Modified sequence Experiment N duplicates Sequence Length Missed cleavages Proteins Leading proteins Gene names Protein names Phospho (STY) All Phospho (STY) Probabilities Max Score Min PEP Intensity Reporter intensity corrected 1 Reporter intensity corrected 2 Reporter intensity corrected 3 Reporter intensity corrected 4 Reporter intensity corrected 5 Reporter intensity corrected 6 Reporter intensity corrected 7 Reporter intensity corrected 8 Reporter intensity corrected 9 Reporter intensity corrected 10 Phosphoproteome Fullproteome TMT Channel Normal 1 TMT Channel Normal 2 TMT Channel Normal 3 TMT Channel Normal 4 TMT Channel Normal 5 TMT Channel Normal 6 TMT Channel Normal 7 TMT Channel Normal 8 TMT Channel Normal 9 TMT Channel Normal 10 TMT Channel Ratio 1 TMT Channel Ratio 2 TMT Channel Ratio 3 TMT Channel Ratio 4 TMT Channel Ratio 5 TMT Channel Ratio 6 TMT Channel Ratio 7 TMT Channel Ratio 8 TMT Channel Ratio 9 TMT Channel Ratio 10 Curve signal Log EC50 Curve slope Curve top Curve bottom R2 Curve RMSE Log EC50 error Curve slope error Curve top error Curve bottom error EC50 pEC50 Curve effect size Regulation (ac)AAAAAAAGDS(ph)DSWDADAFSVEDPVRK ddPTM_A459_MK2206_30min_R1 5 AAAAAAAGDSDSWDADAFSVEDPVRK 26 1 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 AAAAAAAGDS(0.947)DS(0.053)WDADAFSVEDPVRK;AAAAAAAGDS(0.961)DS(0.039)WDADAFSVEDPVRK;AAAAAAAGDS(0.949)DS(0.051)WDADAFSVEDPVRK;AAAAAAAGDS(0.951)DS(0.049)WDADAFSVEDPVRK;AAAAAAAGDS(0.5)DS(0.5)WDADAFSVEDPVRK 113.78 1.22E-21 34010300 3608.39 3371.23 3304.86 2933.65 3150.51 3124.45 3434.5 3393.87 2954.79 2535.71 TRUE FALSE 3301.477482 3151.762314 3080.535311 3159.600231 3025.018515 3301.353659 3205.390772 3364.197752 3261.950994 2849.852898 1.158472946 1.105938596 1.080945375 1.108688885 1.061464792 1.158429497 1.12475657 1.180481194 1.144603287 1 11.47667174 -6.780793018 24.99944768 1.133128077 1.102339125 0.007565294 0.05112731 661.4808816 854441.9963 0.0171252 0.01512496 1.66E-07 6.780793018 -0.030788952 (ac)AAADGDDSLYPIAVLIDELR ddPTM_A459_MK2206_30min_R1 1 AAADGDDSLYPIAVLIDELR 20 0 C9J9C1;P30153;M0QXG4;M0R0K6 C9J9C1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform 0 89.541 0.00087704 0 0 0 0 0 0 68.056 0 0 0 0 FALSE TRUE 0 0 0 0 0 71.90927191 0 0 0 0 0 (ac)AAAS(ph)PLRDCQAWK ddPTM_A459_MK2206_30min_R2 1 AAASPLRDCQAWK 13 1 F8WBU8;A9UJP8;Q5R3I4 F8WBU8 TTC38 Tetratricopeptide repeat protein 38 1 AAAS(1)PLRDCQAWK 76.17 0.014035 4211100 8215.9 12997 7682.1 10988 9796.2 8022.3 14841 8097.6 9703.6 10600 TRUE FALSE 8844.915621 12351.58788 7938.21738 10090.24525 9411.551966 8327.594248 12892.35887 9155.984123 10547.60159 10254.12287 0.862571644 1.204548457 0.774148845 0.984018368 0.917831012 0.812121559 1.25728539 0.892907589 1.028620558 1 13.32391647 (ac)AAAS(ph)VTPPGSLELLQPGFSK ddPTM_A459_MK2206_30min_R1 1 AAASVTPPGSLELLQPGFSK 20 0 B1AMX7;B1AMX8;Q12933-4;Q12933-3;Q12933;B1AMY1;Q12933-2 B1AMX7 TRAF2 TNF receptor-associated factor 2 1 AAAS(0.994)VT(0.006)PPGSLELLQPGFSK 148.91 1.05E-08 0 1089 1172 1136.2 1050.4 1164.8 1423.1 1239.5 1095.3 933.86 844.8 TRUE FALSE 996.3748314 1095.702587 1059.07791 1131.30199 1118.403549 1503.674692 1156.815217 1085.723908 1030.938089 949.4602019 1.049411897 1.154026872 1.115452662 1.191521233 1.177936208 1.583715346 1.218392529 1.143517027 1.085814958 1 9.890963719 -5.860152717 2.251660674 1.226918466 1.106138128 0.065458642 0.146114926 0.755985997 7.807004228 0.046919866 0.081316337 1.38E-06 5.860152717 -0.120780338 (ac)AAAS(ph)VTPPGSLELLQPGFSK ddPTM_A459_MK2206_30min_R2 1 AAASVTPPGSLELLQPGFSK 20 0 B1AMX7;B1AMX8;Q12933-4;Q12933-3;Q12933;B1AMY1;Q12933-2 B1AMX7 TRAF2 TNF receptor-associated factor 2 1 AAAS(0.5)VT(0.5)PPGS(0.001)LELLQPGFSK 80.632 0.009693 2550700 13208 19260 19278 21129 24093 20648 22728 18661 19585 20968 TRUE FALSE 14219.21464 18303.57641 19920.7189 19402.69311 23146.98776 21433.77411 19743.7863 21100.05677 21288.4679 20283.81588 0.701012804 0.902373425 0.982099178 0.956560305 1.141155486 1.056693387 0.973376332 1.040240993 1.049529735 1 14.30804146 -4.176355254 0.923434423 1.038207118 2.66E-11 0.822546229 0.047130025 2.277432655 0.696966398 0.016360815 3.102683901 6.66E-05 4.176355254 -1.038207118 (ac)AAASVT(ph)PPGSLELLQPGFSK ddPTM_A459_MK2206_30min_R1 1 AAASVTPPGSLELLQPGFSK 20 0 B1AMX7;B1AMX8;Q12933-4;Q12933-3;Q12933;B1AMY1;Q12933-2 B1AMX7 TRAF2 TNF receptor-associated factor 2 1 AAAS(0.155)VT(0.845)PPGSLELLQPGFSK 117.2 5.73E-05 1391600 859.97 693.73 770.25 554.64 767.31 606.5 476.35 720.59 609.36 429.13 TRUE FALSE 786.8250356 648.5680509 717.967576 597.3584689 736.7464179 640.8395059 444.5735606 714.2899576 672.7051526 482.2938642 1.631422446 1.344757002 1.48865169 1.238577791 1.527588204 1.328732446 0.921789792 1.481026425 1.394803464 1 8.913768646 -7.000541204 24.91060785 1.223171988 1.431064954 0.283346786 0.182718282 29.27304562 1347457.235 0.064367922 0.056127874 9.99E-08 7.000541204 0.207892966 (ac)AADVSVTHRPPLS(ph)PK ddPTM_A459_MK2206_30min_R1 1 AADVSVTHRPPLSPK 15 1 A0A087WZ13;Q8IY67-2;Q8IY67;Q8IY67-3 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 AADVS(0.002)VT(0.021)HRPPLS(0.977)PK 63.546 0.0086702 84917000 4102 2609.1 3629 2890 3187.4 3032.3 3688.7 3576 2633.1 2537.5 TRUE FALSE 3753.10336 2439.247116 3382.673591 3112.588301 3060.439109 3203.986206 3442.633553 3544.735409 2906.820168 2851.864657 1.316017347 0.855316577 1.186126972 1.091422166 1.073136168 1.123470638 1.2071518 1.242953588 1.019270028 1 11.4776898 -6.989443516 18.98713292 1.141550021 1.094776232 0 0.128330877 54.51523745 98040.72213 0.042942641 0.037752257 1.02E-07 6.989443516 -0.046773788 (ac)AAGGAAPETPAIS(ph)PSKR ddPTM_A459_MK2206_30min_R1 2 AAGGAAPETPAISPSKR 17 1 H0YNW5;H0YMM5 H0YNW5 DUT 1 AAGGAAPET(0.176)PAIS(0.636)PS(0.188)KR;AAGGAAPET(0.001)PAIS(0.923)PS(0.076)KR 105.19 0.00080508 13091400 3266 3586.9 3554.3 2972.1 3273 2671.1 2999 3312.4 2958.1 2480.85 TRUE FALSE 2988.20955 3353.392158 3313.044019 3201.011657 3142.629479 2822.335374 2798.942182 3283.440036 3265.605081 2788.196427 1.071735664 1.202710155 1.188239102 1.148058159 1.127119111 1.012244097 1.003854016 1.177621492 1.1712249 1 11.44511649 -6.531884568 24.72283772 1.078648445 1.156147244 0.240368942 0.06704038 284.6553545 781431.1754 0.023459553 0.023495074 2.94E-07 6.531884568 0.077498798 (ac)AAGGAAPETPAIS(ph)PSKR ddPTM_A459_MK2206_30min_R2 1 AAGGAAPETPAISPSKR 17 1 H0YNW5;H0YMM5 H0YNW5 DUT 1 AAGGAAPET(0.039)PAIS(0.787)PS(0.175)KR 64.327 0.0042015 10424000 31746 52919 40913 41367 45631 43977 43571 35179 38007 34963 TRUE FALSE 34176.49817 50291.11941 42277.019 37987.18377 43839.29766 45650.57555 37850.07536 39777.01609 41312.78016 33822.16017 1.010476504 1.486928072 1.249979859 1.123144813 1.296170837 1.34972383 1.119091009 1.176063737 1.221470774 1 15.04568119 -9.433055262 0.437911353 0.970595579 1.256537183 0.226921193 0.126131207 5.50245448 1.46008096 0.424553901 0.075498056 3.69E-10 9.433055262 0.285941604 (ac)AAGGDHGS(ph)PDSYR ddPTM_A459_MK2206_30min_R1 2 AAGGDHGSPDSYR 13 0 B4DEP1;A0A1W2PRX2;A0A096LP72;A0A096LNY4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;A0A1B0GWJ0;A0A1B0GTJ7;A0A0A6YY92;P30566-2;P30566 B4DEP1 ADSL Adenylosuccinate lyase 1 AAGGDHGS(0.891)PDS(0.109)YR;AAGGDHGS(0.929)PDS(0.071)YR 124.48 1.08E-08 13165900 232.146 561.92 365.93 430.45 298.83 424.95 340.63 432.11 244.25 430.27 TRUE FALSE 212.4007637 525.3389059 341.0916911 463.6033336 286.9269683 449.0103018 317.9071942 428.3321078 269.6406616 483.575096 0.439230154 1.086364683 0.70535413 0.958699771 0.593345213 0.928522386 0.657410187 0.885761304 0.557598321 1 8.917596138 (ac)AAGGDHGS(ph)PDSYR ddPTM_A459_MK2206_30min_R2 1 AAGGDHGSPDSYR 13 0 B4DEP1;A0A1W2PRX2;A0A096LP72;A0A096LNY4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;A0A1B0GWJ0;A0A1B0GTJ7;A0A0A6YY92;P30566-2;P30566 B4DEP1 ADSL Adenylosuccinate lyase 1 AAGGDHGS(0.851)PDS(0.149)YR 83.869 0.00011365 2851500 0 986.88 0 0 0 1036.2 0 0 0 0 TRUE FALSE 0 937.8729743 0 0 0 1075.633317 0 0 0 0 0 (ac)AALGHLAGEAAAAPGPGT(ph)PCASR ddPTM_A459_MK2206_30min_R1 4 AALGHLAGEAAAAPGPGTPCASR 23 0 A0A3B3IRR6;A0A3B3IT54;A0A3B3ITA3;Q9H7E9;Q9H7E9-2 A0A3B3IRR6 C8orf33 UPF0488 protein C8orf33 1 AALGHLAGEAAAAPGPGT(0.998)PCAS(0.002)R;AALGHLAGEAAAAPGPGT(0.999)PCAS(0.001)R;AALGHLAGEAAAAPGPGT(0.999)PCAS(0.001)R;AALGHLAGEAAAAPGPGT(0.996)PCAS(0.004)R 178.45 8.16E-65 76485000 64.957 238.63 226.281 162.407 94.471 187.22 121.208 206.206 150.06 235.121 TRUE FALSE 59.43206605 223.0951436 210.9216762 174.9156153 90.70802002 197.8202346 113.1224355 204.4031627 165.659274 264.2495646 0.224908851 0.844259267 0.798191197 0.66193341 0.343266488 0.748611393 0.428089392 0.773523177 0.626904624 1 8.045757284 -9.202090174 0.92120245 1.002132556 0.604550413 0.269039098 0.197130403 4.015437294 4.301620886 0.208383656 0.061233783 6.28E-10 9.202090174 -0.397582144 (ac)AALGHLAGEAAAAPGPGT(ph)PCASR ddPTM_A459_MK2206_30min_R2 2 AALGHLAGEAAAAPGPGTPCASR 23 0 A0A3B3IRR6;A0A3B3IT54;A0A3B3ITA3;Q9H7E9;Q9H7E9-2 A0A3B3IRR6 C8orf33 UPF0488 protein C8orf33 1 AALGHLAGEAAAAPGPGT(0.985)PCAS(0.015)R;AALGHLAGEAAAAPGPGT(0.988)PCAS(0.012)R 72.513 7.12E-05 26733800 933.52 2987.3 2451.6 760.41 0 838.8 0 0 0 1172.5 TRUE FALSE 1004.991009 2838.955026 2533.33512 698.2820706 0 870.7211218 0 0 0 1134.241421 0.886046824 2.502954815 2.233506089 0.615637956 0 0.767668246 0 0 0 1 10.14751203 -5.861291154 4.814669639 0.259757796 1.931848327 0.655723563 0.511430953 0.115019707 4.440129948 0.142355467 0.217561189 1.38E-06 5.861291154 1.672090531 (ac)AALHTTPDS(ph)PAAQLER ddPTM_A459_MK2206_30min_R1 4 AALHTTPDSPAAQLER 16 0 A6NFI3 A6NFI3 ZNF316 Zinc finger protein 316 1 AALHTT(0.001)PDS(0.998)PAAQLER;AALHT(0.001)T(0.005)PDS(0.994)PAAQLER;AALHT(0.032)T(0.169)PDS(0.8)PAAQLER;AALHT(0.001)T(0.01)PDS(0.99)PAAQLER 154.51 7.02E-40 60783000 1835.14 1536.372 1878.76 1582.43 1933.75 1855.52 1988.059 2596.17 1481.848 1314.05 TRUE FALSE 1679.051706 1436.353904 1751.235006 1704.309033 1856.724643 1960.577939 1855.439212 2573.471959 1635.891402 1476.844435 1.136918464 0.972583076 1.185795176 1.15402069 1.257224254 1.327545334 1.256353864 1.742547759 1.107693786 1 10.52830215 -6.112311591 1.197635877 1.33392685 1.066142422 0.150187421 0.189290109 0.689144814 2.019630432 0.071853545 0.122747323 7.72E-07 6.112311591 -0.267784429 (ac)AALHTTPDS(ph)PAAQLER ddPTM_A459_MK2206_30min_R2 4 AALHTTPDSPAAQLER 16 0 A6NFI3 A6NFI3 ZNF316 Zinc finger protein 316 1 AALHT(0.029)T(0.005)PDS(0.966)PAAQLER;AALHT(0.006)T(0.003)PDS(0.991)PAAQLER;AALHT(0.055)T(0.029)PDS(0.916)PAAQLER;AALHT(0.079)T(0.041)PDS(0.88)PAAQLER 125.86 1.24E-29 94312000 16459.7 21522.5 17626.2 19802.3 24264.9 22991.1 26260.4 18366.6 12395.1 20802.4 TRUE FALSE 17719.86729 20453.72395 18213.84871 18184.38875 23312.1381 23866.04242 22812.37794 20767.17768 13473.20339 20123.61939 0.880550707 1.016403836 0.905098052 0.903634102 1.158446582 1.185971666 1.133612075 1.031980246 0.669521875 1 14.29660219 -4.759718693 23.32520836 1.010398387 0.880550373 0.055061309 0.143951172 62.90646397 852111.1046 0.037833158 0.233475561 1.74E-05 4.759718693 -0.129848014 (ac)AAPEEHDS(ph)PTEASQPIVEEEETK ddPTM_A459_MK2206_30min_R1 2 AAPEEHDSPTEASQPIVEEEETK 23 0 F5H1N9;Q9H0S4-2;Q9H0S4 F5H1N9 DDX47 Probable ATP-dependent RNA helicase DDX47 1 AAPEEHDS(0.648)PT(0.151)EAS(0.201)QPIVEEEETK;AAPEEHDS(0.777)PT(0.122)EAS(0.1)QPIVEEEETK 57.806 6.29E-07 27655000 5872.5 6087.9 5496.8 5256.3 4958 4178.3 4766.3 5400.2 4915.4 4905.4 TRUE FALSE 5373.013037 5691.576603 5123.692531 5661.141137 4760.512361 4414.871735 4448.348824 5352.986621 5426.37342 5513.117986 0.974586985 1.032369817 0.929363845 1.026849262 0.863488206 0.800793987 0.806866248 0.970954482 0.984265788 1 12.42865276 -6.264356312 24.9841745 0.892886042 0.989374529 0.255986524 0.070523635 350.5019129 3002125.094 0.023006265 0.0272392 5.44E-07 6.264356312 0.096488487 (ac)AASAAAAS(ph)AAAASAASGSPGPGEGSAGGEKR ddPTM_A459_MK2206_30min_R2 1 AASAAAASAAAASAASGSPGPGEGSAGGEKR 31 1 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 AAS(0.013)AAAAS(0.796)AAAAS(0.149)AAS(0.039)GS(0.003)PGPGEGSAGGEKR 77.51 2.06E-18 34485000 9657.8 14898 11578 16693 16182 16412 14402 10803 12839 16763 TRUE FALSE 10397.20859 14158.18698 11964.00474 15329.1285 15546.61337 17036.57016 12511.0001 12214.98919 13955.71301 16216.02468 0.64116877 0.87309851 0.737789007 0.945307423 0.958719148 1.050600902 0.771520785 0.753266564 0.860612467 1 13.98513257 -4.109662742 1.098737545 0.888405519 1.02E-12 0.342683081 0.100989892 8.377513371 2.918625341 0.033241303 12.36002183 7.77E-05 4.109662742 -0.888405519 (ac)AASAAAASAAAASAAS(ph)GSPGPGEGSAGGEKR ddPTM_A459_MK2206_30min_R1 4 AASAAAASAAAASAASGSPGPGEGSAGGEKR 31 1 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 AASAAAAS(0.004)AAAAS(0.264)AAS(0.436)GS(0.297)PGPGEGSAGGEKR;AASAAAAS(0.002)AAAAS(0.029)AAS(0.963)GS(0.006)PGPGEGSAGGEKR;AASAAAAS(0.001)AAAAS(0.002)AAS(0.592)GS(0.404)PGPGEGS(0.001)AGGEKR;AASAAAASAAAAS(0.003)AAS(0.551)GS(0.446)PGPGEGSAGGEKR 120.18 3.19E-24 513697000 8974.8 8869.4 9475.3 7991.5 10083.7 8246.6 8190.3 9756.2 7228.9 6161.2 TRUE FALSE 8211.446131 8292.000448 8832.143036 8607.006715 9682.044876 8713.515365 7643.940031 9670.902572 7980.370024 6924.495971 1.185854706 1.197487945 1.275492552 1.242979525 1.398230993 1.258360955 1.103898401 1.396621879 1.152483886 1 12.75749335 -8.529944397 23.61535076 0.999999994 1.256323037 0.470891518 0.084871626 354.4016834 1184510.387 0.081041893 0.020924927 2.95E-09 8.529944397 0.256323043 (ac)AASAAAASAAAASAAS(ph)GSPGPGEGSAGGEKR ddPTM_A459_MK2206_30min_R2 2 AASAAAASAAAASAASGSPGPGEGSAGGEKR 31 1 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 AASAAAASAAAAS(0.003)AAS(0.84)GS(0.157)PGPGEGSAGGEKR;AASAAAAS(0.215)AAAAS(0.018)AAS(0.63)GS(0.136)PGPGEGS(0.001)AGGEKR 92.48 1.16E-18 255443000 126730 172508 135397 168760 187152 159098 168312 130471 145654 141580 TRUE FALSE 136432.5462 163941.5036 139911.0684 154971.7682 179803.4721 165152.5859 146212.4322 147524.0077 158322.7216 136960.2562 0.996146985 1.197000562 1.021545025 1.131509041 1.312814952 1.205843144 1.067553729 1.077130051 1.155975653 1 17.06339778 -9.643963709 0.71563005 0.994226336 1.136140417 0.152126794 0.090127935 13.07017778 6.532297296 0.321007102 0.03391909 2.27E-10 9.643963709 0.141914081 (ac)AASAAAASAAAASAASGS(ph)PGPGEGSAGGEK ddPTM_A459_MK2206_30min_R2 2 AASAAAASAAAASAASGSPGPGEGSAGGEK 30 0 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 AASAAAAS(0.039)AAAAS(0.006)AAS(0.016)GS(0.94)PGPGEGSAGGEK;AASAAAAS(0.007)AAAAS(0.012)AAS(0.114)GS(0.867)PGPGEGSAGGEK 97.608 3.70E-19 13980700 48832 45078 41710 44576 39398 35957 55657 43492 34252 46215 TRUE FALSE 52570.61547 42839.49207 43100.59058 40933.99821 37851.03656 37325.36883 48349.16904 49176.55373 37231.17705 44707.00833 1.175892045 0.958227662 0.964067876 0.915605846 0.846646599 0.834888538 1.081467332 1.099974155 0.83278167 1 15.44821339 -4.759987589 5.311464252 0.94745174 1.188503146 0.365341009 0.090142898 0.192795119 16.02882183 0.023884558 0.172266635 1.74E-05 4.759987589 0.241051406 (ac)AASAAAASAAAASAASGS(ph)PGPGEGSAGGEKR ddPTM_A459_MK2206_30min_R1 2 AASAAAASAAAASAASGSPGPGEGSAGGEKR 31 1 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 AASAAAAS(0.008)AAAAS(0.202)AAS(0.119)GS(0.671)PGPGEGSAGGEKR;AASAAAAS(0.001)AAAAS(0.052)AAS(0.051)GS(0.875)PGPGEGS(0.021)AGGEKR 105.38 2.62E-20 329236000 5366.8 6034.3 5698.6 5503.9 5623.7 5220.7 5172 5186.2 4133.8 3622.3 TRUE FALSE 4910.325478 5641.465973 5311.794909 5927.811332 5399.696121 5516.291522 4826.985317 5140.8576 4563.523303 4071.057871 1.206154674 1.385749393 1.30477018 1.456086236 1.326361917 1.355001991 1.185683297 1.262781754 1.120967436 1 11.99118801 -8.247690938 0.791440802 1.002114188 1.34560039 0.708593531 0.06935283 0.318059254 0.432077807 0.064601254 0.025242456 5.65E-09 8.247690938 0.343486203 (ac)AASAAAASAAAASAASGS(ph)PGPGEGSAGGEKR ddPTM_A459_MK2206_30min_R2 4 AASAAAASAAAASAASGSPGPGEGSAGGEKR 31 1 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 AASAAAASAAAASAAS(0.001)GS(0.997)PGPGEGS(0.001)AGGEKR;AASAAAASAAAASAAS(0.186)GS(0.812)PGPGEGS(0.002)AGGEKR;AASAAAASAAAASAAS(0.32)GS(0.676)PGPGEGS(0.003)AGGEKR;AASAAAAS(0.041)AAAAS(0.036)AAS(0.226)GS(0.69)PGPGEGS(0.006)AGGEKR 139.82 3.93E-40 311297500 95601.1 135489 117371.9 143147.2 136934.4 127712.4 144985.1 102574.5 127192.9 126264.8 TRUE FALSE 102920.3937 128760.8133 121285.0206 131451.6159 131557.6674 132572.5849 125948.3822 115981.3393 138255.9085 122144.7899 0.842609773 1.054165416 0.992961064 1.07619503 1.077063275 1.085372409 1.031140029 0.9495398 1.131901808 1 16.8982328 -4.759674084 24.91519532 1.043977764 0.84260951 0.591242231 0.050299735 30.38734255 428754.9494 0.012218288 0.076162105 1.74E-05 4.759674084 -0.201368254 (ac)ACGLVAS(ph)NLNLKPGECLR ddPTM_A459_MK2206_30min_R2 2 ACGLVASNLNLKPGECLR 18 1 P09382;F8WEI7 P09382 LGALS1 Galectin-1 1 ACGLVAS(1)NLNLKPGECLR;ACGLVAS(1)NLNLKPGECLR 110.04 9.86E-10 5621300 9531.7 13040.7 8408.7 13668.7 11832.6 8796.9 13200.7 10674.7 7435.5 11587.4 TRUE FALSE 10261.45428 12393.1178 8689.041861 12551.92349 11367.99267 9131.672194 11467.43223 12069.91994 8082.22635 11209.30409 0.915440798 1.105609921 0.775163364 1.11977723 1.014156863 0.814651126 1.023028026 1.076776921 0.721028378 1 13.45240909 (ac)ACS(ph)PDAVVSPSSAFLR ddPTM_A459_MK2206_30min_R2 3 ACSPDAVVSPSSAFLR 16 0 Q93100-4;Q93100-2;I3L3F2;H3BV13;H3BQ89 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 ACS(0.999)PDAVVSPSS(0.001)AFLR;ACS(1)PDAVVSPSSAFLR;ACS(1)PDAVVSPSSAFLR 99.069 0.00094638 9161330 3197.8 0 1722.63 2119.28 2642.15 2044.36 1107.8 741.09 1342.5 2023.15 TRUE FALSE 3442.626027 0 1780.061624 1946.128045 2538.405915 2122.159552 962.3445293 837.9530075 1459.268223 1957.134781 1.759013257 0 0.909524291 0.994376097 1.297001075 1.084319574 0.491710913 0.428152938 0.745614578 1 10.9345274 -7.260211281 24.98470778 0.618715682 0.969709291 0.120876619 0.43609041 240.8890993 4900767.041 0.171380501 0.125269116 5.49E-08 7.260211281 0.350993609 (ac)ADANKAEVPGAT(ph)GGDSPHLQPAEPPGEPR ddPTM_A459_MK2206_30min_R1 4 ADANKAEVPGATGGDSPHLQPAEPPGEPR 29 1 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;A0A087WWC8;Q9P2K5-4 A0A0A0MQW0 MYEF2 Myelin expression factor 2 1 ADANKAEVPGAT(0.926)GGDS(0.074)PHLQPAEPPGEPR;ADANKAEVPGAT(0.808)GGDS(0.192)PHLQPAEPPGEPR;ADANKAEVPGAT(0.847)GGDS(0.153)PHLQPAEPPGEPR;ADANKAEVPGAT(0.958)GGDS(0.042)PHLQPAEPPGEPR 86.004 5.08E-16 198545000 11766.1 11384.3 11991.8 12975.2 13188.8 9460.4 10049.8 13377.9 7400.6 4295.33 TRUE FALSE 10765.33141 10643.18 11177.83003 13974.55215 12663.46217 9996.039672 9379.396179 13260.93843 8169.918853 4827.467908 2.230016152 2.20471274 2.315464388 2.894799596 2.623210016 2.070658959 1.942922533 2.746975989 1.692381805 1 12.23705095 -8.522984652 4.422521181 1.001544117 2.368164845 0.705650158 0.284407463 0.094167324 6.095736023 0.291212993 0.076033744 3.00E-09 8.522984652 1.366620727 (ac)ADANKAEVPGAT(ph)GGDSPHLQPAEPPGEPR ddPTM_A459_MK2206_30min_R2 4 ADANKAEVPGATGGDSPHLQPAEPPGEPR 29 1 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;A0A087WWC8;Q9P2K5-4 A0A0A0MQW0 MYEF2 Myelin expression factor 2 1 ADANKAEVPGAT(0.601)GGDS(0.399)PHLQPAEPPGEPR;ADANKAEVPGAT(0.849)GGDS(0.151)PHLQPAEPPGEPR;ADANKAEVPGAT(0.88)GGDS(0.12)PHLQPAEPPGEPR;ADANKAEVPGAT(0.5)GGDS(0.5)PHLQPAEPPGEPR 63.095 1.04E-10 193934000 65203.9 150800 109706 151769 174356 153817 149363 104166 150498 99379 TRUE FALSE 70195.96072 143311.4913 113363.5433 139368.9872 167509.9074 159670.6137 129751.4587 117780.8539 163588.044 96136.27137 0.730171451 1.490711978 1.179196381 1.44970244 1.742421513 1.660877954 1.349661858 1.225144809 1.701626677 1 16.55279323 -4.758828805 24.99831615 1.4376574 0.730170513 0.448809203 0.229477497 65.21270531 624337.8702 0.056691354 0.377013596 1.74E-05 4.758828805 -0.707486887 (ac)ADAWEEIRR ddPTM_A459_MK2206_30min_R2 1 ADAWEEIRR 9 1 O94874;O94874-3 O94874 UFL1 E3 UFM1-protein ligase 1 0 72.485 0.048174 1436600 2260.5 3894.1 3396.9 3987.5 2889.9 3222.9 3785.9 2767.8 3639 3158.9 FALSE TRUE 2433.565618 3700.724657 3510.150951 3661.708495 2776.428005 3345.549718 3288.806782 3129.560963 3955.513642 3055.825352 0.79636934 1.21103932 1.14867525 1.198271522 0.908568942 1.094810512 1.076241736 1.024129524 1.294417444 1 11.57734638 (ac)ADEAALALQPGGS(ph)PSAAGADR ddPTM_A459_MK2206_30min_R1 4 ADEAALALQPGGSPSAAGADR 21 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 ADEAALALQPGGS(0.95)PS(0.05)AAGADR;ADEAALALQPGGS(0.817)PS(0.183)AAGADR;ADEAALALQPGGS(0.979)PS(0.021)AAGADR;ADEAALALQPGGS(0.954)PS(0.046)AAGADR 169.77 6.87E-60 70109800 603.3 774.056 685.333 518.9 849.49 493.32 612.01 531.495 638.69 495.277 TRUE FALSE 551.9861669 723.6648137 638.8145054 558.8657679 815.6530145 521.2513521 571.1839296 526.8481953 705.0841111 556.6356539 0.991647163 1.3000691 1.147634904 1.004006416 1.465326572 0.936431844 1.026136083 0.946486614 1.266688733 1 9.12058951 (ac)ADEAALALQPGGS(ph)PSAAGADR ddPTM_A459_MK2206_30min_R2 2 ADEAALALQPGGSPSAAGADR 21 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 ADEAALALQPGGS(0.763)PS(0.237)AAGADR;ADEAALALQPGGS(0.714)PS(0.286)AAGADR 109.42 1.57E-16 41022600 0 3675.7 896.66 3808.3 1310.9 1165.3 2454.97 1335.7 0 1447.7 TRUE FALSE 0 3493.170083 926.5541969 3497.149708 1259.427479 1209.646308 2132.62949 1510.280576 0 1400.461668 0 2.494298961 0.661606253 2.497140614 0.899294503 0.863748245 1.522804615 1.078416219 0 1 10.45168678 -8.051717454 7.41968012 0.505563377 1.31589848 0.136708553 0.76582115 0.495413612 61.65904633 0.476674859 0.181213699 8.88E-09 8.051717454 0.810335103 (ac)ADEAALALQPGGSPS(ph)AAGADREAASSPAGEPLR ddPTM_A459_MK2206_30min_R1 1 ADEAALALQPGGSPSAAGADREAASSPAGEPLR 33 1 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 ADEAALALQPGGS(0.017)PS(0.983)AAGADREAASSPAGEPLR 57.328 1.60E-08 8247600 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)ADEELEALRR ddPTM_A459_MK2206_30min_R1 1 ADEELEALRR 10 1 O14737;Q3HM38;X6R2P6;K7ESJ4;O14737-2 O14737 PDCD5 Programmed cell death protein 5 0 69.628 0.037421 11780000 747.93 1082.6 1013.2 871.19 815.54 958.25 825.91 750.28 965.22 808.14 FALSE TRUE 684.314626 1012.122543 944.4268069 938.2892048 783.0553149 1012.505287 770.8150509 743.7203811 1065.558073 908.2584843 0.753435985 1.114355176 1.039821618 1.033064068 0.862150289 1.11477658 0.848673659 0.818842206 1.17318813 1 9.826959127 (ac)ADEELEALRR ddPTM_A459_MK2206_30min_R2 2 ADEELEALRR 10 1 O14737;Q3HM38;X6R2P6;K7ESJ4;O14737-2 O14737 PDCD5 Programmed cell death protein 5 0 ; 84.476 0.011696 35915000 16654.1 19391.3 10644.9 17512 19559.8 20469.1 28286 11027.1 16959.6 16338.9 FALSE TRUE 17929.1507 18428.35624 10999.79565 16081.21358 18791.78397 21248.06594 24572.01422 12468.37983 18434.71535 15805.76303 1.134342623 1.16592639 0.695935757 1.017427223 1.188919759 1.34432396 1.554623726 0.788850232 1.166328719 1 13.94816306 -6.240528976 5.836676996 1.1912109 0.991741053 0.120690339 0.222059964 0.370595793 45.86991769 0.070339782 0.088219684 5.75E-07 6.240528976 -0.199469847 (ac)ADELS(ph)EK ddPTM_A459_MK2206_30min_R1 1 ADELSEK 7 0 C9JKI3;Q03135-2 C9JKI3 CAV1 Caveolin;Caveolin-1 1 ADELS(1)EK 112.11 0.0010786 16924000 12762 16666 11297 10318 10483 10029 13476 12638 20031 19170 TRUE FALSE 11676.52488 15581.04037 10530.19112 11112.69415 10065.43991 10596.83331 12577.04063 12527.5073 22113.29413 21544.92433 0.54196175 0.723188447 0.488755075 0.515791747 0.467183814 0.491848249 0.583758868 0.581459796 1.026380682 1 14.39506041 -8.242724886 5.206906312 1.01954611 0.546522618 0.879653544 0.068692327 0.055295704 4.720379313 0.057723773 0.018799007 5.72E-09 8.242724886 -0.473023491 (ac)ADELS(ph)EKQVYDAHTK ddPTM_A459_MK2206_30min_R1 1 ADELSEKQVYDAHTK 15 1 C9JKI3;Q03135-2 C9JKI3 CAV1 Caveolin;Caveolin-1 1 ADELS(0.999)EKQVY(0.001)DAHTK 54.094 0.0010761 26757000 7354.9 7432.5 6168.3 8580.7 8879.2 6628.8 5373.5 9993.5 4069.3 1509.3 TRUE FALSE 6729.327133 6948.642899 5749.612982 9241.587001 8525.522662 7004.116928 5015.04362 9906.127883 4492.318297 1696.283479 3.967100557 4.096392488 3.389535449 5.448138308 5.026001119 4.129095765 2.956489103 5.839901177 2.648329925 1 10.72816157 -8.52206933 7.431609122 1.000201671 4.317806548 0.623117334 0.83784228 0.063598274 36.62237035 0.800141854 0.206920457 3.01E-09 8.52206933 3.317604877 (ac)ADGDS(ph)GS(ph)ERGGGGGPCGFQPASR ddPTM_A459_MK2206_30min_R2 1 ADGDSGSERGGGGGPCGFQPASR 23 1 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 2 ADGDS(1)GS(1)ERGGGGGPCGFQPASR 69.878 0.00033524 0 825.79 1123.2 1245.4 1209.5 1278.2 910.58 755.16 1211.3 669.67 2249.3 TRUE FALSE 889.0131173 1067.423521 1286.921014 1110.679981 1228.011446 945.23276 656.0065849 1369.621069 727.9166861 2175.905525 0.408571561 0.490565196 0.591441586 0.510444947 0.564367998 0.434408916 0.301486704 0.629448776 0.33453506 1 11.0874002 -10.8981841 3.320174747 1.004383063 0.479940481 0.706961072 0.101543968 83480191.98 115595149.2 3527375.975 0.025448716 1.26E-11 10.8981841 -0.524442582 (ac)ADGDS(ph)GSERGGGGGPCGFQPASR ddPTM_A459_MK2206_30min_R1 1 ADGDSGSERGGGGGPCGFQPASR 23 1 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 ADGDS(0.5)GS(0.5)ERGGGGGPCGFQPASR 82.529 1.44E-06 7373300 706.53 825.32 961.31 736.07 676.97 703.49 809.25 716.94 625.26 934.3 TRUE FALSE 646.4359134 771.591518 896.0589556 792.7622389 650.0048514 743.3209959 755.2664091 710.6718692 690.2580145 1050.048138 0.615625027 0.734815377 0.853350359 0.754977044 0.61902386 0.707892304 0.719268367 0.676799323 0.657358448 1 10.03623975 -10.7580697 6.285733477 1.000004545 0.70833697 0.639899315 0.066476122 4.52E-06 5.50E-07 0.068728185 0.016668774 1.75E-11 10.7580697 -0.291667575 (ac)ADGDS(ph)GSERGGGGGPCGFQPASR ddPTM_A459_MK2206_30min_R2 1 ADGDSGSERGGGGGPCGFQPASR 23 1 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 ADGDS(0.5)GS(0.5)ERGGGGGPCGFQPASR 64.52 0.00021113 9600700 3704.6 4615.7 3567.7 3748.5 3695.1 4224.2 4063.6 3020.1 2253.6 4717.2 TRUE FALSE 3988.227024 4386.49105 3686.645337 3442.235559 3550.011808 4384.954891 3530.044439 3414.83744 2449.614054 4563.27815 0.87398289 0.96125875 0.807894066 0.754333934 0.777952097 0.960922115 0.773576434 0.748329891 0.536810156 1 12.15585488 -7.506386703 20.57027608 0.737732319 0.851873752 0.108476915 0.122688401 132.9739075 165862.1968 0.051843651 0.033726422 3.12E-08 7.506386703 0.114141433 (ac)ADGDSGS(ph)ERGGGGGPCGFQPASR ddPTM_A459_MK2206_30min_R2 1 ADGDSGSERGGGGGPCGFQPASR 23 1 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 ADGDS(0.417)GS(0.583)ERGGGGGPCGFQPASR 86.214 3.58E-05 11256000 5678 5554.7 5523.3 5863.8 4279.2 6717.1 7945.9 4037.9 4409 7679.4 TRUE FALSE 6112.712046 5278.861675 5707.444065 5384.708783 4111.177107 6972.723947 6902.593785 4565.667394 4792.48685 7428.821807 0.82283735 0.710592044 0.768283883 0.724840213 0.553409035 0.938604281 0.929164 0.614588358 0.645120717 1 12.85891771 -6.77590013 24.99763398 0.807886458 0.719089044 0.140713825 0.131643041 640.3071698 1106862.769 0.04854895 0.043003292 1.68E-07 6.77590013 -0.088797414 (ac)ADGGS(ph)PFLGR ddPTM_A459_MK2206_30min_R2 1 ADGGSPFLGR 10 0 O60504-2;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 ADGGS(1)PFLGR 51.013 0.037919 8203600 29468 45865 35629 58059 45943 83218 31737 34196 55064 25921 TRUE FALSE 31724.09274 43587.41079 36816.85308 53315.39398 44139.04697 86384.9193 27569.89378 38665.53461 59853.36719 25075.19989 1.265158119 1.73826773 1.46825761 2.126220098 1.760267003 3.445034124 1.099488494 1.541983106 2.386954738 1 14.61397358 -5.751264221 24.70174188 1.955275645 1.515331654 0.073597433 0.663567248 488.562738 1186046.722 0.179002296 0.305450365 1.77E-06 5.751264221 -0.43994399 (ac)ADGGS(ph)PFLGRR ddPTM_A459_MK2206_30min_R2 1 ADGGSPFLGRR 11 1 O60504-2;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 ADGGS(1)PFLGRR 80.834 0.027305 7292500 7245.2 8192.1 9611.1 9317.9 9205.2 9666.7 8599.4 6287.7 6139.4 9265.2 TRUE FALSE 7799.898083 7785.292226 9931.529277 8556.597764 8843.757596 10034.57304 7470.28845 7109.523979 6673.393915 8962.877283 0.870244882 0.868615287 1.108073776 0.95467086 0.98670966 1.119570505 0.833469902 0.793218936 0.744559331 1 13.12974623 -7.400356641 9.965524465 0.824059305 0.983646605 0.321413098 0.09956387 0.430608762 33.05289142 0.041927625 0.028232319 3.98E-08 7.400356641 0.1595873 (ac)ADHNPDSDST(ph)PR ddPTM_A459_MK2206_30min_R2 2 ADHNPDSDSTPR 12 0 Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2;H3BQ71 Q96BT3 CENPT Centromere protein T 1 ADHNPDS(0.004)DS(0.239)T(0.756)PR;ADHNPDS(0.001)DS(0.042)T(0.958)PR 97.957 0.0037151 3727500 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)ADHS(ph)FSDGVPSDSVEAAK ddPTM_A459_MK2206_30min_R1 5 ADHSFSDGVPSDSVEAAK 18 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 ADHS(0.994)FS(0.006)DGVPSDSVEAAK;ADHS(0.846)FS(0.154)DGVPSDSVEAAK;ADHS(0.835)FS(0.165)DGVPSDSVEAAK;ADHS(0.995)FS(0.001)DGVPSDS(0.004)VEAAK;ADHS(0.998)FS(0.002)DGVPSDSVEAAK 138.45 6.95E-43 235524000 8798.9 7523.11 8532.1 7316.58 8189.41 6584.42 8346.74 8111.6 6980 6514.07 TRUE FALSE 8050.50735 7033.354172 7952.964824 7880.104259 7863.208458 6957.22417 7789.944204 8040.681136 7705.595978 7321.08217 1.099633519 0.960698707 1.086310007 1.076357849 1.074050021 0.95029997 1.064042722 1.098291339 1.052521444 1 12.8378412 (ac)ADHS(ph)FSDGVPSDSVEAAK ddPTM_A459_MK2206_30min_R2 4 ADHSFSDGVPSDSVEAAK 18 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 ADHS(1)FSDGVPSDSVEAAK;ADHS(0.997)FS(0.003)DGVPSDSVEAAK;ADHS(1)FSDGVPSDSVEAAK;ADHS(0.958)FS(0.042)DGVPSDSVEAAK 144.47 2.81E-28 62121000 76794.6 112671 98237 107377 116034 90312 110466 77151.8 82494.7 108086 TRUE FALSE 82674.05362 107075.922 101512.1725 98603.95562 111477.9221 93748.88644 95961.68151 87235.80516 89669.93989 104559.1627 0.790691619 1.024070194 0.970858698 0.943044618 1.066170762 0.896610914 0.917774005 0.834320044 0.857600019 1 16.67395997 -6.955905242 24.99998907 0.891270085 0.964263194 0.111479032 0.078412042 239.0209904 135514.7312 0.026790046 0.023626587 1.11E-07 6.955905242 0.07299311 (ac)ADHSFS(ph)DGVPSDSVEAAK ddPTM_A459_MK2206_30min_R1 2 ADHSFSDGVPSDSVEAAK 18 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 ADHS(0.304)FS(0.696)DGVPSDSVEAAK;ADHS(0.05)FS(0.949)DGVPS(0.001)DSVEAAK 132.44 3.62E-13 6235200 1679.6 1562.05 1581.15 1509.27 1718.21 1589.52 1733.31 1633.84 1306.19 1364.58 TRUE FALSE 1536.7412 1460.360261 1473.825943 1625.514237 1649.770057 1679.517249 1617.684053 1619.555509 1441.973125 1533.634472 1.002025729 0.952221854 0.961002097 1.05990982 1.075725727 1.09512226 1.05480418 1.056024456 0.940232598 1 10.58273896 -5.759568628 24.99974074 1.04696391 0.969797075 0.340251497 0.042988068 50.91597816 680390.6639 0.012146738 0.019741706 1.74E-06 5.759568628 -0.077166835 (ac)ADHSFS(ph)DGVPSDSVEAAK ddPTM_A459_MK2206_30min_R2 2 ADHSFSDGVPSDSVEAAK 18 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 ADHS(0.043)FS(0.909)DGVPS(0.002)DS(0.046)VEAAK;ADHS(0.17)FS(0.69)DGVPS(0.016)DS(0.124)VEAAK 86.777 5.52E-06 68440900 41917 49708 45555 46997 56696 58213 53036 44710 49919 52542 TRUE FALSE 45126.19775 47239.573 47073.78096 43157.19476 54469.83017 60428.33651 46072.30949 50553.75051 54260.86439 50827.55884 0.887829335 0.929408653 0.9261468 0.849090449 1.071659379 1.188889214 0.906443483 0.994612995 1.06754811 1 15.63332332 -6.266692649 24.98840611 1.038870264 0.902355796 0.485837522 0.070537775 412.1903781 1960677.151 0.022798112 0.026611292 5.41E-07 6.266692649 -0.136514468 (ac)ADKPDMGEIAS(ph)FDK ddPTM_A459_MK2206_30min_R2 2 ADKPDMGEIASFDK 14 1 P63313 P63313 TMSB10 Thymosin beta-10 1 ADKPDMGEIAS(1)FDK;ADKPDMGEIAS(1)FDK 82.578 0.007381 0 23999.1 27889 26628 22810 24910 15799.3 31659 23675 20006.4 26463 TRUE FALSE 25836.48955 26504.07281 27515.76423 20946.35003 23931.90824 16400.55343 27502.13527 26769.40379 21746.52051 25599.51448 1.009257014 1.03533498 1.074854926 0.818232317 0.934857896 0.640658769 1.074322534 1.045699668 0.849489569 1 14.64382883 -5.746286421 24.98361674 0.907721705 1.0393676 0.203013159 0.118722218 402.8569649 664209.6252 0.033159082 0.057152258 1.79E-06 5.746286421 0.131645895 (ac)ADKPDMGEIASFDK ddPTM_A459_MK2206_30min_R1 2 ADKPDMGEIASFDK 14 1 P63313 P63313 TMSB10 Thymosin beta-10 0 ; 101.35 0.00022812 45401000 7165.9 6609.7 7450 7380.1 7551 6248.1 6762.7 7135.2 5799.1 6212.6 FALSE TRUE 6556.402575 6179.407329 6944.314757 7948.516581 7250.22768 6601.862022 6311.572622 7072.817699 6401.937197 6982.263791 0.939008146 0.885014877 0.994564938 1.138386749 1.038377795 0.945518849 0.903943594 1.012969133 0.91688561 1 12.76947915 -10.15583059 15.05469198 1 0.977728939 0.009564125 0.07161942 0 0 0.075931359 0.01841606 6.99E-11 10.15583059 -0.022271061 (ac)ADKPDMGEIASFDK ddPTM_A459_MK2206_30min_R2 2 ADKPDMGEIASFDK 14 1 P63313 P63313 TMSB10 Thymosin beta-10 0 ; 110.93 0.00025884 45518000 159207 178789 181779 199663 199421 153663 223320 158511 174504 190950 FALSE TRUE 171396.0103 169910.5982 187839.4211 183349.8942 191590.7295 159510.7531 193997.8157 179228.9319 189682.0425 184719.3171 0.927872693 0.919831238 1.016891054 0.992586466 1.037199208 0.86353044 1.050230256 0.970277147 1.026866304 1 17.49497522 -5.250458399 24.40054973 0.992377362 0.92385195 0.247181601 0.0493222 737.8493603 1639544.086 0.012077756 0.031287998 5.62E-06 5.250458399 -0.068525412 (ac)ADKT(ph)PGGSQK ddPTM_A459_MK2206_30min_R2 1 ADKTPGGSQK 10 1 O15042-2;O15042;C9J5L1;E7EW00;E7ET15 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 ADKT(0.988)PGGS(0.012)QK 69.65 0.019715 11909000 164110 98572 107990 101250 159790 74683 143730 206910 146820 182240 TRUE FALSE 176674.3878 93677.05782 111590.3327 92977.55112 153515.8417 77525.1139 124858.0783 233953.8474 159590.1382 176293.5237 1.002160397 0.531369819 0.632980329 0.527401967 0.870796831 0.439750209 0.708239734 1.327070005 0.905252416 1 17.42761995 -7.650260875 7.449075426 1.08488832 0.655732681 0.49915474 0.185497755 0.168027636 10.32713422 0.082897584 0.047495242 2.24E-08 7.650260875 -0.429155638 (ac)ADLEEQLS(ph)DEEKVR ddPTM_A459_MK2206_30min_R1 2 ADLEEQLSDEEKVR 14 1 C9JUG7;F8W9N7;P47755-2;P47755 C9JUG7 CAPZA2 F-actin-capping protein subunit alpha-2 1 ADLEEQLS(1)DEEKVR;ADLEEQLS(1)DEEKVR 106.32 0.0018491 57624000 3483.8 4228.2 5341.6 4523.9 3830.6 2952.2 3605.18 4167.7 3305.1 2928.73 TRUE FALSE 3187.484516 3952.943411 4979.027075 4872.331562 3678.019091 3119.351013 3364.68502 4131.262238 3648.676972 3291.563183 0.96838017 1.200931956 1.512663375 1.48024853 1.117408017 0.947680734 1.022214927 1.255106467 1.108493676 1 11.68455718 -6.495423144 22.93523632 1.074605427 1.299870372 0.306233614 0.159887885 351.5227673 293646.9185 0.054228572 0.061275804 3.20E-07 6.495423144 0.225264945 (ac)ADLEEQLS(ph)DEEKVR ddPTM_A459_MK2206_30min_R2 1 ADLEEQLSDEEKVR 14 1 C9JUG7;F8W9N7;P47755-2;P47755 C9JUG7 CAPZA2 F-actin-capping protein subunit alpha-2 1 ADLEEQLS(1)DEEKVR 74.133 0.0055666 10572000 11982 13613 11926 11910 15410 9422.9 14474 10241 13107 13903 TRUE FALSE 12899.35113 12936.99822 12323.60689 10936.9149 14804.92597 9781.495062 12573.54641 11579.53386 14247.02317 13449.34625 0.959106182 0.961905358 0.916297838 0.81319305 1.100791496 0.727284054 0.934881605 0.860973734 1.059309717 1 13.71524843 -8.266880444 24.89505117 1.029654869 0.909255111 0.206446647 0.094382724 699.6871505 3201295.108 0.077953336 0.022434935 5.41E-09 8.266880444 -0.120399758 (ac)ADQLTEEQIAEFK ddPTM_A459_MK2206_30min_R1 2 ADQLTEEQIAEFK 13 0 P0DP25;P0DP24;P0DP23;M0QZ52;F8WBR5;G3V479 P0DP25 CALM3;CALM2;CALM1 0 ; 172.27 3.06E-17 14577000 9583.4 9626.6 10886.2 9309.7 9960.1 9029.1 9154 9167.9 7396.1 8328.5 FALSE TRUE 8768.281506 8999.90659 10147.27507 10026.73471 9563.368126 9540.319839 8543.353362 9087.746017 8164.951062 9360.297457 0.936752443 0.961497926 1.084076133 1.071198298 1.021694895 1.019232549 0.912722422 0.970882182 0.87229611 1 13.19233866 -7.250649965 23.82941793 0.936548694 1.019173826 0.342706297 0.051909491 438.9672388 969500.9148 0.02094702 0.0160398 5.62E-08 7.250649965 0.082625132 (ac)ADQLTEEQIAEFK ddPTM_A459_MK2206_30min_R2 2 ADQLTEEQIAEFK 13 0 P0DP25;P0DP24;P0DP23;M0QZ52;F8WBR5;G3V479 P0DP25 CALM3;CALM2;CALM1 0 ; 185.08 9.63E-48 10967100 86808 100346 89413 99480 101844 81861 101172 83223 89924 101147 FALSE TRUE 93454.08722 95362.96356 92393.98479 91352.16578 97845.09283 84976.27772 87887.99487 94100.53185 97745.42697 97846.58167 0.95510835 0.974617221 0.944274018 0.933626543 0.999984784 0.86846445 0.898222435 0.961715067 0.998966191 1 16.57823383 -8.129507969 3.890957522 0.999099302 0.939645755 0.319276738 0.034684897 0.307302796 7.769981008 0.028110137 0.009597335 7.42E-09 8.129507969 -0.059453547 (ac)ADQLTEEQVTEFK ddPTM_A459_MK2206_30min_R1 1 ADQLTEEQVTEFK 13 0 P27482 P27482 CALML3 Calmodulin-like protein 3 0 125.75 0.0012784 3755200 965.1 1049.9 816.79 660.01 810.19 685.64 1022.4 881.71 885.79 626.64 FALSE TRUE 883.0131771 981.5513192 761.3485705 710.8440846 777.9184167 724.4603443 954.1975615 874.0013024 977.8710403 704.2728941 1.253794068 1.393708784 1.081041989 1.009330461 1.104569583 1.028664244 1.354869071 1.24099807 1.388483141 1 9.459990747 -7.269711394 24.99326011 1.266170736 1.145544463 0.09987907 0.143410779 1383.918598 4181386.554 0.061739015 0.042434747 5.37E-08 7.269711394 -0.120626273 (ac)ADVLDLHEAGGEDFAMDEDGDES(ph)IHK ddPTM_A459_MK2206_30min_R1 1 ADVLDLHEAGGEDFAMDEDGDESIHK 26 0 Q9Y5S9;Q9Y5S9-2 Q9Y5S9 RBM8A RNA-binding protein 8A 1 ADVLDLHEAGGEDFAMDEDGDES(1)IHK 60.093 3.39E-10 1891900 712.8 448.52 473.26 355.91 510.5 487.81 561.17 425.54 642.23 528.26 TRUE FALSE 652.1726169 419.3212665 441.1364298 383.3222499 490.165704 515.4293806 523.7353732 421.8195486 708.9921067 593.704837 1.098479541 0.706279013 0.743023136 0.645644479 0.825605037 0.868157624 0.882147728 0.710486967 1.194182804 1 9.213602057 -8.26097745 24.99999922 1.097091416 0.803677584 0.446085556 0.12782103 35.82711163 1939293.191 0.097969963 0.031831988 5.48E-09 8.26097745 -0.293413832 (ac)AEAEEDCHS(ph)DTVR ddPTM_A459_MK2206_30min_R1 1 AEAEEDCHSDTVR 13 0 Q9UK97-2 Q9UK97-2 1 AEAEEDCHS(0.861)DT(0.139)VR 54.199 0.031598 924290 716.95 966.99 996.15 727.22 559.76 477.44 801.22 713.21 700.48 763.81 TRUE FALSE 655.9696376 904.0387752 928.5341134 783.2306104 537.4635739 504.4722402 747.7720757 706.9744802 773.2974027 858.4365493 0.764144581 1.053122419 1.081657246 0.912391965 0.626095865 0.587663981 0.871086018 0.823560554 0.900820688 1 9.745567692 -6.012113787 23.70285795 0.784021787 0.978662059 0.219335754 0.139677898 387.5176689 758254.7408 0.041729196 0.057008554 9.72E-07 6.012113787 0.194640272 (ac)AEAPAS(ph)PAPLSPLEVELDPEFEPQSRPR ddPTM_A459_MK2206_30min_R1 1 AEAPASPAPLSPLEVELDPEFEPQSRPR 28 1 O43524 O43524 FOXO3 Forkhead box protein O3 1 AEAPAS(0.898)PAPLS(0.102)PLEVELDPEFEPQSRPR 111.67 2.28E-12 3127000 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)AEAS(ph)PHPGR ddPTM_A459_MK2206_30min_R2 2 AEASPHPGR 9 0 U3KQF4;K7EIY6;Q9BV68 U3KQF4 RNF126 E3 ubiquitin-protein ligase RNF126 1 AEAS(1)PHPGR;AEAS(1)PHPGR 83.862 0.004379 6146600 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)AENHCELLS(ph)PAR ddPTM_A459_MK2206_30min_R2 1 AENHCELLSPAR 12 0 H3BSS5;Q9NXV2 H3BSS5 KCTD5 BTB/POZ domain-containing protein KCTD5 1 AENHCELLS(1)PAR 56.482 0.003276 10499000 1883.1 4158.1 5340.8 13196 3136.8 3546.5 3501.8 3869.3 10288 0 TRUE FALSE 2027.271584 3951.6148 5518.859606 12117.84459 3013.633471 3681.464543 3042.009454 4375.030795 11182.83164 0 0 (ac)AEPPS(ph)PVHCVAAAAPTATVSEK ddPTM_A459_MK2206_30min_R2 2 AEPPSPVHCVAAAAPTATVSEK 22 0 Q6PCB5 Q6PCB5 RSBN1L Round spermatid basic protein 1-like protein 1 AEPPS(1)PVHCVAAAAPTATVSEK;AEPPS(0.998)PVHCVAAAAPT(0.001)AT(0.001)VSEK 100.41 4.38E-07 15044600 70311 63639 59362 53431 52960 52078 66053 51894 44127 62912 TRUE FALSE 75694.06422 60478.7798 61341.09945 49065.51638 50880.5243 54059.86478 57380.16176 58676.72398 47965.0867 60859.18659 1.243757409 0.993749394 1.00791849 0.806213805 0.836036877 0.888277807 0.942834845 0.964139143 0.788132234 1 15.89318743 -4.432144865 1.201550997 0.892484324 1.686639136 0.681338064 0.070934806 1.786406169 1.263104034 0.021313677 2.166955765 3.70E-05 4.432144865 0.794154811 (ac)AEPPS(ph)PVHCVAAAAPTATVSEKEPFGK ddPTM_A459_MK2206_30min_R1 3 AEPPSPVHCVAAAAPTATVSEKEPFGK 27 1 Q6PCB5 Q6PCB5 RSBN1L Round spermatid basic protein 1-like protein 1 AEPPS(0.986)PVHCVAAAAPT(0.011)AT(0.002)VSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK 121.65 7.07E-13 117023000 7236.7 7673.6 7267.44 6158.1 7938.5 6336.5 6922.4 7368.3 6087.4 5364.07 TRUE FALSE 6621.180664 7174.047245 6774.146421 6632.397929 7622.292735 6695.267154 6460.619327 7303.87973 6720.207014 6028.611488 1.098292812 1.189999929 1.12366611 1.100153483 1.264352953 1.110581959 1.071659592 1.21153598 1.114718875 1 12.55761004 -8.547736165 22.26505117 0.999999998 1.146793668 0.376108814 0.056477849 1643.577186 1472168.541 0.053135376 0.013719495 2.83E-09 8.547736165 0.14679367 (ac)AEPPS(ph)PVHCVAAAAPTATVSEKEPFGK ddPTM_A459_MK2206_30min_R2 4 AEPPSPVHCVAAAAPTATVSEKEPFGK 27 1 Q6PCB5 Q6PCB5 RSBN1L Round spermatid basic protein 1-like protein 1 AEPPS(1)PVHCVAAAAPTATVSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK 93.388 3.13E-12 173458000 490866 598738 546871 599850 608312 519334 669967 497543 556998 602214 TRUE FALSE 528447.0784 569005.5416 565103.4062 550840.3362 584426.6144 539097.6193 581999.5281 562573.5784 605444.6792 582563.8065 0.907105921 0.976726558 0.970028347 0.945545072 1.003197603 0.925388109 0.999031388 0.965685771 1.039276166 1 19.15205655 -7.895099406 1.501483196 1.015557048 0.958987045 0.355536535 0.03019749 0.461909237 1.894298773 0.024150631 0.008566994 1.27E-08 7.895099406 -0.056570002 (ac)AEQLS(ph)PGK ddPTM_A459_MK2206_30min_R1 2 AEQLSPGK 8 0 O15541 O15541 RNF113A RING finger protein 113A 1 AEQLS(1)PGK;AEQLS(1)PGK 73.233 0.022616 15405200 19570.7 22478 21433.4 16558.7 14149 12695.4 16742.1 13684.4 19483 20680.7 TRUE FALSE 17906.1092 21014.67811 19978.56052 17834.05394 13585.41537 13414.20258 15625.26506 13564.75873 21508.32757 23242.78125 0.770394429 0.904137844 0.859559805 0.767294316 0.584500419 0.57713414 0.672263138 0.583611685 0.925376673 1 14.50449509 -5.969267159 4.796226376 0.691456456 0.847879848 0.103834098 0.139981973 0.30728107 17.46264551 0.039106998 0.057580055 1.07E-06 5.969267159 0.156423392 (ac)AESDWDTVTVLR ddPTM_A459_MK2206_30min_R1 1 AESDWDTVTVLR 12 0 O60869-2;O60869-3;O60869 O60869-2 EDF1 Endothelial differentiation-related factor 1 0 92.538 0.0068006 0 209.85 224.88 301.76 207.49 387.62 198.84 369.04 346.32 256.97 177.93 FALSE TRUE 192.0011555 210.2402711 281.277372 223.4709158 372.1802746 210.098149 344.422015 343.2921608 283.6829511 199.9733117 0.960133899 1.051341648 1.406574555 1.1175037 1.861149728 1.050630943 1.722339906 1.716689881 1.418604056 1 7.643663662 -5.158107485 0.948016205 1.481687023 0.818710013 0.244243997 0.281141145 1.58979272 1.682066002 0.096555298 0.957779676 6.95E-06 5.158107485 -0.662977011 (ac)AESSESFTMAS(ph)SPAQR ddPTM_A459_MK2206_30min_R2 2 AESSESFTMASSPAQR 16 0 P49736;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 AESSESFTMAS(0.906)S(0.094)PAQR;AESS(0.001)ESFTMAS(0.625)S(0.374)PAQR 197.73 1.36E-50 108646000 2392.1 3764.7 2495 3351.5 6981.5 1712.6 3887.3 1402.5 1091.7 2637.5 TRUE FALSE 2575.241015 3577.750472 2578.182055 3077.671729 6707.371231 1777.774193 3376.892841 1585.811566 1186.654093 2551.438591 1.009329021 1.402248318 1.01048172 1.20624958 2.62885858 0.696773263 1.323525031 0.621536247 0.465092163 1 11.3170952 (ac)AESSESFTMASS(ph)PAQR ddPTM_A459_MK2206_30min_R1 2 AESSESFTMASSPAQR 16 0 P49736;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 AESSESFTMAS(0.211)S(0.789)PAQR;AESSESFTMAS(0.229)S(0.771)PAQR 173.19 1.58E-21 34451000 2976.8 2672.3 2491.4 2491.3 2530.5 1960.89 2548.3 2586.3 2306.4 2382 TRUE FALSE 2723.607528 2498.332784 2322.290709 2683.180358 2429.704827 2071.913897 2378.307557 2563.688252 2546.158534 2677.100143 1.017372299 0.933223507 0.867465013 1.002271194 0.907588322 0.773939631 0.888389462 0.957636291 0.951088266 1 11.38645539 -8.270553257 1.894867712 0.991119434 0.911334367 0.134778508 0.065426927 0.699629388 4.678466565 0.065095925 0.019121607 5.36E-09 8.270553257 -0.079785067 (ac)AESSESFTMASS(ph)PAQR ddPTM_A459_MK2206_30min_R2 3 AESSESFTMASSPAQR 16 0 P49736;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 AESSESFTMAS(0.24)S(0.76)PAQR;AESSESFTMAS(0.041)S(0.959)PAQR;AESSESFTMAS(0.067)S(0.933)PAQR 176.08 2.48E-19 48165300 8405.5 7825.3 8576.7 10869.6 9971.8 11849.2 9121.4 8798.2 10339.9 5282.1 TRUE FALSE 9049.031543 7436.706981 8862.642897 9981.51891 9580.257028 12300.12961 7923.749223 9948.154949 11239.24581 5109.74551 1.770935857 1.455396745 1.734458767 1.953427796 1.874899055 2.407190258 1.550713085 1.94689832 2.199570564 1 12.31903572 -5.560145565 4.877489748 1.897547521 1.607543611 0.050338967 0.365142819 0.422472418 23.88936493 0.093932181 0.172670723 2.75E-06 5.560145565 -0.29000391 (ac)AESSESFTMASS(ph)PAQRR ddPTM_A459_MK2206_30min_R1 2 AESSESFTMASSPAQRR 17 1 P49736;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 AESSES(0.008)FT(0.071)MAS(0.105)S(0.816)PAQRR;AESSES(0.001)FT(0.01)MAS(0.061)S(0.928)PAQRR 97.823 6.98E-08 31466000 1101.93 1260.27 1786.79 1571.31 1061.8 869.14 1074.88 1293.18 923.47 793.09 TRUE FALSE 1008.205067 1178.226194 1665.507673 1692.332568 1019.506258 918.3499557 1003.176716 1281.873864 1019.468011 891.3439767 1.131106614 1.321853543 1.868535287 1.898630173 1.143785434 1.030298044 1.1254653 1.438136003 1.143742526 1 9.799838476 -6.300203987 24.71782567 1.161908951 1.560769034 0.410316518 0.239245611 535.9920022 341767.9471 0.081318741 0.092208433 5.01E-07 6.300203987 0.398860083 (ac)AESSESFTMASS(ph)PAQRR ddPTM_A459_MK2206_30min_R2 2 AESSESFTMASSPAQRR 17 1 P49736;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 AESSESFT(0.004)MAS(0.034)S(0.961)PAQRR;AESSESFT(0.019)MAS(0.201)S(0.781)PAQRR 116.78 9.64E-29 10164000 2537 5073.1 4509.2 2847 3418.4 3096.1 2726.8 1471 5588.3 6274.83 TRUE FALSE 2731.234671 4821.177231 4659.534477 2614.390993 3284.17644 3213.924255 2368.767885 1663.264751 6074.360233 6070.082811 0.44995015 0.7942523 0.767622885 0.430701042 0.541043103 0.52946959 0.390236502 0.274010224 1.000704673 1 12.56750048 -8.283912205 24.06047222 1.000352757 0.532839437 0.615308963 0.15105295 414.4200916 443691.1353 0.157597494 0.040838162 5.20E-09 8.283912205 -0.46751332 (ac)AFS(ph)QVQCLDDNHVNWR ddPTM_A459_MK2206_30min_R1 2 AFSQVQCLDDNHVNWR 16 0 A6ND36 A6ND36 FAM83G Protein FAM83G 1 AFS(1)QVQCLDDNHVNWR;AFS(1)QVQCLDDNHVNWR 169.65 2.23E-31 34366000 0 60.677 150.02 118.6 113.36 0 54.38 0 56.625 0 TRUE FALSE 0 56.72691627 139.8370604 127.7345925 108.8446312 0 50.75240942 0 62.51137138 0 0 (ac)AFS(ph)QVQCLDDNHVNWR ddPTM_A459_MK2206_30min_R2 2 AFSQVQCLDDNHVNWR 16 0 A6ND36 A6ND36 FAM83G Protein FAM83G 1 AFS(1)QVQCLDDNHVNWR;AFS(1)QVQCLDDNHVNWR 139.86 1.95E-05 18663300 0 0 2672 0 0 1111.4 1385.7 0 0 0 TRUE FALSE 0 0 2761.083146 0 0 1153.695106 1203.755925 0 0 0 0 (ac)AGLS(ph)DLELRR ddPTM_A459_MK2206_30min_R1 2 AGLSDLELRR 10 1 Q8NC56;D6RBV0 Q8NC56 LEMD2 LEM domain-containing protein 2 1 AGLS(1)DLELRR;AGLS(1)DLELRR 59.542 0.025499 3667400 1450.08 1166.49 1354.24 1223.17 1432 1335.6 1488.68 1236.04 1320.08 1181.65 TRUE FALSE 1326.743081 1090.551289 1262.317962 1317.378765 1374.960408 1411.220518 1389.372873 1225.233433 1457.30704 1328.041723 0.999022138 0.82117246 0.950510771 0.991970917 1.035329225 1.062632667 1.046181644 0.922586551 1.097335283 1 10.37508476 -5.745598244 2.678620611 1.024954144 0.906499368 0.384123762 0.059107873 0.254067951 3.716149029 0.016578022 0.030166397 1.80E-06 5.745598244 -0.118454775 (ac)AGS(ph)PELVVLDPPWDK ddPTM_A459_MK2206_30min_R1 4 AGSPELVVLDPPWDK 15 0 Q5SY74;Q96IY1-2;Q96IY1 Q5SY74 NSL1 Kinetochore-associated protein NSL1 homolog 1 AGS(1)PELVVLDPPWDK;AGS(1)PELVVLDPPWDK;AGS(1)PELVVLDPPWDK;AGS(1)PELVVLDPPWDK 133.91 2.78E-05 45895000 28366 28834.9 29717.6 21728.6 24243.5 24474.5 30425.4 22586 30486.6 32798.9 TRUE FALSE 25953.32274 26957.74277 27700.45211 23402.14054 23277.83006 25860.22504 28395.77708 22388.53298 33655.79117 36862.27535 0.704061876 0.731309788 0.751458011 0.634853392 0.631481097 0.701536321 0.77032079 0.607356241 0.91301448 1 15.1698575 -8.420975778 4.489564673 0.99717063 0.694572119 0.814048358 0.051322858 0.084106939 2.611355658 0.050443762 0.013188694 3.79E-09 8.420975778 -0.302598511 (ac)AGS(ph)PELVVLDPPWDK ddPTM_A459_MK2206_30min_R2 5 AGSPELVVLDPPWDK 15 0 Q5SY74;Q96IY1-2;Q96IY1 Q5SY74 NSL1 Kinetochore-associated protein NSL1 homolog 1 AGS(1)PELVVLDPPWDK;AGS(1)PELVVLDPPWDK;AGS(1)PELVVLDPPWDK;AGS(1)PELVVLDPPWDK;AGS(1)PELVVLDPPWDK 112.94 2.04E-05 11362300 121470.45 112845.17 124871.69 125795.5 107611.87 97186.98 132866.2 108808.88 89084.4 135128.81 TRUE FALSE 130770.321 107241.443 129034.8498 115517.6053 103386.4873 100885.4986 115420.7083 123030.5742 96832.80008 130719.568 1.000388259 0.820393187 0.987111966 0.883705531 0.790902914 0.771770441 0.882964273 0.941179474 0.740767443 1 16.9961156 -1.522880033 0.82169272 0.858503283 35.00667523 0.140338722 0.086325093 1161.900651 3.67143297 0.029849014 74002.07736 0.029999911 1.522880033 34.14817194 (ac)AGS(ph)QDIFDAIVMADER ddPTM_A459_MK2206_30min_R1 1 AGSQDIFDAIVMADER 16 0 F5H8D9;F5H179;A6YPU5;F5H6T8;F5GZY6;B4DFA5;Q8WV07 F5H8D9 ORAOV1 Oral cancer-overexpressed protein 1 1 AGS(1)QDIFDAIVMADER 85.258 0.0050747 410370 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)AHS(ph)PVQSGLPGMQNLK ddPTM_A459_MK2206_30min_R1 7 AHSPVQSGLPGMQNLK 16 0 B4DR80;Q9Y6E0-2 B4DR80 STK24 1 AHS(1)PVQSGLPGMQNLK;AHS(0.999)PVQS(0.001)GLPGMQNLK;AHS(0.996)PVQS(0.004)GLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK 161.21 1.11E-28 215972400 19112.67 18071.06 19835.43 16032.32 20621.21 17334.96 20503.13 18953.78 16489.79 14996.09 TRUE FALSE 17487.03705 16894.63071 18489.05628 17267.13206 19799.82354 18316.45045 19135.40361 18788.0691 18203.96268 16853.91884 1.037565044 1.002415573 1.097018233 1.024517338 1.174790488 1.086776946 1.135368206 1.114759675 1.080102666 1 14.04079646 -5.592338334 1.428541925 1.102426689 1.020706159 0.198600502 0.049581261 0.600524067 2.345450202 0.015040808 0.045179543 2.56E-06 5.592338334 -0.08172053 (ac)AHS(ph)PVQSGLPGMQNLK ddPTM_A459_MK2206_30min_R2 12 AHSPVQSGLPGMQNLK 16 0 B4DR80;Q9Y6E0-2 B4DR80 STK24 1 AHS(1)PVQSGLPGMQNLK;AHS(0.997)PVQS(0.003)GLPGMQNLK;AHS(0.999)PVQS(0.001)GLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(0.997)PVQS(0.003)GLPGMQNLK;AHS(0.999)PVQS(0.001)GLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(0.626)PVQS(0.374)GLPGMQNLK;AHS(1)PVQSGLPGMQNLK 172.27 2.23E-21 263989900 348503 443953 386715 468642 472504 437830 484578 353081 396673.4 417286 TRUE FALSE 375184.6576 421906.9396 399607.8851 430352.4495 453951.1188 454491.9275 420952.3265 399229.899 431175.3353 403669.992 0.929434105 1.045177863 0.98993706 1.06609968 1.124559982 1.125899711 1.042813028 0.989000686 1.068138192 1 18.62281682 -3.662340675 1.015549218 1.059094786 4.47E-15 0.372837661 0.046806689 17.49084473 2.498176775 0.016019168 33.95981917 0.0002176 3.662340675 -1.059094786 (ac)AKS(ph)PENSTLEEILGQYQR ddPTM_A459_MK2206_30min_R1 2 AKSPENSTLEEILGQYQR 18 1 Q86SQ7-2;Q86SQ7-3;Q86SQ7-4;Q86SQ7 Q86SQ7-2 SDCCAG8 Serologically defined colon cancer antigen 8 1 AKS(0.995)PENS(0.004)T(0.001)LEEILGQYQR;AKS(0.998)PENS(0.002)T(0.001)LEEILGQYQR 77.74 1.64E-05 3937300 1036.12 1580.3 1401.53 1413.61 1672.7 1118.02 1431.46 1477.77 1370.08 1205.21 TRUE FALSE 947.9925531 1477.422183 1306.398048 1522.486487 1606.072817 1181.321326 1335.969915 1464.850013 1512.504719 1354.520514 0.699873161 1.090734447 0.964472694 1.124004009 1.185713174 0.872132474 0.986304675 1.081452808 1.116634782 1 10.40356653 -4.756946819 25 1.046200855 0.699872645 0.586420363 0.087410118 100.8825284 561316.8904 0.022412698 0.173631449 1.75E-05 4.756946819 -0.34632821 (ac)ALVT(ph)VSRSPPGSGASTPVGPWDQAVQR ddPTM_A459_MK2206_30min_R1 1 ALVTVSRSPPGSGASTPVGPWDQAVQR 27 1 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-2 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 ALVT(0.301)VS(0.301)RS(0.301)PPGS(0.077)GAS(0.01)T(0.011)PVGPWDQAVQR 45.07 1.62E-08 7537500 552.76 496.6 440.47 387.77 557.61 449.93 465.81 414.3 478.63 466.47 TRUE FALSE 505.7448593 464.2712497 410.5721236 417.6361126 535.3992129 475.4046478 434.7366648 410.6778188 528.3853013 524.2598253 0.964683607 0.885574723 0.783146264 0.796620478 1.021247838 0.906811136 0.829238946 0.783347873 1.007869144 1 9.034138184 -8.288455265 23.92615754 1.003934725 0.871155067 0.336166218 0.074534352 615.1845392 544818.7254 0.075826325 0.019606154 5.15E-09 8.288455265 -0.132779658 (ac)AMS(ph)SGGSGGGVPEQEDSVLFR ddPTM_A459_MK2206_30min_R1 1 AMSSGGSGGGVPEQEDSVLFR 21 0 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 AMS(0.491)S(0.491)GGS(0.017)GGGVPEQEDSVLFR 79.614 0.00025341 1441300 465.12 203.87 160.8 163.85 681.28 563.14 634.2 505.07 329.88 279.73 TRUE FALSE 425.5591016 190.5980259 149.885344 176.4697554 654.143175 595.0245001 591.8936752 500.6542262 364.1722065 314.3850643 1.353623788 0.606256618 0.476757203 0.561317236 2.080706908 1.892661477 1.882702909 1.592487313 1.158363574 1 8.29638887 -6.251452643 24.99213292 1.659430916 0.719776981 0.538577139 0.383527892 508.8051971 1273301.172 0.115767801 0.147656371 5.60E-07 6.251452643 -0.939653936 (ac)AMVS(ph)EFLK ddPTM_A459_MK2206_30min_R1 1 AMVSEFLK 8 0 P04083;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 AMVS(1)EFLK 54.608 0.022819 15168000 509.35 467.26 319 283.47 447.19 314.91 454.97 351.94 337.89 156.12 TRUE FALSE 466.0271078 436.8412891 297.3471688 305.3029085 429.3774754 332.7399321 424.6197814 348.8630257 373.0148747 175.4613242 2.656010433 2.489672815 1.694659322 1.740001165 2.447134588 1.896371941 2.420019245 1.988261671 2.125909378 1 7.455009252 -11.36992219 0.4392171 6.97E-14 2.178820362 0.553556013 0.314325598 37.95993121 2.875156744 39.74042148 0.183572433 4.27E-12 11.36992219 2.178820362 (ac)ANDSGGPGGPS(ph)PSER ddPTM_A459_MK2206_30min_R1 1 ANDSGGPGGPSPSER 15 0 Q9GZT9;Q9GZT9-2;Q9GZT9-3 Q9GZT9 EGLN1 Egl nine homolog 1 1 ANDS(0.006)GGPGGPS(0.809)PS(0.185)ER 72.433 0.00082358 993740 192.64 153.73 128.9 297.03 291.88 40.941 260.47 254.03 0 116.63 TRUE FALSE 176.2549564 143.7221491 120.1506271 319.9073021 280.2538015 43.25904404 243.0945216 251.8090425 0 131.0790049 1.344646738 1.09645438 0.91662755 2.440568589 2.138052556 0.330022677 1.854564899 1.921047865 0 1 7.034292816 -8.258795819 24.99954169 0.499999997 1.496741548 0.288229048 0.631766654 293.3045126 2773784.057 0.484374473 0.164031646 5.51E-09 8.258795819 0.996741551 (ac)ANDSGGPGGPS(ph)PSERDR ddPTM_A459_MK2206_30min_R1 2 ANDSGGPGGPSPSERDR 17 1 Q9GZT9;Q9GZT9-2;Q9GZT9-3 Q9GZT9 EGLN1 Egl nine homolog 1 1 ANDSGGPGGPS(0.908)PS(0.092)ERDR;ANDSGGPGGPS(0.924)PS(0.076)ERDR 106.6 3.81E-05 3153100 134.35 150.85 0 0 81.083 0 122.66 66.081 0 0 TRUE FALSE 122.922827 141.0296376 0 0 77.85329241 0 114.4775752 65.50326078 0 0 0 (ac)AQY(ph)GHPSPLGMAAR ddPTM_A459_MK2206_30min_R1 1 AQYGHPSPLGMAAR 14 0 Q8TF42 Q8TF42 UBASH3B Ubiquitin-associated and SH3 domain-containing protein B 1 AQY(0.759)GHPS(0.241)PLGMAAR 60.167 0.02136 5095800 562.69 453.43 469.44 192.77 498.26 447.51 510.82 573.95 300.45 253.79 TRUE FALSE 514.8302607 423.9116246 437.5757207 207.6171788 478.4132491 472.8476295 476.7441298 568.9320157 331.6828527 285.2314212 1.804956335 1.486202406 1.534107704 0.727890279 1.67728102 1.657768374 1.671429213 1.994633036 1.16285524 1 8.155989108 (ac)AS(ph)AVSPANLPAVLLQPR ddPTM_A459_MK2206_30min_R1 1 ASAVSPANLPAVLLQPR 17 0 P51610;A6NEM2;P51610-2;P51610-4;P51610-3 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 AS(0.961)AVS(0.039)PANLPAVLLQPR 121.61 2.72E-16 14723000 0 0 115.71 0 0 134.56 61.591 0 0 0 TRUE FALSE 0 0 107.8559276 0 0 142.1786709 57.48237677 0 0 0 0 (ac)AS(ph)AVSPANLPAVLLQPR ddPTM_A459_MK2206_30min_R2 2 ASAVSPANLPAVLLQPR 17 0 P51610;A6NEM2;P51610-2;P51610-4;P51610-3 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 AS(0.619)AVS(0.381)PANLPAVLLQPR;AS(0.999)AVS(0.001)PANLPAVLLQPR 143.24 2.53E-10 29999000 0 0 0 0 501.88 664.61 603.37 0 0 0 TRUE FALSE 0 0 0 0 482.1736695 689.9021993 524.1467942 0 0 0 0 (ac)AS(ph)CASIDIEDATQHLR ddPTM_A459_MK2206_30min_R2 1 ASCASIDIEDATQHLR 16 0 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 AS(0.896)CAS(0.104)IDIEDATQHLR 113.22 7.66E-06 3881700 0 730.71 0 484.87 0 749.32 735.51 0 0 0 TRUE FALSE 0 694.424004 0 445.25457 0 777.8358977 638.9366535 0 0 0 0 (ac)AS(ph)EDNRVPSPPPTGDDGGGGGR ddPTM_A459_MK2206_30min_R1 1 ASEDNRVPSPPPTGDDGGGGGR 22 1 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 AS(0.788)EDNRVPS(0.203)PPPT(0.009)GDDGGGGGR 85.909 1.11E-15 17230000 0 167.65 0 107 136.2 177.93 122.27 0 67.28 0 TRUE FALSE 0 156.7359545 0 115.2411585 130.7748656 188.0042428 114.1135914 0 74.27399676 0 0 (ac)AS(ph)ESDTEEFYDAPEDVHLGGGYPVGSPGK ddPTM_A459_MK2206_30min_R2 1 ASESDTEEFYDAPEDVHLGGGYPVGSPGK 29 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 AS(0.455)ES(0.455)DT(0.078)EEFY(0.011)DAPEDVHLGGGYPVGSPGK 67.33 0.027281 0 5342.1 5708.8 6179.7 7059.1 5898.4 5199.7 5941.5 3784.3 3976 5719.4 TRUE FALSE 5751.095283 5425.309293 6385.728114 6482.348949 5666.799179 5397.578227 5161.373913 4278.921003 4321.825293 5532.776446 1.039459183 0.980576271 1.154163407 1.171626761 1.024223414 0.975564128 0.932872304 0.773376811 0.781131379 1 12.43378792 -7.131185324 1.608539419 0.83910234 1.080689881 0.588350393 0.08047375 0.26315533 1.347974545 0.043614551 0.02940415 7.39E-08 7.131185324 0.241587541 (ac)AS(ph)GVAVSDGVIK ddPTM_A459_MK2206_30min_R1 17 ASGVAVSDGVIK 12 0 P23528;E9PP50;E9PS23 P23528 CFL1 Cofilin-1 1 AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(0.998)GVAVS(0.002)DGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK 112.11 3.55E-08 5813761465 194215.1 195399.6 164986.2 154282.3 177260.2 152255.9 146021.7 143512.4 137146.7 117045.3 TRUE FALSE 177696.0859 182679.0505 153787.3964 166165.1495 170199.5509 160876.4975 136280.8588 142257.6862 151403.5902 131545.7554 1.350831012 1.388711099 1.169079123 1.263173783 1.29384297 1.222969886 1.035995866 1.081431216 1.150957625 1 17.00520517 -6.085175106 0.2582425 0.982962175 1.506236948 0.72037456 0.066008326 2.73441828 0.277854359 0.113787795 0.45126218 8.22E-07 6.085175106 0.523274773 (ac)AS(ph)GVAVSDGVIK ddPTM_A459_MK2206_30min_R2 16 ASGVAVSDGVIK 12 0 P23528;E9PP50;E9PS23 P23528 CFL1 Cofilin-1 1 AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(0.989)GVAVS(0.011)DGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(0.999)GVAVS(0.001)DGVIK 118.71 7.77E-06 2905043400 3920775 5267727 4090686 4514216 4766054 4177207 4425523 3151306 3235140 3431065 TRUE FALSE 4220952.549 5006139.337 4227067.43 4145390.113 4578914.772 4336173.539 3844446.514 3563192.514 3516526.629 3319109.63 1.271712302 1.50827779 1.273554628 1.248946427 1.379561172 1.30642673 1.158276448 1.073538663 1.059478903 1 21.66236485 -7.465724282 1.621685675 1.034296771 1.341295476 0.775515765 0.070467741 0.185681784 0.947238975 0.045768765 0.023282168 3.42E-08 7.465724282 0.306998705 (ac)AS(ph)GVQVADEVCR ddPTM_A459_MK2206_30min_R1 4 ASGVQVADEVCR 12 0 P60981;F6RFD5 P60981 DSTN Destrin 1 AS(1)GVQVADEVCR;AS(1)GVQVADEVCR;AS(1)GVQVADEVCR;AS(1)GVQVADEVCR 102.06 0.0016634 296253900 1613.84 1126.57 1385.52 1078.48 1142.23 806.73 1320.29 1217.63 897.51 899.39 TRUE FALSE 1476.574433 1053.230088 1291.474763 1161.544716 1096.73256 852.4063554 1232.215863 1206.984389 990.8093763 1010.813223 1.460778707 1.041963109 1.277659149 1.149119036 1.085000211 0.843287697 1.219034174 1.194072616 0.980210145 1 9.981300727 -2.860908796 1.648086061 1.093237704 199.9776606 0.430916412 0.125029363 786.7664771 5.073402247 0.034889813 589004.3838 0.001377499 2.860908796 198.8844229 (ac)AS(ph)GVQVADEVCR ddPTM_A459_MK2206_30min_R2 4 ASGVQVADEVCR 12 0 P60981;F6RFD5 P60981 DSTN Destrin 1 AS(1)GVQVADEVCR;AS(1)GVQVADEVCR;AS(1)GVQVADEVCR;AS(1)GVQVADEVCR 107.79 0.00049589 472427100 11931.6 4717.9 21179.5 16652.7 20663.2 4800 6216.1 2447.8 1933.1 14324.7 TRUE FALSE 12845.09247 4483.615946 21885.61396 15292.12114 19851.85894 4982.667364 5399.918603 2767.735865 2101.237544 13857.28621 0.926955846 0.323556566 1.579357864 1.103543717 1.432593557 0.359570214 0.389680816 0.19973145 0.15163413 1 13.75835713 -6.781793627 24.77699298 0.368203545 1.061360001 0.421273992 0.380173903 210.4833264 256217.0709 0.135867907 0.119968918 1.65E-07 6.781793627 0.693156456 (ac)AS(ph)GVTVNDEVIK ddPTM_A459_MK2206_30min_R1 2 ASGVTVNDEVIK 12 0 Q9Y281;G3V2U0;F8WDN3 Q9Y281 CFL2 Cofilin-2 1 AS(1)GVTVNDEVIK;AS(1)GVTVNDEVIK 161.79 2.26E-06 238740000 17784.4 18855.3 16469.4 14049.7 16182.8 15043.7 14500 12848.4 12465.1 10600.9 TRUE FALSE 16271.74339 17627.81654 15351.50301 15131.81033 15538.20481 15895.46129 13532.73146 12736.06779 13760.89175 11914.21952 1.365741445 1.479561167 1.288502615 1.270063079 1.304173117 1.334158839 1.13584708 1.068980454 1.154997331 1 13.54039683 -7.197199928 0.394397157 0.991099669 1.437492467 0.799229542 0.062467612 0.573463167 0.208986465 0.073267129 0.091311649 6.35E-08 7.197199928 0.446392798 (ac)AS(ph)GVTVNDEVIK ddPTM_A459_MK2206_30min_R2 2 ASGVTVNDEVIK 12 0 Q9Y281;G3V2U0;F8WDN3 Q9Y281 CFL2 Cofilin-2 1 AS(0.999)GVT(0.001)VNDEVIK;AS(0.98)GVT(0.02)VNDEVIK 101.65 0.00038075 100371000 98731 148303 114785 130198 131093 112042 126284 101218 103833 90333 TRUE FALSE 106289.9213 140938.4887 118611.8746 119560.4069 125945.6301 116305.8368 109702.7591 114447.5401 112864.2067 87385.44161 1.21633443 1.612837174 1.357341365 1.368195946 1.441265591 1.330952098 1.255389423 1.30968658 1.291567618 1 16.41510533 -9.82126425 0.273394354 0.853387562 1.437137585 0.572570938 0.097521841 5.580059162 0.542711696 0.900155688 0.138919939 1.51E-10 9.82126425 0.583750023 (ac)AS(ph)HLRPPSPLLVR ddPTM_A459_MK2206_30min_R2 1 ASHLRPPSPLLVR 13 1 Q8TDB6;Q8TDB6-2 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 AS(0.969)HLRPPS(0.031)PLLVR 64.224 0.010164 4776400 2202.9 883.58 2232.8 797.35 1207.5 916.32 849.29 958.44 2425.7 540.46 TRUE FALSE 2371.555718 839.702702 2307.240438 732.2039544 1160.087483 951.1911997 737.7772028 1083.711399 2636.683001 522.8248345 4.536042593 1.606088018 4.413027625 1.400476615 2.218883661 1.819330562 1.411136492 2.072800157 5.043147968 1 9.030183861 -5.771822991 24.99861163 2.142478306 3.32715645 0.190643249 1.285390574 380.6199367 916345.3981 0.352521456 0.529333949 1.69E-06 5.771822991 1.184678143 (ac)AS(ph)PGHSDLGEVAPEIK ddPTM_A459_MK2206_30min_R1 1 ASPGHSDLGEVAPEIK 16 0 F8WDN0;S4R325;Q8TCY9-2 F8WDN0 URGCP;URGCP-MRPS24 Up-regulator of cell proliferation 1 AS(1)PGHSDLGEVAPEIK 114.72 2.32E-39 9755000 6009.3 5599.4 6541.6 5413.3 5773.4 5302.8 6320.6 5916 5926 4755.2 TRUE FALSE 5498.177479 5234.878042 6097.574418 5830.233304 5543.433253 5603.039953 5898.964307 5864.277036 6542.028906 5344.310076 1.028790882 0.979523637 1.140946976 1.090923472 1.037258912 1.048412213 1.103784066 1.097293561 1.224111029 1 12.383788 -7.418956605 2.900509492 1.119094657 1.055713507 0.127080612 0.06416781 0.51920327 8.420749445 0.031139755 0.018917973 3.81E-08 7.418956605 -0.06338115 (ac)AS(ph)PGHSDLGEVAPEIK ddPTM_A459_MK2206_30min_R2 4 ASPGHSDLGEVAPEIK 16 0 F8WDN0;S4R325;Q8TCY9-2 F8WDN0 URGCP;URGCP-MRPS24 Up-regulator of cell proliferation 1 AS(0.999)PGHS(0.001)DLGEVAPEIK;AS(0.996)PGHS(0.004)DLGEVAPEIK;AS(0.997)PGHS(0.003)DLGEVAPEIK;AS(0.997)PGHS(0.003)DLGEVAPEIK 77.74 0.00069991 21953600 125229 161282 142658 157278 175280 145001 169705 131826 149336 154020 TRUE FALSE 134816.6285 153272.9704 147414.1465 144427.8843 168397.6265 150519.1147 147422.5296 149056.1108 162324.9753 148994.34 0.904843959 1.028716731 0.989394272 0.969351482 1.130228346 1.010233776 0.989450536 1.000414585 1.08947075 1 17.184898 -3.956358016 1.564586942 1.024276671 5.61E-15 0.346964839 0.047709074 15.1272133 4.885065433 0.013328452 43.92246872 0.000110571 3.956358016 -1.024276671 (ac)AS(ph)PGIEVELLGK ddPTM_A459_MK2206_30min_R1 2 ASPGIEVELLGK 12 0 Q8TCY9 Q8TCY9 URGCP Up-regulator of cell proliferation 1 AS(1)PGIEVELLGK;AS(1)PGIEVELLGK 103.55 2.26E-06 5213500 5453.8 5321.3 5285.5 5306.8 5638 4920.4 6160.2 6365.3 5449 5456.9 TRUE FALSE 4989.925671 4974.882403 4926.734986 5715.530656 5413.426521 5198.988796 5749.264298 6309.648853 6015.443049 6132.941969 0.813626755 0.811173891 0.803323268 0.931939465 0.882680213 0.847715309 0.937439866 1.028812743 0.980841345 1 12.58236358 -7.033866307 0.553048467 1.020977106 0.807732117 0.757270867 0.039148134 0.459737467 0.298678789 0.038073668 0.036423483 9.25E-08 7.033866307 -0.213244989 (ac)AS(ph)PPESDGFSDVR ddPTM_A459_MK2206_30min_R2 1 ASPPESDGFSDVR 13 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 AS(0.984)PPES(0.013)DGFS(0.002)DVR 44.639 0.040449 3030900 21452 38101 26127 26506 29137 19140 36328 21381 18762 27271 TRUE FALSE 23094.38161 36208.95974 26998.06114 24340.37501 27992.93498 19868.38611 31558.08996 24175.57011 20393.88485 26381.1495 0.875412256 1.37253154 1.023384562 0.9226427 1.061096105 0.753128142 1.196236349 0.91639563 0.77304762 1 14.68721981 -5.51370514 23.92826879 0.951558548 1.142468432 0.154382664 0.164855587 375.0232562 978200.3481 0.041798921 0.077884402 3.06E-06 5.51370514 0.190909884 (ac)AS(ph)PPESDGFSDVRK ddPTM_A459_MK2206_30min_R1 4 ASPPESDGFSDVRK 14 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 AS(1)PPESDGFSDVRK;AS(1)PPESDGFSDVRK;AS(1)PPESDGFSDVRK;AS(0.997)PPES(0.003)DGFSDVRK 145.46 0.00022864 95780000 9958.2 9924.3 10651.8 8978.3 10589.8 9955.1 9572.3 11272.2 9159.8 7622.1 TRUE FALSE 9111.202797 9278.226266 9928.785494 9669.810222 10167.98584 10518.74916 8933.749333 11173.64834 10111.99399 8566.383292 1.063599711 1.083097259 1.159040537 1.128808961 1.186963681 1.227910169 1.042884614 1.304360074 1.18042745 1 13.06447051 -5.160003131 1.451070872 1.167246378 1.048268868 0.1181828 0.082467748 1.163094537 3.578713647 0.023602083 0.163512635 6.92E-06 5.160003131 -0.11897751 (ac)AS(ph)PPESDGFSDVRK ddPTM_A459_MK2206_30min_R2 3 ASPPESDGFSDVRK 14 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 AS(0.994)PPES(0.006)DGFSDVRK;AS(0.998)PPES(0.002)DGFSDVRK;AS(0.999)PPES(0.001)DGFSDVRK 113.44 0.00055744 87192800 43007 71447 56510 60240 61820 59218 65550 54848 62188 59116 TRUE FALSE 46299.64899 67899.04587 58394.0152 55318.1993 59392.63618 61471.58249 56943.20626 62016.82192 67596.99983 57187.04976 0.809617723 1.187315068 1.021105573 0.96732039 1.038567935 1.074921381 0.995736036 1.084455697 1.182033347 1 15.80340086 -7.888652973 5.770692407 1.104178713 1.022284704 0.102607988 0.098080054 0.444066855 20.5419369 0.051895993 0.024430462 1.29E-08 7.888652973 -0.081894009 (ac)AS(ph)PSSFTYYCPPSSSPVWSEPLYSLRPEHAR ddPTM_A459_MK2206_30min_R1 2 ASPSSFTYYCPPSSSPVWSEPLYSLRPEHAR 31 1 P49356 P49356 FNTB Protein farnesyltransferase subunit beta 1 AS(0.178)PS(0.178)S(0.178)FT(0.163)Y(0.15)Y(0.15)CPPS(0.001)S(0.001)SPVWSEPLYSLRPEHAR;AS(0.339)PS(0.339)S(0.309)FT(0.01)Y(0.002)YCPPSSSPVWSEPLYSLRPEHAR 110.31 1.24E-23 170262000 0 60.297 0 0 0 0 0 0 0 0 TRUE FALSE 0 56.37165434 0 0 0 0 0 0 0 0 0 (ac)AS(ph)PSSFTYYCPPSSSPVWSEPLYSLRPEHAR ddPTM_A459_MK2206_30min_R2 4 ASPSSFTYYCPPSSSPVWSEPLYSLRPEHAR 31 1 P49356 P49356 FNTB Protein farnesyltransferase subunit beta 1 AS(0.75)PS(0.123)S(0.123)FT(0.004)Y(0.001)YCPPSSSPVWSEPLYSLRPEHAR;AS(0.341)PS(0.341)S(0.116)FT(0.119)Y(0.04)Y(0.037)CPPS(0.004)S(0.001)S(0.001)PVWSEPLYSLRPEHAR;AS(0.313)PS(0.313)S(0.313)FT(0.051)Y(0.008)Y(0.002)CPPSSSPVWSEPLYSLRPEHAR;AS(0.258)PS(0.258)S(0.258)FT(0.074)Y(0.068)Y(0.068)CPPS(0.007)S(0.007)S(0.003)PVWSEPLYSLRPEHAR 88.571 2.70E-16 49205000 1378.19 970.23 1045.7 2664.44 1822 0 974.08 957.3 2217.5 963.91 TRUE FALSE 1483.705286 922.049789 1080.563116 2446.746729 1750.459125 0 846.1821259 1082.422397 2410.374142 932.4576956 1.591177051 0.9888382 1.158833394 2.623976123 1.877253127 0 0.907475084 1.160827351 2.584968898 1 9.864894463 (ac)AS(ph)PTDGTDLEASLLSFEK ddPTM_A459_MK2206_30min_R1 6 ASPTDGTDLEASLLSFEK 18 0 G3V5T8 G3V5T8 LIN52 1 AS(0.989)PT(0.011)DGTDLEASLLSFEK;AS(0.477)PT(0.477)DGT(0.046)DLEASLLSFEK;AS(0.999)PT(0.001)DGTDLEASLLSFEK;AS(0.994)PT(0.006)DGTDLEASLLSFEK;AS(0.985)PT(0.015)DGTDLEASLLSFEK;AS(0.494)PT(0.494)DGT(0.012)DLEASLLSFEK 194.24 3.79E-163 25156540 16149.5 15736.97 15672.91 14077.03 15922.69 13839.51 14596.98 13862.2 13349.25 11024.04 TRUE FALSE 14775.90022 14712.49039 14609.07654 15161.24529 15288.45554 14623.0911 13623.2421 13741.00425 14736.95231 12389.7813 1.192587654 1.187469741 1.179123035 1.2236895 1.233956853 1.180254174 1.099554687 1.109059467 1.189444103 1 13.5968631 -7.162530055 4.154944465 1.108594612 1.202561819 0.535397225 0.045638673 0.199620406 6.043633813 0.017648805 0.013380816 6.88E-08 7.162530055 0.093967207 (ac)ASAVS(ph)PANLPAVLLQPR ddPTM_A459_MK2206_30min_R1 1 ASAVSPANLPAVLLQPR 17 0 P51610;A6NEM2;P51610-2;P51610-4;P51610-3 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 AS(0.001)AVS(0.999)PANLPAVLLQPR 162.94 1.10E-63 13294000 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)ASAVS(ph)PANLPAVLLQPR ddPTM_A459_MK2206_30min_R2 2 ASAVSPANLPAVLLQPR 17 0 P51610;A6NEM2;P51610-2;P51610-4;P51610-3 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 AS(0.307)AVS(0.693)PANLPAVLLQPR;AS(0.336)AVS(0.664)PANLPAVLLQPR 135.8 7.11E-13 23540000 715.4 703.6 0 0 843.05 753.65 899.5 610.93 611.3 802.43 TRUE FALSE 770.171574 668.6602471 0 0 809.947621 782.3306789 781.3945695 690.7806486 664.469769 776.2467748 0.992173622 0.861401643 0 0 1.043415119 1.00783759 1.006631647 0.889898253 0.856003259 1 9.600371559 -6.295442786 24.94498556 0.965786326 0.458723241 0.404766747 0.299335629 686.5194034 503630.5403 0.103144585 0.116960842 5.06E-07 6.295442786 -0.507063085 (ac)ASCAS(ph)IDIEDATQHLR ddPTM_A459_MK2206_30min_R1 1 ASCASIDIEDATQHLR 16 0 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 AS(0.377)CAS(0.623)IDIEDATQHLR 128.85 1.57E-05 6071000 0 0 138.59 0 0 63.432 62.544 0 0 0 TRUE FALSE 0 0 129.1828969 0 0 67.02346502 58.37180388 0 0 0 0 (ac)ASCAS(ph)IDIEDATQHLR ddPTM_A459_MK2206_30min_R2 1 ASCASIDIEDATQHLR 16 0 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 AS(0.032)CAS(0.968)IDIEDATQHLR 124.09 7.86E-07 3529700 596.63 0 0 805.98 382.16 737.51 0 530.76 524.44 0 TRUE FALSE 642.3084515 0 0 740.1288558 367.1544782 765.5764598 0 600.1321544 570.0548432 0 0 (ac)ASEDNRVPS(ph)PPPTGDDGGGGGR ddPTM_A459_MK2206_30min_R1 1 ASEDNRVPSPPPTGDDGGGGGR 22 1 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 AS(0.311)EDNRVPS(0.688)PPPT(0.001)GDDGGGGGR 106.55 6.53E-10 13596000 125.82 0 0 0 113.42 131.35 139.05 301.72 251.25 149.61 TRUE FALSE 115.1183483 0 0 0 108.9022412 138.7869235 129.7742282 299.0820939 277.3683366 168.1448163 0.684638104 0 0 0 0.647669334 0.825401143 0.771800351 1.778717301 1.649580063 1 7.393560493 -7.092252941 1.131382389 1.49513817 0.164888389 0.712385462 0.323400291 0.254740667 0.657328965 0.205655489 0.135713298 8.09E-08 7.092252941 -1.330249782 (ac)ASEDNRVPS(ph)PPPTGDDGGGGGR ddPTM_A459_MK2206_30min_R2 2 ASEDNRVPSPPPTGDDGGGGGR 22 1 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 AS(0.096)EDNRVPS(0.902)PPPT(0.002)GDDGGGGGR;AS(0.035)EDNRVPS(0.744)PPPT(0.221)GDDGGGGGR 90.853 0.00011358 65243000 0 906.22 0 1645.1 0 4348.8 1152.8 1885.6 1753 796.71 TRUE FALSE 0 861.2184326 0 1510.690068 0 4514.296631 1001.435975 2132.054394 1905.472771 770.7134179 0 1.117430179 0 1.960119069 0 5.857296015 1.299362321 2.766338751 2.47234929 1 9.590050698 (ac)ASEDNRVPS(ph)PPPTGDDGGGGGREETPTEGGALSLKPGLPIR ddPTM_A459_MK2206_30min_R1 1 ASEDNRVPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIR 41 3 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 AS(0.388)EDNRVPS(0.415)PPPT(0.094)GDDGGGGGREET(0.094)PT(0.008)EGGALSLKPGLPIR 46.32 8.80E-08 88311000 1935.5 2046.8 2170.6 1992.9 2056 1699.8 1948.2 2054.3 1395 1334.1 TRUE FALSE 1770.875561 1913.552948 2023.26572 2146.393503 1974.105166 1796.041207 1818.239133 2036.339472 1540.015242 1499.37838 1.18107316 1.276230852 1.349403024 1.431522244 1.316615734 1.197857213 1.212661965 1.358122472 1.027102473 1 10.55014879 -8.272378793 23.44142198 1.013551018 1.291825032 0.687252528 0.074708527 211.4882839 453174.5836 0.075162983 0.020281468 5.34E-09 8.272378793 0.278274015 (ac)ASES(ph)DTEEFYDAPEDVHLGGGYPVGS(ph)PGK ddPTM_A459_MK2206_30min_R1 1 ASESDTEEFYDAPEDVHLGGGYPVGSPGK 29 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4 Q5JSH3-2 WDR44 WD repeat-containing protein 44 2 AS(0.296)ES(0.354)DT(0.134)EEFY(0.258)DAPEDVHLGGGY(0.003)PVGS(0.955)PGK 60.752 4.22E-06 1626800 390.17 388.99 426.69 417.84 256.26 244.79 425.32 428.37 414.04 387.62 TRUE FALSE 356.9839926 363.6666803 397.7274716 450.0221092 246.0526216 258.6497983 396.9476788 424.6248063 457.0809397 435.641292 0.819444803 0.834784689 0.912970095 1.033010684 0.564805555 0.593721952 0.911180107 0.974712026 1.049213993 1 8.766996895 -7.557101113 4.4821051 1.003297778 0.797419718 0.353519845 0.130483151 0.268197332 12.52408149 0.070584287 0.040497801 2.77E-08 7.557101113 -0.20587806 (ac)ASESDT(ph)EEFYDAPEDVHLGGGYPVGSPGK ddPTM_A459_MK2206_30min_R1 2 ASESDTEEFYDAPEDVHLGGGYPVGSPGK 29 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 AS(0.306)ES(0.306)DT(0.387)EEFY(0.001)DAPEDVHLGGGYPVGSPGK;AS(0.304)ES(0.304)DT(0.378)EEFY(0.013)DAPEDVHLGGGYPVGSPGK 113.3 6.54E-14 14426200 7883.2 7213.5 7708.4 6836.8 8582 6776.4 6269.6 6915.5 5639.3 4723.5 TRUE FALSE 7212.692444 6743.899839 7185.175285 7363.371521 8240.160767 7160.073912 5851.366424 6855.038513 6225.525415 5308.682841 1.358659513 1.270352749 1.353476088 1.387043028 1.552204382 1.348747726 1.102225655 1.291288012 1.172706225 1 12.37413824 -8.192811833 0.703391986 1.014822599 1.375431027 0.595222221 0.095107598 0.513827692 0.561460789 0.100623602 0.04299743 6.41E-09 8.192811833 0.360608428 (ac)ASGEHS(ph)PGSGAAR ddPTM_A459_MK2206_30min_R1 8 ASGEHSPGSGAAR 13 0 A6NKB8;Q9H4A4 A6NKB8 RNPEP Aminopeptidase B 1 ASGEHS(0.957)PGS(0.043)GAAR;AS(0.007)GEHS(0.97)PGS(0.022)GAAR;ASGEHS(0.986)PGS(0.014)GAAR;AS(0.021)GEHS(0.864)PGS(0.116)GAAR;AS(0.17)GEHS(0.751)PGS(0.079)GAAR;AS(0.003)GEHS(0.966)PGS(0.03)GAAR;AS(0.01)GEHS(0.981)PGS(0.009)GAAR;AS(0.001)GEHS(0.833)PGS(0.166)GAAR 125.84 1.23E-29 51073940 1342.198 1459.58 1195.826 1538 1795.92 1036.067 1406.129 1189.56 1015.19 1288.672 TRUE FALSE 1228.037012 1364.561077 1114.656663 1656.457026 1724.384703 1094.728218 1312.3287 1179.159802 1120.722633 1448.322416 0.847903062 0.942166648 0.769619147 1.143707373 1.190608309 0.755859473 0.906102595 0.814155598 0.773807421 1 10.50016709 (ac)ASGEHS(ph)PGSGAAR ddPTM_A459_MK2206_30min_R2 5 ASGEHSPGSGAAR 13 0 A6NKB8;Q9H4A4 A6NKB8 RNPEP Aminopeptidase B 1 AS(0.003)GEHS(0.872)PGS(0.125)GAAR;ASGEHS(0.978)PGS(0.021)GAAR;AS(0.002)GEHS(0.995)PGS(0.002)GAAR;AS(0.003)GEHS(0.971)PGS(0.026)GAAR;ASGEHS(0.999)PGS(0.001)GAAR 127.78 8.39E-23 351504300 0 0 391.85 882.67 612.06 0 550.64 497.54 590.01 0 TRUE FALSE 0 0 404.9140834 810.5530375 588.027449 0 478.3403066 562.5701863 641.3280033 0 0 (ac)ASGVAVSDGVIK ddPTM_A459_MK2206_30min_R2 1 ASGVAVSDGVIK 12 0 P23528;E9PP50;E9PS23 P23528 CFL1 Cofilin-1 0 64.374 0.012971 0 15722 19866 15537 19418 20838 24952 16004 13929 15357 15118 FALSE TRUE 16925.68841 18879.48333 16054.99583 17831.48728 20019.79542 25901.56584 13902.65558 15749.56813 16692.7241 14624.7009 1.157335697 1.290931244 1.097799944 1.21927193 1.368902896 1.771083458 0.95062837 1.076915571 1.141406188 1 13.8361195 (ac)ASHLRPPS(ph)PLLVR ddPTM_A459_MK2206_30min_R1 1 ASHLRPPSPLLVR 13 1 Q8TDB6;Q8TDB6-2 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 AS(0.464)HLRPPS(0.536)PLLVR 43.05 0.010656 54432000 504.81 461.52 473.7 422.71 461.92 568.46 428.65 347.18 341.3 225.47 TRUE FALSE 461.8732586 431.4749641 441.5465638 455.2671974 443.5207483 600.6457139 400.0555406 344.1446419 376.7793564 253.4029258 1.822683212 1.702722898 1.742468294 1.796613816 1.750258987 2.37031878 1.578732918 1.358092614 1.486878477 1 7.985289372 -8.093796796 1.220031155 1.09897591 1.839843315 0.597099517 0.213350684 0.328152609 0.902611404 0.204157211 0.068563478 8.06E-09 8.093796796 0.740867405 (ac)ASLEVS(ph)RSPR ddPTM_A459_MK2206_30min_R2 1 ASLEVSRSPR 10 1 Q5QPJ9;Q5QPK2;O60762 Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 1 ASLEVS(0.985)RS(0.015)PR 104.07 0.00060458 135430000 3693.1 3879.1 6719.2 5284.3 4250.8 5969.2 2587.9 0 2411.4 4088.7 TRUE FALSE 3975.846576 3686.469535 6943.214774 4852.555786 4083.892233 6196.362089 2248.105621 0 2621.139213 3955.286054 1.005198239 0.932036137 1.755426707 1.22685331 1.032515014 1.56660277 0.568380034 0 0.662692705 1 11.94956632 -7.359789928 6.236705867 0.461479482 1.248650645 0.503969843 0.333532234 0.181923976 9.670006675 0.139555126 0.093312376 4.37E-08 7.359789928 0.787171163 (ac)ASLEVSRS(ph)PR ddPTM_A459_MK2206_30min_R1 2 ASLEVSRSPR 10 1 Q5QPJ9;Q5QPK2;O60762 Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 1 ASLEVS(0.027)RS(0.973)PR;ASLEVS(0.381)RS(0.619)PR 103.46 0.00052045 249500000 428.31 340.85 352.63 284.58 352.5 185.233 341.05 412.2 111.7 298.87 TRUE FALSE 391.8799854 318.660603 328.6944581 306.4984009 338.4591786 195.7207324 318.2991768 408.5961789 123.3116147 335.896272 1.166669648 0.948687525 0.978559411 0.912479317 1.007630054 0.582682062 0.94761152 1.216435587 0.367112186 1 8.391871973 -1.522878746 0.525806795 0.854458059 11.90081077 0.14605479 0.223854986 252.6390712 2.492766143 0.112674709 3120.286263 0.03 1.522878746 11.04635271 (ac)ASLEVSRS(ph)PR ddPTM_A459_MK2206_30min_R2 1 ASLEVSRSPR 10 1 Q5QPJ9;Q5QPK2;O60762 Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 1 ASLEVS(0.002)RS(0.998)PR 96.82 0.00055342 135090000 0 0 0 8725.2 0 10377 0 0 0 0 TRUE FALSE 0 0 0 8012.323249 0 10771.90401 0 0 0 0 0 (ac)ASPSKGNDLFS(ph)PDEEGPAVVAGPGPGPGGAEGAAEER ddPTM_A459_MK2206_30min_R1 1 ASPSKGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEER 37 1 D6RIS4;P35548 D6RIS4 MSX2 Homeobox protein MSX-2 1 AS(0.023)PS(0.023)KGNDLFS(0.954)PDEEGPAVVAGPGPGPGGAEGAAEER 100.17 1.81E-14 3533100 73.873 0 62.386 0 0 60.362 0 0 0 0 TRUE FALSE 67.58971343 0 58.15141214 0 0 63.77964428 0 0 0 0 0 (ac)ASPT(ph)DGTDLEASLLSFEK ddPTM_A459_MK2206_30min_R1 1 ASPTDGTDLEASLLSFEK 18 0 G3V5T8 G3V5T8 LIN52 1 AS(0.442)PT(0.557)DGT(0.001)DLEASLLSFEK 107.14 0.00014751 0 268.77 239.67 108.17 179.2 193.71 217.44 266.65 159.94 114.64 205.18 TRUE FALSE 245.9097001 224.0674394 100.8277218 193.002015 185.9941205 229.7512649 248.862265 158.5416614 126.5572382 230.5992474 1.066394201 0.971674634 0.437242198 0.836958564 0.806568636 0.9963227 1.07919808 0.68752029 0.548818956 1 7.849243994 -12.04224419 2.183915374 3.361822814 0.826693546 0.061175469 0.204884056 16532894.36 599744.3564 196740059.8 0.053619212 9.07E-13 12.04224419 -2.535129269 (ac)ASYFDEHDCEPS(ph)DPEQETR ddPTM_A459_MK2206_30min_R2 2 ASYFDEHDCEPSDPEQETR 19 0 C9J1C6;Q9P0P0;F8WBU5;C9J391 C9J1C6 RNF181 E3 ubiquitin-protein ligase RNF181 1 AS(0.022)Y(0.018)FDEHDCEPS(0.825)DPEQET(0.135)R;AS(0.011)Y(0.008)FDEHDCEPS(0.98)DPEQET(0.001)R 124.98 1.02E-38 7554800 0 2515.72 799.75 8023 1802.6 12307.5 956.11 2210.91 8408.3 929.22 TRUE FALSE 0 2390.793003 826.4132658 7367.495236 1731.820867 12775.87054 830.5716085 2499.883528 9139.638735 898.8996275 0 2.659688501 0.919361006 8.196126698 1.926600939 14.21278878 0.923987043 2.781048575 10.16758541 1 9.812016221 (ac)AT(ph)DTSQGELVHPK ddPTM_A459_MK2206_30min_R1 1 ATDTSQGELVHPK 13 0 Q5SSJ5;B0QZK9;B0QZK8;Q5SSJ5-5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 AT(0.333)DT(0.333)S(0.333)QGELVHPK 63.283 0.018084 2383200 1575 2289.7 2270.4 1723.1 1707 1793 1799.5 1891.3 1749.5 1560.6 TRUE FALSE 1441.037979 2140.640114 2116.291574 1855.813461 1639.006575 1894.518111 1679.458638 1874.764563 1931.366786 1753.93891 0.82160101 1.220475868 1.206593663 1.058083295 0.934471871 1.080150568 0.957535424 1.068888177 1.101159667 1 10.77638278 -5.995406604 24.9580878 1.023897561 1.102597036 0.045090497 0.113048421 330.5891931 1796212.794 0.031521452 0.046567093 1.01E-06 5.995406604 0.078699474 (ac)AT(ph)SATSPHAPGFPAEGR ddPTM_A459_MK2206_30min_R1 1 ATSATSPHAPGFPAEGR 17 0 Q9NUP7;Q5VVL2;Q9NUP7-2 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog 1 AT(0.684)S(0.134)AT(0.157)S(0.026)PHAPGFPAEGR 112.02 0.00066105 5629200 287.14 266.82 213.28 246.41 326.81 397.89 259.11 343.62 227.77 150.32 TRUE FALSE 262.7172352 249.4499695 198.8031478 265.3885409 313.7924657 420.418188 241.8252447 340.6157666 251.4475066 168.9427765 1.5550664 1.476535279 1.176748435 1.570878297 1.857389065 2.488524202 1.431403282 2.016160582 1.488359028 1 7.400390856 -6.03696045 5.248131061 1.785249142 1.403519425 0.10021972 0.38257765 0.342802558 24.44634247 0.109539641 0.148341848 9.18E-07 6.03696045 -0.381729717 (ac)AT(ph)SATSPHAPGFPAEGR ddPTM_A459_MK2206_30min_R2 1 ATSATSPHAPGFPAEGR 17 0 Q9NUP7;Q5VVL2;Q9NUP7-2 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog 1 AT(0.814)S(0.146)AT(0.039)S(0.001)PHAPGFPAEGR 118.76 3.36E-06 7533100 19307 30380 29061 49838 42374 50180 30877 39532 38091 31041 TRUE FALSE 20785.15876 28871.37338 30029.87924 45766.07598 40710.18385 52089.63506 26822.81281 44698.96813 41404.08633 30028.13471 0.692189474 0.961477416 1.000058096 1.524106523 1.355734688 1.734694331 0.893256044 1.488569589 1.378843099 1 14.87402724 -5.590074481 4.149427186 1.357499416 0.85422583 0.438265249 0.239274278 0.187345107 6.378814159 0.064077167 0.118504319 2.57E-06 5.590074481 -0.503273586 (ac)AT(ph)TGTPTADRGDAAATDDPAAR ddPTM_A459_MK2206_30min_R2 1 ATTGTPTADRGDAAATDDPAAR 22 1 Q86TI2-4;Q86TI2 Q86TI2-4 DPP9 Dipeptidyl peptidase 9 1 AT(0.27)T(0.27)GT(0.27)PT(0.188)ADRGDAAAT(0.002)DDPAAR 60.401 4.96E-07 6024500 979.59 2810.1 2153 2500.2 2420.2 1085.6 1135.1 448.65 2544.5 2751.9 TRUE FALSE 1054.588164 2670.55452 2224.779945 2295.925662 2325.170787 1126.913269 986.0600065 507.2900954 2765.816011 2662.105728 0.396148114 1.003173725 0.835721858 0.862447212 0.873432923 0.423316496 0.370406027 0.19055971 1.038957988 1 11.37835216 -4.532584242 19.70199352 0.698508365 0.201527398 0.1005944 0.285888049 64306624.57 3312890286 0.075365113 582272546.9 2.93E-05 4.532584242 -0.496980968 (ac)ATAAET(ph)SASEPEAESK ddPTM_A459_MK2206_30min_R2 1 ATAAETSASEPEAESK 16 0 A0A494C0L2;F8W667;A0A499FI31;Q15020-3;Q15020-2;Q15020-4;Q15020 A0A494C0L2 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 1 AT(0.001)AAET(0.634)S(0.327)AS(0.038)EPEAESK 82.529 0.00068157 8414400 31601 43666 34275 34624 36756 33678 42473 32132 30589 37033 TRUE FALSE 34020.39686 41497.60994 35417.71139 31795.10844 35312.77476 34959.63989 36896.24408 36331.76273 33249.57593 35824.61624 0.94963744 1.158354626 0.988641753 0.887521257 0.985712576 0.975855251 1.02991317 1.014156369 0.928120924 1 15.12866363 -5.494252012 24.67384605 0.974832263 1.058871595 0.209562847 0.060800715 803.8392967 692840.6518 0.015398182 0.031945469 3.20E-06 5.494252012 0.084039332 (ac)ATDELATKLS(ph)R ddPTM_A459_MK2206_30min_R2 1 ATDELATKLSR 11 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 ATDELAT(0.001)KLS(0.999)R 71.888 0.0060015 18571000 28988 21794 22690 27983 28393 22200 27827 17267 18343 24727 TRUE FALSE 31207.34357 20711.74165 23446.47328 25696.69939 27278.14816 23044.83656 24173.28147 19523.85619 19938.44098 23920.16002 1.304646104 0.865869695 0.980197175 1.074269544 1.140383181 0.963406455 1.01058193 0.816209263 0.833541288 1 14.54593942 -7.641775427 4.811835067 0.869549409 1.043145092 0.287346725 0.119189793 0.265613917 9.978961401 0.057529375 0.03200975 2.28E-08 7.641775427 0.173595684 (ac)ATEPPS(ph)PLRVEAPGPPEMR ddPTM_A459_MK2206_30min_R1 1 ATEPPSPLRVEAPGPPEMR 19 1 Q8NFU5 Q8NFU5 IPMK Inositol polyphosphate multikinase 1 AT(0.013)EPPS(0.987)PLRVEAPGPPEMR 60.364 0.0028736 0 358.59 142.05 146.02 128.06 139.19 132.36 263.3 195.71 58.679 252.74 TRUE FALSE 328.0900375 132.8025192 136.1085692 137.9232034 133.6457676 139.8541088 245.7357374 193.9989281 64.77889203 284.0513393 1.155037812 0.467529988 0.479168905 0.485557307 0.470498636 0.492355041 0.865110293 0.682971355 0.228053465 1 8.150007895 -10.49187169 20.10655018 0.999998236 0.585942351 0.200456345 0.24431302 0 0 0.232170689 0.056309663 3.22E-11 10.49187169 -0.414055885 (ac)ATFVELS(ph)TK ddPTM_A459_MK2206_30min_R1 2 ATFVELSTK 9 0 O60218;C9JRZ8 O60218 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 1 ATFVELS(0.706)T(0.294)K;ATFVELS(0.912)T(0.088)K 110.84 0.0012256 8188400 11384.2 14071.6 11501.1 9093.4 9681.7 8780.9 8878.1 7938.6 10488.3 9322.1 TRUE FALSE 10415.91401 13155.53628 10720.43738 9793.775244 9296.057388 9278.06697 8285.858148 7869.193657 11578.59632 10476.99213 0.994170262 1.255659652 1.023236178 0.934788833 0.887283037 0.885565901 0.790862306 0.751092829 1.105145082 1 13.35493697 -5.671353062 2.671416072 0.887268452 1.12786896 0.372429046 0.111720218 0.244050079 3.511178486 0.031377054 0.060799585 2.13E-06 5.671353062 0.240600508 (ac)ATFVELST(ph)K ddPTM_A459_MK2206_30min_R1 1 ATFVELSTK 9 0 O60218;C9JRZ8 O60218 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 1 ATFVELS(0.224)T(0.776)K 141.91 0.030778 3707900 3198.1 3765.2 3732.1 2303.8 2534.7 2502 2974.8 2772.8 3775 3095.8 TRUE FALSE 2926.084801 3520.084796 3478.77545 2481.239075 2433.737532 2643.661078 2776.35652 2748.557702 4167.424759 3479.331076 0.840990621 1.01171309 0.999840307 0.713136813 0.69948432 0.759818776 0.797956981 0.789967279 1.197766084 1 11.76459425 -8.253423377 24.97320665 1.098883048 0.827355822 0.497700404 0.10940781 485.2008718 1511615.72 0.085425467 0.031043122 5.58E-09 8.253423377 -0.271527226 (ac)ATFVELSTK ddPTM_A459_MK2206_30min_R1 3 ATFVELSTK 9 0 O60218;C9JRZ8 O60218 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ;; 104.06 0.00019269 10466200 14762.9 16266.2 16673.1 17674.7 15790.5 14338.7 15745.4 15294.4 9948.3 12832.5 FALSE TRUE 13507.23783 15207.26742 15541.37643 19036.00846 15161.53095 15150.5448 14695.0531 15160.68267 10982.46139 14422.28698 0.936553117 1.054428292 1.077594451 1.31990221 1.051257056 1.050495308 1.01891282 1.051198239 0.761492362 1 13.81601233 -8.120891126 6.650039093 0.882313302 1.076950327 0.338243903 0.106074834 0.271462519 13.47636532 0.074723401 0.027791891 7.57E-09 8.120891126 0.194637025 (ac)ATSAT(ph)SPHAPGFPAEGR ddPTM_A459_MK2206_30min_R1 1 ATSATSPHAPGFPAEGR 17 0 Q9NUP7;Q5VVL2;Q9NUP7-2 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog 1 AT(0.058)S(0.012)AT(0.796)S(0.135)PHAPGFPAEGR 107.63 0.013724 6617900 216.22 67.513 105.11 283.74 365.38 228.93 324.73 117.54 132.55 168.3 TRUE FALSE 197.8293536 63.11789143 97.97542605 305.593704 350.8261409 241.8918188 303.0678542 116.5123602 146.3290468 189.1502746 1.04588457 0.333691778 0.517976652 1.615613324 1.85474825 1.278834087 1.602259658 0.615977748 0.773612659 1 7.563389061 -5.747360052 24.88451396 1.273956545 0.602634823 0.331145407 0.399519162 263.5634289 465831.1326 0.117842151 0.202825804 1.79E-06 5.747360052 -0.671321722 (ac)ATSAT(ph)SPHAPGFPAEGR ddPTM_A459_MK2206_30min_R2 1 ATSATSPHAPGFPAEGR 17 0 Q9NUP7;Q5VVL2;Q9NUP7-2 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog 1 ATS(0.001)AT(0.967)S(0.032)PHAPGFPAEGR 99.915 3.18E-06 7507300 6540.8 16265 10869 19813 11347 14465 5150 11537 7176.5 9347.5 TRUE FALSE 7041.568677 15457.30375 11231.36704 18194.21452 10901.45977 15015.47571 4473.798814 13044.92551 7800.698998 9042.491841 0.778719937 1.709407542 1.242065487 2.012079728 1.205581377 1.660546227 0.494752873 1.44262508 0.862671389 1 13.14250468 -7.236646358 24.92849213 0.986897603 1.454287955 0.277563873 0.38046599 984.7791232 990161.2722 0.136937135 0.106024115 5.80E-08 7.236646358 0.467390351 (ac)ATVVVEATEPEPSGSIANPAAS(ph)TSPSLSHR ddPTM_A459_MK2206_30min_R1 1 ATVVVEATEPEPSGSIANPAASTSPSLSHR 30 0 P46821;D6RA32;D6RGJ3;D6RCL2 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ATVVVEATEPEPSGS(0.002)IANPAAS(0.364)T(0.303)S(0.252)PS(0.072)LS(0.007)HR 67.279 1.40E-06 10447000 249.56 270.52 352.71 358.05 360.98 312.45 314.55 485.24 311.05 318.29 TRUE FALSE 228.3336115 252.9090988 328.7690279 385.627073 346.6014022 330.140649 293.5669434 480.9975978 343.3847606 357.7221682 0.638298746 0.706998675 0.919062494 1.0780072 0.968912282 0.922896813 0.820656279 1.344612218 0.959920271 1 8.482695715 -5.298135058 2.527967844 1.014405639 0.647121323 0.524025273 0.12864758 0.236825847 2.899564221 0.036253213 0.112014673 5.03E-06 5.298135058 -0.367284316 (ac)ATVVVEATEPEPSGSIANPAAST(ph)SPSLSHR ddPTM_A459_MK2206_30min_R2 1 ATVVVEATEPEPSGSIANPAASTSPSLSHR 30 0 P46821;D6RA32;D6RGJ3;D6RCL2 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ATVVVEATEPEPSGSIANPAAS(0.032)T(0.682)S(0.248)PS(0.036)LS(0.002)HR 104.72 1.65E-17 18663000 904.06 1992.6 0 0 0 0 0 0 0 0 TRUE FALSE 973.2755287 1893.650382 0 0 0 0 0 0 0 0 0 (ac)ATVVVEATEPEPSGSIANPAASTS(ph)PSLSHR ddPTM_A459_MK2206_30min_R1 6 ATVVVEATEPEPSGSIANPAASTSPSLSHR 30 0 P46821;D6RA32;D6RGJ3;D6RCL2 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ATVVVEATEPEPSGSIANPAAS(0.019)T(0.205)S(0.565)PS(0.205)LS(0.005)HR;ATVVVEATEPEPSGSIANPAAS(0.097)T(0.239)S(0.592)PS(0.068)LS(0.003)HR;ATVVVEATEPEPSGSIANPAAS(0.105)T(0.198)S(0.491)PS(0.198)LS(0.01)HR;ATVVVEATEPEPSGSIANPAAS(0.065)T(0.18)S(0.503)PS(0.244)LS(0.007)HR;ATVVVEATEPEPS(0.001)GSIANPAAS(0.265)T(0.195)S(0.447)PS(0.086)LS(0.006)HR;ATVVVEATEPEPSGSIANPAAS(0.086)T(0.226)S(0.599)PS(0.086)LS(0.003)HR 117.22 2.11E-22 268803500 1661.37 1527.69 1739.86 847.37 1449.54 1324.938 1491.3 1090.23 1420.685 2238.18 TRUE FALSE 1520.061757 1428.237103 1621.763151 912.6345842 1391.801752 1399.954845 1391.818098 1080.698234 1568.37029 2515.462636 0.604287154 0.567783072 0.644717647 0.362809835 0.55329852 0.556539709 0.553305018 0.429622058 0.623491785 1 11.29660804 -8.552760348 20.98379361 1.000000002 0.534645502 0.764636217 0.077328407 506.1258252 355417.453 0.074228013 0.01916559 2.80E-09 8.552760348 -0.4653545 (ac)ATVVVEATEPEPSGSIANPAASTS(ph)PSLSHR ddPTM_A459_MK2206_30min_R2 1 ATVVVEATEPEPSGSIANPAASTSPSLSHR 30 0 P46821;D6RA32;D6RGJ3;D6RCL2 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AT(0.001)VVVEAT(0.003)EPEPS(0.002)GS(0.002)IANPAAS(0.104)T(0.236)S(0.542)PS(0.104)LS(0.007)HR 77.358 1.54E-10 20516000 585.77 1800.8 687.67 0 0 502.27 520.18 644.24 0 0 TRUE FALSE 630.6170016 1711.374891 710.5965746 0 0 521.3842368 451.8797412 728.44438 0 0 0 (ac)AVAVGRPS(ph)NEELR ddPTM_A459_MK2206_30min_R2 2 AVAVGRPSNEELR 13 1 D6RGI3;D6RER5;Q9NVA2 D6RGI3 Sep-11 Septin-11 1 AVAVGRPS(1)NEELR;AVAVGRPS(1)NEELR 94.547 0.0021862 23983000 11878 13368.3 17095.3 24748.4 16478.1 35220.3 17310.3 14703 27549.7 12341 TRUE FALSE 12787.38881 12704.44966 17665.24877 22726.37655 15831.087 36560.6332 15037.43682 16624.73258 29945.92311 11938.31418 1.07112182 1.064174511 1.479710494 1.903650399 1.326073913 3.062461973 1.259594662 1.392552779 2.508387923 1 13.54331151 -5.455423618 2.476759038 1.810487796 1.050636622 0.186713313 0.586597909 0.468790018 5.576886801 0.160971065 0.404004326 3.50E-06 5.455423618 -0.759851174 (ac)CDFTEDQTAEFK ddPTM_A459_MK2206_30min_R1 1 CDFTEDQTAEFK 12 0 P60660-2;F8W1R7;G3V1V0;P60660;G3V1Y7 P60660-2 MYL6 Myosin light polypeptide 6 0 155.06 5.97E-14 0 1041.9 825.02 916.97 852.06 1092.7 755.93 934.9 816.74 634.29 982.21 FALSE TRUE 953.2809338 771.311048 854.7286312 917.6858088 1049.175445 798.7301033 872.5345268 809.5993283 700.2267153 1103.89359 0.863562342 0.698718658 0.774285347 0.831317273 0.950431685 0.723557153 0.79041543 0.733403415 0.634324469 1 10.10838539 -10.22862596 13.81345712 1.000006084 0.779475761 0.381633857 0.084835605 0 0 0.084531667 0.020501941 5.91E-11 10.22862596 -0.220530323 (ac)CDFTEDQTAEFK ddPTM_A459_MK2206_30min_R2 1 CDFTEDQTAEFK 12 0 P60660-2;F8W1R7;G3V1V0;P60660;G3V1Y7 P60660-2 MYL6 Myosin light polypeptide 6 0 134.84 0.0048049 1219600 11501 12431 11338 14488 13923 10273 15040 11485 11783 13925 FALSE TRUE 12381.5254 11813.69462 11716.00326 13304.28406 13376.31306 10663.94621 13065.22993 12986.12893 12807.86404 13470.62839 0.919149801 0.876996549 0.869744374 0.987651331 0.992998446 0.791644302 0.969905008 0.964032899 0.9507993 1 13.71752953 -14.37580786 0.052635731 1.334410504 0.765141231 0.188058748 0.057713545 876.2891417 3.472904551 39.74409446 8.482398591 4.21E-15 14.37580786 -0.569269273 (ac)DDDIAALVVDNGS(ph)GMCK ddPTM_A459_MK2206_30min_R1 2 DDDIAALVVDNGSGMCK 17 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5 P60709 ACTB "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed" 1 DDDIAALVVDNGS(1)GMCK;DDDIAALVVDNGS(1)GMCK 154.47 3.68E-09 5691700 1921.48 1730.8 2000.74 1833.32 1616.58 1880.71 2436.8 1463.79 1607.48 1536.37 TRUE FALSE 1758.048036 1618.124605 1864.935343 1974.522624 1552.188195 1987.194175 2274.245518 1450.992238 1774.583298 1726.707115 1.018150688 0.93711585 1.080053083 1.143519134 0.898929635 1.150857698 1.317099755 0.84032331 1.02772687 1 10.75380768 -5.271093747 24.24584506 1.061652073 0.977633268 0.057529167 0.128043825 1228.818729 3086044.103 0.034338279 0.072968272 5.36E-06 5.271093747 -0.084018804 (ac)DDDIAALVVDNGSGMCK ddPTM_A459_MK2206_30min_R1 11 DDDIAALVVDNGSGMCK 17 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5 P60709 ACTB "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed" 0 ;;;;;;;;;; 262.54 6.84E-280 241595900 22100.63 21859.74 21542.81 19553.47 23385.19 19623.99 21737.79 20556.19 18487.6 17617.84 FALSE TRUE 20220.85536 20436.66695 20080.54408 21059.48165 22453.70836 20735.08336 20287.70169 20376.4694 20409.45218 19800.47103 1.021231027 1.032130343 1.014144767 1.063584882 1.133998698 1.04720152 1.024607024 1.029090135 1.030755892 1 14.27324713 -10.26709761 9.365660073 0.999995314 1.045146772 0.138360464 0.032906169 0 0 0.035141376 0.008523036 5.41E-11 10.26709761 0.045151457 (ac)DDDIAALVVDNGSGMCK ddPTM_A459_MK2206_30min_R2 3 DDDIAALVVDNGSGMCK 17 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5 P60709 ACTB "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed" 0 ;; 228.93 1.85E-117 65222000 150590.1 188725.2 178994.4 188087.8 205139.5 162398 195314.8 158607.7 160722.3 183144.4 FALSE TRUE 162119.3938 179353.381 184961.984 172720.4251 197084.6925 168578.1697 169669.7321 179338.271 174701.6351 177168.4132 0.915058113 1.012332716 1.043989618 0.974894011 1.112414391 0.951513685 0.957674842 1.01224743 0.986076648 1 17.43476189 -4.759180704 24.81632035 1.006442629 0.915057984 0.274160498 0.044221333 75.46537309 828935.9998 0.010970678 0.070920592 1.74E-05 4.759180704 -0.091384645 (ac)DSLNQTR ddPTM_A459_MK2206_30min_R1 1 DSLNQTR 7 0 A0A126GVR8;Q8NGC2 A0A126GVR8 OR4E2 Olfactory receptor 4E2 0 51.036 0.027541 4901900 169.56 205.41 99.577 96.004 174.51 288.99 203.6 192.17 147.47 172.56 FALSE TRUE 155.1380316 192.0377717 92.81799068 103.3982447 167.5588972 305.3523641 190.0182155 190.489878 162.8000342 193.9380356 0.799936078 0.990201696 0.478596117 0.533150934 0.863981615 1.574484155 0.979788286 0.982220313 0.839443556 1 7.599451966 -6.528537526 24.99753066 1.08490463 0.704474007 0.385273134 0.223577123 165.1637361 729599.8953 0.077400933 0.077621947 2.96E-07 6.528537526 -0.380430623 (ac)DSLWGPGAGS(ph)HPFGVHNSR ddPTM_A459_MK2206_30min_R1 1 DSLWGPGAGSHPFGVHNSR 19 0 Q3SYA9 Q3SYA9 POM121L1P Putative POM121-like protein 1 1 DSLWGPGAGS(0.999)HPFGVHNS(0.001)R 96.208 0.0033666 11059000 4073.1 1044.5 755.86 550.11 7793.7 7555.2 6950.2 4387.5 1060.5 1115.9 TRUE FALSE 3726.661456 976.5028602 704.5543291 592.4795675 7483.260426 7982.968895 6486.564839 4349.14055 1170.74277 1254.146117 2.971473106 0.77861969 0.561780099 0.472416698 5.966817045 6.36526222 5.172096579 3.467810084 0.933497903 1 10.29248973 -4.468408609 19.6380051 2.909153647 3.702608805 0 2.241921216 9602.601734 3169407.622 0.610324998 608137.3123 3.40E-05 4.468408609 0.793455158 (ac)EEEIAALVIDNGS(ph)GMCK ddPTM_A459_MK2206_30min_R1 1 EEEIAALVIDNGSGMCK 17 0 P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65 P63261 ACTG1 "Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 EEEIAALVIDNGS(1)GMCK 125.61 7.02E-08 4280900 1046.9 1135.6 1246 1075.8 1178.6 969.19 1636.6 1257 1167.1 871.92 TRUE FALSE 957.8556575 1061.672234 1161.424992 1158.658302 1131.653866 1024.0647 1527.4254 1246.010182 1288.424222 979.9400323 0.977463545 1.083405309 1.185200067 1.182376742 1.154819508 1.045027927 1.558692726 1.271516767 1.314799048 1 9.936549656 -7.204307275 24.99992911 1.308880901 1.113212729 0.282159644 0.139609141 328.3515804 143680.4364 0.051404097 0.039817434 6.25E-08 7.204307275 -0.195668172 (ac)EEEIAALVIDNGSGMCK ddPTM_A459_MK2206_30min_R1 7 EEEIAALVIDNGSGMCK 17 0 P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65 P63261 ACTG1 "Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 0 ;;;;;; 241.54 1.29E-174 254673600 11761.65 12332.03 12477.94 12311.97 12619.3 11788.51 11078.02 11007.05 8789.22 9703.84 FALSE TRUE 10761.2599 11529.21261 11630.9722 13260.24006 12116.64656 12455.96525 10339.0255 10910.81652 9702.890872 10906.02496 0.986726139 1.057141594 1.066472179 1.215863719 1.111004844 1.142117801 0.948010438 1.00043935 0.889681704 1 13.41283774 -7.269382435 24.70675796 0.959569475 1.099475508 0.533132894 0.062780727 439.0876277 1365768.051 0.027371783 0.018840926 5.38E-08 7.269382435 0.139906033 (ac)EEEIAALVIDNGSGMCK ddPTM_A459_MK2206_30min_R2 3 EEEIAALVIDNGSGMCK 17 0 P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65 P63261 ACTG1 "Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 0 ;; 209.19 3.07E-104 27020290 34329.5 38227.1 27673.7 36534.6 34811.1 28273.3 31781.8 34181.7 30697.5 34783.5 FALSE TRUE 36957.79291 36328.7978 28596.32735 33549.60631 33444.2413 29349.26024 27608.81148 38649.36555 33367.51306 33648.51724 1.098348336 1.079655235 0.849854011 0.997060467 0.993929125 0.872230417 0.820506035 1.148620169 0.991648839 1 15.03825531 -5.103146026 9.091452624 0.95912848 1.093688015 0.252939808 0.089453714 0.451170098 35.91644095 0.023596804 0.062861936 7.89E-06 5.103146026 0.134559535 (ac)EERMEMIS(ph)ERPK ddPTM_A459_MK2206_30min_R1 1 EERMEMISERPK 12 2 Q13118-2;Q13118-3;Q13118-4 Q13118-2 KLF10 Krueppel-like factor 10 1 EERMEMIS(1)ERPK 43.897 0.03783 15422000 3375 3975.5 3552 2552.9 3345.6 3146.2 3471.1 2974.2 3348.1 2700.4 TRUE FALSE 3087.938527 3716.694227 3310.900136 2749.5248 3212.337668 3324.335125 3239.549252 2948.196883 3696.146976 3034.945939 1.017460801 1.224632762 1.090925573 0.905955116 1.058449716 1.095352336 1.067415802 0.971416606 1.217862542 1 11.5674551 -5.526030257 24.99961009 1.043802754 1.130229896 0.104518926 0.09028591 170.0227903 1348715.754 0.023613129 0.041159856 2.98E-06 5.526030257 0.086427142 (ac)IATWMLFS(ph)LFTK ddPTM_A459_MK2206_30min_R1 1 IATWMLFSLFTK 12 0 C9JVY5 C9JVY5 AKAP2 1 IAT(0.006)WMLFS(0.775)LFT(0.219)K 56.956 0.028937 7069300 2751.3 592.69 628.51 495.27 6258.9 5410.6 4702.3 2133.7 253.76 313.34 TRUE FALSE 2517.287487 554.1057733 585.8484923 533.4157812 6009.59476 5716.943496 4388.618147 2115.045286 280.1392601 352.1589248 7.148157579 1.573453729 1.663591211 1.514701868 17.06500769 16.23398725 12.46203869 6.005939753 0.795491014 1 8.460082835 -3.885188911 16.25465697 6.997384071 8.234672278 0 6.163605213 0 0 1.562738124 0 0.00013026 3.885188911 1.237288207 (ac)KSKKEDGVK ddPTM_A459_MK2206_30min_R1 1 KSKKEDGVK 9 3 H3BRH3 H3BRH3 ZC3H18 0 54.205 0.045938 0 663.44 931.05 1114.7 906.48 625.33 560.38 859.36 754.65 755.32 702.55 FALSE TRUE 607.0109441 870.4384758 1039.03727 976.2972467 600.4217819 592.1082313 802.0336624 748.0521746 833.8382169 789.587198 0.768769992 1.102396895 1.315924666 1.236465395 0.76042492 0.749895937 1.015763255 0.947396534 1.056043233 1 9.624954789 -6.25478724 24.96685957 0.915081367 1.120642311 0.232655308 0.162838761 783.886424 2942086.543 0.051932422 0.065486124 5.56E-07 6.25478724 0.205560944 (ac)LLVY(ph)DLY(ph)LSPK ddPTM_A459_MK2206_30min_R1 1 LLVYDLYLSPK 11 0 K7EPD2 K7EPD2 LARP6 2 LLVY(0.996)DLY(0.933)LS(0.071)PK 63.159 0.034445 0 690.44 651.95 675.62 662.7 646.99 521.03 637.16 615.16 669.18 485.54 TRUE FALSE 631.7144524 609.5079365 629.7607968 713.7412688 621.2190183 550.5302683 594.656219 609.781721 738.7436557 545.6923608 1.157638438 1.116944235 1.154058297 1.307955398 1.138405195 1.008865632 1.089727952 1.117445954 1.353773131 1 9.091944037 -6.511932472 24.95699786 1.114660154 1.182947013 0.095824811 0.101785248 1418.117118 3233247.728 0.033408891 0.035644355 3.08E-07 6.511932472 0.068286859 (ac)MAAAMVPGRS(ph)ES(ph)WER ddPTM_A459_MK2206_30min_R1 1 MAAAMVPGRSESWER 15 1 O43598;O43598-2 O43598 DNPH1 2-deoxynucleoside 5-phosphate N-hydrolase 1 2 MAAAMVPGRS(1)ES(1)WER 69.03 0.015783 13548000 223.18 260.59 260.54 198.31 373.44 222.38 374.91 246.3 172.48 275.18 TRUE FALSE 204.197369 243.6255436 242.8552707 213.5838706 358.565094 234.9709634 349.900438 244.1466251 190.4099132 309.2713759 0.660253049 0.787740356 0.78524975 0.690603422 1.159386616 0.759756582 1.131370263 0.789425224 0.615672604 1 8.272729503 (ac)MAGVAAHRAHPPFT(ph)AHMK ddPTM_A459_MK2206_30min_R2 1 MAGVAAHRAHPPFTAHMK 18 1 H7BY33 H7BY33 CCDC88B 1 MAGVAAHRAHPPFT(1)AHMK 49.595 0.038692 3001700 7481.6 8889.4 6170.5 11313 8614.9 9979.6 10102 10459 9839.5 10668 TRUE FALSE 8054.397048 8447.965322 6376.22139 10388.69171 8276.63574 10359.38067 8775.595265 11826.02721 10695.32192 10319.90403 0.780472088 0.818608903 0.617856655 1.006665535 0.802007045 1.003825291 0.850356286 1.145943525 1.036378041 1 13.33314193 -6.691030363 0.689524018 1.054013373 0.753435643 0.488590769 0.106897294 0.605403194 0.637004567 0.07555026 0.083805034 2.04E-07 6.691030363 -0.300577729 (ac)MARQPEEEETAVARARR ddPTM_A459_MK2206_30min_R1 1 MARQPEEEETAVARARR 17 3 Q5VU97 Q5VU97 CACHD1 VWFA and cache domain-containing protein 1 0 64.842 0.012296 7168800 1616.8 1657 1449 1565.8 1700.8 1286.6 1560 1816.5 1142.1 1126.3 FALSE TRUE 1479.28267 1549.128999 1350.645917 1686.398187 1633.053534 1359.44618 1455.935246 1800.618532 1260.825382 1265.834547 1.16862245 1.223800537 1.06700036 1.332242188 1.290100304 1.073952503 1.150178157 1.422475422 0.996042796 1 10.30587313 -9.53424008 17.01697288 1.00000161 1.198029224 0.174962861 0.124115694 0 0 0.115013121 0.027894779 2.92E-10 9.53424008 0.198027614 (ac)MDDREDLVYQAK ddPTM_A459_MK2206_30min_R2 2 MDDREDLVYQAK 12 1 P62258;B4DJF2;I3L3T1;I3L0W5 P62258 YWHAE 14-3-3 protein epsilon 0 ; 73.233 0.0023222 24108600 43056 68216 55823 64749 65677 65699 58948 53248 53189 50058 FALSE TRUE 46352.40046 64828.49264 57684.11096 59458.79958 63098.19098 68199.22148 51208.05679 60207.69643 57815.28308 48424.61156 0.957207481 1.338750907 1.191214738 1.227863222 1.303019042 1.408358669 1.05747997 1.243328433 1.193923528 1 15.56345286 -9.350086874 0.850576045 0.996991374 1.227663065 0.209214208 0.124078018 6.005421293 4.966250335 0.167650093 0.039554284 4.47E-10 9.350086874 0.230671691 (ac)MDEETRHS(ph)LECIQANQIFPR ddPTM_A459_MK2206_30min_R2 1 MDEETRHSLECIQANQIFPR 20 1 Q13615-3;Q13615-2;Q13615;C9JLU3 Q13615-3 MTMR3 Myotubularin-related protein 3 1 MDEET(0.138)RHS(0.862)LECIQANQIFPR 62.765 7.72E-05 2567700 2025.4 1614 1920.9 1569.3 0 1999.8 1699.5 1598.1 1483.3 1912.4 TRUE FALSE 2180.466181 1533.851107 1984.941847 1441.08317 0 2075.90379 1476.353609 1806.977157 1612.314753 1849.998545 1.178631295 0.829109359 1.072942383 0.778964489 0 1.12211104 0.798029605 0.976745178 0.871522174 1 10.85330842 -5.773400798 23.13141422 0.772458345 1.007115804 0.111433605 0.298061085 202.9823605 392535.5027 0.086346815 0.129437101 1.68E-06 5.773400798 0.234657459 (ac)MDEPS(ph)PLAQPLELNQHSR ddPTM_A459_MK2206_30min_R1 1 MDEPSPLAQPLELNQHSR 18 0 Q13085;A0A0C4DGT1;A0A087X2F8;A0A087X126 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase 1 MDEPS(1)PLAQPLELNQHSR 170.48 1.71E-10 9805400 209.42 228.31 158.51 142.77 291.07 243.59 318.99 273.24 239.58 261.7 TRUE FALSE 191.6077293 213.4469775 147.7507828 153.7661701 279.4760655 257.3818553 297.7107591 270.8510915 264.4851983 294.1213717 0.65145803 0.725710533 0.5023463 0.522798358 0.95020659 0.875087226 1.012203763 0.920882049 0.899238287 1 8.200267808 -6.268628002 24.95835947 0.939051354 0.602499747 0.851196336 0.070112706 211.2686035 733507.6017 0.02289814 0.026502377 5.39E-07 6.268628002 -0.336551607 (ac)MDEPS(ph)PLAQPLELNQHSR ddPTM_A459_MK2206_30min_R2 2 MDEPSPLAQPLELNQHSR 18 0 Q13085;A0A0C4DGT1;A0A087X2F8;A0A087X126 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase 1 MDEPS(1)PLAQPLELNQHSR;MDEPS(1)PLAQPLELNQHSR 142.4 6.82E-08 8532500 2587.48 2588.8 610.2 2396.52 1722.64 3180.3 4477.3 2440.5 3178.2 3150.1 TRUE FALSE 2785.579458 2460.243956 630.5437634 2200.71665 1655.000498 3301.328545 3889.425132 2759.481729 3454.634091 3047.312495 0.914110208 0.807348757 0.206917986 0.722182793 0.543101668 1.083357401 1.276346006 0.905546029 1.133665844 1 11.57332174 -6.768295493 24.81037155 1.086164977 0.628746308 0.557259728 0.19642215 112.3715555 406638.6704 0.070263816 0.063335239 1.70E-07 6.768295493 -0.457418669 (ac)MDHT(ph)EGSPAEEPPAHAPSPGK ddPTM_A459_MK2206_30min_R2 1 MDHTEGSPAEEPPAHAPSPGK 21 0 D6R946;Q06330 D6R946 RBPJ Recombining binding protein suppressor of hairless 1 MDHT(0.412)EGS(0.33)PAEEPPAHAPS(0.258)PGK 52.185 0.007731 17131000 15837 13907 9781.4 18155 14541 39841 6262.1 15751 24001 37940 TRUE FALSE 17049.4929 13216.3986 10107.50699 16671.67843 13970.04728 41357.17717 5439.878748 17809.70978 26088.5636 36702.02091 0.464538259 0.360100024 0.275393745 0.454244154 0.380634279 1.126836511 0.148217417 0.485251475 0.710820902 1 15.16357188 -14.52287874 0.125884006 2.750117576 0.250669153 0.323461965 0.244340944 184.6746226 1.478032404 81.28451902 2.062624518 3.00E-15 14.52287874 -2.499448423 (ac)MDLAAAAEPGAGS(ph)QHLEVR ddPTM_A459_MK2206_30min_R1 4 MDLAAAAEPGAGSQHLEVR 19 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR 186.56 1.09E-37 46699400 347.992 270.16 187.95 0 289.77 180.69 361.258 181.654 0 123.306 TRUE FALSE 318.393453 252.5725349 175.1924777 0 278.2278473 190.9205117 337.159138 180.0658182 0 138.5820782 2.297508142 1.822548328 1.264178456 0 2.00767553 1.37767101 2.432920204 1.299344191 0 1 7.114596886 -8.079084405 6.74227671 0.52786075 1.563662079 0.287957693 0.680550951 0.351132606 24.99927896 0.481512188 0.180138564 8.34E-09 8.079084405 1.035801329 (ac)MDLAAAAEPGAGS(ph)QHLEVR ddPTM_A459_MK2206_30min_R2 4 MDLAAAAEPGAGSQHLEVR 19 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR 134.83 2.82E-15 25138400 530.58 2108.16 850.48 1571.88 1303.86 2091.26 627.76 763.88 655.97 1064.9 TRUE FALSE 571.2016127 2003.47184 878.8345787 1443.452376 1252.663905 2170.844365 545.3343579 863.7217388 713.0250849 1030.1524 0.554482631 1.944830531 0.853111228 1.40120275 1.215998628 2.107304088 0.529372506 0.838440738 0.692154952 1 10.00864207 -7.312941153 24.99999707 0.751528645 1.347544585 0.293469483 0.441559959 433.2222469 210293.1122 0.173842718 0.11720482 4.86E-08 7.312941153 0.59601594 (ac)MDLAAAAEPGAGS(ph)QHLEVRDEVAEK ddPTM_A459_MK2206_30min_R1 1 MDLAAAAEPGAGSQHLEVRDEVAEK 25 1 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 MDLAAAAEPGAGS(1)QHLEVRDEVAEK 48.198 0.00026091 3363900 493.07 456.12 441.3 447.37 430.74 569.42 506.76 562.21 213.36 273.9 TRUE FALSE 451.1318073 426.4265051 411.3457855 481.8265149 413.5827137 601.6600683 472.954965 557.2946572 235.5395355 307.8327998 1.465509223 1.385253635 1.336263666 1.565221494 1.343530364 1.954502797 1.536402116 1.810381017 0.765154121 1 8.26600315 -8.269420594 24.99074558 0.882576965 1.543745569 0.650547186 0.195520593 412.1445067 1290488.618 0.180334626 0.049929396 5.38E-09 8.269420594 0.661168604 (ac)MDLFGDLPEPERS(ph)PR ddPTM_A459_MK2206_30min_R1 5 MDLFGDLPEPERSPR 15 1 F8SNU6;E9PC05;F8SNU7;Q9H0C8 F8SNU6 ILKAP2;ILKAP;ILKAP3 Integrin-linked kinase-associated serine/threonine phosphatase 2C 1 MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR 117.48 0.00059496 33201000 644.51 481.59 525.775 309.96 996.787 669.721 613.817 511.165 389.732 430.725 TRUE FALSE 589.69104 450.2384035 490.0868579 333.8331729 957.0828631 707.6400243 572.8703879 506.6959383 430.2460361 484.0864648 1.218152299 0.93007848 1.012395292 0.689614763 1.977090732 1.46180502 1.183405093 1.046705444 0.888779314 1 8.919120946 -4.472294527 16.77931357 1.149672744 1.701340411 0.003344535 0.341024137 16112775.66 137352178 0.090298744 293087155.8 3.37E-05 4.472294527 0.551667668 (ac)MDLFGDLPEPERS(ph)PR ddPTM_A459_MK2206_30min_R2 4 MDLFGDLPEPERSPR 15 1 F8SNU6;E9PC05;F8SNU7;Q9H0C8 F8SNU6 ILKAP2;ILKAP;ILKAP3 Integrin-linked kinase-associated serine/threonine phosphatase 2C 1 MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR 101.78 0.0019719 9494800 2723.19 5045.47 4833.54 7689.85 7116.28 8107.55 5233.97 5304.53 6354.4 2250.86 TRUE FALSE 2931.67952 4794.919297 4994.687811 7061.564656 6836.859091 8416.088496 4546.743452 5997.850284 6907.094226 2177.414623 1.346403891 2.20211587 2.29386161 3.243096002 3.139897666 3.865174969 2.088138568 2.754574265 3.172153872 1 11.08840044 -4.933162864 1.464386219 2.84147848 1.061762294 0.230022463 0.74573167 1.148688687 2.828658834 0.208790584 2.765806338 1.17E-05 4.933162864 -1.779716187 (ac)MDLFGDLPEPERS(ph)PRPAAGK ddPTM_A459_MK2206_30min_R2 2 MDLFGDLPEPERSPRPAAGK 20 2 F8SNU6;E9PC05;F8SNU7;Q9H0C8 F8SNU6 ILKAP2;ILKAP;ILKAP3 Integrin-linked kinase-associated serine/threonine phosphatase 2C 1 MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK 47.113 0.0048564 33204600 36962 52684 48774 50740 52697 44442 43829 34107 42165 47292 TRUE FALSE 39791.83914 50067.78917 50400.10082 46594.37969 50627.851 46133.27145 38074.19965 38564.90201 45832.43548 45748.86591 0.869788537 1.094405034 1.101668857 1.018481634 1.106647126 1.008402515 0.832243574 0.842969574 1.001826703 1 15.48144836 -7.071463287 6.598915509 0.907050608 1.045125325 0.31278899 0.082593776 0.260197405 19.86938099 0.031179 0.024230856 8.48E-08 7.071463287 0.138074718 (ac)MDNYADLS(ph)DTELTTLLR ddPTM_A459_MK2206_30min_R1 1 MDNYADLSDTELTTLLR 17 0 P50402;Q5HY57;F8WEQ1 P50402 EMD Emerin 1 MDNYADLS(0.954)DT(0.045)ELT(0.001)TLLR 125.39 0.00045717 1087300 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)MDRNPS(ph)PPPPGR ddPTM_A459_MK2206_30min_R1 4 MDRNPSPPPPGR 12 1 E9PL53;E9PMD2;J3KND1;E9PRZ1;Q96ER3 E9PL53 SAAL1 Protein SAAL1 1 MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR 87.719 0.0027423 359594000 1381.35 850.99 824.96 661.92 1155.84 1331.89 1265.443 1057.96 555.59 701.53 TRUE FALSE 1263.858929 795.5903963 768.9640137 712.9011931 1109.800445 1407.300461 1181.027606 1048.710367 613.3455687 788.4408327 1.602985128 1.009067977 0.975297044 0.904191112 1.407588749 1.784915751 1.497928009 1.330106615 0.777922126 1 9.622858684 -6.284991115 24.44163292 1.350416722 1.104213449 0.056162199 0.312925925 1353.897745 1405050.211 0.101416553 0.115069443 5.19E-07 6.284991115 -0.246203273 (ac)MDRNPS(ph)PPPPGR ddPTM_A459_MK2206_30min_R2 5 MDRNPSPPPPGR 12 1 E9PL53;E9PMD2;J3KND1;E9PRZ1;Q96ER3 E9PL53 SAAL1 Protein SAAL1 1 MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR 99.973 0.0017987 398549000 18735.2 26257.8 23241 26029.5 28955.7 36575 20003.6 26427.7 28344.6 21497.1 TRUE FALSE 20169.58132 24953.87583 24015.84334 23902.80659 27818.75373 37966.88725 17377.10329 29881.89113 30809.96207 20795.65139 0.969894183 1.199956441 1.154849295 1.149413699 1.337719757 1.825712816 0.835612358 1.436929797 1.481557923 1 14.34399426 -6.241178963 5.489497471 1.342964134 1.125135453 0.123492952 0.258247262 0.37905204 38.17359114 0.077105086 0.09654836 5.74E-07 6.241178963 -0.21782868 (ac)MDS(ph)AGQDINLNSPNKGLLSDSMTDVPVDTGVAAR ddPTM_A459_MK2206_30min_R1 2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAAR 34 1 O43399;O43399-5;O43399-7;A0A087WYR3;A0A087WZ51;O43399-2;O43399-4;O43399-3 O43399;O43399-2 TPD52L2 Tumor protein D54 1 MDS(0.499)AGQDINLNS(0.499)PNKGLLS(0.002)DSMTDVPVDTGVAAR;MDS(0.499)AGQDINLNS(0.499)PNKGLLS(0.002)DSMTDVPVDTGVAAR 71.906 1.13E-20 35955000 583.24 518.85 357.13 461.04 570.59 358.12 409.61 412.26 274.81 294.9 TRUE FALSE 533.6323753 485.0727707 332.8890106 496.5493807 547.8621921 378.3964449 382.2856643 408.6556543 303.3774829 331.4344384 1.610069183 1.463555728 1.004388718 1.498182817 1.653003215 1.141693201 1.153427707 1.232990924 0.915346892 1 8.372579706 -7.464387659 1.016969731 0.996711153 1.417915897 0.454445524 0.188664795 0.574777458 1.109517143 0.158264319 0.07699906 3.43E-08 7.464387659 0.421204744 (ac)MDS(ph)AGQDINLNSPNKGLLSDSMTDVPVDTGVAAR ddPTM_A459_MK2206_30min_R2 2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAAR 34 1 O43399;O43399-5;O43399-7;A0A087WYR3;A0A087WZ51;O43399-2;O43399-4;O43399-3 O43399;O43399-2 TPD52L2 Tumor protein D54 1 MDS(0.752)AGQDINLNS(0.237)PNKGLLS(0.007)DS(0.002)MT(0.002)DVPVDTGVAAR;MDS(0.915)AGQDINLNS(0.076)PNKGLLS(0.005)DS(0.001)MT(0.002)DVPVDTGVAAR 55.662 7.82E-12 6593400 2037.15 2449.2 1643.1 2733.43 2817.2 4330.7 2416.42 3116.16 2774.3 6463.7 TRUE FALSE 2193.11577 2327.576289 1697.880134 2510.100025 2706.582573 4495.507823 2099.141151 3523.452811 3015.603599 6252.789998 0.350741952 0.372246036 0.271539606 0.401436803 0.432859983 0.718960308 0.335712722 0.563500903 0.482281286 1 12.61028435 -14.52287875 0.146989348 3.000854519 0.255392396 0.733822576 0.107455407 70.18064186 0.616325543 40.92656931 0.580091659 3.00E-15 14.52287875 -2.745462123 (ac)MDSAGQDINLNS(ph)PNK ddPTM_A459_MK2206_30min_R1 2 MDSAGQDINLNSPNK 15 0 O43399;O43399-5;O43399-7;A0A087WYR3;A0A087WZ51;O43399-2;O43399-4;O43399-3 O43399;O43399-2 TPD52L2 Tumor protein D54 1 MDSAGQDINLNS(1)PNK;MDSAGQDINLNS(1)PNK 264.31 6.72E-96 25119000 7556.3 7734.2 7538.2 4857.6 4294.8 4082.2 6514.6 4863 7746.1 9279.5 TRUE FALSE 6913.597005 7230.702174 7026.527987 5231.733194 4123.729022 4313.330636 6080.022921 4820.483304 8551.334815 10429.11452 0.662913136 0.693318897 0.67374157 0.501646922 0.395405479 0.413585509 0.582985536 0.462214054 0.819948309 1 13.34832905 -8.465788693 3.750403252 0.997736613 0.548142558 0.68368597 0.101827942 0.12878589 3.742048286 0.111766617 0.029431246 3.42E-09 8.465788693 -0.449594055 (ac)MDSAGQDINLNS(ph)PNK ddPTM_A459_MK2206_30min_R2 7 MDSAGQDINLNSPNK 15 0 O43399;O43399-5;O43399-7;A0A087WYR3;A0A087WZ51;O43399-2;O43399-4;O43399-3 O43399;O43399-2 TPD52L2 Tumor protein D54 1 MDSAGQDINLNS(1)PNK;MDSAGQDINLNS(1)PNK;MDSAGQDINLNS(1)PNK;MDSAGQDINLNS(1)PNK;MDSAGQDINLNS(1)PNK;MDSAGQDINLNS(1)PNK;MDSAGQDINLNS(1)PNK 235.93 7.71E-68 49976900 562593 331891 342138 285454.8 282582.1 215151.2 385069 303304 205259.5 410296 TRUE FALSE 605665.5526 315409.7756 353544.7102 262132.2297 271486.5069 223338.9297 334508.9777 342946.8742 223112.6003 396908.0751 1.52595926 0.794667066 0.890747083 0.660435618 0.684003486 0.562696865 0.84278703 0.8640461 0.562126634 1 18.59844539 -4.240622723 1.655127201 0.738664088 3.857620623 0.726176018 0.139631942 2.646029485 2.012924388 0.03715501 20.65649001 5.75E-05 4.240622723 3.118956536 (ac)MDSAGQDINLNS(ph)PNKGLLSDSMTDVPVDTGVAAR ddPTM_A459_MK2206_30min_R2 2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAAR 34 1 O43399;O43399-5;O43399-7;A0A087WYR3;A0A087WZ51;O43399-2;O43399-4;O43399-3 O43399;O43399-2 TPD52L2 Tumor protein D54 1 MDS(0.248)AGQDINLNS(0.746)PNKGLLS(0.002)DS(0.001)MT(0.003)DVPVDTGVAAR;MDS(0.415)AGQDINLNS(0.57)PNKGLLS(0.012)DS(0.002)MTDVPVDTGVAAR 55.702 3.27E-19 7344000 2598 1733.5 2574 3148.23 2426.3 2703.1 2416.6 2091.91 1170.1 2123.31 TRUE FALSE 2796.904878 1647.416911 2659.815875 2891.009538 2331.031271 2805.968365 2099.297517 2365.32982 1271.873183 2054.026569 1.361669279 0.802042649 1.294927688 1.407484004 1.134859357 1.366081826 1.022040099 1.151557558 0.619209704 1 11.00423913 -8.150291464 6.322458232 0.813037638 1.191030361 0.386699353 0.193284773 0.229717105 11.08916816 0.130631013 0.048267191 7.07E-09 8.150291464 0.377992723 (ac)MDT(ph)PLRR ddPTM_A459_MK2206_30min_R1 1 MDTPLRR 7 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 MDT(1)PLRR 62.107 0.017441 9625700 214.93 264.96 154.23 168.55 185.4 120.45 228.07 0 135.75 195.19 TRUE FALSE 196.6490749 247.7110558 143.7612973 181.5317502 178.0151254 127.2697749 212.8558664 0 149.8616983 219.3716108 0.896419888 1.129184651 0.655332277 0.827507942 0.811477496 0.580156085 0.970298142 0 0.683140803 1 7.777233026 -5.908339329 0.674010131 0.588081354 1.023004212 0.134165379 0.277678286 1.743278567 1.456132602 0.157492671 0.476267456 1.23E-06 5.908339329 0.434922859 (ac)MDT(ph)PLRR ddPTM_A459_MK2206_30min_R2 1 MDTPLRR 7 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 MDT(1)PLRR 63.419 0.033806 73549000 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)MDVAES(ph)PERDPHSPEDEEQPQGLSDDDILR ddPTM_A459_MK2206_30min_R1 2 MDVAESPERDPHSPEDEEQPQGLSDDDILR 30 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 MDVAES(0.827)PERDPHS(0.173)PEDEEQPQGLSDDDILR;MDVAES(0.5)PERDPHS(0.5)PEDEEQPQGLSDDDILR 103.85 3.27E-18 40560000 474.14 310.65 486.27 238.58 620.54 472.53 403.88 397.62 444.94 397.45 TRUE FALSE 433.8119032 290.4266285 453.2633472 256.9554729 595.8225778 499.2842402 376.9379021 394.1436503 491.1931052 446.6891066 0.971171888 0.650176206 1.01471771 0.575244547 1.333864133 1.117744384 0.843848432 0.882366828 1.099630813 1 8.803127262 -6.25064377 24.98333041 1.03381618 0.807058953 0.312964271 0.176061886 988.6968955 2288053.653 0.052433755 0.066989571 5.62E-07 6.25064377 -0.226757227 (ac)MDVAES(ph)PERDPHSPEDEEQPQGLSDDDILR ddPTM_A459_MK2206_30min_R2 2 MDVAESPERDPHSPEDEEQPQGLSDDDILR 30 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 MDVAES(0.5)PERDPHS(0.5)PEDEEQPQGLS(0.001)DDDILR;MDVAES(0.567)PERDPHS(0.433)PEDEEQPQGLSDDDILR 52.96 4.83E-07 14745600 5020.4 8785.7 5373.2 8431.8 3634.1 4879.9 8776.8 2364 2749 3850.8 TRUE FALSE 5404.765684 8349.414914 5552.339806 7742.894968 3491.406974 5065.608014 7624.395617 2672.982917 2988.103051 3725.148711 1.450885885 2.241364187 1.490501517 2.078546541 0.937253045 1.359840481 2.046735905 0.71755066 0.802143292 1 11.86308231 -7.317999211 0.571773673 0.824406006 1.822902437 0.354350943 0.424783701 0.931721588 0.630831453 0.397970269 0.299833011 4.81E-08 7.317999211 0.998496431 (ac)MECADVPLLT(ph)PS(ph)S(ph)K ddPTM_A459_MK2206_30min_R2 1 MECADVPLLTPSSK 14 0 V9GYD6 V9GYD6 ETS1 3 MECADVPLLT(1)PS(1)S(1)K 45.137 0.038396 10704000 16632 25285 20816 18783 18478 20487 23919 17015 19886 13579 TRUE FALSE 17905.35871 24029.38367 21509.99505 17248.36882 17752.46088 21266.64714 20778.40657 19238.91892 21615.64833 13135.91834 1.363083893 1.829288447 1.637494577 1.313069126 1.351444217 1.618969195 1.581800832 1.464604028 1.64553766 1 13.68122944 -10.68032084 4.52002764 0.999919247 1.535663128 0.520801958 0.153637287 113615608.1 16.06753151 98469.11624 0.03844584 2.09E-11 10.68032084 0.535743881 (ac)MEDLDQS(ph)PLVSSSDSPPRPQPAFK ddPTM_A459_MK2206_30min_R1 4 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 1 MEDLDQS(0.709)PLVS(0.061)S(0.201)S(0.018)DS(0.01)PPRPQPAFK;MEDLDQS(0.491)PLVS(0.491)S(0.016)SDSPPRPQPAFK;MEDLDQS(0.475)PLVS(0.196)S(0.076)S(0.039)DS(0.214)PPRPQPAFK;MEDLDQS(0.747)PLVS(0.047)S(0.047)S(0.016)DS(0.143)PPRPQPAFK 101.49 6.60E-08 318395000 18504.31 16101.18 14245.55 15429.48 19416.02 15089.41 18354.39 15487.47 16236.01 14495.76 TRUE FALSE 16930.42126 15052.99026 13278.60176 16617.86122 18642.63881 15943.75935 17130.00213 15352.06468 17923.80134 16291.60419 1.039211429 0.923972255 0.815057965 1.020026084 1.144309584 0.978648829 1.051461964 0.942329835 1.100186399 1 13.99184105 -5.968696213 24.98965765 1.035799394 0.924481665 0.310705305 0.073882698 232.4731977 185580.6902 0.020683574 0.03067842 1.07E-06 5.968696213 -0.111317729 (ac)MEDLDQSPLVS(ph)SSDSPPRPQPAFK ddPTM_A459_MK2206_30min_R1 1 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 1 MEDLDQS(0.033)PLVS(0.274)S(0.222)S(0.274)DS(0.198)PPRPQPAFK 58.712 0.00016739 8014300 672.59 677.32 765.91 654.53 792.08 597.22 697.5 526.74 561.22 420.64 TRUE FALSE 615.3826886 633.2263449 713.9221631 704.942014 760.5297763 631.0340803 650.9710477 522.1347677 619.5608273 472.7520589 1.301702821 1.339447038 1.51014078 1.491145307 1.608728639 1.334809798 1.376981941 1.104457946 1.310540728 1 8.884939931 -7.953837515 0.913235065 1.058197298 1.44777397 0.575753279 0.112584043 0.409264144 0.642315848 0.106825364 0.041758399 1.11E-08 7.953837515 0.389576672 (ac)MEDLDQSPLVS(ph)SSDSPPRPQPAFK ddPTM_A459_MK2206_30min_R2 4 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 1 MEDLDQS(0.068)PLVS(0.407)S(0.407)S(0.011)DS(0.108)PPRPQPAFK;MEDLDQS(0.054)PLVS(0.302)S(0.302)S(0.122)DS(0.221)PPRPQPAFK;MEDLDQS(0.02)PLVS(0.451)S(0.451)S(0.018)DS(0.059)PPRPQPAFK;MEDLDQS(0.003)PLVS(0.479)S(0.479)S(0.03)DS(0.009)PPRPQPAFK 71.001 3.27E-06 98749600 342806 248258 280636 250354 275236 335281 359199 175666.1 330930 271545 TRUE FALSE 369051.4909 235929.8687 289992.2642 229899.2774 264428.8517 348040.3534 312035.7398 198626.2624 359713.6932 262684.5089 1.404922934 0.898149151 1.103956474 0.875191607 1.006640448 1.324936727 1.187872635 0.756139992 1.369375357 1 18.0029716 -8.694085301 0.005048655 0.000148699 2.139210511 0.005027004 0.211970009 99089.37148 278.9659377 59604.75172 58570.31913 2.02E-09 8.694085301 2.139061812 (ac)MEDLDQSPLVSS(ph)SDSPPRPQPAFK ddPTM_A459_MK2206_30min_R1 4 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 1 MEDLDQS(0.003)PLVS(0.246)S(0.554)S(0.059)DS(0.138)PPRPQPAFK;MEDLDQSPLVS(0.483)S(0.502)S(0.01)DS(0.005)PPRPQPAFK;MEDLDQS(0.276)PLVS(0.133)S(0.575)S(0.016)DSPPRPQPAFK;MEDLDQS(0.201)PLVS(0.201)S(0.298)S(0.203)DS(0.097)PPRPQPAFK 112.48 4.07E-08 409197600 13444.5 12458.6 11526.7 11150.8 14106.6 11151.2 13062.9 11705 12221.7 10677.3 TRUE FALSE 12300.97468 11647.54288 10744.29972 12009.63655 13544.70425 11782.57131 12191.49778 11602.66442 13492.18945 12000.08453 1.025074002 0.970621735 0.895352003 1.000795996 1.128717403 0.981874026 1.015950991 0.96688189 1.124341201 1 13.55075695 -5.997131302 24.98616137 1.033978039 0.961659405 0.236152031 0.058596636 129.6913554 1129573.103 0.016402862 0.024169009 1.01E-06 5.997131302 -0.072318634 (ac)MEDLDQSPLVSS(ph)SDSPPRPQPAFK ddPTM_A459_MK2206_30min_R2 2 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 1 MEDLDQS(0.002)PLVS(0.231)S(0.632)S(0.092)DS(0.044)PPRPQPAFK;MEDLDQSPLVS(0.085)S(0.765)S(0.019)DS(0.131)PPRPQPAFK 79.695 8.63E-07 45347000 115509 83750 91200 78639 80022 100379 111165 55715 96997 86484 TRUE FALSE 124352.4579 79591.09678 94240.56248 72213.94215 76879.9342 104198.9932 96568.90197 62997.1418 105433.6237 83662.03416 1.486366655 0.951340684 1.126443594 0.863162638 0.918934556 1.245475253 1.154273894 0.752995578 1.260232611 1 16.35228546 -4.755614075 24.97733149 1.027495676 1.486367404 0.429791524 0.157556911 180.0684742 772006.1531 0.03821352 0.333901613 1.76E-05 4.755614075 0.458871728 (ac)MEDLDQSPLVSSS(ph)DSPPRPQPAFK ddPTM_A459_MK2206_30min_R1 1 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 1 MEDLDQS(0.011)PLVS(0.212)S(0.212)S(0.484)DS(0.082)PPRPQPAFK 73.435 1.74E-05 8485000 2193.2 2227.6 1890.9 2107.3 2759.1 2100.8 2681.5 2252.3 2074 1738.1 TRUE FALSE 2006.656823 2082.582835 1762.550976 2269.604611 2649.199205 2219.745481 2502.622028 2232.608379 2289.599722 1953.42895 1.027248431 1.0661165 0.902285684 1.16185675 1.356178941 1.136332847 1.281143104 1.142917626 1.172092654 1 10.93179307 -5.899629963 7.094432686 1.197217241 1.006518606 0.416322206 0.096667235 0.194212563 11.98636805 0.026050836 0.038865984 1.26E-06 5.899629963 -0.190698635 (ac)MEDLDQSPLVSSS(ph)DSPPRPQPAFK ddPTM_A459_MK2206_30min_R2 1 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 1 MEDLDQSPLVS(0.005)S(0.051)S(0.793)DS(0.151)PPRPQPAFK 65.118 3.80E-05 7400700 62501 49899 52336 46393 49203 61403 76306 32316 61491 48941 TRUE FALSE 67286.12462 47421.08822 54080.85612 42602.5435 47271.04299 63739.73419 66286.93054 36539.81216 66839.37603 47344.05918 1.421215793 1.001627005 1.142294452 0.899849828 0.998457754 1.346309026 1.400110842 0.771792972 1.411779581 1 15.53089578 -6.726958635 24.99690512 1.185118131 1.079672604 0.040597031 0.222324712 652.7267081 473194.3617 0.07234119 0.072337776 1.88E-07 6.726958635 -0.105445527 (ac)MEDLDQSPLVSSSDS(ph)PPRPQPAFK ddPTM_A459_MK2206_30min_R1 3 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 1 MEDLDQS(0.092)PLVS(0.078)S(0.078)S(0.249)DS(0.502)PPRPQPAFK;MEDLDQS(0.276)PLVS(0.099)S(0.099)S(0.035)DS(0.492)PPRPQPAFK;MEDLDQS(0.095)PLVS(0.095)S(0.122)S(0.06)DS(0.627)PPRPQPAFK 81.974 6.74E-08 280139300 5968.6 5613.9 4655.49 4669.35 5830 4600.2 5230.4 4382.45 5157.6 3974 TRUE FALSE 5460.939228 5248.43409 4339.48831 5028.984146 5597.778755 4860.659349 4881.489559 4344.134702 5693.750977 4466.329122 1.222690733 1.17511136 0.971600657 1.125977063 1.253328763 1.088289559 1.092953391 0.972640973 1.274816705 1 12.12487385 -9.196734179 0.01370416 1.09E-06 2.152373468 0.105493868 0.101506053 3632.360731 18.50494305 1509.559335 1394.682933 6.36E-10 9.196734179 2.152372381 (ac)MEDLDQSPLVSSSDS(ph)PPRPQPAFK ddPTM_A459_MK2206_30min_R2 1 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 1 MEDLDQS(0.004)PLVS(0.137)S(0.346)S(0.137)DS(0.375)PPRPQPAFK 56.055 0.00015911 36509000 38687 22768 26560 22283 22655 29048 34258 17623 24881 28729 TRUE FALSE 41648.90647 21637.37423 27445.49714 20462.40762 21765.45087 30153.44199 29759.88345 19926.38661 27045.10441 27791.57508 1.498616266 0.77855876 0.987547379 0.736280961 0.78316723 1.084984997 1.070823923 0.716993785 0.973140397 1 14.76235998 -4.754349988 24.99960607 0.899196572 1.498617303 0.645233681 0.132349506 158.816056 559991.0625 0.033265035 0.327737403 1.76E-05 4.754349988 0.599420731 (ac)MEDMNEYSNIEEFAEGSK ddPTM_A459_MK2206_30min_R1 1 MEDMNEYSNIEEFAEGSK 18 0 O14979-3;O14979-2;A0A087WU03 O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like 0 113.99 0.0032662 1722800 1362.1 1139 1065.4 1138.3 1548.1 1084 1201 1240 985.53 852.87 FALSE TRUE 1246.246242 1064.850893 993.0836164 1225.972063 1486.435899 1145.375143 1120.883481 1229.158811 1087.97937 958.5299744 1.30016408 1.110920807 1.036048577 1.279012755 1.550745348 1.194928874 1.1693776 1.282337374 1.135049919 1 9.904679737 -8.552898611 3.758035753 1.000208818 1.23659394 0.251008139 0.130027329 0.340482718 14.43022695 0.135333604 0.035566732 2.80E-09 8.552898611 0.236385122 (ac)MEDS(ph)MDMDMSPLRPQNYLFGCELK ddPTM_A459_MK2206_30min_R1 13 MEDSMDMDMSPLRPQNYLFGCELK 24 1 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 MEDS(0.998)MDMDMS(0.002)PLRPQNYLFGCELK;MEDS(0.526)MDMDMS(0.468)PLRPQNY(0.005)LFGCELK;MEDS(0.722)MDMDMS(0.178)PLRPQNY(0.1)LFGCELK;MEDS(0.594)MDMDMS(0.203)PLRPQNY(0.203)LFGCELK;MEDS(0.51)MDMDMS(0.487)PLRPQNY(0.003)LFGCELK;MEDS(0.508)MDMDMS(0.485)PLRPQNY(0.007)LFGCELK;MEDS(0.596)MDMDMS(0.365)PLRPQNY(0.038)LFGCELK;MEDS(0.503)MDMDMS(0.483)PLRPQNY(0.014)LFGCELK;MEDS(0.505)MDMDMS(0.494)PLRPQNY(0.001)LFGCELK;MEDS(0.5)MDMDMS(0.5)PLRPQNYLFGCELK;MEDS(0.773)MDMDMS(0.169)PLRPQNY(0.058)LFGCELK;MEDS(0.397)MDMDMS(0.595)PLRPQNY(0.008)LFGCELK;MEDS(0.621)MDMDMS(0.378)PLRPQNY(0.001)LFGCELK 82.037 3.22E-07 262035000 29780.18 30390.95 31387.851 27160.15 31042.89 26563.8 29271.39 28832.67 26705.65 22222.08 TRUE FALSE 27247.21931 28412.49363 29257.33113 29252.02946 29806.38596 28067.8194 27318.74898 28580.58901 29481.79788 24975.11904 1.090974552 1.13763196 1.171459126 1.171246848 1.193443199 1.123831256 1.09383859 1.144362474 1.180446741 1 14.60820393 -10.48072078 5.71747063 0.999999842 1.145809344 0.632437057 0.03321675 7.27E-08 1.33E-08 0.034444858 0.008354096 3.31E-11 10.48072078 0.145809502 (ac)MEDS(ph)MDMDMSPLRPQNYLFGCELK ddPTM_A459_MK2206_30min_R2 16 MEDSMDMDMSPLRPQNYLFGCELK 24 1 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 MEDS(0.869)MDMDMS(0.131)PLRPQNYLFGCELK;MEDS(0.508)MDMDMS(0.485)PLRPQNY(0.007)LFGCELK;MEDS(0.556)MDMDMS(0.442)PLRPQNY(0.002)LFGCELK;MEDS(0.758)MDMDMS(0.223)PLRPQNY(0.019)LFGCELK;MEDS(0.51)MDMDMS(0.483)PLRPQNY(0.008)LFGCELK;MEDS(0.69)MDMDMS(0.255)PLRPQNY(0.055)LFGCELK;MEDS(0.837)MDMDMS(0.162)PLRPQNY(0.002)LFGCELK;MEDS(0.883)MDMDMS(0.116)PLRPQNY(0.001)LFGCELK;MEDS(0.51)MDMDMS(0.483)PLRPQNY(0.008)LFGCELK;MEDS(0.913)MDMDMS(0.087)PLRPQNYLFGCELK;MEDS(0.47)MDMDMS(0.442)PLRPQNY(0.088)LFGCELK;MEDS(0.51)MDMDMS(0.489)PLRPQNY(0.001)LFGCELK;MEDS(0.808)MDMDMS(0.182)PLRPQNY(0.01)LFGCELK;MEDS(0.527)MDMDMS(0.466)PLRPQNY(0.007)LFGCELK;MEDS(0.243)MDMDMS(0.394)PLRPQNY(0.363)LFGCELK;MEDS(0.585)MDMDMS(0.415)PLRPQNY(0.001)LFGCELK 81.12 4.87E-05 369735000 855546.2 1021504.3 942245.5 1063511.8 1099073.5 994564.6 1114082.9 816216.4 923044.8 946768.3 TRUE FALSE 921047.4749 970777.8819 973659.4947 976619.4839 1055918.352 1032413.453 967802.477 922898.686 1003329.568 915875.3279 1.005647217 1.059945445 1.063091739 1.066323608 1.152906209 1.127242345 1.056696744 1.007668465 1.095487058 1 19.8047917 -10.37740262 5.230371034 0.999999927 1.071732384 0.188974833 0.043789477 4.03E-08 8.87E-09 0.04577161 0.011101235 4.19E-11 10.37740262 0.071732457 (ac)MEDSMDMDMS(ph)PLRPQNYLFGCELK ddPTM_A459_MK2206_30min_R1 7 MEDSMDMDMSPLRPQNYLFGCELK 24 1 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 MEDS(0.271)MDMDMS(0.722)PLRPQNY(0.007)LFGCELK;MEDS(0.456)MDMDMS(0.471)PLRPQNY(0.073)LFGCELK;MEDS(0.426)MDMDMS(0.537)PLRPQNY(0.037)LFGCELK;MEDS(0.51)MDMDMS(0.489)PLRPQNY(0.001)LFGCELK;MEDS(0.508)MDMDMS(0.487)PLRPQNY(0.005)LFGCELK;MEDS(0.512)MDMDMS(0.488)PLRPQNY(0.001)LFGCELK;MEDS(0.502)MDMDMS(0.492)PLRPQNY(0.006)LFGCELK 71.174 7.69E-05 105469020 22369.2 24141.4 24424.3 21407.8 22787.1 19336.1 20576 22435.6 20355.4 17016.9 TRUE FALSE 20466.58207 22569.79047 22766.44657 23056.63247 21879.44155 20430.89327 19203.41258 22239.44791 22471.41667 19125.08204 1.070143492 1.180114701 1.190397328 1.205570382 1.14401818 1.068277418 1.004095697 1.162841961 1.174970995 1 14.22317832 -6.623309073 5.130303497 1.087754649 1.166021562 0.264970272 0.063188049 0.31538126 13.28530615 0.022036112 0.022000135 2.38E-07 6.623309073 0.078266913 (ac)MEDSMDMDMS(ph)PLRPQNYLFGCELK ddPTM_A459_MK2206_30min_R2 3 MEDSMDMDMSPLRPQNYLFGCELK 24 1 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 MEDS(0.489)MDMDMS(0.507)PLRPQNY(0.004)LFGCELK;MEDS(0.468)MDMDMS(0.488)PLRPQNY(0.045)LFGCELK;MEDS(0.49)MDMDMS(0.51)PLRPQNYLFGCELK 61.732 0.0026073 35430800 58018 74687 62316 73011 71338 62889 70642 54602 62125 65763 TRUE FALSE 62459.90269 70978.15219 64393.58434 67045.76775 68536.91168 65282.28496 61366.62054 61738.66888 67528.5202 63617.1587 0.981809059 1.115707674 1.012204658 1.053894407 1.077333743 1.026174169 0.964623724 0.970471963 1.061482807 1 15.95712832 -7.00378076 23.26012774 0.996500374 1.050408175 0.236416853 0.041346191 83.93785557 516410.9359 0.014145506 0.012179098 9.91E-08 7.00378076 0.053907801 (ac)MEDSMDMDMSPLRPQNY(ph)LFGCELK ddPTM_A459_MK2206_30min_R2 1 MEDSMDMDMSPLRPQNYLFGCELK 24 1 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 MEDS(0.151)MDMDMS(0.133)PLRPQNY(0.717)LFGCELK 51.645 0.0033443 16110000 31711 40645 34746 37749 38352 36155 41275 32985 34529 35849 TRUE FALSE 34138.81854 38626.6284 35904.4143 34664.78595 36846.10778 37530.90386 35855.54292 37296.25275 37532.27001 34679.25007 0.984416286 1.113825366 1.035328452 0.999582917 1.062482831 1.082229396 1.033919213 1.07546307 1.08226879 1 15.08178508 (ac)MEEIKVLRRVK ddPTM_A459_MK2206_30min_R2 1 MEEIKVLRRVK 11 3 Q6EMB2-2 Q6EMB2-2 0 53.775 0.044499 0 838.6 3597.3 778.84 3652.3 2172.1 5626.3 1031 661.26 4260.5 773.33 FALSE TRUE 902.8038608 3418.663313 804.8061369 3353.895407 2086.81244 5840.412789 895.6284615 747.6889524 4631.070589 748.0963054 1.206801657 4.569817132 1.075805523 4.483240169 2.789497054 7.807033328 1.197210112 0.999455481 6.190473814 1 9.547080196 -5.779854806 24.99963 3.549746623 2.512707764 0.051844506 2.304099076 910.6436033 1236229.707 0.640837114 0.952490235 1.66E-06 5.779854806 -1.037038859 (ac)MEGAAAPVAGDRPDLGLGAPGS(ph)PR ddPTM_A459_MK2206_30min_R2 1 MEGAAAPVAGDRPDLGLGAPGSPR 24 1 O60285;O60285-2 O60285 NUAK1 NUAK family SNF1-like kinase 1 1 MEGAAAPVAGDRPDLGLGAPGS(1)PR 47.05 0.00010535 3600900 586.32 0 0 1213.6 1005.3 1150.9 919.53 0 0 653.51 TRUE FALSE 631.20911 0 0 1114.444998 965.8268708 1194.698306 798.7946064 0 0 632.1860222 0.998454708 0 0 1.762843465 1.527757395 1.889789182 1.263543606 0 0 1 9.304205327 -5.743098701 24.99971458 1.083870609 0.299536346 0.203444994 0.660631881 422.024246 575246.0466 0.201658178 0.348445003 1.81E-06 5.743098701 -0.784334263 (ac)MEGIS(ph)NFKTPSK ddPTM_A459_MK2206_30min_R1 1 MEGISNFKTPSK 12 1 Q96KB5;Q96KB5-2;E5RIE1 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 MEGIS(1)NFKTPSK 104.2 0.0037531 10130000 3632.2 3722.1 3118 2956.8 2774.5 2733.3 3293.2 2707.5 2830.2 2513.6 TRUE FALSE 3323.262317 3479.790613 2906.358847 3184.533248 2663.98579 2888.057084 3073.516637 2683.828613 3124.409418 2825.003745 1.176374482 1.231782655 1.028798228 1.127266912 0.943002569 1.022319737 1.087969049 0.950026568 1.105984169 1 11.46403706 -5.26624676 24.88986858 1.033095943 1.204078575 0.571967389 0.059139017 228.667049 1183913.45 0.014765974 0.032455852 5.42E-06 5.26624676 0.170982633 (ac)MEGIS(ph)NFKTPSK ddPTM_A459_MK2206_30min_R2 1 MEGISNFKTPSK 12 1 Q96KB5;Q96KB5-2;E5RIE1 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 MEGIS(0.748)NFKT(0.214)PS(0.038)K 85.807 0.0015311 32146000 51636 49587 42823 51001 53603 34017 51563 38214 35171 54600 TRUE FALSE 55589.29186 47124.58169 44250.69745 46834.05516 51498.27689 35311.54077 44792.71616 43208.70101 38230.11001 52818.40647 1.052460602 0.892199989 0.837789331 0.88669951 0.975006259 0.668546121 0.84805126 0.818061428 0.723802791 1 15.68875316 -6.733176217 24.99998234 0.802593419 0.919397548 0.26095412 0.097323495 296.1897369 261991.8616 0.031023111 0.031017437 1.85E-07 6.733176217 0.116804128 (ac)MEGNKTWIT(ph)DIT(ph)LPR ddPTM_A459_MK2206_30min_R1 1 MEGNKTWITDITLPR 15 1 A0A4W9AIG4;Q96R47 A0A4W9AIG4 OR2A14 Olfactory receptor 2A14 2 MEGNKTWIT(1)DIT(1)LPR 63.827 0.024868 2494400 1144.5 1300.4 1138 1077.6 1282.6 1093.4 893.05 892.72 990.03 784.96 TRUE FALSE 1047.154265 1215.743724 1060.755731 1160.596939 1231.511326 1155.307363 833.476264 884.9150432 1092.947161 882.2067709 1.186971467 1.378071178 1.202389015 1.315561133 1.395944088 1.309565287 0.944762942 1.003069884 1.238878682 1 9.784973023 -7.247608385 24.56860334 1.046933704 1.302612378 0.628874456 0.094576399 401.1115777 712512.9897 0.036004524 0.027733662 5.65E-08 7.247608385 0.255678674 (ac)MEITIRNS(ph)PYR ddPTM_A459_MK2206_30min_R1 2 MEITIRNSPYR 11 1 P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;A0A087X1I0;Q9UQ88-9;A0A087WYI9 P21127 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 MEIT(0.002)IRNS(0.998)PYR;MEIT(0.003)IRNS(0.997)PYR 79.23 0.002162 9303800 945.07 735.75 986.61 930.68 956.63 970.07 924.51 586.84 967.79 797.39 TRUE FALSE 864.6868337 687.8525413 919.6416621 1002.361135 918.5254014 1024.994525 862.8376248 581.7093198 1068.395234 896.1766932 0.964861997 0.767541208 1.026183418 1.118486056 1.024937837 1.143741556 0.962798554 0.649101147 1.192170296 1 9.807639397 -5.28491061 23.98870287 1.008975791 0.86620158 0.139786417 0.146784143 853.6145206 872433.4716 0.039222631 0.081741418 5.19E-06 5.28491061 -0.14277421 (ac)MERS(ph)PPQSPGPGK ddPTM_A459_MK2206_30min_R1 1 MERSPPQSPGPGK 13 1 Q86VQ6 Q86VQ6 TXNRD3 Thioredoxin reductase 3 1 MERS(1)PPQSPGPGK 72.496 0.0028678 4116600 2161.5 2101.4 2313.5 2104.4 2250.1 1993 1988.5 2332.6 1767.1 1595.3 TRUE FALSE 1977.653075 1964.598478 2156.466066 2266.481253 2160.473752 2105.841938 1855.850793 2312.206324 1950.796369 1792.937808 1.1030238 1.09574268 1.202755643 1.264115935 1.204990905 1.174520348 1.035089329 1.289618811 1.088044638 1 10.80810973 -7.048009783 24.99084157 1.124106194 1.177700769 0.123267594 0.085530737 1127.194417 586742.7519 0.033202939 0.025719491 8.95E-08 7.048009783 0.053594575 (ac)MES(ph)GAYGAAK ddPTM_A459_MK2206_30min_R2 2 MESGAYGAAK 10 0 K7ELD9;K7ENG9;O43760;O43760-2 K7ELD9 SYNGR2 Synaptogyrin-2 1 MES(0.992)GAY(0.008)GAAK;MES(0.988)GAY(0.012)GAAK 49.418 0.0031494 4419100 150519 79285 82919 79513 75837 75843 93514 59942 81326 88660 TRUE FALSE 162042.8504 75347.82219 85683.47807 73016.53355 72859.25833 78729.25851 81235.49947 67776.62521 88399.58848 85767.03146 1.889337285 0.878517315 0.99902581 0.851335674 0.849501925 0.917943144 0.94716464 0.790241006 1.030694277 1 16.38813557 -4.760289382 24.99994723 0.910890056 1.889338452 0.939784291 0.073720157 5.785056475 125707.5517 0.017178659 0.102866442 1.74E-05 4.760289382 0.978448396 (ac)MES(ph)PTKEIEEFESNSLK ddPTM_A459_MK2206_30min_R1 2 MESPTKEIEEFESNSLK 17 1 Q14123;Q14123-2;F8W905 Q14123 PDE1C "Calcium/calmodulin-dependent 3,5-cyclic nucleotide phosphodiesterase 1C" 1 MES(0.5)PT(0.5)KEIEEFESNSLK;MES(0.5)PT(0.5)KEIEEFESNSLK 92.247 1.36E-07 12304800 10787.4 13507 12675.2 11659.6 8894.5 8358.9 9347.6 10710.8 10735.3 10355.4 TRUE FALSE 9869.874983 12627.69184 11814.84274 12557.62441 8540.213231 8832.173694 8724.03866 10617.1566 11851.27285 11638.30513 0.848050886 1.085011237 1.01516867 1.078990821 0.733802142 0.758888308 0.749597004 0.912259688 1.01829886 1 13.50659336 -6.251228556 24.84644487 0.846964148 1.012988912 0.28222675 0.111281268 791.0680727 1924939.546 0.034139514 0.04355797 5.61E-07 6.251228556 0.166024764 (ac)MET(ph)MASPGKDNYR ddPTM_A459_MK2206_30min_R1 6 METMASPGKDNYR 13 1 S4R3E5;O60684 S4R3E5 KPNA6 Importin subunit alpha-7 1 MET(0.826)MAS(0.174)PGKDNYR;MET(0.999)MAS(0.001)PGKDNYR;MET(0.907)MAS(0.093)PGKDNYR;MET(0.986)MAS(0.014)PGKDNYR;MET(0.763)MAS(0.237)PGKDNYR;MET(1)MASPGKDNYR 114.86 0.00079522 49879100 22023.9 20901.2 22292.5 19358.1 17944 15150.6 18545.3 19139.5 19751.9 18531.8 TRUE FALSE 20150.65165 19540.52808 20779.34721 20849.06422 17229.25248 16008.41388 17308.17687 18972.16537 21805.18069 20827.65929 0.96749478 0.938200871 0.997680388 1.001027716 0.827229418 0.768613201 0.831018821 0.910912028 1.04693381 1 14.34621309 -6.249653659 24.9503882 0.883233293 0.974935183 0.178302122 0.079247665 1197.053308 2534163.48 0.025091314 0.032113581 5.63E-07 6.249653659 0.09170189 (ac)MET(ph)MASPGKDNYR ddPTM_A459_MK2206_30min_R2 5 METMASPGKDNYR 13 1 S4R3E5;O60684 S4R3E5 KPNA6 Importin subunit alpha-7 1 MET(0.983)MAS(0.017)PGKDNYR;MET(1)MASPGKDNYR;MET(1)MASPGKDNYR;MET(0.988)MAS(0.012)PGKDNYR;MET(0.625)MAS(0.375)PGKDNYR 136.49 0.00063324 113011000 290274 315001 280758 320136 341808 269723 377774 289845 274244 333859 TRUE FALSE 312497.6006 299358.5084 290118.3316 293979.8647 328386.9005 279987.4978 328171.82 327728.7367 298097.2474 322965.2082 0.967589055 0.926906369 0.898295929 0.910252427 1.016787233 0.866927739 1.016121278 1.014749355 0.923001115 1 18.30101923 -7.290319228 24.99886356 0.98969705 0.932387174 0.280416932 0.044955579 984.2512468 851979.7478 0.018424448 0.012424027 5.12E-08 7.290319228 -0.057309876 (ac)MET(ph)PGASASSLLLPAASRPPR ddPTM_A459_MK2206_30min_R1 1 METPGASASSLLLPAASRPPR 21 1 Q96DF8;F8WEF8 Q96DF8 DGCR14 Protein DGCR14 1 MET(0.999)PGAS(0.001)ASSLLLPAASRPPR 122.78 2.86E-08 6572400 367.7 244.77 216.35 230.55 301.33 174.69 157.01 407.41 255.21 184.17 TRUE FALSE 336.4251841 228.8354285 201.6647648 248.3070009 289.327388 184.5807968 146.5361494 403.8480573 281.7399928 206.98637 1.625349457 1.105557958 0.974290069 1.199629719 1.39780889 0.891753389 0.707950719 1.951085269 1.361152393 1 7.69339196 -7.757537327 24.99999936 1.492089056 1.126002392 0.153590671 0.324298617 155.9399762 999109.35 0.15740176 0.086498427 1.75E-08 7.757537327 -0.366086664 (ac)METMAS(ph)PGKDNYR ddPTM_A459_MK2206_30min_R1 1 METMASPGKDNYR 13 1 S4R3E5;O60684 S4R3E5 KPNA6 Importin subunit alpha-7 1 MET(0.135)MAS(0.865)PGKDNYR 77.279 0.010294 82888000 1156.6 1099.2 1222.6 1026.4 1102.4 943.11 1017.9 962.94 980.71 983.71 TRUE FALSE 1058.225096 1027.64188 1139.613318 1105.453506 1058.489074 996.5080732 949.9977483 954.5211171 1082.658314 1105.579421 0.957167867 0.929505253 1.030783765 0.999886109 0.957406635 0.901344629 0.859275896 0.863367297 0.979267788 1 10.11058695 -6.630913638 4.188649911 0.908456019 0.979388163 0.224860485 0.048982202 0.279380726 8.854782624 0.016897242 0.016848487 2.34E-07 6.630913638 0.070932144 (ac)METMAS(ph)PGKDNYR ddPTM_A459_MK2206_30min_R2 2 METMASPGKDNYR 13 1 S4R3E5;O60684 S4R3E5 KPNA6 Importin subunit alpha-7 1 MET(0.355)MAS(0.645)PGKDNYR;MET(0.005)MAS(0.995)PGKDNYR 107.53 0.00072148 64521900 119838 131108 119371 121245 127419 100016 133989 104102 105691 151171 TRUE FALSE 129012.8894 124597.3674 123350.7696 111338.8957 122415.8898 103822.179 116396.0834 117708.4888 114883.8121 146238.3027 0.882209976 0.852015957 0.843491529 0.761352489 0.837098678 0.709952024 0.795934316 0.804908746 0.785593173 1 17.15796171 -5.567241338 7.329506043 0.801273739 0.862478708 0.066264592 0.071762771 0.41078995 55.22943655 0.018114489 0.031731138 2.71E-06 5.567241338 0.061204969 (ac)MEVAEPS(ph)SPTEEEEEEEEHSAEPRPR ddPTM_A459_MK2206_30min_R1 2 MEVAEPSSPTEEEEEEEEHSAEPRPR 26 1 M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R3H9 M0QXG9 BABAM1 BRISC and BRCA1-A complex member 1 1 MEVAEPS(0.333)S(0.333)PT(0.333)EEEEEEEEHSAEPRPR;MEVAEPS(0.433)S(0.433)PT(0.134)EEEEEEEEHSAEPRPR 50.873 0.00016336 9289800 341.48 162.86 128.822 234.348 266.723 126.88 68.56 158.4 0 0 TRUE FALSE 312.4353328 152.2577844 120.0779216 252.3975236 256.0988581 134.063836 63.98648749 157.0151255 0 0 0 (ac)MEVAEPS(ph)SPTEEEEEEEEHSAEPRPR ddPTM_A459_MK2206_30min_R2 2 MEVAEPSSPTEEEEEEEEHSAEPRPR 26 1 M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R3H9 M0QXG9 BABAM1 BRISC and BRCA1-A complex member 1 1 MEVAEPS(0.447)S(0.447)PT(0.107)EEEEEEEEHSAEPRPR;MEVAEPS(0.333)S(0.333)PT(0.333)EEEEEEEEHSAEPRPR 82.362 3.46E-09 17943500 977.84 612.38 729.48 432.17 1195.35 0 911.77 0 1059.43 1028 TRUE FALSE 1052.704182 581.9700997 753.8004991 396.8603286 1148.414553 0 792.0535038 0 1151.577306 994.4564442 1.058572438 0.585214268 0.758002528 0.39907261 1.154816342 0 0.796468773 0 1.157996726 1 9.957764374 -4.759080759 24.28247799 0.614471037 1.05857325 0.080100567 0.399017801 102.1590742 1051404.658 0.090481624 0.587183797 1.74E-05 4.759080759 0.444102213 (ac)MEVKPPPGRPQPDS(ph)GR ddPTM_A459_MK2206_30min_R2 1 MEVKPPPGRPQPDSGR 16 2 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 MEVKPPPGRPQPDS(1)GR 56.774 0.0049784 6302500 35812 33601 36851 44961 38406 30033 36976 33121 28848 37509 TRUE FALSE 38553.79425 31932.4232 38079.59395 41287.54248 36897.98747 31175.92686 32121.00678 37450.02842 31357.14689 36285.0844 1.062524585 0.880042688 1.049455846 1.137865411 1.016891323 0.859194001 0.885239963 1.032105314 0.864188341 1 15.14708901 -6.632828076 8.308873005 0.92771833 1.029471968 0.292650386 0.078893749 0.349978251 24.43778266 0.026919716 0.026896563 2.33E-07 6.632828076 0.101753638 (ac)MEVS(ph)PLQPVNENMQVNK ddPTM_A459_MK2206_30min_R1 1 MEVSPLQPVNENMQVNK 17 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 MEVS(1)PLQPVNENMQVNK 118.9 0.00016898 18362000 1095.6 930.47 1079.1 792.66 986.52 1066.9 1080.3 866.58 1072.9 984.68 TRUE FALSE 1002.413467 869.8962339 1005.853699 853.7108105 947.2248194 1127.306956 1008.235158 859.0035824 1184.431794 1106.669592 0.905792907 0.786048736 0.908901542 0.771423392 0.855923779 1.018648171 0.911053457 0.776206004 1.070266864 1 10.11200884 -6.578326424 12.86637979 0.938401724 0.839927351 0.286921148 0.084480236 1.491353433 343.5914402 0.027073769 0.027073085 2.64E-07 6.578326424 -0.098474373 (ac)MEVS(ph)PLQPVNENMQVNK ddPTM_A459_MK2206_30min_R2 7 MEVSPLQPVNENMQVNK 17 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK 155.33 8.32E-07 28215500 60451.2 68837.4 59201.5 81577.1 57662.8 68378.2 82517.4 57677.8 50969.5 61077 TRUE FALSE 65079.39035 65419.03481 61175.24846 74911.98998 55398.66874 70980.38032 71682.76626 65216.4865 55402.73498 59084.06249 1.101471152 1.107219647 1.035393402 1.267888273 0.937624571 1.201345631 1.213233539 1.103791509 0.937693392 1 15.85048141 -8.203454702 6.032472896 0.969278542 1.122906199 0.316557677 0.089552169 0.230404471 17.92427229 0.061515022 0.022204654 6.26E-09 8.203454702 0.153627657 (ac)MFPTGFS(ph)SPSPSAAAAAQEVR ddPTM_A459_MK2206_30min_R2 1 MFPTGFSSPSPSAAAAAQEVR 21 0 A0A669KAX4;Q13620-1;A0A669KAU9 A0A669KAX4 CUL4B Cullin-4B 1 MFPT(0.008)GFS(0.863)S(0.126)PS(0.002)PS(0.001)AAAAAQEVR 113.86 8.21E-05 2617000 0 1485.2 0 1024.2 1310.8 0 1163.5 939.72 1730 1911.1 TRUE FALSE 0 1411.447128 0 940.5195837 1259.331406 0 1010.731052 1062.544631 1880.472273 1848.740964 0 0.763463977 0 0.508735189 0.681183265 0 0.546713181 0.574739594 1.01716374 1 10.85232738 -8.072841242 1.874470277 1.03152963 0.357409126 0.485880824 0.266042542 0.299543785 1.879591485 0.222912234 0.071034199 8.46E-09 8.072841242 -0.674120504 (ac)MFPTGFSS(ph)PSPSAAAAAQEVR ddPTM_A459_MK2206_30min_R2 1 MFPTGFSSPSPSAAAAAQEVR 21 0 A0A669KAX4;Q13620-1;A0A669KAU9 A0A669KAX4 CUL4B Cullin-4B 1 MFPT(0.002)GFS(0.266)S(0.666)PS(0.05)PS(0.015)AAAAAQEVR 91.64 0.0097513 0 700.03 0 0 1078 1105.3 905.22 503.31 0 1012.2 1055.4 TRUE FALSE 753.624835 0 0 989.9239516 1061.900368 939.6687814 437.2247924 0 1100.239326 1020.962384 0.738151421 0 0 0.969598848 1.040097446 0.920375516 0.4282477 0 1.077649229 1 9.995713998 -5.760712355 24.99968922 0.737359458 0.221445412 0.297161027 0.369887589 26.49218166 910896.0964 0.108318958 0.174281692 1.73E-06 5.760712355 -0.515914046 (ac)MHRDS(ph)CPLDCK ddPTM_A459_MK2206_30min_R2 2 MHRDSCPLDCK 11 1 A0A087X2D0;P84103-2;P84103 A0A087X2D0 SRSF3 Serine/arginine-rich splicing factor 3 1 MHRDS(1)CPLDCK;MHRDS(1)CPLDCK 67.234 0.018605 34930000 334670 458600 431710 442800 455100 365880 453440 388930 395980 424700 TRUE FALSE 360292.5925 435826.5909 446102.9959 406621.8236 437230.4873 379803.8198 393902.7833 439764.4864 430421.6246 410842.0738 0.876961284 1.060812947 1.085825976 0.989727804 1.064230066 0.924452105 0.958769339 1.070397884 1.047657122 1 18.64822441 -4.751829616 24.92382192 1.021844465 0.876960984 0.428422153 0.050403229 391.1552118 1014423.817 0.013267203 0.166739653 1.77E-05 4.751829616 -0.144883481 (ac)MIPLEKPGS(ph)GGSSPGATSGSGR ddPTM_A459_MK2206_30min_R1 1 MIPLEKPGSGGSSPGATSGSGR 22 1 Q9UEE5 Q9UEE5 STK17A Serine/threonine-protein kinase 17A 1 MIPLEKPGS(0.462)GGS(0.333)S(0.106)PGAT(0.075)S(0.018)GS(0.006)GR 61.276 0.0017068 3092900 428.27 352.17 407.79 464.86 379.33 443.44 509.91 487.78 305.76 211.26 TRUE FALSE 391.8433876 329.243669 380.110351 500.6635977 364.2204829 468.5471896 475.8948343 483.5153909 337.5448462 237.4324837 1.650336051 1.386683338 1.600919744 2.108656701 1.533996011 1.973391266 2.004337514 2.036433193 1.421645602 1 7.891373517 -5.535952426 24.86707943 1.788196761 1.512332557 0.038955242 0.331721921 428.4266997 814895.3546 0.084685639 0.146789756 2.91E-06 5.535952426 -0.275864204 (ac)MKDS(ph)PFQVTKLY(ph)WLNEK ddPTM_A459_MK2206_30min_R1 1 MKDSPFQVTKLYWLNEK 17 2 B4DXM2;Q9UF33-2;Q9UF33-3 B4DXM2 EPHA6 Ephrin type-A receptor 6 2 MKDS(0.999)PFQVT(0.243)KLY(0.759)WLNEK 43.914 0.023739 3720400 1110.6 1642.3 1464.8 1261.3 775.47 738.77 926.7 868.65 1440.5 962.99 TRUE FALSE 1016.137638 1535.385971 1365.373457 1358.445545 744.5813878 780.598519 864.8815339 861.0554846 1590.24513 1082.292471 0.938875272 1.418642384 1.261556828 1.255155682 0.687966892 0.721245449 0.799119976 0.795584842 1.469330308 1 10.0798747 -6.240911889 24.06063553 0.886784635 1.235920763 0.283006937 0.23616982 605.4710503 709682.392 0.070244124 0.090559143 5.74E-07 6.240911889 0.349136128 (ac)MLKVHPLK ddPTM_A459_MK2206_30min_R2 1 MLKVHPLK 8 1 P26012-2 P26012-2 0 54.408 0.028152 0 672.1 2498.9 1120.5 2092.2 1206.6 904.81 2038.8 510.25 2128.9 1001.9 FALSE TRUE 723.5564928 2374.80826 1157.856911 1921.260567 1159.222821 939.2431786 1771.103111 576.941427 2314.067874 969.2080851 0.746544012 2.450256345 1.194642233 1.982299361 1.196051539 0.969083103 1.827371375 0.59527096 2.387586226 1 9.920662629 -6.296533582 24.75094788 1.315890745 1.62615207 0.039635318 0.626878016 1725.242613 1216760.064 0.179799915 0.203882335 5.05E-07 6.296533582 0.310261325 (ac)MLTDSGGGGTS(ph)FEEDLDSVAPR ddPTM_A459_MK2206_30min_R1 1 MLTDSGGGGTSFEEDLDSVAPR 22 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;E9PDP5;D6RHC4;Q8IWZ3-5;Q8IWZ3-3;Q8IWZ3-2 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 MLT(0.251)DS(0.197)GGGGT(0.194)S(0.357)FEEDLDSVAPR 85.231 3.59E-05 792010 0 0 0 0 0 0 0 0 74.554 0 TRUE FALSE 0 0 0 0 0 0 0 0 82.30415509 0 0 (ac)MMEGLDDGPDFLSEEDR ddPTM_A459_MK2206_30min_R1 2 MMEGLDDGPDFLSEEDR 17 0 G3V5X9;Q9UNH7;G3V2U1;H0YJF8;G3V4Z5 G3V5X9 SNX6 "Sorting nexin-6;Sorting nexin-6, N-terminally processed" 0 ; 177.81 3.21E-51 0 0 0 197.75 0 0 0 172.39 0 0 0 FALSE TRUE 0 0 184.327281 0 0 0 160.8901776 0 0 0 0 (ac)MNLLPNIES(ph)PVTR ddPTM_A459_MK2206_30min_R1 5 MNLLPNIESPVTR 13 0 E9PM69;P17980 E9PM69 PSMC3 26S protease regulatory subunit 6A 1 MNLLPNIES(0.959)PVT(0.041)R;MNLLPNIES(0.954)PVT(0.046)R;MNLLPNIES(1)PVTR;MNLLPNIES(0.966)PVT(0.034)R;MNLLPNIES(0.711)PVT(0.289)R 155.09 0.00032593 51392400 636.95 759.744 737.731 826.58 857.917 629.29 852.091 625.46 761.13 669.84 TRUE FALSE 582.7740577 710.2845275 687.6558752 890.2433348 823.7443492 664.919856 795.2495641 619.9916692 840.2521872 752.8248362 0.774116408 0.943492421 0.913434098 1.182537148 1.094204534 0.883233156 1.056354049 0.823553686 1.116132395 1 9.556170414 -4.70982663 1.588811683 1.009805324 0.662373974 0.320679185 0.104515557 1.581178113 3.364796803 0.029462886 0.904986585 1.95E-05 4.70982663 -0.34743135 (ac)MNLLPNIES(ph)PVTR ddPTM_A459_MK2206_30min_R2 2 MNLLPNIESPVTR 13 0 E9PM69;P17980 E9PM69 PSMC3 26S protease regulatory subunit 6A 1 MNLLPNIES(0.956)PVT(0.044)R;MNLLPNIES(0.998)PVT(0.002)R 153 0.00032536 23743000 0 0 1368.1 0 0 1368.4 0 0 0 0 TRUE FALSE 0 0 1413.711771 0 0 1420.475421 0 0 0 0 0 (ac)MNSGTS(ph)LTMAPQSLPSS(ph)R ddPTM_A459_MK2206_30min_R2 1 MNSGTSLTMAPQSLPSSR 18 0 D6REA1 D6REA1 SIL1 2 MNS(0.043)GT(0.461)S(0.478)LT(0.02)MAPQS(0.076)LPS(0.438)S(0.484)R 50.426 0.040659 16522000 88804 81010 85550 73716 76127 63539 82662 68688 60501 88709 TRUE FALSE 95602.90252 76987.1612 88402.1943 67693.16699 73137.87147 65957.02117 71808.38011 77665.75744 65763.26762 85814.43259 1.114065544 0.897135352 1.03015532 0.788831959 0.852279381 0.768600563 0.836786749 0.905043069 0.766342742 1 16.38893269 -5.756896311 24.99966137 0.838181794 1.002120431 0.464896672 0.082239656 97.28655133 535340.8778 0.021048715 0.034945954 1.75E-06 5.756896311 0.163938637 (ac)MNTAPS(ph)RPSPTR ddPTM_A459_MK2206_30min_R1 1 MNTAPSRPSPTR 12 1 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 MNT(0.001)APS(0.568)RPS(0.329)PT(0.102)R 62.732 0.013222 1833000 1010.2 874.84 978.33 969.41 1139.4 957.91 847.29 1062.3 435.06 403.99 TRUE FALSE 924.2771852 817.887757 911.9236854 1044.074126 1094.015285 1012.146036 790.7688301 1053.012423 480.2860439 454.0393312 2.035676475 1.801358827 2.00846848 2.299523531 2.409516555 2.229203434 1.741630682 2.319209705 1.057807135 1 8.826673466 -8.269669227 24.79975502 1.02890325 2.100782155 0.811037255 0.207868529 260.8471911 786023.7018 0.201017582 0.055510732 5.37E-09 8.269669227 1.071878905 (ac)MNTAPSRPS(ph)PTR ddPTM_A459_MK2206_30min_R1 8 MNTAPSRPSPTR 12 1 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 MNTAPS(0.006)RPS(0.857)PT(0.137)R;MNTAPS(0.028)RPS(0.829)PT(0.142)R;MNTAPS(0.321)RPS(0.514)PT(0.165)R;MNTAPS(0.059)RPS(0.735)PT(0.206)R;MNTAPS(0.272)RPS(0.618)PT(0.109)R;MNTAPS(0.07)RPS(0.708)PT(0.222)R;MNT(0.002)APS(0.095)RPS(0.698)PT(0.205)R;MNTAPS(0.07)RPS(0.708)PT(0.222)R 91.307 0.0010844 782242300 3205.18 4052.59 2904.15 3383.29 3624.66 2984.81 3243.45 3353.2 2398.58 2932.06 TRUE FALSE 2932.56261 3788.765654 2707.024389 3643.871582 3480.282117 3153.807363 3027.085369 3323.883326 2647.920974 3295.305729 0.889921255 1.149746326 0.82147898 1.105776484 1.056133301 0.957060626 0.918605319 1.008672214 0.803543341 1 11.68619661 -8.209771067 24.99804628 0.901770686 0.991032838 0.100050259 0.103718292 649.2737032 314130.8146 0.065763227 0.024856074 6.17E-09 8.209771067 0.089262153 (ac)MNTAPSRPS(ph)PTR ddPTM_A459_MK2206_30min_R2 7 MNTAPSRPSPTR 12 1 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 MNTAPSRPS(0.758)PT(0.242)R;MNTAPS(0.144)RPS(0.723)PT(0.133)R;MNTAPS(0.086)RPS(0.768)PT(0.146)R;MNTAPS(0.098)RPS(0.771)PT(0.131)R;MNTAPS(0.035)RPS(0.749)PT(0.217)R;MNTAPS(0.009)RPS(0.867)PT(0.124)R;MNTAPS(0.02)RPS(0.757)PT(0.223)R 86.738 0.0022523 874437300 193749.4 204094.6 211766.1 234564.8 224158.1 243753.3 223974 179319.6 174655 191517.5 TRUE FALSE 208583.003 193959.5589 218826.2761 215400.1055 215356.5267 253029.5026 194565.9448 202757.2874 189846.1762 185268.2997 1.125842918 1.046911745 1.181131777 1.162638756 1.162403536 1.365746342 1.05018476 1.094398166 1.024709443 1 17.49925652 -7.429424465 21.94243699 1.050014406 1.170960871 0.405316951 0.077925369 22.69958606 5325.84787 0.034188805 0.023050037 3.72E-08 7.429424465 0.120946465 (ac)MNVDHEVNLLVEEIHR ddPTM_A459_MK2206_30min_R1 1 MNVDHEVNLLVEEIHR 16 0 Q5SZC9;Q9P1F3 Q5SZC9 ABRACL Costars family protein ABRACL 0 54.004 0.032112 0 131.95 168.46 144.96 198.23 162.38 127.59 202.88 65.593 145.29 169.69 FALSE TRUE 120.7269596 157.4932234 135.1205191 213.4977089 155.9120608 134.8140355 189.3462454 65.01952732 160.3934154 190.7124783 0.633031256 0.82581499 0.708503818 1.119474252 0.817524171 0.706896773 0.992836164 0.340929591 0.841022134 1 7.575255432 (ac)MNY(ph)EGSPIKVTLATLK ddPTM_A459_MK2206_30min_R1 2 MNYEGSPIKVTLATLK 16 1 E5RI98 E5RI98 NPM1 1 MNY(0.976)EGS(0.024)PIKVTLATLK;MNY(0.859)EGS(0.14)PIKVT(0.001)LATLK 94.191 3.27E-05 56838000 7072.4 6720.5 7232.4 5825.4 5867.8 5543.6 5243.6 5975.4 5252.6 4181.4 TRUE FALSE 6470.855241 6282.994228 6741.484839 6274.073317 5634.073101 5857.473841 4893.809011 5923.157708 5798.626567 4699.4234 1.376946636 1.336971303 1.434534466 1.335073004 1.198886038 1.246423942 1.041363715 1.260400948 1.233901709 1 12.19826804 -6.294385268 1.999934783 1.165139717 1.381508488 0.609674726 0.082379714 0.238503993 1.874355614 0.027987157 0.035566093 5.08E-07 6.294385268 0.216368771 (ac)MPEARS(ph)SGPDLT(ph)RWRK ddPTM_A459_MK2206_30min_R1 1 MPEARSSGPDLTRWRK 16 3 A2A393;Q6ZQR2-2;Q6ZQR2 A2A393 C9orf171 Uncharacterized protein C9orf171 2 MPEARS(0.978)S(0.028)GPDLT(0.994)RWRK 57.174 0.043088 0 491.38 459.8 509.35 338.2 483.13 336.53 405.01 379.7 461.54 236.1 TRUE FALSE 449.5855507 429.8669364 474.7767411 364.2482226 463.8859091 355.5840378 377.9925219 376.3803229 509.5187346 265.3498505 1.694312433 1.620000673 1.789248196 1.372709357 1.748204901 1.340057427 1.424506256 1.418430507 1.920177207 1 8.051751926 -11.54989444 2.857260771 0.307901701 1.579297005 0.470396258 0.188001668 52140932.88 47321796.42 235395492.2 0.047390512 2.82E-12 11.54989444 1.271395304 (ac)MPGSEDLRK ddPTM_A459_MK2206_30min_R1 1 MPGSEDLRK 9 1 A6NFQ7 A6NFQ7 DPRX Divergent paired-related homeobox 0 56.721 0.033696 91977000 9929.1 9619.1 10502 9875.2 11256 8113.4 8060.5 8939 7127.6 5319.6 FALSE TRUE 9084.577905 8992.894842 9789.1535 10635.78962 10807.64969 8572.773697 7522.798752 8860.847265 7868.539526 5978.632209 1.519507738 1.504172615 1.637356699 1.778967035 1.807712752 1.43390217 1.258280906 1.482086028 1.316110316 1 12.54559975 -8.27920555 0.571108078 1.012154392 1.637863627 0.666985952 0.133083827 0.55114702 0.435649413 0.155667448 0.075828519 5.26E-09 8.27920555 0.625709235 (ac)MQIIRHS(ph)EQTLK ddPTM_A459_MK2206_30min_R1 1 MQIIRHSEQTLK 12 1 J3KSH1;J3KS38;J3KRS2;J3QLK6;J3KRD0;Q86W34-5;Q86W34 J3KSH1 AMZ2 Archaemetzincin-2 1 MQIIRHS(0.816)EQT(0.184)LK 42.243 0.02581 3700200 1169.2 1186.8 1124.8 1031.1 1227.7 903.24 1204.2 893.87 1144.6 981.47 TRUE FALSE 1069.7534 1109.539104 1048.45171 1110.515501 1178.798109 954.3806682 1123.870015 886.0549888 1263.585266 1103.061913 0.969803587 1.00587201 0.950492168 1.006757179 1.068659968 0.865210426 1.018863947 0.803268591 1.145525243 1 10.10729805 -6.740536662 24.99972238 0.957545984 0.998215291 0.028834252 0.090224494 857.347362 1025388.289 0.027813639 0.027784793 1.82E-07 6.740536662 0.040669306 (ac)MQT(ph)PVNIPVPVLR ddPTM_A459_MK2206_30min_R1 3 MQTPVNIPVPVLR 13 0 Q9H840 Q9H840 GEMIN7 Gem-associated protein 7 1 MQT(1)PVNIPVPVLR;MQT(1)PVNIPVPVLR;MQT(1)PVNIPVPVLR 114.87 0.0043619 7304900 1385.74 1331.19 1132.32 1173.81 1372.46 1415.61 1421.9 1216.31 1059.39 1271.12 TRUE FALSE 1267.875536 1244.529289 1055.461273 1264.21705 1317.792012 1495.760615 1327.047645 1205.67593 1169.517382 1428.595942 0.887497646 0.871155554 0.738810214 0.88493675 0.92243858 1.047014464 0.928917412 0.843958669 0.81864812 1 10.48038221 -5.994432746 24.93345577 0.923190808 0.83227439 0.256067519 0.071950761 225.7048852 1010823.488 0.021844801 0.03229089 1.01E-06 5.994432746 -0.090916418 (ac)MS(ph)GDEMIFDPTMSK ddPTM_A459_MK2206_30min_R1 4 MSGDEMIFDPTMSK 14 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 MS(0.999)GDEMIFDPT(0.001)MSK;MS(1)GDEMIFDPTMSK;MS(1)GDEMIFDPTMSK;MS(1)GDEMIFDPTMSK 93.258 0.00049953 8933700 10677 10400.7 12655.5 10589.3 13151.8 11688.7 11629.8 11904.2 9606.3 9697 TRUE FALSE 9768.865083 9723.61254 11796.47992 11404.88972 12627.93596 12350.50409 10853.99726 11800.12283 10604.90926 10898.33757 0.896362865 0.892210622 1.08241095 1.046479763 1.158702956 1.133246609 0.995931461 1.082745213 0.973075865 1 13.41182046 -5.258385391 24.64613622 1.06553159 0.894286718 0.574703742 0.056485106 143.6245303 1159053.03 0.014846483 0.035862525 5.52E-06 5.258385391 -0.171244872 (ac)MS(ph)PTPPLFSLPEAR ddPTM_A459_MK2206_30min_R1 3 MSPTPPLFSLPEAR 14 0 A0A087WWS1;Q96FV9;J3KRD7;J3QQZ3;J3KT14;Q96FV9-2 A0A087WWS1 THOC1 THO complex subunit 1 1 MS(0.996)PT(0.004)PPLFSLPEAR;MS(0.991)PT(0.009)PPLFSLPEAR;MS(0.989)PT(0.011)PPLFSLPEAR 132.31 0.00025447 13868400 1146.14 1081.221 1110.357 818.61 1237.02 1099.85 1080.8 1383.14 903.19 901.33 TRUE FALSE 1048.654774 1010.833316 1034.98906 881.659484 1187.746874 1162.122557 1008.701804 1371.047353 997.0798326 1012.993565 1.035203787 0.997867461 1.021713361 0.870350528 1.172511766 1.147216129 0.995763289 1.353461068 0.984290391 1 9.984409294 -6.279487213 24.8633186 1.122808423 0.985356148 0.233998887 0.111295057 1018.547494 1403182.842 0.032802769 0.037273521 5.25E-07 6.279487213 -0.137452275 (ac)MS(ph)S(ph)ES(ph)SKK ddPTM_A459_MK2206_30min_R1 2 MSSESSKK 8 1 F8WES8;C9JXU6;F5GZF3;C9JCL9;C9JXG5;F8WCP5;Q13769 F8WES8 THOC5 THO complex subunit 5 homolog 3 MS(1)S(1)ES(0.5)S(0.5)KK;MS(1)S(1)ES(0.5)S(0.5)KK 57.281 0.022858 3773600 1771.32 1100.74 1320.48 1035.34 1306.53 1171.52 1685.03 1598.09 1194.04 1165.56 TRUE FALSE 1620.659932 1029.081626 1230.849497 1115.082066 1254.488143 1237.85045 1572.624723 1584.118068 1318.164731 1309.958372 1.2371843 0.785583456 0.939609626 0.851234734 0.957654968 0.944954035 1.200515037 1.209288861 1.006264595 1 10.35530525 -7.242363484 22.79504168 1.12145784 0.940124771 0.245358671 0.12741489 305.9841659 365640.6322 0.046876305 0.036224281 5.72E-08 7.242363484 -0.181333069 (ac)MS(ph)SYFVNPLFS(ph)K ddPTM_A459_MK2206_30min_R2 1 MSSYFVNPLFSK 12 0 P31273 P31273 HOXC8 Homeobox protein Hox-C8 2 MS(0.914)S(0.066)Y(0.021)FVNPLFS(0.999)K 54.237 0.031237 6939300 13938 16865 14340 15624 13982 15028 14204 17356 14574 11133 TRUE FALSE 15005.104 16027.50862 14818.08844 14347.46922 13432.99643 15599.90107 12338.99774 19624.48879 15841.62018 10769.73112 1.393266352 1.488199514 1.375901429 1.332203103 1.247291717 1.448494943 1.145710844 1.822189298 1.470939246 1 13.39469461 (ac)MT(ph)MKT(ph)K ddPTM_A459_MK2206_30min_R1 1 MTMKTK 6 1 E7EUR8;P78312-4 E7EUR8 FAM193A Protein FAM193A 2 MT(1)MKT(1)K 49.418 0.033532 5020400 1150.3 1580.4 1558.9 1136.5 1468.3 1147 1590.3 1307.5 1468.3 1195.1 TRUE FALSE 1052.460945 1477.515673 1453.086211 1224.033427 1409.814502 1211.942149 1484.213989 1296.068665 1620.935039 1343.158011 0.783571952 1.100031166 1.081843089 0.911310075 1.049626694 0.902307948 1.105018156 0.964941321 1.206808899 1 10.39141332 -7.281005379 24.74601453 1.066270536 0.983131073 0.160747835 0.107358115 1613.165865 2040234.792 0.043080188 0.029094229 5.24E-08 7.281005379 -0.083139462 (ac)MT(ph)TSQK ddPTM_A459_MK2206_30min_R2 1 MTTSQK 6 0 O75531;E9PJJ8;Q9ULM3 O75531;Q9ULM3 BANF1;YEATS2 "Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed;YEATS domain-containing protein 2" 1 MT(0.619)T(0.066)S(0.314)QK 94.262 0.0091275 27906000 255750 246610 213250 256120 233610 178610 322350 257090 168600 253760 TRUE FALSE 275330.4166 234363.706 220359.6486 235194.1767 224437.2976 185407.1287 280025.0578 290692.5457 183264.5232 245479.832 1.121600966 0.954716744 0.897669054 0.958099795 0.914279987 0.755284567 1.140725311 1.184180971 0.746556333 1 17.90524498 -9.48465898 12.09464685 1.000007403 0.965420518 0.005698148 0.142271805 0 0 0.13827954 0.033537715 3.28E-10 9.48465898 -0.034586885 (ac)PCSEETPAIS(ph)PSKR ddPTM_A459_MK2206_30min_R2 1 PCSEETPAISPSKR 14 1 P33316-2;H0YNJ9 P33316-2 DUT "Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial" 1 PCSEETPAIS(0.835)PS(0.164)KR 70.272 0.0031533 3991100 10363 19076 11966 14378 8363.6 8342.2 14050 11109 10914 10763 TRUE FALSE 11156.39925 18128.71358 12364.94047 13203.27141 8035.20304 8659.668267 12205.21812 12560.98444 11863.27999 10411.80419 1.071514508 1.741169277 1.187588648 1.268106004 0.771739738 0.831716397 1.172248142 1.206417659 1.139406752 1 13.34593246 -5.81750185 2.400546809 1.032372852 1.397554623 0.308153863 0.210500406 0.333154333 3.913155822 0.064145952 0.113195109 1.52E-06 5.81750185 0.365181771 (ac)PEGAQGLSLS(ph)K ddPTM_A459_MK2206_30min_R2 1 PEGAQGLSLSK 11 0 Q9H7P9;Q9H7P9-3;E7ESZ3;Q9H7P9-2;C9J7S4;C9JVL3;M0R391 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 PEGAQGLS(0.001)LS(0.999)K 87.476 0.015191 380200 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)QTEKS(ph)DEVS(ph)RK ddPTM_A459_MK2206_30min_R2 1 QTEKSDEVSRK 11 2 H0Y755 H0Y755 FCGR3A 2 QTEKS(1)DEVS(1)RK 66.708 0.04435 13618000 17365 35981 25001 32889 31044 28169 25268 17466 39604 23330 TRUE FALSE 18694.47775 34194.23586 25834.52086 30201.86349 29825.05658 29240.99103 21950.28125 19748.86617 43048.68433 22568.74401 0.828334875 1.515114702 1.144703527 1.338216406 1.321520443 1.295641043 0.972596492 0.875053843 1.907447057 1 14.46203851 (ac)S(ph)AADEVDGLGVARPHYGSVLDNER ddPTM_A459_MK2206_30min_R1 2 SAADEVDGLGVARPHYGSVLDNER 24 1 P46940;A0A0J9YXZ5;H0YLE8 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 S(1)AADEVDGLGVARPHYGSVLDNER;S(1)AADEVDGLGVARPHYGSVLDNER 90.017 5.60E-06 21501000 0 0 139.89 0 219.31 201.624 0 264.75 179.892 121.21 TRUE FALSE 0 0 130.3946566 0 210.5744183 213.0397766 0 262.4353187 198.5924171 136.2264099 0 0 0.957190729 0 1.54576795 1.563865456 0 1.926464324 1.457811428 1 7.089862612 -5.834978444 0.953233619 1.255165888 4.75E-15 0.381047507 0.580568988 0.738665027 1.290024462 0.243522706 0.677895736 1.46E-06 5.834978444 -1.255165888 (ac)S(ph)AADEVDGLGVARPHYGSVLDNER ddPTM_A459_MK2206_30min_R2 2 SAADEVDGLGVARPHYGSVLDNER 24 1 P46940;A0A0J9YXZ5;H0YLE8 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 S(1)AADEVDGLGVARPHYGSVLDNER;S(1)AADEVDGLGVARPHYGSVLDNER 90.896 5.27E-07 9479400 1005.3 836.68 714.72 1926.03 1643.83 1750.03 2078.3 0 1089.7 1287.5 TRUE FALSE 1082.266541 795.1316878 738.5484081 1768.667188 1579.284975 1816.628618 1805.416714 0 1184.480136 1245.48898 0.86894911 0.638409252 0.592978677 1.42005848 1.268003972 1.458566592 1.449564582 0 0.951016151 1 10.28249654 -7.741603203 24.99884329 0.60663033 1.094907952 0.212700896 0.393247825 355.3249853 447804.6861 0.197608992 0.11389196 1.81E-08 7.741603203 0.488277623 (ac)S(ph)AIQNLHSFDPFADASK ddPTM_A459_MK2206_30min_R2 2 SAIQNLHSFDPFADASK 17 0 K7EM18;P41567 K7EM18 EIF1 Eukaryotic translation initiation factor 1 1 S(1)AIQNLHSFDPFADASK;S(1)AIQNLHSFDPFADASK 79.089 0.0013571 2295400 46025 34230.6 37196.7 39948 36192.4 36863.3 46594 35774.2 31465.3 45485 TRUE FALSE 49548.70939 32530.75818 38436.81941 36684.12061 34771.30452 38266.15871 40476.15183 40450.01077 34202.09492 44000.82818 1.126085836 0.739321498 0.873547636 0.833714322 0.790242047 0.869669056 0.919895227 0.919301123 0.777305708 1 15.42524306 -7.019299478 22.84216076 0.897026562 0.859761452 0.012195723 0.108208901 1240.209125 1467861.564 0.039129754 0.030878048 9.57E-08 7.019299478 -0.03726511 (ac)S(ph)ASAPAAEGEGTPTQPASEKEPEMPGPR ddPTM_A459_MK2206_30min_R2 1 SASAPAAEGEGTPTQPASEKEPEMPGPR 28 1 D6R9L5;H0Y8X0;A0A494C198;B4DFG0;H0Y993;P35659;P35659-2 D6R9L5 DEK Protein DEK 1 S(0.427)AS(0.427)APAAEGEGT(0.135)PT(0.011)QPAS(0.001)EKEPEMPGPR 47.331 2.31E-10 20987000 34638 37391 34851 46974 39170 33806 44822 40254 28044 42258 TRUE FALSE 37289.91191 35534.21731 36012.91495 43136.07394 37631.98899 35092.51102 38936.81756 45515.33601 30483.21643 40879.12492 0.912199368 0.869250929 0.880961004 1.055210307 0.920567382 0.858445749 0.952486572 1.113412679 0.745691511 1 15.31907669 (ac)S(ph)ASSLLEQRPK ddPTM_A459_MK2206_30min_R1 1 SASSLLEQRPK 11 1 Q9Y5A9;S4R3J8;S4R3V3 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 1 S(0.962)AS(0.037)S(0.001)LLEQRPK 94.309 0.0073023 3958100 1798.4 1588.2 1679.5 1616.5 1751.2 1486.1 1910.6 2061.8 1189.8 1358.5 TRUE FALSE 1645.436636 1484.807891 1565.500219 1741.00311 1681.445996 1570.241698 1783.14736 2043.7739 1313.483968 1526.801236 1.077701928 0.972495867 1.025346445 1.140294538 1.101286766 1.028451943 1.167897509 1.338598536 0.860284847 1 10.57629654 -5.715527709 9.779969405 1.106087085 1.019657965 0.049407058 0.11933138 0.979844973 199.4764388 0.031544466 0.054516613 1.93E-06 5.715527709 -0.08642912 (ac)S(ph)DAAVDTSSEITTK ddPTM_A459_MK2206_30min_R1 4 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 1 S(1)DAAVDTSSEITTK;S(1)DAAVDTSSEITTK;S(1)DAAVDTSSEITTK;S(0.999)DAAVDTSSEITTK 152.7 4.79E-06 184391000 18210.3 17532.8 18622.9 16369 19507.1 16796.3 18115.3 17894.2 15615.8 13832.1 TRUE FALSE 16661.41836 16391.41153 17358.82943 17629.74322 18730.0909 17747.29199 16906.86139 17737.7529 17239.11829 15545.72498 1.071768501 1.054399943 1.116630422 1.134057321 1.204838689 1.141618806 1.08755696 1.141005191 1.108929839 1 13.92423028 -5.329404029 4.826338233 1.126028688 1.063036552 0.139765479 0.049585847 0.311243484 14.06532579 0.012764283 0.028290038 4.68E-06 5.329404029 -0.062992136 (ac)S(ph)DAAVDTSSEITTK ddPTM_A459_MK2206_30min_R2 4 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 1 S(1)DAAVDTSSEITTK;S(1)DAAVDTSSEITTK;S(1)DAAVDTSSEITTK;S(1)DAAVDTSSEITTK 136.02 6.28E-05 260931000 354722 428275 403671 464930 419195 385662 465699 369587 375750 402251 TRUE FALSE 381879.7891 407007.4863 417129.1897 426943.7318 402735.298 400338.6377 404552.1619 417893.2899 408432.0558 389125.5828 0.981379292 1.045954068 1.071965474 1.097187516 1.034975123 1.028816031 1.039644217 1.073929108 1.049615018 1 18.56987631 -4.766875589 4.769038072 1.052646948 0.976548339 0.379390221 0.025772909 0.186353578 10.28033885 0.006518261 0.047781203 1.71E-05 4.766875589 -0.076098609 (ac)S(ph)DEFSLADALPEHSPAK ddPTM_A459_MK2206_30min_R1 5 SDEFSLADALPEHSPAK 17 0 Q8NDC0 Q8NDC0 MAPK1IP1L MAPK-interacting and spindle-stabilizing protein-like 1 S(0.5)DEFS(0.5)LADALPEHSPAK;S(0.958)DEFS(0.028)LADALPEHS(0.014)PAK;S(0.991)DEFS(0.009)LADALPEHSPAK;S(0.972)DEFS(0.027)LADALPEHS(0.001)PAK;S(0.994)DEFS(0.006)LADALPEHSPAK 131.12 9.08E-78 127555800 9261.37 9709.14 8692.65 7663.07 7446.02 6674.57 7246.4 7166.78 7662.98 6767.56 TRUE FALSE 8473.641848 9077.073221 8102.617137 8253.280979 7149.429256 7052.478385 6763.005878 7104.121598 8459.574193 7605.976425 1.114076796 1.193413273 1.065296115 1.085104728 0.939975206 0.927228536 0.889169976 0.934018356 1.112227243 1 12.89291775 -5.967853574 1.803368269 0.95790959 1.14201657 0.556822264 0.064293321 0.250641134 1.647196407 0.021489498 0.036199943 1.08E-06 5.967853574 0.18410698 (ac)S(ph)DEFSLADALPEHSPAK ddPTM_A459_MK2206_30min_R2 8 SDEFSLADALPEHSPAK 17 0 Q8NDC0 Q8NDC0 MAPK1IP1L MAPK-interacting and spindle-stabilizing protein-like 1 S(0.983)DEFS(0.016)LADALPEHS(0.001)PAK;S(0.524)DEFS(0.081)LADALPEHS(0.395)PAK;S(0.907)DEFS(0.052)LADALPEHS(0.041)PAK;S(0.793)DEFS(0.193)LADALPEHS(0.014)PAK;S(0.943)DEFS(0.046)LADALPEHS(0.011)PAK;S(0.5)DEFS(0.5)LADALPEHSPAK;S(0.977)DEFS(0.023)LADALPEHSPAK;S(0.965)DEFS(0.035)LADALPEHSPAK 155.33 5.77E-38 132990700 367366.7 350568.3 333210.3 343403.3 366664.2 286488.8 437599.6 321323 314128 407275.1 TRUE FALSE 395492.577 333159.588 344319.3651 315346.1519 352267.1212 297391.332 380142.2469 363321.0194 341450.2856 393985.7468 1.00382458 0.845613301 0.873938633 0.800399899 0.894111333 0.754827641 0.964862942 0.922167927 0.866656442 1 18.58778391 -10.59256641 5.663116717 1.00000066 0.877503817 0.209406817 0.069282814 5.68E-07 9.32E-08 0.06593016 0.015990326 2.56E-11 10.59256641 -0.122496843 (ac)S(ph)DKPDMAEIEK ddPTM_A459_MK2206_30min_R1 1 SDKPDMAEIEK 11 1 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 S(1)DKPDMAEIEK 64.841 0.037185 0 3201.4 3543.8 3576.3 2546.1 2209.3 2195.1 3052.1 2648.1 4269.6 3912.6 TRUE FALSE 2929.104119 3313.097976 3333.55072 2742.201063 2121.298903 2319.384665 2848.499978 2624.947941 4713.440199 4397.322427 0.666110836 0.753435308 0.758086489 0.623607004 0.482406951 0.527453855 0.647780559 0.59694234 1.071888695 1 12.1024096 -8.261363798 24.99999442 1.035944395 0.632008 0.790379097 0.083215613 3.273005594 1083627.341 0.075395154 0.024308483 5.48E-09 8.261363798 -0.403936396 (ac)S(ph)DKPDMAEIEK ddPTM_A459_MK2206_30min_R2 1 SDKPDMAEIEK 11 1 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 S(1)DKPDMAEIEK 72.243 0.045062 46707000 109820 86694 102700 87231 80157 38930 101230 86108 56999 103180 TRUE FALSE 118227.9036 82388.90202 106123.9667 80103.94826 77009.63342 40411.50843 87938.3794 97362.61125 61956.66999 99813.24505 1.184491132 0.825430553 1.063225293 0.802538263 0.771537218 0.404871201 0.88102916 0.97544781 0.620725936 1 16.60694365 -5.849611306 5.329445415 0.763654716 1.003839588 0.27164942 0.182280201 0.285287627 13.18930703 0.052056836 0.079080481 1.41E-06 5.849611306 0.240184872 (ac)S(ph)DKPDMAEIEKFDK ddPTM_A459_MK2206_30min_R1 3 SDKPDMAEIEKFDK 14 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK 74.769 0.0032611 144425000 20087.8 24350.8 26432.2 21853.5 14954.1 11813.3 13919.9 16428.3 15683.5 12557.5 TRUE FALSE 18379.22712 22765.55849 24638.05591 23536.66036 14358.44653 12482.15884 12991.32887 16284.66911 17313.85595 14113.2179 1.302270485 1.613066464 1.745743322 1.66770332 1.017375812 0.884430392 0.920507921 1.153859397 1.226783011 1 13.78475935 -6.265169164 24.95914947 1.028383344 1.596082909 0.780637421 0.142314769 151.7462595 1015461.253 0.047203883 0.055589604 5.43E-07 6.265169164 0.567699565 (ac)S(ph)DKPDMAEIEKFDK ddPTM_A459_MK2206_30min_R2 4 SDKPDMAEIEKFDK 14 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK 62.162 0.019962 89919000 399594 498780 512670 433476 472430 289533 595670 422977 406835 533520 TRUE FALSE 430187.2239 474011.3105 529762.1619 398059.6242 453880.0244 300551.3812 517457.8135 478261.5462 442220.7729 516111.2861 0.833516405 0.918428493 1.026449481 0.77126704 0.879422785 0.582338324 1.002608987 0.926663607 0.856832208 1 18.97732265 -10.60742537 6.865806426 1.000000069 0.867640021 0.101815764 0.11899798 1.26E-07 1.68E-08 0.116424009 0.028236955 2.47E-11 10.60742537 -0.132360048 (ac)S(ph)DNDDIEVESDADKR ddPTM_A459_MK2206_30min_R1 1 SDNDDIEVESDADKR 15 1 A0A494C130;Q6V3B1;G3V563;G3V2R5;P61244-2 A0A494C130 MAX 1 S(1)DNDDIEVESDADKR 72.615 0.0046402 5854500 1196.5 1345.6 1333.3 1007.6 1126.8 1165.3 1257.4 1257.8 1116.7 1185.6 TRUE FALSE 1094.731392 1258.001195 1242.799311 1085.205527 1081.91717 1231.278279 1173.52114 1246.803187 1232.784961 1332.481079 0.821573686 0.944104359 0.932695654 0.814424718 0.811956873 0.924049353 0.880703793 0.935700482 0.925180088 1 10.37989933 -8.380384712 0.819124213 0.997110179 0.874097478 0.412936495 0.046662596 0.667017863 0.99789857 0.047264674 0.017634832 4.17E-09 8.380384712 -0.1230127 (ac)S(ph)DNDDIEVESDADKR ddPTM_A459_MK2206_30min_R2 3 SDNDDIEVESDADKR 15 1 A0A494C130;Q6V3B1;G3V563;G3V2R5;P61244-2 A0A494C130 MAX 1 S(1)DNDDIEVESDADKR;S(1)DNDDIEVESDADKR;S(1)DNDDIEVESDADKR 144.55 1.73E-05 118551000 116318 138720 122280.1 133070 130328 110506 131671 116215.2 105721 122667 TRUE FALSE 125223.3955 131831.3665 126356.8575 122197.7553 125210.6679 114711.3833 114382.4395 131404.9257 114916.4215 118664.3858 1.055273616 1.110959835 1.064825445 1.029776158 1.055166358 0.96668754 0.963915489 1.107366163 0.968415424 1 16.85652749 -5.948635796 1.422170348 1.008977731 1.08430723 0.334371315 0.043204549 0.50672413 2.080403115 0.015186433 0.0286656 1.13E-06 5.948635796 0.075329499 (ac)S(ph)DNGELEDKPPAPPVR ddPTM_A459_MK2206_30min_R1 5 SDNGELEDKPPAPPVR 16 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR 84.479 0.00017454 71600000 6855.31 7850.88 7692.29 6744.9 6807.9 6104.88 7219.12 7069.64 6562.65 6472.66 TRUE FALSE 6272.229886 7339.786285 7170.158787 7264.393367 6536.726927 6450.53303 6737.545677 7007.830883 7244.860952 7274.541987 0.862216466 1.008968853 0.98565089 0.998604913 0.898575737 0.886727033 0.926181427 0.963336372 0.995919876 1 12.8286407 -8.123473774 3.134077891 0.998696333 0.941617074 0.208061982 0.046026358 0.485485438 8.507026396 0.039999202 0.013035623 7.53E-09 8.123473774 -0.057079259 (ac)S(ph)DNGELEDKPPAPPVR ddPTM_A459_MK2206_30min_R2 2 SDNGELEDKPPAPPVR 16 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR 86.288 0.0040267 13870700 31287 34893 38214 37057 31403 30023 37567 26808 27275 40212 TRUE FALSE 33682.35678 33160.26436 39488.03569 34029.32456 30169.96043 31165.5463 32634.40777 30311.89765 29647.3302 38899.88573 0.865872898 0.852451459 1.015119581 0.874792404 0.775579667 0.80117321 0.838933255 0.77922845 0.762144403 1 15.2474783 -6.008221181 24.77490167 0.815494717 0.911891266 0.198986524 0.075404407 472.7174935 1424564.326 0.020795794 0.029267581 9.81E-07 6.008221181 0.096396549 (ac)S(ph)DQDHSMDEMTAVVK ddPTM_A459_MK2206_30min_R1 4 SDQDHSMDEMTAVVK 15 0 P08047;H3BUU5;P08047-3 P08047 SP1 Transcription factor Sp1 1 S(0.672)DQDHS(0.328)MDEMT(0.001)AVVK;S(1)DQDHSMDEMTAVVK;S(0.754)DQDHS(0.245)MDEMTAVVK;S(1)DQDHSMDEMTAVVK 115.29 9.35E-68 62069000 10062.3 9560.9 10668.2 8543.1 12015.7 9962.5 10676.6 10101.5 8148.5 7747.2 TRUE FALSE 9206.448546 8938.483672 9944.072307 9201.091042 11537.08923 10526.56814 9964.383495 10013.18365 8995.565735 8706.981624 1.057363957 1.026588094 1.142080314 1.056748646 1.325038885 1.208980172 1.144413061 1.150017777 1.03314399 1 13.08795696 -5.268504788 22.29400553 1.145230984 1.041976026 0.131232671 0.088536199 195.373269 616487.1865 0.023468814 0.050823129 5.39E-06 5.268504788 -0.103254958 (ac)S(ph)DQDHSMDEMTAVVK ddPTM_A459_MK2206_30min_R2 4 SDQDHSMDEMTAVVK 15 0 P08047;H3BUU5;P08047-3 P08047 SP1 Transcription factor Sp1 1 S(0.882)DQDHS(0.117)MDEMT(0.001)AVVK;S(0.968)DQDHS(0.032)MDEMTAVVK;S(0.91)DQDHS(0.08)MDEMT(0.01)AVVK;S(0.94)DQDHS(0.057)MDEMT(0.003)AVVK 106.29 1.02E-09 20860000 57142.4 84913 70285 84951 72995.3 78893 81200 60864.8 69563 66020.7 TRUE FALSE 61517.26608 80696.3439 72628.26682 78010.23156 70129.13775 81895.3284 70538.34246 68820.03834 75613.464 63866.44997 0.963217246 1.263516979 1.137189665 1.221458709 1.098059118 1.282290286 1.104466312 1.077561668 1.183930906 1 15.96277064 -10.62335998 4.438634867 0.999985799 1.15234163 0.19265842 0.090470967 60151097.82 0.976232695 9525.545829 0.020463377 2.38E-11 10.62335998 0.15235583 (ac)S(ph)DQEAKPSTEDLGDK ddPTM_A459_MK2206_30min_R1 4 SDQEAKPSTEDLGDK 15 1 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 1 S(0.998)DQEAKPS(0.001)TEDLGDK;S(0.999)DQEAKPS(0.001)TEDLGDK;S(0.992)DQEAKPS(0.006)T(0.002)EDLGDK;S(0.998)DQEAKPS(0.002)TEDLGDK 87.447 0.00048199 104726000 14040.5 17160.1 17618.1 12802.4 8816.3 9418.7 13150.3 10627.8 16526 18598.1 TRUE FALSE 12846.28175 16042.97437 16422.23246 13788.44307 8465.128102 9951.978655 12273.06748 10534.88227 18243.93684 20902.17304 0.614590728 0.767526627 0.785671061 0.659665531 0.404987945 0.476121724 0.58716706 0.504008949 0.872824888 1 14.35136532 -8.434315959 4.259003294 0.996730935 0.603570308 0.590395439 0.114176598 0.161796908 4.933590717 0.126151437 0.033041081 3.68E-09 8.434315959 -0.393160627 (ac)S(ph)DQEAKPSTEDLGDK ddPTM_A459_MK2206_30min_R2 2 SDQEAKPSTEDLGDK 15 1 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 1 S(0.994)DQEAKPS(0.004)T(0.002)EDLGDK;S(1)DQEAKPSTEDLGDK 90.913 0.0011256 148627000 372820 288970 316910 250750 254260 145941 364380 288680 167885 344580 TRUE FALSE 401363.3858 274620.17 327475.6212 230262.9229 244276.4748 151494.887 316536.4683 326411.4672 182487.3338 333336.3828 1.204079142 0.823852973 0.982417876 0.690782449 0.73282272 0.454480503 0.949600718 0.979225443 0.547456993 1 18.34661927 -1.78905295 0.976799617 0.769366941 199.9108326 0.317718105 0.18057736 955.5701589 2.641511728 0.057824497 423971.8155 0.016253506 1.78905295 199.1414656 (ac)S(ph)DQEAKPSTEDLGDKK ddPTM_A459_MK2206_30min_R1 4 SDQEAKPSTEDLGDKK 16 2 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 1 S(1)DQEAKPSTEDLGDKK;S(0.966)DQEAKPS(0.01)T(0.024)EDLGDKK;S(1)DQEAKPSTEDLGDKK;S(0.944)DQEAKPS(0.028)T(0.028)EDLGDKK 66.674 0.0012706 2604206000 22750.5 31252.2 28904.4 24372.6 15921.2 15468.9 18781.5 21061.6 25270.4 23668.4 TRUE FALSE 20815.45051 29217.6761 26942.44986 26249.78188 15287.02489 16344.73575 17528.6204 20877.46065 27897.34851 26600.62008 0.782517492 1.098383271 1.012850444 0.986810901 0.574686787 0.614449426 0.658955331 0.784848646 1.048748053 1 14.69917226 -6.223970443 23.92734541 0.755165902 0.982351567 0.237974274 0.162170493 438.8753022 280261.4221 0.049098193 0.063383349 5.97E-07 6.223970443 0.227185665 (ac)S(ph)DQEAKPSTEDLGDKK ddPTM_A459_MK2206_30min_R2 3 SDQEAKPSTEDLGDKK 16 2 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 1 S(0.999)DQEAKPS(0.001)T(0.001)EDLGDKK;S(0.885)DQEAKPS(0.108)T(0.008)EDLGDKK;S(0.999)DQEAKPS(0.001)T(0.001)EDLGDKK 57.414 0.001435 134748700 165451 158395 158612 133198 161813 87735 204227 162707 110867 188041 TRUE FALSE 178118.0558 150529.3346 163900.0449 122315.2973 155459.4086 91073.8169 177411.7496 183973.3636 120510.0113 181905.2376 0.979180469 0.827515121 0.901018833 0.67241218 0.854617551 0.500666271 0.975297644 1.011369249 0.662487858 1 17.47282756 -9.695832505 10.72088175 1.000033602 0.820488011 0.106815855 0.155711538 0 0 0.149520134 0.036263959 2.01E-10 9.695832505 -0.179545591 (ac)S(ph)DQEAKPSTEDLGDKKEGEYIK ddPTM_A459_MK2206_30min_R1 1 SDQEAKPSTEDLGDKKEGEYIK 22 3 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 1 S(0.921)DQEAKPS(0.039)T(0.039)EDLGDKKEGEYIK 59.154 0.0089401 23696000 5471.5 6043.8 7066.2 8458.9 5414.2 3105.4 3330.2 6870.8 2678.7 1748.2 TRUE FALSE 5006.120193 5650.347521 6586.566032 9110.405944 5198.540949 3281.225064 3108.048434 6810.72932 2957.160451 1964.780214 2.547928851 2.875816583 3.352316958 4.636857536 2.645863854 1.670021431 1.581880972 3.466407729 1.505084604 1 10.94015222 -6.52027531 17.05754789 2.001892249 3.359352627 0.443638791 0.78779713 1.854691815 12154.74456 0.261231038 0.268871911 3.02E-07 6.52027531 1.357460378 (ac)S(ph)DSGEQNYGER ddPTM_A459_MK2206_30min_R1 2 SDSGEQNYGER 11 0 P62995;P62995-2 P62995 TRA2B Transformer-2 protein homolog beta 1 S(0.994)DS(0.006)GEQNYGER;S(0.991)DS(0.009)GEQNYGER 106.68 0.00058221 1933800 226.544 299.2 226.7 306.57 299.44 244.2 203.26 323.402 67.786 57.672 TRUE FALSE 207.2752432 279.7220256 211.3122356 330.1820745 287.5126707 258.026393 189.7008963 320.5745304 74.83259727 64.81684276 3.197860839 4.315576225 3.260143917 5.094078336 4.435770989 3.98085408 2.926722256 4.945852293 1.154523949 1 6.018296843 -8.274004731 24.68399963 1.077260805 4.01612407 0.745320806 0.687982233 345.9188879 679531.9451 0.627909039 0.166741823 5.32E-09 8.274004731 2.938863265 (ac)S(ph)DSGEQNYGER ddPTM_A459_MK2206_30min_R2 2 SDSGEQNYGER 11 0 P62995;P62995-2 P62995 TRA2B Transformer-2 protein homolog beta 1 S(0.997)DS(0.003)GEQNYGER;S(1)DSGEQNYGER 140.83 1.61E-05 12314200 0 0 1016 0 0 1163.5 0 0 0 0 TRUE FALSE 0 0 1049.872933 0 0 1207.777808 0 0 0 0 0 (ac)S(ph)DVEENNFEGR ddPTM_A459_MK2206_30min_R1 2 SDVEENNFEGR 11 0 Q13595;F8WEH2 Q13595 TRA2A Transformer-2 protein homolog alpha 1 S(1)DVEENNFEGR;S(1)DVEENNFEGR 83.647 0.0030052 6778200 2244.7 2215.8 2480.8 2431.2 2345.8 1789.51 2052.6 2364.1 1775.6 1415.6 TRUE FALSE 2053.776478 2071.551017 2312.410208 2618.451445 2252.361819 1890.83051 1915.674799 2343.430923 1960.179974 1590.975215 1.29089156 1.302063663 1.453454577 1.645815359 1.415711444 1.188472637 1.204088399 1.472952501 1.232061917 1 10.63569565 -6.719112013 9.238109839 1.248185235 1.429530386 0.327145417 0.141733576 0.472692697 97.29310267 0.049090416 0.048868008 1.91E-07 6.719112013 0.181345151 (ac)S(ph)DVEENNFEGR ddPTM_A459_MK2206_30min_R2 2 SDVEENNFEGR 11 0 Q13595;F8WEH2 Q13595 TRA2A Transformer-2 protein homolog alpha 1 S(1)DVEENNFEGR;S(1)DVEENNFEGR 129.38 0.000516 14765800 0 0 0 2889.9 1076 0 977.23 0 1574.9 833.28 TRUE FALSE 0 0 0 2653.785926 1033.750834 0 848.9185271 0 1711.881955 806.0901418 0 0 0 3.292170178 1.282425848 0 1.053131012 0 2.123685512 1 9.654797368 (ac)S(ph)DVEENNFEGRES(ph)R ddPTM_A459_MK2206_30min_R2 5 SDVEENNFEGRESR 14 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 2 S(1)DVEENNFEGRES(1)R;S(1)DVEENNFEGRES(1)R;S(1)DVEENNFEGRES(1)R;S(1)DVEENNFEGRES(1)R;S(1)DVEENNFEGRES(1)R 122.16 8.48E-05 24416000 7248.87 4372.77 5771.56 9717.56 10443.89 6473.88 5841.91 4298.76 7385.36 6376.16 TRUE FALSE 7803.849061 4155.6246 5963.98093 8923.604263 10033.8104 6720.24804 5074.8602 4860.622692 8027.725263 6168.106421 1.265193647 0.673727773 0.966906295 1.446733187 1.626724592 1.089515579 0.82275821 0.788025102 1.301489422 1 12.59061194 -7.004951199 24.99486048 0.95979405 1.187073166 0.122186063 0.273033349 513.0025045 2589771.625 0.108243812 0.092905577 9.89E-08 7.004951199 0.227279115 (ac)S(ph)EGESQTVLSSGSDPK ddPTM_A459_MK2206_30min_R1 2 SEGESQTVLSSGSDPK 16 0 F8W6G1;Q9UHY1;C9JDW7;C9JHZ6 F8W6G1 NRBP1 Nuclear receptor-binding protein 1 S(0.974)EGES(0.026)QTVLSSGSDPK;S(0.988)EGES(0.012)QTVLSSGSDPK 80.17 0.00017016 11979400 9295.9 8664.1 9540.4 7030.6 8383.6 7411.3 7857.9 8470.5 8267.2 7332.3 TRUE FALSE 8505.23489 8100.065515 8892.824229 7572.09803 8049.663459 7830.921401 7333.713829 8396.443312 9126.605024 8240.68068 1.032103442 0.982936462 1.079137097 0.918868031 0.976820213 0.95027604 0.889940299 1.018901671 1.10750621 1 13.00854779 -7.99759324 24.99210597 1.056903399 0.975254447 0.245029233 0.055646538 93.82450708 974288.2301 0.031155168 0.014822743 1.01E-08 7.99759324 -0.081648952 (ac)S(ph)EGESQTVLSSGSDPK ddPTM_A459_MK2206_30min_R2 4 SEGESQTVLSSGSDPK 16 0 F8W6G1;Q9UHY1;C9JDW7;C9JHZ6 F8W6G1 NRBP1 Nuclear receptor-binding protein 1 S(0.919)EGES(0.081)QTVLSSGSDPK;S(0.948)EGES(0.052)QTVLSSGSDPK;S(0.976)EGES(0.024)QTVLSSGSDPK;S(0.984)EGES(0.016)QTVLSSGSDPK 120.57 3.76E-08 47036700 187093 214485 205980 213732 213815 181737 237814 165820 174867 210923 TRUE FALSE 201416.9839 203833.9868 212847.2704 196269.4119 205419.5488 188653.1289 206588.7361 187493.2433 190076.6156 204040.5998 0.987141697 0.998987393 1.043161364 0.961913522 1.006758209 0.92458623 1.012488379 0.918901648 0.931562717 1 17.63849672 -6.451160532 1.403693614 0.955713245 1.005216967 0.224345253 0.035259695 0.572236759 2.30205599 0.013983975 0.016535241 3.54E-07 6.451160532 0.049503722 (ac)S(ph)EKSVEAAAELSAK ddPTM_A459_MK2206_30min_R1 1 SEKSVEAAAELSAK 14 1 P20962;F5H7R9;F5GXR3 P20962 PTMS Parathymosin 1 S(0.858)EKS(0.142)VEAAAELSAK 60.49 0.0019092 6077200 1431.2 1413.3 1518.2 1336.6 1443.7 1214.3 1330.9 1336.5 984.27 948.35 TRUE FALSE 1309.468924 1321.293913 1415.148814 1439.545164 1386.194372 1283.052617 1242.118089 1324.815121 1086.588389 1065.838758 1.228580698 1.239675236 1.327732552 1.350621896 1.300566678 1.203796172 1.165390244 1.242978933 1.019467889 1 10.05777349 -8.100115629 0.815569823 0.990434071 1.286676703 0.76387629 0.054661205 0.298323282 0.404283459 0.054629707 0.021731566 7.94E-09 8.100115629 0.296242632 (ac)S(ph)EKSVEAAAELSAK ddPTM_A459_MK2206_30min_R2 3 SEKSVEAAAELSAK 14 1 P20962;F5H7R9;F5GXR3 P20962 PTMS Parathymosin 1 S(0.871)EKS(0.129)VEAAAELSAK;S(0.984)EKS(0.016)VEAAAELSAK;S(0.618)EKS(0.382)VEAAAELSAK 83.081 0.00053405 21169900 45343 72469 65266 66091 69892 52592 71686 52512 56577 57473 TRUE FALSE 48814.49494 68870.29484 67441.93587 60691.15389 67147.6889 54593.42541 62273.54209 59375.4987 61497.96519 55597.66072 0.877995482 1.238726485 1.213035495 1.091613444 1.20774306 0.981937454 1.120074861 1.067949585 1.106125049 1 15.76273656 -6.75710462 24.99845036 1.063517836 1.135039836 0.099523788 0.102859742 268.8117803 1550228.832 0.033643294 0.032519603 1.75E-07 6.75710462 0.071522 (ac)S(ph)ESGHSQPGLYGIER ddPTM_A459_MK2206_30min_R1 1 SESGHSQPGLYGIER 15 0 Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70;M0QYR7;M0R2N0;M0QZC7 Q9H0W8-2 SMG9 Protein SMG9 1 S(0.976)ES(0.024)GHSQPGLYGIER 110.64 2.04E-05 17097000 364.29 491.7 401.72 486.68 493.17 464.01 311.61 451.77 348.48 393.8 TRUE FALSE 333.3052225 459.6902406 374.4523657 524.1641779 473.5259946 490.2818452 290.8230655 447.8202225 384.705743 442.586917 0.753084219 1.038643988 0.846053851 1.184319187 1.069905088 1.107763981 0.657098198 1.011824356 0.869220775 1 8.789816995 (ac)S(ph)ESGHSQPGLYGIER ddPTM_A459_MK2206_30min_R2 3 SESGHSQPGLYGIER 15 0 Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70;M0QYR7;M0R2N0;M0QZC7 Q9H0W8-2 SMG9 Protein SMG9 1 S(1)ESGHSQPGLYGIER;S(0.632)ES(0.368)GHSQPGLYGIER;S(0.764)ES(0.095)GHS(0.142)QPGLYGIER 151.79 4.89E-20 47623000 3684.9 5326.3 974.77 4434.58 569.84 4226.2 6006.01 1116.1 1547.5 5857.5 TRUE FALSE 3967.018777 5061.803687 1007.268345 4072.260628 547.4652184 4387.031002 5217.413672 1261.978102 1682.098753 5666.370255 0.700098758 0.893306201 0.177762536 0.718671821 0.096616563 0.77422244 0.920768223 0.222713668 0.296856484 1 12.46820916 -5.219094104 24.99414741 0.512707874 0.796702563 0.108779053 0.3081317 1041.058791 614477.8906 0.076604175 0.202672213 6.04E-06 5.219094104 0.283994688 (ac)S(ph)ETAPAAPAAAPPAEK ddPTM_A459_MK2206_30min_R1 2 SETAPAAPAAAPPAEK 16 0 P16403 P16403 HIST1H1C Histone H1.2 1 S(0.5)ET(0.5)APAAPAAAPPAEK;S(0.5)ET(0.5)APAAPAAAPPAEK 80.312 0.00016324 27555000 10207.4 11468.9 13502.7 9073 10774.6 10313.6 9394.3 10937.3 9593.5 7308.3 TRUE FALSE 9339.207029 10722.27253 12586.17434 9771.804032 10345.42487 10897.54712 8767.623388 10841.67634 10590.77866 8213.707379 1.137026996 1.305412042 1.532337806 1.189694687 1.259531706 1.326751321 1.067438001 1.319949182 1.289402966 1 13.00381784 -7.185919798 24.99977867 1.195851481 1.297238264 0.159731703 0.131857787 286.4186294 94813.81722 0.050667618 0.039246961 6.52E-08 7.185919798 0.101386783 (ac)S(ph)ETAPAAPAAAPPAEKAPVK ddPTM_A459_MK2206_30min_R1 1 SETAPAAPAAAPPAEKAPVK 20 1 P16403 P16403 HIST1H1C Histone H1.2 1 S(0.5)ET(0.5)APAAPAAAPPAEKAPVK 68.168 0.00017803 5432800 1314.6 1410.1 1883.5 1825 2247.9 1586.1 1079.7 2203.9 537.33 191.06 TRUE FALSE 1202.786367 1318.302234 1755.653268 1965.561816 2158.361383 1675.903611 1007.675183 2184.631535 593.1873764 214.7299552 5.601390665 6.139349455 8.176098513 9.153645164 10.05151508 7.804703398 4.692755521 10.17385549 2.76248079 1 7.746379654 -5.059649095 6.856810222 7.225189693 5.726014321 0 2.945187484 0.833758426 81.0291392 0.711834611 1.966502033 8.72E-06 5.059649095 -1.499175371 (ac)S(ph)ETAPAAPAAPAPAEKTPVK ddPTM_A459_MK2206_30min_R1 4 SETAPAAPAAPAPAEKTPVK 20 1 P10412 P10412 HIST1H1E Histone H1.4 1 S(0.498)ET(0.498)APAAPAAPAPAEKT(0.005)PVK;S(0.5)ET(0.5)APAAPAAPAPAEKTPVK;S(0.5)ET(0.5)APAAPAAPAPAEKTPVK;S(0.5)ET(0.5)APAAPAAPAPAEKTPVK 134.99 1.50E-05 1582332000 17054 17957.3 19074.7 14985.5 10989.5 10588.9 10489.9 14538.9 13482.6 10368.6 TRUE FALSE 15603.46775 16788.27651 17779.96251 16139.68581 10551.76494 11188.43437 9790.137911 14411.78793 14884.16452 11653.14045 1.338992507 1.440665423 1.525765744 1.385007405 0.905486808 0.960121816 0.840128715 1.236729961 1.27726638 1 13.50843118 -6.176440147 5.918990647 1.035474589 1.436728653 0.665839837 0.134067533 0.153004771 8.497283711 0.043691044 0.056681794 6.66E-07 6.176440147 0.401254064 (ac)S(ph)ETAPAAPAAPAPAEKTPVK ddPTM_A459_MK2206_30min_R2 5 SETAPAAPAAPAPAEKTPVK 20 1 P10412 P10412 HIST1H1E Histone H1.4 1 S(0.465)ET(0.465)APAAPAAPAPAEKT(0.07)PVK;S(0.5)ET(0.5)APAAPAAPAPAEKTPVK;S(0.458)ET(0.458)APAAPAAPAPAEKT(0.084)PVK;S(0.5)ET(0.5)APAAPAAPAPAEKTPVK;S(0.498)ET(0.498)APAAPAAPAPAEKT(0.004)PVK 136.63 2.82E-06 1617266000 570463.7 646001.4 688177.9 510298.1 619291.7 404870.5 820145 689652.2 632642.2 681677.1 TRUE FALSE 614138.8395 613921.9098 711121.4077 468605.1129 594975.1962 420278.1306 712458.9763 779792.1105 687668.275 659434.0321 0.931312019 0.930983055 1.07838142 0.71061712 0.902251275 0.637331575 1.080409778 1.182517238 1.042815872 1 19.33086882 -7.475202978 24.96892186 1.093892817 0.871358409 0.412410307 0.122820094 376.3067821 197081.0951 0.051988077 0.03504925 3.35E-08 7.475202978 -0.222534407 (ac)S(ph)ETAPAAPAAPAPAEKTPVKK ddPTM_A459_MK2206_30min_R1 1 SETAPAAPAAPAPAEKTPVKK 21 2 P10412 P10412 HIST1H1E Histone H1.4 1 S(0.497)ET(0.497)APAAPAAPAPAEKT(0.007)PVKK 47.222 0.0023945 12154000 2047.2 2233.4 2000.6 1851.3 1535.2 1632.1 1669.6 1759 1458.9 1266.2 TRUE FALSE 1873.07489 2088.005254 1864.804846 1993.887447 1474.049733 1724.508092 1558.22403 1743.621248 1610.557876 1423.066415 1.316224506 1.467257769 1.310413081 1.401120443 1.03582638 1.211825445 1.094976323 1.225256411 1.131751729 1 10.47478728 -6.251117564 24.9913973 1.131548351 1.375908461 0.724393847 0.077371186 369.2961686 894147.3526 0.021524601 0.027483616 5.61E-07 6.251117564 0.24436011 (ac)S(ph)ETAPAETATPAPVEKSPAK ddPTM_A459_MK2206_30min_R1 3 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 1 S(0.969)ET(0.016)APAET(0.007)AT(0.005)PAPVEKS(0.003)PAK;S(0.9)ET(0.099)APAET(0.001)ATPAPVEKSPAK;S(0.921)ET(0.073)APAET(0.004)ATPAPVEKS(0.002)PAK 142.91 5.01E-13 871910000 15228.4 20190.9 22110 17629.9 11024.5 9950.4 10321 15563.5 15149.1 10364.1 TRUE FALSE 13933.14461 18876.46874 20609.2348 18987.75795 10585.37082 10513.78305 9632.504922 15427.42996 16723.90316 11648.08295 1.196174913 1.620564415 1.769324179 1.63011871 0.908765061 0.902619177 0.826960536 1.32446086 1.435764428 1 13.50780491 -6.254694139 24.9129277 1.062487535 1.574173972 0.53086396 0.224227708 432.0120529 1595595.987 0.072703513 0.091709742 5.56E-07 6.254694139 0.511686437 (ac)S(ph)ETAPAETATPAPVEKSPAK ddPTM_A459_MK2206_30min_R2 3 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 1 S(0.46)ET(0.143)APAET(0.205)AT(0.074)PAPVEKS(0.118)PAK;S(0.903)ET(0.039)APAET(0.039)AT(0.006)PAPVEKS(0.013)PAK;S(0.97)ET(0.029)APAETATPAPVEKSPAK 101.42 5.35E-09 930735000 577106.8 820692 777370.2 544028 751903.6 460763.7 1123365 916106 693324.2 726520 TRUE FALSE 621290.5403 779937.6287 803287.3345 499579.1721 722380.0867 478298.3855 975865.8261 1035844.2 753628.2857 702813.7119 0.88400458 1.109735931 1.14295911 0.710827298 1.027840058 0.680547885 1.388512787 1.473853145 1.072301625 1 19.42278281 -7.277363584 24.98076199 1.27315466 0.939050307 0.37340218 0.192114066 829.4577791 1301189.23 0.079523707 0.053808492 5.28E-08 7.277363584 -0.334104353 (ac)S(ph)ETAPAETATPAPVEKSPAKK ddPTM_A459_MK2206_30min_R1 1 SETAPAETATPAPVEKSPAKK 21 2 P16401 P16401 HIST1H1B Histone H1.5 1 S(0.545)ET(0.023)APAET(0.1)AT(0.076)PAPVEKS(0.256)PAKK 77.681 0.00011538 160770000 8554 11163 12252 9678.3 6344.2 6248.5 5384.2 8937.4 8609.6 6009.5 TRUE FALSE 7826.437381 10436.28667 11420.36838 10423.72434 6091.49708 6602.28467 5025.029842 8859.261254 9504.59873 6754.002229 1.158785134 1.545200359 1.690903851 1.543340376 0.901909249 0.977536644 0.744007726 1.311705409 1.407254307 1 12.72152694 -6.252557217 24.68800421 1.053024488 1.503628129 0.478388231 0.218294759 505.2560882 1404360.031 0.069645248 0.088504715 5.59E-07 6.252557217 0.450603641 (ac)S(ph)ETAPLAPTIPAPAEK ddPTM_A459_MK2206_30min_R1 4 SETAPLAPTIPAPAEK 16 0 P16402 P16402 HIST1H1D Histone H1.3 1 S(0.5)ET(0.5)APLAPTIPAPAEK;S(0.5)ET(0.5)APLAPTIPAPAEK;S(0.5)ET(0.5)APLAPTIPAPAEK;S(0.5)ET(0.5)APLAPTIPAPAEK 84.169 4.59E-05 40852000 18631.8 21390.5 23538 18541.2 20132.1 17267.8 17641.7 20526.4 17000.2 13734.4 TRUE FALSE 17047.06757 19997.97456 21940.30614 19969.24644 19330.19583 18245.48791 16464.85438 20346.93985 18767.43163 15435.92116 1.104376434 1.295547856 1.421379775 1.293686734 1.252286509 1.182014842 1.066658362 1.318155207 1.215828419 1 13.91400396 -6.663932609 3.235722824 1.170027857 1.288627662 0.224945687 0.107412552 0.419502472 8.733335289 0.0387457 0.038084043 2.17E-07 6.663932609 0.118599806 (ac)S(ph)FEGGDGAGPAMLATGTAR ddPTM_A459_MK2206_30min_R1 2 SFEGGDGAGPAMLATGTAR 19 0 Q96B36-3 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 S(1)FEGGDGAGPAMLATGTAR;S(1)FEGGDGAGPAMLATGTAR 177.67 9.10E-30 5140300 252 503.35 418.77 460.55 582.363 285.08 384.95 531.32 270.37 356.24 TRUE FALSE 230.5660767 470.5818235 390.3450592 496.0216408 559.1662485 301.2209832 359.2706879 526.6747253 298.475929 400.3737007 0.575877178 1.17535648 0.974951798 1.238896661 1.396610835 0.752349574 0.89733838 1.315457844 0.745493344 1 8.645203401 -4.753390606 24.9081062 1.06453031 0.575876241 0.311452596 0.213380237 352.0056971 1089242.757 0.052635523 0.567920095 1.76E-05 4.753390606 -0.48865407 (ac)S(ph)FLFSSR ddPTM_A459_MK2206_30min_R1 2 SFLFSSR 7 0 Q9H8S9-2;Q9H8S9 Q9H8S9-2 MOB1A MOB kinase activator 1A 1 S(1)FLFSSR;S(1)FLFSSR 89.369 0.0053839 11127100 386.27 622.6 436.77 481.85 424.48 498.24 547.581 445.75 366.47 385.02 TRUE FALSE 353.4157081 582.0686268 407.1232693 518.9621705 407.5720627 526.4499182 511.0528706 441.8528547 404.5658679 432.7191844 0.816732239 1.345141718 0.940848671 1.199304744 0.941885818 1.216608686 1.181026608 1.021107616 0.934938599 1 8.757287273 -7.990810564 20.80399181 0.970987093 1.098949049 0.101829549 0.149236313 49.75569027 112642.5128 0.075429868 0.036067461 1.02E-08 7.990810564 0.127961955 (ac)S(ph)GDEMIFDPTMSK ddPTM_A459_MK2206_30min_R1 11 SGDEMIFDPTMSK 13 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 S(1)GDEMIFDPTMSK;S(0.999)GDEMIFDPT(0.001)MSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(0.996)GDEMIFDPT(0.004)MSK;S(1)GDEMIFDPTMSK 120.68 0.00014242 936258270 63262.36 62216.82 63032.29 53525.32 62673.42 56158.79 59908.823 55619.95 54426.965 46999.35 TRUE FALSE 57881.56408 58166.49371 58753.83377 57647.84942 60177.00497 59338.45216 55912.41473 55133.67064 60084.84278 52821.9843 1.095785492 1.101179641 1.112298876 1.091360921 1.139241658 1.123366586 1.058506519 1.043763716 1.137496888 1 15.68885088 -14.52287875 0.228447059 0.467345505 1.110673008 0.505312955 0.029574006 136.3981311 1.361809544 33.52468294 0.053536279 3.00E-15 14.52287875 0.643327504 (ac)S(ph)GDEMIFDPTMSK ddPTM_A459_MK2206_30min_R2 9 SGDEMIFDPTMSK 13 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(0.997)GDEMIFDPT(0.003)MSK 139.15 9.84E-05 118358800 996994.4 1227586 1093472 1286571.6 1212242.1 1119137.6 1279513.5 984717.9 1074447.6 1170859.9 TRUE FALSE 1073325.058 1166625.864 1129927.811 1181454.585 1164643.384 1161727.166 1111511.84 1113423.911 1167901.11 1132654.837 0.947618835 1.029992391 0.997592359 1.043084394 1.028242096 1.025667421 0.981333239 0.983021371 1.031118282 1 20.11127685 -4.752266121 24.99794429 1.013096736 0.947618708 0.479309404 0.020548143 343.5273616 936074.6147 0.005372286 0.065485972 1.77E-05 4.752266121 -0.065478027 (ac)S(ph)GDEMIFDPTMSKK ddPTM_A459_MK2206_30min_R1 9 SGDEMIFDPTMSKK 14 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK 104.82 0.00040292 282703600 37345.7 38302.9 37730.1 40185.5 46257 31895.1 27620.6 42634.9 19810.31 11039.71 TRUE FALSE 34169.2521 35809.37425 35169.08593 43280.59417 44414.48574 33700.973 25778.08017 42262.14756 21869.66262 12407.39262 2.753943004 2.88613211 2.834526722 3.488290852 3.579679236 2.716201061 2.077638788 3.406206998 1.762631625 1 13.59891235 -8.465757247 3.897779802 1.007833909 2.956774785 0.705405664 0.42326646 0.111740054 3.486204125 0.430862187 0.113217474 3.42E-09 8.465757247 1.948940876 (ac)S(ph)GDEMIFDPTMSKK ddPTM_A459_MK2206_30min_R2 3 SGDEMIFDPTMSKK 14 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(0.999)GDEMIFDPT(0.001)MSKK 87.184 0.0010835 26275000 33591.9 94619 64523 79263 104141 83615 84271 51406 102425 60276 TRUE FALSE 36163.72169 89920.35805 66674.16462 72786.95935 100051.9011 86797.02742 73206.11647 58124.9407 111333.7414 58309.19906 0.620206113 1.542129878 1.143458763 1.248292903 1.715885361 1.488564906 1.255481428 0.996839978 1.909368387 1 15.83143589 -4.753090169 24.83335834 1.367143384 0.620204598 0.382513199 0.28452418 302.5893202 899926.7204 0.068083535 0.755921295 1.77E-05 4.753090169 -0.746938786 (ac)S(ph)GDHLHNDSQIEADFR ddPTM_A459_MK2206_30min_R1 1 SGDHLHNDSQIEADFR 16 0 P11387 P11387 TOP1 DNA topoisomerase 1 1 S(0.998)GDHLHNDS(0.002)QIEADFR 98.156 0.0005667 5634000 511.01 409.21 427.29 392.76 350.68 317.53 500.48 469.07 362.69 501.59 TRUE FALSE 467.5459161 382.5703546 398.2867453 423.0104433 336.711673 335.5082742 467.0938924 464.9689704 400.3929234 563.730756 0.829378052 0.678640203 0.706519453 0.750376733 0.597291649 0.595156944 0.828576208 0.824806817 0.710255595 1 9.13886247 -9.274615842 0.579345271 1.012314417 0.702722911 0.508550796 0.081869831 2.367034428 1.13931015 0.162713039 0.037370871 5.31E-10 9.274615842 -0.309591506 (ac)S(ph)GDHLHNDSQIEADFR ddPTM_A459_MK2206_30min_R2 2 SGDHLHNDSQIEADFR 16 0 P11387 P11387 TOP1 DNA topoisomerase 1 1 S(0.994)GDHLHNDS(0.006)QIEADFR;S(0.936)GDHLHNDS(0.064)QIEADFR 122.18 2.84E-12 7232300 4813.6 3182.9 5559.9 6986.9 4996.1 5821.1 10578.7 6899.6 4432.4 9488.6 TRUE FALSE 5182.132917 3024.841814 5745.264291 6416.04792 4799.928011 6042.62604 9189.703983 7801.40141 4817.92214 9178.987759 0.564564749 0.329539803 0.6259148 0.698992971 0.522925636 0.65831072 1.001167473 0.849919579 0.524885997 1 13.16411935 -4.985501304 0.184197108 1.005028614 1.94E-11 0.444562743 0.153281027 14.76047601 0.537427049 0.451367243 3.51548499 1.03E-05 4.985501304 -1.005028614 (ac)S(ph)GEDEQQEQTIAEDLVVTK ddPTM_A459_MK2206_30min_R1 12 SGEDEQQEQTIAEDLVVTK 19 0 Q9UQ80;F8VR77 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK 178.15 6.16E-117 455523600 96707.95 100410.63 100919.89 86390.36 100410.63 87852.44 96647.71 94273.27 82372.55 77765.13 TRUE FALSE 88482.43102 93873.87974 94069.72905 93044.1605 96411.06198 92826.56923 90200.51761 93449.04874 90935.47135 87399.2614 1.01239335 1.074080927 1.076321785 1.064587492 1.103110718 1.062097868 1.032051257 1.06922012 1.04046041 1 16.41533347 -8.906288466 0.763690702 0.999461294 1.065569894 0.388240939 0.023505731 1.373544452 1.448533804 0.024549572 0.008464019 1.24E-09 8.906288466 0.066108601 (ac)S(ph)GEDEQQEQTIAEDLVVTK ddPTM_A459_MK2206_30min_R2 10 SGEDEQQEQTIAEDLVVTK 19 0 Q9UQ80;F8VR77 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(0.998)GEDEQQEQT(0.002)IAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK 158.58 4.19E-64 105702200 855970.1 1043488.8 892434.5 1087989.2 1002913.7 980821.6 1067038.5 846789 953548.9 986680.6 TRUE FALSE 921503.829 991670.6636 922187.8208 999097.0021 963534.2689 1018147.453 926935.0632 957467.2298 1036486.86 954485.2928 0.965445812 1.038958558 0.96616242 1.046739022 1.009480477 1.066697896 0.971136035 1.003124131 1.085911818 1 19.86436344 -5.769907831 24.99970462 1.024987775 0.995065891 0.16029593 0.03715752 387.802271 1144834.982 0.010129198 0.015299712 1.70E-06 5.769907831 -0.029921885 (ac)S(ph)GGGVIR ddPTM_A459_MK2206_30min_R1 1 SGGGVIR 7 0 J3KTL2;Q07955;Q07955-3;Q07955-2;J3QQV5;J3KSW7 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 1 S(1)GGGVIR 44.531 0.043543 1529000 314.4 432.42 390.85 498.06 379.05 209.5 355.78 408.29 265.03 331.25 TRUE FALSE 287.658629 404.2693794 364.320191 536.4206675 363.9516358 221.361709 332.0465654 404.7203636 292.5808169 372.2877508 0.7726782 1.08590567 0.978598383 1.44087649 0.977608409 0.594598421 0.891908382 1.087117056 0.78589966 1 8.540274339 -6.523620997 24.99996632 0.868322379 1.08232283 0.184086999 0.195626388 42.39102782 1427703.536 0.06540915 0.065957272 2.99E-07 6.523620997 0.214000451 (ac)S(ph)KGPAVGIDLGTTYSCVGVFQHGK ddPTM_A459_MK2206_30min_R1 2 SKGPAVGIDLGTTYSCVGVFQHGK 24 1 P11142;E9PKE3;P11142-2;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PNE6;E9PI65;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 S(0.977)KGPAVGIDLGT(0.017)T(0.004)Y(0.001)S(0.001)CVGVFQHGK;S(0.996)KGPAVGIDLGT(0.003)T(0.001)Y(0.001)SCVGVFQHGK 78.413 6.56E-08 23030000 3340.08 3727.52 4265.9 3571.18 3077.31 2326.01 3224.06 2999.59 2800.21 2805.48 TRUE FALSE 3055.988657 3484.85777 3976.342593 3846.232902 2954.734226 2457.706676 3008.98884 2973.364901 3091.30185 3153.044043 0.969218512 1.105235995 1.26111229 1.219847503 0.937105282 0.77947109 0.95431234 0.943014072 0.980418227 1 11.62252961 -6.291379224 12.33800318 0.92295157 1.145174747 0.550460055 0.091096033 1.229271097 505.5662806 0.030126079 0.03430046 5.11E-07 6.291379224 0.222223177 (ac)S(ph)KS(ph)ESPKEPEQLR ddPTM_A459_MK2206_30min_R2 1 SKSESPKEPEQLR 13 2 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 2 S(0.667)KS(0.667)ES(0.667)PKEPEQLR 68.657 0.0025363 10307000 99123 75070 85189 54969 54371 29052 81758 61925 42562 79301 TRUE FALSE 106711.9331 71342.13296 88029.15874 50477.85686 52236.12135 30157.59422 71023.07639 70018.81012 46263.96583 76713.41486 1.391046576 0.929982495 1.147506716 0.658005604 0.680925513 0.393120216 0.925823424 0.912732281 0.603075302 1 16.22719126 -4.852815787 0.987937869 0.734827563 1.600080844 0.47058947 0.199655909 1.608900361 1.356981276 0.0683081 1.451301473 1.40E-05 4.852815787 0.865253281 (ac)S(ph)KS(ph)ESPKEPEQLRK ddPTM_A459_MK2206_30min_R1 1 SKSESPKEPEQLRK 14 3 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 2 S(0.951)KS(0.592)ES(0.457)PKEPEQLRK 50.286 0.031994 7958100 4634 8247.2 8464 7434.6 3128.2 2861.4 3858.7 4542.1 5806.6 4546.9 TRUE FALSE 4239.853966 7710.305781 7889.487262 8007.21418 3003.59717 3023.409995 3601.293164 4502.388899 6410.216849 5110.204299 0.829683848 1.508805779 1.543869247 1.566906861 0.587764597 0.591641707 0.704725869 0.881058493 1.254395416 1 12.31916525 -6.258838399 24.9995456 0.811809212 1.385748025 0.474393525 0.269889219 201.5913699 1937611.041 0.084717851 0.10440335 5.51E-07 6.258838399 0.573938813 (ac)S(ph)KSESPKEPEQLR ddPTM_A459_MK2206_30min_R1 6 SKSESPKEPEQLR 13 2 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 S(0.96)KS(0.04)ESPKEPEQLR;S(0.965)KS(0.035)ESPKEPEQLR;S(0.971)KS(0.029)ESPKEPEQLR;S(0.968)KS(0.032)ESPKEPEQLR;S(0.996)KS(0.003)ES(0.001)PKEPEQLR;S(0.965)KS(0.035)ESPKEPEQLR 112.3 0.0016848 55357500 14204.1 18062.9 19888.6 21943 15618.7 10655.4 10598.66 17358.9 11333.82 9150.4 TRUE FALSE 12995.96671 16887.00193 18538.61724 23633.05366 14996.57411 11258.69954 9891.64273 17207.13297 12512.01115 10284.02063 1.263704845 1.642062237 1.802662393 2.298036391 1.458240375 1.094776055 0.961845866 1.673191214 1.216645862 1 13.32811679 -6.517823383 22.73042566 1.223745874 1.763774952 0.439241433 0.298189568 69.5801989 312859.0953 0.101344157 0.104430685 3.04E-07 6.517823383 0.540029078 (ac)S(ph)NGYEDHMAEDCR ddPTM_A459_MK2206_30min_R1 1 SNGYEDHMAEDCR 13 0 Q15717;M0QZR9 Q15717 ELAVL1 ELAV-like protein 1 1 S(0.891)NGY(0.109)EDHMAEDCR 69.721 0.0042511 0 812.68 759.55 735.95 962.18 856.1 546.13 664.04 957.12 513.37 570.54 TRUE FALSE 743.5572984 710.1031569 685.9957645 1036.28727 821.9997242 577.0514086 619.7431032 948.7520007 566.7366486 641.2228026 1.159592727 1.107420313 1.069824345 1.616111071 1.281925285 0.899923406 0.966501972 1.479598038 0.883837328 1 9.32468192 -6.725381594 24.99907197 1.070979888 1.249887715 0.180822204 0.210528918 367.5395484 254816.3528 0.072301524 0.072299237 1.88E-07 6.725381594 0.178907827 (ac)S(ph)QGDSNPAAIPHAAEDIQGDDR ddPTM_A459_MK2206_30min_R2 1 SQGDSNPAAIPHAAEDIQGDDR 22 0 P68402-3;P68402-2;P68402-4;P68402 P68402-3 PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta 1 S(0.818)QGDS(0.182)NPAAIPHAAEDIQGDDR 116.86 1.89E-22 23306000 80685 94269 84906 103970 78942 95751 88682 75768 81706 86027 TRUE FALSE 86862.30564 89587.73854 87736.72366 95475.31842 75842.34043 99394.8714 77037.94687 85671.13775 88812.64019 83219.94604 1.043767868 1.076517624 1.054275181 1.147264844 0.911348109 1.194363565 0.925714934 1.029454378 1.06720377 1 16.34464173 -7.296592686 24.99911999 1.008047846 1.066910001 0.148623632 0.076478414 1335.88286 950002.4847 0.030199637 0.02036185 5.05E-08 7.296592686 0.058862155 (ac)S(ph)QKQEEENPAEETGEEK ddPTM_A459_MK2206_30min_R2 1 SQKQEEENPAEETGEEK 17 1 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-8 A6NMQ3 ENSA Alpha-endosulfine 1 S(1)QKQEEENPAEETGEEK 171.49 3.29E-16 7985500 55031 40538 39736 36595 33682 18365 48227 36045 24319 52379 TRUE FALSE 59244.21567 38524.94187 41060.77841 33605.07144 32359.47544 19063.89294 41894.73697 40756.20526 26434.22266 50669.87752 1.169219634 0.760312512 0.810358746 0.66321596 0.638633386 0.376237202 0.826817411 0.804347815 0.521695018 1 15.62884072 (ac)S(ph)QKQEEENPAEETGEEKQDTQEK ddPTM_A459_MK2206_30min_R1 1 SQKQEEENPAEETGEEKQDTQEK 23 2 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-8 A6NMQ3 ENSA Alpha-endosulfine 1 S(1)QKQEEENPAEETGEEKQDTQEK 67.312 0.00011118 6900400 4584.3 5375 4649.2 4238.3 3869 3862.8 4152.6 4142.7 3714.9 3841.2 TRUE FALSE 4194.381212 5025.086523 4333.625257 4564.7346 3714.889537 4081.508398 3875.587631 4106.480811 4101.077149 4317.076856 0.971578999 1.164002099 1.003833242 1.057366999 0.860510401 0.945433342 0.897734222 0.951217907 0.949966212 1 12.07583906 -6.239819245 24.23754891 0.930448588 1.054155695 0.487082401 0.057674632 425.4919242 477002.9681 0.016079808 0.020737133 5.76E-07 6.239819245 0.123707107 (ac)S(ph)QKQEEENPAEETGEEKQDTQEK ddPTM_A459_MK2206_30min_R2 3 SQKQEEENPAEETGEEKQDTQEK 23 2 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-8 A6NMQ3 ENSA Alpha-endosulfine 1 S(1)QKQEEENPAEETGEEKQDTQEK;S(1)QKQEEENPAEETGEEKQDTQEK;S(0.999)QKQEEENPAEET(0.001)GEEKQDTQEK 92.133 1.90E-05 30135800 140093 165974 153834 146081 156287 119540 162707 127548 124598 175522 TRUE FALSE 150818.6278 157731.9725 158962.7488 134145.715 150150.3871 124089.1785 141343.3755 144218.9615 135435.3088 169794.7315 0.888240916 0.928956812 0.936205425 0.790046392 0.884305336 0.73081878 0.832436756 0.849372417 0.797641409 1 17.37343217 -5.751696831 24.99871861 0.831283189 0.918916646 0.205672047 0.067728369 266.357901 683449.6875 0.017229807 0.029367212 1.77E-06 5.751696831 0.087633458 (ac)S(ph)QPGQKPAASPRPR ddPTM_A459_MK2206_30min_R2 1 SQPGQKPAASPRPR 14 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 S(0.565)QPGQKPAAS(0.435)PRPR 59.796 0.044648 19623000 18313 27921 25981 29544 24032 27441 29009 17669 26402 25282 TRUE FALSE 19715.05736 26534.48374 26847.19357 27130.16069 23088.38293 28485.28648 25200.08345 19978.39897 28698.39824 24457.05041 0.806109364 1.084942104 1.097728186 1.109298147 0.944037917 1.164706537 1.030381139 0.816876877 1.173420251 1 14.5779628 -10.3772681 14.90905092 0.999998822 1.027366837 0.00343632 0.124653861 0 0 0.116321037 0.028211995 4.19E-11 10.3772681 0.027368015 (ac)S(ph)RHEGVSCDACLK ddPTM_A459_MK2206_30min_R1 1 SRHEGVSCDACLK 13 1 Q9P0J7 Q9P0J7 KCMF1 E3 ubiquitin-protein ligase KCMF1 1 S(1)RHEGVSCDACLK 64.73 0.0050181 6778000 1267 1051.6 1498.9 1352.3 1407.5 1157.6 1435.4 1138.5 654.84 725.25 TRUE FALSE 1159.234997 983.1406489 1397.158844 1456.45438 1351.436295 1223.142312 1339.647085 1128.546215 722.9129614 815.0994454 1.422200694 1.20616037 1.714096178 1.786842561 1.658001735 1.50060501 1.643538212 1.38455034 0.88690155 1 9.670832274 -8.129239603 3.51499451 0.943246997 1.562329852 0.702655785 0.158206284 0.147819769 3.174164701 0.137484354 0.045804954 7.43E-09 8.129239603 0.619082855 (ac)S(ph)RHEGVSCDACLK ddPTM_A459_MK2206_30min_R2 1 SRHEGVSCDACLK 13 1 Q9P0J7 Q9P0J7 KCMF1 E3 ubiquitin-protein ligase KCMF1 1 S(0.84)RHEGVS(0.16)CDACLK 47.915 0.025515 9360400 47216 83447 56091 81958 84849 93210 69955 55613 74524 74949 TRUE FALSE 50830.89326 79303.14332 57961.04594 75261.76923 81517.40193 96757.17187 60769.82447 62881.81005 81005.96281 72503.42027 0.701082695 1.093784859 0.799424989 1.038044398 1.124324916 1.334518723 0.838164934 0.867294395 1.117270916 1 16.14576143 -4.753194302 24.81872684 1.020008025 0.701082046 0.288657084 0.151813369 399.766837 1203245.876 0.039452499 0.43305573 1.77E-05 4.753194302 -0.318925979 (ac)S(ph)SILPFTPPIVK ddPTM_A459_MK2206_30min_R1 1 SSILPFTPPIVK 12 0 P84022 P84022 SMAD3 Mothers against decapentaplegic homolog 3 1 S(0.5)S(0.5)ILPFTPPIVK 128.36 0.0046341 17096000 4513 4929.9 4584.7 3898.9 5113.2 4101.1 4220.5 4338.5 4079.1 3731.4 TRUE FALSE 4129.145651 4608.962614 4273.503338 4199.193954 4909.530417 4333.300738 3938.958146 4300.568952 4503.137042 4193.674003 0.984612931 1.099027395 1.019035656 1.001316257 1.170699109 1.033294609 0.939261884 1.025489571 1.073792822 1 12.033999 -9.635572615 7.839162646 1 1.039050446 0.034649177 0.060908395 15961786.6 19619560.82 0.060128019 0.015032005 2.31E-10 9.635572615 0.039050446 (ac)S(ph)SNSASAANGNDSKK ddPTM_A459_MK2206_30min_R2 1 SSNSASAANGNDSKK 15 1 A6NLN1;K7ES59 A6NLN1 PTBP1 1 S(0.333)S(0.333)NS(0.333)AS(0.001)AANGNDSKK 87.184 0.0032468 0 3391.5 3787.2 4303.2 4049.3 4003.8 3712.9 4074.4 2858.6 3591.6 4765 TRUE FALSE 3651.155848 3599.133155 4446.66654 3718.459237 3846.590695 3854.197011 3539.426386 3232.228835 3903.990876 4609.51844 0.792090518 0.78080459 0.964670518 0.806691477 0.834488623 0.836138755 0.76785166 0.701207486 0.846941156 1 12.17040032 -7.053282519 23.47185314 0.803799864 0.837951614 0 0.086364938 721.4208544 317794.1513 0.032131104 0.024888968 8.85E-08 7.053282519 0.03415175 (ac)S(ph)SPASTPSR ddPTM_A459_MK2206_30min_R1 1 SSPASTPSR 9 0 A0A3B3ITP6;A0A3B3IT92;P33991;A0A3B3IS57;E5RFR3;E5RG53;A0A3B3IS88 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 S(0.499)S(0.499)PAS(0.001)TPSR 71.501 0.022673 815350 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)S(ph)SPASTPSRR ddPTM_A459_MK2206_30min_R2 2 SSPASTPSRR 10 1 A0A3B3ITP6;A0A3B3IT92;P33991;A0A3B3IS57;E5RFR3;E5RG53;A0A3B3IS88 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 S(0.5)S(0.5)PASTPSRR;S(0.5)S(0.5)PASTPSRR 66.351 0.041362 1160530 0 0 0 918.69 465.65 710.83 0 856.57 1356.27 0 TRUE FALSE 0 0 0 843.6300883 447.3662413 737.8811338 0 968.52664 1474.235913 0 0 (ac)S(ph)SPPEGK ddPTM_A459_MK2206_30min_R1 1 SSPPEGK 7 0 P51397;B4DQ75 P51397 DAP Death-associated protein 1 1 S(0.927)S(0.073)PPEGK 81.297 0.01966 41043000 6661.8 7293.5 5716.7 5049.1 5126.1 5145.8 7563 7176.4 3158 6526.3 TRUE FALSE 6095.178927 6818.691824 5328.666332 5437.982557 4921.916582 5437.150749 7058.486069 7113.657491 3486.285401 7334.827315 0.830991469 0.929632223 0.726488314 0.741392036 0.671033737 0.741278631 0.962324778 0.969846622 0.475305723 1 12.84054729 -9.583802412 14.77671535 1.000000018 0.790790342 0.169170469 0.143274895 0 0 0.139215237 0.033764655 2.61E-10 9.583802412 -0.209209676 (ac)S(ph)SSAGSGHQPSQSR ddPTM_A459_MK2206_30min_R2 2 SSSAGSGHQPSQSR 14 0 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 1 S(0.495)S(0.495)S(0.01)AGSGHQPSQSR;S(0.907)S(0.082)S(0.011)AGSGHQPSQSR 134.38 6.22E-36 2104690 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)S(ph)SSGTPDLPVLLTDLK ddPTM_A459_MK2206_30min_R1 2 SSSGTPDLPVLLTDLK 16 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 1 S(0.258)S(0.258)S(0.258)GT(0.227)PDLPVLLTDLK;S(0.273)S(0.273)S(0.273)GT(0.181)PDLPVLLTDLK 158.31 4.45E-07 15160000 4453.4 4870.03 4896.37 4030.68 4867.45 4186.61 4913.1 5232.6 4427.1 4253.9 TRUE FALSE 4074.614944 4552.990162 4564.018046 4341.123672 4673.56916 4423.65224 4585.356063 5186.85193 4887.312888 4780.905247 0.8522685 0.952328048 0.9546347 0.908012907 0.977549003 0.925275029 0.959097875 1.084910004 1.022256798 1 12.2230681 -7.610174099 5.685932943 1.039367798 0.932710794 0.620460564 0.03740165 0.130464965 6.656589004 0.017391502 0.009868091 2.45E-08 7.610174099 -0.106657004 (ac)S(ph)SSGTPDLPVLLTDLK ddPTM_A459_MK2206_30min_R2 3 SSSGTPDLPVLLTDLK 16 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 1 S(0.477)S(0.477)S(0.03)GT(0.016)PDLPVLLTDLK;S(0.333)S(0.333)S(0.333)GTPDLPVLLTDLK;S(0.25)S(0.25)S(0.25)GT(0.25)PDLPVLLTDLK 159.94 1.01E-62 56180000 293472 353800 339530 375740 347900 295091 365150 311997 319050 337820 TRUE FALSE 315940.442 336230.8065 350849.7607 345040.8401 334239.6979 306320.8948 317205.3664 352776.0791 346800.3923 326796.9611 0.966779008 1.028867604 1.073601663 1.055826342 1.022774804 0.937343156 0.970649682 1.079496205 1.061210579 1 18.31803504 -11.28889877 2.669526142 0.994721425 1.022300194 0.01944144 0.046424861 23682459.38 16644193.73 813941.3648 0.012694855 5.14E-12 11.28889877 0.027578768 (ac)S(ph)SSPVNVK ddPTM_A459_MK2206_30min_R2 3 SSSPVNVK 8 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.492)S(0.492)S(0.016)PVNVK;S(0.477)S(0.477)S(0.046)PVNVK;S(0.35)S(0.35)S(0.3)PVNVK 58.604 0.012101 33734400 170811 296388 256652 236044 343222 227323 270453 182689 302996 228679 TRUE FALSE 183888.4215 281669.8029 265208.6496 216758.4501 329745.3797 235973.9361 234942.1962 206567.0796 329350.0444 221217.223 0.831257255 1.273272484 1.198860767 0.979844369 1.490595422 1.066706891 1.062042969 0.933774852 1.48880833 1 17.75510419 -4.749386049 24.92393374 1.16292323 0.831256474 0.219130922 0.18948454 842.7834166 1742600.56 0.045129827 0.73914096 1.78E-05 4.749386049 -0.331666755 (ac)S(ph)TEAQRVDDSPSTSGGSSDGDQR ddPTM_A459_MK2206_30min_R1 1 STEAQRVDDSPSTSGGSSDGDQR 23 1 F8WF15;F8W8F0;C9J180;Q96LR5 F8WF15 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 S(0.307)T(0.307)EAQRVDDS(0.118)PS(0.014)T(0.014)S(0.223)GGS(0.014)S(0.004)DGDQR 100.73 5.02E-24 1921800 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)S(ph)TVHEILCK ddPTM_A459_MK2206_30min_R1 4 STVHEILCK 9 0 P07355;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YNP5;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 S(0.5)T(0.5)VHEILCK;S(0.5)T(0.5)VHEILCK;S(0.5)T(0.5)VHEILCK;S(0.5)T(0.5)VHEILCK 72.485 0.0022787 60417200 35439.2 33881.3 33481.8 32104.8 38418.7 31308.8 35139.9 32609.1 29185.2 25363.3 TRUE FALSE 32424.90994 31675.62121 31209.1487 34577.51726 36888.40183 33081.4772 32795.78139 32324.00208 32219.10598 28505.49709 1.137496738 1.111210975 1.094846675 1.213012253 1.294080286 1.160529743 1.150507261 1.133956794 1.130276939 1 14.79895254 -8.915168605 0.990133589 1.000138635 1.16715312 0.460884024 0.053018999 1.367565451 2.226494674 0.058189518 0.018687273 1.22E-09 8.915168605 0.167014486 (ac)S(ph)TVHEILCK ddPTM_A459_MK2206_30min_R2 4 STVHEILCK 9 0 P07355;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YNP5;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 S(0.5)T(0.5)VHEILCK;S(0.5)T(0.5)VHEILCK;S(0.5)T(0.5)VHEILCK;S(0.5)T(0.5)VHEILCK 75.38 0.0026197 74635900 420101 506322 458418 556472 482233 490614 593899 444574 527869 449908 TRUE FALSE 452264.2556 481178.7857 473701.4273 511006.4575 463298.1094 509284.6596 515919.3479 502681.3483 573782.0915 435227.5388 1.039144391 1.105579824 1.088399481 1.174113336 1.064496311 1.170157249 1.185401432 1.154985159 1.318349691 1 18.73141032 -6.83784107 7.54044378 1.177296565 1.099188364 0.161026353 0.079059262 0.399983002 33.70857083 0.026470292 0.023386557 1.45E-07 6.83784107 -0.078108201 (ac)S(ph)TVHEILCKLSLEGDHSTPPSAYGSVK ddPTM_A459_MK2206_30min_R1 1 STVHEILCKLSLEGDHSTPPSAYGSVK 27 1 P07355;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 S(0.412)T(0.412)VHEILCKLS(0.033)LEGDHS(0.109)T(0.033)PPS(0.001)AYGSVK 46.504 4.29E-05 263690000 7375.3 3789 5687.7 3629.4 8885 7380.2 7559.3 7441.2 3370.3 3005.4 TRUE FALSE 6747.992006 3542.335411 5301.634771 3908.937017 8531.091636 7798.060546 7055.03289 7376.142373 3720.654746 3377.731642 1.997788078 1.048732045 1.569584364 1.157266897 2.525686627 2.308667879 2.088689582 2.183756188 1.101524674 1 11.721839 -6.239609462 24.98980883 1.960304502 1.424173623 0.122313943 0.522445084 1345.117478 1539824.035 0.150141544 0.193669757 5.76E-07 6.239609462 -0.536130879 (ac)S(ph)TVHEILCKLSLEGDHSTPPSAYGSVK ddPTM_A459_MK2206_30min_R2 1 STVHEILCKLSLEGDHSTPPSAYGSVK 27 1 P07355;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 S(0.376)T(0.376)VHEILCKLS(0.108)LEGDHS(0.108)T(0.033)PPSAYGSVK 42.708 0.00043833 38101000 6520 18072 14615 28932 21051 21194 21063 16320 21108 16344 TRUE FALSE 7019.176213 17174.57076 15102.25681 26568.16305 20224.43197 22000.55252 18297.4028 18453.08003 22943.93569 15810.69662 0.443951104 1.086262748 0.955192372 1.68039168 1.279161346 1.391497987 1.157279988 1.167126312 1.451165388 1 13.94861331 -4.673976091 1.448788299 1.292138049 7.09E-16 0.599839213 0.200951163 1.026423189 1.644245546 0.055977449 2.072988189 2.12E-05 4.673976091 -1.292138049 (ac)S(ph)VAGGEIR ddPTM_A459_MK2206_30min_R1 1 SVAGGEIR 8 0 Q9H773 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 S(1)VAGGEIR 40.268 0.036518 2455700 343.24 392.81 316.16 452.26 385.85 213.96 221.68 454.26 122.92 99.673 TRUE FALSE 314.0456356 367.2379976 294.6999401 487.0931436 370.4807774 226.0742303 206.8921317 450.2884527 135.6979739 112.0212437 2.803447142 3.27828888 2.630750474 4.348221171 3.30723678 2.018137121 1.846900863 4.019670178 1.211359286 1 6.807628541 -6.756015642 24.88000922 2.197173286 3.297838749 0.329553934 0.876042048 170.6435176 782783.0135 0.287305673 0.279402566 1.75E-07 6.756015642 1.100665464 (ac)S(ph)VELEEALPVTTAEGMAK ddPTM_A459_MK2206_30min_R1 2 SVELEEALPVTTAEGMAK 18 0 Q92522 Q92522 H1FX Histone H1x 1 S(1)VELEEALPVTTAEGMAK;S(1)VELEEALPVTTAEGMAK 121.04 8.41E-10 5654800 696.5 951.21 754.51 722.56 797.57 609.4 638.67 683.08 714.99 548.63 TRUE FALSE 637.2590175 889.2860561 703.2959634 778.2116964 765.801098 643.9037014 596.0654896 677.1079036 789.3157691 616.5984263 1.033507369 1.442245095 1.14060616 1.262104578 1.241977056 1.044283725 0.966699661 1.098134336 1.280113175 1 9.268187397 -6.75595356 24.91979275 1.077032912 1.233682059 0.256080842 0.124086702 173.9006933 789957.5768 0.040525099 0.039422484 1.75E-07 6.75595356 0.156649147 (ac)S(ph)YGRPPPDVEGMTSLK ddPTM_A459_MK2206_30min_R1 2 SYGRPPPDVEGMTSLK 16 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 S(0.598)Y(0.402)GRPPPDVEGMTSLK;S(0.56)Y(0.44)GRPPPDVEGMTSLK 89.356 0.00093056 24320000 2822.2 2706 2698.4 2098.22 2804.3 2392.9 3013.8 2699.3 2611.7 2279.8 TRUE FALSE 2582.15707 2529.838908 2515.240126 2259.825268 2692.598793 2528.38393 2812.754901 2675.700305 2883.195561 2562.238836 1.007773762 0.987354837 0.981657171 0.88197292 1.050877364 0.986786983 1.097772332 1.04428216 1.125264172 1 11.32318925 -6.919795456 1.668053936 1.069512452 0.971799848 0.387327435 0.050594289 0.359865913 2.048359657 0.022571791 0.018154177 1.20E-07 6.919795456 -0.097712604 (ac)S(ph)YGRPPPDVEGMTSLK ddPTM_A459_MK2206_30min_R2 2 SYGRPPPDVEGMTSLK 16 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 S(0.602)Y(0.398)GRPPPDVEGMTSLK;S(0.57)Y(0.43)GRPPPDVEGMTSLK 105.25 0.00047014 14368300 30593 34320 31542 35536 32459 32767 40024 27438 32719 32435 TRUE FALSE 32935.2236 32615.71871 32593.59454 32632.59513 31184.49657 34013.97115 34768.80072 31024.24081 35564.83948 31376.64861 1.049673087 1.039490199 1.038785083 1.040028065 0.993875954 1.084053672 1.108110721 0.988768469 1.133481141 1 14.93740364 -6.788715716 24.99822249 1.065007568 1.033547758 0.108476481 0.043458339 492.2752884 451157.0547 0.01449782 0.012789548 1.63E-07 6.788715716 -0.03145981 (ac)SASAPAAEGEGT(ph)PTQPASEKEPEMPGPR ddPTM_A459_MK2206_30min_R1 1 SASAPAAEGEGTPTQPASEKEPEMPGPR 28 1 D6R9L5;H0Y8X0;A0A494C198;B4DFG0;H0Y993;P35659;P35659-2 D6R9L5 DEK Protein DEK 1 S(0.012)AS(0.011)APAAEGEGT(0.975)PT(0.003)QPASEKEPEMPGPR 97.94 1.56E-12 17155000 3161.7 3302.3 3149.3 2459 2774.2 2745.4 3249.8 2678 3158.7 3889.7 TRUE FALSE 2892.780812 3087.31967 2935.53429 2648.392606 2663.69774 2900.842175 3033.011772 2654.586528 3487.058169 4371.585402 0.661723504 0.706224261 0.671503361 0.605819711 0.60932076 0.663567541 0.693801331 0.607236571 0.797664428 1 12.09394087 -8.563654658 3.287393233 0.99963204 0.654149443 0.908865553 0.034272804 0.07208337 2.109077161 0.035309485 0.009349805 2.73E-09 8.563654658 -0.345482597 (ac)SCINLPTVLPGS(ph)PSK ddPTM_A459_MK2206_30min_R1 2 SCINLPTVLPGSPSK 15 0 K7ERV3;P04183;K7ENW5;K7ES52;K7ERJ1 K7ERV3 TK1 "Thymidine kinase;Thymidine kinase, cytosolic" 1 SCINLPTVLPGS(0.793)PS(0.207)K;SCINLPT(0.001)VLPGS(0.762)PS(0.237)K 161.08 3.25E-09 88419000 21072.6 22940.4 24225.3 20593.8 18394.5 17170 20501.7 20618.4 20858.5 18612.5 TRUE FALSE 19280.26471 21446.97579 22580.95413 22179.93804 17661.80811 18142.15056 19134.069 20438.1355 23026.81572 20918.35702 0.921691159 1.025270568 1.079480292 1.060309757 0.844321 0.867283723 0.914702287 0.977043058 1.100794661 1 14.35248192 -1.662066967 19.59073481 0.976141672 0.030555916 0 0.085000932 0 0 0.021270804 0 0.02177374 1.662066967 -0.945585756 (ac)SCINLPTVLPGS(ph)PSK ddPTM_A459_MK2206_30min_R2 4 SCINLPTVLPGSPSK 15 0 K7ERV3;P04183;K7ENW5;K7ES52;K7ERJ1 K7ERV3 TK1 "Thymidine kinase;Thymidine kinase, cytosolic" 1 SCINLPTVLPGS(0.923)PS(0.077)K;SCINLPTVLPGS(0.735)PS(0.265)K;SCINLPTVLPGS(0.778)PS(0.222)K;SCINLPTVLPGS(0.994)PS(0.006)K 131.61 1.76E-05 177555600 150131 167690 165143 160627 174919 139730 187427 147100 141760 174755 TRUE FALSE 161625.1448 159362.7584 170648.7852 147503.2603 168050.8012 145047.5231 162817.6098 166326.4751 154090.0286 169052.7587 0.956063338 0.942680615 1.009440997 0.87252797 0.994073108 0.858001515 0.963117142 0.983873179 0.911490766 1 17.36711403 -10.72470739 4.30915511 1.000020342 0.944044718 0.113427401 0.047385359 63889818.75 0.651611663 12895.42476 0.010764946 1.88E-11 10.72470739 -0.055975624 (ac)SCINLPTVLPGS(ph)PSKTR ddPTM_A459_MK2206_30min_R1 1 SCINLPTVLPGSPSKTR 17 1 K7ERV3;P04183;K7ENW5;K7ES52;K7ERJ1 K7ERV3 TK1 "Thymidine kinase;Thymidine kinase, cytosolic" 1 SCINLPT(0.007)VLPGS(0.758)PS(0.193)KT(0.042)R 159.69 1.08E-08 19258000 1007.7 984.89 1088 1237.4 1597.2 878.28 720.61 1623.3 543.55 353.92 TRUE FALSE 921.9898234 920.773482 1014.149591 1332.704762 1533.580142 928.0074546 672.5394217 1609.107659 600.0539676 397.7662816 2.317918502 2.314860572 2.549611765 3.350471933 3.855480499 2.333047062 1.690790429 4.045359634 1.50855916 1 8.635777175 -8.489627422 11.99008409 1.000004336 2.782104656 0.445785935 0.703665723 1.012538677 363.6656161 0.691313973 0.178514003 3.24E-09 8.489627422 1.782100319 (ac)SCINLPTVLPGS(ph)PSKTR ddPTM_A459_MK2206_30min_R2 2 SCINLPTVLPGSPSKTR 17 1 K7ERV3;P04183;K7ENW5;K7ES52;K7ERJ1 K7ERV3 TK1 "Thymidine kinase;Thymidine kinase, cytosolic" 1 SCINLPT(0.055)VLPGS(0.755)PS(0.109)KT(0.081)R;SCINLPTVLPGS(0.701)PS(0.225)KT(0.073)R 79.92 0.0089563 4964700 11507.2 15740.9 11342.3 12742.5 20038.6 11630.4 16139.7 11831.9 19441.2 11189.6 TRUE FALSE 12388.20008 14959.2298 11720.44662 11701.39699 19251.78388 12073.00302 14020.538 13378.36995 21132.16043 10824.48427 1.144460999 1.381980834 1.082771828 1.081011963 1.77854052 1.115342101 1.295261525 1.235936015 1.952255637 1 13.40201067 (ac)SCINLPTVLPGSPSKT(ph)R ddPTM_A459_MK2206_30min_R1 1 SCINLPTVLPGSPSKTR 17 1 K7ERV3;P04183;K7ENW5;K7ES52;K7ERJ1 K7ERV3 TK1 "Thymidine kinase;Thymidine kinase, cytosolic" 1 SCINLPTVLPGS(0.174)PS(0.269)KT(0.557)R 127.2 2.00E-06 15030000 1420.9 1704.9 1596.2 2485.7 2614.1 1278.6 1053.4 3110.4 810.24 397.44 TRUE FALSE 1300.044994 1593.9107 1487.854391 2677.149045 2509.974862 1350.993227 983.129608 3083.206101 894.4673475 446.6778677 2.910475507 3.568367307 3.330933764 5.993466966 5.619205792 3.024535856 2.200981242 6.902527131 2.002488621 1 8.803090963 -8.509181684 24.37979451 0.999999351 4.165437237 0.36842675 1.439977694 469.4674623 835618.421 1.406908254 0.363262149 3.10E-09 8.509181684 3.165437887 (ac)SDAAVDT(ph)SSEITTK ddPTM_A459_MK2206_30min_R1 2 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 1 SDAAVDT(0.617)S(0.351)S(0.031)EIT(0.001)TK;SDAAVDT(0.671)S(0.284)S(0.043)EIT(0.002)T(0.001)K 121.76 0.00028025 19578000 5330.4 5621.2 5582.2 5040.6 5215.8 4916 5633.6 6083 4694.3 4268.42 TRUE FALSE 4877.021489 5255.258858 5203.295817 5428.827885 5008.043641 5194.339672 5257.792823 6029.816972 5182.289284 4797.224095 1.016634077 1.095479126 1.084647228 1.131660264 1.043946154 1.082780285 1.096007341 1.256938774 1.080268335 1 12.22798412 -7.538099264 24.99857382 1.136456723 1.079165053 0.02039546 0.066715074 489.7857829 804427.0817 0.029589998 0.017092408 2.90E-08 7.538099264 -0.05729167 (ac)SDAAVDTS(ph)SEITTK ddPTM_A459_MK2206_30min_R1 1 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 1 SDAAVDT(0.17)S(0.659)S(0.17)EIT(0.002)TK 88.092 0.0019183 10943000 2320.4 2037.2 2424.8 2091 2335.9 1782.4 1991.3 1857.2 2107.9 1723.6 TRUE FALSE 2123.037795 1904.57791 2260.211332 2252.049182 2242.856157 1883.317948 1858.46401 1840.962696 2327.023748 1937.132581 1.095969278 0.983194402 1.166781951 1.16256843 1.157822742 0.972219437 0.959389166 0.950354516 1.20127232 1 10.91970698 -6.764286923 24.99896558 1.009965622 1.111753068 0.251548562 0.082911443 109.8254189 964161.4668 0.029603929 0.027263887 1.72E-07 6.764286923 0.101787446 (ac)SDAAVDTS(ph)SEITTK ddPTM_A459_MK2206_30min_R2 1 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 1 SDAAVDT(0.164)S(0.759)S(0.077)EITTK 118.52 7.07E-05 29396000 68626 90203 80613 85109 84554 61384 89808 63206 66869 67641 TRUE FALSE 73880.05932 85723.65019 83300.59719 78155.32245 81233.98511 63720.01113 78016.10172 71467.24122 72685.14475 65433.87971 1.129079609 1.310080505 1.273049948 1.194416758 1.241466737 0.973807627 1.192289103 1.092205468 1.110818204 1 15.99775019 -6.729893128 24.99968851 1.086990968 1.234546092 0.53428921 0.072131806 160.5506482 127232.324 0.022964824 0.022962843 1.86E-07 6.729893128 0.147555125 (ac)SDAAVDTSSEITTK ddPTM_A459_MK2206_30min_R1 1 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 0 113.69 0.0007573 5185500 2707.7 2613.8 2746.6 2294.4 2472.4 2703.6 2527.7 2449.4 2181.4 2058.8 FALSE TRUE 2477.395896 2443.641145 2560.168444 2471.115086 2373.919073 2856.675496 2359.081745 2427.985154 2408.164336 2313.859687 1.070676805 1.056088733 1.106449306 1.067962374 1.025956365 1.234593226 1.019543993 1.049322553 1.040756425 1 11.17608567 (ac)SDEFS(ph)LADALPEHSPAK ddPTM_A459_MK2206_30min_R2 2 SDEFSLADALPEHSPAK 17 0 Q8NDC0 Q8NDC0 MAPK1IP1L MAPK-interacting and spindle-stabilizing protein-like 1 S(0.281)DEFS(0.699)LADALPEHS(0.02)PAK;S(0.286)DEFS(0.714)LADALPEHSPAK 97.734 6.42E-08 48187900 287262 339984 275294 272918 297809 233556 333594 244722 248506 332271 TRUE FALSE 309254.9996 323100.8889 284472.1646 250619.7264 286115.5223 242444.1372 289792.7071 276708.0057 270120.6027 321429.0245 0.962125309 1.005201349 0.885023265 0.779704716 0.890135926 0.754269586 0.90157604 0.860868138 0.840374024 1 18.29414068 -5.376614636 4.601212169 0.852386255 0.982747458 0.350925705 0.064747749 0.201944155 6.675773943 0.016000079 0.034985158 4.20E-06 5.376614636 0.130361203 (ac)SDEFSLADALPEHS(ph)PAK ddPTM_A459_MK2206_30min_R1 3 SDEFSLADALPEHSPAK 17 0 Q8NDC0 Q8NDC0 MAPK1IP1L MAPK-interacting and spindle-stabilizing protein-like 1 S(0.195)DEFS(0.149)LADALPEHS(0.656)PAK;S(0.007)DEFS(0.069)LADALPEHS(0.924)PAK;S(0.002)DEFSLADALPEHS(0.998)PAK 143.99 7.34E-198 125870000 5938.84 6181.92 6059.66 5301.13 4454.67 4155.7 4533.94 5059.38 4840.32 3839.43 TRUE FALSE 5433.710472 5779.475884 5648.347162 5709.423951 4277.231061 4390.992143 4231.489135 5015.146374 5343.488585 4315.087575 1.259235271 1.339364679 1.308976252 1.323130493 0.991226942 1.017590505 0.980626479 1.162235131 1.238326799 1 12.07517412 -6.252262221 24.72238965 1.066523484 1.310032948 0.694496735 0.078840473 353.0962939 951206.7715 0.025353238 0.032244071 5.59E-07 6.252262221 0.243509465 (ac)SDEFSLADALPEHS(ph)PAK ddPTM_A459_MK2206_30min_R2 5 SDEFSLADALPEHSPAK 17 0 Q8NDC0 Q8NDC0 MAPK1IP1L MAPK-interacting and spindle-stabilizing protein-like 1 SDEFS(0.003)LADALPEHS(0.997)PAK;S(0.001)DEFS(0.004)LADALPEHS(0.996)PAK;SDEFS(0.012)LADALPEHS(0.988)PAK;SDEFSLADALPEHS(1)PAK;SDEFS(0.002)LADALPEHS(0.998)PAK 114.3 6.02E-31 38899200 174901.6 166970 152453.1 158634.7 162706.9 141252.1 187085.2 140764.7 143773.5 196833.5 TRUE FALSE 188292.201 158678.5126 157535.8103 145673.7376 156318.2096 146627.5476 162520.6885 159163.1296 156278.6591 190410.839 0.988873333 0.833348109 0.827346863 0.765049607 0.820952265 0.770058829 0.853526455 0.835893221 0.820744554 1 17.53875608 -10.59173116 6.508775739 1.000000146 0.830986913 0.418893309 0.058090111 1.24E-07 1.78E-08 0.056468 0.01369549 2.56E-11 10.59173116 -0.169013233 (ac)SDKPDMAEIEKFDK ddPTM_A459_MK2206_30min_R2 2 SDKPDMAEIEKFDK 14 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 0 ; 73.887 0.0029635 36777000 163263 222390 234790 209136 217880 176415 229830 187571 167243 221420 FALSE TRUE 175762.5408 211346.436 242617.7814 192048.9198 209324.9364 183128.5964 199653.0449 212087.1737 181789.4938 214195.0835 0.820572246 0.986700687 1.132695379 0.896607507 0.97726303 0.854961717 0.932108439 0.990158925 0.848709928 1 17.70856584 (ac)SDSGEQNYGERES(ph)R ddPTM_A459_MK2206_30min_R1 3 SDSGEQNYGERESR 14 1 P62995 P62995 TRA2B Transformer-2 protein homolog beta 1 SDSGEQNYGERES(1)R;SDSGEQNYGERES(1)R;SDSGEQNYGERES(1)R 119.25 0.00037515 69568900 122.53 245.797 195.434 190.305 459.65 279.98 306.206 179.4 59.021 144.44 TRUE FALSE 112.1081801 229.7955706 182.1684846 204.9623241 441.3411672 295.8322256 285.7795564 177.8315247 65.15644416 162.3343177 0.690600618 1.41556988 1.122180986 1.26259393 2.718717604 1.822364056 1.760438338 1.095464762 0.401371966 1 7.342824209 -6.012571193 24.89203057 1.547938537 1.123783095 0.068325555 0.59862863 1547.611129 3064410.411 0.186604582 0.254021329 9.71E-07 6.012571193 -0.424155442 (ac)SDSGEQNYGERES(ph)R ddPTM_A459_MK2206_30min_R2 2 SDSGEQNYGERESR 14 1 P62995 P62995 TRA2B Transformer-2 protein homolog beta 1 SDSGEQNYGERES(1)R;SDSGEQNYGERES(1)R 138.02 2.03E-13 427410000 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)SDVEENNFEGRES(ph)R ddPTM_A459_MK2206_30min_R1 2 SDVEENNFEGRESR 14 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 1 SDVEENNFEGRES(1)R;SDVEENNFEGRES(1)R 111.72 0.00023883 17526700 647.18 584.54 646.9 538.93 787.59 828.91 783.56 571.71 396.45 512.93 TRUE FALSE 592.1339425 546.4863398 602.9902304 580.438482 756.2186226 875.8421679 731.2901421 566.7115997 437.6623962 576.4756408 1.027162122 0.947978199 1.045994293 1.006874256 1.311796317 1.51930473 1.268553414 0.983062526 0.759203625 1 9.171115837 -7.957888091 5.817193432 0.875767336 1.161086735 0.31600376 0.170942341 0.236417265 19.76993045 0.113024461 0.051990837 1.10E-08 7.957888091 0.285319399 (ac)SDVEENNFEGRES(ph)R ddPTM_A459_MK2206_30min_R2 2 SDVEENNFEGRESR 14 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 1 SDVEENNFEGRES(1)R;SDVEENNFEGRES(1)R 98 0.00051385 18805600 1756.09 3515.4 2139.64 1009.4 3753.2 2605.7 2625.55 3479.5 3115.31 1860.6 TRUE FALSE 1890.537601 3340.830348 2210.97453 926.9287911 3605.83051 2704.861739 2280.812131 3934.282597 3386.274033 1799.888774 1.050363571 1.856131554 1.228395088 0.514992262 2.003362964 1.502793827 1.267196153 2.185847622 1.881379606 1 10.81369204 -6.301028805 24.99936262 1.673878836 1.216725429 0.20983474 0.44627177 900.4053975 568572.749 0.140702132 0.159543197 5.00E-07 6.301028805 -0.457153407 (ac)SEET(ph)VPEAASPPPPQGQPYFDR ddPTM_A459_MK2206_30min_R2 2 SEETVPEAASPPPPQGQPYFDR 22 0 P35612;A0A1C7CYY0;P35612-5;P35612-6;P35612-4;P35612-3;C9J299;C9J080;C9JTM0;P35612-7;P35612-2;P35612-8 P35612 ADD2 Beta-adducin 1 S(0.434)EET(0.563)VPEAAS(0.003)PPPPQGQPYFDR;S(0.417)EET(0.575)VPEAAS(0.008)PPPPQGQPYFDR 117.08 1.77E-05 16738300 7007.9 9146.2 10479 9310.24 11067 9841.3 14410.6 7842.6 4465.2 7363.8 TRUE FALSE 7544.430212 8692.013008 10828.36463 8549.56361 10632.45397 10215.81757 12518.47091 8867.654748 4853.575025 7123.519809 1.059087419 1.220185139 1.520086266 1.200188087 1.49258432 1.434096885 1.757343455 1.244841733 0.681345059 1 12.79837455 -8.108875094 5.283170538 0.853353524 1.388936929 0.537256713 0.198044693 0.17467481 6.929517941 0.143103672 0.052142914 7.78E-09 8.108875094 0.535583405 (ac)SEETVPEAAS(ph)PPPPQGQPYFDR ddPTM_A459_MK2206_30min_R2 1 SEETVPEAASPPPPQGQPYFDR 22 0 P35612;A0A1C7CYY0;P35612-5;P35612-6;P35612-4;P35612-3;C9J299;C9J080;C9JTM0;P35612-7;P35612-2;P35612-8 P35612 ADD2 Beta-adducin 1 SEETVPEAAS(0.999)PPPPQGQPYFDR 59.983 0.00017866 2794100 2597.5 3167.7 4466.6 3366.1 4469.6 1514 4512 4891.8 3725.8 5110.8 TRUE FALSE 2796.366597 3010.396624 4615.514215 3091.078862 4294.101046 1571.616331 3919.56898 5531.175056 4049.863349 4944.035015 0.565604125 0.608894681 0.933552089 0.625213789 0.868541795 0.317881311 0.792787464 1.118757258 0.819141316 1 12.27147325 -7.52933148 21.78024265 0.972524704 0.662747307 0.419814246 0.171473071 34.26617602 115648.628 0.078636279 0.045644147 2.96E-08 7.52933148 -0.309777397 (ac)SET(ph)APAAPAAAPPAEK ddPTM_A459_MK2206_30min_R2 1 SETAPAAPAAAPPAEK 16 0 P16403 P16403 HIST1H1C Histone H1.2 1 S(0.43)ET(0.57)APAAPAAAPPAEK 49.929 0.00082929 13306000 42630 60420 61087 67593 58137 58229 79003 63199 57727 56600 TRUE FALSE 45893.78558 57419.63066 63123.61009 62070.43568 55854.24927 60444.9454 68629.8112 71459.32629 62747.99011 54753.14664 0.838194486 1.048700106 1.152876391 1.133641434 1.020110308 1.10395382 1.253440495 1.305118166 1.146016146 1 15.74065426 -4.134779439 1.090055313 1.154756298 6.67E-14 0.512597288 0.088097145 5.087504574 1.83487827 0.029319206 9.537793092 7.33E-05 4.134779439 -1.154756298 (ac)SET(ph)APLAPTIPAPAEK ddPTM_A459_MK2206_30min_R2 1 SETAPLAPTIPAPAEK 16 0 P16402 P16402 HIST1H1D Histone H1.3 1 S(0.396)ET(0.603)APLAPTIPAPAEK 67.118 0.0022168 5328200 31460 44894 44402 43089 39021 34192 54715 46078 49313 43284 TRUE FALSE 33868.60179 42664.62924 45882.34052 39568.49087 37488.83948 35493.20052 47530.85478 52100.55281 53602.1556 41871.64662 0.808867205 1.018938415 1.095785435 0.944994861 0.895327566 0.8476667 1.135156093 1.24429195 1.280153993 1 15.35368603 -7.419015657 5.20272219 1.195623687 0.945809533 0.539764473 0.10340541 0.174261396 7.049900498 0.045680742 0.030084624 3.81E-08 7.419015657 -0.249814154 (ac)SETAPAAPAAPAPAEKT(ph)PVK ddPTM_A459_MK2206_30min_R1 1 SETAPAAPAAPAPAEKTPVK 20 1 P10412 P10412 HIST1H1E Histone H1.4 1 S(0.01)ET(0.009)APAAPAAPAPAEKT(0.981)PVK 47.38 0.0067477 78980000 6558.6 7574.6 8287.6 6495.2 5468.7 5097.4 5313.3 6661.9 6229.2 4758.7 TRUE FALSE 6000.756629 7081.492163 7725.060803 6995.461429 5250.870099 5386.010383 4958.859452 6603.655711 6876.747631 5348.243682 1.122005089 1.324078068 1.444410775 1.307992277 0.981793353 1.007061515 0.927194 1.234733513 1.285795495 1 12.38484949 -6.245389527 23.1290775 1.073936143 1.31171061 0.42772159 0.128244614 315.6405221 454860.7147 0.040980052 0.052682247 5.68E-07 6.245389527 0.237774467 (ac)SETAPAAPAAPAPAEKT(ph)PVK ddPTM_A459_MK2206_30min_R2 2 SETAPAAPAAPAPAEKTPVK 20 1 P10412 P10412 HIST1H1E Histone H1.4 1 S(0.001)ET(0.001)APAAPAAPAPAEKT(0.998)PVK;SETAPAAPAAPAPAEKT(1)PVK 100.59 1.35E-09 111326000 84364 91613 95172 80415 95974 63812 130073 107366 91738 107065 TRUE FALSE 90822.9727 87063.63164 98344.98698 73844.83727 92205.57853 66240.41038 112994.2589 121399.1048 99717.20542 103571.4778 0.876911044 0.840613975 0.949537354 0.712984297 0.890260335 0.639562279 1.090978532 1.172128731 0.962786353 1 16.66026723 -7.289344966 24.90135976 1.070817517 0.823772892 0.582357614 0.098442131 479.3868725 427775.5216 0.039802319 0.026841056 5.14E-08 7.289344966 -0.247044625 (ac)SETAPAAPAAPAPAEKT(ph)PVKK ddPTM_A459_MK2206_30min_R1 5 SETAPAAPAAPAPAEKTPVKK 21 2 P10412 P10412 HIST1H1E Histone H1.4 1 S(0.052)ET(0.052)APAAPAAPAPAEKT(0.896)PVKK;S(0.004)ET(0.004)APAAPAAPAPAEKT(0.991)PVKK;S(0.026)ET(0.026)APAAPAAPAPAEKT(0.948)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK 76.796 7.57E-05 398228000 24443.5 24725 28312 22055.4 16871.8 15800.4 15639.7 21615.5 19400.7 15165.5 TRUE FALSE 22364.45197 23115.39801 26390.26032 23754.11073 16199.76048 16695.00499 14596.40415 21426.51796 21417.47219 17044.31663 1.312135444 1.356193886 1.548331968 1.393667534 0.950449398 0.979505682 0.856379547 1.257106308 1.256575588 1 14.05700314 -6.249090854 23.32885983 1.049652063 1.409679545 0.63376306 0.131260178 220.7884706 417112.8074 0.042510091 0.054399218 5.64E-07 6.249090854 0.360027483 (ac)SETAPAAPAAPAPAEKT(ph)PVKK ddPTM_A459_MK2206_30min_R2 4 SETAPAAPAAPAPAEKTPVKK 21 2 P10412 P10412 HIST1H1E Histone H1.4 1 S(0.002)ET(0.002)APAAPAAPAPAEKT(0.996)PVKK;S(0.003)ET(0.003)APAAPAAPAPAEKT(0.993)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;S(0.001)ET(0.001)APAAPAAPAPAEKT(0.999)PVKK 61.111 0.00034861 678906000 362439 404246 424226 352498 429025 237946 552530 454609 406035 433194 TRUE FALSE 390187.6085 384171.7315 438369.4831 323697.7858 412179.3228 247001.2018 479982.1473 514027.9572 441351.1904 419058.9153 0.931104421 0.916748737 1.046080795 0.772439803 0.983583233 0.589418797 1.145381067 1.226624559 1.053196041 1 18.67679356 (ac)SETAPAET(ph)ATPAPVEKSPAK ddPTM_A459_MK2206_30min_R1 2 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 1 S(0.427)ET(0.073)APAET(0.5)ATPAPVEKSPAK;S(0.253)ET(0.09)APAET(0.536)AT(0.005)PAPVEKS(0.116)PAK 103.01 1.53E-13 32235000 7367.4 9665.8 11139.4 8456.3 6090.2 4954 5841.4 8482.7 8095.5 5723.3 TRUE FALSE 6740.763942 9036.554663 10383.28856 9107.605691 5847.614438 5234.491199 5451.730864 8408.536648 8937.056195 6432.345613 1.047948035 1.404861493 1.614230514 1.41590739 0.909095187 0.813776422 0.847549431 1.307227123 1.389393035 1 12.65112921 -6.250456475 24.0885953 1.03848383 1.390566776 0.3510847 0.216515961 535.7734028 1175099.575 0.070911589 0.090568641 5.62E-07 6.250456475 0.352082947 (ac)SETAPAETATPAPVEKS(ph)PAK ddPTM_A459_MK2206_30min_R1 1 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 1 S(0.014)ET(0.001)APAET(0.001)AT(0.001)PAPVEKS(0.983)PAK 113.23 6.13E-15 503400000 4915.2 6068.1 6769 5434.3 3280 2986.3 3494 4446.5 4306.3 3263.2 TRUE FALSE 4497.136429 5673.065587 6309.53914 5852.850728 3149.350654 3155.381725 3260.921635 4407.624719 4753.955295 3667.469852 1.226223149 1.546860865 1.720406546 1.595882438 0.858725711 0.860370188 0.889147496 1.20181621 1.296249318 1 11.84056939 -6.254929021 24.98850107 1.01351303 1.538241911 0.661334088 0.176747155 340.1744067 1305680.142 0.057824447 0.07284696 5.56E-07 6.254929021 0.524728881 (ac)SETAPAETATPAPVEKS(ph)PAK ddPTM_A459_MK2206_30min_R2 4 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 1 S(0.004)ETAPAETAT(0.014)PAPVEKS(0.981)PAK;S(0.045)ET(0.003)APAET(0.015)AT(0.217)PAPVEKS(0.72)PAK;S(0.02)ET(0.002)APAET(0.001)AT(0.006)PAPVEKS(0.971)PAK;S(0.016)ET(0.002)APAET(0.002)AT(0.267)PAPVEKS(0.713)PAK 76.704 0.00087077 969341000 617200 658087 676148 569629 632118 378334 960630 847936 670534 698343 TRUE FALSE 664453.3065 625407.3565 698690.4369 523088.4885 607297.8712 392731.7655 834498.1271 958764.1466 728855.8353 675556.1251 0.983564921 0.925766688 1.03424484 0.774307965 0.898959907 0.581345873 1.235275791 1.419222047 1.078897531 1 19.36571611 -7.2997753 24.9322278 1.218284154 0.873993151 0.491260965 0.15630463 431.0041406 280307.0784 0.064928126 0.043775519 5.01E-08 7.2997753 -0.344291002 (ac)SETAPAETATPAPVEKS(ph)PAKK ddPTM_A459_MK2206_30min_R1 1 SETAPAETATPAPVEKSPAKK 21 2 P16401 P16401 HIST1H1B Histone H1.5 1 S(0.043)ET(0.002)APAET(0.004)AT(0.013)PAPVEKS(0.938)PAKK 75.483 0.0001105 189790000 6542.6 8296.2 8818.8 7201.4 4377.8 3827.9 4074.2 6734.9 5990.1 4055.3 TRUE FALSE 5986.117513 7756.115872 8220.204427 7756.053076 4203.422956 4044.63239 3802.417552 6676.017479 6612.792331 4557.70118 1.313407193 1.701760507 1.803585646 1.701746729 0.92226822 0.887428164 0.834284084 1.464777355 1.450905198 1 12.15409062 -6.25394232 24.80048129 1.093273931 1.647631916 0.554298618 0.235625176 431.4995803 1427411.294 0.077318977 0.097824356 5.57E-07 6.25394232 0.554357985 (ac)SETAPAETATPAPVEKS(ph)PAKK ddPTM_A459_MK2206_30min_R2 5 SETAPAETATPAPVEKSPAKK 21 2 P16401 P16401 HIST1H1B Histone H1.5 1 S(0.012)ET(0.001)APAET(0.008)AT(0.001)PAPVEKS(0.978)PAKK;S(0.01)ET(0.001)APAET(0.001)AT(0.003)PAPVEKS(0.984)PAKK;SETAPAETATPAPVEKS(1)PAKK;SETAPAET(0.002)AT(0.015)PAPVEKS(0.983)PAKK;S(0.004)ET(0.001)APAET(0.013)AT(0.002)PAPVEKS(0.981)PAKK 67.217 0.00044466 526746000 496060 597616 691474 527619 623470 350911 993578 762057 581832 699927 TRUE FALSE 534038.735 567939.2585 714527.398 484510.8399 598989.4351 364265.164 863120.0151 861660.4664 632438.6956 677088.4393 0.788728184 0.838796272 1.055294045 0.715579844 0.884654648 0.53798757 1.274752255 1.272596631 0.93405626 1 19.36898476 -7.278214619 24.99869534 1.143067676 0.816247554 0.488676558 0.157773229 708.5502476 1055887.25 0.065422127 0.044240325 5.27E-08 7.278214619 -0.326820122 (ac)SETAPLAPT(ph)IPAPAEKTPVKK ddPTM_A459_MK2206_30min_R1 1 SETAPLAPTIPAPAEKTPVKK 21 2 P16402 P16402 HIST1H1D Histone H1.3 1 S(0.006)ET(0.006)APLAPT(0.495)IPAPAEKT(0.493)PVKK 64.275 7.65E-05 326750000 9477.9 9469 10239 8488.7 6377.9 6135.1 6090.8 8586.8 7164.2 5181.9 TRUE FALSE 8671.754835 8852.566379 9544.005207 9142.501145 6123.854738 6482.46406 5684.493845 8511.726513 7908.944227 5823.872893 1.48900139 1.520048006 1.638772923 1.569831848 1.051508996 1.113084743 0.976067636 1.4615234 1.358021436 1 12.50776315 -6.25130514 24.65931958 1.171564721 1.557984565 0.631643025 0.14737503 422.5589023 1028198.166 0.046974857 0.059921084 5.61E-07 6.25130514 0.386419844 (ac)SETAPLAPTIPAPAEKT(ph)PVK ddPTM_A459_MK2206_30min_R1 4 SETAPLAPTIPAPAEKTPVK 20 1 P16402 P16402 HIST1H1D Histone H1.3 1 SETAPLAPT(0.005)IPAPAEKT(0.995)PVK;SETAPLAPT(0.114)IPAPAEKT(0.886)PVK;SETAPLAPTIPAPAEKT(1)PVK;SETAPLAPT(0.005)IPAPAEKT(0.995)PVK 95.123 2.87E-05 193924800 24759 27123.9 28999.2 22482 18282.6 17650.1 17000.1 22804.4 22291.9 16094.4 TRUE FALSE 22653.11704 25358.12918 27030.8151 24213.56754 17554.36533 18649.43341 15866.05435 22605.02354 24609.22278 18088.29578 1.252363258 1.401908145 1.494381529 1.338631778 0.970481992 1.031022139 0.877144787 1.249704439 1.360505328 1 14.14276887 -6.151735894 5.66361205 1.082004822 1.388756663 0.503577184 0.141447469 0.206532197 9.092565373 0.045251086 0.058898874 7.05E-07 6.151735894 0.306751842 (ac)SETAPLAPTIPAPAEKT(ph)PVK ddPTM_A459_MK2206_30min_R2 6 SETAPLAPTIPAPAEKTPVK 20 1 P16402 P16402 HIST1H1D Histone H1.3 1 S(0.021)ET(0.021)APLAPT(0.001)IPAPAEKT(0.958)PVK;S(0.016)ET(0.016)APLAPT(0.021)IPAPAEKT(0.947)PVK;S(0.018)ET(0.018)APLAPT(0.022)IPAPAEKT(0.943)PVK;S(0.006)ET(0.006)APLAPT(0.184)IPAPAEKT(0.805)PVK;S(0.002)ET(0.002)APLAPT(0.003)IPAPAEKT(0.992)PVK;S(0.031)ET(0.031)APLAPT(0.012)IPAPAEKT(0.926)PVK 84.113 1.22E-10 0 202478.6 252213.4 232036 200088.3 224430.9 157106 310063.1 253127.8 223291.8 246807 TRUE FALSE 217980.5173 239688.8493 239771.9644 183740.4458 215618.6152 163084.7789 269351.4425 286212.4726 242713.3171 238753.7078 0.912993223 1.003916762 1.004264883 0.769581539 0.903100593 0.683067 1.128156061 1.19877708 1.016584494 1 17.86516361 -7.302314088 24.99802328 1.102444247 0.886892465 0.474753277 0.105607512 459.0451498 280739.5907 0.045589879 0.03073706 4.99E-08 7.302314088 -0.215551783 (ac)SETAPLAPTIPAPAEKT(ph)PVKK ddPTM_A459_MK2206_30min_R1 1 SETAPLAPTIPAPAEKTPVKK 21 2 P16402 P16402 HIST1H1D Histone H1.3 1 S(0.001)ET(0.001)APLAPT(0.018)IPAPAEKT(0.981)PVKK 71.143 8.36E-05 273400000 8125.5 9891.8 9123.2 7869.6 6205.2 5854.6 5570.9 7448.1 6926 5156.1 TRUE FALSE 7434.383556 9247.842022 8503.942603 8475.717956 5958.033744 6186.082393 5199.275426 7382.982047 7645.982485 5794.876595 1.282923533 1.595865222 1.467493304 1.462622684 1.028155414 1.067508909 0.897219352 1.274053369 1.319438363 1 12.50056222 -6.254196691 24.29811479 1.09989539 1.463576662 0.618200091 0.136357755 267.1394259 896210.6094 0.042367933 0.053522816 5.57E-07 6.254196691 0.363681273 (ac)SETAPLAPTIPAPAEKT(ph)PVKK ddPTM_A459_MK2206_30min_R2 3 SETAPLAPTIPAPAEKTPVKK 21 2 P16402 P16402 HIST1H1D Histone H1.3 1 S(0.001)ET(0.001)APLAPT(0.01)IPAPAEKT(0.987)PVKK;SETAPLAPTIPAPAEKT(1)PVKK;SETAPLAPTIPAPAEKT(1)PVKK 74.222 7.72E-05 171107000 205792 245106 218271 207286 243707 145321 318403 257938 244771 256745 TRUE FALSE 221547.5937 232934.3925 225548.0462 190350.0707 234137.8387 150851.2925 276596.3036 291651.3822 266060.7391 248367.4317 0.89201548 0.937862065 0.908122473 0.766405118 0.942707492 0.607371472 1.113657704 1.174273858 1.071238436 1 17.92211648 -7.317503942 24.9970168 1.104315607 0.850843002 0.582510701 0.102153301 204.100775 90999.80511 0.04166589 0.028091148 4.81E-08 7.317503942 -0.253472606 (ac)SGAGVAAGTRPPS(ph)SPTPGSR ddPTM_A459_MK2206_30min_R1 1 SGAGVAAGTRPPSSPTPGSR 20 1 B8ZZB0;F5GZA4;E7ESC5;Q96AQ1-2;Q96LY2-2;Q96AQ1;Q96LY2;F8WCQ0;F8WB40;F8WEI8;C9JC78;E9PG54 B8ZZB0 CCDC74B;CCDC74A Coiled-coil domain-containing protein 74A;Coiled-coil domain-containing protein 74B 1 SGAGVAAGT(0.002)RPPS(0.362)S(0.362)PT(0.234)PGS(0.04)R 62.916 9.85E-09 3272800 566.37 538.98 503.28 412.32 711.22 415.77 522.55 347.04 373.72 439.73 TRUE FALSE 518.1972574 503.892304 469.1187558 444.0769578 682.8906014 439.3105381 487.6916429 344.0058659 412.5695314 494.2070722 1.04854278 1.019597518 0.949235214 0.898564555 1.381790427 0.888919975 0.986816398 0.696076372 0.834811063 1 8.948971846 -7.379048782 2.380626974 0.831252312 1.040592407 0.227747225 0.148302801 0.411862165 4.553967849 0.07492364 0.045084852 4.18E-08 7.379048782 0.209340095 (ac)SGDEMIFDPTMSK ddPTM_A459_MK2206_30min_R1 2 SGDEMIFDPTMSK 13 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 0 ; 82.029 0.0077785 4868300 4528.5 5162.9 4642.9 4294 5159.9 4585.2 4938.5 4652.4 4304.5 4338.2 FALSE TRUE 4143.327295 4826.794272 4327.752884 4624.724624 4954.370257 4844.810062 4609.061676 4611.724557 4751.968179 4875.648968 0.849800165 0.989979858 0.887626019 0.948535191 1.016145807 0.993674913 0.945322706 0.945868865 0.974632959 1 12.25137854 -4.145177467 2.300439488 0.964173939 1.49E-08 0.475069326 0.036003249 12.45004484 8.397063093 0.009802847 49.97919051 7.16E-05 4.145177467 -0.964173924 (ac)SGGSSCSQT(ph)PSR ddPTM_A459_MK2206_30min_R2 1 SGGSSCSQTPSR 12 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 SGGSSCSQT(0.538)PS(0.462)R 175.6 6.59E-12 2888500 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)SGGSSCSQTPS(ph)R ddPTM_A459_MK2206_30min_R2 1 SGGSSCSQTPSR 12 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 SGGSSCSQT(0.025)PS(0.975)R 211.83 1.83E-23 2499800 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)SGTS(ph)SPEAVKK ddPTM_A459_MK2206_30min_R2 1 SGTSSPEAVKK 11 1 A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;F8VZV1;F8VZV6;F8VQS2 A0A286YFF8 MON2 Protein MON2 homolog 1 S(0.023)GT(0.023)S(0.691)S(0.264)PEAVKK 66.595 0.031176 2599700 31978 43311 34539 36796 38222 35143 34379 31394 35166 32083 TRUE FALSE 34426.26027 41160.23872 35690.51302 33789.6491 36721.21223 36480.39149 29864.996 35497.30359 38224.67511 31036.13434 1.109231578 1.326203781 1.149966443 1.088719643 1.183176095 1.175416729 0.962265328 1.143741138 1.231618432 1 14.92166126 -5.508225104 24.05464075 1.117619123 1.222809555 0.170977821 0.09149374 659.8644468 1083194.475 0.023711796 0.046628416 3.10E-06 5.508225104 0.105190432 (ac)SGYSS(ph)DRDR ddPTM_A459_MK2206_30min_R2 1 SGYSSDRDR 9 1 P17844-2;P17844;J3QR02;J3KRX8;J3QRQ7;X6RLV5;J3QS79;J3QKN9 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 SGYS(0.134)S(0.866)DRDR 73.841 0.024552 513020000 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 (ac)SHPS(ph)PQAKPSNPSNPR ddPTM_A459_MK2206_30min_R2 1 SHPSPQAKPSNPSNPR 16 1 Q08752 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D 1 S(0.436)HPS(0.561)PQAKPS(0.001)NPS(0.002)NPR 78.69 0.0010766 0 2875.4 3051.8 2285.6 3596 3224.2 2738.8 2961.2 2543 2743.4 2091.8 TRUE FALSE 3095.542835 2900.25205 2361.800763 3302.195297 3097.601708 2843.026953 2572.390883 2875.378831 2982.015973 2023.544737 1.529762489 1.433253239 1.167160142 1.631886479 1.530779948 1.404973609 1.271230053 1.420961335 1.473659523 1 10.98266903 -10.95230503 2.910086724 0.990725835 1.425036628 0.511986685 0.125675613 16423935.15 19284164.29 1257582.6 0.03442285 1.12E-11 10.95230503 0.434310793 (ac)SKGPAVGIDLGT(ph)TYSCVGVFQHGK ddPTM_A459_MK2206_30min_R2 1 SKGPAVGIDLGTTYSCVGVFQHGK 24 1 P11142;E9PKE3;P11142-2;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PNE6;E9PI65;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 S(0.378)KGPAVGIDLGT(0.482)T(0.113)Y(0.025)S(0.002)CVGVFQHGK 57.826 3.97E-05 3147200 5012.1 6062 4877.6 6582.9 6314.5 4896.6 8451.1 4354.6 3810.8 6882.9 TRUE FALSE 5395.83023 5760.969895 5040.21675 6045.056012 6066.561002 5082.943544 7341.460418 4923.761172 4142.256496 6658.311537 0.810390172 0.86522985 0.756981214 0.907896241 0.911126037 0.763398275 1.102600919 0.739490957 0.622118156 1 12.70094066 -4.744491346 21.5689036 0.849625572 0.81038951 0.008608994 0.131885424 1531.724732 1948718.184 0.032367576 0.708302067 1.80E-05 4.744491346 -0.039236063 (ac)SKPHSEAGTAFIQTQQLHAAMADTFLEHMCR ddPTM_A459_MK2206_30min_R1 2 SKPHSEAGTAFIQTQQLHAAMADTFLEHMCR 31 1 P14618;B4DNK4;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;H3BN34;H3BQZ3;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 52.234 8.07E-12 42633000 8058.8 6539.9 8450 6596.1 9772 7840.8 8381.3 8233.8 6152.7 5332.6 FALSE TRUE 7373.356742 6114.151321 7876.437543 7104.132765 9382.760547 8284.73932 7822.19877 8161.812755 6792.295183 5993.242747 1.230278341 1.020174149 1.314219676 1.185357087 1.565556568 1.382346698 1.305169689 1.361835837 1.133325558 1 12.54912109 -5.282933198 24.03935626 1.305132134 1.12522625 0.126337925 0.1536626 704.7745111 788241.275 0.039091122 0.081517843 5.21E-06 5.282933198 -0.179905885 (ac)SLLDGLASS(ph)PR ddPTM_A459_MK2206_30min_R1 2 SLLDGLASSPR 11 0 E9PI10;E9PK87;F8W6N5;Q3YBR2 E9PI10 TBRG1 Transforming growth factor beta regulator 1 1 SLLDGLAS(0.098)S(0.902)PR;SLLDGLAS(0.261)S(0.739)PR 124.48 0.00052185 3900500 156.42 132.87 209.52 116.5 270.42 177.542 404.81 422.05 339.57 234.68 TRUE FALSE 143.1156576 124.2201388 195.2983662 125.4728502 259.6485988 187.5942746 377.8058635 418.3600613 374.8695167 263.7539301 0.542610522 0.470969812 0.740456705 0.475719357 0.984434995 0.711247315 1.432417948 1.586175649 1.421285046 1 8.043048781 -7.232852811 4.608447551 1.413074565 0.650255702 0.748989849 0.199318374 0.096154084 5.201895052 0.080761789 0.059294392 5.85E-08 7.232852811 -0.762818863 (ac)SLLDGLASS(ph)PR ddPTM_A459_MK2206_30min_R2 2 SLLDGLASSPR 11 0 E9PI10;E9PK87;F8W6N5;Q3YBR2 E9PI10 TBRG1 Transforming growth factor beta regulator 1 1 SLLDGLAS(0.151)S(0.849)PR;SLLDGLAS(0.215)S(0.785)PR 100.02 0.00084668 1292170 1562.31 1587.5 670 1276.69 694.23 410.39 978.91 510.12 1503.8 549.13 TRUE FALSE 1681.921655 1508.667058 692.3374656 1172.380343 666.971042 426.007679 850.3779411 576.7944355 1634.597806 531.2119331 3.166197049 2.840047379 1.303316854 2.20699173 1.255564871 0.801954272 1.600826126 1.085808506 3.077110479 1 9.053143745 -5.185313264 4.556031202 1.533310422 3.079956424 0.46093744 0.634246477 0.186541578 7.17438895 0.159618407 0.456299876 6.53E-06 5.185313264 1.546646002 (ac)SLYPS(ph)LEDLKVDK ddPTM_A459_MK2206_30min_R2 1 SLYPSLEDLKVDK 13 1 B4DHN5;E9PBU7;O00560-2;O00560 B4DHN5 SDCBP Syntenin-1 1 S(0.416)LY(0.123)PS(0.461)LEDLKVDK 88.163 0.0056737 1712400 9419.9 10095 8620.6 10299 11100 8881.9 13262 9997.1 10655 12993 TRUE FALSE 10141.09479 9593.69698 8908.006501 9457.538755 10664.15823 9219.906928 11520.68347 11303.7553 11581.75264 12569.03947 0.806831326 0.763280042 0.708726114 0.752447216 0.848446554 0.733541091 0.916592194 0.899333264 0.921450892 1 13.61758678 -7.638401737 0.751517483 0.986034544 0.75570061 0.763722976 0.04472674 0.314264567 0.335831602 0.040307635 0.020061304 2.30E-08 7.638401737 -0.230333934 (ac)SQGDS(ph)NPAAIPHAAEDIQGDDR ddPTM_A459_MK2206_30min_R1 1 SQGDSNPAAIPHAAEDIQGDDR 22 0 P68402-3;P68402-2;P68402-4;P68402 P68402-3 PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta 1 S(0.204)QGDS(0.796)NPAAIPHAAEDIQGDDR 106.3 9.81E-22 10003000 0 155.04 0 205 0 51.44 0 136.75 0 62.857 TRUE FALSE 0 144.9468678 0 220.7891355 0 54.35248835 0 135.5544092 0 70.64419971 0 2.051787244 0 3.125368203 0 0.769383595 0 1.918832823 0 1 6.142499207 (ac)SQPGQKPAAS(ph)PR ddPTM_A459_MK2206_30min_R1 4 SQPGQKPAASPR 12 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 SQPGQKPAAS(1)PR;SQPGQKPAAS(1)PR;SQPGQKPAAS(1)PR;SQPGQKPAAS(1)PR 126.5 0.00036264 252789000 10596.8 11910 10928.3 7998.8 9250.5 9869.2 12064.6 8816.9 11118.1 13484.3 TRUE FALSE 9695.486514 11134.65684 10186.51744 8614.868962 8882.032997 10427.98558 11259.79255 8739.814773 12273.86628 15154.83689 0.639761852 0.734726274 0.67216279 0.568456726 0.586085688 0.688096194 0.742983421 0.576701342 0.809897617 1 13.8874907 -8.542025504 4.060882799 0.999671494 0.654730745 0.778153309 0.058663092 0.089366324 4.738405828 0.059337009 0.015540728 2.87E-09 8.542025504 -0.344940749 (ac)SQPGQKPAAS(ph)PR ddPTM_A459_MK2206_30min_R2 4 SQPGQKPAASPR 12 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 SQPGQKPAAS(1)PR;SQPGQKPAAS(1)PR;SQPGQKPAAS(1)PR;SQPGQKPAAS(1)PR 103.14 0.0039884 271645000 140701 119849 136366 132367 112465 93495 155126 105066.5 110301 147337 TRUE FALSE 151473.1767 113897.4729 140912.3744 121552.1927 108049.059 97053.01774 134757.7699 118799.0523 119894.7816 142529.4058 1.062750356 0.799115609 0.988654753 0.852821858 0.758082576 0.680933294 0.945473456 0.833505561 0.841193303 1 17.12090007 (ac)SQPGQKPAAS(ph)PRPR ddPTM_A459_MK2206_30min_R1 5 SQPGQKPAASPRPR 14 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;S(0.002)QPGQKPAAS(0.998)PRPR 91.712 0.00047543 2818557300 17693.24 19317.43 18968.19 16483.33 18749.16 16797.13 17637.85 17764.66 14417.74 13062.1 TRUE FALSE 16188.33703 18059.8618 17680.68211 17752.87893 18002.34126 17748.16898 16461.26121 17609.34545 15916.51567 14680.33156 1.102722848 1.230208032 1.204378936 1.209296865 1.226289827 1.208976031 1.121313993 1.199519601 1.084206825 1 13.84159693 -8.556933833 1.03543621 0.998374168 1.196768673 0.678334158 0.041595537 0.331001716 0.77547662 0.038468678 0.012601303 2.77E-09 8.556933833 0.198394505 (ac)SQPGQKPAAS(ph)PRPR ddPTM_A459_MK2206_30min_R2 7 SQPGQKPAASPRPR 14 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 S(0.001)QPGQKPAAS(0.999)PRPR;SQPGQKPAAS(1)PRPR;S(0.004)QPGQKPAAS(0.996)PRPR;S(0.003)QPGQKPAAS(0.997)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR 86.498 0.0021754 4373720000 294357.3 379614.6 378493 436084.4 382550.4 359633.9 361458.8 285273.8 381179.6 338758.1 TRUE FALSE 316893.5212 360763.491 391111.7677 400454.9096 367529.5491 373320.0201 313998.8254 322560.0652 414333.9126 327704.4509 0.967010122 1.100880656 1.193489336 1.222000215 1.121527486 1.139197283 0.958176871 0.984301752 1.264352411 1 18.32203574 (ac)SQSGAVSCCPGATNGS(ph)LGR ddPTM_A459_MK2206_30min_R1 2 SQSGAVSCCPGATNGSLGR 19 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;E9PNY4;E9PM34;E9PN68;E9PLN2;E9PNT0;E9PLH1 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 SQSGAVSCCPGAT(0.022)NGS(0.978)LGR;SQSGAVSCCPGAT(0.061)NGS(0.939)LGR 148.52 9.43E-16 9873700 1061.53 534.99 652.79 812.02 815.02 1003.62 785.02 801.79 434.49 530.18 TRUE FALSE 971.2412992 500.1620538 608.4804336 874.5619211 782.5560276 1060.444097 732.6527481 794.7800346 479.6567903 595.8627011 1.629974988 0.839391445 1.02117557 1.467723889 1.313316014 1.779678599 1.229566386 1.333830819 0.804978713 1 9.218836132 -8.25435386 24.04215899 0.90248934 1.316494188 0.297776468 0.260269925 390.7825548 1325999.54 0.191579615 0.068777508 5.57E-09 8.25435386 0.414004849 (ac)SQSGAVSCCPGATNGS(ph)LGR ddPTM_A459_MK2206_30min_R2 2 SQSGAVSCCPGATNGSLGR 19 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;E9PNY4;E9PM34;E9PN68;E9PLN2;E9PNT0;E9PLH1 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 SQSGAVSCCPGAT(0.012)NGS(0.988)LGR;SQSGAVSCCPGAT(0.119)NGS(0.881)LGR 171.52 2.56E-38 7898000 2486.4 5219.7 3309 3813.51 4457.8 4886 4150.6 3085.53 2405.2 1980.17 TRUE FALSE 2676.760696 4960.497288 3419.320408 3501.934034 4282.764373 5071.940154 3605.621234 3488.819365 2614.399948 1915.557215 1.397379663 2.589584508 1.785026509 1.828154235 2.235779929 2.647762288 1.882283236 1.821307836 1.364824777 1 10.9035484 -8.298408783 1.59806291 1.012496241 2.085453202 0.498220379 0.354273319 0.29645675 1.472196963 0.328511029 0.098567317 5.03E-09 8.298408783 1.072956962 (ac)SS(ph)SPLSK ddPTM_A459_MK2206_30min_R2 1 SSSPLSK 7 0 P22314;Q5JRR9 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 S(0.027)S(0.724)S(0.247)PLS(0.002)K 51.059 0.047952 39834000 35265 33766 41309 48020 48633 39590 50323 38039 41914 48667 TRUE FALSE 37964.91551 32089.22954 42686.22144 44096.61239 46723.42406 41096.62519 43715.52965 43010.82791 45559.60396 47078.99978 0.806408711 0.681603893 0.906693465 0.936651428 0.992447254 0.872929021 0.928556891 0.913588396 0.967726676 1 15.52279605 -5.372040956 5.199959935 0.937909981 0.745421569 0.749519855 0.045515155 0.096361526 3.755697813 0.011461726 0.024631781 4.25E-06 5.372040956 -0.192488412 (ac)SSAPTT(ph)PPSVDKVDGFSR ddPTM_A459_MK2206_30min_R1 2 SSAPTTPPSVDKVDGFSR 18 1 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 S(0.02)S(0.02)APT(0.335)T(0.598)PPS(0.028)VDKVDGFSR;S(0.001)S(0.001)APT(0.012)T(0.978)PPS(0.007)VDKVDGFSR 90.259 0.00014272 48744000 7550.7 6735.3 7433.1 6490.8 7435.8 5789 7081.9 7584 6443.9 5176.5 TRUE FALSE 6908.473315 6296.830746 6928.561882 6990.722541 7139.61634 6116.768177 6609.479373 7517.693888 7113.766465 5817.803901 1.187470983 1.082338087 1.190923929 1.201608487 1.227201271 1.051387823 1.136078061 1.29218757 1.222758035 1 12.50625895 -10.72542969 5.26107884 0.999988833 1.175223175 0.38348824 0.067253131 9.33E-06 1.41E-06 0.068941885 0.016719797 1.88E-11 10.72542969 0.175234342 (ac)SSAPTT(ph)PPSVDKVDGFSR ddPTM_A459_MK2206_30min_R2 2 SSAPTTPPSVDKVDGFSR 18 1 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 S(0.025)S(0.025)APT(0.126)T(0.813)PPS(0.011)VDKVDGFSR;S(0.05)S(0.05)APT(0.1)T(0.765)PPS(0.033)VDKVDGFS(0.001)R 71.402 0.0018885 31840000 48908 60091 49269 56859 54574 47646 57096 42187 45306 49036 TRUE FALSE 52652.43408 57106.96832 50911.60387 52213.43782 52431.15055 49459.20192 49599.22662 47700.98575 49246.63399 47435.95934 1.109968784 1.203875059 1.073270249 1.10071428 1.105303894 1.042652085 1.045603953 1.005587036 1.038170929 1 15.5336935 -6.379036155 0.488906242 1.003332397 1.166610601 0.696320065 0.031686581 0.679002638 0.32284458 0.026446279 0.052643551 4.18E-07 6.379036155 0.163278204 (ac)SSDASQGVIT(ph)TPPPPSMPHK ddPTM_A459_MK2206_30min_R2 1 SSDASQGVITTPPPPSMPHK 20 0 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 S(0.176)S(0.176)DAS(0.176)QGVIT(0.236)T(0.236)PPPPSMPHK 51.211 2.59E-05 0 6459.9 8321 6332.6 7546.6 5844 6251.8 5002.7 4807.4 5624.2 6125 TRUE FALSE 6954.474911 7907.79124 6543.725723 6930.01864 5614.535196 6489.71663 4345.839481 5435.743686 6113.38275 5925.141752 1.173722959 1.334616381 1.10439986 1.169595417 0.947578207 1.09528462 0.73345747 0.917403146 1.031769873 1 12.53263395 -6.125638505 1.115267493 0.927463432 1.245674025 0.56858607 0.103169949 0.348510937 0.891772673 0.041751152 0.072539486 7.49E-07 6.125638505 0.318210593 (ac)SSDASQGVITT(ph)PPPPSMPHK ddPTM_A459_MK2206_30min_R1 2 SSDASQGVITTPPPPSMPHK 20 0 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 S(0.144)S(0.144)DAS(0.144)QGVIT(0.045)T(0.522)PPPPSMPHK;S(0.001)S(0.001)DAS(0.001)QGVIT(0.041)T(0.956)PPPPSMPHK 105.9 5.70E-14 24868000 3915.7 3887.1 3428.2 2726.4 3733.6 3153.6 3510.1 3515.1 2801.2 2533.7 TRUE FALSE 3582.649153 3634.049083 3195.503336 2936.3878 3584.882806 3332.154107 3275.947634 3484.367851 3092.394764 2847.593884 1.258132058 1.27618236 1.122176639 1.031182085 1.258916458 1.170164792 1.150426559 1.223618252 1.085967624 1 11.47552769 -14.52287875 0.142691079 0.390870402 1.235438549 0.389495485 0.072546137 162.9555301 1.407905043 28.17615856 0.44937564 3.00E-15 14.52287875 0.844568146 (ac)SSDASQGVITT(ph)PPPPSMPHK ddPTM_A459_MK2206_30min_R2 3 SSDASQGVITTPPPPSMPHK 20 0 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 SSDASQGVIT(0.04)T(0.959)PPPPSMPHK;S(0.001)S(0.001)DAS(0.002)QGVIT(0.013)T(0.984)PPPPSMPHK;S(0.093)S(0.093)DAS(0.093)QGVIT(0.168)T(0.548)PPPPS(0.005)MPHK 107.15 4.67E-14 32090000 84665 107244.9 85670.8 105717.9 86581.6 82760.8 88459.3 75719.9 84239.5 72327.6 TRUE FALSE 91147.0175 101919.2742 88527.02171 97080.4094 83181.97135 85910.32024 76844.48765 85616.75092 91566.49944 69967.55634 1.302704028 1.456664768 1.265258162 1.387506074 1.188864893 1.227859379 1.09828743 1.223663586 1.308699406 1 16.09439848 -6.269695507 23.72590835 1.184596705 1.35416586 0.478913051 0.090836837 276.8532724 795601.271 0.026868395 0.031025234 5.37E-07 6.269695507 0.169569155 (ac)SSIGTGYDLSASTFS(ph)PDGR ddPTM_A459_MK2206_30min_R1 1 SSIGTGYDLSASTFSPDGR 19 0 G3V3W4;G3V5N4;P25788-2;P25788 G3V3W4 PSMA3 Proteasome subunit alpha type-3 1 SSIGTGYDLSAS(0.037)T(0.012)FS(0.951)PDGR 145.88 2.54E-05 0 301.14 203.48 186.74 272.65 359.02 172.99 200.79 227.41 300.98 269.61 TRUE FALSE 275.5264617 190.233415 174.0646091 293.6495502 344.7194732 182.7845443 187.3956655 225.4217783 332.2679481 303.0113223 0.909294279 0.627809593 0.574449192 0.969104217 1.13764552 0.60322678 0.618444433 0.743938466 1.096552913 1 8.243227892 -8.258568054 24.78460289 1.048276475 0.7694139 0.28176483 0.175732885 292.7727825 2527211.011 0.141689667 0.048137173 5.51E-09 8.258568054 -0.278862575 (ac)SSILPFT(ph)PPIVKR ddPTM_A459_MK2206_30min_R1 1 SSILPFTPPIVKR 13 1 P84022 P84022 SMAD3 Mothers against decapentaplegic homolog 3 1 S(0.206)S(0.206)ILPFT(0.587)PPIVKR 78.705 0.011804 5223100 1885.2 1820.3 2410.6 2596.6 3008.2 1931.7 1514.8 2859.9 767.19 437.2 TRUE FALSE 1724.85384 1701.798139 2246.975188 2796.590582 2888.377024 2041.071185 1413.750456 2834.896196 846.9421459 491.3636367 3.510340838 3.463418967 4.572937475 5.691488692 5.878288112 4.1538914 2.877197966 5.769446463 1.72365654 1 8.940647285 -8.394991095 5.244930528 1.04638701 4.473054057 0.61696612 0.99134351 0.15110156 5.398550127 1.014313999 0.264016606 4.03E-09 8.394991095 3.426667047 (ac)SSPAS(ph)TPSR ddPTM_A459_MK2206_30min_R1 1 SSPASTPSR 9 0 A0A3B3ITP6;A0A3B3IT92;P33991;A0A3B3IS57;E5RFR3;E5RG53;A0A3B3IS88 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 S(0.3)S(0.3)PAS(0.395)T(0.005)PSR 93.667 0.0081281 856430 0 0 0 0 0 0 108.57 0 0 0 TRUE FALSE 0 0 0 0 0 0 101.3274934 0 0 0 0 (ac)SSS(ph)GTPDLPVLLTDLK ddPTM_A459_MK2206_30min_R2 1 SSSGTPDLPVLLTDLK 16 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 1 S(0.119)S(0.119)S(0.753)GT(0.008)PDLPVLLTDLK 151.98 2.43E-15 18215000 64238 85879 81313 82332 82280 71561 83074 67912 70241 83836 TRUE FALSE 69156.11067 81614.37374 84023.93484 75605.21223 79049.27378 74284.304 72166.28401 76788.33158 76350.43521 81100.43819 0.852721788 1.006337026 1.036047853 0.932241723 0.974708344 0.91595441 0.889838398 0.946830045 0.941430613 1 16.30742209 -6.753536967 24.80988112 0.932426802 0.965599824 0.029232969 0.052439867 445.4145695 1398389.912 0.017488684 0.017183751 1.76E-07 6.753536967 0.033173022 (ac)SSS(ph)PLSK ddPTM_A459_MK2206_30min_R1 3 SSSPLSK 7 0 P22314;Q5JRR9 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 S(0.021)S(0.111)S(0.85)PLS(0.017)K;S(0.006)S(0.046)S(0.902)PLS(0.047)K;S(0.007)S(0.116)S(0.871)PLS(0.006)K 78.264 0.0020124 89426300 38027.7 36703.3 35828.9 31194.8 33653 29013 34703.5 31616.3 30403.3 29080.1 TRUE FALSE 34793.24442 34313.9085 33396.93409 33597.4289 32312.52975 30655.69099 32388.49284 31339.88202 33563.83183 32682.76233 1.064574777 1.049908455 1.021851634 1.027986208 0.988671931 0.937977356 0.990996187 0.958911664 1.026958232 1 14.9962423 -5.87366065 1.35340079 0.979896965 1.055678827 0.587247885 0.023980551 0.300708259 1.115208236 0.00837782 0.01770379 1.34E-06 5.87366065 0.075781862 (ac)SSS(ph)PVNVK ddPTM_A459_MK2206_30min_R2 1 SSSPVNVK 8 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.207)S(0.207)S(0.586)PVNVK 65.305 0.012165 7581700 30777 44348 30304 29934 28834 26053 37470 27323 26984 31465 TRUE FALSE 33133.31078 42145.74281 31314.32024 27488.29645 27701.83228 27044.46517 32550.14399 30894.20991 29331.01954 30438.29963 1.088540135 1.384628686 1.028780208 0.903082524 0.91009789 0.888501181 1.069381154 1.014978179 0.963622144 1 14.89360015 -5.44060513 6.273316429 0.963867745 1.234141314 0.617697536 0.084449125 0.140813761 8.696827412 0.021878446 0.045903162 3.63E-06 5.44060513 0.270273569 (ac)SSSGT(ph)PDLPVLLTDLK ddPTM_A459_MK2206_30min_R1 4 SSSGTPDLPVLLTDLK 16 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 1 S(0.229)S(0.229)S(0.229)GT(0.312)PDLPVLLTDLK;SSSGT(0.999)PDLPVLLTDLK;S(0.156)S(0.156)S(0.156)GT(0.532)PDLPVLLTDLK;S(0.188)S(0.188)S(0.188)GT(0.436)PDLPVLLTDLK 154.6 5.03E-14 63371500 19095.1 21053.5 21286.9 17211.8 19366.6 17487.6 21523 21609.8 18192.8 18853.7 TRUE FALSE 17470.96147 19682.91332 19842.00454 18537.45582 18595.18731 18477.7328 20087.23994 21420.8678 20084.00666 21189.43869 0.824512708 0.928902063 0.936410106 0.874844119 0.87756866 0.872025591 0.94798358 1.010921908 0.94783099 1 14.37105775 -7.455707402 4.071833572 0.98433397 0.889487569 0.6535533 0.033185463 0.148831268 4.80187457 0.015290267 0.009624869 3.50E-08 7.455707402 -0.094846402 (ac)SSSGTPDLPVLLTDLK ddPTM_A459_MK2206_30min_R1 1 SSSGTPDLPVLLTDLK 16 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 0 99.671 0.0044369 12724000 1262.3 1476.1 1086 1356.7 1256.7 1017 1253.9 954.79 1038.3 1226.8 FALSE TRUE 1154.934756 1380.005622 1012.285346 1461.193269 1206.642978 1074.581661 1170.254619 946.4423717 1146.235001 1378.785246 0.837646588 1.000885109 0.734186378 1.059768571 0.875149325 0.779368407 0.848757718 0.686432042 0.831336863 1 10.42918205 -6.562442505 7.732858926 0.812216474 0.910304187 0.093739655 0.10987112 0.417879979 68.80896967 0.034284663 0.034422591 2.74E-07 6.562442505 0.098087713 (ac)STGPTAAT(ph)GSNRR ddPTM_A459_MK2206_30min_R2 2 STGPTAATGSNRR 13 1 Q15836 Q15836 VAMP3 Vesicle-associated membrane protein 3 1 STGPTAAT(0.5)GS(0.5)NRR;STGPTAAT(0.55)GS(0.45)NRR 96.059 0.0016502 16045900 8148 9558.3 6241.7 8397.9 6460.7 7474.6 6815.6 7846 11640.3 8536.8 TRUE FALSE 8771.817145 9083.648721 6449.795163 7711.764706 6207.020456 7759.051141 5920.703533 8871.499139 12652.75225 8258.244915 1.062189029 1.099949059 0.781012822 0.933826108 0.751614964 0.939552074 0.716944532 1.074259631 1.532135748 1 13.01161949 -8.002606106 24.79268463 1.278444519 0.898300862 0.437985175 0.167492978 72.28368682 687650.3563 0.090718592 0.042347339 9.94E-09 8.002606106 -0.380143657 (ac)STNENANT(ph)PAAR ddPTM_A459_MK2206_30min_R1 2 STNENANTPAAR 12 0 P52292;J3QLL0;J3KS65;J3QL07 P52292 KPNA2 Importin subunit alpha-1 1 STNENANT(1)PAAR;STNENANT(1)PAAR 168.98 0.00018448 1939230 0 0 68.916 0 283.33 0 195.08 71.669 0 0 TRUE FALSE 0 0 64.23817393 0 272.0443661 0 182.0665691 71.04240549 0 0 0 (ac)STNENANT(ph)PAAR ddPTM_A459_MK2206_30min_R2 2 STNENANTPAAR 12 0 P52292;J3QLL0;J3KS65;J3QL07 P52292 KPNA2 Importin subunit alpha-1 1 STNENANT(1)PAAR;STNENANT(1)PAAR 205.31 6.99E-17 22575000 0 0 0 0 0 421 0 0 0 0 TRUE FALSE 0 0 0 0 0 437.02145 0 0 0 0 0 (ac)STVHEILCK ddPTM_A459_MK2206_30min_R1 1 STVHEILCK 9 0 P07355;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YNP5;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 62.2 0.015064 8295100 6620.2 5544.4 6209 5238.1 7608.4 6753.5 6930.1 6533 4437.6 4567.4 FALSE TRUE 6057.117226 5183.458552 5787.550379 5641.53937 7305.341317 7135.877334 6467.805674 6475.88267 4898.9044 5133.243994 1.179978437 1.009782227 1.127464501 1.099020303 1.423143206 1.390130168 1.259984073 1.261557541 0.954348635 1 12.32565512 (ac)STVHEILCKLS(ph)LEGDHSTPPSAYGSVK ddPTM_A459_MK2206_30min_R2 1 STVHEILCKLSLEGDHSTPPSAYGSVK 27 1 P07355;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 S(0.227)T(0.227)VHEILCKLS(0.244)LEGDHS(0.244)T(0.057)PPSAYGSVK 40.428 0.0034989 46227000 6693.3 18537 13727 20826 19735 19273 24455 14378 18990 14026 TRUE FALSE 7205.744194 17616.47954 14184.65133 19124.44918 18960.10474 20006.44752 21244.02912 16257.25397 20641.71587 13568.33277 0.531070716 1.298352556 1.045423308 1.409491461 1.397379108 1.474495641 1.565706671 1.198176242 1.521315568 1 13.72795584 -4.591020039 1.64833571 1.361515842 7.12E-49 0.606143972 0.187931571 1.124791614 2.04342717 0.049837365 2.83660712 2.56E-05 4.591020039 -1.361515842 (ac)SVCTLSVPVS(ph)SLSPGRR ddPTM_A459_MK2206_30min_R2 3 SVCTLSVPVSSLSPGRR 17 1 P86452 P86452 ZBED6 Zinc finger BED domain-containing protein 6 1 SVCTLSVPVS(0.502)S(0.263)LS(0.235)PGRR;SVCTLSVPVS(0.333)S(0.333)LS(0.333)PGRR;SVCTLSVPVS(0.43)S(0.43)LS(0.141)PGRR 113.65 5.47E-08 10606400 4862.61 4502 6578.9 6120.7 8313.6 5559.1 4062.63 5418 3965.3 9049.5 TRUE FALSE 5234.89516 4278.437227 6798.237242 5620.619231 7987.166292 5770.655446 3529.201801 6126.151203 4310.194626 8754.215556 0.597985636 0.488728796 0.776567266 0.642047159 0.912379441 0.659185898 0.403143123 0.699794421 0.492356465 1 13.09576219 -11.31867632 2.473490327 1.113965964 0.635247372 0.381996779 0.14096292 24698048.13 16091148.04 16897025.26 0.036951828 4.80E-12 11.31867632 -0.478718593 (ac)SVNY(ph)AAGLSPYADKGK ddPTM_A459_MK2206_30min_R2 1 SVNYAAGLSPYADKGK 16 1 Q8N6T7-2;Q8N6T7;M0R0B2;M0QXA0 Q8N6T7-2 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 S(0.158)VNY(0.827)AAGLS(0.015)PYADKGK 87.001 0.0087717 0 9771.1 14285 13561 14075 13441 9356.3 13496 9442.2 10729 13189 TRUE FALSE 10519.18293 13575.62767 14013.11697 12925.02748 12913.2388 9712.360553 11723.95899 10676.32796 11662.18903 12758.64401 0.824474993 1.064033738 1.098323377 1.013040842 1.012116867 0.761237679 0.918903214 0.836791743 0.914061793 1 13.63918739 -6.714070206 24.50668398 0.878042399 1.011742938 0.295911341 0.08859302 109.2382402 56514.41196 0.02854253 0.028542435 1.93E-07 6.714070206 0.133700539 (ac)TECFLPPT(ph)SSPSEHRR ddPTM_A459_MK2206_30min_R2 1 TECFLPPTSSPSEHRR 16 1 J3QLT3;E7ENF8;A0A1W2PRI7;Q15311 J3QLT3 RALBP1 RalA-binding protein 1 1 TECFLPPT(0.373)S(0.342)S(0.236)PS(0.049)EHRR 50.493 0.025255 6862300 5438.9 3000 5995.4 5572.2 2640.5 4836.3 5369.2 2397.6 2721.3 9768.3 TRUE FALSE 5855.306366 2851.024362 6195.283644 5116.933435 2536.820703 5020.348785 4664.21759 2710.974552 2957.993755 9449.561171 0.619637913 0.30170971 0.655616016 0.541499583 0.268459102 0.531278511 0.49359092 0.286888936 0.313029748 1 13.20603162 -10.96240044 3.439347126 1.006546784 0.444534532 0.595108909 0.137148454 215011910.5 294045741.7 13660200.71 0.03519673 1.09E-11 10.96240044 -0.562012252 (ac)TECFLPPTS(ph)SPSEHR ddPTM_A459_MK2206_30min_R1 2 TECFLPPTSSPSEHR 15 0 J3QLT3;E7ENF8;A0A1W2PRI7;Q15311 J3QLT3 RALBP1 RalA-binding protein 1 1 TECFLPPT(0.011)S(0.492)S(0.492)PS(0.004)EHR;TECFLPPT(0.034)S(0.941)S(0.023)PS(0.002)EHR 135.02 2.44E-05 21123000 423.13 453.727 395.96 587.72 629.199 736 184.598 471.775 608.59 377.83 TRUE FALSE 387.1405716 424.1892898 369.0833384 632.9862962 604.1366715 777.671684 172.2838042 467.6503209 671.8551084 424.6384329 0.911694613 0.998942293 0.869170828 1.490647683 1.422708414 1.831373761 0.405718821 1.101290615 1.582181584 1 8.730091141 -5.742137786 24.98964471 1.26095229 0.93383643 0.149639372 0.366253605 515.9356764 667973.205 0.103529542 0.178972623 1.81E-06 5.742137786 -0.327115861 (ac)TECFLPPTSS(ph)PSEHR ddPTM_A459_MK2206_30min_R2 3 TECFLPPTSSPSEHR 15 0 J3QLT3;E7ENF8;A0A1W2PRI7;Q15311 J3QLT3 RALBP1 RalA-binding protein 1 1 TECFLPPT(0.028)S(0.181)S(0.687)PS(0.103)EHR;TECFLPPT(0.07)S(0.214)S(0.66)PS(0.056)EHR;TECFLPPT(0.006)S(0.193)S(0.776)PS(0.025)EHR 122.63 7.68E-05 33702000 2393.7 3635.99 1822.43 4266.9 2361.71 3077.35 3788.17 1055.6 1198.5 1005 TRUE FALSE 2576.963512 3455.432024 1883.188907 3918.280621 2268.977399 3194.460711 3290.778729 1193.570544 1302.743364 972.2069323 2.650632727 3.554214549 1.937024767 4.030294879 2.333842028 3.285782691 3.384854211 1.227691868 1.339985676 1 9.925119611 -7.768745884 24.87149195 1.212878212 3.02581143 0.678634367 0.578914893 87.96860075 299440.7227 0.286209155 0.141922102 1.70E-08 7.768745884 1.812933218 (ac)TECFLPPTSS(ph)PSEHRR ddPTM_A459_MK2206_30min_R1 1 TECFLPPTSSPSEHRR 16 1 J3QLT3;E7ENF8;A0A1W2PRI7;Q15311 J3QLT3 RALBP1 RalA-binding protein 1 1 TECFLPPT(0.011)S(0.245)S(0.737)PS(0.007)EHRR 70.944 0.010473 4000500 657.87 731.18 923.07 737.14 760.05 808.07 669.11 613.03 711.27 669.29 TRUE FALSE 601.9147019 683.5800491 860.4145802 793.9146505 729.7755991 853.8222251 624.4748928 607.6703433 785.2090618 752.2066981 0.80019854 0.908766235 1.14385392 1.055447462 0.970179607 1.135089899 0.83019055 0.807850216 1.043874063 1 9.554985343 -7.282905241 24.96207431 0.904466238 1.005402484 0.10006178 0.116014134 1698.206592 1974790.445 0.050218396 0.033888217 5.21E-08 7.282905241 0.100936246 (ac)TECFLPPTSS(ph)PSEHRR ddPTM_A459_MK2206_30min_R2 2 TECFLPPTSSPSEHRR 16 1 J3QLT3;E7ENF8;A0A1W2PRI7;Q15311 J3QLT3 RALBP1 RalA-binding protein 1 1 TECFLPPT(0.091)S(0.091)S(0.74)PS(0.077)EHRR;TECFLPPT(0.145)S(0.105)S(0.612)PS(0.138)EHRR 68.978 0.0075336 10414000 6083 4281.6 4145.4 3314 5583.6 5051 6396.8 4053.6 4929.3 2528.2 TRUE FALSE 6548.719157 4068.98197 4283.605567 3043.235599 5364.359809 5243.219344 5556.892476 4583.419438 5358.041604 2445.705041 2.677640618 1.663725552 1.751480859 1.244318325 2.193379708 2.143847789 2.272102475 1.87406877 2.19079632 1 11.25603471 (ac)TEVMMNTQPMEEIGLS(ph)PR ddPTM_A459_MK2206_30min_R1 6 TEVMMNTQPMEEIGLSPR 18 0 B5MBX5 B5MBX5 LBH 1 TEVMMNTQPMEEIGLS(1)PR;TEVMMNTQPMEEIGLS(1)PR;TEVMMNTQPMEEIGLS(1)PR;TEVMMNTQPMEEIGLS(1)PR;TEVMMNTQPMEEIGLS(1)PR;TEVMMNTQPMEEIGLS(1)PR 302.96 2.05E-206 65383200 60.809 0 0 231.543 262.576 150 222.133 68.631 128.704 0 TRUE FALSE 55.63687523 0 0 249.376482 252.1170419 158.4928704 207.3149129 68.0309664 142.0832414 0 0 (ac)TEVMMNTQPMEEIGLS(ph)PR ddPTM_A459_MK2206_30min_R2 4 TEVMMNTQPMEEIGLSPR 18 0 B5MBX5 B5MBX5 LBH 1 TEVMMNTQPMEEIGLS(1)PR;TEVMMNTQPMEEIGLS(1)PR;TEVMMNTQPMEEIGLS(1)PR;TEVMMNTQPMEEIGLS(1)PR 222.96 5.73E-43 8338900 0 0 428.66 485.39 0 0 520.97 1126.16 0 621.82 TRUE FALSE 0 0 442.9513105 445.7320843 0 0 452.5660132 1273.352979 0 601.5300643 0 0 0.736374351 0.740997185 0 0 0.752358095 2.116856753 0 1 9.232493035 -7.518527996 24.99320153 1.121978461 0.27757679 0.299754443 0.547443731 219.2447862 1259491.142 0.244355414 0.145557352 3.03E-08 7.518527996 -0.844401671 (ac)VDYSVWDHIEVS(ph)DDEDETHPNIDTASLFR ddPTM_A459_MK2206_30min_R1 2 VDYSVWDHIEVSDDEDETHPNIDTASLFR 29 0 Q16543;K7EQA9;K7EKQ2;K7EJ06 Q16543 CDC37 "Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed" 1 VDY(0.212)S(0.077)VWDHIEVS(0.711)DDEDETHPNIDTASLFR;VDY(0.024)S(0.028)VWDHIEVS(0.949)DDEDETHPNIDTASLFR 86.084 2.81E-13 16895100 123.26 190.191 114.9 153.05 264.89 204.06 62.083 145.99 258.37 66.809 TRUE FALSE 112.7760897 177.8095313 107.1009081 164.8379375 254.3388704 215.6137009 57.94155635 144.7136248 285.2284861 75.0858033 1.501962885 2.368084558 1.426380267 2.195327615 3.387309707 2.871564149 0.771671259 1.92731007 3.7987006 1 6.230468254 -5.982196117 23.48393168 2.337402257 1.823255763 0.059766454 0.921354388 395.3378498 521454.9669 0.265569888 0.393781281 1.04E-06 5.982196117 -0.514146494 AAAAAAGSGT(ph)PR ddPTM_A459_MK2206_30min_R2 1 AAAAAAGSGTPR 12 0 Q9NR33 Q9NR33 POLE4 DNA polymerase epsilon subunit 4 1 AAAAAAGS(0.007)GT(0.993)PR 100.09 0.032206 4813100 20790 23765 23585 26636 23685 27578 29195 19793 21328 21816 TRUE FALSE 22381.69838 22584.86466 24371.31213 24459.7536 22755.00789 28627.50011 25361.66143 22380.01306 23183.07089 21104.14571 1.060535626 1.070162468 1.154811593 1.159002309 1.078224545 1.356487039 1.201738359 1.060455769 1.098507905 1 14.36523881 -8.336943415 1.655403256 1.012579622 1.152697343 0.218989327 0.08446769 0.575152877 3.138863254 0.085171587 0.025203821 4.60E-09 8.336943415 0.140117722 AAAAAASSSCSSGSCS(ph)SGSSPSLK ddPTM_A459_MK2206_30min_R1 1 AAAAAASSSCSSGSCSSGSSPSLK 24 0 A0A3B3IRW6 A0A3B3IRW6 1 AAAAAASS(0.001)S(0.001)CS(0.003)S(0.017)GS(0.075)CS(0.47)S(0.406)GS(0.012)S(0.012)PS(0.003)LK 73.405 0.00043787 2136400 710 686.57 660.59 830.59 652.46 549.87 540.46 672.36 772.74 662.99 TRUE FALSE 649.6107716 641.8741682 615.7509913 894.5621857 626.4711366 581.0031642 504.4068995 666.4816274 853.0690883 745.1262065 0.871813078 0.861430134 0.826371407 1.200551233 0.840758426 0.779737928 0.676941564 0.894454686 1.144865233 1 9.541340994 -8.174443563 6.362066404 1.070647772 0.866942064 0.283516811 0.129706991 0.305270579 18.01994745 0.096030174 0.035372611 6.69E-09 8.174443563 -0.203705709 AAAAAATAPPS(ph)PGPAQPGPR ddPTM_A459_MK2206_30min_R1 2 AAAAAATAPPSPGPAQPGPR 20 0 Q6SPF0 Q6SPF0 SAMD1 Atherin 1 AAAAAATAPPS(1)PGPAQPGPR;AAAAAAT(0.067)APPS(0.933)PGPAQPGPR 220.78 1.40E-19 98229000 8286.9 7473.8 7411 6623.4 6778.6 6650 6893.4 6603.6 5570.6 5280.1 TRUE FALSE 7582.055639 6987.254262 6907.961968 7133.535416 6508.594008 7026.517253 6433.553864 6545.865421 6149.683805 5934.238651 1.277679595 1.177447466 1.164085635 1.202097832 1.096786697 1.184063815 1.084141411 1.103067437 1.036305441 1 12.53484723 -1.522878745 0.10521273 0.915756828 1.90342187 0.80410196 0.035099225 49.06779645 0.364433787 0.363464661 7.011274423 0.03 1.522878745 0.987665041 AAAAAATAPPS(ph)PGPAQPGPR ddPTM_A459_MK2206_30min_R2 3 AAAAAATAPPSPGPAQPGPR 20 0 Q6SPF0 Q6SPF0 SAMD1 Atherin 1 AAAAAAT(0.004)APPS(0.996)PGPAQPGPR;AAAAAATAPPS(1)PGPAQPGPR;AAAAAATAPPS(1)PGPAQPGPR 224.4 4.36E-20 341021400 164705 191329 183787 196037 190908 189420 195972 140841 165218 166782 TRUE FALSE 177314.9414 181827.8801 189914.3669 180020.15 183411.9927 196628.5108 170240.641 159249.4023 179588.363 161339.917 1.099014706 1.126986325 1.177107131 1.115781843 1.136804804 1.218722028 1.055167526 0.987042793 1.113105587 1 17.29974389 -7.437845279 7.678339796 1.034322131 1.144316918 0.587872191 0.044117037 0.199563385 16.04028472 0.018023376 0.012079155 3.65E-08 7.437845279 0.109994788 AAAAALS(ph)GSPPQTEKPTHYR ddPTM_A459_MK2206_30min_R1 1 AAAAALSGSPPQTEKPTHYR 20 1 E9PDK2;A0A0A0MRZ1;Q9H9P5-5;Q9H9P5;Q9H9P5-6 E9PDK2 UNKL Putative E3 ubiquitin-protein ligase UNKL 1 AAAAALS(0.5)GS(0.5)PPQT(0.001)EKPTHYR 82.877 0.026904 0 1583.5 1665.7 1643 1675.3 1647.3 1293.9 1622.3 1758.9 1455 1354.4 TRUE FALSE 1448.81501 1557.262627 1531.477738 1804.331896 1581.684553 1367.1595 1514.079327 1743.522123 1606.252457 1522.193297 0.95179437 1.023038684 1.006099383 1.185350047 1.039082589 0.898151045 0.994669553 1.145401261 1.055222395 1 10.57193586 -7.721158534 24.99995 1.075234482 1.017164559 0.086695887 0.076714616 366.5605703 227502.1042 0.038485597 0.02221927 1.90E-08 7.721158534 -0.058069923 AAAAGLGHPAS(ph)PGGSEDGPPGSEEEDAAR ddPTM_A459_MK2206_30min_R2 2 AAAAGLGHPASPGGSEDGPPGSEEEDAAR 29 0 Q99856 Q99856 ARID3A AT-rich interactive domain-containing protein 3A 1 AAAAGLGHPAS(1)PGGSEDGPPGSEEEDAAR;AAAAGLGHPAS(0.966)PGGS(0.034)EDGPPGSEEEDAAR 134.69 5.63E-14 17279200 50857 62324 54221 63907 61689 59556 56986 46275 50139 56039 TRUE FALSE 54750.65102 59229.08079 56028.70108 58685.59367 59266.7799 61822.44531 49503.66975 52323.30139 54499.99959 54210.45202 1.00996485 1.092576774 1.033540563 1.08255127 1.093272195 1.140415603 0.913175742 0.965188436 1.005341176 1 15.72628342 -7.264737149 24.99868148 0.968025376 1.075404753 0.61522508 0.040445002 194.789589 1476584.521 0.016573678 0.011704775 5.44E-08 7.264737149 0.107379377 AAAAPGAS(ph)PSPGGDAAWSEAGPGPR ddPTM_A459_MK2206_30min_R1 3 AAAAPGASPSPGGDAAWSEAGPGPR 25 0 P52701-2;P52701;P52701-3;F8WAX8;F8W7G9 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 AAAAPGAS(0.931)PS(0.069)PGGDAAWSEAGPGPR;AAAAPGAS(0.959)PS(0.041)PGGDAAWSEAGPGPR;AAAAPGAS(0.95)PS(0.05)PGGDAAWSEAGPGPR 273.8 6.02E-74 18531200 5247.4 5062.6 5560.6 3862.98 4813 5179.6 5758.1 3890.54 6338.2 7391.2 TRUE FALSE 4801.081075 4733.02382 5183.161965 4160.507389 4621.288018 5472.864476 5373.987655 3856.525419 6997.078571 8306.877657 0.577964582 0.569771702 0.623960311 0.500850929 0.556320703 0.658835329 0.646932323 0.464256918 0.842323537 1 13.02009059 -8.463982291 4.270517564 0.998097652 0.579461373 0.856748337 0.058274035 0.064805549 2.370264266 0.056371063 0.014749582 3.44E-09 8.463982291 -0.418636278 AAAAPGAS(ph)PSPGGDAAWSEAGPGPR ddPTM_A459_MK2206_30min_R2 4 AAAAPGASPSPGGDAAWSEAGPGPR 25 0 P52701-2;P52701;P52701-3;F8WAX8;F8W7G9 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 AAAAPGAS(0.849)PS(0.151)PGGDAAWSEAGPGPR;AAAAPGAS(0.968)PS(0.032)PGGDAAWSEAGPGPR;AAAAPGAS(0.998)PS(0.002)PGGDAAWSEAGPGPR;AAAAPGAS(0.989)PS(0.011)PGGDAAWSEAGPGPR 250.64 8.15E-53 44054900 206203 166200 169841 187970 153239 157780 208026 164530 127393 215214 TRUE FALSE 221990.0602 157946.7497 175503.4142 172612.2497 147222.0669 163784.4285 180711.9363 186034.6359 138473.4129 208191.5848 1.066277777 0.758660586 0.842989952 0.829102914 0.707147059 0.786700522 0.868007881 0.893574234 0.665124928 1 17.66755223 -4.754053525 24.99426858 0.81192021 1.066278226 0.40360241 0.090800163 253.2331922 856887.4141 0.021306904 0.216168178 1.76E-05 4.754053525 0.254358017 AAAAPGASPS(ph)PGGDAAWSEAGPGPRPLAR ddPTM_A459_MK2206_30min_R1 2 AAAAPGASPSPGGDAAWSEAGPGPRPLAR 29 1 P52701-2;P52701;P52701-3;F8WAX8;F8W7G9 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 AAAAPGAS(0.049)PS(0.946)PGGDAAWS(0.005)EAGPGPRPLAR;AAAAPGAS(0.028)PS(0.972)PGGDAAWSEAGPGPRPLAR 133.74 4.91E-14 298590000 5824.5 4577.8 4969.8 4713.8 6044.4 4545.2 5078.6 5061.7 3889.7 3635.6 TRUE FALSE 5329.095689 4279.784388 4632.463823 5076.857693 5803.638749 4802.545296 4739.81586 5017.446091 4294.048234 4086.005575 1.304231135 1.047425 1.133738987 1.242498964 1.420369758 1.175364352 1.160012088 1.227958699 1.050915902 1 11.99647546 -8.362956714 3.626143486 1.002439741 1.210802834 0.388139642 0.095313652 0.26094092 5.937186769 0.096183706 0.025719688 4.34E-09 8.362956714 0.208363093 AAAAPGASPS(ph)PGGDAAWSEAGPGPRPLAR ddPTM_A459_MK2206_30min_R2 4 AAAAPGASPSPGGDAAWSEAGPGPRPLAR 29 1 P52701-2;P52701;P52701-3;F8WAX8;F8W7G9 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 AAAAPGAS(0.07)PS(0.93)PGGDAAWSEAGPGPRPLAR;AAAAPGAS(0.209)PS(0.791)PGGDAAWSEAGPGPRPLAR;AAAAPGAS(0.072)PS(0.928)PGGDAAWSEAGPGPRPLAR;AAAAPGAS(0.073)PS(0.926)PGGDAAWSEAGPGPRPLAR 102.16 2.64E-08 305986000 133140 190154 154370 200228 218215 211825 205588 136375 192241 185895 TRUE FALSE 143333.3008 180711.2289 159516.6188 183868.7319 209646.7827 219886.1488 178594.0486 154199.6807 208961.7747 179829.2614 0.797052158 1.004904472 0.887044842 1.02246281 1.165810175 1.222749552 0.993131192 0.857478252 1.162000962 1 17.45626827 -4.719710281 0.903837901 1.058067256 0.678153022 0.319022008 0.109763064 3.329293795 1.973596432 0.041374744 1.287959522 1.91E-05 4.719710281 -0.379914235 AAAGAQASQAQLGEAAGPASETPAGTES(ph)PHSSASPCQEHK ddPTM_A459_MK2206_30min_R2 1 AAAGAQASQAQLGEAAGPASETPAGTESPHSSASPCQEHK 40 0 Q9Y261;Q9Y261-2 Q9Y261 FOXA2 Hepatocyte nuclear factor 3-beta 1 AAAGAQASQAQLGEAAGPAS(0.036)ET(0.036)PAGT(0.133)ES(0.371)PHS(0.18)S(0.18)AS(0.065)PCQEHK 90.164 5.57E-12 11434000 6494.5 22628 15047 37259 36657 44486 38375 21533 31513 22337 TRUE FALSE 6991.723913 21504.32642 15548.65947 34214.82051 35217.66199 46178.9459 33336.3164 24347.43703 34253.94378 21608.14552 0.323568902 0.995195372 0.719573989 1.583422348 1.629832693 2.137108243 1.542766193 1.126771245 1.585232927 1 14.39928764 -5.759781737 24.81681362 1.552161702 0.711020783 0.576644791 0.326671301 28.68550188 429437.2394 0.092176084 0.149509366 1.74E-06 5.759781737 -0.841140919 AAAGEEETAAAGS(ph)PGR ddPTM_A459_MK2206_30min_R1 1 AAAGEEETAAAGSPGR 16 0 Q9NS37;E9PIM0 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 AAAGEEETAAAGS(1)PGR 238.65 2.34E-21 11872000 927.68 842.8 1091.3 691.88 925.75 911.6 962.79 945.11 790.72 839.65 TRUE FALSE 848.7759446 787.9335668 1017.225597 745.1687175 888.8754172 963.2140042 898.5640358 936.8470029 872.9181736 943.672181 0.899439405 0.834965344 1.077943821 0.789647859 0.941932416 1.020708275 0.952199348 0.992767427 0.925022684 1 9.882141964 -6.520956206 24.98121415 0.976650045 0.903154922 0.198007216 0.073558123 127.01579 1650458.157 0.023194764 0.023531625 3.01E-07 6.520956206 -0.073495124 AAAGEEETAAAGS(ph)PGR ddPTM_A459_MK2206_30min_R2 1 AAAGEEETAAAGSPGR 16 0 Q9NS37;E9PIM0 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 AAAGEEETAAAGS(1)PGR 97.45 0.0076161 6170500 9230.4 9790.4 8871.1 10741 11668 13162 13447 10349 8883.4 10931 TRUE FALSE 9937.086521 9304.222973 9166.858046 9863.425941 11209.85569 13662.88913 11681.39275 11701.64983 9656.062074 10574.32237 0.93973743 0.879888342 0.866897918 0.932771444 1.060101565 1.292081768 1.104694215 1.106609902 0.913161311 1 13.36827759 -6.253927671 3.708317751 1.098796077 0.896287079 0.459376548 0.092470428 0.199962342 6.141713605 0.029990037 0.03723654 5.57E-07 6.253927671 -0.202508998 AAAGEEETAAAGS(ph)PGRK ddPTM_A459_MK2206_30min_R1 2 AAAGEEETAAAGSPGRK 17 1 Q9NS37;E9PIM0 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 AAAGEEETAAAGS(1)PGRK;AAAGEEETAAAGS(1)PGRK 129.98 0.00046017 27234000 3218.85 3641.1 3820.27 3342.85 3680.4 3828.6 4037.3 4326.7 3588 3481.7 TRUE FALSE 2945.069905 3404.063728 3560.960716 3600.316886 3533.801875 4045.372023 3767.979083 4288.872118 3960.98544 3913.039281 0.752629783 0.86992833 0.91002427 0.920081969 0.90308367 1.033818404 0.962929021 1.096046272 1.01225292 1 11.93407388 -3.390870505 0.329549245 1.042768739 0.146997484 0.787177966 0.042483297 7.596199186 0.322624644 0.040359634 3.250873659 0.000406565 3.390870505 -0.895771255 AAAGEEETAAAGS(ph)PGRK ddPTM_A459_MK2206_30min_R2 1 AAAGEEETAAAGSPGRK 17 1 Q9NS37;E9PIM0 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 AAAGEEETAAAGS(1)PGRK 70.907 0.015871 12427000 17574 17265 17213 23610 21115 20652 22054 15062 21262 21367 TRUE FALSE 18919.47895 16407.64521 17786.87283 21680.98748 20285.91901 21437.92633 19158.28331 17030.65512 23111.33033 20669.79654 0.915320038 0.793798099 0.860524814 1.048921185 0.981428093 1.037161943 0.926873338 0.823939175 1.118120843 1 14.33523657 -5.679275233 7.828705815 0.982293282 0.848644137 0.375904644 0.078669174 0.263402658 21.74858564 0.021298585 0.036955269 2.09E-06 5.679275233 -0.133649145 AAAGVGGS(ph)LR ddPTM_A459_MK2206_30min_R2 1 AAAGVGGSLR 10 0 Q9BRK4 Q9BRK4 LZTS2 Leucine zipper putative tumor suppressor 2 1 AAAGVGGS(1)LR 86.189 0.035409 18826000 37997 63001 47802 65526 51802 53924 49011 33328 48174 46518 TRUE FALSE 40906.07953 59872.46195 49395.69482 60172.31619 49767.9932 55976.11561 42575.79683 37684.08403 52364.08744 45000.12147 0.909021536 1.330495563 1.097679144 1.337158973 1.105952419 1.243910322 0.946126264 0.837421829 1.163643247 1 15.45764128 -7.267913356 24.70710787 0.973249642 1.17927 0.292822637 0.138994039 501.3557366 1913351.62 0.053664778 0.037172062 5.40E-08 7.267913356 0.206020358 AAALPEET(ph)RS(ph)S(ph)RRR ddPTM_A459_MK2206_30min_R1 1 AAALPEETRSSRRR 14 3 H3BS19;Q96JG9 H3BS19 ZNF469 Zinc finger protein 469 3 AAALPEET(1)RS(1)S(1)RRR 130.41 0.013363 5191200 1139.5 636.6 1051.3 869.93 1280.9 1105.2 1219.5 1012.6 658.81 516.03 TRUE FALSE 1042.579541 595.1572243 979.9406851 936.9321593 1229.879041 1167.775469 1138.14938 1003.746945 727.2956571 579.9596922 1.797675865 1.026204463 1.689670331 1.615512547 2.12062848 2.013545915 1.962462901 1.730718459 1.254045181 1 9.179808825 -5.490870283 23.99301476 1.739356973 1.398439279 0.053060282 0.369575532 815.257542 611100.8013 0.094781333 0.196943374 3.23E-06 5.490870283 -0.340917694 AAAPPQPS(ph)PPPTK ddPTM_A459_MK2206_30min_R1 1 AAAPPQPSPPPTK 13 0 J3KR72;P49848-4;P49848-2;P49848;P49848-3 J3KR72 TAF6 Transcription initiation factor TFIID subunit 6 1 AAAPPQPS(0.983)PPPT(0.017)K 91.712 0.023467 0 4155.9 4573.6 4204.5 3543.3 3517.5 3057.4 3441.8 3205 3081.5 2732.8 TRUE FALSE 3802.418881 4275.857809 3919.110254 3816.20558 3377.390527 3230.507346 3212.203802 3176.979023 3401.832952 3071.359896 1.238024527 1.39217088 1.276017916 1.24251332 1.099640108 1.051816608 1.045857181 1.034388392 1.107598285 1 11.58466186 -6.202271028 1.769111109 1.048241945 1.314567871 0.875389928 0.043450131 0.109187121 0.674781079 0.014426658 0.020058698 6.28E-07 6.202271028 0.266325926 AAAPPQPS(ph)PPPTK ddPTM_A459_MK2206_30min_R2 2 AAAPPQPSPPPTK 13 0 J3KR72;P49848-4;P49848-2;P49848;P49848-3 J3KR72 TAF6 Transcription initiation factor TFIID subunit 6 1 AAAPPQPS(0.931)PPPT(0.069)K;AAAPPQPS(0.971)PPPT(0.029)K 81.703 0.034523 33000000 89095 97557 81716 82414 76633 76464 79221 56236 58045 64054 TRUE FALSE 95916.1817 92712.46124 84440.37066 75680.51257 73624.00337 79373.8911 68819.18754 63586.23829 63093.64918 61963.92323 1.547935907 1.496232911 1.362734415 1.22136412 1.188175305 1.280969425 1.110633155 1.026181607 1.018231995 1 15.91914087 -3.844748329 0.260923913 0.960992964 2.470114082 0.92806187 0.049985078 4.050611608 0.157060021 0.072139489 2.130616488 0.000142972 3.844748329 1.509121119 AAASPPT(ph)PIR ddPTM_A459_MK2206_30min_R2 1 AAASPPTPIR 10 0 Q6PGN9-4;Q5T2Z1;Q6PGN9-2 Q6PGN9-4 PSRC1 1 AAAS(0.042)PPT(0.958)PIR 99.568 0.042925 4708600 43068 45373 48107 64461 48961 60703 59725 48839 53950 49007 TRUE FALSE 46365.31919 43119.8428 49710.86337 59194.3301 47038.54513 63013.0952 51883.03576 55222.42499 58642.47348 47407.9056 0.978008174 0.909549626 1.048577505 1.248617279 0.992208884 1.329168509 1.094396285 1.164835786 1.236976676 1 15.53284004 -5.523163475 5.159262308 1.157575337 0.949578049 0.405523212 0.101417836 0.150412416 12.2424807 0.02559219 0.049132158 3.00E-06 5.523163475 -0.207997288 AAAT(ph)PESQEPQAK ddPTM_A459_MK2206_30min_R1 4 AAATPESQEPQAK 13 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 AAAT(0.967)PES(0.033)QEPQAK;AAAT(0.989)PES(0.011)QEPQAK;AAAT(1)PESQEPQAK;AAAT(0.999)PES(0.001)QEPQAK 195.87 0.00046671 39423300 22656.9 22578.8 22362.5 19383.1 22659.2 19278.3 21153.7 20944.1 18695.6 18983.4 TRUE FALSE 20729.81168 21108.91602 20844.59581 20875.98972 21756.63608 20369.82069 19742.57527 20760.98794 20639.07452 21335.20691 0.971624591 0.989393546 0.977004624 0.978476085 1.019752758 0.954751495 0.925351948 0.97308585 0.96737166 1 14.38094848 AAAT(ph)PESQEPQAK ddPTM_A459_MK2206_30min_R2 4 AAATPESQEPQAK 13 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 AAAT(1)PESQEPQAK;AAAT(1)PESQEPQAK;AAAT(1)PESQEPQAK;AAAT(1)PESQEPQAK 185.32 0.000294 80107000 201907 203588 195955 207486 185728 161311 226389 159067 175577 183743 TRUE FALSE 217365.1552 193478.116 202488.0419 190533.7301 178435.3855 167449.8031 196663.8524 179857.6031 190848.3701 177747.481 1.222887402 1.088499904 1.139189376 1.07193491 1.003870123 0.942065689 1.106422726 1.01187146 1.073705062 1 17.43946959 -4.594908728 0.701619034 1.025139871 1.35878524 0.579300501 0.049698734 2.903101392 0.904245094 0.021564397 0.817068988 2.54E-05 4.594908728 0.333645369 AAATGNAS(ph)PGKLEHSK ddPTM_A459_MK2206_30min_R1 1 AAATGNASPGKLEHSK 16 1 H0Y6H0;Q8NB78 H0Y6H0 KDM1B Lysine-specific histone demethylase 1B 1 AAAT(0.289)GNAS(0.685)PGKLEHS(0.026)K 61.767 0.037325 27018000 4052.5 4542.2 4498.6 4267.9 3847.9 3436 3605.1 3986.9 4423.9 3336.5 TRUE FALSE 3707.813594 4246.501954 4193.247566 4596.614397 3694.629995 3630.543351 3364.610357 3952.042954 4883.780236 3749.850809 0.98878963 1.132445575 1.118243839 1.225812607 0.985273864 0.968183412 0.897265125 1.05392005 1.302393211 1 11.87261748 -6.293986065 24.98832909 1.027023779 1.117611812 0.109514581 0.11306971 1456.072707 1117923.031 0.036840975 0.041777242 5.08E-07 6.293986065 0.090588033 AAATGNAS(ph)PGKLEHSK ddPTM_A459_MK2206_30min_R2 2 AAATGNASPGKLEHSK 16 1 H0Y6H0;Q8NB78 H0Y6H0 KDM1B Lysine-specific histone demethylase 1B 1 AAATGNAS(0.997)PGKLEHS(0.002)K;AAAT(0.002)GNAS(0.998)PGKLEHS(0.001)K 65.038 0.024308 77047000 250346 315110 299820 259157 290730 213379 328040 236603 245868 290850 TRUE FALSE 269512.6822 299462.0956 309815.8492 237983.0441 279314.4794 221499.2874 284967.954 267527.8245 267253.1542 281359.5883 0.957894074 1.064339401 1.101138408 0.845832358 0.992731334 0.787246273 1.012824747 0.95083955 0.949863325 1 18.1020556 -5.752471472 24.99944409 0.931735608 1.043445497 0.303432558 0.07415536 225.9290101 629806.11 0.019529615 0.0331972 1.77E-06 5.752471472 0.111709889 AAAYDIS(ph)EDEED ddPTM_A459_MK2206_30min_R2 2 AAAYDISEDEED 12 0 P49585 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 AAAYDIS(1)EDEED;AAAYDIS(1)EDEED 123.62 0.0032528 28469000 84277 108896 100987 115695 107961 107972 113175 81605 89356 100278 TRUE FALSE 90729.31192 103488.383 104353.8562 106242.3484 103721.9087 112080.9501 98314.98655 92271.05369 97128.02336 97005.93707 0.935296484 1.066825249 1.075747107 1.095214908 1.069232583 1.155402994 1.01349453 0.951189757 1.001258545 1 16.56578543 -7.512595087 24.616167 0.982202902 1.069544809 0.335390091 0.05266956 451.4837301 1080733.434 0.02365536 0.014754405 3.07E-08 7.512595087 0.087341907 AACPCPQSS(ph)PPEQK ddPTM_A459_MK2206_30min_R2 2 AACPCPQSSPPEQK 14 0 Q5THK1-2;Q5THK1-4;Q5THK1;H7BZH1;H7C1B0;H3BLU3 Q5THK1-2 PRR14L Protein PRR14L 1 AACPCPQS(0.025)S(0.975)PPEQK;AACPCPQS(0.066)S(0.934)PPEQK 201.08 3.44E-22 0 24745 28086 22883.3 27259 27814 22806.4 30715 20944.4 21235 27780 TRUE FALSE 26639.49623 26691.29008 23646.2178 25031.8525 26721.88261 23674.31353 26682.0836 23681.90499 23081.98192 26873.54088 0.991290889 0.993218207 0.87990704 0.93146834 0.994356595 0.880952519 0.992875622 0.881235007 0.858911076 1 14.7138988 -5.230263843 23.73714842 0.926428811 0.992254621 0.209556359 0.050301919 554.7182991 422360.338 0.012493372 0.033044003 5.88E-06 5.230263843 0.06582581 AACS(ph)SSEEDDCVSLSK ddPTM_A459_MK2206_30min_R2 1 AACSSSEEDDCVSLSK 16 0 E9PLD2;Q9H019-3;Q9H019;E9PPF9 E9PLD2 MTFR1L Mitochondrial fission regulator 1-like 1 AACS(0.497)S(0.497)S(0.006)EEDDCVSLSK 124.5 0.0010794 0 7626.7 13613 12092 13292 13520 10855 11577 8759.3 12373 10889 TRUE FALSE 8210.606016 12936.99822 12495.14124 12206.00108 12989.13687 11268.09463 10056.92599 9904.170585 13449.18117 10533.69282 0.779461311 1.228154118 1.186207103 1.158758024 1.233103821 1.069719311 0.954738871 0.94023727 1.276777423 1 13.36272367 -6.990146443 24.59962222 1.034282568 1.131649784 0.047390188 0.149165966 456.9965861 1140895.653 0.051967719 0.045777045 1.02E-07 6.990146443 0.097367216 AADAEAEVASLNRR ddPTM_A459_MK2206_30min_R2 1 AADAEAEVASLNRR 14 1 J3KN67;A0A2R2Y2Q3;A0A494C0P6;P06753 J3KN67 TPM3 Tropomyosin alpha-3 chain 0 131.08 0.0012429 5169600 11080 26584 23606 23939 33474 28438 23256 21184 32774 20001 FALSE TRUE 11928.29332 25263.87722 24393.01226 21983.10712 32159.64257 29520.22802 20202.45926 23952.82154 35624.62328 19348.36901 0.616501231 1.305736789 1.260727054 1.136173654 1.662137132 1.525721781 1.044142752 1.237976262 1.841220997 1 14.23992434 -4.758358855 4.960709636 1.343889859 0.566831535 0.416690636 0.255169614 0.179807512 11.42504374 0.063158281 0.490953464 1.74E-05 4.758358855 -0.777058324 AADEEAFEDNSEEYIR ddPTM_A459_MK2206_30min_R2 3 AADEEAFEDNSEEYIR 16 0 P55060-4;P55060-3;P55060 P55060-4 CSE1L Exportin-2 0 ;; 198.29 7.26E-08 7765500 20336.4 24433.6 19398.9 22296 22838.7 21531.9 23413.2 19870.9 19289.8 23491.5 FALSE TRUE 21893.37042 23220.26295 20045.64964 20474.34548 21941.93788 22351.31154 20339.01872 22468.09486 20967.59194 22724.97428 0.963405729 1.021794906 0.882097792 0.900962317 0.965542914 0.983557177 0.895007337 0.988696162 0.922667356 1 14.47199104 AADEEAFEDNSEEYIRR ddPTM_A459_MK2206_30min_R1 2 AADEEAFEDNSEEYIRR 17 1 P55060-4;P55060-3;P55060 P55060-4 CSE1L Exportin-2 0 ; 244.05 6.92E-23 21074000 4525 4347.1 4588 4337.3 5373.7 4249.2 4537.3 4175 3425.2 2483.9 FALSE TRUE 4140.124988 4064.103 4276.579343 4671.359598 5159.65415 4489.786032 4234.624996 4138.498415 3781.261797 2791.624284 1.483052362 1.455820191 1.531932276 1.673348245 1.848262382 1.60830598 1.516903625 1.4824697 1.354502401 1 11.44688907 -8.611947669 1.077745237 1.002472492 1.598946979 0.747039084 0.10524588 0.352866361 0.877040422 0.115426591 0.037074597 2.44E-09 8.611947669 0.596474487 AADEEAFEDNSEEYIRR ddPTM_A459_MK2206_30min_R2 1 AADEEAFEDNSEEYIRR 17 1 P55060-4;P55060-3;P55060 P55060-4 CSE1L Exportin-2 0 90.853 0.011845 3331000 8767.8 13104 10570 13797 15837 13515 12234 10106 14811 11043 FALSE TRUE 9439.069509 12453.27441 10922.39852 12669.74097 15215.15981 14029.3228 10627.6611 11426.8889 16099.23401 10682.66781 0.88358729 1.165745732 1.02244109 1.186009074 1.424284652 1.313278952 0.994850845 1.06966622 1.507042462 1 13.38298436 -4.003799362 0.91448682 1.209904583 2.68E-12 0.229785082 0.168982122 12.04169893 2.824410798 0.057859019 20.38807 9.91E-05 4.003799362 -1.209904583 AADGGERPLAAS(ph)PPGTVK ddPTM_A459_MK2206_30min_R1 2 AADGGERPLAASPPGTVK 18 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 AADGGERPLAAS(0.922)PPGT(0.078)VK;AADGGERPLAAS(0.998)PPGT(0.002)VK 142.23 0.0014391 24413400 5736 5638.8 5600.1 5041 5883.4 5259 5662.6 5573.5 5446.6 4808.9 TRUE FALSE 5248.123079 5271.713095 5219.980815 5429.258693 5649.05172 5556.760035 5284.858286 5524.771477 6012.793561 5404.662837 0.971036166 0.975400918 0.965829132 1.004550859 1.045218155 1.028141848 0.977833113 1.022223151 1.112519641 1 12.3999889 -5.949079539 3.743144879 1.029201299 0.971484787 0.400711306 0.032897755 0.247336247 7.215352977 0.009915083 0.014935478 1.12E-06 5.949079539 -0.057716512 AADGGERPLAAS(ph)PPGTVK ddPTM_A459_MK2206_30min_R2 1 AADGGERPLAASPPGTVK 18 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 AADGGERPLAAS(0.998)PPGT(0.002)VK 61.181 0.025568 13293000 47144 53563 55769 61205 60585 52253 60493 54094 56816 56111 TRUE FALSE 50753.38089 50903.13931 57628.31063 56204.35571 58206.12848 54241.52453 52550.19643 61164.27153 61757.75298 54280.10267 0.935027356 0.937786349 1.061683891 1.035450431 1.072329005 0.999289277 0.968130012 1.126826747 1.137760431 1 15.72813583 -5.25729993 23.75316055 1.050229818 0.936406821 0.441239237 0.051214116 166.6752817 956402.1514 0.014047206 0.034354179 5.53E-06 5.25729993 -0.113822997 AADIWS(ph)LGCT(ph)IIEMAT(ph)GKPPFYELGEPQAAMFK ddPTM_A459_MK2206_30min_R2 1 AADIWSLGCTIIEMATGKPPFYELGEPQAAMFK 33 1 Q99683-2;Q99683 Q99683-2 MAP3K5 Mitogen-activated protein kinase kinase kinase 5 3 AADIWS(0.999)LGCT(0.999)IIEMAT(0.806)GKPPFY(0.195)ELGEPQAAMFK 42.039 0.022439 8692500 6331.7 9212.6 5803.7 8537.2 13510 16309 13407 9952.8 11391 11118 TRUE FALSE 6816.45982 8755.11568 5997.192461 7839.683451 12979.52952 16929.65042 11646.6448 11253.66513 12381.76859 10755.22057 0.633781499 0.814034043 0.557607575 0.728918891 1.206812025 1.574086771 1.082882933 1.04634443 1.151233348 1 13.39274949 -6.239618296 5.773853289 1.195216346 0.680378567 0.695890362 0.159634237 0.104329793 12.29404887 0.050591132 0.063513243 5.76E-07 6.239618296 -0.514837779 AADKS(ph)PESQNLIDGTK ddPTM_A459_MK2206_30min_R1 1 AADKSPESQNLIDGTK 16 1 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 AADKS(0.499)PES(0.499)QNLIDGT(0.001)K 154.31 0.00055733 11018000 2322.4 2542.8 2059.1 1522.2 2027.7 1752.8 1829.2 1863.8 1990 1820.5 TRUE FALSE 2124.867685 2377.263258 1919.334029 1639.440108 1946.932415 1852.042021 1707.177406 1847.504993 2196.867621 2046.037284 1.03852833 1.161886578 0.938073829 0.801275774 0.95156253 0.905184884 0.834382354 0.902967413 1.073718274 1 10.99861672 -5.345128922 6.168825377 0.913757088 1.099222236 0.43702174 0.078419448 0.178797539 10.57276488 0.020363449 0.043216286 4.52E-06 5.345128922 0.185465148 AADKS(ph)PESQNLIDGTK ddPTM_A459_MK2206_30min_R2 3 AADKSPESQNLIDGTK 16 1 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 AADKS(0.998)PES(0.002)QNLIDGTK;AADKS(0.998)PES(0.002)QNLIDGTK;AADKS(0.988)PES(0.012)QNLIDGTK 110.33 0.0015482 82650000 189814 208920 209658 204235 191632 127453 230900 177891 136122 222963 TRUE FALSE 204346.3058 198545.3366 216647.8931 187548.3472 184107.5648 132303.3132 200582.5526 201141.9645 147961.6455 215687.7356 0.947417364 0.920522143 1.004451609 0.869536447 0.853583836 0.613402115 0.929967354 0.932560973 0.685999346 1 17.71858462 -5.957025149 4.242238052 0.828219687 0.95354672 0.192182733 0.110324576 0.340283553 13.38803778 0.031851717 0.04745191 1.10E-06 5.957025149 0.125327033 AADKSPES(ph)QNLIDGTK ddPTM_A459_MK2206_30min_R1 1 AADKSPESQNLIDGTK 16 1 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 AADKS(0.316)PES(0.684)QNLIDGTK 176.28 5.78E-06 10520000 1463.8 1609.1 1540.4 1397.3 1229.7 834.9 1082 1024.2 1303.5 1013.7 TRUE FALSE 1339.296123 1504.347298 1435.84194 1504.920288 1180.718445 882.1713165 1009.821754 1015.245527 1439.00349 1139.284809 1.17555866 1.320431279 1.260301137 1.320934218 1.036368111 0.774320266 0.886364626 0.891125309 1.263076167 1 10.15391274 -6.385688468 4.446892566 0.947431905 1.271211411 0.574743044 0.124463 0.162968301 5.169582099 0.040180052 0.045693757 4.11E-07 6.385688468 0.323779506 AADKSPES(ph)QNLIDGTK ddPTM_A459_MK2206_30min_R2 1 AADKSPESQNLIDGTK 16 1 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 AADKS(0.301)PES(0.696)QNLIDGT(0.003)K 170 4.94E-05 5147900 23791 24265 19817 20581 19370 15556 24387 18393 16894 25967 TRUE FALSE 25612.45725 23060.03538 20477.68889 18899.46646 18609.43647 16147.99448 21184.95761 20797.02825 18363.40958 25119.69892 1.019616411 0.918006042 0.815204392 0.752376313 0.740830395 0.64284188 0.843360332 0.827917099 0.731036214 1 14.61653155 -5.061656041 1.883055283 0.777930725 1.033986701 0.400597088 0.088880006 0.443784069 2.440127505 0.024036287 0.164573218 8.68E-06 5.061656041 0.256055976 AADPPAENSS(ph)APEAEQGGAE ddPTM_A459_MK2206_30min_R1 2 AADPPAENSSAPEAEQGGAE 20 0 H0Y449;P67809 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 AADPPAENS(0.214)S(0.786)APEAEQGGAE;AADPPAENS(0.241)S(0.759)APEAEQGGAE 182.09 1.69E-13 54189000 10563.2 10237 10182 9332.7 11232.1 10125 11017.8 9776.9 8241.2 7852.3 TRUE FALSE 9664.74437 9570.569439 9490.874209 10051.50617 10784.70167 10698.26875 10282.82267 9691.421594 9097.902231 8825.102206 1.095142486 1.084471229 1.075440713 1.138967678 1.222048359 1.212254374 1.165178876 1.098165366 1.030911826 1 13.10739727 -8.205060972 2.446309577 1.004718468 1.142498204 0.532060312 0.047098713 0.272337794 2.928420729 0.050421748 0.014968938 6.24E-09 8.205060972 0.137779735 AADPPAENSS(ph)APEAEQGGAE ddPTM_A459_MK2206_30min_R2 2 AADPPAENSSAPEAEQGGAE 20 0 H0Y449;P67809 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 AADPPAENS(0.099)S(0.901)APEAEQGGAE;AADPPAENS(0.172)S(0.828)APEAEQGGAE 193.19 1.62E-15 79539000 98978 117213 107784 135094 120738 132909 119079 90735 108838 103462 TRUE FALSE 106555.8318 111392.3729 111377.4648 124056.3881 115997.2195 137966.9451 103443.7843 102594.376 118304.5325 100086.0434 1.064642263 1.112966095 1.112817142 1.239497375 1.158974973 1.378483357 1.033548542 1.025061762 1.182028268 1 16.61088128 AADRLPNLS(ph)SPSAEGPPGPPSGPAPR ddPTM_A459_MK2206_30min_R1 1 AADRLPNLSSPSAEGPPGPPSGPAPR 26 1 O60784-3;O60784-4;O60784;O60784-2 O60784-3 TOM1 Target of Myb protein 1 1 AADRLPNLS(0.899)S(0.101)PSAEGPPGPPSGPAPR 168.41 2.31E-17 29332000 2043.9 1840.6 1510.1 1299.4 1859.9 1307.7 1614.1 1811.3 1244.7 1241.1 TRUE FALSE 1870.055572 1720.776605 1407.598619 1399.480013 1785.816245 1381.740844 1506.426334 1795.463995 1374.091019 1394.856838 1.340679216 1.233658221 1.009134831 1.003314444 1.280286404 0.990596889 1.079986342 1.287203064 0.985112581 1 10.44590134 -5.03551459 4.252748339 1.091435288 1.324409503 0.379654643 0.109165287 0.204499172 8.30667396 0.027492432 0.095466127 9.21E-06 5.03551459 0.232974215 AADRLPNLS(ph)SPSAEGPPGPPSGPAPR ddPTM_A459_MK2206_30min_R2 2 AADRLPNLSSPSAEGPPGPPSGPAPR 26 1 O60784-3;O60784-4;O60784;O60784-2 O60784-3 TOM1 Target of Myb protein 1 1 AADRLPNLS(0.493)S(0.493)PS(0.014)AEGPPGPPSGPAPR;AADRLPNLS(0.496)S(0.496)PS(0.009)AEGPPGPPSGPAPR 89.297 2.91E-05 7888500 10411.6 9479 6355.7 12401.2 9558.9 11636.3 13880.9 6554.4 10327.4 7276 TRUE FALSE 11208.7201 9008.286644 6567.595866 11387.98229 9183.569556 12079.12755 12058.32116 7411.082585 11225.65858 7038.584716 1.592467883 1.279843464 0.933084722 1.617936382 1.304746611 1.716130165 1.713174117 1.052922268 1.594874401 1 12.78106965 -10.67483513 3.767597053 0.99976543 1.412746405 0.190734417 0.260527877 93991706.45 165660613.2 299641.9026 0.065602217 2.11E-11 10.67483513 0.412980975 AADRLPNLSS(ph)PSAEGPPGPPSGPAPR ddPTM_A459_MK2206_30min_R1 3 AADRLPNLSSPSAEGPPGPPSGPAPR 26 1 O60784-3;O60784-4;O60784;O60784-2 O60784-3 TOM1 Target of Myb protein 1 1 AADRLPNLS(0.134)S(0.84)PS(0.026)AEGPPGPPSGPAPR;AADRLPNLS(0.03)S(0.958)PS(0.012)AEGPPGPPSGPAPR;AADRLPNLS(0.149)S(0.837)PS(0.014)AEGPPGPPSGPAPR 160.33 2.46E-14 46369900 3950.4 3305.55 3577.7 3274.3 3522.73 3299.01 3292.57 3442.6 2771.29 2726.6 TRUE FALSE 3614.397736 3090.358094 3334.855692 3526.487153 3382.412205 3485.797095 3072.928663 3412.501711 3059.375513 3064.391793 1.179482906 1.008473558 1.088260222 1.150795131 1.103779292 1.137516783 1.002785829 1.113598372 0.998363042 1 11.58138505 -8.076382433 0.922872766 0.99745721 1.104230842 0.33584325 0.054115586 0.678126406 1.125881845 0.049324727 0.018483472 8.39E-09 8.076382433 0.106773632 AADRLPNLSS(ph)PSAEGPPGPPSGPAPR ddPTM_A459_MK2206_30min_R2 2 AADRLPNLSSPSAEGPPGPPSGPAPR 26 1 O60784-3;O60784-4;O60784;O60784-2 O60784-3 TOM1 Target of Myb protein 1 1 AADRLPNLS(0.267)S(0.717)PS(0.016)AEGPPGPPSGPAPR;AADRLPNLS(0.261)S(0.722)PS(0.018)AEGPPGPPSGPAPR 124.61 4.21E-09 72876000 22005.5 27758.8 22294.7 25949 29550.2 21508.3 25983.6 17476.6 22855.8 19650.6 TRUE FALSE 23690.258 26380.33836 23037.99417 23828.88369 28389.91067 22326.81343 22571.92211 19760.85163 24843.75617 19009.40253 1.246238958 1.387752104 1.211926263 1.253531438 1.493466753 1.174514212 1.187408288 1.03953039 1.306919359 1 14.21442557 -6.973993739 24.99847856 1.143073294 1.314996929 0.405030772 0.107831464 230.4829793 221550.7299 0.036461677 0.032155359 1.06E-07 6.973993739 0.171923634 AADSGS(ph)WER ddPTM_A459_MK2206_30min_R2 1 AADSGSWER 9 0 Q674X7-3 Q674X7-3 KAZN Kazrin 1 AADS(0.16)GS(0.84)WER 88.134 0.031598 14617000 52427 63482 42350 50797 55355 51767 61521 47338 47934 58956 TRUE FALSE 56440.85143 60329.57619 43761.92786 46646.72261 53181.48456 53737.02946 53443.2188 53525.23914 52103.21268 57032.27055 0.989630097 1.057814736 0.767318703 0.8179005 0.932480577 0.942221464 0.937069808 0.938507947 0.91357423 1 15.79949085 -6.502606632 24.52022408 0.941355582 0.904594172 0.047601756 0.078298272 2477.828494 2997073.025 0.026778343 0.029985251 3.14E-07 6.502606632 -0.036761411 AAEAGGAEEQYGFLT(ph)TPTK ddPTM_A459_MK2206_30min_R1 4 AAEAGGAEEQYGFLTTPTK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AAEAGGAEEQYGFLT(0.5)T(0.5)PTK;AAEAGGAEEQYGFLT(0.5)T(0.5)PTK;AAEAGGAEEQYGFLT(0.992)T(0.008)PTK;AAEAGGAEEQYGFLT(0.5)T(0.5)PT(0.001)K 286.85 7.05E-85 246708900 19565.04 19337.39 18101.4 16668.42 16744.88 15794.41 16134.45 16168.02 14591.86 13393.94 TRUE FALSE 17900.93061 18078.5224 16872.7274 17952.2246 16077.89597 16688.67584 15058.15028 16026.66471 16108.73606 15053.28241 1.189171247 1.200968793 1.120866994 1.192578742 1.06806579 1.108640321 1.000323376 1.064662462 1.070114519 1 13.87779048 -6.399491398 0.852335922 1.035840369 1.191565767 0.740042704 0.036160739 0.313182341 0.497756127 0.019188368 0.027039947 3.99E-07 6.399491398 0.155725398 AAEAGGAEEQYGFLT(ph)TPTK ddPTM_A459_MK2206_30min_R2 4 AAEAGGAEEQYGFLTTPTK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AAEAGGAEEQYGFLT(0.425)T(0.425)PT(0.15)K;AAEAGGAEEQYGFLT(0.693)T(0.23)PT(0.077)K;AAEAGGAEEQYGFLT(0.489)T(0.489)PT(0.022)K;AAEAGGAEEQYGFLT(0.5)T(0.5)PTK 206.62 5.86E-16 57769400 258909 304889 249233 278138 334288 248544 337527 220649 243619 295873 TRUE FALSE 278731.2721 289748.6556 257542.3038 255413.2357 321162.1735 258002.5161 293209.2995 249488.5819 264808.5403 286218.6882 0.973840226 1.012333113 0.899809532 0.892370925 1.122086665 0.901417436 1.024424021 0.871671181 0.925196541 1 18.12675835 -7.760687714 24.9999984 0.923825409 0.973340896 0.065268572 0.072052714 52.11044136 1733380.592 0.035437436 0.018900715 1.74E-08 7.760687714 0.049515487 AAEAGGAEEQYGFLTT(ph)PTK ddPTM_A459_MK2206_30min_R1 5 AAEAGGAEEQYGFLTTPTK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AAEAGGAEEQYGFLT(0.01)T(0.99)PTK;AAEAGGAEEQYGFLT(0.37)T(0.62)PT(0.01)K;AAEAGGAEEQYGFLT(0.032)T(0.964)PT(0.004)K;AAEAGGAEEQYGFLT(0.024)T(0.976)PTK;AAEAGGAEEQYGFLT(0.01)T(0.99)PTK 244.54 5.60E-30 921501700 30189.66 33256.19 28734.34 27842.72 28309.6 24094.68 27549.53 25996.75 24321.02 22543.12 TRUE FALSE 27621.87088 31091.20599 26783.93306 29987.17112 27181.96869 25458.89996 25711.75112 25769.46316 26849.27706 25335.9319 1.090225179 1.227158571 1.057152078 1.183582717 1.072862399 1.004853505 1.014833448 1.017111321 1.059731182 1 14.62889727 -6.506187499 4.370683932 1.020945514 1.139625107 0.601726259 0.046029115 0.135583168 6.294868183 0.014155062 0.01521089 3.12E-07 6.506187499 0.118679593 AAEAGGAEEQYGFLTT(ph)PTK ddPTM_A459_MK2206_30min_R2 6 AAEAGGAEEQYGFLTTPTK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AAEAGGAEEQYGFLT(0.019)T(0.979)PT(0.002)K;AAEAGGAEEQYGFLT(0.176)T(0.814)PT(0.01)K;AAEAGGAEEQYGFLT(0.016)T(0.98)PT(0.004)K;AAEAGGAEEQYGFLT(0.098)T(0.901)PT(0.001)K;AAEAGGAEEQYGFLT(0.088)T(0.911)PT(0.001)K;AAEAGGAEEQYGFLT(0.026)T(0.973)PTK 250.1 2.61E-37 941181100 746726 802796 721802 802208 885811 686242 896653 641167 661224 781312 TRUE FALSE 803895.9167 762930.318 745866.5184 736665.0403 851029.6093 712357.4202 778921.384 724969.7284 718736.0683 755817.8534 1.063610648 1.009410289 0.986833686 0.974659486 1.125971827 0.9424988 1.03056759 0.959185768 0.950938199 1 19.52767907 -7.473098098 1.517828104 0.968789556 1.020864308 0.149444735 0.0496154 0.79116965 3.515393643 0.032406925 0.016117689 3.36E-08 7.473098098 0.052074752 AAEDDEDDDVDTK ddPTM_A459_MK2206_30min_R1 5 AAEDDEDDDVDTK 13 0 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 0 ;;;; 347.76 8.11E-159 195083800 11950.8 14121.7 15306.9 13005.5 10310.1 10121.2 11138.1 11610.3 12573.2 12285.8 FALSE TRUE 10934.3217 13202.37476 14267.91028 14007.18586 9899.426885 10694.2536 10395.09767 11508.79237 13880.22913 13807.85766 0.791891253 0.956149396 1.033318175 1.014435853 0.716941551 0.774504913 0.752839284 0.833495873 1.005241326 1 13.75320188 -4.727038836 23.21966749 0.88707232 0.791889531 0.064362167 0.114718083 7718.361843 5208993.637 0.03142902 4.950841051 1.87E-05 4.727038836 -0.095182789 AAEDDEDDDVDTK ddPTM_A459_MK2206_30min_R2 3 AAEDDEDDDVDTK 13 0 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 0 ;; 262.07 1.04E-28 609000000 312569.1 296636.9 335385.5 293561.4 293586 221440.1 323972.8 265108.7 264012.8 342984.5 FALSE TRUE 336499.6306 281906.3429 346567.0852 269576.4946 282058.3385 229867.1582 281434.7822 299759.3173 286976.1561 331792.9439 1.014185614 0.849645383 1.044528196 0.81248411 0.850103487 0.692803034 0.848224133 0.90345296 0.864925434 1 18.33992368 -5.780423885 24.99998645 0.842106782 0.957472331 0.265858779 0.086548596 306.0215766 402987.4549 0.024003414 0.035668228 1.66E-06 5.780423885 0.115365548 AAEDDEDDDVDTKK ddPTM_A459_MK2206_30min_R1 7 AAEDDEDDDVDTKK 14 1 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 0 ;;;;;; 275.95 3.92E-44 82209600 12555.42 15568.14 16036.49 14344.2 10130.46 9139.51 10908.16 11404.62 12864.32 13111.48 FALSE TRUE 11487.5156 14554.65126 14947.97774 15448.99277 9726.942327 9656.981158 10180.49655 11304.91061 14201.6121 14735.82913 0.779563572 0.987704942 1.014396788 1.048396574 0.660087888 0.655340197 0.690866897 0.767171668 0.963747067 1 13.84704062 -6.257638736 24.9806561 0.766250996 0.963734811 0.277884204 0.129277454 385.8948393 2536386.413 0.039494377 0.04903528 5.53E-07 6.257638736 0.197483816 AAEDDEDDDVDTKK ddPTM_A459_MK2206_30min_R2 6 AAEDDEDDDVDTKK 14 1 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 0 ;;;;; 161.87 0.00037877 710189000 437895 415117 456399 388962 419691 256530 496563 376939 324020 490199 FALSE TRUE 471420.5779 394502.8934 471615.1149 357182.5604 403211.8226 266292.4289 431363.6816 426206.2215 352202.6739 474203.8468 0.994130649 0.83192681 0.994540888 0.753225776 0.85029218 0.561556872 0.909658757 0.898782716 0.742724202 1 18.85514784 -5.764673202 24.99737455 0.807042168 0.929372186 0.178279781 0.119700488 141.68299 1095219.533 0.03269777 0.050884055 1.72E-06 5.764673202 0.122330018 AAEDSPYWVS(ph)PAYSK ddPTM_A459_MK2206_30min_R1 2 AAEDSPYWVSPAYSK 15 0 Q9NW82 Q9NW82 WDR70 WD repeat-containing protein 70 1 AAEDSPYWVS(0.999)PAYS(0.001)K;AAEDS(0.004)PYWVS(0.897)PAYS(0.099)K 190.44 2.74E-05 7411700 2372.5 2149 2154.7 1544.34 1937.41 1842.38 1766.95 1658.99 1554.01 1407.76 TRUE FALSE 2170.706417 2009.099709 2008.444967 1663.285334 1860.238857 1946.693963 1649.079989 1644.485625 1715.554901 1582.163937 1.371985776 1.269842943 1.269429116 1.051272435 1.175756073 1.230399656 1.042294007 1.039390159 1.084309192 1 10.62768338 -1.522878745 0.228825164 1.006503287 3.033312373 0.734927445 0.062062213 27.37429577 0.35736778 0.095584723 20.74581543 0.03 1.522878745 2.026809086 AAEEAFVNDIDESS(ph)PGTEWER ddPTM_A459_MK2206_30min_R1 2 AAEEAFVNDIDESSPGTEWER 21 0 P09496-2;P09496-5 P09496-2 CLTA Clathrin light chain A 1 AAEEAFVNDIDES(0.244)S(0.755)PGT(0.001)EWER;AAEEAFVNDIDES(0.205)S(0.793)PGT(0.002)EWER 210.58 5.15E-18 6808100 3397.2 3400.1 3531.5 3227.6 3821.6 3230.8 3776.9 3477.5 2869.6 2392.7 TRUE FALSE 3108.250301 3178.752872 3291.791619 3476.190311 3669.37758 3413.725104 3524.949892 3447.096584 3167.905189 2689.12574 1.155859042 1.182076697 1.224112198 1.292684183 1.36452436 1.269455367 1.310816315 1.281865155 1.17804279 1 11.3929215 -8.623728675 3.036680019 1.000184634 1.262460809 0.650802838 0.057919281 0.284975216 5.949718259 0.062853669 0.016718039 2.38E-09 8.623728675 0.262276175 AAEEAFVNDIDESSPGTEWER ddPTM_A459_MK2206_30min_R1 1 AAEEAFVNDIDESSPGTEWER 21 0 P09496-2;P09496-5 P09496-2 CLTA Clathrin light chain A 0 212.7 4.73E-41 0 415.89 292.19 437.64 289.78 545.09 269.3 536.59 304.74 278.87 378.8 FALSE TRUE 380.5163716 273.1683779 407.9342161 312.0989058 523.3779111 284.5475333 500.7950602 302.0756903 307.8595344 425.7286038 0.893800342 0.641649106 0.958202509 0.733093579 1.229369853 0.668377766 1.176324672 0.709549905 0.723135659 1 8.733790215 -5.280753409 24.76993462 0.896817056 0.76772468 0.068366034 0.194716462 1797.561294 2305341.496 0.048419056 0.101044625 5.24E-06 5.280753409 -0.129092377 AAEEAFVNDIDESSPGTEWER ddPTM_A459_MK2206_30min_R2 3 AAEEAFVNDIDESSPGTEWER 21 0 P09496-2;P09496-5 P09496-2 CLTA Clathrin light chain A 0 ;; 213.51 4.33E-41 5567400 14772.4 19929.9 17289.2 19689.7 18213.8 20537.3 19600.5 16689.1 19243.3 17410.5 FALSE TRUE 15903.3863 18940.21015 17865.6133 18080.98853 17498.63469 21318.86134 17026.93081 18870.42267 20917.04745 16842.39681 0.944247216 1.124555511 1.060752427 1.07354011 1.03896345 1.265785481 1.010956516 1.120411951 1.241928194 1 14.03980984 AAEEEDEADPKR ddPTM_A459_MK2206_30min_R1 4 AAEEEDEADPKR 12 1 P20962 P20962 PTMS Parathymosin 0 ;;; 120.77 0.0053448 79725000 15177.1 15445.6 16027 14754.2 14806.4 12328.2 14148.9 14588.3 12031.2 12272.6 FALSE TRUE 13886.20795 14440.08863 14939.13189 15890.57104 14216.62973 13026.21203 13205.0527 14460.75603 13281.88629 13793.02234 1.006755996 1.046912582 1.083093431 1.152073175 1.030711717 0.944405926 0.95737195 1.048410977 0.962942419 1 13.751651 -6.524192462 24.13017731 0.984460778 1.073706028 0.490490559 0.043083709 25.50435843 468437.6971 0.014886127 0.015009295 2.99E-07 6.524192462 0.089245251 AAEEEDEADPKR ddPTM_A459_MK2206_30min_R2 3 AAEEEDEADPKR 12 1 P20962 P20962 PTMS Parathymosin 0 ;; 158.56 0.00061591 61852000 215603 277107 247161 278433 260695 213278 267642 220173 220159 240492 FALSE TRUE 232109.7315 263346.2693 255401.2244 255684.1332 250458.8044 221394.4437 232500.2839 248950.3671 239308.0319 232644.7657 0.997700209 1.131967309 1.097816336 1.099032391 1.076571844 0.951641629 0.999378959 1.070087978 1.028641376 1 17.8277692 -6.583316369 13.22494464 1.013682714 1.086558765 0.408220529 0.042292265 1.117790749 242.857536 0.014168747 0.01416808 2.61E-07 6.583316369 0.072876051 AAEEQGDDQDS(ph)EK ddPTM_A459_MK2206_30min_R2 1 AAEEQGDDQDSEK 13 0 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 AAEEQGDDQDS(1)EK 189.8 0.00015892 8287900 24884 10775 17787 13783 14656 11238 16892 18916 12205 24424 TRUE FALSE 26789.13817 10239.92917 18380.0097 12656.88481 14080.5318 11665.66996 14674.06011 21388.38615 13266.56884 23627.04688 1.133833539 0.433398605 0.777922429 0.535694743 0.595949713 0.493742194 0.621070428 0.905250083 0.561499239 1 14.5281517 -10.82339027 6.053020948 1.000019668 0.662885621 0.189290354 0.201922107 5.05E-05 5.84E-06 0.184230539 0.044679866 1.50E-11 10.82339027 -0.337134047 AAEEQGDDQDSEK ddPTM_A459_MK2206_30min_R2 2 AAEEQGDDQDSEK 13 0 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 0 ; 194.24 4.28E-20 3767000 24773 19965.8 22096.6 21697.5 22772 17645.8 21142.1 25195.8 20463.4 28847 FALSE TRUE 26669.63993 18974.3274 22833.28962 19924.74484 21877.85686 18317.32328 18366.11687 28488.97757 22243.26954 27905.72475 0.955704973 0.679943903 0.818229586 0.714002056 0.78399171 0.656400199 0.658148715 1.02090083 0.797086252 1 14.7682735 -7.761598891 24.99999993 0.931745157 0.748147341 0.416723553 0.101169146 4.125700952 646189.6492 0.049095126 0.025930267 1.73E-08 7.761598891 -0.183597816 AAEHDLEVAS(ph)EEEQER ddPTM_A459_MK2206_30min_R2 2 AAEHDLEVASEEEQER 16 0 E7ESJ3;Q9UPS8 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 1 AAEHDLEVAS(1)EEEQER;AAEHDLEVAS(1)EEEQER 148.06 0.00019791 17122500 69654 53428 61122 67123 55327 63452 69391 63354 42534 72724 TRUE FALSE 74986.76379 50774.84321 63159.77697 61638.83618 53154.58398 65866.71032 60279.87835 71634.58533 46233.53044 70351.02184 1.065894451 0.721735689 0.89778052 0.876161207 0.755562359 0.936258047 0.856844389 1.018245129 0.657183495 1 16.10228376 AAEPHFGT(ph)LPK ddPTM_A459_MK2206_30min_R1 1 AAEPHFGTLPK 11 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0;A8MY87 KSR1 Kinase suppressor of Ras 1 1 AAEPHFGT(1)LPK 132.5 0.0046757 3060500 3025.2 3135.2 2710 2362.8 2197.6 1687.9 2198.3 2177 2179.3 1394.6 TRUE FALSE 2767.890854 2931.09791 2526.05275 2544.783265 2110.064939 1783.467439 2051.655418 2157.966719 2405.846034 1567.373577 1.765942016 1.870069748 1.61164689 1.623597146 1.34624251 1.137870043 1.308976653 1.376804325 1.534953804 1 10.61413337 -6.008699589 1.568855069 1.290945127 1.793670249 0.69501963 0.143491322 0.227776767 1.131717106 0.049825133 0.084780709 9.80E-07 6.008699589 0.502725122 AAESET(ph)PGKSPEK ddPTM_A459_MK2206_30min_R1 1 AAESETPGKSPEK 13 1 O76021;J3QSV6;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAES(0.109)ET(0.655)PGKS(0.236)PEK 122.64 0.027031 136210000 5869.4 6608 7287.9 5160.4 2773.6 3428.1 4662 4013.1 6518.2 8669.4 TRUE FALSE 5370.176709 6177.817999 6793.217653 5557.854902 2663.121639 3622.196059 4351.006486 3978.01389 7195.790216 9743.430723 0.55115871 0.634049564 0.697210033 0.570420734 0.27332484 0.371757768 0.446557954 0.40827651 0.738527365 1 13.25021413 -8.526480007 3.671445742 0.998979222 0.496244931 0.641404907 0.120160546 0.142568933 5.376495494 0.133693503 0.035192139 2.98E-09 8.526480007 -0.502734291 AAESETPGKS(ph)PEK ddPTM_A459_MK2206_30min_R1 1 AAESETPGKSPEK 13 1 O76021;J3QSV6;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAESET(0.005)PGKS(0.995)PEK 168.45 0.0013269 159210000 4178.4 5981.3 5659 3607.9 2119.1 2421.3 3443.3 3258.2 4614.1 5795.4 TRUE FALSE 3823.005138 5591.916283 5274.882847 3885.781083 2034.69176 2558.391914 3213.60374 3229.713901 5093.752207 6513.377905 0.586946619 0.858527843 0.809853646 0.59658462 0.312386566 0.392790339 0.49338512 0.495858516 0.782044629 1 12.66919022 -10.51170512 9.462413625 1 0.58660354 0.338830865 0.170810783 3.97E-10 0 0.186932032 0.045337678 3.08E-11 10.51170512 -0.413396461 AAESETPGKS(ph)PEK ddPTM_A459_MK2206_30min_R2 4 AAESETPGKSPEK 13 1 O76021;J3QSV6;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAES(0.041)ET(0.021)PGKS(0.938)PEK;AAES(0.032)ET(0.03)PGKS(0.938)PEK;AAES(0.005)ET(0.062)PGKS(0.933)PEK;AAES(0.001)ET(0.009)PGKS(0.991)PEK 155.37 0.0017354 233155900 290894 177632 195213 141639.3 149432.8 85759.7 242823 168385.6 103456.5 240393 TRUE FALSE 313165.0683 168811.0532 201721.304 130066.9161 143565.3174 89023.34548 210940.0484 190394.1761 112454.9594 232548.9961 1.34666274 0.725916069 0.867435712 0.55930973 0.617355137 0.382815437 0.907077872 0.818727147 0.483575338 1 17.82717519 AAESETPGKS(ph)PEKKPK ddPTM_A459_MK2206_30min_R1 2 AAESETPGKSPEKKPK 16 3 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAES(0.001)ET(0.005)PGKS(0.994)PEKKPK;AAESETPGKS(1)PEKKPK 108.75 0.01288 296561000 11019.8 13565.5 13568.9 12563.5 7293.8 5840.5 7247.9 10446.3 8961.5 8555 TRUE FALSE 10082.50814 12682.38348 12647.88087 13531.14295 7003.272501 6171.184063 6764.405816 10354.9691 9893.079994 9614.857987 1.04863828 1.319040125 1.315451657 1.407315944 0.728380233 0.641838296 0.703536737 1.076975772 1.028936674 1 13.23104983 -6.262136136 24.9997442 0.848067691 1.27898785 0.607874692 0.160749387 45.47383989 1631609.289 0.053450724 0.064268868 5.47E-07 6.262136136 0.430920159 AAEVVASAMRPGPES(ph)PSTR ddPTM_A459_MK2206_30min_R2 2 AAEVVASAMRPGPESPSTR 19 1 A0A1B0GV70;Q96N21-2 A0A1B0GV70 ENTHD2 AP-4 complex accessory subunit tepsin 1 AAEVVASAMRPGPES(0.48)PS(0.48)T(0.039)R;AAEVVASAMRPGPES(0.72)PS(0.215)T(0.065)R 99.923 0.00072525 14761100 26806 34639 37128 35601 34791 39550 32543 32519 30908 38548 TRUE FALSE 28858.28797 32918.87763 38365.82899 32692.28442 33424.93053 41055.10296 28270.06501 36769.34495 33596.32197 37290.18192 0.773884344 0.882776 1.028845316 0.876699515 0.896346674 1.100962796 0.758110139 0.986032866 0.900942828 1 15.18650821 -4.865297162 3.697950533 0.938866213 0.769437734 0.248519735 0.089710265 0.333474859 7.655353783 0.021478233 0.132142365 1.36E-05 4.865297162 -0.169428479 AAFDDAIAELDTLS(ph)EESYK ddPTM_A459_MK2206_30min_R1 1 AAFDDAIAELDTLSEESYK 19 0 P62258;P62258-2;K7EM20 P62258 YWHAE 14-3-3 protein epsilon 1 AAFDDAIAELDT(0.306)LS(0.689)EES(0.005)YK 54.306 0.040624 2965300 451.2 251.45 269.46 289.77 221.53 205.33 236.72 150.85 324.33 342.49 TRUE FALSE 412.8230707 235.0805593 251.169806 312.0881356 212.705991 216.9556072 220.9288407 149.5311344 358.0452641 384.9202469 1.072489883 0.610725368 0.652524277 0.810786489 0.552597565 0.563637816 0.573960041 0.388473029 0.930180387 1 8.588415749 -4.758225586 24.99121709 0.6497073 1.072490468 0.297554748 0.178791341 102.3991514 796147.0973 0.042039971 0.292505364 1.74E-05 4.758225586 0.422783169 AAFDDAIAELDTLSEESYK ddPTM_A459_MK2206_30min_R1 2 AAFDDAIAELDTLSEESYK 19 0 P62258;P62258-2;K7EM20 P62258 YWHAE 14-3-3 protein epsilon 0 ; 397.14 1.11E-293 5839400 2878.79 2604.22 2036.46 2585.2 2379.58 2847.84 2985.21 2299.98 2198.35 2648.3 FALSE TRUE 2633.933793 2434.684805 1898.230769 2784.312552 2284.79629 3009.08224 2786.072088 2279.871517 2426.876349 2976.391398 0.884942012 0.817998872 0.637762483 0.935465865 0.76763973 1.010983381 0.936057029 0.765985118 0.815375408 1 11.53934854 AAFQAS(ph)TR ddPTM_A459_MK2206_30min_R1 2 AAFQASTR 8 0 A6NFA1 A6NFA1 TRABD2B Metalloprotease TIKI2 1 AAFQAS(0.5)T(0.5)R;AAFQAS(0.5)T(0.5)R 91.906 0.026209 3095200 760.01 885.8 648.54 758.2 651.95 565.26 946.34 946.68 436.58 541.61 TRUE FALSE 695.3671585 828.134259 604.5189117 816.5966954 625.981451 597.2645327 883.2113853 938.4032766 481.9640533 608.7087357 1.142364349 1.36047704 0.993116866 1.341522879 1.028375994 0.981199213 1.450958945 1.541629389 0.791781069 1 9.24960826 -5.222405165 24.99488937 1.168908347 1.251420551 0.024510205 0.229934259 3035.996189 1944039.423 0.058261975 0.154141031 5.99E-06 5.222405165 0.082512205 AAFTTPDHAPLS(ph)PQSSVASSGSEQTEEQGSSR ddPTM_A459_MK2206_30min_R1 4 AAFTTPDHAPLSPQSSVASSGSEQTEEQGSSR 32 0 M0QZ22;Q5PRF9;A0A087WZT0;M0R0X3 M0QZ22 SAMD4B Protein Smaug homolog 2 1 AAFTTPDHAPLS(0.998)PQS(0.002)SVASSGSEQTEEQGSSR;AAFTTPDHAPLS(0.999)PQS(0.001)SVASSGSEQTEEQGSSR;AAFTTPDHAPLS(0.999)PQS(0.001)SVASSGSEQTEEQGSSR;AAFTTPDHAPLS(0.986)PQS(0.014)SVASSGSEQTEEQGSSR 180.13 1.12E-34 160609000 9043.3 7110.4 8690.2 6508.1 8686.1 7229 8307.9 7721.3 5699.6 6438.78 TRUE FALSE 8274.119847 6647.511668 8100.333436 7009.35499 8340.114244 7638.299733 7753.69515 7653.793488 6292.093816 7236.464677 1.143392557 0.918613158 1.119377182 0.968615934 1.152512258 1.055529195 1.071475575 1.057670262 0.869498311 1 12.82106934 -8.239683381 23.73129333 0.93474918 1.058256073 0.311700109 0.074901015 408.399324 445481.258 0.046689225 0.017603567 5.76E-09 8.239683381 0.123506893 AAFTTPDHAPLS(ph)PQSSVASSGSEQTEEQGSSR ddPTM_A459_MK2206_30min_R2 4 AAFTTPDHAPLSPQSSVASSGSEQTEEQGSSR 32 0 M0QZ22;Q5PRF9;A0A087WZT0;M0R0X3 M0QZ22 SAMD4B Protein Smaug homolog 2 1 AAFTTPDHAPLS(0.999)PQS(0.001)SVASSGSEQTEEQGSSR;AAFTTPDHAPLS(0.982)PQS(0.017)S(0.001)VASSGSEQTEEQGSSR;AAFTTPDHAPLS(0.998)PQS(0.001)SVASSGSEQTEEQGSSR;AAFTTPDHAPLS(0.998)PQS(0.001)S(0.001)VASSGSEQTEEQGSSR 149.91 8.11E-21 235046000 266159 322891 260442 338261 301208 314727 270773 252609 257560 237840 TRUE FALSE 286536.3377 306856.7025 269125.0063 310623.9943 289381.0605 326704.1565 235220.1798 285625.8636 279962.1032 230079.3003 1.245380777 1.333699738 1.169705428 1.350073622 1.257744874 1.419963274 1.022343946 1.241423558 1.216807 1 17.81177167 -9.177546831 0.396369891 0.969313475 1.290122048 0.400279132 0.098579611 2.969835353 0.801660824 0.273175177 0.07218859 6.64E-10 9.177546831 0.320808573 AAFTTPDHAPLSPQS(ph)SVASSGSEQTEEQGSSR ddPTM_A459_MK2206_30min_R2 1 AAFTTPDHAPLSPQSSVASSGSEQTEEQGSSR 32 0 M0QZ22;Q5PRF9;A0A087WZT0;M0R0X3 M0QZ22 SAMD4B Protein Smaug homolog 2 1 AAFTTPDHAPLS(0.349)PQS(0.479)S(0.168)VAS(0.004)SGSEQTEEQGSSR 78.607 0.00017399 0 3417.3 6805.1 4621.4 4551.8 4920.9 5141.4 3795.2 4088.5 3925.9 4725.9 TRUE FALSE 3678.931115 6467.16863 4775.475169 4179.90338 4727.68074 5337.05958 3296.885681 4622.880988 4267.367686 4571.69427 0.80471941 1.414610918 1.044574481 0.914300724 1.034120057 1.167413931 0.721151828 1.011196444 0.933432429 1 12.15851321 -6.379232307 0.833113996 0.93954606 1.103546587 0.064505795 0.175879346 1.541193602 2.340695753 0.097002221 0.14126704 4.18E-07 6.379232307 0.164000527 AAGARPLT(ph)SPESLSR ddPTM_A459_MK2206_30min_R1 2 AAGARPLTSPESLSR 15 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 AAGARPLT(0.686)S(0.312)PES(0.002)LSR;AAGARPLT(0.5)S(0.5)PESLSR 118.52 0.020885 32927900 4932 4468.2 5155.4 4785.3 5867.8 4478.3 4669.1 5143 3454.5 2983.4 TRUE FALSE 4512.507501 4177.319368 4805.465812 5153.864635 5634.073101 4731.857476 4357.632858 5098.035293 3813.607637 3353.006116 1.345809505 1.245843051 1.433181344 1.537087753 1.680305048 1.411228406 1.299619717 1.520437219 1.137369723 1 11.7112394 -8.424195808 3.916259312 1.003521305 1.433679838 0.608875495 0.119270536 0.154824102 4.040724005 0.126161292 0.033207476 3.77E-09 8.424195808 0.430158533 AAGARPLT(ph)SPESLSR ddPTM_A459_MK2206_30min_R2 1 AAGARPLTSPESLSR 15 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 AAGARPLT(0.729)S(0.271)PESLSR 165.78 0.00087038 20783000 24546 31288 25511 28656 28613 31165 30277 16477 26833 30492 TRUE FALSE 26425.26063 29734.28342 26361.52401 26314.71313 27489.50985 32351.00591 26301.59353 18630.60047 29166.88584 29497.04854 0.895861177 1.008042665 0.893700398 0.89211343 0.931941032 1.096753998 0.891668653 0.631608971 0.988806924 1 14.84828299 -7.520443039 24.99994848 0.838452552 0.9528941 0.074053773 0.112301062 171.6226125 1761584.201 0.049874373 0.029430407 3.02E-08 7.520443039 0.114441548 AAGDGDCGTTHSR ddPTM_A459_MK2206_30min_R2 1 AAGDGDCGTTHSR 13 0 H0YCY6;Q3LXA3-2;Q3LXA3;I3L252 H0YCY6 TKFC;DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) 0 109.6 0.01179 0 0 450.39 0 0 0 0 0 2417.2 897.88 666.38 FALSE TRUE 0 428.0242875 0 0 0 0 0 2733.136339 975.9759794 644.6360752 0 0.663978179 0 0 0 0 0 4.239812888 1.513995287 1 9.332341117 -7.727602643 24.99683361 2.407678894 0.102149266 0.59799305 0.807168427 102.2115108 75508.58999 0.350600219 0.202405096 1.87E-08 7.727602643 -2.305529628 AAGGAPS(ph)PPPPVR ddPTM_A459_MK2206_30min_R1 3 AAGGAPSPPPPVR 13 0 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR 145.61 0.00062246 151944000 7818.3 7885.6 7421.6 6000.3 8805.2 8906.6 8533.5 6756.8 6957.7 6825.1 TRUE FALSE 7153.312529 7372.246007 6917.84247 6462.444146 8454.470239 9410.883995 7964.245785 6697.72601 7680.977813 7670.644915 0.932556859 0.961098589 0.901859302 0.842490327 1.102185062 1.226869983 1.038275904 0.87316335 1.00134707 1 12.90513216 -6.264416089 24.99714436 1.043191667 0.912640938 0.345705984 0.088062692 350.8082304 2945933.574 0.030664091 0.036234023 5.44E-07 6.264416089 -0.130550729 AAGGAPS(ph)PPPPVR ddPTM_A459_MK2206_30min_R2 4 AAGGAPSPPPPVR 13 0 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR 168.61 5.69E-07 238296000 323446 309136 256845 343357 296596 288668 321673 240943 263499 304605 TRUE FALSE 348209.2744 293784.7558 265408.0841 315303.6348 284950.1508 299653.463 279436.9487 272435.0774 286417.6667 294665.7638 1.181709303 0.997010145 0.900708928 1.070038238 0.967028362 1.016926633 0.948318342 0.924556263 0.972008635 1 18.16871992 -4.769887732 4.641014099 0.974330798 1.196239798 0.651522466 0.045059669 0.112159625 5.595016453 0.011151522 0.081643853 1.70E-05 4.769887732 0.221909 AAGGGAGS(ph)SEDDAQSRR ddPTM_A459_MK2206_30min_R1 1 AAGGGAGSSEDDAQSRR 17 1 D6REM1;Q9H4A6 D6REM1 GOLPH3 Golgi phosphoprotein 3 1 AAGGGAGS(0.553)S(0.447)EDDAQSRR 67.902 0.019404 1084300 338.97 393.38 349.06 678.62 465.4 263.89 371.78 450.72 258.15 171.49 TRUE FALSE 310.1388215 367.7708905 325.3667797 730.88743 446.8621325 278.8312238 346.9792346 446.7794026 284.9856163 192.7354759 1.609142375 1.908163968 1.688152003 3.79217903 2.318525588 1.446704207 1.800287326 2.318096347 1.478636017 1 7.590478336 -8.479987278 3.546251289 1.003742729 2.118329761 0.251115826 0.627020271 0.306821121 8.589369222 0.639913781 0.168990133 3.31E-09 8.479987278 1.114587032 AAGGGAGSSEDDAQS(ph)R ddPTM_A459_MK2206_30min_R2 1 AAGGGAGSSEDDAQSR 16 0 D6REM1;Q9H4A6 D6REM1 GOLPH3 Golgi phosphoprotein 3 1 AAGGGAGSSEDDAQS(0.999)R 136.57 0.0005352 0 4313.6 2786.8 3327 3586.2 2771.1 2608.3 3297.5 2402.9 2789.1 2349.5 TRUE FALSE 4643.852533 2648.411564 3437.920519 3293.195988 2662.29269 2707.560684 2864.534289 2716.96728 3031.690876 2272.836007 2.043197361 1.165245339 1.51261266 1.448936913 1.171352742 1.191269707 1.260334789 1.195408411 1.333880168 1 11.15027788 -4.756739071 24.9935224 1.269282397 2.043198534 0.736406811 0.141495127 75.36852233 400718.1884 0.035377148 0.279581359 1.75E-05 4.756739071 0.773916137 AAGHPGDPESQQR ddPTM_A459_MK2206_30min_R1 1 AAGHPGDPESQQR 13 0 Q9Y490 Q9Y490 TLN1 Talin-1 0 96.334 0.02987 0 1177.9 1453.8 1815.1 966.89 1461.8 978.63 2382.3 2350 788.3 1956 FALSE TRUE 1077.71342 1359.157356 1691.896069 1041.360035 1403.573411 1034.039185 2223.381114 2329.454198 870.246606 2198.324047 0.490243202 0.618269794 0.769629969 0.473706339 0.638474302 0.470376142 1.011398259 1.059650055 0.39586821 1 11.10218835 -7.258454764 24.99995341 0.87169997 0.585553619 0.3520408 0.192440235 305.2455595 2556833.757 0.074099889 0.054855378 5.51E-08 7.258454764 -0.286146351 AAGHPGDPESQQR ddPTM_A459_MK2206_30min_R2 2 AAGHPGDPESQQR 13 0 Q9Y490 Q9Y490 TLN1 Talin-1 0 ; 109.72 0.0082023 4928800 16732 28671 34533 18053.6 23394 38917 21222 10680.3 40722 23446 FALSE TRUE 18013.01478 27247.23983 35684.31298 16578.56313 22475.43401 40398.01371 18435.52591 12076.25188 44263.92595 22680.95894 0.794191058 1.201326624 1.573315885 0.730946305 0.990938438 1.781142226 0.812819509 0.532440093 1.951589704 1 14.46919402 AAGISLIVPGKS(ph)PTR ddPTM_A459_MK2206_30min_R1 2 AAGISLIVPGKSPTR 15 1 P47736-4;F2Z357;J3KPC5;P47736;P47736-3 P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 AAGISLIVPGKS(0.775)PT(0.225)R;AAGIS(0.001)LIVPGKS(0.727)PT(0.272)R 113.11 0.013499 94378000 8459.2 7231.3 7299.2 5739.7 8302.8 7022.4 7027.3 6852.7 4981.6 4611.2 TRUE FALSE 7739.700619 6760.541056 6803.750641 6181.772689 7972.081895 7420.002219 6558.521639 6792.787566 5499.455147 5182.470269 1.493438499 1.304501658 1.3128393 1.19282357 1.538278366 1.43175008 1.26552036 1.310723885 1.061164823 1 12.33942422 -8.256493661 1.769061939 0.991336529 1.364048258 0.64307683 0.09830949 0.229004474 1.335490202 0.094746241 0.028204047 5.54E-09 8.256493661 0.37271173 AAGISLIVPGKS(ph)PTR ddPTM_A459_MK2206_30min_R2 2 AAGISLIVPGKSPTR 15 1 P47736-4;F2Z357;J3KPC5;P47736;P47736-3 P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 AAGISLIVPGKS(0.684)PT(0.316)R;AAGISLIVPGKS(0.933)PT(0.067)R 89.669 0.0089959 167676000 183268 207374 215134 216301 166023 163868 166266 137111 139289 138485 TRUE FALSE 197299.139 197076.1087 222306.4602 198628.5164 159504.1028 170104.1116 144435.0745 155031.8785 151404.1054 133966.2458 1.472752616 1.471087792 1.659421438 1.482675843 1.190629042 1.269753516 1.078145272 1.157245824 1.130166069 1 17.03151002 -6.296261753 2.538471313 1.136943248 1.537269723 0.848095244 0.080084854 0.110241357 1.402122412 0.026860298 0.033188327 5.06E-07 6.296261753 0.400326475 AAGMS(ph)SPGAQSHPEELPR ddPTM_A459_MK2206_30min_R1 1 AAGMSSPGAQSHPEELPR 18 0 M0R300;M0R0P8;Q13459-2;Q13459;M0QZY4;M0R2J3 M0R300 MYO9B Unconventional myosin-IXb 1 AAGMS(0.5)S(0.5)PGAQSHPEELPR 178.51 1.78E-09 4764700 2022.4 1653.9 1887.6 1383.2 2013.4 1920 2074.7 1903.9 1607 1449.3 TRUE FALSE 1850.38426 1546.230809 1759.474971 1489.734304 1933.202015 2028.708741 1936.300549 1887.254403 1774.053401 1628.850226 1.136006387 0.949277463 1.080194448 0.914592564 1.18685069 1.245485134 1.188752973 1.158642074 1.089144584 1 10.66963824 -6.283255162 24.78459235 1.159975336 1.019263169 0.331252777 0.085245991 727.3091031 826282.796 0.025444966 0.028875036 5.21E-07 6.283255162 -0.140712168 AAGMSS(ph)PGAQSHPEELPR ddPTM_A459_MK2206_30min_R1 1 AAGMSSPGAQSHPEELPR 18 0 M0R300;M0R0P8;Q13459-2;Q13459;M0QZY4;M0R2J3 M0R300 MYO9B Unconventional myosin-IXb 1 AAGMS(0.097)S(0.903)PGAQSHPEELPR 225.17 3.32E-15 6161200 2986.3 2832.6 2856 2287 3377.2 2820.4 3151.5 2719.8 2061.5 1949.5 TRUE FALSE 2732.299503 2648.197225 2662.142677 2463.145136 3242.678973 2980.088611 2941.269185 2696.021075 2275.800302 2191.018778 1.247045224 1.208660214 1.21502504 1.124200833 1.479986847 1.360138325 1.342420802 1.230487435 1.038695024 1 11.09738613 -10.32335427 8.166535925 1.000000074 1.255908786 0.288083086 0.117352726 1.73E-10 0 0.120035306 0.029112838 4.75E-11 10.32335427 0.255908712 AAGMSS(ph)PGAQSHPEELPR ddPTM_A459_MK2206_30min_R2 2 AAGMSSPGAQSHPEELPR 18 0 M0R300;M0R0P8;Q13459-2;Q13459;M0QZY4;M0R2J3 M0R300 MYO9B Unconventional myosin-IXb 1 AAGMS(0.192)S(0.808)PGAQSHPEELPR;AAGMS(0.008)S(0.992)PGAQSHPEELPR 268.42 6.83E-54 19536400 46540 60475 53223 71613 64850 76179 69639 45578.3 53661 63881 TRUE FALSE 50103.13818 57471.89944 54997.42826 65761.98882 62303.66315 79078.04523 60495.31565 51535.5403 58328.33678 61796.5682 0.810775414 0.930017655 0.889975445 1.064168946 1.008205876 1.27965108 0.978942964 0.833954729 0.943876634 1 15.9152391 -5.743640266 20.62208789 1.01779804 0.882231423 0.252113903 0.109246497 51.16150033 59270.60605 0.032600993 0.056158853 1.80E-06 5.743640266 -0.135566617 AAGS(ph)PSPLPAPDPAPK ddPTM_A459_MK2206_30min_R1 2 AAGSPSPLPAPDPAPK 16 0 J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2;J3KRF7 J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 1 AAGS(0.937)PS(0.063)PLPAPDPAPK;AAGS(0.937)PS(0.063)PLPAPDPAPK 226.39 4.75E-15 49905000 12147.8 12277.8 11991.2 9927.8 10770.9 9323.8 10474.6 9847.9 9886.2 8166.9 TRUE FALSE 11114.56582 11478.51299 11177.27075 10692.44088 10341.87225 9851.705499 9775.858546 9761.800849 10913.90587 9178.677229 1.210911501 1.250562875 1.217743088 1.164921765 1.126727957 1.073325192 1.065061806 1.063530246 1.189049968 1 13.16407054 -6.129328543 1.478368578 1.081445185 1.233072019 0.672677175 0.044999059 0.236943798 1.039082202 0.015851662 0.024569061 7.42E-07 6.129328543 0.151626835 AAGS(ph)PSPLPAPDPAPK ddPTM_A459_MK2206_30min_R2 2 AAGSPSPLPAPDPAPK 16 0 J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2;J3KRF7 J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 1 AAGS(0.991)PS(0.009)PLPAPDPAPK;AAGS(0.935)PS(0.065)PLPAPDPAPK 196.97 1.12E-06 59792000 236960 265638 262130 278077 251146 204579 259110 215024 224798 232399 TRUE FALSE 255101.8398 252446.8032 270869.2834 255357.2196 241284.7461 212364.3972 225088.5458 243128.3751 244350.5237 224815.8397 1.134714708 1.122904879 1.204849639 1.135850659 1.073255098 0.944614924 1.00121302 1.081455717 1.086891938 1 17.77838416 -6.360174844 3.397986633 1.025512991 1.15252473 0.646925604 0.043887488 0.17246926 3.757955388 0.015454896 0.017922099 4.36E-07 6.360174844 0.127011739 AAGS(ph)PSSSDQDEK ddPTM_A459_MK2206_30min_R2 1 AAGSPSSSDQDEK 13 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 AAGS(0.866)PS(0.047)S(0.047)S(0.041)DQDEK 153 0.00016179 0 13935 5784.8 6615.3 5822.6 6507.7 4363 9982.1 12192 5654.3 9606.1 TRUE FALSE 15001.87431 5497.535244 6835.8508 5346.874954 6252.174999 4529.037022 8671.438279 13785.53626 6146.100793 9292.653744 1.614379996 0.591600139 0.7356188 0.575387301 0.672808346 0.487378218 0.933149832 1.483487564 0.661393501 1 13.18187494 -7.519742593 24.96624509 1.08512804 0.751144195 0.102226889 0.349708297 240.7562884 1916660.6 0.156846967 0.092836712 3.02E-08 7.519742593 -0.333983845 AAGSPS(ph)PLPAPDPAPK ddPTM_A459_MK2206_30min_R2 4 AAGSPSPLPAPDPAPK 16 0 J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2;J3KRF7 J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 1 AAGS(0.002)PS(0.998)PLPAPDPAPK;AAGS(0.001)PS(0.999)PLPAPDPAPK;AAGS(0.08)PS(0.92)PLPAPDPAPK;AAGS(0.004)PS(0.996)PLPAPDPAPK 213.71 1.86E-08 61813000 602277 692760 672290 665920 708240 554566 693170 541725 585031 642830 TRUE FALSE 648387.7902 658358.5458 694703.8131 611512.2058 680430.939 575670.3977 602155.9464 612530.3175 635915.9389 621854.5097 1.042667987 1.058701892 1.117148468 0.983368612 1.094196357 0.925731644 0.968322874 0.98500583 1.022612088 1 19.24621756 -6.7539386 24.99983241 0.978646624 1.058192717 0.493466088 0.039934853 147.7362081 492399.2707 0.013148445 0.012906062 1.76E-07 6.7539386 0.079546093 AAGSPSSS(ph)DQDEK ddPTM_A459_MK2206_30min_R2 1 AAGSPSSSDQDEK 13 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 AAGS(0.16)PS(0.02)S(0.115)S(0.704)DQDEK 88.224 0.024082 3459800 11276 7544.2 7567.7 7391.4 6714.5 4657.8 10924 11423 7977.2 10535 TRUE FALSE 12139.29923 7169.565998 7820.003341 6787.498976 6450.854992 4835.055843 9489.665678 12916.02532 8671.042437 10191.24381 1.191149918 0.703502549 0.767325705 0.666012815 0.632980146 0.474432359 0.931158733 1.267364961 0.850832597 1 13.31504252 -7.514289707 24.80130362 1.055311665 0.728400936 0.326931789 0.195858827 406.6793366 1174319.184 0.087812626 0.053945965 3.06E-08 7.514289707 -0.326910729 AAHTEDINACT(ph)LTTSPR ddPTM_A459_MK2206_30min_R2 1 AAHTEDINACTLTTSPR 17 0 H7C155;P04049;P04049-2 H7C155 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 AAHTEDINACT(0.5)LT(0.3)T(0.1)S(0.1)PR 98.562 0.0069678 33794000 90303 98273 88531 94285 79145 92009 81856 56326 68772 63719 TRUE FALSE 97216.66711 93392.90572 91482.57935 86581.6139 76037.36963 95510.46697 71108.20887 63688.0016 74753.66425 61639.85425 1.577172242 1.515138328 1.484146588 1.404636902 1.23357478 1.549492096 1.153607674 1.033227647 1.212748881 1 15.91157583 -6.95379198 0.384963894 0.984999428 1.617177065 0.728229309 0.107111933 0.775687602 0.252140407 0.120637425 0.183415762 1.11E-07 6.95379198 0.632177637 AAHTEDINACTLT(ph)TSPR ddPTM_A459_MK2206_30min_R2 1 AAHTEDINACTLTTSPR 17 0 H7C155;P04049;P04049-2 H7C155 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 AAHTEDINACT(0.008)LT(0.331)T(0.331)S(0.331)PR 181.23 1.01E-07 32817000 88347 101150 84483 85112 65870 60723 60417 47838 53883 55089 TRUE FALSE 95110.91425 96127.03809 87299.62105 78158.07734 63283.61283 63033.85632 52484.17533 54090.59085 58569.64594 53291.45044 1.784731199 1.803798495 1.638154344 1.46661569 1.18750029 1.182813674 0.984851696 1.014995659 1.099043945 1 15.70161648 -6.048594662 0.986579459 1.026436371 1.835535076 0.978939004 0.045095158 0.072171707 0.143964741 0.019265452 0.039065296 8.94E-07 6.048594662 0.809098705 AAHTEDINACTLTT(ph)SPRLPVF ddPTM_A459_MK2206_30min_R2 1 AAHTEDINACTLTTSPRLPVF 21 1 H7C155;P04049;P04049-2 H7C155 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 AAHTEDINACT(0.262)LT(0.182)T(0.415)S(0.142)PRLPVF 54.855 0.046987 1494600 4154.3 6625.1 5780.6 6730 7192.2 6857.5 6987.4 4552.6 5674.7 4783.4 TRUE FALSE 4472.356402 6296.107168 5973.322319 6180.137472 6909.79809 7118.466968 6069.945987 5147.640451 6168.275148 4627.31805 0.966511563 1.360638517 1.29088216 1.335576549 1.493261975 1.538356969 1.311763298 1.112445783 1.333013007 1 12.17596055 -8.905998346 0.885059088 1.003431586 1.330719791 0.24438116 0.157951697 1.856040605 2.526431697 0.161755057 0.053711998 1.24E-09 8.905998346 0.327288206 AAHTEDINACTLTTS(ph)PR ddPTM_A459_MK2206_30min_R1 2 AAHTEDINACTLTTSPR 17 0 H7C155;P04049;P04049-2 H7C155 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 AAHTEDINACTLT(0.001)T(0.082)S(0.917)PR;AAHTEDINACT(0.004)LT(0.012)T(0.012)S(0.972)PR 169.15 1.06E-06 19489400 7156.1 7703.3 6800.2 5247.3 5677.5 5402.8 6691.2 4527.8 5664.5 5941.4 TRUE FALSE 6547.436117 7201.81377 6338.62137 5651.447955 5451.353153 5708.701867 6244.842257 4488.213922 6253.345046 6677.465487 0.980527137 1.078525046 0.949255579 0.846346262 0.816380581 0.85492046 0.935211461 0.672143335 0.936484817 1 12.7050849 -5.570521705 3.499373989 0.852866619 1.028672044 0.36061032 0.08637639 0.210780282 5.309673022 0.022753251 0.044488525 2.69E-06 5.570521705 0.175805425 AAHTEDINACTLTTS(ph)PRLPVF ddPTM_A459_MK2206_30min_R1 1 AAHTEDINACTLTTSPRLPVF 21 1 H7C155;P04049;P04049-2 H7C155 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 AAHTEDINACTLT(0.005)T(0.065)S(0.93)PRLPVF 134.15 2.25E-05 6985700 2086 1806.4 1493.2 1924.4 2096.9 1421.2 1117.1 1589.1 514.76 275.69 TRUE FALSE 1908.574746 1688.803032 1391.845744 2072.617621 2013.376033 1501.667116 1042.580297 1575.206666 568.2711441 309.8445586 6.159781391 5.450484719 4.492077417 6.689217429 6.498019659 4.846517631 3.364849466 5.083860997 1.834052361 1 8.275400822 -8.154219342 0.753864536 0.928313306 5.779577139 0.763173816 0.891142291 0.312494299 0.378437531 0.876119919 0.360830784 7.01E-09 8.154219342 4.851263833 AAHVPENS(ph)DTEQDVLTVKPVR ddPTM_A459_MK2206_30min_R1 4 AAHVPENSDTEQDVLTVKPVR 21 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 AAHVPENS(0.839)DT(0.161)EQDVLTVKPVR;AAHVPENS(0.976)DT(0.024)EQDVLTVKPVR;AAHVPENS(0.987)DT(0.013)EQDVLTVKPVR;AAHVPENS(0.967)DT(0.033)EQDVLTVKPVR 104.41 8.60E-05 32529900 9417 9422.9 9708.3 8438.8 10242.7 9508.5 10285.8 8948.6 9420.7 8463.68 TRUE FALSE 8616.034699 8809.467497 9049.327645 9088.757838 9834.71157 10046.86305 9599.65305 8870.363334 10400.01548 9512.224576 0.905785459 0.926120638 0.951336627 0.95548184 1.033902374 1.056205409 1.00919117 0.932522489 1.093331575 1 13.21556706 -5.98824546 2.167615694 1.018421649 0.924352313 0.526079431 0.04042871 0.263347859 2.488059782 0.012883781 0.020307183 1.03E-06 5.98824546 -0.094069336 AAHVPENS(ph)DTEQDVLTVKPVR ddPTM_A459_MK2206_30min_R2 6 AAHVPENSDTEQDVLTVKPVR 21 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 AAHVPENS(0.974)DT(0.026)EQDVLTVKPVR;AAHVPENS(0.992)DT(0.008)EQDVLTVKPVR;AAHVPENS(0.991)DT(0.009)EQDVLTVKPVR;AAHVPENS(0.949)DT(0.051)EQDVLTVKPVR;AAHVPENS(0.982)DT(0.018)EQDVLTVKPVR;AAHVPENS(0.832)DT(0.168)EQDVLTVKPVR 124.45 3.92E-05 111894100 261707 268830 256348 317876 297184 279523 315662 252285 245158 316060 TRUE FALSE 281743.4891 255480.2931 264894.5144 291904.514 285515.0629 290160.4436 274215.2002 285259.5157 266481.3997 305746.9881 0.92149228 0.835593818 0.866384706 0.954725722 0.933827884 0.949021429 0.89686967 0.932992071 0.871574897 1 18.22197876 -5.749286306 24.9968057 0.930406086 0.8706006 0.340156718 0.03770769 247.4266766 508909.9566 0.009808507 0.016825717 1.78E-06 5.749286306 -0.059805486 AAIPPPVYEEQDRPRS(ph)PTGPSNSFLANMGGTVAHK ddPTM_A459_MK2206_30min_R1 1 AAIPPPVYEEQDRPRSPTGPSNSFLANMGGTVAHK 35 2 H0Y6J6;Q5W012;Q96I25 H0Y6J6 RBM17 Splicing factor 45 1 AAIPPPVY(0.003)EEQDRPRS(0.936)PT(0.054)GPS(0.005)NS(0.002)FLANMGGTVAHK 84.938 4.96E-09 33371000 3407.4 2870.2 2950 3162.6 4332.6 3412.6 2916.2 3656.4 1657.1 1068.4 TRUE FALSE 3117.582737 2683.349458 2749.762219 3406.184 4160.023368 3605.818463 2721.665619 3624.43248 1829.361475 1200.761458 2.596338112 2.234706519 2.290015391 2.836686652 3.464487755 3.002943206 2.266616405 3.018445051 1.523501161 1 10.22973386 -8.416277992 3.87637344 1.01563092 2.70564506 0.712314846 0.375008939 0.125187939 3.157520725 0.396128451 0.104394702 3.83E-09 8.416277992 1.69001414 AAIPPPVYEEQDRPRS(ph)PTGPSNSFLANMGGTVAHK ddPTM_A459_MK2206_30min_R2 1 AAIPPPVYEEQDRPRSPTGPSNSFLANMGGTVAHK 35 2 H0Y6J6;Q5W012;Q96I25 H0Y6J6 RBM17 Splicing factor 45 1 AAIPPPVY(0.047)EEQDRPRS(0.859)PT(0.075)GPS(0.013)NS(0.005)FLANMGGTVAHK 74.476 2.66E-06 16877000 4788.5 24737 18294 23097 26824 23029 27124 12476 24567 17090 TRUE FALSE 5155.111242 23508.59655 18903.91283 21209.90122 25770.75498 23905.38473 23562.58622 14106.65604 26703.79325 16532.3547 0.31181954 1.421975089 1.143449507 1.282932867 1.558807287 1.445975795 1.425240787 0.85327567 1.615244394 1 14.0130046 -4.757556896 24.96383359 1.310949601 0.311818075 0.625027392 0.230791347 70.77305158 454995.636 0.055318646 0.406907662 1.75E-05 4.757556896 -0.999131525 AAIPPPVYEEQDRPRSPTGPS(ph)NSFLANMGGTVAHK ddPTM_A459_MK2206_30min_R1 1 AAIPPPVYEEQDRPRSPTGPSNSFLANMGGTVAHK 35 2 H0Y6J6;Q5W012;Q96I25 H0Y6J6 RBM17 Splicing factor 45 1 AAIPPPVY(0.017)EEQDRPRS(0.159)PT(0.159)GPS(0.325)NS(0.325)FLANMGGT(0.015)VAHK 41.035 0.020982 26628000 1120.7 981.14 1239.8 1406.7 1795.3 1076.6 1391.4 1278.6 656.86 456.31 TRUE FALSE 1025.37858 917.2676077 1155.64583 1515.044278 1723.789399 1137.556162 1298.582245 1267.421335 725.1429476 512.8411278 1.999407856 1.788599935 2.253418784 2.954217585 3.361254209 2.218145348 2.532133588 2.471372256 1.413971907 1 9.002368155 -5.409725454 5.169419028 2.40711123 1.903276028 0.026100268 0.652511316 0.561822124 21.60983828 0.171734211 0.366689336 3.89E-06 5.409725454 -0.503835202 AAISQLRS(ph)PR ddPTM_A459_MK2206_30min_R2 1 AAISQLRSPR 10 1 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 AAIS(0.001)QLRS(0.999)PR 73.632 0.035557 6554600 18417 27210 18766 26727 23310 25436 24296 17786 20995 24330 TRUE FALSE 19827.01968 25858.79097 19391.64907 24543.3186 22394.73228 26403.9848 21105.90602 20110.69127 22821.10715 23536.11409 0.842408377 1.098685657 0.823910396 1.042794002 0.951505087 1.121849796 0.896745569 0.854460987 0.969620858 1 14.52258852 -8.542306098 21.51663742 1.00000002 0.958020386 0.018214577 0.099843171 3767.911746 4173132.8 0.092472716 0.023876353 2.87E-09 8.542306098 -0.041979633 AAITMQRYVRGY(ph)QARCY(ph)AK ddPTM_A459_MK2206_30min_R1 1 AAITMQRYVRGYQARCYAK 19 3 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3 A0A087WY00 MYO5A Unconventional myosin-Va 2 AAIT(0.015)MQRY(0.222)VRGY(0.864)QARCY(0.899)AK 40.962 0.046453 0 655.56 734.66 813.42 772.69 832.03 835.84 700.17 706.73 621.15 671.48 TRUE FALSE 599.8011795 686.8335005 758.2073167 832.2027177 798.8884832 883.1645385 653.4629368 700.5511341 685.7207653 754.6680118 0.794788132 0.91011344 1.004689883 1.102740152 1.058595927 1.170268946 0.865894574 0.928290484 0.90863897 1 9.559698314 -4.944616209 2.404067186 1.008504763 0.780927656 0.368647953 0.086355108 0.46438553 4.305680981 0.025304849 0.192444687 1.14E-05 4.944616209 -0.227577107 AAKLS(ph)EGS(ph)QPAEEEEDQETPSR ddPTM_A459_MK2206_30min_R2 1 AAKLSEGSQPAEEEEDQETPSR 22 1 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 AAKLS(1)EGS(1)QPAEEEEDQETPSR 65.598 0.013484 8707700 13619 22711 21128 17203 19869 18556 26767 22824 20107 24511 TRUE FALSE 14661.68111 21583.20476 21832.39697 15797.45987 19088.84323 19262.16158 23252.46075 25807.17517 21855.87051 23711.20808 0.61834391 0.910253273 0.920762742 0.666244411 0.8050557 0.812365254 0.980652722 1.088395626 0.921752719 1 14.53328155 -7.271434259 3.860381151 1.009128934 0.793622683 0.536062882 0.095369311 0.184216506 6.301091974 0.040894863 0.028365536 5.35E-08 7.271434259 -0.215506251 AAKLS(ph)EGSQPAEEEEDQETPSR ddPTM_A459_MK2206_30min_R1 4 AAKLSEGSQPAEEEEDQETPSR 22 1 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 AAKLS(0.973)EGS(0.027)QPAEEEEDQETPSR;AAKLS(0.913)EGS(0.085)QPAEEEEDQET(0.002)PS(0.001)R;AAKLS(0.973)EGS(0.027)QPAEEEEDQETPSR;AAKLS(0.996)EGS(0.004)QPAEEEEDQETPSR 118.04 1.82E-05 49815800 7274.14 8451.9 9179.9 8263 8604.61 7645.34 9225.1 11804.3 8450.76 5837.25 TRUE FALSE 6655.436195 7901.679774 8556.793965 8899.417692 8261.870163 8078.212544 8609.710411 11701.09625 9329.246743 6560.412599 1.014484393 1.204448601 1.304307288 1.35653323 1.259352219 1.231357391 1.312373312 1.783591515 1.42205183 1 12.67957084 -7.536743471 24.99621884 1.471289505 1.240825853 0.103722765 0.198109924 361.5729144 651858.7617 0.089268361 0.051569152 2.91E-08 7.536743471 -0.230463652 AAKLS(ph)EGSQPAEEEEDQETPSR ddPTM_A459_MK2206_30min_R2 3 AAKLSEGSQPAEEEEDQETPSR 22 1 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 AAKLS(0.991)EGS(0.009)QPAEEEEDQETPSR;AAKLS(0.871)EGS(0.129)QPAEEEEDQETPSR;AAKLS(0.705)EGS(0.277)QPAEEEEDQET(0.014)PS(0.004)R 103.04 5.08E-05 35820000 36121.3 55997 47978 60782 47507 56875 81127 76534 80669 64439 TRUE FALSE 38886.7745 53216.27041 49577.56257 55815.91617 45641.63648 59039.41798 70474.92745 86537.25658 87685.4438 62336.36071 0.6238217 0.853695497 0.79532334 0.895399018 0.732183207 0.947110439 1.130558901 1.388230811 1.406650032 1 15.92778631 -7.25907609 2.091143829 1.294103451 0.79250606 0.734987383 0.128001693 0.155736182 1.331124281 0.061366022 0.039509233 5.51E-08 7.25907609 -0.50159739 AAKLSEGS(ph)QPAEEEEDQETPSR ddPTM_A459_MK2206_30min_R2 1 AAKLSEGSQPAEEEEDQETPSR 22 1 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 AAKLS(0.405)EGS(0.568)QPAEEEEDQET(0.021)PS(0.006)R 61.139 0.0075063 9870900 8332.9 18225 15107 18166 17971 12194 25486 20297 24763 18311 TRUE FALSE 8970.873231 17319.973 15610.65984 16681.77969 17265.36824 12658.05121 22139.65759 22949.88759 26916.84098 17713.51357 0.506442338 0.977783032 0.881285341 0.94175442 0.974700371 0.714598556 1.24987386 1.295614645 1.519565324 1 14.11256279 -7.333079268 6.219121112 1.296162394 0.853414913 0.583990778 0.178169153 0.166891553 11.57043279 0.072936084 0.04891155 4.64E-08 7.333079268 -0.442747482 AAKNS(ph)EEEEEEK ddPTM_A459_MK2206_30min_R1 2 AAKNSEEEEEEK 12 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK 167.61 0.0020044 24713300 7730.7 7243.9 5400.05 7028.3 1288.96 1826.21 5050.88 7533.9 1192.21 5373.32 TRUE FALSE 7073.163369 6772.320793 5033.509651 7569.620884 1237.617994 1929.608432 4713.945011 7468.031907 1316.144496 6039.007448 1.171246009 1.121429449 0.833499494 1.253454471 0.204937319 0.319524102 0.780582745 1.236632339 0.217940532 1 12.56009574 -6.239399146 24.93928272 0.630779463 1.078129807 0.328046917 0.327964688 1038.112731 1174660.125 0.099534319 0.128394064 5.76E-07 6.239399146 0.447350344 AAKNS(ph)EEEEEEK ddPTM_A459_MK2206_30min_R2 4 AAKNSEEEEEEK 12 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK 186.08 0.00051315 199505000 245994 124973 156839 106215 121809 67860.1 171633 246044 121966 225273 TRUE FALSE 264827.4898 118767.0225 162067.934 97536.89474 117026.1666 70442.56366 149097.3809 278202.7956 132574.3822 217922.3605 1.215237799 0.544996953 0.743695753 0.44757635 0.537008531 0.323246148 0.684176606 1.276614272 0.608356031 1 17.73345471 -7.546829752 24.70734168 0.961570482 0.61316601 0.226871878 0.269618019 281.6572531 290547.466 0.123939773 0.071561151 2.84E-08 7.546829752 -0.348404472 AAKPGPAEAPS(ph)PT(ph)ASPSGDASPPATAPYDPR ddPTM_A459_MK2206_30min_R2 1 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 AAKPGPAEAPS(0.87)PT(0.356)AS(0.287)PS(0.192)GDAS(0.256)PPAT(0.031)APY(0.008)DPR 50.593 0.047631 9975400 24446 32612 26734 38834 34994 32469 33726 28721 32954 30540 TRUE FALSE 26317.60456 30992.5355 27625.29822 35661.13798 33619.95973 33704.63055 29297.73569 32474.93331 35820.27935 29543.4823 0.890809157 1.049048152 0.935072512 1.207072938 1.137982293 1.140848266 0.991681867 1.099224966 1.212459621 1 14.85055227 -5.74614471 24.99853995 1.114064475 0.967383722 0.447970138 0.078362507 232.8991016 380661.5306 0.021135153 0.036431756 1.79E-06 5.74614471 -0.146680753 AAKPGPAEAPS(ph)PTASPS(ph)GDASPPATAPYDPR ddPTM_A459_MK2206_30min_R2 1 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 AAKPGPAEAPS(0.69)PT(0.262)AS(0.064)PS(0.643)GDAS(0.247)PPAT(0.057)APY(0.037)DPR 54.09 0.0079196 13297000 11531 15681 16467 18544 16785 17328 15293 14586 14256 15482 TRUE FALSE 12413.82223 14902.30434 17016.00156 17028.89588 16125.93656 17987.42918 13285.01073 16492.44028 15495.96111 14976.82361 0.828868828 0.995024361 1.13615557 1.137016521 1.076726079 1.201017629 0.887037938 1.101197471 1.034662724 1 13.87044406 -4.847712037 3.118392014 1.075686997 0.809114494 0.445645111 0.082003077 0.275515278 4.320886583 0.020752029 0.167482443 1.42E-05 4.847712037 -0.266572503 AAKPGPAEAPS(ph)PTASPSGDASPPATAPYDPR ddPTM_A459_MK2206_30min_R1 1 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 AAKPGPAEAPS(0.726)PT(0.245)AS(0.022)PS(0.006)GDAS(0.001)PPATAPYDPR 83.693 1.87E-06 54849000 1325.6 1384 1304.2 1099.9 1585.1 1299.4 1227.5 1201.6 1186.6 989.17 TRUE FALSE 1212.850759 1293.901348 1215.674538 1184.614489 1521.96211 1372.970905 1145.615715 1191.094538 1309.951316 1111.715847 1.090971908 1.163877758 1.093511926 1.065573088 1.369020792 1.235001649 1.030493284 1.07140196 1.178314872 1 10.11857237 -9.238783916 0.60585986 0.996013565 1.154201604 0.167410531 0.095210952 5.115985405 2.73403888 0.173728725 0.042783025 5.77E-10 9.238783916 0.158188039 AAKPGPAEAPSPT(ph)ASPSGDASPPATAPYDPR ddPTM_A459_MK2206_30min_R1 3 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 AAKPGPAEAPS(0.157)PT(0.832)AS(0.009)PS(0.001)GDASPPATAPYDPR;AAKPGPAEAPS(0.063)PT(0.912)AS(0.01)PS(0.015)GDAS(0.001)PPATAPYDPR;AAKPGPAEAPS(0.036)PT(0.938)AS(0.025)PS(0.001)GDASPPATAPYDPR 99.641 4.06E-08 210387000 6111.4 6080.6 6062.4 5484.7 6241.5 5570.8 5920 5223.5 4990.5 4952 TRUE FALSE 5591.593338 5684.751835 5650.901179 5907.132544 5992.887838 5886.213882 5525.087602 5177.83149 5509.280334 5565.491146 1.004690007 1.021428601 1.01534636 1.061385669 1.076794066 1.057627032 0.992740345 0.930345832 0.989900117 1 12.44229329 -7.440066869 4.857227098 0.968486041 1.039922615 0.557958505 0.026967316 0.163858204 6.732815664 0.012679116 0.008245997 3.63E-08 7.440066869 0.071436574 AAKPGPAEAPSPT(ph)ASPSGDASPPATAPYDPR ddPTM_A459_MK2206_30min_R2 2 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 AAKPGPAEAPS(0.033)PT(0.821)AS(0.102)PS(0.037)GDAS(0.007)PPAT(0.001)APYDPR;AAKPGPAEAPS(0.238)PT(0.757)AS(0.005)PSGDASPPATAPYDPR 100.86 3.05E-08 198806000 172354 216816 208360 226070 205095 197026 226550 177349 178120 205811 TRUE FALSE 185549.5548 206049.2327 215306.6184 207599.3578 197041.9398 204523.9625 196803.7129 200529.1232 193612.5556 199095.4039 0.931963024 1.034927119 1.081424353 1.042712959 0.989686029 1.027266117 0.988489483 1.007201167 0.972461201 1 17.60310039 -7.16514897 1.298869382 0.990559642 1.023892233 0.084592884 0.037687728 1.087297498 3.632986115 0.02364132 0.014853732 6.84E-08 7.16514897 0.033332591 AAKPGPAEAPSPTASPSGDAS(ph)PPATAPYDPR ddPTM_A459_MK2206_30min_R2 3 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 AAKPGPAEAPSPTASPS(0.001)GDAS(0.972)PPAT(0.021)APY(0.006)DPR;AAKPGPAEAPSPTASPS(0.098)GDAS(0.58)PPAT(0.238)APY(0.083)DPR;AAKPGPAEAPSPTASPS(0.004)GDAS(0.899)PPAT(0.072)APY(0.025)DPR 139.15 1.20E-18 209748000 94465 120620 106502 133807 118800 116798 122607 99994 110612 117448 TRUE FALSE 101697.313 114630.1862 110052.7235 122874.5401 114135.3151 121242.8297 106508.5536 113063.5591 120232.8318 113615.6814 0.895099266 1.008929268 0.968640263 1.081492789 1.004573609 1.067131124 0.937445891 0.99514044 1.058241524 1 16.79380245 -3.9251973 1.453680693 1.015734933 3.30E-14 0.409714997 0.042456311 12.59316261 3.653096091 0.011831871 33.47275614 0.000118796 3.9251973 -1.015734933 AALAPAKES(ph)PR ddPTM_A459_MK2206_30min_R1 2 AALAPAKESPR 11 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AALAPAKES(1)PR;AALAPAKES(1)PR 156 0.002571 1163760000 17589.4 19326.2 19167.3 16871.3 18086.8 15886.7 17359.4 17096.6 15729.2 14195.7 TRUE FALSE 16093.32916 18068.06087 17866.27708 18170.73045 17366.36446 16786.19122 16201.3861 16947.12623 17364.30663 15954.37049 1.008709756 1.132483471 1.119835915 1.138918672 1.088502017 1.052137484 1.01548263 1.062224689 1.088373035 1 13.96166406 -6.707900792 3.738401533 1.045213281 1.1045927 0.306601367 0.040641831 0.282691445 8.062495746 0.014249041 0.01376059 1.96E-07 6.707900792 0.059379419 AALAPAKES(ph)PR ddPTM_A459_MK2206_30min_R2 7 AALAPAKESPR 11 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR 161.87 0.0028099 1778107000 2864298 3394640 3029841 3237992 3230102 2610638 3508688 2607278 2581653 3011093 TRUE FALSE 3083590.857 3226067.114 3130854.387 2973437.696 3103271.966 2709987.658 3047993.051 2948058.187 2806200.511 2912841.282 1.058619595 1.107532749 1.074845515 1.020803198 1.065376265 0.930358848 1.046398604 1.012090224 0.963389433 1 21.47399566 -6.077188114 1.253694417 0.997022171 1.085820224 0.486831315 0.036520356 0.38937785 1.245242467 0.01356954 0.023602515 8.37E-07 6.077188114 0.088798053 AALEEVYPDLTPEETRR ddPTM_A459_MK2206_30min_R2 1 AALEEVYPDLTPEETRR 17 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 0 94.45 0.0091883 1972800 6794.1 8543.9 7161.9 11081 10155 9722.1 6527.4 7310.2 6369.6 5532.7 FALSE TRUE 7314.26152 8119.62235 7400.674171 10175.64685 9756.263675 10092.08133 5670.344539 8265.66824 6923.616294 5352.168452 1.366597779 1.517071524 1.382743133 1.901219467 1.822861848 1.885606071 1.05944807 1.544358761 1.293609563 1 12.38590781 -8.316978729 0.848313484 1.023194082 1.615805004 0.373228718 0.241337478 0.672159914 1.055107932 0.243986483 0.090409973 4.82E-09 8.316978729 0.592610922 AALEQPCEGS(ph)LTRPK ddPTM_A459_MK2206_30min_R1 3 AALEQPCEGSLTRPK 15 1 D6RGY3;D6R960;Q6PUV4 D6RGY3 CPLX2 Complexin-2 1 AALEQPCEGS(0.982)LT(0.018)RPK;AALEQPCEGS(0.991)LT(0.009)RPK;AALEQPCEGS(0.971)LT(0.029)RPK 216.71 1.65E-08 102680000 20495.5 15845.6 12705.7 11445.9 12198.5 9140.1 10886.7 10632 10879 9824.6 TRUE FALSE 18752.2501 14814.04856 11843.27248 12327.4652 11712.60791 9657.604563 10160.46811 10539.04554 12009.91098 11041.74562 1.698304846 1.341640088 1.072590593 1.116441696 1.060756905 0.874644725 0.920186758 0.954472772 1.087682274 1 13.43068065 -3.67005321 0.722265644 0.970937678 4.739652532 0.920466327 0.065033065 3.182373541 0.373027414 0.026971344 14.13312938 0.00021377 3.67005321 3.768714855 AALEQPCEGS(ph)LTRPK ddPTM_A459_MK2206_30min_R2 3 AALEQPCEGSLTRPK 15 1 D6RGY3;D6R960;Q6PUV4 D6RGY3 CPLX2 Complexin-2 1 AALEQPCEGS(0.915)LT(0.085)RPK;AALEQPCEGS(0.755)LT(0.245)RPK;AALEQPCEGS(0.831)LT(0.169)RPK 97.776 0.0051194 144066000 431368 414957 342085 342732 275075 265787 330955 276727 235540 312695 TRUE FALSE 464393.8657 394350.8388 353489.9432 314729.6993 264274.1734 275901.7105 287500.211 312896.169 256026.8434 302491.7878 1.535228011 1.303674529 1.16859352 1.040457004 0.873657349 0.912096532 0.950439723 1.034395583 0.846392708 1 18.20653645 -5.111549846 1.005795518 0.935273399 1.657354029 0.917026096 0.058713 0.316607724 0.369344022 0.020561839 0.219706822 7.73E-06 5.111549846 0.72208063 AALEQPCEGSLT(ph)RPK ddPTM_A459_MK2206_30min_R1 1 AALEQPCEGSLTRPK 15 1 D6RGY3;D6R960;Q6PUV4 D6RGY3 CPLX2 Complexin-2 1 AALEQPCEGS(0.175)LT(0.825)RPK 202.01 0.00014506 69837000 7848.8 6034.1 5664.9 4504.1 4406.5 3602.6 4321.4 3927.9 3486.1 3024.8 TRUE FALSE 7181.218344 5641.278993 5280.382371 4851.006562 4230.979774 3806.576099 4033.127291 3893.558784 3848.49257 3399.53506 2.112411909 1.659426626 1.553266043 1.426961769 1.244576008 1.119734326 1.186376142 1.145320968 1.132064386 1 11.73112173 -1.522878745 0.356529914 1.058217957 13.86904077 0.971752914 0.053845324 9.457130654 0.132419342 0.045572657 81.95092129 0.03 1.522878745 12.81082282 up AALEQPCEGSLT(ph)RPK ddPTM_A459_MK2206_30min_R2 2 AALEQPCEGSLTRPK 15 1 D6RGY3;D6R960;Q6PUV4 D6RGY3 CPLX2 Complexin-2 1 AALEQPCEGS(0.02)LT(0.98)RPK;AALEQPCEGS(0.087)LT(0.913)RPK 102.57 0.0085955 391138000 104348 113970 91754 90955 77436 54500 75374 55600 62301 82692 TRUE FALSE 112336.9631 108310.4155 94813.03257 83523.68555 74395.47356 56574.03569 65477.30326 62867.1109 67719.82837 79993.76681 1.404321456 1.35398569 1.185255256 1.044127422 0.930015881 0.70723055 0.818530066 0.78590012 0.846563814 1 16.28759997 -5.765698344 1.166165589 0.817776598 1.413340144 0.892836633 0.07446203 0.149998162 0.398065191 0.026496045 0.071255679 1.72E-06 5.765698344 0.595563547 AALHS(ph)PVSEGAPVIPPSSGLPLPTPDAR ddPTM_A459_MK2206_30min_R2 1 AALHSPVSEGAPVIPPSSGLPLPTPDAR 28 0 E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5;Q9NRA0-3 E9PCV4 SPHK2 Sphingosine kinase 2 1 AALHS(0.998)PVS(0.002)EGAPVIPPSSGLPLPTPDAR 100.66 3.88E-07 4324600 12537 16889 14049 16259 17476 16965 16783 11651 12354 15055 TRUE FALSE 13496.84236 16050.31682 14517.38665 14930.58769 16789.80443 17610.61496 14579.37194 13173.8257 13428.52859 14563.75658 0.926741825 1.102072582 0.996816073 1.025187946 1.152848466 1.209208274 1.001072207 0.904562338 0.922051156 1 13.83009491 -7.520408829 21.92209354 0.938547285 1.071909615 0.35013609 0.077724514 22.86258694 202956.2032 0.037574657 0.022286832 3.02E-08 7.520408829 0.13336233 AALPSLTNPPS(ph)LSPIRR ddPTM_A459_MK2206_30min_R2 1 AALPSLTNPPSLSPIRR 17 1 P42858 P42858 HTT Huntingtin 1 AALPSLTNPPS(0.544)LS(0.456)PIRR 68.952 0.01817 5329600 23189 20557 21079 16872 16516 15283 20296 13960 13072 20939 TRUE FALSE 24964.36767 19536.16927 21781.76334 15493.50363 15867.49885 15864.60527 17631.11082 15784.61993 14208.97893 20255.76214 1.232457584 0.964474658 1.075336647 0.76489364 0.783357286 0.783214434 0.87042446 0.779265664 0.701478366 1 14.30604475 -5.031488044 0.940209316 0.801028891 1.312037677 0.616599573 0.098990613 0.942571694 0.8608026 0.033676019 0.453198917 9.30E-06 5.031488044 0.511008785 AALPSLTNPPSLS(ph)PIR ddPTM_A459_MK2206_30min_R2 2 AALPSLTNPPSLSPIR 16 0 P42858 P42858 HTT Huntingtin 1 AALPSLT(0.008)NPPS(0.39)LS(0.602)PIR;AALPSLT(0.001)NPPS(0.25)LS(0.748)PIR 124.04 0.0013187 8309200 25632 26374.2 24747.8 23931.8 32416 26667 27059 22004.9 27135 27183 TRUE FALSE 27594.40563 25064.49558 25572.8793 21976.49539 31143.18496 27681.83137 23506.1208 24881.01598 29495.15325 26296.02094 1.04937571 0.953166855 0.97249996 0.835734632 1.184330703 1.052700385 0.893904095 0.946189389 1.121658418 1 14.68255689 -6.237906232 24.994673 1.024457188 0.954142766 0.153648298 0.091104978 1882.155912 1999047.166 0.028070809 0.036216526 5.78E-07 6.237906232 -0.070314422 AAMYDIIS(ph)SPSKDSTK ddPTM_A459_MK2206_30min_R1 2 AAMYDIISSPSKDSTK 16 1 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 AAMYDIIS(0.5)S(0.5)PSKDSTK;AAMYDIIS(0.499)S(0.499)PS(0.002)KDSTK 196.95 5.31E-06 93297000 7947.1 8223.4 8467.8 8257.1 6832.8 5460.6 6344.1 7115.7 6828.8 6740.6 TRUE FALSE 7271.157413 7688.055165 7893.029329 8893.063273 6560.635107 5769.774453 5920.896664 7053.488185 7538.678197 7575.676417 0.959803061 1.014834154 1.041891033 1.173896928 0.866013112 0.761618387 0.781566733 0.931070415 0.995116183 1 12.88715899 -6.292535915 24.69463153 0.87402047 1.044857201 0.424064687 0.089348418 556.968974 442303.054 0.029512308 0.033467145 5.10E-07 6.292535915 0.170836731 AAMYDIISS(ph)PSKDSTK ddPTM_A459_MK2206_30min_R1 1 AAMYDIISSPSKDSTK 16 1 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 AAMYDIIS(0.257)S(0.737)PS(0.006)KDSTK 220.59 3.78E-10 16846000 4043.1 4294.2 4136.6 4174.5 2916.4 2420.8 2892.5 3520.5 3450.9 2872.2 TRUE FALSE 3699.213114 4014.646799 3855.819117 4496.020713 2800.233612 2557.863604 2699.546603 3489.72064 3809.633404 3228.02982 1.145966215 1.243683306 1.194480637 1.392806437 0.867474518 0.792391566 0.836283044 1.081068278 1.180172928 1 11.65643819 -6.270017793 24.99525994 0.949095689 1.240640983 0.561049095 0.123128918 509.6749665 1485057.338 0.041767731 0.04809298 5.37E-07 6.270017793 0.291545294 AAMYDIISS(ph)PSKDSTK ddPTM_A459_MK2206_30min_R2 2 AAMYDIISSPSKDSTK 16 1 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 AAMYDIIS(0.143)S(0.84)PS(0.017)KDSTK;AAMYDIIS(0.395)S(0.604)PS(0.001)KDSTK 107.57 0.0018124 84090000 120146 125342 125059 119319 120874 87831 154086 112386 91489 141250 TRUE FALSE 129344.4701 119117.6985 129228.4046 109570.256 116127.8794 91173.47025 133854.3231 127075.2361 99446.54785 136641.0241 0.946600562 0.871756483 0.945751143 0.801884037 0.849875652 0.667248148 0.979605679 0.929993294 0.727794222 1 17.06003117 -5.754238306 24.96320631 0.845663577 0.916408104 0.091959002 0.100148757 415.9454488 1441898.683 0.027065771 0.045646388 1.76E-06 5.754238306 0.070744527 AANMLQQS(ph)GSK ddPTM_A459_MK2206_30min_R1 1 AANMLQQSGSK 11 0 P46063 P46063 RECQL ATP-dependent DNA helicase Q1 1 AANMLQQS(0.997)GS(0.003)K 118.76 0.0041589 0 1825.9 1670.9 1667.1 1648.3 1366.2 1251.2 1593.3 1283.2 1174.7 1604.6 TRUE FALSE 1670.597617 1562.124106 1553.941897 1775.252352 1311.781361 1322.041863 1487.013864 1271.981118 1296.814269 1803.389962 0.926365152 0.866215372 0.861678245 0.984397379 0.727397506 0.73308707 0.824565898 0.705327824 0.719098085 1 10.81649568 -6.271929602 24.96384702 0.769570495 0.903133006 0.319644003 0.087253359 748.0258685 1780092.474 0.025575972 0.02929603 5.35E-07 6.271929602 0.133562511 AANQVEETLHTHLPQT(ph)PETNFR ddPTM_A459_MK2206_30min_R1 1 AANQVEETLHTHLPQTPETNFR 22 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 AANQVEETLHTHLPQT(0.977)PET(0.023)NFR 120.92 2.56E-05 6725800 1846.8 1485.6 1744.8 1692 1999.2 1751.4 2124.5 1786.7 1633.6 1578.2 TRUE FALSE 1689.719962 1388.88717 1626.367837 1822.318133 1919.567631 1850.562754 1982.778481 1771.07907 1803.418566 1773.719331 0.952642243 0.783036609 0.916925135 1.027399376 1.082227384 1.043323328 1.117864843 0.998511455 1.016744044 1 10.79256202 -5.697967111 3.392170691 1.04725645 0.864398655 0.665392042 0.051545622 0.124213432 2.866699099 0.014086533 0.025356014 2.00E-06 5.697967111 -0.182857795 AANQVEETLHTHLPQT(ph)PETNFR ddPTM_A459_MK2206_30min_R2 1 AANQVEETLHTHLPQTPETNFR 22 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 AANQVEETLHTHLPQT(0.954)PET(0.046)NFR 73.654 0.0017707 5340400 17416 20532 18575 20992 18120 21091 21395 12368 20749 17428 TRUE FALSE 18749.38235 19512.41074 19194.28123 19276.88645 17408.51775 21893.63278 18585.8108 13984.54007 22553.71051 16859.32579 1.112107482 1.157366017 1.138496371 1.143396046 1.032574966 1.298606662 1.102405341 0.829483945 1.337758745 1 14.04125922 -14.52287874 0.160725096 0.555168336 1.153986448 0.06077959 0.132948412 389.799487 3.578476819 55.52962742 0.540953609 3.00E-15 14.52287874 0.598818112 AAPAQVRPPS(ph)PGNIRPVK ddPTM_A459_MK2206_30min_R1 2 AAPAQVRPPSPGNIRPVK 18 2 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AAPAQVRPPS(1)PGNIRPVK;AAPAQVRPPS(1)PGNIRPVK 89.659 0.0068281 219330000 2944.7 3432.3 3099.5 2499.8 2887.2 3054.8 3611.8 2359.8 3159.4 3454.7 TRUE FALSE 2694.237802 3208.856646 2889.114576 2692.335029 2772.19671 3227.760136 3370.863412 2339.168517 3487.830936 3882.694318 0.693909327 0.826451011 0.744100447 0.693419262 0.713987887 0.831319664 0.868176358 0.602460128 0.898301708 1 11.92284241 -8.516087687 22.74640665 1.000000009 0.753115251 0.556489419 0.074907449 91.49253211 306449.1617 0.071144286 0.018369376 3.05E-09 8.516087687 -0.246884758 AAPEAS(ph)SPPAS(ph)PLQHLLPGK ddPTM_A459_MK2206_30min_R1 7 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 2 AAPEAS(0.501)S(0.501)PPAS(0.998)PLQHLLPGK;AAPEAS(0.5)S(0.5)PPAS(1)PLQHLLPGK;AAPEAS(0.5)S(0.5)PPAS(1)PLQHLLPGK;AAPEAS(0.5)S(0.5)PPAS(1)PLQHLLPGK;AAPEAS(0.501)S(0.501)PPAS(0.999)PLQHLLPGK;AAPEAS(0.5)S(0.5)PPAS(1)PLQHLLPGK;AAPEAS(0.811)S(0.19)PPAS(0.998)PLQHLLPGK 146.19 9.87E-05 172229000 88066.1 89390.9 85093.2 73483.9 82875.3 72164.7 73420.6 72150.1 64440.9 59723.9 TRUE FALSE 80575.61574 83571.53616 79317.31067 79143.64271 79574.20131 76250.60295 68522.84574 71519.29928 71139.76216 67122.94762 1.200418316 1.245051642 1.181672043 1.179084732 1.185499209 1.135984125 1.020855731 1.065496999 1.059842642 1 16.03451845 -7.014341482 2.217229826 1.040644765 1.200935789 0.899466659 0.025408753 0.096476854 0.949151985 0.011321568 0.0088123 9.68E-08 7.014341482 0.160291024 AAPEAS(ph)SPPAS(ph)PLQHLLPGK ddPTM_A459_MK2206_30min_R2 10 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 2 AAPEAS(0.503)S(0.503)PPAS(0.993)PLQHLLPGK;AAPEAS(0.5)S(0.5)PPAS(1)PLQHLLPGK;AAPEAS(0.786)S(0.214)PPAS(1)PLQHLLPGK;AAPEAS(0.5)S(0.5)PPAS(1)PLQHLLPGK;AAPEAS(0.505)S(0.505)PPAS(0.989)PLQHLLPGK;AAPEAS(0.5)S(0.5)PPAS(1)PLQHLLPGK;AAPEAS(0.531)S(0.531)PPAS(0.937)PLQHLLPGK;AAPEAS(0.92)S(0.08)PPAS(1)PLQHLLPGK;AAPEAS(0.504)S(0.504)PPAS(0.993)PLQHLLPGK;AAPEAS(0.603)S(0.603)PPAS(0.795)PLQHLLPGK 166.52 6.12E-08 116291700 370923.8 459472.1 375038.5 446465.8 405110.5 352222.7 367066.7 305758.6 315097.7 324296.4 TRUE FALSE 399322.0113 436655.3836 387542.0964 409988.116 389203.8263 365626.7817 318870.4014 345722.2988 342504.3284 313714.635 1.272882954 1.391887196 1.235333176 1.306882339 1.240630123 1.165475693 1.016434574 1.102027959 1.091770323 1 18.25909331 -6.833081376 1.710622179 1.058841461 1.304589753 0.84301438 0.048450788 0.134233554 0.810594641 0.020706721 0.017869527 1.47E-07 6.833081376 0.245748292 AAPEAS(ph)SPPASPLQHLLPGK ddPTM_A459_MK2206_30min_R1 5 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 AAPEAS(0.842)S(0.152)PPAS(0.006)PLQHLLPGK;AAPEAS(0.508)S(0.095)PPAS(0.398)PLQHLLPGK;AAPEAS(0.857)S(0.143)PPASPLQHLLPGK;AAPEAS(0.748)S(0.172)PPAS(0.08)PLQHLLPGK;AAPEAS(0.978)S(0.018)PPAS(0.004)PLQHLLPGK 174 3.51E-10 863564500 23994.3 22168.3 21035.3 18035.6 26818.6 24578.2 25276 23403.5 18082.4 16235.4 TRUE FALSE 21953.45879 20725.13964 19607.48244 19424.70504 25750.35837 25969.79644 23589.88416 23198.88567 19962.13019 18246.76392 1.203142589 1.135825494 1.074573142 1.064556166 1.411228779 1.423254915 1.292825635 1.271397261 1.094009342 1 14.155353 -6.240154957 24.98584772 1.273281293 1.11747791 0.18470082 0.126903446 1178.94714 1383969.972 0.038036225 0.049060592 5.75E-07 6.240154957 -0.155803384 AAPEAS(ph)SPPASPLQHLLPGK ddPTM_A459_MK2206_30min_R2 4 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 AAPEAS(0.821)S(0.179)PPASPLQHLLPGK;AAPEAS(0.853)S(0.147)PPASPLQHLLPGK;AAPEAS(0.54)S(0.435)PPAS(0.025)PLQHLLPGK;AAPEAS(0.66)S(0.147)PPAS(0.193)PLQHLLPGK 173.19 5.54E-10 897468500 218860 405485 299162 392904 357517 342851 368884 285949 336416 298394 TRUE FALSE 235616.0899 385349.2045 309135.9118 360802.4864 343479.0862 355898.4351 320449.0877 323323.5161 365676.8556 288657.4282 0.816248143 1.334970684 1.070943899 1.249933143 1.189919443 1.232943968 1.110136294 1.120094217 1.266819489 1 18.13899883 -4.745316179 24.99212845 1.17816419 0.816247118 0.557333595 0.095904362 659.2534861 1021835.173 0.021822779 0.566662087 1.80E-05 4.745316179 -0.361917072 AAPEASS(ph)PPAS(ph)PLQHLLPGK ddPTM_A459_MK2206_30min_R2 4 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 2 AAPEAS(0.393)S(0.614)PPAS(0.993)PLQHLLPGK;AAPEAS(0.207)S(0.796)PPAS(0.998)PLQHLLPGK;AAPEAS(0.461)S(0.539)PPAS(1)PLQHLLPGK;AAPEAS(0.434)S(0.568)PPAS(0.998)PLQHLLPGK 111.62 0.0016813 13097600 170970 167698 177008 199124 188999 158535 151184 146308 140743 175391 TRUE FALSE 184059.5947 159370.3612 182909.3584 182854.9322 181577.9496 164568.1605 131333.3592 165430.958 152984.5717 169668.006 1.084822053 0.939307091 1.078042718 1.077721938 1.070195577 0.969942209 0.77406084 0.975027419 0.901670122 1 17.37235502 -6.980783055 6.537025678 0.905179078 1.045008158 0.47273379 0.068315012 0.136954487 22.97053908 0.024176307 0.020811323 1.05E-07 6.980783055 0.13982908 AAPEASSPPAS(ph)PLQHLLPGK ddPTM_A459_MK2206_30min_R1 1 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 AAPEASSPPAS(1)PLQHLLPGK 153.57 3.91E-06 2893600 3170.6 2561.6 2698.6 2119.5 2807 2308.4 2405.7 2164.8 2073.9 2076.1 TRUE FALSE 2900.923821 2394.839374 2515.426551 2282.744257 2695.191246 2439.099613 2245.220142 2145.873382 2289.489327 2333.302942 1.243269259 1.0263731 1.078053992 0.97833171 1.155097008 1.045342021 0.962249737 0.919671999 0.981222492 1 11.18815791 -7.157643944 3.698221455 0.958683376 1.085811538 0.430319916 0.069831242 0.239673472 5.980690843 0.027757627 0.02088217 6.96E-08 7.157643944 0.127128162 AAPGAEFAPNKR ddPTM_A459_MK2206_30min_R1 1 AAPGAEFAPNKR 12 1 Q15233-2;Q15233 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 0 91.313 0.031402 6515700 2790.2 2229.4 2709.4 2856.1 2775.5 2388.1 2541 2915.1 2015.5 2246.7 FALSE TRUE 2552.878838 2084.265655 2525.493477 3076.077317 2664.945958 2523.312158 2371.494526 2889.613588 2225.018438 2525.038158 1.011025845 0.82543927 1.000180322 1.218230032 1.055408192 0.999316446 0.93919156 1.144384127 0.881182104 1 11.30208947 -5.510494896 24.88863248 1.041147996 0.916876844 0.171913272 0.099433999 827.263773 1662604.102 0.026027934 0.05011012 3.09E-06 5.510494896 -0.124271151 AAPGAEFAPNKR ddPTM_A459_MK2206_30min_R2 1 AAPGAEFAPNKR 12 1 Q15233-2;Q15233 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 0 115 0.0072556 6968800 26326 35895 37909 39402 34892 32848 39249 31197 34238 35099 FALSE TRUE 28341.5388 34112.5065 39172.86714 36182.73056 33521.96476 34098.05366 34095.55915 35274.55502 37215.95935 33953.7225 0.834710798 1.004676483 1.153713474 1.065648415 0.987283935 1.00425082 1.004177352 1.038900963 1.096078916 1 15.05128213 -4.789829682 4.165361039 1.043141018 0.819752586 0.620664215 0.048743064 0.14369609 4.847637293 0.013060831 0.093226681 1.62E-05 4.789829682 -0.223388432 AAPPPPALT(ph)PDSQTVDSSCK ddPTM_A459_MK2206_30min_R2 2 AAPPPPALTPDSQTVDSSCK 20 0 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 AAPPPPALT(0.985)PDS(0.013)QT(0.001)VDSSCK;AAPPPPALT(0.994)PDS(0.006)QTVDSSCK 161.2 1.78E-06 32258000 95861 99017 102245 110739 96764 91580 127790 89924 90767 114063 TRUE FALSE 103200.1919 94099.95976 105653.7973 101691.2695 92964.55916 95065.14107 111011.0195 101677.3756 98661.74959 110341.1337 0.935283049 0.852809434 0.957519592 0.921607982 0.842519522 0.861556683 1.006071044 0.921482064 0.894152039 1 16.75161118 -10.83559312 4.109515933 1.000134662 0.910075604 0.240773746 0.04776553 6.06E-05 1.01E-05 0.04755903 0.011517521 1.46E-11 10.83559312 -0.090059058 AAPPPPPPPPPLES(ph)SPR ddPTM_A459_MK2206_30min_R1 4 AAPPPPPPPPPLESSPR 17 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR 174.35 2.60E-07 141290000 3844.03 3056.63 3477.18 3241.21 3839.62 3613.21 3416.37 3961.79 2887.98 2797.33 TRUE FALSE 3517.075063 2857.642831 3241.15871 3490.848556 3686.679805 3817.786828 3188.470191 3927.152488 3188.195856 3143.884359 1.118703699 0.908952908 1.030940817 1.110361628 1.172651212 1.214353453 1.014181766 1.249140248 1.014094506 1 11.61833244 -5.733348129 4.057044761 1.12478685 1.004818421 0.154449237 0.093906156 0.293870614 10.55365337 0.024790962 0.042601175 1.85E-06 5.733348129 -0.119968429 AAPPPPPPPPPLES(ph)SPR ddPTM_A459_MK2206_30min_R2 6 AAPPPPPPPPPLESSPR 17 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR 155.26 5.22E-05 169445500 237847 320953.8 267405.3 324296.7 309767.7 300938.6 328227.9 263157.1 265848.7 300073.1 TRUE FALSE 256056.7492 305015.701 276320.4592 297800.6222 297604.6636 312391.0293 285131.1825 297552.6365 288971.7394 290281.7393 0.882097337 1.050757453 0.95190438 1.025902018 1.025226955 1.076164936 0.982256697 1.025047725 0.995487143 1 18.14709429 -4.751907008 24.99587462 1.01514827 0.882097073 0.590009096 0.033172203 267.825263 702244.6574 0.008050302 0.101501597 1.77E-05 4.751907008 -0.133051197 AAPQS(ph)PSVPK ddPTM_A459_MK2206_30min_R1 6 AAPQSPSVPK 10 0 E9PF10;O75694-2;O75694 E9PF10 NUP155 Nuclear pore complex protein Nup155 1 AAPQS(0.795)PS(0.205)VPK;AAPQS(0.558)PS(0.442)VPK;AAPQS(0.776)PS(0.224)VPK;AAPQS(0.862)PS(0.138)VPK;AAPQS(0.989)PS(0.011)VPK;AAPQS(0.938)PS(0.062)VPK 150.09 0.00072349 372202500 36538.6 35806.7 35468.4 28857.3 30410 27822.3 31783.9 29116.1 31059.9 28495.5 TRUE FALSE 33430.8002 33475.67732 33060.90383 31079.89425 29198.70531 29397.57458 29663.65402 28861.54101 34288.68775 32025.73767 1.043872917 1.0452742 1.032322945 0.970466147 0.911726237 0.917935908 0.926244208 0.901198321 1.070660358 1 14.96694418 -5.80707658 3.290739482 0.946044511 1.043331934 0.387491742 0.047837903 0.22211095 4.909877364 0.013694162 0.022755588 1.56E-06 5.80707658 0.097287423 AAPQS(ph)PSVPK ddPTM_A459_MK2206_30min_R2 3 AAPQSPSVPK 10 0 E9PF10;O75694-2;O75694 E9PF10 NUP155 Nuclear pore complex protein Nup155 1 AAPQS(0.594)PS(0.406)VPK;AAPQS(0.581)PS(0.419)VPK;AAPQS(0.732)PS(0.268)VPK 138.42 0.0016385 334420000 298391 327835 273570 275900 285999 219297 318172 212398 204775 305106 TRUE FALSE 321236.0444 311555.1906 282690.6873 253358.0874 274769.2422 227642.501 276395.6342 240159.1479 222585.9594 295150.4162 1.088380794 1.055581065 0.957785155 0.858403287 0.930946484 0.771276232 0.936456868 0.813683921 0.754144149 1 18.17109085 -5.391871717 1.37466833 0.855271563 1.105150532 0.561805879 0.072383002 0.379220538 1.219545632 0.02181769 0.095980878 4.06E-06 5.391871717 0.249878969 AAPQSPS(ph)VPK ddPTM_A459_MK2206_30min_R2 2 AAPQSPSVPK 10 0 E9PF10;O75694-2;O75694 E9PF10 NUP155 Nuclear pore complex protein Nup155 1 AAPQS(0.256)PS(0.744)VPK;AAPQS(0.34)PS(0.66)VPK 134.38 0.002111 315840000 625450 642960 602930 657780 584310 502840 638570 478890 439570 583220 TRUE FALSE 673334.9329 611031.5414 623031.3853 604037.2699 561367.0535 521975.9286 554724.9919 541482.5673 477803.004 564189.5792 1.193455104 1.083025217 1.104294387 1.070628193 0.994997203 0.925178252 0.983224456 0.959752869 0.846883781 1 19.10582049 -6.024148857 0.816567313 0.932832445 1.160848767 0.767315767 0.045390967 0.347979775 0.4679975 0.022259881 0.051674046 9.46E-07 6.024148857 0.228016323 AAPSTAPAEAT(ph)PPKPGEAEAPPK ddPTM_A459_MK2206_30min_R1 2 AAPSTAPAEATPPKPGEAEAPPK 23 1 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 1 AAPS(0.014)T(0.012)APAEAT(0.974)PPKPGEAEAPPK;AAPSTAPAEAT(1)PPKPGEAEAPPK 118.52 1.48E-05 26072000 4377.2 4810.8 4893.2 3703.2 2880 3302.6 4334.6 3467.5 5642.4 6706.4 TRUE FALSE 4004.896154 4497.616046 4561.063217 3988.421106 2765.283501 3489.590358 4045.446743 3437.184013 6228.947672 7537.239463 0.531347873 0.596719272 0.605137098 0.529162053 0.366882798 0.462979898 0.536727905 0.456026909 0.82642295 1 12.87982051 -8.431796215 3.411908504 0.996280585 0.511942943 0.855865405 0.067712102 0.084733893 1.847804562 0.072783022 0.019326374 3.70E-09 8.431796215 -0.484337642 AAPSTAPAEAT(ph)PPKPGEAEAPPK ddPTM_A459_MK2206_30min_R2 3 AAPSTAPAEATPPKPGEAEAPPK 23 1 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 1 AAPSTAPAEAT(1)PPKPGEAEAPPK;AAPS(0.007)T(0.02)APAEAT(0.973)PPKPGEAEAPPK;AAPST(0.002)APAEAT(0.998)PPKPGEAEAPPK 114.9 1.51E-05 40202400 154743 120607 128311 117480 97419 73049 154232 109078 71625 163525 TRUE FALSE 166590.2431 114617.8318 132588.8247 107881.5082 93593.84057 75828.93088 133981.1531 123334.8691 77854.81303 158189.1926 1.053107613 0.724561709 0.838166138 0.681977741 0.591657616 0.479355951 0.846967804 0.779666847 0.492162655 1 17.27129151 -1.90863302 1.050994675 0.689189622 199.629195 0.29073831 0.155857272 1132.421059 3.033309996 0.047692912 540776.8131 0.012341473 1.90863302 198.9400054 AAPSTAPAEAT(ph)PPKPGEAEAPPKHPGVLK ddPTM_A459_MK2206_30min_R2 1 AAPSTAPAEATPPKPGEAEAPPKHPGVLK 29 2 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 1 AAPS(0.022)T(0.062)APAEAT(0.916)PPKPGEAEAPPKHPGVLK 50.803 0.012806 16517000 50184 70267 64312 62949 70483 38514 82817 47599 54739 60795 TRUE FALSE 54026.12562 66777.64296 66456.12998 57805.86534 67715.48327 39979.67726 71943.02842 53820.35273 59500.09927 58811.26413 0.91863568 1.135456684 1.129989824 0.982904656 1.151403294 0.679796258 1.22328655 0.915136811 1.01171264 1 15.84380488 AAPTT(ph)PPPPVK ddPTM_A459_MK2206_30min_R1 2 AAPTTPPPPVK 11 0 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 AAPT(0.235)T(0.765)PPPPVK;AAPT(0.154)T(0.846)PPPPVK 122.7 0.0095321 18796800 6858.4 6010.1 5585.8 5543.7 6454.8 5277.1 5942.5 5957.1 6131.1 5886.9 TRUE FALSE 6275.057065 5618.841398 5206.651459 5970.676735 6197.691648 5575.884842 5546.086668 5905.017703 6768.449785 6616.213616 0.948436285 0.849253323 0.786953348 0.90243107 0.936742978 0.842760704 0.838256893 0.892507111 1.023009561 1 12.6917901 -8.203314007 4.585574193 1.012392122 0.870405055 0.587216957 0.046013293 0.143383246 6.135201002 0.03648299 0.012336786 6.26E-09 8.203314007 -0.141987068 AAPTT(ph)PPPPVK ddPTM_A459_MK2206_30min_R2 1 AAPTTPPPPVK 11 0 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 AAPT(0.042)T(0.958)PPPPVK 100.88 0.037016 24626000 50459 66128 57516 62713 50355 52512 62276 49404 53828 62040 TRUE FALSE 54322.17984 62844.17968 59433.55473 57589.14729 48377.80969 54510.38096 54099.08639 55861.27243 58509.86214 60015.63988 0.905133728 1.047130045 0.990301109 0.959568996 0.80608671 0.908269595 0.901416472 0.930778586 0.974910244 1 15.87305089 -6.010621769 24.72322497 0.912295691 0.985391253 0.176992182 0.058005358 633.239297 1473934.037 0.016648662 0.023006353 9.76E-07 6.010621769 0.073095561 AAPWGSNPS(ph)PSAESTQAMDR ddPTM_A459_MK2206_30min_R1 4 AAPWGSNPSPSAESTQAMDR 20 0 Q96N67-2;Q96N67-6;Q96N67;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 AAPWGSNPS(0.948)PS(0.049)AES(0.002)T(0.001)QAMDR;AAPWGSNPS(0.955)PS(0.025)AES(0.016)T(0.005)QAMDR;AAPWGSNPS(0.909)PS(0.089)AES(0.002)TQAMDR;AAPWGSNPS(0.959)PS(0.039)AES(0.001)T(0.001)QAMDR 272.64 3.61E-59 40777000 3050.21 2938.44 3039.07 2618.44 3170.6 3063.96 3008.01 3009.22 2364.21 2422.1 TRUE FALSE 2790.773622 2747.147022 2832.786396 2820.112702 3044.308288 3237.438767 2807.351141 2982.910707 2609.97809 2722.168034 1.025202555 1.009176137 1.040636125 1.03598039 1.118339592 1.189286895 1.031292377 1.095784929 0.958786547 1 11.41054041 -6.032181262 18.2692927 1.07505274 1.025902703 0.074808126 0.060758596 55.20795515 31341.62688 0.018306358 0.02371103 9.29E-07 6.032181262 -0.049150037 AAPWGSNPS(ph)PSAESTQAMDR ddPTM_A459_MK2206_30min_R2 3 AAPWGSNPSPSAESTQAMDR 20 0 Q96N67-2;Q96N67-6;Q96N67;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 AAPWGSNPS(0.637)PS(0.254)AES(0.041)T(0.068)QAMDR;AAPWGSNPS(0.745)PS(0.237)AES(0.015)T(0.002)QAMDR;AAPWGSNPS(0.968)PS(0.031)AESTQAMDR 266.28 5.89E-49 31453400 32740.6 37572 36935.5 41513 45813 45406 42966 33976.4 41845 34963.8 TRUE FALSE 35247.24551 35706.22911 38166.91114 38121.25511 44014.15143 47133.95715 37324.51259 38417.23214 45484.60246 33822.93407 1.042110819 1.055681007 1.128432887 1.127083033 1.30131086 1.393550218 1.103526752 1.135833812 1.34478583 1 15.0457142 -5.766867112 1.985804037 1.221154846 1.056472071 0.23294741 0.112428702 0.460649913 3.706983817 0.0347605 0.068461149 1.71E-06 5.766867112 -0.164682776 AAPWGSNPSPS(ph)AESTQAMDR ddPTM_A459_MK2206_30min_R2 1 AAPWGSNPSPSAESTQAMDR 20 0 Q96N67-2;Q96N67-6;Q96N67;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 AAPWGSNPS(0.156)PS(0.718)AES(0.063)T(0.063)QAMDR 72.891 0.0080542 9470400 9289.3 9702.8 10059 10411 9177.7 11631 9220.9 6661.2 10435 6654.9 TRUE FALSE 10000.49595 9220.973061 10394.36204 9560.387997 8817.337384 12073.62586 8010.184754 7531.841711 11342.61744 6437.751158 1.553414493 1.432328283 1.614595188 1.485050876 1.369630041 1.875441526 1.244252 1.169949184 1.76189125 1 12.6523411 -12.5068615 0.294700961 4.36E-11 1.525831648 0.334397622 0.207571026 79.68615704 2.190491161 49.96537933 0.21729549 3.11E-13 12.5068615 1.525831648 AAQDRDQIYR ddPTM_A459_MK2206_30min_R1 1 AAQDRDQIYR 10 1 P62995;H7C2L4;P62995-3 P62995 TRA2B Transformer-2 protein homolog beta 0 125.97 0.0047401 0 1779.1 1943.5 1758.4 1702.9 2090.5 1789.4 2089.6 1891.6 1210.1 1102.5 FALSE TRUE 1627.778203 1816.977797 1639.044707 1834.057653 2007.230958 1890.714282 1950.206597 1875.061941 1335.894225 1239.086023 1.313692651 1.466385515 1.322785243 1.480169753 1.619928657 1.525894285 1.573907348 1.513262118 1.078128718 1 10.27506063 -8.309535807 4.818535248 1.016395631 1.48171318 0.781315009 0.09282533 0.10070115 5.169956461 0.093484862 0.025392726 4.90E-09 8.309535807 0.465317548 AAQDRDQIYR ddPTM_A459_MK2206_30min_R2 1 AAQDRDQIYR 10 1 P62995;H7C2L4;P62995-3 P62995 TRA2B Transformer-2 protein homolog beta 0 101.97 0.044481 13543000 30895 47410 36847 46322 46524 49055 44291 29952 38905 37446 FALSE TRUE 33260.34495 45055.68834 38075.46059 42537.34442 44697.234 50921.8224 38475.5385 33866.82924 42288.88658 36224.14009 0.918181767 1.243802841 1.051107369 1.17428169 1.233907386 1.405742753 1.06215188 0.934924312 1.167422787 1 15.14466382 -7.500382195 24.85422957 1.030411701 1.17716939 0.19246532 0.131032176 1111.368378 1227846.482 0.055375691 0.036993918 3.16E-08 7.500382195 0.146757689 AAQEEYVKR ddPTM_A459_MK2206_30min_R1 2 AAQEEYVKR 9 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BR68 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ; 191.17 0.024748 24815000 4578.7 5214.6 5035.9 4365.6 4885.7 4294.3 5473.8 5016.4 2680.7 2632.53 FALSE TRUE 4189.257521 4875.128592 4694.077139 4701.839268 4691.092223 4537.439555 5108.65279 4972.542144 2959.368358 2958.667691 1.415927018 1.64774456 1.586550985 1.589174507 1.585542113 1.533609053 1.726673396 1.680669363 1.000236818 1 11.53073195 -8.266223821 24.98449966 1.000118286 1.598898925 0.899278541 0.079728033 116.7869197 609853.6534 0.068802899 0.020049805 5.42E-09 8.266223821 0.598780638 AAQPPAQPCQLCGRS(ph)PLGEAPPGTPPCR ddPTM_A459_MK2206_30min_R2 1 AAQPPAQPCQLCGRSPLGEAPPGTPPCR 28 1 M0QXZ5;Q96B54 M0QXZ5 ZNF428 Zinc finger protein 428 1 AAQPPAQPCQLCGRS(0.543)PLGEAPPGT(0.457)PPCR 42.172 0.041014 4275200 0 2674.7 1378 2514.3 4195.6 1258.2 2500.9 1324.9 2867.1 1225.1 TRUE FALSE 0 2541.878287 1423.941832 2308.873647 4030.859663 1306.081683 2172.528826 1498.068979 3116.475175 1185.125087 0 2.144818564 1.201511847 1.948210929 3.401210308 1.102062303 1.833164152 1.264059798 2.629659273 1 10.21082363 -4.755941725 24.99999075 1.853884757 1.23E-05 0.370153296 0.718181916 189.8741662 863341.317 0.173909789 1.473642079 1.75E-05 4.755941725 -1.853872492 AAQQAASSSGQGQQAQT(ph)PTGK ddPTM_A459_MK2206_30min_R2 1 AAQQAASSSGQGQQAQTPTGK 21 0 H0Y9X2;U3KQK7;U3KPX3;A0A590UJ43;P48729;P48729-2 H0Y9X2 CSNK1A1 Casein kinase I isoform alpha 1 AAQQAASSSGQGQQAQT(1)PTGK 245.82 8.13E-32 4240500 19934 20764 12186 16557 16447 13344 16561 13383 11257 13942 TRUE FALSE 21460.16237 19732.88995 12592.27516 15204.24014 15801.20814 13851.81527 14386.52081 15132.20405 12236.11351 13487.07368 1.591165206 1.463096474 0.933655102 1.127319424 1.171581658 1.02704379 1.066689569 1.121978304 0.907247473 1 13.71928974 -5.149401915 4.659534457 1.05714436 1.559934317 0.847560059 0.082260642 0.076285009 2.569993645 0.020888393 0.060562375 7.09E-06 5.149401915 0.502789957 AAQQQQPSAS(ph)PR ddPTM_A459_MK2206_30min_R1 2 AAQQQQPSASPR 12 0 Q86U86-8;Q86U86 Q86U86-8 PBRM1 Protein polybromo-1 1 AAQQQQPSAS(1)PR;AAQQQQPSAS(1)PR 202.61 6.09E-05 18082000 1742.49 2106.8 2001.92 1639.37 2082.34 1736.29 2017.03 1675.25 1733.27 1588.17 TRUE FALSE 1594.282075 1969.646937 1866.035248 1765.634561 1999.395988 1834.597239 1882.477609 1660.603466 1913.449619 1784.92449 0.893193009 1.103490343 1.045442123 0.98919286 1.120157183 1.027829048 1.054653919 0.930349421 1.07200592 1 10.80164733 -10.24767259 9.50281203 1.000011776 1.028825188 0.011951595 0.068109851 0 0 0.062381658 0.015129775 5.65E-11 10.24767259 0.028813412 AAQQQQPSAS(ph)PR ddPTM_A459_MK2206_30min_R2 1 AAQQQQPSASPR 12 0 Q86U86-8;Q86U86 Q86U86-8 PBRM1 Protein polybromo-1 1 AAQQQQPSAS(1)PR 201.48 7.87E-05 21493000 5101.5 7775.1 5702.5 8378.3 6586.3 7333.6 6735.7 5635.9 5383.3 6159.3 TRUE FALSE 5492.074762 7388.99984 5892.618504 7693.766089 6327.688768 7612.685287 5851.294499 6372.531481 5851.529703 5958.322545 0.921748482 1.240114107 0.988972728 1.291263779 1.061991646 1.277655788 0.982037218 1.069517709 0.982076693 1 12.54069051 -7.323547008 24.99915099 1.014200957 1.133072998 0.210316375 0.115407958 365.4697373 147104.7324 0.044692251 0.030131513 4.75E-08 7.323547008 0.118872041 AAS(ph)ADYLRPR ddPTM_A459_MK2206_30min_R1 2 AASADYLRPR 10 1 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2;B0QYZ7 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 AAS(1)ADYLRPR;AAS(1)ADYLRPR 142.19 0.0006743 37122000 5145.9 6393.2 6902.3 5791.3 7381.6 6519.5 7024.3 5914.7 5790.4 4953.5 TRUE FALSE 4708.214183 5977.001518 6433.791107 6237.346929 7087.575241 6888.628456 6555.721764 5862.988401 6392.332801 5567.176977 0.845709451 1.073614427 1.155664915 1.120378776 1.273100401 1.237364733 1.177566618 1.053134906 1.148217998 1 12.44273023 -4.69556519 1.975477321 1.156425469 0.702842754 0.583973163 0.07564032 0.706108087 2.480065592 0.020862663 0.633473711 2.02E-05 4.69556519 -0.453582715 AAS(ph)ADYLRPR ddPTM_A459_MK2206_30min_R2 3 AASADYLRPR 10 1 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2;B0QYZ7 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 AAS(1)ADYLRPR;AAS(1)ADYLRPR;AAS(0.998)ADY(0.002)LRPR 141.71 0.00070331 35507800 114097 153157 158973 174071 149390 156795 158829 114417 139076 134239 TRUE FALSE 122832.354 145551.4461 164273.0805 159848.8425 143524.198 162761.9436 137974.5615 129371.6948 151172.5791 129858.7924 0.945891701 1.120843983 1.265013153 1.230943546 1.105232809 1.253376383 1.062496878 0.99624902 1.164130486 1 16.98658417 -7.457973254 16.21051751 1.053989875 1.158414409 0.196780585 0.096657712 9.469060559 2363.858241 0.041424706 0.027926054 3.48E-08 7.457973254 0.104424534 AAS(ph)DDGSLK ddPTM_A459_MK2206_30min_R2 3 AASDDGSLK 9 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5;A0A1B0GV45 Q92614;A0A1B0GV45 MYO18A Unconventional myosin-XVIIIa 1 AAS(1)DDGSLK;AAS(0.995)DDGS(0.005)LK;AAS(1)DDGSLK 99.568 0.018691 24613100 152744 121806 137831 128567 150680 92446 166580 263615 193914 202105 TRUE FALSE 164438.1981 115757.2912 142426.2167 118062.6648 144763.5461 95964.09731 144707.8459 298070.3856 210780.2892 195510.3304 0.84107166 0.59207762 0.728484354 0.60386919 0.740439371 0.490839011 0.740154475 1.524576144 1.078103079 1 17.57688531 -7.645278585 7.092423421 1.222742419 0.662524397 0.704425853 0.155875016 0.1038527 6.004790976 0.068565469 0.039221612 2.26E-08 7.645278585 -0.560218022 AAS(ph)DSNPAGPLR ddPTM_A459_MK2206_30min_R1 2 AASDSNPAGPLR 12 0 Q9BUU2-2;Q9BUU2 Q9BUU2-2 METTL22 Methyltransferase-like protein 22 1 AAS(0.967)DS(0.033)NPAGPLR;AAS(0.824)DS(0.176)NPAGPLR 101.45 0.012517 13753300 3546.8 3249.5 3656.6 3124.1 4144.1 3537.8 4187.7 3591.6 3456.6 3280.8 TRUE FALSE 3245.126035 3037.956959 3408.40018 3364.718723 3979.031722 3738.107179 3908.346174 3560.19902 3815.92594 3687.250273 0.880093781 0.823908532 0.924374514 0.912527893 1.079132532 1.013792637 1.059962271 0.965543089 1.034897459 1 11.84832963 -5.95841105 2.150579473 1.024459157 0.864116416 0.755814681 0.03886545 0.143156923 1.337300967 0.011798969 0.019082342 1.10E-06 5.95841105 -0.160342741 AAS(ph)EELLEK ddPTM_A459_MK2206_30min_R1 2 AASEELLEK 9 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 AAS(1)EELLEK;AAS(1)EELLEK 168.22 0.00078553 70293000 10765.6 9768.2 9830.7 9045.5 9077.3 8790.1 10977.9 10154.1 9779.1 8810.8 TRUE FALSE 9849.929188 9132.288405 9163.419474 9742.185977 8715.73192 9287.787866 10245.58432 10065.32377 10795.67244 9902.348422 0.994706384 0.922234607 0.925378414 0.983825812 0.880168173 0.937937898 1.034662071 1.016458253 1.090213349 1 13.273555 -7.264468803 8.029576562 1.036851648 0.938316635 0.610515373 0.036990116 0.079857496 54.92069544 0.014529423 0.010409763 5.44E-08 7.264468803 -0.098535013 AAS(ph)EELLEK ddPTM_A459_MK2206_30min_R2 3 AASEELLEK 9 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 AAS(1)EELLEK;AAS(1)EELLEK;AAS(1)EELLEK 135.8 0.0026956 36408600 58521 69874 54990 64799 64004 54023 76415 69059 60056 55370 TRUE FALSE 63001.41276 66404.15877 56823.33915 59504.71442 61490.88137 56078.88312 66381.61871 78085.24842 65279.56232 53563.28143 1.176205249 1.239732835 1.060863667 1.110923618 1.148004374 1.046965041 1.239312024 1.457813008 1.218737175 1 15.70895673 -7.501717262 23.76800256 1.272677508 1.133078552 0.107996074 0.11752316 578.6575122 649935.7819 0.047927909 0.031894351 3.15E-08 7.501717262 -0.139598957 AAS(ph)GFNAMEDAQTLR ddPTM_A459_MK2206_30min_R1 2 AASGFNAMEDAQTLR 15 0 P09525;Q6P452;B4E1S2 P09525 ANXA4 Annexin A4;Annexin 1 AAS(1)GFNAMEDAQTLR;AAS(1)GFNAMEDAQTLR 219.85 2.30E-09 17926600 4334.1 2487.1 3404 2616.4 4234.9 3829.1 3821.6 3370.7 2301 2374.2 TRUE FALSE 3965.462036 2325.189338 3172.945964 2817.915581 4066.214965 4045.900333 3566.668037 3341.230325 2540.197184 2668.33382 1.486119168 0.871401217 1.189111325 1.056058114 1.52387791 1.516264683 1.336664854 1.252178532 0.951978783 1 11.38172345 -8.240515387 6.912176798 0.975045924 1.273449417 0.274109478 0.197092294 0.2277177 52.10129213 0.154423613 0.053600686 5.75E-09 8.240515387 0.298403493 AAS(ph)GFNAMEDAQTLR ddPTM_A459_MK2206_30min_R2 3 AASGFNAMEDAQTLR 15 0 P09525;Q6P452;B4E1S2 P09525 ANXA4 Annexin A4;Annexin 1 AAS(1)GFNAMEDAQTLR;AAS(0.903)GFNAMEDAQT(0.097)LR;AAS(1)GFNAMEDAQTLR 150.9 0.0002568 13152600 30932.5 32955 31751.5 38150.8 36243.9 34068.3 36125.7 26106 30960.6 31683.4 TRUE FALSE 33300.71598 31318.50262 32810.07916 35033.7576 34820.78238 35364.79303 31382.3522 29518.14384 33653.49702 30649.57325 1.08649852 1.021825079 1.070490571 1.143042264 1.136093546 1.153842918 1.023908292 0.963084986 1.098008665 1 14.90357937 -7.36981459 7.954821705 1.017343737 1.100215003 0.404143222 0.047936737 0.325030989 21.46878964 0.021614997 0.014522663 4.27E-08 7.36981459 0.082871265 AAS(ph)GGSGSENVGPPAAAVPGPLSR ddPTM_A459_MK2206_30min_R2 2 AASGGSGSENVGPPAAAVPGPLSR 24 0 Q9UL54-2 Q9UL54-2 1 AAS(0.989)GGS(0.009)GS(0.002)ENVGPPAAAVPGPLSR;AAS(0.854)GGS(0.081)GS(0.065)ENVGPPAAAVPGPLSR 194.9 6.90E-28 6096100 31371 28015 25742 26874 21489 27500 26821 15227.5 22267 31686 TRUE FALSE 33772.78788 26623.81584 26600.22543 24678.30823 20645.23389 28546.53177 23299.37048 17217.78653 24203.74341 30652.08841 1.101810337 0.868580812 0.867811194 0.805110174 0.673534332 0.931307889 0.760123427 0.561716588 0.789627874 1 14.90369775 -1.522885338 0.748762274 0.768187203 58.54958131 0.37417173 0.117123587 372.3047111 1.616049418 0.043306754 36279.13829 0.029999545 1.522885338 57.78139411 AAS(ph)KDTISNNR ddPTM_A459_MK2206_30min_R2 2 AASKDTISNNR 11 1 Q14669;Q14669-2;Q14669-3;Q14669-4 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 AAS(0.97)KDT(0.03)ISNNR;AAS(0.672)KDT(0.052)IS(0.277)NNR 122.46 0.019679 5198400 16084.9 18768.2 17563.7 13980.6 14862.4 13751.7 20059.3 12537.8 14680.1 13467.2 TRUE FALSE 17316.37231 17836.19848 18149.26499 12838.34026 14278.8275 14275.03058 17425.48981 14176.53351 15956.94856 13027.76637 1.329189657 1.369091061 1.393121774 0.985459817 1.096030363 1.095738915 1.337565422 1.088178365 1.224841474 1 13.66930213 -5.742863756 24.99902349 1.129206498 1.364329964 0.567356982 0.097932377 187.0899965 251783.2336 0.026828244 0.046362512 1.81E-06 5.742863756 0.235123466 AAS(ph)LDSVATSR ddPTM_A459_MK2206_30min_R1 2 AASLDSVATSR 11 0 Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4;Q9Y2J4-3 Q9Y2J4 AMOTL2 Angiomotin-like protein 2 1 AAS(0.862)LDS(0.138)VATSR;AAS(1)LDSVATSR 184.98 2.21E-05 19315800 2929.6 2033.29 2530.8 2075.36 2736.8 2585.9 2611.7 2540.8 2276.68 2103.49 TRUE FALSE 2680.422136 1900.922451 2359.016347 2235.204587 2627.787461 2732.311423 2437.478258 2518.586053 2513.349033 2364.086222 1.133808958 0.804083385 0.997855461 0.94548353 1.111544679 1.155757941 1.031044568 1.065352875 1.063137634 1 11.20706694 -6.25529537 24.56052133 1.076633425 0.96040234 0.248984713 0.084776577 482.9364962 1930523.994 0.024197938 0.030410264 5.56E-07 6.25529537 -0.116231085 AAS(ph)LDSVATSR ddPTM_A459_MK2206_30min_R2 4 AASLDSVATSR 11 0 Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4;Q9Y2J4-3 Q9Y2J4 AMOTL2 Angiomotin-like protein 2 1 AAS(1)LDSVATSR;AAS(1)LDSVATSR;AAS(0.929)LDS(0.071)VATSR;AAS(0.997)LDS(0.003)VATSR 184.98 2.21E-05 25895300 225212 271230 220616 284902 258581 260073 277774 199687 228678 237067 TRUE FALSE 242454.4039 257761.1126 227971.2273 261624.5952 248427.8107 269970.2603 241301.9401 225786.7765 248567.9991 229331.5232 1.057222315 1.123967211 0.99406843 1.140813926 1.083269353 1.177205194 1.052196997 0.984543134 1.083880644 1 17.80707515 -7.515125817 24.92380727 1.024201136 1.095881684 0.289664317 0.05211609 454.7760649 1462010.29 0.022710023 0.013882916 3.05E-08 7.515125817 0.071680548 AAS(ph)LGSSQSSR ddPTM_A459_MK2206_30min_R2 3 AASLGSSQSSR 11 0 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;H0YA91;H0Y944;P20810-5;F8W7E0;E9PSG1;D6RGF7;D6RBR1;E7EN75 P20810-6;P20810-5 CAST Calpastatin 1 AAS(0.855)LGS(0.139)S(0.006)QSSR;AAS(0.948)LGS(0.051)S(0.002)QSSR;AAS(0.992)LGS(0.007)SQSSR 125.36 0.0033649 21656600 37686.3 48728 42380 67137 40202 92321 51138 37866 55440 38082 TRUE FALSE 40571.5921 46308.23838 43792.92805 61651.69234 38623.46748 95834.34035 44423.51917 42815.21621 60262.07099 36839.38746 1.101310171 1.257030629 1.188752883 1.673526532 1.048428602 2.601409713 1.20587019 1.162213032 1.635805456 1 15.16896145 -5.73780134 23.04103647 1.499986699 1.189830477 0.083543846 0.439150933 244.8438793 238654.3605 0.117746566 0.203719883 1.83E-06 5.73780134 -0.310156222 AAS(ph)LNYLNQPSAAPLQVSR ddPTM_A459_MK2206_30min_R1 3 AASLNYLNQPSAAPLQVSR 19 0 Q9NSK0-5;Q9NSK0;Q9NSK0-3 Q9NSK0-5 KLC4 Kinesin light chain 4 1 AAS(0.523)LNYLNQPS(0.477)AAPLQVSR;AAS(1)LNYLNQPSAAPLQVSR;AAS(0.997)LNYLNQPS(0.003)AAPLQVSR 296.01 2.77E-86 191550700 3966.6 3532.76 3025.41 2968.5 3942.96 3268.9 3707.78 3861.37 3102.67 3234.76 TRUE FALSE 3629.219841 3302.776682 2820.053598 3197.134384 3785.903554 3453.982293 3460.440761 3827.610449 3425.20365 3635.50649 0.998270764 0.90847773 0.775697583 0.879419248 1.041368944 0.950069076 0.951845574 1.052841044 0.942153083 1 11.82794066 -6.243454386 24.30360933 0.988479442 0.883555075 0.384843566 0.061210408 610.7044783 825260.4627 0.018713392 0.024104838 5.71E-07 6.243454386 -0.104924367 AAS(ph)LNYLNQPSAAPLQVSR ddPTM_A459_MK2206_30min_R2 3 AASLNYLNQPSAAPLQVSR 19 0 Q9NSK0-5;Q9NSK0;Q9NSK0-3 Q9NSK0-5 KLC4 Kinesin light chain 4 1 AAS(0.656)LNY(0.006)LNQPS(0.338)AAPLQVSR;AAS(0.95)LNY(0.045)LNQPS(0.005)AAPLQVSR;AAS(0.987)LNYLNQPS(0.012)AAPLQVSR 166.59 6.46E-09 131435000 77960 91743 83147 100126 75929 104173 90741 81279 85611 78041 TRUE FALSE 83928.67754 87187.17603 85919.07948 91945.38551 72947.64595 108137.3765 78826.5977 91902.44437 93057.29003 75494.52856 1.111718679 1.154880727 1.138083529 1.217907937 0.966264011 1.432386937 1.044136565 1.217339139 1.232636216 1 16.20408447 -2.561195897 0.673853027 1.16828026 3.51E-10 0.005160141 0.12803926 340.6535326 9.106932159 0.049170055 547.1107013 0.002746655 2.561195897 -1.16828026 AAS(ph)LTEDRDR ddPTM_A459_MK2206_30min_R1 1 AASLTEDRDR 10 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 AAS(0.928)LT(0.072)EDRDR 169.21 0.0011503 5576500 4272.5 4359.5 4082.2 3464.1 5286.7 3778.7 3770.5 3229.7 2353.5 2438 TRUE FALSE 3909.101439 4075.695758 3805.111638 3730.905582 5076.119544 3992.646729 3518.976825 3201.463073 2598.154747 2740.037846 1.426659652 1.487459658 1.388707694 1.361625566 1.852572785 1.457150212 1.284280372 1.168401042 0.948218562 1 11.4199801 -7.716783992 1.699945906 0.986391481 1.498485463 0.714706354 0.131934245 0.217777019 1.210354087 0.103212364 0.04251133 1.92E-08 7.716783992 0.512093981 AAS(ph)NGTQIR ddPTM_A459_MK2206_30min_R1 1 AASNGTQIR 9 0 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 AAS(0.719)NGT(0.281)QIR 91.041 0.027744 21352000 138.99 0 44.884 0 118.33 60.629 0 0 0 162.31 TRUE FALSE 127.1681706 0 41.83739913 0 113.6166655 64.06176159 0 0 0 182.4181882 0.697124404 0 0.229348836 0 0.622836279 0.35118078 0 0 0 1 7.511105772 -10.86890882 4.677948105 1.000695101 0.203083435 0.462905951 0.254775594 0.001859358 0.000259935 0.248265298 0.060164128 1.35E-11 10.86890882 -0.797611666 AAS(ph)PAKPSSLDLVPNLPK ddPTM_A459_MK2206_30min_R1 2 AASPAKPSSLDLVPNLPK 18 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 AAS(1)PAKPSSLDLVPNLPK;AAS(0.998)PAKPS(0.002)S(0.001)LDLVPNLPK 125.73 0.00044627 591060000 27040 33795 30006 26433 24222 22020 24633 27717 24212 23540 TRUE FALSE 24740.10601 31594.93936 27969.27632 28468.87424 23257.18645 23266.75337 22989.77752 27474.67319 26728.92404 26456.31292 0.935130533 1.194230634 1.057187236 1.076071119 0.8790789 0.879440512 0.868971333 1.038492147 1.010304199 1 14.69132439 -6.243872336 23.88266372 0.940788266 1.074234059 0.343788677 0.080409421 502.215781 682768.9188 0.024352546 0.031355071 5.70E-07 6.243872336 0.133445793 AAS(ph)PAKPSSLDLVPNLPK ddPTM_A459_MK2206_30min_R2 3 AASPAKPSSLDLVPNLPK 18 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 AAS(0.999)PAKPSS(0.001)LDLVPNLPK;AAS(0.898)PAKPS(0.075)S(0.027)LDLVPNLPK;AAS(0.67)PAKPS(0.165)S(0.165)LDLVPNLPK 92.096 0.0071508 705057000 535947 698411 556423 580918 606489 434189 711400 524117 501387 612604 TRUE FALSE 576979.5144 663728.9253 574973.8651 533455.1411 582675.1945 450712.3666 617992.3255 592620.8915 544996.735 592614.7816 0.973616474 1.120000624 0.970232068 0.900171845 0.983227575 0.760548641 1.042823002 1.00001031 0.919647555 1 19.17673509 -5.502329385 20.52299358 0.941396139 1.046385808 0.203554816 0.080311948 110.0708645 109925.9254 0.020793795 0.042169532 3.15E-06 5.502329385 0.10498967 AAS(ph)PESASSTPESLQAR ddPTM_A459_MK2206_30min_R1 2 AASPESASSTPESLQAR 17 0 Q96BT3 Q96BT3 CENPT Centromere protein T 1 AAS(1)PESASSTPESLQAR;AAS(1)PESASSTPESLQAR 224.67 1.49E-12 23172000 2536.13 3236 2603.69 2470.77 3379.3 2947.44 3009.78 2868.64 2585.66 2368.12 TRUE FALSE 2320.418826 3025.335812 2426.958777 2661.069134 3244.695325 3114.321506 2809.003068 2843.559783 2854.44861 2661.500584 0.87184607 1.136703043 0.911876102 0.999837892 1.21912253 1.17013745 1.055420797 1.068404719 1.072495955 1 11.37802417 -4.749949782 24.95195209 1.07271234 0.871845618 0.330522437 0.084738472 647.6604908 1406433.334 0.022440281 0.345974711 1.78E-05 4.749949782 -0.200866722 AAS(ph)PESASSTPESLQAR ddPTM_A459_MK2206_30min_R2 2 AASPESASSTPESLQAR 17 0 Q96BT3 Q96BT3 CENPT Centromere protein T 1 AAS(0.999)PES(0.001)ASSTPESLQAR;AAS(0.998)PES(0.002)ASSTPESLQAR 254.72 4.26E-31 29168000 20911 26328 20910.3 24330 25047 26331 27593 20062.8 23043 19565 TRUE FALSE 22511.96224 25020.5898 21607.43897 22342.16117 24063.52893 27333.04466 23970.00595 22685.07685 25047.23849 18926.59565 1.189435367 1.321980469 1.141644243 1.180463808 1.271413485 1.444160649 1.266472132 1.198581999 1.323388471 1 14.20812731 -10.73799609 4.261170582 0.999902355 1.259921725 0.460831493 0.084280649 63463985.98 15.55645295 73208.67885 0.021359927 1.83E-11 10.73799609 0.26001937 AAS(ph)PFR ddPTM_A459_MK2206_30min_R1 3 AASPFR 6 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 AAS(1)PFR;AAS(1)PFR;AAS(1)PFR 122.74 0.0175 818070000 7900.3 8040.3 7359.2 6625.3 7604.8 6839.6 8427.7 8138 3605.8 6049.7 TRUE FALSE 7228.337999 7516.875009 6859.678008 7135.581754 7301.884713 7226.852241 7865.50351 8066.850324 3980.635813 6799.182509 1.06311869 1.105555704 1.008897467 1.049476425 1.073935683 1.06290017 1.156830766 1.186444152 0.585458003 1 12.73114558 -8.248177295 24.99978909 0.792728972 1.085969115 0.559925039 0.104830198 459.4948542 866178.2717 0.067031051 0.025005091 5.65E-09 8.248177295 0.293240143 AAS(ph)PFR ddPTM_A459_MK2206_30min_R2 5 AASPFR 6 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 AAS(1)PFR;AAS(1)PFR;AAS(1)PFR;AAS(1)PFR;AAS(1)PFR 113.41 0.024933 1429902000 2611561 3106901 2811689 3257074 3471031 3204890 3476222 2708295 3367839 3186942 TRUE FALSE 2811504.118 2952616.814 2905429.308 2990960.635 3334740.882 3326854.335 3019789.876 3062278.455 3660767.549 3082952.344 0.911951858 0.957723794 0.942417846 0.970161164 1.081671239 1.079113124 0.979512344 0.993294127 1.187422685 1 21.55588116 -6.101329721 4.263846634 1.050427406 0.941314543 0.466573379 0.057136627 0.22140596 6.884729957 0.017240497 0.022975608 7.92E-07 6.101329721 -0.109112863 AAS(ph)PHQVTPQADEK ddPTM_A459_MK2206_30min_R1 2 AASPHQVTPQADEK 14 0 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 NSD1 "Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific" 1 AAS(1)PHQVTPQADEK;AAS(1)PHQVTPQADEK 195.23 2.34E-21 6463200 5115.8 5434.5 5520.8 4023 4644.2 4753.6 5067.5 5052.9 4978.8 5278.7 TRUE FALSE 4680.674346 5080.713062 5146.063478 4332.852157 4459.21168 5022.744724 4729.456321 5008.723028 5496.364077 5932.665208 0.788966541 0.856396389 0.867411745 0.730338222 0.751637169 0.846625344 0.797189148 0.844261871 0.92645782 1 12.53446466 -8.375423126 1.652075711 0.999500688 0.805605467 0.706783874 0.041387854 0.20798872 1.166315701 0.042142396 0.012398369 4.21E-09 8.375423126 -0.193895221 AAS(ph)PHQVTPQADEK ddPTM_A459_MK2206_30min_R2 2 AASPHQVTPQADEK 14 0 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 NSD1 "Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific" 1 AAS(1)PHQVTPQADEK;AAS(1)PHQVTPQADEK 227.63 3.76E-13 39877000 151099 154518 153961 183584 153446 140926 209016 144581 136623 179402 TRUE FALSE 162667.2556 146844.8608 159093.9829 168584.5999 147420.939 146289.0377 181571.9481 163478.2331 148506.2216 173548.1274 0.937303433 0.846133364 0.916713912 0.971399706 0.849452778 0.84293066 1.04623398 0.941976359 0.855706275 1 17.40497627 -7.235905126 24.98695952 0.956143893 0.894340976 0.230733796 0.059660991 1291.163092 1263490.207 0.02329147 0.018033499 5.81E-08 7.235905126 -0.061802917 AAS(ph)PPASASDLIEQQQK ddPTM_A459_MK2206_30min_R1 4 AASPPASASDLIEQQQK 17 0 Q5VSL9;Q5VSL9-3;Q5VSL9-2 Q5VSL9 STRIP1 Striatin-interacting protein 1 1 AAS(1)PPASASDLIEQQQK;AAS(1)PPASASDLIEQQQK;AAS(0.984)PPAS(0.016)ASDLIEQQQK;AAS(1)PPASASDLIEQQQK 224.64 3.21E-51 118999000 10931.02 10676.82 11167.8 9346.68 9749.58 8658.18 10126.39 9619.97 9461.08 8481.87 TRUE FALSE 10001.27935 9981.757077 10409.76085 10066.56291 9361.233584 9148.398669 9450.877 9535.863617 10444.59312 9532.66809 1.049158457 1.047110524 1.092009158 1.056006862 0.982016104 0.959689206 0.991419916 1.000335218 1.095663147 1 13.21866435 -6.189860764 6.557284328 1.002015288 1.062827669 0.378297568 0.035206128 0.26732593 20.24985569 0.010961188 0.014182847 6.46E-07 6.189860764 0.060812382 AAS(ph)PPASASDLIEQQQK ddPTM_A459_MK2206_30min_R2 3 AASPPASASDLIEQQQK 17 0 Q5VSL9;Q5VSL9-3;Q5VSL9-2 Q5VSL9 STRIP1 Striatin-interacting protein 1 1 AAS(1)PPASASDLIEQQQK;AAS(1)PPASASDLIEQQQK;AAS(1)PPASASDLIEQQQK 152.07 0.00018642 133958000 97599 119864 104867 128050 109589 102289 125823 82045 97494 121302 TRUE FALSE 105071.2545 113911.7281 108363.2134 117587.9054 105285.9852 106181.6796 109302.289 92768.5632 105973.8519 117343.9257 0.895412812 0.970750956 0.923466748 1.002079185 0.897242739 0.904875808 0.93146951 0.790569794 0.903104709 1 16.84038364 -6.466462789 24.86710927 0.895234257 0.948041845 0.116961039 0.05496171 476.7770562 210154.2342 0.016601151 0.018823849 3.42E-07 6.466462789 0.052807588 AAS(ph)PPRPLLSNASATPVGR ddPTM_A459_MK2206_30min_R2 2 AASPPRPLLSNASATPVGR 19 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AAS(0.981)PPRPLLS(0.004)NAS(0.015)ATPVGR;AAS(0.965)PPRPLLS(0.008)NAS(0.014)AT(0.014)PVGR 54.626 0.033136 296673000 64212 86836 66336 93736 84082 91422 84008 55420 72460 82622 TRUE FALSE 69128.12009 82523.85051 68547.60913 86077.46895 80780.5182 94901.12827 72977.64869 62663.58429 78762.43982 79926.05091 0.864900984 1.032502539 0.857637883 1.076963868 1.010690723 1.187361657 0.913064612 0.784019523 0.985441404 1 16.28637819 -4.744121947 24.37605183 0.980399522 0.864900513 0.098556994 0.10694363 2168.858448 3052663.282 0.028055846 0.791223385 1.80E-05 4.744121947 -0.115499008 AAS(ph)PQDLAGGYTSSLACHR ddPTM_A459_MK2206_30min_R1 2 AASPQDLAGGYTSSLACHR 19 0 P51948;P51948-2;H0YJ92 P51948 MNAT1 CDK-activating kinase assembly factor MAT1 1 AAS(1)PQDLAGGYTSSLACHR;AAS(1)PQDLAGGYTSSLACHR 162.98 5.52E-07 16785100 2749 2522.1 2624.4 2392.05 3546.3 3297.3 3198.5 3038.3 2474.1 2370.9 TRUE FALSE 2515.183114 2357.910832 2446.26304 2576.286105 3405.043362 3483.990277 2985.133901 3011.736463 2731.291549 2664.624991 0.943916357 0.884894062 0.918051526 0.966847535 1.277869634 1.307497411 1.120282933 1.130266538 1.025019114 1 11.37971679 -6.101676219 5.728954581 1.156397779 0.916991953 0.572983318 0.091255462 0.166247512 7.716326147 0.028639083 0.037430958 7.91E-07 6.101676219 -0.239405826 AAS(ph)PQDLAGGYTSSLACHR ddPTM_A459_MK2206_30min_R2 2 AASPQDLAGGYTSSLACHR 19 0 P51948;P51948-2;H0YJ92 P51948 MNAT1 CDK-activating kinase assembly factor MAT1 1 AAS(1)PQDLAGGYTSSLACHR;AAS(1)PQDLAGGYTSSLACHR 256.4 4.04E-40 4205300 9136.4 16382.3 10391.2 17363.5 17058.1 19012.2 15616.6 13363.1 16483.7 13638.4 TRUE FALSE 9835.889809 15568.7788 10737.63742 15944.84651 16388.31328 19735.72259 13566.12166 15109.70305 17917.42243 13193.38012 0.745517048 1.180044739 0.813865539 1.208549011 1.242161836 1.495880692 1.028252164 1.145248822 1.358061563 1 13.68752661 -5.788179929 17.65159995 1.222755157 0.939836372 0.380807166 0.172705254 8.708277435 5748.008854 0.047264116 0.070236624 1.63E-06 5.788179929 -0.282918785 AAS(ph)PSPQSVR ddPTM_A459_MK2206_30min_R1 3 AASPSPQSVR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 AAS(0.884)PS(0.116)PQSVR;AAS(0.928)PS(0.071)PQS(0.001)VR;AAS(0.978)PS(0.022)PQSVR 145.14 0.00091257 427250000 12535.1 13262.5 12872.8 11068 14022.6 12004.3 13935.4 11471.8 11040 10927.2 TRUE FALSE 11468.92392 12399.10884 11999.0302 11920.45928 13464.05015 12683.97309 13005.79489 11371.50326 12187.64751 12280.94403 0.933879667 1.009621802 0.977044612 0.970646821 1.09633674 1.032817433 1.059022406 0.925946998 0.992403147 1 13.58413384 -4.760625304 24.55517025 1.00791672 0.933879569 0.190926258 0.04518557 29.32918289 883978.3649 0.011895075 0.069631841 1.74E-05 4.760625304 -0.074037151 AAS(ph)PSPQSVR ddPTM_A459_MK2206_30min_R2 3 AASPSPQSVR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 AAS(0.883)PS(0.114)PQS(0.003)VR;AAS(0.593)PS(0.407)PQSVR;AAS(0.8)PS(0.155)PQS(0.046)VR 103.43 0.01423 457100000 128951 184358 184999 206060 189031 173234 192267 170625 173334 170727 TRUE FALSE 138823.5877 175203.0498 191166.7743 189224.2388 181608.6931 179826.5413 167022.1119 192926.2733 188410.278 165156.192 0.840559388 1.060832462 1.157490809 1.145729001 1.099617828 1.088827122 1.011297911 1.168144355 1.14080057 1 17.33347153 -4.776145995 3.669882093 1.105642644 0.810033444 0.66882881 0.054691759 0.156635349 3.622470283 0.013787667 0.128347867 1.67E-05 4.776145995 -0.2956092 AAS(ph)PVLLSSNSQK ddPTM_A459_MK2206_30min_R1 3 AASPVLLSSNSQK 13 0 G3V1Z7;P41970 G3V1Z7 ELK3 ETS domain-containing protein Elk-3 1 AAS(1)PVLLSSNSQK;AAS(1)PVLLSSNSQK;AAS(1)PVLLSSNSQK 200.16 0.00011898 27380100 6151.2 6291.4 6276 5377 7180 5987.7 6594.8 6242.5 6123.7 5059.4 TRUE FALSE 5628.008139 5881.828716 5850.002606 5791.137472 6894.005396 6326.7184 6154.872925 6187.922481 6760.280529 5686.196669 0.989766705 1.034404728 1.028807645 1.018455359 1.21241065 1.112645019 1.082423504 1.088235747 1.188893196 1 12.47324828 -6.188367735 24.99597087 1.116856618 1.019822286 0.415423277 0.055853771 138.815651 47484.78526 0.015886667 0.020509596 6.48E-07 6.188367735 -0.097034331 AAS(ph)PVLLSSNSQK ddPTM_A459_MK2206_30min_R2 2 AASPVLLSSNSQK 13 0 G3V1Z7;P41970 G3V1Z7 ELK3 ETS domain-containing protein Elk-3 1 AAS(1)PVLLSSNSQK;AAS(1)PVLLSSNSQK 203.85 4.95E-05 49300000 81894 115980 107059 136085 106259 99038 120478 88287 96434 100640 TRUE FALSE 88163.86761 110220.6019 110628.2936 124966.4202 102086.7378 102806.9605 104659.0939 99826.41403 104821.655 97356.12504 0.905581108 1.132138341 1.136325974 1.283601007 1.048590807 1.055988624 1.075012937 1.02537374 1.076682694 1 16.57098413 -6.424826547 19.7639272 1.049987481 1.123348782 0.119337299 0.088223406 17.15413671 3448.907241 0.027952786 0.03169536 3.76E-07 6.424826547 0.073361301 AAS(ph)PYSQRPAS(ph)PTAIR ddPTM_A459_MK2206_30min_R2 1 AASPYSQRPASPTAIR 16 1 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 2 AAS(0.998)PYS(0.007)QRPAS(0.799)PT(0.195)AIR 156.29 0.0029129 16668000 70707 69921 65035 65528 61544 71775 73863 57854 62511 77058 TRUE FALSE 76120.38228 66448.82481 67203.23444 60174.15279 59127.47333 74506.44792 64164.69937 65415.71644 67948.09379 74543.60377 1.021152432 0.891408806 0.901529186 0.807234286 0.793193116 0.999501555 0.860767338 0.877549691 0.91152145 1 16.18579695 -8.662822574 4.435955497 0.999996007 0.890488547 0.175501217 0.068213929 2.109770772 65.13684665 0.066770225 0.017421631 2.17E-09 8.662822574 -0.10950746 AAS(ph)TDLGAGETVVGK ddPTM_A459_MK2206_30min_R2 1 AASTDLGAGETVVGK 15 0 Q15032-2;Q15032-4;Q15032;Q15032-3;H7C207 Q15032-2 R3HDM1 R3H domain-containing protein 1 1 AAS(0.952)T(0.048)DLGAGETVVGK 179.79 2.01E-05 3184400 16367 19380 23212 15088 15816 10921 16101 13742 11798 14608 TRUE FALSE 17620.0701 18417.61738 23985.87649 13855.26214 15194.98437 11336.60631 13986.91936 15538.12658 12824.16871 14131.34216 1.24687874 1.303316923 1.697353035 0.980463284 1.075268308 0.802231393 0.989779966 1.099550659 0.907498281 1 13.78661087 -5.790935494 24.98414016 0.980466704 1.404596231 0.687741878 0.134747073 111.722773 94632.27161 0.038075331 0.056484329 1.62E-06 5.790935494 0.424129527 AAS(ph)YTEEDENHTAK ddPTM_A459_MK2206_30min_R1 2 AASYTEEDENHTAK 14 0 Q14126 Q14126 DSG2 Desmoglein-2 1 AAS(0.968)YT(0.032)EEDENHTAK;AAS(0.992)YT(0.008)EEDENHTAK 163.62 0.00026676 24174800 6968.4 6355.3 4897.1 5592.8 6496.6 6455 7268.4 7413.6 7941.8 6546.1 TRUE FALSE 6375.700987 5941.568815 4564.698496 6023.558425 6237.826665 6820.476522 6783.538298 7348.783677 8767.37853 7357.080289 0.866607504 0.807598746 0.620449732 0.81874306 0.847867146 0.927062945 0.922042173 0.998872296 1.191692653 1 12.84491762 -7.225809381 0.925426387 1.082457914 0.770928333 0.681596174 0.080436183 0.342725231 0.575753569 0.062318221 0.037044747 5.95E-08 7.225809381 -0.311529581 AASAPAKES(ph)PR ddPTM_A459_MK2206_30min_R1 5 AASAPAKESPR 11 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR 155.14 0.0025183 2042380000 40182.1 42214.7 40016.1 36663.5 34281.5 30874.2 39400.9 39915.8 8905.3 28612.3 TRUE FALSE 36764.40139 39466.51536 37299.91862 39487.32912 32915.99526 32622.27052 36772.53785 39566.82037 9831.037803 32157.00774 1.143278059 1.227306834 1.159931264 1.227954088 1.023602554 1.014468473 1.143531082 1.230426061 0.305719919 1 14.97284555 -8.240901758 24.98580558 0.652859884 1.14360967 0.569870208 0.171468503 455.6309 554316.6197 0.107602633 0.040568491 5.74E-09 8.240901758 0.490749787 AASAPAKES(ph)PR ddPTM_A459_MK2206_30min_R2 4 AASAPAKESPR 11 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR 96.756 0.010953 2808613000 264592 303717 278666 296391 303172 251712 322337 262882 250063 300953 TRUE FALSE 284849.367 288634.8554 287956.5854 272174.9072 291267.944 261291.0765 280013.7647 297241.58 271813.0277 291132.9283 0.978416865 0.991419477 0.989089716 0.934881907 1.00046376 0.897497504 0.961807262 1.020982346 0.933638903 1 18.1513185 -10.67855959 4.001112997 1.00001202 0.968256918 0.071393141 0.035002538 6057895.164 16167899.96 323.9046051 0.008327063 2.10E-11 10.67855959 -0.031755102 AASDGQYENQS(ph)PEATSPR ddPTM_A459_MK2206_30min_R1 1 AASDGQYENQSPEATSPR 18 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 AASDGQYENQS(1)PEATSPR 218.36 2.91E-14 3335200 363.43 390.83 460.37 450.02 492.27 360.23 460.51 503.2 352.94 337.56 TRUE FALSE 332.5183701 365.386896 429.1213671 484.6806184 472.6618435 380.6259113 429.7902181 498.8005755 389.629376 379.3794812 0.876479584 0.96311718 1.131113801 1.277561498 1.245881411 1.003285444 1.132876814 1.314780056 1.027017525 1 8.567497842 -5.176240398 2.993085267 1.15759337 0.891176689 0.413902635 0.106711105 0.243976315 4.136094677 0.028285132 0.097374914 6.66E-06 5.176240398 -0.266416681 AASDGQYENQS(ph)PEATSPR ddPTM_A459_MK2206_30min_R2 2 AASDGQYENQSPEATSPR 18 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 AASDGQYENQS(1)PEATSPR;AASDGQYENQS(1)PEATSPR 139.2 0.00032842 13910100 18400.6 23128 25595 35748 22789.5 25864 26440 22015 25038 22644.9 TRUE FALSE 19809.36408 21979.49715 26448.32453 32827.27405 21894.66972 26848.27264 22968.39624 24892.43609 27215.75998 21905.99877 0.904289473 1.003355172 1.207355337 1.498551807 0.999482834 1.225612807 1.048498016 1.136329658 1.242388456 1 14.41903837 -5.097169946 3.725874307 1.177301708 0.921193337 0.288477668 0.13887907 0.280851684 6.934515416 0.036019498 0.120692867 8.00E-06 5.097169946 -0.256108371 AASDPLLS(ph)SVSPAVSK ddPTM_A459_MK2206_30min_R2 1 AASDPLLSSVSPAVSK 16 0 P19532 P19532 TFE3 Transcription factor E3 1 AASDPLLS(0.498)S(0.498)VS(0.004)PAVSK 75.695 0.030462 30742000 20945 25004 26856 34858 33055 27933 30221 25592 30065 31403 TRUE FALSE 22548.5653 23762.33772 27751.36564 32009.98989 31757.09461 28996.00989 26252.9464 28936.96227 32679.99935 30378.32268 0.742258404 0.782213619 0.913525277 1.053711564 1.045386704 0.954496737 0.864199998 0.952552996 1.075767076 1 14.89075459 -5.331384052 2.858022851 0.98559971 0.752082783 0.706186327 0.058595304 0.159373277 2.513578511 0.017609391 0.047812942 4.66E-06 5.331384052 -0.233516927 AASDPLLSS(ph)VSPAVSK ddPTM_A459_MK2206_30min_R1 3 AASDPLLSSVSPAVSK 16 0 P19532 P19532 TFE3 Transcription factor E3 1 AASDPLLS(0.002)S(0.87)VS(0.128)PAVSK;AASDPLLS(0.204)S(0.685)VS(0.111)PAVSK;AASDPLLS(0.001)S(0.516)VS(0.483)PAVSK 289.87 1.35E-74 134781000 21711 23126.4 25016.7 20346.5 24369.3 20513.9 23450.8 23843.4 20440.9 20466.7 TRUE FALSE 19864.36544 21620.86716 23318.6361 21913.59096 23398.61918 21675.37929 21886.43992 23634.93967 22565.8047 23002.26931 0.863582857 0.939944962 1.013753721 0.952670828 1.017230903 0.942314821 0.951490465 1.027504693 0.98102515 1 14.48948858 -4.867922648 2.970024013 0.983853825 0.854558563 0.635235212 0.028392296 0.202935077 2.900281847 0.007191708 0.057148444 1.36E-05 4.867922648 -0.129295261 AASDPLLSS(ph)VSPAVSK ddPTM_A459_MK2206_30min_R2 3 AASDPLLSSVSPAVSK 16 0 P19532 P19532 TFE3 Transcription factor E3 1 AASDPLLS(0.005)S(0.826)VS(0.169)PAVSK;AASDPLLS(0.004)S(0.856)VS(0.14)PAVSK;AASDPLLS(0.329)S(0.612)VS(0.058)PAVSK 270.78 1.63E-50 186181000 529062 567114 574792 617758 623767 519623 635891 500787 531667 608604 TRUE FALSE 569567.3935 538951.9434 593955.2784 567285.1953 599274.7734 539397.6174 552397.7479 566241.5804 577910.4346 588745.3013 0.967425799 0.915424619 1.008849289 0.963549423 1.017884596 0.916181609 0.938262686 0.961776814 0.981596683 1 19.16728412 -8.480092293 2.898785112 0.99964623 0.960968674 0.13347979 0.031909059 0.50507469 9.478350823 0.030924028 0.008296397 3.31E-09 8.480092293 -0.038677556 AASDPLLSSVS(ph)PAVSK ddPTM_A459_MK2206_30min_R1 1 AASDPLLSSVSPAVSK 16 0 P19532 P19532 TFE3 Transcription factor E3 1 AASDPLLS(0.002)S(0.078)VS(0.919)PAVSK 255.23 4.00E-30 66453000 4333.5 3995.8 4478.8 4019.7 3842.3 3706.8 4302.2 3953 3341 3259.7 TRUE FALSE 3964.913069 3735.672694 4174.791535 4329.29799 3689.253055 3916.675813 4015.208088 3918.439338 3688.308906 3663.536245 1.082263912 1.019690387 1.139552404 1.181726534 1.007019668 1.069097055 1.095992456 1.069578428 1.006761953 1 11.83902117 -8.22906843 3.257619562 0.999422894 1.084704329 0.31041771 0.048037533 0.322328756 6.574108427 0.043993182 0.013170963 5.90E-09 8.22906843 0.085281434 AASDPLLSSVS(ph)PAVSK ddPTM_A459_MK2206_30min_R2 1 AASDPLLSSVSPAVSK 16 0 P19532 P19532 TFE3 Transcription factor E3 1 AASDPLLSSVS(0.999)PAVS(0.001)K 116.73 0.0012357 0 24376 27546 25670 29747 29361 22744 28242 26665 28502 32396 TRUE FALSE 26242.2453 26178.1057 26525.82499 27316.57494 28208.13961 23609.53886 24533.79148 30150.20705 30981.05244 31338.92117 0.837369135 0.835322491 0.846417936 0.871650137 0.900099255 0.75336157 0.782853734 0.96206908 0.988580694 1 14.9356679 -7.863433028 5.800383629 0.987356225 0.834445654 0.758028063 0.039280228 0.11241782 5.390775502 0.024190302 0.0114285 1.37E-08 7.863433028 -0.152910571 AASDS(ph)NPAGPLR ddPTM_A459_MK2206_30min_R1 2 AASDSNPAGPLR 12 0 Q9BUU2-2;Q9BUU2 Q9BUU2-2 METTL22 Methyltransferase-like protein 22 1 AAS(0.405)DS(0.595)NPAGPLR;AAS(0.146)DS(0.854)NPAGPLR 133.98 0.0016654 9975600 2470.4 2956.1 2758.2 2444.5 2516.3 2257.9 2896.4 2716.3 2226 2292.7 TRUE FALSE 2260.279507 2763.657353 2570.981069 2632.775814 2416.070443 2385.740347 2703.186441 2692.551675 2457.400666 2576.736985 0.877186737 1.072541501 0.9977662 1.021747982 0.937647287 0.925876549 1.049073482 1.04494626 0.953687039 1 11.33132957 -7.281661267 24.6942002 1.015672209 0.978545525 0.098960293 0.056437415 1907.210938 2329002.96 0.023727726 0.016021008 5.23E-08 7.281661267 -0.037126685 AASDS(ph)NPAGPLR ddPTM_A459_MK2206_30min_R2 2 AASDSNPAGPLR 12 0 Q9BUU2-2;Q9BUU2 Q9BUU2-2 METTL22 Methyltransferase-like protein 22 1 AAS(0.454)DS(0.546)NPAGPLR;AAS(0.407)DS(0.593)NPAGPLR 142.39 0.0034101 11131000 41002 57490 47408 58517 62504 58188 51091 49378 52477 50480 TRUE FALSE 44141.14465 54635.1302 48988.55906 53735.97391 60049.7789 60402.38511 44382.69033 55831.87414 57041.3546 48832.84173 0.903923325 1.11881939 1.003188783 1.100406448 1.229700684 1.236921362 0.908869702 1.143326339 1.168094106 1 15.57556411 -4.025619175 1.343789083 1.11034487 7.80E-11 0.24451307 0.10035249 12.94269133 4.652929288 0.029527367 32.10951973 9.43E-05 4.025619175 -1.11034487 AASEQQADTS(ph)GGDSPK ddPTM_A459_MK2206_30min_R1 1 AASEQQADTSGGDSPK 16 0 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 1 AASEQQADT(0.029)S(0.971)GGDSPK 248.01 2.83E-29 3463500 949.66 922.68 1208.6 884.93 1023.5 779.2 1149.4 904.98 907.12 1284.3 TRUE FALSE 868.8864301 862.6133643 1126.563599 953.0874619 982.7318277 823.3176306 1072.725623 897.0678553 1001.41837 1443.40878 0.60196837 0.597622362 0.780488255 0.660303218 0.680840966 0.570398103 0.743189066 0.621492586 0.693787085 1 10.49526422 -8.57651228 17.82576498 1.000000001 0.659907153 0.730045546 0.062159398 369.5415838 122822.3462 0.05889901 0.015207654 2.65E-09 8.57651228 -0.340092847 AASEQQADTS(ph)GGDSPK ddPTM_A459_MK2206_30min_R2 1 AASEQQADTSGGDSPK 16 0 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 1 AASEQQADT(0.082)S(0.917)GGDS(0.001)PK 177.66 5.62E-09 0 11198 10788 12542 11282 10630 11451 10941 10181 9531 10565 TRUE FALSE 12055.32749 10252.28361 12960.14402 10360.22451 10212.61279 11886.77583 9504.433558 11511.69166 10359.98915 10220.26492 1.179551371 1.003132863 1.268082983 1.013694322 0.999251279 1.163059463 0.929959608 1.126359419 1.013671293 1 13.31914497 AASEQQADTSGGDS(ph)PK ddPTM_A459_MK2206_30min_R1 1 AASEQQADTSGGDSPK 16 0 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 1 AASEQQADTSGGDS(1)PK 210.98 1.10E-29 0 626.03 685.73 564.13 372.3 297.13 383.76 476.21 419.99 406.62 596.95 TRUE FALSE 572.7828611 641.0888524 525.8384274 400.9746105 285.2946829 405.4881596 444.4428998 416.3180717 448.8896041 670.9046727 0.853747014 0.955558783 0.783775175 0.597662569 0.425238778 0.604390126 0.662453129 0.620532378 0.669081052 1 9.389963982 -2.736875732 10.82465218 0.699081733 0.900441159 0 0.170317532 0 0 0.041844513 0 0.001832839 2.736875732 0.201359426 AASEQQADTSGGDS(ph)PK ddPTM_A459_MK2206_30min_R2 2 AASEQQADTSGGDSPK 16 0 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 1 AASEQQADTSGGDS(1)PK;AASEQQADTS(0.004)GGDS(0.996)PK 219.72 1.56E-39 0 25579 15011.2 15049.4 11925.1 9608 8676.5 14997.8 11845.2 7517 18207.2 TRUE FALSE 27537.34791 14265.76564 15551.13948 10950.78118 9230.741644 9006.690287 13028.57084 13393.40831 8170.815072 17613.10056 1.56345828 0.809951978 0.882930262 0.621740684 0.524083855 0.511363133 0.739709105 0.760423088 0.463905548 1 14.10436128 -2.340375447 1.071610593 0.651441894 199.997243 0.727017184 0.159994556 172.2050753 1.213175532 0.047762412 83172.77825 0.004566932 2.340375447 199.3458011 AASEQQADTSGGDS(ph)PKV ddPTM_A459_MK2206_30min_R1 1 AASEQQADTSGGDSPKV 17 1 U3KQ26 U3KQ26 FOXK1 1 AASEQQADTSGGDS(1)PKV 195.46 1.68E-07 6452200 1559.9 1660.8 1827.8 1744.4 1184.8 1368.2 1328.5 1084.8 1199.3 1303.7 TRUE FALSE 1427.222314 1552.681618 1703.734029 1878.75399 1137.606907 1445.666302 1239.878189 1075.315708 1323.971527 1465.212198 0.974072094 1.059697442 1.162789957 1.282240205 0.776411027 0.986660023 0.846210665 0.733897595 0.903603948 1 10.5168939 -6.272026334 24.98931619 0.8653559 1.118491896 0.560124604 0.106280471 532.363666 1256582.334 0.03377904 0.038689572 5.35E-07 6.272026334 0.253135996 AASGEDSTEEALAAAAAPWEGGPVPGVDRS(ph)PFAK ddPTM_A459_MK2206_30min_R1 2 AASGEDSTEEALAAAAAPWEGGPVPGVDRSPFAK 34 1 F8W7U3;Q641Q2-2;Q641Q2;E7ESD2;A0A087WYF6 F8W7U3 FAM21A WASH complex subunit FAM21A 1 AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK 138.36 5.38E-26 15150400 4673.7 4519.5 4109.5 3238.4 3513.9 3366.4 3557.3 3584.5 3359.7 2885.3 TRUE FALSE 4276.177272 4225.279729 3830.55859 3487.822129 3373.933922 3557.002659 3319.999008 3553.161094 3708.952838 3242.752747 1.318687426 1.302991643 1.181267549 1.075574489 1.040453647 1.096908379 1.0238212 1.095723717 1.143766771 1 11.66300331 -5.465869873 2.122187392 1.069078704 1.320214497 0.863767593 0.038663337 0.110175768 0.958381354 0.01111462 0.030104663 3.42E-06 5.465869873 0.251135793 AASGEDSTEEALAAAAAPWEGGPVPGVDRS(ph)PFAK ddPTM_A459_MK2206_30min_R2 4 AASGEDSTEEALAAAAAPWEGGPVPGVDRSPFAK 34 1 F8W7U3;Q641Q2-2;Q641Q2;E7ESD2;A0A087WYF6 F8W7U3 FAM21A WASH complex subunit FAM21A 1 AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK 90.127 5.39E-09 15048400 33166.3 34841.1 32796.8 38698.3 42075.1 34752.6 35293 27595.3 32172.7 37341.5 TRUE FALSE 35705.53743 33110.94164 33890.22894 35536.5251 40423.02016 36075.13455 30658.98671 31202.10046 34971.02329 36123.04991 0.988441937 0.916615339 0.93818847 0.983763143 1.119036744 0.998673551 0.84873749 0.863772592 0.968108268 1 15.14063209 -8.542364646 22.53747447 1.000000011 0.956518239 0.030935853 0.072178535 5658.41229 6544544.378 0.078025765 0.020146166 2.87E-09 8.542364646 -0.043481772 AASGEDSTEEALAAAAAPWEGGPVPGVDT(ph)SPFAK ddPTM_A459_MK2206_30min_R1 2 AASGEDSTEEALAAAAAPWEGGPVPGVDTSPFAK 34 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0 A0A0A0MR88 FAM21C;FAM21D WASH complex subunit FAM21C;Putative WASH complex subunit FAM21 1 AASGEDSTEEALAAAAAPWEGGPVPGVDT(0.581)S(0.419)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDT(0.613)S(0.387)PFAK 165.12 7.57E-32 9729700 5421.8 4474.4 4976.8 4717.8 4475.4 4309.8 4424.2 4712.5 4217 4257.4 TRUE FALSE 4960.647439 4183.115747 4638.988682 5081.165773 4297.135341 4553.817152 4129.06969 4671.299109 4655.372241 4784.838854 1.036742844 0.874243809 0.969518269 1.061930387 0.898073158 0.951717976 0.862948537 0.976270937 0.972942325 1 12.22425462 AASGFNAMEDAQTLR ddPTM_A459_MK2206_30min_R1 2 AASGFNAMEDAQTLR 15 0 P09525;Q6P452;B4E1S2 P09525 ANXA4 Annexin A4;Annexin 0 ; 224.66 7.61E-08 32610000 2379.6 2345.3 2326.6 1859.78 2610.3 2031.63 2624.2 1996.44 1999.77 1851.83 FALSE TRUE 2177.202524 2192.620544 2168.676874 2003.020578 2506.326224 2146.659135 2449.144406 1978.985336 2207.653248 2081.248681 1.046103978 1.05351204 1.042007567 0.9624129 1.204241591 1.031428466 1.176766827 0.950864428 1.060734965 1 11.02323364 -7.798419134 24.99999499 1.004349879 1.070885793 0.169157505 0.070800218 333.0898577 225179.6531 0.037569859 0.018048693 1.59E-08 7.798419134 0.066535914 AASIENVLQDS(ph)SPEHCGR ddPTM_A459_MK2206_30min_R1 1 AASIENVLQDSSPEHCGR 18 0 K7EPJ5;O60291-4;O60291;O60291-3;O60291-2 K7EPJ5 MGRN1 E3 ubiquitin-protein ligase MGRN1 1 AASIENVLQDS(0.653)S(0.347)PEHCGR 149.82 0.00010583 11143000 4965.5 3747.2 4158.5 4020.8 5190.9 4816.6 5295.3 4782.5 4344.6 4565.5 TRUE FALSE 4543.15815 3503.256599 3876.232606 4330.482713 4984.135461 5089.31173 4942.060199 4740.687107 4796.236717 5131.108608 0.885414537 0.682748479 0.755437646 0.843966293 0.971356454 0.991854221 0.96315642 0.923910887 0.934736932 1 12.32505485 -6.069406413 3.027980468 0.961702665 0.766696592 0.738683795 0.05125189 0.127953423 2.300156413 0.015651398 0.022029192 8.52E-07 6.069406413 -0.195006072 AASIENVLQDS(ph)SPEHCGR ddPTM_A459_MK2206_30min_R2 2 AASIENVLQDSSPEHCGR 18 0 K7EPJ5;O60291-4;O60291;O60291-3;O60291-2 K7EPJ5 MGRN1 E3 ubiquitin-protein ligase MGRN1 1 AASIENVLQDS(0.641)S(0.359)PEHCGR;AASIENVLQDS(0.567)S(0.433)PEHCGR 133.94 0.00027161 10713200 62673 76889 62253 80620 80127 83317 92737 59183 85682 83082 TRUE FALSE 67471.29307 73070.80407 64328.48395 74033.08811 76980.81137 86487.68682 80560.5205 66918.42131 93134.46548 80371.04114 0.839497562 0.909168315 0.800393811 0.921141335 0.95781777 1.076105094 1.002357558 0.832618569 1.158806259 1 16.29438815 -6.177939055 2.491638607 1.002384908 0.856482211 0.421708113 0.081788979 0.303202425 3.687525705 0.025730562 0.034584397 6.64E-07 6.177939055 -0.145902697 AASIENVLQDSS(ph)PEHCGR ddPTM_A459_MK2206_30min_R1 1 AASIENVLQDSSPEHCGR 18 0 K7EPJ5;O60291-4;O60291;O60291-3;O60291-2 K7EPJ5 MGRN1 E3 ubiquitin-protein ligase MGRN1 1 AASIENVLQDS(0.017)S(0.983)PEHCGR 183.25 4.62E-10 11510000 4051.7 3224 3028 2879 3846.1 3446.7 4114 3809.8 2993.1 3048.4 TRUE FALSE 3707.081639 3014.117014 2822.467796 3100.741079 3692.901693 3641.849175 3839.562566 3776.49132 3304.243456 3426.058806 1.082025105 0.879762195 0.823823512 0.905046076 1.077886254 1.062985016 1.120693714 1.102284442 0.964444466 1 11.7423342 -6.259858293 24.93638946 1.063542245 0.912539734 0.420102012 0.07520484 122.6105422 1933775.096 0.023100392 0.028221112 5.50E-07 6.259858293 -0.151002511 AASIENVLQDSS(ph)PEHCGR ddPTM_A459_MK2206_30min_R2 2 AASIENVLQDSSPEHCGR 18 0 K7EPJ5;O60291-4;O60291;O60291-3;O60291-2 K7EPJ5 MGRN1 E3 ubiquitin-protein ligase MGRN1 1 AASIENVLQDS(0.208)S(0.792)PEHCGR;AASIENVLQDS(0.287)S(0.713)PEHCGR 156.41 1.56E-05 12372800 95046 97626 90604 105107 93896 121911 108941 77726 100908 103637 TRUE FALSE 102322.7948 92778.0348 93624.69214 96519.42188 90209.17125 126550.4085 94636.91584 87885.05507 109684.7954 100255.3332 1.020621962 0.92541745 0.933862461 0.962736034 0.899794239 1.262281063 0.943958918 0.876612269 1.09405447 1 16.61331946 AASLNYLNQPS(ph)AAPLQVSR ddPTM_A459_MK2206_30min_R2 1 AASLNYLNQPSAAPLQVSR 19 0 Q9NSK0-5;Q9NSK0;Q9NSK0-3 Q9NSK0-5 KLC4 Kinesin light chain 4 1 AAS(0.37)LNY(0.005)LNQPS(0.624)AAPLQVS(0.001)R 140.31 0.00012011 83040000 19256 25435 18646 31439 22314 20044 27339 26570 22565 22982 TRUE FALSE 20730.25417 24171.93489 19267.64833 28870.33313 21437.84024 20806.78847 23749.35646 30042.79023 24527.66291 22232.09922 0.932446997 1.087253824 0.866658975 1.298587814 0.964274225 0.935889511 1.068246243 1.351324944 1.103254473 1 14.44035656 -7.537162919 24.98235394 1.178330984 1.01984351 0.156612543 0.138147653 365.7118676 639605.0746 0.062333542 0.036007854 2.90E-08 7.537162919 -0.158487474 AASLT(ph)EDRDR ddPTM_A459_MK2206_30min_R2 1 AASLTEDRDR 10 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 AAS(0.182)LT(0.818)EDRDR 145.28 0.015545 0 24190 33870 28071 36669 32677 35185 31795 19432 21434 15656 TRUE FALSE 26042.005 32188.06505 29006.87313 33673.0254 31393.93679 36523.98983 27620.27831 21971.82912 23298.29058 15145.146 1.719495144 2.125305695 1.915258732 2.223354294 2.072871188 2.411597077 1.823704988 1.450750565 1.538333838 1 13.88656787 -8.033044318 1.232555018 1.115590013 2.080489267 0.729987859 0.206315877 0.234200285 0.647036747 0.189637991 0.064780017 9.27E-09 8.033044318 0.964899253 AASLTEDRDR ddPTM_A459_MK2206_30min_R1 1 AASLTEDRDR 10 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 114.89 0.019209 11166000 1503.9 1443.6 1300.4 1234.8 1874.2 1385.3 1458.3 1335.3 669.65 984.08 FALSE TRUE 1375.985408 1349.621378 1212.132471 1329.90451 1799.546645 1463.734489 1361.019468 1323.625613 739.2625139 1105.99526 1.244115104 1.220277723 1.09596534 1.202450461 1.627083506 1.323454577 1.230583455 1.196773314 0.668413818 1 10.11112949 -8.12801557 5.126137887 0.839891846 1.276553432 0.5742802 0.150311482 0.1664425 6.0727577 0.113173538 0.040880703 7.45E-09 8.12801557 0.436661586 AASLTEDRDR ddPTM_A459_MK2206_30min_R2 1 AASLTEDRDR 10 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 104.05 0.038239 1628500 8000.8 10882 9008.8 11462 13267 11914 11993 9895.4 10902 12375 FALSE TRUE 8613.3474 10341.6157 9309.148896 10525.51793 12746.07092 12367.39562 10418.30469 11188.76276 11850.23625 11971.20476 0.719505477 0.863874264 0.777628407 0.879236313 1.0647275 1.03309532 0.870280385 0.934639661 0.989895043 1 13.54728073 -6.001896098 4.78314228 0.976137694 0.797531054 0.68145917 0.05987297 0.121560559 7.676309875 0.018450485 0.026245963 9.96E-07 6.001896098 -0.17860664 AASPPAS(ph)ASDLIEQQQK ddPTM_A459_MK2206_30min_R2 1 AASPPASASDLIEQQQK 17 0 Q5VSL9;Q5VSL9-3;Q5VSL9-2 Q5VSL9 STRIP1 Striatin-interacting protein 1 1 AAS(0.18)PPAS(0.616)AS(0.205)DLIEQQQK 96.745 0.0058697 79545000 20111 22985 22109 28988 26145 20030 22271 21191 23354 24402 TRUE FALSE 21650.71362 21843.59832 22846.10303 26619.58767 25118.41593 20792.25569 19346.79095 23960.73646 25385.28871 23605.76474 0.917179082 0.925350166 0.967818805 1.127673175 1.064079737 0.880812628 0.81957908 1.015037501 1.075385144 1 14.5268516 -1.522978513 0.005493107 1.891327507 9.63E-05 0.024599394 0.089570535 303491.5618 129.4532652 20542.36196 24163.3731 0.029993109 1.522978513 -1.891231212 AASPPRPLLSNAS(ph)ATPVGR ddPTM_A459_MK2206_30min_R1 1 AASPPRPLLSNASATPVGR 19 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AAS(0.001)PPRPLLS(0.012)NAS(0.986)AT(0.001)PVGR 120.53 0.0020668 78440000 3103.9 3633.6 4009.6 3026.7 3726.9 3305.9 3649.9 3106.5 3073.1 2788.6 TRUE FALSE 2839.897006 3397.05198 3737.439523 3259.816958 3578.449681 3493.077201 3406.421831 3079.340198 3392.559742 3134.072821 0.906136254 1.083909715 1.192518406 1.040121639 1.141788939 1.114548832 1.086899388 0.982536263 1.082476361 1 11.61382299 -10.5960604 8.431912015 0.999999999 1.074562664 0.067797833 0.076391433 1.68E-09 1.32E-10 0.074479798 0.018064004 2.53E-11 10.5960604 0.074562665 AASPVLLSS(ph)NSQK ddPTM_A459_MK2206_30min_R2 1 AASPVLLSSNSQK 13 0 G3V1Z7;P41970 G3V1Z7 ELK3 ETS domain-containing protein Elk-3 1 AAS(0.384)PVLLS(0.01)S(0.574)NS(0.031)QK 78.939 0.04009 4297200 14856 18139 17516 21296 19119 15980 22353 14937 14890 13620 TRUE FALSE 15993.38678 17238.24364 18099.9747 19556.04868 18368.29199 16588.1301 19418.02425 16889.31719 16185.10529 13175.58052 1.213865815 1.308347941 1.373751591 1.484264671 1.394116333 1.259005634 1.473788895 1.281865127 1.228416863 1 13.68557891 -8.61488051 1.565026307 1.001743191 1.358914273 0.631300542 0.08215149 0.329134123 1.72914544 0.080936806 0.023516937 2.43E-09 8.61488051 0.357171082 AASPYSQRPAS(ph)PTAIR ddPTM_A459_MK2206_30min_R1 4 AASPYSQRPASPTAIR 16 1 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 AASPYSQRPAS(0.967)PT(0.033)AIR;AASPYS(0.009)QRPAS(0.965)PT(0.025)AIR;AASPYSQRPAS(0.992)PT(0.008)AIR;AASPYSQRPAS(0.92)PT(0.08)AIR 257.46 3.01E-38 47361900 5409.62 4706.58 4961.01 4426.12 5738.53 5590.54 5204.64 4735.32 4703 4883.77 TRUE FALSE 4949.503412 4400.180787 4624.270463 4767.020529 5509.952199 5907.071544 4857.447962 4693.919596 5191.89368 5488.808298 0.901744631 0.80166414 0.842490794 0.868498273 1.003852184 1.076202925 0.884973149 0.855180094 0.945905449 1 12.42227724 -6.110632054 5.439720083 0.955381487 0.845668749 0.414267479 0.062593131 0.258800115 10.77982692 0.020532973 0.026869525 7.75E-07 6.110632054 -0.109712738 AASPYSQRPAS(ph)PTAIR ddPTM_A459_MK2206_30min_R2 3 AASPYSQRPASPTAIR 16 1 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 AASPYSQRPAS(0.897)PT(0.103)AIR;AASPYSQRPAS(0.953)PT(0.047)AIR;AASPYS(0.002)QRPAS(0.994)PT(0.004)AIR 168.42 6.21E-05 67412000 100265 90593 86680 102056 86708 82102 97144 82998 84080 90761 TRUE FALSE 107941.3655 86094.28335 89569.86794 93717.69834 83303.40825 85226.44914 84388.87611 93846.12357 91393.12642 87799.476 1.229407855 0.980578556 1.020164038 1.067406124 0.948791633 0.97069428 0.961154667 1.068868834 1.040930203 1 16.42192471 -4.757347225 24.95880719 1.006651386 1.229408187 0.732199273 0.04044062 65.32431176 398370.3693 0.010697517 0.080041652 1.75E-05 4.757347225 0.222756801 AASPYSQRPASPT(ph)AIR ddPTM_A459_MK2206_30min_R2 1 AASPYSQRPASPTAIR 16 1 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 AASPYSQRPAS(0.112)PT(0.888)AIR 235.78 1.95E-15 2716100 9186.8 9248.1 7859.4 10428 8796.4 11824 10659 7622.1 9546.9 9039.9 TRUE FALSE 9890.148471 8788.852802 8121.428473 9575.999042 8451.009138 12273.97061 9259.460496 8618.334641 10377.27211 8744.928803 1.130958147 1.005022797 0.928701497 1.095034535 0.966389702 1.403552948 1.058837722 0.985523706 1.186661703 1 13.09423092 AASS(ph)PDGFFWTQGSPK ddPTM_A459_MK2206_30min_R2 1 AASSPDGFFWTQGSPK 16 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 AAS(0.267)S(0.733)PDGFFWTQGSPK 204.23 2.67E-07 2484000 17901 15170 16374 17549 13649 11147 16044 11751 12101 15986 TRUE FALSE 19271.51432 14416.67986 16919.90099 16115.19056 13113.07168 11571.2069 13937.40353 13286.89605 13153.52311 15464.37813 1.246187474 0.932250863 1.094121008 1.042084617 0.847953378 0.748249092 0.901258584 0.859193686 0.850569159 1 13.9166612 -6.214922121 4.658850735 0.856096951 1.072789455 0.555413422 0.092239018 0.155869952 7.722157572 0.02668423 0.034159298 6.10E-07 6.214922121 0.216692504 AASS(ph)S(ph)SPGSPVASSPSR ddPTM_A459_MK2206_30min_R2 1 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 2 AAS(0.211)S(0.783)S(0.866)S(0.085)PGS(0.04)PVAS(0.004)S(0.012)PSR 134.75 0.020291 0 13830 15329 11182 14545 14975 10683 13395 9381.5 10883 10767 TRUE FALSE 14888.83543 14567.78415 11554.8023 13356.62697 14387.00626 11089.54905 11636.22041 10607.69426 11829.58367 10415.67367 1.429464469 1.398640607 1.109366774 1.282358433 1.381284275 1.064698204 1.117183658 1.018435734 1.1357483 1 13.34646853 -1.522879022 0.176670434 0.962140018 2.944459671 0.625206985 0.095204554 39.40626463 0.438302905 0.236385382 20.85845672 0.029999981 1.522879022 1.982319653 AASS(ph)SS(ph)PGSPVASSPSR ddPTM_A459_MK2206_30min_R1 1 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 2 AAS(0.105)S(0.79)S(0.105)S(0.663)PGS(0.182)PVAS(0.128)S(0.026)PS(0.001)R 151.49 0.0038471 3057100 1954.6 1725.8 1600.3 1478.3 1598.6 1373.1 1728 1539.7 1276.1 1036.2 TRUE FALSE 1788.351006 1613.450106 1491.676095 1592.158922 1534.924377 1450.843735 1612.728273 1526.238565 1408.755162 1164.572279 1.535629036 1.385444369 1.28087893 1.367161962 1.318015554 1.245816822 1.384824542 1.310557183 1.209676022 1 10.18558447 -14.18568588 0.104295829 2.30E-12 1.55254487 0.76072202 0.064945915 86.35766472 0.650172549 18.99874848 1.034943696 6.52E-15 14.18568588 1.55254487 AASS(ph)SSPGSPVASSPSR ddPTM_A459_MK2206_30min_R1 1 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AAS(0.034)S(0.476)S(0.476)S(0.005)PGS(0.009)PVASSPSR 310.17 4.27E-103 16923000 2929.3 2472.7 2601.4 2398.5 2114.7 2114.6 2275.2 1904.8 1950.8 1825.2 TRUE FALSE 2680.147653 2311.726781 2424.824216 2583.232886 2030.467021 2234.326825 2123.425559 1888.146534 2153.592641 2051.319556 1.306548093 1.126946201 1.182080193 1.259303007 0.989834575 1.089214413 1.035151034 0.920454607 1.049857218 1 11.00233654 -6.265870202 24.98499266 1.014917774 1.209547065 0.733517678 0.060321911 206.162126 1162527.223 0.018594619 0.021800749 5.42E-07 6.265870202 0.194629291 AASS(ph)SSPGSPVASSPSR ddPTM_A459_MK2206_30min_R2 2 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AASS(0.787)S(0.209)S(0.002)PGS(0.001)PVASSPSR;AAS(0.09)S(0.601)S(0.308)SPGSPVASSPSR 282.09 7.70E-64 45283000 180525 224940 187601 218160 201054 205070 168026 140579 163542 136320 TRUE FALSE 194346.1328 213769.8067 193855.5237 200335.6301 193159.6097 212874.0825 145963.9844 158953.158 177766.5875 131871.8896 1.473749511 1.621041508 1.470029165 1.519168572 1.464751968 1.614249127 1.106862007 1.205360434 1.348024876 1 17.00877754 -7.689355502 0.563455286 1.045590168 1.560014746 0.652652236 0.118883337 0.504144904 0.342978496 0.116750028 0.072647693 2.04E-08 7.689355502 0.514424578 AASSLNLS(ph)NGETESVK ddPTM_A459_MK2206_30min_R1 2 AASSLNLSNGETESVK 16 0 G5E948;A0A0D9SEY1;O95819-3;C9J840;A0A0D9SG62;H7C0P6;O95819-2;O95819-5;E7EX83;E7ENQ1;G3XAA2;H7C360;O95819-4;O95819;O95819-6;E7EN19 G5E948;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 AASSLNLS(1)NGETESVK;AASSLNLS(1)NGETESVK 359.98 1.25E-196 27283000 5692.4 5253.4 5502.1 4741.7 4682.6 4406.8 5205.5 5208.2 4901 3955.4 TRUE FALSE 5208.231488 4911.402705 5128.632782 5106.906556 4496.082126 4656.309208 4858.250593 5162.665256 5410.476488 4445.424814 1.171593651 1.104821904 1.153687892 1.148800569 1.011395382 1.047438525 1.092865316 1.16134351 1.217088741 1 12.11810558 -11.958385 2.122339738 2.32E-05 1.119042928 0.285227988 0.058182808 3044799.302 458973.8263 14445822.15 0.015893467 1.10E-12 11.958385 1.119019749 AASSLNLS(ph)NGETESVK ddPTM_A459_MK2206_30min_R2 4 AASSLNLSNGETESVK 16 0 G5E948;A0A0D9SEY1;O95819-3;C9J840;A0A0D9SG62;H7C0P6;O95819-2;O95819-5;E7EX83;E7ENQ1;G3XAA2;H7C360;O95819-4;O95819;O95819-6;E7EN19 G5E948;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 AASSLNLS(0.993)NGET(0.007)ESVK;AASSLNLS(0.997)NGET(0.002)ESVK;AASSLNLS(0.999)NGET(0.001)ESVK;AASSLNLS(0.999)NGET(0.001)ESVK 264 1.79E-39 39809600 130699 139136 133732 153235 137422 120669 168331 117214 121837 137762 TRUE FALSE 140705.4159 132226.7086 138190.5581 140715.2103 132026.1218 125261.1434 146228.9375 132534.2723 132434.162 133266.8372 1.055817178 0.992195143 1.036946333 1.055890672 0.990689991 0.939927336 1.09726426 0.994503021 0.99375182 1 17.02395829 -1.522878745 0.28750472 1.004506671 1.267372667 0.06958272 0.041404945 196.9171834 2.790268056 0.045700043 26.23739838 0.03 1.522878745 0.262865996 AASSPDGFFWT(ph)QGSPKPGTASPK ddPTM_A459_MK2206_30min_R1 1 AASSPDGFFWTQGSPKPGTASPK 23 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 AAS(0.001)S(0.005)PDGFFWT(0.993)QGSPKPGTASPK 120.9 1.46E-05 19560000 2556.7 3049.1 3227.8 2853.7 2425.5 2042.7 2459.8 2796.1 2435.6 2390.6 TRUE FALSE 2339.239239 2850.603036 3008.705929 3073.492468 2328.887199 2158.355909 2295.71123 2771.653992 2688.789336 2686.765576 0.870652527 1.06097944 1.119824504 1.143937713 0.866799552 0.803328704 0.854451632 1.031595022 1.000753233 1 11.39165473 -4.730161519 23.53719898 0.983279562 0.87065106 0.094043988 0.107684106 5963.32336 4486994.581 0.030745556 3.670311323 1.86E-05 4.730161519 -0.112628502 AASSPDGFFWTQGS(ph)PKPGTASPK ddPTM_A459_MK2206_30min_R1 1 AASSPDGFFWTQGSPKPGTASPK 23 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 AASSPDGFFWT(0.041)QGS(0.915)PKPGT(0.041)AS(0.002)PK 80.711 0.0003005 24599000 3458.1 3480.2 4029.2 2964.3 3184.8 2620.7 3008.8 3459.8 3004.6 2548.4 TRUE FALSE 3163.970436 3253.638347 3755.70913 3192.6109 3057.942672 2769.081769 2808.088442 3429.551333 3316.938922 2864.115031 1.104693911 1.136001282 1.311298285 1.114693671 1.067674531 0.966819328 0.980438429 1.197420947 1.15810255 1 11.48387372 -5.993842401 24.84680077 1.065382455 1.184831149 0.293616815 0.084877409 207.95644 839121.0289 0.025900555 0.038305471 1.01E-06 5.993842401 0.119448694 AASSS(ph)SPGSPVASSPSR ddPTM_A459_MK2206_30min_R1 3 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AAS(0.004)S(0.056)S(0.883)S(0.056)PGS(0.002)PVASSPSR;AAS(0.004)S(0.041)S(0.953)S(0.002)PGSPVASSPSR;AASS(0.006)S(0.494)S(0.494)PGS(0.006)PVASSPSR 331.8 7.99E-136 25494800 6607 6762.6 5928.4 5318.5 6787.5 5480.8 6046.2 6197.8 4964.21 4562.06 TRUE FALSE 6045.039955 6322.353511 5525.996725 5728.131792 6517.139502 5791.11816 5642.86903 6143.613288 5480.257394 5127.242435 1.17900412 1.233090417 1.077771686 1.117195425 1.271080817 1.129480073 1.100566065 1.198229529 1.068850842 1 12.3239674 -8.484156603 3.889185742 1.000489942 1.16129077 0.468176819 0.057152545 0.172571491 5.998782757 0.055877055 0.014676991 3.28E-09 8.484156603 0.160800828 AASSSPDS(ph)P ddPTM_A459_MK2206_30min_R2 1 AASSSPDSP 9 0 Q5BKY9-2;Q5BKY9 Q5BKY9-2 FAM133B Protein FAM133B 1 AASSSPDS(1)P 229.55 0.0001674 3627500 29149 31847 26246 33431 37786 31327 36470 34457 31701 34827 TRUE FALSE 31380.66985 30265.52429 27121.02854 30699.58036 36302.33178 32519.17094 31681.44519 38960.64821 34458.29568 33690.59784 0.931437014 0.898337407 0.805002887 0.911221003 1.077521151 0.965229857 0.940364589 1.156424958 1.022786709 1 15.04005841 -6.124731204 5.246931331 1.026923624 0.877092072 0.544660255 0.063371684 0.181232885 6.998561861 0.019606357 0.025654058 7.50E-07 6.124731204 -0.149831552 AASSSS(ph)PGSPVASSPSR ddPTM_A459_MK2206_30min_R2 1 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AAS(0.005)S(0.02)S(0.049)S(0.657)PGS(0.268)PVASSPSR 85.576 0.01165 10635000 19859 48919 31087 57707 45176 99521 36089 24529 67468 27688 TRUE FALSE 21379.42031 46489.75359 32123.42506 52992.1535 43402.16325 103308.3414 31350.47095 27735.02452 73336.24469 26784.54283 0.798199934 1.735693377 1.199326988 1.978460258 1.620418296 3.85701343 1.170468772 1.035486202 2.738006213 1 14.70911305 -5.765159257 24.57394033 1.953456181 1.29353535 0.114259782 0.846471591 174.9045429 1155454.618 0.237352304 0.368109973 1.72E-06 5.765159257 -0.659920831 AASSSSPGS(ph)PVASSPSR ddPTM_A459_MK2206_30min_R1 2 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AASS(0.002)S(0.001)S(0.126)PGS(0.87)PVAS(0.001)SPSR;AAS(0.003)S(0.033)S(0.376)S(0.204)PGS(0.384)PVASSPSR 257.46 4.73E-40 18550000 4275.18 3721.88 3289.84 2976.25 3605.73 3161.51 3230.94 3045.23 3220.68 2724.48 TRUE FALSE 3911.553491 3479.584936 3066.534827 3205.481291 3462.106139 3340.511964 3015.409888 3018.605875 3555.481211 3062.009151 1.277446702 1.136373134 1.001478009 1.046855555 1.130664857 1.090954272 0.984781475 0.98582523 1.161159564 1 11.58026288 -4.876171924 2.957939206 1.051821106 1.29291359 0.587246614 0.058535193 0.229061209 3.277173978 0.015354734 0.118912209 1.33E-05 4.876171924 0.241092483 AASSSSPGS(ph)PVASSPSR ddPTM_A459_MK2206_30min_R2 3 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AASSS(0.002)S(0.15)PGS(0.847)PVASSPSR;AASSSS(0.018)PGS(0.982)PVASSPSR;AAS(0.302)S(0.007)S(0.062)S(0.01)PGS(0.62)PVASSPSR 226.79 3.39E-16 23079500 56319 78659 64968 75478 63102 79113 69280 56215 66244 57442 TRUE FALSE 60630.82594 74752.90844 67134.00069 69311.20596 60624.29842 82123.70065 60183.45278 63562.49351 72005.78338 55567.67224 1.091116894 1.34525895 1.208148515 1.247329664 1.090999424 1.47790428 1.083065933 1.143875404 1.295821482 1 15.76195819 -13.04024172 0.426916097 1.41E-10 1.225721014 0.225549693 0.121415962 365.9810943 8.251290107 331.5356835 0.066432841 9.12E-14 13.04024172 1.225721014 AASSSSPGSPVASS(ph)PSR ddPTM_A459_MK2206_30min_R1 2 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AASSSSPGSPVAS(0.001)S(0.999)PSR;AASSSSPGSPVAS(0.002)S(0.998)PSR 302.4 2.59E-89 65055000 10656.6 8639.1 9143.3 7334.8 9996 8857.9 9763.2 9506.8 7853.2 7791 TRUE FALSE 9750.20021 8076.69302 8522.678271 7899.727567 9597.838153 9359.426643 9111.914742 9423.68305 8669.568243 8756.207899 1.113518583 0.922396215 0.973329821 0.90218593 1.096118121 1.068890409 1.040623389 1.076228792 0.990105345 1 13.09609049 -6.273405223 24.99460691 1.050082036 0.973572688 0.226234088 0.060540588 998.5021901 2085696.313 0.0182029 0.020800741 5.33E-07 6.273405223 -0.076509348 AASSSSPGSPVASS(ph)PSR ddPTM_A459_MK2206_30min_R2 4 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AASSSSPGSPVAS(0.004)S(0.987)PS(0.009)R;AASSSSPGSPVAS(0.043)S(0.945)PS(0.012)R;AASSSSPGS(0.001)PVAS(0.237)S(0.754)PS(0.008)R;AASSSSPGSPVAS(0.008)S(0.992)PSR 270.95 1.18E-51 62610500 62776.7 81909 67630 89601 82737 91994 91364 64419 82273 77468 TRUE FALSE 67582.93242 77841.51817 69884.75045 82280.31168 79488.32966 95494.89613 79367.79705 72838.78448 89428.95682 74940.2255 0.901824514 1.038714758 0.932539901 1.097945878 1.060689758 1.274280875 1.059081375 0.971958437 1.193337173 1 16.1934527 -5.770321334 24.83283375 1.097412145 0.965795226 0.328538521 0.08890749 205.7028547 575120.49 0.024914313 0.037588339 1.70E-06 5.770321334 -0.131616919 AASVAAATT(ph)SPTPR ddPTM_A459_MK2206_30min_R2 2 AASVAAATTSPTPR 14 0 Q9Y2D9 Q9Y2D9 ZNF652 Zinc finger protein 652 1 AASVAAAT(0.054)T(0.455)S(0.455)PT(0.037)PR;AASVAAAT(0.073)T(0.376)S(0.376)PT(0.176)PR 148.18 0.001086 17390800 84723 87719 82003 100338 88356 102454 110355 96423 78151 100972 TRUE FALSE 91209.45802 83363.00202 84736.93909 92140.06443 84886.69949 106352.9588 95865.25594 109025.8172 84948.43272 97677.29191 0.933783649 0.853453248 0.867519333 0.943311005 0.869052549 1.088819691 0.981448749 1.116183865 0.869684561 1 16.57573558 -6.74702815 24.99922068 1.016627706 0.892535699 0.433114095 0.067241135 208.1592845 361094.0641 0.020866955 0.020777762 1.79E-07 6.74702815 -0.124092008 AASVAAATTS(ph)PTPR ddPTM_A459_MK2206_30min_R1 2 AASVAAATTSPTPR 14 0 Q9Y2D9 Q9Y2D9 ZNF652 Zinc finger protein 652 1 AASVAAAT(0.01)T(0.355)S(0.624)PT(0.01)PR;AASVAAATT(0.01)S(0.842)PT(0.147)PR 204.17 2.69E-05 37718000 9782.8 10760 9947.8 7707.3 9959 9525.6 10034.9 8565 8151.3 7641.8 TRUE FALSE 8950.721488 10059.52204 9272.571052 8300.917581 9562.311941 10064.93124 9365.490131 8490.117108 8998.656805 8588.523877 1.042172277 1.171274853 1.079646652 0.966512721 1.113382472 1.17190467 1.090465634 0.988542063 1.047753599 1 13.06819448 -7.748575763 24.27309741 1.013610884 1.092646146 0.278986644 0.057883335 214.6226066 404986.2204 0.028995167 0.016591285 1.78E-08 7.748575763 0.079035261 AASVAAATTS(ph)PTPR ddPTM_A459_MK2206_30min_R2 2 AASVAAATTSPTPR 14 0 Q9Y2D9 Q9Y2D9 ZNF652 Zinc finger protein 652 1 AASVAAAT(0.004)T(0.032)S(0.963)PTPR;AASVAAAT(0.007)T(0.224)S(0.766)PT(0.003)PR 173.33 0.00010617 40921000 235250 254770 223471 245920 222620 251220 258880 216770 191866 246030 TRUE FALSE 253260.9209 242118.4923 230921.4116 225827.5493 213878.8202 260780.3531 224888.745 245102.5833 208554.1579 238002.0612 1.0641123 1.017295779 0.970249629 0.948847032 0.898642722 1.09570628 0.94490251 1.029833868 0.876270385 1 17.86061454 -4.971265399 2.469241105 0.971842268 1.06813487 0.201388169 0.059414774 0.593134462 6.055892187 0.015232821 0.102536736 1.07E-05 4.971265399 0.096292602 AASVPCS(ph)VAPEK ddPTM_A459_MK2206_30min_R1 1 AASVPCSVAPEK 12 0 D6RFX7;Q9C073 D6RFX7 FAM117A Protein FAM117A 1 AAS(0.225)VPCS(0.775)VAPEK 85.845 0.039895 0 1344.7 1284.1 1606 1313.3 1267 919.5 1164.2 1298 1279.7 1169.5 TRUE FALSE 1230.326204 1200.504857 1496.989195 1414.450594 1216.532707 971.5612954 1086.538342 1286.651723 1412.729394 1314.386489 0.936045991 0.913357575 1.138926189 1.076129894 0.925551744 0.739174743 0.826650571 0.978899078 1.074820387 1 10.36017384 AAT(ph)PLPSLR ddPTM_A459_MK2206_30min_R1 2 AATPLPSLR 9 0 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 AAT(0.996)PLPS(0.004)LR;AAT(0.985)PLPS(0.015)LR 120.63 0.015244 18670900 9111.2 9821 9046.5 7324.3 10593.5 9652.3 10122.3 9620.5 7876 7637.1 TRUE FALSE 8336.244595 9181.651115 8432.448785 7888.418855 10171.53846 10198.80488 9447.059836 9536.388983 8694.738385 8583.241605 0.971223342 1.069718358 0.982431717 0.919048912 1.185046272 1.188222976 1.100640093 1.111047483 1.012990055 1 13.06730689 -6.260552039 24.99995267 1.109687559 0.991386934 0.402934383 0.067206844 82.2294279 2316734.916 0.020933515 0.025434871 5.49E-07 6.260552039 -0.118300625 AAT(ph)SPAPGPSDATAR ddPTM_A459_MK2206_30min_R1 1 AATSPAPGPSDATAR 15 0 Q8IXZ2;Q8IXZ2-2 Q8IXZ2 ZC3H3 Zinc finger CCCH domain-containing protein 3 1 AAT(0.5)S(0.5)PAPGPSDATAR 150.9 0.0006005 5747000 2366.5 2010.9 2004.5 1572.3 2201.8 2035.3 2249.1 1821 1641.3 1479.4 TRUE FALSE 2165.216748 1879.990045 1868.440125 1693.398818 2114.097644 2150.536927 2099.066643 1805.079189 1811.919008 1662.679241 1.302245613 1.130699174 1.123752603 1.018475949 1.271500595 1.293416598 1.262460366 1.08564487 1.089758604 1 10.69929416 -7.903924059 6.211861527 1.058676336 1.193803898 0.357694897 0.087492709 0.276698016 14.74864342 0.053429944 0.025250244 1.25E-08 7.903924059 0.135127562 AAT(ph)SPGVGQSAPGTR ddPTM_A459_MK2206_30min_R1 2 AATSPGVGQSAPGTR 15 0 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 AAT(0.5)S(0.5)PGVGQSAPGTR;AAT(0.583)S(0.415)PGVGQS(0.001)APGTR 169.98 0.00013011 21922000 8069.5 6869.4 7337.2 5820.7 7528.7 6695 8190.9 6538.5 6447.4 5889.8 TRUE FALSE 7383.14665 6422.200811 6839.171307 6269.011323 7228.815937 7074.065114 7644.500006 6481.334584 7117.630302 6619.47289 1.11536776 0.970198219 1.033189715 0.947055971 1.092053107 1.068674988 1.154850263 0.979131525 1.075256357 1 12.69250062 -6.29930767 24.99537982 1.065627774 1.014344411 0.113092725 0.061308272 1104.445815 728998.1267 0.018466275 0.020939242 5.02E-07 6.29930767 -0.051283362 AATAARPPAPPPAPQPPS(ph)PTPS(ph)PPRPTLAR ddPTM_A459_MK2206_30min_R1 1 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36-3;Q96B36;H9KV91 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 AATAARPPAPPPAPQPPS(0.982)PT(0.336)PS(0.669)PPRPT(0.013)LAR 59.399 0.033141 7543800 997.92 929.05 1082.8 952.01 1307.9 941.38 938.75 1140.4 862.83 1002.4 TRUE FALSE 913.0416637 868.5686761 1009.302553 1025.333975 1255.803573 994.6801221 876.1277003 1130.429603 952.5242662 1126.58488 0.810450841 0.77097491 0.895895703 0.910125809 1.114699475 0.882916272 0.77768459 1.003412724 0.845497115 1 10.1377403 -5.402250584 3.248624696 0.931557396 0.790162393 0.286424118 0.088510187 0.331814395 6.481037613 0.024702816 0.058345229 3.96E-06 5.402250584 -0.141395003 AATAARPPAPPPAPQPPS(ph)PTPSPPRPTLAR ddPTM_A459_MK2206_30min_R1 2 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36-3;Q96B36;H9KV91 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 AATAARPPAPPPAPQPPS(0.88)PT(0.111)PS(0.004)PPRPT(0.004)LAR;AATAARPPAPPPAPQPPS(0.675)PT(0.145)PS(0.04)PPRPT(0.14)LAR 77.907 3.77E-05 119941000 2206.8 2408.1 2626.2 2778.7 2603.5 1836.86 2107.7 2000.99 1960.64 1736.18 TRUE FALSE 2019.100072 2251.332252 2447.940861 2992.715955 2499.797082 1940.861426 1967.099179 1983.495555 2164.455544 1951.271086 1.034761436 1.153777283 1.254536532 1.533726388 1.281112143 0.99466519 1.008111683 1.016514604 1.109254147 1 10.93019851 -6.759695555 24.9989183 1.025641427 1.261987891 0.464187368 0.121079801 45.99052343 659308.5316 0.045441328 0.043216235 1.74E-07 6.759695555 0.236346464 AATAARPPAPPPAPQPPS(ph)PTPSPPRPTLAR ddPTM_A459_MK2206_30min_R2 1 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36-3;Q96B36;H9KV91 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 AATAARPPAPPPAPQPPS(0.727)PT(0.064)PS(0.023)PPRPT(0.186)LAR 73.934 2.41E-05 50915000 22396 38271 34713 38988 37664 26846 29680 22945 27834 37738 TRUE FALSE 24110.65498 36370.51779 35870.31409 35802.55568 36185.12211 27867.64334 25782.98035 25943.99028 30254.95101 36506.61215 0.660446247 0.996272063 0.982570334 0.980714275 0.991193649 0.763358792 0.706255082 0.710665514 0.828752635 1 15.15587017 -6.77155416 24.93974829 0.777751009 0.932952577 0.181164597 0.121745328 269.342916 664107.6358 0.041926451 0.037396243 1.69E-07 6.77155416 0.155201568 AATAARPPAPPPAPQPPSPT(ph)PS(ph)PPRPTLAR ddPTM_A459_MK2206_30min_R1 1 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36-3;Q96B36;H9KV91 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 AATAARPPAPPPAPQPPS(0.245)PT(0.697)PS(0.529)PPRPT(0.529)LAR 46.399 0.034063 10667000 422.4 644.32 839.32 649.4 827.48 833.87 844.74 677.52 807.01 635.47 TRUE FALSE 386.4726619 602.3746509 782.3492969 699.4169005 794.5197194 881.0829988 788.3889359 671.5965141 890.9015774 714.1968212 0.54112907 0.843429476 1.095425342 0.979305536 1.112466054 1.233669729 1.103881889 0.940352147 1.24741745 1 9.480177902 -4.657770401 1.28560329 1.098850574 0.159811639 0.766402808 0.095016568 0.829090507 0.983391135 0.027836014 1.109509961 2.20E-05 4.657770401 -0.939038935 AATAARPPAPPPAPQPPSPT(ph)PSPPRPTLAR ddPTM_A459_MK2206_30min_R1 1 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36-3;Q96B36;H9KV91 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 AATAARPPAPPPAPQPPS(0.151)PT(0.475)PS(0.345)PPRPT(0.029)LAR 95.68 3.12E-07 39944000 911.62 1120.8 1067.7 1173.9 852.46 544.31 842.08 986.78 987.29 723.35 TRUE FALSE 834.0819319 1047.835716 995.2274988 1264.313981 818.5047131 575.1283618 785.9063797 978.1526865 1089.922329 812.964059 1.025976392 1.288907799 1.224196184 1.5551905 1.006815374 0.707446234 0.96671725 1.203193026 1.340677139 1 9.667047762 AATAARPPAPPPAPQPPSPT(ph)PSPPRPTLAR ddPTM_A459_MK2206_30min_R2 2 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36-3;Q96B36;H9KV91 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 AATAARPPAPPPAPQPPS(0.034)PT(0.605)PS(0.14)PPRPT(0.222)LAR;AATAARPPAPPPAPQPPS(0.043)PT(0.678)PS(0.255)PPRPT(0.025)LAR 103.74 2.75E-08 31887000 64666 56937 56021 63698 56024 49462 60693 45835 50901 55697 TRUE FALSE 69616.87868 54109.59137 57888.71218 58493.66964 53824.21626 51344.31107 52723.93619 51825.79188 55328.27697 53879.61145 1.292082047 1.004268404 1.074408494 1.085636441 0.998971871 0.952945088 0.978550787 0.961881322 1.026887082 1 15.71745183 -2.224230748 1.239186868 1.001572059 199.9999622 0.779004454 0.044334771 507.5473087 1.487894186 0.013964479 286291.9361 0.005967182 2.224230748 198.9983901 AATAS(ph)PTR ddPTM_A459_MK2206_30min_R2 1 AATASPTR 8 0 Q9NPY3 Q9NPY3 CD93 Complement component C1q receptor 1 AAT(0.068)AS(0.932)PTR 126.24 0.0048856 50276000 312120 396670 349360 413950 419900 374870 429400 340670 381890 405160 TRUE FALSE 336016.1472 376971.9446 361007.488 380128.9608 403412.6162 389135.9405 373019.2642 385196.7387 415106.1019 391939.6624 0.857316009 0.961811168 0.921079244 0.969866021 1.029272245 0.992846547 0.951726248 0.982796016 1.059107158 1 18.58027205 -2.806038886 0.483946541 1.003159938 1.18E-12 0.627280542 0.032571732 20.08683235 0.764936365 0.019603728 17.22716328 0.001563008 2.806038886 -1.003159938 AATEALGEKS(ph)PDSATVSGYDIMK ddPTM_A459_MK2206_30min_R1 3 AATEALGEKSPDSATVSGYDIMK 23 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;H0Y7E2;K7EL39;J3QRL2 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 AAT(0.018)EALGEKS(0.982)PDS(0.001)ATVSGYDIMK;AATEALGEKS(0.989)PDS(0.008)AT(0.003)VSGYDIMK;AATEALGEKS(0.941)PDS(0.045)AT(0.013)VSGYDIMK 106.42 1.12E-05 202933600 9463.7 10290 10299.1 8514.6 7391 6570.5 7971.5 9345.7 9266.7 7461.5 TRUE FALSE 8658.762619 9620.11913 9600.025787 9170.395967 7096.600819 6942.516032 7439.73578 9263.99153 10230.00663 8385.886951 1.03253987 1.147179682 1.144783592 1.093551108 0.846255245 0.827880947 0.887173393 1.104712189 1.219907529 1 13.03374767 -6.035580161 22.05577803 0.973516276 1.113252041 0.215821246 0.114953162 230.9713334 143176.3638 0.037977769 0.049069106 9.21E-07 6.035580161 0.139735764 AATEALGEKS(ph)PDSATVSGYDIMK ddPTM_A459_MK2206_30min_R2 3 AATEALGEKSPDSATVSGYDIMK 23 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;H0Y7E2;K7EL39;J3QRL2 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 AAT(0.001)EALGEKS(0.877)PDS(0.083)AT(0.023)VS(0.008)GY(0.007)DIMK;AATEALGEKS(0.997)PDS(0.002)ATVSGYDIMK;AAT(0.003)EALGEKS(0.905)PDS(0.058)AT(0.03)VS(0.002)GY(0.002)DIMK 89.831 9.99E-05 57898000 146156 147642 151019 142310 154847 98051 172444 133182 122559 158115 TRUE FALSE 157345.8157 140310.313 156053.8981 130682.8178 148766.9287 101782.3995 149801.8957 150589.3447 133218.9603 152955.7205 1.028701739 0.917326351 1.020255389 0.85438333 0.97261435 0.665437024 0.979380798 0.984529014 0.870964223 1 17.22275454 -5.758770576 24.99594308 0.899328642 0.981617679 0.135532462 0.097234793 147.8994749 1385187.909 0.026610368 0.04355518 1.74E-06 5.758770576 0.082289037 AATEALGEKSPDS(ph)ATVSGYDIMK ddPTM_A459_MK2206_30min_R2 1 AATEALGEKSPDSATVSGYDIMK 23 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;H0Y7E2;K7EL39;J3QRL2 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 AATEALGEKS(0.102)PDS(0.545)AT(0.061)VS(0.219)GY(0.073)DIMK 87.208 0.00013078 10263000 20564 24448 23169 18987 18527 14438 25896 18267 12286 26270 TRUE FALSE 22138.39565 23233.94787 23941.4429 17435.70136 17799.53689 14987.44821 22495.82409 20654.55962 13354.61407 25412.81205 0.871150961 0.914261193 0.942101285 0.686098859 0.700415871 0.589759535 0.885215853 0.812761672 0.525507136 1 14.63326841 -5.75862624 24.99978275 0.732809565 0.90968018 0.252183434 0.13047461 95.15498713 845603.3982 0.034883592 0.057147605 1.74E-06 5.75862624 0.176870615 AATEALGEKSPDSAT(ph)VSGYDIMK ddPTM_A459_MK2206_30min_R2 1 AATEALGEKSPDSATVSGYDIMK 23 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;H0Y7E2;K7EL39;J3QRL2 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 AATEALGEKS(0.038)PDS(0.13)AT(0.379)VS(0.131)GY(0.322)DIMK 54.857 0.031785 3407300 23162 23332 23519 24008 25442 16598 27350 21586 21213 23494 TRUE FALSE 24935.30053 22173.36681 24303.11172 22046.4696 24443.01924 17229.64852 23758.91215 24407.36432 23058.0684 22727.3927 1.097147431 0.975622989 1.069331271 0.970039542 1.075487169 0.758100533 1.045386616 1.073918361 1.014549654 1 14.47214457 -3.100623506 1.981907134 0.997461237 66.52298654 0.09601856 0.088709392 2516.260724 18.75120461 0.024070002 747385.6046 0.000793189 3.100623506 65.5255253 AATESVPCS(ph)PSPLAGEIR ddPTM_A459_MK2206_30min_R1 2 AATESVPCSPSPLAGEIR 18 0 Q8N9M1-2;Q8N9M1;J3QKZ5;J3QS16;J9JIE4 Q8N9M1-2 C19orf47 Uncharacterized protein C19orf47 1 AATESVPCS(0.96)PS(0.04)PLAGEIR;AAT(0.001)ES(0.002)VPCS(0.996)PS(0.001)PLAGEIR 161.75 9.47E-06 17183600 3436.7 3753 3752.4 2910.9 2982.5 3083.4 2930.3 2803.1 3294.2 2618.4 TRUE FALSE 3144.390618 3508.679018 3497.697543 3135.098022 2863.700709 3257.979443 2734.825034 2778.592792 3636.643878 2942.78716 1.068507659 1.192297923 1.188566265 1.065349905 0.973125324 1.107106721 0.929331578 0.944204471 1.235782162 1 11.52296749 -5.916457214 5.121352021 1.026743444 1.152946525 0.256814647 0.089504798 0.264477234 11.94825016 0.025119297 0.037814455 1.21E-06 5.916457214 0.126203082 AATESVPCS(ph)PSPLAGEIR ddPTM_A459_MK2206_30min_R2 1 AATESVPCSPSPLAGEIR 18 0 Q8N9M1-2;Q8N9M1;J3QKZ5;J3QS16;J9JIE4 Q8N9M1-2 C19orf47 Uncharacterized protein C19orf47 1 AATES(0.184)VPCS(0.538)PS(0.278)PLAGEIR 171.56 5.80E-08 0 13201 14461 11740 14549 14137 16535 14595 11520 11708 15744 TRUE FALSE 14211.67871 13742.88777 12131.40574 13360.30016 13581.91035 17164.25101 12678.65897 13025.70355 12726.34068 15230.27457 0.933120322 0.902340119 0.796532307 0.877219915 0.891770551 1.126982375 0.832464242 0.855250737 0.83559496 1 13.89465433 -4.777764044 6.147762957 0.897851628 0.933990942 0.008599031 0.091454286 0.879719103 124.4215773 0.023457195 0.124840033 1.67E-05 4.777764044 0.036139314 AATESVPCSPS(ph)PLAGEIR ddPTM_A459_MK2206_30min_R1 2 AATESVPCSPSPLAGEIR 18 0 Q8N9M1-2;Q8N9M1;J3QKZ5;J3QS16;J9JIE4 Q8N9M1-2 C19orf47 Uncharacterized protein C19orf47 1 AATESVPCS(0.001)PS(0.999)PLAGEIR;AATESVPCS(0.135)PS(0.865)PLAGEIR 220.42 2.13E-14 28592000 4913.6 4879.6 4344.9 3925.23 4480.2 3957.09 4221.07 3875.64 3982.6 3593.46 TRUE FALSE 4495.672518 4561.937153 4049.980294 4227.551895 4301.744147 4181.137016 3939.490122 3841.755688 4396.605522 4038.644954 1.11316359 1.129571231 1.002806719 1.046774832 1.065145413 1.035282146 0.97544849 0.951248682 1.088633829 1 11.97965561 -3.847118247 0.464266085 1.005432782 1.381402171 0.421386482 0.042666629 10.52609129 0.90449928 0.027873548 2.606569119 0.000142194 3.847118247 0.375969389 AATESVPCSPS(ph)PLAGEIR ddPTM_A459_MK2206_30min_R2 2 AATESVPCSPSPLAGEIR 18 0 Q8N9M1-2;Q8N9M1;J3QKZ5;J3QS16;J9JIE4 Q8N9M1-2 C19orf47 Uncharacterized protein C19orf47 1 AATES(0.003)VPCS(0.067)PS(0.929)PLAGEIR;AATESVPCS(0.003)PS(0.997)PLAGEIR 126.07 0.00079469 2939400 16035.9 19419.5 20120.9 19545.5 17363.2 16508.5 22648 17680.4 15440.5 17158.6 TRUE FALSE 17263.62083 18455.15587 20791.72076 17948.57013 16681.43352 17136.74254 19674.29039 19991.28899 16783.48678 16598.71629 1.040057588 1.111842359 1.252610166 1.081322785 1.004983351 1.032413726 1.185289878 1.204387655 1.011131613 1 14.01878405 -8.412992334 8.925222355 1.000181972 1.113514716 0.247278892 0.075863648 0.482557563 34.00336593 0.078884734 0.020381281 3.86E-09 8.412992334 0.113332744 AATLPHEQR ddPTM_A459_MK2206_30min_R2 1 AATLPHEQR 9 0 Q6PD74-2;Q6PD74 Q6PD74-2 AAGAB Alpha- and gamma-adaptin-binding protein p34 0 97.565 0.033069 0 12901 13961 12085 13203 11352 9961.7 13022 11146 9988.4 15160 FALSE TRUE 13888.71048 13267.71704 12487.90787 12124.27267 10906.26344 10340.79947 11312.19576 12602.82047 10857.17298 14665.33044 0.947043814 0.904699495 0.851525843 0.826730275 0.743676625 0.70511875 0.77135635 0.859361507 0.740329243 1 13.84012196 -5.389292534 1.543376987 0.79105813 0.943760829 0.262027546 0.078636915 0.567355691 2.389248393 0.023076177 0.091528279 4.08E-06 5.389292534 0.152702699 AATS(ph)PAPGPSDATAR ddPTM_A459_MK2206_30min_R1 1 AATSPAPGPSDATAR 15 0 Q8IXZ2;Q8IXZ2-2 Q8IXZ2 ZC3H3 Zinc finger CCCH domain-containing protein 3 1 AAT(0.035)S(0.965)PAPGPSDATAR 135.04 0.00041133 6235200 3147.8 2969.9 3050.3 2542.2 3063.3 2731.7 3010.8 2419.8 2281.8 2445.4 TRUE FALSE 2880.06308 2776.55897 2843.254135 2738.000684 2941.282274 2886.366493 2809.955026 2398.643944 2519.001276 2748.354614 1.047922661 1.01026227 1.034529576 0.996232681 1.070197514 1.050216183 1.02241356 0.872756351 0.916548855 1 11.42435245 -7.682186732 7.323425278 0.921412793 1.033556748 0.642420862 0.035210115 0.123498053 9.574754789 0.016187589 0.009250818 2.08E-08 7.682186732 0.112143955 AATS(ph)PGVGQSAPGTR ddPTM_A459_MK2206_30min_R2 3 AATSPGVGQSAPGTR 15 0 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 AAT(0.049)S(0.95)PGVGQSAPGTR;AAT(0.059)S(0.941)PGVGQSAPGTR;AAT(0.236)S(0.764)PGVGQSAPGTR 130.47 0.0007944 26593100 54965.4 54589.2 51086.6 68663 57018 61467 66766 50277.7 45290.6 63152 TRUE FALSE 59173.59329 51878.37971 52789.80175 63053.01326 54779.18683 63806.16976 57999.544 56849.16802 49229.89452 61091.35541 0.96860829 0.849193464 0.864112466 1.032110236 0.896676567 1.044438601 0.949390362 0.93055994 0.8058406 1 15.89868063 -2.19851831 14.60123407 0.933035367 0.987357227 0 0.075848613 0 0 0.017239868 0 0.006331137 2.19851831 0.05432186 AATTATPAATT(ph)SPK ddPTM_A459_MK2206_30min_R2 1 AATTATPAATTSPK 14 0 Q92766;Q92766-2;A0A087X055;Q92766-5;Q92766-3 Q92766 RREB1 Ras-responsive element-binding protein 1 1 AATTATPAAT(0.003)T(0.871)S(0.126)PK 230.23 6.11E-13 9159700 85103 77654 73327 61782 53153 53628 94724 76568 42202 74551 TRUE FALSE 91618.55111 73797.81528 75771.68558 56734.21297 51065.94615 55668.85112 82286.62502 86575.7005 45872.65368 72118.40698 1.270390667 1.023286819 1.050656674 0.78668145 0.708084777 0.771909051 1.140993381 1.200466069 0.63607414 1 16.13807991 -4.734268921 1.40405125 0.905742728 1.437655807 0.284472886 0.176331184 2.00349839 3.304386695 0.054507931 1.564195502 1.84E-05 4.734268921 0.531913079 AATTATPAATTS(ph)PK ddPTM_A459_MK2206_30min_R1 1 AATTATPAATTSPK 14 0 Q92766;Q92766-2;A0A087X055;Q92766-5;Q92766-3 Q92766 RREB1 Ras-responsive element-binding protein 1 1 AATTATPAATT(0.027)S(0.973)PK 190.57 0.00010251 8126900 2985.8 4923.2 4862.2 3134.6 2616.3 2572.2 3100.5 2880.8 4387.8 3236.9 TRUE FALSE 2731.842031 4602.698785 4532.167411 3376.027435 2512.087231 2717.835741 2893.671302 2855.613469 4843.927512 3637.911609 0.75093689 1.265203578 1.245815703 0.928012497 0.690530035 0.7470868 0.795421003 0.784959553 1.33151325 1 11.82889477 -5.944441075 8.13525977 0.863452083 1.103444312 0.134352366 0.215101535 0.424385013 55.05411902 0.061022824 0.090662763 1.14E-06 5.944441075 0.239992229 AATTATPAATTS(ph)PK ddPTM_A459_MK2206_30min_R2 3 AATTATPAATTSPK 14 0 Q92766;Q92766-2;A0A087X055;Q92766-5;Q92766-3 Q92766 RREB1 Ras-responsive element-binding protein 1 1 AATTATPAATT(0.018)S(0.981)PK;AATTATPAATT(0.162)S(0.838)PK;AATTATPAATT(0.026)S(0.973)PK 261.17 7.33E-36 22133100 155227 135722 126217 112335 91237 89713 164976 124122 77617 131715 TRUE FALSE 167111.2985 128982.2428 130425.0118 103156.8712 87654.57695 93127.09108 143314.453 140345.1716 84367.98636 127417.1503 1.311529084 1.012283217 1.02360641 0.809599578 0.687933898 0.730883487 1.1247658 1.101462175 0.662139956 1 16.95919995 -4.582377407 1.297466294 0.88241988 1.657402474 0.399568892 0.157877312 2.35314003 2.511667381 0.049746692 2.739398369 2.62E-05 4.582377407 0.774982594 AAVAGEDGR ddPTM_A459_MK2206_30min_R2 1 AAVAGEDGR 9 0 B4DY08;G3V4W0;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V576;G3V555;G3V575;A0A0G2JNQ3;B2RXH8;O60812;A0A0G2JPF8;P0DMR1;B7ZW38 B4DY08;G3V2Q1;A0A0G2JNQ3;O60812 HNRNPC;HNRNPCL2;HNRNPCL1;HNRNPCL4;HNRNPCL3 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 3 0 143.89 0.027623 14572000 45681 45184 47083 55168 59788 45121 46522 66108 67972 62260 FALSE TRUE 49178.37248 42940.22826 48652.72372 50660.59793 57440.42271 46838.11127 40413.60552 74748.54258 73884.08169 60228.4613 0.816530448 0.712955758 0.807802867 0.841140498 0.953708952 0.777674047 0.671005114 1.241083384 1.226730355 1 15.87815778 -7.767511532 24.99987908 1.175430245 0.801374423 0.753116482 0.093889223 70.18061926 288936.8067 0.050646153 0.025317216 1.71E-08 7.767511532 -0.374055822 AAVEEGIVLGGGCALLR ddPTM_A459_MK2206_30min_R1 2 AAVEEGIVLGGGCALLR 17 0 P10809 P10809 HSPD1 "60 kDa heat shock protein, mitochondrial" 0 ; 210.15 5.00E-08 14927500 3579.82 3983.2 3833.97 4131.6 4172.01 3988.82 3734.9 3821.75 3613.45 3449.87 FALSE TRUE 3275.337511 3723.892956 3573.730798 4449.816548 4005.830007 4214.663541 3485.751636 3788.336843 3989.081058 3877.265941 0.844754412 0.960443006 0.921714129 1.147668645 1.033158434 1.087019463 0.899023097 0.977063967 1.028838651 1 11.92082398 -4.891318406 1.50211412 1.017723435 0.810320022 0.371217883 0.067666885 1.043642033 2.594549171 0.020373605 0.305420308 1.28E-05 4.891318406 -0.207403413 AAVGQES(ph)PGGLEAGNAK ddPTM_A459_MK2206_30min_R1 4 AAVGQESPGGLEAGNAK 17 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 AAVGQES(1)PGGLEAGNAK;AAVGQES(1)PGGLEAGNAK;AAVGQES(1)PGGLEAGNAK;AAVGQES(1)PGGLEAGNAK 235.02 1.25E-64 179151000 18014.9 16946.1 17707.3 15554.9 15789.9 14627.1 17237 15680.4 14947.8 14974.1 TRUE FALSE 16482.63815 15842.90581 16505.37781 16752.94109 15160.95485 15455.27376 16087.15118 15543.30792 16501.6773 16829.20456 0.979406846 0.941393621 0.980758048 0.995468386 0.900871743 0.918360325 0.955906806 0.92359136 0.980538162 1 14.03867937 -8.491129677 6.526875028 0.999974021 0.949403095 0.260378209 0.028458113 0.235394657 33.10588651 0.028888719 0.007479946 3.23E-09 8.491129677 -0.050570926 AAVGQES(ph)PGGLEAGNAK ddPTM_A459_MK2206_30min_R2 4 AAVGQESPGGLEAGNAK 17 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 AAVGQES(1)PGGLEAGNAK;AAVGQES(1)PGGLEAGNAK;AAVGQES(1)PGGLEAGNAK;AAVGQES(1)PGGLEAGNAK 221.9 4.51E-12 343100000 1182588 1180927 1200988 1350288 1330647 1225504 1471954 1028273 1086883 1271580 TRUE FALSE 1273127.847 1122283.882 1241028.341 1239965.151 1278399.113 1272141.413 1278684.672 1162671.812 1181418.119 1230088.449 1.034988864 0.912360313 1.008893581 1.008029262 1.039274138 1.034186944 1.039506283 0.945193667 0.960433471 1 20.23033062 -4.442869913 23.78838618 0.996060764 4.150612749 0.082072971 0.040490109 3465.141808 956189.0826 0.01040858 42518.4316 3.61E-05 4.442869913 3.154551985 AAVLS(ph)DSEDEEK ddPTM_A459_MK2206_30min_R2 2 AAVLSDSEDEEK 12 0 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 AAVLS(0.747)DS(0.253)EDEEK;AAVLS(0.905)DS(0.095)EDEEK 176.51 0.00010355 9467500 70283 56419 68913 54794 49159 39393 63511 60569 44627 78440 TRUE FALSE 75663.92052 53617.3145 71210.52503 50317.15492 47228.77066 40892.12822 55171.92941 68485.57626 48508.57579 75880.50922 0.997145661 0.706601933 0.938456077 0.663110401 0.622409775 0.538901605 0.727089604 0.902545027 0.639275834 1 16.21144174 -1.74086755 1.041410831 0.72684266 199.9973814 0.187504472 0.145310099 2152.990613 4.041252498 0.045351052 1022592.935 0.018160694 1.74086755 199.2705387 AAVPELSAQPAGS(ph)PR ddPTM_A459_MK2206_30min_R1 1 AAVPELSAQPAGSPR 15 0 A6NIX2 A6NIX2 WTIP Wilms tumor protein 1-interacting protein 1 AAVPELSAQPAGS(1)PR 144.15 0.00037449 8599800 1639.2 1647.3 1633.7 1488.4 1800.5 1409.9 1786.1 1942.3 1720.2 1646.6 TRUE FALSE 1499.777432 1540.060471 1522.808996 1603.036826 1728.782272 1489.72732 1666.952528 1925.318676 1899.020946 1850.593239 0.810430623 0.832198258 0.822876126 0.866228619 0.934177341 0.804999871 0.900766572 1.04037918 1.026168747 1 10.85377211 -7.640121896 3.938179563 1.024988796 0.84869617 0.825901226 0.036226654 0.091740709 2.624004073 0.019389871 0.010496908 2.29E-08 7.640121896 -0.176292626 AAVPS(ph)GASTGIYEALELR ddPTM_A459_MK2206_30min_R2 2 AAVPSGASTGIYEALELR 18 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798;F5H1C3;E5RI09;P09104-2;K7EPM1;K7EKN2;E5RGZ4;F5H0C8;P09104;E5RG95;P13929-3;P13929-2;P13929 P06733;P13929-3 ENO1;ENO2;ENO3 Alpha-enolase;Enolase;Gamma-enolase;Beta-enolase 1 AAVPS(0.941)GAS(0.029)T(0.029)GIYEALELR;AAVPS(0.752)GAS(0.156)T(0.093)GIYEALELR 102.72 0.0022323 2207000 16871.6 25746 18477.3 24791.3 24519.1 25628.4 21700.4 17513.5 19355.9 16934.5 TRUE FALSE 18163.30267 24467.49108 19093.32396 22765.77149 23556.35694 26603.70672 18851.11141 19802.57458 21039.44119 16381.92865 1.108740189 1.493565965 1.165511361 1.389688111 1.437947719 1.623966707 1.150726011 1.208806057 1.284307949 1 13.9998176 -8.643940807 0.82245102 1.008135548 1.354170722 0.287235921 0.156389574 1.009000188 1.468044846 0.152698118 0.054430841 2.27E-09 8.643940807 0.346035174 AAVPSGAS(ph)TGIYEALELR ddPTM_A459_MK2206_30min_R1 5 AAVPSGASTGIYEALELR 18 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798;F5H1C3;E5RI09;P09104-2;K7EPM1;K7EKN2;E5RGZ4;F5H0C8;P09104;E5RG95;P13929-3;P13929-2;P13929 P06733;P13929-3 ENO1;ENO2;ENO3 Alpha-enolase;Enolase;Gamma-enolase;Beta-enolase 1 AAVPS(0.138)GAS(0.802)T(0.06)GIYEALELR;AAVPS(0.173)GAS(0.805)T(0.022)GIYEALELR;AAVPS(0.002)GAS(0.937)T(0.061)GIYEALELR;AAVPS(0.003)GAS(0.499)T(0.499)GIYEALELR;AAVPS(0.349)GAS(0.558)T(0.093)GIYEALELR 208.85 1.48E-11 27680400 4527.08 4727.52 4655.23 4271.84 5538.22 4215.64 5419.75 4339.33 3746.07 3617.15 TRUE FALSE 4142.028073 4419.757589 4339.245958 4600.857857 5317.62097 4454.325894 5058.208366 4301.391695 4135.487382 4065.26985 1.018881458 1.087199067 1.067394323 1.131747221 1.308061006 1.095702391 1.244249103 1.058082699 1.017272539 1 11.98913541 -7.987756659 24.56966592 1.018316681 1.137576428 0.29885158 0.080074939 228.0909591 457727.3437 0.046043477 0.022093942 1.03E-08 7.987756659 0.119259747 AAVPSGAS(ph)TGIYEALELR ddPTM_A459_MK2206_30min_R2 6 AAVPSGASTGIYEALELR 18 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798;F5H1C3;E5RI09;P09104-2;K7EPM1;K7EKN2;E5RGZ4;F5H0C8;P09104;E5RG95;P13929-3;P13929-2;P13929 P06733;P13929-3 ENO1;ENO2;ENO3 Alpha-enolase;Enolase;Gamma-enolase;Beta-enolase 1 AAVPS(0.011)GAS(0.746)T(0.243)GIYEALELR;AAVPS(0.049)GAS(0.912)T(0.039)GIYEALELR;AAVPS(0.053)GAS(0.698)T(0.25)GIYEALELR;AAVPS(0.003)GAS(0.917)T(0.081)GIYEALELR;AAVPS(0.01)GAS(0.82)T(0.17)GIYEALELR;AAVPS(0.017)GAS(0.8)T(0.182)GIYEALELR 104.78 0.0035026 4286600 23171.2 26059.5 26353.1 24526.2 26000.7 29593.1 31800.4 24074.7 27490.1 27241.6 TRUE FALSE 24945.20489 24765.42312 27231.6992 22522.331 24979.78187 30719.28616 27624.96928 27221.34595 29881.13921 26352.70882 0.946589782 0.939767646 1.03335484 0.85464956 0.947901866 1.165697476 1.048278166 1.032961967 1.133892512 1 14.68566365 -6.696202269 11.7868887 1.076446945 0.944003969 0.547814279 0.059833247 0.504339254 89.46383598 0.019306203 0.019299661 2.01E-07 6.696202269 -0.132442977 AAVPSGASTGIY(ph)EALELR ddPTM_A459_MK2206_30min_R1 2 AAVPSGASTGIYEALELR 18 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798;F5H1C3;E5RI09;P09104-2;K7EPM1;K7EKN2;E5RGZ4;F5H0C8;P09104;E5RG95;P13929-3;P13929-2;P13929 P06733;P13929-3 ENO1;ENO2;ENO3 Alpha-enolase;Enolase;Gamma-enolase;Beta-enolase 1 AAVPSGAS(0.002)T(0.116)GIY(0.882)EALELR;AAVPSGAST(0.001)GIY(0.999)EALELR 217.2 4.69E-13 24410000 4582.4 4404 4822.2 3619.5 4338.7 4418.4 4815.5 4238.9 3693.5 3419.8 TRUE FALSE 4192.642817 4117.2988 4494.882499 3898.274517 4165.880392 4668.56599 4494.266781 4201.839744 4077.452542 3843.470642 1.090848144 1.071245024 1.169485321 1.014258955 1.083885056 1.214674554 1.169325123 1.093241015 1.060877764 1 11.90819393 -8.487205001 2.207268414 1.001558676 1.115319975 0.303322889 0.054592307 0.396533165 4.352883702 0.055679145 0.01540724 3.26E-09 8.487205001 0.113761299 AAVPSGASTGIY(ph)EALELR ddPTM_A459_MK2206_30min_R2 1 AAVPSGASTGIYEALELR 18 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798;F5H1C3;E5RI09;P09104-2;K7EPM1;K7EKN2;E5RGZ4;F5H0C8;P09104;E5RG95;P13929-3;P13929-2;P13929 P06733;P13929-3 ENO1;ENO2;ENO3 Alpha-enolase;Enolase;Gamma-enolase;Beta-enolase 1 AAVPSGAS(0.002)T(0.066)GIY(0.932)EALELR 137.81 0.0026239 0 5323.2 5495.9 4941.5 5949.2 7168.8 6253.2 5885.3 5386.2 5832.1 5852.3 TRUE FALSE 5730.748285 5222.981598 5106.247144 5463.131329 6887.316892 6491.169908 5112.55304 6090.194834 6339.365516 5661.33993 1.012260058 0.922569862 0.901950281 0.964989101 1.216552437 1.14657837 0.903064134 1.075751484 1.119764154 1 12.46692784 -6.027976773 24.33820118 1.076912168 0.941654126 0.358166395 0.083219497 574.1773464 499501.1047 0.025723977 0.033299819 9.38E-07 6.027976773 -0.135258042 AAVPSGASTGIYEALELR ddPTM_A459_MK2206_30min_R1 1 AAVPSGASTGIYEALELR 18 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798;F5H1C3;E5RI09;P09104-2;K7EPM1;K7EKN2;E5RGZ4;F5H0C8;P09104;E5RG95;P13929-3;P13929-2;P13929 P06733;P13929-3 ENO1;ENO2;ENO3 Alpha-enolase;Enolase;Gamma-enolase;Beta-enolase 0 288.29 1.70E-79 36959000 1268.3 1507.4 1412.7 1349.4 1348.6 1658.1 1408 1450.3 918.15 1242.8 FALSE TRUE 1160.424425 1409.267986 1316.80986 1453.331022 1294.882406 1751.980189 1314.074889 1437.62018 1013.594978 1396.767447 0.830792862 1.008949621 0.942755262 1.040496058 0.927056547 1.254310582 0.94079719 1.029248057 0.725671965 1 10.44787613 -8.224172409 24.89044195 0.862835686 1.001252807 0.163884988 0.12070117 780.9485796 521593.6031 0.078127242 0.029527563 5.97E-09 8.224172409 0.138417121 AAVPSGASTGIYEALELR ddPTM_A459_MK2206_30min_R2 2 AAVPSGASTGIYEALELR 18 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798;F5H1C3;E5RI09;P09104-2;K7EPM1;K7EKN2;E5RGZ4;F5H0C8;P09104;E5RG95;P13929-3;P13929-2;P13929 P06733;P13929-3 ENO1;ENO2;ENO3 Alpha-enolase;Enolase;Gamma-enolase;Beta-enolase 0 ; 203.32 1.19E-09 11942000 16958.9 12441.5 15366 16181.7 16157.3 18366.8 16419.5 11139.9 17255.7 18580.4 FALSE TRUE 18257.28642 11823.6732 15878.29477 14859.60335 15522.88322 19065.76144 14263.59993 12595.92318 18756.56959 17974.12307 1.015753945 0.657816415 0.883397466 0.826722021 0.863623953 1.060733888 0.79356305 0.700780958 1.043531833 1 14.13363377 -6.528304086 24.99620139 0.900807261 0.836414318 0.056714271 0.131779794 527.2291463 2429081.251 0.042962071 0.043098772 2.96E-07 6.528304086 -0.064392943 AAVQELSS(ph)SILAGEDPEER ddPTM_A459_MK2206_30min_R1 2 AAVQELSSSILAGEDPEER 19 0 E7ES96;P49768-7;P49768-2;P49768 E7ES96 PSEN1 Presenilin;Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12 1 AAVQELSS(0.787)S(0.213)ILAGEDPEER;AAVQELS(0.003)S(0.987)S(0.01)ILAGEDPEER 324.79 1.67E-135 8606600 2232.7 1710.7 1479.47 1694.16 2396.8 2349.5 2628.7 2178.9 2659.4 2288.9 TRUE FALSE 2042.797141 1599.333119 1379.047698 1824.644497 2301.330381 2482.52666 2453.344219 2159.850107 2935.854147 2572.466212 0.794100669 0.621712002 0.536080004 0.70929775 0.894600819 0.965037616 0.953693466 0.839602906 1.141260528 1 11.32893641 -6.289245794 2.659588294 0.966244309 0.644358915 0.727210033 0.091483312 0.149400109 2.096502389 0.029897074 0.036960699 5.14E-07 6.289245794 -0.321885394 AAVQELSS(ph)SILAGEDPEER ddPTM_A459_MK2206_30min_R2 1 AAVQELSSSILAGEDPEER 19 0 E7ES96;P49768-7;P49768-2;P49768 E7ES96 PSEN1 Presenilin;Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12 1 AAVQELS(0.065)S(0.887)S(0.048)ILAGEDPEER 202.94 1.15E-15 1836100 21565 16387 17305 17015 13917 17468 24133 12478 18572 17864 TRUE FALSE 23216.03298 15573.24541 17881.94006 15624.82007 13370.54865 18132.75698 20964.30811 14108.91744 20187.35899 17281.09914 1.343434974 0.901172158 1.034768675 0.904156613 0.773709389 1.04928262 1.21313511 0.816436346 1.168175636 1 14.07690736 -4.753692526 24.88415124 0.980437446 1.343435668 0.392488101 0.133866616 277.0985331 890008.658 0.032972406 0.344585469 1.76E-05 4.753692526 0.362998221 AAVVT(ph)SPPPTTAPHK ddPTM_A459_MK2206_30min_R1 1 AAVVTSPPPTTAPHK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;P35611-5;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 P35611 ADD1 Alpha-adducin 1 AAVVT(0.908)S(0.092)PPPTTAPHK 158.86 0.00033343 52992000 8305.4 7789.9 7342.9 5143.8 6573.1 5157.8 5974.4 6099.9 5243.9 5084.9 TRUE FALSE 7598.982117 7282.776094 6844.484406 5539.976367 6311.279508 5449.830179 5575.858677 6046.569217 5789.02217 5714.855801 1.329689214 1.27435868 1.197665286 0.969399152 1.104363737 0.953625143 0.97567793 1.058044057 1.01297782 1 12.48050138 -5.561697873 2.671340546 1.012302527 1.302022915 0.873507418 0.045608112 0.087217677 1.249085997 0.012865933 0.027649618 2.74E-06 5.561697873 0.289720388 AAVVTS(ph)PPPTTAPHK ddPTM_A459_MK2206_30min_R1 2 AAVVTSPPPTTAPHK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;P35611-5;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 P35611 ADD1 Alpha-adducin 1 AAVVT(0.1)S(0.9)PPPTTAPHK;AAVVT(0.151)S(0.849)PPPTTAPHK 118.5 0.0013342 475440000 24523 22078.5 20804.4 16013.6 18228.1 14489.6 16787.3 15147.1 13932.2 12814.1 TRUE FALSE 22437.19007 20641.18564 19392.25529 17246.97025 17502.03618 15309.98863 15667.44985 15014.6705 15380.50205 14401.60745 1.557964287 1.433255677 1.346534084 1.197572584 1.215283519 1.063074985 1.08789591 1.042569071 1.067971204 1 13.81394223 -4.690817462 0.414387448 1.012926947 2.018182883 0.972498963 0.029562065 0.8159768 0.104104016 0.022156188 0.414925601 2.04E-05 4.690817462 1.005255936 AAVVTS(ph)PPPTTAPHK ddPTM_A459_MK2206_30min_R2 7 AAVVTSPPPTTAPHK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;P35611-5;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 P35611 ADD1 Alpha-adducin 1 AAVVT(0.094)S(0.906)PPPTTAPHK;AAVVT(0.192)S(0.808)PPPTTAPHK;AAVVT(0.262)S(0.738)PPPTTAPHK;AAVVT(0.231)S(0.769)PPPTTAPHK;AAVVT(0.436)S(0.564)PPPTTAPHK;AAVVT(0.062)S(0.938)PPPTTAPHK;AAVVT(0.432)S(0.568)PPPTTAPHK 136.63 0.00026784 1021120000 525008 584688 505293 543974 467422 422291 458670 337108 356281 365806 TRUE FALSE 565203.0161 555653.2441 522139.2164 499529.5841 449068.6637 438361.5799 398446.078 381169.1731 387269.6774 353869.7802 1.597206226 1.570219542 1.475512309 1.411619788 1.26902236 1.238765231 1.125968083 1.077145307 1.094384712 1 18.43285904 -6.220388467 0.485769011 1.01200119 1.696292889 0.990906528 0.019533325 0.112906148 0.050152011 0.015905453 0.037934596 6.02E-07 6.220388467 0.684291699 AAVYYMVT(ph)T(ph)IIAVFIGILMVT(ph)IIHPGK ddPTM_A459_MK2206_30min_R2 1 AAVYYMVTTIIAVFIGILMVTIIHPGK 27 0 M0R106;M0R063;P48664-2;P48664 M0R106 SLC1A6 Amino acid transporter;Excitatory amino acid transporter 4 3 AAVY(0.49)Y(0.49)MVT(0.51)T(0.51)IIAVFIGILMVT(0.999)IIHPGK 41.208 0.045129 0 1918.1 2516.2 2449.9 799.29 3376.2 2611.8 929.24 1825.1 1218 2374 TRUE FALSE 2064.951211 2391.249167 2531.578443 733.9854502 3243.633424 2711.193879 807.2296718 2063.646837 1323.939438 2296.536574 0.899158861 1.041241491 1.102346234 0.319605382 1.41240225 1.180557675 0.351498722 0.898590887 0.576493949 1 11.16524404 -7.240731291 24.88588254 0.698195045 0.988251396 0.170280868 0.308867376 1401.187303 1683874.658 0.117354775 0.090797754 5.74E-08 7.240731291 0.290056351 AAWSLVLR ddPTM_A459_MK2206_30min_R1 3 AAWSLVLR 8 0 Q96KJ9 Q96KJ9 COX4I2 "Cytochrome c oxidase subunit 4 isoform 2, mitochondrial" 0 ;; 107.32 0.018761 12022400 5727.87 5302.48 6182.8 5225.74 5893.5 5622.33 5541 5386.84 4755.64 4248.82 FALSE TRUE 5240.684578 4957.287588 5763.128762 5628.2274 5658.749415 5940.661466 5171.37 5339.743426 5250.005796 4775.195899 1.097480541 1.038132821 1.206888447 1.178638012 1.185029795 1.244066546 1.082964995 1.118224998 1.099432548 1 12.2213442 -8.62098609 0.993823542 1.00189648 1.152212479 0.375456475 0.057943184 0.780515108 1.649118288 0.06002475 0.019833234 2.39E-09 8.62098609 0.150315998 AAYEAELGDAR ddPTM_A459_MK2206_30min_R1 2 AAYEAELGDAR 11 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 166.09 0.0085187 17896100 3490 2978.4 3131.6 3176.4 3514.4 3432.8 3531.5 2967.8 3037.5 3180.2 FALSE TRUE 3193.157173 2784.505619 2919.035717 3421.046878 3374.414006 3627.162169 3295.920079 2941.852837 3353.258995 3574.187185 0.89339394 0.779059818 0.816699173 0.957153809 0.944106683 1.014821547 0.922145346 0.823083035 0.938187851 1 11.80339948 -5.757860336 24.9898424 0.937610481 0.824651834 0.465674369 0.055228202 85.7518983 598731.0285 0.015990891 0.026363408 1.75E-06 5.757860336 -0.112958646 AAYEAELGDAR ddPTM_A459_MK2206_30min_R2 4 AAYEAELGDAR 11 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ;;; 187.5 0.00026769 41584700 215953 256338 236651 250005 259248 246751 250044 210763 227204 242497 FALSE TRUE 232486.5277 243608.6277 244540.8262 229578.7918 249068.6209 256141.2822 217212.9224 238310.4478 246965.7932 234584.3427 0.99105731 1.038469255 1.042443086 0.978662041 1.061744437 1.091894196 0.925948083 1.015883861 1.052780379 1 17.8397472 -9.81262507 7.808982932 0.999952671 1.022108615 0.021293261 0.044944777 0 0 0.043642509 0.010584863 1.54E-10 9.81262507 0.022155944 AAYLQETGKPLDETLKK ddPTM_A459_MK2206_30min_R1 2 AAYLQETGKPLDETLKK 17 2 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 0 ; 67.136 0.025086 62558000 5601.3 5823.9 6099.3 5535.2 5505 4397.1 4976.6 5153.4 4743.7 4606 FALSE TRUE 5124.880021 5444.763051 5685.29651 5961.522063 5285.724193 4646.060002 4644.620094 5108.344367 5236.82459 5176.626054 0.990003908 1.051797637 1.098262932 1.151623085 1.021075144 0.897507364 0.897229208 0.986809616 1.011628914 1 12.33779639 -6.530564352 12.11590682 0.954539604 1.074868439 0.517561675 0.052035771 0.32039145 492.8493409 0.018317332 0.018604415 2.95E-07 6.530564352 0.120328835 ACANPAAGSVILLENLR ddPTM_A459_MK2206_30min_R1 1 ACANPAAGSVILLENLR 17 0 P00558-2;P00558 P00558-2 PGK1 Phosphoglycerate kinase 1 0 152.11 0.002558 9334800 1555 1941.7 1965.1 2017.9 2018.1 2033.9 1917.3 1876.2 1398.7 1368.7 FALSE TRUE 1422.739084 1815.294977 1831.714487 2173.319008 1937.714804 2149.05766 1789.400415 1859.796581 1544.09987 1538.264889 0.924898627 1.180092577 1.190766623 1.412837947 1.259675637 1.397066055 1.16325896 1.209022317 1.003793223 1 10.58708824 -8.243961797 3.486158033 0.992099675 1.229593675 0.308729393 0.12802358 0.291237963 7.134754318 0.116731316 0.034731243 5.70E-09 8.243961797 0.237494001 ACANPAAGSVILLENLR ddPTM_A459_MK2206_30min_R2 2 ACANPAAGSVILLENLR 17 0 P00558-2;P00558 P00558-2 PGK1 Phosphoglycerate kinase 1 0 ; 148.85 0.0045143 4457500 12085.1 13935.9 16514.9 16001.8 14439.8 16899.2 16597.7 12337.4 16689.3 13913.2 FALSE TRUE 13010.34455 13243.86347 17065.49852 14694.40175 13872.8209 17542.3109 14418.40205 13949.94054 18140.90515 13459.21342 0.966649695 0.983999811 1.267941743 1.091772698 1.030730434 1.303368209 1.071266321 1.036460312 1.347842892 1 13.71630648 -5.136628147 8.355864036 1.142085869 0.971398354 0.251038421 0.116416879 0.379556411 23.87616365 0.028283536 0.075556493 7.30E-06 5.136628147 -0.170687515 ACASPS(ph)AQVEGS(ph)PVAGSDGSQPAVK ddPTM_A459_MK2206_30min_R2 1 ACASPSAQVEGSPVAGSDGSQPAVK 25 0 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 2 ACAS(0.305)PS(0.695)AQVEGS(1)PVAGSDGSQPAVK 105.74 1.27E-06 8660800 27527 30263 29151 35276 34337 29816 34689 28539 24011 34652 TRUE FALSE 29634.48828 28760.18343 30122.87979 32393.83796 32988.75685 30950.66877 30134.29263 32269.14529 26099.43338 33521.30808 0.88404928 0.857967218 0.898618864 0.966365569 0.984113054 0.923313276 0.898959329 0.962645766 0.778592331 1 15.03279083 -5.526559102 22.57156629 0.92984555 0.872829422 0.144427696 0.058734241 57.47132497 352467.9932 0.015602505 0.027250133 2.97E-06 5.526559102 -0.057016127 ACDHCLR ddPTM_A459_MK2206_30min_R2 1 ACDHCLR 7 0 C9IYN9;Q6GMV2 C9IYN9 SMYD5 SET and MYND domain-containing protein 5 0 93.262 0.036446 269130 2394 1139.3 781.57 2124.6 2000.3 2116.2 750.14 3845.3 2355.3 989 FALSE TRUE 2577.286481 1082.724019 807.6271537 1951.013384 1921.758171 2196.733474 651.6457169 4347.893913 2560.159737 956.729011 2.693852126 1.131693516 0.844154556 2.039253918 2.008675549 2.296087449 0.681118383 4.544540683 2.675950773 1 9.901966536 -7.743957292 24.9999771 2.957685686 1.669399125 0.183274533 1.003544906 310.9080659 444610.255 0.453531123 0.261080759 1.80E-08 7.743957292 -1.288286561 ACFHCETCK ddPTM_A459_MK2206_30min_R1 2 ACFHCETCK 9 0 Q14847;Q14847-2;F6S2S5;K7ESD6 Q14847 LASP1 LIM and SH3 domain protein 1 0 ; 163.99 0.0069593 16532700 9794.9 9568.8 9137.7 8014.8 8244.5 7877.4 9717.4 8456.9 5727.3 8817.3 FALSE TRUE 8961.79232 8945.869381 8517.458383 8632.101285 7916.104107 8323.41158 9069.169976 8382.962215 6322.67333 9909.653691 0.904349698 0.902742887 0.859511205 0.871080015 0.798827522 0.839929612 0.91518536 0.845938968 0.638031714 1 13.27461893 -5.475969809 1.368139494 0.836552238 0.90981299 0.067647649 0.086426642 1.44938443 4.853034564 0.027169348 0.102718495 3.34E-06 5.475969809 0.073260752 ACFHCETCK ddPTM_A459_MK2206_30min_R2 3 ACFHCETCK 9 0 Q14847;Q14847-2;F6S2S5;K7ESD6 Q14847 LASP1 LIM and SH3 domain protein 1 0 ;; 126.24 0.0068158 22603900 247801 271559 260770 301560 281110 255597 294190 235455 256336 297845 FALSE TRUE 266772.8351 258073.7749 269463.9416 276921.5834 270072.2089 265323.9229 255562.4996 266229.7769 278631.6419 288126.342 0.92588839 0.895696565 0.935228413 0.961111648 0.937339526 0.920859652 0.886980683 0.924003599 0.967046747 1 18.13634204 -8.454860916 2.925051779 0.999234062 0.923268993 0.618486344 0.019719107 0.172086742 3.086086474 0.021001072 0.005639995 3.51E-09 8.454860916 -0.07596507 ACKVDS(ph)PTVTTTLK ddPTM_A459_MK2206_30min_R1 1 ACKVDSPTVTTTLK 14 1 Q07866-6;Q07866-4;Q07866-7;G3V5R9;Q07866-9;H0YG16;G3V3H3;Q07866-3;G3V2E7;Q07866-10;Q07866-5;Q07866;Q07866-2;Q07866-8;G5E9S8;F8W6L3;E7EVH7;H0YJT3;H0YJL0;H0YJU9 Q07866-6 KLC1 Kinesin light chain 1 1 ACKVDS(0.982)PT(0.017)VTTTLK 215.93 6.61E-08 9196100 2160.2 2193 2295 2352.6 1999.9 1428.7 1833.3 2256.7 1510.2 1233.9 TRUE FALSE 1976.463646 2050.235301 2139.221794 2533.79766 1920.239748 1509.591759 1711.003902 2236.96991 1667.190694 1386.764847 1.425233449 1.478430395 1.542598803 1.827128561 1.384690239 1.088570829 1.233809687 1.613085242 1.20221586 1 10.43750746 -6.515944671 24.88582987 1.262955582 1.565813864 0.438181599 0.179696491 328.6043138 1179339.414 0.059689429 0.061945356 3.05E-07 6.515944671 0.302858283 ACKVDS(ph)PTVTTTLK ddPTM_A459_MK2206_30min_R2 1 ACKVDSPTVTTTLK 14 1 Q07866-6;Q07866-4;Q07866-7;G3V5R9;Q07866-9;H0YG16;G3V3H3;Q07866-3;G3V2E7;Q07866-10;Q07866-5;Q07866;Q07866-2;Q07866-8;G5E9S8;F8W6L3;E7EVH7;H0YJT3;H0YJL0;H0YJU9 Q07866-6 KLC1 Kinesin light chain 1 1 ACKVDS(0.944)PT(0.045)VT(0.01)TTLK 115.68 0.017035 0 5790.9 10228 7797.8 8881 11590 7257.8 10013 7945.1 8332.2 8350 TRUE FALSE 6234.255756 9720.092393 8057.77476 8155.393891 11134.91836 7534.000665 8698.281072 8983.55185 9056.919695 8077.540184 0.771801268 1.20334807 0.997553039 1.009638294 1.378503618 0.932709772 1.076847762 1.112164303 1.121247247 1 12.97970031 -4.749128966 24.98180695 1.093857905 0.771800522 0.38863895 0.120636462 595.301545 1207985.304 0.028952786 0.489017219 1.78E-05 4.749128966 -0.322057384 ACLISLGYDVENDR ddPTM_A459_MK2206_30min_R1 1 ACLISLGYDVENDR 14 0 O43707;O43707-2;F5GXS2;O43707-3 O43707 ACTN4 Alpha-actinin-4 0 244.95 4.80E-19 14603000 1684.4 2005.4 1630.4 922.19 1404.9 1508.3 1774.4 1592.6 1278.2 1723.7 FALSE TRUE 1541.132935 1874.848096 1519.732991 993.2172336 1348.939858 1593.698643 1656.033014 1578.676066 1411.073464 1937.244969 0.795528165 0.967790922 0.784481578 0.512695735 0.696318679 0.822662424 0.854839238 0.814907816 0.728391859 1 10.91979068 -11.44067414 9.434019303 1.03754767 0.776074872 0.266460913 0.111843489 0.068331945 0.000595419 0.083777572 0.028960886 3.63E-12 11.44067414 -0.261472798 ACLISLGYDVENDR ddPTM_A459_MK2206_30min_R2 2 ACLISLGYDVENDR 14 0 O43707;O43707-2;F5GXS2;O43707-3 O43707 ACTN4 Alpha-actinin-4 0 ; 288.11 2.38E-65 19210900 55503 55428 57758 63681 46737 53376 50713 48609 49954 57508 FALSE TRUE 59752.35235 52675.52612 59683.62289 58478.05859 44901.87055 55407.26108 44054.32218 54962.3632 54298.90862 55631.51867 1.074073723 0.946864788 1.072838282 1.051167755 0.807130052 0.995968875 0.791895013 0.987971648 0.976045773 1 15.76361487 -6.213405269 24.99842758 0.922643343 1.032466954 0.32412803 0.07743202 471.6875101 245480.3779 0.021988397 0.028386832 6.12E-07 6.213405269 0.109823611 ACPEEPAAPS(ph)PEPR ddPTM_A459_MK2206_30min_R1 4 ACPEEPAAPSPEPR 14 0 O94819 O94819 KBTBD11 Kelch repeat and BTB domain-containing protein 11 1 ACPEEPAAPS(1)PEPR;ACPEEPAAPS(1)PEPR;ACPEEPAAPS(1)PEPR;ACPEEPAAPS(1)PEPR 225.21 1.15E-09 45161000 7558.8 7612.9 7755.7 7311.5 7610.8 6821.7 8305.4 7155.9 6147.8 6429.1 TRUE FALSE 6915.884367 7117.298826 7229.264693 7874.632997 7307.64572 7207.938759 7751.36192 7093.336721 6786.88581 7225.585445 0.957138272 0.985013447 1.000509197 1.089826292 1.011356903 0.99755775 1.072765934 0.981697161 0.939285247 1 12.81889877 -10.61631996 14.7321149 1.000002038 1.007181685 0 0.044205385 0 0 0.044523195 0.010798461 2.42E-11 10.61631996 0.007179647 ACPEEPAAPS(ph)PEPR ddPTM_A459_MK2206_30min_R2 3 ACPEEPAAPSPEPR 14 0 O94819 O94819 KBTBD11 Kelch repeat and BTB domain-containing protein 11 1 ACPEEPAAPS(1)PEPR;ACPEEPAAPS(1)PEPR;ACPEEPAAPS(1)PEPR 145.43 0.00051719 70128200 52298 71302 57070 79072 67992 74542 71319 53860 71518 60329 TRUE FALSE 56301.97509 67761.24636 58972.68532 72611.56466 65322.29245 77378.74804 61954.72963 60899.68693 77738.50637 58360.46967 0.96472793 1.161081238 1.010490245 1.244190889 1.11929004 1.325876034 1.061587235 1.043509198 1.332040451 1 15.83270387 -3.810177108 1.049844037 1.15520627 5.91E-14 0.16466052 0.116983772 21.017421 4.036194325 0.034966954 43.88501385 0.000154819 3.810177108 -1.15520627 ACPGPPPPS(ph)PEPLAR ddPTM_A459_MK2206_30min_R1 2 ACPGPPPPSPEPLAR 15 0 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 ACPGPPPPS(1)PEPLAR;ACPGPPPPS(1)PEPLAR 132.51 0.00061793 17275200 12775.5 11774.3 14302.2 12375.6 14808.5 14409.4 16121.1 14011.5 13401.3 11925.1 TRUE FALSE 11688.87664 11007.79093 13331.40651 13328.77086 14218.64609 15225.24778 15045.69083 13888.99893 14794.41309 13402.47142 0.872143374 0.821325455 0.994697627 0.994500972 1.060897326 1.136003003 1.122605702 1.036301328 1.10385709 1 13.71021144 -5.569816222 1.283175537 1.083115096 0.831768366 0.78064842 0.045804033 0.22542067 0.685028821 0.01506714 0.05119106 2.69E-06 5.569816222 -0.25134673 ACPGPPPPS(ph)PEPLAR ddPTM_A459_MK2206_30min_R2 1 ACPGPPPPSPEPLAR 15 0 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 ACPGPPPPS(1)PEPLAR 139.64 0.00039276 18766000 72625 83430 87482 102460 102090 103280 115690 81136 108290 98975 TRUE FALSE 78185.22584 79286.98752 90398.60622 94088.69025 98081.43364 107210.3928 100499.764 91740.75378 117708.8685 95745.45386 0.816594655 0.828101851 0.944155598 0.982696164 1.024397814 1.119743951 1.049655728 0.95817347 1.229393812 1 16.54691637 -5.541105348 1.007590559 1.068069495 0.784241568 0.653234692 0.069214726 0.457365315 0.775424583 0.0249136 0.108178783 2.88E-06 5.541105348 -0.283827926 ACQS(ph)IYPLHDVFVR ddPTM_A459_MK2206_30min_R2 1 ACQSIYPLHDVFVR 14 0 D6RAT0;P61247;D6RG13;D6R9B6;D6RB09;H0Y9Y4 D6RAT0 RPS3A 40S ribosomal protein S3a 1 ACQS(1)IYPLHDVFVR 108.49 0.0032214 2076500 9476.1 10496 11726 13406 9688.2 10371 11804 8844.3 7765.1 9626.7 TRUE FALSE 10201.5975 9974.783903 12116.93899 12310.68692 9307.792589 10765.67567 10254.12062 10000.28038 8440.494362 9312.581567 1.095463962 1.071108353 1.301136414 1.321941379 0.999485752 1.156035584 1.101103979 1.073846205 0.906353872 1 13.18496544 -7.768344038 1.101997422 0.956584641 1.16860722 0.391762739 0.096128652 0.563635676 1.237593835 0.088488158 0.034980478 1.70E-08 7.768344038 0.212022579 ACQSIYPLHDVFVR ddPTM_A459_MK2206_30min_R1 2 ACQSIYPLHDVFVR 14 0 D6RAT0;P61247;D6RG13;D6R9B6;D6RB09;H0Y9Y4 D6RAT0 RPS3A 40S ribosomal protein S3a 0 ; 122.33 0.0025155 42085000 10319.8 9776.8 10121.8 9318.9 12515.1 11615.6 11483.2 10331.8 8701 8056.3 FALSE TRUE 9442.046819 9140.328543 9434.760417 10036.64329 12016.59707 12273.26523 10717.17668 10241.47016 9605.500087 9054.375266 1.042815936 1.00949301 1.042011198 1.108485456 1.327159159 1.355506578 1.183646178 1.131107322 1.060868343 1 13.14439939 -5.969672852 4.515253395 1.194460146 1.032471222 0.276717419 0.102218031 0.248235669 12.02277627 0.031637782 0.04661731 1.07E-06 5.969672852 -0.161988924 ACQSIYPLHDVFVR ddPTM_A459_MK2206_30min_R2 2 ACQSIYPLHDVFVR 14 0 D6RAT0;P61247;D6RG13;D6R9B6;D6RB09;H0Y9Y4 D6RAT0 RPS3A 40S ribosomal protein S3a 0 ; 114.69 0.0040831 15971000 75725 107451 86447 109066 103543 108411 114533 85490 98743 103483 FALSE TRUE 81522.56422 102115.1396 89329.09983 100154.9589 99477.38156 112536.6566 99494.67952 96663.83653 107331.4877 100106.3582 0.814359504 1.020066472 0.89234192 1.000485491 0.993716916 1.124170918 0.993889712 0.965611359 1.072174531 1 16.61117408 -3.425506602 0.63340109 1.023507547 5.17E-14 0.471281083 0.059440477 15.38088999 1.226036462 0.02586128 16.7968045 0.000375399 3.425506602 -1.023507547 ACTGLSGPGS(ph)GSKSPPATR ddPTM_A459_MK2206_30min_R2 1 ACTGLSGPGSGSKSPPATR 19 1 I3L2J0;I3L2I4 I3L2J0 CIC 1 ACTGLSGPGS(0.347)GS(0.347)KS(0.288)PPAT(0.017)R 54.355 0.033677 12964000 24396 45283 40064 53334 50086 53948 45746 36585 53288 35101 TRUE FALSE 26263.77652 43034.31207 41399.71376 48976.44159 48119.37198 56001.02894 39739.49525 41366.78512 57922.89392 33955.65724 0.773472777 1.26736796 1.219228757 1.442364706 1.417123857 1.649240023 1.170335033 1.218259002 1.70583928 1 15.05136434 -4.433825135 1.409472422 1.376691625 7.12E-17 0.414039819 0.204986381 2.768348792 2.63122898 0.056576289 6.843394944 3.68E-05 4.433825135 -1.376691625 ACTGLSGPGSGS(ph)KSPPATR ddPTM_A459_MK2206_30min_R1 1 ACTGLSGPGSGSKSPPATR 19 1 I3L2J0;I3L2I4 I3L2J0 CIC 1 ACTGLSGPGS(0.02)GS(0.77)KS(0.207)PPAT(0.004)R 95.344 0.000954 22881000 3242.9 3088.5 3571.5 3097 3613.1 2710.2 2657.2 3452.2 2065 1326.7 TRUE FALSE 2967.074326 2887.438089 3329.076531 3335.531477 3469.182576 2863.649182 2479.943036 3422.017779 2279.66414 1491.061612 1.989907259 1.936498174 2.232688779 2.237017873 2.326652734 1.920543832 1.66320628 2.295021045 1.528886614 1 10.54212416 -8.814559322 0.831425442 0.986711079 2.103484957 0.709569748 0.213826008 0.598153927 0.792484924 0.216291135 0.074554675 1.53E-09 8.814559322 1.116773878 ACTGLSGPGSGSKS(ph)PPATR ddPTM_A459_MK2206_30min_R1 1 ACTGLSGPGSGSKSPPATR 19 1 I3L2J0;I3L2I4 I3L2J0 CIC 1 ACTGLSGPGS(0.004)GS(0.096)KS(0.867)PPAT(0.033)R 91.378 0.0013668 26698000 3314.7 2800.1 3105.1 3058.7 3437.1 2621.4 2604.5 3141 2202.3 1190 TRUE FALSE 3032.767359 2617.812981 2894.334463 3294.281604 3300.193029 2769.821403 2430.758557 3113.538568 2431.236966 1337.426184 2.267614763 1.957351376 2.16410782 2.463150223 2.467570224 2.071008805 1.817489882 2.328007785 1.81784759 1 10.38524355 -9.282878371 0.63810419 0.953982343 2.223045518 0.763176041 0.200653654 1.44030703 0.808819744 0.363686502 0.084812398 5.21E-10 9.282878371 1.269063175 ACTGLSGPGSGSKS(ph)PPATR ddPTM_A459_MK2206_30min_R2 1 ACTGLSGPGSGSKSPPATR 19 1 I3L2J0;I3L2I4 I3L2J0 CIC 1 ACTGLSGPGS(0.03)GS(0.061)KS(0.761)PPAT(0.148)R 61.985 0.01847 9969800 22888 50159 46829 52035 52968 49512 47635 34462 49770 33573 TRUE FALSE 24640.32288 47668.177 48390.25549 47783.57405 50888.21018 51396.21385 41380.46728 38966.30173 54098.90464 32477.51576 0.758688659 1.467728546 1.489961728 1.471281683 1.566875082 1.582516786 1.274126617 1.199793174 1.665734074 1 14.98715366 -11.1292827 3.063877614 0.975328679 1.396541255 0.17796753 0.248192973 153459129.9 193282402.5 31037790.8 0.060327689 7.43E-12 11.1292827 0.421212576 ACTLTVFPPEENPGS(ph)PSR ddPTM_A459_MK2206_30min_R1 2 ACTLTVFPPEENPGSPSR 18 0 Q9P2J3 Q9P2J3 KLHL9 Kelch-like protein 9 1 ACTLTVFPPEENPGS(0.986)PS(0.014)R;ACTLT(0.001)VFPPEENPGS(0.984)PS(0.015)R 216.53 3.60E-14 20919700 4866 4784.1 4914.2 4096.88 4553.5 4182.8 4965.8 4428.91 3775.04 4070.48 TRUE FALSE 4452.121148 4472.65422 4580.637796 4412.422407 4372.124453 4419.626521 4634.540543 4390.188507 4167.468917 4574.761793 0.973191906 0.977680243 1.001284439 0.964514134 0.955705379 0.966088885 1.013067074 0.959654012 0.910969599 1 12.15948091 -5.821050681 24.99990422 0.966854659 0.983415485 0.078822784 0.026450478 207.4651006 87005.42712 0.007674177 0.011382649 1.51E-06 5.821050681 0.016560826 ACTLTVFPPEENPGS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 ACTLTVFPPEENPGSPSR 18 0 Q9P2J3 Q9P2J3 KLHL9 Kelch-like protein 9 1 ACTLTVFPPEENPGS(0.992)PS(0.008)R;ACTLTVFPPEENPGS(0.661)PS(0.339)R 143.69 0.00029105 11473900 28750.6 36046 26480.8 29848 31093 29939.8 29580.5 24375 24992 29608 TRUE FALSE 30951.76804 34256.00806 27363.65666 27409.32292 29872.13259 31079.18007 25696.54482 27560.89619 27165.75898 28641.89338 1.080646717 1.196010599 0.95537178 0.956966167 1.04295244 1.085095166 0.897166415 0.96225818 0.948462402 1 14.80583925 -5.268509073 24.89204079 0.98175914 1.13832866 0.557903778 0.056005336 348.7268725 1227853.99 0.01523472 0.032810459 5.39E-06 5.268509073 0.15656952 ACWAWGPS(ph)SPKPGEAQNGR ddPTM_A459_MK2206_30min_R2 1 ACWAWGPSSPKPGEAQNGR 19 1 Q16584;Q16584-2 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 ACWAWGPS(0.5)S(0.5)PKPGEAQNGR 84.113 0.0022773 7299100 18837 19842 20392 18486 16502 15637 23834 14966 13397 20906 TRUE FALSE 20279.1752 18856.67513 21071.8591 16975.63467 15854.04856 16232.07699 20704.56717 16922.10759 14562.24684 20223.83893 1.00273619 0.932398404 1.041931711 0.839387355 0.78392874 0.802620959 1.023770375 0.836740623 0.720053541 1 14.30376926 -5.772801378 24.99565148 0.852773543 0.986359733 0.312888711 0.090823759 257.2548732 565943.8517 0.025829642 0.03869436 1.69E-06 5.772801378 0.13358619 ACWAWGPSS(ph)PKPGEAQNGR ddPTM_A459_MK2206_30min_R2 1 ACWAWGPSSPKPGEAQNGR 19 1 Q16584;Q16584-2 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 ACWAWGPS(0.166)S(0.834)PKPGEAQNGR 82.36 0.0028496 5963700 16786 17991 22843 21169 19200 18079 20616 19783 15398 22487 TRUE FALSE 18071.14907 17097.5931 23604.57422 19439.42498 18446.11153 18767.00901 17909.09444 22368.70603 16737.29021 21753.25103 0.830733256 0.785978752 1.085105587 0.893633092 0.847970333 0.862722036 0.823283582 1.028292552 0.769415578 1 14.40894341 -11.75351974 2.264481184 1.381134419 0.885540892 0.119795588 0.096166209 14935979.92 2613747.809 29163051.2 0.025020086 1.76E-12 11.75351974 -0.495593528 ADAASSLT(ph)VDVTPPTAK ddPTM_A459_MK2206_30min_R1 2 ADAASSLTVDVTPPTAK 17 0 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 ADAAS(0.015)S(0.002)LT(0.974)VDVT(0.008)PPTAK;ADAAS(0.008)S(0.034)LT(0.914)VDVT(0.043)PPT(0.001)AK 213.94 2.91E-09 30550000 9255.7 9542 9085 7312.5 8336.9 7276.8 8467.1 8128.3 7604.7 6883.5 TRUE FALSE 8468.454111 8920.814066 8468.335512 7875.710017 8004.823619 7688.806128 7902.275208 8057.23513 8395.235779 7736.279948 1.094641632 1.153114174 1.094626302 1.018022883 1.034712248 0.993863482 1.021456729 1.041487018 1.085177351 1 12.91742429 -5.632681067 4.063328253 1.02821954 1.124098174 0.685243117 0.027203662 0.120265282 3.607367796 0.007636634 0.013861865 2.33E-06 5.632681067 0.095878634 ADAASSLT(ph)VDVTPPTAK ddPTM_A459_MK2206_30min_R2 2 ADAASSLTVDVTPPTAK 17 0 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 ADAAS(0.019)S(0.01)LT(0.903)VDVT(0.062)PPT(0.006)AK;ADAAS(0.281)S(0.02)LT(0.644)VDVT(0.046)PPT(0.008)AK 189.59 1.69E-07 78061000 306893 326918 290113 322990 319417 271868 321303 277502 264339 340740 TRUE FALSE 330388.964 310683.7275 299785.2226 296600.6838 306875.0836 282214.1272 279115.5301 313772.4642 287330.7284 329621.6817 1.002327767 0.942546394 0.909482717 0.899821523 0.930991803 0.856175861 0.846775396 0.951916945 0.871698509 1 18.33045162 -4.685109707 1.414168883 0.901901582 1.061680413 0.297941048 0.043617057 1.75764373 2.714342572 0.012087038 0.427125269 2.06E-05 4.685109707 0.159778831 ADAASSLTVDVT(ph)PPTAK ddPTM_A459_MK2206_30min_R2 2 ADAASSLTVDVTPPTAK 17 0 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 ADAAS(0.001)S(0.002)LT(0.264)VDVT(0.523)PPT(0.211)AK;ADAASSLT(0.006)VDVT(0.991)PPT(0.002)AK 193.31 2.01E-07 15935200 81819 104367 91137 101425 104705 91632 115224 85540 95900 90546 TRUE FALSE 88083.12555 99184.28654 94175.46209 93138.25306 100593.7556 95119.11997 100094.9504 96720.3717 104241.2087 87591.49144 1.005612807 1.132350699 1.075166783 1.063325347 1.148442091 1.08594018 1.142747415 1.104221085 1.190083728 1 16.41850311 -6.243479593 24.65811263 1.11736061 1.074063169 0.120591402 0.054801471 1434.387279 1969358.767 0.015109037 0.019461989 5.71E-07 6.243479593 -0.043297442 ADAASSLTVDVTPPT(ph)AK ddPTM_A459_MK2206_30min_R1 1 ADAASSLTVDVTPPTAK 17 0 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 ADAASSLT(0.001)VDVT(0.127)PPT(0.871)AK 275.74 4.54E-52 33609000 5970.1 6000.7 5435.6 4604.6 5743.6 4896.9 5165.9 5355 4975 4482.1 TRUE FALSE 5462.311645 5610.053339 5066.646616 4959.24709 5514.82025 5174.158246 4821.292237 5308.1818 5492.169053 5037.376386 1.084356464 1.11368556 1.00581061 0.984490082 1.094780264 1.027153393 0.957103831 1.053759218 1.090283638 1 12.29845682 -5.258245746 24.9178818 1.027051067 1.099021016 0.322193292 0.041971428 313.1906103 2443600.011 0.01114062 0.027208403 5.52E-06 5.258245746 0.071969949 ADADPSPTS(ph)PPTAR ddPTM_A459_MK2206_30min_R2 1 ADADPSPTSPPTAR 14 0 Q9NWZ5;Q9NWZ5-3;Q9NWZ5-2 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 1 ADADPS(0.005)PT(0.033)S(0.96)PPT(0.003)AR 166.79 0.0002264 15570000 40794 57148 46974 55679 56195 49300 63091 46228 49773 52051 TRUE FALSE 43917.22001 54310.11342 48540.08972 51129.84759 53988.50194 51176.14605 54807.07591 52270.15832 54102.16557 50352.58013 0.872194034 1.078596435 0.964004021 1.015436497 1.072209245 1.016355982 1.088466088 1.038083018 1.0744666 1 15.61977809 -4.752940688 24.9995734 1.038669017 0.872193723 0.630835323 0.038194881 208.9141112 614490.7205 0.009372823 0.106098065 1.77E-05 4.752940688 -0.166475294 ADAEGESDLENSR ddPTM_A459_MK2206_30min_R1 1 ADAEGESDLENSR 13 0 Q9Y490 Q9Y490 TLN1 Talin-1 0 174.57 7.60E-09 0 1113.4 926.55 2364.1 929.44 1232.2 1085.7 1136.9 1051.5 974.09 874.71 FALSE TRUE 1018.699483 866.2314266 2203.631479 1001.02563 1183.118865 1147.171396 1061.059475 1042.306846 1075.350141 983.0756785 1.036237093 0.881144194 2.241568505 1.018258972 1.203487067 1.166920737 1.079326341 1.060250873 1.093863031 1 9.941158671 ADALQAGASQFETS(ph)AAK ddPTM_A459_MK2206_30min_R2 1 ADALQAGASQFETSAAK 17 0 Q15836;K7ENK9;K7EKX0;J3QRU4;F8WCA0;L7N2F9;P63027 Q15836 VAMP3;VAMP2 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2 1 ADALQAGASQFET(0.194)S(0.806)AAK 180.78 7.62E-08 3002400 31697 20828 17542 20516 21782 20345 28221 16319 17965 23453 TRUE FALSE 34123.74669 19793.71181 18126.84152 18839.77717 20926.72923 21119.24323 24515.5488 18451.94933 19527.56323 22687.73053 1.504061706 0.872441242 0.798971122 0.830394964 0.922380897 0.930866276 1.080564174 0.813300797 0.860710295 1 14.46962468 -4.760030451 24.99999173 0.897042702 1.504062444 0.825664378 0.083104971 14.63732635 259631.7133 0.02169205 0.132118286 1.74E-05 4.760030451 0.607019742 ADAPDAGAQS(ph)DSELPSYHQNDVSLDR ddPTM_A459_MK2206_30min_R1 4 ADAPDAGAQSDSELPSYHQNDVSLDR 26 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 ADAPDAGAQS(1)DSELPSYHQNDVSLDR;ADAPDAGAQS(0.999)DS(0.001)ELPSYHQNDVSLDR;ADAPDAGAQS(0.999)DS(0.001)ELPSYHQNDVSLDR;ADAPDAGAQS(0.999)DS(0.001)ELPSYHQNDVSLDR 193.29 3.40E-28 258081000 16586.1 7661.2 11039.4 7214.5 20452.1 19899.7 20127 14752.1 8320 8904.6 TRUE FALSE 15175.3651 7162.454488 10290.07629 7770.16204 19637.44955 21026.40382 18784.36455 14623.12395 9184.893773 10007.76907 1.51635844 0.715689424 1.028208805 0.776413003 1.962220491 2.101008093 1.876978217 1.461177195 0.91777635 1 13.28883278 -6.254209514 24.98856954 1.61983223 0.989564794 0.284374877 0.414315867 678.516388 2345153.085 0.12785712 0.16163529 5.57E-07 6.254209514 -0.630267436 ADAPDAGAQS(ph)DSELPSYHQNDVSLDR ddPTM_A459_MK2206_30min_R2 3 ADAPDAGAQSDSELPSYHQNDVSLDR 26 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 ADAPDAGAQS(0.956)DS(0.044)ELPSYHQNDVSLDR;ADAPDAGAQS(0.674)DS(0.326)ELPSYHQNDVSLDR;ADAPDAGAQS(0.97)DS(0.03)ELPSYHQNDVSLDR 163.75 9.13E-15 242720000 68963.4 158122.7 101835.4 200771.6 200014.5 231585 203924 124361.9 190972.5 117621.6 TRUE FALSE 74243.29093 150270.5566 105230.5414 184367.918 192160.9257 240398.1295 177148.5338 140616.4273 207582.9429 113783.6168 0.652495438 1.320669538 0.924830343 1.620337999 1.688827716 2.112765758 1.556889637 1.235823146 1.824365833 1 16.79593332 -5.765407456 24.90098842 1.612972431 1.001465487 0.423219427 0.324184399 88.49491365 555339.9579 0.089239266 0.13808307 1.72E-06 5.765407456 -0.611506944 ADDADEFGYS(ph)R ddPTM_A459_MK2206_30min_R2 1 ADDADEFGYSR 11 0 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 1 ADDADEFGYS(1)R 110.8 0.0086129 8725800 21020 25384 25113 25435 25475 31003 26725 17898 20840 18982 TRUE FALSE 22629.30736 24123.46747 25950.25489 23356.87914 24474.7235 32182.84089 23215.9754 20237.33005 22652.62553 18362.61889 1.232357296 1.313726959 1.413210993 1.271979736 1.332855822 1.752628047 1.264306335 1.102093888 1.233627167 1 14.16448421 -7.5235748 19.05582978 1.137353936 1.387457511 0.416412322 0.144637272 1.319565804 35977.66501 0.068946274 0.040634889 3.00E-08 7.5235748 0.250103575 ADDADEFGYSR ddPTM_A459_MK2206_30min_R1 1 ADDADEFGYSR 11 0 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 0 166.66 0.008063 16191000 2654.3 2702.9 2645.8 2540.6 2708.7 1943.2 2561.9 2824.2 2114.3 1552.7 FALSE TRUE 2428.537847 2526.940719 2466.210468 2736.277452 2600.806743 2053.222305 2391.000325 2799.508317 2334.089051 1745.060198 1.391664224 1.448053609 1.413252374 1.568013215 1.490382249 1.176591104 1.370153493 1.604247418 1.337540707 1 10.76906109 ADDADEFGYSR ddPTM_A459_MK2206_30min_R2 1 ADDADEFGYSR 11 0 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 0 143.4 0.011671 19281000 25876 30573 21577 33184 27260 29914 28750 28000 31784 23553 FALSE TRUE 27857.08646 29054.78928 22296.36641 30472.76105 26189.63543 31052.39823 24975.09047 31659.69614 34548.51487 22784.46754 1.222634955 1.275201592 0.978577462 1.337435733 1.149451282 1.362875748 1.096145452 1.389529779 1.516318729 1 14.47576304 -6.781750396 1.08995659 1.296331232 1.186918577 0.030286592 0.164532114 1.518257809 3.834026547 0.08800413 0.077983099 1.65E-07 6.781750396 -0.109412655 ADDGRPFPQVIK ddPTM_A459_MK2206_30min_R2 1 ADDGRPFPQVIK 12 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8;H3BU78 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 144.17 0.002155 34203000 145450 179410 188630 179220 173200 190210 184850 148620 185930 176890 FALSE TRUE 156585.7638 170500.7603 194918.8301 164577.1527 166399.2977 197448.5748 160578.973 168045.1443 202101.8553 171118.0938 0.915074265 0.996392354 1.139089536 0.961775281 0.972423746 1.153873155 0.938410249 0.982041937 1.181066542 1 17.38463279 -4.864498674 4.092499918 1.037216951 0.914093442 0.174429101 0.083078718 0.384459582 10.59127176 0.02035991 0.112571384 1.37E-05 4.864498674 -0.123123509 ADDTDSQSWRS(ph)PLK ddPTM_A459_MK2206_30min_R1 1 ADDTDSQSWRSPLK 14 1 O75369-8 O75369-8 FLNB Filamin-B 1 ADDT(0.019)DS(0.011)QS(0.011)WRS(0.959)PLK 96.163 0.0065935 62318000 5714.7 5586.3 4979.2 5136.9 4938.7 3530.8 3944.9 4922 3016.2 1804.4 TRUE FALSE 5228.634756 5222.630855 4641.225777 5532.544928 4741.981121 3730.710845 3681.742919 4878.967473 3329.744784 2027.942695 2.578295121 2.575334534 2.288637539 2.728156443 2.338321065 1.839652992 1.815506389 2.405870484 1.641932384 1 10.98580117 -9.600091458 0.154054268 2.75E-13 3.040557808 0.779287321 0.239519509 7.585802504 0.38573641 5.432323009 1.862021776 2.51E-10 9.600091458 3.040557808 ADDTDSQSWRS(ph)PLK ddPTM_A459_MK2206_30min_R2 1 ADDTDSQSWRSPLK 14 1 O75369-8 O75369-8 FLNB Filamin-B 1 ADDT(0.015)DS(0.012)QS(0.005)WRS(0.968)PLK 84.195 0.014422 158040000 410750 1008200 701900 727270 985220 810280 754880 609000 795840 618210 TRUE FALSE 442197.3358 958134.2541 725300.9957 667849.7146 946535.3125 841115.7732 655763.3492 688598.391 865060.7247 598037.8583 0.739413617 1.602129766 1.212801139 1.116734844 1.582734771 1.406459075 1.09652481 1.151429431 1.446498265 1 19.18987729 -10.57858535 3.997145201 0.999955719 1.271558558 0.090454312 0.247098945 40527146.1 77168526.87 24294.72892 0.058935132 2.64E-11 10.57858535 0.271602839 ADEASELACPT(ph)PK ddPTM_A459_MK2206_30min_R1 5 ADEASELACPTPK 13 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 ADEASELACPT(1)PK;ADEASELACPT(1)PK;ADEASELACPT(1)PK;ADEAS(0.002)ELACPT(0.998)PK;ADEASELACPT(1)PK 141.85 0.0018864 378502000 20773.7 22598.1 23034.6 17688.3 13891.4 12481.5 15696.1 15779.1 19517.4 20424.7 TRUE FALSE 19006.78773 21126.95958 21471.07553 19050.65593 13338.07612 13188.19174 14649.04181 15641.14499 21546.30357 22955.06603 0.827999697 0.920361525 0.935352375 0.829910744 0.581051525 0.574522056 0.638161606 0.681380963 0.938629562 1 14.48652496 -6.031799317 8.631710595 0.706481749 0.894921181 0.202241957 0.136107765 0.41826101 107.2927112 0.04002221 0.052830418 9.29E-07 6.031799317 0.188439432 ADEASELACPT(ph)PK ddPTM_A459_MK2206_30min_R2 3 ADEASELACPTPK 13 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 ADEASELACPT(1)PK;ADEASELACPT(1)PK;ADEASELACPT(1)PK 147.56 0.001333 394117000 1404120 1472380 1401060 1256100 1279490 812917 1306510 880644 816988 1276500 TRUE FALSE 1511620.507 1399263.75 1447770.641 1153472.612 1229250.794 843853.1261 1134963.668 995747.1945 888048.1395 1234847.91 1.224134968 1.133146632 1.172428305 0.934100955 0.995467364 0.68336604 0.91911211 0.806372337 0.719155884 1 20.23590193 -5.966723071 1.25706357 0.82392598 1.198395309 0.681125973 0.099133275 0.251051005 0.805232091 0.034702825 0.068293453 1.08E-06 5.966723071 0.374469329 ADEDPIMGFHQMFLLK ddPTM_A459_MK2206_30min_R1 2 ADEDPIMGFHQMFLLK 16 0 H3BRV9;P61970 H3BRV9 NUTF2 Nuclear transport factor 2 0 ; 138.55 0.00056819 7532400 5209.8 5868.7 5360.9 4818.6 4915.7 4138.9 4842.6 4972.9 3766.1 3736.6 FALSE TRUE 4766.679152 5486.646563 4997.017044 5189.729407 4719.89726 4373.240941 4519.55899 4929.42246 4157.599572 4199.518218 1.13505381 1.306494288 1.189902457 1.235791616 1.123913986 1.041367298 1.076208926 1.173806662 0.990018225 1 12.03600811 -6.43101885 3.382829596 1.068785118 1.221252166 0.590276214 0.062415445 0.180647118 3.913818085 0.019733636 0.022173861 3.71E-07 6.43101885 0.152467048 ADEGISFR ddPTM_A459_MK2206_30min_R1 4 ADEGISFR 8 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ;;; 161.9 0.0053736 226814000 24310.6 24343.5 24677.4 21689.3 26822.7 22511.6 26028.1 23454.3 20126.9 17994.2 FALSE TRUE 22242.85581 22758.73373 23002.36684 23359.81364 25754.29506 23786.18734 24291.81294 23249.24153 22219.16328 20223.45735 1.099854265 1.125363153 1.137410209 1.15508507 1.27348626 1.176168196 1.201170133 1.149617552 1.098682728 1 14.30374204 -8.567763605 1.951051224 1.000715181 1.168328218 0.566976253 0.044776086 0.302816757 2.61448024 0.047033058 0.013174359 2.71E-09 8.567763605 0.167613037 ADEGISFR ddPTM_A459_MK2206_30min_R2 3 ADEGISFR 8 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ;; 157.58 0.0074084 219924000 581200 697860 596740 702980 662560 731980 710820 538535 654160 629780 FALSE TRUE 625697.1189 663205.2872 616635.0138 645544.2853 636544.5653 759836.0118 617488.4802 608923.3736 711057.6543 609230.3302 1.027028839 1.088595322 1.012154161 1.059606282 1.044834004 1.247206474 1.013555054 0.999496157 1.16714093 1 19.21662824 -4.745727602 23.24821739 1.071081786 1.027028551 0.027969546 0.076376395 1721.083728 2546282.266 0.018747268 0.413465159 1.80E-05 4.745727602 -0.044053234 ADEGLPANESFLNGNLAGASLS(ph)PLHTK ddPTM_A459_MK2206_30min_R2 2 ADEGLPANESFLNGNLAGASLSPLHTK 27 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 ADEGLPANESFLNGNLAGAS(0.151)LS(0.837)PLHT(0.012)K;ADEGLPANESFLNGNLAGAS(0.146)LS(0.822)PLHT(0.032)K 151.07 3.46E-14 16106900 101367 137663 113098 135323 112919 97935 109798 89364 80782 97788 TRUE FALSE 109127.7355 130826.8556 116868.6309 124266.678 108485.2327 101661.9851 95381.39071 101044.1816 87808.27234 94597.18557 1.153604463 1.382988879 1.235434545 1.31364033 1.146812477 1.074682978 1.008289942 1.068152092 0.928233454 1 16.52950964 -6.64802095 1.667668485 1.006280464 1.279351585 0.777149309 0.06489514 0.15802482 0.906127899 0.024917616 0.024785901 2.25E-07 6.64802095 0.273071121 ADEHVIDQGDDGDNFYVIER ddPTM_A459_MK2206_30min_R1 3 ADEHVIDQGDDGDNFYVIER 20 0 P13861;P13861-2;H7C1L0 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 0 ;; 202.81 8.67E-16 11721300 8604.95 7817.4 9028.9 7854.3 9491.2 8527.4 9300 8711.28 7289.97 6955.02 FALSE TRUE 7873.053816 7308.485839 8416.043424 8459.239547 9113.145406 9010.214019 8679.613969 8635.118197 8047.788469 7816.660385 1.007214517 0.934988279 1.076680194 1.082206355 1.165861756 1.152693551 1.110399268 1.10470684 1.029568649 1 12.93233664 -5.386731072 4.463122485 1.101465754 0.971922287 0.465120601 0.050477 0.173174704 5.433948112 0.013472455 0.029517715 4.10E-06 5.386731072 -0.129543467 ADEHVIDQGDDGDNFYVIER ddPTM_A459_MK2206_30min_R2 3 ADEHVIDQGDDGDNFYVIER 20 0 P13861;P13861-2;H7C1L0 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 0 ;; 157.42 2.06E-06 9126900 40370.2 56845 45563 54172 53322 58511 55700 39475.2 46011 46851 FALSE TRUE 43460.97355 54022.15996 47082.04768 49745.97431 51228.31036 60737.67711 48386.52309 44634.74418 50012.95361 45322.25571 0.95893227 1.191956559 1.038828429 1.097605879 1.13031246 1.340129174 1.067610655 0.984830598 1.103496568 1 15.46793205 -10.76794504 6.100816977 0.999997381 1.10565828 0.079833527 0.102539279 3.73E-06 4.62E-07 0.10147219 0.024610011 1.71E-11 10.76794504 0.1056609 ADFDNTVAIHPTSSEELVTLR ddPTM_A459_MK2206_30min_R1 3 ADFDNTVAIHPTSSEELVTLR 21 0 P00390-5;P00390-4;P00390-2;P00390-3;P00390 P00390-5 GSR "Glutathione reductase, mitochondrial" 0 ;; 197.6 2.14E-16 15777200 3800.82 2657.84 3302.78 2820.1 4684.39 4992.24 4528.74 3760.25 2916.05 2633.64 FALSE TRUE 3477.5403 2484.814133 3078.596496 3037.304591 4497.800827 5274.896315 4226.636018 3727.374531 3219.183833 2959.915206 1.174878352 0.839488283 1.040096179 1.026145811 1.519570837 1.782110617 1.42795848 1.259284226 1.087593261 1 11.53134013 -6.244720788 22.25299533 1.384945224 1.008671953 0.334741714 0.220827255 213.3577532 283984.271 0.068711648 0.088336469 5.69E-07 6.244720788 -0.376273271 ADFDNTVAIHPTSSEELVTLR ddPTM_A459_MK2206_30min_R2 2 ADFDNTVAIHPTSSEELVTLR 21 0 P00390-5;P00390-4;P00390-2;P00390-3;P00390 P00390-5 GSR "Glutathione reductase, mitochondrial" 0 ; 159.72 1.61E-07 6061100 19101.3 29367 25474.9 29708 35125 36190 32708 26844.5 33262 25119 FALSE TRUE 20563.71021 27908.67748 26324.22045 27280.76137 33745.81601 37567.23581 28413.40031 30353.16832 36155.06864 24299.36909 0.846265191 1.148535066 1.08332938 1.122694226 1.388752765 1.546016922 1.169306092 1.249134009 1.487901538 1 14.56863124 -6.084938086 3.619016415 1.323572333 1.043574846 0.376593697 0.163495952 0.256394742 6.328072205 0.048799539 0.066593681 8.22E-07 6.084938086 -0.279997486 ADFTVVAGDEGSSTTGGSS(ph)EENKGPSGSAVSR ddPTM_A459_MK2206_30min_R2 1 ADFTVVAGDEGSSTTGGSSEENKGPSGSAVSR 32 1 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 ADFTVVAGDEGS(0.04)S(0.04)T(0.04)T(0.068)GGS(0.187)S(0.611)EENKGPS(0.01)GS(0.002)AVSR 59.732 0.00058881 6050400 13927 12524 10862 10496 14344 12177 18007 9363.3 8229.4 17151 TRUE FALSE 14993.26183 11902.07637 11224.13366 9638.443225 13780.78249 12640.40427 15642.65927 10587.11546 8945.178337 16591.36427 0.90367866 0.717365744 0.676504564 0.580931325 0.830599718 0.761866478 0.942819349 0.63811 0.539146642 1 14.0181449 ADGAPSAAPPDGLLAS(ph)PDLGLLK ddPTM_A459_MK2206_30min_R1 1 ADGAPSAAPPDGLLASPDLGLLK 23 0 P17535 P17535 JUND Transcription factor jun-D 1 ADGAPSAAPPDGLLAS(1)PDLGLLK 98.133 0.00047362 0 2033.6 1480.4 2011.6 1586.1 1736.8 1505.9 1876 1363.4 1549.4 1651.9 TRUE FALSE 1860.631641 1384.025691 1875.058197 1708.261697 1667.619578 1591.162757 1750.855463 1351.479938 1710.465675 1856.549843 1.002198593 0.745482647 1.00996922 0.920127032 0.898235824 0.857053616 0.943069463 0.727952413 0.921314168 1 10.85840833 -6.547512644 6.489750184 0.876204076 0.913033516 0.009524583 0.094683171 0.741466131 109.9141667 0.029916509 0.030427932 2.83E-07 6.547512644 0.036829439 ADGATS(ph)DDLDLHDDR ddPTM_A459_MK2206_30min_R2 2 ADGATSDDLDLHDDR 15 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ADGAT(0.179)S(0.821)DDLDLHDDR;ADGAT(0.416)S(0.584)DDLDLHDDR 170.16 3.60E-05 45861000 81984 79675 80024 104331 91716 80456 106197 80835 78036 97192 TRUE FALSE 88260.75807 75718.45536 82691.96022 95806.82356 88114.769 83517.80946 92253.20633 91400.41205 84823.43022 94020.633 0.938738182 0.805338711 0.879508652 1.018997857 0.937185447 0.888292354 0.981201715 0.972131426 0.902178889 1 16.52068977 -5.598127151 9.400020792 0.953171365 0.864681786 0.373386139 0.048728142 0.305213432 35.20473286 0.012853538 0.022292291 2.52E-06 5.598127151 -0.088489579 ADGATSDDLDLHDDR ddPTM_A459_MK2206_30min_R1 1 ADGATSDDLDLHDDR 15 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 0 162.7 0.00015387 23652000 3695.8 4063 3419.3 2523.5 3451.8 3422.4 3781.3 2903.1 3249 3336.5 FALSE TRUE 3381.452803 3798.497962 3187.207443 2717.860407 3314.307497 3616.17333 3529.056376 2877.718503 3586.745177 3749.850809 0.901756623 1.01297309 0.8499558 0.724791611 0.883850496 0.964351254 0.941119142 0.767422132 0.956503434 1 11.87261748 -6.537935517 24.78263259 0.913607277 0.871250143 0.071285214 0.087707083 839.8283769 1382301.894 0.030948553 0.030960307 2.90E-07 6.537935517 -0.042357134 ADGATSDDLDLHDDR ddPTM_A459_MK2206_30min_R2 2 ADGATSDDLDLHDDR 15 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 0 ; 205.28 5.29E-06 50782000 239880 276660 278920 307200 269160 293260 272330 230685 253450 238738 FALSE TRUE 258245.3972 262921.4667 288219.0536 282100.7773 258591.426 304420.2148 236572.7439 260836.3216 275494.6229 230947.9986 1.118197165 1.138444448 1.247982469 1.221490461 1.119695462 1.318133158 1.024355029 1.129415813 1.192885951 1 17.81720852 -10.0908831 0.384919326 0.950083142 1.183153608 0.297839093 0.077519183 11.60453542 1.60749194 0.817389891 0.055468876 8.11E-11 10.0908831 0.233070466 ADGGTGDSS(ph)PSPGSSLPSPLSDPR ddPTM_A459_MK2206_30min_R1 1 ADGGTGDSSPSPGSSLPSPLSDPR 24 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 ADGGTGDS(0.026)S(0.966)PS(0.006)PGS(0.001)SLPSPLSDPR 172.83 3.00E-16 7179300 989.74 969.91 1021.7 840.36 1061 912.9 819.16 806.68 738.09 895.58 TRUE FALSE 905.5574157 906.7686827 952.3498506 905.0846728 1018.738123 964.5876091 764.515331 799.6272818 814.8170968 1006.531212 0.899681406 0.900884813 0.946170213 0.899211731 1.012127703 0.958328562 0.75955452 0.794438635 0.809529886 1 9.975176194 -7.247587157 24.85935942 0.823750645 0.936709447 0.306447106 0.068228859 742.3230419 1332183.282 0.025362642 0.019536589 5.65E-08 7.247587157 0.112958802 ADGGTGDSS(ph)PSPGSSLPSPLSDPR ddPTM_A459_MK2206_30min_R2 2 ADGGTGDSSPSPGSSLPSPLSDPR 24 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 ADGGTGDS(0.105)S(0.884)PS(0.009)PGS(0.002)SLPSPLSDPR;ADGGT(0.025)GDS(0.189)S(0.62)PS(0.082)PGS(0.082)S(0.003)LPSPLSDPR 193.85 7.64E-27 6299700 46985 57782 49569.5 56822 60773 54131 60332 45099.3 53695 48760.2 TRUE FALSE 50582.20773 54912.6299 51222.12239 52179.46084 58386.74666 56190.99314 52410.33593 50993.93336 58365.29404 47169.15867 1.072357641 1.164163862 1.08592402 1.106219876 1.237816156 1.191265537 1.111114495 1.081086345 1.237361354 1 15.52555625 -1.57189346 20.44066945 1.134431059 0.005666965 0 0.073389553 0 0 0.016168314 0 0.026798257 1.57189346 -1.128764094 ADGGTGDSSPS(ph)PGSSLPSPLSDPR ddPTM_A459_MK2206_30min_R2 1 ADGGTGDSSPSPGSSLPSPLSDPR 24 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 ADGGTGDS(0.059)S(0.357)PS(0.564)PGS(0.02)SLPSPLSDPR 147.17 1.77E-09 6648500 54155 54368 49866 55797 56772 54645 57677 47365 51101 45582 TRUE FALSE 58301.14844 51668.16418 51528.50755 51238.20661 54542.84602 56724.55377 50103.94062 53555.76813 55545.67261 44094.66307 1.322181515 1.171755505 1.168588304 1.16200472 1.236948924 1.286426742 1.13628129 1.214563496 1.259691508 1 15.42831643 -11.38384015 2.662147041 0.90904629 1.213291029 0.568613659 0.056749105 17862711.36 10315909.95 10257929 0.014888446 4.13E-12 11.38384015 0.304244739 ADGGTGDSSPSPGS(ph)SLPSPLSDPR ddPTM_A459_MK2206_30min_R2 1 ADGGTGDSSPSPGSSLPSPLSDPR 24 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 ADGGTGDS(0.004)S(0.007)PS(0.156)PGS(0.412)S(0.412)LPS(0.006)PLS(0.002)DPR 69.258 0.0017907 4646700 6585.3 8674.7 7538.2 9244.1 12433 9723.2 8049.8 6809.1 9182.5 10035 TRUE FALSE 7089.475631 8243.927012 7789.519826 8488.82746 11944.81795 10093.22319 6992.85159 7699.072749 9981.177252 9707.558772 0.730304683 0.849227618 0.802417993 0.874455428 1.230465685 1.03972826 0.720351198 0.793100812 1.028186127 1 13.24489282 -6.00373605 24.23502546 0.958799874 0.805995912 0.254885911 0.133711822 187.0137903 1213152.914 0.042241469 0.061089681 9.91E-07 6.00373605 -0.152803962 ADGGTGDSSPSPGSSLPS(ph)PLSDPR ddPTM_A459_MK2206_30min_R2 2 ADGGTGDSSPSPGSSLPSPLSDPR 24 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 ADGGTGDSSPS(0.002)PGS(0.013)S(0.013)LPS(0.947)PLS(0.025)DPR;ADGGTGDS(0.045)S(0.275)PS(0.027)PGS(0.07)S(0.135)LPS(0.382)PLS(0.066)DPR 119.62 5.39E-06 4364200 18344.9 21267.3 20288.3 23695 18866 21175 21252 19433.2 19875.4 23784 TRUE FALSE 19749.39965 20211.19681 20964.7018 21759.0427 18125.22605 21980.82946 18461.58687 21973.18596 21604.12637 23007.93003 0.858373597 0.878444814 0.911194609 0.945719266 0.787781692 0.955358845 0.802401035 0.955026634 0.938986095 1 14.48984357 -7.958543315 24.82217849 0.961997573 0.880490946 0.364960409 0.052879833 142.5222324 85334.89399 0.02721771 0.013074942 1.10E-08 7.958543315 -0.081506627 ADGYEPPVQES(ph)V ddPTM_A459_MK2206_30min_R1 1 ADGYEPPVQESV 12 0 D6RAT0;P61247;D6R9B6;H0Y9Y4 D6RAT0 RPS3A 40S ribosomal protein S3a 1 ADGYEPPVQES(1)V 101.6 0.012386 10077000 3932.8 4059.5 4554.2 4196.1 4372.3 3850 4014 3928.1 3598.2 3228.2 TRUE FALSE 3598.294708 3795.225812 4245.073593 4519.284349 4198.142033 4067.983673 3746.233384 3893.757036 3972.245766 3628.133788 0.99177564 1.046054538 1.17004329 1.245622299 1.157107835 1.121233094 1.032551059 1.073212087 1.094845449 1 11.82501194 -7.197198693 6.891974187 1.056361084 1.128242126 0.202469632 0.06876094 0.479448877 43.69788773 0.029593844 0.022803416 6.35E-08 7.197198693 0.071881042 ADGYEPPVQES(ph)V ddPTM_A459_MK2206_30min_R2 2 ADGYEPPVQESV 12 0 D6RAT0;P61247;D6R9B6;H0Y9Y4 D6RAT0 RPS3A 40S ribosomal protein S3a 1 ADGYEPPVQES(1)V;ADGYEPPVQES(1)V 162.31 0.00049023 16374200 85158 112460 89015 111685 113225 108855 119226 84986 92174 100762 TRUE FALSE 91677.76196 106875.3999 91982.71567 102559.9782 108779.2176 112997.5533 103571.483 96093.962 100191.1279 97474.14419 0.940534156 1.096448713 0.943662716 1.052176237 1.115980227 1.159256685 1.062553397 0.98584053 1.027873891 1 16.57273196 -2.809000148 17.89345745 1.043580488 0.466820925 0 0.06923408 0 0 0.016419779 0 0.001552386 2.809000148 -0.576759563 ADHGEPIGR ddPTM_A459_MK2206_30min_R1 2 ADHGEPIGR 9 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 111.46 0.014419 52274000 11183.1 11390 11100.9 9742.8 10301.8 9172.6 11897.4 12474.8 1993.76 7799.3 FALSE TRUE 10231.91862 10648.50893 10347.40184 10493.19214 9891.457492 9691.944685 11103.74615 12365.73414 2201.018487 8765.536166 1.167289533 1.214815469 1.180464223 1.197096441 1.128448654 1.105687604 1.266750367 1.410721935 0.251099128 1 13.09762662 -8.251087504 24.99962689 0.625549534 1.203569518 0.612333437 0.185626742 371.4676313 897094.2764 0.11809446 0.043537168 5.61E-09 8.251087504 0.578019985 ADHGEPIGR ddPTM_A459_MK2206_30min_R2 2 ADHGEPIGR 9 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 140.11 0.0032617 199899000 562000 625460 561370 630720 641070 645950 642970 543020 574510 600670 FALSE TRUE 605027.1521 594400.5659 580085.7956 579188.1584 615898.3707 670532.0799 558547.2667 613994.5785 624479.8413 581070.1871 1.041229038 1.022941082 0.998305899 0.996761099 1.059937998 1.153960562 0.961238899 1.056661643 1.074706387 1 19.14835291 -6.27278275 23.64239274 1.054568882 1.01421131 0.11657624 0.048341846 747.1181112 1557175.278 0.015100081 0.017286191 5.34E-07 6.27278275 -0.040357572 ADHGVPLPGS(ph)PPPTVALPLPSR ddPTM_A459_MK2206_30min_R1 1 ADHGVPLPGSPPPTVALPLPSR 22 0 A0A1W2PRX0;V9GYJ6;V9GY36;Q9UK80-2;Q9UK80-3;Q9UK80 A0A1W2PRX0 USP21 Ubiquitin carboxyl-terminal hydrolase 21 1 ADHGVPLPGS(0.997)PPPT(0.003)VALPLPSR 58.622 0.01247 6233300 830.77 1535.2 1000.8 1137.3 978.08 811.02 912.78 830.44 1072.8 1166.2 TRUE FALSE 760.108649 1435.258201 932.8684844 1224.895043 939.1210025 856.9392515 851.8901117 823.1795506 1184.321399 1310.67766 0.57993561 1.09505048 0.711745163 0.934550943 0.716515609 0.653813884 0.649961571 0.628056444 0.903594709 1 10.35609721 -4.505942548 19.29731622 0.789691378 0.134762217 0.151044437 0.157154519 18820986.27 476997159.8 0.038900678 364013836.3 3.12E-05 4.505942548 -0.654929161 ADHGVPLPGS(ph)PPPTVALPLPSR ddPTM_A459_MK2206_30min_R2 2 ADHGVPLPGSPPPTVALPLPSR 22 0 A0A1W2PRX0;V9GYJ6;V9GY36;Q9UK80-2;Q9UK80-3;Q9UK80 A0A1W2PRX0 USP21 Ubiquitin carboxyl-terminal hydrolase 21 1 ADHGVPLPGS(1)PPPTVALPLPSR;ADHGVPLPGS(1)PPPTVALPLPSR 131.75 1.49E-05 4685800 15057.4 20884.7 16735 19141.7 18771.6 19742.5 20430.6 18911.3 18193.4 19707 TRUE FALSE 16210.20612 19847.59617 17292.93655 17577.76188 18034.53266 20493.81467 17748.03768 21383.07184 19775.82905 19063.9622 0.850306245 1.041105514 0.907100862 0.922041373 0.946001281 1.075002901 0.930973189 1.121648879 1.03734097 1 14.21856038 -6.68529714 7.316842874 1.03405063 0.936490495 0.379174369 0.063751823 0.253875195 20.54751833 0.020333925 0.02026876 2.06E-07 6.68529714 -0.097560135 ADHQPLTEASYVNLPTIALCNTDSPLR ddPTM_A459_MK2206_30min_R1 1 ADHQPLTEASYVNLPTIALCNTDSPLR 27 0 C9J9K3;A0A0C4DG17;P08865 C9J9K3 RPSA 40S ribosomal protein SA 0 71.524 0.0098491 0 1342.2 1281.8 1419.5 1226.9 1741.4 1241.2 1334.8 1673.2 1158 1383.7 FALSE TRUE 1228.038842 1198.354587 1323.148295 1321.396051 1672.036351 1311.475671 1245.757927 1658.571389 1278.378244 1555.123202 0.789673024 0.770584983 0.850831814 0.849705058 1.075179348 0.843325898 0.801067032 1.066520894 0.822043065 1 10.60281316 -5.721150231 2.166442386 0.927140564 0.785417537 0.290860229 0.092110767 0.402713716 3.846521759 0.027176978 0.054078031 1.90E-06 5.721150231 -0.141723026 ADIKS(ph)PSLDVTVPEAELNLETPEISVGGK ddPTM_A459_MK2206_30min_R1 2 ADIKSPSLDVTVPEAELNLETPEISVGGK 29 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ADIKS(0.746)PS(0.252)LDVT(0.002)VPEAELNLETPEISVGGK;ADIKS(0.835)PS(0.13)LDVT(0.035)VPEAELNLETPEISVGGK 110.63 4.17E-11 52645000 19525.8 17307.4 14756.4 13862.1 11264.6 9551.9 9830.8 10793.7 9512.6 7848.1 TRUE FALSE 17865.02818 16180.68511 13754.77668 14929.76134 10815.90713 10092.72032 9175.005269 10699.33182 10501.46881 8820.381878 2.025425704 1.834465371 1.559430972 1.69264342 1.226240233 1.144249814 1.040204993 1.21302365 1.190591174 1 13.1066254 -5.770069146 0.732652501 1.090180054 2.070668216 0.907059006 0.103576816 0.299113489 0.278798399 0.055007736 0.197432875 1.70E-06 5.770069146 0.980488162 ADIKS(ph)PSLDVTVPEAELNLETPEISVGGK ddPTM_A459_MK2206_30min_R2 2 ADIKSPSLDVTVPEAELNLETPEISVGGK 29 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ADIKS(0.682)PS(0.306)LDVT(0.012)VPEAELNLETPEISVGGK;ADIKS(0.731)PS(0.195)LDVT(0.073)VPEAELNLET(0.001)PEISVGGK 68.741 0.00023644 16318800 185869 178080 154264 138852 144676 98059 142762 100309 110362 131455 TRUE FALSE 200099.2735 169236.8062 159407.0848 127507.3474 138995.2933 101790.704 124017.1779 113419.7307 119961.0873 127165.6341 1.573532621 1.330837591 1.253539023 1.002687151 1.093025598 0.800457645 0.975241297 0.891905518 0.943345174 1 16.95634932 -5.092101519 0.759971482 0.92020337 1.775960208 0.888932486 0.073915801 0.540056881 0.319600758 0.029411244 0.364712972 8.09E-06 5.092101519 0.855756838 ADIPVKS(ph)SPQAAVPYKK ddPTM_A459_MK2206_30min_R2 1 ADIPVKSSPQAAVPYKK 17 2 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 ADIPVKS(0.5)S(0.5)PQAAVPYKK 58.079 0.026889 12036000 76031 96946 79907 101430 119850 93993 118950 82590 95278 93330 TRUE FALSE 81851.99182 92131.80261 82571.0595 93142.84454 115144.0868 97569.96948 103331.7221 93384.79657 103565.1082 90284.64974 0.906599207 1.020459213 0.914563658 1.031657594 1.275345113 1.080692784 1.144510417 1.034337474 1.14709542 1 16.4621931 -6.00312126 22.60897366 1.118749411 0.957628758 0.493326325 0.075545171 30.25750334 219187.7476 0.020551957 0.029724316 9.93E-07 6.00312126 -0.161120654 ADLDVS(ph)GPKVDIDVPDVNIEGPDAK ddPTM_A459_MK2206_30min_R1 1 ADLDVSGPKVDIDVPDVNIEGPDAK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ADLDVS(1)GPKVDIDVPDVNIEGPDAK 70.632 0.00060133 4085700 1602.9 1712.2 2286.1 1937.4 1340.4 1227.5 1231.9 1630.7 2116.7 1365 TRUE FALSE 1466.564938 1600.735469 2130.925901 2086.618884 1287.00903 1296.999989 1149.722199 1616.442962 2336.73854 1534.106505 0.955973352 1.043431772 1.389033874 1.360152556 0.83893069 0.84544325 0.749440925 1.053670626 1.523191859 1 10.58318293 -4.848656656 5.047421039 1.084199749 0.957456597 0.027382559 0.244862019 1.001373266 39.72780703 0.066678015 0.316261455 1.42E-05 4.848656656 -0.126743152 ADLGPGS(ph)PPWAVK ddPTM_A459_MK2206_30min_R2 2 ADLGPGSPPWAVK 13 0 A0A087WVC5;A0A0C4DH65;A5PL33-3;A5PL33-2;A5PL33 A0A087WVC5 KRBA1 Protein KRBA1 1 ADLGPGS(1)PPWAVK;ADLGPGS(1)PPWAVK 88.087 0.024266 3891000 34186 37433 29888 32166 35824 32452 36136 25185 30995 30336 TRUE FALSE 36803.30644 35574.13165 30884.451 29537.93491 34417.36976 33686.9836 31391.29979 28476.76597 33690.88907 29346.1388 1.254110692 1.212225291 1.052419578 1.00653565 1.172807434 1.147918771 1.069690974 0.970375223 1.148051854 1 14.84088307 -5.176343405 4.439181118 1.073994463 1.242898229 0.500688333 0.06509151 0.188273205 6.589891 0.017300989 0.050110526 6.66E-06 5.176343405 0.168903767 ADLINNLGT(ph)IAK ddPTM_A459_MK2206_30min_R2 2 ADLINNLGTIAK 12 0 P07900;P07900-2;Q14568;P08238;Q58FF8 P07900;P08238;Q58FF8 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 ADLINNLGT(1)IAK;ADLINNLGT(1)IAK 130.98 0.0048884 17707400 199195 230641 211290 218384 192166 174596 235718 208668 185640 205889 TRUE FALSE 214445.5224 219187.7033 218334.3031 200541.3286 184620.5973 181240.3731 204767.9435 235941.6241 201786.6316 199170.8588 1.076691257 1.10050087 1.096216105 1.006880875 0.926945831 0.909974352 1.028101926 1.184619203 1.013133311 1 17.60364705 -5.761545819 24.99969687 1.010775319 1.092072572 0.223106043 0.069405872 4.966843991 1166976.127 0.021972459 0.035089716 1.73E-06 5.761545819 0.081297253 ADLINNLGTIAK ddPTM_A459_MK2206_30min_R2 2 ADLINNLGTIAK 12 0 P07900;P07900-2;Q14568;P08238;Q58FF8 P07900;P08238;Q58FF8 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ; 178.95 0.001438 9553300 63828 82342 81555 85564 85797 69223 84278 71603 68607 80532 FALSE TRUE 68714.72076 78253.01602 84274.003 78573.14749 82428.17868 71857.32977 73212.19736 80961.75795 74574.31285 77904.24744 0.882040749 1.004476888 1.081763906 1.008586182 1.058070406 0.922380129 0.939771576 1.039247032 0.957256059 1 16.24941437 ADLIPYQDS(ph)PEGPDHSSASSGVPNPPK ddPTM_A459_MK2206_30min_R1 1 ADLIPYQDSPEGPDHSSASSGVPNPPK 27 0 Q8WUA4;H0Y4Q6;H7C318 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 ADLIPY(0.009)QDS(0.991)PEGPDHSSASSGVPNPPK 87.155 3.34E-05 5095200 3584.6 1472.8 2263.7 1285.9 4724.5 4575.4 4264.8 3227.8 1663.3 1709.4 TRUE FALSE 3279.710947 1376.920452 2110.046351 1384.940241 4536.313161 4834.455194 3980.302974 3199.579685 1836.205987 1921.173377 1.707139494 0.716708064 1.098311259 0.720882486 2.361220083 2.516407551 2.071808313 1.665429952 0.955773179 1 10.90777201 -2.545197977 5.685279522 1.516433188 1.193615835 0 0.641011241 0 0 0.161384018 0 0.002849719 2.545197977 -0.322817353 ADLNQGIGEPQS(ph)PSR ddPTM_A459_MK2206_30min_R1 6 ADLNQGIGEPQSPSR 15 0 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 ADLNQGIGEPQS(0.997)PS(0.003)R;ADLNQGIGEPQS(0.996)PS(0.004)R;ADLNQGIGEPQS(0.981)PS(0.019)R;ADLNQGIGEPQS(0.996)PS(0.004)R;ADLNQGIGEPQS(1)PSR;ADLNQGIGEPQS(0.956)PS(0.044)R 203.06 1.07E-05 412994400 18289.9 16697.3 15654.4 12342.7 15960.8 15006.1 17877.6 15103.5 15090.9 15444.6 TRUE FALSE 16734.24796 15610.30274 14591.82294 13293.33689 15325.04754 15855.73241 16685.01792 14971.45169 16659.65306 17357.99365 0.964065796 0.899314924 0.840639952 0.765833723 0.882881274 0.913454212 0.961229636 0.862510495 0.959768358 1 14.08331258 -6.790246001 3.425887173 0.93421829 0.863683827 0.269572264 0.057065429 0.369058089 9.015666477 0.021903269 0.020053235 1.62E-07 6.790246001 -0.070534463 ADLNQGIGEPQS(ph)PSR ddPTM_A459_MK2206_30min_R2 3 ADLNQGIGEPQSPSR 15 0 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 ADLNQGIGEPQS(0.953)PS(0.047)R;ADLNQGIGEPQS(0.874)PS(0.126)R;ADLNQGIGEPQS(0.938)PS(0.062)R 198.67 2.45E-05 416350000 61630 66481 55423 67377.6 59942 64862 78042 51703.3 57397.8 71694 TRUE FALSE 66348.44019 63179.65021 57270.77516 61872.63455 57588.3759 67330.36886 67794.99165 58461.09883 62390.15689 69354.63065 0.956654798 0.910965131 0.825767142 0.892119733 0.830346516 0.970812882 0.977512114 0.84293 0.899581705 1 16.08170459 -6.769917604 24.99635978 0.930809503 0.882022884 0.197429509 0.054416358 377.5877634 1113235.282 0.019867133 0.017797029 1.70E-07 6.769917604 -0.048786619 ADLNQGIGEPQSPS(ph)RR ddPTM_A459_MK2206_30min_R2 2 ADLNQGIGEPQSPSRR 16 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 ADLNQGIGEPQS(0.105)PS(0.895)RR;ADLNQGIGEPQS(0.365)PS(0.635)RR 150.91 0.00038868 137679000 31785 30135 30077 32908 35775 32662 35419 25790 30458 36350 TRUE FALSE 34218.48404 28638.53972 31079.75217 30219.31113 34370.29375 33904.9753 30768.44275 29160.84155 33107.18178 35163.90248 0.97311395 0.814430075 0.883853895 0.859384454 0.977431153 0.964198309 0.875000799 0.829283427 0.941510454 1 15.10180757 -6.216965519 24.99916682 0.921537838 0.877902218 0.122979622 0.059706022 1106.628203 622045.2687 0.017992182 0.023227728 6.07E-07 6.216965519 -0.043635619 ADNDAGNAAIDSLLNYET(ph)VK ddPTM_A459_MK2206_30min_R1 1 ADNDAGNAAIDSLLNYETVK 20 0 A0A2R8YF35;A0A2R8Y473;B4DGL8;A0A087WW65;A0A5F9ZA98;O75027-3;O75027;O75027-2 A0A2R8YF35 ABCB7 "ATP-binding cassette sub-family B member 7, mitochondrial" 1 ADNDAGNAAIDS(0.003)LLNY(0.001)ET(0.996)VK 69.133 0.016939 8231100 3802.7 1181.8 995.11 641.65 4600.3 5214.7 5530 3909.6 1349.7 1476 TRUE FALSE 3479.260396 1104.864605 927.5647057 691.0699942 4417.06031 5509.951808 5161.10379 3875.418779 1490.006145 1658.858023 2.097382867 0.666039281 0.559158585 0.416593816 2.662711485 3.321533085 3.111239008 2.336196784 0.898211977 1 10.6959747 -3.092646079 8.809489451 1.757796464 5.150123239 0 1.062376958 0 0 0.274609853 0 0.000807893 3.092646079 3.392326775 ADNDAGNAAIDSLLNYET(ph)VK ddPTM_A459_MK2206_30min_R2 1 ADNDAGNAAIDSLLNYETVK 20 0 A0A2R8YF35;A0A2R8Y473;B4DGL8;A0A087WW65;A0A5F9ZA98;O75027-3;O75027;O75027-2 A0A2R8YF35 ABCB7 "ATP-binding cassette sub-family B member 7, mitochondrial" 1 ADNDAGNAAIDS(0.002)LLNYET(0.998)VK 69.525 0.01631 80653000 18703 48662 34850 78091 55970 72883 51409 47869 48954 26793 TRUE FALSE 20134.91606 46245.51584 36011.88161 71710.7155 53772.33657 75656.61364 44658.93655 54125.64266 53211.93043 25918.7466 0.776847599 1.7842497 1.389414471 2.7667509 2.074650345 2.918991986 1.723036119 2.08828164 2.053028692 1 14.66170833 -4.659522348 1.238775289 2.119920084 1.04E-12 0.309781429 0.540834374 2.095512511 2.293202848 0.15504352 6.123872049 2.19E-05 4.659522348 -2.119920084 ADNPS(ph)PNLMPASAQAQNAQR ddPTM_A459_MK2206_30min_R2 2 ADNPSPNLMPASAQAQNAQR 20 0 Q92585 Q92585 MAML1 Mastermind-like protein 1 1 ADNPS(0.994)PNLMPAS(0.006)AQAQNAQR;ADNPS(1)PNLMPASAQAQNAQR 220.1 1.58E-19 16175400 53385 64048 56749 68751 57130 62410 67989 52285 51852 58777 TRUE FALSE 57472.19665 60867.46945 58640.98334 63133.82338 54886.78914 64785.05628 59061.96263 59118.82902 56361.99323 56859.1113 1.010782535 1.070496321 1.031338373 1.110355437 0.965312118 1.139396216 1.038742275 1.039742403 0.99125702 1 15.79510393 -8.127288398 2.710786956 0.994753226 1.054175629 0.188226187 0.04615589 0.450727492 5.947852019 0.036527613 0.011547228 7.46E-09 8.127288398 0.059422403 ADNSSDS(ph)PTTLK ddPTM_A459_MK2206_30min_R2 2 ADNSSDSPTTLK 12 0 A0A2R8YH03;Q5VWN6;J3KPH3 A0A2R8YH03 FAM208B Protein FAM208B 1 ADNSSDS(0.943)PT(0.037)T(0.02)LK;ADNS(0.001)S(0.02)DS(0.97)PT(0.007)T(0.002)LK 107.46 0.0084695 9388000 46244 54725 39130 44227 46192 46263 48742 42665 36261 58804 TRUE FALSE 49784.4762 52007.43608 40434.57467 40613.51262 44378.26998 48023.57088 42342.11685 48241.46199 39414.91624 56885.2303 0.875174029 0.914252009 0.710809721 0.713955317 0.780136949 0.844218625 0.744342892 0.848048988 0.692884885 1 15.7957665 -10.08337024 13.16678838 0.999997475 0.791977492 0.426218603 0.072560413 0 0 0.072148264 0.017498524 8.25E-11 10.08337024 -0.208019982 ADPEAAWEPTEAEAR ddPTM_A459_MK2206_30min_R2 1 ADPEAAWEPTEAEAR 15 0 K7EPL2;Q9UBT2-2;Q9UBT2 K7EPL2 UBA2 SUMO-activating enzyme subunit 2 0 122.34 0.021739 1868100 6213.1 4137.5 7576.2 6247.8 7916.7 5474.9 7399.9 4152.8 5883 7026.1 FALSE TRUE 6688.779713 3932.037766 7828.786727 5737.334754 7605.85058 5683.251156 6428.284241 4695.585219 6394.692706 6796.838932 0.984101548 0.578509776 1.151827608 0.844118098 1.119027633 0.836160929 0.945775574 0.690848388 0.940833345 1 12.73064822 -10.37242083 17.97956224 1 0.895290491 0.031682444 0.166325408 0 0 0.152961275 0.037098558 4.24E-11 10.37242083 -0.104709509 ADPSLLGFSVNAS(ph)SER ddPTM_A459_MK2206_30min_R1 1 ADPSLLGFSVNASSER 16 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ADPSLLGFSVNAS(0.886)S(0.114)ER 170.09 1.03E-05 4338900 686.8 699.87 620.95 733.66 798.02 590.99 721.45 609.61 664.3 621.1 TRUE FALSE 628.3840535 654.3083358 578.8016441 790.1666203 766.2331736 624.4513431 673.3233869 604.280244 733.3563622 698.0465571 0.900203643 0.937341971 0.82917341 1.131968366 1.097682047 0.894569763 0.964582348 0.865673268 1.050583739 1 9.447179452 -5.728006429 24.99964916 0.993237178 0.893749963 0.279682453 0.081504902 299.9696012 224301.6252 0.023572273 0.040825314 1.87E-06 5.728006429 -0.099487215 ADPSLLGFSVNAS(ph)SER ddPTM_A459_MK2206_30min_R2 2 ADPSLLGFSVNASSER 16 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ADPSLLGFS(0.001)VNAS(0.918)S(0.082)ER;ADPSLLGFSVNAS(0.769)S(0.231)ER 111.58 0.0025971 4304700 11278.9 14974.2 11256.7 13246.1 15190.5 12820.6 15356.6 11699.2 10868.5 12748.7 TRUE FALSE 12142.42126 14230.603 11631.99276 12163.85126 14594.04464 13308.49692 13340.25997 13228.32561 11813.82248 12332.71096 0.984570326 1.153890904 0.943182143 0.986307982 1.183360632 1.079121773 1.081697286 1.072621068 0.957925838 1 13.59020235 -8.256734477 24.70559429 0.978962915 1.062727237 0.173222331 0.071213984 548.2823192 2879096.557 0.052294423 0.018291159 5.54E-09 8.256734477 0.083764323 ADQEQQDPLEYLQS(ph)DEEDDEKR ddPTM_A459_MK2206_30min_R1 2 ADQEQQDPLEYLQSDEEDDEKR 22 1 Q7RTV3 Q7RTV3 ZNF367 Zinc finger protein 367 1 ADQEQQDPLEYLQS(1)DEEDDEKR;ADQEQQDPLEYLQS(1)DEEDDEKR 114.85 1.73E-05 11090800 1246.19 1411.67 1314.59 812.8 1258.99 1014.56 1264.82 910.67 1295.15 1276.64 TRUE FALSE 1140.194996 1319.770026 1225.359293 875.4019968 1208.841762 1072.00351 1180.446166 902.7081082 1429.785477 1434.799801 0.794671839 0.919828693 0.854028062 0.610121354 0.842515981 0.747145009 0.822725348 0.629152658 0.99650521 1 10.48663374 -8.295355061 22.93204092 0.998253274 0.781897726 0.481485218 0.091533833 234.174514 158332.1611 0.08835505 0.022822778 5.07E-09 8.295355061 -0.216355547 ADQEQQDPLEYLQS(ph)DEEDDEKR ddPTM_A459_MK2206_30min_R2 2 ADQEQQDPLEYLQSDEEDDEKR 22 1 Q7RTV3 Q7RTV3 ZNF367 Zinc finger protein 367 1 ADQEQQDPLEY(0.068)LQS(0.932)DEEDDEKR;ADQEQQDPLEY(0.255)LQS(0.745)DEEDDEKR 103.33 4.50E-05 6170000 10062 9645.8 9775.3 7063.9 9043.1 9305.9 11992.6 8037.3 8225.9 10042.5 TRUE FALSE 10832.35446 9166.803598 10101.20362 6486.756774 8688.022456 9660.042545 10417.95721 9087.802706 8941.373913 9714.814047 1.115034668 0.943590228 1.039773234 0.667718058 0.894306614 0.994362064 1.072378448 0.935458225 0.920385493 1 13.24597067 -9.353600704 15.81559134 1.000001835 0.949900234 0.013077958 0.11668815 0 0 0.117224233 0.028431053 4.43E-10 9.353600704 -0.050101601 ADQSFTS(ph)PPPR ddPTM_A459_MK2206_30min_R1 1 ADQSFTSPPPR 11 0 Q16594;D6RIE8;D6RHW1;D6RIY1;D6RGK3;D6RIV9;Q9HBM6 Q16594 TAF9;TAF9B Transcription initiation factor TFIID subunit 9;Transcription initiation factor TFIID subunit 9B 1 ADQS(0.01)FT(0.003)S(0.987)PPPR 101.46 0.013485 0 1626.4 1156.3 957.68 903.6 1664.4 1876.6 1435.4 1377.7 903.33 829.03 TRUE FALSE 1488.066139 1081.02466 892.6753498 973.1954286 1598.103424 1982.85147 1339.647085 1365.654914 997.2343861 931.7364953 1.597089034 1.160225735 0.958077047 1.044496415 1.71518818 2.128124722 1.437796085 1.465709373 1.070296582 1 9.863778193 -6.254993261 24.80993874 1.524148751 1.171283389 0.129016691 0.337021269 828.0252488 3186916.059 0.105159556 0.132510891 5.56E-07 6.254993261 -0.352865362 ADRDESSPYAAMLAAQDVAQR ddPTM_A459_MK2206_30min_R1 6 ADRDESSPYAAMLAAQDVAQR 21 1 P62263;A0A2R8Y811;E5RH77 P62263 RPS14 40S ribosomal protein S14 0 ;;;;; 271.58 1.35E-59 273826000 21679.82 22996.13 20494.01 19014.71 22013.51 21690.76 21788.57 19320.06 20371.41 18735.39 FALSE TRUE 19835.83746 21499.07776 19102.9337 20479.22626 21136.66528 22918.87209 20335.09425 19151.14675 22489.09097 21056.47156 0.942030454 1.02101996 0.907223874 0.972585849 1.003808507 1.088447892 0.965740827 0.909513576 1.068037012 1 14.36197608 -6.175238687 4.699543434 1.003456241 0.960126064 0.148304987 0.053423794 0.516954289 19.97257663 0.016453752 0.021428202 6.68E-07 6.175238687 -0.043330177 ADRDESSPYAAMLAAQDVAQR ddPTM_A459_MK2206_30min_R2 5 ADRDESSPYAAMLAAQDVAQR 21 1 P62263;A0A2R8Y811;E5RH77 P62263 RPS14 40S ribosomal protein S14 0 ;;;; 145.19 1.01E-05 50765400 150897 146743 129399 164347 155706 172274 170790 138823 133218 154472 FALSE TRUE 162449.7903 139455.956 133713.0981 150919.3244 149592.2001 178830.0078 148365.0678 156967.6428 144805.0608 149431.5913 1.087118118 0.933242796 0.894811445 1.009955948 1.001074798 1.196734949 0.992862798 1.050431448 0.969039141 1 17.18912565 -6.231710122 3.031407114 1.044910814 0.96826536 0.111186612 0.075208299 0.481836277 8.963186644 0.024094315 0.03073751 5.87E-07 6.231710122 -0.076645454 ADRDQS(ph)PFSK ddPTM_A459_MK2206_30min_R2 1 ADRDQSPFSK 10 1 Q13427;E9PG73 Q13427 PPIG Peptidyl-prolyl cis-trans isomerase G 1 ADRDQS(0.997)PFS(0.003)K 110.64 0.044326 29712000 47638 50824 47144 49065 43964 41174 52020 39711 39165 45563 TRUE FALSE 51285.20191 48300.15407 48715.75743 45056.23255 42237.75246 42740.90542 45189.71151 44901.36405 42571.50091 44076.28304 1.163555508 1.095830926 1.10526011 1.022233034 0.958287531 0.969703035 1.025261397 1.018719387 0.965859595 1 15.42771495 -5.773417305 2.576464042 0.99085639 1.125891897 0.84289291 0.025619021 0.108315916 1.466560178 0.007941758 0.014263997 1.68E-06 5.773417305 0.135035507 ADREVQAEQPSSS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 ADREVQAEQPSSSSPR 16 1 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 "RNA-binding motif protein, X-linked 2" 1 ADREVQAEQPS(0.008)S(0.005)S(0.493)S(0.493)PR 63.727 0.033284 8416800 1171.8 1207.4 817.48 930.5 1286.6 887.4 996.72 1474.4 621.68 493.7 TRUE FALSE 1072.132257 1128.798041 761.9917352 1002.167271 1235.351998 937.6438211 930.2306274 1461.509476 686.3058607 554.8632832 1.932245814 2.034371483 1.373296375 1.806151716 2.226407901 1.689864602 1.676504205 2.633999258 1.236891828 1 9.115988529 -8.50443681 24.23558215 0.999999869 1.899875423 0.502764651 0.323228583 345.0056719 453391.3554 0.306679928 0.079184417 3.13E-09 8.50443681 0.899875554 ADREVQAEQPSSS(ph)SPR ddPTM_A459_MK2206_30min_R2 1 ADREVQAEQPSSSSPR 16 1 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 "RNA-binding motif protein, X-linked 2" 1 ADREVQAEQPS(0.065)S(0.065)S(0.75)S(0.12)PR 110.32 0.014699 0 18114 22553 23319 23789 30865 28912 25158 25475 30135 24638 TRUE FALSE 19500.82177 21433.05082 24096.44382 21845.3626 29653.08502 30012.26642 21854.72438 28804.66997 32756.08783 23834.06408 0.818191212 0.899261273 1.011008603 0.916560538 1.244147239 1.259217325 0.916953328 1.208550496 1.374339169 1 14.54073735 -6.250726302 24.32312617 1.16971719 0.917523881 0.482281395 0.129831665 466.6407317 1059466.896 0.039397972 0.050299758 5.61E-07 6.250726302 -0.252193309 ADREVQAEQPSSSS(ph)PR ddPTM_A459_MK2206_30min_R1 2 ADREVQAEQPSSSSPR 16 1 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 "RNA-binding motif protein, X-linked 2" 1 ADREVQAEQPSSS(0.029)S(0.971)PR;ADREVQAEQPSS(0.003)S(0.245)S(0.752)PR 223.68 1.64E-10 13451100 5961.1 5696.1 6110.9 5263.7 6259.2 4833.7 5864.8 6835.2 2167.6 2987.9 TRUE FALSE 5454.077142 5325.282855 5696.109134 5669.111086 6009.88281 5107.379917 5473.569893 6775.440567 2392.929777 3358.063609 1.624173267 1.58581953 1.696248135 1.688208368 1.789687007 1.520930069 1.629978026 2.017662961 0.712592153 1 11.71341384 -8.269468919 24.99997531 0.856295955 1.68563311 0.844642944 0.143686059 231.47285 720681.5235 0.125829696 0.034780633 5.38E-09 8.269468919 0.829337155 ADS(ph)PAGPESSR ddPTM_A459_MK2206_30min_R1 1 ADSPAGPESSR 11 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 ADS(1)PAGPESSR 136.27 0.0014288 3249500 2294.9 2133.4 1940.8 1901.2 2002.6 1695 2250.7 2133.8 1714.1 2519 TRUE FALSE 2099.706704 1994.515272 1809.063903 2047.630753 1922.832201 1790.969435 2100.55991 2115.144412 1892.286829 2831.072737 0.741664697 0.704508664 0.639002976 0.723270274 0.679188555 0.632611593 0.741966069 0.74711765 0.668399227 1 11.4671331 -14.52287875 0.427154512 6.874149574 0.69264671 0.835571596 0.040195274 389.2554685 2.469020613 2149.779829 0.023348051 3.00E-15 14.52287875 -6.181502864 ADS(ph)PAGPESSR ddPTM_A459_MK2206_30min_R2 2 ADSPAGPESSR 11 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 ADS(0.999)PAGPES(0.001)SR;ADS(0.999)PAGPES(0.001)SR 113.95 0.0068056 13048500 58941 55141 51456 61692 54278 63079 72045 49212 53547 62629 TRUE FALSE 63453.56828 52402.77812 53171.51736 56651.56626 52146.77299 65479.51555 62585.40496 55644.17737 58204.42127 60585.42086 1.047340555 0.8649404 0.877628918 0.935069287 0.860714876 1.080780072 1.03301098 0.918441707 0.960700123 1 15.88668305 -6.746833773 24.99993589 0.99564073 0.91304005 0.288065626 0.063774737 324.4178188 555294.4807 0.021565117 0.021474413 1.79E-07 6.746833773 -0.08260068 ADS(ph)PLEQPEGSPLTQDDR ddPTM_A459_MK2206_30min_R2 2 ADSPLEQPEGSPLTQDDR 18 0 P09603-3;P09603-2;P09603 P09603-3 CSF1 Macrophage colony-stimulating factor 1;Processed macrophage colony-stimulating factor 1 1 ADS(1)PLEQPEGSPLTQDDR;ADS(1)PLEQPEGSPLTQDDR 276.8 8.49E-67 4224700 16540.3 8222 9822.2 7627.2 10630.6 9556.2 17213.7 9256.9 13230.4 14363.8 TRUE FALSE 17806.63809 7813.707436 10149.66725 7004.033362 10213.18923 9919.867887 14953.52051 10466.80861 14381.15628 13895.11038 1.281503896 0.562335039 0.730448839 0.504064608 0.735020374 0.713910693 1.076171409 0.753272793 1.034979635 1 13.76228967 -7.240274784 23.99037248 0.945545363 0.732441756 0.186658975 0.211639173 805.3721927 912901.6881 0.078813237 0.060973636 5.75E-08 7.240274784 -0.213103607 ADS(ph)PVNGLPK ddPTM_A459_MK2206_30min_R1 1 ADSPVNGLPK 10 0 Q96S94;Q96S94-3;A0A0A0MSF3 Q96S94 CCNL2 Cyclin-L2 1 ADS(1)PVNGLPK 115.92 0.0064967 41501000 6998.7 7474.1 8135.4 6270.2 5668.1 4460.2 6172.5 6943 6604.8 5729.6 TRUE FALSE 6403.423813 6987.534732 7583.191715 6753.13189 5442.327575 4712.73267 5760.743787 6882.298083 7291.392596 6439.426104 0.994409084 1.08511762 1.177619184 1.04871642 0.845157237 0.731856006 0.894605155 1.06877507 1.132304724 1 12.6527164 -6.058689921 7.723940425 0.936281996 1.090202987 0.244447986 0.11345709 0.436168898 52.0867387 0.037789953 0.049195344 8.74E-07 6.058689921 0.153920991 ADS(ph)PVNGLPK ddPTM_A459_MK2206_30min_R2 2 ADSPVNGLPK 10 0 Q96S94;Q96S94-3;A0A0A0MSF3 Q96S94 CCNL2 Cyclin-L2 1 ADS(1)PVNGLPK;ADS(1)PVNGLPK 96.745 0.021371 79094000 240340 265920 234880 244560 265360 204538 274170 205476 209860 261010 TRUE FALSE 258740.6152 252714.7995 242710.782 224578.6657 254940.6331 212321.8369 238171.1497 232332.4187 228113.2435 252493.2651 1.024742641 1.000877387 0.961256459 0.889444182 1.009692805 0.840900991 0.943277238 0.920152934 0.903442883 1 17.94588538 -5.329815995 2.415527122 0.926225553 1.019363811 0.326844651 0.047156323 0.323475773 3.58846999 0.012319816 0.037293756 4.68E-06 5.329815995 0.093138258 ADS(ph)VPGTYR ddPTM_A459_MK2206_30min_R1 1 ADSVPGTYR 9 0 A0A0U1RQC1;H0YKX3;H0YMA4;A0A0U1RQM0;Q15004-2;Q15004 A0A0U1RQC1 KIAA0101 PCNA-associated factor 1 ADS(0.999)VPGT(0.001)YR 84.507 0.044803 0 3410.8 4133.2 3288.2 2861.8 3347 3002.9 3214 2794.7 3096.3 3175.1 TRUE FALSE 3120.693549 3864.127929 3065.006145 3082.216332 3213.681903 3172.921603 2999.599924 2770.266233 3418.171465 3568.455359 0.874522233 1.082857298 0.858916769 0.863739636 0.900580666 0.889158273 0.840587768 0.776320832 0.957885449 1 11.80108401 -5.304813315 24.99753542 0.876141246 0.97869001 0.188113765 0.074946811 546.8371564 315155.5535 0.018392346 0.038287122 4.96E-06 5.304813315 0.102548764 ADS(ph)VPGTYR ddPTM_A459_MK2206_30min_R2 1 ADSVPGTYR 9 0 A0A0U1RQC1;H0YKX3;H0YMA4;A0A0U1RQM0;Q15004-2;Q15004 A0A0U1RQC1 KIAA0101 PCNA-associated factor 1 ADS(1)VPGTYR 95.483 0.022335 6944300 30607 42331 31458 50455 38554 35542 40252 30539 34763 36687 TRUE FALSE 32950.29545 40228.9041 32506.79402 46332.6651 37040.17624 36894.57572 34966.86405 34530.55216 37786.6229 35489.90619 0.928441323 1.133530866 0.915944771 1.305516697 1.043681999 1.039579409 0.985262228 0.972968257 1.064714646 1 15.11512114 -6.890945238 3.060567671 1.004658689 1.074338533 0.064488158 0.10452473 0.690947596 12.96144229 0.038999469 0.033775326 1.29E-07 6.890945238 0.069679844 ADSEGSNSGGT(ph)WPK ddPTM_A459_MK2206_30min_R1 1 ADSEGSNSGGTWPK 14 0 Q8TDM6-4;Q8TDM6;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 ADSEGS(0.006)NS(0.018)GGT(0.976)WPK 92.269 0.037234 8168200 4432.8 4696 4095.9 3519.4 3962.9 3564.9 4362.8 3401.9 3709.8 3694.8 TRUE FALSE 4055.767082 4390.289546 3817.88172 3790.464798 3805.049301 3766.741557 4071.765572 3372.157547 4095.446986 4152.539718 0.976695554 1.057254077 0.919408839 0.912806392 0.916318581 0.907093445 0.980548254 0.812071112 0.986251129 1 12.01977825 -5.276231635 24.39510417 0.922583245 1.016974813 0.289764696 0.054082817 538.6956724 888406.9469 0.013073547 0.027413558 5.29E-06 5.276231635 0.094391568 ADSEGSNSGGT(ph)WPK ddPTM_A459_MK2206_30min_R2 1 ADSEGSNSGGTWPK 14 0 Q8TDM6-4;Q8TDM6;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 ADSEGS(0.005)NS(0.013)GGT(0.982)WPK 97.45 0.032147 0 12958 12593 11488 13360 12140 12359 13442 9859.4 9702.9 12544 TRUE FALSE 13950.07444 11967.64993 11871.00419 12268.44526 11663.3226 12829.33041 11677.04925 11148.05743 10546.8407 12134.69031 1.14960284 0.986234476 0.978270058 1.011022527 0.961155358 1.057244155 0.962286549 0.918693197 0.869147909 1 13.56684967 -7.510130739 4.236099571 0.922237417 1.016688522 0.349959798 0.058125294 0.234373281 10.06550541 0.026902392 0.016182876 3.09E-08 7.510130739 0.094451105 ADSEPES(ph)PLNASYVYK ddPTM_A459_MK2206_30min_R1 1 ADSEPESPLNASYVYK 16 0 Q5T1V6;Q5T1V6-2 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 1 ADSEPES(0.943)PLNAS(0.057)YVYK 234.04 1.04E-15 9187900 5334.3 5350.6 5539.4 4556.3 5217.6 4705.3 4939.3 4853.6 4737.6 4361.3 TRUE FALSE 4880.589773 5002.274967 5163.400962 4907.227015 5009.771944 4971.71002 4609.808309 4811.165487 5230.090474 4901.61077 0.99571141 1.020536963 1.053409013 1.001145796 1.022066455 1.014301268 0.940468047 0.981547845 1.067014645 1 12.25904021 -7.024469277 24.93500504 0.993100628 1.01950343 0.084005956 0.032364838 1621.304437 1652158.683 0.012541958 0.009760569 9.45E-08 7.024469277 0.026402801 ADSEPES(ph)PLNASYVYK ddPTM_A459_MK2206_30min_R2 1 ADSEPESPLNASYVYK 16 0 Q5T1V6;Q5T1V6-2 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 1 ADSEPES(1)PLNASYVYK 222.11 5.75E-11 10694000 34848 44518 38857 49139 50820 39194 41789 34715 37484 39095 TRUE FALSE 37515.98967 42307.30086 40152.47299 45124.18651 48824.55145 40685.55513 36302.0541 39252.36969 40744.29056 37819.33335 0.991979137 1.118668604 1.061691718 1.193151294 1.290994503 1.075787211 0.959880857 1.037891634 1.077340264 1 15.20683631 -6.998396906 24.99880421 1.021349842 1.135487452 0.313305094 0.07840516 68.49734744 1068130.756 0.029670788 0.025979737 1.00E-07 6.998396906 0.11413761 ADSEPESPLNAS(ph)YVYK ddPTM_A459_MK2206_30min_R1 1 ADSEPESPLNASYVYK 16 0 Q5T1V6;Q5T1V6-2 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 1 ADSEPES(0.026)PLNAS(0.968)Y(0.006)VYK 153.41 0.0001436 8670100 2298.3 2307 2815.8 2132 2604.4 2347.3 2277.3 1966.5 2179.7 1834.9 TRUE FALSE 2102.817516 2156.813881 2624.671341 2296.207009 2500.661233 2480.202098 2125.385472 1949.307098 2406.287615 2062.221265 1.019685691 1.045869285 1.272739927 1.113462968 1.212605687 1.202684765 1.03062921 0.945246338 1.166842596 1 11.00998342 -10.95665731 5.802811094 0.999941311 1.113309929 0.106930887 0.097224695 7.84E-05 7.65E-06 0.10000687 0.024242686 1.10E-11 10.95665731 0.113368617 ADSGPTQPPLS(ph)LSPAPETK ddPTM_A459_MK2206_30min_R1 1 ADSGPTQPPLSLSPAPETK 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 ADSGPTQPPLS(0.5)LS(0.5)PAPETK 221.51 2.34E-19 106860000 9225.6 7132.3 7155.3 5299.7 5965.5 4962.1 5371 5651.1 5408.8 5313.1 TRUE FALSE 8440.914274 6667.985974 6669.618172 5707.883812 5727.881503 5243.049814 5012.71039 5601.693028 5971.064116 5971.32694 1.413574296 1.116667374 1.116940713 0.955881979 0.959230932 0.87803764 0.839463396 0.938098531 0.999955986 1 12.54383585 -3.716137906 0.682562612 0.921399167 3.097806366 0.862088709 0.057731452 3.921816431 0.461718326 0.024453899 9.235747716 0.000192248 3.716137906 2.176407199 ADSGPTQPPLSLS(ph)PAPETK ddPTM_A459_MK2206_30min_R1 5 ADSGPTQPPLSLSPAPETK 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 ADSGPTQPPLS(0.131)LS(0.834)PAPET(0.035)K;ADSGPTQPPLS(0.001)LS(0.809)PAPET(0.191)K;ADSGPTQPPLS(0.035)LS(0.964)PAPETK;ADSGPTQPPLS(0.004)LS(0.996)PAPETK;ADSGPTQPPLS(0.199)LS(0.801)PAPETK 241.08 7.10E-30 128048000 23644.8 20441.3 20861.9 15965.25 16442.57 13533.86 15663.61 16397.75 14624.26 14697.31 TRUE FALSE 21633.6856 19110.56765 19445.85235 17194.89632 15787.62762 14300.13546 14618.71916 16254.3862 16144.50416 16518.12372 1.309693883 1.156945424 1.177243413 1.040971518 0.955776085 0.865723959 0.885010877 0.984033446 0.977381235 1 14.0117622 -5.783567256 1.434985057 0.934339901 1.245745428 0.848955372 0.05143716 0.159838822 0.663373146 0.018043485 0.041229588 1.65E-06 5.783567256 0.311405527 ADSGPTQPPLSLS(ph)PAPETK ddPTM_A459_MK2206_30min_R2 4 ADSGPTQPPLSLSPAPETK 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 ADSGPTQPPLS(0.143)LS(0.849)PAPET(0.008)K;ADSGPTQPPLS(0.016)LS(0.983)PAPET(0.001)K;ADSGPTQPPLS(0.004)LS(0.996)PAPETK;ADSGPTQPPLS(0.003)LS(0.996)PAPETK 250.38 1.07E-37 364534000 529978 525539 471565 534802 515265 395234 547653 433882 435829 528638 TRUE FALSE 570553.5232 499441.4975 487286.7417 491106.9659 495033.1071 410274.9068 475745.5033 490591.8671 473736.6186 511388.5854 1.115694678 0.976637946 0.952869805 0.960340101 0.968017514 0.802276231 0.930301373 0.959332846 0.926373079 1 18.96406043 -1.522878779 0.919624748 0.927826845 108.1602615 0.537142078 0.049583542 772.1625332 1.543713346 0.016425374 173952.6656 0.029999998 1.522878779 107.2324346 ADT(ph)PGPEDGGVK ddPTM_A459_MK2206_30min_R1 2 ADTPGPEDGGVK 12 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ADT(1)PGPEDGGVK;ADT(1)PGPEDGGVK 145.83 0.0015729 8396600 6845.4 8182.3 8124.6 6767.2 4998.5 4535.6 5689.9 5581.9 7989.9 6813.2 TRUE FALSE 6263.162783 7649.630783 7573.124788 7288.410917 4799.399161 4792.401752 5310.337153 5533.098037 8820.478697 7657.270653 0.817936712 0.999002272 0.989010985 0.951828823 0.626776743 0.625862918 0.693502606 0.722594027 1.151908963 1 12.90261454 -6.217607705 23.93203192 0.775194741 0.947239403 0.128323448 0.163518765 478.8135067 261430.6516 0.049127516 0.063422818 6.06E-07 6.217607705 0.172044661 ADT(ph)PGPEDGGVK ddPTM_A459_MK2206_30min_R2 2 ADTPGPEDGGVK 12 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ADT(1)PGPEDGGVK;ADT(1)PGPEDGGVK 128.21 0.0058066 20761000 165731 155585 153919 124144 139520 95633 187580 127391 101777 172809 TRUE FALSE 178419.4928 147858.8751 159050.5826 114001.0381 134041.7438 99272.38083 162950.5207 144041.4411 110629.3795 167170.2565 1.067292092 0.884480758 0.951428717 0.681945703 0.801827709 0.593839974 0.974757855 0.861645152 0.661776693 1 17.35095866 -4.852014225 1.227370648 0.79567803 1.14750474 0.263603287 0.129705531 1.752816922 2.477444196 0.038851954 0.763790095 1.41E-05 4.852014225 0.351826709 ADTLESSLEDPLR ddPTM_A459_MK2206_30min_R1 1 ADTLESSLEDPLR 13 0 Q9H867-3;Q9H867-1;Q9H867-5;Q9H867 Q9H867-3 VCPKMT Protein-lysine methyltransferase METTL21D 0 88.101 0.034068 9693100 1394.5 1093.3 1493.7 1123.5 2464.2 1992.1 2063 1547.6 1237.1 1025 FALSE TRUE 1275.890452 1022.125971 1392.311806 1210.032165 2366.045696 2104.89098 1925.381034 1534.069496 1365.700972 1151.984738 1.107558468 0.887273882 1.20862001 1.050389058 2.053886321 1.827186516 1.671359845 1.331675191 1.185520022 1 10.16990589 -6.151249408 24.99988261 1.552049637 1.061233083 0.348240032 0.297269752 28.390573 6417.302589 0.091460025 0.118074378 7.06E-07 6.151249408 -0.490816555 ADTS(ph)QEICSPR ddPTM_A459_MK2206_30min_R1 3 ADTSQEICSPR 11 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;H7C3P6 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ADT(0.043)S(0.957)QEICSPR;ADT(0.034)S(0.966)QEICSPR;ADT(0.041)S(0.958)QEICS(0.002)PR 145.83 0.00069482 29634200 9649.4 9613.4 9940.9 8338.6 10163.5 8352.7 9466.6 8334.3 7492.8 7932.9 TRUE FALSE 8828.667859 8987.565913 9266.139405 8980.840417 9758.666273 8825.622656 8835.100387 8261.434094 8271.703373 8915.687542 0.990239711 1.008062011 1.039307329 1.007307667 1.094550053 0.989898156 0.990961196 0.926617723 0.927769545 1 13.12213034 -7.383513745 2.266286952 0.947104153 1.025768943 0.452993903 0.034230269 0.261522942 2.622901821 0.017635429 0.010465039 4.14E-08 7.383513745 0.07866479 ADTS(ph)QEICSPR ddPTM_A459_MK2206_30min_R2 3 ADTSQEICSPR 11 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;H7C3P6 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ADT(0.042)S(0.958)QEICSPR;ADT(0.043)S(0.957)QEICSPR;ADT(0.041)S(0.959)QEICSPR 151.66 0.00059192 57831000 185042 214768 206007 237072 215660 251647 244303 185969 190390 221106 TRUE FALSE 199208.9578 204102.9334 212875.1706 217702.4592 207192.1048 261223.6029 212225.7226 210275.7868 206949.7781 213891.3293 0.931355929 0.954236593 0.995249182 1.017818066 0.968679308 1.221291222 0.992212837 0.983096358 0.967546364 1 17.70651847 -5.306350823 1.376582957 1.027433645 0.925856525 0.169160103 0.069655632 1.094103672 3.32525027 0.022577732 0.117897307 4.94E-06 5.306350823 -0.10157712 ADTSQEICS(ph)PR ddPTM_A459_MK2206_30min_R1 3 ADTSQEICSPR 11 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;H7C3P6 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ADTSQEICS(1)PR;ADTSQEICS(1)PR;ADTS(0.001)QEICS(0.998)PR 118.73 0.0052246 43548000 11579.3 11157.1 10733 9764.9 10832.6 9282.3 10551.3 8777.6 8564.9 8236.8 TRUE FALSE 10594.41973 10430.77076 10004.47386 10516.99429 10401.1146 9807.855804 9847.442029 8700.858369 9455.252005 9257.236969 1.144447287 1.126769337 1.080719214 1.136083512 1.123565772 1.059479825 1.063756071 0.939897984 1.021390296 1 13.17636594 -7.271111402 1.517860095 0.987117517 1.120794214 0.776291961 0.030083014 0.1774706 0.797147027 0.016972159 0.010046418 5.36E-08 7.271111402 0.133676697 ADTSQEICS(ph)PR ddPTM_A459_MK2206_30min_R2 1 ADTSQEICSPR 11 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;H7C3P6 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ADTSQEICS(1)PR 78.287 0.047867 5089500 27511 33635 24493 30130 28838 31878 31931 25635 27532 26298 TRUE FALSE 29617.26331 31964.73481 25309.5844 27668.28262 27705.67522 33091.13963 27738.42134 28985.58252 29926.68359 25439.89841 1.164205251 1.256480442 0.994877573 1.087594069 1.089063909 1.300757538 1.090351105 1.139374932 1.176368046 1 14.63480529 -10.64543626 4.001942527 0.999962946 1.142815238 0.21100141 0.083688308 11301097.66 10020561.65 3689.78383 0.020559306 2.26E-11 10.64543626 0.142852292 ADTSS(ph)QGALVFLSK ddPTM_A459_MK2206_30min_R2 2 ADTSSQGALVFLSK 14 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 ADT(0.057)S(0.057)S(0.886)QGALVFLSK;ADTS(0.001)S(0.999)QGALVFLSK 213.49 1.95E-06 5330900 29883 35689 33093 31386 36368 33980 38000 30752 24994 32914 TRUE FALSE 32170.86546 33916.73616 34196.3041 28821.6634 34940.00959 35273.13271 33010.55435 34771.39199 27167.93294 31840.01888 1.010390904 1.065223494 1.074003889 0.90520246 1.09736146 1.107823863 1.036763027 1.092065684 0.85326372 1 14.95855357 -8.252782531 24.99735885 0.926631856 1.048429419 0.363808258 0.064517466 597.947381 1726634.671 0.04437911 0.016193067 5.59E-09 8.252782531 0.121797563 ADVEAS(ph)PGNPPDR ddPTM_A459_MK2206_30min_R1 2 ADVEASPGNPPDR 13 0 Q9NW97 Q9NW97 TMEM51 Transmembrane protein 51 1 ADVEAS(1)PGNPPDR;ADVEAS(1)PGNPPDR 118.52 0.0034072 6835000 6141.6 6614 4760.1 4252.8 4303.1 4042.5 6007 5957.3 3365.4 5462.3 TRUE FALSE 5619.224669 6183.427398 4436.997674 4580.351393 4131.698415 4271.382857 5606.28399 5905.215954 3715.245373 6139.010962 0.915330613 1.007235113 0.72275448 0.746105752 0.673023463 0.695777037 0.913222671 0.961916503 0.605186307 1 12.58379053 -5.258493038 24.9748661 0.78371443 0.961282872 0.230131743 0.125107688 352.4731262 2987723.671 0.032317374 0.078182393 5.51E-06 5.258493038 0.177568442 ADVGRLS(ph)PEVK ddPTM_A459_MK2206_30min_R2 1 ADVGRLSPEVK 11 1 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 1 ADVGRLS(1)PEVK 63.212 0.047992 21370000 141440 106380 120940 115000 101080 81099 130440 103920 70654 125310 TRUE FALSE 152268.7551 101097.3239 124972.0792 105604.1321 97111.09131 84185.27927 113313.0713 117502.7008 76799.35721 121221.145 1.256123717 0.833990835 1.030942904 0.871169235 0.801106864 0.694476853 0.934763249 0.969325119 0.633547532 1 16.88728185 -2.411533699 1.282280974 0.852428494 199.9999999 0.457707724 0.124999143 666.008116 2.874762462 0.035459073 388198.7132 0.003876737 2.411533699 199.1475714 ADVLEAHEAEAEEPEAGKS(ph)EAEDDEDEVDDLPSSR ddPTM_A459_MK2206_30min_R1 1 ADVLEAHEAEAEEPEAGKSEAEDDEDEVDDLPSSR 35 1 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0;A8MY87 KSR1 Kinase suppressor of Ras 1 1 ADVLEAHEAEAEEPEAGKS(1)EAEDDEDEVDDLPSSR 91.555 1.63E-09 14694000 3835.8 4955.5 5311.3 4365.3 3506.8 3133 3895.8 3730.7 4311.2 4127.4 TRUE FALSE 3509.545067 4632.896049 4950.783754 4701.516162 3367.11673 3310.387753 3635.91829 3698.082883 4759.364668 4638.733472 0.756573985 0.998741591 1.067270578 1.013534447 0.725869841 0.713640431 0.783817029 0.797218229 1.026005201 1 12.17951524 -4.718652518 23.18056841 0.889988803 0.756570221 0.096154708 0.129242045 12165.42467 6589689.064 0.035844958 13.98771714 1.91E-05 4.718652518 -0.133418583 ADVLEAHEAEAEEPEAGKS(ph)EAEDDEDEVDDLPSSR ddPTM_A459_MK2206_30min_R2 2 ADVLEAHEAEAEEPEAGKSEAEDDEDEVDDLPSSR 35 1 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0;A8MY87 KSR1 Kinase suppressor of Ras 1 1 ADVLEAHEAEAEEPEAGKS(1)EAEDDEDEVDDLPSSR;ADVLEAHEAEAEEPEAGKS(1)EAEDDEDEVDDLPSSR 87.155 4.15E-09 31602000 163368 157141 151975 158182 144921 103686 169723 128559 112799 172868 TRUE FALSE 175875.5797 149337.6064 157041.7706 145258.0246 139230.6734 107631.8434 147438.1662 145362.1027 122610.0531 167227.3313 1.05171552 0.893021525 0.939091531 0.8686261 0.83258324 0.643625911 0.881663093 0.869248475 0.733193863 1 17.35145113 -4.671504571 0.792470416 0.818896221 1.186927788 0.319871747 0.092831755 3.523582991 1.505995768 0.035250298 1.194960458 2.13E-05 4.671504571 0.368031567 ADVTPPPDGSTTHNLEVS(ph)PK ddPTM_A459_MK2206_30min_R2 2 ADVTPPPDGSTTHNLEVSPK 20 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 ADVTPPPDGSTTHNLEVS(1)PK;ADVTPPPDGSTTHNLEVS(1)PK 107.88 0.00028932 23662000 95501 107940 103794 97291 115672 80297 132090 83597 85127 121072 TRUE FALSE 102812.63 102579.8566 107254.4402 89342.01408 111130.1361 83352.7586 114746.4243 94523.41493 92531.19259 117121.4306 0.877829356 0.875841902 0.915754185 0.762815256 0.948845447 0.711678112 0.979721848 0.807054819 0.790044932 1 16.83764555 -10.69257452 3.969707294 1.000068041 0.853249093 0.233555806 0.080314899 16474704.29 8875067.619 9916.818442 0.017960995 2.03E-11 10.69257452 -0.146818948 ADVVPQQADPEFPRAS(ph)PR ddPTM_A459_MK2206_30min_R1 2 ADVVPQQADPEFPRASPR 18 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR 147.78 0.00011607 92290000 10952.2 11683.9 10924.9 10470.2 11826.5 11450.3 11350.5 10427.6 9155.4 6491.7 TRUE FALSE 10020.65788 10923.27599 10183.34823 11276.61662 11355.42546 12098.60609 10593.32886 10336.43259 10107.13659 7295.940806 1.373456576 1.497171685 1.395755324 1.54560144 1.556403179 1.658265385 1.451948301 1.416737453 1.385309566 1 12.83287831 -8.898265102 1.082315414 1.000413632 1.50097494 0.777736017 0.078584429 0.618638394 1.188780724 0.080850022 0.025353082 1.26E-09 8.898265102 0.500561308 ADVVPQQADPEFPRAS(ph)PR ddPTM_A459_MK2206_30min_R2 4 ADVVPQQADPEFPRASPR 18 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR 119.04 0.00054108 178369000 351803 614820 471674 618430 611740 605590 596940 453919 586320 536667 TRUE FALSE 378737.3082 584288.9328 487399.3757 567902.2907 587720.0139 628636.1518 518561.0609 513247.7718 637317.0538 519155.5997 0.729525615 1.125460138 0.938831009 1.093896109 1.132069102 1.210881963 0.998854797 0.988620314 1.227603158 1 18.98580748 -4.756734293 24.99753701 1.078493856 0.729525087 0.564249874 0.092282295 108.2653351 575131.5148 0.022861913 0.180428253 1.75E-05 4.756734293 -0.348968768 ADYDTLS(ph)LR ddPTM_A459_MK2206_30min_R1 4 ADYDTLSLR 9 0 Q9Y446;Q9Y446-2;E9PKC4;E9PK71;E9PJR7;E9PRW6;E9PQ15 Q9Y446 PKP3 Plakophilin-3 1 ADYDTLS(1)LR;ADYDTLS(1)LR;ADYDTLS(1)LR;ADYDTLS(1)LR 129 0.0041885 53320700 15908.3 15005.2 15018.5 14646.7 17446.9 14508 16993.3 15363.6 13811.7 11208.7 TRUE FALSE 14555.21555 14028.35875 13999.08606 15774.79137 16751.95303 15329.43042 15859.70796 15229.27766 15247.47564 12597.31838 1.155421742 1.11359881 1.111275086 1.252234079 1.3298031 1.216880447 1.258974925 1.208930124 1.210374715 1 13.62082904 -5.757610314 24.99503821 1.226924202 1.125448553 0.166662294 0.081046131 134.2126104 876084.1046 0.021099449 0.034845459 1.75E-06 5.757610314 -0.101475649 ADYDTLS(ph)LR ddPTM_A459_MK2206_30min_R2 4 ADYDTLSLR 9 0 Q9Y446;Q9Y446-2;E9PKC4;E9PK71;E9PJR7;E9PRW6;E9PQ15 Q9Y446 PKP3 Plakophilin-3 1 ADYDTLS(1)LR;ADYDTLS(1)LR;ADYDTLS(1)LR;ADYDTLS(1)LR 120.63 0.0065183 31725600 114878 141761 143598 126320 126381 132956 127206 88558 111822 106333 TRUE FALSE 123673.148 134721.3549 148385.4856 115999.2519 121418.6469 138015.7337 110503.6994 100132.8347 121548.0754 102863.3629 1.202305121 1.309711748 1.442549431 1.127702309 1.180387686 1.341738495 1.074276557 0.973454803 1.181645943 1 16.6503697 -7.330290476 6.813080922 1.05323067 1.266780139 0.526456937 0.097628403 0.216338356 18.06841436 0.042102293 0.028282459 4.67E-08 7.330290476 0.213549468 AEADKIYSFTDNAPS(ph)PSIGGSSR ddPTM_A459_MK2206_30min_R1 1 AEADKIYSFTDNAPSPSIGGSSR 23 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 AEADKIYSFTDNAPS(0.935)PS(0.064)IGGS(0.001)SR 160.33 6.17E-10 12113000 4367.1 3787.9 3646.3 3733.3 4456.1 3499.2 3415.9 3539.2 2525.9 1986.3 TRUE FALSE 3995.655212 3541.307022 3398.799315 4020.839413 4278.604101 3697.32168 3188.031544 3508.257148 2788.476344 2232.37784 1.789865112 1.586338548 1.522501816 1.801146446 1.916612871 1.656225758 1.428087794 1.571533763 1.249105906 1 11.12436551 -8.322052052 0.876974276 1.000271251 1.705994016 0.770697002 0.124566344 0.290441304 0.484799907 0.128854917 0.046893586 4.76E-09 8.322052052 0.705722765 AEADKIYSFTDNAPS(ph)PSIGGSSR ddPTM_A459_MK2206_30min_R2 2 AEADKIYSFTDNAPSPSIGGSSR 23 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 AEADKIYSFTDNAPS(0.974)PS(0.025)IGGSSR;AEADKIYSFTDNAPS(0.958)PS(0.041)IGGSSR 152.26 2.61E-08 37168000 79255 123718 98659 131547 131869 109782 122019 84688 113898 102985 TRUE FALSE 85322.82374 117574.344 101948.2418 120799.1893 126691.1605 113959.8309 105997.7587 95757.01238 123804.6422 99624.60788 0.856443258 1.180173719 1.023323895 1.212543686 1.271685411 1.143892391 1.063971653 0.961178311 1.242711462 1 16.60421452 -4.754068368 24.99158648 1.124219907 0.856442784 0.381579032 0.101453573 288.6616675 978631.423 0.025609525 0.259639214 1.76E-05 4.754068368 -0.267777123 AEADKIYSFTDNAPSPS(ph)IGGSSR ddPTM_A459_MK2206_30min_R1 1 AEADKIYSFTDNAPSPSIGGSSR 23 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 AEADKIYSFTDNAPS(0.356)PS(0.642)IGGS(0.001)S(0.001)R 173.49 4.32E-13 10200000 4331.7 3263.4 3678.7 3260.3 3750.2 3258.7 3042.5 3588.2 2047.8 1631.4 TRUE FALSE 3963.266168 3050.952067 3429.000093 3511.408871 3600.821593 3443.204778 2839.540376 3556.828746 2260.676138 1833.510148 2.161573074 1.663995189 1.870183318 1.915129226 1.963895098 1.877930581 1.548690842 1.939901314 1.232977161 1 10.84039254 -8.383173803 3.439025214 1.006208559 1.856782694 0.783143076 0.159722405 0.100593774 2.080626123 0.148574052 0.03969605 4.14E-09 8.383173803 0.850574135 AEAES(ph)DALPDDTVIESEALPSDIAAEAR ddPTM_A459_MK2206_30min_R1 2 AEAESDALPDDTVIESEALPSDIAAEAR 28 0 G3V529;Q9GZR7-2;Q9GZR7;A0A1W2PRR2;F5GYL3 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AEAES(1)DALPDDTVIESEALPSDIAAEAR;AEAES(0.999)DALPDDT(0.001)VIESEALPSDIAAEAR 121.91 2.59E-12 3731200 1607.74 1997.39 1576.39 1376.67 1684.28 1413.89 1748.69 1849.04 1568.76 1173.43 TRUE FALSE 1470.99327 1867.359548 1469.389039 1482.701362 1617.191561 1493.94323 1632.038081 1832.874038 1731.838216 1318.803367 1.115399996 1.415949939 1.114183566 1.12427781 1.226256773 1.132802104 1.237514342 1.389800848 1.313189107 1 10.36501376 -7.519336104 24.99401149 1.273628497 1.193233125 0.003190952 0.12701989 418.2977429 2951239.04 0.056473888 0.033504326 3.02E-08 7.519336104 -0.080395372 AEAESPGGASES(ph)DQDGGHESPPK ddPTM_A459_MK2206_30min_R2 1 AEAESPGGASESDQDGGHESPPK 23 0 Q86V59-2;Q86V59 Q86V59-2 PNMAL1 PNMA-like protein 1 1 AEAES(0.003)PGGAS(0.035)ES(0.934)DQDGGHES(0.028)PPK 70.449 0.0089755 0 5293.9 6811.1 5786.5 6765.6 8219.5 7518.8 7779.5 6183.2 7546.9 5831 TRUE FALSE 5699.205054 6472.870678 5979.419022 6212.828838 7896.76113 7804.933203 6758.042305 6991.36547 8203.31572 5640.734948 1.010365689 1.147522573 1.060042544 1.101421871 1.399952525 1.383673098 1.19807833 1.239442295 1.454299093 1 12.46166743 -6.162495054 6.907665754 1.292027145 1.080961288 0.381832678 0.12380719 0.258250251 15.57950194 0.035210183 0.045630591 6.88E-07 6.162495054 -0.211065857 AEAGAGS(ph)ATEFQFR ddPTM_A459_MK2206_30min_R1 2 AEAGAGSATEFQFR 14 0 P46783;Q9NQ39 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 1 AEAGAGS(0.998)AT(0.002)EFQFR;AEAGAGS(0.985)AT(0.015)EFQFR 246.77 2.81E-27 46864000 3756.3 3158.14 3631.24 3247.07 3701.29 3674.1 4236.3 3266.42 4127.6 3946.8 TRUE FALSE 3436.80696 2952.544512 3384.761546 3497.159894 3553.859782 3882.124367 3953.704157 3237.862034 4556.678791 4435.759381 0.774795625 0.665623236 0.763062478 0.788401623 0.801184076 0.875188222 0.891325209 0.729945373 1.027260137 1 12.11496539 -7.140744905 0.230204315 1.03914033 0.636482319 0.595083033 0.069911227 2.29477014 0.359074107 0.175861372 0.323758946 7.23E-08 7.140744905 -0.402658011 AEAGAGS(ph)ATEFQFR ddPTM_A459_MK2206_30min_R2 3 AEAGAGSATEFQFR 14 0 P46783;Q9NQ39 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 1 AEAGAGS(0.993)AT(0.007)EFQFR;AEAGAGS(0.99)AT(0.01)EFQFR;AEAGAGS(0.917)AT(0.083)EFQFR 188.92 9.49E-05 43848400 83541 83470.7 71217.3 80690.8 82861.2 65709.6 95532.2 74732.6 66603.8 81869 TRUE FALSE 89936.96319 79325.66642 73591.64924 74098.10352 79607.65294 68210.22487 82988.70739 84500.40742 72396.87813 79197.62123 1.135601825 1.001616781 0.929215399 0.935610216 1.005177324 0.861266081 1.047868687 1.066956382 0.914129452 1 16.27316948 -4.783607821 3.682209596 0.970993759 1.153005557 0.408181603 0.059548477 0.267971799 6.285415673 0.01521434 0.133755709 1.65E-05 4.783607821 0.182011798 AEAPAGPALGLPS(ph)PEAESGVDR ddPTM_A459_MK2206_30min_R1 4 AEAPAGPALGLPSPEAESGVDR 22 0 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 AEAPAGPALGLPS(0.997)PEAES(0.003)GVDR;AEAPAGPALGLPS(0.886)PEAES(0.114)GVDR;AEAPAGPALGLPS(0.997)PEAES(0.003)GVDR;AEAPAGPALGLPS(0.984)PEAES(0.016)GVDR 212.06 1.15E-23 166964000 7857.9 6894.9 6482.2 4938.85 6062.8 5941.9 8489.8 5623.58 7796.9 9503.9 TRUE FALSE 7189.544342 6446.040757 6042.206324 5319.241083 5821.305838 6278.325243 7923.460933 5574.413633 8607.415656 10681.31488 0.67309544 0.603487569 0.565680011 0.49799497 0.544998991 0.587785803 0.741805763 0.52188459 0.805838584 1 13.38280164 -8.50529779 3.428604451 0.999161257 0.592261009 0.786169021 0.068471426 0.092982304 2.708179162 0.068401298 0.018087686 3.12E-09 8.50529779 -0.406900248 AEAPAGPALGLPS(ph)PEAESGVDR ddPTM_A459_MK2206_30min_R2 6 AEAPAGPALGLPSPEAESGVDR 22 0 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 AEAPAGPALGLPS(0.513)PEAES(0.487)GVDR;AEAPAGPALGLPS(0.992)PEAES(0.008)GVDR;AEAPAGPALGLPS(0.975)PEAES(0.025)GVDR;AEAPAGPALGLPS(0.998)PEAES(0.002)GVDR;AEAPAGPALGLPS(0.999)PEAES(0.001)GVDR;AEAPAGPALGLPS(1)PEAESGVDR 236.6 2.02E-36 145114000 118103.8 100177.8 108824.5 105582.3 87423.2 102040.6 108848.4 92741.5 83364 105065.9 TRUE FALSE 127145.9177 95203.11612 112452.6545 96955.88835 83990.5259 105923.8265 94556.47433 104863.1325 90614.85003 101637.6083 1.250973138 0.936691818 1.106407917 0.95393713 0.826372514 1.042171577 0.930329589 1.031735538 0.891548429 1 16.63307481 -2.728018109 1.5871424 0.966052112 199.9971204 0.524789026 0.078567981 777.1173421 3.670309102 0.021525332 561541.656 0.001870604 2.728018109 199.0310683 AEAPAGPALGLPS(ph)PEAESGVDRGEPEPMEVEEGELEIVPVRR ddPTM_A459_MK2206_30min_R1 3 AEAPAGPALGLPSPEAESGVDRGEPEPMEVEEGELEIVPVRR 42 2 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 AEAPAGPALGLPS(0.5)PEAES(0.5)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.788)PEAES(0.212)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.5)PEAES(0.5)GVDRGEPEPMEVEEGELEIVPVRR 64.347 7.33E-07 23397500 1307.77 1012.24 1349.7 1442.01 1528.7 1103.49 1181.7 1398.34 888.51 596.93 TRUE FALSE 1196.537294 946.342992 1258.086124 1553.07386 1467.808642 1165.96865 1102.870949 1386.114461 980.8737941 670.882195 1.783528171 1.410594884 1.875271298 2.314972542 2.187878368 1.737963325 1.643911491 2.066107092 1.462065623 1 9.389915645 -8.532739984 3.96077479 1.001070112 1.872477029 0.552027308 0.250400004 0.155077073 7.441412386 0.266157417 0.069791211 2.93E-09 8.532739984 0.871406917 AEAPAGPALGLPS(ph)PEAESGVDRGEPEPMEVEEGELEIVPVRR ddPTM_A459_MK2206_30min_R2 2 AEAPAGPALGLPSPEAESGVDRGEPEPMEVEEGELEIVPVRR 42 2 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 AEAPAGPALGLPS(0.523)PEAES(0.477)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.78)PEAES(0.22)GVDRGEPEPMEVEEGELEIVPVRR 65.375 5.89E-08 20482300 16278.9 35050.2 28538.1 33534.5 35073 36829 35605 23871.7 30974.7 29961.7 TRUE FALSE 17525.2251 33309.65804 29489.54601 30794.62408 33695.85779 38230.5534 30930.02073 26991.81315 33668.82342 28984.05218 0.604650619 1.149240894 1.017440413 1.062467866 1.162565454 1.319020307 1.067139285 0.931264303 1.161632721 1 14.82297169 -4.757906364 24.99999556 1.099131623 0.604649925 0.673067743 0.102878552 63.04400447 446037.9837 0.026852871 0.191871637 1.75E-05 4.757906364 -0.494481698 AEAPAGPALGLPSPEAES(ph)GVDRGEPEPMEVEEGELEIVPVRR ddPTM_A459_MK2206_30min_R1 3 AEAPAGPALGLPSPEAESGVDRGEPEPMEVEEGELEIVPVRR 42 2 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 AEAPAGPALGLPS(0.199)PEAES(0.801)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.089)PEAES(0.911)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.185)PEAES(0.815)GVDRGEPEPMEVEEGELEIVPVRR 86.573 4.11E-12 123257400 4418.8 3784.57 4222.81 4148.43 5380.46 4020.06 3978.38 4281.32 2608.91 2061.98 TRUE FALSE 4042.957856 3538.193805 3936.177423 4467.942797 5166.144885 4247.672323 3712.989529 4243.888871 2880.115531 2317.43365 1.744584082 1.52677243 1.698507063 1.927970105 2.229252555 1.832920793 1.60219885 1.831288189 1.24280388 1 11.17831232 -8.388762713 2.870724002 1.001712528 1.803479038 0.693490287 0.183146878 0.155478062 2.42335275 0.195715221 0.053138537 4.09E-09 8.388762713 0.80176651 AEAPLPS(ph)PK ddPTM_A459_MK2206_30min_R1 2 AEAPLPSPK 9 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 AEAPLPS(1)PK;AEAPLPS(1)PK 109.72 0.011267 222959000 28826 33497 29834 25641.8 15774.5 11618.4 14212.6 15726.9 18251.9 17988.4 TRUE FALSE 26374.19733 31316.33921 27808.9512 27616.73588 15146.16826 12276.22377 13264.50339 15589.40137 20149.25032 20216.9388 1.304559389 1.549014889 1.375527298 1.366019661 0.74918208 0.607224659 0.656108401 0.771105929 0.996651893 1 14.30327694 -6.243487087 5.859320823 0.767621898 1.411743203 0.829450923 0.133367558 0.065544265 8.540984144 0.041202101 0.051476976 5.71E-07 6.243487087 0.644121305 AEAPLPS(ph)PK ddPTM_A459_MK2206_30min_R2 4 AEAPLPSPK 9 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 AEAPLPS(1)PK;AEAPLPS(1)PK;AEAPLPS(1)PK;AEAPLPS(1)PK 97.911 0.020169 543410000 1656760 1401530 1357900 1013681 1045983 659125 1033420 777370 760786 957306 TRUE FALSE 1783602.819 1331932.058 1403171.708 930860.0197 1004912.452 684208.4637 897730.7126 878974.9281 826957.7911 926069.1836 1.925993059 1.438264097 1.515191017 1.005173303 1.085137557 0.73883083 0.969399186 0.949146072 0.892976255 1 19.82076045 -5.208676843 0.818349982 0.90379173 2.08590747 0.871232559 0.122970621 0.470549882 0.367710013 0.047382833 0.450372438 6.18E-06 5.208676843 1.182115739 AEAPPLEREDS(ph)GTFSLGK ddPTM_A459_MK2206_30min_R1 3 AEAPPLEREDSGTFSLGK 18 1 G5E9Q4;O75569 G5E9Q4 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A 1 AEAPPLEREDS(0.87)GT(0.1)FS(0.029)LGK;AEAPPLEREDS(0.694)GT(0.233)FS(0.073)LGK;AEAPPLEREDS(0.77)GT(0.173)FS(0.057)LGK 76.015 0.0082239 63399200 10425.82 8534.41 10390.09 10240.64 11606.28 8160.27 8726.03 9297.59 7927.11 5358.27 TRUE FALSE 9539.049261 7978.818358 9684.839639 11029.37587 11143.97729 8622.297435 8143.93246 9216.302151 8751.161452 6022.09294 1.584008974 1.32492448 1.608218228 1.831485495 1.85051566 1.431777543 1.35234254 1.53041513 1.453176087 1 12.55604926 -9.199866067 0.527769748 0.968276532 1.603417532 0.537099362 0.161238432 2.231923286 0.972338825 0.348869473 0.088333512 6.31E-10 9.199866067 0.635141001 AEAPPLEREDS(ph)GTFSLGK ddPTM_A459_MK2206_30min_R2 5 AEAPPLEREDSGTFSLGK 18 1 G5E9Q4;O75569 G5E9Q4 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A 1 AEAPPLEREDS(0.86)GT(0.107)FS(0.033)LGK;AEAPPLEREDS(0.484)GT(0.162)FS(0.354)LGK;AEAPPLEREDS(0.991)GT(0.009)FSLGK;AEAPPLEREDS(0.745)GT(0.251)FS(0.004)LGK;AEAPPLEREDS(0.954)GT(0.044)FS(0.002)LGK 117.65 0.002012 52960200 72248.9 162033 122745 113076 139126 135337 133871 96777 120888 86526 TRUE FALSE 77780.33133 153986.6768 126837.257 103837.3291 133663.2142 140487.3444 116293.5769 109426.0862 131402.6197 83702.66371 0.929245593 1.839686696 1.51533119 1.240549876 1.596881249 1.678409481 1.389365305 1.307319043 1.569873812 1 16.35298591 -11.17931375 6.864494917 0.997968183 1.46375087 0.237896422 0.241779047 0.007179661 0.000359338 0.223560223 0.054040585 6.62E-12 11.17931375 0.465782687 AEAPS(ph)SPDVAPAGKEDSPSASGR ddPTM_A459_MK2206_30min_R1 2 AEAPSSPDVAPAGKEDSPSASGR 23 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 AEAPS(0.5)S(0.5)PDVAPAGKEDSPSASGR;AEAPS(0.5)S(0.5)PDVAPAGKEDSPSASGR 116.92 5.93E-06 11665900 3731.2 4053.8 4604.1 3578.2 3865.5 3639.6 3611.3 3488.6 3375 3566.9 TRUE FALSE 3413.841847 3789.896883 4291.58652 3853.793584 3711.52895 3845.671007 3370.396766 3458.099538 3725.843328 4008.794501 0.851588139 0.94539565 1.070542907 0.961334781 0.925846648 0.959308592 0.840750696 0.862628288 0.929417391 1 11.96895275 -7.211619995 24.82716282 0.896751408 0.95659867 0.089465239 0.064139907 644.9562642 321409.8379 0.02513602 0.019470261 6.14E-08 7.211619995 0.059847261 AEAPSS(ph)PDVAPAGK ddPTM_A459_MK2206_30min_R1 5 AEAPSSPDVAPAGK 14 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 AEAPS(0.022)S(0.978)PDVAPAGK;AEAPS(0.165)S(0.835)PDVAPAGK;AEAPS(0.001)S(0.999)PDVAPAGK;AEAPS(0.021)S(0.979)PDVAPAGK;AEAPS(0.225)S(0.775)PDVAPAGK 261.45 6.96E-36 109741300 32515.6 36552.6 35130.4 23054.4 26414.4 29695.6 39104.2 25204.8 42369 46815.7 TRUE FALSE 29749.97747 34173.0191 32745.84633 24830.05388 25362.25851 31376.93921 36495.63017 24984.43709 46773.40917 52615.58236 0.565421423 0.649484764 0.622360237 0.471914455 0.482029417 0.596343095 0.693627791 0.474848628 0.888964962 1 15.6832025 -8.399064664 4.321725149 0.994603905 0.573420039 0.81135456 0.073015616 0.09069371 2.568015633 0.073243588 0.019211958 3.99E-09 8.399064664 -0.421183866 AEAPSS(ph)PDVAPAGK ddPTM_A459_MK2206_30min_R2 3 AEAPSSPDVAPAGK 14 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 AEAPS(0.022)S(0.978)PDVAPAGK;AEAPS(0.027)S(0.973)PDVAPAGK;AEAPS(0.123)S(0.877)PDVAPAGK 241.76 1.13E-52 145484000 1568550 1302000 1340930 1423840 1177800 1024350 1370110 1153860 908810 1452820 TRUE FALSE 1688639.394 1237344.573 1385635.937 1307507.717 1131553.654 1063332.357 1190212.911 1304673.464 987856.651 1405414.602 1.201524014 0.880412493 0.985926811 0.930335942 0.805138677 0.756596918 0.846876722 0.928319274 0.702893402 1 20.42256436 -1.522878747 0.778828871 0.844797926 71.92092687 0.531490626 0.09221354 343.2244127 1.310097349 0.032746605 42946.9412 0.03 1.522878747 71.07612895 AEAPSS(ph)PDVAPAGKEDS(ph)PSASGR ddPTM_A459_MK2206_30min_R2 2 AEAPSSPDVAPAGKEDSPSASGR 23 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 2 AEAPS(0.282)S(0.718)PDVAPAGKEDS(0.856)PS(0.135)AS(0.009)GR;AEAPS(0.447)S(0.553)PDVAPAGKEDS(0.792)PS(0.179)AS(0.029)GR 105.75 4.15E-05 40519000 65273 82805 72313 86920 80944 59323 82254 69084 63998 75125 TRUE FALSE 70270.35107 78693.02411 74723.87933 79818.35796 77765.73185 61580.57833 71453.951 78113.516 69564.43036 72673.6774 0.966929892 1.082827055 1.028211066 1.098311807 1.070067384 0.8473574 0.983216393 1.074852943 0.957216324 1 16.14914529 AEAS(ph)SPVPY(ph)LSPETNPASSTSAVNHNVNLTNVR ddPTM_A459_MK2206_30min_R2 1 AEASSPVPYLSPETNPASSTSAVNHNVNLTNVR 33 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 2 AEAS(0.541)S(0.454)PVPY(0.341)LS(0.325)PET(0.325)NPAS(0.01)S(0.003)T(0.001)SAVNHNVNLTNVR 87.017 3.61E-07 5606000 4478.5 11482 10174 13121 13336 16022 15149 10843 13877 13288 TRUE FALSE 4821.377403 10911.82058 10513.19608 12048.97233 12812.36163 16631.72844 13159.9181 12260.21733 15083.99638 12854.41365 0.375075638 0.848877349 0.817866639 0.937341263 0.996728593 1.293853527 1.023766503 0.953774918 1.173448808 1 13.64997618 -4.658604833 0.799308204 1.074669585 2.15E-11 0.761977583 0.112957528 1.535865508 0.658823867 0.043698258 1.539543351 2.19E-05 4.658604833 -1.074669585 down AEASS(ph)PVPY(ph)LSPETNPASSTSAVNHNVNLTNVR ddPTM_A459_MK2206_30min_R1 1 AEASSPVPYLSPETNPASSTSAVNHNVNLTNVR 33 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 2 AEAS(0.185)S(0.785)PVPY(0.737)LS(0.251)PET(0.042)NPAS(0.001)STSAVNHNVNLTNVR 120.34 1.40E-17 8028400 734.37 430.26 455.01 351.85 534.22 626.4 851.66 627.44 404.99 384.02 TRUE FALSE 671.9079752 402.2499958 424.1251889 378.949548 512.9408862 661.8662267 794.8473153 621.9543582 447.0901598 431.5952968 1.556800966 0.932007366 0.982691869 0.878020569 1.188476543 1.533534382 1.841649622 1.441059165 1.035901371 1 8.753535333 -6.586848 5.393332945 1.424972688 1.064409999 0.166023363 0.286311074 0.290331105 16.43566922 0.097407925 0.097853271 2.59E-07 6.586848 -0.360562688 AEASS(ph)PVPY(ph)LSPETNPASSTSAVNHNVNLTNVR ddPTM_A459_MK2206_30min_R2 1 AEASSPVPYLSPETNPASSTSAVNHNVNLTNVR 33 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 2 AEAS(0.164)S(0.833)PVPY(0.515)LS(0.272)PET(0.213)NPAS(0.002)STSAVNHNVNLTNVR 111.23 5.60E-13 6526600 10795 24132 16092 27472 29745 27246 23810 19348 24898 20526 TRUE FALSE 11621.4735 22933.63997 16628.49925 25227.44972 28577.06184 28282.86562 20683.7184 21876.85003 27063.58303 19856.2383 0.585280723 1.154984123 0.837444585 1.270504984 1.439198171 1.424381859 1.041673558 1.101762061 1.362976341 1 14.27730471 -4.451884922 0.977735288 1.229804282 1.70E-16 0.476064619 0.186525344 3.191367958 1.583052435 0.063133331 4.820286659 3.53E-05 4.451884922 -1.229804282 AEASS(ph)PVPYLS(ph)PETNPASSTSAVNHNVNLTNVR ddPTM_A459_MK2206_30min_R1 2 AEASSPVPYLSPETNPASSTSAVNHNVNLTNVR 33 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 2 AEAS(0.183)S(0.761)PVPY(0.375)LS(0.589)PET(0.092)NPASSTSAVNHNVNLTNVR;AEAS(0.137)S(0.833)PVPY(0.142)LS(0.577)PET(0.312)NPASSTSAVNHNVNLTNVR 164.69 1.28E-30 17532300 3084.87 1641.12 2014.33 1497.26 3642.75 3003.54 3525.33 2857.51 2023.19 1730.4 TRUE FALSE 2822.485607 1534.28279 1877.602892 1612.579225 3497.651554 3173.597839 3290.161668 2832.527091 2233.507841 1944.775016 1.451317291 0.788925597 0.965460208 0.82918549 1.79848647 1.631858602 1.691795525 1.456480605 1.148465927 1 10.92538755 -6.251637177 24.99909973 1.49806981 0.989932243 0.367918144 0.282386916 669.8370511 1708322.162 0.082984337 0.105797921 5.60E-07 6.251637177 -0.508137567 AEASS(ph)PVPYLSPETNPASSTSAVNHNVNLTNVR ddPTM_A459_MK2206_30min_R1 4 AEASSPVPYLSPETNPASSTSAVNHNVNLTNVR 33 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 AEAS(0.248)S(0.733)PVPY(0.01)LS(0.004)PET(0.004)NPASSTSAVNHNVNLTNVR;AEAS(0.14)S(0.772)PVPY(0.033)LS(0.01)PET(0.045)NPASSTSAVNHNVNLTNVR;AEAS(0.16)S(0.84)PVPYLSPETNPASSTSAVNHNVNLTNVR;AEAS(0.157)S(0.514)PVPY(0.212)LS(0.051)PET(0.066)NPASSTSAVNHNVNLTNVR 209.5 7.69E-66 913652000 10023.89 6409.8 8030.2 5163.79 12811.1 10847.27 10539.04 9668.21 6559.1 6121.89 TRUE FALSE 9171.305518 5992.520855 7485.132397 5561.506001 12300.80676 11461.43305 9835.999871 9583.681859 7240.941917 6880.315951 1.332977378 0.870965941 1.08790533 0.80832131 1.787825857 1.665829467 1.429585493 1.392913048 1.052414158 1 12.7482591 -6.247521862 24.95875146 1.42370162 1.018527234 0.312375101 0.260619567 891.5734677 1598888.244 0.07766134 0.099733729 5.66E-07 6.247521862 -0.405174386 AEASS(ph)PVPYLSPETNPASSTSAVNHNVNLTNVR ddPTM_A459_MK2206_30min_R2 3 AEASSPVPYLSPETNPASSTSAVNHNVNLTNVR 33 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 AEAS(0.143)S(0.476)PVPY(0.342)LS(0.031)PET(0.008)NPASSTSAVNHNVNLTNVR;AEAS(0.213)S(0.722)PVPY(0.047)LS(0.018)PET(0.001)NPASSTSAVNHNVNLTNVR;AEAS(0.101)S(0.411)PVPY(0.38)LS(0.109)PETNPASSTSAVNHNVNLTNVR 165.64 6.50E-35 1028596000 146698 372237 243839 430054 411286 466490 417038 332894 412263 322916 TRUE FALSE 157929.3117 353752.2519 251968.4706 394917.2125 395136.8451 484242.6038 362280.4096 376404.3888 448120.8905 312379.2774 0.505569105 1.132444683 0.80661071 1.264223465 1.264926561 1.550175184 1.159745335 1.204959535 1.434541031 1 18.25293923 -4.560774068 0.772557445 1.286584809 2.26E-14 0.556982674 0.190988094 2.682598599 0.969445842 0.072088859 3.224637855 2.75E-05 4.560774068 -1.286584809 AEASSPVPY(ph)LSPETNPASSTSAVNHNVNLTNVR ddPTM_A459_MK2206_30min_R1 2 AEASSPVPYLSPETNPASSTSAVNHNVNLTNVR 33 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 AEAS(0.104)S(0.259)PVPY(0.373)LS(0.131)PET(0.131)NPAS(0.001)STSAVNHNVNLTNVR;AEAS(0.038)S(0.16)PVPY(0.456)LS(0.173)PET(0.173)NPASSTSAVNHNVNLTNVR 126.52 6.27E-24 453220000 5958.5 4874.1 5463.7 4671.6 7111.3 6537.5 6776.6 6039.8 4513.9 4358.8 TRUE FALSE 5451.698286 4556.795204 5092.839267 5031.407441 6828.041863 6907.6476 6324.545379 5986.994665 4983.136058 4898.801051 1.112863786 0.930185806 1.039609328 1.027069152 1.393818976 1.410069021 1.291039443 1.222134682 1.017215438 1 12.25821299 -6.204404336 12.71773676 1.246288717 1.021270409 0.325768985 0.134671188 1.853156823 411.7257651 0.040896757 0.052798325 6.25E-07 6.204404336 -0.225018308 AEASSPVPYLS(ph)PETNPASSTSAVNHNVNLTNVR ddPTM_A459_MK2206_30min_R1 1 AEASSPVPYLSPETNPASSTSAVNHNVNLTNVR 33 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 AEAS(0.046)S(0.17)PVPY(0.014)LS(0.385)PET(0.385)NPASSTSAVNHNVNLTNVR 111.18 2.51E-14 14899000 364.78 286.14 254.64 278.93 458.92 641.33 533.79 310.93 116.13 223.11 TRUE FALSE 333.7535455 267.512234 237.3557463 300.4132369 440.6402446 677.6415504 498.1818431 308.2115718 128.2021291 250.7505512 1.331018193 1.066846046 0.946581155 1.198056138 1.757285248 2.702452885 1.986762704 1.229156109 0.511273568 1 7.970109062 -6.162484861 5.357033661 1.622590992 1.10684966 0.093561331 0.563425478 0.49364881 21.43292814 0.184444122 0.240122413 6.88E-07 6.162484861 -0.515741332 AEASSPVPYLS(ph)PETNPASSTSAVNHNVNLTNVR ddPTM_A459_MK2206_30min_R2 3 AEASSPVPYLSPETNPASSTSAVNHNVNLTNVR 33 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 AEASS(0.001)PVPY(0.104)LS(0.447)PET(0.447)NPASSTSAVNHNVNLTNVR;AEASS(0.001)PVPY(0.026)LS(0.486)PET(0.486)NPASSTSAVNHNVNLTNVR;AEAS(0.05)S(0.169)PVPY(0.261)LS(0.426)PET(0.095)NPASSTSAVNHNVNLTNVR 151.35 1.88E-27 149720000 77383 136668 109796 178708 166894 188344 161106 123970 158196 134614 TRUE FALSE 83307.50198 129881.2659 113456.5438 164106.9847 160340.903 195511.5629 139952.5887 140173.3047 171955.6021 130221.5562 0.639736649 0.997386835 0.871257779 1.260213666 1.231293095 1.501376336 1.074726741 1.076421667 1.320484927 1 16.99060876 -5.188951653 1.150196231 1.218631701 0.63534199 0.534404362 0.158333447 0.70192249 1.233002379 0.051886063 0.417139195 6.47E-06 5.188951653 -0.583289711 AEASSPVPYLSPET(ph)NPASSTSAVNHNVNLTNVR ddPTM_A459_MK2206_30min_R1 1 AEASSPVPYLSPETNPASSTSAVNHNVNLTNVR 33 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 AEASSPVPY(0.015)LS(0.183)PET(0.802)NPASSTSAVNHNVNLTNVR 158.8 4.84E-30 11420000 1992.1 1295.9 1576.3 1252.5 2514.4 2164.1 2192.9 2047.5 1118 1117.8 TRUE FALSE 1822.661434 1211.536674 1469.305148 1348.967767 2414.246124 2286.629472 2046.615642 2029.598923 1234.220101 1256.281503 1.450838391 0.964383119 1.169566808 1.073778261 1.921739768 1.820156921 1.629105927 1.61556062 0.982439125 1 10.29494406 -6.227885202 24.86294371 1.548591631 1.150689192 0.199619165 0.312491179 821.8310885 608959.5524 0.092207068 0.11903141 5.92E-07 6.227885202 -0.397902439 AEASSPVPYLSPET(ph)NPASSTSAVNHNVNLTNVR ddPTM_A459_MK2206_30min_R2 1 AEASSPVPYLSPETNPASSTSAVNHNVNLTNVR 33 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 AEASSPVPY(0.002)LS(0.047)PET(0.951)NPASSTSAVNHNVNLTNVR 168.59 9.30E-35 3566500 5242.8 7929.6 6882.6 9613.5 12072 13104 10512 7677.9 10094 7052.7 TRUE FALSE 5644.192799 7535.827595 7112.062449 8828.046298 11597.99262 13602.6819 9131.761773 8681.427892 10971.95787 6822.570977 0.827282386 1.104543671 1.042431434 1.293947154 1.69994459 1.993776532 1.338463433 1.272456955 1.60818523 1 12.73609978 -5.894951215 3.013800552 1.516672413 0.994657492 0.416070247 0.259504347 0.248320822 4.523020696 0.079079355 0.125868732 1.27E-06 5.894951215 -0.522014921 AEDEALLS(ph)EEDDPIDR ddPTM_A459_MK2206_30min_R1 1 AEDEALLSEEDDPIDR 16 0 Q04721 Q04721 NOTCH2 Neurogenic locus notch homolog protein 2;Notch 2 extracellular truncation;Notch 2 intracellular domain 1 AEDEALLS(1)EEDDPIDR 130.02 0.00082191 6312200 1759.7 1593.9 1616.1 1690.3 1956.8 1498.8 1958.8 1694.6 1874.9 1785.4 TRUE FALSE 1610.028274 1490.13682 1506.403635 1820.487199 1878.856512 1583.660761 1828.132026 1679.784291 2069.802564 2006.588831 0.802370794 0.742621905 0.750728605 0.907254725 0.936343551 0.789230328 0.911064588 0.837134277 1.031503082 1 10.97052931 -4.747019011 0.151042438 1.054653158 0.488714162 0.542925478 0.065226341 20.39287338 0.52474352 0.323352351 2.319845524 1.79E-05 4.747019011 -0.565938996 AEDEALLS(ph)EEDDPIDR ddPTM_A459_MK2206_30min_R2 2 AEDEALLSEEDDPIDR 16 0 Q04721 Q04721 NOTCH2 Neurogenic locus notch homolog protein 2;Notch 2 extracellular truncation;Notch 2 intracellular domain 1 AEDEALLS(1)EEDDPIDR;AEDEALLS(1)EEDDPIDR 170.48 9.59E-06 8677100 34183 26573 27278 27922 26078 25092 32900 23291 25096 29492 TRUE FALSE 36800.07676 25253.42346 28187.43491 25640.68328 25054.04669 26046.89364 28580.19048 26335.21367 27278.80472 28529.67846 1.28988754 0.88516327 0.988003946 0.898737198 0.878174871 0.912975366 1.001770508 0.923081335 0.956155351 1 14.80017587 -4.756474594 24.99999461 0.935466514 1.289888083 0.850380215 0.044238066 54.20655938 272924.0158 0.010836234 0.087479762 1.75E-05 4.756474594 0.354421569 AEDEDIVLT(ph)PDGTR ddPTM_A459_MK2206_30min_R1 2 AEDEDIVLTPDGTR 14 0 F5GZI3;B1AP52;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 AEDEDIVLT(0.973)PDGT(0.027)R;AEDEDIVLT(0.697)PDGT(0.303)R 206.45 1.77E-05 27854000 5258.1 4717.7 4442.4 3541.5 4373.6 3902.1 4885.9 4121.3 5058 5186.7 TRUE FALSE 4810.870984 4410.576873 4140.862265 3814.266944 4199.390251 4123.03353 4559.970526 4085.267909 5583.7972 5829.267554 0.825295964 0.756626254 0.710357215 0.654330395 0.720397582 0.707298729 0.782254457 0.700820107 0.957890018 1 12.50909891 -8.315846265 4.948466879 0.991633052 0.72995454 0.82480522 0.045539748 0.086191299 4.461293738 0.044575155 0.011987563 4.83E-09 8.315846265 -0.261678512 AEDEDIVLT(ph)PDGTR ddPTM_A459_MK2206_30min_R2 2 AEDEDIVLTPDGTR 14 0 F5GZI3;B1AP52;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 AEDEDIVLT(0.991)PDGT(0.009)R;AEDEDIVLT(1)PDGTR 151.73 0.0009265 36687000 86563 81864 91383 95000 84204 85895 88700 70165 76495 83507 TRUE FALSE 93190.32984 77798.7528 94429.66361 87238.19611 80897.72787 89163.79441 77053.58345 79335.80641 83148.39683 80782.17343 1.15360018 0.963068329 1.168941854 1.079918903 1.001430445 1.103755824 0.953843901 0.982095468 1.029291406 1 16.30174934 -6.945503716 1.299859554 0.992508764 1.081985819 0.27397501 0.06316639 0.607877111 2.11569893 0.0325882 0.024876759 1.13E-07 6.945503716 0.089477055 AEDGAT(ph)PSPSNET(ph)PK ddPTM_A459_MK2206_30min_R2 1 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 AEDGAT(0.999)PS(0.001)PS(0.001)NET(0.998)PK 133.96 0.0051074 0 36355 20910 24185 23771 20136 18247 22288 17137 16105 29286 TRUE FALSE 39138.36675 19871.63981 24991.31583 21828.83326 19345.35946 18941.40237 19361.55883 19376.86474 17505.78379 28330.40022 1.381497136 0.701424606 0.882137761 0.770509174 0.682848082 0.668589297 0.683419884 0.683960148 0.61791516 1 14.79006336 -4.759767597 24.99940572 0.732621112 1.38149794 0.751562267 0.109899499 20.24442239 302638.3019 0.026601478 0.16507913 1.74E-05 4.759767597 0.648876828 AEDGATPS(ph)PSNETPK ddPTM_A459_MK2206_30min_R1 1 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPS(0.632)PS(0.184)NET(0.184)PK 236.31 9.54E-65 0 5608.3 6287.3 5752.6 5306.2 5425 4589.8 5184.2 5505 6365.3 5122.7 TRUE FALSE 5131.284635 5877.995627 5362.12954 5714.884443 5208.910762 4849.67051 4838.371477 5456.870365 7026.995713 5757.33875 0.891259809 1.020957057 0.931355575 0.992626054 0.904742797 0.842345868 0.840383324 0.947811237 1.220528445 1 12.49118638 -8.120181079 6.855414166 1.107996644 0.919834921 0.519261741 0.07309768 0.1946769 10.02319895 0.050741768 0.018910923 7.58E-09 8.120181079 -0.188161723 AEDGATPS(ph)PSNETPK ddPTM_A459_MK2206_30min_R2 4 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGAT(0.023)PS(0.782)PS(0.11)NET(0.085)PK;AEDGAT(0.004)PS(0.995)PS(0.001)NETPK;AEDGAT(0.011)PS(0.95)PS(0.039)NETPK;AEDGAT(0.028)PS(0.971)PS(0.001)NETPK 241.66 3.23E-20 277147000 1392534 1584906 1422131 1419053 1401887 1178436 1676043 1197833 1086439 1546004 TRUE FALSE 1499147.474 1506201.873 1469544.138 1303111.831 1346841.872 1223282.208 1455976.541 1354393.886 1180935.5 1495558.016 1.002400079 1.00711698 0.982605905 0.871321484 0.900561435 0.817943667 0.973533975 0.905611064 0.789628679 1 20.51225245 -5.679757567 4.995102552 0.890622179 1.001972047 0.390214388 0.059303224 0.199466522 8.672217636 0.015802881 0.027711145 2.09E-06 5.679757567 0.111349867 AEDGATPS(ph)PSNETPKK ddPTM_A459_MK2206_30min_R1 1 AEDGATPSPSNETPKK 16 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGAT(0.027)PS(0.613)PS(0.233)NET(0.127)PKK 94.673 0.016352 40971000 1098.8 1369.5 1584.9 1490.5 723.31 782.14 941.27 1107.1 1362.3 1509.5 TRUE FALSE 1005.34129 1280.345301 1477.321404 1605.298568 694.4990311 826.4240909 878.4795957 1097.420741 1503.91596 1696.508256 0.592594399 0.754694412 0.870801187 0.946236815 0.409369674 0.487132372 0.517816281 0.646870263 0.886477242 1 10.72835274 -8.398552893 3.321812927 0.994510524 0.655220557 0.356144002 0.159201323 0.295020145 5.836877441 0.171813337 0.045909899 3.99E-09 8.398552893 -0.339289967 AEDGATPS(ph)PSNETPKK ddPTM_A459_MK2206_30min_R2 2 AEDGATPSPSNETPKK 16 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGAT(0.008)PS(0.968)PS(0.015)NET(0.008)PKK;AEDGAT(0.018)PS(0.79)PS(0.142)NET(0.051)PKK 122.96 0.0025222 31064900 120412 154301 108684 132720 120063 88958 143806 109925 86551 139362 TRUE FALSE 129630.8353 146638.6367 112307.4703 121876.3514 115348.7234 92343.35903 124924.0995 124292.5749 94079.04953 134814.6294 0.961548727 1.08770567 0.833051063 0.904029125 0.855609839 0.684965419 0.926636078 0.921951687 0.697840064 1 17.04061753 -5.271271331 24.39454919 0.848765777 1.0246272 0.330409078 0.097573822 466.9258064 1158515.724 0.024719198 0.052506931 5.35E-06 5.271271331 0.175861422 AEDGATPSPS(ph)NETPK ddPTM_A459_MK2206_30min_R1 1 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPS(0.203)PS(0.555)NET(0.242)PK 219.53 2.42E-09 84715000 2086.6 2106.1 2249 1729.2 2107.7 1563.4 2050.3 2158.1 2122.5 2161.2 TRUE FALSE 1909.123713 1968.992507 2096.344146 1862.383284 2023.745846 1651.918357 1913.528228 2139.231959 2343.14147 2428.945772 0.785988611 0.810636668 0.863067496 0.766745518 0.833178686 0.680096845 0.787801955 0.880724462 0.964674262 1 11.24611457 -8.085428077 2.254845894 0.990743499 0.790036285 0.741638252 0.045674795 0.167631825 1.534121159 0.041236495 0.013146489 8.21E-09 8.085428077 -0.200707213 AEDGATPSPSNET(ph)PK ddPTM_A459_MK2206_30min_R1 6 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPSPSNET(0.999)PK;AEDGATPSPSNET(1)PK;AEDGATPSPS(0.019)NET(0.98)PK;AEDGATPSPS(0.001)NET(0.999)PK;AEDGATPSPS(0.001)NET(0.998)PK;AEDGAT(0.001)PS(0.006)PS(0.02)NET(0.973)PK 285.18 2.07E-55 585560000 33073.04 37536.93 37964.09 31478.29 21562.09 19613.27 25783.28 26198.11 34480.44 33165.36 TRUE FALSE 30260.00427 35093.26903 35387.19334 33902.75335 20703.2263 20723.7564 24063.32444 25969.06269 38064.80513 37274.13518 0.811823108 0.941491167 0.949376643 0.909551709 0.555431432 0.555982219 0.645577002 0.696704633 1.021212295 1 15.18588726 -6.215188816 22.34919996 0.71614935 0.909114401 0.181815233 0.155760073 183.6471229 88741.00307 0.046818324 0.060441587 6.09E-07 6.215188816 0.19296505 AEDGATPSPSNET(ph)PK ddPTM_A459_MK2206_30min_R2 10 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPSPS(0.001)NET(0.999)PK;AEDGATPSPSNET(1)PK;AEDGATPSPSNET(1)PK;AEDGATPSPSNET(1)PK;AEDGATPS(0.003)PS(0.014)NET(0.984)PK;AEDGATPSPSNET(1)PK;AEDGATPSPSNET(1)PK;AEDGATPSPSNET(1)PK;AEDGATPSPSNET(1)PK;AEDGATPSPS(0.001)NET(0.999)PK 265.43 1.56E-39 1693155100 577674 493276 531642.7 418393.8 388830.4 305773.1 524449 400989.7 361672.7 552163 TRUE FALSE 621901.1656 468780.6311 549367.4023 384209.6882 373562.9648 317409.5096 455588.2163 453400.4306 393130.3377 534145.9665 1.164290671 0.877626455 1.028496772 0.719297181 0.699364946 0.594237399 0.85292831 0.848832452 0.735997952 1 19.02687452 -5.757791901 24.99999857 0.764472399 1.008886872 0.455074053 0.121757573 83.7202787 573812.2592 0.033066768 0.05452576 1.75E-06 5.757791901 0.244414473 AEDGATPSPSNET(ph)PKK ddPTM_A459_MK2206_30min_R1 2 AEDGATPSPSNETPKK 16 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPSPSNET(1)PKK;AEDGATPSPS(0.002)NET(0.998)PKK 115.38 0.0025014 309826000 8623.7 9872 9379.8 7594.4 6666.6 5575.3 7761.4 7393.7 7996.6 8695.7 TRUE FALSE 7890.20903 9229.331006 8743.12531 8179.322004 6401.055205 5890.968668 7243.651167 7329.05766 8827.875186 9772.988965 0.807348607 0.944371373 0.894621424 0.836931468 0.654974157 0.602780653 0.74119097 0.749930005 0.903293273 1 13.25458415 -6.028464415 8.372638095 0.751814523 0.884798364 0.1373741 0.112202499 0.422101169 114.3590617 0.033031163 0.04386888 9.37E-07 6.028464415 0.132983841 AEDGATPSPSNET(ph)PKK ddPTM_A459_MK2206_30min_R2 3 AEDGATPSPSNETPKK 16 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPSPS(0.005)NET(0.995)PKK;AEDGATPSPS(0.048)NET(0.952)PKK;AEDGATPSPSNET(1)PKK 102.59 0.0060635 547669000 126809 122742 132000 118908 117251 83900 135243 109888 100170 148915 TRUE FALSE 136517.5945 116646.8108 136400.8141 109192.836 112647.1366 87092.87329 117485.4316 124250.7389 108882.6055 144055.9157 0.947670867 0.809732875 0.946860206 0.757989253 0.781968141 0.604576861 0.81555437 0.862517435 0.755835711 1 17.13626938 -5.771010711 24.99672147 0.783330913 0.892252476 0.175516147 0.100234779 311.3654815 813170.4999 0.027611215 0.041556427 1.69E-06 5.771010711 0.108921563 AEDGATPSPSNET(ph)PKKK ddPTM_A459_MK2206_30min_R2 1 AEDGATPSPSNETPKKK 17 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPS(0.001)PS(0.017)NET(0.981)PKKK 68.525 0.047032 12593000 10827 56485 28962 33581 63982 46455 54879 29506 74374 25540 TRUE FALSE 11655.92344 53680.03704 29927.57862 30837.32488 61469.7452 48222.87758 47673.32138 33362.53551 80842.91608 24706.63189 0.471773065 2.172697488 1.211317623 1.248139569 2.487985633 1.951819163 1.929575896 1.350347375 3.272113999 1 14.59261073 -6.237789102 24.23731874 2.010363464 1.335414052 0.206577599 0.689672627 912.1741547 934814.9546 0.19225399 0.248025606 5.78E-07 6.237789102 -0.674949412 AEDGS(ph)VIDYELIDQDAR ddPTM_A459_MK2206_30min_R1 2 AEDGSVIDYELIDQDAR 17 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;H0YM50;H0YNP5;H0YN28;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 1 AEDGS(1)VIDYELIDQDAR;AEDGS(1)VIDYELIDQDAR 351.46 2.19E-175 10431800 2628.8 2692.9 2877.3 2284.29 2829.9 2731.9 2860.3 2538.1 2533.9 2291.1 TRUE FALSE 2405.206756 2517.591721 2681.996893 2460.226412 2717.179091 2886.577817 2669.494606 2515.909659 2797.307973 2574.938765 0.934083089 0.977728774 1.041576961 0.955450454 1.055240275 1.121027753 1.036721588 0.97707553 1.086359028 1 11.33032241 -4.41624637 0.733405973 1.042107707 0.807300718 0.344277767 0.04591684 5.443775326 1.533800598 0.01906453 1.191803082 3.83E-05 4.41624637 -0.234806989 AEDGSVIDYELIDQDAR ddPTM_A459_MK2206_30min_R1 2 AEDGSVIDYELIDQDAR 17 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;H0YM50;H0YNP5;H0YN28;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 0 ; 342.51 1.13E-153 44654000 6547.6 6593.9 6465.3 6008.8 6922 5809.3 6871.9 6418.1 5403.9 6250.4 FALSE TRUE 5990.692237 6164.635912 6026.453449 6471.598817 6646.282082 6138.217546 6413.488089 6361.987228 5965.654743 7024.74674 0.852798323 0.877559881 0.85788907 0.921257243 0.946124085 0.873799124 0.912984955 0.905653608 0.849234138 1 12.7782305 AEDGSVIDYELIDQDAR ddPTM_A459_MK2206_30min_R2 2 AEDGSVIDYELIDQDAR 17 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;H0YM50;H0YNP5;H0YN28;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 0 ; 250.05 2.21E-29 58147000 164147 146287 130762 146840 157738 193807 187084 145496 175000 188871 FALSE TRUE 176714.2205 139022.6003 135121.5398 134842.7023 151544.4136 201182.4612 162519.6461 164512.8268 190221.1837 182708.1547 0.967193943 0.76089981 0.739548489 0.738022353 0.829434317 1.101113749 0.889504063 0.900413159 1.041120381 1 17.4791815 -6.591865165 8.720956497 0.973827237 0.79281048 0.529103139 0.084376966 0.238764149 27.47046838 0.028054313 0.028048877 2.56E-07 6.591865165 -0.181016757 AEDKEWMPVTK ddPTM_A459_MK2206_30min_R2 1 AEDKEWMPVTK 11 1 P15880;E9PQD7;E9PMM9;E9PPT0 P15880 RPS2 40S ribosomal protein S2 0 115.92 0.017015 4226000 31499 37196 34119 38871 38383 35946 44618 34287 31334 34776 FALSE TRUE 33910.58766 35348.90073 35256.51043 35695.11496 36875.89056 37313.95022 38759.603 38768.42862 34059.37468 33641.26197 1.008005814 1.050760247 1.048013908 1.061051604 1.096150632 1.109172131 1.152144739 1.152407085 1.012428568 1 15.03794421 -5.919673006 1.532071164 1.099453198 1.03102454 0.15948951 0.04914787 0.584604819 2.788566027 0.016493967 0.031028944 1.20E-06 5.919673006 -0.068428659 AEDNADTLALVFEAPNQEK ddPTM_A459_MK2206_30min_R1 2 AEDNADTLALVFEAPNQEK 19 0 P12004 P12004 PCNA Proliferating cell nuclear antigen 0 ; 293.42 2.57E-172 2688900 4352.9 3922.6 4140 4162.3 4341.2 3728.2 4113.9 3828.4 3130.63 3346.23 FALSE TRUE 3982.662997 3667.238027 3858.988335 4482.881067 4168.280811 3939.287462 3839.469237 3794.928702 3456.070192 3760.786235 1.05899744 0.975125359 1.026112119 1.192006348 1.10835356 1.047463806 1.020921955 1.009078545 0.918975442 1 11.87681859 -7.648618511 1.693533071 0.964034736 1.069398756 0.359065203 0.056597833 0.471295793 2.620282367 0.044461968 0.019433943 2.25E-08 7.648618511 0.10536402 AEDNADTLALVFEAPNQEK ddPTM_A459_MK2206_30min_R2 1 AEDNADTLALVFEAPNQEK 19 0 P12004 P12004 PCNA Proliferating cell nuclear antigen 0 121.82 0.005893 1153500 8082.8 8947.8 6688.2 8384.6 9660.8 8778.7 9862 5003 6355.7 7007.9 FALSE TRUE 8701.625383 8503.465263 6911.18125 7699.551359 9281.46845 9112.77958 8567.107554 5656.909278 6908.507298 6779.232797 1.283570817 1.254340354 1.019463626 1.135755563 1.369103072 1.344219892 1.263728184 0.834446824 1.019069193 1 12.7269063 -7.751267203 24.99918233 0.945068502 1.235901075 0.610745723 0.105103562 142.5346494 350295.8079 0.055134079 0.031369845 1.77E-08 7.751267203 0.290832573 AEDQTES(ph)SCESHR ddPTM_A459_MK2206_30min_R1 1 AEDQTESSCESHR 13 0 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 AEDQT(0.001)ES(0.836)S(0.161)CES(0.002)HR 118.5 0.0022557 1779000 847.24 674.09 721.8 884.39 786.24 600.16 1040.1 716.16 273.97 710.43 TRUE FALSE 775.177789 630.2066185 672.8062271 952.505871 754.9223959 634.1405406 970.7168268 709.8986886 302.4501619 798.4434319 0.970861251 0.78929401 0.842647331 1.192953481 0.94549265 0.794221 1.215761553 0.889103298 0.378799737 1 9.641046389 -8.019192618 24.9501475 0.67091702 0.961541687 0.233755411 0.195947197 972.8563845 1264692.903 0.122797449 0.048025146 9.57E-09 8.019192618 0.290624667 AEDQTES(ph)SCESHR ddPTM_A459_MK2206_30min_R2 3 AEDQTESSCESHR 13 0 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 AEDQTES(0.994)S(0.006)CESHR;AEDQTES(0.959)S(0.04)CES(0.001)HR;AEDQTES(0.973)S(0.026)CESHR 161.91 0.00024045 10801100 56140 59709.2 51023.9 60855.3 64921.2 64901.6 69769.8 46230.9 51358 65944.1 TRUE FALSE 60438.12156 56744.12795 52725.01136 55883.22732 62372.06749 67371.47587 60608.94145 52273.43736 55825.02601 63792.34942 0.947419591 0.88951306 0.826509947 0.876017702 0.977735858 1.056105889 0.950097339 0.819431136 0.875105346 1 15.96109579 -4.70922305 21.05436738 0.916170236 0.947422914 0.012314974 0.072771814 15178.87432 6116760.481 0.020012955 12.5263317 1.95E-05 4.70922305 0.031252678 AEDQTES(ph)SCESHRK ddPTM_A459_MK2206_30min_R1 1 AEDQTESSCESHRK 14 1 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 AEDQT(0.008)ES(0.938)S(0.052)CES(0.002)HRK 79.514 0.01842 8374100 1656.3 988.48 929.91 1204 838.16 900.31 1437.6 2052.1 84.541 687.1 TRUE FALSE 1515.422987 924.1297723 866.7903001 1296.732289 804.7743124 951.2847742 1341.700327 2034.158706 93.32933948 772.2231353 1.962415937 1.196713398 1.122460932 1.679219683 1.042152554 1.231878107 1.737451606 2.634159238 0.120857995 1 9.592873967 -8.290870515 24.99979728 0.560428991 1.527641249 0.398322204 0.49635811 866.4084091 735948.5384 0.48032927 0.124095391 5.12E-09 8.290870515 0.967212258 AEDQTESS(ph)CESHR ddPTM_A459_MK2206_30min_R1 1 AEDQTESSCESHR 13 0 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 AEDQT(0.004)ES(0.319)S(0.672)CES(0.005)HR 160.8 0.00036386 977280 265.74 253.76 223.62 156.62 276.51 98.858 183.58 294.11 60.99 211.62 TRUE FALSE 243.1374175 237.2401779 208.4412974 168.6828995 265.4960212 104.4552545 171.3337132 291.5386273 67.33012875 237.8370832 1.022285567 0.997490276 0.87640369 0.709237169 1.116293631 0.439188259 0.72038267 1.225791299 0.283093485 1 7.893829866 -5.38262039 2.749007165 0.79030286 1.017145061 0.097679276 0.270735108 0.67116409 9.649894997 0.071419852 0.185365154 4.14E-06 5.38262039 0.226842201 AEDQTESSCESHR ddPTM_A459_MK2206_30min_R2 1 AEDQTESSCESHR 13 0 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 0 108.66 0.012798 0 2825.5 2902.4 2924.7 5215.6 3846.5 6447.5 2814.3 2825.1 6141.6 2179 FALSE TRUE 3041.822452 2758.271036 3022.208038 4789.468796 3695.467083 6692.86413 2444.779029 3194.35027 6675.785267 2107.899408 1.443058639 1.308540163 1.433753445 2.272152446 1.753151535 3.175134498 1.159817693 1.515418742 3.167032184 1 11.04159031 -5.70497503 8.142828268 2.03007483 1.381768931 0.138921846 0.695251001 0.501621453 63.95120423 0.183485686 0.317510097 1.97E-06 5.70497503 -0.648305899 AEEAS(ph)HWLWSRSK ddPTM_A459_MK2206_30min_R2 1 AEEASHWLWSRSK 13 1 O15031 O15031 PLXNB2 Plexin-B2 1 AEEAS(1)HWLWSRSK 72.175 0.030604 3865600 4358.8 32085 12612 53264 51171 128270 18934 23317 78912 11280 TRUE FALSE 4692.513079 30491.70556 13032.47779 48912.16082 49161.76943 133151.4047 16447.94306 26364.61196 85775.62312 10911.93452 0.430034937 2.794344622 1.194332477 4.482446326 4.505321153 12.20236471 1.507335204 2.416126297 7.860716442 1 13.41361927 -5.84508269 4.101534808 5.12874899 1.592417946 0.193923072 3.13858744 0.363805736 11.52558029 0.909906267 1.424884683 1.43E-06 5.84508269 -3.536331044 AEEDEILNRS(ph)PR ddPTM_A459_MK2206_30min_R1 5 AEEDEILNRSPR 12 1 P27824-3;P27824;P27824-2 P27824-3 CANX Calnexin 1 AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR 219.97 1.62E-07 2070447400 30767.2 29240.6 18175.5 23757.6 35376.9 29704.6 29183.5 26160.8 28898.5 18941.3 TRUE FALSE 28150.28807 27337.03163 16941.7977 25587.41447 33967.76316 31386.44878 27236.72196 25932.07888 31902.60249 21287.89124 1.322361513 1.284158741 0.795841989 1.201970368 1.595637763 1.474380361 1.279446689 1.218161 1.498626713 1 14.37774542 -4.810870657 6.426178554 1.268810618 1.322351117 0.005747231 0.224754872 1.715778293 158.1004418 0.059481722 0.260839618 1.55E-05 4.810870657 0.053540499 AEEDEILNRS(ph)PR ddPTM_A459_MK2206_30min_R2 5 AEEDEILNRSPR 12 1 P27824-3;P27824;P27824-2 P27824-3 CANX Calnexin 1 AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR 201.76 0.00026386 1822042800 1251195 669951 724211 762757 658926 1042318 1543252 666653 1022928 714857 TRUE FALSE 1346987.451 636682.2075 748355.8333 700437.3132 633053.2544 1081984.142 1340621.159 753786.8361 1111900.428 691531.2746 1.94783302 0.920684618 1.082172073 1.012878721 0.915436912 1.564620693 1.93862694 1.090025663 1.607881623 1 19.39943497 -6.777860907 24.83547764 1.477007382 1.147375042 0.105984004 0.371946962 431.8900441 653174.3882 0.128535149 0.113686353 1.67E-07 6.777860907 -0.329632341 AEEDMDEAIEKGEAEQS(ph)EEEADEEDKAEDAR ddPTM_A459_MK2206_30min_R1 1 AEEDMDEAIEKGEAEQSEEEADEEDKAEDAR 31 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AEEDMDEAIEKGEAEQS(1)EEEADEEDKAEDAR 106.1 1.89E-11 7271900 367.22 608.15 606.4 198.73 276.86 51.186 367.83 196.11 1119.8 1619.4 TRUE FALSE 335.9860107 568.5593245 565.2392575 214.036219 265.8320799 54.08410709 343.2927318 194.3954309 1236.207217 1820.023498 0.184605315 0.3123912 0.310567011 0.1176008 0.146059697 0.029716159 0.188619945 0.106809297 0.679225965 1 10.82974136 -8.446493201 3.165958281 0.994840742 0.176378198 0.911782636 0.085391967 0.065209468 1.312484411 0.090794758 0.024225988 3.58E-09 8.446493201 -0.818462544 down AEEDMDEAIEKGEAEQS(ph)EEEADEEDKAEDAR ddPTM_A459_MK2206_30min_R2 1 AEEDMDEAIEKGEAEQSEEEADEEDKAEDAR 31 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AEEDMDEAIEKGEAEQS(1)EEEADEEDKAEDAR 58.191 0.00099203 10112000 112570 51812 77355 50582 52502 37361 75272 54608 39414 100350 TRUE FALSE 121188.4458 49239.09142 79933.97709 46449.2888 50440.50768 38782.79904 65388.69598 61745.4531 42842.15848 97075.58772 1.248392604 0.507224242 0.823419966 0.478485785 0.519600333 0.399511349 0.673585373 0.636055414 0.44132783 1 16.56682092 -2.504533792 9.992118163 0.645019199 0.865151911 0 0.262108573 0 0 0.057061666 0 0.003129437 2.504533792 0.220132712 AEEDTQFNYHR ddPTM_A459_MK2206_30min_R2 1 AEEDTQFNYHR 11 0 G8JLG1;H0Y7K8;Q14683 G8JLG1 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A 0 95.477 0.035343 0 14594 18071 14124 19152 20272 24135 15278 11591 15424 14870 FALSE TRUE 15711.32786 17173.62042 14594.88711 17587.22034 19476.01942 25053.47434 13271.98025 13105.9835 16765.55164 14384.79312 1.092217853 1.193873299 1.014605284 1.222625879 1.353931145 1.741663862 0.922639633 0.911099895 1.165505232 1 13.81225685 AEEKENDTVTIS(ph)PK ddPTM_A459_MK2206_30min_R1 3 AEEKENDTVTISPK 14 1 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 AEEKENDTVT(0.04)IS(0.96)PK;AEEKENDTVT(0.003)IS(0.997)PK;AEEKENDTVT(0.001)IS(0.999)PK 194.67 0.00057568 35082100 11005.2 13617.4 14638.7 12286.2 8417.3 7077.3 8888.8 9388.3 11948.1 10059.2 TRUE FALSE 10069.14995 12730.90478 13645.06583 13232.48525 8082.021117 7478.01061 8295.844371 9306.219083 13190.14775 11305.40964 0.890648837 1.12608965 1.206950147 1.170456063 0.714880873 0.661454193 0.733794231 0.823165138 1.166711174 1 13.46472565 -6.255366179 24.98847783 0.825921518 1.108248144 0.360990304 0.159873445 516.7687313 2126268.305 0.049959303 0.062843869 5.55E-07 6.255366179 0.282326626 AEEKENDTVTIS(ph)PK ddPTM_A459_MK2206_30min_R2 1 AEEKENDTVTISPK 14 1 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 AEEKENDTVT(0.002)IS(0.998)PK 95.873 0.0067053 20387000 205970 197490 215900 153470 185080 107760 237920 163150 134920 234680 TRUE FALSE 221739.2216 187682.9338 223097.9982 140931.0101 177812.8292 111860.8823 206680.8182 184474.2652 146655.0977 227022.4108 0.976728336 0.826715447 0.982713545 0.620780167 0.783239102 0.492730572 0.910398306 0.812581738 0.645993923 1 17.7924752 -5.749941754 24.99969059 0.74150504 0.918518756 0.239902859 0.142709866 311.1997841 676646.4637 0.037332417 0.063954286 1.78E-06 5.749941754 0.177013717 AEEKS(ph)PISINVK ddPTM_A459_MK2206_30min_R2 1 AEEKSPISINVK 12 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 1 AEEKS(1)PISINVK 143.05 0.0040705 15052000 32465 32538 35159 31286 34865 27352 39794 25141 24460 33742 TRUE FALSE 34950.54536 30922.21023 36331.18351 28729.83372 33496.02492 28392.89953 34569 28427.01502 26587.48659 32641.0013 1.070755919 0.947342575 1.113053585 0.880176238 1.026194773 0.869853816 1.059066775 0.870898989 0.814542616 1 14.99439769 -6.097485676 0.600840891 0.911795734 1.047001451 0.190942388 0.087658226 1.844990079 1.300928228 0.058040928 0.142248254 7.99E-07 6.097485676 0.135205717 AEEKSPIS(ph)INVK ddPTM_A459_MK2206_30min_R1 1 AEEKSPISINVK 12 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 1 AEEKS(0.388)PIS(0.612)INVK 74.649 0.028135 274030000 7164.7 9092.1 8515.9 8109.3 6412.7 5404.5 6303.5 7376.6 8444.3 6686.5 TRUE FALSE 6555.304642 8500.202637 7937.864435 8733.879691 6157.26858 5710.49812 5883.005016 7312.107164 9322.115203 7514.8741 0.872310641 1.131117105 1.056287082 1.162212377 0.81934421 0.75989272 0.782848114 0.97301792 1.24048854 1 12.87553322 -6.263424804 24.97887328 0.912126666 1.060941841 0.142621511 0.147828074 327.200178 4116537.802 0.047801656 0.056993122 5.45E-07 6.263424804 0.148815175 AEENTDQAS(ph)PQEDYAGFER ddPTM_A459_MK2206_30min_R1 1 AEENTDQASPQEDYAGFER 19 0 Q9NU22 Q9NU22 MDN1 Midasin 1 AEENTDQAS(1)PQEDYAGFER 287.38 2.86E-85 9591900 1661 1383.1 1654.8 1537.2 1413 1267.7 1217.6 1503.8 1430 1296.6 TRUE FALSE 1519.723228 1293.059939 1542.476787 1655.59541 1356.717218 1339.476078 1136.376126 1490.652435 1578.653617 1457.232597 1.042883086 0.887339428 1.058497312 1.136122959 0.931023106 0.91919168 0.779817943 1.022933771 1.08332302 1 10.50901546 AEENTDQAS(ph)PQEDYAGFER ddPTM_A459_MK2206_30min_R2 2 AEENTDQASPQEDYAGFER 19 0 Q9NU22 Q9NU22 MDN1 Midasin 1 AEENTDQAS(1)PQEDYAGFER;AEENTDQAS(1)PQEDYAGFER 157.57 2.79E-06 29544000 64889 75365 72951 80081 82785 85148 80351 58937 74300 79814 TRUE FALSE 69856.95173 71622.48369 75383.14993 73538.12613 79534.44494 88388.36681 69800.81718 66640.26826 80762.4797 77209.67572 0.904769397 0.927636116 0.976343305 0.952447028 1.030109817 1.144783552 0.904042357 0.863107734 1.04601501 1 16.23649403 -5.207884917 1.512882533 0.990604504 0.898676705 0.147549181 0.073150911 1.293210995 4.601697808 0.023580343 0.139418494 6.20E-06 5.207884917 -0.091927799 AEEQQLPPPLS(ph)PPS(ph)PSTPNHR ddPTM_A459_MK2206_30min_R1 1 AEEQQLPPPLSPPSPSTPNHR 21 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 2 AEEQQLPPPLS(1)PPS(0.574)PS(0.127)T(0.299)PNHR 107.34 0.00052901 1264900 2036.6 1454.8 2009 1274.6 2517.8 2144.2 2686.4 1907.5 1535.5 1812.2 TRUE FALSE 1863.376475 1360.092256 1872.634677 1372.769913 2417.510694 2265.602751 2507.195158 1890.822929 1695.12072 2036.709017 0.914895775 0.667789185 0.919441443 0.674013765 1.186969112 1.112384112 1.231003121 0.928371659 0.832284192 1 10.99202416 -6.260149677 24.99998341 1.057239774 0.79397508 0.460914078 0.134621675 109.2975281 2118657.793 0.041931121 0.051171535 5.49E-07 6.260149677 -0.263264694 AEEQQLPPPLS(ph)PPS(ph)PSTPNHR ddPTM_A459_MK2206_30min_R2 3 AEEQQLPPPLSPPSPSTPNHR 21 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 2 AEEQQLPPPLS(1)PPS(0.909)PS(0.05)T(0.041)PNHR;AEEQQLPPPLS(0.992)PPS(0.715)PS(0.162)T(0.131)PNHR;AEEQQLPPPLS(0.942)PPS(0.711)PS(0.208)T(0.139)PNHR 114.84 0.00039263 2407000 45782.4 66234 49826 75833 72875 83724 74491 56143 66965 70827 TRUE FALSE 49287.53574 62944.91587 51487.17397 69637.20132 70013.56133 86910.17549 64710.24222 63481.08287 72789.49465 68515.92079 0.719358876 0.918690359 0.751462921 1.016365255 1.021858285 1.268466869 0.944455558 0.926515796 1.062373443 1 16.06415164 -5.810326597 7.200230257 1.037640268 0.808963596 0.541055335 0.10016561 0.169142636 20.11254912 0.029100618 0.043795764 1.55E-06 5.810326597 -0.228676672 AEEQQLPPPLS(ph)PPSPST(ph)PNHR ddPTM_A459_MK2206_30min_R1 2 AEEQQLPPPLSPPSPSTPNHR 21 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 2 AEEQQLPPPLS(0.99)PPS(0.287)PS(0.091)T(0.631)PNHR;AEEQQLPPPLS(0.957)PPS(0.325)PS(0.244)T(0.474)PNHR 78.274 0.0078992 10057700 3740.11 2614.01 2985.26 2415.46 3491.15 4007.22 4517.98 3188.61 2807.68 3056.39 TRUE FALSE 3421.994004 2443.837474 2782.628869 2601.499148 3352.090103 4234.105333 4216.593798 3160.732319 3099.548383 3435.038668 0.99620247 0.711443949 0.810072065 0.757342027 0.975852218 1.23262232 1.227524405 0.920144611 0.902332894 1 11.74611062 -6.442513501 4.88907399 1.066415302 0.812866968 0.447884476 0.124080714 0.209609357 8.859548927 0.042153528 0.047360631 3.61E-07 6.442513501 -0.253548334 AEEQQLPPPLS(ph)PPSPSTPNHR ddPTM_A459_MK2206_30min_R1 3 AEEQQLPPPLSPPSPSTPNHR 21 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 AEEQQLPPPLS(0.999)PPSPSTPNHR;AEEQQLPPPLS(1)PPSPSTPNHR;AEEQQLPPPLS(0.965)PPS(0.015)PS(0.005)T(0.015)PNHR 158.12 9.79E-08 116899000 9386.7 6197.1 7834.3 6327.8 11322.4 10635.2 11235.8 8654.2 7506.2 7083.5 TRUE FALSE 8588.311873 5793.667664 7302.529544 6815.168252 10871.40483 11237.35583 10486.28028 8578.537242 8286.496351 7961.057458 1.078790339 0.727751017 0.917281351 0.856063191 1.365572964 1.411540602 1.31719691 1.077562533 1.040878852 1 12.95874436 -6.249058226 24.84127484 1.222227781 0.884620693 0.489889691 0.152577587 589.902214 1183566.285 0.047365131 0.060697585 5.64E-07 6.249058226 -0.337607089 AEEQQLPPPLS(ph)PPSPSTPNHR ddPTM_A459_MK2206_30min_R2 5 AEEQQLPPPLSPPSPSTPNHR 21 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 AEEQQLPPPLS(0.993)PPS(0.006)PSTPNHR;AEEQQLPPPLS(0.958)PPS(0.039)PS(0.002)T(0.001)PNHR;AEEQQLPPPLS(0.97)PPS(0.025)PS(0.004)T(0.001)PNHR;AEEQQLPPPLS(0.989)PPS(0.008)PS(0.001)T(0.001)PNHR;AEEQQLPPPLS(0.95)PPS(0.018)PS(0.027)T(0.006)PNHR 124.91 4.67E-05 157157000 138047 209213 165423 247038 221623 254750 235046 174770 182306 189934 TRUE FALSE 148615.9845 198823.7866 170938.1203 226854.2052 212920.9675 264444.6898 204184.1779 197613.0391 198162.6463 183736.4691 0.808854035 1.082113897 0.930343992 1.234671626 1.158838898 1.439260758 1.111288242 1.075524309 1.07851559 1 17.48727848 -5.754834049 24.99115585 1.169967107 0.954604913 0.369849058 0.128271166 171.2741383 648004.6679 0.035700068 0.060023533 1.76E-06 5.754834049 -0.215362195 AEEQQLPPPLSPPS(ph)PSTPNHR ddPTM_A459_MK2206_30min_R2 5 AEEQQLPPPLSPPSPSTPNHR 21 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 AEEQQLPPPLS(0.005)PPS(0.598)PS(0.199)T(0.199)PNHR;AEEQQLPPPLS(0.005)PPS(0.721)PS(0.063)T(0.212)PNHR;AEEQQLPPPLS(0.029)PPS(0.613)PS(0.179)T(0.179)PNHR;AEEQQLPPPLS(0.022)PPS(0.72)PS(0.224)T(0.034)PNHR;AEEQQLPPPLS(0.137)PPS(0.631)PS(0.116)T(0.116)PNHR 195.94 1.19E-16 68492700 124237 198842 159148 250434 216431 246657 218619 169836 198843 182977 TRUE FALSE 133748.6802 188967.7954 164453.9149 229972.7411 207932.8315 256043.705 189914.0627 192034.1483 216138.0047 177006.4755 0.755614617 1.067575607 0.929084173 1.299233491 1.174718783 1.446521684 1.072921554 1.084899001 1.221073998 1 17.43344261 -4.56703323 0.986242295 1.186300821 0.417033448 0.443651078 0.137448462 2.584740487 1.5231326 0.045213282 2.335243089 2.71E-05 4.56703323 -0.769267374 AEEQQLPPPLSPPSPST(ph)PNHR ddPTM_A459_MK2206_30min_R1 1 AEEQQLPPPLSPPSPSTPNHR 21 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 AEEQQLPPPLS(0.008)PPS(0.313)PS(0.093)T(0.585)PNHR 174.62 4.44E-11 35140000 2259.4 1552.9 1468.9 1210.6 2577.3 2621.8 2773 2298.9 1480.5 1654.1 TRUE FALSE 2067.226165 1451.805928 1369.195161 1303.840622 2474.640683 2770.24405 2588.01823 2278.80096 1634.403273 1859.022396 1.111996375 0.780951284 0.736513537 0.701358211 1.331151625 1.490161741 1.39213935 1.225806082 0.879173525 1 10.86032844 -6.264903034 24.9812839 1.253170217 0.822137355 0.472158816 0.198471564 253.5357261 1828599.114 0.063732579 0.075176905 5.43E-07 6.264903034 -0.431032862 AEEYEFLTPVEEAPK ddPTM_A459_MK2206_30min_R1 2 AEEYEFLTPVEEAPK 15 0 J3KTF8;J3QQX2;P52565;J3KRE2 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 0 ; 213.59 6.99E-06 8639600 4367.2 4126.7 4765.6 4235.3 4605.5 4342.4 3956.4 3731.7 3401.6 3740.6 FALSE TRUE 3995.746707 3858.05108 4442.12435 4561.50354 4422.053183 4588.262935 3692.475775 3699.07414 3755.208493 4204.013768 0.950459948 0.917706576 1.056638868 1.085035348 1.051864581 1.091400549 0.878321523 0.879891062 0.893243624 1 12.03755168 -7.273482829 24.93314213 0.902854967 1.025934682 0.445155157 0.061206459 709.7731417 1469413.452 0.027657089 0.018812496 5.33E-08 7.273482829 0.123079715 AEFT(ph)SPPSLFK ddPTM_A459_MK2206_30min_R1 1 AEFTSPPSLFK 11 0 Q6UN15;Q6UN15-5;Q6UN15-3;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AEFT(0.496)S(0.496)PPS(0.009)LFK 119.21 0.011892 80077000 6928 6566.2 6305 5887.9 6503.5 5246.6 6036.8 6055.5 5416.9 4508 TRUE FALSE 6338.73722 6138.739187 5877.034167 6341.387078 6244.451824 5543.657958 5634.096087 6002.557402 5980.00614 5066.485074 1.251111397 1.211636686 1.159982529 1.251634414 1.232501771 1.094182234 1.112032505 1.184757739 1.180306673 1 12.30676949 -6.754618873 24.96072521 1.125664229 1.219103013 0.489079984 0.054092162 157.9506739 578045.0981 0.018012904 0.017630919 1.76E-07 6.754618873 0.093438785 AEFT(ph)SPPSLFK ddPTM_A459_MK2206_30min_R2 2 AEFTSPPSLFK 11 0 Q6UN15;Q6UN15-5;Q6UN15-3;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AEFT(0.638)S(0.309)PPS(0.053)LFK;AEFT(0.967)S(0.033)PPSLFK 136.81 0.0032392 100256000 195547 219782 176398 205987 200416 182423 242728 179606 166766 194561 TRUE FALSE 210518.2287 208867.9455 182279.0213 189157.2032 192546.6608 189365.2351 210857.522 203081.1209 181271.0052 188212.4905 1.118513591 1.1097454 0.968474626 1.005019394 1.02302807 1.006124698 1.120316306 1.078999169 0.963118892 1 17.52200285 -5.159113229 8.013794016 1.026094635 1.115709917 0.401477727 0.045297279 0.320998334 22.4896599 0.012215062 0.032682111 6.93E-06 5.159113229 0.089615282 AEFTS(ph)PPSLFK ddPTM_A459_MK2206_30min_R1 1 AEFTSPPSLFK 11 0 Q6UN15;Q6UN15-5;Q6UN15-3;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AEFT(0.099)S(0.893)PPS(0.009)LFK 127.52 0.0029518 76008000 7424.3 6994 7195.8 5814 6433.2 5907.2 6367.4 5938 5462.9 5455 TRUE FALSE 6792.824298 6538.689329 6707.369145 6261.795287 6176.952021 6241.660559 5942.642364 5886.084692 6030.788004 6130.806583 1.107982156 1.06653003 1.094043509 1.021365656 1.007526814 1.018081467 0.969308407 0.960083247 0.983685902 1 12.58186118 -6.000080514 0.832833921 0.976884258 1.10354894 0.853820595 0.018473507 0.254659093 0.35395581 0.008968464 0.021304329 1.00E-06 6.000080514 0.126664682 AEFTS(ph)PPSLFK ddPTM_A459_MK2206_30min_R2 2 AEFTSPPSLFK 11 0 Q6UN15;Q6UN15-5;Q6UN15-3;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AEFT(0.306)S(0.683)PPS(0.01)LFK;AEFT(0.061)S(0.552)PPS(0.387)LFK 110.93 0.0085377 3523100 31750 38206 33951 35361 38868 31216 40043 28731 32254 33676 TRUE FALSE 34180.80441 36308.7456 35082.90939 32471.89319 37341.84702 32403.94675 34785.306 32486.24035 35059.39462 32577.15488 1.0492262 1.114546244 1.076917537 0.996768849 1.146258695 0.994683141 1.067782197 0.997209255 1.076195719 1 14.99157299 -6.641003496 0.101799712 0.952697613 1.158836282 0.150670067 0.047263812 42.67026557 1.665938536 1.163961204 2.093858016 2.29E-07 6.641003496 0.206138669 AEFTS(ph)Y(ph)KETAS(ph)S(ph)RHLRFK ddPTM_A459_MK2206_30min_R2 1 AEFTSYKETASSRHLRFK 18 3 Q86V48-2;Q86V48-3;Q86V48;E5RFK8;E5RHU7 Q86V48-2 LUZP1 Leucine zipper protein 1 4 AEFT(0.538)S(0.606)Y(0.833)KET(0.024)AS(0.999)S(1)RHLRFK 52.273 0.04235 0 12099 14622 12532 18753 15740 13278 14883 11677 10393 11062 TRUE FALSE 13025.30874 13895.89274 12949.81063 17220.81991 15121.96851 13783.30359 12928.84422 13203.22399 11296.96435 10701.04785 1.217199374 1.298554398 1.210144166 1.609264827 1.413129698 1.288033078 1.208184881 1.23382534 1.055687678 1 13.38546445 -8.027145226 1.051540639 1.000734787 1.346480906 0.539932195 0.110271077 0.422294712 0.869470849 0.109364153 0.039324235 9.39E-09 8.027145226 0.345746119 AEGAAT(ph)EEEGTPK ddPTM_A459_MK2206_30min_R1 1 AEGAATEEEGTPK 13 0 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 AEGAAT(0.992)EEEGT(0.008)PK 172.57 0.00040255 4243700 2196.5 1789.9 1853.5 1713.1 1796.2 1605.8 2305.4 2047.5 2482.9 2120.4 TRUE FALSE 2009.676141 1673.377185 1727.689584 1845.043259 1724.65355 1696.719008 2151.610972 2029.598923 2741.00634 2383.09116 0.843306448 0.702187651 0.724978386 0.774222694 0.723704397 0.711982419 0.902865576 0.851666507 1.150189462 1 11.21861842 -7.847985762 1.501856154 1.062707723 0.746540097 0.750516061 0.069274707 0.187631972 0.777146454 0.054093595 0.019789411 1.42E-08 7.847985762 -0.316167626 AEGAAT(ph)EEEGTPK ddPTM_A459_MK2206_30min_R2 1 AEGAATEEEGTPK 13 0 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 AEGAAT(1)EEEGTPK 124.48 0.0052627 7707300 50350 36255 43901 34179 38311 33818 57139 41016 41574 44784 TRUE FALSE 54204.83471 34454.62942 45364.63743 31386.46637 36806.71764 35104.96769 49636.58066 46376.93203 45190.03137 43322.70175 1.251187773 0.795301956 1.047133156 0.724480817 0.849594235 0.810313445 1.145740655 1.070499534 1.043102797 1 15.4028356 -7.264949234 24.99726891 1.070710708 0.902297469 0.207312506 0.144360337 459.7727712 3274490.096 0.05738849 0.040428343 5.43E-08 7.264949234 -0.168413239 AEGAATEEEGT(ph)PK ddPTM_A459_MK2206_30min_R1 5 AEGAATEEEGTPK 13 0 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 AEGAAT(0.004)EEEGT(0.996)PK;AEGAAT(0.015)EEEGT(0.985)PK;AEGAATEEEGT(1)PK;AEGAAT(0.008)EEEGT(0.992)PK;AEGAAT(0.019)EEEGT(0.981)PK 186.16 0.00023314 59327600 14713.7 17964.6 15368.3 13281.6 10128.4 10999.7 15260 13344.8 23058.4 24766.5 TRUE FALSE 13462.22255 16795.10127 14325.14261 14304.55113 9724.964381 11622.49351 14242.03324 13228.12782 25455.4032 27834.761 0.483647859 0.603385863 0.514649384 0.513909609 0.349381997 0.417553199 0.511663572 0.475237701 0.914518476 1 14.76460008 -8.308775205 4.049767142 0.990309885 0.482481651 0.898250366 0.063952925 0.068995897 2.306042272 0.065675668 0.018036361 4.91E-09 8.308775205 -0.507828235 down AEGAATEEEGT(ph)PK ddPTM_A459_MK2206_30min_R2 1 AEGAATEEEGTPK 13 0 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 AEGAAT(0.01)EEEGT(0.99)PK 107.99 0.015032 24640000 42304 24213 28374 23712 20848 18667 33744 23290 22611 31633 TRUE FALSE 45542.82677 23010.61763 29319.975 21774.65375 20029.40277 19377.38577 29313.37227 26334.08297 24577.66391 30600.8178 1.488287897 0.751960872 0.958143511 0.711570975 0.654538153 0.633230977 0.957927741 0.860567948 0.803170166 1 14.90128259 -4.758720678 24.99781654 0.805290918 1.488288808 0.728973668 0.123122783 39.20409365 360402.772 0.031437318 0.21064849 1.74E-05 4.758720678 0.68299789 AEGAATEEEGT(ph)PKESEPQAAAEPAEAK ddPTM_A459_MK2206_30min_R2 2 AEGAATEEEGTPKESEPQAAAEPAEAK 27 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 AEGAATEEEGT(0.932)PKES(0.068)EPQAAAEPAEAK;AEGAATEEEGT(0.978)PKES(0.022)EPQAAAEPAEAK 113.67 3.52E-10 27211000 79401 113762 114339 99048 110579 72942 151937 100252 133211 109933 TRUE FALSE 85480.00161 108112.7445 118151.0052 90955.46156 106237.1128 75717.85892 131987.4894 113355.2806 144797.452 106345.8952 0.803792205 1.016614175 1.111006729 0.855279476 0.998977089 0.711996065 1.241115034 1.065911198 1.361570672 1 16.69840482 -7.286680758 24.99162104 1.172641845 0.930676096 0.433315098 0.139912119 767.7570795 760156.9056 0.056600706 0.038176114 5.17E-08 7.286680758 -0.241965749 AEGAATEEEGTPKES(ph)EPQAAAEPAEAK ddPTM_A459_MK2206_30min_R1 2 AEGAATEEEGTPKESEPQAAAEPAEAK 27 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 AEGAATEEEGT(0.006)PKES(0.994)EPQAAAEPAEAK;AEGAATEEEGT(0.302)PKES(0.698)EPQAAAEPAEAK 150.64 3.18E-14 24660100 3989.5 5058.1 5221.6 5758 4176 3388 3616.3 4896.5 4521.9 2576.7 TRUE FALSE 3650.172075 4728.816771 4867.17234 6201.482158 4009.661077 3579.825632 3375.063225 4853.690417 4991.967687 2895.921049 1.260452897 1.632923236 1.680699252 2.141454153 1.384589224 1.236161336 1.165454157 1.676043764 1.723792742 1 11.49980656 -6.444528292 24.99999443 1.381457619 1.686641406 0.225508805 0.284370361 189.9511089 60608.10688 0.091893114 0.104196973 3.59E-07 6.444528292 0.305183787 AEGDEEGPSGAS(ph)EEEDT ddPTM_A459_MK2206_30min_R2 1 AEGDEEGPSGASEEEDT 17 0 Q96DX7 Q96DX7 TRIM44 Tripartite motif-containing protein 44 1 AEGDEEGPS(0.003)GAS(0.584)EEEDT(0.413) 118.08 0.0016317 0 8114.4 8666.4 9900.4 8057.4 10507 10198 10895 6826.2 7838.1 9477 TRUE FALSE 8735.644703 8236.039178 10230.47439 7399.084646 10094.44239 10586.09204 9464.473413 7718.407778 8519.84377 9167.766266 0.95286512 0.898369236 1.115917891 0.807076057 1.101079815 1.154707889 1.03236417 0.841907129 0.929326024 1 13.16235455 -7.741304614 24.9923184 0.914212395 1.010165067 0.118992996 0.10520329 462.9360495 574621.5018 0.050947921 0.029367314 1.81E-08 7.741304614 0.095952673 AEGDSAGTAGT(ph)PGGTPAGDK ddPTM_A459_MK2206_30min_R2 2 AEGDSAGTAGTPGGTPAGDK 20 0 J3KMX2;B9EGA3;Q92925-3;Q92925-2;Q92925 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 1 AEGDSAGT(0.001)AGT(0.997)PGGT(0.002)PAGDK;AEGDS(0.002)AGT(0.074)AGT(0.897)PGGT(0.027)PAGDK 235.21 2.29E-24 11080900 52626 43843 40577 51476 43095 30642 46525 36546 27711 52195 TRUE FALSE 56655.08702 41665.82037 41929.81693 47270.24614 41402.87377 31808.10278 40416.21161 41322.68768 30121.25269 50491.88142 1.122063299 0.825198412 0.830426907 0.936194984 0.819990711 0.629964697 0.800449705 0.818402613 0.596556354 1 15.62376382 -1.522878745 0.870796226 0.782489605 130.3724045 0.391826367 0.115800316 775.6843866 1.954477107 0.038793808 199419.0933 0.03 1.522878745 129.5899149 AEGEAEEESDFDVFPS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 AEGEAEEESDFDVFPSSPR 19 0 B1AL69;Q7L3B6 B1AL69 CDC37L1 Hsp90 co-chaperone Cdc37-like 1 1 AEGEAEEESDFDVFPS(0.877)S(0.122)PR 103.75 0.0025276 0 205.59 222.87 261.97 257.19 243.55 228.95 310.14 225.46 163.47 167.68 TRUE FALSE 188.1034909 208.3611225 244.1882063 276.9988184 233.8488878 241.9129511 289.4511265 223.488827 180.4632915 188.4534643 0.998142919 1.105636998 1.295748036 1.46985262 1.240883996 1.283674736 1.535928923 1.185909889 0.957601348 1 7.558064506 -8.137932926 4.380329302 0.982517477 1.281018338 0.385368101 0.147000184 0.248692421 7.460092166 0.116929465 0.040861089 7.28E-09 8.137932926 0.298500861 AEGEAEEESDFDVFPSS(ph)PR ddPTM_A459_MK2206_30min_R1 1 AEGEAEEESDFDVFPSSPR 19 0 B1AL69;Q7L3B6 B1AL69 CDC37L1 Hsp90 co-chaperone Cdc37-like 1 1 AEGEAEEESDFDVFPS(0.137)S(0.863)PR 244.27 2.10E-79 0 1289.5 1124.8 1158.3 910.61 937.35 650.98 893.06 723.28 642.49 704.18 TRUE FALSE 1179.821254 1051.575316 1079.677823 980.74534 900.0133646 687.837925 833.4855969 716.9564392 709.2791347 791.4191347 1.490766652 1.328721116 1.364230123 1.239223689 1.137214562 0.869119655 1.053153203 0.90591244 0.896211759 1 9.628298137 -6.229219783 1.206448361 0.937503429 1.411973282 0.893246825 0.067925535 0.135161722 0.403315256 0.026672793 0.040179492 5.90E-07 6.229219783 0.474469853 AEGEPQEES(ph)PLK ddPTM_A459_MK2206_30min_R1 3 AEGEPQEESPLK 12 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEPQEES(1)PLK;AEGEPQEES(1)PLK;AEGEPQEES(1)PLK 178.68 0.00010379 96117100 11053.8 12928.3 12912.2 9459.7 8563.8 8154.2 11013.7 8823 15143.9 16836.3 TRUE FALSE 10113.61626 12086.66532 12035.75584 10188.28773 8222.685712 8615.883757 10278.99617 8745.861441 16718.1626 18922.10795 0.534486765 0.638758924 0.636068448 0.53843302 0.434554423 0.455334246 0.543226801 0.462203337 0.883525379 1 14.2077852 -8.378248664 4.088262537 0.992095097 0.532794537 0.859749281 0.067011684 0.084933009 2.259598581 0.072618979 0.019166346 4.19E-09 8.378248664 -0.45930056 AEGEPQEES(ph)PLK ddPTM_A459_MK2206_30min_R2 4 AEGEPQEESPLK 12 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEPQEES(1)PLK;AEGEPQEES(1)PLK;AEGEPQEES(1)PLK;AEGEPQEES(1)PLK 142.95 0.00086624 215148000 349408 261841 300931 252948 219526 185795 309557 246158 192408 313326 TRUE FALSE 376158.9451 248838.3567 310963.8893 232281.3393 210906.3062 192865.5589 268911.7941 278331.6958 209143.3 303102.1983 1.241030079 0.820971798 1.025937427 0.766346601 0.695825723 0.636305378 0.887198429 0.918276731 0.690009182 1 18.20944479 -1.924159067 1.029465225 0.802308399 200 0.478312739 0.127573365 670.1513831 2.026316817 0.040419082 313491.7367 0.011908058 1.924159067 199.1976916 AEGEPQEES(ph)PLKSK ddPTM_A459_MK2206_30min_R1 4 AEGEPQEESPLKSK 14 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEPQEES(1)PLKSK;AEGEPQEES(1)PLKSK;AEGEPQEES(0.973)PLKS(0.027)K;AEGEPQEES(0.996)PLKS(0.004)K 151.11 0.0011913 143732000 19971.8 21716.1 23720.6 19343.5 15820.6 13526 17368.2 18825 17231.4 13548.7 TRUE FALSE 18273.09353 20302.37794 22110.51176 20833.33972 15190.432 14291.83043 16209.59907 18660.41501 19022.66569 15227.21524 1.200028583 1.333295525 1.45203909 1.368164788 0.997584375 0.938571512 1.064515002 1.225464716 1.249254403 1 13.89436451 -6.252887 24.82048252 1.082736062 1.346137058 0.579928008 0.107946461 465.7613363 1351719.029 0.035771111 0.045431759 5.59E-07 6.252887 0.263400995 AEGEPQEES(ph)PLKSK ddPTM_A459_MK2206_30min_R2 2 AEGEPQEESPLKSK 14 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEPQEES(0.993)PLKS(0.007)K;AEGEPQEES(0.797)PLKS(0.203)K 94.845 0.0071021 64579000 79683 108435 103009 88925 115135 72419 114315 76581 76657 93814 TRUE FALSE 85783.59175 103050.2756 106443.2686 81659.54304 110614.2214 75174.95579 99305.30318 86590.39964 83324.4873 90752.85686 0.945243981 1.13550448 1.172891657 0.899801349 1.218851122 0.828348092 1.094238866 0.954134147 0.918147265 1 16.46965544 -6.76432072 24.99739924 0.964561164 1.073615278 0.216112068 0.109708365 126.8099617 1100143.617 0.03616192 0.033297136 1.72E-07 6.76432072 0.109054114 AEGEPQEESPLKS(ph)K ddPTM_A459_MK2206_30min_R1 1 AEGEPQEESPLKSK 14 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEPQEES(0.124)PLKS(0.876)K 92.264 0.0087596 19149000 5055.4 6096.8 5999.5 5577.9 4369 3935.3 4150.8 4665.1 4846.5 4212.6 TRUE FALSE 4625.411683 5699.897212 5592.270656 6007.510824 4194.973478 4158.113285 3873.907706 4624.313523 5350.311018 4734.488692 0.976961185 1.203909774 1.181177318 1.268882706 0.886045728 0.878260263 0.818231483 0.976729236 1.130071559 1 12.20899291 -6.270111326 24.99129393 0.937061784 1.162705719 0.485409824 0.105253016 536.5412721 1546231.541 0.033934816 0.039070116 5.37E-07 6.270111326 0.225643935 AEGEWEDQEALDYFS(ph)DKESGK ddPTM_A459_MK2206_30min_R1 5 AEGEWEDQEALDYFSDKESGK 21 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEWEDQEALDYFS(0.99)DKES(0.01)GK;AEGEWEDQEALDY(0.005)FS(0.907)DKES(0.088)GK;AEGEWEDQEALDY(0.007)FS(0.976)DKES(0.017)GK;AEGEWEDQEALDY(0.001)FS(0.995)DKES(0.004)GK;AEGEWEDQEALDY(0.001)FS(0.997)DKES(0.002)GK 112.26 5.25E-05 374843500 27814.3 34106.5 35122.7 29299.3 21996.8 19646.7 24211.2 24921.6 30040.4 32034.6 TRUE FALSE 25448.54773 31886.16065 32738.66898 31555.93716 21120.62088 20759.07918 22596.11502 24703.71308 33163.20708 36003.2881 0.706839544 0.885645793 0.909324418 0.876473756 0.586630333 0.576588425 0.627612538 0.686151582 0.921116066 1 15.13584105 -6.235076301 24.45795495 0.704232455 0.852130077 0.111311811 0.140333244 962.7875986 893211.1338 0.041528319 0.053593206 5.82E-07 6.235076301 0.147897622 AEGEWEDQEALDYFS(ph)DKESGK ddPTM_A459_MK2206_30min_R2 5 AEGEWEDQEALDYFSDKESGK 21 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEWEDQEALDY(0.004)FS(0.987)DKES(0.009)GK;AEGEWEDQEALDY(0.006)FS(0.986)DKES(0.007)GK;AEGEWEDQEALDY(0.114)FS(0.885)DKESGK;AEGEWEDQEALDY(0.446)FS(0.535)DKES(0.02)GK;AEGEWEDQEALDY(0.216)FS(0.761)DKES(0.023)GK 112.88 5.00E-05 148416300 174778.7 180759.4 185202 147871.7 161067 97914.4 178087.7 133371.9 116316.7 185862 TRUE FALSE 188159.8917 171783.151 191376.5422 135790.1091 154742.7003 101640.6011 154704.5711 150804.0653 126433.7163 179797.3382 1.046510997 0.955426553 1.064401421 0.755239819 0.860650674 0.565306484 0.860438606 0.838744704 0.703201269 1 17.45601214 -5.764131028 24.99993724 0.786495196 1.01544437 0.459873524 0.110943366 57.87923505 537588.8682 0.029621062 0.046285538 1.72E-06 5.764131028 0.228949174 AEGFVDALHR ddPTM_A459_MK2206_30min_R2 2 AEGFVDALHR 10 0 Q96I24;A0A494C1K6 Q96I24 FUBP3 Far upstream element-binding protein 3 0 ; 113.44 0.010711 5944900 78140 97052 88756 104143 92903 101573 92117 77808 80477 85685 FALSE TRUE 84122.45848 92232.53881 91715.08074 95634.18376 89255.16142 105438.4317 80021.92725 87977.77275 87476.74399 82889.10547 1.014879555 1.112722092 1.106479316 1.153760596 1.076802083 1.272042099 0.965409468 1.061391268 1.055346701 1 16.33889487 AEGLEEADTGASGCHSHPEEQPT(ph)SISPSR ddPTM_A459_MK2206_30min_R1 1 AEGLEEADTGASGCHSHPEEQPTSISPSR 29 0 Q9BV36;Q9BV36-4;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 AEGLEEADT(0.004)GAS(0.019)GCHS(0.003)HPEEQPT(0.327)S(0.278)IS(0.307)PS(0.061)R 64.668 0.00095329 9413800 745.06 483.29 697.14 568.75 1056.9 976.58 1007.6 792.95 363.61 750.92 TRUE FALSE 681.6887345 451.8277332 649.8200791 612.5552235 1014.801435 1031.873116 940.3848425 786.0173218 401.4085607 843.9496388 0.807736271 0.535372862 0.769974948 0.725819641 1.202443118 1.222671435 1.114266538 0.931355718 0.475630941 1 9.721013101 -6.140681049 7.338527878 1.004929509 0.697693196 0.306198702 0.206844686 0.337773485 18.9554398 0.065325948 0.084636566 7.23E-07 6.140681049 -0.307236312 AEGLEEADTGASGCHSHPEEQPTS(ph)ISPSR ddPTM_A459_MK2206_30min_R1 1 AEGLEEADTGASGCHSHPEEQPTSISPSR 29 0 Q9BV36;Q9BV36-4;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 AEGLEEADT(0.002)GAS(0.002)GCHS(0.004)HPEEQPT(0.129)S(0.409)IS(0.36)PS(0.094)R 45.192 0.024954 8460900 884.82 1461.3 1357.6 1346.2 1035.5 963.22 1015.5 889.03 1222.9 1054.2 TRUE FALSE 809.5614126 1366.169104 1265.449894 1449.884557 994.2538423 1017.756684 947.7578479 881.2573044 1350.024831 1184.802255 0.683288211 1.153077738 1.068068439 1.223735481 0.839172814 0.859009746 0.799929139 0.743801171 1.139451605 1 10.21043058 -6.306136488 24.95878465 0.877341642 1.04326141 0.126183908 0.168579962 748.9046186 418184.8967 0.051427975 0.058314042 4.94E-07 6.306136488 0.165919768 AEGLEEADTGASGCHSHPEEQPTSIS(ph)PSR ddPTM_A459_MK2206_30min_R1 3 AEGLEEADTGASGCHSHPEEQPTSISPSR 29 0 Q9BV36;Q9BV36-4;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 AEGLEEADTGASGCHSHPEEQPT(0.025)S(0.025)IS(0.682)PS(0.268)R;AEGLEEADTGASGCHSHPEEQPT(0.065)S(0.065)IS(0.435)PS(0.435)R;AEGLEEADTGASGCHSHPEEQPT(0.232)S(0.232)IS(0.497)PS(0.039)R 162.55 2.49E-19 72165900 14029.83 8602.92 11292.82 8709.71 18234.11 18102.34 17826.78 15040.25 9860.32 9332.71 TRUE FALSE 12836.51928 8042.868344 10526.29484 9380.533373 17507.80679 19127.27885 16637.58803 14908.75468 10885.33555 10488.91657 1.223817464 0.766796865 1.003563597 0.894328152 1.669172089 1.823570501 1.586206537 1.421381758 1.037794082 1 13.35657805 -6.252298748 24.93900241 1.472276686 0.959705594 0.402180155 0.265091024 598.867939 1633931.022 0.080635088 0.102587387 5.59E-07 6.252298748 -0.512571093 AEGLEEADTGASGCHSHPEEQPTSIS(ph)PSR ddPTM_A459_MK2206_30min_R2 5 AEGLEEADTGASGCHSHPEEQPTSISPSR 29 0 Q9BV36;Q9BV36-4;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 AEGLEEADTGASGCHSHPEEQPT(0.018)S(0.018)IS(0.482)PS(0.482)R;AEGLEEADTGASGCHSHPEEQPT(0.006)S(0.006)IS(0.699)PS(0.288)R;AEGLEEADTGASGCHSHPEEQPT(0.002)S(0.004)IS(0.497)PS(0.497)R;AEGLEEADTGASGCHSHPEEQPT(0.002)S(0.006)IS(0.95)PS(0.042)R;AEGLEEADT(0.001)GAS(0.001)GCHS(0.001)HPEEQPT(0.024)S(0.034)IS(0.47)PS(0.47)R 140.79 2.41E-14 254603000 351799 616152 499046 787235 678398 900072 789421 607137 770486 758724 TRUE FALSE 378733.0019 585554.7876 515683.9446 722915.3823 651760.6858 934324.8707 685769.0744 686491.8905 837501.4796 733966.898 0.516008287 0.797794545 0.702598368 0.98494276 0.887997385 1.272979576 0.934332429 0.935317236 1.14106165 1 19.48535547 -5.364901087 0.849852134 1.044031587 0.500838101 0.65353274 0.119313058 0.741334446 0.72759174 0.047375785 0.321855151 4.32E-06 5.364901087 -0.543193486 AEGNDHIER ddPTM_A459_MK2206_30min_R2 1 AEGNDHIER 9 0 A0A087WTD5;A0A0G2JP90;A0A087WW46;J3KN36;A0A0G2JN29;A0A087X117;Q5JPE7-3;Q5JPE7-2;Q15155;P69849;Q5JPE7 A0A087WTD5 NOMO2;NOMO1;NOMO3 Nodal modulator 2;Nodal modulator 1;Nodal modulator 3 0 134.84 0.0039131 2357900 21871 21983 16870 20527 26879 22189 21660 22013 25661 20595 FALSE TRUE 23545.46058 20891.35619 17432.43738 18849.87844 25823.5954 23033.41794 18816.01598 24890.17468 27892.9474 19922.98684 1.181823828 1.048605631 0.874991161 0.946137173 1.296170881 1.156122731 0.944437505 1.249319436 1.400038439 1 14.28214633 -6.247947508 24.93827218 1.174407336 1.005590724 0.23022016 0.14439021 1205.150677 2227589.814 0.04468379 0.057354827 5.65E-07 6.247947508 -0.168816612 AEGSSTASSGS(ph)QLAEGK ddPTM_A459_MK2206_30min_R1 1 AEGSSTASSGSQLAEGK 17 0 Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A0C4DH52;Q9NZB2-2;Q9NZB2-5 Q9NZB2-4 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 AEGS(0.006)S(0.001)T(0.013)AS(0.269)S(0.195)GS(0.516)QLAEGK 131.82 0.00075412 4319300 1062.6 1044 952.01 968.85 1144.1 1066.6 1220.2 1067.1 1059.2 1057.5 TRUE FALSE 972.2202901 976.0354102 887.3902137 1043.470995 1098.528074 1126.98997 1138.802684 1057.770457 1169.30763 1188.511084 0.818015333 0.821225333 0.746640251 0.877964883 0.924289297 0.94823682 0.958175906 0.889996292 0.983842428 1 10.21493964 -6.067861788 2.736724656 0.946338241 0.798174789 0.795402775 0.035113467 0.119326594 1.760317555 0.010541988 0.015054411 8.55E-07 6.067861788 -0.148163451 AEGSSTASSGS(ph)QLAEGK ddPTM_A459_MK2206_30min_R2 1 AEGSSTASSGSQLAEGK 17 0 Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A0C4DH52;Q9NZB2-2;Q9NZB2-5 Q9NZB2-4 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 AEGSSTAS(0.046)S(0.188)GS(0.765)QLAEGK 239.58 1.53E-22 5861200 11204 16344 15653 15997 16356 12861 19382 13278 15914 16318 TRUE FALSE 12061.78685 15532.38073 16174.86321 14689.99393 15713.78126 13350.43437 16837.12012 15013.48019 17298.17095 15785.545 0.764103289 0.983962272 1.024662957 0.930597831 0.995453832 0.845737944 1.066616333 0.951090393 1.095823486 1 13.94631645 -4.761448544 12.15859738 0.984267146 0.763826569 0.503697063 0.066634919 0.048627712 415.9636451 0.015780078 0.088263211 1.73E-05 4.761448544 -0.220440577 AEGYEVAHGGR ddPTM_A459_MK2206_30min_R1 2 AEGYEVAHGGR 11 0 A8MU39;H0YDU8;P53041 A8MU39 PPP5C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 5 0 ; 136.49 0.0019828 7828900 9677.2 9670.2 10299.4 8334.4 10551.6 9205 10365.9 9861.8 8314.8 7654.1 FALSE TRUE 8854.103323 9040.668222 9600.305424 8976.316932 10131.30743 9726.179145 9674.409725 9775.579322 9179.153215 8602.347694 1.029265921 1.050953594 1.116009927 1.043472928 1.177737496 1.130642412 1.124624355 1.136385051 1.067052105 1 13.07051473 -6.220352406 24.99994842 1.115048867 1.063290755 0.156269134 0.049741165 820.7513878 499397.3909 0.014158427 0.018278394 6.02E-07 6.220352406 -0.051758112 AEGYEVAHGGR ddPTM_A459_MK2206_30min_R2 2 AEGYEVAHGGR 11 0 A8MU39;H0YDU8;P53041 A8MU39 PPP5C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 5 0 ; 138.25 0.0017795 9369500 62499 76774 75609 82672 79401 85466 80840 57346 81401 75351 FALSE TRUE 67283.97149 72961.5148 78129.76632 75917.43315 76283.31778 88718.46852 70225.61089 64841.3191 88481.11184 72892.30304 0.923060031 1.000949507 1.071852076 1.041501365 1.046520889 1.2171171 0.963415998 0.889549601 1.213860835 1 16.15347886 -4.88189687 2.593172871 1.053106406 0.910193022 0.155950488 0.095411893 0.766787425 7.96830002 0.024902795 0.220624937 1.31E-05 4.88189687 -0.142913383 AEHENLFR ddPTM_A459_MK2206_30min_R2 1 AEHENLFR 8 0 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 0 136.8 0.0033246 0 15816 14726 14709 18871 15767 16928 17479 13481 13856 17007 FALSE TRUE 17026.88512 13994.72825 15199.39072 17329.17893 15147.90836 17572.2069 15183.9863 15243.01299 15061.16983 16452.06298 1.034939213 0.850636681 0.923859259 1.053313433 0.920730025 1.068085317 0.922922938 0.926510736 0.915457827 1 14.00598088 AEHMETNAVGPS(ph)PSSDTR ddPTM_A459_MK2206_30min_R1 7 AEHMETNAVGPSPSSDTR 18 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 AEHMETNAVGPS(0.831)PS(0.141)S(0.025)DT(0.003)R;AEHMET(0.056)NAVGPS(0.902)PS(0.031)S(0.01)DTR;AEHMETNAVGPS(0.637)PS(0.321)S(0.042)DTR;AEHMETNAVGPS(0.982)PS(0.013)S(0.005)DTR;AEHMETNAVGPS(0.697)PS(0.145)S(0.145)DT(0.013)R;AEHMETNAVGPS(0.996)PS(0.004)SDTR;AEHMETNAVGPS(0.773)PS(0.226)S(0.001)DTR 305.85 2.31E-96 67896100 16964.6 16647.87 15655.78 14290.93 14891.31 12782.91 13603.66 13138.19 12070.37 11136.13 TRUE FALSE 15521.67169 15564.09064 14593.10927 15391.6199 14298.15759 13506.66732 12696.18466 13023.32419 13325.12816 12515.75786 1.240170341 1.243559584 1.165978875 1.229779297 1.142412449 1.079172949 1.014415971 1.040554183 1.064668101 1 13.61145803 -6.6501766 1.625665078 1.032067984 1.221153241 0.913139133 0.026512004 0.101808694 0.555520804 0.011014668 0.010941413 2.24E-07 6.6501766 0.189085258 AEHMETNAVGPS(ph)PSSDTR ddPTM_A459_MK2206_30min_R2 6 AEHMETNAVGPSPSSDTR 18 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 AEHMET(0.003)NAVGPS(0.637)PS(0.18)S(0.18)DTR;AEHMETNAVGPS(0.869)PS(0.055)S(0.055)DT(0.022)R;AEHMET(0.018)NAVGPS(0.947)PS(0.033)S(0.002)DTR;AEHMETNAVGPS(0.969)PS(0.023)S(0.007)DT(0.002)R;AEHMETNAVGPS(0.911)PS(0.082)S(0.008)DTR;AEHMETNAVGPS(0.908)PS(0.09)S(0.003)DTR 310.98 1.63E-111 62179300 104247.4 94277.1 83675.5 102984.7 103094.4 95638.5 110961.4 75666.1 76441.2 106770.7 TRUE FALSE 112228.6611 89595.43631 86465.19941 94570.52058 99046.39585 99278.09013 96392.03489 85555.91907 83089.9174 103286.7808 1.086573327 0.8674434 0.837137132 0.915611077 0.958945521 0.961188735 0.933246579 0.828333678 0.80445839 1 16.6562961 -7.743213139 24.0664182 0.862297038 0.93156784 0.094727166 0.078994369 306.4805042 404686.4182 0.037165814 0.02139636 1.81E-08 7.743213139 0.069270802 AEHS(ph)YLR ddPTM_A459_MK2206_30min_R1 1 AEHSYLR 7 0 H3BTE0;P98161-2;P98161-3;P98161 H3BTE0 PKD1 Polycystin-1 1 AEHS(0.999)Y(0.001)LR 76.478 0.034583 2399300 0 0 0 157.72 0 0 50.864 0 56.104 0 TRUE FALSE 0 0 0 169.8676217 0 0 47.47095537 0 61.93621157 0 0 AEISFEDRK ddPTM_A459_MK2206_30min_R2 2 AEISFEDRK 9 1 P21333-2;P21333;Q60FE5;H0Y5C6 P21333-2 FLNA Filamin-A 0 ; 106.68 0.017624 28685000 160307 213763 180257 175700 192352 170776 198305 156322 147801 172121 FALSE TRUE 172580.2272 203147.8403 186266.6784 161344.748 184799.294 177275.0003 172267.3153 176753.8221 160656.4638 166504.7059 1.036488586 1.220072665 1.118687171 0.969010138 1.109874301 1.064684625 1.034609289 1.061554514 0.964876416 1 17.34520343 -6.388825238 0.352567333 0.991052064 1.152590708 0.280986082 0.062116844 2.93089417 0.645975768 0.070305671 0.183309059 4.08E-07 6.388825238 0.161538644 AEISS(ph)IR ddPTM_A459_MK2206_30min_R1 1 AEISSIR 7 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 AEIS(0.075)S(0.925)IR 91.069 0.028821 11075000 4070.3 5098.9 4904.5 4246 4948.5 4856.9 6155.1 4169.1 5277.8 5936.5 TRUE FALSE 3724.099611 4766.960683 4571.596205 4573.027656 4751.390766 5131.893481 5744.50451 4132.649998 5826.446197 6671.958438 0.558171884 0.714476975 0.685195546 0.685410093 0.71214334 0.769173479 0.86099225 0.619405837 0.873273755 1 12.70389459 -14.52287875 0.071018234 1.983913452 0.376094655 0.663324936 0.072298408 190.0629055 0.966614487 30.27505452 3.642537746 3.00E-15 14.52287875 -1.607818797 AEISS(ph)IR ddPTM_A459_MK2206_30min_R2 2 AEISSIR 7 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 AEIS(0.028)S(0.972)IR;AEIS(0.089)S(0.911)IR 90.37 0.029739 30614900 118867 142623 156122 164016 144030 158436 139840 113189 119308 118386 TRUE FALSE 127967.5489 135540.5492 161327.0296 150615.3681 138374.6585 164465.393 121478.84 127983.1909 129685.1942 114523.0745 1.117395332 1.183521747 1.408685806 1.315153027 1.208268806 1.436089571 1.060736804 1.117531916 1.132393579 1 16.80527878 -7.290708807 24.97369558 1.087459866 1.278316937 0.504714525 0.097118748 652.0557501 556353.9834 0.041671438 0.028099935 5.12E-08 7.290708807 0.190857071 AEITFDDHK ddPTM_A459_MK2206_30min_R1 1 AEITFDDHK 9 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7 O75369-8 FLNB Filamin-B 0 145.9 0.00064658 0 5412.2 5186.2 5364 4125.2 5381.3 4614.1 4540.1 4671.5 4760.1 4716.5 FALSE TRUE 4951.863969 4848.577437 4999.906625 4442.923619 5166.951426 4875.346355 4237.238213 4630.657568 5254.929429 5300.815628 0.934170195 0.914685169 0.943233452 0.838158489 0.97474649 0.919735131 0.799355894 0.873574539 0.991343559 1 12.37199865 -8.273774888 22.85175703 0.995671893 0.899429759 0.381194767 0.048906252 296.4423377 549147.3892 0.047294377 0.012663639 5.32E-09 8.273774888 -0.096242135 AEITFDDHK ddPTM_A459_MK2206_30min_R2 4 AEITFDDHK 9 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7 O75369-8 FLNB Filamin-B 0 ;;; 150.61 0.0018288 39753000 163742 176990 182019 177179 180011 143010 206355 156369 148956 175219 FALSE TRUE 176278.2134 168200.934 188087.4226 162702.9089 172942.8637 148452.3458 179260.3406 176806.9652 161911.9236 169501.6184 1.03997953 0.992326419 1.109649716 0.959890003 1.020302138 0.875816686 1.057573033 1.04309898 0.955223467 1 17.37093952 -5.793986164 24.99992229 0.988854329 1.041819591 0.195488923 0.055298569 340.914393 261862.9568 0.015576246 0.02310554 1.61E-06 5.793986164 0.052965263 AELEEMEEVHPS(ph)DEEEEDATKAEGFYQK ddPTM_A459_MK2206_30min_R1 1 AELEEMEEVHPSDEEEEDATKAEGFYQK 28 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 AELEEMEEVHPS(1)DEEEEDATKAEGFYQK 78.122 3.50E-05 4905500 665.83 664.31 571.94 554.34 626.33 535.35 703.12 558.08 804.53 467.28 TRUE FALSE 609.1976621 621.0632983 533.1183063 597.0353629 601.3819498 565.6610544 656.2161477 553.2007654 888.1637725 525.1701742 1.160000495 1.182594383 1.015134394 1.136841718 1.145118248 1.077100495 1.249530495 1.053374301 1.691192334 1 9.036641174 AELGMGDSTSQS(ph)PPIK ddPTM_A459_MK2206_30min_R2 1 AELGMGDSTSQSPPIK 16 0 Q9NR19;Q9NR19-2 Q9NR19 ACSS2 "Acetyl-coenzyme A synthetase, cytoplasmic" 1 AELGMGDS(0.103)T(0.025)S(0.133)QS(0.74)PPIK 100.23 0.0092978 0 12483 11248 8614.6 9089.1 10249 8626.9 12542 11204 7702.1 13160 TRUE FALSE 13438.70808 10689.44068 8901.806464 8346.491455 9846.572763 8955.202725 10895.22033 12668.40127 8372.014736 12730.59028 1.055623328 0.839665753 0.699245382 0.655624859 0.773457675 0.703439709 0.855829942 0.995114994 0.657629737 1 13.63601169 -9.867178933 8.429858175 0.999999943 0.800859617 0.169258284 0.130131566 0 0 0.129582741 0.031428431 1.36E-10 9.867178933 -0.199140327 AELGMGDSTSQS(ph)PPIKR ddPTM_A459_MK2206_30min_R1 5 AELGMGDSTSQSPPIKR 17 1 Q9NR19;Q9NR19-2 Q9NR19 ACSS2 "Acetyl-coenzyme A synthetase, cytoplasmic" 1 AELGMGDS(0.004)T(0.004)S(0.01)QS(0.982)PPIKR;AELGMGDS(0.029)T(0.029)S(0.025)QS(0.917)PPIKR;AELGMGDS(0.062)T(0.048)S(0.029)QS(0.861)PPIKR;AELGMGDS(0.001)T(0.006)S(0.025)QS(0.969)PPIKR;AELGMGDS(0.001)T(0.015)S(0.036)QS(0.948)PPIKR 114.06 0.0016825 51888800 8876.9 8149.8 9423.7 7793.23 8041.2 7591.06 8481.4 7491.62 7799.23 6859.75 TRUE FALSE 8121.873041 7619.246539 8784.0455 8393.465925 7720.901976 8020.859257 7915.621281 7426.121556 8609.987868 7709.587618 1.053476975 0.988281983 1.139366453 1.088704914 1.00146757 1.040374616 1.026724343 0.963232007 1.116789677 1 12.91243798 -6.260979553 24.99980311 1.02380478 1.066938529 0.145016994 0.050746035 88.06202214 4787842.862 0.015337556 0.018642769 5.48E-07 6.260979553 0.043133749 AELGMGDSTSQS(ph)PPIKR ddPTM_A459_MK2206_30min_R2 2 AELGMGDSTSQSPPIKR 17 1 Q9NR19;Q9NR19-2 Q9NR19 ACSS2 "Acetyl-coenzyme A synthetase, cytoplasmic" 1 AELGMGDS(0.041)T(0.049)S(0.181)QS(0.729)PPIKR;AELGMGDS(0.004)T(0.01)S(0.029)QS(0.957)PPIKR 86.189 0.0058081 27999000 36943 45159 43648 47686 46753 42970 51076 41432 40783 44400 TRUE FALSE 39771.38448 42916.46973 45103.20254 43789.90126 44917.24231 44605.25346 44369.65985 46847.30466 44330.23162 42951.23164 0.925966101 0.999190666 1.050102659 1.01952609 1.045773092 1.038509299 1.033024157 1.090709227 1.03210618 1 15.39041188 -4.802435943 2.061764217 1.041604714 0.895676724 0.703666717 0.022300884 0.349023247 1.723445794 0.005810696 0.095486037 1.58E-05 4.802435943 -0.145927991 AELGSWS(ph)SQEHLEWEPACQTPQPSAR ddPTM_A459_MK2206_30min_R1 1 AELGSWSSQEHLEWEPACQTPQPSAR 26 0 B7Z896;F5H3M2;Q9BVG8-5;Q9BVG8-2;Q9BVG8;Q9BVG8-6;H3BTL6 B7Z896 KIFC3 Kinesin-like protein;Kinesin-like protein KIFC3 1 AELGS(0.03)WS(0.485)S(0.485)QEHLEWEPACQTPQPSAR 119.43 5.12E-09 13202000 1644.3 1289 1411.1 1128 1577.9 1474 1474.4 1583.3 1383.5 1298.4 TRUE FALSE 1504.44365 1205.085866 1315.318464 1214.878755 1515.048902 1557.456606 1376.045466 1569.457375 1527.319776 1459.255594 1.030966512 0.825822337 0.901362632 0.832533218 1.038234088 1.067295279 0.942977688 1.075519176 1.046643084 1 10.51101688 -6.275602118 24.44757314 1.029890015 0.892802791 0.508552954 0.062896678 454.0034389 783694.4486 0.018838678 0.021466832 5.30E-07 6.275602118 -0.137087224 AELGSWS(ph)SQEHLEWEPACQTPQPSAR ddPTM_A459_MK2206_30min_R2 3 AELGSWSSQEHLEWEPACQTPQPSAR 26 0 B7Z896;F5H3M2;Q9BVG8-5;Q9BVG8-2;Q9BVG8;Q9BVG8-6;H3BTL6 B7Z896 KIFC3 Kinesin-like protein;Kinesin-like protein KIFC3 1 AELGS(0.136)WS(0.432)S(0.432)QEHLEWEPACQTPQPSAR;AELGS(0.042)WS(0.479)S(0.479)QEHLEWEPACQTPQPSAR;AELGS(0.008)WS(0.496)S(0.496)QEHLEWEPACQTPQPSAR 102.24 7.06E-07 58525000 40548.2 47366 39384.9 47052.8 46396.4 52856.4 53930.1 42718.3 40324 41938.8 TRUE FALSE 43652.60137 45013.87332 40697.97291 43208.43573 44574.64421 54867.88734 46849.01309 48301.72848 43831.30863 40570.34039 1.075973259 1.109526637 1.003145956 1.065025221 1.098700277 1.352413778 1.154760168 1.190567494 1.080378134 1 15.30813779 -6.53675006 24.99278205 1.173933352 1.064838168 0.183807687 0.087995438 325.0337392 585629.2528 0.028343528 0.028355628 2.91E-07 6.53675006 -0.109095184 AELGSWSS(ph)QEHLEWEPACQTPQPSAR ddPTM_A459_MK2206_30min_R1 3 AELGSWSSQEHLEWEPACQTPQPSAR 26 0 B7Z896;F5H3M2;Q9BVG8-5;Q9BVG8-2;Q9BVG8;Q9BVG8-6;H3BTL6 B7Z896 KIFC3 Kinesin-like protein;Kinesin-like protein KIFC3 1 AELGS(0.041)WS(0.418)S(0.541)QEHLEWEPACQTPQPSAR;AELGS(0.028)WS(0.458)S(0.514)QEHLEWEPACQTPQPSAR;AELGS(0.009)WS(0.197)S(0.794)QEHLEWEPACQTPQPSAR 179.55 1.06E-21 88774000 5430.9 4340.3 4647.8 3922.3 5916.4 5793.9 6103.9 5380.9 4989.3 5139.2 TRUE FALSE 4968.973436 4057.745681 4332.320286 4224.396226 5680.73726 6121.945611 5696.719968 5333.855359 5507.955589 5775.882895 0.860296777 0.70253254 0.750070658 0.731385366 0.983527084 1.05991512 0.986294229 0.923470135 0.953612753 1 12.49582578 -6.265384465 24.87620721 0.984506882 0.756104225 0.827294026 0.049983965 126.5514592 797984.3969 0.015862406 0.018662481 5.43E-07 6.265384465 -0.228402657 AELGSWSS(ph)QEHLEWEPACQTPQPSAR ddPTM_A459_MK2206_30min_R2 1 AELGSWSSQEHLEWEPACQTPQPSAR 26 0 B7Z896;F5H3M2;Q9BVG8-5;Q9BVG8-2;Q9BVG8;Q9BVG8-6;H3BTL6 B7Z896 KIFC3 Kinesin-like protein;Kinesin-like protein KIFC3 1 AELGS(0.147)WS(0.402)S(0.451)QEHLEWEPACQTPQPSAR 54.017 0.0081593 26307000 15718 19267 14491 20529 17007 22905 21092 14716 20194 18612 TRUE FALSE 16921.38217 18310.2288 14974.12271 18851.71503 16339.21973 23776.66583 18322.59506 16639.43173 21950.43762 18004.69196 0.939831806 1.016969845 0.831678917 1.047044574 0.907497877 1.32058165 1.017656681 0.924171975 1.219150967 1 14.1360853 AELPGS(ph)SSPLLAQPR ddPTM_A459_MK2206_30min_R2 1 AELPGSSSPLLAQPR 15 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 AELPGS(0.451)S(0.451)S(0.098)PLLAQPR 111.81 0.0031633 14476000 35588 38720 37144 40218 35459 40633 40994 31631 33942 43402 TRUE FALSE 38312.64464 36797.2211 38382.36242 36932.06075 34066.70149 42179.31729 35611.43856 35765.28031 36894.21381 41985.79629 0.912514422 0.876420703 0.914174931 0.879632257 0.811386338 1.004609201 0.848178234 0.851842372 0.878730834 1 15.35761373 AELPGSS(ph)SPLLAQPR ddPTM_A459_MK2206_30min_R2 1 AELPGSSSPLLAQPR 15 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 AELPGS(0.249)S(0.376)S(0.376)PLLAQPR 81.128 0.027871 15938000 61677 82333 67680 80685 77301 88782 79966 57924 70338 89211 TRUE FALSE 66399.03854 78244.46294 69936.41742 74092.7774 74265.77433 92160.66122 69466.36814 65494.86568 76455.8721 86300.05238 0.76939743 0.906656031 0.810386732 0.858548464 0.860553062 1.067909679 0.804940046 0.758920347 0.885930773 1 16.39707381 -4.75084501 24.57182238 0.875712303 0.769397151 0.127024206 0.087687002 862.6283778 2000552.45 0.022071761 0.304278852 1.77E-05 4.75084501 -0.106315151 AELPGSSS(ph)PLLAQPR ddPTM_A459_MK2206_30min_R2 1 AELPGSSSPLLAQPR 15 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 AELPGS(0.074)S(0.379)S(0.547)PLLAQPR 127.66 0.0010369 3604500 19790 25190 21593 27542 30167 26390 30020 24053 27034 32333 TRUE FALSE 21305.13762 23939.10123 22312.89984 25291.7305 28982.492 27394.28994 26078.33794 27196.80969 29385.36845 31277.97686 0.681154594 0.765366038 0.71337414 0.808611459 0.926610188 0.87583318 0.833760382 0.869519464 0.939490703 1 14.93285958 -2.475441648 0.170140569 1.008300988 3.15E-20 0.809921271 0.042043659 20.64187214 0.297487698 0.125800105 4.974012991 0.00334625 2.475441648 -1.008300988 AEMYDDVHSDGR ddPTM_A459_MK2206_30min_R1 1 AEMYDDVHSDGR 12 0 M0R3F6;M0R2Z9;Q8IX01-4;Q8IX01-3;Q8IX01;M0R065;M0R216 M0R3F6 SUGP2 SURP and G-patch domain-containing protein 2 0 116.71 0.0078506 0 1677.2 1314.8 1303.5 1264.5 1487.2 1509.9 1731.4 1289 1106.2 1276.7 FALSE TRUE 1534.545333 1229.206281 1215.022052 1361.892009 1427.961675 1595.389233 1615.901465 1277.730409 1221.193449 1434.867235 1.069468516 0.856669001 0.846783607 0.949141479 0.995187318 1.11187237 1.126167931 0.890486853 0.851084629 1 10.48670154 -4.414247418 11.57910769 0.962575477 3.005426003 0.10413494 0.096926592 763621.3899 1891140.881 0.026974347 38499110.13 3.85E-05 4.414247418 2.042850527 AENGERS(ph)DLEEDNER ddPTM_A459_MK2206_30min_R1 3 AENGERSDLEEDNER 15 1 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 AENGERS(1)DLEEDNER;AENGERS(1)DLEEDNER;AENGERS(1)DLEEDNER 295.98 2.28E-67 39101800 5618.9 5867 5428.2 4489.4 4736 4760 5677.4 4948.2 5991.6 6908 TRUE FALSE 5140.983049 5485.057234 5059.748908 4835.174366 4547.355091 5029.507086 5298.671005 4904.938409 6614.448261 7763.815193 0.66217226 0.706489928 0.651709087 0.62278329 0.585711403 0.64781386 0.682482887 0.631769084 0.851958489 1 12.92255006 -8.461160255 2.749548846 0.998792157 0.648261421 0.92690605 0.032377951 0.063783468 1.03655779 0.034149872 0.009223373 3.46E-09 8.461160255 -0.350530736 AENGERS(ph)DLEEDNER ddPTM_A459_MK2206_30min_R2 2 AENGERSDLEEDNER 15 1 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 AENGERS(1)DLEEDNER;AENGERS(1)DLEEDNER 120.74 0.00096587 35125000 19817.7 13638.8 15056.5 12107.7 15106.9 13594.4 17743.9 16043.6 10816.3 14574.9 TRUE FALSE 21334.95835 12961.51702 15558.4762 11118.46218 14513.7272 14111.74442 15414.10462 18140.55361 11757.08222 14099.32221 1.513190353 0.919300718 1.103491073 0.788581324 1.029391838 1.00088105 1.093251462 1.286625934 0.833875703 1 13.78333819 -4.754712461 24.99981282 1.014638117 1.513191199 0.559656352 0.134736593 177.0803329 658039.2685 0.033186423 0.315904078 1.76E-05 4.754712461 0.498553082 AENGLLMT(ph)PCYTANFVAPEVLKR ddPTM_A459_MK2206_30min_R1 2 AENGLLMTPCYTANFVAPEVLKR 23 1 B4DG22;B1AXG1;B7ZB17;P51812;A0A2R8Y603;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2 B4DG22;E9PGT3 RPS6KA3;RPS6KA1 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 1 AENGLLMT(0.973)PCY(0.025)T(0.002)ANFVAPEVLKR;AENGLLMT(0.974)PCY(0.025)T(0.001)ANFVAPEVLKR 88.872 0.0002524 19864300 3192.1 3847.3 3212.3 2865.6 3067.2 2122.7 1661.06 1940.67 1406.74 880.8 TRUE FALSE 2920.595133 3596.840071 2994.258026 3086.309009 2945.026929 2242.88544 1550.253718 1923.702927 1552.975657 989.9201537 2.950334046 3.633464838 3.024747011 3.117735301 2.975014619 2.265723585 1.566039152 1.943291001 1.568788807 1 9.951168353 -7.022657106 0.833204328 1.344570848 3.315493447 0.896310779 0.262257959 0.184587111 0.265431665 0.19040315 0.139076703 9.49E-08 7.022657106 1.970922599 AENNS(ph)EVGASGYGVPGPTWDR ddPTM_A459_MK2206_30min_R1 1 AENNSEVGASGYGVPGPTWDR 21 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 1 AENNS(1)EVGASGYGVPGPTWDR 214.05 3.49E-42 0 426.24 265.03 300.94 341.97 434.63 226.52 431.79 328.74 195.75 284.8 TRUE FALSE 389.9860497 247.7764988 280.5130313 368.3085887 417.3177668 239.3453666 402.9860769 325.8658608 216.098913 320.0831741 1.218389723 0.774100355 0.876375436 1.15066526 1.303779144 0.747759914 1.259004251 1.0180662 0.675133623 1 8.32230303 -8.095348022 9.863443335 0.839024725 1.039930481 0.146571781 0.199318294 0.89165358 87.00930444 0.13294985 0.050154836 8.03E-09 8.095348022 0.200905756 AENNS(ph)EVGASGYGVPGPTWDR ddPTM_A459_MK2206_30min_R2 1 AENNSEVGASGYGVPGPTWDR 21 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 1 AENNS(0.541)EVGAS(0.142)GY(0.159)GVPGPT(0.159)WDR 123.84 7.16E-05 4985300 9688.3 12915 8176.9 9917.8 11951 14761 12259 7301.5 9766 9792.7 TRUE FALSE 10430.0437 12273.65988 8449.513765 9107.484015 11481.74369 15322.7402 10649.37857 8255.83112 10615.42903 9473.165001 1.101009398 1.295623995 0.891942003 0.961398225 1.21202826 1.617489002 1.124162682 0.871496603 1.120578922 1 13.2096308 -7.53766089 23.67636909 0.997188395 1.180879849 0.151353077 0.193347382 270.9895204 434030.3513 0.098697869 0.057019809 2.90E-08 7.53766089 0.183691454 AENSHNAGQVDTR ddPTM_A459_MK2206_30min_R1 1 AENSHNAGQVDTR 13 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;E9PDP5;D6RHC4;Q8IWZ3-5;Q8IWZ3-3;Q8IWZ3-2 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 0 128.35 0.0025777 429200 303.96 385.97 380.15 314.13 372.41 229.94 411.94 306.1 0 247.17 FALSE TRUE 278.1066058 360.8432828 354.3464772 338.324347 357.5761211 242.9590041 384.4602342 303.4238 0 277.7912856 1.001135098 1.298972651 1.275585288 1.217908424 1.287211441 0.874609884 1.383989542 1.092272565 0 1 8.117857532 -8.095988729 8.064595048 0.504913489 1.194532644 0.514916239 0.265061246 0.216396634 16.301604 0.163685199 0.061510463 8.02E-09 8.095988729 0.689619155 AENSHNAGQVDTR ddPTM_A459_MK2206_30min_R2 2 AENSHNAGQVDTR 13 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;E9PDP5;D6RHC4;Q8IWZ3-5;Q8IWZ3-3;Q8IWZ3-2 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 0 ; 120.6 0.0042192 2676400 7931.7 14138.5 12291.7 13825.3 14271.7 13832.8 13160.1 10794.5 10641.9 12662.4 FALSE TRUE 8538.95705 13436.40265 12701.49914 12695.72877 13711.32135 14359.2169 11432.16306 12205.37821 11567.51323 12249.22693 0.697101711 1.09691842 1.036922511 1.03645143 1.11936218 1.17225495 0.9332967 0.996420287 0.94434639 1 13.58040308 -4.755703948 24.99994479 1.040707091 0.697101161 0.670593797 0.071501332 117.3863009 511618.5056 0.018911063 0.163270738 1.76E-05 4.755703948 -0.34360593 AENYDIPSADR ddPTM_A459_MK2206_30min_R1 2 AENYDIPSADR 11 0 P22314;P22314-2;Q5JRR6 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 0 ; 178.53 0.00081123 14969100 4055.9 4008.7 3851.3 3594.6 4038.3 3900 4229.8 3616.3 3348.2 3109.6 FALSE TRUE 3710.924407 3747.732901 3589.884486 3871.456715 3877.44596 4120.81463 3947.63776 3584.68307 3696.257372 3494.840724 1.061829336 1.072361574 1.027195449 1.107763421 1.10947716 1.179113715 1.129561566 1.025707136 1.057632568 1 11.77101099 -7.775425049 24.98770693 1.031252355 1.098377614 0.386224429 0.040601651 303.5561209 542344.8136 0.024844612 0.012029368 1.68E-08 7.775425049 0.067125259 AEPSEVDMNS(ph)PK ddPTM_A459_MK2206_30min_R1 2 AEPSEVDMNSPK 12 0 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK 186.29 0.00010438 322820000 10802.1 13212.5 12025.1 11847.8 7140.1 6004 7537.9 7800.5 10572.3 8962.1 TRUE FALSE 9883.324671 12352.36385 11208.86972 12760.31961 6855.694698 6343.941291 7035.060445 7732.301051 11671.32842 10072.39261 0.981229094 1.226358456 1.112830898 1.266860825 0.680642124 0.629834592 0.698449784 0.767672722 1.158744389 1 13.2981188 -6.261667445 24.99989432 0.795099393 1.150073374 0.474804406 0.16555434 17.38640244 1905843.001 0.051223738 0.061804525 5.47E-07 6.261667445 0.354973981 AEPSEVDMNS(ph)PK ddPTM_A459_MK2206_30min_R2 6 AEPSEVDMNSPK 12 0 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK 196.37 0.00010412 473629000 879784 775749 752612 624884 682249 474142 938880 630826 458026 904629 TRUE FALSE 947140.9395 737226.4327 777703.7084 573828.9783 655460.4762 492185.8061 815603.9282 713277.1241 497864.2736 875111.0298 1.082309452 0.842437597 0.888691471 0.655721341 0.749002645 0.562426697 0.932000512 0.815070431 0.568915551 1 19.73910655 -4.387673813 1.12502848 0.751943476 1.536037816 0.317396278 0.138087007 4.089200637 2.381506167 0.041124798 4.695517099 4.10E-05 4.387673813 0.78409434 AEPYVAS(ph)EYK ddPTM_A459_MK2206_30min_R1 1 AEPYVASEYK 10 0 Q6ZSL5;A0A088AWN3;A0A0A0MSY4;Q9BZ29-3;Q9BZ29-5;Q9BZ29;Q9BZ29-4;A0A0A0MT38;Q9BZ29-6 Q6ZSL5 DOCK9 Dedicator of cytokinesis protein 9 1 AEPYVAS(1)EYK 130.1 0.0028366 6686800 3806 3218.7 4443 3562.1 2974.7 2687.1 3568.8 3283.2 4423.6 3209.2 TRUE FALSE 3482.279714 3009.162045 4141.421539 3836.453559 2856.2114 2839.24128 3330.731864 3254.495329 4883.44905 3606.779924 0.965481617 0.834307085 1.148232392 1.063678306 0.791900659 0.787195598 0.923464124 0.902327116 1.353963689 1 11.81649568 -8.236469735 24.65331743 1.176981883 0.926617943 0.358555753 0.133702164 614.2979296 606517.8209 0.092645834 0.034981645 5.80E-09 8.236469735 -0.250363941 AEPYVAS(ph)EYK ddPTM_A459_MK2206_30min_R2 4 AEPYVASEYK 10 0 Q6ZSL5;A0A088AWN3;A0A0A0MSY4;Q9BZ29-3;Q9BZ29-5;Q9BZ29;Q9BZ29-4;A0A0A0MT38;Q9BZ29-6 Q6ZSL5 DOCK9 Dedicator of cytokinesis protein 9 1 AEPYVAS(1)EYK;AEPYVAS(1)EYK;AEPYVAS(1)EYK;AEPYVAS(1)EYK 134.49 0.0032624 0 97140 100202 96301 73994 79295 77463 87152 92532 93723 72669 TRUE FALSE 104577.1131 95226.11439 99511.62728 67948.4535 76181.47987 80410.90875 75708.83771 104626.2501 101874.8571 70297.81648 1.487629607 1.354609846 1.415572094 0.966579858 1.083696247 1.143860688 1.076972821 1.48832859 1.449189494 1 16.10119226 -5.701313077 24.99546341 1.184113985 1.412805993 0.314414353 0.16619475 104.832574 43579.2354 0.049003668 0.084876813 1.99E-06 5.701313077 0.228692008 AEQGS(ph)EEEGEGEEEEEEGGESKADDPYAHLSK ddPTM_A459_MK2206_30min_R2 1 AEQGSEEEGEGEEEEEEGGESKADDPYAHLSK 32 1 Q5STZ8;Q8NE71 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 AEQGS(0.819)EEEGEGEEEEEEGGES(0.17)KADDPY(0.009)AHLS(0.002)K 47.167 0.0076319 11111000 16408 40264 24265 47216 52673 43521 54114 31258 43782 27157 TRUE FALSE 17664.2091 38264.54831 25073.98299 43358.30176 50604.79336 45177.22215 47008.7668 35343.52792 47590.07922 26270.86931 0.672387689 1.456539099 0.954440551 1.6504327 1.926270226 1.71966986 1.789387562 1.345350529 1.811515205 1 14.68117632 -4.55696867 0.847549779 1.628483833 1.10E-09 0.3984311 0.314703383 3.231054103 1.390739163 0.110909566 5.376927826 2.77E-05 4.55696867 -1.628483832 AEQPSPPNS(ph)DSGQDAHPDPDANPDAAR ddPTM_A459_MK2206_30min_R2 1 AEQPSPPNSDSGQDAHPDPDANPDAAR 27 0 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 AEQPS(0.395)PPNS(0.599)DS(0.006)GQDAHPDPDANPDAAR 105.74 6.86E-06 0 8994.9 13036 9950 13712 10624 12349 12782 5736.3 8421.1 11073 TRUE FALSE 9683.55646 12388.6512 10281.72803 12591.68574 10206.84838 12818.94985 11103.70805 6486.054106 9153.552056 10711.68892 0.904017708 1.156554423 0.959860589 1.175508908 0.952870127 1.196725367 1.036597322 0.605511806 0.854538638 1 13.38689835 -7.635205981 8.852973146 0.798378547 1.062981085 0.404285571 0.129769368 0.216770682 16.00108679 0.056494569 0.032511087 2.32E-08 7.635205981 0.264602537 AES(ph)GPDLR ddPTM_A459_MK2206_30min_R1 1 AESGPDLR 8 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 AES(1)GPDLR 99.013 0.018995 17031000 5983.7 5384.6 5721.3 4776.7 6654.2 5497.1 6906.4 6037.8 5621.8 4891.6 TRUE FALSE 5474.754893 5034.061561 5332.954096 5144.602262 6389.149123 5808.341051 6445.686657 5985.012151 6206.206228 5497.608338 0.995843021 0.915682102 0.970049841 0.935789155 1.162168843 1.056521435 1.172452867 1.088657428 1.128892028 1 12.42458841 -6.252697015 24.99926585 1.107185477 0.952701728 0.665749113 0.050962397 345.9084255 989143.3015 0.013897942 0.017669439 5.59E-07 6.252697015 -0.15448375 AES(ph)GPDLR ddPTM_A459_MK2206_30min_R2 2 AESGPDLR 8 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 AES(1)GPDLR;AES(1)GPDLR 92.239 0.025743 95964000 758650 835210 746990 892450 703700 848810 915070 713780 651540 830480 TRUE FALSE 816732.8273 793734.6859 771894.2738 819533.9802 676069.2022 881112.0593 794920.2098 807073.4968 708209.7715 803381.5056 1.016618906 0.987992231 0.960806626 1.020105609 0.841529457 1.096754223 0.989467898 1.004595564 0.881536065 1 19.61572572 -4.82877114 3.355333167 0.976191357 1.019900364 0.034488314 0.067347488 1.23096278 22.69726831 0.016477939 0.130070911 1.48E-05 4.82877114 0.043709006 AES(ph)KESVGSR ddPTM_A459_MK2206_30min_R1 1 AESKESVGSR 10 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 AES(1)KESVGSR 120.6 0.023911 3897700 2480.6 1589.5 1566.6 1511.2 1084.2 1096.5 1716.6 2334.6 361.55 1331.9 TRUE FALSE 2269.611944 1486.023261 1460.263557 1627.592886 1041.014018 1158.582882 1602.088746 2314.188838 399.1344163 1496.905827 1.516202224 0.992729959 0.975521325 1.087304796 0.695443894 0.773985151 1.070266891 1.545981582 0.26663963 1 10.54776775 -4.755252418 4.144859359 0.945376271 1.578804604 0.243014393 0.308695902 0.366047476 12.17236658 0.074835523 0.717676903 1.76E-05 4.755252418 0.633428333 AES(ph)LDDQMLSR ddPTM_A459_MK2206_30min_R1 1 AESLDDQMLSR 11 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 AES(1)LDDQMLSR 168.89 0.00045325 14581000 2440.2 2305 1870 2370.6 2778.2 2952.5 1901.9 2052.3 2110.1 1758.6 TRUE FALSE 2232.648176 2154.944081 1743.06961 2553.184023 2667.538411 3119.667998 1775.027721 2034.356957 2329.452446 1976.468645 1.129614771 1.090300161 0.881911087 1.291790806 1.349648737 1.578405004 0.898080385 1.029288758 1.17859317 1 10.94870935 AES(ph)LDDQMLSR ddPTM_A459_MK2206_30min_R2 2 AESLDDQMLSR 11 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 AES(1)LDDQMLSR;AES(1)LDDQMLSR 187.63 1.93E-05 31348000 44983 87254 63889 69275 62346 60412 68492 56931 57780 42023 TRUE FALSE 48426.93307 82921.09324 66019.02737 63615.0109 59897.98278 62711.02099 59498.91813 64372.07717 62805.59996 40651.79295 1.191261924 2.039789323 1.624012684 1.564875896 1.473440122 1.542638502 1.463623467 1.583499091 1.544965065 1 15.31103136 -12.29282494 0.283260771 2.28E-11 1.617524145 0.416219388 0.197629302 52.47851624 1.555030563 32.08403958 0.220767822 5.10E-13 12.29282494 1.617524145 AES(ph)LPLSSNLQSK ddPTM_A459_MK2206_30min_R1 2 AESLPLSSNLQSK 13 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 AES(0.99)LPLS(0.005)S(0.005)NLQSK;AES(0.926)LPLS(0.039)S(0.034)NLQSK 165.86 0.00034704 17171600 4006.8 4326.6 4415.5 4273.9 5456.7 5066.9 6417.3 7882.1 6610.1 6066.4 TRUE FALSE 3666.000619 4044.937554 4115.788162 4603.076519 5239.348084 5353.783499 5989.213626 7813.187631 7297.243549 6817.951431 0.53769826 0.593277555 0.603669329 0.675140702 0.768463686 0.785248114 0.878447681 1.145972908 1.070298553 1 12.73512261 -6.999842563 0.80184136 1.093124788 0.575802357 0.911316116 0.059964632 0.175250999 0.235095364 0.0461951 0.034950907 1.00E-07 6.999842563 -0.517322431 AES(ph)LPLSSNLQSK ddPTM_A459_MK2206_30min_R2 2 AESLPLSSNLQSK 13 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 AES(0.908)LPLS(0.047)S(0.045)NLQSK;AES(0.98)LPLS(0.016)S(0.004)NLQSK 132.65 0.0014022 21719100 72861 91489 83982 83814 103780 105108 158297 135730 151207 162547 TRUE FALSE 78439.29418 86945.7893 86781.91796 76966.12809 99705.07575 109107.9586 137512.4138 153470.377 164358.7115 157243.1047 0.498840915 0.552938645 0.551896493 0.489472198 0.63408234 0.693880719 0.874521105 0.976007039 1.045252266 1 17.26263723 -7.214132513 1.130084012 1.031241781 0.525632892 0.980561267 0.029196551 0.060267836 0.151231455 0.019310715 0.01143808 6.11E-08 7.214132513 -0.505608889 AES(ph)MLQQADK ddPTM_A459_MK2206_30min_R2 2 AESMLQQADK 10 0 A0A0A0MSQ0;P13797-3;P13797-2;P13797;H7C4N2 A0A0A0MSQ0 PLS3 Plastin-3 1 AES(1)MLQQADK;AES(1)MLQQADK 113.69 0.0074717 13195000 39064 44395 38830 42260 42469 34282 47078 37457 38981 43119 TRUE FALSE 42054.76988 42190.40886 40124.57282 38807.22282 40801.45367 35586.62553 40896.60205 42352.75851 42371.49692 41712.03056 1.008216798 1.011468593 0.961942449 0.930360433 0.978169922 0.85315016 0.980450999 1.015360747 1.01580998 1 15.34817592 -7.526186753 20.36853959 1.00893267 0.956061183 0.242192762 0.042110797 15.70671686 96674.32467 0.020962032 0.012244297 2.98E-08 7.526186753 -0.052871487 AES(ph)PAEKVPEESVLPLVQK ddPTM_A459_MK2206_30min_R1 4 AESPAEKVPEESVLPLVQK 19 1 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 AES(1)PAEKVPEESVLPLVQK;AES(1)PAEKVPEESVLPLVQK;AES(0.999)PAEKVPEES(0.001)VLPLVQK;AES(0.997)PAEKVPEES(0.003)VLPLVQK 144.3 3.48E-05 191612400 11122.8 12275.2 11834.6 8678.6 8245.84 8033.53 10493.82 9192.67 13520.8 15644 TRUE FALSE 10176.74745 11476.08225 11031.30033 9347.027276 7917.390732 8488.381526 9793.796415 9112.299455 14926.33554 17582.09683 0.578813071 0.652714085 0.627416652 0.531621875 0.450309813 0.482785507 0.557032333 0.518271486 0.848950822 1 14.10181951 -8.412377159 3.247091512 0.996002978 0.549568666 0.87009848 0.059130322 0.086175495 1.676009535 0.065599332 0.017527575 3.87E-09 8.412377159 -0.446434312 AES(ph)PAEKVPEESVLPLVQK ddPTM_A459_MK2206_30min_R2 6 AESPAEKVPEESVLPLVQK 19 1 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 AES(0.998)PAEKVPEES(0.002)VLPLVQK;AES(0.998)PAEKVPEES(0.002)VLPLVQK;AES(1)PAEKVPEESVLPLVQK;AES(1)PAEKVPEESVLPLVQK;AES(0.994)PAEKVPEES(0.006)VLPLVQK;AES(1)PAEKVPEESVLPLVQK 93.062 0.0011621 74327900 331097 274564 285920 269391 246367.9 174919 298602 223191.5 179101.1 350201 TRUE FALSE 356446.0409 260929.551 295452.4301 247380.8936 236694.2583 181575.6651 259395.1987 252363.3954 194678.9899 338773.9701 1.052164784 0.770217237 0.872122584 0.73022403 0.698678999 0.535978798 0.765688104 0.744931481 0.574657462 1 18.3699635 -1.522878761 0.75622252 0.707382472 61.80739222 0.352434057 0.125439275 399.7634219 1.682571049 0.044502888 41641.62218 0.029999999 1.522878761 61.10000974 AES(ph)PDLR ddPTM_A459_MK2206_30min_R1 2 AESPDLR 7 0 Q6UN15;Q6UN15-5;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AES(1)PDLR;AES(1)PDLR 120.31 0.011458 95136000 15932.2 15857.2 16315 14918.7 16550.2 14315.3 16390.2 15055.8 12848.1 12857.7 TRUE FALSE 14577.08273 14824.8934 15207.58326 16067.74086 15890.97049 15125.81991 15296.83966 14924.16873 14183.70597 14450.60895 1.008752142 1.025900947 1.052383558 1.111907527 1.099674799 1.046725434 1.058560212 1.032770922 0.981529984 1 13.81884267 -8.045346477 2.837120579 0.99090767 1.059563288 0.449917126 0.029188412 0.281792859 4.274758614 0.025958806 0.00889227 9.01E-09 8.045346477 0.068655617 AES(ph)PDLR ddPTM_A459_MK2206_30min_R2 2 AESPDLR 7 0 Q6UN15;Q6UN15-5;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AES(1)PDLR;AES(1)PDLR 120.31 0.0095171 429560000 497530 606740 588500 696830 595210 583900 626160 544120 523130 580750 TRUE FALSE 535621.2793 576610.1739 608120.2963 639896.76 571839.0647 606120.7237 543944.4398 615238.3522 568630.9018 561800.1751 0.953401767 1.026361684 1.08244946 1.139011322 1.017869147 1.078890236 0.968216928 1.095119545 1.012158641 1 19.09969755 -9.949416182 15.25184118 1.00000088 1.044951603 0.04537746 0.055087185 0 0 0.053209782 0.012905268 1.12E-10 9.949416182 0.044950723 AES(ph)PEEVACR ddPTM_A459_MK2206_30min_R1 2 AESPEEVACR 10 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AES(1)PEEVACR;AES(1)PEEVACR 183.85 0.0001691 78118000 5239.7 5053.6 6025.9 5304.2 5434.4 5241 4940.3 4697.7 4560.7 4028.5 TRUE FALSE 4794.036 4724.609721 5616.878697 5712.730403 5217.93634 5537.740891 4610.741601 4656.628504 5034.801086 4527.580994 1.058851516 1.043517439 1.240591544 1.261762166 1.152477746 1.223112496 1.018367558 1.028502529 1.112028938 1 12.14452473 -7.271313295 24.86387786 1.042099961 1.165422165 0.413183259 0.072149997 740.5626242 1864830.627 0.032751479 0.022385067 5.35E-08 7.271313295 0.123322204 AES(ph)PEEVACR ddPTM_A459_MK2206_30min_R2 2 AESPEEVACR 10 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AES(1)PEEVACR;AES(1)PEEVACR 160.72 0.00043736 229560000 252450 284790 298080 296180 292860 348580 323760 210035 297860 249900 TRUE FALSE 271777.7661 270647.7427 308017.8384 271981.1466 281360.8449 361845.4562 281249.9231 237487.2957 323767.3244 241745.7835 1.124229603 1.119555174 1.274139445 1.125070902 1.163870744 1.49680152 1.163411908 0.982384438 1.339288404 1 17.8831312 -11.18946208 2.701845672 0.975312068 1.196808545 0.16416413 0.134475416 26131583.42 23443145.72 4463499.691 0.034360722 6.46E-12 11.18946208 0.221496477 AES(ph)PESSAIESTQS(ph)TPQK ddPTM_A459_MK2206_30min_R2 1 AESPESSAIESTQSTPQK 18 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 2 AES(0.751)PES(0.196)S(0.052)AIES(0.001)T(0.001)QS(0.934)T(0.065)PQK 216.16 6.82E-13 16873000 47561 54738 45654 52492 42102 46657 74040 55380 54505 63747 TRUE FALSE 51202.30673 52019.79052 47176.08157 48203.23569 40448.86393 48432.56483 64318.45906 62618.35615 59245.74638 61666.94061 0.830303988 0.843560423 0.765014141 0.78167062 0.655924609 0.785389454 1.042997405 1.015428292 0.960737565 1 15.91220965 -7.253713021 23.68031978 1.006076511 0.774170862 0.828584082 0.050751471 119.337314 365754.7314 0.02139956 0.016235868 5.58E-08 7.253713021 -0.231905649 AES(ph)PESSAIESTQST(ph)PQK ddPTM_A459_MK2206_30min_R2 1 AESPESSAIESTQSTPQK 18 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 2 AES(0.867)PES(0.048)S(0.076)AIES(0.009)T(0.001)QS(0.387)T(0.612)PQK 221.9 2.68E-12 21423000 89647 108550 95025 102540 94010 86109 140100 109510 95651 127240 TRUE FALSE 96510.44325 103159.5648 98193.08607 94162.15399 90318.69504 89385.93833 121704.7017 123823.333 103970.5511 123088.1692 0.784075707 0.838094884 0.79774593 0.7649976 0.733772349 0.726194393 0.988760353 1.00597266 0.844683545 1 16.90933258 -7.265463814 24.99868579 0.960351869 0.775875151 0.75663827 0.051590176 180.8515351 1123394.03 0.021814915 0.015311703 5.43E-08 7.265463814 -0.184476719 AES(ph)PESSAIESTQSTPQK ddPTM_A459_MK2206_30min_R1 2 AESPESSAIESTQSTPQK 18 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 AES(0.997)PES(0.003)SAIESTQSTPQK;AES(0.999)PES(0.001)SAIESTQSTPQK 353.55 6.68E-184 142869000 25206 25736 25078 23416 25075 22962.1 21851.1 21839.3 21473.2 17733.8 TRUE FALSE 23062.09734 24060.58172 23375.77523 25219.50438 24076.20965 24262.19426 20393.45299 21648.3613 23705.41598 19930.79703 1.157108635 1.207206199 1.172846986 1.26535353 1.207990309 1.217321827 1.023213119 1.086176397 1.189386252 1 14.28271178 -7.247319136 24.78876859 1.081875309 1.206221801 0.582629907 0.053732462 528.8238876 928377.3094 0.020397103 0.015721865 5.66E-08 7.247319136 0.124346493 AES(ph)PESSAIESTQSTPQK ddPTM_A459_MK2206_30min_R2 4 AESPESSAIESTQSTPQK 18 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 AES(0.932)PES(0.064)S(0.004)AIESTQSTPQK;AES(0.996)PES(0.003)SAIESTQSTPQK;AES(0.963)PES(0.037)S(0.001)AIESTQSTPQK;AES(0.96)PES(0.039)SAIESTQSTPQK 333.65 1.83E-144 132121900 240179 306083 256693 338999 276125 252527 367175 288704 234348 264344 TRUE FALSE 258567.2889 290883.3633 265251.0165 311301.6973 265282.9451 262137.0919 318964.4814 326438.6041 254731.1654 255718.4769 1.011140423 1.137514062 1.037277477 1.217360986 1.037402335 1.025100318 1.24732669 1.276554624 0.996139069 1 17.96419688 -7.241193776 24.66541689 1.153051342 1.08304281 0.038869442 0.102907911 1715.811922 2090392.784 0.038567072 0.029838556 5.74E-08 7.241193776 -0.070008532 AES(ph)PGPGSR ddPTM_A459_MK2206_30min_R2 1 AESPGPGSR 9 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 AES(0.978)PGPGS(0.022)R 81.771 0.04303 18465000 47417 43177 41805 48246 58230 50416 56064 67237 68198 64568 TRUE FALSE 51047.28198 41032.89297 43198.75783 44304.14747 55943.59762 52334.61621 48702.72946 76025.10676 74129.73877 62461.15145 0.817264504 0.656934623 0.691610014 0.709307248 0.89565428 0.837874663 0.779728332 1.217158266 1.186813516 1 15.93067154 -7.754258729 24.86900198 1.151489438 0.767557703 0.790470277 0.085953469 64.58731923 223689.8412 0.043916345 0.024669827 1.76E-08 7.754258729 -0.383931735 AES(ph)PSPAPPPGLR ddPTM_A459_MK2206_30min_R1 2 AESPSPAPPPGLR 13 0 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 AES(0.921)PS(0.079)PAPPPGLR;AES(0.841)PS(0.159)PAPPPGLR 141.34 0.00083367 237360000 5831.1 6693.5 6540.5 5477.8 6935.1 6016.7 6909 5853.9 6236.7 6516.4 TRUE FALSE 5335.134325 6257.751933 6096.549083 5899.701105 6658.860282 6357.360354 6448.113216 5802.719969 6885.027283 7323.700828 0.728475186 0.854452152 0.832441033 0.805562822 0.909220685 0.868052984 0.880444651 0.792320728 0.940102203 1 12.83835714 -14.52287875 0.040548301 1.706683768 0.439467004 0.591022825 0.047229927 629.1862448 1.89764624 53.88988031 15.88538054 3.00E-15 14.52287875 -1.267216765 AES(ph)PSPAPPPGLR ddPTM_A459_MK2206_30min_R2 3 AESPSPAPPPGLR 13 0 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 AES(0.995)PS(0.005)PAPPPGLR;AES(0.992)PS(0.008)PAPPPGLR;AES(0.992)PS(0.008)PAPPPGLR 176.99 0.00010276 255607000 267992 305292 283042 318193 265756 288988 305211 237852 251316 272209 TRUE FALSE 288509.6736 290131.6432 292478.479 292195.6141 255321.0841 299985.6408 265136.4291 268940.0731 273175.0114 263326.8426 1.095633361 1.101792891 1.110705145 1.109630948 0.969597636 1.139214058 1.006872017 1.02131659 1.037399031 1 18.00649507 -6.609996488 0.424453454 1.004616749 1.12201507 0.366444687 0.044261298 1.587046774 0.573999493 0.042860881 0.0774066 2.45E-07 6.609996488 0.117398321 AESCGS(ph)FDETESEESSK ddPTM_A459_MK2206_30min_R1 2 AESCGSFDETESEESSK 17 0 A8MXB7;Q9Y343-2;Q9Y343 A8MXB7 SNX24 Sorting nexin-24 1 AESCGS(0.91)FDET(0.084)ES(0.006)EESSK;AESCGS(0.652)FDET(0.343)ES(0.002)EES(0.001)S(0.002)K 279.29 3.93E-130 7090900 2335.8 2491.6 2364.1 2306.76 2154.69 1749.61 1953.4 2099.32 1817.86 1900.32 TRUE FALSE 2137.127944 2329.396387 2203.631479 2484.427055 2068.864135 1848.671406 1823.09225 2080.965867 2006.833052 2135.745988 1.00064706 1.090671082 1.031785377 1.163259614 0.968684547 0.865585803 0.853609118 0.974350825 0.939640324 1 11.06052436 -6.487003763 8.913189546 0.920050219 1.069781506 0.590703208 0.057012834 0.260373372 61.87392639 0.01774987 0.019850645 3.26E-07 6.487003763 0.149731287 AESCGS(ph)FDETESEESSK ddPTM_A459_MK2206_30min_R2 2 AESCGSFDETESEESSK 17 0 A8MXB7;Q9Y343-2;Q9Y343 A8MXB7 SNX24 Sorting nexin-24 1 AES(0.001)CGS(0.986)FDET(0.013)ESEESSK;AES(0.007)CGS(0.986)FDET(0.006)ES(0.001)EESSK 278.89 1.29E-63 28389000 120276 130826 127782 124694 125968 106580 155385 120478 107798 133160 TRUE FALSE 129484.423 124329.3711 132042.1881 114506.1013 121021.8634 110635.9766 134982.7628 136224.8883 117174.0752 128815.0001 1.005196778 0.965177743 1.02505289 0.888919002 0.939501326 0.858874949 1.04788078 1.057523488 0.909630673 1 16.97494108 -7.303548036 24.99707524 1.008552346 0.94849164 0.179078482 0.059008435 872.8594062 518154.6521 0.025239184 0.017016352 4.97E-08 7.303548036 -0.060060706 AESEEMETSQAGSK ddPTM_A459_MK2206_30min_R1 2 AESEEMETSQAGSK 14 0 A0A087WYC1;P34932 A0A087WYC1 HSPA4 Heat shock 70 kDa protein 4 0 ; 186.81 0.011276 5840000 1099.76 1279.43 1218.84 990.36 1193.51 974.08 1322.88 1123.02 1263.67 1651.39 FALSE TRUE 1006.219637 1196.138874 1136.108537 1066.637699 1145.969969 1029.231568 1234.633089 1113.201555 1395.033019 1855.976661 0.542151019 0.644479481 0.612135142 0.574704263 0.617448481 0.554549844 0.665220159 0.599792863 0.751643622 1 10.85796285 -8.673575432 1.541966021 1.000393771 0.59963643 0.919921714 0.036253983 0.14376821 0.68973926 0.032328375 0.009390365 2.12E-09 8.673575432 -0.400757341 AESGDS(ph)LGSEDRDLLYSIDAYR ddPTM_A459_MK2206_30min_R1 2 AESGDSLGSEDRDLLYSIDAYR 22 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AES(0.038)GDS(0.874)LGS(0.088)EDRDLLYSIDAYR;AES(0.033)GDS(0.626)LGS(0.34)EDRDLLYSIDAYR 57.477 0.011669 32682300 3720.88 3356.18 3756.89 3716.35 3964.47 3606.54 4223.14 3927.61 3529.6 3557.76 TRUE FALSE 3404.399617 3137.692072 3501.882774 4002.583921 3806.556765 3810.739178 3941.422036 3893.27132 3896.514551 3998.522169 0.851414466 0.784712936 0.875794263 1.001015813 0.951990912 0.953036902 0.985719691 0.973677563 0.97448867 1 11.96525117 -5.591348303 4.08532418 0.974007057 0.81953348 0.897067701 0.022205241 0.056519658 1.861647 0.005880479 0.010899642 2.56E-06 5.591348303 -0.154473577 AESHNDCPVR ddPTM_A459_MK2206_30min_R2 1 AESHNDCPVR 10 0 F8WD51;C9J486;C9JIP2;B4DND0;Q16831;C9K0J2 F8WD51 UPP1 Uridine phosphorylase 1 0 87.568 0.047027 956330 5246.5 5256.1 4710.9 6419.4 4744.4 4350.7 5568.8 16553 4672.6 3873.3 FALSE TRUE 5648.176074 4995.089717 4867.959055 5894.914485 4558.111017 4516.268937 4837.609871 18716.53393 5079.014302 3746.914538 1.507420577 1.333120803 1.299191376 1.573271668 1.216497193 1.205330117 1.291091596 4.995185704 1.355519121 1 11.87148736 AESPES(ph)SAIESTQSTPQK ddPTM_A459_MK2206_30min_R2 1 AESPESSAIESTQSTPQK 18 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 AES(0.309)PES(0.668)S(0.023)AIESTQSTPQK 166.9 1.39E-07 108430000 131880 182350 156080 194060 161910 148330 221510 156740 148950 168500 TRUE FALSE 141976.8342 173294.7642 161283.6293 178204.6772 155552.5999 153974.8021 192425.4709 177226.4562 161905.4018 163001.8588 0.87101359 1.063145939 0.989458835 1.093267761 0.954299546 0.944619916 1.180510899 1.087266473 0.993273346 1 17.31452889 -7.22770355 24.9947086 1.072534998 0.993072225 0.203271626 0.075585282 1021.219363 756617.5201 0.028639764 0.02218285 5.92E-08 7.22770355 -0.079462773 AESPESSAIESTQST(ph)PQK ddPTM_A459_MK2206_30min_R2 2 AESPESSAIESTQSTPQK 18 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 AESPESSAIESTQS(0.078)T(0.922)PQK;AESPESSAIESTQS(0.372)T(0.628)PQK 270.79 1.14E-53 3266700 33888 35677 31410 33702 31844 27719 41853 32961 26835 36027 TRUE FALSE 36482.49134 33905.33206 32457.19372 30948.43879 30593.64456 28773.86597 36357.65083 37269.11587 29169.05979 34851.44194 1.046800055 0.972853064 0.931301315 0.888010282 0.877830094 0.825614791 1.043217979 1.069370844 0.836954174 1 15.08893073 -9.708592301 12.20667343 1.000000385 0.943648711 0.039297705 0.083731178 0 0 0.084818445 0.020571495 1.96E-10 9.708592301 -0.056351675 AESPS(ph)PAPPPGLR ddPTM_A459_MK2206_30min_R2 1 AESPSPAPPPGLR 13 0 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 AES(0.398)PS(0.602)PAPPPGLR 114.87 0.0041147 34297000 52923 65466 64811 80198 64943 75281 71578 66614 67421 58054 TRUE FALSE 56974.82557 62215.05364 66971.76639 73645.56686 62393.01151 78145.87121 62179.72262 75320.67852 73285.15671 56159.70273 1.014514372 1.107823771 1.19252352 1.311359628 1.110992553 1.391493676 1.107194654 1.341187272 1.304942034 1 15.77724768 -5.077794091 1.917297634 1.236364838 1.004899949 0.244742794 0.115984951 0.576710427 3.364971381 0.029991994 0.192461622 8.36E-06 5.077794091 -0.231464888 AESPS(ph)PPR ddPTM_A459_MK2206_30min_R1 2 AESPSPPR 8 0 P50219 P50219 MNX1 Motor neuron and pancreas homeobox protein 1 1 AESPS(1)PPR;AESPS(1)PPR 109.83 0.012283 9210200 6213.9 6268.2 5942.3 5589.6 7268.1 6012.9 7024.3 5064.5 3470.1 4504.4 TRUE FALSE 5685.375175 5860.139041 5538.953232 6020.111961 6978.596187 6353.345202 6555.721764 5020.22161 3830.829313 5062.439078 1.123050586 1.157572259 1.094127385 1.189172228 1.378504724 1.254996871 1.294972969 0.991660647 0.756716131 1 12.30561693 -7.929331906 4.772432133 0.875650903 1.212424399 0.676698286 0.096027049 0.11839254 5.066033551 0.059910348 0.027125273 1.18E-08 7.929331906 0.336773496 AESPS(ph)PPR ddPTM_A459_MK2206_30min_R2 1 AESPSPPR 8 0 P50219 P50219 MNX1 Motor neuron and pancreas homeobox protein 1 1 AESPS(1)PPR 128.86 0.0042224 9084500 48064 43562 39732 52063 50515 57803 46458 37275 43805 47386 TRUE FALSE 51743.81679 41398.77443 41056.64505 47809.28636 48531.52728 60002.73367 40358.00879 42146.97048 47615.07972 45839.7987 1.128796772 0.903118591 0.895655003 1.042964579 1.05872034 1.308965907 0.88041418 0.919440566 1.038727941 1 15.48431309 -4.104807321 6.844578893 1.008123965 88.8986936 0.086967786 0.119643659 14706.75866 588.1754867 0.031113537 20294374.41 7.86E-05 4.104807321 87.89056963 AESSAGDGPVPYS(ph)QGSSSLIMPRPNSVAATSSTK ddPTM_A459_MK2206_30min_R2 1 AESSAGDGPVPYSQGSSSLIMPRPNSVAATSSTK 34 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 AESSAGDGPVPY(0.194)S(0.215)QGS(0.158)S(0.158)S(0.194)LIMPRPNS(0.051)VAAT(0.02)S(0.006)S(0.002)T(0.002)K 67.353 6.21E-05 4551900 20832 31036 26536 29449 34206 27990 33286 22511 25144 28622 TRUE FALSE 22426.91394 29494.79737 27420.697 27042.9225 32862.90057 29055.17906 28915.50822 25453.26499 27330.97967 27688.06648 0.809984834 1.065253054 0.990343512 0.976699565 1.186897633 1.049375516 1.044331074 0.919286473 0.987103223 1 14.75697669 -4.754979628 24.87965619 1.025775127 0.809984449 0.475620879 0.067515776 194.7259309 749910.1463 0.017820234 0.164519947 1.76E-05 4.754979628 -0.215790677 AESSAGDGPVPYSQGSSSLIMPRPNS(ph)VAATSSTK ddPTM_A459_MK2206_30min_R2 1 AESSAGDGPVPYSQGSSSLIMPRPNSVAATSSTK 34 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 AESSAGDGPVPY(0.005)S(0.005)QGS(0.004)S(0.003)S(0.003)LIMPRPNS(0.779)VAAT(0.158)S(0.018)S(0.018)T(0.007)K 84.221 2.94E-08 6697000 17703 27910 22471 27745 29159 25395 22393 15704 21413 22336 TRUE FALSE 19058.35529 26524.02998 23220.17192 25478.14475 28014.07115 26361.42452 19452.7722 17756.56672 23275.46403 21607.17815 0.882038143 1.227556407 1.07465083 1.179151881 1.296516878 1.220030878 0.900292119 0.821790175 1.077209799 1 14.39922305 -7.266203386 24.9748278 0.934972195 1.155350504 0.379931695 0.122301602 396.477856 2078483.697 0.050057671 0.034986064 5.42E-08 7.266203386 0.220378309 AESSSGGGTVPSSAGILEQGPS(ph)PGDGSPPKPK ddPTM_A459_MK2206_30min_R1 1 AESSSGGGTVPSSAGILEQGPSPGDGSPPKPK 32 1 Q68EM7-5;Q68EM7-3;Q68EM7-6;Q68EM7;Q68EM7-7 Q68EM7-5 ARHGAP17 Rho GTPase-activating protein 17 1 AESSSGGGTVPSSAGILEQGPS(0.55)PGDGS(0.45)PPKPK 134.14 4.55E-19 21644000 2219.6 2904.6 3638.4 2251.6 1524.1 1706.7 1722.9 2087.9 3209.7 2942.6 TRUE FALSE 2030.811364 2715.510012 3391.435545 2425.018622 1463.39187 1803.331879 1607.968485 2069.64571 3543.359801 3307.151503 0.614066626 0.821102393 1.025485389 0.733265053 0.442493145 0.545282512 0.486209502 0.625809162 1.071423489 1 11.69137342 -10.44710085 8.290008327 1 0.699266441 0.15781218 0.202141384 1.50E-09 1.90E-10 0.210894297 0.05114938 3.57E-11 10.44710085 -0.30073356 AESSSGGGTVPSSAGILEQGPSPGDGS(ph)PPKPK ddPTM_A459_MK2206_30min_R1 3 AESSSGGGTVPSSAGILEQGPSPGDGSPPKPK 32 1 Q68EM7-5;Q68EM7-3;Q68EM7-6;Q68EM7;Q68EM7-7 Q68EM7-5 ARHGAP17 Rho GTPase-activating protein 17 1 AESSSGGGTVPSSAGILEQGPS(0.032)PGDGS(0.968)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.035)PGDGS(0.965)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.039)PGDGS(0.961)PPKPK 152.5 3.41E-21 65197000 12154.7 13196.6 14670.5 11407.9 8945.1 8984.1 11339.6 9575.4 16113 16001.4 TRUE FALSE 11120.87894 12337.49894 13674.70733 12286.53843 8588.797725 9492.771978 10583.15597 9491.683287 17788.00401 17983.77424 0.618384038 0.686035021 0.760391404 0.683201328 0.47758594 0.527852043 0.588483587 0.527791506 0.989114063 1 14.13440821 -8.269694883 24.79783443 0.994557142 0.611090797 0.784495058 0.080883735 303.0957742 910424.5749 0.083676415 0.023091455 5.37E-09 8.269694883 -0.383466345 AESSSGGGTVPSSAGILEQGPSPGDGS(ph)PPKPK ddPTM_A459_MK2206_30min_R2 4 AESSSGGGTVPSSAGILEQGPSPGDGSPPKPK 32 1 Q68EM7-5;Q68EM7-3;Q68EM7-6;Q68EM7;Q68EM7-7 Q68EM7-5 ARHGAP17 Rho GTPase-activating protein 17 1 AESSSGGGTVPSSAGILEQGPS(0.124)PGDGS(0.876)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.081)PGDGS(0.919)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.162)PGDGS(0.838)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.036)PGDGS(0.964)PPKPK 96.133 6.13E-09 216862300 339725 276689 315680 262692 263254 166004 329732 273357 187195 340943 TRUE FALSE 365734.6072 262949.0266 326204.6136 241229.2233 252917.3252 172321.3985 286437.7923 309085.6985 203476.8827 329818.0578 1.108898068 0.797254791 0.989044129 0.731400897 0.766838926 0.522474117 0.868472133 0.937140011 0.616936756 1 18.33131086 -1.522902172 0.871476032 0.778575925 128.6926899 0.271706002 0.147700542 1006.020201 2.543409884 0.049457112 255487.5791 0.029998382 1.522902172 127.9141139 AESSSGGGTVPSSAGILEQGPSPGDGS(ph)PPKPKDPVSAAVPAPGR ddPTM_A459_MK2206_30min_R1 1 AESSSGGGTVPSSAGILEQGPSPGDGSPPKPKDPVSAAVPAPGR 44 2 Q68EM7-5;Q68EM7-3;Q68EM7-6;Q68EM7;Q68EM7-7 Q68EM7-5 ARHGAP17 Rho GTPase-activating protein 17 1 AESSSGGGTVPSSAGILEQGPS(0.242)PGDGS(0.747)PPKPKDPVS(0.01)AAVPAPGR 79.866 2.55E-10 35627000 5738.3 4354.3 4831.4 5719.3 4601.3 4238.2 4151.7 5574.6 3494.9 2625.3 TRUE FALSE 5250.227452 4070.834279 4503.458029 6159.801477 4418.020478 4478.163221 3874.747668 5525.86186 3858.207362 2950.541984 1.7794112 1.379690342 1.526315522 2.087684741 1.49735896 1.517742586 1.313232514 1.872829429 1.307626661 1 11.52676427 -6.496797553 24.95455059 1.457525294 1.675647176 0.193661492 0.268170723 1543.367045 1476698.921 0.082234862 0.092920133 3.19E-07 6.496797553 0.218121882 AESSSGGGTVPSSAGILEQGPSPGDGS(ph)PPKPKDPVSAAVPAPGR ddPTM_A459_MK2206_30min_R2 1 AESSSGGGTVPSSAGILEQGPSPGDGSPPKPKDPVSAAVPAPGR 44 2 Q68EM7-5;Q68EM7-3;Q68EM7-6;Q68EM7;Q68EM7-7 Q68EM7-5 ARHGAP17 Rho GTPase-activating protein 17 1 AESSSGGGTVPSSAGILEQGPS(0.269)PGDGS(0.723)PPKPKDPVS(0.007)AAVPAPGR 58.376 6.77E-06 20922000 55713 133140 108840 101590 129810 91895 127540 80638 131960 104020 TRUE FALSE 59978.43012 126528.4612 112468.6713 93289.77203 124713.0072 95392.12862 110793.8448 91177.66347 143437.6423 100625.8359 0.596053981 1.257415256 1.117691796 0.927095623 1.239373626 0.947988434 1.101047696 0.906105899 1.425455411 1 16.61864124 -4.749572276 24.95828749 1.093932004 0.59605284 0.477699518 0.158631281 453.571982 953869.3403 0.036760503 0.590951239 1.78E-05 4.749572276 -0.497879163 AET(ph)EEAEEPEEDGEEHVCVSASK ddPTM_A459_MK2206_30min_R1 2 AETEEAEEPEEDGEEHVCVSASK 23 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AET(1)EEAEEPEEDGEEHVCVSASK;AET(1)EEAEEPEEDGEEHVCVSASK 160.52 1.46E-09 17870600 7932.4 8062.6 7701.1 6006.2 6468 6502.3 9460.5 7558.9 10632.8 14663.2 TRUE FALSE 7257.707725 7537.723275 7178.370788 6468.798565 6210.365864 6870.454607 8829.407307 7492.813334 11738.11761 16479.78792 0.440400554 0.457392007 0.435586357 0.392529236 0.376847439 0.416901883 0.535771901 0.454666854 0.712273584 1 14.00841006 -8.572639837 1.263065189 1.002230077 0.425971754 0.950791089 0.04069785 0.104913817 0.363769939 0.039963178 0.012262421 2.68E-09 8.572639837 -0.576258323 down AET(ph)EEAEEPEEDGEEHVCVSASK ddPTM_A459_MK2206_30min_R2 5 AETEEAEEPEEDGEEHVCVSASK 23 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AET(1)EEAEEPEEDGEEHVCVSASK;AET(1)EEAEEPEEDGEEHVCVSASK;AET(1)EEAEEPEEDGEEHVCVSASK;AET(1)EEAEEPEEDGEEHVCVSASK;AET(1)EEAEEPEEDGEEHVCVSASK 155.47 3.01E-09 110104200 538299 336005 416762 367375 338810 289156 423734 313205 275412 483826 TRUE FALSE 579511.5853 319319.4803 430656.6371 337359.2873 325506.617 300160.0342 368097.2168 354141.9689 299366.8379 468038.7972 1.238169974 0.682250023 0.920130211 0.720793424 0.695469305 0.641314429 0.786467316 0.756650882 0.639619706 1 18.8362686 -4.756459354 24.9999594 0.75152847 1.238170721 0.621077005 0.1117896 96.37022141 483727.8562 0.026335824 0.213002563 1.75E-05 4.756459354 0.486642251 AET(ph)PPLPIPPPPPDIQPLER ddPTM_A459_MK2206_30min_R1 2 AETPPLPIPPPPPDIQPLER 20 0 U3KPW8;A0A669KB72;Q8IX15;Q8IX15-3 U3KPW8 HOMEZ Homeobox and leucine zipper protein Homez 1 AET(1)PPLPIPPPPPDIQPLER;AET(1)PPLPIPPPPPDIQPLER 156 4.06E-06 8852200 1951.29 2199.48 2432.72 1864.76 2198.42 2213.73 1965 1639 2003.49 1917.43 TRUE FALSE 1785.322539 2056.293452 2267.593744 2008.384138 2110.852276 2339.06948 1833.918435 1624.670396 2211.759955 2154.975704 0.828465275 0.954207255 1.05225954 0.931975305 0.979524861 1.085427309 0.851015829 0.753915876 1.026350297 1 11.07345589 AET(ph)PPLPIPPPPPDIQPLER ddPTM_A459_MK2206_30min_R2 6 AETPPLPIPPPPPDIQPLER 20 0 U3KPW8;A0A669KB72;Q8IX15;Q8IX15-3 U3KPW8 HOMEZ Homeobox and leucine zipper protein Homez 1 AET(1)PPLPIPPPPPDIQPLER;AET(1)PPLPIPPPPPDIQPLER;AET(1)PPLPIPPPPPDIQPLER;AET(1)PPLPIPPPPPDIQPLER;AET(1)PPLPIPPPPPDIQPLER;AET(1)PPLPIPPPPPDIQPLER 138.77 0.00017339 10458300 21907.08 30316.4 26088.6 29448.9 25660.8 26910 29043.9 23421.23 23358.9 27304 TRUE FALSE 23584.30289 28810.93166 26958.3809 27042.83067 24653.22806 27934.07891 25230.40104 26482.46518 25390.6149 26413.07272 0.89290266 1.090783036 1.02064539 1.023842661 0.93337221 1.057585356 0.955224003 1.002627201 0.961289706 1 14.68896452 AET(ph)PTESVS(ph)EPEVATK ddPTM_A459_MK2206_30min_R2 1 AETPTESVSEPEVATK 16 0 P18858-3;P18858;M0R0Q7;P18858-2;B4E135 P18858-3 LIG1 DNA ligase 1;DNA ligase 2 AET(0.998)PT(0.002)ES(0.008)VS(0.987)EPEVAT(0.005)K 193.32 2.07E-19 0 29157 29603 27890 26731 32999 24656 33291 24812 25212 29989 TRUE FALSE 31389.28234 28132.95807 28819.83868 24546.99179 31703.29345 25594.30136 28919.85171 28055.01359 27404.89419 29010.46139 1.081998729 0.969752176 0.993429174 0.846142757 1.092822794 0.882243857 0.996876655 0.967065405 0.944655579 1 14.82428562 -4.75116342 4.423688276 0.963680871 1.093712421 0.228928634 0.063885444 0.327910751 13.48504294 0.014749213 0.138526501 1.77E-05 4.75116342 0.13003155 AETFAGYDCTNS(ph)PTK ddPTM_A459_MK2206_30min_R1 2 AETFAGYDCTNSPTK 15 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 AETFAGYDCT(0.003)NS(0.957)PT(0.04)K;AET(0.047)FAGY(0.003)DCT(0.343)NS(0.597)PT(0.011)K 201.57 1.54E-05 12149100 3823.4 3992.4 3974.7 3060 2906.5 2440.17 3543.6 3188.6 4255.6 4803.8 TRUE FALSE 3498.199753 3732.494034 3704.908438 3295.68173 2790.72795 2578.330317 3307.21291 3160.722406 4697.984849 5398.931011 0.647943036 0.691339457 0.686230002 0.610432273 0.516903799 0.477563116 0.6125681 0.585434857 0.870169454 1 12.39845807 -8.401703786 3.118208163 0.996476885 0.601900881 0.814838056 0.064494202 0.109308527 1.970399588 0.071502933 0.019206823 3.97E-09 8.401703786 -0.394576004 AETFAGYDCTNS(ph)PTK ddPTM_A459_MK2206_30min_R2 2 AETFAGYDCTNSPTK 15 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 AETFAGYDCT(0.015)NS(0.88)PT(0.105)K;AET(0.002)FAGYDCTNS(0.92)PT(0.078)K 223.14 1.08E-09 18184800 60042 55219 58550 49557 52996 44687 60982 42633 42759 55074 TRUE FALSE 64638.86168 52476.90476 60502.02778 45508.03458 50915.11076 46387.5951 52974.99015 48205.27948 46478.10053 53276.93989 1.213261531 0.984983463 1.135613793 0.854178837 0.955668829 0.870688054 0.99433245 0.904805711 0.872386827 1 15.7012236 -5.755760357 24.9996621 0.920069878 1.098656013 0.600463442 0.070625555 92.59138549 407591.5087 0.018060287 0.030209342 1.75E-06 5.755760357 0.178586135 AETPT(ph)ESVSEPEVATK ddPTM_A459_MK2206_30min_R2 1 AETPTESVSEPEVATK 16 0 P18858-3;P18858;M0R0Q7;P18858-2;B4E135 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 AET(0.414)PT(0.585)ESVSEPEVATK 168.64 1.72E-05 5163300 66824 75518 79985 76995 77702 60767 80451 61835 60374 76161 TRUE FALSE 71940.09682 71767.88593 82651.65998 70704.26221 74651.02906 63079.53077 69887.68706 69917.04681 65625.22139 73675.87281 0.976440374 0.974102962 1.12182804 0.959666435 1.013235761 0.856176227 0.94858309 0.948981589 0.890728795 1 16.16890463 -6.721830824 24.99359689 0.926935838 1.010634435 0.347661489 0.054848129 172.463801 108826.7656 0.017765812 0.017765565 1.90E-07 6.721830824 0.083698597 AETPTESVS(ph)EPEVATK ddPTM_A459_MK2206_30min_R1 4 AETPTESVSEPEVATK 16 0 P18858-3;P18858;M0R0Q7;P18858-2;B4E135 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 AETPTESVS(1)EPEVATK;AETPTES(0.006)VS(0.994)EPEVATK;AETPTES(0.048)VS(0.952)EPEVATK;AETPTES(0.002)VS(0.997)EPEVAT(0.001)K 308.04 7.52E-102 161144000 16297.1 17174 15796.4 13366.4 13655.1 13555.1 16185.4 14250.9 14946.7 14096.6 TRUE FALSE 14910.94607 16055.96948 14724.18438 14395.88244 13111.18845 14322.57805 15105.7015 14126.30588 16500.46295 15842.99323 0.941169755 1.01344293 0.929381473 0.908659256 0.827570161 0.904032328 0.953462599 0.891643749 1.041499085 1 13.95155731 -10.29169493 6.147902745 1.000000002 0.931199309 0.101971578 0.057513619 1.50E-09 2.80E-10 0.05766774 0.013986481 5.11E-11 10.29169493 -0.068800693 AETPTESVS(ph)EPEVATK ddPTM_A459_MK2206_30min_R2 3 AETPTESVSEPEVATK 16 0 P18858-3;P18858;M0R0Q7;P18858-2;B4E135 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 AETPTES(0.013)VS(0.987)EPEVATK;AETPTES(0.002)VS(0.997)EPEVAT(0.001)K;AET(0.008)PT(0.028)ES(0.328)VS(0.636)EPEVATK 239.19 1.02E-64 114117000 133215 147384 131032 141989 137255 119969 157964 114626 127729 146632 TRUE FALSE 143414.0428 140065.1249 135400.5415 130388.0445 131865.679 124534.5044 137223.1371 129608.0118 138838.6375 141847.4098 1.011044495 0.987435196 0.95455068 0.919213433 0.929630504 0.877946975 0.967399667 0.913714335 0.978788669 1 17.11398028 -5.2266788 2.203824597 0.935406179 1.008705894 0.317193877 0.033558482 0.358860264 3.184630222 0.008893436 0.034932772 5.93E-06 5.2266788 0.073299715 AETSEGSGSAPAVPEASAS(ph)PK ddPTM_A459_MK2206_30min_R1 2 AETSEGSGSAPAVPEASASPK 21 0 I6LM39;A0A087X1U4;P51608;P51608-2;A0A087WVW7;A0A0D9SFX7;B5MCB4 I6LM39 MECP2 Methyl-CpG-binding protein 2 1 AETSEGSGSAPAVPEAS(0.009)AS(0.991)PK;AETSEGSGSAPAVPEAS(0.206)AS(0.794)PK 366.3 1.39E-218 21544800 5175.2 7722.9 8448.4 5233 3514.3 3464.2 5335 5698.8 7932.6 7613.5 TRUE FALSE 4735.022064 7220.137806 7874.946147 5636.046567 3374.317989 3660.34001 4979.111884 5648.975992 8757.222157 8556.717859 0.55336896 0.843797578 0.920323222 0.658669207 0.39434723 0.427773835 0.581895064 0.660180233 1.023432384 1 13.06284181 -8.242776153 5.525155473 1.015910616 0.630293721 0.497102692 0.153690822 0.156007085 16.57507275 0.137799891 0.045477413 5.72E-09 8.242776153 -0.385616896 AETSEGSGSAPAVPEASAS(ph)PK ddPTM_A459_MK2206_30min_R2 2 AETSEGSGSAPAVPEASASPK 21 0 I6LM39;A0A087X1U4;P51608;P51608-2;A0A087WVW7;A0A0D9SFX7;B5MCB4 I6LM39 MECP2 Methyl-CpG-binding protein 2 1 AETSEGSGSAPAVPEAS(0.008)AS(0.992)PK;AETSEGSGSAPAVPEAS(0.002)AS(0.998)PK 183.21 1.22E-14 29302000 134310 137447 145993 93711 91342 81247 127121 96157 86883 144489 TRUE FALSE 144592.8769 130621.5818 150860.3338 86054.51153 87755.45412 84338.91152 110429.86 108725.0501 94439.92629 139774.3358 1.034473718 0.934517636 1.079313544 0.615667469 0.627836674 0.603393399 0.790058199 0.777861325 0.67565999 1 17.09273996 -5.758594653 24.99999929 0.71127419 1.007943272 0.563551414 0.115845359 51.20446617 449984.21 0.031148887 0.05103932 1.74E-06 5.758594653 0.296669082 AEVDNRS(ph)PQK ddPTM_A459_MK2206_30min_R1 2 AEVDNRSPQK 10 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 AEVDNRS(1)PQK;AEVDNRS(1)PQK 135.1 0.0095043 8888000 4816.1 4940.8 4222 4419.5 2671.4 2905.2 4454.7 4593 799.96 3870.4 TRUE FALSE 4406.465405 4619.153022 3935.422403 4759.890656 2564.992481 3069.689913 4157.535091 4552.843885 883.1187047 4349.894372 1.013005151 1.061900043 0.904716774 1.094254308 0.589667762 0.705692978 0.955778402 1.046656193 0.203020724 1 12.08676465 -6.24845001 24.89946491 0.760528783 1.013446124 0.241277083 0.23260557 1183.438163 2268544.634 0.067633277 0.086742513 5.64E-07 6.24845001 0.252917341 AEVPGAT(ph)GGDSPHLQPAEPPGEPR ddPTM_A459_MK2206_30min_R2 1 AEVPGATGGDSPHLQPAEPPGEPR 24 0 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;A0A087WWC8;Q9P2K5-4 A0A0A0MQW0 MYEF2 Myelin expression factor 2 1 AEVPGAT(0.52)GGDS(0.48)PHLQPAEPPGEPR 58.284 0.015227 10208000 14804 30698 21728 18084 22888 17390 19874 15815 17720 22384 TRUE FALSE 15937.40562 29173.58196 22452.40068 16606.47935 21989.30212 18051.78864 17264.51993 17882.0748 19261.25357 21653.61191 0.736016037 1.347284789 1.036889401 0.76691498 1.015502735 0.833661779 0.797304394 0.825824111 0.889516892 1 14.40232007 -5.627229207 6.897874368 0.869755778 1.077911313 0.178741532 0.157254 0.282584491 16.39236571 0.040397549 0.070379785 2.36E-06 5.627229207 0.208155535 AEVPGATGGDS(ph)PHLQPAEPPGEPR ddPTM_A459_MK2206_30min_R1 4 AEVPGATGGDSPHLQPAEPPGEPR 24 0 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;A0A087WWC8;Q9P2K5-4 A0A0A0MQW0 MYEF2 Myelin expression factor 2 1 AEVPGAT(0.006)GGDS(0.994)PHLQPAEPPGEPR;AEVPGAT(0.018)GGDS(0.982)PHLQPAEPPGEPR;AEVPGATGGDS(1)PHLQPAEPPGEPR;AEVPGATGGDS(1)PHLQPAEPPGEPR 168.2 5.55E-16 394478000 13612.2 13513.8 12572.2 10099.4 13243.8 12663 15175.9 11406.3 13464.6 14096.7 TRUE FALSE 12454.41091 12634.04916 11718.83409 10877.25754 12716.2714 13379.96812 14163.5434 11306.57592 14864.29335 15843.10562 0.786109189 0.797447765 0.739680361 0.686560943 0.802637545 0.844529377 0.893987817 0.713659064 0.938218409 1 13.95156754 -8.78342208 0.396605273 1.02051678 0.754888401 0.562816693 0.062718055 1.442264349 0.516699077 0.122996291 0.051347191 1.65E-09 8.78342208 -0.265628379 AEVPGATGGDS(ph)PHLQPAEPPGEPR ddPTM_A459_MK2206_30min_R2 2 AEVPGATGGDSPHLQPAEPPGEPR 24 0 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;A0A087WWC8;Q9P2K5-4 A0A0A0MQW0 MYEF2 Myelin expression factor 2 1 AEVPGAT(0.185)GGDS(0.815)PHLQPAEPPGEPR;AEVPGAT(0.429)GGDS(0.571)PHLQPAEPPGEPR 133.91 6.40E-08 347430000 94899 97641 90885 100735 87726 100527 104085 77110 83260 92747 TRUE FALSE 102164.5404 92792.28992 93915.06054 92504.62826 84281.43645 104352.6254 90418.51447 87188.54176 90501.8043 89720.67299 1.138695654 1.034235331 1.046749399 1.03102914 0.939375883 1.1630834 1.007777934 0.971777617 1.008706258 1 16.45315282 -2.125962505 1.17196233 1.020254248 76.95892381 0.285456639 0.055497229 1398.536916 4.00000191 0.016609777 284551.518 0.007482341 2.125962505 75.93866956 AFAAVPTSHPPEDAPAQPPT(ph)PGPAASPEQLSFR ddPTM_A459_MK2206_30min_R2 1 AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR 33 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 AFAAVPTSHPPEDAPAQPPT(0.842)PGPAAS(0.148)PEQLS(0.01)FR 80.067 7.64E-06 43585000 36313 34459 27786 40272 33427 33487 43676 27832 38913 33628 TRUE FALSE 39093.1512 32747.81617 28712.37137 36981.64878 32114.48802 34761.37125 37941.28874 31469.73796 42297.5824 32530.72111 1.201730237 1.00667354 0.882623268 1.136822287 0.987204923 1.068570571 1.166321786 0.967385194 1.300235007 1 14.98951518 -7.003312172 24.5714373 1.107435968 1.036352864 0.064006824 0.116691331 308.0074863 2284979.312 0.040037864 0.034577277 9.92E-08 7.003312172 -0.071083104 AFAAVPTSHPPEDAPAQPPTPGPAAS(ph)PEQLSFR ddPTM_A459_MK2206_30min_R1 4 AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR 33 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 AFAAVPTSHPPEDAPAQPPT(0.2)PGPAAS(0.737)PEQLS(0.064)FR;AFAAVPTSHPPEDAPAQPPTPGPAAS(0.98)PEQLS(0.019)FR;AFAAVPTSHPPEDAPAQPPTPGPAAS(0.97)PEQLS(0.03)FR;AFAAVPTSHPPEDAPAQPPT(0.008)PGPAAS(0.948)PEQLS(0.044)FR 173.48 1.28E-35 118308000 8148.28 6829.67 5677.72 5950.64 8722.91 7993.33 8900.87 8029.4 8190.5 7910.07 TRUE FALSE 7455.225998 6385.057242 5292.332185 6408.959324 8375.458024 8445.905437 8307.109203 7959.199802 9041.931785 8890.02919 0.838605345 0.718226803 0.595311002 0.720915442 0.942118169 0.950042487 0.934429913 0.895295126 1.01708685 1 13.11797244 -6.258650653 5.603014374 0.950653295 0.708211745 0.772263381 0.063284981 0.080251141 9.795154755 0.019943942 0.024360441 5.51E-07 6.258650653 -0.242441549 AFAAVPTSHPPEDAPAQPPTPGPAAS(ph)PEQLSFR ddPTM_A459_MK2206_30min_R2 1 AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR 33 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 AFAAVPTSHPPEDAPAQPPT(0.07)PGPAAS(0.875)PEQLS(0.055)FR 109.62 3.64E-14 38163000 72470 70428 64188 74648 72883 84691 105270 84749 94127 71009 TRUE FALSE 78018.35892 66930.64793 66327.99588 68549.01961 70021.24721 87913.97535 91447.92255 95825.98529 102313.9963 68691.98215 1.135770966 0.974358955 0.965585703 0.997918789 1.019351095 1.279828775 1.331275058 1.395009757 1.489460533 1 16.06785409 -6.804687484 3.78835941 1.333258409 1.009452463 0.54884415 0.126010326 0.152494955 4.55442163 0.043768641 0.039715309 1.57E-07 6.804687484 -0.323805946 AFEDDDITHVEGSVDPIR ddPTM_A459_MK2206_30min_R2 2 AFEDDDITHVEGSVDPIR 18 0 J3KQ32;Q9NTK5;Q9NTK5-3 J3KQ32 OLA1 Obg-like ATPase 1 0 ; 95.873 0.0054731 6194500 31372 28415 31540 26908 27466 28469 31394 28043 24055 31483 FALSE TRUE 33773.86444 27003.95242 32591.52786 24709.53033 26387.54683 29552.40774 27271.93009 31708.31639 26147.26042 30455.71229 1.108950075 0.886662974 1.070128571 0.811326627 0.866423566 0.97034039 0.895461903 1.041128708 0.858533866 1 14.89442523 -4.752075206 24.99135462 0.932963424 1.108950422 0.300146894 0.08044742 468.9244747 1251388.409 0.019203219 0.237935197 1.77E-05 4.752075206 0.175986998 AFEEDIET(ph)PPTR ddPTM_A459_MK2206_30min_R2 1 AFEEDIETPPTR 12 0 Q9P2D1 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 AFEEDIET(0.942)PPT(0.058)R 98.902 0.034748 1835500 8011.5 9343.2 6549.7 8816.8 6900.1 7755.6 4375.8 5097.3 4135.5 7214 TRUE FALSE 8624.8666 8879.230274 6768.063729 8096.439236 6629.167404 8050.744793 3801.252204 5763.534612 4495.198315 6978.607771 1.235900753 1.27234981 0.969830079 1.160179724 0.949926923 1.153631936 0.544700652 0.825886022 0.6441397 1 12.76872353 -7.245864563 24.83303177 0.739172095 1.117170213 0.605348256 0.1460949 481.8785828 768325.0885 0.054250943 0.041868949 5.68E-08 7.245864563 0.377998118 AFFSEVER ddPTM_A459_MK2206_30min_R2 1 AFFSEVER 8 0 Q9UQ80;Q9UQ80-2;F8VR77 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 171.38 0.0022481 11113000 29607 36736 32748 35957 36360 40240 36119 31604 33384 28001 FALSE TRUE 31873.73468 34911.74366 33839.80198 33019.19808 34932.32371 41771.3614 31376.53191 35734.75131 36287.67998 27087.32966 1.176702727 1.288858817 1.249285271 1.21899052 1.289618583 1.542099643 1.158347179 1.319242308 1.339655124 1 14.72533056 -10.62223291 3.938826511 0.999925158 1.288671848 0.416769561 0.101827707 72420853.92 134103814.1 76423.54088 0.02539849 2.39E-11 10.62223291 0.28874669 AFGPGLQGGSAGS(ph)PAR ddPTM_A459_MK2206_30min_R1 5 AFGPGLQGGSAGSPAR 16 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR;AFGPGLQGGS(0.048)AGS(0.952)PAR 183.73 8.56E-07 386185900 8788.6 9462.16 9525.9 8161.33 9707.9 8465 8828.4 8925.6 7645.5 7554.99 TRUE FALSE 8041.083419 8846.171664 8879.308449 8789.917051 9321.213786 8944.280985 8239.473544 8847.56442 8440.277085 8490.959198 0.947017084 1.041834198 1.045736794 1.035208961 1.097781013 1.05338876 0.97038195 1.041998226 0.99403105 1 13.05171182 -10.07214839 10.737962 1.000001034 1.028484235 0.027019638 0.041624266 0 0 0.04089105 0.009917536 8.47E-11 10.07214839 0.028483202 AFGPGLQGGSAGS(ph)PAR ddPTM_A459_MK2206_30min_R2 6 AFGPGLQGGSAGSPAR 16 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR;AFGPGLQGGS(0.004)AGS(0.996)PAR;AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR 227.41 4.26E-15 637434000 248767 302026 240536 297842 274903 287336 283233 214394 242120 240614 TRUE FALSE 267812.7928 287027.828 248555.3502 273507.3559 264108.9269 298270.7728 246044.1669 242416.0319 263179.1599 232762.7849 1.150582525 1.233134533 1.067848326 1.175047618 1.134669905 1.281436691 1.057059731 1.041472468 1.130675422 1 17.82850089 -7.34840302 24.99985616 1.060757207 1.169950329 0.464020705 0.061202677 74.04351634 21283.91251 0.024819735 0.016733465 4.48E-08 7.34840302 0.109193121 AFHNEAQVNPER ddPTM_A459_MK2206_30min_R1 2 AFHNEAQVNPER 12 0 F5H282;E7EQR6;P17987 F5H282 TCP1 T-complex protein 1 subunit alpha 0 ; 133.98 0.00234 22721000 13703.7 12639.4 12364.7 10782.4 13280.9 12397.3 13343.2 11246.8 11651.8 11782.2 FALSE TRUE 12538.12835 11816.57276 11525.41861 11612.86232 12751.89363 13099.22441 12453.09947 11148.47041 12863.04631 13241.86789 0.946854965 0.892364496 0.870377103 0.876980681 0.962998101 0.989227843 0.94043375 0.841910711 0.971392134 1 13.69281902 -6.260714351 24.99867023 0.944472997 0.89446238 0.251112876 0.045082699 109.7559427 3784352.854 0.014301771 0.017410317 5.49E-07 6.260714351 -0.050010616 AFHNEAQVNPER ddPTM_A459_MK2206_30min_R2 2 AFHNEAQVNPER 12 0 F5H282;E7EQR6;P17987 F5H282 TCP1 T-complex protein 1 subunit alpha 0 ; 136.27 0.001996 24486700 79974 99482 85655 89374 84188 87744 101742 96468 80738 93071 FALSE TRUE 86096.87093 94541.86854 88510.69495 82071.85831 80882.35611 91083.15941 88383.15319 109076.6988 87760.4453 90034.10089 0.95626957 1.050067337 0.983079678 0.911564146 0.898352461 1.011651791 0.981663084 1.211504283 0.974746729 1 16.45818391 -7.558391346 24.99999802 1.075192141 0.969555444 0.25178645 0.071673343 215.5645579 151749.86 0.033032334 0.019071302 2.76E-08 7.558391346 -0.105636697 AFKPEETSSNSDPPS(ph)PPVLNNSHPVPR ddPTM_A459_MK2206_30min_R2 2 AFKPEETSSNSDPPSPPVLNNSHPVPR 27 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 AFKPEETSSNSDPPS(1)PPVLNNSHPVPR;AFKPEETSSNSDPPS(1)PPVLNNSHPVPR 106.88 1.10E-09 24178400 138557 164701 141925 170520 166877 129120 189824 130070 119595 156698 TRUE FALSE 149165.0305 156522.1878 146656.7087 156587.9705 160324.5705 134033.7521 164899.8808 147070.5956 129997.1569 151584.9571 0.984035839 1.032570717 0.967488539 1.033004683 1.057654886 0.884215391 1.087838028 0.970218935 0.857586131 1 17.20976707 -8.00442409 24.95931452 0.923829543 1.006193409 0.204563333 0.061470744 236.1700879 1332388.272 0.03262239 0.015051699 9.90E-09 8.00442409 0.082363866 AFLAELEQNS(ph)PK ddPTM_A459_MK2206_30min_R1 1 AFLAELEQNSPK 12 0 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 AFLAELEQNS(1)PK 195.71 0.00016911 33536000 3462.7 4632.7 4608.2 3898.4 2902.4 2664.9 3510.6 3278 3865.2 3557.1 TRUE FALSE 3168.179182 4331.110388 4295.408223 4198.655443 2786.791262 2815.784335 3276.414279 3249.340792 4267.001372 3997.780403 0.792484545 1.083378763 1.074448266 1.050246642 0.697084627 0.70433692 0.819558342 0.812786212 1.067342611 1 11.96498351 -6.240440666 24.72716911 0.832000371 1.011392991 0.225085147 0.133124942 942.5186485 1109868.427 0.040005507 0.051590351 5.75E-07 6.240440666 0.17939262 AFLAELEQNS(ph)PK ddPTM_A459_MK2206_30min_R2 3 AFLAELEQNSPK 12 0 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK 190.57 0.00013711 8312900 80977 82538 83740 63691.2 71661 57390.2 88793 55441.1 59888.3 77981 TRUE FALSE 87176.66138 78439.28294 86531.8498 58487.42522 68847.22907 59574.22428 77134.37244 62687.44213 65097.27608 75436.48636 1.155629929 1.039805626 1.147082188 0.775320114 0.912651588 0.789726923 1.022507492 0.830996314 0.862941518 1 16.20297486 -5.751137732 24.99646803 0.880763087 1.106735941 0.625181425 0.081255222 128.9135701 312799.8388 0.020852233 0.035607356 1.77E-06 5.751137732 0.225972854 AFLS(ph)PPTLLEGPLR ddPTM_A459_MK2206_30min_R1 2 AFLSPPTLLEGPLR 14 0 G3V599;Q96PC5-6;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-14;Q96PC5-7;Q96PC5-12;Q96PC5 G3V599 MIA2 Melanoma inhibitory activity protein 2 1 AFLS(0.991)PPT(0.009)LLEGPLR;AFLS(0.839)PPT(0.161)LLEGPLR 113.52 0.0032682 6288900 2744 2779 2514.56 2567.1 3966.9 2826.2 3848 3182.3 3760.7 2892.5 TRUE FALSE 2510.608391 2598.086595 2343.878673 2764.818487 3808.889973 2986.217002 3591.306941 3154.477487 4151.638223 3250.844737 0.772294155 0.799203532 0.721006035 0.850492321 1.171661608 0.918597239 1.10473038 0.970356243 1.277095204 1 11.66659894 -6.093155492 4.839649282 1.065055949 0.769643806 0.678616622 0.098174151 0.127624594 4.92902056 0.027670477 0.036589189 8.07E-07 6.093155492 -0.295412143 AFLS(ph)PPTLLEGPLR ddPTM_A459_MK2206_30min_R2 1 AFLSPPTLLEGPLR 14 0 G3V599;Q96PC5-6;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-14;Q96PC5-7;Q96PC5-12;Q96PC5 G3V599 MIA2 Melanoma inhibitory activity protein 2 1 AFLS(0.994)PPT(0.006)LLEGPLR 123.68 0.0019417 0 150940 86305 131060 134950 102050 147210 209890 118830 138480 143460 TRUE FALSE 162496.0825 82019.2192 135429.475 123924.1533 98043.00424 152812.1797 182331.1909 134361.489 150524.7401 138778.9119 1.170898951 0.591006357 0.975864943 0.892960981 0.706469037 1.101119598 1.313824906 0.96816935 1.084636981 1 17.08242884 -6.789158273 23.74701492 1.105328239 0.859524124 0.310981115 0.167618155 140.5158275 120379.6222 0.05662577 0.049953974 1.62E-07 6.789158273 -0.245804114 AFLSPPT(ph)LLEGPLRLSPLLPGGGGR ddPTM_A459_MK2206_30min_R1 1 AFLSPPTLLEGPLRLSPLLPGGGGR 25 1 G3V599;Q96PC5-6;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-14;Q96PC5-7;Q96PC5-12;Q96PC5 G3V599 MIA2 Melanoma inhibitory activity protein 2 1 AFLS(0.01)PPT(0.705)LLEGPLRLS(0.285)PLLPGGGGR 58.093 0.013492 5850600 1204.2 1872.9 1296.6 1398.8 2041.7 2242.9 1624.4 1395.4 1441.2 1472.5 TRUE FALSE 1101.776466 1750.97387 1208.590405 1506.535818 1960.374766 2369.89106 1516.03924 1383.200165 1591.017897 1654.924417 0.665756366 1.058038574 0.730299458 0.91033512 1.184570574 1.432023744 0.916077631 0.835808663 0.961384025 1 10.69254961 -6.035765191 8.881845208 1.057871493 0.838352905 0.259469821 0.181066341 0.595359649 141.9812954 0.057543129 0.075520803 9.21E-07 6.035765191 -0.219518587 AFMES(ph)PK ddPTM_A459_MK2206_30min_R2 2 AFMESPK 7 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AFMES(1)PK;AFMES(1)PK 82.75 0.040577 12126200 155233 115658 98381 116360 86834 76203 173921 142146 58004 120398 TRUE FALSE 167117.7578 109914.5919 101660.9734 106853.0158 83424.46085 79102.95856 151084.9638 160724.9703 63049.08307 116469.4231 1.43486379 0.943720583 0.872855473 0.917434061 0.716277789 0.67917361 1.29720711 1.37997567 0.541335926 1 16.82959173 -4.761633466 7.325457117 0.934019681 1.44378405 0.276379121 0.246111897 0.149593311 53.3143608 0.063536952 0.37924286 1.73E-05 4.761633466 0.509764369 AFMGT(ph)PVQK ddPTM_A459_MK2206_30min_R1 1 AFMGTPVQK 9 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AFMGT(1)PVQK 101.38 0.039931 28345000 2252.5 1976 1430.6 1655.1 1639 1785.5 1864.8 1496.8 1468.3 1174.9 TRUE FALSE 2060.913047 1847.362041 1333.494858 1782.576089 1573.715159 1886.593467 1740.402595 1483.713635 1620.935039 1320.455482 1.560759204 1.399033944 1.009874908 1.349970607 1.19179721 1.428744469 1.318032011 1.123637757 1.227557507 1 10.36681995 -10.19702623 0.039755158 1.70E-15 2.197760943 0.360329239 0.139489282 366.2318235 3.181562293 106.5935464 70.72667376 6.35E-11 10.19702623 2.197760943 AFMGT(ph)PVQK ddPTM_A459_MK2206_30min_R2 1 AFMGTPVQK 9 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AFMGT(1)PVQK 128.01 0.010349 35149000 76687 62508 50211 74616 52063 55222 75172 57646 34022 47182 TRUE FALSE 82558.21568 59403.94362 51885.00968 68519.63412 50018.74502 57323.51191 65301.8261 65180.53013 36981.17206 45642.4552 1.808803127 1.301506314 1.136770786 1.501225861 1.095881998 1.255925249 1.430725534 1.428068009 0.810236257 1 15.47808878 -4.766313613 4.262935542 1.237589336 1.860742963 0.432603936 0.203191661 0.210488505 7.816111133 0.048935991 0.407597031 1.71E-05 4.766313613 0.623153628 AFQLEEGEET(ph)EPDCK ddPTM_A459_MK2206_30min_R1 5 AFQLEEGEETEPDCK 15 0 P38432 P38432 COIL Coilin 1 AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK 264.52 1.68E-36 71490100 14164.3 16227.3 15988.5 15335.7 11791.1 11389.6 14636.6 12821.4 14282.1 13151.1 TRUE FALSE 12959.55191 15170.89982 14903.24517 16516.85827 11321.43552 12034.46931 13660.21912 12709.30385 15766.7754 14780.35755 0.876809093 1.026423059 1.008314252 1.117487057 0.76597846 0.814220445 0.924214389 0.85987797 1.066738429 1 13.85139355 -4.466577371 19.64779159 0.945384986 0.000374529 0.039253042 0.107241003 33824717.76 198578264.5 0.028211067 1318529935 3.42E-05 4.466577371 -0.945010458 AFQLEEGEET(ph)EPDCK ddPTM_A459_MK2206_30min_R2 4 AFQLEEGEETEPDCK 15 0 P38432 P38432 COIL Coilin 1 AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK 134.81 0.00098021 34201400 130301 144168 155360 127862 160454 125098 134720 103644 107825 138472 TRUE FALSE 140276.9447 137008.8268 160539.6249 117415.2656 154153.7697 129858.6921 117031.1022 117190.6267 117203.4236 133953.67 1.047204939 1.022807563 1.198471269 0.876536385 1.150799151 0.969429894 0.873668502 0.874859395 0.874954927 1 17.03137458 -6.990748832 7.293606373 0.898803257 1.055532608 0.412026625 0.086439018 0.129225192 40.3942129 0.029646201 0.025331311 1.02E-07 6.990748832 0.156729351 AFRLHS(ph)S(ph)LIQHQR ddPTM_A459_MK2206_30min_R1 2 AFRLHSSLIQHQR 13 1 Q9Y2G7 Q9Y2G7 ZFP30 Zinc finger protein 30 homolog 2 AFRLHS(1)S(1)LIQHQR;AFRLHS(1)S(1)LIQHQR 106.3 0.013823 269566000 16762.8 7162.2 6411.76 5954.58 31990 29435 29045 15771.7 5075.6 5929.42 TRUE FALSE 15337.03584 6695.939478 5976.547595 6413.202783 30715.77056 31101.58426 27107.46105 15633.80969 5603.226783 6664.001314 2.301475512 1.004792641 0.896840699 0.962365174 4.609208359 4.667103561 4.067745453 2.346009395 0.84082018 1 12.70217297 -6.235270013 24.72076994 3.133676105 1.242717977 0.261763348 1.311757158 854.7945318 807477.4271 0.411697863 0.531315299 5.82E-07 6.235270013 -1.890958128 AFS(ph)DPFVEAEK ddPTM_A459_MK2206_30min_R1 4 AFSDPFVEAEK 11 0 A0A087WYC1;P34932;A0A087WTS8;P34932-2 A0A087WYC1 HSPA4 Heat shock 70 kDa protein 4 1 AFS(1)DPFVEAEK;AFS(1)DPFVEAEK;AFS(1)DPFVEAEK;AFS(1)DPFVEAEK 204.32 1.78E-05 32696300 19641.6 21239.8 21935.3 18984.2 18039.4 15609.1 19030 19342.8 19074.3 17218.3 TRUE FALSE 17970.97878 19857.08516 20446.39295 20446.36637 17320.8525 16492.87375 17760.54342 19173.68794 21057.14174 19351.433 0.92866398 1.02612996 1.056582887 1.056581514 0.89506821 0.85228178 0.917789573 0.990814889 1.088143795 1 14.24015278 -3.849917698 14.88941772 0.978650516 0.984497588 0 0.074934178 0 0 0.018923701 0 0.000141281 3.849917698 0.005847072 AFS(ph)DPFVEAEK ddPTM_A459_MK2206_30min_R2 3 AFSDPFVEAEK 11 0 A0A087WYC1;P34932;A0A087WTS8;P34932-2 A0A087WYC1 HSPA4 Heat shock 70 kDa protein 4 1 AFS(1)DPFVEAEK;AFS(1)DPFVEAEK;AFS(1)DPFVEAEK 123.84 0.0034177 3397300 45408 51932 46554 45529 46581 34099 53351 40450 41490 56311 TRUE FALSE 48884.47139 49353.1324 48106.08712 41809.13506 44751.99589 35396.66134 46345.94961 45736.95389 45098.7252 54473.57668 0.897397865 0.90600132 0.883108657 0.767512207 0.821535846 0.649795066 0.85079689 0.839617236 0.827900937 1 15.73326898 -5.631168613 6.264213531 0.809929627 0.89985328 0.133766384 0.081646088 0.341124079 17.52840742 0.021659504 0.03785091 2.34E-06 5.631168613 0.089923653 AFS(ph)SPQEEEEAGFTGR ddPTM_A459_MK2206_30min_R1 2 AFSSPQEEEEAGFTGR 16 0 A0A024RAC6;Q14241 A0A024RAC6 TCEB3 Transcription elongation factor B polypeptide 3 1 AFS(0.5)S(0.5)PQEEEEAGFTGR;AFS(0.5)S(0.5)PQEEEEAGFTGR 254.72 5.72E-30 15923400 4277.9 4619.9 3650.01 3972 4561.6 4856.4 3992.2 3451.3 3416.7 2844.05 TRUE FALSE 3914.042141 4319.14367 3402.257491 4277.924128 4379.901813 5131.365171 3725.887622 3421.125648 3771.878192 3196.392385 1.224518666 1.351255775 1.064405455 1.33836013 1.370264124 1.605361468 1.165654016 1.070308409 1.18004229 1 11.64222881 -7.507907367 24.8306117 1.098701397 1.32324158 0.408976965 0.13293718 695.7965067 1154011.291 0.060180321 0.039009566 3.11E-08 7.507907367 0.224540182 AFS(ph)SPQEEEEAGFTGR ddPTM_A459_MK2206_30min_R2 1 AFSSPQEEEEAGFTGR 16 0 A0A024RAC6;Q14241 A0A024RAC6 TCEB3 Transcription elongation factor B polypeptide 3 1 AFS(0.5)S(0.5)PQEEEEAGFTGR 232.01 2.02E-15 8270900 16088 26487 18462 28210 23061 26257 32262 27005 15515 16651 TRUE FALSE 17319.70965 25171.6941 19077.51387 25905.15276 22155.50927 27256.22853 28025.96065 30534.64622 16864.46666 16107.67923 1.075245502 1.562713891 1.184373837 1.608248611 1.375462532 1.692126354 1.739913009 1.895657703 1.04698302 1 13.97546103 -3.947819938 0.860793037 1.520271228 1.22E-11 0.083816255 0.295070108 17.89539334 3.606899282 0.099011661 36.19521952 0.000112766 3.947819938 -1.520271228 AFS(ph)Y(ph)LKS(ph)FQRHERS(ph)HT(ph)GEK ddPTM_A459_MK2206_30min_R1 1 AFSYLKSFQRHERSHTGEK 19 3 Q3KP31;M0R0E8;Q3KP31-2 Q3KP31 ZNF791 Zinc finger protein 791 5 AFS(1)Y(1)LKS(1)FQRHERS(1)HT(1)GEK 43.408 0.046286 0 219.57 203.95 267.5 129.06 183.93 135.42 222.29 272.69 169.88 118.09 TRUE FALSE 200.8944185 190.6728179 249.3428453 139.0002236 176.6036786 143.0873634 207.4614397 270.3059001 187.5396339 132.7198807 1.513672386 1.436656037 1.87871511 1.047320287 1.330649769 1.078115521 1.563152698 2.03666473 1.413048542 1 7.052240685 -7.492618037 24.92278244 1.594895794 1.38291652 0.003110408 0.324990891 1729.949203 1424794.09 0.135330309 0.091092357 3.22E-08 7.492618037 -0.211979274 AFSASSASGAAGCCCASSGAGAAASSSSSSGS(ph)PHLYR ddPTM_A459_MK2206_30min_R1 2 AFSASSASGAAGCCCASSGAGAAASSSSSSGSPHLYR 37 0 Q15464;Q15464-2 Q15464 SHB SH2 domain-containing adapter protein B 1 AFSASSASGAAGCCCASSGAGAAASS(0.002)S(0.002)S(0.005)S(0.043)S(0.129)GS(0.819)PHLYR;AFSASSASGAAGCCCAS(0.008)S(0.001)GAGAAAS(0.045)S(0.034)S(0.019)S(0.048)S(0.062)S(0.113)GS(0.669)PHLY(0.001)R 151.26 1.55E-36 14446600 1403.11 709.44 975.01 686.82 1507.99 1380.86 1389.61 1416.35 845.97 784.76 TRUE FALSE 1283.768126 663.2553271 908.8290377 739.7189954 1447.923565 1459.0431 1296.911652 1403.967001 933.9116088 881.9819934 1.455549134 0.752005519 1.030439447 0.838700791 1.641670211 1.65427765 1.470451395 1.591831819 1.058878317 1 9.784605392 -6.2590221 24.99747691 1.448394454 1.00089497 0.311788798 0.273755528 225.2448615 2329292.88 0.079592654 0.097918365 5.51E-07 6.2590221 -0.447499484 AFSASSASGAAGCCCASSGAGAAASSSSSSGS(ph)PHLYR ddPTM_A459_MK2206_30min_R2 1 AFSASSASGAAGCCCASSGAGAAASSSSSSGSPHLYR 37 0 Q15464;Q15464-2 Q15464 SHB SH2 domain-containing adapter protein B 1 AFSASSASGAAGCCCASSGAGAAAS(0.001)S(0.006)S(0.005)S(0.007)S(0.012)S(0.067)GS(0.901)PHLY(0.001)R 115.33 4.61E-23 6294000 3957.2 8819.2 5881.9 11679 10473 15926 8915.6 6335.4 14712 5805.4 TRUE FALSE 4260.166275 8381.251352 6077.99961 10724.78834 10061.7774 16532.07509 7744.97101 7163.458533 15991.62317 5615.970273 0.758580631 1.492395961 1.082270617 1.909694642 1.791636513 2.943761146 1.379097579 1.275551362 2.84752632 1 12.45531958 -5.76452192 24.85686097 1.909660481 1.149213652 0.246203111 0.612275221 103.7739152 836819.7614 0.167035336 0.260193123 1.72E-06 5.76452192 -0.760446828 AFT(ph)AKTS(ph)CVRR ddPTM_A459_MK2206_30min_R1 1 AFTAKTSCVRR 11 2 J3QRB9;J3KTN6;J3QLV8;Q9Y5W9-2;Q9Y5W9 J3QRB9 SNX11 Sorting nexin-11 2 AFT(0.999)AKT(0.004)S(0.997)CVRR 136.53 0.021838 10510000 175.8 0 0 0 139.75 0 0 165.93 0 0 TRUE FALSE 160.8472868 0 0 0 134.1834616 0 0 164.4792915 0 0 0 AFVDFLSDEIKEER ddPTM_A459_MK2206_30min_R1 2 AFVDFLSDEIKEER 14 1 Q07021 Q07021 C1QBP "Complement component 1 Q subcomponent-binding protein, mitochondrial" 0 ; 220.37 2.20E-08 29427000 7967.7 8201.4 7619 7174.8 6995 7123.2 7725.4 6768.4 6737.9 7277.1 FALSE TRUE 7290.005275 7667.487369 7101.843508 7727.404339 6716.374338 7526.509428 7210.052662 6709.224592 7438.328817 8178.642087 0.891346656 0.937501273 0.868340176 0.944827302 0.821208981 0.920263945 0.881570875 0.820334784 0.909482129 1 12.99764561 AFVEDS(ph)EDEDGAGEGGSSLLQK ddPTM_A459_MK2206_30min_R1 4 AFVEDSEDEDGAGEGGSSLLQK 22 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1 A0A494C108 KRI1 Protein KRI1 homolog 1 AFVEDS(1)EDEDGAGEGGSSLLQK;AFVEDS(1)EDEDGAGEGGSSLLQK;AFVEDS(1)EDEDGAGEGGSSLLQK;AFVEDS(1)EDEDGAGEGGSSLLQK 189.07 7.30E-22 25725900 14409.4 14805.4 14798.8 12802.5 15648.5 14459.3 14739.1 13473.6 12810 11838.8 TRUE FALSE 13183.80486 13841.56577 13794.29869 13788.55077 15025.18711 15277.97307 13755.88153 13355.80174 14141.64534 13305.47992 0.990855267 1.040290606 1.036738154 1.036306157 1.129248039 1.148246674 1.033850835 1.003782037 1.062843687 1 13.69973293 -1.594369208 17.93818112 1.052081858 0.005255664 0 0.050067856 0 0 0.012321322 0 0.02544666 1.594369208 -1.046826194 AFVEDS(ph)EDEDGAGEGGSSLLQK ddPTM_A459_MK2206_30min_R2 2 AFVEDSEDEDGAGEGGSSLLQK 22 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1 A0A494C108 KRI1 Protein KRI1 homolog 1 AFVEDS(1)EDEDGAGEGGSSLLQK;AFVEDS(1)EDEDGAGEGGSSLLQK 138.54 7.82E-06 1518500 22967 27651 25504 31832 27887 22731 25668 22258.3 23985 29928 TRUE FALSE 24725.37118 26277.89155 26354.29063 29231.22377 26792.01626 23596.04413 22297.76077 25167.53623 26071.17195 28951.45181 0.854028715 0.907653672 0.910292541 1.009663486 0.925411839 0.815021101 0.770177638 0.869301353 0.900513457 1 14.82134808 -6.736386472 24.02482707 0.856532487 0.924931193 0.105237362 0.066768565 250.4652053 240185.772 0.022380538 0.022369689 1.83E-07 6.736386472 0.068398706 AFVGGGPQLLHGDTIYS(ph)GADR ddPTM_A459_MK2206_30min_R2 1 AFVGGGPQLLHGDTIYSGADR 21 0 Q9BPU9 Q9BPU9 B9D2 B9 domain-containing protein 2 1 AFVGGGPQLLHGDT(0.158)IY(0.136)S(0.706)GADR 51.089 0.037013 1712200 2601.7 2546.3 3443.6 3616.3 3540.6 3110.9 3969.5 2455.4 2325.2 5031.4 TRUE FALSE 2800.888152 2419.854445 3558.407905 3320.836722 3401.578254 3229.287479 3448.299882 2776.329211 2527.441693 4867.22583 0.575458845 0.497173242 0.731095706 0.682285318 0.698874137 0.663475991 0.708473369 0.570413066 0.519277671 1 12.248884 -11.4197915 2.534198758 1.201565784 0.632099201 0.669652746 0.078448958 13339755.1 7024713.512 16026960.41 0.021513878 3.80E-12 11.4197915 -0.569466583 AFYPEEISSMVLTK ddPTM_A459_MK2206_30min_R1 1 AFYPEEISSMVLTK 14 0 A0A0G2JIW1;P0DMV9;P0DMV8;Q53FA3;P34931 A0A0G2JIW1;Q53FA3 HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like 0 154.67 0.0047048 8056200 2819.5 2732.1 2841.7 3032.6 3265.8 2998.5 2874.9 3020.1 2223.3 2446.7 FALSE TRUE 2579.686719 2554.239793 2648.813321 3266.171377 3135.716271 3168.272479 2683.120667 2993.695584 2454.419991 2749.815668 0.938130781 0.928876733 0.963269412 1.187778299 1.140336899 1.152176313 0.975745647 1.088689551 0.89257619 1 11.4251192 -5.547472621 24.51781818 1.069996391 0.936646047 0.295859807 0.08440766 205.3923392 204756.0469 0.023628971 0.040928971 2.83E-06 5.547472621 -0.133350344 AGAAAGDS(ph)DEESRADDK ddPTM_A459_MK2206_30min_R1 1 AGAAAGDSDEESRADDK 17 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 AGAAAGDS(1)DEESRADDK 191.96 3.84E-07 2449300 475.54 435.47 596.79 449.49 591.67 374.53 506.52 356.71 516.05 512.99 TRUE FALSE 435.0928258 407.1208238 556.2815576 484.1097977 568.102531 395.7355649 472.730975 353.5913221 569.6952442 576.5430741 0.75465797 0.70614121 0.96485689 0.839676721 0.985360082 0.686393754 0.819940428 0.613295585 0.988122605 1 9.171284587 -8.473246566 24.00263502 1.000000394 0.803586002 0.336939855 0.110658948 235.3929111 113838.4336 0.107434159 0.027739381 3.36E-09 8.473246566 -0.196414392 AGAAS(ph)PLNSPLSSAVPSLGK ddPTM_A459_MK2206_30min_R1 2 AGAASPLNSPLSSAVPSLGK 20 0 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 AGAAS(1)PLNSPLSSAVPSLGK;AGAAS(0.515)PLNS(0.485)PLSSAVPSLGK 220.89 1.37E-19 56051000 11493 11602.2 12387.4 9475.3 10636.5 11473.5 12898.4 10270.6 13568.7 14525.7 TRUE FALSE 10515.46 10846.89467 11546.5778 10205.08925 10212.82568 12123.11965 12037.97127 10180.80523 14979.21492 16325.25338 0.644122315 0.664424277 0.707283221 0.625110619 0.625584513 0.742599173 0.737383426 0.623623107 0.917548694 1 13.99481776 -8.38146409 4.010856907 0.995280602 0.673895554 0.875154187 0.043802774 0.07341728 1.895275597 0.043710923 0.011544519 4.15E-09 8.38146409 -0.321385047 AGAAS(ph)PLNSPLSSAVPSLGK ddPTM_A459_MK2206_30min_R2 2 AGAASPLNSPLSSAVPSLGK 20 0 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 AGAAS(0.937)PLNS(0.063)PLSSAVPSLGK;AGAAS(0.999)PLNS(0.001)PLSSAVPSLGK 224.8 3.29E-20 61350000 136684 133961 137656 134748 127942 133062 144040 112491 120754 151933 TRUE FALSE 147148.6321 127308.6915 142245.3823 123738.6574 122918.3542 138125.7677 125127.375 127193.9599 131256.9646 146975.4387 1.001178384 0.866190247 0.967817369 0.841900242 0.836319016 0.939788096 0.851348879 0.86540963 0.893053736 1 17.16521556 -3.98044706 0.001188343 1.790770441 2.87E-08 0 0.061908668 7631648.205 1129.393876 841828.5659 860191.5315 0.000104605 3.98044706 -1.790770413 AGADGGT(ph)PTDR ddPTM_A459_MK2206_30min_R2 2 AGADGGTPTDR 11 0 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 AGADGGT(0.678)PT(0.322)DR;AGADGGT(0.927)PT(0.073)DR 116.84 0.0135 12218000 58389 45127 39120 50059 50292 39689 45399 59265 45516 56481 TRUE FALSE 62859.30673 42886.0588 40424.24127 45969.01957 48317.28338 41199.39271 39438.05677 67011.13899 49474.89941 54638.0296 1.150468038 0.784912251 0.739855401 0.841337433 0.884315993 0.754042432 0.721805985 1.226455996 0.905502994 1 15.73761784 -7.750428553 24.99947418 1.04948466 0.832102933 0.317509364 0.136989669 229.1525896 520281.1901 0.063721743 0.036338564 1.78E-08 7.750428553 -0.217381727 AGAES(ph)PTMSVDGR ddPTM_A459_MK2206_30min_R1 2 AGAESPTMSVDGR 13 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 AGAES(0.754)PT(0.244)MS(0.002)VDGR;AGAES(0.791)PT(0.209)MSVDGR 209.67 8.12E-06 110268000 6165.7 6415.6 6225 5000.4 5975.7 6228.4 6373.1 5153.6 5368.6 5122.1 TRUE FALSE 5641.274838 5997.943274 5802.464344 5385.531674 5737.675215 6581.046626 5947.962127 5108.542619 5926.685182 5756.664418 0.979955479 1.041912962 1.007955983 0.935529898 0.996701353 1.14320484 1.033230652 0.887413656 1.029534597 1 12.4910174 AGAES(ph)PTMSVDGR ddPTM_A459_MK2206_30min_R2 2 AGAESPTMSVDGR 13 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 AGAES(0.77)PT(0.229)MS(0.001)VDGR;AGAES(0.973)PT(0.027)MS(0.001)VDGR 193 0.00018333 91813000 101891 115509 109902 123224 135644 123356 140833 116283 107401 121697 TRUE FALSE 109691.8533 109772.991 113566.0778 113156.205 130317.935 128050.399 122341.4579 131481.5874 116742.5448 117726.0369 0.931755253 0.932444461 0.96466407 0.961182488 1.106959331 1.087698205 1.03920476 1.116843741 0.991645926 1 16.8450739 -6.158816836 5.60690191 1.063291157 0.94551231 0.643296683 0.039892366 0.13503358 6.089588453 0.011405723 0.014839545 6.94E-07 6.158816836 -0.117778847 AGAESPT(ph)MSVDGR ddPTM_A459_MK2206_30min_R2 1 AGAESPTMSVDGR 13 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 AGAES(0.171)PT(0.568)MS(0.261)VDGR 113.52 0.010617 55435000 50580 59340 56178 72796 69011 62603 74110 60409 52959 70767 TRUE FALSE 54452.44369 56393.26189 58050.94648 66848.33394 66301.28139 64985.40103 64379.26798 68304.66372 57565.27809 68457.87859 0.795415295 0.82376584 0.847980505 0.97648854 0.968497458 0.949275706 0.940421604 0.99776191 0.840886093 1 16.06292897 -5.643317413 4.18968688 0.953054223 0.814934732 0.665922612 0.042918966 0.122977677 3.840002648 0.011376064 0.020473351 2.27E-06 5.643317413 -0.138119491 AGAESPTMS(ph)VDGR ddPTM_A459_MK2206_30min_R2 1 AGAESPTMSVDGR 13 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 AGAES(0.266)PT(0.266)MS(0.467)VDGR 121.21 0.0028856 32237000 46958 55168 52357 63560 71692 55524 62877 45440 48229 68403 TRUE FALSE 50553.14058 52428.43734 54102.55625 58366.94468 68877.01186 57637.00473 54621.17437 51379.16402 52423.87124 66171.01571 0.763977098 0.792317252 0.817617134 0.882062094 1.040893979 0.871030981 0.825454677 0.776460259 0.792248248 1 16.0139118 AGAGMITQHS(ph)SNASPINR ddPTM_A459_MK2206_30min_R1 3 AGAGMITQHSSNASPINR 18 0 Q9NWH9;Q9NWH9-3;H7C3F4;H0YKH2 Q9NWH9 SLTM SAFB-like transcription modulator 1 AGAGMITQHS(0.408)S(0.408)NAS(0.183)PINR;AGAGMIT(0.002)QHS(0.382)S(0.382)NAS(0.235)PINR;AGAGMITQHS(0.942)S(0.023)NAS(0.035)PINR 166.34 9.77E-08 26762000 8650.1 5820.8 6813.3 5080.4 12182.2 12561.1 10207.2 7448.2 4447.44 4314.99 TRUE FALSE 7914.363572 5441.864862 6350.832179 5471.693288 11696.95718 13272.29863 9526.296312 7383.081173 4909.767303 4849.563538 1.631974406 1.122134976 1.309567785 1.12828572 2.411960806 2.736802709 1.964361584 1.522421784 1.012414265 1 12.24363919 -6.231843105 24.96913187 1.858373602 1.28625648 0.150996309 0.531657904 1215.604985 1025554.844 0.168231888 0.217151775 5.86E-07 6.231843105 -0.572117123 AGAGMITQHS(ph)SNASPINR ddPTM_A459_MK2206_30min_R2 1 AGAGMITQHSSNASPINR 18 0 Q9NWH9;Q9NWH9-3;H7C3F4;H0YKH2 Q9NWH9 SLTM SAFB-like transcription modulator 1 AGAGMITQHS(0.742)S(0.257)NAS(0.001)PINR 131.98 0.00033505 16421000 20936 50749 35333 80315 86092 132410 68943 42602 84828 28433 TRUE FALSE 22538.87626 48228.87846 36510.98459 73753.00759 82711.5955 137448.9553 59890.70128 48170.22767 92206.18611 27505.23354 0.819439552 1.7534437 1.327419545 2.681417247 3.007122095 4.997192812 2.177429295 1.75131135 3.352314241 1 14.74741853 -5.785723211 4.935204083 2.837851184 1.33278065 0.281332441 1.019715884 0.236202513 14.51566828 0.293863032 0.468111594 1.64E-06 5.785723211 -1.505070534 AGAGMITQHSS(ph)NASPINR ddPTM_A459_MK2206_30min_R2 1 AGAGMITQHSSNASPINR 18 0 Q9NWH9;Q9NWH9-3;H7C3F4;H0YKH2 Q9NWH9 SLTM SAFB-like transcription modulator 1 AGAGMITQHS(0.23)S(0.744)NAS(0.026)PINR 106.7 0.0010862 16748000 15519 45347 21569 68548 63521 128890 53460 41682 70288 20856 TRUE FALSE 16707.14657 43095.13392 22288.09969 62947.40913 61026.84637 133794.9993 46440.63778 47129.98052 76401.52319 20175.47043 0.828092045 2.136016311 1.104712764 3.119997095 3.024804135 6.631567762 2.301836676 2.336004044 3.786852131 1 14.30031469 -5.816568884 5.785216297 3.343742432 1.434592248 0.254148933 1.40362976 0.259099947 18.09317599 0.400035071 0.610027493 1.53E-06 5.816568884 -1.909150185 AGAGMITQHSSNAS(ph)PINR ddPTM_A459_MK2206_30min_R1 3 AGAGMITQHSSNASPINR 18 0 Q9NWH9;Q9NWH9-3;H7C3F4;H0YKH2 Q9NWH9 SLTM SAFB-like transcription modulator 1 AGAGMITQHSSNAS(1)PINR;AGAGMITQHSSNAS(1)PINR;AGAGMITQHS(0.134)S(0.134)NAS(0.732)PINR 189.56 2.20E-10 12699300 5583.5 3664.01 3685.3 3402.83 8068.7 7558.8 6725.5 4409 3703.3 3203.34 TRUE FALSE 5108.594005 3425.482283 3435.152104 3664.916556 7747.306593 7986.772724 6276.854166 4370.452578 4088.271287 3600.193943 1.418977446 0.951471598 0.954157514 1.017977535 2.151913679 2.218428465 1.743476675 1.213949206 1.135569736 1 11.81385891 -6.218119385 24.87440101 1.62829359 1.066669855 0.260561343 0.399666946 600.0455325 344546.6775 0.127990319 0.165233741 6.05E-07 6.218119385 -0.561623735 AGALHAQVER ddPTM_A459_MK2206_30min_R1 1 AGALHAQVER 10 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 0 125.74 0.0050233 1096700 1130.8 976.43 862.48 793.68 1182 1247.4 927.06 1046.6 1190.9 1085.5 FALSE TRUE 1034.619522 912.8642295 803.9372606 854.8093711 1134.918437 1318.02671 865.2175189 1037.449687 1314.698317 1219.979935 0.848062736 0.748261675 0.658975806 0.700674943 0.930276314 1.080367531 0.709206352 0.850382581 1.077639295 1 10.2526417 -6.267475274 23.92049796 0.92917865 0.733940209 0.438628726 0.111564978 281.2608854 1114646.794 0.035598324 0.041454526 5.40E-07 6.267475274 -0.195238441 AGAPGALS(ph)PSYDGGLHGLQSK ddPTM_A459_MK2206_30min_R1 3 AGAPGALSPSYDGGLHGLQSK 21 0 K7ENH8;A0A0A0MRB7;P15923-2;X6REB3;P15923;P15923-3 K7ENH8 TCF3 Transcription factor E2-alpha 1 AGAPGALS(0.974)PS(0.026)YDGGLHGLQSK;AGAPGALS(1)PSYDGGLHGLQSK;AGAPGALS(0.619)PS(0.38)Y(0.001)DGGLHGLQSK 199.87 7.55E-17 63319500 20158.7 15822.9 18782.8 14769.9 21165.1 18290.8 19935.9 19053.4 16232.1 15112.4 TRUE FALSE 18444.09671 14792.82633 17507.87587 15907.48026 20322.04925 19326.40929 18606.01249 18886.81813 17919.48488 16984.6382 1.085928148 0.870953279 1.030806524 0.93658046 1.196495857 1.13787583 1.09546122 1.111994139 1.055040718 1 14.05194287 -6.247502783 24.99443824 1.106796727 0.976754642 0.395163462 0.071344194 731.0394066 1311074.908 0.020029568 0.025726386 5.66E-07 6.247502783 -0.130042085 AGAPGALS(ph)PSYDGGLHGLQSK ddPTM_A459_MK2206_30min_R2 4 AGAPGALSPSYDGGLHGLQSK 21 0 K7ENH8;A0A0A0MRB7;P15923-2;X6REB3;P15923;P15923-3 K7ENH8 TCF3 Transcription factor E2-alpha 1 AGAPGALS(1)PSYDGGLHGLQSK;AGAPGALS(0.999)PS(0.001)YDGGLHGLQSK;AGAPGALS(0.939)PS(0.059)Y(0.001)DGGLHGLQSK;AGAPGALS(0.5)PS(0.5)YDGGLHGLQSK 158.11 9.81E-08 80529500 164210 218075 179693 223778 210478 209716 221467 182970 195531 196226 TRUE FALSE 176782.0439 207245.7126 185683.8749 205494.6216 202213.5762 217696.8893 192388.1169 206884.8072 212537.9329 189823.1617 0.931298595 1.091783061 0.978193985 1.082558207 1.06527346 1.146840498 1.01351234 1.08988179 1.119662801 1 17.53429651 -4.085889735 1.917947874 1.068151049 1.64E-30 0.362578033 0.051681024 12.37868956 6.401527279 0.013406813 45.21869884 8.21E-05 4.085889735 -1.068151049 AGAPVGGS(ph)PGLAK ddPTM_A459_MK2206_30min_R1 2 AGAPVGGSPGLAK 13 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 AGAPVGGS(1)PGLAK;AGAPVGGS(1)PGLAK 171.36 0.00020382 29941000 9148.2 8270.4 9100.9 7516.2 7119.2 7258.7 7990.3 7905.1 7251.8 6838.9 TRUE FALSE 8370.097551 7731.995457 8483.156265 8095.099026 6835.627189 7669.681321 7457.281666 7835.986544 8005.650561 7686.154563 1.088983767 1.005964087 1.103693166 1.05320534 0.889342926 0.997856764 0.970222704 1.019493751 1.04156773 1 12.90804627 -6.03312786 24.99746223 0.98570786 1.063232168 0.417953865 0.044406681 631.9984668 476889.2395 0.013184387 0.01703343 9.27E-07 6.03312786 0.077524308 AGAPVGGS(ph)PGLAK ddPTM_A459_MK2206_30min_R2 3 AGAPVGGSPGLAK 13 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 AGAPVGGS(1)PGLAK;AGAPVGGS(1)PGLAK;AGAPVGGS(1)PGLAK 182.72 0.00011855 54500000 134774 130387 120383 135816 119705 117964 158601 102639 94710 127692 TRUE FALSE 145092.4011 123912.1712 124396.5091 124719.3983 115004.7802 122453.2027 137776.4982 116054.2697 102947.7046 123525.4205 1.174595484 1.00313094 1.007051898 1.009665847 0.93102116 0.991319861 1.115369595 0.939517301 0.833413108 1 16.91444844 AGAVTST(ph)PNR ddPTM_A459_MK2206_30min_R1 1 AGAVTSTPNR 10 0 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 AGAVT(0.038)S(0.023)T(0.939)PNR 119.34 0.012704 7656600 5199 5844.4 5754.8 5367.9 6128.7 5751.1 6151.6 5472.9 3564.3 4142.5 TRUE FALSE 4756.797749 5463.928498 5364.18021 5781.336588 5884.580901 6076.722312 5741.237988 5425.051012 3934.82174 4655.704174 1.021713917 1.173598728 1.152173766 1.241774901 1.263950775 1.305220883 1.233162111 1.165248222 0.845161461 1 12.18478368 -8.175489065 5.519679557 0.924776344 1.203431851 0.643830952 0.080983349 0.131628713 6.342609815 0.060470228 0.021821701 6.68E-09 8.175489065 0.278655507 AGAVTST(ph)PNR ddPTM_A459_MK2206_30min_R2 1 AGAVTSTPNR 10 0 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 AGAVT(0.004)S(0.003)T(0.993)PNR 117.14 0.014307 17809000 120370 138010 155970 165690 149450 155000 145590 124610 169770 127290 TRUE FALSE 129585.6197 131156.6241 161169.962 152152.597 143581.8421 160898.6336 126473.8581 140896.9549 184536.2877 123136.5377 1.052373423 1.065131654 1.308871964 1.235641344 1.166037674 1.306668488 1.027102601 1.144233527 1.498631447 1 16.90989938 -5.174637422 8.60035952 1.212105608 1.057081797 0.165367377 0.136734837 0.6147378 56.04454482 0.033635188 0.089675471 6.69E-06 5.174637422 -0.155023812 AGCFS(ph)PK ddPTM_A459_MK2206_30min_R2 2 AGCFSPK 7 0 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 AGCFS(1)PK;AGCFS(1)PK 93.649 0.025432 35791000 200368 211107 181658 161431 177522 118687 227159 176542 143142 207060 TRUE FALSE 215708.3281 200623.7334 187714.3871 148241.5709 170551.5943 123203.717 197332.7504 199616.6456 155592.2324 200303.6492 1.076906632 1.001597995 0.937149113 0.740084225 0.851465238 0.615084735 0.985168025 0.996570189 0.776781816 1 17.61182918 -3.270439006 10.07878473 0.890820192 1.020371587 0 0.13941162 0 0 0.033177636 0 0.000536489 3.270439006 0.129551395 AGDGSS(ph)VKEVETYHR ddPTM_A459_MK2206_30min_R2 1 AGDGSSVKEVETYHR 15 1 Q6PL18 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 AGDGS(0.196)S(0.804)VKEVETYHR 63.16 0.031387 3046000 23089 34968 38631 32468 36397 30399 43568 31572 31996 34808 TRUE FALSE 24856.71159 33231.53997 39918.93826 29815.26054 34967.8709 31555.85525 37847.46927 35698.5688 34778.95424 33672.21781 0.738196448 0.986912717 1.185515563 0.885455799 1.038478401 0.937148109 1.123996925 1.060178721 1.03286794 1 15.03927113 -4.781519465 4.349329164 1.033009131 0.71714994 0.544129027 0.080384709 0.145661427 5.719115293 0.019585085 0.14018877 1.65E-05 4.781519465 -0.315859192 AGDLLEDS(ph)PK ddPTM_A459_MK2206_30min_R1 13 AGDLLEDSPK 10 0 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK 156.36 0.00051 4506295700 59363.6 92272.6 87406.8 65231.9 37545.9 34699.2 53313.2 48152.2 85729.9 96359.5 TRUE FALSE 54314.41409 86265.63697 81473.86995 70256.07224 36050.3673 36663.83872 49756.7737 47731.21039 94641.82989 108297.2423 0.501530906 0.796563561 0.752317124 0.648733714 0.332883521 0.338548221 0.459446359 0.440742621 0.873908032 1 16.72463698 -8.402776537 4.272190648 0.993537037 0.538829284 0.540583658 0.150293138 0.191617415 5.36395486 0.167049372 0.043829284 3.96E-09 8.402776537 -0.454707753 AGDLLEDS(ph)PK ddPTM_A459_MK2206_30min_R2 7 AGDLLEDSPK 10 0 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK 138.2 0.0016624 2980699000 1156334 789552 1026536 667281 659672 456449 936857 774934 527960 1028377 TRUE FALSE 1244863.82 750343.9958 1060760.198 612762.0078 633769.9627 473819.4865 813846.5505 876220.5345 573881.0065 994821.1427 1.251344354 0.75425015 1.066282322 0.615951935 0.637069253 0.476286104 0.818083287 0.880781979 0.576868526 1 19.92407764 -5.759570969 24.99781307 0.701139318 0.9969881 0.366043895 0.184675323 54.371583 727423.3153 0.049778132 0.080894424 1.74E-06 5.759570969 0.295848782 AGDLLEDS(ph)PKRPK ddPTM_A459_MK2206_30min_R1 3 AGDLLEDSPKRPK 13 2 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK 199.38 0.0043626 1348190000 27891.5 30907.5 33441.7 33056.6 22752.6 17848.7 22079.2 27586.3 21116.4 13646.8 TRUE FALSE 25519.18146 28895.41613 31171.77058 35602.62506 21846.31576 18859.27797 20606.33685 27345.11589 23311.52535 15337.46861 1.663845717 1.883975567 2.032393439 2.321284298 1.424375581 1.229621292 1.343529195 1.78289629 1.519906963 1 13.90477277 -6.291317602 22.16766458 1.412851303 1.972918847 0.587989099 0.24200927 134.150388 99529.99625 0.078161317 0.088651621 5.11E-07 6.291317602 0.560067544 AGDLLEDS(ph)PKRPK ddPTM_A459_MK2206_30min_R2 3 AGDLLEDSPKRPK 13 2 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK 184.51 0.0040327 541047000 190180 327205 280910 256814 315199 199750 329666 243214 235567 255925 TRUE FALSE 204740.327 310956.4755 290275.3992 235831.4747 302822.7035 207351.6262 286380.4582 275002.9049 256056.1919 247574.1882 0.826985755 1.25601331 1.172478445 0.95256891 1.223159432 0.837533297 1.156746025 1.110789888 1.034260452 1 17.91750138 AGDNIPEEQPVASTPTTVS(ph)DGENKKDK ddPTM_A459_MK2206_30min_R2 1 AGDNIPEEQPVASTPTTVSDGENKKDK 27 2 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 AGDNIPEEQPVAS(0.077)T(0.063)PT(0.161)T(0.161)VS(0.538)DGENKKDK 57.21 0.0030571 8656900 43607 13339 22997 15100 19013 12948 46305 17744 19876 29725 TRUE FALSE 46945.58545 12676.60466 23763.7085 13866.2817 18266.45409 13440.74521 40225.09788 20063.20172 21604.77855 28755.07568 1.6326017 0.44084755 0.826417874 0.482220316 0.635242775 0.46742166 1.398886872 0.697727314 0.751337913 1 14.81152901 -7.191952159 24.99964971 0.936834091 0.719954239 0.070709956 0.368604384 472.292561 169917.4651 0.137265799 0.106325629 6.43E-08 7.191952159 -0.216879853 AGDPGEMPQS(ph)PTGLGQPK ddPTM_A459_MK2206_30min_R1 5 AGDPGEMPQSPTGLGQPK 18 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9;H0YHL2 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 AGDPGEMPQS(0.961)PT(0.039)GLGQPK;AGDPGEMPQS(0.669)PT(0.331)GLGQPK;AGDPGEMPQS(0.966)PT(0.034)GLGQPK;AGDPGEMPQS(0.994)PT(0.006)GLGQPK;AGDPGEMPQS(0.5)PT(0.5)GLGQPK 269.34 6.07E-54 77409800 20529.9 19923.6 18599.8 15917.8 17598.9 16818.5 16489 16282.9 16020.5 13619.2 TRUE FALSE 18783.7242 18626.57002 17337.2974 17143.79171 16897.89855 17770.74894 15389.0489 16140.54032 17685.8883 15306.44932 1.227177108 1.21690992 1.132679241 1.12003714 1.103972463 1.16099747 1.005396391 1.054492782 1.155453361 1 13.90185203 -1.522878745 0.223130592 1.031671974 2.157144996 0.605622185 0.046997642 35.09150092 0.452093174 0.072392803 14.28444457 0.03 1.522878745 1.125473022 AGDPGEMPQS(ph)PTGLGQPK ddPTM_A459_MK2206_30min_R2 7 AGDPGEMPQSPTGLGQPK 18 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9;H0YHL2 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 AGDPGEMPQS(0.785)PT(0.215)GLGQPK;AGDPGEMPQS(0.635)PT(0.365)GLGQPK;AGDPGEMPQS(0.983)PT(0.017)GLGQPK;AGDPGEMPQS(0.984)PT(0.016)GLGQPK;AGDPGEMPQS(0.901)PT(0.099)GLGQPK;AGDPGEMPQS(0.992)PT(0.008)GLGQPK;AGDPGEMPQS(0.967)PT(0.033)GLGQPK 227.64 1.10E-18 150562200 466733 471123 462983 462564 456230 385772 506183 397404 347099 462440 TRUE FALSE 502466.4373 447727.7169 478418.6221 424771.0415 438316.1178 400452.8238 439720.5641 449346.0673 377289.0436 447350.6207 1.123204963 1.000842955 1.069448884 0.949525991 0.979804425 0.895165459 0.982943901 1.004460588 0.843385537 1 18.77104649 -4.124735039 0.556171064 0.944463288 1.371804969 0.477715756 0.054322876 6.795389183 0.931962259 0.027390482 2.199408907 7.50E-05 4.124735039 0.427341682 AGDPGEMPQSPT(ph)GLGQPK ddPTM_A459_MK2206_30min_R1 1 AGDPGEMPQSPTGLGQPK 18 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9;H0YHL2 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 AGDPGEMPQS(0.28)PT(0.72)GLGQPK 224.99 9.28E-15 16355000 5247.3 5735 5487.5 4144.5 4551.4 4866.6 4896.6 4694.8 4826.4 3896.1 TRUE FALSE 4800.98958 5361.650458 5115.023789 4463.710108 4370.1081 5142.142686 4569.956748 4653.753859 5328.121551 4378.778282 1.096422169 1.22446265 1.168139481 1.019396238 0.998019954 1.174332737 1.04366023 1.062797328 1.216805512 1 12.09631269 -5.735203519 23.91755042 1.075993608 1.169153715 0.235169933 0.073570602 195.7039193 178408.0291 0.019710835 0.03412198 1.84E-06 5.735203519 0.093160108 AGDPGEMPQSPT(ph)GLGQPK ddPTM_A459_MK2206_30min_R2 4 AGDPGEMPQSPTGLGQPK 18 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9;H0YHL2 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 AGDPGEMPQS(0.007)PT(0.993)GLGQPK;AGDPGEMPQS(0.011)PT(0.989)GLGQPK;AGDPGEMPQS(0.094)PT(0.906)GLGQPK;AGDPGEMPQS(0.096)PT(0.904)GLGQPK 140.01 0.0032771 47538800 177330 187661 173112 179650 184649 157888 197837 139682 131454 167243 TRUE FALSE 190906.5211 178342.0276 178883.4677 164972.0203 177398.7525 163896.5385 171860.7643 157938.917 142887.6313 161785.8746 1.179994988 1.102333736 1.105680382 1.019693596 1.096503344 1.013046033 1.062272987 0.976221919 0.883189782 1 17.30372613 -5.602201918 0.343200457 0.950589138 1.236559187 0.654418063 0.046560415 2.471518327 0.356537308 0.050081174 0.28034458 2.50E-06 5.602201918 0.285970049 AGDPTIQQIS(ph)SR ddPTM_A459_MK2206_30min_R2 1 AGDPTIQQISSR 12 0 K7EMC0 K7EMC0 CHD5 1 AGDPT(0.183)IQQIS(0.409)S(0.409)R 81.239 0.038617 8510400 26841 38381 37865 36547 38993 34628 42663 35276 32380 33541 TRUE FALSE 28895.9676 36475.05535 39127.4002 33560.99319 37461.9389 35945.7928 37061.29685 39886.69432 35196.35387 32446.55992 0.89057107 1.12415786 1.205902885 1.034346731 1.15457352 1.107846037 1.142225769 1.22930426 1.084748397 1 14.98577791 -4.76195186 7.441365209 1.129116622 0.886611743 0.511015627 0.06695367 0.075396068 29.20736116 0.015672388 0.092583982 1.73E-05 4.76195186 -0.242504879 AGDRNS(ph)EDDGVVMTFSSVK ddPTM_A459_MK2206_30min_R1 5 AGDRNSEDDGVVMTFSSVK 19 1 Q9NY61 Q9NY61 AATF Protein AATF 1 AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK 136.61 9.51E-05 119181000 19292.1 19897.8 21626 12483.6 15555.6 18416.4 25681.1 17241.7 25678.6 35153.2 TRUE FALSE 17651.20559 18602.4496 20158.08737 13445.08904 14935.98751 19459.12065 23967.96068 17090.95763 28347.98236 39508.24381 0.446772721 0.470849823 0.51022484 0.340310977 0.378047366 0.492533172 0.606657203 0.432592188 0.71752069 1 15.2698661 -8.732551985 0.837761437 1.005037659 0.441221851 0.84663492 0.072402663 0.339626496 0.485620216 0.072783043 0.025380278 1.85E-09 8.732551985 -0.563815808 down AGDRNS(ph)EDDGVVMTFSSVK ddPTM_A459_MK2206_30min_R2 12 AGDRNSEDDGVVMTFSSVK 19 1 Q9NY61 Q9NY61 AATF Protein AATF 1 AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(0.998)EDDGVVMT(0.001)FSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(0.996)EDDGVVMT(0.004)FSSVK 126.25 0.0017683 95839600 528529 404624.7 463403 431284 378191 338062.3 499736 358485 297709.7 530110 TRUE FALSE 568993.5866 384531.6258 478852.6247 396046.7176 363341.3211 350927.4977 434120.0629 405340.2204 323603.9516 512812.5541 1.109554714 0.749848308 0.93377711 0.772303085 0.708526572 0.684319241 0.846547261 0.790425697 0.631037499 1 18.96807206 -2.659459035 1.494986269 0.778113461 199.9904757 0.418244543 0.109055801 796.3175688 3.867845326 0.029495844 542018.0728 0.002190488 2.659459035 199.2123622 AGDSAVLVLPPS(ph)PGPR ddPTM_A459_MK2206_30min_R1 1 AGDSAVLVLPPSPGPR 16 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;A0A087WVI1 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 AGDSAVLVLPPS(1)PGPR 178.01 1.13E-06 18068000 4101.4 4068.9 4082.7 3134.5 3650.5 3910.4 3378.1 3376.5 2634.6 2374.8 TRUE FALSE 3752.554393 3804.01387 3805.577699 3375.919733 3505.092855 4131.803469 3152.753113 3346.979616 2908.476098 2669.008153 1.405973372 1.425253747 1.425839668 1.264859281 1.313256706 1.548067009 1.181245216 1.254016258 1.089721699 1 11.382088 -8.050571547 1.014150643 1.003735508 1.389229078 0.707317306 0.086440874 0.28651229 0.556632142 0.080719369 0.029224905 8.90E-09 8.050571547 0.385493571 AGDSAVLVLPPS(ph)PGPR ddPTM_A459_MK2206_30min_R2 4 AGDSAVLVLPPSPGPR 16 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;A0A087WVI1 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR 160.93 5.05E-05 22436400 84483 97159 82339 96667 108091 98308 113361 84415 86000 88420 TRUE FALSE 90951.08344 92334.22534 85084.14116 88768.99688 103846.8042 102049.1798 98476.56453 95448.33034 93480.12455 85534.86264 1.063321792 1.079492297 0.994730552 1.037810714 1.214087461 1.193071184 1.15130324 1.115899732 1.092889164 1 16.38422494 -6.227552558 24.63406064 1.138101331 1.04287775 0.319963602 0.05889084 576.9102485 419385.4071 0.017493799 0.022582844 5.92E-07 6.227552558 -0.095223581 AGDT(ph)SDQEGHSLEEK ddPTM_A459_MK2206_30min_R2 1 AGDTSDQEGHSLEEK 15 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 AGDT(0.62)S(0.38)DQEGHSLEEK 196.45 7.35E-05 7534200 36398 42504 37834 36925 42028 30164 44505 30996 31700 36769 TRUE FALSE 39184.65887 40393.31317 39095.36668 33908.10938 40377.76955 31311.91216 38661.44004 35047.28363 34457.2087 35569.23054 1.101644828 1.135625161 1.099134451 0.953298929 1.135188165 0.880308955 1.086934956 0.985325887 0.96873641 1 15.11834214 -5.642176627 6.346729968 1.0051286 1.118070264 0.368595445 0.066529956 0.215032181 11.03638036 0.017013883 0.029695939 2.28E-06 5.642176627 0.112941664 AGDTS(ph)DQEGHSLEEK ddPTM_A459_MK2206_30min_R1 2 AGDTSDQEGHSLEEK 15 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 AGDT(0.005)S(0.995)DQEGHSLEEK;AGDT(0.044)S(0.956)DQEGHSLEEK 212.03 8.41E-07 12721100 7239.1 7902.6 7922.8 6679.9 7383.3 6709.3 6569 7194 6523.5 6573 TRUE FALSE 6623.376531 7388.139304 7385.02241 7194.387055 7089.207527 7089.174768 6130.793996 7131.103616 7201.64117 7387.312864 0.896588063 1.000111873 0.999689948 0.97388417 0.959646309 0.959641875 0.829908535 0.965317667 0.974866139 1 12.85083396 -7.017948461 24.75863543 0.933224658 0.969136777 0.032397999 0.050165742 1651.811513 2278553.378 0.018994356 0.015033799 9.60E-08 7.017948461 0.035912119 AGDTS(ph)DQEGHSLEEK ddPTM_A459_MK2206_30min_R2 1 AGDTSDQEGHSLEEK 15 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 AGDT(0.042)S(0.958)DQEGHSLEEK 205.12 4.27E-06 7379600 32629 48964 41711 49407 43940 44773 49795 36725 31017 50976 TRUE FALSE 35127.10133 46532.51896 43101.62392 45370.29005 42214.69482 46476.86789 43256.85669 41525.0836 33714.80259 49312.65729 0.712334383 0.943622216 0.874047887 0.920053644 0.856062057 0.942493681 0.877195817 0.84207759 0.683694703 1 15.58967038 -10.17223561 5.960675971 1.000000001 0.859126436 0.215368664 0.084246759 1.41E-09 4.01E-10 0.080240059 0.019461073 6.73E-11 10.17223561 -0.140873565 AGEAPTENPAPPTQQS(ph)SAE ddPTM_A459_MK2206_30min_R2 1 AGEAPTENPAPPTQQSSAE 19 0 P16989-2;P16989 P16989-2 YBX3 Y-box-binding protein 3 1 AGEAPTENPAPPTQQS(0.5)S(0.5)AE 100.97 0.0028973 0 17188 25770 21614 27991 24098 26151 25637 20475 19129 24163 TRUE FALSE 18503.9265 24490.29927 22334.59997 25704.04576 23151.79144 27146.19463 22270.8311 23151.1528 20792.80584 23374.56329 0.791626619 1.047732913 0.95550876 1.099658866 0.990469475 1.161356227 0.952780629 0.990442154 0.88954842 1 14.51265179 -4.755920378 24.98561144 1.012897144 0.791626265 0.441325359 0.073537155 164.8128063 746061.1842 0.018047026 0.153280687 1.75E-05 4.755920378 -0.221270879 AGEARPGPTAES(ph)ASGPSEDPSVNFLK ddPTM_A459_MK2206_30min_R1 1 AGEARPGPTAESASGPSEDPSVNFLK 26 1 Q13501;Q13501-2;E7EMC7;E9PFW8 Q13501 SQSTM1 Sequestosome-1 1 AGEARPGPT(0.449)AES(0.493)AS(0.058)GPSEDPSVNFLK 91.123 1.96E-05 8219400 797.58 827.05 746.5 960.24 769.17 598.23 720.14 818.89 556.68 454.3 TRUE FALSE 729.7416327 773.2088947 695.8296599 1034.197851 738.5323302 632.1012656 672.1007746 811.7305311 614.5488781 510.5821138 1.429234619 1.514367374 1.362816364 2.025526988 1.446451629 1.238001192 1.316342184 1.589813879 1.203623984 1 8.995999189 -6.522346122 24.97964534 1.312997314 1.584062376 0.311316519 0.215606746 27.24866531 1278031.011 0.070529268 0.071316608 3.00E-07 6.522346122 0.271065062 AGEIS(ph)GEVSTGSPQK ddPTM_A459_MK2206_30min_R1 1 AGEISGEVSTGSPQK 15 0 C9K0U2 C9K0U2 FBXO24 1 AGEIS(0.906)GEVS(0.031)T(0.031)GS(0.031)PQK 85.271 0.02089 8993800 1940.4 2089 1896.4 1946.7 1453.2 1327.6 1520.9 1743.9 1439.4 1629.8 TRUE FALSE 1775.358791 1953.00572 1767.677652 2096.635171 1395.315967 1402.767565 1419.443536 1728.653266 1589.030781 1831.711928 0.969234716 1.066218814 0.965041295 1.1446315 0.761755135 0.765823241 0.774927277 0.943736425 0.867511292 1 10.83897691 -6.267240385 24.99802543 0.841287352 1.033331364 0.517506222 0.08662466 373.6075663 1609969.136 0.026680036 0.03108065 5.40E-07 6.267240385 0.192044012 AGELTEDEVER ddPTM_A459_MK2206_30min_R1 1 AGELTEDEVER 11 0 P62269 P62269 RPS18 40S ribosomal protein S18 0 167.93 0.0070407 13389000 1111.6 1335.8 1520.4 1206.2 1222.8 1380.2 1216 1299 1187.5 1077 FALSE TRUE 1017.052583 1248.839177 1417.199484 1299.101733 1174.093287 1458.345731 1134.882859 1287.64298 1310.944875 1210.426891 0.840242885 1.031734495 1.170826173 1.073259147 0.969982818 1.204819343 0.937588934 1.063792443 1.083043416 1 10.24130023 -4.779023427 4.371867674 1.064986651 0.823884416 0.419769629 0.077944777 0.183339643 7.354752763 0.018763414 0.136023694 1.66E-05 4.779023427 -0.241102235 AGELTEDEVER ddPTM_A459_MK2206_30min_R2 2 AGELTEDEVER 11 0 P62269 P62269 RPS18 40S ribosomal protein S18 0 ; 143.5 0.011552 56971000 64721 85689 69590 80399 63548 74440 82253 61273 56176 65641 FALSE TRUE 69676.08952 81433.80886 71910.09587 73830.14452 61052.78622 77272.86636 71453.0823 69281.59148 61062.08694 63499.13955 1.097276121 1.282439564 1.1324578 1.162695196 0.961474229 1.216912023 1.125260638 1.091063469 0.961620699 1 15.95444942 -7.505486307 0.340691674 0.976938014 1.195867932 0.319395636 0.082870423 1.762888194 0.581530295 0.114487973 0.135343609 3.12E-08 7.505486307 0.218929918 AGEPDGES(ph)LDEQPSSSSSK ddPTM_A459_MK2206_30min_R1 5 AGEPDGESLDEQPSSSSSK 19 0 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 AGEPDGES(1)LDEQPSSSSSK;AGEPDGES(1)LDEQPSSSSSK;AGEPDGES(1)LDEQPSSSSSK;AGEPDGES(1)LDEQPSSSSSK;AGEPDGES(0.76)LDEQPS(0.154)S(0.046)S(0.014)S(0.019)S(0.006)K 234.38 2.03E-40 60578000 8495.12 13096.24 14888.72 13881.18 13876.57 13866.91 16234.94 13510.63 15725.22 15526.74 TRUE FALSE 7772.565434 12243.6724 13878.11517 14950.31089 13323.83683 14652.04246 15151.93677 13392.50799 17359.91289 17450.30977 0.445411316 0.701630662 0.795293341 0.856736132 0.763530104 0.839643688 0.868290418 0.767465344 0.994819755 1 14.09096503 -4.467735185 1.047439614 0.85964452 1.62E-22 0.749985534 0.075022431 1.54989227 0.895664461 0.022643578 1.739078104 3.41E-05 4.467735185 -0.85964452 down AGEPDGES(ph)LDEQPSSSSSK ddPTM_A459_MK2206_30min_R2 4 AGEPDGESLDEQPSSSSSK 19 0 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 AGEPDGES(1)LDEQPSSSSSK;AGEPDGES(1)LDEQPSSSSSK;AGEPDGES(1)LDEQPSSSSSK;AGEPDGES(1)LDEQPSSSSSK 218.25 4.02E-19 133107000 323593 463674 496622 530430 503074 434165 641576 439792 407749 530106 TRUE FALSE 348367.5289 440648.6234 513179.1296 487092.1722 483320.787 450687.4533 557336.3005 497274.3244 443214.271 512808.6846 0.67933235 0.859284635 1.000722384 0.949851644 0.942497273 0.878860805 1.086830854 0.969707299 0.864287763 1 18.96806117 -4.851985208 2.629929774 0.960658408 0.644899465 0.67420687 0.06011453 0.234972787 2.419653367 0.015714906 0.155126424 1.41E-05 4.851985208 -0.315758943 AGEPDGES(ph)LDEQPSSSSSKR ddPTM_A459_MK2206_30min_R1 1 AGEPDGESLDEQPSSSSSKR 20 1 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 AGEPDGES(1)LDEQPSSSSSKR 65.207 0.0087953 36753000 1771.6 2265 2796.6 2535.7 2809.2 2694.1 2544 2509.6 2475.8 2015.3 TRUE FALSE 1620.916117 2117.548088 2606.774584 2731.000053 2697.303615 2846.637614 2374.294402 2487.658832 2733.16827 2264.970579 0.715645551 0.934911962 1.150908806 1.2057552 1.190877992 1.256809974 1.048267216 1.098318387 1.206712482 1 11.14527659 -4.962465143 2.204478951 1.153722735 0.680509853 0.767375697 0.075029223 0.197613803 1.489277531 0.020362424 0.160081941 1.09E-05 4.962465143 -0.473212881 AGEPNS(ph)PDAEEANS(ph)PDVTAGCDPAGVHPPR ddPTM_A459_MK2206_30min_R1 1 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 2 AGEPNS(1)PDAEEANS(0.998)PDVT(0.002)AGCDPAGVHPPR 131.65 2.95E-17 6927900 882.68 1060.3 1075.8 793.34 1060.8 909.73 954.85 799.53 796.27 829.37 TRUE FALSE 807.6034309 991.2742773 1002.777693 854.4431843 1018.54609 961.2381264 891.1536987 792.5397935 879.045116 932.118617 0.866417016 1.063463661 1.075804812 0.916667867 1.092721539 1.031240133 0.956051818 0.850256372 0.94306143 1 9.864369747 -7.465861896 5.244366187 0.918839248 1.012274259 0.173315473 0.074732299 0.297004059 17.36635224 0.031954089 0.020689706 3.42E-08 7.465861896 0.09343501 AGEPNS(ph)PDAEEANS(ph)PDVTAGCDPAGVHPPR ddPTM_A459_MK2206_30min_R2 5 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 2 AGEPNS(1)PDAEEANS(0.995)PDVT(0.005)AGCDPAGVHPPR;AGEPNS(0.991)PDAEEANS(0.998)PDVT(0.011)AGCDPAGVHPPR;AGEPNS(1)PDAEEANS(1)PDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANS(1)PDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANS(1)PDVTAGCDPAGVHPPR 142.56 7.04E-18 290410000 149622.5 166955.1 151259.1 178525.6 171478 160293.8 166663.7 140257.2 146724 161670.2 TRUE FALSE 161077.7136 158664.3525 156302.0029 163939.4874 164744.9121 166393.8929 144780.556 158589.2976 159485.7883 156394.9146 1.029942144 1.014510944 0.999405916 1.048240525 1.053390467 1.063934165 0.92573698 1.014031038 1.019763262 1 17.25483408 -10.63554884 7.599575404 0.999999997 1.018415187 0.023202096 0.036475406 2.17E-09 2.17E-10 0.036900232 0.008949619 2.31E-11 10.63554884 0.01841519 AGEPNS(ph)PDAEEANSPDVTAGCDPAGVHPPR ddPTM_A459_MK2206_30min_R1 4 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 AGEPNS(0.988)PDAEEANS(0.012)PDVTAGCDPAGVHPPR;AGEPNS(0.889)PDAEEANS(0.111)PDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR 202.03 9.68E-48 437995700 6626.53 7012.41 7199 6896.81 7525.2 6446.78 6933.45 6623.81 5854.07 6206.11 TRUE FALSE 6062.908826 6555.900834 6710.351938 7428.003501 7225.455349 6811.791112 6470.932201 6565.898728 6462.621525 6974.969761 0.869238009 0.939918173 0.962061796 1.064951356 1.035912068 0.97660511 0.927736237 0.941351569 0.926544737 1 12.76797125 -4.853659787 2.141468587 0.98020931 0.850112904 0.388531059 0.042550656 0.678186663 4.065868309 0.013092422 0.162930207 1.40E-05 4.853659787 -0.130096407 AGEPNS(ph)PDAEEANSPDVTAGCDPAGVHPPR ddPTM_A459_MK2206_30min_R2 4 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 AGEPNS(0.993)PDAEEANS(0.007)PDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR 146.8 1.06E-19 746324000 513580.5 685988 564452 710769.6 718167 682614.8 734214 474531 735880 703776 TRUE FALSE 552900.618 651922.8334 583270.548 652697.45 689968.1551 708592.1845 637810.8199 536553.831 799885.5122 680811.8468 0.812119561 0.957566818 0.856727965 0.958704601 1.013449103 1.040804721 0.936838604 0.788108834 1.17489952 1 19.37689662 -3.080966574 0.523138006 0.982983851 9.26E-11 0.218222194 0.096624122 39.78794834 2.006202293 0.051254682 35.17626251 0.000829915 3.080966574 -0.982983851 AGEPNSPDAEEANS(ph)PDVTAGCDPAGVHPPR ddPTM_A459_MK2206_30min_R1 2 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 AGEPNSPDAEEANS(0.999)PDVT(0.001)AGCDPAGVHPPR;AGEPNS(0.461)PDAEEANS(0.537)PDVT(0.002)AGCDPAGVHPPR 151.28 4.93E-20 78541000 2061.81 1990.02 2163 1770.47 2406.3 1833.4 1987.4 1849.92 1440.77 1649.59 TRUE FALSE 1886.442233 1860.469336 2016.181586 1906.831906 2310.451976 1937.205524 1854.824172 1833.746344 1590.543197 1853.953663 1.017523938 1.003514475 1.087503764 1.02852188 1.246229624 1.044905039 1.000469542 0.989100419 0.857919607 1 10.85638947 -7.586472327 1.980461406 0.93587899 1.074115134 0.372866928 0.072641224 0.371010436 2.879488619 0.047246014 0.022773776 2.59E-08 7.586472327 0.138236143 AGEPNSPDAEEANS(ph)PDVTAGCDPAGVHPPR ddPTM_A459_MK2206_30min_R2 2 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 AGEPNSPDAEEANS(0.998)PDVT(0.002)AGCDPAGVHPPR;AGEPNS(0.001)PDAEEANS(0.959)PDVT(0.04)AGCDPAGVHPPR 111.09 2.40E-11 106077000 17455 21825 18848.4 22648.9 19974.7 18844.3 19647 14847.4 22496 24365 TRUE FALSE 18791.36822 20741.20224 19476.79625 20798.41242 19190.39291 19561.43304 17067.3253 16788.00616 24452.66142 23569.97205 0.797258825 0.879984168 0.826339387 0.882411417 0.814188191 0.829930261 0.72411309 0.712262455 1.037449742 1 14.52466243 -8.275833165 24.92725797 1.01872493 0.811880997 0.711410295 0.05356757 513.4130278 889123.0811 0.055388358 0.014563869 5.30E-09 8.275833165 -0.206843933 AGEQQLS(ph)EPEDMEMEAGDTDDPPR ddPTM_A459_MK2206_30min_R1 1 AGEQQLSEPEDMEMEAGDTDDPPR 24 0 Q93009;H3BMF6 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 1 AGEQQLS(1)EPEDMEMEAGDTDDPPR 93.6 0.00071753 0 1131.7 1216.6 1102.4 1080 1413.3 1174.5 1263.7 1072.6 864.4 847.96 TRUE FALSE 1035.442972 1137.399119 1027.572159 1163.181787 1357.005268 1240.999175 1179.400879 1063.222371 954.2574733 953.0116866 1.086495566 1.193478669 1.078236683 1.220532553 1.423912516 1.302186733 1.237551328 1.115644631 1.00130721 1 9.896350095 -8.028002077 2.745329198 1.000774542 1.22463255 0.46784397 0.093748112 0.281741838 4.024220314 0.082841591 0.028674776 9.38E-09 8.028002077 0.223858007 AGEQQLS(ph)EPEDMEMEAGDTDDPPR ddPTM_A459_MK2206_30min_R2 2 AGEQQLSEPEDMEMEAGDTDDPPR 24 0 Q93009;H3BMF6 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 1 AGEQQLS(1)EPEDMEMEAGDTDDPPR;AGEQQLS(1)EPEDMEMEAGDTDDPPR 121.09 9.89E-08 11483500 53683 63684 60317 73364 73334 62314 66358 55903 66240 72005 TRUE FALSE 57793.01176 60521.54517 62327.93868 67369.92652 70454.53869 64685.40294 57645.11489 63209.71404 72001.43547 69655.48275 0.829697957 0.868869797 0.894803054 0.967187705 1.011471544 0.928647687 0.827574695 0.907462149 1.033679369 1 16.08794929 -5.385028795 2.264118736 0.945455183 0.842495317 0.352643725 0.056672247 0.418409429 4.075495794 0.017272205 0.050261223 4.12E-06 5.385028795 -0.102959866 AGETRFT(ph)DTR ddPTM_A459_MK2206_30min_R1 1 AGETRFTDTR 10 1 P13639 P13639 EEF2 Elongation factor 2 1 AGET(0.012)RFT(0.988)DT(0.001)R 130.1 0.029397 144150000 10897 6280.1 9735 9330.1 10360 3626.9 3718.4 7453.1 2765.9 1569.3 TRUE FALSE 9970.152928 5871.264349 9074.215323 10048.70592 9947.339262 3832.251944 3470.352321 7387.938332 3053.425203 1763.716732 5.652921894 3.328915717 5.144939185 5.697460221 5.6399869 2.172827345 1.967635878 4.188846315 1.731244677 1 10.78440315 -6.76655688 24.99892771 2.396133638 5.031332705 0.673853892 0.997509624 84.82834664 414382.6141 0.349261221 0.317328708 1.71E-07 6.76655688 2.635199067 AGFAGDDAPR ddPTM_A459_MK2206_30min_R1 4 AGFAGDDAPR 10 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;A5A3E0;P63267-2;F8WCH0;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;P0CG38;P0CG39 P60709;P63261;P68133;P0CG38 ACTB;POTEE;POTEF;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;POTEI;POTEJ "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member I;POTE ankyrin domain family member J" 0 ;;; 167.23 0.0041864 701505000 28367.5 26720.8 27015.7 24529.4 28234.5 26943.1 27845.9 25941.7 22591.3 20738.8 FALSE TRUE 25954.69516 24981.27106 25181.94955 26418.65864 27109.86008 28468.59504 25988.35082 25714.89445 24939.74648 23308.07911 1.113549299 1.071785922 1.080395747 1.133454993 1.163110008 1.2214046 1.114993247 1.103260991 1.070004369 1 14.50854249 -10.99505275 6.916812459 0.99997303 1.120714207 0.400486544 0.043678381 2.04E-05 1.55E-06 0.047425948 0.011499915 1.01E-11 10.99505275 0.120741177 AGFAGDDAPR ddPTM_A459_MK2206_30min_R2 4 AGFAGDDAPR 10 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;A5A3E0;P63267-2;F8WCH0;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;P0CG38;P0CG39 P60709;P63261;P68133;P0CG38 ACTB;POTEE;POTEF;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;POTEI;POTEJ "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member I;POTE ankyrin domain family member J" 0 ;;; 154.49 0.0076924 1026552000 930350 1091180 971290 1030940 1050540 1008940 1148780 822970 883270 912280 FALSE TRUE 1001578.311 1036993.588 1003672.324 946708.9042 1009290.521 1047335.919 997943.8061 930535.0047 960095.228 882512.3783 1.134917012 1.175047074 1.137289797 1.072742918 1.143655937 1.186766265 1.13079865 1.054415811 1.087911344 1 19.75125699 -8.278529033 1.008907154 1.006863215 1.141460417 0.621690101 0.03372533 0.34994978 0.740170043 0.033815358 0.01163447 5.27E-09 8.278529033 0.134597203 AGFSPDS(ph)SKADSDAASSGGSDSK ddPTM_A459_MK2206_30min_R1 1 AGFSPDSSKADSDAASSGGSDSK 23 1 O95402;B8ZZF3 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 1 AGFS(0.004)PDS(0.729)S(0.267)KADSDAASSGGSDSK 82.034 0.0002501 5328500 1166.8 1238.7 1155.4 1054.3 1085.2 1063.8 1032.3 1316.4 936.55 960.56 TRUE FALSE 1067.557533 1158.060405 1076.974667 1135.502369 1041.974186 1124.031437 963.4371505 1304.890854 1033.907724 1079.561425 0.98888077 1.072713769 0.997603881 1.051818213 0.965182862 1.041192665 0.892433843 1.20872312 0.957710882 1 10.07622962 AGFSPDS(ph)SKADSDAASSGGSDSK ddPTM_A459_MK2206_30min_R2 1 AGFSPDSSKADSDAASSGGSDSK 23 1 O95402;B8ZZF3 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 1 AGFS(0.002)PDS(0.318)S(0.318)KADS(0.263)DAAS(0.062)S(0.026)GGS(0.011)DS(0.001)K 53.278 0.014184 6155000 9284.7 14039 16619 13093 13727 7469.4 14918 10915 13699 13733 TRUE FALSE 9995.543771 13341.84367 17173.06917 12023.26002 13188.00901 7753.653251 12959.24868 12341.62798 14890.51426 13284.89333 0.752399249 1.00428685 1.292676481 0.905032484 0.992707181 0.583644374 0.975487597 0.928997145 1.120860656 1 13.69749902 -4.756086686 24.42138826 0.971550743 0.75239878 0.137856441 0.168661244 289.7754783 1321890.819 0.043980403 0.36336087 1.75E-05 4.756086686 -0.219151963 AGGAS(ph)PAASSTAQPPTQHR ddPTM_A459_MK2206_30min_R1 7 AGGASPAASSTAQPPTQHR 19 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR 244.18 2.12E-79 529706000 9976.14 9025.55 10044.24 8454.55 9921.87 8490.31 10789.17 9320.16 7164.51 7275.51 TRUE FALSE 9127.616906 8437.985055 9362.464974 9105.720906 9526.660908 8971.024015 10069.44416 9238.674824 7909.286453 8176.855106 1.116274752 1.031935254 1.144995827 1.11359695 1.1650764 1.097124004 1.231456841 1.129856736 0.967277315 1 12.99733036 -8.25760482 24.49309534 0.983638644 1.129171191 0.589961709 0.048403038 164.2687007 1049282.679 0.036887868 0.012719417 5.53E-09 8.25760482 0.145532547 AGGAS(ph)PAASSTAQPPTQHR ddPTM_A459_MK2206_30min_R2 7 AGGASPAASSTAQPPTQHR 19 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 AGGAS(1)PAASSTAQPPTQHR;AGGAS(0.959)PAAS(0.008)S(0.015)T(0.015)AQPPT(0.002)QHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(0.999)PAAS(0.001)STAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR 210.39 1.49E-16 583124100 61247.43 88217.56 72728.93 87494.7 82140.8 90365.36 83999.75 64136.83 65225.11 80946.78 TRUE FALSE 65936.58033 83836.80425 75153.67623 80346.10313 78915.53947 93804.2771 72970.48192 72519.7339 70898.27217 78305.4932 0.842042846 1.070637587 0.959749733 1.026059601 1.007790594 1.19792716 0.931869259 0.926112983 0.905406112 1 16.2568259 AGGDLSLS(ph)PGR ddPTM_A459_MK2206_30min_R2 2 AGGDLSLSPGR 11 0 A0A1B0GVM0;A0A1B0GTT1;Q9BUH8 A0A1B0GVM0 BEGAIN Brain-enriched guanylate kinase-associated protein 1 AGGDLS(0.056)LS(0.944)PGR;AGGDLS(0.004)LS(0.996)PGR 107.03 0.0095172 0 28941 43300 35922 32632 41096 36455 37617 35052 34088 34748 TRUE FALSE 31156.74521 41149.78496 37119.62155 29965.86122 39482.36455 37842.32057 32677.84271 39633.41675 37052.91262 33614.17561 0.926893034 1.224179508 1.104284751 0.891465005 1.174574829 1.12578458 0.972144702 1.179068534 1.102300204 1 15.03678215 AGGEEEDDDDEAAGGR ddPTM_A459_MK2206_30min_R1 2 AGGEEEDDDDEAAGGR 16 0 Q6DD87 Q6DD87 ZNF787 Zinc finger protein 787 0 ; 340.88 2.02E-152 3490000 1202.07 1104.22 1144.5 1040.48 884.01 1043.56 1281.42 921.82 1096.89 1307.67 FALSE TRUE 1099.827634 1032.335077 1066.814529 1120.61795 848.7980098 1102.645465 1195.93881 913.7606249 1210.915641 1469.674032 0.748348008 0.702424521 0.725885132 0.762494217 0.57754168 0.750265325 0.813744262 0.621743737 0.823934842 1 10.52128049 -8.555454446 6.366998925 0.999983899 0.714920377 0.651334748 0.064994392 0.159864241 28.16521044 0.061151979 0.01583739 2.78E-09 8.555454446 -0.285063521 AGGGATPVSS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 AGGGATPVSSPSR 13 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 AGGGATPVS(0.135)S(0.852)PS(0.014)R;AGGGATPVS(0.017)S(0.973)PS(0.01)R 177.83 0.00010507 6735400 41880 51948 41885 54516 55301 61811 56483 45587 60635 63606 TRUE FALSE 45086.365 49368.33786 43281.42499 50061.86841 53129.60487 64163.26092 49066.71425 51545.37742 65908.9227 61530.54143 0.732747737 0.802338753 0.703413687 0.813610075 0.863467209 1.042787198 0.797436738 0.837720199 1.071157854 1 15.90901507 -6.122961913 0.319212478 1.00691222 0.647590558 0.519074859 0.084307192 2.837587951 0.446958402 0.106014776 0.373474894 7.53E-07 6.122961913 -0.359321662 AGGGDLLLPPS(ph)PK ddPTM_A459_MK2206_30min_R2 2 AGGGDLLLPPSPK 13 0 Q5TH69 Q5TH69 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 1 AGGGDLLLPPS(1)PK;AGGGDLLLPPS(1)PK 146.59 0.00059626 9756100 116655 111462 117070 97898 94537 76571 122954 97985 93321 111087 TRUE FALSE 125586.1965 105926.9592 120973.0554 89899.42024 90825.00237 79484.96306 106809.9921 110791.9759 101437.8919 107462.2403 1.168654182 0.985713297 1.125726162 0.836567524 0.845180615 0.739654811 0.993930443 1.030985169 0.943939859 1 16.71347029 -5.755869851 24.99999543 0.907521926 1.082599447 0.434391943 0.093989732 142.8921773 641392.3801 0.027666801 0.046250708 1.75E-06 5.755869851 0.175077521 AGGGGGLGAGS(ph)PALSGGQGR ddPTM_A459_MK2206_30min_R1 4 AGGGGGLGAGSPALSGGQGR 20 0 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(0.94)PALS(0.06)GGQGR;AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(0.997)PALS(0.003)GGQGR 253.34 2.80E-38 107980800 9803.9 9620.4 8597.8 7750.96 10658.5 10490.4 12213.6 10028.7 10568.3 9350.2 TRUE FALSE 8970.026823 8994.110211 8014.205291 8347.940282 10233.94938 11084.35738 11398.85303 9941.020133 11666.9126 10508.57337 0.853591302 0.855883087 0.762634947 0.794393301 0.973866672 1.054791835 1.084719365 0.94599141 1.11022802 1 13.3592792 -6.398095234 3.574702073 1.037176931 0.815696069 0.818951808 0.0494297 0.100544061 2.331870413 0.016057874 0.018281517 4.00E-07 6.398095234 -0.221480862 AGGGGGLGAGS(ph)PALSGGQGR ddPTM_A459_MK2206_30min_R2 3 AGGGGGLGAGSPALSGGQGR 20 0 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(0.999)PALS(0.001)GGQGR;AGGGGGLGAGS(1)PALSGGQGR 250.38 5.50E-38 126638000 140526 136782 141329 149065 152677 172668 180852 110589 170436 163943 TRUE FALSE 151284.7786 129989.6048 146040.8383 136885.9127 146682.1338 179239.0017 157105.9152 125043.362 185260.2152 158593.5533 0.953915058 0.819639904 0.920849778 0.863124066 0.924893419 1.130178358 0.990619807 0.788451733 1.168144677 1 17.2749746 -6.535874577 24.96722872 1.00368485 0.887568331 0.262538088 0.100139176 341.0583535 655227.25 0.032465044 0.032482174 2.91E-07 6.535874577 -0.116116519 AGGIETIANEFSDR ddPTM_A459_MK2206_30min_R2 1 AGGIETIANEFSDR 14 0 Q92598-2;Q92598;Q92598-3;R4GN69 Q92598-2 HSPH1 Heat shock protein 105 kDa 0 134.18 0.0092188 3651700 11193 11007 11536 12666 10022 12882 14288 11948 11015 10766 FALSE TRUE 12049.94469 10460.40839 11920.60448 11631.14728 9628.485923 13372.23354 12411.96844 13509.64462 11973.06479 10414.7063 1.157012434 1.004388226 1.144593437 1.116800315 0.924508637 1.283976057 1.191773256 1.297170005 1.149630575 1 13.34633454 -6.781331948 24.99999187 1.203537037 1.072649435 0.236972405 0.100278072 305.8851543 384418.7868 0.033473498 0.029558692 1.65E-07 6.781331948 -0.130887602 AGGIETIANEYSDR ddPTM_A459_MK2206_30min_R1 1 AGGIETIANEYSDR 14 0 A0A087WYC1;P34932;A0A087WTS8;P34932-2 A0A087WYC1 HSPA4 Heat shock 70 kDa protein 4 0 149.94 0.001944 0 1453.6 1283.4 1165.3 929.39 1396.4 1031.5 1184.7 1162.3 1137 1243.4 FALSE TRUE 1329.963687 1199.850427 1086.202683 1000.971779 1340.778431 1089.902639 1105.670825 1152.138134 1255.195219 1397.441779 0.951713128 0.858604948 0.777279382 0.716288717 0.959452087 0.779927046 0.791210654 0.82446235 0.898209312 1 10.44857246 -8.572252733 2.691398268 0.999622779 0.828782933 0.338739482 0.072314679 0.352753934 6.255257826 0.070300209 0.018912261 2.68E-09 8.572252733 -0.170839847 AGGKPSQS(ph)PSQEAAGEAVLGAK ddPTM_A459_MK2206_30min_R2 1 AGGKPSQSPSQEAAGEAVLGAK 22 1 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 AGGKPS(0.165)QS(0.764)PS(0.071)QEAAGEAVLGAK 70.538 0.0022172 4637000 24371 28942 22352 23266 24606 17618 23150 19898 22252 24111 TRUE FALSE 26236.8625 27504.78237 23097.20452 21365.09338 23639.8448 18288.46534 20110.37719 22498.73692 24187.43874 23324.26004 1.124874377 1.179234939 0.990265264 0.916003052 1.013530322 0.784096271 0.862208583 0.964606675 1.037007763 1 14.50954369 -5.39062415 3.599814091 0.932332741 1.152366835 0.569477367 0.072364019 0.168107608 3.885165003 0.020519143 0.047259177 4.07E-06 5.39062415 0.220034095 AGGLDWPEATEVS(ph)PSR ddPTM_A459_MK2206_30min_R1 5 AGGLDWPEATEVSPSR 16 0 Q9Y446;Q9Y446-2;E9PKC4;E9PK71;E9PJR7;E9PRW6 Q9Y446 PKP3 Plakophilin-3 1 AGGLDWPEATEVS(0.892)PS(0.108)R;AGGLDWPEAT(0.011)EVS(0.98)PS(0.01)R;AGGLDWPEATEVS(1)PSR;AGGLDWPEATEVS(0.996)PS(0.004)R;AGGLDWPEATEVS(0.96)PS(0.039)R 303.44 2.72E-88 224285000 13399.8 13205.2 13545 11396.4 13480.9 11780.4 13605.5 12332.4 11137.2 10648.7 TRUE FALSE 12260.07664 12345.53908 12625.60314 12274.1527 12943.92721 12447.39607 12697.90192 12224.57913 12294.95179 11967.94135 1.02440982 1.031550767 1.054951956 1.025585967 1.08155002 1.040061587 1.060992994 1.02144377 1.027323868 1 13.54688739 -8.393280494 1.389138925 1.001775394 1.045349455 0.378032124 0.017483614 0.418260779 1.702840082 0.016339786 0.004981394 4.04E-09 8.393280494 0.043574061 AGGLDWPEATEVS(ph)PSR ddPTM_A459_MK2206_30min_R2 3 AGGLDWPEATEVSPSR 16 0 Q9Y446;Q9Y446-2;E9PKC4;E9PK71;E9PJR7;E9PRW6 Q9Y446 PKP3 Plakophilin-3 1 AGGLDWPEAT(0.001)EVS(0.982)PS(0.018)R;AGGLDWPEAT(0.064)EVS(0.931)PS(0.005)R;AGGLDWPEAT(0.028)EVS(0.959)PS(0.014)R 135.61 0.00041196 76999000 84155 100737 100711 117593 99350 120818 113193 91579 98534 97530 TRUE FALSE 90597.9715 95734.54707 104068.6545 107985.2757 95449.01981 125415.8137 98330.62313 103548.6897 107104.3092 94347.60409 0.960257257 1.014700352 1.103034417 1.14454709 1.011674019 1.329295162 1.04221643 1.097523257 1.135209635 1 16.52569826 -5.121506909 2.348608521 1.116108002 0.960422293 0.23950098 0.087706888 0.457292087 4.483937223 0.022868606 0.10650494 7.56E-06 5.121506909 -0.155685709 AGGPATPLS(ph)PTR ddPTM_A459_MK2206_30min_R1 2 AGGPATPLSPTR 12 0 Q03252 Q03252 LMNB2 Lamin-B2 1 AGGPATPLS(0.68)PT(0.319)R;AGGPAT(0.002)PLS(0.667)PT(0.331)R 96.067 0.01746 132773000 3670.6 3694.7 3724.6 3107.4 3635.6 3672.1 3795.4 3571.1 3107.5 3060.5 TRUE FALSE 3358.396195 3454.174358 3471.784529 3346.732486 3490.786353 3880.011129 3542.215791 3539.878249 3430.535745 3439.657846 0.976375077 1.004220336 1.009340081 0.972984127 1.014864417 1.128022409 1.029816322 1.029136736 0.997347963 1 11.74804935 -6.526696185 24.99986686 1.041933893 0.993135481 0.267521879 0.035412771 147.9570651 968935.6896 0.011914212 0.011964039 2.97E-07 6.526696185 -0.048798412 AGGPATPLS(ph)PTR ddPTM_A459_MK2206_30min_R2 3 AGGPATPLSPTR 12 0 Q03252 Q03252 LMNB2 Lamin-B2 1 AGGPATPLS(0.982)PT(0.018)R;AGGPATPLS(0.687)PT(0.313)R;AGGPATPLS(0.908)PT(0.091)R 118.76 0.0044433 186003000 212116 237828 187044 199315 221797 199846 195448 123631 214444 228582 TRUE FALSE 228355.764 226017.8074 193279.9536 183030.3269 213088.1353 207451.2796 169785.4428 139789.9962 233095.9515 221123.3881 1.032707422 1.022134336 0.874081911 0.827729389 0.963661679 0.938169777 0.767831229 0.632180962 1.054144266 1 17.7544921 -5.259920209 5.383122583 0.867517816 1.029669936 0.193738062 0.115556476 0.236843072 25.0415021 0.030422338 0.074432127 5.50E-06 5.259920209 0.162152119 AGGPS(ph)DDDNADKPK ddPTM_A459_MK2206_30min_R1 2 AGGPSDDDNADKPK 14 1 E7EVA0 E7EVA0 MAP4 Microtubule-associated protein 1 AGGPS(1)DDDNADKPK;AGGPS(1)DDDNADKPK 97.904 0.005922 32189000 12621.9 16366.5 15926.9 15831.6 9866.9 9923.4 11535.9 12840.3 8787.9 11455.3 TRUE FALSE 11548.34112 15301.03788 14845.8264 17050.95258 9473.880479 10485.25433 10766.36116 12728.03861 9701.433653 12874.46905 0.896995525 1.188479138 1.153121449 1.324400448 0.735865723 0.814422272 0.836256712 0.988626293 0.753540485 1 13.65222532 -6.269141058 24.95052066 0.851271985 1.145042164 0.549026615 0.126920552 427.8339843 1386017.462 0.038719783 0.044733443 5.38E-07 6.269141058 0.293770179 AGGPS(ph)DDDNADKPK ddPTM_A459_MK2206_30min_R2 4 AGGPSDDDNADKPK 14 1 E7EVA0 E7EVA0 MAP4 Microtubule-associated protein 1 AGGPS(1)DDDNADKPK;AGGPS(1)DDDNADKPK;AGGPS(1)DDDNADKPK;AGGPS(1)DDDNADKPK 222.57 2.27E-08 44360600 181392 176687 178524 148732 166671 90553 201148 159754 120541 205174 TRUE FALSE 195279.511 167912.9805 184475.9011 136580.1198 160126.6591 93999.05787 174737.026 180634.3963 131025.4383 198479.1892 0.983879024 0.845997916 0.929447071 0.688133201 0.806768003 0.473596543 0.880379584 0.910092373 0.660146985 1 17.59862822 -5.746942836 24.90665631 0.763674439 0.912397054 0.176684847 0.142528584 393.2269117 675601.2902 0.038221919 0.065822297 1.79E-06 5.746942836 0.148722615 AGGPT(ph)TPLSPTR ddPTM_A459_MK2206_30min_R2 1 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 1 AGGPT(0.688)T(0.312)PLSPTR 103.46 0.024961 36825000 56118 62307 48593 51996 53867 59796 51523 37674 47189 54407 TRUE FALSE 60414.43723 59212.92498 50213.06637 47747.76047 51751.91092 62071.57868 44757.96821 42598.12115 51293.41392 52631.70405 1.147871579 1.125042901 0.954045993 0.907205293 0.98328397 1.179357192 0.850399375 0.809362378 0.974572548 1 15.68364448 -5.244996959 5.234750241 0.953321909 1.140066042 0.368106665 0.093910724 0.194816818 17.28944044 0.02622865 0.067137361 5.69E-06 5.244996959 0.186744133 AGGPTT(ph)PLSPTR ddPTM_A459_MK2206_30min_R1 1 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 1 AGGPT(0.03)T(0.97)PLSPTR 140.45 0.0025106 33408000 5090.2 5565.5 5409.7 4049 6031.5 4698.6 5162.4 4716.2 4120.3 4024.9 TRUE FALSE 4657.25176 5203.184938 5042.504636 4360.854682 5791.252583 4964.630672 4818.025715 4674.966761 4548.61993 4523.534998 1.029560236 1.150247525 1.114726566 0.964036905 1.280249315 1.097511277 1.065101899 1.033476421 1.005545427 1 12.14323492 -7.658932886 2.07455067 1.007898605 1.108915263 0.231232771 0.076695156 0.50380492 4.305438319 0.049671147 0.022705907 2.19E-08 7.658932886 0.101016658 AGGPTT(ph)PLSPTR ddPTM_A459_MK2206_30min_R2 1 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 1 AGGPT(0.259)T(0.741)PLSPTR 102.97 0.026015 36162000 85328 116220 87901 111900 94715 99121 112080 93680 89865 93304 TRUE FALSE 91860.77729 110448.6838 90831.57547 102757.412 90996.0132 102893.1191 97363.76137 105924.2977 97681.29526 90259.49812 1.017740838 1.223679348 1.00633814 1.138466468 1.008159973 1.139969989 1.078709315 1.173552921 1.082227326 1 16.46179114 -12.41229866 13.70516073 0.391104173 1.09376369 0 0.075683425 0 0 0 0.015707484 3.87E-13 12.41229866 0.702659517 AGGPTTPLS(ph)PTR ddPTM_A459_MK2206_30min_R1 4 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 1 AGGPT(0.001)T(0.025)PLS(0.586)PT(0.389)R;AGGPTTPLS(0.952)PT(0.048)R;AGGPT(0.004)T(0.078)PLS(0.913)PT(0.005)R;AGGPTTPLS(1)PTR 148.89 0.00059074 334291000 10530.2 10226.4 8856.5 7856 9568.6 8430.1 9259.8 8461.5 7089.5 7493.2 TRUE FALSE 9634.551194 9560.659501 8255.345456 8461.070481 9187.4624 8907.404977 8642.095637 8387.521998 7826.478895 8421.514187 1.14404025 1.135266092 0.980268545 1.004697053 1.090951365 1.057696369 1.026192612 0.995963649 0.929343432 1 13.03986394 -1.522878745 0.457949739 1.0018085 4.707625156 0.511635876 0.046075924 83.17380944 0.9838771 0.030790324 289.647831 0.03 1.522878745 3.705816656 AGGPTTPLS(ph)PTR ddPTM_A459_MK2206_30min_R2 3 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 1 AGGPTTPLS(0.983)PT(0.017)R;AGGPTTPLS(0.597)PT(0.403)R;AGGPTTPLS(0.5)PT(0.5)R 166.62 0.00046273 283143000 122381 127164 116598 141997 132276 135407 148875 117378 125359 130037 TRUE FALSE 131750.5835 120849.2207 120485.3191 130395.3909 127082.1796 140560.0083 129327.5337 132719.7076 136262.4992 125793.9033 1.047352693 0.960692191 0.957799352 1.036579575 1.010241166 1.117383311 1.028090633 1.055056756 1.083220217 1 16.94070248 -6.186590493 2.020284843 1.056706952 0.988241073 0.297963096 0.039963948 0.360840797 2.894941741 0.013015422 0.017879508 6.51E-07 6.186590493 -0.068465879 AGGS(ph)PASYHGSTSPR ddPTM_A459_MK2206_30min_R1 3 AGGSPASYHGSTSPR 15 0 I3L2B2;O95208-3;O95208-2;F6PQP6 I3L2B2 EPN2 Epsin-2 1 AGGS(0.966)PAS(0.006)YHGS(0.021)T(0.007)SPR;AGGS(0.999)PAS(0.001)YHGSTSPR;AGGS(0.999)PAS(0.001)YHGSTSPR 111.81 0.0031633 8339600 3285.31 1671.5 1710.84 1291.78 4024.05 3659.77 3411.26 2454.69 1569.1 1893.12 TRUE FALSE 3005.877133 1562.685046 1594.712947 1391.273119 3863.763567 3866.983015 3183.70107 2433.228904 1732.21356 2127.653998 1.412765955 0.734463897 0.74951705 0.65390008 1.815973636 1.81748678 1.496343425 1.143620582 0.814142507 1 11.05504784 -6.24592795 24.93422875 1.3860076 0.866851561 0.278106547 0.359536792 1031.542163 1658177.349 0.113802426 0.146377019 5.68E-07 6.24592795 -0.51915604 AGGS(ph)PASYHGSTSPR ddPTM_A459_MK2206_30min_R2 2 AGGSPASYHGSTSPR 15 0 I3L2B2;O95208-3;O95208-2;F6PQP6 I3L2B2 EPN2 Epsin-2 1 AGGS(1)PASYHGSTSPR;AGGS(1)PASYHGSTSPR 106.87 0.0028971 35913000 4308.9 18899 13690.8 53198 42477 84279 39017 23057 64131 14046.5 TRUE FALSE 4638.792697 17960.50314 14147.24444 48851.55323 40809.13955 87486.2964 33894.02103 26070.62907 69708.99846 13588.16386 0.341384807 1.321775579 1.041144675 3.595154853 3.0032858 6.438419299 2.494378298 1.918627811 5.130126425 1 13.7300629 -5.753364849 9.413893088 3.483909545 0.939614804 0.367889829 1.476330055 0.155321125 130.1974498 0.400599412 0.658365053 1.76E-06 5.753364849 -2.544294742 AGGSAALS(ph)PSK ddPTM_A459_MK2206_30min_R1 4 AGGSAALSPSK 11 0 Q92522 Q92522 H1FX Histone H1x 1 AGGSAALS(0.998)PS(0.002)K;AGGSAALS(1)PSK;AGGSAALS(0.997)PS(0.003)K;AGGSAALS(1)PSK 164.48 0.00054161 1671680000 32028.9 35037.8 34447.5 29526.6 28467.2 26159.3 29056.1 31285.2 26761.9 25212.8 TRUE FALSE 29304.67386 32756.83285 32109.29968 31800.74385 27333.29114 27640.41696 27117.82058 31011.67679 29543.89527 28336.35201 1.034172425 1.15600035 1.133148673 1.122259627 0.964601623 0.975440203 0.95699759 1.094413169 1.042614634 1 14.79036642 -6.249500461 24.59338027 1.006452631 1.116135171 0.538801274 0.04783258 498.5647578 1027009.889 0.015036064 0.019257998 5.63E-07 6.249500461 0.10968254 AGGSAALS(ph)PSK ddPTM_A459_MK2206_30min_R2 5 AGGSAALSPSK 11 0 Q92522 Q92522 H1FX Histone H1x 1 AGGSAALS(0.955)PS(0.045)K;AGGSAALS(0.98)PS(0.02)K;AGGSAALS(0.999)PS(0.001)K;AGGSAALS(0.987)PS(0.013)K;AGGSAALS(0.98)PS(0.02)K 157.03 0.0005397 1513367000 1912132 2057630 1959290 1855882 2004133 1477107 2321300 1851695 1710719 2056832 TRUE FALSE 2058526.296 1955451.086 2024611.751 1704250.504 1925440.668 1533319.342 2016510.522 2093717.894 1859514.246 1989717.74 1.034582069 0.982778133 1.017537166 0.856528778 0.967695382 0.770621536 1.013465619 1.052268798 0.934561827 1 20.92413236 -10.38194682 11.41119114 1.000012614 0.957382745 0.021570689 0.082492596 0 0 0.081951172 0.019876079 4.15E-11 10.38194682 -0.042629869 AGGSAALS(ph)PSKK ddPTM_A459_MK2206_30min_R1 2 AGGSAALSPSKK 12 1 Q92522 Q92522 H1FX Histone H1x 1 AGGS(0.326)AALS(0.647)PS(0.028)KK;AGGSAALS(0.975)PS(0.025)KK 112.42 0.011463 303780000 4112.5 4214.7 4599 3661.7 3240.7 2852 2995.3 3628.8 2022.26 3005.1 TRUE FALSE 3762.710279 3940.322264 4286.832694 3943.724768 3111.616057 3013.477775 2795.489002 3597.073784 2232.481164 3377.394475 1.114086704 1.166675167 1.269272134 1.167682602 0.92130667 0.892249276 0.827705802 1.065044019 0.661006933 1 11.72169498 -6.272718959 4.176689227 0.891417891 1.187940624 0.636646122 0.105674415 0.130338516 5.575516217 0.031272412 0.037918988 5.34E-07 6.272718959 0.296522733 AGGSAALS(ph)PSKK ddPTM_A459_MK2206_30min_R2 1 AGGSAALSPSKK 12 1 Q92522 Q92522 H1FX Histone H1x 1 AGGS(0.003)AALS(0.958)PS(0.039)KK 146.96 0.0011537 90332000 271570 256590 255720 261790 265110 219010 356660 257950 213290 311310 TRUE FALSE 292361.608 243848.1137 264245.5772 240400.9196 254700.4493 227344.579 309830.1136 291664.9507 231841.5787 301151.9802 0.970810844 0.809717783 0.877449243 0.79827109 0.845753859 0.754916434 1.028816458 0.968497536 0.769849093 1 18.20013222 -7.260175201 24.99438483 0.939165562 0.840997718 0.251878528 0.083476537 169.1477946 3344299.333 0.032600756 0.023835006 5.49E-08 7.260175201 -0.098167845 AGGSAALSPS(ph)KK ddPTM_A459_MK2206_30min_R2 1 AGGSAALSPSKK 12 1 Q92522 Q92522 H1FX Histone H1x 1 AGGS(0.002)AALS(0.079)PS(0.92)KK 62.69 0.044755 372880000 2555600 2553900 2749400 2992000 2853800 2097400 3465900 3012600 2727800 3331000 TRUE FALSE 2751258.701 2427077.04 2841063.624 2747544.029 2741745.473 2177218.027 3010823.167 3406357.164 2965059.113 3222309.743 0.853815716 0.753210347 0.881685453 0.852662918 0.850863415 0.675670001 0.934368018 1.057116614 0.920165766 1 21.61966375 -7.509957448 24.37055061 0.992333205 0.81467431 0.625580838 0.064295532 281.1073122 530193.6891 0.02738658 0.017467112 3.09E-08 7.509957448 -0.177658895 AGGSPAPGPETPAIS(ph)PSKR ddPTM_A459_MK2206_30min_R1 1 AGGSPAPGPETPAISPSKR 19 1 P33316;H0YKI0 P33316 DUT "Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial" 1 AGGSPAPGPET(0.119)PAIS(0.83)PS(0.052)KR 90.592 0.001365 8255500 2178.2 2238.7 2019.7 2130.4 1938.9 1565.2 1930.6 1977.4 1804.7 1305.1 TRUE FALSE 1992.932652 2092.960223 1882.608391 2294.483777 1861.669507 1653.820271 1801.813197 1960.1118 1992.305023 1466.785641 1.3587075 1.426902585 1.283492515 1.564293863 1.269217161 1.127513268 1.22840935 1.336331462 1.358279606 1 10.51844233 -6.502007836 24.71698893 1.22850401 1.40275599 0.392155955 0.11563878 765.5738541 906654.3857 0.035519984 0.039826172 3.15E-07 6.502007836 0.17425198 AGGSPAPGPETPAIS(ph)PSKR ddPTM_A459_MK2206_30min_R2 2 AGGSPAPGPETPAISPSKR 19 1 P33316;H0YKI0 P33316 DUT "Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial" 1 AGGSPAPGPET(0.152)PAIS(0.691)PS(0.156)KR;AGGSPAPGPET(0.001)PAIS(0.969)PS(0.03)KR 149.93 1.49E-05 26546000 81197 112040 107020 110103 117150 115045 111493 85368 125384 96113 TRUE FALSE 87413.50475 106476.2565 110587.9934 101107.2327 112550.1024 119423.1181 96853.83517 96525.89071 136289.6737 92976.84068 0.940164283 1.145191165 1.189414402 1.087445346 1.210517604 1.284439407 1.041698497 1.038171334 1.465845394 1 16.50458378 -4.762916647 4.533173984 1.165022773 0.921857489 0.206782086 0.131139363 0.318456966 14.61124367 0.031433501 0.252845882 1.73E-05 4.762916647 -0.243165284 AGGSPASYHGST(ph)SPR ddPTM_A459_MK2206_30min_R1 1 AGGSPASYHGSTSPR 15 0 I3L2B2;O95208-3;O95208-2;F6PQP6 I3L2B2 EPN2 Epsin-2 1 AGGS(0.043)PAS(0.009)YHGS(0.024)T(0.462)S(0.462)PR 152.11 0.00054593 5606200 351.38 211.45 283.96 122.25 805.84 847.13 660.56 451.32 206.58 329.9 TRUE FALSE 321.4932858 197.6845666 264.6855864 131.6657162 773.7416864 895.0937685 616.4952477 447.3741568 228.0547303 370.7705026 0.867095099 0.533172313 0.713879838 0.355113784 2.086848012 2.414145036 1.662740815 1.206606657 0.615083262 1 8.534382662 -6.251536401 24.98174698 1.5619882 0.618202493 0.423449044 0.499810347 703.0795826 1773623 0.162397522 0.207100555 5.60E-07 6.251536401 -0.943785708 AGGTSSPSPVVFTVGS(ph)PPSGSTPPQGPR ddPTM_A459_MK2206_30min_R2 1 AGGTSSPSPVVFTVGSPPSGSTPPQGPR 28 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 AGGTSSPSPVVFT(0.001)VGS(0.986)PPS(0.009)GS(0.003)T(0.001)PPQGPR 107.71 6.22E-10 2271000 3962.1 4419.8 5402.1 6206.5 6977.1 6580.2 6602.1 4988.2 5589.7 9124.1 TRUE FALSE 4265.441422 4200.319159 5582.203318 5699.409096 6703.143997 6830.614122 5735.236339 5640.174867 6075.882002 8826.381364 0.483260494 0.475882356 0.63244529 0.645724319 0.759444184 0.773886131 0.649783428 0.639013276 0.688377462 1 13.10760637 -14.52287875 0.052438949 2.331286703 5.34E-18 0.728722859 0.074340794 321.0349926 1.236803777 59.05767805 12.23715636 3.00E-15 14.52287875 -2.331286703 AGHDDVPPLS(ph)PLLPPMQNNQIQR ddPTM_A459_MK2206_30min_R1 6 AGHDDVPPLSPLLPPMQNNQIQR 23 0 O14544 O14544 SOCS6 Suppressor of cytokine signaling 6 1 AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR 151.23 4.22E-08 100501000 12706.06 13694.17 12141.57 10836.55 10724.33 10329.23 9924.27 8307.61 7328 7103.54 TRUE FALSE 11625.34287 12802.67704 11317.43406 11671.18296 10297.15723 10914.06208 9262.240056 8234.977442 8089.771824 7983.580164 1.456156591 1.60362604 1.417588829 1.461898386 1.289791925 1.36706363 1.160161214 1.031489291 1.013301258 1 12.96282014 -7.153432342 0.710638385 0.96620896 1.515010961 0.914693423 0.059935866 0.181275751 0.185547994 0.048916413 0.034506538 7.02E-08 7.153432342 0.548802002 AGHDDVPPLS(ph)PLLPPMQNNQIQR ddPTM_A459_MK2206_30min_R2 5 AGHDDVPPLSPLLPPMQNNQIQR 23 0 O14544 O14544 SOCS6 Suppressor of cytokine signaling 6 1 AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR 120.54 7.01E-06 89002000 222999 254255 215314 261436 241609 231298 208437 156421 177913 183928 TRUE FALSE 240071.9749 241629.0664 222492.4613 240075.8425 232122.2167 240100.2075 181068.9715 176865.7618 193387.5511 177926.4444 1.349276526 1.358027848 1.250474386 1.349298264 1.3045965 1.349435202 1.017661945 0.994038645 1.086896059 1 17.44092142 -7.263539451 24.98382659 1.024152366 1.324805604 0.938699809 0.037830759 40.97480173 487457.8471 0.014961134 0.010652569 5.45E-08 7.263539451 0.300653238 AGIIAS(ph)AR ddPTM_A459_MK2206_30min_R2 1 AGIIASAR 8 0 P13639 P13639 EEF2 Elongation factor 2 1 AGIIAS(1)AR 83.647 0.038396 3355600 27956 23604 17949 30384 23768 24116 32533 27224 18521 25400 TRUE FALSE 30096.33285 22431.85968 18547.4107 27901.53001 22834.7489 25033.75128 28261.37802 30782.27027 20131.9231 24571.20008 1.224862146 0.912933011 0.754843501 1.135537943 0.929329818 1.018824933 1.150183057 1.252778463 0.819330071 1 14.5846807 -7.008607323 22.62320767 1.077761535 0.981199407 0.02576227 0.158268489 338.8623525 890658.7342 0.057166524 0.04792127 9.80E-08 7.008607323 -0.096562127 AGLAALS(ph)PLLR ddPTM_A459_MK2206_30min_R2 1 AGLAALSPLLR 11 0 P49189-3 P49189-3 1 AGLAALS(1)PLLR 87.713 0.035927 0 6679 10289 8979.8 11181 11066 8452.1 9391.2 7085.6 8579.9 7793.4 TRUE FALSE 7190.349375 9778.063222 9279.18205 10267.47653 10631.49324 8773.750588 8158.124159 8011.712249 9326.164193 7539.101996 0.953740827 1.296979829 1.230807337 1.361896488 1.410180316 1.163766002 1.082108209 1.062687871 1.237039132 1 12.88017697 -6.991505816 24.88091536 1.103861961 1.261222234 0.249192878 0.126397904 261.3168 765437.1086 0.045125087 0.039736136 1.02E-07 6.991505816 0.157360273 AGLAS(ph)PEEEDAVGKEPLK ddPTM_A459_MK2206_30min_R1 2 AGLASPEEEDAVGKEPLK 18 1 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 AGLAS(1)PEEEDAVGKEPLK;AGLAS(1)PEEEDAVGKEPLK 100.01 0.00159 56037000 9962.3 10673.3 10805.8 9357.1 8288 7423.9 8395.7 8708.9 9002.8 8028.2 TRUE FALSE 9114.954071 9978.46623 10072.3324 10077.78546 7957.87141 7844.234802 7835.638172 8632.759005 9938.673277 9022.794026 1.010214136 1.105917546 1.116320773 1.116925138 0.881974185 0.869379793 0.868427025 0.956772257 1.101507277 1 13.13935854 -6.254972145 24.89596703 0.936438033 1.090740799 0.475917626 0.072003412 431.6151881 1661524.583 0.022824899 0.028754456 5.56E-07 6.254972145 0.154302766 AGLAS(ph)PEEEDAVGKEPLK ddPTM_A459_MK2206_30min_R2 2 AGLASPEEEDAVGKEPLK 18 1 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 AGLAS(1)PEEEDAVGKEPLK;AGLAS(1)PEEEDAVGKEPLK 112.03 0.00069551 47247000 157343 146638 149870 158116 147544 113125 173160 125860 121947 178051 TRUE FALSE 169389.3011 139356.1702 154866.591 145197.417 141750.6812 117430.0511 150423.884 142310.3341 132553.7296 172241.2105 0.983442352 0.809075655 0.899126235 0.842988833 0.822977735 0.681776741 0.873332715 0.826226974 0.769581968 1 17.39407084 -2.66259344 1.575588534 0.826433846 132.8652938 0.216908343 0.079664274 1623.727057 6.133296944 0.020889068 773579.2802 0.002174736 2.66259344 132.0388599 AGLES(ph)GAEPGDGDSDTTK ddPTM_A459_MK2206_30min_R1 2 AGLESGAEPGDGDSDTTK 18 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLES(0.987)GAEPGDGDS(0.013)DTTK;AGLES(0.999)GAEPGDGDS(0.001)DTTK 297.73 1.78E-95 31754000 6122.3 6491.2 6559.4 5786.7 5719.5 4894.4 5313.7 5958.6 5681 4403.5 TRUE FALSE 5601.566236 6068.6217 6114.166204 6232.392637 5491.680204 5171.516698 4959.232768 5906.504588 6271.56028 4949.038825 1.131849321 1.226222286 1.235424983 1.259313749 1.109645812 1.044953754 1.002059783 1.193464993 1.267227941 1 12.27293264 -6.280653535 21.21230346 1.104626677 1.215719847 0.297625136 0.082956293 159.4498031 176030.1651 0.027366676 0.031121544 5.24E-07 6.280653535 0.11109317 AGLES(ph)GAEPGDGDSDTTKK ddPTM_A459_MK2206_30min_R2 2 AGLESGAEPGDGDSDTTKK 19 1 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLES(1)GAEPGDGDSDTTKK;AGLES(1)GAEPGDGDSDTTKK 95.591 0.00087904 16543000 56935 62419 65434 49888 73944 53101 73465 43056 42660 64294 TRUE FALSE 61293.98738 59319.36323 67615.5369 45811.99082 71040.58702 55121.79576 63818.95725 48683.56703 46370.48969 62196.09205 0.985495798 0.953747435 1.087134813 0.736573462 1.142203387 0.886258187 1.02609272 0.782743183 0.745553107 1 15.92453631 -7.764785853 24.99981906 0.823111088 0.97147826 0.191570129 0.121406083 122.5573117 915532.9283 0.058840943 0.030087167 1.72E-08 7.764785853 0.148367173 AGLESGAEPGDGDS(ph)DTTK ddPTM_A459_MK2206_30min_R1 5 AGLESGAEPGDGDSDTTK 18 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLESGAEPGDGDS(0.991)DT(0.007)T(0.002)K;AGLESGAEPGDGDS(1)DTTK;AGLESGAEPGDGDS(0.999)DTT(0.001)K;AGLESGAEPGDGDS(1)DTTK;AGLESGAEPGDGDS(0.653)DT(0.333)T(0.014)K 257.72 1.84E-42 188912000 16058.09 19883.33 19141.39 17468.19 14218.59 11849.94 15498.59 14930.18 17286.14 15094.94 TRUE FALSE 14692.26512 18588.9216 17842.12578 18813.59302 13652.23345 12520.87336 14464.70734 14799.64701 19083.09611 16965.01513 0.866033128 1.095720898 1.051701142 1.108964117 0.804728634 0.738040801 0.852619773 0.872362736 1.124849932 1 14.0502751 -6.260290506 24.98623546 0.882041447 1.036762849 0.22345832 0.117730127 143.5833252 3122710.138 0.036628652 0.044589834 5.49E-07 6.260290506 0.154721402 AGLESGAEPGDGDS(ph)DTTK ddPTM_A459_MK2206_30min_R2 6 AGLESGAEPGDGDSDTTK 18 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLES(0.01)GAEPGDGDS(0.974)DT(0.014)T(0.002)K;AGLESGAEPGDGDS(0.954)DT(0.008)T(0.038)K;AGLESGAEPGDGDS(0.982)DT(0.016)T(0.002)K;AGLESGAEPGDGDS(0.974)DT(0.015)T(0.011)K;AGLESGAEPGDGDS(0.998)DT(0.001)T(0.001)K;AGLESGAEPGDGDS(1)DTTK 304.2 5.44E-96 669395000 605986 613188 593849 525079 560888 421139 632134 457180 441197 658086 TRUE FALSE 652380.7541 582737.9756 613647.6293 482178.3661 538864.7189 437165.7398 549134.0465 516934.9957 479571.5176 636612.7077 1.024768664 0.91537283 0.963926139 0.757412411 0.846456114 0.686705959 0.862587315 0.812008603 0.753317538 1 19.28005643 -5.750317027 24.96264906 0.806800911 0.96275764 0.409950518 0.08237246 190.9923878 428653.1913 0.020869167 0.035717006 1.78E-06 5.750317027 0.15595673 AGLESGAEPGDGDS(ph)DTTKK ddPTM_A459_MK2206_30min_R1 4 AGLESGAEPGDGDSDTTKK 19 1 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLESGAEPGDGDS(0.959)DT(0.02)T(0.02)KK;AGLESGAEPGDGDS(0.971)DT(0.015)T(0.015)KK;AGLESGAEPGDGDS(0.695)DT(0.136)T(0.169)KK;AGLESGAEPGDGDS(0.628)DT(0.186)T(0.186)KK 144.18 3.33E-05 84381000 21443 25930.2 25673.6 23789.3 15162.7 14277.6 16287.8 19426.5 21058.3 16915.2 TRUE FALSE 19619.16025 24242.13927 23930.94756 25621.55601 14558.73755 15085.98537 15201.27058 19256.65616 23247.38564 19010.78268 1.032001711 1.275178391 1.25880917 1.347738094 0.765814738 0.793548884 0.799613085 1.01293337 1.222852632 1 14.21453031 -6.257005729 24.99990871 0.919519172 1.233940693 0.490589474 0.14735462 338.9393622 1911167.353 0.047277101 0.058940659 5.53E-07 6.257005729 0.314421522 AGLESGAEPGDGDS(ph)DTTKK ddPTM_A459_MK2206_30min_R2 1 AGLESGAEPGDGDSDTTKK 19 1 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLESGAEPGDGDS(0.485)DT(0.257)T(0.257)KK 52.095 0.038304 37255000 33145 27292 34891 22347 27903 18645 34104 25591 22793 28156 TRUE FALSE 35682.60668 25936.71897 36054.24853 20521.17862 26807.38802 19354.54854 29626.10383 28935.83157 24775.49394 27237.27203 1.310065364 0.95225098 1.32370997 0.753422685 0.984217068 0.710590566 1.087704518 1.062361588 0.909617304 1 14.7332946 -5.757655794 24.99999971 0.932025625 1.171032966 0.398968746 0.148495279 106.8527398 706015.8398 0.039824228 0.065731764 1.75E-06 5.757655794 0.239007341 AGLESGAEPGDGDSDT(ph)TKK ddPTM_A459_MK2206_30min_R2 1 AGLESGAEPGDGDSDTTKK 19 1 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLESGAEPGDGDS(0.27)DT(0.365)T(0.365)KK 68.42 0.023975 40521000 32113 26550 26082 20185 22024 15823 28885 21532 18440 27518 TRUE FALSE 34571.59597 25231.56561 26951.56086 18535.82093 21159.2271 16425.15535 25092.3648 24346.30633 20043.87787 26620.08991 1.298703201 0.947839233 1.012451909 0.696309479 0.79485934 0.617021032 0.942610069 0.914583926 0.752960562 1 14.70022782 -4.317184716 1.091355847 0.817418155 2.083071004 0.570561055 0.120855126 2.967676005 1.461710795 0.03757453 5.536378609 4.82E-05 4.317184716 1.265652849 AGLGS(ph)PERPPK ddPTM_A459_MK2206_30min_R1 1 AGLGSPERPPK 11 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 AGLGS(1)PERPPK 126.34 0.015079 574030000 5865.9 6320.3 6183.1 5539.2 5758.6 5329.5 5504.9 5122.7 5678.8 4524.6 TRUE FALSE 5366.974402 5908.847321 5763.408399 5965.830144 5529.222768 5631.251684 5137.678165 5077.912774 6269.131582 5085.141607 1.055422802 1.161982847 1.133382085 1.173188596 1.087329163 1.107393288 1.010331386 0.99857844 1.232833236 1 12.31207223 -6.742952644 2.202458395 1.062238758 1.131888269 0.140528199 0.070804728 0.575506419 5.736244289 0.026984828 0.025173421 1.81E-07 6.742952644 0.06964951 AGLGS(ph)PERPPK ddPTM_A459_MK2206_30min_R2 2 AGLGSPERPPK 11 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 AGLGS(1)PERPPK;AGLGS(1)PERPPK 116.03 0.028517 1374830000 387010 377050 359640 403070 430420 352810 433600 323440 319380 368910 TRUE FALSE 416639.7832 358326.2453 371630.2181 370137.8916 413519.5481 366236.4318 376667.7992 365714.7185 347159.0951 356872.4969 1.167475182 1.004073579 1.041352924 1.037171244 1.158731905 1.026238881 1.055468837 1.024776977 0.972781871 1 18.4450492 -7.849042493 1.618090294 0.986075102 1.069907144 0.308914092 0.051009701 0.517468786 2.513001061 0.0412251 0.015130067 1.42E-08 7.849042493 0.083832042 AGLLNTS(ph)GTK ddPTM_A459_MK2206_30min_R1 1 AGLLNTSGTK 10 0 A0A087WT26;H3BQD9;Q08AM6 A0A087WT26 VAC14 Protein VAC14 homolog 1 AGLLNT(0.241)S(0.743)GT(0.016)K 89.403 0.030891 12060000 4017.4 4436.6 4142.7 3999.3 4300.2 3846.5 4129.8 3689.1 3948.5 3304.5 TRUE FALSE 3675.699034 4147.776534 3861.505066 4307.326779 4128.913928 4064.285506 3854.308577 3656.846588 4358.960705 3713.886408 0.989717679 1.116829132 1.039747758 1.159789586 1.111750192 1.094348362 1.037810034 0.984641474 1.173692522 1 11.85871397 -9.622949242 9.386783986 0.999990197 1.078526375 0.126925999 0.061922956 0 0 0.058551831 0.014200905 2.38E-10 9.622949242 0.078536178 AGLLNTS(ph)GTK ddPTM_A459_MK2206_30min_R2 2 AGLLNTSGTK 10 0 A0A087WT26;H3BQD9;Q08AM6 A0A087WT26 VAC14 Protein VAC14 homolog 1 AGLLNTS(0.997)GT(0.003)K;AGLLNT(0.002)S(0.994)GT(0.004)K 166.29 0.00033071 12866100 152228 168911 149797 171796 162789 143961 169575 116542 131338 163928 TRUE FALSE 163882.6927 160523.1254 154791.1572 157759.7173 156397.0859 149439.5367 147309.5988 131774.4395 142761.5418 158579.0428 1.033444835 1.012259392 0.97611358 0.99483333 0.986240572 0.942366243 0.928934847 0.830970078 0.900254784 1 17.2748426 -6.924169618 1.605261554 0.899429724 1.003285215 0.485535553 0.041438885 0.290356178 1.531765403 0.019140761 0.015266827 1.19E-07 6.924169618 0.103855491 AGLQMKS(ph)PEK ddPTM_A459_MK2206_30min_R1 1 AGLQMKSPEK 10 1 Q9BRQ0 Q9BRQ0 PYGO2 Pygopus homolog 2 1 AGLQMKS(1)PEK 127.17 0.015816 19670000 2899.9 3037.2 3548.3 3262.2 1938.5 1878 2216.4 3241.6 2397.8 1653 TRUE FALSE 2653.248277 2839.477728 3307.451282 3513.455209 1861.28544 1984.330737 2068.548 3213.259033 2647.059891 1857.78612 1.428177468 1.528420144 1.780318653 1.891205437 1.001883597 1.068115816 1.113447871 1.729617311 1.424846414 1 10.8593687 -6.260608976 24.99950732 1.246245703 1.656650275 0.438759229 0.239627738 85.46332166 2572893.768 0.079785828 0.097013398 5.49E-07 6.260608976 0.410404572 AGLQMKS(ph)PEK ddPTM_A459_MK2206_30min_R2 1 AGLQMKSPEK 10 1 Q9BRQ0 Q9BRQ0 PYGO2 Pygopus homolog 2 1 AGLQMKS(1)PEK 119.39 0.025711 11084000 16383 22767 23646 21794 20627 16059 27496 19907 18173 21812 TRUE FALSE 17637.29508 21636.42389 24434.34584 20013.36048 19817.08034 16670.1365 23885.74217 22508.91325 19753.65469 21100.27623 0.835879819 1.025409509 1.158010709 0.94848808 0.939185825 0.79004352 1.132010876 1.066759175 0.93617991 1 14.36497427 -10.50522051 4.751391279 1.000000191 0.986935587 0.000244929 0.112287268 2.34E-07 4.98E-08 0.111797191 0.027114405 3.12E-11 10.50522051 -0.013064604 AGLQS(ph)LEASGR ddPTM_A459_MK2206_30min_R2 3 AGLQSLEASGR 11 0 O60784-3;O60784-4;O60784;O60784-2 O60784-3 TOM1 Target of Myb protein 1 1 AGLQS(1)LEASGR;AGLQS(1)LEASGR;AGLQS(1)LEASGR 147.7 0.00066196 51731000 60689 77710 90056 81262 72009 87203 74720 56052.6 58570 60543 TRUE FALSE 65335.3965 73851.0344 93058.42209 74622.63466 69181.56484 90521.57127 64909.17425 63378.86728 63664.31273 58567.48687 1.115557453 1.260956178 1.588909258 1.274130728 1.181228162 1.545594256 1.108279998 1.082151048 1.087024835 1 15.83781237 -7.456997552 11.44049894 1.069758529 1.327548596 0.453546725 0.139574305 0.906248125 155.9549887 0.059425361 0.040022277 3.49E-08 7.456997552 0.257790067 AGLQSLEAS(ph)GR ddPTM_A459_MK2206_30min_R2 1 AGLQSLEASGR 11 0 O60784-3;O60784-4;O60784;O60784-2 O60784-3 TOM1 Target of Myb protein 1 1 AGLQS(0.001)LEAS(0.999)GR 104.7 0.012121 11900000 17166 26637 24646 21808 16117 16814 23748 19389 19949 26084 TRUE FALSE 18480.24216 25314.24531 25467.68534 20026.21664 15484.1656 17453.86855 20629.85907 21923.20887 21684.12796 25232.88122 0.732387316 1.003224527 1.009305482 0.793655567 0.613650319 0.69171128 0.817578417 0.868834941 0.859359967 1 14.62301733 -5.827713553 10.88988072 0.788432541 0.92370274 0.131351378 0.121361222 0.80077386 127.6479296 0.035382721 0.052540075 1.49E-06 5.827713553 0.135270199 AGLREGS(ph)EEK ddPTM_A459_MK2206_30min_R1 1 AGLREGSEEK 10 1 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 AGLREGS(1)EEK 126.71 0.01619 10336000 2049.2 2098.4 2420.9 2086.2 1320.6 1230.9 1755 1960.4 673.81 1199.3 TRUE FALSE 1874.904779 1961.793779 2256.576053 2246.879485 1267.997706 1300.592494 1637.927152 1943.260429 743.8549608 1347.878338 1.391004459 1.455467992 1.674168943 1.666974994 0.940736022 0.964918314 1.215189165 1.441717976 0.551870996 1 10.39647457 -6.262132102 24.9991505 1.048256135 1.549463304 0.563864399 0.226542792 50.40289351 1818949.494 0.069452034 0.083496406 5.47E-07 6.262132102 0.501207169 AGLRVS(ph)APEVSVGHK ddPTM_A459_MK2206_30min_R2 1 AGLRVSAPEVSVGHK 15 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 AGLRVS(1)APEVSVGHK 60.949 0.034953 2564500 17698 26876 20737 33714 33376 28699 32354 18137 30134 24675 TRUE FALSE 19052.97249 25541.37692 21428.36123 30959.45835 32065.49054 29791.16056 28105.88094 20507.56817 32755.00085 23869.85677 0.798202213 1.070026401 0.897716372 1.297010646 1.343346583 1.248066163 1.177463326 0.859140814 1.372232819 1 14.54290229 -5.751565276 24.99740686 1.188324917 0.93678607 0.361755569 0.159895855 238.6250572 604100.3457 0.043961987 0.074973091 1.77E-06 5.751565276 -0.251538846 AGLS(ph)PAEPLLSR ddPTM_A459_MK2206_30min_R1 1 AGLSPAEPLLSR 12 0 O95402;B8ZZF3 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 1 AGLS(0.989)PAEPLLS(0.011)R 101.39 0.012577 6292100 2334.7 2289.9 2727 2206.6 2567.8 2040.1 2386.6 2624.1 2246.3 1935.6 TRUE FALSE 2136.121505 2140.827094 2541.898838 2376.552714 2465.519089 2155.608699 2227.394269 2601.15777 2479.810923 2175.396741 0.981945713 0.984108808 1.16847598 1.092468638 1.133365258 0.990903709 1.023902549 1.195716497 1.139935018 1 11.08706282 -5.230874178 22.54024463 1.095380689 0.98302702 0.305502875 0.066310613 256.5676277 189201.6107 0.017470419 0.046200809 5.88E-06 5.230874178 -0.112353669 AGLS(ph)PAEPLLSR ddPTM_A459_MK2206_30min_R2 1 AGLSPAEPLLSR 12 0 O95402;B8ZZF3 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 1 AGLS(0.999)PAEPLLS(0.001)R 119.21 0.0043318 2870700 17765 18975 15019 19616 18517 17419 16345 16609 15640 20501 TRUE FALSE 19125.10206 18032.72909 15519.72596 18013.31005 17789.92954 18081.89225 14198.88187 18779.85333 17000.33893 19832.05405 0.964353063 0.909271881 0.782557668 0.908292707 0.897029097 0.911750856 0.71595619 0.946944441 0.857215238 1 14.27554649 -10.77263847 3.331679046 1.000393385 0.87505636 0.208776033 0.071717236 24889499.66 37510230.77 101061.3503 0.01748461 1.69E-11 10.77263847 -0.125337025 AGLS(ph)PANCQSDR ddPTM_A459_MK2206_30min_R1 4 AGLSPANCQSDR 12 0 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 AGLS(1)PANCQSDR;AGLS(1)PANCQSDR;AGLS(1)PANCQSDR;AGLS(1)PANCQSDR 188.09 0.00010451 94411100 10591.6 9561.6 9034.7 6855.9 9246.6 9569.5 10314.9 8440.8 9011.3 8120.3 TRUE FALSE 9690.728801 8939.138102 8421.449736 7383.942606 8878.288342 10111.31682 9626.811842 8367.002976 9948.056882 9126.304069 1.061845927 0.979491592 0.922766727 0.809083562 0.972824078 1.107931178 1.054842329 0.916800811 1.090042235 1 13.15581501 -6.531841648 24.64454558 1.031180465 0.937733084 0.24197272 0.076087221 252.7404017 694932.7802 0.026327141 0.026365531 2.94E-07 6.531841648 -0.09344738 AGLS(ph)PANCQSDR ddPTM_A459_MK2206_30min_R2 2 AGLSPANCQSDR 12 0 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 AGLS(1)PANCQSDR;AGLS(1)PANCQSDR 160.84 0.00013905 71882000 49853 47499 45374 57237 44319 45048 51336 32389 39905 49725 TRUE FALSE 53669.78401 45140.26873 46886.74651 52560.55401 42578.81337 46762.33321 44595.52153 36622.35351 43375.86477 48102.47732 1.115738461 0.938418793 0.974726233 1.092678734 0.885168826 0.972139811 0.927094071 0.761340279 0.901738688 1 15.55382358 -6.703710994 1.196376509 0.880767482 1.018449795 0.300914061 0.080949805 0.546504673 1.654535373 0.039595118 0.037722085 1.98E-07 6.703710994 0.137682313 AGLVGPEFHEK ddPTM_A459_MK2206_30min_R2 1 AGLVGPEFHEK 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 91.313 0.037364 2625300 33064 37141 28942 33549 31191 32084 35513 26812 27565 27947 FALSE TRUE 35595.40526 35296.63195 29906.91183 30807.93938 29966.28462 33304.9791 30850.10044 30316.42046 29962.55387 27035.09168 1.316637121 1.305585806 1.106225649 1.139553723 1.108421787 1.231916633 1.141113217 1.121372948 1.10828379 1 14.72254563 -1.52287889 0.518263391 1.114153093 9.449119054 0.584922627 0.060076509 85.82374628 0.865876174 0.031952662 785.6627085 0.02999999 1.52287889 8.334965961 AGMSS(ph)NQSISSPVLDAVPR ddPTM_A459_MK2206_30min_R2 1 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMS(0.163)S(0.792)NQS(0.018)IS(0.012)S(0.014)PVLDAVPR 123.92 0.0015524 6410400 34371 39098 30824 36934 33913 37033 33742 28876 31609 34873 TRUE FALSE 37002.47019 37156.45017 31851.65678 33916.37405 32581.40522 38442.31677 29311.63487 32650.19235 34358.29368 33735.09687 1.09685383 1.101418215 0.944169714 1.005373549 0.965801443 1.139534797 0.868876559 0.96784048 1.018473248 1 15.04196268 -5.247189501 24.37787186 0.988487008 1.099136056 0.320352962 0.064307331 669.0491009 1144563.591 0.016141934 0.042229431 5.66E-06 5.247189501 0.110649049 AGMSSNQS(ph)ISSPVLDAVPR ddPTM_A459_MK2206_30min_R1 1 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMS(0.001)S(0.014)NQS(0.461)IS(0.262)S(0.262)PVLDAVPR 86.411 0.01359 62414000 3299.7 2932.2 3323.3 2825.2 3449.5 3251.2 3636.2 3212.1 3789.5 3971.6 TRUE FALSE 3019.043188 2741.313247 3097.723655 3042.797394 3312.099111 3435.280134 3393.635733 3184.016948 4183.432086 4463.631792 0.676364747 0.614144126 0.693991754 0.681686469 0.742018891 0.769615482 0.76028577 0.713324283 0.937226071 1 12.12400231 -8.419212213 0.290678175 1.052965708 0.620447605 0.828434133 0.047290104 0.780652623 0.215585737 0.123879978 0.078968579 3.81E-09 8.419212213 -0.432518103 AGMSSNQS(ph)ISSPVLDAVPR ddPTM_A459_MK2206_30min_R2 4 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSS(0.01)NQS(0.411)IS(0.22)S(0.36)PVLDAVPR;AGMS(0.026)S(0.081)NQS(0.413)IS(0.24)S(0.24)PVLDAVPR;AGMSSNQS(0.462)IS(0.462)S(0.075)PVLDAVPR;AGMSSNQS(0.919)IS(0.075)S(0.006)PVLDAVPR 140.3 0.00045605 104744900 189725 185641 188061 234725 196791 209864 216591 171646 176749 210174 TRUE FALSE 204250.4919 176422.3379 194330.8599 215547.2167 189063.9965 217850.5216 188152.3415 194080.7215 192122.3085 203316.0396 1.004596058 0.867724643 0.955806833 1.060158446 0.929902023 1.071487139 0.925418092 0.95457654 0.944944181 1 17.63336451 -5.523799949 24.99837591 0.982954165 0.93006169 0.104446884 0.056484871 57.35716665 1556473.582 0.014718853 0.025782347 2.99E-06 5.523799949 -0.052892475 AGMSSNQSIS(ph)SPVLDAVPR ddPTM_A459_MK2206_30min_R1 5 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMS(0.002)S(0.002)NQS(0.019)IS(0.489)S(0.489)PVLDAVPR;AGMSSNQS(0.348)IS(0.552)S(0.1)PVLDAVPR;AGMSSNQS(0.01)IS(0.495)S(0.495)PVLDAVPR;AGMSS(0.002)NQS(0.034)IS(0.637)S(0.327)PVLDAVPR;AGMSSNQS(0.012)IS(0.785)S(0.203)PVLDAVPR 202.94 1.77E-21 101867000 6013.62 5759.14 6099.82 4793.69 5874.16 5650.57 6232.47 5507.21 5633.73 5977.61 TRUE FALSE 5502.13004 5384.218939 5685.781213 5162.900834 5640.179768 5970.50039 5816.713298 5459.061044 6219.376394 6718.161455 0.818993422 0.801442325 0.846329945 0.768499071 0.839542158 0.888710465 0.865819218 0.812582591 0.92575572 1 12.71385075 -9.687055209 0.250520522 1.071511717 0.795071275 0.728842206 0.03334866 4.31613094 0.400063674 0.32471941 0.063877818 2.06E-10 9.687055209 -0.276440442 AGMSSNQSIS(ph)SPVLDAVPR ddPTM_A459_MK2206_30min_R2 2 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSS(0.001)NQS(0.374)IS(0.578)S(0.047)PVLDAVPR;AGMS(0.023)S(0.023)NQS(0.269)IS(0.427)S(0.258)PVLDAVPR 149.72 0.00011408 93089100 78219 79909 72286 83012 81541 70510 86206 63342 62845 77269 TRUE FALSE 84207.50678 75940.83526 74695.97916 76229.65406 78339.29063 73193.30746 74887.04865 71621.01689 68311.1445 74747.71886 1.126556209 1.015961911 0.999307809 1.019825825 1.048049249 0.979204564 1.001864001 0.958169935 0.913889354 1 16.18974193 -1.522878745 0.3739152 0.969643717 2.741433133 0.585015282 0.034196585 53.1960163 0.731641685 0.028367472 67.93126414 0.03 1.522878745 1.771789416 AGMSSNQSIS(ph)SPVLDAVPRT(ph)PSR ddPTM_A459_MK2206_30min_R1 4 AGMSSNQSISSPVLDAVPRTPSR 23 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMSS(0.002)NQS(0.001)IS(0.783)S(0.214)PVLDAVPRT(0.927)PS(0.073)R;AGMSSNQSIS(0.556)S(0.444)PVLDAVPRT(0.71)PS(0.29)R;AGMSSNQSIS(0.687)S(0.313)PVLDAVPRT(0.936)PS(0.064)R;AGMSSNQSIS(0.557)S(0.442)PVLDAVPRT(0.613)PS(0.387)R 165.94 1.31E-11 103999000 10129 9784.2 10252.3 9700.7 11626 9494.4 10193.4 10099 7151.3 5001.95 TRUE FALSE 9267.475361 9147.246802 9556.402441 10447.84959 11162.9118 10031.96472 9513.416885 10010.70551 7894.703226 5621.629329 1.64853903 1.627152248 1.699934642 1.858509159 1.98570755 1.78452974 1.692288183 1.780748058 1.404344322 1 12.45677262 -8.537445238 2.276392991 1.000748373 1.765335311 0.84841732 0.101450905 0.125262076 1.52019373 0.110268303 0.030275423 2.90E-09 8.537445238 0.764586938 AGMSSNQSIS(ph)SPVLDAVPRT(ph)PSR ddPTM_A459_MK2206_30min_R2 4 AGMSSNQSISSPVLDAVPRTPSR 23 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMSSNQSIS(0.554)S(0.446)PVLDAVPRT(0.851)PS(0.149)R;AGMSSNQSIS(0.868)S(0.132)PVLDAVPRT(0.893)PS(0.107)R;AGMSSNQSIS(0.571)S(0.429)PVLDAVPRT(0.992)PS(0.008)R;AGMSS(0.001)NQS(0.003)IS(0.733)S(0.264)PVLDAVPRT(0.818)PS(0.182)R 166.24 1.27E-11 61708700 45242.2 95742 67906 92716 111543 105206 90697 64382 99898 69047 TRUE FALSE 48705.97762 90987.5915 70169.95215 85140.80622 107163.2614 109209.6881 78788.37495 72796.94846 108586.9475 66794.00204 0.729196876 1.362212006 1.050542713 1.27467742 1.604384497 1.635022378 1.179572604 1.089872537 1.625699077 1 16.02743094 -4.47912191 2.145810003 1.328636235 3.78E-27 0.353669581 0.231899126 2.760940596 6.24744503 0.062481977 9.712939331 3.32E-05 4.47912191 -1.328636235 AGMSSNQSISS(ph)PVLDAVPR ddPTM_A459_MK2206_30min_R1 13 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSSNQS(0.193)IS(0.193)S(0.614)PVLDAVPR;AGMS(0.003)S(0.004)NQS(0.154)IS(0.079)S(0.76)PVLDAVPR;AGMSSNQS(0.134)IS(0.21)S(0.657)PVLDAVPR;AGMS(0.001)S(0.001)NQS(0.048)IS(0.318)S(0.632)PVLDAVPR;AGMSSNQS(0.137)IS(0.205)S(0.658)PVLDAVPR;AGMSSNQS(0.001)IS(0.094)S(0.905)PVLDAVPR;AGMS(0.125)S(0.027)NQS(0.027)IS(0.169)S(0.652)PVLDAVPR;AGMSSNQS(0.052)IS(0.361)S(0.587)PVLDAVPR;AGMSSNQSIS(0.003)S(0.997)PVLDAVPR;AGMSSNQSIS(0.004)S(0.996)PVLDAVPR;AGMSSNQSIS(0.286)S(0.714)PVLDAVPR;AGMSSNQS(0.001)IS(0.031)S(0.968)PVLDAVPR;AGMSSNQS(0.001)IS(0.079)S(0.92)PVLDAVPR 292.35 1.37E-85 1376133000 35674.9 34302.52 36574.5 28040 34535.9 32556.8 38758.02 33129 35925.7 36834.84 TRUE FALSE 32640.56242 32069.41971 34091.92484 30199.64566 33160.26197 34400.13788 36172.5432 32839.35665 39660.30508 41398.21807 0.788453319 0.774657007 0.823511891 0.729491439 0.801006988 0.830956971 0.873770536 0.793255318 0.958019618 1 15.33728105 -8.32716306 0.625277866 1.006096499 0.781455247 0.765297067 0.038694769 0.355796115 0.328195264 0.037939266 0.017002396 4.71E-09 8.32716306 -0.224641253 AGMSSNQSISS(ph)PVLDAVPR ddPTM_A459_MK2206_30min_R2 11 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSSNQS(0.314)IS(0.172)S(0.514)PVLDAVPR;AGMSSNQS(0.133)IS(0.212)S(0.655)PVLDAVPR;AGMSSNQS(0.027)IS(0.012)S(0.961)PVLDAVPR;AGMSSNQS(0.008)IS(0.083)S(0.91)PVLDAVPR;AGMSS(0.034)NQS(0.284)IS(0.158)S(0.523)PVLDAVPR;AGMSSNQS(0.001)IS(0.027)S(0.972)PVLDAVPR;AGMSSNQS(0.019)IS(0.058)S(0.922)PVLDAVPR;AGMSSNQS(0.001)IS(0.024)S(0.975)PVLDAVPR;AGMSSNQS(0.002)IS(0.081)S(0.917)PVLDAVPR;AGMSSNQSIS(0.01)S(0.989)PVLDAVPR;AGMSSNQS(0.002)IS(0.015)S(0.983)PVLDAVPR 313.59 4.72E-117 1282258400 270764.3 285092 275795 308944 274812 287132.6 287528 255375.4 247935.8 299898 TRUE FALSE 291494.223 270934.7458 284989.8676 283702.2869 264021.5001 298059.6323 249775.2282 288753.8416 269500.8077 290112.3528 1.004763224 0.933895931 0.982343099 0.977904885 0.910066385 1.027393799 0.860960334 0.995317293 0.928953232 1 18.1462522 AGMSSNQSISS(ph)PVLDAVPRT(ph)PSR ddPTM_A459_MK2206_30min_R2 1 AGMSSNQSISSPVLDAVPRTPSR 23 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMSSNQSIS(0.436)S(0.564)PVLDAVPRT(0.895)PS(0.105)R 164.19 8.42E-10 34769000 27895 58800 42593 56834 72657 71142 56136 43159 63076 46042 TRUE FALSE 30030.66265 55880.0775 44013.02936 52190.4804 69804.12111 73849.35866 48765.27577 48800.02949 68562.23646 44539.65331 0.674245541 1.25461411 0.98817629 1.171775632 1.567235394 1.658058677 1.094873268 1.095653555 1.53935272 1 15.44280271 -4.373945067 0.947942052 1.311499596 8.93E-11 0.351540181 0.234311792 4.862046974 2.04827848 0.080982177 7.867608661 4.23E-05 4.373945067 -1.311499595 AGMSSNQSISSPVLDAVPRT(ph)PSR ddPTM_A459_MK2206_30min_R1 2 AGMSSNQSISSPVLDAVPRTPSR 23 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSSNQSISSPVLDAVPRT(0.797)PS(0.203)R;AGMSSNQSISSPVLDAVPRT(0.832)PS(0.168)R 163.52 5.55E-10 15288200 2646.8 2421.1 2544.2 2061.86 2621.9 2547.4 2209 2694.3 1808.88 1444.84 TRUE FALSE 2421.675761 2263.48595 2371.506793 2220.664814 2517.464171 2691.631587 2061.641641 2670.744019 1996.919549 1623.837687 1.491328709 1.393911453 1.460433399 1.367541123 1.550317615 1.657574281 1.269610662 1.644711193 1.229753174 1 10.66519172 -8.51734681 5.28903482 1.000304609 1.472622611 0.64865711 0.113625339 0.08185837 9.434380737 0.10471007 0.027203571 3.04E-09 8.51734681 0.472318001 AGMTHIVR ddPTM_A459_MK2206_30min_R1 2 AGMTHIVR 8 0 H7C422;H7C3M2;F8WCR1;P39023 H7C422;P39023 RPL3 60S ribosomal protein L3 0 ; 122.18 0.0091774 22472800 15955.5 16986.9 15920.2 14986.2 17916.4 17166.4 17202.2 15529.3 13338.2 12958.5 FALSE TRUE 14598.40094 15881.04972 14839.58118 16140.43972 17202.75185 18138.34673 16054.67263 15393.52897 14724.75362 14563.89681 1.002369155 1.090439594 1.0189293 1.108250074 1.18119155 1.245432247 1.102361053 1.056964984 1.011044902 1 13.8301088 -8.001954285 2.652509558 1.006357018 1.110968916 0.274754282 0.066200226 0.431187607 5.785881671 0.057700213 0.020349805 9.96E-09 8.001954285 0.104611897 AGMTHIVR ddPTM_A459_MK2206_30min_R2 2 AGMTHIVR 8 0 H7C422;H7C3M2;F8WCR1;P39023 H7C422;P39023 RPL3 60S ribosomal protein L3 0 ; 130.27 0.0054287 19603100 172730 190688 187217 220610 212737 213272 235900 171390 195536 176754 FALSE TRUE 185954.3416 181218.7112 193458.7213 202585.4573 204383.8765 221388.2154 204926.0466 193791.2615 212543.3678 170986.5315 1.087537948 1.059842022 1.131426667 1.184803596 1.195321495 1.294769907 1.198492331 1.133371499 1.243041578 1 17.38352316 -5.552103859 2.607063344 1.190974938 1.073693986 0.233532338 0.073405606 0.342963303 4.665643694 0.02002707 0.043905739 2.80E-06 5.552103859 -0.117280951 AGMTS(ph)SPDATTGQTFG ddPTM_A459_MK2206_30min_R2 1 AGMTSSPDATTGQTFG 16 0 Q9UQR1;G5E9X2;Q9UQR1-2 Q9UQR1 ZNF148 Zinc finger protein 148 1 AGMT(0.068)S(0.519)S(0.414)PDATTGQTFG 79.466 0.024634 9810800 51534 62012 58747 63239 49433 58198 68105 51777 48002 53839 TRUE FALSE 55479.48266 58932.57425 60705.59566 58072.17141 47492.01204 60412.76567 59162.73169 58544.43168 52177.12719 52082.23784 1.065228473 1.131529226 1.165571953 1.115009144 0.911865811 1.159949499 1.135948341 1.124076731 1.001821914 1 15.66850382 -8.270242826 23.35966806 1.00091089 1.101580383 0.252519904 0.068979072 428.4532945 1136854.219 0.065049884 0.017908532 5.37E-09 8.270242826 0.100669493 AGNALT(ph)PELAPVQIK ddPTM_A459_MK2206_30min_R1 2 AGNALTPELAPVQIK 15 0 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 AGNALT(1)PELAPVQIK;AGNALT(1)PELAPVQIK 187.78 4.51E-05 11286500 5347.8 4892.7 4537.6 4081.5 4548.2 4442.6 4637.4 4591.4 4406.3 4002.3 TRUE FALSE 4892.941528 4574.184341 4229.600354 4395.857837 4367.035563 4694.136173 4328.047507 4551.257874 4864.350653 4498.13514 1.087771126 1.016906829 0.940300863 0.977262288 0.970854683 1.043573843 0.962187078 1.011809946 1.081414965 1 12.13511129 -8.013314195 24.2272214 1.042675819 0.997123773 0.114878672 0.044296532 813.3265498 1479961.533 0.027812595 0.011539997 9.70E-09 8.013314195 -0.045552047 AGNALT(ph)PELAPVQIK ddPTM_A459_MK2206_30min_R2 2 AGNALTPELAPVQIK 15 0 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 AGNALT(1)PELAPVQIK;AGNALT(1)PELAPVQIK 119.77 0.0043707 17570500 70122 69853 76718 75964 69609 59725 74387 56603 59232 67873 TRUE FALSE 75490.59423 66384.2016 79275.73983 69757.4982 66875.8009 61997.87673 64619.89755 64001.20645 64383.89229 65658.30957 1.149749281 1.0110556 1.207398429 1.062432138 1.018542837 0.944250273 0.984184606 0.974761715 0.98059016 1 16.00268999 -6.253214076 2.639623834 0.976877403 1.113059797 0.622865582 0.048777751 0.181416914 2.511392668 0.015135367 0.019206598 5.58E-07 6.253214076 0.136182394 AGNS(ph)DSEEDDANGR ddPTM_A459_MK2206_30min_R2 3 AGNSDSEEDDANGR 14 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;A0A0A0MT65;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2;A0A087WYF6 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 AGNS(0.986)DS(0.014)EEDDANGR;AGNS(0.868)DS(0.132)EEDDANGR;AGNS(0.765)DS(0.235)EEDDANGR 119.62 0.0025866 0 4627 2849.11 3344.4 2716.11 4291.05 5053.87 4070.7 2632.37 2695.47 3954.91 TRUE FALSE 4981.246678 2707.62734 3455.900627 2494.195125 4122.561816 5246.198564 3536.2122 2976.429797 2929.917108 3825.861611 1.301993429 0.70771701 0.903299957 0.651930304 1.077551212 1.371246296 0.924291718 0.777976336 0.765818894 1 11.90156897 AGNWPGS(ph)PQVSGPSPAAR ddPTM_A459_MK2206_30min_R2 2 AGNWPGSPQVSGPSPAAR 18 0 H7C3E5;O60244 H7C3E5 MED14 Mediator of RNA polymerase II transcription subunit 14 1 AGNWPGS(0.995)PQVS(0.004)GPSPAAR;AGNWPGS(0.999)PQVS(0.001)GPSPAAR 139.78 0.00032358 9887900 20005.8 32412.9 23938.5 33784.3 32620.2 28330.4 35178.5 21645.8 24973.9 26808.3 TRUE FALSE 21537.45943 30803.32252 24736.59764 31024.01462 31339.36704 29408.53322 30559.52069 24474.98038 27146.08468 25933.54737 0.83048644 1.187778983 0.953845507 1.196288891 1.20844891 1.133995778 1.178377962 0.943757521 1.046755552 1 14.66253194 -7.767872616 24.9977219 0.996442407 1.105693289 0.135776618 0.116492399 300.3337057 1166986.416 0.060622488 0.030235496 1.71E-08 7.767872616 0.109250881 AGPDLPSLPSHALEDEGWAAAAPS(ph)PGSAR ddPTM_A459_MK2206_30min_R1 3 AGPDLPSLPSHALEDEGWAAAAPSPGSAR 29 0 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 AGPDLPSLPSHALEDEGWAAAAPS(0.978)PGS(0.022)AR;AGPDLPSLPSHALEDEGWAAAAPS(0.875)PGS(0.125)AR;AGPDLPSLPSHALEDEGWAAAAPS(0.882)PGS(0.118)AR 278.41 7.11E-98 257574000 8705.2 7192.1 8118.4 7018 12246.3 10756.9 12568.5 9872.2 7373.5 7532.8 TRUE FALSE 7964.777027 6723.892983 7567.345627 7558.527576 11758.50394 11365.94638 11730.0783 9785.888396 8140.001711 8466.020134 0.940793537 0.794221237 0.893849236 0.892807654 1.388905738 1.342537131 1.385548122 1.155901857 0.961490946 1 13.0474682 -6.232751057 16.64177356 1.229355212 0.875212663 0.55126986 0.14280427 9.055648248 5252.069293 0.044179525 0.056944354 5.85E-07 6.232751057 -0.354142549 AGPDLPSLPSHALEDEGWAAAAPS(ph)PGSAR ddPTM_A459_MK2206_30min_R2 5 AGPDLPSLPSHALEDEGWAAAAPSPGSAR 29 0 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 AGPDLPSLPSHALEDEGWAAAAPS(0.977)PGS(0.023)AR;AGPDLPSLPSHALEDEGWAAAAPS(0.571)PGS(0.429)AR;AGPDLPSLPSHALEDEGWAAAAPS(0.934)PGS(0.066)AR;AGPDLPSLPSHALEDEGWAAAAPS(0.818)PGS(0.182)AR;AGPDLPSLPSHALEDEGWAAAAPS(0.982)PGS(0.018)AR 203.45 2.59E-42 220815000 130387.1 197318.6 165014.2 243920.7 213847.2 239915.9 222185 174278.7 200320.5 207395.3 TRUE FALSE 140369.6366 187520.0453 170515.6911 223991.5985 205450.4844 249046.0677 193011.8426 197057.5245 217744.015 200628.0083 0.699651249 0.934665338 0.849909703 1.116452286 1.024036904 1.241332503 0.962038372 0.982203463 1.08531215 1 17.6141635 -4.769162676 0.950429768 1.057684409 0.53510065 0.573069765 0.091786033 1.564747927 1.09640035 0.031432549 0.853039121 1.70E-05 4.769162676 -0.522583759 AGPDLPSLPSHALEDEGWAAAAPSPGS(ph)AR ddPTM_A459_MK2206_30min_R1 1 AGPDLPSLPSHALEDEGWAAAAPSPGSAR 29 0 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 AGPDLPSLPSHALEDEGWAAAAPS(0.438)PGS(0.562)AR 183.91 1.15E-28 126530000 6388.7 5667.1 5999.7 5307.3 8033.8 6739.6 8494.4 7579.1 6123.5 5926.1 TRUE FALSE 5845.307517 5298.17076 5592.45708 5716.069166 7713.796734 7121.190328 7927.754075 7512.836728 6760.059738 6660.270008 0.87763822 0.795488885 0.839674228 0.858233849 1.158180783 1.06920445 1.190305208 1.128007831 1.014982836 1 12.70136495 -6.230932569 8.564618569 1.10346327 0.838686957 0.812723015 0.058824443 0.128068945 33.60044981 0.017034108 0.021772157 5.88E-07 6.230932569 -0.264776313 AGPGS(ph)SPLFSLLPGYR ddPTM_A459_MK2206_30min_R1 1 AGPGSSPLFSLLPGYR 16 0 Q9H0W8-2;Q9H0W8 Q9H0W8-2 SMG9 Protein SMG9 1 AGPGS(0.651)S(0.349)PLFSLLPGYR 252.52 1.31E-29 28549000 1370.4 1601.6 1550.6 1565.4 1806.8 1852.1 1796.2 1792 1609.4 1671.1 TRUE FALSE 1253.840284 1497.335549 1445.349592 1685.967379 1734.83133 1956.964301 1676.378775 1776.332733 1776.702889 1878.128484 0.667600909 0.79724873 0.769569071 0.897684793 0.923702156 1.041975732 0.892579389 0.945799368 0.945996456 1 10.87508005 -5.672351358 1.180919906 0.960267614 0.704317956 0.814065131 0.046278056 0.231036862 0.609582814 0.016130309 0.049551741 2.13E-06 5.672351358 -0.255949658 AGPGSS(ph)PLFSLLPGYR ddPTM_A459_MK2206_30min_R1 1 AGPGSSPLFSLLPGYR 16 0 Q9H0W8-2;Q9H0W8 Q9H0W8-2 SMG9 Protein SMG9 1 AGPGS(0.046)S(0.943)PLFS(0.01)LLPGYR 132.24 0.00063538 24542000 1902.4 1417.4 2113.8 1628.7 1968.6 1878.6 2257.8 2170.8 2030 1730.1 TRUE FALSE 1740.59089 1325.127002 1970.321145 1754.142756 1890.186493 1984.964709 2107.186282 2151.820924 2241.025764 1944.43785 0.895164065 0.681496198 1.013311454 0.90213362 0.972099208 1.020842455 1.083699477 1.106654515 1.152531445 1 10.92513741 -6.075488953 0.673320923 1.100165471 0.785005319 0.600467383 0.080473509 0.592167337 0.535975849 0.047183864 0.11252013 8.40E-07 6.075488953 -0.315160151 AGPSAQEPGS(ph)QTPLK ddPTM_A459_MK2206_30min_R2 1 AGPSAQEPGSQTPLK 15 0 A0A087X2D8;O60271-4;O60271-2;O60271-9;O60271 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 AGPS(0.001)AQEPGS(0.87)QT(0.129)PLK 115.1 0.0024132 22060000 63769 77031 58912 70894 75360 60063 66223 58256 57387 67338 TRUE FALSE 68651.20367 73205.75255 60876.09668 65101.73342 72400.98775 62348.73955 57527.84055 65870.25922 62378.41753 65140.76657 1.053890018 1.123808583 0.934531475 0.999400788 1.11145434 0.957138561 0.883131157 1.011198711 0.957594158 1 15.99127308 -6.806349353 24.49401482 0.957594667 1.040388691 0.324609578 0.059408653 136.2145932 74290.64312 0.021574583 0.019027093 1.56E-07 6.806349353 0.082794024 AGPSAQEPGSQT(ph)PLK ddPTM_A459_MK2206_30min_R1 1 AGPSAQEPGSQTPLK 15 0 A0A087X2D8;O60271-4;O60271-2;O60271-9;O60271 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 AGPS(0.037)AQEPGS(0.045)QT(0.919)PLK 110.35 0.0082385 10704000 3101.3 2741.5 2741.7 2595.2 2866 2432.8 3035.8 2548.9 2667.2 2439.6 TRUE FALSE 2837.518149 2563.027852 2555.601043 2795.082754 2751.841151 2570.543034 2833.287321 2526.615236 2944.464985 2741.836066 1.034897084 0.934785228 0.932076529 1.019420084 1.003649046 0.937526158 1.03335402 0.921504851 1.073902638 1 11.4209266 -8.272622934 24.98992759 1.036951311 0.977081668 0.220672852 0.044951355 1209.856676 2703426.987 0.039557846 0.010622616 5.34E-09 8.272622934 -0.059869643 AGPSAQEPGSQT(ph)PLK ddPTM_A459_MK2206_30min_R2 1 AGPSAQEPGSQTPLK 15 0 A0A087X2D8;O60271-4;O60271-2;O60271-9;O60271 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 AGPSAQEPGS(0.06)QT(0.94)PLK 128.74 0.002207 23359000 77541 91137 68696 81484 80006 65483 86030 60015 66412 97106 TRUE FALSE 83477.59858 86611.26911 70986.29035 74826.49655 76864.56244 67975.00145 74734.15766 67859.16656 72188.39571 93937.43917 0.888650993 0.922010115 0.755676235 0.7965567 0.818252692 0.723619912 0.795573717 0.722386805 0.768473107 1 16.51941264 -5.257538679 24.82290808 0.785643118 0.905330566 0.234859139 0.075383992 346.306155 2203766.428 0.017836424 0.043536564 5.53E-06 5.257538679 0.119687448 AGPSFS(ph)K ddPTM_A459_MK2206_30min_R2 1 AGPSFSK 7 0 Q96M83;A0A0A6YYA4 Q96M83 CCDC7 Coiled-coil domain-containing protein 7 1 AGPSFS(1)K 105.14 0.017677 71869000 334450 447920 479040 459560 451090 351730 529260 359360 388560 437680 TRUE FALSE 360055.7491 425676.9441 495010.9545 422012.4779 433377.9401 365115.3316 459767.5262 406329.5859 422356.2464 423398.5374 0.850394409 1.005381234 1.169137138 0.996726348 1.023569762 0.862344338 1.085897767 0.959685851 0.997538274 1 18.69165676 AGQAVDDFIEK ddPTM_A459_MK2206_30min_R1 1 AGQAVDDFIEK 11 0 P52209-2;P52209;K7EM49;K7EMN2;K7EPF6 P52209-2 PGD "6-phosphogluconate dehydrogenase, decarboxylating" 0 180.97 0.00062032 6653800 1822.2 2063.7 1877.9 2002 1943.9 1445.8 1551.7 1834.7 1738.3 1945.9 FALSE TRUE 1667.212321 1929.352755 1750.43338 2156.194387 1866.470347 1527.659947 1448.188924 1818.659411 1919.002506 2186.972783 0.762337938 0.882202454 0.800391022 0.985926484 0.85344928 0.698527187 0.662188819 0.831587583 0.87746977 1 11.09471955 -4.725463898 22.60235896 0.831478048 0.762336188 0.042302848 0.102335771 7154.517884 4494086.897 0.026727118 4.502214931 1.88E-05 4.725463898 -0.06914186 AGQAVDDFIEK ddPTM_A459_MK2206_30min_R2 4 AGQAVDDFIEK 11 0 P52209-2;P52209;K7EM49;K7EMN2;K7EPF6 P52209-2 PGD "6-phosphogluconate dehydrogenase, decarboxylating" 0 ;;; 180.88 0.00062723 15679900 110461 132622 122525 135229 124962 109893 141455 104845 111287 124267 FALSE TRUE 118917.9791 126036.1843 126609.9223 124180.3581 120055.364 114075.0551 122881.7886 118548.6015 120966.5421 120212.178 0.989234045 1.048447724 1.053220435 1.033009802 0.998695523 0.948947578 1.022207489 0.986161332 1.006275272 1 16.87522353 -6.292412161 5.011758718 0.991867179 1.033980398 0.368339513 0.023808963 0.19779034 13.49028137 0.007401969 0.008697385 5.10E-07 6.292412161 0.042113219 AGQDMGLEHGFEKPLDS(ph)AMSAEEDTDVR ddPTM_A459_MK2206_30min_R1 1 AGQDMGLEHGFEKPLDSAMSAEEDTDVR 28 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 AGQDMGLEHGFEKPLDS(0.755)AMS(0.225)AEEDT(0.021)DVR 72.755 0.00010479 8854300 745.24 773.18 766 660.41 825.74 731.68 919.78 805.02 692.56 564.14 TRUE FALSE 681.8534246 722.8458415 714.0060542 711.2748926 792.8490273 773.1070893 858.4231544 797.981795 764.5540904 634.0299222 1.075427832 1.140081589 1.126139365 1.121831743 1.250491498 1.219354264 1.353915839 1.258586964 1.205864366 1 9.308407118 -6.254870667 21.95128561 1.234824799 1.118332991 0.221894403 0.085790751 122.6690295 409930.5861 0.024454013 0.030711847 5.56E-07 6.254870667 -0.116491808 AGQEPS(ph)PKPGTDVIPAAPR ddPTM_A459_MK2206_30min_R1 2 AGQEPSPKPGTDVIPAAPR 19 1 Q4VC44-2;Q4VC44;Q4VC44-3;I3L0R3;I3L231 Q4VC44-2 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 1 AGQEPS(0.851)PKPGT(0.149)DVIPAAPR;AGQEPS(0.954)PKPGT(0.046)DVIPAAPR 67.994 0.01094 15732900 2121.61 2164.13 2078.5 1960.93 1702.25 2059.77 2074.72 1971.07 1847.41 1693.57 TRUE FALSE 1941.155928 2023.244744 1937.417211 2111.961168 1634.445778 2176.392397 1936.319214 1953.837143 2039.454881 1903.382237 1.019845562 1.062973429 1.017881313 1.109583313 0.858706016 1.143434227 1.017304447 1.026508026 1.07148992 1 10.8943496 AGQEPS(ph)PKPGTDVIPAAPR ddPTM_A459_MK2206_30min_R2 2 AGQEPSPKPGTDVIPAAPR 19 1 Q4VC44-2;Q4VC44;Q4VC44-3;I3L0R3;I3L231 Q4VC44-2 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 1 AGQEPS(0.986)PKPGT(0.014)DVIPAAPR;AGQEPS(0.993)PKPGT(0.007)DVIPAAPR 68.291 0.010678 37635000 60710 67773 62955 54958 60896 46494 76473 43994 44750 68674 TRUE FALSE 65358.00428 64407.49137 65053.88828 50467.7556 58504.91706 48263.36175 66432.00324 49744.16685 48642.27411 66433.173 0.983815785 0.96950798 0.979238012 0.759677031 0.880658177 0.726494906 0.999982392 0.748785051 0.732198568 1 16.0196162 -5.744287281 24.77417378 0.829137876 0.976719426 0.313312455 0.096103573 249.0779715 359760.3258 0.024925685 0.043033259 1.80E-06 5.744287281 0.14758155 AGQHS(ph)PLR ddPTM_A459_MK2206_30min_R2 2 AGQHSPLR 8 0 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 AGQHS(1)PLR;AGQHS(1)PLR 100.82 0.011598 16895200 91064 26274 49090 43288 45812 35907 48056 121650 65147 78408 TRUE FALSE 98035.92986 24969.27137 50726.6361 39751.23193 44013.19069 37273.46605 41746.18947 137550.0727 70813.3683 75849.55338 1.292505038 0.329194705 0.668779628 0.524079974 0.580269609 0.491413125 0.55038148 1.81345923 0.93360297 1 16.21085307 -7.730873817 24.98928314 1.280148726 0.611676958 0.42737992 0.325032615 155.5770258 127194.1355 0.142401876 0.082203815 1.86E-08 7.730873817 -0.668471768 AGQNQPAEPDASACTPES(ph)PQEELLSRPAPADVPR ddPTM_A459_MK2206_30min_R2 1 AGQNQPAEPDASACTPESPQEELLSRPAPADVPR 34 1 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 AGQNQPAEPDAS(0.033)ACT(0.02)PES(0.944)PQEELLS(0.003)RPAPADVPR 76.835 4.14E-06 4703800 4265 8896.3 6543.5 6368.5 9680.6 5867 7039.1 5492.4 7292.8 6526.3 TRUE FALSE 4591.531679 8454.522678 6761.657024 5848.173178 9300.491003 6090.272796 6114.857715 6210.275538 7927.114562 6313.347365 0.727273729 1.339150563 1.07100982 0.92631893 1.47314736 0.964666197 0.968560315 0.983673981 1.255611976 1 12.62418942 -10.28871119 14.91481826 0.999989897 1.083963699 0.012133686 0.208782821 0 0 0.192485765 0.046684655 5.14E-11 10.28871119 0.083973803 AGQTQPNPGILPIQPALT(ph)PR ddPTM_A459_MK2206_30min_R1 2 AGQTQPNPGILPIQPALTPR 20 0 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 1 AGQTQPNPGILPIQPALT(1)PR;AGQTQPNPGILPIQPALT(1)PR 275.41 2.67E-59 47496000 3695.6 3719.3 3459.2 2849.2 3774.3 3573 4310.5 3920.5 2865.4 3068 TRUE FALSE 3381.269814 3477.172894 3224.399142 3068.645878 3623.961639 3775.300172 4022.95441 3886.223482 3163.268584 3448.087002 0.980621954 1.008435371 0.935126967 0.889956047 1.051006438 1.094897017 1.166720679 1.127066538 0.917398135 1 11.75158046 -6.426125347 6.265669297 1.075489724 0.956592887 0.34054406 0.070889832 0.262457561 14.20002686 0.02290729 0.025913671 3.75E-07 6.426125347 -0.118896837 AGQTQPNPGILPIQPALT(ph)PR ddPTM_A459_MK2206_30min_R2 4 AGQTQPNPGILPIQPALTPR 20 0 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 1 AGQTQPNPGILPIQPALT(1)PR;AGQTQPNPGILPIQPALT(1)PR;AGQTQPNPGILPIQPALT(1)PR;AGQTQPNPGILPIQPALT(1)PR 214.05 6.10E-17 58021100 111845 135770 116351 134026 139645 157374 148177 116505 128664 138647 TRUE FALSE 120407.9392 129027.8592 120230.0843 123075.6471 134161.8356 163362.9778 128721.1819 131732.6035 139854.9621 134122.9597 0.897742932 0.96201172 0.896416874 0.917632949 1.000289853 1.218009043 0.959725182 0.982177874 1.042736922 1 17.0331967 -6.368568073 4.576961643 1.041047948 0.920314446 0.41379469 0.068132689 0.240275177 8.170316277 0.022279624 0.025410415 4.28E-07 6.368568073 -0.120733502 AGS(ph)EECVFYTDETASPLAPDLAK ddPTM_A459_MK2206_30min_R1 3 AGSEECVFYTDETASPLAPDLAK 23 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 AGS(1)EECVFYTDETASPLAPDLAK;AGS(1)EECVFYTDETASPLAPDLAK;AGS(1)EECVFYTDETASPLAPDLAK 241.82 1.96E-37 19766000 12589.23 14362.13 15735.41 13265.38 10177.92 9022.33 11018.75 11869.02 11392.46 11838.76 TRUE FALSE 11518.44988 13427.15273 14667.33421 14287.08187 9772.511894 9533.166528 10283.70929 11765.25041 12576.74699 13305.43497 0.865695102 1.009147973 1.102356612 1.073777889 0.734475191 0.71648665 0.772895386 0.884243953 0.94523381 1 13.69972805 -6.254601729 24.97954361 0.826681547 1.018888384 0.394883931 0.102219426 536.7536984 1960886.255 0.032163575 0.040582422 5.56E-07 6.254601729 0.192206836 AGS(ph)EECVFYTDETASPLAPDLAK ddPTM_A459_MK2206_30min_R2 1 AGSEECVFYTDETASPLAPDLAK 23 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 AGS(1)EECVFYTDETASPLAPDLAK 77.984 0.0038833 0 6818.3 5962.8 6957 4972.4 6796.3 5264.5 8080.6 6448.6 5692.2 5893.2 TRUE FALSE 7340.31429 5666.696023 7188.942908 4566.139014 6529.443113 5464.844237 7019.607513 7291.454161 6187.297267 5700.905367 1.287569924 0.993999314 1.261017759 0.8009498 1.145334415 0.958592344 1.231314513 1.278999333 1.085318361 1 12.47697534 -7.281366635 24.76134963 1.172157988 1.070167802 0.045163964 0.152368152 1847.800517 2296042.12 0.060733667 0.041010571 5.23E-08 7.281366635 -0.101990186 AGS(ph)FTGTSDPEAAPAR ddPTM_A459_MK2206_30min_R1 2 AGSFTGTSDPEAAPAR 16 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 AGS(0.995)FT(0.004)GT(0.001)SDPEAAPAR;AGS(0.998)FT(0.001)GTSDPEAAPAR 143.93 0.00039053 4342700 2375.08 2518.09 2828.2 2131.18 2412 2495.2 3386.5 3200.6 3904 3532.3 TRUE FALSE 2173.066974 2354.161883 2636.229664 2295.323853 2315.924933 2636.476068 3160.592764 3172.617492 4309.834771 3969.907992 0.54738472 0.593001623 0.664053089 0.578180617 0.583369926 0.664115157 0.796137535 0.799166504 1.085625858 1 11.95488986 -7.751487779 1.087248588 1.041063741 0.594814478 0.906573186 0.054151692 0.139607737 0.298600643 0.045561164 0.018232326 1.77E-08 7.751487779 -0.446249263 AGS(ph)ISSEEVDGSQGNMMR ddPTM_A459_MK2206_30min_R2 1 AGSISSEEVDGSQGNMMR 18 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 AGS(0.706)IS(0.249)S(0.044)EEVDGSQGNMMR 229.69 8.37E-19 2576200 22803 27173 27274 26835 26386 24427 24963 24117 25680 26422 TRUE FALSE 24548.81521 25823.62833 28183.30155 24642.49466 25349.95306 25356.5866 21685.32811 27269.17471 27913.59998 25559.8523 0.96044433 1.010319936 1.102639452 0.964109431 0.991787932 0.992047462 0.848413671 1.066875285 1.092087687 1 14.64159188 AGS(ph)ISTLDSLDFAR ddPTM_A459_MK2206_30min_R1 4 AGSISTLDSLDFAR 14 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 AGS(0.954)IS(0.046)TLDSLDFAR;AGS(0.333)IS(0.333)T(0.333)LDSLDFAR;AGS(0.984)IS(0.011)T(0.006)LDSLDFAR;AGS(0.996)IS(0.004)TLDSLDFAR 342.58 1.68E-145 45331000 4870.83 3932.93 4532.26 3829.95 4252.02 4176.21 4440.78 4461.31 4248.06 3833.16 TRUE FALSE 4456.540331 3676.895542 4224.622819 4124.933413 4082.65304 4412.663401 4144.543669 4422.305237 4689.661039 4308.0408 1.034470317 0.853495989 0.980636678 0.957496367 0.947682074 1.024285425 0.962048379 1.026523527 1.088583246 1 12.0728162 -7.260390774 0.911410839 1.041778153 0.948506492 0.287615609 0.051057757 0.689960535 1.115234217 0.037616537 0.021817387 5.49E-08 7.260390774 -0.093271661 AGS(ph)ISTLDSLDFAR ddPTM_A459_MK2206_30min_R2 4 AGSISTLDSLDFAR 14 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 AGS(0.784)IS(0.088)T(0.127)LDS(0.001)LDFAR;AGS(0.799)IS(0.179)T(0.021)LDS(0.002)LDFAR;AGS(1)ISTLDSLDFAR;AGS(0.936)IS(0.055)T(0.008)LDSLDFAR 119.77 0.0021635 25217300 28612.1 29625.7 24070.5 28740.8 28704.4 30404.2 32855.6 25305.1 26903.2 28987.3 TRUE FALSE 30802.66437 28154.53082 24872.99846 26392.5847 27577.32103 31561.25314 28541.62025 28612.56346 29243.19171 28041.44677 1.098469156 1.004032746 0.887008386 0.941199108 0.983448581 1.125521568 1.017836936 1.020366876 1.042856025 1 14.77527317 -6.55772098 24.99948402 1.042606603 0.975488474 0.193520582 0.058942284 287.9383604 206595.4574 0.020481023 0.020481097 2.77E-07 6.55772098 -0.067118128 AGS(ph)PAPSNR ddPTM_A459_MK2206_30min_R2 1 AGSPAPSNR 9 0 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 AGS(0.999)PAPS(0.001)NR 101.3 0.017151 3763600 5416.3 1261.9 4411.7 3203.6 5593.4 5566.8 4396.3 36113 15149 8449.1 TRUE FALSE 5830.976092 1199.235881 4558.783876 2941.855632 5373.775011 5778.648475 3819.060529 40833.09309 16466.63264 8173.406559 0.713408302 0.14672412 0.55775812 0.359930172 0.657470661 0.707006122 0.467254443 4.995847545 2.014659679 1 12.99672178 -7.71430471 24.99589589 2.878942259 0.509902697 0.516040247 0.949696819 75.63246764 40108.39147 0.411466723 0.237559488 1.93E-08 7.71430471 -2.369039563 AGS(ph)PDVLR ddPTM_A459_MK2206_30min_R1 1 AGSPDVLR 8 0 Q8NDX6 Q8NDX6 ZNF740 Zinc finger protein 740 1 AGS(1)PDVLR 85.862 0.03468 32620000 2168.6 2420.6 2231.4 2511.1 2356.3 2302.1 2619.7 2281.3 1756 1706.7 TRUE FALSE 1984.149182 2263.0185 2079.938785 2704.505357 2262.443581 2432.442913 2444.944593 2261.354835 1938.542484 1918.138881 1.034413724 1.179799087 1.084352549 1.409963264 1.179499359 1.268126587 1.274644197 1.178931754 1.010637188 1 10.90549147 -8.237068594 4.042997437 0.998934926 1.20920216 0.391194521 0.09801789 0.214113437 7.808109485 0.082749833 0.025637636 5.79E-09 8.237068594 0.210267234 AGS(ph)PDVLR ddPTM_A459_MK2206_30min_R2 2 AGSPDVLR 8 0 Q8NDX6 Q8NDX6 ZNF740 Zinc finger protein 740 1 AGS(1)PDVLR;AGS(1)PDVLR 91.265 0.027107 24600000 99708 129750 141613 130491 106828 122556 148569 137128 125679 105586 TRUE FALSE 107341.7211 123306.8037 146334.3067 119829.4679 102633.396 127219.9545 129061.7118 155051.1004 136610.3322 102140.7375 1.050919778 1.207224529 1.432673293 1.173179976 1.00482333 1.245535891 1.263567456 1.518014303 1.337471567 1 16.64019886 -7.280956286 3.319526891 1.328073713 1.187033061 0.0547833 0.161495811 0.537427625 12.38869967 0.072105488 0.048974716 5.24E-08 7.280956286 -0.141040652 AGS(ph)PFSPPPSSSSLTGEAAISR ddPTM_A459_MK2206_30min_R1 2 AGSPFSPPPSSSSLTGEAAISR 22 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;C9J0X3;C9K0F0;C9J760;Q96JY6-2;A0A087WXJ0 Q96JY6;A0A087WXJ0 PDLIM2 PDZ and LIM domain protein 2 1 AGS(1)PFSPPPSSSSLTGEAAISR;AGS(0.996)PFS(0.004)PPPSSSSLTGEAAISR 201.14 1.81E-22 23452000 4923.3 6196.4 6983.9 5181.2 5339.7 5393.3 5906.5 6288.7 5651.9 5135.9 TRUE FALSE 4504.547482 5793.013234 6509.852326 5580.256922 5127.008442 5698.663985 5512.488162 6233.718559 6239.435231 5772.174066 0.780390097 1.003610281 1.127799032 0.966751324 0.888228315 0.98726475 0.955010729 1.079960252 1.080950636 1 12.49489909 -7.758055964 24.99541133 1.060341594 0.965416042 0.202552575 0.08547382 146.0386549 1078905.637 0.043636456 0.023882224 1.75E-08 7.758055964 -0.094925552 AGS(ph)PGEEQAHSCSTLSLLSEK ddPTM_A459_MK2206_30min_R2 1 AGSPGEEQAHSCSTLSLLSEK 21 0 Q9NZ71-9;A0A0C4DGC7;Q9NZ71-5;Q9NZ71-8;Q9NZ71-4;Q9NZ71;Q9NZ71-7;Q9NZ71-6;Q9NZ71-2 Q9NZ71-9 RTEL1 Regulator of telomere elongation helicase 1 1 AGS(0.999)PGEEQAHSCSTLSLLSEK 74.763 0.0020933 3395700 20440 25781 25222 31260 25750 22075 28058 24617 26241 28706 TRUE FALSE 22004.90212 24500.75303 26062.88889 28705.958 24738.92562 22915.07959 24373.9509 27834.52642 28523.39475 27769.32557 0.792417593 0.882295573 0.938549581 1.033729031 0.890872396 0.825193955 0.877729307 1.002347945 1.027154753 1 14.76120452 -7.789960519 8.038380897 1.011759616 0.895877256 0.43808729 0.061252657 0.236722638 54.55286558 0.036506475 0.01786539 1.62E-08 7.789960519 -0.11588236 AGS(ph)PINLSQHSLVIK ddPTM_A459_MK2206_30min_R1 2 AGSPINLSQHSLVIK 15 0 P48552 P48552 NRIP1 Nuclear receptor-interacting protein 1 1 AGS(1)PINLSQHSLVIK;AGS(1)PINLSQHSLVIK 103.75 0.0036035 16343900 6772.9 5483.1 6390.6 4487.3 8686.8 8125 7694.5 6828.2 4616.7 4330.6 TRUE FALSE 6196.829289 5126.149193 5956.823877 4832.912624 8340.786361 8585.030479 7181.213944 6768.501767 5096.622486 4867.107422 1.273205777 1.053222941 1.223894063 0.992974308 1.713705007 1.76388761 1.47545828 1.390662087 1.047156359 1 12.2488489 -6.245498087 24.98085986 1.440130816 1.13621488 0.20952698 0.241942203 1174.922947 1841166.793 0.073652481 0.094774759 5.68E-07 6.245498087 -0.303915936 AGS(ph)PINLSQHSLVIK ddPTM_A459_MK2206_30min_R2 2 AGSPINLSQHSLVIK 15 0 P48552 P48552 NRIP1 Nuclear receptor-interacting protein 1 1 AGS(0.964)PINLS(0.036)QHSLVIK;AGS(1)PINLSQHSLVIK 100.27 0.0050936 12635100 47052 80406 62110 92608 90709 94024 102280 68413 89066 61536 TRUE FALSE 50654.3373 76413.15496 64180.7164 85041.63016 87147.30888 97602.14921 88850.51314 77354.814 96812.79969 59528.08536 0.850931741 1.283648794 1.078158587 1.428596765 1.463969626 1.639598328 1.492581403 1.299467529 1.626338208 1 15.86128287 -4.613592746 0.802475505 1.447560771 0.460436255 0.409892708 0.194460172 2.989863202 1.231497234 0.070410232 2.80616245 2.43E-05 4.613592746 -0.987124516 AGS(ph)PLCNSNLQDSEEDIEPSYSLFR ddPTM_A459_MK2206_30min_R1 4 AGSPLCNSNLQDSEEDIEPSYSLFR 25 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 AGS(1)PLCNSNLQDSEEDIEPSYSLFR;AGS(1)PLCNSNLQDSEEDIEPSYSLFR;AGS(0.993)PLCNS(0.007)NLQDSEEDIEPSYSLFR;AGS(1)PLCNSNLQDSEEDIEPSYSLFR 310.48 1.04E-131 39994800 2577.37 2925.7 2912.47 2455.22 2461.86 2517.77 2745.57 2335.9 2141.56 2421.9 TRUE FALSE 2358.151147 2735.236398 2714.779651 2644.32147 2363.798903 2660.323962 2562.418035 2315.477473 2364.182826 2721.943256 0.866348386 1.004883695 0.997368202 0.971482952 0.868423285 0.977362021 0.941392892 0.850670736 0.868564332 1 11.41042128 -6.771406217 1.017934137 0.905654418 0.960642629 0.045913996 0.059281638 1.2096316 2.683295756 0.034311271 0.030877457 1.69E-07 6.771406217 0.054988211 AGS(ph)PLCNSNLQDSEEDIEPSYSLFR ddPTM_A459_MK2206_30min_R2 2 AGSPLCNSNLQDSEEDIEPSYSLFR 25 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 AGS(0.985)PLCNS(0.015)NLQDSEEDIEPSYSLFR;AGS(1)PLCNSNLQDSEEDIEPSYSLFR 189.11 9.42E-27 10911000 30341 35608 28907.9 37668 37716 25196.4 38349 25051.4 31167 34885 TRUE FALSE 32663.93029 33839.7585 29871.67496 34590.40391 36235.08033 26155.26666 33313.73023 28325.70399 33877.84932 33746.70531 0.967914645 1.002757401 0.885173076 1.025000918 1.073736829 0.775046524 0.987169856 0.839362057 1.003886128 1 15.04245904 -6.727991393 24.99986891 0.91518232 0.98759324 0.154267707 0.080968266 346.9808816 259341.4116 0.02562624 0.0256248 1.87E-07 6.727991393 0.072410919 AGS(ph)PNTPPPR ddPTM_A459_MK2206_30min_R2 2 AGSPNTPPPR 10 0 Q1RMZ1 Q1RMZ1 C7orf60 Probable methyltransferase BTM2 homolog 1 AGS(0.971)PNT(0.029)PPPR;AGS(0.996)PNT(0.004)PPPR 110.93 0.0091576 16795700 81814 107558 99934 111767 93563 89648 105523 105093 93897 93304 TRUE FALSE 88077.74274 102216.8261 103265.7497 102635.2786 89889.2465 93059.61746 91667.70334 118829.0159 102063.9913 90259.49812 0.975827969 1.132477227 1.144098425 1.137113331 0.995897921 1.031022988 1.01560174 1.316526442 1.130783945 1 16.46179114 AGS(ph)PSRDVGPSLGLK ddPTM_A459_MK2206_30min_R1 2 AGSPSRDVGPSLGLK 15 1 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 AGS(0.988)PS(0.012)RDVGPS(0.001)LGLK;AGS(0.996)PS(0.004)RDVGPSLGLK 191.36 0.00013567 80516000 8928.3 8707.6 9854.9 11013.4 10607.3 7654.5 7890.6 11604.7 5406.9 3061.04 TRUE FALSE 8168.901201 8140.733657 9185.976845 11861.65398 10184.78878 8087.891175 7364.232471 11503.24133 5968.966604 3440.264745 2.374497839 2.366310229 2.670136611 3.447889874 2.960466573 2.350950225 2.140600511 3.343708169 1.735031181 1 11.74830388 -8.499354552 5.231484621 1.001944814 2.693089041 0.648126151 0.412436964 0.097326132 8.434501066 0.417362267 0.108464383 3.17E-09 8.499354552 1.691144227 AGS(ph)PSRDVGPSLGLK ddPTM_A459_MK2206_30min_R2 2 AGSPSRDVGPSLGLK 15 1 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 AGS(0.896)PS(0.104)RDVGPSLGLK;AGS(0.912)PS(0.088)RDVGPSLGLK 135.55 0.0019428 22944000 21390.1 50808 46185 54454 72249 54223 49915 35937 62405 36467 TRUE FALSE 23027.7425 48284.9486 47724.78485 50004.93401 69412.14124 56286.49426 43361.10054 40634.08929 67832.8741 35277.08478 0.652767729 1.368734092 1.352855123 1.417490542 1.967626908 1.595554015 1.229157704 1.15185508 1.922859401 1 15.10644372 -4.573211953 1.94778407 1.476806871 5.78E-12 0.394292445 0.294801227 1.660501572 4.13212647 0.079227289 5.350192936 2.67E-05 4.573211953 -1.476806871 AGS(ph)SPAQGAQNEPPR ddPTM_A459_MK2206_30min_R1 1 AGSSPAQGAQNEPPR 15 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 AGS(0.5)S(0.5)PAQGAQNEPPR 191.51 2.88E-05 3896800 1641.1 1596.1 1693.7 1307.6 1809.1 1669.6 1858.6 1588.8 1234.4 1178.1 TRUE FALSE 1501.515827 1492.1936 1578.736363 1408.311579 1737.039716 1764.131309 1734.616185 1574.909289 1362.720297 1324.051922 1.134030926 1.126990245 1.192352306 1.063637728 1.311912084 1.33237321 1.310081694 1.18946188 1.029204576 1 10.37074398 -8.267510296 4.046474647 1.005044826 1.211823235 0.462697799 0.083632234 0.209702902 7.898170255 0.082285196 0.024097886 5.40E-09 8.267510296 0.206778409 AGS(ph)SPAQGAQNEPPR ddPTM_A459_MK2206_30min_R2 1 AGSSPAQGAQNEPPR 15 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 AGS(0.913)S(0.087)PAQGAQNEPPR 127.07 0.0010882 5824100 7321.7 9225.9 7898.1 10382 9737.4 10226 10644 8045.3 8408.1 8273 TRUE FALSE 7882.254981 8767.755222 8161.418712 9533.75739 9355.060749 10615.1576 9246.430014 9096.848334 9139.42134 8003.052688 0.984906046 1.095551356 1.019788202 1.191265104 1.168936544 1.326388568 1.155362882 1.136672304 1.141991899 1 12.96633469 -5.761819883 24.9999972 1.172883851 1.039628797 0.340240601 0.079305814 10.64692371 699613.9599 0.021706121 0.034571552 1.73E-06 5.761819883 -0.133255053 AGS(ph)SSPEPWARPSCTPQEGGCPRPK ddPTM_A459_MK2206_30min_R2 1 AGSSSPEPWARPSCTPQEGGCPRPK 25 2 Q86VE0 Q86VE0 MYPOP "Myb-related transcription factor, partner of profilin" 1 AGS(0.361)S(0.313)S(0.313)PEPWARPS(0.009)CT(0.004)PQEGGCPRPK 46.971 0.021944 4550100 7281.8 8331.7 7532.1 8301.1 7392.9 7690.7 7710.2 7593.8 6985.6 6821.9 TRUE FALSE 7839.300207 7917.959893 7783.216455 7622.873576 7102.6176 7983.374978 6697.841478 8586.335733 7593.194861 6599.301962 1.187898395 1.19981779 1.179399958 1.155103012 1.076268012 1.209730214 1.014931809 1.301097568 1.150605762 1 12.68809772 -10.78514616 2.785598026 0.998560956 1.163556062 0.312554906 0.072907986 9100525.137 11081100.09 111228.2523 0.018116799 1.64E-11 10.78514616 0.164995106 AGSALPGFANS(ph)PAGSTSVVLVPPAHGTLVPDGNK ddPTM_A459_MK2206_30min_R2 1 AGSALPGFANSPAGSTSVVLVPPAHGTLVPDGNK 34 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 AGS(0.02)ALPGFANS(0.439)PAGS(0.202)T(0.164)S(0.164)VVLVPPAHGT(0.011)LVPDGNK 42.823 0.021926 8583200 14803 18471 13377 21584 20337 19896 25894 19662 18781 17356 TRUE FALSE 15936.32906 17553.757 13822.9825 19820.51816 19538.46719 20653.15622 22494.0867 22231.89091 20414.53743 16789.67514 0.949174354 1.045509032 0.823302559 1.180518264 1.163719192 1.230110532 1.339757113 1.324140623 1.215898298 1 14.0352867 -5.888570968 6.037539207 1.230135545 0.95135222 0.589214054 0.102046311 0.138886469 6.84485083 0.028773044 0.043166661 1.29E-06 5.888570968 -0.278783324 AGSALPGFANSPAGS(ph)TSVVLVPPAHGTLVPDGNK ddPTM_A459_MK2206_30min_R2 1 AGSALPGFANSPAGSTSVVLVPPAHGTLVPDGNK 34 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 AGS(0.005)ALPGFANS(0.232)PAGS(0.3)T(0.232)S(0.232)VVLVPPAHGTLVPDGNK 49.912 0.0064014 8093700 15081 24136 20886 26642 23908 24413 29414 16901 22757 18335 TRUE FALSE 16235.61296 22937.44134 21582.32882 24465.26338 22969.25179 25342.05382 25551.90647 19110.01873 24736.36272 17736.73045 0.91536673 1.293217 1.216815516 1.379355876 1.295010479 1.428789477 1.440621006 1.077426236 1.394640506 1 14.11445247 -4.761401321 10.37234547 1.294318393 0.914094846 0.376067374 0.140162603 0.070192131 190.4897176 0.033014801 0.18640299 1.73E-05 4.761401321 -0.380223548 AGSATVLSGS(ph)IAGLEGGSQLALR ddPTM_A459_MK2206_30min_R1 3 AGSATVLSGSIAGLEGGSQLALR 23 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 AGSAT(0.001)VLS(0.001)GS(0.998)IAGLEGGSQLALR;AGSATVLS(0.004)GS(0.992)IAGLEGGS(0.004)QLALR;AGSATVLS(0.131)GS(0.868)IAGLEGGS(0.001)QLALR 256.4 2.05E-47 30377000 4206.83 4575.43 3784.43 3582.98 4715.7 4772.21 4140.14 4153.86 3888.26 3527.58 TRUE FALSE 3849.017018 4277.568675 3527.553436 3858.94174 4527.863683 5042.408406 3863.958815 4117.54324 4292.458541 3964.603242 0.97084545 1.078939913 0.889762032 0.973348783 1.142072335 1.271857005 0.97461425 1.038576369 1.082695614 1 11.95296078 -6.245718745 23.96339771 1.090724716 0.979099302 0.258186248 0.088313368 694.0380548 1057939.174 0.027424374 0.035264503 5.68E-07 6.245718745 -0.111625414 AGSCCLS(ph)PGGR ddPTM_A459_MK2206_30min_R1 1 AGSCCLSPGGR 11 0 W0Z7M9;A0A499FIJ6;A0A494BZX7;B0QY83;Q969V6;E7ER32;A0A087X287;A0A087WU73 W0Z7M9 mkl1;MKL1 MKL/myocardin-like protein 1 1 AGSCCLS(1)PGGR 116.03 0.0060073 20959000 2721.5 2545.3 2450.9 2054.7 2574.9 1827.4 2111.8 1978.4 1714.8 1495 TRUE FALSE 2490.022134 2379.600507 2284.539737 2212.95335 2472.336281 1930.865809 1970.925675 1961.103057 1893.059596 1680.211887 1.481969122 1.416250252 1.359673595 1.317068024 1.471443156 1.149179948 1.1730221 1.167176041 1.126679088 1 10.71442746 -7.042031695 0.373987535 0.996072183 1.503016948 0.821033173 0.06622117 0.614544061 0.1951089 0.077675757 0.114386162 9.08E-08 7.042031695 0.506944765 AGSIS(ph)PGSPPYPQSR ddPTM_A459_MK2206_30min_R1 1 AGSISPGSPPYPQSR 15 0 Q63HR2-6;Q63HR2;Q63HR2-4;Q63HR2-5 Q63HR2-6 TNS2 Tensin-2 1 AGS(0.044)IS(0.859)PGS(0.097)PPYPQSR 101.72 0.010421 0 1062.2 955.49 1060.1 905.94 1250.1 1015.7 1257.1 1068.7 895.58 800.56 TRUE FALSE 971.8543122 893.2874273 988.1433656 975.7156558 1200.30587 1073.208056 1173.241153 1059.356469 988.6787459 899.7394167 1.080150868 0.992829047 1.098255058 1.084442493 1.334059448 1.192798755 1.303978831 1.177403645 1.098850098 1 9.813363417 -6.027047203 23.41428922 1.200634371 1.057435888 0.282646154 0.092765188 359.7823879 311457.3052 0.026640762 0.034521085 9.40E-07 6.027047203 -0.143198483 AGSISPGS(ph)PPYPQSR ddPTM_A459_MK2206_30min_R1 1 AGSISPGSPPYPQSR 15 0 Q63HR2-6;Q63HR2;Q63HR2-4;Q63HR2-5 Q63HR2-6 TNS2 Tensin-2 1 AGS(0.002)IS(0.234)PGS(0.763)PPYPQS(0.001)R 127.05 0.0010901 7465300 924.73 996.68 985.22 758.16 1057.6 1045.6 852.31 972.76 694.39 717.73 TRUE FALSE 846.0768575 931.7959508 918.3460114 816.5536146 1015.473552 1104.800968 795.453955 964.2552619 766.5743254 806.647811 1.048880126 1.155145949 1.13847208 1.012280209 1.258880937 1.369619992 0.986122995 1.195385705 0.950320964 1 9.655795108 -8.266266019 24.61677003 0.975160453 1.147162872 0.280021131 0.109294777 462.4379585 2358465.534 0.095614553 0.027879632 5.42E-09 8.266266019 0.172002419 AGSLPNY(ph)ATINGK ddPTM_A459_MK2206_30min_R2 1 AGSLPNYATINGK 13 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 AGS(0.006)LPNY(0.988)AT(0.006)INGK 134.13 0.012719 0 13808 15321 14572 14606 15403 11912 14883 10999 13872 13590 TRUE FALSE 14865.1511 14560.18142 15057.82321 13412.64308 14798.20083 12365.31951 12928.84422 12436.60707 15078.56149 13146.55941 1.130725586 1.107527906 1.145381292 1.020239795 1.125632978 0.940574573 0.983439379 0.945997099 1.14695876 1 13.68239766 -6.222883891 1.290959657 1.004239803 1.123659627 0.335663677 0.065426948 0.492024082 1.665953217 0.025182416 0.037324999 5.99E-07 6.222883891 0.119419824 AGSLQLSSMSAGNS(ph)SLRR ddPTM_A459_MK2206_30min_R2 2 AGSLQLSSMSAGNSSLRR 18 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 AGSLQLSSMS(0.007)AGNS(0.824)S(0.169)LRR;AGSLQLSSMS(0.001)AGNS(0.5)S(0.5)LRR 83.359 0.0045315 10372900 42437 63388 55182 60530 64732 56965 46988 42837 62318 49422 TRUE FALSE 45686.00935 60240.24409 57021.74034 55584.50537 62190.29643 59132.84299 40818.41916 48435.94298 67738.30699 47809.36419 0.955587051 1.260009312 1.192689786 1.162627998 1.300797396 1.236846463 0.853774566 1.013105776 1.416841829 1 15.5450056 AGSNEDPILAPS(ph)GTPPPTIPPDETFGGR ddPTM_A459_MK2206_30min_R2 3 AGSNEDPILAPSGTPPPTIPPDETFGGR 28 0 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 "Proline-, glutamic acid- and leucine-rich protein 1" 1 AGSNEDPILAPS(0.527)GT(0.473)PPPTIPPDETFGGR;AGSNEDPILAPS(0.524)GT(0.475)PPPTIPPDETFGGR;AGS(0.001)NEDPILAPS(0.485)GT(0.485)PPPT(0.026)IPPDET(0.002)FGGR 73.603 0.00010707 38884000 125232 159259 124992 147097 156643 164510 167835 115295 137082 154154 TRUE FALSE 134819.8582 151350.4296 129159.1709 135078.7046 150492.4088 170770.5433 145798.0629 130364.4524 149005.1446 149123.9676 0.904079072 1.014930276 0.866119464 0.905814851 1.009176534 1.14515826 0.977697048 0.874201877 0.999203193 1 17.18615262 -6.266604958 24.60333424 1.000668399 0.925277194 0.227040687 0.0705969 613.0024331 2919688.757 0.023640126 0.027601136 5.41E-07 6.266604958 -0.075391205 AGSNEDPILAPSGT(ph)PPPTIPPDETFGGR ddPTM_A459_MK2206_30min_R1 5 AGSNEDPILAPSGTPPPTIPPDETFGGR 28 0 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 "Proline-, glutamic acid- and leucine-rich protein 1" 1 AGSNEDPILAPS(0.01)GT(0.99)PPPTIPPDETFGGR;AGSNEDPILAPS(0.054)GT(0.946)PPPTIPPDETFGGR;AGSNEDPILAPS(0.005)GT(0.995)PPPTIPPDETFGGR;AGSNEDPILAPS(0.292)GT(0.708)PPPTIPPDETFGGR;AGSNEDPILAPS(0.056)GT(0.944)PPPTIPPDETFGGR 187.33 2.94E-32 107445500 16677.6 16650.05 16453.53 13578.91 17463.43 15228.94 17381.9 15316.82 14010.48 14237.45 TRUE FALSE 15259.08254 15566.12872 15336.71023 14624.76 16767.8246 16091.18942 16222.38517 15182.90666 15466.91953 16001.29279 0.953615607 0.972804443 0.958466945 0.913973651 1.047904367 1.005618085 1.013817157 0.948854999 0.96660437 1 13.96590085 -6.249884996 24.9764514 0.995834361 0.951989527 0.397510518 0.028517125 905.0699397 1956437.242 0.009098721 0.011646704 5.62E-07 6.249884996 -0.043844833 AGSNEDPILAPSGT(ph)PPPTIPPDETFGGR ddPTM_A459_MK2206_30min_R2 2 AGSNEDPILAPSGTPPPTIPPDETFGGR 28 0 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 "Proline-, glutamic acid- and leucine-rich protein 1" 1 AGSNEDPILAPS(0.017)GT(0.983)PPPTIPPDETFGGR;AGSNEDPILAPS(0.01)GT(0.99)PPPTIPPDETFGGR 128.82 4.41E-12 31778000 97682 119591 121473 136755 129121 139033 139691 100797 110085 128991 TRUE FALSE 105160.609 113652.2848 125522.8492 125581.679 124051.0608 144323.9982 121349.4039 113971.514 119659.9943 124782.0342 0.842754405 0.910806476 1.005936872 1.006408333 0.994141997 1.156608795 0.972490989 0.91336477 0.958952104 1 16.92905071 -5.035780826 2.403444474 1.002912806 0.838935117 0.434613922 0.059003588 0.360948917 3.598007944 0.017281751 0.097909651 9.21E-06 5.035780826 -0.163977689 AGSNMLLIGVHGPTT(ph)PCEEVSMK ddPTM_A459_MK2206_30min_R2 2 AGSNMLLIGVHGPTTPCEEVSMK 23 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 AGSNMLLIGVHGPT(0.079)T(0.919)PCEEVS(0.002)MK;AGSNMLLIGVHGPT(0.051)T(0.949)PCEEVSMK 114.49 1.50E-05 14644600 69135 125105 88037 96099 98400 68931 96992 70238 88270 85547 TRUE FALSE 74428.02876 118892.4676 90972.10964 88247.40429 94536.32158 71554.21751 84256.83389 79418.34776 95947.56504 82755.6084 0.899371417 1.43666961 1.099286337 1.066361616 1.142355466 0.864644933 1.018140468 0.9596733 1.159408612 1 16.33656947 -6.133566745 1.549580021 1.00623002 1.170747696 0.127102334 0.144528461 0.665457145 3.194052982 0.04960475 0.075483664 7.35E-07 6.133566745 0.164517676 AGSPS(ph)RDVGPSLGLK ddPTM_A459_MK2206_30min_R2 1 AGSPSRDVGPSLGLK 15 1 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 AGS(0.36)PS(0.64)RDVGPSLGLK 75.02 0.021707 14231000 18493 46667 41046 44865 54610 42256 46275 28952 54810 38947 TRUE FALSE 19908.8383 44349.58464 42414.45315 41199.38598 52465.73701 43864.08169 40199.03691 32736.12581 59577.27473 37676.16258 0.528420012 1.177125843 1.125763619 1.093513329 1.392544607 1.164239633 1.066962083 0.868881637 1.581298908 1 15.20136441 -4.760498887 24.91334101 1.160090473 0.528419237 0.504361842 0.188805245 18.09693791 479117.6113 0.044886179 0.264959844 1.74E-05 4.760498887 -0.631671235 AGSRPQS(ph)PSGDADAR ddPTM_A459_MK2206_30min_R1 1 AGSRPQSPSGDADAR 15 1 O94819 O94819 KBTBD11 Kelch repeat and BTB domain-containing protein 11 1 AGS(0.014)RPQS(0.977)PS(0.008)GDADAR 124.04 0.0065121 1535000 381.66 414.65 406.98 282.9 643.08 528.38 515.22 414.03 367.29 532.99 TRUE FALSE 349.1978128 387.6562096 379.3553315 304.689007 617.4647619 558.296419 480.8506139 410.4101794 405.4711099 599.0208251 0.582947701 0.647149804 0.633292393 0.508645099 1.030790143 0.932015041 0.802727708 0.685135077 0.676889839 1 9.226462349 -6.246127686 24.99540534 0.840127571 0.599753367 0.547799497 0.115921169 749.2682593 1223134.625 0.037127937 0.047750464 5.67E-07 6.246127686 -0.240374204 AGSRPQS(ph)PSGDADAR ddPTM_A459_MK2206_30min_R2 2 AGSRPQSPSGDADAR 15 1 O94819 O94819 KBTBD11 Kelch repeat and BTB domain-containing protein 11 1 AGS(0.001)RPQS(0.901)PS(0.099)GDADAR;AGSRPQS(0.932)PS(0.067)GDADAR 107.51 0.02906 3534800 9370.2 13653.5 9336.4 12649.5 12079.1 14784.9 12084.5 10278.1 13965.8 13116.3 TRUE FALSE 10087.58972 12975.48704 9647.670916 11615.99539 11604.81384 15347.54973 10497.79063 11621.48296 15180.52004 12688.31621 0.795029817 1.022632699 0.760358645 0.91548754 0.914606292 1.209581278 0.827358844 0.91592003 1.196417223 1 13.63121301 -6.542250983 24.98908988 1.017516598 0.880850642 0.25823369 0.126042985 380.6591033 491025.3778 0.040917945 0.04092288 2.87E-07 6.542250983 -0.136665956 AGSS(ph)PAQGAQNEPPR ddPTM_A459_MK2206_30min_R1 2 AGSSPAQGAQNEPPR 15 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 AGS(0.077)S(0.923)PAQGAQNEPPR;AGS(0.049)S(0.951)PAQGAQNEPPR 146.1 0.00036596 3941400 4392.6 3098.1 3393.49 2701.46 5222.7 6439.7 5357.7 3829.2 3203.2 2707.88 TRUE FALSE 4018.986304 2896.413127 3163.149354 2909.526917 5014.6688 6804.310249 5000.297609 3795.721708 3536.184103 3043.352618 1.320578588 0.951717888 1.03936341 0.956026883 1.647744915 2.235794239 1.643022757 1.247217193 1.16193703 1 11.57144579 -6.261411842 24.9999452 1.546659136 1.056724391 0.266652202 0.334964343 3.24587862 2946372.454 0.108980918 0.131753306 5.48E-07 6.261411842 -0.489934746 AGSS(ph)PAQGAQNEPPR ddPTM_A459_MK2206_30min_R2 5 AGSSPAQGAQNEPPR 15 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 AGS(0.061)S(0.939)PAQGAQNEPPR;AGS(0.05)S(0.95)PAQGAQNEPPR;AGS(0.022)S(0.978)PAQGAQNEPPR;AGS(0.153)S(0.847)PAQGAQNEPPR;AGS(0.171)S(0.829)PAQGAQNEPPR 139 0.00044484 6134900 45753.4 68317 47165.1 70121.3 70438 98328.8 66468.4 52412.7 66761 66271.5 TRUE FALSE 49256.31548 64924.47712 48737.56089 64392.16548 67672.2502 102070.7714 57741.01924 59263.21985 72567.7511 64109.06638 0.768320586 1.012719117 0.760228836 1.004415898 1.05558003 1.592142534 0.90066854 0.924412461 1.131942098 1 15.96824078 -6.034014213 3.333994674 1.109732703 0.8639207 0.253837207 0.192339182 0.371463586 8.452043144 0.060439464 0.086108453 9.25E-07 6.034014213 -0.245812003 AGSS(ph)SPEPWARPSCTPQEGGCPRPK ddPTM_A459_MK2206_30min_R2 1 AGSSSPEPWARPSCTPQEGGCPRPK 25 2 Q86VE0 Q86VE0 MYPOP "Myb-related transcription factor, partner of profilin" 1 AGS(0.13)S(0.434)S(0.434)PEPWARPS(0.002)CT(0.001)PQEGGCPRPK 45.423 0.025561 5384600 6963.5 15472 10909 13897 11479 10636 13239 10152 11653 12453 TRUE FALSE 7496.630914 14703.68298 11272.70062 12761.57065 11028.27678 11040.76043 11500.7034 11478.90126 12666.55688 12046.65963 0.622299554 1.220561004 0.935753226 1.059345166 0.915463466 0.916499741 0.954679866 0.952870058 1.05145802 1 13.55634554 -4.736429982 24.99992276 0.992328207 0.622297845 0.621921405 0.088300585 1635.199821 1634495.708 0.021383036 1.525361799 1.83E-05 4.736429982 -0.370030362 AGSS(ph)TPGDAPPAVAEVQGR ddPTM_A459_MK2206_30min_R1 1 AGSSTPGDAPPAVAEVQGR 19 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AGS(0.012)S(0.987)T(0.001)PGDAPPAVAEVQGR 206.81 2.45E-16 40441000 1154.9 1100.6 1060.3 826.2 1151.8 744.22 1016.3 1031.5 794.03 1152.8 TRUE FALSE 1056.66969 1028.95074 988.3297902 889.8340672 1105.921367 786.3570933 948.5044813 1022.481704 876.57226 1295.617567 0.815572216 0.794177824 0.762825247 0.686803027 0.85358627 0.606936115 0.732086771 0.789184811 0.676567131 1 10.33942422 -11.04092619 5.845872738 1.00038606 0.746435832 0.542838207 0.069814193 0.000342914 2.83E-05 0.065988064 0.01598056 9.10E-12 11.04092619 -0.253950227 AGSS(ph)TPGDAPPAVAEVQGR ddPTM_A459_MK2206_30min_R2 1 AGSSTPGDAPPAVAEVQGR 19 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AGS(0.007)S(0.917)T(0.076)PGDAPPAVAEVQGR 294.94 5.97E-86 34370000 33483 36874 35560 44321 37453 42729 39239 28988 33870 37319 TRUE FALSE 36046.48422 35042.89078 36745.55265 40699.83252 35982.40703 44355.08204 34086.87217 32776.83113 36815.95138 36101.28409 0.998482052 0.970682669 1.01784614 1.127379082 0.996707124 1.22862893 0.944201101 0.907913166 1.019796174 1 15.13976253 AGSSPCLGSSSAASS(ph)PPPPASR ddPTM_A459_MK2206_30min_R1 2 AGSSPCLGSSSAASSPPPPASR 22 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 AGSSPCLGSS(0.001)S(0.001)AAS(0.102)S(0.887)PPPPAS(0.009)R;AGSSPCLGSSSAAS(0.012)S(0.988)PPPPASR 265.42 9.07E-55 18743300 2758.73 2808.19 3111.95 2554.74 3479.84 3381.18 3712.4 3339.9 2258.98 2897.55 TRUE FALSE 2524.085527 2625.376321 2900.719504 2751.506517 3341.230604 3572.61949 3464.75257 3310.699606 2493.809055 3256.520369 0.775086669 0.806190665 0.890742012 0.84492225 1.0260125 1.097066526 1.063943159 1.016637156 0.765789484 1 11.66911554 -6.23003118 6.56881364 1.004357397 0.831087795 0.458492332 0.087852542 0.19193145 28.49108734 0.027600915 0.035107299 5.89E-07 6.23003118 -0.173269602 AGSSPCLGSSSAASS(ph)PPPPASR ddPTM_A459_MK2206_30min_R2 2 AGSSPCLGSSSAASSPPPPASR 22 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 AGSSPCLGSSSAAS(0.052)S(0.948)PPPPASR;AGSSPCLGSSSAAS(0.093)S(0.906)PPPPASR 294.28 1.57E-92 15491300 33744 46463 39103 47616 62512 62834 70032 43886 59541 55783 TRUE FALSE 36327.46658 44155.71498 40406.6745 43725.62048 60057.46478 65225.1919 60836.71428 49622.05088 64719.76855 53962.80528 0.673194553 0.818262037 0.748787508 0.810291835 1.112941858 1.20870647 1.127382351 0.919560253 1.199340327 1 15.71967773 -6.20698352 4.35072797 1.098732573 0.758898343 0.776006409 0.087667725 0.103894829 4.16904948 0.026798207 0.034468699 6.21E-07 6.20698352 -0.33983423 AGSST(ph)PGDAPPAVAEVQGR ddPTM_A459_MK2206_30min_R1 4 AGSSTPGDAPPAVAEVQGR 19 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AGS(0.022)S(0.005)T(0.974)PGDAPPAVAEVQGR;AGS(0.001)S(0.004)T(0.995)PGDAPPAVAEVQGR;AGS(0.001)S(0.073)T(0.926)PGDAPPAVAEVQGR;AGS(0.009)S(0.086)T(0.905)PGDAPPAVAEVQGR 314.11 9.43E-117 68271000 11956 9772.9 10631 9924.9 12617.1 10466.7 11967 11094.1 9674.5 8555.3 TRUE FALSE 10939.07942 9136.682434 9909.39734 10689.31752 12114.53419 11059.31551 11168.70327 10997.10545 10680.1989 9615.195153 1.137686676 0.950233697 1.03059763 1.111710927 1.259936382 1.150191476 1.161568027 1.143721503 1.110762572 1 13.23110042 -5.861098045 4.357102658 1.149542449 1.030640404 0.248495649 0.073763787 0.237832923 8.00785103 0.020336386 0.031400584 1.38E-06 5.861098045 -0.118902044 AGSST(ph)PGDAPPAVAEVQGR ddPTM_A459_MK2206_30min_R2 3 AGSSTPGDAPPAVAEVQGR 19 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AGS(0.002)S(0.008)T(0.99)PGDAPPAVAEVQGR;AGS(0.002)S(0.013)T(0.985)PGDAPPAVAEVQGR;AGS(0.021)S(0.111)T(0.867)PGDAPPAVAEVQGR 134.08 0.00049984 75332000 87054 101813 93599 105144 105226 114659 117717 76584 97782 99310 TRUE FALSE 93718.92117 96757.11447 96719.54394 96553.39886 101094.2985 119022.4286 102260.6165 86593.79175 106286.9016 96069.52283 0.975532285 1.00715723 1.006766153 1.005036728 1.052303535 1.238919744 1.064443889 0.901365898 1.106354008 1 16.5517912 -6.281093095 5.15287955 1.065161602 0.999438738 0.12578557 0.079844604 0.432642034 35.26580179 0.026528516 0.031496035 5.23E-07 6.281093095 -0.065722865 AGT(ph)DSPVSCASVTEER ddPTM_A459_MK2206_30min_R2 1 AGTDSPVSCASVTEER 16 0 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 AGT(0.548)DS(0.451)PVSCASVTEER 252.12 3.38E-29 28888000 18036 23429 14586 24268 25861 19454 24327 16453 17384 17235 TRUE FALSE 19416.85003 22265.54993 15072.28996 22285.22677 24845.5672 20194.3356 21132.83568 18603.46359 18896.0289 16672.62336 1.164594774 1.335455702 0.904014301 1.33663589 1.490201431 1.211227241 1.267517128 1.115809023 1.13335667 1 14.0251935 -8.26810076 1.301013125 1.013968698 1.246165055 0.216370889 0.144414345 0.684522584 2.285628059 0.140471492 0.044438312 5.39E-09 8.26810076 0.232196357 AGT(ph)EDEEEEEEGRR ddPTM_A459_MK2206_30min_R1 2 AGTEDEEEEEEGRR 14 1 F8WBH7;O95456-2;O95456 F8WBH7 PSMG1 Proteasome assembly chaperone 1 1 AGT(1)EDEEEEEEGRR;AGT(1)EDEEEEEEGRR 164.15 0.00032794 18212700 3373.5 4718.7 4300.9 3177.3 2946.7 2806.1 3592.6 3087.4 4438.2 3911.4 TRUE FALSE 3086.56611 4411.511772 4008.966891 3422.016197 2829.326699 2964.978957 3352.944209 3060.407187 4899.566772 4395.973762 0.702134789 1.0035346 0.911963335 0.778443272 0.64361774 0.674476036 0.762730715 0.696184134 1.114557784 1 12.10196706 -8.26429257 24.99465973 1.05727892 0.776467317 0.527656821 0.108025474 227.2897609 1991057.942 0.099403339 0.030097403 5.44E-09 8.26429257 -0.280811603 AGT(ph)EDEEEEEEGRR ddPTM_A459_MK2206_30min_R2 2 AGTEDEEEEEEGRR 14 1 F8WBH7;O95456-2;O95456 F8WBH7 PSMG1 Proteasome assembly chaperone 1 1 AGT(1)EDEEEEEEGRR;AGT(1)EDEEEEEEGRR 87.99 0.026656 13366800 12583.1 11311.3 11376.5 10075.9 10677.9 9841.3 13472.4 9242.4 6980.4 11688.9 TRUE FALSE 13546.47181 10749.59729 11755.78683 9252.666739 10258.63199 10215.81757 11703.4577 10450.41341 7587.542574 11307.49215 1.198008509 0.950661486 1.03964581 0.818277529 0.907242018 0.903455641 1.035017981 0.92420258 0.671019044 1 13.46499137 -1.522886219 0.906205973 0.902318019 151.3975192 0.417275793 0.102085195 976.5765214 2.087199146 0.034080095 304036.2402 0.029999484 1.522886219 150.4952012 AGT(ph)GYASPDRTHVLAAGK ddPTM_A459_MK2206_30min_R1 2 AGTGYASPDRTHVLAAGK 18 1 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 AGT(0.936)GY(0.006)AS(0.058)PDRTHVLAAGK;AGT(0.93)GY(0.018)AS(0.051)PDRT(0.001)HVLAAGK 90.765 0.0077839 101647000 5436.5 5077.7 5366.1 4841.2 5619.5 5980.6 6142.8 5818.5 4724.5 4208.3 TRUE FALSE 4974.097127 4747.140807 5001.864083 5214.070063 5395.663416 6319.216404 5733.02502 5767.629468 5215.628682 4729.655975 1.051682649 1.003696851 1.057553469 1.102420576 1.140815198 1.336083731 1.212144192 1.219460675 1.102750117 1 12.20751953 -6.070729493 2.037574263 1.191435305 1.032771224 0.319014642 0.083562266 0.331495948 2.73244485 0.026982444 0.040397378 8.50E-07 6.070729493 -0.158664081 AGT(ph)GYASPDRTHVLAAGK ddPTM_A459_MK2206_30min_R2 1 AGTGYASPDRTHVLAAGK 18 1 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 AGT(0.543)GY(0.005)AS(0.451)PDRT(0.001)HVLAAGK 66.76 0.042647 18085000 49157 59308 65442 64657 70241 56855 71902 53214 52124 64331 TRUE FALSE 52920.49772 56362.85096 67623.80362 59374.31627 67482.98541 59018.65687 62461.18103 60169.25251 56657.6513 62231.88474 0.850375944 0.905690888 1.086642384 0.954081923 1.084379586 0.948366856 1.003684547 0.9668557 0.910428015 1 15.92536632 -5.035957738 8.802614559 0.9938478 0.86380277 0.446695507 0.05334843 0.261038346 62.51198576 0.013147181 0.036265657 9.21E-06 5.035957738 -0.13004503 AGT(ph)PVSELTK ddPTM_A459_MK2206_30min_R1 1 AGTPVSELTK 10 0 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 AGT(1)PVSELTK 125.97 0.0082686 39534000 5383.9 6748.3 7530.3 5628.7 3682.5 3320.4 5084.6 4857.2 6698.4 6968.3 TRUE FALSE 4925.971033 6308.984443 7019.164217 6062.223449 3535.818227 3508.398179 4745.415611 4814.734012 7394.72265 7831.585612 0.628987701 0.805582005 0.896263485 0.774073572 0.451481782 0.447980569 0.605932929 0.614784062 0.944217814 1 12.93508872 -8.316236919 5.146739568 0.987174529 0.655124224 0.468477164 0.136073592 0.226133205 12.76307559 0.148266535 0.039741745 4.83E-09 8.316236919 -0.332050305 AGT(ph)PVSELTK ddPTM_A459_MK2206_30min_R2 4 AGTPVSELTK 10 0 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 AGT(0.999)PVS(0.001)ELTK;AGT(1)PVSELTK;AGT(0.999)PVS(0.001)ELTK;AGT(1)PVSELTK 144.7 0.0022266 107888000 965850 727530 892290 646970 660620 446620 928880 655720 540180 973280 TRUE FALSE 1039796.219 691401.9181 922038.5033 594110.4814 634680.7395 463616.4371 806916.9402 741424.8554 587163.88 941521.9533 1.104378092 0.734344978 0.97930643 0.631010758 0.67410084 0.492411712 0.857034653 0.787474846 0.623632702 1 19.84463521 -1.607252244 0.940926203 0.723844181 199.9999929 0.305747382 0.153928693 1142.293427 2.478956598 0.04907663 489169.4997 0.02470289 1.607252244 199.2761487 AGTATS(ph)PAGSSPAVAGGTQR ddPTM_A459_MK2206_30min_R2 1 AGTATSPAGSSPAVAGGTQR 20 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AGT(0.001)AT(0.009)S(0.895)PAGS(0.009)S(0.086)PAVAGGTQR 150.9 1.14E-06 0 20863 11154 13217 14210 7043 11200 13872 12012 8466.5 14873 TRUE FALSE 22460.28732 10600.10858 13657.64818 13048.99754 6766.456432 11626.22385 12050.58974 13582.00964 9202.900866 14387.69523 1.561076112 0.736748201 0.94925893 0.906955377 0.470294674 0.808067148 0.837562205 0.944001762 0.639636906 1 13.81254788 -4.758241013 24.99927073 0.806053586 1.561077151 0.684684326 0.152827546 51.47716134 402291.8496 0.037741184 0.262482986 1.74E-05 4.758241013 0.755023565 AGTDS(ph)PVSCASVTEER ddPTM_A459_MK2206_30min_R1 4 AGTDSPVSCASVTEER 16 0 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 AGT(0.001)DS(0.999)PVSCASVTEER;AGT(0.003)DS(0.997)PVSCASVTEER;AGT(0.325)DS(0.674)PVSCASVTEER;AGT(0.001)DS(0.999)PVSCASVTEER 357.92 1.57E-196 77025000 10728 10203.3 9341.1 8442.9 9779.1 8815.4 10182 9759.5 7954.4 7139.8 TRUE FALSE 9815.527265 9539.063315 8707.052158 9093.173621 9389.577739 9314.52033 9502.777358 9674.17372 8781.288345 8024.332327 1.223220433 1.18876723 1.085081201 1.133200028 1.170138194 1.160784468 1.18424524 1.205604819 1.094332586 1 12.97016564 -8.54884977 4.404847903 1.000117253 1.165464383 0.675721643 0.036661442 0.118652275 8.147796988 0.038013372 0.009924612 2.83E-09 8.54884977 0.16534713 AGTDS(ph)PVSCASVTEER ddPTM_A459_MK2206_30min_R2 3 AGTDSPVSCASVTEER 16 0 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 AGT(0.007)DS(0.992)PVS(0.001)CASVTEER;AGTDS(1)PVSCASVTEER;AGT(0.003)DS(0.997)PVSCASVTEER 278.85 1.75E-62 102595000 98130 120815 93998 132547 128697 110131 126271 101544 100951 103253 TRUE FALSE 105642.9082 114815.5028 97131.84641 121717.4861 123643.7091 114322.1124 109691.466 114816.1495 109731.5355 99883.86307 1.057657413 1.14949001 0.972447835 1.218590094 1.237874721 1.144550369 1.098190064 1.149496485 1.098591225 1 16.607964 -5.772044115 24.99995229 1.144666255 1.068827559 0.167239495 0.07436898 356.3733889 840126.126 0.020816348 0.031240517 1.69E-06 5.772044115 -0.075838696 AGTEDEEEEEEGRR ddPTM_A459_MK2206_30min_R1 1 AGTEDEEEEEEGRR 14 1 F8WBH7;O95456-2;O95456 F8WBH7 PSMG1 Proteasome assembly chaperone 1 0 180.61 0.00010004 10528000 2653 2663.8 2739.2 2424.2 2548.9 2660.8 2958.2 2835.2 3065.9 2820.4 FALSE TRUE 2427.348419 2490.386136 2553.270736 2610.912304 2447.371916 2811.452197 2760.863876 2810.412145 3384.611276 3169.812445 0.76577036 0.785657252 0.805495839 0.823680375 0.772087295 0.886945914 0.870986509 0.886617803 1.067763893 1 11.63018176 -7.756488622 0.886824617 1.030638794 0.792595536 0.824253204 0.039842181 0.228830448 0.330479069 0.034765965 0.014899593 1.75E-08 7.756488622 -0.238043258 AGTEDEEEEEEGRR ddPTM_A459_MK2206_30min_R2 2 AGTEDEEEEEEGRR 14 1 F8WBH7;O95456-2;O95456 F8WBH7 PSMG1 Proteasome assembly chaperone 1 0 ; 97.463 0.014988 16658300 35915 30410 38068 41009 34463 37914 40198 25995.1 32366 35477 FALSE TRUE 38664.68001 28899.88362 39337.16812 37658.43352 33109.80946 39356.84384 34919.95431 29392.74882 35181.13618 34319.3884 1.126613317 0.842086208 1.146208308 1.097293258 0.96475523 1.14678162 1.017499319 0.856447338 1.025109649 1 15.06673622 -7.535481823 24.85091124 0.951861734 1.049409913 0.154145622 0.096974404 383.2534945 755693.873 0.043962592 0.025402764 2.91E-08 7.535481823 0.09754818 AGTFIAPPVYSNITPY(ph)QSHLRSPVR ddPTM_A459_MK2206_30min_R2 1 AGTFIAPPVYSNITPYQSHLRSPVR 25 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 AGTFIAPPVY(0.118)S(0.138)NIT(0.002)PY(0.467)QS(0.138)HLRS(0.138)PVR 71.148 0.0023084 9205900 65435 130240 94824 119500 129550 142040 102960 88093 123870 82559 TRUE FALSE 70444.75391 123772.471 97985.38483 109736.4677 124463.2161 147445.4317 89441.22832 99607.05757 134643.9887 79865.10659 0.882046702 1.549769058 1.226886046 1.374022679 1.558417955 1.846180867 1.119903699 1.247191193 1.685892556 1 16.2852777 -4.752191708 24.89024972 1.412418581 0.882045607 0.279363861 0.249393164 458.9099011 1235068.89 0.061035135 0.74393761 1.77E-05 4.752191708 -0.530372974 AGTFIAPPVYSNITPYQS(ph)HLRSPVR ddPTM_A459_MK2206_30min_R1 1 AGTFIAPPVYSNITPYQSHLRSPVR 25 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 AGTFIAPPVY(0.006)S(0.007)NIT(0.026)PY(0.295)QS(0.333)HLRS(0.333)PVR 49.66 0.017137 13737000 2841.3 2301.7 2282.9 2341.3 3281 2225.6 2231.5 2595.8 1745.6 1383.9 TRUE FALSE 2599.632515 2151.858912 2127.943109 2521.627332 3150.310822 2351.611549 2082.640707 2573.105194 1927.061367 1555.34798 1.671415367 1.383522491 1.368145994 1.621262485 2.025470096 1.511952038 1.339019135 1.654359814 1.238990497 1 10.60302168 -8.475149339 3.328349311 1.001597218 1.565495017 0.49328949 0.190436458 0.195398449 4.72675461 0.195898357 0.051968202 3.35E-09 8.475149339 0.563897799 AGTFIAPPVYSNITPYQSHLRS(ph)PVR ddPTM_A459_MK2206_30min_R2 1 AGTFIAPPVYSNITPYQSHLRSPVR 25 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 AGTFIAPPVYSNIT(0.001)PY(0.064)QS(0.406)HLRS(0.528)PVR 64.87 0.0010041 12724000 33958 58040 50643 53309 62196 59923 59598 39553 49092 40281 TRUE FALSE 36557.85059 55157.818 52331.41234 48953.48417 59753.87253 62203.41176 51772.71101 44722.71291 53361.93342 38966.63427 0.93818343 1.415514043 1.342980048 1.256292341 1.533462503 1.596324982 1.328642106 1.147718137 1.369426291 1 15.2499517 -9.225175676 0.875020799 0.998276784 1.346188898 0.223936238 0.17808276 4.448407237 4.317434388 0.208580632 0.059394754 5.95E-10 9.225175676 0.347912114 AGTGYAS(ph)PDR ddPTM_A459_MK2206_30min_R1 1 AGTGYASPDR 10 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 AGT(0.001)GYAS(0.999)PDR 98.182 0.019835 11084000 4028.4 4199.2 3239.3 3058.4 3740.2 3575.8 5083.2 3456.7 4436.6 5242.5 TRUE FALSE 3685.763426 3925.831317 3019.425341 3293.958498 3591.219914 3778.258706 4744.109003 3426.478436 4897.800447 5891.980479 0.625555947 0.666300802 0.512463568 0.559057945 0.609509812 0.641254451 0.805180706 0.581549523 0.831265559 1 12.52453694 -8.747314887 0.492847662 1.017646957 0.587571196 0.729584696 0.07406478 0.727738929 0.390354088 0.101057988 0.041878228 1.79E-09 8.747314887 -0.43007576 AGTGYAS(ph)PDR ddPTM_A459_MK2206_30min_R2 1 AGTGYASPDR 10 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 AGTGYAS(1)PDR 80.979 0.046235 17338000 72010 66471 62835 70516 68100 79142 87964 58127 59130 78706 TRUE FALSE 77523.14097 63170.1468 64929.88754 64754.61723 65426.05182 82153.80427 76414.22114 65724.39848 64273.02052 76137.82967 1.018194783 0.829681475 0.852794042 0.850492029 0.859310702 1.079014264 1.003630146 0.863229209 0.844166701 1 16.21632583 AGTGYAS(ph)PDRTHVLAAGK ddPTM_A459_MK2206_30min_R2 2 AGTGYASPDRTHVLAAGK 18 1 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 AGT(0.414)GY(0.078)AS(0.494)PDRT(0.014)HVLAAGK;AGT(0.123)GY(0.124)AS(0.615)PDRT(0.139)HVLAAGK 58.755 0.027212 71277000 137468 172549 146554 177779 215052 183847 196465 155761 175592 182061 TRUE FALSE 147992.6558 163980.4676 151440.0372 163253.887 206607.9779 190843.4264 170668.9095 176119.4975 190864.6748 176120.3645 0.840292695 0.931070453 0.859866703 0.926944976 1.173106691 1.08359659 0.969046992 0.999995077 1.083717237 1 17.42620221 -6.041508503 10.98661188 1.04919567 0.884265452 0.657385179 0.058063472 0.586898162 154.4807908 0.017894747 0.023238821 9.09E-07 6.041508503 -0.164930218 AGTGYASPDRT(ph)HVLAAGK ddPTM_A459_MK2206_30min_R1 1 AGTGYASPDRTHVLAAGK 18 1 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 AGTGYAS(0.024)PDRT(0.976)HVLAAGK 160.76 0.00012513 11768000 1506.5 1638.1 1562.1 1441.1 1446.2 1565.4 1809.9 1431.2 1188 1251.8 TRUE FALSE 1378.364264 1531.459392 1456.069004 1552.093772 1388.594792 1654.031595 1689.164873 1418.687169 1311.496851 1406.882435 0.979729528 1.088548236 1.034961393 1.103214976 0.9870013 1.175671509 1.200643943 1.008390704 0.932200743 1 10.45828606 -7.989672693 24.95874095 0.967498787 1.082419462 0.32394606 0.068809436 227.3205814 549381.569 0.038895212 0.018653377 1.02E-08 7.989672693 0.114920675 AGTHFDS(ph)ARR ddPTM_A459_MK2206_30min_R2 1 AGTHFDSARR 10 1 F8WCG6;Q96L42 F8WCG6 KCNH8 Potassium voltage-gated channel subfamily H member 8 1 AGT(0.021)HFDS(0.979)ARR 64.841 0.046437 6981100 0 498.55 0 536.92 0 431.28 528.14 560.53 552.16 633.52 TRUE FALSE 0 473.792732 0 493.0519185 0 447.6926626 458.7945836 633.7931956 600.1858787 612.8482943 0 0.773099536 0 0.804525236 0 0.730511395 0.74862668 1.034176323 0.979338418 1 9.25938618 -7.190926551 1.867849084 0.987678161 0.352331824 0.508087873 0.287715913 0.285193104 1.949718476 0.1332597 0.088393156 6.44E-08 7.190926551 -0.635346337 AGTLSITEFADMLS(ph)GNAGGFRSR ddPTM_A459_MK2206_30min_R1 1 AGTLSITEFADMLSGNAGGFRSR 23 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 AGTLSITEFADMLS(0.526)GNAGGFRS(0.474)R 67.218 0.0068501 6163100 1270.7 1049.3 1322.2 2442.2 3321.4 2124.1 1516.8 4627.7 0 161.02 TRUE FALSE 1162.620292 980.9903793 1232.452748 2630.298667 3189.101605 2244.364706 1415.61704 4587.240507 0 180.9683732 6.424439097 5.420783542 6.810321195 14.53457651 17.62242511 12.40197205 7.822455461 25.3482994 0 1 7.499593778 -5.546295264 24.75606428 10 5.970843186 0.077844694 7.115149528 626.291766 662115.6257 1.91999802 3.325767625 2.84E-06 5.546295264 -4.029156814 AGTLSITEFADMLSGNAGGFRS(ph)R ddPTM_A459_MK2206_30min_R1 2 AGTLSITEFADMLSGNAGGFRSR 23 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 AGTLSITEFADMLS(0.095)GNAGGFRS(0.905)R;AGTLSITEFADMLS(0.001)GNAGGFRS(0.999)R 145.16 8.74E-08 13006200 1443.04 1407.45 1438.28 2126.52 3163.74 2599.03 1847.24 4085.7 711.38 407.59 TRUE FALSE 1320.30187 1315.824749 1340.653561 2290.304939 3037.721536 2746.184833 1724.01399 4049.979156 785.3304967 458.0853263 2.882218212 2.872444659 2.926645941 4.999734345 6.631344341 5.994919886 3.763521534 8.841102133 1.714376016 1 8.83947254 -5.767751481 6.185222257 5.134904576 2.878498901 0.106193364 2.177076722 0.247421048 36.95842209 0.568636149 0.910074068 1.71E-06 5.767751481 -2.256405675 AGTQIENIDEDFRDGLK ddPTM_A459_MK2206_30min_R1 3 AGTQIENIDEDFRDGLK 17 1 O43707;F5GXS2;O43707-3;K7EP19 O43707 ACTN4 Alpha-actinin-4 0 ;; 277.94 4.08E-63 52020600 8717.1 8928.6 8957.3 7911.5 8795.8 7611.9 8428.97 7863.6 8024.2 7461.29 FALSE TRUE 7975.66487 8347.346517 8349.303432 8520.845101 8445.444661 8042.8792 7866.688791 7794.849374 8858.344305 8385.650935 0.951108618 0.995432147 0.995665512 1.016122084 1.007130481 0.959124016 0.938113076 0.92954613 1.056369312 1 13.03370706 -6.763949765 24.99816356 0.9698198 0.994644237 0.030760883 0.036956145 173.8048834 1730719.419 0.012801888 0.011805164 1.72E-07 6.763949765 0.024824437 AGTQIENIDEDFRDGLK ddPTM_A459_MK2206_30min_R2 1 AGTQIENIDEDFRDGLK 17 1 O43707;F5GXS2;O43707-3;K7EP19 O43707 ACTN4 Alpha-actinin-4 0 165.24 5.09E-06 5995700 15153 18318 17530 15769 16379 14421 15928 13796 12230 18818 FALSE TRUE 16313.12533 17408.35476 18114.44145 14480.62226 15735.87816 14969.80126 13836.63447 15599.18457 13293.74329 18203.9702 0.896130083 0.9562944 0.995081911 0.795465061 0.864420123 0.822337166 0.760088833 0.856911124 0.730266153 1 14.15196551 -5.765900741 24.99998165 0.824675935 0.949881365 0.3486719 0.072300842 106.4466016 596496.0699 0.018917346 0.029171628 1.71E-06 5.765900741 0.125205429 AGTQIENIEEDFR ddPTM_A459_MK2206_30min_R2 2 AGTQIENIEEDFR 13 0 P12814-4;P12814-3;P12814;P12814-2;A0A494C1A0;P35609;P35609-2;G3V2N5;Q08043;A0A087WSZ2;A0A494C033;A0A494C166;G3V5M4;A0A494C0Q3;G3V380 P12814-4 ACTN1;ACTN2;ACTN3 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3 0 ; 141.34 0.011547 4082900 16172.1 14326.9 12212.6 16457 13628.6 16541.4 14464.3 12434.4 13965.4 16619.9 FALSE TRUE 17410.24841 13615.44698 12619.76199 15112.41046 13093.47269 17170.89457 12565.12004 14059.61877 15180.08525 16077.59402 1.082888919 0.846858489 0.784928514 0.939967164 0.814392543 1.068001502 0.781529874 0.874485247 0.944176425 1 13.97276391 AGVDYAPNLPPFPS(ph)PADVK ddPTM_A459_MK2206_30min_R1 1 AGVDYAPNLPPFPSPADVK 19 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 AGVDYAPNLPPFPS(1)PADVK 126.4 0.00036952 9229200 3668.2 3470.9 3461.2 2430.8 2881.2 2457.2 3083.3 1866.8 3056.5 3245.8 TRUE FALSE 3356.200328 3244.943779 3226.263387 2618.020637 2766.435703 2596.324541 2877.618683 1850.478764 3374.234113 3647.914209 0.920032691 0.889534017 0.884413175 0.717676044 0.758360955 0.711728509 0.788839462 0.507270363 0.92497628 1 11.83285609 -5.716081904 7.033134584 0.749743222 0.898612979 0.157457334 0.125262247 0.301480869 36.20233659 0.03196367 0.055061363 1.92E-06 5.716081904 0.148869756 AGVDYAPNLPPFPS(ph)PADVK ddPTM_A459_MK2206_30min_R2 3 AGVDYAPNLPPFPSPADVK 19 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 AGVDYAPNLPPFPS(1)PADVK;AGVDYAPNLPPFPS(1)PADVK;AGVDYAPNLPPFPS(1)PADVK 163.45 6.65E-07 9196000 129244 113959 114163 108898 104314 78503 111003 73651 69132 100775 TRUE FALSE 139139.02 108299.9618 117969.1374 100000.6851 100218.1082 81490.48667 96428.17276 83277.43858 75144.9764 97486.72 1.427261272 1.110920152 1.210104694 1.025787769 1.028018054 0.835913719 0.989141626 0.854243928 0.770822697 1 16.57291808 -4.466892915 0.453048287 0.865591152 1.885563669 0.763165586 0.089059121 3.051703771 0.393391509 0.059886935 1.772939678 3.41E-05 4.466892915 1.019972517 AGVLAGHDNR ddPTM_A459_MK2206_30min_R1 3 AGVLAGHDNR 10 0 B3KVK2;E7EP32;P62879-2;P62873-2;Q9HAV0;P62879;P62873 B3KVK2 GNB1;GNB2;GNB4 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1;Guanine nucleotide-binding protein subunit beta-4 0 ;; 120.45 0.007143 25417800 20123.1 21181.4 20692 19339.4 21476.3 19013.2 23328.5 21322.4 6357.5 17853.3 FALSE TRUE 18411.52467 19802.48701 19287.48469 20828.92394 20620.85349 20089.71095 21772.29833 21135.9805 7018.384876 20065.10159 0.917589407 0.986911874 0.961245305 1.038067206 1.027697438 1.001226476 1.085082885 1.053370221 0.34978068 1 14.29240084 -8.21889916 24.99941924 0.674889546 1.010460176 0.435285413 0.152167225 339.835009 199709.8019 0.092856495 0.035095939 6.04E-09 8.21889916 0.33557063 AGVLAGHDNR ddPTM_A459_MK2206_30min_R2 4 AGVLAGHDNR 10 0 B3KVK2;E7EP32;P62879-2;P62873-2;Q9HAV0;P62879;P62873 B3KVK2 GNB1;GNB2;GNB4 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1;Guanine nucleotide-binding protein subunit beta-4 0 ;;; 131.12 0.0037432 22422100 114196 139970 142501 144641 124362 150316 135460 106769 160716 130323 FALSE TRUE 122938.9336 133019.2933 147251.9122 132823.3676 119478.923 156036.3807 117673.9393 120724.0749 174694.7872 126070.5712 0.975159646 1.055117718 1.16801178 1.053563622 0.947714616 1.237690757 0.933397368 0.957591242 1.385690455 1 16.94387202 -8.230532224 24.99875413 1.192845653 1.046007876 0.185238848 0.127014028 971.050137 785420.5582 0.081669139 0.030861134 5.88E-09 8.230532224 -0.146837777 AGVLAHLEEER ddPTM_A459_MK2206_30min_R1 4 AGVLAHLEEER 11 0 P35579;P35579-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35579-2;P35580 MYH9;MYH10 Myosin-9;Myosin-10 0 ;;; 224.75 4.39E-06 43179600 21799.9 20491.2 21805 18266.8 21317.7 22133.5 20191.2 17633.6 18045.8 16227.3 FALSE TRUE 19945.70403 19157.21916 20324.93735 19673.7121 20468.57087 23386.67964 18844.28189 17479.43129 19921.72549 18237.66043 1.093654754 1.050420871 1.114448721 1.078741003 1.122324376 1.282328933 1.033262022 0.958425087 1.092339972 1 14.15463305 -7.496143244 24.99392409 1.014398183 1.121136749 0.371635189 0.065572611 799.8388271 747739.1604 0.028445176 0.019108696 3.19E-08 7.496143244 0.106738566 AGVLAHLEEER ddPTM_A459_MK2206_30min_R2 4 AGVLAHLEEER 11 0 P35579;P35579-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35579-2;P35580 MYH9;MYH10 Myosin-9;Myosin-10 0 ;;; 179.42 7.52E-05 34233800 110000 140873 117874 149194 135389 129858 145317 123763 121391 121209 FALSE TRUE 118421.6846 133877.4517 121803.8603 137004.373 130072.9476 134799.8372 126236.7033 139939.249 131949.3698 117253.9603 1.009958933 1.14177339 1.038803807 1.168441327 1.10932669 1.149639952 1.076609294 1.193471408 1.12532975 1 16.83927713 -4.7532811 24.99537075 1.11707748 1.009958736 0.220818732 0.056342023 426.3340726 1306101.473 0.012983851 0.142967886 1.76E-05 4.7532811 -0.107118744 AGVLT(ph)PPDLGPHPPPPAPR ddPTM_A459_MK2206_30min_R1 2 AGVLTPPDLGPHPPPPAPR 19 0 I3L2J0 I3L2J0 CIC 1 AGVLT(1)PPDLGPHPPPPAPR;AGVLT(1)PPDLGPHPPPPAPR 151.64 2.81E-05 20429000 4453.4 4302.3 4442.3 4531 5020.7 4380.3 5126.9 4123.7 3663.9 3370.5 TRUE FALSE 4074.614944 4022.219488 4140.769053 4879.978405 4820.714887 4628.308801 4784.893856 4087.646926 4044.775516 3788.062986 1.075646038 1.061814311 1.093109874 1.288251653 1.272606846 1.221814109 1.263150553 1.079086314 1.067768813 1 11.8872446 -7.927006401 6.717628154 1.046540852 1.183180038 0.374791503 0.07999366 0.261951132 19.16582923 0.051176123 0.024241056 1.18E-08 7.927006401 0.136639186 AGVLT(ph)PPDLGPHPPPPAPR ddPTM_A459_MK2206_30min_R2 4 AGVLTPPDLGPHPPPPAPR 19 0 I3L2J0 I3L2J0 CIC 1 AGVLT(1)PPDLGPHPPPPAPR;AGVLT(1)PPDLGPHPPPPAPR;AGVLT(1)PPDLGPHPPPPAPR;AGVLT(1)PPDLGPHPPPPAPR 177.02 1.10E-12 26537900 75339 105696 87146 101441 100068 96334 96648 73285 80239 79228 TRUE FALSE 81107.01177 100447.2903 90051.40414 93152.94581 96138.82752 100000.0579 83958.0015 82863.60113 87218.04318 76642.79685 1.058247025 1.310590094 1.174949347 1.215416838 1.254375251 1.30475481 1.095445429 1.081166196 1.137980955 1 16.22586259 -7.365650893 7.375966438 1.083815665 1.223017166 0.464922004 0.074073885 0.24864231 15.53898073 0.029869484 0.020044925 4.31E-08 7.365650893 0.139201502 AGVNSDS(ph)PNNCSGK ddPTM_A459_MK2206_30min_R1 3 AGVNSDSPNNCSGK 14 0 Q9Y4C1;F8WE62 Q9Y4C1 KDM3A Lysine-specific demethylase 3A 1 AGVNS(0.001)DS(0.881)PNNCS(0.118)GK;AGVNSDS(0.534)PNNCS(0.466)GK;AGVNSDS(0.975)PNNCS(0.024)GK 202.32 1.02E-14 6325200 4073.9 3785.27 3640.32 3053.06 3249.25 3084.61 3386.23 3589.39 2774.39 3003.49 TRUE FALSE 3727.393412 3538.848235 3393.225221 3288.20721 3119.825492 3259.257953 3160.340775 3558.008342 3062.797769 3375.585016 1.104221459 1.048365903 1.005225821 0.974114767 0.924232534 0.965538695 0.936234981 1.054041988 0.907338359 1 11.72092184 -5.108306448 1.398511848 0.965049451 1.118990807 0.573467943 0.039048643 0.507611285 1.353616536 0.011337293 0.093088969 7.79E-06 5.108306448 0.153941356 AGVNSDS(ph)PNNCSGK ddPTM_A459_MK2206_30min_R2 4 AGVNSDSPNNCSGK 14 0 Q9Y4C1;F8WE62 Q9Y4C1 KDM3A Lysine-specific demethylase 3A 1 AGVNS(0.001)DS(0.997)PNNCS(0.002)GK;AGVNS(0.062)DS(0.93)PNNCS(0.007)GK;AGVNS(0.077)DS(0.901)PNNCS(0.022)GK;AGVNS(0.118)DS(0.872)PNNCS(0.01)GK 211.9 3.22E-06 12954700 53208.1 61075 57326.5 63403 61610 53207.5 67037 46585.1 49100.2 64612.8 TRUE FALSE 57281.75305 58042.10431 59237.7369 58222.77208 59190.88183 55232.3487 58234.96137 52673.93252 53370.84664 62504.48963 0.916442217 0.928606963 0.947735711 0.93149744 0.946986084 0.883654103 0.931692455 0.842722384 0.853872209 1 15.9316722 -6.762924011 24.99987981 0.894389891 0.934535855 0.111521944 0.042038622 70.19443881 1181997.592 0.013981748 0.013002749 1.73E-07 6.762924011 0.040145964 AGVRPS(ph)SSGSAWEACSEAPSK ddPTM_A459_MK2206_30min_R1 1 AGVRPSSSGSAWEACSEAPSK 21 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 AGVRPS(0.469)S(0.469)S(0.046)GS(0.015)AWEACSEAPSK 66.545 0.0050667 5140900 1449 1811.1 1592.3 1663.7 1493.3 1184.9 1574.4 1414.6 1585.7 1540 TRUE FALSE 1325.754941 1693.197061 1484.219112 1791.838462 1433.818699 1251.988014 1469.374649 1402.232301 1750.539189 1730.786826 0.765983956 0.97828169 0.857540102 1.03527392 0.82842016 0.723363499 0.848963388 0.810170427 1.01141236 1 10.75721233 -8.273022026 23.83450648 1.005706256 0.860527807 0.319779405 0.087137434 575.0780498 1183359.829 0.083956034 0.022513527 5.33E-09 8.273022026 -0.145178449 AGVRPS(ph)SSGSAWEACSEAPSK ddPTM_A459_MK2206_30min_R2 1 AGVRPSSSGSAWEACSEAPSK 21 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 AGVRPS(0.477)S(0.477)S(0.035)GS(0.011)AWEACSEAPSK 72.755 0.0024011 9371000 33673 38840 37194 29967 28199 24364 32176 17108 20209 32788 TRUE FALSE 36251.03077 36911.26208 38434.0294 27518.60024 27091.76557 25291.18909 27951.25255 19344.07434 21966.74229 31718.13025 1.142911971 1.163727552 1.211736918 0.867598437 0.854141318 0.797373266 0.881238974 0.609874359 0.692561072 1 14.95302011 -5.848596553 4.027893872 0.794880958 1.173091103 0.726350825 0.100906664 0.11295579 3.449132364 0.029935806 0.046915867 1.42E-06 5.848596553 0.378210144 AGVRPSS(ph)SGSAWEACSEAPSK ddPTM_A459_MK2206_30min_R2 1 AGVRPSSSGSAWEACSEAPSK 21 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 AGVRPS(0.162)S(0.774)S(0.049)GS(0.015)AWEACSEAPSK 88.541 0.00048128 8318800 32095 38593 33179 30104 27876 25559 30430 21736 22586 26222 TRUE FALSE 34552.21788 36676.52774 34285.1713 27644.4069 26781.44817 26531.66566 26434.50445 24576.96983 24550.48945 25366.37829 1.362126571 1.44587167 1.351598991 1.08980504 1.055785255 1.045938263 1.042107949 0.968879733 0.967835817 1 14.63062993 -5.790040107 2.520207839 1.015893527 1.409173201 0.960019404 0.034269718 0.052899708 0.685106078 0.011203621 0.019963276 1.62E-06 5.790040107 0.393279674 AGVVNGTGAPGQS(ph)PGAGR ddPTM_A459_MK2206_30min_R1 2 AGVVNGTGAPGQSPGAGR 18 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;Q13330-2 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 AGVVNGTGAPGQS(1)PGAGR;AGVVNGTGAPGQS(1)PGAGR 191.89 2.45E-10 18565000 5821.8 5343.5 4946.4 4678.5 5260.5 4623 5857.4 4901.7 4482.4 3877.9 TRUE FALSE 5326.625339 4995.637179 4610.652149 5038.838881 5050.963146 4884.750265 5466.663533 4858.844954 4948.36152 4358.323529 1.222172999 1.146229082 1.057895798 1.156141541 1.158923405 1.120786521 1.254304206 1.11484265 1.135381871 1 12.08955758 -8.939548535 1.670302435 1.000124289 1.152775539 0.442947628 0.05156298 2.083846351 7.250632834 0.050057672 0.014198173 1.15E-09 8.939548535 0.15265125 AGVVNGTGAPGQS(ph)PGAGR ddPTM_A459_MK2206_30min_R2 3 AGVVNGTGAPGQSPGAGR 18 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;Q13330-2 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 AGVVNGT(0.001)GAPGQS(0.999)PGAGR;AGVVNGTGAPGQS(1)PGAGR;AGVVNGTGAPGQS(1)PGAGR 171.39 6.69E-08 28959000 35491.4 44000.7 34859.1 41999.3 36150.8 41484.8 41731.8 33735 30560.2 37724.4 TRUE FALSE 38208.64887 41815.68922 36021.285 38567.82284 34731.33795 43063.53313 36252.36453 38144.28033 33218.27096 36493.45592 1.047000014 1.145840759 0.987061491 1.056842162 0.951714138 1.180034394 0.993393572 1.045236176 0.910252814 1 15.15535016 -8.186663334 7.502561472 0.955577771 1.051477576 0.237894467 0.068568448 0.354903317 31.29739148 0.044960365 0.016765125 6.51E-09 8.186663334 0.095899805 AGWGS(ph)PCHLSGESVILLGPTVGTESK ddPTM_A459_MK2206_30min_R1 1 AGWGSPCHLSGESVILLGPTVGTESK 26 0 Q7Z5J4-3;Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2;A8MXE8;Q7Z5J4-4 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 AGWGS(0.478)PCHLS(0.045)GES(0.478)VILLGPTVGTESK 53.905 0.0082373 11553000 4010.5 1308.9 1651.5 1072.2 5558.8 5487.6 5190.8 3450.2 1547 1389 TRUE FALSE 3669.385915 1223.690372 1539.400781 1154.78103 5337.381225 5798.30317 4844.531203 3420.035265 1707.816186 1561.079806 2.350543451 0.78387432 0.986112802 0.739732219 3.419031624 3.714290036 3.103320652 2.190813853 1.093996719 1 10.60832858 -6.250982683 24.99997739 2.578639172 1.167912504 0.27250632 0.942359705 877.5788678 2098123.823 0.291182994 0.371885415 5.61E-07 6.250982683 -1.410726669 AGWGS(ph)PCHLSGESVILLGPTVGTESK ddPTM_A459_MK2206_30min_R2 2 AGWGSPCHLSGESVILLGPTVGTESK 26 0 Q7Z5J4-3;Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2;A8MXE8;Q7Z5J4-4 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 AGWGS(0.787)PCHLS(0.102)GES(0.111)VILLGPTVGTESK;AGWGS(0.965)PCHLS(0.013)GES(0.022)VILLGPTVGTESK 88.045 4.28E-05 14398900 27389 85647 52870 124849 128359 172604 132948 74366 115329 68802 TRUE FALSE 29485.9229 81393.89452 54632.65941 114648.4373 123318.9807 179172.5662 115491.7679 84085.89154 125360.108 66556.99637 0.443017632 1.222920188 0.820840218 1.722560265 1.852832721 2.692017007 1.735231068 1.26336668 1.883500079 1 16.02230271 -5.782688256 6.194180357 1.795160432 0.865091865 0.453768201 0.45230808 0.14623354 19.00126136 0.129848432 0.202703576 1.65E-06 5.782688256 -0.930068568 AGY(ph)NLT(ph)LS(ph)AMLLDCDGGLQMK ddPTM_A459_MK2206_30min_R1 1 AGYNLTLSAMLLDCDGGLQMK 21 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 3 AGY(1)NLT(1)LS(1)AMLLDCDGGLQMK 56.424 0.034215 0 212.2 273.12 188.82 170 190.84 216.47 410.01 153.64 175.45 246.72 TRUE FALSE 194.1512757 255.3398384 176.0034245 183.0934295 183.2384387 228.7263443 382.658981 152.2967417 193.6886554 277.2855362 0.70018537 0.920855238 0.634737126 0.660306455 0.660829415 0.824876578 1.380017819 0.549241564 0.69851698 1 8.115228554 -6.994885501 24.03905644 0.90267603 0.721617214 0.151254701 0.214261851 188.5832992 886363.0736 0.078514904 0.068982189 1.01E-07 6.994885501 -0.181058816 AGYS(ph)TDESSSSSLHATR ddPTM_A459_MK2206_30min_R2 1 AGYSTDESSSSSLHATR 17 0 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 AGY(0.056)S(0.555)T(0.389)DESSSSSLHATR 124.5 0.00086565 15584000 5301.1 22813 16784 43048 48374 56875 38966 22423 32370 21961 TRUE FALSE 5706.956292 21680.13959 17343.57018 39530.8407 46474.5937 59039.41798 33849.71739 25353.76309 35185.48409 21244.41437 0.26863326 1.020510108 0.816382597 1.860763964 2.187614725 2.779056036 1.593346694 1.193431961 1.65622283 1 14.37479595 -5.736347582 5.718218298 1.817093391 0.71921734 0.478962571 0.499608932 0.156815936 14.93800915 0.147566504 0.249304041 1.84E-06 5.736347582 -1.097876051 AGYST(ph)DESSSSSLHATR ddPTM_A459_MK2206_30min_R1 2 AGYSTDESSSSSLHATR 17 0 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 AGYS(0.002)T(0.998)DESSSSSLHATR;AGYS(0.023)T(0.977)DESSSSSLHATR 276.34 1.66E-52 11535700 4269.8 1108.35 2048.86 1216.04 6068.1 5451.3 4738.2 3868.8 1459.66 1431.94 TRUE FALSE 3906.631088 1036.196214 1909.789092 1309.699612 5826.394728 5759.947895 4422.123323 3834.975489 1611.39688 1609.339538 2.427474748 0.643864262 1.186691215 0.813811866 3.620363876 3.579075614 2.74778766 2.382949899 1.001278377 1 10.65225302 -6.241442995 24.86407602 2.535209057 1.217577214 0.242037976 0.948808801 993.9606087 1235918.827 0.286549683 0.369427822 5.74E-07 6.241442995 -1.317631842 AGYST(ph)DESSSSSLHATR ddPTM_A459_MK2206_30min_R2 2 AGYSTDESSSSSLHATR 17 0 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 AGYS(0.039)T(0.961)DESSSSSLHATR;AGYS(0.018)T(0.982)DESSSSSLHATR 287.54 3.11E-75 8818200 6744.2 24832 14014.2 40147 40359 55986 34898 19713.3 28098 17726.3 TRUE FALSE 7260.541137 23598.87899 14481.42643 36866.86168 38774.30287 58116.58646 30315.85068 22289.896 30541.91325 17147.89228 0.423407205 1.376197063 0.844501831 2.14993546 2.261170191 3.389138764 1.76790536 1.299862142 1.781088471 1 14.06574364 -5.760303034 24.99999974 2.027724138 0.930851317 0.364094897 0.640351972 33.45277767 735934.8554 0.186198541 0.300618976 1.74E-06 5.760303034 -1.096872821 AHAS(ph)PFSGALTPSAPPGPEMNR ddPTM_A459_MK2206_30min_R1 1 AHASPFSGALTPSAPPGPEMNR 22 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3 O15027 SEC16A Protein transport protein Sec16A 1 AHAS(0.987)PFS(0.013)GALTPSAPPGPEMNR 150.23 2.46E-07 3171900 535.6 485.44 561.41 503.4 669.52 654.48 988.92 487.71 539.71 438.86 TRUE FALSE 490.0444075 453.8377678 523.3030534 542.1719552 642.8516007 691.536092 922.9509512 483.4460029 595.8147859 493.22929 0.993542795 0.920135476 1.06097319 1.099229032 1.303352444 1.402058041 1.871241165 0.980164829 1.207987437 1 8.946114665 -6.059527015 2.045617619 1.329912649 0.977305862 0.250512818 0.235232343 0.439722263 3.658955115 0.079486771 0.119947862 8.72E-07 6.059527015 -0.352606787 AHAS(ph)PFSGALTPSAPPGPEMNR ddPTM_A459_MK2206_30min_R2 1 AHASPFSGALTPSAPPGPEMNR 22 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3 O15027 SEC16A Protein transport protein Sec16A 1 AHAS(0.993)PFS(0.007)GALTPSAPPGPEMNR 74.63 0.0084575 0 7859.5 7762.1 7357.4 10846 10853 6216.8 7607.1 6076.2 8181.8 7948.3 TRUE FALSE 8461.229363 7376.645401 7602.692044 9959.847105 10426.85669 6453.38468 6608.278632 6870.380203 8893.438175 7688.947622 1.1004405 0.959382969 0.988781875 1.295345943 1.356083719 0.839306625 0.859451639 0.893539733 1.156652199 1 12.90857044 -6.789147476 24.99837164 0.937490139 1.130201135 0.310672197 0.140698635 300.3858171 271007.3712 0.05438497 0.047972978 1.62E-07 6.789147476 0.192710997 AHAWPS(ph)PYKDYEVK ddPTM_A459_MK2206_30min_R1 2 AHAWPSPYKDYEVK 14 1 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 1 AHAWPS(0.86)PY(0.139)KDY(0.001)EVK;AHAWPS(0.981)PY(0.019)KDYEVK 89.484 0.010702 110154000 5955.2 6647.7 4359.1 5164.5 4347.9 4569.5 6693.5 6100.1 7620 7093.2 TRUE FALSE 5448.678968 6214.933522 4063.216437 5562.270685 4174.713936 4828.221141 6246.988828 6046.767469 8412.126268 7971.959167 0.683480541 0.779599267 0.509688566 0.69772945 0.523674777 0.605650511 0.783620274 0.758504571 1.05521442 1 12.96071861 -8.000165786 1.526378818 1.033661548 0.637597096 0.736323843 0.087992504 0.205004603 0.856401915 0.077853061 0.026001975 1.00E-08 8.000165786 -0.396064452 AHAWPS(ph)PYKDYEVK ddPTM_A459_MK2206_30min_R2 1 AHAWPSPYKDYEVK 14 1 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 1 AHAWPS(0.944)PY(0.038)KDY(0.018)EVK 68.481 0.034792 21943000 109830 72095 79033 66626 72654 62688 128390 55820 85914 102670 TRUE FALSE 118238.6692 68514.86714 81667.92077 61182.44267 69801.2389 65073.63577 111532.2388 63115.86566 93386.64442 99319.88631 1.190483333 0.68984037 0.822271589 0.616014022 0.702792175 0.655192411 1.122959791 0.635480647 0.94026129 1 16.59979499 -8.505945552 22.50931181 1.000000076 0.796559819 0.111367974 0.190021897 357.6416513 475412.1175 0.176764636 0.045640433 3.12E-09 8.505945552 -0.203440257 AHEAQDAGYR ddPTM_A459_MK2206_30min_R1 2 AHEAQDAGYR 10 0 E5RJH4;H0YC26;G3V111;E7ETC2;Q5F2F8;H0YB04;P16298-2;P16298;Q08209;P48454-3;P16298-3;P48454-2;P48454;Q08209-2;Q08209-3;Q08209-5;P16298-4 E5RJH4 PPP3CC;PPP3CA;PPP3CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform 0 ; 140.49 0.0019852 2266940 414.19 350.76 362.161 508.19 308.04 320.71 483.43 285.61 0 347.07 FALSE TRUE 378.9609655 327.9254602 337.5785204 547.3308819 295.7701145 338.868323 451.1812668 283.1129419 0 390.0676518 0.971526256 0.840688682 0.865435826 1.403169115 0.758253378 0.868742439 1.156674399 0.725804718 0 1 8.607580551 -8.001787481 23.86889504 0.454300826 0.971865757 0.316314532 0.284456181 36.04038928 481249.6435 0.149918455 0.070158753 9.96E-09 8.001787481 0.517564932 AHEAQDAGYR ddPTM_A459_MK2206_30min_R2 2 AHEAQDAGYR 10 0 E5RJH4;H0YC26;G3V111;E7ETC2;Q5F2F8;H0YB04;P16298-2;P16298;Q08209;P48454-3;P16298-3;P48454-2;P48454;Q08209-2;Q08209-3;Q08209-5;P16298-4 E5RJH4 PPP3CC;PPP3CA;PPP3CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform 0 ; 151.83 0.00092321 6101200 6882.1 7606.5 7008.7 9394.2 7818 9123 7293.7 4629.67 11397.2 8711 FALSE TRUE 7408.998867 7228.772271 7242.36656 8626.663809 7511.026038 9470.182158 6336.028429 5234.783765 12388.50785 8426.760783 0.879222641 0.85783523 0.859448458 1.023722404 0.89133016 1.123822356 0.75189371 0.62120949 1.470138784 1 13.04076246 -8.264236941 24.99998858 1.235069366 0.88445019 0.427433631 0.165977744 242.9692199 2171194.429 0.135576749 0.041075321 5.44E-09 8.264236941 -0.350619175 AHFNAMFQPS(ph)SPTR ddPTM_A459_MK2206_30min_R1 1 AHFNAMFQPSSPTR 14 0 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 AHFNAMFQPS(0.498)S(0.498)PT(0.004)R 80.905 0.03301 67399000 2293.7 2315.8 2486.5 1816.9 2074.4 2027.5 2083 2090.8 1955.5 1861.5 TRUE FALSE 2098.60877 2165.040999 2317.723308 1956.837953 1991.772255 2142.295298 1944.046871 2072.520356 2158.781223 2092.116674 1.003103124 1.03485672 1.107836545 0.935338826 0.952036892 1.02398462 0.929224883 0.990633258 1.031864642 1 11.0307476 -5.770439711 24.99999967 0.978547047 1.047224595 0.373826848 0.040360318 197.8747314 549632.7628 0.011459015 0.017283424 1.70E-06 5.770439711 0.068677548 AHFNAMFQPS(ph)SPTR ddPTM_A459_MK2206_30min_R2 2 AHFNAMFQPSSPTR 14 0 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 AHFNAMFQPS(0.675)S(0.307)PT(0.018)R;AHFNAMFQPS(0.542)S(0.327)PT(0.13)R 173.51 0.00019259 31701600 55148 82404 62684 84878 78605 88314 83240 67264 61002 73333 TRUE FALSE 59370.17328 78311.93719 64773.85327 77943.19589 75518.57274 91674.85115 72310.48801 76055.63575 66307.84369 70940.15022 0.836905097 1.103915582 0.913077476 1.098717661 1.064539228 1.292284424 1.019316816 1.072109877 0.934701202 1 16.11431476 -4.754706805 24.92634256 1.061126012 0.836904701 0.298691601 0.100098252 286.6256094 1061088.55 0.025140125 0.238472673 1.76E-05 4.754706805 -0.224221312 AHFNAMFQPSS(ph)PTR ddPTM_A459_MK2206_30min_R1 3 AHFNAMFQPSSPTR 14 0 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 AHFNAMFQPS(0.231)S(0.767)PT(0.002)R;AHFNAMFQPS(0.034)S(0.964)PT(0.002)R;AHFNAMFQPS(0.182)S(0.809)PT(0.01)R 140.33 0.0012275 97483000 8733.2 7379.5 8488.9 6385.9 8456.5 8758.9 9125 7063.7 7640 7577.8 TRUE FALSE 7990.39548 6899.093209 7912.697119 6877.743124 8119.659698 9254.821349 8516.2879 7001.942816 8434.20534 8516.595073 0.938214793 0.810076462 0.929091621 0.807569582 0.953392715 1.086680918 0.999963932 0.822152839 0.990325977 1 13.05606104 -6.444884329 7.931229795 0.975399661 0.871695564 0.333802981 0.072757183 0.400726162 36.980333 0.023415493 0.026503109 3.59E-07 6.444884329 -0.103704096 AHFNAMFQPSS(ph)PTR ddPTM_A459_MK2206_30min_R2 3 AHFNAMFQPSSPTR 14 0 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 AHFNAMFQPS(0.094)S(0.902)PT(0.003)R;AHFNAMFQPS(0.231)S(0.769)PTR;AHFNAMFQPS(0.026)S(0.973)PT(0.002)R 157.33 0.00031408 87614200 123699 139527 121921 165107 148690 151439 154207 113437 117758 131884 TRUE FALSE 133169.4905 132598.2921 125985.7853 151617.2299 142851.6835 157202.1173 133959.4357 128263.6054 128000.378 127580.6359 1.043806449 1.039329293 0.987499274 1.188403153 1.119697221 1.232178506 1.049998181 1.005353238 1.003290014 1 16.96104985 -7.518727957 22.82640453 1.008128012 1.102076966 0.304544021 0.067265917 83.02314788 456597.7127 0.033801961 0.020182964 3.03E-08 7.518727957 0.093948953 AHGCFQDGR ddPTM_A459_MK2206_30min_R2 1 AHGCFQDGR 9 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 0 93.598 0.034221 881020 1300.1 2487.5 1052.3 2324.6 3108.2 3195.8 1969.9 2099.9 3668.9 1898.9 FALSE TRUE 1399.636656 2363.974367 1087.383157 2134.672744 2986.156451 3317.418408 1711.249764 2374.36414 3988.01429 1836.939049 0.761939628 1.28690953 0.591953858 1.162081423 1.625615424 1.805949093 0.93157678 1.292565555 2.171010679 1 10.84308804 -6.021306468 6.178671221 1.470257343 0.912452142 0.329391398 0.379072743 0.207296603 29.64415751 0.110120874 0.150286631 9.52E-07 6.021306468 -0.557805201 AHGLSLIPSTGLCS(ph)PDLVNR ddPTM_A459_MK2206_30min_R1 2 AHGLSLIPSTGLCSPDLVNR 20 0 O75030-11;O75030-10;O75030-9;O75030-12;O75030-4;O75030-3;O75030-8;O75030-7;O75030-6;O75030-2;O75030-5;O75030 O75030-11 MITF Microphthalmia-associated transcription factor 1 AHGLSLIPS(0.318)T(0.221)GLCS(0.46)PDLVNR;AHGLSLIPS(0.014)T(0.011)GLCS(0.975)PDLVNR 135.68 7.22E-05 14889000 3635.9 3236.5 3809.8 2945.81 4332.9 3762.5 3906.4 3967.7 3212.2 3061.5 TRUE FALSE 3326.647612 3025.803262 3551.201391 3172.696797 4160.311418 3975.529499 3645.811184 3933.010817 3546.119685 3440.781733 0.966829014 0.879394131 1.032091445 0.922086038 1.209118084 1.155414614 1.059588043 1.143057341 1.030614541 1 11.74852066 -6.243869458 24.84980561 1.107571896 0.950906236 0.53427885 0.068150963 570.7777326 807272.3676 0.019656132 0.025313907 5.70E-07 6.243869458 -0.156665661 AHGLSLIPSTGLCS(ph)PDLVNR ddPTM_A459_MK2206_30min_R2 2 AHGLSLIPSTGLCSPDLVNR 20 0 O75030-11;O75030-10;O75030-9;O75030-12;O75030-4;O75030-3;O75030-8;O75030-7;O75030-6;O75030-2;O75030-5;O75030 O75030-11 MITF Microphthalmia-associated transcription factor 1 AHGLSLIPS(0.004)T(0.04)GLCS(0.956)PDLVNR;AHGLSLIPS(0.005)T(0.005)GLCS(0.99)PDLVNR 160.98 5.33E-07 10497700 15941.5 24535 20621 26899 31824 27963 28352 27471 26782 25374 TRUE FALSE 17161.9935 23316.62758 21308.49385 24701.26565 30574.42986 29027.15156 24629.34834 31061.55402 29111.44995 24546.04846 0.69917541 0.949913695 0.868102818 1.006323511 1.245594781 1.182559042 1.003393617 1.2654401 1.185993338 1 14.58320317 -5.929199687 2.7534468 1.154848925 0.844782793 0.646927478 0.101645402 0.165675025 2.546220303 0.030089222 0.047435942 1.18E-06 5.929199687 -0.310066131 AHGS(ph)FSHVR ddPTM_A459_MK2206_30min_R2 1 AHGSFSHVR 9 0 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 AHGS(0.96)FS(0.04)HVR 89.266 0.019909 5267600 5838.2 7460.3 5809.2 5504.4 8396.3 7763.2 8682.6 10427 6739.8 10965 TRUE FALSE 6285.177081 7089.83235 6002.875829 5054.672912 8066.619074 8058.634016 7542.56419 11789.8447 7326.015621 10607.21295 0.592538032 0.668397286 0.565923948 0.476531671 0.760484315 0.75973152 0.711078794 1.111493166 0.690663576 1 13.37275802 -7.038469921 1.033313733 0.919933834 0.586422987 0.534748857 0.125007003 0.404872249 0.88438877 0.077876576 0.053939104 9.15E-08 7.038469921 -0.333510847 AHIY(ph)GIT(ph)FSISQAFMY(ph)FS(ph)YAGCFR ddPTM_A459_MK2206_30min_R1 1 AHIYGITFSISQAFMYFSYAGCFR 24 0 P21439-2;P21439 P21439-2 ABCB4 Multidrug resistance protein 3 4 AHIY(0.958)GIT(0.831)FS(0.201)IS(0.065)QAFMY(0.923)FS(0.533)Y(0.489)AGCFR 40.381 0.046709 0 275.3 0 270.64 189.28 126.63 265.1 225.07 302.96 227.85 0 TRUE FALSE 251.8842893 0 252.2697108 203.8583784 121.586059 280.1097329 210.055991 300.3112527 251.5358229 0 0 AHLDHIPDYTPPLLTTIS(ph)PEQESDER ddPTM_A459_MK2206_30min_R1 3 AHLDHIPDYTPPLLTTISPEQESDER 26 0 F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8;K7EM61 F5H0Q6 CLASRP CLK4-associating serine/arginine rich protein 1 AHLDHIPDYTPPLLT(0.003)T(0.008)IS(0.984)PEQES(0.005)DER;AHLDHIPDYTPPLLT(0.007)T(0.084)IS(0.672)PEQES(0.237)DER;AHLDHIPDYTPPLLT(0.028)T(0.087)IS(0.707)PEQES(0.177)DER 141.82 1.04E-09 12986300 3719.35 4265.18 4765.64 4513.35 3628.49 3355.61 3579.54 4067.22 3569.27 3491.39 TRUE FALSE 3402.999751 3987.516007 4442.161635 4860.968999 3483.95956 3545.601738 3340.755418 4031.660724 3940.308389 3923.929752 0.867242781 1.016204738 1.132069613 1.238801229 0.88787511 0.903584407 0.851380027 1.027454868 1.004174039 1 11.9380835 AHLDHIPDYTPPLLTTIS(ph)PEQESDER ddPTM_A459_MK2206_30min_R2 1 AHLDHIPDYTPPLLTTISPEQESDER 26 0 F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8;K7EM61 F5H0Q6 CLASRP CLK4-associating serine/arginine rich protein 1 AHLDHIPDYTPPLLT(0.035)T(0.025)IS(0.613)PEQES(0.326)DER 80.245 9.49E-05 3842600 7967.2 10358 11256 12508 10830 9429.5 12436 8808.8 11409 11430 TRUE FALSE 8577.174958 9843.636782 11631.26942 11486.05639 10404.75978 9788.34623 10803.13826 9960.140405 12401.3342 11057.04004 0.775720711 0.890259667 1.051933373 1.038800289 0.941007697 0.885259183 0.977037094 0.900796268 1.121578122 1 13.43267761 -4.94326031 3.5442363 0.981799992 0.778982222 0.492553256 0.067917739 0.214917822 5.193763165 0.017648559 0.092685561 1.14E-05 4.94326031 -0.20281777 AHLGS(ph)SDNVATMSNEER ddPTM_A459_MK2206_30min_R1 1 AHLGSSDNVATMSNEER 17 0 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 AHLGS(0.5)S(0.5)DNVATMSNEER 157.84 3.92E-05 3729000 1107.3 850.01 985.76 739.51 1001.2 834.2 894.77 789.95 820.62 872.74 TRUE FALSE 1013.11832 794.6741945 918.8493577 796.4671883 961.3200839 881.4316831 835.0815259 783.0435504 905.9263856 980.8616201 1.032886087 0.810179722 0.936777767 0.8120077 0.980077173 0.898630006 0.851375473 0.798322143 0.923602644 1 9.937905805 -7.016230652 24.18229794 0.876302023 0.907672877 0 0.080414737 2034.502951 3031232.526 0.028628438 0.022827931 9.63E-08 7.016230652 0.031370854 AHLGSS(ph)DNVATMSNEER ddPTM_A459_MK2206_30min_R2 1 AHLGSSDNVATMSNEER 17 0 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 AHLGS(0.332)S(0.668)DNVATMSNEER 108.66 0.0023179 3873900 11510 12926 11748 12634 14051 13917 19646 11136 10813 11477 TRUE FALSE 12391.21445 12284.11364 12139.67246 11601.76179 13499.28714 14446.62119 17066.4566 12591.51344 11753.49519 11102.50643 1.116073612 1.106427068 1.093417287 1.044967806 1.215877444 1.301203587 1.537171512 1.134114492 1.058634397 1 13.43859779 -6.353691058 5.796985098 1.237259034 1.092009087 0.125995011 0.140021272 0.414078877 20.93538194 0.045894644 0.052187154 4.43E-07 6.353691058 -0.145249947 AHLGTALK ddPTM_A459_MK2206_30min_R2 1 AHLGTALK 8 0 D6RD47;P62266;D6RDJ2;D6RIX0;D6R9I7 D6RD47 RPS23 40S ribosomal protein S23 0 113.41 0.015115 4920600 83481 93376 85441 95192 91720 87298 98102 74733 78735 95515 FALSE TRUE 89872.36955 88739.08362 88289.5603 87414.5091 88118.61194 90620.18656 85221.08956 84500.8597 85583.22798 92398.35337 0.972662026 0.960396808 0.95553175 0.94606133 0.953681627 0.980755428 0.9223226 0.914527766 0.926241917 1 16.49557952 -7.274208834 24.92956604 0.933650385 0.960133565 0.123729272 0.024071301 1169.172781 2282545.966 0.009586469 0.006509112 5.32E-08 7.274208834 0.02648318 AHLPLGQS(ph)NSCGSVLPPSLAAMAK ddPTM_A459_MK2206_30min_R2 1 AHLPLGQSNSCGSVLPPSLAAMAK 24 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PRT1;A0A1W2PRJ2 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 AHLPLGQS(0.506)NS(0.429)CGS(0.065)VLPPSLAAMAK 71.295 0.0023125 8683500 31941 34759 27674 30289 24695 25367 26777 20604 24266 27291 TRUE FALSE 34386.42752 33032.9186 28596.63735 27814.29181 23725.35022 26332.35896 23261.14774 23297.01354 26376.61282 26400.49691 1.302491678 1.251223366 1.083185572 1.053551829 0.898670593 0.997419066 0.881087497 0.882446025 0.999095317 1 14.68827746 -5.402366534 1.072805841 0.934295715 1.347520048 0.875234944 0.048745038 0.237892536 0.423769856 0.016500066 0.088701475 3.96E-06 5.402366534 0.413224333 AHLPLGQSNS(ph)CGSVLPPSLAAMAK ddPTM_A459_MK2206_30min_R1 2 AHLPLGQSNSCGSVLPPSLAAMAK 24 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PRT1;A0A1W2PRJ2 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 AHLPLGQS(0.311)NS(0.511)CGS(0.179)VLPPSLAAMAK;AHLPLGQS(0.01)NS(0.808)CGS(0.182)VLPPSLAAMAK 133.15 6.69E-08 52704000 19577.7 12161.6 12075.8 8873.1 12266.1 9797.1 10381.6 10093.9 6975.2 7078.1 TRUE FALSE 17912.51381 11369.87763 11256.12834 9556.507699 11777.51526 10351.80334 9689.062406 10005.6501 7700.297001 7954.988465 2.251733474 1.429276445 1.41497733 1.201322634 1.480519465 1.301297089 1.217985727 1.257783106 0.967983428 1 12.95764412 -2.169157848 0.974155327 1.22460216 199.9998801 0.815751242 0.146160448 137.835007 0.893794201 0.046435167 60241.68334 0.006773953 2.169157848 198.7752779 up AHLPLGQSNS(ph)CGSVLPPSLAAMAK ddPTM_A459_MK2206_30min_R2 1 AHLPLGQSNSCGSVLPPSLAAMAK 24 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PRT1;A0A1W2PRJ2 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 AHLPLGQS(0.414)NS(0.573)CGS(0.013)VLPPSLAAMAK 100.95 3.24E-06 29161000 85849 111570 76938 86987 74040 68434 82336 58074 49331 66655 TRUE FALSE 92421.66545 106029.596 79503.07452 79879.88384 71132.81758 71038.30382 71525.1843 65664.4712 53621.72121 64480.05281 1.43333731 1.644378244 1.232987119 1.238830931 1.103175548 1.101709765 1.109260635 1.018368756 0.831601695 1 15.9765653 -5.530810392 0.511109367 0.957063792 1.728268619 0.806851663 0.096516215 0.914610674 0.314275505 0.067439011 0.389633281 2.95E-06 5.530810392 0.771204827 AHLPLGQSNSCGS(ph)VLPPSLAAMAK ddPTM_A459_MK2206_30min_R2 1 AHLPLGQSNSCGSVLPPSLAAMAK 24 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PRT1;A0A1W2PRJ2 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 AHLPLGQS(0.105)NS(0.343)CGS(0.551)VLPPS(0.001)LAAMAK 63.095 0.0029672 21229000 47198 53718 44816 48441 36860 39637 40317 31846 32308 38530 TRUE FALSE 50811.51517 51050.44223 46310.14307 44483.21534 35412.69119 41145.41381 35023.32947 36008.38154 35118.09144 37272.76926 1.363234237 1.369644468 1.242465854 1.193450775 0.950095523 1.103900103 0.939649244 0.966077441 0.942191636 1 15.18583439 -5.874758499 1.057403513 0.970601889 1.390675752 0.901989778 0.05159109 0.154563905 0.342322596 0.019503722 0.047911801 1.33E-06 5.874758499 0.420073863 AHLS(ph)ENELEALEK ddPTM_A459_MK2206_30min_R1 2 AHLSENELEALEK 13 0 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 AHLS(1)ENELEALEK;AHLS(1)ENELEALEK 108.77 0.0040773 14228400 12748.9 13178 12754.7 9910.5 11014.5 11602.2 14092.5 11684.1 14638.8 17546.5 TRUE FALSE 11664.53911 12320.1098 11888.9465 10673.80843 10575.76914 12259.10654 13152.41504 11581.94715 16160.55565 19720.29289 0.591499283 0.62474274 0.602878799 0.541260137 0.536288644 0.621649314 0.66694826 0.587311112 0.819488622 1 14.26739336 -8.480414386 2.222002379 1.000345085 0.594562563 0.923265981 0.037823146 0.077425748 0.855555839 0.039340978 0.010882913 3.31E-09 8.480414386 -0.405782522 AHLS(ph)ENELEALEK ddPTM_A459_MK2206_30min_R2 4 AHLSENELEALEK 13 0 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 AHLS(1)ENELEALEK;AHLS(1)ENELEALEK;AHLS(1)ENELEALEK;AHLS(1)ENELEALEK 190.44 0.00011046 20443100 90828.4 79031.3 80982.7 86584.3 84293.6 73026.6 95118.6 80918.8 63894.8 105679 TRUE FALSE 97782.29214 75106.72056 83682.6228 79510.08572 80983.80972 75805.67844 82629.41356 91495.165 69452.25421 102230.7029 0.956486548 0.734678707 0.818566443 0.777751531 0.792167201 0.741515771 0.808264164 0.894987146 0.679367864 1 16.64146902 -10.57570362 4.587254638 1.000008648 0.799390797 0.387172484 0.075317525 99023561.07 3.955205918 9482.489718 0.016919788 2.66E-11 10.57570362 -0.200617851 AHPLQLEQSSDPSNS(ph)IDGPDHLR ddPTM_A459_MK2206_30min_R2 1 AHPLQLEQSSDPSNSIDGPDHLR 23 0 J3QSA1;J3KSL8;J3QQJ5;Q9Y2L5-2;Q9Y2L5 J3QSA1 TRAPPC8 Trafficking protein particle complex subunit 8 1 AHPLQLEQS(0.003)S(0.001)DPS(0.22)NS(0.776)IDGPDHLR 44.844 0.042244 2961100 6825.1 9954.4 8740.8 11681 7721.3 11266 13020 8654.7 8532.7 8698.1 TRUE FALSE 7347.634904 9460.078971 9032.213909 10726.62493 7418.122966 11694.73552 11310.45836 9785.899006 9274.858822 8414.281709 0.873233766 1.124288359 1.073438497 1.27481172 0.881610959 1.389867362 1.344197728 1.163010622 1.102275767 1 13.0386244 -4.058289654 1.051116198 1.176715691 3.61E-13 0.236379407 0.147124801 10.06331807 3.035700828 0.046150595 19.13444968 8.74E-05 4.058289654 -1.176715691 AHQGTGAGIS(ph)PVILNSGEGK ddPTM_A459_MK2206_30min_R1 2 AHQGTGAGISPVILNSGEGK 20 0 Q8IZD4;Q8IZD4-2;F5GZK9 Q8IZD4 DCP1B mRNA-decapping enzyme 1B 1 AHQGTGAGIS(1)PVILNSGEGK;AHQGTGAGIS(1)PVILNSGEGK 120.85 0.00016456 26693000 11433.9 10766.1 11728.6 10732.1 13618.6 11758.8 12557.7 11494.8 11100 10036.8 TRUE FALSE 10461.38676 10065.22493 10932.49531 11558.6882 13076.14232 12424.57309 11719.99875 11394.30218 12253.88472 11280.23456 0.92740862 0.892288621 0.969172693 1.024685093 1.159208371 1.101446342 1.038985376 1.010112167 1.086314709 1 13.46150945 -5.691121859 2.519572015 1.067913777 0.91256818 0.656027399 0.044952901 0.171884034 2.210260257 0.013861916 0.026884099 2.04E-06 5.691121859 -0.155345597 AHQGTGAGIS(ph)PVILNSGEGK ddPTM_A459_MK2206_30min_R2 3 AHQGTGAGISPVILNSGEGK 20 0 Q8IZD4;Q8IZD4-2;F5GZK9 Q8IZD4 DCP1B mRNA-decapping enzyme 1B 1 AHQGT(0.001)GAGIS(0.999)PVILNSGEGK;AHQGT(0.001)GAGIS(0.999)PVILNSGEGK;AHQGTGAGIS(1)PVILNSGEGK 165.4 2.50E-09 54003000 223088 317561 296592 328378 313026 313848 364475 277462 243095 337314 TRUE FALSE 240167.7888 301791.3825 306480.2292 301548.467 300735.0264 325791.7056 316618.9947 313727.2361 264238.9637 326307.4718 0.736016823 0.924868134 0.939237547 0.924123696 0.921630831 0.998419386 0.970308749 0.961446682 0.809785207 1 18.3158725 -4.759231245 4.484265855 0.940661145 0.718128045 0.589551759 0.050927174 0.146543717 6.441236386 0.012551274 0.10616548 1.74E-05 4.759231245 -0.2225331 AHQLVMEGYNWCHDR ddPTM_A459_MK2206_30min_R1 3 AHQLVMEGYNWCHDR 15 0 P67775;P62714;H0YC23 P67775 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform 0 ;; 114.63 0.0013927 46982700 9047.1 9283.3 9116.8 8259.8 9933.2 8782.5 9581 8547 6933.5 6525.9 FALSE TRUE 8277.596637 8678.955483 8497.977017 8895.971227 9537.53961 9279.75756 8941.868972 8472.27448 7654.262137 7334.37776 1.12860244 1.183325398 1.158650031 1.21291424 1.30038838 1.265241288 1.219172132 1.155145638 1.043614385 1 12.84045886 -8.2242241 2.20687341 1.002453938 1.212327744 0.721287885 0.046427145 0.181522641 1.592915634 0.048508961 0.014279707 5.97E-09 8.2242241 0.209873806 AHS(ph)DSNLSASAAER ddPTM_A459_MK2206_30min_R2 2 AHSDSNLSASAAER 14 0 Q6PEV8 Q6PEV8 FAM199X Protein FAM199X 1 AHS(0.994)DS(0.006)NLSASAAER;AHS(0.979)DS(0.021)NLSASAAER 93.768 0.0092725 5050400 16439.5 21296.4 18999.5 24387 26913 24272 23099 18008.3 24080 25445 TRUE FALSE 17698.12076 20238.85174 19632.93385 22394.50409 25856.26039 25195.68797 20066.07355 20362.04664 26174.43487 24614.73173 0.719005226 0.82222516 0.797609093 0.90980086 1.05043844 1.023601973 0.81520586 0.827230086 1.063364621 1 14.5872344 -5.799786012 3.422572583 0.952435364 0.779571618 0.490481165 0.083362488 0.229787827 5.54364139 0.02575622 0.042739855 1.59E-06 5.799786012 -0.172863745 AHS(ph)GAAPWQPLAAPSGASAQAAEQLQR ddPTM_A459_MK2206_30min_R2 1 AHSGAAPWQPLAAPSGASAQAAEQLQR 27 0 D3YTB5;P51617-4;P51617-2;P51617-3;P51617;H7C3C1;H7C2I6;H7C224 D3YTB5 IRAK1 Interleukin-1 receptor-associated kinase 1 1 AHS(1)GAAPWQPLAAPSGASAQAAEQLQR 86.771 3.51E-05 4644100 12189 15569 12520 15002 16350 13101 18253 12855 15191 16383 TRUE FALSE 13122.19921 14795.8661 12937.41055 13776.28861 15708.01685 13599.56774 15856.35917 14535.19264 16512.28572 15848.42405 0.827981329 0.933585955 0.816321579 0.869252903 0.99114062 0.858102212 1.000500688 0.917138044 1.041888182 1 13.95205177 -7.069470638 0.53238448 1.011377571 0.854996515 0.48897762 0.0545833 0.817635582 0.49352504 0.048285551 0.046714607 8.52E-08 7.069470638 -0.156381056 AHS(ph)HEEASRPAATSTR ddPTM_A459_MK2206_30min_R2 1 AHSHEEASRPAATSTR 16 1 Q96FS4;F6RY50;E9PIB3 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 AHS(0.998)HEEAS(0.001)RPAATSTR 51.939 0.045565 7716500 0 582.4 795.32 2135.3 725.97 764.33 524.65 0 1162.1 738.81 TRUE FALSE 0 553.4788629 821.8355719 1960.83916 697.4647701 793.4171137 455.7628248 0 1263.177357 714.7026902 0 0.774418329 1.149898529 2.743573218 0.975880992 1.110135899 0.637695689 0 1.767416542 1 9.481199408 -7.118739674 4.33824668 0.770325594 1.187584002 0.023171367 0.755537647 0.805091544 24.79341917 0.312597834 0.240383085 7.61E-08 7.118739674 0.417258407 AHS(ph)IQIMK ddPTM_A459_MK2206_30min_R2 1 AHSIQIMK 8 0 M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543 M0R0P7 RPL18A 60S ribosomal protein L18a 1 AHS(1)IQIMK 80.763 0.030005 5605200 89921 109070 98763 119090 124540 111090 124250 89650 99263 122440 TRUE FALSE 96805.4209 103653.7424 102055.7091 109359.966 119649.9338 115317.6078 107935.8257 101367.5628 107896.7163 118444.7928 0.817304151 0.875122831 0.861631032 0.923299061 1.010174707 0.973597953 0.911275398 0.855821184 0.910945207 1 16.85385525 -5.77043475 3.849013043 0.938702928 0.851578783 0.457054163 0.044995726 0.234133234 7.574318979 0.014203118 0.023720218 1.70E-06 5.77043475 -0.087124145 AHS(ph)LLFENSDSFSEDSSTLGR ddPTM_A459_MK2206_30min_R1 2 AHSLLFENSDSFSEDSSTLGR 21 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 AHS(1)LLFENSDSFSEDSSTLGR;AHS(1)LLFENSDSFSEDSSTLGR 202.41 4.73E-17 16811300 3520.1 2819.79 3260.3 2860.4 3357.2 2876.3 3229.8 3476 2400.9 2601 TRUE FALSE 3220.69701 2636.221158 3038.99992 3080.708504 3223.475615 3039.15362 3014.345935 3445.609698 2650.482147 2923.231517 1.101759129 0.901817439 1.039602886 1.053870857 1.102709654 1.039655465 1.031169074 1.178698875 0.90669594 1 11.51334838 -5.501665317 24.70806407 1.053234873 0.994018756 0.034307124 0.079547065 1580.43836 1840791.56 0.019410206 0.03969818 3.15E-06 5.501665317 -0.059216117 AHS(ph)LLFENSDSFSEDSSTLGR ddPTM_A459_MK2206_30min_R2 1 AHSLLFENSDSFSEDSSTLGR 21 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 AHS(1)LLFENSDSFSEDSSTLGR 136.74 2.13E-05 3178900 6265.4 10231 7071.4 8064.4 8854.8 8993.7 9572.8 7886.8 10222 9362.8 TRUE FALSE 6745.083841 9722.943417 7307.156947 7405.512723 8507.11606 9335.961556 8315.879861 8917.631839 11111.09108 9057.292603 0.744713033 1.073493354 0.806770551 0.817629842 0.93925596 1.030767357 0.918141902 0.984580297 1.226756335 1 13.14486415 -7.351437088 0.853808962 1.086261784 0.876685667 0.361445249 0.108157656 0.723404616 1.007724725 0.087322694 0.04824288 4.45E-08 7.351437088 -0.209576117 AHS(ph)PAEGASVESSS(ph)PGPK ddPTM_A459_MK2206_30min_R2 1 AHSPAEGASVESSSPGPK 18 0 C9J4C4;Q8NFG4-3;Q8NFG4-2;Q8NFG4 C9J4C4 FLCN Folliculin 2 AHS(1)PAEGASVES(0.043)S(0.015)S(0.943)PGPK 176.61 8.85E-09 3846200 30626 37400 34467 33032 38096 32333 41535 32003 27304 37656 TRUE FALSE 32970.75011 35542.77038 35616.11258 30333.17994 36600.15962 33563.45497 36081.40461 36185.90198 29678.85257 36427.2878 0.905111308 0.975718274 0.97773166 0.832704869 1.004745668 0.921382211 0.990504833 0.993373489 0.814742309 1 15.15273196 AHS(ph)PAEGASVESSSPGPK ddPTM_A459_MK2206_30min_R1 4 AHSPAEGASVESSSPGPK 18 0 C9J4C4;Q8NFG4-3;Q8NFG4-2;Q8NFG4 C9J4C4 FLCN Folliculin 1 AHS(1)PAEGASVESSSPGPK;AHS(1)PAEGASVESSSPGPK;AHS(1)PAEGASVESSSPGPK;AHS(0.999)PAEGASVESSSPGPK 261.59 1.03E-42 54246400 18830.9 16844.2 20053.2 14960.4 18442.3 16750.8 17338 17346 15031.4 14252.9 TRUE FALSE 17229.23307 15747.63952 18692.04466 16112.6526 17707.70414 17699.21582 16181.41365 17194.34575 16593.96782 16018.65686 1.075572891 0.983081145 1.166892132 1.005867892 1.105442504 1.104912602 1.010160452 1.073394973 1.035915056 1 13.96746556 -8.666661756 0.842835828 1.000082894 1.068204651 0.138729308 0.051913124 1.648979178 2.483818197 0.048062714 0.016889464 2.15E-09 8.666661756 0.068121757 AHS(ph)PASLSFASYR ddPTM_A459_MK2206_30min_R1 2 AHSPASLSFASYR 13 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 AHS(0.964)PAS(0.031)LS(0.004)FASYR;AHS(0.974)PAS(0.026)LSFASYR 103.11 0.0087559 17263200 3991.57 2520.34 3224.53 3064.96 5470.7 4925.7 4288.3 3732.2 2437.44 2160.54 TRUE FALSE 3652.066011 2356.265408 3005.657888 3301.02375 5252.790435 5204.588877 4002.235331 3699.569769 2690.82061 2428.204006 1.504019432 0.970373742 1.237811106 1.359450747 2.163240988 2.143390285 1.648228617 1.523582763 1.108152611 1 11.24567392 -4.438401622 21.66720928 1.500376311 1.750530336 0 0.406100296 239914.272 32416605.08 0.107909128 1396226.484 3.64E-05 4.438401622 0.250154025 AHS(ph)PASLSFASYR ddPTM_A459_MK2206_30min_R2 3 AHSPASLSFASYR 13 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 AHS(0.961)PAS(0.038)LSFASYR;AHS(0.957)PAS(0.039)LS(0.004)FASYR;AHS(0.996)PAS(0.004)LSFASYR 126.09 0.0020632 24696400 32941.5 51390 44323 81721 69603 78895 70377 47259.4 58641.2 49900.5 TRUE FALSE 35463.52657 48838.04733 45800.7067 75044.13289 66870.03649 81897.40451 61136.41536 53436.36585 63741.70558 48272.25077 0.734656578 1.011720948 0.9487999 1.554601902 1.385268667 1.696573149 1.266491916 1.106978958 1.320462679 1 15.55890648 -5.673983286 7.06729372 1.351289637 0.902062669 0.500766592 0.198501489 0.186799836 12.69342187 0.055569028 0.096563897 2.12E-06 5.673983286 -0.449226968 AHS(ph)PGLLGPALGPPYPSGR ddPTM_A459_MK2206_30min_R1 2 AHSPGLLGPALGPPYPSGR 19 0 Q6UXY1;Q6UXY1-2 Q6UXY1 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 AHS(1)PGLLGPALGPPYPSGR;AHS(1)PGLLGPALGPPYPSGR 150.63 1.70E-05 10969000 3002.6 2918.2 3393.9 2494.64 2766.66 2781.2 3425.5 2599.41 2678.72 2977.74 TRUE FALSE 2747.213103 2728.22465 3163.531524 2686.777605 2656.458074 2938.669141 3196.991145 2576.683632 2957.18253 3346.644912 0.820885745 0.815211868 0.945284489 0.802827212 0.793767532 0.878094097 0.955282448 0.769930393 0.883626022 1 11.70849977 -6.97487024 24.23747468 0.887844546 0.838455758 0.164110546 0.06824665 381.6356552 368082.8771 0.024080361 0.021235961 1.06E-07 6.97487024 -0.049388788 AHS(ph)PGLLGPALGPPYPSGR ddPTM_A459_MK2206_30min_R2 3 AHSPGLLGPALGPPYPSGR 19 0 Q6UXY1;Q6UXY1-2 Q6UXY1 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 AHS(1)PGLLGPALGPPYPSGR;AHS(1)PGLLGPALGPPYPSGR;AHS(1)PGLLGPALGPPYPSGR 136.62 0.00011422 13565700 28951.5 37874 30162.2 38626.4 31047.9 35240.6 40091 29085.6 28299.4 39267 TRUE FALSE 31168.0491 35993.23223 31167.79269 35470.49956 29828.80344 36581.70573 34827.00354 32887.18779 30760.83066 37985.72101 0.82052014 0.947546375 0.820513389 0.933785081 0.785263585 0.963038341 0.916844609 0.865777637 0.809799836 1 15.21316958 -6.788432343 24.99989305 0.903062657 0.868040437 0.110183669 0.067293819 709.2384322 656865.5667 0.022967667 0.020261067 1.63E-07 6.788432343 -0.03502222 AHS(ph)SPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR ddPTM_A459_MK2206_30min_R2 3 AHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR 37 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 AHS(0.49)S(0.49)PAS(0.02)LQLGAVSPGTLTPTGVVSGPAATPTAQHLR;AHS(0.484)S(0.484)PAS(0.032)LQLGAVSPGTLTPTGVVSGPAATPTAQHLR;AHS(0.678)S(0.229)PAS(0.094)LQLGAVSPGTLTPTGVVSGPAATPTAQHLR 127 1.51E-29 81922000 11676.7 50714.3 33751.1 84048.7 75592.3 112742.4 65667 51896.9 73650.5 40747 TRUE FALSE 12570.67713 48195.90161 34876.34483 77181.65235 72624.16648 117032.891 57044.84402 58680.00302 80056.48736 39417.42873 0.318911647 1.222705366 0.884795025 1.958059032 1.842437948 2.969064569 1.447198507 1.488681655 2.030992126 1 15.26654605 -5.757153574 23.77519654 1.873195264 0.850193518 0.435473828 0.524213129 54.31704917 301309.5285 0.143594857 0.237582592 1.75E-06 5.757153574 -1.023001746 AHSAPSSGTS(ph)SRPGSIR ddPTM_A459_MK2206_30min_R1 1 AHSAPSSGTSSRPGSIR 17 1 B7Z896;F5H3M2;Q9BVG8-5;Q9BVG8-2;Q9BVG8;Q9BVG8-6 B7Z896 KIFC3 Kinesin-like protein;Kinesin-like protein KIFC3 1 AHSAPSS(0.001)GT(0.071)S(0.46)S(0.46)RPGS(0.008)IR 140.96 0.00027639 10966000 948.94 608.74 1060 591.1 1180.6 930.74 1020.4 815.83 623.82 742.28 TRUE FALSE 868.2276699 569.1109154 988.0501533 636.6266244 1133.574202 983.4376945 952.3309778 808.6972843 688.6683214 834.2392503 1.040741813 0.682191488 1.184372652 0.763122359 1.358811878 1.178843712 1.141556187 0.969382925 0.825504579 1 9.704317381 -3.126050504 10.19354946 1.019774021 1.069208123 0 0.200777494 0 0 0.046181986 0 0.000748083 3.126050504 0.049434103 AHSAPSSGTS(ph)SRPGSIR ddPTM_A459_MK2206_30min_R2 1 AHSAPSSGTSSRPGSIR 17 1 B7Z896;F5H3M2;Q9BVG8-5;Q9BVG8-2;Q9BVG8;Q9BVG8-6 B7Z896 KIFC3 Kinesin-like protein;Kinesin-like protein KIFC3 1 AHSAPS(0.134)S(0.134)GT(0.088)S(0.318)S(0.318)RPGS(0.007)IR 71.842 0.015823 10555000 6441.7 5841.7 5661.4 6101.6 5769.1 6708.8 8145.6 5460.9 5144.8 5087.7 TRUE FALSE 6934.881505 5551.609673 5850.14825 5603.079762 5542.576147 6964.108085 7076.072935 6174.65838 5592.285404 4921.688766 1.409045113 1.127988773 1.188646525 1.138446584 1.126153321 1.414983437 1.437732712 1.254581237 1.136253362 1 12.26493771 -8.520351431 2.911372772 1.001527757 1.257068468 0.341264828 0.115515171 0.313801137 6.514453922 0.121061776 0.03239739 3.02E-09 8.520351431 0.255540711 AHSAPSSGTSSRPGS(ph)IR ddPTM_A459_MK2206_30min_R1 1 AHSAPSSGTSSRPGSIR 17 1 B7Z896;F5H3M2;Q9BVG8-5;Q9BVG8-2;Q9BVG8;Q9BVG8-6 B7Z896 KIFC3 Kinesin-like protein;Kinesin-like protein KIFC3 1 AHSAPSS(0.004)GT(0.094)S(0.017)S(0.058)RPGS(0.827)IR 94.632 0.0036945 10119000 818.58 401.74 886.48 395.11 855.12 988.54 820.34 732.33 476.98 482.56 TRUE FALSE 748.9554725 375.586653 826.3082075 425.5414407 821.0587597 1044.510281 765.6166154 725.927316 526.5637779 542.3431759 1.380962287 0.692525821 1.523589204 0.784635005 1.513910004 1.925921311 1.411682952 1.338501798 0.970905141 1 9.083062218 -5.281576353 24.97293438 1.335074538 1.036743909 0.085373801 0.347469551 1647.980842 2043746.893 0.092803227 0.193563984 5.23E-06 5.281576353 -0.298330629 AHSENEGTALPSADSCT(ph)SPTK ddPTM_A459_MK2206_30min_R1 1 AHSENEGTALPSADSCTSPTK 21 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4 Q8IVL0-3 NAV3 Neuron navigator 3 1 AHSENEGTALPSADS(0.002)CT(0.554)S(0.344)PT(0.1)K 130.27 7.24E-05 6333900 1192.8 814.17 1074 770.05 921.27 744.36 1110.9 1006 916.81 1110 TRUE FALSE 1091.346096 761.167385 1001.099872 829.3593844 884.5738651 786.5050199 1036.793888 997.2046481 1012.11568 1247.51518 0.874815885 0.610146792 0.802475103 0.664809052 0.709068618 0.630457274 0.831087192 0.799352716 0.811305302 1 10.28484166 -8.652828214 0.74247494 0.998341627 0.716516834 0.507378812 0.080311509 0.658670712 0.787270516 0.075466608 0.028149472 2.22E-09 8.652828214 -0.281824792 AHSENEGTALPSADSCTS(ph)PTK ddPTM_A459_MK2206_30min_R1 1 AHSENEGTALPSADSCTSPTK 21 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4 Q8IVL0-3 NAV3 Neuron navigator 3 1 AHSENEGTALPSADS(0.004)CT(0.187)S(0.623)PT(0.187)K 112.26 6.32E-05 5151600 1099.9 708.02 798.67 634.69 712.56 712.41 715.23 796.46 955.34 878.43 TRUE FALSE 1006.347729 661.9277693 744.4585056 683.5739338 684.1772263 752.7460385 667.5183117 789.4966342 1054.651012 987.2565402 1.019337617 0.670471901 0.75406794 0.692397473 0.693008553 0.762462448 0.676134606 0.799687419 1.068264396 1 9.94728121 -8.179425888 4.434159777 1.034128793 0.745129292 0.563651591 0.097283852 0.144862917 5.006250921 0.07026789 0.024063241 6.62E-09 8.179425888 -0.288999501 AHSENEGTALPSADSCTS(ph)PTK ddPTM_A459_MK2206_30min_R2 2 AHSENEGTALPSADSCTSPTK 21 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4 Q8IVL0-3 NAV3 Neuron navigator 3 1 AHSENEGTALPSADS(0.001)CT(0.161)S(0.677)PT(0.161)K;AHSENEGTALPSADS(0.003)CT(0.22)S(0.653)PT(0.123)K 172.2 8.82E-11 19020600 71070 57441 59176 58959 51048 44699 61228 47762 40098 62381 TRUE FALSE 76511.17384 54588.56347 61148.8983 54141.8611 49043.59902 46400.05177 53188.69005 54004.65739 43585.65156 60345.51308 1.26788505 0.904600204 1.01331309 0.897197792 0.812713266 0.768906409 0.881402566 0.894924157 0.722268307 1 15.88095888 -1.522879073 0.816811554 0.848066503 112.1856672 0.650615287 0.08612641 329.2721 1.062768518 0.029478196 67941.57602 0.029999977 1.522879073 111.3376007 AHSEVFTKPSGQQTLS(ph)PDR ddPTM_A459_MK2206_30min_R2 1 AHSEVFTKPSGQQTLSPDR 19 1 F5H212;P15822;A0A0D9SFF3;P15822-2;P15822-3 F5H212 HIVEP1 Zinc finger protein 40 1 AHSEVFTKPS(0.001)GQQT(0.011)LS(0.988)PDR 89.721 0.001568 11462000 15941 22331 18418 19300 17087 22482 19280 18108 16888 22898 TRUE FALSE 17161.45522 21222.07501 19032.04693 17723.12826 16416.07852 23337.56826 16748.51284 20474.77777 18356.88771 22150.84014 0.774754145 0.958070885 0.859202035 0.800110883 0.741104104 1.053574859 0.756111856 0.92433414 0.828721963 1 14.4350738 AHSLGGLDPAFT(ph)STEDLNCK ddPTM_A459_MK2206_30min_R2 1 AHSLGGLDPAFTSTEDLNCK 20 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 AHSLGGLDPAFT(0.518)S(0.382)T(0.1)EDLNCK 158.33 1.76E-06 14249000 66297 44851 58920 51482 50638 38465 60470 52163 32123 66607 TRUE FALSE 71372.74929 42623.76456 60884.36339 47275.75592 48649.69768 39928.81253 52530.21636 58980.8832 34917.00047 64433.61904 1.10769425 0.661514365 0.94491609 0.733712565 0.755035933 0.619689118 0.815260995 0.915374366 0.541906554 1 15.97552601 -4.749308857 24.89969665 0.773319349 1.107695052 0.336849859 0.139400788 600.5359657 1232609.836 0.032468283 0.535690718 1.78E-05 4.749308857 0.334375703 AHSLGGLDPAFTS(ph)TEDLNCK ddPTM_A459_MK2206_30min_R1 2 AHSLGGLDPAFTSTEDLNCK 20 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 AHSLGGLDPAFT(0.121)S(0.758)T(0.121)EDLNCK;AHSLGGLDPAFT(0.146)S(0.769)T(0.084)EDLNCK 186.63 8.29E-16 40087000 10144.9 9719.6 10902.3 7408.3 7921.2 9023.3 11816.9 7980.9 11895.3 14469.3 TRUE FALSE 9282.022982 9086.852273 10162.28225 7978.88855 7605.681831 9534.191448 11028.61616 7911.123833 13131.859 16261.86612 0.570784614 0.558782873 0.624914888 0.490650242 0.467700433 0.58629135 0.678188843 0.486483149 0.807524727 1 13.9892052 -8.484307924 3.476763019 0.998595548 0.560521133 0.841934476 0.062550264 0.076871653 2.10826253 0.062084867 0.016413859 3.28E-09 8.484307924 -0.438074414 AHSLGGLDPAFTS(ph)TEDLNCK ddPTM_A459_MK2206_30min_R2 3 AHSLGGLDPAFTSTEDLNCK 20 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 AHSLGGLDPAFT(0.028)S(0.774)T(0.199)EDLNCK;AHSLGGLDPAFT(0.17)S(0.601)T(0.229)EDLNCK;AHSLGGLDPAFT(0.032)S(0.787)T(0.181)EDLNCK 163.78 1.87E-07 33085900 131188 103324 111625 126059 118992 90860 147625 112328 74182 144733 TRUE FALSE 141231.8541 98193.08041 115346.5218 115759.5765 114319.7762 94317.74097 128241.6602 127009.6553 80634.21627 140010.3741 1.008724211 0.701327177 0.82384268 0.826792852 0.816509326 0.673648232 0.915943986 0.907144604 0.575916012 1 17.0951742 -10.6737164 14.80011649 0.999989867 0.806318754 0.18934 0.120702841 0 0 0.110105754 0.026704568 2.12E-11 10.6737164 -0.193671112 AHSPAEGASVESS(ph)SPGPK ddPTM_A459_MK2206_30min_R2 1 AHSPAEGASVESSSPGPK 18 0 C9J4C4;Q8NFG4-3;Q8NFG4-2;Q8NFG4 C9J4C4 FLCN Folliculin 1 AHSPAEGASVES(0.024)S(0.488)S(0.488)PGPK 113.52 0.0007669 7565900 45667 63937 48414 61827 67590 43002 59317 45830 50757 66181 TRUE FALSE 49163.30063 60761.98155 50028.0986 56775.53633 64936.07699 44638.47124 51528.60665 51820.13836 55171.75211 64021.51939 0.767918367 0.94908684 0.781426293 0.88681957 1.014285159 0.697241672 0.804863851 0.809417503 0.861768865 1 15.9662693 -6.7687479 24.99936481 0.820884863 0.878663412 0.042158438 0.097246256 478.3440935 1636203.18 0.032805871 0.029507382 1.70E-07 6.7687479 0.057778549 AHSPAEGASVESSS(ph)PGPK ddPTM_A459_MK2206_30min_R1 1 AHSPAEGASVESSSPGPK 18 0 C9J4C4;Q8NFG4-3;Q8NFG4-2;Q8NFG4 C9J4C4 FLCN Folliculin 1 AHSPAEGASVES(0.001)S(0.018)S(0.981)PGPK 133.35 0.00029059 5895600 5275.2 5014.3 5046.4 3827.3 4931.6 3831.1 4662.2 4336.6 4204.1 4069.5 TRUE FALSE 4826.516539 4687.868159 4703.864428 4122.079309 4735.163929 4048.013571 4351.193145 4298.685563 4641.13124 4573.660383 1.055285293 1.02497076 1.028468236 0.901264843 1.035311661 0.885070869 0.951359039 0.93987861 1.014752048 1 12.15913353 -5.632517995 8.626888678 0.958182727 1.036737205 0.368220438 0.04511411 0.25194198 18.20053265 0.011640488 0.020195798 2.33E-06 5.632517995 0.078554477 AHSPAEGASVESSS(ph)PGPK ddPTM_A459_MK2206_30min_R2 1 AHSPAEGASVESSSPGPK 18 0 C9J4C4;Q8NFG4-3;Q8NFG4-2;Q8NFG4 C9J4C4 FLCN Folliculin 1 AHSPAEGASVES(0.001)S(0.179)S(0.82)PGPK 154.46 2.92E-05 7957800 58233 65861 51096 69902 59441 51601 74828 54390 48135 60359 TRUE FALSE 62691.36325 62590.43851 52799.51514 64190.78299 57107.04767 53564.71221 65002.99372 61498.95975 52321.69529 58389.49077 1.073675458 1.071946984 0.904264011 1.099355075 0.978036405 0.917369059 1.113265296 1.053253915 0.896080692 1 15.83342111 -5.069365889 24.9993463 1.000745421 1.073248805 0.150844417 0.072713926 284.0672308 102376.6016 0.018209245 0.048177217 8.52E-06 5.069365889 0.072503384 AHSSPASLQLGAVS(ph)PGTLTPTGVVSGPAATPTAQHLR ddPTM_A459_MK2206_30min_R2 1 AHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR 37 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 AHSSPASLQLGAVS(0.748)PGT(0.222)LT(0.028)PT(0.001)GVVSGPAATPTAQHLR 78.45 8.99E-07 4526200 1606 5454.5 3188.6 8115.9 9112 13273 7367 4038.3 7088.3 3460.8 TRUE FALSE 1728.956595 5183.637462 3294.906333 7452.805009 8754.217096 13778.11332 6399.704051 4566.119676 7704.827521 3347.874379 0.516434131 1.548336907 0.984178604 2.226130423 2.614858296 4.115480975 1.911572337 1.363886203 2.301408789 1 11.70902968 -5.782281577 6.84231303 2.320711179 1.066858911 0.306918987 0.817545804 0.196376004 35.94122943 0.240902143 0.373151219 1.65E-06 5.782281577 -1.253852267 AHSTMTGS(ph)GVDAR ddPTM_A459_MK2206_30min_R1 2 AHSTMTGSGVDAR 13 0 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 AHSTMT(0.013)GS(0.987)GVDAR;AHSTMT(0.026)GS(0.974)GVDAR 187.62 0.00014228 6473300 1060.72 969.1 1445.74 815.27 1975.02 1841.57 1680.6 1691.32 937.67 844.39 TRUE FALSE 970.5001939 906.0114139 1347.607197 878.0622367 1896.350771 1945.838102 1568.49024 1676.532968 1035.144152 948.999408 1.022656269 0.954701769 1.420029544 0.925250563 1.998263387 2.050410238 1.65278316 1.766632259 1.090774286 1 9.890263377 -6.250525907 24.92501093 1.657320788 1.095903253 0.335950057 0.345725275 757.9710221 1731110.672 0.102152752 0.130586768 5.62E-07 6.250525907 -0.561417535 AHSTMTGS(ph)GVDAR ddPTM_A459_MK2206_30min_R2 2 AHSTMTGSGVDAR 13 0 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 AHS(0.001)T(0.015)MT(0.066)GS(0.918)GVDAR;AHSTMT(0.354)GS(0.646)GVDAR 101.04 0.019532 3996800 5455.7 9415.7 8963.2 15678.4 13798.2 15119 13089.6 9435.1 13330 9213.7 TRUE FALSE 5873.392587 8948.13003 9262.028614 14397.42457 13256.41334 15694.36414 11370.9198 10668.29997 14489.4193 8913.057724 0.658964944 1.003934935 1.039152769 1.615318223 1.487302534 1.760828284 1.275759694 1.196929303 1.625639568 1 13.12170473 -5.396532206 1.954165408 1.43922687 0.766690097 0.525937919 0.229334934 0.27660504 1.979222528 0.065361102 0.208382528 4.01E-06 5.396532206 -0.672536774 AHT(ph)PLNTPDPSTK ddPTM_A459_MK2206_30min_R1 3 AHTPLNTPDPSTK 13 0 Q9BYW2;H7C3H4;A0A1W2PPX9 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 AHT(1)PLNTPDPSTK;AHT(0.995)PLNT(0.004)PDPSTK;AHT(0.999)PLNT(0.001)PDPSTK 139.34 0.0012741 40696100 20064.6 21833.9 24566 19029.4 17538.6 16658.6 21681.5 21913.7 24753.7 24788.4 TRUE FALSE 18358.00041 20412.50914 22898.52836 20495.04769 16840.00042 17601.79554 20235.1667 21722.11083 27326.9357 27859.37413 0.658952363 0.732698051 0.82193262 0.735660736 0.60446442 0.631808721 0.726332422 0.779705629 0.980888356 1 14.76587523 -8.176641775 2.349220638 1.007111873 0.702462658 0.795567017 0.057795978 0.148751092 1.465696333 0.058824378 0.017732642 6.66E-09 8.176641775 -0.304649215 AHT(ph)PLNTPDPSTK ddPTM_A459_MK2206_30min_R2 4 AHTPLNTPDPSTK 13 0 Q9BYW2;H7C3H4;A0A1W2PPX9 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 AHT(1)PLNTPDPSTK;AHT(0.999)PLNT(0.001)PDPSTK;AHT(0.982)PLNT(0.01)PDPS(0.006)T(0.002)K;AHT(1)PLNTPDPSTK 147.75 0.00076574 58219700 318347 381921 352704 394402 360012 279398 458488 349303 280725 435458 TRUE FALSE 342719.8911 362955.3585 364462.9753 362178.095 345876.12 290030.6867 398287.9749 394958.1014 305141.9531 421249.0411 0.813580228 0.861617056 0.865195976 0.859771915 0.821072777 0.688501714 0.945492894 0.937588132 0.724374238 1 18.68431388 -11.07382557 3.374728593 1.00490793 0.839141919 0.290073245 0.077107532 115129703.9 126122676.2 5010796.013 0.019365098 8.44E-12 11.07382557 -0.165766011 AHT(ph)PTPGIYMGR ddPTM_A459_MK2206_30min_R1 4 AHTPTPGIYMGR 12 0 Q13595;Q13595-4;Q13595-3;Q13595-2 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(1)PTPGIYMGR;AHT(0.85)PT(0.149)PGIY(0.001)MGR;AHT(0.998)PT(0.002)PGIYMGR;AHT(1)PTPGIYMGR 111.88 0.0089658 248023000 11005.7 12788.8 12438.4 8640.4 10151 10939 13407.7 8773.6 14414.2 16997 TRUE FALSE 10069.60742 11956.2468 11594.11606 9305.885105 9746.664175 11558.35673 12513.2968 8696.89334 15912.60767 19102.71668 0.527129601 0.625892484 0.606935456 0.487149826 0.510223982 0.605063506 0.655053258 0.455269975 0.833002339 1 14.2214902 -8.465415962 4.108825464 0.9980463 0.56460598 0.847982595 0.062355072 0.068505556 2.353657085 0.060582352 0.015877957 3.42E-09 8.465415962 -0.43344032 AHT(ph)PTPGIYMGR ddPTM_A459_MK2206_30min_R2 2 AHTPTPGIYMGR 12 0 Q13595;Q13595-4;Q13595-3;Q13595-2 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.499)PT(0.499)PGIY(0.002)MGR;AHT(0.999)PT(0.001)PGIYMGR 132.03 0.004541 109966000 195489 166562 137644 203142 158742 141597 198294 157328 120622 230955 TRUE FALSE 210455.7881 158290.7733 142232.9823 186544.6488 152508.9915 146985.5731 172257.7596 177891.3098 131113.4835 223418.9573 0.941978204 0.708493027 0.636620025 0.834954433 0.682614373 0.657892127 0.771007804 0.796222988 0.586850306 1 17.76939208 -10.77675484 5.579662773 1.000018308 0.733461901 0.38941449 0.099459261 2.18E-05 2.92E-06 0.092715527 0.022485275 1.67E-11 10.77675484 -0.266556407 AHT(ph)PTPGIYMGRPTHSGGGGGGGGGGGGGGGGR ddPTM_A459_MK2206_30min_R1 9 AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 33 1 Q13595;Q13595-4;Q13595-3 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.989)PT(0.01)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.835)PT(0.165)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.751)PT(0.243)PGIY(0.004)MGRPT(0.002)HSGGGGGGGGGGGGGGGGR;AHT(0.804)PT(0.194)PGIY(0.001)MGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.777)PT(0.197)PGIY(0.025)MGRPT(0.001)HSGGGGGGGGGGGGGGGGR;AHT(0.494)PT(0.494)PGIY(0.012)MGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.738)PT(0.237)PGIY(0.025)MGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.812)PT(0.185)PGIY(0.003)MGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.774)PT(0.211)PGIY(0.015)MGRPTHSGGGGGGGGGGGGGGGGR 105.63 5.62E-14 94395500 13100.32 12480.61 13830.867 11409.927 13626.12 12231.85 12432.56 12764.994 11016.44 9489.41 TRUE FALSE 11986.06899 11668.12002 12892.06628 12288.72155 13083.36279 12924.40678 11603.20661 12653.391 12161.63836 10665.02975 1.123866437 1.094054146 1.20881672 1.15224447 1.22675352 1.211849107 1.08796758 1.186437478 1.140328592 1 13.38060037 -8.569911814 17.24042018 0.999999999 1.162013169 0.523442764 0.04594979 274.8886949 100764.1585 0.045657575 0.011788735 2.69E-09 8.569911814 0.16201317 AHT(ph)PTPGIYMGRPTHSGGGGGGGGGGGGGGGGR ddPTM_A459_MK2206_30min_R2 8 AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 33 1 Q13595;Q13595-4;Q13595-3 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.496)PT(0.496)PGIY(0.003)MGRPT(0.004)HS(0.002)GGGGGGGGGGGGGGGGR;AHT(0.547)PT(0.435)PGIY(0.013)MGRPT(0.003)HS(0.002)GGGGGGGGGGGGGGGGR;AHT(0.488)PT(0.488)PGIY(0.024)MGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.498)PT(0.498)PGIY(0.004)MGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.437)PT(0.437)PGIY(0.119)MGRPT(0.006)HS(0.001)GGGGGGGGGGGGGGGGR;AHT(0.825)PT(0.172)PGIY(0.003)MGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.339)PT(0.339)PGIY(0.292)MGRPT(0.027)HS(0.003)GGGGGGGGGGGGGGGGR;AHT(0.468)PT(0.468)PGIY(0.052)MGRPT(0.01)HS(0.001)GGGGGGGGGGGGGGGGR 96.287 1.15E-10 160138200 39522.1 56997.6 49789.2 73066.6 56747.3 61916.6 55501.6 45285.9 53129.1 55231.7 TRUE FALSE 42547.94236 54167.18207 51449.14708 67096.82505 54519.11587 64272.8796 48214.17325 51204.92262 57750.17308 53429.49415 0.796338109 1.013806755 0.962935321 1.255801241 1.020393637 1.20294756 0.902388728 0.958364353 1.080866926 1 15.70534874 -4.517091556 1.713874808 1.053266622 0.533384052 0.343407951 0.1038087 2.460341197 4.080247503 0.028790752 2.610857271 3.04E-05 4.517091556 -0.519882571 AHTLLS(ph)PPSANNATFAR ddPTM_A459_MK2206_30min_R2 2 AHTLLSPPSANNATFAR 17 0 C9IZD2;C9J8Z7;C9JLE1;F8W8R3;A0A087WWF6;P49005;C9JHC7 C9IZD2 POLD2 DNA polymerase delta subunit 2 1 AHT(0.07)LLS(0.93)PPSANNATFAR;AHT(0.02)LLS(0.98)PPSANNATFAR 97.256 0.0037469 7084200 17376 23597 14683 26085 24375 24149 27543 18052.8 17289 28725 TRUE FALSE 18706.31992 22425.20729 15172.52389 23953.77206 23417.91503 25068.00712 23926.57101 20412.36294 18792.76597 27787.7056 0.673186919 0.807019033 0.546015713 0.862027704 0.842743743 0.902125835 0.861048816 0.734582525 0.676297865 1 14.7621591 -5.798211068 24.99992223 0.832374244 0.688567992 0.351025684 0.101628874 205.9340059 140007.2019 0.028809403 0.042732576 1.59E-06 5.798211068 -0.143806252 AHTLLSPPSANNAT(ph)FAR ddPTM_A459_MK2206_30min_R1 1 AHTLLSPPSANNATFAR 17 0 C9IZD2;C9J8Z7;C9JLE1;F8W8R3;A0A087WWF6;P49005;C9JHC7 C9IZD2 POLD2 DNA polymerase delta subunit 2 1 AHT(0.005)LLS(0.029)PPS(0.071)ANNAT(0.896)FAR 112.03 0.0046482 0 714.83 794.64 836.44 745.21 816.17 683.11 916.4 778.85 683.89 524.07 TRUE FALSE 654.0299548 742.9087916 779.6647833 802.6062033 783.6602206 721.7870979 855.2686281 772.0405966 754.9828128 588.9957481 1.110415409 1.261314354 1.323718865 1.362668926 1.330502339 1.225453834 1.45207946 1.310774482 1.281813689 1 9.202113409 -8.801900581 4.034327284 1.000001122 1.302625265 0.522164257 0.084758789 5.03169619 72.23216043 0.083366381 0.021819943 1.58E-09 8.801900581 0.302624143 AHTPT(ph)PGIYMGRPTHSGGGGGGGGGGGGGGGGR ddPTM_A459_MK2206_30min_R1 1 AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 33 1 Q13595;Q13595-4;Q13595-3 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.189)PT(0.808)PGIY(0.003)MGRPTHSGGGGGGGGGGGGGGGGR 89.968 1.98E-08 3018600 359.54 455.64 325.75 471.01 372.05 415.11 500.61 274.19 209.94 236.94 TRUE FALSE 328.959235 425.9777532 303.6389976 507.2872718 357.2304607 438.6131695 467.2152203 271.7927857 231.7640143 266.293916 1.235323885 1.599652593 1.140240086 1.904990093 1.341489381 1.647101729 1.754509556 1.020649626 0.870331616 1 8.056875658 -7.857772073 6.505653826 0.942441942 1.518383452 0.567368572 0.222129054 0.150782822 8.555163841 0.118422118 0.056329874 1.39E-08 7.857772073 0.575941509 AHTPT(ph)PGIYMGRPTHSGGGGGGGGGGGGGGGGR ddPTM_A459_MK2206_30min_R2 3 AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 33 1 Q13595;Q13595-4;Q13595-3 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.127)PT(0.862)PGIY(0.008)MGRPT(0.002)HS(0.001)GGGGGGGGGGGGGGGGR;AHT(0.244)PT(0.671)PGIY(0.079)MGRPT(0.005)HS(0.001)GGGGGGGGGGGGGGGGR;AHT(0.06)PT(0.93)PGIY(0.011)MGRPTHSGGGGGGGGGGGGGGGGR 94.834 1.35E-10 22155400 13040.7 31584.1 21564.2 36463.4 33925.9 54419.8 30266.1 22914.1 37255.7 27795.4 TRUE FALSE 14039.10602 30015.67952 22283.13967 33484.22358 32593.7987 56490.78362 26292.12471 25909.05155 40496.13344 26888.43837 0.522124261 1.116304305 0.828725691 1.245301907 1.212186377 2.100932112 0.977822674 0.963575913 1.506079783 1 14.71469835 -4.587020747 0.824171708 1.299517192 3.96E-11 0.294259812 0.339108833 4.392282306 1.851931846 0.128731722 5.617108011 2.59E-05 4.587020747 -1.299517192 AHWEVER ddPTM_A459_MK2206_30min_R2 1 AHWEVER 7 0 Q13033-2;Q13033;G3V340 Q13033-2 STRN3 Striatin-3 0 107.43 0.032635 0 7593.4 7973.6 9088 10596 8026.2 9887.9 7190.4 6361.1 6810.8 8385.4 FALSE TRUE 8174.756542 7577.642619 9390.989384 9730.272905 7711.05106 10264.19096 6246.291843 7192.517611 7403.191073 8111.785085 1.007762959 0.934152291 1.157697016 1.199523015 0.95059854 1.26534306 0.770026792 0.88667507 0.912646353 1 12.98580371 -7.274503197 24.99521348 0.882893317 1.081236439 0.416580939 0.111885634 788.0573285 1507797.206 0.046410442 0.031506283 5.31E-08 7.274503197 0.198343122 AIAELGIYPAVDPLDSTSR ddPTM_A459_MK2206_30min_R1 1 AIAELGIYPAVDPLDSTSR 19 0 P06576;H0YH81 P06576 ATP5B "ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta" 0 134.9 0.0041813 0 1350.7 1413.8 1262.6 1206.5 1427.1 1381.5 1423.5 1325.2 1382.4 1441.7 FALSE TRUE 1235.815872 1321.761363 1176.89823 1299.424839 1370.255585 1459.719336 1328.540912 1313.613916 1526.105427 1620.30868 0.762703976 0.815746641 0.726341989 0.80196129 0.845675643 0.90088966 0.819930751 0.810718311 0.941860922 1 10.66205297 -10.92751121 0.090929948 1.340139715 0.615601818 0.708685791 0.042442856 44.70483475 0.69223707 4.732459539 1.408091784 1.18E-11 10.92751121 -0.724537897 AICDHVR ddPTM_A459_MK2206_30min_R1 2 AICDHVR 7 0 A0A5K1VW95;P40925;P40925-3;B9A041;P40925-2;B8ZZ51 A0A5K1VW95 MDH1 "Malate dehydrogenase, cytoplasmic" 0 ; 131.04 0.0057333 21944600 4252 4149.6 3994.4 3683.9 5060.2 4504.5 5539.7 5839.3 2476.04 4286.2 FALSE TRUE 3890.345072 3879.460286 3723.271257 3967.634616 4858.641519 4759.540897 5170.156721 5788.247616 2733.433219 4817.206815 0.807593533 0.805333969 0.772910817 0.823638006 1.008601396 0.98802918 1.073268581 1.201577561 0.567431153 1 12.23398115 -6.206150549 4.892115206 0.989155777 0.797518375 0.228832584 0.152194714 0.29867174 15.49097553 0.04466184 0.05748827 6.22E-07 6.206150549 -0.191637402 AICDHVR ddPTM_A459_MK2206_30min_R2 4 AICDHVR 7 0 A0A5K1VW95;P40925;P40925-3;B9A041;P40925-2;B8ZZ51 A0A5K1VW95 MDH1 "Malate dehydrogenase, cytoplasmic" 0 ;;; 181.2 3.34E-06 34404300 60761.9 85191 74251 85685 77988 87801 82764 66261 75761 84432 FALSE TRUE 65413.87778 80960.53882 76726.49128 78684.26141 74925.79926 91142.32858 71896.98738 74921.54021 82350.55484 81676.99075 0.800885013 0.991228228 0.939389301 0.963358967 0.917342798 1.115887446 0.880259994 0.917290653 1.008246681 1 16.31764209 -4.756244748 24.98609432 0.966641922 0.800884753 0.398603126 0.062292623 170.0151407 817679.6104 0.015092724 0.124495619 1.75E-05 4.756244748 -0.165757169 AIDS(ph)PGGAVR ddPTM_A459_MK2206_30min_R2 2 AIDSPGGAVR 10 0 O60346 O60346 PHLPP1 PH domain leucine-rich repeat-containing protein phosphatase 1 1 AIDS(1)PGGAVR;AIDS(1)PGGAVR 123.67 0.0040806 7488500 27630 41218 27834 39024 37858 41699 39119 33053 34508 33900 TRUE FALSE 29745.37404 39171.17406 28761.97167 35835.61437 36371.5047 43285.88466 33982.62831 37373.14059 37509.44346 32793.84578 0.907041347 1.194467228 0.877053941 1.092754251 1.109095437 1.319939264 1.036250171 1.139638847 1.143795202 1 15.00113748 -5.987438576 24.9228626 1.133810685 1.008330224 0.212581658 0.111781745 343.2533185 681035.5807 0.030134342 0.044666978 1.03E-06 5.987438576 -0.125480461 AIEALHGHELRPGR ddPTM_A459_MK2206_30min_R1 1 AIEALHGHELRPGR 14 1 Q96PK6;A0A0A6YYI9;F8WDX3;A0A0A0MSL8;B8ZZ74;Q96PK6-3;Q96PK6-4;Q96PK6-2;Q96PK6-5 Q96PK6 RBM14;RBM14-RBM4 RNA-binding protein 14 0 71.558 0.043323 8052400 1751.5 2870.7 2408.4 2551.8 1629.7 1352.4 1631.1 1862 2009.9 2316.6 FALSE TRUE 1602.525728 2683.816908 2244.924518 2748.340078 1564.785598 1428.971719 1522.292295 1845.72073 2218.836297 2603.597897 0.61550431 1.030810829 0.862239334 1.055593139 0.601008934 0.548845012 0.584687941 0.708911592 0.852219269 1 11.34629094 -6.273558698 24.96521237 0.686473139 0.898963792 0.192081639 0.169261515 1007.479705 2075355.705 0.051440233 0.058766684 5.33E-07 6.273558698 0.212490652 AIEPPPLDAVIEAEHTLR ddPTM_A459_MK2206_30min_R1 2 AIEPPPLDAVIEAEHTLR 18 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ; 231.06 9.27E-19 8756400 6703.4 5987 6498 5750.1 6236.8 6017.5 6089.5 5763.6 5057.6 4947 FALSE TRUE 6133.240629 5597.245212 6056.933864 6192.973698 5988.375049 6358.20565 5683.280566 5713.209453 5583.355619 5559.871708 1.103126286 1.006722008 1.089401731 1.113869892 1.077070725 1.143588555 1.02219635 1.027579367 1.004223822 1 12.44083588 -7.420857293 8.9335632 1.014488554 1.085808023 0.548229927 0.033552814 0.298421442 23.90526929 0.014534472 0.009775388 3.79E-08 7.420857293 0.071319469 AIEPPPLDAVIEAEHTLR ddPTM_A459_MK2206_30min_R2 4 AIEPPPLDAVIEAEHTLR 18 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ;;; 178.02 1.60E-09 3586180 25674.4 32965.7 27476.3 28710.9 34112.1 32887.3 32242.8 23119.6 30016 28003.7 FALSE TRUE 27640.0518 31328.67127 28392.34613 26365.12763 32772.68755 34138.84925 28009.28163 26141.4111 32626.73742 27089.94156 1.020306808 1.156468765 1.048077053 0.973244168 1.209773284 1.260203872 1.033936584 0.96498588 1.20438567 1 14.72546966 -10.99193796 2.994932732 0.997544935 1.095906937 0.078154465 0.099711724 18750541.33 24024048.66 389726.3496 0.026436666 1.02E-11 10.99193796 0.098362002 AIEPQKEEADENYNS(ph)VNTR ddPTM_A459_MK2206_30min_R1 2 AIEPQKEEADENYNSVNTR 19 1 C9JFM5;Q12846-2;Q12846 C9JFM5 STX4 Syntaxin-4 1 AIEPQKEEADENY(0.009)NS(0.987)VNT(0.004)R;AIEPQKEEADENYNS(0.999)VNT(0.001)R 126.9 0.00019763 28369000 4316.9 4586.3 3365.5 4205.7 4206.4 3791.4 4795.2 4653.9 5827.9 5451.9 TRUE FALSE 3949.724986 4287.731036 3137.059237 4529.623743 4038.850181 4006.065792 4475.320957 4613.211443 6433.73106 6127.322532 0.644608631 0.699772374 0.5119788 0.739250092 0.659154167 0.653803643 0.730387691 0.75289189 1.05000692 1 12.58104108 -8.115094558 2.209486016 1.034902899 0.658840164 0.837936591 0.062426494 0.116060936 1.011913335 0.053513722 0.016699642 7.67E-09 8.115094558 -0.376062735 AIEPQKEEADENYNS(ph)VNTR ddPTM_A459_MK2206_30min_R2 2 AIEPQKEEADENYNSVNTR 19 1 C9JFM5;Q12846-2;Q12846 C9JFM5 STX4 Syntaxin-4 1 AIEPQKEEADENYNS(0.997)VNT(0.003)R;AIEPQKEEADENYNS(0.973)VNT(0.027)R 136.53 9.56E-05 25750000 47486 31593 39291 26542.3 28622.1 32147.9 53746 26037.7 41553 35814 TRUE FALSE 51121.56467 30024.13756 40600.94233 24373.70919 27498.25254 33371.31086 46689.08564 29440.91679 45167.20483 34645.39211 1.475566058 0.866612722 1.171900211 0.703519507 0.793705912 0.963225088 1.347627572 0.849778715 1.303700206 1 15.08037586 -9.311338503 15.99842902 0.999991731 1.033037579 0 0.248868648 0 0 0.235080913 0.057015496 4.88E-10 9.311338503 0.033045848 AIEQADLLQEEDES(ph)PR ddPTM_A459_MK2206_30min_R2 2 AIEQADLLQEEDESPR 16 0 A0A2R8YGH5;H7C1E4;P61966 A0A2R8YGH5 AP1S1 AP-1 complex subunit sigma-1A 1 AIEQADLLQEEDES(1)PR;AIEQADLLQEEDES(1)PR 207.16 7.36E-08 7787200 22364 22622 25259 26541 25391 23029 33004 23339 22100 26356 TRUE FALSE 24076.20503 21498.62438 26101.12245 24372.5154 24394.02176 23905.38473 28670.53516 26389.48743 24022.21805 25496.00588 0.944312813 0.843215384 1.023733779 0.955934648 0.956778167 0.937612928 1.124510847 1.035043981 0.942195345 1 14.63798364 AIGALASS(ph)R ddPTM_A459_MK2206_30min_R1 2 AIGALASSR 9 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 AIGALAS(0.048)S(0.952)R;AIGALAS(0.327)S(0.673)R 94.409 0.023293 32700000 9712 10630.8 9412.9 8776.8 11149.1 9269.9 10045 9207.2 8443.1 7627 TRUE FALSE 8885.9434 9938.732988 8773.978574 9452.790657 10705.00774 9794.753727 9374.916378 9126.702421 9320.790459 8571.890341 1.03663755 1.159456385 1.02357569 1.102766167 1.24885029 1.14265971 1.093681324 1.064724589 1.087366974 1 13.06539768 -8.55453081 0.999457117 1.003311928 1.118355403 0.234051481 0.061047555 0.927712615 2.029085667 0.061090062 0.020285667 2.79E-09 8.55453081 0.115043475 AIGGIILTAS(ph)HNPGGPNGDFGIK ddPTM_A459_MK2206_30min_R1 4 AIGGIILTASHNPGGPNGDFGIK 23 0 A0A3B3ITK7;P36871;P36871-2 A0A3B3ITK7 PGM1 Phosphoglucomutase-1 1 AIGGIILTAS(1)HNPGGPNGDFGIK;AIGGIILT(0.013)AS(0.987)HNPGGPNGDFGIK;AIGGIILT(0.094)AS(0.906)HNPGGPNGDFGIK;AIGGIILT(0.24)AS(0.76)HNPGGPNGDFGIK 192.51 1.51E-22 1175710100 23583.16 24198.79 22801.46 21331.51 23459.6 22625.53 24009.34 20573.63 20817.18 18348.26 TRUE FALSE 21577.2884 22623.44437 21253.76042 22974.4666 22525.15446 23906.56796 22407.72074 20393.75692 22981.20036 20621.38097 1.046355161 1.097086776 1.030666203 1.114109022 1.092320368 1.159309747 1.086625613 0.988961746 1.114435565 1 14.33185333 -9.109636951 0.679573841 0.99967043 1.08609617 0.204586722 0.0462469 3.257061598 2.35524197 0.059364798 0.01790452 7.77E-10 9.109636951 0.08642574 AIGGIILTAS(ph)HNPGGPNGDFGIK ddPTM_A459_MK2206_30min_R2 5 AIGGIILTASHNPGGPNGDFGIK 23 0 A0A3B3ITK7;P36871;P36871-2 A0A3B3ITK7 PGM1 Phosphoglucomutase-1 1 AIGGIILT(0.016)AS(0.984)HNPGGPNGDFGIK;AIGGIILT(0.005)AS(0.995)HNPGGPNGDFGIK;AIGGIILTAS(1)HNPGGPNGDFGIK;AIGGIILT(0.292)AS(0.708)HNPGGPNGDFGIK;AIGGIILT(0.006)AS(0.994)HNPGGPNGDFGIK 156.79 1.27E-09 771425600 570350 683261 601150 775011 701967 639050 758303 591267 541274 628685 TRUE FALSE 614016.4345 649331.2523 621192.041 711690.1222 674404.2485 663369.4956 658736.9052 668547.627 588353.0341 608171.0599 1.009611399 1.067678644 1.021410064 1.170213726 1.108905525 1.090761365 1.083144116 1.099275633 0.967413731 1 19.21411764 -8.261373707 24.99999999 0.983706856 1.083170496 0.450940711 0.043072075 5.434950007 2071135.368 0.035198311 0.011322016 5.48E-09 8.261373707 0.099463641 AIGSTSKPQES(ph)PK ddPTM_A459_MK2206_30min_R2 3 AIGSTSKPQESPK 13 1 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 AIGS(0.002)T(0.002)S(0.013)KPQES(0.983)PK;AIGSTSKPQES(1)PK;AIGSTSKPQES(1)PK 115.1 0.019318 165371000 351105 262989 279062 197663 216534 158262 306806 228434 178020 311795 TRUE FALSE 377985.8688 249929.3487 288365.7878 181513.3006 208031.7872 164284.7713 266522.0037 258291.1081 193503.8578 301621.1547 1.253180896 0.828620091 0.956052927 0.60179234 0.68971219 0.544672576 0.883631667 0.856342813 0.641546041 1 18.20237809 -3.498836291 1.082973321 0.745929831 7.734118244 0.49613924 0.144765969 19.10718894 1.966060751 0.044106059 280.8745455 0.000317076 3.498836291 6.988188413 AIGSTSKPQES(ph)PKGK ddPTM_A459_MK2206_30min_R1 1 AIGSTSKPQESPKGK 15 2 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 AIGS(0.009)T(0.009)S(0.009)KPQES(0.974)PKGK 74.793 0.045105 25596000 4662.2 4936.9 4962.6 5032.1 3126 2773.4 3480.1 3781.7 3471.9 2304 TRUE FALSE 4265.655408 4615.506913 4625.752539 5419.673214 3001.484801 2930.427511 3247.948879 3748.636996 3832.816429 2589.436914 1.647329342 1.782436516 1.786393217 2.092992953 1.159126443 1.131685231 1.254307012 1.447664925 1.480173704 1 11.3384227 -6.272280765 24.91915253 1.262626437 1.821163276 0.739641962 0.168903584 379.2553825 871724.7294 0.054636199 0.062557088 5.34E-07 6.272280765 0.55853684 AIGSTSKPQES(ph)PKGK ddPTM_A459_MK2206_30min_R2 1 AIGSTSKPQESPKGK 15 2 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 AIGS(0.05)T(0.05)S(0.05)KPQES(0.849)PKGK 50.46 0.047803 63400000 188400 251480 261400 214720 268330 158610 307880 220190 208930 271010 TRUE FALSE 202824.0489 238991.8689 270114.9455 197176.6891 257794.0159 164646.0147 267454.9862 248969.589 227102.3537 262166.9659 0.773644567 0.911601765 1.03031648 0.752103487 0.983319981 0.628019683 1.020170429 0.949660413 0.866250837 1 18.00012639 -8.569666118 0.678235378 0.994127709 0.869378451 0.088202531 0.121984547 2.263659147 2.360923858 0.119911511 0.047753584 2.69E-09 8.569666118 -0.124749259 AIGSVPERS(ph)PAGVDLSLTGLPPPVSR ddPTM_A459_MK2206_30min_R1 1 AIGSVPERSPAGVDLSLTGLPPPVSR 26 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 AIGS(0.008)VPERS(0.992)PAGVDLSLTGLPPPVSR 82.294 6.69E-05 8962400 1094.1 966.53 1008.4 1150.4 1328.6 869.7 1071.4 1210.4 833.05 731.56 TRUE FALSE 1001.04105 903.6087213 939.9526176 1239.004007 1275.679049 918.9416624 999.9288609 1199.8176 919.6485286 822.1911758 1.217528331 1.099025078 1.143228783 1.506953667 1.551560131 1.117673954 1.216175617 1.459292724 1.118533689 1 9.683330078 -8.515687083 20.80555426 0.999999973 1.28583629 0.273505886 0.155763178 65.37312039 189121.4091 0.161696191 0.041749777 3.05E-09 8.515687083 0.285836316 AIGSVPERS(ph)PAGVDLSLTGLPPPVSR ddPTM_A459_MK2206_30min_R2 2 AIGSVPERSPAGVDLSLTGLPPPVSR 26 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 AIGS(0.003)VPERS(0.997)PAGVDLSLTGLPPPVSR;AIGS(0.011)VPERS(0.894)PAGVDLS(0.083)LT(0.011)GLPPPVS(0.001)R 85.013 5.14E-05 6318700 22557 23705 23451 31268 28600 25675 26808 19933.1 23901.2 26037.9 TRUE FALSE 24283.98126 22527.84417 24232.84464 28713.30438 27477.0203 26652.08012 23288.0774 22538.42461 25980.08317 25188.28546 0.964098224 0.894377833 0.962068049 1.139946759 1.090865051 1.058114105 0.924559849 0.894797887 1.031435157 1 14.6204653 -5.53225716 24.99502364 1.018827236 0.928984226 0.224513367 0.069725521 315.7485171 841518.9168 0.021520021 0.037335692 2.94E-06 5.53225716 -0.08984301 AIGVKPPR ddPTM_A459_MK2206_30min_R2 1 AIGVKPPR 8 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 106.42 0.038712 4018600 27317 34849 32413 35576 33164 36741 35866 30450 34388 31586 FALSE TRUE 29408.41052 33118.44934 33493.63324 32669.327 31861.81472 38139.2045 31156.75112 34429.91955 37379.00608 30555.35141 0.962463502 1.083883765 1.096162593 1.069185118 1.042757267 1.248200487 1.019682304 1.126804896 1.2233211 1 14.89913745 -3.673139476 0.983457627 1.111230608 6.31E-17 0.22612525 0.076756832 21.43483203 3.086567689 0.023887203 41.71317653 0.000212256 3.673139476 -1.111230608 AILDAEPGPRPALQPS(ph)PSIR ddPTM_A459_MK2206_30min_R1 1 AILDAEPGPRPALQPSPSIR 20 1 B5MD46;Q9BXI6;Q9BXI6-2 B5MD46 TBC1D10A TBC1 domain family member 10A 1 AILDAEPGPRPALQPS(0.784)PS(0.216)IR 63.374 0.011249 17047000 3931.9 3522.5 3870.7 2854.1 3814.5 3184.5 4068.4 3252.2 3744.2 3898.7 TRUE FALSE 3597.471258 3293.18461 3607.967668 3073.923277 3662.560388 3364.803638 3797.004459 3223.766358 4133.422989 4381.70039 0.821021735 0.751576858 0.823417246 0.701536619 0.8358765 0.767921888 0.866559582 0.735734092 0.943337659 1 12.09727512 -8.407039804 4.366639465 0.997662816 0.788944352 0.704497082 0.048117879 0.105499882 3.052402107 0.042649255 0.011173806 3.92E-09 8.407039804 -0.208718464 AILDAEPGPRPALQPS(ph)PSIR ddPTM_A459_MK2206_30min_R2 1 AILDAEPGPRPALQPSPSIR 20 1 B5MD46;Q9BXI6;Q9BXI6-2 B5MD46 TBC1D10A TBC1 domain family member 10A 1 AILDAEPGPRPALQPS(0.989)PS(0.011)IR 62.916 0.012014 16288000 48866 64390 50030 65893 45452 57981 63219 42819 50838 50167 TRUE FALSE 52607.21853 61192.48623 51697.97523 60509.33112 43667.3261 60187.50758 54918.26936 48415.59032 55259.79735 48530.0549 1.084013168 1.26091937 1.065277493 1.246842421 0.899799644 1.240210993 1.13163419 0.997641367 1.138671643 1 15.56659087 -14.52287871 0.048021154 0.471066006 1.3865269 0.118650463 0.107536563 1209.967127 4.289970366 82.58842102 19.49958241 3.00E-15 14.52287871 0.915460894 AILDAEPGPRPALQPSPS(ph)IR ddPTM_A459_MK2206_30min_R2 1 AILDAEPGPRPALQPSPSIR 20 1 B5MD46;Q9BXI6;Q9BXI6-2 B5MD46 TBC1D10A TBC1 domain family member 10A 1 AILDAEPGPRPALQPS(0.368)PS(0.632)IR 89.502 0.0010042 7064700 20435 22468 20795 27224 24878 24377 24375 22298 23926 23910 TRUE FALSE 21999.51931 21352.27179 21488.29492 24999.71211 23901.16472 25304.68382 21174.53322 25212.42516 26007.04023 23129.81866 0.951132373 0.923149122 0.929029978 1.080843412 1.033348556 1.09402863 0.915464731 1.090039898 1.124394472 1 14.49746633 -5.752484873 24.90175891 1.047801705 0.933308312 0.46495419 0.055969088 164.5475369 457588.0373 0.015353285 0.026096867 1.77E-06 5.752484873 -0.114493393 AILGSYDSELTPAEYS(ph)PQLTR ddPTM_A459_MK2206_30min_R1 3 AILGSYDSELTPAEYSPQLTR 21 0 C9J9H5;C9JX80;Q9Y6D9-3;Q9Y6D9 C9J9H5 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 1 AILGSYDSELT(0.013)PAEY(0.044)S(0.692)PQLT(0.251)R;AILGSYDSELT(0.001)PAEYS(0.97)PQLT(0.029)R;AILGSYDSELT(0.001)PAEY(0.008)S(0.98)PQLT(0.011)R 144.26 4.15E-06 17083600 4006.4 3791.8 3998.2 3235.06 3995.2 3628.6 3801.9 3351.08 3408.12 2833.53 TRUE FALSE 3665.634642 3544.953131 3726.813324 3484.224882 3836.062724 3834.048196 3548.282188 3321.781861 3762.40627 3184.569088 1.151061428 1.113165716 1.170272404 1.094096182 1.20457827 1.20394568 1.114211088 1.043086763 1.181449096 1 11.63688246 -9.979868475 0.440648924 0.969668821 1.149635402 0.42676426 0.049043699 8.095934632 1.485399988 0.429046272 0.029260266 1.05E-10 9.979868475 0.179966581 AILILDNDGDR ddPTM_A459_MK2206_30min_R2 1 AILILDNDGDR 11 0 F8VXB1;F8VUC5;F8W156;F8W651;F8VXR1;F8VYZ4;F8VVA7;P61923-5;P61923;P61923-4 F8VXB1 COPZ1 Coatomer subunit zeta-1 0 139.43 0.01619 2429400 19064 17159 16967 18736 16536 16967 18483 16453 13728 19213 FALSE TRUE 20523.5545 16306.90901 17532.67131 17205.20887 15886.71355 17612.69107 16056.1599 18603.46359 14922.03663 18586.08138 1.104243228 0.877372087 0.943322638 0.925703945 0.854764015 0.947627997 0.863880856 1.000935227 0.802860825 1 14.18193501 -4.755100389 24.99848667 0.912051167 1.104243547 0.47229767 0.060657039 172.5586707 680439.2168 0.013531476 0.124109283 1.76E-05 4.755100389 0.19219238 AILVDLEPGT(ph)MDSVR ddPTM_A459_MK2206_30min_R1 1 AILVDLEPGTMDSVR 15 0 P07437;Q5JP53;A0A0B4J269;Q13509;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q9BVA1;Q13885 P07437;A0A0B4J269;Q9BVA1 TUBB;TUBB3;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-2A chain 1 AILVDLEPGT(0.914)MDS(0.086)VR 123.72 0.0029764 0 712.68 644.96 744.07 543.75 683.54 723.82 686.3 543.83 466.08 613.6 TRUE FALSE 652.0628236 602.9729868 693.5646015 585.6297192 656.3131544 764.8020629 640.5181792 539.0753516 514.5306839 689.6174004 0.945542881 0.874358719 1.005723755 0.849209604 0.951706198 1.109023732 0.92880223 0.781702073 0.746110356 1 9.429652367 -7.655921298 6.07331089 0.823954679 0.954729623 0.228211569 0.091156642 0.267929396 13.41879446 0.043812999 0.024840334 2.21E-08 7.655921298 0.130774943 AILVDLEPGTMDS(ph)VR ddPTM_A459_MK2206_30min_R1 2 AILVDLEPGTMDSVR 15 0 P07437;Q5JP53;A0A0B4J269;Q13509;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q9BVA1;Q13885 P07437;A0A0B4J269;Q9BVA1 TUBB;TUBB3;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-2A chain 1 AILVDLEPGT(0.1)MDS(0.9)VR;AILVDLEPGTMDS(1)VR 165.24 8.77E-05 9499900 2394.72 2872.3 2582.83 2423.73 3127.48 2994.13 2665.16 2061.73 2095.12 2023.6 TRUE FALSE 2191.036489 2685.312748 2407.514696 2610.406105 3002.905849 3163.655053 2487.372039 2043.704512 2312.915221 2274.298845 0.963389879 1.18072115 1.05857447 1.147785002 1.320365551 1.391046326 1.093687421 0.898608605 1.016979464 1 11.15120612 -7.536500908 10.17722745 0.973618521 1.182397447 0.383537213 0.116306097 0.307116556 212.2933367 0.058389273 0.034246363 2.91E-08 7.536500908 0.208778925 AILVDLEPGTMDS(ph)VR ddPTM_A459_MK2206_30min_R2 1 AILVDLEPGTMDSVR 15 0 P07437;Q5JP53;A0A0B4J269;Q13509;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q9BVA1;Q13885 P07437;A0A0B4J269;Q9BVA1 TUBB;TUBB3;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-2A chain 1 AILVDLEPGT(0.01)MDS(0.99)VR 129.01 0.0010955 0 2402.5 3683.7 2825.7 3735.5 3576.7 3974.3 4185.9 3411.1 3867.2 2935.6 TRUE FALSE 2586.437247 3500.772815 2919.907428 3430.297701 3436.260787 4125.544771 3636.286302 3856.942482 4203.562066 2839.811612 0.910777756 1.232748257 1.028204623 1.20793143 1.210031247 1.452752976 1.280467439 1.358168431 1.480225677 1 11.47157951 -6.151547969 1.602206105 1.33221616 1.069907341 0.341516685 0.146447238 0.401075984 2.050866007 0.048820986 0.072442462 7.05E-07 6.151547969 -0.262308819 AIMAIVVSRSGNT(ph)LLAAWAS(ph)R ddPTM_A459_MK2206_30min_R1 1 AIMAIVVSRSGNTLLAAWASR 21 1 A0A6I8PRE6;Q6IWH7-3;Q6IWH7 A0A6I8PRE6 ANO7 Anoctamin-7 2 AIMAIVVSRS(0.001)GNT(0.999)LLAAWAS(1)R 57.708 0.016105 2488500 407.53 179.23 213.19 195.24 821.53 1315.5 1074.3 603.55 125.34 276.25 TRUE FALSE 372.8674335 167.5620944 198.7192568 210.2774186 788.8067205 1389.982473 1002.635407 598.273226 138.3695415 310.4739356 1.200962112 0.539697782 0.640051334 0.677278813 2.540653595 4.476969928 3.229370624 1.926967637 0.445672006 1 8.278328348 -6.261363866 24.99852519 2.474610524 0.739551308 0.311876949 1.069629269 8.042398225 2662392.523 0.348844476 0.421989237 5.48E-07 6.261363866 -1.735059216 AIMGAAHEPS(ph)PPGGLDAR ddPTM_A459_MK2206_30min_R1 1 AIMGAAHEPSPPGGLDAR 18 0 Q96JF0-2;Q96JF0 Q96JF0-2 ST6GAL2 "Beta-galactoside alpha-2,6-sialyltransferase 2" 1 AIMGAAHEPS(1)PPGGLDAR 93.181 0.010139 0 1772.6 1740.5 1521 1238.1 1358.1 1073.1 1449.4 1682.6 1412.7 1672.6 TRUE FALSE 1621.831062 1627.193134 1417.758758 1333.458677 1304.004001 1133.857995 1352.713171 1667.889206 1559.55522 1879.814315 0.86276131 0.865613758 0.75420149 0.709356592 0.693687664 0.603175529 0.719599356 0.887262743 0.829632591 1 10.87637445 -8.405103079 1.287362256 0.987751098 0.744622708 0.460476274 0.081462207 0.428368153 1.514914801 0.086840744 0.026969451 3.93E-09 8.405103079 -0.24312839 AIPGDQHPES(ph)PVHTEPMGIQGR ddPTM_A459_MK2206_30min_R1 1 AIPGDQHPESPVHTEPMGIQGR 22 0 Q14676-3;Q14676 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 AIPGDQHPES(1)PVHTEPMGIQGR 87.356 0.0002825 7396200 4250.2 4275.5 3931.6 4068.7 4438.3 3962.2 4402.5 3750.6 3626.3 2932.2 TRUE FALSE 3888.698171 3997.164173 3664.733946 4382.071979 4261.513113 4186.53634 4108.817258 3717.8089 4003.266862 3295.463073 1.180015702 1.212929438 1.11205432 1.329728746 1.29314546 1.270393947 1.246810286 1.128159781 1.214781284 1 11.68626549 -9.060421339 0.839739152 0.999320712 1.232530227 0.520481845 0.064335975 1.583163698 1.696632285 0.071294176 0.022754077 8.70E-10 9.060421339 0.233209515 AIPGDQHPES(ph)PVHTEPMGIQGR ddPTM_A459_MK2206_30min_R2 3 AIPGDQHPESPVHTEPMGIQGR 22 0 Q14676-3;Q14676 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 AIPGDQHPES(0.946)PVHT(0.054)EPMGIQGR;AIPGDQHPES(0.992)PVHT(0.008)EPMGIQGR;AIPGDQHPES(0.999)PVHT(0.001)EPMGIQGR 106.72 4.03E-05 90226000 100300 125489 101728 120667 120460 111623 134988 104344 97167 137309 TRUE FALSE 107979.0451 119257.3987 105119.5607 110808.1201 115730.1351 115870.8915 117263.9135 117982.1191 105618.41 132828.6186 0.812920034 0.897829098 0.791392411 0.83421872 0.8712741 0.872333784 0.882821147 0.888228157 0.795147997 1 17.01920649 -11.38238901 2.4547987 1.066776931 0.852252757 0.593433207 0.037293625 13115069.21 7697439.21 5116605.063 0.009316789 4.15E-12 11.38238901 -0.214524174 AIPNGFGTS(ph)PLTPSAR ddPTM_A459_MK2206_30min_R2 1 AIPNGFGTSPLTPSAR 16 0 A6NIZ0;Q9GZM8-3;Q9GZM8;Q9GZM8-2;J3QSD2;J3QRZ1 A6NIZ0 NDEL1 Nuclear distribution protein nudE-like 1 1 AIPNGFGT(0.009)S(0.896)PLT(0.061)PS(0.034)AR 104.94 0.0037548 1324400 11399 13226 13633 13099 11213 10451 14473 11470 10170 13783 TRUE FALSE 12271.7162 12569.21607 14087.51742 12028.7698 10772.72128 10848.72013 12572.67771 12969.16838 11054.56822 13333.26184 0.920383651 0.94269626 1.056569472 0.902162572 0.807958428 0.813658373 0.942955885 0.972692844 0.829097062 1 13.70274214 -5.972208958 24.99274948 0.88811434 0.971698098 0.203766102 0.069863187 330.6487347 297353.4128 0.020297984 0.030106148 1.07E-06 5.972208958 0.083583757 AIPTVNHSGTFS(ph)PQAPVPTTVPVVDVR ddPTM_A459_MK2206_30min_R1 2 AIPTVNHSGTFSPQAPVPTTVPVVDVR 27 0 Q16513-3;Q16513-2;Q16513;Q16513-4;B1AL79;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 AIPTVNHSGT(0.001)FS(0.999)PQAPVPTTVPVVDVR;AIPTVNHS(0.004)GT(0.058)FS(0.922)PQAPVPT(0.006)T(0.009)VPVVDVR 150.86 3.64E-14 54125000 3680.4 2782.7 3122.5 2483.82 3070 2581.15 3301.3 2631.8 2484.4 2275.9 TRUE FALSE 3367.362653 2601.545724 2910.5534 2675.124247 2947.715399 2727.292482 3081.076301 2608.79045 2742.662271 2557.855674 1.316478755 1.017080733 1.137888048 1.045846438 1.152416623 1.066241739 1.204554398 1.019913077 1.072250596 1 11.32071915 -1.522878747 0.062334829 0.870987223 1.594918626 0.247021816 0.082322589 519.9332729 2.424385919 5.51766739 33.87109062 0.03 1.522878747 0.723931403 AIPTVNHSGTFS(ph)PQAPVPTTVPVVDVR ddPTM_A459_MK2206_30min_R2 2 AIPTVNHSGTFSPQAPVPTTVPVVDVR 27 0 Q16513-3;Q16513-2;Q16513;Q16513-4;B1AL79;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 AIPT(0.003)VNHS(0.281)GT(0.121)FS(0.594)PQAPVPTTVPVVDVR;AIPTVNHSGT(0.003)FS(0.997)PQAPVPTTVPVVDVR 122.63 5.14E-12 26154000 39748 48246 40171 47268 53541 54439 45091.4 37278 45385 40859 TRUE FALSE 42791.13744 45850.1738 41510.28109 43406.0532 51438.71132 56510.71429 39170.84502 42150.36259 49332.50526 39525.77418 1.082613518 1.160006977 1.05020792 1.098170854 1.301396681 1.429718088 0.991020311 1.066401948 1.248109779 1 15.2705061 -11.05581897 2.869731699 0.992775435 1.158231207 0.124208437 0.126360279 32533463.16 34614744.02 1822001.794 0.033540074 8.79E-12 11.05581897 0.165455772 AIPVS(ph)PSAVEEDEDEDGHTVVATAR ddPTM_A459_MK2206_30min_R1 4 AIPVSPSAVEEDEDEDGHTVVATAR 25 0 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 AIPVS(0.5)PS(0.5)AVEEDEDEDGHTVVATAR;AIPVS(0.5)PS(0.5)AVEEDEDEDGHTVVATAR;AIPVS(0.5)PS(0.5)AVEEDEDEDGHTVVATAR;AIPVS(0.5)PS(0.5)AVEEDEDEDGHTVVATAR 242.36 2.20E-45 448030000 26648.9 23891 26309 23104.2 27598.5 24838.4 26672 24265.4 20663.8 19287.9 TRUE FALSE 24382.27112 22335.69156 24523.21838 24883.68949 26499.1933 26244.72874 24892.75955 24053.25017 22811.87596 21677.43067 1.124776801 1.030366186 1.131278829 1.147907696 1.222432386 1.2106937 1.148326106 1.109598759 1.052333014 1 14.40390615 -8.325593032 1.896036428 1.002705272 1.145350475 0.488614881 0.049296344 0.321275017 2.237943431 0.053715132 0.015569317 4.73E-09 8.325593032 0.142645203 AIPVS(ph)PSAVEEDEDEDGHTVVATAR ddPTM_A459_MK2206_30min_R2 7 AIPVSPSAVEEDEDEDGHTVVATAR 25 0 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 AIPVS(0.715)PS(0.285)AVEEDEDEDGHTVVATAR;AIPVS(0.5)PS(0.5)AVEEDEDEDGHTVVATAR;AIPVS(0.549)PS(0.451)AVEEDEDEDGHTVVATAR;AIPVS(0.937)PS(0.063)AVEEDEDEDGHTVVATAR;AIPVS(0.5)PS(0.5)AVEEDEDEDGHTVVATAR;AIPVS(0.5)PS(0.5)AVEEDEDEDGHTVVATAR;AIPVS(0.5)PS(0.5)AVEEDEDEDGHTVVATAR 194.11 2.22E-27 227168550 341607.3 348216.2 361179.21 401361.3 357627.5 384876.6 428697.1 298589.69 337138.53 326906.3 TRUE FALSE 367761.0175 330924.2899 373220.7446 368568.7979 343585.2474 399523.3487 372408.6558 337616.3877 366462.2299 316239.3742 1.162919761 1.046436076 1.1801843 1.165474093 1.08647207 1.263357385 1.177616344 1.067597571 1.158812785 1 18.27065748 -9.443819994 0.897712529 0.998216628 1.147432423 0.341523268 0.060401665 6.469361759 5.302662705 0.098182296 0.019555387 3.60E-10 9.443819994 0.149215794 AIPVSPS(ph)AVEEDEDEDGHTVVATAR ddPTM_A459_MK2206_30min_R1 4 AIPVSPSAVEEDEDEDGHTVVATAR 25 0 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 AIPVS(0.122)PS(0.878)AVEEDEDEDGHTVVATAR;AIPVS(0.414)PS(0.586)AVEEDEDEDGHTVVATAR;AIPVS(0.134)PS(0.866)AVEEDEDEDGHTVVATAR;AIPVS(0.375)PS(0.625)AVEEDEDEDGHTVVATAR 255.21 1.14E-53 458416400 17200.3 16234.7 15600.2 13116.6 17230.4 14121.6 15484 14374.4 13079.4 11294.6 TRUE FALSE 15737.32416 15177.81808 14541.30189 14126.8428 16544.07668 14921.15279 14451.09061 14248.72614 14439.05044 12693.86032 1.239758731 1.195681826 1.145538199 1.112887841 1.303313276 1.175462185 1.138431513 1.122489596 1.137483009 1 13.63184325 -8.831561265 0.531794081 0.994177414 1.195993419 0.561919342 0.050726068 1.134990001 0.661293928 0.069546002 0.026612056 1.47E-09 8.831561265 0.201816004 AIPVSPS(ph)AVEEDEDEDGHTVVATAR ddPTM_A459_MK2206_30min_R2 4 AIPVSPSAVEEDEDEDGHTVVATAR 25 0 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 AIPVS(0.146)PS(0.854)AVEEDEDEDGHTVVATAR;AIPVS(0.418)PS(0.582)AVEEDEDEDGHTVVATAR;AIPVS(0.041)PS(0.959)AVEEDEDEDGHTVVATAR;AIPVS(0.025)PS(0.975)AVEEDEDEDGHTVVATAR 199.57 3.06E-31 360290900 570315 709308 615356 789797 704460 785507 776607 591260 649153 632005 TRUE FALSE 613978.7549 674084.7962 635871.6619 725268.0587 676799.3608 815400.0193 674637.568 668539.7121 705615.1545 611382.7286 1.004246156 1.1025578 1.040054997 1.18627502 1.106997841 1.333698159 1.103461934 1.093488057 1.15413001 1 19.22171627 -5.75272683 24.97274342 1.148824962 1.054313442 0.192762799 0.083465363 295.4931283 846961.3904 0.022373914 0.038009728 1.77E-06 5.75272683 -0.094511519 AIQEGANSIVSSLHQAAAAACLS(ph)R ddPTM_A459_MK2206_30min_R1 2 AIQEGANSIVSSLHQAAAAACLSR 24 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 AIQEGANSIVSSLHQAAAAACLS(1)R;AIQEGANSIVSSLHQAAAAACLS(1)R 187.57 2.25E-26 14175700 2929.4 1424.17 2092.46 1509.99 2889.5 2809.77 2917.4 2046.14 1430.28 1413.08 TRUE FALSE 2680.239147 1331.456274 1950.429645 1626.289691 2774.405096 2968.856749 2722.785569 2028.250814 1578.962724 1588.143019 1.687656033 0.83837303 1.228119648 1.024019671 1.74694915 1.869388786 1.714446078 1.277121009 0.994219479 1 10.63312512 -6.247761901 24.83443691 1.48336648 1.17149985 0.091851034 0.344917228 1457.876073 2647089.867 0.105174894 0.135009773 5.65E-07 6.247761901 -0.311866631 AIQEGANSIVSSLHQAAAAACLS(ph)R ddPTM_A459_MK2206_30min_R2 1 AIQEGANSIVSSLHQAAAAACLSR 24 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 AIQEGANSIVSSLHQAAAAACLS(1)R 108.73 5.10E-05 0 2194.4 2875.9 3507.8 5320.6 4365 5564.9 3862.4 3272.3 4914.3 4198 TRUE FALSE 2362.404951 2733.086988 3624.748301 4885.88996 4193.608168 5776.676169 3355.26224 3700.000845 5341.736931 4061.019604 0.581727049 0.673005121 0.892570993 1.203119028 1.032649082 1.422469412 0.826211781 0.911101449 1.315368418 1 11.98762628 -5.392972468 2.480639805 1.096582382 0.606493976 0.549173585 0.171153662 0.225049206 2.644509963 0.048052346 0.13039913 4.05E-06 5.392972468 -0.490088406 AIS(ph)ETEENSDELSGER ddPTM_A459_MK2206_30min_R1 2 AISETEENSDELSGER 16 0 A7UKX8;F5GWH7;J3KN53;E7EPE2;Q00987-8;Q00987-9;Q00987;Q00987-11 A7UKX8 mdm2;MDM2 E3 ubiquitin-protein ligase Mdm2 1 AIS(0.975)ET(0.025)EENSDELSGER;AIS(0.995)ET(0.005)EENSDELSGER 254.72 5.74E-30 16805000 2516.8 3064.6 2700.5 2632.3 3155.9 3090.9 4060.2 3960.9 3261.2 3443.3 TRUE FALSE 2302.732944 2865.093983 2517.197584 2835.040202 3030.19382 3265.904087 3789.351466 3926.270269 3600.21341 3869.882 0.595039576 0.740356937 0.650458485 0.732590865 0.783019694 0.843928597 0.979190442 1.014571057 0.930316069 1 11.91807386 -6.773210209 1.047880849 0.994112512 0.66709789 0.909323327 0.042857442 0.135485355 0.317581215 0.023090157 0.020687469 1.69E-07 6.773210209 -0.327014622 AIS(ph)ETEENSDELSGER ddPTM_A459_MK2206_30min_R2 2 AISETEENSDELSGER 16 0 A7UKX8;F5GWH7;J3KN53;E7EPE2;Q00987-8;Q00987-9;Q00987;Q00987-11 A7UKX8 mdm2;MDM2 E3 ubiquitin-protein ligase Mdm2 1 AIS(1)ETEENSDELSGER;AIS(0.5)ET(0.5)EENSDELSGER 285.19 3.56E-63 47913000 48835 57808 58951 56371 49179 56837 65366 63679 67067 78646 TRUE FALSE 52573.84515 54937.33878 60916.39692 51765.30898 47247.98536 58999.97186 56783.36568 72002.06394 72900.36643 76079.78746 0.691035647 0.722101633 0.800690945 0.68040817 0.621032037 0.775501271 0.746365987 0.946402012 0.958209386 1 16.2152256 -7.758281268 2.328307033 0.981939794 0.713705054 0.849960261 0.048049284 0.11655087 1.256152772 0.033636846 0.014501852 1.74E-08 7.758281268 -0.26823474 AIS(ph)PTSATSSGR ddPTM_A459_MK2206_30min_R1 3 AISPTSATSSGR 12 0 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3 A0A087WY00 MYO5A Unconventional myosin-Va 1 AIS(0.54)PT(0.23)S(0.23)ATSSGR;AIS(0.625)PT(0.187)S(0.187)ATSSGR;AIS(0.884)PT(0.09)S(0.026)ATSSGR 148.13 0.00061112 41873600 9806.4 7824.6 10160.1 7876.8 10830 9710.2 10601.2 9431 7793.2 8518.1 TRUE FALSE 8972.314185 7315.217118 9470.46072 8483.472501 10398.61817 10259.98313 9894.013291 9348.545761 8603.331028 9573.386536 0.93721424 0.764120104 0.989248756 0.886151674 1.086200597 1.071719302 1.033491467 0.976513977 0.898671645 1 13.22481365 -6.239630281 24.29186969 1.014075784 0.891683775 0.387535458 0.071919338 601.4543571 669923.8721 0.021946913 0.028305405 5.76E-07 6.239630281 -0.12239201 AIS(ph)PTSATSSGR ddPTM_A459_MK2206_30min_R2 4 AISPTSATSSGR 12 0 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3 A0A087WY00 MYO5A Unconventional myosin-Va 1 AIS(0.808)PT(0.096)S(0.096)ATSSGR;AIS(0.853)PT(0.102)S(0.03)AT(0.014)S(0.001)SGR;AIS(0.986)PT(0.005)S(0.005)AT(0.002)SS(0.001)GR;AIS(0.844)PT(0.119)S(0.037)ATSSGR 126.5 0.0027261 64003000 109814 140270 127916 151199 110031 123375 136432 108903 118353 121758 TRUE FALSE 118221.4443 133304.3958 132180.6556 138845.558 105710.6301 128070.1221 118518.3145 123136.996 128647.13 117785.0464 1.003705036 1.131759929 1.122219328 1.17880463 0.897487697 1.087320725 1.006225477 1.045438277 1.092219547 1 16.84579687 -6.229793155 24.99868136 1.026252911 1.1116747 0.299327431 0.065420371 878.3205564 693822.2286 0.018870746 0.024360382 5.89E-07 6.229793155 0.085421789 AIS(ph)PTSSSR ddPTM_A459_MK2206_30min_R1 1 AISPTSSSR 9 0 A0A0U1RRL2;B1AM27;O14795;O14795-2 A0A0U1RRL2 UNC13B Protein unc-13 homolog B 1 AIS(0.656)PT(0.335)S(0.009)SSR 126.03 0.0049031 19495000 3917.4 3773.2 3851.7 3360.4 4061.1 3068.7 3849.1 3809.3 2953.2 2988.2 TRUE FALSE 3584.204559 3527.563994 3590.257335 3619.21859 3899.337787 3242.447142 3592.333562 3775.995692 3260.195708 3358.400776 1.067235508 1.05037017 1.069037788 1.077661313 1.161069821 0.965473557 1.069656007 1.124343384 0.970758383 1 11.71355869 -10.34103667 9.340497155 1.000009564 1.064247936 0.095584048 0.056494461 0 0 0.052521472 0.012738328 4.56E-11 10.34103667 0.064238372 AIS(ph)PTSSSR ddPTM_A459_MK2206_30min_R2 2 AISPTSSSR 9 0 A0A0U1RRL2;B1AM27;O14795;O14795-2 A0A0U1RRL2 UNC13B Protein unc-13 homolog B 1 AIS(0.995)PT(0.005)SSSR;AIS(0.792)PT(0.2)S(0.006)S(0.002)S(0.001)R 118.23 0.0072794 38115000 79208 90168 68199 95139 86619 98247 97825 68019 85790 79032 TRUE FALSE 85272.22538 85690.38824 70472.72062 87365.83937 83217.90283 101985.8584 84980.45999 76909.31684 93251.85913 76453.19231 1.115352058 1.120821586 0.921776037 1.142736316 1.088481727 1.333964683 1.111535796 1.005966063 1.219724858 1 16.22228912 AIS(ph)SANLLVR ddPTM_A459_MK2206_30min_R1 3 AISSANLLVR 10 0 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 AIS(0.689)S(0.311)ANLLVR;AIS(0.5)S(0.5)ANLLVR;AIS(0.5)S(0.5)ANLLVR 158.34 0.00047709 32117200 6675.1 5293.5 4946.1 4654.9 5439.5 3909.7 5747.3 4097.6 5743.8 4955.7 TRUE FALSE 6107.347693 4948.892188 4610.372513 5013.421205 5222.833197 4131.063835 5363.908104 4061.775115 6340.888564 5569.64953 1.096540754 0.888546427 0.827767077 0.900132257 0.937731031 0.741709835 0.963060256 0.729269426 1.138471735 1 12.44337083 -8.27871015 24.99568121 1.069235877 0.88377393 0.325936925 0.105610434 1050.839879 1520847.117 0.095546796 0.024909756 5.26E-09 8.27871015 -0.185461948 AIS(ph)SANLLVR ddPTM_A459_MK2206_30min_R2 2 AISSANLLVR 10 0 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 AIS(0.5)S(0.5)ANLLVR;AIS(0.5)S(0.5)ANLLVR 150.14 0.00072139 28653400 45404 51783 39397 47312 37396 42693 37827 36582 29374.5 35108 TRUE FALSE 48880.16515 49211.53152 40710.47632 43446.45826 35927.64514 44317.71203 32860.26946 41363.393 31929.44091 33962.42884 1.439242328 1.44899918 1.198691546 1.279250623 1.057864422 1.304904082 0.967547687 1.217916222 0.94014009 1 15.05165202 -1.522878745 0.230103163 0.985810412 3.827052318 0.649882741 0.10526635 29.30315391 0.383635169 0.141445621 31.36135742 0.03 1.522878745 2.841241906 AIS(ph)SDMFFGR ddPTM_A459_MK2206_30min_R1 1 AISSDMFFGR 10 0 Q8N6H7;E9PMU9;H0YDN9;A0A0D9SF70;G5E9L0;Q8N6H7-3;Q8N6H7-2 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 1 AIS(0.961)S(0.039)DMFFGR 128.88 0.0030428 3742400 1764 1319.1 1282.2 1301.6 1132.7 1584.1 1175.5 1027.7 1198.3 842.41 TRUE FALSE 1613.962537 1233.22635 1195.167836 1401.849458 1087.58216 1673.790373 1097.08454 1018.714927 1322.867573 946.7741107 1.704696525 1.302556055 1.262357962 1.480658841 1.148724018 1.767887772 1.158760603 1.075985196 1.397236741 1 9.886876446 -12.06749198 0.064238316 2.17E-11 1.954172952 0.289413667 0.206534146 286.9701006 2.220971166 59.5920698 17.91274444 8.56E-13 12.06749198 1.954172952 AIS(ph)SDMFFGR ddPTM_A459_MK2206_30min_R2 3 AISSDMFFGR 10 0 Q8N6H7;E9PMU9;H0YDN9;A0A0D9SF70;G5E9L0;Q8N6H7-3;Q8N6H7-2 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 1 AIS(0.994)S(0.006)DMFFGR;AIS(0.96)S(0.04)DMFFGR;AIS(0.953)S(0.047)DMFFGR 123.62 0.0040969 4353600 9025.4 9934.6 9479.2 10247.3 13078.8 10408.6 10975.5 11782.5 9929.5 8270.7 TRUE FALSE 9716.391563 9441.26221 9795.231797 9410.062811 12565.2606 10804.70657 9534.403666 13322.51321 10793.14996 8000.827736 1.214423293 1.180035681 1.224277302 1.17613616 1.57049508 1.350448594 1.191677159 1.665141863 1.349004168 1 12.96593355 -6.20313105 24.99921838 1.379378964 1.199209148 0.153333887 0.173454807 431.9840281 185209.0864 0.049127936 0.06342388 6.26E-07 6.20313105 -0.180169816 AIS(ph)SPTVSR ddPTM_A459_MK2206_30min_R1 2 AISSPTVSR 9 0 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 AIS(0.886)S(0.113)PT(0.001)VSR;AIS(0.479)S(0.479)PT(0.041)VSR 122.94 0.0057853 56170000 3639.3 3479.9 3381.6 2768.4 3597.5 3052.6 3905.4 3561 3484.7 3163.5 TRUE FALSE 3329.758424 3253.357877 3152.066414 2981.622648 3454.203957 3225.435574 3644.877892 3529.866552 3846.947035 3555.418263 0.93653072 0.915042236 0.886552912 0.838613751 0.971532377 0.907188785 1.025161492 0.992813304 1.081995633 1 11.79580357 -7.23105703 1.426503118 1.034363354 0.900912949 0.6605354 0.040041185 0.251963346 1.004035839 0.02319301 0.014011446 5.87E-08 7.23105703 -0.133450405 AIS(ph)TGSLASSTLNK ddPTM_A459_MK2206_30min_R1 1 AISTGSLASSTLNK 14 0 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 AIS(0.69)T(0.124)GS(0.186)LASSTLNK 137.93 0.00058291 16872000 2949.2 2181.5 2154.6 1893.2 2865.1 2693.2 2901.2 2496.4 2107.3 2178.3 TRUE FALSE 2698.355053 2039.483953 2008.351755 2039.014592 2750.977 2845.686657 2707.666242 2474.574238 2326.361376 2448.164249 1.102195269 0.833066635 0.820350087 0.832874915 1.12368972 1.16237571 1.105998604 1.01078767 0.950247262 1 11.25748464 -6.260941148 24.99988013 1.066922946 0.887062671 0.403330981 0.095753939 44.47024222 2231382.554 0.030472873 0.036961168 5.48E-07 6.260941148 -0.179860275 AIS(ph)TGSLASSTLNK ddPTM_A459_MK2206_30min_R2 2 AISTGSLASSTLNK 14 0 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 AIS(0.987)T(0.01)GS(0.003)LASSTLNK;AIS(0.97)T(0.029)GS(0.001)LASSTLNK 200.19 7.32E-05 25150000 58294 65244 54745 70870 67639 70977 72728 57329 66544 55375 TRUE FALSE 62757.03346 62004.07783 56570.17098 65079.6943 64983.153 73678.07947 63178.72624 64822.09714 72331.87684 53568.11828 1.171537016 1.157480976 1.05604178 1.214896031 1.213093816 1.375409139 1.179409101 1.210087254 1.350278471 1 15.709087 -5.929495354 8.565486921 1.235384838 1.131357139 0.14210343 0.100228724 0.465790604 51.0404383 0.026948031 0.040055547 1.18E-06 5.929495354 -0.1040277 AISPT(ph)SSSR ddPTM_A459_MK2206_30min_R2 1 AISPTSSSR 9 0 A0A0U1RRL2;B1AM27;O14795;O14795-2 A0A0U1RRL2 UNC13B Protein unc-13 homolog B 1 AIS(0.142)PT(0.854)S(0.004)SSR 120.63 0.015244 18972000 37872 53809 54699 57433 61534 66390 66701 35861 44708 48706 TRUE FALSE 40771.50944 51136.92331 56522.63736 52740.54018 59117.86598 68916.51797 57943.07858 40548.15583 48596.62103 47116.72721 0.865329828 1.08532418 1.199629955 1.11935916 1.254710789 1.462676252 1.229777236 0.860589396 1.031409096 1 15.52395171 -7.753109326 24.98310875 0.959499425 1.183543192 0.297143393 0.147308293 227.3183523 681768.3523 0.076917794 0.043461285 1.77E-08 7.753109326 0.224043767 AISPTS(ph)SSR ddPTM_A459_MK2206_30min_R2 1 AISPTSSSR 9 0 A0A0U1RRL2;B1AM27;O14795;O14795-2 A0A0U1RRL2 UNC13B Protein unc-13 homolog B 1 AIS(0.031)PT(0.257)S(0.677)S(0.035)SR 89.029 0.030411 21756000 30197 29025 28227 39810 31090 34253 33514 25844 25539 33087 TRUE FALSE 32508.90554 27583.66071 29168.07409 36557.39565 29869.25039 35556.52192 29113.57154 29221.89954 27760.33606 32007.3739 1.015669253 0.861790811 0.911292322 1.142155422 0.933199033 1.110885324 0.90958951 0.91297398 0.867310644 1 14.96611669 -10.52852791 4.554590442 1.000001065 0.964014274 0.01429635 0.092234044 131908625.8 65.05716238 1472.950105 0.022639728 2.96E-11 10.52852791 -0.035986791 AISS(ph)ANLLVR ddPTM_A459_MK2206_30min_R2 2 AISSANLLVR 10 0 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 AIS(0.254)S(0.746)ANLLVR;AIS(0.272)S(0.728)ANLLVR 145.14 0.00091257 30285100 41900 55452 51649 50218 36985 44366 49779 42412 31427.2 32340 TRUE FALSE 45107.89622 52698.33431 53370.95188 46115.02876 35532.78307 46054.37922 43242.9575 47955.39402 34160.68105 31284.74845 1.441849414 1.684473647 1.705973502 1.474041859 1.13578612 1.472103229 1.38223766 1.532868135 1.091927624 1 14.93317188 -10.26785214 0.071478107 2.85E-08 2.229444103 0.524324439 0.158635918 77.54182375 1.196925734 26.0697102 12.31428635 5.40E-11 10.26785214 2.229444074 AISS(ph)DMFFGR ddPTM_A459_MK2206_30min_R1 1 AISSDMFFGR 10 0 Q8N6H7;E9PMU9;H0YDN9;A0A0D9SF70;G5E9L0;Q8N6H7-3;Q8N6H7-2 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 1 AIS(0.27)S(0.73)DMFFGR 136.5 0.0018488 3769000 2926.4 3120.2 2802.9 2979.4 1724.1 1843.4 2066.9 2117.3 2844.5 2234.2 TRUE FALSE 2677.494313 2917.074413 2612.646957 3208.873904 1655.425446 1947.771715 1929.020872 2098.788669 3140.195954 2510.989563 1.066310411 1.161723034 1.040484993 1.277931996 0.659272133 0.775698849 0.768231338 0.835841256 1.250581046 1 11.29404032 -6.253981311 24.9421711 0.862432264 1.131539947 0.369077693 0.162126366 607.9131651 2033055.62 0.048994143 0.062015487 5.57E-07 6.253981311 0.269107683 AISS(ph)PTVSR ddPTM_A459_MK2206_30min_R2 1 AISSPTVSR 9 0 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 AIS(0.027)S(0.946)PT(0.027)VSR 109.83 0.0076761 0 192090 258100 181520 254260 199080 242320 245300 154270 217340 232890 TRUE FALSE 206796.5581 245283.1293 187571.7862 233486.1447 191263.1189 251541.6574 213091.8153 174433.6187 236243.8403 225290.8184 0.917909392 1.088740017 0.832576257 1.036376655 0.848961002 1.116519791 0.945852196 0.774259777 1.048617259 1 17.78142899 -7.521727497 24.9999724 0.918874329 0.974678137 0.00743591 0.109765331 149.1385523 3238875.216 0.047801649 0.028058046 3.01E-08 7.521727497 0.055803808 AIST(ph)PETPLTK ddPTM_A459_MK2206_30min_R1 2 AISTPETPLTK 11 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 1 AIS(0.135)T(0.863)PET(0.002)PLTK;AIS(0.077)T(0.921)PET(0.002)PLTK 174.23 0.00033748 41101000 18821 16909.6 17009.9 13516.7 17105.5 14633.3 18222.2 15161.9 15632.8 13659.8 TRUE FALSE 17220.17512 15808.78197 15855.31538 14557.75858 16424.15171 15461.8248 17006.63029 15029.34111 17257.8855 15352.07915 1.121683581 1.029748597 1.032779679 0.94825974 1.069832402 1.007148585 1.10777375 0.978977568 1.124139951 1 13.90614643 AIST(ph)PETPLTK ddPTM_A459_MK2206_30min_R2 1 AISTPETPLTK 11 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 1 AIS(0.001)T(0.998)PETPLTK 164.81 0.0015344 22077000 142720 138130 124650 145010 146810 127770 152820 120180 121940 142530 TRUE FALSE 153646.7529 131270.6651 128805.7688 133162.2191 141045.5017 132632.3769 132754.5504 135887.9386 132546.1208 137879.2578 1.114357267 0.952069711 0.934192502 0.965788628 1.022963889 0.961945829 0.96283192 0.985557515 0.961320237 1 17.07304591 -4.756813005 24.99891818 0.971040339 1.114357483 0.761092681 0.023948417 69.99758971 378190.3211 0.00619177 0.048623146 1.75E-05 4.756813005 0.143317144 AISTGS(ph)LASSTLNK ddPTM_A459_MK2206_30min_R1 1 AISTGSLASSTLNK 14 0 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 AIS(0.024)T(0.322)GS(0.654)LASSTLNK 250.81 1.63E-27 14206000 2940.5 2397.1 2391.9 2010.3 3238 2926.3 3244.1 2704.3 2546.9 2557.2 TRUE FALSE 2690.395034 2241.048354 2229.544492 2165.133654 3109.023603 3091.984577 3027.692008 2680.65659 2811.659369 2874.005242 0.936113475 0.779764881 0.775762152 0.753350628 1.081773811 1.075845142 1.053474769 0.932725018 0.978306973 1 11.48884698 -6.260268883 24.99997072 1.021421106 0.806464312 0.728354313 0.062531604 58.26333047 1244412.541 0.020246468 0.024666006 5.49E-07 6.260268883 -0.214956793 AIT(ph)PPLPESTVPFSNGVLK ddPTM_A459_MK2206_30min_R2 1 AITPPLPESTVPFSNGVLK 19 0 Q92667-2;Q92667;I3NI36 Q92667-2 AKAP1 "A-kinase anchor protein 1, mitochondrial" 1 AIT(1)PPLPESTVPFSNGVLK 135.09 0.00045478 9127500 35188 31743 32357 35346 24922 36890 50343 26905 34998 34324 TRUE FALSE 37882.02033 30166.68878 33435.76623 32458.11873 23943.43706 38293.8748 43732.90363 30421.57588 38042.06278 33204.01069 1.140886885 0.908525451 1.006979745 0.977536089 0.721100751 1.153290642 1.317097023 0.916201846 1.145706858 1 15.01906989 AIT(ph)PPQQPYK ddPTM_A459_MK2206_30min_R1 1 AITPPQQPYK 10 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 AIT(1)PPQQPYK 106.16 0.028232 39613000 4489.4 4801 4633 4152.1 4486.4 4424.4 4538.1 4470.5 4016.7 3072.4 TRUE FALSE 4107.552955 4488.454027 4318.524868 4471.895461 4307.697188 4674.905705 4235.371629 4431.41489 4434.250339 3453.032107 1.189549598 1.299858758 1.25064718 1.295063388 1.247511478 1.353855267 1.226565956 1.283340193 1.28416134 1 11.75364803 -10.70734604 5.836910308 0.999995275 1.272014756 0.782799921 0.042665304 2.43E-06 3.40E-07 0.038306469 0.009290522 1.96E-11 10.70734604 0.272019481 AIT(ph)PPQQPYK ddPTM_A459_MK2206_30min_R2 1 AITPPQQPYK 10 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 AIT(1)PPQQPYK 103.34 0.033498 78988000 43504 49072 47830 49546 45383 42589 58655 42171 42954 44288 TRUE FALSE 46834.69969 46635.15584 49424.62833 45497.93331 43601.03539 44209.75424 50953.52804 47682.89449 46690.06128 42842.88619 1.09317331 1.088515737 1.153625088 1.061971715 1.017696035 1.031904201 1.189311285 1.112971108 1.08979729 1 15.38676805 AIT(ph)PPQQPYKK ddPTM_A459_MK2206_30min_R2 1 AITPPQQPYKK 11 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 AIT(1)PPQQPYKK 94.363 0.027826 15766000 64929 85366 67939 85042 83437 73780 74315 56975 64704 65331 TRUE FALSE 69900.01416 81126.84857 70204.05235 78093.79656 80160.84414 76587.7496 64557.35123 64421.82812 70331.83696 63199.25482 1.106025923 1.283667803 1.110836711 1.235675908 1.268382742 1.21184577 1.021489121 1.019344742 1.112858643 1 15.94761993 -7.258631803 24.96487547 1.040035184 1.206721266 0.632437317 0.061318076 153.7262954 1366938.402 0.023399545 0.017300701 5.51E-08 7.258631803 0.166686082 AITS(ph)PLAAGSKPSK ddPTM_A459_MK2206_30min_R2 2 AITSPLAAGSKPSK 14 1 Q9UGU5;B0QXZ8;B0QXZ9 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 AIT(0.052)S(0.946)PLAAGS(0.001)KPSK;AIT(0.139)S(0.861)PLAAGSKPSK 78.814 0.020526 16904500 155327 157831 135570 158059 144076 130101 206340 134485 114128 168257 TRUE FALSE 167218.9545 149993.342 140089.8361 145145.0741 138418.8523 135052.0847 179247.3101 152062.6513 124054.6471 162766.7879 1.027353041 0.921523021 0.860678262 0.891736429 0.85041214 0.829727529 1.101252365 0.934236359 0.762161917 1 17.31244683 -9.753764288 15.52105857 0.999991703 0.909612038 0.080310023 0.092562919 0 0 0.091123016 0.022100578 1.76E-10 9.753764288 -0.090379665 AITSLLGGGS(ph)PK ddPTM_A459_MK2206_30min_R1 2 AITSLLGGGSPK 12 0 A0A590UJS4;Q6KC79-2;Q6KC79 A0A590UJS4 NIPBL Nipped-B-like protein 1 AITSLLGGGS(1)PK;AITSLLGGGS(1)PK 145.1 0.00069226 302680000 12909.5 16859.3 17448.8 14950.8 10970.3 9283 11329.1 11989.5 14943.8 14211.4 TRUE FALSE 11811.47923 15761.75651 16264.42407 16102.31321 10533.32972 9808.595438 10573.35641 11884.67707 16497.26149 15972.01552 0.739510879 0.986835787 1.018307555 1.008157874 0.659486569 0.614111314 0.66199262 0.744093759 1.03288539 1 13.96325876 -6.254402842 24.85277022 0.757895332 0.947398547 0.183522135 0.150821923 739.3460767 2611339.733 0.046031018 0.058128463 5.57E-07 6.254402842 0.189503215 AITSLLGGGS(ph)PK ddPTM_A459_MK2206_30min_R2 2 AITSLLGGGSPK 12 0 A0A590UJS4;Q6KC79-2;Q6KC79 A0A590UJS4 NIPBL Nipped-B-like protein 1 AITSLLGGGS(1)PK;AITSLLGGGS(1)PK 162.94 0.0004962 121360000 196537 192810 198938 179762 164900 127040 218641 171026 141823 210673 TRUE FALSE 211584.0238 183235.3358 205570.4936 165074.8696 158425.1974 131874.5962 189933.1741 193379.6854 154158.5082 203798.7573 1.038200756 0.899099377 1.008693558 0.809989579 0.777360959 0.647082436 0.931964339 0.948875685 0.756425163 1 17.63678573 -5.765070147 24.99589893 0.830015734 0.973708057 0.284454108 0.103159759 120.4714237 829390.3569 0.029417077 0.045622701 1.72E-06 5.765070147 0.143692323 AITVFS(ph)PDGHLFQVEYAQEAVK ddPTM_A459_MK2206_30min_R2 1 AITVFSPDGHLFQVEYAQEAVK 22 0 Q8TAA3-2;O14818;Q8TAA3-5;Q8TAA3;F5GY34;O14818-4 Q8TAA3-2 PSMA8;PSMA7 Proteasome subunit alpha type-7-like;Proteasome subunit alpha type-7 1 AIT(0.03)VFS(0.97)PDGHLFQVEYAQEAVK 86.18 0.0021289 0 7312.4 7502.8 6633.7 8300.5 8613.1 5627.4 10338 6780.5 5888.2 8639.2 TRUE FALSE 7872.242966 7130.221862 6854.864247 7622.322598 8274.906417 5841.55465 8980.608182 7666.734631 6400.344993 8357.303612 0.941959672 0.85317253 0.820224389 0.912055246 0.990140696 0.698976 1.074582018 0.917369404 0.765838516 1 13.02882183 -11.44355715 2.494304852 1.071059078 0.887925756 0.09902894 0.10298342 53058022.65 26918572.29 22003748.99 0.025183232 3.60E-12 11.44355715 -0.183133322 AIYCYDPVEDYWMHVQNTFSRQENCGMSVCNGKIYILGGR ddPTM_A459_MK2206_30min_R1 1 AIYCYDPVEDYWMHVQNTFSRQENCGMSVCNGKIYILGGR 40 2 Q6TFL4 Q6TFL4 KLHL24 Kelch-like protein 24 0 35.472 0.02579 12209000 1551 1415.9 1876.3 1655.6 1627.8 1421.4 1858.8 1489.9 1620 1753.6 FALSE TRUE 1419.079305 1323.724653 1748.941984 1783.114599 1562.961279 1501.87844 1734.802844 1476.873961 1788.404797 1970.849207 0.72003444 0.671651919 0.887405276 0.904744306 0.793039505 0.762046347 0.88023114 0.749359188 0.907428529 1 10.94460168 -14.52287875 0.080164591 1.604800521 0.624888578 0.453533875 0.072390471 268.4917095 1.517828144 28.96968763 2.675861528 3.00E-15 14.52287875 -0.979911943 AIYHDLEQSIR ddPTM_A459_MK2206_30min_R1 1 AIYHDLEQSIR 11 0 A0A0U1RR22;Q9UNF0;Q9UNF0-2 A0A0U1RR22 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 0 127.51 0.0041488 1755500 2211.2 1657 1777.9 1445.6 2452.4 1906.7 2023.9 2147.8 1554 1475 FALSE TRUE 2023.125829 1549.128999 1657.221102 1556.940362 2354.715715 2014.655706 1888.889324 2129.022011 1715.543861 1657.734136 1.220416341 0.934485793 0.999690521 0.939197866 1.420442316 1.215306884 1.139440447 1.284296417 1.034872736 1 10.69499693 -6.221271202 24.99656072 1.19610623 1.015396269 0.246838722 0.134450899 656.7189676 408674.3723 0.038343327 0.049500403 6.01E-07 6.221271202 -0.180709961 AIYHDLEQSIR ddPTM_A459_MK2206_30min_R2 1 AIYHDLEQSIR 11 0 A0A0U1RR22;Q9UNF0;Q9UNF0-2 A0A0U1RR22 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 0 141.89 0.0013587 2693000 12541 16864 15910 13805 17839 16698 16738 13554 15206 15234 FALSE TRUE 13501.1486 16026.55828 16440.43146 12677.08734 17138.55123 17333.45409 14540.28049 15325.55434 16528.59039 14736.91583 0.916144786 1.087511015 1.115595125 0.860226623 1.162967301 1.176192786 0.986656955 1.039943128 1.121577309 1 13.84714701 -4.755361071 24.89673415 1.062299772 0.916144534 0.189307072 0.090017708 334.5278538 1370083.807 0.022391938 0.19911002 1.76E-05 4.755361071 -0.146155239 AKADS(ph)PVNGLPK ddPTM_A459_MK2206_30min_R1 1 AKADSPVNGLPK 12 1 Q96S94;Q96S94-3;A0A0A0MSF3 Q96S94 CCNL2 Cyclin-L2 1 AKADS(1)PVNGLPK 118.47 0.021427 18527000 4384.1 5085.1 5471.6 4067.4 3861.9 3433.6 4139.9 4523.1 3923.5 3650.5 TRUE FALSE 4011.209273 4754.059066 5100.203037 4380.671853 3708.072345 3628.007465 3863.734825 4483.555014 4331.361865 4102.7515 0.977687601 1.158748968 1.243117707 1.067739992 0.90380135 0.884286427 0.941742347 1.092816617 1.055721231 1 12.00237606 -6.005223206 24.792033 0.978431385 1.134022469 0.380024248 0.085003335 223.0691812 1058814.332 0.026254394 0.037708266 9.88E-07 6.005223206 0.155591085 AKADS(ph)PVNGLPK ddPTM_A459_MK2206_30min_R2 2 AKADSPVNGLPK 12 1 Q96S94;Q96S94-3;A0A0A0MSF3 Q96S94 CCNL2 Cyclin-L2 1 AKADS(1)PVNGLPK;AKADS(1)PVNGLPK 115.1 0.0029361 50152200 336684 370760 365913 332341 404390 248203 415410 289645 284007 407250 TRUE FALSE 362460.7859 352348.5975 378112.3568 305187.6772 388511.6167 257648.5391 360866.168 327502.596 308709.4155 393961.4659 0.920041216 0.894373252 0.9597699 0.774663777 0.986166543 0.653994264 0.915993566 0.831306167 0.783603074 1 18.587695 -5.747570103 24.99162241 0.842693438 0.921692631 0.106869311 0.09836591 496.9184259 895410.066 0.024986906 0.042994358 1.79E-06 5.747570103 0.078999194 AKATENGLVNGENS(ph)IPNGTR ddPTM_A459_MK2206_30min_R2 1 AKATENGLVNGENSIPNGTR 20 1 Q86TU7 Q86TU7 SETD3 Histone-lysine N-methyltransferase setd3 1 AKAT(0.004)ENGLVNGENS(0.954)IPNGT(0.042)R 78.078 0.02389 6033500 20807 34943 25226 30933 30870 30304 24446 24306 30427 25498 TRUE FALSE 22399.99992 33207.78143 26067.02225 28405.67495 29657.88869 31457.23996 21236.21084 27482.87765 33073.48546 24666.00235 0.908132562 1.346297668 1.056799634 1.151612432 1.202379221 1.275327859 0.860950653 1.114200723 1.34085309 1 14.59023629 AKDQNES(ph)LDEEMFYK ddPTM_A459_MK2206_30min_R1 1 AKDQNESLDEEMFYK 15 1 A0A0U1RRM8;H0YJ34;Q96AC1;Q96AC1-3 A0A0U1RRM8 FERMT2 Fermitin family homolog 2 1 AKDQNES(1)LDEEMFYK 92.993 0.0071121 8555800 3077.8 3568.9 4064.5 3803.2 3971.9 3368 3535.6 4376.4 3289 3034.1 TRUE FALSE 2816.016948 3336.563961 3788.613064 4096.123123 3813.690812 3558.693249 3299.746575 4338.137596 3630.90332 3409.987214 0.825814518 0.978468174 1.11103439 1.201213631 1.118388596 1.043608971 0.967671246 1.272185883 1.064785025 1 11.73555061 -4.932188862 2.440288076 1.104725695 0.805771639 0.495209729 0.085511342 0.322790486 3.067027895 0.022903465 0.179228011 1.17E-05 4.932188862 -0.298954056 AKEAAGPAPS(ph)PMR ddPTM_A459_MK2206_30min_R1 1 AKEAAGPAPSPMR 13 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 AKEAAGPAPS(1)PMR 102.65 0.04334 3540200 808.01 625.96 893.57 747.11 940.62 884.7 777.24 775.75 775.38 358.2 TRUE FALSE 739.2845065 585.2098902 832.916958 804.6525417 903.1531136 934.7909495 725.3917378 768.9676995 855.9835257 402.5765203 1.836382574 1.453661256 2.068965566 1.998756761 2.243432163 2.322020541 1.801872939 1.91011562 2.126262916 1 8.653119221 -11.00780803 6.146537272 0.999335909 1.973036349 0.607993446 0.234505196 0.00231389 0.0001939 0.246188761 0.059674129 9.82E-12 11.00780803 0.97370044 AKGSET(ph)PGATPGSK ddPTM_A459_MK2206_30min_R1 2 AKGSETPGATPGSK 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 AKGS(0.215)ET(0.784)PGAT(0.001)PGSK;AKGS(0.001)ET(0.999)PGATPGSK 201.04 0.00065521 15777400 8113.8 8116.6 8228.5 7963.1 6503.69 6222.2 6580.43 7571.23 1670.69 4209.04 TRUE FALSE 7423.678703 7588.207865 7669.972346 8576.419342 6244.634256 6574.495587 6141.461521 7505.035534 1844.364204 4730.487652 1.569326304 1.604106896 1.621391474 1.813009561 1.320082561 1.389813497 1.298272392 1.586524707 0.389888811 1 12.2077732 -8.250982496 24.86028112 0.694944402 1.521808646 0.732846751 0.200533384 286.0971153 680173.9475 0.139460833 0.051455645 5.61E-09 8.250982496 0.826864244 AKGSET(ph)PGATPGSK ddPTM_A459_MK2206_30min_R2 1 AKGSETPGATPGSK 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 AKGS(0.098)ET(0.902)PGATPGSK 161.99 0.0028914 3825600 11413 15815 14406 15208 14637 11883 15791 10322 11712 9381.9 TRUE FALSE 12286.78806 15029.6501 14886.28885 13965.45775 14062.27783 12335.21589 13717.62273 11671.12084 12730.68859 9075.769371 1.353801265 1.656019394 1.640223351 1.538762961 1.549430936 1.359137213 1.511455632 1.285964899 1.402711778 1 13.14780423 -8.953018879 0.36987542 0.940733171 1.57958154 0.706035838 0.100739112 1.252756943 0.353801372 0.245769915 0.086658944 1.11E-09 8.953018879 0.63884837 AKGSETPGATPGS(ph)K ddPTM_A459_MK2206_30min_R1 1 AKGSETPGATPGSK 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 AKGSETPGAT(0.008)PGS(0.992)K 92.856 0.0083456 8543800 13612 14432 14385 14121 11853 9774.7 11799 15064 0 6744 TRUE FALSE 12454.22792 13492.47418 13408.58628 15208.60187 11380.86991 10328.13507 11011.91024 14932.29704 0 7579.497635 1.643146884 1.780127764 1.769060026 2.00654484 1.501533539 1.36264111 1.452854895 1.970090599 0 1 12.88788652 -8.255250177 24.99989045 0.499999969 1.677692053 0.715448416 0.299084738 228.3110375 922220.4687 0.208093367 0.074270585 5.56E-09 8.255250177 1.177692084 AKPAMPQDSVPS(ph)PR ddPTM_A459_MK2206_30min_R1 4 AKPAMPQDSVPSPR 14 1 P53396 P53396 ACLY ATP-citrate synthase 1 AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR 195.23 0.00031245 481345000 22586.2 23824.2 21708.3 19109.9 24372.8 20804.3 25251.2 21910.5 19756.8 18546.7 TRUE FALSE 20665.12509 22273.24025 20234.80108 20581.74781 23401.97977 21982.22149 23566.73852 21718.93881 21810.59006 20844.40522 0.991399125 1.068547652 0.970754544 0.987399141 1.12269837 1.054586171 1.13060259 1.041955315 1.046352239 1 14.34737259 -6.241898064 24.95060795 1.07078641 1.006685967 0.323108915 0.043241021 936.7638996 1196072.395 0.012519906 0.016137463 5.73E-07 6.241898064 -0.064100443 AKPAMPQDSVPS(ph)PR ddPTM_A459_MK2206_30min_R2 8 AKPAMPQDSVPSPR 14 1 P53396 P53396 ACLY ATP-citrate synthase 1 AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR 145.17 0.00028716 1234896000 499991 576399 494124 586801 533731 517471 592786 465447 436524 509286 TRUE FALSE 538270.6954 547775.8638 510597.8475 538857.4812 512774.0392 537163.7215 514952.4861 526282.521 474492.0685 492668.0395 1.092562643 1.111855895 1.036393284 1.09375368 1.04081044 1.090315747 1.045232174 1.068229475 0.963107063 1 18.91025636 -8.252456214 24.12681662 0.981553531 1.071860713 0.670988324 0.025441978 198.2632121 532497.2817 0.017203587 0.00627422 5.59E-09 8.252456214 0.090307182 AKPPADPAAAAS(ph)PCR ddPTM_A459_MK2206_30min_R1 5 AKPPADPAAAASPCR 15 1 Q9GZT9;Q9GZT9-2 Q9GZT9 EGLN1 Egl nine homolog 1 1 AKPPADPAAAAS(1)PCR;AKPPADPAAAAS(1)PCR;AKPPADPAAAAS(1)PCR;AKPPADPAAAAS(1)PCR;AKPPADPAAAAS(1)PCR 151.28 0.00013722 387111000 36299.3 34725.3 33981.7 31235.8 38715.9 37362.3 44279.7 39448.2 32475.5 32915.1 TRUE FALSE 33211.85392 32464.67666 31675.11688 33641.58673 37173.76372 39477.72114 41325.88201 39103.30855 35851.44444 36992.87108 0.897790654 0.877592782 0.856249217 0.909407292 1.004889932 1.067171052 1.117130971 1.057049842 0.969144686 1 15.17495965 -6.297437236 2.557384987 1.049707855 0.877577927 0.787600115 0.038787251 0.12830984 1.6569083 0.013496038 0.016650333 5.04E-07 6.297437236 -0.172129928 AKPPADPAAAAS(ph)PCR ddPTM_A459_MK2206_30min_R2 4 AKPPADPAAAASPCR 15 1 Q9GZT9;Q9GZT9-2 Q9GZT9 EGLN1 Egl nine homolog 1 1 AKPPADPAAAAS(1)PCR;AKPPADPAAAAS(1)PCR;AKPPADPAAAAS(1)PCR;AKPPADPAAAAS(1)PCR 192.23 0.00014082 119437300 132809 144424 145077 167324 147170 167854 183340 143378 150177 158210 TRUE FALSE 142976.9592 137252.1142 149913.7948 153653.094 141391.3663 174241.8016 159267.2378 162117.9969 163239.124 153047.6207 0.934199163 0.896793518 0.979523851 1.003956111 0.923839036 1.138480957 1.040638444 1.059265059 1.066590407 1 17.22362109 -6.745359146 24.99996638 1.063426767 0.949733789 0.643710843 0.042124564 155.6024318 241914.7966 0.014000772 0.013959016 1.80E-07 6.745359146 -0.113692977 AKPPS(ph)SSSTCTDSATR ddPTM_A459_MK2206_30min_R2 1 AKPPSSSSTCTDSATR 16 1 D6RJC6;A0A087WYP9;A6NFV8;Q96EV8-3;Q96EV8;D6RAR7 D6RJC6 DTNBP1 Dysbindin 1 AKPPS(0.239)S(0.193)S(0.193)S(0.076)T(0.112)CT(0.167)DS(0.01)AT(0.01)R 59.857 0.041267 1900600 5162.8 6668 5560.2 4642.3 4391.7 3588.6 4881.7 3042.5 4124.9 4039.7 TRUE FALSE 5558.067938 6336.876816 5745.574293 4263.00924 4219.259791 3725.166688 4240.726926 3440.165196 4483.676346 3907.88492 1.422270116 1.621561777 1.470251661 1.090873792 1.079678618 0.953243702 1.085171906 0.880313844 1.147340937 1 11.93217227 -5.772664405 3.352773625 1.021953236 1.530668807 0.873108325 0.082729547 0.068948864 1.615267728 0.022355235 0.038039417 1.69E-06 5.772664405 0.508715572 AKS(ph)LSAMDVEK ddPTM_A459_MK2206_30min_R2 1 AKSLSAMDVEK 11 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 AKS(0.992)LS(0.008)AMDVEK 72.615 0.033033 19358000 67162 100270 113360 103230 118480 93631 107530 100420 99573 94058 TRUE FALSE 72303.97436 95290.73761 117139.3658 94795.77878 113827.8799 97194.19332 93411.18183 113545.2388 108233.6796 90988.89516 0.79464614 1.047278763 1.287402882 1.041838992 1.251008485 1.068198412 1.026621784 1.24790216 1.189526253 1 16.47340286 -4.824024734 3.547613889 1.143231385 0.769446593 0.525671112 0.098224578 0.19070759 4.022044578 0.023841319 0.177727577 1.50E-05 4.824024734 -0.373784792 AKS(ph)PAPGLASGDRPPSVSSVHSEGDCNR ddPTM_A459_MK2206_30min_R2 1 AKSPAPGLASGDRPPSVSSVHSEGDCNR 28 2 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 AKS(0.974)PAPGLAS(0.025)GDRPPSVSSVHSEGDCNR 52.926 0.0055495 6785400 2114.9 4639.5 4220.6 4954.7 5477.8 7152.5 4662.3 4007 4592.8 3428.3 TRUE FALSE 2276.81837 4409.109176 4361.312697 4549.885161 5262.714048 7424.693399 4050.13441 4530.728658 4992.273442 3316.434852 0.686525885 1.329472573 1.315060567 1.371920561 1.586858866 2.238757501 1.22123141 1.366144327 1.505313285 1 11.69541747 -4.538121532 1.322299785 1.500483804 2.91E-14 0.34923806 0.307213899 2.638982825 2.710926499 0.091647135 6.222618127 2.90E-05 4.538121532 -1.500483804 AKS(ph)PNGSSSVNWPPEFRPGEPWK ddPTM_A459_MK2206_30min_R1 1 AKSPNGSSSVNWPPEFRPGEPWK 23 2 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7;H7C269 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 AKS(0.672)PNGS(0.109)S(0.109)S(0.109)VNWPPEFRPGEPWK 54.834 0.022954 4661900 742.75 685.01 687.19 900.02 1004.2 667.05 816.49 1039.3 642.76 528.93 TRUE FALSE 679.5752122 640.4157245 640.5454574 969.3396963 964.2005876 704.8177945 762.0234419 1030.21351 709.5772021 594.4578416 1.143184873 1.077310584 1.077528821 1.63062816 1.621983125 1.185648073 1.281879704 1.733030398 1.193654373 1 9.215430689 -5.733871151 24.95280561 1.40679222 1.09713805 0.246534044 0.219352361 270.1225469 244493.6892 0.058415773 0.101149869 1.85E-06 5.733871151 -0.30965417 AKS(ph)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK ddPTM_A459_MK2206_30min_R1 8 AKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 32 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 AKS(0.862)PQPPVEEEDEHFDDT(0.138)VVCLDTYNCDLHFK;AKS(0.901)PQPPVEEEDEHFDDT(0.099)VVCLDTYNCDLHFK;AKS(0.719)PQPPVEEEDEHFDDT(0.28)VVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(0.999)PQPPVEEEDEHFDDT(0.001)VVCLDTYNCDLHFK;AKS(0.974)PQPPVEEEDEHFDDT(0.026)VVCLDTYNCDLHFK;AKS(0.991)PQPPVEEEDEHFDDT(0.009)VVCLDTYNCDLHFK;AKS(0.716)PQPPVEEEDEHFDDT(0.283)VVCLDT(0.001)YNCDLHFK 104.89 5.22E-12 695234000 79473.9 90559.29 92384.16 78681.05 83871 73564.86 96273.87 102702.2 90497.34 91645.34 TRUE FALSE 72714.22747 84663.86376 86113.38062 84741.0781 80530.24047 77730.0388 89851.61579 101804.2855 99904.86234 102999.0566 0.70596984 0.821986789 0.836059897 0.822736449 0.781854156 0.754667483 0.872353774 0.988400174 0.969959004 1 16.6522716 -7.593009853 3.147138185 0.98552704 0.79277538 0.853021213 0.036862598 0.096192205 1.923265934 0.0203039 0.0108933 2.55E-08 7.593009853 -0.192751661 AKS(ph)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK ddPTM_A459_MK2206_30min_R2 4 AKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 32 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 AKS(0.966)PQPPVEEEDEHFDDT(0.033)VVCLDT(0.001)Y(0.001)NCDLHFK;AKS(0.722)PQPPVEEEDEHFDDT(0.278)VVCLDTYNCDLHFK;AKS(0.956)PQPPVEEEDEHFDDT(0.044)VVCLDTYNCDLHFK;AKS(0.618)PQPPVEEEDEHFDDT(0.38)VVCLDT(0.002)Y(0.001)NCDLHFK 72.103 3.24E-05 53114600 116825 137060 143405 152967 135577 123366 157495 127005 129404 139656 TRUE FALSE 125769.2118 130253.7997 148186.0511 140469.1068 130253.5658 128060.7796 136815.7173 143604.9896 140659.326 135099.0362 0.930940852 0.96413567 1.096869788 1.039749141 0.964133938 0.947902985 1.012706835 1.062960874 1.041157139 1 17.04365786 -7.529168782 23.07249141 1.038802216 0.99402898 0.144148842 0.047598746 135.8654837 498342.24 0.024397088 0.014148825 2.96E-08 7.529168782 -0.044773236 AKS(ph)PTPDGSER ddPTM_A459_MK2206_30min_R1 3 AKSPTPDGSER 11 1 J3QR07;Q96MU7;Q96MU7-2 J3QR07 YTHDC1 YTH domain-containing protein 1 1 AKS(0.97)PT(0.03)PDGSER;AKS(0.976)PT(0.024)PDGSER;AKS(0.962)PT(0.038)PDGSER 164.13 0.0025946 20137500 9766.1 8519 7437.3 7131.5 4670.71 4655.9 7850.3 8899.2 1579.09 5324.2 TRUE FALSE 8935.441911 7964.411552 6932.476798 7680.769366 4484.66573 4919.513034 7326.620811 8821.395233 1743.242056 5983.802092 1.493271631 1.330995148 1.158540455 1.283593483 0.74946759 0.822138326 1.224408946 1.474212398 0.291326824 1 12.54684674 -5.431737683 1.056636521 0.970463494 1.503944847 0.273201066 0.302825223 1.173118322 2.060486841 0.107936226 0.554467737 3.70E-06 5.431737683 0.533481353 AKS(ph)PTPDGSER ddPTM_A459_MK2206_30min_R2 1 AKSPTPDGSER 11 1 J3QR07;Q96MU7;Q96MU7-2 J3QR07 YTHDC1 YTH domain-containing protein 1 1 AKS(0.972)PT(0.028)PDGSER 164.22 0.0030781 10000000 38737 40657 30761 34016 35961 26678 37591 38425 32233 37532 TRUE FALSE 41702.7345 38638.0325 31786.55639 31236.78399 34548.99045 27693.24998 32655.25655 43447.27943 35036.56808 36307.33391 1.148603602 1.064193603 0.875485831 0.860343645 0.951570571 0.762745346 0.89941213 1.196652983 0.964999748 1 15.14797337 -10.23120557 10.43922194 0.999979529 0.964189014 0.003748045 0.127136442 0 0 0.132114653 0.03204251 5.87E-11 10.23120557 -0.035790515 AKS(ph)PTPESSTIASYVTLR ddPTM_A459_MK2206_30min_R1 2 AKSPTPESSTIASYVTLR 18 1 A0JP02;B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;H0YGJ6 A0JP02 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 AKS(0.828)PT(0.17)PES(0.001)S(0.001)TIASYVTLR;AKS(0.867)PT(0.132)PES(0.001)STIASYVTLR 83.948 0.0045842 199115000 2828.07 3273.06 3425.3 3380.76 2847.44 2706.98 3119.3 2909.22 2679.34 3014.38 TRUE FALSE 2587.527796 3059.983199 3192.800179 3641.146721 2734.020435 2860.246868 2911.217188 2883.784996 2957.866981 3387.824152 0.763772758 0.903229643 0.942433856 1.074774415 0.80701368 0.84427253 0.859317679 0.85122039 0.873087518 1 11.72614328 AKS(ph)VDEIAK ddPTM_A459_MK2206_30min_R2 1 AKSVDEIAK 9 1 A6ND36;A6ND36-2 A6ND36 FAM83G Protein FAM83G 1 AKS(1)VDEIAK 78.705 0.027937 45422000 402640 546100 454310 361600 404560 314710 467800 379600 425620 325190 TRUE FALSE 433466.428 518981.4681 469456.4687 332056.1233 388674.9416 326686.5096 406377.2981 429215.0234 462639.6583 314579.0769 1.37792517 1.649764737 1.492332145 1.055556926 1.235539711 1.038487724 1.291812863 1.364410588 1.470662521 1 18.26306319 -5.658385444 7.452749419 1.221314355 1.526750497 0.441004004 0.153403755 0.215307808 13.79399033 0.042643896 0.074091645 2.20E-06 5.658385444 0.305436142 AKT(ph)PEPGAQQSGFPTLSR ddPTM_A459_MK2206_30min_R1 1 AKTPEPGAQQSGFPTLSR 18 1 Q9H9D4 Q9H9D4 ZNF408 Zinc finger protein 408 1 AKT(1)PEPGAQQSGFPTLSR 97.352 0.004895 11851000 1708.6 2183.9 1974.2 1727.8 2078.3 2050 2264.1 2078.2 1976.9 1832.2 TRUE FALSE 1563.274598 2041.727713 1840.196804 1860.875455 1995.51691 2166.069228 2113.06602 2060.030517 2182.405829 2059.186768 0.759170864 0.991521383 0.893652209 0.903694353 0.969080095 1.05190518 1.026165306 1.000409748 1.059838701 1 11.00785897 -6.426011093 2.562363228 1.027526405 0.893264858 0.583715528 0.055763643 0.214221728 2.755050189 0.018294362 0.020798402 3.75E-07 6.426011093 -0.134261547 AKT(ph)PEPGAQQSGFPTLSR ddPTM_A459_MK2206_30min_R2 4 AKTPEPGAQQSGFPTLSR 18 1 Q9H9D4 Q9H9D4 ZNF408 Zinc finger protein 408 1 AKT(1)PEPGAQQSGFPTLSR;AKT(1)PEPGAQQSGFPTLSR;AKT(1)PEPGAQQSGFPTLSR;AKT(0.542)PEPGAQQS(0.01)GFPT(0.444)LS(0.004)R 108.25 0.0080227 34519700 51371 53188.1 43557.7 50704.9 46392.7 40362.6 58875.4 48197.6 46183 58805 TRUE FALSE 55304.00326 50546.8563 45009.89198 46562.14747 44571.08949 41898.62703 51144.98926 54497.19181 50199.91386 56886.19767 0.972186673 0.888560993 0.791226938 0.81851397 0.783513248 0.736534146 0.899075547 0.95800377 0.882462107 1 15.79579103 -7.511021816 21.82678657 0.937847813 0.828709677 0.382151578 0.06599433 123.3350745 227047.6695 0.030863852 0.019499918 3.08E-08 7.511021816 -0.109138136 AKT(ph)QTPPVS(ph)PAPQPTEER ddPTM_A459_MK2206_30min_R1 1 AKTQTPPVSPAPQPTEER 18 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 AKT(0.504)QT(0.504)PPVS(0.993)PAPQPTEER 89.631 0.020388 14161000 2698.4 2988 2847.6 2622.8 2491.3 2496.2 2586.7 1990.2 2237.1 2079.4 TRUE FALSE 2468.88691 2793.480657 2654.312846 2824.80851 2392.066246 2637.532687 2414.145963 1972.799891 2469.654551 2337.011771 1.056428958 1.195321603 1.135772134 1.208726694 1.023557637 1.128591957 1.033005479 0.84415488 1.056757429 1 11.19044929 -7.433281223 3.837320152 0.958828644 1.127239922 0.489743101 0.072308852 0.182661663 4.938916892 0.031898062 0.020157024 3.69E-08 7.433281223 0.168411279 AKT(ph)QTPPVSPAPQPT(ph)EERLPSSPVYEDAASFK ddPTM_A459_MK2206_30min_R1 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 AKT(0.487)QT(0.487)PPVS(0.027)PAPQPT(0.325)EERLPS(0.325)S(0.325)PVY(0.022)EDAAS(0.001)FK 56.021 0.0019314 14058000 2227.4 2031.9 2596.4 2466.4 2419.6 1553.1 1944.1 2377.9 1268.2 668.25 TRUE FALSE 2037.947933 1899.622941 2420.163602 2656.362555 2323.222208 1641.03518 1814.412636 2357.110271 1400.033928 751.037855 2.713508939 2.529330483 3.222425589 3.536922324 3.093349014 2.185023257 2.415873746 3.138470658 1.864132306 1 9.552741816 -8.891777145 0.602031717 0.939918007 2.952482025 0.661084376 0.416360076 0.944013894 0.659481869 0.538770671 0.194301802 1.28E-09 8.891777145 2.012564018 AKT(ph)QTPPVSPAPQPTEER ddPTM_A459_MK2206_30min_R1 1 AKTQTPPVSPAPQPTEER 18 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 AKT(0.63)QT(0.37)PPVSPAPQPTEER 82.774 0.012894 7967000 3016.2 2851.7 2914.6 2794.4 2749.5 2427.3 3031.9 3042 2987.8 2720.1 TRUE FALSE 2759.656351 2666.053812 2716.765073 3009.625172 2639.981593 2564.731628 2829.647483 3015.404115 3298.392502 3057.086524 0.902707964 0.872089747 0.888677848 0.984474973 0.863561294 0.838946366 0.925602681 0.986365316 1.078933317 1 11.57794167 -7.828782466 2.712178173 1.03797115 0.89334607 0.680531349 0.040595237 0.161363417 2.352610188 0.02758818 0.011639857 1.48E-08 7.828782466 -0.14462508 AKT(ph)QTPPVSPAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A459_MK2206_30min_R2 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 AKT(0.58)QT(0.388)PPVS(0.031)PAPQPT(0.106)EERLPS(0.394)S(0.394)PVY(0.069)EDAAS(0.036)FK 51.321 0.0079668 10553000 9651.4 23371 17114 19966 27898 16824 25309 16185 21435 16245 TRUE FALSE 10390.3186 22210.43012 17684.57222 18334.71393 26802.58434 17464.24911 21985.8979 18300.43507 23299.37755 15714.92698 0.661175112 1.413333333 1.125335946 1.166706912 1.705549404 1.111315957 1.399045502 1.164525619 1.48262716 1 13.93984795 -4.754740474 24.98567297 1.293056223 0.661174033 0.459831436 0.202808781 196.0643511 731217.0079 0.047296951 0.447722458 1.76E-05 4.754740474 -0.63188219 AKTQT(ph)PPVS(ph)PAPQPTEER ddPTM_A459_MK2206_30min_R1 1 AKTQTPPVSPAPQPTEER 18 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 AKT(0.181)QT(0.819)PPVS(1)PAPQPTEER 93.388 0.015609 12647000 2559.8 2641.2 2867.4 1862.9 2649 2138.4 2638.5 2008.9 2220.2 2023.3 TRUE FALSE 2342.075568 2469.2574 2672.768877 2006.380881 2543.484721 2259.47436 2462.490479 1991.336399 2450.997735 2273.961679 1.029953842 1.085883471 1.175379911 0.882328361 1.118525762 0.99362904 1.082907642 0.875712382 1.077853579 1 11.15099223 -6.206657276 0.678035576 0.997913139 1.08314427 0.071457391 0.088824454 2.18550287 2.109711245 0.054224812 0.108044275 6.21E-07 6.206657276 0.08523113 AKTQT(ph)PPVS(ph)PAPQPTEER ddPTM_A459_MK2206_30min_R2 4 AKTQTPPVSPAPQPTEER 18 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 AKT(0.029)QT(0.971)PPVS(0.999)PAPQPT(0.001)EER;AKT(0.067)QT(0.934)PPVS(0.991)PAPQPT(0.008)EER;AKT(0.332)QT(0.668)PPVS(0.997)PAPQPT(0.003)EER;AKT(0.194)QT(0.806)PPVS(1)PAPQPTEER 137.85 0.0060409 142850700 221871 269104 237287 266771 249703 212013 244764 205285 180699 224671 TRUE FALSE 238857.6143 255740.6867 245198.0301 244974.9559 239898.4056 220081.3033 212626.1928 232116.4543 196415.8724 217340.0037 1.099004372 1.176684836 1.128177169 1.127150786 1.103793142 1.012612955 0.978311352 1.067987717 0.903726277 1 17.72959422 -6.718614562 2.370375671 0.991908358 1.135500121 0.730999797 0.041236961 0.150006988 1.727552286 0.014855777 0.014099269 1.91E-07 6.718614562 0.143591764 AKTQT(ph)PPVSPAPQPTEER ddPTM_A459_MK2206_30min_R1 5 AKTQTPPVSPAPQPTEER 18 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 AKT(0.351)QT(0.649)PPVSPAPQPTEER;AKT(0.192)QT(0.803)PPVS(0.006)PAPQPTEER;AKT(0.101)QT(0.899)PPVSPAPQPTEER;AKT(0.489)QT(0.51)PPVS(0.001)PAPQPTEER;AKT(0.26)QT(0.737)PPVS(0.003)PAPQPTEER 132.86 0.00064156 269783100 16057.6 16253.9 16585.9 13399 16364.4 15632.6 16704.4 15094.5 15018.1 13945.9 TRUE FALSE 14691.8168 15195.76816 15460.09532 14430.9933 15712.5713 16517.7043 15590.07995 14962.53038 16579.28524 15673.62338 0.93735931 0.969512141 0.986376599 0.920718391 1.002484934 1.053853592 0.994669808 0.954631231 1.057782546 1 13.93605112 -6.418587444 7.801470803 1.010404554 0.957168369 0.431039278 0.032137849 0.306483465 20.47991089 0.01003423 0.01136871 3.81E-07 6.418587444 -0.053236184 AKTQT(ph)PPVSPAPQPTEER ddPTM_A459_MK2206_30min_R2 3 AKTQTPPVSPAPQPTEER 18 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 AKT(0.151)QT(0.846)PPVS(0.003)PAPQPTEER;AKT(0.167)QT(0.829)PPVS(0.004)PAPQPTEER;AKT(0.25)QT(0.741)PPVS(0.009)PAPQPTEER 91.128 0.0075944 354787800 51317 65460 53607 69421 69220 56701 74528 60130 60486 66935 TRUE FALSE 55245.86898 62209.35159 55394.23062 63749.08223 66502.075 58858.79629 64742.38408 67989.19746 65746.96295 64750.91643 0.853205978 0.960748589 0.855497245 0.984527876 1.027044537 0.909003293 0.999868228 1.050011354 1.01538274 1 15.98261299 -5.407032406 0.442268439 1.021744458 0.823754204 0.500375301 0.046927384 2.699627474 0.617000403 0.038503429 0.265989876 3.92E-06 5.407032406 -0.197990254 AKTQT(ph)PPVSPAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A459_MK2206_30min_R1 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 AKT(0.224)QT(0.738)PPVS(0.038)PAPQPT(0.007)EERLPS(0.479)S(0.479)PVY(0.032)EDAAS(0.003)FK 73.616 3.36E-05 11729000 3268.8 3699.7 4003.3 3560.2 4229.8 3590.4 3474.3 3874.5 2239.1 1474.1 TRUE FALSE 2990.771395 3458.848858 3731.56715 3834.407221 4061.318109 3793.685345 3242.535786 3840.625655 2471.862458 1656.722637 1.805233615 2.087765798 2.252378924 2.314453328 2.451417044 2.28987355 1.957198938 2.318206783 1.492019486 1 10.69411638 -8.463252387 3.100574215 1.004520826 2.193052489 0.817397303 0.184147295 0.093321646 1.899721083 0.186373541 0.04975506 3.44E-09 8.463252387 1.188531663 AKTQT(ph)PPVSPAPQPTEERLPSSPVYEDAASFK ddPTM_A459_MK2206_30min_R2 2 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 AKT(0.067)QT(0.755)PPVS(0.176)PAPQPT(0.002)EERLPSSPVYEDAASFK;AKT(0.194)QT(0.8)PPVS(0.006)PAPQPTEERLPSSPVYEDAASFK 67.367 0.00026506 22386800 24845.7 64462 48346.9 62976.1 90266 62678 76271 51346 90618 48642 TRUE FALSE 26747.9059 61260.91082 49958.76152 57830.75118 86721.70329 65063.25521 66256.52608 58057.0985 98499.78984 47054.81552 0.568441414 1.301905238 1.061714109 1.229008137 1.842993163 1.382711939 1.408071105 1.233818428 2.093298821 1 15.52205475 -4.559471919 0.813042223 1.4810025 1.22E-11 0.38602011 0.316602414 3.655384 1.455371553 0.113760826 5.312596081 2.76E-05 4.559471919 -1.4810025 AKTQTPPVS(ph)PAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A459_MK2206_30min_R2 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 AKT(0.078)QT(0.208)PPVS(0.713)PAPQPT(0.015)EERLPS(0.407)S(0.407)PVY(0.165)EDAAS(0.007)FK 53.064 0.011157 7061700 5746.7 12940 10335 11993 14900 8449.2 11336 7119.6 13229 10564 TRUE FALSE 6186.67177 12297.41842 10679.56374 11013.13354 14314.95113 8770.740227 9847.569583 8050.156165 14379.63451 10219.29755 0.605391099 1.203352614 1.045038927 1.077680094 1.40077643 0.858252751 0.963624901 0.787740657 1.407105962 1 13.31900841 -4.751575524 24.98839784 1.073869711 0.60539015 0.348736501 0.195319532 472.9794051 1198129.839 0.047859194 0.622953636 1.77E-05 4.751575524 -0.468479561 AKTQTPPVSPAPQPT(ph)EERLPSSPVYEDAASFK ddPTM_A459_MK2206_30min_R2 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 AKTQTPPVSPAPQPT(0.71)EERLPS(0.144)S(0.144)PVY(0.002)EDAASFK 83.236 3.06E-06 4454500 589.92 7629.7 6583.1 8116.5 9697.7 7252.2 8372.5 4948.3 8889.5 4415.2 TRUE FALSE 635.0847288 7250.820193 6802.577268 7453.355987 9316.919571 7528.187553 7273.180693 5595.0598 9662.692641 4271.132386 0.148692354 1.697634149 1.592687057 1.745053844 2.181369887 1.762574154 1.702869412 1.309971056 2.262325718 1 12.0604029 -4.761272846 7.424407632 1.722239327 0.121948179 0.638772392 0.348338673 0.060720627 23.0966399 0.081590534 0.488092567 1.73E-05 4.761272846 -1.600291148 AKTQTPPVSPAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A459_MK2206_30min_R2 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 AKTQTPPVSPAPQPT(0.2)EERLPS(0.371)S(0.371)PVY(0.052)EDAAS(0.007)FK 66.399 9.06E-05 6307200 11453 35324 25099 32668 45077 36468 35760 23986 52403 22800 TRUE FALSE 12329.85049 33569.86153 25935.78813 29998.9199 43307.05049 37855.81529 31064.66904 27121.05256 56960.91822 22056.03787 0.559023817 1.522025929 1.175904226 1.360122796 1.963500913 1.716347039 1.40844286 1.229642999 2.582554426 1 14.42888603 -4.577682794 0.960124998 1.621728325 2.71E-17 0.299173187 0.439189969 3.777593552 2.137564035 0.142110598 6.98298172 2.64E-05 4.577682794 -1.621728325 AKVPAQANGT(ph)PTTK ddPTM_A459_MK2206_30min_R1 1 AKVPAQANGTPTTK 14 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 AKVPAQANGT(0.995)PT(0.004)TK 135.86 0.0073737 0 2174.3 1853.3 1788.5 1499 1769.8 1834.6 1800.8 1753.8 1736.2 1691.9 TRUE FALSE 1989.364367 1732.649833 1667.101603 1614.45324 1699.305118 1938.473467 1680.671918 1738.466712 1916.684203 1901.505345 1.046204983 0.911199034 0.876727277 0.849039548 0.893663077 1.019441503 0.883863893 0.914258125 1.007982548 1 10.89292628 AKVPAQANGTPT(ph)TK ddPTM_A459_MK2206_30min_R2 1 AKVPAQANGTPTTK 14 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 AKVPAQANGT(0.296)PT(0.481)T(0.223)K 92.679 0.021319 25105000 49910 52832 41326 45510 51527 46554 52557 42519 34968 45346 TRUE FALSE 53731.14797 50208.4397 42703.78821 41791.68742 49503.79108 48325.64509 45656.20277 48076.37929 38009.45343 43866.36373 1.224882653 1.144577198 0.973497336 0.952704621 1.128513669 1.101656052 1.040802083 1.095973662 0.866482886 1 15.4208275 -5.048103391 4.077338376 1.028943989 1.212883524 0.447081195 0.075088352 0.194422377 6.709817365 0.019730859 0.068073467 8.95E-06 5.048103391 0.183939535 AKY(ph)EALAK ddPTM_A459_MK2206_30min_R1 1 AKYEALAK 8 1 Q8WW32 Q8WW32 HMGB4 High mobility group protein B4 1 AKY(1)EALAK 134.48 0.025444 15370000 6194.2 6089.1 6159.9 6162.5 5986.2 5140.8 5594.8 5447.3 5168 5146.6 TRUE FALSE 5667.350763 5692.698483 5741.78315 6637.136818 5747.756978 5431.867653 5221.5811 5399.67483 5705.232094 5784.199663 0.979798605 0.98418084 0.992666831 1.14745984 0.993699615 0.939087163 0.902731822 0.933521515 0.98634771 1 12.49790164 -6.59595589 5.300185796 0.94599672 1.026296893 0.30874598 0.051453399 0.246054697 12.55304622 0.018097809 0.018147638 2.54E-07 6.59595589 0.080300172 ALAAAGYDVEK ddPTM_A459_MK2206_30min_R1 1 ALAAAGYDVEK 11 0 P10412;P22492;Q02539;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1T;HIST1H1A;HIST1H1D;HIST1H1C Histone H1.4;Histone H1t;Histone H1.1;Histone H1.3;Histone H1.2 0 167.12 0.0076903 10619000 1991.9 1846.7 1520.9 1121.9 2678.7 1728.3 1169.7 1244.7 1531 2663.6 FALSE TRUE 1822.478445 1726.479494 1417.665545 1208.308932 2572.001707 1826.154852 1091.671447 1233.817719 1690.152929 2993.586877 0.608794239 0.576726036 0.473567531 0.403632492 0.859170558 0.610022334 0.36467004 0.412153637 0.564591241 1 11.54765942 -8.580757321 20.75721467 1.000000001 0.537210772 0.509192339 0.135258451 6111.991159 2191963.26 0.139065667 0.035906601 2.63E-09 8.580757321 -0.462789229 ALAAGADS(ph)PK ddPTM_A459_MK2206_30min_R1 2 ALAAGADSPK 10 0 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 ALAAGADS(1)PK;ALAAGADS(1)PK 105.46 0.012497 47902000 11019.7 14604.9 13965.3 10680.2 7272.6 6650.1 9948.2 8564.7 12668 14873.1 TRUE FALSE 10082.41665 13654.11836 13017.37435 11502.79085 6982.916942 7026.622915 9284.57373 8489.819731 13984.88393 16715.69191 0.603170763 0.816844342 0.778751751 0.688143268 0.41774621 0.420360877 0.555440587 0.507895203 0.83663207 1 14.02891545 -8.477536823 4.082194754 0.998361591 0.602432037 0.518024454 0.127945066 0.174384557 6.430289732 0.1427771 0.03742078 3.33E-09 8.477536823 -0.395929555 ALAAGADS(ph)PK ddPTM_A459_MK2206_30min_R2 3 ALAAGADSPK 10 0 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 ALAAGADS(1)PK;ALAAGADS(1)PK;ALAAGADS(1)PK 120.03 0.0052145 97956000 731230 574820 619580 490990 461080 340755 642760 493950 401133 658740 TRUE FALSE 787213.531 546275.2747 640236.488 450874.5464 442975.6825 353722.6703 558364.8399 558510.961 436022.8233 637245.3677 1.235338177 0.857244795 1.004693828 0.707536797 0.695141471 0.555080803 0.876216397 0.876445698 0.684230667 1 19.28148946 -2.838869557 0.873931536 0.768719229 14.73511087 0.485566014 0.135154092 49.66913345 1.595832 0.046196422 1272.414479 0.001449207 2.838869557 13.96639164 ALAAGADS(ph)PKTEEARPSPAPGPGTPTGTPTR ddPTM_A459_MK2206_30min_R1 1 ALAAGADSPKTEEARPSPAPGPGTPTGTPTR 31 2 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 ALAAGADS(0.941)PKT(0.059)EEARPSPAPGPGTPTGTPTR 87.098 4.32E-07 23049000 1588.5 1840.3 1623.5 1749.5 1436 1125.7 1378 1400.5 1029.7 832.23 TRUE FALSE 1453.389733 1720.496136 1513.301343 1884.246793 1378.801079 1189.436161 1286.076134 1388.255576 1136.741 935.3329354 1.553874218 1.839447827 1.617927998 2.01451988 1.474128652 1.271671419 1.374992888 1.484236814 1.215333019 1 9.869336179 -6.488805014 6.015552308 1.311845705 1.753494824 0.652466841 0.166126458 0.123679441 13.37919916 0.050209867 0.05533913 3.24E-07 6.488805014 0.441649119 ALAAGADS(ph)PKTEEARPSPAPGPGTPTGTPTR ddPTM_A459_MK2206_30min_R2 1 ALAAGADSPKTEEARPSPAPGPGTPTGTPTR 31 2 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 ALAAGADS(0.571)PKT(0.429)EEARPSPAPGPGTPTGTPTR 91.617 5.16E-07 5633500 13200 25758 17131 16143 23445 17911 21837 14336 22370 17548 TRUE FALSE 14210.60215 24478.89518 17702.13899 14824.06526 22524.4315 18592.61566 18969.77567 16209.76442 24315.70216 16975.4102 0.837128646 1.442020834 1.042810676 0.873266984 1.326885845 1.095267533 1.117485554 0.954896773 1.43240734 1 14.05115882 -8.236461703 24.95720841 1.216204014 1.098900883 0.059513247 0.201711128 2133.483369 2131742.843 0.129049015 0.048733406 5.80E-09 8.236461703 -0.117303131 ALACSS(ph)LQERANVNLDVPLQDFPTPK ddPTM_A459_MK2206_30min_R2 1 ALACSSLQERANVNLDVPLQDFPTPK 26 1 Q92870-2;H0Y9U9 Q92870-2 APBB2 Amyloid beta A4 precursor protein-binding family B member 2 1 ALACS(0.228)S(0.772)LQERANVNLDVPLQDFPTPK 49.095 0.021784 5140000 1511.6 7142.2 3378.7 18868 9563.9 58868 4181.4 5604.5 27191 734.38 TRUE FALSE 1627.329258 6787.528734 3491.344172 17326.42404 9188.373231 61108.26299 3632.377157 6337.027393 29556.02403 710.4172407 2.2906669 9.554284925 4.914498089 24.38908159 12.93377005 86.01742678 5.113019433 8.920148653 41.60375387 1 9.472522784 -2.22709301 5.263843842 10 15.88126136 0 26.80418358 0 0 6.415077944 0 0.005927984 2.22709301 5.881261357 ALAEEASEEELPS(ph)DVDLNDPYFAEEVK ddPTM_A459_MK2206_30min_R1 3 ALAEEASEEELPSDVDLNDPYFAEEVK 27 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 ALAEEAS(0.002)EEELPS(0.998)DVDLNDPYFAEEVK;ALAEEAS(0.089)EEELPS(0.911)DVDLNDPYFAEEVK;ALAEEASEEELPS(1)DVDLNDPYFAEEVK 131.97 3.76E-12 9519900 2374.25 2714.71 2903.79 2590.7 2627.49 2454.73 2316.18 2660.87 2592.6 2495.75 TRUE FALSE 2172.30757 2537.981886 2706.688825 2790.236163 2522.831509 2593.714691 2161.671858 2637.606294 2862.110048 2804.942352 0.774457118 0.904824972 0.964971285 0.994757044 0.899423658 0.924694473 0.770665342 0.940342425 1.020381059 1 11.45375541 -11.56115143 0.013803488 1.982311692 4.32E-07 0.192528009 0.074457361 8264.339167 15.62328744 1256.550091 998.4611282 2.75E-12 11.56115143 -1.98231126 ALAEEASEEELPS(ph)DVDLNDPYFAEEVK ddPTM_A459_MK2206_30min_R2 1 ALAEEASEEELPSDVDLNDPYFAEEVK 27 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 ALAEEASEEELPS(1)DVDLNDPYFAEEVK 133.15 3.55E-12 1663200 13513 13473 12480 12568 14619 11177 19400 13297 12428 16499 TRUE FALSE 14547.56567 12803.95041 12896.07697 11541.1542 14044.98461 11602.34857 16852.7567 15034.96356 13508.96498 15960.63898 0.911465117 0.802220414 0.807992524 0.723101012 0.879976336 0.726935092 1.055894862 0.942002609 0.84639249 1 13.96223079 -7.256985541 24.99172455 0.956239374 0.807652809 0.508529094 0.073360015 324.7276832 1822143.199 0.028223893 0.021095655 5.53E-08 7.256985541 -0.148586565 ALAFS(ph)GK ddPTM_A459_MK2206_30min_R1 1 ALAFSGK 7 0 Q5VW00 Q5VW00 DCAF12L2 DDB1- and CUL4-associated factor 12-like protein 2 1 ALAFS(1)GK 85.306 0.036391 3042300 1799.4 1704 1988.7 1603.2 2249.4 1586.7 1830.8 1518 1465.1 1515.4 TRUE FALSE 1646.351581 1593.06929 1853.712585 1726.678742 2159.801635 1676.537583 1708.670672 1504.728286 1617.402388 1703.139193 0.966657093 0.935372339 1.088409328 1.013821271 1.268129842 0.984380836 1.003247814 0.883502824 0.949659543 1 10.73398063 -7.342071202 2.687712102 0.940696863 1.05034399 0.185422362 0.090560894 0.465429486 6.571657317 0.045397045 0.028704295 4.55E-08 7.342071202 0.109647127 ALAMPGRPES(ph)PPVFR ddPTM_A459_MK2206_30min_R1 2 ALAMPGRPESPPVFR 15 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ERU2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR 89.669 0.0089959 412290000 4439.4 4683.9 4691.5 4059.6 4668 4640.2 4916 4140.2 4158.5 3554 TRUE FALSE 4061.805718 4378.977259 4373.054051 4372.271095 4482.063675 4902.924114 4588.06261 4104.002668 4590.790956 3994.296351 1.016901442 1.096307553 1.094824637 1.094628618 1.122115958 1.227481309 1.148653531 1.027465743 1.149336592 1 11.96372566 -3.532739764 1.021951225 1.117038363 5.36E-11 0.159317724 0.060631187 35.22520734 3.915870872 0.019328847 75.95847179 0.000293265 3.532739764 -1.117038363 ALAMPGRPES(ph)PPVFR ddPTM_A459_MK2206_30min_R2 4 ALAMPGRPESPPVFR 15 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ERU2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR 104.16 0.0028516 277302000 92288 123573 102460 136187 133983 140340 137292 101740 115198 120901 TRUE FALSE 99353.64024 117436.5445 105875.9653 125060.0865 128722.1542 145680.737 119265.3955 115037.7673 125217.7138 116956.0103 0.849495806 1.004108675 0.905263141 1.069291661 1.100603158 1.245602827 1.019745759 0.983598595 1.07063941 1 16.83560648 -5.768729096 23.92974047 1.075749816 0.928071144 0.441767359 0.077057052 94.01859126 308634.106 0.022754674 0.03459146 1.70E-06 5.768729096 -0.147678672 ALANS(ph)LACQGK ddPTM_A459_MK2206_30min_R1 1 ALANSLACQGK 11 0 P04075;P04075-2;J3KPS3;H3BR68 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 ALANS(1)LACQGK 103.75 0.012979 4010900 1411.4 1510.6 1339.5 1564.2 1492.9 1537.2 1481.8 1237.8 1282.8 1094.2 TRUE FALSE 1291.353018 1412.259665 1248.578472 1684.674955 1433.434632 1624.234936 1382.951826 1226.978045 1416.151651 1229.757757 1.050087313 1.148404763 1.015304409 1.369924236 1.165623574 1.320776329 1.124572558 0.997739627 1.151569602 1 10.26415844 -7.5259719 24.11197549 1.057023927 1.181456985 0.220018292 0.108093867 99.71658971 777274.7443 0.050950181 0.02964547 2.98E-08 7.5259719 0.124433058 ALANS(ph)LACQGK ddPTM_A459_MK2206_30min_R2 2 ALANSLACQGK 11 0 P04075;P04075-2;J3KPS3;H3BR68 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 ALANS(1)LACQGK;ALANS(1)LACQGK 142.39 0.00092532 28024000 93248 96033 84235 104270 98996 72260 126595 89202 63265 100105 TRUE FALSE 100387.1386 91264.14087 87043.35286 95750.80746 95108.91963 75009.90493 109972.9244 100861.0077 68767.67534 96838.58205 1.036644036 0.942435741 0.898849932 0.988767136 0.982138706 0.774586981 1.135631296 1.041537428 0.710126831 1 16.56329433 -4.760342778 23.16442663 0.945116666 1.036644272 0.054817304 0.117613502 38.17482596 805388.3981 0.028493633 0.169033985 1.74E-05 4.760342778 0.091527605 ALANSLACQGK ddPTM_A459_MK2206_30min_R1 2 ALANSLACQGK 11 0 P04075;P04075-2;J3KPS3;H3BR68 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ; 166.97 0.0078113 28782000 4433.1 4355 4483.7 3942.6 4320.4 4167 3997.2 4044.3 3599.4 3706.5 FALSE TRUE 4056.041566 4071.488708 4179.358936 4246.259735 4148.309319 4402.931939 3730.554081 4008.941111 3973.570511 4165.689203 0.973678392 0.977386576 1.003281506 1.019341465 0.995827849 1.056951617 0.895543066 0.962371631 0.953880695 1 12.02433949 -7.260960742 24.99999979 0.949813153 1.003419981 0.378164175 0.03221384 46.00367082 2402936.435 0.012716401 0.009226031 5.48E-08 7.260960742 0.053606828 ALAPS(ph)PPAEFIYYCVDEDELKR ddPTM_A459_MK2206_30min_R1 2 ALAPSPPAEFIYYCVDEDELKR 22 1 K7EN65;K7EPZ6;A0A0A0MS90;Q9UIS9-4;Q9UIS9-11;Q9UIS9-7 K7EN65 MBD1 Methyl-CpG-binding domain protein 1 1 ALAPS(1)PPAEFIYYCVDEDELKR;ALAPS(0.992)PPAEFIY(0.005)Y(0.002)CVDEDELKR 96.562 0.00010128 18341600 3375.2 3583.9 4131.8 3107.6 3890.1 3042.65 4390.7 4492.6 4133.2 4121.3 TRUE FALSE 3088.121516 3350.587459 3851.344928 3346.94789 3735.14908 3214.922214 4097.804414 4453.321672 4562.860931 4631.877758 0.666710496 0.723375623 0.831486738 0.722589858 0.806400616 0.694086153 0.884696149 0.961450605 0.985099601 1 12.17738146 -7.514544875 2.767846207 0.981426569 0.746225874 0.839900579 0.047641609 0.107239126 1.654262039 0.025084767 0.014013608 3.06E-08 7.514544875 -0.235200695 ALAPS(ph)PPAEFIYYCVDEDELQPYTNRR ddPTM_A459_MK2206_30min_R1 1 ALAPSPPAEFIYYCVDEDELQPYTNRR 27 1 Q9UIS9-6;Q9UIS9-5;Q9UIS9;Q9UIS9-9;Q9UIS9-12 Q9UIS9-6 MBD1 Methyl-CpG-binding domain protein 1 1 ALAPS(0.621)PPAEFIY(0.189)Y(0.189)CVDEDELQPYTNRR 48.198 0.021064 4800400 446.07 194.99 404.67 403.77 446.81 409.87 357.16 441.51 227.84 236.4 TRUE FALSE 408.1294041 182.2961156 377.2021279 434.8684354 429.0126116 433.0764852 333.3345081 437.6499246 251.5247833 265.6870167 1.536128521 0.686131064 1.4197236 1.636769612 1.614729304 1.630025022 1.254613463 1.647238657 0.946695802 1 8.053583919 -8.279211139 24.18166986 0.973347651 1.417268991 0.302245843 0.276024657 831.3288185 1131156.053 0.276361466 0.072066286 5.26E-09 8.279211139 0.44392134 ALASNTSFFSGCS(ph)PIEEEAH ddPTM_A459_MK2206_30min_R1 5 ALASNTSFFSGCSPIEEEAH 20 0 O95239;Q2VIQ3 O95239 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B 1 ALASNTSFFS(0.025)GCS(0.975)PIEEEAH;ALASNTSFFSGCS(1)PIEEEAH;ALASNTSFFSGCS(1)PIEEEAH;ALASNTSFFS(0.002)GCS(0.998)PIEEEAH;ALASNTSFFS(0.001)GCS(0.999)PIEEEAH 184.99 2.77E-14 101240700 6757.85 6627.05 6956.9 5793.02 6868.28 6378.94 7098.69 5904.08 5404.36 5433.19 TRUE FALSE 6183.059371 6195.62784 6484.685011 6239.199404 6594.701864 6740.11007 6625.149342 5852.461251 5966.162562 6106.294596 1.012571417 1.014629698 1.061967272 1.021765214 1.079984229 1.103797068 1.084970474 0.958430872 0.977051216 1 12.57608148 -7.76719006 24.99975145 0.975805767 1.054661524 0.561997483 0.030614777 113.2265862 492214.8243 0.018022122 0.009027025 1.71E-08 7.76719006 0.078855757 ALASNTSFFSGCS(ph)PIEEEAH ddPTM_A459_MK2206_30min_R2 4 ALASNTSFFSGCSPIEEEAH 20 0 O95239;Q2VIQ3 O95239 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B 1 ALASNTSFFSGCS(1)PIEEEAH;ALASNTSFFS(0.049)GCS(0.951)PIEEEAH;ALASNTSFFS(0.017)GCS(0.983)PIEEEAH;ALASNTSFFS(0.002)GCS(0.998)PIEEEAH 163.71 2.95E-07 36969400 113845 136847 125876 131067 138781 123058 145982 118460 105026 134529 TRUE FALSE 122561.0607 130051.377 130072.643 120358.4068 133331.7606 127741.0584 126814.388 133943.1287 114160.9716 130139.3297 0.941768034 0.999324165 0.999487574 0.924842683 1.024530869 0.98157151 0.974450908 1.029228666 0.877221143 1 16.9896975 -6.274451838 24.96090412 0.982313012 0.971077074 0.021017391 0.044726517 5200.16526 9975093.973 0.0133351 0.015261104 5.32E-07 6.274451838 -0.011235938 ALDIDS(ph)DEESEPK ddPTM_A459_MK2206_30min_R1 4 ALDIDSDEESEPK 13 0 Q96DR7;Q96DR7-4;Q96DR7-3 Q96DR7 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 ALDIDS(1)DEESEPK;ALDIDS(1)DEESEPK;ALDIDS(1)DEESEPK;ALDIDS(1)DEESEPK 214.48 4.01E-21 10713900 10042.2 11643.4 12511.6 9647.5 8891.38 8292.68 9936.67 9388.95 11647.3 11287.5 TRUE FALSE 9188.058156 10885.41254 11662.34745 10390.55212 8537.217507 8762.204375 9273.812875 9306.8634 12858.07852 12685.88072 0.724274362 0.858073065 0.91931713 0.819064309 0.672970028 0.690705247 0.731034217 0.733639517 1.013573973 1 13.63093606 -8.266090092 24.60907343 1.006787042 0.771279918 0.630157256 0.07295663 246.1449453 1302436.232 0.072306147 0.021079711 5.42E-09 8.266090092 -0.235507124 ALDIDS(ph)DEESEPK ddPTM_A459_MK2206_30min_R2 2 ALDIDSDEESEPK 13 0 Q96DR7;Q96DR7-4;Q96DR7-3 Q96DR7 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 ALDIDS(1)DEESEPK;ALDIDS(1)DEESEPK 226.88 6.77E-13 10025000 68530 64699 66146 55217 57426 41551 69869 54959 48198 70715 TRUE FALSE 73776.70949 61486.14174 68351.27463 50705.59447 55171.1667 43132.25242 60695.11637 62142.33 52390.17492 68407.57534 1.078487421 0.898820656 0.999176981 0.741227769 0.806506683 0.630518655 0.887257238 0.908412989 0.765853411 1 16.06186848 -5.750409418 24.9912466 0.810501075 0.982827641 0.364382216 0.103472324 232.9642261 527836.2138 0.027819656 0.047604705 1.78E-06 5.750409418 0.172326566 ALDQASEEIWNDFR ddPTM_A459_MK2206_30min_R1 1 ALDQASEEIWNDFR 14 0 P50579-3;P50579;G3V1U3;F8VQZ7;F8VY03;F8VRR3;P50579-2;F8VZX9 P50579-3 METAP2 Methionine aminopeptidase 2 0 128.36 0.015799 2581500 739.71 540.14 662.91 667.61 685.56 696.77 894.1 689.14 551.34 656.28 FALSE TRUE 676.7937801 504.9767878 617.9135162 719.0294379 658.2526935 736.2205153 834.4562204 683.1149216 608.653766 737.5849211 0.917580825 0.684635455 0.837752371 0.97484292 0.892443263 0.998150171 1.131335791 0.926150877 0.825198223 1 9.526665352 -5.675061173 4.255546945 0.96660563 0.79269208 0.36345587 0.091704572 0.221198436 7.367146531 0.026132572 0.046390881 2.11E-06 5.675061173 -0.173913551 ALDQASEEIWNDFR ddPTM_A459_MK2206_30min_R2 1 ALDQASEEIWNDFR 14 0 P50579-3;P50579;G3V1U3;F8VQZ7;F8VY03;F8VRR3;P50579-2;F8VZX9 P50579-3 METAP2 Methionine aminopeptidase 2 0 136.99 0.0092412 0 2727.1 4017.7 3806.3 4226.2 3331.3 2399.1 3243.5 3563.4 2741.6 2841.3 FALSE TRUE 2935.888873 3818.18686 3933.200142 3880.905941 3200.496424 2490.399432 2817.624554 4029.148615 2980.059412 2748.588614 1.068144159 1.389144538 1.430989026 1.411963188 1.164414495 0.906064814 1.025116869 1.465897295 1.084214421 1 11.42447528 -6.396086598 5.597904925 1.112519306 1.335857701 0.292428261 0.166864139 0.32530461 13.49049179 0.055253015 0.062623536 4.02E-07 6.396086598 0.223338395 ALDSNS(ph)LENDDLSAPGR ddPTM_A459_MK2206_30min_R1 2 ALDSNSLENDDLSAPGR 17 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 ALDS(0.006)NS(0.994)LENDDLSAPGR;ALDSNS(0.769)LENDDLS(0.23)APGR 237.66 1.97E-22 10870700 2929.2 3123.7 2676.8 1656.65 2441.1 2416.59 2929.8 2573.3 3323.6 4029.2 TRUE FALSE 2680.056158 2920.346562 2495.106274 1784.24547 2343.865818 2553.415237 2734.358388 2550.801909 3669.100114 4528.367715 0.591837131 0.644900491 0.550994626 0.394015147 0.517596177 0.563871001 0.603828699 0.5632939 0.81024783 1 12.1447754 -8.455869071 1.984482104 1.000769428 0.547574416 0.843543573 0.063137289 0.127138563 1.092837808 0.067010077 0.018894689 3.50E-09 8.455869071 -0.453195012 ALDSNS(ph)LENDDLSAPGR ddPTM_A459_MK2206_30min_R2 2 ALDSNSLENDDLSAPGR 17 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 ALDS(0.216)NS(0.784)LENDDLSAPGR;ALDS(0.012)NS(0.968)LENDDLS(0.019)APGR 209.73 3.87E-09 14249400 46293 35905 31130 35549 28062 27117 35664 30417 27231 32121 TRUE FALSE 49837.22767 34122.00991 32167.85866 32644.53298 26960.14488 28148.95644 30981.27396 34392.60634 29599.50316 31072.8944 1.603881088 1.098127824 1.035238567 1.050579086 0.867641892 0.905900689 0.997051435 1.106836264 0.952582749 1 14.92336901 -4.218777576 1.409540952 0.98260994 3.289492731 0.88604601 0.065802335 1.712955616 1.017148056 0.020313215 8.279828751 6.04E-05 4.218777576 2.306882791 ALDSNS(ph)LENDDLSAPGREPGHFNPESR ddPTM_A459_MK2206_30min_R1 2 ALDSNSLENDDLSAPGREPGHFNPESR 27 1 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 ALDS(0.067)NS(0.933)LENDDLSAPGREPGHFNPESR;ALDS(0.072)NS(0.794)LENDDLS(0.134)APGREPGHFNPESR 145.03 7.14E-14 25741000 796.15 493.09 651.15 340.57 909.75 945.63 925.36 608.45 656.84 461.53 TRUE FALSE 728.4332617 460.9897514 606.9517522 366.8007604 873.5127311 999.1707534 863.6309228 603.1303858 725.1208685 518.7078208 1.404322882 0.888727204 1.170122616 0.707143301 1.68401689 1.926268919 1.664966072 1.162755528 1.397937026 1 9.018778312 -6.273930209 24.95906829 1.513091196 1.040699833 0.32403091 0.300929112 850.0154377 1698490.291 0.095554643 0.10909866 5.32E-07 6.273930209 -0.472391363 ALDSNS(ph)LENDDLSAPGREPGHFNPESR ddPTM_A459_MK2206_30min_R2 1 ALDSNSLENDDLSAPGREPGHFNPESR 27 1 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 ALDS(0.311)NS(0.676)LENDDLS(0.011)APGREPGHFNPES(0.002)R 53.28 0.0077297 9194600 3557.2 7819.5 6279.2 8553.8 9001.7 8790 6673.2 6596.1 8247.9 6000.8 TRUE FALSE 3829.541967 7431.195001 6488.545394 7854.927178 8648.248028 9124.509609 5797.000824 7458.232918 8965.287433 5804.994387 0.65969779 1.280138189 1.117752225 1.353132605 1.489794382 1.5718378 0.998622985 1.284795888 1.54440932 1 12.50307896 -4.514940085 1.911408759 1.316100078 6.80E-16 0.471766131 0.198796846 1.812756938 3.698151694 0.053503915 5.417649278 3.06E-05 4.514940085 -1.316100078 ALDVMVS(ph)TFHK ddPTM_A459_MK2206_30min_R2 1 ALDVMVSTFHK 11 0 P26447 P26447 S100A4 Protein S100-A4 1 ALDVMVS(0.691)T(0.309)FHK 75.02 0.035766 2899600 13859 20238 18065 17872 14355 18401 17086 17643 19540 16379 TRUE FALSE 14920.0557 19233.01035 18667.27808 16411.80043 13791.35057 19101.26295 14842.58768 19949.00068 21239.55388 15844.55457 0.941651949 1.213856171 1.178151017 1.035800682 0.870415796 1.205541176 0.936762697 1.259044588 1.340495486 1 13.95169948 -7.784103083 24.99993283 1.224827613 1.063473178 0.180629924 0.137833093 375.1861956 413855.3722 0.073641394 0.035415284 1.64E-08 7.784103083 -0.161354436 ALDVMVSTFHK ddPTM_A459_MK2206_30min_R2 1 ALDVMVSTFHK 11 0 P26447 P26447 S100A4 Protein S100-A4 0 105.46 0.017576 0 9382.5 12575 9565.3 13822 14015 15453 13622 11338 14467 10370 FALSE TRUE 10100.83141 11950.54379 9884.202328 12692.69839 13464.70068 16041.07474 11833.41504 12819.91553 15725.31351 10031.62775 1.006898548 1.191286607 0.985303938 1.26526808 1.342224913 1.599050039 1.179610661 1.277949686 1.567573469 1 13.2922681 -5.924779887 4.74781241 1.344715763 1.075594291 0.323911289 0.170812236 0.234611662 9.861542965 0.04725515 0.071212349 1.19E-06 5.924779887 -0.269121472 ALDVS(ph)ASDDEIAR ddPTM_A459_MK2206_30min_R1 1 ALDVSASDDEIAR 13 0 C9JLK2;H7C393;H7C1U0;C9JIF9;P13798 C9JLK2 APEH Acylamino-acid-releasing enzyme 1 ALDVS(0.648)AS(0.352)DDEIAR 198.37 0.0001526 12316000 2077 2059.5 2285.6 1854.8 2489 2058.9 2042.9 1984.2 1936.6 1571.5 TRUE FALSE 1900.340243 1925.426176 2130.45984 1997.657017 2389.857859 2175.473139 1906.621868 1966.852349 2137.9165 1766.189284 1.075955029 1.090158452 1.206246612 1.131054885 1.353115366 1.231732724 1.079511627 1.113613567 1.210468504 1 10.78642425 -11.00831303 6.00415523 0.999864039 1.167088339 0.26583689 0.082614339 0.000160679 1.38E-05 0.085482522 0.020715774 9.81E-12 11.00831303 0.1672243 ALDVSAS(ph)DDEIAR ddPTM_A459_MK2206_30min_R1 1 ALDVSASDDEIAR 13 0 C9JLK2;H7C393;H7C1U0;C9JIF9;P13798 C9JLK2 APEH Acylamino-acid-releasing enzyme 1 ALDVS(0.133)AS(0.867)DDEIAR 214.61 1.71E-06 12327000 2784.5 2763.3 2936.7 2113.9 2930.9 2679.4 2875.5 2533.6 2165.6 1759.8 TRUE FALSE 2547.663653 2583.408668 2737.364986 2276.712944 2814.156047 2831.105313 2683.680642 2511.449002 2390.72187 1977.81731 1.288118797 1.306191757 1.384033284 1.151123986 1.422859449 1.431429131 1.356890057 1.269808384 1.208767796 1 10.94969346 -8.608107293 1.499591507 1.001791298 1.333713268 0.636680094 0.076476119 0.332247895 1.606952003 0.075442516 0.022129429 2.47E-09 8.608107293 0.33192197 ALDVSAS(ph)DDEIAR ddPTM_A459_MK2206_30min_R2 4 ALDVSASDDEIAR 13 0 C9JLK2;H7C393;H7C1U0;C9JIF9;P13798 C9JLK2 APEH Acylamino-acid-releasing enzyme 1 ALDVS(0.063)AS(0.937)DDEIAR;ALDVS(0.046)AS(0.954)DDEIAR;ALDVS(0.335)AS(0.665)DDEIAR;ALDVS(0.025)AS(0.975)DDEIAR 195.71 0.00011855 42778100 93332 105696 99596 115796 127970 132879 122456 84638 108873 121941 TRUE FALSE 100477.5697 100447.2903 102916.4809 106335.0964 122945.2548 137935.8035 106377.3801 95700.47721 118342.5767 117962.0752 0.851778587 0.8515219 0.872453971 0.901434603 1.042243913 1.169323304 0.901793055 0.811281737 1.003225626 1 16.84796358 -6.047345055 4.690645248 0.983193575 0.861102017 0.316498789 0.086838237 0.30306594 14.79764164 0.028975611 0.03930393 8.97E-07 6.047345055 -0.122091559 ALEAELDAQHLSETFDNIDNLS(ph)PK ddPTM_A459_MK2206_30min_R1 2 ALEAELDAQHLSETFDNIDNLSPK 24 0 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7 P25054-2 APC Adenomatous polyposis coli protein 1 ALEAELDAQHLSET(0.001)FDNIDNLS(0.999)PK;ALEAELDAQHLSET(0.001)FDNIDNLS(0.999)PK 130.71 7.60E-08 7561000 2790.71 1507.03 2046.46 1541.4 2989.06 3190.9 2630.88 2264.5 1834.46 1272.46 TRUE FALSE 2553.34546 1408.922073 1907.551997 1660.118895 2869.999411 3371.566 2455.378796 2244.701715 2025.158682 1430.101951 1.785428974 0.985189952 1.333857349 1.160839543 2.006849517 2.35757038 1.716925701 1.569609574 1.416093922 1 10.48190228 -6.250898268 24.89925858 1.742262651 1.293928185 0.161155013 0.38634183 1047.394495 2474059.245 0.116234201 0.148444794 5.61E-07 6.250898268 -0.448334466 ALEATTEHIR ddPTM_A459_MK2206_30min_R1 1 ALEATTEHIR 10 0 Q9Y490 Q9Y490 TLN1 Talin-1 0 166.66 5.11E-05 0 1340.5 1547.7 1479 1209.4 1349.9 1434.6 1549.4 1327.4 1266.2 1225.6 FALSE TRUE 1226.483436 1446.944449 1378.609601 1302.548198 1296.130625 1515.825812 1446.042353 1315.794682 1397.826021 1377.436581 0.890410094 1.050461755 1.000851596 0.945632064 0.940972995 1.100468677 1.049806846 0.95524883 1.014802453 1 10.42777018 ALEEGDGSVSGSS(ph)PR ddPTM_A459_MK2206_30min_R1 2 ALEEGDGSVSGSSPR 15 0 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 ALEEGDGSVSGS(0.015)S(0.985)PR;ALEEGDGSVSGS(0.002)S(0.998)PR 282.73 2.21E-55 125694000 5781.9 5370.5 5150.6 4723.5 5349.6 5719.8 5458.2 4972.8 4602.6 4450.3 TRUE FALSE 5290.119043 5020.879474 4800.991622 5087.304788 5136.514104 6043.650133 5094.093437 4929.323334 5081.056741 5001.636762 1.057677575 1.003847283 0.959884104 1.017127998 1.026966641 1.208334475 1.018485284 0.985542047 1.015878798 1 12.28818457 -4.459325465 12.81114901 1.0290001 1.244615957 0.019759723 0.063818433 1469326.831 10124871.26 0.017064748 7825639.133 3.47E-05 4.459325465 0.215615857 ALEEGDGSVSGSS(ph)PR ddPTM_A459_MK2206_30min_R2 2 ALEEGDGSVSGSSPR 15 0 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 ALEEGDGSVS(0.001)GS(0.047)S(0.952)PR;ALEEGDGSVSGSS(1)PR 278.85 4.32E-55 344100000 832520 1040220 918410 1084220 1070930 1057550 1001800 743070 904610 878920 TRUE FALSE 896258.3713 988564.1874 949029.331 995635.7578 1028879.907 1097795.806 870262.4566 840191.8003 983291.3426 850240.9124 1.054122847 1.162687155 1.116188738 1.171004292 1.210103974 1.29115853 1.023548084 0.988180865 1.156485566 1 19.69751216 -7.304613072 24.95659837 1.041068648 1.16708101 0.426848476 0.071233614 477.3267089 275917.3351 0.030530676 0.020583954 4.96E-08 7.304613072 0.126012362 ALEESESSQLIS(ph)PPLAQAIR ddPTM_A459_MK2206_30min_R2 2 ALEESESSQLISPPLAQAIR 20 0 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 ALEESES(0.001)S(0.006)QLIS(0.994)PPLAQAIR;ALEESESSQLIS(1)PPLAQAIR 101.54 0.00069407 1666300 5163.7 5187.5 3959.68 9846 5118.7 5248.9 7598.1 4255.7 4012.2 5515.9 TRUE FALSE 5559.036842 4929.896293 4091.693755 9041.550304 4917.714119 5448.650568 6600.460343 4811.934602 4361.173904 5335.916635 1.041814785 0.923908043 0.766821155 1.694469933 0.921624991 1.021127379 1.236987156 0.901800933 0.81732422 1 12.38152041 -7.872743995 10.51900391 0.892566439 1.082544725 0.105812259 0.239101341 0.787877007 70.08876987 0.131671574 0.063203242 1.34E-08 7.872743995 0.189978287 ALEHFTDLYDIKR ddPTM_A459_MK2206_30min_R1 1 ALEHFTDLYDIKR 13 1 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 103.43 0.0057305 8727800 6511.3 5245.4 6056 7661.3 6490.9 5720.1 5907.8 5859 4245.1 3724.8 FALSE TRUE 5957.479743 4903.923507 5644.935593 8251.374653 6232.353708 6043.967119 5513.701441 5807.775381 4686.393336 4186.256345 1.423104381 1.171434117 1.348444798 1.97106292 1.488765425 1.443764218 1.317095989 1.387343465 1.119471181 1 12.03144494 -8.258826558 1.113640286 0.995169151 1.472576979 0.401532496 0.193589343 0.532287295 1.333386617 0.198685038 0.066071141 5.51E-09 8.258826558 0.477407828 ALEIS(ph)PR ddPTM_A459_MK2206_30min_R2 3 ALEISPR 7 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 ALEIS(1)PR;ALEIS(1)PR;ALEIS(1)PR 98.582 0.021764 23371500 85565 102942 82940 127757 105320 100441 103219 87080 82536 92454 TRUE FALSE 92115.92219 97830.04997 85705.1782 117318.8444 101184.6076 104263.3526 89666.22131 98461.65499 89714.83209 89437.23355 1.029950486 1.093840295 0.958271794 1.311745006 1.13134769 1.165771217 1.002560318 1.100902287 1.003103836 1 16.44858794 -7.884420247 1.25297062 1.006305035 1.112122461 0.153864344 0.091967003 0.950371166 2.688690314 0.082984487 0.030106536 1.30E-08 7.884420247 0.105817426 ALENDFFNS(ph)PPR ddPTM_A459_MK2206_30min_R1 3 ALENDFFNSPPR 12 0 F5H148;H3BMT1;Q9NYV6-2;A6NIE6;Q9NYV6-3;Q9NYV6 F5H148 RRN3;RRN3P2 RNA polymerase I-specific transcription initiation factor RRN3;Putative RRN3-like protein RRN3P2 1 ALENDFFNS(1)PPR;ALENDFFNS(1)PPR;ALENDFFNS(1)PPR 193.45 0.0001557 23629400 3396.59 3061.81 3905.2 3262.13 4310.7 5510.4 6717.9 7028.1 6126.8 6000.8 TRUE FALSE 3107.692184 2862.485612 3640.125905 3513.379818 4138.995691 5822.394086 6269.761149 6966.654063 6763.702785 6744.224408 0.460793117 0.424435108 0.539739736 0.520946458 0.613709663 0.863315592 0.929648951 1.032980761 1.002888157 1 12.71943683 -6.770998961 1.203509945 1.016772527 0.465284759 0.98145852 0.032087037 0.054481472 0.166484578 0.016339374 0.014597985 1.69E-07 6.770998961 -0.551487768 down ALES(ph)PERPFLAILGGAK ddPTM_A459_MK2206_30min_R1 4 ALESPERPFLAILGGAK 17 1 P00558-2;P00558 P00558-2 PGK1 Phosphoglycerate kinase 1 1 ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK 124.04 0.0062965 200294000 10554.08 10725.42 11306.11 10132.68 11842.2 9638.41 10487.09 10636.36 9716.01 9207.76 TRUE FALSE 9656.400074 10027.19321 10538.68275 10913.10077 11370.5001 10184.12844 9787.515361 10543.36743 10726.02401 10348.48682 0.933121937 0.968952599 1.018379105 1.054560049 1.098759683 0.984117641 0.945791933 1.018831797 1.036482356 1 13.33713221 -5.075533283 2.737262059 1.020569262 0.935151092 0.352394038 0.038621619 0.365647674 4.996345597 0.011472752 0.051359986 8.40E-06 5.075533283 -0.08541817 ALES(ph)PERPFLAILGGAK ddPTM_A459_MK2206_30min_R2 4 ALESPERPFLAILGGAK 17 1 P00558-2;P00558 P00558-2 PGK1 Phosphoglycerate kinase 1 1 ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK 123.14 0.0011605 195824700 447087.7 490303.7 442909.9 571380 508622.2 443053.4 532337.7 418327.1 433389.7 484607.6 TRUE FALSE 481317.0781 465955.9312 457676.295 524696.4262 488651.1368 459914.1076 462441.1205 473003.8883 471085.1527 468794.8937 1.026711435 0.993944127 0.976282594 1.119245182 1.042355929 0.981056137 0.986446582 1.008978329 1.004885418 1 18.83859733 -6.757268697 24.99954478 0.996220268 1.031393874 0.195963322 0.035884952 205.4492367 1231488.505 0.013078848 0.012638221 1.75E-07 6.757268697 0.035173606 ALESPERPFLAILGGAK ddPTM_A459_MK2206_30min_R1 2 ALESPERPFLAILGGAK 17 1 P00558-2;P00558 P00558-2 PGK1 Phosphoglycerate kinase 1 0 ; 186.08 1.67E-07 29368700 10000.1 9930.8 10779.5 10630.4 9183 8799.5 9549 9256 8654.5 7646.4 FALSE TRUE 9149.538982 9284.303115 10047.81757 11449.15525 8817.221665 9297.720086 8912.003633 9175.075768 9554.166245 8593.693759 1.064680595 1.080362342 1.169208242 1.332274057 1.02601069 1.0819236 1.037039937 1.067652167 1.111764803 1 13.06906265 ALEYSNGIFDCQS(ph)PTSPFMGSLR ddPTM_A459_MK2206_30min_R1 2 ALEYSNGIFDCQSPTSPFMGSLR 23 0 Q86W92-2;Q86W92-4;Q86W92;F5H6Q7;F5H0E0;F5H495;A0A0A0MTP2;Q86W92-5 Q86W92-2 PPFIBP1 Liprin-beta-1 1 ALEYSNGIFDCQS(0.991)PT(0.006)S(0.002)PFMGSLR;ALEYSNGIFDCQS(0.921)PT(0.058)S(0.021)PFMGSLR 184.27 1.45E-17 25157000 5427.1 4810.1 5825.5 4890 5882.7 4673.8 5538.6 4874.4 4687.7 4066.4 TRUE FALSE 4965.496646 4496.961616 5430.081291 5266.628647 5648.379602 4938.426517 5169.1301 4831.783635 5175.00319 4570.176332 1.086500014 0.983979893 1.188155751 1.152390688 1.235921591 1.0805768 1.131057037 1.057242278 1.132342127 1 12.15803411 -10.04900911 10.05372551 1.00002269 1.116877134 0.215580472 0.066642441 0 0 0.067447036 0.016358309 8.93E-11 10.04900911 0.116854444 ALEYSNGIFDCQS(ph)PTSPFMGSLR ddPTM_A459_MK2206_30min_R2 2 ALEYSNGIFDCQSPTSPFMGSLR 23 0 Q86W92-2;Q86W92-4;Q86W92;F5H6Q7;F5H0E0;F5H495;A0A0A0MTP2;Q86W92-5 Q86W92-2 PPFIBP1 Liprin-beta-1 1 ALEYSNGIFDCQS(0.999)PTSPFMGSLR;ALEYSNGIFDCQS(0.96)PT(0.03)S(0.01)PFMGSLR 128.91 5.65E-06 6004000 21285.2 26547.5 25649.7 24096 24505.6 29101 24813.7 24365.5 22635.2 21569 TRUE FALSE 22914.81128 25229.18975 26504.8482 22127.27972 23543.38701 30208.45895 21555.63138 27550.15451 24603.96878 20865.2053 1.098230808 1.209151283 1.270289356 1.060487036 1.128356356 1.44779112 1.03308983 1.320387416 1.179186518 1 14.3488115 -8.567661481 21.58673293 0.999999998 1.198502757 0.191882605 0.119854922 8056.612859 3883543.375 0.110896968 0.028633474 2.71E-09 8.567661481 0.198502759 ALGLAVPPS(ph)PPSAATAASK ddPTM_A459_MK2206_30min_R2 1 ALGLAVPPSPPSAATAASK 19 0 Q9H4Z2-2;Q9H4Z2 Q9H4Z2-2 ZNF335 Zinc finger protein 335 1 ALGLAVPPS(0.996)PPS(0.002)AAT(0.001)AASK 106.31 0.00082734 5904100 38651 41626 36722 38364 42865 37309 44633 38632 41391 44299 TRUE FALSE 41610.15028 39558.91337 37946.29315 35229.53848 41181.90472 38728.82014 38772.63349 43681.33504 44991.11436 42853.52726 0.970985423 0.92311919 0.88548821 0.822091919 0.960992183 0.903748714 0.904771111 1.019317145 1.049881241 1 15.38712634 -7.77511928 6.719709381 1.026957938 0.907892611 0.622247056 0.04026403 0.099622204 19.16821473 0.022055031 0.01112142 1.68E-08 7.77511928 -0.119065327 ALGVISNFQSS(ph)PK ddPTM_A459_MK2206_30min_R2 2 ALGVISNFQSSPK 13 0 Q6N039;E9PC87;O94876-2;O94876 Q6N039 DKFZp686H13261;TMCC1 Transmembrane and coiled-coil domains protein 1 1 ALGVISNFQS(0.023)S(0.977)PK;ALGVISNFQS(0.184)S(0.816)PK 209.25 8.67E-06 5882100 144617 60216 70234 60969 46936 52149 112962 51728 51992 80656 TRUE FALSE 155688.9887 57225.761 72575.56651 55987.63767 45093.05681 54133.56674 98129.95371 58489.02721 56514.17018 78024.20133 1.995393558 0.733436037 0.930167375 0.717567584 0.577936794 0.693804817 1.257686103 0.749626734 0.724315907 1 16.25163406 -4.759034329 24.99999853 0.815012866 1.995395098 0.783609464 0.185199535 29.72819735 308951.8353 0.047355233 0.309927291 1.74E-05 4.759034329 1.180382232 ALGVS(ph)NFSHFQIEK ddPTM_A459_MK2206_30min_R1 2 ALGVSNFSHFQIEK 14 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 ALGVS(0.915)NFS(0.085)HFQIEK;ALGVS(0.942)NFS(0.058)HFQIEK 88.486 0.013711 28505000 11848.5 12563.9 10552.2 9325 12681.2 11520 11107.7 8746.3 9951.6 8379.4 TRUE FALSE 10840.72286 11745.98783 9835.946064 10043.21312 12176.08095 12172.25244 10366.7256 8669.832021 10986.10443 9417.503333 1.151124929 1.247250721 1.044432448 1.066441153 1.29292027 1.292513739 1.100793409 0.920608331 1.166562309 1 13.20112892 -7.521265045 24.99008508 1.028291346 1.180350068 0.338492792 0.096719324 76.64717555 1187037.216 0.046484509 0.027337409 3.01E-08 7.521265045 0.152058722 ALGVSNFS(ph)HFQIEK ddPTM_A459_MK2206_30min_R1 1 ALGVSNFSHFQIEK 14 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 ALGVS(0.003)NFS(0.997)HFQIEK 89.468 0.012886 12280000 4857.3 4960.8 4343.9 3959.5 5946.7 5147 5270.6 4189.7 3661.4 2874.9 TRUE FALSE 4444.161128 4637.851018 4049.048171 4264.461376 5709.830347 5438.418692 4919.007891 4153.069895 4042.015632 3231.064316 1.375448055 1.435394212 1.253162356 1.319831782 1.767167035 1.683166338 1.52241101 1.285356616 1.250985817 1 11.65779375 -8.371285701 1.518671594 1.017018311 1.477536136 0.486603346 0.152674435 0.364057514 1.73342178 0.163755441 0.049045368 4.25E-09 8.371285701 0.460517826 ALGVSNFS(ph)HFQIEK ddPTM_A459_MK2206_30min_R2 3 ALGVSNFSHFQIEK 14 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 ALGVS(0.001)NFS(0.999)HFQIEK;ALGVS(0.001)NFS(0.999)HFQIEK;ALGVSNFS(1)HFQIEK 132.44 0.0011748 18315600 110207 136798.1 113955.6 171651.4 144871 151008 164476 135071.2 119919 139042.4 TRUE FALSE 118644.5327 130004.9053 117754.8228 157626.9315 139182.6366 156754.7153 142880.1036 152725.4696 130349.3379 134505.4579 0.882079691 0.96654 0.875465016 1.171899892 1.034773152 1.165415276 1.062262498 1.135459274 0.969100733 1 17.03730519 -5.751016288 24.99999565 1.083943448 0.913879378 0.56717812 0.067387741 140.9669 338108.7833 0.017033644 0.029095567 1.77E-06 5.751016288 -0.17006407 ALGVSNFSHFQIEK ddPTM_A459_MK2206_30min_R1 2 ALGVSNFSHFQIEK 14 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 160.46 0.00040818 33874000 14909.9 13802.1 15251.6 12700.2 17743.6 16355.7 17179.2 15300.6 10708.1 10783.5 FALSE TRUE 13641.73471 12903.58078 14216.36389 13678.3716 17036.83484 17281.7456 16033.20691 15166.82847 11821.24531 12119.44139 1.125607548 1.064700952 1.173021382 1.128630534 1.405744233 1.425952323 1.322932831 1.251446166 0.975395229 1 13.56503558 -6.050606223 24.7139654 1.258141811 1.12136168 0.100071847 0.143760066 585.9480293 286151.1324 0.043792952 0.056537366 8.90E-07 6.050606223 -0.136780131 ALGVSNFSHFQIEK ddPTM_A459_MK2206_30min_R2 2 ALGVSNFSHFQIEK 14 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 153 0.00052235 6677100 36241 53261 48718 59125 59816 58452 59752 46019 45829 49134 FALSE TRUE 39015.63882 50616.13619 50342.2338 54294.29837 57467.32329 60676.43182 51906.49062 52033.84131 49815.12358 47530.7616 0.820850277 1.064913216 1.059150582 1.142298094 1.209055385 1.27657184 1.092060991 1.094740323 1.048060706 1 15.5365739 -4.181395179 1.237816046 1.131767697 1.77E-10 0.567351893 0.076360984 4.094779856 1.900660735 0.023812338 8.522114328 6.59E-05 4.181395179 -1.131767697 ALHS(ph)FITPPTTPQLR ddPTM_A459_MK2206_30min_R2 1 ALHSFITPPTTPQLR 15 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;J3QR75 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 ALHS(0.993)FIT(0.003)PPT(0.002)T(0.002)PQLR 90.827 0.015164 8398300 13733 18704 13716 18254 16183 14295 18440 11674 17415 18061 TRUE FALSE 14784.40904 17775.18656 14173.28459 16762.58981 15547.57411 14839.00624 16018.80585 13199.83188 18929.72522 17471.67105 0.846193189 1.017371865 0.81121517 0.959415374 0.889873331 0.849318088 0.91684452 0.755499107 1.083452474 1 14.09272998 -8.283973164 24.98684992 1.041726271 0.886041001 0.439290399 0.072562955 830.0554349 920407.6064 0.065190871 0.016881173 5.20E-09 8.283973164 -0.15568527 ALHSFIT(ph)PPTTPQLR ddPTM_A459_MK2206_30min_R1 1 ALHSFITPPTTPQLR 15 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;J3QR75 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 ALHSFIT(0.999)PPT(0.001)TPQLR 89.877 0.021886 43954000 2225.3 2170.7 2241.3 1756.2 2080.6 1815.5 2132.4 1670.3 1761 1624.5 TRUE FALSE 2036.026549 2029.387035 2089.166801 1891.462828 1997.725296 1918.292041 1990.151487 1655.696743 1944.062252 1825.755324 1.115169444 1.111532859 1.144275343 1.035989217 1.094191138 1.050684073 1.090042822 0.906855766 1.064798895 1 10.83427772 -6.935789485 0.669576049 0.992085739 1.119191213 0.43109463 0.049226195 0.673144674 0.643424254 0.038171018 0.03377992 1.16E-07 6.935789485 0.127105474 ALHSFIT(ph)PPTTPQLR ddPTM_A459_MK2206_30min_R2 1 ALHSFITPPTTPQLR 15 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;J3QR75 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 ALHSFIT(0.998)PPT(0.001)T(0.001)PQLR 84.895 0.028847 33678000 22009 22879 23965 19090 24060 20458 28506 23281 19012 26194 TRUE FALSE 23694.02596 21742.86213 24763.98114 17530.28593 23115.28351 21236.54353 24763.12796 26323.90664 20665.62939 25339.29193 0.935070563 0.858069049 0.977295704 0.691822249 0.912230838 0.838087488 0.977262034 1.038857231 0.815556704 1 14.62908859 -7.266291824 24.81510897 0.961157099 0.867142977 0.193152612 0.089134471 609.4658193 3116756.029 0.035382433 0.024700911 5.42E-08 7.266291824 -0.094014122 ALINADELASDVAGAEALLDR ddPTM_A459_MK2206_30min_R1 1 ALINADELASDVAGAEALLDR 21 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 212.55 4.80E-41 0 147.28 65.551 108.96 117.54 152.52 125.71 280.14 123.72 43.294 60.913 FALSE TRUE 134.7530626 61.28361799 101.5640988 126.5929512 146.4448054 132.8275916 261.4523717 122.6383291 47.79456623 68.45936231 1.968365729 0.895182425 1.483567701 1.849169301 2.139149424 1.940239977 3.819088623 1.791403322 0.698145069 1 6.097175949 -5.823849918 3.204580677 2.032623869 1.380826112 0.042087164 0.818740196 0.604417552 12.53219935 0.246179463 0.406114859 1.50E-06 5.823849918 -0.651797757 ALIQTCLNS(ph)PDSPPR ddPTM_A459_MK2206_30min_R1 1 ALIQTCLNSPDSPPR 15 0 P11831 P11831 SRF Serum response factor 1 ALIQTCLNS(0.601)PDS(0.399)PPR 140.77 0.00038816 9067600 521.56 429.89 572.64 392.35 521.15 559.93 835.63 276.1 627.55 692.8 TRUE FALSE 477.1985832 401.9040829 533.7707923 422.568865 500.3914919 591.6327527 779.8866474 273.6860868 692.7860682 778.6292944 0.612870061 0.516168716 0.685526214 0.542708665 0.642656904 0.759838805 1.001614829 0.35149729 0.889750839 1 9.604792814 -6.679065539 3.76981837 0.773270297 0.591504376 0.240436123 0.176822786 0.394173502 10.88197939 0.059849704 0.058616894 2.09E-07 6.679065539 -0.181765922 ALIQTCLNSPDS(ph)PPR ddPTM_A459_MK2206_30min_R2 4 ALIQTCLNSPDSPPR 15 0 P11831 P11831 SRF Serum response factor 1 ALIQTCLNS(0.004)PDS(0.996)PPR;ALIQTCLNS(0.008)PDS(0.992)PPR;ALIQTCLNS(0.023)PDS(0.977)PPR;ALIQTCLNS(0.002)PDS(0.998)PPR 184.22 2.11E-05 42070500 111774 99690 94832 108476 92117 96021 102035 82031 87056 101093 TRUE FALSE 120331.5034 94739.53956 97993.65155 99613.1638 88500.02373 99675.14644 88637.68193 92752.73335 94627.97352 97794.34369 1.230454634 0.968762977 1.002038031 1.018598418 0.904960557 1.019232224 0.906368186 0.94844681 0.967622154 1 16.5774634 -4.761407825 24.06545459 0.968991613 1.230454989 0.796790019 0.039350002 0.199394693 148039.2282 0.009623522 0.05372109 1.73E-05 4.761407825 0.261463376 ALIQTCLNSPDS(ph)PPRSDPTTDQR ddPTM_A459_MK2206_30min_R1 1 ALIQTCLNSPDSPPRSDPTTDQR 23 1 P11831 P11831 SRF Serum response factor 1 ALIQTCLNSPDS(0.609)PPRS(0.35)DPT(0.02)T(0.02)DQR 111.82 7.76E-06 13796000 1477.4 1340.2 1409.2 1485 1359 1253.4 1204.5 1585.3 1113.9 751.58 TRUE FALSE 1351.739372 1252.952736 1313.54743 1599.374957 1304.868152 1324.366425 1124.150003 1571.439889 1229.693891 844.6914045 1.600275988 1.483326017 1.555061912 1.893442917 1.544786824 1.567870133 1.330841058 1.860371588 1.4557907 1 9.72228056 -6.839993293 2.875765156 1.48168478 1.622729714 0.126491789 0.224443998 0.761852145 12.7660994 0.08379135 0.074378896 1.45E-07 6.839993293 0.141044934 ALIQTCLNSPDS(ph)PPRSDPTTDQR ddPTM_A459_MK2206_30min_R2 1 ALIQTCLNSPDSPPRSDPTTDQR 23 1 P11831 P11831 SRF Serum response factor 1 ALIQT(0.007)CLNS(0.289)PDS(0.464)PPRS(0.227)DPT(0.006)T(0.006)DQR 62.722 0.0038791 21124000 17139 24724 15808 24339 28541 24277 23551 23975 25599 18241 TRUE FALSE 18451.17502 23496.24211 16335.03083 22350.42584 27420.33693 25200.87825 20458.72541 27108.61482 27825.55475 17645.79766 1.045641312 1.33154888 0.925717904 1.266614651 1.553930146 1.428151831 1.159410631 1.53626463 1.57689413 1 14.10703703 -5.997729791 24.96408709 1.395833008 1.119383766 0.280631781 0.194700062 88.91966407 977760.4479 0.053123052 0.078243447 1.01E-06 5.997729791 -0.276449242 ALIQTCLNSPDSPPRS(ph)DPTTDQR ddPTM_A459_MK2206_30min_R1 2 ALIQTCLNSPDSPPRSDPTTDQR 23 1 P11831 P11831 SRF Serum response factor 1 ALIQT(0.001)CLNS(0.024)PDS(0.196)PPRS(0.746)DPT(0.017)T(0.017)DQR;ALIQTCLNS(0.001)PDS(0.145)PPRS(0.547)DPT(0.154)T(0.154)DQR 92.563 6.78E-05 34005000 2201.26 2278.46 2372.63 2400.83 2347.16 2448.46 2228.2 1899.09 2025.91 1457.28 TRUE FALSE 2014.031278 2130.13184 2211.582486 2585.742343 2253.667647 2587.089689 2079.560844 1882.486456 2236.510594 1637.818848 1.229703321 1.300590625 1.350321794 1.57877188 1.376017653 1.579594527 1.269713586 1.149386245 1.365542103 1 10.67756008 -8.724016305 0.717540484 1.007077484 1.392414106 0.422469963 0.127855713 0.976288584 1.053528963 0.135956014 0.05059081 1.89E-09 8.724016305 0.385336622 ALIQTCLNSPDSPPRS(ph)DPTTDQR ddPTM_A459_MK2206_30min_R2 3 ALIQTCLNSPDSPPRSDPTTDQR 23 1 P11831 P11831 SRF Serum response factor 1 ALIQTCLNSPDS(0.009)PPRS(0.882)DPT(0.055)T(0.055)DQR;ALIQT(0.006)CLNS(0.082)PDS(0.222)PPRS(0.577)DPT(0.056)T(0.056)DQR;ALIQTCLNSPDS(0.016)PPRS(0.412)DPT(0.285)T(0.285)DQR 99.313 2.98E-05 100795000 26123.9 46588.5 45075.9 47274.8 51068.9 50099.7 47392.2 32025.5 43234.4 46670 TRUE FALSE 28123.96587 44274.98284 46578.70801 43412.29762 49063.67839 52006.27919 41169.54721 36211.34281 46994.84996 45147.16172 0.622939844 0.980681424 1.031708445 0.96157313 1.086750009 1.151927989 0.911896687 0.802073518 1.0409259 1 15.46234767 -4.761860698 5.892650082 0.99621979 0.608376112 0.606136241 0.090398132 0.101873374 13.07698158 0.024407371 0.160076616 1.73E-05 4.761860698 -0.387843678 ALIVLAHSER ddPTM_A459_MK2206_30min_R1 2 ALIVLAHSER 10 0 B4DLR8;P15559-3;P15559-2;P15559;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 ; 151.83 0.00092321 33576000 10632 11889.9 11799.9 9848.6 11117.5 10816.3 10488.1 8975.7 8240.5 10085 FALSE TRUE 9727.692569 11115.86535 10998.95566 10607.14088 10674.66643 11428.70956 9788.457986 8897.226401 9097.129464 11334.40594 0.858244589 0.980718832 0.970404247 0.935835626 0.9417932 1.00832012 0.863605736 0.784975097 0.802611933 1 13.46842116 -7.419728318 6.37386021 0.841376593 0.950324813 0.276253948 0.065827756 0.24859869 13.04073634 0.026671181 0.017782598 3.80E-08 7.419728318 0.10894822 ALIVLAHSER ddPTM_A459_MK2206_30min_R2 1 ALIVLAHSER 10 0 B4DLR8;P15559-3;P15559-2;P15559;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 147.73 0.0011429 18404000 86163 113790 97572 133730 117490 114570 128090 114960 93214 102350 FALSE TRUE 92759.70553 108139.3541 100825.0018 122803.8312 112876.7523 118930.0416 111271.6291 129985.6667 101321.5852 99010.32788 0.936868986 1.092202767 1.018328127 1.240313348 1.140050282 1.201188241 1.123838609 1.312849573 1.023343599 1 16.5952914 -4.702991654 1.00717469 1.158819828 0.817135494 0.269393297 0.095881819 2.546428473 1.870601737 0.029433129 0.980464723 1.98E-05 4.702991654 -0.341684334 ALLETAS(ph)PR ddPTM_A459_MK2206_30min_R1 2 ALLETASPR 9 0 Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2 Q96BT3 CENPT Centromere protein T 1 ALLETAS(1)PR;ALLETAS(1)PR 130.41 0.0038104 4862800 5938.2 6296.8 5716 5356.7 6852 5417 5750.2 6265.6 4940.2 5124 TRUE FALSE 5433.124907 5886.877176 5328.013846 5769.273962 6579.070331 5723.705859 5366.61465 6210.82052 5453.751469 5758.799804 0.943447436 1.022240289 0.925195184 1.001818809 1.142437757 0.993906031 0.931898109 1.078492174 0.947029182 1 12.49155245 -5.988852307 24.60954109 1.019538301 0.968491901 0.121662981 0.061601696 403.5629069 890891.326 0.017438213 0.025840027 1.03E-06 5.988852307 -0.051046401 ALLETAS(ph)PR ddPTM_A459_MK2206_30min_R2 2 ALLETASPR 9 0 Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2 Q96BT3 CENPT Centromere protein T 1 ALLETAS(1)PR;ALLETAS(1)PR 135.43 0.0027274 23806000 167337 175921 162924 178721 181219 178009 197870 158428 143734 174462 TRUE FALSE 180148.4494 167185.019 168355.8048 164118.9226 174103.4315 184783.2572 171889.4313 179135.0836 156235.7235 168769.3192 1.067424163 0.990612629 0.997549825 0.972445249 1.031605936 1.094886547 1.018487437 1.06141972 0.925735342 1 17.36469313 -4.744208117 24.01312698 1.014206965 1.067424427 0.12460315 0.044346981 1545.347607 2153371.532 0.011206086 0.308384209 1.80E-05 4.744208117 0.053217462 ALLFVPR ddPTM_A459_MK2206_30min_R1 1 ALLFVPR 7 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 166.66 0.00057225 9763900 3361.9 3385.6 2793.6 3190.6 2822.5 3132.3 2894.1 2638.9 2600.7 2154 FALSE TRUE 3075.952751 3165.196825 2603.978215 3436.340565 2710.073848 3309.648119 2701.03987 2615.828376 2871.052072 2420.853782 1.270606583 1.307471293 1.075644566 1.419474646 1.119470275 1.367140859 1.115738542 1.080539599 1.185966742 1 11.24130023 -8.112417251 0.588361537 1.010540486 1.262562028 0.339064661 0.107799275 0.853495793 0.686052584 0.102539416 0.051626246 7.72E-09 8.112417251 0.252021542 ALLFVPR ddPTM_A459_MK2206_30min_R2 1 ALLFVPR 7 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 148.12 0.039304 3414500 11903 14588 11488 16583 14706 14210 15987 16043 9948.8 13228 FALSE TRUE 12814.30283 13863.58113 11871.00419 15228.11585 14128.56855 14750.77151 13887.8877 18139.87518 10814.12864 12796.37144 1.001401287 1.083399399 0.927685183 1.190033903 1.104107411 1.152730801 1.085298888 1.417579606 0.845093368 1 13.64344716 -5.768968816 24.99993448 1.131010358 1.012085696 0.102296134 0.141466011 331.8090422 1101706.149 0.03724076 0.056475527 1.70E-06 5.768968816 -0.118924662 ALLQSS(ph)ASR ddPTM_A459_MK2206_30min_R2 2 ALLQSSASR 9 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 ALLQS(0.083)S(0.917)ASR;ALLQS(0.022)S(0.978)ASR 158.47 0.00087461 25017000 101805 117260 97213 121476 111438 123616 126210 91588 95026 96683 TRUE FALSE 109599.2691 111437.0389 100454.0329 111551.0222 107062.3842 128320.2935 109638.4754 103558.8661 103291.1897 93528.24163 1.171830745 1.191480102 1.074050267 1.192698807 1.144706479 1.371995146 1.172249937 1.107247012 1.104385028 1 16.51311444 -8.362683934 1.4278757 1.00816812 1.187352341 0.392563162 0.0722384 0.429090312 1.806479283 0.071607227 0.0217769 4.34E-09 8.362683934 0.179184222 ALLS(ph)SGAVLYK ddPTM_A459_MK2206_30min_R2 1 ALLSSGAVLYK 11 0 E7EVQ6;Q14534 E7EVQ6 SQLE Squalene monooxygenase 1 ALLS(0.5)S(0.5)GAVLYK 77.597 0.03253 29201000 76269 102670 96978 87118 90985 59217 98430 84666 60300 83871 TRUE FALSE 82108.21328 97571.5571 100211.1981 80000.18072 87412.47174 61470.54443 85506.02276 95732.1369 65544.785 81134.29614 1.012003766 1.202593253 1.235127472 0.986021751 1.077380046 0.757639461 1.053882598 1.17992195 0.807855471 1 16.30802426 -5.779645749 24.55679896 0.985705272 1.155176648 0.268366271 0.127968938 254.9127715 343826.2695 0.036065366 0.053619481 1.66E-06 5.779645749 0.169471375 ALLT(ph)PVAIAAGR ddPTM_A459_MK2206_30min_R2 2 ALLTPVAIAAGR 12 0 P00390-5;P00390-4;P00390-2;P00390-3;P00390 P00390-5 GSR "Glutathione reductase, mitochondrial" 1 ALLT(1)PVAIAAGR;ALLT(1)PVAIAAGR 129.34 0.0054319 11219600 49483 59392 54312 60167 52815 64918 63386 47042 64825 54405 TRUE FALSE 53271.45653 56442.67964 56122.73497 55251.16364 50741.21773 67388.49998 55063.34206 53190.55092 70463.36132 52629.76931 1.012192476 1.072447787 1.06636863 1.049808205 0.964116286 1.280425525 1.046239472 1.010655217 1.338849899 1 15.68359145 -6.720700563 24.99999845 1.130338883 1.037968122 0.186901174 0.106133038 287.8962415 176670.9728 0.033866906 0.033866569 1.90E-07 6.720700563 -0.092370762 ALLVTAS(ph)QCQQPAENK ddPTM_A459_MK2206_30min_R2 1 ALLVTASQCQQPAENK 16 0 Q01518-2;Q01518;Q5T0R7;Q5T0R6;Q5T0R5;Q5T0R4;Q5T0R3;Q5T0R2;Q5T0R1;Q5T0R9 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein 1 ALLVT(0.006)AS(0.994)QCQQPAENK 83.292 0.044443 0 7957.9 9927.4 8407 12046 11631 7847.4 14989 8957.2 8534.2 11394 TRUE FALSE 8567.162943 9434.419752 8687.285184 11061.80327 11174.3085 8146.038306 13020.92629 10127.93679 9276.48929 11022.21471 0.777263296 0.855945924 0.788161491 1.003591706 1.013798841 0.739056398 1.181334844 0.918865859 0.841617545 1 13.42812652 -5.75570275 24.99895547 0.956160483 0.812005777 0.27571184 0.111152509 192.1828756 837478.6868 0.029931217 0.050096462 1.76E-06 5.75570275 -0.144154706 ALMGS(ph)PQLVAAVVR ddPTM_A459_MK2206_30min_R2 2 ALMGSPQLVAAVVR 14 0 P14923;C9JTX4;C9J826;C9JK18;C9JKY1 P14923 JUP Junction plakoglobin 1 ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR 133.9 0.00068891 18124600 54700 52179 52854 62086 40625 56077 54247 43651 50126 55193 TRUE FALSE 58887.87406 49587.86674 54616.12598 57013.3752 39029.85838 58211.04953 47124.30374 49356.33558 54485.86887 53392.05693 1.102933235 0.928749885 1.022926052 1.067825038 0.731004959 1.090256732 0.882608883 0.924413451 1.020486417 1 15.70433751 -4.753580403 24.67903193 0.960120292 1.102933541 0.150933633 0.099234959 461.8338205 1450127.724 0.023520465 0.247373071 1.76E-05 4.753580403 0.14281325 ALNHSVEDIEPDLLT(ph)PR ddPTM_A459_MK2206_30min_R1 1 ALNHSVEDIEPDLLTPR 17 0 I3L2K5;Q8IWR0 I3L2K5 ZC3H7A Zinc finger CCCH domain-containing protein 7A 1 ALNHSVEDIEPDLLT(1)PR 136.67 0.00069603 4864400 2120.6 1689.1 1831.4 1718.8 2266 1890.5 1995.3 2300.3 1761.4 1674.5 TRUE FALSE 1940.231834 1579.139283 1707.089671 1851.182274 2175.740422 1997.538476 1862.197178 2280.18872 1944.503833 1881.949702 1.030969017 0.839097496 0.907085704 0.983651302 1.156109762 1.061419694 0.989504223 1.211609809 1.033239003 1 10.87801235 -6.027553071 4.839393983 1.080848897 0.919849402 0.435747715 0.077104257 0.165434868 10.00226983 0.022112678 0.030467973 9.39E-07 6.027553071 -0.160999495 ALNHSVEDIEPDLLT(ph)PR ddPTM_A459_MK2206_30min_R2 2 ALNHSVEDIEPDLLTPR 17 0 I3L2K5;Q8IWR0 I3L2K5 ZC3H7A Zinc finger CCCH domain-containing protein 7A 1 ALNHSVEDIEPDLLT(1)PR;ALNHSVEDIEPDLLT(1)PR 190.63 1.03E-07 9076800 24057 29561 31745 34889 28552 30130 32311 26992 31444 28362 TRUE FALSE 25898.82242 28093.04373 32803.36246 32038.4571 27430.90502 31276.61826 28068.52689 30519.94708 34178.94228 27436.55026 0.943953309 1.023927697 1.195608126 1.167729062 0.999794244 1.139961765 1.023034114 1.112382817 1.24574489 1 14.74381148 -5.013398505 5.277546767 1.110876916 0.958902762 0.314736705 0.078809648 0.180772647 16.38535926 0.019834162 0.066989702 9.70E-06 5.013398505 -0.151974155 ALPAAHIPAPPHEGS(ph)PR ddPTM_A459_MK2206_30min_R2 1 ALPAAHIPAPPHEGSPR 17 0 P17029;E9PC66 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 1 ALPAAHIPAPPHEGS(1)PR 84.753 0.0080048 3324500 3922.9 5847.4 4733.4 6863.4 5443.5 8034 8176.1 3023 6010.4 4943 TRUE FALSE 4223.24024 5557.026619 4891.209194 6302.638265 5229.760839 8339.7395 7102.568249 3418.11648 6533.173728 4781.710315 0.883207046 1.162142048 1.022899522 1.318071955 1.093700892 1.744091329 1.485361467 0.714831358 1.366283881 1 12.22331102 -5.754110261 24.7895559 1.258541991 1.036688715 0.123467658 0.270458962 348.2478785 1177877.292 0.076310355 0.128770547 1.76E-06 5.754110261 -0.221853276 ALPASET(ph)PK ddPTM_A459_MK2206_30min_R1 2 ALPASETPK 9 0 O76021;J3QSV6;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 ALPAS(0.031)ET(0.969)PK;ALPAS(0.001)ET(0.999)PK 126.03 0.011467 115148000 23022 25409 23841 18397.2 12296.4 10775.4 16110.2 15247.2 21212.8 21008 TRUE FALSE 21063.85801 23754.86948 22222.73934 19814.15553 11806.60835 11385.49384 15035.51795 15113.89534 23417.94647 23610.62964 0.892134531 1.006109106 0.941217565 0.839204876 0.500054786 0.482218984 0.636811393 0.640130974 0.991839135 1 14.5271489 -6.022307167 5.508246011 0.674267751 0.944842397 0.276407786 0.168396665 0.204270781 19.40727375 0.050132352 0.068816259 9.50E-07 6.022307167 0.270574646 ALPDSQQVPS(ph)SPASK ddPTM_A459_MK2206_30min_R1 1 ALPDSQQVPSSPASK 15 0 O14924-5;O14924-4;O14924;O14924-7;O14924-6;O14924-2;O14924-3 O14924-5 RGS12 Regulator of G-protein signaling 12 1 ALPDSQQVPS(0.498)S(0.498)PAS(0.004)K 197.29 2.88E-05 8132900 4308.9 4415.1 4582.2 3739.5 4088.7 3317 4313.6 3897.8 3460.6 2897.8 TRUE FALSE 3942.405428 4127.676188 4271.173031 4027.516938 3925.838421 3504.805674 4025.847615 3863.721946 3820.341754 3256.801341 1.210514556 1.267401894 1.311462562 1.236648022 1.20542766 1.076149665 1.236135457 1.186354813 1.173034936 1 11.66924001 -14.52287874 0.110736408 0.301169299 1.334832651 0.637774328 0.052146081 112.6618206 0.824868408 17.73262186 0.686949067 3.00E-15 14.52287874 1.033663352 ALPDSQQVPS(ph)SPASK ddPTM_A459_MK2206_30min_R2 1 ALPDSQQVPSSPASK 15 0 O14924-5;O14924-4;O14924;O14924-7;O14924-6;O14924-2;O14924-3 O14924-5 RGS12 Regulator of G-protein signaling 12 1 ALPDSQQVPS(0.901)S(0.099)PASK 184.01 2.10E-05 15323000 41239 46916 40412 44844 42791 36862 48954 35598 38672 44519 TRUE FALSE 44396.28955 44586.21966 41759.31591 41180.10175 41110.81033 38264.80924 42526.281 40250.78083 42035.62066 43066.34868 1.030881208 1.035291383 0.969650718 0.956201373 0.954592428 0.888508323 0.987459636 0.934622555 0.97606651 1 15.39427339 -5.341536452 3.071150365 0.95270714 1.035131194 0.51125614 0.029179276 0.185025118 3.351908591 0.007654636 0.019726094 4.55E-06 5.341536452 0.082424054 ALPDSQQVPSS(ph)PASK ddPTM_A459_MK2206_30min_R1 1 ALPDSQQVPSSPASK 15 0 O14924-5;O14924-4;O14924;O14924-7;O14924-6;O14924-2;O14924-3 O14924-5 RGS12 Regulator of G-protein signaling 12 1 ALPDSQQVPS(0.198)S(0.75)PAS(0.052)K 184.01 2.10E-05 9630800 3280.3 3204.8 3162.4 2497.6 2895.3 2664 2820.9 2360.6 2421.3 2413.5 TRUE FALSE 3001.293259 2996.166938 2947.745099 2689.965585 2779.97407 2814.833378 2632.722908 2339.961523 2673.0028 2712.502601 1.1064665 1.104576614 1.086725262 0.991691431 1.02487425 1.037725596 0.97058816 0.862657799 0.985437875 1 11.40540881 -6.043929726 0.607587584 0.946562416 1.130874715 0.613907411 0.043463607 0.741472057 0.523446598 0.030276102 0.079311292 9.04E-07 6.043929726 0.184312299 ALPDSQQVPSS(ph)PASK ddPTM_A459_MK2206_30min_R2 2 ALPDSQQVPSSPASK 15 0 O14924-5;O14924-4;O14924;O14924-7;O14924-6;O14924-2;O14924-3 O14924-5 RGS12 Regulator of G-protein signaling 12 1 ALPDSQQVPS(0.191)S(0.809)PAS(0.001)K;ALPDSQQVPS(0.017)S(0.983)PASK 238.12 5.70E-20 17948400 83125 99625 92944 92860 90171 81253 97257 76033 73575 84853 TRUE FALSE 89489.11391 94677.76737 96042.70657 85273.04096 86630.43347 84345.13985 84487.03907 85970.77416 79974.42051 82084.25356 1.090210485 1.153421798 1.170050313 1.038847736 1.055384312 1.027543484 1.029272186 1.047347944 0.974296738 1 16.32481787 -5.819596921 6.821471396 1.027641096 1.139251944 0.761635817 0.029009096 0.096144671 8.876085873 0.008157552 0.01227437 1.51E-06 5.819596921 0.111610847 ALPGQLKPFETLLSQNQGGK ddPTM_A459_MK2206_30min_R1 2 ALPGQLKPFETLLSQNQGGK 20 1 P09211;A0A087X243 P09211 GSTP1 Glutathione S-transferase P 0 ; 137.73 0.00025713 26935000 4418.7 5566.3 4776.4 5208.5 4335.7 4134.9 3832 4489.5 4897.9 4073.3 FALSE TRUE 4042.866361 5203.932858 4452.191276 5609.659572 4162.999888 4369.014465 3576.374272 4450.248775 5407.054232 4577.931156 0.88312083 1.136743363 0.972533471 1.225370016 0.909362711 0.954364388 0.781220632 0.972109152 1.18111305 1 12.16048005 ALPGQLKPFETLLSQNQGGK ddPTM_A459_MK2206_30min_R2 1 ALPGQLKPFETLLSQNQGGK 20 1 P09211;A0A087X243 P09211 GSTP1 Glutathione S-transferase P 0 137.91 0.00025267 1870000 11276 13240 11563 13022 12730 11114 14937 11465 8413.7 11089 FALSE TRUE 12139.29923 12582.52085 11948.50465 11958.06094 12230.15624 11536.95106 12975.75396 12963.51487 9145.508418 10727.16684 1.13164076 1.172958437 1.113854649 1.114745499 1.140110564 1.075489105 1.209616123 1.208475179 0.85255581 1 13.38898147 -8.259924937 24.99998191 0.926277895 1.144248179 0.742193705 0.051759365 62.46208987 1031152.604 0.039035057 0.012967609 5.50E-09 8.259924937 0.217970284 ALPLS(ph)PR ddPTM_A459_MK2206_30min_R1 3 ALPLSPR 7 0 J3KTI7;J3QR52;J3QLN7;Q99741 J3KTI7 CDC6 Cell division control protein 6 homolog 1 ALPLS(1)PR;ALPLS(1)PR;ALPLS(1)PR 86.67 0.034599 79372000 14902.7 15205.1 15931 12978.2 15450.2 15314.5 14880.8 13328.7 12333.9 11350.3 TRUE FALSE 13635.14711 14215.24523 14849.64811 13977.78321 14834.78582 16181.59376 13888.12898 13212.16858 13616.05304 12756.46085 1.068881664 1.114356512 1.1640884 1.095741473 1.162923321 1.268501816 1.088713331 1.03572368 1.067384849 1 13.6389405 -7.517826315 20.95892494 1.043375945 1.146575171 0.474351206 0.052549907 26.53358348 110083.7699 0.02512458 0.015131551 3.04E-08 7.517826315 0.103199225 ALPNNT(ph)SSSPQPK ddPTM_A459_MK2206_30min_R2 1 ALPNNTSSSPQPK 13 0 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 ALPNNT(0.379)S(0.379)S(0.166)S(0.076)PQPK 110.98 0.012649 7677500 48033 50046 50783 55812 56655 45470 62744 49601 43497 58515 TRUE FALSE 51710.44341 47560.78841 52476.07987 51251.98107 54430.44003 47200.39271 54505.63743 56084.02101 47280.29044 56605.66034 0.913520717 0.840212589 0.92704651 0.905421485 0.961572389 0.83384581 0.962900832 0.990784679 0.83525729 1 15.7886587 -14.52287874 0.116601761 1.272053234 0.86638481 0.191306037 0.054081174 257.7162839 1.958025594 16.86045151 0.554166537 3.00E-15 14.52287874 -0.405668425 ALPNNTS(ph)SSPQPK ddPTM_A459_MK2206_30min_R1 1 ALPNNTSSSPQPK 13 0 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 ALPNNT(0.122)S(0.535)S(0.208)S(0.136)PQPK 160.18 0.00036405 29777000 9881.5 11355 11272 8632.2 9459.7 8565.6 9862.4 9121.7 9148 8569.8 TRUE FALSE 9041.026535 10615.78744 10506.88805 9297.05354 9082.900118 9050.57687 9204.497291 9041.949939 10098.96734 9631.491523 0.938694336 1.102195585 1.090888989 0.965276616 0.943041905 0.939685909 0.955666863 0.938790209 1.048536181 1 13.23354351 -5.780524728 24.46065986 0.964590716 1.049753216 0.292324893 0.051872404 193.5075228 248007.5303 0.01441636 0.021423863 1.66E-06 5.780524728 0.0851625 ALPNNTSS(ph)SPQPK ddPTM_A459_MK2206_30min_R1 1 ALPNNTSSSPQPK 13 0 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 ALPNNT(0.091)S(0.249)S(0.33)S(0.33)PQPK 170.26 0.00023238 32758000 8730.4 9934.5 9798.4 7731.1 7445.9 7223 8689.2 8063.7 6877.4 6235 TRUE FALSE 7987.833635 9287.762244 9133.311908 8326.550662 7149.314036 7631.960018 8109.559322 7993.199921 7592.330341 7007.438872 1.139907715 1.325414665 1.303373754 1.188244495 1.020246365 1.089122596 1.157278639 1.140673514 1.083467224 1 12.77467154 -6.018788787 5.416031479 1.093275262 1.261549217 0.600841473 0.064179944 0.123514206 11.38510433 0.018941775 0.026158727 9.58E-07 6.018788787 0.168273955 ALPNNTSS(ph)SPQPK ddPTM_A459_MK2206_30min_R2 1 ALPNNTSSSPQPK 13 0 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 ALPNNT(0.031)S(0.124)S(0.423)S(0.423)PQPK 175.6 9.89E-05 7374300 34771 44470 33578 43796 44329 33013 46069 33471 34972 41530 TRUE FALSE 37433.09449 42261.68447 34697.47376 40217.7267 42588.42072 34269.33285 40020.08496 37845.77462 38013.80135 40174.8795 0.931753747 1.05194303 0.863660929 1.001066517 1.06007588 0.853003998 0.996146982 0.94202584 0.946208223 1 15.29400608 -6.745910279 24.99971535 0.946895453 0.980120553 0.064908519 0.064790324 788.9739365 1270136.778 0.020836046 0.020765111 1.80E-07 6.745910279 0.0332251 ALPNNTSSS(ph)PQPK ddPTM_A459_MK2206_30min_R1 2 ALPNNTSSSPQPK 13 0 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 ALPNNT(0.006)S(0.022)S(0.075)S(0.896)PQPK;ALPNNT(0.009)S(0.033)S(0.127)S(0.831)PQPK 201.09 0.00010139 49782000 11790.4 13000.3 12577.8 10022.8 10569.4 9763.7 10917.8 10112.5 9328 9362.5 TRUE FALSE 10787.56457 12153.97811 11724.05398 10794.75779 10148.39842 10316.51226 10189.49348 10024.08748 10297.67898 10522.39718 1.025200283 1.155057911 1.114199909 1.025883894 0.964456886 0.980433648 0.968362371 0.952642949 0.978643821 1 13.36117579 -5.95479327 3.203161479 0.972330892 1.10364567 0.745748092 0.032293374 0.111497345 2.352320695 0.00937103 0.014238461 1.11E-06 5.95479327 0.131314778 ALPNNTSSS(ph)PQPK ddPTM_A459_MK2206_30min_R2 4 ALPNNTSSSPQPK 13 0 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 ALPNNTSSS(1)PQPK;ALPNNTS(0.022)S(0.085)S(0.893)PQPK;ALPNNT(0.05)S(0.05)S(0.05)S(0.849)PQPK;ALPNNT(0.145)S(0.145)S(0.078)S(0.633)PQPK 191.01 0.00015217 164113000 269754 309382 292930 316412 306400 253358 348511 277390 258895 328086 TRUE FALSE 290406.5736 294018.5398 302696.14 290560.1274 294369.1965 262999.7162 302751.0871 313645.8254 281413.2191 317380.5807 0.915010531 0.926391083 0.953732391 0.915494347 0.927495929 0.828657241 0.953905517 0.988232565 0.886674347 1 18.27585433 -10.83537079 3.170047969 1.000500002 0.922961498 0.249691059 0.040652235 17680808.81 24028316.97 85089.57986 0.01036002 1.46E-11 10.83537079 -0.077538504 ALPQT(ph)PRPR ddPTM_A459_MK2206_30min_R1 1 ALPQTPRPR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ALPQT(1)PRPR 98.182 0.027585 350950000 1175.6 1039.8 924.5 937.59 1156.4 1125.3 880.66 920.3 774.57 734.17 TRUE FALSE 1075.609047 972.108831 861.7475158 1009.803344 1110.338139 1189.013514 821.9127783 912.2539141 855.0893233 825.1245223 1.303571785 1.178135911 1.044384808 1.223819335 1.345661302 1.441011001 0.996107564 1.105595446 1.03631549 1 9.688468047 -7.293974896 24.97868163 1.043304214 1.245534311 0.526481599 0.102524126 653.8803427 502004.6375 0.047774189 0.032212327 5.08E-08 7.293974896 0.202230098 ALPQTPRPR ddPTM_A459_MK2206_30min_R1 1 ALPQTPRPR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 113.66 0.0077323 0 263.52 136.87 366.04 212.72 173.98 172.35 206.08 273.69 227.21 228.15 FALSE TRUE 241.1062402 127.9597381 341.1942246 229.1037313 167.0500082 182.1083081 192.3327792 271.2971572 250.8292926 256.4149444 0.940297145 0.499033855 1.330633148 0.893488216 0.651483121 0.710209416 0.750084125 1.058039569 0.978216356 1 8.002336538 -7.766772342 24.99985152 1.013596008 0.823482105 0.145254472 0.207901159 275.4583524 1291262.357 0.112214341 0.056392837 1.71E-08 7.766772342 -0.190113902 ALPQTPRPR ddPTM_A459_MK2206_30min_R2 2 ALPQTPRPR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 ; 114.89 0.0235 7382700 8706.3 12589.7 10342 13403.9 11565.8 12227.9 13453.9 9679.9 11147.8 8949.5 FALSE TRUE 9372.861022 11964.51381 10686.79712 12308.75849 11111.66858 12693.2413 11687.38677 10945.09617 12117.41549 8657.478548 1.082631735 1.38198596 1.234400647 1.421748656 1.283476305 1.46615914 1.349975828 1.264236013 1.399647187 1 13.07973119 -10.71138885 4.209488946 0.999889383 1.325140205 0.453597717 0.105407921 71535128.26 20.16438612 86508.55776 0.024136218 1.94E-11 10.71138885 0.325250822 ALPS(ph)EDEEGQDDKDFYLR ddPTM_A459_MK2206_30min_R1 1 ALPSEDEEGQDDKDFYLR 18 1 Q8NF91;Q8NF91-4;A0A0C4DG40;E7ENN3;Q8NF91-2;A0A5F9ZHE1;A0A5F9ZH87;H0Y325;F8WAI0;Q5JV20;Q8NF91-9;H0Y326;Q8NF91-3;Q8NF91-11;Q8NF91-8;A0A5F9ZHB2;A0A5F9ZH86 Q8NF91 SYNE1 Nesprin-1 1 ALPS(1)EDEEGQDDKDFYLR 115.74 0.00058084 13963000 2156.6 2153.1 2099.8 2212.8 2219.1 1789.7 1942.8 1990.6 2319.7 1747.5 TRUE FALSE 1973.169845 2012.932799 1957.271426 2383.230239 2130.708548 1891.031267 1813.199357 1973.196394 2560.841116 1963.993493 1.004672293 1.024918263 0.996577348 1.213461372 1.084885747 0.962850068 0.923220654 1.00468581 1.303894909 1 10.93957443 -8.156472707 20.61735377 1.153001489 1.028387916 0.198159184 0.100563173 11.69825341 2282.623549 0.069062593 0.02610314 6.97E-09 8.156472707 -0.124613573 ALPS(ph)EDEEGQDDKDFYLR ddPTM_A459_MK2206_30min_R2 2 ALPSEDEEGQDDKDFYLR 18 1 Q8NF91;Q8NF91-4;A0A0C4DG40;E7ENN3;Q8NF91-2;A0A5F9ZHE1;A0A5F9ZH87;H0Y325;F8WAI0;Q5JV20;Q8NF91-9;H0Y326;Q8NF91-3;Q8NF91-11;Q8NF91-8;A0A5F9ZHB2;A0A5F9ZH86 Q8NF91 SYNE1 Nesprin-1 1 ALPS(1)EDEEGQDDKDFYLR;ALPS(1)EDEEGQDDKDFYLR 109.77 0.00078358 15605400 38324 34875 38441 29892 37636 37520 46972 32754 37003 41125 TRUE FALSE 41258.11491 33143.15821 39722.60375 27449.72798 36158.22153 38947.84989 40804.51998 37035.06026 40221.45405 39783.09462 1.03707656 0.833096533 0.998479483 0.689984735 0.908884085 0.979005034 1.025674859 0.93092457 1.011018736 1 15.27986788 -6.722165747 4.697338234 0.987874834 0.8831565 0.217391858 0.090785877 0.303409406 15.05384715 0.030493222 0.029518485 1.90E-07 6.722165747 -0.104718333 ALPSGSPAQGPS(ph)GNRPQSTGLSCQGR ddPTM_A459_MK2206_30min_R2 1 ALPSGSPAQGPSGNRPQSTGLSCQGR 26 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 ALPS(0.001)GS(0.002)PAQGPS(0.512)GNRPQS(0.108)T(0.371)GLS(0.006)CQGR 54.306 0.0066169 3887700 1483.1 3587.6 2771.2 1503.5 3495.5 3718.9 4041.2 1217.7 3049.4 3287.3 TRUE FALSE 1596.647276 3409.445001 2863.590425 1380.659241 3358.249107 3860.425345 3510.585586 1376.857571 3314.6313 3180.03567 0.502084707 1.07214049 0.900490033 0.434164702 1.056041332 1.213956617 1.103945348 0.432969222 1.042325195 1 11.63482723 ALPSLNTGS(ph)SSPR ddPTM_A459_MK2206_30min_R2 1 ALPSLNTGSSSPR 13 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 ALPSLNT(0.004)GS(0.332)S(0.332)S(0.332)PR 107.93 0.0064507 10071000 30718 33296 32902 25298 32228 32440 30174 25983 36529 29985 TRUE FALSE 33069.7937 31642.56906 33998.93626 23231.07248 30962.56679 33674.52693 26212.11755 29379.06731 39706.22639 29006.59191 1.140078566 1.090875107 1.172110683 0.800889417 1.067432082 1.160926697 0.903660714 1.012841061 1.368869067 1 14.82409318 -10.22054635 6.578632456 0.999999934 1.069464293 0.021535645 0.147249204 4.11E-10 1.60E-10 0.141032756 0.034205467 6.02E-11 10.22054635 0.069464359 ALPSLNTGSS(ph)SPR ddPTM_A459_MK2206_30min_R2 2 ALPSLNTGSSSPR 13 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 ALPSLNTGS(0.007)S(0.718)S(0.275)PR;ALPSLNT(0.002)GS(0.158)S(0.563)S(0.277)PR 158.31 0.00036465 327550000 72471 93943 82320 93411 90661 92287 101762 72968 81212 80568 TRUE FALSE 78019.43548 89277.92723 85064.50771 85779.02249 87101.19361 95799.04645 88400.52716 82505.16814 88275.67296 77939.07276 1.001031097 1.145483569 1.091423143 1.100590749 1.117554912 1.229153017 1.134226057 1.058585447 1.132624111 1 16.25005915 -4.752919589 24.96719534 1.117514261 1.001030875 0.253425549 0.056570708 439.7656882 1288631.648 0.013921427 0.157860068 1.77E-05 4.752919589 -0.116483386 ALPSLNTGSSS(ph)PR ddPTM_A459_MK2206_30min_R1 6 ALPSLNTGSSSPR 13 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 ALPSLNTGSS(0.003)S(0.997)PR;ALPSLNTGS(0.001)S(0.004)S(0.994)PR;ALPSLNTGSS(0.013)S(0.986)PR;ALPSLNTGSS(0.01)S(0.99)PR;ALPSLNTGSS(0.003)S(0.997)PR;ALPSLNTGSS(0.002)S(0.998)PR 244.71 2.22E-18 658879000 25114.5 25609.8 25135.7 22316.6 25316.6 23456.5 27655.4 23995.3 20454.7 19644.6 TRUE FALSE 22978.37989 23942.59737 23429.55872 24035.4284 24308.18621 24784.58676 25810.55873 23785.51162 22581.03926 22078.32136 1.04076662 1.08443921 1.061201997 1.088643833 1.100997935 1.122575687 1.169045341 1.077324278 1.022769752 1 14.43034287 -3.474689095 0.912195949 1.090385098 0.612513454 0.035200738 0.045806893 53.92184363 5.34416758 0.015596569 43.63738716 0.000335205 3.474689095 -0.477871644 ALPSLNTGSSS(ph)PR ddPTM_A459_MK2206_30min_R2 2 ALPSLNTGSSSPR 13 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 ALPSLNT(0.001)GS(0.022)S(0.23)S(0.747)PR;ALPSLNTGS(0.001)S(0.048)S(0.951)PR 158.65 0.00036454 336840000 79568 97970 89764 88522 95677 100052 94364 74217 89359 84263 TRUE FALSE 85659.78726 93104.95226 92756.68696 81289.46943 91920.24024 103859.549 81973.89345 83917.41673 97131.2843 81513.50521 1.050866197 1.14220278 1.137930294 0.99725155 1.127668845 1.274139159 1.005648 1.02949096 1.191597442 1 16.31475149 -10.74131426 5.021302252 0.999987454 1.105432861 0.128087382 0.083182695 1.17E-05 1.83E-06 0.080985521 0.019639537 1.81E-11 10.74131426 0.105445407 ALPTSKPEGSLHS(ph)SPVGPSSSK ddPTM_A459_MK2206_30min_R1 2 ALPTSKPEGSLHSSPVGPSSSK 22 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 ALPTSKPEGSLHS(0.779)S(0.143)PVGPS(0.027)S(0.041)S(0.009)K;ALPTSKPEGSLHS(0.736)S(0.262)PVGPS(0.001)SSK 125.19 1.73E-05 85727000 15639.7 8003.6 10729.8 7569.7 19515.8 17095.9 17785.3 15058.8 9597.8 8913.9 TRUE FALSE 14309.46139 7482.564185 10001.49107 8152.719606 18738.44436 18063.85508 16598.87509 14927.1425 10595.52566 10018.22123 1.428343521 0.746895483 0.998330027 0.813789137 1.870436271 1.803100039 1.656868491 1.489999288 1.057625442 1 13.29033876 -6.249917098 24.98454863 1.529202827 0.979092844 0.353236522 0.315463719 753.3777784 1633599.851 0.093928432 0.120196897 5.62E-07 6.249917098 -0.550109983 ALPTSKPEGSLHS(ph)SPVGPSSSK ddPTM_A459_MK2206_30min_R2 2 ALPTSKPEGSLHSSPVGPSSSK 22 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 ALPTSKPEGSLHS(0.497)S(0.497)PVGPS(0.003)S(0.001)S(0.001)K;ALPTSKPEGSLHS(0.684)S(0.258)PVGPS(0.021)S(0.03)S(0.007)K 107.98 3.11E-05 91377000 353425 700647 488476 800930 769008 795812 980556 727850 812747 697341 TRUE FALSE 380483.4897 665853.8888 504761.546 735491.457 738812.882 826097.1833 851807.8193 822982.4941 883438.2649 674586.8203 0.564024494 0.9870544 0.748252902 1.090284356 1.095208 1.224597277 1.262710438 1.219980096 1.309599059 1 19.36364461 -5.613636396 0.791894633 1.229147665 0.631881115 0.693199615 0.125009571 0.550513198 0.554322916 0.053385677 0.238279999 2.43E-06 5.613636396 -0.59726655 ALQAS(ph)ALK ddPTM_A459_MK2206_30min_R2 2 ALQASALK 8 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BR68 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 ALQAS(1)ALK;ALQAS(1)ALK 90.149 0.028672 27439000 180055 174604 130617 193754 156334 107173 223600 167328 113648 148278 TRUE FALSE 193840.1492 165933.4193 134971.7056 177923.6784 150195.5416 111251.5436 194241.0514 189198.3441 123532.8976 143439.701 1.351370282 1.156816544 0.940964772 1.240407482 1.04709882 0.775597989 1.3541652 1.31900961 0.861218315 1 17.13008486 -4.82714466 3.719794888 1.082194365 1.367258746 0.181240348 0.180703784 0.442265732 10.41791845 0.046073646 0.317890659 1.49E-05 4.82714466 0.285064381 ALQEGEGDLSIS(ph)ADR ddPTM_A459_MK2206_30min_R1 2 ALQEGEGDLSISADR 15 0 P49589-3;B4DKY1;P49589-2;P49589 P49589-3 CARS "Cysteine--tRNA ligase, cytoplasmic" 1 ALQEGEGDLSIS(1)ADR;ALQEGEGDLSIS(1)ADR 224.67 5.10E-10 13663000 3527.6 3510.1 3448.5 2331.6 3252.5 2816 3971.7 2762.8 3419.4 4339.8 TRUE FALSE 3227.559096 3281.591852 3214.425428 2511.180236 3122.946038 2975.439486 3706.75514 2738.645131 3774.858866 4877.447188 0.661731224 0.672809305 0.65903849 0.514855444 0.640282902 0.610040329 0.759978529 0.561491499 0.773941515 1 12.25191054 -8.574118266 4.138168275 0.999852519 0.637266038 0.764369655 0.062530727 0.117794267 6.170405206 0.059793672 0.015644401 2.67E-09 8.574118266 -0.362586481 ALQEGEGDLSIS(ph)ADR ddPTM_A459_MK2206_30min_R2 4 ALQEGEGDLSISADR 15 0 P49589-3;B4DKY1;P49589-2;P49589 P49589-3 CARS "Cysteine--tRNA ligase, cytoplasmic" 1 ALQEGEGDLSIS(1)ADR;ALQEGEGDLS(0.021)IS(0.979)ADR;ALQEGEGDLSIS(1)ADR;ALQEGEGDLSIS(1)ADR 184.22 2.11E-05 18309700 88914 87736 85251 102963 88664 84755.3 89091 73866.8 77337 77696.8 TRUE FALSE 95721.3242 83379.15782 88093.22579 94550.59354 85182.60586 87980.72233 77393.24468 83521.44438 84063.63247 75161.55978 1.273540949 1.109332458 1.172051592 1.25796476 1.133326745 1.17055477 1.029691839 1.111225534 1.118439169 1 16.19770739 -7.15044459 5.437759565 1.074472072 1.184304321 0.517227585 0.057169037 0.210251435 8.754005976 0.021748485 0.016750744 7.07E-08 7.15044459 0.109832249 ALQEGEGDLSIS(ph)ADRLSEK ddPTM_A459_MK2206_30min_R1 1 ALQEGEGDLSISADRLSEK 19 1 P49589-3;B4DKY1;P49589-2;P49589 P49589-3 CARS "Cysteine--tRNA ligase, cytoplasmic" 1 ALQEGEGDLS(0.019)IS(0.975)ADRLS(0.006)EK 103.71 0.000536 17795000 2357.7 2864.9 2967.9 2643.7 2517.2 2363.1 2278.6 2216.1 2468.2 2087.3 TRUE FALSE 2157.165234 2678.394489 2766.447217 2847.318232 2416.934594 2496.89668 2126.598752 2196.724871 2724.778223 2345.890482 0.9195507 1.14173893 1.179273814 1.213747297 1.030284496 1.064370523 0.9065209 0.936414077 1.161511265 1 11.19591995 -6.587544731 2.773166644 1.001453833 1.119744582 0.173981078 0.098597518 0.42641294 6.659214475 0.035702861 0.036616467 2.58E-07 6.587544731 0.118290749 ALQEGEGDLSIS(ph)ADRLSEK ddPTM_A459_MK2206_30min_R2 1 ALQEGEGDLSISADRLSEK 19 1 P49589-3;B4DKY1;P49589-2;P49589 P49589-3 CARS "Cysteine--tRNA ligase, cytoplasmic" 1 ALQEGEGDLS(0.068)IS(0.868)ADRLS(0.064)EK 67.552 0.011329 14607000 32586 47552 43780 51904 45198 37913 49775 34422 35987 44020 TRUE FALSE 35080.80921 45190.63683 45239.60335 47663.27717 43423.29942 39355.80578 43239.48271 38921.07359 39117.08421 42583.63101 0.823809722 1.061220844 1.062370735 1.119286356 1.019718103 0.924200329 1.015401498 0.913991425 0.918594382 1 15.37801135 -6.686221614 7.187355796 0.953013413 1.028485759 0.130026001 0.078762293 0.422123125 33.66559202 0.026552845 0.026458841 2.06E-07 6.686221614 0.075472346 ALQEGEGDLSISADRLS(ph)EK ddPTM_A459_MK2206_30min_R2 1 ALQEGEGDLSISADRLSEK 19 1 P49589-3;B4DKY1;P49589-2;P49589 P49589-3 CARS "Cysteine--tRNA ligase, cytoplasmic" 1 ALQEGEGDLS(0.009)IS(0.103)ADRLS(0.888)EK 82.774 0.0027143 13454000 20833 29004 22240 29858 30653 24495 24890 17709 22253 23617 TRUE FALSE 22427.9905 27563.70354 22981.4705 27418.50589 29449.4092 25427.17439 21621.9131 20023.6271 24188.52572 22846.37922 0.981686869 1.206480172 1.005913028 1.200124782 1.289018663 1.112962984 0.946404368 0.876446412 1.058746573 1 14.47967792 -7.21231586 5.312604765 0.959905857 1.14188474 0.404552891 0.09606893 0.196396753 13.07090608 0.038033743 0.028770506 6.13E-08 7.21231586 0.181978883 ALQESATGQPEPTS(ph)SPDNKPFK ddPTM_A459_MK2206_30min_R2 3 ALQESATGQPEPTSSPDNKPFK 22 1 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 ALQES(0.001)AT(0.002)GQPEPT(0.246)S(0.375)S(0.375)PDNKPFK;ALQESATGQPEPT(0.036)S(0.482)S(0.482)PDNKPFK;ALQESAT(0.001)GQPEPT(0.218)S(0.619)S(0.162)PDNKPFK 87.419 0.0002965 33923100 149060 146743 165522 145049 138827 125745 158895 122423 118433 158979 TRUE FALSE 160472.1482 139455.956 171040.4209 133198.0327 133375.9544 130530.3141 138031.8956 138424.1064 128734.0883 153791.5282 1.043439454 0.906785683 1.112157625 0.866094734 0.867251636 0.848748404 0.897526003 0.900076279 0.837068789 1 17.23061651 -5.790392609 24.99820478 0.881829115 1.009393467 0.473618134 0.063521327 165.7413971 143100.3898 0.01668223 0.024748301 1.62E-06 5.790392609 0.127564352 ALQEVGSGGTLGLSS(ph)PKS ddPTM_A459_MK2206_30min_R1 2 ALQEVGSGGTLGLSSPKS 18 1 A0A0M3HER3 A0A0M3HER3 1 ALQEVGSGGTLGLS(0.002)S(0.998)PKS;ALQEVGSGGTLGLS(0.012)S(0.978)PKS(0.01) 228.32 1.82E-18 22859000 8662.2 9203.2 10089.7 8391 6670.6 5946.7 6818.6 8666.7 7482 6463 TRUE FALSE 7925.434403 8604.070007 9404.839276 9037.276274 6404.895877 6283.397015 6363.743635 8590.927956 8259.780675 7263.685233 1.091103778 1.184532332 1.294775169 1.244172343 0.88176947 0.86504258 0.876103993 1.18272305 1.137133619 1 12.82648597 -6.249904763 24.8522166 0.987609387 1.208789896 0.471018398 0.110599449 685.5272547 1477020.847 0.037000969 0.047340532 5.62E-07 6.249904763 0.221180509 ALQEVGSGGTLGLSS(ph)PKS ddPTM_A459_MK2206_30min_R2 4 ALQEVGSGGTLGLSSPKS 18 1 A0A0M3HER3 A0A0M3HER3 1 ALQEVGSGGTLGLS(0.003)S(0.997)PKS;ALQEVGSGGTLGLS(0.001)S(0.997)PKS(0.001);ALQEVGSGGTLGLS(0.053)S(0.946)PKS(0.001);ALQEVGSGGTLGLS(0.007)S(0.993)PKS 292.35 1.17E-80 17902500 140412 164964 154180 160006 173907 125901 190912 143929 146069 179346 TRUE FALSE 151162.0507 156772.1276 159320.2842 146932.998 167078.5374 130692.2508 165845.0251 162741.0145 158773.8176 173493.9547 0.871281371 0.903617235 0.918304528 0.846905578 0.963022243 0.753295704 0.955912414 0.93802124 0.915154755 1 17.40452587 -8.483360058 0.819256198 0.996254319 0.884817325 0.266653275 0.056712622 0.887235613 1.337157754 0.05264151 0.019290569 3.29E-09 8.483360058 -0.111436993 ALQGS(ph)TGAAGPR ddPTM_A459_MK2206_30min_R1 1 ALQGSTGAAGPR 12 0 Q9HCE7-2;Q9HCE7 Q9HCE7-2 SMURF1 E3 ubiquitin-protein ligase SMURF1 1 ALQGS(0.5)T(0.5)GAAGPR 86.911 0.029241 80749000 10213 12000 12792 11578 12746 7751.4 9618.9 12364 9333 8253.8 TRUE FALSE 9344.330719 11218.79782 11923.71468 12469.73957 12238.29983 8190.277569 8977.240732 12255.90285 10303.19875 9276.343057 1.007329145 1.209398763 1.285389577 1.344251661 1.319302203 0.882920944 0.96775644 1.321199828 1.110696175 1 13.17934046 -6.734748021 24.99974543 1.071042077 1.24089189 0.287821949 0.137699235 332.1424925 311091.6315 0.04897522 0.048962632 1.84E-07 6.734748021 0.169849813 ALQLS(ph)NSPGASSAFLK ddPTM_A459_MK2206_30min_R1 1 ALQLSNSPGASSAFLK 16 0 Q12802-4;Q12802;Q12802-2;H0YMW2 Q12802-4 AKAP13 A-kinase anchor protein 13 1 ALQLS(0.726)NS(0.265)PGAS(0.009)S(0.001)AFLK 206.13 8.21E-08 95760000 4125.6 3721.5 4319 3588.1 3938.5 3278.1 3820.6 3480.1 3509.5 2993.7 TRUE FALSE 3774.696056 3479.229674 4025.838313 3864.456084 3781.621205 3463.703189 3565.734745 3449.673853 3874.325084 3364.582157 1.12189148 1.034074816 1.196534406 1.148569392 1.123949729 1.029460131 1.05978531 1.02529042 1.151502595 1 11.71621163 -6.747105383 24.65877876 1.055199448 1.125235474 0.316001029 0.052773554 261.5491311 449941.7669 0.017449206 0.017365006 1.79E-07 6.747105383 0.070036026 ALQLS(ph)NSPGASSAFLK ddPTM_A459_MK2206_30min_R2 1 ALQLSNSPGASSAFLK 16 0 Q12802-4;Q12802;Q12802-2;H0YMW2 Q12802-4 AKAP13 A-kinase anchor protein 13 1 ALQLS(0.66)NS(0.208)PGAS(0.101)S(0.031)AFLK 172.95 5.40E-06 82919000 81192 82464 82662 103930 86432 81644 107260 86269 81502 89397 TRUE FALSE 87408.12195 78368.95767 85417.90982 95438.58654 83038.24539 84751.01963 93176.63316 97544.65451 88590.89664 86479.98321 1.010732411 0.906209215 0.987718853 1.103591641 0.960201914 0.980007355 1.077435838 1.127944883 1.024409272 1 16.40007862 -7.262214353 24.96653446 1.068109574 0.991050262 0.240860944 0.056170714 92.67209529 2985484.696 0.023196646 0.016680831 5.47E-08 7.262214353 -0.077059312 ALQLSNS(ph)PGASSAFLK ddPTM_A459_MK2206_30min_R1 1 ALQLSNSPGASSAFLK 16 0 Q12802-4;Q12802;Q12802-2;H0YMW2 Q12802-4 AKAP13 A-kinase anchor protein 13 1 ALQLS(0.195)NS(0.632)PGAS(0.133)S(0.041)AFLK 157.7 7.43E-05 105260000 8415.9 8006.1 8036.5 6682.6 8000.7 7821.4 7922.9 7117.3 7266.1 6340.7 TRUE FALSE 7700.083511 7484.901435 7491.004771 7197.29501 7682.015177 8264.240909 7394.377797 7055.074196 8021.437097 7126.233786 1.080526368 1.050330604 1.051187064 1.009971778 1.077990901 1.159692645 1.037627731 0.990014418 1.125620817 1 12.7989241 -10.74086148 3.711181771 0.999925481 1.062520651 0.140064938 0.047856875 35191725.24 37621256.39 28620.7154 0.012205669 1.82E-11 10.74086148 0.06259517 ALQLSNS(ph)PGASSAFLK ddPTM_A459_MK2206_30min_R2 1 ALQLSNSPGASSAFLK 16 0 Q12802-4;Q12802;Q12802-2;H0YMW2 Q12802-4 AKAP13 A-kinase anchor protein 13 1 ALQLS(0.035)NS(0.866)PGAS(0.075)S(0.023)AFLK 75.143 0.031316 89073000 48176 53128 50584 59452 53232 56938 63954 45477 56239 58077 TRUE FALSE 51864.3916 50489.74078 52270.44531 54594.58142 51141.84421 59104.81549 55556.76298 51421.00005 61130.56656 56181.95225 0.923150398 0.898682562 0.930377874 0.971745894 0.910289553 1.05202495 0.988872062 0.915258335 1.088081922 1 15.77781914 -6.186721856 0.710636184 1.005129923 0.903367505 0.367095599 0.048585622 0.947122442 1.004829671 0.028573738 0.057075395 6.51E-07 6.186721856 -0.101762418 ALQT(ph)SPQPPEGPGLPR ddPTM_A459_MK2206_30min_R1 2 ALQTSPQPPEGPGLPR 16 0 A0A2R8YGT1;F8W9A8;B7WPL9;Q6PFW1-7;Q6PFW1-4;Q6PFW1-3;Q6PFW1-2;Q6PFW1;H7C398;Q6PFW1-5 A0A2R8YGT1 PPIP5K1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 1 ALQT(0.862)S(0.138)PQPPEGPGLPR;ALQT(0.682)S(0.318)PQPPEGPGLPR 127.03 0.0025075 7949300 3168.8 3613.2 3311.7 3093.3 3667 3640.1 3555.9 3340 3039.5 2872.7 TRUE FALSE 2899.27692 3377.980023 3086.911031 3331.546502 3520.935625 3846.199316 3318.692399 3310.798732 3355.466902 3228.591764 0.89800047 1.046270408 0.956116864 1.031888435 1.090548413 1.19129317 1.027907101 1.025462175 1.039297362 1 11.65668932 -3.442379221 0.733095171 1.061422903 3.73E-12 0.358181566 0.058783544 19.98529308 1.763515649 0.024047036 27.24548924 0.000361094 3.442379221 -1.061422903 ALQTS(ph)PQPPEGPGLPR ddPTM_A459_MK2206_30min_R2 2 ALQTSPQPPEGPGLPR 16 0 A0A2R8YGT1;F8W9A8;B7WPL9;Q6PFW1-7;Q6PFW1-4;Q6PFW1-3;Q6PFW1-2;Q6PFW1;H7C398;Q6PFW1-5 A0A2R8YGT1 PPIP5K1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 1 ALQT(0.051)S(0.949)PQPPEGPGLPR;ALQT(0.085)S(0.915)PQPPEGPGLPR 186.42 8.12E-07 19803600 39437 49746 45118 61526 53491 54292 53408 44373 45057 47510 TRUE FALSE 42456.32704 47275.68598 46622.2116 56499.12899 51390.67457 56358.1201 46395.46545 50172.70346 48975.97642 45959.75259 0.92377188 1.028632299 1.014413894 1.229317518 1.118166911 1.226249423 1.009480313 1.091666091 1.065627504 1 15.48808341 -5.13289528 1.777713196 1.108878436 0.930775554 0.322784906 0.076910169 0.553988664 2.787607962 0.021878681 0.131420264 7.36E-06 5.13289528 -0.178102882 ALRPPT(ph)SPGVFGALQNFK ddPTM_A459_MK2206_30min_R1 1 ALRPPTSPGVFGALQNFK 18 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 ALRPPT(0.5)S(0.5)PGVFGALQNFK 80.719 0.015269 6360100 2888.5 3179.9 2588.8 2185.9 2646.4 2107.3 2460 1976.6 2327.8 2244.7 TRUE FALSE 2642.817907 2972.887932 2413.079469 2354.258397 2540.988284 2226.613505 2295.897889 1959.318795 2569.78314 2522.790383 1.047577288 1.178412583 0.956512077 0.933196199 1.007213402 0.88259949 0.910062883 0.776647481 1.018627294 1 11.30080462 -5.381044512 5.180874219 0.924974294 1.111510989 0.481198006 0.073540698 0.167118159 6.326680194 0.019129252 0.041051766 4.16E-06 5.381044512 0.186536695 ALRPPTS(ph)PGVFGALQNFK ddPTM_A459_MK2206_30min_R1 1 ALRPPTSPGVFGALQNFK 18 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 ALRPPT(0.14)S(0.86)PGVFGALQNFK 91.276 0.0029863 7847900 2953 3007.7 2642.3 1994.7 2639 2438.1 2579.5 1891 2121.9 1749.3 TRUE FALSE 2701.831843 2811.898183 2462.948038 2148.33214 2533.883042 2576.143115 2407.426262 1874.467186 2342.479098 1966.016491 1.374267132 1.430251576 1.25276062 1.09273353 1.288841194 1.310336473 1.224519872 0.953434112 1.19148497 1 10.94105971 -1.522878746 0.124674916 0.918640022 2.498887576 0.538749181 0.100230563 73.05762202 0.623961656 0.656251867 20.15072626 0.03 1.522878746 1.580247554 ALS(ph)AIADLLTNEHER ddPTM_A459_MK2206_30min_R1 1 ALSAIADLLTNEHER 15 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14;O60716-27;O60716-29;O60716-25;O60716-26;O60716-31;O60716-32;O60716-30;O60716-28 O60716-5 CTNND1 Catenin delta-1 1 ALS(1)AIADLLTNEHER 115.56 0.0015606 958490 717.32 587.69 901.74 765.11 970.38 926.44 856.45 941.91 779.41 685.39 TRUE FALSE 656.3081672 549.4312742 840.5324012 824.0389048 931.7277098 978.8942322 799.3177832 933.6749802 860.4324586 770.3012876 0.85201489 0.71326802 1.091173564 1.069761817 1.209562706 1.270793971 1.037669021 1.212090639 1.117007686 1 9.589279027 -5.342627628 4.707033577 1.140288511 0.783160041 0.718916985 0.08577664 0.098577027 3.881304253 0.022273398 0.049208233 4.54E-06 5.342627628 -0.35712847 ALS(ph)ASHTDLAH ddPTM_A459_MK2206_30min_R2 1 ALSASHTDLAH 11 0 Q07866-6;Q07866-4;Q07866-7;H0YG16;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 ALS(0.991)AS(0.007)HT(0.002)DLAH 88.134 0.031074 54739000 24620 45109 37661 48522 43997 44259 37638 32456 40436 41674 TRUE FALSE 26504.92613 42868.95265 38916.59894 44557.59739 42269.45671 45943.30726 32696.08539 36698.11064 43953.05019 40314.18079 0.657459127 1.063371543 0.965332748 1.105258659 1.048500946 1.139631424 0.811031869 0.910302775 1.090262764 1 15.29899979 -4.756358852 24.9984844 1.011910528 0.65745858 0.565855311 0.093883129 124.9091116 614539.9715 0.024300846 0.198028052 1.75E-05 4.756358852 -0.354451948 ALS(ph)IESLSPTDSSNGVNWR ddPTM_A459_MK2206_30min_R2 3 ALSIESLSPTDSSNGVNWR 19 0 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 ALS(1)IESLSPTDSSNGVNWR;ALS(0.996)IES(0.004)LSPTDSSNGVNWR;ALS(0.999)IES(0.001)LSPTDSSNGVNWR 242.9 4.62E-30 16986900 20297.6 28542 19230.7 23315 25751.4 25222.5 24697.2 22576.4 26549 24498.1 TRUE FALSE 21851.59986 27124.64578 19871.84194 21410.08992 24740.27065 26182.35991 21454.42797 25527.213 28858.18403 23698.729 0.922057882 1.144561203 0.838519312 0.903427771 1.043949262 1.104800173 0.905298675 1.077155361 1.2177102 1 14.53252207 -7.969788841 10.42868822 1.121704868 0.985841972 0.217038085 0.102859457 0.594233282 200.8922193 0.056032558 0.026758099 1.07E-08 7.969788841 -0.135862896 ALS(ph)ISPLSDASLDLQR ddPTM_A459_MK2206_30min_R1 2 ALSISPLSDASLDLQR 16 0 P10070 P10070 GLI2 Zinc finger protein GLI2 1 ALS(0.97)IS(0.03)PLSDASLDLQR;ALS(0.907)IS(0.093)PLSDASLDLQR 186.08 7.95E-07 7473600 2699.9 2424.9 2119.88 1808.84 2158.28 1953.19 1771.1 2124.45 1778.52 1513.19 TRUE FALSE 2470.259327 2267.038569 1975.988452 1948.15717 2072.311137 2063.77793 1652.953151 2105.876158 1963.403518 1700.655401 1.452533726 1.333038173 1.161898201 1.145533168 1.218536769 1.213519169 0.971950666 1.238273289 1.154498152 1 10.73187513 -1.522878745 0.569622052 1.124895904 18.73504749 0.618424118 0.083046738 99.54366894 0.855534687 0.039320219 2160.380746 0.03 1.522878745 17.61015159 ALS(ph)ISPLSDASLDLQR ddPTM_A459_MK2206_30min_R2 3 ALSISPLSDASLDLQR 16 0 P10070 P10070 GLI2 Zinc finger protein GLI2 1 ALS(0.997)IS(0.003)PLSDASLDLQR;ALS(0.952)IS(0.045)PLS(0.002)DAS(0.001)LDLQR;ALS(0.983)IS(0.016)PLSDASLDLQR 83.292 0.018721 6342900 19125.4 25093 19453.4 19252 21429.5 17977.7 21446.3 16355.7 16575.1 20487.6 TRUE FALSE 20589.65533 23846.91811 20101.96665 17679.05002 20588.07016 18661.85397 18630.37505 18493.44615 18016.77224 19819.09129 1.038879887 1.203229642 1.014272872 0.892021221 1.038799905 0.941609971 0.940021658 0.933112718 0.909061469 1 14.2746032 -5.488300565 6.517268093 0.950717134 1.119440585 0.608553071 0.054234442 0.117916931 15.56529449 0.013545719 0.027476935 3.25E-06 5.488300565 0.16872345 ALS(ph)PAELR ddPTM_A459_MK2206_30min_R1 2 ALSPAELR 8 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 ALS(1)PAELR;ALS(1)PAELR 104.42 0.014617 32233000 10257.5 9600.5 8370.3 7641.9 11343.5 10050.9 11258.4 10712.7 10051.8 10348.6 TRUE FALSE 9385.045761 8975.505705 7802.147357 8230.480462 10891.66437 10619.97327 10507.37268 10619.03999 11096.72058 11630.6627 0.806922701 0.771710602 0.670825692 0.707653612 0.936461203 0.913101304 0.903419947 0.913021061 0.954091858 1 13.50564568 -6.265448354 24.9257766 0.929491429 0.73670529 0.836720604 0.042643676 135.2742504 841065.6998 0.01372117 0.016128472 5.43E-07 6.265448354 -0.192786138 ALS(ph)PAELR ddPTM_A459_MK2206_30min_R2 2 ALSPAELR 8 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 ALS(1)PAELR;ALS(1)PAELR 96.342 0.021156 25221000 51791 43481 45897 48857 49975 52380 68668 40089 54110 56108 TRUE FALSE 55756.15878 41321.79677 47427.18307 44865.22681 48012.7304 54373.3576 59651.80911 45328.76995 58816.38999 54277.20056 1.027248241 0.761310391 0.873795675 0.826594341 0.884583765 1.001771592 1.099021477 0.835134633 1.083629763 1 15.72805869 -6.720959465 4.953115307 0.999977341 0.863958708 0.333306065 0.090989804 0.222968092 12.51515103 0.029680855 0.028834007 1.90E-07 6.720959465 -0.136018633 ALS(ph)PGLEESGLGLLAR ddPTM_A459_MK2206_30min_R1 6 ALSPGLEESGLGLLAR 16 0 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR 308.03 7.52E-102 60881300 5414.72 5299.62 5466.7 4544.05 5900.23 4767.31 5532.71 5201.14 4950.14 4170.52 TRUE FALSE 4954.16963 4954.613775 5095.635635 4894.033518 5665.211345 5037.230972 5163.633011 5155.666981 5464.724767 4687.195503 1.05695818 1.057052937 1.087139555 1.04412831 1.208656934 1.074679084 1.101646604 1.099947074 1.165883685 1 12.19450926 ALS(ph)PGLEESGLGLLAR ddPTM_A459_MK2206_30min_R2 3 ALSPGLEESGLGLLAR 16 0 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR 220.25 8.47E-11 19345700 14475.3 18040.2 15161.8 20658.9 18774.9 22530.3 20049.3 14442.7 18231.1 17561.3 TRUE FALSE 15583.5401 17144.3499 15667.28684 18971.00179 18037.70309 23387.70635 17416.80283 16330.41048 19816.80812 16988.27622 0.917311439 1.009187141 0.922241117 1.116711404 1.061773594 1.37669685 1.025224843 0.961275309 1.166499053 1 14.05225185 -5.76676328 24.89604364 1.106229757 0.955540613 0.28028574 0.110985445 164.758316 770460.3891 0.031949217 0.049009537 1.71E-06 5.76676328 -0.150689145 ALS(ph)PLPTR ddPTM_A459_MK2206_30min_R1 1 ALSPLPTR 8 0 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 ALS(1)PLPTR 104.05 0.014921 12316000 6300.7 7643.6 6838.2 5709.3 6769.4 6591.5 6669.9 6193 5205.1 6777 TRUE FALSE 5764.792379 7146.000251 6374.042036 6149.031275 6499.760464 6964.705034 6224.963141 6138.855254 5746.188772 7616.585924 0.756873544 0.938215668 0.836863406 0.807321198 0.853369282 0.91441298 0.817290477 0.805985164 0.754431031 1 12.89492875 ALS(ph)PLPTR ddPTM_A459_MK2206_30min_R2 2 ALSPLPTR 8 0 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 ALS(0.995)PLPT(0.005)R;ALS(1)PLPTR 111.06 0.011759 28178400 80215 92867 99256 121037 121720 113230 123284 83910 114419 123353 TRUE FALSE 86356.32207 88255.35982 102565.1455 111147.8899 116940.6612 117539.047 107096.6627 94877.32511 124370.9578 119328.0017 0.723688663 0.739603099 0.859522862 0.931448514 0.979993459 0.98500809 0.897498166 0.795096907 1.042261297 1 16.8645731 -5.410454252 2.151806429 0.940161391 0.720973968 0.644213898 0.063715558 0.217775839 1.919191239 0.018623527 0.054072876 3.89E-06 5.410454252 -0.219187423 ALS(ph)PVIPLIPR ddPTM_A459_MK2206_30min_R1 2 ALSPVIPLIPR 11 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ALS(1)PVIPLIPR;ALS(1)PVIPLIPR 150.09 0.00061963 405143000 11033.7 11186.6 12021.5 10388.5 12063.8 10681 11543.3 10190.8 10293.4 8541.7 TRUE FALSE 10095.22587 10458.35031 11205.51407 11188.62407 11583.2733 11285.74899 10773.26752 10101.70291 11363.43577 9599.910283 1.051595856 1.089421672 1.167251958 1.165492566 1.206602245 1.17560984 1.122225854 1.052270554 1.183702288 1 13.22880521 -10.31833533 5.456185116 0.999999964 1.135923329 0.376005263 0.052123041 38555133.08 12.40588469 17.65038268 0.01350418 4.80E-11 10.31833533 0.135923365 ALS(ph)PVIPLIPR ddPTM_A459_MK2206_30min_R2 2 ALSPVIPLIPR 11 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ALS(1)PVIPLIPR;ALS(1)PVIPLIPR 139.32 0.0011779 376250000 1204790 1483670 1303810 1615590 1323660 1485230 1515370 1117730 1285400 1293260 TRUE FALSE 1297029.649 1409993.105 1347278.375 1483591.129 1271686.458 1541751.468 1316400.099 1263821.149 1397201.769 1251061.032 1.036743704 1.127037826 1.076908592 1.185866309 1.016486346 1.23235512 1.052226922 1.010199436 1.116813435 1 20.25472074 -8.457122475 0.711013817 1.006962368 1.107890759 0.144755935 0.068986865 1.323067555 1.535860773 0.064968455 0.025878583 3.49E-09 8.457122475 0.100928391 ALS(ph)PVR ddPTM_A459_MK2206_30min_R1 1 ALSPVR 6 0 Q02535 Q02535 ID3 DNA-binding protein inhibitor ID-3 1 ALS(1)PVR 93.195 0.042231 11664000 4876.2 4731.5 5181.5 4651 4575.4 4774.6 5368.3 4568.8 3858.8 4505.6 TRUE FALSE 4461.453584 4423.47849 4829.794216 5009.220826 4393.152129 5044.933726 5010.190502 4528.855463 4259.936069 5063.787744 0.88105067 0.873551324 0.953790811 0.989224091 0.867562456 0.996276697 0.989415583 0.894361236 0.841254864 1 12.30600122 -5.255908512 24.03816852 0.940446331 0.877300985 0.185407053 0.053779146 464.2711716 2017779.053 0.01410478 0.035042634 5.55E-06 5.255908512 -0.063145347 ALS(ph)PVR ddPTM_A459_MK2206_30min_R2 3 ALSPVR 6 0 Q02535 Q02535 ID3 DNA-binding protein inhibitor ID-3 1 ALS(1)PVR;ALS(1)PVR;ALS(1)PVR 96.19 0.037753 96831000 330688 394458 375560 380008 421832 424020 426850 352045 407097 387570 TRUE FALSE 356005.7275 374869.7893 388080.983 348960.1308 405268.7561 440156.3782 370804.0823 398058.4903 442505.5612 374923.6226 0.949542003 0.999856415 1.035093442 0.930749917 1.080936841 1.173989452 0.989012321 1.061705548 1.180255216 1 18.5162372 -6.287428778 21.57150032 1.08412036 0.984333991 0.378442725 0.063915492 149.2038933 123839.9942 0.019662926 0.022311913 5.16E-07 6.287428778 -0.099786369 ALS(ph)PVTSR ddPTM_A459_MK2206_30min_R1 4 ALSPVTSR 8 0 Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;Q96L91-4;A0A0A0MR72;A0A0A0MR80 Q96L91-3 EP400 E1A-binding protein p400 1 ALS(1)PVTSR;ALS(0.995)PVT(0.005)SR;ALS(1)PVTSR;ALS(0.997)PVT(0.003)SR 101.46 0.017015 91112000 16718.9 15974 15789.9 14029.5 17346.5 14928 16880 14394.1 13135.4 12958.6 TRUE FALSE 15296.86976 14934.0897 14718.12558 15110.05452 16655.55217 15773.21046 15753.966 14268.2539 14500.87184 14564.0092 1.050319974 1.025410619 1.010582002 1.037492789 1.143610385 1.083026675 1.081705304 0.979692728 0.995664836 1 13.83011994 -7.766006025 24.99960719 0.990759069 1.061406375 0.452204076 0.035273917 121.7647394 666568.9636 0.021117721 0.010686374 1.71E-08 7.766006025 0.070647306 ALS(ph)PVTSR ddPTM_A459_MK2206_30min_R2 4 ALSPVTSR 8 0 Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;Q96L91-4;A0A0A0MR72;A0A0A0MR80 Q96L91-3 EP400 E1A-binding protein p400 1 ALS(0.981)PVT(0.019)SR;ALS(0.874)PVT(0.126)SR;ALS(0.983)PVT(0.015)S(0.002)R;ALS(0.986)PVT(0.014)SR 99.013 0.018995 213292000 768360 871450 767210 952020 899080 836730 992390 666510 756860 823380 TRUE FALSE 827186.2324 828175.0602 792788.3985 874236.9206 863777.6017 868572.3465 862088.0009 753625.1455 822690.3147 796513.178 1.038509161 1.039750607 0.995323644 1.097579983 1.084448601 1.090468269 1.082327355 0.946155276 1.032864662 1 19.60333871 -7.748325368 24.98954516 0.992132466 1.06126131 0.442190356 0.035094999 212.2494524 404456.2123 0.017609606 0.010088161 1.79E-08 7.748325368 0.069128844 ALS(ph)SAGPIPIRPPIVPVK ddPTM_A459_MK2206_30min_R1 2 ALSSAGPIPIRPPIVPVK 18 1 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 ALS(0.793)S(0.207)AGPIPIRPPIVPVK;ALS(0.87)S(0.13)AGPIPIRPPIVPVK 141.64 0.00016945 46907000 6304.7 6075.6 6656.9 5606 7283.1 5824.7 6759.4 5877.7 5182.6 4545.9 TRUE FALSE 5768.452158 5680.077336 6205.048175 6037.775091 6992.998705 6154.48948 6308.492759 5826.311889 5721.349816 5109.080412 1.129058792 1.111761193 1.214513704 1.181773353 1.368739214 1.204617854 1.234760906 1.140383674 1.119839453 1 12.31884793 -8.49634208 1.381121146 1.003067584 1.207318154 0.468436348 0.066967838 0.415379725 1.74178922 0.068564103 0.020689402 3.19E-09 8.49634208 0.204250571 ALS(ph)SAGPIPIRPPIVPVK ddPTM_A459_MK2206_30min_R2 1 ALSSAGPIPIRPPIVPVK 18 1 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 ALS(0.857)S(0.143)AGPIPIRPPIVPVK 58.079 0.031826 18936000 7242 13747 11810 19648 15454 21807 12487 10871 16999 11187 TRUE FALSE 7796.453088 13064.34397 12203.73951 18042.69555 14847.19831 22636.88067 10847.4419 12291.87703 18477.54229 10821.96911 0.720428326 1.207205809 1.127681976 1.667228521 1.371949796 2.091752475 1.002353804 1.13582629 1.707410372 1 13.40167541 -4.617212751 1.224358186 1.426562371 0.214593789 0.276221025 0.330869393 2.735573682 2.729815046 0.099138024 4.63090289 2.41E-05 4.617212751 -1.211968582 ALS(ph)SDSILSPAPDAR ddPTM_A459_MK2206_30min_R1 6 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALS(0.714)S(0.188)DS(0.098)ILSPAPDAR;ALS(0.845)S(0.128)DS(0.027)ILSPAPDAR;ALS(0.946)S(0.051)DS(0.003)ILSPAPDAR;ALS(0.772)S(0.043)DS(0.182)ILS(0.004)PAPDAR;ALS(0.459)S(0.459)DS(0.083)ILSPAPDAR;ALS(0.488)S(0.488)DS(0.021)ILS(0.002)PAPDAR 260.73 2.05E-36 1775151200 12897.15 11121.69 11401.01 10397.65 12750.08 11008.73 13964.5 11179.28 12172.42 11958.11 TRUE FALSE 11800.17967 10397.66596 10627.14121 11198.4788 12242.21731 11632.03478 13032.95368 11081.54073 13437.78662 13439.57095 0.878017588 0.773660558 0.790735154 0.833246749 0.910908344 0.865506408 0.969744774 0.824545722 0.999867233 1 13.71419946 -7.309016307 0.365499893 1.002405019 0.789650595 0.547530369 0.053099651 1.0589693 0.356192214 0.063259236 0.079577868 4.91E-08 7.309016307 -0.212754425 ALS(ph)SDSILSPAPDAR ddPTM_A459_MK2206_30min_R2 6 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALS(0.997)S(0.003)DSILSPAPDAR;ALS(0.974)S(0.026)DSILSPAPDAR;ALS(0.755)S(0.173)DS(0.068)ILS(0.003)PAPDAR;ALS(0.42)S(0.42)DS(0.16)ILSPAPDAR;ALS(0.678)S(0.079)DS(0.242)ILS(0.001)PAPDAR;ALS(0.839)S(0.157)DS(0.004)ILSPAPDAR 226.93 1.10E-13 874850300 161052 198301.9 153002 184294 157231.4 165413 171347 163294.2 151863 159447.9 TRUE FALSE 173382.2649 188454.516 158103.0103 169236.5907 151057.7052 171707.9076 148848.9331 184637.3126 165071.7692 154245.1281 1.124069636 1.221785857 1.025011372 1.097192454 0.979335342 1.113214464 0.965015459 1.197038214 1.070191139 1 17.2348654 -5.265602944 24.99712998 1.06045683 1.172927748 0.310722943 0.069467619 380.3479722 2283536.976 0.017284554 0.038061058 5.42E-06 5.265602944 0.112470918 ALS(ph)TPVVEKR ddPTM_A459_MK2206_30min_R2 1 ALSTPVVEKR 10 1 E5RK24;E5RIW4;E5RH41;P29084 E5RK24 GTF2E2 Transcription initiation factor IIE subunit beta 1 ALS(0.5)T(0.5)PVVEKR 66.56 0.043847 3927100 22844 26903 23537 27166 24679 21354 20497 16191 19014 22876 TRUE FALSE 24592.9542 25567.03614 24321.71183 24946.4509 23709.97846 22166.64143 17805.71928 18307.21929 20667.80335 22129.55799 1.111317009 1.155334243 1.099059992 1.12729097 1.071416721 1.001675742 0.804612513 0.827274512 0.933945601 1 14.43368702 -6.909776348 2.479858116 0.877992827 1.119282572 0.778285651 0.055368721 0.121136571 1.512947469 0.02175431 0.018370604 1.23E-07 6.909776348 0.241289744 ALS(ph)TTSSSTTNGNR ddPTM_A459_MK2206_30min_R1 1 ALSTTSSSTTNGNR 14 0 C9JUH3;A0A0A0MT72;Q9BSQ5-3;Q9BSQ5-4;Q9BSQ5;Q9BSQ5-2 C9JUH3 CCM2 Cerebral cavernous malformations 2 protein 1 ALS(0.486)T(0.486)T(0.027)SSSTTNGNR 110.25 0.0043092 7218800 1399.1 1419.6 1245 1138.2 1699.2 1327.7 1424.9 1258 1135.2 1483.3 TRUE FALSE 1280.099198 1327.183782 1160.492869 1225.864361 1631.517266 1402.873227 1329.847521 1247.001439 1253.208102 1667.062402 0.767877193 0.796121237 0.696130431 0.735344016 0.978677981 0.841524123 0.797719101 0.748023251 0.751746366 1 10.70309239 ALS(ph)TTSSSTTNGNR ddPTM_A459_MK2206_30min_R2 2 ALSTTSSSTTNGNR 14 0 C9JUH3;A0A0A0MT72;Q9BSQ5-3;Q9BSQ5-4;Q9BSQ5;Q9BSQ5-2 C9JUH3 CCM2 Cerebral cavernous malformations 2 protein 1 ALS(0.456)T(0.456)T(0.057)S(0.008)S(0.008)S(0.008)T(0.002)T(0.008)NGNR;ALS(0.49)T(0.49)T(0.018)SSSTTNGNR 143.46 0.00053778 8463700 28516 34272 33733 38478 34804 35269 31206 28357 28369 27939 TRUE FALSE 30699.20689 32570.10232 34857.64138 35334.22431 33437.42008 36611.18651 27108.61471 32063.35726 30836.48434 27027.35272 1.135856967 1.205079264 1.289717189 1.307350545 1.237169635 1.354597577 1.003006658 1.186329923 1.140936172 1 14.72213259 -7.262245991 24.99979645 1.098095684 1.255846825 0.54322656 0.07691592 65.09501415 2017475.513 0.031309808 0.022514626 5.47E-08 7.262245991 0.157751141 ALSAIADLLTNEHER ddPTM_A459_MK2206_30min_R1 2 ALSAIADLLTNEHER 15 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14;O60716-27;O60716-29;O60716-25;O60716-26;O60716-31;O60716-32;O60716-30;O60716-28 O60716-5 CTNND1 Catenin delta-1 0 ; 192.54 1.99E-20 2756900 3762 3954.4 3951.2 3544.5 3687.8 3402.2 3442.5 3501.6 3334.9 3146.4 FALSE TRUE 3442.022145 3696.967841 3683.003553 3817.498004 3540.907117 3594.829624 3212.857106 3470.98588 3681.574789 3536.199786 0.973367556 1.04546351 1.041514557 1.079548169 1.001331184 1.0165799 0.908562101 0.981558195 1.041110517 1 11.78798407 -6.739034299 2.552427353 0.981093525 1.035419832 0.205081824 0.040567053 0.398338936 5.318308809 0.015544086 0.01459199 1.82E-07 6.739034299 0.054326307 ALSAS(ph)HTDLAH ddPTM_A459_MK2206_30min_R1 5 ALSASHTDLAH 11 0 Q07866-6;Q07866-4;Q07866-7;H0YG16;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 ALS(0.002)AS(0.934)HT(0.063)DLAH;ALS(0.001)AS(0.945)HT(0.053)DLAH;ALS(0.006)AS(0.932)HT(0.062)DLAH;ALS(0.013)AS(0.938)HT(0.049)DLAH;ALS(0.004)AS(0.768)HT(0.228)DLAH 122.18 0.002796 130510200 28301.3 22163.5 24736 20628.2 34859.1 29931.9 31901.3 27671.6 20214.7 18975.8 TRUE FALSE 25894.12582 20720.65212 23056.98924 22216.98754 33470.58823 31626.61831 29773.22248 27429.67012 22316.0904 21326.66536 1.214166649 0.971584248 1.081134291 1.0417469 1.569424364 1.482961249 1.396056157 1.286167793 1.0463938 1 14.38037078 -6.218337867 24.94314662 1.325409883 1.069900959 0.265649708 0.174938722 563.6938461 326213.3142 0.052605974 0.067913505 6.05E-07 6.218337867 -0.255508924 ALSAS(ph)HTDLAH ddPTM_A459_MK2206_30min_R2 4 ALSASHTDLAH 11 0 Q07866-6;Q07866-4;Q07866-7;H0YG16;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 ALSAS(0.938)HT(0.061)DLAH;ALS(0.001)AS(0.967)HT(0.033)DLAH;ALS(0.118)AS(0.865)HT(0.016)DLAH;ALS(0.041)AS(0.941)HT(0.018)DLAH 146.11 0.00068999 312717200 303503 416590 345703 471511 452734 521155 457548 332480 405952 398602 TRUE FALSE 326739.423 395902.7464 357228.5655 432987.043 434957.3884 540987.9187 397471.398 375936.2776 441260.9712 385595.6494 0.847362836 1.026730325 0.926433081 1.122904378 1.128014253 1.402992797 1.030798451 0.974949479 1.144361903 1 18.55672925 -5.764622728 24.85546766 1.12286747 0.942830884 0.32676556 0.118673379 93.45385455 729694.9243 0.034651805 0.053935016 1.72E-06 5.764622728 -0.180036586 ALSASHT(ph)DLAH ddPTM_A459_MK2206_30min_R1 1 ALSASHTDLAH 11 0 Q07866-6;Q07866-4;Q07866-7;H0YG16;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 ALS(0.005)AS(0.49)HT(0.505)DLAH 97.911 0.025447 118560000 7588.1 5881.7 6501.2 5406.3 9118 7675.4 8091.8 6979.6 5441.2 4737.3 TRUE FALSE 6942.692248 5498.800261 6059.916657 5822.694163 8754.810752 8109.974515 7552.010786 6918.578093 6006.832212 5324.192489 1.303989715 1.032795165 1.138185118 1.093629536 1.644345273 1.5232309 1.418433087 1.299460549 1.128214696 1 12.37834702 -4.433946187 21.50066252 1.273204517 3.818912761 0 0.206391907 6533.116796 1744658.406 0.053972142 85068.25299 3.68E-05 4.433946187 2.545708244 ALSGGGSVAS(ph)PPPSPAMPK ddPTM_A459_MK2206_30min_R1 2 ALSGGGSVASPPPSPAMPK 19 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 ALSGGGSVAS(1)PPPSPAMPK;ALSGGGS(0.044)VAS(0.955)PPPS(0.001)PAMPK 178.51 6.67E-13 25862000 4436.1 4010.3 3869.3 3437.2 3509.4 3105.2 3278 3101.9 3029.6 2569.9 TRUE FALSE 4058.7864 3749.228741 3606.662696 3701.93374 3369.613167 3281.013741 3059.330601 3074.780415 3344.537762 2888.278614 1.405261383 1.298084168 1.248723956 1.281709362 1.166651012 1.135975499 1.059222814 1.064571957 1.15796923 1 11.4959942 -2.128697485 0.205110356 0.99563573 2.605146666 0.882437701 0.040949184 13.25479376 0.201981767 0.076502857 6.56212109 0.007435369 2.128697485 1.609510935 ALSGGGSVAS(ph)PPPSPAMPK ddPTM_A459_MK2206_30min_R2 5 ALSGGGSVASPPPSPAMPK 19 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 ALSGGGS(0.012)VAS(0.95)PPPS(0.037)PAMPK;ALSGGGS(0.022)VAS(0.977)PPPS(0.001)PAMPK;ALSGGGS(0.029)VAS(0.969)PPPS(0.002)PAMPK;ALSGGGS(0.003)VAS(0.996)PPPSPAMPK;ALSGGGSVAS(0.754)PPPS(0.246)PAMPK 174.35 7.73E-10 38279100 151540.8 175551 155606 169180 145891 141521.6 152037.4 127458.5 122070.4 131898.2 TRUE FALSE 163142.8802 166833.3926 160793.8264 155357.4528 140162.5863 146907.3037 132074.7068 144117.7636 132687.8627 127594.3725 1.278605607 1.307529394 1.260195283 1.217588595 1.098501317 1.151361935 1.035113886 1.129499371 1.039919395 1 16.96120518 -6.143355921 0.569214556 1.039349317 1.340448116 0.867991808 0.037919362 0.384551977 0.243533293 0.026746033 0.063532942 7.19E-07 6.143355921 0.301098799 ALSGTS(ph)PDDVQPGPSVGPPSK ddPTM_A459_MK2206_30min_R1 1 ALSGTSPDDVQPGPSVGPPSK 21 0 A0A075B797;M0R3B2;Q9Y314 A0A075B797 NOSIP Nitric oxide synthase-interacting protein 1 ALS(0.002)GT(0.097)S(0.9)PDDVQPGPSVGPPSK 179.1 2.04E-12 0 700.06 822.91 687.47 452.64 842.37 681.38 631.08 602.3 879.64 525.79 TRUE FALSE 640.5162208 769.3384094 640.8064518 487.5024112 808.8166192 719.9591468 588.9818047 597.0341546 971.0817258 590.9288347 1.083914311 1.301913808 1.084405455 0.824976516 1.368720854 1.218351694 0.996705136 1.010331735 1.643314167 1 9.206840588 -6.31028008 24.99990979 1.196882845 1.090851562 0.081028765 0.214068235 1345.275723 688598.2887 0.067216447 0.076216548 4.89E-07 6.31028008 -0.106031282 ALSGTS(ph)PDDVQPGPSVGPPSK ddPTM_A459_MK2206_30min_R2 1 ALSGTSPDDVQPGPSVGPPSK 21 0 A0A075B797;M0R3B2;Q9Y314 A0A075B797 NOSIP Nitric oxide synthase-interacting protein 1 ALS(0.006)GT(0.147)S(0.848)PDDVQPGPSVGPPSK 269.99 6.29E-60 9795800 64102 68908 68966 76705 72856 64658 74904 63416 58245 73160 TRUE FALSE 69009.69841 65486.12892 71265.29202 70437.95613 69995.30737 67118.6055 65069.01482 71704.68894 63311.04482 70772.79519 0.975087931 0.925300869 1.006958844 0.995268817 0.989014312 0.948367311 0.919407163 1.013167401 0.894567533 1 16.11090728 -8.245793249 24.99268728 0.94728374 0.970067838 0.058728892 0.038519191 2283.682927 3647905.877 0.02549843 0.009586349 5.68E-09 8.245793249 0.022784098 ALSQTVPSSGTNGVSLPADCTGAVPAAS(ph)PDTAAWR ddPTM_A459_MK2206_30min_R1 2 ALSQTVPSSGTNGVSLPADCTGAVPAASPDTAAWR 35 0 Q9H6Z4;Q9H6Z4-3;Q9H6Z4-2;B7Z7F3;K7EN31 Q9H6Z4 RANBP3 Ran-binding protein 3 1 ALSQTVPSSGTNGVSLPADCTGAVPAAS(0.986)PDT(0.014)AAWR;ALSQTVPSSGTNGVSLPADCTGAVPAAS(0.963)PDT(0.037)AAWR 177.99 4.30E-42 21577000 4615.7 5663.8 4707.8 4028.6 5304.5 5093.1 5184.2 4633.5 5053.9 4204.2 TRUE FALSE 4223.110477 5295.085591 4388.247653 4338.88347 5093.210533 5381.466921 4838.371477 4592.989798 5579.270991 4725.048036 0.893770909 1.120641642 0.92872022 0.91827288 1.077917197 1.138923219 1.023983553 0.972051451 1.180786089 1 12.20611328 -6.279994636 24.01265009 1.065797147 0.973827056 0.26337911 0.081649911 748.2215194 968282.3602 0.02512618 0.028548775 5.25E-07 6.279994636 -0.091970091 ALSQTVPSSGTNGVSLPADCTGAVPAAS(ph)PDTAAWR ddPTM_A459_MK2206_30min_R2 2 ALSQTVPSSGTNGVSLPADCTGAVPAASPDTAAWR 35 0 Q9H6Z4;Q9H6Z4-3;Q9H6Z4-2;B7Z7F3;K7EN31 Q9H6Z4 RANBP3 Ran-binding protein 3 1 ALSQTVPSSGTNGVSLPADCT(0.01)GAVPAAS(0.956)PDT(0.034)AAWR;ALSQTVPSSGTNGVSLPADCT(0.067)GAVPAAS(0.899)PDT(0.034)AAWR 135.23 4.37E-26 14665200 70730 85661 72436 86952 78947 84274 86406 62016 67590 86002 TRUE FALSE 76145.14318 81407.1993 74850.98009 79847.74345 75847.1441 87481.10612 75060.78841 70121.70413 73468.85603 83195.76178 0.915252671 0.97850176 0.899697034 0.959757345 0.911670769 1.051509166 0.902218897 0.842851879 0.883084119 1 16.34422242 -7.494779737 24.97229287 0.892287843 0.952188384 0.121959468 0.055232326 1077.160547 957302.4302 0.0221482 0.014893622 3.20E-08 7.494779737 0.059900541 ALSS(ph)AGPIPIRPPIVPVK ddPTM_A459_MK2206_30min_R2 1 ALSSAGPIPIRPPIVPVK 18 1 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 ALS(0.266)S(0.734)AGPIPIRPPIVPVK 75.017 0.0086819 19738000 12887 16748 17925 23581 22558 25668 20826 16555 19398 18618 TRUE FALSE 13873.63863 15916.31867 18522.61055 21654.35687 21672.25958 26644.81373 18091.52118 18718.79534 21085.20298 18010.49618 0.770308518 0.883724608 1.028434218 1.202318728 1.203312743 1.479404757 1.004498765 1.039327021 1.170717495 1 14.13655031 -5.3078094 1.941230984 1.167388813 0.783521954 0.499062379 0.132172248 0.324148423 2.217184928 0.03975626 0.148848025 4.92E-06 5.3078094 -0.383866858 ALSS(ph)DSILSPAPDAR ddPTM_A459_MK2206_30min_R2 1 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALS(0.036)S(0.497)DS(0.069)ILS(0.399)PAPDAR 96.707 0.0099994 14838000 44656 47688 47605 40752 38954 24167 39271 32745 24296 40030 TRUE FALSE 48074.89769 45319.88326 49192.12694 37422.43124 37424.47023 25086.69212 34114.67053 37024.88393 26409.22216 38723.82438 1.241481142 1.170335936 1.270332353 0.966392959 0.966445614 0.64783612 0.880973692 0.956126739 0.681988997 1 15.24093382 -5.995002659 2.023943042 0.839599446 1.226120423 0.681316814 0.11278386 0.18112363 1.491015015 0.03511013 0.055926277 1.01E-06 5.995002659 0.386520977 ALSSDS(ph)ILSPAPDAR ddPTM_A459_MK2206_30min_R1 1 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALS(0.108)S(0.108)DS(0.785)ILSPAPDAR 255.39 8.14E-29 123930000 1395.9 1424.3 1448.1 1241.1 1366.9 1001.4 1614.7 1288.3 1727.1 1345 TRUE FALSE 1277.171375 1331.577811 1349.807007 1336.689737 1312.453479 1058.098403 1506.986309 1277.036529 1906.638225 1511.628754 0.844897513 0.880889443 0.89294875 0.884271177 0.868237968 0.699972397 0.996928846 0.844808307 1.261313811 1 10.56188815 -8.246073674 24.95994932 1.130656904 0.865403715 0.583829791 0.090008931 445.4837433 723643.8859 0.057799825 0.021667662 5.67E-09 8.246073674 -0.265253189 ALSSDS(ph)ILSPAPDAR ddPTM_A459_MK2206_30min_R2 1 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALS(0.314)S(0.314)DS(0.371)ILS(0.001)PAPDAR 188.92 2.56E-05 393390000 46724 58224 58360 61090 49469 71364 55267 47876 42479 58779 TRUE FALSE 50301.22536 55332.68083 60305.69327 56098.75158 47526.5985 74079.80703 48010.37651 54133.55758 46173.74664 56861.04604 0.884634189 0.97312105 1.060580089 0.986593731 0.835837569 1.302821741 0.844345644 0.95203239 0.812045325 1 15.79515302 ALSSDSILS(ph)PAPDAR ddPTM_A459_MK2206_30min_R1 3 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALSSDSILS(1)PAPDAR;ALSSDS(0.003)ILS(0.997)PAPDAR;ALS(0.001)SDS(0.008)ILS(0.991)PAPDAR 238.65 5.34E-20 96960000 7261.8 8114.6 7317 6075.6 6540.1 5638.4 5597.2 5398.1 4896.8 4807.5 TRUE FALSE 6644.145777 7586.338065 6820.342426 6543.543765 6279.593968 5957.641335 5223.821001 5350.904981 5405.839883 5403.089395 1.229693846 1.404074134 1.262304198 1.211074496 1.162222852 1.102636085 0.966821131 0.990341745 1.000509059 1 12.39956884 -6.533455 0.939507622 0.980645479 1.317543268 0.884801292 0.046862054 0.166342142 0.31962776 0.024924732 0.029243085 2.93E-07 6.533455 0.33689779 ALSSDSILS(ph)PAPDAR ddPTM_A459_MK2206_30min_R2 2 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALSSDS(0.003)ILS(0.997)PAPDAR;ALS(0.016)S(0.078)DS(0.06)ILS(0.846)PAPDAR 144.4 0.00037347 39728000 99872 91734 88550 96299 86218 74481 83344 60810 68707 92669 TRUE FALSE 107518.2771 87178.62295 91502.2128 88431.06365 82832.64811 77315.42665 72400.83269 68758.07579 74683.01067 89645.21812 1.199375487 0.972484922 1.020714933 0.986456004 0.924005205 0.862460132 0.80763742 0.767002158 0.833095309 1 16.45193901 -5.200766053 0.56372773 0.832757819 1.253451634 0.633824677 0.073036589 1.641916435 0.552346115 0.043151175 0.425525413 6.30E-06 5.200766053 0.420693815 ALSSGGSIT(ph)SPPLSPALPK ddPTM_A459_MK2206_30min_R1 1 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JHW1;C9JW88;C9JRZ2;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JHT0 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ALSSGGS(0.017)IT(0.491)S(0.491)PPLS(0.002)PALPK 247.44 3.71E-37 359630000 5792.8 6324.2 5689.1 4831.8 5292.5 4959.6 5578.3 4354.6 4120.6 3886.9 TRUE FALSE 5300.091941 5912.493431 5302.939743 5203.946073 5081.688518 5240.408266 5206.181785 4316.528191 4548.951116 4368.438517 1.213269208 1.353456941 1.213921112 1.191260001 1.163273444 1.199606735 1.191771789 0.988116961 1.041321996 1 12.09290197 -7.472807774 0.623441166 0.979355707 1.261354946 0.739046744 0.054964455 0.395089146 0.307754919 0.052573559 0.033141062 3.37E-08 7.472807774 0.281999239 ALSSGGSIT(ph)SPPLSPALPK ddPTM_A459_MK2206_30min_R2 1 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JHW1;C9JW88;C9JRZ2;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JHT0 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ALSS(0.001)GGS(0.019)IT(0.873)S(0.107)PPLSPALPK 208.07 4.94E-16 361660000 116940 108160 120500 114760 102830 100740 126330 100760 81880 99305 TRUE FALSE 125893.0163 102788.9317 124517.4099 105383.7409 98792.37752 104573.7313 109742.7193 113929.678 89001.77439 96064.68598 1.310502554 1.069997061 1.296182969 1.097008123 1.028394321 1.088576205 1.142383573 1.185968359 0.926477545 1 16.55171856 -1.522878745 0.180125715 1.000525501 2.035750856 0.382776114 0.091669378 69.21683347 0.780307669 0.208772566 19.61309354 0.03 1.522878745 1.035225354 ALSSGGSITS(ph)PPLS(ph)PALPK ddPTM_A459_MK2206_30min_R2 1 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JHW1;C9JW88;C9JRZ2;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JHT0 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 2 ALS(0.001)S(0.005)GGS(0.025)IT(0.262)S(0.707)PPLS(1)PALPK 122.97 0.040972 0 20826 20896 18138 16603 16227 13382 15670 10641 11050 13415 TRUE FALSE 22420.45457 19858.33503 18742.71187 15246.48179 15589.84645 13891.26139 13612.51018 12031.81524 12011.10903 12977.26965 1.727671165 1.53023984 1.44427236 1.174860522 1.201319451 1.070430203 1.048950245 0.927145352 0.925549777 1 13.66369926 -5.051386885 0.466214914 0.934620516 2.152940901 0.96443068 0.049068932 0.631637797 0.128114679 0.035116873 0.41357826 8.88E-06 5.051386885 1.218320385 ALSSGGSITS(ph)PPLSPALPK ddPTM_A459_MK2206_30min_R1 1 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JHW1;C9JW88;C9JRZ2;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JHT0 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ALS(0.001)S(0.003)GGS(0.035)IT(0.07)S(0.892)PPLSPALPK 96.467 0.00108 25110000 5633.7 5183.2 5215.3 4400.5 5606.1 4291.4 4912.1 4545.3 4501.9 3884.3 TRUE FALSE 5154.524231 4845.772738 4861.299967 4739.427272 5382.797166 4534.375359 4584.422772 4505.560921 4969.888615 4365.516409 1.180736423 1.110011344 1.113568135 1.085651004 1.233026442 1.038680178 1.050144437 1.032079713 1.138442317 1 12.09193661 -6.827206275 24.99999353 1.053766186 1.137681889 0.451807215 0.050764753 58.66794164 22300.58173 0.01739641 0.015342196 1.49E-07 6.827206275 0.083915703 ALSSGGSITS(ph)PPLSPALPK ddPTM_A459_MK2206_30min_R2 1 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JHW1;C9JW88;C9JRZ2;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JHT0 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ALSSGGS(0.006)IT(0.158)S(0.835)PPLS(0.001)PALPK 133.86 0.00021826 376200000 112810 148230 128800 130410 119500 110530 138040 98017 95678 119050 TRUE FALSE 121446.8203 140869.1137 133094.1277 119755.0858 114807.8296 114736.2966 119915.1822 110828.1584 103999.8995 115165.4082 1.054542524 1.223189462 1.155677992 1.039852918 0.996895086 0.996273954 1.041243061 0.962338953 0.903048069 1 16.81334792 -5.909594384 2.882385992 0.985762699 1.153460206 0.666265523 0.050770819 0.153484263 2.574176987 0.015384542 0.024414681 1.23E-06 5.909594384 0.167697507 ALSSGGSITSPPLS(ph)PALPK ddPTM_A459_MK2206_30min_R1 2 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JHW1;C9JW88;C9JRZ2;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JHT0 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ALSSGGS(0.001)IT(0.005)S(0.133)PPLS(0.862)PALPK;ALSSGGSITSPPLS(1)PALPK 191.4 2.95E-15 20980000 10034.4 10770 9707.8 8950.3 9230.6 7822.1 7945 7832.9 7203.6 6846.9 TRUE FALSE 9180.921587 10068.87104 9048.861583 9639.653657 8862.925656 8264.980542 7415.003546 7764.417781 7952.439998 7695.145663 1.193079636 1.308470493 1.175918167 1.252692812 1.151755411 1.074051214 0.963594956 1.009002054 1.033435928 1 12.90973292 -6.719331521 1.86016635 1.002151126 1.234944461 0.879186176 0.038587597 0.103147732 0.736298572 0.014919565 0.014080536 1.91E-07 6.719331521 0.232793335 ALSSGGSITSPPLS(ph)PALPK ddPTM_A459_MK2206_30min_R2 2 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JHW1;C9JW88;C9JRZ2;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JHT0 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ALSSGGSITSPPLS(0.999)PALPK;ALSSGGSITS(0.001)PPLS(0.999)PALPK 145.8 4.92E-05 17841100 54062 66522 54332 61310 52591 47365 50850 39678 41511 44375 TRUE FALSE 58201.02829 63218.61421 56143.40176 56300.77688 50526.01309 49167.50827 44173.33392 44864.05083 45121.55175 42927.04738 1.35581252 1.472698871 1.307879418 1.311545525 1.177020461 1.145373634 1.029032664 1.045123147 1.051121717 1 15.38959932 -6.377668144 0.797580251 1.019745411 1.424501193 0.936919887 0.038951801 0.140286967 0.195895462 0.021282385 0.031612464 4.19E-07 6.377668144 0.404755782 ALSSLHGDDQDS(ph)EDEVLTIPEVK ddPTM_A459_MK2206_30min_R1 5 ALSSLHGDDQDSEDEVLTIPEVK 23 0 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor 1 ALSSLHGDDQDS(1)EDEVLTIPEVK;ALSSLHGDDQDS(1)EDEVLTIPEVK;ALSSLHGDDQDS(1)EDEVLTIPEVK;ALSSLHGDDQDS(0.802)EDEVLT(0.198)IPEVK;ALSSLHGDDQDS(0.966)EDEVLT(0.034)IPEVK 150.65 4.81E-08 42635400 31781.8 18367.19 24283.72 18850.38 45777.8 41485.9 42799.1 40040.2 25868.32 25501.96 TRUE FALSE 29078.59102 17171.48259 22635.40874 20302.23953 43954.37329 43834.79581 39944.05013 39690.13275 28557.42443 28661.33533 1.014558138 0.599116628 0.789754158 0.708349395 1.533577301 1.529405218 1.393656285 1.384797055 0.996374527 1 14.80681821 -6.253136876 24.99769861 1.341064488 0.766014665 0.619987556 0.201461096 382.6426783 1152084.107 0.05952514 0.075530089 5.58E-07 6.253136876 -0.575049823 ALSSLHGDDQDS(ph)EDEVLTIPEVK ddPTM_A459_MK2206_30min_R2 13 ALSSLHGDDQDSEDEVLTIPEVK 23 0 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor 1 ALSSLHGDDQDS(1)EDEVLTIPEVK;ALSSLHGDDQDS(0.998)EDEVLT(0.002)IPEVK;ALSSLHGDDQDS(1)EDEVLTIPEVK;ALSSLHGDDQDS(1)EDEVLTIPEVK;ALSSLHGDDQDS(1)EDEVLTIPEVK;ALSS(0.001)LHGDDQDS(0.995)EDEVLT(0.003)IPEVK;ALSSLHGDDQDS(0.975)EDEVLT(0.025)IPEVK;ALSSLHGDDQDS(1)EDEVLTIPEVK;ALSSLHGDDQDS(0.999)EDEVLT(0.001)IPEVK;ALSSLHGDDQDS(1)EDEVLTIPEVK;ALSSLHGDDQDS(0.988)EDEVLT(0.012)IPEVK;ALSSLHGDDQDS(0.986)EDEVLT(0.014)IPEVK;ALSSLHGDDQDS(0.991)EDEVLT(0.009)IPEVK 137.09 3.08E-06 23401300 182409.3 255319.3 252652 329191.1 310327.8 359168.5 404601.5 220259.4 363089.9 287449.5 TRUE FALSE 196374.6963 242640.5148 261075.2916 302295.1341 298142.7713 372836.9089 351476.837 249048.0598 394670.8032 278070.0464 0.70620586 0.872587745 0.938883188 1.087118653 1.072185858 1.340802125 1.263986688 0.895630663 1.419321528 1 18.08508882 -5.376872908 0.978131741 1.178005282 0.677053088 0.523875111 0.147353253 0.736206176 1.025431909 0.052586743 0.319398888 4.20E-06 5.376872908 -0.500952195 ALSSLHGDDQDSEDEVLT(ph)IPEVK ddPTM_A459_MK2206_30min_R2 1 ALSSLHGDDQDSEDEVLTIPEVK 23 0 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor 1 ALSSLHGDDQDS(0.023)EDEVLT(0.977)IPEVK 81.665 0.00065115 3560300 14275 21427 21739 26195 26780 28917 33701 20122 32927 20948 TRUE FALSE 15367.90498 20362.96634 22463.76741 24054.78471 25728.48264 30017.4567 29276.01822 22752.01449 35790.93094 20264.46848 0.75836704 1.004860619 1.108529811 1.18704247 1.269635208 1.481285173 1.444697069 1.122754072 1.766191449 1 14.30666471 -5.05451793 0.730167073 1.374480492 0.559234672 0.479377243 0.197600447 1.735788362 0.907366527 0.081138031 1.092734642 8.82E-06 5.05451793 -0.81524582 ALST(ph)TSSSTTNGNR ddPTM_A459_MK2206_30min_R2 1 ALSTTSSSTTNGNR 14 0 C9JUH3;A0A0A0MT72;Q9BSQ5-3;Q9BSQ5-4;Q9BSQ5;Q9BSQ5-2 C9JUH3 CCM2 Cerebral cavernous malformations 2 protein 1 ALS(0.334)T(0.653)T(0.004)S(0.001)S(0.004)S(0.004)TTNGNR 107.46 0.012151 3852600 22108 24311 25529 29626 27206 23626 26319 19430 25193 24848 TRUE FALSE 23800.60548 23103.75109 26380.12412 27205.46103 26137.75574 24525.10399 22863.28369 21969.56771 27384.2416 24037.21179 0.990156665 0.961166016 1.09747022 1.131806021 1.087387171 1.02029737 0.951162052 0.913981534 1.139243679 1 14.55298194 -6.995045376 20.52102384 0.992757329 1.055104361 0.10370213 0.071560678 31.78395884 131631.5902 0.026743126 0.023431166 1.01E-07 6.995045376 0.062347031 ALSTGLDYS(ph)PPSAPR ddPTM_A459_MK2206_30min_R2 1 ALSTGLDYSPPSAPR 15 0 P54253 P54253 ATXN1 Ataxin-1 1 ALSTGLDYS(0.92)PPS(0.08)APR 108.06 0.004085 3764000 7023.1 10776 7891.7 7455.6 8525.2 11232 9349 9475 7897.7 5226.8 TRUE FALSE 7560.793936 10240.87951 8154.805339 6846.453631 8190.457812 11659.44163 8121.46507 10713.41503 8584.62767 5056.249944 1.495336271 2.025390284 1.612816896 1.354057593 1.619868065 2.305946454 1.606223023 2.118846013 1.697825022 1 12.30385207 ALSYASLDKEDLLS(ph)PINQNTLQR ddPTM_A459_MK2206_30min_R1 1 ALSYASLDKEDLLSPINQNTLQR 23 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 ALSYASLDKEDLLS(0.955)PINQNT(0.045)LQR 67.586 0.0019403 5810700 1943.1 1435.3 1727.1 1467 1384 1060.3 1212.7 1490.6 1433.3 1131.3 TRUE FALSE 1777.829141 1341.861709 1609.869264 1579.988594 1328.872349 1120.33327 1131.802996 1477.567841 1582.296664 1271.453985 1.398264634 1.055375755 1.266164001 1.24266282 1.045159609 0.881143386 0.890164339 1.162108782 1.244478119 1 10.31226354 -6.281006848 7.08472402 1.02967854 1.229391423 0.371631519 0.129076424 0.216556249 53.26457987 0.042221704 0.049364865 5.24E-07 6.281006848 0.199712882 ALT(ph)PLTSSYR ddPTM_A459_MK2206_30min_R1 1 ALTPLTSSYR 10 0 O95486-2;O95486 O95486-2 SEC24A Protein transport protein Sec24A 1 ALT(0.999)PLT(0.001)SSYR 152.69 0.0014592 8549500 3943.7 4255.1 4728.3 3745.2 4846.3 3781.2 4350 4299.9 3931.7 4312 TRUE FALSE 3608.267606 3978.092217 4407.35617 4033.655953 4653.261609 3995.288276 4059.819437 4262.306428 4340.414285 4846.203114 0.744555587 0.820867826 0.909445202 0.832333243 0.960187078 0.824416184 0.837732002 0.879514607 0.895631938 1 12.24263916 -14.17044285 0.019691697 2.075803445 1.82E-06 0.489586237 0.050529687 3133.550272 4.920355791 342.7495654 194.9984238 6.75E-15 14.17044285 -2.075801627 ALT(ph)TPTHYK ddPTM_A459_MK2206_30min_R1 2 ALTTPTHYK 9 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ALT(0.845)T(0.145)PT(0.01)HYK;ALT(0.996)T(0.004)PTHYK 117.31 0.017708 19216900 12514.5 10707.9 12174.5 9981.4 11072.6 9789.4 10746.7 10643.7 9145.6 9155.3 TRUE FALSE 11450.07606 10010.81376 11348.12886 10750.16916 10631.5549 10343.66737 10029.80725 10550.64325 10096.31785 10289.52768 1.112789276 0.972912856 1.102881416 1.04476799 1.033240322 1.00526163 0.974758761 1.025376828 0.981222672 1 13.32888914 -6.607431503 2.192948332 0.996571523 1.055270376 0.37406698 0.037443296 0.351977351 3.445453582 0.01319505 0.013443505 2.47E-07 6.607431503 0.058698853 ALT(ph)TPTHYK ddPTM_A459_MK2206_30min_R2 1 ALTTPTHYK 9 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ALT(0.929)T(0.071)PTHYK 89.679 0.040062 18566000 79365 91531 75929 83868 92272 73161 84670 70664 66461 68861 TRUE FALSE 85441.24542 86985.70364 78460.43496 77015.71612 88648.93765 75945.19312 73552.72729 79900.02743 72241.65765 66614.07121 1.282630589 1.305815754 1.177835757 1.156147864 1.330783963 1.14007734 1.104162018 1.199446693 1.084480446 1 16.02353934 -1.522878745 0.033534519 0.297001546 2.523171576 0.630391702 0.060455462 729.537407 1.87873786 37.72825457 101.2434172 0.03 1.522878745 2.22617003 ALTQPS(ph)PVSTPSSVQFFLQEDDSADR ddPTM_A459_MK2206_30min_R1 1 ALTQPSPVSTPSSVQFFLQEDDSADR 26 0 P04920-2;P04920-3;P04920;C9J9M9 P04920-2 SLC4A2 Anion exchange protein 2 1 ALT(0.007)QPS(0.991)PVS(0.002)TPSSVQFFLQEDDSADR 154.19 7.27E-12 7855500 2464.5 2376.4 1592.8 1961.7 2401.5 2141.7 2508.7 2525.7 2324.6 1950.8 TRUE FALSE 2254.881333 2221.695928 1484.685174 2112.790474 2305.84317 2262.961203 2341.3492 2503.618071 2566.250489 2192.479832 1.028461608 1.013325594 0.677171645 0.963653322 1.051705533 1.032146873 1.067899995 1.141911563 1.170478493 1 11.09834786 -6.243919543 3.253075359 1.08485425 0.905440438 0.374127481 0.100659785 0.273741312 6.023039866 0.033469026 0.042150137 5.70E-07 6.243919543 -0.179413813 ALTQTGGPHVK ddPTM_A459_MK2206_30min_R2 1 ALTQTGGPHVK 11 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 95.477 0.029764 5637200 38781 38942 46984 41978 44095 32514 40278 40455 31438 41860 FALSE TRUE 41750.10318 37008.19691 48550.42311 38548.26312 42363.60874 33751.34305 34989.45022 45742.6074 34172.42041 40494.11163 1.031016647 0.913915516 1.198950197 0.951947371 1.046167135 0.833487678 0.86406267 1.129611333 0.843886161 1 15.30542452 -6.695375944 24.99999861 0.937920954 1.027267148 0.162200435 0.106850864 115.1478669 43573.34322 0.034711109 0.034711098 2.02E-07 6.695375944 0.089346193 ALTVPELTQQVFDAK ddPTM_A459_MK2206_30min_R1 2 ALTVPELTQQVFDAK 15 0 P07437;Q5JP53;Q5ST81 P07437 TUBB Tubulin beta chain 0 ; 205.96 2.98E-05 19553900 9723.2 10452.2 10266.9 9403.1 9627.9 9582.7 10042.4 10149 8847 8764.8 FALSE TRUE 8896.190781 9771.75988 9570.011433 10127.32839 9244.400356 10125.26419 9372.489819 10060.26836 9766.677309 9850.649595 0.903107018 0.99199142 0.971510695 1.028087366 0.938455913 1.027877816 0.951459062 1.02127969 0.991475457 1 13.26600315 -4.760957988 24.84381454 0.990783843 0.903106915 0.453532116 0.029052524 9.164829558 472458.384 0.006539879 0.037523741 1.73E-05 4.760957988 -0.087676928 ALTVPELTQQVFDAK ddPTM_A459_MK2206_30min_R2 1 ALTVPELTQQVFDAK 15 0 P07437;Q5JP53;Q5ST81 P07437 TUBB Tubulin beta chain 0 143.17 0.0052421 2947400 17392 15635 9639.3 13864 14554 11172 16650 11206 16586 12934 FALSE TRUE 18723.54489 14858.58864 9960.669451 12731.26685 13982.53683 11597.15829 14463.835 12670.66268 18028.6203 12511.96464 1.496451231 1.187550402 0.79609156 1.0175274 1.117533276 0.926885475 1.15600031 1.012683702 1.440910426 1 13.61102072 -11.342897 13.23790781 0.999552847 1.107916867 0.025925479 0.204410531 0.002723955 3.70E-05 0.19982803 0.048274351 4.54E-12 11.342897 0.108364019 ALVADSHPESER ddPTM_A459_MK2206_30min_R2 1 ALVADSHPESER 12 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 0 152.96 0.0019086 0 41323 53068 49909 55046 54841 58524 49372 48923 58245 49155 FALSE TRUE 44486.72065 50432.72029 51572.94115 50548.56572 52687.66679 60751.17183 42889.39709 55317.40408 63311.04482 47551.07638 0.935556543 1.060601024 1.084579889 1.063037255 1.10802259 1.277598247 0.9019648 1.163326013 1.331432423 1 15.53719038 -3.371543484 0.621041128 1.132199273 3.45E-10 0.189405511 0.116712351 30.16935396 2.237459906 0.051886746 36.01376443 0.000425066 3.371543484 -1.132199272 ALVATPGKK ddPTM_A459_MK2206_30min_R2 2 ALVATPGKK 9 1 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 NCL Nucleolin 0 ; 93.143 0.040573 0 95120 95362 90451 88260 80766 66083 101299 86478 83837 90592 FALSE TRUE 102402.4603 90626.46175 93466.5912 81048.87567 77594.72102 68597.83487 87998.31962 97780.97152 91128.99072 87635.99046 1.16849778 1.03412378 1.066532034 0.924835507 0.885420711 0.78275871 1.004134479 1.115762725 1.039858056 1 16.41923586 -4.870828512 1.290551549 0.964994702 1.221893551 0.306614487 0.089263115 1.682046531 2.76065316 0.030699931 0.55104264 1.35E-05 4.870828512 0.256898849 ALVEFES(ph)NPEETREPGSPPSVQR ddPTM_A459_MK2206_30min_R2 1 ALVEFESNPEETREPGSPPSVQR 23 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 ALVEFES(0.815)NPEET(0.088)REPGS(0.065)PPS(0.032)VQR 58.564 0.0077212 3534200 6214.9 6956.6 5216.4 6760.2 7308.9 7056.7 6811 7023.1 7061.9 7146.5 TRUE FALSE 6690.717522 6611.14536 5390.312172 6207.870035 7021.915862 7325.247663 5916.707519 7941.043284 7676.131297 6913.31029 0.967802289 0.956292294 0.779700599 0.897959122 1.015709634 1.059586125 0.855842899 1.148660041 1.110340918 1 12.75516096 -6.859616717 0.887486343 1.065368964 0.899762424 0.31256047 0.089458102 0.729483385 1.228808641 0.061543113 0.051737484 1.38E-07 6.859616717 -0.16560654 ALVEFESNPEET(ph)REPGSPPSVQR ddPTM_A459_MK2206_30min_R1 1 ALVEFESNPEETREPGSPPSVQR 23 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 ALVEFESNPEET(0.672)REPGS(0.232)PPS(0.096)VQR 73.688 0.00066473 6447500 2312.4 2065.8 2024.5 1845.9 2893.6 1966.4 2290.9 1767.2 1920.2 1594.4 TRUE FALSE 2115.718237 1931.316045 1887.082581 1988.071538 2778.341785 2077.735869 2138.078241 1751.749557 2119.811662 1791.926309 1.18069489 1.077787649 1.053102782 1.109460544 1.550477701 1.159498501 1.193173084 0.977579015 1.182979261 1 10.80729559 -11.10879053 5.734797223 0.999308041 1.163980575 0.105169608 0.144337701 0.001350814 9.75E-05 0.147836211 0.035707859 7.78E-12 11.10879053 0.164672534 ALVEFESNPEET(ph)REPGSPPSVQR ddPTM_A459_MK2206_30min_R2 3 ALVEFESNPEETREPGSPPSVQR 23 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 ALVEFES(0.001)NPEET(0.476)REPGS(0.476)PPS(0.047)VQR;ALVEFES(0.008)NPEET(0.642)REPGS(0.267)PPS(0.083)VQR;ALVEFES(0.003)NPEET(0.699)REPGS(0.245)PPS(0.054)VQR 69.07 0.0040908 1212489000 74561.9 90798 84327.7 91797 91536 97146 100749 68557.7 78612.5 84164.6 TRUE FALSE 80270.41639 86289.10335 87139.14343 84296.89146 87941.83671 100842.9591 87520.53528 77518.42678 85450.07315 81418.31599 0.985901212 1.059824221 1.070264625 1.03535538 1.080123503 1.238578296 1.074948974 0.952100591 1.049519044 1 16.31306576 -7.667924514 8.503845758 1.000882093 1.081869431 0.231839545 0.064279629 0.392693629 31.55923751 0.032399218 0.018621553 2.15E-08 7.667924514 0.080987338 ALVEFESNPEETREPGS(ph)PPSVQR ddPTM_A459_MK2206_30min_R1 5 ALVEFESNPEETREPGSPPSVQR 23 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 ALVEFESNPEET(0.001)REPGS(0.947)PPS(0.052)VQR;ALVEFESNPEET(0.006)REPGS(0.52)PPS(0.473)VQR;ALVEFESNPEET(0.253)REPGS(0.745)PPS(0.002)VQR;ALVEFES(0.001)NPEET(0.037)REPGS(0.946)PPS(0.015)VQR;ALVEFES(0.02)NPEET(0.138)REPGS(0.811)PPS(0.031)VQR 109.37 9.30E-06 3302531200 11368.72 11506.99 10898.25 9913.81 12566.6 11344.04 11624.25 11072.72 9370.1 9170.4 TRUE FALSE 10401.75066 10757.88286 10158.50715 10677.37336 12066.04571 11986.32974 10848.81749 10975.91238 10344.15543 10306.49838 1.009241963 1.043796104 0.985640979 1.035984576 1.170722127 1.162987592 1.052619142 1.064950672 1.003653718 1 13.33126664 -6.014985393 24.26729692 1.084184723 1.015121552 0.204507499 0.05510278 704.7516786 1141275.744 0.016993597 0.022769704 9.66E-07 6.014985393 -0.069063171 ALVEFESNPEETREPGS(ph)PPSVQR ddPTM_A459_MK2206_30min_R2 4 ALVEFESNPEETREPGSPPSVQR 23 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 ALVEFES(0.002)NPEET(0.153)REPGS(0.83)PPS(0.015)VQR;ALVEFES(0.002)NPEET(0.359)REPGS(0.622)PPS(0.017)VQR;ALVEFESNPEET(0.007)REPGS(0.82)PPS(0.172)VQR;ALVEFES(0.005)NPEET(0.045)REPGS(0.744)PPS(0.206)VQR 78.456 0.00038647 1391170200 67686.9 84119.9 71055.1 98612.4 94305.2 96327.8 84409.7 63136.4 74852.9 84072.3 TRUE FALSE 72869.06111 79942.62809 73424.04157 90555.45147 90602.304 99993.62193 73326.605 71388.54426 81363.46994 81329.02774 0.89597851 0.9829532 0.902802402 1.113445642 1.114021728 1.229494864 0.901604348 0.877774471 1.000423492 1 16.31148275 ALVEFESNPEETREPGSPPSVQR ddPTM_A459_MK2206_30min_R1 1 ALVEFESNPEETREPGSPPSVQR 23 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 0 80.733 0.0044292 0 412.86 318.26 219.79 272.24 261.61 343.84 271.45 276.34 206.84 173.27 FALSE TRUE 377.744089 297.5412162 204.8712672 293.207972 251.1895197 363.3079237 253.3420658 273.9239885 228.3417582 194.7359957 1.939775374 1.527920994 1.052046215 1.505669103 1.289897735 1.865643392 1.300951398 1.406642811 1.172570882 1 7.605375772 -12.1293757 0.084937076 1.12E-14 1.931882813 0.322627898 0.245547559 182.486037 1.838064284 43.83283101 8.873566542 7.42E-13 12.1293757 1.931882813 ALVHQLS(ph)NESR ddPTM_A459_MK2206_30min_R2 1 ALVHQLSNESR 11 0 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7;Q9H4L5-2;Q9H4L5-6;Q9H4L5-4;Q9H4L5-8 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 ALVHQLS(0.962)NES(0.038)R 68.277 0.047903 3155200 13201 14544 15886 18145 18025 20206 18592 15790 17938 16199 TRUE FALSE 14211.67871 13821.76611 16415.63131 16662.49546 17317.24793 20974.95349 16150.84807 17853.80722 19498.21482 15670.42796 0.906910695 0.88202863 1.047554755 1.063308258 1.105090938 1.338505467 1.030657753 1.139331183 1.244268176 1 13.93575696 -5.549990146 1.322994943 1.151838522 0.876036805 0.50390794 0.093732041 0.406934368 1.312762249 0.030195372 0.103395246 2.82E-06 5.549990146 -0.275801716 ALVLDCHYPEDEVGQEDEAES(ph)DIFSIR ddPTM_A459_MK2206_30min_R1 2 ALVLDCHYPEDEVGQEDEAESDIFSIR 27 0 Q07021;I3L3Q7;I3L3B0 Q07021 C1QBP "Complement component 1 Q subcomponent-binding protein, mitochondrial" 1 ALVLDCHYPEDEVGQEDEAES(1)DIFSIR;ALVLDCHYPEDEVGQEDEAES(1)DIFSIR 198.03 4.91E-40 20659600 2826 2401.7 2887.3 3001.3 2976.9 2417.5 2686.7 2810.4 2320.2 2037.23 TRUE FALSE 2585.63386 2245.348893 2691.31812 3232.460646 2858.323769 2554.376761 2507.475145 2785.828969 2561.393093 2289.617433 1.129286414 0.98066553 1.175444457 1.411790721 1.248384874 1.115634745 1.095150268 1.216722466 1.118699157 1 11.16089085 -8.578491803 6.328573765 1.000004191 1.17141363 0.194274516 0.10623802 1.057241925 117.5250738 0.113378232 0.029364993 2.64E-09 8.578491803 0.171409439 ALVLDCHYPEDEVGQEDEAESDIFSIR ddPTM_A459_MK2206_30min_R1 2 ALVLDCHYPEDEVGQEDEAESDIFSIR 27 0 Q07021;I3L3Q7;I3L3B0 Q07021 C1QBP "Complement component 1 Q subcomponent-binding protein, mitochondrial" 0 ; 206.92 9.05E-42 20023900 3141.6 3324.8 3225.1 3092.1 3893.1 3202.3 3186.4 2761.8 2629 2750.9 FALSE TRUE 2874.390423 3108.354916 3006.189198 3330.254078 3738.029583 3383.611459 2973.84107 2737.653874 2902.293958 3091.70226 0.929711266 1.005386242 0.972341107 1.077158729 1.209052253 1.094416983 0.961878221 0.88548432 0.938736564 1 11.59418567 -7.41712357 5.33350128 0.932215214 1.050800583 0.30025761 0.075783791 0.295348117 12.22828687 0.036567168 0.024136962 3.83E-08 7.41712357 0.11858537 ALVVPEPEPDS(ph)DSNQER ddPTM_A459_MK2206_30min_R1 4 ALVVPEPEPDSDSNQER 17 0 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 RNF20 E3 ubiquitin-protein ligase BRE1A 1 ALVVPEPEPDS(0.995)DS(0.005)NQER;ALVVPEPEPDS(0.996)DS(0.004)NQER;ALVVPEPEPDS(0.632)DS(0.368)NQER;ALVVPEPEPDS(0.897)DS(0.103)NQER 260.07 3.37E-40 126762000 20101.7 21177.1 22636.7 19049.2 23100.1 19101.2 23192.7 20572.6 18486.6 17651.9 TRUE FALSE 18391.94486 19798.46694 21100.18387 20516.37268 22179.9741 20182.69344 21645.5573 20392.73593 20408.34822 19838.75064 0.927071729 0.997969444 1.063584308 1.034156488 1.118012646 1.017336918 1.091074619 1.027924404 1.028711364 1 14.27603355 -4.893583607 2.374230039 1.05115712 0.912897764 0.547735724 0.033829532 0.302697023 2.542668925 0.008488354 0.079463228 1.28E-05 4.893583607 -0.138259357 ALVVPEPEPDS(ph)DSNQER ddPTM_A459_MK2206_30min_R2 4 ALVVPEPEPDSDSNQER 17 0 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 RNF20 E3 ubiquitin-protein ligase BRE1A 1 ALVVPEPEPDS(0.838)DS(0.162)NQER;ALVVPEPEPDS(0.538)DS(0.462)NQER;ALVVPEPEPDS(0.706)DS(0.294)NQER;ALVVPEPEPDS(0.698)DS(0.302)NQER 258.13 4.38E-40 93241000 159007 188674 182171 198041 180642 184351 201886 149629 160023 168057 TRUE FALSE 171180.6982 179304.7235 188244.4902 181860.4168 173549.0874 191366.6065 175378.1257 169186.0241 173941.5113 162573.3139 1.052944632 1.102916089 1.157905229 1.11863634 1.067512763 1.177109588 1.078763307 1.04067525 1.06992659 1 17.31073094 -8.078374203 1.080681454 1.012351552 1.112888605 0.432237347 0.038431478 0.46581999 1.023196803 0.035956272 0.012605918 8.35E-09 8.078374203 0.100537053 ALVVPEPEPDS(ph)DSNQERK ddPTM_A459_MK2206_30min_R1 3 ALVVPEPEPDSDSNQERK 18 1 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 RNF20 E3 ubiquitin-protein ligase BRE1A 1 ALVVPEPEPDS(0.913)DS(0.087)NQERK;ALVVPEPEPDS(0.5)DS(0.5)NQERK;ALVVPEPEPDS(0.66)DS(0.34)NQERK 131.54 0.00027099 24327700 7504.7 8299.9 9380.8 7497.4 6973.6 6292.5 8220.9 8587 9757.1 10651.3 TRUE FALSE 6866.385856 7759.575001 8744.057432 8074.851047 6695.826745 6648.775912 7672.498761 8511.924764 10771.38546 11970.86346 0.573591528 0.648205121 0.730445006 0.674542073 0.559343674 0.555413228 0.640931106 0.711053534 0.899800211 1 13.5472396 -8.279973535 1.918241094 0.998133079 0.627126605 0.865278881 0.051182977 0.124180608 0.854794682 0.054255388 0.015871316 5.25E-09 8.279973535 -0.371006474 ALVVPEPEPDSDS(ph)NQERK ddPTM_A459_MK2206_30min_R2 1 ALVVPEPEPDSDSNQERK 18 1 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 RNF20 E3 ubiquitin-protein ligase BRE1A 1 ALVVPEPEPDS(0.132)DS(0.868)NQERK 157.62 1.05E-05 14720000 96118 90351 104220 93780 77454 74475 102410 79433 73080 94467 TRUE FALSE 103476.868 85864.30072 107694.6428 86117.87401 74412.76678 77309.19831 88963.44398 89815.16583 79436.3663 91384.54953 1.132323445 0.939593193 1.17847758 0.942367987 0.814281705 0.845976685 0.973506402 0.982826597 0.869253793 1 16.47966265 -5.932238813 8.859759677 0.909869571 1.068456356 0.467232978 0.080723677 0.274134681 32.81630463 0.022621823 0.033612873 1.17E-06 5.932238813 0.158586785 ALYDYAGQEADELS(ph)FR ddPTM_A459_MK2206_30min_R1 1 ALYDYAGQEADELSFR 16 0 A0A0C4DGG1;Q9UKS6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 ALYDYAGQEADELS(1)FR 214.63 1.09E-08 3480800 1238.1 1542.8 1375.3 1333 1633 1523.7 1683.2 1379 1486 1181.5 TRUE FALSE 1132.793093 1442.36344 1281.948468 1435.667891 1567.954152 1609.970577 1570.916799 1366.943548 1640.475018 1327.87314 0.853088341 1.086220812 0.965414865 1.081178501 1.180801166 1.212443063 1.183032288 1.029423299 1.235415469 1 10.37490161 -5.929623866 3.368588969 1.147017952 0.979529221 0.427270378 0.088261007 0.228809585 5.242868149 0.024977359 0.038394134 1.18E-06 5.929623866 -0.16748873 ALYEAGER ddPTM_A459_MK2206_30min_R1 3 ALYEAGER 8 0 P04083 P04083 ANXA1 Annexin A1 0 ;; 147.69 0.02317 123902000 11954.9 13065 12885.6 10247.1 12956.5 10545 12554.6 10893.2 11384.5 9429.2 FALSE TRUE 10938.07298 12214.46613 12010.96137 11036.33342 12440.41517 11142.04879 11717.10554 10797.9619 12567.95951 10597.36048 1.032150694 1.152595134 1.133391791 1.041422856 1.173916391 1.051398488 1.105662637 1.018929376 1.185951873 1 13.37141735 ALYEAGERR ddPTM_A459_MK2206_30min_R2 3 ALYEAGERR 9 1 P04083 P04083 ANXA1 Annexin A1 0 ;; 104.06 0.019872 30172000 44918 107492 73111 99788 125723 124804 96476 75079 108850 61841 FALSE TRUE 48356.95662 102154.1036 75548.48425 91635.00119 120786.4833 129553.5037 83808.58531 84892.08308 118317.5762 59823.13323 0.808332062 1.707602027 1.262864049 1.531765326 2.019059798 2.165608798 1.400939416 1.419051101 1.977789692 1 15.86841585 -5.949403575 4.903776503 1.703308763 1.310277483 0.173300748 0.383309952 0.353208934 18.46767337 0.109018683 0.162557461 1.12E-06 5.949403575 -0.39303128 ALYESVFGSGEICGPTS(ph)PKR ddPTM_A459_MK2206_30min_R2 1 ALYESVFGSGEICGPTSPKR 20 1 A0A2U3U043 A0A2U3U043 1 ALYESVFGSGEICGPT(0.199)S(0.801)PKR 70.334 0.0056855 4370900 10028 13254 8325.9 10694 11721 9361.5 11348 9235.2 10073 12176 TRUE FALSE 10795.75139 12595.82563 8603.48135 9820.265992 11260.77465 9717.758442 9857.993969 10442.27235 10949.13133 11778.69812 0.91654878 1.06937333 0.730427189 0.83373102 0.956028802 0.825028229 0.836934088 0.886538754 0.929570588 1 13.52389247 -8.564329806 2.441839127 0.999528381 0.880488253 0.156832684 0.085092599 0.628644787 8.931301453 0.083812225 0.022784769 2.73E-09 8.564329806 -0.119040128 AMADELS(ph)EK ddPTM_A459_MK2206_30min_R1 4 AMADELSEK 9 0 Q03135;E9PCT5 Q03135 CAV1 Caveolin-1;Caveolin 1 AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK 143.5 0.0020277 280458000 23739.1 28077.3 19456.2 20248.3 19718.5 18851.3 27157.7 25235.4 36256 33347.2 TRUE FALSE 21719.96489 26249.46267 18135.56735 21807.82757 18933.07039 19918.64432 25346.05939 25014.76956 40024.94094 37478.50289 0.579531283 0.700387172 0.483892524 0.581875632 0.50517147 0.531468516 0.6762826 0.667443137 1.067943964 1 15.1937757 -8.156755957 2.746625556 1.04432193 0.577333685 0.870888442 0.068581484 0.09291713 1.256807123 0.060478518 0.018733348 6.97E-09 8.156755957 -0.466988245 AMADELS(ph)EK ddPTM_A459_MK2206_30min_R2 4 AMADELSEK 9 0 Q03135;E9PCT5 Q03135 CAV1 Caveolin-1;Caveolin 1 AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK 120.63 0.0065183 184671800 976910 502999 647832 619981 541015 523719 1057218 486218.4 683647 929153 TRUE FALSE 1051702.981 478020.8011 669430.3955 569326.5691 519772.0327 543649.4935 918404.0067 549768.8143 743109.3803 898834.8137 1.170073705 0.531822749 0.744775776 0.633405116 0.578273143 0.604838047 1.021771735 0.611646107 0.826747439 1 19.77769648 -9.113846481 0.756856007 1.004047681 0.718361888 0.132940347 0.196351268 4.010408259 3.453298488 0.218865159 0.067050165 7.69E-10 9.113846481 -0.285685792 AMEVDERPTEQYSDIGGLDK ddPTM_A459_MK2206_30min_R1 1 AMEVDERPTEQYSDIGGLDK 20 1 E9PN50;R4GNH3;E9PMD8;E9PM69;P17980 E9PN50;E9PM69 PSMC3 26S protease regulatory subunit 6A 0 124.91 0.00065112 5586300 1182 1656 1161.3 1247.6 1353.5 1253.4 1128.4 1227.4 1080.2 820.01 FALSE TRUE 1081.464693 1548.194099 1082.474192 1343.690368 1299.587229 1324.366425 1053.126495 1216.668971 1192.490656 921.5990296 1.173465529 1.67989988 1.174560906 1.457998897 1.410143877 1.437031054 1.142716584 1.320171715 1.293936536 1 9.847995387 -9.406116815 0.347920391 0.928798878 1.407803357 0.339614652 0.151228921 4.673962133 0.861833849 0.643148795 0.132544397 3.93E-10 9.406116815 0.47900448 AMFPNRRIVT(ph)TVFNDEGIQFLVT(ph)RY(ph)IK ddPTM_A459_MK2206_30min_R1 1 AMFPNRRIVTTVFNDEGIQFLVTRYIK 27 3 B7ZBX6;A0A5S8K7B6;Q6DHV5-1;Q6DHV5-2;Q6DHV5 B7ZBX6 CC2D2B Protein CC2D2B 3 AMFPNRRIVT(0.504)T(0.504)VFNDEGIQFLVT(0.996)RY(0.995)IK 44.632 0.029672 11876000 1155.9 2074.6 2205.1 1410.3 796.94 723.13 975.19 1121 2082.7 2313.6 TRUE FALSE 1057.584635 1939.543163 2055.423956 1518.92155 765.1961923 764.0729957 910.1368544 1111.199215 2299.204118 2600.226235 0.40672793 0.745913235 0.790478893 0.584149767 0.294280621 0.29384866 0.35002218 0.427347129 0.884232336 1 11.34442144 -8.359139219 4.261944462 0.987711819 0.491418773 0.55018127 0.165712781 0.197643503 5.854985357 0.183811404 0.048606266 4.37E-09 8.359139219 -0.496293047 AMGDS(ph)DDEYDRR ddPTM_A459_MK2206_30min_R2 1 AMGDSDDEYDRR 12 1 C9JUL9 C9JUL9 SRRT 1 AMGDS(1)DDEYDRR 104.81 0.0049225 10036000 32512 36039 32472 36724 35446 40526 40238 28744 29142 30992 TRUE FALSE 35001.14372 34249.35567 33554.60027 33723.53173 34054.21194 42068.24533 34954.70227 32500.93949 31676.71848 29980.73358 1.167454546 1.142378841 1.119205445 1.124840112 1.13586987 1.403175984 1.165905503 1.084060849 1.05656916 1 14.87174806 -7.90461201 2.938982007 1.03558696 1.180920767 0.388159798 0.07863418 0.316082331 5.340111873 0.058148504 0.023417635 1.25E-08 7.90461201 0.145333807 AMGIMNS(ph)FVNDIFER ddPTM_A459_MK2206_30min_R1 1 AMGIMNSFVNDIFER 15 0 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880;Q16778;P33778;P23527;P06899;Q8N257 U3KQK0;Q16778 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 1 AMGIMNS(1)FVNDIFER 138.98 0.00039539 4616200 1395.9 1203.5 1048.4 806.13 1330.4 1171.7 922.94 860.46 934.69 588.72 TRUE FALSE 1277.171375 1125.151931 977.237529 868.2182723 1277.407351 1238.040641 861.3723566 852.9370889 1031.85437 661.6550782 1.930267623 1.700511291 1.476959161 1.312191655 1.930624268 1.871126939 1.301845002 1.289096263 1.559504951 1 9.369935524 -11.80552164 0.128978907 4.77E-12 1.931734665 0.460656193 0.221266548 61.83549063 1.039992764 20.31682058 2.297805678 1.56E-12 11.80552164 1.931734665 AMGT(ph)LGVSLS(ph)S(ph)CSVPGS(ph)K ddPTM_A459_MK2206_30min_R1 1 AMGTLGVSLSSCSVPGSK 18 0 H0YCY6;Q3LXA3-2;Q3LXA3 H0YCY6 TKFC;DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) 4 AMGT(0.999)LGVS(0.003)LS(0.847)S(0.969)CS(0.45)VPGS(0.732)K 75.548 0.02065 7940500 0 240.58 217.65 156.5 115 104.31 138.8 221.93 139.41 175.05 TRUE FALSE 0 224.9181983 202.8765244 168.5536571 110.4193065 110.2159421 129.5409053 219.9896894 153.9021684 196.7365156 0 1.143245816 1.0312093 0.856748208 0.561254763 0.560221074 0.658448712 1.118194499 0.782275563 1 7.620120946 -7.746672522 24.91414555 0.962676309 0.714848546 0.146647902 0.303900882 486.3553324 820565.3763 0.145204397 0.083377646 1.79E-08 7.746672522 -0.247827763 AMIDS(ph)RTPEEMK ddPTM_A459_MK2206_30min_R1 1 AMIDSRTPEEMK 12 1 Q13576;E7EWC2;F5H7S7;Q13576-3;Q13576-2 Q13576 IQGAP2 Ras GTPase-activating-like protein IQGAP2 1 AMIDS(0.5)RT(0.5)PEEMK 95.358 0.016588 34304000 3537 1618.4 1758 3468.7 2005.8 3672.5 2223.7 1966.4 1439 1223.8 TRUE FALSE 3236.159576 1513.041866 1638.671858 3735.859875 1925.904739 3880.433776 2075.36103 1949.207972 1588.5892 1375.413583 2.352862889 1.100063199 1.191402992 2.716172009 1.400236818 2.821285047 1.508899618 1.417179528 1.154990193 1 10.42564978 -9.539397668 10.5043104 1.000001743 1.739544591 0.11427366 0.618342015 391372059.5 0 0.593095331 0.148273833 2.89E-10 9.539397668 0.739542848 AMKPPGGESSNLFGS(ph)PEEATPSSRPNR ddPTM_A459_MK2206_30min_R1 3 AMKPPGGESSNLFGSPEEATPSSRPNR 27 2 A6NGP5;Q9H910;Q9H910-3;H3BMV3;H3BMM8;B4E1P3 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 AMKPPGGESSNLFGS(0.958)PEEAT(0.023)PS(0.009)S(0.009)RPNR;AMKPPGGESSNLFGS(0.999)PEEAT(0.001)PSSRPNR;AMKPPGGESSNLFGS(0.968)PEEAT(0.015)PS(0.005)S(0.012)RPNR 99.446 1.66E-06 85310000 6650.3 6302.5 6322.8 6305.8 6536.9 5769.5 6416.3 7196.8 5485.4 5384.7 TRUE FALSE 6084.657063 5892.206104 5893.625952 6791.473809 6276.521431 6096.164104 5988.280334 7133.879136 6055.62696 6051.797288 1.005429755 0.973629126 0.973863742 1.122224272 1.037133455 1.00733118 0.989504448 1.178803386 1.000632816 1 12.56314795 -5.706748272 24.99975919 1.050819672 0.983239455 0.203295695 0.057524456 139.5620928 63793.51748 0.01547668 0.026806381 1.96E-06 5.706748272 -0.067580217 AMKPPGGESSNLFGS(ph)PEEATPSSRPNR ddPTM_A459_MK2206_30min_R2 5 AMKPPGGESSNLFGSPEEATPSSRPNR 27 2 A6NGP5;Q9H910;Q9H910-3;H3BMV3;H3BMM8;B4E1P3 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 AMKPPGGES(0.003)S(0.003)NLFGS(0.974)PEEAT(0.017)PS(0.001)S(0.001)RPNR;AMKPPGGES(0.001)S(0.003)NLFGS(0.976)PEEAT(0.012)PS(0.004)S(0.004)RPNR;AMKPPGGES(0.001)S(0.003)NLFGS(0.985)PEEAT(0.006)PS(0.003)S(0.003)RPNR;AMKPPGGES(0.007)S(0.028)NLFGS(0.955)PEEAT(0.003)PS(0.003)S(0.003)RPNR;AMKPPGGESSNLFGS(0.996)PEEAT(0.003)PSSRPNR 86.761 5.90E-05 62401200 121947.9 118391.3 101015 123390 116675.2 101021.3 137895 107678.2 106520.2 140868 TRUE FALSE 131284.325 112512.1602 104382.7897 113308.6423 112093.9454 104865.7364 119789.2209 121752.1105 115785.1345 136271.4887 0.963402736 0.825647105 0.765991409 0.831491924 0.822578123 0.769535413 0.879048303 0.89345256 0.849665147 1 17.05612422 -9.06637209 0.679229182 1.002263851 0.830330177 0.424609672 0.054854631 1.788044191 1.341176266 0.06811497 0.021425927 8.58E-10 9.06637209 -0.171933674 AMLDQLMGTS(ph)R ddPTM_A459_MK2206_30min_R2 1 AMLDQLMGTSR 11 0 Q9Y383;V9GZ75;F8WEU3 Q9Y383 LUC7L2;C7orf55-LUC7L2 Putative RNA-binding protein Luc7-like 2 1 AMLDQLMGT(0.059)S(0.941)R 89.663 0.028919 13500000 80958 102410 96914 99231 93159 89262 95724 78397 69821 86492 TRUE FALSE 87156.20673 97324.46832 100145.0644 91123.50988 89501.10957 92658.92796 83155.32381 88643.75708 75893.90437 83669.77312 1.041668974 1.163197469 1.196908521 1.089085179 1.069694661 1.107436109 0.993851432 1.0594478 0.90706478 1 16.3524189 -7.279400188 0.882357456 0.969071268 1.129590016 0.556243046 0.053377153 0.447994901 0.67623197 0.041512391 0.02393118 5.26E-08 7.279400188 0.160518748 AMLDS(ph)GIYPPGSPGK ddPTM_A459_MK2206_30min_R1 2 AMLDSGIYPPGSPGK 15 0 O95295 O95295 SNAPIN SNARE-associated protein Snapin 1 AMLDS(0.989)GIYPPGS(0.011)PGK;AMLDS(0.792)GIYPPGS(0.208)PGK 227.47 1.04E-13 175227000 15319.2 16816.5 16300.5 14519.5 12818.5 10670 14705.9 14707.2 14686.2 13142.6 TRUE FALSE 14016.2216 15721.74279 15194.06748 15637.79441 12307.912 11274.12618 13724.89624 14578.6165 16212.88305 14770.80451 0.948913892 1.064379586 1.028655377 1.058696186 0.83325942 0.763270963 0.92919084 0.986988657 1.097630331 1 13.85046079 -6.237185347 24.91311787 0.925523542 1.028212154 0.186737437 0.090732159 1273.801812 1308416.233 0.029349595 0.037871573 5.79E-07 6.237185347 0.102688612 AMLDSGIYPPGS(ph)PGK ddPTM_A459_MK2206_30min_R1 2 AMLDSGIYPPGSPGK 15 0 O95295 O95295 SNAPIN SNARE-associated protein Snapin 1 AMLDSGIYPPGS(0.999)PGK;AMLDS(0.002)GIYPPGS(0.998)PGK 115.56 0.008953 15770300 8085.9 8497.1 8488 7877.3 6633.3 5844.5 7330.7 7869.3 8410.4 7980.3 TRUE FALSE 7398.151744 7943.937246 7911.858209 8484.011011 6369.081615 6175.410539 6841.682379 7800.49954 9284.691177 8968.959812 0.824861734 0.885714443 0.88213777 0.945930318 0.710124892 0.688531409 0.762817821 0.869721763 1.035202674 1 13.13072496 -8.147006984 3.880150268 1.01729499 0.815898303 0.525843985 0.07589072 0.212913273 5.4008124 0.066978707 0.022606042 7.13E-09 8.147006984 -0.201396687 AMLDSGIYPPGS(ph)PGK ddPTM_A459_MK2206_30min_R2 6 AMLDSGIYPPGSPGK 15 0 O95295 O95295 SNAPIN SNARE-associated protein Snapin 1 AMLDSGIYPPGS(1)PGK;AMLDS(0.001)GIYPPGS(0.999)PGK;AMLDSGIYPPGS(1)PGK;AMLDS(0.002)GIYPPGS(0.998)PGK;AMLDS(0.002)GIY(0.001)PPGS(0.997)PGK;AMLDSGIYPPGS(1)PGK 199.65 2.14E-05 128368000 756814 787758 752221 722418 794431 596145 944199 708067 650655 844180 TRUE FALSE 814756.2617 748639.0832 777299.6727 663394.1385 763237.6472 618831.7157 820224.5371 800613.7881 707247.7958 816634.4757 0.997700055 0.916737054 0.951833036 0.812351374 0.934613551 0.757782991 1.004396167 0.980382058 0.866051847 1 19.63933095 -10.33367912 7.463372123 0.999999995 0.912460027 0.103015726 0.076479586 1.59E-10 0 0.073334595 0.017786252 4.64E-11 10.33367912 -0.087539967 AMLPGS(ph)PLFTR ddPTM_A459_MK2206_30min_R2 1 AMLPGSPLFTR 11 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 AMLPGS(1)PLFTR 142.89 0.00088397 6488100 69256 81182 75434 76496 66701 84777 63195 57295 71882 65643 TRUE FALSE 74558.29261 77150.61993 77948.93191 70246.0321 64081.98359 88003.24814 54897.42059 64783.65322 78134.16643 63501.07429 1.174126477 1.214949838 1.227521468 1.106218011 1.009148023 1.385854478 0.864511683 1.020197752 1.230438497 1 15.95449338 -6.284009313 0.483524382 1.046936447 1.230022433 0.129842194 0.134658177 2.925263441 1.314436872 0.116131918 0.258663286 5.20E-07 6.284009313 0.183085987 AMLSEQNRAS(ph)PLPSGLLTPPQSGK ddPTM_A459_MK2206_30min_R1 1 AMLSEQNRASPLPSGLLTPPQSGK 24 1 I3L413;C9J2U0;P24864-2;P24864-3;P24864 I3L413 CCNE1 G1/S-specific cyclin-E1 1 AMLS(0.001)EQNRAS(0.931)PLPS(0.055)GLLT(0.013)PPQS(0.001)GK 79.873 0.00014807 12119000 1462.9 1624.6 1623.9 1586.2 1540.1 1434 1585.1 1604 1421.5 1359 TRUE FALSE 1338.472673 1518.838245 1513.674192 1708.369399 1478.754556 1515.191841 1479.360871 1589.976397 1569.270012 1527.36318 0.876329016 0.994418528 0.991037503 1.118508958 0.96817481 0.992031143 0.968571778 1.040994321 1.027437372 1 10.57682743 -4.686235419 2.453824556 1.014187633 0.820942497 0.491993595 0.041496967 0.70088009 4.125149637 0.01100602 0.318085788 2.06E-05 4.686235419 -0.193245136 AMLSEQNRASPLPS(ph)GLLTPPQSGK ddPTM_A459_MK2206_30min_R1 1 AMLSEQNRASPLPSGLLTPPQSGK 24 1 I3L413;C9J2U0;P24864-2;P24864-3;P24864 I3L413 CCNE1 G1/S-specific cyclin-E1 1 AMLS(0.013)EQNRAS(0.322)PLPS(0.574)GLLT(0.09)PPQSGK 73.404 0.00036417 10746000 2335.1 2553.6 2404.2 2390.8 2894.9 2748.5 2730.9 2485.7 2486.4 2479.1 TRUE FALSE 2136.487483 2387.360176 2241.009602 2574.93983 2779.590003 2904.117695 2548.726644 2463.967787 2744.870178 2786.229624 0.766802371 0.856842579 0.804316192 0.92416641 0.997616987 1.042310967 0.914758289 0.88433766 0.985155765 1 11.44409845 -5.865651881 3.784337709 0.965482582 0.813368211 0.700919939 0.046959078 0.140773539 3.811466493 0.014547544 0.022808103 1.36E-06 5.865651881 -0.152114371 AMQVAKVS(ph)T(ph)AS(ph)VGRFQERLPK ddPTM_A459_MK2206_30min_R1 1 AMQVAKVSTASVGRFQERLPK 21 3 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog 3 AMQVAKVS(1)T(1)AS(1)VGRFQERLPK 47.397 0.041512 6586100 1985.1 798.65 1331.9 2280.1 1162.7 1906.9 1146.6 1356.8 847.54 674.56 TRUE FALSE 1816.256821 746.6577398 1241.494339 2455.713697 1116.387197 2014.86703 1070.112406 1344.937641 935.644816 758.1295855 2.395707615 0.984868226 1.637575373 3.239174073 1.472554585 2.657681574 1.411516483 1.774020783 1.234148929 1 9.566300656 -8.14700766 1.208610079 1.013104802 2.002637014 0.243254463 0.619277561 0.69493654 1.914274283 0.576009271 0.191133096 7.13E-09 8.14700766 0.989532212 AMS(ph)LNTLNVDAPR ddPTM_A459_MK2206_30min_R1 3 AMSLNTLNVDAPR 13 0 Q6P597;Q6P597-3;Q6P597-2 Q6P597 KLC3 Kinesin light chain 3 1 AMS(0.992)LNT(0.008)LNVDAPR;AMS(0.997)LNT(0.003)LNVDAPR;AMS(0.989)LNT(0.011)LNVDAPR 135.86 0.001125 17831800 3790.6 3876.74 3774.5 3686.43 4265.6 3515.29 4161.8 3516.9 3207.04 3145.97 TRUE FALSE 3468.189565 3624.363521 3518.297456 3970.359477 4095.692119 3714.322682 3884.173916 3486.152114 3540.423285 3535.716514 0.980901481 1.025071865 0.995073401 1.122929245 1.158376839 1.050514844 1.098553546 0.985981795 1.001331207 1 11.78778689 -10.62825547 18.33135061 0.999999686 1.049785418 0.051259465 0.058556684 0 0 0.061647138 0.014951627 2.35E-11 10.62825547 0.049785731 AMS(ph)PVTITTFSR ddPTM_A459_MK2206_30min_R1 2 AMSPVTITTFSR 12 0 A0A075B6G6;Q7Z7B0-3;Q7Z7B0-2;Q7Z7B0 A0A075B6G6 FILIP1 Filamin-A-interacting protein 1 1 AMS(0.991)PVT(0.009)ITTFSR;AMS(0.998)PVT(0.002)ITTFSR 148.13 0.00061112 47436000 4135.8 3300.7 3979.4 3865.6 4464.3 3686.9 4394.5 4072.7 3810.8 3006.9 TRUE FALSE 3784.028492 3085.82383 3709.289415 4163.329182 4286.477478 3895.649092 4101.350923 4037.092813 4206.946297 3379.417473 1.119728037 0.913123003 1.097612072 1.231966519 1.268407207 1.152757575 1.213626596 1.194612044 1.244873216 1 11.72255887 -5.549322172 5.062293779 1.196739541 1.012882855 0.395116699 0.084361531 0.145181664 9.837384674 0.021341341 0.039453264 2.82E-06 5.549322172 -0.183856686 AMS(ph)PVTITTFSR ddPTM_A459_MK2206_30min_R2 2 AMSPVTITTFSR 12 0 A0A075B6G6;Q7Z7B0-3;Q7Z7B0-2;Q7Z7B0 A0A075B6G6 FILIP1 Filamin-A-interacting protein 1 1 AMS(0.986)PVT(0.014)ITTFSR;AMS(0.999)PVT(0.001)ITTFSR 140.01 0.0011107 30094000 53970 80698 69900 73785 64891 73007 70903 64591 65659 64824 TRUE FALSE 58101.9847 76690.65467 72230.43111 67756.52947 62343.05329 75785.33254 61593.35093 73033.26547 71369.90114 62708.79819 0.926536409 1.222964829 1.151838868 1.080494786 0.994167566 1.208527906 0.982212269 1.164641447 1.138116232 1 15.93638025 AMS(ph)TTSISSPQPGK ddPTM_A459_MK2206_30min_R1 5 AMSTTSISSPQPGK 14 0 H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3;Q9UJU6-6 H0Y5J4;B4DDD6 DBNL Drebrin-like protein 1 AMS(0.819)T(0.133)T(0.047)S(0.001)ISSPQPGK;AMS(0.651)T(0.205)T(0.072)S(0.072)ISSPQPGK;AMS(0.971)T(0.027)T(0.001)S(0.001)ISSPQPGK;AMS(0.955)T(0.044)TSISSPQPGK;AMS(0.947)T(0.052)T(0.001)SISSPQPGK 218.68 1.01E-08 60092300 22440.1 20313.4 19554.9 16569.8 17326.9 12544.2 12953.8 12510.8 11013.1 10042.1 TRUE FALSE 20531.45166 18990.99397 18227.56787 17846.00887 16636.73288 13254.44176 12089.67564 12401.41939 12157.95116 11286.19116 1.819165683 1.6826752 1.615032708 1.58122511 1.474078601 1.174394583 1.071191819 1.098813516 1.077241293 1 13.46227107 -6.561955588 0.958843177 1.036508817 1.735766065 0.969040985 0.050922001 0.09052016 0.180759302 0.028814881 0.032613574 2.74E-07 6.561955588 0.699257248 AMS(ph)TTSISSPQPGK ddPTM_A459_MK2206_30min_R2 2 AMSTTSISSPQPGK 14 0 H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3;Q9UJU6-6 H0Y5J4;B4DDD6 DBNL Drebrin-like protein 1 AMS(0.456)T(0.456)T(0.088)SISSPQPGK;AMS(0.951)T(0.048)TSISSPQPGK 211.51 3.53E-06 80581000 416434 620901 431609 399535 310725 332024 325062 233310 232356 194427 TRUE FALSE 448316.5072 590067.9592 445998.6286 366891.7125 298524.3752 344659.406 282380.9689 263804.4181 252565.9049 188082.8629 2.383611671 3.137276571 2.371287962 1.950691875 1.58719604 1.832487025 1.501364689 1.402596781 1.342843792 1 17.52100888 -5.867545727 0.48795684 1.195340232 3.174485118 0.828211375 0.248493959 0.704500857 0.267518059 0.197406136 0.722657994 1.36E-06 5.867545727 1.979144887 up AMST(ph)TSISSPQPGK ddPTM_A459_MK2206_30min_R1 1 AMSTTSISSPQPGK 14 0 H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3;Q9UJU6-6 H0Y5J4;B4DDD6 DBNL Drebrin-like protein 1 AMS(0.204)T(0.601)T(0.155)S(0.04)ISSPQPGK 195.87 0.00028834 24942000 8065.8 7412.2 7452.3 6543.8 6345.3 5093.8 5277.5 4035.3 3806.4 3751.3 TRUE FALSE 7379.761355 6929.664433 6946.458639 7047.80461 6092.553265 5382.206554 4925.447604 4000.019798 4202.088901 4216.039365 1.750401435 1.6436432 1.647626608 1.671664802 1.445089274 1.276602538 1.16826414 0.948762441 0.996691097 1 12.04167262 -6.890723459 0.963745107 0.965760444 1.700720018 0.977312675 0.04503948 0.072110227 0.141677211 0.028215901 0.022655859 1.29E-07 6.890723459 0.734959574 AMSTT(ph)SISSPQPGK ddPTM_A459_MK2206_30min_R1 1 AMSTTSISSPQPGK 14 0 H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3;Q9UJU6-6 H0Y5J4;B4DDD6 DBNL Drebrin-like protein 1 AMS(0.01)T(0.056)T(0.307)S(0.204)IS(0.305)S(0.118)PQPGK 122.66 0.01774 13412000 4315.4 3406.2 4199.7 3396.8 4439.4 3831.3 5125 4088.9 3641.6 3956.8 TRUE FALSE 3948.352569 3184.455761 3914.636065 3658.422125 4262.569297 4048.224895 4783.120601 4053.151178 4020.157352 4446.998256 0.887869152 0.716091075 0.880287295 0.822672264 0.958527315 0.91032752 1.075584096 0.911435297 0.90401595 1 12.11861612 -6.231485208 1.800094359 0.963697703 0.813468643 0.48903005 0.065670377 0.295774977 1.889479258 0.02244628 0.030400935 5.87E-07 6.231485208 -0.15022906 AMSTT(ph)SISSPQPGK ddPTM_A459_MK2206_30min_R2 1 AMSTTSISSPQPGK 14 0 H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3;Q9UJU6-6 H0Y5J4;B4DDD6 DBNL Drebrin-like protein 1 AMS(0.089)T(0.164)T(0.579)S(0.169)ISSPQPGK 225.33 2.28E-09 66091000 222690 339510 226860 187380 195920 169040 169480 151340 138470 90800 TRUE FALSE 239739.3176 322650.4271 234423.3992 172070.4546 188227.1964 175472.9357 147227.0724 171120.6576 150513.8703 87837.20344 2.729359636 3.673277546 2.668839512 1.958970093 2.142909713 1.997706311 1.676135699 1.948156942 1.713554899 1 16.4225445 -1.522878745 0.163555393 0.931464021 10.42397817 0.761456202 0.337081333 29.46559322 0.310143014 0.980291568 67.73619877 0.03 1.522878745 9.492514148 up AMSTTSIS(ph)SPQPGK ddPTM_A459_MK2206_30min_R2 2 AMSTTSISSPQPGK 14 0 H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3;Q9UJU6-6 H0Y5J4;B4DDD6 DBNL Drebrin-like protein 1 AMSTTS(0.018)IS(0.771)S(0.211)PQPGK;AMSTTS(0.008)IS(0.795)S(0.197)PQPGK 147.73 0.0017941 28577000 105100 103000 99123 106394 110198 105185 120965 82993 95874 119130 TRUE FALSE 113146.5368 97885.16978 102427.7113 97701.26986 105871.0728 109187.8889 105082.1502 93840.47006 104212.9472 115242.7979 0.981810047 0.849382101 0.888799242 0.84778634 0.918678432 0.947459546 0.911832688 0.814284899 0.904290326 1 16.81431707 AMSTTSISS(ph)PQPGK ddPTM_A459_MK2206_30min_R1 4 AMSTTSISSPQPGK 14 0 H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3;Q9UJU6-6 H0Y5J4;B4DDD6 DBNL Drebrin-like protein 1 AMSTTSIS(0.032)S(0.968)PQPGK;AMSTTSIS(0.002)S(0.998)PQPGK;AMSTTSIS(0.065)S(0.934)PQPGK;AMSTTSIS(0.069)S(0.931)PQPGK 266.85 3.77E-44 142340000 31339 25154.2 27513.6 23632.8 29843.1 24629.1 32316.2 30536.3 26668.7 26727.9 TRUE FALSE 28673.45348 23516.65701 25646.05349 25453.00235 28654.38613 26023.57836 30160.44526 30269.32435 29441.0068 30039.15404 0.954535985 0.78286682 0.853754186 0.847327535 0.953901235 0.866321945 1.004037771 1.007662343 0.980087747 1 14.87455656 -7.010477025 1.071149487 1.004691886 0.856576053 0.565416226 0.050292466 0.354418076 0.835661294 0.030352215 0.021563941 9.76E-08 7.010477025 -0.148115833 AMSTTSISS(ph)PQPGK ddPTM_A459_MK2206_30min_R2 4 AMSTTSISSPQPGK 14 0 H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3;Q9UJU6-6 H0Y5J4;B4DDD6 DBNL Drebrin-like protein 1 AMSTTSIS(0.022)S(0.978)PQPGK;AMSTTS(0.001)IS(0.03)S(0.97)PQPGK;AMSTTSIS(0.044)S(0.956)PQPGK;AMSTTSIS(0.06)S(0.94)PQPGK 236.42 2.54E-19 242670000 464820 425885 485493 466812 543132 497271 560193 399885 441417 580454 TRUE FALSE 500406.9766 404736.1702 501679.0943 428671.9663 521805.9087 516194.9964 486638.9862 452151.3425 479810.6528 561513.8335 0.891174797 0.720794656 0.893440311 0.763421915 0.929284156 0.919291682 0.866655383 0.805236337 0.854494803 1 19.09896204 -6.265861478 24.99251872 0.885803523 0.815766429 0.230921155 0.068825911 635.0824767 3589315.779 0.020586784 0.024172149 5.42E-07 6.265861478 -0.070037094 AMT(ph)LSPQEEVAAGQMASSSR ddPTM_A459_MK2206_30min_R1 1 AMTLSPQEEVAAGQMASSSR 20 0 A0A494BZT8;Q9Y6A5 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 AMT(0.997)LS(0.003)PQEEVAAGQMASSSR 104.7 0.0052378 3965300 3556.9 3223.7 3273.8 2246 2998.1 2898 3254.9 2935.8 2697.6 2327.8 TRUE FALSE 3254.366977 3013.836544 3051.583577 2418.987309 2878.679328 3062.082256 3037.77156 2910.13261 2978.025173 2616.185438 1.243935896 1.151996529 1.1664248 0.924623795 1.100334589 1.170437772 1.161145351 1.112357162 1.138308138 1 11.35324909 -14.52287874 0.014034658 1.71E-06 1.991318683 0.182353387 0.07884812 15250.09515 16.18033803 1417.417227 926.6340171 3.00E-15 14.52287874 1.991316975 AMT(ph)LSPQEEVAAGQMASSSR ddPTM_A459_MK2206_30min_R2 2 AMTLSPQEEVAAGQMASSSR 20 0 A0A494BZT8;Q9Y6A5 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 AMT(0.962)LS(0.038)PQEEVAAGQMASSSR;AMT(0.987)LS(0.013)PQEEVAAGQMASSSR 249.26 1.52E-37 21708400 20200.1 29601.2 25860.9 27124 25178 28074.1 31342 22040 24280.8 27428.7 TRUE FALSE 21746.63519 28131.24745 26723.0895 24907.88243 24189.38521 29142.47955 27226.75775 24920.70367 26392.70009 26533.70377 0.819585361 1.060208092 1.007137554 0.938726182 0.911647519 1.098319323 1.02611976 0.939209388 0.994685865 1 14.69553845 -6.717218201 24.99997185 1.00877174 0.956554839 0.170771978 0.069160566 310.668955 175632.3467 0.023260282 0.023260158 1.92E-07 6.717218201 -0.052216901 AMT(ph)RCPRAS(ph)SMSGSCGRR ddPTM_A459_MK2206_30min_R1 1 AMTRCPRASSMSGSCGRR 18 3 Q9Y250-7 Q9Y250-7 2 AMT(1)RCPRAS(0.423)S(0.423)MS(0.026)GS(0.127)CGRR 65.477 0.016258 20324000 4053.5 3824.7 4306.3 3114.6 3379.2 3417.8 4337.8 3665.9 3813.1 3215.6 TRUE FALSE 3708.728539 3575.711335 4014.000354 3354.487032 3244.599308 3611.312882 4048.433277 3633.849423 4209.48539 3613.972805 1.026219272 0.989412906 1.110689142 0.928199301 0.897792951 0.999263989 1.120216863 1.005499936 1.164780594 1 11.81936993 -7.146519156 7.195162018 1.072799854 0.989374954 0.243070374 0.069834108 0.393073284 22.1102544 0.02719208 0.021039242 7.14E-08 7.146519156 -0.0834249 AMT(ph)RCPRASSMSGS(ph)CGRR ddPTM_A459_MK2206_30min_R2 1 AMTRCPRASSMSGSCGRR 18 3 Q9Y250-7 Q9Y250-7 2 AMT(1)RCPRAS(0.061)S(0.061)MS(0.061)GS(0.816)CGRR 62.469 0.020395 6931200 19919 23699 17978 19809 23433 25580 25217 17490 26826 24499 TRUE FALSE 21444.01396 22522.14212 18577.37755 18190.54133 22512.90268 26553.46482 21905.97761 19776.00305 29159.27699 23699.59964 0.904826001 0.950317409 0.783868835 0.767546356 0.949927553 1.120418287 0.924318467 0.834444605 1.230370025 1 14.53257507 -6.514251077 24.36362951 1.008764619 0.854458481 0.339846169 0.111100573 383.6042984 1083262.448 0.036198415 0.038009007 3.06E-07 6.514251077 -0.154306138 AMTLS(ph)PQEEVAAGQMASSSR ddPTM_A459_MK2206_30min_R1 2 AMTLSPQEEVAAGQMASSSR 20 0 A0A494BZT8;Q9Y6A5 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 AMT(0.095)LS(0.905)PQEEVAAGQMASSSR;AMTLS(1)PQEEVAAGQMASSSR 306.67 9.12E-102 57532000 3526.1 3258.9 2695.1 3137.5 3593.8 3331.4 3511.2 3203 2912.9 2305.4 TRUE FALSE 3226.186679 3046.745018 2512.164121 3379.150794 3450.651336 3520.020989 3276.974255 3174.996509 3215.706379 2591.010357 1.245146192 1.175890714 0.969569309 1.304182666 1.331778288 1.358551493 1.264747648 1.225389354 1.241101322 1 11.33929907 -4.442619066 18.03224693 1.220261371 1.942207456 0 0.124246903 289.0337815 180549.364 0.031158595 14892.73545 3.61E-05 4.442619066 0.721946085 AMTLS(ph)PQEEVAAGQMASSSR ddPTM_A459_MK2206_30min_R2 11 AMTLSPQEEVAAGQMASSSR 20 0 A0A494BZT8;Q9Y6A5 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 AMT(0.247)LS(0.753)PQEEVAAGQMASSSR;AMT(0.004)LS(0.996)PQEEVAAGQMASSSR;AMT(0.01)LS(0.99)PQEEVAAGQMASSSR;AMT(0.142)LS(0.857)PQEEVAAGQMAS(0.001)SSR;AMTLS(1)PQEEVAAGQMASSSR;AMT(0.026)LS(0.973)PQEEVAAGQMASSSR;AMTLS(1)PQEEVAAGQMASSSR;AMT(0.002)LS(0.998)PQEEVAAGQMASSSR;AMT(0.069)LS(0.931)PQEEVAAGQMASSSR;AMT(0.08)LS(0.92)PQEEVAAGQMASSSR;AMT(0.141)LS(0.859)PQEEVAAGQMASSSR 288.37 1.32E-85 56978800 184805.4 226698 213242.3 250935 250703 229482 264720 201768.1 207192.8 219096.4 TRUE FALSE 198954.2435 215440.507 220351.6919 230432.8078 240859.1405 238215.0983 229961.946 228139.8834 225214.0552 211947.3024 0.938696748 1.016481477 1.039653203 1.08721746 1.136410503 1.123935505 1.084995862 1.07639909 1.062594582 1 17.69334608 -4.950421073 1.293216399 1.088083531 0.905328884 0.593441105 0.036112526 0.684195766 1.250421954 0.011069556 0.153462702 1.12E-05 4.950421073 -0.182754647 ANAS(ph)PQKPLDLK ddPTM_A459_MK2206_30min_R1 2 ANASPQKPLDLK 12 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK 112.62 0.029902 270184000 15858.8 15186.7 15451.6 14076.3 12052.8 10225.3 12674.2 14615.9 14414.1 12891.3 TRUE FALSE 14509.92578 14198.04307 14402.78844 15160.45906 11572.71145 10804.24765 11828.72724 14488.11473 15912.49728 14488.37157 1.001487691 0.979961275 0.994092978 1.046388063 0.798758604 0.745718565 0.816429037 0.999982273 1.098294394 1 13.82260783 -6.241508797 24.91121032 0.896983915 1.00284602 0.168459572 0.101618642 1475.880945 1844701.686 0.03342711 0.04309258 5.73E-07 6.241508797 0.105862105 ANAS(ph)PQKPLDLK ddPTM_A459_MK2206_30min_R2 1 ANASPQKPLDLK 12 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 ANAS(1)PQKPLDLK 78.903 0.023683 333070000 1248500 1237600 1293100 1231100 1288300 885800 1479400 1138500 1000800 1324400 TRUE FALSE 1344086.12 1176142.584 1336211.309 1130515.192 1237714.869 919509.7397 1285153.003 1287305.859 1087847.775 1281184.936 1.0490961 0.918011561 1.042949593 0.88239813 0.966070419 0.717702584 1.003097185 1.004777548 0.84909504 1 20.28904731 -1.522894039 0.717269787 0.920545951 17.43730341 0.124110298 0.091854967 692.5013801 3.426434795 0.035219479 18395.15132 0.029998944 1.522894039 16.51675746 ANASNS(ph)PSSLR ddPTM_A459_MK2206_30min_R2 1 ANASNSPSSLR 11 0 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 1 ANAS(0.426)NS(0.434)PS(0.137)S(0.003)LR 89.747 0.028801 3111200 13553 15452 15526 15594 18173 16367 18547 12238 14580 13210 TRUE FALSE 14590.6281 14684.67615 16043.62909 14319.92032 17459.43671 16989.85765 16111.75662 13837.54862 15848.14205 12778.95878 1.141769713 1.149129315 1.255472325 1.120585844 1.36626442 1.329518151 1.260803552 1.082838505 1.240174753 1 13.64148267 -9.207469258 0.876960635 0.998986374 1.224912609 0.349987906 0.087777097 3.320509935 3.29007297 0.10392777 0.030121625 6.20E-10 9.207469258 0.225926235 ANASNSPS(ph)SLR ddPTM_A459_MK2206_30min_R2 2 ANASNSPSSLR 11 0 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 1 ANAS(0.074)NS(0.251)PS(0.675)S(0.001)LR;ANAS(0.09)NS(0.309)PS(0.592)S(0.008)LR 132.86 0.0019305 9808000 44972.5 43439 36662 42456 53730 47509 43638 97738 66198 49056 TRUE FALSE 48415.62918 41281.88243 37884.29278 38987.20899 51620.29023 49316.98829 37908.27818 110512.6922 71955.78238 47455.30674 1.020236355 0.86991077 0.798315202 0.821556358 1.087766443 1.039230208 0.798820633 2.328774162 1.516285266 1 15.53428181 -7.733396499 24.99999949 1.691897917 0.920164666 0.497293997 0.317691224 141.6331779 126264.9452 0.140461667 0.081074312 1.85E-08 7.733396499 -0.771733251 ANDDIIVNWVNR ddPTM_A459_MK2206_30min_R2 1 ANDDIIVNWVNR 12 0 A0A0A0MSQ0;P13797-3;P13797-2;P13797 A0A0A0MSQ0 PLS3 Plastin-3 0 153.95 0.0063074 3517800 11997 17756 13984 18578 16399 18262 16768 13152 15527 15358 FALSE TRUE 12915.49954 16874.26286 14450.21958 17060.11797 15755.09286 18956.97321 14566.34146 14871.01156 16877.51039 14856.86972 0.869328451 1.135788573 0.972628814 1.148298282 1.060458438 1.275973578 0.980444854 1.000951872 1.136007161 1 13.85884256 -4.752032831 24.85580944 1.08032533 0.869328004 0.320530915 0.091540625 422.5483851 1116453.641 0.02221571 0.274441551 1.77E-05 4.752032831 -0.210997326 ANEAGGQVGPEAPRPPET(ph)SPEMR ddPTM_A459_MK2206_30min_R1 2 ANEAGGQVGPEAPRPPETSPEMR 23 1 Q8N3D4;E9PIH6 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 ANEAGGQVGPEAPRPPET(0.5)S(0.5)PEMR;ANEAGGQVGPEAPRPPET(0.583)S(0.417)PEMR 74.029 0.001439 49292000 4607.4 4154.9 3508.8 3129 5115.1 4684.7 4992.5 4794.6 3799.8 3108.2 TRUE FALSE 4215.516436 3884.415255 3270.632432 3369.996122 4911.354736 4949.943666 4659.459434 4752.681318 4194.802808 3493.267282 1.206754621 1.111971957 0.936267445 0.964711787 1.405948741 1.416995399 1.333839944 1.360526102 1.200825036 1 11.77036132 -6.260533868 24.99986866 1.313288358 1.050525484 0.406252403 0.13468281 74.08025219 2045241.884 0.040617764 0.049414338 5.49E-07 6.260533868 -0.262762873 ANEAGGQVGPEAPRPPETS(ph)PEMR ddPTM_A459_MK2206_30min_R1 1 ANEAGGQVGPEAPRPPETSPEMR 23 1 Q8N3D4;E9PIH6 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 ANEAGGQVGPEAPRPPET(0.304)S(0.696)PEMR 57.951 0.008288 34178000 1441.8 1066.8 1186 1078.1 2005.1 1845.6 1851.2 1501.5 1142.1 1013.6 TRUE FALSE 1319.167339 997.3511261 1105.497624 1161.135449 1925.232621 1950.096277 1727.709826 1488.372544 1260.825382 1139.17242 1.158004983 0.875504979 0.970439246 1.019279811 1.690027415 1.711853484 1.516635932 1.306538429 1.106790649 1 10.15377041 -6.167457946 8.000155166 1.426083991 0.991088506 0.40707599 0.223467532 0.291422623 22.30858759 0.069008555 0.089278672 6.80E-07 6.167457946 -0.434995485 ANEAGGQVGPEAPRPPETS(ph)PEMR ddPTM_A459_MK2206_30min_R2 1 ANEAGGQVGPEAPRPPETSPEMR 23 1 Q8N3D4;E9PIH6 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 ANEAGGQVGPEAPRPPET(0.302)S(0.698)PEMR 48.224 0.03239 31227000 22345 34845 32040 34191 35498 40817 35408 29967 27943 33299 TRUE FALSE 24055.75038 33114.64797 33108.19761 31397.48593 34104.17016 42370.31954 30758.88707 33883.78979 30373.43163 32212.45636 0.746784105 1.028007539 1.027807294 0.974700146 1.058726158 1.315339602 0.954875553 1.051884694 0.942909516 1 14.97533106 -4.758673499 4.765031834 1.046589442 0.724120119 0.436574201 0.09962885 0.186473586 10.19881603 0.025531186 0.204860171 1.74E-05 4.758673499 -0.322469323 ANGSQPNSGS(ph)PQPAP ddPTM_A459_MK2206_30min_R1 1 ANGSQPNSGSPQPAP 15 0 J3KR72;P49848-4;P49848-2;P49848;P49848-3 J3KR72 TAF6 Transcription initiation factor TFIID subunit 6 1 ANGSQPNS(0.023)GS(0.977)PQPAP 104.09 0.0052292 1978500 1173.1 1138.5 1141.4 935.07 976.08 841.24 1272 1053.9 998.25 745.38 TRUE FALSE 1073.321685 1064.383443 1063.924948 1007.089253 937.2006667 888.8702818 1187.147201 1044.685863 1102.02166 837.7233017 1.281236516 1.270566834 1.270019523 1.202174097 1.118747282 1.061054742 1.417111352 1.247053605 1.315496009 1 9.710329993 -5.749628729 8.185914759 1.205333427 1.27382169 0.087706764 0.113705547 0.4625222 197.0522642 0.032133433 0.053213129 1.78E-06 5.749628729 0.068488263 ANGSQPNSGS(ph)PQPAP ddPTM_A459_MK2206_30min_R2 4 ANGSQPNSGSPQPAP 15 0 J3KR72;P49848-4;P49848-2;P49848;P49848-3 J3KR72 TAF6 Transcription initiation factor TFIID subunit 6 1 ANGS(0.001)QPNS(0.036)GS(0.963)PQPAP;ANGSQPNS(0.004)GS(0.996)PQPAP;ANGSQPNS(0.242)GS(0.757)PQPAP;ANGSQPNS(0.006)GS(0.994)PQPAP 128.85 0.00093471 4428300 51411.8 61035 58603 70426 63047 60303 61751 45922.6 56001 57721 TRUE FALSE 55347.92694 58004.09065 60556.79477 64671.97052 60571.45799 62597.87292 53643.01952 51924.8415 60871.86575 55837.5685 0.991230966 1.038800439 1.084517045 1.158216095 1.08477965 1.121070896 0.960697626 0.929926623 1.090159679 1 15.7689485 -7.265404127 24.94817406 0.989356532 1.081916296 0.346400863 0.056639491 386.8712951 2434369.777 0.024140763 0.01693402 5.43E-08 7.265404127 0.092559763 ANHVSYKPTMTTTYEGS(ph)SMSLSR ddPTM_A459_MK2206_30min_R2 1 ANHVSYKPTMTTTYEGSSMSLSR 23 1 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 ANHVSYKPTMT(0.008)T(0.027)T(0.023)Y(0.001)EGS(0.275)S(0.275)MS(0.229)LS(0.161)R 46.296 0.039336 5328700 3298.9 10199 6222.2 12282 13812 14513 14015 7642.3 11002 6310 TRUE FALSE 3551.46632 9692.532491 6429.645042 11278.52131 13269.67148 15065.30238 12174.81366 8641.17485 11958.93407 6104.105217 0.581816039 1.587871137 1.053331293 1.847694447 2.17389298 2.468060731 1.994528802 1.415633339 1.959162506 1 12.57556411 -4.729416456 0.921890817 1.881000326 5.04E-07 0.382830958 0.441469846 2.440111595 1.526526711 0.155936934 4.737297465 1.86E-05 4.729416456 -1.880999822 ANLACS(ph)PLGGGEPSPGAGEPSK ddPTM_A459_MK2206_30min_R2 1 ANLACSPLGGGEPSPGAGEPSK 22 0 Q9ULL5;Q9ULL5-2 Q9ULL5 PRR12 Proline-rich protein 12 1 ANLACS(1)PLGGGEPSPGAGEPSK 198.45 2.69E-22 7424800 33604 33991 31200 34718 35045 26529 34630 26686 26301 36652 TRUE FALSE 36176.74808 32303.05637 32240.19243 31881.42834 33668.95721 27538.57968 30083.0394 30173.95183 28588.61344 35456.04824 1.02032657 0.911073229 0.909300219 0.899181661 0.949597005 0.776696249 0.84846002 0.851024108 0.806311331 1 15.11374413 -6.73637423 24.9596907 0.846684922 0.932666201 0.28420456 0.06337222 269.5893093 268454.3872 0.019854421 0.019846628 1.83E-07 6.73637423 0.085981278 ANNSQEPS(ph)PQLASSVASTR ddPTM_A459_MK2206_30min_R1 1 ANNSQEPSPQLASSVASTR 19 0 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 ANNSQEPS(0.998)PQLAS(0.001)S(0.001)VASTR 109.37 0.0006999 6262200 1110.3 1210.6 918.58 973.6 1340.2 1060.8 1492.3 1425.1 1044.8 1472.5 TRUE FALSE 1015.863155 1131.78972 856.2293489 1048.586841 1286.816996 1120.861579 1392.75139 1412.640501 1153.410699 1654.924417 0.613842629 0.683892091 0.517382752 0.633616152 0.777568439 0.677288683 0.84158006 0.853598199 0.696956723 1 10.69254961 -7.900291865 0.181729166 1.101376857 0.472042606 0.67424303 0.075906118 1.981207926 0.374576645 0.508418674 0.528785641 1.26E-08 7.900291865 -0.629334252 ANNTFY(ph)GLSAGVFTK ddPTM_A459_MK2206_30min_R2 1 ANNTFYGLSAGVFTK 15 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 ANNT(0.006)FY(0.993)GLS(0.001)AGVFTK 129.37 0.0085546 0 6393.1 8710.7 7339.6 8956.6 8941.4 6998.8 6590.3 7353.6 5763.2 7133 TRUE FALSE 6882.560651 8278.139305 7584.298601 8224.817129 8590.315709 7265.144238 5724.985694 8314.740769 6264.472719 6900.250794 0.997436304 1.199686729 1.09913376 1.191959158 1.244928042 1.052881186 0.829677915 1.204991096 0.907861599 1 12.75243308 -6.991106169 24.07948651 0.99393872 1.14940109 0.32840438 0.108653606 149.4812002 404707.3094 0.03682806 0.032426431 1.02E-07 6.991106169 0.15546237 ANNTFYGLSAGVFT(ph)K ddPTM_A459_MK2206_30min_R1 1 ANNTFYGLSAGVFTK 15 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 ANNT(0.003)FYGLS(0.025)AGVFT(0.972)K 151.73 0.00056303 19683000 5369.3 5927.4 4533.5 3991 5514.8 5668.4 5853.5 3517.3 4290.8 5559.6 TRUE FALSE 4912.61284 5541.525183 4225.778651 4298.387512 5295.133838 5989.339909 5463.023695 3486.548617 4736.844015 6248.365221 0.786223703 0.886876005 0.676301481 0.687921938 0.847443075 0.958545107 0.874312481 0.55799373 0.758093333 1 12.60926307 -4.486178495 15.74954675 0.794648828 0.754423627 0 0.130157266 44275726.96 592047892.9 0.0335317 49496324.28 3.26E-05 4.486178495 -0.040225201 ANNTFYGLSAGVFTK ddPTM_A459_MK2206_30min_R1 2 ANNTFYGLSAGVFTK 15 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 202.92 0.00015453 44830000 3457 4929.7 4370.4 4725.3 4793.7 4516 4384.4 3911.3 2632.4 3843.4 FALSE TRUE 3162.963997 4608.775634 4073.749425 5089.243425 4602.756778 4771.692017 4091.924676 3877.103916 2906.0474 4319.549408 0.732243968 1.066957499 0.94309592 1.178188497 1.0655641 1.104673559 0.947303593 0.897571378 0.672766329 1 12.07666511 -7.728691161 2.762808232 0.828256951 1.023219624 0.211021356 0.135128155 0.364848272 5.613629656 0.080289704 0.037412651 1.87E-08 7.728691161 0.194962673 ANNTFYGLSAGVFTK ddPTM_A459_MK2206_30min_R2 2 ANNTFYGLSAGVFTK 15 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 166.64 0.0010829 8970100 29725 34106 29180 39690 38153 31748 35781 26533 24978 37476 FALSE TRUE 32000.76885 32412.34563 30152.84664 36447.20004 36654.92152 32956.19239 31082.91172 30000.9542 27150.54129 36253.16119 0.882702854 0.894055706 0.831730135 1.005352329 1.011082077 0.909057067 0.857384865 0.827540364 0.74891514 1 15.14581918 -10.88175866 6.685358396 1.000005723 0.889401887 0.171103713 0.075244887 7.05E-06 6.77E-07 0.080075321 0.019420113 1.31E-11 10.88175866 -0.110603836 ANPFGGAS(ph)HAK ddPTM_A459_MK2206_30min_R2 1 ANPFGGASHAK 11 0 D6RD47;P62266;D6RDJ2;D6RIX0;D6R9I7 D6RD47 RPS23 40S ribosomal protein S23 1 ANPFGGAS(1)HAK 72.615 0.039733 3172100 17677 26677 17218 26865 24119 25425 30701 25152 20315 22768 TRUE FALSE 19030.36471 25352.25897 17792.03953 24670.04356 23171.96687 26392.56619 26669.92182 28439.45276 22081.96198 22025.08202 0.864031502 1.15106309 0.807808094 1.120088612 1.052071763 1.198295932 1.210888649 1.291230277 1.002582508 1 14.42685977 -5.92707264 11.56406184 1.142638254 0.96194553 0.316607883 0.121289407 0.663411925 102.2817617 0.033095809 0.04911253 1.18E-06 5.92707264 -0.180692724 ANPFGGASHAK ddPTM_A459_MK2206_30min_R1 1 ANPFGGASHAK 11 0 D6RD47;P62266;D6RDJ2;D6RIX0;D6R9I7 D6RD47 RPS23 40S ribosomal protein S23 0 120.55 0.0066005 6875200 6312.6 6419.2 6033.4 5884 6112.9 5314.7 5967 5859.5 4931.9 4617.3 FALSE TRUE 5775.680221 6001.308913 5623.869618 6337.1867 5869.410249 5615.613721 5568.952317 5808.271009 5444.588654 5189.325983 1.112992369 1.156471752 1.083737972 1.221196495 1.131054451 1.082147034 1.07315523 1.11927272 1.049189947 1 12.34133145 -6.759776096 3.967131564 1.071591147 1.144139124 0.437529889 0.043201966 0.225815708 7.916955603 0.014891114 0.013928426 1.74E-07 6.759776096 0.072547977 ANQIS(ph)PSNSSLK ddPTM_A459_MK2206_30min_R2 2 ANQISPSNSSLK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 ANQIS(0.595)PS(0.232)NS(0.156)S(0.016)LK;ANQIS(0.901)PS(0.099)NSSLK 185.2 0.00010451 40780000 89724 64605 69553 78383 68514 57903 90442 66532 53740 79693 TRUE FALSE 96593.33843 61396.80964 71871.86231 71978.85817 65823.7961 60106.53924 78566.85676 75227.96084 58414.20806 77092.62394 1.252951755 0.796403164 0.932279363 0.93366725 0.853827419 0.779666538 1.019122878 0.975812691 0.757714618 1 16.23430521 -4.751615418 24.99811428 0.89499556 1.252952474 0.593153477 0.089113789 280.8792601 714677.7495 0.021738272 0.281692927 1.77E-05 4.751615418 0.357956915 ANQISPS(ph)NSSLK ddPTM_A459_MK2206_30min_R1 2 ANQISPSNSSLK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 ANQIS(0.175)PS(0.808)NS(0.017)SLK;ANQIS(0.009)PS(0.987)NS(0.003)SLK 175.6 0.00010345 28469000 8226 7981.3 8894.1 6333.9 6753.7 7511.6 8021 5821.6 9205.8 9821.8 TRUE FALSE 7526.335504 7461.715919 8290.393272 6821.738075 6484.685828 7936.900301 7485.933725 5770.702365 10162.77585 11038.59873 0.681819829 0.675965863 0.751036746 0.617989497 0.587455526 0.71901339 0.678159783 0.522774901 0.920658147 1 13.43026942 -8.41184595 5.253437298 0.996575043 0.65848351 0.794998809 0.062646754 0.089848654 3.297077169 0.06078308 0.015810458 3.87E-09 8.41184595 -0.338091532 ANQISPS(ph)NSSLK ddPTM_A459_MK2206_30min_R2 2 ANQISPSNSSLK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 ANQIS(0.235)PS(0.758)NS(0.006)S(0.001)LK;ANQIS(0.078)PS(0.892)NS(0.025)S(0.005)LK 109.99 0.0074068 37977000 74003 63062 68427 65583 63838 56254 78788 69105 49325 78214 TRUE FALSE 79668.72658 59930.43278 70708.32203 60224.65911 61331.39936 58394.78539 68443.04096 78137.26077 53615.19934 75661.88359 1.05295722 0.792082221 0.93453029 0.79597092 0.810598368 0.771786038 0.904590762 1.032716304 0.70861571 1 16.20727907 -9.822312552 11.07140006 1.000005192 0.866288777 0.120480247 0.107708577 0 0 0.100028431 0.024260458 1.51E-10 9.822312552 -0.133716415 ANQISPS(ph)NSSLKNPQAGVPPFSSLK ddPTM_A459_MK2206_30min_R1 2 ANQISPSNSSLKNPQAGVPPFSSLK 25 1 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 ANQIS(0.029)PS(0.323)NS(0.323)S(0.323)LKNPQAGVPPFSSLK;ANQIS(0.013)PS(0.315)NS(0.23)S(0.23)LKNPQAGVPPFS(0.178)S(0.035)LK 86.211 4.96E-05 35595000 7666.8 7340.3 8004.6 6706.9 8111.6 6136.2 7261.9 7883.2 6220.7 5063.7 TRUE FALSE 7014.6984 6862.445136 7461.270054 7223.4666 7788.497795 6483.626341 6777.471901 7814.278014 6867.364026 5691.029385 1.23258868 1.205835477 1.311058079 1.269272413 1.368556946 1.139271282 1.190904394 1.373086921 1.206699801 1 12.47447391 -8.54891605 22.44641243 0.999999997 1.260512748 0.549262224 0.070917014 1488.887869 1283549.377 0.069058203 0.017830751 2.83E-09 8.54891605 0.260512751 ANQISPS(ph)NSSLKNPQAGVPPFSSLK ddPTM_A459_MK2206_30min_R2 2 ANQISPSNSSLKNPQAGVPPFSSLK 25 1 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 ANQIS(0.064)PS(0.311)NS(0.311)S(0.311)LKNPQAGVPPFS(0.002)S(0.001)LK;ANQIS(0.008)PS(0.331)NS(0.331)S(0.331)LKNPQAGVPPFSSLK 62.193 0.0026053 38415000 121566 152870 144228 195879 202145 155108 172940 127493 155100 159400 TRUE FALSE 130873.1864 145278.6981 149036.4895 179875.0591 194207.7716 161010.7436 150232.7703 144156.7728 168590.3176 154198.7911 0.848730302 0.942151992 0.966521777 1.166514069 1.259463646 1.044176433 0.974279819 0.934876155 1.093330995 1 17.23443193 -5.388716025 2.678366956 1.06718634 0.887196188 0.360547907 0.092106804 0.345825889 4.727531489 0.028720683 0.075024897 4.09E-06 5.388716025 -0.179990152 ANS(ph)DTDLVTSESR ddPTM_A459_MK2206_30min_R1 1 ANSDTDLVTSESR 13 0 A0A2R8Y6F3;Q9P2P5;C9JHL2 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 ANS(0.999)DT(0.001)DLVTSESR 174.4 0.00012449 2919800 1045.6 802.06 926.23 581.2 1007.9 655.07 927.99 849.45 1026.7 715.86 TRUE FALSE 956.6662293 749.8457482 863.3600882 625.9641247 967.7532087 692.1594973 866.0854803 842.0233482 1133.429139 804.5461413 1.189075654 0.932010869 1.073102019 0.778033841 1.202856069 0.860310505 1.076489509 1.046581799 1.408780778 1 9.652031353 -8.028714325 23.20822694 1.212154233 1.010893523 0.184299131 0.156065367 422.2133443 341247.0088 0.095694769 0.036379309 9.36E-09 8.028714325 -0.20126071 ANS(ph)DTDLVTSESR ddPTM_A459_MK2206_30min_R2 1 ANSDTDLVTSESR 13 0 A0A2R8Y6F3;Q9P2P5;C9JHL2 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 ANS(0.793)DT(0.207)DLVTSESR 207.85 1.05E-05 22947000 18153 18363 12621 15210 19078 15254 18320 9682.6 13314 15143 TRUE FALSE 19542.80764 17451.12012 13041.77784 13967.29435 18328.90186 15834.50166 15914.56199 10948.14907 14472.02765 14648.88515 1.334081566 1.191293395 0.890291494 0.95347149 1.251214797 1.080935614 1.086400899 0.747370804 0.987926897 1 13.83850325 -5.032873851 4.30073605 1.004479803 1.312255292 0.432694743 0.125163255 0.193615535 8.207242713 0.034793284 0.120930569 9.27E-06 5.032873851 0.307775489 ANS(ph)FVGTAQYVSPELLTEK ddPTM_A459_MK2206_30min_R1 1 ANSFVGTAQYVSPELLTEK 19 0 E9PER6;Q6A1A2;O15530-4;O15530-5;O15530;O15530-2 E9PER6 PDPK1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 1 ANS(0.99)FVGT(0.01)AQYVSPELLTEK 195.59 2.25E-15 36354000 4513.8 5336.8 5371.2 4767.4 4747.8 3672.2 4317.9 4602.9 4832.4 4265.8 TRUE FALSE 4129.877607 4989.37335 5006.617909 5134.585974 4558.685072 3880.116791 4029.860769 4562.657331 5334.745273 4794.279509 0.861417779 1.040693047 1.04428995 1.070981774 0.950859261 0.80932219 0.840556076 0.951687802 1.112731384 1 12.22709831 -4.736153359 24.28853323 0.972845663 0.861417044 0.12580156 0.092095139 4479.936967 4302890.541 0.02565292 1.743434328 1.84E-05 4.736153359 -0.111428618 ANS(ph)FVGTAQYVSPELLTEK ddPTM_A459_MK2206_30min_R2 1 ANSFVGTAQYVSPELLTEK 19 0 E9PER6;Q6A1A2;O15530-4;O15530-5;O15530;O15530-2 E9PER6 PDPK1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 1 ANS(0.998)FVGT(0.001)AQYVSPELLTEK 127.07 0.00035598 31164000 64127 77776 64317 81897 79506 62885 76605 66880 62951 78401 TRUE FALSE 69036.61243 73913.75694 66461.29668 75205.75312 76384.19495 65278.13274 66546.67148 75621.44563 68426.36419 75842.78179 0.910259497 0.974565479 0.87630352 0.991600668 1.007138625 0.860703302 0.877429202 0.997081645 0.90221327 1 16.21072426 -10.78881397 3.924337078 1.000085779 0.934609061 0.126238568 0.052708104 13214939.13 18165309.08 7634.122345 0.012791314 1.63E-11 10.78881397 -0.065476718 ANS(ph)LDNER ddPTM_A459_MK2206_30min_R2 1 ANSLDNER 8 0 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 ANS(1)LDNER 94.82 0.022387 17756000 62865 70510 61698 73631 66356 69314 71786 61352 57490 63411 TRUE FALSE 67677.99273 67008.57593 63754.98053 67615.11177 63750.53003 71951.79284 62360.41197 69370.91705 62490.37628 61341.90426 1.103291356 1.092378477 1.039338137 1.102266266 1.039265585 1.172963143 1.016603784 1.130889526 1.018722471 1 15.90458533 -8.428126693 6.105299227 1.000395121 1.084974996 0.335422448 0.044051675 0.228305002 11.13702084 0.038742938 0.010042615 3.73E-09 8.428126693 0.084579875 ANS(ph)PEKPPEAGAAHKPR ddPTM_A459_MK2206_30min_R1 2 ANSPEKPPEAGAAHKPR 17 2 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 1 ANS(1)PEKPPEAGAAHKPR;ANS(1)PEKPPEAGAAHKPR 52.93 0.034947 34681000 11130.7 14189.6 13279.5 13256.1 8670.7 8034.8 10770.7 12850.8 10973.8 10893.6 TRUE FALSE 10183.97552 13265.85446 12378.12454 14277.08712 8325.327658 8489.723432 10052.20626 12738.44681 12114.56578 12243.18141 0.831807941 1.083530009 1.011021901 1.166125588 0.679997084 0.693424621 0.821045276 1.040452345 0.989494918 1 13.57969087 -6.252432135 24.98261712 0.861408246 1.026572003 0.223793809 0.138319425 1041.652398 2889140.681 0.044207288 0.056232019 5.59E-07 6.252432135 0.165163757 ANS(ph)PEKPPEAGAAHKPR ddPTM_A459_MK2206_30min_R2 1 ANSPEKPPEAGAAHKPR 17 2 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 1 ANS(1)PEKPPEAGAAHKPR 46.873 0.0475 113200000 74835 72817 80385 67356 71240 51088 74852 60874 63038 83890 TRUE FALSE 80564.42514 69201.01367 83064.99578 61852.79934 68442.75965 53032.18964 65023.84249 68830.44081 68520.93129 81152.67617 0.992751305 0.852726206 1.023564468 0.762178184 0.843382657 0.65348664 0.801253213 0.84815984 0.844345923 1 16.30835105 -5.769472764 24.99999077 0.808529233 0.94598522 0.302875123 0.091581488 200.6459357 624413.861 0.02489203 0.037663388 1.70E-06 5.769472764 0.137455987 ANS(ph)TSDSVFTETPSPVLK ddPTM_A459_MK2206_30min_R1 1 ANSTSDSVFTETPSPVLK 18 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 ANS(0.961)T(0.022)S(0.012)DS(0.003)VFT(0.002)ETPSPVLK 179.1 6.95E-10 0 444.03 435.8 678.59 469.28 373.71 451.75 444.53 487 427.26 430.53 TRUE FALSE 406.2629168 407.4293408 632.5292015 505.4240269 358.8243394 477.3276946 414.8762148 482.7422103 471.675206 483.8673067 0.839616381 0.842027008 1.307236907 1.044550892 0.741575912 0.986484699 0.857417331 0.997674783 0.974802801 1 8.918467654 -5.073914998 24.99996853 0.983539864 0.840154008 0.159348827 0.135466459 234.8190422 79420.82157 0.03629631 0.096031118 8.43E-06 5.073914998 -0.143385855 ANS(ph)TSDSVFTETPSPVLK ddPTM_A459_MK2206_30min_R2 2 ANSTSDSVFTETPSPVLK 18 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 ANS(0.757)T(0.193)S(0.049)DS(0.001)VFTETPSPVLK;ANS(0.929)T(0.057)S(0.014)DSVFTETPSPVLK 157.47 2.08E-05 5515900 55715 63428 73543 63096 83985 54798 68570 51764 63956 72441 TRUE FALSE 59980.58324 60278.25775 75994.88691 57940.85497 80687.32691 56883.37629 59566.67663 58529.73253 69518.77727 70077.2561 0.85592083 0.860168635 1.084444385 0.826813979 1.15140534 0.811723795 0.850014398 0.835217241 0.992030527 1 16.09665867 ANSALT(ph)PPKPESGLTLQESNTPGLR ddPTM_A459_MK2206_30min_R1 2 ANSALTPPKPESGLTLQESNTPGLR 25 1 Q9BW04-2;Q9BW04 Q9BW04-2 SARG Specifically androgen-regulated gene protein 1 ANS(0.011)ALT(0.989)PPKPES(0.001)GLTLQESNTPGLR;ANS(0.009)ALT(0.555)PPKPES(0.424)GLT(0.012)LQESNTPGLR 106.74 4.02E-07 30275000 7661.4 9228.4 9101.1 7497.5 6988.2 7183.1 7870.1 8577.2 7117.2 6956.1 TRUE FALSE 7009.757698 8627.629483 8483.342689 8074.958749 6709.845196 7589.800914 7345.099989 8502.210445 7857.058409 7817.874184 0.896632196 1.103577428 1.085121414 1.032884203 0.858269785 0.97082669 0.939526502 1.087534827 1.005012133 1 12.93256065 -6.036605007 24.99726279 0.976025083 1.039798111 0.101440051 0.074628031 1198.227696 818257.997 0.022690612 0.029303461 9.19E-07 6.036605007 0.063773028 ANSALTPPKPESGLT(ph)LQESNTPGLR ddPTM_A459_MK2206_30min_R1 1 ANSALTPPKPESGLTLQESNTPGLR 25 1 Q9BW04-2;Q9BW04 Q9BW04-2 SARG Specifically androgen-regulated gene protein 1 ANS(0.001)ALT(0.012)PPKPES(0.344)GLT(0.553)LQES(0.04)NT(0.05)PGLR 60.991 0.0085915 29296000 5248.8 6333.4 6642.4 5483.7 5907.8 4602 5432.9 6301.7 5794.3 5674.3 TRUE FALSE 4802.361997 5921.094509 6191.532395 5906.055524 5672.479816 4862.561263 5070.481154 6246.604901 6396.63822 6377.275123 0.753042938 0.928467785 0.97087428 0.92610957 0.889483315 0.762482592 0.795085841 0.979510023 1.003036265 1 12.63872441 -7.882479145 7.098152193 0.997798027 0.867690708 0.438114594 0.069138082 0.242562365 13.93409213 0.042191618 0.020111724 1.31E-08 7.882479145 -0.130107319 ANSALTPPKPESGLT(ph)LQESNTPGLR ddPTM_A459_MK2206_30min_R2 1 ANSALTPPKPESGLTLQESNTPGLR 25 1 Q9BW04-2;Q9BW04 Q9BW04-2 SARG Specifically androgen-regulated gene protein 1 ANS(0.002)ALT(0.199)PPKPES(0.275)GLT(0.477)LQES(0.037)NT(0.011)PGLR 64.589 0.003331 38141000 80428 87690 84322 73035 103150 79941 111430 78581 95657 100090 TRUE FALSE 86585.62952 83335.44211 87133.25339 67067.80687 99099.81271 82983.21077 96799.10715 88851.80651 103977.073 96824.0715 0.894257267 0.860689298 0.899913132 0.692676995 1.023503879 0.857051449 0.999742168 0.917662366 1.073876272 1 16.56307814 -7.238290995 0.882639302 1.015814479 0.853905425 0.368883221 0.082306753 0.661096729 1.008367862 0.061176092 0.036428765 5.78E-08 7.238290995 -0.161909055 ANSFVGT(ph)AQYVSPELLTEK ddPTM_A459_MK2206_30min_R2 2 ANSFVGTAQYVSPELLTEK 19 0 E9PER6;Q6A1A2;O15530-4;O15530-5;O15530;O15530-2 E9PER6 PDPK1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 1 ANS(0.037)FVGT(0.963)AQYVSPELLTEK;ANS(0.032)FVGT(0.906)AQY(0.044)VS(0.018)PELLTEK 211.26 2.94E-16 157282000 90001 107619 113740 101156 106970 82011 119546 82484 78675 106262 TRUE FALSE 96891.54576 102274.797 117532.0348 92891.23122 102769.8203 85131.98607 103849.4666 93264.94201 85518.00929 102794.6796 0.942573547 0.994942514 1.143366906 0.903657967 0.999758165 0.828175022 1.010261105 0.907293474 0.831930306 1 16.64940607 -5.846462688 24.99931731 0.924529135 1.023840059 0.266267645 0.076826522 31.57679903 9279.698139 0.021194534 0.031436587 1.42E-06 5.846462688 0.099310925 ANSFVGTAQYVS(ph)PELLTEK ddPTM_A459_MK2206_30min_R2 1 ANSFVGTAQYVSPELLTEK 19 0 E9PER6;Q6A1A2;O15530-4;O15530-5;O15530;O15530-2 E9PER6 PDPK1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 1 ANS(0.005)FVGT(0.007)AQY(0.053)VS(0.935)PELLT(0.001)EK 122.46 0.00042049 33918000 49486 50452 45174 55664 46722 46004 56814 37330 44060 44473 TRUE FALSE 53274.68621 47946.62704 46680.07861 51116.07314 44887.45952 47754.71446 49354.25355 42209.15917 47892.25916 43021.84965 1.238316963 1.11447154 1.085031885 1.188142155 1.043364241 1.110010723 1.147190415 0.98110982 1.113207813 1 15.39278193 -1.522878745 0.127625249 0.979231262 1.649547524 0.427288355 0.057202901 86.84424041 0.755741719 0.317949322 10.4387579 0.03 1.522878745 0.670316262 ANSPS(ph)LFGTEGKPK ddPTM_A459_MK2206_30min_R1 1 ANSPSLFGTEGKPK 14 1 Q5JPT2;Q96B97-2;Q96B97;Q96B97-3 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 ANS(0.16)PS(0.597)LFGT(0.243)EGKPK 102.15 0.036968 89103000 4467.1 5146.1 5969.1 4456.8 4934.4 3797.2 5814.7 5905.8 5331.7 5486.7 TRUE FALSE 4087.149687 4811.087955 5563.934123 4800.063508 4737.852399 4012.194183 5426.811973 5854.166213 5885.949295 6166.433818 0.662806057 0.780205885 0.902293657 0.778418069 0.768329401 0.650650652 0.880056793 0.949360098 0.954514306 1 12.59022067 -7.51372214 4.566138367 0.958565732 0.765498185 0.667466315 0.067094564 0.134712185 7.294273927 0.033365038 0.020147748 3.06E-08 7.51372214 -0.193067547 ANSPS(ph)LFGTEGKPK ddPTM_A459_MK2206_30min_R2 2 ANSPSLFGTEGKPK 14 1 Q5JPT2;Q96B97-2;Q96B97;Q96B97-3 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 ANS(0.496)PS(0.504)LFGTEGKPK;ANS(0.226)PS(0.774)LFGTEGKPK 83.964 0.014684 506300000 295490 367400 397610 373400 340820 281064 416270 314580 364840 374570 TRUE FALSE 318112.9416 349155.4502 410866.119 342892.0256 327437.6943 291760.0875 361613.249 355696.6861 396573.1237 362347.8116 0.87792152 0.963591994 1.133899822 0.946306324 0.90365578 0.805193458 0.997972769 0.981644361 1.094454309 1 18.46701566 -7.899155246 2.551560854 1.043986516 0.946578079 0.182779856 0.083252472 0.554364293 7.020164426 0.064609678 0.025023665 1.26E-08 7.899155246 -0.097408438 ANST(ph)SDSVFTETPSPVLK ddPTM_A459_MK2206_30min_R2 1 ANSTSDSVFTETPSPVLK 18 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 ANS(0.051)T(0.381)S(0.381)DS(0.188)VFTETPSPVLK 145.43 0.00063101 2451200 14538 17241 16962 14174 20135 16001 18657 13504 14181 16947 TRUE FALSE 15651.04046 16384.83701 17527.50461 13015.93886 19344.39873 16609.92927 16207.31349 15269.01917 15414.43775 16394.02078 0.954679799 0.99943981 1.069140076 0.79394427 1.179966708 1.013169953 0.988611257 0.931377322 0.940247542 1 14.00088211 -7.596531954 5.652790908 0.952311139 1.003176653 0.043678257 0.092043298 0.676082803 37.98101481 0.043480454 0.024720515 2.53E-08 7.596531954 0.050865514 ANSTS(ph)DSVFTETPSPVLK ddPTM_A459_MK2206_30min_R1 2 ANSTSDSVFTETPSPVLK 18 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 ANS(0.368)T(0.171)S(0.46)DSVFTETPSPVLK;ANS(0.008)T(0.246)S(0.745)DS(0.001)VFTETPSPVLK 287.48 1.34E-80 12656900 4021 4074.9 4708.6 3624.2 4281.5 3125.46 3512.52 4022.1 3434.14 3196.12 TRUE FALSE 3678.992835 3809.623269 4388.993351 3903.336512 4110.958789 3302.420844 3278.2062 3986.935204 3791.131142 3592.079475 1.024195834 1.060562077 1.221853075 1.086650933 1.144450956 0.919361854 0.912620732 1.109923996 1.055414049 1 11.81060355 -6.745361514 24.99908197 1.000906648 1.110122493 0.353386894 0.073043378 300.1153394 466641.1658 0.025901627 0.025824518 1.80E-07 6.745361514 0.109215845 ANSTSDSVFTETPS(ph)PVLK ddPTM_A459_MK2206_30min_R2 2 ANSTSDSVFTETPSPVLK 18 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 ANSTSDSVFTET(0.006)PS(0.994)PVLK;ANSTSDSVFTET(0.001)PS(0.999)PVLK 147.1 0.00022791 7090700 67684 76550 63810 64921 66853 53036 55281 44856 46689 49976 TRUE FALSE 72865.93908 72748.63831 65937.39355 59616.74663 64228.01531 55054.32214 48022.5383 50718.83321 50749.92483 48345.28721 1.507198391 1.504772078 1.363884617 1.233144947 1.328526916 1.138773298 0.993324087 1.049095706 1.049738822 1 15.56108764 -6.046925918 0.516738642 0.988594346 1.604085021 0.918147901 0.054336727 0.390782996 0.18755897 0.044813613 0.126875332 8.98E-07 6.046925918 0.615490675 ANSWQLVET(ph)PEK ddPTM_A459_MK2206_30min_R1 2 ANSWQLVETPEK 12 0 Q9Y2H0-3;Q9Y2H0;Q9Y2H0-1;F8WF49;A0A0B4J2C2 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 ANSWQLVET(1)PEK;ANS(0.048)WQLVET(0.952)PEK 178.67 0.00024272 15219000 6501.5 7165.1 7012.5 6042.9 4790.2 4775.8 5427.2 5185.6 6006.4 5684.5 TRUE FALSE 5948.513284 6698.650688 6536.511038 6508.325205 4599.396191 5046.201669 5065.16139 5140.262846 6630.786774 6388.738776 0.931093521 1.048509091 1.023130115 1.018718316 0.719922406 0.78985882 0.792826498 0.804581785 1.037886664 1 12.64131544 -6.232744193 24.29472452 0.841124777 1.009713785 0.35343044 0.09637957 508.0112944 430106.3125 0.028315645 0.036546758 5.85E-07 6.232744193 0.168589008 ANSWQLVET(ph)PEK ddPTM_A459_MK2206_30min_R2 2 ANSWQLVETPEK 12 0 Q9Y2H0-3;Q9Y2H0;Q9Y2H0-1;F8WF49;A0A0B4J2C2 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 ANSWQLVET(1)PEK;ANSWQLVET(1)PEK 166.64 0.0010802 3537700 36142 35199 29707 34912 33557 31593 37261 27403 30622 37228 TRUE FALSE 38909.05931 33451.06884 30697.41655 32059.57792 32239.38357 32795.29375 32368.58594 30984.66619 33285.44621 36013.25341 1.08040945 0.928854399 0.852392207 0.890216098 0.895208861 0.910645128 0.898796495 0.860368427 0.924255463 1 15.13624032 -4.778946487 3.782543186 0.897795659 1.099493056 0.647216892 0.038595188 0.138159416 3.507358979 0.008947979 0.078305165 1.66E-05 4.778946487 0.201697396 ANSWQLVET(ph)PEKR ddPTM_A459_MK2206_30min_R1 3 ANSWQLVETPEKR 13 1 Q9Y2H0-3;Q9Y2H0;Q9Y2H0-1;F8WF49;A0A0B4J2C2 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 ANSWQLVET(1)PEKR;ANSWQLVET(1)PEKR;ANSWQLVET(1)PEKR 236.05 1.09E-12 46452800 12004.8 12027.9 12761 11001 9891 9157.26 10784.2 10011.53 10821.7 10542 TRUE FALSE 10983.72872 11244.88152 11894.81887 11848.29893 9497.020525 9675.736148 10064.80569 9924.000249 11946.65444 11848.02255 0.927051639 0.949093528 1.003949716 1.000023327 0.801570092 0.816654096 0.849492449 0.83760815 1.008324756 1 13.53235867 -6.245812331 24.97646828 0.872235164 0.970956994 0.246547702 0.069987404 1011.16177 1616124.031 0.020728339 0.026668115 5.68E-07 6.245812331 0.098721831 ANSWQLVET(ph)PEKR ddPTM_A459_MK2206_30min_R2 2 ANSWQLVETPEKR 13 1 Q9Y2H0-3;Q9Y2H0;Q9Y2H0-1;F8WF49;A0A0B4J2C2 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 ANSWQLVET(1)PEKR;ANSWQLVET(1)PEKR 133.32 0.0016659 102013000 119291 162043 166485 141293 152735 132093 170939 134784 105238 156654 TRUE FALSE 128424.0107 153996.1803 172035.5268 129748.9099 146737.8565 137119.8917 148494.504 152400.7316 114391.411 151542.3928 0.847446106 1.016192086 1.135230371 0.856188869 0.96829576 0.904828604 0.97988755 1.005664018 0.754847597 1 17.20936191 -5.804823518 24.99999945 0.92782563 1.001282043 0.112850748 0.096451241 302.2259948 174155.5468 0.026775236 0.039714363 1.57E-06 5.804823518 0.073456413 ANT(ph)SGDFEKDDDAYK ddPTM_A459_MK2206_30min_R2 1 ANTSGDFEKDDDAYK 15 1 P49792;Q99666;O14715;J3KQ37 P49792;Q99666 RANBP2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 ANT(0.634)S(0.366)GDFEKDDDAYK 127.83 0.010041 0 35495 19718 21526 18660 20157 13481 33618 25334 11089 30081 TRUE FALSE 38212.52449 18738.83279 22243.6661 17135.41831 19365.5349 13994.0289 29203.91622 28645.24078 12053.50118 29099.45943 1.313169565 0.643958106 0.764401351 0.588856929 0.665494661 0.480903397 1.003589647 0.984390822 0.414217357 1 14.82870473 -4.756780837 24.99842208 0.722658533 1.313170455 0.431314714 0.201750527 137.0412082 735294.5727 0.049545459 0.389794478 1.75E-05 4.756780837 0.590511922 ANTIPIIGS(ph)PSSK ddPTM_A459_MK2206_30min_R2 1 ANTIPIIGSPSSK 13 0 E9PGM7;O94988-6;O94988-5;O94988-1;O94988 E9PGM7 FAM13A Protein FAM13A 1 ANTIPIIGS(0.973)PS(0.017)S(0.01)K 150.01 0.00050394 8145000 96939 95156 78812 113470 82431 97623 110230 93699 78368 103190 TRUE FALSE 104360.7244 90430.69141 81439.55274 104199.138 79194.34476 101338.1117 95756.66859 105945.781 85184.30698 99822.91875 1.045458555 0.905911113 0.815840228 1.043839825 0.793348319 1.015178808 0.959265365 1.061337239 0.8533542 1 16.60708347 ANTLS(ph)PVR ddPTM_A459_MK2206_30min_R1 4 ANTLSPVR 8 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 ANT(0.038)LS(0.962)PVR;ANT(0.01)LS(0.99)PVR;ANT(0.204)LS(0.796)PVR;ANT(0.025)LS(0.975)PVR 123.62 0.0040285 0 15439.4 14830.3 15623.5 13142.3 17537 14620.5 17090.5 14978.9 13571.2 12914.6 TRUE FALSE 14126.19795 13864.84477 14563.02035 14154.52222 16838.46415 15448.30008 15950.42393 14847.94106 14981.97481 14514.55815 0.973243402 0.955237124 1.003338869 0.975194841 1.160108629 1.064331406 1.098925904 1.022968864 1.032203299 1 13.82521303 -6.133345854 23.73686551 1.066240943 0.97710731 0.490939167 0.042996762 8.040704974 1468.555567 0.012728116 0.016431929 7.36E-07 6.133345854 -0.089133633 ANTS(ph)GDFEKDDDAYK ddPTM_A459_MK2206_30min_R2 1 ANTSGDFEKDDDAYK 15 1 P49792;Q99666;O14715;J3KQ37 P49792;Q99666 RANBP2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 ANT(0.06)S(0.913)GDFEKDDDAY(0.027)K 128.99 0.0050297 0 44335 24899 28712 24750 23485 15348 39922 28753 13834 32528 TRUE FALSE 47729.32169 23662.55187 29669.24375 22727.84583 22562.8609 15932.07889 34680.19345 32511.11582 15037.25631 31466.61402 1.516824201 0.751989135 0.942880086 0.722284444 0.71704127 0.506316914 1.102126636 1.033193969 0.477879708 1 14.94153432 -4.758805848 24.99969991 0.805780587 1.516825144 0.525290489 0.20272953 58.04666907 550918.4253 0.050220728 0.334611821 1.74E-05 4.758805848 0.711044556 ANVS(ph)SPHR ddPTM_A459_MK2206_30min_R2 2 ANVSSPHR 8 0 Q5QPM7;H0Y555;Q5QPM9;Q92530 Q5QPM7;Q92530 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.906)S(0.094)PHR;ANVS(0.5)S(0.5)PHR 77.192 0.035711 17206600 25494 13910.2 19656 18167.9 20721.6 17747.5 19383 51161 29317 28763 TRUE FALSE 27445.84024 13219.4397 20311.32123 16683.52445 19907.96587 18422.89355 16837.98882 57847.91836 31866.93967 27824.46567 0.986392356 0.475101296 0.729980639 0.599599096 0.715484211 0.662111315 0.605150482 2.079030701 1.145284874 1 14.76406636 -7.73115758 24.99987178 1.459118756 0.673220261 0.564994414 0.290875618 117.8766356 97315.96519 0.125368459 0.072370031 1.86E-08 7.73115758 -0.785898494 ANVS(ph)SPHREFPPATAR ddPTM_A459_MK2206_30min_R1 1 ANVSSPHREFPPATAR 16 1 Q5QPM7;H0Y555;Q5QPM9;Q92530 Q5QPM7;Q92530 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.5)S(0.5)PHREFPPATAR 95.365 0.0048035 46997000 524.4 417.86 458.16 537.15 588.86 328.92 358.77 549.78 321.37 273.3 TRUE FALSE 479.7970263 390.6572381 427.0613757 578.5213861 565.4044593 347.5431662 334.8371079 544.9733314 354.7775615 307.1584673 1.562050464 1.271842647 1.390361723 1.883462276 1.840758174 1.131478384 1.090111924 1.774241603 1.155031032 1 8.262839344 -6.776449016 24.99999749 1.2698089 1.577282967 0.315146996 0.261434524 376.6619467 627362.8267 0.097962455 0.086725832 1.67E-07 6.776449016 0.307474068 ANVS(ph)SPHREFPPATAR ddPTM_A459_MK2206_30min_R2 3 ANVSSPHREFPPATAR 16 1 Q5QPM7;H0Y555;Q5QPM9;Q92530 Q5QPM7;Q92530 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.599)S(0.401)PHREFPPATAR;ANVS(0.858)S(0.142)PHREFPPATAR;ANVS(0.839)S(0.161)PHREFPPATAR 65.219 0.030961 68416000 60595 86011 73666 93885 76834 80337 90270 67713 82305 69556 TRUE FALSE 65234.19979 81739.81881 76121.98767 86214.29518 73817.1111 83394.28083 78417.44057 76563.32159 89463.74013 67286.39342 0.969500615 1.214804579 1.131313239 1.281303556 1.097058519 1.239392938 1.165427906 1.137872276 1.329596306 1 16.03802717 -4.756143834 24.99437739 1.182583642 0.96950028 0.322589294 0.090109519 181.5858121 856971.3861 0.020244563 0.167605084 1.75E-05 4.756143834 -0.213083362 ANVSS(ph)PHR ddPTM_A459_MK2206_30min_R2 1 ANVSSPHR 8 0 Q5QPM7;H0Y555;Q5QPM9;Q92530 Q5QPM7;Q92530 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.159)S(0.841)PHR 116.52 0.0061598 78981000 28220 12909 15456 18872 20340 17254 20443 45304 27402 22737 TRUE FALSE 30380.5449 12267.95783 15971.29533 17330.09723 19541.3494 17910.61306 17758.80954 51225.38835 29785.37643 21995.09355 1.381241904 0.557758838 0.726129911 0.787907412 0.888441295 0.814300381 0.807398682 2.328946146 1.354182757 1 14.42489412 -7.718721733 24.97495149 1.63117411 0.833232846 0.433838816 0.368210608 102.1571066 59726.24261 0.161571579 0.093282494 1.91E-08 7.718721733 -0.797941263 ANVSS(ph)PHREFPPATAR ddPTM_A459_MK2206_30min_R2 3 ANVSSPHREFPPATAR 16 1 Q5QPM7;H0Y555;Q5QPM9;Q92530 Q5QPM7;Q92530 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.211)S(0.789)PHREFPPATAR;ANVS(0.441)S(0.559)PHREFPPATAR;ANVS(0.242)S(0.757)PHREFPPATAR 77.969 0.01482 54756000 30801.1 40611.6 39752.2 46348.4 47983 37697.7 49219.2 32291.7 47747.4 37719.2 TRUE FALSE 33159.2559 38594.887 41077.51851 42561.58746 46098.94632 39132.31239 42756.65992 36512.33606 51900.38254 36488.42559 0.908760939 1.057729578 1.125768455 1.166440776 1.263385459 1.072458232 1.171786922 1.000655289 1.422379335 1 15.15515128 -4.773048264 1.555088029 1.157447527 0.810265548 0.293513854 0.117750698 1.345926354 3.042897456 0.03118108 0.72645048 1.69E-05 4.773048264 -0.347181979 ANVSSPHREFPPAT(ph)AR ddPTM_A459_MK2206_30min_R1 1 ANVSSPHREFPPATAR 16 1 Q5QPM7;H0Y555;Q5QPM9;Q92530 Q5QPM7;Q92530 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.036)S(0.121)PHREFPPAT(0.842)AR 106.82 0.035512 5158300 2100.2 1967.7 2214.2 2061.4 2680.8 2416.5 1895.5 2028.7 1514.5 983.38 TRUE FALSE 1921.566961 1839.602372 2063.906273 2220.169385 2574.018059 2553.320142 1769.054654 2010.96329 1671.937695 1105.208539 1.738646504 1.664484401 1.867436055 2.008823953 2.328988575 2.310260962 1.600652358 1.819532893 1.512780291 1 10.1101029 -8.537952909 1.113989078 1.006031272 1.958688607 0.62628253 0.226346346 0.39875851 1.083546839 0.242263794 0.077495879 2.90E-09 8.537952909 0.952657335 ANVVT(ph)TPSTNR ddPTM_A459_MK2206_30min_R1 1 ANVVTTPSTNR 11 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;E9PDP5 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 ANVVT(0.791)T(0.208)PSTNR 110.93 0.019966 13583000 3055.8 3436.9 3765.5 3033 3482.6 2814.5 3352.6 3373.6 3243 4313.3 TRUE FALSE 2795.888163 3213.157185 3509.908351 3266.602186 3343.880667 2973.854558 3128.954171 3344.104971 3580.121455 4847.664168 0.576749557 0.662825863 0.724041153 0.67385076 0.689792146 0.61346134 0.645456051 0.689838416 0.738525057 1 12.24307404 -8.860050218 1.390744461 0.999844126 0.659001582 0.876574234 0.038480182 0.419503044 1.272502161 0.038609104 0.011374838 1.38E-09 8.860050218 -0.340842543 ANVVTT(ph)PSTNR ddPTM_A459_MK2206_30min_R1 1 ANVVTTPSTNR 11 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;E9PDP5 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 ANVVT(0.218)T(0.726)PS(0.043)T(0.013)NR 106.79 0.025539 5214600 3872.8 3105.9 3474.9 2787.7 4086.3 3477.7 4796.5 3804 3764.9 4348.1 TRUE FALSE 3543.398023 2903.705345 3239.03347 3002.409137 3923.534018 3674.604369 4476.534237 3770.742029 4156.274828 4886.775454 0.725099415 0.594196597 0.662816104 0.61439474 0.802888132 0.751948683 0.916050733 0.771621709 0.850514796 1 12.2546671 -6.646035112 1.191701659 0.868599441 0.642415535 0.663023545 0.071270457 0.283852743 0.852448934 0.032820643 0.033050885 2.26E-07 6.646035112 -0.226183906 ANVVTT(ph)PSTNR ddPTM_A459_MK2206_30min_R2 1 ANVVTTPSTNR 11 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;E9PDP5 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 ANVVT(0.224)T(0.734)PS(0.032)T(0.01)NR 97.957 0.04379 14566000 37325 36266 37409 43831 34377 42163 38557 29500 35000 39962 TRUE FALSE 40182.6307 34465.08318 38656.19739 40249.86709 33027.18625 43767.54251 33494.41958 33355.75129 38044.23673 38658.04321 1.039437782 0.891537189 0.999952253 1.041177042 0.854341904 1.1321717 0.86642822 0.862841171 0.984122153 1 15.23848099 APACS(ph)PEAAAAQLR ddPTM_A459_MK2206_30min_R2 1 APACSPEAAAAQLR 14 0 A0A0C3SFZ9;M0QZI3;O14526-3;O14526-2;O14526 A0A0C3SFZ9 FCHO1 F-BAR domain only protein 1 1 APACS(1)PEAAAAQLR 112.02 0.0037457 3777900 7999.3 8051.6 8586.3 9828.2 7742.4 11279 9090.9 7070.2 7937.1 7221.1 TRUE FALSE 8611.732558 7651.769252 8872.562957 9025.204621 7438.394474 11708.23025 7897.25391 7994.299416 8627.454611 6985.476098 1.232805386 1.09538264 1.270144344 1.291995634 1.064837152 1.676081928 1.130524792 1.14441726 1.235056063 1 12.77014273 -8.995172421 0.935188791 1.000910028 1.248271276 0.163540406 0.162959244 3.072791231 4.182449687 0.160019082 0.051454168 1.01E-09 8.995172421 0.247361248 APAGPSLEETSVS(ph)SPK ddPTM_A459_MK2206_30min_R1 1 APAGPSLEETSVSSPK 16 0 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 APAGPSLEETS(0.005)VS(0.497)S(0.497)PK 165.78 1.75E-05 16735000 2237.1 2429.1 2783.7 2101 1768 1639.6 2138.1 1999.8 2056.1 1966.8 TRUE FALSE 2046.822898 2270.965148 2594.7502 2262.819384 1697.576816 1732.432735 1995.47125 1982.315959 2269.838953 2210.462033 0.925970619 1.027371253 1.173849703 1.023686157 0.76797375 0.783742362 0.902739437 0.896788061 1.026861769 1 11.11013224 -6.087769706 8.448533089 0.886265552 1.050380449 0.347952606 0.094261287 0.356352412 31.46595242 0.029205462 0.03780743 8.17E-07 6.087769706 0.164114896 APAGPSLEETSVSS(ph)PK ddPTM_A459_MK2206_30min_R1 2 APAGPSLEETSVSSPK 16 0 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 APAGPSLEETSVS(0.138)S(0.862)PK;APAGPSLEETS(0.028)VS(0.094)S(0.878)PK 192.18 1.10E-06 24310500 3722.9 4140.4 4319.4 3317.7 2568.5 2947.7 3006.3 3160.9 3520.7 3886.5 TRUE FALSE 3406.247805 3870.859207 4026.211163 3573.229829 2466.191206 3114.596227 2805.755212 3133.264585 3886.689364 4367.988962 0.779820607 0.886187955 0.921753969 0.818049189 0.564605641 0.713050389 0.64234485 0.717324291 0.889812085 1 12.0927535 -6.011011894 24.62354056 0.728944822 0.865773249 0.121508774 0.120491591 673.5821861 1506193.888 0.033902307 0.046700073 9.75E-07 6.011011894 0.136828427 APAGPSLEETSVSS(ph)PK ddPTM_A459_MK2206_30min_R2 3 APAGPSLEETSVSSPK 16 0 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 APAGPSLEETSVS(0.096)S(0.904)PK;APAGPSLEETSVS(0.441)S(0.559)PK;APAGPSLEETSVS(0.04)S(0.96)PK 146.59 0.00034213 44854000 144018 145912 155206 141407 137708 116718 174069 119068 112970 158224 TRUE FALSE 155044.1288 138666.2223 160380.4906 129853.5958 132300.892 121159.7853 151213.5312 134630.5964 122795.9264 153061.1638 1.012955376 0.905953011 1.04781962 0.848377162 0.86436617 0.791577577 0.987928795 0.879586912 0.802267037 1 17.22374875 -5.775053547 24.99859417 0.876907093 0.980613715 0.310399981 0.072419071 270.4072701 496526.4241 0.019776029 0.029513938 1.68E-06 5.775053547 0.103706623 APAPAAPRS(ph)PNLAGK ddPTM_A459_MK2206_30min_R1 2 APAPAAPRSPNLAGK 15 1 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 APAPAAPRS(1)PNLAGK;APAPAAPRS(1)PNLAGK 124.16 0.0064448 14958400 2317.3 2151 2415.4 2940.1 3184.8 2429 1770.18 3166.7 1000.33 602.89 TRUE FALSE 2120.201466 2010.969509 2251.449378 3166.547011 3057.942672 2566.527881 1652.094522 3139.013876 1104.317883 677.5805648 3.129076565 2.967867754 3.322777386 4.673314401 4.513031853 3.787782611 2.438225959 4.632679919 1.629795689 1 9.404248684 -8.408376207 5.042548764 1.028257005 3.664437091 0.640005018 0.716278043 0.137906091 4.771111439 0.723105619 0.188342229 3.91E-09 8.408376207 2.636180086 APAPLGTVADS(ph)LRASDGQLQAK ddPTM_A459_MK2206_30min_R2 2 APAPLGTVADSLRASDGQLQAK 22 1 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 APAPLGT(0.007)VADS(0.882)LRAS(0.112)DGQLQAK;APAPLGT(0.026)VADS(0.624)LRAS(0.349)DGQLQAK 49.709 0.031367 14511400 16614.2 27384 23325 33369 26350.8 25114.4 23560.6 17777 24277 29629 TRUE FALSE 17886.19593 26024.15038 24102.64386 30642.64596 25316.13519 26070.14609 20467.06492 20100.51494 26388.56958 28662.20816 0.624034123 0.907960414 0.84092069 1.069095786 0.883258368 0.909565165 0.714078441 0.701289825 0.920674689 1 14.80686214 -9.811507868 15.3533632 1.000000293 0.845258858 0.129022589 0.123367684 0 0 0.123158051 0.029870215 1.54E-10 9.811507868 -0.154741435 APAPVVLGS(ph)PVVLGPPVGQAR ddPTM_A459_MK2206_30min_R1 2 APAPVVLGSPVVLGPPVGQAR 21 0 A0A0C4DFM2;Q6ZN55;Q6ZN55-2 A0A0C4DFM2 ZNF574 Zinc finger protein 574 1 APAPVVLGS(1)PVVLGPPVGQAR;APAPVVLGS(1)PVVLGPPVGQAR 210.43 8.01E-18 19850700 3349.7 3227.62 2985.76 2373.74 2848.6 2697.26 3232.76 2371.17 2766.55 2817.75 TRUE FALSE 3064.790425 3017.501351 2783.09493 2556.565866 2735.13423 2849.97653 3017.108479 2350.439111 3054.142773 3166.834143 0.967777372 0.95284477 0.878825604 0.807293894 0.863680921 0.899944993 0.952720712 0.742204677 0.964415133 1 11.6288256 -4.63444072 0.00264772 1.776408837 6.45E-05 0.009967472 0.07674317 1188048.039 470.4083703 154636.3782 161004.7122 2.32E-05 4.63444072 -1.776344349 APAPVVLGS(ph)PVVLGPPVGQAR ddPTM_A459_MK2206_30min_R2 2 APAPVVLGSPVVLGPPVGQAR 21 0 A0A0C4DFM2;Q6ZN55;Q6ZN55-2 A0A0C4DFM2 ZNF574 Zinc finger protein 574 1 APAPVVLGS(1)PVVLGPPVGQAR;APAPVVLGS(1)PVVLGPPVGQAR 111.09 0.00010429 20538400 23364.5 25173 17483.2 21886.5 19835.5 23880 26271 19255.8 19727 21169.9 TRUE FALSE 25153.30408 23922.94542 18066.08116 20098.30294 19056.6586 24788.77013 22821.58614 21772.59918 21442.8188 20479.1279 1.228240978 1.168162314 0.882170435 0.981404239 0.930540534 1.210440711 1.114382715 1.063160467 1.047057224 1 14.32186666 -5.021017461 22.45310255 1.034590972 1.213221565 0.381827289 0.087504821 198.1218568 211660.8799 0.024135459 0.065814646 9.53E-06 5.021017461 0.178630592 APASEDSLS(ph)VEGR ddPTM_A459_MK2206_30min_R1 1 APASEDSLSVEGR 13 0 O60269 O60269 GPRIN2 G protein-regulated inducer of neurite outgrowth 2 1 APAS(0.015)EDS(0.128)LS(0.858)VEGR 88.163 0.024164 2961400 983.77 924.41 1136.8 671.3 857.57 1094.9 878.35 677.15 807.79 610.29 TRUE FALSE 900.0951955 864.230741 1059.637183 723.0036423 823.411171 1156.892292 819.7568741 671.2297489 891.7626612 685.8973327 1.31228852 1.260000148 1.544891827 1.054098927 1.200487495 1.686684343 1.195159735 0.978615482 1.30014015 1 9.421848835 -7.515600916 24.95184198 1.101004169 1.338194843 0.27706307 0.183156735 472.5540216 1620156.136 0.082705075 0.050272706 3.05E-08 7.515600916 0.237190674 APAVPPARPGS(ph)R ddPTM_A459_MK2206_30min_R2 2 APAVPPARPGSR 12 1 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 1 APAVPPARPGS(1)R;APAVPPARPGS(1)R 89.507 0.014125 9895700 15868 12612.6 14122.4 14989.9 11970.7 14720.2 15140.3 14260.5 13935.7 16262.9 TRUE FALSE 17082.86628 11986.27662 14593.23377 13765.17722 11500.67017 15280.38753 13152.36042 16124.39631 15147.802 15732.2429 1.085850656 0.76189242 0.927600334 0.874965973 0.731025464 0.971278388 0.836013053 1.024926732 0.962850757 1 13.94143675 -7.76520445 24.99993857 0.995416578 0.878178515 0.218335182 0.096516813 139.980437 929435.9132 0.047577508 0.024233326 1.72E-08 7.76520445 -0.117238063 APDKGTDS(ph)PSPPPLEETSNGGR ddPTM_A459_MK2206_30min_R1 1 APDKGTDSPSPPPLEETSNGGR 22 1 Q4AC94 Q4AC94 C2CD3 C2 domain-containing protein 3 1 APDKGT(0.027)DS(0.948)PS(0.026)PPPLEETSNGGR 110.91 2.56E-05 3020000 864.72 688.69 850.2 820.42 905.53 913.31 735.9 906.44 466.13 536.37 TRUE FALSE 791.1710232 643.8561558 792.4907928 883.6088906 869.4608226 965.0208229 686.8094537 898.5150906 514.5858816 602.819565 1.312450805 1.068074418 1.314640133 1.465793318 1.442323496 1.600845226 1.139328405 1.490520784 0.853631686 1 9.235582431 -8.266913711 24.97465245 0.926815789 1.351097827 0.547249773 0.155490479 374.019471 1706299.105 0.140756676 0.040497053 5.41E-09 8.266913711 0.424282038 APDSGLPSGGGGRPGCAYPGS(ph)PGPGAR ddPTM_A459_MK2206_30min_R1 2 APDSGLPSGGGGRPGCAYPGSPGPGAR 27 1 Q6PJ61 Q6PJ61 FBXO46 F-box only protein 46 1 APDS(0.005)GLPS(0.253)GGGGRPGCAY(0.148)PGS(0.594)PGPGAR;APDS(0.001)GLPS(0.001)GGGGRPGCAY(0.203)PGS(0.795)PGPGAR 55.634 0.0051059 13933700 1051.55 1302.04 1304.6 899.14 1077.32 1224.95 1110.55 1232.41 1045.72 975.04 TRUE FALSE 962.1101506 1217.276959 1216.047387 968.3919186 1034.408063 1294.30561 1036.467236 1221.635169 1154.426336 1095.835316 0.877969651 1.110821071 1.109699029 0.883702053 0.943944813 1.181113249 0.945823903 1.114798137 1.053466994 1 10.09781529 APDSGLPSGGGGRPGCAYPGS(ph)PGPGAR ddPTM_A459_MK2206_30min_R2 1 APDSGLPSGGGGRPGCAYPGSPGPGAR 27 1 Q6PJ61 Q6PJ61 FBXO46 F-box only protein 46 1 APDS(0.002)GLPS(0.004)GGGGRPGCAY(0.122)PGS(0.871)PGPGAR 42.663 0.041093 9409000 9858.6 12025 9413.7 13321 11037 11287 12197 9452.4 10152 13193 TRUE FALSE 10613.382 11427.85599 9727.54806 12232.63169 10603.63192 11716.53469 10595.51925 10687.86113 11035.00261 12762.51349 0.831605937 0.895423617 0.762196888 0.958481391 0.830841976 0.918042884 0.830206311 0.837441711 0.864641798 1 13.63962487 -8.596745669 18.73658338 1 0.859062465 0.400500769 0.051882827 4269.67726 1083017.806 0.046511869 0.012009313 2.53E-09 8.596745669 -0.140937535 APDWVDAEECHR ddPTM_A459_MK2206_30min_R1 2 APDWVDAEECHR 12 0 I3L1P5;O14964-2;O14964 I3L1P5 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate 0 ; 131.69 0.0027953 12868800 11061.1 11255 11363.1 10509.1 12397.7 11246.1 12172 11997.1 9788.1 10161.4 FALSE TRUE 10120.29536 10522.29745 10591.80443 11318.5127 11903.87336 11882.84446 11360.02809 11892.21062 10805.60802 11420.27095 0.886169462 0.921370211 0.927456492 0.991089682 1.042345966 1.040504601 0.994724919 1.041324735 0.946177904 1 13.47930926 -5.747982741 2.577308844 1.014045002 0.906311492 0.712696462 0.028457341 0.142016539 1.922543867 0.00823716 0.015110149 1.79E-06 5.747982741 -0.107733509 APDWVDAEECHR ddPTM_A459_MK2206_30min_R2 2 APDWVDAEECHR 12 0 I3L1P5;O14964-2;O14964 I3L1P5 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate 0 ; 128.08 0.003515 8493100 51667 65291 59689 77816 66088 79266 73284 59143 59087 61573 FALSE TRUE 55622.66525 62048.74388 61679.00147 71458.18388 63493.05305 82282.52317 63661.72277 66873.19317 64226.28046 59563.87805 0.933832166 1.041717664 1.03551017 1.199689916 1.065965735 1.381416487 1.06879748 1.122713889 1.078275669 1 15.86215007 -5.172158456 1.410044369 1.140166398 0.931946138 0.252937351 0.101130448 0.861220141 2.490637075 0.0299411 0.207194257 6.73E-06 5.172158456 -0.20822026 APEATVTLPVFIGNIAVNHAPVS(ph)PR ddPTM_A459_MK2206_30min_R2 1 APEATVTLPVFIGNIAVNHAPVSPR 25 0 Q5T370;Q8N5I2 Q5T370 ARRDC1 Arrestin domain-containing protein 1 1 APEATVTLPVFIGNIAVNHAPVS(1)PR 109.51 2.42E-05 0 3184.3 4070.9 3010.8 3040.8 4172.8 3949.3 5199.9 2972.1 2919.4 4742 TRUE FALSE 3428.092456 3868.745026 3111.178569 2792.356913 4008.954905 4099.593379 4517.146884 3360.563675 3173.324135 4587.268928 0.747305752 0.843365647 0.678220226 0.608718816 0.873930648 0.893689348 0.984713771 0.73258484 0.691767626 1 12.16341977 -6.295930547 24.90649855 0.857052354 0.72531548 0.305486531 0.105547139 863.9136342 623840.3878 0.034813986 0.039476944 5.06E-07 6.295930547 -0.131736874 APELPNT(ph)SSSPSLK ddPTM_A459_MK2206_30min_R1 1 APELPNTSSSPSLK 14 0 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 APELPNT(0.368)S(0.11)S(0.368)S(0.153)PSLK 144.88 0.0012306 3641600 2457.7 2364.3 2261.9 2188.6 2027.5 1915.9 1972.4 1602.2 1927.3 1668.6 TRUE FALSE 2248.659709 2210.38364 2108.36853 2357.166351 1946.740382 2024.376602 1840.824795 1588.192134 2127.649732 1875.318765 1.199081325 1.178670891 1.124272081 1.256941697 1.038085054 1.079484 0.981606343 0.846891826 1.13455364 1 10.87292013 -6.62987354 1.622476947 0.984847792 1.183819929 0.538529376 0.078101268 0.275900786 1.49687691 0.031110853 0.031402436 2.34E-07 6.62987354 0.198972138 APELPNTSS(ph)SPSLK ddPTM_A459_MK2206_30min_R2 1 APELPNTSSSPSLK 14 0 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 APELPNT(0.003)S(0.003)S(0.493)S(0.493)PS(0.009)LK 108.32 0.0049226 5484400 25929 30264 25374 23812 31588 28713 34035 27732 23192 30857 TRUE FALSE 27914.14418 28761.13377 26219.9565 21866.48343 30347.6964 29805.69334 29566.16362 31356.66762 25209.19824 29850.13862 0.935142866 0.963517595 0.878386423 0.732542107 1.016668525 0.998511053 0.990486644 1.050469749 0.844525332 1 14.86545001 APELPNTSSS(ph)PSLK ddPTM_A459_MK2206_30min_R1 1 APELPNTSSSPSLK 14 0 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 APELPNT(0.001)SS(0.225)S(0.742)PS(0.031)LK 120.29 0.0020885 4192600 2192.8 2078.4 2550.2 1924.4 1944.9 1714.6 1995.9 1815 2107.3 1707.7 TRUE FALSE 2006.290845 1943.095782 2377.099529 2072.617621 1867.430515 1811.67917 1862.757153 1799.131646 2326.361376 1919.262768 1.045344534 1.012417796 1.238548243 1.079903 0.972993665 0.943945352 0.970558687 0.937407673 1.21211197 1 10.90633653 -6.167835906 5.686320423 0.998385146 1.100294733 0.17901741 0.091541818 0.376619401 18.3647667 0.027542641 0.035790137 6.79E-07 6.167835906 0.101909587 APELPNTSSS(ph)PSLK ddPTM_A459_MK2206_30min_R2 1 APELPNTSSSPSLK 14 0 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 APELPNTSS(0.207)S(0.767)PS(0.026)LK 132.24 0.00082383 5347500 27645 39968 32152 28506 24802 26146 38939 30843 28591 34180 TRUE FALSE 29761.52246 37983.24724 33223.93163 26176.96861 23828.14886 27141.00435 33826.26253 34874.286 31077.7935 33064.7094 0.90009932 1.148754909 1.004815474 0.791689057 0.720651997 0.82084509 1.023032204 1.054728338 0.939908261 1 15.0130046 -9.853500132 14.08086013 0.999988452 0.934649736 0.02500372 0.123854857 0 0 0.135398579 0.032838979 1.40E-10 9.853500132 -0.065338716 APEPDLMS(ph)PTR ddPTM_A459_MK2206_30min_R1 3 APEPDLMSPTR 11 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 APEPDLMS(0.718)PT(0.282)R;APEPDLMS(0.935)PT(0.065)R;APEPDLMS(0.912)PT(0.088)R 156 0.00054161 39112300 3797.7 3449.46 3569.27 2362.97 3478.36 2655.44 3270.37 2119.97 2554.45 2828.05 TRUE FALSE 3474.685672 3224.899527 3326.997897 2544.966359 3339.809556 2805.788718 3052.209584 2101.435326 2819.994219 3178.410185 1.093214994 1.014626602 1.046749068 0.800704192 1.050779906 0.882764827 0.960294426 0.66115926 0.8872342 1 11.63408961 -5.12729461 0.528272408 0.859827767 1.188928228 0.279833065 0.10732302 3.794463057 1.051737391 0.067166771 0.73762593 7.46E-06 5.12729461 0.329100461 APEPDLMS(ph)PTR ddPTM_A459_MK2206_30min_R2 3 APEPDLMSPTR 11 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 APEPDLMS(0.982)PT(0.018)R;APEPDLMS(0.953)PT(0.047)R;APEPDLMS(0.716)PT(0.284)R 124.38 0.0034207 30189000 48659 50626 40872.1 56028 37731.3 41539.7 43478 34227.8 32133.2 39663.8 TRUE FALSE 52384.37045 48111.98646 42234.75541 51450.33318 36249.77958 43120.52239 37769.28637 38701.49098 34928.08765 38369.57345 1.365258087 1.253909859 1.100735599 1.340914911 0.944753259 1.123820739 0.984355128 1.00865054 0.910306905 1 15.22767511 -5.557055418 0.439599286 0.950224977 1.457581955 0.651555534 0.092273507 1.672046098 0.413095952 0.073544799 0.415532197 2.77E-06 5.557055418 0.507356979 APES(ph)DTGDEDQDQER ddPTM_A459_MK2206_30min_R1 1 APESDTGDEDQDQER 15 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 APES(0.904)DT(0.096)GDEDQDQER 154.46 0.00030142 0 0 124.38 0 0 0 0 0 0 0 0 TRUE FALSE 0 116.2828394 0 0 0 0 0 0 0 0 0 APES(ph)DTGDEDQDQERDTVFLK ddPTM_A459_MK2206_30min_R1 2 APESDTGDEDQDQERDTVFLK 21 1 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 APES(0.506)DT(0.494)GDEDQDQERDTVFLK;APES(0.989)DT(0.011)GDEDQDQERDTVFLK 76.889 0.001497 26840000 3303.5 3809.9 3492.9 3452.9 3209.8 2842.2 2549.88 2992.2 2838.15 2649.55 TRUE FALSE 3022.519978 3561.874818 3255.81168 3718.842956 3081.946869 3003.122908 2379.782158 2966.039511 3133.185849 2977.796257 1.015019067 1.196144568 1.093362809 1.248857422 1.034975735 1.008505166 0.799175616 0.996051863 1.052182748 1 11.54002933 -6.585284211 3.120814308 0.95965278 1.139725849 0.451278513 0.085739768 0.22015099 4.362330554 0.02971901 0.030417457 2.60E-07 6.585284211 0.180073069 APES(ph)DTGDEDQDQERDTVFLK ddPTM_A459_MK2206_30min_R2 2 APESDTGDEDQDQERDTVFLK 21 1 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 APES(0.959)DT(0.041)GDEDQDQERDTVFLK;APES(0.943)DT(0.052)GDEDQDQERDT(0.005)VFLK 99.078 0.00017109 18141400 21336.8 34685 30845 38335 34290 34872 27169 19986.1 32174 29166 TRUE FALSE 22970.36181 32962.59334 31873.35691 35202.90787 32943.60231 36199.0784 23601.67766 22598.35189 34972.43636 28214.31581 0.814138538 1.168293201 1.129687394 1.24769667 1.167620102 1.283003942 0.836514265 0.80095339 1.239528068 1 14.78413974 -7.265832248 24.98762983 0.952661719 1.142937131 0.198110664 0.161607059 570.0854526 3242756.277 0.066002969 0.046200098 5.42E-08 7.265832248 0.190275413 APES(ph)PPSADPALVAGPAEEAECPPPR ddPTM_A459_MK2206_30min_R1 3 APESPPSADPALVAGPAEEAECPPPR 26 0 Q6EEV4-2;Q6EEV4 Q6EEV4-2 POLR2M "DNA-directed RNA polymerase II subunit GRINL1A, isoforms 4/5" 1 APES(0.983)PPS(0.017)ADPALVAGPAEEAECPPPR;APES(0.978)PPS(0.022)ADPALVAGPAEEAECPPPR;APES(0.955)PPS(0.045)ADPALVAGPAEEAECPPPR 150.44 3.57E-11 20094800 2776.93 2948.24 2963.45 2495.68 3010.19 2868.18 3092.58 2470.89 2776.95 3108.88 TRUE FALSE 2540.737521 2756.30904 2762.299271 2687.897706 2890.287758 3030.573873 2886.279631 2449.287269 3065.62389 3494.031525 0.727165025 0.788862098 0.790576516 0.769282614 0.827207121 0.867357335 0.826059985 0.700991749 0.877388732 1 11.77067691 -14.52287874 0.222079858 2.040576533 0.772263708 0.615686692 0.050038253 109.8173583 1.09623424 51.16794392 0.096596815 3.00E-15 14.52287874 -1.268312825 APES(ph)PPSADPALVAGPAEEAECPPPR ddPTM_A459_MK2206_30min_R2 3 APESPPSADPALVAGPAEEAECPPPR 26 0 Q6EEV4-2;Q6EEV4 Q6EEV4-2 POLR2M "DNA-directed RNA polymerase II subunit GRINL1A, isoforms 4/5" 1 APES(0.973)PPS(0.027)ADPALVAGPAEEAECPPPR;APES(0.923)PPS(0.077)ADPALVAGPAEEAECPPPR;APES(0.987)PPS(0.013)ADPALVAGPAEEAECPPPR 151.35 2.87E-11 12617600 40059.2 40742.7 34734.9 43095.9 35853.8 38832.7 40661.3 34992.5 35677.9 40581.6 TRUE FALSE 43126.16315 38719.47676 35892.94423 39574.82711 34445.99966 40310.50561 35322.42247 39566.1399 38781.09925 39257.42572 1.098547915 0.986296887 0.914296941 1.00808513 0.877439084 1.026824986 0.899764104 1.007863842 0.987866589 1 15.26067795 -4.78270341 3.977614527 0.963060022 1.110580463 0.39763839 0.04882862 0.211880142 6.26907029 0.011292962 0.089881919 1.65E-05 4.78270341 0.147520441 APESDT(ph)GDEDQDQER ddPTM_A459_MK2206_30min_R1 3 APESDTGDEDQDQER 15 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 APES(0.118)DT(0.882)GDEDQDQER;APES(0.126)DT(0.874)GDEDQDQER;APES(0.407)DT(0.593)GDEDQDQER 315.47 9.23E-95 6008710 569.45 407.24 423.68 300.824 323.52 452.94 639.19 370.28 433.89 506.2 TRUE FALSE 521.0152872 380.728602 394.921782 323.9935166 310.6335133 478.5850714 596.5508014 367.042681 478.9944182 568.9118776 0.915810177 0.669222452 0.694170394 0.56949684 0.546013408 0.841228827 1.048582082 0.645166142 0.841948353 1 9.152061391 -6.892733474 8.12803332 0.866982641 0.673617939 0.340848853 0.136668031 0.310852155 21.44945869 0.049398803 0.043575588 1.28E-07 6.892733474 -0.193364702 APETDDSFS(ph)DVDCHSNQEDTGCK ddPTM_A459_MK2206_30min_R2 2 APETDDSFSDVDCHSNQEDTGCK 23 0 Q68D20 Q68D20 PMS2CL Protein PMS2CL 1 APET(0.012)DDS(0.166)FS(0.746)DVDCHS(0.076)NQEDTGCK;APET(0.025)DDS(0.134)FS(0.839)DVDCHS(0.001)NQEDTGCK 81.055 0.00034566 22281000 74574 59219 61334 69860 66071 48679 78081 54093 48677 84034 TRUE FALSE 80283.44278 56278.27057 63378.84495 64152.21453 63476.72056 50531.51346 67828.87091 61163.14083 52910.83747 81291.97746 0.987593675 0.692297965 0.779644522 0.789158002 0.780848523 0.62160517 0.834385791 0.7523884 0.650874036 1 16.31082536 -4.751079281 24.77177218 0.758176177 0.987594211 0.300108768 0.100379436 448.2990968 1071835.857 0.02301677 0.313233973 1.77E-05 4.751079281 0.229418033 APEYLHR ddPTM_A459_MK2206_30min_R2 1 APEYLHR 7 0 Q9UN86-2;Q9UN86;D6RAC7;D6RB17;D6R9X5;D6R9A4;D6RBM9;D6REX8;D6RBR0;D6RE13;D6RBW8;D6RGJ4 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 0 102.77 0.026783 3573200 19086 23856 19876 20275 21935 24364 24141 18793 19076 22189 FALSE TRUE 20547.23883 22671.34573 20538.65592 18618.46764 21073.72169 25291.18909 20971.2577 21249.30963 20735.196 21464.97475 0.957244957 1.056201836 0.956845101 0.867388285 0.981772489 1.178253848 0.976998946 0.989952696 0.966001416 1 14.38969686 -6.53580585 24.99762331 1.025588798 0.960952983 0.152927403 0.070000205 464.2878524 897803.9574 0.024377647 0.024391021 2.91E-07 6.53580585 -0.064635815 APFHT(ph)PPEEPNECDFK ddPTM_A459_MK2206_30min_R2 2 APFHTPPEEPNECDFK 16 0 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 APFHT(1)PPEEPNECDFK;APFHT(1)PPEEPNECDFK 112.62 0.0032732 6594700 35829 44337 40811 47697 41655 36869 47792 33083 32818 40669 TRUE FALSE 38572.09579 42135.28905 42171.61837 43800.00252 40019.4154 38272.07563 41516.85299 37407.06169 35672.45032 39341.97386 0.980431127 1.071000891 1.071924315 1.113314819 1.017219307 0.972805172 1.055281393 0.950818122 0.906727518 1 15.26378172 -7.274152425 1.00577622 0.951614349 1.056688731 0.387994341 0.047393575 0.554918522 1.088108588 0.035901348 0.020249291 5.32E-08 7.274152425 0.105074381 APGASPGNPLS(ph)PSLSDKDR ddPTM_A459_MK2206_30min_R1 2 APGASPGNPLSPSLSDKDR 19 1 Q7Z5J4-3;Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 APGASPGNPLS(0.863)PS(0.124)LS(0.013)DKDR;APGASPGNPLS(0.949)PS(0.039)LS(0.012)DKDR 90.084 0.0015239 21425600 4636.5 5029.7 4734 4382.1 3895.3 3498.8 4161.6 4113.6 4473 3254.9 TRUE FALSE 4242.141328 4702.265616 4412.66927 4719.610101 3740.141953 3696.899032 3883.987257 4077.635229 4937.984357 3658.141585 1.159643833 1.285424718 1.206259836 1.290166056 1.022415854 1.010594846 1.061737816 1.114673977 1.349861464 1 11.8368952 -6.257173006 24.97195447 1.093242925 1.236869135 0.326690273 0.099972622 458.4383959 2683330.749 0.030807734 0.038373989 5.53E-07 6.257173006 0.14362621 APGASPGNPLS(ph)PSLSDKDR ddPTM_A459_MK2206_30min_R2 3 APGASPGNPLSPSLSDKDR 19 1 Q7Z5J4-3;Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 APGASPGNPLS(0.949)PS(0.039)LS(0.012)DKDR;APGASPGNPLS(0.767)PS(0.116)LS(0.116)DKDR;APGASPGNPLS(0.939)PS(0.048)LS(0.013)DKDR 109.41 0.00038405 37837300 129282 139735 121307 142931 136359 114702 136365 118602 104970 142828 TRUE FALSE 139179.9293 132795.9631 125351.3148 131253.0801 131004.8605 119067.065 118460.1117 134103.6886 114100.1009 138167.5341 1.007327302 0.96112277 0.907241456 0.949956015 0.948159504 0.861758631 0.857365752 0.970587552 0.82580978 1 17.07605913 -2.656678771 0.613308579 0.905844275 2.432646606 0.239460609 0.051974083 55.46537552 1.782762674 0.022246152 101.6162749 0.002204556 2.656678771 1.526802331 APGLGVLS(ph)PSGEER ddPTM_A459_MK2206_30min_R1 1 APGLGVLSPSGEER 14 0 Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746 Q15746-4 MYLK "Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form" 1 APGLGVLS(0.567)PS(0.433)GEER 169.17 0.00018267 14546000 1048.3 1011.2 1007.9 720.08 1027.6 931.06 1084.8 956.99 886.56 822.12 TRUE FALSE 959.1365802 945.3706962 939.4865562 775.5406864 986.668516 983.7758126 1012.434971 948.6231373 978.7210846 923.9704323 1.038059819 1.0231612 1.016792879 0.839356606 1.06785724 1.064726509 1.095743907 1.02668127 1.059255849 1 9.851702875 APGLGVLS(ph)PSGEER ddPTM_A459_MK2206_30min_R2 3 APGLGVLSPSGEER 14 0 Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746 Q15746-4 MYLK "Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form" 1 APGLGVLS(0.5)PS(0.5)GEER;APGLGVLS(0.5)PS(0.5)GEER;APGLGVLS(0.868)PS(0.132)GEER 161.04 0.00028616 25719900 32857.7 31528.7 25946.2 33933.7 40279 39359.7 33729.4 29475.6 33444.8 37387.7 TRUE FALSE 35373.31078 29963.03061 26811.23336 31161.20816 38697.44407 40857.56096 29300.68926 33328.16212 36353.76825 36167.74241 0.978034802 0.828446251 0.741302375 0.861574599 1.069943588 1.129668546 0.81013321 0.921488595 1.005143419 1 15.14241593 -6.118370367 7.045247748 0.983142141 0.839939373 0.325605788 0.096169484 0.326275009 17.65322285 0.030454115 0.039504818 7.61E-07 6.118370367 -0.143202769 APGLGVLSPS(ph)GEER ddPTM_A459_MK2206_30min_R1 1 APGLGVLSPSGEER 14 0 Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746 Q15746-4 MYLK "Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form" 1 APGLGVLS(0.122)PS(0.878)GEER 104.7 0.0060771 18731000 1780.7 1458.1 1257.2 884.59 1514.1 1322.7 1361 1166.7 1194.7 1065.7 TRUE FALSE 1629.242114 1363.177425 1171.864767 952.7212751 1453.790191 1397.590131 1270.210173 1156.499665 1318.89334 1197.726962 1.360278399 1.138137045 0.97840727 0.795441119 1.213790987 1.166868724 1.060517308 0.965578719 1.101163606 1 10.22608335 -4.837514347 3.075342082 1.038043161 1.390148571 0.444100038 0.11032606 0.318441323 4.777026667 0.030052589 0.257684233 1.45E-05 4.837514347 0.352105409 APGPPYSPVPAES(ph)ESLVNGNHTPQTATR ddPTM_A459_MK2206_30min_R2 1 APGPPYSPVPAESESLVNGNHTPQTATR 28 0 Q86UU1-3;Q86UU1-2;Q86UU1;A0A087WXY7;A0A087WTZ7 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 APGPPY(0.024)S(0.028)PVPAES(0.706)ES(0.242)LVNGNHTPQTATR 68.024 0.00046773 6702900 5565.6 6449.9 7564.5 6898.2 7322.3 5688.9 5216.4 4968.8 6887.1 6665.6 TRUE FALSE 5991.706615 6129.607345 7816.696655 6334.594994 7034.78971 5905.395076 4531.480414 5618.23922 7486.127509 6448.102018 0.929220195 0.950606446 1.212247671 0.982396832 1.090986106 0.915834622 0.702761898 0.87130123 1.160981555 1 12.65465885 -6.810500367 9.957226654 0.907687443 1.035595758 0.122292591 0.131035402 0.771565375 150.8429955 0.047681035 0.042130624 1.55E-07 6.810500367 0.127908315 APGS(ph)PAAPR ddPTM_A459_MK2206_30min_R1 4 APGSPAAPR 9 0 Q5SPY9;Q9NQX5 Q5SPY9 NPDC1 Neural proliferation differentiation and control protein 1 1 APGS(1)PAAPR;APGS(1)PAAPR;APGS(1)PAAPR;APGS(1)PAAPR 118.23 0.0072794 33985900 2568.85 2739.08 2760.36 2202.96 3028.78 2547.22 2950.72 2958.92 1878.5 2660.04 TRUE FALSE 2350.355818 2560.765394 2572.994454 2372.632361 2908.137279 2691.441395 2753.882853 2933.050474 2073.776797 2989.585837 0.786181078 0.856561923 0.860652476 0.793632459 0.972755906 0.900272326 0.92115865 0.981089232 0.693666919 1 11.54572992 -6.249365698 24.58997822 0.910467467 0.829164159 0.208462846 0.083039919 1054.478466 2147611.95 0.023621491 0.030246596 5.63E-07 6.249365698 -0.081303309 APGS(ph)PAAPR ddPTM_A459_MK2206_30min_R2 3 APGSPAAPR 9 0 Q5SPY9;Q9NQX5 Q5SPY9 NPDC1 Neural proliferation differentiation and control protein 1 1 APGS(1)PAAPR;APGS(1)PAAPR;APGS(1)PAAPR 113.44 0.0091106 35090500 19427.1 19064.9 22958.2 17667.6 18014 21043.7 24486.8 8532.1 16548.8 19902.7 TRUE FALSE 20914.45371 18118.16479 23723.61493 16224.10056 17306.67985 21844.53275 21271.65375 9647.274765 17988.18471 19253.27653 1.086280233 0.941043191 1.232185851 0.842666989 0.898895303 1.134587805 1.104832921 0.501071844 0.934292129 1 14.23281636 -7.71393637 24.99997389 0.788256722 1.029648419 0.27501631 0.164146338 132.9675229 69978.16973 0.074582248 0.043059925 1.93E-08 7.71393637 0.241391698 APGTPHSHTKPYVR ddPTM_A459_MK2206_30min_R1 1 APGTPHSHTKPYVR 14 1 F8VUA6;H0YHA7;J3QQ67;Q07020-2;Q07020;F8VYV2 F8VUA6 RPL18 60S ribosomal protein L18 0 125.82 0.0010739 3724300 2285.1 2002.4 2364.2 1722.8 2598.7 2359.4 2380.5 2589.8 1848.1 1692.1 FALSE TRUE 2090.740245 1872.043396 2203.724691 1855.490355 2495.188276 2492.987189 2221.701188 2567.157652 2040.216608 1901.730123 1.09938851 0.984389622 1.158799908 0.975685421 1.312062236 1.310904823 1.168252615 1.349906394 1.072821314 1 10.89309681 -6.259935522 24.99787173 1.223545298 1.056998565 0.274588711 0.114553867 152.5910836 2536443.87 0.032499422 0.03972584 5.50E-07 6.259935522 -0.166546733 APGTPHSHTKPYVR ddPTM_A459_MK2206_30min_R2 1 APGTPHSHTKPYVR 14 1 F8VUA6;H0YHA7;J3QQ67;Q07020-2;Q07020;F8VYV2 F8VUA6 RPL18 60S ribosomal protein L18 0 77.74 0.016448 6184200 19356 26552 20458 29292 25516 25717 28313 20909 25830 25313 FALSE TRUE 20837.91024 25233.46629 21140.05951 26898.7499 24514.11363 26695.67846 24595.46909 23641.87809 28076.64671 24487.03888 0.850977137 1.030482551 0.863316288 1.098489288 1.001105677 1.09019627 1.004428065 0.965485382 1.146592156 1 14.5797307 -5.76311568 24.99980736 1.040837745 0.926481049 0.418957662 0.069065861 44.68649506 666459.2253 0.01805812 0.028441382 1.73E-06 5.76311568 -0.114356697 APGYPS(ph)SPVTTASGTTLR ddPTM_A459_MK2206_30min_R1 3 APGYPSSPVTTASGTTLR 18 0 Q9HCK8-2;Q9HCK8;H0YJG4;H0YJA4 Q9HCK8-2 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 APGYPS(0.562)S(0.429)PVT(0.008)T(0.002)ASGTTLR;APGYPS(0.829)S(0.17)PVT(0.001)TASGTTLR;APGYPS(0.984)S(0.016)PVTTASGTTLR 244 1.88E-25 88086000 7876.6 8069.2 7012.4 5857.1 8069.1 7320.5 7137.8 6356.93 5627.4 4959.9 TRUE FALSE 7206.653808 7543.893613 6536.417826 6308.214857 7747.69066 7734.980384 6661.650386 6301.352031 6212.388368 5574.369857 1.292819456 1.353317739 1.172584165 1.13164627 1.389877396 1.387597268 1.195049944 1.130415131 1.114455719 1 12.44459301 -7.894266583 1.619064131 1.047002197 1.282222219 0.552981088 0.084084058 0.340268964 1.636428629 0.077192502 0.027429328 1.28E-08 7.894266583 0.235220022 APGYPS(ph)SPVTTASGTTLR ddPTM_A459_MK2206_30min_R2 3 APGYPSSPVTTASGTTLR 18 0 Q9HCK8-2;Q9HCK8;H0YJG4;H0YJA4 Q9HCK8-2 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 APGYPS(0.924)S(0.074)PVT(0.001)TASGTTLR;APGYPS(0.987)S(0.004)PVT(0.003)T(0.004)AS(0.001)GTTLR;APGYPS(0.915)S(0.085)PVTTASGTTLR 213.71 4.64E-12 87402800 50249.9 61665 45358.4 68075 55457 77119 64405 50389.6 61779 53295.7 TRUE FALSE 54097.07098 58602.80577 46870.62642 62513.05474 53279.47953 80053.81758 55948.54614 56975.69373 67152.42575 51556.66567 1.049274042 1.136667878 0.909108954 1.212511591 1.033415929 1.552734579 1.085185502 1.105108195 1.302497453 1 15.65387134 -5.79558935 24.99438114 1.19378357 1.042181873 0.161021012 0.158312459 319.1701527 233599.4859 0.043689014 0.064805158 1.60E-06 5.79558935 -0.151601697 APGYPSS(ph)PVTTASGTTLR ddPTM_A459_MK2206_30min_R2 3 APGYPSSPVTTASGTTLR 18 0 Q9HCK8-2;Q9HCK8;H0YJG4;H0YJA4 Q9HCK8-2 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 APGYPS(0.206)S(0.747)PVT(0.023)T(0.023)ASGTTLR;APGYPS(0.012)S(0.66)PVT(0.184)T(0.122)AS(0.008)GT(0.011)T(0.003)LR;APGYPS(0.27)S(0.638)PVT(0.067)T(0.018)AS(0.007)GTTLR 203.06 9.24E-11 90684400 67019.1 76888 74908 79559 72365.3 70400 71235 61295.6 61853 73779 TRUE FALSE 72150.13382 73069.85373 77405.39533 73058.7752 69523.87472 73079.12133 61881.75893 69307.14538 67232.86214 71371.59727 1.010908213 1.02379457 1.084540606 1.023639347 0.974111234 1.02392442 0.867036206 0.971074601 0.942011454 1 16.12306244 -6.644998932 1.483820449 0.946896443 1.03784543 0.427179672 0.042064036 0.355161469 1.622258491 0.017808627 0.017791448 2.26E-07 6.644998932 0.090948987 APIDT(ph)SDVEEK ddPTM_A459_MK2206_30min_R2 2 APIDTSDVEEK 11 0 D6RIY6;Q06265-3;Q06265-4;Q06265;Q06265-2 D6RIY6 EXOSC9 Exosome complex component RRP45 1 APIDT(0.524)S(0.476)DVEEK;APIDT(0.5)S(0.5)DVEEK 174.72 0.00027081 110135000 505570 321121 380821 313298 277371 200126 369563 278245 189177 438840 TRUE FALSE 544276.8279 305174.5981 393517.3821 287700.5512 266480.0209 207741.9352 321038.9342 314612.5769 205631.2735 424520.6867 1.282097304 0.718868615 0.926968683 0.677706788 0.627719754 0.489356448 0.75623861 0.741100697 0.484384578 1 18.69547533 -2.001619685 1.005843646 0.676918527 199.9999978 0.527915738 0.158553965 428.8474218 1.70589369 0.048093484 195539.8056 0.009962775 2.001619685 199.3230793 APIDTS(ph)DVEEK ddPTM_A459_MK2206_30min_R1 5 APIDTSDVEEK 11 0 D6RIY6;Q06265-3;Q06265-4;Q06265;Q06265-2 D6RIY6 EXOSC9 Exosome complex component RRP45 1 APIDT(0.229)S(0.771)DVEEK;APIDT(0.112)S(0.888)DVEEK;APIDT(0.136)S(0.864)DVEEK;APIDT(0.043)S(0.957)DVEEK;APIDT(0.086)S(0.914)DVEEK 195.77 1.98E-05 157566800 17026.7 19428 19932.7 12510.2 12691.4 12463.4 18437.6 14499.7 23552.2 29681.3 TRUE FALSE 15578.48975 18163.23367 18579.72386 13473.73777 12185.87466 13169.06694 17207.66135 14372.93065 26000.53547 33358.44353 0.467002897 0.544486845 0.556972145 0.403907867 0.365301057 0.394774622 0.515841254 0.430863348 0.779428916 1 15.02576436 -8.453840857 2.832377563 0.997834155 0.459657833 0.890404052 0.062537043 0.079272928 1.339034341 0.066851069 0.018012135 3.52E-09 8.453840857 -0.538176323 down APIDTS(ph)DVEEK ddPTM_A459_MK2206_30min_R2 2 APIDTSDVEEK 11 0 D6RIY6;Q06265-3;Q06265-4;Q06265;Q06265-2 D6RIY6 EXOSC9 Exosome complex component RRP45 1 APIDT(0.036)S(0.964)DVEEK;APIDT(0.035)S(0.965)DVEEK 199.96 1.92E-05 119754000 363710 240625 288641 220893 219662 166343 293051 224589 166598 314454 TRUE FALSE 391555.9172 228675.9124 298264.1469 202845.3353 211036.9662 172673.2994 254573.0517 253943.5534 181088.3929 304193.3917 1.287194028 0.751745168 0.980508305 0.666830184 0.693759207 0.567643164 0.836878968 0.834809566 0.595306794 1 18.21462929 -2.454948502 1.24518067 0.746296762 199.9962786 0.530398865 0.142948872 423.2509448 2.331397735 0.040316045 239049.317 0.003507935 2.454948502 199.2499818 APIRPDIVNFVHTNLR ddPTM_A459_MK2206_30min_R1 2 APIRPDIVNFVHTNLR 16 1 P36578;H3BU31;H3BTP7 P36578 RPL4 60S ribosomal protein L4 0 ; 105.63 0.0028946 19998400 8419.9 8044.7 8408.9 7161.6 8523.9 8294.5 8985.4 7625.4 8179.5 7390.1 FALSE TRUE 7703.74329 7520.988568 7838.127297 7713.187673 8184.375013 8764.127422 8386.000361 7558.731932 9029.788296 8305.64138 0.927531414 0.905527728 0.943711261 0.928668518 0.985399518 1.055201762 1.009675229 0.910072032 1.087187356 1 13.01987587 -6.333461833 3.628662774 1.007710571 0.925425831 0.46285893 0.043589852 0.230687312 5.938507767 0.013830462 0.016182812 4.64E-07 6.333461833 -0.08228474 APKPDGPGGGPGGSHMGGNYGDDR ddPTM_A459_MK2206_30min_R1 2 APKPDGPGGGPGGSHMGGNYGDDR 24 1 H3BPE7;P35637-2;P35637 H3BPE7 FUS RNA-binding protein FUS 0 ; 91.481 3.43E-05 18466000 9935.4 11213.6 10217.7 7675.6 9859.4 8582.3 10195.3 9518 9885.9 10783.2 FALSE TRUE 9090.342057 10483.5926 9524.150992 8266.776042 9466.67922 9068.222409 9515.190139 9434.785129 10913.57468 12119.10423 0.75008366 0.865046823 0.785879122 0.682127646 0.781136877 0.748258472 0.785139723 0.778505156 0.900526514 1 13.56499545 -8.460678709 2.194754288 0.9995832 0.770921415 0.752264978 0.042830547 0.148112768 1.562162305 0.04278963 0.011880192 3.46E-09 8.460678709 -0.228661784 APKPDGPGGGPGGSHMGGNYGDDR ddPTM_A459_MK2206_30min_R2 3 APKPDGPGGGPGGSHMGGNYGDDR 24 1 H3BPE7;P35637-2;P35637 H3BPE7 FUS RNA-binding protein FUS 0 ;; 75.956 0.0003215 26984200 107606 118724 97650 113036 101297 105365 113890 95683 87614 123160 FALSE TRUE 115844.3981 112828.3388 100905.6023 103800.5972 97319.5708 109374.7389 98936.10619 108189.0966 95234.50735 119141.2993 0.972327806 0.947012828 0.84694059 0.871239426 0.816841611 0.9180254 0.830409831 0.908073836 0.799340849 1 16.86231407 -5.15117187 4.551922087 0.868590711 0.966198609 0.276006454 0.055508486 0.244538969 8.028426636 0.01292697 0.037711783 7.06E-06 5.15117187 0.097607898 APKPPTDGS(ph)TSPTSTPSEDQEALGK ddPTM_A459_MK2206_30min_R2 1 APKPPTDGSTSPTSTPSEDQEALGK 25 1 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;S4R3G4;F8WBN2;F6SRV7;Q8NHM5-5 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 APKPPT(0.001)DGS(0.225)T(0.182)S(0.182)PT(0.182)S(0.182)T(0.043)PS(0.002)EDQEALGK 64.954 0.0012797 13272000 46864 50057 52663 49870 51909 38431 57200 44862 42417 49886 TRUE FALSE 50451.94387 47571.24217 54418.75814 45795.46147 49870.79184 39893.51863 49689.57129 50725.61743 46106.35399 48258.22391 1.045457951 0.985764463 1.127657707 0.94896699 1.033415402 0.826667776 1.029660175 1.051128975 0.95540926 1 15.5584872 -5.796627046 24.9999621 0.978192415 1.046240828 0.202342236 0.067906908 303.6203946 215713.2975 0.019179329 0.028448722 1.60E-06 5.796627046 0.068048412 APKPPTDGST(ph)SPTSTPSEDQEALGK ddPTM_A459_MK2206_30min_R2 1 APKPPTDGSTSPTSTPSEDQEALGK 25 1 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;S4R3G4;F8WBN2;F6SRV7;Q8NHM5-5 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 APKPPTDGS(0.014)T(0.343)S(0.343)PT(0.239)S(0.057)T(0.003)PSEDQEALGK 97.5 8.37E-06 15794000 38229 48064 44726 47525 41624 36348 51268 35330 35292 43698 TRUE FALSE 41155.84163 45677.21165 46217.14252 43642.05548 39989.63262 37731.24861 44536.45002 39947.75231 38361.63437 42272.13784 0.973592625 1.080551256 1.093323993 1.032407106 0.9460045 0.892579617 1.053565121 0.945013769 0.907492176 1 15.36741946 -6.172766231 4.554615565 0.956337298 1.053392007 0.406682325 0.0518324 0.222456182 8.076667194 0.015757448 0.020548738 6.72E-07 6.172766231 0.097054708 APKPPTDGSTS(ph)PTSTPSEDQEALGK ddPTM_A459_MK2206_30min_R1 1 APKPPTDGSTSPTSTPSEDQEALGK 25 1 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;S4R3G4;F8WBN2;F6SRV7;Q8NHM5-5 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 APKPPTDGS(0.038)T(0.35)S(0.487)PT(0.109)S(0.011)T(0.004)PSEDQEALGK 84.602 5.84E-05 4268700 1457.3 1706.8 1698.7 1265.2 1758.8 1186.2 1614.3 1277.9 1540.4 1398.3 TRUE FALSE 1333.348982 1595.68701 1583.396977 1362.645923 1688.743272 1253.361619 1506.612992 1266.727455 1700.530092 1571.531961 0.848438986 1.015370384 1.007549968 0.867081267 1.074584109 0.797541285 0.958690647 0.806046257 1.08208432 1 10.6179559 -6.754073741 24.99999363 0.918614025 0.96272639 0.02227035 0.100888442 630.6587911 2140538.777 0.03159968 0.030987544 1.76E-07 6.754073741 0.044112365 APLATGEDDDDEVPDLVENFDEASK ddPTM_A459_MK2206_30min_R1 1 APLATGEDDDDEVPDLVENFDEASK 25 0 P20290;P20290-2 P20290 BTF3 Transcription factor BTF3 0 135.68 6.11E-08 2282900 421.87 506.85 395.23 310.46 392.16 603.32 330.3 389.33 527.1 536.07 FALSE TRUE 385.9877412 473.8539729 368.4028888 334.371683 376.5394368 637.479457 308.2662897 385.9261289 581.8939312 602.4823987 0.64066227 0.7865026 0.61147494 0.554989961 0.624979979 1.058088101 0.511660242 0.640560006 0.965827271 1 9.234775284 -8.269638914 20.47938402 0.982914807 0.681148339 0.413921062 0.14481193 56.89950779 142091.0032 0.130153526 0.036652045 5.37E-09 8.269638914 -0.301766467 APLATGEDDDDEVPDLVENFDEASKNEAN ddPTM_A459_MK2206_30min_R1 4 APLATGEDDDDEVPDLVENFDEASKNEAN 29 1 P20290;P20290-2 P20290 BTF3 Transcription factor BTF3 0 ;;; 161.68 1.40E-18 16343600 7231.64 7016.89 7487.23 7189.89 7095.65 6167.69 6629.55 6659.67 5692.41 4641.27 FALSE TRUE 6616.551043 6560.089186 6979.017688 7743.656574 6813.015235 6516.899278 6187.304816 6601.445207 6284.15639 5216.265567 1.268445971 1.25762178 1.337933738 1.484521153 1.306109734 1.249341927 1.186156022 1.265550061 1.204723247 1 12.34880161 -8.829688336 0.462989771 0.985297723 1.331946662 0.6582824 0.067865734 1.107582127 0.504096314 0.118474083 0.046167458 1.48E-09 8.829688336 0.34664894 APLATGEDDDDEVPDLVENFDEASKNEAN ddPTM_A459_MK2206_30min_R2 3 APLATGEDDDDEVPDLVENFDEASKNEAN 29 1 P20290;P20290-2 P20290 BTF3 Transcription factor BTF3 0 ;; 132.53 2.67E-13 6576200 44165.2 59845.7 49817 60601.8 63125.2 47313.5 63127.9 46346.9 56823 59854.4 FALSE TRUE 47546.52167 56873.84956 51477.87392 55650.43908 60646.58747 49114.0484 54839.1309 52404.59896 61765.36183 57901.35583 0.82116422 0.982254193 0.889061632 0.961124973 1.047412217 0.848236586 0.94711307 0.905066871 1.066734292 1 15.82130951 -4.753950111 24.67035707 0.954344591 0.821163938 0.289189067 0.0649644 303.2690535 998898.0518 0.015576088 0.157466315 1.76E-05 4.753950111 -0.133180653 APLKPYPVS(ph)PSDK ddPTM_A459_MK2206_30min_R1 1 APLKPYPVSPSDK 13 1 J3KR24;A0A0A0MSX9;P41252;Q5TCC6 J3KR24 IARS "Isoleucine--tRNA ligase, cytoplasmic" 1 APLKPYPVS(0.618)PS(0.382)DK 140.03 0.0042878 9920100 2141.2 2364.2 2524.4 1644 1686.2 1486.6 2504.7 1773.2 2153.8 2568.3 TRUE FALSE 1959.079696 2210.29015 2353.050761 1770.621165 1619.035083 1570.770007 2337.616033 1757.697099 2377.695217 2886.480394 0.678708818 0.765738841 0.815197209 0.61341874 0.560902851 0.544181769 0.809849961 0.608941292 0.823735101 1 11.49509571 -8.540916124 3.847286998 0.999676579 0.677299184 0.553640286 0.092083766 0.159311091 7.157515413 0.094823615 0.024895554 2.88E-09 8.540916124 -0.322377395 APLKPYPVS(ph)PSDKVLIQEK ddPTM_A459_MK2206_30min_R1 1 APLKPYPVSPSDKVLIQEK 19 2 J3KR24;A0A0A0MSX9;P41252;Q5TCC6 J3KR24 IARS "Isoleucine--tRNA ligase, cytoplasmic" 1 APLKPY(0.002)PVS(0.831)PS(0.167)DKVLIQEK 52.365 0.02851 14580000 5332 5910.7 6337.9 6124.7 5999.9 5115.8 5112.3 6812.6 3675.3 3895 TRUE FALSE 4878.485401 5525.912356 5907.701006 6596.425455 5760.911278 5405.452175 4771.267795 6753.038156 4057.360587 4377.542006 1.114434857 1.262332229 1.349547531 1.506878848 1.316015077 1.234814462 1.089942207 1.54265525 0.926858173 1 12.09590531 -6.892852925 4.00803924 1.182469555 1.320071417 0.149768237 0.178500847 0.522925035 15.53316814 0.064769444 0.056698573 1.28E-07 6.892852925 0.137601862 APLKPYPVSPS(ph)DK ddPTM_A459_MK2206_30min_R1 1 APLKPYPVSPSDK 13 1 J3KR24;A0A0A0MSX9;P41252;Q5TCC6 J3KR24 IARS "Isoleucine--tRNA ligase, cytoplasmic" 1 APLKPYPVS(0.053)PS(0.947)DK 126.09 0.0097938 10299000 2321.8 2192.6 2907 2076.8 1826.5 2198.2 2538.3 2030.3 2545.3 2756.9 TRUE FALSE 2124.318718 2049.861341 2709.680939 2236.755496 1753.746637 2322.660184 2368.974638 2012.549301 2809.893043 3098.445586 0.685607883 0.661577325 0.874529136 0.721896007 0.566008532 0.749621099 0.76456874 0.649535145 0.906871838 1 11.59732892 -8.430887009 4.034353315 0.997681303 0.712453532 0.623188008 0.077375806 0.138619794 3.856271758 0.076403795 0.020068763 3.71E-09 8.430887009 -0.285227771 APLKPYPVSPS(ph)DK ddPTM_A459_MK2206_30min_R2 1 APLKPYPVSPSDK 13 1 J3KR24;A0A0A0MSX9;P41252;Q5TCC6 J3KR24 IARS "Isoleucine--tRNA ligase, cytoplasmic" 1 APLKPYPVS(0.125)PS(0.875)DK 107.11 0.031953 5796400 18980 24248 21821 22255 17134 15316 25837 25275 15831 23771 TRUE FALSE 20433.12339 23043.87958 22548.50125 20436.69531 16461.23307 15898.86111 22444.57086 28578.52928 17207.95176 22995.35422 0.888576153 1.002110225 0.980567685 0.888731485 0.715850381 0.691394486 0.97604806 1.242795784 0.74832297 1 14.4890548 -7.506395019 24.92690814 1.019219999 0.864849726 0.15938438 0.144704056 1197.97622 1811603.757 0.064279062 0.04202762 3.12E-08 7.506395019 -0.154370273 APLS(ph)PSLLIR ddPTM_A459_MK2206_30min_R2 1 APLSPSLLIR 10 0 O75807 O75807 PPP1R15A Protein phosphatase 1 regulatory subunit 15A 1 APLS(0.828)PS(0.172)LLIR 86.014 0.035655 1818200 8296.9 12417 7647.7 10218 10100 9875.6 9191.4 7922.4 7896.6 7416.9 TRUE FALSE 8932.117043 11800.38984 7902.670501 9383.156714 9703.423252 10251.42288 7984.558139 8957.884882 8583.431994 7174.88716 1.24491394 1.644679501 1.101434813 1.3077776 1.352414754 1.428792209 1.112847904 1.248505333 1.196315956 1 12.80874043 -9.080911358 0.217968495 0.874441507 1.425926358 0.343653735 0.141710002 6.612558927 0.745617713 1.08400187 0.424014721 8.30E-10 9.080911358 0.55148485 APNPTAT(ph)SPPASAPR ddPTM_A459_MK2206_30min_R2 1 APNPTATSPPASAPR 15 0 Q8IV32 Q8IV32 CCDC71 Coiled-coil domain-containing protein 71 1 APNPT(0.074)AT(0.462)S(0.462)PPAS(0.001)APR 113.52 0.0062849 0 8872.6 11717 9862.9 11391 8906.6 10336 15202 9276.6 8790.4 9638.6 TRUE FALSE 9551.893078 11135.15082 10191.72416 10460.31886 8556.882132 10729.34372 13205.95914 10489.08347 9554.973103 9324.093271 1.024431309 1.194234173 1.093052575 1.121859097 0.917717346 1.150711754 1.416326366 1.124944074 1.024761639 1 13.18674772 -6.977190431 24.93724313 1.170719977 1.076572924 0.058816086 0.125294656 535.4644123 585410.452 0.045225292 0.039882864 1.05E-07 6.977190431 -0.094147053 APPGLTPAPAS(ph)PPVLPR ddPTM_A459_MK2206_30min_R2 2 APPGLTPAPASPPVLPR 17 0 C9J069 C9J069 C9orf172 Uncharacterized protein C9orf172 1 APPGLT(0.017)PAPAS(0.983)PPVLPR;APPGLT(0.089)PAPAS(0.911)PPVLPR 152.68 0.00015978 11146700 23395.6 23486.9 18045.8 27898.7 23087.6 33018.2 19542.5 17776.7 25524 22167 TRUE FALSE 25186.78512 22320.5747 18647.43797 25619.28697 22181.06482 34274.73074 16976.54628 20100.17573 27744.03138 21443.69261 1.174554476 1.040892309 0.869600134 1.194723662 1.034386438 1.598359544 0.791680173 0.937346757 1.293808482 1 14.38826574 -3.878315789 4.156803688 1.085353722 44.16050654 0.014621119 0.220280988 13577.0154 443.1786895 0.055146169 5557841.218 0.000132338 3.878315789 43.07515282 APPPPIS(ph)PTQLSDVSSPR ddPTM_A459_MK2206_30min_R2 2 APPPPISPTQLSDVSSPR 18 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 APPPPIS(0.655)PT(0.274)QLS(0.071)DVS(0.001)SPR;APPPPIS(0.975)PT(0.024)QLSDVSSPR 149.95 0.00015664 17100300 17358.6 26857.7 25334.4 35651.7 28991 36422.4 34760.3 24502.5 38620.7 28937.4 TRUE FALSE 18687.58776 25523.98567 26179.03625 32738.84207 27852.66767 37808.47995 30196.23086 27705.06088 41979.85868 27993.17501 0.66757657 0.911793166 0.935193534 1.169529432 0.994980657 1.350632072 1.078699749 0.989707701 1.499646205 1 14.77278751 -4.296818539 0.63413789 1.173487916 0.000782307 0.494651002 0.158066035 4.867831338 0.953039292 0.069045076 4.75323007 5.05E-05 4.296818539 -1.172705609 APPQTHLPSGAS(ph)SGTGSASATHGGGSPPGTR ddPTM_A459_MK2206_30min_R1 1 APPQTHLPSGASSGTGSASATHGGGSPPGTR 31 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;P46379-4;A0A0G2JJR8;A0A1B0GX79;F6X9W3;F6VEM6;F6U341;F6TC96;F6S6P2;X6REW1;A0A0G2JJM1;F6XTU0;F6U1F2;F6UR09;F6WML8 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 APPQT(0.005)HLPS(0.276)GAS(0.662)S(0.027)GT(0.001)GS(0.002)AS(0.008)AT(0.018)HGGGSPPGTR 66.633 0.00022159 7419000 492.49 498.23 724.04 518.73 762.88 611.23 721.38 592.43 660.66 642.4 TRUE FALSE 450.6011393 465.7951364 674.8941821 558.6826745 732.4928742 645.8373144 673.2580564 587.250447 729.3379712 721.9853619 0.624113955 0.645158699 0.934775437 0.773814407 1.014553636 0.894529652 0.932509289 0.813382761 1.010183876 1 9.495825777 -5.256907666 22.72752797 0.912501329 0.634636171 0.693013655 0.076231229 55.43635552 278014.2747 0.018478739 0.045336829 5.53E-06 5.256907666 -0.277865158 APPQTHLPSGASSGTGSASAT(ph)HGGGSPPGTR ddPTM_A459_MK2206_30min_R1 1 APPQTHLPSGASSGTGSASATHGGGSPPGTR 31 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;P46379-4;A0A0G2JJR8;A0A1B0GX79;F6X9W3;F6VEM6;F6U341;F6TC96;F6S6P2;X6REW1;A0A0G2JJM1;F6XTU0;F6U1F2;F6UR09;F6WML8 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 APPQTHLPSGAS(0.001)S(0.003)GT(0.001)GS(0.003)AS(0.012)AT(0.745)HGGGS(0.195)PPGT(0.041)R 103.06 1.19E-08 57814000 1012.2 182.57 401.09 331.66 1778.9 1858.5 1453.7 938.03 376.02 373.87 TRUE FALSE 926.1070747 170.6846598 373.8651283 357.2045107 1708.042646 1963.726664 1356.726325 929.8289026 415.1086246 420.1878382 2.204031127 0.406210376 0.889757138 0.850106734 4.064950222 4.673449552 3.228856721 2.212888661 0.98791204 1 8.714890595 -6.239988271 24.67854291 2.880968351 1.024734298 0.297251644 1.188523898 824.2554263 948268.7537 0.372379693 0.480250216 5.75E-07 6.239988271 -1.856234053 APPQTHLPSGASSGTGSASATHGGGS(ph)PPGTR ddPTM_A459_MK2206_30min_R1 1 APPQTHLPSGASSGTGSASATHGGGSPPGTR 31 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;P46379-4;A0A0G2JJR8;A0A1B0GX79;F6X9W3;F6VEM6;F6U341;F6TC96;F6S6P2;X6REW1;A0A0G2JJM1;F6XTU0;F6U1F2;F6UR09;F6WML8 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 APPQTHLPSGASSGTGSASAT(0.023)HGGGS(0.908)PPGT(0.068)R 117.37 4.73E-16 4538300 739.36 223.64 460.83 329.8 804.26 1202.5 962 747.36 298.96 371.44 TRUE FALSE 676.4735495 209.0809954 429.5501435 355.2012531 772.2246212 1270.584511 897.8267353 740.8259103 330.0379618 417.4567914 1.620463634 0.500844637 1.028969111 0.850869504 1.849831257 3.04363119 2.150705782 1.77461698 0.790591909 1 8.70548307 -6.268480498 21.01024041 1.88985475 0.966660966 0.244914235 0.638441707 77.67320081 231771.4933 0.203280596 0.236563343 5.39E-07 6.268480498 -0.923193784 APPQTHLPSGASSGTGSASATHGGGS(ph)PPGTR ddPTM_A459_MK2206_30min_R2 7 APPQTHLPSGASSGTGSASATHGGGSPPGTR 31 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;P46379-4;A0A0G2JJR8;A0A1B0GX79;F6X9W3;F6VEM6;F6U341;F6TC96;F6S6P2;X6REW1;A0A0G2JJM1;F6XTU0;F6U1F2;F6UR09;F6WML8 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 APPQT(0.001)HLPS(0.176)GAS(0.131)S(0.131)GT(0.019)GS(0.019)AS(0.044)AT(0.104)HGGGS(0.33)PPGT(0.046)R;APPQTHLPS(0.002)GAS(0.001)SGTGS(0.001)AS(0.012)AT(0.026)HGGGS(0.901)PPGT(0.057)R;APPQTHLPS(0.009)GAS(0.004)S(0.001)GT(0.001)GS(0.003)AS(0.006)AT(0.032)HGGGS(0.818)PPGT(0.125)R;APPQTHLPSGASSGTGSAS(0.001)AT(0.009)HGGGS(0.962)PPGT(0.029)R;APPQTHLPS(0.008)GAS(0.009)S(0.009)GT(0.006)GS(0.005)AS(0.011)AT(0.015)HGGGS(0.681)PPGT(0.256)R;APPQTHLPS(0.001)GAS(0.002)S(0.003)GT(0.003)GS(0.007)AS(0.021)AT(0.313)HGGGS(0.483)PPGT(0.167)R;APPQTHLPSGASSGTGSASAT(0.014)HGGGS(0.742)PPGT(0.243)R 119.09 3.64E-16 260775300 30855.7 85413.2 54345.1 137596.3 122939.8 184181.2 120702.8 73954.5 113903.9 64891.2 TRUE FALSE 33218.03612 81171.70469 56156.93851 126354.2421 118112.5657 191190.3446 104854.3774 83620.60707 123811.0553 62773.80546 0.529170342 1.293082427 0.89459191 2.012849806 1.881558157 3.045702634 1.670352412 1.33209396 1.972336302 1 15.93787505 -5.759262328 24.99328178 1.903099511 0.944361427 0.393299377 0.530576984 58.17386645 667835.952 0.1488013 0.242455857 1.74E-06 5.759262328 -0.958738084 APPS(ph)PGSLAAPGR ddPTM_A459_MK2206_30min_R1 2 APPSPGSLAAPGR 13 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 APPS(0.783)PGS(0.217)LAAPGR;APPS(0.782)PGS(0.218)LAAPGR 111.88 0.0051016 41098000 2720.2 3128.3 2755 2498 2888 2403.9 2715.4 2450.33 2670.4 2428.7 TRUE FALSE 2488.832706 2924.647101 2567.998276 2690.396393 2772.964845 2540.006741 2534.260621 2428.907023 2947.997636 2729.585692 0.911798707 1.071461911 0.940801486 0.985642767 1.015892211 0.93054662 0.928441495 0.889844576 1.080016519 1 11.41446627 -6.76414456 24.99993028 0.956552111 0.987483188 0.012295901 0.062303915 241.1649969 2228716.118 0.020664635 0.019027382 1.72E-07 6.76414456 0.030931077 APPS(ph)PGSLAAPGR ddPTM_A459_MK2206_30min_R2 1 APPSPGSLAAPGR 13 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 APPS(0.5)PGS(0.5)LAAPGR 96.371 0.014238 16565000 49345 44740 49253 51359 31851 35981 41504 27810 32029 56356 TRUE FALSE 53122.89114 42518.27666 50895.07044 47162.80541 30600.3697 37350.28217 36054.47494 31444.86249 34814.82452 54517.10834 0.974426061 0.779907041 0.933561445 0.865101009 0.561298474 0.685111212 0.661342394 0.576788892 0.638603653 1 15.73442142 -6.173274159 6.960557181 0.664949989 0.885785522 0.380410389 0.123882012 0.243152781 16.49854933 0.034136698 0.044213983 6.71E-07 6.173274159 0.220835534 APPSPS(ph)TTSSNNNSSSSSNSGWDQLSK ddPTM_A459_MK2206_30min_R1 1 APPSPSTTSSNNNSSSSSNSGWDQLSK 27 0 E7EPF2;E7ETU5 E7EPF2 RBMS1 1 APPS(0.151)PS(0.78)T(0.057)T(0.005)S(0.002)S(0.005)NNNSSSSSNSGWDQLSK 117.99 5.45E-12 4544100 1595.9 1645.8 1347.8 1627.5 1567.5 1585.1 1571.3 1433.8 1243 1219.5 TRUE FALSE 1460.160325 1538.658121 1256.315091 1752.850332 1505.063156 1674.846992 1466.481444 1421.264438 1372.214298 1370.580867 1.065358754 1.122632132 0.916629673 1.278910551 1.098120653 1.221997937 1.069970754 1.036979628 1.00119178 1 10.42057174 -7.711145469 2.98819648 1.009219489 1.116368354 0.210874628 0.090298404 0.425425702 7.662839674 0.052404603 0.025350075 1.94E-08 7.711145469 0.107148864 APQAGAHTPLTPQPGLAPQQQS(ph)PK ddPTM_A459_MK2206_30min_R1 1 APQAGAHTPLTPQPGLAPQQQSPK 24 0 O15063 O15063 KIAA0355 Uncharacterized protein KIAA0355 1 APQAGAHTPLTPQPGLAPQQQS(1)PK 107.29 3.52E-07 9698600 1770.7 2235.8 2171.7 2085 1689.6 1540.1 1634 1650.7 2033.7 2094.3 TRUE FALSE 1620.092667 2090.249014 2024.291055 2245.587061 1622.299654 1627.299131 1524.998841 1636.268104 2245.110393 2353.757695 0.688300529 0.88804766 0.860025252 0.954043428 0.689238173 0.691362214 0.647899673 0.695172705 0.953840915 1 11.2007501 -1.541102268 19.79356517 0.795266131 0.004021322 0 0.130495005 0 0 0.030387605 0 0.028767209 1.541102268 -0.79124481 APQAGAHTPLTPQPGLAPQQQS(ph)PK ddPTM_A459_MK2206_30min_R2 4 APQAGAHTPLTPQPGLAPQQQSPK 24 0 O15063 O15063 KIAA0355 Uncharacterized protein KIAA0355 1 APQAGAHTPLTPQPGLAPQQQS(1)PK;APQAGAHTPLTPQPGLAPQQQS(1)PK;APQAGAHTPLTPQPGLAPQQQS(1)PK;APQAGAHTPLTPQPGLAPQQQS(1)PK 178.32 2.47E-20 39257400 134146 138646 139317 105751 122902 86569 147515 107707 100674 147796 TRUE FALSE 144416.3209 131761.0413 143961.7592 97110.80502 118076.2499 89863.44396 128146.1033 121784.6747 109430.4425 142973.4286 1.010092031 0.921577125 1.006912687 0.679222748 0.825861498 0.628532482 0.89629314 0.851799358 0.76539007 1 17.12538752 -5.743077606 24.9976416 0.79765767 0.973732329 0.37537987 0.101593648 246.4297131 335485.723 0.026472976 0.045743222 1.81E-06 5.743077606 0.176074659 APQTS(ph)SSPPPVR ddPTM_A459_MK2206_30min_R2 2 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.164)S(0.333)S(0.333)S(0.171)PPPVR;APQT(0.149)S(0.284)S(0.284)S(0.284)PPPVR 117.03 0.0048666 98862000 38690 50448 53809 49552 48276 53998 56698 39859 43009 49290 TRUE FALSE 41652.13615 47942.82568 55602.9652 45503.44309 46380.44167 56052.93173 49253.48449 45068.70816 46749.84508 47681.67134 0.87354606 1.005477038 1.166128696 0.954317284 0.972710066 1.175565582 1.032964724 0.945199841 0.980457349 1 15.54114719 -7.745073969 24.25659367 0.972121456 1.031397211 0.063625773 0.086882313 442.0319725 655176.3863 0.042306269 0.024323401 1.80E-08 7.745073969 0.059275755 APQTSS(ph)SPPPVR ddPTM_A459_MK2206_30min_R2 1 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.003)S(0.009)S(0.843)S(0.144)PPPVR 129.76 0.0022633 5644500 7726.9 10644 11531 10686 11057 9968.7 12476 9488.3 9213 11902 TRUE FALSE 8318.477405 10115.43444 11915.43778 9812.919617 10622.84662 10348.06586 10837.88621 10728.45339 10014.33009 11513.63871 0.722489007 0.878561043 1.034897662 0.852286567 0.922631575 0.8987659 0.94130852 0.931803894 0.869779775 1 13.49105623 -4.808194694 3.877243664 0.926681197 0.708524795 0.589887739 0.052149454 0.151027261 4.030773753 0.012434502 0.088133195 1.56E-05 4.808194694 -0.218156401 APQTSSS(ph)PPPVR ddPTM_A459_MK2206_30min_R1 8 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.012)S(0.039)S(0.039)S(0.91)PPPVR;APQT(0.069)S(0.252)S(0.252)S(0.427)PPPVR;APQTSSS(1)PPPVR;APQT(0.001)S(0.003)S(0.028)S(0.968)PPPVR;APQT(0.023)S(0.023)S(0.077)S(0.878)PPPVR;APQTSS(0.003)S(0.997)PPPVR;APQT(0.002)S(0.008)S(0.008)S(0.981)PPPVR;APQT(0.026)S(0.085)S(0.204)S(0.685)PPPVR 193.11 0.00015352 1679989000 32275.2 32323.5 31804.8 27179.9 34714.2 28669.2 32805.5 30110.1 26498.9 26882.5 TRUE FALSE 29530.02476 30219.23427 29645.97879 29273.30061 33331.45991 30292.42533 30617.10495 29846.85057 29253.55548 30212.90705 0.977397663 1.000209421 0.981235561 0.968900495 1.103219225 1.002631931 1.013378319 0.987884103 0.968246963 1 14.88287738 APQTSSS(ph)PPPVR ddPTM_A459_MK2206_30min_R2 4 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.005)S(0.005)S(0.022)S(0.967)PPPVR;APQTS(0.001)S(0.008)S(0.992)PPPVR;APQT(0.025)S(0.091)S(0.091)S(0.793)PPPVR;APQT(0.023)S(0.033)S(0.109)S(0.835)PPPVR 198.48 0.00012564 1680178300 517284.8 602815 500314.3 616748 585334 633796.9 571667 460039.2 488201.2 588826.3 TRUE FALSE 556888.522 572880.0837 516994.5291 566357.7155 562350.8461 657916.4852 496606.4362 520167.903 530664.0579 569612.9461 0.97766128 1.005735715 0.907624261 0.994285189 0.987250817 1.155023757 0.871831372 0.913195366 0.931622186 1 19.11962241 APQTSSS(ph)PPPVRR ddPTM_A459_MK2206_30min_R1 1 APQTSSSPPPVRR 13 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.012)S(0.148)S(0.148)S(0.692)PPPVRR 101.38 0.018248 33922000 1391.5 1284.4 1476.3 1124.4 1169.6 1266.5 1411.7 1515.4 1160.3 806.19 TRUE FALSE 1273.145618 1200.785327 1376.092869 1211.001483 1123.012355 1338.208136 1317.528069 1502.151018 1280.917337 906.0669036 1.405134227 1.325272253 1.518754149 1.336547531 1.23943646 1.476941857 1.454117862 1.657880904 1.41371165 1 9.823473772 APQTSSS(ph)PPPVRR ddPTM_A459_MK2206_30min_R2 3 APQTSSSPPPVRR 13 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.003)S(0.025)S(0.092)S(0.881)PPPVRR;APQT(0.007)S(0.004)S(0.004)S(0.986)PPPVRR;APQT(0.002)S(0.005)S(0.005)S(0.989)PPPVRR 93.442 0.026527 96765000 24579.3 40926 33416.2 35502 36360 35183 35007.2 26727.6 34988 28293.3 TRUE FALSE 26461.11011 38893.67435 34530.27943 32601.37303 34932.32371 36521.91372 30410.71259 30220.98909 38031.193 27370.09194 0.96678923 1.421028268 1.261606264 1.191131294 1.276295446 1.334373074 1.111092818 1.104161037 1.38951645 1 14.74031266 -10.92875766 3.2943521 0.997447823 1.231402054 0.209621824 0.132964385 58969446.44 68996594.62 1382200.475 0.031198217 1.18E-11 10.92875766 0.233954231 APRPFGSVSS(ph)PK ddPTM_A459_MK2206_30min_R1 1 APRPFGSVSSPK 12 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 APRPFGSVS(0.105)S(0.895)PK 123.26 0.015863 32154000 6168.8 6334.9 6146.1 5287.8 4036.7 3088.9 3701.2 4303.7 4271.1 4149 TRUE FALSE 5644.111166 5922.496859 5728.919856 5695.067272 3875.909691 3263.790849 3454.299701 4266.073205 4715.096129 4663.009443 1.210400973 1.270101837 1.228588517 1.221328702 0.831203483 0.699932284 0.740787627 0.914875523 1.011170187 1 12.18704564 -6.254613653 10.06736239 0.847412948 1.235166723 0.780198367 0.094920341 0.099161602 129.8947239 0.030741966 0.037927762 5.56E-07 6.254613653 0.387753775 APRPS(ph)APSPPPR ddPTM_A459_MK2206_30min_R1 3 APRPSAPSPPPR 12 1 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 APRPS(0.656)APS(0.344)PPPR;APRPS(0.636)APS(0.364)PPPR;APRPS(0.974)APS(0.026)PPPR 101.72 0.014672 113190000 3651.47 3514.81 3755.51 3266.54 3465.93 3413.62 3841.31 3305.96 2655 3362.27 TRUE FALSE 3340.893302 3285.99523 3500.596445 3518.129477 3327.874669 3606.896214 3585.063219 3277.05634 2930.996751 3778.813391 0.884111745 0.869583885 0.926374521 0.931014346 0.880666581 0.954504984 0.948727245 0.867218357 0.775639453 1 11.88371756 -10.87565674 3.502578462 1.000557221 0.896812155 0.290739982 0.049788892 75946912.55 85000494.13 411902.7361 0.013007217 1.33E-11 10.87565674 -0.103745066 APRPSAPS(ph)PPPR ddPTM_A459_MK2206_30min_R1 3 APRPSAPSPPPR 12 1 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 APRPS(0.14)APS(0.86)PPPR;APRPS(0.017)APS(0.983)PPPR;APRPS(0.001)APS(0.999)PPPR 106.54 0.013581 43832800 3328.11 3294.97 2838.51 2428.96 3190.17 2790.71 3605.01 3754.9 3454.68 3762.99 TRUE FALSE 3045.036768 3080.466854 2645.83985 2616.03892 3063.098774 2948.717589 3364.526361 3722.071305 3813.806349 4229.17761 0.720006831 0.728384366 0.625615685 0.618569178 0.724277639 0.697231911 0.795550972 0.880093401 0.901784389 1 12.04616143 -7.789619786 0.946005687 0.983688672 0.673916365 0.895685251 0.038000158 0.176257407 0.287570891 0.036657636 0.015044426 1.62E-08 7.789619786 -0.309772308 APRPSAPS(ph)PPPR ddPTM_A459_MK2206_30min_R2 1 APRPSAPSPPPR 12 1 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 APRPS(0.245)APS(0.755)PPPR 67.415 0.039794 98591000 9115.4 13590 9825.6 9465.6 11071 11214 12098 6687.9 11522 9600.1 TRUE FALSE 9813.282033 12915.14036 10153.1806 8692.230201 10636.29691 11640.75663 10509.51807 7562.031493 12524.16273 9286.849523 1.056685802 1.390691249 1.093285788 0.935971901 1.145307339 1.2534667 1.131655901 0.814273072 1.348591113 1 13.18097354 -1.522878745 0.085605303 0.950533501 1.582076103 0.034518969 0.167468597 585.6452349 3.641273361 3.742984335 43.5276107 0.03 1.522878745 0.631542601 APS(ph)APPGTGALPPAAPSGR ddPTM_A459_MK2206_30min_R1 1 APSAPPGTGALPPAAPSGR 19 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 APS(0.999)APPGT(0.001)GALPPAAPSGR 123.63 0.00041144 2830700 271.46 451.79 434.47 458.06 324.28 268.53 233.1 423.01 384.31 420.89 TRUE FALSE 248.3709015 422.3783889 404.9793869 493.3398606 311.3632409 283.7339365 217.5503243 419.3116682 424.2603998 473.0330308 0.525060377 0.892915212 0.856133421 1.042928989 0.658227271 0.599818444 0.459905144 0.886432111 0.896893815 1 8.885797117 -7.977834907 24.98691044 0.929519214 0.732190239 0.244728702 0.1684695 376.4163445 424337.3915 0.100291199 0.048172943 1.05E-08 7.977834907 -0.197328976 APS(ph)ASPLALHASR ddPTM_A459_MK2206_30min_R1 1 APSASPLALHASR 13 0 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 APS(0.508)AS(0.492)PLALHASR 125.47 0.0021254 5405200 1128.7 644.75 1179.5 791.51 1542 1387.8 1216.6 751.98 674.24 611.69 TRUE FALSE 1032.698138 602.7766578 1099.438826 852.4722373 1480.578875 1466.376037 1135.442834 745.4055181 744.3296608 687.4707752 1.502170238 0.87680332 1.59925173 1.240012329 2.153660822 2.13300127 1.651623421 1.084272299 1.082707349 1 9.425154575 -5.293523923 24.70243481 1.539148524 1.189486523 0.069844615 0.416834015 1252.024193 963952.6021 0.117278311 0.244168116 5.09E-06 5.293523923 -0.349662001 APS(ph)CLEAFR ddPTM_A459_MK2206_30min_R1 2 APSCLEAFR 9 0 A0A3B3IU94;A0A3B3IS81;O43299-3;O43299-2;O43299 A0A3B3IU94 AP5Z1 AP-5 complex subunit zeta-1 1 APS(1)CLEAFR;APS(1)CLEAFR 89.55 0.029721 22557000 4149.1 3880.9 3992.1 3466.7 4211.8 4292.4 4297.7 3833.5 3742.9 2966.6 TRUE FALSE 3796.197257 3628.252705 3721.127375 3733.705835 4044.035087 4535.431979 4011.008275 3799.984114 4131.987849 3334.124805 1.138588829 1.088217424 1.11607321 1.119845853 1.212922528 1.3603066 1.203016836 1.139724616 1.239302093 1 11.70309239 -6.246478827 7.309953949 1.208504221 1.113495596 0.146644495 0.085763996 0.266371404 82.51009878 0.025410804 0.031716764 5.67E-07 6.246478827 -0.095008626 APS(ph)DSSLGTPSDGRPELR ddPTM_A459_MK2206_30min_R1 4 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R2H7;M0R0F9;W4VSQ9;Q15642-5;Q15642-4;Q15642-2;Q15642-3 Q15642 TRIP10 Cdc42-interacting protein 4 1 APS(0.924)DS(0.058)S(0.018)LGTPSDGRPELR;APS(0.865)DS(0.134)S(0.001)LGTPSDGRPELR;APS(0.63)DS(0.313)S(0.057)LGTPSDGRPELR;APS(0.909)DS(0.042)S(0.042)LGT(0.005)PS(0.001)DGRPELR 294.94 1.34E-80 206679000 7879.6 9555.5 8575.4 8321.8 9909.6 9049.2 9294.2 9718.5 7318.5 6484.3 TRUE FALSE 7209.398643 8933.435213 7993.32574 8962.746478 9514.879648 9561.557884 8674.200876 9633.532179 8079.284265 7287.624038 0.989265995 1.225836455 1.096835635 1.229858515 1.30562164 1.312026778 1.190264595 1.321903014 1.108630772 1 12.83123282 -4.759508126 24.93820569 1.213420086 0.989265702 0.271750349 0.10053576 60.18663928 776973.0819 0.024062802 0.152165965 1.74E-05 4.759508126 -0.224154384 APS(ph)DSSLGTPSDGRPELR ddPTM_A459_MK2206_30min_R2 4 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R2H7;M0R0F9;W4VSQ9;Q15642-5;Q15642-4;Q15642-2;Q15642-3 Q15642 TRIP10 Cdc42-interacting protein 4 1 APS(0.971)DS(0.022)S(0.006)LGT(0.001)PSDGRPELR;APS(0.972)DS(0.011)S(0.017)LGTPSDGRPELR;APS(0.98)DS(0.019)S(0.001)LGTPSDGRPELR;APS(0.982)DS(0.009)S(0.009)LGTPSDGRPELR 255.23 5.44E-33 110328000 86133.9 110933.9 98193 114429 105525 117367 129244 99615 116681 99810 TRUE FALSE 92728.37761 105425.0838 101466.7056 105079.7847 101381.5583 121833.4834 112274.1076 112635.0225 126829.7025 96553.20787 0.960386295 1.091885875 1.050889016 1.088309617 1.050007146 1.261827402 1.162821102 1.166559092 1.313573161 1 16.55903657 -6.742254448 24.84476526 1.190232647 1.053084301 0.385744922 0.083182081 222.434337 288055.0612 0.025797887 0.025757651 1.81E-07 6.742254448 -0.137148346 APS(ph)EEEALEK ddPTM_A459_MK2206_30min_R1 1 APSEEEALEK 10 0 Q14147 Q14147 DHX34 Probable ATP-dependent RNA helicase DHX34 1 APS(1)EEEALEK 116.74 0.0062422 2789500 1176 1391.8 1132.5 880.05 1096.8 1004.3 1259.5 1264 1649.7 1802.2 TRUE FALSE 1075.975025 1301.193567 1055.629055 947.8316035 1053.112133 1061.162598 1175.481053 1252.948981 1821.192219 2025.470142 0.531222358 0.642415576 0.521177298 0.467956344 0.519934662 0.523909277 0.580349732 0.618596619 0.899145428 1 10.9840411 -8.279319073 1.99316377 1.004078322 0.538536576 0.936244059 0.042500496 0.076938921 0.568978214 0.043295909 0.012606836 5.26E-09 8.279319073 -0.465541747 APS(ph)EIDPR ddPTM_A459_MK2206_30min_R1 2 APSEIDPR 8 0 O95801 O95801 TTC4 Tetratricopeptide repeat protein 4 1 APS(1)EIDPR;APS(1)EIDPR 96.034 0.021405 27593000 10813.6 11556.7 10863.3 9855.4 12307.5 10372.2 11600.1 10388 8839.1 8941.9 TRUE FALSE 9893.846536 10804.35673 10125.92946 10614.46462 11817.26621 10959.465 10826.27849 10297.17881 9757.956076 10049.69008 0.984492701 1.075093525 1.007586242 1.056198204 1.175883646 1.090527659 1.077274862 1.024626504 0.970970846 1 13.29486339 -7.970958154 3.553245091 0.986972045 1.069314281 0.311472637 0.048555189 0.297179899 7.798536245 0.035019583 0.013955002 1.07E-08 7.970958154 0.082342236 APS(ph)EIDPR ddPTM_A459_MK2206_30min_R2 1 APSEIDPR 8 0 O95801 O95801 TTC4 Tetratricopeptide repeat protein 4 1 APS(1)EIDPR 96.034 0.021405 28659000 222440 307910 300700 337540 318410 345380 314300 236200 290600 280040 TRUE FALSE 239470.1774 292619.6371 310725.1879 309961.9023 305907.6235 358523.6779 273032.0325 267072.151 315875.8627 270902.3177 0.88397242 1.080166606 1.147000847 1.144183279 1.129217447 1.323442638 1.00786156 0.985861447 1.16601388 1 18.04741321 -4.769281149 3.536062679 1.117851638 0.852824899 0.340997687 0.094714635 0.349636467 7.171815634 0.024605139 0.253654298 1.70E-05 4.769281149 -0.265026739 APS(ph)IDGKEELDLAEK ddPTM_A459_MK2206_30min_R1 1 APSIDGKEELDLAEK 15 1 H7C128;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2;H0YA84;H0YAH7;B5MCW3;Q9H0E9 H7C128 BRD8 Bromodomain-containing protein 8 1 APS(1)IDGKEELDLAEK 119.65 0.0089403 4389700 1873.4 2276.2 2414.2 2228.4 1362.9 1578.6 1711.9 1631.4 2181.9 2142.8 TRUE FALSE 1714.057492 2128.018966 2250.33083 2400.031754 1308.612807 1667.978968 1597.702275 1617.136842 2408.716313 2408.266241 0.711739202 0.883631108 0.934419456 0.996580741 0.543383777 0.692605717 0.663424271 0.671494212 1.000186886 1 11.23377918 -4.699688873 21.2706709 0.801846388 0.711725272 0.028479963 0.159899486 23777.26931 8184636.468 0.041594115 70.27026516 2.00E-05 4.699688873 -0.090121116 APS(ph)IDGKEELDLAEK ddPTM_A459_MK2206_30min_R2 2 APSIDGKEELDLAEK 15 1 H7C128;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2;H0YA84;H0YAH7;B5MCW3;Q9H0E9 H7C128 BRD8 Bromodomain-containing protein 8 1 APS(1)IDGKEELDLAEK;APS(1)IDGKEELDLAEK 117.4 0.011958 9464900 41018 47081 47275 43790 45603 32704 52110 42590 33057 52106 TRUE FALSE 44158.36962 44743.026 48851.1249 40212.21692 43812.39708 33948.57364 45267.8944 48156.65923 35932.23811 50405.78549 0.876057563 0.887656557 0.9691571 0.79776987 0.869193817 0.673505498 0.898069417 0.955379601 0.712859402 1 15.62130171 -5.771645692 24.99399524 0.838186719 0.908627031 0.089291303 0.096999942 478.7333402 1172359.683 0.026675464 0.040071907 1.69E-06 5.771645692 0.070440312 APS(ph)LDIKGPEVDVSGPK ddPTM_A459_MK2206_30min_R2 1 APSLDIKGPEVDVSGPK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 APS(1)LDIKGPEVDVSGPK 77.66 0.010804 10436000 31312 33318 38368 28733 35359 29608 51431 33092 31960 33962 TRUE FALSE 33709.27079 31663.47657 39647.16997 26385.42199 33970.628 30734.75319 44678.04792 37417.23802 34739.82303 32853.82272 1.026038007 0.963768413 1.206774941 0.803115735 1.033993161 0.935500062 1.359904091 1.138900588 1.05740581 1 15.00377363 -7.19319424 24.9999862 1.150635275 0.996146466 0.231316944 0.128059188 242.8174639 88949.99132 0.047643723 0.036904665 6.41E-08 7.19319424 -0.154488809 APS(ph)LTDLVK ddPTM_A459_MK2206_30min_R2 1 APSLTDLVK 9 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 APS(1)LTDLVK 97.452 0.020579 2735700 14110 15397 16505 19541 18788 16017 18640 17421 17823 18919 TRUE FALSE 15190.27245 14632.40737 17055.26846 17944.43779 18050.28872 16626.53816 16192.54561 19697.98452 19373.21232 18301.67458 0.829993582 0.799511941 0.931896608 0.98048065 0.986264325 0.908470866 0.884757596 1.076294108 1.058548617 1 14.15968804 -2.627619971 0.298760889 1.023749617 6.69E-12 0.568820243 0.057110055 22.60227481 0.582478432 0.066123153 10.85661634 0.002357111 2.627619971 -1.023749617 APS(ph)LTNDEVEEFR ddPTM_A459_MK2206_30min_R2 1 APSLTNDEVEEFR 13 0 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 APS(0.626)LT(0.374)NDEVEEFR 75.998 0.046013 12916000 4857 5712.7 4322.5 5354.6 6678.2 5112.5 5244.2 3745.6 5089.7 5873 TRUE FALSE 5228.855654 5429.015625 4466.609993 4917.112051 6415.980313 5307.05977 4555.630241 4235.162781 5532.392906 5681.364491 0.920352085 0.955583053 0.786186135 0.865480829 1.129302709 0.934117108 0.80185495 0.745448173 0.973778907 1 12.47202175 -8.503367645 24.77805304 1.000000108 0.893960217 0.122922195 0.102204748 1334.283518 1694469.842 0.106089613 0.02739222 3.14E-09 8.503367645 -0.106039891 APS(ph)PAPPPLPSSR ddPTM_A459_MK2206_30min_R1 1 APSPAPPPLPSSR 13 0 Q6UXY1;Q6UXY1-2;B0QYF0 Q6UXY1 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 APS(0.996)PAPPPLPS(0.002)S(0.001)R 81.185 0.035566 10842000 860.49 823.47 776.8 704.91 902.17 1029.2 740.93 602 810.38 710.42 TRUE FALSE 787.3008069 769.8619533 724.0729803 759.2022903 866.2346585 1087.472415 691.5039116 596.7367775 894.621901 798.432193 0.986058445 0.964217075 0.906868469 0.950866332 1.084919504 1.362009729 0.866077192 0.747385667 1.120473233 1 9.641026081 -6.184542496 12.17346368 1.025896311 0.949588824 0.058780956 0.15249661 4.158088262 651.2186208 0.049079538 0.063375951 6.54E-07 6.184542496 -0.076307487 APS(ph)PAPPPLPSSR ddPTM_A459_MK2206_30min_R2 1 APSPAPPPLPSSR 13 0 Q6UXY1;Q6UXY1-2;B0QYF0 Q6UXY1 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 APS(1)PAPPPLPSSR 122.78 0.0025804 7593100 19925 18728 16052 23700 20206 21882 18104 18882 18065 20191 TRUE FALSE 21450.47332 17797.99475 16587.16567 21763.63419 19412.61091 22714.73484 15726.92305 21349.94223 19636.26105 19532.16932 1.098212542 0.911214441 0.84922291 1.114245624 0.993878897 1.162939685 0.805180561 1.093065592 1.005329245 1 14.25356457 -5.765779858 24.99972487 1.024124299 0.948716423 0.085809239 0.107510616 268.4668532 1546292.753 0.029317091 0.045257245 1.71E-06 5.765779858 -0.075407877 APS(ph)PAPSSVPLGSEKPSNVSQDR ddPTM_A459_MK2206_30min_R1 1 APSPAPSSVPLGSEKPSNVSQDR 23 1 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 APS(0.614)PAPS(0.193)S(0.193)VPLGSEKPSNVSQDR 81.357 0.00027589 132920000 3077.4 3742.1 3594.1 3322.7 2683.7 2797.6 2830.8 3042.3 2946.9 3124.6 TRUE FALSE 2815.65097 3498.48861 3350.142506 3578.61493 2576.802546 2955.997694 2641.962497 3015.701492 3253.240801 3511.699038 0.801791651 0.996238166 0.953994767 1.019055133 0.73377659 0.841757127 0.752331697 0.858758527 0.926400801 1 11.77795349 -4.464785923 15.16999407 0.888373023 0.14318507 0.075053783 0.096116061 4471705.078 32116706.83 0.025367639 100045204.4 3.43E-05 4.464785923 -0.745187952 APS(ph)PAPSSVPLGSEKPSNVSQDR ddPTM_A459_MK2206_30min_R2 2 APSPAPSSVPLGSEKPSNVSQDR 23 1 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 APS(0.614)PAPS(0.193)S(0.193)VPLGS(0.001)EKPSNVSQDR;APS(0.931)PAPS(0.034)S(0.034)VPLGS(0.001)EKPSNVSQDR 103.92 0.00049754 62783000 31121.9 38887 34460.8 37976 34764 33005 44196 32580.8 33877 47233 TRUE FALSE 33504.61659 36955.92813 35609.70587 34873.23932 33398.99068 34261.0284 38393.01211 36839.22243 36823.56022 45691.79108 0.73327431 0.808808919 0.779345809 0.763227672 0.730962606 0.749828965 0.840260607 0.806254724 0.805911945 1 15.47964738 -9.789584639 0.435347653 1.041199509 0.76280808 0.843448433 0.029411331 2.451327625 0.501194831 0.192348349 0.018773027 1.62E-10 9.789584639 -0.278391429 APS(ph)PEPAAPR ddPTM_A459_MK2206_30min_R1 3 APSPEPAAPR 10 0 P20749 P20749 BCL3 B-cell lymphoma 3 protein 1 APS(1)PEPAAPR;APS(1)PEPAAPR;APS(1)PEPAAPR 149.94 0.00072897 215350000 8557.2 8341.2 8162.2 7731.8 9123.5 6923.9 8492.3 7707.9 7354 7145.2 TRUE FALSE 7829.365204 7798.186364 7608.172605 8327.304576 8760.091676 7315.925234 7925.794162 7640.510643 8118.474617 8030.40132 0.97496562 0.97108302 0.947421219 1.036972406 1.090865989 0.911028595 0.986973608 0.95144817 1.010967484 1 12.97125637 -5.727571861 24.99995114 0.996045288 0.96514927 0.102806058 0.045441396 527.6216198 389470.1145 0.013031965 0.022570128 1.87E-06 5.727571861 -0.030896018 APS(ph)PEPAAPR ddPTM_A459_MK2206_30min_R2 3 APSPEPAAPR 10 0 P20749 P20749 BCL3 B-cell lymphoma 3 protein 1 APS(1)PEPAAPR;APS(1)PEPAAPR;APS(1)PEPAAPR 109.16 0.010241 58231000 128735 161926 163608 185026 144989 172121 172326.6 125175 145787 137852.5 TRUE FALSE 138591.0506 153884.9903 169062.6091 169908.7839 139296.0033 178671.1853 149699.9104 141535.8023 158467.2897 133354.3842 1.039268798 1.153955239 1.26776941 1.27411472 1.044555109 1.339822356 1.122572095 1.061350949 1.18831706 1 17.02490573 -8.975049134 0.628501594 0.998650526 1.182877031 0.202219838 0.098361812 2.538994407 1.796004012 0.11987184 0.040525199 1.06E-09 8.975049134 0.184226505 APS(ph)PIDHPR ddPTM_A459_MK2206_30min_R2 1 APSPIDHPR 9 0 Q8NAS9-2;Q8NAS9 Q8NAS9-2 C5orf17 Uncharacterized protein C5orf17 1 APS(1)PIDHPR 84.817 0.035994 5501300 17181 21333 24447 27816 30041 23379 25297 26781 26042 21390 TRUE FALSE 18496.39057 20273.63424 25262.05078 25543.34382 28861.4394 24268.70423 21975.47351 30281.36865 28307.08609 20692.04605 0.893888914 0.979779099 1.22085804 1.234452299 1.394808388 1.172851837 1.06202516 1.463430372 1.368017741 1 14.33678869 -5.204910899 2.487381409 1.257391136 0.896831093 0.444838632 0.136326882 0.275816297 3.193822401 0.037450267 0.139183182 6.24E-06 5.204910899 -0.360560043 APS(ph)PPEAALQPAPTEPR ddPTM_A459_MK2206_30min_R2 2 APSPPEAALQPAPTEPR 17 0 Q9NVR5-2;Q9NVR5 Q9NVR5-2 DNAAF2 Protein kintoun 1 APS(1)PPEAALQPAPTEPR;APS(1)PPEAALQPAPTEPR 135.95 0.00051523 6816100 12256.2 36759 18349.1 46997 26986 48780 22710.5 23159 27977 17033.4 TRUE FALSE 13194.5441 34933.60151 18960.84984 43157.19476 25926.39405 50636.35708 19728.58407 26185.96082 30410.38889 16477.60155 0.800756351 2.120065921 1.150704474 2.619143 1.573432515 3.073041724 1.197297071 1.589185218 1.845559185 1 14.00821864 -4.751539034 24.86744333 1.834627851 0.80075411 0.18283495 0.626876237 624.9486632 1569614.908 0.147649307 1.922968903 1.77E-05 4.751539034 -1.033873741 APS(ph)PPLSQVFQTR ddPTM_A459_MK2206_30min_R1 1 APSPPLSQVFQTR 13 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 APS(0.991)PPLS(0.003)QVFQT(0.007)R 79.744 0.038469 133040000 500.47 558.7 667.32 620.32 573.93 538.3 684.01 511.47 620.57 376.04 TRUE FALSE 457.9023984 522.3285285 622.0241777 668.0971539 551.0691528 568.7780808 638.3809409 506.9982717 685.0804722 422.6266742 1.083467813 1.23590999 1.471805297 1.580821076 1.303914747 1.345816806 1.510507926 1.199636234 1.621006231 1 8.723240016 -4.994324284 3.577111514 1.393679402 1.095181372 0.216751314 0.17621867 0.308860326 8.289644485 0.042148667 0.187160187 1.01E-05 4.994324284 -0.298498029 APS(ph)PPLSQVFQTR ddPTM_A459_MK2206_30min_R2 4 APSPPLSQVFQTR 13 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 APS(1)PPLSQVFQTR;APS(0.996)PPLS(0.004)QVFQTR;APS(0.998)PPLS(0.002)QVFQTR;APS(1)PPLSQVFQTR 150.12 0.00050097 256273000 253880 281576 278446 311558 273635 329373 292969 274457 259325 282127 TRUE FALSE 273317.248 267593.3453 287729.2507 286102.7148 262890.715 341907.5203 254501.8184 310329.4723 281880.6197 272921.2191 1.001451074 0.980478345 1.054257531 1.048297804 0.963247621 1.252770017 0.932510192 1.137066122 1.032827791 1 18.05812504 -5.269877948 20.92965216 1.05702942 0.99096471 0.074943303 0.085534932 147.7668331 366511.318 0.020998338 0.045241393 5.37E-06 5.269877948 -0.06606471 APS(ph)PPPTASNSSNSQSEK ddPTM_A459_MK2206_30min_R2 1 APSPPPTASNSSNSQSEK 18 0 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12;Q8N108-19;Q8N108-16;Q8N108-14;Q8N108-18;Q8N108-15 Q8N108-17 MIER1 Mesoderm induction early response protein 1 1 APS(0.998)PPPT(0.002)ASNSSNSQSEK 140.96 0.00031375 3998100 8940 23671 7226.3 13329 9439.4 6381.4 14580 11524 7205.4 16537 TRUE FALSE 9624.453274 22495.53256 7467.221235 12239.97806 9068.761727 6624.248649 12665.62849 13030.22637 7832.112668 15997.39904 0.60162613 1.406199376 0.466777206 0.765123007 0.566889761 0.414082854 0.791730484 0.814521556 0.489586629 1 13.96554974 -5.286470521 24.92919819 0.65280294 1.003913038 0.226992736 0.25057895 849.9747629 846511.8005 0.061158819 0.127395635 5.17E-06 5.286470521 0.351110098 APS(ph)PPVEHPR ddPTM_A459_MK2206_30min_R1 4 APSPPVEHPR 10 0 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR 112.84 0.0052852 180043400 8065.838 12516.26 10150.78 10669.53 7411.09 6770.43 8067.34 8492.42 9255.16 8502.82 TRUE FALSE 7379.796123 11701.4492 9461.773335 11491.29905 7115.890592 7153.765896 7529.182468 8418.171667 10217.267 9556.213535 0.77225107 1.224485949 0.990117404 1.202495006 0.74463495 0.748598372 0.787883448 0.880910796 1.069175251 1 13.22222338 -6.267695784 24.98752197 0.855550056 1.055903689 0.238295682 0.15171023 653.1945646 2608796.929 0.046039591 0.053461872 5.40E-07 6.267695784 0.200353634 APS(ph)PPVEHPR ddPTM_A459_MK2206_30min_R2 4 APSPPVEHPR 10 0 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR 120.57 0.0033379 228533300 19807.3 25745.7 20660.2 29786.7 36671.7 29354.2 23445.8 17860.7 25537.3 28310 TRUE FALSE 21323.76212 24467.20598 21349.00076 27353.03133 35231.7848 30471.29465 20367.3383 20195.15481 27758.48819 27386.24702 0.778630314 0.893412155 0.779551895 0.99878714 1.286477288 1.112649522 0.743706806 0.737419581 1.013592267 1 14.74116395 -5.767753411 24.89699529 0.981589642 0.824819519 0.198458452 0.153911294 280.9723464 1107913.264 0.049502272 0.075504486 1.71E-06 5.767753411 -0.156770122 APS(ph)PSGLMSPSR ddPTM_A459_MK2206_30min_R1 2 APSPSGLMSPSR 12 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 APS(0.976)PS(0.024)GLMSPSR;APS(0.686)PS(0.314)GLMSPSR 111.31 0.0068506 12837300 1713.48 1845.53 1725.4 1509.82 1478.92 1542.42 1772.27 1440.5 1527.12 1401.6 TRUE FALSE 1567.739528 1725.385662 1608.284655 1626.106598 1420.011485 1629.750487 1654.045102 1427.90586 1685.869589 1575.24079 0.995238022 1.095315505 1.020977025 1.032290815 0.901456777 1.034604042 1.050026836 0.906468313 1.070229771 1 10.62135666 -6.028380887 24.97370002 0.991509273 1.040264622 0.115564686 0.056852349 1362.025019 1198508.393 0.016196389 0.020957353 9.37E-07 6.028380887 0.048755348 APS(ph)PSGLMSPSR ddPTM_A459_MK2206_30min_R2 4 APSPSGLMSPSR 12 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 APS(0.948)PS(0.052)GLMSPSR;APS(0.981)PS(0.019)GLMSPSR;APS(0.703)PS(0.297)GLMSPSR;APS(0.913)PS(0.087)GLMSPSR 148.89 0.00059074 33699900 36140.8 51884 43426 44837.3 41109 47343.2 55235.2 34721.3 48295.5 46211.3 TRUE FALSE 38907.76744 49307.51601 44873.80117 41173.94916 39494.8541 49144.87865 47982.75189 39259.49313 52496.15529 44703.42907 0.870353086 1.102991807 1.003811164 0.921046775 0.883486008 1.099353667 1.073357299 0.878221066 1.174320547 1 15.44809788 -6.771850998 24.97752603 1.039208489 0.965162006 0.177474864 0.094122154 456.7542872 1095748.933 0.032901501 0.029323422 1.69E-07 6.771850998 -0.074046482 APS(ph)PSSR ddPTM_A459_MK2206_30min_R2 1 APSPSSR 7 0 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 APS(0.999)PS(0.001)SR 88.177 0.039857 0 1176.3 932.68 2321.4 2741.3 2856.1 1842.1 2178.2 5826.1 4796.9 1985.9 TRUE FALSE 1266.358432 886.3644674 2398.794317 2517.327021 2743.955163 1912.202406 1892.199724 6587.591274 5214.125691 1921.100246 0.659183942 0.461383767 1.248656504 1.31035693 1.42832482 0.995368363 0.984956265 3.429072111 2.714135144 1 10.90771709 -7.740164728 24.99939234 2.553702599 1.027260439 0.492767666 0.628849698 164.7535682 193598.7904 0.289578773 0.166983251 1.82E-08 7.740164728 -1.526442159 APS(ph)PTAEQPPGGGDSAR ddPTM_A459_MK2206_30min_R1 4 APSPTAEQPPGGGDSAR 17 0 Q15742;Q15742-2;Q15742-3 Q15742 NAB2 NGFI-A-binding protein 2 1 APS(0.981)PT(0.019)AEQPPGGGDSAR;APS(0.99)PT(0.01)AEQPPGGGDSAR;APS(0.957)PT(0.043)AEQPPGGGDSAR;APS(0.978)PT(0.022)AEQPPGGGDSAR 185.71 5.78E-08 54712700 2497.59 1904.68 2465.77 1737.73 3445.77 3150.19 3215.91 2572.82 1780.79 2134.89 TRUE FALSE 2285.156855 1780.684986 2298.400402 1871.570266 3308.517684 3328.551035 3001.382512 2550.326106 1965.909493 2399.376291 0.952396197 0.742144945 0.957915776 0.780023656 1.378907384 1.387256783 1.250901129 1.062912106 0.819341885 1 11.22844372 -6.245633128 24.72118173 1.169951402 0.856964444 0.40297101 0.172947063 739.0735073 1155920.051 0.054832521 0.07053101 5.68E-07 6.245633128 -0.312986958 APS(ph)PTAEQPPGGGDSAR ddPTM_A459_MK2206_30min_R2 2 APSPTAEQPPGGGDSAR 17 0 Q15742;Q15742-2;Q15742-3 Q15742 NAB2 NGFI-A-binding protein 2 1 APS(0.967)PT(0.033)AEQPPGGGDSAR;APS(0.896)PT(0.104)AEQPPGGGDSAR 132.25 0.00072106 37844000 4476.6 8109.1 7632.9 13512.9 10019.4 10098.7 8046.8 7563.4 10041.9 7084.2 TRUE FALSE 4819.331938 7706.413886 7887.377076 12408.85284 9625.988013 10483.0131 6990.245494 8551.962349 10915.32631 6853.043134 0.703239691 1.124524351 1.150930604 1.810706952 1.404629713 1.529687308 1.020020647 1.24790727 1.5927707 1 12.74252905 -4.848529709 1.706194405 1.370796379 0.542921363 0.401128791 0.241417867 0.821350195 2.670775656 0.068015391 1.079414274 1.42E-05 4.848529709 -0.827875016 APS(ph)PTGPALISGASPVHCAADGTVELK ddPTM_A459_MK2206_30min_R2 1 APSPTGPALISGASPVHCAADGTVELK 27 0 E7EWD6;Q76L83 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 APS(0.954)PT(0.046)GPALISGASPVHCAADGTVELK 94.019 3.51E-06 3811900 8085.7 14006 13567 13114 15186 14778 13982 10212 13093 12092 TRUE FALSE 8704.747409 13310.48241 14019.31701 12042.54425 14589.72134 15340.38715 12146.1466 11546.74346 14231.80547 11697.43903 0.744158391 1.137897139 1.198494557 1.02950263 1.247257737 1.311431255 1.038359471 0.987117217 1.21665994 1 13.51390509 -4.76115824 24.80859733 1.134760111 0.744157931 0.53726353 0.10722819 4.83962746 426243.5058 0.027170211 0.153782938 1.73E-05 4.76115824 -0.39060218 APS(ph)PTSSAGEEGTK ddPTM_A459_MK2206_30min_R1 2 APSPTSSAGEEGTK 14 0 O94964-2;H0YDM2;O94964;O94964-3 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 APS(0.973)PT(0.026)S(0.001)SAGEEGTK;APS(0.979)PT(0.021)SSAGEEGTK 185.32 7.92E-05 18269500 4792 5059.6 4972.9 4145.5 3660.8 3951.6 5440.9 3997.9 5674.6 6534.6 TRUE FALSE 4384.415236 4730.21912 4635.353403 4464.787128 3514.982584 4175.336177 5077.947488 3962.946782 6264.494977 7344.155582 0.596993785 0.644079373 0.631162201 0.607937438 0.478609494 0.568525017 0.691427004 0.539605505 0.852990505 1 12.84238091 -8.44107885 3.450745239 0.997667273 0.596778193 0.852709592 0.056580608 0.078555365 1.790461771 0.056560137 0.014994745 3.62E-09 8.44107885 -0.400889079 APS(ph)PTSSAGEEGTK ddPTM_A459_MK2206_30min_R2 4 APSPTSSAGEEGTK 14 0 O94964-2;H0YDM2;O94964;O94964-3 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 APS(0.92)PT(0.065)S(0.008)S(0.008)AGEEGTK;APS(0.563)PT(0.326)S(0.098)S(0.013)AGEEGTK;APS(0.986)PT(0.012)S(0.002)SAGEEGTK;APS(0.923)PT(0.074)S(0.002)SAGEEGTK 160.87 0.00028748 36688600 211688 163693 168348 191170 157267 141589 211465 175839 129120 190526 TRUE FALSE 227894.996 155564.2437 173960.6383 175550.7995 151091.9074 146977.2686 183699.3915 198821.761 140350.6242 184309.1522 1.236482254 0.844039711 0.943852414 0.952480099 0.819774306 0.797449648 0.996691642 1.078740576 0.761495685 1 17.49176819 -4.754095837 24.98048725 0.911642525 1.236482831 0.503589851 0.097088293 221.8495984 754600.353 0.024236294 0.244448024 1.76E-05 4.754095837 0.324840305 APS(ph)RQDVYGPQPQVR ddPTM_A459_MK2206_30min_R1 2 APSRQDVYGPQPQVR 15 1 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR 98.573 0.004836 85676000 3760.1 4056.7 3425.3 3067.3 3180 3719.9 2971.6 2366 2813 2341.8 TRUE FALSE 3440.28375 3792.608093 3192.800179 3303.543977 3053.333866 3930.517523 2773.369986 2345.314311 3105.421416 2631.919864 1.307138488 1.441004396 1.213106912 1.255184105 1.160116578 1.493403191 1.053744084 0.891103997 1.179907283 1 11.36189985 -7.404554219 7.412309708 1.01629012 1.303093493 0.594150972 0.113544437 0.183993376 10.49849771 0.046859291 0.031422559 3.94E-08 7.404554219 0.286803373 APS(ph)RQDVYGPQPQVR ddPTM_A459_MK2206_30min_R2 3 APSRQDVYGPQPQVR 15 1 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(0.999)RQDVY(0.001)GPQPQVR 139.21 0.0018726 223876500 42744 86865 52305 79866 58196 79001 72252 52054 66161 49704 TRUE FALSE 46016.5135 82551.41041 54048.82259 73340.69232 55910.93263 82007.43841 62765.22561 58857.63653 71915.56419 48082.16255 0.957039182 1.716882229 1.124093005 1.525320169 1.162820673 1.705568844 1.305374432 1.224105435 1.495680734 1 15.55321416 -10.26055247 9.604976928 1 1.365141732 0.166879119 0.239031152 0 0 0.209056405 0.050703626 5.49E-11 10.26055247 0.365141732 APS(ph)SSSLNSATSSQSK ddPTM_A459_MK2206_30min_R2 1 APSSSSLNSATSSQSK 16 0 A0A2R8Y534;A0A2R8Y4Q0;Q5F1R6;Q5F1R6-3;Q5F1R6-2 A0A2R8Y534 DNAJC21 DnaJ homolog subfamily C member 21 1 APS(0.966)S(0.032)S(0.001)SLNSATSSQSK 155.2 9.28E-05 2713200 8046.2 8702.4 7216.5 7647.2 6012.9 6435.1 9191.5 6789.1 6346.1 8507.4 TRUE FALSE 8662.223258 8270.25147 7457.094508 7022.399298 5776.803334 6679.99224 7984.645009 7676.45868 6898.072307 8229.804235 1.052543051 1.004914726 0.906108371 0.853288741 0.701936907 0.811683006 0.970210807 0.932763218 0.838181822 1 13.0066424 -3.326232426 10.49560978 0.899882895 0.997341113 0 0.101669072 0 0 0.025342071 0 0.00047181 3.326232426 0.097458217 APS(ph)TPLLTVR ddPTM_A459_MK2206_30min_R2 1 APSTPLLTVR 10 0 F8WAE5;Q9BY44-4;Q9BY44-3;Q9BY44;F8WF18;F8WAT3;C9IZE1 F8WAE5 EIF2A "Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed" 1 APS(0.847)T(0.153)PLLTVR 111.5 0.008813 4545800 22435 21310 25477 27949 26757 21439 27170 23102 22242 24124 TRUE FALSE 24152.64085 20251.77639 26326.39046 25665.4773 25706.38574 22254.87617 23602.54636 26121.51072 24176.56896 23336.83586 1.034957824 0.867803009 1.128104539 1.09978394 1.101536896 0.953637259 1.011385884 1.119325297 1.03598316 1 14.51032134 -5.265966088 24.99921348 1.05839072 0.951380418 0.288808445 0.065736385 432.9534186 2391040.654 0.017287738 0.038091018 5.42E-06 5.265966088 -0.107010302 APS(ph)VANVGSHCDLSLK ddPTM_A459_MK2206_30min_R1 2 APSVANVGSHCDLSLK 16 0 P21333-2;P21333;Q60FE5 P21333-2 FLNA Filamin-A 1 APS(1)VANVGSHCDLSLK;APS(1)VANVGSHCDLSLK 112.53 0.0016074 182447000 10135.6 10210.6 9813.5 6671.9 7784.7 6832.4 10259.2 7806.3 11604.7 18454.2 TRUE FALSE 9273.513996 9545.888084 9147.386962 7185.770894 7474.618915 7219.244584 9574.827487 7738.050342 12811.05009 20740.44562 0.447122216 0.460254725 0.441041004 0.346461741 0.36038854 0.348075674 0.461650037 0.373089879 0.617684419 1 14.34015927 -8.621018408 2.43332024 0.999685144 0.403948485 0.942508523 0.045071385 0.093702554 1.23363422 0.046772192 0.012693046 2.39E-09 8.621018408 -0.595736659 down APS(ph)VANVGSHCDLSLK ddPTM_A459_MK2206_30min_R2 4 APSVANVGSHCDLSLK 16 0 P21333-2;P21333;Q60FE5 P21333-2 FLNA Filamin-A 1 APS(0.998)VANVGS(0.002)HCDLSLK;APS(0.998)VANVGS(0.002)HCDLSLK;APS(0.999)VANVGS(0.001)HCDLSLK;APS(0.999)VANVGS(0.001)HCDLSLK 86.959 0.0099929 476882000 1185080 827960 849340 784000 669300 658380 885890 640050 527200 817640 TRUE FALSE 1275810.636 786844.7104 877656.5717 719944.6921 643019.919 683435.1122 769571.5789 723706.7326 573054.903 790960.4738 1.612989117 0.994796499 1.109608635 0.910215764 0.812960875 0.864057225 0.972958326 0.914972058 0.724505107 1 19.59324608 -2.02242456 0.979894135 0.889009438 200 0.821949165 0.097370819 184.8577274 0.849241321 0.030598507 81839.39619 0.00949676 2.02242456 199.1109905 APS(ph)VATVGSICDLNLK ddPTM_A459_MK2206_30min_R1 3 APSVATVGSICDLNLK 16 0 O75369-8;O75369-2;O75369-9;O75369;E7EN95;O75369-7;O75369-5;O75369-4;A0A0C4DGA1 O75369-8 FLNB Filamin-B 1 APS(1)VATVGSICDLNLK;APS(0.985)VAT(0.015)VGSICDLNLK;APS(0.999)VAT(0.001)VGSICDLNLK 295.71 2.36E-75 116589200 6737.2 6481.7 6780.2 5205.8 5953.7 4348.7 6457.4 5531.2 6044 6533.2 TRUE FALSE 6164.165762 6059.740152 6319.978915 5606.751618 5716.551522 4594.919636 6026.638628 5482.841302 6672.295429 7342.582139 0.839509269 0.825287349 0.860729754 0.763593993 0.778547848 0.625790703 0.820779191 0.746718416 0.908712399 1 12.84207178 -8.473570901 3.516680549 0.999086025 0.782234137 0.56524106 0.062633658 0.157941513 4.221201684 0.06351264 0.016785804 3.36E-09 8.473570901 -0.216851888 APS(ph)VATVGSICDLNLK ddPTM_A459_MK2206_30min_R2 2 APSVATVGSICDLNLK 16 0 O75369-8;O75369-2;O75369-9;O75369;E7EN95;O75369-7;O75369-5;O75369-4;A0A0C4DGA1 O75369-8 FLNB Filamin-B 1 APS(1)VATVGSICDLNLK;APS(1)VATVGSICDLNLK 205.66 9.92E-08 139243000 146873 169972 168930 165121 147924 142350 130282 113922 112750 127239 TRUE FALSE 158117.7098 161531.4376 174562.0419 151630.0861 142115.7605 147767.229 113175.8169 128811.9966 122556.7912 123087.2019 1.284599109 1.312333331 1.418198149 1.231891568 1.154594128 1.200508475 0.919476722 1.046510073 0.995690773 1 16.90932124 -6.689098945 1.055189584 0.991173596 1.333083784 0.823806053 0.064406438 0.200883951 0.479469647 0.034482981 0.033619092 2.05E-07 6.689098945 0.341910188 APS(ph)YSGLSMVSGVK ddPTM_A459_MK2206_30min_R1 2 APSYSGLSMVSGVK 14 0 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5 A0A2R8Y7K2 SPAST Spastin 1 APS(0.999)YS(0.001)GLSMVSGVK;APS(0.999)YS(0.001)GLSMVSGVK 202.92 4.14E-05 196797000 2527.5 3090.4 2759.8 2418.2 2802.2 2772.8 2314.5 2508.3 2021.4 1879.4 TRUE FALSE 2312.522853 2889.214398 2572.472465 2604.450183 2690.58244 2929.79354 2160.103928 2486.370198 2231.531764 2112.234261 1.094823096 1.367847521 1.217891648 1.233030934 1.27380873 1.387058999 1.022663048 1.17712805 1.056479295 1 11.04455413 -7.274478258 24.99901225 1.078828263 1.264361894 0.547581039 0.087902437 636.0461023 1219465.208 0.035115151 0.023836696 5.32E-08 7.274478258 0.185533631 APS(ph)YSGLSMVSGVK ddPTM_A459_MK2206_30min_R2 2 APSYSGLSMVSGVK 14 0 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5 A0A2R8Y7K2 SPAST Spastin 1 APS(0.998)YS(0.002)GLSMVSGVK;APS(0.855)YS(0.119)GLS(0.026)MVSGVK 181.58 7.50E-05 58800000 108746 139135 139132 130427 122539 116155 115016 65451 115766 114850 TRUE FALSE 117071.6774 132225.7582 143770.5914 119770.6969 117727.5032 120575.3599 99914.26104 74005.67043 125835.1174 111102.4539 1.053727197 1.190124552 1.294036148 1.078020266 1.059630089 1.085262797 0.899298418 0.666102933 1.132604303 1 16.76153116 -6.923990777 1.592688786 0.900344271 1.158293817 0.365259753 0.128604584 0.370780334 1.926135568 0.06054794 0.048252265 1.19E-07 6.923990777 0.257949546 APSAS(ph)PLALHASR ddPTM_A459_MK2206_30min_R1 1 APSASPLALHASR 13 0 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 APS(0.23)AS(0.767)PLALHAS(0.003)R 139.64 0.00092431 5953400 1101.7 688.51 1234.6 637.16 1563.6 1533.7 1071.5 911.61 663.65 556.97 TRUE FALSE 1007.99463 643.6878739 1150.798792 686.2341736 1501.318501 1620.536769 1000.02219 903.6398899 732.6387924 625.9716485 1.610287993 1.028301961 1.83841999 1.096270375 2.398380988 2.588834131 1.59755189 1.443579581 1.170402516 1 9.289953506 -8.084785974 2.095033291 1.051496268 1.745056239 0.246215745 0.460769385 0.53902325 4.237870315 0.440717776 0.13981631 8.23E-09 8.084785974 0.69355997 APSAS(ph)PLALHASR ddPTM_A459_MK2206_30min_R2 3 APSASPLALHASR 13 0 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 APS(0.432)AS(0.568)PLALHASR;APS(0.145)AS(0.855)PLALHASR;APS(0.059)AS(0.941)PLALHASR 87.157 0.018832 18757100 19265.3 35419 22251.3 52585 40290 65943 46397 33644.8 45986 26738.6 TRUE FALSE 20740.26618 33660.14396 22993.14724 48288.63729 38708.01216 68452.50707 40305.01817 38042.29088 49985.77916 25866.12167 0.801831308 1.301321643 0.88892906 1.866868095 1.496475299 2.646415568 1.558216523 1.470738109 1.932480632 1 14.65877613 -5.762661576 24.99745915 1.753559556 1.027756681 0.376675987 0.417047742 32.46552704 664039.6608 0.112958241 0.178625691 1.73E-06 5.762661576 -0.725802875 APSDS(ph)S(ph)LGTPSDGRPELR ddPTM_A459_MK2206_30min_R2 1 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R2H7;M0R0F9;W4VSQ9;Q15642-5;Q15642-4;Q15642-2;Q15642-3 Q15642 TRIP10 Cdc42-interacting protein 4 2 APS(0.16)DS(0.867)S(0.972)LGTPSDGRPELR 104.49 0.0035564 25273000 43335 50620 44163 58522 57448 64951 53873 41600 45195 44077 TRUE FALSE 46652.76092 48106.28441 45635.37238 53740.5654 55192.30287 67422.75582 46799.41039 47037.26283 49125.97941 42638.7711 1.094139435 1.128228679 1.070278791 1.260368533 1.294415891 1.581254668 1.097578781 1.103157094 1.152143416 1 15.37987824 -7.441758753 25 1.096597997 1.238257484 0.215883014 0.139586004 183.6995125 56611.99596 0.064165767 0.043260531 3.62E-08 7.441758753 0.141659487 APSDS(ph)SLGTPSDGRPELR ddPTM_A459_MK2206_30min_R2 3 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R2H7;M0R0F9;W4VSQ9;Q15642-5;Q15642-4;Q15642-2;Q15642-3 Q15642 TRIP10 Cdc42-interacting protein 4 1 APS(0.383)DS(0.51)S(0.099)LGT(0.007)PS(0.001)DGRPELR;APS(0.244)DS(0.374)S(0.374)LGT(0.006)PSDGRPELR;APS(0.168)DS(0.529)S(0.168)LGT(0.121)PS(0.015)DGRPELR 158.14 9.02E-05 78955600 100677 141336 135256 173179 137208 157688 148850 130426 138157 140869 TRUE FALSE 108384.9085 134317.4598 139765.3675 159029.7217 131820.5245 163688.9273 129305.8162 147473.126 150173.6461 136272.4561 0.795354481 0.985653768 1.025631823 1.166998279 0.967330657 1.201188649 0.948877124 1.082193205 1.10201027 1 17.05613446 -4.685473961 1.708942548 1.066945962 0.65325832 0.524790719 0.076879206 0.910326754 2.199696397 0.019737148 0.669345369 2.06E-05 4.685473961 -0.413687643 APSDSS(ph)LGTPSDGRPELR ddPTM_A459_MK2206_30min_R1 1 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R2H7;M0R0F9;W4VSQ9;Q15642-5;Q15642-4;Q15642-2;Q15642-3 Q15642 TRIP10 Cdc42-interacting protein 4 1 APSDS(0.039)S(0.947)LGT(0.014)PSDGRPELR 166.77 6.69E-07 4109200 1064.9 1140.8 956.84 959.48 1343.6 1042.1 876.48 890.58 930.81 691.39 TRUE FALSE 974.324663 1066.533713 891.8923667 1033.379316 1290.081567 1101.102801 818.0116184 882.793753 1027.57103 777.0446129 1.253885101 1.372551453 1.147800721 1.329884152 1.660241311 1.417039361 1.052721562 1.136091465 1.32240931 1 9.601853621 -7.255942291 24.92210794 1.139146538 1.366122001 0.386196853 0.145306641 524.0965277 2376099.971 0.060757948 0.045694606 5.55E-08 7.255942291 0.226975463 APSDTGSLS(ph)PPWDQDRR ddPTM_A459_MK2206_30min_R2 1 APSDTGSLSPPWDQDRR 17 1 G3V599;Q96PC5-6;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-14;Q96PC5-7;Q96PC5-12;Q96PC5;Q96PC5-5;Q96PC5-8 G3V599 MIA2 Melanoma inhibitory activity protein 2 1 APS(0.02)DT(0.068)GS(0.017)LS(0.894)PPWDQDRR 62.792 0.02629 5159000 9716.8 10304 11734 10508 10669 10983 10304 9655.7 6055.2 11938 TRUE FALSE 10460.72568 9792.318343 12125.2057 9649.462787 10250.08145 11400.96576 8951.072423 10917.73314 6581.870351 11548.46404 0.905810993 0.847932531 1.049940985 0.83556244 0.887570972 0.987227888 0.775087699 0.945384001 0.569934697 1 13.49541336 -7.271565228 24.85607821 0.818050267 0.916506563 0.130560939 0.121547922 1355.430188 3327183.171 0.047396856 0.032387651 5.35E-08 7.271565228 0.098456295 APSEEELHGDQTDFGQGS(ph)QSPQKQEEQR ddPTM_A459_MK2206_30min_R2 2 APSEEELHGDQTDFGQGSQSPQKQEEQR 28 1 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-2;A0A087WWG1 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 APSEEELHGDQT(0.054)DFGQGS(0.667)QS(0.279)PQKQEEQR;APSEEELHGDQT(0.11)DFGQGS(0.445)QS(0.445)PQKQEEQR 58.054 0.0025897 38769000 52319 45899 51605 42143 43029 38063 52877 44753 40031 55052 TRUE FALSE 56324.58287 43619.7224 53325.48494 38699.78209 41339.46526 39511.51414 45934.18638 50602.37076 43512.82402 53255.65775 1.057626274 0.819062692 1.00131117 0.726679262 0.776245511 0.741921437 0.862522187 0.950178308 0.817055424 1 15.70064718 -2.445441749 1.434560661 0.84387653 199.9675546 0.266360656 0.096406579 1769.601125 4.949446584 0.026592006 1158240.651 0.00358557 2.445441749 199.1236781 APSGSSLPSS(ph)PGSNSR ddPTM_A459_MK2206_30min_R1 1 APSGSSLPSSPGSNSR 16 0 Q96Q07-3;Q96Q07-2;Q96Q07 Q96Q07-3 BTBD9 BTB/POZ domain-containing protein 9 1 APSGSSLPS(0.003)S(0.726)PGS(0.27)NSR 196.18 1.47E-20 0 1215 1015.8 1128.2 961.16 1284.6 1186.4 1336.6 1041 812.52 936.73 TRUE FALSE 1111.65787 949.6712354 1051.620927 1035.18871 1233.431662 1253.572943 1247.437853 1031.898647 896.9843616 1052.779184 1.055926909 0.902061182 0.99889981 0.983291392 1.171595792 1.190727326 1.184899807 0.98016627 0.85201567 1 10.03998715 -4.367708819 21.57338882 1.037015907 43.14112883 0.000814167 0.111797888 14060.75381 1961521.276 0.029865639 99805.50622 4.29E-05 4.367708819 42.10411292 APSLT(ph)NDEVEEFR ddPTM_A459_MK2206_30min_R1 2 APSLTNDEVEEFR 13 0 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 APS(0.104)LT(0.896)NDEVEEFR;APS(0.107)LT(0.893)NDEVEEFR 171.15 0.00048921 39009000 1087.25 1440.44 1024.16 1135.79 1256.87 1190.18 1220.85 1394.75 1036.41 905.71 TRUE FALSE 994.7736781 1346.667094 954.6428727 1223.268743 1206.806206 1257.566963 1139.409324 1382.555848 1144.148528 1017.916193 0.977264814 1.322964606 0.937840344 1.20173817 1.185565389 1.235432713 1.119354749 1.358221687 1.124010539 1 9.99140307 APSLT(ph)NDEVEEFR ddPTM_A459_MK2206_30min_R2 1 APSLTNDEVEEFR 13 0 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 APS(0.12)LT(0.88)NDEVEEFR 134.02 0.002955 9797300 4771.8 4411.6 5906.8 4847.6 5382.8 4755.6 6265.6 3828.7 4695.9 4821.7 TRUE FALSE 5137.132677 4192.526359 6103.729764 4451.535573 5171.444226 4936.57769 5442.919194 4329.124236 5104.340894 4664.368324 1.101356565 0.898841187 1.308586574 0.954370509 1.108712663 1.058359321 1.166914535 0.928126583 1.094326292 1 12.187466 -7.763852683 24.99887136 1.008419862 1.081549776 0.092380535 0.111335358 169.1194854 1751786.498 0.05409731 0.027909412 1.72E-08 7.763852683 0.073129913 APSPAPS(ph)SVPLGSEKPSNVSQDR ddPTM_A459_MK2206_30min_R1 3 APSPAPSSVPLGSEKPSNVSQDR 23 1 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 APS(0.008)PAPS(0.782)S(0.21)VPLGSEKPSNVSQDR;APS(0.003)PAPS(0.968)S(0.03)VPLGSEKPSNVSQDR;APS(0.119)PAPS(0.832)S(0.048)VPLGSEKPSNVSQDR 160.02 6.55E-10 226840000 6187.5 6926 6474.8 6439.1 7007.4 6302.7 6964 6075.4 5811.6 6028 TRUE FALSE 5661.220633 6475.116141 6035.308616 6935.040598 6728.28042 6659.553427 6499.444267 6022.283418 6415.736617 6774.794149 0.835629911 0.95576574 0.890847527 1.023653331 0.993134296 0.982989783 0.959356716 0.888924931 0.947000968 1 12.7259614 -3.853425727 1.240205873 0.962362558 1.25E-17 0.446070817 0.041613404 12.53801306 2.873379335 0.012882259 26.56697114 0.000140144 3.853425727 -0.962362558 APSPAPS(ph)SVPLGSEKPSNVSQDR ddPTM_A459_MK2206_30min_R2 3 APSPAPSSVPLGSEKPSNVSQDR 23 1 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 APS(0.03)PAPS(0.772)S(0.197)VPLGSEKPSNVSQDR;APS(0.23)PAPS(0.385)S(0.385)VPLGSEKPSNVSQDR;APS(0.131)PAPS(0.434)S(0.434)VPLGSEKPSNVSQDR 109.37 9.30E-06 698675000 149432 194259 148955 185282 170864 170251 179105 147995 180673 191746 TRUE FALSE 160872.6288 184612.3805 153921.0854 170143.8679 164155.0208 176730.0211 155588.2984 167338.4546 196387.611 185489.3437 0.867287714 0.995272164 0.829810933 0.917270311 0.884983566 0.952777219 0.83879912 0.90214592 1.058754142 1 17.50097678 -8.252474164 24.41164476 1.029377072 0.899465132 0.534477612 0.048835005 299.9891483 816856.2499 0.032020357 0.011697633 5.59E-09 8.252474164 -0.12991194 APSPLGPT(ph)RDPVATFLETCR ddPTM_A459_MK2206_30min_R1 1 APSPLGPTRDPVATFLETCR 20 1 I3L2L9;E7EVV8;Q0VG06-3;Q0VG06 I3L2L9 C17orf70;FAAP100 Fanconi anemia-associated protein of 100 kDa 1 APS(0.157)PLGPT(0.84)RDPVAT(0.003)FLETCR 69.024 0.017474 19148000 985.34 1117.6 903.71 624.93 1079.1 1333 1202.5 1025.6 1029.1 924.19 TRUE FALSE 901.5316588 1044.844037 842.3686831 673.0622169 1036.117162 1408.473308 1122.283419 1016.633287 1136.078628 1038.685634 0.867954296 1.005929034 0.810994833 0.647994152 0.99752719 1.356015007 1.080484202 0.978768988 1.093765611 1 10.02054336 -6.516821713 24.98783349 1.107772048 0.841316369 0.504974577 0.125268416 241.5297535 996417.6132 0.0428422 0.044256949 3.04E-07 6.516821713 -0.266455679 APSPTGPALISGAS(ph)PVHCAADGTVELK ddPTM_A459_MK2206_30min_R2 2 APSPTGPALISGASPVHCAADGTVELK 27 0 E7EWD6;Q76L83 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 APSPTGPALIS(0.12)GAS(0.88)PVHCAADGTVELK;APSPTGPALIS(0.158)GAS(0.842)PVHCAADGTVELK 95.834 1.66E-06 16502500 44404 54785 45647 47813 56146 43868 56058 42941 40886 46160 TRUE FALSE 47803.60438 52064.45656 47168.8482 43906.52495 53941.42593 45537.42748 48697.51726 48553.53614 44442.19038 44653.80298 1.070538256 1.16595795 1.056323203 0.983265075 1.207991757 1.019788337 1.090556997 1.08733261 0.99526104 1 15.44649543 -8.261171654 24.85173678 0.997630511 1.085638197 0.247263092 0.061125926 30.45234593 2827538.502 0.046672399 0.015017091 5.48E-09 8.261171654 0.088007686 APSQVSISAS(ph)PR ddPTM_A459_MK2206_30min_R2 2 APSQVSISASPR 12 0 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;Q8IVL1-5;Q8IVL1-6;Q8IVL1-7 A0A0A0MTL4 NAV2 Neuron navigator 2 1 APSQVSISAS(1)PR;APSQVSISAS(1)PR 134.37 0.0029135 0 26356.3 44858 37221 45199 39742 35765 40383 21768.7 37894 40197 TRUE FALSE 28374.15859 42630.41695 38461.92956 41506.09712 38181.52939 37126.06214 35080.66359 24613.94383 41189.95162 38885.37518 0.72968715 1.096309776 0.989110414 1.067396082 0.981899473 0.954756434 0.902155719 0.632987176 1.059265892 1 15.24694004 -7.253344205 3.605652784 0.865904265 0.983303057 0.039326126 0.139570713 0.496617525 14.16222771 0.057249359 0.040180982 5.58E-08 7.253344205 0.117398792 APSS(ph)PVAKPGPVK ddPTM_A459_MK2206_30min_R1 2 APSSPVAKPGPVK 13 1 Q9GZR2;A0A0C4DG31;Q9GZR2-2 Q9GZR2 REXO4 RNA exonuclease 4 1 APS(0.003)S(0.997)PVAKPGPVK;APS(0.042)S(0.958)PVAKPGPVK 143.76 0.0033491 29143000 8999.8 7757.3 8545.1 7410.7 8476.5 6533.6 8375.1 7638.8 7519.8 8008.4 TRUE FALSE 8234.31975 7252.29836 7965.08242 7981.473398 8138.863056 6903.526786 7816.41236 7572.014777 8301.51012 9000.541052 0.914869418 0.805762489 0.884955957 0.886777067 0.904263756 0.767012421 0.868438054 0.8412844 0.922334565 1 13.13579601 -8.542460623 3.162064054 0.99975544 0.858105145 0.51491047 0.04292026 0.186841467 4.909598676 0.040499458 0.010758201 2.87E-09 8.542460623 -0.141650295 APSS(ph)PVAKPGPVK ddPTM_A459_MK2206_30min_R2 1 APSSPVAKPGPVK 13 1 Q9GZR2;A0A0C4DG31;Q9GZR2-2 Q9GZR2 REXO4 RNA exonuclease 4 1 APS(0.175)S(0.825)PVAKPGPVK 97.223 0.0074487 48368000 174990 142930 155040 164350 175270 127530 183050 130990 131730 159320 TRUE FALSE 188387.3689 135832.304 160208.9562 150922.0793 168388.0191 132383.2435 159015.3151 148110.8428 143187.6373 154121.4014 1.222331014 0.881333175 1.039498439 0.979241545 1.092567402 0.85895432 1.031753628 0.961001142 0.929057457 1 17.23370768 -4.746991924 24.99681904 0.977601186 1.222331646 0.54236632 0.068163092 579.0514221 1001811.524 0.015979553 0.342544255 1.79E-05 4.746991924 0.24473046 APST(ph)PVPPSPAPAPGLTK ddPTM_A459_MK2206_30min_R2 2 APSTPVPPSPAPAPGLTK 18 0 F8W126;Q96EZ8-3;Q96EZ8;Q96EZ8-2;F8W0I9;F8VVA6;F8VP44 F8W126 MCRS1 Microspherule protein 1 1 APS(0.044)T(0.867)PVPPS(0.089)PAPAPGLTK;APS(0.01)T(0.99)PVPPSPAPAPGLTK 115.66 0.0024742 13488100 92923 112690 99469 113125 109214 122108 129787 89772 95444 117259 TRUE FALSE 100037.2563 107093.9785 102785.2468 103882.3256 104925.7096 126754.9055 112745.811 101505.5086 103745.5466 113432.8484 0.881907293 0.944117863 0.906132996 0.915804611 0.925002863 1.117444437 0.993943223 0.894851095 0.914598796 1 16.79147896 -6.552862031 24.9999936 0.982986338 0.914683999 0.270236434 0.057400536 323.7956637 269977.9223 0.020587047 0.020587274 2.80E-07 6.552862031 -0.068302339 APSTSPS(ph)FEGTQETYTVAHEENVR ddPTM_A459_MK2206_30min_R2 1 APSTSPSFEGTQETYTVAHEENVR 24 0 Q9BUT9 Q9BUT9 FAM195A Protein FAM195A 1 APS(0.005)T(0.016)S(0.052)PS(0.852)FEGT(0.072)QET(0.002)Y(0.001)TVAHEENVR 80.002 0.00017516 5880500 4618.5 4730.1 3794.4 3452.2 4878.1 3539.5 5507.8 4279.8 3566.8 5983.7 TRUE FALSE 4972.095911 4495.210112 3920.903402 3170.144217 4686.561284 3674.198153 4784.619244 4839.184555 3877.033817 5788.452359 0.858968098 0.77658238 0.677366446 0.547666979 0.809639778 0.634746202 0.826580051 0.836006631 0.669787635 1 12.49896196 -7.292687674 23.95469819 0.81942751 0.714825686 0.200593541 0.111652647 772.3836243 592099.1185 0.046564626 0.031398461 5.10E-08 7.292687674 -0.104601825 APSYS(ph)GLSMVSGVK ddPTM_A459_MK2206_30min_R1 1 APSYSGLSMVSGVK 14 0 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5 A0A2R8Y7K2 SPAST Spastin 1 APS(0.022)YS(0.859)GLS(0.119)MVSGVK 122.52 0.006685 13100000 4517.1 4509.4 4587.8 3701.2 4610.3 3806.3 3932.2 4118.7 3130.7 2779.8 TRUE FALSE 4132.896925 4215.83724 4276.392918 3986.267065 4426.661989 4021.809417 3669.890113 4082.69064 3456.147468 3124.18261 1.322873033 1.349420878 1.368803765 1.275939202 1.416902448 1.28731573 1.174672089 1.306802818 1.106256547 1 11.60926307 -8.349123629 0.600015402 0.99429823 1.349185284 0.783833655 0.056963082 0.351668737 0.302938389 0.056881413 0.026082913 4.48E-09 8.349123629 0.354887053 APSYS(ph)GLSMVSGVK ddPTM_A459_MK2206_30min_R2 1 APSYSGLSMVSGVK 14 0 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5 A0A2R8Y7K2 SPAST Spastin 1 APS(0.399)YS(0.601)GLSMVSGVK 161.82 0.00028026 45001000 35833 49054 57847 47224 39972 50777 50261 27148 49415 41816 TRUE FALSE 38576.40203 46618.04969 59775.59011 43365.64814 38402.49844 52709.35432 43661.67033 30696.33681 53713.02738 40451.54734 0.953644658 1.152441693 1.47770837 1.072039291 0.949345599 1.303024427 1.079357236 0.758842092 1.327836162 1 15.30390727 -7.521050676 24.99664967 1.009823434 1.156605372 0.072295537 0.194957515 175.8796564 2405057.072 0.089676946 0.052795584 3.01E-08 7.521050676 0.146781937 APT(ph)PPSTPVPLPEK ddPTM_A459_MK2206_30min_R2 3 APTPPSTPVPLPEK 14 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 APT(0.997)PPS(0.003)TPVPLPEK;APT(0.992)PPS(0.008)TPVPLPEK;APT(0.997)PPS(0.003)TPVPLPEK 117.08 0.0061366 3890000 93139 67052 71463 82084 66431 63988 84886 64133 50275 83092 TRUE FALSE 100269.7935 63722.29518 73845.54075 75377.47463 63822.58515 66423.10818 73740.36623 72515.4033 54647.82862 80380.71484 1.247435951 0.792756015 0.918697238 0.937755714 0.794003702 0.826356276 0.917388784 0.902149271 0.679862436 1 16.29456179 -4.755061736 24.99569017 0.862601846 1.247436593 0.634503784 0.087481584 133.3718998 522671.1037 0.020825763 0.191355322 1.76E-05 4.755061736 0.384834746 APTAALPQGVVMAAS(ph)PGSLHSPQQLAEEATR ddPTM_A459_MK2206_30min_R2 3 APTAALPQGVVMAASPGSLHSPQQLAEEATR 31 0 E9PAR2;Q03060-22;Q03060-15;Q03060-16;Q03060-31;Q03060-20;Q03060-21;Q03060-32;Q03060-26;Q03060-29;Q03060-7;Q03060-12;G5E998;C9IYM9;C9K092;J3KR46;Q03060;Q03060-6;Q03060-2;Q03060-23;Q03060-9;Q03060-11;Q03060-24;Q03060-27;Q03060-8;E9PB41;Q03060-10;Q03060-28;Q03060-19;Q03060-14;Q03060-13;Q03060-17;Q03060-30;Q03060-1 E9PAR2 CREM cAMP-responsive element modulator 1 APTAALPQGVVMAAS(0.737)PGS(0.259)LHS(0.005)PQQLAEEATR;APTAALPQGVVMAAS(0.986)PGS(0.014)LHSPQQLAEEATR;APT(0.001)AALPQGVVMAAS(0.839)PGS(0.128)LHS(0.029)PQQLAEEAT(0.003)R 112.47 2.30E-11 16196800 27950.8 47966.6 35371.5 52606.6 46730.3 47045.9 44554.9 36641.9 39198.2 34896.5 TRUE FALSE 30090.73474 45584.64839 36550.76816 48308.4725 44895.43362 48836.26469 38704.78811 41431.12214 42607.58858 33757.83006 0.891370526 1.350342967 1.082734527 1.431030146 1.329926525 1.446664806 1.146542537 1.227304067 1.262154247 1 15.04293455 -5.730934797 24.99998732 1.278387839 1.132368653 0.153772814 0.161271711 395.4941886 324123.9034 0.042233922 0.073140849 1.86E-06 5.730934797 -0.146019186 APTAALPQGVVMAASPGS(ph)LHSPQQLAEEATR ddPTM_A459_MK2206_30min_R2 1 APTAALPQGVVMAASPGSLHSPQQLAEEATR 31 0 E9PAR2;Q03060-22;Q03060-15;Q03060-16;Q03060-31;Q03060-20;Q03060-21;Q03060-32;Q03060-26;Q03060-29;Q03060-7;Q03060-12;G5E998;C9IYM9;C9K092;J3KR46;Q03060;Q03060-6;Q03060-2;Q03060-23;Q03060-9;Q03060-11;Q03060-24;Q03060-27;Q03060-8;E9PB41;Q03060-10;Q03060-28;Q03060-19;Q03060-14;Q03060-13;Q03060-17;Q03060-30;Q03060-1 E9PAR2 CREM cAMP-responsive element modulator 1 APTAALPQGVVMAAS(0.249)PGS(0.751)LHSPQQLAEEATR 124.39 2.68E-17 6036400 15820 23225 18529 29081 21625 25997 22461 19151 23625 16880 TRUE FALSE 17031.19136 22071.68027 19146.74761 26704.98927 20775.89384 26986.33405 19511.84372 21654.10146 25679.8598 16329.20698 1.042989496 1.351668841 1.172546078 1.635412504 1.27231493 1.652642047 1.19490455 1.32609633 1.572633614 1 13.99516711 -4.117459709 1.245826845 1.380637618 1.17E-10 0.165280953 0.203013933 10.6497417 4.370882549 0.055795386 28.3106819 7.63E-05 4.117459709 -1.380637618 APTSVT(ph)PVAPGK ddPTM_A459_MK2206_30min_R1 1 APTSVTPVAPGK 12 0 Q8IZD4;Q8IZD4-2;F5GZK9 Q8IZD4 DCP1B mRNA-decapping enzyme 1B 1 APT(0.225)S(0.141)VT(0.635)PVAPGK 122.46 0.0082709 4211100 2066.9 2379.1 2406.2 2035.6 1741.5 1750.8 2242.4 1941.4 2097.1 1807.7 TRUE FALSE 1891.099301 2224.220158 2242.873848 2192.382265 1672.132367 1849.928783 2092.813587 1924.426544 2315.10105 2031.651523 0.930818735 1.094784284 1.103965824 1.079113342 0.823040934 0.910554178 1.030104604 0.947222751 1.139516803 1 10.98843725 APTSVT(ph)PVAPGK ddPTM_A459_MK2206_30min_R2 3 APTSVTPVAPGK 12 0 Q8IZD4;Q8IZD4-2;F5GZK9 Q8IZD4 DCP1B mRNA-decapping enzyme 1B 1 APT(0.006)S(0.097)VT(0.896)PVAPGK;APT(0.117)S(0.253)VT(0.63)PVAPGK;APT(0.008)S(0.304)VT(0.688)PVAPGK 124.12 0.0073204 3669500 78114 81938 65414 80779 73068 67726 86699 61199 61655 84600 TRUE FALSE 84094.4679 77869.07807 67594.87011 74179.0973 70198.98318 70303.36039 75315.31716 69197.91943 67017.64045 81839.50893 1.027553427 0.951485158 0.825944229 0.906397146 0.857763983 0.859039372 0.920280658 0.845531948 0.818891038 1 16.32050987 -4.986473013 3.647014785 0.874777001 1.021910735 0.45793361 0.050927945 0.180441961 5.07601368 0.012207206 0.054891339 1.03E-05 4.986473013 0.147133734 APVAS(ph)PAALGSTATASPAAPAR ddPTM_A459_MK2206_30min_R2 1 APVASPAALGSTATASPAAPAR 22 0 A0A0C4DFM2;Q6ZN55;Q6ZN55-2 A0A0C4DFM2 ZNF574 Zinc finger protein 574 1 APVAS(1)PAALGSTATASPAAPAR 141.3 7.01E-06 5668300 7929.8 9010.8 10936 10702 9098 11615 8159.3 5708.1 9579.6 8094.4 TRUE FALSE 8536.911585 8563.336775 11300.60078 9827.612366 8740.766806 12057.01696 7087.974109 6454.168269 10412.81629 7830.280391 1.090243409 1.093618153 1.443192353 1.255077963 1.116277626 1.53979377 0.905200549 0.824257619 1.329813975 1 12.93484825 -7.297100755 24.99971934 1.000172819 1.251035413 0.291562988 0.183778472 777.2006228 544838.4649 0.076290932 0.051437053 5.05E-08 7.297100755 0.250862594 APVASPAALGST(ph)ATASPAAPAR ddPTM_A459_MK2206_30min_R1 1 APVASPAALGSTATASPAAPAR 22 0 A0A0C4DFM2;Q6ZN55;Q6ZN55-2 A0A0C4DFM2 ZNF574 Zinc finger protein 574 1 APVASPAALGS(0.054)T(0.464)AT(0.241)AS(0.241)PAAPAR 166.34 2.73E-11 4094300 1045.7 846.96 848.59 1018.1 761.27 806.63 980.3 840.13 784.08 736.04 TRUE FALSE 956.7577238 791.8227501 790.9900751 1096.514238 730.9470039 852.3006935 914.9059757 832.784832 865.5879219 827.226192 1.156585385 0.957202223 0.956195636 1.325531335 0.883612017 1.030311542 1.105992514 1.006719613 1.04637393 1 9.692138055 APVASPAALGSTATAS(ph)PAAPAR ddPTM_A459_MK2206_30min_R1 1 APVASPAALGSTATASPAAPAR 22 0 A0A0C4DFM2;Q6ZN55;Q6ZN55-2 A0A0C4DFM2 ZNF574 Zinc finger protein 574 1 APVASPAALGST(0.008)AT(0.002)AS(0.99)PAAPAR 258.83 6.19E-54 5955000 653.15 704.83 789.64 651.63 440.15 604.56 628.75 606.42 459.48 695.99 TRUE FALSE 597.5961627 658.9454389 736.0414369 701.8186555 422.6178935 638.7896647 586.8072347 601.1181339 507.2445903 782.2144957 0.763979913 0.842410161 0.940971359 0.897220212 0.540283894 0.816642581 0.750187114 0.768482478 0.648472501 1 9.611420461 APVASPAALGSTATAS(ph)PAAPAR ddPTM_A459_MK2206_30min_R2 4 APVASPAALGSTATASPAAPAR 22 0 A0A0C4DFM2;Q6ZN55;Q6ZN55-2 A0A0C4DFM2 ZNF574 Zinc finger protein 574 1 APVASPAALGS(0.016)T(0.309)AT(0.069)AS(0.605)PAAPAR;APVASPAALGS(0.024)T(0.015)AT(0.016)AS(0.945)PAAPAR;APVASPAALGS(0.109)T(0.109)AT(0.106)AS(0.676)PAAPAR;APVASPAALGS(0.022)T(0.443)AT(0.026)AS(0.509)PAAPAR 218.74 5.00E-26 17075700 28342.8 36668.1 29482.1 34113.5 32599.5 36526.6 34001.5 26283.9 26566.7 34292.3 TRUE FALSE 30512.74656 34847.21547 30465.0185 31326.31793 31319.47983 37916.64536 29537.06221 29719.29598 28877.42354 33173.34506 0.919797099 1.050458295 0.918358352 0.944321951 0.944115819 1.142985288 0.890385403 0.895878782 0.870500804 1 15.01773687 APVDEDRLS(ph)PLVAADSLLEHVR ddPTM_A459_MK2206_30min_R1 5 APVDEDRLSPLVAADSLLEHVR 22 1 Q01094 Q01094 E2F1 Transcription factor E2F1 1 APVDEDRLS(1)PLVAADSLLEHVR;APVDEDRLS(1)PLVAADSLLEHVR;APVDEDRLS(1)PLVAADSLLEHVR;APVDEDRLS(1)PLVAADSLLEHVR;APVDEDRLS(1)PLVAADSLLEHVR 154.75 1.14E-08 23856400 8662.36 8083.15 8707.63 7921.28 10170.06 8590.07 8892.43 8190.9 6717.81 6613.64 TRUE FALSE 7925.580794 7556.935466 8116.580336 8531.378358 9764.964975 9076.43234 8299.23222 8119.287825 7416.150389 7432.987654 1.066271217 1.016675369 1.091967418 1.147772438 1.313733512 1.221101496 1.116540563 1.092331671 0.997734792 1 12.8597265 -8.087973888 2.249261516 0.994973928 1.143011811 0.337628474 0.077703273 0.432263605 3.932879056 0.078405252 0.024945669 8.17E-09 8.087973888 0.148037884 APVDEDRLS(ph)PLVAADSLLEHVR ddPTM_A459_MK2206_30min_R2 3 APVDEDRLSPLVAADSLLEHVR 22 1 Q01094 Q01094 E2F1 Transcription factor E2F1 1 APVDEDRLS(1)PLVAADSLLEHVR;APVDEDRLS(1)PLVAADSLLEHVR;APVDEDRLS(1)PLVAADSLLEHVR 108.12 2.40E-05 14048100 39550.6 51436.6 42089.5 52018 54042 56002.4 49805.4 46811.5 50181.3 44624.5 TRUE FALSE 42578.62435 48882.33324 43492.74292 47767.963 51920.03954 58133.61057 43265.89115 52929.92378 54545.97877 43168.40622 0.98633765 1.132363632 1.007513289 1.106549145 1.20273237 1.3466703 1.002258247 1.226126429 1.263562488 1 15.39768821 -6.055481364 4.129750786 1.184135006 1.0511493 0.22849113 0.10709588 0.320298115 11.15618778 0.031237652 0.042712526 8.80E-07 6.055481364 -0.132985706 APVHFVEPLS(ph)PTGVAGHR ddPTM_A459_MK2206_30min_R1 4 APVHFVEPLSPTGVAGHR 18 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 APVHFVEPLS(0.927)PT(0.073)GVAGHR;APVHFVEPLS(0.811)PT(0.189)GVAGHR;APVHFVEPLS(0.976)PT(0.024)GVAGHR;APVHFVEPLS(0.988)PT(0.012)GVAGHR 148.2 0.00013266 114580600 9316.6 8596.8 8208.87 6656.06 7687.5 7241 7481.6 5958.39 6597.51 6087.55 TRUE FALSE 8524.174247 8037.146757 7651.674776 7168.710894 7381.290596 7650.979162 6982.516115 5906.296424 7283.344774 6841.721653 1.245910705 1.174725773 1.118384401 1.047793415 1.078864498 1.118282729 1.020578806 0.86327634 1.064548537 1 12.7401437 -1.924038514 0.278282218 0.970130444 2.667699596 0.642112504 0.05896752 26.62721456 0.45908082 0.069555418 21.01709795 0.011911364 1.924038514 1.697569152 APVHFVEPLS(ph)PTGVAGHR ddPTM_A459_MK2206_30min_R2 4 APVHFVEPLSPTGVAGHR 18 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 APVHFVEPLS(0.8)PT(0.2)GVAGHR;APVHFVEPLS(0.994)PT(0.006)GVAGHR;APVHFVEPLS(0.961)PT(0.039)GVAGHR;APVHFVEPLS(0.835)PT(0.165)GVAGHR 128.29 0.00045393 108479000 70459 81431 57213.8 69943 55740 54661.7 58016 56073 46071.3 54363 TRUE FALSE 75853.39521 77387.25495 59121.27954 64228.43316 53551.36753 56741.8893 50398.42951 63401.93363 50078.4984 52589.13976 1.442377562 1.471544416 1.124210812 1.221325039 1.018297081 1.078965915 0.958342915 1.205608875 0.952259319 1 15.68247728 -5.324018157 1.092961562 1.045741486 1.540586748 0.75666525 0.088017621 0.376037002 0.657457237 0.02809341 0.174556245 4.74E-06 5.324018157 0.494845262 APVPEPGLDLS(ph)LSPRPDSPQPR ddPTM_A459_MK2206_30min_R1 2 APVPEPGLDLSLSPRPDSPQPR 22 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 APVPEPGLDLS(0.467)LS(0.415)PRPDS(0.118)PQPR;APVPEPGLDLS(0.514)LS(0.467)PRPDS(0.019)PQPR 59.512 0.0093559 24854000 2406.2 2474.07 1998.57 2052.74 2167.41 2462.59 2518.5 2210.45 1908.34 2196.82 TRUE FALSE 2201.540055 2313.007593 1862.912637 2210.84239 2081.07747 2602.019718 2350.49546 2191.124269 2106.718772 2468.978647 0.891680476 0.936827703 0.754527642 0.895448162 0.842890024 1.053885063 0.952011255 0.887461814 0.853275412 1 11.26969864 APVPEPGLDLS(ph)LSPRPDSPQPR ddPTM_A459_MK2206_30min_R2 1 APVPEPGLDLSLSPRPDSPQPR 22 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 APVPEPGLDLS(0.596)LS(0.222)PRPDS(0.182)PQPR 50.271 0.029262 6462500 10376 10041 11007 10834 13854 13901 13608 9250.2 8844.4 12874 TRUE FALSE 11170.39454 9542.378541 11373.96789 9948.827544 13310.02235 14430.0123 11821.25325 10459.2329 9613.669925 12453.92243 0.89693786 0.766214708 0.913283983 0.798850932 1.068741388 1.158672087 0.949199203 0.839834434 0.77193912 1 13.60431258 -6.243235749 24.93120978 0.965643228 0.843240079 0.228586982 0.108803591 1391.170971 1905310.43 0.035787597 0.04610996 5.71E-07 6.243235749 -0.122403149 APVPEPGLDLSLS(ph)PRPDSPQPR ddPTM_A459_MK2206_30min_R1 2 APVPEPGLDLSLSPRPDSPQPR 22 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 APVPEPGLDLS(0.084)LS(0.915)PRPDS(0.001)PQPR;APVPEPGLDLS(0.354)LS(0.626)PRPDS(0.02)PQPR 89.392 0.00024873 11340000 2518.7 3188.79 2736.4 2582.11 2753.34 3189.61 2725.4 2380.69 2174.47 2238.3 TRUE FALSE 2304.471339 2981.199191 2550.660792 2780.98456 2643.668638 3370.202962 2543.593539 2359.875878 2400.513938 2515.597502 0.916073154 1.185085924 1.013938354 1.105496629 1.050910821 1.339722654 1.011128981 0.93809756 0.954251996 1 11.29668539 -4.726393385 23.6827813 1.070474786 0.916070816 0.134689752 0.11399819 6236.761207 4214084.475 0.029456558 5.414032054 1.88E-05 4.726393385 -0.154403969 APVPEPGLDLSLSPRPDS(ph)PQPR ddPTM_A459_MK2206_30min_R1 1 APVPEPGLDLSLSPRPDSPQPR 22 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 APVPEPGLDLS(0.007)LS(0.02)PRPDS(0.973)PQPR 79.462 0.00071622 110330000 1560.1 1093.9 1211.1 1343.2 1659.8 1201 1621.4 1599.8 1054.9 1169.2 TRUE FALSE 1427.405303 1022.686911 1128.893906 1446.653497 1593.686651 1268.999582 1513.239364 1585.813117 1164.56063 1314.049323 1.086264631 0.778271328 0.859095535 1.10091263 1.212805808 0.965716857 1.151584905 1.206813998 0.886238142 1 10.35980371 -5.765562096 24.99859917 1.087880795 0.894916563 0.276527483 0.121979338 112.8477889 684272.2918 0.033034331 0.051056588 1.72E-06 5.765562096 -0.192964231 APVPEPGLDLSLSPRPDS(ph)PQPR ddPTM_A459_MK2206_30min_R2 5 APVPEPGLDLSLSPRPDSPQPR 22 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 APVPEPGLDLS(0.094)LS(0.387)PRPDS(0.519)PQPR;APVPEPGLDLS(0.002)LS(0.033)PRPDS(0.965)PQPR;APVPEPGLDLSLS(0.009)PRPDS(0.991)PQPR;APVPEPGLDLSLS(0.001)PRPDS(0.999)PQPR;APVPEPGLDLS(0.001)LS(0.01)PRPDS(0.989)PQPR 130.45 1.34E-05 209487200 183741.8 226056 238785 254267 266895 282068 290118 207556 243770 260048 TRUE FALSE 197809.2135 214830.3878 246745.9727 233492.5727 256415.3613 292802.2954 252025.1581 234684.2818 264972.674 251562.6551 0.786321855 0.853983624 0.980852952 0.928168661 1.019290249 1.163933873 1.00183852 0.932905887 1.053306875 1 17.94055824 -5.045147477 0.978460048 1.025312561 0.713087641 0.63604443 0.060114859 0.949959714 0.9680361 0.022396009 0.28602788 9.01E-06 5.045147477 -0.31222492 APVPGT(ph)PDSLSSGSSR ddPTM_A459_MK2206_30min_R1 2 APVPGTPDSLSSGSSR 16 0 A0A087WYB4;Q9UJZ1;Q9UJZ1-2 A0A087WYB4 STOML2 "Stomatin-like protein 2, mitochondrial" 1 APVPGT(0.936)PDS(0.064)LSSGSSR;APVPGT(1)PDSLSSGSSR 190.34 1.87E-06 56282000 6494.2 6319.1 5912.2 5724.9 6834.2 6542.9 7104 5727.8 6224.9 6155.8 TRUE FALSE 5941.834188 5907.725441 5510.896336 6165.83279 6561.979342 6913.353344 6630.105122 5677.722448 6872.000631 6918.426978 0.858841787 0.853911657 0.796553372 0.891218887 0.948478514 0.999266649 0.958325519 0.820666673 0.993289465 1 12.75622834 -6.039364353 3.781336465 0.946241476 0.838115436 0.508397672 0.051401886 0.206072547 6.188377408 0.015808779 0.022100747 9.13E-07 6.039364353 -0.108126041 APVPGT(ph)PDSLSSGSSR ddPTM_A459_MK2206_30min_R2 3 APVPGTPDSLSSGSSR 16 0 A0A087WYB4;Q9UJZ1;Q9UJZ1-2 A0A087WYB4 STOML2 "Stomatin-like protein 2, mitochondrial" 1 APVPGT(0.995)PDS(0.005)LSSGSSR;APVPGT(0.985)PDS(0.013)LS(0.001)SGS(0.001)SR;APVPGT(0.987)PDS(0.001)LS(0.006)S(0.002)GS(0.003)S(0.001)R 192.4 2.48E-06 63194000 147397 162271 165518 175059 139394 157186 167049 116609 171168 141076 TRUE FALSE 158681.8276 154212.8581 171036.2875 160756.1197 133920.6912 163167.8234 145115.2656 131850.1967 186055.8832 136472.7017 1.162736765 1.129990512 1.253263733 1.177936083 0.981300213 1.195607776 1.063328152 0.966128721 1.363319411 1 17.05825288 -6.047757743 24.94324803 1.095152421 1.183263814 0.120395798 0.113947538 822.7500872 429710.2095 0.032192192 0.041561046 8.96E-07 6.047757743 0.088111393 APVPSTCSSTFPEELS(ph)PPSHQAK ddPTM_A459_MK2206_30min_R1 6 APVPSTCSSTFPEELSPPSHQAK 23 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;Q14980-4;Q14980-3;F5H6Y5;F5H4J1;F5H763;F5H0Z7 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 APVPSTCSSTFPEELS(0.906)PPS(0.094)HQAK;APVPSTCSSTFPEELS(0.757)PPS(0.243)HQAK;APVPSTCSSTFPEELS(0.999)PPS(0.001)HQAK;APVPSTCSSTFPEELS(0.96)PPS(0.04)HQAK;APVPSTCSSTFPEELS(0.943)PPS(0.057)HQAK;APVPSTCSSTFPEELS(0.999)PPS(0.001)HQAK 126.68 6.31E-06 772928000 25654.9 26010.5 26788.7 22850.3 28069.4 25537.7 27203.9 24388.1 24036.9 21395.5 TRUE FALSE 23472.81604 24317.21172 24970.35768 24610.23407 26951.33636 26983.6225 25389.17747 24174.87741 26535.62177 24046.13607 0.976157499 1.011273148 1.038435348 1.023458987 1.12081776 1.122160435 1.055852691 1.005353931 1.103529552 1 14.55351747 -5.295315124 1.279329894 1.067614301 0.975535659 0.314343339 0.041585045 0.829685955 2.088507914 0.013724469 0.078748709 5.07E-06 5.295315124 -0.092078642 APVPSTCSSTFPEELS(ph)PPSHQAK ddPTM_A459_MK2206_30min_R2 6 APVPSTCSSTFPEELSPPSHQAK 23 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;Q14980-4;Q14980-3;F5H6Y5;F5H4J1;F5H763;F5H0Z7 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 APVPSTCSSTFPEELS(0.723)PPS(0.277)HQAK;APVPSTCSSTFPEELS(0.984)PPS(0.016)HQAK;APVPSTCSSTFPEELS(0.974)PPS(0.026)HQAK;APVPSTCSSTFPEELS(0.999)PPS(0.001)HQAK;APVPSTCSSTFPEELS(0.996)PPS(0.004)HQAK;APVPSTCSSTFPEELS(0.999)PPS(0.001)HQAK 148.15 7.41E-08 1017562100 659121 859310 685380 793631 854761 746235 931593 644389 694531 786088 TRUE FALSE 709583.8105 816637.915 708230.2271 728788.8086 821198.7883 774633.4958 809273.7201 728612.8548 754940.051 760438.0129 0.933125118 1.073904646 0.931345113 0.958380297 1.079902338 1.018667508 1.064220497 0.958148912 0.992770006 1 19.53647113 APVQPQQS(ph)PAAAPGGTDEKPSGK ddPTM_A459_MK2206_30min_R1 2 APVQPQQSPAAAPGGTDEKPSGK 23 1 Q13200;C9JPC0;F8WBS8 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK 141.71 1.12E-06 44292000 9714.3 10702.9 11640.9 8850.7 8495.2 9264.9 9737.7 9656.5 9757.9 9095.5 TRUE FALSE 8888.047773 10006.13926 10850.74814 9532.382448 8156.818195 9789.470631 9088.1158 9572.074239 10772.26862 10222.31921 0.869474685 0.978852163 1.06147616 0.932506827 0.797942035 0.957656519 0.889046372 0.936389683 1.053798889 1 13.31943493 -8.229509778 10.03945682 1.026856495 0.929545328 0.259391193 0.066856269 0.77098664 241.098663 0.048866963 0.018151478 5.90E-09 8.229509778 -0.097311167 APVQPQQS(ph)PAAAPGGTDEKPSGK ddPTM_A459_MK2206_30min_R2 4 APVQPQQSPAAAPGGTDEKPSGK 23 1 Q13200;C9JPC0;F8WBS8 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(0.813)PAAAPGGT(0.173)DEKPS(0.014)GK;APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK 158.29 8.69E-10 199207000 327864 330589 331810 343361 328788 242375 365039 276385 250113 341272 TRUE FALSE 352965.5199 314172.431 342872.3798 315307.3079 315878.1311 251598.7505 317108.9408 312509.4685 271867.3766 330136.3226 1.06915082 0.951644546 1.038578176 0.955082147 0.9568112 0.762105631 0.960539387 0.946607347 0.823500348 1 18.33270235 -6.178025032 2.27111217 0.898538051 1.011228657 0.324117669 0.071631914 0.36469193 3.689687518 0.022863261 0.031068238 6.64E-07 6.178025032 0.112690606 APVS(ph)PLK ddPTM_A459_MK2206_30min_R1 1 APVSPLK 7 0 Q9UBS0 Q9UBS0 RPS6KB2 Ribosomal protein S6 kinase beta-2 1 APVS(1)PLK 92.051 0.02753 8503200 5256.3 5599.1 5118.7 4675.9 4541.9 4532 4688.4 4159.4 4551.5 3987.4 TRUE FALSE 4809.224083 5234.597572 4771.256906 5036.038628 4360.986505 4788.597924 4375.64539 4123.034804 5024.644713 4481.389215 1.073154741 1.168074747 1.064682552 1.123767293 0.973132726 1.068552115 0.976403785 0.920034973 1.121224797 1 12.12973032 -6.254869821 24.96721996 1.007151802 1.108699668 0.40487645 0.057861264 494.027415 1877519.617 0.016642799 0.020966017 5.56E-07 6.254869821 0.101547866 APVSGSRS(ph)PDREASGSGGR ddPTM_A459_MK2206_30min_R1 2 APVSGSRSPDREASGSGGR 19 2 Q8N5F7 Q8N5F7 NKAP NF-kappa-B-activating protein 1 APVS(0.011)GS(0.041)RS(0.735)PDREAS(0.167)GS(0.046)GGR;APVS(0.033)GS(0.017)RS(0.945)PDREAS(0.002)GS(0.003)GGR 77.027 0.0094339 27465000 861.25 791.7 790.88 873.75 1132.92 773.55 681.9 1076.37 408.41 191.22 TRUE FALSE 787.9961649 740.1601861 737.1972691 941.0463764 1087.793397 817.3477325 636.4116952 1066.959411 450.865681 214.9097772 3.666637112 3.444050781 3.430263986 4.378797412 5.061628239 3.803213344 2.961297077 4.964685294 2.097930056 1 7.747587309 -8.472168305 4.779520322 1.008865275 3.933236862 0.707241653 0.639891186 0.097993992 4.818225785 0.636766738 0.165913567 3.37E-09 8.472168305 2.924371587 APVSSTESVIQSNTPT(ph)PPPSQPLNETAEEESR ddPTM_A459_MK2206_30min_R1 3 APVSSTESVIQSNTPTPPPSQPLNETAEEESR 32 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 APVSSTESVIQS(0.004)NT(0.029)PT(0.96)PPPS(0.008)QPLNETAEEESR;APVSSTESVIQS(0.002)NT(0.076)PT(0.922)PPPS(0.001)QPLNETAEEESR;APVSSTESVIQS(0.007)NT(0.074)PT(0.919)PPPSQPLNETAEEESR 119.64 1.49E-16 41471300 2022.34 1802.08 1698.33 1216.26 1920.22 1878.1 2021.63 1809.87 1250.17 1567 TRUE FALSE 1850.329363 1684.764264 1583.052091 1309.936556 1843.733571 1984.436399 1886.770751 1794.046497 1380.129645 1761.13179 1.050647869 0.956637245 0.898883377 0.743803822 1.046902669 1.126796081 1.071339897 1.01868952 0.783660628 1 10.78228716 -4.758378645 23.99189349 0.963954842 1.050648059 0.05069279 0.115967504 209.5887146 1642392.449 0.031221897 0.212418079 1.74E-05 4.758378645 0.086693217 APVSSTESVIQSNTPT(ph)PPPSQPLNETAEEESR ddPTM_A459_MK2206_30min_R2 3 APVSSTESVIQSNTPTPPPSQPLNETAEEESR 32 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 APVSSTESVIQSNT(0.003)PT(0.994)PPPS(0.003)QPLNETAEEESR;APVSSTESVIQSNT(0.001)PT(0.998)PPPS(0.001)QPLNETAEEESR;APVSSTESVIQSNT(0.106)PT(0.893)PPPSQPLNETAEEESR 162.52 5.85E-24 37271500 23780.8 26803.6 20173.8 29859.2 22108 30671.2 24572.9 22018.3 23765.3 19652.2 TRUE FALSE 25601.47633 25472.5722 20846.38442 27419.60785 21239.92884 31838.41401 21346.44871 24896.16741 25832.36284 19010.95032 1.346669993 1.339889472 1.096546152 1.442306007 1.117247085 1.674740792 1.122850165 1.309569852 1.358814914 1 14.21454303 -11.03752989 2.659198348 0.984173805 1.309678028 0.242980091 0.165201727 16718067.95 16695785.32 1919036.151 0.040296374 9.17E-12 11.03752989 0.325504223 APYS(ph)PTTSK ddPTM_A459_MK2206_30min_R1 4 APYSPTTSK 9 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 APYS(0.972)PT(0.025)T(0.002)S(0.001)K;APYS(0.975)PT(0.024)T(0.001)SK;APYS(0.959)PT(0.036)T(0.004)S(0.001)K;APYS(0.927)PT(0.072)T(0.001)SK 149.33 0.0014374 171659000 21946 22255.3 22577.1 18425.6 21994.3 18633.9 23229.9 21684.2 20408.1 19836.1 TRUE FALSE 20079.37746 20806.47592 21044.62936 19844.7429 21118.22046 19688.93531 21680.27576 21494.61733 22529.59503 22293.54582 0.900681193 0.933295945 0.943978563 0.890156418 0.947279568 0.883167508 0.972491138 0.964163238 1.010588231 1 14.44433848 -7.665400957 1.760364741 0.999510709 0.918931073 0.679594237 0.023602406 0.211564519 1.276106766 0.015642773 0.00679831 2.16E-08 7.665400957 -0.080579636 APYS(ph)PTTSK ddPTM_A459_MK2206_30min_R2 3 APYSPTTSK 9 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 APY(0.006)S(0.912)PT(0.037)T(0.037)S(0.007)K;APYS(0.951)PT(0.049)T(0.001)SK;APYS(0.97)PT(0.023)T(0.003)S(0.003)K 131.83 0.00351 174617000 800148 830058 823766 846571 775958 685363 874540 719390 719909 850900 TRUE FALSE 861407.9461 788838.5267 851229.9473 777403.4413 745489.99 711444.9692 759711.8475 813416.743 782525.3835 823135.2027 1.046496303 0.958334092 1.034131385 0.944441981 0.905671374 0.864311193 0.922949043 0.988193362 0.950664461 1 19.65076989 -5.858672749 6.17573558 0.932934916 1.007182362 0.378723173 0.042564537 0.225815945 12.00856741 0.012555302 0.018864419 1.38E-06 5.858672749 0.074247446 APYTCGGDSDQYVLMSS(ph)PVGR ddPTM_A459_MK2206_30min_R2 1 APYTCGGDSDQYVLMSSPVGR 21 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 APYTCGGDSDQYVLMS(0.039)S(0.961)PVGR 198.88 5.25E-24 0 7326.6 8088.4 6570.9 9072.4 9053.9 12593 10239 9381.3 11730 9046.5 TRUE FALSE 7887.530129 7686.741818 6789.970526 8331.155899 8698.398394 13072.23544 8894.607001 10607.46812 12750.2542 8751.313446 0.901296723 0.878352931 0.775880166 0.951989201 0.993953473 1.493745541 1.016373948 1.212100125 1.456953208 1 13.09528385 -6.556688724 9.821446152 1.236660398 0.882524523 0.552926143 0.153732346 0.282283047 78.78101048 0.049367699 0.049484841 2.78E-07 6.556688724 -0.354135874 AQAEAQQPTFDALRDELR ddPTM_A459_MK2206_30min_R2 2 AQAEAQQPTFDALRDELR 18 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 92.427 0.014078 10690700 17674 29148.6 24542.4 29325.7 30493.8 27113.2 30231.9 16219.5 28507.6 27546.5 FALSE TRUE 19027.13503 27701.12291 25360.63137 26929.6965 29296.46019 28145.01183 26262.41521 18339.44434 30987.13952 26647.65996 0.714026487 1.039533038 0.951702003 1.010583914 1.099400857 1.056190745 0.985543018 0.688219692 1.162846553 1 14.70172123 -4.755574183 24.98108579 0.992928121 0.714026032 0.340237214 0.118889029 230.6981188 982491.9792 0.029456981 0.257927782 1.76E-05 4.755574183 -0.278902089 AQAVS(ph)EDAGGNEGR ddPTM_A459_MK2206_30min_R1 2 AQAVSEDAGGNEGR 14 0 P55884;P55884-2;C9JZG1 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 AQAVS(1)EDAGGNEGR;AQAVS(1)EDAGGNEGR 207.66 6.61E-06 13639200 3137.4 3063.9 2835.8 2758.6 2982.1 2804.6 3029.7 2989.5 2311.53 2112.28 TRUE FALSE 2870.547655 2864.439553 2643.313797 2971.06785 2863.316642 2963.394028 2827.594241 2963.363117 2551.821815 2373.965193 1.209178493 1.20660554 1.113459374 1.251521235 1.206132529 1.248288744 1.191084962 1.248275722 1.074919642 1 11.21308307 -8.446844095 3.845141972 1.001379798 1.207645757 0.771443904 0.038371146 0.092689469 2.562435797 0.036742145 0.009668956 3.57E-09 8.446844095 0.206265959 AQAVS(ph)EDAGGNEGR ddPTM_A459_MK2206_30min_R2 1 AQAVSEDAGGNEGR 14 0 P55884;P55884-2;C9JZG1 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 AQAVS(1)EDAGGNEGR 148.97 0.0004492 11832000 8238.9 15126 11799 13857 14663 11731 13946 13349 12210 10165 TRUE FALSE 8869.676519 14374.86484 12192.37277 12724.83877 14087.25694 12177.43143 12114.87345 15093.76013 13272.00373 9833.316882 0.902002511 1.461853107 1.23990439 1.294053566 1.432604798 1.238384929 1.23202309 1.534961226 1.349697553 1 13.26346242 -4.74947872 24.99161392 1.322574369 0.902001558 0.41954428 0.142947036 506.6241885 1058517.937 0.033505099 0.54684884 1.78E-05 4.74947872 -0.420572811 AQAVS(ph)EEEEEEEGK ddPTM_A459_MK2206_30min_R1 3 AQAVSEEEEEEEGK 14 0 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVS(1)EEEEEEEGK;AQAVS(1)EEEEEEEGK;AQAVS(1)EEEEEEEGK 233.14 1.33E-13 69511100 9442.5 10597.1 11486.8 9813.2 8776.9 7225.8 9337.3 9105.3 11270.1 10775.6 TRUE FALSE 8639.36579 9907.226864 10707.10802 10569.01436 8427.297488 7634.918552 8714.425754 9025.693322 12441.66723 12110.56268 0.713374433 0.818064951 0.884113175 0.87271043 0.695863414 0.630434667 0.719572326 0.745274482 1.027340146 1 13.56397828 -8.261856586 24.99002026 1.013670105 0.761966083 0.644472119 0.075373813 26.1761234 1567625.806 0.069025195 0.021969575 5.47E-09 8.261856586 -0.251704023 AQAVS(ph)EEEEEEEGK ddPTM_A459_MK2206_30min_R2 4 AQAVSEEEEEEEGK 14 0 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVS(1)EEEEEEEGK;AQAVS(1)EEEEEEEGK;AQAVS(1)EEEEEEEGK;AQAVS(1)EEEEEEEGK 203.52 3.45E-05 429946800 208299 164431 178940 173084 136761 123121 238430 177087 115466 183978 TRUE FALSE 224246.5316 156265.5956 184905.7703 158942.4835 131391.076 127806.4559 207123.8546 200232.8789 125509.024 177974.8129 1.259990264 0.878020845 1.038943473 0.893061669 0.738256576 0.718115411 1.163781836 1.125063011 0.705206663 1 17.44131356 -4.757050375 24.94704124 0.920580315 1.259990782 0.301057466 0.156354047 176.2974592 1001941.763 0.040622505 0.311521513 1.75E-05 4.757050375 0.339410467 AQAVS(ph)EEEEEEEGKSSSPK ddPTM_A459_MK2206_30min_R1 2 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVS(0.999)EEEEEEEGKSSSPK;AQAVS(1)EEEEEEEGKSSSPK 72.317 0.0071298 31246100 3686.1 3852.8 3862.85 4399.22 3523.4 3236.57 3010.54 3275.42 2470.51 1850.75 TRUE FALSE 3372.577839 3601.98202 3600.650505 4738.048687 3383.055517 3419.821796 2809.71237 3246.783348 2727.328355 2080.034882 1.621404462 1.731693084 1.731052943 2.277869822 1.626441723 1.644117522 1.350800601 1.560927355 1.311193566 1 11.02239201 -8.013700169 0.597106449 1.02492762 1.82414948 0.628061993 0.193057149 0.519657225 0.416011608 0.201050109 0.103449895 9.69E-09 8.013700169 0.79922186 AQAVS(ph)EEEEEEEGKSSSPK ddPTM_A459_MK2206_30min_R2 2 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVS(1)EEEEEEEGKSSSPK;AQAVS(1)EEEEEEEGKSSSPK 95.122 0.00096508 34040500 25101.4 36949 32672 33357 37093 24476.1 36333 27372.4 30911 28893.5 TRUE FALSE 27023.18248 35114.16639 33761.26817 30631.6264 35636.54244 25407.55514 31562.43346 30950.06666 33599.58291 27950.70746 0.966815689 1.256289002 1.207885998 1.09591596 1.274978191 0.909012953 1.129217695 1.107308883 1.20210134 1 14.77059718 -6.730182712 24.99999896 1.079965057 1.164763526 0.14279558 0.109552273 431.3541703 345008.4253 0.035196471 0.035193113 1.86E-07 6.730182712 0.084798469 AQAVSEDAGGNEGR ddPTM_A459_MK2206_30min_R2 1 AQAVSEDAGGNEGR 14 0 P55884;P55884-2;C9JZG1 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B 0 115.12 0.039386 3041700 8720 11181 12828 10374 14682 12326 13348 10426 11824 10390 FALSE TRUE 9387.609905 10625.7678 13255.67912 9526.411015 14105.51091 12795.07457 11595.39157 11788.714 12852.43015 10050.97515 0.933999912 1.057187749 1.318845079 0.947809628 1.403397252 1.273018227 1.153658366 1.172892562 1.278724696 1 13.29504786 -5.01715228 4.704193068 1.200009568 0.954267965 0.284134608 0.13201543 0.204378857 12.18226695 0.032159376 0.112245436 9.61E-06 5.01715228 -0.245741604 AQAVSEEEEEEEGKSS(ph)SPK ddPTM_A459_MK2206_30min_R2 2 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVS(0.001)EEEEEEEGKS(0.1)S(0.45)S(0.45)PK;AQAVS(0.096)EEEEEEEGKS(0.177)S(0.403)S(0.323)PK 69.975 0.0091933 150968000 167333 139160 168101 119509 115374 58556 210910 133404 94512 151589 TRUE FALSE 180144.1431 132249.5168 173705.4034 109744.7324 110843.8371 60784.38961 183217.2637 150840.3608 102732.4829 146642.6633 1.228456569 0.901848846 1.184548886 0.748382019 0.755877141 0.414506858 1.249413094 1.02862535 0.700563401 1 17.16194537 -5.762728215 24.9999918 0.839188579 1.084641186 0.219797241 0.225580682 58.31613124 1131218.761 0.065049474 0.102796064 1.73E-06 5.762728215 0.245452607 AQAVSEEEEEEEGKSSS(ph)PK ddPTM_A459_MK2206_30min_R1 4 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVSEEEEEEEGKS(0.039)S(0.17)S(0.791)PK;AQAVS(0.004)EEEEEEEGKS(0.045)S(0.284)S(0.668)PK;AQAVSEEEEEEEGKS(0.065)S(0.406)S(0.528)PK;AQAVSEEEEEEEGKS(0.027)S(0.165)S(0.808)PK 91.518 0.0013497 186094100 12420.4 19379.9 17311.8 17082.7 7587.4 7090.98 7234.62 9443.4 12947 9148 TRUE FALSE 11363.97976 18118.26499 16136.72325 18398.41251 7285.177791 7492.46516 6752.0117 9360.837349 14292.88698 10281.3233 1.10530322 1.762250291 1.569518123 1.789498489 0.708583669 0.728745215 0.656725939 0.91047009 1.390179703 1 13.32773834 -6.264023164 24.99982278 0.874002742 1.572248494 0.602769832 0.260894615 154.385671 1493781.249 0.08124689 0.096438386 5.44E-07 6.264023164 0.698245752 AQAVSEEEEEEEGKSSS(ph)PK ddPTM_A459_MK2206_30min_R2 1 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVSEEEEEEEGKS(0.067)S(0.384)S(0.548)PK 69.188 0.0098872 33583000 39776 43429 43466 39032 29557 18558 44507 36504 28542 46727 TRUE FALSE 42821.28114 41272.37901 44915.13475 35842.96074 28396.44367 19264.23769 38663.17744 41275.19814 31024.53157 45202.30182 0.947325234 0.913059233 0.99364707 0.792945476 0.628207913 0.426178246 0.855336474 0.9131216 0.686348489 1 15.46410862 -5.892915271 4.948971866 0.734105665 0.946099136 0.25377587 0.151512112 0.289648996 11.44641017 0.045422912 0.068809154 1.28E-06 5.892915271 0.211993471 AQEEAERLEADR ddPTM_A459_MK2206_30min_R1 1 AQEEAERLEADR 12 1 P15311;E7EQR4 P15311 EZR Ezrin 0 137.4 0.0037408 6410700 2353.9 2525 2946.2 2656.5 3001.2 2689.5 2545.2 2997.8 1620.4 921.8 FALSE TRUE 2153.688444 2360.622041 2746.220153 2861.10409 2881.655849 2841.777166 2375.414352 2971.590551 1788.846379 1035.999543 2.078850766 2.278593708 2.650792822 2.761684702 2.781522316 2.743029362 2.292872007 2.868331912 1.726686455 1 10.01680765 -8.501176654 3.727634602 1.004097992 2.559277562 0.802676839 0.249396807 0.083005856 2.89589031 0.2525756 0.066464653 3.15E-09 8.501176654 1.55517957 AQEEAERLEADR ddPTM_A459_MK2206_30min_R2 1 AQEEAERLEADR 12 1 P15311;E7EQR4 P15311 EZR Ezrin 0 157.03 0.0012423 19753000 27058 82478 65917 70277 83983 92044 72798 46677 82089 50797 FALSE TRUE 29129.58128 78382.26245 68114.63988 64535.1443 80685.40544 95546.79892 63239.53515 52777.84417 89228.95284 49139.49805 0.592793627 1.595096929 1.386148467 1.313304915 1.641966415 1.944399164 1.286938973 1.074041174 1.815829554 1 15.5845955 -4.756127304 24.98720674 1.463124267 0.592792253 0.443225084 0.288220426 156.2263532 734785.4044 0.070944558 0.589610127 1.75E-05 4.756127304 -0.870332014 AQENYEGSEEVS(ph)PPQTK ddPTM_A459_MK2206_30min_R1 3 AQENYEGSEEVSPPQTK 17 0 Q93008;Q93008-3 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X 1 AQENYEGSEEVS(1)PPQTK;AQENYEGSEEVS(1)PPQTK;AQENYEGSEEVS(1)PPQTK 234.12 1.01E-39 18722300 3317.79 3357.6 3265.53 2735.75 3174.07 3138.78 3217.85 3081.36 3017.33 3112.7 TRUE FALSE 3035.594538 3139.01963 3043.874922 2946.457939 3047.640071 3316.495011 3003.193098 3054.419994 3330.992251 3498.324776 0.867728051 0.897292227 0.870095007 0.842248255 0.871171279 0.948023761 0.858466063 0.873109328 0.952167813 1 11.77244852 -8.444218346 3.054926965 0.999095251 0.879003049 0.690995851 0.026974065 0.134831749 2.541011443 0.02684471 0.007186793 3.60E-09 8.444218346 -0.120092202 AQENYEGSEEVS(ph)PPQTK ddPTM_A459_MK2206_30min_R2 3 AQENYEGSEEVSPPQTK 17 0 Q93008;Q93008-3 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X 1 AQENY(0.003)EGS(0.099)EEVS(0.891)PPQT(0.007)K;AQENYEGS(0.001)EEVS(0.999)PPQTK;AQENYEGSEEVS(1)PPQTK 236.68 2.19E-22 32551500 83432 102175 93207 117631 121404 116071 118052 93472 102424 102657 TRUE FALSE 89819.61807 97101.13808 96314.47486 108020.171 116637.069 120488.1632 102551.6306 105689.1113 111332.6544 99307.3105 0.904461289 0.977784391 0.969862887 1.087736346 1.174506372 1.213285937 1.032669499 1.064263153 1.121092232 1 16.59961231 -5.75051195 3.543780876 1.108552285 0.948073601 0.551491489 0.061473235 0.174525547 4.630649232 0.018331588 0.031507534 1.78E-06 5.75051195 -0.160478684 AQESGQGSTAGPLRPPPPGAGGPAT(ph)PSK ddPTM_A459_MK2206_30min_R1 1 AQESGQGSTAGPLRPPPPGAGGPATPSK 28 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AQESGQGS(0.001)T(0.001)AGPLRPPPPGAGGPAT(0.888)PS(0.11)K 49.208 0.045028 13495000 1732.5 1960.7 1927.1 1553.6 1416 1276.6 1360.1 1821.7 1733.5 1477.8 TRUE FALSE 1585.141777 1833.058074 1796.293821 1673.258541 1359.597722 1348.879989 1269.370211 1805.773069 1913.703528 1660.881021 0.954398152 1.103666097 1.081530705 1.007452382 0.818600312 0.812147271 0.764275222 1.087238066 1.152221926 1 10.69773301 -6.011889925 22.46433103 0.926961879 1.050952911 0.136477969 0.120910375 287.0758323 542397.1693 0.038675271 0.052929591 9.73E-07 6.011889925 0.123991033 AQFEGIVTDLIR ddPTM_A459_MK2206_30min_R1 1 AQFEGIVTDLIR 12 0 P38646;H0YBG6 P38646 HSPA9 "Stress-70 protein, mitochondrial" 0 129.74 0.031387 6223300 1727.7 1869.8 1409.3 1606.9 1535.4 1531.8 1781.7 1647.2 1662.7 1690.2 FALSE TRUE 1580.750042 1748.07568 1313.640643 1730.663716 1474.241767 1618.529192 1662.846044 1632.798704 1835.543615 1899.594736 0.832151202 0.920236115 0.691537314 0.911069968 0.776082255 0.852039207 0.875368842 0.859551078 0.966281692 1 10.89147595 -8.255544932 1.193344125 1.004274959 0.830920459 0.465527951 0.062428313 0.386891769 1.096488938 0.055455139 0.018033565 5.55E-09 8.255544932 -0.1733545 AQFSVAGVHTVPGS(ph)PQAR ddPTM_A459_MK2206_30min_R1 1 AQFSVAGVHTVPGSPQAR 18 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 AQFSVAGVHT(0.001)VPGS(0.999)PQAR 158.5 4.02E-05 0 1440.4 1371.4 1444.9 1302.2 1851.2 1608.5 1702 1520.7 1427.3 1462.3 TRUE FALSE 1317.886416 1282.121611 1346.824214 1402.49567 1777.462784 1699.57188 1588.462685 1507.40468 1575.672943 1643.460764 0.801897097 0.780135212 0.819504939 0.853379466 1.081536489 1.034142048 0.966535205 0.917213671 0.958753003 1 10.6825213 -6.075180161 5.170260357 0.989298991 0.80346738 0.812206403 0.042730396 0.103790661 5.013049301 0.014516104 0.019206102 8.41E-07 6.075180161 -0.18583161 AQFSVAGVHTVPGS(ph)PQAR ddPTM_A459_MK2206_30min_R2 4 AQFSVAGVHTVPGSPQAR 18 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 AQFSVAGVHT(0.002)VPGS(0.998)PQAR;AQFSVAGVHT(0.002)VPGS(0.998)PQAR;AQFSVAGVHTVPGS(1)PQAR;AQFSVAGVHTVPGS(1)PQAR 130.3 0.00038913 85518600 142704 281166 215346 279321 202682 235917 215723 178178 240220 160634 TRUE FALSE 153629.528 267203.7053 222525.5282 256499.5808 194723.6863 244894.9867 187398.311 201466.4764 261113.9014 155392.5257 0.988654552 1.719540268 1.432022082 1.650655844 1.253108445 1.575976615 1.20596734 1.29650043 1.680350455 1 17.24555759 -7.264337578 24.99474889 1.320412933 1.45069091 0.065686054 0.250343064 834.4605806 7196528.135 0.096557622 0.06833797 5.44E-08 7.264337578 0.130277977 AQGAGVTLPPT(ph)PSGSR ddPTM_A459_MK2206_30min_R1 2 AQGAGVTLPPTPSGSR 16 0 Q6P996-4;H3BND4;Q6P996-3;Q6P996-5;Q6P996 Q6P996-4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 AQGAGVT(0.008)LPPT(0.976)PS(0.016)GSR;AQGAGVTLPPT(0.839)PS(0.125)GS(0.036)R 131.18 0.0016934 13748000 7131.2 7526.6 8265.4 6754.5 7345.8 6098.8 7049.3 7596.2 6388.9 5742.8 TRUE FALSE 6524.653993 7036.616972 7704.367677 7274.73276 7053.201231 6444.108786 6579.054059 7529.787224 7053.049018 6454.26142 1.010906371 1.09022807 1.193686957 1.127120872 1.092797575 0.998426987 1.019334922 1.166638091 1.092773992 1 12.6560363 -6.532661141 24.90245825 1.061595529 1.110603776 0.122867117 0.062535303 483.5604453 1230959.688 0.022115304 0.022140935 2.93E-07 6.532661141 0.049008247 AQGAGVTLPPT(ph)PSGSR ddPTM_A459_MK2206_30min_R2 5 AQGAGVTLPPTPSGSR 16 0 Q6P996-4;H3BND4;Q6P996-3;Q6P996-5;Q6P996 Q6P996-4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 AQGAGVT(0.001)LPPT(0.857)PS(0.14)GS(0.002)R;AQGAGVTLPPT(0.848)PS(0.138)GS(0.014)R;AQGAGVT(0.006)LPPT(0.824)PS(0.152)GS(0.018)R;AQGAGVT(0.001)LPPT(0.97)PS(0.026)GS(0.003)R;AQGAGVTLPPT(0.867)PS(0.123)GS(0.01)R 128.45 0.0022283 14544100 168467 192935 202221 209120 213348 185027 206953 152171 193515 172546 TRUE FALSE 181364.963 183354.1285 208962.9472 192034.2271 204970.8855 192068.3321 179779.8225 172060.2722 210346.5849 166915.8382 1.086565332 1.098482508 1.251906048 1.150485353 1.227989433 1.150689679 1.077068686 1.030820527 1.260195481 1 17.34876133 -7.153767937 5.358519586 1.09494077 1.165876717 0.153089949 0.079465716 0.454588059 18.84942049 0.030498533 0.023471234 7.02E-08 7.153767937 0.070935947 AQGEPVAGHES(ph)PK ddPTM_A459_MK2206_30min_R1 5 AQGEPVAGHESPK 13 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0YAB3 D6REX3 SEC31A Protein transport protein Sec31A 1 AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK 168.05 0.00029015 66804500 15176 17937.1 17486 12858.2 9843.1 9979.61 13286 11775.2 20057.4 25857.5 TRUE FALSE 13885.20151 16769.39153 16299.09904 13848.54079 9451.028484 10544.64689 12399.71518 11672.25067 22142.43851 29060.92231 0.477796312 0.577042647 0.560859661 0.4765348 0.325214334 0.362846257 0.426680029 0.401647633 0.761931719 1 14.82679287 -8.473988183 3.152993965 0.99728917 0.452170971 0.847085846 0.076225238 0.092069771 1.998949543 0.085436087 0.022761111 3.36E-09 8.473988183 -0.545118198 down AQGEPVAGHES(ph)PK ddPTM_A459_MK2206_30min_R2 4 AQGEPVAGHESPK 13 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0YAB3 D6REX3 SEC31A Protein transport protein Sec31A 1 AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK 147.64 0.0005679 80880000 174017 111103 131390 105906 85815 62434.8 130283 99609 67777 141931 TRUE FALSE 187339.8753 105585.7866 135770.477 97253.14102 82445.47191 64810.80006 113176.6856 112628.2383 73672.12095 137299.8031 1.364458441 0.7690163 0.988861411 0.708326879 0.600477714 0.472038551 0.824303335 0.820308812 0.536578489 1 17.06697003 -1.926105911 0.961968026 0.70590635 200 0.545281084 0.168000649 407.1250312 1.623325526 0.053887482 177332.0978 0.011854796 1.926105911 199.2940936 AQGEPVAGHES(ph)PKIPYEK ddPTM_A459_MK2206_30min_R1 3 AQGEPVAGHESPKIPYEK 18 1 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0YAB3 D6REX3 SEC31A Protein transport protein Sec31A 1 AQGEPVAGHES(0.964)PKIPY(0.036)EK;AQGEPVAGHES(0.991)PKIPY(0.009)EK;AQGEPVAGHES(0.878)PKIPY(0.122)EK 80.752 0.0047104 493853000 16909 19645 20555 17538.5 15611.4 12756.1 14104.4 16041.1 15611.5 14168.9 TRUE FALSE 15470.80076 18366.10693 19159.78387 18889.31831 14989.56488 13478.33936 13163.52121 15900.85435 17234.37129 15924.2503 0.971524591 1.153342015 1.203182788 1.186198279 0.941304275 0.846403385 0.826633654 0.998530798 1.082272067 1 13.95893783 -6.271660674 23.79634902 0.937849996 1.135661986 0.47725205 0.091385259 315.0891883 733562.0243 0.030400581 0.0348965 5.35E-07 6.271660674 0.19781199 AQGEPVAGHES(ph)PKIPYEK ddPTM_A459_MK2206_30min_R2 4 AQGEPVAGHESPKIPYEK 18 1 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0YAB3 D6REX3 SEC31A Protein transport protein Sec31A 1 AQGEPVAGHES(0.995)PKIPY(0.005)EK;AQGEPVAGHES(0.979)PKIPY(0.021)EK;AQGEPVAGHES(0.997)PKIPY(0.003)EK;AQGEPVAGHES(1)PKIPYEK 98.408 0.0014041 611310000 1125081 1471200 1397915 1370812 1273979 1009237 1545246 1107215 1011027 1371550 TRUE FALSE 1211218.066 1398142.347 1444520.788 1258812.275 1223956.183 1047644.221 1342353.344 1251931.802 1098964.301 1326796.436 0.912889147 1.053773065 1.08872827 0.948760669 0.922489803 0.789604338 1.011725166 0.943574891 0.828284032 1 20.33951561 -5.957047015 6.932822409 0.913625449 1.02217361 0.264820791 0.076230307 0.258119022 31.78745622 0.021587797 0.032006921 1.10E-06 5.957047015 0.108548161 AQGGQTQS(ph)PTK ddPTM_A459_MK2206_30min_R2 3 AQGGQTQSPTK 11 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 AQGGQT(0.002)QS(0.998)PT(0.001)K;AQGGQT(0.001)QS(0.981)PT(0.018)K;AQGGQT(0.009)QS(0.89)PT(0.101)K 194.86 2.05E-05 8484800 24350.6 13734.6 13741 11102.6 16566 16141.3 17290.1 135275 38240 18863.1 TRUE FALSE 26214.90066 13052.55974 14199.11808 10195.48206 15915.5356 16755.56848 15019.8891 152955.907 41566.04608 18247.59859 1.436621949 0.715302875 0.778136258 0.558730071 0.87219891 0.918234166 0.823115931 8.382248557 2.2778913 1 14.155419 -7.624381653 23.44411647 4.318925573 0.850901919 0.36555289 1.79305782 6.527234806 1495.761919 0.771944355 0.44568173 2.37E-08 7.624381653 -3.468023655 AQGGQTQSPT(ph)K ddPTM_A459_MK2206_30min_R2 1 AQGGQTQSPTK 11 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 AQGGQT(0.035)QS(0.113)PT(0.852)K 110.15 0.021017 4227100 4308.4 1230.6 5166.9 2309.4 4687.4 2955.5 4494.8 29959 9419.3 4800.7 TRUE FALSE 4638.254417 1169.490193 5339.161867 2120.714633 4503.349124 3067.973624 3904.627361 33874.74416 10238.57369 4644.053552 0.998751277 0.251825303 1.149677067 0.456651632 0.969702238 0.660624084 0.840780003 7.294219109 2.20466314 1 12.18116889 -7.582139494 24.99995528 3.863182402 0.741272773 0.396958917 1.527509543 61.70263774 26029.20702 0.65717687 0.379421253 2.62E-08 7.582139494 -3.121909629 AQGLSSEASVES(ph)NEDSDHACK ddPTM_A459_MK2206_30min_R2 2 AQGLSSEASVESNEDSDHACK 21 0 K7ERF3;K7ELU8;D3DUE4;F6WF08;Q6ZW76-2;Q6ZW76 K7ERF3 ANKS3 Ankyrin repeat and SAM domain-containing protein 3 1 AQGLSSEASVES(0.999)NEDS(0.001)DHACK;AQGLSSEASVES(1)NEDSDHACK 165.42 2.75E-10 4597900 24337.9 34361 28084 34510 36069 30419 37445 27726 33236 29843 TRUE FALSE 26201.22834 32654.68271 29020.30654 31690.42261 34652.74983 31576.61636 32528.42652 31349.8834 36126.8072 28869.22535 0.907583353 1.131124313 1.005233296 1.097723344 1.200335284 1.093781214 1.12675093 1.08592742 1.251395102 1 14.81724478 -3.846905338 1.020706437 1.121444931 4.05E-33 0.372973585 0.07508636 11.23480986 2.265233506 0.022678981 21.62720545 0.000142264 3.846905338 -1.121444931 AQGQES(ph)DSSETSVR ddPTM_A459_MK2206_30min_R2 1 AQGQESDSSETSVR 14 0 Q03164-2;Q03164;Q03164-3;A0A3B3ITZ1;E9PR05;H7C5W4 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 AQGQES(0.946)DS(0.041)S(0.012)ETSVR 151.38 0.00012318 0 4927 6410.2 3079.9 6472.3 5944.3 5500.2 7637.2 6930.4 5292.9 4126.4 TRUE FALSE 5304.214908 6091.878789 3182.582329 5943.492386 5710.896914 5709.513965 6634.426466 7836.227076 5753.266875 3991.755906 1.328792399 1.526115056 0.797288813 1.488941841 1.430672879 1.430326428 1.662032104 1.96310277 1.441287246 1 11.96280779 -6.448989543 1.596513154 1.575830929 1.259052415 0.095776183 0.291695632 0.679365498 3.490282917 0.111906217 0.130374956 3.56E-07 6.448989543 -0.316778514 AQGVRS(ph)PLLR ddPTM_A459_MK2206_30min_R2 1 AQGVRSPLLR 10 1 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 AQGVRS(1)PLLR 71.268 0.039372 36221000 36667 99720 76485 95314 96032 106350 103370 73053 111820 83701 TRUE FALSE 39474.25371 94768.04981 79034.97173 87526.54131 92261.30116 110397.2238 89797.39483 82601.27793 121545.9015 80969.84322 0.487517971 1.170411675 0.976103801 1.080977038 1.139452634 1.363436304 1.109022708 1.020148671 1.501125563 1 16.30509706 -4.760318674 24.97655152 1.149099299 0.487517175 0.617579059 0.156666279 18.23081096 406117.599 0.038103309 0.227594343 1.74E-05 4.760318674 -0.661582124 AQIHDLVLVGGSTR ddPTM_A459_MK2206_30min_R1 1 AQIHDLVLVGGSTR 14 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 101.2 0.011879 16654000 3825.3 3456.5 3356.1 3501.5 4012.3 3344.8 3585.1 3635.6 3051.8 2742.6 FALSE TRUE 3499.938148 3231.481222 3128.297283 3771.186137 3852.481595 3534.179685 3345.94452 3603.814332 3369.045531 3082.373994 1.135468361 1.048374152 1.014898675 1.223468062 1.249842363 1.146577181 1.085508938 1.16916842 1.09300349 1 11.5898262 -5.750343475 24.99977011 1.1480751 1.064459784 0.160964273 0.072882633 348.746081 785739.2616 0.020051877 0.03432195 1.78E-06 5.750343475 -0.083615316 AQIHDLVLVGGSTR ddPTM_A459_MK2206_30min_R2 2 AQIHDLVLVGGSTR 14 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 164.88 0.00036139 13893900 63673 84197 66979 72974 77865 83743 84829 53750 72291 68959 FALSE TRUE 68547.85384 80015.89941 69212.04643 67011.79077 74807.62886 86929.89855 73690.8504 60775.30955 78578.74051 66708.87348 1.027567252 1.199479098 1.037523838 1.004540885 1.121404469 1.303123468 1.104663391 0.911052854 1.177935354 1 16.02559106 -10.77199104 6.403059749 0.99999847 1.098342936 0.072648881 0.105666875 2.37E-06 2.78E-07 0.105129373 0.025497222 1.69E-11 10.77199104 0.098344466 AQIS(ph)SPNLR ddPTM_A459_MK2206_30min_R2 3 AQISSPNLR 9 0 H0Y507;Q5TCZ1-2;Q5TCZ1-3;Q5TCZ1 H0Y507 SH3PXD2A SH3 and PX domain-containing protein 2A 1 AQIS(0.5)S(0.5)PNLR;AQIS(0.5)S(0.5)PNLR;AQIS(0.5)S(0.5)PNLR 125.68 0.0049856 16537700 194657 255566 225861 322008 215482 304785 261214 202221 239737 205853 TRUE FALSE 209560.0896 242874.9641 233391.093 295698.9163 207021.094 316383.8067 226916.288 228651.979 260588.8909 199136.0335 1.052346408 1.219643476 1.172018388 1.484909141 1.039596352 1.588782307 1.139503906 1.148220013 1.308597376 1 17.60339477 -10.7722663 4.088619947 0.999793985 1.242750756 0.152691433 0.168929811 115529901.4 80.58421596 225256.1338 0.038759929 1.69E-11 10.7722663 0.24295677 AQISS(ph)PNLR ddPTM_A459_MK2206_30min_R2 1 AQISSPNLR 9 0 H0Y507;Q5TCZ1-2;Q5TCZ1-3;Q5TCZ1 H0Y507 SH3PXD2A SH3 and PX domain-containing protein 2A 1 AQIS(0.314)S(0.686)PNLR 102.95 0.01233 0 123960 170860 147480 164450 125070 161040 144630 131840 149330 115810 TRUE FALSE 133450.4729 162375.3409 152396.9096 151013.909 120159.1234 167168.49 125639.9073 149071.9407 162318.4535 112031.1292 1.191191001 1.44937699 1.36030861 1.347963821 1.072551212 1.492161074 1.121473185 1.330629636 1.448869209 1 16.77354013 -11.10758102 3.165038745 0.984898759 1.312295257 0.325644253 0.135005833 49607698.32 54864603.96 6258243.574 0.032176624 7.81E-12 11.10758102 0.327396498 AQKLPDLS(ph)PVENK ddPTM_A459_MK2206_30min_R1 2 AQKLPDLSPVENK 13 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 AQKLPDLS(1)PVENK;AQKLPDLS(1)PVENK 76.526 0.024719 55845000 21206 24226 23520 23349 19682.1 17774.6 17445 20808 15193.2 8753.7 TRUE FALSE 19402.31834 22648.883 21923.52793 25147.34403 18898.12028 18780.98249 16281.27588 20626.07785 16772.58751 9838.174443 1.9721462 2.302142855 2.22841423 2.556098611 1.920897051 1.908990596 1.654908233 2.096535081 1.704847541 1 13.26417492 -9.555749016 0.255474515 0.591533486 2.337364406 0.73327154 0.20919033 3.750075913 0.387518288 1.814891374 0.400870281 2.78E-10 9.555749016 1.745830921 AQKLPDLS(ph)PVENK ddPTM_A459_MK2206_30min_R2 2 AQKLPDLSPVENK 13 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 AQKLPDLS(1)PVENK;AQKLPDLS(1)PVENK 102.57 0.0050547 24114000 139899 257350 206258 229150 273950 196841 270520 167956 240293 181871 TRUE FALSE 150609.775 244570.3732 213134.5388 210427.712 263193.3465 204331.9222 235000.399 189908.4259 261193.2508 175936.5642 0.856045903 1.39010543 1.211428334 1.196043091 1.49595593 1.161395433 1.335710972 1.079414201 1.484587653 1 17.42469582 -4.750692399 24.97803434 1.266995968 0.856045024 0.375874964 0.156650525 457.4649119 1063165.497 0.035501828 0.508449083 1.78E-05 4.750692399 -0.410950945 AQLDYVDLYLIHSPMS(ph)LKPGEELSPTDENGK ddPTM_A459_MK2206_30min_R1 2 AQLDYVDLYLIHSPMSLKPGEELSPTDENGK 31 1 A0A0A0MSS8;P42330;S4R3Z2;S4R3D5 A0A0A0MSS8 AKR1C3 Aldo-keto reductase family 1 member C3 1 AQLDYVDLY(0.001)LIHS(0.164)PMS(0.79)LKPGEELS(0.025)PT(0.02)DENGK;AQLDYVDLYLIHS(0.169)PMS(0.743)LKPGEELS(0.031)PT(0.057)DENGK 98.151 1.64E-08 247160000 4243.8 4318.5 5036.1 3437.3 3615 3452.1 4726.5 3810.9 5549.3 5867.1 TRUE FALSE 3882.842525 4037.364865 4694.263563 3702.041442 3471.006895 3647.554919 4411.203809 3777.581703 6126.169593 6593.960642 0.588848302 0.612282221 0.711903485 0.561429108 0.526391813 0.553166013 0.668976363 0.572885085 0.929057652 1 12.68692956 -8.32419927 4.236728281 0.991494339 0.600121127 0.881811554 0.053603529 0.071990021 2.478055763 0.053263584 0.014362942 4.74E-09 8.32419927 -0.391373212 AQLDYVDLYLIHSPMSLKPGEELS(ph)PTDENGK ddPTM_A459_MK2206_30min_R1 1 AQLDYVDLYLIHSPMSLKPGEELSPTDENGK 31 1 A0A0A0MSS8;P42330;S4R3Z2;S4R3D5 A0A0A0MSS8 AKR1C3 Aldo-keto reductase family 1 member C3 1 AQLDYVDLYLIHS(0.009)PMS(0.046)LKPGEELS(0.935)PT(0.01)DENGK 99.536 1.79E-08 15301000 1799.4 2147.2 2270.5 1673.1 1736.4 1331.9 2209.7 1779.7 2329.6 2688.2 TRUE FALSE 1646.351581 2007.41689 2116.384786 1801.962452 1667.235511 1407.311027 2062.294945 1764.140271 2571.770257 3021.234511 0.544926776 0.664435972 0.700503314 0.5964325 0.551839159 0.465806617 0.682600089 0.583913716 0.85123159 1 11.56092246 -8.430000807 2.7190445 0.998961112 0.599653658 0.797249166 0.067788741 0.112562954 1.690933133 0.068408224 0.018559066 3.72E-09 8.430000807 -0.399307454 AQLEPVAS(ph)PAK ddPTM_A459_MK2206_30min_R1 5 AQLEPVASPAK 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK 170.95 0.00033382 804346900 33533.8 37922.6 38178.3 30006.4 24037.5 22378.2 30497.8 31364.9 36823.7 37143.5 TRUE FALSE 30681.57422 35453.83185 35586.86337 32317.49813 23080.03547 23645.23435 28463.34741 31090.67999 40651.65539 41745.1172 0.734973963 0.849292905 0.852479661 0.774162352 0.552879882 0.566419163 0.681836567 0.74477405 0.973806235 1 15.34931984 -8.258715394 3.886346125 0.999137675 0.716289603 0.560826417 0.09504008 0.187432341 6.268478467 0.09729542 0.028800372 5.51E-09 8.258715394 -0.282848072 AQLEPVAS(ph)PAK ddPTM_A459_MK2206_30min_R2 6 AQLEPVASPAK 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK 140.31 0.0010969 1306060000 4552180 4138200 4307680 3491450 3757860 2845730 4389630 3155892 3286160 4475890 TRUE FALSE 4900698.401 3932703.006 4451295.901 3206187.366 3610307.535 2954026.249 3813266.308 3568377.92 3571984.257 4329842.076 1.131842297 0.908278625 1.028050405 0.740485983 0.83381968 0.682248035 0.880694086 0.824135813 0.824968716 1 22.04588298 -5.750694603 24.9937338 0.815831439 1.011279327 0.476065093 0.093567403 175.1728149 407470.7265 0.024030298 0.041089873 1.78E-06 5.750694603 0.195447887 AQLGINEDHS(ph)EGDEK ddPTM_A459_MK2206_30min_R1 1 AQLGINEDHSEGDEK 15 0 F8WAN1;Q69YQ0-2;Q69YQ0;A0A494C1J1;C9J8U1;C9JLY8 F8WAN1 SPECC1L-ADORA2A;SPECC1L Cytospin-A 1 AQLGINEDHS(1)EGDEK 117.53 0.0021303 3066400 1378.2 1694.3 1460.5 935.67 1105.8 959.43 1505.8 1153.7 1709.1 2086.1 TRUE FALSE 1260.976853 1584.000762 1361.365329 1007.735466 1061.753644 1013.752097 1405.350829 1143.613323 1886.767061 2344.541817 0.537835087 0.675612075 0.580653038 0.42982192 0.452861893 0.432388149 0.599413847 0.487776893 0.804748735 1 11.1950903 -8.458938764 2.949897825 0.998187935 0.52483461 0.810214064 0.075854187 0.104616927 1.923734328 0.080055419 0.021474921 3.48E-09 8.458938764 -0.473353325 AQLGINEDHS(ph)EGDEK ddPTM_A459_MK2206_30min_R2 4 AQLGINEDHSEGDEK 15 0 F8WAN1;Q69YQ0-2;Q69YQ0;A0A494C1J1;C9J8U1;C9JLY8 F8WAN1 SPECC1L-ADORA2A;SPECC1L Cytospin-A 1 AQLGINEDHS(1)EGDEK;AQLGINEDHS(1)EGDEK;AQLGINEDHS(1)EGDEK;AQLGINEDHS(1)EGDEK 153.17 0.00014082 42723500 226920 150991 183430 170022 170335 130545 193057 155401 134788 208118 TRUE FALSE 244293.1697 143493.0065 189545.4646 156130.6587 163646.792 135512.9815 167708.384 175712.4443 146511.6166 201327.1267 1.213414077 0.71273558 0.941480007 0.775507311 0.81284025 0.673098472 0.833014342 0.872770834 0.727729139 1 17.61918205 -4.752765163 24.99969831 0.811132468 1.213414837 0.60103965 0.096903611 214.455585 618029.7927 0.02252727 0.259397903 1.77E-05 4.752765163 0.402282369 AQLGINEDHS(ph)EGDEKSEK ddPTM_A459_MK2206_30min_R1 1 AQLGINEDHSEGDEKSEK 18 1 F8WAN1;Q69YQ0-2;Q69YQ0;A0A494C1J1;C9J8U1;C9JLY8 F8WAN1 SPECC1L-ADORA2A;SPECC1L Cytospin-A 1 AQLGINEDHS(0.959)EGDEKS(0.041)EK 90.397 0.0031688 8141800 2068 2288.2 2283.9 1971 1446.5 1568.8 1721.9 1758.5 1909.1 1795.3 TRUE FALSE 1892.10574 2139.237764 2128.875231 2122.806762 1388.882842 1657.6241 1607.035193 1743.12562 2107.557777 2017.715318 0.93774663 1.060227746 1.055091971 1.052084376 0.688344302 0.821535172 0.796462801 0.863910585 1.044526826 1 10.97850692 -6.218907672 24.9816488 0.856312301 1.030769483 0.368628767 0.099850003 486.3344108 285655.7948 0.029849389 0.038535132 6.04E-07 6.218907672 0.174457182 AQLS(ph)PGIYDDTSAR ddPTM_A459_MK2206_30min_R1 4 AQLSPGIYDDTSAR 14 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 AQLS(0.812)PGIYDDT(0.094)S(0.094)AR;AQLS(1)PGIYDDTSAR;AQLS(1)PGIYDDTSAR;AQLS(1)PGIYDDTSAR 241.66 1.19E-19 151737600 16419 14854.5 15318.3 12681.9 15989.6 13839 16098.1 13497 13178.1 12778.3 TRUE FALSE 15022.47783 13887.46935 14278.53648 13658.66214 15352.70037 14622.55222 15024.22512 13378.99715 14548.01065 14361.37228 1.046033592 0.967001557 0.994232041 0.951069429 1.069027394 1.018186281 1.046155258 0.931596013 1.01299586 1 13.80990599 -4.730447676 24.03612695 0.999408064 1.046034071 0.113537708 0.039473818 6010.977615 4661493.451 0.009913202 1.226016047 1.86E-05 4.730447676 0.046626007 AQLS(ph)PGIYDDTSAR ddPTM_A459_MK2206_30min_R2 3 AQLSPGIYDDTSAR 14 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 AQLS(0.999)PGIY(0.001)DDTSAR;AQLS(0.432)PGIY(0.358)DDT(0.208)S(0.002)AR;AQLS(1)PGIYDDTSAR 222.09 5.44E-09 136863000 207051 240749 203651 234403 199220 212591 208578 181369 205803 208471 TRUE FALSE 222902.9838 228793.7547 210440.6227 215251.5251 191397.6218 220681.2995 181191.4581 205074.551 223703.3729 201668.6083 1.10529341 1.134503563 1.043497173 1.067352658 0.949069979 1.0942769 0.898461389 1.016888809 1.109262243 1 17.62162701 -5.540930488 1.556798104 1.011869612 1.12330798 0.298963602 0.060434359 0.519371711 2.399821797 0.018434221 0.056044359 2.88E-06 5.540930488 0.111438368 AQLSVQTS(ph)PVPTPDPK ddPTM_A459_MK2206_30min_R1 2 AQLSVQTSPVPTPDPK 16 0 J3KQV8;O43426;A0A0D9SGJ6 J3KQV8 SYNJ1 Synaptojanin-1 1 AQLSVQT(0.028)S(0.971)PVPT(0.001)PDPK;AQLS(0.008)VQT(0.088)S(0.902)PVPT(0.003)PDPK 179.97 2.51E-09 3994400 4106.5 4341.9 4472.6 3245.9 3806.5 3375.3 3911.2 3903.6 3594.7 3377.2 TRUE FALSE 3757.220611 4059.241521 4169.012373 3495.89978 3654.879045 3566.406569 3650.290984 3869.471237 3968.381929 3795.593033 0.98989027 1.069461738 1.098382344 0.921041785 0.962927009 0.939617746 0.961718222 1.019464206 1.045523557 1 11.8901096 -5.756365954 24.99960467 0.976441865 1.054266473 0.384501258 0.042806808 134.4210906 662357.5752 0.012498156 0.020831266 1.75E-06 5.756365954 0.077824608 AQLSVQTS(ph)PVPTPDPK ddPTM_A459_MK2206_30min_R2 2 AQLSVQTSPVPTPDPK 16 0 J3KQV8;O43426;A0A0D9SGJ6 J3KQV8 SYNJ1 Synaptojanin-1 1 AQLSVQT(0.422)S(0.578)PVPTPDPK;AQLSVQT(0.083)S(0.912)PVPT(0.005)PDPK 173.77 1.09E-08 3731700 42630 52860 48644 57805 56802 42454 49282 46924 42959 52538 TRUE FALSE 45893.78558 50235.04927 50265.76668 53082.14659 54571.66807 44069.61672 42811.2142 53057.12791 46695.49617 50823.68936 0.902999884 0.988417998 0.989022389 1.044437097 1.073744719 0.867107785 0.842347628 1.043944833 0.918774232 1 15.63321349 -6.765676099 24.99999546 0.931426007 1.00098576 0.185109932 0.068321992 193.7726114 1143402.52 0.024725655 0.022560618 1.72E-07 6.765676099 0.069559753 AQLYLPS(ph)TSPPHEGLDGFAQELSR ddPTM_A459_MK2206_30min_R1 2 AQLYLPSTSPPHEGLDGFAQELSR 24 0 I3L465;I3L1Z8;I3L1A6;Q8N137-4;Q8N137-5;Q8N137;Q8N137-3;Q8N137-2 I3L465 CNTROB Centrobin 1 AQLY(0.03)LPS(0.392)T(0.265)S(0.313)PPHEGLDGFAQELSR;AQLY(0.002)LPS(0.432)T(0.283)S(0.283)PPHEGLDGFAQELSR 84.948 7.39E-05 25469800 5068.51 4215.02 4363.63 4009.52 5761.04 5350.6 5540.61 5398.6 4434.86 4578.1 TRUE FALSE 4637.406609 3940.621432 4067.438953 4318.333925 5531.565578 5653.546348 5171.006016 5351.400609 4895.879567 5145.269591 0.901295166 0.765872684 0.790520085 0.839282344 1.07507789 1.098785253 1.005001959 1.040062239 0.951530232 1 12.32903096 -6.208601578 6.065311481 1.032681612 0.815752077 0.796696637 0.050467955 0.09340053 7.953184872 0.015296148 0.019696185 6.19E-07 6.208601578 -0.216929534 AQLYLPS(ph)TSPPHEGLDGFAQELSR ddPTM_A459_MK2206_30min_R2 2 AQLYLPSTSPPHEGLDGFAQELSR 24 0 I3L465;I3L1Z8;I3L1A6;Q8N137-4;Q8N137-5;Q8N137;Q8N137-3;Q8N137-2 I3L465 CNTROB Centrobin 1 AQLY(0.024)LPS(0.325)T(0.325)S(0.325)PPHEGLDGFAQELSR;AQLY(0.004)LPS(0.39)T(0.328)S(0.278)PPHEGLDGFAQELSR 67.614 0.0014805 8496800 18062.5 21172 18829.1 23163 23988 29453 25329 20567.6 24476 21245.5 TRUE FALSE 19445.37889 20120.62927 19456.8528 21270.50881 23046.11059 30573.85455 22003.27187 23255.85594 26604.87824 20552.26107 0.946143046 0.97899833 0.946701325 1.034947383 1.121341857 1.487615131 1.07060103 1.13154732 1.294498846 1 14.3270095 -6.243986692 2.940229478 1.204330275 0.965692947 0.404269751 0.125982073 0.259494082 4.532483979 0.039965693 0.050630123 5.70E-07 6.243986692 -0.238637328 AQLYLPSTS(ph)PPHEGLDGFAQELSR ddPTM_A459_MK2206_30min_R1 1 AQLYLPSTSPPHEGLDGFAQELSR 24 0 I3L465;I3L1Z8;I3L1A6;Q8N137-4;Q8N137-5;Q8N137;Q8N137-3;Q8N137-2 I3L465 CNTROB Centrobin 1 AQLYLPS(0.221)T(0.141)S(0.638)PPHEGLDGFAQELSR 119.46 9.92E-08 27595000 6157.1 5447.9 5209.4 4304.7 7043.7 6606.1 6736.2 6191.7 5279.6 5072.9 TRUE FALSE 5633.406313 5093.24072 4855.800442 4636.24874 6763.134514 6980.131673 6286.840389 6137.56662 5828.433313 5701.36915 0.988079558 0.893336422 0.851690237 0.813181644 1.186229892 1.224290427 1.102689586 1.076507495 1.022286605 1 12.4770927 -6.261000406 24.99907263 1.111974978 0.884563586 0.660155499 0.075514032 24.8003141 1412357.126 0.024366079 0.02953457 5.48E-07 6.261000406 -0.227411393 AQLYLPSTS(ph)PPHEGLDGFAQELSR ddPTM_A459_MK2206_30min_R2 1 AQLYLPSTSPPHEGLDGFAQELSR 24 0 I3L465;I3L1Z8;I3L1A6;Q8N137-4;Q8N137-5;Q8N137;Q8N137-3;Q8N137-2 I3L465 CNTROB Centrobin 1 AQLY(0.006)LPS(0.092)T(0.245)S(0.658)PPHEGLDGFAQELSR 84.707 7.56E-05 13688000 30955 41825 37344 44556 42976 48711 51082 31545 39094 42248 TRUE FALSE 33324.9386 39748.03132 38589.03032 40915.63227 41288.5463 50564.73124 44374.87204 35668.03981 42494.32545 40869.45122 0.815399708 0.972560926 0.944202312 1.001129965 1.010254483 1.237225598 1.085771174 0.872731068 1.039757672 1 15.31873525 -4.039428156 0.780341771 1.039644024 0.319182202 0.355765863 0.087711088 9.001631204 1.8161023 0.03552824 7.407216325 9.13E-05 4.039428156 -0.720461822 AQNEATS(ph)TPHR ddPTM_A459_MK2206_30min_R2 1 AQNEATSTPHR 11 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 AQNEAT(0.001)S(0.966)T(0.033)PHR 101.43 0.010108 761870 4381.6 5767.7 3368.3 6690.2 5878.5 5904.8 6994 4195.3 7428.4 5512.4 TRUE FALSE 4717.058665 5481.284405 3480.597441 6143.589259 5647.680553 6129.511302 6075.679399 4743.640115 8074.508805 5332.530839 0.884581601 1.027895491 0.652710232 1.152096339 1.059099464 1.149456325 1.139361324 0.889566372 1.514198239 1 12.38060469 -5.796054862 24.99887937 1.122867528 0.872345455 0.342030859 0.173536908 201.7864293 145726.8715 0.046172285 0.068488103 1.60E-06 5.796054862 -0.250522073 AQNEATST(ph)PHR ddPTM_A459_MK2206_30min_R1 2 AQNEATSTPHR 11 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 AQNEATS(0.004)T(0.996)PHR;AQNEATS(0.032)T(0.968)PHR 141.34 0.0023661 3169600 2872.5 2625.7 1982.82 1894.05 1814.93 1959.94 2856.33 2696.15 273.55 1548.42 TRUE FALSE 2628.178791 2454.766453 1848.231703 2039.930059 1742.637495 2070.910109 2665.789437 2672.577845 301.9865014 1740.24996 1.510230629 1.410582681 1.062049559 1.172205204 1.00137195 1.190007273 1.531842838 1.535743661 0.173530532 1 10.76507883 -1.522878745 0.148652586 0.884254155 2.837729443 0.158139134 0.355288645 162.4677881 1.592478014 1.325367983 68.27161855 0.03 1.522878745 1.953475288 AQNEATST(ph)PHR ddPTM_A459_MK2206_30min_R2 2 AQNEATSTPHR 11 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 AQNEAT(0.004)S(0.033)T(0.963)PHR;AQNEAT(0.024)S(0.205)T(0.772)PHR 118.61 0.012302 9894900 24408 27054 26049 24174 24039 25529 26033 20468 24025 26745 TRUE FALSE 26276.69525 25710.5377 26917.46066 22198.90687 23095.10807 26500.52398 22614.83583 23143.23788 26114.65107 25872.31284 1.015629929 0.993747171 1.040396381 0.858017874 0.892657267 1.024281213 0.874094093 0.894517549 1.009366702 1 14.65912141 -5.739292257 24.9998512 0.931014737 1.014306781 0.294600614 0.056633568 292.4648988 330134.1609 0.015236837 0.026363166 1.82E-06 5.739292257 0.083292044 AQPEEEDEDEVS(ph)MK ddPTM_A459_MK2206_30min_R2 1 AQPEEEDEDEVSMK 14 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 AQPEEEDEDEVS(1)MK 137.91 0.00071541 0 10458 11362 8304.5 7767.2 9884.5 6770.5 9593.3 6805.1 5627.3 10418 TRUE FALSE 11258.67252 10797.7796 8581.367885 7132.594914 9496.384864 7028.156122 8333.688186 7694.549935 6116.752382 10078.06151 1.117146636 1.071414338 0.851489929 0.707734806 0.942282884 0.697371822 0.826913804 0.763495036 0.606937393 1 13.29893055 -5.290120663 3.077447302 0.785341597 1.109562232 0.544260219 0.109130446 0.174613844 3.320538505 0.027920744 0.077528554 5.13E-06 5.290120663 0.324220635 AQPGS(ph)PESSGQPK ddPTM_A459_MK2206_30min_R1 3 AQPGSPESSGQPK 13 0 Q05GC8;Q96PN7-2;Q96PN7-3;Q96PN7-4;Q96PN7-5;Q96PN7 Q05GC8 BCAR2;TRERF1 Transcriptional-regulating factor 1 1 AQPGS(0.794)PES(0.19)S(0.016)GQPK;AQPGS(0.94)PES(0.055)S(0.005)GQPK;AQPGS(0.915)PES(0.078)S(0.007)GQPK 184 0.00010981 37237600 10300 10786.3 9961.8 8993.7 8808 7375.3 9167.8 9407.7 8360.7 9027.3 TRUE FALSE 9423.930913 10084.10991 9285.620771 9686.396332 8457.158709 7792.883112 8556.23279 9325.449471 9229.824684 10145.67008 0.928862346 0.99393237 0.915229916 0.954732044 0.833573204 0.768099401 0.843338363 0.9191556 0.909730418 1 13.30857653 -6.248268403 23.99832062 0.867614217 0.949102319 0.2236138 0.060996735 627.9346549 1144132.896 0.018619826 0.023877962 5.65E-07 6.248268403 0.081488103 AQPGS(ph)PESSGQPK ddPTM_A459_MK2206_30min_R2 3 AQPGSPESSGQPK 13 0 Q05GC8;Q96PN7-2;Q96PN7-3;Q96PN7-4;Q96PN7-5;Q96PN7 Q05GC8 BCAR2;TRERF1 Transcriptional-regulating factor 1 1 AQPGS(0.764)PES(0.189)S(0.047)GQPK;AQPGS(0.978)PES(0.017)S(0.004)GQPK;AQPGS(0.914)PES(0.083)S(0.003)GQPK 147.75 0.00056482 57039800 84216 99727 92528 97220 88643 81175 108867 73303 77544 92774 TRUE FALSE 90663.64171 94774.7022 95612.83734 89276.81501 85162.43042 84264.17151 94572.63213 82883.95379 84288.63695 89746.79198 1.010215961 1.056023286 1.065362173 0.994763301 0.948918937 0.938910123 1.053771729 0.923531103 0.939182728 1 16.45357275 -5.941602841 4.663636355 0.96673422 1.044485633 0.451040884 0.037663813 0.185426306 8.294843749 0.010978743 0.016451069 1.14E-06 5.941602841 0.077751413 AQPGSPES(ph)SGQPK ddPTM_A459_MK2206_30min_R1 1 AQPGSPESSGQPK 13 0 Q05GC8;Q96PN7-2;Q96PN7-3;Q96PN7-4;Q96PN7-5;Q96PN7 Q05GC8 BCAR2;TRERF1 Transcriptional-regulating factor 1 1 AQPGS(0.111)PES(0.704)S(0.185)GQPK 170.74 0.00021987 20480000 4618.2 4393.3 4533.6 3969.5 4455.9 3520 3935.4 4213.8 3722.8 3507.4 TRUE FALSE 4225.397839 4107.295371 4225.871863 4275.231578 4278.412067 3719.299358 3672.876647 4176.959191 4109.798382 3941.923192 1.071912778 1.041952157 1.07203303 1.084554764 1.085361601 0.943524056 0.93174739 1.059624703 1.042587129 1 11.94468395 -6.742878455 24.99522447 0.995238861 1.0703324 0.499215151 0.03788752 234.3309293 315562.8411 0.013845685 0.013821687 1.81E-07 6.742878455 0.075093539 AQPGSPES(ph)SGQPK ddPTM_A459_MK2206_30min_R2 1 AQPGSPESSGQPK 13 0 Q05GC8;Q96PN7-2;Q96PN7-3;Q96PN7-4;Q96PN7-5;Q96PN7 Q05GC8 BCAR2;TRERF1 Transcriptional-regulating factor 1 1 AQPGS(0.31)PES(0.669)S(0.021)GQPK 173.33 0.00015233 4148600 20778 22967 21561 20861 25193 17143 23964 20718 17150 20854 TRUE FALSE 22368.77966 21826.49218 22279.83298 19156.58957 24203.79624 17795.38888 20817.49801 23425.91374 18641.676 20173.53569 1.108818008 1.081936876 1.104408931 0.94959009 1.199779583 0.882115518 1.031921143 1.161220031 0.92406588 1 14.30017634 -1.522878751 0.27154723 1.011218009 1.743864643 0.104318634 0.094109943 135.4887063 1.895128853 0.105720092 46.6103766 0.03 1.522878751 0.732646633 AQPQDSATFAHT(ph)PPPAQATPAPGFK ddPTM_A459_MK2206_30min_R2 2 AQPQDSATFAHTPPPAQATPAPGFK 25 0 A0A0A0MQV9;Q9UPS6-2;Q9UPS6 A0A0A0MQV9 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B 1 AQPQDS(0.005)AT(0.014)FAHT(0.981)PPPAQATPAPGFK;AQPQDSATFAHT(0.999)PPPAQATPAPGFK 103.25 1.86E-06 14038300 71476 76393 72588 78360 64868 69687 80552 57689 62353 60402 TRUE FALSE 76948.25752 72599.43471 75008.04769 71957.73734 62320.95638 72338.98762 69975.42564 65229.15038 67776.35123 58431.08769 1.316906129 1.242479604 1.283701034 1.231497482 1.066571903 1.238022267 1.197571848 1.116343251 1.159936498 1 15.83444852 -1.522878809 0.045313462 0.569366022 2.267945905 0.684299116 0.05305687 360.9758868 1.244736955 11.81198463 44.61949547 0.029999996 1.522878809 1.698579884 AQPS(ph)MSPK ddPTM_A459_MK2206_30min_R1 1 AQPSMSPK 8 0 Q969S3 Q969S3 ZNF622 Zinc finger protein 622 1 AQPS(0.698)MS(0.302)PK 83.883 0.037826 19726000 5277.3 5736.2 6226.5 5061.9 3429.3 3435.5 4105.8 4432.1 4791.7 4036.4 TRUE FALSE 4828.437923 5362.772337 5803.862528 5451.768415 3292.703719 3630.015041 3831.909573 4393.350617 5289.814362 4536.459705 1.064362573 1.182149228 1.279381479 1.201767186 0.72583114 0.800186771 0.844691637 0.968453574 1.166066648 1 12.14735113 -6.237272036 24.57201595 0.906451065 1.188893776 0.523838563 0.123139404 520.1685326 528878.2579 0.039093651 0.050441343 5.79E-07 6.237272036 0.282442711 AQPS(ph)SSEDELDNVFFK ddPTM_A459_MK2206_30min_R2 1 AQPSSSEDELDNVFFK 16 0 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 AQPS(0.647)S(0.176)S(0.176)EDELDNVFFK 91.961 0.0207 0 5099.1 5937.7 5433.7 5562.5 4826.4 5554.3 5047.8 4503.7 5870.6 5812.6 TRUE FALSE 5489.491017 5642.842452 5614.856846 5108.025956 4636.891285 5765.672779 4385.017797 5092.349054 6381.214176 5622.935338 0.976267854 1.003540342 0.998563296 0.908426942 0.824638913 1.025384863 0.779844962 0.905638914 1.134854625 1 12.45710774 -8.249548394 24.91599614 1.067427315 0.926910582 0.3238854 0.080693474 743.3903961 1557685.399 0.056553176 0.020997307 5.63E-09 8.249548394 -0.140516733 AQPSMS(ph)PK ddPTM_A459_MK2206_30min_R1 3 AQPSMSPK 8 0 Q969S3 Q969S3 ZNF622 Zinc finger protein 622 1 AQPS(0.002)MS(0.998)PK;AQPS(0.118)MS(0.882)PK;AQPS(0.013)MS(0.987)PK 107.11 0.01344 153335000 22590.5 27320.1 26105.7 23947.9 16016.2 13837.9 17009.7 18739.7 19332.2 19165.4 TRUE FALSE 20669.05935 25541.55652 24333.71782 25792.37141 15378.24084 14621.38994 15875.01395 18575.86078 21341.85137 21539.75444 0.959577297 1.185786801 1.129711942 1.197431079 0.713946897 0.6788095 0.737009978 0.862398911 0.990812195 1 14.39471418 -6.258791169 24.99873763 0.811357539 1.123787158 0.584925746 0.118003366 162.8626331 1537399.503 0.03677252 0.045310218 5.51E-07 6.258791169 0.312429619 AQPSMS(ph)PK ddPTM_A459_MK2206_30min_R2 3 AQPSMSPK 8 0 Q969S3 Q969S3 ZNF622 Zinc finger protein 622 1 AQPS(0.138)MS(0.862)PK;AQPS(0.005)MS(0.995)PK;AQPS(0.056)MS(0.944)PK 98.898 0.019087 187862000 617990 539620 562920 480000 496540 356525 662930 517200 409030 583100 TRUE FALSE 665303.7896 512823.2555 581687.4718 440782.4646 477043.3447 370092.8087 575886.4947 584799.8158 444606.69 564073.4948 1.179462953 0.909142621 1.031226387 0.781427365 0.845711329 0.656107426 1.020942306 1.036744008 0.788207023 1 19.10552362 AQPSS(ph)SEDELDNVFFK ddPTM_A459_MK2206_30min_R2 1 AQPSSSEDELDNVFFK 16 0 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 AQPS(0.149)S(0.615)S(0.236)EDELDNVFFK 90.561 0.022829 0 6418.9 9255.5 6292.2 9010.3 7505.2 6903.1 9482.5 7663.3 7851 6191.5 TRUE FALSE 6910.335919 8795.885329 6501.978808 8274.129667 7210.508137 7165.802308 8237.436359 8664.919622 8533.865789 5989.471862 1.153747121 1.468557751 1.085567969 1.38144562 1.203863764 1.196399695 1.375319318 1.446691765 1.424811066 1 12.54821308 -7.274142566 24.34566299 1.348929856 1.25491731 0.015516803 0.156320452 1516.937885 2907199.533 0.061130951 0.041553343 5.32E-08 7.274142566 -0.094012545 AQPSSS(ph)EDELDNVFFK ddPTM_A459_MK2206_30min_R1 2 AQPSSSEDELDNVFFK 16 0 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 AQPS(0.003)S(0.043)S(0.954)EDELDNVFFK;AQPS(0.001)S(0.03)S(0.97)EDELDNVFFK 179.14 1.08E-06 13668300 2703.7 2052.61 1830.84 1565.31 1847.23 2040.26 2488.2 1905.38 2190.13 1756.43 TRUE FALSE 2473.736117 1918.984716 1706.567682 1685.870447 1773.650918 2155.777758 2322.216718 1888.721464 2417.801851 1974.029809 1.253140204 0.972115369 0.86450958 0.854024818 0.898492469 1.092069506 1.176383815 0.956784672 1.224805137 1 10.94692806 -6.777889095 24.33863854 1.092706187 0.956527626 0.182521147 0.127312927 294.6438837 435945.1655 0.045802374 0.040518704 1.67E-07 6.777889095 -0.136178561 AQQCVS(ph)PSSSLCR ddPTM_A459_MK2206_30min_R1 3 AQQCVSPSSSLCR 13 0 B9EGE7;Q8TCN5-2;Q8TCN5 B9EGE7 ZNF507 Zinc finger protein 507 1 AQQCVS(0.483)PS(0.483)S(0.017)S(0.018)LCR;AQQCVS(0.476)PS(0.476)S(0.048)SLCR;AQQCVS(0.755)PS(0.22)S(0.022)S(0.002)LCR 183.28 0.00010533 30966300 8669.7 8079.9 7765.8 6817.5 8521.3 7740.5 8100 6966.8 7822 7530.2 TRUE FALSE 7932.296489 7553.897041 7238.679133 7342.585031 8181.878577 8178.760421 7559.663779 6905.890002 8635.124891 8463.098026 0.937280469 0.892568775 0.855322615 0.86760014 0.966771099 0.966402657 0.893250173 0.816000238 1.020326701 1 13.04697016 -8.290574222 24.95565013 1.01016342 0.900916795 0.486712115 0.045477701 736.8389 631137.393 0.046813884 0.012095611 5.12E-09 8.290574222 -0.109246625 AQQCVS(ph)PSSSLCR ddPTM_A459_MK2206_30min_R2 3 AQQCVSPSSSLCR 13 0 B9EGE7;Q8TCN5-2;Q8TCN5 B9EGE7 ZNF507 Zinc finger protein 507 1 AQQCVS(0.582)PS(0.417)S(0.001)SLCR;AQQCVS(0.775)PS(0.225)SSLCR;AQQCVS(0.823)PS(0.163)S(0.014)SLCR 198.81 0.00011134 52135000 136412 144069 148274 163037 152574 127220 158600 128856 126564 151956 TRUE FALSE 146855.8076 136914.743 153217.3812 149716.3556 146583.1781 132061.4462 137775.6295 145697.9216 137572.3079 146997.6882 0.999034811 0.931407457 1.042311502 1.018494627 0.99718016 0.898391314 0.93726392 0.991157912 0.935880759 1 17.16543394 -6.600196451 24.99999982 0.950670408 0.997699063 0.265862123 0.037447703 48.65876448 15731.08611 0.01260789 0.012607888 2.51E-07 6.600196451 0.047028655 AQQCVSPS(ph)SSLCR ddPTM_A459_MK2206_30min_R1 1 AQQCVSPSSSLCR 13 0 B9EGE7;Q8TCN5-2;Q8TCN5 B9EGE7 ZNF507 Zinc finger protein 507 1 AQQCVS(0.181)PS(0.81)S(0.008)SLCR 169.17 4.66E-07 0 2616 2115.9 2628.9 1882.2 3330.1 3262 3171.1 2126.2 2106 1912.3 TRUE FALSE 2393.495463 1978.154525 2450.457593 2027.16737 3197.455065 3446.691621 2959.561705 2107.610858 2324.926236 2149.210161 1.113662827 0.92041 1.140166577 0.94321505 1.487734947 1.603701529 1.377046209 0.980644376 1.081758442 1 11.06959085 -6.242367188 24.93044273 1.277702447 1.029495704 0.228541809 0.200671541 1245.358983 1627885.913 0.064996193 0.083773688 5.72E-07 6.242367188 -0.248206743 AQQCVSPS(ph)SSLCR ddPTM_A459_MK2206_30min_R2 1 AQQCVSPSSSLCR 13 0 B9EGE7;Q8TCN5-2;Q8TCN5 B9EGE7 ZNF507 Zinc finger protein 507 1 AQQCVS(0.228)PS(0.766)S(0.006)SLCR 214.48 1.88E-06 16137000 25779 31131 26450 25807 27722 30203 31822 24747 24744 30965 TRUE FALSE 27752.66006 29585.07981 27331.8298 23698.48555 26633.49499 31352.39633 27643.73317 27981.51787 26896.18839 29954.61459 0.926490307 0.987663511 0.912441378 0.791146402 0.889128281 1.046663319 0.922853909 0.934130459 0.897897996 1 14.87049065 AQQELEEQTRR ddPTM_A459_MK2206_30min_R1 2 AQQELEEQTRR 11 1 P26038 P26038 MSN Moesin 0 ; 134.38 0.002219 28278000 5303.3 5357.7 5369.3 5237.1 6948.6 5696 5649.6 6152.3 3922.2 3564.7 FALSE TRUE 4852.226486 5008.912756 5004.846876 5640.462349 6671.822548 6018.502598 5272.725492 6098.51109 4329.926726 4006.321948 1.211142427 1.250252182 1.249237316 1.407890435 1.665323615 1.502251361 1.316101292 1.52222192 1.080773533 1 11.96806265 -8.386745451 5.123312539 1.006354033 1.391443562 0.518363321 0.135720359 0.193364097 6.772797969 0.144665816 0.037703847 4.10E-09 8.386745451 0.385089529 AQQELVPPQQQAS(ph)PPQLPK ddPTM_A459_MK2206_30min_R1 2 AQQELVPPQQQASPPQLPK 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 AQQELVPPQQQAS(1)PPQLPK;AQQELVPPQQQAS(1)PPQLPK 102.16 0.00073793 24002000 10277.5 10239 9384.3 8590.3 9785.1 8375.7 9205.5 9224.2 8926.1 8989.1 TRUE FALSE 9403.344656 9572.439239 8747.319862 9251.926394 9395.338747 8849.924896 8591.417891 9143.553792 9854.000037 10102.73757 0.930771941 0.947509442 0.865836591 0.915784096 0.929979491 0.875992753 0.850404935 0.905057043 0.975379195 1 13.30245866 -8.334469049 3.577368288 0.997170116 0.901383887 0.579588674 0.029280467 0.17654964 4.13716387 0.029638187 0.008034216 4.63E-09 8.334469049 -0.095786229 AQQELVPPQQQAS(ph)PPQLPK ddPTM_A459_MK2206_30min_R2 2 AQQELVPPQQQASPPQLPK 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 AQQELVPPQQQAS(1)PPQLPK;AQQELVPPQQQAS(1)PPQLPK 139.51 8.70E-05 36813000 195325 241050 205042 246150 231120 199809 259240 191034 193385 233330 TRUE FALSE 210279.2322 229079.8075 211877.9979 226038.7576 222045.0675 207412.8715 225201.4766 216002.7997 210205.2777 225716.4612 0.931607872 1.014900758 0.938690944 1.001427882 0.983734489 0.918908928 0.997718445 0.956965206 0.931280229 1 17.78415211 AQQQEEQGS(ph)VNDVKEEEKEEK ddPTM_A459_MK2206_30min_R1 1 AQQQEEQGSVNDVKEEEKEEK 21 2 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 AQQQEEQGS(1)VNDVKEEEKEEK 97.083 0.00041706 8450900 1215.9 1604.6 1338.3 1057.3 543.75 718.26 874.52 962.58 1261.1 1407.4 TRUE FALSE 1112.48132 1500.140248 1247.459925 1138.733429 522.0912861 758.9272605 816.1823665 954.1642645 1392.195858 1581.759337 0.703318952 0.948399806 0.788653429 0.719915731 0.330069988 0.47979945 0.515996553 0.603229734 0.880156561 1 10.6273144 -10.80491663 15.85932562 0.999999993 0.655726037 0.24121922 0.178707668 0 0 0.19361831 0.046959338 1.57E-11 10.80491663 -0.344273956 AQQQEEQGS(ph)VNDVKEEEKEEK ddPTM_A459_MK2206_30min_R2 2 AQQQEEQGSVNDVKEEEKEEK 21 2 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 AQQQEEQGS(1)VNDVKEEEKEEK;AQQQEEQGS(1)VNDVKEEEKEEK 51.966 0.019482 111249000 158730 116112 138181 100485 102648 49777 137257 101975 67002 156311 TRUE FALSE 170882.4908 110346.0469 142787.8856 92275.05406 98617.52376 51671.29862 119234.991 115303.4826 72829.71285 151210.5849 1.130096091 0.729750811 0.944298216 0.610242029 0.652186643 0.341717471 0.788536008 0.762535789 0.481644277 1 17.20619961 -1.522881844 0.760773496 0.654312801 87.87425776 0.327136699 0.186013978 448.4602638 1.850379785 0.066885452 67123.65247 0.029999786 1.522881844 87.21994496 AQS(ph)GSDSSPEPK ddPTM_A459_MK2206_30min_R2 1 AQSGSDSSPEPK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQS(0.936)GS(0.048)DS(0.008)S(0.008)PEPK 90.759 0.025174 0 7809.8 6722.2 7131.1 8214.5 9782.9 7736.5 8591.7 7406.2 8506.8 7947.8 TRUE FALSE 8407.724293 6388.385323 7368.847315 7543.349073 9398.774191 8030.917929 7463.59947 8374.215769 9246.706087 7688.463937 1.093550592 0.830905286 0.958429067 0.981125636 1.222451489 1.044541276 0.970753005 1.089192307 1.202672753 1 12.90847968 -6.023109851 23.85343965 1.086222572 0.951592857 0.28648498 0.094549927 519.7134633 536436.0545 0.02776331 0.036133181 9.48E-07 6.023109851 -0.134629715 AQS(ph)LAEQTSDTAGLESSTR ddPTM_A459_MK2206_30min_R2 1 AQSLAEQTSDTAGLESSTR 19 0 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 AQS(0.998)LAEQT(0.002)S(0.001)DTAGLESSTR 191.44 2.96E-15 2734200 12817 14945 14451 12887 11318 11977 15072 9455.5 13565 15051 TRUE FALSE 13798.27937 14202.85303 14932.78913 11834.09088 10873.59845 12432.79313 13093.0283 10691.36632 14744.85918 14559.8871 0.947691371 0.975478239 1.025611601 0.812787269 0.746818871 0.853907248 0.899253422 0.734302831 1.012704225 1 13.82971155 -5.762931723 24.99997046 0.850566827 0.982182197 0.254599159 0.089347243 46.08577217 772059.9236 0.023847676 0.037627485 1.73E-06 5.762931723 0.13161537 AQS(ph)LLSTDR ddPTM_A459_MK2206_30min_R2 2 AQSLLSTDR 9 0 J3QRY4;O00231;O00231-2 J3QRY4 PSMD11 26S proteasome non-ATPase regulatory subunit 11 1 AQS(1)LLSTDR;AQS(1)LLSTDR 114.76 0.0083808 13235700 38830 45708 44223 42035 41819 47912 52004 43251 62563 53957 TRUE FALSE 41802.85466 43438.20719 45697.37275 38600.60604 40176.97594 49735.32473 45175.81233 48904.0542 68004.61665 52196.38751 0.800876395 0.832207156 0.875489185 0.73952639 0.769727137 0.952849941 0.865496914 0.936924116 1.302860598 1 15.67166234 -8.052262793 4.56020738 1.150743626 0.836737137 0.668870128 0.08817774 0.121576176 5.297109918 0.060702136 0.022527268 8.87E-09 8.052262793 -0.314006489 AQS(ph)PGAVEEILDR ddPTM_A459_MK2206_30min_R1 4 AQSPGAVEEILDR 13 0 E9PHY4;Q9NYM9;H7BXT7;A0A0C4DH16;B8ZZS0 E9PHY4 BET1L BET1-like protein 1 AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR 173.19 0.00015596 40853100 6101.5 6953.1 6085.86 4849.48 7783.3 6464.9 7717.8 6570.8 7414.4 6777.91 TRUE FALSE 5582.535385 6500.451926 5672.768779 5222.98779 7473.27468 6830.937051 7202.959644 6513.352188 8185.153413 7617.608661 0.732846177 0.853345481 0.744691547 0.685646641 0.981052586 0.896729847 0.945567036 0.85503896 1.07450432 1 12.89512246 -6.269297998 24.99922013 0.94780071 0.760544753 0.682582232 0.068075305 373.7501049 1188942.284 0.020613404 0.023797985 5.38E-07 6.269297998 -0.187255957 AQS(ph)PGAVEEILDR ddPTM_A459_MK2206_30min_R2 4 AQSPGAVEEILDR 13 0 E9PHY4;Q9NYM9;H7BXT7;A0A0C4DH16;B8ZZS0 E9PHY4 BET1L BET1-like protein 1 AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR 215.15 1.01E-06 28841000 79112 85413 77228 87670 70728 81054 89742 58525 67560 79030 TRUE FALSE 85168.87555 81171.51462 79802.74298 80507.08056 67950.86334 84138.56677 77958.7676 66174.41845 73436.24668 76451.25757 1.114028444 1.061742046 1.043838198 1.053051096 0.888812892 1.100551769 1.019718577 0.865576585 0.960562965 1 16.22225261 -4.614213971 0.397768471 0.955559882 1.243630507 0.343164898 0.06426335 7.799638819 0.881345444 0.054909556 1.10445198 2.43E-05 4.614213971 0.288070625 AQS(ph)PGSPLHAR ddPTM_A459_MK2206_30min_R2 1 AQSPGSPLHAR 11 0 Q13796 Q13796 SHROOM2 Protein Shroom2 1 AQS(1)PGSPLHAR 89.26 0.019506 5970300 10867 20297 15106 28976 29848 33253 24611 25554 29960 15802 TRUE FALSE 11698.98588 19289.08049 15609.6265 26608.56811 28676.01755 34518.46622 21379.54614 28893.99554 32565.86664 15286.38203 0.765320784 1.261847339 1.021145911 1.740671406 1.875919199 2.258118771 1.3986008 1.890178819 2.130384192 1 13.89995937 -5.782904029 5.466922864 1.808808042 1.036017851 0.472291446 0.355727234 0.139097755 11.91566219 0.095717936 0.1512233 1.65E-06 5.782904029 -0.772790191 AQS(ph)PSYVISTGVSPSR ddPTM_A459_MK2206_30min_R1 3 AQSPSYVISTGVSPSR 16 0 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 AQS(0.496)PS(0.496)YVIS(0.006)TGVS(0.001)PSR;AQS(0.961)PS(0.039)YVISTGVSPSR;AQS(0.378)PS(0.378)YVIS(0.216)T(0.018)GVS(0.01)PSR 156.17 8.57E-05 26251000 6161.9 6385.69 6194.52 5625.3 6485.6 6787.5 7565.1 5425.54 6503.1 5776.38 TRUE FALSE 5637.798048 5969.98042 5774.053241 6058.561581 6227.264819 7171.802384 7060.445982 5378.105076 7179.120517 6492.001564 0.868422164 0.919590108 0.889410328 0.933234769 0.95922109 1.104713595 1.087560733 0.828420176 1.105840848 1 12.66444763 -6.339934218 2.680761992 1.018578335 0.899641383 0.3546913 0.077128889 0.343844471 4.839581817 0.025856625 0.030877352 4.57E-07 6.339934218 -0.118936952 AQS(ph)SPAAPASLSAPEPASQAR ddPTM_A459_MK2206_30min_R1 3 AQSSPAAPASLSAPEPASQAR 21 0 J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;Q8WUI4-10;H0YI15 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 AQS(0.5)S(0.5)PAAPASLSAPEPASQAR;AQS(0.5)S(0.5)PAAPASLSAPEPASQAR;AQS(0.5)S(0.5)PAAPASLSAPEPASQAR 286.92 1.62E-86 73326000 7083.1 5637.76 5825.3 4585.5 6116 5150.1 6380.5 5743.5 5287.91 4720.59 TRUE FALSE 6480.64515 5270.740799 5429.894866 4938.676005 5872.386769 5441.694211 5954.868487 5693.285185 5837.607167 5305.412328 1.221515831 0.993464876 1.023463311 0.930875057 1.106867178 1.025687331 1.12241389 1.0731089 1.100311683 1 12.37324916 -7.232713033 24.525281 1.080051059 1.043649601 0.01515226 0.077627999 2039.862719 1741543.646 0.029174638 0.022594201 5.85E-08 7.232713033 -0.036401458 AQS(ph)SPAAPASLSAPEPASQAR ddPTM_A459_MK2206_30min_R2 4 AQSSPAAPASLSAPEPASQAR 21 0 J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;Q8WUI4-10;H0YI15 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 AQS(0.498)S(0.498)PAAPAS(0.002)LS(0.001)APEPASQAR;AQS(0.941)S(0.059)PAAPASLSAPEPASQAR;AQS(0.58)S(0.104)PAAPAS(0.271)LS(0.045)APEPASQAR;AQS(0.721)S(0.279)PAAPASLSAPEPASQAR 174.87 2.21E-11 183214900 154314 145422 161051 177387 140894 134152 154659 114445 120060 144375 TRUE FALSE 166128.3985 138200.5549 166420.36 162893.9147 135361.7936 139257.2484 134352.0875 129403.3544 130502.6018 139664.0556 1.189485711 0.989521279 1.191576167 1.166326683 0.969195639 0.997087245 0.961966105 0.926532986 0.934403639 1 17.09160125 -6.271736786 23.4833519 0.962657135 1.127987638 0.674085899 0.057614839 188.6342663 430181.778 0.017899863 0.020551553 5.35E-07 6.271736786 0.165330504 AQS(ph)SPASATFPVSVQEPPTKPR ddPTM_A459_MK2206_30min_R1 2 AQSSPASATFPVSVQEPPTKPR 22 1 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 AQS(0.771)S(0.229)PASATFPVSVQEPPTKPR;AQS(0.756)S(0.244)PASATFPVSVQEPPTKPR 199.8 1.24E-22 152754000 4568.2 3827.7 4251.2 3663.7 3863.3 3203.9 4158.8 4129.3 3379.6 3316.6 TRUE FALSE 4179.650601 3578.516034 3962.640389 3945.878809 3709.41658 3385.302049 3881.37404 4093.197965 3730.921514 3727.485447 1.121305679 0.960034877 1.06308675 1.058589997 0.995152532 0.908199937 1.041284827 1.098112393 1.000921819 1 11.863987 -4.739766952 24.47178089 1.016893001 1.1213062 0.275171937 0.052080885 1967.469671 2221451.054 0.013639237 0.628698532 1.82E-05 4.739766952 0.1044132 AQS(ph)SPASATFPVSVQEPPTKPR ddPTM_A459_MK2206_30min_R2 4 AQSSPASATFPVSVQEPPTKPR 22 1 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 AQS(0.921)S(0.073)PAS(0.006)AT(0.001)FPVSVQEPPTKPR;AQS(0.764)S(0.236)PASATFPVSVQEPPTKPR;AQS(0.945)S(0.054)PASATFPVSVQEPPTKPR;AQS(0.943)S(0.056)PAS(0.001)ATFPVSVQEPPTKPR 178.05 2.23E-16 288470000 216653 243090 239060 244155 219397 214938 248821 187916 201198 240071 TRUE FALSE 233240.1203 231018.5041 247030.1411 224206.7555 210782.3714 223117.6162 216150.5038 212477.2664 218697.8384 232237.5029 1.004317207 0.994751068 1.063696164 0.965420109 0.907615561 0.960730345 0.930730399 0.914913671 0.941699061 1 17.82524144 -5.963743685 8.098362015 0.938455693 1.017992562 0.583202351 0.029457642 0.151439962 29.2498222 0.007915645 0.011714455 1.09E-06 5.963743685 0.079536869 AQS(ph)TDSLGTSGSLQSK ddPTM_A459_MK2206_30min_R1 2 AQSTDSLGTSGSLQSK 16 0 Q15276-2;Q15276;I3L456 Q15276-2 RABEP1 Rab GTPase-binding effector protein 1 1 AQS(0.499)T(0.499)DS(0.002)LGTSGSLQSK;AQS(0.479)T(0.479)DS(0.04)LGT(0.001)S(0.001)GSLQSK 289.95 1.34E-74 25295500 3949.1 3412.39 3788.7 2756.19 3751.8 3191 4938.5 3457.3 3708.9 4112.5 TRUE FALSE 3613.208307 3190.242791 3531.5336 2968.472231 3602.357861 3371.671662 4609.061676 3427.073191 4094.453427 4621.987548 0.78174341 0.690231801 0.764072504 0.642250158 0.779395839 0.729485233 0.997203395 0.741471749 0.885864227 1 12.17429766 -7.227067239 23.30357607 0.884590801 0.728976615 0.535529238 0.078782371 226.9021243 153834.6687 0.028667725 0.022204003 5.93E-08 7.227067239 -0.155614186 AQS(ph)YDIQAWK ddPTM_A459_MK2206_30min_R2 2 AQSYDIQAWK 10 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 AQS(1)YDIQAWK;AQS(1)YDIQAWK 110.25 0.009573 6423100 42532 53173 45656 50348 43770 42009 48028 34882 38823 48648 TRUE FALSE 45788.28262 50532.50614 47178.14825 46234.40734 42051.36987 43607.68193 41721.86591 39441.19717 42199.75436 47060.61974 0.972963868 1.07377477 1.002497385 0.982443657 0.893557503 0.926627872 0.886555811 0.83809345 0.896710553 1 15.5222327 -6.086473604 2.058786875 0.897108685 1.024011567 0.542397587 0.045481485 0.219226064 1.840119795 0.014404623 0.021261708 8.19E-07 6.086473604 0.126902882 AQS(ph)YPDNHQEFSDYDNPIFEK ddPTM_A459_MK2206_30min_R1 4 AQSYPDNHQEFSDYDNPIFEK 21 0 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 AQS(0.985)Y(0.013)PDNHQEFS(0.002)DYDNPIFEK;AQS(0.994)Y(0.006)PDNHQEFSDYDNPIFEK;AQS(1)YPDNHQEFSDYDNPIFEK;AQS(0.999)Y(0.001)PDNHQEFSDYDNPIFEK 169.88 1.52E-10 102508800 17658.8 16898 16929.6 16389.6 17605.3 16185.5 17490.9 16970.2 15272.4 13966.6 TRUE FALSE 16156.82633 15797.93713 15780.46592 17651.92983 16904.04362 17101.90902 16324.11397 16821.83133 16860.02063 15696.88785 1.029301253 1.006437536 1.005324499 1.124549656 1.076904147 1.089509538 1.039958629 1.071666657 1.074099579 1 13.93819093 -5.724599962 24.99973054 1.071171026 1.012962664 0.389594811 0.031039774 159.4461388 108201.1471 0.008094602 0.014019786 1.89E-06 5.724599962 -0.058208362 AQS(ph)YPDNHQEFSDYDNPIFEK ddPTM_A459_MK2206_30min_R2 4 AQSYPDNHQEFSDYDNPIFEK 21 0 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 AQS(0.804)Y(0.192)PDNHQEFS(0.003)DYDNPIFEK;AQS(0.91)Y(0.09)PDNHQEFSDYDNPIFEK;AQS(0.751)Y(0.249)PDNHQEFSDYDNPIFEK;AQS(0.955)Y(0.044)PDNHQEFSDYDNPIFEK 108.49 8.19E-05 41319900 105371 125683 111380 112972 113299 104640 113089 92060 96062 108996 TRUE FALSE 113438.2848 119441.765 115093.3536 103741.8262 108850.312 108622.1485 98240.27846 104092.5581 104417.2991 105439.4694 1.07586168 1.132799374 1.091558543 0.983899357 1.032348821 1.030184893 0.931722048 0.987225738 0.99030562 1 16.68605549 -5.718950286 5.480538698 0.993567545 1.105374946 0.734999863 0.029284103 0.096854336 6.846566023 0.008472805 0.014560279 1.91E-06 5.718950286 0.111807401 AQSEGRPCEYNSR ddPTM_A459_MK2206_30min_R1 2 AQSEGRPCEYNSR 13 1 O00622 O00622 CYR61 Protein CYR61 0 ; 117.95 0.0099123 5149900 2228.15 1791.13 1833.72 1901.81 2598.5 1829.33 2061.08 1860.02 1341.21 1163.45 FALSE TRUE 2038.634142 1674.527111 1709.252195 2048.287736 2494.996243 1932.905084 1923.589114 1843.758041 1480.633579 1307.58697 1.559081108 1.28062389 1.307180505 1.566463863 1.908092005 1.478222962 1.471098411 1.410046203 1.132340421 1 10.35269119 -8.287264429 1.817368616 0.998290211 1.511748159 0.54912652 0.161107843 0.289122502 1.807931786 0.168466161 0.049566163 5.16E-09 8.287264429 0.513457947 AQSGSDS(ph)SPEPK ddPTM_A459_MK2206_30min_R1 4 AQSGSDSSPEPK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQS(0.004)GS(0.088)DS(0.454)S(0.454)PEPK;AQSGS(0.018)DS(0.713)S(0.269)PEPK;AQSGS(0.007)DS(0.711)S(0.281)PEPK;AQSGS(0.007)DS(0.496)S(0.496)PEPK 155.14 0.00042332 22897000 31001.7 29395.6 20738.3 21559.1 11869.9 11658.4 23554.9 27255.2 2614.8 14231.7 TRUE FALSE 28364.84262 27481.9411 19330.64198 23219.58562 11397.09675 12318.48853 21983.5956 27016.91066 2886.617817 15994.83044 1.773375637 1.718176457 1.208555605 1.45169314 0.712548769 0.770154368 1.374418796 1.689102661 0.180471924 1 13.96531808 -5.398822544 1.23295233 1.018722858 1.853532216 0.349968811 0.397493529 0.78182349 1.94705332 0.131271792 0.630047256 3.99E-06 5.398822544 0.834809357 AQSGSDS(ph)SPEPK ddPTM_A459_MK2206_30min_R2 3 AQSGSDSSPEPK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQSGS(0.027)DS(0.486)S(0.486)PEPK;AQSGS(0.002)DS(0.726)S(0.272)PEPK;AQS(0.003)GS(0.277)DS(0.443)S(0.277)PEPK 160.46 0.000473 46815500 110853 107372 100617 95782 129055 78652 128243 121993 106179 114275 TRUE FALSE 119339.9909 102040.0626 103971.5206 87956.30421 123987.6523 81645.15697 111404.5401 137937.904 115414.2575 110546.2161 1.079548402 0.923053418 0.940525368 0.795651876 1.121591101 0.738561299 1.00776439 1.247784943 1.044036255 1 16.75429012 -7.52820482 24.91716947 1.113101337 0.930164241 0.263098713 0.122321144 164.0364282 767400.9849 0.053943405 0.031274342 2.96E-08 7.52820482 -0.182937096 AQSGSDSS(ph)PEPK ddPTM_A459_MK2206_30min_R1 1 AQSGSDSSPEPK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQSGS(0.001)DS(0.242)S(0.757)PEPK 153.14 0.0011316 0 1528.5 1632.7 1382.6 1384.5 994.49 1003.5 1721.8 1452.6 461.27 1258.5 TRUE FALSE 1398.493049 1526.410933 1288.752964 1491.13443 954.8773574 1060.317303 1606.941864 1439.900071 509.2206672 1414.412481 0.988744844 1.079183727 0.9111578 1.054242981 0.675105296 0.749652111 1.136119686 1.018019913 0.360022747 1 10.4659872 -6.233326241 24.70248305 0.83602751 1.006452125 0.159938789 0.206632323 1360.425829 1195379.981 0.061814593 0.079783771 5.84E-07 6.233326241 0.170424615 AQSGSDSS(ph)PEPK ddPTM_A459_MK2206_30min_R2 1 AQSGSDSSPEPK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQSGS(0.001)DS(0.189)S(0.81)PEPK 128.95 0.0023784 3265300 20962 20551 20777 19310 22308 20793 27070 19679 17830 22806 TRUE FALSE 22566.86684 19530.46722 21469.69481 17732.31123 21432.07583 21584.29219 23515.67648 22251.11287 19380.82117 22061.84209 1.022891323 0.885260041 0.973159663 0.803754789 0.971454503 0.978354033 1.065898142 1.008579101 0.878477014 1 14.42926564 -6.504115754 24.60422172 0.98990061 0.918051653 0.167699354 0.068514496 1036.521635 1359209.971 0.021233736 0.023654502 3.13E-07 6.504115754 -0.071848957 AQSLLS(ph)TDR ddPTM_A459_MK2206_30min_R2 1 AQSLLSTDR 9 0 J3QRY4;O00231;O00231-2 J3QRY4 PSMD11 26S proteasome non-ATPase regulatory subunit 11 1 AQS(0.371)LLS(0.569)T(0.061)DR 110.54 0.010792 5343400 21132 25283 22613 24344 26171 28380 32958 20474 34550 27545 TRUE FALSE 22749.88217 24027.48298 23366.90613 22355.01733 25143.39504 29460.02079 28630.57501 23150.0221 37555.09655 26646.20891 0.853775569 0.901722383 0.876931732 0.838956769 0.943601213 1.105598957 1.07447086 0.868792337 1.409397362 1 14.70164267 -6.609982337 3.7048396 1.082235776 0.872109373 0.40853316 0.127585176 0.243966319 6.5407444 0.041801305 0.042050521 2.45E-07 6.609982337 -0.210126403 AQSLVIS(ph)PPAPSPR ddPTM_A459_MK2206_30min_R2 1 AQSLVISPPAPSPR 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AQSLVIS(0.941)PPAPS(0.059)PR 93.495 0.014364 7071600 10700 13625 11225 15304 12869 18935 20128 18157 15068 18584 TRUE FALSE 11519.20023 12948.40231 11599.2359 14053.61424 12363.6984 19655.58469 17485.16942 20530.18224 16378.5874 17977.6056 0.64075275 0.720251773 0.645204715 0.781728922 0.687727758 1.093337185 0.972608356 1.141986463 0.911054996 1 14.13391326 -6.755823346 24.99991577 1.029472253 0.698565677 0.847491953 0.069682554 46.99452672 209197.2702 0.021757089 0.021180827 1.75E-07 6.755823346 -0.330906576 AQSLVISPPAPS(ph)PR ddPTM_A459_MK2206_30min_R1 2 AQSLVISPPAPSPR 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AQSLVISPPAPS(1)PR;AQSLVISPPAPS(1)PR 142.4 0.00054645 64993000 5928.3 6001.5 5160.4 3621.6 5673.6 6277.2 4306.5 5489 5209.7 3967.4 TRUE FALSE 5424.066954 5610.801259 4810.126426 3900.53626 5447.608498 6632.609639 4019.221243 5441.010252 5751.266958 4458.911464 1.216455406 1.258334305 1.078766974 0.874773202 1.221735067 1.487495254 0.901390681 1.220255279 1.289836545 1 12.12247584 -3.431569926 17.3247159 1.158052188 1.194931338 0 0.180189005 0 0 0.041539217 0 0.000370195 3.431569926 0.03687915 AQSLVISPPAPS(ph)PR ddPTM_A459_MK2206_30min_R2 3 AQSLVISPPAPSPR 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AQSLVISPPAPS(1)PR;AQSLVIS(0.004)PPAPS(0.996)PR;AQSLVISPPAPS(1)PR 191.41 0.00010635 50559100 106720 126113 88766 138261 113839 125587 173645 143683 92205.8 109816 TRUE FALSE 114890.5653 119850.4118 91725.41414 126964.634 109369.1089 130366.3013 150845.2029 162462.8614 100225.6938 106232.7129 1.081498929 1.128187434 0.863438499 1.195155716 1.029523824 1.227176617 1.419950586 1.529311047 0.94345415 1 16.69686857 -6.84901804 4.953480239 1.274082793 1.060179699 0.144894653 0.182858245 0.31464001 13.21053301 0.064102842 0.05682222 1.42E-07 6.84901804 -0.213903094 AQSNGSGNGS(ph)DSEMDTSSLER ddPTM_A459_MK2206_30min_R1 2 AQSNGSGNGSDSEMDTSSLER 21 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 AQSNGSGNGS(0.992)DS(0.008)EMDTSSLER;AQSNGSGNGS(1)DSEMDTSSLER 354.05 8.86E-196 16600900 1937.4 1752.29 2115.6 1742.05 1895.6 1621.89 1882.97 1706.03 1706.15 1698.48 TRUE FALSE 1772.613956 1638.215603 1971.998966 1876.222993 1820.094238 1713.72001 1757.360507 1691.11436 1883.510398 1908.900525 0.928604677 0.858198518 1.033054861 0.98288149 0.953477782 0.897752391 0.920613978 0.885910155 0.986699083 1 10.89852621 -8.453355909 8.601127518 0.999975259 0.934286 0.212329613 0.047084361 0.524617021 59.1313201 0.047969868 0.012395401 3.52E-09 8.453355909 -0.065689259 AQSNGSGNGS(ph)DSEMDTSSLER ddPTM_A459_MK2206_30min_R2 5 AQSNGSGNGSDSEMDTSSLER 21 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 AQSNGSGNGS(0.708)DS(0.292)EMDTSSLER;AQSNGSGNGS(0.503)DS(0.497)EMDTSSLER;AQSNGSGNGS(0.604)DS(0.395)EMDTSSLER;AQSNGSGNGS(0.917)DS(0.083)EMDTSSLER;AQS(0.001)NGS(0.086)GNGS(0.87)DS(0.042)EMDTSSLER 271.38 4.97E-60 75976300 157531 187592 163051 205727 191532 208166 198861 144944 190921 193478 TRUE FALSE 169591.6945 178276.4541 168487.039 188918.446 184011.4913 216087.903 172750.3118 163888.6785 207526.9635 187164.8287 0.906108779 0.952510444 0.900206733 1.009369374 0.983152084 1.154532636 0.922984906 0.875638225 1.108792527 1 17.51394983 -5.769056084 24.91488017 1.00415489 0.92289883 0.215941132 0.076698671 276.1841198 903424.0552 0.022013445 0.033371077 1.70E-06 5.769056084 -0.08125606 AQSPSYVISTGVS(ph)PSR ddPTM_A459_MK2206_30min_R1 1 AQSPSYVISTGVSPSR 16 0 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 AQSPSYVIS(0.001)T(0.009)GVS(0.986)PS(0.005)R 137.85 0.00040621 9054700 1885.9 1572.2 1786.5 1159.9 1686.7 2035.9 2121.5 1927.6 1516.3 1462.1 TRUE FALSE 1725.494302 1469.849494 1665.237357 1249.235699 1619.515167 2151.170899 1979.978606 1910.747196 1673.924811 1643.235986 1.050058735 0.894484728 1.013389051 0.760229029 0.985564569 1.309106493 1.204926512 1.16279537 1.018675848 1 10.68232397 -6.560736353 11.79679841 1.152830335 0.925516613 0.453993355 0.109592825 0.652016985 201.2859724 0.035743351 0.035765309 2.75E-07 6.560736353 -0.227313722 AQSPSYVISTGVS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 AQSPSYVISTGVSPSR 16 0 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 AQSPSYVISTGVS(0.988)PS(0.012)R;AQSPSYVIST(0.001)GVS(0.987)PS(0.012)R 233.57 1.26E-15 24330000 35531 33268 31417 40592 43633 41896 47003 35303 40183 42112 TRUE FALSE 38251.28068 31615.9595 32464.4271 37275.50375 41919.74918 43490.38164 40831.44964 39917.22331 43678.04471 40737.88889 0.938960798 0.776082422 0.796909903 0.915008234 1.029011329 1.067565915 1.002296652 0.97985498 1.072172513 1 15.3140836 -6.066765685 3.208144 1.024894766 0.832247305 0.754159829 0.048464191 0.118983169 2.40181847 0.014799011 0.020711464 8.58E-07 6.066765685 -0.192647461 AQSPVS(ph)GPNVAHLTDGATLNDR ddPTM_A459_MK2206_30min_R2 1 AQSPVSGPNVAHLTDGATLNDR 22 0 Q5THJ4-2;Q5THJ4 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 AQS(0.062)PVS(0.937)GPNVAHLTDGATLNDR 128.71 2.67E-05 3401600 3345.3 7660.5 6157.2 7052.5 8496.3 9437.1 7038.2 4349.1 7004.1 5374.5 TRUE FALSE 3601.41874 7280.090709 6362.477975 6476.28819 8162.692572 9796.235453 6114.075886 4917.542303 7613.303957 5199.130505 0.692696353 1.400251581 1.223758082 1.245648322 1.570011094 1.884206493 1.17598046 0.945839366 1.464341768 1 12.34405465 -4.757997318 24.96656856 1.336736127 0.692695437 0.34134508 0.262212396 117.4783845 851979.4193 0.068550246 0.485574029 1.75E-05 4.757997318 -0.64404069 AQSS(ph)PAAPASLSAPEPASQAR ddPTM_A459_MK2206_30min_R1 1 AQSSPAAPASLSAPEPASQAR 21 0 J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;Q8WUI4-10;H0YI15 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 AQS(0.337)S(0.579)PAAPAS(0.064)LS(0.019)APEPASQAR 98.804 0.00031906 55565000 2603.1 2301.4 2363.7 1672.9 2414 2064.3 2165.8 2234.6 2196.1 1791.8 TRUE FALSE 2381.692676 2151.578442 2203.25863 1801.747048 2317.845268 2181.178882 2021.323434 2215.063128 2424.392454 2013.781711 1.182696547 1.068426846 1.094090098 0.894708219 1.150991319 1.083125778 1.003745055 1.099951954 1.203900324 1 10.97569159 -7.98920049 24.89595639 1.118608836 1.065299671 0.021453122 0.087472642 579.7040418 1336384.355 0.046777111 0.022439901 1.03E-08 7.98920049 -0.053309165 AQST(ph)DSLGTSGSLQSK ddPTM_A459_MK2206_30min_R2 2 AQSTDSLGTSGSLQSK 16 0 Q15276-2;Q15276;I3L456 Q15276-2 RABEP1 Rab GTPase-binding effector protein 1 1 AQS(0.012)T(0.517)DS(0.327)LGT(0.096)S(0.048)GSLQSK;AQS(0.089)T(0.885)DS(0.026)LGTSGSLQSK 253.34 2.42E-29 43785000 136712 127777 146357 157681 120399 120902 148286 133750 107139 148232 TRUE FALSE 147178.7758 121431.78 151236.4693 144797.9579 115671.5303 125503.0103 128815.8701 151231.5842 116457.7566 143395.202 1.026385638 0.846832937 1.054682913 1.009782447 0.806662487 0.875224614 0.898327617 1.054648846 0.81214542 1 17.12963723 AQSTDS(ph)LGTSGSLQSK ddPTM_A459_MK2206_30min_R2 2 AQSTDSLGTSGSLQSK 16 0 Q15276-2;Q15276;I3L456 Q15276-2 RABEP1 Rab GTPase-binding effector protein 1 1 AQS(0.002)T(0.007)DS(0.988)LGT(0.002)S(0.001)GSLQSK;AQS(0.018)T(0.064)DS(0.557)LGT(0.171)S(0.171)GS(0.018)LQS(0.001)K 105.5 0.0036568 25687000 85519 93220 77666 86006 78617 65418 86553 60988 62972 82136 TRUE FALSE 92066.40039 88590.83035 80255.34568 78979.03468 75530.10156 67907.52783 75188.48713 68959.341 68449.19073 79455.90905 1.158710554 1.114968432 1.010061387 0.993998252 0.950591372 0.854656735 0.94629195 0.867894431 0.861473886 1 16.27786689 -5.365975189 0.809272638 0.899050744 1.212063311 0.797828146 0.04401162 0.511052266 0.446753473 0.017847605 0.123948473 4.31E-06 5.365975189 0.313012566 AQT(ph)LPTSVVTITSESSPGK ddPTM_A459_MK2206_30min_R2 2 AQTLPTSVVTITSESSPGK 19 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 AQT(0.977)LPT(0.021)S(0.001)VVTITSESSPGK;AQT(0.995)LPT(0.005)SVVTITSESSPGK 204.51 1.56E-15 34334600 773160 396110 268846 263006 243431 224820 295240 236995 215639 264570 TRUE FALSE 832353.7241 376439.7534 277809.1915 241517.5685 233872.6758 233375.6826 256474.6334 267971.0602 234394.8904 255937.1026 3.252180773 1.470829159 1.085458844 0.943659853 0.913789652 0.911847795 1.002100246 1.047019199 0.915830054 1 17.96542978 -4.624914687 1.889671194 0.967297161 4.736007355 0.992905254 0.057637409 0.108092451 0.287888485 0.017405586 0.825592673 2.37E-05 4.624914687 3.768710194 up AQT(ph)LPTSVVTITSESSPGKR ddPTM_A459_MK2206_30min_R1 1 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 AQT(0.544)LPT(0.344)S(0.111)VVTITSESSPGKR 171.32 1.93E-09 392210000 5728.1 3309.9 2639.8 2650.3 2087.3 2278.1 2471.2 2702.1 2060.1 1663.6 TRUE FALSE 5240.895016 3094.424908 2460.617731 2854.426565 2004.158421 2407.084053 2306.350757 2678.475825 2274.254767 1869.699328 2.803068353 1.655038788 1.316049963 1.526676789 1.071914822 1.287417724 1.233540989 1.432570352 1.216374598 1 10.86859057 -3.975669375 1.184002538 1.256950264 9.762551955 0.913179298 0.143448021 2.223354977 0.646458893 0.041272722 36.94262405 0.000105762 3.975669375 8.505601691 up AQT(ph)PENKPGHMEQDEDSCTAQPELAK ddPTM_A459_MK2206_30min_R2 1 AQTPENKPGHMEQDEDSCTAQPELAK 26 1 F5H527;Q76I76;A0A3B3IS79 F5H527 SSH2 Protein phosphatase Slingshot homolog 2 1 AQT(0.987)PENKPGHMEQDEDS(0.006)CT(0.006)AQPELAK 54.235 0.0068724 8637900 15266 20387 18932 16518 19428 16010 20935 18328 16118 22803 TRUE FALSE 16434.7767 19374.61123 19563.18343 15168.42656 18665.1591 16619.27177 18186.20935 20723.53253 17519.91451 22058.93998 0.745039277 0.878311072 0.886859634 0.687631707 0.846149412 0.75340301 0.824437138 0.939461849 0.794231932 1 14.42907584 -9.297948986 0.50017588 1.013160193 0.8039799 0.387226455 0.07048049 3.174212653 1.168165323 0.166601446 0.036091032 5.04E-10 9.297948986 -0.209180293 AQT(ph)PHEDGGPQPHR ddPTM_A459_MK2206_30min_R1 2 AQTPHEDGGPQPHR 14 0 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 AQT(1)PHEDGGPQPHR;AQT(1)PHEDGGPQPHR 96.435 0.015996 7123000 1730.42 1811.89 2015.77 1844.34 1767.66 1847.08 2228.4 1619.5 1828.86 2576.7 TRUE FALSE 1583.238692 1693.935632 1878.945149 1986.391386 1697.250359 1951.660073 2079.747502 1605.340882 2018.976542 2895.921049 0.546713348 0.584938471 0.648824715 0.685927328 0.586083091 0.673934144 0.718164434 0.554345528 0.697179415 1 11.49980656 -14.52287875 0.266058574 3.453519418 0.606599045 0.806639088 0.054838823 87.89120623 0.85663585 118.2186979 0.070988621 3.00E-15 14.52287875 -2.846920373 AQT(ph)PHEDGGPQPHR ddPTM_A459_MK2206_30min_R2 1 AQTPHEDGGPQPHR 14 0 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 AQT(1)PHEDGGPQPHR 86.262 0.031931 9301700 11814 11374 11181 15041 9667.5 10890 12267 10162 10915 12582 TRUE FALSE 12718.48892 10809.1837 11553.76896 13812.10219 9287.905375 11304.42658 10656.32816 11490.20829 11864.36697 12171.45037 1.044944402 0.888076882 0.949251618 1.134795096 0.76308945 0.928765779 0.875518352 0.944029507 0.974770188 1 13.57121347 -4.744058623 24.06629397 0.936573144 1.04494493 0.108183334 0.090126241 1553.934286 2151471.499 0.022196335 0.613900645 1.80E-05 4.744058623 0.108371786 AQT(ph)PPGPS(ph)LSGSKSPCPQEK ddPTM_A459_MK2206_30min_R1 2 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AQT(0.998)PPGPS(0.912)LS(0.038)GS(0.038)KS(0.013)PCPQEK;AQT(0.998)PPGPS(0.812)LS(0.048)GS(0.087)KS(0.055)PCPQEK 70.555 0.036435 65905000 10989.9 12291.6 11928.5 10698 8756.7 7982 10225.5 9857.1 10146.5 9737.1 TRUE FALSE 10055.15129 11491.41461 11118.82665 11521.96181 8407.902096 8433.933942 9543.375552 9770.920414 11201.26498 10943.40546 0.918832016 1.050076656 1.016029854 1.052868036 0.768307647 0.770686417 0.872066341 0.892859216 1.023563006 1 13.41777414 -6.242499883 24.78719714 0.875902985 1.012823306 0.324233445 0.084846402 838.7623367 1097735.582 0.026040865 0.033556291 5.72E-07 6.242499883 0.136920321 AQT(ph)PPGPS(ph)LSGSKSPCPQEK ddPTM_A459_MK2206_30min_R2 1 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AQT(0.999)PPGPS(0.537)LS(0.377)GS(0.039)KS(0.047)PCPQEK 71.071 0.034382 355340000 100330 131690 130110 103710 124990 67767 133770 102380 84542 124610 TRUE FALSE 108011.3419 125150.4661 134447.8025 95236.56125 120082.2646 70345.92067 116205.8383 115761.4175 91895.31034 120543.9859 0.896032607 1.038214102 1.115342267 0.790056514 0.996169686 0.583570554 0.964011912 0.960325118 0.762338408 1 16.87920015 -5.767077512 24.99971424 0.861395577 1.018698106 0.21557331 0.132116839 196.995772 873491.9372 0.036153098 0.055327419 1.71E-06 5.767077512 0.157302529 AQT(ph)PPGPSLSGSK ddPTM_A459_MK2206_30min_R1 3 AQTPPGPSLSGSK 13 0 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQT(0.995)PPGPS(0.004)LS(0.001)GSK;AQT(1)PPGPSLSGSK;AQT(0.918)PPGPS(0.077)LS(0.005)GSK 132.31 0.0033588 212947000 19827.7 21823.7 20894.6 17736.6 18782.5 15758.4 21499.2 19026.5 23479.4 26257 TRUE FALSE 18141.25 20402.97316 19476.33277 19102.67601 18034.35325 16650.62699 20065.0276 18860.15332 25920.16765 29509.91539 0.614751 0.691393821 0.659992837 0.647330762 0.611128599 0.564238385 0.679941888 0.639112416 0.878354523 1 14.84891216 -8.399041527 2.649691926 0.998718702 0.637279811 0.923580612 0.035395887 0.065633932 0.90296237 0.035393855 0.009675287 3.99E-09 8.399041527 -0.361438891 AQT(ph)PPGPSLSGSK ddPTM_A459_MK2206_30min_R2 1 AQTPPGPSLSGSK 13 0 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQT(1)PPGPSLSGSK 115.09 0.0095213 75902000 34366 26150 29064 29002 24796 22120 28123 20952 20361 32038 TRUE FALSE 36997.08738 24851.42903 30032.97925 26632.44383 23822.38445 22961.7921 24430.41632 23690.49834 22131.96298 30992.60268 1.193739285 0.801850341 0.969037017 0.859316144 0.768647432 0.740879762 0.788266044 0.764392025 0.714104691 1 14.91963629 -1.522878748 0.889445144 0.795921603 169.9752063 0.558599842 0.094976031 606.1051947 1.411914565 0.030886056 208003.404 0.03 1.522878748 169.1792847 AQT(ph)PPISSLPTSPSDEVGR ddPTM_A459_MK2206_30min_R1 1 AQTPPISSLPTSPSDEVGR 19 0 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 AQT(0.99)PPIS(0.008)S(0.002)LPTSPSDEVGR 136.61 0.00040403 10289000 3228.9 3301 3578 2764.6 3496.7 3244.8 3986.3 3408.9 4103.8 4263.8 TRUE FALSE 2954.265099 3086.1043 3335.135329 2977.529971 3357.419035 3428.517772 3720.3812 3379.096347 4530.404696 4792.031734 0.616495312 0.644007484 0.695975218 0.62135022 0.700625376 0.715462243 0.776368231 0.705148992 0.945403734 1 12.22642175 -8.222103992 0.609364766 1.012731713 0.646193604 0.861797657 0.046271408 0.251680001 0.219075188 0.044400878 0.020947073 6.00E-09 8.222103992 -0.366538109 AQTAPTKT(ph)SPR ddPTM_A459_MK2206_30min_R1 1 AQTAPTKTSPR 11 1 Q14669;Q14669-2;Q14669-3;Q14669-4 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 AQTAPT(0.001)KT(0.499)S(0.499)PR 137.09 0.014111 16717000 3380.7 3073.7 3073.9 2867.8 3042.6 2820.5 2785.7 2645.6 1294.1 1551.2 TRUE FALSE 3093.153712 2873.601571 2865.252232 3088.678453 2921.406799 2980.194273 2599.871036 2622.469798 1428.626326 1743.374367 1.774233791 1.648298625 1.643509442 1.771666781 1.675719716 1.709440226 1.491286717 1.504249373 0.81946044 1 10.76766669 -8.110638633 2.388031978 0.898495919 1.679140831 0.908669782 0.094578435 0.080162012 0.820412661 0.079741809 0.025110374 7.75E-09 8.110638633 0.780644912 AQTLPT(ph)SVVTITSESS(ph)PGKR ddPTM_A459_MK2206_30min_R1 1 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 2 AQT(0.153)LPT(0.764)S(0.083)VVT(0.005)IT(0.016)S(0.04)ES(0.298)S(0.641)PGKR 106.06 0.00070084 10796000 10917 5717.9 4192.7 3252.7 3235.6 2748.6 3034.7 3538.8 3553.8 3164 TRUE FALSE 9988.451823 5345.663671 3908.111206 3503.223518 3106.719201 2904.223357 2832.2607 3507.860645 3923.230227 3555.980207 2.808916597 1.503288365 1.099025016 0.985163953 0.873660431 0.816715276 0.796478196 0.986467989 1.103276734 1 11.79603158 -4.386856714 1.2710428 0.920467651 5.646479646 0.974443026 0.091110143 0.502330151 0.362168952 0.029373536 3.952419975 4.10E-05 4.386856714 4.726011995 up AQTLPT(ph)SVVTITSESSPGKR ddPTM_A459_MK2206_30min_R1 1 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 AQT(0.132)LPT(0.781)S(0.087)VVTITSESSPGKR 144.33 4.21E-05 348890000 4718.6 2855.4 1853.2 1546.6 1830.1 1758.9 1714.4 2118.2 1758.3 1465.3 TRUE FALSE 4317.258292 2669.512941 1727.409947 1665.7194 1757.203242 1858.487398 1600.035504 2099.680801 1941.081577 1646.832426 2.621552881 1.620998529 1.048928792 1.011468668 1.067020064 1.12852247 0.971583677 1.274981453 1.17867583 1 10.68547805 -4.804716478 2.145704366 1.08806358 2.99251324 0.964264227 0.090504805 0.10934638 0.602878216 0.025641343 0.400547405 1.57E-05 4.804716478 1.90444966 up AQTLPTS(ph)VVTITS(ph)ESSPGKR ddPTM_A459_MK2206_30min_R2 1 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 2 AQT(0.331)LPT(0.06)S(0.607)VVT(0.029)IT(0.306)S(0.571)ES(0.052)S(0.044)PGKR 87.468 0.0051954 4221300 68248 35857 20720 24987 24147 17537 25396 15239 21902 20919 TRUE FALSE 73473.11935 34076.39352 21410.79446 22945.48217 23198.86745 18204.38282 22061.47469 17230.78962 23806.99637 20236.41474 3.630737968 1.683914565 1.058032993 1.133870918 1.146392172 0.899585379 1.090186922 0.851474426 1.17644339 1 14.30466609 -4.68828753 2.019865892 1.03700651 4.845006812 0.982833182 0.10279434 0.111529415 0.406563976 0.027369709 0.859828424 2.05E-05 4.68828753 3.808000303 up AQTLPTSVVTITSES(ph)SPGKR ddPTM_A459_MK2206_30min_R2 2 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 AQTLPTSVVTITS(0.026)ES(0.487)S(0.487)PGKR;AQTLPTSVVT(0.002)IT(0.012)S(0.029)ES(0.7)S(0.257)PGKR 157.56 7.41E-07 30043000 91284 85253.5 67340.4 65667.4 70431 60839.4 75730.3 59391.1 65381.9 76891.8 TRUE FALSE 98272.77323 81019.93516 69585.49533 60302.16336 67665.52505 63154.686 65786.82064 67153.72069 71068.69948 74382.82686 1.321175564 1.089229041 0.935504851 0.810700076 0.90969284 0.849049285 0.884435607 0.902812161 0.955444993 1 16.18268196 -4.899621097 1.841517285 0.893963486 1.398736082 0.87023353 0.050322051 0.202282011 0.870825562 0.01369498 0.165012104 1.26E-05 4.899621097 0.504772597 AQTLPTSVVTITSESS(ph)PGKR ddPTM_A459_MK2206_30min_R1 2 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 AQTLPTSVVTIT(0.003)S(0.011)ES(0.412)S(0.573)PGKR;AQTLPTSVVTIT(0.001)SES(0.126)S(0.874)PGKR 251.7 2.21E-38 1612970000 13101.9 12519 13023.6 10346 10123.6 9065.2 10767.4 11018.7 11608.2 10593.4 TRUE FALSE 11987.5146 11704.01082 12139.59432 11142.85071 9720.355575 9578.46379 10049.12639 10922.36467 12814.91393 11905.79037 1.006864243 0.983051982 1.019637835 0.935918605 0.816439335 0.804521455 0.844053698 0.917399377 1.076359782 1 13.53937578 -5.938231825 5.090302868 0.895347613 0.999782593 0.205678599 0.078820457 0.296040269 15.33602875 0.023955701 0.035860547 1.15E-06 5.938231825 0.104434979 AQTLPTSVVTITSESS(ph)PGKR ddPTM_A459_MK2206_30min_R2 4 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 AQTLPTSVVTIT(0.003)S(0.127)ES(0.221)S(0.649)PGKR;AQTLPTSVVTIT(0.001)S(0.006)ES(0.03)S(0.963)PGKR;AQTLPTSVVT(0.001)IT(0.004)S(0.011)ES(0.273)S(0.711)PGKR;AQTLPTSVVTITS(0.015)ES(0.14)S(0.845)PGKR 184.57 2.47E-14 1228718500 253973.6 255484 234636.1 248198 228643 206888.2 274608.5 199001.7 194068.9 259379 TRUE FALSE 273418.0141 242797.0361 242458.7505 227919.4295 219665.327 214761.4754 238552.0741 225011.9055 210948.6621 250915.4845 1.08968171 0.96764469 0.966296484 0.908351391 0.875455444 0.855911607 0.950726794 0.896763729 0.840715999 1 17.93684198 -4.145940234 0.851729124 0.898357869 1.476870637 0.597677059 0.045432932 3.950915145 1.030929325 0.015488928 2.771296945 7.15E-05 4.145940234 0.578512768 AQTPPGPS(ph)LS(ph)GSKSPCPQEK ddPTM_A459_MK2206_30min_R1 1 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AQT(0.152)PPGPS(0.919)LS(0.772)GS(0.009)KS(0.148)PCPQEK 67.895 0.027535 27882000 3658 3990.1 4672 3748.8 3325.3 2395.2 3198.7 3705.8 3139.1 3700.7 TRUE FALSE 3346.867891 3730.343765 4354.877657 4037.533226 3192.84626 2530.814154 2985.320559 3673.400581 3465.420678 4159.170655 0.804695976 0.896896058 1.047054333 0.970754403 0.767664163 0.608490097 0.71776823 0.883205063 0.833199925 1 12.02208017 -4.395319285 9.858576287 0.849177162 4.31E-05 0.011181947 0.127364524 147613.5134 309543.1137 0.035815368 2623161.432 4.02E-05 4.395319285 -0.849134047 AQTPPGPSLS(ph)GSKSPCPQEK ddPTM_A459_MK2206_30min_R2 1 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQTPPGPS(0.049)LS(0.77)GS(0.031)KS(0.15)PCPQEK 84.895 0.0013721 209330000 60291 77915 72837 71274 78172 57731 97032 63244 64203 80328 TRUE FALSE 64906.92532 74045.8544 75265.34923 65450.68621 75102.5745 59927.99366 84291.58184 71510.20795 69787.26089 77706.90394 0.835278746 0.952886432 0.968579951 0.842276334 0.966485224 0.771205525 1.08473736 0.920255528 0.898083148 1 16.24575516 -7.266539607 24.99989738 0.969123624 0.897289301 0.231702501 0.075818906 788.7543302 3866234.451 0.03032683 0.021139431 5.41E-08 7.266539607 -0.071834323 AQTPPGPSLSGSKS(ph)PCPQEK ddPTM_A459_MK2206_30min_R1 2 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQT(0.001)PPGPS(0.038)LS(0.101)GS(0.317)KS(0.543)PCPQEK;AQT(0.002)PPGPS(0.138)LS(0.056)GS(0.265)KS(0.539)PCPQEK 54.943 0.025351 383150000 8740.6 10236 10941.5 9765.1 9369.9 8018.7 8571.1 9170.8 9424.7 8503.8 TRUE FALSE 7997.166071 9569.63454 10198.82146 10517.20969 8996.677042 8472.711864 7999.337558 9090.620662 10404.43129 9557.314944 0.836758663 1.001289023 1.067122045 1.100435609 0.941339392 0.886515921 0.836985869 0.951168892 1.088635391 1 13.22238965 -4.756492581 24.33121859 0.981376385 0.836758345 0.230782006 0.081325182 196.0428782 964093.2719 0.02277646 0.181200278 1.75E-05 4.756492581 -0.14461804 AQTPPGPSLSGSKS(ph)PCPQEK ddPTM_A459_MK2206_30min_R2 1 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQTPPGPS(0.022)LS(0.07)GS(0.388)KS(0.52)PCPQEK 77.231 0.0029522 173490000 41888 52098 47185 46332 46208 34092 52367 43528 37163 47361 TRUE FALSE 45094.97749 49510.88908 48758.12435 42546.52739 44393.64174 35389.39495 45491.15 49217.25905 40395.37056 45815.61445 0.984270931 1.080655355 1.064225045 0.92864688 0.968963142 0.77243087 0.992918038 1.074246404 0.881694397 1 15.48355175 -5.762007684 24.99999425 0.944385729 1.046810949 0.242989711 0.078754378 21.55999254 948509.4187 0.022551121 0.035848238 1.73E-06 5.762007684 0.10242522 AQTPPIS(ph)SLPTSPSDEVGR ddPTM_A459_MK2206_30min_R2 1 AQTPPISSLPTSPSDEVGR 19 0 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 AQT(0.236)PPIS(0.635)S(0.125)LPT(0.003)S(0.001)PSDEVGR 86.944 0.0034645 7272100 20750 22014 25030 25749 26741 25894 31233 22400 21598 28736 TRUE FALSE 22338.63595 20920.81677 25864.48771 23645.22433 25691.01398 26879.41431 27132.06958 25327.75691 23476.555 27798.34667 0.803595847 0.752592124 0.930432591 0.850598225 0.924192157 0.966942913 0.976031773 0.911124579 0.844530622 1 14.76271146 -5.364736672 1.185720307 0.932912795 0.759176557 0.533984728 0.052113713 0.551528302 1.217595766 0.017328025 0.092227359 4.32E-06 5.364736672 -0.173736238 AQTTNSNSSSSSDVS(ph)THS ddPTM_A459_MK2206_30min_R1 1 AQTTNSNSSSSSDVSTHS 18 0 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 AQT(0.023)T(0.001)NS(0.001)NS(0.028)S(0.018)S(0.056)S(0.356)S(0.015)DVS(0.485)T(0.014)HS(0.002) 96.756 0.003681 840810 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(ph)SPER ddPTM_A459_MK2206_30min_R1 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGSSPER 33 0 Q86WR7;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.589)S(0.411)PER 100.71 2.02E-11 79217000 1335.2 1313.3 1362.5 1404.3 1369.4 1720.8 1419.2 1613.9 1250.8 1021.6 TRUE FALSE 1221.634229 1227.803931 1270.017296 1512.459429 1314.853898 1818.230209 1324.527757 1599.789842 1380.825136 1148.163521 1.06398976 1.0693633 1.106129287 1.317285737 1.145179998 1.583598657 1.153605504 1.393346691 1.202638049 1 10.16511241 -5.680340929 5.08379767 1.277505396 1.07239797 0.219056688 0.149893582 0.264325431 11.84242769 0.038695629 0.067788553 2.09E-06 5.680340929 -0.205107426 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(ph)SPER ddPTM_A459_MK2206_30min_R2 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGSSPER 33 0 Q86WR7;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.5)S(0.5)PER 96.515 4.25E-11 34386000 43093 57426 43491 68866 59769 68567 72113 42772 60208 50854 TRUE FALSE 46392.23321 54574.30835 44940.96823 63239.42751 57422.16874 71176.36523 62644.47648 48362.44726 65444.78301 49194.63814 0.943034342 1.109354808 0.913533871 1.285494312 1.167244458 1.446831767 1.273400493 0.983083708 1.330323496 1 15.58621346 -5.765182243 24.99999999 1.22207064 1.000712377 0.340887304 0.141795519 107.0293669 714896.5022 0.039131328 0.060632309 1.72E-06 5.765182243 -0.221358264 AQVLATIHGHAGAFPAAGDAGEGAPGGGSS(ph)PER ddPTM_A459_MK2206_30min_R1 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGSSPER 33 0 Q86WR7;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.465)S(0.535)PER 133.99 1.59E-25 61744000 1259.8 1256.8 1413 831.87 1579 1628 1681 1496.7 933.03 1104 TRUE FALSE 1152.647395 1174.982092 1317.089497 895.9407715 1516.105086 1720.175953 1568.863557 1483.61451 1030.021807 1240.771855 0.928976097 0.946976744 1.061508199 0.72208341 1.221904801 1.386375704 1.264425487 1.195719023 0.830146012 1 10.27702215 -6.28810727 24.94250665 1.177111685 0.927651274 0.323542862 0.163117321 838.8279371 784554.2844 0.052033736 0.059016924 5.15E-07 6.28810727 -0.249460411 AQVLATIHGHAGAFPAAGDAGEGAPGGGSS(ph)PER ddPTM_A459_MK2206_30min_R2 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGSSPER 33 0 Q86WR7;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.263)S(0.737)PER 102.92 8.51E-12 35555000 15796 28164 25444 25833 28561 27876 21917 22777 30155 29102 TRUE FALSE 17005.35391 26765.41671 26292.29026 23722.36126 27439.55163 28936.84071 19039.27157 25754.03211 32777.82739 28152.40412 0.604046242 0.950732896 0.933926998 0.842640691 0.974678806 1.027863929 0.676292919 0.914807559 1.164299406 1 14.78097051 -4.759458117 24.98386993 0.932060658 0.604045822 0.415873011 0.119836575 53.79274327 678154.1564 0.029885065 0.189538274 1.74E-05 4.759458117 -0.328014835 AQVPGPLT(ph)PEMEAR ddPTM_A459_MK2206_30min_R2 2 AQVPGPLTPEMEAR 14 0 Q9H8Y5;B8ZZS4 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 AQVPGPLT(1)PEMEAR;AQVPGPLT(1)PEMEAR 99.796 0.022079 24231000 119508 154783 128117 175122 136504 162085 145977 121429 131169 125599 TRUE FALSE 128657.6244 147096.7013 132388.3568 160813.9724 131144.1671 168253.2583 126810.0446 137300.1872 142577.8425 121500.7149 1.058904258 1.210665315 1.089609694 1.323564001 1.07936951 1.384792331 1.043697929 1.130036044 1.173473281 1 16.89060528 -9.344862244 0.655396208 0.994407859 1.177271666 0.176046373 0.107637433 5.419668855 3.017946087 0.186909572 0.039405775 4.52E-10 9.344862244 0.182863807 AQYDELAR ddPTM_A459_MK2206_30min_R1 3 AQYDELAR 8 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 ;; 180.87 0.0062254 221694000 15297.8 16348 15102.5 13232.9 17583.5 14734 15898.5 14524 13935.3 12307.3 FALSE TRUE 13996.64178 15283.74223 14077.38438 14252.10025 16883.11196 15568.22635 14837.94007 14397.0182 15383.9243 13832.02124 1.011901409 1.104953641 1.017738777 1.030370038 1.220581697 1.125520709 1.072723922 1.040847028 1.112196405 1 13.75572437 -3.499049216 12.85829778 1.07842236 0.738995596 0 0.06502548 0 0 0.015170892 0 0.000316921 3.499049216 -0.339426763 AQYDELAR ddPTM_A459_MK2206_30min_R2 2 AQYDELAR 8 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 ; 167.23 0.0032923 595400000 398370 456880 396520 438010 450680 434040 442870 372800 401350 380050 FALSE TRUE 428869.5135 434192.0036 409739.7789 402223.1819 432984.0387 450557.6963 384720.637 421526.24 436258.6975 367648.9996 1.166518919 1.180996015 1.114486315 1.094041279 1.177710368 1.225510465 1.046434609 1.14654532 1.186617393 1 18.48796953 -11.17367203 2.739454919 0.983749697 1.14712666 0.451317409 0.049178016 11827652.01 11042121.45 1356777.918 0.012838079 6.70E-12 11.17367203 0.163376963 AREES(ph)WGPPR ddPTM_A459_MK2206_30min_R2 4 AREESWGPPR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 AREES(1)WGPPR;AREES(1)WGPPR;AREES(1)WGPPR;AREES(1)WGPPR 87.216 0.018679 54433000 46088.4 50713.2 44858.6 58519 57208.6 56555.3 57655.5 41083 53759.4 51760.9 TRUE FALSE 49616.96334 48194.85623 46354.16333 53737.81051 54962.30291 58707.55157 50085.26359 46452.68916 58435.29544 50071.94607 0.99091342 0.962512145 0.925751183 1.073211942 1.097666602 1.172463948 1.000265968 0.927718869 1.167026649 1 15.61171491 -5.769715153 24.9991929 1.063049067 0.960004236 0.297691559 0.072422872 231.4349849 699112.4196 0.021106024 0.031910587 1.70E-06 5.769715153 -0.103044831 ARFEELCSDLFR ddPTM_A459_MK2206_30min_R1 2 ARFEELCSDLFR 12 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;P17066;P48741 A0A0G2JIW1;P17066 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 ; 135.02 0.0042976 163220000 8560.6 7724.2 8423.3 7731.2 8888.9 8137.8 8079 7861.2 7221.5 6041.4 FALSE TRUE 7832.476016 7221.353176 7851.549865 8326.658364 8534.83629 8598.555203 7540.064651 7792.470357 7972.200767 6789.854242 1.15355584 1.063550544 1.156365009 1.226338308 1.256998455 1.266382885 1.110489914 1.147663864 1.174134301 1 12.72916489 -9.58730528 0.822176167 0.995627716 1.176784361 0.429854811 0.059784484 7.618713062 4.87987898 0.177095835 0.022512362 2.59E-10 9.58730528 0.181156645 ARFEELNADLFR ddPTM_A459_MK2206_30min_R1 2 ARFEELNADLFR 12 1 P11142;E9PKE3;P11142-2;E9PN89;E9PNE6;A8K7Q2;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 177.16 0.00029201 320750000 9779 10194.8 11093.5 9940.5 11576.1 11028.9 11104.9 10203.4 8955 7054.9 FALSE TRUE 8947.244698 9531.116667 10340.50413 10706.11903 11114.99942 11653.34679 10364.11238 10114.19275 9885.904296 7928.914274 1.128432518 1.202070843 1.304151334 1.350262932 1.401831202 1.469727933 1.307128823 1.275608791 1.246816898 1 12.95290761 -8.852663721 1.449262608 1.000384141 1.313648872 0.506453484 0.090067034 1.139631194 3.733906707 0.097198141 0.028387333 1.40E-09 8.852663721 0.313264731 ARFEELNADLFR ddPTM_A459_MK2206_30min_R2 2 ARFEELNADLFR 12 1 P11142;E9PKE3;P11142-2;E9PN89;E9PNE6;A8K7Q2;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 169.09 0.0010196 24527000 50733 67033 65066 81665 76935 81123 70729 60460 71446 68797 FALSE TRUE 54617.15749 63704.2387 67235.26797 74992.70827 73914.14533 84210.19261 61442.19734 68362.32959 77660.24394 66552.15952 0.820666946 0.957207687 1.010264257 1.126826068 1.110619788 1.265326223 0.923218687 1.027199269 1.166907948 1 16.02219786 -4.971617021 1.441335807 1.089687449 0.772843216 0.461969771 0.090028395 0.774327893 1.920682883 0.027109044 0.321296208 1.07E-05 4.971617021 -0.316844233 ARGPEEEEIGSPEPMAAPASAS(ph)QKLSPLQK ddPTM_A459_MK2206_30min_R2 1 ARGPEEEEIGSPEPMAAPASASQKLSPLQK 30 2 H3BRB3;Q14807-2;Q14807 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 ARGPEEEEIGSPEPMAAPAS(0.141)AS(0.43)QKLS(0.43)PLQK 57.673 0.0015814 5478700 10966 17084 15378 15101 18732 16846 14091 11705 14865 13362 TRUE FALSE 11805.56539 16235.6334 15890.69484 13867.19999 17996.48756 17487.08633 12240.83477 13234.88369 16157.93083 12925.99903 0.913319377 1.256044764 1.229359124 1.072814562 1.392270533 1.352861492 0.946993323 1.023896385 1.250033424 1 13.65798817 -7.269243142 24.97207564 1.057222158 1.209113571 0.193568257 0.147175259 1040.074587 3328227.54 0.061905326 0.042611322 5.38E-08 7.269243142 0.151891413 ARGPGGS(ph)PGGLQK ddPTM_A459_MK2206_30min_R1 5 ARGPGGSPGGLQK 13 1 Q96A00-2;Q96A00;K7EJB8;K7EMN0 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 ARGPGGS(1)PGGLQK;ARGPGGS(1)PGGLQK;ARGPGGS(1)PGGLQK;ARGPGGS(1)PGGLQK;ARGPGGS(1)PGGLQK 144.15 0.00037647 103292500 18620.48 18413.8 18095.31 19570.07 22998 17301.12 18339.84 24060.1 12017.06 7839.05 TRUE FALSE 17036.7104 17215.05827 16867.05077 21077.36018 22081.94096 18280.69446 17116.42274 23849.74508 13266.27639 8810.210696 1.93374608 1.953989396 1.914488922 2.392378674 2.506403277 2.074944073 1.942793802 2.707057289 1.505784237 1 13.10496081 -8.503888748 6.277159297 1.000477842 2.167098453 0.687256435 0.260919108 0.079429654 13.43448971 0.257827741 0.066788523 3.13E-09 8.503888748 1.166620612 ARGPGGS(ph)PGGLQK ddPTM_A459_MK2206_30min_R2 4 ARGPGGSPGGLQK 13 1 Q96A00-2;Q96A00;K7EJB8;K7EMN0 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 ARGPGGS(1)PGGLQK;ARGPGGS(1)PGGLQK;ARGPGGS(1)PGGLQK;ARGPGGS(1)PGGLQK 112.03 0.023966 82149700 114264 211319 163776 206933 220796 206831 210156 154285 223830 173813 TRUE FALSE 123012.1397 200825.2057 169236.2101 190025.912 212126.4396 214702.0986 182562.2648 174450.5792 243298.3288 168141.496 0.731598937 1.194382175 1.006510672 1.130154759 1.261594815 1.276913217 1.085765674 1.037522464 1.446985631 1 17.35931629 -4.758638328 24.99188368 1.15993595 0.73159836 0.481159355 0.133451988 66.2239008 590759.4869 0.032378873 0.217910349 1.74E-05 4.758638328 -0.428337591 ARGQGS(ph)SPVAMQK ddPTM_A459_MK2206_30min_R2 1 ARGQGSSPVAMQK 13 1 P18206;P18206-2 P18206 VCL Vinculin 1 ARGQGS(0.7)S(0.3)PVAMQK 67.605 0.038164 4010900 17667 32387 20189 30763 36660 26013 30596 25350 32528 25465 TRUE FALSE 19019.5991 30778.70868 20862.09118 28249.56449 35220.5442 27002.94294 26578.70845 28663.33204 35357.22664 24634.07914 0.772084842 1.249436137 0.846879279 1.146767628 1.429748764 1.09616206 1.078940613 1.163564178 1.435297274 1 14.58836792 -3.920500148 0.711612603 1.191084135 6.82E-10 0.263963792 0.177278033 13.15421939 2.050144182 0.070613203 16.722819 0.000120088 3.920500148 -1.191084134 ARGS(ph)PPTSSNIVQGQIK ddPTM_A459_MK2206_30min_R2 4 ARGSPPTSSNIVQGQIK 17 1 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 ARGS(0.998)PPT(0.001)SSNIVQGQIK;ARGS(1)PPTSSNIVQGQIK;ARGS(0.987)PPT(0.013)S(0.001)SNIVQGQIK;ARGS(0.999)PPT(0.001)SSNIVQGQIK 151.64 0.00011276 30272800 263751 322954.6 276733 326245.3 310205.4 314971 319296 253109.6 265303.6 283111 TRUE FALSE 283943.9794 306917.1442 285959.1401 299590.0154 298025.1773 326957.4421 277372.0517 286191.8938 288379.2276 273873.1113 1.036772022 1.120654535 1.044130031 1.0939008 1.088187066 1.193828195 1.012775772 1.04497989 1.052966559 1 18.0631481 ARHDS(ph)PDLAPNVTYSLPR ddPTM_A459_MK2206_30min_R1 4 ARHDSPDLAPNVTYSLPR 18 1 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR 106.69 0.00090357 60358800 6419.84 6290.94 6598.29 6280.47 6619.81 6564.14 7009.44 6585.88 5567.44 5377.07 TRUE FALSE 5873.798896 5881.398663 6150.416459 6764.192888 6356.12895 6935.795934 6541.853047 6528.300346 6146.195311 6043.222026 0.971964768 0.973222337 1.01773796 1.119302395 1.051778161 1.147698348 1.08251079 1.080268161 1.017039467 1 12.56110223 -5.541867754 4.577219836 1.07738297 0.976332586 0.477347645 0.041396247 0.146787783 7.689729105 0.011055121 0.021001281 2.87E-06 5.541867754 -0.101050384 ARHDS(ph)PDLAPNVTYSLPR ddPTM_A459_MK2206_30min_R2 3 ARHDSPDLAPNVTYSLPR 18 1 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR 92.551 0.0027215 88078100 32669.5 63262.4 48697.2 60852.3 55441 58136.4 51253.3 45435.5 49131.5 57100.8 TRUE FALSE 35170.70204 60120.88121 50320.74034 55880.47243 53264.10777 60348.82144 44523.68014 51374.07585 53404.86906 55237.60557 0.636716629 1.088404912 0.910986996 1.01163821 0.964272568 1.092531452 0.806039286 0.93005617 0.966820855 1 15.75336316 -4.748471513 24.99996548 0.969617996 0.636715838 0.616683856 0.079814772 430.7017922 830274.8886 0.019475011 0.356094181 1.78E-05 4.748471513 -0.332902158 ARLS(ph)PVTPSESLPRPR ddPTM_A459_MK2206_30min_R2 2 ARLSPVTPSESLPRPR 16 2 K7EQZ1;A0A669KB29 K7EQZ1 CXXC1 1 ARLS(0.97)PVT(0.03)PSESLPRPR;ARLS(0.5)PVT(0.5)PS(0.001)ESLPRPR 79.885 0.0093877 8339900 10120.1 17439.4 16329.1 15343.3 16186.3 12418.5 16391.3 11339.9 16172.8 16623.9 TRUE FALSE 10894.90264 16573.38476 16873.50404 14089.70331 15550.74453 12891.09472 14239.10262 12822.06387 17579.48091 16081.4635 0.677482036 1.030589334 1.04925177 0.876145589 0.966998092 0.801612037 0.885435745 0.797319464 1.093151808 1 13.97311109 -8.27383261 24.93115267 1.046575918 0.895484491 0.256680939 0.10853524 1243.348886 2501186.912 0.101413854 0.026937182 5.32E-09 8.27383261 -0.151091427 ARNS(ph)GTQSDGEEKQPGLVMER ddPTM_A459_MK2206_30min_R2 1 ARNSGTQSDGEEKQPGLVMER 21 2 J3QRV5;Q6P1M3;Q6P1M3-2 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 ARNS(0.916)GT(0.072)QS(0.012)DGEEKQPGLVMER 41.912 0.047131 6650700 15078 20296 22914 21423 19078 18614 18863 16717 26373 21095 TRUE FALSE 16232.38327 19288.13015 23677.94132 19672.67237 18328.90186 19322.36881 16386.26544 18901.9693 28666.87587 20406.67188 0.79544491 0.94518745 1.160303918 0.964031396 0.898181829 0.946865267 0.802985687 0.926264185 1.404779576 1 14.31675329 -8.228759998 24.38780898 1.202389809 0.934511605 0.408072817 0.131175428 404.1782763 301629.1152 0.087654296 0.033124017 5.91E-09 8.228759998 -0.267878204 ARPATDS(ph)FDDYPPR ddPTM_A459_MK2206_30min_R1 1 ARPATDSFDDYPPR 14 1 E7EX17;P23588;P23588-2;F8VP89;F8W0K0;F8VSC7 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 ARPAT(0.001)DS(0.999)FDDYPPR 106.31 0.0030594 5956000 1059.3 1086.8 1042 1301.3 1477.6 1453.2 1132.6 1292.9 942.39 814.44 TRUE FALSE 969.2009724 1016.049122 971.2719432 1401.526351 1418.744063 1535.478928 1057.046321 1281.596312 1040.354813 915.3389759 1.05884377 1.110024973 1.061106288 1.531155548 1.549965751 1.677497592 1.154814062 1.400133006 1.136578732 1 9.838162303 -5.745034503 24.89264876 1.380535184 1.079994852 0.274749738 0.19923398 282.4347275 428560.9318 0.054698621 0.094381364 1.80E-06 5.745034503 -0.300540332 ARPATDS(ph)FDDYPPR ddPTM_A459_MK2206_30min_R2 6 ARPATDSFDDYPPR 14 1 E7EX17;P23588;P23588-2;F8VP89;F8W0K0;F8VSC7 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 ARPAT(0.059)DS(0.941)FDDYPPR;ARPAT(0.001)DS(0.999)FDDYPPR;ARPAT(0.002)DS(0.998)FDDYPPR;ARPATDS(1)FDDYPPR;ARPATDS(0.998)FDDY(0.001)PPR;ARPATDS(1)FDDYPPR 131.61 0.0031966 10790900 78135.4 98811.6 69926.8 94321.9 92544.3 92969 112876.6 90257.8 95979.6 69430.5 TRUE FALSE 84117.5063 93904.75963 72258.12461 86615.49905 88910.54578 96507.00044 98055.76683 102054.8044 104327.7321 67164.98847 1.252401113 1.398120684 1.075830224 1.289593001 1.323763285 1.436864692 1.459923824 1.519464332 1.553305293 1 16.03542177 -6.543399965 2.515018061 1.430922579 1.252112763 0.121902541 0.162275159 0.465312921 5.946629857 0.055192161 0.058350462 2.86E-07 6.543399965 -0.178809816 ARPEDVISEGR ddPTM_A459_MK2206_30min_R1 1 ARPEDVISEGR 11 1 P25325-2;P25325 P25325-2 MPST 3-mercaptopyruvate sulfurtransferase 0 117.79 0.015488 3642600 1833.4 1522.4 1652.3 1315.1 2039.7 1713.8 1776.3 1574.7 1480.3 1503.3 FALSE TRUE 1677.459702 1423.291483 1540.14648 1416.38923 1958.45443 1810.833875 1657.806268 1560.932564 1634.182482 1689.540153 0.992849859 0.842413529 0.911577317 0.838328244 1.159164182 1.071790967 0.981217442 0.923880123 0.967235066 1 10.72241492 -6.228273418 24.9998546 1.014337662 0.893535549 0.403179843 0.071992718 719.7358848 542522.8769 0.022671423 0.029266743 5.91E-07 6.228273418 -0.120802113 ARPFPDGLAEDIDKGEVSAR ddPTM_A459_MK2206_30min_R2 2 ARPFPDGLAEDIDKGEVSAR 20 2 P13639 P13639 EEF2 Elongation factor 2 0 ; 127.49 0.00012764 22473000 88489 111306 97970 103554 108041 104779 120246 94123 99073 116631 FALSE TRUE 95263.78588 105778.7059 101236.2709 95093.30695 103798.7675 108766.4383 104457.5558 106425.1993 107690.1905 112825.34 0.84434743 0.93754387 0.8972831 0.842836431 0.919995166 0.96402491 0.925834176 0.943273907 0.954485849 1 16.7837316 -6.52101387 6.215076765 0.951209079 0.885107986 0.572966823 0.031008734 0.124398917 21.15382487 0.009927926 0.010453845 3.01E-07 6.52101387 -0.066101092 ARPS(ph)SPSTSWHR ddPTM_A459_MK2206_30min_R2 2 ARPSSPSTSWHR 12 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3;H0YF21 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 ARPS(0.82)S(0.129)PS(0.019)T(0.027)S(0.006)WHR;ARPS(0.531)S(0.36)PS(0.083)T(0.02)S(0.007)WHR 68.972 0.037215 6171700 11683.9 16275.9 15677.4 17105.7 16074.9 16357.6 18952.9 19028.7 15127.2 13934.9 TRUE FALSE 12578.42837 15467.66247 16200.07669 15708.10959 15443.71866 16980.09993 16464.36146 21515.81643 16442.93651 13480.20535 0.933103617 1.147435226 1.201767797 1.165272277 1.145659005 1.259632141 1.221373194 1.5961045 1.21978383 1 13.71855485 -3.556360425 0.522908596 1.27898399 2.75E-17 0.259585325 0.143535312 17.91426456 1.392048506 0.078411575 18.55687407 0.000277741 3.556360425 -1.27898399 ARPSQFPEQSSSAQQNGSVS(ph)DISPVQAAK ddPTM_A459_MK2206_30min_R2 1 ARPSQFPEQSSSAQQNGSVSDISPVQAAK 29 1 O00139-1;O00139-5;O00139;O00139-4 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ARPSQFPEQSSSAQQNGS(0.413)VS(0.429)DIS(0.158)PVQAAK 137.58 3.43E-14 12931000 39263 46104 42850 46050 50448 43274 55640 39799 37777 39985 TRUE FALSE 42269.00547 43814.5424 44278.59761 42287.56769 48467.15804 44920.82239 48334.40116 45000.86595 41062.77517 38680.29272 1.092778841 1.132735543 1.144732744 1.09325873 1.253019422 1.161336154 1.249587264 1.163405517 1.06159422 1 15.23931109 -8.422346783 3.122278468 1.002285712 1.163630228 0.519489405 0.051779348 0.192487126 3.584712297 0.051915047 0.013902627 3.78E-09 8.422346783 0.161344515 ARPSQFPEQSSSAQQNGSVSDIS(ph)PVQAAK ddPTM_A459_MK2206_30min_R1 2 ARPSQFPEQSSSAQQNGSVSDISPVQAAK 29 1 O00139-1;O00139-5;O00139;O00139-4 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ARPSQFPEQSSSAQQNGS(0.181)VS(0.198)DIS(0.621)PVQAAK;ARPSQFPEQSSSAQQNGS(0.083)VS(0.305)DIS(0.612)PVQAAK 121.91 7.42E-14 14071300 1471.24 1711.2 1711.65 1367.01 1583.98 1526.05 1944.81 1339.59 1358.97 1355.34 TRUE FALSE 1346.103312 1599.800569 1595.467967 1472.297347 1520.886722 1612.453632 1815.075273 1327.878106 1500.239795 1523.249751 0.883704928 1.050254935 1.04741062 0.966550197 0.998448692 1.058561559 1.191580876 0.871740241 0.984894167 1 10.57293679 -4.75353103 24.70905225 1.020081753 0.883704639 0.216173129 0.077155818 415.7658704 1298908.129 0.01971094 0.208896399 1.76E-05 4.75353103 -0.136377113 ARPSQFPEQSSSAQQNGSVSDIS(ph)PVQAAK ddPTM_A459_MK2206_30min_R2 2 ARPSQFPEQSSSAQQNGSVSDISPVQAAK 29 1 O00139-1;O00139-5;O00139;O00139-4 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ARPSQFPEQSSSAQQNGS(0.001)VS(0.027)DIS(0.971)PVQAAK;ARPSQFPEQSSSAQQNGS(0.279)VS(0.076)DIS(0.645)PVQAAK 132.29 5.27E-14 20342400 49720 57165 50896 62735 59503 53740 63616 50260 51972 59231 TRUE FALSE 53526.60143 54326.26923 52592.84724 57609.34982 57166.61324 55785.11336 55263.14278 56829.15457 56492.43062 57298.29732 0.934174381 0.948130604 0.917878012 1.005428652 0.99770178 0.973591118 0.964481413 0.991812274 0.985935591 1 15.80620465 -5.760378314 24.99999997 0.986851629 0.934867955 0.778498223 0.013425599 13.8848283 327123.831 0.003908308 0.006308189 1.74E-06 5.760378314 -0.051983674 ARQEEGADAS(ph)EEDPTPAGEEDVK ddPTM_A459_MK2206_30min_R2 2 ARQEEGADASEEDPTPAGEEDVK 23 1 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 ARQEEGADAS(0.92)EEDPT(0.08)PAGEEDVK;ARQEEGADAS(1)EEDPTPAGEEDVK 124.96 5.66E-06 26240000 154717 119557 124882 124837 102573 84198 142445 115614 77709 151577 TRUE FALSE 166562.2525 113619.9732 129045.5036 114637.4178 98545.46863 87402.21389 123741.8004 130725.1468 84467.98835 146631.0549 1.135927533 0.77486978 0.880069393 0.781808586 0.672064105 0.596068916 0.843898999 0.891524288 0.576057974 1 17.16183116 -2.409515208 1.292792041 0.762900118 199.9728927 0.397715455 0.129003038 783.5954213 3.232394057 0.036480473 460829.4499 0.003894797 2.409515208 199.2099926 ARQEEGADAS(ph)EEDPTPAGEEDVKDAR ddPTM_A459_MK2206_30min_R2 2 ARQEEGADASEEDPTPAGEEDVKDAR 26 2 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 ARQEEGADAS(0.947)EEDPT(0.053)PAGEEDVKDAR;ARQEEGADAS(0.996)EEDPT(0.004)PAGEEDVKDAR 138.56 3.44E-09 31157000 48032 85869 71487 76699 80304 65649 82806 53623 70826 63430 TRUE FALSE 51709.36685 81604.87033 73870.3409 70432.44635 77150.86146 68147.3187 71933.47273 60631.71022 76986.31746 61360.28429 0.842717198 1.329929795 1.203878726 1.147850717 1.257341982 1.110609566 1.172313224 0.988126292 1.254660377 1 15.90501755 ARQEELYSELQAR ddPTM_A459_MK2206_30min_R1 1 ARQEELYSELQAR 13 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 96.371 0.040122 3453800 1104.2 984.85 1085.4 1158.7 1646.9 1419.8 1314.2 1323.5 811.25 765.24 FALSE TRUE 1010.281992 920.736086 1011.726072 1247.943275 1581.300486 1500.187849 1226.532116 1311.928779 895.5823406 860.0437085 1.1746868 1.070568945 1.176365878 1.451023085 1.838628049 1.744315823 1.426127654 1.525421053 1.041321891 1 9.748266171 -5.745711891 4.489112509 1.485951616 1.125585107 0.202390602 0.252208582 0.262451715 12.64988728 0.072047851 0.121433359 1.80E-06 5.745711891 -0.360366509 ARQPLSEASNQQPLS(ph)GGEEK ddPTM_A459_MK2206_30min_R1 3 ARQPLSEASNQQPLSGGEEK 20 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 ARQPLSEASNQQPLS(1)GGEEK;ARQPLSEASNQQPLS(1)GGEEK;ARQPLSEASNQQPLS(1)GGEEK 127.94 0.00010783 35388400 9150.6 10014.4 11469.3 10209.8 8560.6 7633.6 9390.9 10054.5 9068.8 7717.7 TRUE FALSE 8372.293418 9362.46074 10690.79587 10996.16057 8219.613175 8065.807835 8764.450196 9966.594567 10011.53421 8673.826942 0.965236392 1.079392153 1.232535067 1.267740369 0.947633983 0.929901863 1.010447897 1.149042359 1.154223422 1 13.08245294 -6.276510114 24.94713639 1.033157042 1.139045667 0.196418066 0.103319026 1480.585779 2450861.949 0.035816501 0.040762437 5.29E-07 6.276510114 0.105888626 ARQPLSEASNQQPLS(ph)GGEEK ddPTM_A459_MK2206_30min_R2 2 ARQPLSEASNQQPLSGGEEK 20 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 ARQPLSEASNQQPLS(1)GGEEK;ARQPLSEASNQQPLS(1)GGEEK 142.56 2.70E-05 41384000 88310 114026 98801 94358 125010 85811 128899 95823 92328 115283 TRUE FALSE 95071.0815 108363.6346 102094.976 86648.64956 120101.4793 89076.59774 111974.4065 108347.3951 100358.5225 111521.3252 0.852492394 0.971685321 0.915474918 0.776969333 1.07693734 0.798740489 1.004062733 0.971539703 0.899904322 1 16.76696008 -9.033583678 0.1419353 1.059375628 0.858851723 0.100560421 0.086457946 30.09886126 2.006062942 1.685858017 0.878299465 9.26E-10 9.033583678 -0.200523904 ARQPQS(ph)PPR ddPTM_A459_MK2206_30min_R2 1 ARQPQSPPR 9 1 O95613-2;O95613 O95613-2 PCNT Pericentrin 1 ARQPQS(1)PPR 121.29 0.00347 8763800 3214.7 4099.5 4291 4140.4 4843.9 6533 6039.8 4004.5 3955.7 3575 TRUE FALSE 3460.819904 3895.924791 4434.059798 3802.116076 4653.704147 6781.617893 5246.767005 4527.9019 4299.759636 3458.348043 1.000714752 1.126527678 1.28213232 1.099402382 1.345643669 1.960941412 1.517130994 1.30926727 1.243298703 1 11.75586735 -6.402713503 5.092955948 1.453472194 1.14083066 0.219289695 0.240079007 0.325975362 12.25178593 0.078364854 0.088769246 3.96E-07 6.402713503 -0.312641534 ARQVPS(ph)T(ph)MLT(ph)K ddPTM_A459_MK2206_30min_R2 1 ARQVPSTMLTK 11 1 S4R3Y4 S4R3Y4 AMBP 3 ARQVPS(1)T(1)MLT(1)K 69.598 0.047707 0 23837 25868 23303 20411 23362 21758 24761 22136 19119 28424 TRUE FALSE 25661.97905 24583.43274 24079.91039 18743.35601 22444.6905 22586.01594 21509.85096 25029.2512 20781.93606 27496.52721 0.933280732 0.894055913 0.875743697 0.681662665 0.816273645 0.821413401 0.782275187 0.910269541 0.755802211 1 14.7469618 -10.61949718 14.90143452 0.999865621 0.829235956 0.327421246 0.073048813 0 0 0.072579043 0.017603004 2.40E-11 10.61949718 -0.170629665 ARS(ph)APPMEGAR ddPTM_A459_MK2206_30min_R1 4 ARSAPPMEGAR 11 1 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 ARS(1)APPMEGAR;ARS(1)APPMEGAR;ARS(1)APPMEGAR;ARS(1)APPMEGAR 122.1 0.006438 15152700 4936.1 5198.54 4831.07 5040.44 5914.1 4968.4 5019.7 4684.84 3206.98 2331.32 TRUE FALSE 4516.258775 4860.114101 4503.150429 5428.655562 5678.528874 5249.706514 4684.844972 4643.880938 3540.357047 2620.141522 1.723669785 1.854905187 1.71866687 2.071894024 2.167260366 2.00359655 1.788012186 1.772377903 1.351208329 1 11.35542902 -8.389524054 1.483561339 0.999360504 1.921180573 0.827132497 0.136507935 0.164503402 0.758470359 0.144035948 0.043253137 4.08E-09 8.389524054 0.921820069 ARS(ph)APPMEGAR ddPTM_A459_MK2206_30min_R2 1 ARSAPPMEGAR 11 1 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 ARS(1)APPMEGAR 70.628 0.036144 11308000 11057 12336 6942 12736 10127 14202 11451 9548.8 11421 9252.8 TRUE FALSE 11903.53242 11723.41218 7173.442815 11695.42806 9729.363096 14742.46706 9947.469945 10796.86095 12414.37794 8950.881894 1.329872583 1.309749399 0.801423022 1.30662299 1.08697257 1.647040731 1.111339649 1.206234321 1.38694467 1 13.12781412 -3.676629802 13.77003734 1.222999406 1.322590983 0 0.221661248 0 0 0.049306648 0 0.000210557 3.676629802 0.099591577 ARS(ph)DPTHQHR ddPTM_A459_MK2206_30min_R2 2 ARSDPTHQHR 10 1 A0A2R8Y6L5;A0A2R8Y6I6;Q13627-5;Q13627-2;Q13627 A0A2R8Y6L5 DYRK1A Dual specificity tyrosine-phosphorylation-regulated kinase 1A 1 ARS(0.702)DPT(0.298)HQHR;ARS(0.689)DPT(0.311)HQHR 86.911 0.014726 5045400 5613.8 577.15 1487.88 2321.2 2119.2 1691.01 1834 22987 9277.7 2817.1 TRUE FALSE 6043.596844 548.4895703 1537.485177 2131.550535 2035.98956 1755.36257 1593.193597 25991.47983 10084.65758 2725.178258 2.217688633 0.20126741 0.564177838 0.782169214 0.74710326 0.644127615 0.584619957 9.53753383 3.700549697 1 11.41213489 -7.703593948 24.99999198 5.214320602 0.775463884 0.434491958 2.031036719 57.44612204 24827.17575 0.882467433 0.509492391 1.98E-08 7.703593948 -4.438856718 ARS(ph)MDSSDLSDGAVTLQEYLELKK ddPTM_A459_MK2206_30min_R1 2 ARSMDSSDLSDGAVTLQEYLELKK 24 2 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QLH1 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 ARS(0.922)MDS(0.039)S(0.039)DLSDGAVTLQEYLELKK;ARS(0.954)MDS(0.02)S(0.026)DLSDGAVTLQEYLELKK 92.545 0.0012294 8650200 2163.4 2179.06 2518.9 2445.27 2620.6 2318.3 2072 2390.4 1764.78 1399.27 TRUE FALSE 1979.39147 2037.202798 2347.924086 2633.605119 2516.215953 2449.560143 1933.780661 2369.500985 1948.235196 1572.622132 1.258656755 1.295417861 1.492999519 1.674658563 1.600013062 1.557627922 1.229653724 1.506719852 1.238845084 1 10.61895635 -8.660435816 1.069240192 0.997971555 1.468754484 0.494932673 0.142865758 0.641867717 1.52770076 0.149320461 0.047883862 2.19E-09 8.660435816 0.470782929 ARS(ph)PDLGPQEQMNPK ddPTM_A459_MK2206_30min_R2 2 ARSPDLGPQEQMNPK 15 1 H3BUW4;H3BMU4;A0A0C4DGM2;C9K0J8;Q8IWY8-4;Q8IWY8-3;Q8IWY8-2;Q8IWY8 H3BUW4 ZSCAN29 Zinc finger and SCAN domain-containing protein 29 1 ARS(1)PDLGPQEQMNPK;ARS(1)PDLGPQEQMNPK 111.66 0.0017594 21171300 50903 68711 71491 74070 65436 57256 84030 64224 67735 69718 TRUE FALSE 54800.17282 65298.91166 73874.47426 68018.24406 62866.65385 59434.9172 72996.76006 72618.29731 73626.46786 67443.10737 0.812539264 0.968207341 1.095359884 1.008527731 0.932143495 0.881260065 1.082345742 1.076734156 1.091682616 1 16.04138339 -7.28513149 24.61735121 1.06908516 0.959015987 0.353249984 0.074072165 835.4564654 868078.899 0.033090162 0.022324559 5.19E-08 7.28513149 -0.110069173 ARS(ph)PSVAAMASPQLCR ddPTM_A459_MK2206_30min_R1 2 ARSPSVAAMASPQLCR 16 1 P25325-2 P25325-2 MPST 3-mercaptopyruvate sulfurtransferase 1 ARS(0.998)PS(0.002)VAAMASPQLCR;ARS(0.991)PS(0.009)VAAMASPQLCR 94.325 0.005118 89832000 4695.6 4527.8 4726.3 3834.43 4028.9 3092.3 3448.8 4376.1 4010.4 3441.36 TRUE FALSE 4296.214562 4233.039397 4405.491924 4129.758463 3868.420382 3267.383354 3218.736845 4337.840219 4427.295431 3867.701658 1.110792647 1.094458614 1.139046471 1.067755176 1.000185827 0.844786812 0.832209185 1.121555022 1.1446838 1 11.9172608 -6.158618618 3.193283598 0.980941325 1.111430609 0.260394643 0.094381152 0.390598657 7.593149746 0.032999793 0.043943023 6.94E-07 6.158618618 0.130489284 ARS(ph)PSVAAMASPQLCR ddPTM_A459_MK2206_30min_R2 2 ARSPSVAAMASPQLCR 16 1 P25325-2 P25325-2 MPST 3-mercaptopyruvate sulfurtransferase 1 ARS(1)PSVAAMASPQLCR;ARS(0.994)PS(0.006)VAAMASPQLCR 90.853 0.023764 4049500 9431.4 21675 17285 20291.1 19019.1 10900.1 16903 14442.9 16264 15700.3 TRUE FALSE 10153.47524 20598.65102 17861.27327 18633.25222 18272.31457 11314.91094 14683.6158 16330.63662 17678.61332 15188.0005 0.668519549 1.356245085 1.17601216 1.226840375 1.203075716 0.744990162 0.966790579 1.075232821 1.163985564 1 13.89064433 ARS(ph)PTDDKVK ddPTM_A459_MK2206_30min_R2 1 ARSPTDDKVK 10 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 ARS(0.964)PT(0.036)DDKVK 84.892 0.042086 69455000 90805 59734 77478 56949 82575 46569 83858 117010 81890 94305 TRUE FALSE 97757.10062 56767.69642 80061.07785 52296.08453 79332.69059 48341.21593 72847.34387 132303.6088 89012.64418 91227.83557 1.071570974 0.622262888 0.877594841 0.573247016 0.869610575 0.52989546 0.798521015 1.450254825 0.975718032 1 16.47718647 -7.624602881 8.522850517 1.158099724 0.746167079 0.445795454 0.193442986 0.205080068 15.46000094 0.084661266 0.048693977 2.37E-08 7.624602881 -0.411932645 ARS(ph)PYSPAEEDALFMDLPTGPR ddPTM_A459_MK2206_30min_R1 1 ARSPYSPAEEDALFMDLPTGPR 22 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 ARS(0.401)PY(0.321)S(0.278)PAEEDALFMDLPTGPR 85.969 0.00033165 5664900 845.92 767.31 717.93 727.33 729.51 835.01 720.4 905.54 577.66 617.39 TRUE FALSE 773.9700619 717.3579795 669.1989119 783.3490826 700.4520719 882.2875446 672.3434304 897.6229593 637.7098242 693.8769343 1.115428434 1.03384036 0.964434583 1.12894527 1.009475942 1.27153318 0.968966393 1.293634238 0.919053211 1 9.438535999 -4.415032574 14.78427581 1.075173057 2.698488791 0.009356162 0.121969586 1018221.62 1564020.667 0.028099852 54257101.6 3.85E-05 4.415032574 1.623315734 ARS(ph)PYSPAEEDALFMDLPTGPR ddPTM_A459_MK2206_30min_R2 1 ARSPYSPAEEDALFMDLPTGPR 22 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 ARS(0.527)PY(0.318)S(0.155)PAEEDALFMDLPTGPR 72.167 0.0017089 1777900 3109 4539.1 4445.4 4748.6 4023.4 3591.2 5818.7 3889.2 4591.8 4944.8 TRUE FALSE 3347.02743 4313.694894 4593.607417 4360.62419 3865.4211 3727.865632 5054.6977 4397.531794 4991.186464 4783.451581 0.699709692 0.901795455 0.960312306 0.911606215 0.808081996 0.779325466 1.056705104 0.9193219 1.043427822 1 12.22383628 -7.265048889 24.99903589 0.998140532 0.852922243 0.507531549 0.077435675 313.2870755 2169775.215 0.032818596 0.02309771 5.43E-08 7.265048889 -0.145218289 ARS(ph)SSVPR ddPTM_A459_MK2206_30min_R2 1 ARSSSVPR 8 1 Q7Z591-4;Q7Z591-5;Q7Z591-8;Q7Z591-7;Q7Z591-2;Q7Z591 Q7Z591-4 AKNA AT-hook-containing transcription factor 1 ARS(0.869)S(0.114)S(0.017)VPR 64.841 0.047556 2143300 1244 2261.3 2014.1 2695.8 3317.9 2549.8 2326.5 6391.3 4950.1 3843.6 TRUE FALSE 1339.241596 2149.00713 2081.249089 2475.544517 3187.622575 2646.834426 2021.027755 7226.664855 5380.65075 3718.183647 0.360187049 0.577972294 0.559748868 0.665794041 0.857306383 0.711862209 0.54355243 1.943600839 1.447118072 1 11.86038231 -7.74748982 24.999621 1.521519592 0.623151924 0.715808341 0.245302974 107.0736018 191892.0737 0.112713146 0.064654062 1.79E-08 7.74748982 -0.898367668 ARSDEGQLS(ph)PATR ddPTM_A459_MK2206_30min_R1 4 ARSDEGQLSPATR 13 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 ARSDEGQLS(0.969)PAT(0.03)R;ARSDEGQLS(0.5)PAT(0.5)R;ARSDEGQLS(0.997)PAT(0.003)R;ARSDEGQLS(1)PATR 196.97 0.00060405 60450800 11950 10484.5 11025.1 11913.8 13678.3 10515.2 10056.3 12358.1 6752.6 4969.25 TRUE FALSE 10933.58975 9801.957144 10276.74693 12831.40294 13133.46435 11110.56154 9385.462576 12250.05443 7454.556934 5584.878206 1.957713194 1.755088792 1.840102246 2.29752601 2.351611595 1.989400866 1.680513384 2.193432691 1.334775202 1 12.4473101 -8.431818775 3.802049189 1.007043458 2.002439505 0.724444543 0.211650934 0.117806448 3.018891598 0.220675979 0.058159253 3.70E-09 8.431818775 0.995396047 ARSDEGQLS(ph)PATR ddPTM_A459_MK2206_30min_R2 3 ARSDEGQLSPATR 13 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 ARSDEGQLS(1)PATR;ARSDEGQLS(0.905)PAT(0.095)R;ARSDEGQLS(1)PATR 141.59 0.00062706 47731300 36509.8 78510 58692 71320 86779 79569 71539 56476 95121 59277 TRUE FALSE 39305.01836 74611.30756 60648.76199 65492.92786 83371.62043 82597.05405 62145.84337 63857.60711 103394.4526 57342.79634 0.685439512 1.301145258 1.057652676 1.142129998 1.453916198 1.440408549 1.083760251 1.113611668 1.803094011 1 15.80732464 -4.494371709 2.324312455 1.269861004 2.40E-13 0.348401214 0.234638135 2.589275009 7.091905984 0.06034378 9.263548956 3.20E-05 4.494371709 -1.269861004 ARSPGGS(ph)SR ddPTM_A459_MK2206_30min_R2 1 ARSPGGSSR 9 1 Q5TEA3 Q5TEA3 C20orf194 Uncharacterized protein C20orf194 1 ARSPGGS(0.777)S(0.222)R 74.698 0.033521 3596600 0 0 0 0 0 1881.7 0 0 0 0 TRUE FALSE 0 0 0 0 0 1953.309412 0 0 0 0 0 ARSPS(ph)VAAMASPQLCR ddPTM_A459_MK2206_30min_R1 1 ARSPSVAAMASPQLCR 16 1 P25325-2 P25325-2 MPST 3-mercaptopyruvate sulfurtransferase 1 ARS(0.112)PS(0.888)VAAMASPQLCR 151.73 0.00091412 56483000 2014.8 1912.5 1916 1675.1 2041 1765.8 2099.1 2123.9 1388.8 1068.8 TRUE FALSE 1843.43068 1787.995902 1785.947258 1804.116492 1959.702648 1865.77807 1959.072869 2105.330966 1533.17073 1201.211013 1.534643505 1.48849443 1.486788948 1.501914712 1.631439128 1.553247556 1.630914842 1.752673713 1.276354207 1 10.23027389 -8.517012253 4.940802494 1.000548164 1.566487982 0.846656312 0.078373282 0.056864085 5.101380536 0.081689698 0.021257614 3.04E-09 8.517012253 0.565939818 ARSPS(ph)VAAMASPQLCR ddPTM_A459_MK2206_30min_R2 1 ARSPSVAAMASPQLCR 16 1 P25325-2 P25325-2 MPST 3-mercaptopyruvate sulfurtransferase 1 ARS(0.047)PS(0.952)VAAMAS(0.001)PQLCR 89.43 0.041951 0 10877 15959 15935 17356 15515 16611 15835 11506 14591 14570 TRUE FALSE 11709.75148 15166.49927 16466.26495 15937.95928 14905.80314 17243.14324 13755.84548 13009.87371 15860.09881 14094.58209 0.830798062 1.076051717 1.168269115 1.130786225 1.057555523 1.223388046 0.975966892 0.923040756 1.125262083 1 13.78285308 -9.849038666 9.142579796 1.000000013 1.061423927 0.02098535 0.112429864 0 0 0.110911591 0.026900012 1.42E-10 9.849038666 0.061423914 ARSPY(ph)SPAEEDALFMDLPTGPR ddPTM_A459_MK2206_30min_R1 1 ARSPYSPAEEDALFMDLPTGPR 22 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 ARS(0.364)PY(0.612)S(0.024)PAEEDALFMDLPTGPR 92.136 0.0030151 5836000 1913.2 2235.3 2217 2169.5 2684.5 2078.7 2442.9 2229.4 2091.7 2137.8 TRUE FALSE 1750.472293 2089.781564 2066.516217 2336.595266 2577.57068 2196.394198 2279.938598 2209.908591 2309.1397 2402.646804 0.728559974 0.869783091 0.860099876 0.972508844 1.072804657 0.914156086 0.948927905 0.91978088 0.961081627 1 11.23040887 -4.835586028 1.100635283 0.96521319 0.640642605 0.695538335 0.048605768 0.955377942 1.016291595 0.016362899 0.355129919 1.46E-05 4.835586028 -0.324570584 ARSPY(ph)SPAEEDALFMDLPTGPR ddPTM_A459_MK2206_30min_R2 2 ARSPYSPAEEDALFMDLPTGPR 22 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 ARS(0.062)PY(0.876)S(0.062)PAEEDALFMDLPTGPR;ARS(0.267)PY(0.646)S(0.087)PAEEDALFMDLPTGPR 124.82 0.00029142 4888800 9865.2 13157.2 10333.7 10469.3 13167.4 12914.1 10246.5 8874.2 12838.3 10868.7 TRUE FALSE 10620.4873 12503.83258 10678.2204 9613.9247 12650.38172 13405.55512 8901.122242 10034.08841 13954.95213 10514.05521 1.010122839 1.189249279 1.01561388 0.914387885 1.203187682 1.275012815 0.846592686 0.954349983 1.327266392 1 13.3600316 -2.790950937 18.88306333 1.072381769 0.476846346 0 0.154598151 0 0 0.035329197 0 0.001618263 2.790950937 -0.595535422 ARTDEVPAGGS(ph)RSEAEDEDDEDYVPYVPLR ddPTM_A459_MK2206_30min_R1 2 ARTDEVPAGGSRSEAEDEDDEDYVPYVPLR 30 2 D6RGI7;A0A499FJW5;Q9UJV9;D6RD33 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 1 ART(0.147)DEVPAGGS(0.615)RS(0.238)EAEDEDDEDYVPYVPLR;ART(0.006)DEVPAGGS(0.497)RS(0.497)EAEDEDDEDYVPYVPLR 64.701 0.00021564 14091200 1697.03 1647.84 2234.15 1625.23 1646.66 1319.46 1656.76 1800.63 1546.35 941.76 TRUE FALSE 1552.688687 1540.565316 2082.502123 1750.405496 1581.070045 1394.166685 1546.240563 1784.887282 1707.098616 1058.432339 1.466970188 1.455516106 1.967534481 1.653771745 1.493784711 1.31719963 1.460878043 1.686349912 1.612855686 1 10.04771333 -6.318414195 5.014749477 1.456760323 1.646809586 0.171462918 0.218539642 0.445818835 24.05869835 0.06997837 0.080731783 4.80E-07 6.318414195 0.190049263 ARVDHGAEIITQS(ph)PGR ddPTM_A459_MK2206_30min_R2 2 ARVDHGAEIITQSPGR 16 1 A0A669KB77;P11137-2;P11137-4;P11137-3;P11137 A0A669KB77 MAP2 Microtubule-associated protein 2 1 ARVDHGAEIIT(0.103)QS(0.897)PGR;ARVDHGAEIIT(0.253)QS(0.747)PGR 54.74 0.040344 6083600 16396.5 27370 22598 30330 27480 30292 26713 22273 28509 22814 TRUE FALSE 17651.82865 26010.8456 23351.40604 27851.94198 26400.99712 31444.78329 23205.55101 25184.15757 30988.66129 22069.58105 0.799826177 1.178583569 1.058081075 1.262005922 1.196261817 1.424802003 1.051472203 1.141125313 1.404134552 1 14.42977162 -4.300568654 1.417307338 1.208216365 5.81E-14 0.420820655 0.135911677 3.975365972 2.863988227 0.037276175 9.555731529 5.01E-05 4.300568654 -1.208216365 ARVS(ph)SGYVPPPVATPFSSK ddPTM_A459_MK2206_30min_R1 1 ARVSSGYVPPPVATPFSSK 19 1 Q15942;Q15942-2;H7C3R3 Q15942 ZYX Zyxin 1 ARVS(0.727)S(0.27)GY(0.003)VPPPVATPFSSK 90.378 0.0014881 24502000 3087.7 2811.7 3195.4 3369.7 3133.7 2915.1 2859.9 2927.5 2176 1846.6 TRUE FALSE 2825.074901 2628.657819 2978.505151 3629.234878 3008.878093 3080.150443 2669.121289 2901.905176 2402.202987 2075.370749 1.361238662 1.266596737 1.435167742 1.748716406 1.449802689 1.484144673 1.286093721 1.398258686 1.157481374 1 11.01915337 -8.375183663 1.03123 0.997664922 1.454403058 0.579974928 0.124068305 0.398526797 0.912398361 0.12791964 0.04293677 4.22E-09 8.375183663 0.456738136 ARVS(ph)SGYVPPPVATPFSSK ddPTM_A459_MK2206_30min_R2 2 ARVSSGYVPPPVATPFSSK 19 1 Q15942;Q15942-2;H7C3R3 Q15942 ZYX Zyxin 1 ARVS(0.736)S(0.264)GYVPPPVATPFSSK;ARVS(0.461)S(0.461)GY(0.078)VPPPVATPFSSK 99.964 0.00072325 33719000 75392 73650 77089 79624 99414 86280 90505 63779 64205 64910 TRUE FALSE 81164.06949 69992.6481 79659.10878 73118.4645 95510.50684 89563.44586 78621.58478 72115.13429 69789.43484 62791.99202 1.292586314 1.114674752 1.268618915 1.164455246 1.521061903 1.426351402 1.252095725 1.148476613 1.111438459 1 15.93829296 -8.057465244 1.726706976 1.03277954 1.293678341 0.437474367 0.11133814 0.400237812 2.131281547 0.109409442 0.035220502 8.76E-09 8.057465244 0.260898801 ARVSS(ph)GYVPPPVATPFSSK ddPTM_A459_MK2206_30min_R1 1 ARVSSGYVPPPVATPFSSK 19 1 Q15942;Q15942-2;H7C3R3 Q15942 ZYX Zyxin 1 ARVS(0.362)S(0.637)GY(0.001)VPPPVATPFSSK 138 8.41E-05 29481000 2863 3208.5 3446.5 2899.5 3082.9 3023.3 2930.1 2720.5 2274.4 1940.5 TRUE FALSE 2619.486816 2999.626067 3212.561182 3122.819992 2960.101565 3194.476633 2734.638375 2696.714955 2510.832019 2180.90379 1.201101501 1.375405041 1.473041221 1.431892597 1.357282049 1.464748994 1.253901427 1.236512572 1.151280506 1 11.09071041 -8.177493603 0.988251377 1.009997313 1.388080986 0.715442488 0.077523576 0.275625379 0.537135877 0.074767265 0.026486263 6.65E-09 8.177493603 0.378083673 AS(ph)AS(ph)S(ph)S(ph)AKK ddPTM_A459_MK2206_30min_R2 1 ASASSSAKK 9 1 Q5VYM1-3;Q5VYM1-2;Q5VYM1 Q5VYM1-3 C9orf131 Uncharacterized protein C9orf131 4 AS(1)AS(1)S(1)S(1)AKK 63.48 0.038155 0 13131 15186 19001 22208 20382 16286 11957 15058 16843 12083 TRUE FALSE 14136.31946 14431.88532 19634.48386 20393.53536 19581.70027 16905.77514 10387.03154 17026.1323 18307.97369 11688.7327 1.209397102 1.234683493 1.679778669 1.744717403 1.675262902 1.446330888 0.888636245 1.456627741 1.566292443 1 13.5128309 -7.017072227 24.47946654 1.251876002 1.520614632 0.222535808 0.247840657 994.0392259 1425327 0.099897735 0.079334722 9.61E-08 7.017072227 0.26873863 AS(ph)DGQLQAK ddPTM_A459_MK2206_30min_R1 1 ASDGQLQAK 9 0 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 AS(1)DGQLQAK 130.56 0.0038135 3614700 2463.8 3212.4 2591.3 2334.7 1900.7 1899.1 2749.7 2227.7 1064.2 3240.9 TRUE FALSE 2254.240872 3003.272176 2415.409776 2514.518999 1824.991094 2006.625401 2566.27253 2208.223454 1174.827398 3642.40716 0.618887668 0.824529506 0.663135578 0.690345392 0.501039838 0.550906396 0.704553999 0.606253875 0.322541481 1 11.83067648 -10.68763434 4.901921843 1.000030802 0.617274876 0.456609772 0.127640835 4.43E-05 7.55E-06 0.127378546 0.030891353 2.05E-11 10.68763434 -0.382755926 AS(ph)DGQLQAK ddPTM_A459_MK2206_30min_R2 4 ASDGQLQAK 9 0 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 AS(1)DGQLQAK;AS(1)DGQLQAK;AS(1)DGQLQAK;AS(1)DGQLQAK 134.49 0.0028702 33982000 205632 180123 173735 201129 192732 154761 224550 179228 151573 209424 TRUE FALSE 221375.344 171178.3537 179527.2382 184696.1173 185164.3733 160650.5383 195066.3153 202653.715 164756.5456 202590.512 1.092723158 0.844947535 0.886158174 0.911672099 0.913983441 0.79298155 0.962860073 1.000311974 0.81324907 1 17.62820708 -9.99732792 8.495578771 0.999999995 0.910869884 0.085300686 0.084951589 0 0 0.078887149 0.019132944 1.01E-10 9.99732792 -0.089130111 AS(ph)DKDITVSK ddPTM_A459_MK2206_30min_R2 2 ASDKDITVSK 10 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 AS(0.985)DKDIT(0.013)VS(0.002)K;AS(0.61)DKDIT(0.39)VS(0.001)K 113.24 0.036784 27456000 48329 39417 36974 31680 31732 21748 41530 30597 29157 35436 TRUE FALSE 52029.1054 37459.6091 38206.69471 29091.64266 30486.04224 22575.63538 36077.06111 34596.13296 31693.02316 34279.72622 1.517780657 1.092762785 1.114556588 0.848654463 0.889331555 0.658571053 1.052431425 1.009230142 0.924541315 1 15.06506797 -4.194826255 1.01969011 0.912525772 2.801018134 0.708208758 0.114450826 2.992751236 1.088631934 0.038063934 8.232087313 6.39E-05 4.194826255 1.888492362 AS(ph)DLEDEESAAR ddPTM_A459_MK2206_30min_R1 2 ASDLEDEESAAR 12 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 AS(1)DLEDEESAAR;AS(1)DLEDEESAAR 246.63 3.41E-18 46253000 4507 4082.8 4283.8 2851.9 3982.1 4167.9 5365.8 3680.5 5155.7 6577.2 TRUE FALSE 4123.655983 3817.008978 3993.027591 3071.553832 3823.484525 4403.882896 5007.857272 3648.321777 5691.653465 7392.033191 0.557851389 0.516367944 0.540179879 0.415522192 0.517243961 0.595760704 0.677466827 0.493547808 0.769971308 1 12.85175552 -8.896995944 0.573393812 1.016980919 0.510898683 0.812814897 0.069596953 0.614313032 0.391607401 0.088433501 0.031888885 1.27E-09 8.896995944 -0.506082236 AS(ph)DLEDEESAAR ddPTM_A459_MK2206_30min_R2 4 ASDLEDEESAAR 12 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 AS(1)DLEDEESAAR;AS(1)DLEDEESAAR;AS(1)DLEDEESAAR;AS(0.995)DLEDEES(0.005)AAR 215.02 1.02E-06 196861700 115597 112544 109572 122748 108496 112814 108624 99816 95590 128105 TRUE FALSE 124447.1952 106955.2286 113225.0758 112719.0957 104235.9019 117107.2158 94361.53832 112862.2939 103904.2454 123924.9443 1.004214251 0.863064568 0.913658476 0.90957552 0.841121232 0.944985019 0.761441039 0.910731044 0.838444963 1 16.91910709 -4.755883174 24.72925237 0.882205557 1.004214476 0.23801246 0.062387706 209.0558069 930341.3954 0.01431208 0.121309979 1.75E-05 4.755883174 0.122008919 AS(ph)DPGLPAEEPK ddPTM_A459_MK2206_30min_R1 4 ASDPGLPAEEPK 12 0 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK 183.06 0.00010427 403554000 25053.4 29140.2 29082.1 20360.9 16482.4 18795 30025.2 23131.9 38407.1 49428.4 TRUE FALSE 22922.47677 27243.16768 27108.08808 21929.10005 15825.87111 19859.15666 28022.27369 22929.66024 42399.65549 55551.96336 0.412631262 0.490408728 0.487977138 0.394749325 0.2848841 0.357487935 0.504433543 0.412760573 0.76324315 1 15.76155028 -8.446906638 2.367785281 0.999554626 0.415073548 0.899151097 0.064402788 0.085525123 1.026299165 0.067969285 0.018708234 3.57E-09 8.446906638 -0.584481078 down AS(ph)DPGLPAEEPK ddPTM_A459_MK2206_30min_R2 4 ASDPGLPAEEPK 12 0 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK 175.21 0.00011111 592400000 521636 407772 455789 362943 347647 261762 573717 413288 320769 590863 TRUE FALSE 561572.8532 387522.6354 470984.7778 333289.3959 333996.632 271723.5363 498387.2687 467306.1606 348668.9078 571583.1887 0.982486652 0.677981164 0.824000403 0.583098668 0.584335996 0.475387558 0.87194179 0.817564564 0.610005533 1 19.12460396 -12.8917788 20.11225425 0.994087426 0.725408809 0 0.173033487 0 0 0 0.039182986 1.28E-13 12.8917788 -0.268678618 AS(ph)DPGLPAEEPKEK ddPTM_A459_MK2206_30min_R1 2 ASDPGLPAEEPKEK 14 1 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 AS(1)DPGLPAEEPKEK;AS(1)DPGLPAEEPKEK 192.54 0.00052939 14502900 5448.1 5649.1 6232.3 5843.6 5720.2 4921.4 5527.3 6534.2 5070.5 3968.12 TRUE FALSE 4984.710486 5281.342563 5809.26884 6293.675085 5492.352321 5200.045415 5158.583902 6477.072178 5597.59662 4459.720663 1.117718095 1.184231696 1.30260823 1.411226299 1.231546264 1.166002494 1.156705608 1.452349299 1.255145118 1 12.12273763 -8.628786897 19.96751996 1 1.257093036 0.348000181 0.103786132 76997.24951 14516749.6 0.10603948 0.027379276 2.35E-09 8.628786897 0.257093036 AS(ph)DPGLPAEEPKEK ddPTM_A459_MK2206_30min_R2 2 ASDPGLPAEEPKEK 14 1 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 AS(1)DPGLPAEEPKEK;AS(1)DPGLPAEEPKEK 168.5 0.00036076 4377300 17442.4 39856 41146 35557 51315 36328 43959 24385 44203 34833 TRUE FALSE 18777.80355 37876.809 42517.7871 32651.87936 49300.11526 37710.4875 38187.1305 27572.20323 48047.69704 33696.40206 0.557264349 1.124060929 1.261790117 0.969001952 1.463067635 1.119125046 1.133270265 0.818253628 1.425899921 1 15.04030694 -4.762376298 6.055366573 1.148514007 0.536357471 0.469473168 0.18793072 0.112109057 16.22350014 0.044480853 0.285060928 1.73E-05 4.762376298 -0.612156537 AS(ph)DPGLPAVFLRPGAGIPR ddPTM_A459_MK2206_30min_R2 1 ASDPGLPAVFLRPGAGIPR 19 1 H7BZB3 H7BZB3 CAD 1 AS(1)DPGLPAVFLRPGAGIPR 67.579 0.011305 3177400 4227.1 4582.1 5510.7 8052.1 6240.9 6313.4 8105.7 5140.9 4996.1 7335.5 TRUE FALSE 4550.730026 4354.559577 5694.423988 7394.217673 5995.850908 6553.660861 7041.411853 5812.833281 5430.651747 7096.143236 0.641296247 0.61365159 0.802467453 1.042005133 0.844945023 0.923552505 0.992287165 0.819153882 0.765296241 1 12.79281942 -5.418664494 3.837325808 0.907027756 0.629563686 0.651461688 0.082344465 0.141683209 3.686220174 0.022523444 0.050131619 3.81E-06 5.418664494 -0.277464071 AS(ph)DSEEPEEK ddPTM_A459_MK2206_30min_R2 1 ASDSEEPEEK 10 0 Q9C0E8-3;Q9C0E8-2;Q9C0E8;Q9C0E8-4 Q9C0E8-3 LNP Protein lunapark 1 AS(1)DSEEPEEK 144.1 0.0010172 5377300 34694 9370.2 15561 12149 8996.5 7789.3 22217 14557 10451 19157 TRUE FALSE 37350.19932 8904.889494 16079.79597 11156.38784 8643.252206 8085.72727 19299.88121 16459.64988 11360.00909 18531.90866 2.015453454 0.480516587 0.86768159 0.60200965 0.466398382 0.436313788 1.041440554 0.88817888 0.612997252 1 14.17772386 -4.755497999 24.99331779 0.702769751 2.015455592 0.769401332 0.214265027 92.98628222 391122.0716 0.054546808 0.481657832 1.76E-05 4.755497999 1.31268584 AS(ph)EAPS(ph)PPDS(ph)LNIMDIT(ph)KSTVSLAWPK ddPTM_A459_MK2206_30min_R2 1 ASEAPSPPDSLNIMDITKSTVSLAWPK 27 1 A0A0A0MTS7;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12;A0A0A0MRA3;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9 A0A0A0MTS7 TTN Titin 4 AS(1)EAPS(1)PPDS(0.997)LNIMDIT(0.736)KS(0.089)T(0.089)VS(0.089)LAWPK 49.902 0.03414 0 1926.8 2411.9 2481.2 2366 1185.4 3173.3 3084.6 1948.2 2542.6 2204.2 TRUE FALSE 2074.317289 2292.128553 2563.92197 2172.690232 1138.85524 3294.062155 2679.588315 2202.836429 2763.750752 2132.277135 0.972817865 1.074967468 1.20243374 1.018953023 0.534102824 1.544856483 1.256679196 1.033091053 1.29614988 1 11.05817924 -6.782780368 24.99977995 1.230131039 0.983676244 0.275800536 0.21344054 368.8415622 432074.3986 0.07695711 0.067933264 1.65E-07 6.782780368 -0.246454795 AS(ph)GEMASAQYITAALR ddPTM_A459_MK2206_30min_R1 3 ASGEMASAQYITAALR 16 0 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 1 AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR 273.52 8.74E-51 88005100 2931.37 2643.79 3054.06 2138.61 2813.28 2584.47 3692.98 2590.96 3980.97 4457.04 TRUE FALSE 2682.041588 2471.67879 2846.758916 2303.326113 2701.2211 2730.800458 3446.628042 2568.30751 4394.806078 5009.211764 0.535421882 0.493426692 0.568304765 0.459818075 0.53925073 0.545155722 0.688057963 0.512716897 0.877344837 1 12.29036789 -8.375746102 3.24315784 0.997603771 0.542739479 0.88254483 0.058398562 0.074811021 1.412701072 0.057166819 0.015381246 4.21E-09 8.375746102 -0.454864292 AS(ph)GEMASAQYITAALR ddPTM_A459_MK2206_30min_R2 6 ASGEMASAQYITAALR 16 0 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 1 AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(0.998)GEMAS(0.002)AQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR 258.13 5.88E-39 130883000 176174.2 119536.5 138809.5 136508.3 130305 134095.2 159503.4 129206.3 105103.5 149372.4 TRUE FALSE 189662.2322 113600.4912 143437.3394 125355.1352 125188.571 139198.2868 138560.412 146094.007 114245.2124 144498.3908 1.312556016 0.786171324 0.992657002 0.867519247 0.866366541 0.963320671 0.958906263 1.01104245 0.790633112 1 17.1406939 -4.749378028 24.9679234 0.917801942 1.312556926 0.691122143 0.079679139 301.2909152 623656.4669 0.018735714 0.307794312 1.78E-05 4.749378028 0.394754984 AS(ph)GQAFELILSPR ddPTM_A459_MK2206_30min_R1 4 ASGQAFELILSPR 13 0 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 AS(0.995)GQAFELILS(0.005)PR;AS(1)GQAFELILSPR;AS(1)GQAFELILSPR;AS(0.999)GQAFELILS(0.001)PR 160.93 0.00036382 77738300 2459.33 2874.79 2959.41 2523.45 3141.09 3271.69 3484.31 2868.26 3085.77 2797.47 TRUE FALSE 2250.151069 2687.640648 2758.533495 2717.806556 3015.973734 3456.93026 3251.878037 2843.183105 3406.546834 3144.041703 0.715687412 0.854836196 0.877384512 0.864430823 0.959266453 1.099517941 1.034298633 0.904308331 1.083492891 1 11.61840464 -5.427561868 0.682052232 1.022293706 0.692964493 0.711619769 0.060605937 0.92968913 0.572845486 0.031918221 0.20979695 3.74E-06 5.427561868 -0.329329214 AS(ph)GQAFELILSPR ddPTM_A459_MK2206_30min_R2 4 ASGQAFELILSPR 13 0 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 AS(1)GQAFELILSPR;AS(0.565)GQAFELILS(0.435)PR;AS(1)GQAFELILSPR;AS(1)GQAFELILSPR 172.32 0.00017883 42656900 15824 17344.6 17703.2 20493.5 21547.4 20534 16663.7 14617.27 19960.9 21819.9 TRUE FALSE 17035.49761 16483.29239 18293.41585 18819.11549 20701.34081 21315.43576 14475.73617 16527.79738 21697.063 21107.91845 0.807066677 0.780905631 0.866661291 0.891566619 0.980738146 1.009831254 0.68579648 0.783014082 1.027911068 1 14.36549669 -12.3395374 0.018440887 1.98212853 4.69E-06 0.169926695 0.102164038 5871.122692 12.23098798 789.9108143 543.9898545 4.58E-13 12.3395374 -1.982123838 AS(ph)GSENEGDYNPGR ddPTM_A459_MK2206_30min_R2 1 ASGSENEGDYNPGR 14 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 AS(0.637)GS(0.363)ENEGDYNPGR 146.84 0.00049 53822000 11863 11177 8803.6 17179 12673 10016 13453 13934 9636.5 13990 TRUE FALSE 12771.2404 10621.96643 9097.10763 15775.42075 12175.39434 10397.1659 11686.60494 15755.22164 10474.66535 13533.50745 0.943675574 0.784864269 0.672191423 1.165656487 0.899648106 0.768253606 0.863531127 1.164163962 0.773980093 1 13.72424817 -6.290415249 0.198532031 1.010706285 0.768830232 0.046399012 0.154974047 23.56094541 1.729616362 0.473882832 1.567386166 5.12E-07 6.290415249 -0.241876053 AS(ph)GVAVSDGVIK ddPTM_A459_MK2206_30min_R1 2 ASGVAVSDGVIK 12 0 P23528;E9PP50;E9PS23 P23528 CFL1 Cofilin-1 1 AS(0.991)GVAVS(0.009)DGVIK;AS(0.991)GVAVS(0.009)DGVIK 160.84 0.00047655 32335000 4021.5 4488.2 4471.2 3231.1 3741.4 3510.9 3758.8 3515.9 3379.4 2743.1 TRUE FALSE 3679.450307 4196.017364 4167.707401 3479.959882 3592.372115 3709.684124 3508.05731 3485.160857 3730.700723 3082.935937 1.193489058 1.361045915 1.351863122 1.128781121 1.165243842 1.203295884 1.137894975 1.130468141 1.210112957 1 11.5900892 -1.522879073 0.042474058 0.51751463 2.332860496 0.526077614 0.06977802 537.9198731 1.742854449 19.68439272 68.49947662 0.029999977 1.522879073 1.815345866 AS(ph)GVAVSDGVIK ddPTM_A459_MK2206_30min_R2 4 ASGVAVSDGVIK 12 0 P23528;E9PP50;E9PS23 P23528 CFL1 Cofilin-1 1 AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(0.995)GVAVS(0.005)DGVIK;AS(1)GVAVSDGVIK 143.25 0.00084138 52711900 139632 153888 148847 160774 162329 135715 168038 128184 118185 139598 TRUE FALSE 150322.3333 146246.1457 153809.4847 147638.2499 155955.1478 140879.7294 145974.4088 144938.0889 128464.5177 135042.9287 1.113144796 1.082960412 1.138967336 1.093269017 1.154856084 1.043221817 1.080948186 1.073274183 0.95128652 1 17.04305857 -8.127319909 3.610314658 0.976131206 1.100445609 0.707055164 0.03168313 0.131963277 2.964693617 0.024787499 0.008323193 7.46E-09 8.127319909 0.124314403 AS(ph)HSSERPPPR ddPTM_A459_MK2206_30min_R2 1 ASHSSERPPPR 11 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 AS(0.915)HS(0.072)S(0.014)ERPPPR 66.326 0.042881 7014800 1049.8 3432.7 1096.9 4611.1 3525 5786.6 4565.3 3353.1 4291.4 2918 TRUE FALSE 1130.173495 3262.23711 1133.470099 4234.35838 3386.590788 6006.813118 3965.870626 3791.361683 4664.658215 2822.785899 0.400375209 1.155679965 0.401543064 1.500063601 1.199733494 2.127973333 1.404949142 1.343127612 1.6525016 1 11.46290399 -5.774957468 24.95931471 1.49003474 0.702847506 0.536666117 0.34264022 163.4996413 301879.6276 0.092618571 0.138236278 1.68E-06 5.774957468 -0.787187233 AS(ph)ISEPSDTDPEPR ddPTM_A459_MK2206_30min_R2 2 ASISEPSDTDPEPR 14 0 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 AS(0.921)IS(0.064)EPS(0.011)DT(0.004)DPEPR;AS(0.921)IS(0.079)EPSDTDPEPR 247.73 2.53E-27 6497700 19880 19916.7 18861.9 21587 20193.1 20371 21655 15975 16627.1 20933.2 TRUE FALSE 21402.02809 18927.66564 19490.74633 19823.27305 19400.21743 21146.23268 18811.67249 18062.98735 18073.2951 20250.1514 1.056882374 0.93469255 0.962498796 0.978919745 0.958028266 1.044250597 0.928964536 0.891992706 0.892501727 1 14.30564507 -7.49441576 23.82864311 0.917444045 0.983882159 0.288657898 0.045418796 450.4595145 377116.9265 0.018328849 0.012321826 3.20E-08 7.49441576 0.066438113 AS(ph)LEDAPVDDLTR ddPTM_A459_MK2206_30min_R1 5 ASLEDAPVDDLTR 13 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 AS(1)LEDAPVDDLTR;AS(1)LEDAPVDDLTR;AS(1)LEDAPVDDLTR;AS(1)LEDAPVDDLTR;AS(1)LEDAPVDDLTR 295.29 3.33E-61 367443900 10015.62 10433.85 11142.14 7802.61 9057.32 9948.08 10686.8 9093.37 11234.18 12215.44 TRUE FALSE 9163.738925 9754.604469 10385.84258 8403.568374 8696.547765 10511.33169 9973.903071 9013.867625 12402.01321 13728.78093 0.667483804 0.710522261 0.756501443 0.612113225 0.63345375 0.765642029 0.726495901 0.656567227 0.903358665 1 13.7449159 -8.409731253 3.543208105 0.997104802 0.693068267 0.825710417 0.04870234 0.089968432 1.980319117 0.048854774 0.012964432 3.89E-09 8.409731253 -0.304036534 AS(ph)LEDAPVDDLTR ddPTM_A459_MK2206_30min_R2 4 ASLEDAPVDDLTR 13 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 AS(1)LEDAPVDDLTR;AS(1)LEDAPVDDLTR;AS(1)LEDAPVDDLTR;AS(1)LEDAPVDDLTR 228.93 5.28E-13 198406340 110515.9 92965.4 107903.3 117163.4 93515.5 92604.1 118646.2 95278.2 81112.6 118659.5 TRUE FALSE 118977.0823 88348.87342 111500.7422 107590.7754 89843.61159 96128.21392 103067.8114 107731.3879 88167.62733 114787.6502 1.036497237 0.769672288 0.971365316 0.937302708 0.782694056 0.837443869 0.897899828 0.938527687 0.76809332 1 16.80860791 -4.732585177 24.75106446 0.877319718 1.036498268 0.255635441 0.081071218 4316.682563 3702612.993 0.019379348 2.08849288 1.85E-05 4.732585177 0.15917855 AS(ph)LEDAPVDDLTRK ddPTM_A459_MK2206_30min_R1 2 ASLEDAPVDDLTRK 14 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 AS(1)LEDAPVDDLTRK;AS(1)LEDAPVDDLTRK 112.03 0.0040132 2530700 2853 2989.8 3425.9 2412.3 2802.5 2455.8 2712.7 2602.5 2940.9 2334.8 TRUE FALSE 2610.337368 2795.163477 3193.359453 2598.095764 2690.870491 2594.845274 2531.740733 2579.746617 3246.617079 2624.052651 0.994773244 1.06520861 1.216957081 0.990108092 1.025463605 0.988869363 0.964820859 0.983115417 1.237253025 1 11.35758095 -4.750606129 23.61959543 1.049522578 0.994773013 0.03303048 0.092383761 1111.119854 2422226.484 0.02338643 0.317376154 1.78E-05 4.750606129 -0.054749564 AS(ph)LEDAPVDDLTRK ddPTM_A459_MK2206_30min_R2 1 ASLEDAPVDDLTRK 14 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 AS(1)LEDAPVDDLTRK 65.038 0.037572 2534200 9761.3 14856 11528 12905 13697 11382 14458 11205 12643 14871 TRUE FALSE 10508.63263 14118.27264 11912.33777 11850.62022 13159.18696 11815.14999 12559.64723 12669.53197 13742.66529 14385.76049 0.730488502 0.981406068 0.828064514 0.823774331 0.91473697 0.821308682 0.873061055 0.880699493 0.955296406 1 13.81235387 -8.3355488 1.734807483 1.000328527 0.856725349 0.396095084 0.061807231 0.345372252 2.055034904 0.054360232 0.015954066 4.62E-09 8.3355488 -0.143603178 AS(ph)LENSLR ddPTM_A459_MK2206_30min_R1 2 ASLENSLR 8 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 AS(1)LENSLR;AS(0.996)LENS(0.004)LR 106.16 0.013847 20596800 4619.7 4543.3 5646.6 4189.1 5281.4 5464.5 8319.1 5543.4 4895.7 4055.6 TRUE FALSE 4226.770256 4247.530344 5263.324524 4511.745208 5071.030654 5773.895268 7764.148018 5494.934638 5404.625534 4558.038346 0.927322224 0.931876834 1.154734586 0.989843627 1.112546729 1.266750042 1.703396819 1.205548137 1.185734986 1 12.15419735 -6.653709502 3.07469933 1.313898722 1.010207642 0.333009022 0.177230384 0.277462793 5.250365471 0.063934994 0.063138871 2.22E-07 6.653709502 -0.30369108 AS(ph)LGSLEGEAEAEASSPK ddPTM_A459_MK2206_30min_R1 1 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 AS(0.5)LGS(0.5)LEGEAEAEASSPK 121.03 0.0011257 0 686.91 802 619.47 832.82 712 689.35 769.51 554.82 687.75 658.77 TRUE FALSE 628.4846974 749.7896542 577.4221023 896.9639407 683.6395323 728.3804013 718.177392 549.9692672 759.2440736 740.3834011 0.848863841 1.012704571 0.779896067 1.211485751 0.923358805 0.98378813 0.970007419 0.742816852 1.025474197 1 9.532128741 -10.24459384 14.39361878 1.000001701 0.944683661 0.016949832 0.127298511 0 0 0.117965874 0.028610927 5.69E-11 10.24459384 -0.055318039 AS(ph)LGSLEGEAEAEASSPK ddPTM_A459_MK2206_30min_R2 2 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 AS(0.5)LGS(0.5)LEGEAEAEASSPK;AS(0.97)LGS(0.03)LEGEAEAEASSPK 115.39 0.00070372 14643200 33143 42134 42094 44474 44329 45517 50971 41484 48567 46196 TRUE FALSE 35680.45356 40041.68683 43497.39295 40840.33193 42588.42072 47249.18133 44278.44647 46906.10124 52791.26987 44688.6283 0.798423557 0.896015124 0.973343658 0.913886451 0.953003534 1.057297642 0.990821338 1.049620519 1.181313275 1 15.44762014 -4.98015015 0.378815838 1.080146807 0.66358009 0.666785499 0.056856614 3.237142491 0.413563981 0.051970921 0.608743903 1.05E-05 4.98015015 -0.416566717 AS(ph)LSCSALGSSPVHR ddPTM_A459_MK2206_30min_R2 1 ASLSCSALGSSPVHR 15 0 O60269 O60269 GPRIN2 G protein-regulated inducer of neurite outgrowth 2 1 AS(0.479)LS(0.479)CS(0.042)ALGSSPVHR 77.795 0.022623 5913800 9086 12213 10109 14762 14245 18046 18548 12122 16188 13158 TRUE FALSE 9781.631146 11606.52018 10446.02901 13555.89738 13685.66972 18732.75318 16112.62532 13706.38702 17596.00298 12728.65554 0.768473239 0.9118418 0.820670257 1.064990512 1.075185803 1.471699279 1.265854455 1.076813414 1.382392895 1 13.63579242 -6.067918255 1.75271648 1.240801754 0.834563759 0.601057514 0.138165036 0.237355052 1.456145298 0.04562515 0.070982272 8.55E-07 6.067918255 -0.406237995 AS(ph)LSDLSSLDDVEGMSVR ddPTM_A459_MK2206_30min_R1 1 ASLSDLSSLDDVEGMSVR 18 0 H7BYJ1;A0A087WTM5;Q969K3;Q969K3-2 H7BYJ1 RNF34 E3 ubiquitin-protein ligase RNF34 1 AS(0.948)LS(0.05)DLS(0.002)SLDDVEGMSVR 214.54 2.90E-12 2522700 390.17 365.73 484.41 307.44 310.32 304.19 245.24 379.19 332.33 381.02 TRUE FALSE 356.9839926 341.9209105 451.5295988 331.1190821 297.9592973 321.4129749 228.8804871 375.8747818 366.8768928 428.2236342 0.833639165 0.798463427 1.054424751 0.77323869 0.695803019 0.750572713 0.534488218 0.877753472 0.856741346 1 8.742220612 -5.958265242 24.99982897 0.762633009 0.890475899 0.116428166 0.131791452 266.9088317 159881.2333 0.03710086 0.055029416 1.10E-06 5.958265242 0.12784289 AS(ph)LSDLTDLEDIEGLTVR ddPTM_A459_MK2206_30min_R2 2 ASLSDLTDLEDIEGLTVR 18 0 J3KSI3;J3KSU7;K7EN88;Q8WZ73-3;Q8WZ73-2;Q8WZ73 J3KSI3 RFFL;hCG_2039718 E3 ubiquitin-protein ligase rififylin 1 AS(0.996)LS(0.004)DLTDLEDIEGLTVR;AS(0.994)LS(0.006)DLTDLEDIEGLTVR 347.33 1.49E-164 17675000 43248 27400 27728 31725 25872 31224 36970 25589 26789 35127 TRUE FALSE 46559.10013 26039.35584 28652.43768 29132.96602 24856.13528 32412.2512 32115.79459 28933.57016 29119.0588 33980.80887 1.370158677 0.766295939 0.843194692 0.857335861 0.73147568 0.953839896 0.94511566 0.851467965 0.856926594 1 15.05243257 -4.754776224 24.99990412 0.862480824 1.370159536 0.788331349 0.078135159 99.99397337 375139.6241 0.01933173 0.182806264 1.76E-05 4.754776224 0.507678712 AS(ph)LSLIEK ddPTM_A459_MK2206_30min_R2 1 ASLSLIEK 8 0 P52292 P52292 KPNA2 Importin subunit alpha-1 1 AS(0.602)LS(0.398)LIEK 85.29 0.038482 0 21552 17076 19395 19032 19238 16545 18128 13338 16201 16995 TRUE FALSE 23202.03769 16228.03067 20041.61962 17477.02472 18482.61946 17174.63157 15747.77182 15081.3224 17610.1337 16440.45454 1.411277141 0.987079197 1.219042914 1.063049971 1.124215843 1.044656735 0.95786718 0.917330014 1.0711464 1 14.00496257 -1.522878745 0.44238726 0.998292449 7.789911084 0.537793726 0.093479225 70.47781385 0.863285564 0.058779974 430.2294517 0.03 1.522878745 6.791618635 AS(ph)LSSAPVVLVGDHA ddPTM_A459_MK2206_30min_R1 2 ASLSSAPVVLVGDHA 15 0 Q9HBH9 Q9HBH9 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 1 AS(0.999)LS(0.001)S(0.001)APVVLVGDHA;AS(0.995)LS(0.003)S(0.003)APVVLVGDHA 198.29 3.18E-06 2452300 1547.98 1899.32 1706.86 1383.61 2206.4 1504.97 1576.55 1529.11 1172.9 1293.56 TRUE FALSE 1416.316172 1775.673923 1591.003099 1490.175882 2118.514416 1590.180101 1471.381226 1515.741152 1294.827152 1453.815979 0.974205947 1.221388366 1.09436347 1.025009976 1.457209473 1.093797375 1.012082167 1.042594919 0.890640336 1 10.50562895 -7.19723274 3.95898756 0.98815021 1.15734359 0.273088079 0.127930442 0.319866409 10.01875597 0.052240443 0.038802585 6.35E-08 7.19723274 0.16919338 AS(ph)LSSAPVVLVGDHA ddPTM_A459_MK2206_30min_R2 2 ASLSSAPVVLVGDHA 15 0 Q9HBH9 Q9HBH9 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 1 AS(0.998)LS(0.001)S(0.001)APVVLVGDHA;AS(0.999)LS(0.001)SAPVVLVGDHA 184.11 2.10E-05 3463200 19820.9 26952 20896.9 24616 21817 18666.7 21297.4 16716 17234.2 19746.9 TRUE FALSE 21338.40334 25613.60287 21593.59222 22604.79406 20960.35496 19377.07435 18501.0258 18900.83859 18733.19956 19102.56027 1.117044158 1.340846594 1.130403041 1.18333845 1.097253701 1.014370539 0.96851027 0.989440071 0.980664335 1 14.22147839 -6.478364293 1.302199003 0.980024936 1.213605682 0.739708415 0.056832317 0.202984387 0.711265538 0.023025333 0.026866013 3.32E-07 6.478364293 0.233580746 AS(ph)LVSEEEEDEEEDK ddPTM_A459_MK2206_30min_R1 2 ASLVSEEEEDEEEDK 15 0 Q96GN5-5;Q96GN5-2;Q96GN5;C9J8L0;C9IZR6;Q96GN5-4;C9JFL7 Q96GN5-5 CDCA7L Cell division cycle-associated 7-like protein 1 AS(0.5)LVS(0.5)EEEEDEEEDK;AS(0.789)LVS(0.211)EEEEDEEEDK 113.69 0.002699 706730000 7503.9 2571.69 2418.21 1649.59 11791.9 12355.3 12008.5 7501.7 2480.67 3281.75 TRUE FALSE 6865.6539 2404.272514 2254.068643 1776.641708 11322.20365 13054.84641 11207.43488 7436.113428 2738.544524 3688.317966 1.861459333 0.651861509 0.611137289 0.481694291 3.069747174 3.539512192 3.03863034 2.016125913 0.742491442 1 11.84874732 -1.536609555 18.79738403 1.762407977 35.26061713 0 1.113131776 0 6.39E-17 0.287609676 0 0.029066346 1.536609555 33.49820915 AS(ph)LYNAVTIEDVQK ddPTM_A459_MK2206_30min_R1 2 ASLYNAVTIEDVQK 14 0 Q9Y617-2;Q9Y617 Q9Y617-2 PSAT1 Phosphoserine aminotransferase 1 AS(0.97)LYNAVT(0.03)IEDVQK;AS(0.512)LYNAVT(0.488)IEDVQK 126.91 0.0012588 5212100 2791.5 2762 3210.6 2453.3 2917 2636.5 3039.5 2706.2 3063.3 3104.9 TRUE FALSE 2554.068266 2582.193298 2992.673417 2642.253591 2800.809713 2785.776352 2836.740501 2682.539979 3381.740997 3489.558453 0.731917319 0.739977087 0.857608049 0.757188517 0.80262582 0.798317721 0.812922477 0.768733356 0.969102837 1 11.76882878 -8.305045301 5.038203099 0.993209014 0.78568038 0.834808859 0.03577027 0.078788626 4.724449988 0.033202337 0.009053922 4.95E-09 8.305045301 -0.207528634 AS(ph)LYNAVTIEDVQK ddPTM_A459_MK2206_30min_R2 2 ASLYNAVTIEDVQK 14 0 Q9Y617-2;Q9Y617 Q9Y617-2 PSAT1 Phosphoserine aminotransferase 1 AS(1)LYNAVTIEDVQK;AS(1)LYNAVTIEDVQK 192.24 0.00011016 6391300 45472 44683 39274 40326 53109 39858 53805 39883 36620 44703 TRUE FALSE 48953.37128 42464.1072 40583.37556 37031.2368 51023.67381 41374.82412 46740.33887 45095.84504 39805.14141 43244.34477 1.132017875 0.981957466 0.938466654 0.856325538 1.179892402 0.956768436 1.080842804 1.042814853 0.920470448 1 15.40022386 -4.757320418 24.90338951 0.997741448 1.132018082 0.185732931 0.085750925 211.0445367 1275801.065 0.021293589 0.159662468 1.75E-05 4.757320418 0.134276633 AS(ph)PAAAEEVVPEWASCLK ddPTM_A459_MK2206_30min_R1 1 ASPAAAEEVVPEWASCLK 18 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 AS(1)PAAAEEVVPEWASCLK 133.86 0.00041468 2065800 500.76 500.16 461.45 306.75 441.01 399.31 426.96 343.77 429.7 441.97 TRUE FALSE 458.1677324 467.5994931 430.1280597 330.3759382 423.4436378 421.9185871 398.4782774 340.7644551 474.3688527 496.7245803 0.922377814 0.941365722 0.865928679 0.665108898 0.852471681 0.849401467 0.802211715 0.686022936 0.954993716 1 8.95630233 -5.520850072 24.99165207 0.813529874 0.924815652 0.129213306 0.098122941 118.6131396 1461220.209 0.025312912 0.044759475 3.01E-06 5.520850072 0.111285778 AS(ph)PAAAEEVVPEWASCLK ddPTM_A459_MK2206_30min_R2 1 ASPAAAEEVVPEWASCLK 18 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 AS(1)PAAAEEVVPEWASCLK 132.51 0.000667 0 3647.1 3765.7 4053 4013.8 5097.2 2960 4908 3204 3867.9 4668.3 TRUE FALSE 3926.32478 3578.700814 4188.124997 3685.8597 4897.058317 3072.644874 4263.573704 3622.773801 4204.32295 4515.973753 0.869430381 0.792453856 0.927402422 0.816182711 1.084385912 0.680394759 0.944109496 0.80221321 0.930989235 1 12.14082139 -8.525199633 12.6360251 0.999999991 0.866491562 0.152051224 0.101979191 0.470855065 2515.316707 0.09086603 0.023463058 2.98E-09 8.525199633 -0.133508429 AS(ph)PAPGSGHPEGPGAHLDMNSLDR ddPTM_A459_MK2206_30min_R1 10 ASPAPGSGHPEGPGAHLDMNSLDR 24 0 O94826 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 1 AS(1)PAPGSGHPEGPGAHLDMNSLDR;AS(0.995)PAPGS(0.005)GHPEGPGAHLDMNSLDR;AS(0.998)PAPGS(0.002)GHPEGPGAHLDMNSLDR;AS(0.999)PAPGS(0.001)GHPEGPGAHLDMNSLDR;AS(0.976)PAPGS(0.024)GHPEGPGAHLDMNSLDR;AS(0.995)PAPGS(0.005)GHPEGPGAHLDMNSLDR;AS(0.957)PAPGS(0.043)GHPEGPGAHLDMNSLDR;AS(0.982)PAPGS(0.018)GHPEGPGAHLDMNSLDR;AS(0.738)PAPGS(0.262)GHPEGPGAHLDMNSLDR;AS(0.852)PAPGS(0.148)GHPEGPGAHLDMNSLDR 128.67 6.59E-08 511433900 12926.26 9159.26 9258.64 8527.18 14823.5 12810.7 13548.94 10952.17 9354.68 8977.85 TRUE FALSE 11826.81371 8562.990509 8630.189313 9183.944881 14233.04861 13536.03076 12645.11493 10856.41633 10327.13246 10090.09384 1.17212128 0.848653209 0.855313087 0.910194199 1.410596258 1.341516836 1.253220747 1.075948005 1.023492212 1 13.30065197 -6.230591867 24.8712324 1.199250406 0.933057916 0.372668211 0.149818969 668.6086684 539074.7696 0.046600068 0.060153669 5.88E-07 6.230591867 -0.266192489 AS(ph)PAPGSGHPEGPGAHLDMNSLDR ddPTM_A459_MK2206_30min_R2 8 ASPAPGSGHPEGPGAHLDMNSLDR 24 0 O94826 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 1 AS(0.992)PAPGS(0.008)GHPEGPGAHLDMNSLDR;AS(0.985)PAPGS(0.015)GHPEGPGAHLDMNSLDR;AS(0.966)PAPGS(0.034)GHPEGPGAHLDMNSLDR;AS(0.986)PAPGS(0.014)GHPEGPGAHLDMNSLDR;AS(0.917)PAPGS(0.083)GHPEGPGAHLDMNSLDR;AS(0.991)PAPGS(0.009)GHPEGPGAHLDMNSLDR;AS(0.982)PAPGS(0.018)GHPEGPGAHLDMNSLDR;AS(0.98)PAPGS(0.02)GHPEGPGAHLDMNSLDR 113.33 1.45E-07 252902000 158694.4 120718.1 136943.5 138349 136901.5 187295 237618 138322.4 197370.9 186721.3 TRUE FALSE 170844.1653 114723.4147 141509.1279 127045.4441 131526.0592 194422.6425 206418.4712 156401.6126 214537.8641 180628.5993 0.945831203 0.635134276 0.783425928 0.703351765 0.728157444 1.076366883 1.142778453 0.865874027 1.187729213 1 17.46266681 -6.761172964 24.99997093 1.051681171 0.750534069 0.644878238 0.109489396 4.311951446 404641.048 0.035306082 0.033231093 1.73E-07 6.761172964 -0.301147102 AS(ph)PATPAGHPVSGLLLR ddPTM_A459_MK2206_30min_R2 2 ASPATPAGHPVSGLLLR 17 0 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 AS(0.997)PAT(0.003)PAGHPVSGLLLR;AS(0.988)PAT(0.012)PAGHPVSGLLLR 71.286 0.019875 7839900 40501 50786 37365 44027 43729 40860 38318 35814 36903 42501 TRUE FALSE 43601.7877 48264.04109 38610.73045 40429.85326 42011.97974 42414.95593 33286.80057 40495.01277 40112.75623 41114.19585 1.060504451 1.173902106 0.939109465 0.983355078 1.021836348 1.031637736 0.809618184 0.98493992 0.975642486 1 15.32734899 -5.268230072 24.99779821 0.966778744 1.117203281 0.464354547 0.063968274 415.2787384 1528723.831 0.016978505 0.036680784 5.39E-06 5.268230072 0.150424537 AS(ph)PDMDGYPALK ddPTM_A459_MK2206_30min_R1 2 ASPDMDGYPALK 12 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 AS(1)PDMDGYPALK;AS(1)PDMDGYPALK 150.14 0.00055722 11364700 4184.9 4340.8 4020.4 3410.5 3516 3144.6 4449.2 3377.2 3955.5 4848 TRUE FALSE 3828.952279 4058.213131 3747.506449 3673.177301 3375.950275 3322.644534 4152.401986 3347.673496 4366.68838 5448.606841 0.702739689 0.744816657 0.687791679 0.674149816 0.619598803 0.609815432 0.762103434 0.614409076 0.801432092 1 12.41167168 -8.572956309 4.027261542 0.999844857 0.678774916 0.802044678 0.049584194 0.106901329 5.252190318 0.048868777 0.012800148 2.67E-09 8.572956309 -0.321069941 AS(ph)PDSPLTR ddPTM_A459_MK2206_30min_R2 1 ASPDSPLTR 9 0 F5GX43;A0A087WXP8;A0A1B0GX50;J3QQJ3;J3QRK4;E7ES00;Q9Y2T1 F5GX43 AXIN2 Axin-2 1 AS(0.999)PDS(0.001)PLTR 98.04 0.020054 5144800 12842 18111 18435 23337 23943 23214 19348 15936 19467 17479 TRUE FALSE 13825.19339 17211.63408 19049.6137 21430.29245 23002.87752 24097.42504 16807.58436 18018.88992 21160.20447 16908.66166 0.81763972 1.017918178 1.126618657 1.267415061 1.360419765 1.425152713 0.994022158 1.065660327 1.25144171 1 14.04547485 -4.95636296 1.72243035 1.203703169 0.762802599 0.420840396 0.136866672 0.660560768 2.56979669 0.041287787 0.433229241 1.11E-05 4.95636296 -0.44090057 AS(ph)PDSSSCGER ddPTM_A459_MK2206_30min_R2 2 ASPDSSSCGER 11 0 Q9BRK4 Q9BRK4 LZTS2 Leucine zipper putative tumor suppressor 2 1 AS(0.995)PDS(0.002)S(0.002)S(0.002)CGER;AS(0.983)PDS(0.006)S(0.006)S(0.006)CGER 96.756 0.019601 2453000 21173 16177.9 16592.8 15674.5 16283.2 11369.6 18578.4 19502.4 13034.6 19985.2 TRUE FALSE 22794.02116 15374.52901 17145.99567 14393.84321 15643.83975 11802.2781 16139.03376 22051.43064 14168.32595 19333.08456 1.179016265 0.795244492 0.886873257 0.744518712 0.809174537 0.610470515 0.83478835 1.140605917 0.732853876 1 14.23878421 -10.14298788 21.49458498 0.999999911 0.853597457 0.058781219 0.167540645 0 0 0.162289804 0.039361059 7.19E-11 10.14298788 -0.146402455 AS(ph)PEPEGEAAGK ddPTM_A459_MK2206_30min_R1 1 ASPEPEGEAAGK 12 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 AS(1)PEPEGEAAGK 151.16 0.0014144 0 1612.9 1709.2 1692.4 1430.6 1752.9 1203.3 1761.4 1618.7 1378 1142.6 TRUE FALSE 1475.714385 1597.930769 1577.524603 1540.78506 1683.078281 1271.429806 1643.90022 1604.547877 1521.248031 1284.153914 1.149172517 1.244345208 1.22845446 1.199844538 1.310651521 0.990091446 1.28014267 1.249498101 1.184630607 1 10.32660241 AS(ph)PEPEGEAAGK ddPTM_A459_MK2206_30min_R2 3 ASPEPEGEAAGK 12 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 AS(1)PEPEGEAAGK;AS(1)PEPEGEAAGK;AS(1)PEPEGEAAGK 150.14 0.00055722 28396000 94452 109855 108671 104815 113556 86516 97251 103525 98292 96816 TRUE FALSE 101683.3177 104399.7604 112294.0369 96251.27921 109097.2209 89808.427 84481.82688 117056.073 106841.2605 93656.90185 1.085700207 1.114704399 1.198993717 1.027700867 1.16486045 0.958908796 0.90203525 1.249839261 1.140772953 1 16.51509769 -5.777929083 24.99280697 1.06699986 1.131289974 0.091468487 0.100158438 678.262823 1028015.219 0.02991098 0.044509146 1.67E-06 5.777929083 0.064290114 AS(ph)PEPPDSAEGALK ddPTM_A459_MK2206_30min_R1 2 ASPEPPDSAEGALK 14 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 AS(1)PEPPDSAEGALK;AS(1)PEPPDSAEGALK 135.14 0.00060576 17595400 3916 4815.3 4640.4 4071.2 4373.5 3542.7 4037.1 4230.3 3958.4 4250.2 TRUE FALSE 3582.923636 4501.823095 4325.422577 4384.764529 4199.294234 3743.284612 3767.792425 4193.314933 4369.889845 4776.746863 0.750076095 0.942445397 0.90551639 0.917939479 0.879111737 0.783647264 0.788777914 0.877859986 0.914825502 1 12.22181271 -8.562750404 2.225106109 0.999091263 0.858243633 0.361602653 0.059756929 0.412026083 4.752542249 0.06064441 0.016675618 2.74E-09 8.562750404 -0.14084763 AS(ph)PEPPDSAEGALK ddPTM_A459_MK2206_30min_R2 4 ASPEPPDSAEGALK 14 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 AS(1)PEPPDSAEGALK;AS(0.983)PEPPDS(0.017)AEGALK;AS(1)PEPPDSAEGALK;AS(0.998)PEPPDS(0.002)AEGALK 105.58 0.0057951 20665300 142785 158861.5 155555.7 152104.6 164517.1 130015.3 175249 132513 139286.4 155096.3 TRUE FALSE 153716.7294 150972.6689 160741.8494 139677.1676 158057.332 134963.1233 152238.5958 149832.9041 151401.2793 150035.5204 1.024535583 1.006246177 1.071358629 0.930960663 1.053466083 0.899541142 1.014683692 0.998649544 1.009102904 1 17.19494457 -5.748459895 24.99994425 0.986898014 1.031266712 0.197868352 0.043640678 394.4864687 759818.6775 0.011222994 0.01928521 1.78E-06 5.748459895 0.044368698 AS(ph)PEPPGPESSSR ddPTM_A459_MK2206_30min_R1 3 ASPEPPGPESSSR 13 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 AS(1)PEPPGPESSSR;AS(1)PEPPGPESSSR;AS(1)PEPPGPESSSR 162.88 0.0003632 454076000 5214.8 5503.7 5416.5 3856.62 4662.9 4882.7 5879.9 4870.5 4918.2 4930.7 TRUE FALSE 4771.253876 5145.40813 5048.843071 4153.657541 4477.166819 5159.154254 5487.662599 4827.917732 5429.46449 5541.552341 0.860995906 0.928513856 0.911088222 0.749547651 0.80792647 0.93099441 0.990275335 0.871221173 0.979773204 1 12.43607446 -6.899411828 6.39544359 0.951032091 0.853885806 0.446908846 0.057501601 0.240973251 13.18099905 0.021953661 0.019351202 1.26E-07 6.899411828 -0.097146284 AS(ph)PEPPGPESSSR ddPTM_A459_MK2206_30min_R2 5 ASPEPPGPESSSR 13 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 AS(1)PEPPGPESSSR;AS(1)PEPPGPESSSR;AS(0.999)PEPPGPES(0.001)SSR;AS(1)PEPPGPESSSR;AS(0.991)PEPPGPES(0.003)S(0.003)S(0.002)R 129.37 0.0017325 1155197700 183280.4 193190.6 177553.6 218345.9 197210.1 161425.2 198691.3 172600.2 174831.9 181220.8 TRUE FALSE 197312.4883 183597.0357 183473.1484 200506.3415 189466.6406 167568.3491 172602.8936 195159.6388 190038.4626 175307.5801 1.125521716 1.047285209 1.046578524 1.143740284 1.080766961 0.955853415 0.984571765 1.113241302 1.084028782 1 17.41952885 -6.556621191 24.99985663 1.030417709 1.08798434 0.263627204 0.051195173 308.5033498 228569.0387 0.018250308 0.018250412 2.78E-07 6.556621191 0.057566632 AS(ph)PEPQRENAS(ph)PAPGTTAEEAMSR ddPTM_A459_MK2206_30min_R1 1 ASPEPQRENASPAPGTTAEEAMSR 24 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 2 AS(1)PEPQRENAS(0.906)PAPGT(0.044)T(0.048)AEEAMS(0.003)R 62.034 0.029338 0 934.9 823.61 921.26 739.33 657.82 832.27 848.58 678.98 636.82 741.66 TRUE FALSE 855.3818456 769.9928393 858.727438 796.2733247 631.6176364 879.3924082 791.9727765 673.0437494 703.0197179 833.54244 1.026200712 0.92375961 1.030214416 0.955288281 0.757751023 1.055006159 0.950128918 0.807449888 0.843412026 1 9.703111846 -6.010025762 24.58791136 0.898494016 0.987482228 0.181668543 0.087168263 695.6025415 1705954.925 0.02538944 0.035248279 9.77E-07 6.010025762 0.088988212 AS(ph)PEPQRENAS(ph)PAPGTTAEEAMSR ddPTM_A459_MK2206_30min_R2 2 ASPEPQRENASPAPGTTAEEAMSR 24 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 2 AS(0.999)PEPQRENAS(0.725)PAPGT(0.164)T(0.11)AEEAMS(0.002)R;AS(1)PEPQRENAS(0.94)PAPGT(0.027)T(0.031)AEEAMS(0.002)R 65.883 0.0053447 52485000 46911 66621 63247 78794 74232 70318 65359 51060 67063 63767 TRUE FALSE 50502.54223 63312.69802 65355.62341 72356.27815 71317.27869 72994.00076 56777.28479 57733.71732 72896.01852 61686.28801 0.818699647 1.026365827 1.059483809 1.17297183 1.15612855 1.183309989 0.920419863 0.935924647 1.181721593 1 15.91266221 -4.716752441 2.391002853 1.078092361 0.728942058 0.401569192 0.094033399 0.795840802 4.778103658 0.026404621 0.62184925 1.92E-05 4.716752441 -0.349150303 AS(ph)PEPQRENASPAPGTTAEEAMSR ddPTM_A459_MK2206_30min_R2 1 ASPEPQRENASPAPGTTAEEAMSR 24 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 AS(0.555)PEPQRENAS(0.435)PAPGT(0.004)T(0.006)AEEAMSR 63.768 0.0066105 5630000 3863.7 7743 3398.5 6981 6116.4 5415.9 4915.2 3014.3 7252.8 5174.1 TRUE FALSE 4159.507843 7358.493879 3511.804294 6410.629969 5876.239404 5622.00587 4269.828336 3408.27936 7883.635434 5005.269541 0.831025744 1.470149373 0.701621414 1.280776173 1.174010581 1.123217406 0.853066613 0.680938226 1.575067111 1 12.28923205 -8.270185247 24.99940245 1.287533453 1.031575269 0.13461005 0.27429673 1501.91302 4293052.555 0.240026317 0.065744786 5.37E-09 8.270185247 -0.255958184 AS(ph)PFEEDQNR ddPTM_A459_MK2206_30min_R1 2 ASPFEEDQNR 10 0 Q8TB72-3;Q8TB72;C9JW01;Q8TB72-2;Q8TB72-4;A0A0A0MR59;A0A0C4DG68 Q8TB72-3 PUM2 Pumilio homolog 2 1 AS(1)PFEEDQNR;AS(1)PFEEDQNR 190.66 0.00017959 20219800 3014.5 2460.6 2904.9 2355.3 2897.2 2894.8 3304.2 2836.2 2165.7 2871 TRUE FALSE 2758.100945 2300.414493 2707.723482 2536.705614 2781.798389 3058.701074 3083.782847 2811.403402 2390.832265 3226.681155 0.854779513 0.712935175 0.839166732 0.786165565 0.862123729 0.947940291 0.955713533 0.871298795 0.740957086 1 11.65583531 -6.413454804 3.914193601 0.899062854 0.795369135 0.309190581 0.073525115 0.310306267 8.366363625 0.023975207 0.027107197 3.86E-07 6.413454804 -0.103693718 AS(ph)PFEEDQNR ddPTM_A459_MK2206_30min_R2 2 ASPFEEDQNR 10 0 Q8TB72-3;Q8TB72;C9JW01;Q8TB72-2;Q8TB72-4;A0A0A0MR59;A0A0C4DG68 Q8TB72-3 PUM2 Pumilio homolog 2 1 AS(1)PFEEDQNR;AS(1)PFEEDQNR 163.45 0.00039198 51647000 63299 50587 66058 60708 56434 59670 70639 49858 59552 65488 TRUE FALSE 68145.22011 48074.92314 68260.34075 55747.9622 54218.1176 61940.78366 61364.01445 56374.61179 64731.72531 63351.13192 1.075674862 0.75886447 1.077492046 0.87998368 0.855835025 0.9777376 0.968633276 0.889875367 1.021792719 1 15.95108278 -8.276799943 24.10079365 1.010896387 0.932361169 0.095141778 0.092584954 1299.771276 2039315.734 0.080857014 0.021244427 5.29E-09 8.276799943 -0.078535218 AS(ph)PGGVSTSSSDGK ddPTM_A459_MK2206_30min_R1 4 ASPGGVSTSSSDGK 14 0 P54259 P54259 ATN1 Atrophin-1 1 AS(1)PGGVSTSSSDGK;AS(1)PGGVSTSSSDGK;AS(1)PGGVSTSSSDGK;AS(1)PGGVSTSSSDGK 198.16 8.67E-15 19963300 9766.5 9228 9291.3 7804.7 8457 7411.9 9466.7 8116.6 9907.4 10947.4 TRUE FALSE 8935.807889 8627.255523 8660.632443 8405.819346 8120.139782 7831.555373 8835.193716 8045.637422 10937.30968 12303.64656 0.726273129 0.701195006 0.703907772 0.6831974 0.659978303 0.63652311 0.71809554 0.653922996 0.888948624 1 13.58679835 -8.427514515 3.296975483 0.997755517 0.684995809 0.931706929 0.028738035 0.052477911 1.074735178 0.028445803 0.007577142 3.74E-09 8.427514515 -0.312759707 AS(ph)PGGVSTSSSDGK ddPTM_A459_MK2206_30min_R2 3 ASPGGVSTSSSDGK 14 0 P54259 P54259 ATN1 Atrophin-1 1 AS(1)PGGVSTSSSDGK;AS(1)PGGVSTSSSDGK;AS(1)PGGVSTSSSDGK 172.43 0.00012279 43599200 88744 72323 78996 82027 77370 58232 85147 75018 59386 85429 TRUE FALSE 95538.30887 68731.54499 81629.68721 75325.13171 74332.06505 60448.05957 73967.09662 84823.11018 64551.28693 82641.45873 1.156057871 0.831683589 0.987757095 0.911469048 0.899452481 0.731449571 0.895036193 1.026398995 0.781100527 1 16.3345781 -4.752815129 24.99741522 0.895143933 1.156058364 0.429201595 0.089952181 319.8432725 926996.7953 0.021999183 0.252186809 1.77E-05 4.752815129 0.260914431 AS(ph)PGLLPVANGNSLNK ddPTM_A459_MK2206_30min_R1 2 ASPGLLPVANGNSLNK 16 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 AS(1)PGLLPVANGNSLNK;AS(1)PGLLPVANGNSLNK 227 4.46E-15 66584000 8126.1 8722.3 8869.3 7669.8 8188.8 8364.4 8200.1 7761 6692.1 7115.8 TRUE FALSE 7434.932523 8154.476685 8267.276627 8260.529325 7862.622756 8837.9851 7653.086291 7693.146395 7387.767743 7997.359026 0.929673471 1.019646193 1.033750842 1.032907151 0.983152405 1.105112959 0.956951697 0.961960864 0.923775926 1 12.96530794 -7.418618843 23.15248252 0.957464072 1.018511118 0.276636658 0.044774997 22.90482534 5073.437406 0.018282724 0.012326194 3.81E-08 7.418618843 0.061047047 AS(ph)PGLLPVANGNSLNK ddPTM_A459_MK2206_30min_R2 2 ASPGLLPVANGNSLNK 16 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 AS(1)PGLLPVANGNSLNK;AS(1)PGLLPVANGNSLNK 201.04 6.40E-07 37616000 48520 63334 57577 65563 59882 54014 56215 49194 60581 64321 TRUE FALSE 52234.72851 60188.92566 59496.58844 60206.29317 57530.7318 56069.54062 48833.90297 55623.82471 65850.22587 62222.21104 0.839486859 0.967322193 0.956195343 0.967601314 0.924601213 0.901117779 0.784830725 0.893954486 1.058307392 1 15.92514204 -8.256789397 24.91113022 1.029153702 0.906899941 0.44163577 0.056058176 351.7178895 1884267.524 0.044281341 0.015519355 5.54E-09 8.256789397 -0.122253761 AS(ph)PHDVLETIFVR ddPTM_A459_MK2206_30min_R2 2 ASPHDVLETIFVR 13 0 H0YEM7;O75143-4;O75143-3;O75143-2;O75143;O75143-5;H0YCL5 H0YEM7 ATG13 Autophagy-related protein 13 1 AS(1)PHDVLETIFVR;AS(1)PHDVLETIFVR 99.844 0.0086247 1227500 7216.9 5937.9 6285.4 5487.9 4992.1 6090.5 6346.4 6575.2 3964.1 6869.3 TRUE FALSE 7769.431413 5643.032521 6494.952099 5039.521015 4796.085071 6322.278245 5513.110057 7434.601216 4308.890253 6645.155304 1.169187334 0.849194979 0.977396585 0.758375205 0.721741607 0.951411661 0.829643523 1.11880022 0.648425816 1 12.6980872 -3.394362836 8.877070728 0.896641516 0.955809247 0 0.161832731 0 0 0.035074857 0 0.000403308 3.394362836 0.059167731 AS(ph)PIKMDLAPSK ddPTM_A459_MK2206_30min_R1 1 ASPIKMDLAPSK 12 1 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 AS(0.998)PIKMDLAPS(0.002)K 142.57 0.0042617 63978000 2133.6 2554.3 2079.8 1543.5 1563.1 1592.7 2180.3 1660.5 1938.2 2255.9 TRUE FALSE 1952.126116 2388.014606 1938.628971 1662.380637 1500.838417 1682.877298 2034.856165 1645.982424 2139.682826 2535.377923 0.769954687 0.941877179 0.764631163 0.655673705 0.591958462 0.663757968 0.802584951 0.649205946 0.843930527 1 11.3079851 -8.549299478 5.317139442 0.999933834 0.731744792 0.445363103 0.094090687 0.186001395 23.20423483 0.100608244 0.026132721 2.82E-09 8.549299478 -0.268189042 AS(ph)PLLSDK ddPTM_A459_MK2206_30min_R1 2 ASPLLSDK 8 0 C9J637;A0A590UJ51;H0Y7H7;H0Y599;Q8N1I0-2;Q8N1I0;Q8N1I0-3;A0A590UJM5 C9J637 DOCK4 Dedicator of cytokinesis protein 4 1 AS(0.999)PLLS(0.001)DK;AS(0.999)PLLS(0.001)DK 84.817 0.036143 13614300 10766 9366.3 9910.3 8575.5 9146.5 7645.1 10041.1 9003.8 9733.3 9675.8 TRUE FALSE 9850.295165 8756.552168 9237.616448 9235.986496 8782.175537 8077.958955 9371.27654 8925.080726 10745.11137 10874.51115 0.905814986 0.805236396 0.84947418 0.849324293 0.807592674 0.742834215 0.861765316 0.820733971 0.988100634 1 13.40866293 -8.269803193 8.959489714 0.994552907 0.82811808 0.722937163 0.04051887 0.092090095 73.66120922 0.034078762 0.01024387 5.37E-09 8.269803193 -0.166434826 AS(ph)PLLSDK ddPTM_A459_MK2206_30min_R2 2 ASPLLSDK 8 0 C9J637;A0A590UJ51;H0Y7H7;H0Y599;Q8N1I0-2;Q8N1I0;Q8N1I0-3;A0A590UJM5 C9J637 DOCK4 Dedicator of cytokinesis protein 4 1 AS(0.999)PLLS(0.001)DK;AS(1)PLLSDK 106.4 0.013744 19991400 116360 104441 107651 109568 110046 92334 118562 85229 104335 105453 TRUE FALSE 125268.6111 99254.61181 111240.0306 100615.9439 105725.0411 95847.83507 102994.667 96368.72293 113409.8697 102012.0772 1.22797824 0.972969226 1.09045942 0.986314039 1.036397297 0.939573408 1.009632092 0.944679547 1.111729834 1 16.63838044 -4.755702883 24.996016 1.008822508 1.227978592 0.59707152 0.05366118 122.369779 533155.6684 0.012570439 0.108864286 1.76E-05 4.755702883 0.219156085 AS(ph)PLPSGLLTPPQSGK ddPTM_A459_MK2206_30min_R2 2 ASPLPSGLLTPPQSGK 16 0 I3L413;C9J2U0;P24864-2;P24864-3;P24864 I3L413 CCNE1 G1/S-specific cyclin-E1 1 AS(1)PLPSGLLTPPQSGK;AS(0.997)PLPS(0.002)GLLT(0.001)PPQSGK 146.3 0.00035057 10221000 57464 47141 45113 49995 37225 40644 54440 45129 31674 58769 TRUE FALSE 61863.48802 44800.04649 46617.0449 45910.24857 35763.35946 42190.7359 47291.96261 51027.51525 34428.94727 56851.37234 1.088161736 0.788020493 0.819980996 0.807548643 0.629067655 0.742123438 0.831852612 0.897559956 0.605595711 1 15.79490755 -4.761247819 7.625951445 0.783878465 1.092794393 0.393915214 0.110132634 0.09791365 42.77153579 0.026236607 0.155854369 1.73E-05 4.761247819 0.308915929 AS(ph)PNGSISSAGNSSR ddPTM_A459_MK2206_30min_R2 1 ASPNGSISSAGNSSR 15 0 E9PKU9;B7Z503;Q9BSF8;Q9BSF8-2 E9PKU9 BTBD10 BTB/POZ domain-containing protein 10 1 AS(0.916)PNGS(0.069)IS(0.014)SAGNSSR 104.16 0.0051849 2607300 2630.5 2960.2 2700.2 3000.4 1893.3 1188 1912.1 2017.8 2400.8 2271.3 TRUE FALSE 2831.893103 2813.200773 2790.22332 2755.257722 1818.959529 1233.210172 1661.038973 2281.533388 2609.617244 2197.187667 1.288871745 1.280364356 1.269906691 1.253992894 0.827858064 0.561267565 0.755984115 1.038388037 1.187707943 1 11.10144238 -6.254802585 21.50520237 0.873462816 1.273548662 0.570653772 0.159995579 61.73894977 200049.7538 0.053582538 0.067263638 5.56E-07 6.254802585 0.400085845 AS(ph)PNLIGATGANSLGK ddPTM_A459_MK2206_30min_R1 2 ASPNLIGATGANSLGK 16 0 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3 MEF2A Myocyte-specific enhancer factor 2A 1 AS(1)PNLIGATGANSLGK;AS(1)PNLIGATGANSLGK 206.63 7.79E-08 25678000 3115.2 4868.9 3921 3540.5 4162.9 3751.2 3890.2 3645.8 3226.6 3141.3 TRUE FALSE 2850.235881 4551.933725 3654.853445 3813.189923 3997.082878 3963.589702 3630.691856 3613.925155 3562.016617 3530.46796 0.807325237 1.289328717 1.035232011 1.080080592 1.132168008 1.122681114 1.028388275 1.023639131 1.008936112 1 11.78564371 -7.408392707 5.543656603 1.014735427 1.087878482 0.06643984 0.112095828 0.599157481 25.12116243 0.045147066 0.029916487 3.90E-08 7.408392707 0.073143055 AS(ph)PNLIGATGANSLGK ddPTM_A459_MK2206_30min_R2 1 ASPNLIGATGANSLGK 16 0 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3 MEF2A Myocyte-specific enhancer factor 2A 1 AS(1)PNLIGATGANSLGK 134.52 0.00044522 8654200 15171 19572 15153 17490 16763 17008 15007 15345 19472 19230 TRUE FALSE 16332.50342 18600.08294 15658.19346 16061.01105 16104.80039 17655.25136 13036.56287 17350.64419 21165.63936 18602.52667 0.877972316 0.999868634 0.841724016 0.863377934 0.86573188 0.949078137 0.700795279 0.932703632 1.137783041 1 14.18321097 -8.06120787 6.648923816 1.061152913 0.873363989 0.493634182 0.078988438 0.207153039 18.25555297 0.052886985 0.019925684 8.69E-09 8.06120787 -0.187788924 AS(ph)PNPVAMETR ddPTM_A459_MK2206_30min_R1 1 ASPNPVAMETR 11 0 H7BXF5;A0A2R8YDB8;Q9H0E3;Q9H0E3-3 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 AS(1)PNPVAMETR 95.981 0.020684 4915500 792.19 568.88 676.59 475.31 648 559.9 904.78 609.56 686.97 737.51 TRUE FALSE 724.8100805 531.8458086 630.6649559 511.9184586 622.1887878 591.6010541 844.4237771 604.2306812 758.3829898 828.8783067 0.874446918 0.641645226 0.760865559 0.61760388 0.750639488 0.713736925 1.018754828 0.728973935 0.914950945 1 9.695016495 -7.231459457 24.52590895 0.893084425 0.720343976 0.461106323 0.098860813 512.5947559 419342.8415 0.035755538 0.027691971 5.87E-08 7.231459457 -0.172740449 AS(ph)PNPVAMETR ddPTM_A459_MK2206_30min_R2 2 ASPNPVAMETR 11 0 H7BXF5;A0A2R8YDB8;Q9H0E3;Q9H0E3-3 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 AS(1)PNPVAMETR;AS(0.999)PNPVAMET(0.001)R 115.83 0.0060651 11302600 19165.4 32261 23920 36504 31419 29242 36471 26352.3 22891.8 29126 TRUE FALSE 20632.71776 30658.96565 24717.48086 33521.50643 30185.33219 30354.8248 31682.31389 29796.63609 24882.88739 28175.62101 0.732289725 1.088138063 0.877264812 1.189734431 1.071328017 1.077343594 1.124458406 1.057532542 0.883135367 1 14.78215979 -4.756872481 24.99472724 1.047014618 0.732289252 0.493874105 0.093574056 115.9549409 634545.53 0.022920082 0.178993627 1.75E-05 4.756872481 -0.314725366 AS(ph)PNSDEDKPEVPPR ddPTM_A459_MK2206_30min_R1 1 ASPNSDEDKPEVPPR 15 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 AS(0.877)PNS(0.123)DEDKPEVPPR 80.508 0.015975 7063200 1016.4 1367 1234.9 1033.1 1166.6 1171.7 1058.5 1189.8 1233.2 1599.9 TRUE FALSE 929.9498427 1278.008052 1151.078429 1112.669541 1120.131852 1238.040641 987.8893963 1179.397704 1361.395553 1798.107691 0.517182507 0.710751674 0.640161006 0.618800279 0.62295037 0.68852419 0.549405023 0.655910494 0.757126817 1 10.81226371 -8.63850666 1.932555827 0.999270368 0.626796713 0.816902575 0.054453454 0.190052205 1.501283084 0.049688978 0.013886712 2.30E-09 8.63850666 -0.372473655 AS(ph)PNVEAPQPHR ddPTM_A459_MK2206_30min_R2 1 ASPNVEAPQPHR 12 0 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494BZW2 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 AS(1)PNVEAPQPHR 93.959 0.013337 0 9236.8 10537 7262.5 10547 9009 12539 10282 9624.2 8819.6 10365 TRUE FALSE 9943.97651 10013.7479 7504.628125 9685.276362 8655.261393 13016.18043 8931.961049 10882.11598 9586.712866 10026.7909 0.991740689 0.998699185 0.748457627 0.965939797 0.863213513 1.298140209 0.890809546 1.085303972 0.956109783 1 13.29157232 AS(ph)PPAESMSVYR ddPTM_A459_MK2206_30min_R1 1 ASPPAESMSVYR 12 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 AS(0.997)PPAES(0.003)MSVYR 104.94 0.0095334 15119000 646.64 492.69 422.11 231.47 480.99 623.87 581.86 492.85 380.47 403.47 TRUE FALSE 591.6398724 460.6157914 393.4583493 249.2978595 461.8311498 659.1929803 543.0451811 488.5410644 420.021218 453.4549096 1.304738045 1.015791828 0.867690129 0.549774309 1.018472046 1.453712301 1.197572613 1.077375179 0.926268983 1 8.82481529 -6.527408143 24.98499139 1.150662186 0.916606938 0.150344496 0.216772872 223.2529599 1231490.585 0.076111172 0.076393189 2.97E-07 6.527408143 -0.234055248 AS(ph)PPAESMSVYR ddPTM_A459_MK2206_30min_R2 1 ASPPAESMSVYR 12 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 AS(1)PPAESMSVYR 136.01 0.0014423 36318000 11879 11995 10275 13071 12395 7622.2 12078 8805.7 10714 11945 TRUE FALSE 12788.46537 11399.34574 10617.56337 12003.05749 11908.31002 7912.268162 10492.14409 9956.635224 11645.88435 11555.23563 1.10672476 0.986509156 0.918853039 1.038754888 1.030555361 0.684734472 0.907999147 0.86165575 1.007844818 1 13.49625906 AS(ph)PPGDLQNPK ddPTM_A459_MK2206_30min_R1 3 ASPPGDLQNPK 11 0 O00273 O00273 DFFA DNA fragmentation factor subunit alpha 1 AS(1)PPGDLQNPK;AS(1)PPGDLQNPK;AS(1)PPGDLQNPK 131.17 0.0022535 40386700 7310.6 7680.9 7300.5 5798.7 5535.6 6140 7125.2 6471.3 7475.2 7656.7 TRUE FALSE 6688.795081 7180.872014 6804.9624 6245.316879 5315.10533 6487.641494 6649.890909 6414.722106 8252.27379 8605.269801 0.777290571 0.834473779 0.790790127 0.725754918 0.617657023 0.753914943 0.772769601 0.745441137 0.958979089 1 13.07100471 -8.310293892 4.090459078 0.995312261 0.750993385 0.744334039 0.053419016 0.121079632 4.119279567 0.055662356 0.015252327 4.89E-09 8.310293892 -0.244318876 AS(ph)PPGDLQNPK ddPTM_A459_MK2206_30min_R2 2 ASPPGDLQNPK 11 0 O00273 O00273 DFFA DNA fragmentation factor subunit alpha 1 AS(1)PPGDLQNPK;AS(1)PPGDLQNPK 142.76 0.00089481 50730000 94315 85250 72807 75920 66583 51263 88422 72785 53065 87827 TRUE FALSE 101535.8289 81016.60897 75234.34904 69717.09314 63968.61687 53213.84939 76812.08519 82298.24941 57680.49778 84961.21218 1.195084513 0.953571717 0.885514073 0.820575547 0.752915539 0.626331099 0.904084149 0.968656723 0.678903894 1 16.37451673 -4.582723744 1.254915598 0.814606143 1.510371842 0.501723536 0.112058348 1.810489032 1.801322185 0.033788122 1.83505879 2.61E-05 4.582723744 0.695765699 AS(ph)PPLFQSR ddPTM_A459_MK2206_30min_R2 1 ASPPLFQSR 9 0 O15055 O15055 PER2 Period circadian protein homolog 2 1 AS(1)PPLFQSR 85.963 0.034475 11872000 57482 74023 55877 62717 63812 49263 54152 50940 54247 72114 TRUE FALSE 61882.86612 70347.12546 57739.91129 57592.82048 61306.42025 51137.73799 47041.77735 57598.0329 58965.306 69760.92609 0.887070594 1.008402976 0.827682695 0.825574196 0.878807431 0.733042705 0.674328453 0.825648915 0.845248326 1 16.09013157 -5.365652918 6.215648786 0.8121537 0.946865871 0.230562372 0.085964122 0.279391374 13.96408094 0.022599716 0.047787148 4.31E-06 5.365652918 0.134712171 AS(ph)PPPQGPLPGPPGALHR ddPTM_A459_MK2206_30min_R1 4 ASPPPQGPLPGPPGALHR 18 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR 143.72 0.00019235 143393000 11114.2 8172.5 9919.2 11274.1 10050.5 10548.1 9359.1 9098.8 7443.5 6666.4 TRUE FALSE 10168.87893 7640.468765 9245.91234 12142.43314 9650.167303 11145.32431 8734.771516 9019.250151 8217.278462 7492.283961 1.357246866 1.019778322 1.234057917 1.620658427 1.288014089 1.487573664 1.16583562 1.203805168 1.096765486 1 12.87118986 -8.065047131 1.293648523 1.018055884 1.321339502 0.33948199 0.153163494 0.563544553 1.715121858 0.14899494 0.049747765 8.61E-09 8.065047131 0.303283618 AS(ph)PPPQGPLPGPPGALHR ddPTM_A459_MK2206_30min_R2 4 ASPPPQGPLPGPPGALHR 18 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR 130.37 0.00038684 265129800 64186.5 91088 72285.4 92249 89739.5 93111.3 95958.5 61804.5 76465.8 90683 TRUE FALSE 69100.66779 86564.70237 74695.35916 84711.96161 86215.87633 96654.71577 83359.03368 69882.56036 83116.65707 87724.02114 0.787705202 0.986784478 0.85148125 0.96566437 0.982808075 1.101804438 0.950241822 0.796618297 0.947478877 1 16.42068432 -4.753308704 24.71392694 0.949914472 0.787704855 0.286325963 0.078398618 383.4434037 1165404.187 0.020811324 0.22448717 1.76E-05 4.753308704 -0.162209617 AS(ph)PPPTYSPSMR ddPTM_A459_MK2206_30min_R1 1 ASPPPTYSPSMR 12 0 B4DKD1;Q9BSA4-2;Q9BSA4 B4DKD1 TTYH2 Protein tweety homolog;Protein tweety homolog 2 1 AS(0.999)PPPT(0.001)YSPSMR 101.56 0.012423 4626300 599.16 440.87 553.27 429.94 699.09 504.41 388.55 606.94 435.43 348.89 TRUE FALSE 548.1982957 412.1692829 515.7155739 463.0540533 671.243765 532.9692583 362.6305384 601.6335876 480.6945067 392.1131272 1.398061574 1.051148901 1.315221394 1.180919539 1.711862517 1.359223197 0.924811013 1.534336766 1.225907712 1 8.615126131 -10.65800206 5.661913038 0.999996203 1.299470623 0.149782712 0.214538382 1.02E-05 1.56E-06 0.206250355 0.050022425 2.20E-11 10.65800206 0.29947442 AS(ph)PQPALTVK ddPTM_A459_MK2206_30min_R2 1 ASPQPALTVK 10 0 Q8N9M1-2;Q8N9M1;Q8N9M1-3;A0A2R8Y6U9;J3QS80 Q8N9M1-2 C19orf47 Uncharacterized protein C19orf47 1 AS(0.997)PQPALT(0.003)VK 81.676 0.044509 4080400 27138 27969 25383 31683 24393 28493 28959 22835 23072 25928 TRUE FALSE 29215.70615 26580.10013 26229.25655 29094.39755 23435.20826 29577.32108 25156.64851 25819.6129 25078.76086 25081.97148 1.164809001 1.059729302 1.045741423 1.159972515 0.934344745 1.179226326 1.002977319 1.029409228 0.999871995 1 14.61436313 -1.522878756 0.155243706 0.981111091 1.520432393 0.238088321 0.06902482 102.9257433 1.042398763 0.214241481 12.59623918 0.029999999 1.522878756 0.539321301 AS(ph)PSKPASAPASR ddPTM_A459_MK2206_30min_R1 1 ASPSKPASAPASR 13 1 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 AS(0.994)PS(0.006)KPASAPASR 156.2 0.0017341 44126000 3904.5 3052.3 3208.7 2938.1 3643.8 3697.9 3710.2 2965.8 2771.6 2684 TRUE FALSE 3572.401772 2853.594715 2990.902384 3164.392971 3498.65973 3907.271902 3462.699328 2939.870323 3059.717738 3016.514183 1.184281444 0.945990817 0.991509472 1.049023071 1.159835332 1.295293728 1.147914154 0.974591911 1.014322344 1 11.55866665 -2.707096437 15.72386398 1.079234592 88.63743392 0 0.108043464 0 0 0.026950353 0 0.001962924 2.707096437 87.55819933 AS(ph)PSKPASAPASR ddPTM_A459_MK2206_30min_R2 2 ASPSKPASAPASR 13 1 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 AS(0.593)PS(0.406)KPASAPASR;AS(0.986)PS(0.014)KPASAPASR 149.35 0.0024775 115426000 145028.5 188842 169939 260206 178059 252994 188554 166701 176497.8 158627 TRUE FALSE 156131.9935 179464.3809 175604.6814 238946.3374 171067.509 262621.864 163796.6333 188489.3931 191849.2596 153451.014 1.01747124 1.169522287 1.144369639 1.557150593 1.114802076 1.711437788 1.067419687 1.228335924 1.250231293 1 17.22741865 -9.288338225 0.969438861 0.998627792 1.263916387 0.115230354 0.207753835 8.643279839 9.129129305 0.231872226 0.063574062 5.15E-10 9.288338225 0.265288595 AS(ph)PSPQPSSQPLQIHR ddPTM_A459_MK2206_30min_R2 2 ASPSPQPSSQPLQIHR 16 0 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 AS(0.923)PS(0.076)PQPSSQPLQIHR;AS(0.934)PS(0.066)PQPSSQPLQIHR 123.63 0.0013516 69671900 7976 13648.2 13776.4 12713.8 7765.1 20032.3 15360.6 8985.3 8556.3 9078.7 TRUE FALSE 8586.648693 12970.45023 14235.6983 11675.04187 7460.203158 20794.64321 13343.73477 10159.70956 9300.511508 8782.462763 0.977703968 1.476857982 1.620923275 1.329358539 0.849443187 2.367746243 1.519361383 1.156817835 1.058986728 1 13.10040984 -7.878761291 4.448716114 1.053909771 1.463284563 0.170693287 0.384860301 0.401648429 13.51001117 0.230293917 0.105247733 1.32E-08 7.878761291 0.409374793 AS(ph)PSTAGETPSGVK ddPTM_A459_MK2206_30min_R1 1 ASPSTAGETPSGVK 14 0 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 AS(0.717)PS(0.257)T(0.026)AGETPSGVK 154.72 0.00033877 13474000 1918.1 2117.6 1723.6 1532.1 1600.1 1850.7 2047 1718.3 2390.9 2608.1 TRUE FALSE 1754.955523 1979.743855 1606.606834 1650.102607 1536.364629 1955.485035 1910.448365 1703.277084 2639.442611 2931.211118 0.59871345 0.675401319 0.548103419 0.562942259 0.524139875 0.667125279 0.651760753 0.581083046 0.900461449 1 11.51728117 -8.360738066 3.456194951 0.995441733 0.600997297 0.89057694 0.049392889 0.072804008 1.535560259 0.04964222 0.013338736 4.36E-09 8.360738066 -0.394444436 AS(ph)PSTAGETPSGVK ddPTM_A459_MK2206_30min_R2 3 ASPSTAGETPSGVK 14 0 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 AS(0.953)PS(0.014)T(0.033)AGETPSGVK;AS(0.913)PS(0.083)T(0.003)AGETPSGVK;AS(0.916)PS(0.083)T(0.001)AGETPSGVK 252.2 1.23E-27 39745200 192590 128778 136670 157020 124059 113105 172271 120721 92774 160857 TRUE FALSE 207334.8385 122383.0718 141226.5096 144190.9637 119187.8203 117409.29 149651.6108 136499.6492 100843.3148 155608.2493 1.332415469 0.786481902 0.907577267 0.926628019 0.765947955 0.754518418 0.961720291 0.877200597 0.648058926 1 17.24755902 -4.757151334 24.99959978 0.846187256 1.332416186 0.666469989 0.102892495 75.47041326 439940.7328 0.024955165 0.189864247 1.75E-05 4.757151334 0.48622893 AS(ph)PSVTCK ddPTM_A459_MK2206_30min_R2 1 ASPSVTCK 8 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 AS(1)PSVTCK 87.806 0.031954 21617000 74731 86129 67412 83127 88427 69211 99279 78246 62937 86051 TRUE FALSE 80452.46282 81851.9591 69659.48243 76335.25819 84954.91167 71844.8731 86243.54804 88473.02086 68411.1465 83243.16292 0.966475324 0.983287471 0.836819265 0.91701535 1.020563235 0.86307236 1.036043622 1.062826276 0.821823007 1 16.34504416 -7.274575843 24.94251883 0.985408741 0.932699285 0.084220687 0.078254392 2026.782119 3848286.517 0.03236648 0.021975978 5.31E-08 7.274575843 -0.052709457 AS(ph)PTGTPSR ddPTM_A459_MK2206_30min_R1 2 ASPTGTPSR 9 0 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 AS(0.986)PT(0.01)GT(0.003)PS(0.001)R;AS(0.994)PT(0.004)GT(0.001)PSR 121.5 0.0062415 8359200 3752.7 3399.2 2719.7 2733.4 2283.8 2569.1 3178.2 2278.4 1052.19 2808.2 TRUE FALSE 3433.513159 3177.911462 2535.094342 2943.926942 2192.83141 2714.560222 2966.188077 2258.480189 1161.568916 3156.101017 1.087897105 1.006910566 0.803236122 0.932773357 0.694791262 0.860099283 0.939826723 0.715591857 0.368039207 1 11.62392767 -3.138026175 0.429139271 0.739898538 2.486755083 0.289343628 0.167446538 26.3279257 1.232957103 0.115451833 31.64824885 0.000727736 3.138026175 1.746856545 AS(ph)PTSDIESVER ddPTM_A459_MK2206_30min_R2 2 ASPTSDIESVER 12 0 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 AS(0.904)PT(0.074)S(0.022)DIESVER;AS(0.968)PT(0.027)S(0.004)DIESVER 119.21 0.0043318 17685800 16555.8 9398.3 15995.5 13552.5 13853.8 9553.7 16425.6 9700.9 13152.7 15979.6 TRUE FALSE 17823.32478 8931.594088 16528.78199 12445.2174 13309.8302 9917.272748 14268.89899 10968.84094 14296.69807 15458.18696 1.153002278 0.577790533 1.069257477 0.805089072 0.861021427 0.641554716 0.923064201 0.709581335 0.924862541 1 13.9160835 -4.724658061 24.59405784 0.829569778 1.153005808 0.293398394 0.148002293 6754.417874 4516034.969 0.033761313 8.748217176 1.89E-05 4.724658061 0.32343603 AS(ph)PTSTEEEQVMLR ddPTM_A459_MK2206_30min_R1 1 ASPTSTEEEQVMLR 14 0 Q96PE3-3;Q96PE3;Q96PE3-2;Q96PE3-4 Q96PE3-3 INPP4A "Type I inositol 3,4-bisphosphate 4-phosphatase" 1 AS(0.999)PT(0.001)STEEEQVMLR 158.89 0.00030234 5044000 648.27 508.08 616.75 626.31 772.21 634.53 611.95 602.51 381.34 395.18 TRUE FALSE 593.1312323 475.0038997 574.8867284 674.5485047 741.4512405 670.4565402 571.1279321 597.2423186 420.9816576 444.1378819 1.335466432 1.069496476 1.294387963 1.518781739 1.669416798 1.509568464 1.285924834 1.344722761 0.947862533 1 8.794863818 -8.225827724 4.703323378 0.969001922 1.38365063 0.525587279 0.153832286 0.171636611 9.250803268 0.138598194 0.045672564 5.95E-09 8.225827724 0.414648708 AS(ph)PTSTEEEQVMLR ddPTM_A459_MK2206_30min_R2 4 ASPTSTEEEQVMLR 14 0 Q96PE3-3;Q96PE3;Q96PE3-2;Q96PE3-4 Q96PE3-3 INPP4A "Type I inositol 3,4-bisphosphate 4-phosphatase" 1 AS(0.768)PT(0.167)S(0.05)T(0.015)EEEQVMLR;AS(0.681)PT(0.314)S(0.005)TEEEQVMLR;AS(0.535)PT(0.371)S(0.091)T(0.004)EEEQVMLR;AS(0.87)PT(0.1)S(0.024)T(0.006)EEEQVMLR 131.86 0.00085516 11478500 34348.8 38359.4 36841.9 43076.9 38933.5 37980 38871.1 25437.6 27481.6 33222.5 TRUE FALSE 36978.57054 36454.52798 38070.19056 39557.37947 37404.77516 39425.35551 33767.27788 28762.38166 29871.89989 32138.45255 1.150602086 1.134296305 1.184568252 1.230842693 1.163863603 1.226734718 1.050681511 0.894952289 0.929475364 1 14.97201285 -7.505745125 3.753665743 0.936150961 1.180332568 0.890592875 0.037943038 0.067769643 2.085691864 0.018686723 0.011111 3.12E-08 7.505745125 0.244181607 AS(ph)PVGDGNFR ddPTM_A459_MK2206_30min_R2 1 ASPVGDGNFR 10 0 Q86YS7-3;Q86YS7;Q86YS7-2;Q86YS7-4;Q86YS7-5;H0YFC4 Q86YS7-3 C2CD5 C2 domain-containing protein 5 1 AS(1)PVGDGNFR 92.112 0.027084 19125000 53602 57255 37609 53992 34278 33373 55152 46943 41372 56057 TRUE FALSE 57705.81033 54411.79996 38862.86529 49580.68089 32932.07349 34643.0329 47910.47615 53078.61128 44970.46178 54227.86468 1.064135766 1.003391896 0.716658595 0.914302659 0.607290619 0.638841915 0.883502908 0.978806958 0.829286973 1 15.72674674 -10.58441481 21.38770796 1 0.842689718 0.087186105 0.146019079 0 0 0.152114314 0.03689314 2.60E-11 10.58441481 -0.157310282 AS(ph)PVPAPSSGLHAAVR ddPTM_A459_MK2206_30min_R1 2 ASPVPAPSSGLHAAVR 16 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 AS(1)PVPAPSSGLHAAVR;AS(1)PVPAPSSGLHAAVR 157.37 7.68E-05 30162000 1390.19 602.87 1188.44 581.75 1780.74 2100.53 2012.69 1418.95 1011.97 1151.03 TRUE FALSE 1271.94704 563.6230534 1107.772004 626.5564858 1709.809355 2219.460193 1878.427122 1406.54427 1117.167903 1293.628286 0.983239972 0.435691658 0.856329454 0.484340434 1.321716117 1.715686196 1.452060953 1.087286267 0.863592668 1 10.33720741 -6.270921098 24.64649353 1.278803033 0.683630404 0.495486057 0.270243823 459.7255414 1194994.469 0.087537948 0.100590911 5.36E-07 6.270921098 -0.595172628 AS(ph)PVPAPSSGLHAAVR ddPTM_A459_MK2206_30min_R2 4 ASPVPAPSSGLHAAVR 16 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 AS(0.617)PVPAPS(0.192)S(0.192)GLHAAVR;AS(0.901)PVPAPS(0.05)S(0.05)GLHAAVR;AS(0.888)PVPAPS(0.056)S(0.056)GLHAAVR;AS(1)PVPAPSSGLHAAVR 141.82 0.00055322 37201400 7732.2 11636.3 6336.5 18344.7 11109.3 26647 21902 14255.1 15552.9 12552.1 TRUE FALSE 8324.183177 11058.45826 6547.755747 16845.87933 10673.09306 27661.07026 19026.24109 16118.29052 16905.66313 12142.526 0.685539662 0.910721398 0.539241649 1.387345543 0.878984575 2.278032614 1.566909643 1.32742483 1.392269049 1 13.56778096 -6.062264878 1.685993876 1.501359124 0.736474285 0.39390395 0.374417262 0.357377603 2.033484162 0.126397829 0.19981827 8.66E-07 6.062264878 -0.764884839 AS(ph)PVSFQELNR ddPTM_A459_MK2206_30min_R1 1 ASPVSFQELNR 11 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 AS(0.998)PVS(0.002)FQELNR 117.27 0.0056476 14033000 2460.1 2411.4 2294.6 2049 2317.2 1913.7 2245.2 2224.1 1883.4 1802.9 TRUE FALSE 2250.855577 2254.417422 2138.848945 2206.814335 2224.901017 2022.05204 2095.426805 2204.654928 2079.18617 2026.256863 1.110844147 1.112601992 1.055566539 1.089108876 1.098035031 0.997924832 1.034136808 1.088043164 1.026121716 1 10.98460136 -1.522878745 0.140115275 0.993097378 1.421090792 0.527435224 0.028926819 65.81907404 0.616487732 0.130751835 5.640343059 0.03 1.522878745 0.427993415 AS(ph)PVSFQELNR ddPTM_A459_MK2206_30min_R2 4 ASPVSFQELNR 11 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 AS(0.995)PVS(0.005)FQELNR;AS(0.998)PVS(0.002)FQELNR;AS(1)PVSFQELNR;AS(1)PVSFQELNR 155.39 0.00053357 36291600 20173.4 30822.3 25325.9 24841.1 25389.6 32697.8 29001.3 23981.4 22724.9 22869.5 TRUE FALSE 21717.89101 29291.7094 26170.25287 22811.50267 24392.67673 33942.13769 25193.39447 27115.85132 24701.47072 22123.27009 0.981676349 1.324022592 1.182928779 1.03110899 1.102580072 1.534227877 1.138773535 1.225671034 1.116537954 1 14.43327703 -8.568842693 3.406657167 1.00015784 1.19557617 0.136231679 0.147330161 0.518908689 16.57897986 0.141883354 0.037482146 2.70E-09 8.568842693 0.195418331 AS(ph)QEANLLTLAQK ddPTM_A459_MK2206_30min_R2 1 ASQEANLLTLAQK 13 0 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 AS(1)QEANLLTLAQK 151.11 0.00047443 2349300 8475.8 11469 10809 8278.2 9364.2 8698.6 11621 8468.7 12285 10066 TRUE FALSE 9124.713765 10899.46614 11169.36667 7601.844579 8996.514457 9029.631318 10095.14874 9575.588167 13353.52709 9737.547244 0.937064903 1.119323569 1.147041076 0.780673448 0.923899441 0.927300386 1.036723981 0.98336757 1.371344011 1 13.24934271 -8.198574603 21.75749479 1.185671789 0.98337086 0.284531169 0.129219603 63.37269419 21932.93616 0.087228296 0.03296924 6.33E-09 8.198574603 -0.202300928 AS(ph)SASVPAVGASAEGTR ddPTM_A459_MK2206_30min_R1 1 ASSASVPAVGASAEGTR 17 0 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 "Pantothenate kinase 2, mitochondrial" 1 AS(0.542)S(0.458)AS(0.001)VPAVGASAEGTR 73.983 0.023868 3528100 1325.5 1395.5 1585 1103.5 1305.7 1262.2 1452.4 1170.9 1644.7 2115.1 TRUE FALSE 1212.759265 1304.652696 1477.414616 1188.491761 1253.691204 1333.664673 1355.513046 1160.662945 1815.672451 2377.134556 0.510176953 0.548834181 0.621510723 0.499968232 0.527395978 0.561038781 0.570229835 0.488261357 0.763807184 1 11.21500785 -8.525728492 3.196389608 0.999020614 0.544313304 0.935614766 0.038256833 0.049758793 1.304784617 0.036915094 0.009802986 2.98E-09 8.525728492 -0.45470731 AS(ph)SASVPAVGASAEGTR ddPTM_A459_MK2206_30min_R2 2 ASSASVPAVGASAEGTR 17 0 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 "Pantothenate kinase 2, mitochondrial" 1 AS(0.934)S(0.065)ASVPAVGASAEGTR;AS(0.958)S(0.042)ASVPAVGASAEGTR 182.7 6.85E-08 33318000 108480 133875 128180 138913 140304 147035 150158 138701 139099 159709 TRUE FALSE 116785.3122 127226.9622 132453.4572 127563.3635 134794.96 152630.52 130442.0742 156829.6969 151197.5796 154497.7084 0.7559032 0.823487698 0.857316646 0.825665085 0.872472229 0.987914459 0.844297793 1.015094001 0.978639626 1 17.23722591 -6.050323253 0.339225306 1.014732143 0.710385031 0.721401032 0.045659775 1.560158079 0.271556049 0.050358348 0.182547529 8.91E-07 6.050323253 -0.304347112 AS(ph)SEDTLNKPGSTAASGVVR ddPTM_A459_MK2206_30min_R2 1 ASSEDTLNKPGSTAASGVVR 20 1 Q5M775;Q5M775-2;J3KRD8;J3KRB9;J3KTI9;J3QRQ9;J3QS22 Q5M775 SPECC1 Cytospin-B 1 AS(0.5)S(0.5)EDTLNKPGSTAASGVVR 129.06 0.0008698 35317000 49204 57039 41071 50058 42422 49073 56121 42913 41230 41637 TRUE FALSE 52971.09607 54206.5262 42440.28664 45968.10127 40756.29913 50940.5074 48752.24529 48521.87644 44816.11087 40278.3881 1.315124526 1.34579681 1.053673909 1.141259704 1.011865197 1.264710675 1.210382232 1.204662816 1.112658996 1 15.29771833 -5.248610618 24.74863787 1.136804329 1.330460706 0.491810358 0.08287801 599.3087736 1156151.962 0.02142541 0.055875213 5.64E-06 5.248610618 0.193656377 AS(ph)SHSSQTQGGGSVTK ddPTM_A459_MK2206_30min_R2 3 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.495)S(0.495)HS(0.007)S(0.003)QTQGGGSVTK;AS(0.39)S(0.39)HS(0.162)S(0.047)QT(0.011)QGGGSVTK;AS(0.44)S(0.44)HS(0.111)S(0.008)QTQGGGSVTK 114.75 0.0013591 533688700 321074.1 987127 562197 1654491 1638002 2484137 1746635 1313783 2239475 1112426 TRUE FALSE 345655.78 938107.7086 580940.3674 1519313.793 1573685.811 2578672.574 1517299.726 1485498.949 2434260.487 1076127.631 0.321203331 0.87174391 0.539843371 1.4118342 1.462359823 2.396251616 1.409962613 1.380411493 2.262055557 1 20.03741776 -5.886440035 2.419535636 1.694451601 0.582309533 0.572341571 0.41327319 0.203249342 2.416657722 0.122004818 0.203378842 1.30E-06 5.886440035 -1.112142068 AS(ph)SHSSQTQGGGSVTKK ddPTM_A459_MK2206_30min_R2 1 ASSHSSQTQGGGSVTKK 17 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.32)S(0.32)HS(0.267)S(0.067)QT(0.027)QGGGSVTKK 55.011 0.041116 3000400 1386.4 2915.8 615.71 3871.9 4355.7 3491 3658.2 3334.3 5496.7 2460 TRUE FALSE 1492.54385 2771.005612 636.2374641 3555.553384 4184.673332 3623.852451 3177.873946 3770.104458 5974.79303 2379.730401 0.627190311 1.164419974 0.267356951 1.49409924 1.758465299 1.522799578 1.335392423 1.584256963 2.510701644 1 11.21658243 -5.88269638 6.876284155 1.627940112 0.738452009 0.507199339 0.413270866 0.177791361 9.981103097 0.113737013 0.169925626 1.31E-06 5.88269638 -0.889488103 AS(ph)SKGGGGYTCQSGSGWDEFTK ddPTM_A459_MK2206_30min_R1 1 ASSKGGGGYTCQSGSGWDEFTK 22 1 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 AS(0.315)S(0.315)KGGGGY(0.072)T(0.295)CQS(0.003)GSGWDEFTK 58.08 0.010984 8957100 1702.7 1804.7 1649 1625.2 1607.4 1131.9 1479 1273.4 1194.7 661.41 TRUE FALSE 1557.876424 1687.213702 1537.070474 1750.373186 1543.373854 1195.9872 1380.338609 1262.266798 1318.89334 743.3504642 2.095749581 2.269741909 2.067760159 2.354707867 2.076239847 1.608914311 1.856914975 1.698077635 1.774255084 1 9.537898742 -9.265071581 0.193531248 0.48694658 2.452097551 0.830018085 0.153726486 3.34142999 0.28112681 1.807424236 0.65653433 5.43E-10 9.265071581 1.965150971 AS(ph)SLGEIDESSELR ddPTM_A459_MK2206_30min_R1 1 ASSLGEIDESSELR 14 0 Q16513-3;Q16513-2;Q16513;Q16513-4;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 AS(0.666)S(0.334)LGEIDESSELR 258.39 1.11E-35 81050000 3683.3 3248.8 2548.9 2541.9 2926.2 2733.5 2627.6 2706.7 2395.9 1971.7 TRUE FALSE 3370.015993 3037.30253 2375.88777 2737.677578 2809.643258 2888.268408 2452.317598 2683.035607 2644.962379 2215.969082 1.520786558 1.370643009 1.07216648 1.235431307 1.267907247 1.303388405 1.106656956 1.210773034 1.193591734 1 11.11372204 -5.020692711 4.174062725 1.189390211 1.50006995 0.614105878 0.08913245 0.127356413 5.177357486 0.022350026 0.082154061 9.53E-06 5.020692711 0.310679739 AS(ph)SLGEIDESSELR ddPTM_A459_MK2206_30min_R2 2 ASSLGEIDESSELR 14 0 Q16513-3;Q16513-2;Q16513;Q16513-4;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 AS(0.5)S(0.5)LGEIDESSELR;AS(0.5)S(0.5)LGEIDESSELR 323.24 1.16E-109 116970000 126509 142373 129711 155216 125191 133995 141507 103553 114725 127865 TRUE FALSE 136194.6263 135302.9638 134035.5 142534.3563 120275.3723 139094.2736 122926.9609 117087.7327 124703.5731 123692.7755 1.101071794 1.093863108 1.083616237 1.152325637 0.972371845 1.124514128 0.993808736 0.946601224 1.00817184 1 16.91640171 -7.133797711 1.107687284 0.977588111 1.096360072 0.474953637 0.049013114 0.425772534 1.044343845 0.030924077 0.019638806 7.35E-08 7.133797711 0.11877196 AS(ph)SLNENVDHSALLK ddPTM_A459_MK2206_30min_R2 1 ASSLNENVDHSALLK 15 0 Q96SB3 Q96SB3 PPP1R9B Neurabin-2 1 AS(0.557)S(0.443)LNENVDHSALLK 75.743 0.025201 17023000 43331 60618 60355 58936 53735 56562 67871 45570 62924 49960 TRUE FALSE 46648.45468 57607.79827 62367.20558 54120.74027 51625.0939 58714.50654 58959.45617 51526.15547 68397.01578 48329.80929 0.965210816 1.19197239 1.290450066 1.119821101 1.068183274 1.214871472 1.219939765 1.066136122 1.415213856 1 15.56062568 -6.815464364 24.99951967 1.189659966 1.139396052 0.040188505 0.128465042 401.1800396 185638.5492 0.044150059 0.038936727 1.53E-07 6.815464364 -0.050263914 AS(ph)SLPGSLQR ddPTM_A459_MK2206_30min_R1 2 ASSLPGSLQR 10 0 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 AS(0.604)S(0.392)LPGS(0.003)LQR;AS(0.646)S(0.353)LPGS(0.001)LQR 97.452 0.020615 17734200 8366.2 6905.5 6135.9 5266 6291.7 5819.9 5942.1 5023.5 4813.7 4759.2 TRUE FALSE 7654.610757 6455.950695 5719.412204 5671.588232 6041.088266 6149.417709 5545.713351 4979.580069 5314.101341 5348.805626 1.431087853 1.206989213 1.069287726 1.06034667 1.129427519 1.149680534 1.036813401 0.930970467 0.993511769 1 12.38500106 -1.522878745 0.641866509 1.028512246 34.47039875 0.812765266 0.058184486 100.5843691 0.669437905 0.028564721 4770.659262 0.03 1.522878745 33.44188651 AS(ph)SLPGSLQR ddPTM_A459_MK2206_30min_R2 1 ASSLPGSLQR 10 0 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 AS(0.548)S(0.452)LPGSLQR 93.442 0.025215 20437000 32547 35042 31446 29244 26809 31243 26123 25619 30434 20852 TRUE FALSE 35038.82334 33301.86524 32494.39395 26854.67165 25756.34396 32431.97426 22693.01872 28967.49126 33081.09431 20171.60095 1.737037305 1.650928219 1.610898115 1.331310872 1.276861664 1.607803681 1.124998396 1.436053159 1.639983579 1 14.30003797 -1.522878745 0.039270497 6.80E-14 3.784405207 0.445614552 0.176405644 811.8362661 2.438168665 65.17154108 206.6754409 0.03 1.522878745 3.784405207 AS(ph)SMPATLLHSR ddPTM_A459_MK2206_30min_R2 1 ASSMPATLLHSR 12 0 Q5T7N3 Q5T7N3 KANK4 KN motif and ankyrin repeat domain-containing protein 4 1 AS(0.5)S(0.5)MPATLLHSR 116.58 0.0032927 2082500 12199 22482 19464 18794 15523 17598 14405 13779 15026 12481 TRUE FALSE 13132.96482 21365.57657 20112.92005 17258.47008 14913.48902 18267.70422 12513.6062 15579.96261 16332.93432 12073.74599 1.087729097 1.769589702 1.665839256 1.429421332 1.235199832 1.51301048 1.03643113 1.290400065 1.352764447 1 13.55958573 -6.609875426 1.102754142 1.206614595 1.523993276 0.253636996 0.214003638 0.68195879 1.768224615 0.105947877 0.111356381 2.46E-07 6.609875426 0.317378681 AS(ph)SPAQCVTPVQTVV ddPTM_A459_MK2206_30min_R2 3 ASSPAQCVTPVQTVV 15 0 Q13614;Q13614-2 Q13614 MTMR2 Myotubularin-related protein 2 1 AS(0.566)S(0.433)PAQCVT(0.001)PVQTVV;AS(0.5)S(0.5)PAQCVTPVQTVV;AS(0.5)S(0.5)PAQCVTPVQTVV 131.86 0.00067403 18082500 57544 64046 59199 63082 73362 65281 63902 52023 56928 56881 TRUE FALSE 61949.61288 60865.56877 61172.66511 57927.99881 70481.43927 67765.3142 55511.59064 58822.58472 61879.49454 55024.97763 1.125845308 1.106144362 1.111725397 1.052758244 1.280899008 1.231537333 1.008843493 1.069016059 1.124571008 1 15.74779903 -8.414869636 0.767610843 1.010150848 1.13820268 0.209954029 0.075282157 1.151222657 1.536241018 0.078677034 0.030234672 3.85E-09 8.414869636 0.128051832 AS(ph)SPGYIDSPTYSR ddPTM_A459_MK2206_30min_R1 1 ASSPGYIDSPTYSR 14 0 A0A0C4DGA7;O94929-3;O94929-2;O94929 A0A0C4DGA7 ABLIM3 Actin-binding LIM protein 3 1 AS(0.832)S(0.168)PGYIDSPTYSR 177.21 7.01E-05 10772000 2988.8 2933.3 2598.8 2562 2833.1 2523.6 2722.7 2646.4 2567.6 2265.3 TRUE FALSE 2734.586865 2742.341637 2422.400697 2759.325684 2720.251628 2666.484051 2541.073651 2623.262804 2834.511208 2545.942466 1.074096097 1.07714203 0.951475035 1.083813056 1.068465476 1.047346547 0.998087618 1.030370026 1.113344565 1 11.3139841 AS(ph)SPGYIDSPTYSR ddPTM_A459_MK2206_30min_R2 2 ASSPGYIDSPTYSR 14 0 A0A0C4DGA7;O94929-3;O94929-2;O94929 A0A0C4DGA7 ABLIM3 Actin-binding LIM protein 3 1 AS(0.5)S(0.5)PGYIDSPTYSR;AS(0.5)S(0.5)PGYIDSPTYSR 159.58 0.0002972 37658000 104764 159561 134094 195704 168399 154659 166215 127255 135727 111750 TRUE FALSE 112784.8124 151637.4328 138564.627 179714.3572 161786.8091 160544.6566 144390.7708 143887.6654 147532.2891 108103.6067 1.043302956 1.40270466 1.281776171 1.662427025 1.4965903 1.485099911 1.335670246 1.331016327 1.3647305 1 16.72205513 -9.329060324 0.896310996 0.99614247 1.398172947 0.354502087 0.152692634 4.502825604 4.094247994 0.201233815 0.050549612 4.69E-10 9.329060324 0.402030478 AS(ph)SPIKQSHEPVPDTSVEK ddPTM_A459_MK2206_30min_R2 1 ASSPIKQSHEPVPDTSVEK 19 1 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 AS(0.536)S(0.463)PIKQSHEPVPDTSVEK 77.681 0.0043766 13312000 15959 31570 25381 28511 33162 22248 31307 19588 21675 25094 TRUE FALSE 17180.83331 30002.27971 26227.18987 26181.5601 31859.89325 23094.66323 27196.35329 22148.21886 23560.25232 24275.18484 0.707752935 1.235923842 1.080411542 1.078531854 1.312446989 0.951369202 1.12033558 0.912381059 0.970548833 1 14.56719466 -7.760086078 24.99994609 0.9560987 1.081499976 0.090011327 0.154715774 77.23459022 1426879.662 0.074327568 0.03988094 1.74E-08 7.760086078 0.125401276 AS(ph)SPNLHR ddPTM_A459_MK2206_30min_R2 2 ASSPNLHR 8 0 A0A087X030;P51956-2;P51956;A0A087WY58 A0A087X030 NEK3 Serine/threonine-protein kinase Nek3 1 AS(0.774)S(0.226)PNLHR;AS(0.972)S(0.028)PNLHR 115.23 0.0099439 10603600 87506 137701 117048 131939 137598 159911 133201 106971 145706 121969 TRUE FALSE 94205.52664 130862.9686 120950.3219 121159.1616 132195.2111 165996.5252 115711.5487 120952.477 158379.2445 117989.1615 0.798425257 1.109110082 1.025096885 1.026866876 1.12040131 1.406879437 0.980696423 1.02511515 1.342320282 1 16.84829481 -4.064086495 0.98051532 1.132301755 1.15E-30 0.305425886 0.14005653 9.100825151 2.54937817 0.045519219 15.26893596 8.63E-05 4.064086495 -1.132301755 AS(ph)SPPDRIDIFGR ddPTM_A459_MK2206_30min_R1 1 ASSPPDRIDIFGR 13 1 Q9NWB6-2;Q9NWB6 Q9NWB6-2 ARGLU1 Arginine and glutamate-rich protein 1 1 AS(0.5)S(0.5)PPDRIDIFGR 77.24 0.02393 200230000 3391.9 3443.4 3663.9 3511 4245.2 3271.5 2873.5 3224.4 2058.4 1506.3 TRUE FALSE 3103.401093 3219.234034 3415.204676 3781.417828 4076.104695 3456.729503 2681.814058 3196.209411 2272.378046 1692.911816 1.833173509 1.901595821 2.017355331 2.233676789 2.407747797 2.041883972 1.584142796 1.887995217 1.342289672 1 10.72529111 -8.28282431 0.923950206 1.002221297 2.070079591 0.754337776 0.196527359 0.287468923 0.519857305 0.204547034 0.073101785 5.21E-09 8.28282431 1.067858294 AS(ph)SPPPQPQPPPPPAR ddPTM_A459_MK2206_30min_R1 1 ASSPPPQPQPPPPPAR 16 0 Q9H7P9;Q9H7P9-3;H7BXC7 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 AS(0.5)S(0.5)PPPQPQPPPPPAR 163.62 3.06E-05 10556000 644.44 640.79 698.45 599.44 578.71 607.28 688.83 693.48 507.17 528.52 TRUE FALSE 589.6269939 599.0744545 651.04116 645.6089727 555.6587553 641.6636688 642.8794075 687.4169775 559.8921364 593.9970477 0.99264297 1.008547865 1.096034336 1.086889194 0.935457099 1.080247236 1.082293944 1.157273391 0.942584039 1 9.21431195 AS(ph)SPPPQPQPPPPPAR ddPTM_A459_MK2206_30min_R2 1 ASSPPPQPQPPPPPAR 16 0 Q9H7P9;Q9H7P9-3;H7BXC7 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 AS(0.619)S(0.381)PPPQPQPPPPPAR 178.67 4.27E-09 0 2983.9 4928.2 5536.5 5569 6425.3 4837.8 6651.3 5049.1 4877.5 4514.5 TRUE FALSE 3212.349678 4683.472754 5721.084147 5113.994886 6173.010437 5021.905869 5777.97632 5709.034706 5301.736133 4367.192235 0.735564066 1.072421937 1.31001427 1.171002926 1.413496385 1.149916376 1.323041444 1.307255188 1.213991931 1 12.09249032 -4.828835742 2.451064458 1.251015125 0.648507251 0.655453512 0.109915945 0.255084861 2.098952946 0.026371053 0.315599341 1.48E-05 4.828835742 -0.602507874 AS(ph)SPSEHGPR ddPTM_A459_MK2206_30min_R2 1 ASSPSEHGPR 10 0 C9J052;Q9NSU2-2;Q9NSU2;Q9NSU2-1 C9J052 TREX1 Three-prime repair exonuclease 1 1 AS(0.571)S(0.426)PS(0.003)EHGPR 110.66 0.0061667 1829800 4481 8979.5 5824.3 10607 9316 16971 6091.6 7447 15553 6694.1 TRUE FALSE 4824.068805 8533.591087 6018.479255 9740.37417 8950.207031 17616.8433 5291.765603 8420.348469 16905.77183 6475.672065 0.74495261 1.317792347 0.9293984 1.50414877 1.3821279 2.720465632 0.817176279 1.300304954 2.610659041 1 12.66081421 -5.933670363 2.320867292 1.665054059 1.020384243 0.184438669 0.597452251 0.531319074 5.797807566 0.182683563 0.296197655 1.17E-06 5.933670363 -0.644669816 AS(ph)SPSPLTIGTPESQRK ddPTM_A459_MK2206_30min_R2 1 ASSPSPLTIGTPESQRK 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 AS(0.473)S(0.362)PS(0.166)PLTIGTPESQRK 117.3 0.00081559 8867600 24922 39762 34272 47976 44359 43801 32811 32434 38059 37009 TRUE FALSE 26830.04748 37787.4769 35414.61137 44056.20733 42617.24277 45467.87775 28502.87629 36673.23516 41369.30303 35801.39936 0.749413374 1.055474858 0.989196289 1.230572216 1.190379246 1.270002809 0.796138609 1.024352003 1.155521956 1 15.12772836 -4.374308267 1.675708439 1.089512525 0.141798904 0.35705499 0.132577613 4.044047045 4.486647942 0.038356326 8.675870725 4.22E-05 4.374308267 -0.947713621 AS(ph)TPDWVSEGPQPGLR ddPTM_A459_MK2206_30min_R1 1 ASTPDWVSEGPQPGLR 16 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 AS(0.5)T(0.5)PDWVSEGPQPGLR 238.65 2.34E-21 226190000 6181.5 5827.4 6328.3 5635.9 6538.4 5902.1 7773.3 6963.1 7008.8 6653.3 TRUE FALSE 5655.730965 5448.035201 5898.752628 6069.977995 6277.961683 6236.271802 7254.75734 6902.222351 7737.389841 7477.561034 0.756360388 0.728584518 0.788860512 0.811759071 0.839573446 0.833998114 0.970203694 0.923057976 1.034747802 1 12.86835207 -7.026411297 0.609211338 1.019587022 0.74186485 0.908869214 0.030486927 0.214096869 0.167464505 0.025205727 0.022166596 9.41E-08 7.026411297 -0.277722172 AS(ph)TPDWVSEGPQPGLR ddPTM_A459_MK2206_30min_R2 1 ASTPDWVSEGPQPGLR 16 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 AS(0.5)T(0.5)PDWVSEGPQPGLR 214.58 1.13E-08 21280000 20746 25942 27960 28836 22812 28660 30317 21439 23990 32833 TRUE FALSE 22334.32971 24653.758 28892.17245 26480.00656 21916.28626 29750.67638 26336.34148 24241.15091 26076.60684 31761.6619 0.703185173 0.77621121 0.909655563 0.83370973 0.690023284 0.936685129 0.829186507 0.763220482 0.821008892 1 14.95499878 -11.38006324 1.861742923 1.103174354 0.809627816 0.373449961 0.074931097 586762.234 241973.0814 267783.1856 0.020228592 4.17E-12 11.38006324 -0.293546538 AS(ph)TPQPAPAGVPALASQHPPEEEVHYHLPVAR ddPTM_A459_MK2206_30min_R2 3 ASTPQPAPAGVPALASQHPPEEEVHYHLPVAR 32 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 AS(0.5)T(0.5)PQPAPAGVPALASQHPPEEEVHYHLPVAR;AS(0.5)T(0.5)PQPAPAGVPALASQHPPEEEVHYHLPVAR;AS(0.5)T(0.5)PQPAPAGVPALASQHPPEEEVHYHLPVAR 73.509 1.45E-05 22907100 19295.1 41637.4 35724.7 52235 51774 57607 50055 35419.9 51488 42924.7 TRUE FALSE 20772.34769 39569.74726 36915.74367 47967.23341 49741.09262 59799.27475 43482.71837 40049.40254 55966.33317 41524.07055 0.500248348 0.952935171 0.889020348 1.155166937 1.197885755 1.440111096 1.047168974 0.964486429 1.347804597 1 15.34166026 -4.579073044 0.948160301 1.168899759 1.01E-15 0.622267356 0.15318028 1.93998344 1.072088821 0.052545913 2.553077713 2.64E-05 4.579073044 -1.168899759 AS(ph)TPVLK ddPTM_A459_MK2206_30min_R2 1 ASTPVLK 7 0 A0A669KBK8;Q04724;F6T2C8;A0A669KAE5 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 AS(0.5)T(0.5)PVLK 127.46 0.0053382 18059000 283820 331100 295700 312870 280690 254890 321760 250140 234510 293480 TRUE FALSE 305549.4774 314658.0555 305558.4904 287307.5202 269668.7002 264590.0176 279512.5255 282834.1569 254907.2559 283903.7716 1.076243108 1.108326436 1.076274854 1.011989092 0.94985952 0.931970773 0.984532625 0.996232474 0.897864986 1 18.11504249 -5.892869583 2.441526361 0.959952243 1.092622885 0.78321964 0.02989458 0.12446877 1.506236637 0.008973386 0.014854721 1.28E-06 5.892869583 0.132670642 AS(ph)TPYIEK ddPTM_A459_MK2206_30min_R2 1 ASTPYIEK 8 0 C9J618;C9J5A2;C9J347;C9J7P5;C9IZN7;Q969Z0-2;Q969Z0 C9J618 TBRG4 Protein TBRG4 1 AS(0.619)T(0.381)PYIEK 110.53 0.011984 9010200 108900 112820 118950 115220 99628 97613 112210 87212 110880 104460 TRUE FALSE 117237.4677 107217.5229 122915.7336 105806.1574 95716.10413 101327.7311 97476.69221 98610.90784 120524.142 101051.4788 1.160175677 1.061018841 1.216367491 1.047052044 0.94720142 1.002733779 0.964624105 0.975848241 1.192700428 1 16.62473091 -5.958053481 8.863368894 1.00848406 1.136827472 0.39269595 0.073079993 0.303950766 59.2601409 0.020299902 0.030097832 1.10E-06 5.958053481 0.128343412 AS(ph)VEHISR ddPTM_A459_MK2206_30min_R1 1 ASVEHISR 8 0 A0A590UKA5;A0A590UJ65;A6NGQ3;Q5VST9;Q5VST9-2;Q5VST9-6 A0A590UKA5 OBSCN Obscurin 1 AS(1)VEHISR 88.643 0.030782 5298300 4810.2 3883.7 3681.8 3362.4 4190.6 3798.6 4112.9 3999.1 1882.4 2732.8 TRUE FALSE 4401.067231 3630.870424 3431.889674 3621.372631 4023.679528 4013.673449 3838.535945 3964.13629 2078.082216 3071.359896 1.43293765 1.182170292 1.117384413 1.179077918 1.310064488 1.306806622 1.249783834 1.290677884 0.676600036 1 11.58466186 -8.250780058 24.94571089 0.838300017 1.251733241 0.699524075 0.110114645 323.6044701 757327.0841 0.074728548 0.02760435 5.61E-09 8.250780058 0.413433224 AS(ph)VSGPNS(ph)PSETRR ddPTM_A459_MK2206_30min_R1 1 ASVSGPNSPSETRR 14 1 C9J453;A0A087X255;O15344-2;O15344;A0A087X0X0 C9J453 MID1 E3 ubiquitin-protein ligase Midline-1 2 AS(0.796)VS(0.205)GPNS(0.469)PS(0.415)ET(0.115)RR 99.238 0.033056 6712500 1976.3 2139.1 2315.4 2246.6 2596.3 2097.5 2075.7 1928.9 1552.1 1354.1 TRUE FALSE 1808.205307 1999.844201 2158.237099 2419.633521 2492.883873 2216.258637 1937.23384 1912.035831 1713.446349 1521.856131 1.188157849 1.314082298 1.418161057 1.589922643 1.638054887 1.456286565 1.272941509 1.25638409 1.125892464 1 10.57161626 -8.020949802 1.216272745 1.022895264 1.438832608 0.578490992 0.124142712 0.374138233 1.006034647 0.129162905 0.044463253 9.53E-09 8.020949802 0.415937344 AS(ph)VSPMDEPVPDSESPIEK ddPTM_A459_MK2206_30min_R1 1 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AS(0.591)VS(0.409)PMDEPVPDSESPIEK 119.83 0.00082463 17191000 3440.4 3512.5 3431.6 3059.7 3477.8 2929.6 3388.8 3101.6 3135.4 2790.9 TRUE FALSE 3147.775914 3283.835612 3198.672553 3295.358624 3339.271862 3095.47142 3162.739335 3074.483038 3461.33605 3136.657762 1.003544585 1.046921871 1.019770978 1.05059553 1.064595539 0.986869354 1.008315084 0.980178034 1.103510906 1 11.61501241 -6.761401497 25 1.014069583 1.037420768 0.081767457 0.035469331 2.690474675 1773273.739 0.011812401 0.011096043 1.73E-07 6.761401497 0.023351185 AS(ph)VSPMDEPVPDSESPIEK ddPTM_A459_MK2206_30min_R2 4 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AS(0.563)VS(0.437)PMDEPVPDSESPIEK;AS(0.55)VS(0.45)PMDEPVPDSESPIEK;AS(0.61)VS(0.39)PMDEPVPDSESPIEK;AS(0.549)VS(0.451)PMDEPVPDSESPIEK 218.66 3.80E-19 24921400 205609 226011 217007 235478 241323 199878 251574 195640 207963 233971 TRUE FALSE 221350.5831 214787.6224 224241.9051 216238.6941 231847.4465 207484.4974 218542.0316 221210.8197 226051.2458 226336.5454 0.977971024 0.948974555 0.990745461 0.955385679 1.02434826 0.916707892 0.965562283 0.977353522 0.998739489 1 17.78811002 -8.167999602 3.057418698 1.000264187 0.968408303 0.175282519 0.026370214 0.458502221 7.713172486 0.021522418 0.006733249 6.79E-09 8.167999602 -0.031855884 AS(ph)WESLDEEWR ddPTM_A459_MK2206_30min_R1 2 ASWESLDEEWR 11 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 AS(0.995)WES(0.005)LDEEWR;AS(0.999)WES(0.001)LDEEWR 107.34 0.0092906 0 610.92 698.99 935.3 837.39 1116.36 671.85 906.01 852.28 828.1 675.76 TRUE FALSE 558.9580459 653.485624 871.8144419 901.8859229 1071.893017 709.8895664 845.571726 844.8286058 914.1839584 759.4782505 0.73597637 0.860440208 1.147912322 1.187507242 1.411354461 0.934706907 1.113358711 1.11238025 1.203699984 1 9.56886484 -5.149830164 3.076742565 1.147502688 0.7527319 0.568949719 0.120460891 0.187312711 3.281282399 0.032284461 0.113900718 7.08E-06 5.149830164 -0.394770788 AS(ph)WESLDEEWR ddPTM_A459_MK2206_30min_R2 2 ASWESLDEEWR 11 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 AS(0.999)WES(0.001)LDEEWR;AS(0.998)WES(0.002)LDEEWR 114.24 0.0056437 0 2536.1 6633.6 3806.03 4714.1 6460.3 8395.5 5522.2 4894.1 5638.8 4687.1 TRUE FALSE 2730.265766 6304.18507 3932.921141 4328.94295 6206.636162 8714.996636 4797.128507 5533.775674 6129.252631 4534.160311 0.602154661 1.390375425 0.867397902 0.954739721 1.368861208 1.922075101 1.05799711 1.220463172 1.351794425 1 12.14661968 -6.261749993 24.99534099 1.348205431 0.978698305 0.264666773 0.295935278 39.56834563 3184107.783 0.089503515 0.107963765 5.47E-07 6.261749993 -0.369507126 ASAAFSS(ph)VGSVITK ddPTM_A459_MK2206_30min_R1 1 ASAAFSSVGSVITK 14 0 H0YC42;P55327-2;P55327;P55327-3;P55327-4;P55327-7;P55327-5;P55327-6 H0YC42 TPD52 Tumor protein D52 1 ASAAFS(0.054)S(0.9)VGS(0.046)VITK 167.61 9.73E-07 0 1827.1 1630.3 1609.7 1566.9 1653.6 1634.2 1785.6 1406 1590.2 1438.5 TRUE FALSE 1671.695551 1524.167174 1500.438049 1687.582909 1587.73361 1726.726992 1666.485882 1393.70749 1755.506981 1616.71224 1.034009336 0.942757243 0.928079847 1.043836292 0.98207558 1.068048444 1.030786952 0.862062806 1.085849997 1 10.6588472 -5.76188023 24.99994961 1.006706413 0.965729659 0.082416627 0.063376526 32.16547699 1824239.993 0.017414186 0.027752638 1.73E-06 5.76188023 -0.040976753 ASAAFSS(ph)VGSVITK ddPTM_A459_MK2206_30min_R2 1 ASAAFSSVGSVITK 14 0 H0YC42;P55327-2;P55327;P55327-3;P55327-4;P55327-7;P55327-5;P55327-6 H0YC42 TPD52 Tumor protein D52 1 ASAAFS(0.077)S(0.916)VGS(0.007)VITK 160.78 0.00028813 3382000 26010 34407 23557 22582 24647 27157 34280 21355 21957 27269 TRUE FALSE 28001.3456 32698.39841 24342.37862 20736.97836 23679.23494 28190.47866 29778.99482 24146.17182 23866.78017 26379.21476 1.061492764 1.239551621 0.922786324 0.786110525 0.897647453 1.06866254 1.128881018 0.915348392 0.904757036 1 14.687114 -5.272355976 24.59539199 0.952472486 1.150522195 0.389173307 0.098969578 562.9684718 1268385.31 0.028533191 0.060366398 5.34E-06 5.272355976 0.198049709 ASAGPAPGPVVTAEGLHPSLPS(ph)PTGNSTPLGSSK ddPTM_A459_MK2206_30min_R1 1 ASAGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSK 34 0 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 ASAGPAPGPVVTAEGLHPS(0.067)LPS(0.91)PT(0.017)GNS(0.004)T(0.001)PLGSSK 136.8 7.91E-26 9800100 1655.3 1097.4 1212.6 1143.5 2212.1 1938.6 1924 1228.7 944.24 965.82 TRUE FALSE 1514.508043 1025.959061 1130.29209 1231.572568 2123.987373 2048.361857 1795.653471 1217.957605 1042.397127 1085.473073 1.395251601 0.945172281 1.041289847 1.134595227 1.956738887 1.887068327 1.65425888 1.122052343 0.96031597 1 10.08410822 -4.474935705 17.42418091 1.33061533 1.837459298 0 0.369735295 74218315.11 672652856.1 0.103327576 1284003434 3.35E-05 4.474935705 0.506843968 ASAGPAPGPVVTAEGLHPSLPS(ph)PTGNSTPLGSSK ddPTM_A459_MK2206_30min_R2 1 ASAGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSK 34 0 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 ASAGPAPGPVVTAEGLHPS(0.09)LPS(0.868)PT(0.024)GNS(0.008)T(0.008)PLGSSK 96.022 3.70E-11 9288200 11118 33493 24841 42604 50853 48801 44822 28019 40734 27334 TRUE FALSE 11969.20263 31829.78632 25669.18654 39123.11692 48856.2557 50658.15625 38936.81756 31681.1795 44276.96969 26442.09382 0.452657142 1.203754383 0.970769816 1.479577116 1.847669706 1.915814859 1.472531556 1.198134298 1.674488034 1 14.6905488 -4.773899852 0.985425903 1.538006885 1.86E-15 0.520013079 0.294978755 1.656415772 1.265283673 0.102227064 2.73492576 1.68E-05 4.773899852 -1.538006885 ASAGRLT(ph)PESQSK ddPTM_A459_MK2206_30min_R1 1 ASAGRLTPESQSK 13 1 J3KQV8;O43426;A0A0D9SGJ6;C9JFZ1;O43426-2;J3KPK1;O43426-4;H7BZ56;H7BZC2 J3KQV8 SYNJ1 Synaptojanin-1 1 ASAGRLT(0.993)PES(0.006)QSK 115.12 0.042145 4494800 1957.6 1615.2 1975.6 1779.6 2442.1 2073.8 2360.4 1960.2 1527.5 1152 TRUE FALSE 1791.09584 1510.050186 1841.501776 1916.6651 2344.825986 2191.216764 2202.942023 1943.062178 1686.289091 1294.718457 1.38338635 1.166315486 1.422318317 1.480372115 1.811070177 1.692427224 1.701483447 1.500760391 1.302436898 1 10.3384227 -8.55471455 2.445197165 1.002173793 1.525199905 0.464194651 0.174096918 0.319507037 4.561742937 0.194216618 0.052814143 2.79E-09 8.55471455 0.523026112 ASALGS(ph)DGVR ddPTM_A459_MK2206_30min_R2 2 ASALGSDGVR 10 0 O00159-3 O00159-3 MYO1C Unconventional myosin-Ic 1 ASALGS(1)DGVR;AS(0.002)ALGS(0.998)DGVR 89.356 0.030957 8499000 43668 65000 51448 50964 45516 52331 49076 36513 48245 42678 TRUE FALSE 47011.25565 61772.19452 53163.25064 46800.07817 43728.81314 54322.49288 42632.26225 41285.37447 52441.26289 41285.42036 1.13868904 1.496222976 1.28770036 1.133573978 1.059182946 1.315779091 1.0326227 0.999998889 1.270212643 1 15.33334477 -5.723995342 4.219831407 1.117264516 1.332982212 0.317472701 0.128708556 0.226731029 8.730987452 0.034800005 0.060091964 1.89E-06 5.723995342 0.215717696 ASALLFS(ph)SDEEDQWNIPASQTHLASDSR ddPTM_A459_MK2206_30min_R2 1 ASALLFSSDEEDQWNIPASQTHLASDSR 28 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;Q9Y4E1-5;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2;A0A087WYF6 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 AS(0.006)ALLFS(0.497)S(0.497)DEEDQWNIPASQTHLASDSR 46.57 0.030127 2675600 6713.9 9310.1 9157.5 8915.6 9568.6 7795 9783.2 7515.7 6329.1 7542.8 TRUE FALSE 7227.921346 8847.773972 9462.806479 8187.16696 9192.888686 8091.644187 8498.654088 8498.027795 6879.593678 7296.679054 0.990576849 1.212575462 1.296864835 1.122040164 1.259872967 1.108948897 1.164729054 1.164643221 0.942839013 1 12.83302428 -8.254993693 23.75373157 0.97141949 1.170859537 0.475079277 0.081221283 191.605741 706121.1259 0.056860215 0.020259047 5.56E-09 8.254993693 0.199440047 ASALLFSS(ph)DEEDQWNIPASQTHLASDSR ddPTM_A459_MK2206_30min_R1 2 ASALLFSSDEEDQWNIPASQTHLASDSR 28 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;Q9Y4E1-5;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2;A0A087WYF6 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 ASALLFS(0.135)S(0.865)DEEDQWNIPASQTHLASDSR;AS(0.001)ALLFS(0.233)S(0.766)DEEDQWNIPASQTHLASDSR 188.93 1.16E-32 16408300 3204.6 2257.42 2532.2 2053.77 4735 3630.4 3714.6 3239.9 2450.3 1883.36 TRUE FALSE 2932.031942 2110.461548 2360.321319 2211.951721 4546.394923 3835.950111 3466.805812 3211.573896 2705.017453 2116.684855 1.385200038 0.99705988 1.115102852 1.045007581 2.147884656 1.812244322 1.637846939 1.517265968 1.27795002 1 11.04759077 -6.196051347 24.99999789 1.607350921 1.124233263 0.321930383 0.301864405 218.8753932 83682.7821 0.08944033 0.115466958 6.37E-07 6.196051347 -0.483117658 ASAPS(ph)PEDSVFADTGK ddPTM_A459_MK2206_30min_R1 2 ASAPSPEDSVFADTGK 16 0 J3KQ40;O95759-2;O95759 J3KQ40 TBC1D8 TBC1 domain family member 8 1 ASAPS(0.995)PEDS(0.004)VFADTGK;ASAPS(0.973)PEDS(0.027)VFADTGK 239.19 2.18E-21 14105900 5393.4 5942.7 5656.3 4781.6 5307.2 4496.4 5433.3 5201.6 4728.5 4779 TRUE FALSE 4934.663008 5555.82915 5272.366115 5149.879661 5095.802986 4750.982282 5070.854471 5156.12296 5220.044496 5371.0586 0.918750544 1.034401142 0.981625134 0.958820233 0.948752074 0.884552308 0.944107084 0.95998263 0.971883736 1 12.39099075 -1.607154378 18.8983448 0.958913093 0.004824653 0 0.039416782 0 0 0.009403631 0 0.024708457 1.607154378 -0.954088441 ASAPS(ph)PEDSVFADTGK ddPTM_A459_MK2206_30min_R2 3 ASAPSPEDSVFADTGK 16 0 J3KQ40;O95759-2;O95759 J3KQ40 TBC1D8 TBC1 domain family member 8 1 AS(0.052)APS(0.904)PEDS(0.044)VFADTGK;AS(0.01)APS(0.932)PEDS(0.058)VFADTGK;ASAPS(0.997)PEDS(0.003)VFADTGK 166.9 1.56E-05 7619700 37369.7 45407.6 40248.9 44504.1 40824 36850.4 47282 36492.3 35073.9 36813.6 TRUE FALSE 40230.75296 43152.72461 41590.77824 40867.97267 39221.04464 38252.76779 41073.8166 41261.96891 38124.56442 35612.37525 1.12968463 1.211733964 1.167874312 1.14757784 1.101331893 1.074142557 1.153357964 1.158641304 1.07054259 1 15.12009104 -14.52287874 0.108577145 0.550458955 1.218744411 0.612971262 0.035976714 123.4850083 0.89110429 12.29848404 0.506242132 3.00E-15 14.52287874 0.668285456 ASAPS(ph)PNAQVACDHCLK ddPTM_A459_MK2206_30min_R1 2 ASAPSPNAQVACDHCLK 17 0 A0A3B3IUA7;Q14258 A0A3B3IUA7 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 1 ASAPS(1)PNAQVACDHCLK;AS(0.006)APS(0.994)PNAQVACDHCLK 193.42 8.62E-08 47019000 9671.5 9701.3 10281.7 8181.9 8853.2 8054.8 10853.6 10711.8 8756.7 10420 TRUE FALSE 8848.888138 9069.743607 9583.80685 8812.071356 8500.558297 8510.855815 10129.57615 10618.14786 9666.990301 11710.90827 0.755610747 0.7744697 0.818365803 0.752466944 0.725866697 0.726746006 0.864969302 0.906688672 0.825468877 1 13.51556535 -8.272961528 0.660156953 0.989763102 0.759704422 0.709233083 0.045135455 0.40916355 0.410386488 0.04758502 0.020823067 5.33E-09 8.272961528 -0.230058681 ASAPS(ph)PNAQVACDHCLK ddPTM_A459_MK2206_30min_R2 5 ASAPSPNAQVACDHCLK 17 0 A0A3B3IUA7;Q14258 A0A3B3IUA7 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 1 AS(0.024)APS(0.976)PNAQVACDHCLK;AS(0.002)APS(0.998)PNAQVACDHCLK;AS(0.003)APS(0.997)PNAQVACDHCLK;AS(0.014)APS(0.986)PNAQVACDHCLK;AS(0.053)APS(0.947)PNAQVACDHCLK 173.78 2.30E-07 590310600 667911 668065 719965 716325 707288 663203 755027 582915 626237 743769 TRUE FALSE 719046.7797 634889.8636 743968.2738 657798.9561 679516.3193 688441.6549 655891.0479 659103.9919 680705.9623 719499.8784 0.999370259 0.882404407 1.034007504 0.914244708 0.944428678 0.956833594 0.911592993 0.916058517 0.946082109 1 19.45663492 ASAS(ph)PDRIPSLPQETVDQEPK ddPTM_A459_MK2206_30min_R1 3 ASASPDRIPSLPQETVDQEPK 21 1 A0A494C1R1;A0A2R8Y5U1;Q76L82;Q8IXJ9 A0A494C1R1 ASXH1;ASXL1 Putative Polycomb group protein ASXL1 1 AS(0.224)AS(0.63)PDRIPSLPQET(0.146)VDQEPK;AS(0.214)AS(0.694)PDRIPSLPQET(0.091)VDQEPK;AS(0.083)AS(0.917)PDRIPSLPQETVDQEPK 92.716 0.00031303 22892500 5212.6 5999.1 6363.3 5094 5624.6 4623.9 5667.1 5589 5749.5 4645.8 TRUE FALSE 4769.240998 5608.5575 5931.376925 5486.340763 5400.560272 4885.701222 5289.058099 5540.135962 6347.1811 5221.356778 0.913410288 1.074157109 1.13598384 1.050750025 1.03432125 0.935714878 1.012966232 1.06105294 1.215619114 1 12.35020903 -8.009769656 23.8145357 1.117985047 1.027744883 0.158934594 0.07723695 410.4287526 1000452.084 0.046482877 0.020225926 9.78E-09 8.009769656 -0.090240164 ASAS(ph)PDRIPSLPQETVDQEPK ddPTM_A459_MK2206_30min_R2 2 ASASPDRIPSLPQETVDQEPK 21 1 A0A494C1R1;A0A2R8Y5U1;Q76L82;Q8IXJ9 A0A494C1R1 ASXH1;ASXL1 Putative Polycomb group protein ASXL1 1 AS(0.277)AS(0.72)PDRIPS(0.003)LPQETVDQEPK;AS(0.236)AS(0.762)PDRIPS(0.001)LPQETVDQEPK 61.807 0.0091554 25958000 64933 59030 55990 60517 59003 40863 73813 52264 48794 59179 TRUE FALSE 69904.32041 56098.65604 57856.67866 55572.56752 56686.24575 42418.0701 64121.26443 59095.08425 53038.01392 57247.99408 1.221078948 0.979923523 1.010632418 0.970733882 0.990187458 0.74095295 1.120061331 1.032264714 0.926460652 1 15.80493752 -4.76073513 6.447819682 0.973877895 1.228329253 0.395616737 0.091428141 0.129797103 24.80680536 0.022797135 0.144946468 1.73E-05 4.76073513 0.254451358 ASAS(ph)PGENDSGTGGEEPQR ddPTM_A459_MK2206_30min_R1 2 ASASPGENDSGTGGEEPQR 19 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 AS(0.001)AS(0.999)PGENDSGTGGEEPQR;AS(0.137)AS(0.863)PGENDSGTGGEEPQR 280.64 1.17E-71 5577600 1842.56 1515.48 1449.44 1322.46 1724.45 1455.9 1763.8 1617.14 1340.84 1521.92 TRUE FALSE 1685.840596 1416.821977 1351.056051 1424.316098 1655.761505 1538.3318 1646.14012 1603.001515 1480.225116 1710.46694 0.985602561 0.828324678 0.789875571 0.832706009 0.968017251 0.899363656 0.962392246 0.937171879 0.865392415 1 10.7401745 -6.255519538 24.9439613 0.934797007 0.851980477 0.299689529 0.059023434 598.0094691 2519782.464 0.017667895 0.022215679 5.55E-07 6.255519538 -0.08281653 ASAS(ph)PGENDSGTGGEEPQR ddPTM_A459_MK2206_30min_R2 1 ASASPGENDSGTGGEEPQR 19 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 ASAS(1)PGENDSGTGGEEPQR 217.67 4.32E-19 4941900 21878 22065 22141 25808 25991 25340 23324 35141 33144 28646 TRUE FALSE 23552.9965 20969.28419 22879.16989 23699.40384 24970.46275 26304.33146 20261.53078 39734.04936 36026.80521 27711.28337 0.849942465 0.756705632 0.8256265 0.855225777 0.901093696 0.949228194 0.731165371 1.433858145 1.300077111 1 14.75818591 -7.757598355 24.99999994 1.27522575 0.842109313 0.715562733 0.116872722 45.4826633 296038.1937 0.055172511 0.030303727 1.75E-08 7.757598355 -0.433116437 ASAS(ph)PSTSSTSSRPK ddPTM_A459_MK2206_30min_R1 2 ASASPSTSSTSSRPK 15 1 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;F5H858 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 ASAS(0.998)PS(0.001)TSSTSSRPK;AS(0.003)AS(0.991)PS(0.005)T(0.001)SSTSSRPK 178.67 9.40E-05 15755500 4153.95 4306.37 4092.97 3228.15 4200.32 3562.67 4008.23 4050.63 2957.3 2903.42 TRUE FALSE 3800.634739 4026.02453 3815.1506 3476.782672 4033.01236 3764.385297 3740.84829 4015.215769 3264.721918 3263.117589 1.164725032 1.23379695 1.169173496 1.065478818 1.235938409 1.153616195 1.146403152 1.230484547 1.000491655 1 11.67203526 -8.273539191 24.67231697 1.000245764 1.173441893 0.673396184 0.048658932 413.5197813 843184.0794 0.045072246 0.012002254 5.33E-09 8.273539191 0.173196129 ASAS(ph)PSTSSTSSRPK ddPTM_A459_MK2206_30min_R2 2 ASASPSTSSTSSRPK 15 1 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;F5H858 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 AS(0.364)AS(0.621)PS(0.015)TSSTSSRPK;AS(0.24)AS(0.743)PS(0.015)T(0.001)S(0.001)STSSRPK 74.812 0.021923 20088400 25879.4 33808 32903 34743 31013 31418 30977.3 23846.2 29395 28748.5 TRUE FALSE 27860.74676 32129.14388 33999.9696 31904.38576 29795.27379 32613.63401 26909.9433 26962.98022 31951.72397 27810.4388 1.00180896 1.155290793 1.222561422 1.147209003 1.071370143 1.172711953 0.967620234 0.969527321 1.148911177 1 14.76333889 -7.258070911 24.85356309 1.018975292 1.132240373 0.337933436 0.073208338 316.128623 2332499.636 0.029125175 0.021619004 5.52E-08 7.258070911 0.11326508 ASASGSGAQVGGPISSGS(ph)SASSVTVTR ddPTM_A459_MK2206_30min_R1 1 ASASGSGAQVGGPISSGSSASSVTVTR 27 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 ASASGSGAQVGGPIS(0.007)S(0.03)GS(0.466)S(0.466)AS(0.02)S(0.008)VT(0.001)VT(0.001)R 106.57 1.37E-09 4281200 1371.7 1673.1 1597 1141.4 1431.6 1389.4 1566.9 1374.8 1403.2 1362.7 TRUE FALSE 1255.029712 1564.180886 1488.600089 1229.310826 1374.576341 1468.066627 1462.37496 1362.780269 1549.067661 1531.521564 0.81946591 1.021324755 0.97197462 0.802672881 0.897523334 0.958567389 0.954851041 0.889821143 1.011456644 1 10.58074996 -6.76658589 24.56589378 0.955547562 0.907492041 0.161038966 0.067366411 259.2315444 1237383.281 0.024030021 0.02183363 1.71E-07 6.76658589 -0.048055521 ASAVSELS(ph)PR ddPTM_A459_MK2206_30min_R1 7 ASAVSELSPR 10 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ASAVSELS(1)PR;ASAVS(0.025)ELS(0.975)PR;ASAVSELS(1)PR;ASAVS(0.005)ELS(0.995)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVS(0.001)ELS(0.999)PR 142.19 0.0012261 4482001000 28421.1 26470.1 26369 22298.7 31533.7 26577.2 29149 24136.5 20855.8 18803.3 TRUE FALSE 26003.7362 24746.89168 24579.14575 24016.14974 30277.64596 28081.9781 27204.5234 23925.47713 23023.83504 21132.79476 1.230492062 1.171018408 1.163080701 1.136439832 1.432732693 1.32883409 1.287313093 1.132149221 1.089483682 1 14.36719595 -8.145409395 2.021301971 1.022277332 1.248362521 0.489695133 0.085213912 0.322986203 2.348389149 0.086052997 0.026362924 7.15E-09 8.145409395 0.226085189 ASAVSELS(ph)PR ddPTM_A459_MK2206_30min_R2 5 ASAVSELSPR 10 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ASAVS(0.001)ELS(0.999)PR;ASAVS(0.004)ELS(0.996)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR 138.63 0.0016163 3789920000 285095 365987 317182 389000 385414 361675 361927 302262 315237 320386 TRUE FALSE 306922.0924 347812.6178 327756.6896 357217.4557 370280.7098 375438.7956 314405.5501 341768.6812 342655.7444 309931.8311 0.99028903 1.122222963 1.057512191 1.152567823 1.194716621 1.211359267 1.014434526 1.102722105 1.105584229 1 18.24159141 -10.80146838 5.230639976 0.999981616 1.10911064 0.179037463 0.067558431 1.50E-05 2.07E-06 0.067835243 0.016449692 1.58E-11 10.80146838 0.109129023 ASCLVQT(ph)PPGQYSGNSFK ddPTM_A459_MK2206_30min_R2 1 ASCLVQTPPGQYSGNSFK 18 0 O00311 O00311 CDC7 Cell division cycle 7-related protein kinase 1 ASCLVQT(0.999)PPGQYSGNSFK 143.67 0.00019304 0 11523 11955 9798.6 10815 17016 11949 15472 10213 9815.5 11535 TRUE FALSE 12405.20974 11361.33208 10125.28043 9931.379905 16347.86634 12403.72757 13440.50781 11547.87417 10669.23445 11158.61389 1.111716012 1.018166969 0.907395894 0.890019137 1.465044538 1.111583185 1.20449618 1.034884285 0.956143348 1 13.44587021 -4.452443491 15.2946431 1.07372038 1.565591286 0.005038546 0.160291596 2828877.852 13653297.14 0.042094822 44213056.84 3.53E-05 4.452443491 0.491870906 ASDPAS(ph)PHIGR ddPTM_A459_MK2206_30min_R1 1 ASDPASPHIGR 11 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 ASDPAS(1)PHIGR 95.631 0.013912 4669700 6134.1 4447.9 5094.1 3997.5 5658.5 4514.8 5975.1 4918.4 4095.9 4353.8 TRUE FALSE 5612.362584 4158.340902 4748.326685 4305.388143 5433.109963 4770.424074 5576.511981 4875.398947 4521.683462 4893.181614 1.146976145 0.849823536 0.970396576 0.879874994 1.110343002 0.974912532 1.1396495 0.996365827 0.924078405 1 12.25655711 -6.257380257 24.98612439 1.027348782 0.954388139 0.093148881 0.094050042 780.9522604 4807184.459 0.027218445 0.03386828 5.53E-07 6.257380257 -0.072960643 ASDPAS(ph)PHIGR ddPTM_A459_MK2206_30min_R2 2 ASDPASPHIGR 11 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 ASDPAS(1)PHIGR;ASDPAS(1)PHIGR 108.23 0.0066737 19742900 241480 270410 250500 299650 285470 335630 288930 232816 277490 266560 TRUE FALSE 259967.8945 256981.8326 258851.545 275167.6365 274261.0134 348402.6348 250993.1439 263245.8506 301625.5786 257862.169 1.008166089 0.996586019 1.00383684 1.067111308 1.063595387 1.351119616 0.973361641 1.020878136 1.169716286 1 17.97624061 -5.939612185 2.439973978 1.103041496 1.000983997 0.145502698 0.100862489 0.564822602 6.810758662 0.031662365 0.05058186 1.15E-06 5.939612185 -0.102057499 ASDPQS(ph)PPQVSR ddPTM_A459_MK2206_30min_R1 3 ASDPQSPPQVSR 12 0 Q7L7X3;Q7L7X3-3;Q7L7X3-2 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 ASDPQS(0.973)PPQVS(0.027)R;ASDPQS(0.999)PPQVSR;ASDPQS(1)PPQVSR 153 0.00048069 87602700 14395 14624.7 13677.8 11771.9 15255.9 14098.4 14902.3 14297.1 12505.5 11616.2 TRUE FALSE 13170.62966 13672.62937 12749.38904 12678.57378 14648.2252 14896.63922 13908.19476 14172.10196 13805.49148 13055.30255 1.008833737 1.047285524 0.976567873 0.97114362 1.122013461 1.141041287 1.065329179 1.08554374 1.057462393 1 13.67234827 -6.259199982 24.9999887 1.08530422 1.002524689 0.460453357 0.040751802 177.2850989 1979160.565 0.012466486 0.015363882 5.51E-07 6.259199982 -0.082779531 ASDPQS(ph)PPQVSR ddPTM_A459_MK2206_30min_R2 3 ASDPQSPPQVSR 12 0 Q7L7X3;Q7L7X3-3;Q7L7X3-2 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 ASDPQS(0.904)PPQVS(0.096)R;ASDPQS(1)PPQVSR;ASDPQS(1)PPQVSR 168.93 0.00036847 134856100 311021 462982 382158 445237 389303 451003 374712 333198 403463 356870 TRUE FALSE 334833.0069 439990.9871 394898.957 408859.7129 374017.0081 468166.2352 325511.8643 376748.1226 438555.4824 345225.3611 0.969896898 1.274503662 1.143887447 1.18432699 1.083399571 1.356117736 0.94289673 1.091310677 1.270345496 1 18.39717893 -10.903524 3.472769861 0.998956462 1.147838189 0.10930652 0.12521637 12497646.69 8035393.982 92413.12583 0.028740571 1.25E-11 10.903524 0.148881728 ASDSGPSSSSSSSSS(ph)PPR ddPTM_A459_MK2206_30min_R1 1 ASDSGPSSSSSSSSSPPR 18 0 Q16643-3 Q16643-3 DBN1 Drebrin 1 ASDSGPSSSSSSS(0.001)S(0.04)S(0.958)PPR 190.18 4.51E-15 0 373.4 328.65 436.18 234.41 427.21 369.41 379.91 398.34 471.45 517.42 TRUE FALSE 341.6403692 307.2548253 406.5733169 252.4642988 410.1933211 390.325675 354.5668971 394.8573554 520.4589146 581.5218959 0.587493561 0.528363295 0.699153926 0.434144098 0.705378979 0.671214064 0.60972235 0.679006858 0.894994528 1 9.183689704 -8.301994482 1.795906203 1.002836814 0.603257484 0.761920603 0.076628606 0.157282218 0.97222653 0.070771727 0.020790448 4.99E-09 8.301994482 -0.39957933 ASDSGPSSSSSSSSS(ph)PPR ddPTM_A459_MK2206_30min_R2 2 ASDSGPSSSSSSSSSPPR 18 0 Q16643-3 Q16643-3 DBN1 Drebrin 1 ASDSGPSSSSSS(0.001)S(0.01)S(0.251)S(0.738)PPR;ASDSGPSSSSSS(0.001)S(0.016)S(0.116)S(0.867)PPR 192.23 4.61E-21 0 11562.8 13455.1 14052.6 15250.2 11753.6 12306.6 15259.2 11577.5 11199.1 13872.8 TRUE FALSE 12448.05686 12786.9393 14521.10667 14004.20988 11292.09461 12774.93629 13255.64871 13090.719 12173.17747 13420.13167 0.927565926 0.952817723 1.082039061 1.043522539 0.841429494 0.951923319 0.987743566 0.975453842 0.907083311 1 13.71211121 ASDSS(ph)SPSCSSGPR ddPTM_A459_MK2206_30min_R1 1 ASDSSSPSCSSGPR 14 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 AS(0.017)DS(0.099)S(0.527)S(0.332)PS(0.002)CS(0.022)S(0.001)GPR 148.85 0.00045142 925450 405.5 432.76 524.34 317.59 532.48 343.8 514.33 315.76 406.86 271.89 TRUE FALSE 371.0100956 404.5872453 488.7492617 342.0508368 511.2701941 363.2656589 480.0199841 312.9993436 449.154553 305.5737859 1.214142419 1.324024717 1.599447611 1.119372317 1.673148083 1.188798502 1.57088077 1.024300376 1.469872658 1 8.255376975 -10.86654868 3.05257528 0.996543994 1.354468669 0.206029077 0.208343426 42279765.75 53873633.03 1330935.366 0.047741782 1.36E-11 10.86654868 0.357924675 ASDSS(ph)SPSCSSGPR ddPTM_A459_MK2206_30min_R2 1 ASDSSSPSCSSGPR 14 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 AS(0.066)DS(0.015)S(0.865)S(0.05)PSCS(0.004)SGPR 191.01 0.00010454 2381200 4870 6929.9 4041.1 5339.7 5115.2 6458.1 7034.5 4794.3 4487.7 6286.7 TRUE FALSE 5242.850944 6585.771243 4175.828257 4903.429429 4914.351546 6703.867521 6110.8617 5420.931471 4878.032034 6081.565494 0.862089038 1.08290723 0.686637061 0.806277501 0.80807344 1.10232596 1.004817215 0.891371058 0.802101373 1 12.57022703 ASDSSS(ph)PSCSSGPR ddPTM_A459_MK2206_30min_R1 3 ASDSSSPSCSSGPR 14 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 AS(0.003)DSS(0.046)S(0.946)PS(0.004)CSSGPR;ASDSS(0.025)S(0.97)PS(0.004)CS(0.002)SGPR;ASDSS(0.005)S(0.779)PS(0.141)CS(0.073)S(0.002)GPR 206.67 7.40E-06 47953450 7558.45 7407.91 7761.87 6745.5 8341.02 7040.17 8159.08 6931.3 5990.05 6907.66 TRUE FALSE 6915.564136 6925.653713 7235.01589 7265.039579 8008.779511 7438.778341 7614.80266 6870.700375 6612.737133 7763.433071 0.890786856 0.892086484 0.931935115 0.935802436 1.031602828 0.958181551 0.980855066 0.885008 0.851780014 1 12.92247905 -5.386792657 2.403047461 0.949125079 0.889223691 0.176409984 0.049225579 0.588669829 6.482097955 0.014908488 0.041604664 4.10E-06 5.386792657 -0.059901389 ASDSSS(ph)PSCSSGPR ddPTM_A459_MK2206_30min_R2 3 ASDSSSPSCSSGPR 14 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 ASDSS(0.054)S(0.911)PS(0.024)CS(0.011)S(0.001)GPR;ASDSS(0.079)S(0.894)PS(0.004)CS(0.022)S(0.001)GPR;AS(0.004)DSS(0.005)S(0.985)PS(0.005)CSSGPR 217.19 1.22E-08 107404200 54708.6 75033 52965.4 70597 56116.1 62331.3 62634 50466.2 55339.9 59525.7 TRUE FALSE 58897.13248 71306.97033 54731.24 64828.99927 53912.69995 64703.3613 54410.08056 57062.30562 60153.26447 57583.38128 1.022814763 1.238325516 0.950469368 1.125828283 0.936254502 1.123646439 0.944892074 0.990950937 1.044628904 1 15.81336489 -5.274693641 24.99009957 1.016842279 1.130570154 0.250410521 0.080193665 868.9920914 1638431.386 0.019282233 0.040533635 5.31E-06 5.274693641 0.113727875 ASDVHEVR ddPTM_A459_MK2206_30min_R2 4 ASDVHEVR 8 0 P14618;P14618-3;B4DNK4;H3BQ34;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;; 131.22 0.0050899 32037800 167029 124995 136345 141975 187668 163180 175784 473676 400444 179837 FALSE TRUE 179816.8687 118787.9301 140890.6742 130375.1883 180299.2114 169389.9292 152703.3496 535587.0796 435273.8953 173968.9334 1.033614825 0.682811165 0.809861114 0.749416495 1.036387404 0.973679185 0.877762177 3.078636335 2.502020831 1 17.40847017 -7.742173077 24.96653853 2.342746224 0.874720861 0.588207777 0.498777857 130.7794003 169472.9085 0.221299255 0.127518226 1.81E-08 7.742173077 -1.468025363 ASEAAS(ph)PLPDSPGDK ddPTM_A459_MK2206_30min_R1 2 ASEAASPLPDSPGDK 15 0 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 AS(0.001)EAAS(0.999)PLPDSPGDK;ASEAAS(1)PLPDSPGDK 185.74 2.16E-05 69555000 9703.1 10997.5 11904.8 8305.7 9488.9 7728.8 9918.4 8831.4 9462.1 10728.7 TRUE FALSE 8877.800392 10281.56075 11096.73534 8945.406453 9110.93702 8166.397977 9256.761633 8754.188001 10445.71916 12057.85235 0.736267134 0.852685905 0.920291194 0.741873942 0.755601972 0.677268036 0.767695719 0.726015525 0.866300138 1 13.55768535 -8.560427349 4.253342475 0.999863492 0.77544875 0.543079406 0.064990566 0.182396008 10.9492356 0.068627094 0.017938392 2.75E-09 8.560427349 -0.224414742 ASEAAS(ph)PLPDSPGDK ddPTM_A459_MK2206_30min_R2 4 ASEAASPLPDSPGDK 15 0 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 AS(0.041)EAAS(0.959)PLPDSPGDK;ASEAAS(1)PLPDSPGDK;ASEAAS(1)PLPDSPGDK;ASEAAS(1)PLPDSPGDK 240.5 4.04E-20 76831600 557799 529299 547174 446923 468214 375775 480753 350920 348479 529551 TRUE FALSE 600504.5203 503014.7813 565416.5081 410407.9613 449829.5658 390075.3809 417629.5536 396786.4489 378789.0735 512271.7942 1.172238111 0.981929489 1.103743197 0.801152759 0.878107229 0.761461758 0.815249948 0.774562358 0.739429884 1 18.96654993 -5.763460855 24.99974005 0.814136354 1.075566225 0.678537955 0.082241357 28.06969417 347147.4457 0.021550504 0.03384862 1.72E-06 5.763460855 0.261429871 ASEAAS(ph)PLPDSPGDKLVIVK ddPTM_A459_MK2206_30min_R2 1 ASEAASPLPDSPGDKLVIVK 20 1 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 AS(0.104)EAAS(0.895)PLPDS(0.001)PGDKLVIVK 67.097 0.0081936 7391300 19836 54446 38702 41091 60680 50493 44331 25718 48289 36262 TRUE FALSE 21354.65941 51742.29081 39992.30536 37733.73386 58297.39831 52414.5465 38510.28645 29079.4309 52489.08993 35078.77391 0.608762993 1.475031338 1.140071357 1.075685654 1.661899542 1.494195511 1.097823047 0.828975123 1.49632054 1 15.0983107 -3.728553012 14.98203169 1.205832691 1.170966731 0 0.31965779 0 0 0.07189328 0 0.00018683 3.728553012 -0.034865961 ASEAASQAS(ph)PSAVTSKPR ddPTM_A459_MK2206_30min_R1 2 ASEAASQASPSAVTSKPR 18 1 A0A286YF23;A0A0J9YY01;A0A2R8YFM0;Q96JP2 A0A286YF23 MYO15B Unconventional myosin-XVB 1 ASEAASQAS(0.951)PS(0.036)AVT(0.008)S(0.005)KPR;ASEAAS(0.032)QAS(0.954)PS(0.014)AVTSKPR 189.44 1.04E-09 10343100 3624.2 2824.1 3025.5 2766.8 2917.2 2436.17 3055.8 2645.9 2576.7 2432.3 TRUE FALSE 3315.942759 2640.250577 2820.13749 2979.899415 2801.001747 2574.10384 2851.953158 2622.767175 2844.557186 2733.631687 1.213017384 0.965839908 1.03164501 1.090088116 1.024644893 0.941642524 1.043283618 0.95944424 1.04057807 1 11.41660316 -4.75332796 24.99843864 1.011945234 1.213017753 0.666319437 0.042924159 185.7034744 572271.11 0.010805423 0.117520424 1.76E-05 4.75332796 0.201072519 ASEAASQAS(ph)PSAVTSKPR ddPTM_A459_MK2206_30min_R2 2 ASEAASQASPSAVTSKPR 18 1 A0A286YF23;A0A0J9YY01;A0A2R8YFM0;Q96JP2 A0A286YF23 MYO15B Unconventional myosin-XVB 1 ASEAAS(0.005)QAS(0.99)PS(0.005)AVTSKPR;ASEAASQAS(0.5)PS(0.5)AVTSKPR 155.54 1.42E-05 40957000 122238 105453 108032 125906 114205 115145 128761 91809 98404 113321 TRUE FALSE 131596.6353 100216.3574 111633.733 115619.077 109720.7379 119526.9237 111854.526 103808.7515 106963.002 109623.3451 1.20044353 0.914188099 1.018339049 1.054693934 1.000888431 1.090341876 1.020353155 0.946958437 0.975731967 1 16.74219554 -7.608493708 5.924044312 0.971826016 1.038879569 0.173608526 0.069185681 0.381384536 20.82158244 0.031767112 0.018068552 2.46E-08 7.608493708 0.067053553 ASEDS(ph)EEEPSGK ddPTM_A459_MK2206_30min_R2 2 ASEDSEEEPSGK 12 0 Q8IY33;Q8IY33-4;Q8IY33-2 Q8IY33 MICALL2 MICAL-like protein 2 1 AS(0.002)EDS(0.998)EEEPSGK;AS(0.001)EDS(0.999)EEEPSGK 161.25 0.0004804 5908100 37673 48842 44716 39298 44276 36849 49209 38025 40843 40596 TRUE FALSE 40557.27385 46416.5773 46206.80912 36087.22769 42537.50177 38251.31452 42747.79919 42994.99806 44395.45031 39271.35584 1.032744426 1.181944863 1.176603357 0.918919831 1.083168657 0.974025818 1.088523639 1.094818275 1.130479184 1 15.26118979 -5.692322073 25 1.046253623 1.135582353 0.244789054 0.071119873 72.4009051 26186.07539 0.019262873 0.033364268 2.03E-06 5.692322073 0.08932873 ASEDT(ph)TSGSPPKK ddPTM_A459_MK2206_30min_R2 1 ASEDTTSGSPPKK 13 1 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 AS(0.003)EDT(0.626)T(0.039)S(0.005)GS(0.327)PPKK 134.68 0.022476 0 11676 12175 15142 10544 11609 8312.9 15456 13393 11139 15281 TRUE FALSE 12569.92354 11570.4072 15646.82672 9682.521471 11153.17233 8629.253235 13426.60863 15143.51109 12107.85009 14782.38222 0.850331384 0.782716008 1.058478024 0.655004134 0.754490864 0.583752544 0.908284499 1.02442968 0.819072995 1 13.85159116 -10.95660661 7.043120493 1.000017896 0.825789299 0.121835553 0.139908207 4.11E-05 3.30E-06 0.141512297 0.034318251 1.11E-11 10.95660661 -0.174228597 ASEDTTS(ph)GSPPKK ddPTM_A459_MK2206_30min_R2 1 ASEDTTSGSPPKK 13 1 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 ASEDT(0.06)T(0.104)S(0.485)GS(0.351)PPKK 102.73 0.016275 134850000 23467 19973 25046 18162 20792 15762 25923 18314 19356 27995 TRUE FALSE 25263.65156 18981.16986 25881.02114 16678.1065 19975.60161 16361.83395 22519.27896 20707.70268 21039.54989 27081.52544 0.932874022 0.700889981 0.955670728 0.615848119 0.737609912 0.604169584 0.831536577 0.764643141 0.776896779 1 14.72502138 -9.406056924 1.206378999 1.000646743 0.761603775 0.281676523 0.110507702 10.92230243 13.62559841 0.122084858 0.031153421 3.93E-10 9.406056924 -0.239042968 ASEDTTSGS(ph)PPK ddPTM_A459_MK2206_30min_R1 4 ASEDTTSGSPPK 12 0 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 ASEDT(0.002)T(0.027)S(0.072)GS(0.898)PPK;ASEDT(0.001)T(0.001)S(0.026)GS(0.972)PPK;ASEDT(0.001)T(0.003)S(0.004)GS(0.993)PPK;ASEDT(0.001)T(0.003)S(0.001)GS(0.994)PPK 186.16 0.0001042 231778000 19056 24286.4 25700.6 20480.1 15609.1 12703.7 16680.9 17284 19166.4 20378.4 TRUE FALSE 17435.18713 22705.35095 23956.11488 22057.48085 14987.35649 13422.97252 15568.1476 17132.88781 21158.81587 22903.03004 0.761261156 0.991368867 1.045980153 0.96308134 0.65438313 0.586078457 0.679741832 0.748062059 0.923843519 1 14.48325086 -6.24844215 24.21208433 0.739510468 0.95160171 0.273836694 0.13532072 589.0851962 1097385.032 0.040800385 0.052304877 5.64E-07 6.24844215 0.212091242 ASEDTTSGS(ph)PPK ddPTM_A459_MK2206_30min_R2 3 ASEDTTSGSPPK 12 0 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 ASEDTTS(0.001)GS(0.999)PPK;ASEDTT(0.011)S(0.025)GS(0.963)PPK;ASEDT(0.007)T(0.223)S(0.156)GS(0.613)PPK 153.81 0.00045908 158362000 116864 103152 119640 92806 105115 74751 127149 96071 83879 124044 TRUE FALSE 125811.1977 98029.62168 123628.7379 85223.45293 100987.6569 77595.70169 110454.1836 108627.8096 91174.6438 119996.4544 1.048457626 0.816937651 1.030269923 0.710216425 0.841588674 0.646649954 0.920478727 0.905258493 0.759811148 1 16.87263225 -1.522878802 0.961360571 0.831955494 154.4932021 0.193504985 0.116872224 2057.87262 3.33523497 0.035628476 695737.4497 0.029999996 1.522878802 153.6612466 ASEDTTSGS(ph)PPKK ddPTM_A459_MK2206_30min_R1 5 ASEDTTSGSPPKK 13 1 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 ASEDT(0.058)T(0.001)S(0.052)GS(0.889)PPKK;AS(0.001)EDT(0.191)T(0.011)S(0.051)GS(0.746)PPKK;ASEDT(0.004)T(0.002)S(0.037)GS(0.956)PPKK;ASEDTTS(0.002)GS(0.997)PPKK;ASEDT(0.068)T(0.002)S(0.002)GS(0.928)PPKK 229.9 8.22E-13 1863521100 18624 21471.1 22713.5 19755.3 14624.5 12430.9 15774.5 17496.3 9914.06 16905.1 TRUE FALSE 17039.931 20073.32749 21171.7709 21276.85663 14041.9752 13134.72682 14722.21189 17343.33169 10944.66201 18999.43141 0.896865313 1.056522537 1.114337079 1.119868072 0.739073443 0.6913221 0.774876446 0.912834248 0.576052082 1 14.21366862 -6.265631364 24.94251553 0.773075379 1.052402763 0.526810964 0.122590698 260.0630949 1547386.275 0.036457955 0.042824714 5.42E-07 6.265631364 0.279327384 ASEDTTSGS(ph)PPKK ddPTM_A459_MK2206_30min_R2 3 ASEDTTSGSPPKK 13 1 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 AS(0.001)EDT(0.037)T(0.028)S(0.215)GS(0.719)PPKK;ASEDT(0.33)T(0.149)S(0.116)GS(0.405)PPKK;AS(0.002)EDT(0.096)T(0.076)S(0.348)GS(0.479)PPKK 144.12 0.0012322 109221200 45258.5 47351.8 46600.3 44907.2 41166.2 32268.7 49719 38204 33707.9 51741 TRUE FALSE 48723.52556 45000.37847 48153.93074 41238.13811 39549.80814 33496.70799 43190.83558 43197.39397 36639.75221 50052.69541 0.97344459 0.899060043 0.962064687 0.823894453 0.790163403 0.669228854 0.862907287 0.863038316 0.732023559 1 15.61116014 -5.814273724 5.923330565 0.807766098 0.940257613 0.30590899 0.08468552 0.216017868 16.27060202 0.023288221 0.03547808 1.53E-06 5.814273724 0.132491516 ASEENLLSSSSVPS(ph)ADRDSSPTTNSK ddPTM_A459_MK2206_30min_R2 1 ASEENLLSSSSVPSADRDSSPTTNSK 26 1 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 ASEENLLS(0.009)S(0.009)S(0.024)S(0.063)VPS(0.277)ADRDS(0.277)S(0.277)PT(0.029)T(0.029)NS(0.003)K 44.683 0.035573 98739000 8781.7 11255 8624.9 10087 9344.7 8168.5 11186 8157 9544.1 9388.4 TRUE FALSE 9454.033704 10696.09307 8912.449861 9262.859833 8977.780125 8479.357991 9717.264763 9223.147907 10374.22857 9082.057277 1.040957287 1.17771698 0.981325 1.019907665 0.988518334 0.933638462 1.069940925 1.015535096 1.142277377 1 13.14880342 -5.274255762 24.99435938 1.017177466 1.10933714 0.260040861 0.060972379 880.8486193 1717821.773 0.015786949 0.033171456 5.32E-06 5.274255762 0.092159674 ASEENLLSSSSVPSADRDS(ph)SPTTNSK ddPTM_A459_MK2206_30min_R1 2 ASEENLLSSSSVPSADRDSSPTTNSK 26 1 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 ASEENLLSSSSVPS(0.001)ADRDS(0.47)S(0.47)PT(0.054)T(0.005)NSK;ASEENLLSSSSVPS(0.002)ADRDS(0.487)S(0.487)PT(0.021)T(0.001)NSK 135.68 2.39E-09 147462000 5120.3 4899.2 4932.1 4316.4 5131.6 4303 4473.5 4838 4325.6 4007.1 TRUE FALSE 4684.791597 4580.26119 4597.322794 4648.849876 4927.197506 4546.632141 4175.080977 4795.701876 4775.261599 4503.5298 1.040248828 1.017038055 1.020826551 1.032268039 1.094074587 1.009570791 0.92706858 1.064876239 1.060337516 1 12.13684049 ASEENLLSSSSVPSADRDS(ph)SPTTNSK ddPTM_A459_MK2206_30min_R2 1 ASEENLLSSSSVPSADRDSSPTTNSK 26 1 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 ASEENLLSSSSVPS(0.001)ADRDS(0.431)S(0.431)PT(0.128)T(0.008)NS(0.001)K 110.89 1.05E-08 102380000 60728 62363 52179 64577 68014 54506 67567 64082 54340 61697 TRUE FALSE 65377.38237 59266.1441 53918.62182 59300.85253 65343.42862 56580.26402 58695.37174 72457.73743 59066.39498 59683.83194 1.095395189 0.993001658 0.903404156 0.993583197 1.094826295 0.947999855 0.983438392 1.214026229 0.989654871 1 15.86505254 ASEGLDACAS(ph)PTK ddPTM_A459_MK2206_30min_R1 3 ASEGLDACASPTK 13 0 Q92618 Q92618 ZNF516 Zinc finger protein 516 1 ASEGLDACAS(0.699)PT(0.3)K;ASEGLDACAS(0.574)PT(0.426)K;ASEGLDACAS(0.77)PT(0.23)K 144.88 0.00064602 25952300 12198.1 11745.5 12384.2 10285.6 10613.4 8478 10064 10537.5 10537.6 9421.7 TRUE FALSE 11160.58754 10980.86582 11543.59501 11077.79869 10190.6458 8958.017033 9392.648923 10445.37175 11633.02123 10588.93133 1.053986205 1.037013602 1.090156755 1.046167772 0.962386618 0.84597933 0.8870252 0.986442487 1.098602009 1 13.37026937 -6.252261541 4.727853748 0.952492875 1.058921317 0.327312038 0.064760016 0.232280549 14.79599206 0.02170558 0.026813134 5.59E-07 6.252261541 0.106428442 ASEGLDACAS(ph)PTK ddPTM_A459_MK2206_30min_R2 1 ASEGLDACASPTK 13 0 Q92618 Q92618 ZNF516 Zinc finger protein 516 1 ASEGLDACAS(0.738)PT(0.262)K 143.05 0.00074275 20983000 63130 67955 71347 72707 73273 57619 85013 59522 57473 69373 TRUE FALSE 67963.28134 64580.45352 73725.67337 66766.60552 70395.93385 59811.73142 73850.69098 67301.72977 62471.89765 67109.36469 1.012724255 0.962316568 1.098589947 0.994892528 1.048973331 0.891257602 1.10045284 1.002866442 0.930896872 1 16.03422648 ASEGLDACASPT(ph)K ddPTM_A459_MK2206_30min_R1 1 ASEGLDACASPTK 13 0 Q92618 Q92618 ZNF516 Zinc finger protein 516 1 ASEGLDACAS(0.254)PT(0.746)K 111.81 0.011986 6508100 4137.5 4489.7 4548.1 3899.9 3998.8 3465.1 3179.6 3879.3 3978.1 3555.8 TRUE FALSE 3785.583898 4197.419714 4239.387644 4200.270974 3839.519328 3661.290968 2967.494686 3845.383689 4391.637731 3996.319349 0.947267615 1.050321395 1.060823041 1.051034867 0.960763891 0.916165764 0.742556945 0.962231332 1.098920619 1 11.96445616 -6.424016547 4.091472057 0.929670967 1.030908345 0.157082784 0.088665808 0.395033894 11.62017572 0.030316076 0.034159019 3.77E-07 6.424016547 0.101237378 ASEGLDACASPT(ph)K ddPTM_A459_MK2206_30min_R2 3 ASEGLDACASPTK 13 0 Q92618 Q92618 ZNF516 Zinc finger protein 516 1 ASEGLDACAS(0.41)PT(0.59)K;ASEGLDACAS(0.223)PT(0.777)K;ASEGLDACAS(0.255)PT(0.745)K 154.72 0.00088201 35907400 108076 129289 128105 125842 135887 102790 139949 102286 100209 130841 TRUE FALSE 116350.3817 122868.6963 132375.9568 115560.3061 130551.3936 106701.7455 121573.5282 115655.1314 108924.9977 126571.6689 0.919245062 0.970744064 1.045857718 0.913002942 1.031442461 0.843014447 0.960511379 0.913752125 0.860579612 1 16.94959499 -6.753217712 24.99968603 0.912989759 0.976137846 0.218242261 0.057135289 273.2660194 830920.6436 0.018103966 0.017813312 1.77E-07 6.753217712 0.063148088 ASEIDQVVPAAQS(ph)SPINCEK ddPTM_A459_MK2206_30min_R1 1 ASEIDQVVPAAQSSPINCEK 20 0 O94782;C9JWX4;C9JC88 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 ASEIDQVVPAAQS(0.589)S(0.411)PINCEK 104.53 0.00034276 5983400 3034.8 3092.8 2767.5 2875 2721.8 2503 2740.8 2898.1 2378 2505.2 TRUE FALSE 2776.674324 2891.458158 2579.649811 3096.432998 2613.384942 2644.717697 2557.966233 2872.762217 2625.20161 2815.563089 0.986187926 1.026955556 0.916210978 1.099756212 0.928192642 0.939321057 0.908509649 1.020315342 0.932389553 1 11.45920776 ASEIDQVVPAAQS(ph)SPINCEKR ddPTM_A459_MK2206_30min_R1 1 ASEIDQVVPAAQSSPINCEKR 21 1 O94782;C9JWX4;C9JC88 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 ASEIDQVVPAAQS(0.5)S(0.5)PINCEKR 65.428 0.0051776 7983800 1674.8 1246.2 1765.8 1906.3 1844.9 1334.5 1530.8 1686.6 1189.5 872.94 TRUE FALSE 1532.349465 1165.072153 1645.942416 2053.123556 1771.413726 1410.058237 1428.683125 1671.854234 1313.152782 981.0863976 1.56189044 1.187532674 1.677673261 2.09270413 1.805563435 1.437241654 1.456225597 1.704084613 1.338468034 1 9.93823638 -8.546024884 3.27053543 1.000715725 1.613397118 0.417990137 0.228164112 0.255044277 7.341003052 0.242952023 0.064378491 2.84E-09 8.546024884 0.612681394 ASEIDQVVPAAQSS(ph)PINCEK ddPTM_A459_MK2206_30min_R1 1 ASEIDQVVPAAQSSPINCEK 20 0 O94782;C9JWX4;C9JC88 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 ASEIDQVVPAAQS(0.482)S(0.518)PINCEK 91.733 0.00099354 5012600 2240.7 2341.8 2179.8 2021.8 2283.1 1975 2288.7 2150.2 1985.9 2300.7 TRUE FALSE 2050.116699 2189.348394 2031.841249 2177.519386 2192.159292 2086.822793 2136.024999 2131.401028 2192.341412 2585.728085 0.79285858 0.846704805 0.785790765 0.842130075 0.847791887 0.807054232 0.826082607 0.824294341 0.847862319 1 11.33635485 -9.039436756 1.468211398 1.000036126 0.821945156 0.874000276 0.020210056 0.883590318 2.198869914 0.018506735 0.005362317 9.13E-10 9.039436756 -0.178090971 ASEIDQVVPAAQSS(ph)PINCEK ddPTM_A459_MK2206_30min_R2 1 ASEIDQVVPAAQSSPINCEK 20 0 O94782;C9JWX4;C9JC88 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 ASEIDQVVPAAQS(0.249)S(0.751)PINCEK 147.11 1.48E-05 3765000 50411 60450 49586 47600 56744 54148 60643 44678 47144 53944 TRUE FALSE 54270.50492 57448.1409 51239.17249 43710.92774 54515.94544 56208.64008 52680.50125 50517.568 51244.4999 52183.8117 1.039987367 1.100880504 0.98189785 0.837633862 1.044690751 1.077127911 1.009518077 0.96806972 0.981999939 1 15.67131471 -5.272541789 24.44003899 0.987137662 1.070433935 0.230156031 0.060580309 740.9383694 1631049.558 0.0171177 0.036214711 5.34E-06 5.272541789 0.083296273 ASEIDQVVPAAQSS(ph)PINCEKR ddPTM_A459_MK2206_30min_R1 1 ASEIDQVVPAAQSSPINCEKR 21 1 O94782;C9JWX4;C9JC88 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 ASEIDQVVPAAQS(0.347)S(0.653)PINCEKR 58.272 0.013062 7391000 1892.6 2052.2 2183.1 1846.5 2333 2015.5 1523.3 2018.4 1243.1 1193.5 TRUE FALSE 1731.624432 1918.601407 2034.917254 1988.71775 2240.07167 2129.615868 1421.683436 2000.753342 1372.324693 1341.35979 1.290947025 1.430340629 1.517055505 1.482613214 1.670000611 1.587654471 1.059882253 1.491585894 1.023084711 1 10.38948055 -8.085376254 0.981750858 0.993791921 1.485802317 0.515623176 0.162866567 0.435351528 0.80809224 0.153060174 0.055625114 8.22E-09 8.085376254 0.492010396 ASENSES(ph)EYSR ddPTM_A459_MK2206_30min_R2 1 ASENSESEYSR 11 0 Q8IXW5-2;Q8IXW5 Q8IXW5-2 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 1 ASENS(0.025)ES(0.947)EYS(0.029)R 97.273 0.01888 0 6396.4 7685.1 4886.1 7301.9 8074 6105.5 4102.2 8571.4 6224.6 5755.4 TRUE FALSE 6886.113302 7303.469109 5049.000135 6705.311412 7756.974191 6337.849081 3563.576212 9691.71141 6766.004456 5567.601769 1.236818578 1.311780083 0.906853677 1.204344651 1.393234379 1.138344541 0.640055873 1.740733589 1.215245762 1 12.44284031 -7.779998634 24.99976323 1.358491737 1.13264797 0.099407352 0.265479416 533.8724684 719129.0137 0.141976541 0.068396798 1.66E-08 7.779998634 -0.225843766 ASEPLLS(ph)PPPFGESR ddPTM_A459_MK2206_30min_R1 3 ASEPLLSPPPFGESR 15 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ASEPLLS(1)PPPFGESR;ASEPLLS(1)PPPFGESR;ASEPLLS(1)PPPFGESR 266.07 1.69E-37 97312000 6682.8 6365.6 6390.6 5071.4 5597.5 4725.38 5161.6 4194.37 4005.43 3311.55 TRUE FALSE 6114.392767 5951.198283 5956.823877 5462.000107 5374.539722 4992.926932 4817.279082 4157.699065 4421.808782 3721.809815 1.642854705 1.599006553 1.600518074 1.467565614 1.444066191 1.341531991 1.294337788 1.117117551 1.188080263 1 11.86178862 -6.977391165 0.415286374 0.997608453 1.704004369 0.969302742 0.036563769 0.186303388 0.070191832 0.036069911 0.049471316 1.05E-07 6.977391165 0.706395916 ASEPLLS(ph)PPPFGESR ddPTM_A459_MK2206_30min_R2 4 ASEPLLSPPPFGESR 15 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ASEPLLS(1)PPPFGESR;ASEPLLS(1)PPPFGESR;ASEPLLS(1)PPPFGESR;AS(0.001)EPLLS(0.999)PPPFGESR 151.73 0.00024075 94569300 129064.5 156069 135933.5 154322 117444.1 114932.2 119259 85991.7 106595.3 93606.5 TRUE FALSE 138945.7774 148318.8404 140465.455 141713.3989 112832.6545 119306.0254 103600.15 97231.11044 115866.7665 90552.12757 1.534428633 1.637938769 1.551210985 1.564992483 1.246051943 1.317539727 1.144094046 1.073758431 1.279558743 1 16.46646092 -6.475022604 1.079003618 1.129098478 1.604043549 0.839256027 0.085933099 0.182011559 0.450048187 0.039117082 0.047319488 3.35E-07 6.475022604 0.47494507 ASEQETAKEEDGS(ph)VELESQVQK ddPTM_A459_MK2206_30min_R1 1 ASEQETAKEEDGSVELESQVQK 22 1 A0A087WVF1;Q96B23-2;Q96B23;K7EQH1 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 AS(0.001)EQET(0.011)AKEEDGS(0.813)VELES(0.176)QVQK 71.927 0.0017838 5735300 1620.8 1443.8 1681.4 1585.9 1664.1 1627.6 1290.3 1722.8 1791.6 1567.5 TRUE FALSE 1482.942449 1349.808358 1567.271253 1708.046293 1597.815373 1719.753305 1204.226441 1707.737741 1977.843231 1761.693734 0.84177086 0.766199216 0.889638887 0.969547805 0.906976816 0.976193122 0.683561744 0.96937266 1.12269414 1 10.78274742 -1.522878745 0.118815039 1.067555923 0.251301003 0.242860138 0.103599728 156.0170091 1.281548762 0.784958169 21.04362326 0.03 1.522878745 -0.81625492 ASES(ph)PARGPSGSPR ddPTM_A459_MK2206_30min_R1 1 ASESPARGPSGSPR 14 1 O43237-2;O43237;J3KRZ2 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 AS(0.002)ES(0.997)PARGPS(0.001)GSPR 180.7 0.00035141 9266100 2067.4 1735.2 1921.4 2006.8 2679.7 1697 1645.4 2588.7 1048.2 785.3 TRUE FALSE 1891.556774 1622.238165 1790.980721 2161.364084 2572.961875 1793.082673 1535.638368 2566.067269 1157.164141 882.5888927 2.143191229 1.838045072 2.029235509 2.448891099 2.915243887 2.031617085 1.739924874 2.90743209 1.311102089 1 9.785597781 -8.442682437 6.137956983 1.003839419 2.236569371 0.576130598 0.381858551 0.149312846 8.457402015 0.377691919 0.097885451 3.61E-09 8.442682437 1.232729952 ASES(ph)PVHR ddPTM_A459_MK2206_30min_R2 2 ASESPVHR 8 0 Q8IY26 Q8IY26 PPAPDC2 Presqualene diphosphate phosphatase 1 AS(0.013)ES(0.987)PVHR;AS(0.002)ES(0.998)PVHR 98.044 0.013083 4415400 23271 10587.8 10187.9 12887.1 11613 15831.5 14867.9 18989 17782.3 17246.8 TRUE FALSE 25052.64565 10062.02525 10527.5595 11834.18271 11157.01527 16433.97883 12915.72687 21470.9275 19328.97231 16684.03833 1.501593629 0.603092911 0.630995883 0.709311647 0.668723905 0.985012052 0.77413673 1.2869143 1.158530802 1 14.02618091 -7.753582271 24.98520703 1.167041925 0.815989837 0.230612874 0.255994735 220.675046 701741.647 0.121495425 0.068496964 1.76E-08 7.753582271 -0.351052088 ASES(ph)SSEEKDDYEIFVK ddPTM_A459_MK2206_30min_R1 1 ASESSSEEKDDYEIFVK 17 1 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 AS(0.033)ES(0.803)S(0.082)S(0.082)EEKDDYEIFVK 61.181 0.031451 7333200 1951.6 2220.1 2308.3 1948.6 1813.3 1419.5 2098.3 1825.2 2145.9 2091.8 TRUE FALSE 1785.606172 2075.571086 2151.619027 2098.68151 1741.072421 1499.870863 1958.326236 1809.242469 2368.973984 2350.947976 0.759526025 0.882865596 0.915213373 0.892695853 0.740583134 0.637985561 0.832994288 0.769579968 1.007667549 1 11.1990269 -8.267392293 24.74664739 1.003833822 0.806555639 0.506973784 0.078819718 416.4109881 1731015.96 0.077161093 0.021994776 5.40E-09 8.267392293 -0.197278183 ASESSKPWPDATYGTGS(ph)ASR ddPTM_A459_MK2206_30min_R1 2 ASESSKPWPDATYGTGSASR 20 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ASESSKPWPDATYGT(0.004)GS(0.937)AS(0.059)R;ASESSKPWPDATYGT(0.032)GS(0.947)AS(0.021)R 149.9 8.40E-06 24610000 8010.1 8433.7 7541.7 6440.2 8608.5 7241.9 8389.3 7972.6 6548.1 5961.4 TRUE FALSE 7328.798932 7884.664597 7029.790416 6936.22532 8265.605216 7651.93012 7829.665104 7902.896399 7228.798428 6699.943238 1.093859854 1.176825581 1.049231339 1.035266281 1.233682872 1.142088798 1.168616632 1.179546769 1.078934279 1 12.70993316 -4.476909904 18.03134853 1.125638183 0.879622064 0.000837577 0.071616342 10627555.89 101095391.4 0.017686629 92241575.12 3.33E-05 4.476909904 -0.246016119 ASESSKPWPDATYGTGS(ph)ASR ddPTM_A459_MK2206_30min_R2 1 ASESSKPWPDATYGTGSASR 20 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ASESSKPWPDAT(0.002)Y(0.001)GT(0.012)GS(0.699)AS(0.287)R 64.246 0.010046 14852000 59939 73843 72524 79036 62368 70482 72153 57168 53990 70519 TRUE FALSE 64527.97593 70176.064 74941.91396 72578.50598 59919.11895 73164.2419 62679.22443 64640.05389 58685.95261 68217.97081 0.945908756 1.02870348 1.09856557 1.063920623 0.878348011 1.072506863 0.918808104 0.947551695 0.860271156 1 16.05786422 -7.022226664 1.012878638 0.925411916 1.027112152 0.206898488 0.070706634 0.794723712 1.675283955 0.046009992 0.032386895 9.50E-08 7.022226664 0.101700236 ASET(ph)PPPVAQPKPEAPHPGLETTLQER ddPTM_A459_MK2206_30min_R1 1 ASETPPPVAQPKPEAPHPGLETTLQER 27 1 Q6P1N0;Q6P1N0-2 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 AS(0.099)ET(0.901)PPPVAQPKPEAPHPGLETTLQER 77.062 7.38E-05 8578700 1060.8 1056.5 894.16 957.95 987.86 1246.4 1228 1043.5 1120.7 1156.4 TRUE FALSE 970.5733895 987.721658 833.4669105 1031.731475 948.5114444 1316.970091 1146.082361 1034.37679 1237.200775 1299.663562 0.746788182 0.759982573 0.641294358 0.793845042 0.729813062 1.01331616 0.881830032 0.795880426 0.951939264 1 10.34392249 -6.740535554 24.98816256 0.912912998 0.733905021 0.665082547 0.068471221 158.43556 189391.4181 0.022695321 0.022672324 1.82E-07 6.740535554 -0.179007977 ASFDHS(ph)PDSLPLR ddPTM_A459_MK2206_30min_R1 1 ASFDHSPDSLPLR 13 0 H0Y6H0;Q8NB78;Q8NB78-2 H0Y6H0 KDM1B Lysine-specific histone demethylase 1B 1 AS(0.006)FDHS(0.99)PDS(0.004)LPLR 99.834 0.01142 9229600 1491.7 1329.3 1499.5 1234.7 1704.6 1310.5 1791.6 1254.1 1189.9 1106.5 TRUE FALSE 1364.823082 1242.762328 1397.718118 1329.796808 1636.702172 1384.699377 1672.085633 1243.135536 1313.594363 1243.581574 1.097493812 0.999341221 1.123945664 1.06932817 1.316119672 1.113476918 1.344572538 0.999641328 1.056299314 1 10.28028543 -6.099451384 20.23313448 1.151521132 1.070867752 0.067275902 0.113819959 21.50011454 4361.96408 0.033615855 0.043398091 7.95E-07 6.099451384 -0.08065338 ASFDHS(ph)PDSLPLR ddPTM_A459_MK2206_30min_R2 2 ASFDHSPDSLPLR 13 0 H0Y6H0;Q8NB78;Q8NB78-2 H0Y6H0 KDM1B Lysine-specific histone demethylase 1B 1 ASFDHS(1)PDSLPLR;AS(0.004)FDHS(0.981)PDS(0.016)LPLR 87.831 0.01644 7558800 27210 39688 34872 46943 43589 46253 45913 30126 36742 41848 TRUE FALSE 29293.21852 37717.15163 36034.61508 43107.60674 41877.47684 48013.19033 39884.56795 34063.57164 39937.75275 40482.50319 0.723601957 0.931690203 0.890128135 1.064845386 1.034458681 1.186023258 0.985229786 0.841439362 0.986543558 1 15.30501088 -4.358314842 1.090828299 1.008908847 0.308017578 0.488630544 0.086404563 3.628947749 1.90907971 0.029562273 3.664614314 4.38E-05 4.358314842 -0.700891269 ASFNHFDK ddPTM_A459_MK2206_30min_R2 2 ASFNHFDK 8 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 105.4 0.019911 17159000 165549 180125 175022 251630 201500 234430 268500 185405 183504 188615 FALSE TRUE 178223.5587 171180.2544 180857.1461 231071.0241 193588.0975 243351.3979 233245.6275 209638.0701 199464.8462 182460.508 0.976778815 0.938177013 0.991212554 1.266416643 1.060986291 1.333720927 1.278334857 1.148950381 1.093194623 1 17.47722471 -5.666752576 6.316845248 1.181557823 0.960343991 0.461600959 0.098586519 0.17302323 9.606725906 0.026691396 0.046513767 2.15E-06 5.666752576 -0.221213831 ASFNHFDR ddPTM_A459_MK2206_30min_R2 2 ASFNHFDR 8 0 P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;H7C5W8;F6THM6;H0YJ11;Q08043;A0A494C060;A0A087WSZ2;H0YJW3 P12814-4 ACTN1;ACTN2;ACTN3 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3 0 ; 118.18 0.011938 17201000 30077 37229 37373 59555 46817 47537 54978 38252 40242 41701 FALSE TRUE 32379.71825 35380.262 38618.99717 54689.16599 44978.72934 49346.05385 47759.32256 43251.66774 43742.17642 40340.29979 0.802664294 0.877045093 0.957330446 1.355695577 1.114982526 1.223244599 1.183910948 1.072170211 1.084329483 1 15.29993418 -5.556906721 8.571385044 1.154605637 0.858727514 0.648258395 0.093120341 0.14166851 32.31898016 0.025144003 0.04392575 2.77E-06 5.556906721 -0.295878123 ASGANYS(ph)FHK ddPTM_A459_MK2206_30min_R2 1 ASGANYSFHK 10 0 H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3 H0Y5J4;B4DDD6 DBNL Drebrin-like protein 1 ASGANYS(1)FHK 72.681 0.044614 2678000 11748 13534 14343 15714 15150 16062 14681 14052 12911 13833 TRUE FALSE 12647.43591 12861.92124 14821.18846 14430.11593 14555.13488 16673.25067 12753.36706 15888.64465 14033.97544 13381.63034 0.945134157 0.961162497 1.107577185 1.078352605 1.087695184 1.245980515 0.953050319 1.187347449 1.048749299 1 13.70796628 -5.244135018 7.771251661 1.095708418 0.952442352 0.313734688 0.079578699 0.202310607 68.45176795 0.019114875 0.048084822 5.70E-06 5.244135018 -0.143266066 ASGDPGASGMS(ph)PR ddPTM_A459_MK2206_30min_R1 4 ASGDPGASGMSPR 13 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 ASGDPGASGMS(1)PR;ASGDPGASGMS(1)PR;ASGDPGASGMS(1)PR;ASGDPGASGMS(1)PR 209.22 8.71E-06 138710200 18214.7 18285.8 17605.6 15520.2 18486.8 17173.9 19188.7 15876.1 14651 13765 TRUE FALSE 16665.44412 17095.3911 16410.58092 16715.56849 17750.43161 18146.27138 17908.65683 15737.29693 16174.02388 15470.31212 1.077253257 1.105045003 1.060778916 1.080493293 1.14738678 1.172973838 1.157614449 1.017257881 1.045487884 1 13.91721468 -7.776506891 24.9994488 1.023529611 1.114281324 0.586496187 0.035991968 205.4821934 340923.433 0.022334185 0.010796607 1.67E-08 7.776506891 0.090751713 ASGDPGASGMS(ph)PR ddPTM_A459_MK2206_30min_R2 5 ASGDPGASGMSPR 13 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 ASGDPGASGMS(1)PR;ASGDPGASGMS(1)PR;ASGDPGASGMS(1)PR;ASGDPGASGMS(1)PR;ASGDPGAS(0.03)GMS(0.969)PR 138.31 0.00099486 195508500 166800 219879 169654 225753 200558 224998 203484 164527 173482 164894 TRUE FALSE 179570.3362 208960.1286 175310.1797 207308.2578 192683.0852 233560.4566 176766.3064 186031.2438 188571.1508 159513.5223 1.12573739 1.309983791 1.099030209 1.299628112 1.207942013 1.464204747 1.108158756 1.166241214 1.182164045 1 17.2833192 -8.73303356 0.874853515 1.002716032 1.238171137 0.297562861 0.105134402 1.094640588 1.695460196 0.09962557 0.034147239 1.85E-09 8.73303356 0.235455105 ASGGAQS(ph)PLR ddPTM_A459_MK2206_30min_R1 3 ASGGAQSPLR 10 0 H7BZV9;C9JU48;D3YTC9;Q6NXT1 H7BZV9 ANKRD54 Ankyrin repeat domain-containing protein 54 1 ASGGAQS(1)PLR;ASGGAQS(1)PLR;AS(0.001)GGAQS(0.999)PLR 96.23 0.021921 139734000 13912 13194.7 13561.3 11831.6 13391.8 12136.2 13625.4 13327.8 5620.9 10363.2 TRUE FALSE 12728.71135 12335.72263 12640.79674 12742.87188 12858.37625 12823.34116 12716.47443 13211.27645 6205.21267 11647.07145 1.092867971 1.059126552 1.085319755 1.094083773 1.104000804 1.100992744 1.091817327 1.134300283 0.532770207 1 13.50767963 -8.237851673 24.96469034 0.766385053 1.094095638 0.606683998 0.105934191 387.3610695 409975.5241 0.063747003 0.024062768 5.78E-09 8.237851673 0.327710585 ASGGAQS(ph)PLR ddPTM_A459_MK2206_30min_R2 1 ASGGAQSPLR 10 0 H7BZV9;C9JU48;D3YTC9;Q6NXT1 H7BZV9 ANKRD54 Ankyrin repeat domain-containing protein 54 1 ASGGAQS(1)PLR 91.093 0.028516 23514000 33317 44509 38644 49535 50185 50370 49966 38456 34974 41707 TRUE FALSE 35867.77514 42298.74778 39932.37167 45487.83205 48214.48474 52286.86565 43405.40418 43482.33124 38015.9753 40346.10401 0.889002198 1.048397332 0.98974542 1.127440509 1.19502207 1.295958233 1.075826409 1.077733088 0.9422465 1 15.30014175 -4.720486768 1.117359558 1.110308685 0.780788472 0.270175405 0.097639057 2.57713957 2.441969799 0.032916766 1.038204911 1.90E-05 4.720486768 -0.329520212 ASGQAFELILS(ph)PR ddPTM_A459_MK2206_30min_R1 6 ASGQAFELILSPR 13 0 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR 169.94 0.00024078 853153000 22653.5 21493.9 18857.5 15623 17198.3 14035.3 14124.7 12947.3 12004.2 11644.2 TRUE FALSE 20726.70087 20094.6432 17577.50544 16826.28617 16513.25529 14829.96656 13182.46703 12834.10312 13252.07955 13086.77141 1.583790243 1.535492795 1.343150644 1.285747695 1.261828054 1.133202843 1.007312394 0.980692848 1.012631698 1 13.6758216 -5.759670806 0.483049418 0.958980492 1.739781074 0.966809163 0.038828668 0.34679289 0.120753053 0.03322384 0.140672567 1.74E-06 5.759670806 0.780800582 ASGQAFELILS(ph)PR ddPTM_A459_MK2206_30min_R2 7 ASGQAFELILSPR 13 0 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;AS(0.003)GQAFELILS(0.997)PR 169.15 0.00026145 392976100 323449.7 367722.5 278368.3 322022.7 283174.3 262942.19 253094.5 192357.94 201398 234180.78 TRUE FALSE 348213.2577 349461.9354 287648.9602 295712.4153 272055.4541 272948.6393 219862.8881 217499.7832 218915.234 226539.4803 1.537097451 1.542609416 1.269752009 1.305346048 1.200918505 1.204861241 0.970527909 0.960096593 0.966344735 1 17.78940297 -5.834836601 0.461895567 0.934267183 1.69899814 0.914674493 0.062076961 0.545671146 0.178077002 0.053364144 0.208143444 1.46E-06 5.834836601 0.764730956 ASGS(ph)ENEGDYNPGR ddPTM_A459_MK2206_30min_R1 2 ASGSENEGDYNPGR 14 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 AS(0.019)GS(0.981)ENEGDYNPGR;AS(0.003)GS(0.997)ENEGDYNPGR 189.52 9.06E-05 74685000 4306.3 3775.3 3828.3 3122.2 5032.8 6011.7 5393.2 3609.8 3304.1 3317.9 TRUE FALSE 3940.026572 3529.527284 3568.445662 3362.672385 4832.332919 6352.077259 5033.429468 3578.239899 3647.573019 3728.946501 1.056605819 0.946521298 0.956958128 0.901775444 1.295897626 1.703450896 1.349826142 0.95958467 0.97817789 1 11.86455238 -6.26261973 24.99999999 1.243683675 0.963504386 0.242544726 0.211843186 159.5842283 3380018.064 0.071910642 0.086241006 5.46E-07 6.26261973 -0.280179288 ASGS(ph)ENEGDYNPGR ddPTM_A459_MK2206_30min_R2 1 ASGSENEGDYNPGR 14 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 AS(0.001)GS(0.999)ENEGDYNPGR 106.6 0.0054702 33281000 6973.2 8506.5 8378.3 9445.5 7602.7 9874.1 10522 10873 8297.8 9441.6 TRUE FALSE 7507.073553 8084.07958 8657.62834 8673.772435 7304.179797 10249.86579 9140.448761 12294.13843 9019.527645 9133.521365 0.821925439 0.88509998 0.947895997 0.949663562 0.799711251 1.122224976 1.000758458 1.346045839 0.987519193 1 13.15695547 -6.773699654 24.95673465 1.10727816 0.888641569 0.489040383 0.10678842 181.8525125 370172.5029 0.03627213 0.032219707 1.68E-07 6.773699654 -0.218636591 ASGS(ph)ENEGDYNPGRK ddPTM_A459_MK2206_30min_R1 1 ASGSENEGDYNPGRK 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 AS(0.009)GS(0.991)ENEGDYNPGRK 192.4 5.36E-05 11188000 1671.3 1819.2 1697.4 1853.1 1754.2 1974 1846.6 2135.8 1691.2 1554.7 TRUE FALSE 1529.147159 1700.769749 1582.185217 1995.826083 1684.326499 2085.766174 1723.416683 2117.126926 1867.006292 1747.307973 0.875144612 0.973365758 0.905498768 1.14222914 0.963955138 1.193702659 0.986326801 1.211650698 1.06850442 1 10.7709182 -5.753005477 24.99058875 1.085614246 0.923539272 0.448576819 0.082586454 159.7748054 473425.3861 0.020937277 0.035532594 1.77E-06 5.753005477 -0.162074974 ASGSLSPPILAPLS(ph)PGAEISPHDLSLESCR ddPTM_A459_MK2206_30min_R2 2 ASGSLSPPILAPLSPGAEISPHDLSLESCR 30 0 Q9NRF2-2;Q9NRF2-3;Q9NRF2 Q9NRF2-2 SH2B1 SH2B adapter protein 1 1 AS(0.001)GS(0.001)LS(0.006)PPILAPLS(0.99)PGAEIS(0.001)PHDLSLESCR;AS(0.017)GS(0.017)LS(0.054)PPILAPLS(0.911)PGAEIS(0.001)PHDLSLESCR 81.97 9.06E-06 15365800 25235 31499.8 25881.2 32153 31031.7 31392.6 25306.7 22472.6 24369.7 24804.3 TRUE FALSE 27167.011 29935.56574 26744.06629 29525.99705 29813.23954 32587.26739 21983.89989 25409.84598 26489.33246 23994.93772 1.132197604 1.247578389 1.11457119 1.230509426 1.242480388 1.358089267 0.916189079 1.058966949 1.103955041 1 14.55044245 -7.267020295 24.98926584 1.024691683 1.218700827 0.621162371 0.07689847 333.2982127 1492379.049 0.03209454 0.022341887 5.41E-08 7.267020295 0.194009144 ASHTAPQVLFSHR ddPTM_A459_MK2206_30min_R2 1 ASHTAPQVLFSHR 13 0 H7C3F9;O15144 H7C3F9 ARPC2 Actin-related protein 2/3 complex subunit 2 0 65.809 0.042188 3290000 6194.5 7509.1 6584 7561.5 6497.6 8376.1 8262.1 7077 6119.1 5837.8 FALSE TRUE 6668.755683 7136.209013 6803.507274 6943.701262 6242.471576 8694.858355 7177.276345 8001.988199 6651.328257 5647.313064 1.180872321 1.263646788 1.204733507 1.229558408 1.105387908 1.539645183 1.2709188 1.41695495 1.177786353 1 12.4633489 -4.760885737 24.99931806 1.262284072 1.180874412 0.005715112 0.143478543 65.07105286 2935670.584 0.034479211 0.198842382 1.73E-05 4.760885737 -0.08140966 ASIANSDGPT(ph)AGSQTPPFK ddPTM_A459_MK2206_30min_R2 1 ASIANSDGPTAGSQTPPFK 19 0 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;H9KVA6 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 ASIANS(0.005)DGPT(0.341)AGS(0.327)QT(0.327)PPFK 95.554 0.0040122 7754900 55467 57806 55634 60844 54699 53222 68231 54494 54544 60706 TRUE FALSE 59713.59617 54935.4381 57488.80979 55872.85057 52551.24242 55247.4005 59272.18774 61616.55291 59288.13853 58725.16819 1.01683142 0.93546668 0.978946703 0.951429384 0.894867465 0.940778923 1.009314908 1.049235869 1.009586526 1 15.84169132 -7.343147907 4.850489515 1.022888322 0.950777694 0.492573808 0.031739454 0.185364406 7.736022462 0.014020292 0.009321199 4.54E-08 7.343147907 -0.072110628 ASIANSDGPTAGSQT(ph)PPFK ddPTM_A459_MK2206_30min_R1 2 ASIANSDGPTAGSQTPPFK 19 0 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;H9KVA6 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 ASIANSDGPTAGS(0.002)QT(0.998)PPFK;ASIANSDGPTAGS(0.014)QT(0.986)PPFK 265.42 1.11E-47 19211800 3840 3292.6 3276.8 3147.5 3398.9 2926.6 3515.9 2979.7 2983.2 3236.4 TRUE FALSE 3513.387835 3078.251142 3054.379946 3389.920995 3263.514616 3092.301563 3281.360726 2953.648797 3293.314315 3637.349666 0.965919738 0.846289586 0.839726786 0.931975561 0.89722323 0.850152404 0.90212958 0.81203323 0.905415926 1 11.82867191 -8.547158086 22.67354837 1.000000002 0.87879052 0.399422736 0.043776237 1856.979828 1734161.212 0.040908559 0.010562544 2.84E-09 8.547158086 -0.121209482 ASIANSDGPTAGSQT(ph)PPFK ddPTM_A459_MK2206_30min_R2 2 ASIANSDGPTAGSQTPPFK 19 0 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;H9KVA6 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 ASIANSDGPTAGS(0.004)QT(0.996)PPFK;ASIANSDGPTAGS(0.002)QT(0.998)PPFK 197.1 6.94E-15 30055000 64599 64209 55096 66401 60753 61213 76270 59402 56944 70643 TRUE FALSE 69544.74911 61020.47443 56932.87314 60975.82589 58367.53196 63542.50361 66255.65738 67166.04536 61896.88619 68337.9247 1.017659659 0.892922557 0.83310802 0.892269207 0.854101617 0.929827821 0.969529843 0.982851698 0.905747233 1 16.06039882 -6.998114027 5.919359647 0.9615973 0.893437146 0.2734066 0.050735613 0.213703754 29.38312529 0.019026329 0.015938077 1.00E-07 6.998114027 -0.068160154 ASIANSDGPTAGSQT(ph)PPFKR ddPTM_A459_MK2206_30min_R1 1 ASIANSDGPTAGSQTPPFKR 20 1 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;H9KVA6 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 ASIANSDGPT(0.017)AGS(0.184)QT(0.799)PPFKR 74.206 0.0081948 21892000 3112.6 3007.7 2880.9 2704.5 3079.7 2559.9 2844.8 2857.9 2373.8 2079.8 TRUE FALSE 2847.857025 2811.898183 2685.352535 2912.801059 2957.029028 2704.839326 2655.028583 2832.913682 2620.565005 2337.461326 1.218354714 1.202970998 1.148832926 1.246138718 1.265060087 1.157169659 1.135859898 1.211961734 1.121115877 1 11.19072678 -9.135200881 0.525842495 0.98837569 1.209480805 0.710722519 0.039185954 1.309960361 0.596582918 0.073127194 0.020267347 7.32E-10 9.135200881 0.221105115 ASIANSDGPTAGSQT(ph)PPFKR ddPTM_A459_MK2206_30min_R2 4 ASIANSDGPTAGSQTPPFKR 20 1 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;H9KVA6 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 ASIANSDGPT(0.001)AGS(0.078)QT(0.921)PPFKR;ASIANSDGPTAGS(0.011)QT(0.989)PPFKR;ASIANSDGPT(0.001)AGS(0.134)QT(0.865)PPFKR;ASIANSDGPTAGS(0.017)QT(0.983)PPFKR 89.345 0.0023073 60275000 109025 136869 122337 129320 131374 120087 143276 101810 120857 122919 TRUE FALSE 117372.0378 130072.2845 126415.6545 118754.1423 126215.5967 124656.9949 124463.6891 115116.9166 131368.9234 118908.1631 0.987081415 1.093888604 1.063136888 0.998704708 1.061454431 1.048346822 1.046721149 0.968116179 1.104793144 1 16.85948823 ASIDS(ph)SLENLSTASSR ddPTM_A459_MK2206_30min_R1 2 ASIDSSLENLSTASSR 16 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 ASIDS(0.918)S(0.082)LENLSTASSR;ASIDS(0.907)S(0.075)LENLS(0.016)T(0.002)ASSR 161.94 4.30E-05 9915700 3740.02 3130.09 3054.45 3034.66 3502.03 3464.73 3267.01 3152.81 2630.25 2282.24 TRUE FALSE 3421.911659 2926.320572 2847.122444 3268.390039 3362.536729 3660.900018 3049.073724 3125.245315 2903.6739 2564.981121 1.334088439 1.140874117 1.109997427 1.274235515 1.310940148 1.427261974 1.188731449 1.218428194 1.13204494 1 11.32473249 -8.509562987 1.455332085 1.001497867 1.253979237 0.455586431 0.08800505 0.437375084 2.044800875 0.091478296 0.027224592 3.09E-09 8.509562987 0.25248137 ASIDSS(ph)LENLSTASSR ddPTM_A459_MK2206_30min_R2 2 ASIDSSLENLSTASSR 16 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 ASIDS(0.286)S(0.713)LENLSTASSR;ASIDS(0.324)S(0.676)LENLSTASSR 211.12 4.03E-08 6607700 30400 41320 33105 36740 34080 35854 31392 28559 30785 28313 TRUE FALSE 32727.44737 39268.10888 34208.70418 33738.22447 32741.84796 37218.44909 27270.19269 32291.75936 33462.62365 27389.14913 1.194905589 1.433710434 1.248987474 1.231809879 1.195431366 1.358875696 0.995656804 1.178998267 1.22174747 1 14.74131683 -8.307089597 0.117707908 0.803646351 1.49493509 0.389811112 0.100531141 8.719745536 0.878374809 2.541945813 2.119776801 4.93E-09 8.307089597 0.691288739 ASIGQS(ph)PGLPSTTFK ddPTM_A459_MK2206_30min_R1 2 ASIGQSPGLPSTTFK 15 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 AS(0.005)IGQS(0.834)PGLPS(0.122)T(0.037)T(0.002)FK;ASIGQS(0.681)PGLPS(0.236)T(0.065)T(0.018)FK 150.92 0.00025643 96678000 15306.4 14586.1 13920.7 10975.5 13713.5 10951.9 12725.2 10882.7 10950.7 10577.6 TRUE FALSE 14004.5103 13636.54224 12975.80167 11820.83491 13167.26226 11571.98711 11876.32513 10787.5537 12089.06445 11888.03294 1.178034278 1.147081464 1.091501153 0.994347422 1.107606474 0.973414792 0.999015159 0.907429661 1.01691041 1 13.5372224 -5.055054595 0.505900528 0.969914357 1.295475272 0.698212951 0.044502523 1.869578836 0.449265449 0.028762655 0.350226752 8.81E-06 5.055054595 0.325560915 ASIGQS(ph)PGLPSTTFK ddPTM_A459_MK2206_30min_R2 3 ASIGQSPGLPSTTFK 15 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ASIGQS(0.977)PGLPS(0.014)T(0.004)T(0.004)FK;ASIGQS(0.673)PGLPS(0.252)T(0.075)TFK;AS(0.009)IGQS(0.99)PGLPSTTFK 184.21 2.11E-05 89259600 257459 270060 256011 283530 266789 244673 286209 218699 213837 250632 TRUE FALSE 277170.259 256649.2131 264546.279 260364.692 256313.5234 253984.2025 248629.4145 247283.7102 232436.1557 242453.8984 1.143187471 1.058548511 1.091119923 1.073872987 1.05716396 1.047556687 1.025470888 1.019920537 0.958681866 1 17.88735093 -6.893233256 0.525553469 0.980907576 1.10772407 0.776746058 0.022837123 0.445400492 0.26380451 0.019863245 0.022468735 1.28E-07 6.893233256 0.126816495 ASIHEAWTDGK ddPTM_A459_MK2206_30min_R1 2 ASIHEAWTDGK 11 0 O43707;O43707-2;P12814-4;P12814-3;P12814;P12814-2;H9KV75 O43707;P12814-4 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 0 ; 105.13 0.016677 41199000 21334.8 13459.1 15989.4 12516.7 23728 22672 23041.9 18224.3 12323.8 12462.7 FALSE TRUE 19520.16323 12582.91014 14904.08408 13480.7384 22782.86352 23955.66905 21504.81689 18064.96687 13604.90311 14006.67336 1.393633072 0.89835108 1.064070225 0.962451115 1.626572058 1.710303969 1.535326507 1.289739997 0.971315798 1 13.77382673 -6.247385666 24.91038956 1.39675728 1.065566975 0.204891131 0.25815131 1089.630386 1931383.839 0.079409818 0.101979012 5.66E-07 6.247385666 -0.331190305 ASIHEAWTDGK ddPTM_A459_MK2206_30min_R2 3 ASIHEAWTDGK 11 0 O43707;O43707-2;P12814-4;P12814-3;P12814;P12814-2;H9KV75 O43707;P12814-4 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 0 ;; 123.62 0.0053531 46373500 185460 379266 293211 503608 486452 494980 471458 343438 406918 305083 FALSE TRUE 199658.9602 360432.2019 302986.5084 462461.6154 467351.4503 513816.8107 409554.9983 388326.5258 442310.9921 295128.1667 0.676516113 1.221273476 1.026626878 1.566985695 1.583554208 1.740995502 1.387719115 1.315789442 1.498708161 1 18.17098209 -4.640430813 0.999112058 1.457794692 0.168797369 0.50446933 0.217336103 1.957091717 1.30416994 0.071287788 2.901155386 2.29E-05 4.640430813 -1.288997322 ASISVHS(ph)PQK ddPTM_A459_MK2206_30min_R1 1 ASISVHSPQK 10 0 O43572;E7EMD6;J3QR74 O43572 AKAP10 "A-kinase anchor protein 10, mitochondrial" 1 ASISVHS(1)PQK 96.604 0.02152 2375600 2370.5 1384.7 1841.7 1348.6 3357.8 2941.3 2651.9 2113.3 1213.4 1246.9 TRUE FALSE 2168.876527 1294.555778 1716.690535 1452.469406 3224.051716 3107.833864 2474.99659 2094.823641 1339.537272 1401.375386 1.547677053 0.923775165 1.225004059 1.03645991 2.300633898 2.21770262 1.766119639 1.494834048 0.95587327 1 10.45262775 -6.201293851 24.9998931 1.684211218 1.167680226 0.18542058 0.439337818 386.7096094 160737.8328 0.135845733 0.175376052 6.29E-07 6.201293851 -0.516530991 ASLAS(ph)LDSNPSTNEK ddPTM_A459_MK2206_30min_R1 2 ASLASLDSNPSTNEK 15 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 ASLAS(0.941)LDS(0.022)NPS(0.036)T(0.001)NEK;ASLAS(0.994)LDS(0.006)NPSTNEK 278.85 4.32E-55 14404100 5024.1 6247.2 6691.2 6202.6 6996.3 5116.7 5323.3 5727.5 5360.2 4896.8 TRUE FALSE 4596.773912 5840.506145 6237.019987 6680.325327 6717.622556 5406.403132 4968.19237 5677.425071 5917.411972 5503.452553 0.835252756 1.061244026 1.133292225 1.213842631 1.220619691 0.98236572 0.90274102 1.031611523 1.075218132 1 12.42612125 ASLAS(ph)LDSNPSTNEK ddPTM_A459_MK2206_30min_R2 2 ASLASLDSNPSTNEK 15 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 ASLAS(0.998)LDS(0.001)NPSTNEK;ASLAS(1)LDSNPSTNEK 248.81 6.36E-79 11748000 76505 110827 89543 90461 90307 75416 106414 74487 87670 81076 TRUE FALSE 82362.28162 105323.4923 92528.31893 83070.04693 86761.09342 78286.00873 92441.71397 84222.70665 95295.37813 78430.49676 1.050130817 1.342889522 1.17974924 1.059154925 1.106216294 0.998157757 1.178645014 1.073851501 1.215029639 1 16.25912712 -5.624861469 5.720108584 1.094221274 1.211592756 0.19664014 0.092222242 0.282891163 13.39172368 0.023784802 0.041778069 2.37E-06 5.624861469 0.117371483 ASLASLDS(ph)NPSTNEK ddPTM_A459_MK2206_30min_R1 1 ASLASLDSNPSTNEK 15 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 ASLAS(0.005)LDS(0.689)NPS(0.011)T(0.295)NEK 213.71 4.79E-07 10601000 4123.5 4627.3 4466.8 4482.5 4377 3228.3 4047.1 3855.3 3786.1 4025.9 TRUE FALSE 3772.774672 4326.061929 4163.606061 4827.742927 4202.654822 3411.083556 3777.125343 3821.593519 4179.678644 4524.658886 0.833825216 0.956107861 0.920203305 1.066984948 0.928833516 0.753887451 0.834786763 0.844614725 0.923755525 1 12.14359332 -6.543837251 24.99056842 0.85740308 0.950218375 0.14893725 0.080152632 354.2814081 422436.2262 0.026196021 0.026198364 2.86E-07 6.543837251 0.092815294 ASLASLDS(ph)NPSTNEK ddPTM_A459_MK2206_30min_R2 1 ASLASLDSNPSTNEK 15 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 ASLAS(0.075)LDS(0.909)NPS(0.013)T(0.002)NEK 147.64 0.00032013 12624000 36024 40416 44961 39530 37959 33335 43818 29521 39071 36886 TRUE FALSE 38782.02514 38409.00021 46459.9773 36300.27255 36468.53893 34603.58678 38064.64397 33379.49606 42469.32496 35682.41284 1.086866668 1.07641264 1.302041359 1.017315525 1.022031192 0.969765888 1.066762053 0.935460733 1.190203284 1 15.12292555 ASLENS(ph)LR ddPTM_A459_MK2206_30min_R1 2 ASLENSLR 8 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 ASLENS(1)LR;ASLENS(1)LR 99.788 0.016808 0 5595.9 5276.4 6481 4405.1 6336.7 5363.8 9199.2 6183.9 5446.9 5642 TRUE FALSE 5119.93932 4932.905401 6041.087777 4744.381565 6084.295821 5667.493721 8585.538153 6129.834814 6013.124747 6340.973555 0.807437419 0.77794133 0.952706666 0.748210275 0.959520769 0.893789206 1.353977915 0.966702473 0.948296771 1 12.63048864 -6.812879137 2.373911177 1.064631687 0.835548393 0.386509087 0.126065221 0.301121839 3.475439906 0.049069075 0.043903949 1.54E-07 6.812879137 -0.229083294 ASLGS(ph)LEGEAEAEAS(ph)SPK ddPTM_A459_MK2206_30min_R2 1 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 AS(0.001)LGS(0.999)LEGEAEAEAS(0.679)S(0.321)PK 177.44 3.69E-08 2730800 17019 14852 17169 13138 15312 9466 20212 12896 13352 18551 TRUE FALSE 18321.98773 14114.47128 17741.40589 12064.58337 14710.77394 9826.235263 17558.14012 14581.55148 14513.33283 17945.68239 1.020969129 0.786510703 0.988616956 0.672283344 0.8197389 0.547554284 0.978404707 0.812538145 0.808736749 1 14.13134916 -2.003874028 1.187844882 0.807707571 199.9999704 0.140762474 0.136901619 2739.413513 5.349835515 0.038954662 1485072.971 0.009911194 2.003874028 199.1922629 ASLGS(ph)LEGEAEAEAS(ph)SPKGK ddPTM_A459_MK2206_30min_R1 2 ASLGSLEGEAEAEASSPKGK 20 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 AS(0.013)LGS(0.987)LEGEAEAEAS(0.85)S(0.15)PKGK;AS(0.016)LGS(0.984)LEGEAEAEAS(0.718)S(0.282)PKGK 102.27 0.0012848 22105000 9478.3 11904.2 13124.1 17528.7 11121.1 9017.7 7188 13614.4 5280.4 2331.9 TRUE FALSE 8672.120812 11129.23442 12233.27266 18878.76351 10678.12304 9528.274381 6708.501635 13495.37074 5829.316476 2620.793377 3.308967769 4.246513485 4.667774562 7.20345361 4.074385692 3.635645017 2.559721684 5.149345559 2.224256413 1 11.3557879 -8.61074886 0.548962894 0.913330927 4.693701676 0.449843952 1.208825631 1.048484664 0.733117403 1.447471355 0.63177618 2.45E-09 8.61074886 3.780370749 ASLGS(ph)LEGEAEAEASS(ph)PK ddPTM_A459_MK2206_30min_R1 4 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 ASLGS(1)LEGEAEAEAS(0.018)S(0.982)PK;ASLGS(1)LEGEAEAEAS(0.208)S(0.792)PK;AS(0.004)LGS(0.996)LEGEAEAEAS(0.287)S(0.713)PK;ASLGS(1)LEGEAEAEAS(0.287)S(0.713)PK 258.89 2.90E-41 63708000 10743.7 15838.5 14673.9 12663.7 9213.29 7735.26 10086.2 11475.2 13921.5 13332 TRUE FALSE 9829.891898 14807.41077 13677.87655 13639.06037 8846.30515 8173.223737 9413.368001 11374.87354 15368.68974 14983.66881 0.656040388 0.988236657 0.912852301 0.910261735 0.590396468 0.545475467 0.628241863 0.759151425 1.025696039 1 13.8711033 -11.02620068 13.69545394 1.000000035 0.775990381 0.13982342 0.1637818 1.93E-07 6.97E-09 0.17305386 0.04197172 9.41E-12 11.02620068 -0.224009655 ASLGS(ph)LEGEAEAEASS(ph)PK ddPTM_A459_MK2206_30min_R2 3 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 AS(0.002)LGS(0.998)LEGEAEAEAS(0.088)S(0.912)PK;ASLGS(1)LEGEAEAEAS(0.1)S(0.9)PK;AS(0.003)LGS(0.997)LEGEAEAEAS(0.005)S(0.995)PK 227.57 2.02E-17 12028100 95335 87631 97462 85821 83558 69508 112745 86039 73764 120556 TRUE FALSE 102633.9209 83279.37197 100711.3344 78809.14977 80277.09307 72153.17565 97941.44607 97284.59272 80179.85939 116622.2676 0.880054239 0.714094947 0.863568652 0.675764169 0.688351331 0.618691243 0.839817713 0.834185398 0.687517582 1 16.83148375 -10.89209672 6.306459366 1.000025864 0.754135567 0.412433204 0.087427988 3.22E-05 3.22E-06 0.085605519 0.020760207 1.28E-11 10.89209672 -0.245890297 ASLGS(ph)LEGEAEAEASSPK ddPTM_A459_MK2206_30min_R1 7 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 AS(0.036)LGS(0.964)LEGEAEAEASSPK;AS(0.002)LGS(0.998)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK;AS(0.001)LGS(0.999)LEGEAEAEASSPK 334.96 1.20E-144 997571000 25820.69 31229.76 32578.82 29728.61 29282.72 26032.63 30192.95 29297.48 26544.6 23218.51 TRUE FALSE 23624.50473 29196.69695 30367.46047 32018.31269 28116.32726 27506.57501 28178.8334 29041.33522 29304.00616 26094.99431 0.905327069 1.118861978 1.163727423 1.226990599 1.077460563 1.054093926 1.079855893 1.11290828 1.122974231 1 14.67148547 -9.445483683 15.56548131 0.999990907 1.100602898 0.114610167 0.07887052 0 0 0.078376777 0.019009161 3.59E-10 9.445483683 0.100611992 ASLGS(ph)LEGEAEAEASSPK ddPTM_A459_MK2206_30min_R2 6 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGS(1)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK;AS(0.001)LGS(0.999)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK 256.33 9.22E-35 360662800 71968 90832 86686 88570.8 93257 88609 103971 81442 85570.1 102353 TRUE FALSE 77477.92541 86321.41496 89576.06797 81334.28232 89595.2616 91981.07759 90319.48281 92086.74903 93012.83262 99013.22999 0.782500737 0.871816978 0.904687868 0.821448632 0.904881717 0.928977649 0.912196106 0.930044894 0.939398024 1 16.59533369 -1.522878747 0.116447859 1.037607468 0.346669051 0.755655232 0.028932353 51.43969786 0.41564016 0.226497639 5.742098624 0.03 1.522878747 -0.690938416 ASLGSLEGEAEAEAS(ph)SPK ddPTM_A459_MK2206_30min_R1 3 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.5)S(0.5)PK;ASLGSLEGEAEAEAS(0.5)S(0.5)PK;ASLGSLEGEAEAEAS(0.878)S(0.122)PK 276.34 2.85E-55 650744000 18204.5 22267.1 22665.7 19070.7 11488.2 10901.9 15612.2 14767.4 19285 19643.2 TRUE FALSE 16656.11168 20817.50774 21127.21543 20539.52862 11030.60067 11519.15616 14570.73862 14638.29018 21289.74476 22076.74791 0.754464006 0.942960794 0.956989477 0.930369305 0.499647897 0.521777764 0.66000385 0.663063701 0.964351491 1 14.43024005 -6.227118024 24.87907422 0.688568933 0.903878694 0.21013411 0.162910085 788.6186332 571658.5621 0.048530385 0.0626494 5.93E-07 6.227118024 0.215309761 ASLGSLEGEAEAEAS(ph)SPK ddPTM_A459_MK2206_30min_R2 5 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.63)S(0.37)PK;ASLGSLEGEAEAEAS(0.574)S(0.426)PK;ASLGSLEGEAEAEAS(0.579)S(0.421)PK;ASLGSLEGEAEAEAS(0.895)S(0.105)PK;ASLGSLEGEAEAEAS(0.538)S(0.462)PK 241.64 3.80E-25 139191200 181569 167635 169840 119846 132762 97651 185138 126096 113072 182540 TRUE FALSE 195470.0622 159310.4897 175502.3808 110054.1984 127549.0968 101367.1772 160829.1582 142577.1802 122906.7982 176583.7347 1.106953947 0.902180996 0.993876254 0.623240858 0.722315093 0.574045947 0.91078127 0.807419666 0.69602559 1 17.42999294 -5.74122243 24.6729073 0.750668647 0.991121654 0.420696638 0.127898882 197.9414611 241566.8773 0.0340008 0.058793742 1.81E-06 5.74122243 0.240453007 ASLGSLEGEAEAEAS(ph)SPKGK ddPTM_A459_MK2206_30min_R2 1 ASLGSLEGEAEAEASSPKGK 20 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.559)S(0.441)PKGK 120.41 0.00013779 19816000 13604 65384 47333 40157 91154 47722 68159 38041 73127 40536 TRUE FALSE 14645.5327 62137.12564 48911.0586 36876.04464 87574.83595 49538.09415 59209.64143 43013.08931 79487.45428 39213.31364 0.37348368 1.584592575 1.247307459 0.940396034 2.233293436 1.263297833 1.509937211 1.096900142 2.027052725 1 15.25905594 -4.756570343 24.82381075 1.437483293 0.373481896 0.383080774 0.403582528 141.0596725 719072.5954 0.09517671 0.759783346 1.75E-05 4.756570343 -1.064001397 ASLGSLEGEAEAEASS(ph)PK ddPTM_A459_MK2206_30min_R1 4 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.233)S(0.767)PK;ASLGSLEGEAEAEAS(0.057)S(0.943)PK;ASLGSLEGEAEAEAS(0.366)S(0.634)PK;ASLGSLEGEAEAEAS(0.06)S(0.94)PK 352.97 7.62E-184 301469000 21033.4 25619.1 25642 21224.5 12999.8 13486.2 17088.2 17045.1 21941.3 21241.7 TRUE FALSE 19244.39888 23951.29193 23901.49248 22859.21467 12481.99044 14249.77699 15948.27736 16896.07649 24222.17665 23873.28216 0.806106121 1.00326766 1.001181669 0.957522913 0.522843502 0.596892245 0.668038741 0.70773999 1.014614433 1 14.54310931 -6.215353366 24.86957906 0.725152849 0.950620448 0.250555847 0.157014097 496.1624596 267745.8496 0.046899202 0.060546394 6.09E-07 6.215353366 0.225467599 ASLGSLEGEAEAEASS(ph)PK ddPTM_A459_MK2206_30min_R2 6 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.175)S(0.825)PK;ASLGSLEGEAEAEAS(0.201)S(0.799)PK;ASLGSLEGEAEAEAS(0.057)S(0.943)PK;ASLGSLEGEAEAEAS(0.074)S(0.926)PK;ASLGSLEGEAEAEAS(0.009)S(0.991)PK;ASLGSLEGEAEAEAS(0.065)S(0.935)PK 309.33 2.06E-111 297912800 228028 211807.5 242879 168708.3 194176.8 125997.7 234927 184124.2 159203.5 240826 TRUE FALSE 245485.999 201289.4475 250976.4646 154924.2922 186552.4432 130792.6308 204080.8027 208189.8651 173050.7327 232967.8673 1.053733297 0.864022364 1.077300778 0.665002835 0.800764695 0.561419187 0.876004082 0.893641975 0.742809447 1 17.82977146 -5.757343344 24.99996311 0.781281524 0.984919168 0.355183717 0.126901835 115.5661977 705340.8732 0.034124317 0.056471031 1.75E-06 5.757343344 0.203637644 ASLGSLEGEAEAEASS(ph)PKGK ddPTM_A459_MK2206_30min_R1 4 ASLGSLEGEAEAEASSPKGK 20 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.128)S(0.872)PKGK;ASLGSLEGEAEAEAS(0.05)S(0.95)PKGK;ASLGSLEGEAEAEAS(0.117)S(0.883)PKGK;ASLGSLEGEAEAEAS(0.129)S(0.871)PKGK 198.61 7.08E-16 301167000 12471.9 13441.6 14290 18997.4 12273.1 9193.58 6986.44 14815.3 5583.98 1757.5 TRUE FALSE 11411.09941 12566.5494 13320.03461 20460.58304 11784.23644 9714.112555 6520.387335 14685.77139 6164.454703 1975.232368 5.777092151 6.362061293 6.743527914 10.35857014 5.966000065 4.91795938 3.301073554 7.434958858 3.120875701 1 10.94780667 -8.561412479 0.432981567 0.738046063 7.172396487 0.520811213 1.709938176 1.141550805 0.5403042 2.587171269 1.284862565 2.75E-09 8.561412479 6.434350424 ASLGSLEGEAEAEASS(ph)PKGK ddPTM_A459_MK2206_30min_R2 3 ASLGSLEGEAEAEASSPKGK 20 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.073)S(0.927)PKGK;ASLGSLEGEAEAEAS(0.051)S(0.949)PKGK;ASLGSLEGEAEAEAS(0.062)S(0.938)PKGK 148.64 1.02E-05 64144000 25150.6 102667 72251 69253 135424 72195 103516 52113 131795 54697 TRUE FALSE 27076.14927 97568.70607 74659.81228 63594.80837 130106.5733 74942.43131 89924.22485 58924.34803 143258.2909 52912.24137 0.511718056 1.843972275 1.41101209 1.201892166 2.45891253 1.416353369 1.699497555 1.113624116 2.707469711 1 15.69131391 -4.755519021 24.95915334 1.651859187 0.511716164 0.291526228 0.53248323 237.2986102 1000306.466 0.123534112 1.088772404 1.76E-05 4.755519021 -1.140143023 ASLLHSMPTHS(ph)SPR ddPTM_A459_MK2206_30min_R1 2 ASLLHSMPTHSSPR 14 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4X8;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 ASLLHSMPT(0.018)HS(0.491)S(0.491)PR;ASLLHSMPT(0.174)HS(0.695)S(0.131)PR 120.59 0.0013525 26666000 7753 6662.1 7553 6257.7 8825.2 8448.5 8483 8219 6085 5292.1 TRUE FALSE 7093.566637 6228.396079 7040.323404 6739.669138 8473.673596 8926.846769 7917.114548 8147.14215 6717.557525 5947.725301 1.192652027 1.0471896 1.183700162 1.133150708 1.424691486 1.500884173 1.331116376 1.369791263 1.12943305 1 12.5381223 -6.239645236 23.2556904 1.323477035 1.135783305 0.202837961 0.141278926 432.0504933 461022.9622 0.040986747 0.052846582 5.76E-07 6.239645236 -0.18769373 ASLLHSMPTHS(ph)SPR ddPTM_A459_MK2206_30min_R2 1 ASLLHSMPTHSSPR 14 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4X8;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 ASLLHS(0.001)MPT(0.137)HS(0.431)S(0.431)PR 71.286 0.0365 27459000 31500 54708 46489 67715 66036 81385 68485 47755 56334 47638 TRUE FALSE 33911.66422 51991.28027 48038.92006 62182.46789 63443.09484 84482.1632 59492.83723 53996.74247 61233.82949 46083.57596 0.735873107 1.12819544 1.04243039 1.349341204 1.376696437 1.833238012 1.290977013 1.171713378 1.328756031 1 15.49196505 -4.922471719 1.040075179 1.360118797 0.57470531 0.408150669 0.211939829 1.503247899 1.550897208 0.07268263 1.247247826 1.20E-05 4.922471719 -0.785413488 ASLLHSMPTHSS(ph)PR ddPTM_A459_MK2206_30min_R1 1 ASLLHSMPTHSSPR 14 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4X8;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 ASLLHS(0.002)MPT(0.013)HS(0.321)S(0.664)PR 106.29 0.008647 0 899.23 848.28 1120.6 1029.2 1205.6 1105.2 1295.4 982.47 654.12 735.81 TRUE FALSE 822.7457665 793.0568178 1044.536794 1108.469162 1157.578399 1167.775469 1208.98623 973.8803684 722.1181148 826.9676979 0.994894684 0.958993707 1.263092618 1.340402007 1.399786717 1.412117392 1.461950972 1.177652248 0.873211997 1 9.691687167 -3.61503233 13.9254439 1.212786186 1.154055112 0 0.207198472 0 0 0.051257952 0 0.000242643 3.61503233 -0.058731073 ASLLHSMPTHSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 ASLLHSMPTHSSPR 14 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4X8;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 ASLLHSMPT(0.026)HS(0.37)S(0.604)PR 70.451 0.030016 7312000 15552 35818 28113 46853 40072 46839 37493 31726 44460 29227 TRUE FALSE 16742.67308 34039.3302 29050.27339 43024.96002 38498.57193 48621.49097 32570.12406 35872.69713 48327.05043 28273.32538 0.592172051 1.203937978 1.027479895 1.521750959 1.361657018 1.719694812 1.151973587 1.268782382 1.709280736 1 14.78715396 -4.565370095 1.070579228 1.39307097 1.19E-14 0.480904198 0.236158308 2.203387298 1.531623492 0.071825788 3.896365174 2.72E-05 4.565370095 -1.39307097 ASLLT(ph)DEEDVDMALDQR ddPTM_A459_MK2206_30min_R1 3 ASLLTDEEDVDMALDQR 17 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;H7C3P6 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ASLLT(1)DEEDVDMALDQR;ASLLT(1)DEEDVDMALDQR;ASLLT(1)DEEDVDMALDQR 334.51 9.71E-136 5626700 1441.03 1576.8 1617.09 1536.42 1694.08 1469.53 1515.593 1557.92 1248.877 1056.3 TRUE FALSE 1318.462831 1474.150033 1507.326436 1654.755335 1626.601206 1552.733519 1414.490556 1544.29927 1378.702233 1187.162419 1.11060021 1.241742503 1.269688471 1.393874426 1.370158944 1.307936887 1.191488657 1.300832342 1.161342552 1 10.21330161 -8.587086864 2.254025048 0.999805222 1.27866654 0.5407619 0.077985157 0.300527936 3.5145397 0.080462892 0.022061913 2.59E-09 8.587086864 0.278861318 ASLLT(ph)DEEDVDMALDQR ddPTM_A459_MK2206_30min_R2 4 ASLLTDEEDVDMALDQR 17 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;H7C3P6 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 AS(0.001)LLT(0.999)DEEDVDMALDQR;ASLLT(1)DEEDVDMALDQR;ASLLT(1)DEEDVDMALDQR;ASLLT(1)DEEDVDMALDQR 170.48 2.83E-06 2121170 6318.92 6129.8 9158.9 7896.05 6157.37 8151.89 8587.36 5041.77 7086.68 5886.96 TRUE FALSE 6802.701374 5825.403046 9464.253155 7250.917457 5915.600715 8462.115886 7459.829317 5700.74665 7703.066617 5694.868977 1.194531674 1.022921347 1.661891291 1.273236924 1.038759757 1.485919328 1.309921149 1.0010321 1.352632808 1 12.47544693 -10.78760629 4.610796558 0.999894413 1.259300619 0.132002111 0.200078465 0.000216286 3.45E-05 0.192940772 0.046776023 1.63E-11 10.78760629 0.259406206 ASLQSGQEGAGDS(ph)PGSQFSK ddPTM_A459_MK2206_30min_R2 1 ASLQSGQEGAGDSPGSQFSK 20 0 Q12778 Q12778 FOXO1 Forkhead box protein O1 1 ASLQSGQEGAGDS(0.793)PGS(0.207)QFSK 320.27 2.39E-135 4048500 32548 36621 34932 38770 29228 23800 25491 18865 19138 22493 TRUE FALSE 35039.89991 34802.45439 36096.61545 35602.36698 28080.36186 24705.72568 22144.00108 21330.72027 20802.58865 21759.05525 1.610359434 1.599446942 1.658923838 1.636209227 1.290513836 1.135422719 1.017691293 0.980314633 0.956042825 1 14.4093283 -6.579666397 1.576576278 0.988200302 1.637982777 0.983956794 0.036795396 0.045146106 0.230360826 0.016076427 0.016903581 2.63E-07 6.579666397 0.649782475 ASLQSGQEGAGDSPGS(ph)QFSK ddPTM_A459_MK2206_30min_R2 1 ASLQSGQEGAGDSPGSQFSK 20 0 Q12778 Q12778 FOXO1 Forkhead box protein O1 1 ASLQSGQEGAGDS(0.064)PGS(0.936)QFSK 184.66 4.38E-14 5594000 19292 21840 20372 20384 17742 15410 13748 11937 11964 15136 TRUE FALSE 20769.01035 20755.45736 21051.19231 18718.56199 17045.35993 15996.43835 11942.87109 13497.20689 13004.60709 14642.11356 1.418443469 1.417517852 1.437715411 1.278405738 1.164132477 1.09249517 0.815652128 0.921807281 0.888164611 1 13.8378362 -6.528173268 1.121908324 0.897630371 1.429736685 0.931141733 0.058728508 0.110033968 0.293437349 0.027633417 0.031444842 2.96E-07 6.528173268 0.532106314 ASLS(ph)CSALGSSPVHR ddPTM_A459_MK2206_30min_R2 1 ASLSCSALGSSPVHR 15 0 O60269 O60269 GPRIN2 G protein-regulated inducer of neurite outgrowth 2 1 AS(0.166)LS(0.785)CS(0.049)ALGSSPVHR 121.03 0.0011395 7100500 10134 10217 7363.8 11380 15524 15459 15555 9198.2 13899 9510.3 TRUE FALSE 10909.86683 9709.638637 7609.305417 10450.2176 14914.44976 16047.30308 13512.60982 10400.43632 15107.9099 9199.97969 1.185857708 1.055397834 0.827100241 1.135895725 1.621139422 1.744275924 1.468765179 1.130484705 1.642167744 1 13.16741496 -6.096566812 5.38002832 1.456180815 1.019154859 0.405155352 0.229398402 0.215104894 9.476510458 0.068685774 0.090127498 8.01E-07 6.096566812 -0.437025956 ASLS(ph)DLTDLEDIEGLTVR ddPTM_A459_MK2206_30min_R1 1 ASLSDLTDLEDIEGLTVR 18 0 J3KSI3;J3KSU7;K7EN88;Q8WZ73-3;Q8WZ73-2;Q8WZ73 J3KSI3 RFFL;hCG_2039718 E3 ubiquitin-protein ligase rififylin 1 AS(0.274)LS(0.724)DLT(0.002)DLEDIEGLTVR 209.33 1.38E-11 4457900 165 0 167.36 133.62 221 307.13 386.03 62.868 282.72 301.31 TRUE FALSE 150.9658836 0 156.0000695 143.9114356 212.197102 324.5194352 360.2786431 62.3183517 312.1097557 338.6385576 0.445802405 0 0.460668362 0.424970613 0.626618255 0.958306217 1.063903194 0.184026155 0.921660422 1 8.403602438 -6.115313701 1.621976711 0.786932944 0.255550766 0.443707911 0.259860399 0.374644765 1.966793706 0.091797526 0.140087896 7.67E-07 6.115313701 -0.531382178 ASLS(ph)PDASDFEHITAETPSRPLSSTSNPFK ddPTM_A459_MK2206_30min_R1 1 ASLSPDASDFEHITAETPSRPLSSTSNPFK 30 1 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 AS(0.07)LS(0.682)PDAS(0.246)DFEHIT(0.001)AETPSRPLSSTSNPFK 60.979 0.00095709 34753000 2098.1 1829.9 2354.3 1936.4 2999.3 2508.4 2911.7 2228.5 2180.6 1973.1 TRUE FALSE 1919.645577 1710.773177 2194.496675 2085.541864 2879.83153 2650.42344 2717.465806 2209.016459 2407.281173 2217.542524 0.86566348 0.771472546 0.989607483 0.94047435 1.298658988 1.195207493 1.225440223 0.996155174 1.085562575 1 11.11474605 -5.79028941 1.890239972 1.13711403 0.833243672 0.560816921 0.103904714 0.244392743 1.782759231 0.033254147 0.065294046 1.62E-06 5.79028941 -0.303870357 ASLSPDASDFEHIT(ph)AETPSRPLSSTSNPFK ddPTM_A459_MK2206_30min_R2 1 ASLSPDASDFEHITAETPSRPLSSTSNPFK 30 1 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 ASLSPDAS(0.002)DFEHIT(0.694)AET(0.029)PS(0.029)RPLS(0.029)S(0.038)T(0.09)S(0.09)NPFK 68.895 0.00018659 7467700 19415 23348 23274 28437 31851 25135 32077 22926 28276 26219 TRUE FALSE 20901.42733 22188.57227 24049.94354 26113.60613 30600.3697 26091.53004 27865.25137 25922.50692 30735.39537 25363.47618 0.824075816 0.874823787 0.948211648 1.029575203 1.206473809 1.028704814 1.098636921 1.022040778 1.211797435 1 14.63046487 -5.596507536 1.827653622 1.09370964 0.842587762 0.669604708 0.068672031 0.20400558 1.350859244 0.019922381 0.049834313 2.53E-06 5.596507536 -0.251121878 ASLSPDASDFEHITAETPSRPLSSTS(ph)NPFK ddPTM_A459_MK2206_30min_R2 2 ASLSPDASDFEHITAETPSRPLSSTSNPFK 30 1 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 ASLSPDAS(0.013)DFEHIT(0.069)AET(0.069)PS(0.084)RPLS(0.083)S(0.083)T(0.083)S(0.515)NPFK;ASLSPDAS(0.004)DFEHIT(0.041)AET(0.004)PS(0.017)RPLS(0.184)S(0.04)T(0.04)S(0.669)NPFK 70.449 0.00010546 15500800 25627 40270 36107 42874 44253 39989 45211 34145 41064 34385 TRUE FALSE 27589.02282 38270.25036 37310.78936 39371.05705 42515.40487 41510.80942 39274.74139 38607.86874 44635.67249 33263.02027 0.829420257 1.150534439 1.121689764 1.183628448 1.278158283 1.247956712 1.18073287 1.160684401 1.34190077 1 15.02163155 -4.260807489 1.357992777 1.204625877 1.03E-11 0.594189391 0.088064052 2.985330674 1.85298108 0.023947933 7.005364047 5.49E-05 4.260807489 -1.204625876 ASLTGS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 ASLTGSPSR 9 0 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 ASLT(0.011)GS(0.987)PS(0.002)R;ASLT(0.01)GS(0.985)PS(0.005)R 100.82 0.017575 22481000 95072 123317 74148 124528 122687 172600 155950 126051 109035 102968 TRUE FALSE 102350.7854 117193.2571 76620.05731 114353.6641 117869.6919 179168.4139 135473.5777 142526.2985 118518.6672 99608.16259 1.027534117 1.176542705 0.769214644 1.148035071 1.183333663 1.798732245 1.36006502 1.430869668 1.189848945 1 16.60397635 -6.351393793 3.064625037 1.387860058 1.015739104 0.315181876 0.218263714 0.278788529 5.066846462 0.069967221 0.082092743 4.45E-07 6.351393793 -0.372120954 ASLVALPEQT(ph)ASEEETPPPLLTK ddPTM_A459_MK2206_30min_R2 1 ASLVALPEQTASEEETPPPLLTK 23 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 AS(0.002)LVALPEQT(0.494)AS(0.317)EEET(0.187)PPPLLTK 67.951 0.0045921 1452500 9267 10903 9255.1 11424 10628 9391.1 10654 8040.4 9582.3 11533 TRUE FALSE 9976.488645 10361.57287 9563.660415 10490.62266 10210.69132 9748.484891 9255.117002 9091.307887 10415.75113 11156.67915 0.894216685 0.928732711 0.857213897 0.940299753 0.915208834 0.87378016 0.829558408 0.814875803 0.933588838 1 13.44562004 -6.768736708 24.56180798 0.874990232 0.907403445 0 0.053880803 378.6065975 1274328.716 0.018179323 0.016369103 1.70E-07 6.768736708 0.032413213 ASLVALPEQTAS(ph)EEETPPPLLTK ddPTM_A459_MK2206_30min_R2 2 ASLVALPEQTASEEETPPPLLTK 23 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 ASLVALPEQT(0.02)AS(0.977)EEET(0.003)PPPLLTK;ASLVALPEQT(0.07)AS(0.893)EEET(0.036)PPPLLTK 94.031 6.08E-05 2841700 52715.4 66702.8 66997 82219 76947 63620 77464 59486.8 64094 73448 TRUE FALSE 56751.33156 63390.43595 69230.64654 75501.44469 73925.67415 66041.10368 67292.88375 67261.92901 69668.78026 71051.39778 0.798736314 0.892177183 0.974374167 1.062631378 1.040453481 0.929483525 0.947101477 0.94666581 0.980540601 1 16.11657541 -4.984111443 2.341320665 0.984804577 0.790324765 0.696031938 0.039387851 0.24631344 2.217921172 0.012111775 0.082775701 1.04E-05 4.984111443 -0.194479811 ASLVS(ph)EEEEDEEEDK ddPTM_A459_MK2206_30min_R1 1 ASLVSEEEEDEEEDK 15 0 Q96GN5-5;Q96GN5-2;Q96GN5;C9J8L0;C9IZR6;Q96GN5-4;C9JFL7 Q96GN5-5 CDCA7L Cell division cycle-associated 7-like protein 1 AS(0.319)LVS(0.681)EEEEDEEEDK 100.58 0.0049605 299010000 6802 1266.7 1076.3 768.92 11357 11190 10640 6323 1158.1 1395.1 TRUE FALSE 6223.454181 1184.2376 1003.243755 828.1423516 10904.62664 11823.56813 9930.225014 6267.718678 1278.488639 1567.93552 3.969202879 0.75528463 0.639850135 0.52817373 6.954767271 7.540850995 6.333312106 3.997433948 0.815396183 1 10.61465052 -3.819916035 16.05629841 3.426458013 3.647364059 0 2.728613694 0 0 0.696370895 0 0.000151385 3.819916035 0.220906047 ASLVS(ph)EEEEDEEEDKATPR ddPTM_A459_MK2206_30min_R1 2 ASLVSEEEEDEEEDKATPR 19 1 Q96GN5-5;Q96GN5-2;Q96GN5;C9J8L0;C9IZR6;Q96GN5-4 Q96GN5-5 CDCA7L Cell division cycle-associated 7-like protein 1 AS(0.01)LVS(0.99)EEEEDEEEDKATPR;AS(0.002)LVS(0.998)EEEEDEEEDKATPR 150.13 1.55E-05 18758100 2006.97 2467.8 2570.3 2285.5 2004.84 2037.86 2462.7 2319.2 2802.2 2874.9 TRUE FALSE 1836.266662 2307.145771 2395.835197 2461.529606 1924.982977 2153.241872 2298.417776 2298.923479 3093.498718 3231.064316 0.568316345 0.71405133 0.741500312 0.761832438 0.595773649 0.666418759 0.711350054 0.711506567 0.957424061 1 11.65779375 -8.276967918 3.166091385 1.001208572 0.683791951 0.81240451 0.057012785 0.104531045 2.014997268 0.053720829 0.01529538 5.28E-09 8.276967918 -0.317416622 ASLVS(ph)EEEEDEEEDKATPR ddPTM_A459_MK2206_30min_R2 2 ASLVSEEEEDEEEDKATPR 19 1 Q96GN5-5;Q96GN5-2;Q96GN5;C9J8L0;C9IZR6;Q96GN5-4 Q96GN5-5 CDCA7L Cell division cycle-associated 7-like protein 1 AS(0.005)LVS(0.995)EEEEDEEEDKATPR;AS(0.003)LVS(0.997)EEEEDEEEDKATPR 134.58 0.00011193 28729000 51614 48582 51568 50045 40481 34354 52439 45067 37731 61329 TRUE FALSE 55565.60752 46169.48852 53287.25138 45956.16341 38891.51254 35661.36554 45553.69631 50957.41164 41012.77418 59327.83975 0.93658572 0.7782095 0.898182904 0.7746138 0.655535625 0.601089905 0.767830019 0.858912306 0.691290537 1 15.85642163 -5.89693439 5.640572133 0.744900939 0.860761865 0.14941508 0.111450264 0.361717305 16.90345897 0.031329835 0.047102813 1.27E-06 5.89693439 0.115860926 ASMSEFLES(ph)EDGEVEQQR ddPTM_A459_MK2206_30min_R1 6 ASMSEFLESEDGEVEQQR 18 0 J3QQW9;Q15022 J3QQW9 SUZ12 Polycomb protein SUZ12 1 ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR 305.9 2.21E-96 58408900 8149.96 8763.11 8923.09 8071.66 9504.77 8337.02 8919.32 8340.92 7244.69 6215.53 TRUE FALSE 7456.763105 8192.629946 8317.415512 8693.340652 9126.174884 8809.054868 8324.328437 8267.996216 7997.801451 6985.556781 1.067454369 1.172795556 1.190658923 1.244473551 1.306434858 1.261038331 1.191648525 1.183584426 1.144905367 1 12.77015939 -8.734606926 1.327466168 1.000465934 1.210048836 0.513621166 0.059662112 0.68457313 2.291227113 0.062659699 0.018769421 1.84E-09 8.734606926 0.209582902 ASMSEFLES(ph)EDGEVEQQR ddPTM_A459_MK2206_30min_R2 6 ASMSEFLESEDGEVEQQR 18 0 J3QQW9;Q15022 J3QQW9 SUZ12 Polycomb protein SUZ12 1 ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR 210.57 2.96E-30 11925200 53477.1 70765.8 58022.9 72610.7 72034.8 64745.3 68656.3 56270.7 59949.7 64870.7 TRUE FALSE 57571.34789 67251.67328 59957.35453 66678.17354 69206.35181 67209.22776 59641.64534 63625.4737 65164.01654 62753.97437 0.917413574 1.071671937 0.955435176 1.062533078 1.10282022 1.070995557 0.950404272 1.013887556 1.038404614 1 15.93741921 -4.747822765 24.941206 1.029829157 0.917413288 0.33079281 0.047857043 855.9105737 1567655.882 0.012403225 0.242211433 1.79E-05 4.747822765 -0.112415869 ASNTS(ph)TPTKGNTETSASASQTNHVK ddPTM_A459_MK2206_30min_R2 2 ASNTSTPTKGNTETSASASQTNHVK 25 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8Y7Y0;A0A2R8YCQ1;A0A2R8YD28 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 AS(0.019)NT(0.111)S(0.257)T(0.257)PT(0.257)KGNT(0.083)ET(0.013)S(0.002)ASASQTNHVK;AS(0.161)NT(0.117)S(0.338)T(0.257)PT(0.102)KGNT(0.023)ET(0.002)S(0.001)ASASQTNHVK 62.442 0.001898 43387000 21099 44127 33482 48127 47238 45015 55365 34756 43517 38802 TRUE FALSE 22714.35566 41935.71735 34598.27317 44194.87015 45383.19877 46728.07737 48095.50899 39298.72854 47302.03 37535.89392 0.605136931 1.117216429 0.921738356 1.177402895 1.209061355 1.24489049 1.281320464 1.046963971 1.260181258 1 15.19598322 -4.405832551 1.075440266 1.174983215 5.69E-20 0.643447886 0.117214777 2.185603115 1.208475666 0.035423677 3.554175892 3.93E-05 4.405832551 -1.174983215 ASNTST(ph)PTKGNTETSASASQTNHVK ddPTM_A459_MK2206_30min_R1 2 ASNTSTPTKGNTETSASASQTNHVK 25 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8Y7Y0;A0A2R8YCQ1;A0A2R8YD28 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 AS(0.019)NT(0.047)S(0.135)T(0.4)PT(0.396)KGNT(0.003)ETSASASQTNHVK;AS(0.006)NT(0.053)S(0.144)T(0.394)PT(0.394)KGNT(0.008)ETSASASQTNHVK 93.416 1.03E-05 23044000 2701.6 1943.99 2430.8 1704.74 3400 2948.3 3060.7 3207.6 2213.05 1508.38 TRUE FALSE 2471.814733 1817.435898 2265.804069 1836.03937 3264.5708 3115.230198 2856.526288 3179.556291 2443.104467 1695.249502 1.45808315 1.07207576 1.336560822 1.083049644 1.925717009 1.837623426 1.685018214 1.875568338 1.441147432 1 10.72728191 -6.254298497 24.93748181 1.684671663 1.232710329 0.313707311 0.274917774 547.3341568 1911406.108 0.076903844 0.097164216 5.57E-07 6.254298497 -0.451961334 ASNTSTPT(ph)KGNTETSASASQTNHVK ddPTM_A459_MK2206_30min_R1 1 ASNTSTPTKGNTETSASASQTNHVK 25 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8Y7Y0;A0A2R8YCQ1;A0A2R8YD28 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 ASNT(0.002)S(0.009)T(0.006)PT(0.983)KGNTETSASASQTNHVK 115.01 1.08E-07 4860400 699.58 373.19 396.78 440.37 895.91 676.1 513.77 662.48 383.22 426.65 TRUE FALSE 640.0770474 348.8952632 369.8476791 474.2873737 860.2240076 714.3801977 479.4973407 656.6880072 423.0570904 479.506623 1.334865916 0.727613022 0.771308802 0.989115376 1.793977322 1.489823421 0.999980642 1.369507689 0.882275802 1 8.905406932 -6.024265819 24.90780984 1.28404997 0.915783265 0.195865773 0.294004263 1015.660615 1042530.81 0.0877856 0.113964436 9.46E-07 6.024265819 -0.368266704 ASNTSTPT(ph)KGNTETSASASQTNHVK ddPTM_A459_MK2206_30min_R2 1 ASNTSTPTKGNTETSASASQTNHVK 25 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8Y7Y0;A0A2R8YCQ1;A0A2R8YD28 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 ASNT(0.003)S(0.009)T(0.021)PT(0.702)KGNT(0.176)ET(0.062)S(0.017)AS(0.005)AS(0.005)QT(0.001)NHVK 79.589 0.00029547 5878600 3287.2 8137.1 5952.6 9491.8 11589 13390 9977.9 7244.2 11109 7003.2 TRUE FALSE 3538.870559 7733.023446 6151.056713 8716.289577 11133.95763 13899.56583 8667.789744 8191.041813 12075.24074 6774.686158 0.522366716 1.141458551 0.907947109 1.286596807 1.643464711 2.051691475 1.279437828 1.20906587 1.782405924 1 12.7259384 -5.869186437 2.701731509 1.5207201 0.867970874 0.448456776 0.314651727 0.253719779 3.746704921 0.094751184 0.156363324 1.35E-06 5.869186437 -0.652749226 ASPAAAEEVVPEWAS(ph)CLKSPR ddPTM_A459_MK2206_30min_R2 1 ASPAAAEEVVPEWASCLKSPR 21 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 ASPAAAEEVVPEWAS(0.783)CLKS(0.217)PR 107.07 7.39E-05 2969000 17283 23603 22280 23700 24361 20791 23034 18754 21572 19114 TRUE FALSE 18606.19977 22430.90934 23022.80408 21763.63419 23404.46474 21582.21607 20009.60813 21205.21219 23448.29357 18490.31175 1.0062675 1.213116883 1.245127957 1.177029056 1.265769072 1.167217534 1.082167159 1.146828268 1.268139439 1 14.17448193 -7.006560959 24.72383128 1.134829821 1.189509591 0.074527452 0.090591113 754.5019104 2843222.832 0.032342844 0.027503507 9.85E-08 7.006560959 0.05467977 ASPAAAEEVVPEWASCLKS(ph)PR ddPTM_A459_MK2206_30min_R2 1 ASPAAAEEVVPEWASCLKSPR 21 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 ASPAAAEEVVPEWAS(0.494)CLKS(0.506)PR 110.94 5.80E-05 3004200 12926 13787 12442 13206 14217 15419 15621 9728.4 9994.8 11576 TRUE FALSE 13915.6245 13102.35763 12856.81007 12127.02756 13658.76915 16005.78085 13569.94394 10999.93528 10864.12964 11198.27607 1.242657746 1.170033454 1.14810619 1.082937006 1.219720702 1.429307578 1.211788659 0.982288275 0.970160904 1 13.45098903 -7.760691794 9.862873836 0.981918882 1.214072357 0.611235669 0.084338483 0.070763763 122.7102247 0.047864875 0.025343578 1.74E-08 7.760691794 0.232153475 ASPAPGS(ph)GHPEGPGAHLDMNSLDR ddPTM_A459_MK2206_30min_R2 2 ASPAPGSGHPEGPGAHLDMNSLDR 24 0 O94826 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 1 AS(0.018)PAPGS(0.982)GHPEGPGAHLDMNSLDR;AS(0.113)PAPGS(0.887)GHPEGPGAHLDMNSLDR 83.359 7.80E-05 140495000 72051 57932 81012.4 76052 70783 81208 121089 48249.3 97171 81566 TRUE FALSE 77567.27996 55055.18112 83713.31298 69838.30832 68003.70376 84298.42735 105189.8688 54555.64917 105622.7579 78904.5081 0.983052576 0.697744431 1.060944615 0.88509909 0.861848143 1.06836009 1.333128758 0.69141359 1.338614998 1 16.26782011 -6.786286046 9.423590277 1.08271407 0.894989921 0.196218317 0.190721604 0.490972283 173.4912208 0.063302132 0.056613396 1.64E-07 6.786286046 -0.187724149 ASPAPSDSSPGEPFVGGPVS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 ASPAPSDSSPGEPFVGGPVSSPR 23 0 O60346 O60346 PHLPP1 PH domain leucine-rich repeat-containing protein phosphatase 1 1 ASPAPSDSSPGEPFVGGPVS(0.868)S(0.132)PR 169.77 2.32E-12 3457800 489.55 540.43 560.61 540.18 541.2 559.92 750.76 400.93 663.88 598.75 TRUE FALSE 447.9112018 505.2479088 522.5573551 581.7847572 519.642858 591.6221865 700.6781702 397.4247113 732.8927017 672.9276703 0.665615669 0.750820528 0.776543124 0.864557638 0.772212053 0.879176489 1.041238459 0.590590533 1.089110664 1 9.394307635 -2.210375292 0.151221143 1.018384796 5.21E-12 0.329230316 0.126718849 71.81359147 0.860214957 0.443332188 15.46818561 0.006160624 2.210375292 -1.018384796 ASPAPSDSSPGEPFVGGPVS(ph)SPR ddPTM_A459_MK2206_30min_R2 1 ASPAPSDSSPGEPFVGGPVSSPR 23 0 O60346 O60346 PHLPP1 PH domain leucine-rich repeat-containing protein phosphatase 1 1 ASPAPSDSSPGEPFVGGPVS(0.785)S(0.215)PR 150.13 8.10E-08 2078100 17849 20130 16780 19962 16229 19578 19713 12961 14537 20809 TRUE FALSE 19215.53316 19130.37347 17339.43683 18331.04074 15591.76792 20323.05451 17124.65942 14655.0472 15801.40198 20130.00403 0.954571749 0.950341264 0.861372745 0.910632741 0.774553641 1.009590186 0.850703228 0.728020083 0.784967651 1 14.29705984 -4.674954041 0.579571274 0.844583574 1.059189459 0.117171889 0.087655578 8.509192787 1.988291137 0.047120097 1.263188121 2.11E-05 4.674954041 0.214605885 ASPAPSDSSPGEPFVGGPVSS(ph)PR ddPTM_A459_MK2206_30min_R1 1 ASPAPSDSSPGEPFVGGPVSSPR 23 0 O60346 O60346 PHLPP1 PH domain leucine-rich repeat-containing protein phosphatase 1 1 ASPAPSDSSPGEPFVGGPVS(0.36)S(0.64)PR 140.95 2.25E-07 0 276.41 277.91 312.32 296.42 282.25 147.2 295.95 392.45 217.37 181.77 TRUE FALSE 252.899878 259.8180085 291.1205886 319.2503198 271.0073848 155.5343368 276.2077155 389.018851 239.9663894 204.2890399 1.237951278 1.271815701 1.42504262 1.562738363 1.32658798 0.761344499 1.35204373 1.904257082 1.174641525 1 7.674467995 -5.019944386 20.64406798 1.337459935 1.246416829 0.001535012 0.291955595 490.8412918 508104.1576 0.077341155 0.213378171 9.55E-06 5.019944386 -0.091043106 ASPAPSDSSPGEPFVGGPVSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 ASPAPSDSSPGEPFVGGPVSSPR 23 0 O60346 O60346 PHLPP1 PH domain leucine-rich repeat-containing protein phosphatase 1 1 ASPAPSDSSPGEPFVGGPVS(0.311)S(0.689)PR 210.98 1.47E-36 0 5396.1 4379.6 3817.7 6047.8 4135.8 6831.2 6193.1 4268 4770.1 6274.3 TRUE FALSE 5809.229565 4162.115433 3944.980213 5553.675394 3973.407711 7091.166103 5379.938531 4825.842254 5184.994676 6069.570105 0.957107252 0.685734798 0.6499604 0.915003089 0.65464401 1.168314391 0.886378844 0.795087983 0.854260613 1 12.56737862 -6.720007462 24.99999847 0.924601311 0.768780494 0.279346128 0.133848378 218.2664083 131701.1919 0.044333929 0.044333509 1.91E-07 6.720007462 -0.155820817 ASPDQNASTHT(ph)PQSSVK ddPTM_A459_MK2206_30min_R1 2 ASPDQNASTHTPQSSVK 17 0 Q14677-2;Q14677;Q14677-3;H0YD52 Q14677-2 CLINT1 Clathrin interactor 1 1 ASPDQNASTHT(0.984)PQS(0.011)S(0.004)VK;ASPDQNASTHT(0.905)PQS(0.047)S(0.047)VK 133.94 0.00080132 30716000 6939.7 3489.3 5300.6 3686.8 9417.2 8807.1 9242.5 7658.3 4175.8 4127.5 TRUE FALSE 6349.442073 3262.145936 4940.81004 3970.757975 9042.092983 9305.750391 8625.949689 7591.344291 4609.889353 4638.845861 1.3687547 0.703223611 1.065094678 0.855979719 1.949211777 2.006048631 1.859503408 1.636472631 0.993757821 1 12.17955019 -6.251600597 24.90582406 1.641850377 0.981962571 0.361313052 0.368319885 653.5818406 1654471.393 0.110301016 0.140634969 5.60E-07 6.251600597 -0.659887806 ASPDQNASTHT(ph)PQSSVK ddPTM_A459_MK2206_30min_R2 5 ASPDQNASTHTPQSSVK 17 0 Q14677-2;Q14677;Q14677-3;H0YD52 Q14677-2 CLINT1 Clathrin interactor 1 1 ASPDQNASTHT(0.998)PQS(0.001)SVK;ASPDQNASTHT(0.992)PQS(0.006)S(0.002)VK;ASPDQNASTHT(0.395)PQS(0.395)S(0.211)VK;ASPDQNAS(0.023)T(0.023)HT(0.939)PQS(0.014)SVK;ASPDQNASTHT(0.996)PQS(0.004)S(0.001)VK 198.6 9.33E-08 67650100 64921.4 157200 113214.4 206377.8 173594.8 207843.1 206416.8 146018.1 173224.7 128309.2 TRUE FALSE 69891.8323 149393.6766 116988.9116 189516.0736 166778.5959 215752.7148 179314.0262 165103.167 188291.4713 124122.4813 0.563087618 1.203598857 0.94252798 1.526847285 1.343661472 1.738224313 1.444653896 1.330163281 1.516981205 1 16.92140492 -4.610082601 0.881741354 1.435969188 3.08E-13 0.547808623 0.219883649 2.111127392 1.04591193 0.07413584 3.14961771 2.45E-05 4.610082601 -1.435969188 ASPEPQRENAS(ph)PAPGTTAEEAMSR ddPTM_A459_MK2206_30min_R1 2 ASPEPQRENASPAPGTTAEEAMSR 24 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 ASPEPQRENAS(1)PAPGTTAEEAMSR;ASPEPQRENAS(0.999)PAPGTTAEEAMSR 143.32 9.43E-09 48882000 3132.8 2812.1 3167.7 3446.8 4377.4 2654.2 2754.4 3635.5 1773.91 999.49 TRUE FALSE 2866.338909 2629.031779 2952.68535 3712.273133 4203.038889 2804.47851 2570.659002 3603.715207 1958.314292 1123.314367 2.551680094 2.340423889 2.628547659 3.304749981 3.74164082 2.49661056 2.288459115 3.208109246 1.743335926 1 10.13354602 -8.474810147 3.848448569 1.006831367 2.812470472 0.645465918 0.445316984 0.130199155 4.179976774 0.465752396 0.1224344 3.35E-09 8.474810147 1.805639104 ASPEPQRENAS(ph)PAPGTTAEEAMSR ddPTM_A459_MK2206_30min_R2 1 ASPEPQRENASPAPGTTAEEAMSR 24 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 ASPEPQRENAS(0.62)PAPGT(0.284)T(0.097)AEEAMSR 118.41 8.27E-08 16555000 2971.9 9158 7579.6 9542.5 13156 12387 8814.4 5522.4 11428 6560.5 TRUE FALSE 3199.430949 8703.227037 7832.300081 8762.847225 12639.42934 12858.39596 7657.058692 6244.196641 12421.98678 6346.431422 0.504130705 1.371357612 1.234126639 1.380751897 1.991580543 2.026082866 1.206514052 0.983890982 1.957318366 1 12.63172988 -4.648581952 1.758226637 1.505452415 2.34E-29 0.364804237 0.377421699 1.569674958 3.745976865 0.10715828 4.421533552 2.25E-05 4.648581952 -1.505452415 ASPEPQRENASPAPGT(ph)TAEEAMSR ddPTM_A459_MK2206_30min_R2 1 ASPEPQRENASPAPGTTAEEAMSR 24 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 ASPEPQRENAS(0.072)PAPGT(0.45)T(0.45)AEEAMS(0.029)R 92.133 5.02E-05 14745000 8415.5 23226 13837 16205 15700 15246 16046 13530 13555 15333 TRUE FALSE 9059.79715 22072.63061 14298.31867 14880.99966 15083.53911 15826.19721 13939.14093 15298.41746 14733.9894 14832.68547 0.610799519 1.488107509 0.963973699 1.003257279 1.016912221 1.066981246 0.939758411 1.031399034 0.993346042 1 13.8564922 ASPITNDGEDEFVPS(ph)DGLDKDEYTFSPGK ddPTM_A459_MK2206_30min_R1 1 ASPITNDGEDEFVPSDGLDKDEYTFSPGK 29 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 ASPITNDGEDEFVPS(0.661)DGLDKDEY(0.13)T(0.166)FS(0.043)PGK 56.156 0.0027838 2920400 1472.3 1551.7 1733.8 1398 1253.5 1319.3 1329.9 1664.8 1510.5 1383.1 TRUE FALSE 1347.073154 1450.684048 1616.114487 1505.674202 1203.570441 1393.997626 1241.184798 1650.244829 1667.52188 1554.44887 0.866592128 0.933246552 1.039670405 0.968622533 0.774274705 0.896779336 0.798472579 1.061626961 1.072741544 1 10.60218745 -7.786597529 24.98815295 1.050388333 0.901752618 0.450238074 0.074718223 233.7561106 232173.1105 0.044167454 0.021230298 1.63E-08 7.786597529 -0.148635716 ASPITNDGEDEFVPS(ph)DGLDKDEYTFSPGK ddPTM_A459_MK2206_30min_R2 3 ASPITNDGEDEFVPSDGLDKDEYTFSPGK 29 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 ASPITNDGEDEFVPS(0.886)DGLDKDEY(0.079)T(0.036)FSPGK;ASPITNDGEDEFVPS(0.737)DGLDKDEY(0.114)T(0.133)FS(0.016)PGK;ASPITNDGEDEFVPS(0.991)DGLDKDEY(0.003)T(0.006)FSPGK 140.04 8.81E-15 0 51976.8 57624 54532 56375.3 47944.6 39283 63359 46618.9 37819.2 56067.9 TRUE FALSE 55956.18377 54762.47595 56350.06966 51769.25765 46062.0541 40777.94209 55039.88719 52712.1503 41108.64565 54238.40901 1.031670818 1.009662284 1.038932939 0.954475963 0.849251572 0.75182777 1.014776949 0.971860186 0.757924991 1 15.72702724 -5.97949904 3.970214892 0.889127792 1.023866994 0.335565526 0.085575764 0.259840954 9.238882005 0.025687811 0.037713485 1.05E-06 5.97949904 0.134739202 ASPITNDGEDEFVPSDGLDKDEY(ph)TFSPGK ddPTM_A459_MK2206_30min_R2 1 ASPITNDGEDEFVPSDGLDKDEYTFSPGK 29 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 ASPIT(0.002)NDGEDEFVPS(0.046)DGLDKDEY(0.662)T(0.272)FS(0.017)PGK 113.13 4.14E-08 0 9008.6 9245 9064.3 11205 8333.1 6208.9 12777 8075.9 7280.2 7467.1 TRUE FALSE 9698.305342 8785.906743 9366.499238 10289.51566 8005.900624 6445.18404 11099.36455 9131.447859 7913.418636 7223.449139 1.342614194 1.216303538 1.296679614 1.42446018 1.108321035 0.89225852 1.536574058 1.264139566 1.095518012 1 12.81847216 -14.5228787 0.14686559 0.135128166 1.322226443 0.18497906 0.168564266 264.3358794 2.320343655 66.5823076 0.946942322 3.00E-15 14.5228787 1.187098277 ASPITNDGEDEFVPSDGLDKDEYT(ph)FSPGK ddPTM_A459_MK2206_30min_R2 2 ASPITNDGEDEFVPSDGLDKDEYTFSPGK 29 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 ASPITNDGEDEFVPS(0.002)DGLDKDEY(0.021)T(0.924)FS(0.053)PGK;ASPITNDGEDEFVPSDGLDKDEY(0.146)T(0.747)FS(0.107)PGK 115.55 6.08E-08 0 23644 25963 23830 25659 22935 15401.9 31725 23083 15313.6 25891 TRUE FALSE 25454.20282 24673.71517 24624.48031 23562.57762 22034.45666 15988.0301 27559.46939 26100.02736 16645.54925 25046.17879 1.016290869 0.985128924 0.983163161 0.940765369 0.879753229 0.638342089 1.100346269 1.042076221 0.664594363 1 14.61230289 -5.943948558 2.837904956 0.888741436 0.994971495 0.106808994 0.139441382 0.677871969 11.09351622 0.043022779 0.066824825 1.14E-06 5.943948558 0.106230059 ASPNS(ph)DEDKPEVPPR ddPTM_A459_MK2206_30min_R2 3 ASPNSDEDKPEVPPR 15 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 AS(0.334)PNS(0.666)DEDKPEVPPR;AS(0.08)PNS(0.92)DEDKPEVPPR;AS(0.097)PNS(0.903)DEDKPEVPPR 93.228 0.0069784 19605600 40980 34363.2 37383 42326 37436.9 32275.4 47618 38511 31583 39343 TRUE FALSE 44117.46031 32656.77346 38629.33056 38867.83041 35966.9392 33503.66296 41365.6994 43544.51993 34330.03225 38059.24113 1.159178665 0.858051093 1.014979001 1.021245544 0.945025127 0.880302969 1.086876621 1.144124755 0.90201568 1 15.21595918 -7.298219574 24.99709623 1.045264652 0.976165742 0.061154907 0.097579155 1405.877091 955477.7564 0.039479667 0.026617811 5.03E-08 7.298219574 -0.06909891 ASPS(ph)PQPSSQPLQIHR ddPTM_A459_MK2206_30min_R1 4 ASPSPQPSSQPLQIHR 16 0 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 AS(0.178)PS(0.822)PQPSSQPLQIHR;ASPS(0.998)PQPS(0.002)SQPLQIHR;ASPS(1)PQPSSQPLQIHR;AS(0.066)PS(0.933)PQPSSQPLQIHR 312.38 3.95E-102 291796000 9055.9 8198.5 8435.52 7170.29 9140.16 9354.4 9255.5 8367.38 7591.53 7599.61 TRUE FALSE 8285.648151 7664.77616 7862.940405 7722.546978 8776.088073 9884.038044 8638.082483 8294.224879 8380.69671 8541.107061 0.970090656 0.897398441 0.920599677 0.904162297 1.027511775 1.157231489 1.011353964 0.971094826 0.981219021 1 13.06020736 -6.267754204 23.91596503 1.029245685 0.921053664 0.48216316 0.051474849 255.5946325 968005.3161 0.017234005 0.020045991 5.40E-07 6.267754204 -0.10819202 ASPS(ph)PQPSSQPLQIHR ddPTM_A459_MK2206_30min_R2 7 ASPSPQPSSQPLQIHR 16 0 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 AS(0.244)PS(0.756)PQPSSQPLQIHR;AS(0.002)PS(0.996)PQPSS(0.001)QPLQIHR;AS(0.174)PS(0.825)PQPS(0.001)SQPLQIHR;AS(0.002)PS(0.998)PQPSSQPLQIHR;ASPS(1)PQPSSQPLQIHR;ASPS(1)PQPSSQPLQIHR;AS(0.002)PS(0.998)PQPSSQPLQIHR 302.34 3.55E-88 335660200 120545.8 147107.7 126710.9 168154.1 155617.9 147046 152068.8 116603 131597.9 124779.4 TRUE FALSE 129774.8791 139802.5455 130935.3782 154415.3721 149507.5593 152641.9386 132101.9839 131843.4125 143044.0475 120707.8584 1.075115414 1.158189263 1.084729527 1.27924871 1.238590108 1.264556762 1.094394231 1.092252105 1.185043371 1 16.88116008 -11.03649218 6.58131774 0.999895808 1.165538799 0.309495773 0.073242375 0.000119805 8.85E-06 0.075877378 0.018391437 9.19E-12 11.03649218 0.165642992 ASPS(ph)TAGETPSGVK ddPTM_A459_MK2206_30min_R1 1 ASPSTAGETPSGVK 14 0 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 AS(0.161)PS(0.725)T(0.114)AGETPSGVK 98.253 0.010524 11140000 671.31 882.68 890.4 828.69 749.51 762.51 767.4 1030 938.98 590.89 TRUE FALSE 614.2115593 825.2173716 829.9621288 892.5158474 719.6554296 805.6826573 716.2081462 1020.994819 1036.590331 664.0939142 0.924886595 1.242621494 1.249766202 1.343960287 1.083665148 1.213205904 1.07847419 1.53742535 1.560909246 1 9.375243467 -7.757125469 24.99999288 1.41187548 1.17472917 0.195747512 0.181094975 143.0661467 829112.0549 0.085283336 0.04702021 1.75E-08 7.757125469 -0.23714631 ASPSCS(ph)SPTR ddPTM_A459_MK2206_30min_R1 1 ASPSCSSPTR 10 0 Q8N5I9;A0A087WT30;J3KN91 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPS(0.004)CS(0.685)S(0.307)PT(0.004)R 89.679 0.030504 154340000 6585.5 6293.8 6078.7 4929.3 5846.8 5876.2 6495.1 5795.4 2030.7 4816.6 TRUE FALSE 6025.368643 5884.072476 5666.09478 5308.95554 5613.909575 6208.905366 6061.82373 5744.731429 2241.798532 5413.316771 1.113064115 1.086962527 1.046695588 0.980721388 1.037055434 1.146968786 1.11979845 1.061222107 0.414126612 1 12.4022971 -8.153519757 9.999380228 0.707809701 1.073892485 0.529476003 0.138421101 0.265020124 22.45939116 0.085652629 0.032306721 7.02E-09 8.153519757 0.366082784 ASPSCS(ph)SPTR ddPTM_A459_MK2206_30min_R2 2 ASPSCSSPTR 10 0 Q8N5I9;A0A087WT30;J3KN91 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPS(0.069)CS(0.455)S(0.455)PT(0.021)R;ASPS(0.014)CS(0.684)S(0.272)PT(0.03)R 108.43 0.010684 466602000 71563 70325 73653 81192 75841 67878 73079 62998 67205 68359 TRUE FALSE 77041.9183 66832.76276 76108.55426 74558.35388 72863.10127 70461.14485 63483.63952 71232.0549 73050.36942 66128.45143 1.165034363 1.010650655 1.150919954 1.127477693 1.101841941 1.065519354 0.960004932 1.077177121 1.104673826 1 16.0129835 -6.858481102 3.936365299 1.038662668 1.10893773 0.307037135 0.053491629 0.31245611 9.086670787 0.019560815 0.017313482 1.39E-07 6.858481102 0.070275062 ASPSCS(ph)SPTRDSSGVPVSK ddPTM_A459_MK2206_30min_R1 3 ASPSCSSPTRDSSGVPVSK 19 1 Q8N5I9;A0A087WT30;J3KN91 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPS(0.007)CS(0.487)S(0.487)PT(0.018)RDSSGVPVSK;ASPSCS(0.573)S(0.355)PT(0.017)RDS(0.042)S(0.012)GVPVSK;AS(0.014)PS(0.118)CS(0.394)S(0.394)PT(0.03)RDS(0.036)S(0.014)GVPVSK 216.53 2.33E-18 62424800 7702.4 7035.2 8703.3 9572 11218.5 7953.1 6451.4 11383.2 2852.71 1580.52 TRUE FALSE 7047.270433 6577.207201 8112.544245 10309.2371 10771.64339 8403.397649 6021.038877 11283.67788 3149.259413 1776.32675 3.967327764 3.702701207 4.567033765 5.803682852 6.063998862 4.730772449 3.389600972 6.352253538 1.772905471 1 10.79468127 -5.265957921 22.41400585 4.513609065 3.835014487 0 1.692747456 395.2501735 1960682.721 0.418861199 0.925866214 5.42E-06 5.265957921 -0.678594578 ASPSCS(ph)SPTRDSSGVPVSK ddPTM_A459_MK2206_30min_R2 2 ASPSCSSPTRDSSGVPVSK 19 1 Q8N5I9;A0A087WT30;J3KN91 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 AS(0.008)PS(0.159)CS(0.665)S(0.139)PT(0.019)RDS(0.005)S(0.005)GVPVSK;AS(0.01)PS(0.174)CS(0.669)S(0.139)PT(0.007)RDSSGVPVSK 95.591 0.00094165 26584000 15061.6 54491 43368 43947 82280 72547 56467 29734 87878 33460 TRUE FALSE 16214.72768 51785.05618 44813.86747 40356.38952 79049.27378 75307.82692 49052.81507 33620.33589 95521.46959 32368.20294 0.500946182 1.599874305 1.384502796 1.246791167 2.442189142 2.326598948 1.515463035 1.038684043 2.951089678 1 14.98228965 -4.691986501 0.991287494 1.823522739 6.91E-15 0.254822102 0.617923566 3.436102762 2.40449641 0.203281686 6.99635207 2.03E-05 4.691986501 -1.823522739 ASPSCSS(ph)PTR ddPTM_A459_MK2206_30min_R1 4 ASPSCSSPTR 10 0 Q8N5I9;A0A087WT30;J3KN91 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPSCS(0.023)S(0.962)PT(0.015)R;ASPSCS(0.002)S(0.991)PT(0.007)R;ASPSCS(0.002)S(0.915)PT(0.082)R;ASPSCS(0.001)S(0.993)PT(0.006)R 172.56 0.0001406 268693000 23949.1 22909.2 22041 18581.8 18905.7 17813.2 24958.2 20684.7 6292.67 15617.5 TRUE FALSE 21912.10328 21417.80692 20544.91833 20012.97346 18152.64594 18821.76799 23293.28402 20503.85585 6946.815565 17552.31381 1.248388305 1.220226983 1.170496298 1.140190044 1.03420245 1.072324036 1.327077688 1.168156864 0.395777767 1 14.0993736 -8.233773151 24.01740488 0.697888987 1.170256928 0.595668789 0.156443826 242.6259461 210627.4224 0.099545996 0.037601462 5.84E-09 8.233773151 0.472367941 ASPSCSS(ph)PTR ddPTM_A459_MK2206_30min_R2 3 ASPSCSSPTR 10 0 Q8N5I9;A0A087WT30;J3KN91 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPS(0.001)CS(0.03)S(0.951)PT(0.019)R;ASPSCS(0.078)S(0.829)PT(0.093)R;ASPS(0.002)CS(0.155)S(0.796)PT(0.047)R 128.51 0.0031049 497182000 91909 106257 97069 109817 108293 108439 109973 95169 96617 101746 TRUE FALSE 98945.62371 100980.4319 100305.232 100844.5998 104040.8727 112565.7221 95533.413 107607.9151 105020.572 98426.03635 1.005278962 1.025952437 1.019092465 1.024572395 1.057046251 1.143657982 0.970611197 1.093287092 1.066999911 1 16.58675238 -6.24039595 4.853979272 1.0602517 1.018767544 0.133641643 0.044728652 0.367784009 24.35002086 0.013255776 0.016599602 5.75E-07 6.24039595 -0.041484156 ASPSCSS(ph)PTRDSSGVPVSK ddPTM_A459_MK2206_30min_R1 1 ASPSCSSPTRDSSGVPVSK 19 1 Q8N5I9;A0A087WT30;J3KN91 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPSCS(0.047)S(0.8)PT(0.043)RDS(0.101)S(0.009)GVPVSK 201.22 8.01E-15 20325000 2229.8 2275.1 2963.6 3371.6 4741.3 2449.7 2254.3 3841.6 1017.5 466.91 TRUE FALSE 2040.143801 2126.990576 2762.439089 3631.281216 4552.443981 2588.399897 2103.91976 3808.013296 1123.272766 524.7543358 3.887807421 4.053307293 5.264252052 6.919964198 8.675381356 4.932593636 4.009342309 7.256754326 2.140568814 1 9.035498372 -8.412468323 4.964333945 1.046662033 5.618615712 0.543751428 1.49987466 0.170330224 5.843605089 1.555095485 0.40519008 3.87E-09 8.412468323 4.571953679 ASPSCSSPT(ph)RDSSGVPVSK ddPTM_A459_MK2206_30min_R2 1 ASPSCSSPTRDSSGVPVSK 19 1 Q8N5I9;A0A087WT30;J3KN91 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPS(0.044)CS(0.036)S(0.036)PT(0.826)RDS(0.046)S(0.013)GVPVSK 106.28 0.0011474 23278000 8518.3 28253 22965 25067 49774 39336 26496 11197 53140 21248 TRUE FALSE 9170.467597 26849.9971 23730.64164 23018.94591 47819.62267 40832.95904 23017.04337 12660.48635 57762.02114 20554.6795 0.446149871 1.306271747 1.154512851 1.11988834 2.326459173 1.986552943 1.11979578 0.615941803 2.810164038 1 14.32717926 -6.029824541 24.35756743 1.624790035 1.02512272 0.19170797 0.642065121 933.7019391 762549.0204 0.190337077 0.246161836 9.34E-07 6.029824541 -0.599667315 ASPSCSSPTRDS(ph)SGVPVSK ddPTM_A459_MK2206_30min_R1 1 ASPSCSSPTRDSSGVPVSK 19 1 Q8N5I9;A0A087WT30;J3KN91 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPS(0.009)CS(0.112)S(0.112)PT(0.202)RDS(0.399)S(0.153)GVPVS(0.015)K 70.117 0.0090683 5373700 1154.2 1129.2 1324 1627.5 1788.7 1208.3 1058.3 2132.7 704 498.24 TRUE FALSE 1056.029229 1055.688875 1234.130569 1752.850332 1717.452291 1276.712902 987.702738 2114.054029 777.1833193 559.9657327 1.885881881 1.885274068 2.20393945 3.130281425 3.06706677 2.279983983 1.763862823 3.775327498 1.387912284 1 9.129194733 -5.522607006 24.99895761 2.478221771 1.925335046 0.029982153 0.798817015 23.99950195 2207852.168 0.205878589 0.361713779 3.00E-06 5.522607006 -0.552886725 ASPSENNAGGGS(ph)PSSGSGGNPTNTSGTTR ddPTM_A459_MK2206_30min_R1 1 ASPSENNAGGGSPSSGSGGNPTNTSGTTR 29 0 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 ASPSENNAGGGS(0.999)PS(0.001)SGSGGNPTNTSGTTR 140.49 1.90E-15 0 0 57.392 0 0 156.9 71.236 127.84 0 0 0 TRUE FALSE 0 53.65577037 0 0 150.6503408 75.26932076 119.3120269 0 0 0 0 ASPSPQPS(ph)SQPLQIHR ddPTM_A459_MK2206_30min_R1 1 ASPSPQPSSQPLQIHR 16 0 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 AS(0.003)PS(0.001)PQPS(0.498)S(0.498)QPLQIHR 180.56 1.01E-06 23792000 331.99 333.86 128.99 203.6 324.1 187.97 352.49 170.01 146.12 230.01 TRUE FALSE 303.7525072 312.1256533 120.2345182 219.2813073 311.1904107 198.612699 328.9760353 168.5236205 161.3096969 258.5053753 1.175033621 1.207424228 0.46511419 0.848265948 1.203806344 0.768311679 1.272608103 0.651915343 0.624009063 1 8.01405047 -7.8138861 24.99999793 0.728471161 0.973641683 0.144547553 0.25388014 196.2689425 93553.48884 0.140111065 0.067307274 1.54E-08 7.8138861 0.245170522 ASPT(ph)PLASPGK ddPTM_A459_MK2206_30min_R1 1 ASPTPLASPGK 11 0 A0A1B0GTL5 A0A1B0GTL5 1 AS(0.001)PT(0.715)PLAS(0.284)PGK 130.1 0.0057506 12270000 4131.2 4279.7 4287.1 3384.2 2952.9 2516.4 3098.4 3060 3356.7 2914.7 TRUE FALSE 3779.819746 4001.090752 3996.103597 3644.85167 2835.27974 2658.876393 2891.711389 3033.246743 3705.640977 3275.795041 1.153863321 1.22141059 1.219888164 1.112661697 0.865524157 0.811673612 0.882751013 0.925957426 1.131218813 1 11.67762938 -6.09074047 3.987963007 0.924469389 1.197479586 0.671270439 0.083712834 0.139588442 4.020496065 0.026816793 0.036110475 8.11E-07 6.09074047 0.273010197 ASPT(ph)STEEEQVMLR ddPTM_A459_MK2206_30min_R1 1 ASPTSTEEEQVMLR 14 0 Q96PE3-3;Q96PE3;Q96PE3-2;Q96PE3-4 Q96PE3-3 INPP4A "Type I inositol 3,4-bisphosphate 4-phosphatase" 1 AS(0.311)PT(0.674)S(0.013)T(0.002)EEEQVMLR 130.66 0.0022294 6221400 564.87 706.85 736.29 676.1 532.79 558.73 776.84 896.64 654.75 472.91 TRUE FALSE 516.8248402 660.8339365 686.3126862 728.1733391 511.5678461 590.3648098 725.018421 888.800771 722.8136055 531.4976611 0.972393442 1.243343075 1.291280727 1.370040533 0.962502535 1.110757117 1.364104631 1.672257163 1.359956324 1 9.053919533 -7.352399989 5.627749576 1.409865191 1.169482208 0.15918625 0.196414714 0.339844718 16.65171657 0.083254445 0.055534621 4.44E-08 7.352399989 -0.240382984 ASPTGTPSRASPT(ph)GTPSR ddPTM_A459_MK2206_30min_R2 2 ASPTGTPSRASPTGTPSR 18 1 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 ASPTGTPSRAS(0.014)PT(0.982)GT(0.003)PSR;ASPTGTPS(0.004)RAS(0.121)PT(0.869)GT(0.006)PSR 167.95 1.26E-06 1139900 2999.6 4060.7 1924.59 4936.5 5042.3 7963.4 4858.7 5244.1 3380.8 2864.4 TRUE FALSE 3229.251682 3859.051543 1988.75487 4533.172159 4844.313966 8266.452767 4220.746854 5929.521876 3674.855873 2770.934863 1.165401513 1.392689375 0.71771982 1.635972112 1.748259778 2.983272136 1.523221246 2.139899409 1.326215178 1 11.43615708 -5.950856372 5.701377183 1.874907648 1.122001324 0.250907576 0.524027849 0.240272705 17.68771826 0.146236 0.217477282 1.12E-06 5.950856372 -0.752906324 ASPTPLAS(ph)PGK ddPTM_A459_MK2206_30min_R1 1 ASPTPLASPGK 11 0 A0A1B0GTL5 A0A1B0GTL5 1 ASPT(0.019)PLAS(0.981)PGK 133.98 0.0017177 9393700 4719 5024.3 5005.7 4102.1 3501.6 2819.6 3081.2 3129.4 3746.8 2990.8 TRUE FALSE 4317.62427 4697.217157 4665.927031 4418.044453 3362.123857 2979.243315 2875.65877 3102.039986 4136.293268 3361.322883 1.284501495 1.397431107 1.388122234 1.314376692 1.000238291 0.886330596 0.855513995 0.922862841 1.230555175 1 11.71481342 -6.253323345 3.872251587 0.963895375 1.359191989 0.760644175 0.099958852 0.107183499 3.701824316 0.032259076 0.040008805 5.58E-07 6.253323345 0.395296613 ASPTPLAS(ph)PGK ddPTM_A459_MK2206_30min_R2 3 ASPTPLASPGK 11 0 A0A1B0GTL5 A0A1B0GTL5 1 ASPTPLAS(1)PGK;ASPTPLAS(1)PGK;AS(0.014)PT(0.064)PLAS(0.922)PGK 143.55 0.00083027 40899000 263814 279921 245021 245638 231196 178192 244214 188454 192010 232841 TRUE FALSE 284011.8027 266020.5302 253189.8778 225568.5896 222118.0834 184973.2214 212148.4084 213085.5849 208710.6827 225243.4172 1.260910557 1.181035759 1.124072263 1.001443649 0.986124638 0.821214772 0.941862857 0.946023584 0.926600587 1 17.78112542 -5.61604477 1.208415786 0.925435237 1.253276202 0.865253726 0.045921269 0.184797932 0.500879583 0.015895716 0.052519089 2.42E-06 5.61604477 0.327840965 ASPVPSDPEKPGT(ph)PGEGMLSSDLDR ddPTM_A459_MK2206_30min_R1 1 ASPVPSDPEKPGTPGEGMLSSDLDR 25 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ASPVPSDPEKPGT(0.981)PGEGMLS(0.009)S(0.009)DLDR 76.804 0.00038128 4223000 1721.3 1643.4 1544.2 1330.8 1580.7 1314.5 1556.9 1242.3 1446.7 1181 TRUE FALSE 1574.894396 1536.414361 1439.384006 1433.298447 1517.737372 1388.925854 1453.042042 1231.438702 1597.089642 1327.311196 1.186529881 1.157538915 1.084435971 1.079851094 1.143467618 1.046420657 1.094725974 0.927769393 1.203251842 1 10.37429094 -1.522878745 0.280458209 1.039117419 2.164526308 0.267877544 0.069502617 67.45858678 0.951187753 0.072852808 37.22252683 0.03 1.522878745 1.12540889 ASPVT(ph)TSPTAATTQNPVLSK ddPTM_A459_MK2206_30min_R2 1 ASPVTTSPTAATTQNPVLSK 20 0 Q96JN0-3;Q96JN0-2;Q96JN0 Q96JN0-3;Q96JN0-2 LCOR Ligand-dependent corepressor 1 AS(0.007)PVT(0.314)T(0.048)S(0.187)PT(0.234)AAT(0.092)T(0.118)QNPVLSK 70.529 0.025363 5619400 19904 29891 23039 23891 26322 27305 27883 24960 22870 24355 TRUE FALSE 21427.86554 28406.65641 23807.10876 21939.02888 25288.46602 28344.11091 24221.92861 28222.3577 24859.19126 23560.29834 0.909490416 1.205700199 1.010475691 0.931186378 1.07335084 1.2030455 1.028082423 1.197877773 1.05513058 1 14.52407019 -6.517188036 24.97921116 1.108598075 1.024454444 0.132578294 0.096429951 498.9875985 2190303.446 0.030311687 0.03124236 3.04E-07 6.517188036 -0.084143631 ASPVTSPAAAFPT(ph)ASPANK ddPTM_A459_MK2206_30min_R2 3 ASPVTSPAAAFPTASPANK 19 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;H0YHQ7 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 ASPVTS(0.004)PAAAFPT(0.977)AS(0.018)PANK;ASPVT(0.002)S(0.101)PAAAFPT(0.872)AS(0.024)PANK;ASPVT(0.001)S(0.008)PAAAFPT(0.829)AS(0.163)PANK 248.91 3.10E-37 14220100 92428 77702 73455 76359 68538 65996 98903 79724 59266 99278 TRUE FALSE 99504.35875 73843.43167 75903.95304 70120.22544 65846.85374 68507.52403 85916.9173 90144.20053 64420.84955 96038.56699 1.0360875 0.768893518 0.790348663 0.730125695 0.685629282 0.713333468 0.894608489 0.938625006 0.670781037 1 16.55132626 -9.583509924 9.53289644 1 0.800201829 0.214878431 0.11275031 0 0 0.110797542 0.026872351 2.61E-10 9.583509924 -0.199798171 ASPVTSPAAAFPTAS(ph)PANK ddPTM_A459_MK2206_30min_R2 1 ASPVTSPAAAFPTASPANK 19 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;H0YHQ7 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 ASPVTSPAAAFPT(0.003)AS(0.997)PANK 178.1 7.06E-13 7865200 48793 42716 36147 39425 33790 24228 44951 35595 21574 49256 TRUE FALSE 52528.6296 40594.78555 37352.12294 36203.85139 32463.23482 25150.01352 39048.8797 40247.38872 23450.46752 47648.78075 1.102412879 0.851958537 0.783905115 0.759806459 0.681302529 0.527820715 0.819514772 0.844667756 0.49215252 1 15.54015168 -4.300396219 1.078547997 0.718981817 1.76675452 0.384813268 0.140193215 4.254405942 1.99979308 0.042190779 6.545656209 5.01E-05 4.300396219 1.047772704 ASPVTT(ph)SPTAATTQNPVLSK ddPTM_A459_MK2206_30min_R2 2 ASPVTTSPTAATTQNPVLSK 20 0 Q96JN0-3;Q96JN0-2;Q96JN0 Q96JN0-3;Q96JN0-2 LCOR Ligand-dependent corepressor 1 ASPVT(0.065)T(0.534)S(0.4)PTAATTQNPVLSK;ASPVTT(0.908)S(0.09)PT(0.001)AATTQNPVLSK 261.02 2.79E-47 18095700 60076 70608 63052 68749 66908 60848 70209 56618 55605 64704 TRUE FALSE 64675.46475 67101.70939 65154.12221 63131.98678 64280.85573 63163.61328 60990.47396 64018.167 60441.42239 62592.71378 1.033274655 1.072037069 1.040921831 1.008615588 1.026970263 1.009120862 0.974402135 1.022773469 0.965630322 1 15.93370711 -6.117119419 0.761984323 0.99153461 1.057294989 0.587230726 0.019109948 0.525866806 0.631779202 0.0101008 0.021387908 7.64E-07 6.117119419 0.065760379 ASPVTTS(ph)PTAATTQNPVLSK ddPTM_A459_MK2206_30min_R1 1 ASPVTTSPTAATTQNPVLSK 20 0 Q96JN0-3;Q96JN0-2;Q96JN0 Q96JN0-3;Q96JN0-2 LCOR Ligand-dependent corepressor 1 ASPVTT(0.028)S(0.966)PT(0.005)AATTQNPVLSK 214.34 2.21E-17 7887300 1161.4 1281.8 1065 924.6 1044.5 1206.3 1145.1 950.86 1101.9 1022.9 TRUE FALSE 1062.616831 1198.354587 992.7107673 995.8128522 1002.895353 1274.599664 1068.712468 942.5467313 1216.446448 1149.624575 0.924316385 1.042387762 0.863508653 0.866206999 0.872367706 1.108709479 0.92961867 0.819873507 1.058124952 1 10.16694709 ASPVTTS(ph)PTAATTQNPVLSK ddPTM_A459_MK2206_30min_R2 1 ASPVTTSPTAATTQNPVLSK 20 0 Q96JN0-3;Q96JN0-2;Q96JN0 Q96JN0-3;Q96JN0-2 LCOR Ligand-dependent corepressor 1 ASPVT(0.009)T(0.009)S(0.902)PT(0.08)AATTQNPVLSK 122.97 0.00024008 7732100 47631 57851 49806 54262 60180 61036 66533 50738 55850 60727 TRUE FALSE 51277.66598 54978.20346 51466.50718 49828.62102 57817.03082 63358.76775 57797.13718 57369.63081 60707.73205 58745.48296 0.872878448 0.935871163 0.876093013 0.848211956 0.984195344 1.078530034 0.983856703 0.976579439 1.033402553 1 15.8421903 -6.393194715 5.189963104 1.012978265 0.887146651 0.772385947 0.033791007 0.11338316 4.315882454 0.010950233 0.012417502 4.04E-07 6.393194715 -0.125831614 ASQEPS(ph)PKPGTEVIPAAPR ddPTM_A459_MK2206_30min_R1 4 ASQEPSPKPGTEVIPAAPR 19 1 I3L4I0;I3L1Y9;Q96CP2 I3L4I0 FLYWCH2 FLYWCH family member 2 1 ASQEPS(1)PKPGTEVIPAAPR;ASQEPS(0.997)PKPGT(0.003)EVIPAAPR;AS(0.043)QEPS(0.957)PKPGTEVIPAAPR;ASQEPS(1)PKPGTEVIPAAPR 217.67 2.05E-18 64568000 7765.3 9038.1 9259.9 8323.9 6507.6 5865.66 7258.4 7839.5 7743.8 6765.9 TRUE FALSE 7104.820458 8449.718047 8631.363788 8965.00822 6248.388512 6197.7686 6774.20538 7770.960078 8548.795721 7604.110772 0.934339421 1.111203966 1.135091801 1.178968651 0.821711927 0.815055012 0.890860954 1.021941988 1.124233454 1 12.89256383 -6.254395531 24.99587925 0.937463397 1.094650518 0.307850504 0.105452949 723.6033433 2567786.324 0.034250378 0.043257259 5.57E-07 6.254395531 0.157187121 ASQEPS(ph)PKPGTEVIPAAPR ddPTM_A459_MK2206_30min_R2 4 ASQEPSPKPGTEVIPAAPR 19 1 I3L4I0;I3L1Y9;Q96CP2 I3L4I0 FLYWCH2 FLYWCH family member 2 1 AS(0.002)QEPS(0.998)PKPGTEVIPAAPR;ASQEPS(0.996)PKPGT(0.003)EVIPAAPR;ASQEPS(1)PKPGTEVIPAAPR;AS(0.002)QEPS(0.821)PKPGT(0.177)EVIPAAPR 237.66 5.58E-29 58648000 145599 165281 166006 148730 170711 128726.1 192748 138505 126379 170669 TRUE FALSE 156746.1714 157073.3859 171540.5572 136578.2832 164008.0284 133624.8619 167439.9561 156608.0791 137371.217 165100.0845 0.949400916 0.951382832 1.039009506 0.827245387 0.99338549 0.809356714 1.014172443 0.9485645 0.832048132 1 17.33298133 -5.74253636 24.99991589 0.918324844 0.977076205 0.127438997 0.074351298 535.3014661 707949.9405 0.019141414 0.033086241 1.81E-06 5.74253636 0.058751362 ASQGLLSSIENS(ph)ESDSSEAKEEGSR ddPTM_A459_MK2206_30min_R2 1 ASQGLLSSIENSESDSSEAKEEGSR 25 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ASQGLLS(0.001)S(0.003)IENS(0.49)ES(0.49)DS(0.012)S(0.003)EAKEEGSR 80.722 0.00010353 7202900 12183 10746 8784.8 8833.4 11862 8951 13294 7845.8 8567.3 10219 TRUE FALSE 13115.73985 10212.36927 9077.680847 8111.682963 11396.23828 9291.636577 11548.48183 8871.272999 9312.468268 9885.554867 1.326758085 1.033059793 0.918277322 0.820559197 1.15281726 0.939920591 1.168217868 0.897397578 0.942027877 1 13.27110623 -4.772245773 3.850979652 0.981580011 1.363949051 0.50489594 0.102433547 0.210023903 5.617485703 0.025689558 0.230882835 1.69E-05 4.772245773 0.38236904 ASQGLLSSIENSES(ph)DSSEAKEEGSR ddPTM_A459_MK2206_30min_R1 2 ASQGLLSSIENSESDSSEAKEEGSR 25 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ASQGLLSSIENS(0.006)ES(0.821)DS(0.143)S(0.03)EAKEEGSR;ASQGLLSSIENS(0.483)ES(0.516)DS(0.001)SEAKEEGSR 142.34 7.31E-09 26989000 2645.37 2492.98 2470.79 2078.62 2048.51 1421.74 1831.05 2000.2 2078.7 1900.21 TRUE FALSE 2420.36739 2330.686549 2303.079659 2238.715673 1966.913509 1502.23769 1708.903995 1982.712462 2294.788304 2135.622361 1.133331171 1.091338334 1.078411474 1.048273194 0.921002489 0.703419161 0.800190159 0.92840031 1.074529067 1 11.06044084 -6.215388647 3.123458582 0.883664003 1.095124572 0.462698338 0.096833659 0.237853852 4.670341388 0.033061041 0.042595456 6.09E-07 6.215388647 0.211460569 ASQGS(ph)DLEQNEASR ddPTM_A459_MK2206_30min_R2 1 ASQGSDLEQNEASR 14 0 Q5HYY5;Q96T21-2;Q96T21-3;Q96T21 Q5HYY5 SECISBP2 Selenocysteine insertion sequence-binding protein 2 1 AS(0.001)QGS(0.997)DLEQNEAS(0.002)R 74.783 0.045639 3971400 9087.1 7265.1 10299 8432.4 8467.9 10159 11637 8751 9349.6 9590.6 TRUE FALSE 9782.815363 6904.325698 10642.36352 7743.445946 8135.407698 10545.60786 10109.04792 9894.785747 10162.81131 9277.659507 1.054448631 0.744188304 1.147095721 0.834633556 0.876881469 1.136666834 1.08961187 1.066517449 1.095406799 1 13.17954518 -6.760686875 24.9998926 1.082546142 0.927647806 0.30848719 0.109241607 23.62029426 784729.6985 0.035233074 0.033276072 1.74E-07 6.760686875 -0.154898336 ASQPDLVDT(ph)PTSSKPQPK ddPTM_A459_MK2206_30min_R1 1 ASQPDLVDTPTSSKPQPK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ASQPDLVDT(0.847)PT(0.127)S(0.019)S(0.006)KPQPK 79.013 0.017238 5099300 2975.6 3198.9 2695.7 2610.6 2348.3 2409.7 2221.6 2286.2 2272.9 1635.4 TRUE FALSE 2722.509595 2990.651029 2512.723395 2811.668864 2254.762238 2546.135132 2073.401118 2266.211994 2509.176089 1838.005699 1.481230225 1.627117386 1.367092276 1.529738926 1.226743878 1.385270532 1.128071104 1.232973323 1.365162301 1 10.84392552 -1.522878745 0.098577352 0.830597677 2.997455326 0.647765057 0.107203282 77.95249908 0.547846919 1.399314875 22.83343669 0.03 1.522878745 2.166857649 ASQPDLVDT(ph)PTSSKPQPK ddPTM_A459_MK2206_30min_R2 2 ASQPDLVDTPTSSKPQPK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ASQPDLVDT(0.985)PT(0.008)S(0.006)S(0.001)KPQPK;ASQPDLVDT(0.992)PT(0.006)S(0.001)SKPQPK 128.82 0.00091442 36072000 180247 152736 119776 178330 148645 120819 208839 151850 92395 138494 TRUE FALSE 194046.8489 145151.3523 123769.2721 163759.8686 142808.4504 125416.8517 181418.1884 171697.3164 100431.3501 133974.9521 1.448381551 1.083421565 0.923823969 1.222317052 1.065933954 0.936121639 1.354120196 1.281562812 0.749627811 1 17.03160377 -4.761490888 10.91431297 1.082276137 1.449291823 0.301152332 0.172448673 0.087490726 340.01104 0.042433093 0.238228316 1.73E-05 4.761490888 0.367015686 ASQSRPNS(ph)SALETLGGEK ddPTM_A459_MK2206_30min_R1 3 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 ASQS(0.001)RPNS(0.933)S(0.046)ALET(0.02)LGGEK;ASQSRPNS(0.902)S(0.098)ALETLGGEK;ASQS(0.001)RPNS(0.767)S(0.228)ALET(0.004)LGGEK 176.67 1.05E-08 19015000 3219.63 4194.69 4172.31 4110.27 3516.01 3792.92 4435.09 4419.76 3502.99 3106.99 TRUE FALSE 2945.783562 3921.614919 3889.105222 4426.843708 3375.959876 4007.671853 4139.233238 4381.118504 3867.138346 3491.907378 0.843603006 1.123058115 1.113748104 1.267743737 0.966795367 1.147702794 1.185378875 1.254649116 1.107457308 1 11.76979958 -4.758686366 4.88618953 1.13989895 0.822630082 0.468016984 0.091060039 0.158338082 9.508530114 0.022238171 0.174437388 1.74E-05 4.758686366 -0.317268868 ASQSRPNS(ph)SALETLGGEK ddPTM_A459_MK2206_30min_R2 1 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 ASQSRPNS(0.992)S(0.007)ALETLGGEK 118.84 0.0046915 7920700 35053 40333 36296 42904 42999 38533 48252 44719 40283 38586 TRUE FALSE 37736.68463 38330.12187 37506.09052 39398.60596 41310.64321 39999.40032 41916.45444 50563.92684 43786.74253 37326.94198 1.010977129 1.026875491 1.004799443 1.055500501 1.106724554 1.071595962 1.122954419 1.354622805 1.173059999 1 15.1879297 -7.405172064 3.432410806 1.203091407 1.046093351 0.295147819 0.086165389 0.249537238 5.421990828 0.038656609 0.024366509 3.93E-08 7.405172064 -0.156998056 ASQSRPNSS(ph)ALETLGGEK ddPTM_A459_MK2206_30min_R2 1 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 ASQSRPNS(0.339)S(0.644)ALET(0.016)LGGEK 151.22 0.00059355 10621000 30192 42994 40345 49109 52112 36833 45471 37004 33651 39447 TRUE FALSE 32503.52273 40858.98048 41690.08216 45096.63761 50065.82104 38234.70563 39500.60308 41840.54985 36577.90315 38159.84762 0.851772865 1.070732276 1.092511757 1.181782434 1.312002646 1.001961696 1.035135241 1.096454846 0.958544267 1 15.21976779 -8.006730946 1.291177351 0.984849035 1.094656877 0.087630823 0.113853259 1.156814393 3.478171562 0.109545282 0.037386567 9.85E-09 8.006730946 0.109807842 ASQTPVPPGAPS(ph)PDKDPAK ddPTM_A459_MK2206_30min_R2 1 ASQTPVPPGAPSPDKDPAK 19 1 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 ASQTPVPPGAPS(1)PDKDPAK 76.417 0.0047888 4107900 26147 23919 26436 21429 18348 12955 30942 20941 14768 27359 TRUE FALSE 28148.83442 22731.21724 27317.36305 19678.18215 17627.56533 13448.0116 26879.27823 23678.0606 16052.49395 26466.27807 1.063573592 0.858874723 1.032157335 0.743519058 0.666038696 0.50811873 1.015604769 0.894650186 0.606526309 1 14.6918677 -5.767791886 24.98485093 0.766157713 0.972269176 0.256775201 0.161493163 208.8575733 821454.4935 0.046203773 0.070458612 1.71E-06 5.767791886 0.206111463 ASRPGT(ph)PT(ph)S(ph)S(ph)AS(ph)TETPTSEQND ddPTM_A459_MK2206_30min_R1 1 ASRPGTPTSSASTETPTSEQND 22 1 K7ENU0 K7ENU0 PHF12 5 AS(0.334)RPGT(0.981)PT(0.962)S(0.954)S(0.735)AS(0.668)T(0.317)ET(0.023)PT(0.016)S(0.01)EQND 50.237 0.023153 7072400 727.5 462.06 477.1 437.01 665.23 508.01 574.12 453.23 423.55 611.74 TRUE FALSE 665.6223047 431.97981 444.7157813 470.6685859 638.7324805 536.7730872 535.8215023 449.2674579 467.5795382 687.5269696 0.968139919 0.628309621 0.646833944 0.684581997 0.929028982 0.780730227 0.779346158 0.653454305 0.680089013 1 9.425272497 -4.741094011 24.54244599 0.744409335 0.968140922 0.223924052 0.118718215 1792.840425 2162547.131 0.029497926 1.177600454 1.82E-05 4.741094011 0.223731587 ASS(ph)ASVPAVGASAEGTR ddPTM_A459_MK2206_30min_R1 2 ASSASVPAVGASAEGTR 17 0 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 "Pantothenate kinase 2, mitochondrial" 1 AS(0.009)S(0.629)AS(0.336)VPAVGAS(0.024)AEGT(0.002)R;AS(0.123)S(0.754)AS(0.123)VPAVGASAEGTR 238.83 1.70E-22 77017800 2706.1 2685.1 2800.8 2496.24 2788.7 3004.72 3637.6 2592.7 3367.8 2995.3 TRUE FALSE 2475.931985 2510.299502 2610.689499 2688.500837 2677.620174 3174.84465 3394.942341 2570.032297 3717.894862 3366.380377 0.735487885 0.745696927 0.775518274 0.798632518 0.795400363 0.943103361 1.008484473 0.76344085 1.104419122 1 11.71698248 -6.640199084 0.525990445 1.00022659 0.711353789 0.590820575 0.081107277 0.75633635 0.446802175 0.068450692 0.097739065 2.29E-07 6.640199084 -0.288872801 ASS(ph)ASVPAVGASAEGTR ddPTM_A459_MK2206_30min_R2 1 ASSASVPAVGASAEGTR 17 0 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 "Pantothenate kinase 2, mitochondrial" 1 AS(0.039)S(0.96)AS(0.001)VPAVGASAEGTR 144.4 0.00049389 75240000 100390 116450 103270 123810 136400 123710 121090 122850 120130 139030 TRUE FALSE 108075.9356 110667.2623 106712.9703 113694.327 131044.2506 128417.8707 105190.7375 138906.9168 130578.6903 134493.4625 0.803577613 0.82284492 0.793443549 0.84535207 0.974354056 0.954826118 0.782125284 1.032815382 0.970892472 1 17.03717652 -6.002149265 0.323164977 1.007161975 0.720915914 0.511411251 0.064309596 2.883804151 0.441026163 0.078705874 0.306326304 9.95E-07 6.002149265 -0.286246062 ASS(ph)ASVPAVGASAEGTRR ddPTM_A459_MK2206_30min_R1 1 ASSASVPAVGASAEGTRR 18 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 "Pantothenate kinase 2, mitochondrial" 1 ASS(0.993)AS(0.007)VPAVGASAEGTRR 224.67 9.35E-15 14015000 1567.9 1737.6 1673 1289.7 1621.2 1845.8 1544.7 2064.7 1596.7 1163.8 TRUE FALSE 1434.541872 1624.481924 1559.441421 1389.032917 1556.624171 1950.307601 1441.655881 2046.648546 1762.682679 1307.98033 1.096761043 1.241977335 1.192251432 1.061967742 1.190097538 1.49108328 1.102199971 1.564739544 1.347636993 1 10.35312513 -6.546086816 24.82329893 1.325838941 1.154072886 0.161413711 0.161861838 332.8665732 356030.6149 0.050516962 0.050519677 2.84E-07 6.546086816 -0.171766055 ASS(ph)CETYEYPQR ddPTM_A459_MK2206_30min_R1 2 ASSCETYEYPQR 12 0 Q9UQC2;Q9UQC2-2 Q9UQC2 GAB2 GRB2-associated-binding protein 2 1 AS(0.123)S(0.877)CETYEYPQR;AS(0.28)S(0.673)CET(0.047)YEYPQR 190.78 0.00013848 9108000 3132.9 2849.1 3237 2956.9 2771.9 2253 2815.3 2267.96 1966.64 2053.93 TRUE FALSE 2866.430403 2663.623072 3017.281459 3184.64095 2661.489353 2380.562913 2627.496474 2248.131465 2171.079266 2308.386355 1.241746382 1.153889628 1.307095518 1.37959616 1.152965295 1.031267105 1.138239476 0.973897398 0.940518151 1 11.17266899 -6.597006918 3.334822607 1.021960128 1.265765881 0.733044464 0.072001361 0.14278721 3.200093186 0.027029156 0.02743279 2.53E-07 6.597006918 0.243805754 ASS(ph)CETYEYPQR ddPTM_A459_MK2206_30min_R2 2 ASSCETYEYPQR 12 0 Q9UQC2;Q9UQC2-2 Q9UQC2 GAB2 GRB2-associated-binding protein 2 1 AS(0.003)S(0.992)CET(0.004)YEYPQR;AS(0.029)S(0.773)CET(0.198)YEYPQR 173.76 3.16E-08 6007900 26929.3 31467 31208 34599 29495 22808 29166 21889 22305.1 27384.4 TRUE FALSE 28991.02791 29904.39454 32248.45914 31772.15102 28336.8781 23675.97442 25336.46917 24749.96746 24245.15728 26490.84927 1.094378954 1.128857525 1.217343348 1.199363248 1.069685528 0.893741615 0.956423439 0.934283654 0.915227633 1 14.69320648 -6.565516896 4.009343609 0.937676722 1.160302113 0.862279441 0.041539689 0.077220797 2.669448387 0.014683413 0.015060454 2.72E-07 6.565516896 0.22262539 ASS(ph)DGEGTMSR ddPTM_A459_MK2206_30min_R2 1 ASSDGEGTMSR 11 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 AS(0.002)S(0.998)DGEGTMSR 142.89 0.00088397 9503200 56771 51852 49950 59970 40278 52311 61875 45603 43599 55649 TRUE FALSE 61117.43141 49277.10508 51615.30807 55070.25917 38696.48334 54301.73176 53750.73817 51563.46868 47391.16221 53833.17769 1.135311606 0.915366828 0.958801064 1.022979908 0.718822202 1.008703816 0.998468611 0.957838101 0.880333732 1 15.71620797 -4.757202791 24.85998224 0.939048634 1.135311917 0.321290189 0.085084232 142.9649195 838788.7233 0.020872574 0.157899776 1.75E-05 4.757202791 0.196263283 ASS(ph)DGEGTMSRPAS(ph)VDGSPVSPSTNR ddPTM_A459_MK2206_30min_R2 1 ASSDGEGTMSRPASVDGSPVSPSTNR 26 1 P35568 P35568 IRS1 Insulin receptor substrate 1 2 AS(0.426)S(0.481)DGEGT(0.043)MS(0.052)RPAS(0.472)VDGS(0.138)PVS(0.308)PS(0.064)T(0.016)NR 59.226 0.013563 22830000 43246 63977 49146 52125 49293 51540 54059 54030 51622 55498 TRUE FALSE 46556.94701 60799.99521 50784.50311 47866.22076 47357.50914 53501.39082 46960.98836 61091.90651 56111.98825 53687.10481 0.867190495 1.132487875 0.945934844 0.891577613 0.882102123 0.996540808 0.87471635 1.137925145 1.045166962 1 15.71228799 -7.762282224 24.99998379 1.068659534 0.94693437 0.310420787 0.081115852 27.52089941 816213.8375 0.041381333 0.021694919 1.73E-08 7.762282224 -0.121725164 ASS(ph)DGEGTMSRPASVDGSPVS(ph)PSTNR ddPTM_A459_MK2206_30min_R2 1 ASSDGEGTMSRPASVDGSPVSPSTNR 26 1 P35568 P35568 IRS1 Insulin receptor substrate 1 2 AS(0.331)S(0.619)DGEGT(0.034)MS(0.016)RPAS(0.019)VDGS(0.219)PVS(0.507)PS(0.135)T(0.119)NR 59.942 0.012082 23243000 45595 49220 44034 52018 47105 48261 52175 40447 40826 50156 TRUE FALSE 49085.78826 46775.80637 45502.07158 47767.963 45255.42102 50097.60617 45324.35983 45733.56178 44376.97168 48519.41383 1.011673151 0.964063716 0.937811651 0.984512368 0.932728107 1.032527028 0.934148957 0.942582735 0.914622997 1 15.5662745 ASS(ph)DGEGTMSRPASVDGSPVSPSTNR ddPTM_A459_MK2206_30min_R2 2 ASSDGEGTMSRPASVDGSPVSPSTNR 26 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 AS(0.083)S(0.906)DGEGT(0.01)MS(0.001)RPASVDGSPVSPSTNR;AS(0.194)S(0.705)DGEGT(0.045)MS(0.045)RPAS(0.006)VDGS(0.004)PVSPSTNR 70.15 0.00047426 38961000 9427.4 10796.1 10084.3 15720.9 9441.8 19626 7001.9 5869.4 8845.1 9412.7 TRUE FALSE 10149.16899 10259.98137 10420.50553 14436.45218 9071.067491 20372.88118 6082.542119 6636.550733 9614.43081 9105.56437 1.114611745 1.126781488 1.144410726 1.58545386 0.996211451 2.237410045 0.668002759 0.728845623 1.055885217 1 13.15253272 ASS(ph)EDTLNKPGSTAASGVVR ddPTM_A459_MK2206_30min_R1 3 ASSEDTLNKPGSTAASGVVR 20 1 Q5M775;Q5M775-2;J3KRD8;J3KRB9;J3KTI9;J3QRQ9;J3QS22 Q5M775 SPECC1 Cytospin-B 1 AS(0.034)S(0.941)EDT(0.024)LNKPGS(0.001)TAASGVVR;AS(0.033)S(0.906)EDT(0.055)LNKPGS(0.003)T(0.003)AASGVVR;AS(0.046)S(0.953)EDT(0.001)LNKPGSTAASGVVR 116.45 0.00014674 36140000 8065.9 6114.5 6025.4 6352.9 6674.4 6786.7 6896.5 5601.7 6920.2 5578.2 TRUE FALSE 7379.852849 5716.444939 5616.412636 6842.201459 6408.544515 7170.957089 6436.447068 5552.724927 7639.579554 6269.269529 1.177147164 0.911819936 0.895863961 1.09138735 1.022215505 1.143826574 1.026666191 0.885705249 1.218575708 1 12.61408164 -5.798234852 24.99747491 1.051814286 0.986630725 0.058156442 0.109434423 477.1816901 324177.4911 0.030282127 0.04491702 1.59E-06 5.798234852 -0.065183561 ASS(ph)EDTLNKPGSTAASGVVR ddPTM_A459_MK2206_30min_R2 4 ASSEDTLNKPGSTAASGVVR 20 1 Q5M775;Q5M775-2;J3KRD8;J3KRB9;J3KTI9;J3QRQ9;J3QS22 Q5M775 SPECC1 Cytospin-B 1 AS(0.049)S(0.534)EDT(0.38)LNKPGS(0.005)T(0.016)AAS(0.017)GVVR;AS(0.125)S(0.87)EDT(0.005)LNKPGSTAASGVVR;AS(0.243)S(0.756)EDT(0.001)LNKPGSTAASGVVR;AS(0.193)S(0.804)EDT(0.003)LNKPGSTAASGVVR 138.46 0.00040281 112001200 115440 132832 103097.2 111735 101005 103576 113741.4 102602 100854 96109 TRUE FALSE 124278.1752 126235.756 106534.4092 102605.8931 97039.03619 107517.6573 98807.01755 116012.4337 109626.0986 92972.9712 1.336712956 1.357768332 1.145864307 1.103609918 1.043733839 1.15643994 1.062749918 1.247808177 1.179117944 1 16.50452374 -5.295061317 4.868055299 1.121178008 1.349222893 0.65040378 0.067484481 0.111570746 6.880516385 0.017997214 0.041440506 5.07E-06 5.295061317 0.228044885 ASS(ph)ESQGLGAGVR ddPTM_A459_MK2206_30min_R1 3 ASSESQGLGAGVR 13 0 Q9BV36-2;H7C2D8;Q9BV36-3 Q9BV36-2 MLPH Melanophilin 1 AS(0.08)S(0.92)ESQGLGAGVR;AS(0.159)S(0.832)ES(0.009)QGLGAGVR;AS(0.005)S(0.917)ES(0.078)QGLGAGVR 214.48 1.88E-06 58814000 5487.6 5980.1 5551.2 4530.9 5916.5 6343.5 7101.4 6587.7 5420.6 5467.4 TRUE FALSE 5020.850803 5590.794403 5174.400011 4879.870703 5680.833277 6702.663488 6627.678563 6530.104433 5984.090768 6144.742789 0.817096985 0.909850029 0.842085696 0.794153778 0.924503022 1.090796429 1.078593326 1.06271404 0.973855371 1 12.58513691 -6.574016964 4.425110845 1.046461552 0.846574469 0.827377115 0.043175505 0.083111867 3.464907578 0.014862766 0.015105548 2.67E-07 6.574016964 -0.199887082 ASS(ph)ESQGLGAGVR ddPTM_A459_MK2206_30min_R2 4 ASSESQGLGAGVR 13 0 Q9BV36-2;H7C2D8;Q9BV36-3 Q9BV36-2 MLPH Melanophilin 1 AS(0.002)S(0.949)ES(0.049)QGLGAGVR;AS(0.186)S(0.809)ES(0.005)QGLGAGVR;AS(0.058)S(0.934)ES(0.008)QGLGAGVR;AS(0.064)S(0.926)ES(0.01)QGLGAGVR 192.4 0.00017878 89626000 137152 192046 163119 189820 140852 181456 146215 118260 167974 143107 TRUE FALSE 147652.4626 182509.2749 168557.306 174311.0988 135321.4428 188361.4352 127016.7949 133716.988 182584.0749 138437.4303 1.066564601 1.318352085 1.217570318 1.259132724 0.977491726 1.360625048 0.917503269 0.96590198 1.318892401 1 17.07887454 -6.727971585 1.105252052 1.069827658 1.214564012 0.104836084 0.153702859 1.05703895 2.750551734 0.079417012 0.074172387 1.87E-07 6.727971585 0.144736354 ASS(ph)ESQIFELNK ddPTM_A459_MK2206_30min_R1 4 ASSESQIFELNK 12 0 Q9BV36;Q9BV36-4;H7C371 Q9BV36 MLPH Melanophilin 1 AS(0.002)S(0.998)ESQIFELNK;ASS(1)ESQIFELNK;ASS(0.993)ES(0.007)QIFELNK;ASS(0.92)ES(0.08)QIFELNK 321.78 9.98E-99 256039000 20073 19762.8 21384.6 18048.9 19228.4 16670.9 21338.3 23190.9 19589 19127.2 TRUE FALSE 18365.68594 18476.23813 19933.07293 19439.02941 18462.49211 17614.79195 19914.86094 22988.14441 21625.34665 21496.82194 0.854344237 0.85948696 0.927256735 0.90427457 0.858847515 0.819413772 0.926409541 1.06937409 1.005978777 1 14.39183577 -7.588644143 4.949507644 1.026603266 0.873452311 0.816925558 0.032645056 0.085911643 4.100115014 0.01674675 0.009475489 2.58E-08 7.588644143 -0.153150955 ASS(ph)ESQIFELNK ddPTM_A459_MK2206_30min_R2 6 ASSESQIFELNK 12 0 Q9BV36;Q9BV36-4;H7C371 Q9BV36 MLPH Melanophilin 1 AS(0.008)S(0.992)ESQIFELNK;AS(0.002)S(0.995)ES(0.003)QIFELNK;AS(0.004)S(0.996)ESQIFELNK;AS(0.003)S(0.997)ESQIFELNK;AS(0.002)S(0.998)ES(0.001)QIFELNK;AS(0.004)S(0.996)ESQIFELNK 284.91 1.37E-44 154838800 425126 502915 467501 463537 418265 387449 504682 391799 464865 459649 TRUE FALSE 457673.9734 477940.9724 483087.25 425664.5443 401841.8145 402193.6432 438416.6472 443008.4745 505298.1174 444650.6908 1.029288794 1.074868391 1.086442144 0.957300985 0.903724705 0.904515953 0.985979908 0.996306727 1.136393416 1 18.7623129 -5.762339855 24.99977732 0.976799678 1.064666647 0.250964332 0.062648347 33.08023859 918447.6656 0.018785992 0.029805129 1.73E-06 5.762339855 0.087866969 ASS(ph)FADMMGILK ddPTM_A459_MK2206_30min_R1 2 ASSFADMMGILK 12 0 E9PLD2;Q9H019-3;Q9H019;E9PPF9 E9PLD2 MTFR1L Mitochondrial fission regulator 1-like 1 ASS(1)FADMMGILK;AS(0.004)S(0.996)FADMMGILK 273.15 5.12E-34 14405200 6090.1 5977.9 6310.6 5071.4 6686.3 5346.2 6385.2 5858.3 5231.5 5058.1 TRUE FALSE 5572.105015 5588.737623 5882.254054 5462.000107 6419.970513 5648.897224 5959.254958 5807.081501 5775.333146 5684.735615 0.980187188 0.983113024 1.034745405 0.960818669 1.129334933 0.99369568 1.048290609 1.021521825 1.015936982 1 12.47287754 ASS(ph)FADMMGILK ddPTM_A459_MK2206_30min_R2 2 ASSFADMMGILK 12 0 E9PLD2;Q9H019-3;Q9H019;E9PPF9 E9PLD2 MTFR1L Mitochondrial fission regulator 1-like 1 AS(0.006)S(0.994)FADMMGILK;AS(0.049)S(0.951)FADMMGILK 238.13 3.32E-13 133204000 744010 841760 877990 945680 898950 826230 949820 685060 745820 832380 TRUE FALSE 800971.9776 799959.4224 907261.7484 868414.9189 863652.7061 857672.7616 825107.4931 774599.6942 810690.0755 805219.5088 0.994725002 0.993467513 1.12672599 1.078482214 1.072568035 1.065141557 1.024698836 0.961973332 1.006793882 1 19.6190226 -7.520314439 4.478600441 0.988346144 1.056955884 0.368555908 0.038411529 0.224289 11.50129337 0.019663795 0.011750783 3.02E-08 7.520314439 0.06860974 ASS(ph)FSGISILTR ddPTM_A459_MK2206_30min_R2 3 ASSFSGISILTR 12 0 A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5;H0YIX9;H7C0E9;Q9Y2K5-2;Q9Y2K5-3 A0A0U1RRA6;Q9Y2K5-3 R3HDM2 R3H domain-containing protein 2 1 AS(0.007)S(0.951)FS(0.042)GISILTR;AS(0.006)S(0.951)FS(0.041)GIS(0.001)ILTR;AS(0.003)S(0.943)FS(0.053)GIS(0.001)ILTR 196.02 0.00011909 42510000 133305.4 183102 147988 157728 123288.5 153718 168627 141397.8 129509.6 117097.1 TRUE FALSE 143511.3639 174009.4209 152921.8461 144841.1179 118447.574 159567.8462 146486.0723 159878.978 140774.1109 113276.2312 1.266915066 1.536151221 1.349990589 1.278654103 1.045652497 1.408661327 1.293175724 1.411407991 1.242750658 1 16.78948565 -13.05097439 0.314920392 2.91E-17 1.334628085 0.378896158 0.121907734 124.9700462 2.670546289 81.88249298 0.118220687 8.89E-14 13.05097439 1.334628085 ASS(ph)FSGISVLTR ddPTM_A459_MK2206_30min_R2 3 ASSFSGISVLTR 12 0 Q15032-2;Q15032-4;Q15032;Q15032-3;H7C207;H7C1X4;H7BZ47 Q15032-2 R3HDM1 R3H domain-containing protein 1 1 AS(0.022)S(0.973)FS(0.002)GIS(0.003)VLTR;AS(0.002)S(0.981)FS(0.015)GIS(0.003)VLTR;AS(0.004)S(0.995)FSGIS(0.001)VLTR 179.6 0.00010389 37361400 105236 131559 125404 119188 112550 126237 128224 106395 107890 95976 TRUE FALSE 113292.9491 125025.9714 129584.9068 109449.9591 108130.7215 131041.0375 111388.0348 120301.1918 117274.0772 92844.31098 1.220246538 1.346619626 1.395722639 1.178854773 1.164645635 1.411406214 1.199729241 1.295730353 1.263126151 1 16.50252589 -12.94819896 0.384029497 4.26E-13 1.28433759 0.497885734 0.082966218 139.3512266 3.340126467 112.5658969 0.056069872 1.13E-13 12.94819896 1.28433759 ASS(ph)HS(ph)SQTQGGGSVTK ddPTM_A459_MK2206_30min_R1 3 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 AS(0.042)S(0.955)HS(0.684)S(0.319)QTQGGGSVTK;AS(0.085)S(0.915)HS(0.907)S(0.084)QT(0.009)QGGGSVTK;AS(0.115)S(0.879)HS(0.702)S(0.248)QT(0.055)QGGGSVTK 145.94 0.0072464 8700400 4793.86 4159.8 4236.4 3525.86 4941.19 4550.97 4843.67 4417.26 2878.78 3786.87 TRUE FALSE 4386.117033 3888.996264 3948.844971 3797.422348 4744.371939 4808.641989 4520.557612 4378.640362 3178.039483 4256.016045 1.030568726 0.913764474 0.927826618 0.892248128 1.114744843 1.129845832 1.062157089 1.028811996 0.746716988 1 12.05528787 -3.762100356 17.20473754 0.989151694 40.77594868 0 0.110414287 0 0 0.026422687 0 0.000172942 3.762100356 39.78679699 ASS(ph)HS(ph)SQTQGGGSVTK ddPTM_A459_MK2206_30min_R2 3 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 AS(0.002)S(0.998)HS(0.822)S(0.178)QTQGGGSVTK;AS(0.142)S(0.858)HS(0.801)S(0.198)QTQGGGSVTK;AS(0.006)S(0.994)HS(0.943)S(0.052)QT(0.005)QGGGSVTK 227.63 7.55E-14 121880900 223417 357332 267526 380247 339316 343899 376833 299209 341157 345677 TRUE FALSE 240521.9773 339587.4125 276445.1833 349179.6038 325992.7489 356986.3174 327354.3744 338316.6436 370830.2192 334397.5878 0.719269475 1.015519923 0.826696105 1.044204912 0.974865731 1.067550516 0.978937607 1.011719749 1.108950042 1 18.35120491 -3.715976254 0.612870057 1.029537471 4.58E-17 0.563966539 0.0730312 8.659258178 0.915974767 0.031405925 8.439558262 0.00019232 3.715976254 -1.029537471 ASS(ph)HSS(ph)QTQGGGSVTK ddPTM_A459_MK2206_30min_R1 5 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 AS(0.017)S(0.955)HS(0.069)S(0.871)QT(0.088)QGGGSVTK;AS(0.006)S(0.909)HS(0.087)S(0.997)QT(0.001)QGGGSVTK;AS(0.002)S(0.998)HS(0.026)S(0.592)QT(0.383)QGGGSVTK;AS(0.014)S(0.986)HS(0.078)S(0.919)QT(0.003)QGGGSVTK;AS(0.044)S(0.955)HS(0.029)S(0.954)QT(0.017)QGGGSVTK 188.9 1.70E-05 103407700 26430.78 22711.63 23199.22 17893.34 27858.27 25150.77 27749.43 27525.72 16280.56 20792.63 TRUE FALSE 24182.70337 21233.09876 21624.52158 19271.48815 26748.61612 26574.78486 25898.31616 27285.06553 17972.98247 23368.57798 1.034838465 0.908617494 0.925367457 0.824675261 1.1446403 1.137201625 1.108253835 1.167596315 0.76910895 1 14.51228233 -6.266873259 24.97962822 1.069672741 0.922462927 0.223026176 0.117831037 616.1406344 2832402.519 0.035943383 0.041934603 5.41E-07 6.266873259 -0.147209814 ASS(ph)HSS(ph)QTQGGGSVTK ddPTM_A459_MK2206_30min_R2 2 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 AS(0.008)S(0.992)HS(0.144)S(0.855)QT(0.002)QGGGSVTK;AS(0.035)S(0.965)HS(0.197)S(0.788)QT(0.015)QGGGSVTK 176.19 2.22E-05 103324000 181725 314107 209188 316966 256189 268119 288864 233303 264125 265411 TRUE FALSE 195638.0057 298508.9031 216162.2235 291068.8639 246129.7326 278322.4564 250935.8098 263796.5031 287098.1151 256750.6608 0.76197664 1.162641226 0.841914965 1.133663543 0.958633298 1.084018462 0.977352148 1.027442353 1.118198154 1 17.97000846 -4.742339527 24.93961881 1.029206779 0.761975725 0.443326621 0.09123797 1149.849932 1501335.515 0.020546861 0.745349161 1.81E-05 4.742339527 -0.267231053 ASS(ph)HSSQTQGGGSVTK ddPTM_A459_MK2206_30min_R1 3 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.126)S(0.674)HS(0.168)S(0.03)QT(0.003)QGGGSVTK;AS(0.023)S(0.519)HS(0.183)S(0.183)QT(0.092)QGGGSVTK;AS(0.003)S(0.982)HS(0.015)SQTQGGGSVTK 154.49 0.0001122 10190800 6784.52 7515.33 6396.71 5968.83 4461.12 4594.38 7522.4 9686.85 946.42 5823.29 TRUE FALSE 6207.460947 7026.080651 5962.519147 6428.550321 4283.424144 4854.509825 7020.594421 9602.158892 1044.803746 6544.723129 0.948468075 1.073548951 0.911042229 0.982249393 0.654485157 0.741744109 1.072710684 1.467160444 0.159640633 1 12.67611645 -5.665292159 2.288940797 0.879214288 1.004847134 0.029344286 0.316851189 1.528697846 16.19862209 0.092493804 0.190271302 2.16E-06 5.665292159 0.125632845 ASS(ph)HSSQTQGGGSVTK ddPTM_A459_MK2206_30min_R2 4 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.089)S(0.734)HS(0.171)S(0.007)QTQGGGSVTK;AS(0.123)S(0.727)HS(0.148)S(0.002)QTQGGGSVTK;AS(0.146)S(0.562)HS(0.069)S(0.187)QT(0.037)QGGGSVTK;AS(0.119)S(0.556)HS(0.301)S(0.022)QT(0.002)QGGGSVTK 103.01 0.0030651 10710230 23697.05 48500.5 33839.6 61486 53532.3 71118.1 60618.51 47118.6 73729.7 46844.76 TRUE FALSE 25511.31437 46092.0357 34967.79537 56462.39712 51430.35292 73824.54913 52659.22682 53277.1628 80142.57603 45316.21932 0.562962108 1.01712006 0.771639733 1.245964424 1.134921529 1.62909771 1.162039279 1.175675368 1.768518584 1 15.46773988 -5.744623261 1.173999563 1.344524361 0.717044103 0.483576061 0.24371554 0.457835308 1.224816414 0.084012797 0.231985462 1.80E-06 5.744623261 -0.627480258 ASS(ph)HSSQTQGGGSVTKK ddPTM_A459_MK2206_30min_R2 1 ASSHSSQTQGGGSVTKK 17 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.184)S(0.803)HS(0.01)S(0.003)QTQGGGSVTKK 79.293 0.0091617 4439500 4219.4 16205 10527 20296 25570 28764 19654 16920 43774 14894 TRUE FALSE 4542.440508 15400.28326 10877.96493 18637.75188 24565.99332 29858.63418 17073.40619 19131.5021 47581.38339 14408.01 0.315271888 1.068869557 0.754994265 1.293568777 1.705023339 2.07236351 1.184994055 1.327837925 3.302425761 1 13.81458347 -5.946969414 1.732801187 1.779934755 0.691885397 0.366420829 0.621134815 0.409600669 2.4926068 0.201141552 0.350162765 1.13E-06 5.946969414 -1.088049358 ASS(ph)LEDLVLK ddPTM_A459_MK2206_30min_R1 9 ASSLEDLVLK 10 0 Q15477 Q15477 SKIV2L Helicase SKI2W 1 AS(0.001)S(0.999)LEDLVLK;AS(0.003)S(0.997)LEDLVLK;AS(0.002)S(0.998)LEDLVLK;AS(0.001)S(0.999)LEDLVLK;AS(0.001)S(0.999)LEDLVLK;AS(0.022)S(0.978)LEDLVLK;AS(0.004)S(0.996)LEDLVLK;ASS(1)LEDLVLK;AS(0.009)S(0.991)LEDLVLK 223.87 7.36E-05 459654100 80185.73 81105 82232.1 71123.05 79408.23 68852.03 76004 75788.81 72712.75 65491.82 TRUE FALSE 73365.51259 75825.04976 76650.41416 76600.95963 76245.23205 72750.37244 70933.91184 75126.19642 80271.50057 73605.4411 0.996740343 1.030155497 1.041368858 1.040696971 1.035864074 0.988383078 0.963704731 1.020660909 1.090564765 1 16.1675248 -6.714602789 24.99981662 1.010893969 1.030372156 0.056424331 0.032686253 374.6234385 199960.8198 0.011472048 0.011471992 1.93E-07 6.714602789 0.019478188 ASS(ph)LEDLVLK ddPTM_A459_MK2206_30min_R2 11 ASSLEDLVLK 10 0 Q15477 Q15477 SKIV2L Helicase SKI2W 1 AS(0.008)S(0.992)LEDLVLK;AS(0.23)S(0.77)LEDLVLK;AS(0.011)S(0.989)LEDLVLK;ASS(1)LEDLVLK;ASS(1)LEDLVLK;AS(0.002)S(0.998)LEDLVLK;AS(0.078)S(0.922)LEDLVLK;AS(0.056)S(0.944)LEDLVLK;AS(0.014)S(0.986)LEDLVLK;AS(0.001)S(0.999)LEDLVLK;AS(0.002)S(0.998)LEDLVLK 240 3.27E-19 86355450 1555834.4 1955824.4 1717391.1 1951001.8 1940351.3 1609261.1 1983158.6 1494092.4 1645816.9 1817495.7 TRUE FALSE 1674950.278 1858701.004 1774648.062 1791598.712 1864163.358 1670502.659 1722767.494 1689375.407 1788967.079 1758190.964 0.952655492 1.057166737 1.009360245 1.019001206 1.060273541 0.950125836 0.979852319 0.960860021 1.017504421 1 20.74566035 -6.769975929 24.99992223 0.979108764 1.021161105 0.249388515 0.032783211 242.1964578 709284.8724 0.010943448 0.009805471 1.70E-07 6.769975929 0.042052341 ASS(ph)LGEIDESSELR ddPTM_A459_MK2206_30min_R1 1 ASSLGEIDESSELR 14 0 Q16513-3;Q16513-2;Q16513;Q16513-4;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 AS(0.065)S(0.935)LGEIDESSELR 283.66 6.65E-55 93882000 2924.8 2666.3 2395.1 2168 2543.8 2218.3 2683.1 2130.4 2055.1 1923.3 TRUE FALSE 2676.030401 2492.723385 2232.527285 2334.979736 2442.475059 2343.898229 2504.115295 2111.774137 2268.734999 2161.572924 1.238001444 1.153198838 1.032825338 1.080222513 1.129952653 1.08434844 1.158469033 0.976961783 1.04957597 1 11.07786579 -4.973469245 3.152965635 1.070470189 1.237011885 0.527041842 0.052415645 0.220678755 4.199477199 0.013874386 0.072825464 1.06E-05 4.973469245 0.166541697 ASS(ph)LGEIDESSELR ddPTM_A459_MK2206_30min_R2 2 ASSLGEIDESSELR 14 0 Q16513-3;Q16513-2;Q16513;Q16513-4;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 AS(0.001)S(0.999)LGEIDESSELR;AS(0.16)S(0.84)LGEIDESSELR 141.59 0.00055309 78772000 68574 76410 67439 80095 70028 82170 74270 69833 59263 62113 TRUE FALSE 73824.07816 72615.59051 69687.3826 73550.98229 67278.34886 85297.03693 64518.25979 78960.41287 64417.58862 60086.2579 1.228634978 1.208522432 1.159789027 1.224089914 1.119696104 1.419576454 1.073760657 1.314117664 1.072085213 1 15.87474745 -8.468036225 5.616648599 1.000434758 1.214567093 0.397948165 0.09175679 0.168387134 11.10466593 0.08106928 0.021039985 3.40E-09 8.468036225 0.214132335 ASS(ph)LNENVDHSALLK ddPTM_A459_MK2206_30min_R1 1 ASSLNENVDHSALLK 15 0 Q96SB3 Q96SB3 PPP1R9B Neurabin-2 1 AS(0.05)S(0.95)LNENVDHSALLK 163.91 9.30E-06 0 1482.2 1870 1675 1396.1 1653.3 1547.3 1452.1 1517.4 1375.3 1230.8 TRUE FALSE 1356.131107 1748.26266 1561.305667 1503.627864 1587.44556 1634.906789 1355.233059 1504.133532 1518.267357 1383.280796 0.980372973 1.263852332 1.128697565 1.087001185 1.147594591 1.181905217 0.979723757 1.087366741 1.097584352 1 10.43387833 -7.25210474 24.95718232 1.048449273 1.136155329 0.255155618 0.075013122 927.9667322 2481023.176 0.027911052 0.021324146 5.60E-08 7.25210474 0.087706056 ASS(ph)LNENVDHSALLK ddPTM_A459_MK2206_30min_R2 2 ASSLNENVDHSALLK 15 0 Q96SB3 Q96SB3 PPP1R9B Neurabin-2 1 AS(0.124)S(0.876)LNENVDHSALLK;AS(0.043)S(0.957)LNENVDHSALLK 192.23 2.97E-05 13252900 56334 67417 69461 71641 57028 59135 66647 51309 70976 57023 TRUE FALSE 60646.97435 64069.16981 71776.79507 65787.70113 54788.79418 61385.42386 57896.16884 58015.26247 77149.36418 55162.34418 1.099427069 1.161465684 1.301191893 1.19261975 0.99322817 1.112813909 1.049559617 1.051718583 1.398587484 1 15.75139615 -6.06260932 24.96309342 1.100802801 1.195128135 0.117709994 0.117102515 463.7247494 184891.4463 0.034435698 0.04445634 8.66E-07 6.06260932 0.094325334 ASS(ph)LNFLNK ddPTM_A459_MK2206_30min_R1 2 ASSLNFLNK 9 0 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 AS(0.002)S(0.998)LNFLNK;AS(0.003)S(0.997)LNFLNK 166.29 0.00091858 897520000 20573.4 19489.5 20440.1 16826.6 21052.3 17316.5 20240 19616.4 17958.1 15392.2 TRUE FALSE 18823.52429 18220.73001 19052.68296 18122.58765 20213.74231 18296.94527 18889.82653 19444.89588 19824.90876 17299.10194 1.088121474 1.053276064 1.101368327 1.047602801 1.168485068 1.057681799 1.091954172 1.124040771 1.146007973 1 14.07840952 ASS(ph)LNFLNK ddPTM_A459_MK2206_30min_R2 2 ASSLNFLNK 9 0 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 AS(0.005)S(0.995)LNFLNK;AS(0.004)S(0.996)LNFLNK 121.61 0.0062081 630440000 125017 134079 116920 132340 130780 108526 156451 99546 103085 109084 TRUE FALSE 134588.3976 127420.8318 120818.0544 121527.3987 125644.9201 112656.033 135908.7958 112557.004 112051.147 105524.598 1.275422036 1.20749886 1.144927881 1.151649956 1.190669497 1.067580783 1.287934741 1.066642338 1.061848603 1 16.68721981 -1.522893768 0.021757547 2.10E-07 2.651634247 0.507173765 0.064167226 2255.365361 3.793073976 167.0311153 317.4146088 0.029998962 1.522893768 2.651634037 ASS(ph)LNVLNVGGK ddPTM_A459_MK2206_30min_R1 2 ASSLNVLNVGGK 12 0 Q07866-6;Q07866-4;Q07866-7;G3V5R9;Q07866-9;H0YG16;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 AS(0.007)S(0.993)LNVLNVGGK;AS(0.002)S(0.998)LNVLNVGGK 247.73 3.02E-18 1219650000 28558 27450 29096 24518 28073 25503 28934 26260 25736 23112 TRUE FALSE 26128.99214 25663.00001 27121.04459 26406.38061 26954.79296 26946.95782 27003.86565 26030.41159 28411.3493 25975.28905 1.005917281 0.987977457 1.044109443 1.016596218 1.037709067 1.037407429 1.039598274 1.002122115 1.093783759 1 14.66485218 -5.260211219 24.99896576 1.033836144 0.996947367 0.255575932 0.0252369 128.592726 2617410.355 0.006027615 0.01409635 5.49E-06 5.260211219 -0.036888777 ASS(ph)LNVLNVGGK ddPTM_A459_MK2206_30min_R2 6 ASSLNVLNVGGK 12 0 Q07866-6;Q07866-4;Q07866-7;G3V5R9;Q07866-9;H0YG16;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 AS(0.227)S(0.773)LNVLNVGGK;AS(0.099)S(0.901)LNVLNVGGK;AS(0.179)S(0.821)LNVLNVGGK;AS(0.137)S(0.863)LNVLNVGGK;AS(0.011)S(0.989)LNVLNVGGK;AS(0.259)S(0.741)LNVLNVGGK 171.11 0.00027924 1337456900 1171932 1361790 1286143 1369046 1266726 1165487 1476622 1141957 1160225 1274121 TRUE FALSE 1261656.015 1294165.489 1329022.366 1257190.562 1216987.972 1209840.424 1282739.758 1291214.701 1261139.273 1232546.536 1.023617347 1.049993206 1.07827358 1.019994398 0.987376896 0.981577887 1.040723186 1.047599148 1.023198099 1 20.23321069 -5.924132513 9.928956944 1.014492506 1.050471935 0.341622931 0.023201502 0.472607513 58.14442082 0.007258148 0.01077777 1.19E-06 5.924132513 0.035979429 ASS(ph)LPGSLQR ddPTM_A459_MK2206_30min_R1 2 ASSLPGSLQR 10 0 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 AS(0.049)S(0.951)LPGSLQR;AS(0.006)S(0.991)LPGS(0.003)LQR 106.16 0.012072 22136700 6878.6 5832 4999.3 3834.5 4815.9 4364.7 4969.4 4574.4 4296.2 3563.8 TRUE FALSE 6293.538949 5452.33574 4659.961445 4129.833854 4624.072505 4611.825542 4637.900393 4534.406503 4742.805364 4005.310449 1.571298662 1.361276687 1.163445756 1.031089576 1.154485417 1.151427736 1.157937806 1.132098638 1.184129276 1 11.96769835 -4.99880072 2.034525382 1.124122847 1.605216642 0.870794905 0.056141266 0.151693342 0.961830448 0.015232079 0.115922955 1.00E-05 4.99880072 0.481093795 ASS(ph)LPGSLQR ddPTM_A459_MK2206_30min_R2 1 ASSLPGSLQR 10 0 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 AS(0.055)S(0.945)LPGSLQR 94.82 0.023427 14837000 40112 40463 24481 30371 27353 27034 29113 24646 33619 27598 TRUE FALSE 43183.00556 38453.66626 25297.18432 27889.59215 26278.98378 28062.79781 25290.42813 27867.31682 36543.11985 26697.47952 1.617493724 1.440348188 0.947549536 1.044652628 0.984324523 1.051140344 0.947296471 1.043818268 1.368785388 1 14.70441592 -5.11848538 3.871952282 1.044669678 1.585637281 0.739883018 0.115695185 0.109344599 2.796773898 0.03016288 0.096347663 7.61E-06 5.11848538 0.540967603 ASS(ph)PAESS(ph)PEDSGYMR ddPTM_A459_MK2206_30min_R2 2 ASSPAESSPEDSGYMR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 2 AS(0.001)S(0.999)PAES(0.009)S(0.991)PEDSGYMR;AS(0.003)S(0.997)PAES(0.293)S(0.694)PEDS(0.013)GYMR 208.38 1.15E-06 7748600 21628 28700 23806 30506 24756 29995 27673 23490 26348 25047 TRUE FALSE 23283.85631 27274.79973 24599.68016 28013.56222 23783.95505 31136.48074 24039.50186 26560.22365 28639.70141 24229.71844 0.960962727 1.125675472 1.015268923 1.156165404 0.981602618 1.285053346 0.992149451 1.096183751 1.18200719 1 14.56449002 -4.753080247 24.56426166 1.094648187 0.960962414 0.151609177 0.093370115 460.9053913 1354291.078 0.021432039 0.235218891 1.77E-05 4.753080247 -0.133685773 ASS(ph)PAESSPEDSGYMR ddPTM_A459_MK2206_30min_R2 1 ASSPAESSPEDSGYMR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 AS(0.001)S(0.885)PAES(0.031)S(0.083)PEDS(0.001)GYMR 146.84 0.00033464 12989000 30709 36684 33768 38932 38067 40367 36606 21732 28823 28937 TRUE FALSE 33060.10465 34862.3259 34893.80827 35751.13106 36572.29831 41903.19447 31799.58823 24572.44702 31329.97244 27992.78806 1.181022218 1.245403846 1.246528506 1.277155065 1.306490023 1.496928222 1.135992176 0.877813491 1.119215863 1 14.77276756 -7.520545371 24.27885531 1.000489282 1.290378402 0.665076678 0.093886718 38.89637157 404740.1525 0.043643574 0.025765686 3.02E-08 7.520545371 0.289889121 ASS(ph)PAQCVTPVQTVV ddPTM_A459_MK2206_30min_R2 1 ASSPAQCVTPVQTVV 15 0 Q13614;Q13614-2 Q13614 MTMR2 Myotubularin-related protein 2 1 AS(0.15)S(0.85)PAQCVTPVQTVV 127.18 0.0010792 8913900 16190 22748 21546 25766 18818 19992 23769 15767 17220 20652 TRUE FALSE 17429.51885 21618.3674 22264.33289 23660.83538 18079.11077 20752.80957 20648.10175 17827.80104 18717.76447 19978.12693 0.872430079 1.082101814 1.11443545 1.184337023 0.904945235 1.03877654 1.033535417 0.892365991 0.936912882 1 14.28613371 -7.305585031 1.189111016 0.941561266 1.050404899 0.129818511 0.091855155 0.890841958 2.434335614 0.064752035 0.035608949 4.95E-08 7.305585031 0.108843634 ASS(ph)PCHSPR ddPTM_A459_MK2206_30min_R2 1 ASSPCHSPR 9 0 A0A494BYR6;Q86Y91-6;Q86Y91 A0A494BYR6 KIF18B Kinesin-like protein KIF18B 1 AS(0.005)S(0.995)PCHSPR 136.49 0.0026355 7313200 32280 28332 21990 33290 41006 29553 29833 79218 55657 38582 TRUE FALSE 34751.38162 26925.07408 22723.13562 30570.10051 39395.8984 30677.66012 25915.89126 89572.0646 60497.94526 37323.0725 0.931096485 0.721405615 0.60882275 0.819067093 1.055537386 0.821948947 0.694366501 2.399911331 1.620926178 1 15.18778014 -7.739611247 24.99811106 1.757814243 0.807058105 0.57640805 0.337955184 136.9278591 156813.4117 0.150834729 0.086990462 1.82E-08 7.739611247 -0.950756138 ASS(ph)PCPEFEQFQIVPAVETPYLAR ddPTM_A459_MK2206_30min_R1 2 ASSPCPEFEQFQIVPAVETPYLAR 24 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 AS(0.051)S(0.949)PCPEFEQFQIVPAVETPYLAR;AS(0.045)S(0.955)PCPEFEQFQIVPAVETPYLAR 149.44 8.38E-10 15408500 1884.2 1551.54 1734.96 1820.55 2042.47 1921.33 1733.44 2019.52 1569.76 1323.48 TRUE FALSE 1723.938896 1450.534464 1617.195749 1960.769076 1961.114095 2030.114044 1617.80538 2001.86355 1732.942169 1487.442694 1.158995168 0.975186788 1.087232305 1.318214869 1.318446823 1.364835131 1.087642157 1.34584247 1.165048023 1 10.53861837 -5.664377456 6.403279099 1.246165146 1.059393927 0.250177547 0.119998816 0.239892071 13.34394455 0.031122144 0.054226085 2.17E-06 5.664377456 -0.186771219 ASS(ph)PCPEFEQFQIVPAVETPYLAR ddPTM_A459_MK2206_30min_R2 1 ASSPCPEFEQFQIVPAVETPYLAR 24 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 AS(0.064)S(0.936)PCPEFEQFQIVPAVETPYLAR 85.925 6.71E-05 15225000 7086.8 7410.1 8294.3 11147 11060 5881.1 7456.6 7808.5 10398 11141 TRUE FALSE 7629.370857 7042.125209 8570.827822 10236.25444 10625.72883 6104.909382 6477.539463 8829.097761 11302.39924 10777.47008 0.70789998 0.653411715 0.795254151 0.949782682 0.985920513 0.566451063 0.601025975 0.819218025 1.048706158 1 13.39573094 -8.171087264 4.427967459 1.023846191 0.756309814 0.4072071 0.129230077 0.24543471 8.137586793 0.108428636 0.037333578 6.74E-09 8.171087264 -0.267536377 ASS(ph)PEKAEEDR ddPTM_A459_MK2206_30min_R1 3 ASSPEKAEEDR 11 1 Q8N3D4;H0YDZ9 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 AS(0.055)S(0.945)PEKAEEDR;AS(0.227)S(0.773)PEKAEEDR;AS(0.225)S(0.775)PEKAEEDR 226.42 2.52E-06 53164000 15592.4 18254.9 17614.9 15826.9 11112.3 10304.8 13236.5 13531.9 8087.6 13522.5 TRUE FALSE 14266.1845 17066.50269 16419.24967 17045.89058 10669.67356 10888.24887 12353.51724 13413.59202 8928.334962 15197.76939 0.938702525 1.122961025 1.080372339 1.121604766 0.702055235 0.7164373 0.812850684 0.882602682 0.587476671 1 13.89157197 -6.258707256 24.99950254 0.775807916 1.071018247 0.594227762 0.114159706 158.8148173 1453186.83 0.032828074 0.040506606 5.51E-07 6.258707256 0.295210332 ASS(ph)PEKAEEDR ddPTM_A459_MK2206_30min_R2 1 ASSPEKAEEDR 11 1 Q8N3D4;H0YDZ9 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 AS(0.187)S(0.813)PEKAEEDR 79.744 0.024803 21137000 97981 92123 89956 74748 86968 73527 103170 68383 70895 93093 TRUE FALSE 105482.5007 87548.30578 92955.08814 68640.84929 83553.19934 76325.12151 89623.65507 77320.89289 77061.31895 90055.38303 1.171307002 0.972160717 1.032199131 0.762207066 0.927797945 0.84753536 0.995205973 0.858592683 0.855710301 1 16.45852489 -4.440995182 1.108208473 0.895475793 1.495539134 0.517616814 0.077239024 2.452584165 1.51394295 0.022909148 2.060933991 3.62E-05 4.440995182 0.600063341 ASS(ph)PFR ddPTM_A459_MK2206_30min_R1 2 ASSPFR 6 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AS(0.121)S(0.879)PFR;AS(0.036)S(0.964)PFR 129.68 0.01223 117096000 5338.6 5096.2 4056.6 3670.6 3499.5 3601.5 5796.5 4448.1 921.53 4522.7 TRUE FALSE 4884.524036 4764.436454 3781.249294 3953.310248 3360.107505 3805.413818 5409.826061 4409.210731 1017.326341 5083.006221 0.960951812 0.937326505 0.74390019 0.777750425 0.661047293 0.748654173 1.064296565 0.867441537 0.200142651 1 12.31146628 -5.239103147 6.978795727 0.760956428 0.950719969 0.1073665 0.220449197 0.439581559 93.92775994 0.056338225 0.143862277 5.77E-06 5.239103147 0.189763542 ASS(ph)PFR ddPTM_A459_MK2206_30min_R2 5 ASSPFR 6 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AS(0.123)S(0.877)PFR;AS(0.103)S(0.897)PFR;AS(0.096)S(0.904)PFR;AS(0.096)S(0.904)PFR;AS(0.025)S(0.975)PFR 107.59 0.025761 1489280000 1028930 960359 878068 1146840 975280 904900 1077940 1046411 911599 1139770 TRUE FALSE 1107705.672 912668.9686 907342.3489 1053139.503 936985.6068 939336.6036 936405.1832 1183180.511 990888.2332 1102579.398 1.004649347 0.827758046 0.822926993 0.955159787 0.849812366 0.851944636 0.849285942 1.07310232 0.898700116 1 20.07245112 -7.742380413 24.9999952 0.989425953 0.876623571 0.360350989 0.067267886 237.5762397 311633.8756 0.030412387 0.017522194 1.81E-08 7.742380413 -0.112802382 ASS(ph)PFRR ddPTM_A459_MK2206_30min_R1 1 ASSPFRR 7 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 ASS(1)PFRR 109.48 0.028418 372090000 10793 9703.4 9391.8 8149.5 9094 8314.1 10491 9646 1818.2 6660.2 TRUE FALSE 9874.998674 9071.706896 8754.310783 8777.175902 8731.766723 8784.837157 9791.164532 9561.666039 2007.208396 7485.315858 1.319249429 1.211933747 1.169531246 1.172585909 1.166519475 1.173609414 1.308049616 1.277389788 0.268152799 1 12.86984748 -8.24109393 24.98990554 0.634076372 1.219961205 0.651533396 0.172792527 378.4690506 464867.5619 0.106266144 0.040061085 5.74E-09 8.24109393 0.585884833 ASS(ph)PGYIDSPTYSR ddPTM_A459_MK2206_30min_R1 1 ASSPGYIDSPTYSR 14 0 A0A0C4DGA7;O94929-3;O94929-2;O94929 A0A0C4DGA7 ABLIM3 Actin-binding LIM protein 3 1 AS(0.005)S(0.995)PGYIDSPTYSR 147.52 0.00047698 13345000 3411.4 3097.2 3191 2930.2 3236.7 2690.1 3339.5 2798.7 3070.6 3038.6 TRUE FALSE 3121.242516 2895.571717 2974.403811 3155.884512 3107.775385 2842.411137 3116.728048 2774.231261 3389.799858 3415.044708 0.913968274 0.847886913 0.87097068 0.92411221 0.910024802 0.83232033 0.912646338 0.812355766 0.992607754 1 11.73768875 -8.289108291 21.75993113 0.996304397 0.87902726 0.631883879 0.036101518 103.4048532 81317.70594 0.033307792 0.008617968 5.14E-09 8.289108291 -0.117277137 ASS(ph)PPDRIDIFGR ddPTM_A459_MK2206_30min_R1 3 ASSPPDRIDIFGR 13 1 Q9NWB6-2;Q9NWB6 Q9NWB6-2 ARGLU1 Arginine and glutamate-rich protein 1 1 AS(0.151)S(0.849)PPDRIDIFGR;AS(0.331)S(0.669)PPDRIDIFGR;AS(0.066)S(0.934)PPDRIDIFGR 127.52 0.0010552 908360000 15462.2 14325.9 15429.7 13619.1 17369.7 13910.9 12879.4 15133.9 8556.3 5488.1 TRUE FALSE 14147.05869 13393.28131 14382.37495 14668.04544 16677.82807 14698.52314 12020.23873 15001.58591 9445.758004 6168.007261 2.293619008 2.171411404 2.331770107 2.378084983 2.703924844 2.383026238 1.948804244 2.43216087 1.531411622 1 12.59058875 -8.453042768 2.781544263 1.002010169 2.331491605 0.849496943 0.185320016 0.091371743 1.491422306 0.18768871 0.050668116 3.52E-09 8.453042768 1.329481436 ASS(ph)PPDRIDIFGR ddPTM_A459_MK2206_30min_R2 4 ASSPPDRIDIFGR 13 1 Q9NWB6-2;Q9NWB6 Q9NWB6-2 ARGLU1 Arginine and glutamate-rich protein 1 1 AS(0.044)S(0.956)PPDRIDIFGR;AS(0.073)S(0.927)PPDRIDIFGR;AS(0.355)S(0.645)PPDRIDIFGR;AS(0.2)S(0.8)PPDRIDIFGR 73.758 0.027986 630824000 56039.5 132398 93734 124188 120266 120476 101103 71237 122754 82166 TRUE FALSE 60329.92721 125823.3078 96859.04478 114041.4431 115543.7526 125060.7986 87828.05465 80547.92049 133430.921 79484.93015 0.759010885 1.582983184 1.218583757 1.434755531 1.453656087 1.573390055 1.104964859 1.013373483 1.678694575 1 16.27839374 -10.58686204 3.980055591 0.999942999 1.318821887 0.10404443 0.275351587 186975336.8 303847003.9 142016.4044 0.065792628 2.59E-11 10.58686204 0.318878889 ASS(ph)PPPQPQPPPPPAR ddPTM_A459_MK2206_30min_R1 1 ASSPPPQPQPPPPPAR 16 0 Q9H7P9;Q9H7P9-3;H7BXC7 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 AS(0.02)S(0.98)PPPQPQPPPPPAR 226.88 4.51E-15 9142400 2042.5 2002.7 1914.3 1929.2 1925.3 1960.5 1965.4 1842 1899.3 1730.3 TRUE FALSE 1868.774649 1872.323866 1784.36265 2077.787318 1848.611224 2071.501816 1834.291752 1825.895588 2096.739032 1944.662627 0.960976276 0.962801383 0.917569261 1.068456446 0.950607678 1.065224264 0.943244204 0.938926661 1.078201947 1 10.92530417 -5.732379993 24.99998326 1.00133284 0.948684231 0.218883649 0.050654458 356.9108782 307050.03 0.013298344 0.023028754 1.85E-06 5.732379993 -0.052648608 ASS(ph)PPPQPQPPPPPAR ddPTM_A459_MK2206_30min_R2 4 ASSPPPQPQPPPPPAR 16 0 Q9H7P9;Q9H7P9-3;H7BXC7 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 AS(0.122)S(0.878)PPPQPQPPPPPAR;AS(0.146)S(0.854)PPPQPQPPPPPAR;AS(0.008)S(0.992)PPPQPQPPPPPAR;AS(0.002)S(0.998)PPPQPQPPPPPAR 158.93 6.53E-05 39006800 52367 71048 57719 70526 59061 62260 68534 56594 56046 61170 TRUE FALSE 56376.25778 67519.85963 59643.32265 64763.8002 56741.96838 64629.34793 59535.40348 63991.03012 60920.77977 59174.02791 0.952719627 1.141038763 1.007930755 1.094463272 0.958899882 1.092191122 1.006106996 1.081403994 1.029518894 1 15.85267648 -8.536371229 22.3713389 0.999999994 1.044244278 0.043954027 0.058313305 1656.474664 2746539.787 0.050555768 0.013053443 2.91E-09 8.536371229 0.044244283 ASS(ph)PSEHGPR ddPTM_A459_MK2206_30min_R2 3 ASSPSEHGPR 10 0 C9J052;Q9NSU2-2;Q9NSU2;Q9NSU2-1 C9J052 TREX1 Three-prime repair exonuclease 1 1 AS(0.281)S(0.555)PS(0.165)EHGPR;AS(0.204)S(0.691)PS(0.104)EHGPR;AS(0.041)S(0.957)PS(0.002)EHGPR 113.44 0.0076237 12444200 16566.5 24248.1 23808.6 34062.4 38274.1 35912.6 26517.6 31630 50189.1 25557.3 TRUE FALSE 17834.84398 23043.97461 24602.36684 31279.39296 36771.26652 37279.27916 23035.80727 35764.1496 54554.4572 24723.36739 0.721376004 0.932072652 0.995105822 1.265175268 1.487308178 1.507856052 0.931742303 1.446572752 2.206594932 1 14.59358764 -5.627774815 1.270127212 1.439263862 0.762556622 0.368002732 0.326429771 0.592319175 1.806786097 0.112548444 0.350744503 2.36E-06 5.627774815 -0.67670724 ASS(ph)PSLIER ddPTM_A459_MK2206_30min_R1 1 ASSPSLIER 9 0 A1L170;A1L170-2 A1L170 C1orf226 Uncharacterized protein C1orf226 1 AS(0.152)S(0.845)PS(0.002)LIER 97.597 0.02045 2024100 1996 2267.1 1784.7 1685.3 2233.6 2574.9 2246.8 2669.5 1682.6 1700.2 TRUE FALSE 1826.229719 2119.511378 1663.559536 1815.102098 2144.630982 2720.688613 2096.920072 2646.160843 1857.512291 1910.833612 0.955724092 1.109207712 0.870593612 0.949900654 1.122353599 1.423822878 1.097384963 1.384820126 0.972095257 1 10.89998644 -6.411289394 4.668993072 1.20191892 0.975758518 0.290591381 0.147722037 0.255991626 8.800874616 0.044538905 0.050379998 3.88E-07 6.411289394 -0.226160403 ASS(ph)PSPLTIGTPESQR ddPTM_A459_MK2206_30min_R1 1 ASSPSPLTIGTPESQR 16 0 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 AS(0.033)S(0.938)PS(0.023)PLT(0.006)IGTPESQR 115.26 0.0020143 6232700 1219.1 1169.2 1364.9 890.95 1204.8 978.7 1153.5 900.32 1317 1498 TRUE FALSE 1115.409143 1093.084867 1272.254391 959.5711234 1156.810265 1034.113148 1076.55212 892.4485972 1453.906863 1683.583549 0.662520814 0.649260839 0.755682361 0.569957531 0.687111884 0.614233341 0.639440864 0.530088689 0.863578682 1 10.7173196 -8.471542673 4.553568237 0.998691495 0.642280099 0.808948681 0.05876095 0.071461539 3.154511052 0.05538741 0.014454554 3.38E-09 8.471542673 -0.356411396 ASS(ph)SGPRSPLDQR ddPTM_A459_MK2206_30min_R1 1 ASSSGPRSPLDQR 13 1 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 AS(0.141)S(0.712)S(0.141)GPRS(0.006)PLDQR 75.316 0.02606 70109000 8513.4 7836.6 7960.1 7609.4 8564.2 8156.7 8545.2 8052.7 5814 4958.8 TRUE FALSE 7789.290624 7326.435916 7419.79059 8195.477306 8223.069779 8618.525305 7975.1653 7982.296093 6418.386106 5573.133581 1.397650085 1.314599015 1.331349856 1.470533083 1.475484063 1.546441545 1.431002 1.432281494 1.151665578 1 12.44427302 -9.777669256 6.711993501 1 1.401609153 0.563954415 0.103915235 4554326.074 884599.5028 0.104813818 0.026203454 1.67E-10 9.777669256 0.401609153 ASS(ph)VGVLSPQKK ddPTM_A459_MK2206_30min_R1 1 ASSVGVLSPQKK 12 1 Q9UGU5 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 AS(0.027)S(0.833)VGVLS(0.141)PQKK 168.76 0.00067404 36983000 3356.1 4064.5 4140.1 3101.9 2663.1 2697.1 3034.1 2876.2 2667.9 2714.3 TRUE FALSE 3070.646071 3799.900311 3859.081547 3340.808875 2557.023088 2849.807471 2831.700725 2851.053687 2945.237752 3050.567976 1.006581756 1.24563699 1.265037061 1.095143233 0.838212132 0.934189139 0.928253606 0.934597658 0.96547193 1 11.57486216 -6.061401371 5.235673689 0.93114739 1.180503029 0.679518931 0.075158313 0.114730785 6.407122676 0.022149314 0.029453999 8.68E-07 6.061401371 0.249355639 ASS(ph)VTTFTGEPNTCPR ddPTM_A459_MK2206_30min_R1 1 ASSVTTFTGEPNTCPR 16 0 H0YFA4;P52943;P52943-2 H0YFA4 CRIP2 Cysteine-rich protein 2 1 AS(0.004)S(0.994)VT(0.002)TFTGEPNTCPR 177.39 1.16E-06 7781500 1674.8 1958.2 1532.6 1360.9 1540.3 1500.9 1731.9 1524.8 1413.7 1384.5 TRUE FALSE 1532.349465 1830.720824 1428.571382 1465.716754 1478.946589 1585.879661 1616.368111 1511.468834 1560.659174 1556.022312 0.984786306 1.176538928 0.918091836 0.941963841 0.950466184 1.019188252 1.038782091 0.97136707 1.002979945 1 10.60364703 -5.273546662 24.99945346 0.980367327 1.080662628 0.345260541 0.055252885 719.4091586 1485456.48 0.014289479 0.030087138 5.33E-06 5.273546662 0.100295301 ASS(ph)VTTFTGEPNTCPR ddPTM_A459_MK2206_30min_R2 4 ASSVTTFTGEPNTCPR 16 0 H0YFA4;P52943;P52943-2 H0YFA4 CRIP2 Cysteine-rich protein 2 1 ASS(0.587)VT(0.409)T(0.004)FTGEPNTCPR;AS(0.211)S(0.763)VT(0.026)TFTGEPNTCPR;AS(0.222)S(0.548)VT(0.222)T(0.004)FT(0.004)GEPNTCPR;AS(0.008)S(0.942)VT(0.02)T(0.006)FT(0.023)GEPNT(0.001)CPR 177.39 1.16E-06 69905000 135481 223701 156930 170314 143586 157501 130120 127972 167606 127751 TRUE FALSE 145853.5295 212592.3336 162161.9679 156398.8014 137948.0922 163494.8109 113035.0877 144698.3798 182184.0669 123582.4953 1.180211883 1.720246327 1.312175866 1.265541701 1.116242974 1.322960914 0.9146529 1.170864688 1.474189904 1 16.91511488 -5.698456848 2.656368267 1.174264437 1.458454247 0.237731502 0.192226795 0.352658583 5.039367585 0.053947741 0.102327154 2.00E-06 5.698456848 0.28418981 ASSAS(ph)VPAVGASAEGTRR ddPTM_A459_MK2206_30min_R1 1 ASSASVPAVGASAEGTRR 18 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 "Pantothenate kinase 2, mitochondrial" 1 ASS(0.09)AS(0.91)VPAVGASAEGTRR 199.84 3.18E-10 12883000 1862.4 1851.2 1887.2 1696.8 2421.5 1836 1925.7 2413.6 1471.3 1446.6 TRUE FALSE 1703.9931 1730.686544 1759.102122 1827.48783 2325.046527 1939.952733 1797.240067 2392.49815 1624.2469 1625.815729 1.048085013 1.064503506 1.081981242 1.12404364 1.430079981 1.193218086 1.105438971 1.471567845 0.999035051 1 10.66694804 -6.011516154 23.92484286 1.223744011 1.071186399 0.133050966 0.148381085 521.7699425 1083985.7 0.040737385 0.05592968 9.74E-07 6.011516154 -0.152557612 ASSDGEGTMSRPASVDGSPVS(ph)PSTNR ddPTM_A459_MK2206_30min_R2 2 ASSDGEGTMSRPASVDGSPVSPSTNR 26 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 ASSDGEGTMSRPASVDGS(0.003)PVS(0.713)PS(0.215)T(0.069)NR;ASSDGEGT(0.001)MS(0.001)RPAS(0.013)VDGS(0.061)PVS(0.707)PS(0.172)T(0.045)NR 68.406 0.000632 22081300 21944.2 34879.8 36720.8 42361 43414.9 40325 29665 19453.8 30583 21505.6 TRUE FALSE 23624.26482 33147.71985 37945.05314 38899.97079 41710.21288 41859.59613 25769.94987 21996.47845 33243.05406 20803.87403 1.135570461 1.593343615 1.823941689 1.869842642 2.004925276 2.012105825 1.238709186 1.057326074 1.597926137 1 14.34456459 -7.28206342 23.57324037 1.228267325 1.75505642 0.451978536 0.278285352 390.9525106 446855.0569 0.122430956 0.082676702 5.22E-08 7.28206342 0.526789095 ASSDGEGTMSRPASVDGSPVSPS(ph)TNR ddPTM_A459_MK2206_30min_R2 2 ASSDGEGTMSRPASVDGSPVSPSTNR 26 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 ASSDGEGTMSRPAS(0.005)VDGS(0.041)PVS(0.264)PS(0.529)T(0.161)NR;ASS(0.001)DGEGT(0.005)MS(0.005)RPAS(0.005)VDGS(0.172)PVS(0.176)PS(0.318)T(0.318)NR 59.226 0.0037807 22606200 21039.9 31718 29173.1 46887 35207 31287.7 27840 25521.8 24379.9 20005.7 TRUE FALSE 22650.73092 30142.93024 30145.71659 43056.18212 33824.59628 32478.37535 24184.57456 28857.58689 26500.41963 19352.91565 1.170404054 1.557539484 1.557683459 2.224790461 1.747777797 1.678216138 1.249660516 1.491123478 1.369324401 1 14.24026331 -8.339199764 0.757763934 1.025227966 1.660490404 0.34122309 0.264672329 0.785335971 1.013185297 0.275165034 0.10819814 4.58E-09 8.339199764 0.635262438 ASSDLPS(ph)PLEK ddPTM_A459_MK2206_30min_R1 1 ASSDLPSPLEK 11 0 Q9H161 Q9H161 ALX4 Homeobox protein aristaless-like 4 1 AS(0.002)S(0.03)DLPS(0.968)PLEK 100.73 0.015978 4461600 3257.5 2905.5 2963 2415.7 2463.7 2080.8 2639.7 2872.4 2473.2 2651.8 TRUE FALSE 2980.432519 2716.351422 2761.879815 2601.757633 2365.565612 2198.613098 2463.610429 2847.28691 2730.29799 2980.325004 1.000036075 0.911427921 0.926704239 0.872977823 0.793727398 0.737709174 0.826624756 0.955361213 0.916107467 1 11.54125395 -11.06042588 20.85749687 0.999999989 0.877840021 0.181882275 0.074350453 1.08E-10 0 0.080515833 0.019527958 8.70E-12 11.06042588 -0.122159968 ASSDLSIAS(ph)SEEDKLSQNACILESVSEK ddPTM_A459_MK2206_30min_R1 1 ASSDLSIASSEEDKLSQNACILESVSEK 28 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 ASSDLS(0.003)IAS(0.824)S(0.17)EEDKLS(0.003)QNACILESVSEK 93.176 3.15E-06 5941300 1493.7 1614.6 1869.9 1617.7 1046.8 977.75 1456.6 1548.9 1524.4 1619.9 TRUE FALSE 1366.652971 1509.489247 1742.976398 1742.295534 1005.103739 1033.10936 1359.432872 1535.358131 1682.866835 1820.585442 0.750666758 0.829122991 0.957371381 0.9569974 0.552077214 0.56745997 0.746700946 0.843332093 0.924354769 1 10.83018673 -10.26855793 6.912605534 1 0.789332722 0.171399218 0.137079832 1.07E-09 1.60E-10 0.148142588 0.035929855 5.39E-11 10.26855793 -0.210667278 ASSEDAGPS(ph)PQTR ddPTM_A459_MK2206_30min_R1 1 ASSEDAGPSPQTR 13 0 Q5T5P2-3;Q5T5P2;Q5T5P2-4;Q5T5P2-8;Q5T5P2-6;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-10 Q5T5P2-3 KIAA1217 Sickle tail protein homolog 1 ASSEDAGPS(0.977)PQT(0.023)R 136.14 0.0015064 0 928.12 695.04 854.45 606.52 900.42 694.64 980.93 711.19 536.17 557.16 TRUE FALSE 849.1785202 649.7927697 796.4523146 653.2342755 864.5543647 733.9699165 915.4939495 704.9721408 591.9067902 626.1851871 1.356114034 1.03770064 1.271911778 1.043196628 1.380668822 1.172129159 1.462017896 1.125820532 0.945258371 1 9.290445571 -8.002852645 24.99351915 0.993599217 1.238023657 0.409751612 0.130545616 107.326294 940334.2552 0.070605803 0.032924064 9.93E-09 8.002852645 0.24442444 ASSEDVAS(ph)SPER ddPTM_A459_MK2206_30min_R2 1 ASSEDVASSPER 12 0 M0R2H0;A0A087WWI0;Q9H2I8 M0R2H0 C10orf11 Leucine-rich repeat-containing protein C10orf11 1 ASSEDVAS(0.5)S(0.5)PER 79.283 0.04234 9178000 27308 42529 34811 36441 29144 33689 44643 32274 33864 36230 TRUE FALSE 29398.72148 40417.0717 35971.58137 33463.65373 27999.66012 34971.0585 38781.32047 36492.32261 36809.42951 35047.81807 0.838817453 1.153197943 1.026357227 0.954799916 0.798898809 0.997809862 1.106525958 1.041215249 1.050263084 1 15.09703701 -7.007649291 24.95943334 1.052826007 0.962363901 0.182539876 0.094005427 686.8797181 2241274.553 0.035689095 0.030158745 9.83E-08 7.007649291 -0.090462105 ASSEDVASS(ph)PER ddPTM_A459_MK2206_30min_R1 2 ASSEDVASSPER 12 0 M0R2H0;A0A087WWI0;Q9H2I8 M0R2H0 C10orf11 Leucine-rich repeat-containing protein C10orf11 1 ASSEDVAS(0.002)S(0.998)PER;ASSEDVAS(0.002)S(0.998)PER 184.96 0.00010389 11435600 11012.2 9246.9 9323.3 7829.8 10525.3 9314 11760.8 12061.7 9740.3 9592.1 TRUE FALSE 10075.55456 8644.925129 8690.460372 8432.852553 10106.05501 9841.350631 10976.25849 11956.24583 10752.83904 10780.44176 0.934614256 0.801908244 0.80613212 0.78223627 0.937443496 0.912889364 1.018164073 1.109068264 0.997439555 1 13.39612868 -6.921205852 1.434064033 1.043184215 0.831713405 0.710109025 0.054707011 0.210620388 0.891270828 0.027239179 0.021478305 1.20E-07 6.921205852 -0.21147081 ASSEDVASS(ph)PER ddPTM_A459_MK2206_30min_R2 1 ASSEDVASSPER 12 0 M0R2H0;A0A087WWI0;Q9H2I8 M0R2H0 C10orf11 Leucine-rich repeat-containing protein C10orf11 1 ASSEDVAS(0.031)S(0.969)PER 90.697 0.024054 13425000 38707 46427 37143 42608 38392 47289 46955 44579 40978 43068 TRUE FALSE 41670.43768 44121.50269 38381.32908 39126.7901 36884.53718 49088.61603 40789.7521 50405.62836 44542.19237 41662.69469 1.00018585 1.059017018 0.921239717 0.939132488 0.885313287 1.178239103 0.97904738 1.209850413 1.069114533 1 15.34646853 -6.759589777 24.99999998 1.093603252 0.963003021 0.389572446 0.07881111 51.233448 692495.9836 0.026280703 0.025015861 1.74E-07 6.759589777 -0.130600231 ASSESSYLSILPKT(ph)PEGISEEQR ddPTM_A459_MK2206_30min_R1 1 ASSESSYLSILPKTPEGISEEQR 23 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 ASSESSYLSILPKT(0.911)PEGIS(0.089)EEQR 74.63 0.0013399 5702300 400.15 406.93 348.79 473.38 388.56 323.68 478.62 520.39 339.39 271.04 TRUE FALSE 366.1151412 380.438783 325.1151066 509.8398096 373.0828324 342.0064819 446.6921331 515.8402851 374.670805 304.6184814 1.201880922 1.2489025 1.067286217 1.673699531 1.224754423 1.122737137 1.46639866 1.693397862 1.229967411 1 8.250859664 ASSESSYLSILPKT(ph)PEGISEEQR ddPTM_A459_MK2206_30min_R2 1 ASSESSYLSILPKTPEGISEEQR 23 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 ASSESSYLSILPKT(0.982)PEGIS(0.018)EEQR 119.87 1.47E-05 5022300 6157 13615 9848.2 12297 16992 13250 16990 10208 15814 10395 TRUE FALSE 6628.384654 12938.8989 10176.53407 11292.29576 16324.8087 13754.23803 14759.19259 11542.22065 17189.47313 10055.812 0.659159564 1.286708512 1.012005204 1.1229621 1.623420237 1.367789894 1.467727578 1.147815875 1.709406772 1 13.29574196 -4.348583072 0.714900937 1.378995032 2.13E-11 0.399717516 0.233320124 5.165643247 1.297180412 0.091404122 6.617700512 4.48E-05 4.348583072 -1.378995032 ASSESSYLSILPKTPEGIS(ph)EEQR ddPTM_A459_MK2206_30min_R2 1 ASSESSYLSILPKTPEGISEEQR 23 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 ASSESSYLSILPKT(0.333)PEGIS(0.667)EEQR 125.05 5.64E-06 5786000 5366.6 16588 13630 13705 15342 15191 16593 9843.8 13286 12117 TRUE FALSE 5777.471022 15764.26404 14084.4174 12585.25766 14739.59599 15769.10415 14414.31917 11130.41846 14441.59226 11721.62328 0.49289001 1.34488745 1.201575674 1.073678735 1.257470543 1.345300371 1.229720391 0.949562888 1.232047125 1 13.51688476 -4.753346956 24.99999304 1.186251197 0.492888743 0.72340366 0.127726092 159.8845373 493893.9191 0.032030465 0.348428068 1.76E-05 4.753346956 -0.693362454 ASSGDQGS(ph)PPCFLR ddPTM_A459_MK2206_30min_R2 1 ASSGDQGSPPCFLR 14 0 A6NN50;O75147-2;O75147-1;O75147-4;O75147 A6NN50 OBSL1 Obscurin-like protein 1 1 ASS(0.008)GDQGS(0.991)PPCFLR 73.758 0.048054 3728100 28926 31116 27707 40122 31559 28124 29466 27469 26781 24102 TRUE FALSE 31140.5968 29570.82469 28630.73755 36843.90426 30319.83509 29194.27853 25597.0788 31059.29262 29110.36297 23315.55371 1.335614722 1.268287472 1.2279673 1.580228577 1.300412397 1.252137474 1.09785421 1.3321276 1.24853835 1 14.50900507 -6.807962821 3.342816622 1.196092496 1.347215636 0.30374391 0.120945476 0.357293689 8.174802144 0.044943284 0.040721108 1.56E-07 6.807962821 0.151123139 ASSHS(ph)SQTQGGGSVTK ddPTM_A459_MK2206_30min_R1 2 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 ASSHS(0.931)S(0.069)QTQGGGSVTK;AS(0.008)S(0.008)HS(0.563)S(0.415)QT(0.005)QGGGSVTK 317.7 2.57E-117 30563700 18251.4 8153.3 9507.2 7243.72 14666.9 17094.4 23379.4 20270.4 82.762 7589.52 TRUE FALSE 16699.02259 7622.518688 8861.877753 7801.63257 14082.68632 18062.27016 21819.80288 20093.17803 91.36540607 8529.767036 1.957734897 0.893637383 1.038935497 0.914636066 1.6510048 2.117557265 2.558077236 2.355653788 0.01071136 1 13.05829062 -6.395253955 5.889820179 1.765455584 1.170588073 0.048727019 0.744776728 0.527196968 23.08987209 0.235679859 0.267113931 4.02E-07 6.395253955 -0.59486751 ASSHS(ph)SQTQGGGSVTK ddPTM_A459_MK2206_30min_R2 6 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.222)S(0.222)HS(0.466)S(0.091)QTQGGGSVTK;ASS(0.027)HS(0.485)S(0.485)QT(0.002)QGGGSVTK;AS(0.014)S(0.106)HS(0.859)S(0.021)QTQGGGSVTK;AS(0.001)S(0.069)HS(0.81)S(0.119)QT(0.001)QGGGSVTK;AS(0.002)S(0.007)HS(0.934)S(0.057)QTQGGGSVTK;AS(0.009)S(0.216)HS(0.38)S(0.38)QT(0.014)QGGGSVTK 260.56 3.80E-94 885809000 370297.2 1308370.2 764650.4 2249782 1930686 3041239.6 2255617 1691246.2 2810586 1332730.2 TRUE FALSE 398647.4383 1243398.438 790143.4627 2065967.614 1854877.567 3156976.104 1959451.778 1912297.885 3055045.69 1289243.323 0.309210396 0.964440472 0.612873806 1.602465243 1.438733507 2.448704638 1.519846366 1.483271506 2.369642438 1 20.29809314 -5.810990059 3.813913277 1.745004737 0.649317201 0.558003225 0.433750905 0.158570623 4.735439653 0.120043296 0.194023837 1.55E-06 5.810990059 -1.095687536 ASSHSS(ph)QTQGGGSVTK ddPTM_A459_MK2206_30min_R1 6 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.012)S(0.127)HS(0.156)S(0.705)QTQGGGSVTK;AS(0.001)S(0.009)HS(0.088)S(0.901)QT(0.001)QGGGSVTK;ASS(0.006)HS(0.071)S(0.918)QT(0.006)QGGGSVTK;ASS(0.013)HS(0.046)S(0.941)QTQGGGSVTK;ASSHS(0.002)S(0.988)QT(0.01)QGGGSVTK;ASSHS(0.066)S(0.934)QTQGGGSVTK 334.51 5.62E-135 326261000 71131.9 34096.48 33877.96 27989.66 55754.5 65429.9 93029.2 81618.5 1543.159 28060.25 TRUE FALSE 65081.75838 31876.79295 31578.41846 30145.42846 53533.6802 69134.48439 86823.39181 80904.91806 1703.5759 31536.56561 2.063692007 1.010788345 1.001327121 0.955888121 1.697511418 2.192200801 2.753102315 2.56543211 0.054019069 1 14.94473794 -6.43929324 5.628313704 1.883161564 1.226506802 0.051195416 0.794780103 0.496609508 25.74907766 0.252847789 0.285136259 3.64E-07 6.43929324 -0.656654761 ASSHSS(ph)QTQGGGSVTK ddPTM_A459_MK2206_30min_R2 3 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 ASSHS(0.087)S(0.913)QTQGGGSVTK;ASSHS(0.374)S(0.626)QTQGGGSVTK;AS(0.169)S(0.169)HS(0.169)S(0.481)QT(0.012)QGGGSVTK 243.9 2.82E-78 113346000 75962.1 166081 109194.8 242808 219811 290257 230710 178424.6 247671 148408.3 TRUE FALSE 81777.81678 157833.659 112835.3001 222969.8097 211180.1157 301302.9335 200417.4999 201745.3078 269212.9759 143565.7493 0.569619266 1.099382407 0.785948603 1.553084985 1.470964465 2.098710416 1.395998007 1.405246786 1.875189432 1 17.13135208 -5.765392506 24.5967862 1.573687697 0.846423222 0.545445428 0.301804279 57.82293431 359784.9353 0.081005896 0.12542093 1.72E-06 5.765392506 -0.727264475 ASSHSSQT(ph)QGGGSVTK ddPTM_A459_MK2206_30min_R2 1 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 ASSHS(0.002)S(0.023)QT(0.967)QGGGS(0.005)VT(0.003)K 88.176 0.034909 0 2234.6 3003.5 2943 6857.1 6557.5 8718.3 4972.9 4517 5902.9 2338.4 TRUE FALSE 2405.682694 2854.350557 3041.118151 6296.852995 6300.019601 9050.081016 4319.952256 5107.387409 6416.323572 2262.0982 1.063474032 1.261815494 1.344379369 2.783633795 2.785033648 4.000746306 1.909710311 2.257809767 2.836447849 1 11.14344584 -5.727270692 6.592936472 2.61191073 1.212870921 0.391920383 0.727549901 0.17464539 22.09024767 0.196880362 0.336184409 1.87E-06 5.727270692 -1.399039809 ASSHSSQTQGGGS(ph)VTK ddPTM_A459_MK2206_30min_R1 1 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 ASSHSSQT(0.268)QGGGS(0.728)VT(0.004)K 217.35 1.27E-10 2691100 931.09 338.97 217.87 359.49 538.4 563.64 900.51 640.64 35.644 164.59 TRUE FALSE 851.8959062 316.9029914 203.0815914 387.1779821 516.9543879 595.5528097 840.438621 635.038952 39.34932135 184.9806518 4.605324383 1.713168314 1.097853151 2.093072861 2.79464032 3.219541092 4.543386634 3.433002024 0.212721282 1 7.531230568 -6.272014547 21.47623074 2.790290421 2.238519848 0 1.439435153 494.4297683 1004092.333 0.45432368 0.522388258 5.35E-07 6.272014547 -0.551770573 ASSHSSQTQGGGS(ph)VTK ddPTM_A459_MK2206_30min_R2 6 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 ASSHSSQTQGGGS(0.656)VT(0.344)K;ASSHSSQT(0.001)QGGGS(0.887)VT(0.112)K;ASSHSSQT(0.242)QGGGS(0.706)VT(0.052)K;ASSHSSQT(0.001)QGGGS(0.892)VT(0.107)K;ASSHSSQT(0.002)QGGGS(0.957)VT(0.041)K;ASSHSSQT(0.013)QGGGS(0.921)VT(0.066)K 116.27 0.0012792 35667100 32141.17 83837.6 53431.6 157017.8 182813.5 227661 114629.3 101836.1 173309.7 50398.5 TRUE FALSE 34601.92269 79674.3467 55212.98288 144188.9435 175635.3234 236324.7989 99578.33522 115146.4279 188383.8644 48754.00107 0.70972478 1.634211448 1.132481061 2.957479187 3.602480198 4.847290349 2.042464885 2.361784169 3.86396727 1 15.573233 -5.776913874 6.748793 3.083757227 1.200792199 0.390349553 1.018825048 0.146891105 28.22006891 0.285011871 0.445842865 1.67E-06 5.776913874 -1.882965028 ASSLSESS(ph)PPK ddPTM_A459_MK2206_30min_R2 1 ASSLSESSPPK 11 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VRN8;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 ASSLS(0.003)ES(0.06)S(0.936)PPK 84.188 0.045259 0 115350 133990 136500 113180 133530 94483 142220 100610 113670 164030 TRUE FALSE 124181.2847 127336.2514 141050.8419 103932.832 128286.9413 98078.61677 123546.3432 113760.0724 123556.8111 158677.7145 0.782600664 0.802483523 0.888914 0.65499325 0.808474849 0.618099505 0.77859921 0.716925327 0.77866518 1 17.27574 -8.575184489 19.01754946 1.000000001 0.756263298 0.491755923 0.073853535 1266.097268 460333.7798 0.070736493 0.018264084 2.66E-09 8.575184489 -0.243736703 ASSNKDFT(ph)PNR ddPTM_A459_MK2206_30min_R1 1 ASSNKDFTPNR 11 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2;Q7Z6E9-4 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 ASSNKDFT(1)PNR 159.58 0.0060944 19404000 4082 4339.1 4000.4 4154.8 4288.4 3647.9 4077 4126.5 2681.9 2344.4 TRUE FALSE 3734.804465 4056.623801 3728.863994 4474.803416 4117.583947 3854.440946 3805.030769 4090.422446 2960.693102 2634.841971 1.417468108 1.539608009 1.415213525 1.698319468 1.562744177 1.46287367 1.444121056 1.552435588 1.123670085 1 11.36350072 -8.360233686 3.676918388 1.00718631 1.514101632 0.829575857 0.082183882 0.088190823 2.060831416 0.079528626 0.021260666 4.36E-09 8.360233686 0.506915322 ASSPAES(ph)SPEDSGYMR ddPTM_A459_MK2206_30min_R1 2 ASSPAESSPEDSGYMR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 ASS(0.002)PAES(0.499)S(0.499)PEDSGYMR;ASS(0.003)PAES(0.772)S(0.225)PEDSGYMR 288.06 1.70E-74 14514600 4352.9 3471.6 4115.3 3408.7 4717.7 4878.6 4656.6 3569.69 2958.25 2579.48 TRUE FALSE 3982.662997 3245.598209 3835.964902 3671.238665 4529.784019 5154.822116 4345.96671 3538.480577 3265.770674 2899.045456 1.373784253 1.119540296 1.323182047 1.266361194 1.562508794 1.778110138 1.499102645 1.220567469 1.126498609 1 11.50136224 -8.076966917 2.643226776 1.053799974 1.414459484 0.41281096 0.170652649 0.342244968 4.376673873 0.162688156 0.053359188 8.38E-09 8.076966917 0.360659511 ASSPAES(ph)SPEDSGYMR ddPTM_A459_MK2206_30min_R2 1 ASSPAESSPEDSGYMR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 AS(0.005)S(0.032)PAES(0.886)S(0.077)PEDSGYMR 250.46 2.00E-29 6664100 15843 21341 18999 24551 20330 24291 22208 15898 16985 16832 TRUE FALSE 17055.95226 20281.23697 19632.41718 22545.10477 19531.74205 25215.41103 19292.06292 17975.92319 18462.3246 16282.77322 1.047484481 1.245564051 1.205717043 1.384598585 1.19953412 1.548594376 1.184814323 1.103984128 1.133856276 1 13.99105881 -7.520711153 18.56786813 1.100229507 1.27763729 0.312052907 0.127012168 4.179639617 35844.32608 0.058616237 0.034956472 3.02E-08 7.520711153 0.177407783 ASSPAESS(ph)PEDSGYMR ddPTM_A459_MK2206_30min_R2 2 ASSPAESSPEDSGYMR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 AS(0.001)S(0.176)PAES(0.173)S(0.649)PEDSGYMR;AS(0.002)S(0.044)PAES(0.155)S(0.795)PEDS(0.003)GYMR 166.52 1.24E-05 6417400 35707 48275 32640.1 43538 39738 43558 42476 33239 40747 37133 TRUE FALSE 38440.75537 45877.7337 33728.30464 39980.80613 38177.68645 45215.63021 36898.85018 37583.45143 44291.10041 35921.35325 1.070136615 1.277171642 0.938948608 1.113009464 1.062813146 1.258739611 1.027212141 1.046270478 1.233002 1 15.13255408 -10.85609465 3.260372535 0.9992542 1.111943418 0.096734112 0.104444687 23750328.62 34063667.85 172282.7819 0.02466961 1.39E-11 10.85609465 0.112689218 ASSPHGLGSPLVAS(ph)PR ddPTM_A459_MK2206_30min_R1 3 ASSPHGLGSPLVASPR 16 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 ASSPHGLGS(0.011)PLVAS(0.989)PR;ASSPHGLGSPLVAS(1)PR;ASSPHGLGSPLVAS(1)PR 154.47 0.00011292 28244800 7139.7 5364.4 6109 5600.4 7936.8 7930.5 8344.2 7023.9 4330.31 5276.3 TRUE FALSE 6532.431023 5015.176585 5694.338101 6031.743778 7620.66045 8379.518057 7787.573643 6962.490783 4780.461221 5929.967878 1.101596359 0.845734191 0.960264578 1.017162977 1.285109904 1.413079839 1.313257306 1.174119477 0.806152971 1 12.53380857 -6.099592673 5.009410055 1.193000239 0.961181364 0.210668637 0.170883255 0.316336795 12.4361633 0.053628627 0.070632414 7.95E-07 6.099592673 -0.231818875 ASSPHGLGSPLVAS(ph)PR ddPTM_A459_MK2206_30min_R2 2 ASSPHGLGSPLVASPR 16 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 ASSPHGLGSPLVAS(1)PR;ASSPHGLGS(0.001)PLVAS(0.999)PR 132.52 0.00040519 49286000 47850 59917 80990 109438 97663 99052 77357 49596 100863 75505 TRUE FALSE 51513.43279 56941.60891 83690.16618 100496.5653 93828.2599 102821.4933 67199.93298 56078.36749 109635.8814 73041.27803 0.705264669 0.779581224 1.145792741 1.37588728 1.284592253 1.407717609 0.920026796 0.767762682 1.501012638 1 16.15642439 -5.246533154 4.195959501 1.179443643 0.726820951 0.389319968 0.217939142 0.215228617 9.329433275 0.059724175 0.158938746 5.67E-06 5.246533154 -0.452622692 ASSPS(ph)PLTIGTPESQR ddPTM_A459_MK2206_30min_R1 4 ASSPSPLTIGTPESQR 16 0 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 ASS(0.005)PS(0.995)PLTIGTPESQR;ASS(0.008)PS(0.992)PLTIGTPESQR;AS(0.063)S(0.277)PS(0.514)PLT(0.118)IGT(0.028)PES(0.001)QR;AS(0.002)S(0.096)PS(0.857)PLT(0.045)IGTPESQR 270.74 1.64E-50 121777800 8013.1 8307.7 8019 6768.8 7694.5 7137.7 8852.7 6865.9 7643.9 8229.3 TRUE FALSE 7331.543767 7766.86722 7474.692622 7290.134149 7388.011772 7541.830406 8262.152536 6805.87216 8438.510759 9248.807812 0.792701494 0.839769555 0.80817904 0.788224201 0.79880693 0.815438115 0.893320815 0.735864805 0.912389027 1 13.1750517 -8.512163498 5.733492134 0.99990505 0.812335044 0.727521724 0.037906527 0.064849391 9.402774303 0.034744442 0.00901253 3.07E-09 8.512163498 -0.187570005 ASSPS(ph)PLTIGTPESQR ddPTM_A459_MK2206_30min_R2 3 ASSPSPLTIGTPESQR 16 0 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 AS(0.013)S(0.013)PS(0.961)PLT(0.009)IGT(0.004)PESQR;AS(0.007)S(0.133)PS(0.85)PLT(0.01)IGTPESQR;ASS(0.002)PS(0.997)PLT(0.001)IGTPESQR 171.15 8.45E-06 142288000 105979 99280 94819 104881 99943 99741 119304 90871 89944 118812 TRUE FALSE 114092.8337 94349.89957 97980.21814 96311.8868 96018.73565 103536.7136 103639.2415 102748.1517 97767.16654 114935.1742 0.992671169 0.820896651 0.852482444 0.837967032 0.835416454 0.900827048 0.901719097 0.89396612 0.850628776 1 16.81046085 -6.843870743 10.12958495 0.902450682 0.862782708 0.108543876 0.056896196 0.894262904 102.9741714 0.019419798 0.017132616 1.43E-07 6.843870743 -0.039667974 ASSPS(ph)PLTIGTPESQRK ddPTM_A459_MK2206_30min_R2 1 ASSPSPLTIGTPESQRK 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 AS(0.023)S(0.28)PS(0.696)PLT(0.001)IGTPESQRK 71.592 0.015065 8468900 17693 19484 23711 18953 22220 20368 23833 16696 17991 22240 TRUE FALSE 19047.58968 18516.45289 24501.51291 17404.47927 21347.53115 21143.11851 20703.69847 18878.22453 19555.82466 21514.31062 0.885345109 0.860657505 1.138847223 0.808972204 0.992247975 0.982746735 0.962322188 0.8774729 0.908968221 1 14.39300899 ASSSGPRS(ph)PLDQR ddPTM_A459_MK2206_30min_R1 1 ASSSGPRSPLDQR 13 1 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 ASSS(0.016)GPRS(0.984)PLDQR 156.2 0.0017341 14434000 3442.3 3006.4 3502.5 2971.4 3466.9 2893.3 3267.4 3448.1 2474.6 2130.8 TRUE FALSE 3149.514309 2810.682814 3264.760059 3200.257743 3328.806032 3057.116146 3049.437708 3417.953625 2731.843525 2394.779591 1.315158322 1.173670773 1.363282062 1.33634751 1.390026057 1.276575163 1.273368839 1.42725186 1.14074946 1 11.22567716 -8.50232515 5.001750945 1.00040851 1.315294885 0.71022301 0.066632078 0.082310588 6.47714933 0.064610555 0.016809133 3.15E-09 8.50232515 0.314886375 ASSSGPRS(ph)PLDQR ddPTM_A459_MK2206_30min_R2 2 ASSSGPRSPLDQR 13 1 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 ASSS(0.099)GPRS(0.9)PLDQR;AS(0.001)S(0.006)S(0.028)GPRS(0.965)PLDQR 132.24 0.0068492 40030000 23146 36701 27399 37269 35254 33091 33444 23602 31484 26708 TRUE FALSE 24918.07556 34878.48171 28312.46899 34224.00348 33869.75082 34350.30119 29052.76263 26686.86244 34222.42141 25836.52015 0.964451691 1.349968243 1.095831359 1.324636727 1.310925412 1.329525068 1.124484352 1.032912416 1.324575493 1 14.65712415 -11.16469465 2.650431009 0.976415436 1.21000635 0.173252383 0.13503119 69624384.24 60064899.9 11195551.68 0.034817826 6.84E-12 11.16469465 0.233590913 ASSSKES(ph)PSPSVR ddPTM_A459_MK2206_30min_R2 2 ASSSKESPSPSVR 13 1 H0Y517;H7C1U3;Q5T0F9-3;Q5T0F9-2;Q5T0F9 H0Y517 CC2D1B Coiled-coil and C2 domain-containing protein 1B 1 AS(0.02)S(0.311)S(0.1)KES(0.467)PS(0.096)PS(0.004)VR;AS(0.004)S(0.119)S(0.133)KES(0.719)PS(0.025)PSVR 147.83 0.0026716 5807400 18868.5 19746.8 15926.6 19830.8 19791.4 18671.6 21945 18453.2 18143.7 17349.9 TRUE FALSE 20313.08687 18766.20263 16457.58489 18210.5602 19014.29019 19382.16082 19063.59514 20865.0966 19721.80623 16783.77418 1.21028123 1.118115772 0.9805652 1.085009844 1.132897165 1.154815395 1.135834821 1.243170718 1.175051929 1 14.03477955 -6.45920232 3.431033357 1.156087159 1.091931009 0.048145726 0.077391404 0.55321149 12.80916636 0.026048563 0.028850073 3.47E-07 6.45920232 -0.06415615 ASSTPSSET(ph)QEEFVDDFR ddPTM_A459_MK2206_30min_R2 1 ASSTPSSETQEEFVDDFR 18 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H367;F5H270 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 ASST(0.004)PS(0.024)S(0.173)ET(0.799)QEEFVDDFR 97.957 0.0079256 2121600 7579.2 9098.1 10168 13026 9299.7 12541 11581 9195.2 11454 9582.3 TRUE FALSE 8159.469379 8646.301584 10506.99605 11961.73413 8934.547051 13018.25654 10060.40079 10397.04421 12450.24822 9269.630336 0.880236761 0.932755813 1.133485982 1.290421915 0.963851494 1.404398673 1.085307658 1.12162447 1.343122408 1 13.17829609 -5.260000196 3.439062109 1.177415275 0.892780795 0.380606473 0.134537409 0.222816669 5.622519335 0.033611909 0.093291155 5.50E-06 5.260000196 -0.28463448 ASSTST(ph)PEPTR ddPTM_A459_MK2206_30min_R1 3 ASSTSTPEPTR 11 0 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6 ENAH Protein enabled homolog 1 ASST(0.001)S(0.019)T(0.979)PEPTR;ASS(0.004)T(0.031)S(0.031)T(0.934)PEPTR;ASST(0.004)S(0.031)T(0.965)PEPTR 203.03 4.25E-05 142884380 16163.89 14046.55 13722.13 12733.91 16435.98 13002.24 17477.3 15435.04 10199.96 13186.24 TRUE FALSE 14789.06628 13132.11704 12790.71005 13714.67795 15781.30011 13738.41559 16311.42121 15300.09307 11260.28234 14819.85096 0.99792274 0.886116674 0.863079533 0.925426173 1.064875764 0.927027919 1.100646778 1.032405327 0.759810768 1 13.85524332 -6.02452629 24.00682028 0.986576448 0.909664924 0.095570074 0.093223475 954.7174405 934496.4581 0.027323666 0.035479155 9.45E-07 6.02452629 -0.076911524 ASSTST(ph)PEPTR ddPTM_A459_MK2206_30min_R2 3 ASSTSTPEPTR 11 0 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6 ENAH Protein enabled homolog 1 ASST(0.007)S(0.023)T(0.969)PEPTR;AS(0.006)S(0.058)T(0.01)S(0.058)T(0.867)PEPT(0.001)R;ASST(0.003)S(0.025)T(0.972)PEPTR 163.46 0.0014935 340745200 181272.7 203556 188317 238521 219218 212112 219514 167423 221759 231280 TRUE FALSE 195151.0773 193447.705 194595.3948 219033.0713 210610.3998 220184.0708 190691.5481 189305.7609 241047.197 223733.3525 0.872248483 0.864635079 0.869764801 0.978991593 0.941345568 0.984136108 0.852316143 0.84612222 1.077386068 1 17.77142081 -1.522878746 0.093016896 1.048719285 0.543109488 0.251421721 0.064960405 246.9581385 1.651035493 1.12615197 15.92092225 0.03 1.522878746 -0.505609797 ASSVGVLS(ph)PQK ddPTM_A459_MK2206_30min_R2 1 ASSVGVLSPQK 11 0 Q9UGU5 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 ASSVGVLS(0.999)PQK 86.803 0.03295 6655200 20944 19114 21950 20638 26343 16988 24618 20721 16122 22409 TRUE FALSE 22547.48874 18164.82655 22681.80204 18951.80938 25308.64146 17634.49024 21385.62703 23429.30585 17524.26242 21677.79617 1.04011905 0.837946183 1.046314942 0.874249819 1.16749144 0.813481689 0.986522194 1.080797405 0.808396863 1 14.40393047 -7.308689607 0.003454301 1.263934929 0.669112086 0 0.118446581 531340.3592 1150.106204 98515.81108 99513.26454 4.91E-08 7.308689607 -0.594822843 ASSVGVLS(ph)PQKK ddPTM_A459_MK2206_30min_R1 1 ASSVGVLSPQKK 12 1 Q9UGU5 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 AS(0.002)S(0.316)VGVLS(0.682)PQKK 127.71 0.0045865 31354000 3431 3498.9 3310.1 2961.8 2692.4 2593.9 2826.5 2977.5 2628.3 2484.5 TRUE FALSE 3139.175433 3271.120974 3085.419634 3189.918349 2585.156007 2740.764376 2637.949342 2951.468031 2901.52119 2792.298617 1.124226261 1.171479638 1.10497481 1.142398714 0.925816455 0.981544151 0.944723221 1.057003006 1.039115649 1 11.44723752 -6.246308308 24.98764882 0.991393892 1.136120922 0.761976593 0.039538301 414.527824 684556.6514 0.012399979 0.015944199 5.67E-07 6.246308308 0.14472703 ASSVS(ph)TKESPAR ddPTM_A459_MK2206_30min_R2 1 ASSVSTKESPAR 12 1 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4 E7ETY2;Q13428 TCOF1 Treacle protein 1 ASS(0.019)VS(0.685)T(0.056)KES(0.24)PAR 118.76 0.021086 36250000 15028 20662 18940 19713 21964 19410 22097 14500 17718 20653 TRUE FALSE 16178.55523 19635.95513 19571.45015 18102.38484 21101.583 20148.66115 19195.63736 16395.19979 19259.07961 19979.0943 0.809774207 0.982825089 0.979596465 0.90606634 1.056183162 1.008487214 0.960786163 0.820617769 0.963961595 1 14.28620356 -4.756516254 24.99216884 0.961478395 0.809773973 0.370618704 0.060303851 182.1057312 924349.8458 0.015862801 0.127482476 1.75E-05 4.756516254 -0.151704421 ASSVSTKES(ph)PAR ddPTM_A459_MK2206_30min_R1 5 ASSVSTKESPAR 12 1 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4 E7ETY2;Q13428 TCOF1 Treacle protein 1 ASSVS(0.002)T(0.001)KES(0.997)PAR;ASSVST(0.001)KES(0.999)PAR;ASSVS(0.001)T(0.012)KES(0.987)PAR;ASSVS(0.007)T(0.014)KES(0.979)PAR;ASS(0.012)VS(0.003)T(0.016)KES(0.968)PAR 255.39 1.70E-18 375249100 17411.2 18073.9 17350.2 15337.1 16466.8 13486.2 15861.4 16246 8855.08 12518.6 TRUE FALSE 15930.28601 16897.28582 16172.51676 16518.3661 15810.89249 14249.77699 14803.31495 16103.96293 9775.597254 14069.49868 1.132256833 1.200987058 1.149473562 1.174055059 1.12377085 1.012813414 1.052156533 1.144601048 0.694807788 1 13.7802833 -7.477004764 0.780779549 0.906059165 1.165912818 0.459047367 0.102934807 0.595748912 0.686251203 0.086278585 0.045803033 3.33E-08 7.477004764 0.259853653 ASSVSTKES(ph)PAR ddPTM_A459_MK2206_30min_R2 3 ASSVSTKESPAR 12 1 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4 E7ETY2;Q13428 TCOF1 Treacle protein 1 ASSVS(0.001)T(0.002)KES(0.997)PAR;ASS(0.001)VS(0.056)T(0.117)KES(0.827)PAR;ASSVS(0.012)T(0.026)KES(0.962)PAR 157.37 0.0020559 161626000 68001 72363 65960.3 73620 72656 60906.9 79337.8 58146.9 59940.2 68556 TRUE FALSE 73207.20884 68769.55865 68159.38348 67605.0105 69803.16037 63224.75476 68920.65156 65746.89948 65153.69025 66319.02333 1.103864399 1.036950715 1.027750109 1.019390924 1.052536012 0.95334267 1.039228989 0.991373156 0.982428374 1 16.01713514 -1.522878745 0.475957664 0.998304188 3.62489355 0.574574161 0.025990994 71.37133203 0.808145726 0.014736441 185.0456206 0.03 1.522878745 2.626589362 AST(ph)PDWVSEGPQPGLR ddPTM_A459_MK2206_30min_R1 4 ASTPDWVSEGPQPGLR 16 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 AST(1)PDWVSEGPQPGLR;AS(0.004)T(0.996)PDWVSEGPQPGLR;AS(0.145)T(0.855)PDWVSEGPQPGLR;AS(0.008)T(0.992)PDWVSEGPQPGLR 268.9 5.04E-50 326965900 6237.42 6667.27 6613.87 5226.78 6172.88 5784.13 8244.9 6854.84 6736.67 6196.11 TRUE FALSE 5706.894675 6233.229511 6164.938932 5629.347501 5927.001118 6111.622442 7694.897765 6794.908857 7436.970954 6963.730885 0.819516832 0.895099138 0.88529253 0.808380966 0.851124378 0.877636219 1.10499643 0.975756957 1.067957834 1 12.76564474 -7.163297282 5.944093504 1.034577109 0.8551034 0.823434528 0.041129407 0.092027625 4.594340101 0.015305351 0.011799991 6.87E-08 7.163297282 -0.179473709 AST(ph)PDWVSEGPQPGLR ddPTM_A459_MK2206_30min_R2 3 ASTPDWVSEGPQPGLR 16 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 AS(0.013)T(0.987)PDWVSEGPQPGLR;AS(0.034)T(0.966)PDWVSEGPQPGLR;AS(0.004)T(0.996)PDWVSEGPQPGLR 164.7 5.30E-05 372088000 99764 94883 102387 138776 124929 127517 144036 113052 133801 135975 TRUE FALSE 107402.0085 90171.24819 105800.5315 127437.5569 120023.6597 132369.7488 125123.9002 127828.2846 145438.7691 131538.1469 0.816508451 0.685514053 0.80433345 0.968825849 0.912462754 1.006322135 0.951236604 0.971796301 1.105677498 1 17.00512173 -5.712010575 3.004640309 0.985833606 0.747854017 0.770621581 0.055326488 0.113411486 2.076546199 0.01572892 0.028640799 1.94E-06 5.712010575 -0.237979588 AST(ph)PDWVSEGPQPGLRR ddPTM_A459_MK2206_30min_R1 1 ASTPDWVSEGPQPGLRR 17 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 AST(0.999)PDWVS(0.001)EGPQPGLRR 184.87 7.64E-06 8399300 2480.8 2258.4 2473.2 2617.9 2799.9 2571.9 2146.1 3173.2 1559.2 1199.1 TRUE FALSE 2269.794933 2111.37775 2305.326075 2819.531112 2688.374054 2717.518755 2002.937585 3145.457047 1721.28442 1347.653561 1.684256992 1.566706616 1.710622182 2.092177985 1.994855453 2.016481709 1.48624071 2.334024959 1.27724548 1 10.39623396 -8.476455146 6.860269611 1.000521885 1.849742129 0.591529131 0.245273651 0.132001542 15.28168126 0.235215666 0.060871139 3.34E-09 8.476455146 0.849220245 AST(ph)PVLK ddPTM_A459_MK2206_30min_R1 2 ASTPVLK 7 0 A0A669KBK8;Q04724;F6T2C8;A0A669KAE5 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 AS(0.003)T(0.997)PVLK;AS(0.003)T(0.997)PVLK 147.29 0.0069828 16650600 27936 25632 24087 21182.7 23688 18630.4 20496.9 19284.8 16249.4 17740.6 TRUE FALSE 25559.8965 23963.35214 22452.04155 22814.19522 22744.4568 19685.23715 19129.5892 19116.19503 17938.58328 19938.43946 1.281940673 1.201866986 1.126068146 1.144231737 1.14073405 0.987300796 0.959432619 0.958760843 0.89969846 1 14.28326488 -6.445013837 0.724364429 0.932274721 1.238774777 0.86903604 0.04301861 0.250947764 0.291849824 0.028587596 0.040880034 3.59E-07 6.445013837 0.306500056 AST(ph)PYIEK ddPTM_A459_MK2206_30min_R1 2 ASTPYIEK 8 0 C9J618;C9J5A2;C9J347;C9J7P5;C9IZN7;Q969Z0-2;Q969Z0 C9J618 TBRG4 Protein TBRG4 1 AS(0.004)T(0.996)PYIEK;AS(0.056)T(0.944)PYIEK 167.12 0.00056039 47486000 22558 23295 22158 20945.5 22985 21530 23271 21209.3 19915.2 19665.9 TRUE FALSE 20639.32364 21778.49127 20653.9767 22558.72604 22069.45878 22749.00999 21718.63405 21023.86933 21985.45631 22102.26016 0.933810547 0.985351322 0.934473513 1.020652452 0.998515926 1.029261706 0.982643127 0.951209024 0.994715298 1 14.43190629 -5.757192882 24.99999849 0.995525933 0.954625747 0.429640461 0.023900761 119.1062361 701192.1961 0.006879017 0.011389285 1.75E-06 5.757192882 -0.040900185 AST(ph)PYIEK ddPTM_A459_MK2206_30min_R2 1 ASTPYIEK 8 0 C9J618;C9J5A2;C9J347;C9J7P5;C9IZN7;Q969Z0-2;Q969Z0 C9J618 TBRG4 Protein TBRG4 1 AS(0.001)T(0.999)PYIEK 154.01 0.0018201 8493400 113610 133410 125280 141480 131190 119370 142190 110750 145760 131330 TRUE FALSE 122308.069 126785.0534 129456.7727 129920.6314 126038.8214 123912.709 123520.2822 125225.4053 158437.9413 127044.7129 0.962716718 0.997956157 1.018985913 1.022637058 0.992082383 0.975347232 0.972258345 0.985679785 1.247103778 1 16.95497681 -8.211855282 24.99905714 1.123552152 0.992075222 0.454145493 0.058136307 259.5882994 130878.2353 0.035777172 0.013522438 6.14E-09 8.211855282 -0.13147693 ASTAPGAEAS(ph)PSPCITER ddPTM_A459_MK2206_30min_R1 4 ASTAPGAEASPSPCITER 18 0 Q66PJ3 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 ASTAPGAEAS(0.87)PS(0.129)PCITER;AST(0.006)APGAEAS(0.994)PSPCITER;ASTAPGAEAS(0.996)PS(0.004)PCITER;AS(0.002)T(0.045)APGAEAS(0.953)PSPCITER 250.38 5.81E-33 35868300 10421.9 8865.3 9637.7 8440.6 10266.3 8914.86 9841.9 9038.5 8925.5 8945.2 TRUE FALSE 9535.462677 8288.167359 8983.519776 9090.696474 9857.371532 9419.611669 9185.364809 8959.477347 9853.337665 10053.39891 0.94848148 0.824414453 0.893580356 0.904241099 0.980501383 0.936957914 0.913657649 0.891188883 0.980100139 1 13.29539572 ASTAPGAEAS(ph)PSPCITER ddPTM_A459_MK2206_30min_R2 3 ASTAPGAEASPSPCITER 18 0 Q66PJ3 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 ASTAPGAEAS(0.846)PS(0.154)PCITER;ASTAPGAEAS(1)PSPCITER;ASTAPGAEAS(0.9)PS(0.1)PCITER 270.94 4.74E-54 54186400 69081 85995 72188 91291 80213 77967 86517 70192 68670 75472 TRUE FALSE 74369.89447 81724.61335 74594.71189 83832.23327 77063.43458 80934.08882 75157.21397 79366.33541 74642.79247 73009.35482 1.018635141 1.119371806 1.021714437 1.148239612 1.055528223 1.10854409 1.029418958 1.087070768 1.022372991 1 16.15579371 -8.408690604 3.611601243 1.000439277 1.074959432 0.271878965 0.04139741 0.269372475 6.081785301 0.036171808 0.009586164 3.90E-09 8.408690604 0.074520155 ASTAS(ph)PCNNNINAATAVALQEPR ddPTM_A459_MK2206_30min_R1 2 ASTASPCNNNINAATAVALQEPR 23 0 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4 Q71RC2-6 LARP4 La-related protein 4 1 AS(0.019)T(0.061)AS(0.92)PCNNNINAATAVALQEPR;AS(0.086)T(0.086)AS(0.828)PCNNNINAATAVALQEPR 112.88 8.53E-06 83177000 4227.5 3963.9 4546.2 3897.7 4231.1 3887.2 4008.1 3754.2 3546.4 3353.6 TRUE FALSE 3867.928926 3705.84939 4237.61661 4197.901529 4062.566327 4107.289905 3740.726962 3721.377425 3915.060971 3769.069286 1.026229191 0.983226656 1.1243138 1.113776694 1.077869898 1.089735845 0.992480286 0.987346515 1.038734147 1 11.8799926 -7.265862293 24.94685403 1.003585777 1.070211059 0.378537848 0.040498086 448.7426651 2531066.695 0.018228967 0.012787319 5.42E-08 7.265862293 0.066625282 ASTAS(ph)PCNNNINAATAVALQEPR ddPTM_A459_MK2206_30min_R2 4 ASTASPCNNNINAATAVALQEPR 23 0 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4 Q71RC2-6 LARP4 La-related protein 4 1 AS(0.023)T(0.077)AS(0.9)PCNNNINAATAVALQEPR;AS(0.019)T(0.06)AS(0.921)PCNNNINAATAVALQEPR;AS(0.008)T(0.04)AS(0.952)PCNNNINAATAVALQEPR;AS(0.011)T(0.048)AS(0.94)PCNNNINAATAVALQEPR 129.29 5.54E-06 95981000 175440 186748 183274 192073 223107 212601 217658 163450 198755 208272 TRUE FALSE 188871.8213 177474.3659 189384.2637 176380.0215 214346.6982 220691.68 189079.2431 184813.4762 216042.3506 201476.1017 0.93744032 0.880870557 0.93998376 0.875438923 1.063881504 1.095373983 0.938469831 0.917297261 1.072297651 1 17.6202492 -6.25454809 24.98590217 1.010655089 0.908718213 0.460668012 0.056156546 563.7154557 2043875.508 0.017790436 0.022445371 5.56E-07 6.25454809 -0.101936876 ASTNS(ph)ETNRGESEK ddPTM_A459_MK2206_30min_R1 2 ASTNSETNRGESEK 14 1 J3QKN5;J3KS94;J3QQK6;P02686-2;P02686 J3QKN5 MBP Myelin basic protein 1 AST(0.002)NS(0.998)ETNRGESEK;ASTNS(1)ETNRGESEK 185.14 0.00037493 12674000 4957.8 5715.2 6310.7 5139 5199.3 4804.8 4999 5426.4 2942.5 4473 TRUE FALSE 4536.113076 5343.139441 5882.347267 5534.80667 4992.200871 5076.843624 4665.525831 5378.957557 3248.383405 5027.149009 0.902323179 1.062856786 1.170115956 1.100983213 0.99304812 1.009885248 0.928065952 1.069981723 0.646168116 1 12.29552474 -7.544330963 1.09473826 0.870140138 1.056030475 0.244397254 0.11876852 0.718078971 1.592507559 0.092912312 0.042318785 2.86E-08 7.544330963 0.185890337 ASTNS(ph)ETNRGESEK ddPTM_A459_MK2206_30min_R2 1 ASTNSETNRGESEK 14 1 J3QKN5;J3KS94;J3QQK6;P02686-2;P02686 J3QKN5 MBP Myelin basic protein 1 AST(0.001)NS(0.999)ETNRGESEK 125.86 0.0063844 5178000 6757.2 7783.3 6446.7 8094 8771.9 6580.2 10376 5487.3 7073.7 7582 TRUE FALSE 7274.536427 7396.79264 6661.62976 7432.694309 8427.471131 6830.614122 9013.618736 6204.508951 7688.95764 7334.599961 0.991810933 1.008479355 0.908247184 1.013374192 1.149002151 0.931286527 1.228917567 0.845923293 1.048313157 1 12.84050257 -5.988605733 24.65351428 1.035401449 0.971309415 0.073477659 0.102124548 523.5108383 1132695.71 0.027610137 0.040915885 1.03E-06 5.988605733 -0.064092034 ASTSDYQVISDRQT(ph)PK ddPTM_A459_MK2206_30min_R1 1 ASTSDYQVISDRQTPK 16 1 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 ASTSDYQVIS(0.005)DRQT(0.995)PK 80.733 0.03139 29383000 4727.1 4349.9 4709.4 4055.3 3175.9 2970.7 3676.1 3643.3 3777.4 3198 TRUE FALSE 4325.035322 4066.720719 4389.739049 4367.639909 3049.397178 3138.898467 3430.874076 3611.447012 4170.074248 3594.192384 1.203339961 1.131469962 1.22134226 1.215193691 0.848423471 0.873325112 0.954560499 1.004800697 1.160225665 1 11.81145192 -6.245483409 24.72551422 0.967834631 1.190489295 0.628809509 0.082458073 501.3923419 776961.7218 0.026379157 0.033940162 5.68E-07 6.245483409 0.222654664 ASTSDYQVISDRQT(ph)PK ddPTM_A459_MK2206_30min_R2 1 ASTSDYQVISDRQTPK 16 1 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 ASTSDYQVIS(0.002)DRQT(0.998)PK 76.118 0.041264 23839000 40560 39733 46104 39280 35901 32355 47738 35876 30131 41691 TRUE FALSE 43665.30479 37759.917 47641.08435 36070.69835 34491.34635 33586.2922 41469.94326 40565.11638 32751.73992 40330.62608 1.082683534 0.936259133 1.181263198 0.894374867 0.855214751 0.832773886 1.028249429 1.005814199 0.812081118 1 15.29958818 -5.796708095 24.99667286 0.916982315 1.053687928 0.36219546 0.089716683 199.9682676 141726.5096 0.025461197 0.037766771 1.60E-06 5.796708095 0.136705614 ASTSSSSSSSSNQQTEKET(ph)NTPK ddPTM_A459_MK2206_30min_R1 2 ASTSSSSSSSSNQQTEKETNTPK 23 1 C9J2P0;P51965-3;P51965 C9J2P0 UBE2E1 Ubiquitin-conjugating enzyme E2 E1 1 ASTSSSS(0.004)S(0.061)S(0.212)S(0.212)S(0.048)NQQT(0.067)EKET(0.286)NT(0.11)PK;ASTSSSSSSSSNQQT(0.001)EKET(0.502)NT(0.496)PK 88.57 0.00028889 28162000 3480.5 3264.2 3884.2 3662.3 2716.4 2021.62 2153.21 3133.94 2625.6 1802.85 TRUE FALSE 3184.465198 3051.699987 3620.551326 3944.370981 2608.200036 2136.082377 2009.57329 3106.540293 2898.540516 2026.200669 1.571643543 1.506119327 1.786867106 1.946683288 1.287236786 1.054230418 0.991793814 1.533184911 1.430529839 1 10.98456135 -6.391353086 6.459376068 1.21717283 1.69305951 0.592435899 0.198384921 0.194732997 9.396281413 0.067284337 0.07626566 4.06E-07 6.391353086 0.475886679 ASTSSSSSSSSNQQTEKET(ph)NTPK ddPTM_A459_MK2206_30min_R2 1 ASTSSSSSSSSNQQTEKETNTPK 23 1 C9J2P0;P51965-3;P51965 C9J2P0 UBE2E1 Ubiquitin-conjugating enzyme E2 E1 1 ASTSSSSSSSSNQQT(0.017)EKET(0.491)NT(0.491)PK 76.678 0.0011434 15229000 8917.3 12858 10622 9611.1 13831 8456.3 14451 8821.7 10828 10190 TRUE FALSE 9600.015344 12219.49042 10976.13218 8825.842386 13287.92544 8778.110422 12553.56634 9974.726479 11769.79987 9857.501135 0.973879203 1.239613392 1.113480184 0.895342771 1.348001412 0.890500574 1.273503921 1.011891994 1.19399427 1 13.26700626 -5.535563576 24.98096933 1.091247177 1.124196525 0.001207353 0.154568626 1734.72105 3416276.842 0.038883457 0.067402096 2.91E-06 5.535563576 0.032949348 ASTSSSSSSSSNQQTEKETNT(ph)PK ddPTM_A459_MK2206_30min_R1 2 ASTSSSSSSSSNQQTEKETNTPK 23 1 C9J2P0;P51965-3;P51965 C9J2P0 UBE2E1 Ubiquitin-conjugating enzyme E2 E1 1 ASTSSSSSSSSNQQTEKET(0.055)NT(0.945)PK;ASTSSSSSS(0.007)S(0.007)S(0.002)NQQT(0.009)EKET(0.316)NT(0.66)PK 102.53 4.79E-05 20062500 2394.9 2790.2 2501.1 2508.5 2037.63 1521.14 2009.73 2414.9 1782.38 1507.48 TRUE FALSE 2191.201179 2608.557473 2331.3323 2701.705105 1956.466882 1607.265632 1875.664579 2393.786784 1967.664779 1694.238003 1.29332548 1.539664125 1.376035891 1.594643196 1.154776884 0.948665789 1.107084468 1.412898766 1.161386284 1 10.72642084 -6.284217882 21.1067773 1.141153959 1.451907452 0.561501547 0.138403941 88.12051129 81652.56493 0.044538826 0.050578211 5.20E-07 6.284217882 0.310753493 ASTSSSSSSSSNQQTEKETNT(ph)PK ddPTM_A459_MK2206_30min_R2 3 ASTSSSSSSSSNQQTEKETNTPK 23 1 C9J2P0;P51965-3;P51965 C9J2P0 UBE2E1 Ubiquitin-conjugating enzyme E2 E1 1 ASTSSSSSS(0.001)S(0.001)S(0.001)NQQT(0.002)EKET(0.068)NT(0.928)PK;ASTSSSSSSSSNQQTEKET(0.041)NT(0.959)PK;ASTSSSSSS(0.001)S(0.001)S(0.001)NQQTEKET(0.01)NT(0.988)PK 83.236 0.00051414 25246900 24762.1 34943.4 32455.1 24688.3 39719 20955.8 37602.9 27291.9 32083 37420.4 TRUE FALSE 26657.90541 33208.16157 33537.13684 22671.18692 38159.43249 21753.28765 32665.59406 30859.04504 34873.52135 36199.37541 0.736418933 0.917368358 0.926456229 0.626286687 1.054146157 0.600929917 0.902380046 0.852474516 0.963373565 1 15.14367718 -8.248176912 1.727238507 1.001255522 0.82344454 0.187271268 0.132037258 0.596954194 3.313884975 0.115766454 0.034660777 5.65E-09 8.248176912 -0.177810982 ASTVS(ph)PGGYMVPK ddPTM_A459_MK2206_30min_R1 1 ASTVSPGGYMVPK 13 0 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 AS(0.001)T(0.026)VS(0.973)PGGYMVPK 151.66 0.00045947 9445000 2989.9 3122.4 2736.2 2393.4 2714.3 2587.1 2358.4 2590.1 2204 2403.3 TRUE FALSE 2735.593304 2919.131192 2550.474367 2577.740083 2606.183683 2733.579366 2201.075439 2567.455029 2433.113687 2701.038948 1.012792987 1.080743835 0.94425679 0.954351319 0.964881934 1.012047371 0.814899556 0.950543505 0.900806591 1 11.39929873 -5.384750391 0.80674787 0.92807464 1.069650724 0.294798898 0.057264993 1.478335846 1.303191832 0.024033168 0.161180316 4.12E-06 5.384750391 0.141576084 ASTVS(ph)PGGYMVPK ddPTM_A459_MK2206_30min_R2 4 ASTVSPGGYMVPK 13 0 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 AS(0.037)T(0.015)VS(0.947)PGGYMVPK;AST(0.001)VS(0.999)PGGYMVPK;AST(0.079)VS(0.92)PGGYMVPK;AS(0.005)T(0.035)VS(0.96)PGGYMVPK 155.14 0.00036571 7988700 86897 88655 71183 92907 86264 82519 93479 71458 73462 92235 TRUE FALSE 93549.90113 84252.52162 73556.20569 85316.20091 82876.84192 85659.31837 81205.09501 80797.80595 79851.59197 89225.3795 1.048467394 0.94426633 0.824386583 0.956187593 0.928848298 0.960033108 0.910112072 0.90554735 0.894942587 1 16.44516651 -4.793987687 4.354071003 0.919416607 1.056122611 0.416192273 0.04427273 0.176096733 6.707341378 0.010758126 0.070756016 1.61E-05 4.793987687 0.136706003 ASVALT(ph)PTAPSR ddPTM_A459_MK2206_30min_R1 1 ASVALTPTAPSR 12 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7;H7BZ26 E9PHV5 SSFA2 Sperm-specific antigen 2 1 ASVALT(0.633)PT(0.367)APSR 162.93 0.00116 22361000 2747.4 2588.7 2934.3 2627.1 3198.2 2644.1 3057.4 3271.1 2792.7 2589.8 TRUE FALSE 2513.719203 2420.175159 2735.127891 2829.439697 3070.808922 2793.806657 2853.446425 3242.501118 3083.011159 2910.643976 0.863629913 0.831491306 0.939698539 0.972100924 1.055027323 0.959858602 0.980348833 1.114015024 1.059219604 1 11.50712267 -5.605209497 1.327819929 1.030122199 0.835838257 0.719932094 0.043605964 0.27679337 0.923830417 0.015457117 0.048209744 2.48E-06 5.605209497 -0.194283941 ASVALT(ph)PTAPSR ddPTM_A459_MK2206_30min_R2 2 ASVALTPTAPSR 12 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7;H7BZ26 E9PHV5 SSFA2 Sperm-specific antigen 2 1 AS(0.013)VALT(0.935)PT(0.052)APSR;ASVALT(1)PTAPSR 163.71 0.0011773 71467000 304320 375580 315070 337540 289600 367580 328790 315270 306060 304730 TRUE FALSE 327618.9732 356929.2433 325574.2765 309961.9023 278228.8489 381568.5145 285619.4781 356476.8715 332680.5456 294786.6851 1.111376428 1.210805173 1.104440238 1.051478639 0.943831126 1.294388566 0.968902235 1.2092706 1.128546717 1 18.16931184 -5.452765981 8.964994905 1.090840025 1.160570972 0.074797673 0.10397386 1.153854022 139.6931224 0.026306493 0.054784209 3.53E-06 5.452765981 0.069730947 ASVALTPT(ph)APSR ddPTM_A459_MK2206_30min_R1 1 ASVALTPTAPSR 12 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7;H7BZ26 E9PHV5 SSFA2 Sperm-specific antigen 2 1 AS(0.001)VALT(0.09)PT(0.909)APSR 153.81 0.0010736 22433000 1801 1715.6 1646.3 1192.9 1979.8 1438.9 2209.9 1608.1 1843.4 1782.3 TRUE FALSE 1647.815493 1603.914128 1534.553743 1284.777365 1900.940374 1520.369275 2062.481603 1594.040551 2035.028027 2003.10478 0.822630703 0.800714044 0.766087605 0.64139299 0.948996974 0.759006363 1.029642395 0.795784907 1.015936883 1 10.96802217 -7.167687652 0.841435863 0.969043184 0.769227697 0.406922712 0.096316505 0.652576925 0.92228638 0.071362132 0.045725844 6.80E-08 7.167687652 -0.199815487 ASVALTPTAPS(ph)R ddPTM_A459_MK2206_30min_R1 2 ASVALTPTAPSR 12 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7;H7BZ26 E9PHV5 SSFA2 Sperm-specific antigen 2 1 ASVALTPTAPS(1)R;ASVALTPTAPS(1)R 120.55 0.0040042 24833000 3792.5 3662.1 3817.4 2521.8 3113.7 2752.4 3119.7 2835.3 3022.5 3523.7 TRUE FALSE 3469.92796 3423.696624 3558.285524 2716.029473 2989.674736 2908.238509 2911.590505 2810.511271 3336.699691 3960.242559 0.876190766 0.864516901 0.898501915 0.68582402 0.754922127 0.734358683 0.735205095 0.709681599 0.842549324 1 11.95137308 -5.742395549 24.99697872 0.76340791 0.87821461 0.203068314 0.085708542 308.2392764 404592.5074 0.021615291 0.037364198 1.81E-06 5.742395549 0.114806699 ASVALTPTAPS(ph)R ddPTM_A459_MK2206_30min_R2 2 ASVALTPTAPSR 12 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7;H7BZ26 E9PHV5 SSFA2 Sperm-specific antigen 2 1 ASVALTPTAPS(1)R;ASVALTPT(0.001)APS(0.999)R 95.183 0.018271 26434000 123502 116486 105678 110246 94543 67058 104065 76957 65972 99070 TRUE FALSE 132957.4081 110701.4746 109201.2518 101238.5491 90830.76678 69609.93918 90401.1405 87015.54413 71710.12531 95837.35401 1.387323444 1.15509736 1.139443518 1.056357932 0.947759542 0.726334109 0.943276674 0.907950194 0.748248176 1 16.54830046 -5.411679274 0.762232238 0.858069165 1.423670424 0.767495732 0.090128111 0.62936816 0.496078645 0.040275462 0.262977135 3.88E-06 5.411679274 0.565601259 ASVAVSSFEHAGPSLPGLS(ph)PGACSLPAR ddPTM_A459_MK2206_30min_R2 2 ASVAVSSFEHAGPSLPGLSPGACSLPAR 28 0 Q8TER5;Q8TER5-2 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 ASVAVSSFEHAGPS(0.014)LPGLS(0.732)PGACS(0.254)LPAR;ASVAVSSFEHAGPS(0.004)LPGLS(0.7)PGACS(0.296)LPAR 93.542 0.00013562 3781400 8214.6 16520.9 11772.8 19265.7 15442.1 20376.6 15978.9 14038.2 17147.4 11561.3 TRUE FALSE 8843.516092 15700.49613 12165.29928 17691.63068 14835.76556 21152.04579 13880.85124 15873.04094 18638.84986 11184.05573 0.790725324 1.403828496 1.087735932 1.581861814 1.32651034 1.891267918 1.241128583 1.419256245 1.666555524 1 13.44915583 -4.36117834 1.055198222 1.453627064 6.24E-15 0.322287475 0.256431069 4.430418986 2.210323745 0.076390458 8.945535002 4.35E-05 4.36117834 -1.453627064 ASVGFGGS(ph)CFQK ddPTM_A459_MK2206_30min_R1 1 ASVGFGGSCFQK 12 0 O60701;O60701-2;O60701-3 O60701 UGDH UDP-glucose 6-dehydrogenase 1 AS(0.145)VGFGGS(0.855)CFQK 123.95 0.003172 8230200 1896 1753.6 2104.3 1622.7 1936.3 2055.5 1836.5 1465.7 1475.1 1165.9 TRUE FALSE 1734.735244 1639.440321 1961.465979 1747.680635 1859.173071 2171.880634 1713.990436 1452.885539 1628.441924 1310.340494 1.323881275 1.251155962 1.496913198 1.333760685 1.418847299 1.657493334 1.308049659 1.108784736 1.24276242 1 10.35572603 -7.613346678 4.584372701 1.134703164 1.412126869 0.555584736 0.117883947 0.174884421 6.510344574 0.059962739 0.033449165 2.44E-08 7.613346678 0.277423705 ASVGS(ph)PSSGEGHLAEPALSAYR ddPTM_A459_MK2206_30min_R1 1 ASVGSPSSGEGHLAEPALSAYR 22 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 ASVGS(0.795)PS(0.119)S(0.086)GEGHLAEPALSAYR 155.53 6.90E-09 3974000 832.59 669.37 858.64 514.92 1195.9 942.55 845.72 1009.4 522.39 678.15 TRUE FALSE 761.7738484 625.7938913 800.3579091 554.5792276 1148.264771 995.9163665 789.3035619 1000.574922 576.6943099 762.1643418 0.999487652 0.821074743 1.050111984 0.727637331 1.50658422 1.306695042 1.035608095 1.312807314 0.756653491 1 9.573958302 -6.237454379 24.99899933 1.170507816 0.904723011 0.257635788 0.20946706 1069.131637 1114330.678 0.060617953 0.078217853 5.79E-07 6.237454379 -0.265784805 ASVGS(ph)PSSGEGHLAEPALSAYR ddPTM_A459_MK2206_30min_R2 2 ASVGSPSSGEGHLAEPALSAYR 22 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 AS(0.038)VGS(0.957)PS(0.004)S(0.001)GEGHLAEPALSAYR;AS(0.132)VGS(0.712)PS(0.113)S(0.044)GEGHLAEPALSAYR 109.26 3.45E-05 14155100 20354.2 40621 23738 39703 41347 43931 36138 29490 47965 30976 TRUE FALSE 21912.5332 38603.82021 24529.41307 36459.1379 39723.50903 45602.82499 31393.03719 33344.44425 52136.909 29965.25566 0.731264684 1.288286029 0.818595154 1.216713727 1.325652265 1.521856697 1.047647901 1.112770224 1.739912037 1 14.87100306 -5.923658194 6.389690253 1.294195353 0.981858091 0.27694709 0.248066085 0.29393974 19.45843228 0.06791774 0.101431658 1.19E-06 5.923658194 -0.312337262 ASVLDTSMS(ph)AGSGSPSK ddPTM_A459_MK2206_30min_R1 1 ASVLDTSMSAGSGSPSK 17 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 ASVLDT(0.006)S(0.026)MS(0.695)AGS(0.179)GS(0.094)PSK 105.13 0.010192 13066000 6104.5 6338.1 6118.2 4843.5 5077.9 4881.9 5463.8 4778 5852.5 5229.2 TRUE FALSE 5585.280219 5925.488538 5702.91363 5216.547209 4875.63649 5158.308959 5099.319871 4736.22645 6460.888318 5877.032774 0.950357167 1.008244937 0.97037295 0.88761581 0.829608525 0.877706346 0.867669123 0.805887364 1.099345293 1 12.52087223 -5.722334723 5.91642688 0.895127716 0.980785951 0.103511477 0.08234818 0.320403404 28.48961923 0.021919959 0.037561059 1.90E-06 5.722334723 0.085658235 ASVLDTSMSAGS(ph)GSPSK ddPTM_A459_MK2206_30min_R2 1 ASVLDTSMSAGSGSPSK 17 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 ASVLDTSMS(0.021)AGS(0.76)GS(0.218)PSK 170 3.52E-06 14207000 89169 84894 80535 78804 83788 64985 93986 74640 64944 91894 TRUE FALSE 95995.8472 80678.28741 83219.9967 72365.46112 80498.06212 67458.04971 81645.5253 84395.70428 70592.71173 88895.50631 1.079872889 0.907563169 0.93615527 0.814050835 0.905535785 0.758846566 0.918443785 0.949380996 0.794108889 1 16.43982287 -3.93681787 1.261919352 0.875777461 2.203633966 0.397063087 0.071438516 9.755735607 2.730560714 0.019934174 28.01386495 0.00011566 3.93681787 1.327856505 ASVLDTSMSAGSGS(ph)PSK ddPTM_A459_MK2206_30min_R1 5 ASVLDTSMSAGSGSPSK 17 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 ASVLDTSMSAGS(0.002)GS(0.996)PS(0.002)K;ASVLDTSMSAGS(0.009)GS(0.97)PS(0.02)K;ASVLDT(0.002)SMS(0.024)AGS(0.109)GS(0.854)PS(0.011)K;ASVLDTSMS(0.001)AGS(0.094)GS(0.889)PS(0.017)K;ASVLDT(0.003)S(0.013)MS(0.071)AGS(0.079)GS(0.831)PS(0.003)K 271.45 1.08E-51 66537400 21509.8 23472.5 21890.2 18561 18476.8 16970.5 21245.2 19697.1 20783.6 20717.7 TRUE FALSE 19680.27856 21944.43598 20404.35421 19990.57144 17740.82993 17931.35504 19827.97147 19524.89033 22944.12959 23284.36509 0.845214309 0.942453698 0.876311385 0.858540543 0.761920278 0.770102813 0.851557317 0.838540809 0.985387813 1 14.50707392 -8.278273193 5.905982242 0.995641137 0.84297511 0.605859802 0.048283815 0.131523343 17.7588212 0.047847767 0.013907599 5.27E-09 8.278273193 -0.152666027 ASVLDTSMSAGSGS(ph)PSK ddPTM_A459_MK2206_30min_R2 6 ASVLDTSMSAGSGSPSK 17 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 ASVLDTSMSAGS(0.259)GS(0.723)PS(0.018)K;ASVLDTSMSAGS(0.021)GS(0.979)PSK;ASVLDTSMSAGS(0.016)GS(0.982)PS(0.001)K;ASVLDTSMS(0.012)AGS(0.401)GS(0.585)PS(0.003)K;ASVLDTSMS(0.002)AGS(0.108)GS(0.836)PS(0.052)K;ASVLDTSMSAGS(0.002)GS(0.989)PS(0.009)K 260.44 3.18E-40 137398000 716096 671319 669883 653937 759206 538820 837541 638806 570458 769766 TRUE FALSE 770920.8603 637982.2746 692216.5649 600508.2553 729395.7577 559325.1727 727570.8606 722300.1375 620075.4057 744648.5985 1.035281423 0.856756161 0.92958822 0.806431727 0.979516727 0.751126335 0.977066044 0.96998791 0.832708753 1 19.50620025 -10.39460424 5.018298078 1.000000111 0.902525384 0.100563256 0.085741809 1.91E-07 4.30E-08 0.077773566 0.018862819 4.03E-11 10.39460424 -0.097474727 ASVS(ph)GPNS(ph)PSETRR ddPTM_A459_MK2206_30min_R1 1 ASVSGPNSPSETRR 14 1 C9J453;A0A087X255;O15344-2;O15344;A0A087X0X0 C9J453 MID1 E3 ubiquitin-protein ligase Midline-1 2 AS(0.002)VS(0.946)GPNS(0.941)PS(0.106)ET(0.005)RR 111.81 0.012821 6553800 4288 3884.2 4067.7 3183.9 4285.2 3042.5 3900.4 3431.4 3015.4 2510 TRUE FALSE 3923.283083 3631.337874 3791.595857 3429.12453 4114.51141 3214.763721 3640.211433 3401.399632 3328.861621 2820.95775 1.390762794 1.287271273 1.344081051 1.215588759 1.458551235 1.139600095 1.290416857 1.205760573 1.180046607 1 11.46196934 -9.2804746 0.235332534 0.88724275 1.37800993 0.6122083 0.078248594 4.029867377 0.441278013 0.565089596 0.17531401 5.24E-10 9.2804746 0.49076718 ASVS(ph)GPNS(ph)PSETRR ddPTM_A459_MK2206_30min_R2 1 ASVSGPNSPSETRR 14 1 C9J453;A0A087X255;O15344-2;O15344;A0A087X0X0 C9J453 MID1 E3 ubiquitin-protein ligase Midline-1 2 AS(0.303)VS(0.662)GPNS(0.828)PS(0.205)ET(0.001)RR 127.07 0.0041892 11516000 41545 61857 53020 58821 54279 62617 59159 40920 52978 51717 TRUE FALSE 44725.71714 58785.27133 54787.66034 54015.13614 52147.73373 64999.93381 51391.35224 46268.3845 57585.93068 50029.47853 0.893987274 1.175012674 1.095107564 1.079666183 1.042340142 1.299232687 1.027221425 0.924822442 1.151039994 1 15.61049079 -7.48627922 24.96059205 1.017962879 1.103109167 0.09221229 0.108802718 1202.795013 820299.3272 0.044167373 0.029767129 3.26E-08 7.48627922 0.085146289 ASVS(ph)GPNSPS(ph)ETRR ddPTM_A459_MK2206_30min_R1 1 ASVSGPNSPSETRR 14 1 C9J453;A0A087X255;O15344-2;O15344;A0A087X0X0 C9J453 MID1 E3 ubiquitin-protein ligase Midline-1 2 AS(0.003)VS(0.796)GPNS(0.528)PS(0.489)ET(0.184)RR 115.26 0.009491 8478000 2472.5 2198.4 2285.9 2161.9 2134.6 1937.6 2302.9 1924.4 1625.7 1548.1 TRUE FALSE 2262.200891 2055.28376 2130.739477 2328.409913 2049.574362 2047.305238 2149.277743 1907.575174 1794.697333 1739.890316 1.300197415 1.181272027 1.224640115 1.338250976 1.177990557 1.17668638 1.235294963 1.096376683 1.031500271 1 10.76478064 -7.982206827 1.282824014 0.994044794 1.238062113 0.758331243 0.050579674 0.220712942 0.65415372 0.046039074 0.015891987 1.04E-08 7.982206827 0.244017319 ASVS(ph)PMDEPVPDS(ph)ESPIEK ddPTM_A459_MK2206_30min_R1 2 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 AS(0.411)VS(0.589)PMDEPVPDS(0.882)ES(0.118)PIEK;AS(0.186)VS(0.814)PMDEPVPDS(0.874)ES(0.126)PIEK 134.15 0.00084773 11115300 7747.4 7581.2 8271.8 7764.4 7388.3 6603.3 7000.5 7471.5 7319 6481.9 TRUE FALSE 7088.442947 7087.662502 7710.333263 8362.415433 7094.008366 6977.17314 6533.509418 7406.177463 8079.836241 7284.926708 0.973028725 0.972921594 1.058395447 1.147906598 0.973792689 0.957754747 0.896853144 1.01664406 1.109117026 1 12.83069874 ASVS(ph)PMDEPVPDSESPIEK ddPTM_A459_MK2206_30min_R1 14 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AS(0.014)VS(0.986)PMDEPVPDSESPIEK;AS(0.252)VS(0.748)PMDEPVPDSESPIEK;AS(0.003)VS(0.997)PMDEPVPDSESPIEK;AS(0.043)VS(0.957)PMDEPVPDSESPIEK;AS(0.036)VS(0.964)PMDEPVPDSESPIEK;AS(0.028)VS(0.968)PMDEPVPDS(0.002)ES(0.002)PIEK;AS(0.001)VS(0.999)PMDEPVPDSESPIEK;AS(0.023)VS(0.977)PMDEPVPDSESPIEK;ASVS(1)PMDEPVPDSESPIEK;AS(0.188)VS(0.811)PMDEPVPDSES(0.001)PIEK;ASVS(1)PMDEPVPDSESPIEK;AS(0.002)VS(0.998)PMDEPVPDSESPIEK;AS(0.137)VS(0.863)PMDEPVPDSESPIEK;ASVS(1)PMDEPVPDSESPIEK 330.65 1.27E-154 738187200 62312.6 64617.1 62282.4 55577.6 62251.5 55207 58097.4 57372.2 53550 49525.2 TRUE FALSE 57012.58615 60410.51505 58054.84422 59858.19638 59771.89094 58332.77263 54221.82845 56870.6009 59116.71413 55660.75567 1.024286959 1.08533408 1.043012146 1.075411134 1.073860572 1.048005402 0.974148263 1.021736055 1.062089679 1 15.76437287 -7.015719469 24.1012271 1.015557973 1.061566905 0.409937918 0.026080514 438.5349406 672364.3916 0.009621531 0.00768756 9.64E-08 7.015719469 0.046008932 ASVS(ph)PMDEPVPDSESPIEK ddPTM_A459_MK2206_30min_R2 20 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AS(0.042)VS(0.958)PMDEPVPDSESPIEK;AS(0.006)VS(0.994)PMDEPVPDSESPIEK;AS(0.017)VS(0.983)PMDEPVPDSESPIEK;AS(0.03)VS(0.97)PMDEPVPDSESPIEK;AS(0.017)VS(0.983)PMDEPVPDSESPIEK;AS(0.163)VS(0.837)PMDEPVPDSESPIEK;AS(0.01)VS(0.99)PMDEPVPDSESPIEK;AS(0.036)VS(0.964)PMDEPVPDSESPIEK;AS(0.028)VS(0.972)PMDEPVPDSESPIEK;AS(0.008)VS(0.992)PMDEPVPDSESPIEK;AS(0.03)VS(0.97)PMDEPVPDSESPIEK;AS(0.019)VS(0.961)PMDEPVPDS(0.001)ES(0.019)PIEK;AS(0.017)VS(0.983)PMDEPVPDSESPIEK;AS(0.03)VS(0.97)PMDEPVPDSESPIEK;AS(0.286)VS(0.713)PMDEPVPDS(0.001)ES(0.001)PIEK;AS(0.031)VS(0.969)PMDEPVPDSESPIEK;AS(0.224)VS(0.776)PMDEPVPDSESPIEK;AS(0.065)VS(0.935)PMDEPVPDSESPIEK;AS(0.014)VS(0.986)PMDEPVPDSESPIEK;AS(0.012)VS(0.988)PMDEPVPDSESPIEK 234.36 1.36E-23 695988900 1675987.7 1859383 1737216.3 1927574 2037203 1715258.3 2056932.2 1635339.8 1639671.7 1899796.1 TRUE FALSE 1804302.607 1767048.744 1795134.224 1770085.038 1957212.174 1780533.657 1786854.531 1849084.327 1782287.381 1837805.909 0.981769945 0.961499109 0.97678118 0.963151239 1.064972185 0.968836615 0.972275975 1.006136893 0.969790864 1 20.80955298 ASVS(ph)QTSPQSASSPR ddPTM_A459_MK2206_30min_R1 2 ASVSQTSPQSASSPR 15 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 AS(0.235)VS(0.764)QT(0.001)SPQSASSPR;AS(0.014)VS(0.886)QT(0.099)S(0.001)PQSASSPR 201.75 1.48E-05 13158500 1568.79 1339.17 1806.43 1240.37 1692.3 1273.62 1360 1498.71 1203 1107.94 TRUE FALSE 1435.356172 1251.98979 1683.814565 1335.903512 1624.892107 1345.731264 1269.276881 1485.606936 1328.056155 1245.199972 1.152711376 1.005452793 1.3522443 1.07284255 1.304924626 1.080735058 1.019335778 1.193066953 1.066540463 1 10.28216173 -6.912014749 24.99970074 1.080642389 1.174037286 0.198329776 0.105406462 39.96488161 11346.36255 0.035886535 0.031648948 1.22E-07 6.912014749 0.093394897 ASVS(ph)QTSPQSASSPR ddPTM_A459_MK2206_30min_R2 1 ASVSQTSPQSASSPR 15 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 AS(0.001)VS(0.998)QTSPQSASSPR 127.07 0.0010882 7245200 6435.6 7282.6 7032.6 8728.2 7581.8 6157.5 7892.2 4175.3 4504 5248.5 TRUE FALSE 6928.314484 6920.956674 7267.063374 8015.07814 7284.100437 6391.827977 6855.94466 4721.026046 4895.749779 5077.241875 1.364582318 1.363133143 1.431301394 1.578628385 1.434656969 1.258917368 1.35032855 0.929840682 0.964253801 1 12.30982927 -7.7142254 4.612560628 0.957227316 1.405046838 0.866784036 0.07782084 0.073876319 3.354624597 0.045165808 0.024103706 1.93E-08 7.7142254 0.447819522 ASVSGPNS(ph)PSETR ddPTM_A459_MK2206_30min_R1 3 ASVSGPNSPSETR 13 0 C9J453;A0A087X255;O15344-2;O15344;A0A087X0X0 C9J453 MID1 E3 ubiquitin-protein ligase Midline-1 1 AS(0.002)VS(0.034)GPNS(0.754)PS(0.202)ET(0.009)R;ASVSGPNS(0.975)PS(0.025)ETR;ASVS(0.014)GPNS(0.712)PS(0.263)ET(0.011)R 227.91 6.02E-13 26873000 7855.43 7019.06 6893.12 5700.34 6928.88 6943.13 8267 7278.3 7592.4 8322.89 TRUE FALSE 7187.284428 6562.117918 6425.23422 6139.381174 6652.888037 7336.24402 7715.523514 7214.66659 8381.65715 9353.992448 0.76836543 0.70153124 0.686897521 0.656338051 0.71123513 0.784290137 0.824837475 0.771292753 0.896051306 1 13.19136655 -8.256683797 0.558674489 1.002741619 0.697705032 0.849225187 0.038626143 0.31469158 0.239605164 0.042935091 0.02145256 5.54E-09 8.256683797 -0.305036587 ASVSGPNS(ph)PSETR ddPTM_A459_MK2206_30min_R2 2 ASVSGPNSPSETR 13 0 C9J453;A0A087X255;O15344-2;O15344;A0A087X0X0 C9J453 MID1 E3 ubiquitin-protein ligase Midline-1 1 ASVS(0.003)GPNS(0.496)PS(0.496)ET(0.006)R;ASVSGPNS(0.769)PS(0.228)ET(0.002)R 167.92 0.00029354 40235400 63377 60552 49749 66772 43448 58993 72068 51977 64980 74284 TRUE FALSE 68229.19185 57545.07573 51407.60683 61316.51401 41742.01321 61238.01995 62605.38503 58770.57236 70631.84294 71860.11916 0.949472289 0.800792935 0.71538438 0.853275986 0.580878708 0.852183668 0.871211818 0.817846854 0.982907401 1 16.13290371 -8.163226107 1.198988986 1.007919889 0.787043743 0.376648717 0.094726356 0.481052637 1.314885799 0.088533648 0.02932844 6.87E-09 8.163226107 -0.220876146 ASVSGPNS(ph)PSETRR ddPTM_A459_MK2206_30min_R1 3 ASVSGPNSPSETRR 14 1 C9J453;A0A087X255;O15344-2;O15344;A0A087X0X0 C9J453 MID1 E3 ubiquitin-protein ligase Midline-1 1 ASVSGPNS(0.916)PS(0.051)ET(0.034)RR;ASVSGPNS(0.995)PS(0.003)ET(0.002)RR;ASVS(0.011)GPNS(0.681)PS(0.122)ET(0.186)RR 121.51 0.00098026 95498500 6186.58 5745.59 5438.91 4832.63 6003.03 6102.74 6564.13 5806.28 4835.63 4839.9 TRUE FALSE 5660.378884 5371.551047 5069.731943 5204.84 5763.916603 6448.271865 6126.248865 5755.516306 5338.311043 5439.503351 1.040605827 0.987507627 0.932021108 0.956859416 1.059640234 1.18545232 1.12625151 1.058095921 0.981396774 1 12.40925922 -6.352187608 5.265942616 1.081549004 0.976748786 0.332977807 0.060651696 0.248919254 11.10470617 0.020345184 0.023186829 4.44E-07 6.352187608 -0.104800219 ASVSGPNS(ph)PSETRR ddPTM_A459_MK2206_30min_R2 3 ASVSGPNSPSETRR 14 1 C9J453;A0A087X255;O15344-2;O15344;A0A087X0X0 C9J453 MID1 E3 ubiquitin-protein ligase Midline-1 1 ASVS(0.373)GPNS(0.557)PS(0.063)ET(0.007)RR;ASVSGPNS(0.996)PS(0.003)ET(0.001)RR;ASVS(0.001)GPNS(0.734)PS(0.132)ET(0.132)RR 182.7 0.00013694 90400000 147195 221980 187298 244068 182081 252412 222771 177384 254627 182089 TRUE FALSE 158464.3624 210956.796 193542.4218 224126.8637 174931.5851 262017.7155 193520.9001 200568.6979 276773.9962 176147.4508 0.89961201 1.197614811 1.098752329 1.272382101 0.993097455 1.487490817 1.098630149 1.138640933 1.571263137 1 17.42642407 -4.068335595 1.085267116 1.222114798 3.05E-35 0.196371881 0.183101328 11.38718286 3.629138443 0.053633973 23.26083625 8.54E-05 4.068335595 -1.222114798 ASVSGPNSPS(ph)ESR ddPTM_A459_MK2206_30min_R2 1 ASVSGPNSPSESR 13 0 A6PVI4;Q9UJV3-2;Q9UJV3 A6PVI4 MID2 Probable E3 ubiquitin-protein ligase MID2 1 ASVSGPNS(0.127)PS(0.866)ES(0.006)R 115.09 0.0045117 0 6923.5 8667.7 6134 8030.8 7237.3 9900.5 9897.2 6781.3 6859.5 6746.8 TRUE FALSE 7453.568483 8237.274622 6338.504498 7374.657951 6953.127237 10277.27047 8597.685751 7667.639194 7456.126911 6526.652469 1.142020127 1.262097938 0.971172363 1.129929621 1.065343569 1.574661822 1.317319375 1.174819593 1.142412124 1 12.67212751 ASVSGPNSPS(ph)ETR ddPTM_A459_MK2206_30min_R1 1 ASVSGPNSPSETR 13 0 C9J453;A0A087X255;O15344-2;O15344;A0A087X0X0 C9J453 MID1 E3 ubiquitin-protein ligase Midline-1 1 ASVSGPNS(0.024)PS(0.969)ET(0.007)R 238.65 1.07E-17 25833000 2239.5 2649.9 2564.7 1736.3 2381.9 2687.6 3026.1 2572.2 3274.5 3236 TRUE FALSE 2049.018765 2477.391028 2390.61531 1870.030127 2287.023879 2839.769589 2824.23439 2549.711527 3614.895993 3636.900111 0.563397042 0.681182038 0.657322235 0.514182427 0.628838794 0.780821442 0.776549893 0.701067241 0.99394976 1 11.82849359 -7.91862796 0.643502557 1.013920731 0.606791721 0.768653441 0.07457411 0.354604031 0.309397061 0.073800423 0.036815371 1.21E-08 7.91862796 -0.407129009 ASVSGPNSPS(ph)ETR ddPTM_A459_MK2206_30min_R2 1 ASVSGPNSPSETR 13 0 C9J453;A0A087X255;O15344-2;O15344;A0A087X0X0 C9J453 MID1 E3 ubiquitin-protein ligase Midline-1 1 ASVS(0.008)GPNS(0.191)PS(0.801)ETR 104.9 0.0074826 5171800 15761 19640 13926 20483 13606 18765 20054 16720 17562 17809 TRUE FALSE 16967.67428 18664.70616 14390.28589 18809.47338 13071.76008 19479.11522 17420.88571 18905.36141 19089.51102 17227.89379 0.984895454 1.08340035 0.835289912 1.091803421 0.758755553 1.130673051 1.011202293 1.09736928 1.108058318 1 14.07245871 ASVSGPNSPS(ph)ETRR ddPTM_A459_MK2206_30min_R1 1 ASVSGPNSPSETRR 14 1 C9J453;A0A087X255;O15344-2;O15344;A0A087X0X0 C9J453 MID1 E3 ubiquitin-protein ligase Midline-1 1 ASVSGPNS(0.25)PS(0.576)ET(0.174)RR 144.4 0.00095187 9476800 2573.8 2614.3 2545.6 2244.8 2833 2835.1 3330.6 2801.9 2371.6 2196.6 TRUE FALSE 2354.884794 2444.108595 2372.811764 2417.694885 2720.155611 2995.620912 3108.421751 2777.403284 2618.136307 2468.731391 0.953884575 0.990026134 0.961146187 0.979326829 1.101843489 1.213425212 1.259117035 1.125032595 1.060518903 1 11.26955416 -6.33306767 3.50199303 1.148064348 0.970184946 0.544837691 0.06913439 0.179411469 4.311197345 0.022883106 0.026853889 4.64E-07 6.33306767 -0.177879402 ASVSPMDEPVPDS(ph)ESPIEK ddPTM_A459_MK2206_30min_R1 4 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AS(0.001)VS(0.057)PMDEPVPDS(0.865)ES(0.077)PIEK;ASVSPMDEPVPDS(0.979)ES(0.02)PIEK;ASVSPMDEPVPDS(0.994)ES(0.005)PIEK;ASVSPMDEPVPDS(0.988)ES(0.011)PIEK 188.96 1.02E-14 42027000 14809.5 17203.1 17178.3 15417.7 15065.3 13114.9 14062.9 14686 14827.1 13601.7 TRUE FALSE 13549.87426 16083.17506 16012.28486 16605.17393 14465.2172 13857.4543 13124.7896 14557.60185 16368.4301 15286.78128 0.8863785 1.052096891 1.047459538 1.086243966 0.946256568 0.906499154 0.858571164 0.952300002 1.070757133 1 13.89999705 -6.312954673 20.28840609 0.946025698 1.022578001 0.143368499 0.071982871 73.34591824 28885.09882 0.023182408 0.026286636 4.86E-07 6.312954673 0.076552303 ASVSPMDEPVPDS(ph)ESPIEK ddPTM_A459_MK2206_30min_R2 4 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ASVSPMDEPVPDS(0.594)ES(0.406)PIEK;AS(0.001)VS(0.152)PMDEPVPDS(0.682)ES(0.164)PIEK;ASVSPMDEPVPDS(0.994)ES(0.006)PIEK;ASVSPMDEPVPDS(0.681)ES(0.319)PIEK 179.07 6.14E-13 30508200 226841 271307 236936 241033 238827 198911 278733 198162 210432 250214 TRUE FALSE 244208.1214 257834.2889 244835.328 221339.8329 229449.452 206480.6975 242135.0223 224062.4538 228734.995 242049.5377 1.008917942 1.065212896 1.011509174 0.914440222 0.947944186 0.853051402 1.00035317 0.925688419 0.944992489 1 17.88494281 -5.635247168 4.807038122 0.93715752 1.037318966 0.482822388 0.041862879 0.157242971 5.909896543 0.011011496 0.019564934 2.32E-06 5.635247168 0.100161446 ASVSPMDEPVPDSES(ph)PIEK ddPTM_A459_MK2206_30min_R1 14 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ASVSPMDEPVPDS(0.083)ES(0.917)PIEK;ASVSPMDEPVPDS(0.078)ES(0.922)PIEK;ASVSPMDEPVPDS(0.32)ES(0.68)PIEK;ASVSPMDEPVPDS(0.292)ES(0.708)PIEK;ASVSPMDEPVPDS(0.1)ES(0.9)PIEK;ASVSPMDEPVPDS(0.355)ES(0.645)PIEK;ASVSPMDEPVPDS(0.001)ES(0.999)PIEK;ASVSPMDEPVPDS(0.02)ES(0.98)PIEK;ASVSPMDEPVPDS(0.003)ES(0.997)PIEK;ASVSPMDEPVPDS(0.046)ES(0.954)PIEK;ASVSPMDEPVPDSES(1)PIEK;ASVSPMDEPVPDS(0.001)ES(0.999)PIEK;ASVSPMDEPVPDS(0.089)ES(0.911)PIEK;ASVSPMDEPVPDS(0.043)ES(0.957)PIEK 324.29 2.00E-135 798948100 64838.81 69835.26 68802.44 61047.24 59388.52 53335.34 60315.46 58868.28 57956.47 53486.59 TRUE FALSE 59323.92873 65288.97188 64132.32207 65749.109 57022.94949 56355.14086 56291.92572 58353.60083 63981.25246 60112.91257 0.986874969 1.086105615 1.066864328 1.093760162 0.948597349 0.937488111 0.936436504 0.970733214 1.06435123 1 15.8753873 -6.265506622 24.99547612 0.970873851 1.060984656 0.44907442 0.044289129 308.1470336 1893733.344 0.013947768 0.016421679 5.43E-07 6.265506622 0.090110804 ASVSPMDEPVPDSES(ph)PIEK ddPTM_A459_MK2206_30min_R2 15 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ASVSPMDEPVPDS(0.37)ES(0.63)PIEK;ASVSPMDEPVPDS(0.187)ES(0.813)PIEK;ASVSPMDEPVPDS(0.001)ES(0.999)PIEK;ASVSPMDEPVPDS(0.392)ES(0.608)PIEK;ASVSPMDEPVPDS(0.213)ES(0.787)PIEK;ASVSPMDEPVPDS(0.008)ES(0.992)PIEK;ASVS(0.009)PMDEPVPDS(0.471)ES(0.52)PIEK;ASVSPMDEPVPDS(0.034)ES(0.966)PIEK;ASVSPMDEPVPDS(0.022)ES(0.978)PIEK;ASVSPMDEPVPDS(0.003)ES(0.997)PIEK;ASVSPMDEPVPDS(0.296)ES(0.704)PIEK;ASVS(0.001)PMDEPVPDS(0.009)ES(0.99)PIEK;ASVSPMDEPVPDS(0.07)ES(0.93)PIEK;ASVSPMDEPVPDS(0.01)ES(0.99)PIEK;ASVSPMDEPVPDS(0.018)ES(0.982)PIEK 234.51 6.10E-29 415914600 981806 1081015 1050161 1024093 1077925 858764 1167367 901918 890823 1042055 TRUE FALSE 1056973.822 1027333.367 1085172.844 940421.326 1035600.248 891444.8658 1014090.311 1019801.779 968305.1743 1008052.831 1.048530186 1.019126514 1.07650394 0.93290877 1.027327355 0.884323558 1.00598925 1.011655092 0.960569868 1 19.94313982 -5.756132666 24.99984174 0.974900705 1.045160844 0.39138275 0.04188122 137.4267268 647405.9774 0.011098859 0.018516705 1.75E-06 5.756132666 0.070260139 ASVSQT(ph)SPQSASSPR ddPTM_A459_MK2206_30min_R1 2 ASVSQTSPQSASSPR 15 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 ASVS(0.021)QT(0.306)S(0.306)PQS(0.002)AS(0.282)S(0.083)PR;ASVS(0.003)QT(0.467)S(0.467)PQS(0.049)AS(0.014)SPR 189.33 6.10E-05 21912700 3930.66 3909.58 4267.07 3234.2 4487.31 3926.42 4384.61 3795.9 3277.55 3165.5 TRUE FALSE 3596.336726 3655.065631 3977.433177 3483.298644 4308.570941 4148.730507 4092.120667 3762.712846 3618.263051 3557.666038 1.010869679 1.027377385 1.117989472 0.979096578 1.21106672 1.166138267 1.150226194 1.057635204 1.0170328 1 11.79671537 -2.378479817 20.85068579 1.081160652 0.322280679 0 0.077282992 0 0 0.018346327 0 0.004183311 2.378479817 -0.758879973 ASVSQT(ph)SPQSASSPR ddPTM_A459_MK2206_30min_R2 4 ASVSQTSPQSASSPR 15 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 ASVSQT(0.665)S(0.32)PQS(0.013)AS(0.001)SPR;ASVS(0.001)QT(0.448)S(0.448)PQS(0.091)AS(0.009)S(0.003)PR;ASVS(0.094)QT(0.648)S(0.235)PQS(0.006)AS(0.016)SPR;AS(0.199)VS(0.183)QT(0.601)S(0.008)PQS(0.008)AS(0.002)SPR 211.45 2.26E-06 45374300 56698.5 65943.6 55485.5 64988.3 58204.9 65046 61726.8 55584.4 61602 59172.6 TRUE FALSE 61039.38075 62668.93671 57335.35888 59678.548 55919.48317 67521.37111 53621.99701 62849.47193 66960.03061 57241.80291 1.066342736 1.094810672 1.001634399 1.042569328 0.976899404 1.179581489 0.936762895 1.097964577 1.169775011 1 15.80478149 ASVSQTS(ph)PQSASSPR ddPTM_A459_MK2206_30min_R2 1 ASVSQTSPQSASSPR 15 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 ASVS(0.003)QT(0.244)S(0.392)PQS(0.049)AS(0.035)S(0.277)PR 168.68 6.44E-05 21643000 6996 10672 8349.3 10732 9503.4 9750.7 8378 8421.6 8048.8 8128 TRUE FALSE 7531.619139 10142.044 8627.661495 9855.16127 9130.248765 10121.76972 7277.958536 9522.332036 8748.870075 7862.784026 0.957881981 1.289879509 1.097278199 1.253393358 1.161197959 1.287300998 0.925621067 1.211063665 1.112693678 1 12.94082451 -8.54494104 20.33837524 0.999999993 1.152789968 0.120370822 0.119645605 765.8369951 705997.8381 0.10809923 0.027911101 2.85E-09 8.54494104 0.152789975 ASVSQTSPQS(ph)ASSPR ddPTM_A459_MK2206_30min_R1 1 ASVSQTSPQSASSPR 15 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 ASVS(0.002)QT(0.027)S(0.027)PQS(0.528)AS(0.402)S(0.014)PR 165.89 8.33E-05 23735000 4550.3 4406.4 4702.9 4167 5149.5 4475.9 4959.6 4601.9 4586.3 4151.8 TRUE FALSE 4163.27309 4119.542559 4383.680251 4487.943062 4944.384511 4729.32159 4628.754133 4561.666073 5063.062297 4666.156328 0.89222752 0.882855667 0.939462792 0.961807266 1.059626845 1.013536894 0.991984367 0.977606782 1.085060581 1 12.18801893 -5.744300456 1.812665641 1.017926781 0.888562053 0.733644527 0.031883634 0.180255892 1.205001003 0.009902848 0.020820906 1.80E-06 5.744300456 -0.129364728 ASVVDPSTESSPAPQEGSEQPAS(ph)PASPLSSR ddPTM_A459_MK2206_30min_R2 1 ASVVDPSTESSPAPQEGSEQPASPASPLSSR 31 0 Q66K14;Q66K14-2 Q66K14 TBC1D9B TBC1 domain family member 9B 1 ASVVDPSTESSPAPQEGSEQPAS(0.504)PAS(0.379)PLS(0.058)S(0.058)R 131.39 2.72E-18 4483700 20646 21016 22321 25351 20877 22205 26572 18966 20066 27232 TRUE FALSE 22226.67363 19972.376 23065.171 23279.74221 20057.26408 23050.02683 23083.06448 21444.92132 21811.30441 26343.42207 0.843727651 0.758154197 0.875557129 0.883702282 0.76137656 0.874982255 0.876236368 0.814052224 0.827960177 1 14.68515515 -11.2390435 2.412503043 1.034087186 0.835038453 0.560340236 0.043824647 6302966.714 4531700.647 1294510.424 0.011195824 5.77E-12 11.2390435 -0.199048733 ASYDVSDSGQLEHVQPWS(ph)V ddPTM_A459_MK2206_30min_R1 4 ASYDVSDSGQLEHVQPWSV 19 0 Q01813;Q01813-2;B1APP6 Q01813 PFKP "ATP-dependent 6-phosphofructokinase, platelet type" 1 ASYDVSDSGQLEHVQPWS(1)V;ASYDVSDSGQLEHVQPWS(1)V;ASYDVSDSGQLEHVQPWS(1)V;ASYDVSDSGQLEHVQPWS(1)V 216.77 4.78E-19 41619600 6219.64 5538.1 5572.25 4689.55 5958.86 5447.52 6106.96 5154.8 4601.62 4230.91 TRUE FALSE 5690.626957 5177.568683 5194.021195 5050.739954 5721.505988 5755.953875 5699.575841 5109.732127 5079.974866 4755.067073 1.196750092 1.088852924 1.092312919 1.062180591 1.203244013 1.210488472 1.19863206 1.074586762 1.068328751 1 12.21524998 -8.244923486 1.936475865 1.012207687 1.145489265 0.438390151 0.053728435 0.351097402 2.411460114 0.055125724 0.016272291 5.69E-09 8.244923486 0.133281579 ASYDVSDSGQLEHVQPWS(ph)V ddPTM_A459_MK2206_30min_R2 2 ASYDVSDSGQLEHVQPWSV 19 0 Q01813;Q01813-2;B1APP6 Q01813 PFKP "ATP-dependent 6-phosphofructokinase, platelet type" 1 ASYDVSDSGQLEHVQPWS(1)V;ASYDVSDSGQLEHVQPWS(1)V 141.6 0.00010172 9788100 41723 48039 45158 47334 51817 53957 50642 42781 45934 48806 TRUE FALSE 44917.34496 45653.45312 46663.54518 43466.66079 49782.40422 56010.37144 43992.64457 48372.62359 49929.25629 47213.46422 0.951367278 0.966958343 0.988352496 0.920641209 1.054411174 1.186322003 0.931781755 1.024551458 1.057521559 1 15.52691072 -6.274447995 24.52595157 1.045320958 0.959804916 0.315549848 0.061612029 773.8762649 1459033.997 0.019603845 0.022370799 5.32E-07 6.274447995 -0.085516043 ASYHFSPEELDENTS(ph)PLLGDAR ddPTM_A459_MK2206_30min_R2 1 ASYHFSPEELDENTSPLLGDAR 22 0 E5RFM9;R4GMT7;O75410-7;O75410-9;O75410;O75410-2;E5RJU4;H0YAY0;E7EVI4;E7ET87;O75410-3 E5RFM9 TACC1 Transforming acidic coiled-coil-containing protein 1 1 ASYHFSPEELDENT(0.265)S(0.735)PLLGDAR 119.2 2.46E-05 5349900 12126 20563 17547 28053 23765 26239 21473 15059 17686 21388 TRUE FALSE 13054.37588 19541.87132 18132.00822 25760.98016 22831.86669 27237.54353 18653.56931 17027.26301 19224.29631 20690.11131 0.630947591 0.944502957 0.876361077 1.245086591 1.103515894 1.316452247 0.901569306 0.822966235 0.929153837 1 14.33665379 -4.523413492 1.420359558 1.037555552 0.23414075 0.384578877 0.150137821 2.63860755 3.049211185 0.047207365 3.599799505 3.00E-05 4.523413492 -0.803414802 ASYNNPHR ddPTM_A459_MK2206_30min_R2 4 ASYNNPHR 8 0 A0A494C0B4;P54725-2;P54725-3;P54725;K7ELU6 A0A494C0B4 RAD23A UV excision repair protein RAD23 homolog A 0 ;;; 127.46 0.00643 2551340 17190.9 19791.2 17724 20385.4 19701.4 18266.5 18337 21164.5 20562 20945.6 FALSE TRUE 18507.04852 18808.39779 18314.90931 18719.84761 18927.82404 18961.64446 15929.32987 23930.77282 22350.44559 20262.14679 0.913380439 0.928252963 0.903897771 0.923882736 0.93414702 0.935816163 0.786162002 1.181058111 1.103064045 1 14.30649942 -7.769835714 24.99999056 1.106545823 0.90779284 0.69177607 0.058235818 97.9297753 291579.5904 0.029825822 0.014698549 1.70E-08 7.769835714 -0.198752983 AT(ph)GANAT(ph)PLAAAAS(ph)T(ph)ATVPRR ddPTM_A459_MK2206_30min_R1 1 ATGANATPLAAAASTATVPRR 21 1 F8WEG7 F8WEG7 SF1 4 AT(1)GANAT(1)PLAAAAS(0.996)T(0.996)AT(0.007)VPRR 50.659 0.027166 5208300 503.75 486.56 638.89 758.33 623.35 413.34 634.56 588.2 466.09 489.83 TRUE FALSE 460.9034172 454.8848556 595.5239268 816.736708 598.5206495 436.7429536 592.2296602 583.0574294 514.5417234 550.5138384 0.837224035 0.82629141 1.08176014 1.483589786 1.087203641 0.793336921 1.075776155 1.059114937 0.934657201 1 9.104635019 -5.260951712 23.93818044 1.073047785 0.831757686 0.24040291 0.164866146 34.38572469 1687651.873 0.046327672 0.10840403 5.48E-06 5.260951712 -0.241290099 AT(ph)ISDEEIER ddPTM_A459_MK2206_30min_R1 2 ATISDEEIER 10 0 C9J0A7;Q9UQN3-2;Q9UQN3 C9J0A7 CHMP2B Charged multivesicular body protein 2b 1 AT(0.974)IS(0.026)DEEIER;AT(0.658)IS(0.342)DEEIER 206.36 0.00039221 601640000 3392.2 3369.9 3551 3200.2 3669.6 3375.6 3742.2 3301.9 2845.3 2730.7 TRUE FALSE 3103.675577 3150.518897 3309.968014 3446.679958 3523.432061 3566.723555 3492.564666 3273.031836 3141.079117 3068.999732 1.011298745 1.026562129 1.078516879 1.123062972 1.148071805 1.162177865 1.138014002 1.06648163 1.023486279 1 11.5835528 -5.320497619 2.791758211 1.103995838 1.014531621 0.24336754 0.05065417 0.351365647 5.30341481 0.014513986 0.040592098 4.78E-06 5.320497619 -0.089464216 AT(ph)ISDEEIER ddPTM_A459_MK2206_30min_R2 1 ATISDEEIER 10 0 C9J0A7;Q9UQN3-2;Q9UQN3 C9J0A7 CHMP2B Charged multivesicular body protein 2b 1 AT(0.84)IS(0.16)DEEIER 155.33 0.0012328 484580000 31757 33551 34852 38172 31434 31556 34010 28856 31724 29586 TRUE FALSE 34188.34034 31884.90613 36013.94829 35053.22549 30199.74322 32756.88569 29544.44615 32627.57828 34483.29618 28620.61124 1.194535646 1.114053989 1.258322122 1.224754608 1.055174642 1.144520829 1.032278657 1.140002846 1.20484136 1 14.80476686 -6.254425027 24.96433575 1.102362866 1.196241088 0.365497071 0.065373766 670.9023498 2387763.585 0.019456044 0.024585048 5.57E-07 6.254425027 0.093878221 AT(ph)NESEDEIPQLVPIGK ddPTM_A459_MK2206_30min_R1 2 ATNESEDEIPQLVPIGK 17 0 O76021;J3QSV6;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AT(0.872)NES(0.128)EDEIPQLVPIGK;AT(0.5)NES(0.5)EDEIPQLVPIGK 101.29 0.0070567 0 1934.42 2135.6 2045.04 1890.97 1992.6 1847.48 1652.91 1964.31 1749.41 1736.9 TRUE FALSE 1769.887421 1996.572052 1906.228383 2036.612837 1913.230523 1952.082721 1542.64739 1947.136245 1931.26743 1952.080285 0.906667331 1.022791976 0.976511262 1.04330383 0.980098276 1.000001248 0.790258168 0.997467297 0.989338115 1 10.93079667 AT(ph)PAQTPR ddPTM_A459_MK2206_30min_R2 2 ATPAQTPR 8 0 A0A3B3ITP6;A0A3B3IT92;P33991;A0A3B3IS57;E5RFR3;E5RG53 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 AT(1)PAQTPR;AT(0.992)PAQT(0.008)PR 109.83 0.028726 105691000 179554 224018 121064 222914 187712 183142 176664 141822 168011 133183 TRUE FALSE 193300.7923 212893.5919 125100.2133 204701.2131 180341.4837 190111.5971 153467.8046 160358.6223 182624.2931 128837.2496 1.50034864 1.652422669 0.970994132 1.588835634 1.399761981 1.475594967 1.191175728 1.244660398 1.417480532 1 16.97519024 -13.72716638 0.11542097 6.95E-11 1.587050702 0.306570809 0.185462559 164.9504272 1.496047001 40.75399445 2.099258142 1.87E-14 13.72716638 1.587050702 AT(ph)PPPS(ph)PLLSELLK ddPTM_A459_MK2206_30min_R2 1 ATPPPSPLLSELLK 14 0 H7C128;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2 H7C128 BRD8 Bromodomain-containing protein 8 2 AT(1)PPPS(1)PLLSELLK 119 0.026219 0 10690 10943 10923 12276 12487 10640 11026 9973.1 9877.5 13021 TRUE FALSE 11508.43462 10399.58653 11287.16737 11273.01153 11996.69764 11044.91266 9578.272955 11276.61841 10736.6271 12596.12584 0.91364875 0.825617866 0.896082455 0.894958631 0.952411701 0.876849977 0.7604142 0.895244979 0.852375344 1 13.62069245 -7.191837601 0.0068114 1.766913347 7.95E-07 0.092009322 0.05955702 14419.9864 54.9224392 7037.674365 7205.128689 6.43E-08 7.191837601 -1.766912552 AT(ph)PPPS(ph)PLLSELLKK ddPTM_A459_MK2206_30min_R1 1 ATPPPSPLLSELLKK 15 1 H7C128;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2 H7C128 BRD8 Bromodomain-containing protein 8 2 AT(1)PPPS(1)PLLSELLKK 135.08 0.00059876 2117000 1879.3 1843.8 1841.6 1532.4 1499.5 1228.6 1473 1628 1020.3 825.42 TRUE FALSE 1719.455666 1723.768285 1716.597323 1650.425714 1439.77174 1298.16227 1374.738858 1613.766568 1126.363836 927.6792612 1.853502324 1.858151149 1.850421147 1.77909088 1.552014581 1.399365411 1.481911815 1.739573832 1.214173781 1 9.857482279 -6.031964328 0.06798469 8.12E-14 3.410304012 0.791949255 0.129265349 36.76301246 0.651460528 11.74609036 21.15131632 9.29E-07 6.031964328 3.410304012 AT(ph)PPPSPLLSELLK ddPTM_A459_MK2206_30min_R1 1 ATPPPSPLLSELLK 14 0 H7C128;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2 H7C128 BRD8 Bromodomain-containing protein 8 1 AT(0.981)PPPS(0.019)PLLSELLK 92.611 0.036219 7093300 374.23 464.79 515.65 295.68 452.44 260 475.55 367.03 202.19 352.15 TRUE FALSE 342.3997733 434.5320865 480.6491147 318.4533248 434.4183567 274.7209753 443.8269272 363.8210954 223.208374 395.7770006 0.865133074 1.097921521 1.21444428 0.804628173 1.097634163 0.694130722 1.121406566 0.919257801 0.563975101 1 8.628543967 -6.304173491 1.309865334 0.875554455 1.042691561 0.108598854 0.185920622 0.982525608 3.429270158 0.073595559 0.10057235 4.96E-07 6.304173491 0.167137107 AT(ph)PPPSPLLSELLKK ddPTM_A459_MK2206_30min_R1 2 ATPPPSPLLSELLKK 15 1 H7C128;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2 H7C128 BRD8 Bromodomain-containing protein 8 1 AT(1)PPPSPLLSELLKK;AT(0.999)PPPS(0.001)PLLSELLKK 124.91 0.0015915 22100000 10964.8 11915.2 12337.4 12095 12776.4 9099.5 9883.2 12903.4 8360 5585.1 TRUE FALSE 10032.18618 11139.51831 11499.97166 13026.559 12267.48893 9614.705826 9223.909761 12790.58693 9229.051917 6277.024353 1.598239168 1.774649529 1.832073768 2.07527616 1.954347832 1.531729891 1.469471718 2.037683178 1.470290921 1 12.61586509 -6.769568558 24.99287687 1.564667577 1.854764384 0.286071533 0.263235284 284.5139041 874722.8355 0.09152638 0.082081786 1.70E-07 6.769568558 0.290096807 AT(ph)PSENLVPSSAR ddPTM_A459_MK2206_30min_R1 2 ATPSENLVPSSAR 13 0 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 AT(0.99)PS(0.01)ENLVPSSAR;AT(0.833)PS(0.047)ENLVPS(0.06)S(0.06)AR 135.02 0.0027341 41447000 1362.63 1403.61 1369.52 1087.11 1296.25 1244.86 1545.63 1345.59 1459.26 1648.07 TRUE FALSE 1246.731163 1312.234734 1276.560798 1170.839401 1244.617618 1315.342897 1442.523843 1333.825648 1610.955299 1852.245354 0.673091802 0.708456216 0.689196383 0.632118957 0.67195073 0.710134267 0.778797388 0.720112833 0.869731051 1 10.8550595 -8.50043885 0.718065548 1.00361861 0.676022129 0.90992057 0.031657548 0.206790384 0.243405218 0.032026999 0.012563241 3.16E-09 8.50043885 -0.327596481 AT(ph)PSENLVPSSAR ddPTM_A459_MK2206_30min_R2 1 ATPSENLVPSSAR 13 0 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 AT(0.894)PS(0.095)ENLVPS(0.006)S(0.006)AR 101.45 0.023628 31152000 26979 27442 27714 32298 32466 29438 31683 26522 20112 30964 TRUE FALSE 29044.53298 26079.27018 28637.97093 29659.15008 31191.22171 30558.28372 27522.98404 29988.51646 21861.30541 29953.64722 0.969649298 0.870654248 0.956076257 0.990168238 1.041316321 1.020185739 0.918852514 1.001164107 0.729837847 1 14.87044406 -8.177368094 24.99999319 0.864838836 0.970048546 0.236361685 0.076259758 105.4332338 31350.46369 0.049907584 0.018863292 6.65E-09 8.177368094 0.10520971 AT(ph)SGSSLPVGINR ddPTM_A459_MK2206_30min_R2 1 ATSGSSLPVGINR 13 0 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 AT(0.942)S(0.058)GSSLPVGINR 134.56 0.0028911 0 16028 30553 23920 28732 24317 28633 24320 20433 23401 25595 TRUE FALSE 17255.116 29035.78245 24717.48086 26384.50369 23362.1924 29722.64888 21126.75479 23103.66326 25436.37668 24759.83725 0.696899411 1.172696822 0.998289311 1.065617008 0.943551937 1.200437975 0.853267111 0.933110465 1.027324066 1 14.59571421 -10.31359086 16.05381946 0.99999475 0.995310398 0 0.139747349 0 0 0.12706821 0.030818568 4.86E-11 10.31359086 -0.004684352 AT(ph)SNVFAMFDQSQIQEFK ddPTM_A459_MK2206_30min_R1 4 ATSNVFAMFDQSQIQEFK 18 0 J3QRS3;P19105;O14950;J3KTJ1;P24844;P24844-2 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 1 AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK 144.63 0.00045578 189413500 22708.6 27258 27094.1 22853.3 23405.1 23575.9 25058.2 25568.7 22726.3 21884.6 TRUE FALSE 20777.11432 25483.49925 25255.02798 24613.46513 22472.82531 24910.74708 23386.6132 25345.15555 25088.78021 24595.82947 0.844741355 1.036090256 1.026801231 1.000717018 0.913684384 1.0128037 0.950836532 1.030465575 1.020042046 1 14.58612609 -7.771607736 24.98031278 1.018940366 0.974889231 0.129390389 0.055046183 479.9907442 1179160.889 0.029171411 0.014271043 1.69E-08 7.771607736 -0.044051135 AT(ph)SNVFAMFDQSQIQEFK ddPTM_A459_MK2206_30min_R2 6 ATSNVFAMFDQSQIQEFK 18 0 J3QRS3;P19105;O14950;J3KTJ1;P24844;P24844-2 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 1 AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.574)S(0.426)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK 200.87 2.03E-10 189761800 507081 660121 632390 628552 725588 633985 753049 555736 665386 617778 TRUE FALSE 545903.5112 627340.351 653473.567 577197.291 697097.7693 658111.7434 654172.7617 628372.6033 723260.0715 597619.9545 0.913462657 1.049731265 1.093460086 0.965826671 1.166456649 1.101221167 1.094630052 1.051458538 1.21023414 1 19.18886879 -3.675274744 0.868471145 1.094353112 3.05E-10 0.366705322 0.067443824 13.95984682 1.889764009 0.022209221 22.75282722 0.000211215 3.675274744 -1.094353112 AT(ph)SPLCTSTASMVSSSPSTPSNIPQKPSQPAAK ddPTM_A459_MK2206_30min_R2 1 ATSPLCTSTASMVSSSPSTPSNIPQKPSQPAAK 33 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 AT(0.656)S(0.289)PLCT(0.028)S(0.009)T(0.009)AS(0.009)MVSSSPSTPSNIPQKPSQPAAK 62.827 0.0002004 6077300 40141 54559 47746 49694 50868 43055 48579 41581 41618 48004 TRUE FALSE 43214.22582 51849.6794 49337.82781 45633.84124 48870.66673 44693.4882 42200.51895 47015.77947 45237.85841 46437.63341 0.930586308 1.116544397 1.062453536 0.982690932 1.052393568 0.962441126 0.908756882 1.012449947 0.974163735 1 15.50300683 -6.768727235 24.90990807 0.968415107 1.033094172 0.225396973 0.052736366 227.1660125 776448.7928 0.018217794 0.01639354 1.70E-07 6.768727235 0.064679065 AT(ph)SPLVSLYPALECR ddPTM_A459_MK2206_30min_R2 2 ATSPLVSLYPALECR 15 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3;Q96G74-4 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 AT(0.611)S(0.388)PLVSLYPALECR;AT(0.93)S(0.07)PLVSLYPALECR 209.39 3.30E-06 80201900 21313.1 24875.7 20502.7 23861 27645.5 24865.4 25767.5 19073.9 24267.2 27710.9 TRUE FALSE 22944.84732 23640.40891 21186.24978 21911.47997 26559.99876 25811.67022 22384.1963 21566.92422 26377.91719 26806.6956 0.855937176 0.881884484 0.790334255 0.817388323 0.990797193 0.962881461 0.835022587 0.804534977 0.984004802 1 14.71030577 -6.231986904 24.7847513 0.91670812 0.836346522 0.314320563 0.065785209 969.5270147 815872.9936 0.020568832 0.026550034 5.86E-07 6.231986904 -0.080361597 AT(ph)SPPLAGAVSPSVAVR ddPTM_A459_MK2206_30min_R1 1 ATSPPLAGAVSPSVAVR 17 0 H3BS19;Q96JG9 H3BS19 ZNF469 Zinc finger protein 469 1 AT(0.593)S(0.407)PPLAGAVSPSVAVR 129.29 0.0014641 0 761.23 759.2 702.14 588.72 903.05 835.89 1119.2 541.94 615.44 524.52 TRUE FALSE 696.4833911 709.775942 654.4806931 634.0633164 867.0796063 883.2173694 1044.54021 537.2018757 679.4171904 589.5014975 1.181478578 1.204027377 1.110227363 1.075592376 1.470869217 1.498244488 1.771904252 0.911281613 1.152528354 1 9.203351668 ATAGDTHLGGEDFDNR ddPTM_A459_MK2206_30min_R1 6 ATAGDTHLGGEDFDNR 16 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;P17066;P48741;Q53FA3;P34931 A0A0G2JIW1;P17066;Q53FA3 HSPA1B;HSPA1A;HSPA6;HSPA7;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 1-like 0 ;;;;; 302.63 4.62E-87 693271000 48775.4 47658.7 47220.4 41789.4 52813 44766 52158 48162.5 44550.7 40411.4 FALSE TRUE 44626.7961 44556.10997 44015.21081 45008.02683 50709.34638 47300.61223 48678.63499 47741.42034 49181.90469 45417.86932 0.982582335 0.981025985 0.969116594 0.990976184 1.116506501 1.041453792 1.071794774 1.051159402 1.082875648 1 15.47097241 -6.111213101 6.957123263 1.06262612 0.978283675 0.656683857 0.028322888 0.140294477 7.760158047 0.007760195 0.01007165 7.74E-07 6.111213101 -0.084342445 ATAGDTHLGGEDFDNR ddPTM_A459_MK2206_30min_R2 4 ATAGDTHLGGEDFDNR 16 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;P17066;P48741;Q53FA3;P34931 A0A0G2JIW1;P17066;Q53FA3 HSPA1B;HSPA1A;HSPA6;HSPA7;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 1-like 0 ;;; 151.99 0.0016991 323380000 592698 765596 678239 773356 782717 810049 754700 612205 689416 702377 FALSE TRUE 638075.4146 727577.6159 700851.1497 710170.341 751983.5977 840875.9823 655606.9834 692222.2955 749380.1575 679458.496 0.939094026 1.070819808 1.031484857 1.045200472 1.106739561 1.237567839 0.964896292 1.018785253 1.102907921 1 19.3740259 -4.760365345 24.99998932 1.066871266 0.939093875 0.216051786 0.071376313 43.7245626 1017291.507 0.018260087 0.108688278 1.74E-05 4.760365345 -0.127777392 ATANSQVMGS(ph)ANSTLR ddPTM_A459_MK2206_30min_R1 2 ATANSQVMGSANSTLR 16 0 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84;Q9NQ84-2 J9JIE0 GPRC5C G-protein coupled receptor family C group 5 member C 1 ATANS(0.017)QVMGS(0.982)ANS(0.001)TLR;ATANSQVMGS(0.93)ANS(0.064)T(0.006)LR 208.07 6.59E-08 14044400 4392.4 3526.6 2745 2689.1 4074 3752.1 4207.7 4182.2 4092 3838.6 TRUE FALSE 4018.803315 3297.017699 2558.677048 2896.214948 3911.723953 3964.540659 3927.01201 4145.635466 4517.378043 4314.154748 0.93153898 0.7642326 0.593088843 0.67132848 0.906718507 0.918961162 0.910262204 0.960938054 1.047106167 1 12.07486221 -6.406651716 4.165866661 0.957584384 0.732138852 0.596320992 0.08827239 0.179964773 5.265682054 0.030612919 0.034670428 3.92E-07 6.406651716 -0.225445531 ATANSQVMGS(ph)ANSTLR ddPTM_A459_MK2206_30min_R2 2 ATANSQVMGSANSTLR 16 0 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84;Q9NQ84-2 J9JIE0 GPRC5C G-protein coupled receptor family C group 5 member C 1 ATANSQVMGS(0.986)ANS(0.005)T(0.009)LR;ATANSQVMGS(0.966)ANS(0.017)T(0.017)LR 133.95 0.00049273 11177000 48579 43867.5 43635 46282 38114 49816 67215 38286 60156 52225 TRUE FALSE 52298.24559 41689.10374 45089.76912 42500.61255 36617.45285 51711.78279 58389.58976 43290.11166 65388.26014 50520.90253 1.035180351 0.825185253 0.8924973 0.841248086 0.724798074 1.023572031 1.155751122 0.856875263 1.294281315 1 15.62459279 -6.932168308 8.354225114 1.068320922 0.862425966 0.395124002 0.126343578 0.275297843 30.3472972 0.042366435 0.037345017 1.17E-07 6.932168308 -0.205894955 ATAPQTQHVS(ph)PMR ddPTM_A459_MK2206_30min_R1 26 ATAPQTQHVSPMR 13 0 P29692;E9PI39;E9PQ49;E9PK01;P29692-2;E9PRY8;A0A087X1X7;E9PL12;P29692-3;E9PL71;E9PPR1;P29692-4;E9PQZ1;E9PK06 P29692 EEF1D Elongation factor 1-delta 1 ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.001)QHVS(0.999)PMR;ATAPQT(0.001)QHVS(0.999)PMR;ATAPQT(0.009)QHVS(0.991)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.008)QHVS(0.992)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.01)QHVS(0.99)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.003)QHVS(0.997)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.233)QHVS(0.767)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.066)QHVS(0.934)PMR;ATAPQTQHVS(1)PMR 202.18 5.35E-05 13775764200 107603.89 101197 101923.4 89076.3 108926.36 98648.46 108379.99 98009.29 84289.2 79328.53 TRUE FALSE 98451.6141 94609.05691 95005.12358 95936.97206 104587.5924 104233.8506 101150.1586 97152.40511 93051.36397 89156.3472 1.10425805 1.061158963 1.065601346 1.076053193 1.173080725 1.169113067 1.134525604 1.089685795 1.043687487 1 16.44404989 -8.377294513 2.203960713 1.002067984 1.11127944 0.493274667 0.037114587 0.28849778 2.78747542 0.041202834 0.011569929 4.19E-09 8.377294513 0.109211456 ATAPQTQHVS(ph)PMR ddPTM_A459_MK2206_30min_R2 19 ATAPQTQHVSPMR 13 0 P29692;E9PI39;E9PQ49;E9PK01;P29692-2;E9PRY8;A0A087X1X7;E9PL12;P29692-3;E9PL71;E9PPR1;P29692-4;E9PQZ1;E9PK06 P29692 EEF1D Elongation factor 1-delta 1 ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.069)QHVS(0.931)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.002)QHVS(0.998)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.149)QHVS(0.851)PMR 181.75 0.00011587 13030616000 813619.9 1011772.2 827508.4 1090865.1 1014432.1 1039510.7 1064205.2 841072.3 879195.2 936731.3 TRUE FALSE 875911.2651 961529.0638 855097.117 1001737.932 974600.3986 1079070.008 924473.7789 951003.3374 955666.0093 906165.8344 0.966612547 1.061096134 0.943643078 1.105468661 1.075521016 1.190808533 1.020203746 1.049480461 1.054625956 1 19.78941557 -5.772616708 24.99998839 1.076014122 0.997515133 0.292778731 0.056568304 266.5363611 596153.3346 0.015852732 0.023759516 1.69E-06 5.772616708 -0.078498989 ATAPQTQHVSPMR ddPTM_A459_MK2206_30min_R1 2 ATAPQTQHVSPMR 13 0 P29692;E9PI39;E9PQ49;E9PK01;P29692-2;E9PRY8;A0A087X1X7;E9PL12;P29692-3;E9PL71;E9PPR1;P29692-4;E9PQZ1;E9PK06 P29692 EEF1D Elongation factor 1-delta 0 ; 110.25 0.0079479 2338500 2116.06 2049.55 1879.26 1751.45 2517.55 2655.67 2570.83 2494.01 1769.72 1626.3 FALSE TRUE 1936.077985 1916.123922 1751.701067 1886.346982 2417.270652 2806.03174 2399.334621 2472.205134 1953.688727 1827.778322 1.059252078 1.048334965 0.958377198 1.032043635 1.322518504 1.535214477 1.312705481 1.352573834 1.068887131 1 10.83587539 -6.256452849 21.63371408 1.298809631 1.021480998 0.389061651 0.144196412 59.8932219 259838.4808 0.043037005 0.05360713 5.54E-07 6.256452849 -0.277328633 ATAPVQS(ph)EVLVMQSEY(ph)R ddPTM_A459_MK2206_30min_R1 1 ATAPVQSEVLVMQSEYR 17 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 2 ATAPVQS(1)EVLVMQS(0.124)EY(0.876)R 110.22 0.0016165 109090000 3165.3 3549.9 3616.2 3285 4356.2 3403.5 3463.4 3569.8 2349.4 1316.1 TRUE FALSE 2896.074613 3318.800865 3370.742419 3538.011269 4182.68333 3596.203229 3232.362905 3538.589615 2593.628537 1479.148404 1.957933772 2.243724062 2.278839912 2.391924475 2.827764488 2.431266003 2.18528641 2.392315474 1.75346066 1 10.53055109 -8.561747319 2.231340494 1.000736068 2.354019726 0.797572457 0.210975347 0.153229855 1.778998585 0.217935205 0.059907846 2.74E-09 8.561747319 1.353283658 ATAPVQS(ph)EVLVMQSEY(ph)R ddPTM_A459_MK2206_30min_R2 1 ATAPVQSEVLVMQSEYR 17 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 2 ATAPVQS(1)EVLVMQS(0.133)EY(0.867)R 79.471 0.013241 17125000 19144 33619 30728 29725 27412 40908 35245 27674 26447 34668 TRUE FALSE 20609.67936 31949.52935 31752.45618 27296.37241 26335.66715 42464.78261 30617.28916 31291.08682 28747.31225 33536.786 0.61453949 0.952671176 0.946794847 0.813923326 0.785277013 1.266215033 0.912946433 0.933037734 0.857187455 1 15.03345681 ATASS(ph)PTQQDGR ddPTM_A459_MK2206_30min_R1 2 ATASSPTQQDGR 12 0 Q9BV73;Q9BV73-2 Q9BV73 CEP250 Centrosome-associated protein CEP250 1 ATAS(0.379)S(0.596)PT(0.025)QQDGR;ATAS(0.219)S(0.749)PT(0.032)QQDGR 157.33 0.00044373 4101400 3132.1 3303 3001 2568.7 3019.7 2670.6 3218.9 2870.2 1177.37 2031.57 TRUE FALSE 2865.698448 3087.9741 2797.300481 2766.541719 2899.418955 2821.807064 3004.173054 2845.106144 1299.761825 2283.256229 1.255092797 1.352443086 1.225136472 1.211665026 1.269861401 1.235869644 1.315740658 1.246073966 0.569257978 1 11.15687705 -8.242331672 24.22547392 0.784629073 1.264878896 0.771722254 0.104283599 188.505329 238995.2979 0.06407264 0.024121338 5.72E-09 8.242331672 0.480249823 ATASS(ph)PTQQDGR ddPTM_A459_MK2206_30min_R2 2 ATASSPTQQDGR 12 0 Q9BV73;Q9BV73-2 Q9BV73 CEP250 Centrosome-associated protein CEP250 1 ATAS(0.027)S(0.939)PT(0.034)QQDGR;ATAS(0.022)S(0.969)PT(0.01)QQDGR 174.94 0.00012235 13806100 49972 58819 45188 55395 50901 53438 57939 50317 46752 54371 TRUE FALSE 53797.89474 55898.13399 46694.54537 50869.0513 48902.37098 55471.62054 50331.5397 56893.60466 50818.40445 52596.87872 1.022834359 1.062765231 0.88778168 0.967149621 0.929758042 1.054656129 0.956930162 1.081691653 0.966186696 1 15.68268957 -6.764029586 24.99992033 1.013563475 0.973809078 0.101169706 0.056274463 169.6003056 1636918.447 0.019599586 0.018082113 1.72E-07 6.764029586 -0.039754398 ATAVMPDGQFK ddPTM_A459_MK2206_30min_R1 1 ATAVMPDGQFK 11 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 191.4 0.00027664 10159000 5178.4 5612.4 5555.3 5795.7 5487.7 5981.8 5897.2 5421.8 5237.1 4835.9 FALSE TRUE 4737.949887 5247.03174 5178.221714 6242.085818 5269.113289 6320.484347 5503.808548 5374.397774 5781.515286 5435.007801 0.871746658 0.965413838 0.952753318 1.148496202 0.969476674 1.162920934 1.012658813 0.988848217 1.063754736 1 12.40806639 -5.22275933 1.721116678 1.047537019 0.884456125 0.402143242 0.065564174 0.45423048 2.245065242 0.018163167 0.090962789 5.99E-06 5.22275933 -0.163080894 ATAVMPDGQFK ddPTM_A459_MK2206_30min_R2 1 ATAVMPDGQFK 11 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 134.68 0.021937 6054500 34779 56405 54240 57155 54445 44953 51695 48595 46899 42996 FALSE TRUE 37441.70698 53604.00972 56048.33453 52485.25367 52307.21574 46663.71792 44907.3844 54946.53335 50978.19025 41593.04404 0.900191555 1.288773422 1.347541057 1.261875751 1.257595277 1.121911584 1.079684967 1.321051022 1.225642206 1 15.34405465 -6.754613305 24.98752427 1.165350332 1.225895632 0.036005051 0.138411649 640.8398034 2345856.314 0.047033687 0.04601179 1.76E-07 6.754613305 0.0605453 ATCAPQHGAPGPGPADASK ddPTM_A459_MK2206_30min_R2 4 ATCAPQHGAPGPGPADASK 19 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 ;;; 150.23 3.88E-05 9790500 46020.2 50499.2 48871 52090 57954.7 51361 53043.7 40250.2 48469.7 47597.8 FALSE TRUE 49543.5419 47991.48316 50500.33475 47834.08037 55679.10728 53315.57885 46078.99847 45511.03934 52685.50689 46044.68768 1.075988228 1.042280566 1.096767885 1.038862088 1.209240633 1.157909447 1.000745163 0.988410208 1.144225524 1 15.4907471 -11.22372406 2.55062158 0.985814279 1.082279565 0.123162223 0.066985147 24605729.41 18250748.85 2229938.242 0.018543335 5.97E-12 11.22372406 0.096465286 ATCIS(ph)PGVVETQFAFK ddPTM_A459_MK2206_30min_R2 2 ATCISPGVVETQFAFK 16 0 A0A087WZN3;Q6UWP2-2;Q6UWP2 A0A087WZN3 DHRS11 Dehydrogenase/reductase SDR family member 11 1 AT(0.002)CIS(0.994)PGVVET(0.005)QFAFK;AT(0.116)CIS(0.552)PGVVET(0.333)QFAFK 118.31 0.0017728 1784600 15476.3 19690.7 18114.8 22946.9 18488 20004.2 18626 13659.5 18812.9 18116.8 TRUE FALSE 16661.17743 18712.88847 18718.73839 21072.06487 17762.06823 20765.47385 16180.38383 15444.84355 20449.21204 17525.6503 0.950673849 1.067742888 1.06807668 1.202355662 1.013489823 1.184861816 0.923240139 0.881270782 1.166816163 1 14.09718036 -7.277409258 24.98978403 0.982937674 1.082421243 0.16123682 0.097678482 1403.707139 2196522.32 0.040062498 0.027115507 5.28E-08 7.277409258 0.099483569 ATDEDMQS(ph)LASLMSMK ddPTM_A459_MK2206_30min_R2 1 ATDEDMQSLASLMSMK 16 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;B5MC86;C9K0H9 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 ATDEDMQS(0.999)LAS(0.001)LMSMK 176.85 6.70E-09 0 7111.4 6811.1 4948.5 7617.8 7849.6 6282.4 6610.5 5941.6 5367.7 5808.7 TRUE FALSE 7655.854252 6472.870678 5113.48052 6995.401372 7541.385263 6521.481134 5742.533409 6718.187521 5834.572843 5619.162595 1.362454658 1.151927991 0.910007574 1.244918839 1.342083475 1.160578827 1.021955374 1.19558518 1.038334938 1 12.45613943 -8.223091979 0.789354287 1.000801827 1.182897697 0.196628189 0.127287566 1.192294606 1.599015561 0.128851898 0.050707255 5.98E-09 8.223091979 0.18209587 ATDEDMQSLAS(ph)LMSMK ddPTM_A459_MK2206_30min_R1 1 ATDEDMQSLASLMSMK 16 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;B5MC86;C9K0H9 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 ATDEDMQS(0.494)LAS(0.506)LMSMK 209.33 5.53E-08 10642000 2632.5 2147 2246.6 2021 2185.1 2119.4 1952.8 1633.5 1730.2 1679.1 TRUE FALSE 2408.592051 2007.22991 2094.107051 2176.65777 2098.06284 2239.398596 1822.532275 1619.218482 1910.060482 1887.119585 1.276332497 1.063647437 1.10968434 1.153428637 1.111780545 1.186675511 0.96577466 0.858037029 1.012156568 1 10.88197013 -7.311066642 6.641936828 0.945682148 1.142803043 0.666000368 0.065996066 0.13687439 14.71677129 0.026630457 0.01797813 4.89E-08 7.311066642 0.197120895 ATDIPASAS(ph)PPPVAGVPFFK ddPTM_A459_MK2206_30min_R1 2 ATDIPASASPPPVAGVPFFK 20 0 Q8N1G0;Q8N1G0-2;F8WCX2 Q8N1G0 ZNF687 Zinc finger protein 687 1 ATDIPAS(0.025)AS(0.975)PPPVAGVPFFK;ATDIPAS(0.202)AS(0.798)PPPVAGVPFFK 192.85 1.60E-15 133811000 22127.2 22971 22121 18292.4 22191 20098.1 24539 19294 19596.8 18926.1 TRUE FALSE 20245.16545 21475.58372 20619.48815 19701.28382 21307.08548 21236.03705 22902.04808 19125.31459 21633.95749 21270.80815 0.951781677 1.009627071 0.969379631 0.926212285 1.001705498 0.998365314 1.076689138 0.899134366 1.017072663 1 14.37658723 ATDIPASAS(ph)PPPVAGVPFFK ddPTM_A459_MK2206_30min_R2 2 ATDIPASASPPPVAGVPFFK 20 0 Q8N1G0;Q8N1G0-2;F8WCX2 Q8N1G0 ZNF687 Zinc finger protein 687 1 ATDIPAS(0.009)AS(0.991)PPPVAGVPFFK;AT(0.013)DIPAS(0.199)AS(0.788)PPPVAGVPFFK 152.68 8.17E-06 72051100 308378 371580 310532 386710 354630 337193 357105 316274 301943 356631 TRUE FALSE 331987.6568 353127.8775 320884.9819 355114.556 340705.4443 350025.1159 310216.6845 357612.0977 328205.4564 344994.1597 0.962299353 1.023576393 0.930117142 1.029334979 0.987568731 1.014582729 0.899194018 1.036574353 0.951336268 1 18.39621241 ATDS(ph)FSGR ddPTM_A459_MK2206_30min_R1 2 ATDSFSGR 8 0 Q9HBH9;K7EK27;Q9HBH9-2 Q9HBH9 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 1 AT(0.001)DS(0.999)FS(0.001)GR;ATDS(0.999)FS(0.001)GR 109.83 0.012283 7102900 3344.6 3496 3478.6 2476.8 4344.6 4562.9 5098.4 4299.8 3553.5 4584.2 TRUE FALSE 3060.124207 3268.409765 3242.482324 2667.563565 4171.545382 4821.247455 4758.295039 4262.207302 3922.899041 5152.125305 0.593953762 0.634380876 0.629348498 0.517759838 0.809674675 0.935778377 0.923559649 0.827271669 0.761413749 1 12.33095197 -6.409199808 4.693049266 0.880300853 0.600600627 0.810297439 0.06764851 0.102010429 3.513559951 0.021940168 0.024827632 3.90E-07 6.409199808 -0.279700227 ATDS(ph)FSGR ddPTM_A459_MK2206_30min_R2 1 ATDSFSGR 8 0 Q9HBH9;K7EK27;Q9HBH9-2 Q9HBH9 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 1 AT(0.007)DS(0.993)FS(0.001)GR 96.171 0.021294 4633200 20942 26945 24395 26363 24793 32218 32241 26734 35309 34212 TRUE FALSE 22545.33562 25606.95048 25208.31712 24209.05857 23819.50225 33444.07857 28007.71797 30228.22559 38380.113 33095.66524 0.681217176 0.773725208 0.761680327 0.731487293 0.719716678 1.010527461 0.846265448 0.913359057 1.1596719 1 15.01435465 -7.202777245 0.746287149 1.050573417 0.722896069 0.686573997 0.083107301 0.405937915 0.451065703 0.06830007 0.044977116 6.27E-08 7.202777245 -0.327677349 ATDSDLSS(ph)PR ddPTM_A459_MK2206_30min_R1 1 ATDSDLSSPR 10 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 1 ATDSDLS(0.002)S(0.998)PR 161.19 0.00042956 18162000 7577.1 7387.1 8124.1 6447.3 8985.7 7548.5 7946.8 7783.3 6896.8 6157.9 TRUE FALSE 6932.627856 6906.198447 7572.658727 6943.872163 8627.780541 7975.889547 7416.683472 7715.251429 7613.74704 6920.787142 1.001710891 0.997892047 1.094190382 1.003335606 1.246647291 1.152454104 1.071653169 1.11479392 1.100127324 1 12.75672042 -5.558216789 1.495137627 1.114665644 0.997921554 0.245169535 0.067312545 0.585105702 2.491761511 0.021216677 0.064836188 2.77E-06 5.558216789 -0.11674409 ATEDGEEDEVS(ph)AGEK ddPTM_A459_MK2206_30min_R2 1 ATEDGEEDEVSAGEK 15 0 Q9BXW9 Q9BXW9 FANCD2 Fanconi anemia group D2 protein 1 ATEDGEEDEVS(1)AGEK 157.8 0.00016548 0 16510 12797 10454 12796 6687.5 7785.5 10663 8277.5 8338.2 15208 TRUE FALSE 17774.01829 12161.51959 10802.53114 11750.52587 6424.915148 8081.782658 9262.935291 9359.397671 9063.441564 14711.76421 1.208150025 0.826652699 0.734278431 0.7987163 0.436719557 0.549341503 0.62962777 0.636184589 0.61606762 1 13.84468264 -3.807712794 0.910873046 0.634795824 3.76517626 0.558036124 0.143245415 7.220264968 1.245949121 0.046126658 34.09290893 0.000155699 3.807712794 3.130380436 ATEMVEVGADDDEGGAER ddPTM_A459_MK2206_30min_R2 3 ATEMVEVGADDDEGGAER 18 0 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 0 ;; 201.3 2.62E-13 4804300 35151.1 33263.2 31191.6 36995.2 32003.2 28452 35784 30349.3 26724.7 36450.4 FALSE TRUE 37842.29524 31611.39786 32231.51238 33972.57382 30746.59356 29534.7608 31085.51782 34316.05771 29049.1661 35261.02643 1.073204585 0.896496814 0.914083214 0.963459583 0.871971031 0.837603547 0.881582896 0.97320076 0.823832118 1 15.10578685 -4.759893071 24.98975685 0.904018457 1.073204794 0.452168648 0.05482787 35.17280887 568237.9653 0.013171368 0.081136241 1.74E-05 4.759893071 0.169186337 ATEMVEVGADDDEGGAERGEAGDLR ddPTM_A459_MK2206_30min_R1 2 ATEMVEVGADDDEGGAERGEAGDLR 25 1 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 0 ; 175.65 7.44E-20 9827900 1180.59 1414.74 1325.26 1266.08 1526.43 1400.15 1593.49 1255.74 971.02 648.9 FALSE TRUE 1080.174621 1322.640169 1235.305044 1363.593701 1465.629061 1479.425283 1487.19119 1244.761198 1071.961004 729.2906309 1.481130533 1.813598191 1.693844664 1.869753488 2.00966391 2.028581227 2.039229803 1.706810899 1.469868059 1 9.51035005 -8.521055277 1.864354071 1.006567852 1.853372503 0.719679175 0.163217559 0.198506815 1.56020052 0.16863539 0.047743041 3.01E-09 8.521055277 0.846804651 ATENDIANFFS(ph)PLNPIR ddPTM_A459_MK2206_30min_R1 2 ATENDIANFFSPLNPIR 17 0 P31942;P31942-4;P31942-3;P31942-2;P31942-5;P31942-6 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 1 ATENDIANFFS(1)PLNPIR;ATENDIANFFS(1)PLNPIR 206.62 5.81E-09 69159000 4007 4208.9 3892.2 3584.5 4562.6 4016.7 4763.4 4514.1 3302.1 3842.7 TRUE FALSE 3666.183608 3934.899845 3628.008308 3860.578811 4380.861981 4244.122083 4445.642277 4474.6337 3645.365112 4318.762687 0.84889675 0.911117403 0.840057343 0.893908531 1.014378955 0.982717132 1.02937869 1.03609159 0.844076273 1 12.07640233 -6.156694695 4.80474259 0.988188405 0.870813336 0.508570192 0.05367612 0.185511712 6.786176895 0.015783433 0.020627651 6.97E-07 6.156694695 -0.117375069 ATENDIYNFFS(ph)PLNPVR ddPTM_A459_MK2206_30min_R1 1 ATENDIYNFFSPLNPVR 17 0 P52597;P31943;G8JLB6;E9PCY7;H0YB39;H0YBD7;H0YBG7 P52597;P31943 HNRNPF;HNRNPH1 "Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed" 1 ATENDIYNFFS(1)PLNPVR 162.81 1.41E-05 76931000 1053.3 1046.3 1010.7 849.1 1357.7 877.42 1339.9 1036.8 812.25 875.73 TRUE FALSE 963.7113039 978.1856798 942.0965 914.4978291 1303.619934 927.0987621 1250.517716 1027.735367 896.6862942 984.2220438 0.979160455 0.993866868 0.957199146 0.929158044 1.324518123 0.941960981 1.270564629 1.04421088 0.911060974 1 9.942840019 ATENDIYNFFSPLNPVR ddPTM_A459_MK2206_30min_R1 1 ATENDIYNFFSPLNPVR 17 0 P52597;P31943;G8JLB6;E9PCY7;H0YB39;H0YBD7;H0YBG7 P52597;P31943 HNRNPF;HNRNPH1 "Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed" 0 226.23 4.98E-15 11430000 2977.1 2665.1 2796.2 2461.2 3151.7 2440.2 2409.7 2587.8 2190.7 2362.2 FALSE TRUE 2723.882012 2491.601506 2606.401735 2650.76205 3026.161115 2578.362015 2248.95331 2565.175137 2418.431104 2654.84717 1.026003321 0.938510335 0.981752081 0.99846126 1.139862644 0.971190374 0.847112156 0.966223279 0.910949275 1 11.3744131 -7.001049383 24.99903267 0.925527131 1.014177277 0.308152722 0.060435376 48.72523256 1160793.683 0.021969618 0.019134679 9.98E-08 7.001049383 0.088650146 ATEPPS(ph)PDAGELSLASR ddPTM_A459_MK2206_30min_R1 2 ATEPPSPDAGELSLASR 17 0 Q8IYB8 Q8IYB8 SUPV3L1 "ATP-dependent RNA helicase SUPV3L1, mitochondrial" 1 ATEPPS(1)PDAGELSLASR;ATEPPS(1)PDAGELSLASR 228.99 2.60E-16 18812500 3490.2 3272.9 2753.5 2997.9 3666 3063.1 3097.6 2750.59 2428.1 3049.4 TRUE FALSE 3193.340162 3059.833615 2566.600092 3228.798777 3519.975457 3236.530075 2890.964756 2726.541882 2680.509684 3427.182694 0.931768291 0.892813103 0.748895032 0.942114578 1.027075523 0.944370454 0.843539728 0.795563623 0.782132125 1 11.74280738 -11.08363664 5.61812666 1.000408837 0.879976159 0.163452498 0.082281255 0.000465461 3.64E-05 0.088008671 0.021273368 8.25E-12 11.08363664 -0.120432678 ATEPPS(ph)PDAGELSLASR ddPTM_A459_MK2206_30min_R2 2 ATEPPSPDAGELSLASR 17 0 Q8IYB8 Q8IYB8 SUPV3L1 "ATP-dependent RNA helicase SUPV3L1, mitochondrial" 1 ATEPPS(1)PDAGELSLASR;ATEPPS(1)PDAGELSLASR 199.61 6.00E-08 8178000 24145.4 28206 28931 24109 23950 24038 26150.1 19959.7 30379 24231 TRUE FALSE 25993.99039 26805.33106 29895.5451 22139.21758 23009.60266 24952.78293 22716.56046 22568.50132 33021.31051 23440.34445 1.108942338 1.143555339 1.275388472 0.94449199 0.981623914 1.064522878 0.969122297 0.962805874 1.408738279 1 14.51670615 -5.763190749 24.99951422 1.040499618 1.172721367 0.162612455 0.13307551 82.67088997 1180095.312 0.036713138 0.057790376 1.73E-06 5.763190749 0.132221749 ATEVSKT(ph)PEAR ddPTM_A459_MK2206_30min_R1 2 ATEVSKTPEAR 11 1 Q5H909;Q9UNF1-2;Q9UNF1 Q5H909 MAGED2 Melanoma-associated antigen D2 1 ATEVS(0.004)KT(0.996)PEAR;ATEVSKT(1)PEAR 195.71 0.00020518 49940000 8960.5 9025.3 9401.1 8441.6 7780.1 6150.8 7547.8 8760.6 6931.7 7013.1 TRUE FALSE 8198.362422 8437.75133 8762.979525 9091.773495 7470.202142 6499.052981 7044.300034 8684.006998 7652.27502 7881.935774 1.040145804 1.070517646 1.111780123 1.153494999 0.947762372 0.82455036 0.893727155 1.10176069 0.970862392 1 12.94433428 -6.276237889 24.45523289 0.951801343 1.093579532 0.465109781 0.072155471 586.4281095 969097.9452 0.024713176 0.028144872 5.29E-07 6.276237889 0.14177819 ATFSGS(ph)AGR ddPTM_A459_MK2206_30min_R2 1 ATFSGSAGR 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 ATFS(0.038)GS(0.961)AGR 80.916 0.045196 14191000 21792 29683 23103 45392 39127 50049 36315 32552 31144 31516 TRUE FALSE 23460.41228 28208.98538 23873.24249 41683.3284 37590.67738 51953.64977 31546.79688 36806.65817 33852.84882 30487.6355 0.769505798 0.925259861 0.783046704 1.367220767 1.232981068 1.70408918 1.034740686 1.207265095 1.11037961 1 14.89593664 -5.756598972 24.99994974 1.25621273 0.835869602 0.489071529 0.191572174 100.4189484 518640.333 0.052687698 0.087644436 1.75E-06 5.756598972 -0.420343128 ATGAALT(ph)PTEER ddPTM_A459_MK2206_30min_R1 1 ATGAALTPTEER 12 0 M0R300;M0R0P8;Q13459-2;Q13459 M0R300 MYO9B Unconventional myosin-IXb 1 ATGAALT(0.896)PT(0.104)EER 142.39 0.002134 7701500 3204.6 2805.8 2972.1 2732.3 3785.6 3495.4 3400.5 3036.2 2991.7 3043.4 TRUE FALSE 2932.031942 2623.14191 2770.362133 2942.742219 3634.811536 3693.306527 3173.65885 3009.654824 3302.697921 3420.439368 0.857209155 0.766902034 0.809943354 0.860340413 1.062673869 1.07977547 0.927851223 0.879902989 0.965577098 1 11.73996594 -6.068596483 5.171392958 0.98137413 0.810477158 0.654151388 0.058535909 0.151022216 7.710271227 0.019662038 0.026082815 8.54E-07 6.068596483 -0.170896972 ATGAALT(ph)PTEER ddPTM_A459_MK2206_30min_R2 1 ATGAALTPTEER 12 0 M0R300;M0R0P8;Q13459-2;Q13459 M0R300 MYO9B Unconventional myosin-IXb 1 ATGAALT(0.897)PT(0.103)EER 113.25 0.014112 12841000 34257 40435 38531 48676 49191 64214 59491 33957 41774 43681 TRUE FALSE 36879.74226 38427.0567 39815.60431 44699.01509 47259.51418 66657.70877 51679.76024 38395.29649 45407.42701 42255.69255 0.872775715 0.909393608 0.942254213 1.057822329 1.118417693 1.577484707 1.223024807 0.908641988 1.074587216 1 15.36685809 -5.901764117 2.179028171 1.168609882 0.898324161 0.296226807 0.166813542 0.414858595 4.00291857 0.057199427 0.096597117 1.25E-06 5.901764117 -0.270285722 ATGAALTPT(ph)EER ddPTM_A459_MK2206_30min_R1 1 ATGAALTPTEER 12 0 M0R300;M0R0P8;Q13459-2;Q13459 M0R300 MYO9B Unconventional myosin-IXb 1 ATGAALT(0.415)PT(0.585)EER 116.19 0.011863 8225200 2366.2 2503.3 2620.3 2325.4 3216.6 2872.8 2893.8 2625.8 2615.9 2642.8 TRUE FALSE 2164.942265 2340.334715 2442.441337 2504.502711 3088.476011 3035.455453 2700.759882 2602.842907 2887.832166 2970.210016 0.728885248 0.78793577 0.822312673 0.843207281 1.039817385 1.021966607 0.909282464 0.876316117 0.972265311 1 11.53634923 -6.003849982 3.121605879 0.963031386 0.780921765 0.7365195 0.051686659 0.148794886 2.986976807 0.01727544 0.025379829 9.91E-07 6.003849982 -0.182109621 ATGDGS(ph)SPELPSLER ddPTM_A459_MK2206_30min_R2 1 ATGDGSSPELPSLER 15 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 ATGDGS(0.5)S(0.5)PELPSLER 97.223 0.0096661 6399200 34503 39096 36151 41514 40800 39719 38394 34753 36806 35938 TRUE FALSE 37144.57621 37154.54949 37356.2563 38122.1734 39197.987 41230.53438 33352.82168 39295.33642 40007.31935 34765.346 1.068436834 1.068723708 1.074525658 1.096556709 1.127501708 1.185966461 0.959369761 1.130301894 1.150781567 1 15.08536233 -5.721156717 4.255422527 1.098220695 1.069477949 0.020777515 0.064249429 0.875440306 34.06013556 0.017917347 0.030991427 1.90E-06 5.721156717 -0.028742746 ATGDGSS(ph)PELPSLER ddPTM_A459_MK2206_30min_R1 2 ATGDGSSPELPSLER 15 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 ATGDGS(0.029)S(0.971)PELPSLER;ATGDGS(0.229)S(0.771)PELPSLER 183.28 2.08E-05 18173500 5857.7 6432.5 6693.5 5517.7 7024 6201.5 6322.5 6375.4 5790.9 5330.8 TRUE FALSE 5359.471855 6013.743081 6239.163869 5942.67421 6744.219206 6552.623571 5900.737561 6319.66055 6392.884778 5991.219749 0.894554378 1.00375939 1.041384581 0.991897219 1.125683832 1.093704428 0.984897535 1.054820356 1.067042279 1 12.54863404 -3.889352757 1.052578208 1.050650035 0.164334543 0.53568697 0.042320157 7.685795844 1.714819299 0.013502012 11.93908832 0.000129017 3.889352757 -0.886315491 ATGDGSS(ph)PELPSLER ddPTM_A459_MK2206_30min_R2 1 ATGDGSSPELPSLER 15 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 ATGDGS(0.046)S(0.954)PELPSLER 201.3 1.62E-05 5578000 33003 37870 36190 46748 37027 36057 39536 29938 30118 37590 TRUE FALSE 35529.73506 35989.43087 37396.55654 42928.53886 35573.13393 37429.1744 34344.87571 33850.99939 32737.6092 36363.44138 0.977072953 0.989714656 1.028410819 1.180541149 0.978266429 1.029307815 0.944489146 0.930907475 0.90028908 1 15.15020112 -7.240850313 2.455212935 0.934964593 1.035673313 0.331306248 0.059529011 0.34970038 4.149801235 0.028991024 0.019517618 5.74E-08 7.240850313 0.10070872 ATGEPGTFVCTSHLPAAAS(ph)ASPK ddPTM_A459_MK2206_30min_R1 2 ATGEPGTFVCTSHLPAAASASPK 23 0 Q8IY33;Q8IY33-4;Q8IY33-2 Q8IY33 MICALL2 MICAL-like protein 2 1 ATGEPGTFVCTSHLPAAAS(0.91)AS(0.09)PK;ATGEPGTFVCTSHLPAAAS(0.756)AS(0.244)PK 157.2 1.21E-09 73354000 15548.6 17994.2 18505.6 15076.9 12066.5 9983.4 13789.7 14690.3 17176.3 16170 TRUE FALSE 14226.10992 16822.77431 17249.49143 16238.12545 11585.86575 10548.65148 12869.81427 14561.86426 18961.83785 18173.26168 0.782804439 0.925688223 0.949168715 0.893517396 0.63752264 0.580448995 0.708173057 0.801279622 1.04339211 1 14.14952975 -10.81110953 10.47245287 1.000000007 0.807699537 0.141449309 0.137120399 2.41E-08 1.57E-09 0.147319096 0.035730127 1.54E-11 10.81110953 -0.19230047 ATGEPGTFVCTSHLPAAAS(ph)ASPK ddPTM_A459_MK2206_30min_R2 4 ATGEPGTFVCTSHLPAAASASPK 23 0 Q8IY33;Q8IY33-4;Q8IY33-2 Q8IY33 MICALL2 MICAL-like protein 2 1 ATGEPGTFVCTSHLPAAAS(0.921)AS(0.079)PK;ATGEPGTFVCTSHLPAAAS(0.85)AS(0.15)PK;ATGEPGTFVCTSHLPAAAS(0.732)AS(0.268)PK;ATGEPGTFVCTSHLPAAAS(0.518)AS(0.482)PK 148.17 7.39E-08 78718900 176571 190381 202133 166213 163251 131171 204627 162614 141685 197032 TRUE FALSE 190089.4115 180926.9564 208872.0133 152632.8662 156840.9455 136162.8043 177759.2291 183868.2081 154008.5052 190602.862 0.997306177 0.949235255 1.095849302 0.800790002 0.822867736 0.714379642 0.93261574 0.964666565 0.808007307 1 17.54021026 -5.768961593 24.99848306 0.856854607 1.007640752 0.383363285 0.087255999 175.7902995 584203.1426 0.025054888 0.037987466 1.70E-06 5.768961593 0.150786145 ATGHSGGGCISQGR ddPTM_A459_MK2206_30min_R2 3 ATGHSGGGCISQGR 14 0 I3L407;I3L3W5;I3L139;Q9HA64 I3L407 FN3KRP Ketosamine-3-kinase 0 ;; 99.834 0.013228 1302630 1503.13 4100.81 2465.71 2988.26 3894.88 2910.32 2338.53 1585.94 3083.76 1464.62 FALSE TRUE 1618.210789 3897.169739 2547.915541 2744.109599 3741.947441 3021.074267 2031.478202 1793.227803 3351.979871 1416.829569 1.142135105 2.75062705 1.798321828 1.936795828 2.641070967 2.132277821 1.433819738 1.265662323 2.365831391 1 10.46845051 -9.667896969 0.35632062 0.788469973 2.077689281 0.210068371 0.528133865 8.596104041 1.381379126 3.167090365 0.448655386 2.15E-10 9.667896969 1.289219308 ATGNDLRPPPPSPS(ph)SDLTHPMK ddPTM_A459_MK2206_30min_R2 1 ATGNDLRPPPPSPSSDLTHPMK 22 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 ATGNDLRPPPPS(0.053)PS(0.692)S(0.248)DLT(0.007)HPMK 62.792 0.0043806 9519600 31634 38101 32004 34979 41351 36303 34597 25256 29925 34072 TRUE FALSE 34055.92336 36208.95974 33070.99739 32121.10381 39727.35197 37684.5361 30054.37234 28557.04592 32527.82241 32960.23343 1.033242784 1.098565027 1.003360533 0.97454115 1.205311608 1.143333411 0.911837363 0.866409092 0.986880826 1 15.00843884 -7.273894181 24.88725013 0.930149234 1.075310994 0.456009303 0.071878274 683.7699557 1366306.372 0.031810425 0.021611474 5.32E-08 7.273894181 0.145161761 ATGPEAAGGGGAGGGGGGYRPIIQS(ph)PGYK ddPTM_A459_MK2206_30min_R1 2 ATGPEAAGGGGAGGGGGGYRPIIQSPGYK 29 1 Q9ULL5;Q9ULL5-2 Q9ULL5 PRR12 Proline-rich protein 12 1 ATGPEAAGGGGAGGGGGGY(0.098)RPIIQS(0.89)PGY(0.013)K;ATGPEAAGGGGAGGGGGGY(0.08)RPIIQS(0.841)PGY(0.079)K 54.308 0.0043215 25815400 2399.3 2571 2424.8 2470.9 2571.1 1719.54 2151.88 2087.11 1607.6 1813.02 TRUE FALSE 2195.226936 2403.627433 2260.211332 2661.209146 2468.687643 1816.898869 2008.332012 2068.862617 1774.715773 2037.630605 1.077342935 1.179618831 1.109235072 1.306031201 1.211548176 0.891672349 0.985621244 1.015327612 0.870970316 1 10.99267682 -6.756319941 24.99882672 0.955732705 1.180345235 0.71436074 0.070802647 71.09545856 347167.4088 0.024194271 0.023495254 1.75E-07 6.756319941 0.22461253 ATGPEAAGGGGAGGGGGGYRPIIQS(ph)PGYK ddPTM_A459_MK2206_30min_R2 2 ATGPEAAGGGGAGGGGGGYRPIIQSPGYK 29 1 Q9ULL5;Q9ULL5-2 Q9ULL5 PRR12 Proline-rich protein 12 1 ATGPEAAGGGGAGGGGGGY(0.119)RPIIQS(0.867)PGY(0.014)K;ATGPEAAGGGGAGGGGGGY(0.011)RPIIQS(0.978)PGY(0.011)K 55.964 0.0036533 69778000 103163 120056 97773 120961 114832 89108 133563 81515 80749 124909 TRUE FALSE 111061.2386 114094.1936 101032.703 111078.0994 110323.1187 92499.06738 116026.0177 92169.29038 87772.40206 120833.2296 0.919128281 0.94422862 0.836133433 0.919267819 0.913019697 0.765510181 0.960216143 0.762780989 0.726392917 1 16.88265773 -6.711786329 24.9996878 0.835480803 0.905275859 0.120114712 0.084529542 223.3410694 112448.4372 0.027213516 0.027213478 1.94E-07 6.711786329 0.069795056 ATHGSNS(ph)LPSSAR ddPTM_A459_MK2206_30min_R1 2 ATHGSNSLPSSAR 13 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0J9YYG8;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 ATHGS(0.012)NS(0.987)LPSSAR;ATHGS(0.001)NS(0.998)LPS(0.001)SAR 238.64 1.07E-17 19037400 3032.9 910.38 1193.49 1041.56 3507.8 3541.9 3181.9 2087.58 968 966.53 TRUE FALSE 2774.935929 851.1140965 1112.479224 1121.781132 3368.076898 3742.439317 2969.641257 2069.328508 1068.627064 1086.271033 2.554552081 0.783519095 1.024126751 1.032689906 3.100586129 3.445216896 2.733794022 1.904983604 0.983757305 1 10.0851684 -6.242082264 24.44908731 2.329450473 1.285164873 0.170353589 0.880707507 964.9062137 1218728.091 0.272311035 0.350969101 5.73E-07 6.242082264 -1.0442856 ATHGSNS(ph)LPSSAR ddPTM_A459_MK2206_30min_R2 2 ATHGSNSLPSSAR 13 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0J9YYG8;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 ATHGSNS(1)LPSSAR;ATHGS(0.177)NS(0.822)LPSS(0.001)AR 125.61 0.0013967 21722700 75480 142116 101059 165029 145511 209475 137250 102546 164552 90749 TRUE FALSE 81258.80683 135058.7261 104428.2566 151545.6028 139797.507 217446.7179 119228.9101 115949.1143 178864.4355 87787.86756 0.925626844 1.538466873 1.189552264 1.726270463 1.59244678 2.476956372 1.358147925 1.320787456 2.037461901 1 16.42173395 -5.762468764 24.98333953 1.678522496 1.249941654 0.182831705 0.407320995 45.37323168 1101270.402 0.11121085 0.176193726 1.73E-06 5.762468764 -0.428580842 ATIAGGGVIPHIHK ddPTM_A459_MK2206_30min_R2 1 ATIAGGGVIPHIHK 14 0 Q71UI9-3;Q71UI9-4;Q71UI9;P0C0S5 Q71UI9-3 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z 0 84.169 0.014821 3525100 15387 23631 19746 24205 21327 27755 23281 21325 18111 22178 FALSE TRUE 16565.04055 22457.5189 20404.32178 22227.37407 20489.59482 28811.23597 20224.17673 24112.25072 19686.26204 21454.33368 0.772106969 1.046759095 0.951058285 1.0360319 0.955032915 1.342909848 0.94266161 1.123887187 0.917589068 1 14.38898147 -4.760639595 24.88794087 1.040605374 0.772106649 0.30670495 0.118363322 22.37983642 695965.1431 0.028344487 0.165742998 1.74E-05 4.760639595 -0.268498726 ATIS(ph)DEEIER ddPTM_A459_MK2206_30min_R2 3 ATISDEEIER 10 0 C9J0A7;Q9UQN3-2;Q9UQN3 C9J0A7 CHMP2B Charged multivesicular body protein 2b 1 AT(0.213)IS(0.787)DEEIER;AT(0.012)IS(0.988)DEEIER;AT(0.001)IS(0.999)DEEIER 158.34 0.00047709 525210300 123851 140894 156536 193164 156122 199486 175507 130232 152721 144329 TRUE FALSE 133333.1278 133897.4088 161754.8321 177381.8833 149991.8658 207077.5795 152462.7201 147253.7696 166004.3965 139619.5565 0.954974583 0.959016145 1.158539936 1.270465884 1.074289802 1.483155975 1.091986852 1.05467868 1.188976678 1 17.09114151 -5.274205361 5.189228877 1.177342655 0.954328979 0.29113628 0.129156345 0.19448206 17.23493082 0.033543906 0.079470758 5.32E-06 5.274205361 -0.223013676 ATLLEDQQDPS(ph)PSS ddPTM_A459_MK2206_30min_R1 1 ATLLEDQQDPSPSS 14 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 ATLLEDQQDPS(0.998)PS(0.001)S(0.001) 155.66 0.00032668 4000000 3868.7 3546.6 3642.9 3458.1 4138.8 3964.8 4232.3 3566.5 3264.7 3032.6 TRUE FALSE 3539.64675 3315.715695 3395.630098 3724.443461 3973.942832 4189.28355 3949.970989 3535.318467 3604.077248 3408.301383 1.038536899 0.97283524 0.996282229 1.092756491 1.165959927 1.22914117 1.158926558 1.037266975 1.05744089 1 11.7348372 -5.831016914 4.312103715 1.119244776 0.99901649 0.335872084 0.065557327 0.230348812 8.280884711 0.020186077 0.031617183 1.48E-06 5.831016914 -0.120228286 ATLLEDQQDPS(ph)PSS ddPTM_A459_MK2206_30min_R2 1 ATLLEDQQDPSPSS 14 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 ATLLEDQQDPS(0.443)PS(0.322)S(0.235) 85.271 0.024812 3663200 27466 31003 26673 33708 28519 31687 32258 23544 26603 29149 TRUE FALSE 29568.81808 29463.4361 27562.26451 30953.94857 27399.20076 32892.87099 28022.48585 26621.28164 28916.88085 28197.87052 1.048618833 1.044881601 0.977459078 1.097740645 0.971676239 1.166501952 0.993780216 0.944088371 1.025498746 1 14.7832986 -7.491633673 24.99958946 0.984662929 1.048861448 0.218536553 0.055542148 949.1615534 759438.5143 0.022138303 0.01490509 3.22E-08 7.491633673 0.064198519 ATLLEDQQDPSPS(ph)S ddPTM_A459_MK2206_30min_R1 1 ATLLEDQQDPSPSS 14 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 ATLLEDQQDPS(0.287)PS(0.426)S(0.287) 123.28 0.0016518 3951200 2667.3 2675.7 2950.2 2241.2 2971.8 2531.8 3201.9 2700.5 2663 2148.9 TRUE FALSE 2440.432128 2501.511444 2749.948644 2413.817612 2853.426913 2675.148328 2988.307093 2676.889813 2939.82838 2415.121955 1.010479874 1.035770238 1.13863759 0.999459927 1.181483571 1.107665939 1.237331757 1.108387014 1.21725877 1 11.23788033 -6.269149577 24.99091058 1.150488294 1.051960765 0.294851432 0.071739669 700.8001045 2271487.278 0.020750632 0.023958335 5.38E-07 6.269149577 -0.09852753 ATLLEDQQDPSPS(ph)S ddPTM_A459_MK2206_30min_R2 1 ATLLEDQQDPSPSS 14 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 ATLLEDQQDPS(0.006)PS(0.635)S(0.359) 123.11 0.0016757 3049100 27184 32047 27073 30979 26229 33080 31640 22947 26786 29864 TRUE FALSE 29265.22794 30455.59258 27975.60031 28447.9166 25199.11767 34338.88258 27485.62999 25946.25169 29115.79786 28889.54013 1.013004285 1.054208286 0.968364335 0.984713377 0.872257487 1.188626833 0.951404206 0.898119235 1.007831822 1 14.81825962 ATLLNVPDLS(ph)DSIHSANASER ddPTM_A459_MK2206_30min_R1 1 ATLLNVPDLSDSIHSANASER 21 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ATLLNVPDLS(0.789)DS(0.211)IHSANASER 124.17 4.73E-05 7320300 1235.7 1206.1 1067 1085.6 1182.1 1179.2 1557.1 1319.3 1528.3 2114.1 TRUE FALSE 1130.597226 1127.582671 994.5750128 1169.2131 1135.014454 1245.965285 1453.2287 1307.765499 1687.172254 2376.010669 0.475838447 0.4745697 0.418590298 0.492090846 0.477697541 0.524393809 0.611625494 0.550403883 0.710086144 1 11.2143256 -8.942373645 0.445269593 1.039392728 0.449189904 0.959731359 0.032610279 0.333620259 0.130976075 0.058107353 0.020221997 1.14E-09 8.942373645 -0.590202824 down ATLLNVPDLSDS(ph)IHSANASER ddPTM_A459_MK2206_30min_R1 1 ATLLNVPDLSDSIHSANASER 21 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ATLLNVPDLS(0.387)DS(0.504)IHS(0.084)ANAS(0.026)ER 72.566 0.0029855 5254900 3118.9 2168.9 2427.8 1793.7 2491.2 2670.4 3024.6 2408 3085.1 3707 TRUE FALSE 2853.621177 2027.704216 2263.0077 1931.851085 2391.970229 2821.59574 2822.834453 2386.94711 3405.807185 4166.251146 0.684937388 0.486697548 0.543176016 0.463690502 0.57413011 0.677250516 0.677547837 0.572924441 0.817475247 1 12.02453409 -8.696205871 0.533268023 1.015973711 0.543509664 0.758758786 0.075734224 0.57856624 0.368218524 0.092463963 0.038898112 2.01E-09 8.696205871 -0.472464047 ATLLNVPDLSDSIHS(ph)ANASER ddPTM_A459_MK2206_30min_R2 1 ATLLNVPDLSDSIHSANASER 21 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ATLLNVPDLSDS(0.005)IHS(0.706)ANAS(0.29)ER 102.5 0.00014014 2470700 6800.8 8935.7 10847 10801 10148 12647 10900 9243.4 11162 12364 TRUE FALSE 7321.474477 8491.966132 11208.63357 9918.523749 9749.53853 13128.29045 9468.816907 10451.54412 12132.85058 11960.56369 0.612134567 0.70999715 0.937132551 0.829268921 0.815140388 1.097631415 0.791669787 0.873833741 1.01440458 1 13.54599776 -4.149562791 0.715057857 0.928220983 1.42E-11 0.555123542 0.093605813 5.044085065 1.023728718 0.037334656 4.652396077 7.09E-05 4.149562791 -0.928220983 ATLPDADKER ddPTM_A459_MK2206_30min_R2 2 ATLPDADKER 10 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;H7C5W8 P12814-4 ACTN1 Alpha-actinin-1 0 ; 114.4 0.019839 11582000 67435 75556 66213 67752 74777 64223 72821 59382 65718 66453 FALSE TRUE 72597.87545 71803.99891 68420.50837 62216.44487 71840.87926 66667.05127 63259.51523 67143.43129 71434.03285 64284.64405 1.129319086 1.11696969 1.064336738 0.967827477 1.117543393 1.037060285 0.984053286 1.044470764 1.111214566 1 15.97218654 -5.323924784 3.693101778 1.039099213 1.124995746 0.347896146 0.046079246 0.250416509 6.775697921 0.012308797 0.02981971 4.74E-06 5.323924784 0.085896533 ATLPS(ph)PDKLPGFK ddPTM_A459_MK2206_30min_R2 2 ATLPSPDKLPGFK 13 1 P22314;P22314-2;Q5JRR6 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 AT(0.001)LPS(0.999)PDKLPGFK;AT(0.003)LPS(0.997)PDKLPGFK 79.337 0.021606 34759000 181013 177453 181552 147587 149935 121922 179978 147486 120113 172591 TRUE FALSE 194871.4945 168640.9421 187604.8531 135528.67 144047.7985 126561.8271 156346.6724 166762.9266 130560.2116 166959.3698 1.167179145 1.010071745 1.123655733 0.811746416 0.862771576 0.758039679 0.936435449 0.998823407 0.781987928 1 17.34913753 -5.756402222 24.99998703 0.875228473 1.091279206 0.579818425 0.086374666 90.14966498 447416.4534 0.023473742 0.039105771 1.75E-06 5.756402222 0.216050733 ATLSSTSGLDLMSESGEGEIS(ph)PQR ddPTM_A459_MK2206_30min_R1 1 ATLSSTSGLDLMSESGEGEISPQR 24 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;H0YDG6;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 ATLSST(0.001)S(0.002)GLDLMS(0.165)ES(0.345)GEGEIS(0.487)PQR 61.112 0.0048065 4651400 475.98 671.02 479.31 315.6 440.44 445.73 484.9 411.21 542.11 522.66 TRUE FALSE 435.4954015 627.336476 446.7757726 339.9075667 422.8963422 470.9668474 452.5532058 407.6148343 598.4642745 587.4110667 0.741380996 1.067968432 0.760584534 0.578653665 0.719932542 0.801767066 0.770419952 0.693917526 1.018816819 1 9.198226636 -8.271647225 24.39140952 1.009408494 0.770106678 0.4092335 0.116530457 605.8390638 1447615.839 0.115027714 0.031124618 5.35E-09 8.271647225 -0.239301816 ATLSSTSGLDLMSESGEGEIS(ph)PQREVSR ddPTM_A459_MK2206_30min_R1 2 ATLSSTSGLDLMSESGEGEISPQREVSR 28 1 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;H0YDG6;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 ATLSSTSGLDLMSES(0.007)GEGEIS(0.988)PQREVS(0.005)R;ATLSSTSGLDLMS(0.001)ES(0.055)GEGEIS(0.943)PQREVS(0.001)R 115.63 2.33E-12 15469800 906.74 1002.13 769.19 1022.77 1189.57 755.89 937.4 993.09 577.83 465.4 TRUE FALSE 829.6170015 936.8911549 716.9795259 1101.543923 1142.186908 798.6878386 874.8677564 984.4075188 637.8974963 523.0572656 1.586092109 1.791182757 1.370747666 2.105971937 2.183674682 1.526960605 1.672604156 1.882026278 1.219555751 1 9.030825095 -8.399474046 3.835441141 1.009029661 1.766474055 0.555321828 0.237585572 0.169702483 4.11774552 0.236563247 0.062496516 3.99E-09 8.399474046 0.757444394 ATLTAS(ph)PLGAS ddPTM_A459_MK2206_30min_R1 2 ATLTASPLGAS 11 0 Q13111;Q13111-3 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 AT(0.004)LT(0.017)AS(0.98)PLGAS;ATLT(0.002)AS(0.997)PLGAS 105.17 0.011852 18821300 12288.6 12358.1 12111.7 10273.7 13071.5 11625.1 12519.8 11105.8 10624.9 9768.1 TRUE FALSE 11243.39004 11553.58544 11289.59155 11064.98215 12550.83448 12283.30312 11684.62699 11008.70316 11729.39638 10978.24597 1.02415177 1.052407231 1.02836023 1.007900732 1.14324588 1.118876653 1.064343704 1.002774322 1.068421714 1 13.42235995 -1.581485845 18.05079973 1.054148763 0.005280184 0 0.046598126 0 0 0.01126845 0 0.026212845 1.581485845 -1.048868579 ATNES(ph)EDEIPQLVPIGK ddPTM_A459_MK2206_30min_R1 18 ATNESEDEIPQLVPIGK 17 0 O76021;J3QSV6;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AT(0.003)NES(0.997)EDEIPQLVPIGK;AT(0.002)NES(0.998)EDEIPQLVPIGK;AT(0.001)NES(0.999)EDEIPQLVPIGK;ATNES(1)EDEIPQLVPIGK;AT(0.004)NES(0.996)EDEIPQLVPIGK;AT(0.003)NES(0.997)EDEIPQLVPIGK;AT(0.001)NES(0.999)EDEIPQLVPIGK;AT(0.211)NES(0.789)EDEIPQLVPIGK;AT(0.009)NES(0.991)EDEIPQLVPIGK;AT(0.012)NES(0.988)EDEIPQLVPIGK;AT(0.001)NES(0.999)EDEIPQLVPIGK;AT(0.008)NES(0.992)EDEIPQLVPIGK;ATNES(1)EDEIPQLVPIGK;AT(0.001)NES(0.999)EDEIPQLVPIGK;AT(0.002)NES(0.998)EDEIPQLVPIGK;ATNES(1)EDEIPQLVPIGK;AT(0.085)NES(0.915)EDEIPQLVPIGK;AT(0.001)NES(0.999)EDEIPQLVPIGK 240.82 2.93E-65 1818110100 189822.37 199333.36 195151.2 170259.55 203731.24 181990.08 187371.1 189819.92 166082.3 149046.84 TRUE FALSE 173676.9806 186356.722 181904.8803 183372.97 195616.1933 192294.2011 174871.9158 188160.3445 183347.1494 167511.8878 1.036803912 1.112498489 1.085922215 1.094686308 1.167774991 1.147943609 1.043937347 1.12326562 1.094532166 1 17.35390396 -8.577353639 18.85840859 0.999999999 1.103408071 0.37995887 0.038675803 1650.040796 571220.6492 0.037977168 0.009805663 2.65E-09 8.577353639 0.103408072 ATNES(ph)EDEIPQLVPIGK ddPTM_A459_MK2206_30min_R2 41 ATNESEDEIPQLVPIGK 17 0 O76021;J3QSV6;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AT(0.001)NES(0.999)EDEIPQLVPIGK;AT(0.002)NES(0.998)EDEIPQLVPIGK;AT(0.002)NES(0.998)EDEIPQLVPIGK;AT(0.007)NES(0.993)EDEIPQLVPIGK;AT(0.328)NES(0.672)EDEIPQLVPIGK;ATNES(1)EDEIPQLVPIGK;AT(0.054)NES(0.946)EDEIPQLVPIGK;AT(0.001)NES(0.999)EDEIPQLVPIGK;AT(0.187)NES(0.813)EDEIPQLVPIGK;AT(0.016)NES(0.984)EDEIPQLVPIGK;AT(0.01)NES(0.99)EDEIPQLVPIGK;AT(0.286)NES(0.714)EDEIPQLVPIGK;AT(0.014)NES(0.986)EDEIPQLVPIGK;AT(0.161)NES(0.839)EDEIPQLVPIGK;AT(0.017)NES(0.983)EDEIPQLVPIGK;AT(0.286)NES(0.714)EDEIPQLVPIGK;AT(0.009)NES(0.991)EDEIPQLVPIGK;AT(0.02)NES(0.98)EDEIPQLVPIGK;AT(0.016)NES(0.984)EDEIPQLVPIGK;ATNES(1)EDEIPQLVPIGK;ATNES(1)EDEIPQLVPIGK;AT(0.091)NES(0.909)EDEIPQLVPIGK;AT(0.07)NES(0.93)EDEIPQLVPIGK;ATNES(1)EDEIPQLVPIGK;AT(0.007)NES(0.993)EDEIPQLVPIGK;AT(0.004)NES(0.996)EDEIPQLVPIGK;AT(0.066)NES(0.934)EDEIPQLVPIGK;AT(0.006)NES(0.994)EDEIPQLVPIGK;AT(0.021)NES(0.979)EDEIPQLVPIGK;AT(0.018)NES(0.982)EDEIPQLVPIGK;AT(0.001)NES(0.999)EDEIPQLVPIGK;AT(0.019)NES(0.981)EDEIPQLVPIGK;AT(0.065)NES(0.935)EDEIPQLVPIGK;AT(0.096)NES(0.904)EDEIPQLVPIGK;AT(0.008)NES(0.992)EDEIPQLVPIGK;AT(0.014)NES(0.986)EDEIPQLVPIGK;AT(0.055)NES(0.945)EDEIPQLVPIGK;AT(0.016)NES(0.984)EDEIPQLVPIGK;AT(0.013)NES(0.987)EDEIPQLVPIGK;AT(0.009)NES(0.991)EDEIPQLVPIGK;AT(0.006)NES(0.994)EDEIPQLVPIGK 229.62 2.37E-16 774042170 4624854.34 5694432.8 5091645.4 5947455.79 6014045.9 5401289.4 6363213.3 4747007.57 5048599.5 5496299.7 TRUE FALSE 4978936.744 5411655.548 5261398.316 5461529.627 5777904.24 5606839.253 5527715.75 5367457.758 5487717.559 5316955.891 0.936426189 1.017810879 0.989550868 1.027191073 1.086694033 1.05452055 1.039639196 1.009498267 1.032116435 1 22.34216907 -3.389193593 0.870117845 1.036784567 5.79E-12 0.542916873 0.025874053 17.11339578 1.459810543 0.009395367 28.9383441 0.000408137 3.389193593 -1.036784567 ATPATAPGT(ph)SPR ddPTM_A459_MK2206_30min_R2 1 ATPATAPGTSPR 12 0 Q96P47;Q96P47-2;Q96P47-4;Q96P47-5;H0Y873 Q96P47 AGAP3 "Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3" 1 ATPAT(0.001)APGT(0.626)S(0.373)PR 136.3 0.0033177 9031700 60719 67208 66850 78608 76422 79356 78636 65038 68292 69903 TRUE FALSE 65367.69332 63870.54845 69078.74563 72185.47495 73421.28829 82375.94819 68310.99874 73538.68991 74231.91472 67622.07083 0.966662105 0.94452222 1.021541411 1.067483945 1.085759241 1.218181389 1.010187915 1.087495384 1.097746842 1 16.04520658 -5.574794424 2.059308798 1.089538823 0.953825225 0.442056409 0.056156355 0.286416191 2.413087254 0.016440787 0.039351277 2.66E-06 5.574794424 -0.135713598 ATPATAPGTS(ph)PR ddPTM_A459_MK2206_30min_R1 2 ATPATAPGTSPR 12 0 Q96P47;Q96P47-2;Q96P47-4;Q96P47-5;H0Y873 Q96P47 AGAP3 "Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3" 1 ATPATAPGT(0.049)S(0.951)PR;ATPATAPGT(0.006)S(0.994)PR 154.23 0.00044769 31664000 12493.4 11444.4 10988.5 9948 12844 11863.5 13627.6 12464.5 10844.2 10356.2 TRUE FALSE 11430.77072 10699.36748 10242.63124 10714.19668 12332.39628 12535.20112 12718.52767 12355.52419 11971.4934 11639.20424 0.982092116 0.91925249 0.880011298 0.920526564 1.059556652 1.076980939 1.09273172 1.061543722 1.02854913 1 13.50670481 -6.261739342 24.46017768 1.059467149 0.921779364 0.77482831 0.033615479 8.827740785 719851.5428 0.010411725 0.012555714 5.47E-07 6.261739342 -0.137687785 ATPATAPGTS(ph)PR ddPTM_A459_MK2206_30min_R2 2 ATPATAPGTSPR 12 0 Q96P47;Q96P47-2;Q96P47-4;Q96P47-5;H0Y873 Q96P47 AGAP3 "Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3" 1 ATPAT(0.001)APGT(0.317)S(0.682)PR;ATPATAPGT(0.022)S(0.978)PR 120.6 0.0039914 25483000 54819 64637 53685 68152 66572 70154 80924 62005 64531 66984 TRUE FALSE 59015.98479 61427.22057 55474.83111 62583.76359 63958.04878 72823.75963 70298.58159 70109.2664 70143.78973 64798.31757 0.910764153 0.947975547 0.8561153 0.965823897 0.987032552 1.12385263 1.084882822 1.081961215 1.082493996 1 15.98366873 -6.409852438 2.181934646 1.079640529 0.912930373 0.766662235 0.040011254 0.136376925 1.279529144 0.01336587 0.015525137 3.89E-07 6.409852438 -0.166710155 ATPELGSSENSAS(ph)SPPR ddPTM_A459_MK2206_30min_R1 1 ATPELGSSENSASSPPR 17 0 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 ATPELGSSENS(0.001)AS(0.717)S(0.281)PPR 178.47 8.55E-08 10848000 2421.6 2492.4 2495 2311.2 2627.4 2700.4 2659.8 1949.5 2116.8 1903.6 TRUE FALSE 2215.630204 2330.144307 2325.646351 2489.209024 2522.745094 2853.294314 2482.369595 1932.455727 2336.848935 2139.432339 1.035615926 1.089141388 1.087038982 1.163490417 1.179165636 1.333668872 1.160293574 0.903256294 1.092275223 1 11.06301234 -7.738960045 24.99637037 0.998324324 1.153759646 0.394417575 0.085792077 240.4346536 267356.8775 0.04366673 0.025187115 1.82E-08 7.738960045 0.155435323 ATPELGSSENSAS(ph)SPPR ddPTM_A459_MK2206_30min_R2 2 ATPELGSSENSASSPPR 17 0 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 ATPELGSSENS(0.006)AS(0.657)S(0.336)PPR;ATPELGS(0.004)S(0.006)ENS(0.018)AS(0.486)S(0.486)PPR 109.1 0.0022713 39465000 47468.9 69224 56463 71883 67762 75250 71264 54071 68760 64096 TRUE FALSE 51103.15548 65786.43682 58345.44824 66009.92896 65101.3234 78113.69148 61906.9512 61138.26535 74740.62051 62004.55277 0.824183922 1.060993651 0.940986518 1.064598098 1.049944246 1.25980574 0.998425897 0.986028648 1.205405364 1 15.92008653 -3.776241169 0.779283554 1.080842548 2.12E-12 0.36043362 0.09443254 12.37880817 1.779050441 0.034596783 16.7635394 0.000167401 3.776241169 -1.080842548 ATPPPSPLLSELLKK ddPTM_A459_MK2206_30min_R1 1 ATPPPSPLLSELLKK 15 1 H7C128;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2 H7C128 BRD8 Bromodomain-containing protein 8 0 109.55 0.005031 1644000 968.5 866.31 902.66 720.02 1171.2 890.22 1015.3 779.3 737.71 510.66 FALSE TRUE 886.1239892 809.9130615 841.3899542 775.4760652 1124.548624 940.6234871 947.5711895 772.4866623 814.3975944 573.9244161 1.543973325 1.411184189 1.466029203 1.35118152 1.959401957 1.63893269 1.651038295 1.345972816 1.418997993 1 9.164716941 -8.682942422 1.17035607 1.005901978 1.565265929 0.500969081 0.167471654 0.621741689 1.731352027 0.170326891 0.052976214 2.08E-09 8.682942422 0.559363951 ATPT(ph)KAPAPVVLGSPVVLGPPVGQAR ddPTM_A459_MK2206_30min_R1 1 ATPTKAPAPVVLGSPVVLGPPVGQAR 26 1 A0A0C4DFM2;Q6ZN55;Q6ZN55-2 A0A0C4DFM2 ZNF574 Zinc finger protein 574 1 AT(0.169)PT(0.831)KAPAPVVLGSPVVLGPPVGQAR 76.161 0.00025892 5975600 1524.3 1842.5 1902.1 1465.1 1587 1584.1 1708 1462.5 2127.8 2001.5 TRUE FALSE 1394.650281 1722.552915 1772.990752 1577.942256 1523.786429 1673.790373 1594.062436 1449.713517 2348.992424 2249.460931 0.619993111 0.76576254 0.788184728 0.701475733 0.677400709 0.744085105 0.708641975 0.644471525 1.04424682 1 11.13536359 -8.266457051 24.99757294 1.022123464 0.711186567 0.864561836 0.04997787 149.6125847 745342.7009 0.043654281 0.012636349 5.41E-09 8.266457051 -0.310936897 ATPT(ph)KAPAPVVLGSPVVLGPPVGQAR ddPTM_A459_MK2206_30min_R2 2 ATPTKAPAPVVLGSPVVLGPPVGQAR 26 1 A0A0C4DFM2;Q6ZN55;Q6ZN55-2 A0A0C4DFM2 ZNF574 Zinc finger protein 574 1 AT(0.168)PT(0.832)KAPAPVVLGSPVVLGPPVGQAR;AT(0.229)PT(0.77)KAPAPVVLGS(0.001)PVVLGPPVGQAR 102.78 1.14E-06 19875700 36846.6 37627.2 35950.5 32854.9 35114.9 30206.9 45712.8 30255.9 23370.2 42124.3 TRUE FALSE 39667.60403 35758.68796 37149.07173 30170.54957 33736.11259 31356.44475 39710.65445 34210.45001 25402.89775 40749.78754 0.973443211 0.87751839 0.911638415 0.740385445 0.82788438 0.769487319 0.974499668 0.839524623 0.623387244 1 15.31450492 -4.953818276 1.364749558 0.825280188 0.996649014 0.142210837 0.104825861 1.845676219 3.887981232 0.030634308 0.402661782 1.11E-05 4.953818276 0.171368825 ATPVQLPS(ph)PPCTSSPVVPSHPPVQQVK ddPTM_A459_MK2206_30min_R2 2 ATPVQLPSPPCTSSPVVPSHPPVQQVK 27 0 Q14686 Q14686 NCOA6 Nuclear receptor coactivator 6 1 ATPVQLPS(0.857)PPCT(0.083)S(0.032)S(0.028)PVVPSHPPVQQVK;AT(0.002)PVQLPS(0.557)PPCT(0.147)S(0.147)S(0.147)PVVPSHPPVQQVK 106.18 1.44E-09 15794900 84504 104384 100579 120588 116302 116517 122393 91751 100120 101971 TRUE FALSE 90973.69121 99200.44235 103932.2537 110735.5747 111735.3991 120951.1361 106322.6521 103743.1707 108828.2566 98643.69462 0.922245376 1.005644028 1.053612743 1.122581378 1.132717094 1.226141585 1.077845396 1.051695916 1.10324595 1 16.58993922 -5.078740548 1.514914468 1.10899142 0.905494043 0.50329812 0.056258261 0.543423343 1.729599342 0.017109445 0.140496659 8.34E-06 5.078740548 -0.203497376 ATQASQEY(ph) ddPTM_A459_MK2206_30min_R1 1 ATQASQEY 8 0 P16104 P16104 H2AFX Histone H2AX 1 ATQAS(0.068)QEY(0.932) 81.784 0.014574 10644000 4036.6 3832.4 5129.3 4372.1 5012.2 4908.1 5232.4 4523 4259.4 3567.4 TRUE FALSE 3693.265973 3582.910063 4781.137407 4708.8399 4812.55346 5185.992381 4883.356143 4483.455888 4702.179872 4009.356444 0.921161793 0.893637199 1.192494974 1.174462776 1.200330658 1.293472519 1.217990022 1.118248265 1.172801655 1 11.96915497 -5.261932744 24.9909836 1.182639536 0.907399473 0.679696617 0.072103812 21.6180791 1095118.888 0.018353362 0.042382784 5.47E-06 5.261932744 -0.275240063 ATQCLVKS(ph)PEVK ddPTM_A459_MK2206_30min_R1 1 ATQCLVKSPEVK 12 1 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 ATQCLVKS(1)PEVK 119.77 0.019911 17972000 1619.4 1614 1870.9 1916 1208 1094.8 1253.3 1430 1010.3 883.93 TRUE FALSE 1481.661526 1508.928307 1743.908521 2063.570652 1159.882802 1156.78663 1169.694644 1417.497661 1115.3243 993.4379217 1.491448528 1.518895417 1.755427775 2.07720141 1.167544319 1.164427696 1.177420972 1.426860833 1.12269149 1 9.956286008 -6.291029921 24.912602 1.197277198 1.700231634 0.679838394 0.179213135 432.1658722 363843.9836 0.058317716 0.066135765 5.12E-07 6.291029921 0.502954436 ATRPAS(ph)TSQPDPSPDR ddPTM_A459_MK2206_30min_R2 1 ATRPASTSQPDPSPDR 16 1 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 AT(0.001)RPAS(0.858)T(0.07)S(0.07)QPDPSPDR 125.41 0.004609 0 2760.4 2595.8 3206.2 2993.2 2491.6 3700.7 2349.8 3710.4 3280.8 1050.3 TRUE FALSE 2971.738346 2466.896347 3313.093108 2748.645985 2393.767265 3841.532732 2041.268437 4195.36202 3566.158054 1016.028797 2.924856417 2.427978768 3.26082599 2.705283544 2.356003365 3.780928988 2.009065534 4.129176291 3.509898601 1 9.988725577 ATRPASTSQPDPS(ph)PDR ddPTM_A459_MK2206_30min_R1 4 ATRPASTSQPDPSPDR 16 1 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 ATRPASTSQPDPS(1)PDR;ATRPASTSQPDPS(1)PDR;ATRPASTSQPDPS(1)PDR;ATRPASTSQPDPS(1)PDR 150.28 0.0011146 38490900 5690.01 4973.61 5049.04 4440.91 5350.83 5399.38 7433.8 5184.21 6599.43 7179.23 TRUE FALSE 5206.04477 4649.827085 4706.325232 4782.949658 5137.695111 5705.08823 6937.904766 5138.884999 7285.464365 8068.647213 0.645219035 0.576283355 0.583285538 0.592782102 0.636748017 0.707068741 0.859859724 0.636895487 0.902935049 1 12.9781111 -8.058957536 0.404157189 1.014487149 0.568192888 0.769683938 0.068914701 0.512419556 0.240739307 0.087246249 0.062794444 8.73E-09 8.058957536 -0.446294261 ATRPASTSQPDPS(ph)PDR ddPTM_A459_MK2206_30min_R2 2 ATRPASTSQPDPSPDR 16 1 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 ATRPASTSQPDPS(1)PDR;ATRPASTSQPDPS(1)PDR 111.78 0.0014216 21508500 20596.18 25563.8 22342.79 30427.7 19869.6 28433.8 31313.5 25950.5 22676.2 28206.4 TRUE FALSE 22173.03938 24294.33887 23087.68747 27941.65958 19089.41967 29515.86818 27201.99984 29342.31945 24648.53489 27286.02748 0.812615152 0.89035822 0.846135902 1.024028126 0.699604209 1.081720973 0.996920488 1.075360621 0.903339077 1 14.73587475 -6.789219281 24.99979786 1.01526904 0.865485776 0.439775816 0.088071468 208.1452614 187313.4089 0.029328269 0.025870633 1.62E-07 6.789219281 -0.149783263 ATS(ph)DEEDSVLSIAR ddPTM_A459_MK2206_30min_R2 1 ATSDEEDSVLSIAR 14 0 A6QL64 A6QL64 ANKRD36 Ankyrin repeat domain-containing protein 36A 1 AT(0.201)S(0.791)DEEDS(0.008)VLSIAR 87.863 0.036327 0 4314.3 5684.8 5926.2 5316.6 6774.9 6723.7 6309.7 5858.3 4830.9 5831.1 TRUE FALSE 4644.606125 5402.501098 6123.77655 4882.216773 6508.883385 6979.575115 5481.228811 6623.999925 5251.08295 5640.831685 0.823390306 0.957749034 1.085615897 0.865513642 1.153887183 1.237330859 0.97170579 1.174294908 0.930905803 1 12.46169217 -3.840971389 0.772526947 1.071739523 3.87E-15 0.293604508 0.109693054 11.87472713 1.841696858 0.040402817 15.42475002 0.000144221 3.840971389 -1.071739523 ATS(ph)EEDVSIKSPICEK ddPTM_A459_MK2206_30min_R1 1 ATSEEDVSIKSPICEK 16 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 AT(0.023)S(0.583)EEDVS(0.388)IKS(0.006)PICEK 85.163 0.0090857 45936000 8723.4 9092.6 8563.7 6986.2 5858.4 5233.9 6361.3 6151 7936.9 8195.3 TRUE FALSE 7981.429022 8500.670087 7982.419904 7524.278334 5625.047523 5530.238895 5936.949284 6097.222455 8761.969157 9210.595635 0.866548629 0.922922949 0.86665621 0.8169155 0.610714849 0.600421418 0.644578214 0.66197917 0.951292349 1 13.16907874 -6.001556924 4.270955646 0.714941923 0.885477257 0.166770482 0.130914032 0.288230143 12.78953863 0.03829164 0.054826526 9.96E-07 6.001556924 0.170535335 ATS(ph)FEESER ddPTM_A459_MK2206_30min_R1 2 ATSFEESER 9 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 AT(0.126)S(0.859)FEES(0.015)ER;AT(0.133)S(0.866)FEES(0.001)ER 141.89 0.0021677 25589000 7033.1 5892.7 6570.7 5778.2 5790.4 6478.6 5538.5 5603.3 5131.5 4148.7 TRUE FALSE 6434.897913 5509.084159 6124.699191 6223.237965 5559.756107 6845.412733 5169.036771 5554.310939 5664.937788 4662.672277 1.380087969 1.181529353 1.31355987 1.334693411 1.19239693 1.46813079 1.108599632 1.191229108 1.21495517 1 12.18694132 -8.715447377 0.519022642 0.993759405 1.301733816 0.460779033 0.095625119 1.134975715 0.680624431 0.11594167 0.048559053 1.93E-09 8.715447377 0.307974411 ATS(ph)FSSAGEVPKPRPPSTR ddPTM_A459_MK2206_30min_R2 1 ATSFSSAGEVPKPRPPSTR 19 2 O15231-3;H7BZT5;O15231-4;O15231-7;O15231;O15231-8;O15231-6 O15231-3 ZNF185 Zinc finger protein 185 1 AT(0.196)S(0.401)FS(0.401)S(0.003)AGEVPKPRPPSTR 65.765 0.0091841 25642000 31664 41856 41539 38889 62992 85645 108020 99037 87772 133950 TRUE FALSE 34088.22019 39777.4919 42923.88953 35711.6443 60518.61757 88904.28049 93836.84424 111981.4759 95406.2499 129579.2225 0.263068566 0.306974306 0.331255958 0.275596995 0.467039518 0.686099814 0.724165823 0.864193146 0.736277376 1 16.98347488 -6.81469103 1.071406795 0.857863544 0.277211815 0.929503047 0.067890321 0.117652976 0.286584077 0.036524825 0.031352331 1.53E-07 6.81469103 -0.580651729 down ATS(ph)NVFAMFDQSQIQEFK ddPTM_A459_MK2206_30min_R1 2 ATSNVFAMFDQSQIQEFK 18 0 J3QRS3;P19105;O14950;J3KTJ1;P24844;P24844-2 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 1 AT(0.185)S(0.815)NVFAMFDQSQIQEFK;AT(0.179)S(0.821)NVFAMFDQSQIQEFK 205.36 2.13E-11 257520000 18792.1 22806 22517.2 19800.3 20216.5 21421.8 22827.3 23706.3 19701.1 17486 TRUE FALSE 17193.73321 21321.32525 20988.7952 21325.32254 19411.234 22634.6838 21304.53247 23499.03832 21749.09985 19652.29769 0.874896843 1.084927859 1.068007188 1.085131259 0.987733562 1.151757629 1.084073364 1.195739994 1.106695013 1 14.26241038 -4.761023206 6.659861277 1.089869355 0.869312439 0.534709846 0.058621081 0.091805133 20.4276376 0.014683045 0.091638198 1.73E-05 4.761023206 -0.220556916 ATS(ph)NVFAMFDQSQIQEFK ddPTM_A459_MK2206_30min_R2 1 ATSNVFAMFDQSQIQEFK 18 0 J3QRS3;P19105;O14950;J3KTJ1;P24844;P24844-2 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 1 AT(0.402)S(0.598)NVFAMFDQSQIQEFK 130.81 0.001054 50082000 111030 143510 131590 147850 136170 135070 141600 106490 135060 119380 TRUE FALSE 119530.5422 136383.5021 135977.1449 135770.1821 130823.2816 140210.1835 123007.7499 120408.6086 146807.2747 115484.6404 1.035034112 1.180966591 1.177447879 1.175655755 1.132819751 1.214102439 1.065143811 1.04263743 1.271227708 1 16.81734146 -11.2447519 6.794999596 0.998152756 1.143349414 0.25980807 0.072857672 0.002007529 8.22E-05 0.06945955 0.016645927 5.69E-12 11.2447519 0.145196658 ATS(ph)PEAGGGGGALK ddPTM_A459_MK2206_30min_R1 2 ATSPEAGGGGGALK 14 0 Q13233 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 1 AT(0.008)S(0.992)PEAGGGGGALK;AT(0.006)S(0.994)PEAGGGGGALK 188.48 8.07E-05 44425000 19693.3 20713.6 20737.6 17661.8 20562.3 18266.8 19949.2 19375.6 18104.3 15505 TRUE FALSE 18018.28142 19365.14088 19329.98949 19022.1149 19743.26005 19301.05043 18618.42527 19206.20117 19986.30677 17425.87646 1.033995706 1.111286478 1.109269283 1.091601616 1.132985196 1.107608589 1.068435514 1.102165577 1.146932656 1 14.0889436 -4.755865089 24.89599241 1.100716267 1.033995593 0.187739404 0.038315295 254.1634657 1135022.061 0.008798361 0.074346958 1.75E-05 4.755865089 -0.066720674 ATS(ph)PEAGGGGGALK ddPTM_A459_MK2206_30min_R2 2 ATSPEAGGGGGALK 14 0 Q13233 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 1 AT(0.084)S(0.916)PEAGGGGGALK;AT(0.011)S(0.989)PEAGGGGGALK 182.37 7.59E-05 47397000 160878 184742 173071 199073 205685 174014 209227 148992 172674 177541 TRUE FALSE 173194.9434 175567.9809 178841.1008 182808.0991 197608.7734 180636.2247 181755.2436 168465.766 187692.8724 171747.8517 1.008425675 1.022242661 1.041300365 1.06439817 1.150574936 1.051752455 1.05826793 0.980890091 1.09283971 1 17.38993253 -5.351855832 2.514389449 1.05952676 1.012687707 0.122350282 0.043935368 0.626260946 7.552266303 0.012613618 0.035937649 4.45E-06 5.351855832 -0.046839054 ATS(ph)PESTSR ddPTM_A459_MK2206_30min_R1 1 ATSPESTSR 9 0 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 AT(0.044)S(0.956)PESTSR 89.679 0.02955 1898400 5005.6 3482.1 2232.5 2897.2 1937.3 1985.8 3378.4 4473.1 522.16 2134.2 TRUE FALSE 4579.847435 3255.414657 2080.96412 3120.342846 1860.133239 2098.23428 3153.0331 4433.992158 576.4404006 2398.600808 1.909382928 1.357214025 0.867574176 1.300901273 0.775507634 0.874774274 1.314530158 1.848574445 0.240323608 1 11.22797736 -4.853144358 2.920239926 1.06389472 1.987768662 0.313832632 0.397540395 0.422217978 5.680668533 0.099785219 0.858437972 1.40E-05 4.853144358 0.923873943 ATS(ph)PESTSR ddPTM_A459_MK2206_30min_R2 2 ATSPESTSR 9 0 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 AT(0.041)S(0.957)PES(0.001)TSR;AT(0.019)S(0.978)PES(0.002)TSR 173.24 0.0004398 169330000 566970 256310 353270 475700 639050 372410 498670 1396100 979900 747140 TRUE FALSE 610377.6591 243582.0181 365047.8455 436833.7883 613957.686 386582.3235 433194.03 1578575.064 1065129.931 722760.883 0.844508431 0.33701605 0.505074159 0.604396002 0.849461697 0.534868907 0.599360093 2.184090341 1.47369615 1 19.4631589 -7.739972345 24.95890998 1.621669774 0.602110192 0.665543501 0.304770657 113.4048784 131851.8189 0.135875472 0.078353614 1.82E-08 7.739972345 -1.019559581 ATS(ph)PLVSLYPALECR ddPTM_A459_MK2206_30min_R1 4 ATSPLVSLYPALECR 15 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3;Q96G74-4 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 AT(0.004)S(0.996)PLVSLYPALECR;AT(0.012)S(0.988)PLVSLYPALECR;AT(0.008)S(0.992)PLVSLYPALECR;AT(0.088)S(0.912)PLVSLYPALECR 288.29 4.34E-67 293752000 7916.6 8405.4 8826.6 7997.7 9326.3 8267.5 8774.6 8004.7 7258 7414.8 TRUE FALSE 7243.251598 7858.206932 8227.474984 8613.68424 8954.813722 8735.598705 8189.262444 7934.715752 8012.495073 8333.401403 0.869183092 0.942977129 0.987288934 1.033633666 1.074568869 1.048263282 0.982703466 0.952158113 0.961491555 1 13.02468976 -4.937533263 1.825846169 1.00860047 0.849155487 0.588739465 0.035955935 0.497068287 2.204252031 0.011747873 0.123979702 1.15E-05 4.937533263 -0.159444983 ATS(ph)PLVSLYPALECR ddPTM_A459_MK2206_30min_R2 5 ATSPLVSLYPALECR 15 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3;Q96G74-4 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 ATS(1)PLVSLYPALECR;AT(0.002)S(0.998)PLVSLYPALECR;AT(0.058)S(0.942)PLVSLYPALECR;AT(0.006)S(0.994)PLVSLYPALECR;AT(0.016)S(0.981)PLVS(0.002)LYPALECR 177.93 1.96E-05 156052900 83467.8 101419.9 94996.4 96530.6 106648.8 112046 120772.8 79784.6 99991.6 103024.2 TRUE FALSE 89858.15894 96383.53524 98163.53256 88643.74119 102461.2322 116309.989 104915.1863 90212.72116 108688.6886 99662.52879 0.901624312 0.967099033 0.98495928 0.889439013 1.028081803 1.167038309 1.052704437 0.90518194 1.090567237 1 16.60476356 -6.38642901 6.716768215 1.043988491 0.941949053 0.366660251 0.067459395 0.303363975 15.32393181 0.022024513 0.024967527 4.11E-07 6.38642901 -0.102039438 ATS(ph)PPLAGAVSPSVAVR ddPTM_A459_MK2206_30min_R1 1 ATSPPLAGAVSPSVAVR 17 0 H3BS19;Q96JG9 H3BS19 ZNF469 Zinc finger protein 469 1 AT(0.08)S(0.92)PPLAGAVSPSVAVR 87.669 0.024268 0 918.72 1003.3 1090.8 705.21 1044.2 1040.6 1190.9 841.21 605.19 801.34 TRUE FALSE 840.5780396 937.9849876 1016.759535 759.5253964 1002.607303 1099.517873 1111.457234 833.8553897 668.1016662 900.616049 0.933336732 1.041492641 1.128960045 0.843339842 1.113246099 1.220850854 1.234107737 0.92587223 0.741827405 1 9.814768377 -7.985785283 23.9627324 0.858559044 1.073352606 0.314367939 0.126269085 154.0295862 259657.9986 0.071899355 0.034509744 1.03E-08 7.985785283 0.214793562 ATS(ph)PSSSVSGDFDDGHHSVSTPGPSR ddPTM_A459_MK2206_30min_R1 1 ATSPSSSVSGDFDDGHHSVSTPGPSR 26 0 Q86U86-8;Q86U86;E7EVG2;Q86U86-6;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;C9J409;C9JCJ2;C9J053;C9JQF1;C9JPI5 Q86U86-8 PBRM1 Protein polybromo-1 1 AT(0.141)S(0.785)PS(0.033)S(0.033)S(0.008)VS(0.001)GDFDDGHHSVSTPGPSR 155.5 5.84E-14 7958100 1080.4 655.32 720.52 649.36 1364.9 1720.1 1262 936.47 712.31 585.27 TRUE FALSE 988.5063066 612.6585489 671.6131099 699.3738197 1310.533143 1817.490576 1177.814283 928.2825415 786.3571735 657.7776662 1.502797005 0.931406736 1.021033617 1.063237406 1.992364913 2.763077357 1.790596342 1.41124059 1.195475636 1 9.361456214 -6.25148888 23.82727741 1.771158939 1.107704533 0.23955821 0.478071014 500.2889066 1197979.473 0.151848286 0.193409325 5.60E-07 6.25148888 -0.663454406 ATS(ph)PSSSVSGDFDDGHHSVSTPGPSR ddPTM_A459_MK2206_30min_R2 2 ATSPSSSVSGDFDDGHHSVSTPGPSR 26 0 Q86U86-8;Q86U86;E7EVG2;Q86U86-6;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;C9J409;C9JCJ2;C9J053;C9JQF1;C9JPI5 Q86U86-8 PBRM1 Protein polybromo-1 1 AT(0.156)S(0.488)PS(0.156)S(0.156)S(0.042)VS(0.002)GDFDDGHHSVSTPGPSR;AT(0.099)S(0.381)PS(0.176)S(0.153)S(0.153)VS(0.037)GDFDDGHHSVSTPGPSR 74.873 0.00010465 27590000 5445.8 11845.9 11790.9 26766 29491 43915 34094 21013 34883 12637.6 TRUE FALSE 5862.734635 11257.64983 12184.00272 24579.13218 28333.03516 45586.2161 29617.41685 23759.47125 37917.06029 12225.23615 0.479560032 0.920853364 0.996627188 2.010524123 2.31758592 3.728861803 2.422645787 1.943477489 3.101540112 1 13.57757471 -5.819023105 2.005876763 2.530071318 0.70069024 0.534130519 0.677474018 0.238265518 1.957931932 0.205561013 0.383264713 1.52E-06 5.819023105 -1.829381079 ATS(ph)PVKSTTSITDAK ddPTM_A459_MK2206_30min_R1 2 ATSPVKSTTSITDAK 15 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AT(0.012)S(0.979)PVKS(0.003)T(0.006)TSITDAK;AT(0.17)S(0.826)PVKS(0.002)T(0.001)TSITDAK 116 0.010959 26078000 7230.7 7380.6 7839.3 9479.9 9037.9 6283 4797.4 10144.6 2698.4 1288.86 TRUE FALSE 6615.690995 6900.121599 7307.190158 10210.04354 8677.901305 6638.73803 4477.374199 10055.90683 2978.908336 1448.533707 4.567163996 4.763521597 5.044542713 7.048537076 5.990817654 4.583074593 3.090969977 6.942128293 2.056499149 1 10.50037754 -8.423205172 5.233235983 1.031512956 5.211295371 0.642557373 1.122717555 0.13099414 5.018546809 1.11386354 0.28968209 3.77E-09 8.423205172 4.179782415 ATS(ph)SSSGSLSATGR ddPTM_A459_MK2206_30min_R1 2 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 AT(0.008)S(0.491)S(0.491)S(0.008)S(0.002)GS(0.001)LSATGR;AT(0.051)S(0.869)S(0.075)S(0.002)S(0.002)GSLSATGR 185.2 7.91E-05 81262000 2790.12 2427.1 2766.11 2244.17 3465.8 2828.82 2918.62 2517.5 2222.57 2084.75 TRUE FALSE 2552.805642 2269.095349 2578.35416 2417.016362 3327.749847 2988.985344 2723.924185 2495.489763 2453.614105 2343.024569 1.089534304 0.9684471 1.10043838 1.031579606 1.420279536 1.275695263 1.162567487 1.065071957 1.047199478 1 11.19415637 ATS(ph)TATSGFAGAIGQK ddPTM_A459_MK2206_30min_R2 2 ATSTATSGFAGAIGQK 16 0 E7ER27;A0A2R8YD50;P51659-3;P51659;P51659-2;A0A2R8Y7L2;E7ET17;E7EPL9 E7ER27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 1 ATS(0.773)T(0.226)AT(0.001)SGFAGAIGQK;AT(0.003)S(0.993)T(0.003)ATSGFAGAIGQK 351.03 3.16E-174 11964200 78272 94194 78691 89064 91330 88530 103013 71404 69276 83350 TRUE FALSE 84264.5645 89516.46293 81314.51866 81787.1863 87743.9253 91899.07119 89487.26936 80736.74797 75301.50126 80630.29633 1.045073234 1.11020878 1.008485921 1.01434808 1.088225261 1.139758569 1.109846713 1.001320244 0.933910759 1 16.2990344 -7.934180161 5.341507683 0.966817643 1.073069058 0.523025693 0.042490123 0.162829092 8.790067422 0.026625938 0.012273465 1.16E-08 7.934180161 0.106251415 ATSAGS(ph)SPSCSLAGR ddPTM_A459_MK2206_30min_R1 1 ATSAGSSPSCSLAGR 15 0 Q9BXB5;Q9BXB5-2 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 1 ATSAGS(0.642)S(0.357)PS(0.002)CSLAGR 219.95 2.27E-09 11064000 3599.8 2464.4 2096 1995.3 2915.6 2184.4 2359.8 2202.6 2137.8 2033.9 TRUE FALSE 3293.618107 2303.967112 1953.72936 2148.978352 2799.465478 2308.07884 2202.382048 2183.3429 2360.03196 2285.874887 1.440856683 1.007914792 0.854696541 0.940111974 1.224680097 1.009713547 0.963474449 0.955145407 1.03244144 1 11.15853073 -4.762117283 7.091365356 0.996678091 1.449766877 0.688538055 0.089238883 0.064723986 19.64928584 0.023668314 0.141656682 1.73E-05 4.762117283 0.453088786 ATSAGS(ph)SPSCSLAGR ddPTM_A459_MK2206_30min_R2 1 ATSAGSSPSCSLAGR 15 0 Q9BXB5;Q9BXB5-2 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 1 ATS(0.001)AGS(0.932)S(0.067)PSCSLAGR 166.79 7.72E-05 27011000 51773 50373 44416 44524 46524 44617 43587 35979 46224 40994 TRUE FALSE 55736.78069 47871.55007 45896.80727 40886.24677 44697.234 46314.9312 37863.97454 40681.57883 50244.47997 39656.36914 1.405493793 1.20715918 1.157362821 1.03101337 1.127113626 1.167906498 0.954801848 1.025852334 1.266996476 1 15.27526497 -4.333449044 1.025497315 1.081696211 1.911241008 0.562760021 0.08643333 3.045835599 1.386722066 0.027509772 3.453627469 4.64E-05 4.333449044 0.829544796 ATSAGSS(ph)PSCSLAGR ddPTM_A459_MK2206_30min_R1 2 ATSAGSSPSCSLAGR 15 0 Q9BXB5;Q9BXB5-2 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 1 ATSAGS(0.002)S(0.995)PS(0.003)CSLAGR;ATSAGS(0.225)S(0.772)PS(0.004)CSLAGR 226.88 1.11E-13 39583000 5848.6 4740.1 4610.9 3401.1 4559 4549.7 4234.1 4818.2 3654.7 3513.4 TRUE FALSE 5351.145858 4431.518628 4297.924955 3663.053311 4377.405376 4807.300082 3951.650915 4776.074985 4034.619143 3948.666517 1.355177966 1.122282322 1.088449717 0.927668441 1.108578138 1.217448995 1.000755799 1.209541238 1.021767507 1 11.94714982 -4.744590295 3.000502863 1.078861247 1.415279581 0.48494104 0.087017673 0.396527847 4.757464014 0.022021493 0.338849439 1.80E-05 4.744590295 0.336418335 ATSAGSS(ph)PSCSLAGR ddPTM_A459_MK2206_30min_R2 3 ATSAGSSPSCSLAGR 15 0 Q9BXB5;Q9BXB5-2 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 1 ATSAGS(0.025)S(0.972)PS(0.003)CSLAGR;ATSAGS(0.004)S(0.99)PS(0.006)CSLAGR;ATSAGS(0.228)S(0.766)PS(0.005)CSLAGR 186.69 2.28E-05 38693400 99387 99701 94938 99182 91929 99489 104061 74633 94763 83786 TRUE FALSE 106996.1451 94749.99332 98103.18554 91078.51333 88319.40555 103275.1236 90397.6657 84387.78935 103005.3144 81052.06968 1.320091462 1.169001528 1.210372368 1.123703734 1.089662558 1.274182436 1.115303607 1.041155268 1.270853599 1 16.30656141 -1.522878745 0.018878241 3.76E-10 2.624680693 0.322849118 0.082920349 4402.343844 6.431681088 337.3999807 589.0891804 0.03 1.522878745 2.624680693 ATSDTLES(ph)PPK ddPTM_A459_MK2206_30min_R1 1 ATSDTLESPPK 11 0 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 ATSDT(0.037)LES(0.963)PPK 114.24 0.0066371 4854600 2456.4 3018.2 3088.4 2173.8 2510.3 2037.2 2342.1 1919.3 3130.2 3226.5 TRUE FALSE 2247.470281 2821.714631 2878.768013 2341.226453 2410.309435 2152.544503 2185.862782 1902.519762 3455.595492 3626.223179 0.619782669 0.778141469 0.793875024 0.645637716 0.664688663 0.593605081 0.60279323 0.524656004 0.95294617 1 11.824252 -8.352036692 6.30826162 0.99036769 0.658659143 0.735227392 0.077688402 0.141107 7.92356196 0.082456194 0.02142843 4.45E-09 8.352036692 -0.331708546 ATSEEDVS(ph)IKSPICEK ddPTM_A459_MK2206_30min_R1 1 ATSEEDVSIKSPICEK 16 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ATSEEDVS(0.816)IKS(0.183)PICEK 95.5 0.0047638 43376000 11885 12934 12143 9427.4 7767.2 7796.9 9111.2 8343.2 11553 11175 TRUE FALSE 10874.11834 12091.99425 11318.76699 10153.49998 7457.815977 8238.35374 8503.408472 8270.256282 12753.97569 12559.44337 0.865812124 0.962781064 0.901215656 0.808435508 0.593801473 0.655948954 0.677052973 0.658489078 1.015488929 1 13.61648491 -3.206755168 8.982385428 0.796522308 1.093492249 0 0.15069105 0 0 0.036535824 0 0.000621219 3.206755168 0.296969942 ATSEEDVSIKS(ph)PICEK ddPTM_A459_MK2206_30min_R2 2 ATSEEDVSIKSPICEK 16 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ATS(0.001)EEDVS(0.362)IKS(0.637)PICEK;ATS(0.001)EEDVS(0.259)IKS(0.739)PICEK 65.765 0.030172 68107000 293445 232270 253572 234731 264008 165798 328235 248205 186027 285633 TRUE FALSE 315911.3748 220735.8096 262025.9639 215552.7264 253641.7194 172107.5591 285137.3502 280646.2457 202207.2922 276312.8186 1.143310601 0.798861995 0.948294637 0.780103969 0.91795133 0.622872149 1.031936744 1.015683048 0.731805688 1 18.07594297 -10.57353324 21.25360611 1 0.88494601 0.048375976 0.148690985 0 0 0.137891729 0.033443657 2.67E-11 10.57353324 -0.11505399 ATSGS(ph)SLPVGINR ddPTM_A459_MK2206_30min_R2 1 ATSGSSLPVGINR 13 0 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 AT(0.033)S(0.009)GS(0.805)S(0.153)LPVGINR 124.48 0.0018866 0 23524 30014 29689 29336 27766 25791 30931 21572 26836 29471 TRUE FALSE 25325.01553 28523.5484 30678.81644 26939.15496 26675.76733 26772.49458 26869.72255 24391.53447 29170.14677 28509.36368 0.888305183 1.000497546 1.076096148 0.944923053 0.935684417 0.939077241 0.942487628 0.855562219 1.023177756 1 14.79914822 -5.955718734 24.9999913 0.941168005 0.993017817 0.074191836 0.059560076 268.3726275 151514.1762 0.016512156 0.02449147 1.11E-06 5.955718734 0.051849812 ATSLGRPEEEEDELAHR ddPTM_A459_MK2206_30min_R1 1 ATSLGRPEEEEDELAHR 17 1 D6RER6;P36551-2;P36551 D6RER6 CPOX "Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial" 0 79.471 0.014056 3413500 3660.2 3309.5 3450.9 3064.9 4470 3822.8 4647.5 3770.7 3446.8 2918.7 FALSE TRUE 3348.88077 3094.050948 3216.662523 3300.959129 4291.950435 4039.243632 4337.473755 3737.733167 3805.107194 3280.290591 1.020909787 0.943224651 0.980602917 1.006300825 1.308405556 1.231367624 1.322283388 1.139451845 1.159990888 1 11.67960791 -6.16462245 6.354291731 1.208463928 0.981104974 0.565164669 0.087942584 0.164377414 9.069661317 0.025547181 0.033144344 6.85E-07 6.16462245 -0.227358955 ATSLGRPEEEEDELAHR ddPTM_A459_MK2206_30min_R2 2 ATSLGRPEEEEDELAHR 17 1 D6RER6;P36551-2;P36551 D6RER6 CPOX "Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial" 0 ; 77.24 0.016017 7782900 52270 61587 50040 62965 63251 67985 65880 43035 54250 63914 FALSE TRUE 56271.83139 58528.67914 51708.30862 57820.55808 60767.44793 70572.21681 57229.87686 48659.82226 58968.56694 61828.49141 0.910127841 0.946629584 0.836318458 0.935176595 0.982838923 1.141419032 0.925623051 0.787012931 0.95374423 1 15.91598418 -4.755127162 21.58930088 0.941708669 0.910127546 0.012236521 0.08971185 315.0828711 1077011.828 0.024077919 0.203583423 1.76E-05 4.755127162 -0.031581123 ATSPS(ph)SSVSGDFDDGHHSVSTPGPSR ddPTM_A459_MK2206_30min_R1 1 ATSPSSSVSGDFDDGHHSVSTPGPSR 26 0 Q86U86-8;Q86U86;E7EVG2;Q86U86-6;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;C9J409;C9JCJ2;C9J053;C9JQF1;C9JPI5 Q86U86-8 PBRM1 Protein polybromo-1 1 AT(0.04)S(0.177)PS(0.249)S(0.249)S(0.249)VS(0.035)GDFDDGHHSVSTPGPSR 114.33 5.77E-09 7594800 1416.5 797.96 799.24 826.97 1649.1 1633.2 1410.4 931.58 940.49 919.29 TRUE FALSE 1296.019237 746.012659 744.9898156 890.6633727 1583.412855 1725.670373 1316.314789 923.4352943 1038.257301 1033.178585 1.254400018 0.722055867 0.72106587 0.862061395 1.532564532 1.670253717 1.274043818 0.893780908 1.004915622 1 10.01287393 -6.22520975 22.45252659 1.248237688 0.865847476 0.280157932 0.264328895 234.0011025 145016.0299 0.085827202 0.110794144 5.95E-07 6.22520975 -0.382390211 ATSS(ph)SSGSLSATGR ddPTM_A459_MK2206_30min_R1 2 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 AT(0.035)S(0.218)S(0.693)S(0.049)S(0.004)GS(0.002)LSATGR;AT(0.001)S(0.038)S(0.881)S(0.055)S(0.017)GS(0.008)LSATGR 115.12 0.0028441 2538200 3149.2 2776.5 2905.7 2854.5 3661 3123.6 3621.6 3209.6 2322.09 2140.9 TRUE FALSE 2881.344003 2595.749345 2708.46918 3074.354085 3515.174618 3300.455533 3380.009672 3181.538806 2563.479565 2406.130855 1.197500958 1.078806392 1.125653318 1.277716911 1.460924127 1.371685802 1.4047489 1.322263417 1.06539491 1 11.23249939 -5.796002993 5.281302044 1.304185268 1.127592678 0.143360615 0.140221002 0.264725814 18.36180035 0.039388164 0.061563999 1.60E-06 5.796002993 -0.17659259 ATSS(ph)SSGSLSATGR ddPTM_A459_MK2206_30min_R2 1 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 AT(0.002)S(0.002)S(0.658)S(0.337)SGSLSATGR 225.72 4.42E-10 64194000 20755 22708 19505 28247 23772 28942 24753 15186 21391 21355 TRUE FALSE 22344.01876 21580.35374 20155.28696 25939.12974 22838.59184 30043.40809 21502.90137 17170.86234 23251.55051 20658.1881 1.08160593 1.044639232 0.975656087 1.255634309 1.105546707 1.45430993 1.040889998 0.831189176 1.12553678 1 14.3344261 -7.514128877 24.99799044 0.974225684 1.1512022 0.229761406 0.139964044 625.38882 1786723.269 0.064301834 0.039549666 3.06E-08 7.514128877 0.176976517 ATSSS(ph)SGSLSATGR ddPTM_A459_MK2206_30min_R1 1 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 ATSS(0.002)S(0.907)S(0.07)GS(0.02)LSATGR 225.72 4.42E-10 80602000 3333 3148.5 2976.7 2463.6 3316.4 2992.3 3371.4 2942.2 2655.7 2427.2 TRUE FALSE 3049.510848 2943.532078 2774.649898 2653.346899 3184.300765 3161.72144 3146.500057 2916.476656 2931.769519 2727.89986 1.117896918 1.07904697 1.017137739 0.972670199 1.167308526 1.159031343 1.153451453 1.069128929 1.074735023 1 11.41357497 -4.758624053 23.16969568 1.081758082 1.117897039 0.030460065 0.06434787 166.1129043 1366383.75 0.017370796 0.115088037 1.74E-05 4.758624053 0.036138956 ATSSS(ph)SGSLSATGR ddPTM_A459_MK2206_30min_R2 2 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 ATSS(0.005)S(0.938)S(0.023)GS(0.035)LSATGR;ATS(0.001)S(0.024)S(0.447)S(0.447)GS(0.08)LSATGR 155.14 0.00033062 76852000 33506 43133 43336 47686 36761 48656 37193 31630.1 38087 34029 TRUE FALSE 36071.24512 40991.07794 44780.80061 43789.90126 35317.57843 50507.63817 32309.51442 35764.26267 41399.73841 32918.63652 1.09576972 1.245224052 1.360347978 1.330246508 1.072874887 1.534317442 0.981496132 1.086444229 1.257638311 1 15.00661696 -7.3082771 24.9999649 1.088598383 1.269320397 0.306023335 0.141213536 562.8771029 300437.5686 0.05754297 0.038795567 4.92E-08 7.3082771 0.180722014 ATSSSNPSS(ph)PAPDWYK ddPTM_A459_MK2206_30min_R2 1 ATSSSNPSSPAPDWYK 16 0 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 ATSSSNPS(0.075)S(0.925)PAPDWYK 126.91 0.0010814 5152500 18547 11676 14650 18428 13914 14675 29344 27574 21239 40955 TRUE FALSE 19966.97258 11096.18682 15138.42369 16922.37345 13367.66645 15233.46741 25491.09755 31178.01648 23086.32983 39618.6417 0.503979231 0.280074893 0.382103551 0.427131591 0.337408499 0.384502516 0.643411699 0.78695319 0.582713814 1 15.2738918 -8.034723044 0.593701675 0.970751173 0.354082935 0.774949778 0.101340926 0.338326749 0.270106386 0.100541827 0.051607702 9.23E-09 8.034723044 -0.616668238 ATSSSS(ph)GSLSATGR ddPTM_A459_MK2206_30min_R2 2 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 ATS(0.001)S(0.001)S(0.275)S(0.626)GS(0.097)LSATGR;AT(0.01)S(0.178)S(0.025)S(0.025)S(0.638)GS(0.124)LS(0.001)ATGR 185.32 7.92E-05 17932100 19009.2 34714 29493 36860 41655 46641 27918 27331 39904 26365 TRUE FALSE 20464.55897 32990.15324 30476.2819 33848.42009 40019.4154 48415.95594 24252.33306 30903.25554 43374.77779 25504.71221 0.80238345 1.293492472 1.194927496 1.327143777 1.569098881 1.898314144 0.950896166 1.211668467 1.700657409 1 14.6384762 -4.377834023 1.224805592 1.387291669 7.70E-16 0.251810427 0.28291225 5.121516894 3.404765531 0.085706372 11.44040562 4.19E-05 4.377834023 -1.387291669 ATSSSSGS(ph)LSATGR ddPTM_A459_MK2206_30min_R1 2 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 ATSS(0.001)S(0.006)S(0.224)GS(0.77)LSATGR;ATS(0.006)S(0.004)S(0.025)S(0.089)GS(0.872)LS(0.005)ATGR 209.11 5.45E-06 30432000 4895.4 3957.7 4025.7 3668.7 5485.6 5185.9 5507.8 4686.3 4298.8 3149.8 TRUE FALSE 4479.020523 3700.053011 3752.4467 3951.26391 5267.096936 5479.521176 5140.384712 4645.328173 4745.675643 3540.021004 1.265252528 1.045206513 1.060006903 1.116169623 1.487871662 1.547878154 1.452077461 1.312231811 1.340578386 1 11.7895422 -6.246628741 23.72995058 1.386704985 1.111794235 0.35718578 0.151123845 393.3630574 630254.3548 0.043852416 0.056325123 5.67E-07 6.246628741 -0.274910751 ATSSSSGS(ph)LSATGR ddPTM_A459_MK2206_30min_R2 2 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 ATS(0.001)SS(0.001)S(0.025)GS(0.965)LS(0.008)ATGR;AT(0.012)S(0.168)S(0.168)S(0.019)S(0.073)GS(0.559)LS(0.001)ATGR 162.67 0.00027391 17938200 21955.2 35329 25067 41385 32049 54574 26597 22720 35793 18057 TRUE FALSE 23636.10699 33574.61323 25902.72127 38003.71312 30790.59523 56650.85181 23104.78195 25689.58201 38906.21044 17467.80157 1.353124313 1.922085793 1.482883874 2.175643739 1.762705805 3.243158653 1.322706917 1.470682038 2.227310076 1 14.09241043 -5.749312331 24.99359373 1.933578149 1.619636774 0.045899018 0.594077706 767.8614135 1582532.56 0.160077309 0.274610537 1.78E-06 5.749312331 -0.313941376 ATSSSSGSLS(ph)ATGR ddPTM_A459_MK2206_30min_R1 2 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 ATSSSSGSLS(0.9)AT(0.1)GR;ATSSSSGSLS(1)ATGR 177.38 7.03E-05 11004000 3515.6 3318.6 3102.9 2932.9 3754.1 3652.9 4504.2 3098.6 2787.2 2866.8 TRUE FALSE 3216.579759 3102.558537 2892.283793 3158.792466 3604.566248 3859.724041 4203.733036 3071.509267 3076.939414 3221.960827 0.998329878 0.96294111 0.897678137 0.980394435 1.118749246 1.197942572 1.304712646 0.953304348 0.954989703 1 11.65372324 -6.18625373 4.770071306 1.102196629 0.95258582 0.26006299 0.104982652 0.3089718 13.09316444 0.034504047 0.044780587 6.51E-07 6.18625373 -0.149610809 ATST(ph)SPNSQSSK ddPTM_A459_MK2206_30min_R1 1 ATSTSPNSQSSK 12 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 ATS(0.001)T(0.905)S(0.071)PNS(0.021)QS(0.001)SK 121.21 0.0089878 1723600 2248.8 2033.9 1402.2 1590.7 1330 846.03 1997.4 1655.5 426.39 1038.8 TRUE FALSE 2057.527751 1901.49274 1307.022571 1713.21599 1277.023284 893.9314875 1864.15709 1641.026138 470.7147664 1167.494387 1.762344877 1.628695403 1.119510797 1.467429745 1.093815352 0.765683756 1.596716106 1.405596598 0.403183751 1 10.1891999 -1.522878745 0.359369086 1.017164922 10.81236572 0.368510987 0.322458909 75.70175799 1.057274374 0.269001784 506.9167172 0.03 1.522878745 9.795200803 ATST(ph)SPNSQSSK ddPTM_A459_MK2206_30min_R2 2 ATSTSPNSQSSK 12 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 ATS(0.099)T(0.671)S(0.225)PNS(0.005)QSSK;ATS(0.002)T(0.58)S(0.377)PNS(0.03)QS(0.011)S(0.001)K 190.35 0.00025925 12249100 30197 18616.9 21713 20629.4 25713 28114 25812 164795 63673 27695 TRUE FALSE 32508.90554 17692.41182 22436.90058 18943.91203 24703.37842 29183.89797 22422.85339 186334.2723 69211.16245 26791.31442 1.213412117 0.660378641 0.837469197 0.70709155 0.922066683 1.089304448 0.836944879 6.955025402 2.583343294 1 14.70947774 -7.641230303 23.17508051 3.84163562 0.884847168 0.417880508 1.3996283 3.433206592 667.5653825 0.605230473 0.349429564 2.28E-08 7.641230303 -2.956788452 ATSTS(ph)PNSQSSK ddPTM_A459_MK2206_30min_R2 1 ATSTSPNSQSSK 12 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 AT(0.013)S(0.274)T(0.157)S(0.54)PNS(0.016)QSSK 180.3 0.00010397 7127700 15413 8525.6 11947 10435 13606 10956 12556 91913 37067 14697 TRUE FALSE 16593.03113 8102.231101 12345.30702 9582.42712 13071.76008 11372.93826 10907.38212 103926.3447 40291.02066 14217.43809 1.167090092 0.569879823 0.868321489 0.673991127 0.919417408 0.799928804 0.767183373 7.309780004 2.833915674 1 13.7953739 -7.670856466 24.99999996 4.054307861 0.812604494 0.442919679 1.470946564 13.52955751 3728.947086 0.636524446 0.36749739 2.13E-08 7.670856466 -3.241703367 ATSTSPNS(ph)QSSK ddPTM_A459_MK2206_30min_R1 1 ATSTSPNSQSSK 12 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 ATS(0.001)T(0.062)S(0.062)PNS(0.751)QS(0.095)S(0.03)K 103.76 0.012042 0 1663.7 1398.9 643.9 1201.7 870.67 795.65 1200.9 1280.2 264.95 594.21 TRUE FALSE 1522.193579 1307.831356 600.193862 1294.255142 835.9893702 840.6990154 1120.790152 1269.007346 292.4925006 667.8252209 2.279329278 1.958343763 0.898728954 1.938014771 1.251808623 1.258860835 1.67826868 1.900208777 0.43797762 1 9.383326769 -5.061344103 5.847987706 1.362227527 2.209637024 0.359327004 0.441649771 0.202653841 14.18257956 0.107707338 0.307681036 8.68E-06 5.061344103 0.847409497 ATSVALPGWS(ph)PSETR ddPTM_A459_MK2206_30min_R1 1 ATSVALPGWSPSETR 15 0 Q16513-3;Q16513-2;Q16513;Q16513-4;B1AL79;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 ATSVALPGWS(0.97)PS(0.03)ETR 228.11 9.60E-14 14409000 3671.4 2949.2 2898.9 2400 3475.5 2933.9 2903.5 3046.9 2664 2543.2 TRUE FALSE 3359.128151 2757.206544 2702.130745 2584.848416 3337.063476 3100.014883 2709.812813 3020.261275 2940.932333 2858.270816 1.175230888 0.964641464 0.945372541 0.904339925 1.1675113 1.084577033 0.948060204 1.056674286 1.028920114 1 11.4809269 -4.750768566 24.81880395 1.01271331 1.175231265 0.308599453 0.073657433 571.4645678 1329049.943 0.019482695 0.272150488 1.78E-05 4.750768566 0.162517955 ATSVALPGWS(ph)PSETR ddPTM_A459_MK2206_30min_R2 3 ATSVALPGWSPSETR 15 0 Q16513-3;Q16513-2;Q16513;Q16513-4;B1AL79;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 ATSVALPGWS(0.83)PS(0.161)ET(0.009)R;ATSVALPGWS(0.896)PS(0.1)ET(0.004)R;ATSVALPGWS(0.885)PS(0.104)ET(0.011)R 182.7 2.07E-05 16978900 86431 85098 84718 100687 91209 90559 94113 77152 83862 94473 TRUE FALSE 93048.22381 80872.15706 87542.45584 92460.55002 87627.67637 94005.2862 81755.85005 87236.0313 91156.16517 91390.35375 1.018140537 0.884909115 0.957896017 1.011710167 0.958828506 1.028612784 0.894578549 0.954543097 0.997437491 1 16.47975428 -5.855846527 0.003755219 1.92616448 3.76E-08 0.024885033 0.046923622 143876.8185 126.1358671 31767.64997 32934.36376 1.39E-06 5.855846527 -1.926164442 ATSVALPGWSPS(ph)ETR ddPTM_A459_MK2206_30min_R1 1 ATSVALPGWSPSETR 15 0 Q16513-3;Q16513-2;Q16513;Q16513-4;B1AL79;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 ATSVALPGWS(0.467)PS(0.532)ET(0.001)R 213 6.32E-07 13331000 6977.7 6281.5 5713.6 4949.1 6777.6 5289.8 6535.7 5424.4 5196.6 5190.7 TRUE FALSE 6384.209974 5872.573208 5325.776751 5330.28054 6507.63384 5589.303905 6099.715378 5376.975043 5736.805166 5833.763104 1.094355369 1.006652671 0.912923041 0.913695062 1.115512187 0.958095796 1.04558846 0.921699244 0.983379864 1 12.51021109 -8.411619578 0.003984974 5.92E-05 1.97028169 0.012643641 0.06836148 55471.5505 163.9140573 40689.42884 40342.13264 3.88E-09 8.411619578 1.970222526 ATT(ph)PADGEEPAPEAEALAAAR ddPTM_A459_MK2206_30min_R1 1 ATTPADGEEPAPEAEALAAAR 21 0 Q5JZ02;Q96S44 Q5JZ02 TP53RK TP53-regulating kinase 1 AT(0.094)T(0.906)PADGEEPAPEAEALAAAR 240.34 1.03E-30 6033800 740.23 658.2 845.35 676.75 1007.8 732.58 890.18 601.82 819.49 467.03 TRUE FALSE 677.2695514 615.3510604 787.9699973 728.8734023 967.6571919 774.0580465 830.7977164 596.5583512 904.6789181 524.8892023 1.290309552 1.172344673 1.501212054 1.38862335 1.843545624 1.474707506 1.582805881 1.136541481 1.723561685 1 9.035869109 -11.32263596 2.741755407 0.871728562 1.454139294 0.292398161 0.213267159 14087973.84 11707395.99 12083833.04 0.054085438 4.76E-12 11.32263596 0.582410732 ATT(ph)PADGEEPAPEAEALAAAR ddPTM_A459_MK2206_30min_R2 4 ATTPADGEEPAPEAEALAAAR 21 0 Q5JZ02;Q96S44 Q5JZ02 TP53RK TP53-regulating kinase 1 AT(0.198)T(0.802)PADGEEPAPEAEALAAAR;AT(0.17)T(0.83)PADGEEPAPEAEALAAAR;AT(0.05)T(0.95)PADGEEPAPEAEALAAAR;AT(0.182)T(0.818)PADGEEPAPEAEALAAAR 193.19 3.98E-16 29616900 68018.5 93042.1 87501.5 119679.5 93876.2 103446.4 87559.7 86585.6 92567.8 84870.9 TRUE FALSE 73226.04866 88421.76461 90418.75634 109901.302 90190.1487 107383.1252 76063.00621 97902.63521 100619.1799 82101.56948 0.891895845 1.076980199 1.101303628 1.338601719 1.098519179 1.307930237 0.926450087 1.192457536 1.225545146 1 16.32512218 -4.756081771 1.876200679 1.15844816 0.798120061 0.292388378 0.120701173 1.086482435 3.826523832 0.031654932 0.710218949 1.75E-05 4.756081771 -0.360328099 ATT(ph)PASTANSDVATIPTDTPLKEENEGFVK ddPTM_A459_MK2206_30min_R2 4 ATTPASTANSDVATIPTDTPLKEENEGFVK 30 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 AT(0.132)T(0.541)PAS(0.146)T(0.146)ANS(0.035)DVAT(0.001)IPTDTPLKEENEGFVK;AT(0.217)T(0.65)PAS(0.018)T(0.018)ANS(0.018)DVAT(0.018)IPT(0.057)DT(0.003)PLKEENEGFVK;AT(0.065)T(0.476)PAS(0.186)T(0.186)ANS(0.084)DVAT(0.002)IPT(0.002)DTPLKEENEGFVK;AT(0.047)T(0.476)PAS(0.178)T(0.178)ANS(0.077)DVAT(0.038)IPT(0.006)DTPLKEENEGFVK 79.382 3.63E-05 33028400 134136 140018 136114 129579 151191 102098 148872 116078 131085 146411 TRUE FALSE 144405.5553 133064.9097 140651.9728 118991.9812 145254.4817 105983.4109 129324.9276 131249.7932 142486.5364 141633.6211 1.01957116 0.939500867 0.993069102 0.84013937 1.025564979 0.748292744 0.913094833 0.92668529 1.006021983 1 17.11180425 -3.840976502 14.91162458 0.933949115 89.44645963 0 0.085184525 0 0 0.018909783 0 0.000144219 3.840976502 88.51251051 ATT(ph)PPNQGRPDS(ph)PVYANLQELK ddPTM_A459_MK2206_30min_R1 3 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 2 AT(0.051)T(0.95)PPNQGRPDS(0.998)PVY(0.001)ANLQELK;AT(0.035)T(0.966)PPNQGRPDS(0.959)PVY(0.041)ANLQELK;AT(0.174)T(0.834)PPNQGRPDS(0.949)PVY(0.042)ANLQELK 86.32 0.0019798 116180000 17273.1 18926.6 18528.2 15135.3 17126.4 15614.9 15774.6 16548.2 15742.4 13842.7 TRUE FALSE 15803.93214 17694.4749 17270.55741 16301.02343 16444.21922 16499.00214 14722.30522 16403.52083 17378.87881 15557.63818 1.015831063 1.137349686 1.110101495 1.047782654 1.056986866 1.060508154 0.946307212 1.054370891 1.117064082 1 13.92533544 -5.861427373 5.689783966 1.039624345 1.092474825 0.155234172 0.050449364 0.365477555 17.38551127 0.01456328 0.021973521 1.38E-06 5.861427373 0.052850479 ATT(ph)PPNQGRPDS(ph)PVYANLQELK ddPTM_A459_MK2206_30min_R2 3 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 2 AT(0.134)T(0.866)PPNQGRPDS(0.82)PVY(0.18)ANLQELK;AT(0.058)T(0.942)PPNQGRPDS(0.985)PVY(0.014)ANLQELK;AT(0.056)T(0.947)PPNQGRPDS(0.995)PVY(0.003)ANLQELK 99.86 0.00048467 113418900 269009 351427 355196 362428 343074 328172 346946 307843 294189 331084 TRUE FALSE 289604.5359 333975.6462 367038.0574 332816.4731 329603.191 340660.8154 301391.5734 348079.1371 319777.0274 320280.7562 0.904220845 1.042759016 1.145988481 1.039139775 1.029107071 1.063631857 0.941023048 1.086793791 0.998427228 1 18.28897759 ATT(ph)PPNQGRPDSPVYANLQELK ddPTM_A459_MK2206_30min_R1 1 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 AT(0.183)T(0.8)PPNQGRPDS(0.016)PVY(0.001)ANLQELK 62.582 0.014765 13767000 2443.4 2403 2522.7 2219.9 2308.2 2213.7 1912.7 2209.8 1657.3 1705.5 TRUE FALSE 2235.575999 2246.564263 2351.466153 2390.877083 2216.259506 2339.037781 1785.107273 2190.479952 1829.582266 1916.790216 1.166312297 1.172044935 1.226772827 1.247333726 1.156234776 1.220288878 0.931300284 1.142785441 0.954503133 1 10.90447673 -7.247982429 24.91542726 1.019046 1.198606762 0.714756423 0.05892445 404.3251864 748605.3225 0.021461844 0.016527579 5.65E-08 7.247982429 0.179560761 ATT(ph)PPNQGRPDSPVYANLQELK ddPTM_A459_MK2206_30min_R2 2 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 AT(0.044)T(0.956)PPNQGRPDSPVYANLQELK;AT(0.083)T(0.916)PPNQGRPDSPVYANLQELK 96.723 0.00026948 34628000 43709 50603 48194 48723 47142 46686 49349 39838 39327 42414 TRUE FALSE 47055.39465 48090.1286 49800.76391 44742.17504 45290.96821 48462.66844 42869.41702 45044.96338 42747.59137 41030.03465 1.146852423 1.172071362 1.213763633 1.090473733 1.103849134 1.181151048 1.044830144 1.097853408 1.041860962 1 15.32439275 -7.648238289 0.377832134 0.993084084 1.182133127 0.641735564 0.03906288 0.774079254 0.306263975 0.049092509 0.048105249 2.25E-08 7.648238289 0.189049043 ATT(ph)PSLPSVDNEFK ddPTM_A459_MK2206_30min_R1 1 ATTPSLPSVDNEFK 14 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 AT(0.011)T(0.989)PSLPSVDNEFK 261.45 1.63E-35 8354500 3321.9 3059.8 3070.7 2920.7 2726.8 2776.8 3405.3 3213.9 3446.6 2847.7 TRUE FALSE 3039.354961 2860.606464 2862.269439 3145.65282 2618.185782 2934.020016 3178.13865 3185.801211 3804.886404 3200.494575 0.949651652 0.893801379 0.894320978 0.9828646 0.818056622 0.916739569 0.993014853 0.995409033 1.18884326 1 11.64407915 -7.70623754 1.819233462 1.086858375 0.908320191 0.559619224 0.062093417 0.249496916 1.607293064 0.042273222 0.017851516 1.97E-08 7.70623754 -0.178538184 ATT(ph)PSLPSVDNEFK ddPTM_A459_MK2206_30min_R2 1 ATTPSLPSVDNEFK 14 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 AT(0.001)T(0.999)PS(0.001)LPSVDNEFK 140.33 0.0013175 20976000 43429 38977 43205 34683 31932 25363 39206 25223 35234 32907 TRUE FALSE 46753.95763 37041.45886 44645.43314 31849.28795 30678.18923 26328.20674 34058.20511 28519.7327 38298.58963 31833.24728 1.468714681 1.163609183 1.40247813 1.000503897 0.963715356 0.827066322 1.069894152 0.895910255 1.203100309 1 14.95824671 -5.771066206 24.69049089 0.984881466 1.326801512 0.645191035 0.118779965 98.31666572 252159.0089 0.031773993 0.047826485 1.69E-06 5.771066206 0.341920046 ATTPPNQGRPDS(ph)PVYANLQELK ddPTM_A459_MK2206_30min_R1 4 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 ATT(0.007)PPNQGRPDS(0.911)PVY(0.082)ANLQELK;AT(0.002)T(0.015)PPNQGRPDS(0.98)PVY(0.003)ANLQELK;ATTPPNQGRPDS(1)PVYANLQELK;ATT(0.001)PPNQGRPDS(0.937)PVY(0.062)ANLQELK 139.79 5.30E-06 97896000 9220.1 9790.9 9154.4 8424.6 9481.6 7926.3 8616.6 9622.8 8247.7 7591.8 TRUE FALSE 8435.882078 9153.51063 8533.024834 9073.464152 9103.927794 8375.080256 8041.802336 9538.668874 9105.07793 8532.329499 0.988696238 1.072803228 1.000081494 1.063421678 1.066992056 0.981570186 0.942509585 1.11794427 1.067126853 1 13.05872397 -7.785645632 24.99840791 1.069401606 1.020503483 0.148042007 0.047900105 435.1280581 449361.421 0.026438525 0.012711549 1.64E-08 7.785645632 -0.048898124 ATTPPNQGRPDS(ph)PVYANLQELK ddPTM_A459_MK2206_30min_R2 4 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 AT(0.092)T(0.317)PPNQGRPDS(0.544)PVY(0.047)ANLQELK;ATTPPNQGRPDS(0.985)PVY(0.015)ANLQELK;ATT(0.001)PPNQGRPDS(0.945)PVY(0.055)ANLQELK;ATTPPNQGRPDS(0.998)PVY(0.001)ANLQELK 108.13 3.09E-05 149062300 63845.9 69876.9 64553.7 70946.3 62832.6 53554.2 74438.2 65302.7 60749.9 68146.1 TRUE FALSE 68733.99119 66406.91476 66705.88814 65149.76034 60365.47642 55592.24261 64664.37492 73837.98711 66033.81649 65922.49834 1.042648457 1.007348272 1.011883497 0.988278084 0.915703712 0.843296962 0.980915113 1.120072645 1.001688622 1 16.0084833 -10.06653207 6.968405166 1.000000705 0.988323658 0.001140682 0.069112872 0 0 0.074548103 0.018080571 8.58E-11 10.06653207 -0.011677046 ATTPT(ph)ALMPLPRAST(ph)PT(ph)AS(ph)LPPVSSESSR ddPTM_A459_MK2206_30min_R2 1 ATTPTALMPLPRASTPTASLPPVSSESSR 29 1 H0YFT5 H0YFT5 FERMT3 4 AT(0.164)T(0.164)PT(0.674)ALMPLPRAS(0.316)T(0.743)PT(0.769)AS(0.769)LPPVS(0.119)S(0.119)ES(0.119)S(0.041)R 41.763 0.044215 0 7273 7690 8885 9499 8846.9 8271.2 9138.1 7724.6 8095.8 8188 TRUE FALSE 7829.826472 7308.125782 9181.221465 8722.901314 8499.526254 8585.966312 7938.256493 8734.231743 8799.95805 7920.826231 0.98851133 0.922646902 1.159124212 1.101261543 1.073060563 1.083973573 1.002200561 1.102692003 1.110989914 1 12.95143521 -5.248253852 24.99567187 1.080824835 0.955579105 0.516111675 0.047843761 597.4761756 1132624.993 0.012040113 0.031452715 5.65E-06 5.248253852 -0.12524573 ATVPVAAATAAEGEGS(ph)PPAVAAVAGPPAAAEVGGGVGGSSR ddPTM_A459_MK2206_30min_R1 1 ATVPVAAATAAEGEGSPPAVAAVAGPPAAAEVGGGVGGSSR 41 0 O75179-4;O75179-6;O75179-2;O75179;H0YLQ3;A0A1W2PQ15;O75179-5;O75179-3 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 ATVPVAAATAAEGEGS(1)PPAVAAVAGPPAAAEVGGGVGGSSR 114.49 3.38E-24 7471700 481.64 181.79 310.64 316.3 399.36 359.37 477.66 328.71 213.86 307.93 TRUE FALSE 440.6739888 169.955438 289.5546223 340.6614808 383.4526455 379.7172188 445.7961729 325.8361231 236.0915123 346.0786932 1.273334642 0.491088996 0.83667278 0.984346877 1.107992642 1.097199066 1.288135276 0.941508765 0.682190256 1 8.434956312 -5.829886587 4.286962087 1.034234609 0.828697073 0.072614031 0.227955974 0.436817897 15.59924581 0.065324898 0.102463763 1.48E-06 5.829886587 -0.205537536 ATVPVAAATAAEGEGS(ph)PPAVAAVAGPPAAAEVGGGVGGSSR ddPTM_A459_MK2206_30min_R2 2 ATVPVAAATAAEGEGSPPAVAAVAGPPAAAEVGGGVGGSSR 41 0 O75179-4;O75179-6;O75179-2;O75179;H0YLQ3;A0A1W2PQ15;O75179-5;O75179-3 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 ATVPVAAAT(0.001)AAEGEGS(0.999)PPAVAAVAGPPAAAEVGGGVGGSSR;ATVPVAAATAAEGEGS(1)PPAVAAVAGPPAAAEVGGGVGGSSR 115.94 2.83E-29 15604900 7180.4 7248.9 5968 8593.9 11241.9 9733.1 9449.6 5565.2 9397.7 10535.5 TRUE FALSE 7730.136945 6888.930167 6166.970141 7891.750879 10800.48652 10103.49994 8208.856169 6292.590748 10215.09496 10191.7275 0.758471706 0.675933513 0.605095666 0.77432907 1.0597307 0.991343219 0.805443059 0.617421409 1.002292787 1 13.31511099 -6.004927931 22.34312191 0.894407334 0.681154918 0.413105297 0.124877327 61.11295424 277098.7748 0.038041876 0.054520516 9.89E-07 6.004927931 -0.213252416 ATVT(ph)PSPVK ddPTM_A459_MK2206_30min_R1 1 ATVTPSPVK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 AT(0.005)VT(0.781)PS(0.214)PVK 123.86 0.012843 863160000 12612 14855 13827 10296 10103 9443.4 12566 9502.9 14439 16532 TRUE FALSE 11539.28317 13887.9368 12888.46176 11088.9997 9700.576117 9978.077147 11727.74507 9419.817147 15939.98572 18580.10897 0.621055732 0.747462613 0.693669869 0.596821026 0.522094684 0.537030066 0.631198939 0.506983956 0.857905933 1 14.18147134 -8.458516344 4.254837158 0.997969 0.610857569 0.773166813 0.071620723 0.096272935 3.366203374 0.076593861 0.020046622 3.48E-09 8.458516344 -0.387111431 ATVTPS(ph)PVK ddPTM_A459_MK2206_30min_R1 4 ATVTPSPVK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 AT(0.001)VT(0.15)PS(0.85)PVK;AT(0.002)VT(0.192)PS(0.805)PVK;ATVT(0.171)PS(0.829)PVK;ATVT(0.162)PS(0.838)PVK 141.71 0.0021829 4004528000 56101.7 59815 59305.7 44797.3 41772.1 42743.2 54682.8 41526 60753 66162 TRUE FALSE 51329.95581 55921.03263 55280.19432 48247.59581 40108.2288 45163.28305 51035.01019 41162.94256 67068.49176 74358.64806 0.690302435 0.752044773 0.743426565 0.648849825 0.539388892 0.607370954 0.686335907 0.553573036 0.901959537 1 16.18221292 -8.422514106 4.564262804 0.996784291 0.655474513 0.759452626 0.068061673 0.106071509 3.384533341 0.072201776 0.018863319 3.78E-09 8.422514106 -0.341309777 ATVTPS(ph)PVK ddPTM_A459_MK2206_30min_R2 8 ATVTPSPVK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 AT(0.002)VT(0.377)PS(0.621)PVK;AT(0.004)VT(0.141)PS(0.855)PVK;AT(0.007)VT(0.054)PS(0.938)PVK;ATVT(0.194)PS(0.806)PVK;AT(0.001)VT(0.149)PS(0.851)PVK;ATVT(0.027)PS(0.973)PVK;ATVT(0.079)PS(0.921)PVK;ATVT(0.015)PS(0.985)PVK 119.03 0.007027 10559405000 12227080 10242446 10477245 9908903 8889113 6908333 11799965 9491752 6879310 10526756 TRUE FALSE 13163194.65 9733821.026 10826551.12 9099313.928 8540081.759 7171234.453 10250615.42 10732356.58 7477659.949 10183268.81 1.292629595 0.955864095 1.063170512 0.893555311 0.838638547 0.704217338 1.006613457 1.05392058 0.734308412 1 23.2796974 -1.522881326 0.895723671 0.894463215 188.55494 0.490139422 0.117128824 781.601687 1.760684959 0.040266208 299746.4366 0.029999822 1.522881326 187.6604768 ATVTPS(ph)PVKGK ddPTM_A459_MK2206_30min_R2 1 ATVTPSPVKGK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 ATVT(0.015)PS(0.985)PVKGK 130.15 0.011622 619900000 37059 72003 59612 66494 69818 55711 78835 47166 66767 57867 TRUE FALSE 39896.26553 68427.43572 61599.43433 61061.2275 67076.59451 57831.12114 68483.8698 53330.75815 72574.27297 55978.80453 0.712703064 1.222381155 1.100406392 1.090791917 1.198249857 1.033089607 1.223389288 0.952695553 1.296459858 1 15.77259306 -4.752904081 24.99582048 1.123469173 0.712702293 0.581929519 0.104624098 211.3690707 618952.2647 0.023244055 0.264350744 1.77E-05 4.752904081 -0.41076688 AVAEEDNGSIGEETDSS(ph)PGRK ddPTM_A459_MK2206_30min_R2 1 AVAEEDNGSIGEETDSSPGRK 21 1 E9PNJ4;G0XQ39;Q13586 E9PNJ4 STIM1 Stromal interaction molecule 1 1 AVAEEDNGSIGEET(0.017)DS(0.339)S(0.643)PGRK 75.43 0.017703 0 7360.9 5073.2 5305.2 8332 8417.1 8176.7 10284 6040.1 8757.4 7252.1 TRUE FALSE 7924.456164 4821.272265 5482.07272 7651.248947 8086.602361 8487.870048 8933.698447 6829.561809 9519.102822 7015.464571 1.129569693 0.687234925 0.781426898 1.090626126 1.152682375 1.209879968 1.273429344 0.973501005 1.356874192 1 12.77632293 -5.881885189 4.601099817 1.164138303 0.849583106 0.434489648 0.149996508 0.179528668 6.399887476 0.041091226 0.062727879 1.31E-06 5.881885189 -0.314555197 AVAGVMIT(ph)ASHNR ddPTM_A459_MK2206_30min_R2 1 AVAGVMITASHNR 13 0 Q6PCE3 Q6PCE3 PGM2L1 "Glucose 1,6-bisphosphate synthase" 1 AVAGVMIT(0.932)AS(0.068)HNR 152.34 0.00059829 9527400 46326 59393 51570 52332 49747 51852 48885 41772 44573 38138 TRUE FALSE 49872.75418 56443.62999 53289.31806 48056.3082 47793.68282 53825.26419 42466.34078 47231.74382 48449.87897 36893.56018 1.351801071 1.529904669 1.44440704 1.3025663 1.295447839 1.458933861 1.151050226 1.280216482 1.313234037 1 15.17108139 -13.59267843 0.087027111 3.46E-09 1.679815097 0.643560851 0.087093185 112.0352191 0.819949526 22.48680119 2.463401831 2.55E-14 13.59267843 1.679815093 AVAGVMITAS(ph)HNR ddPTM_A459_MK2206_30min_R1 4 AVAGVMITASHNR 13 0 Q6PCE3 Q6PCE3 PGM2L1 "Glucose 1,6-bisphosphate synthase" 1 AVAGVMIT(0.001)AS(0.999)HNR;AVAGVMITAS(1)HNR;AVAGVMIT(0.043)AS(0.957)HNR;AVAGVMIT(0.028)AS(0.972)HNR 232.78 2.48E-13 82931600 9632.4 8238.1 8727.2 8154.9 9531.8 8178.8 9162.6 7902.65 6933.19 6963.25 TRUE FALSE 8813.113798 7701.798193 8134.821979 8782.991811 9152.128222 8641.876588 8551.379672 7833.557964 7653.919911 7825.90998 1.126145563 0.984140913 1.039472981 1.122296555 1.169465052 1.104264758 1.092701001 1.000977265 0.978022994 1 12.9340428 -7.790137976 5.362888762 0.990095673 1.090009896 0.46952457 0.047880479 0.186311429 14.13675228 0.029330537 0.014336312 1.62E-08 7.790137976 0.099914224 AVAGVMITAS(ph)HNR ddPTM_A459_MK2206_30min_R2 11 AVAGVMITASHNR 13 0 Q6PCE3 Q6PCE3 PGM2L1 "Glucose 1,6-bisphosphate synthase" 1 AVAGVMIT(0.47)AS(0.53)HNR;AVAGVMIT(0.287)AS(0.713)HNR;AVAGVMIT(0.267)AS(0.733)HNR;AVAGVMIT(0.019)AS(0.981)HNR;AVAGVMIT(0.449)AS(0.551)HNR;AVAGVMIT(0.129)AS(0.871)HNR;AVAGVMIT(0.005)AS(0.995)HNR;AVAGVMIT(0.048)AS(0.952)HNR;AVAGVMIT(0.06)AS(0.94)HNR;AVAGVMIT(0.01)AS(0.99)HNR;AVAGVMIT(0.008)AS(0.992)HNR 182.02 7.26E-05 192724900 552894 729569 603657 662157.2 623453 633299 562741 478472.5 527771.5 506030 TRUE FALSE 595223.9897 693339.6644 623782.6231 608056.8386 598973.1026 657399.6372 488852.4307 541010.4986 573676.1111 489518.2825 1.215938221 1.416371337 1.274278501 1.242153481 1.223597001 1.342952165 0.998639782 1.105189567 1.171919684 1 18.90100322 -7.25766703 24.99973178 1.077703053 1.286466932 0.679934752 0.072818931 202.6947082 1343283.022 0.028671721 0.021342151 5.53E-08 7.25766703 0.208763879 AVAHHTDCTFIR ddPTM_A459_MK2206_30min_R2 2 AVAHHTDCTFIR 12 0 P62195-2;P62195;J3QSA9;J3QQM1;J3QRW1;J3QLH6;J3KRP2;J3QRR3 P62195-2 PSMC5 26S protease regulatory subunit 8 0 ; 100.55 0.0075253 5859800 12523.7 24795 21066.1 25419 24903 31582 26948 15880.2 27494 17506.7 FALSE TRUE 13482.5241 23563.71636 21768.43326 23342.18639 23925.18309 32783.87514 23409.69523 17955.79666 29885.37842 16935.45781 0.796112172 1.391383488 1.285376132 1.37830265 1.412727271 1.935812749 1.382288893 1.060248673 1.764663155 1 14.04775937 -4.757443774 5.122086522 1.417517597 0.756736681 0.315379781 0.26672777 0.210792086 15.10857075 0.065505441 0.501902638 1.75E-05 4.757443774 -0.660780916 AVAS(ph)PEATVSQTDENK ddPTM_A459_MK2206_30min_R1 3 AVASPEATVSQTDENK 16 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2;A0A087WYF6 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 AVAS(0.999)PEAT(0.001)VSQTDENK;AVAS(1)PEATVSQTDENK;AVAS(0.997)PEAT(0.003)VSQTDENK 302.4 3.50E-88 91956700 12016.5 12568.2 12510.7 10402.5 10586.5 9151.8 10682.1 10897.3 11185.1 9508.1 TRUE FALSE 10994.43357 11750.0079 11661.50854 11203.70235 10164.81729 9669.967007 9969.5166 10802.02605 12347.83117 10686.03521 1.028859943 1.099566646 1.09128487 1.048443331 0.951224387 0.904916259 0.932948133 1.010854432 1.155510994 1 13.38343906 -6.075961556 5.072475664 0.986105788 1.075220205 0.237739471 0.06570924 0.315347813 14.63825363 0.021121809 0.027980128 8.40E-07 6.075961556 0.089114416 AVAS(ph)PEATVSQTDENK ddPTM_A459_MK2206_30min_R2 4 AVASPEATVSQTDENK 16 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2;A0A087WYF6 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 AVAS(1)PEATVSQTDENK;AVAS(1)PEATVSQTDENK;AVAS(0.958)PEAT(0.042)VSQTDENK;AVAS(1)PEATVSQTDENK 273.39 9.10E-51 124705000 177827 168951 162487 159872 166442 117461 186461 143344 116414 171457 TRUE FALSE 191441.5718 160561.139 167904.2355 146809.9462 159906.6508 121931.0607 161978.4467 162079.553 126539.4793 165862.3721 1.154219425 0.968038362 1.012310588 0.885131114 0.96409239 0.735133949 0.976583445 0.977193024 0.762918543 1 17.33962711 -1.52287956 0.691161993 0.896928585 30.51587064 0.410602743 0.089207427 264.713094 1.455650359 0.034280701 12097.43843 0.029999944 1.52287956 29.61894205 AVAS(ph)SPAATNSEVK ddPTM_A459_MK2206_30min_R2 1 AVASSPAATNSEVK 14 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 AVAS(0.5)S(0.5)PAATNSEVK 193.45 0.0001157 4282900 25073 29105 26318 26452 25851 20224 30976 23375 19774 26398 TRUE FALSE 26992.60816 27659.68802 27195.42898 24290.78698 24835.95985 20993.63849 26908.81399 26430.19276 21493.90678 25536.63542 1.057015057 1.083137522 1.064957405 0.95121329 0.972561946 0.822098845 1.053733726 1.034991193 0.841689064 1 14.64028083 -5.752132563 7.741504449 0.954581238 1.070273519 0.35845625 0.070252943 0.152378307 56.54806496 0.019490426 0.032066657 1.77E-06 5.752132563 0.115692281 AVASS(ph)PAATNSEVK ddPTM_A459_MK2206_30min_R2 1 AVASSPAATNSEVK 14 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 AVAS(0.005)S(0.993)PAAT(0.001)NSEVK 164.22 0.00026222 5020500 30104 30199 25177 29531 28299 23819 30041 23228 23083 31592 TRUE FALSE 32408.78539 28699.36157 26016.38861 27118.22284 27187.83907 24725.44874 26096.58061 26263.97935 25090.71762 30561.15563 1.060456803 0.939079723 0.851289425 0.887342847 0.889620779 0.809048226 0.85391341 0.85939091 0.821000289 1 14.89941148 -4.823892765 2.105585509 0.864402886 1.104780885 0.569112557 0.05004197 0.404363548 2.198707923 0.012525436 0.181781507 1.50E-05 4.823892765 0.240377999 AVAVFYT(ph)MITSMLNPLIY(ph)T(ph)LRNAQMK ddPTM_A459_MK2206_30min_R2 1 AVAVFYTMITSMLNPLIYTLRNAQMK 26 1 Q8NGP0 Q8NGP0 OR4C13 Olfactory receptor 4C13 3 AVAVFY(0.466)T(0.507)MIT(0.088)S(0.088)MLNPLIY(0.92)T(0.932)LRNAQMK 47.392 0.017301 5694900 5577.8 10977 9674 19731 16872 11947 16068 13422 13133 12360 TRUE FALSE 6004.840657 10431.89814 9996.526332 18118.91418 16209.52051 12401.65146 13958.2523 15176.30148 14275.2846 11956.69421 0.502215792 0.872473441 0.836061051 1.515378236 1.355685796 1.037214069 1.167400625 1.26927236 1.193915672 1 13.54553095 -5.603858221 6.590696319 1.226278606 0.727374994 0.652791153 0.163124004 0.128290842 8.40160701 0.045426352 0.079398369 2.49E-06 5.603858221 -0.498903612 AVDITT(ph)PK ddPTM_A459_MK2206_30min_R1 1 AVDITTPK 8 0 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 AVDIT(0.024)T(0.976)PK 128.35 0.010177 128170000 20636 21144 20998 18216 13611 12444 14119 13915 16295 13774 TRUE FALSE 18880.79984 19767.52176 19572.71426 19618.99948 13068.84505 13148.56853 13177.14727 13793.34262 17988.92356 15480.42711 1.21965626 1.276936458 1.264352342 1.26734226 0.844217343 0.849367297 0.851213418 0.891018221 1.162043104 1 13.91815766 -6.254481313 24.83296929 0.919258852 1.259010792 0.750613913 0.091310002 245.3953552 875802.24 0.027982729 0.035318277 5.57E-07 6.254481313 0.33975194 AVDITT(ph)PK ddPTM_A459_MK2206_30min_R2 3 AVDITTPK 8 0 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 AVDIT(0.045)T(0.955)PK;AVDIT(0.282)T(0.718)PK;AVDIT(0.033)T(0.967)PK 131.11 0.0085415 225886000 2818980 2607360 2509330 2346020 2546860 1938460 2688350 2201810 1831620 2645210 TRUE FALSE 3034803.276 2477882.294 2592989.81 2154342.661 2446857.479 2012229.454 2335366.416 2489594.127 1990930.997 2558897.014 1.185981014 0.968339984 1.013323239 0.841902839 0.956215692 0.786365939 0.912645723 0.972916891 0.778042643 1 21.28709065 -1.522879248 0.788692611 0.891407476 68.22224855 0.551870474 0.076856479 330.6373657 1.209383652 0.026075166 39729.64579 0.029999965 1.522879248 67.33084108 AVDS(ph)SSEEIEVEVPVVDRR ddPTM_A459_MK2206_30min_R1 3 AVDSSSEEIEVEVPVVDRR 19 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 AVDS(0.509)S(0.195)S(0.296)EEIEVEVPVVDRR;AVDS(0.494)S(0.012)S(0.494)EEIEVEVPVVDRR;AVDS(0.974)S(0.024)S(0.001)EEIEVEVPVVDRR 216.9 2.42E-19 14355600 4720.96 4399.72 4227.5 4001.88 5234.9 4304.6 4860.07 4358.49 3773.48 3750.75 TRUE FALSE 4319.417561 4113.297428 3940.549078 4310.105491 5026.382848 4548.322732 4535.863598 4320.384181 4165.74675 4215.421227 1.024670449 0.975773762 0.93479367 1.0224614 1.192379736 1.078972299 1.076016691 1.024899755 0.988216011 1 12.04146108 -6.000158254 24.99962382 1.067099242 0.978228521 0.288104918 0.056983179 7.035320381 1111809.985 0.016948799 0.024850835 1.00E-06 6.000158254 -0.088870721 AVDS(ph)SSEEIEVEVPVVDRR ddPTM_A459_MK2206_30min_R2 1 AVDSSSEEIEVEVPVVDRR 19 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 AVDS(0.97)S(0.027)S(0.003)EEIEVEVPVVDRR 197.05 1.53E-15 1199700 1495.6 5504.6 2008.4 3140.6 1552.1 4836.8 1880.9 1939.7 4049.4 1645.1 TRUE FALSE 1610.104286 5231.249568 2075.359054 2884.002934 1491.156755 5020.867813 1633.935571 2193.22545 4401.609492 1591.420522 1.011740306 3.287157289 1.304092178 1.812219268 0.936997315 3.154959827 1.026715157 1.378155817 2.765836831 1 10.63609939 -10.6699533 4.837046255 0.999941138 1.850997612 0.081888731 0.856923712 0.000553293 9.76E-05 0.779602974 0.189067438 2.14E-11 10.6699533 0.851056474 AVDSSS(ph)EEIEVEVPVVDRR ddPTM_A459_MK2206_30min_R2 1 AVDSSSEEIEVEVPVVDRR 19 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 AVDS(0.298)S(0.298)S(0.404)EEIEVEVPVVDRR 155.88 2.45E-05 0 1280.2 1319.6 2032.1 1123.6 2420 808.4 2247.6 1112.9 827.49 2368.9 TRUE FALSE 1378.213096 1254.070583 2099.8492 1031.798286 2324.97864 839.1642285 1952.48742 1258.359851 899.4635844 2291.602987 0.60141879 0.547246006 0.916323295 0.450251763 1.014564326 0.36619093 0.852018186 0.549117739 0.392504107 1 11.16214141 AVEFSSGAKSPS(ph)K ddPTM_A459_MK2206_30min_R1 2 AVEFSSGAKSPSK 13 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 AVEFSSGAKS(0.108)PS(0.892)K;AVEFSSGAKS(0.003)PS(0.997)K 206.66 5.71E-05 48851000 5761.9 5885.5 6617.4 6056.8 4582.3 4148.2 4546.7 5065.2 4517.5 3717.8 TRUE FALSE 5271.820148 5502.35288 6168.229325 6523.295785 4399.777288 4383.067499 4243.397939 5020.91549 4987.110291 4178.389132 1.261687215 1.316859849 1.476221848 1.561198725 1.052984092 1.048984994 1.015558342 1.201639036 1.19354855 1 12.02873114 -6.275636949 24.98155737 1.090216356 1.402927473 0.713620558 0.098828114 470.3279309 827571.009 0.033370467 0.038012933 5.30E-07 6.275636949 0.312711117 AVEHINK ddPTM_A459_MK2206_30min_R2 1 AVEHINK 7 0 P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8Y6I8 P06733 ENO1 Alpha-enolase;Enolase 0 133.81 0.0043613 8286500 154290 53091 81250 64275 87822 83108 87788 662220 369110 118440 FALSE TRUE 166102.561 50454.57814 83958.83445 59023.52689 84373.66701 86270.73318 76261.33015 748774.4277 401214.5206 114575.3125 1.449723831 0.440361689 0.732782941 0.515150477 0.736403551 0.752960924 0.665600019 6.535216107 3.501753666 1 16.8059367 -7.727774076 24.98322089 4.013863798 0.732944687 0.518341931 1.278851619 114.2543754 84788.85003 0.558320223 0.322323028 1.87E-08 7.727774076 -3.280919111 AVFHEEEQR ddPTM_A459_MK2206_30min_R1 1 AVFHEEEQR 9 0 A0A2R8Y611;O14617-3;O14617-2;O14617;O14617-5;O14617-4 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 0 131.62 0.0050024 2590500 2795 3094.5 3010 2528.2 3107.6 2843.6 3367.5 3189.3 2607.2 2572 FALSE TRUE 2557.270573 2893.047488 2805.689586 2722.922402 2983.817712 3004.602175 3142.860219 3161.416286 2878.22777 2890.638778 0.884673171 1.000833279 0.970612312 0.941979476 1.032234721 1.039424987 1.087254569 1.093673935 0.995706483 1 11.49717262 -6.363038613 3.728174973 1.050632499 0.954521335 0.547062606 0.040557081 0.184213207 4.679656482 0.012936352 0.014902391 4.33E-07 6.363038613 -0.096111164 AVFPS(ph)IVGR ddPTM_A459_MK2206_30min_R1 2 AVFPSIVGR 9 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;A5A3E0;P63267-2;F8WCH0;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;P0CG38 P60709;P63261;P68133;P0CG38 ACTB;POTEE;POTEF;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;POTEI "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member I" 1 AVFPS(1)IVGR;AVFPS(1)IVGR 122.94 0.0057853 32096000 7237.6 8361.3 6983 5327.8 6851.1 7222.1 8264.4 5443.9 8270.8 8485.7 TRUE FALSE 6622.004114 7816.97785 6509.013416 5738.148079 6578.20618 7631.009061 7713.096955 5396.304556 9130.579257 9536.97258 0.694350755 0.819649819 0.682503107 0.601673962 0.689758319 0.800150047 0.80875738 0.565829933 0.957387597 1 13.21931565 -8.386276935 6.340206691 0.996285452 0.713448858 0.646414024 0.080239419 0.150508562 6.78273512 0.078995443 0.020476034 4.11E-09 8.386276935 -0.282836594 AVFPS(ph)IVGRPR ddPTM_A459_MK2206_30min_R1 2 AVFPSIVGRPR 11 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;A5A3E0;P63267-2;F8WCH0;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;P0CG38 P60709;P63261;P68133;P0CG38 ACTB;POTEE;POTEF;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;POTEI "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member I" 1 AVFPS(1)IVGRPR;AVFPS(1)IVGRPR 118.61 0.0028929 333840000 5861.9 6603.7 5385.8 5139 6345.2 5641 5657.7 5023 4936.7 3851.6 TRUE FALSE 5363.314623 6173.79793 5020.226902 5534.80667 6092.457248 5960.388545 5280.285156 4979.084441 5449.887631 4328.765286 1.238994094 1.426226076 1.159736454 1.278610944 1.407435341 1.376925786 1.219813228 1.15023202 1.258993563 1 12.07973986 -8.754603515 0.635545365 1.000079819 1.311613184 0.507680838 0.087201829 0.933444049 0.790677181 0.096856586 0.037308811 1.76E-09 8.754603515 0.311533365 AVFPS(ph)IVGRPR ddPTM_A459_MK2206_30min_R2 2 AVFPSIVGRPR 11 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;A5A3E0;P63267-2;F8WCH0;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;P0CG38 P60709;P63261;P68133;P0CG38 ACTB;POTEE;POTEF;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;POTEI "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member I" 1 AVFPS(1)IVGRPR;AVFPS(1)IVGRPR 131.79 0.001174 238180000 62612 76582 57476 86532 76496 73044 87819 65634 61571 57582 TRUE FALSE 67405.62286 72779.04924 59392.22115 79462.0588 73492.38268 75823.7406 76288.25981 74212.58916 66926.33429 55703.10406 1.210087373 1.306552848 1.066228214 1.42652838 1.319358839 1.361212124 1.369551322 1.332288216 1.201483031 1 15.7654701 -8.610289848 3.382091591 1.000186843 1.300181029 0.482555251 0.094326861 0.329308018 9.084264541 0.092796326 0.024511601 2.45E-09 8.610289848 0.299994185 AVFPSIVGR ddPTM_A459_MK2206_30min_R1 1 AVFPSIVGR 9 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;A5A3E0;P63267-2;F8WCH0;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;P0CG38 P60709;P63261;P68133;P0CG38 ACTB;POTEE;POTEF;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;POTEI "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member I" 0 134.81 0.038688 19624000 1916.8 1685.9 1228.5 1488.9 2416.1 1996.9 1824.7 1362.8 1302.5 2623.2 FALSE TRUE 1753.766094 1576.147604 1145.112843 1603.575336 2319.861621 2109.962752 1702.977592 1350.885183 1437.899536 2948.18182 0.594863615 0.534616825 0.388413237 0.543920095 0.786878748 0.715682709 0.577636556 0.45820959 0.487724172 1 11.52560979 -6.015410686 24.24183774 0.643669238 0.501719258 0.186446643 0.154381784 921.3665738 1449363.01 0.04595342 0.061396302 9.65E-07 6.015410686 -0.14194998 AVFPSIVGRPR ddPTM_A459_MK2206_30min_R1 2 AVFPSIVGRPR 11 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;A5A3E0;P63267-2;F8WCH0;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;P0CG38 P60709;P63261;P68133;P0CG38 ACTB;POTEE;POTEF;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;POTEI "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member I" 0 ; 215.72 5.84E-05 304810000 7193.6 7682.8 7524.5 7117.1 8634.4 7282.1 8010.3 7816.7 5815.4 5218.6 FALSE TRUE 6581.746545 7182.648324 7013.757904 7665.260275 8290.473564 7694.406209 7475.947503 7748.359416 6419.931641 5865.119566 1.122184547 1.224638005 1.195842271 1.306923105 1.413521663 1.311892472 1.27464537 1.321091468 1.094595186 1 12.5179448 -8.434779785 3.773077774 1.002255907 1.274235627 0.598258664 0.075137298 0.15470977 3.959814756 0.079099861 0.020852729 3.67E-09 8.434779785 0.271979721 AVFPSIVGRPR ddPTM_A459_MK2206_30min_R2 2 AVFPSIVGRPR 11 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;A5A3E0;P63267-2;F8WCH0;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;P0CG38 P60709;P63261;P68133;P0CG38 ACTB;POTEE;POTEF;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;POTEI "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;POTE ankyrin domain family member I" 0 ; 197.79 5.62E-05 91291000 83607 115648 100275 121757 125996 130899 113201 83732 118679 96512 FALSE TRUE 90008.0162 109905.0885 103618.1185 111809.0636 121048.764 135880.4532 98337.57272 94676.05989 129001.4849 93362.82134 0.964067012 1.177182597 1.109843479 1.197575887 1.296541409 1.455402174 1.053284073 1.014065969 1.381722221 1 16.51056054 -4.006038127 1.204449881 1.201860438 3.80E-12 0.17168262 0.145538746 15.21626286 4.782990362 0.044161409 35.93571526 9.86E-05 4.006038127 -1.201860438 AVFVDLEPT(ph)VIDEVR ddPTM_A459_MK2206_30min_R1 2 AVFVDLEPTVIDEVR 15 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;F8VQQ4;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;P68363;P68363-2 Q9BQE3;P68363 TUBA1C;TUBA1B;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain 1 AVFVDLEPT(1)VIDEVR;AVFVDLEPT(1)VIDEVR 195.6 4.60E-05 4148300 1530.17 1490.55 1648.36 1126.31 1524.56 1308.55 1740.36 1361.75 1173.63 1158.6 TRUE FALSE 1400.021006 1393.514924 1536.473916 1213.058591 1463.833547 1382.63897 1624.26376 1349.844363 1295.633038 1302.136115 1.075172549 1.070176081 1.179964136 0.931591235 1.124178594 1.061823687 1.247384003 1.03663845 0.99500584 1 10.34666455 -7.989454803 24.99253887 1.003609263 1.097236676 0.222670487 0.077532289 307.4342926 728631.1434 0.041879761 0.020089892 1.02E-08 7.989454803 0.093627413 AVFVDLEPTVIDEIR ddPTM_A459_MK2206_30min_R1 1 AVFVDLEPTVIDEIR 15 0 P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2 P68366-2 TUBA4A Tubulin alpha-4A chain 0 250.26 6.73E-27 6730800 1256.8 1502.8 1425.2 1267.1 1530.2 1535.9 1109.1 1295 1071.5 1130.6 FALSE TRUE 1149.90256 1404.967447 1328.461395 1364.692262 1469.248894 1622.861331 1035.113963 1283.677952 1182.886259 1270.667264 0.904959617 1.105692644 1.045483293 1.073996553 1.156281377 1.277172535 0.814622358 1.010239256 0.930917395 1 10.31137058 -7.275112296 24.99948558 0.939798039 1.09419146 0.364760653 0.100196112 937.7247904 1714523.379 0.042426963 0.028779785 5.31E-08 7.275112296 0.154393421 AVFVDLEPTVIDEVR ddPTM_A459_MK2206_30min_R1 5 AVFVDLEPTVIDEVR 15 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;F8VQQ4;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;P68363;P68363-2 Q9BQE3;P68363 TUBA1C;TUBA1B;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain 0 ;;;; 370.17 4.44E-212 161103500 11368.2 12591.3 12597.4 11544.6 12210.4 11272 12326.7 11891.4 9554.6 9977.3 FALSE TRUE 10401.27489 11771.60408 11742.32359 12433.76709 11724.03391 11910.2109 11504.40833 11787.43474 10547.83486 11213.36325 0.927578521 1.049783532 1.047172318 1.108834773 1.045541258 1.062144393 1.0259552 1.0511953 0.940648637 1 13.45293143 -10.35919914 6.186405534 0.999999998 1.034329076 0.016717868 0.052326465 1.52E-09 3.63E-10 0.050268772 0.012191967 4.37E-11 10.35919914 0.034329078 AVFVDLEPTVIDEVR ddPTM_A459_MK2206_30min_R2 4 AVFVDLEPTVIDEVR 15 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;F8VQQ4;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;P68363;P68363-2 Q9BQE3;P68363 TUBA1C;TUBA1B;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain 0 ;;; 234.24 3.19E-13 27066900 62782.2 75443.2 65763 80283 73417 76215 78608.9 59512.1 68484.3 70936 FALSE TRUE 67588.8535 71696.80039 67955.5056 73723.62209 70534.27969 79115.41523 68287.457 67290.53581 74440.94062 68621.36413 0.984953511 1.044817475 0.990296629 1.074353782 1.027876385 1.15292688 0.995134065 0.98060621 1.084807065 1 16.06637019 -3.22653396 0.975597033 1.042579112 6.58E-13 0.087491303 0.050852425 94.09652998 5.766319144 0.016385341 193.1468468 0.000593562 3.22653396 -1.042579112 AVFVDLEPTVIDEVRT(ph)GTYR ddPTM_A459_MK2206_30min_R1 2 AVFVDLEPTVIDEVRTGTYR 20 1 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;F8VQQ4;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;P68363;P68363-2 Q9BQE3;P68363 TUBA1C;TUBA1B;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain 1 AVFVDLEPT(0.001)VIDEVRT(0.869)GT(0.129)Y(0.001)R;AVFVDLEPTVIDEVRT(0.788)GT(0.211)Y(0.001)R 128.38 0.00026443 4582300 1209.77 1219.34 1330.04 1429.78 1714.15 1260.58 1020.38 1156.95 765.53 593.7 TRUE FALSE 1106.872709 1139.960744 1239.760591 1539.901903 1645.871776 1331.95295 952.312312 1146.834908 845.109583 667.2520382 1.658852496 1.708441007 1.858009447 2.307826451 2.466641811 1.996176668 1.427215291 1.718743207 1.266552269 1 9.382087997 -8.048336936 1.022598405 1.039177362 1.995598188 0.598937329 0.269251016 0.403008081 0.794078487 0.283390646 0.10233137 8.95E-09 8.048336936 0.956420826 AVGMPS(ph)PVSPK ddPTM_A459_MK2206_30min_R1 2 AVGMPSPVSPK 11 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 AVGMPS(0.812)PVS(0.188)PK;AVGMPS(0.989)PVS(0.011)PK 115.14 0.0062647 18200500 9937.8 10546 10434.9 9435 10925.1 9560.5 10961.9 9591.8 9301 8807.7 TRUE FALSE 9092.537925 9859.453483 9726.608061 10161.68533 10489.93013 10101.80725 10230.65165 9507.939904 10267.87223 9898.864371 0.91854354 0.996018646 0.982598377 1.026550618 1.059710462 1.020501632 1.033517712 0.96050815 1.037277798 1 13.27304731 -3.964601272 1.061572972 1.018401802 0.532259412 0.550000655 0.026489316 6.601876163 1.703703082 0.008475574 5.492875571 0.000108492 3.964601272 -0.486142391 AVGMPS(ph)PVSPK ddPTM_A459_MK2206_30min_R2 3 AVGMPSPVSPK 11 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 AVGMPS(0.999)PVS(0.001)PK;AVGMPS(0.989)PVS(0.011)PK;AVGMPS(0.997)PVS(0.003)PK 114.24 0.0066371 17404900 199542 229738 211029 235966 229222 199125 245266 195668 196329 239919 TRUE FALSE 214819.0889 218329.545 218064.6015 216686.823 220221.5925 206702.8414 213062.2796 221242.4794 213405.3415 232090.4627 0.92558344 0.940708819 0.939567266 0.93363088 0.948861017 0.890613251 0.918013938 0.953259677 0.919492077 1 17.82432771 -10.7906086 3.198756585 1.000315598 0.930407233 0.599886486 0.017154479 7768625.809 10588411.84 23738.02505 0.004398478 1.62E-11 10.7906086 -0.069908365 AVGMPSPVS(ph)PK ddPTM_A459_MK2206_30min_R1 2 AVGMPSPVSPK 11 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 AVGMPS(0.201)PVS(0.799)PK;AVGMPS(0.435)PVS(0.565)PK 128.54 0.0027565 93113000 18466.8 21312.7 23673 18788.5 15211.3 13398 17299.7 15660.6 19005.7 16895.9 TRUE FALSE 16896.10169 19925.23936 22066.14272 20235.59353 14605.40171 14156.58318 16145.66858 15523.68103 20981.41053 18989.09165 0.889779353 1.049299236 1.162043089 1.065643049 0.769146939 0.745511341 0.850260185 0.817505193 1.104919125 1 14.21288327 -6.24518219 24.34906076 0.863765254 1.050831202 0.297976714 0.11853338 668.4672671 1001190.011 0.035924962 0.046220583 5.69E-07 6.24518219 0.187065949 AVGMPSPVS(ph)PK ddPTM_A459_MK2206_30min_R2 4 AVGMPSPVSPK 11 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 AVGMPS(0.008)PVS(0.992)PK;AVGMPS(0.068)PVS(0.932)PK;AVGMPS(0.025)PVS(0.975)PK;AVGMPS(0.028)PVS(0.972)PK 139.48 0.0011653 84991000 453764 442504 471218 371762 425039 306825 493520 390235 312675 455062 TRUE FALSE 488504.5207 420529.8948 486928.1729 341387.8554 408349.8332 318501.4404 428720.2312 441240.0544 339870.9063 440213.3642 1.109699433 0.955286525 1.106118561 0.775505432 0.927617983 0.723516064 0.973891903 1.002332256 0.772059492 1 18.74784342 -5.75139221 24.99983603 0.881338645 1.04686002 0.382217536 0.101648686 223.4299229 555943.4785 0.026881483 0.045873852 1.77E-06 5.75139221 0.165521375 AVGNGAAEISLKS(ph)PR ddPTM_A459_MK2206_30min_R2 2 AVGNGAAEISLKSPR 15 1 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 AVGNGAAEISLKS(1)PR;AVGNGAAEIS(0.001)LKS(0.999)PR 96.153 0.0056961 14095100 72434 73719 71851 83436 75484 57796 78411 61671 61395 71503 TRUE FALSE 77979.60273 70058.22166 74246.47648 76619.0119 72520.11888 59995.46728 68115.54151 69731.61145 66735.02612 69169.86297 1.127363846 1.012843147 1.07339343 1.107693562 1.048435197 0.867364264 0.984757503 1.00812129 0.964799166 1 16.07785598 -6.542355146 24.98881939 0.965766906 1.075390467 0.59510047 0.04546574 173.1227617 222120.3252 0.014935139 0.014936841 2.87E-07 6.542355146 0.109623561 AVGS(ph)PATATPDLVSMATTQGVR ddPTM_A459_MK2206_30min_R1 1 AVGSPATATPDLVSMATTQGVR 22 0 Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;Q96L91-4 Q96L91-3 EP400 E1A-binding protein p400 1 AVGS(0.908)PAT(0.087)AT(0.005)PDLVSMATTQGVR 65.097 0.045345 0 364.69 428.13 339.7 396.95 351.44 389.93 308.16 619.54 330.73 253.85 TRUE FALSE 333.6712004 400.2586592 316.6421105 427.5231578 337.4414006 412.0074996 287.6032087 614.1234271 365.110567 285.2988545 1.169549738 1.402945203 1.109861135 1.4985099 1.182764653 1.444126021 1.008076984 2.15256184 1.27974775 1 8.156330144 AVGS(ph)PLCVPAR ddPTM_A459_MK2206_30min_R1 2 AVGSPLCVPAR 11 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 AVGS(1)PLCVPAR;AVGS(1)PLCVPAR 119.74 0.0049314 34544000 5729.1 4920.6 5043.9 4578.7 5670.3 4495.4 4957 4396.5 4228.2 4132.3 TRUE FALSE 5241.80996 4600.268046 4701.534121 4931.352267 5444.439944 4749.925663 4626.327575 4358.061864 4667.736521 4644.240521 1.128668926 0.990531826 1.012336484 1.061821033 1.172299307 1.022756173 0.996142976 0.93837988 1.005059169 1 12.18122697 -7.11311559 3.860597986 0.980148133 1.066785266 0.37936506 0.05219975 0.278046381 7.301263071 0.021878139 0.01678076 7.71E-08 7.11311559 0.086637133 AVGS(ph)PLCVPAR ddPTM_A459_MK2206_30min_R2 1 AVGSPLCVPAR 11 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 AVGS(1)PLCVPAR 126.66 0.0031164 8907400 27908 27091 24297 28794 32926 32992 23338 20723 21368 27234 TRUE FALSE 30044.65794 25745.70033 25107.04985 26441.43809 31633.1598 34247.53368 20273.69257 23431.56725 23226.55002 26345.35681 1.140415678 0.977238628 0.952997146 1.003646991 1.200711003 1.299945714 0.769535699 0.889400262 0.881618351 1 14.6852611 -7.281599359 24.99209157 0.875921938 1.084520896 0.456918037 0.111941213 855.8094485 1060932.62 0.05088285 0.034354104 5.23E-08 7.281599359 0.208598958 AVHS(ph)PIR ddPTM_A459_MK2206_30min_R2 1 AVHSPIR 7 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 AVHS(1)PIR 74.165 0.037437 15709000 27162 31761 29651 33095 29410 30116 27953 31804 30623 28235 TRUE FALSE 29241.5436 30183.79492 30639.54954 30391.03263 28255.21563 31262.08548 24282.73752 35960.892 33286.53319 27313.69426 1.070581787 1.105079182 1.121765121 1.112666501 1.034470671 1.144557202 0.889031608 1.316588362 1.218675616 1 14.73733684 -7.783376587 24.99856008 1.200723861 1.075115088 0.191792586 0.099821347 339.0809987 386394.3742 0.05138871 0.024718778 1.65E-08 7.783376587 -0.125608773 AVIVSS(ph)PK ddPTM_A459_MK2206_30min_R1 2 AVIVSSPK 8 0 Q14966-3;Q14966;Q14966-5 Q14966-3 ZNF638 Zinc finger protein 638 1 AVIVS(0.035)S(0.965)PK;AVIVS(0.028)S(0.972)PK 117.01 0.0090683 19989500 18432.6 22315 19533.9 20993 12609.8 12254.7 12868.6 12977.2 16094.9 12028 TRUE FALSE 16864.81058 20862.28944 18207.99329 22609.8845 12107.52496 12948.55052 12010.15917 12863.74171 17768.02245 13518.11945 1.247570762 1.543283408 1.346932416 1.672561379 0.895651574 0.957866261 0.888448961 0.951592547 1.314385667 1 13.72260685 -6.271168362 24.98813463 0.991087127 1.451518555 0.673406662 0.153857444 386.2456262 992039.8732 0.046690157 0.053595992 5.36E-07 6.271168362 0.460431428 AVIVSS(ph)PK ddPTM_A459_MK2206_30min_R2 4 AVIVSSPK 8 0 Q14966-3;Q14966;Q14966-5 Q14966-3 ZNF638 Zinc finger protein 638 1 AVIVS(0.023)S(0.977)PK;AVIVS(0.045)S(0.955)PK;AVIVS(0.255)S(0.745)PK;AVIVS(0.275)S(0.725)PK 135.71 0.0026405 397743000 1126540 1113610 1026520 917100 873730 648720 1226460 868540 649600 1010110 TRUE FALSE 1212788.769 1058309.747 1060743.664 842169.9963 839422.9701 673407.4942 1065424.329 982061.1601 706101.0338 977150.1934 1.241148778 1.083057399 1.085548232 0.861863409 0.859052145 0.689154542 1.090338349 1.005025805 0.722612592 1 19.8982208 -5.531109038 2.07261055 0.888026626 1.174138386 0.462683483 0.122647411 0.310606258 2.622381627 0.036677652 0.092411712 2.94E-06 5.531109038 0.28611176 AVLFCLS(ph)EDKK ddPTM_A459_MK2206_30min_R2 1 AVLFCLSEDKK 11 1 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;E9PLJ3;E9PS23 P23528 CFL1 Cofilin-1 1 AVLFCLS(1)EDKK 84.365 0.018679 5390500 14768 14454 14891 10692 9630.9 7850.1 15795 16087 14576 12304 TRUE FALSE 15898.64943 13736.23538 15387.45851 9818.429398 9252.742475 8148.841056 13721.09753 18189.62613 15843.79413 11902.52149 1.335737932 1.15406096 1.292789811 0.824903312 0.777376666 0.684631493 1.152789141 1.528216198 1.331129219 1 13.53897961 -9.391648704 12.3059776 0.999999794 1.107637405 0.016621575 0.261779473 0 0 0.286522617 0.069491942 4.06E-10 9.391648704 0.107637611 AVLFCLSEDKK ddPTM_A459_MK2206_30min_R1 1 AVLFCLSEDKK 11 1 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;E9PLJ3;E9PS23 P23528 CFL1 Cofilin-1 0 141.88 0.0013092 41707000 2799.9 2463.6 2881.3 3260.6 2547.7 2528.9 2515.4 2753.7 1994.8 2125.6 FALSE TRUE 2561.753802 2303.219192 2685.725384 3511.731977 2446.219714 2672.084133 2347.602256 2729.624691 2202.166598 2388.935375 1.072341189 0.964119505 1.12423526 1.469998734 1.023979024 1.11852508 0.9826981 1.142611357 0.921819243 1 11.22215211 -6.925708873 2.104248038 1.025133935 1.142347513 0.14561374 0.13614129 0.742634699 6.682561812 0.060899425 0.050112411 1.19E-07 6.925708873 0.117213579 AVLFCLSEDKK ddPTM_A459_MK2206_30min_R2 2 AVLFCLSEDKK 11 1 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;E9PLJ3;E9PS23 P23528 CFL1 Cofilin-1 0 ; 120.63 0.0063249 14555000 47193 59292 51423 53796 56787 49894 65515 39611 44982 56749 FALSE TRUE 50806.13237 56347.6455 53137.41715 49400.69472 54557.25705 51792.75113 56912.8018 44788.2937 48894.45305 54897.28478 0.925476234 1.026419535 0.967942538 0.89987501 0.99380611 0.943448321 1.03671433 0.815856265 0.890653395 1 15.74444717 -7.758346153 24.99989941 0.889941132 0.969712983 0.218805228 0.057805316 99.67360941 805596.7317 0.027176017 0.014830007 1.74E-08 7.758346153 0.079771851 AVLS(ph)PGSVFSPGR ddPTM_A459_MK2206_30min_R2 1 AVLSPGSVFSPGR 13 0 P27987-2;P27987 P27987-2 ITPKB Inositol-trisphosphate 3-kinase B 1 AVLS(0.622)PGS(0.376)VFS(0.003)PGR 79.466 0.039028 4555300 17861 23606 19698 25169 18343 20612 20017 16687 21624 16716 TRUE FALSE 19228.45189 22433.76037 20354.72149 23112.61219 17622.76165 21396.4041 17388.74386 18868.0482 23504.81643 16170.55829 1.189102537 1.387321326 1.258751932 1.429302055 1.089805394 1.323170401 1.07533355 1.16681489 1.453556273 1 13.98108187 -6.263549987 24.9885767 1.194568022 1.317107626 0.180976032 0.135919375 346.0617965 4097191.539 0.039600156 0.04717164 5.45E-07 6.263549987 0.122539603 AVLSDS(ph)PQLSEGK ddPTM_A459_MK2206_30min_R1 4 AVLSDSPQLSEGK 13 0 Q7Z4H7;Q5VY60;Q7Z4H7-3;Q5SYF9;Q7Z4H7-2 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 AVLS(0.009)DS(0.991)PQLSEGK;AVLSDS(1)PQLSEGK;AVLS(0.018)DS(0.977)PQLS(0.004)EGK;AVLS(0.002)DS(0.92)PQLS(0.078)EGK 251.68 5.13E-23 87616400 20436.9 18738.8 20007.8 17726.4 18189.2 15809.4 19011.7 19441.2 17187.9 14749.3 TRUE FALSE 18698.63434 17518.90071 18649.72628 19091.6904 17464.68565 16704.51457 17743.46418 19271.22764 18974.64371 16576.55464 1.128016934 1.056848127 1.125066498 1.1517285 1.05357754 1.007719332 1.07039518 1.162559293 1.144667522 1 14.01685656 -3.369897723 8.177406774 1.092489756 1.096693302 0 0.056989428 0 0 0.013463943 0 0.00042668 3.369897723 0.004203546 AVLSDS(ph)PQLSEGK ddPTM_A459_MK2206_30min_R2 4 AVLSDSPQLSEGK 13 0 Q7Z4H7;Q5VY60;Q7Z4H7-3;Q5SYF9;Q7Z4H7-2 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 AVLS(0.004)DS(0.988)PQLS(0.008)EGK;AVLSDS(0.997)PQLS(0.002)EGK;AVLS(0.016)DS(0.984)PQLSEGK;AVLS(0.002)DS(0.952)PQLS(0.046)EGK 214.89 1.35E-06 105667000 358769 366770 343393 406120 400771 342461 435368 312199 319391 356554 TRUE FALSE 386236.6305 348556.7351 354841.5512 372938.6969 385034.7168 355493.5933 378203.6586 353004.4812 347171.0519 344919.6722 1.11978719 1.010544667 1.028765767 1.081233478 1.116302571 1.030656185 1.096497791 1.023439687 1.006527258 1 18.39590089 -7.935075338 6.136360498 1.006865784 1.066019083 0.378028825 0.035147736 0.222770939 15.49800865 0.019979589 0.009374181 1.16E-08 7.935075338 0.059153299 AVLVDLEPGT(ph)MDSVR ddPTM_A459_MK2206_30min_R1 1 AVLVDLEPGTMDSVR 15 0 P04350;M0QY85;M0QZL7;M0R278;M0R0X0;M0QY37;M0QX14;A0A075B724;P68371;Q3ZCM7 P04350;P68371;Q3ZCM7 TUBB4A;TUBB8;TUBB4B Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain 1 AVLVDLEPGT(0.964)MDS(0.036)VR 125.36 0.0026829 0 632.3 611.9 825.99 708.68 881.36 841.28 790.1 623.55 648.97 426.46 TRUE FALSE 578.5195647 572.0651988 769.9241001 763.2626564 846.2535649 888.9125466 737.3938706 618.0983681 716.4327539 479.2930844 1.207026731 1.193560302 1.606374315 1.592475838 1.765628573 1.854632532 1.538503047 1.289604186 1.494769645 1 8.904764314 -8.964050365 1.020193894 1.002258964 1.533776428 0.343480583 0.209852534 1.968591917 3.185452664 0.229832267 0.072769213 1.09E-09 8.964050365 0.531517464 AVLVDLEPGTMDS(ph)VR ddPTM_A459_MK2206_30min_R1 1 AVLVDLEPGTMDSVR 15 0 P04350;M0QY85;M0QZL7;M0R278;M0R0X0;M0QY37;M0QX14;A0A075B724;P68371;Q3ZCM7 P04350;P68371;Q3ZCM7 TUBB4A;TUBB8;TUBB4B Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain 1 AVLVDLEPGT(0.002)MDS(0.998)VR 137.73 0.00040048 2411800 630.86 569.67 658.44 548.24 595.65 810.62 724.85 567.46 412.35 478.26 TRUE FALSE 577.2020442 532.5843795 613.7469273 590.4655398 571.9239992 856.5166039 676.4965791 562.498757 455.2152581 537.5104595 1.073843372 0.990835378 1.141832529 1.098519163 1.064023944 1.593488255 1.258573795 1.046488951 0.846895628 1 9.070149018 -7.994002279 5.407572406 0.928066344 1.174466956 0.284693217 0.160457506 0.230882597 22.05751831 0.108019971 0.046193478 1.01E-08 7.994002279 0.246400612 AVLVDLEPGTMDSVR ddPTM_A459_MK2206_30min_R1 1 AVLVDLEPGTMDSVR 15 0 P04350;M0QY85;M0QZL7;M0R278;M0R0X0;M0QY37;M0QX14;A0A075B724;P68371;Q3ZCM7 P04350;P68371;Q3ZCM7 TUBB4A;TUBB8;TUBB4B Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain 0 119.39 0.026511 6736100 1655.6 1785.3 1710.1 1800.4 1686.5 1471.1 1519 1484.8 1625 1532.7 FALSE TRUE 1514.782526 1669.076646 1594.023177 1939.06712 1619.323134 1554.392411 1417.670282 1471.81855 1793.924565 1722.582447 0.879367213 0.968938612 0.925368292 1.125674491 0.940055517 0.902361691 0.82299125 0.854425605 1.041415793 1 10.75035732 -6.518357458 24.56906941 0.91018982 0.978630161 0.062339866 0.083944364 348.17084 1892007.148 0.027793427 0.02850406 3.03E-07 6.518357458 0.068440342 AVNTQALS(ph)GAGILR ddPTM_A459_MK2206_30min_R2 1 AVNTQALSGAGILR 14 0 O60749;O60749-2 O60749 SNX2 Sorting nexin-2 1 AVNTQALS(1)GAGILR 125.39 0.0013835 4479100 15895 16994 15707 17882 14586 16287 13930 10381 13589 14208 TRUE FALSE 17111.93342 16150.10267 16230.66354 16420.9834 14013.28035 16906.8132 12100.97427 11737.83234 14770.94666 13744.39412 1.24501184 1.175031982 1.180893344 1.194740434 1.019563338 1.230087921 0.880429807 0.854008713 1.074688817 1 13.74655569 -7.261734172 24.99995296 0.940115888 1.168464352 0.64232075 0.080863719 16.82907536 1427106.612 0.032177026 0.023236261 5.47E-08 7.261734172 0.228348463 AVPALGKS(ph)PPHHSGFQQYQQADASK ddPTM_A459_MK2206_30min_R2 2 AVPALGKSPPHHSGFQQYQQADASK 25 1 B1ALB4;E9PD50;Q92540-2;Q92540;Q92540-5;Q92540-4 B1ALB4 SMG7 Protein SMG7 1 AVPALGKS(0.757)PPHHS(0.234)GFQQY(0.009)QQADASK;AVPALGKS(0.882)PPHHS(0.116)GFQQY(0.001)QQADASK 53.381 0.0076254 10091200 23837.9 62171 38795 83932 102427 118804 82221 58957 91206 48095 TRUE FALSE 25662.94795 59083.67855 40088.40594 77074.48711 98405.20133 123325.1695 71425.28393 66662.88233 99138.93302 46525.66409 0.551586924 1.269915856 0.861640704 1.656601547 2.115073546 2.650691224 1.535180321 1.432819577 2.130844018 1 15.50573912 -5.84271447 4.232530518 1.862149724 0.928367538 0.447468805 0.454365069 0.195967423 6.576814712 0.131312069 0.204991636 1.44E-06 5.84271447 -0.933782186 AVPAPSPGPTHNS(ph)PELGRPPAAGVLAPDMSDKDK ddPTM_A459_MK2206_30min_R2 1 AVPAPSPGPTHNSPELGRPPAAGVLAPDMSDKDK 34 2 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 AVPAPS(0.009)PGPT(0.119)HNS(0.871)PELGRPPAAGVLAPDMS(0.001)DKDK 45.983 0.0073717 4813100 29447 30420 24297 27058 28122 18808 24035 23054 21987 32503 TRUE FALSE 31701.48496 28909.38703 25107.04985 24847.27485 27017.78898 19523.75162 20879.17563 26067.23696 23899.38952 31442.42977 1.008239032 0.919438709 0.798508577 0.790246652 0.859278026 0.620936479 0.664044598 0.829046519 0.760099957 1 14.94042509 -4.936480722 1.230272289 0.768818777 1.083984974 0.335128527 0.099191146 1.207212586 1.911775452 0.030223486 0.453364396 1.16E-05 4.936480722 0.315166197 AVPETEDVQASVSDTAQQPSEEQSKS(ph)LEKPK ddPTM_A459_MK2206_30min_R2 1 AVPETEDVQASVSDTAQQPSEEQSKSLEKPK 31 2 H0YME2;H0YK21;H0YK54;Q6FIF0-2;Q6FIF0 H0YME2 ZFAND6 AN1-type zinc finger protein 6 1 AVPETEDVQAS(0.009)VS(0.021)DT(0.021)AQQPS(0.22)EEQS(0.271)KS(0.459)LEKPK 50.47 0.0056804 8813800 38285 39374 34351 30097 38086 21733 34545 29249 29470 41092 TRUE FALSE 41216.12904 37418.74442 35496.2452 27637.97882 36590.55227 22560.06454 30009.2 33071.94473 32033.24733 39751.17141 1.036853194 0.941324321 0.892960986 0.695274576 0.920489912 0.567532069 0.754926181 0.831974092 0.80584411 1 15.27870975 -5.286005366 1.828523166 0.783478803 1.024063188 0.312413092 0.113493039 0.452992865 2.676871169 0.031585593 0.130332012 5.18E-06 5.286005366 0.240584385 AVPIAVADEGES(ph)ESEDDDLKPR ddPTM_A459_MK2206_30min_R2 1 AVPIAVADEGESESEDDDLKPR 22 1 Q9Y2K6 Q9Y2K6 USP20 Ubiquitin carboxyl-terminal hydrolase 20 1 AVPIAVADEGES(0.809)ES(0.191)EDDDLKPR 89.043 0.00025718 3024400 8718.4 9472.3 8114.9 13054 9124.6 7647.6 10598 7715.9 8675.9 11466 TRUE FALSE 9385.887407 9001.919356 8385.446716 11987.44644 8766.322357 7938.634777 9206.46987 8724.394623 9430.5141 11091.86536 0.846195577 0.811578492 0.755999685 1.080742152 0.79033797 0.715716836 0.830019981 0.786557927 0.850218948 1 13.43721439 -8.565147835 19.26458301 1.000000003 0.827269302 0.237303692 0.092414884 1409.703341 642488.4798 0.091116394 0.023526152 2.72E-09 8.565147835 -0.172730701 AVPLNAS(ph)K ddPTM_A459_MK2206_30min_R1 1 AVPLNASK 8 0 Q9P0L0;Q9P0L0-2 Q9P0L0 VAPA Vesicle-associated membrane protein-associated protein A 1 AVPLNAS(1)K 79.974 0.030121 0 3385.1 1641.4 2091.5 1419.3 5223.5 5025.2 4527.3 3151.6 1622.9 1563.2 TRUE FALSE 3097.179469 1534.544562 1949.534807 1528.614732 5015.436934 5309.722481 4225.292078 3124.045893 1791.606263 1756.861018 1.762905226 0.873458143 1.109669341 0.870082902 2.854771598 3.022278045 2.405023525 1.778197514 1.019776889 1 10.77878435 -6.243321056 24.81142166 2.12228213 1.130819545 0.271686248 0.674841029 947.8989365 1298062.267 0.210095131 0.270676135 5.71E-07 6.243321056 -0.991462584 AVPMAPAPAS(ph)PGSSNDSSAR ddPTM_A459_MK2206_30min_R1 10 AVPMAPAPASPGSSNDSSAR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 AVPMAPAPAS(0.934)PGS(0.051)S(0.014)NDSS(0.001)AR;AVPMAPAPAS(0.937)PGS(0.049)S(0.013)NDSS(0.001)AR;AVPMAPAPAS(0.981)PGS(0.015)S(0.004)NDSSAR;AVPMAPAPAS(0.984)PGS(0.011)S(0.005)NDSSAR;AVPMAPAPAS(0.995)PGS(0.005)SNDSSAR;AVPMAPAPAS(1)PGSSNDSSAR;AVPMAPAPAS(0.981)PGS(0.014)S(0.004)NDSSAR;AVPMAPAPAS(0.859)PGS(0.108)S(0.033)NDSSAR;AVPMAPAPAS(0.928)PGS(0.048)S(0.012)NDS(0.006)S(0.006)AR;AVPMAPAPAS(0.744)PGS(0.225)S(0.029)NDS(0.001)SAR 297.7 2.18E-100 298564600 21878.6 21903.8 21490 17326 22173.8 19387.3 22500.8 19435.1 19044.4 17978.9 TRUE FALSE 20017.71018 20477.85864 20031.31867 18660.45152 21290.57059 20484.99217 20999.81269 19265.18097 21024.13353 20206.26187 0.990668651 1.013441218 0.99134213 0.92349845 1.053662015 1.013794254 1.03927252 0.953426274 1.040476149 1 14.30251483 -6.288643269 24.99836443 1.015419327 0.982973873 0.222194217 0.033671477 1324.076429 1216723.945 0.01050066 0.011908948 5.14E-07 6.288643269 -0.032445454 AVPMAPAPAS(ph)PGSSNDSSAR ddPTM_A459_MK2206_30min_R2 9 AVPMAPAPASPGSSNDSSAR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 AVPMAPAPAS(0.913)PGS(0.081)S(0.003)NDS(0.001)S(0.002)AR;AVPMAPAPAS(0.43)PGS(0.43)S(0.132)NDS(0.002)S(0.005)AR;AVPMAPAPAS(0.939)PGS(0.042)S(0.013)NDS(0.004)S(0.001)AR;AVPMAPAPAS(0.717)PGS(0.213)S(0.063)NDS(0.002)S(0.006)AR;AVPMAPAPAS(0.839)PGS(0.107)S(0.038)NDS(0.008)S(0.008)AR;AVPMAPAPAS(0.591)PGS(0.3)S(0.097)NDS(0.006)S(0.006)AR;AVPMAPAPAS(0.598)PGS(0.293)S(0.093)NDS(0.01)S(0.006)AR;AVPMAPAPAS(0.853)PGS(0.112)S(0.034)NDSSAR;AVPMAPAPAS(0.704)PGS(0.22)S(0.069)NDS(0.007)SAR 227.09 9.24E-24 437988200 629713.4 767982.5 675947.9 771572.7 773214.2 751948.5 777688.5 669550.9 694023.4 722233.1 TRUE FALSE 677924.7421 729845.6058 698483.6656 708532.7423 742853.9254 780564.4271 675577.0658 757063.5015 754388.3008 698666.6931 0.970312094 1.044626305 0.999738033 1.014121253 1.063245082 1.117220035 0.966951871 1.083583215 1.079754207 1 19.41424484 -6.212707365 6.271746715 1.054984402 1.008984765 0.198398707 0.043607175 0.367991764 35.77746949 0.012731444 0.01636974 6.13E-07 6.212707365 -0.045999638 AVPMAPAPASPGS(ph)SNDSSAR ddPTM_A459_MK2206_30min_R1 1 AVPMAPAPASPGSSNDSSAR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 AVPMAPAPAS(0.194)PGS(0.614)S(0.185)NDS(0.005)S(0.002)AR 112.91 0.0011986 6299300 1885.4 2146.4 2020.8 1543.1 2192.6 1802.8 2100.9 2073.5 1700.7 1718.9 TRUE FALSE 1725.036829 2006.66897 1883.633726 1661.949829 2105.264099 1904.872978 1960.752794 2055.371608 1877.493851 1931.850309 0.892945391 1.038729016 0.975041243 0.860289134 1.089765646 0.986035496 1.014961038 1.063939374 0.971863007 1 10.91576759 -6.273212705 24.99571799 1.022231474 0.951056038 0.325517977 0.055291924 980.6103207 2081911.204 0.016868019 0.019271521 5.33E-07 6.273212705 -0.071175436 AVPMAPAPASPGS(ph)SNDSSAR ddPTM_A459_MK2206_30min_R2 1 AVPMAPAPASPGSSNDSSAR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 AVPMAPAPAS(0.268)PGS(0.538)S(0.171)NDS(0.017)S(0.006)AR 134.4 0.00046149 11860000 67290 72366 66571 72346 65893 63977 69985 59499 59149 72617 TRUE FALSE 72441.77414 68772.40967 68790.44391 66435.10038 63305.70973 66411.68957 60795.88543 67275.72359 64293.6731 70247.51324 1.031236136 0.979001341 0.979258065 0.945728857 0.901180794 0.945395595 0.865452493 0.957695447 0.915244827 1 16.10015953 -5.279632855 1.085928892 0.92596593 1.033078358 0.432922411 0.034993391 0.759689979 1.257624978 0.01125797 0.077327718 5.25E-06 5.279632855 0.107112428 AVPMAPAPASPGSS(ph)NDSSAR ddPTM_A459_MK2206_30min_R1 1 AVPMAPAPASPGSSNDSSAR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 AVPMAPAPAS(0.173)PGS(0.326)S(0.451)NDS(0.048)S(0.003)AR 120.08 0.00095574 10511000 424.63 768.77 536.76 679.61 640.23 522.79 664.35 652.39 555.47 542.09 TRUE FALSE 388.5129887 718.7229333 500.3262267 731.95368 614.7282834 552.389918 620.0324237 646.686223 613.2130943 609.2482018 0.637692467 1.179688231 0.821219045 1.201404744 1.008994826 0.906674679 1.017700868 1.061449539 1.006507844 1 9.250886278 -4.745923404 24.99733395 1.019636336 0.637691422 0.540706007 0.106399929 661.821271 1066182.474 0.024755073 0.602148469 1.80E-05 4.745923404 -0.381944913 AVPPVS(ph)PELR ddPTM_A459_MK2206_30min_R1 4 AVPPVSPELR 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 AVPPVS(1)PELR;AVPPVS(1)PELR;AVPPVS(1)PELR;AVPPVS(1)PELR 123.01 0.0042874 353840000 28598.3 25724.3 24580 21665.8 30074.6 26919.2 26658.1 23607.2 20251.6 18400.2 TRUE FALSE 26165.86441 24049.64339 22911.57808 23334.50367 28876.665 28443.34184 24879.78679 23400.80474 22356.82629 20679.75569 1.265288855 1.162955876 1.107923054 1.128374243 1.396373605 1.375419626 1.203098681 1.131580329 1.081097215 1 14.33593152 -8.12554683 1.749902212 1.018177751 1.234029384 0.436240964 0.090481406 0.405841168 2.218512852 0.09412949 0.029326403 7.49E-09 8.12554683 0.215851633 AVPPVS(ph)PELR ddPTM_A459_MK2206_30min_R2 5 AVPPVSPELR 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 AVPPVS(1)PELR;AVPPVS(1)PELR;AVPPVS(1)PELR;AVPPVS(1)PELR;AVPPVS(1)PELR 136.81 0.0018153 304419300 338250 428816 369330 478146 424753 485663 401947 339243 414483 369744 TRUE FALSE 364146.6801 407521.621 381643.2779 439079.9423 408075.063 504145.2458 349170.8761 383583.2249 450533.9821 357679.2836 1.018081552 1.139349243 1.066998553 1.227580021 1.140896557 1.409489643 0.976212188 1.072422258 1.259603233 1 18.44830704 -3.902667687 1.109933828 1.15507193 0.366037732 0.083440701 0.122972424 25.61197325 6.1067165 0.037224768 37.67227682 0.000125122 3.902667687 -0.789034198 AVPS(ph)PPPPPIVK ddPTM_A459_MK2206_30min_R2 4 AVPSPPPPPIVK 12 0 A0A286YF23;A0A0J9YY01;A0A2R8YFM0;Q96JP2 A0A286YF23 MYO15B Unconventional myosin-XVB 1 AVPS(1)PPPPPIVK;AVPS(1)PPPPPIVK;AVPS(1)PPPPPIVK;AVPS(1)PPPPPIVK 103.88 0.010289 358574000 578829 699300 606560 692450 644020 626590 725630 555413 614550 618700 TRUE FALSE 623144.5933 664573.7789 626782.4077 635874.62 618732.5389 650435.3215 630353.9094 628007.3861 668002.4481 598511.8697 1.041156617 1.110376941 1.047234716 1.062426081 1.033784909 1.086754256 1.053202019 1.049281423 1.116105598 1 19.19102033 -10.92273586 3.49107358 0.999471141 1.066000824 0.351677265 0.02715479 18752075.17 58.60132608 79913.84604 0.006204583 1.19E-11 10.92273586 0.066529683 AVPS(ph)PTTGEEGSVHSR ddPTM_A459_MK2206_30min_R1 2 AVPSPTTGEEGSVHSR 16 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 AVPS(0.876)PT(0.122)T(0.001)GEEGSVHSR;AVPS(0.915)PT(0.084)T(0.002)GEEGSVHSR 158.58 4.49E-05 15592000 3491.62 1859.11 2553.53 1894.45 4399.1 4348.6 3864.25 3351 1731.43 2094.6 TRUE FALSE 3194.639384 1738.081601 2380.203498 2040.360867 4223.874532 4594.813974 3606.472933 3321.70256 1911.418344 2354.094861 1.357056352 0.738322669 1.011090733 0.866728398 1.794266918 1.951838921 1.531999832 1.411031737 0.811954682 1 11.20095674 -6.24514232 24.84366567 1.469907348 0.976357676 0.253720625 0.348327554 978.311332 1491363.053 0.106886004 0.137562459 5.69E-07 6.24514232 -0.493549672 AVPS(ph)PTTGEEGSVHSR ddPTM_A459_MK2206_30min_R2 2 AVPSPTTGEEGSVHSR 16 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 AVPS(0.841)PT(0.159)TGEEGSVHSR;AVPS(0.922)PT(0.078)TGEEGSVHSR 145.71 0.00024322 24033000 37975 67525 52213 82845 74465 91030 67201 52606 72118 36790 TRUE FALSE 40882.3952 64171.80669 53953.75536 76076.29849 71541.12994 94494.21044 58377.42798 59481.78482 78390.69328 35589.54531 1.148719233 1.80310836 1.516000131 2.137602429 2.010172631 2.655111483 1.6402971 1.671327473 2.202632616 1 15.11916588 -4.342454077 1.130026681 1.931527387 1.49E-11 0.18563768 0.426506644 6.076845198 3.308355571 0.126994034 17.71327843 4.55E-05 4.342454077 -1.931527387 AVPS(ph)SPAGSAAR ddPTM_A459_MK2206_30min_R1 1 AVPSSPAGSAAR 12 0 F8WBN8;B0QYH1;Q8IWD4-4;Q8IWD4-3;Q8IWD4 F8WBN8 CCDC117 Coiled-coil domain-containing protein 117 1 AVPS(0.627)S(0.373)PAGSAAR 140.45 0.0010735 23094000 3775.5 3181.7 3451.7 3103.2 3237.7 3200.7 3812.2 3078.8 2939.1 2301.1 TRUE FALSE 3454.373899 2974.570752 3217.408221 3342.209002 3108.735553 3381.920868 3557.895094 3051.882376 3244.629963 2586.17764 1.335706351 1.150180369 1.244078586 1.292335433 1.202058012 1.307690862 1.375734999 1.180074535 1.254604445 1 11.33660566 -9.263789758 1.23147638 0.999690257 1.261586184 0.579922689 0.066572466 3.823997905 5.688374276 0.066390131 0.019205208 5.45E-10 9.263789758 0.261895927 AVPSS(ph)PAGSAAR ddPTM_A459_MK2206_30min_R1 1 AVPSSPAGSAAR 12 0 F8WBN8;B0QYH1;Q8IWD4-4;Q8IWD4-3;Q8IWD4 F8WBN8 CCDC117 Coiled-coil domain-containing protein 117 1 AVPS(0.146)S(0.854)PAGSAAR 153.49 0.0004675 20590000 3773.3 3588.2 4026.8 2976.8 4030.2 3793.7 3955.6 3419.6 3147.9 2803.7 TRUE FALSE 3452.361021 3354.607528 3753.472035 3206.073652 3869.6686 4008.496016 3691.729141 3389.702798 3475.13547 3151.043523 1.09562467 1.064602092 1.191183812 1.017464097 1.228059394 1.272116994 1.171589384 1.075739758 1.10285226 1 11.62161397 -8.531717899 1.398249844 1.003995357 1.14646211 0.254090898 0.073961668 0.682633207 2.93975399 0.075105715 0.022520936 2.94E-09 8.531717899 0.142466752 AVPSS(ph)PAGSAAR ddPTM_A459_MK2206_30min_R2 1 AVPSSPAGSAAR 12 0 F8WBN8;B0QYH1;Q8IWD4-4;Q8IWD4-3;Q8IWD4 F8WBN8 CCDC117 Coiled-coil domain-containing protein 117 1 AVPS(0.207)S(0.793)PAGSAAR 140.01 0.0011107 21311000 79951 76360 69847 87640 75442 103520 100230 80968 87320 82869 TRUE FALSE 86072.11003 72568.07344 72175.66412 80479.53165 72479.76801 107459.5261 87069.6806 91550.7956 94914.93576 80164.99132 1.073687012 0.905233971 0.90033895 1.003923662 0.904132425 1.340479483 1.08613098 1.142029633 1.183994836 1 16.29068472 -6.733172362 24.99998813 1.155379234 0.95396909 0.511677171 0.094212609 163.6594926 144743.751 0.029547527 0.029542112 1.85E-07 6.733172362 -0.201410144 AVPTWASVQVVDDPGSLASVES(ph)PGTPK ddPTM_A459_MK2206_30min_R2 1 AVPTWASVQVVDDPGSLASVESPGTPK 27 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 AVPTWASVQVVDDPGS(0.011)LAS(0.166)VES(0.411)PGT(0.411)PK 54.255 0.0069944 1987500 7765 7497.3 9043.9 8097.9 8267.9 5557.8 8911.8 6978.8 5086.6 7621.8 TRUE FALSE 8359.49437 7124.994984 9345.419112 7436.275666 7943.260703 5769.305974 7741.669955 7890.953122 5529.023274 7373.10129 1.133782657 0.966349804 1.267501794 1.008568223 1.07732966 0.782480227 1.049988282 1.07023528 0.749891132 1 12.84805586 -6.563449081 24.99927048 0.940989743 1.090522471 0.299676252 0.122081825 206.6830404 127355.8678 0.039162711 0.039162737 2.73E-07 6.563449081 0.149532728 AVPVES(ph)PVQKV ddPTM_A459_MK2206_30min_R1 4 AVPVESPVQKV 11 1 Q8TB61-5;Q8TB61-4;Q8TB61-3;Q8TB61-2;Q8TB61 Q8TB61-5 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 1 AVPVES(1)PVQKV;AVPVES(1)PVQKV;AVPVES(1)PVQKV;AVPVES(1)PVQKV 142.1 0.0017054 66446000 19563.6 21609.9 17066 17711.5 24541.2 18540.4 25000.3 22413 24634.7 19609.6 TRUE FALSE 17899.61309 20203.09158 15907.60747 19075.6428 23563.67204 19590.14143 23332.5756 22217.0455 27195.56522 22038.98529 0.812179547 0.916697902 0.721794005 0.865540883 1.06918135 0.888885816 1.058695548 1.008079329 1.233975379 1 14.42777018 -6.662779319 0.789276002 1.089622326 0.815813996 0.550095849 0.093670028 0.50124388 0.690776513 0.060849358 0.06528527 2.17E-07 6.662779319 -0.27380833 AVPVES(ph)PVQKV ddPTM_A459_MK2206_30min_R2 4 AVPVESPVQKV 11 1 Q8TB61-5;Q8TB61-4;Q8TB61-3;Q8TB61-2;Q8TB61 Q8TB61-5 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 1 AVPVES(1)PVQKV;AVPVES(1)PVQKV;AVPVES(1)PVQKV;AVPVES(1)PVQKV 153.74 0.00099718 73512200 361404 346386 307689 317111 374670 329208 443215 285123 291071 345473 TRUE FALSE 389073.3681 329184.9749 317947.1977 291202.0169 359958.5732 341736.2411 385020.3381 322389.5551 316387.8294 334200.2443 1.164192351 0.984993221 0.951367341 0.871339928 1.077074537 1.022549346 1.152064801 0.964659843 0.946701371 1 18.35035326 -9.541688991 0.003319702 2.42E-08 2.00276892 0.016902885 0.087536721 304628.2487 303.282947 92597.82265 90369.39641 2.87E-10 9.541688991 2.002768895 AVQGTDGGGGSNSS(ph)SR ddPTM_A459_MK2206_30min_R2 1 AVQGTDGGGGSNSSSR 16 0 Q9BXB5;Q9BXB5-2 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 1 AVQGTDGGGGS(0.007)NS(0.307)S(0.656)S(0.03)R 138.98 0.00053691 0 4673.2 3440.3 3079.2 3320.9 3579.4 2830.4 3790.8 3138.2 3778.7 3471.9 TRUE FALSE 5030.983785 3269.459705 3181.858991 3049.571847 3438.854771 2938.112855 3293.063406 3548.373515 4107.364496 3358.612187 1.497935309 0.973455559 0.947373145 0.907985703 1.023891589 0.874799677 0.980483373 1.056499922 1.22293503 1 11.7136495 -4.760144293 24.99526796 0.992290766 1.49793592 0.732538716 0.090443865 17.34773268 334682.6878 0.023516056 0.142145445 1.74E-05 4.760144293 0.505645155 AVQGTDGGGGSNSSS(ph)R ddPTM_A459_MK2206_30min_R2 1 AVQGTDGGGGSNSSSR 16 0 Q9BXB5;Q9BXB5-2 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 1 AVQGTDGGGGSNS(0.104)S(0.104)S(0.793)R 166.67 1.21E-05 0 3660.7 2810.2 2880.7 2631 2395.9 3039.2 3188.8 2736.5 4021 2922.7 TRUE FALSE 3940.966007 2670.649554 2976.7411 2416.038884 2301.824928 3154.858886 2770.10673 3094.169946 4370.739312 2827.332538 1.393881319 0.944582754 1.052844354 0.854529438 0.814133073 1.115842881 0.979759788 1.094377794 1.545887954 1 11.46522586 -8.015980385 23.16233171 1.288673734 1.011528198 0.204024659 0.194262332 363.716963 527172.8301 0.119099119 0.048058872 9.64E-09 8.015980385 -0.277145536 AVQQHQHGYDS(ph)DEEVDSELGTWEHQLR ddPTM_A459_MK2206_30min_R1 1 AVQQHQHGYDSDEEVDSELGTWEHQLR 27 0 Q8IWZ8 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 1 AVQQHQHGY(0.191)DS(0.803)DEEVDS(0.006)ELGTWEHQLR 64.545 0.00072706 3720700 449.97 378.81 481.9 367.73 411.9 369.99 439.12 471.84 406.93 472.85 TRUE FALSE 411.6976886 354.1494001 449.1899707 396.0526283 395.4931508 390.9385141 409.827106 467.7147526 449.2318297 531.4302278 0.774697537 0.666408084 0.84524731 0.745257999 0.744205222 0.735634696 0.771177635 0.880105662 0.845326077 1 9.053736481 -8.417140108 0.778283242 0.996438919 0.747435361 0.72116987 0.04725403 0.332376642 0.454958862 0.044606941 0.017001161 3.83E-09 8.417140108 -0.249003558 AVQQHQHGYDS(ph)DEEVDSELGTWEHQLR ddPTM_A459_MK2206_30min_R2 4 AVQQHQHGYDSDEEVDSELGTWEHQLR 27 0 Q8IWZ8 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 1 AVQQHQHGY(0.004)DS(0.996)DEEVDSELGTWEHQLR;AVQQHQHGY(0.041)DS(0.959)DEEVDSELGTWEHQLR;AVQQHQHGY(0.132)DS(0.868)DEEVDSELGTWEHQLR;AVQQHQHGY(0.137)DS(0.863)DEEVDSELGTWEHQLR 132.86 2.84E-12 50735200 76429.4 98618.5 94382.8 101023 99635 95430 108494 85071.4 91945.5 97770.4 TRUE FALSE 82280.89363 93721.24869 97529.47545 92769.09774 95722.82927 99061.65552 94248.60748 96190.52407 99942.75339 94580.15986 0.869959342 0.990918696 1.031183238 0.980851564 1.012081492 1.047383042 0.996494483 1.017026448 1.056698927 1 16.52924996 -4.763991707 3.195145681 1.017028481 0.845071769 0.803719647 0.021812237 0.152051916 2.289646002 0.005507125 0.067648719 1.72E-05 4.763991707 -0.171956712 AVQTLAGSQPTSDKPS(ph)QRPSESTNCSPTR ddPTM_A459_MK2206_30min_R2 1 AVQTLAGSQPTSDKPSQRPSESTNCSPTR 29 2 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 AVQTLAGSQPT(0.007)S(0.002)DKPS(0.196)QRPS(0.196)ES(0.196)T(0.196)NCS(0.153)PT(0.054)R 50.723 0.0088319 12361000 17682 20995 13641 21020 23084 22152 22645 18511 20958 20939 TRUE FALSE 19035.74752 19952.41883 14095.78413 19302.59876 22177.60617 22995.00988 19671.6843 20930.45126 22780.88896 20255.76214 0.939769503 0.985024345 0.695890089 0.952943593 1.09487888 1.135233013 0.971164855 1.033308503 1.124662148 1 14.30604475 -6.005030898 24.99127336 1.057512333 0.874659154 0.498331302 0.084660175 189.9600277 943647.6619 0.024594394 0.035359781 9.88E-07 6.005030898 -0.182853178 AVQTLAGSQPTSDKPSQRPS(ph)ESTNCSPTR ddPTM_A459_MK2206_30min_R2 1 AVQTLAGSQPTSDKPSQRPSESTNCSPTR 29 2 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 AVQTLAGSQPT(0.009)S(0.002)DKPS(0.072)QRPS(0.211)ES(0.211)T(0.211)NCS(0.211)PT(0.072)R 55.417 0.002757 11906000 16025 15262 19630 19304 19353 21161 20898 14690 20606 16545 TRUE FALSE 17251.88632 14504.11127 20284.4544 17726.80145 18593.10398 21966.29668 18154.0675 16610.03344 22398.27263 16005.138 1.077896755 0.906215946 1.267371415 1.107569422 1.161695949 1.372452813 1.134264977 1.037793828 1.399442643 1 13.9662475 -5.262534955 24.99994832 1.18769822 0.992056348 0.262049465 0.129502413 118.4059569 2701978.199 0.032090977 0.073586636 5.46E-06 5.262534955 -0.195641872 AVS(ph)LDSPVSVGSSPPVK ddPTM_A459_MK2206_30min_R1 2 AVSLDSPVSVGSSPPVK 17 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 AVS(0.972)LDS(0.028)PVSVGSSPPVK;AVS(0.972)LDS(0.028)PVSVGSSPPVK 272.95 7.70E-52 10397800 7363.3 5251.3 7143.4 6090.6 6198.2 5049.4 5180.2 5432.7 4818.4 4671.1 TRUE FALSE 6737.012669 4909.439416 6658.525911 6559.699067 5951.312569 5335.292664 4834.63831 5385.202477 5319.289923 5249.791133 1.283291563 0.935168522 1.26834111 1.2495162 1.133628447 1.016286654 0.920920126 1.025793663 1.013238391 1 12.35804431 -6.735926998 3.608406231 0.989555275 1.173928442 0.474069983 0.095203206 0.215948919 5.933041692 0.033847258 0.032109067 1.84E-07 6.735926998 0.184373168 AVS(ph)LDSPVSVGSSPPVK ddPTM_A459_MK2206_30min_R2 1 AVSLDSPVSVGSSPPVK 17 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 AVS(0.925)LDS(0.011)PVS(0.063)VGS(0.001)SPPVK 120.54 0.0014625 3390400 34344 38388 33508 42815 38678 36445 41149 33131 37705 44429 TRUE FALSE 36973.40305 36481.70774 34625.14 39316.87754 37159.30738 37831.94001 35746.08687 37461.33546 40984.51274 42979.28537 0.860261001 0.848820715 0.805623912 0.914786675 0.864586441 0.8802366 0.831705008 0.871613735 0.95358758 1 15.39135387 -8.369867828 2.605062883 0.998303391 0.858280104 0.758456659 0.027125309 0.126957774 1.648910332 0.026118484 0.007197128 4.27E-09 8.369867828 -0.140023287 AVS(ph)PAPQSSSR ddPTM_A459_MK2206_30min_R1 2 AVSPAPQSSSR 11 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 AVS(0.967)PAPQSS(0.004)S(0.028)R;AVS(1)PAPQSSSR 138.2 0.0037254 0 4238.4 3495.8 3757.8 3824.4 4222 4004.1 3813.4 3503.9 2667.4 2877.9 TRUE FALSE 3877.901823 3268.222785 3502.731006 4118.955951 4053.8288 4230.808682 3559.015044 3473.265772 2944.685775 3234.435979 1.198942211 1.010445965 1.082949556 1.273469618 1.253334067 1.308051453 1.100351056 1.073839703 0.910417085 1 11.65929844 -7.878628196 2.2364542 0.961150648 1.180949525 0.501433903 0.088509393 0.297558833 2.869716638 0.073417173 0.027921035 1.32E-08 7.878628196 0.219798877 AVS(ph)PAPQSSSR ddPTM_A459_MK2206_30min_R2 3 AVSPAPQSSSR 11 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 AVS(0.997)PAPQS(0.001)S(0.001)S(0.001)R;AVS(0.999)PAPQSSSR;AVS(0.989)PAPQS(0.009)S(0.002)SR 98 0.017867 0 256539 276016 268957 309798 343099 334067 319564 260705 276509 277820 TRUE FALSE 276179.8231 262309.4468 277923.8921 284486.5124 329627.2093 346780.1538 277604.8629 294780.0386 300559.253 268754.7562 1.027627667 0.976017878 1.034117112 1.058535732 1.226498143 1.290321923 1.032930047 1.096836547 1.11834022 1 18.03593076 -6.023895099 5.351859793 1.136684458 1.013568522 0.290208739 0.080726425 0.228467507 19.45110648 0.024969906 0.034274144 9.46E-07 6.023895099 -0.123115937 AVS(ph)PAVPFSR ddPTM_A459_MK2206_30min_R1 3 AVSPAVPFSR 10 0 I3L2J0 I3L2J0 CIC 1 AVS(1)PAVPFSR;AVS(1)PAVPFSR;AVS(1)PAVPFSR 115.91 0.0064985 88695000 12214.5 12262.1 11944.8 10740.7 12413.2 10788.8 12130.7 10962.2 9243.8 9471.8 TRUE FALSE 11175.59263 11463.83506 11134.02026 11567.95058 11918.75596 11399.65253 11321.48314 10866.35864 10204.72609 10645.23809 1.049820825 1.076897948 1.045915569 1.086678426 1.119632633 1.070868724 1.063525591 1.02077178 0.958618868 1 13.3779206 -7.894561808 2.506001334 0.979834675 1.07563629 0.758259739 0.021573197 0.142819282 1.743517159 0.016216923 0.006274895 1.27E-08 7.894561808 0.095801616 AVS(ph)PAVPFSR ddPTM_A459_MK2206_30min_R2 2 AVSPAVPFSR 10 0 I3L2J0 I3L2J0 CIC 1 AVS(0.999)PAVPFS(0.001)R;AVS(0.999)PAVPFS(0.001)R 99.343 0.018595 109553000 346190 503640 339520 470760 441790 474170 436620 352570 410620 350160 TRUE FALSE 372694.5726 478629.97 350839.4273 432297.4021 424443.1048 492214.8716 379291.2695 398652.1096 446334.9854 338734.3079 1.100256348 1.412995256 1.035736325 1.276213811 1.25302662 1.453100144 1.119730894 1.176887313 1.317655091 1 18.36979459 -10.54979113 6.755778819 0.999999936 1.240132229 0.239257602 0.127496764 1.17E-07 1.69E-08 0.117757347 0.028560344 2.82E-11 10.54979113 0.240132293 AVS(ph)PPHLDGPPS(ph)PR ddPTM_A459_MK2206_30min_R2 1 AVSPPHLDGPPSPR 14 0 P29590-2;P29590;P29590-9;P29590-8;P29590-5;P29590-3;P29590-4;P29590-12;P29590-13;P29590-11;H3BVD2;H3BT57;H3BUJ5;H3BRN3 P29590-2 PML Protein PML 2 AVS(1)PPHLDGPPS(1)PR 130.47 0.017624 9709100 48214 49357 58583 62667 49213 58894 62260 46695 46489 56309 TRUE FALSE 51905.30091 46906.00315 60536.12798 57546.90564 47280.65034 61135.25244 54085.18721 52798.19683 50532.52919 54471.64194 0.952886659 0.86110867 1.111332903 1.056456233 0.867986509 1.122331736 0.992905396 0.9692786 0.927685074 1 15.73321773 -5.236836172 24.98249673 1.005460293 0.906997666 0.212442818 0.076239572 1209.65352 1228297.709 0.019277078 0.050962198 5.80E-06 5.236836172 -0.098462627 AVS(ph)PSNPK ddPTM_A459_MK2206_30min_R1 2 AVSPSNPK 8 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AVS(0.5)PS(0.5)NPK;AVS(0.5)PS(0.5)NPK 81.338 0.043973 269257000 19572.5 24100 16124.5 16438.8 13448.1 14511 18434.5 17394.2 3191 13137.6 TRUE FALSE 17907.7561 22531.08562 15030.01387 17704.91922 12912.4337 15332.60028 17204.76814 17242.12434 3522.715869 14765.18507 1.212836548 1.525960258 1.017936029 1.199099039 0.87451892 1.038429265 1.165225363 1.167755383 0.238582575 1 13.84991182 -5.675743716 0.379805054 0.821353896 1.536330655 0.289227555 0.265925871 4.182551428 0.787073951 0.255523018 1.287289902 2.11E-06 5.675743716 0.714976758 AVS(ph)PSNPK ddPTM_A459_MK2206_30min_R2 2 AVSPSNPK 8 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AVS(0.967)PS(0.033)NPK;AVS(0.773)PS(0.227)NPK 93.556 0.023898 308830000 693790 852300 747350 839520 724150 637990 849240 642050 826330 694290 TRUE FALSE 746907.0958 809976.0214 772266.276 770928.5305 695716.2324 662269.1565 737733.7679 725968.1395 898202.6897 671635.3742 1.112072301 1.20597582 1.149829663 1.14783789 1.035854065 0.986054609 1.098414104 1.080896223 1.337336782 1 19.35731869 -6.086841033 8.203178456 1.089078791 1.158995456 0.101469534 0.093628493 0.769654584 66.16321319 0.028175115 0.036490726 8.19E-07 6.086841033 0.069916665 AVS(ph)PSSSEK ddPTM_A459_MK2206_30min_R2 2 AVSPSSSEK 9 0 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101 Q76FK4-2 NOL8 Nucleolar protein 8 1 AVS(0.993)PS(0.004)S(0.001)S(0.002)EK;AVS(0.983)PS(0.012)S(0.004)S(0.001)EK 92.611 0.025664 27628000 266350 157995 169373 166647 191900 129249 217898 275960 218085 266330 TRUE FALSE 286741.9608 150149.198 175019.8113 153031.407 184365.0418 134167.6613 189287.7309 312028.9195 237053.6391 257639.6739 1.112957319 0.582787564 0.679320109 0.593974541 0.715592591 0.520756991 0.734699466 1.211105863 0.920097575 1 17.97499525 -7.660754144 6.799182354 1.047156556 0.685835674 0.46418281 0.166022981 0.174572526 10.15746365 0.076367016 0.043566795 2.18E-08 7.660754144 -0.361320882 AVS(ph)VSSMSEFQR ddPTM_A459_MK2206_30min_R1 1 AVSVSSMSEFQR 12 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 AVS(0.977)VS(0.018)S(0.005)MSEFQR 110.15 0.0073399 9852100 1320.4 1665 1718.4 1288.5 1639.3 1530.3 1454.1 1618.1 1442.7 1549.1 TRUE FALSE 1208.093046 1556.608197 1601.759796 1387.740493 1574.00321 1616.944264 1357.099642 1603.953122 1592.673828 1741.014203 0.69390189 0.894081274 0.920015352 0.797087405 0.904072584 0.928736974 0.779487979 0.921275151 0.914796574 1 10.76571226 -4.079103059 0.026750604 1.610938017 3.59E-10 0.379102757 0.067536809 1260.256969 4.333689018 102.3334241 164.4887555 8.33E-05 4.079103059 -1.610938016 AVS(ph)VSSMSEFQR ddPTM_A459_MK2206_30min_R2 1 AVSVSSMSEFQR 12 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 AVS(0.997)VS(0.002)SMSEFQR 120.6 0.0030137 0 20611 27163 20564 24426 29168 20663 27552 15792 24558 19861 TRUE FALSE 22188.99401 25814.12492 21249.5935 22430.31767 28022.71776 21449.34494 23934.3893 17856.06862 26694.01045 19212.9372 1.154898586 1.343580352 1.106004422 1.167459063 1.458533772 1.116401138 1.245743379 0.929377348 1.389376865 1 14.22979047 -14.52287875 0.200811886 0.047383025 1.241806865 0.144534651 0.148211252 266.1839936 2.628141499 101.696912 0.337076994 3.00E-15 14.52287875 1.194423841 AVSEGCAS(ph)EDEVEGEA ddPTM_A459_MK2206_30min_R2 1 AVSEGCASEDEVEGEA 16 0 Q9BYX2-6;Q9BYX2-5;Q9BYX2-4;Q9BYX2-2;Q9BYX2 Q9BYX2-6 TBC1D2 TBC1 domain family member 2A 1 AVSEGCAS(1)EDEVEGEA 139.74 0.00053745 0 8051.3 8965.6 7663 10657 8439.8 6960 7779.6 7050 6970.4 9990.7 TRUE FALSE 8667.713718 8520.381341 7918.480595 9786.28901 8108.411045 7224.867677 6758.129175 7971.459206 7576.672792 9664.704277 0.896842104 0.881597729 0.819319492 1.012580285 0.838971459 0.747551862 0.699258765 0.82480115 0.783952884 1 13.23850987 -6.518083442 24.4689099 0.793182052 0.898967988 0.186879842 0.086209158 221.6272423 1130903.111 0.027022909 0.027750734 3.03E-07 6.518083442 0.105785935 AVSGGS(ph)PERR ddPTM_A459_MK2206_30min_R2 1 AVSGGSPERR 10 1 Q96HB5-2;Q96HB5;Q96HB5-5;Q96HB5-3;Q96HB5-4 Q96HB5-2 CCDC120 Coiled-coil domain-containing protein 120 1 AVS(0.005)GGS(0.995)PERR 67.456 0.042496 3796300 5696.7 9029.1 7594.8 10041 11140 12084 8781.2 10971 14177 11544 TRUE FALSE 6132.843732 8580.728024 7848.006841 9220.61818 10702.58763 12543.86509 7628.217892 12404.94737 15410.08983 11167.32023 0.549177744 0.768378434 0.702765452 0.825678676 0.958384591 1.12326546 0.683084011 1.110825795 1.379927281 1 13.44699541 -5.689441222 0.417404352 1.133945064 0.441008045 0.539167869 0.161913299 2.222300739 0.525038656 0.148366268 0.716435687 2.04E-06 5.689441222 -0.692937019 AVSLDS(ph)PVSVGSSPPVK ddPTM_A459_MK2206_30min_R2 1 AVSLDSPVSVGSSPPVK 17 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 AVS(0.023)LDS(0.796)PVS(0.164)VGS(0.016)S(0.001)PPVK 147.53 0.00038312 4993900 73401 95262 94188 103130 104570 93051 115330 85713 92359 92226 TRUE FALSE 79020.637 90531.4276 97328.18091 94703.9491 100464.0564 96592.12101 100187.0325 96915.9834 100392.2189 89216.67317 0.885716024 1.014736645 1.090919191 1.06150505 1.126068175 1.08266894 1.122963107 1.086299006 1.125262973 1 16.44502573 -4.665191772 1.488086432 1.093723525 0.75667528 0.74539857 0.035954527 0.662828576 1.111750692 0.009336535 0.359187896 2.16E-05 4.665191772 -0.337048244 AVSLDSPVSVGSS(ph)PPVK ddPTM_A459_MK2206_30min_R1 2 AVSLDSPVSVGSSPPVK 17 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 AVSLDSPVSVGS(0.208)S(0.791)PPVK;AVSLDSPVS(0.003)VGS(0.32)S(0.677)PPVK 195.6 9.43E-08 74079000 13533.1 13932.4 13971.9 11826.2 13327.3 12176.1 12825.6 12482.2 11877.2 11126 TRUE FALSE 12382.03878 13025.39823 13023.52636 12737.05597 12796.44542 12865.50026 11970.02763 12373.06944 13111.87744 12504.37288 0.990216695 1.041667452 1.041517754 1.018608138 1.023357632 1.028880087 0.957267329 0.989499399 1.048583369 1 13.61014508 AVSLDSPVSVGSS(ph)PPVK ddPTM_A459_MK2206_30min_R2 2 AVSLDSPVSVGSSPPVK 17 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 AVSLDSPVSVGS(0.024)S(0.976)PPVK;AVSLDSPVSVGS(0.327)S(0.673)PPVK 293.77 4.49E-76 76426000 112660 132999 110280 113433 117692 101534 123062 96131 96515 105536 TRUE FALSE 121285.3362 126394.4631 113956.6802 104165.161 113070.8207 105397.9475 106903.8116 108695.6518 104909.7002 102092.369 1.187996101 1.23804026 1.116211538 1.020303105 1.107534499 1.032378312 1.047128328 1.064679494 1.027595905 1 16.63951551 -5.474023471 3.578759912 1.048275951 1.2115406 0.83337423 0.030225144 0.08262019 2.127371317 0.007815358 0.016908848 3.36E-06 5.474023471 0.163264649 AVSPPHLDGPPS(ph)PR ddPTM_A459_MK2206_30min_R1 3 AVSPPHLDGPPSPR 14 0 P29590-2;P29590;P29590-9;P29590-8;P29590-5;P29590-3;P29590-4;P29590-12;P29590-13;P29590-11;H3BVD2;H3BT57;H3BUJ5;H3BRN3 P29590-2 PML Protein PML 1 AVSPPHLDGPPS(1)PR;AVS(0.005)PPHLDGPPS(0.995)PR;AVSPPHLDGPPS(1)PR 174.47 8.52E-05 27304200 5552.7 5918.4 5934 4897.8 6238.1 6160.8 6279.1 5859.6 5302.9 4510.53 TRUE FALSE 5080.413707 5533.111084 5531.216613 5275.029405 5989.623268 6509.619172 5860.232696 5808.370135 5854.155432 5069.328509 1.002186719 1.09148797 1.091114258 1.040577543 1.181541748 1.284118628 1.156017545 1.145786888 1.154818714 1 12.30757894 -6.263692609 24.89352917 1.167638684 1.061335833 0.307654029 0.069545623 214.2664956 2367192.139 0.020908422 0.024824451 5.45E-07 6.263692609 -0.106302851 AVSPPHLDGPPS(ph)PR ddPTM_A459_MK2206_30min_R2 3 AVSPPHLDGPPSPR 14 0 P29590-2;P29590;P29590-9;P29590-8;P29590-5;P29590-3;P29590-4;P29590-12;P29590-13;P29590-11;H3BVD2;H3BT57;H3BUJ5;H3BRN3 P29590-2 PML Protein PML 1 AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR 125.73 0.00089676 49241500 68199 72095 65562 69064 74279 68220 74106 58364 62282 64859 TRUE FALSE 73420.36788 68514.86714 67747.80436 63421.25028 71362.43324 70816.1599 64375.79318 65992.37519 67699.17578 62742.65614 1.170182654 1.091998193 1.079772654 1.010815515 1.137383044 1.128676474 1.026029135 1.051794413 1.078997606 1 15.93715898 -6.460045656 0.012510309 1.05E-07 2.168827534 0.358257829 0.042972793 2421.30605 9.720075631 806.3462018 878.1575588 3.47E-07 6.460045656 2.168827429 AVSPS(ph)NPK ddPTM_A459_MK2206_30min_R2 1 AVSPSNPK 8 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AVS(0.409)PS(0.591)NPK 82.287 0.041681 282990000 125250 169200 147880 159970 145410 142350 150680 142210 169190 146830 TRUE FALSE 134839.2363 160797.774 152810.2454 146899.9393 139700.4728 147767.229 130895.535 160797.3353 183905.8404 142038.9491 0.9493117 1.132068176 1.075833399 1.034222938 0.983536372 1.040328937 0.921546772 1.132065087 1.294756414 1 17.11592707 -7.980036949 22.70413017 1.169389033 1.02607655 0.283791146 0.08775994 84.61881029 96237.18363 0.045945162 0.022063622 1.05E-08 7.980036949 -0.143312483 AVSPT(ph)EPTPR ddPTM_A459_MK2206_30min_R2 2 AVSPTEPTPR 10 0 Q6PJI9-3;Q6PJI9;H3BMH3;Q6PJI9-2 Q6PJI9-3 WDR59 WD repeat-containing protein 59 1 AVS(0.036)PT(0.963)EPT(0.001)PR;AVS(0.024)PT(0.963)EPT(0.014)PR 138.25 0.0038769 24844000 162357 202468 194422 229423 210097 218277 232410 166630 234450 204113 TRUE FALSE 174787.1768 192413.7335 200903.9324 210678.407 201847.5361 226583.6842 201894.2878 188409.1131 254842.0372 197452.8095 0.885209875 0.974479593 1.017478216 1.066981055 1.022257098 1.147533351 1.022493872 0.954198188 1.290647815 1 17.59114837 -3.59938236 0.628964506 1.076387762 0.155190567 0.318479211 0.087920898 15.92611022 1.528332677 0.037387974 14.81331038 0.000251546 3.59938236 -0.921197195 AVSTVVVTTAPS(ph)PK ddPTM_A459_MK2206_30min_R2 4 AVSTVVVTTAPSPK 14 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 AVSTVVVTT(0.009)APS(0.991)PK;AVSTVVVT(0.01)T(0.173)APS(0.816)PK;AVSTVVVT(0.008)T(0.027)APS(0.965)PK;AVSTVVVT(0.023)T(0.453)APS(0.524)PK 217.48 1.18E-08 32403000 305817 277769 280875 245460 261152 193929 304101 242871 206753 314637 TRUE FALSE 329230.5847 263975.3954 290239.2323 225405.1328 250897.8603 201309.104 264172.1734 274615.0736 224736.0022 304370.4205 1.081677333 0.867283342 0.9535724 0.740561887 0.824317488 0.661395098 0.86792985 0.902239689 0.738363478 1 18.21546864 -3.586758227 0.953080625 0.817352553 3.097970321 0.362533909 0.097470508 16.99359541 2.071170016 0.030731914 67.11850231 0.000258965 3.586758227 2.280617768 AVSVS(ph)SMSEFQR ddPTM_A459_MK2206_30min_R1 1 AVSVSSMSEFQR 12 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 AVS(0.044)VS(0.952)S(0.005)MSEFQR 122.55 0.0035152 14845000 2211.2 2398.5 2605.1 2368.7 2590.4 2341.2 2621.5 2634.7 2393.5 2192.1 TRUE FALSE 2023.125829 2242.357214 2428.27307 2551.137684 2487.218883 2473.756721 2446.624518 2611.665096 2642.31289 2463.673898 0.821182475 0.910168028 0.985630879 1.035501365 1.009556859 1.004092597 0.993079693 1.060069313 1.072509188 1 11.26659559 -4.925658488 1.292686123 1.026137878 0.761824567 0.875602457 0.02478037 0.370474811 0.655790024 0.008115687 0.121631068 1.19E-05 4.925658488 -0.26431331 AVT(ph)PSSEAK ddPTM_A459_MK2206_30min_R2 2 AVTPSSEAK 9 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5 Q99700 ATXN2 Ataxin-2 1 AVT(0.567)PS(0.344)S(0.089)EAK;AVT(0.829)PS(0.138)S(0.033)EAK 113.44 0.021306 489260000 488510 533130 504180 511450 504390 403700 556780 401470 414610 474590 TRUE FALSE 525910.7012 506655.5394 520989.1096 469662.899 484585.1142 419063.0864 483674.1172 453943.5075 450672.0284 459104.1672 1.145514981 1.103574255 1.134794992 1.022998554 1.05550145 0.912784323 1.053517157 0.988759284 0.981633495 1 18.808462 -5.926703882 1.606617777 0.99366187 1.131287574 0.680861143 0.03941907 0.214077171 1.122546311 0.012575313 0.02300008 1.18E-06 5.926703882 0.137625704 AVT(ph)PVPTKTEEVSNLK ddPTM_A459_MK2206_30min_R1 2 AVTPVPTKTEEVSNLK 16 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 AVT(0.993)PVPT(0.005)KT(0.002)EEVSNLK;AVT(0.999)PVPT(0.001)KTEEVSNLK 162.59 0.00039629 202919000 11460.7 11848.9 11801.5 11919.9 11698.2 9381.7 9585.6 11808.2 7763 4920.5 TRUE FALSE 10485.90728 11077.53446 11000.44706 12837.97276 11232.23592 9912.883746 8946.162114 11704.96215 8569.99163 5530.088688 1.896155356 2.003138662 1.989199031 2.321476831 2.031113162 1.792536125 1.61772489 2.116595739 1.549702385 1 12.4330869 -9.288164771 0.430941292 0.88608203 2.050071679 0.730816665 0.182531235 1.709360474 0.490885431 0.544496243 0.121305765 5.15E-10 9.288164771 1.163989649 AVT(ph)PVPTKTEEVSNLK ddPTM_A459_MK2206_30min_R2 1 AVTPVPTKTEEVSNLK 16 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 AVT(1)PVPTKTEEVSNLK 168.42 0.00013556 41103000 44285 86154 75384 72241 89005 68841 83872 59475 85207 75127 TRUE FALSE 47675.49365 81875.71764 77897.26494 66338.67921 85510.21649 71460.79249 72859.50565 67248.58671 92618.15084 72675.61214 0.656004019 1.126591373 1.071848762 0.912805235 1.176601255 0.983284356 1.002530333 0.925325356 1.274404826 1 16.1491837 -4.754207717 24.93413822 1.046642811 0.656003312 0.547869828 0.107962063 185.0689394 638045.2018 0.025443417 0.253515243 1.76E-05 4.754207717 -0.390639499 AVT(ph)PVSQGSNSSSADPK ddPTM_A459_MK2206_30min_R1 2 AVTPVSQGSNSSSADPK 17 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 AVT(0.999)PVSQGSNSSSADPK;AVT(0.996)PVS(0.004)QGSNSSSADPK 149.42 0.00070441 14172800 14813.3 15309.8 16008.4 14561.4 14598.8 12203.7 14201 14105.8 13766.6 12853.2 TRUE FALSE 13553.35105 14313.12924 14921.79441 15682.92155 14017.29888 12894.66295 13253.6772 13982.47448 15197.68733 14445.55145 0.938237013 0.990833011 1.03296814 1.085657519 0.970354017 0.892639024 0.917491952 0.967943282 1.052066955 1 13.81833766 -6.501215776 24.81234183 0.957713992 1.013931237 0.138055883 0.053308533 1255.975318 1438571.41 0.017797118 0.019991693 3.15E-07 6.501215776 0.056217244 AVT(ph)PVSQGSNSSSADPK ddPTM_A459_MK2206_30min_R2 3 AVTPVSQGSNSSSADPK 17 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 AVT(0.998)PVS(0.002)QGSNSSSADPK;AVT(0.998)PVS(0.002)QGSNSSSADPK;AVT(0.791)PVS(0.009)QGS(0.051)NS(0.094)S(0.028)S(0.028)ADPK 188.09 1.56E-07 25404100 181764 206191 197471 215071 200192 165157 216354 162432 160503 210607 TRUE FALSE 195679.9916 195951.8548 204054.5846 197499.0113 192331.4562 171442.1654 187946.4599 183662.4201 174463.2608 203734.9108 0.960463726 0.961798123 1.001569067 0.969392091 0.944027979 0.841496259 0.922504931 0.901477412 0.85632482 1 17.63633369 -6.531215798 24.73688447 0.898606479 0.972278524 0.380721497 0.041261406 158.0499173 468946.0084 0.01285416 0.012874865 2.94E-07 6.531215798 0.073672045 AVTELNEPLSNEDR ddPTM_A459_MK2206_30min_R2 2 AVTELNEPLSNEDR 14 0 Q04917 Q04917 YWHAH 14-3-3 protein eta 0 ; 255.54 3.57E-27 8711900 22648 25649 21023 25966 24480 29182 24942 17113.2 18595 23808 FALSE TRUE 24381.94829 24375.30796 21723.89633 23844.49474 23518.7922 30292.54146 21667.08544 19349.954 20212.35949 23031.14691 1.058651069 1.058362749 0.943239883 1.035315125 1.021173296 1.315285842 0.940773185 0.840164586 0.877609768 1 14.49129864 -7.505818919 24.9810709 0.893426044 1.067093084 0.386911948 0.097288313 738.4549523 1081340.155 0.042572535 0.027931453 3.12E-08 7.505818919 0.17366704 AVTEQGAELSNEER ddPTM_A459_MK2206_30min_R1 1 AVTEQGAELSNEER 14 0 P27348;E9PG15 P27348 YWHAQ 14-3-3 protein theta 0 359.65 2.10E-187 9396400 1317.5 1219.8 1420.6 1262.5 1228 1372.1 1482 1529.4 1073.7 1004.2 FALSE TRUE 1205.439707 1140.390798 1324.17363 1359.737969 1179.08616 1449.787116 1383.138484 1516.028617 1185.314957 1128.607877 1.068076637 1.010440226 1.173280514 1.204792201 1.044726147 1.284580008 1.225526165 1.343273113 1.050245157 1 10.14032861 -5.272632156 20.67137825 1.181506066 1.039258487 0.177101513 0.104825614 90.32042544 166813.1956 0.026617324 0.05664987 5.34E-06 5.272632156 -0.142247578 AVTEQGAELSNEER ddPTM_A459_MK2206_30min_R2 2 AVTEQGAELSNEER 14 0 P27348;E9PG15 P27348 YWHAQ 14-3-3 protein theta 0 ; 255.24 4.77E-27 47891000 36540 35756 34537 36951 33367 35835 36967 35602 39299 31982 FALSE TRUE 39337.53049 33980.40903 35688.44634 33931.9851 32056.84392 37198.72604 32113.18849 40255.30364 42717.15598 30938.42996 1.271477917 1.098323641 1.153531268 1.09675847 1.036149668 1.202346922 1.037970852 1.30114242 1.380715054 1 14.91711237 -7.773298355 24.99772465 1.255696566 1.126030232 0.124359568 0.113255797 347.4789009 732445.0561 0.057728499 0.028081197 1.69E-08 7.773298355 -0.129666334 AVTEQGHELSNEER ddPTM_A459_MK2206_30min_R1 5 AVTEQGHELSNEER 14 0 P31946-2;P31946;Q4VY20;A0A0J9YWZ2;Q4VY19;A0A0J9YWE8 P31946-2 YWHAB "14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed" 0 ;;;; 264.28 4.36E-36 114242000 12933.51 11107.07 12328.7 10005.5 15140.7 13229 13578.9 12620.7 10565.8 10550.74 FALSE TRUE 11833.44706 10383.99772 11491.86219 10776.12534 14537.61386 13978.01455 12673.07636 12510.35855 11664.15272 11857.84533 0.997942437 0.875706964 0.969135781 0.908776008 1.225991186 1.17879886 1.068750351 1.055027976 0.983665447 1 13.53355426 -6.232273862 24.99536222 1.09196395 0.935680429 0.47708764 0.075438167 633.367247 542806.8576 0.023374849 0.030171396 5.86E-07 6.232273862 -0.156283521 AVTEQGHELSNEER ddPTM_A459_MK2206_30min_R2 2 AVTEQGHELSNEER 14 0 P31946-2;P31946;Q4VY20;A0A0J9YWZ2;Q4VY19;A0A0J9YWE8 P31946-2 YWHAB "14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed" 0 ; 215.02 1.01E-05 66533000 74239.2 94318.4 78272.1 109694.9 99876.4 101391 112583.7 63130.2 86098.7 93972 FALSE TRUE 79923.01023 89634.68541 80881.65275 100732.4758 95954.7507 105249.5056 97801.32495 71381.5339 93587.4093 90905.70134 0.879185893 0.986018303 0.889731354 1.108098549 1.055541614 1.15778773 1.075854688 0.78522615 1.029499887 1 16.47208316 -5.746123868 24.89576779 1.029601512 0.925082483 0.219601892 0.096473165 416.7523661 677436.2078 0.028318548 0.048811592 1.79E-06 5.746123868 -0.104519028 AVTGQTT(ph)QVSPPVIAGR ddPTM_A459_MK2206_30min_R2 1 AVTGQTTQVSPPVIAGR 17 0 Q6MZP7-3;Q6MZP7 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 AVTGQT(0.077)T(0.717)QVS(0.206)PPVIAGR 104.78 0.0063694 9982200 6762.6 10679 9200.4 8829.7 9589.8 12229 12720 4679.4 12445 8810.8 TRUE FALSE 7280.349856 10148.69639 9507.136744 8108.285265 9213.256267 12694.38316 11049.84872 5291.013647 13527.4436 8523.304318 0.854169883 1.190699758 1.115428523 0.951307728 1.080948881 1.489373451 1.296427806 0.620770238 1.587112592 1 13.05719713 -6.541232688 24.98423614 1.192698453 1.04207505 0.086679513 0.26260046 719.5382055 979462.2294 0.085264114 0.085278189 2.88E-07 6.541232688 -0.150623402 AVTGQTTQVS(ph)PPVIAGR ddPTM_A459_MK2206_30min_R1 1 AVTGQTTQVSPPVIAGR 17 0 Q6MZP7-3;Q6MZP7 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 AVTGQT(0.096)T(0.048)QVS(0.855)PPVIAGR 135.43 0.00051652 3138200 1305.7 1425 1373.8 921.59 1385.3 1078.3 1235.8 997.56 1013.8 1023.1 TRUE FALSE 1194.643358 1332.232241 1280.550284 992.5710215 1330.120568 1139.352414 1153.362037 988.8384381 1119.188138 1149.849352 1.038956413 1.158614595 1.113667874 0.863218316 1.156778116 0.990871032 1.003054909 0.859972166 0.973334582 1 10.16722914 -6.417826415 0.594018597 0.943104967 1.106603843 0.226282155 0.088306017 1.322040152 1.003100282 0.067023785 0.110811656 3.82E-07 6.417826415 0.163498876 AVTGQTTQVS(ph)PPVIAGR ddPTM_A459_MK2206_30min_R2 1 AVTGQTTQVSPPVIAGR 17 0 Q6MZP7-3;Q6MZP7 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 AVTGQT(0.006)T(0.01)QVS(0.984)PPVIAGR 135.95 0.00051523 7328400 11802 15057 10763 12088 13148 15858 12589 10057 13136 11800 TRUE FALSE 12705.57019 14309.29127 11121.83305 11100.37173 12631.74346 16461.4873 10936.04918 11371.48443 14278.54554 11414.96697 1.113062371 1.253555207 0.974320213 0.97244011 1.106594832 1.442096797 0.95804475 0.996190744 1.250861748 1 13.47863906 -10.98615071 3.574895393 0.99861727 1.114845382 0.05305934 0.149531787 112302145.4 2189.641587 1280045.994 0.03694349 1.03E-11 10.98615071 0.116228112 AVTIANS(ph)PSKPSEK ddPTM_A459_MK2206_30min_R1 2 AVTIANSPSKPSEK 14 1 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 AVT(0.035)IANS(0.687)PS(0.235)KPS(0.043)EK;AVT(0.007)IANS(0.831)PS(0.162)KPS(0.001)EK 198.16 0.00045901 187463000 9866.6 10942.1 11096.1 9168.4 7527.9 7185.3 9222.5 8337.9 10470.5 10521.7 TRUE FALSE 9027.393858 10229.7673 10342.92765 9874.551757 7228.047802 7592.125477 8607.283852 8265.002619 11558.94594 11825.20763 0.763402567 0.865081411 0.874650828 0.835042569 0.611240667 0.642028936 0.727875917 0.698930867 0.977483551 1 13.52957789 -8.272329771 23.01910456 0.988742011 0.753689389 0.55946778 0.083922919 236.5466912 499975.0362 0.08935747 0.024162432 5.34E-09 8.272329771 -0.235052622 AVTIANS(ph)PSKPSEK ddPTM_A459_MK2206_30min_R2 4 AVTIANSPSKPSEK 14 1 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 AVT(0.007)IANS(0.954)PS(0.021)KPS(0.019)EK;AVT(0.005)IANS(0.693)PS(0.27)KPS(0.033)EK;AVT(0.004)IANS(0.861)PS(0.097)KPS(0.038)EK;AVTIANS(0.998)PS(0.001)KPS(0.001)EK 102.9 0.034472 700388000 1343741 1039439 1193910 1016661 1063541 696202 1428271 1027318 774290 1268947 TRUE FALSE 1446618.844 987821.9707 1233714.364 933596.5442 1021781.036 722696.455 1240737.302 1161591.99 841636.3446 1227541.363 1.178468512 0.804715833 1.005028751 0.760541821 0.832380127 0.588734911 1.010749893 0.946275233 0.685627686 1 20.22734021 -2.897207713 1.704913436 0.841310387 199.9507262 0.32658414 0.138635948 926.2429823 5.915554429 0.037152432 718534.094 0.001267046 2.897207713 199.1094158 AVTIANS(ph)PSKPSEKDSVVSLESQK ddPTM_A459_MK2206_30min_R1 1 AVTIANSPSKPSEKDSVVSLESQK 24 2 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 AVT(0.003)IANS(0.461)PS(0.461)KPS(0.076)EKDSVVSLESQK 72.145 0.00039326 143780000 3292.5 3924.1 3155.9 3652.5 2749.3 2482.2 2411 3223.7 2545.4 1472.2 TRUE FALSE 3012.455585 3668.640377 2941.686301 3933.816183 2639.789559 2622.740019 2250.166589 3195.515531 2810.003439 1654.587251 1.820668922 2.217254107 1.777897358 2.37752115 1.595436903 1.585132496 1.359956441 1.931306753 1.698310825 1 10.69225566 -6.372481419 8.450971294 1.566855612 2.040483792 0.451810329 0.278734829 0.306666736 21.22239234 0.08268907 0.093744177 4.24E-07 6.372481419 0.473628181 AVTIANS(ph)PSKPSEKDSVVSLESQK ddPTM_A459_MK2206_30min_R2 1 AVTIANSPSKPSEKDSVVSLESQK 24 2 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 AVT(0.049)IANS(0.342)PS(0.342)KPS(0.108)EKDS(0.021)VVS(0.128)LES(0.01)QK 43.768 0.031589 135270000 22233 46001 46188 40229 51375 34048 52861 44921 48580 40814 TRUE FALSE 23935.17557 43716.65723 47727.88487 36942.16201 49357.75936 35343.7205 45920.2872 50792.32894 52805.40059 39482.24252 0.606226345 1.107248587 1.208844326 0.935665242 1.25012553 0.895180168 1.163061778 1.286460082 1.337446842 1 15.26891631 -4.762444856 5.491697997 1.135823587 0.580687515 0.555929593 0.141036772 0.114112088 10.89520328 0.035363781 0.241177788 1.73E-05 4.762444856 -0.555136072 AVTIANSPS(ph)KPSEK ddPTM_A459_MK2206_30min_R2 1 AVTIANSPSKPSEK 14 1 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 AVTIANS(0.179)PS(0.82)KPS(0.001)EK 127.79 0.0056355 12399000 30049 21908 23987 23002 20173 14858 30126 19897 18849 26067 TRUE FALSE 32349.57454 20820.08058 24786.71461 21122.66302 19380.90666 15423.4316 26170.42001 22497.60622 20488.45195 25216.43592 1.282876559 0.825655166 0.982958681 0.837654579 0.768582313 0.611642012 1.037831837 0.892180254 0.812503877 1 14.62207676 -4.758838002 24.98722537 0.857433601 1.282877126 0.527749058 0.118979165 56.8858403 546299.5403 0.030092438 0.199613964 1.74E-05 4.758838002 0.425443525 AVTIANSPS(ph)KPSEKDSVVSLESQK ddPTM_A459_MK2206_30min_R2 1 AVTIANSPSKPSEKDSVVSLESQK 24 2 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 AVTIANS(0.009)PS(0.985)KPS(0.004)EKDS(0.001)VVSLESQK 80.412 0.00028343 28488000 36205 63861 55673 55085 78604 40189 70691 52431 62403 60591 TRUE FALSE 38976.88264 60689.7556 57529.11003 50584.37929 75517.61201 41718.42056 61409.18678 59283.91172 67830.70014 58613.92063 0.664976549 1.035415392 0.98149227 0.863009653 1.288390389 0.711749361 1.047689459 1.01143058 1.157245573 1 15.83895572 -4.758435009 24.96845651 1.006032193 0.664976078 0.335259641 0.145916389 95.04938127 789786.132 0.034328284 0.235616776 1.74E-05 4.758435009 -0.341056115 AVTPS(ph)SEAK ddPTM_A459_MK2206_30min_R2 1 AVTPSSEAK 9 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5 Q99700 ATXN2 Ataxin-2 1 AVT(0.041)PS(0.479)S(0.479)EAK 86.898 0.033236 18767000 84241 98307 90150 100400 92404 82556 109950 88821 79763 98361 TRUE FALSE 90690.55573 93425.21733 93155.55601 92196.99884 88775.75467 85697.72643 95513.43293 100430.2097 86700.64156 95151.48863 0.953117571 0.981857653 0.979023632 0.968949621 0.93299386 0.900645147 1.003803874 1.05547702 0.91118534 1 16.53793861 AVTPVPT(ph)KTEEVSNLK ddPTM_A459_MK2206_30min_R1 1 AVTPVPTKTEEVSNLK 16 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 AVT(0.058)PVPT(0.759)KT(0.183)EEVSNLK 78.505 0.036157 47856000 7902 7530.7 7646.9 8763.2 8581.7 6736.8 6533.8 8093.9 4921.6 3477.4 TRUE FALSE 7229.893405 7040.450061 7127.849733 9438.143182 8239.872717 7118.231794 6097.942124 8023.135886 5433.217932 3908.206565 1.849926119 1.801452903 1.823816018 2.41495505 2.108351383 1.821355058 1.560291664 2.052894532 1.390207463 1 11.93229101 -8.627936328 0.831972439 0.988699292 1.96860451 0.636610567 0.225794529 0.525416607 0.787059426 0.232347405 0.082600544 2.36E-09 8.627936328 0.979905218 AVTPVSQGSNS(ph)SSADPK ddPTM_A459_MK2206_30min_R2 1 AVTPVSQGSNSSSADPK 17 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 AVT(0.112)PVS(0.012)QGS(0.104)NS(0.438)S(0.104)S(0.232)ADPK 107.97 0.0023901 9460600 36934 39585 36724 36838 35939 32634 38689 32535 28157 36231 TRUE FALSE 39761.69544 37619.26646 37948.35983 33828.21756 34527.85428 33875.90974 33609.08783 36787.43621 30606.04496 35048.78544 1.134467142 1.073340088 1.082729668 0.965175173 0.98513697 0.96653591 0.958923038 1.049606591 0.873241243 1 15.09707683 -5.720027187 4.985398095 0.97293072 1.097207405 0.6354646 0.043654924 0.119694317 6.7674553 0.011375356 0.019561639 1.91E-06 5.720027187 0.124276685 AVTSGLPGDTALLLPPS(ph)PRPSPR ddPTM_A459_MK2206_30min_R1 1 AVTSGLPGDTALLLPPSPRPSPR 23 1 H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;Q6W2J9-3 H7BYY2 BCOR BCL-6 corepressor 1 AVTSGLPGDTALLLPPS(0.991)PRPS(0.009)PR 82.942 0.00021546 10920000 1934.1 1779.9 1977.2 1565.7 2530.4 1887.5 2171.7 1607.2 1657.9 1224.4 TRUE FALSE 1769.594639 1664.028186 1842.993173 1686.290485 2429.60881 1994.368619 2026.829855 1593.14842 1830.244638 1376.087916 1.285960452 1.209245549 1.339299002 1.225423511 1.765591269 1.449303199 1.472892707 1.157737381 1.330034671 1 10.42635693 -8.722161953 1.074139652 1.006266264 1.383350243 0.312738326 0.163736446 1.030507705 2.358136924 0.166508864 0.0530434 1.90E-09 8.722161953 0.377083979 AVTSGLPGDTALLLPPS(ph)PRPSPR ddPTM_A459_MK2206_30min_R2 2 AVTSGLPGDTALLLPPSPRPSPR 23 1 H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;Q6W2J9-3 H7BYY2 BCOR BCL-6 corepressor 1 AVTSGLPGDTALLLPPS(0.997)PRPS(0.003)PR;AVTSGLPGDTALLLPPS(0.798)PRPS(0.202)PR 131.31 4.11E-06 13822800 30997 50143 43012 41232 47695 53424 41899 32535 45139 40496 TRUE FALSE 33370.15415 47652.97153 44445.99861 37863.21371 45822.25465 55457.08776 36397.61097 36787.43621 49065.10863 39174.61884 0.851830985 1.216424638 1.134561099 0.966524113 1.169692419 1.415638222 0.929112064 0.939063029 1.252471883 1 15.25763162 -11.00119003 3.096370139 0.997616654 1.099910909 0.029603267 0.166428395 39883192.27 38021838.87 795293.9334 0.042820915 9.97E-12 11.00119003 0.102294256 AVTT(ph)PGK ddPTM_A459_MK2206_30min_R2 2 AVTTPGK 7 0 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 NCL Nucleolin 1 AVT(0.273)T(0.727)PGK;AVT(0.125)T(0.875)PGK 120.87 0.021304 39329000 439200 222755 267620 287540 429330 272144 405380 950290 555170 488590 TRUE FALSE 472825.4897 211693.3106 276542.3172 264047.0622 412472.347 282500.6306 352153.1191 1074496.166 603457.6831 472647.3483 1.000376901 0.447888497 0.585092285 0.558655546 0.872685203 0.597698541 0.745065259 2.273357017 1.276760962 1 18.85040464 -7.63671052 9.241751861 1.579087592 0.666682146 0.558996627 0.33675986 0.17221252 13.23165701 0.147764987 0.085087893 2.31E-08 7.63671052 -0.912405446 AVTTVTQSTPVPGPSVPPPEELQVS(ph)PGPR ddPTM_A459_MK2206_30min_R1 3 AVTTVTQSTPVPGPSVPPPEELQVSPGPR 29 0 P51610;P51610-2;H7C1C4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR;AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR;AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR 219.01 1.89E-46 106633200 5693.32 5628.86 6281.97 5086.03 5311.82 5559.3 5632.68 4767.51 5129.57 4619.56 TRUE FALSE 5209.073237 5262.420191 5855.567379 5477.756912 5100.238961 5874.062762 5256.934195 4725.828163 5662.807158 5191.865969 1.003314274 1.013589377 1.127834851 1.055065162 0.982351816 1.131397227 1.012532725 0.910236934 1.090707501 1 12.34203742 -7.51072966 24.92456437 0.9925603 1.052642888 0.132119832 0.061013627 1000.179488 2051941.126 0.026081338 0.01656292 3.09E-08 7.51072966 0.060082588 AVTTVTQSTPVPGPSVPPPEELQVS(ph)PGPR ddPTM_A459_MK2206_30min_R2 4 AVTTVTQSTPVPGPSVPPPEELQVSPGPR 29 0 P51610;P51610-2;H7C1C4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR;AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR;AVTTVTQSTPVPGPS(0.002)VPPPEELQVS(0.998)PGPR;AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR 198.89 7.48E-42 83297000 106502 134569 108113 133797 128568.5 142889 136754 90820.8 116260 123965 TRUE FALSE 114655.875 127886.4991 111717.4335 122865.3571 123520.2547 148326.741 118798.0355 102691.3904 126372.0847 119920.0322 0.95610277 1.066431494 0.931599428 1.024560741 1.030021861 1.23688043 0.990643793 0.856332245 1.053802958 1 16.87171315 -7.515019353 24.99637319 0.957738159 1.042371994 0.113442949 0.089382753 733.115867 2331656.481 0.040983846 0.025015808 3.05E-08 7.515019353 0.084633835 AVVIVDDR ddPTM_A459_MK2206_30min_R1 1 AVVIVDDR 8 0 Q15233-2;Q15233;H7C367;C9IZL7;P23246;P23246-2 Q15233-2;P23246 NONO;SFPQ "Non-POU domain-containing octamer-binding protein;Splicing factor, proline- and glutamine-rich" 0 146.54 0.025427 9765800 3939.7 3870 4180 4342.3 4531.5 3643.4 4334.1 3912 3446 3121.1 FALSE TRUE 3604.607827 3618.062297 3896.273246 4676.744698 4351.000759 3849.686159 4044.980097 3877.797796 3804.224032 3507.765431 1.027608002 1.031443626 1.110756498 1.333254686 1.240391025 1.097475369 1.153150111 1.105489484 1.084514944 1 11.77633656 -10.38409145 11.67876208 1.000053531 1.136006236 0.164037351 0.088591969 0 0 0.095282429 0.023109383 4.13E-11 10.38409145 0.135952705 AVVLPGGTATS(ph)PK ddPTM_A459_MK2206_30min_R1 2 AVVLPGGTATSPK 13 0 Q8N1G0;Q8N1G0-2;F8WCX2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 AVVLPGGTAT(0.279)S(0.721)PK;AVVLPGGTAT(0.046)S(0.954)PK 158.34 0.00036464 26890000 13515.8 16742.1 16495.9 14443.6 9904.4 8438.8 11614.9 11424.3 14257.8 12433.8 TRUE FALSE 12366.21024 15652.18625 15376.20427 15556.04857 9509.886775 8916.597563 10840.09121 11324.41855 15739.94933 13974.19301 0.884931976 1.120078006 1.100328602 1.113198348 0.68053209 0.638076027 0.775722162 0.81038086 1.126358375 1 13.77047735 -6.248938199 24.86692412 0.815869378 1.062572683 0.330115635 0.148569061 791.7025081 1574826.919 0.045555176 0.058389657 5.64E-07 6.248938199 0.246703306 AVVLPGGTATS(ph)PK ddPTM_A459_MK2206_30min_R2 2 AVVLPGGTATSPK 13 0 Q8N1G0;Q8N1G0-2;F8WCX2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 AVVLPGGTAT(0.044)S(0.956)PK;AVVLPGGTAT(0.348)S(0.651)PK 203.74 5.16E-05 24889000 226370 210332 212714 176539 178823 120030 237470 162199 135532 229613 TRUE FALSE 243701.0612 199887.2187 219805.7786 162115.199 171801.5105 124597.8258 206289.9037 183398.9662 147320.3284 222120.7466 1.097155781 0.899903416 0.989577885 0.729851675 0.77345999 0.560946367 0.928728662 0.825672383 0.663244342 1 17.76098462 -5.755008434 24.81188869 0.772271564 0.985981542 0.373163974 0.125426852 144.519666 557578.0427 0.033332578 0.055984923 1.76E-06 5.755008434 0.213709978 AVVMPLQLIQEQAAS(ph)PNAEIHILK ddPTM_A459_MK2206_30min_R1 2 AVVMPLQLIQEQAASPNAEIHILK 24 0 H3BRB3;Q14807-2;Q14807;I3L306 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 AVVMPLQLIQEQAAS(1)PNAEIHILK;AVVMPLQLIQEQAAS(1)PNAEIHILK 130.69 7.61E-08 5596000 3615.97 3343.55 3159.94 3098.84 3400.23 2992.88 3333.27 2953.51 2752.45 2403.45 TRUE FALSE 3308.412763 3125.884287 2945.452077 3337.513194 3264.791639 3162.334279 3110.91364 2927.687773 3038.577027 2701.207531 1.224790293 1.157217375 1.090420504 1.235563412 1.208641543 1.170711337 1.151675169 1.083844073 1.124895808 1 11.39938877 -8.480865499 0.687514933 1.002606346 1.181669107 0.622838706 0.042380186 0.528171957 0.575521721 0.044005957 0.01778379 3.30E-09 8.480865499 0.179062761 AVVMPLQLIQEQAAS(ph)PNAEIHILK ddPTM_A459_MK2206_30min_R2 2 AVVMPLQLIQEQAASPNAEIHILK 24 0 H3BRB3;Q14807-2;Q14807;I3L306 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 AVVMPLQLIQEQAAS(1)PNAEIHILK;AVVMPLQLIQEQAAS(1)PNAEIHILK 120.15 9.91E-08 13381500 60564 62445 63403 58230 61852 54742 65546 60224 64835 64672 TRUE FALSE 65200.82641 59344.0721 65516.82438 53472.42273 59423.3797 56825.24517 56939.73147 68095.48358 70474.23111 62561.75794 1.042183413 0.948567848 1.047234389 0.854714198 0.949835517 0.908306401 0.910136373 1.088452208 1.126474598 1 15.93299343 -7.770019223 24.99726947 1.080597605 0.949676644 0.434679846 0.062475151 167.676793 488515.5215 0.033351795 0.016418848 1.70E-08 7.770019223 -0.130920962 AVVVS(ph)PK ddPTM_A459_MK2206_30min_R1 1 AVVVSPK 7 0 G3V5E1;O75909-1;O75909 G3V5E1 CCNK Cyclin-K 1 AVVVS(1)PK 84.615 0.037299 74984000 12744 16035 16204 12492 8938.8 7487.4 11610 10150 15836 17712 TRUE FALSE 11660.05588 14991.11859 15104.11763 13454.136 8582.748668 7911.330118 10835.51808 10061.25962 17482.20887 19906.29628 0.585747128 0.753084269 0.758760817 0.675873393 0.431157486 0.397428532 0.544326174 0.505431019 0.878225091 1 14.2809372 -8.409805392 4.070873621 0.994878275 0.584529224 0.608943545 0.116237027 0.166642403 4.428734126 0.129830211 0.034133861 3.89E-09 8.409805392 -0.410349051 AVVVS(ph)PKEENK ddPTM_A459_MK2206_30min_R1 2 AVVVSPKEENK 11 1 G3V5E1;O75909-1;O75909 G3V5E1 CCNK Cyclin-K 1 AVVVS(1)PKEENK;AVVVS(1)PKEENK 133.88 0.008243 210340000 7456.5 9314.9 11205 9000.4 5109.8 5168.2 5746.3 6612.3 6024.7 4097.9 TRUE FALSE 6822.285519 8708.498317 10444.43582 9693.612367 4906.265846 5460.819018 5362.974812 6554.489358 6650.989125 4605.57879 1.481309045 1.890858612 2.267779208 2.104754432 1.065287572 1.18569658 1.164451865 1.423163007 1.444115806 1 12.16916676 -6.260593758 24.99949422 1.231072786 1.956624426 0.70657322 0.227743821 45.43283141 1343149.361 0.073485158 0.089389609 5.49E-07 6.260593758 0.72555164 AVVVS(ph)PKEENK ddPTM_A459_MK2206_30min_R2 1 AVVVSPKEENK 11 1 G3V5E1;O75909-1;O75909 G3V5E1 CCNK Cyclin-K 1 AVVVS(1)PKEENK 63.76 0.04697 27978000 74090 96998 96443 73823 94878 53522 105520 77660 71177 83401 TRUE FALSE 79762.38737 92181.22037 99658.36148 67791.42475 91152.613 55558.81721 91665.09725 87810.42865 77367.8468 80679.6322 0.988631024 1.142558758 1.235235694 0.840254509 1.129809476 0.688634984 1.136161566 1.088384097 0.958951407 1 16.29991689 -5.753799062 24.99999745 0.982065757 1.12418348 0.183423777 0.139638844 304.8045497 997344.0305 0.037394332 0.063225669 1.76E-06 5.753799062 0.142117723 AVYDEQGTVDEDSPVLTQDRDWEAYWR ddPTM_A459_MK2206_30min_R1 1 AVYDEQGTVDEDSPVLTQDRDWEAYWR 27 1 Q8WXX5 Q8WXX5 DNAJC9 DnaJ homolog subfamily C member 9 0 57.981 0.019979 4750700 299.97 216.72 322.32 346.27 383.15 234.36 332.05 283.35 188.34 193.68 FALSE TRUE 274.4559763 202.6114886 300.4418164 372.9397754 367.8883242 247.6292607 309.8995504 280.8727008 207.918617 217.6745406 1.26085474 0.93080012 1.380234067 1.713290743 1.690084303 1.137612419 1.423683034 1.290333266 0.955181145 1 7.766028868 -8.191364807 3.970334156 0.973252646 1.363335044 0.321267049 0.220011032 0.295868317 8.730288846 0.193058744 0.063329887 6.44E-09 8.191364807 0.390082398 AWGPGLHGGIVGR ddPTM_A459_MK2206_30min_R1 2 AWGPGLHGGIVGR 13 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 0 ; 123.62 0.0031625 8264500 9712.3 9867 9366.2 8258.6 10171.4 10022.7 9487.5 9382.5 7927.4 6928.2 FALSE TRUE 8886.217884 9224.656507 8730.44844 8894.678803 9766.2516 10590.17661 8854.606186 9300.469792 8751.481598 7786.517721 1.141231318 1.184696014 1.121226298 1.14231793 1.254251509 1.36006582 1.137171519 1.194432495 1.123927526 1 12.92676256 -8.657614357 1.723668176 1.000101899 1.194910871 0.432966869 0.067328206 0.578374659 3.529426147 0.069825827 0.01986923 2.20E-09 8.657614357 0.194808972 AWGPGLHGGIVGR ddPTM_A459_MK2206_30min_R2 2 AWGPGLHGGIVGR 13 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 0 ; 144.55 0.00093204 11465200 63213 76565 66651 75817 66429 79493 78087 59876 66621 61855 FALSE TRUE 68052.63588 72762.89344 68873.11107 69622.50857 63820.66368 82518.16182 67834.0831 67701.99879 72415.57416 59836.67642 1.137306414 1.216024983 1.151018325 1.163542375 1.066581025 1.379056571 1.133653925 1.131446511 1.210220529 1 15.86874242 -11.10783169 2.994269853 0.98991557 1.176702226 0.311384085 0.078759016 226945513.5 198615804 17724905.24 0.019112237 7.80E-12 11.10783169 0.186786656 AWLDEDS(ph)NLSPSPLRDLSGGLGGQEEEEEQR ddPTM_A459_MK2206_30min_R1 1 AWLDEDSNLSPSPLRDLSGGLGGQEEEEEQR 31 1 Q9C086;B8ZZ93;B8ZZH7;F8WCL7;J3KQ70 Q9C086 INO80B;INO80B-WBP1 INO80 complex subunit B 1 AWLDEDS(0.807)NLS(0.102)PS(0.083)PLRDLS(0.009)GGLGGQEEEEEQR 73.616 3.08E-05 7283300 188.49 398.17 541.7 404.78 335.19 331.67 384.26 362.91 288.74 0 TRUE FALSE 172.4579357 372.2490606 504.9309133 435.9562257 321.8386725 350.4488688 358.6267165 359.7371161 318.7555563 0 0 AWLDEDSNLS(ph)PSPLR ddPTM_A459_MK2206_30min_R1 2 AWLDEDSNLSPSPLR 15 0 Q9C086;B8ZZ93;B8ZZH7;F8WCL7;J3KQ70 Q9C086 INO80B;INO80B-WBP1 INO80 complex subunit B 1 AWLDEDS(0.029)NLS(0.925)PS(0.046)PLR;AWLDEDS(0.015)NLS(0.984)PS(0.002)PLR 133.23 0.00055555 10778000 2953.1 2712 2683.7 2229.42 2848 2547.6 3096.3 2082.58 2954.5 3314.3 TRUE FALSE 2701.923338 2535.448307 2501.537921 2401.130315 2734.558129 2691.84291 2889.751477 2064.372223 3261.630848 3724.900506 0.725367922 0.680675444 0.671571742 0.64461596 0.734129173 0.722661694 0.77579293 0.554208688 0.875628985 1 11.86298618 -8.492976476 5.812221635 0.999732129 0.692434451 0.765304013 0.057243631 0.068364927 7.276301174 0.05324618 0.01380922 3.21E-09 8.492976476 -0.307297678 AWLDEDSNLS(ph)PSPLRDLSGGLGGQEEEEEQR ddPTM_A459_MK2206_30min_R1 1 AWLDEDSNLSPSPLRDLSGGLGGQEEEEEQR 31 1 Q9C086;B8ZZ93;B8ZZH7;F8WCL7;J3KQ70 Q9C086 INO80B;INO80B-WBP1 INO80 complex subunit B 1 AWLDEDS(0.045)NLS(0.544)PS(0.375)PLRDLS(0.037)GGLGGQEEEEEQR 80.685 7.45E-06 5315200 216.19 171.35 191.45 164.42 214.42 246.11 218.06 178.82 74.479 0 TRUE FALSE 197.8019052 160.1950839 178.4549074 177.0836569 205.8791974 260.0445355 203.5136153 177.2565956 82.22135858 0 0 AWLDEDSNLSPS(ph)PLR ddPTM_A459_MK2206_30min_R1 1 AWLDEDSNLSPSPLR 15 0 Q9C086;B8ZZ93;B8ZZH7;F8WCL7;J3KQ70 Q9C086 INO80B;INO80B-WBP1 INO80 complex subunit B 1 AWLDEDSNLSPS(1)PLR 172.57 3.82E-05 15281000 2217.5 2374.3 2381.4 2005.8 2130.9 2485.5 2854.4 2133.9 2726.8 2984.2 TRUE FALSE 2028.88998 2219.732638 2219.757203 2160.287064 2046.021741 2626.226862 2663.988184 2115.243537 3010.260618 3353.905226 0.604933605 0.661835231 0.661842555 0.644110945 0.610041609 0.783035502 0.794294414 0.630680772 0.897538963 1 11.71162621 -8.76226628 0.329858903 1.049721675 0.612792275 0.737384058 0.065720342 1.190600835 0.318384203 0.171378522 0.07621334 1.73E-09 8.76226628 -0.436929399 AWLDEDSNLSPS(ph)PLR ddPTM_A459_MK2206_30min_R2 2 AWLDEDSNLSPSPLR 15 0 Q9C086;B8ZZ93;B8ZZH7;F8WCL7;J3KQ70 Q9C086 INO80B;INO80B-WBP1 INO80 complex subunit B 1 AWLDEDSNLS(0.013)PS(0.987)PLR;AWLDEDS(0.001)NLS(0.004)PS(0.995)PLR 89.911 0.027746 0 24273.5 22103.3 22871.1 20006 22499.6 15814.9 21128.1 14852 18411.1 19921.7 TRUE FALSE 26131.89782 21005.68226 23633.61106 18371.4458 21616.15265 16416.7471 18353.95509 16793.20739 20012.4642 19271.65656 1.355975691 1.089978031 1.226340402 0.953288356 1.121655141 0.851859675 0.952380769 0.871394078 1.038440268 1 14.23419297 -4.603044242 0.552611529 0.939111848 1.634669376 0.615231031 0.092832661 3.069255408 0.619549069 0.048630066 1.434753407 2.49E-05 4.603044242 0.695557528 AWSS(ph)QDEVSTNVR ddPTM_A459_MK2206_30min_R2 1 AWSSQDEVSTNVR 13 0 A1L390-3;A1L390;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 AWS(0.051)S(0.949)QDEVSTNVR 163.62 1.48E-06 0 21127 21126 18963 16890 19922 15565 22344 16222 13024 16053 TRUE FALSE 22744.49936 20076.91356 19595.21696 15510.03297 19139.76218 16157.33698 19410.20596 18342.2711 14156.80398 15529.19192 1.464628647 1.292849857 1.261831076 0.998766262 1.232502134 1.040449307 1.249917321 1.181147814 0.911625283 1 13.92269514 -1.522878745 0.495113567 1.085346538 12.96730164 0.564641681 0.106815199 81.28940954 0.875404744 0.058800732 1002.099574 0.03 1.522878745 11.88195511 AYDSHSLK ddPTM_A459_MK2206_30min_R2 1 AYDSHSLK 8 0 Q9NVP1 Q9NVP1 DDX18 ATP-dependent RNA helicase DDX18 0 87.696 0.045113 1303100 29007 40297 31849 41461 43857 37791 38846 30084 37717 36098 FALSE TRUE 31227.79822 38295.90958 32910.82976 38073.50367 42134.95382 39229.16299 33745.47354 34016.08209 40997.55648 34920.12522 0.894263638 1.0966716 0.942460245 1.09030261 1.206609471 1.123396974 0.966361756 0.974111115 1.174038072 1 15.09177111 -4.172846321 2.066155714 1.064530157 5.05E-18 0.245126096 0.086915486 14.34537196 10.51428237 0.024090855 53.79749177 6.72E-05 4.172846321 -1.064530157 AYEFAER ddPTM_A459_MK2206_30min_R1 2 AYEFAER 7 0 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 ; 162.31 0.0068801 29189000 7782.1 7033.2 8078.9 6826.2 8699.6 6915.4 8188.7 7289.6 6230.4 6392.9 FALSE TRUE 7120.19153 6575.337402 7530.526777 7351.955107 8353.07651 7306.943972 7642.446764 7225.867796 6878.072376 7184.900716 0.990993726 0.91516051 1.048104501 1.023250758 1.162587604 1.016986074 1.06368161 1.00570183 0.957295396 1 12.81075251 -5.274016809 24.36791225 1.039465404 0.953077118 0.266005095 0.05377092 605.0992394 1172339.875 0.014371059 0.03027252 5.32E-06 5.274016809 -0.086388287 AYGELPEHAK ddPTM_A459_MK2206_30min_R1 2 AYGELPEHAK 10 0 X6RAC9;A6NJH9;P47813;O14602 X6RAC9 EIF1AX;EIF1AY "Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal" 0 ; 97.472 0.028935 11729800 16185.4 16626 15957 15263.3 15737.3 13947.9 15503.5 15746.8 14394.1 12774.4 FALSE TRUE 14808.74674 15543.64438 14873.8833 16438.88201 15110.45002 14737.61804 14469.2898 15609.12739 15890.4182 14356.98911 1.031466042 1.082653491 1.036002966 1.145009018 1.052480426 1.026511752 1.007822022 1.087214545 1.10680715 1 13.8094656 -6.49553536 24.7743934 1.047727489 1.075096273 0.090094046 0.042127056 1789.192467 1621094.942 0.013394531 0.015148991 3.19E-07 6.49553536 0.027368784 AYHLQK ddPTM_A459_MK2206_30min_R1 1 AYHLQK 6 0 P61927;D6R9X9;D6RG19 P61927 RPL37 60S ribosomal protein L37;Ribosomal protein L37 0 123.53 0.023595 5842400 12571 10372 9352.6 12974 5419 7445.3 12339 17770 0 6876.9 FALSE TRUE 11501.77044 9696.780915 8717.77157 13973.25973 5203.149755 7866.846452 11515.88782 17614.63876 0 7728.86229 1.488158283 1.254619445 1.127950175 1.807932294 0.673210307 1.017853101 1.489984863 2.279072663 0 1 12.91604035 -8.279977533 24.9927196 0.500000119 1.359596511 0.361766361 0.472500402 1060.759114 1430077.475 0.447383734 0.11635409 5.25E-09 8.279977533 0.859596392 AYILVT(ph)PLK ddPTM_A459_MK2206_30min_R2 2 AYILVTPLK 9 0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 AYILVT(1)PLK;AYILVT(1)PLK 104.43 0.033561 38295000 166007 166787 159096 201998 160876 151424 191451 134017 103235 136397 TRUE FALSE 178716.6236 158504.6001 164400.1812 185494.1172 154559.1999 157186.5464 166313.2537 151533.482 112214.1937 131946.3771 1.354464045 1.201280427 1.245962071 1.40582956 1.171378884 1.191291113 1.260460934 1.148447463 0.850453011 1 17.00959221 -8.072634539 3.631129977 0.928837301 1.256572995 0.748415741 0.076862503 0.118418662 2.914937035 0.057589864 0.020198116 8.46E-09 8.072634539 0.327735694 AYLGYQAVPSGSSGSLST(ph)SSSSSPPGTPSPADAK ddPTM_A459_MK2206_30min_R2 3 AYLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAK 34 0 P17676-3;P17676-2;P17676 P17676-3 CEBPB CCAAT/enhancer-binding protein beta 1 AYLGYQAVPSGSSGS(0.001)LS(0.017)T(0.221)S(0.221)S(0.221)S(0.221)S(0.049)S(0.049)PPGTPSPADAK;AYLGYQAVPSGSSGS(0.002)LS(0.015)T(0.164)S(0.164)S(0.164)S(0.164)S(0.164)S(0.164)PPGTPSPADAK;AYLGYQAVPSGSSGSLS(0.015)T(0.219)S(0.219)S(0.219)S(0.219)S(0.053)S(0.053)PPGT(0.001)PSPADAK 120.29 8.27E-19 39003400 209029 245751 222802 251949 251177 225771 281563 211679 220993 241692 TRUE FALSE 225032.421 233547.3627 230230.1075 231363.9608 241314.5289 234362.8736 244593.4399 239346.1721 240214.5717 233805.6098 0.962476568 0.998895462 0.984707371 0.989556927 1.032116077 1.002383449 1.046140168 1.023697303 1.027411497 1 17.83495002 -6.184335583 5.175615827 1.023344104 0.984386751 0.601512726 0.015172635 0.149598948 7.199488827 0.004339001 0.005629791 6.54E-07 6.184335583 -0.038957353 AYLGYQAVPSGSSGSLSTS(ph)SSSSPPGTPSPADAK ddPTM_A459_MK2206_30min_R1 1 AYLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAK 34 0 P17676-3;P17676-2;P17676 P17676-3 CEBPB CCAAT/enhancer-binding protein beta 1 AYLGYQAVPSGSSGSLS(0.007)T(0.02)S(0.279)S(0.279)S(0.279)S(0.069)S(0.069)PPGTPSPADAK 131.69 2.16E-25 33596000 14925 14614 14554 12433 14624 12483 13933 14085 13166 12204 TRUE FALSE 13655.55038 13662.62594 13566.11503 13390.59181 14041.49511 13189.77667 13003.55499 13961.85633 14534.65281 13715.92366 0.995598307 0.996114173 0.989077759 0.976280719 1.02373675 0.961639697 0.948062655 1.017930449 1.059691872 1 13.74356416 -7.986137206 24.68661723 1.03283435 0.985156148 0.399893914 0.023537425 174.4527868 310662.1447 0.012874548 0.006179921 1.03E-08 7.986137206 -0.047678202 AYLGYQAVPSGSSGSLSTSSS(ph)SSPPGTPSPADAK ddPTM_A459_MK2206_30min_R2 1 AYLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAK 34 0 P17676-3;P17676-2;P17676 P17676-3 CEBPB CCAAT/enhancer-binding protein beta 1 AYLGYQAVPSGSSGS(0.005)LS(0.013)T(0.035)S(0.035)S(0.097)S(0.272)S(0.272)S(0.272)PPGTPSPADAK 105.69 4.20E-14 6409700 33638 38762 26475 40573 34782 29996 39402 30731 32476 38299 TRUE FALSE 36213.35114 36837.13545 27357.66329 37258.05611 33416.28391 31137.5188 34228.47007 34747.64722 35300.70378 37049.30677 0.977436673 0.994273271 0.738412286 1.005634366 0.901940868 0.840434586 0.923862632 0.937875773 0.952803355 1 15.17715893 -8.41011187 1.376411296 0.997901526 0.909290171 0.119245587 0.074526593 0.89900146 3.629149402 0.070103452 0.02137499 3.89E-09 8.41011187 -0.088611356 AYLGYQAVPSGSSGSLSTSSSSS(ph)PPGTPSPADAK ddPTM_A459_MK2206_30min_R1 1 AYLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAK 34 0 P17676-3;P17676-2;P17676 P17676-3 CEBPB CCAAT/enhancer-binding protein beta 1 AYLGYQAVPSGSSGSLS(0.001)T(0.006)S(0.02)S(0.02)S(0.02)S(0.059)S(0.873)PPGT(0.001)PSPADAK 152.33 9.01E-28 33169000 8552.3 9078.8 9015.3 7414.6 8580 7734.4 8518.9 8405.6 7917.1 7004 TRUE FALSE 7824.881975 8487.76847 8403.366554 7985.673777 8238.240432 8172.315044 7950.619725 8332.110725 8740.110877 7871.708398 0.994051301 1.078262563 1.067540377 1.014477846 1.046563213 1.038188235 1.010024676 1.058488235 1.110319442 1 12.94246106 -7.979664274 24.89888698 1.064907773 1.037888202 0.053076351 0.034793706 487.7808218 597235.2234 0.018261982 0.008771101 1.05E-08 7.979664274 -0.027019572 AYQDQIS(ph)PVPGAPK ddPTM_A459_MK2206_30min_R2 2 AYQDQISPVPGAPK 14 0 W0Z7M9;A0A499FIJ6;A0A494BZX7;B0QY83;Q969V6;E7ER32;A0A087X287;A0A087WU73 W0Z7M9 mkl1;MKL1 MKL/myocardin-like protein 1 1 AYQDQIS(1)PVPGAPK;AYQDQIS(1)PVPGAPK 111.81 0.0038139 24208000 240860 292220 240020 245150 230980 192511 208647 168077 185032 215763 TRUE FALSE 259300.4268 277708.7797 248022.147 225120.4608 221910.5646 199837.141 181251.3983 190045.241 201125.7489 208722.671 1.242320375 1.330515648 1.188285613 1.078562572 1.06318381 0.957429014 0.868383858 0.910515566 0.963602794 1 17.67122779 -5.978451919 1.000973855 0.927691622 1.302914897 0.892619477 0.046998757 0.170212926 0.344638371 0.020099864 0.044313494 1.05E-06 5.978451919 0.375223275 AYQDTTLNS(ph)SSEYCVEK ddPTM_A459_MK2206_30min_R2 1 AYQDTTLNSSSEYCVEK 17 0 X6R717;Q7L7V1-2;Q7L7V1 X6R717 DHX32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 1 AYQDTTLNS(0.333)S(0.333)S(0.333)EYCVEK 144.73 0.00049307 4457200 15820 16844 18322 22325 18490 17138 19912 15759 15821 21918 TRUE FALSE 17031.19136 16007.55145 18932.84634 20500.97609 17763.9897 17790.1986 17297.53048 17818.75541 17197.08198 21202.81745 0.803251332 0.754972847 0.892940119 0.966898674 0.837812698 0.839048803 0.815812829 0.840395643 0.811075321 1 14.37196836 -11.97883151 2.175552397 2.54926538 0.842191363 0.442063614 0.053802469 2997606.545 305624.9193 22839012.82 0.015430502 1.05E-12 11.97883151 -1.707074017 AYQDTTLNSSS(ph)EYCVEK ddPTM_A459_MK2206_30min_R1 1 AYQDTTLNSSSEYCVEK 17 0 X6R717;Q7L7V1-2;Q7L7V1 X6R717 DHX32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 1 AYQDTTLNS(0.223)S(0.223)S(0.554)EYCVEK 201.04 1.41E-21 0 532.81 548.18 599.73 662.73 592.3 532.48 752.27 506.01 669.76 565.29 TRUE FALSE 487.4917116 512.4933824 559.0219985 713.7735794 568.7074368 562.6285574 702.0874409 501.5860079 739.3839488 635.3223929 0.767313913 0.806666644 0.879902873 1.123482483 0.895147791 0.885579611 1.105088454 0.789498392 1.163793307 1 9.31134506 -5.527673465 24.58393204 0.983325775 0.801063864 0.3620516 0.111079155 110.3927141 566013.585 0.028478865 0.04957018 2.97E-06 5.527673465 -0.182261912 AYQHGGVTGLS(ph)QY ddPTM_A459_MK2206_30min_R1 2 AYQHGGVTGLSQY 13 0 Q92900-2;Q92900 Q92900-2 UPF1 Regulator of nonsense transcripts 1 1 AYQHGGVTGLS(0.998)QY(0.002);AYQHGGVT(0.001)GLS(0.995)QY(0.005) 91.307 0.019963 26419000 6683.6 6281.6 5021 5557.5 6115 5976.9 6105.9 4583 4911.8 3836.9 TRUE FALSE 6115.124723 5872.666698 4680.188509 5985.539613 5871.426601 6315.306913 5698.586552 4542.931314 5422.399187 4312.244139 1.418084071 1.361858584 1.085325496 1.388033567 1.361571008 1.464505884 1.321489778 1.053495852 1.257442532 1 12.07422314 -7.714267985 7.860801026 1.11689261 1.341531049 0.484703199 0.112861134 0.214118054 30.92009751 0.055065197 0.031358936 1.93E-08 7.714267985 0.224638438 AYQHGGVTGLS(ph)QY ddPTM_A459_MK2206_30min_R2 1 AYQHGGVTGLSQY 13 0 Q92900-2;Q92900 Q92900-2 UPF1 Regulator of nonsense transcripts 1 1 AYQHGGVTGLS(0.911)QY(0.089) 88.224 0.024082 10504000 96166 95617 79025 74600 92402 85115 87572 69906 67698 78800 TRUE FALSE 103528.5429 90868.79882 81659.65406 68504.94137 88773.8332 88354.11097 76073.69121 79042.95422 73586.24967 76228.76245 1.358129656 1.192053969 1.071244651 0.898675764 1.164571355 1.159065268 0.997965712 1.036917716 0.965334439 1 16.21804783 -4.955315997 2.104846911 1.039841777 1.387213114 0.638435392 0.07705395 0.319662311 2.115556959 0.021978803 0.186537593 1.11E-05 4.955315997 0.347371336 AYS(ph)FCGTVEYMAPEVVNR ddPTM_A459_MK2206_30min_R1 9 AYSFCGTVEYMAPEVVNR 18 0 B4DG22;B1AXG1;B7ZB17;P51812;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q9UK32-2;Q9UK32 B4DG22;E9PGT3;Q9UK32-2 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 1 AYS(1)FCGTVEYMAPEVVNR;AYS(1)FCGTVEYMAPEVVNR;AYS(1)FCGTVEYMAPEVVNR;AYS(1)FCGTVEYMAPEVVNR;AYS(0.999)FCGT(0.001)VEYMAPEVVNR;AYS(0.95)FCGT(0.04)VEY(0.01)MAPEVVNR;AYS(0.861)FCGT(0.124)VEY(0.015)MAPEVVNR;AYS(0.494)FCGT(0.458)VEY(0.048)MAPEVVNR;AYS(0.999)FCGT(0.001)VEYMAPEVVNR 265.56 2.06E-43 271977900 12975.56 13350.66 12916.35 10171.87 12912.26 11580.43 14359.87 11774.79 11921.54 11396.65 TRUE FALSE 11871.92048 12481.52961 12039.62415 10955.30919 12397.93734 12236.10394 13401.94927 11671.84425 13160.82674 12808.55304 0.926874444 0.974468355 0.939967544 0.855312005 0.96794207 0.955307278 1.046328124 0.911253926 1.027503005 1 13.64481989 -6.714940271 2.658837701 0.988351559 0.928462493 0.305528499 0.044672149 0.374652022 5.414681026 0.016288194 0.015525124 1.93E-07 6.714940271 -0.059889066 AYS(ph)FCGTVEYMAPEVVNR ddPTM_A459_MK2206_30min_R2 10 AYSFCGTVEYMAPEVVNR 18 0 B4DG22;B1AXG1;B7ZB17;P51812;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q9UK32-2;Q9UK32 B4DG22;E9PGT3;Q9UK32-2 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 1 AYS(1)FCGTVEYMAPEVVNR;AYS(0.97)FCGT(0.03)VEYMAPEVVNR;AYS(1)FCGTVEYMAPEVVNR;AYS(0.989)FCGT(0.01)VEY(0.001)MAPEVVNR;AYS(0.998)FCGT(0.002)VEYMAPEVVNR;AYS(0.586)FCGT(0.004)VEY(0.409)MAPEVVNR;AYS(0.787)FCGT(0.211)VEY(0.002)MAPEVVNR;AYS(0.999)FCGTVEYMAPEVVNR;AYS(0.983)FCGT(0.014)VEY(0.003)MAPEVVNR;AYS(0.625)FCGT(0.346)VEY(0.029)MAPEVVNR 237.06 7.54E-25 143511300 155350.1 187169.4 157192.7 197473.3 188108.5 183469.9 188994.4 147603.3 154804.9 161281.9 TRUE FALSE 167243.8231 177874.8398 162433.4262 181339.0997 180722.4151 190451.9756 164179.2083 166895.5581 168269.5504 156019.2848 1.071943275 1.140082394 1.041111209 1.162286444 1.158333826 1.220695094 1.052300736 1.069711083 1.078517637 1 17.25136484 -8.207765235 1.060367439 1.011460756 1.126931261 0.340941778 0.052211723 0.584845827 1.309062611 0.051113294 0.01748222 6.20E-09 8.207765235 0.115470505 AYS(ph)FCGTVEYMAPEVVNRR ddPTM_A459_MK2206_30min_R1 2 AYSFCGTVEYMAPEVVNRR 19 1 B4DG22;B1AXG1;B7ZB17;P51812;Q9UK32-2;Q9UK32 B4DG22;Q9UK32-2 RPS6KA3;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-6 1 AYS(0.994)FCGT(0.006)VEYMAPEVVNRR;AY(0.001)S(0.943)FCGT(0.056)VEYMAPEVVNRR 141.64 5.19E-05 48881000 2000.38 1904.88 2044.94 1931.58 1868.54 1599 1732.27 1522.2 1388.52 1132.7 TRUE FALSE 1830.237177 1780.871966 1906.13517 2080.350626 1794.112095 1689.533998 1616.713429 1508.891566 1532.861623 1273.027427 1.437704434 1.398926627 1.497324511 1.634175809 1.409327133 1.327178002 1.269975331 1.185278128 1.204107303 1 10.31404779 -7.644817855 0.692540137 1.04013366 1.491970601 0.826429194 0.071198968 0.304882065 0.283832681 0.072278488 0.038054502 2.27E-08 7.644817855 0.451836941 AYS(ph)GSDLPSSSSGGANGTAGGGGGAR ddPTM_A459_MK2206_30min_R1 4 AYSGSDLPSSSSGGANGTAGGGGGAR 26 0 Q8NHG8 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 1 AYS(0.985)GS(0.015)DLPSSSSGGANGTAGGGGGAR;AYS(0.333)GS(0.333)DLPS(0.333)SSSGGANGTAGGGGGAR;AYS(0.919)GS(0.05)DLPS(0.031)SSSGGANGTAGGGGGAR;AYS(0.951)GS(0.049)DLPSSSSGGANGTAGGGGGAR 369.95 2.78E-267 31571500 2745.08 3300.32 2929.94 3062 4623.17 4591.65 5675.04 5637.76 4903.9 5009.45 TRUE FALSE 2511.596531 3085.468568 2731.063836 3297.835771 4439.019349 4851.625255 5296.468436 5588.469659 5413.677954 5630.058485 0.446104874 0.548034905 0.485086228 0.585755153 0.788449953 0.861736209 0.940748387 0.992613074 0.961566912 1 12.45893419 -6.445082605 1.085329772 0.981460989 0.477633016 0.9798216 0.029984331 0.061701002 0.153866394 0.013868452 0.017279714 3.59E-07 6.445082605 -0.503827973 down AYS(ph)GSDLPSSSSGGANGTAGGGGGAR ddPTM_A459_MK2206_30min_R2 3 AYSGSDLPSSSSGGANGTAGGGGGAR 26 0 Q8NHG8 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 1 AYS(0.875)GS(0.124)DLPSSSSGGANGTAGGGGGAR;AYS(0.499)GS(0.499)DLPS(0.001)SSSGGANGTAGGGGGAR;AYS(0.989)GS(0.011)DLPSSSSGGANGTAGGGGGAR 296.81 5.61E-103 30619900 40634 48013.3 60161 67211.5 61661.4 84593.9 93079 73534.1 89843 81068 TRUE FALSE 43744.97028 45629.02934 62166.73771 61720.10545 59240.26361 87813.18014 80857.61549 83145.25935 97657.38174 78422.7578 0.55780964 0.581834032 0.792712976 0.787017789 0.755396332 1.119741037 1.031047846 1.060218509 1.245268395 1 16.25898476 -6.217224423 0.662104994 1.129666774 0.539762179 0.821778758 0.092815683 0.35165035 0.323397805 0.059800046 0.118975355 6.06E-07 6.217224423 -0.589904595 AYS(ph)PEYR ddPTM_A459_MK2206_30min_R2 1 AYSPEYR 7 0 Q9UDY2-7;Q9UDY2-4;A0A3B3IU51;A0A1B0GTW1;A0A2R8YDH4;A0A3B3ITE1;Q9UDY2-2;Q9UDY2-6;Q9UDY2-3;Q9UDY2;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3ISZ5;A0A3B3IRI3;A0A3B3IT83 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 AYS(1)PEYR 100.25 0.020692 49841000 121330 159660 134750 172470 134650 188820 142090 112380 139130 131300 TRUE FALSE 130619.1181 151731.5166 139242.4977 158378.6493 129362.9644 196005.6774 123433.4123 127068.4519 151231.2759 127015.6918 1.02836993 1.194588751 1.096262169 1.246921913 1.018480179 1.543161122 0.97179656 1.000415383 1.190650335 1 16.95464722 AYS(ph)TENYSLESQK ddPTM_A459_MK2206_30min_R1 3 AYSTENYSLESQK 13 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 AYS(0.499)T(0.499)ENYSLES(0.001)QK;AYS(0.5)T(0.5)ENYSLESQK;AYS(0.96)T(0.04)ENYSLESQK 214.48 8.84E-11 15099900 4816.9 3663.8 3872.9 3932.1 4823.9 5049.8 3189.6 3538 3384.7 2842.02 TRUE FALSE 4407.19736 3425.285954 3610.018339 4234.951023 4631.753848 5335.715312 2976.827604 3507.067639 3736.551677 3194.110894 1.379788463 1.072375402 1.130210709 1.32586224 1.450091748 1.670485305 0.93197378 1.097979299 1.169825282 1 11.64119869 -7.304906597 24.99992581 1.058109532 1.321136021 0.418817487 0.16547763 578.6705737 332816.881 0.076450245 0.051543154 4.96E-08 7.304906597 0.263026489 AYS(ph)TENYSLESQK ddPTM_A459_MK2206_30min_R2 3 AYSTENYSLESQK 13 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 AYS(0.996)T(0.004)ENYSLESQK;AYS(0.599)T(0.4)ENYSLES(0.001)QK;AYS(0.967)T(0.033)ENYSLESQK 211.82 5.33E-06 35103600 80619 142400 102164 97909 92245 87295 95509 93146 90144 67483 TRUE FALSE 86791.25263 135328.6231 105570.0968 89909.5215 88622.99781 90617.0724 82968.55357 105320.502 97984.56218 65281.03524 1.329501781 2.073015886 1.617163337 1.377268623 1.357561158 1.38810716 1.270944207 1.613339948 1.500965201 1 15.99437632 -5.657458081 4.316386473 1.381447892 1.731534158 0.288043058 0.225153436 0.249325498 8.194938692 0.059158818 0.105566793 2.20E-06 5.657458081 0.350086266 AYSFCGT(ph)VEYMAPEVVNR ddPTM_A459_MK2206_30min_R1 2 AYSFCGTVEYMAPEVVNR 18 0 B4DG22;B1AXG1;B7ZB17;P51812;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q9UK32-2;Q9UK32 B4DG22;E9PGT3;Q9UK32-2 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 1 AYS(0.208)FCGT(0.79)VEY(0.001)MAPEVVNR;AYS(0.128)FCGT(0.722)VEY(0.15)MAPEVVNR 190.82 2.24E-09 35113000 3050.8 3354.9 3034.6 2561.8 3072.5 2517.8 3393.6 2687.8 2585.8 2625.2 TRUE FALSE 2791.31344 3136.4954 2828.619807 2759.11028 2950.115819 2660.35566 3167.219136 2664.300848 2854.603163 2950.429595 0.946070174 1.063063971 0.958714559 0.935155438 0.999893651 0.90168417 1.07347728 0.903021327 0.967521194 1 11.52670932 AYSGS(ph)DLPSSSSGGANGTAGGGGGAR ddPTM_A459_MK2206_30min_R2 1 AYSGSDLPSSSSGGANGTAGGGGGAR 26 0 Q8NHG8 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 1 AYS(0.044)GS(0.948)DLPS(0.008)SSSGGANGTAGGGGGAR 241.38 4.13E-46 21105000 28401 36707 35098 49956 48168 61254 68378 54436 68513 60247 TRUE FALSE 30575.4024 34884.18376 36268.1498 45874.435 46276.6823 63585.06389 59399.88646 61550.97211 74472.1369 58281.14532 0.524619107 0.598550072 0.622296449 0.787123087 0.794024929 1.091005737 1.019195593 1.056104367 1.277808397 1 15.83074161 -6.329361267 0.820863776 1.125208422 0.533541696 0.879139387 0.08193163 0.200772751 0.29446056 0.043650241 0.067934446 4.68E-07 6.329361267 -0.591666726 AYSS(ph)PSTTPEAR ddPTM_A459_MK2206_30min_R1 2 AYSSPSTTPEAR 12 0 G3V2R1;Q9UPU9-2;Q9UPU9-3;Q9UPU9 G3V2R1 SAMD4A Protein Smaug homolog 1 1 AYS(0.019)S(0.878)PS(0.035)T(0.066)T(0.002)PEAR;AYS(0.067)S(0.925)PS(0.003)T(0.002)T(0.003)PEAR 193.62 0.0001568 57884000 12356.8 11744.7 11656.5 10322.7 11954.9 11507.6 12274.1 11278.4 10541.7 9218.8 TRUE FALSE 11305.78927 10980.1179 10865.28926 11117.75614 11478.71102 12159.15037 11455.31718 11179.79414 11637.54744 10360.89454 1.09119818 1.059765433 1.048682545 1.073049831 1.107888028 1.173561831 1.10563013 1.079037538 1.123218405 1 13.33886095 -3.100840768 8.243511736 1.089824935 1.313474009 0 0.044460677 0 0 0.010404844 0 0.000792792 3.100840768 0.223649074 AYSS(ph)PSTTPEAR ddPTM_A459_MK2206_30min_R2 2 AYSSPSTTPEAR 12 0 G3V2R1;Q9UPU9-2;Q9UPU9-3;Q9UPU9 G3V2R1 SAMD4A Protein Smaug homolog 1 1 AYS(0.045)S(0.955)PSTTPEAR;AYS(0.07)S(0.929)PST(0.001)TPEAR 153.34 0.00047159 45891000 85887 96487 88975 103641 107034 104209 105879 90768 96878 95129 TRUE FALSE 92462.57476 91695.59589 91941.38209 95173.19877 102831.3074 108174.7465 91976.96012 102631.6893 105304.2733 92024.94852 1.004755517 0.996421051 0.999091916 1.034210834 1.117428578 1.175493692 0.999478528 1.115259404 1.144301355 1 16.48973742 -6.066754356 3.756641156 1.0969541 1.001018498 0.380514391 0.053097309 0.237391841 6.544128928 0.015861434 0.021772346 8.58E-07 6.066754356 -0.095935601 AYSSFGGGRGS(ph)R ddPTM_A459_MK2206_30min_R1 1 AYSSFGGGRGSR 12 1 Q15056-2;Q15056 Q15056-2 EIF4H Eukaryotic translation initiation factor 4H 1 AYSSFGGGRGS(1)R 124.47 0.014452 10455000 4222.9 3552.2 4136.3 3675.1 4202.2 3156.3 3574.5 3755.7 2642.5 2171.8 TRUE FALSE 3863.72018 3320.951134 3855.53948 3958.156839 4034.817476 3335.006978 3336.051627 3722.864311 2917.197331 2440.85898 1.582934619 1.360566572 1.579583053 1.621624547 1.653031784 1.366325136 1.36675312 1.525227119 1.195151934 1 11.25317323 -8.551194601 0.722715472 0.991923785 1.536385442 0.71340635 0.106261019 0.444401996 0.524120695 0.109365572 0.042276257 2.81E-09 8.551194601 0.544461658 AYST(ph)ENYSLESQK ddPTM_A459_MK2206_30min_R2 1 AYSTENYSLESQK 13 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 AYS(0.333)T(0.665)ENYS(0.002)LESQK 111.07 0.012573 4982100 7924.8 17453 11815 14927 13008 11260 13217 11163 11502 9569.6 TRUE FALSE 8531.528781 16586.3094 12208.9062 13707.41635 12497.24056 11688.50719 11481.59202 12622.04243 12502.42317 9257.344736 0.921595665 1.791691881 1.318834563 1.48070713 1.349981114 1.262619847 1.240268387 1.363462503 1.350540952 1 13.17638273 -6.61157297 3.928875553 1.26619533 1.404873903 0.07027476 0.220166133 0.611306301 18.06348422 0.070808337 0.071098875 2.45E-07 6.61157297 0.138678574 AYT(ph)HQVVTR ddPTM_A459_MK2206_30min_R1 2 AYTHQVVTR 9 0 D6R9G1;D6RAD4;P50613;D6REC6 D6R9G1 CDK7 Cyclin-dependent kinase 7 1 AYT(1)HQVVTR;AYT(1)HQVVTR 116.74 0.018135 127797000 5588.9 5757 6848.2 5341.5 6662.7 5565.3 6131.5 5300.8 5601.2 3469.6 TRUE FALSE 5113.534707 5382.218254 6383.363264 5752.903256 6397.31055 5880.402477 5722.478823 5254.455664 6183.464784 3899.440242 1.31135096 1.380254067 1.636994765 1.475315147 1.640571506 1.508011948 1.467512891 1.347489726 1.585731387 1 11.92905133 -11.21309646 6.729707783 0.996003527 1.485760213 0.63996319 0.108829558 0.006712401 0.000308985 0.108389632 0.026173988 6.12E-12 11.21309646 0.489756686 AYT(ph)HQVVTR ddPTM_A459_MK2206_30min_R2 4 AYTHQVVTR 9 0 D6R9G1;D6RAD4;P50613;D6REC6 D6R9G1 CDK7 Cyclin-dependent kinase 7 1 AYT(0.994)HQVVT(0.006)R;AYT(1)HQVVTR;AY(0.001)T(0.982)HQVVT(0.017)R;AY(0.01)T(0.914)HQVVT(0.076)R 123.67 0.012986 267822000 114740 186414 201225 217591 203140 176170 149633 109389 141591 177753 TRUE FALSE 123524.5826 177156.9518 207933.7411 199813.1193 195163.7029 182874.2728 129986.0074 123686.5179 153906.3292 171952.9342 0.71836275 1.030264198 1.209247996 1.162022156 1.134983266 1.063513535 0.755939455 0.719304492 0.89504916 1 17.39165421 -7.251161257 23.54592848 0.819181986 1.067804545 0.329415129 0.14469263 335.8239798 769333.1831 0.058012725 0.044352162 5.61E-08 7.251161257 0.248622559 AYT(ph)PPPPLGPHPNLGK ddPTM_A459_MK2206_30min_R1 2 AYTPPPPLGPHPNLGK 16 0 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 AY(0.01)T(0.99)PPPPLGPHPNLGK;AY(0.021)T(0.979)PPPPLGPHPNLGK 106.87 0.0046348 79147000 10589.2 11765.5 11237.6 10374.4 10010.5 8926.5 10679.8 10756.7 10111.5 9338.9 TRUE FALSE 9688.532934 10999.56381 10474.82302 11173.43809 9611.760587 9431.910716 9967.370028 10662.65531 11162.62661 10495.87344 0.923080198 1.047989372 0.99799441 1.064555337 0.915765672 0.898630378 0.949646553 1.015890232 1.063525268 1 13.35753461 -7.932964918 5.965275558 1.034376232 0.973983598 0.185961477 0.053434222 0.354392093 22.92119688 0.032507548 0.015216639 1.17E-08 7.932964918 -0.060392634 AYT(ph)PPPPLGPHPNLGK ddPTM_A459_MK2206_30min_R2 2 AYTPPPPLGPHPNLGK 16 0 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 AY(0.057)T(0.943)PPPPLGPHPNLGK;AY(0.047)T(0.953)PPPPLGPHPNLGK 108.18 0.0043232 67961000 174385 205029 170332 186212 203900 162866 210054 165440 161573 203321 TRUE FALSE 187736.0497 194847.558 176010.7839 170997.8839 195893.8615 169063.9798 182473.6575 187063.576 175626.3275 196686.6524 0.954493085 0.990649623 0.894879148 0.869392416 0.995969269 0.859560004 0.927737878 0.951074075 0.892924483 1 17.58553953 -10.63701735 3.959299699 1.000021322 0.926450069 0.194857888 0.044943806 10896564.93 7318652.588 1930.128589 0.01074474 2.31E-11 10.63701735 -0.073571253 AYT(ph)PVVVTLWYR ddPTM_A459_MK2206_30min_R1 2 AYTPVVVTLWYR 12 0 P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;P21127-10;P21127-5;P21127-4;P21127-12 P21127 CDK11B Cyclin-dependent kinase 11B 1 AYT(1)PVVVTLWYR;AYT(0.997)PVVVT(0.002)LWYR 194.06 0.00037328 662300000 6942.8 7340.3 7281.5 5252.5 5462.3 5650.3 7400 5954.5 6683.4 7583.3 TRUE FALSE 6352.278402 6862.445136 6787.252067 5657.04846 5244.725024 5970.215103 6906.359502 5902.440434 7378.163347 8522.776455 0.745329698 0.805188916 0.796366314 0.663756522 0.615377518 0.700501196 0.810341505 0.692549014 0.865699504 1 13.05710778 -8.515191859 3.143726165 0.999533111 0.729504314 0.670196588 0.060844428 0.145957986 3.58125119 0.064723106 0.017214895 3.05E-09 8.515191859 -0.270028798 AYT(ph)PVVVTLWYR ddPTM_A459_MK2206_30min_R2 3 AYTPVVVTLWYR 12 0 P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;P21127-10;P21127-5;P21127-4;P21127-12 P21127 CDK11B Cyclin-dependent kinase 11B 1 AYT(1)PVVVTLWYR;AYT(1)PVVVTLWYR;AYT(0.998)PVVVT(0.002)LWYR 187.62 0.00024385 225146400 239513.6 237187.4 185202.2 219931.3 189861.7 165674.6 264523.5 225006.4 131359.2 217454.6 TRUE FALSE 257850.9454 225409.0186 191376.7489 201962.2093 182406.7757 171979.463 229791.2467 254415.509 142784.5858 210359.0742 1.225765736 1.07154407 0.90976227 0.960083182 0.867121023 0.81755191 1.092376203 1.20943444 0.678765992 1 17.68249453 -4.92109551 2.652235761 0.94852339 1.242957667 0.293743318 0.137974579 0.470142199 5.460818371 0.036412577 0.270725935 1.20E-05 4.92109551 0.294434277 AYT(ph)PVVVTQWYR ddPTM_A459_MK2206_30min_R1 2 AYTPVVVTQWYR 12 0 Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 Q5QPR4 CDK11A Cyclin-dependent kinase 11A 1 AYT(1)PVVVTQWYR;AYT(1)PVVVTQWYR 219.89 8.07E-08 168843000 4060.5 4171.9 4103.6 3162.8 3606.6 3282 4244 3197.3 4451.8 4515.3 TRUE FALSE 3715.133152 3900.308552 3825.059065 3406.399404 3462.941485 3467.824004 3960.890504 3169.346343 4914.580541 5074.689453 0.732090739 0.768580735 0.753752343 0.67125278 0.682394759 0.68335689 0.780518796 0.624539959 0.968449515 1 12.30910382 -8.277337461 22.56544051 0.984225215 0.714310589 0.845872486 0.046462644 92.00812311 130590.2176 0.043941522 0.011558374 5.28E-09 8.277337461 -0.269914626 AYT(ph)PVVVTQWYR ddPTM_A459_MK2206_30min_R2 2 AYTPVVVTQWYR 12 0 Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 Q5QPR4 CDK11A Cyclin-dependent kinase 11A 1 AY(0.001)T(0.999)PVVVTQWYR;AYT(0.998)PVVVT(0.002)QWYR 141.73 0.0022632 46909300 72640 68271 66901 66116 62037 52252 69843 51385 45079 64446 TRUE FALSE 78201.37425 64880.76142 69131.44595 60714.11131 59601.11567 54240.48647 60672.5302 58101.19593 48999.88994 62343.1323 1.254370311 1.040704229 1.10888631 0.973870081 0.956017343 0.870031461 0.973203109 0.931958241 0.785970934 1 15.92794302 -3.455708499 0.462518727 0.900848255 2.232752528 0.702373588 0.066319929 8.355690889 0.531123183 0.04051328 7.913557602 0.00035018 3.455708499 1.331904273 AYTNFDAER ddPTM_A459_MK2206_30min_R2 3 AYTNFDAER 9 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;; 178.55 0.011914 362263000 1199717 1395651 1193023 1586912 1252372 1507969 1449156 1109162 1398736 1506296 FALSE TRUE 1291568.256 1326345.001 1232797.791 1457256.213 1203197.583 1565355.817 1258880.076 1254133.282 1520395.529 1457145.685 0.886368652 0.910234999 0.846036058 1.000075853 0.825722229 1.074261711 0.863935631 0.860678033 1.043406671 1 20.47471369 -8.545100289 0.01451761 1.906597004 2.49E-07 0.146791913 0.078844529 1467.055156 13.73981876 919.022505 882.7192663 2.85E-09 8.545100289 -1.906596755 CAAPRPPSS(ph)SPEQR ddPTM_A459_MK2206_30min_R1 1 CAAPRPPSSSPEQR 14 1 E9PQP7;Q5H9R7-2;Q5H9R7;Q5H9R7-5;H0YEN2;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6 E9PQP7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 CAAPRPPS(0.029)S(0.894)S(0.077)PEQR 165.78 0.0011625 9349200 2056 2610.4 2511.4 2400.6 2518.2 2345.6 2740.5 2672 2181.5 2574.3 TRUE FALSE 1881.126404 2440.462486 2340.933165 2585.494628 2417.894762 2478.405845 2557.686245 2648.638986 2408.274732 2893.223719 0.650183528 0.843509774 0.809108936 0.89363799 0.835709574 0.856624335 0.884026433 0.915462903 0.832384553 1 11.49846217 -4.052230215 1.035751229 0.880103041 3.17E-30 0.651465095 0.050095835 4.27610409 1.254744971 0.014664822 5.99109097 8.87E-05 4.052230215 -0.880103041 CAAPRPPSSS(ph)PEQR ddPTM_A459_MK2206_30min_R1 1 CAAPRPPSSSPEQR 14 1 E9PQP7;Q5H9R7-2;Q5H9R7;Q5H9R7-5;H0YEN2;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6 E9PQP7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 CAAPRPPSS(0.003)S(0.997)PEQR 138.55 0.0027433 11027000 2192.2 1936.5 2118.3 1712.7 2225.9 1714.7 2215.6 1870.6 2088.2 1890.9 TRUE FALSE 2005.741878 1810.433498 1974.515698 1844.612451 2137.23769 1811.784832 2067.801367 1854.245541 2305.275863 2125.158968 0.943807926 0.851904975 0.929114352 0.867987985 1.005683679 0.85254085 0.973010207 0.872520865 1.084754551 1 11.05335505 -8.260753652 24.99989699 1.042377282 0.912331818 0.492108545 0.052951071 45.91910973 1674267.17 0.037511375 0.012220752 5.49E-09 8.260753652 -0.130045464 CADTRPGSEQPPLGGAAS(ph)PEVLAPVSK ddPTM_A459_MK2206_30min_R1 1 CADTRPGSEQPPLGGAASPEVLAPVSK 27 1 Q96RY5 Q96RY5 CRAMP1L Protein cramped-like 1 CADTRPGSEQPPLGGAAS(0.999)PEVLAPVS(0.001)K 104.38 2.10E-08 3830000 1098.9 1071.5 1369.1 1074.2 1045.5 1158.6 1006 1278.1 957.38 906.76 TRUE FALSE 1005.432784 1001.745155 1276.169307 1156.93507 1003.855521 1224.198931 938.8915756 1266.925706 1056.903077 1019.096274 0.986592542 0.982974014 1.252255884 1.135255912 0.985044835 1.201259352 0.921298212 1.243185495 1.037098362 1 9.993074635 -5.109567218 19.91537423 1.101587598 0.984538519 0.148462074 0.1069551 8.436841549 1513.288691 0.025597291 0.067725147 7.77E-06 5.109567218 -0.117049079 CADTRPGSEQPPLGGAAS(ph)PEVLAPVSK ddPTM_A459_MK2206_30min_R2 1 CADTRPGSEQPPLGGAASPEVLAPVSK 27 1 Q96RY5 Q96RY5 CRAMP1L Protein cramped-like 1 CADTRPGSEQPPLGGAAS(0.998)PEVLAPVS(0.002)K 78.206 6.62E-05 6488600 34686 36308 38339 38498 38758 35304 42108 25840 35392 39094 TRUE FALSE 37341.58683 34504.99752 39617.20312 35352.59025 37236.16618 36647.51846 36579.16902 29217.37672 38470.33219 37818.36598 0.98739292 0.912387318 1.047565174 0.934799517 0.984605369 0.96904024 0.967232932 0.772571103 1.017239407 1 15.20679941 -7.566513129 24.99987436 0.910923623 0.971792324 0.050464415 0.070308705 266.763487 152836.5524 0.030612826 0.017674315 2.71E-08 7.566513129 0.060868701 CALSS(ph)PSLAFTPPIK ddPTM_A459_MK2206_30min_R1 1 CALSSPSLAFTPPIK 15 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 CALS(0.159)S(0.586)PS(0.157)LAFT(0.099)PPIK 130.19 0.00081881 8990200 5274.2 4863.5 5605.3 4435.4 4619.7 4092 4996.6 4743.5 4237.3 4004.4 TRUE FALSE 4825.601594 4546.885266 5224.827853 4777.015277 4435.687567 4323.685504 4663.285931 4702.02808 4677.782498 4500.495304 1.072237891 1.010307746 1.160945074 1.06144212 0.985599866 0.960713258 1.036171714 1.044780132 1.039392818 1 12.13586807 -6.089642568 6.246197068 1.012548366 1.07987225 0.374935132 0.041693975 0.275103853 15.74528521 0.012981185 0.016930266 8.13E-07 6.089642568 0.067323884 CALSS(ph)PSLAFTPPIK ddPTM_A459_MK2206_30min_R2 1 CALSSPSLAFTPPIK 15 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 CALS(0.13)S(0.749)PS(0.121)LAFTPPIK 105.95 0.0046049 13284000 73377 81340 76152 95154 86403 82181 78257 60951 70625 89891 TRUE FALSE 78994.79954 77300.77388 78690.86967 87379.61382 83010.38408 85308.45554 67981.7619 68917.50498 76767.83484 86957.86403 0.908426172 0.888945178 0.904931032 1.004850048 0.954604681 0.981032095 0.781778194 0.792539073 0.882816473 1 16.40802888 -7.252131458 24.89708339 0.846995023 0.940077207 0.229078867 0.065458222 767.8373296 2053835.602 0.02527392 0.019308202 5.60E-08 7.252131458 0.093082184 CALSSPS(ph)LAFTPPIK ddPTM_A459_MK2206_30min_R2 1 CALSSPSLAFTPPIK 15 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 CALS(0.019)S(0.377)PS(0.604)LAFTPPIK 195.1 3.32E-05 13887000 20325 23571 18499 21877 20758 17532 20144 16340 16654 21536 TRUE FALSE 21881.09763 22400.49842 19115.74743 20089.57912 19942.93662 18199.19255 17499.0686 18475.6941 18102.53482 20833.28208 1.05029527 1.075226569 0.917558134 0.96430217 0.957263313 0.873563391 0.839957359 0.886835499 0.868923809 1 14.34660252 -5.284773718 0.781331262 0.889218168 1.115522333 0.564757079 0.050082578 1.001025992 0.751102451 0.021119664 0.17459647 5.19E-06 5.284773718 0.226304166 CALSSPSLAFT(ph)PPIK ddPTM_A459_MK2206_30min_R1 1 CALSSPSLAFTPPIK 15 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 CALSSPS(0.003)LAFT(0.997)PPIK 161.49 0.00028046 14138000 8002.1 8406.2 7785.9 6488.5 7243.8 6905.8 8193.6 7622.1 8058.2 6989.4 TRUE FALSE 7321.479374 7858.954852 7257.414801 6988.245394 6955.264107 7296.800428 7647.019894 7555.460783 8895.878727 7855.299639 0.932043297 1.000465318 0.923887711 0.889621748 0.885423144 0.928901603 0.973485449 0.961829737 1.132468414 1 12.93945059 -8.09472171 5.148941156 1.065265679 0.934009094 0.585661565 0.043967686 0.159302354 6.559959927 0.0320253 0.011680001 8.04E-09 8.09472171 -0.131256585 CALSSPSLAFT(ph)PPIK ddPTM_A459_MK2206_30min_R2 1 CALSSPSLAFTPPIK 15 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 CALSSPSLAFT(1)PPIK 104.41 0.011747 11393000 23687 23248 24565 23639 28161 21976 25246 20733 21038 25349 TRUE FALSE 25500.49493 22093.53813 25383.98484 21707.61808 27055.25764 22812.31208 21931.16987 23442.87429 22867.84721 24521.86421 1.039908496 0.900973023 1.035157222 0.885235229 1.103311617 0.930284577 0.894351657 0.955998862 0.932549296 1 14.58178104 CAPPS(ph)PPPPVEPATQEEAER ddPTM_A459_MK2206_30min_R2 1 CAPPSPPPPVEPATQEEAER 20 0 Q6IQ19;Q6IQ19-3;Q6IQ19-4 Q6IQ19 CCSAP "Centriole, cilia and spindle-associated protein" 1 CAPPS(1)PPPPVEPATQEEAER 111.73 0.00093973 0 7303.9 6652.5 6204.3 9332.1 6161.2 6286.3 8695.5 4229.1 6775.1 7161.4 TRUE FALSE 7863.0922 6322.146524 6411.148265 8569.637578 5919.28033 6525.529552 7553.770405 4781.857891 7364.385951 6927.724104 1.135018093 0.91258636 0.925433543 1.237006187 0.854433612 0.941944202 1.090368249 0.69024947 1.063031068 1 12.75816576 CAPS(ph)AGSPAAAVGR ddPTM_A459_MK2206_30min_R2 1 CAPSAGSPAAAVGR 14 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 CAPS(0.651)AGS(0.349)PAAAVGR 87.863 0.021519 55634000 12743 18615 15816 14354 19581 21255 15367 13752 13628 16468 TRUE FALSE 13718.61388 17690.60617 16343.29755 13181.23228 18812.15155 22063.87392 13349.29444 15549.43362 14813.33881 15930.65051 0.861145869 1.11047607 1.025902711 0.827413311 1.180877802 1.384995164 0.837962921 0.976070224 0.929864025 1 13.95951756 CAPSAGS(ph)PAAAVGR ddPTM_A459_MK2206_30min_R1 1 CAPSAGSPAAAVGR 14 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 CAPS(0.012)AGS(0.988)PAAAVGR 134.4 0.00064787 36190000 853.72 953.88 988.44 699.73 838.87 1013.5 1150 994.9 978.44 1009.5 TRUE FALSE 781.1066309 891.7822386 921.3474468 753.6233258 805.4560316 1070.883494 1073.285598 986.2016942 1080.152339 1134.564481 0.68846385 0.78601283 0.812071471 0.664240189 0.709925302 0.943871866 0.94598907 0.869233711 0.952041384 1 10.14792289 -6.76429831 24.99999775 0.934289459 0.735803621 0.811964953 0.050461658 34.53176021 301961.3609 0.0180131 0.016585268 1.72E-07 6.76429831 -0.198485839 CAPSAGS(ph)PAAAVGR ddPTM_A459_MK2206_30min_R2 1 CAPSAGSPAAAVGR 14 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 CAPS(0.171)AGS(0.829)PAAAVGR 73.877 0.04771 48017000 13732 14107 12652 14676 16650 20250 13777 13019 15151 15330 TRUE FALSE 14783.33248 13406.46689 13073.81137 13476.92385 15996.23734 21020.62794 11968.06335 14720.628 16468.80659 14829.78336 0.996867731 0.904023112 0.881591528 0.908774156 1.078656172 1.417460217 0.807028873 0.99263945 1.110522399 1 13.8562099 -6.262096361 24.99999545 1.071802498 0.91852744 0.192722152 0.145037888 104.0844316 3960704.133 0.045658939 0.054981915 5.47E-07 6.262096361 -0.153275058 CAPSAGS(ph)PAAAVGRES(ph)PGAAATSSSGPQAQQHR ddPTM_A459_MK2206_30min_R2 2 CAPSAGSPAAAVGRESPGAAATSSSGPQAQQHR 33 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 2 CAPS(0.106)AGS(0.894)PAAAVGRES(0.995)PGAAAT(0.004)S(0.001)SSGPQAQQHR;CAPS(0.04)AGS(0.96)PAAAVGRES(0.999)PGAAATSSSGPQAQQHR 79.873 4.51E-06 21751300 9921.2 25331.9 15365.6 25172 25220 30961 18999.2 20447.8 20227.4 15715 TRUE FALSE 10680.7747 24073.95468 15877.88143 23115.36708 24229.73608 32139.24255 16504.58222 23120.39767 21986.74269 15202.22084 0.702579894 1.583581435 1.044444861 1.520525674 1.593828714 2.114114964 1.085669153 1.520856585 1.446284916 1 13.89199448 -5.771789622 24.5141413 1.506596296 1.157540008 0.172374301 0.348688018 275.8589076 653361.697 0.095522928 0.143514888 1.69E-06 5.771789622 -0.349056288 CAPSAGSPAAAVGRES(ph)PGAAATSSSGPQAQQHR ddPTM_A459_MK2206_30min_R2 2 CAPSAGSPAAAVGRESPGAAATSSSGPQAQQHR 33 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 CAPSAGSPAAAVGRES(0.999)PGAAAT(0.001)SSSGPQAQQHR;CAPSAGSPAAAVGRES(1)PGAAATSSSGPQAQQHR 137.28 9.61E-26 12079900 19057.2 20766.7 19733 24355 25284 26752 23200 14659.4 21967 20948.9 TRUE FALSE 20516.23388 19735.45588 20390.88837 22365.11859 24291.22312 27770.06611 20153.81213 16575.43391 23877.64995 20265.33911 1.012380487 0.973852733 1.006195271 1.103614328 1.198658606 1.370323287 0.994496664 0.817920382 1.178250698 1 14.3067267 -7.486701299 24.99916415 0.980092772 1.110092288 0.141340804 0.134339971 1114.80823 770351.3113 0.060342097 0.040666448 3.26E-08 7.486701299 0.129999516 CCS(ph)PPNELGFR ddPTM_A459_MK2206_30min_R2 2 CCSPPNELGFR 11 0 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 CCS(1)PPNELGFR;CCS(1)PPNELGFR 100.02 0.016677 7826000 50627 69334 53844 64977 66468 57368 68888 61458 51700 62272 TRUE FALSE 54503.04205 65890.97438 55639.13209 59668.17125 63858.13235 59551.17944 59842.92285 69490.77162 56196.77255 60240.06974 0.904763927 1.093806409 0.923623301 0.990506344 1.060060731 0.988564251 0.993407264 1.15356393 0.93288027 1 15.87843582 -6.025696041 22.62579318 1.025978741 0.981209773 0.079494391 0.071470763 594.4272413 523403.9955 0.020059644 0.026039544 9.43E-07 6.025696041 -0.044768968 CCSGAIIVLT(ph)K ddPTM_A459_MK2206_30min_R1 2 CCSGAIIVLTK 11 0 P14618;P14618-3;B4DNK4 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 1 CCSGAIIVLT(1)K;CCSGAIIVLT(1)K 142.91 0.0020645 30453000 3432.9 4578.3 4513.2 3949.1 3326.8 3023.2 3697.8 3718.7 4005.8 3609.7 TRUE FALSE 3140.913828 4280.251838 4206.856558 4253.260366 3194.286511 3194.370971 3451.126509 3686.187798 4422.217245 4056.896888 0.774215839 1.055055614 1.036964132 1.048402383 0.787371876 0.787392694 0.850681347 0.908622501 1.090049209 1 11.98616092 -1.52406779 24.9952092 0.930298816 0.000448429 0 0.11970364 0 0 0.028856779 0 0.029917976 1.52406779 -0.929850387 CCSGAIIVLT(ph)K ddPTM_A459_MK2206_30min_R2 2 CCSGAIIVLTK 11 0 P14618;P14618-3;B4DNK4 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 1 CCSGAIIVLT(1)K;CCSGAIIVLT(1)K 123.95 0.0086868 14904600 63804 67529 73806 59412 61710 51961 74473 53465 57915 74846 TRUE FALSE 68688.8833 64175.60806 76266.6552 54557.84955 59286.95533 53938.41227 64694.60564 60453.05907 62952.34201 72403.78115 0.948691936 0.886357135 1.053351828 0.753522105 0.818837834 0.744966788 0.893525236 0.834943398 0.869462078 1 16.14377742 -5.766325565 24.99998092 0.834918573 0.95515598 0.315419533 0.078276886 133.6116876 683623.0391 0.021045356 0.032372044 1.71E-06 5.766325565 0.120237407 CCSSDTKGS(ph)PLASISK ddPTM_A459_MK2206_30min_R2 1 CCSSDTKGSPLASISK 16 1 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 NSD1 "Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific" 1 CCS(0.004)S(0.006)DT(0.018)KGS(0.767)PLAS(0.2)IS(0.005)K 58.671 0.043713 5670800 26977 29038 25039 29342 33381 21500 36670 21968 21308 41801 TRUE FALSE 29042.37986 27596.01515 25873.78776 26944.66474 32070.29421 22318.19757 31855.18495 24839.29303 23161.33132 40437.03679 0.718212366 0.68244405 0.639853704 0.666336282 0.793092095 0.551924655 0.787772485 0.614270852 0.572775187 1 15.30338966 -10.88053003 3.307062261 1.002459868 0.671051151 0.624944125 0.076772809 28233412.52 38567490.95 671895.0685 0.018397587 1.32E-11 10.88053003 -0.331408717 CDENILWLDYK ddPTM_A459_MK2206_30min_R1 1 CDENILWLDYK 11 0 P14618;P14618-3;B4DNK4;H3BQ34;H3BUW1;H3BTJ2;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 176.8 0.00094653 24195000 2291.5 1928.5 2357.1 1567.7 2047.2 1587.2 2024.6 1687.7 1681.8 1883.9 FALSE TRUE 2096.595892 1802.954299 2197.106619 1688.444526 1965.655689 1677.065892 1889.542628 1672.944617 1856.629128 2117.291755 0.990225314 0.851537959 1.037696678 0.797454825 0.928382064 0.79208068 0.892433754 0.790134195 0.876888659 1 11.04800437 -5.772023451 24.99999566 0.85979806 0.948991797 0.22410438 0.076229223 286.4960032 676715.0457 0.019724518 0.02960078 1.69E-06 5.772023451 0.089193737 CDENILWLDYK ddPTM_A459_MK2206_30min_R2 2 CDENILWLDYK 11 0 P14618;P14618-3;B4DNK4;H3BQ34;H3BUW1;H3BTJ2;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 168.94 0.0062355 21054500 83763 100476 89026 85158 92266 86587 96325 66247 86869 92822 FALSE TRUE 90175.95968 95486.50795 91994.08241 78200.31899 88643.17324 89882.12896 83677.41179 74905.71036 94424.7086 89793.22574 1.004262392 1.063404362 1.024510275 0.870893303 0.987192213 1.000990088 0.93189003 0.834202243 1.051579424 1 16.45431899 -5.556203638 24.09031669 0.949227621 1.036364392 0.241893197 0.062131942 151.3160055 109384.3582 0.016512371 0.028600506 2.78E-06 5.556203638 0.087136771 CDGDASPPS(ph)PAR ddPTM_A459_MK2206_30min_R1 2 CDGDASPPSPAR 12 0 E7EUV9;F8W8D3;Q14493 E7EUV9 SLBP Histone RNA hairpin-binding protein 1 CDGDASPPS(1)PAR;CDGDASPPS(1)PAR 150.9 0.00053682 34397000 9982.3 10994.2 10229.7 9647.7 9955.7 9939.2 9900.5 9093.4 8259.2 8755.1 TRUE FALSE 9133.252966 10278.47558 9535.336466 10390.76753 9559.143387 10501.94891 9240.055709 9013.897363 9117.773396 9839.747886 0.928199896 1.04458729 0.969063087 1.055999366 0.971482552 1.067298577 0.939054112 0.916069951 0.926626729 1 13.26440564 -7.357730837 13.00483743 0.938362296 1.006860174 0.293309545 0.045598835 1.137380586 150.5888414 0.017674583 0.011913497 4.39E-08 7.357730837 0.068497878 CDILVQEELLAS(ph)PK ddPTM_A459_MK2206_30min_R1 5 CDILVQEELLASPK 14 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK 211.49 3.54E-06 57310600 19836.7 27343.6 28085.6 18884.6 11484.64 12626.16 18751.8 17251.8 28698.9 31214.2 TRUE FALSE 18149.4845 25563.52667 26179.22772 20339.09516 11027.18247 13341.04227 17500.90164 17100.96933 31682.25336 35081.25075 0.517355685 0.728694848 0.746245563 0.579771095 0.314332649 0.380289812 0.498867665 0.487467492 0.903110712 1 15.09841256 -8.343351303 4.244996624 0.988590998 0.533366847 0.636325725 0.127556626 0.164643029 5.168552391 0.140481415 0.037396112 4.54E-09 8.343351303 -0.455224151 CDILVQEELLAS(ph)PK ddPTM_A459_MK2206_30min_R2 4 CDILVQEELLASPK 14 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK 176.29 6.91E-05 25727700 216359 153961 200746 134469 144166 89290 196372 146838 105943 207187 TRUE FALSE 232923.6114 146315.5206 207438.7714 123482.4526 138505.3185 92687.99352 170588.1205 166030.2308 115157.7306 200426.5052 1.162139764 0.730020815 1.034986721 0.616098417 0.691052904 0.462453773 0.851125555 0.828384602 0.574563382 1 17.61271378 -5.760820386 24.9998817 0.704335524 0.951146289 0.307449509 0.175529715 20.37817139 822954.5209 0.04681887 0.075262851 1.73E-06 5.760820386 0.246810764 CDILVQEELLAS(ph)PKK ddPTM_A459_MK2206_30min_R1 1 CDILVQEELLASPKK 15 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 CDILVQEELLAS(1)PKK 81.016 0.014418 8400600 2330.1 2533.3 2729.8 2166.3 1651.8 1590.1 2188.9 1907.6 2434.9 2953.1 TRUE FALSE 2131.912759 2368.38171 2544.508782 2333.148801 1586.005308 1680.130088 2042.882475 1890.922054 2688.016568 3318.952323 0.642345099 0.71359317 0.766660239 0.702977498 0.477863239 0.506223026 0.615520284 0.569734624 0.809899121 1 11.69651219 -8.520633518 3.467093973 0.999112425 0.626340003 0.659644581 0.085985624 0.142713741 4.526968244 0.095086189 0.025115965 3.02E-09 8.520633518 -0.372772422 CDILVQEELLAS(ph)PKK ddPTM_A459_MK2206_30min_R2 1 CDILVQEELLASPKK 15 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 CDILVQEELLAS(1)PKK 61.276 0.041277 4917000 31979 23591 26305 18981 19415 12509 29799 18403 14781 27141 TRUE FALSE 34427.33683 22419.50524 27181.99557 17430.19158 18652.66955 12985.03876 25886.3555 20808.33529 16066.62466 26255.39139 1.311248281 0.853901011 1.035291958 0.663870948 0.710431974 0.494566566 0.985944377 0.792535711 0.611936209 1 14.68032608 -1.522879436 0.852240868 0.751613748 197.5533944 0.474858137 0.166570867 582.0119625 1.594742893 0.056493403 222114.3429 0.029999952 1.522879436 196.8017806 CDKAFHS(ph)SSSYHR ddPTM_A459_MK2206_30min_R1 1 CDKAFHSSSSYHR 13 1 K7EQV7;A0A087WVH9;Q9H0M5 K7EQV7 ZNF700 Zinc finger protein 700 1 CDKAFHS(0.874)S(0.126)SSYHR 116.79 0.017767 15888000 3770.2 1658.8 3081.7 2302.4 4460.9 4114.2 4434.2 3464.2 896.14 1491.8 TRUE FALSE 3449.524692 1550.811818 2872.52279 2479.731247 4283.212907 4347.142449 4138.402609 3433.912865 989.2969599 1676.615447 2.057433444 0.924965723 1.713286607 1.47901014 2.554678186 2.592808302 2.468307576 2.04812193 0.590055974 1 10.71133611 CDSLLHFTENLFPS(ph)PNKK ddPTM_A459_MK2206_30min_R1 2 CDSLLHFTENLFPSPNKK 18 1 E5RFE4;Q56NI9;E5RFP7;E5RIE3 E5RFE4 ESCO2 N-acetyltransferase ESCO2 1 CDSLLHFTENLFPS(1)PNKK;CDSLLHFTENLFPS(1)PNKK 106.82 0.0011229 15303700 9249.1 6555.5 7974.5 5719.9 9070.8 8330.5 8866.9 8822.2 6665.8 6637.7 TRUE FALSE 8462.415476 6128.735758 7433.213158 6160.447689 8709.490828 8802.165711 8275.40528 8745.068436 7358.733764 7460.028388 1.134367731 0.821543222 0.996405479 0.825794135 1.167487625 1.179910485 1.109299435 1.172256724 0.986421684 1 12.86496541 -6.274142069 24.9750043 1.115379728 0.939448596 0.35239883 0.103995509 741.3988565 1457675.73 0.030470558 0.034777902 5.32E-07 6.274142069 -0.175931132 CDSRASTVSPGGY(ph)MVPK ddPTM_A459_MK2206_30min_R1 1 CDSRASTVSPGGYMVPK 17 1 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 CDSRAS(0.001)T(0.001)VS(0.003)PGGY(0.996)MVPK 58.159 0.044096 0 1854.5 2605.2 2279 2247 1583.8 1489.7 1521 1769.8 1892.3 2210.5 TRUE FALSE 1696.765037 2435.601006 2124.30783 2420.064329 1520.713892 1574.045527 1419.536865 1754.326825 2089.011357 2484.353428 0.682980536 0.980376213 0.855074727 0.974122402 0.612116567 0.633583575 0.571390869 0.706150262 0.840867218 1 11.27865471 -6.262710632 24.99802005 0.700172509 0.879508041 0.190802489 0.140301902 152.9625021 3007866.457 0.041512476 0.049702979 5.46E-07 6.262710632 0.179335532 CEFQDAYVLLSEK ddPTM_A459_MK2206_30min_R1 2 CEFQDAYVLLSEK 13 0 P10809 P10809 HSPD1 "60 kDa heat shock protein, mitochondrial" 0 ; 216.84 2.72E-07 16773800 4622.5 4725.2 3996.4 4568.7 4689.5 5073 4832.6 4934.2 3738.1 4047.2 FALSE TRUE 4229.332101 4417.588621 3725.135503 4920.582066 4502.707285 5360.228876 4510.226072 4891.06081 4126.688872 4548.597691 0.929810106 0.971197921 0.818963504 1.081780012 0.989911087 1.178435474 0.991564077 1.075289824 0.9072442 1 12.15120612 -5.776260848 24.99999783 1.037828109 0.913111225 0.35803262 0.076512649 241.3573926 407107.2699 0.020807396 0.031005999 1.67E-06 5.776260848 -0.124716884 CENTPLIGRES(ph)PPPSYTSSMR ddPTM_A459_MK2206_30min_R1 1 CENTPLIGRESPPPSYTSSMR 21 1 Q9C0H2-3;Q9C0H2-2;Q9C0H2 Q9C0H2-3 TTYH3 Protein tweety homolog 3 1 CENT(0.001)PLIGRES(0.998)PPPSYTSSMR 78.225 0.001344 13169000 1483.2 1865.4 1502.2 1551.1 1874.7 1417 1843.1 1838.8 2107.6 1867.4 TRUE FALSE 1357.046051 1743.962121 1400.234849 1670.565991 1800.026729 1497.229315 1720.150162 1822.723565 2326.692562 2098.74761 0.646598021 0.830953714 0.667176388 0.795982319 0.857667078 0.713391791 0.819607919 0.868481544 1.108609988 1 11.03531297 -8.008407741 2.340632801 1.053322429 0.761716495 0.724554687 0.071147522 0.155730522 1.587236077 0.055027357 0.018760377 9.81E-09 8.008407741 -0.291605935 CENTPLIGRES(ph)PPPSYTSSMR ddPTM_A459_MK2206_30min_R2 2 CENTPLIGRESPPPSYTSSMR 21 1 Q9C0H2-3;Q9C0H2-2;Q9C0H2 Q9C0H2-3 TTYH3 Protein tweety homolog 3 1 CENT(0.002)PLIGRES(0.891)PPPS(0.039)Y(0.005)T(0.015)S(0.015)S(0.032)MR;CENT(0.001)PLIGRES(0.89)PPPS(0.018)Y(0.021)T(0.023)S(0.013)S(0.034)MR 51.524 0.029085 21586000 20457.1 28569 29588 32424 32268 28665 33752 25112.8 32050 32921 TRUE FALSE 22023.3113 27150.305 30574.44915 29774.85548 31000.99619 29755.86666 29320.32186 28395.12919 34837.65107 31846.79047 0.691539429 0.852528767 0.960048052 0.93494054 0.973441773 0.934344285 0.920668031 0.891616667 1.093914035 1 14.95886036 -4.786502089 1.777899422 0.957943541 0.601634325 0.720422423 0.052558552 0.463596566 1.508177503 0.014002858 0.281710014 1.63E-05 4.786502089 -0.356309216 CEQDRPSPTTAPPAPPSPS(ph)PSPVPK ddPTM_A459_MK2206_30min_R2 1 CEQDRPSPTTAPPAPPSPSPSPVPK 25 1 P11279-2;P11279 P11279-2 LAMP1 Lysosome-associated membrane glycoprotein 1 1 CEQDRPSPTTAPPAPPS(0.043)PS(0.478)PS(0.478)PVPK 59.918 0.0041337 5283300 19945 17081 16967 19098 21030 14930 22020 16702 16094 22593 TRUE FALSE 21472.00454 16232.78238 17532.67131 17537.63231 20204.25653 15498.17161 19128.74755 18885.00875 17493.82703 21855.79226 0.982439999 0.742722212 0.80219793 0.802424918 0.924434873 0.709110492 0.875225538 0.864073401 0.800420631 1 14.41572806 -11.34116357 2.48929468 1.059869896 0.830274685 0.292459976 0.077449812 25904370.75 16423096.67 9303748.66 0.018628691 4.56E-12 11.34116357 -0.22959521 CFAS(ph)LADRFTR ddPTM_A459_MK2206_30min_R1 3 CFASLADRFTR 11 1 A0A087X2H1;Q9ULT8;G3V4V5;A0A087WVU6 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 CFAS(0.999)LADRFT(0.001)R;CFAS(0.999)LADRFT(0.001)R;CFAS(1)LADRFTR 90.827 0.015002 17228700 7473.8 1938.27 1783.25 1608.36 20620.9 20403.1 20714.7 5946.3 2355.32 2597.08 TRUE FALSE 6838.114064 1812.088271 1662.207958 1732.236166 19799.52589 21558.30589 19332.86016 5894.312126 2600.163943 2918.825877 2.342761902 0.620827808 0.569478286 0.593470196 6.783387129 7.385951337 6.623505811 2.019412042 0.890825302 1 11.51117243 -6.239300708 24.78925312 4.456905771 0.96927959 0.300243258 2.2716389 903.9776011 1012207.277 0.730149844 0.941831893 5.76E-07 6.239300708 -3.487626181 CGEEGHLS(ph)PYCR ddPTM_A459_MK2206_30min_R2 1 CGEEGHLSPYCR 12 0 Q9NUD5-2;Q9NUD5 Q9NUD5-2 ZCCHC3 Zinc finger CCHC domain-containing protein 3 1 CGEEGHLS(0.999)PY(0.001)CR 88.507 0.017896 4363300 32941 28449 32585 36147 32748 30773 39634 26589 23804 35832 TRUE FALSE 35462.98829 27036.26403 33671.36764 33193.67447 31462.14897 31944.08808 34430.00819 30064.27359 25874.42889 34662.80477 1.023084788 0.779979122 0.971397665 0.95761652 0.907663104 0.921566742 0.993283966 0.867335283 0.746460913 1 15.08110078 -7.972575007 21.59500228 0.851119751 0.930807942 0.097843263 0.08442376 82.13398676 64673.22542 0.043438373 0.020864867 1.07E-08 7.972575007 0.07968819 CGENT(ph)SPVLDAVLK ddPTM_A459_MK2206_30min_R2 1 CGENTSPVLDAVLK 14 0 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 CGENT(0.5)S(0.5)PVLDAVLK 101.53 0.019239 2070800 15331 14487 13254 17158 16961 14706 20594 15037 17056 16497 TRUE FALSE 16504.75315 13767.59665 13695.88174 15756.13651 16295.02592 15265.64713 17889.98306 17002.38753 18539.50005 15958.70424 1.034216369 0.86270141 0.85820763 0.987306756 1.021074498 0.956571843 1.12101727 1.065398999 1.161717128 1 13.9620559 -6.769857771 1.042036529 1.09288716 0.921307283 0.461958357 0.068506894 0.427465041 0.991643591 0.038096937 0.034263737 1.70E-07 6.769857771 -0.171579877 CGENTS(ph)PVLDAVLK ddPTM_A459_MK2206_30min_R2 1 CGENTSPVLDAVLK 14 0 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 CGENT(0.092)S(0.908)PVLDAVLK 135.47 0.00060308 2079500 17200 17543 18776 17380 21042 14320 21455 15085 16604 19164 TRUE FALSE 18516.84522 16671.84013 19401.98247 15959.9984 20215.78535 14864.95763 18637.93273 17056.66129 18048.18591 18538.68025 0.998822191 0.899300269 1.04656762 0.86090262 1.090465183 0.801834728 1.005353805 0.920058012 0.973542111 1 14.17825092 -8.527104941 21.66924259 1.000000013 0.95212305 0.031141213 0.08234003 283.2516541 1452355.243 0.071379288 0.018430053 2.97E-09 8.527104941 -0.047876963 CGESGHLAR ddPTM_A459_MK2206_30min_R2 2 CGESGHLAR 9 0 P62633-2;P62633;P62633-7;P62633-3;P62633-5;P62633-6;P62633-8;P62633-4 P62633-2;P62633-8 CNBP Cellular nucleic acid-binding protein 0 ; 131.11 0.0051749 6939100 35637 49553 39699 51783 57364 48689 55166 48782 59007 47258 FALSE TRUE 38365.39612 47092.27008 41022.54485 47552.16325 55111.60113 50541.89401 47922.63793 55157.97489 64139.3222 45715.97533 0.839212023 1.030105335 0.897335003 1.040165126 1.205521718 1.10556307 1.04826896 1.206536107 1.402995818 1 15.48041078 -6.019460035 3.58959928 1.162679535 0.934087007 0.480278031 0.111571456 0.213647658 5.868227771 0.033820327 0.048331873 9.56E-07 6.019460035 -0.228592528 CGGVEQASSS(ph)PR ddPTM_A459_MK2206_30min_R1 3 CGGVEQASSSPR 12 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 CGGVEQASS(0.028)S(0.972)PR;CGGVEQASS(0.029)S(0.971)PR;CGGVEQASS(0.002)S(0.998)PR 185.2 0.00010451 43533900 12244.6 12138.9 13035.6 10187 11474.1 10622.9 12557.5 12144.2 11864 11422.6 TRUE FALSE 11203.13247 11348.6554 12150.77979 10971.60451 11017.0623 11224.35942 11719.81209 12038.02454 13097.30526 12837.71792 0.872673207 0.884008783 0.946490635 0.854638229 0.858179185 0.87432669 0.912920206 0.937707512 1.020220676 1 13.64810115 -7.973887475 1.85357884 1.011461783 0.883475369 0.788304743 0.025648046 0.167268993 1.04868962 0.022786122 0.007727622 1.06E-08 7.973887475 -0.127986414 CGGVEQASSS(ph)PR ddPTM_A459_MK2206_30min_R2 3 CGGVEQASSSPR 12 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 CGGVEQAS(0.001)S(0.022)S(0.977)PR;CGGVEQAS(0.026)S(0.147)S(0.827)PR;CGGVEQASSS(1)PR 155.39 0.00042549 91666000 88649 93299 88029 87813 96868 85818 103012 69918 78100 87546 TRUE FALSE 95436.0356 88665.90733 90963.84292 80638.397 93064.4756 89083.86413 89486.40066 79056.52266 84892.99683 84689.38119 1.126894945 1.046954247 1.074087939 0.952166563 1.098891907 1.051889421 1.056642514 0.933488019 1.002404264 1 16.36989347 -7.741224847 24.78967371 0.975959617 1.055637434 0.384695434 0.046007368 213.0192377 261232.3661 0.021300459 0.012277464 1.81E-08 7.741224847 0.079677817 CGLGQENS(ph)DNEHLVENEVSLLLEESDLR ddPTM_A459_MK2206_30min_R1 1 CGLGQENSDNEHLVENEVSLLLEESDLR 28 0 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 CGLGQENS(1)DNEHLVENEVSLLLEESDLR 71.891 0.00021775 2400400 476.9 295.7 427.79 335.94 422.82 354.13 595.79 430.44 536.8 443.35 TRUE FALSE 436.3371507 276.4498763 398.7528067 361.814157 405.9781841 374.1805346 556.0459362 426.6767085 592.602281 498.2755451 0.875694493 0.554813253 0.800265657 0.72613268 0.814766424 0.750951031 1.115940651 0.856306742 1.189306372 1 8.960799959 -7.249492502 24.25733568 1.028413999 0.748356732 0.610604396 0.111917358 329.0786376 668173.1088 0.040333179 0.030980842 5.63E-08 7.249492502 -0.280057267 CGS(ph)PSDSSTTEEMEVAVSK ddPTM_A459_MK2206_30min_R1 2 CGSPSDSSTTEEMEVAVSK 19 0 P31751-2;P31751;M0R0P9;M0R275;M0QZK3;J3QLS6;C9JHS6;J3QKW1 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 CGS(0.95)PS(0.031)DS(0.019)STTEEMEVAVSK;CGS(0.699)PS(0.286)DS(0.013)S(0.002)TTEEMEVAVSK 252.38 7.13E-38 10499100 9696.5 10607.6 10821.9 10559.4 9473.4 8116.5 9442.4 9479.6 9358.6 8736.6 TRUE FALSE 8871.761757 9917.043312 10087.33958 11372.68682 9096.054418 8576.049216 8812.514725 9396.720857 10331.45996 9818.955966 0.903534122 1.00998959 1.027333213 1.158237888 0.926376944 0.873417627 0.897500178 0.956997963 1.052195365 1 13.26135392 CGSGPVHISGQHLVAVEEDAES(ph)EDEEEEDVK ddPTM_A459_MK2206_30min_R1 12 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK 31 0 E5RI98;P06748-2;P06748;P06748-3 E5RI98;P06748-2 NPM1 Nucleophosmin 1 CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGS(0.002)GPVHIS(0.003)GQHLVAVEEDAES(0.995)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK 134.17 1.97E-18 361343000 47109.39 42388.36 49094.54 33826.63 50159.33 54081.1 59403.35 46150.19 49966.66 47725.9 TRUE FALSE 43102.489 39628.87006 45762.13941 36431.9629 48161.37767 57143.12515 55440.66091 45746.70375 55160.87311 53638.5448 0.803573049 0.738813296 0.853157735 0.679212366 0.897887477 1.065336977 1.033597409 0.852869964 1.028381238 1 15.71098248 -6.499692679 6.107753922 0.988924524 0.773587419 0.715824271 0.067406911 0.098031273 13.00560161 0.021388095 0.023276673 3.16E-07 6.499692679 -0.215337105 CGSGPVHISGQHLVAVEEDAES(ph)EDEEEEDVK ddPTM_A459_MK2206_30min_R2 8 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK 31 0 E5RI98;P06748-2;P06748;P06748-3 E5RI98;P06748-2 NPM1 Nucleophosmin 1 CGSGPVHIS(0.001)GQHLVAVEEDAES(0.999)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGS(0.001)GPVHIS(0.001)GQHLVAVEEDAES(0.998)EDEEEEDVK 143.04 4.21E-19 381635800 297954.9 448677.5 414971.8 818794 831340 969778 843870 542246 743282 1117877 TRUE FALSE 320766.5562 426396.8278 428806.7527 751895.911 798697.4145 1006683.581 733068.8553 613119.414 807931.3248 1081400.765 0.296621351 0.394300468 0.39652899 0.695298113 0.738576706 0.930907036 0.677888234 0.566967801 0.747115548 1 20.04446985 -5.773990276 2.893724209 0.756849149 0.350328663 0.715734695 0.117127221 0.147826788 2.532814062 0.035019267 0.061185747 1.68E-06 5.773990276 -0.406520486 CGSGPVHISGQHLVAVEEDAES(ph)EDEEEEDVKLLSISGK ddPTM_A459_MK2206_30min_R1 1 CGSGPVHISGQHLVAVEEDAESEDEEEEDVKLLSISGK 38 1 E5RI98;P06748-2;P06748;P06748-3 E5RI98;P06748-2 NPM1 Nucleophosmin 1 CGSGPVHISGQHLVAVEEDAES(0.997)EDEEEEDVKLLS(0.002)ISGK 69.162 6.87E-06 24202000 1070.2 698.89 756.67 684.45 1513.4 1253.7 955.85 1230.3 484.55 298.79 TRUE FALSE 979.1738702 653.392134 705.3093486 737.1664576 1453.118073 1324.683411 892.0869905 1219.543617 534.9207065 335.8063609 2.915888393 1.94574079 2.100345409 2.195212906 4.327249994 3.944783556 2.656551794 3.631687063 1.592943936 1 8.391485748 CGSPS(ph)DSSTTEEMEVAVSK ddPTM_A459_MK2206_30min_R2 1 CGSPSDSSTTEEMEVAVSK 19 0 P31751-2;P31751;M0R0P9;M0R275;M0QZK3;J3QLS6;C9JHS6;J3QKW1 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 CGS(0.394)PS(0.605)DS(0.001)STTEEMEVAVSK 96.143 0.0016622 4048700 35208 38479 36258 37067 36482 31577 50204 32017 31477 38547 TRUE FALSE 37903.55155 36568.18881 37466.82362 34038.50753 35049.53337 32778.68486 43612.15449 36201.73183 34214.81256 37289.21455 1.016474925 0.98066396 1.004763015 0.912824471 0.939937561 0.879039295 1.169564847 0.970836535 0.917552514 1 15.18647079 CIFMSETQS(ph)SPTK ddPTM_A459_MK2206_30min_R1 2 CIFMSETQSSPTK 13 0 B4DGW0;A0A087WUY7;O75928-2;O75928 B4DGW0 PIAS2 E3 SUMO-protein ligase PIAS2 1 CIFMSET(0.001)QS(0.499)S(0.499)PT(0.002)K;CIFMSETQS(0.333)S(0.333)PT(0.333)K 255.54 9.60E-24 33167000 5347 5862.7 6423.3 4361.7 4747.6 4248.2 5670.7 4794.6 5835.2 5765.8 TRUE FALSE 4892.209572 5481.037164 5987.304292 4697.63889 4558.493039 4488.729413 5292.41795 4752.681318 6441.789921 6480.110834 0.7549577 0.845824602 0.923950909 0.724931874 0.703459116 0.692693309 0.816717196 0.73342593 0.99408638 1 12.66180277 -8.268996517 24.35677814 0.997043269 0.776515296 0.635054743 0.067468753 309.6017031 997832.5414 0.066366736 0.018507311 5.38E-09 8.268996517 -0.220527973 CIFMSETQS(ph)SPTK ddPTM_A459_MK2206_30min_R2 1 CIFMSETQSSPTK 13 0 B4DGW0;A0A087WUY7;O75928-2;O75928 B4DGW0 PIAS2 E3 SUMO-protein ligase PIAS2 1 CIFMSETQS(0.943)S(0.057)PTK 281.32 1.27E-48 8423400 48259 43467 49648 48456 50525 35421 48409 41840 31382 46350 TRUE FALSE 51953.74614 41308.49199 51303.23954 44496.9898 48541.13463 36768.97098 42052.84015 47308.63166 34111.54963 44837.6033 1.15870926 0.921291259 1.144201201 0.992403396 1.08259878 0.820047645 0.937892239 1.055110625 0.760779951 1 15.45242154 -6.741157118 24.99528653 0.919655865 1.053083779 0.339518941 0.100836882 296.4411692 365324.968 0.031421734 0.031385671 1.81E-07 6.741157118 0.133427914 CIFMSETQSS(ph)PTK ddPTM_A459_MK2206_30min_R2 4 CIFMSETQSSPTK 13 0 B4DGW0;A0A087WUY7;O75928-2;O75928 B4DGW0 PIAS2 E3 SUMO-protein ligase PIAS2 1 CIFMSETQS(0.078)S(0.922)PTK;CIFMSETQS(0.161)S(0.839)PTK;CIFMSETQS(0.276)S(0.567)PT(0.156)K;CIFMSETQS(0.052)S(0.947)PT(0.001)K 171.26 0.00020643 27525900 187809 175080 182064 180134 165120 144624 211187 157875 136142 195320 TRUE FALSE 202187.8014 166385.7818 188133.9229 165416.476 158636.5591 150127.7677 183457.8932 178509.8046 147983.3851 188946.7244 1.070078362 0.880596276 0.99569825 0.875466227 0.839583537 0.794550782 0.970950377 0.944762632 0.783201643 1 17.52761998 -1.831464841 1.139602188 0.890110768 199.9999967 0.301594799 0.075728732 2527.320466 3.779848855 0.02261859 1314849.78 0.014741279 1.831464841 199.1098859 CIIPNHEK ddPTM_A459_MK2206_30min_R1 1 CIIPNHEK 8 0 P35579;P35579-2;P35749-4;P35749-3;P35749;P35749-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35579-2;P35749-4;P35580 MYH9;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 0 91.853 0.044485 0 2819.1 2791.2 2596.9 2119.3 2593.9 2504.1 2784.1 2963 2582.6 2670.2 FALSE TRUE 2579.320741 2609.492373 2420.629663 2282.528853 2490.57947 2645.879978 2598.377769 2937.094803 2851.070512 3001.004535 0.859485786 0.86953963 0.806606466 0.760588272 0.829915264 0.881664772 0.865836002 0.978703887 0.950038722 1 11.55122978 -7.604615916 1.217106161 0.988014236 0.825134274 0.774977438 0.03418566 0.239073486 0.656735464 0.029244591 0.012689719 2.49E-08 7.604615916 -0.162879963 CIIS(ph)DGMDAGLWQLCT(ph)TR ddPTM_A459_MK2206_30min_R2 1 CIISDGMDAGLWQLCTTR 18 0 Q9Y4E5-4 Q9Y4E5-4 ZNF451 Zinc finger protein 451 2 CIIS(1)DGMDAGLWQLCT(0.539)T(0.461)R 61.616 0.045008 15937000 2100.3 13006 10719 40638 22683 66730 7212.8 10540 40287 4846.8 TRUE FALSE 2261.100583 12360.14095 11076.36611 37317.74541 21792.35145 69269.45691 6265.750696 11917.61419 43791.09044 4688.649313 0.482249883 2.636183713 2.362378879 7.959167537 4.647895373 14.77386179 1.336365823 2.541801144 9.339809296 1 12.19495666 -5.663951462 6.496833015 6.121440515 1.807107642 0.186284078 3.940368245 0.358702027 20.25336275 1.070009741 1.863716211 2.17E-06 5.663951462 -4.314332872 CIS(ph)PEGVNGNR ddPTM_A459_MK2206_30min_R2 2 CISPEGVNGNR 11 0 G5E9L9;Q8N568-2;Q8N568;A0A0U1RR70;Q8N568-3 G5E9L9 DCLK2 Serine/threonine-protein kinase DCLK2 1 CIS(1)PEGVNGNR;CIS(1)PEGVNGNR 112.02 0.0079105 12021300 20196.7 40475 30502 31394 39283 32417 45729 28715 33877 34952 TRUE FALSE 21742.97488 38465.07036 31518.92146 28829.00978 37740.55204 33650.65165 39724.72737 32468.14909 36823.56022 33811.5191 0.643064123 1.137632126 0.932194775 0.852638702 1.116203975 0.995242229 1.174887388 0.960268866 1.089083283 1 15.04522722 -6.261419476 24.99999306 1.056872786 0.911886862 0.280988544 0.127279089 2.672188085 3355784.636 0.036866606 0.044536243 5.48E-07 6.261419476 -0.144985924 CLHEDPQS(ph)PPPLPAEKPIGNTFSTVSGK ddPTM_A459_MK2206_30min_R2 2 CLHEDPQSPPPLPAEKPIGNTFSTVSGK 28 1 A0A0U1RQE4;Q5HYK7-2;Q5HYK7;A0A494C1M0 A0A0U1RQE4;A0A494C1M0 SH3D19 SH3 domain-containing protein 19 1 CLHEDPQS(0.974)PPPLPAEKPIGNT(0.007)FS(0.008)T(0.008)VS(0.004)GK;CLHEDPQS(1)PPPLPAEKPIGNTFSTVSGK 70.391 0.00020369 31043000 121354 127430 115045 128976 106022 95875 101153 87888 75544 88986 TRUE FALSE 130644.9555 121102.0115 118880.5429 118438.2482 101859.0436 99523.59031 87871.48959 99375.26336 82114.68057 86082.39411 1.517673351 1.406815096 1.381008789 1.375870751 1.183273823 1.156143383 1.020783524 1.154420302 0.953907955 1 16.39343058 -6.31793824 0.619841493 1.004198304 1.515693171 0.91548934 0.053768816 0.240327213 0.196502934 0.036628035 0.066503386 4.81E-07 6.31793824 0.511494867 CLIKSPDRLADINY(ph)EGR ddPTM_A459_MK2206_30min_R2 1 CLIKSPDRLADINYEGR 17 2 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 CLIKSPDRLADINY(1)EGR 95.755 0.017689 9804200 10387 18441 12703 18738 23827 17949 21009 12786 18092 18879 TRUE FALSE 11182.23671 17525.24676 13126.51168 17207.04546 22891.43226 18632.06177 18250.49306 14457.1741 19665.60946 18262.97978 0.612289826 0.959605003 0.718749724 0.942181707 1.253433587 1.020209298 0.999316283 0.791610913 1.076801798 1 14.15663455 -5.926086737 5.730426446 1.019044617 0.786158616 0.43085068 0.132656705 0.216068291 12.39358322 0.038357915 0.057420414 1.19E-06 5.926086737 -0.232886001 CLS(ph)IGIQVDDAEEPDK ddPTM_A459_MK2206_30min_R2 1 CLSIGIQVDDAEEPDK 16 0 A8MYR7;A8MXQ8;A0A0A0MTP4;O14490-3;O14490-5;O14490-2;O14490-4;O14490-6;O14490-7;O14490 A8MYR7 DLGAP1 Disks large-associated protein 1 1 CLS(1)IGIQVDDAEEPDK 96.464 0.014489 0 33467 34115 36267 34641 32963 25049 39214 27048 26468 41777 TRUE FALSE 36029.25925 32420.89871 37476.12368 31810.71949 31668.70699 26002.25725 34065.1547 30583.26647 28770.1388 40413.81991 0.891508383 0.802223071 0.927309612 0.787124789 0.783610831 0.643400137 0.842908559 0.756752679 0.711888628 1 15.3025611 -5.898090676 7.799080853 0.774072073 0.866236465 0.134242298 0.092517295 0.403462286 27.47614269 0.024620502 0.036664281 1.26E-06 5.898090676 0.092164393 CLTTDEYDGHSTYPSHQYQ ddPTM_A459_MK2206_30min_R2 2 CLTTDEYDGHSTYPSHQYQ 19 0 P30043;M0R192;A0A2R8YEP4 P30043 BLVRB Flavin reductase (NADPH) 0 ; 117.2 0.00064784 17872300 20499.2 36817 27392 55778 43712 49546 39892 35445 43164 36432 FALSE TRUE 22068.63451 34988.72132 28305.23561 51220.75898 41995.64724 51431.50775 34654.13248 40077.7832 46918.3267 35243.22682 0.626180872 0.992778598 0.803139728 1.453350433 1.19159484 1.459330271 0.983284892 1.137176894 1.33127216 1 15.1050584 -5.741935143 24.99507018 1.226642304 0.825907381 0.541962941 0.174517848 187.7862766 240649.9805 0.046108558 0.079714112 1.81E-06 5.741935143 -0.400734923 CLVAGLLS(ph)PR ddPTM_A459_MK2206_30min_R1 2 CLVAGLLSPR 10 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 CLVAGLLS(1)PR;CLVAGLLS(1)PR 137.46 0.0017439 18889100 5077.4 5096.9 5342.7 3603.8 4676.6 4214.5 3967.2 4309.5 3858.3 3469.1 TRUE FALSE 4645.540468 4765.090884 4980.05241 3881.3653 4490.321119 4453.121348 3702.555327 4271.822496 4259.384092 3898.878298 1.191506919 1.222169691 1.277303888 0.995508196 1.151695635 1.142154488 0.949646294 1.095654229 1.092463977 1 11.92884341 -5.756205293 24.99998524 1.067521627 1.229511136 0.590780923 0.064413505 93.88431624 448420.8846 0.017786551 0.029666183 1.75E-06 5.756205293 0.161989509 CMVEVPQELETSTGHS(ph)LEK ddPTM_A459_MK2206_30min_R2 1 CMVEVPQELETSTGHSLEK 19 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 CMVEVPQELET(0.052)S(0.235)T(0.307)GHS(0.406)LEK 59.281 0.028698 4295300 22312 21055 22255 24488 21368 21571 23356 14637 19189 20978 TRUE FALSE 24020.22388 20009.43932 22996.97059 22487.25207 20528.98495 22391.89952 20289.32914 16550.10616 20858.02453 20293.48958 1.183641866 0.986002887 1.133219129 1.108101787 1.011604479 1.10340311 0.999794987 0.815537717 1.027818525 1 14.30872935 -7.494499468 6.120858244 0.934626715 1.080676967 0.417096527 0.074554008 0.157708874 19.7870635 0.030852976 0.01971366 3.20E-08 7.494499468 0.146050252 CNAEEHVR ddPTM_A459_MK2206_30min_R2 1 CNAEEHVR 8 0 P11279-2;P11279 P11279-2 LAMP1 Lysosome-associated membrane glycoprotein 1 0 93.111 0.041838 0 13955 9716.7 9089.1 8579.6 10178 6755.1 9259.9 13129 13503 13024 FALSE TRUE 15023.40553 9234.182807 9392.126058 7878.619235 9778.36058 7012.170064 8044.064007 14845.00538 14677.46653 12599.02795 1.192425764 0.732928195 0.74546434 0.625335484 0.776120239 0.556564371 0.638467034 1.17826593 1.16496817 1 13.62102481 -7.766106766 24.99999647 1.128712893 0.739935717 0.490894974 0.168382739 96.28217638 515704.1391 0.0897276 0.04534423 1.71E-08 7.766106766 -0.388777176 CPARLS(ph)DSENEEPSR ddPTM_A459_MK2206_30min_R1 2 CPARLSDSENEEPSR 15 1 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 CPARLS(0.982)DS(0.018)ENEEPSR;CPARLS(0.853)DS(0.147)ENEEPSR 189.8 0.00012653 12467800 5307.3 5744.2 5607.4 5419.7 5310.6 4659 5262.8 5213 3955.1 4415.2 TRUE FALSE 4855.886265 5370.251536 5226.785311 5837.126233 5099.067557 4922.788554 4911.728215 5167.423291 4366.246798 4962.188309 0.978577588 1.082234531 1.053322644 1.176320984 1.027584452 0.992060004 0.98983108 1.041359773 0.879903487 1 12.27676077 -6.517216823 9.808089747 0.986600579 1.075671045 0.349177557 0.05890954 0.171080743 225.464469 0.018740322 0.01973914 3.04E-07 6.517216823 0.089070465 CPFPAGAALACCS(ph)EDEEDDEEHEGGGSR ddPTM_A459_MK2206_30min_R1 1 CPFPAGAALACCSEDEEDDEEHEGGGSR 28 0 Q147X3 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 CPFPAGAALACCS(1)EDEEDDEEHEGGGSR 82.486 3.29E-05 8828100 2744.5 2858.8 2543 3022.5 3075.6 2084.2 2613.8 2881.1 2607.6 2469.4 TRUE FALSE 2511.065863 2672.6916 2370.388245 3255.293474 2953.092339 2202.205603 2439.438171 2855.910846 2878.669351 2775.327915 0.904781683 0.963018311 0.854093036 1.172940126 1.064051683 0.793493839 0.878972952 1.029035463 1.037235757 1 11.43844253 CPFPAGAALACCS(ph)EDEEDDEEHEGGGSR ddPTM_A459_MK2206_30min_R2 1 CPFPAGAALACCSEDEEDDEEHEGGGSR 28 0 Q147X3 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 CPFPAGAALACCS(1)EDEEDDEEHEGGGSR 154.87 1.18E-15 3158200 9414.3 10097 8204.1 11091 8832.9 10369 11273 9333.8 8166.6 11615 TRUE FALSE 10135.06605 9595.597662 8477.620599 10184.82982 8486.075964 10763.59956 9792.841559 10553.75971 8876.916106 11236.0035 0.902016989 0.85400451 0.75450498 0.906445946 0.755257504 0.957956231 0.871559141 0.939280564 0.790042127 1 13.45584136 -6.775684383 24.99999908 0.905459603 0.835091383 0.227380839 0.070784131 391.6160355 687282.5887 0.023567942 0.020881453 1.68E-07 6.775684383 -0.07036822 CPLPCIPTLIGT(ph)PVK ddPTM_A459_MK2206_30min_R1 1 CPLPCIPTLIGTPVK 15 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 CPLPCIPTLIGT(1)PVK 143.93 0.0008779 6054800 4179.6 4468.7 4448.8 2888.5 3196.6 3497.5 4616.2 3729.8 4517.6 4544.8 TRUE FALSE 3824.103072 4177.786818 4146.827851 3110.97277 3069.272653 3695.525428 4308.261721 3697.190752 4987.220686 5107.844135 0.748672624 0.817915877 0.811854814 0.60905789 0.600893953 0.723500038 0.843459903 0.723826071 0.976384665 1 12.31849879 -8.280334125 5.816444437 0.993533528 0.734488395 0.63470174 0.07687211 0.124586962 15.4774647 0.075389207 0.021748665 5.24E-09 8.280334125 -0.259045133 CPLPCIPTLIGT(ph)PVK ddPTM_A459_MK2206_30min_R2 1 CPLPCIPTLIGTPVK 15 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 CPLPCIPT(0.005)LIGT(0.995)PVK 158.17 0.00034718 11362000 59847 45419 44289 47155 39501 36514 48696 38995 37106 51707 TRUE FALSE 64428.93233 43163.55851 45765.57316 43302.28566 37949.99226 37903.56586 42302.15671 44091.78039 40333.41281 50019.80482 1.288068447 0.862929367 0.914949055 0.865702811 0.758699327 0.757771167 0.845708152 0.881486454 0.806348864 1 15.61021181 -4.759373094 5.478479572 0.845667938 1.31057094 0.781300199 0.068666014 0.069494209 6.536390075 0.017276667 0.122855439 1.74E-05 4.759373094 0.464903003 CPQEGFDHRDSKVS(ph)LQEK ddPTM_A459_MK2206_30min_R1 1 CPQEGFDHRDSKVSLQEK 18 2 Q16655 Q16655 MLANA Melanoma antigen recognized by T-cells 1 1 CPQEGFDHRDS(0.057)KVS(0.943)LQEK 46.415 0.04602 8451800 3193.2 2984.1 3312.8 2808.5 3190.5 2964.1 2829 2900.7 2711 2750 TRUE FALSE 2921.601572 2789.834548 3087.936366 3024.811157 3063.415629 3131.92478 2640.282572 2875.339486 2992.818151 3090.690761 0.94529081 0.90265729 0.999108809 0.978684505 0.991175069 1.01334136 0.85426941 0.930322607 0.968333095 1 11.5937136 -4.961209687 0.002113694 1.90367851 2.06E-05 0.024025225 0.047276844 1266548.514 442.170184 196233.7711 202025.8387 1.09E-05 4.961209687 -1.903657906 CPS(ph)DPDSTSQPR ddPTM_A459_MK2206_30min_R2 1 CPSDPDSTSQPR 12 0 Q6XZF7;A0A1C7CYY6;A0A1B0GTX1;Q6XZF7-2 Q6XZF7 DNMBP Dynamin-binding protein 1 CPS(1)DPDSTSQPR 130.19 0.0022031 3463800 12453 15409 11428 13874 14258 15845 14588 9372.6 15595 11658 TRUE FALSE 13406.41125 14643.81147 11809.00382 12740.44982 13698.15928 16447.99258 12672.57808 10597.631 16951.42491 11277.60041 1.188764521 1.298486462 1.047120254 1.129712825 1.214634211 1.458465629 1.123694546 0.939706197 1.503105651 1 13.46117251 -10.74587033 5.393762483 0.999986884 1.203614442 0.128212056 0.164308672 2.55E-05 3.67E-06 0.156300947 0.037906107 1.80E-11 10.74587033 0.203627558 CPS(ph)PINEHNGLIK ddPTM_A459_MK2206_30min_R2 1 CPSPINEHNGLIK 13 0 A0A087X1M6;G5E9X3;Q9Y2H6-2;Q9Y2H6 A0A087X1M6 FNDC3A Fibronectin type-III domain-containing protein 3A 1 CPS(1)PINEHNGLIK 79.346 0.041167 0 22719 15397 13058 13953 12889 14749 30347 14695 16787 15583 TRUE FALSE 24458.38411 14632.40737 13493.3472 12812.99527 12382.9131 15310.28353 26362.40245 16615.68696 18247.10292 15074.52799 1.622497509 0.970671014 0.895109102 0.849976548 0.821446158 1.015639332 1.748804505 1.102235969 1.210459321 1 13.87982521 -7.051580493 24.99951623 1.289370019 1.001596129 0.138745618 0.280948036 599.2434371 290433.3436 0.107845165 0.083537422 8.88E-08 7.051580493 -0.28777389 CPS(ph)PTMSLPSSWK ddPTM_A459_MK2206_30min_R1 2 CPSPTMSLPSSWK 13 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 CPS(0.719)PT(0.071)MS(0.209)LPSSWK;CPS(0.7)PT(0.299)MS(0.001)LPSSWK 180.3 0.00011186 180439000 7940.7 8523.1 8926.1 6467.2 7845.4 7559.6 8644.6 7697.4 6725.1 7112.9 TRUE FALSE 7265.301767 7968.244641 8320.221202 6965.304865 7532.901105 7987.618019 8067.934507 7630.102443 7424.198211 7994.099752 0.908833013 0.996765726 1.040795269 0.871305723 0.942307619 0.999189185 1.009236156 0.954466754 0.928709729 1 12.96471986 -6.746404897 24.97752959 0.97740678 0.954938268 0.067428548 0.048266217 922.7768697 1533052.268 0.016862119 0.016801189 1.79E-07 6.746404897 -0.022468512 CPS(ph)PTMSLPSSWK ddPTM_A459_MK2206_30min_R2 2 CPSPTMSLPSSWK 13 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 CPS(0.989)PT(0.011)MSLPSSWK;CPS(0.497)PT(0.497)MS(0.007)LPSSWK 136.6 0.0010853 93305000 74936 75969 68552 76132 74558 74016 87115 63704 64225 75699 TRUE FALSE 80673.15778 72196.48993 70837.48947 69911.77207 71630.4783 76832.73075 75676.69586 72030.33153 69811.17441 73228.94783 1.101656656 0.98590096 0.967342718 0.954701305 0.978171617 1.049212545 1.033425962 0.983631933 0.953327563 1 16.16012645 -4.760126394 24.99603874 0.990113428 1.101656791 0.56263124 0.029655542 28.06262852 534037.6291 0.008271748 0.050020472 1.74E-05 4.760126394 0.111543363 CPS(ph)QSSSRPAAMISQPPTPPTGQPVR ddPTM_A459_MK2206_30min_R1 1 CPSQSSSRPAAMISQPPTPPTGQPVR 26 1 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 CPS(0.646)QS(0.208)S(0.065)S(0.065)RPAAMIS(0.015)QPPT(0.001)PPTGQPVR 62.765 0.0017401 4131000 358.75 293.44 385.31 338.9 353.65 358.93 410.68 360.66 452.89 351.71 TRUE FALSE 328.2364286 274.3370027 359.1562307 365.0021367 339.5633716 379.2523064 383.2842865 357.5067876 499.9695362 395.2824901 0.830384439 0.694027713 0.908606477 0.923395662 0.85903975 0.959446259 0.969646509 0.904433656 1.264841091 1 8.626740239 -6.532626021 0.452263976 1.078516247 0.74801572 0.502380983 0.097551064 1.127107679 0.462666149 0.08926353 0.162713822 2.93E-07 6.532626021 -0.330500527 CPS(ph)QSSSRPAAMISQPPTPPTGQPVR ddPTM_A459_MK2206_30min_R2 2 CPSQSSSRPAAMISQPPTPPTGQPVR 26 1 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 CPS(0.823)QS(0.043)S(0.043)S(0.087)RPAAMIS(0.004)QPPTPPTGQPVR;CPS(0.484)QS(0.187)S(0.053)S(0.136)RPAAMIS(0.138)QPPT(0.002)PPTGQPVR 75.956 0.00010406 96358000 6302.1 7066.3 1631.5 5104 6617.2 3186.2 7614.3 2393.3 5603.9 3066.2 TRUE FALSE 6784.593621 6715.397817 1685.893396 4686.986873 6357.375479 3307.453074 6614.533264 2706.112527 6091.317092 2966.150145 2.287339915 2.264011425 0.568377632 1.580158334 2.143308723 1.115065965 2.230006217 0.912331607 2.053610503 1 11.53437591 -1.522878745 0.043946881 2.87E-13 4.366763547 0.112560984 0.59142631 1655.803768 5.543926709 142.3648935 516.9767088 0.03 1.522878745 4.366763547 CPSLDNLAVPES(ph)PGVGGGK ddPTM_A459_MK2206_30min_R2 1 CPSLDNLAVPESPGVGGGK 19 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 CPSLDNLAVPES(1)PGVGGGK 96.734 0.0016085 3261500 22887 25540 20915 22265 22721 19612 16285 13787 19279 18876 TRUE FALSE 24639.24632 24271.72074 21612.29566 20445.87828 21828.85938 20358.3484 14146.75994 15589.00824 20955.85257 18260.07767 1.349350576 1.329223302 1.183581804 1.119703796 1.19544176 1.114910285 0.774737118 0.853720807 1.147632171 1 14.15640528 -6.123920313 0.702870219 0.941753629 1.358215315 0.597824041 0.111599451 0.614292969 0.622975746 0.070636309 0.15431137 7.52E-07 6.123920313 0.416461686 CPSPT(ph)MSLPSSWK ddPTM_A459_MK2206_30min_R2 1 CPSPTMSLPSSWK 13 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 CPS(0.305)PT(0.695)MSLPSSWK 124.47 0.022955 14314000 36172 35999 31606 38438 34564 35898 44513 30833 25335 35579 TRUE FALSE 38941.35613 34211.34201 32659.72827 35297.49244 33206.84369 37264.12354 38668.38963 34862.97897 27538.5925 34418.06014 1.131422165 0.993993905 0.948912522 1.025551478 0.964808695 1.082690988 1.123491256 1.0129269 0.800120413 1 15.07087817 -8.078286715 9.321326033 0.901324183 1.034438468 0.357547066 0.073159998 0.497941146 56.18970814 0.049450457 0.018653557 8.35E-09 8.078286715 0.133114285 CPSQS(ph)SSRPAAMISQPPTPPTGQPVREDAK ddPTM_A459_MK2206_30min_R2 1 CPSQSSSRPAAMISQPPTPPTGQPVREDAK 30 2 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 CPS(0.035)QS(0.313)S(0.313)S(0.313)RPAAMIS(0.022)QPPT(0.001)PPT(0.002)GQPVREDAK 46.662 0.013156 15544000 6981.6 9727 8877.9 11020 7004.4 7063.4 9424.5 6583.6 8475.8 8596.8 TRUE FALSE 7516.116664 9243.971324 9173.884755 10119.63075 6729.372062 7332.202637 8187.051829 7444.099125 9213.009763 8316.28712 0.903782728 1.111550286 1.103122658 1.216844801 0.809179862 0.881667808 0.984459977 0.89512291 1.107827283 1 13.02172385 -6.261212962 24.99992412 0.939801214 1.087183878 0.295088284 0.103722884 25.77749805 2846261.023 0.031581517 0.038270378 5.48E-07 6.261212962 0.147382664 CPT(ph)PDFEDLPER ddPTM_A459_MK2206_30min_R2 1 CPTPDFEDLPER 12 0 H7C4C9;Q3B820-2;Q3B820;Q3B820-3 H7C4C9 FAM161A Protein FAM161A 1 CPT(1)PDFEDLPER 98 0.036684 5822300 8603.4 10723 10029 9155.7 10824 11438 10059 9697.8 9443.4 11671 TRUE FALSE 9262.082919 10190.51141 10363.36185 8407.650022 10398.99537 11873.2811 8738.241217 10965.33576 10264.76986 11290.17623 0.82036655 0.902599854 0.917909663 0.744687227 0.921065816 1.051647102 0.773968541 0.971228043 0.909177116 1 13.46278038 -6.495221789 24.60953958 0.935331783 0.852684519 0.235541131 0.080731445 1002.359825 891914.2032 0.02466908 0.027902062 3.20E-07 6.495221789 -0.082647264 CPT(ph)PEIQK ddPTM_A459_MK2206_30min_R2 2 CPTPEIQK 8 0 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 CPT(1)PEIQK;CPT(1)PEIQK 100.82 0.041004 99969000 973870 873000 945810 894600 800420 719140 1007170 864810 646050 1044830 TRUE FALSE 1048430.236 829648.0895 977342.8333 821508.3183 768991.489 746507.3766 874927.3692 977843.6363 702242.2612 1010737.283 1.037292533 0.820834557 0.966960307 0.812781256 0.760822325 0.738577066 0.865632825 0.96745579 0.694782188 1 19.94697662 -1.959029399 1.178619596 0.837366047 199.9840459 0.229773899 0.099782374 2466.192157 4.364331686 0.028839184 1326711.701 0.010989314 1.959029399 199.1466798 CQENGQELS(ph)PIALEPGPEPHR ddPTM_A459_MK2206_30min_R2 2 CQENGQELSPIALEPGPEPHR 21 0 O94966-2;O94966-7;O94966-6;O94966-5;A0A0A0MR08;H0YB23 O94966-2 USP19 Ubiquitin carboxyl-terminal hydrolase 19 1 CQENGQELS(1)PIALEPGPEPHR;CQENGQELS(1)PIALEPGPEPHR 89.08 0.00055273 2141900 23789.9 25398 19206.4 24788 22853.1 22470 21357.4 16648.2 19322.4 21880.9 TRUE FALSE 25611.27304 24136.77225 19846.73179 22762.74111 21955.77247 23325.1116 18553.14773 18824.1769 21003.02743 21166.92802 1.209966463 1.140305869 0.937629294 1.075391813 1.037267781 1.10196017 0.876515841 0.889320211 0.99225676 1 14.36952428 -1.522878745 0.420034085 0.959052097 5.655238664 0.514368873 0.071712463 67.28200017 0.862067979 0.052120473 265.4935247 0.03 1.522878745 4.696186567 CQLPEDVDPTSVT(ph)SALR ddPTM_A459_MK2206_30min_R1 1 CQLPEDVDPTSVTSALR 17 0 C9J5A3;D3YTC6;Q68DG0;Q8N241;Q9UBY9;Q9UBY9-2 C9J5A3 HSPB7;DKFZp779D0968 Heat shock protein beta-7 1 CQLPEDVDPT(0.001)S(0.001)VT(0.499)S(0.499)ALR 84.046 0.029473 8631300 2903.8 3160.5 3338.1 2495.8 2645.4 2623.1 2765.3 2886.8 2708.1 2679.4 TRUE FALSE 2656.816562 2954.750876 3111.519072 2688.026948 2540.028116 2771.617655 2580.831883 2861.561012 2989.616686 3011.3443 0.882269278 0.981206591 1.033265798 0.892633548 0.843486451 0.92039215 0.857036468 0.950260324 0.992784746 1 11.55619195 -8.120110052 3.83143991 0.99575815 0.918520827 0.260799472 0.053574592 0.381691428 9.469801206 0.044936998 0.015374946 7.58E-09 8.120110052 -0.077237323 CQSVSS(ph)AGELETENYER ddPTM_A459_MK2206_30min_R1 1 CQSVSSAGELETENYER 17 0 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 CQSVS(0.038)S(0.96)AGELET(0.002)ENYER 171.87 6.41E-07 4735700 1579.1 1579.4 1497.7 1112.4 1520.2 1331.1 1614.4 1421.2 1112.8 1137 TRUE FALSE 1444.789253 1476.580773 1396.040297 1198.077241 1459.647215 1406.465732 1506.706322 1408.774598 1228.479542 1277.860144 1.130631752 1.155510468 1.092482854 0.937565231 1.142258972 1.100641364 1.179085465 1.102448186 0.961356803 1 10.31951423 -8.255148096 23.89512527 0.980678392 1.104313915 0.387967763 0.062492435 269.6070659 1024021.228 0.047239898 0.016829481 5.56E-09 8.255148096 0.123635523 CQSVSS(ph)AGELETENYER ddPTM_A459_MK2206_30min_R2 1 CQSVSSAGELETENYER 17 0 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 CQS(0.007)VS(0.224)S(0.769)AGELETENYER 105.02 0.0026984 4185500 13584 21761 17268 24224 21554 25895 21458 20123 21129 17286 TRUE FALSE 14624.00148 20680.38038 17843.7065 22244.82171 20707.68166 26880.45237 18640.53882 22753.14519 22966.76223 16721.95924 0.874538759 1.236719938 1.067082287 1.33027604 1.238352598 1.607494193 1.114734139 1.3606746 1.373449241 1 14.02945627 -4.079109738 0.841436067 1.303034446 7.77E-12 0.316928481 0.167037605 7.649254228 1.795771782 0.056065608 12.24475175 8.33E-05 4.079109738 -1.303034446 CRDDSFFGETSHNYHK ddPTM_A459_MK2206_30min_R1 1 CRDDSFFGETSHNYHK 16 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991;H0Y8T4 D6REM6 MATR3 Matrin-3 0 91.307 0.00486 7341600 3556.7 2678.7 3397.8 2833.6 4133.3 4340.5 4720.8 2851.7 3187.2 3478.8 FALSE TRUE 3254.183988 2504.316143 3167.166803 3051.844363 3968.661909 4586.255359 4405.884046 2826.767888 3518.520846 3909.780008 0.832318949 0.640526101 0.810062663 0.780566773 1.015060157 1.173021334 1.126887967 0.722999218 0.899928088 1 11.93287172 -6.225173937 5.789076813 0.99197779 0.75814451 0.436860473 0.12440953 0.208839639 20.29727695 0.041303204 0.052627788 5.95E-07 6.225173937 -0.23383328 CRDPPSNPVAAS(ph)PR ddPTM_A459_MK2206_30min_R1 1 CRDPPSNPVAASPR 14 1 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 CRDPPS(0.065)NPVAAS(0.935)PR 81.713 0.017237 2990700 936.79 767.74 1062 858.77 1146.5 903.01 841.82 1292.6 573.9 770.01 TRUE FALSE 857.1110912 717.7599865 989.9143989 924.9126142 1100.832477 954.1376458 785.6637238 1281.298934 633.5589587 865.4046521 0.990416552 0.829392337 1.143874598 1.068763164 1.272043633 1.10253353 0.907857061 1.480577821 0.732095624 1 9.757231066 -5.269239366 24.38786068 1.10553613 0.909904441 0.115222423 0.193351814 690.7542649 2159757.635 0.046850356 0.100596046 5.38E-06 5.269239366 -0.195631689 CRDPPSNPVAAS(ph)PR ddPTM_A459_MK2206_30min_R2 1 CRDPPSNPVAASPR 14 1 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 CRDPPS(0.001)NPVAAS(0.999)PR 83.894 0.014763 5897900 32079 28769 30989 31481 31394 31451 30897 27543 39021 32968 TRUE FALSE 34534.9929 27340.37329 32022.15779 28908.9016 30161.31382 32647.88984 26840.18679 31142.96467 42414.97605 31892.25686 1.082864504 0.857273081 1.004073118 0.906455185 0.945725288 1.023693305 0.841589446 0.976505514 1.329945894 1 14.96091857 -8.09484863 8.79939177 1.163501389 0.947915533 0.408910445 0.101391591 0.306133923 26.10470306 0.062197538 0.02342299 8.04E-09 8.09484863 -0.215585856 CREMDEQIR ddPTM_A459_MK2206_30min_R1 2 CREMDEQIR 9 1 J3KN67;A0A2R2Y2Q3;A0A494C0P6;P06753-2;A0A087WWU8;P06753-3;P06753-6 J3KN67;P06753-2 TPM3 Tropomyosin alpha-3 chain 0 ; 141.52 0.0058956 66617000 3688.1 4334.8 4366.6 3987.4 5289.3 4640.8 4145.5 5032.9 2504.3 1796.67 FALSE TRUE 3374.407728 4052.603732 4070.207358 4294.510239 5078.615981 4903.558085 3868.961259 4988.897886 2764.630947 2019.255044 1.671115166 2.006979626 2.015697507 2.126779503 2.515093869 2.428399573 1.91603397 2.470662585 1.369134105 1 10.97960743 -8.43944196 4.386073221 1.007874802 2.146108426 0.703416131 0.254092981 0.110768188 3.618522389 0.254533867 0.066567861 3.64E-09 8.43944196 1.138233624 CRS(ph)PGMLEPLGSSR ddPTM_A459_MK2206_30min_R1 3 CRSPGMLEPLGSSR 14 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 CRS(0.996)PGMLEPLGS(0.004)SR;CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR 128.74 0.0025939 117732000 3724.86 4334.14 4195.49 3898.72 4056.59 4284.94 4701.66 4202.5 2946.39 2400.14 TRUE FALSE 3408.041097 4051.986698 3910.711828 4199.00009 3895.00743 4527.5496 4388.02084 4165.757986 3252.677784 2697.487463 1.263413137 1.502133653 1.449760891 1.556633774 1.44393903 1.678432119 1.626706667 1.544310416 1.205817572 1 11.39740054 -8.447802338 3.143293511 1.004182916 1.515025072 0.707618302 0.10789141 0.12484068 2.491341011 0.10798434 0.028827239 3.57E-09 8.447802338 0.510842156 CRS(ph)PGMLEPLGSSR ddPTM_A459_MK2206_30min_R2 3 CRSPGMLEPLGSSR 14 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR 133.04 0.00041733 400531000 17143.4 35880 40071 29962 39842 36787 37692 31738.1 39763.4 30318.8 TRUE FALSE 18455.91189 34098.25137 41406.94714 27514.00876 38277.60289 38186.95506 32742.99512 35886.37864 43221.94866 29329.50004 0.629261046 1.162592316 1.411784963 0.938100163 1.30508883 1.301998159 1.11638436 1.223559167 1.473668102 1 14.84006486 -4.768679676 4.63834645 1.225197457 0.586764882 0.550605743 0.159391174 0.13399547 6.676854576 0.037947959 0.281224564 1.70E-05 4.768679676 -0.638432575 CS(ph)NEAVLVATFHPTDPT(ph)VLITCGK ddPTM_A459_MK2206_30min_R1 1 CSNEAVLVATFHPTDPTVLITCGK 24 0 A0A0C4DGQ7;K7EIK7;O95834;K7EKU5;C9JRL6;O95834-2;O95834-3 A0A0C4DGQ7;C9JRL6 EML2 Echinoderm microtubule-associated protein-like 2 2 CS(0.99)NEAVLVAT(0.01)FHPT(0.003)DPT(0.622)VLIT(0.375)CGK 59.226 0.032171 4131500 1454.5 1997.5 2104.6 1724.9 1292.6 1407.9 1674.4 1626.8 1836.4 1773.9 TRUE FALSE 1330.787137 1867.462387 1961.745616 1857.752097 1241.113005 1487.614081 1562.703831 1612.577059 2027.300352 1993.664124 0.667508193 0.936698596 0.983990027 0.931828022 0.622528634 0.746170864 0.783835056 0.808850919 1.016871562 1 10.96120666 -8.2610239 24.94885098 1.008435801 0.814976068 0.3400398 0.110319093 45.33680468 2722876.219 0.093489212 0.030369292 5.48E-09 8.2610239 -0.193459733 CS(ph)PTVAFVEFPSSPQLK ddPTM_A459_MK2206_30min_R1 1 CSPTVAFVEFPSSPQLK 17 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 CS(0.996)PT(0.004)VAFVEFPSSPQLK 196.45 8.76E-08 17390000 3391.7 3462.6 3588.3 3316.2 3775 3022.4 2680.3 3120.4 2734.7 2465.6 TRUE FALSE 3103.218104 3237.184111 3344.736194 3571.614299 3624.633756 3193.525676 2501.502077 3093.118672 3018.981851 2771.057142 1.119867958 1.168212687 1.207025342 1.288899548 1.308032845 1.152457532 0.902724826 1.116223345 1.08946936 1 11.43622075 -7.009647081 24.70200026 1.035475578 1.220037166 0.602440095 0.073274164 298.8542179 765236.5524 0.028228283 0.023515208 9.78E-08 7.009647081 0.184561588 CS(ph)TGSPSKDVTK ddPTM_A459_MK2206_30min_R1 1 CSTGSPSKDVTK 12 1 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 CS(0.938)T(0.043)GS(0.018)PSKDVT(0.001)K 153 0.0022819 11066000 2181.1 2498.6 2337.7 2247.8 2003.1 1717.6 1914.9 2143.4 1689.3 1769.1 TRUE FALSE 1995.585992 2335.940686 2179.023437 2420.925945 1923.312285 1814.849028 1787.160515 2124.66048 1864.90878 1988.269464 1.003679847 1.174861219 1.095939699 1.21760455 0.967329791 0.912778203 0.898852267 1.068597853 0.937955752 1 10.95729758 -6.292794587 19.33758645 0.961837873 1.124789462 0.565483425 0.068154433 30.58296812 18860.8197 0.020823766 0.023623179 5.10E-07 6.292794587 0.162951588 CSATPSAQVKPIVS(ph)ASPPSR ddPTM_A459_MK2206_30min_R1 1 CSATPSAQVKPIVSASPPSR 20 1 Q96EV2;H0Y3K4 Q96EV2 RBM33 RNA-binding protein 33 1 CSATPSAQVKPIVS(0.707)AS(0.264)PPS(0.029)R 91.733 0.00082601 32507000 3297.4 3068.8 3492.6 3441.8 3283.6 2966.3 3413.7 3914.4 3057 3037.9 TRUE FALSE 3016.938815 2869.020562 3255.532043 3706.888032 3152.807259 3134.249343 3185.978302 3880.176813 3374.78609 3414.257987 0.883629423 0.840305734 0.953510852 1.085708241 0.923423851 0.917988434 0.933139298 1.136462689 0.988439099 1 11.73735636 -2.573368825 0.37090458 1.015422896 5.06E-13 0.30019939 0.071466263 39.23578046 1.128904671 0.061509622 24.89296017 0.002670737 2.573368825 -1.015422896 CSATPSAQVKPIVSAS(ph)PPSR ddPTM_A459_MK2206_30min_R1 1 CSATPSAQVKPIVSASPPSR 20 1 Q96EV2;H0Y3K4 Q96EV2 RBM33 RNA-binding protein 33 1 CSATPSAQVKPIVS(0.012)AS(0.886)PPS(0.101)R 133.17 7.47E-05 37207000 3152.6 3018.6 3262.2 2871.7 3246.3 3140.6 3155.4 2943.8 2783.3 2886.9 TRUE FALSE 2884.454815 2822.088591 3040.770953 3092.878832 3116.992997 3318.418058 2944.909023 2918.062667 3072.633995 3244.550967 0.889015104 0.869793269 0.937193154 0.953253274 0.960685478 1.022766507 0.907647639 0.899373348 0.947013632 1 11.66380311 -5.363206521 3.941668998 0.952192261 0.879282656 0.419177299 0.035188834 0.235756579 6.450862389 0.010009057 0.02284667 4.33E-06 5.363206521 -0.072909605 CSATPSAQVKPIVSAS(ph)PPSR ddPTM_A459_MK2206_30min_R2 2 CSATPSAQVKPIVSASPPSR 20 1 Q96EV2;H0Y3K4 Q96EV2 RBM33 RNA-binding protein 33 1 CSATPSAQVKPIVS(0.218)AS(0.762)PPS(0.02)R;CSATPSAQVKPIVS(0.389)AS(0.595)PPS(0.015)R 85.51 0.001323 100320000 116999 131911 134368 134246 133703 109113 120703 117706 115874 159482 TRUE FALSE 125956.5334 125360.4916 138847.7621 123277.6724 128453.1484 113265.3717 104854.5511 133090.5783 125952.5111 154278.1154 0.816425149 0.812561725 0.899983525 0.799061306 0.83260771 0.734163568 0.679646305 0.862666607 0.816399077 1 17.2351739 -9.023801293 1.582194119 0.99987202 0.80258072 0.501052488 0.058281055 2.721166954 7.650478043 0.060219967 0.017215356 9.47E-10 9.023801293 -0.197291299 CSDAAGYPHATHDLEGPPLDAYSIQGQHT(ph)ISPLDLAK ddPTM_A459_MK2206_30min_R2 3 CSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAK 37 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 CSDAAGYPHATHDLEGPPLDAY(0.093)S(0.312)IQGQHT(0.558)IS(0.036)PLDLAK;CSDAAGYPHATHDLEGPPLDAY(0.039)S(0.042)IQGQHT(0.459)IS(0.459)PLDLAK;CSDAAGYPHATHDLEGPPLDAY(0.033)S(0.107)IQGQHT(0.753)IS(0.107)PLDLAK 56.832 0.00011879 74891000 106385 170866 137962 196940 195448 184622 220046 139110 173698 213868 TRUE FALSE 114529.9174 162381.0429 142561.5842 180849.372 187773.7295 191647.9196 191153.6959 157292.1546 188805.9381 206889.5047 0.553580123 0.784868441 0.689071127 0.874135072 0.907603939 0.926329829 0.923941 0.760271309 0.912593118 1 17.65850093 -4.082542731 0.598886498 0.902518521 1.47E-21 0.685547275 0.072000285 4.776797354 0.701571095 0.03481971 3.584696638 8.27E-05 4.082542731 -0.902518521 CSDVS(ph)ELSSSPPGPYHQEPYVCKPEER ddPTM_A459_MK2206_30min_R1 1 CSDVSELSSSPPGPYHQEPYVCKPEER 27 1 Q9Y478;F5H610;F5H2X8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 CS(0.007)DVS(0.468)ELS(0.207)S(0.159)S(0.159)PPGPYHQEPYVCKPEER 127.74 3.73E-12 60292000 1863.3 1399.7 1817.9 1394.4 2694 2298 2469.6 2017 1284.9 1358.9 TRUE FALSE 1704.81655 1308.579276 1694.506013 1501.79693 2586.692275 2428.110774 2304.85749 1999.365582 1418.469953 1527.250791 1.116264965 0.856820165 1.109513921 0.983333542 1.693691888 1.58985727 1.509154556 1.309127219 0.928773428 1 10.57672127 -6.223245287 24.92795232 1.374997671 1.011723589 0.302422342 0.235605591 633.3008813 413333.2205 0.072017629 0.092972495 5.98E-07 6.223245287 -0.363274082 CSDVSELS(ph)SSPPGPYHQEPYVCKPEER ddPTM_A459_MK2206_30min_R1 1 CSDVSELSSSPPGPYHQEPYVCKPEER 27 1 Q9Y478;F5H610;F5H2X8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 CS(0.023)DVS(0.283)ELS(0.573)S(0.042)S(0.042)PPGPY(0.036)HQEPYVCKPEER 71.634 0.00026231 45139000 372.12 383.6 561.19 348.86 449.8 310.36 578.96 659.63 396.1 316.86 TRUE FALSE 340.4692399 358.6275703 523.0979864 375.7292576 431.8835135 327.932315 540.3386348 653.8629245 437.2760125 356.115009 0.956065404 1.007055477 1.468901824 1.055078411 1.212764143 0.920860696 1.517314972 1.836100439 1.22790672 1 8.476199431 -7.277149732 24.69945728 1.465005601 1.11845353 0.226742773 0.250288044 880.1325857 1383718.119 0.102031383 0.069057427 5.28E-08 7.277149732 -0.346552072 CSDVSELS(ph)SSPPGPYHQEPYVCKPEER ddPTM_A459_MK2206_30min_R2 1 CSDVSELSSSPPGPYHQEPYVCKPEER 27 1 Q9Y478;F5H610;F5H2X8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 CS(0.005)DVS(0.193)ELS(0.548)S(0.122)S(0.122)PPGPY(0.009)HQEPYVCKPEER 68.406 0.00049219 33686000 23253 30032 23179 30140 28262 29051 30287 21064 26070 26117 TRUE FALSE 25033.26756 28540.65455 23951.77629 27677.46559 27152.29187 30156.55616 26310.28052 23817.13712 28337.52148 25264.80443 0.990835596 1.129660617 0.948029357 1.095494947 1.074708176 1.19361922 1.041380732 0.942700237 1.121620456 1 14.62484139 -9.261870689 0.633617044 0.999484186 1.06335318 0.040869726 0.077500882 9.974787557 5.634983341 0.128919151 0.031048286 5.47E-10 9.261870689 0.063868994 CSDVSELSS(ph)SPPGPYHQEPYVCKPEER ddPTM_A459_MK2206_30min_R1 1 CSDVSELSSSPPGPYHQEPYVCKPEER 27 1 Q9Y478;F5H610;F5H2X8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 CS(0.002)DVS(0.037)ELS(0.05)S(0.738)S(0.17)PPGPY(0.003)HQEPYVCKPEER 84.025 3.06E-05 37351000 1576.3 1202.7 1384.2 1347.4 1770.3 845.08 1135.7 1552.6 1370.9 1412.5 TRUE FALSE 1442.227408 1124.404011 1290.244361 1451.176981 1699.785202 892.9276993 1059.939525 1539.025782 1513.409961 1587.491164 0.908494762 0.708289934 0.812756877 0.914132321 1.070736796 0.562477272 0.667682157 0.969470456 0.953334416 1 10.63253285 -7.8454893 13.77976291 0.971356111 0.807784711 0.245860856 0.134711501 1.485554999 238.9846497 0.078422026 0.037669479 1.43E-08 7.8454893 -0.163571401 CSDVSELSS(ph)SPPGPYHQEPYVCKPEER ddPTM_A459_MK2206_30min_R2 4 CSDVSELSSSPPGPYHQEPYVCKPEER 27 1 Q9Y478;F5H610;F5H2X8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 CSDVS(0.001)ELS(0.025)S(0.485)S(0.485)PPGPY(0.003)HQEPYVCKPEER;CSDVS(0.001)ELS(0.118)S(0.439)S(0.439)PPGPY(0.004)HQEPYVCKPEER;CSDVSELS(0.036)S(0.481)S(0.481)PPGPY(0.002)HQEPYVCKPEER;CSDVS(0.004)ELS(0.083)S(0.456)S(0.456)PPGPY(0.002)HQEPYVCKPEER 92.8 5.71E-06 391106000 123839 136093 128418 139696 161560 119781 154093 116681 141206 153859 TRUE FALSE 133320.2091 129334.8195 132699.392 128282.3899 155216.3426 124339.3499 133860.404 131931.6073 153487.8426 148838.5934 0.895736825 0.868960238 0.891565749 0.861889292 1.042850104 0.835397238 0.899366226 0.886407243 1.031236853 1 17.18338914 -8.26031145 24.983053 1.015618438 0.898218251 0.444924716 0.052649578 88.44724954 1959174.309 0.039660535 0.01311138 5.49E-09 8.26031145 -0.117400187 CSGPGLS(ph)PGMVR ddPTM_A459_MK2206_30min_R1 4 CSGPGLSPGMVR 12 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR 169.58 0.00034175 609690000 12839.7 12132.6 13302 10445.8 11618.8 10947.9 12818.8 12130.3 10991.9 10024.3 TRUE FALSE 11747.61609 11342.76553 12399.0973 11250.33733 11155.99859 11567.76064 11963.68124 12024.24607 12134.54734 11266.18596 1.042732308 1.006797293 1.100558551 0.998593256 0.990219639 1.026768125 1.061910506 1.067286312 1.077076783 1 13.45971157 -7.255693542 22.88643785 1.057175594 1.026962553 0.094165118 0.034664597 300.1868066 1195693.297 0.013620268 0.010222379 5.55E-08 7.255693542 -0.030213041 CSGPGLS(ph)PGMVR ddPTM_A459_MK2206_30min_R2 5 CSGPGLSPGMVR 12 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR 154.23 0.00044769 530586000 677688 906220 731499 820260 792225 741511 908586 656567 698681 801700 TRUE FALSE 729572.3143 861218.4326 755886.8116 753242.1341 761118.2659 769729.7207 789287.5668 742382.5612 759451.0105 775540.5947 0.940727435 1.110474988 0.974657957 0.971247849 0.981403515 0.992507325 1.017725664 0.957245264 0.979253718 1 19.56484277 CSLHSAS(ph)PASVR ddPTM_A459_MK2206_30min_R1 2 CSLHSASPASVR 12 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 CS(0.002)LHS(0.077)AS(0.903)PAS(0.019)VR;CS(0.001)LHS(0.07)AS(0.797)PAS(0.133)VR 126.5 0.0027261 15380600 9705.3 5225.7 7138.6 4507.1 10940.8 10798.7 11801.7 8892.6 4915.8 6067 TRUE FALSE 8879.81327 4885.50598 6654.051721 4854.237623 10505.00477 11410.11306 11014.43013 8814.852936 5426.815001 6818.625764 1.302287818 0.716494225 0.975864045 0.711908498 1.540633719 1.673374292 1.615344574 1.292760923 0.795881045 1 12.73526529 -6.263702397 24.99999976 1.366773175 0.915144428 0.28708003 0.297703106 242.567484 2679685.813 0.093850745 0.111601694 5.45E-07 6.263702397 -0.451628747 CSLHSAS(ph)PASVR ddPTM_A459_MK2206_30min_R2 2 CSLHSASPASVR 12 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 CSLHS(0.009)AS(0.991)PASVR;CSLHS(0.017)AS(0.635)PAS(0.348)VR 151.16 0.00052989 15503800 32483 52794 36604 65711 71311 67491 63895 41049 52144 49968 TRUE FALSE 34969.92346 50172.32673 37824.35909 60342.2011 68510.97183 70059.4173 55505.50975 46414.24524 56679.39087 48337.54825 0.723452569 1.037957624 0.782504708 1.24835047 1.417344783 1.449378792 1.14828972 0.960210994 1.172574798 1 15.56085668 -5.766592821 24.99918488 1.215153075 0.866970209 0.486018031 0.16473727 114.1677878 553827.8556 0.049875733 0.076575402 1.71E-06 5.766592821 -0.348182866 CSPTVAFVEFPSS(ph)PQLK ddPTM_A459_MK2206_30min_R1 1 CSPTVAFVEFPSSPQLK 17 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 CSPTVAFVEFPS(0.23)S(0.77)PQLK 150.12 0.00027077 6736500 2471.1 2375.5 2167.2 1742.1 1458 1578.9 2218.8 1906.5 2383.3 2290.8 TRUE FALSE 2260.919969 2220.854518 2020.096502 1876.276844 1399.924773 1668.295954 2070.7879 1889.831672 2631.052564 2574.601599 0.878163041 0.862601235 0.784624892 0.728763955 0.543744233 0.647982179 0.804313919 0.73402878 1.021926097 1 11.33013349 -8.26133059 24.99973154 1.010963082 0.744156566 0.558811503 0.093401268 7.863096299 1808125.154 0.083163162 0.026814772 5.48E-09 8.26133059 -0.266806516 CSPTVAFVEFPSS(ph)PQLK ddPTM_A459_MK2206_30min_R2 2 CSPTVAFVEFPSSPQLK 17 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 CSPTVAFVEFPS(0.259)S(0.741)PQLK;CSPTVAFVEFPS(0.266)S(0.734)PQLK 195.23 9.29E-08 16521900 100556 94218 91276 83615 90125 66550 82458 63246 55943 89235 TRUE FALSE 108254.6447 89539.27113 94319.09628 76783.38703 86586.23966 69082.60688 71631.16555 71512.46936 60808.82102 86323.26926 1.254060992 1.03725533 1.092626555 0.889486551 1.003046344 0.800277926 0.829801352 0.828426332 0.704431395 1 16.39746188 -5.069020206 0.565276549 0.818475931 1.395469962 0.664489528 0.089914772 1.689390188 0.516107034 0.049255844 0.613180344 8.53E-06 5.069020206 0.57699403 CSS(ph)PTVGPPPLPQK ddPTM_A459_MK2206_30min_R1 2 CSSPTVGPPPLPQK 14 0 E9PI79;H0YDJ2;E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 E9PI79;H0YDJ2 PPFIBP2 Liprin-beta-2 1 CS(0.125)S(0.843)PT(0.032)VGPPPLPQK;CS(0.165)S(0.818)PT(0.017)VGPPPLPQK 198.29 9.52E-05 28728000 6412.5 7123.9 7774.8 6663.7 6647.1 6595.6 6693.4 6814.9 5776.7 5660.2 TRUE FALSE 5867.083202 6660.132815 7247.068238 7176.939329 6382.331932 6969.037172 6246.895499 6755.318048 6377.208637 6361.428308 0.922290234 1.046955572 1.139220296 1.128196213 1.003285995 1.095514535 0.98199574 1.061918444 1.002480627 1 12.63513501 -7.261893636 24.99929742 1.016758575 1.060183936 0.105113452 0.061871064 107.116426 5894623.74 0.025768211 0.018645249 5.47E-08 7.261893636 0.043425361 CSS(ph)PTVGPPPLPQK ddPTM_A459_MK2206_30min_R2 2 CSSPTVGPPPLPQK 14 0 E9PI79;H0YDJ2;E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 E9PI79;H0YDJ2 PPFIBP2 Liprin-beta-2 1 CS(0.051)S(0.779)PT(0.17)VGPPPLPQK;CS(0.123)S(0.793)PT(0.085)VGPPPLPQK 117.7 0.0024659 39037000 100705 123099 106856 122771 130198 106388 156209 114189 107243 138286 TRUE FALSE 108415.0522 116986.0827 110418.5257 112740.2166 125085.7723 110436.6699 135698.5707 129113.8944 116570.8023 133773.7391 0.810435986 0.874507085 0.825412569 0.842767925 0.935054766 0.825548202 1.01438871 0.965166222 0.871402736 1 17.02943541 -6.779162887 0.988331969 0.957040775 0.837887268 0.469372169 0.052683435 0.495240705 1.037646939 0.030246319 0.027094946 1.66E-07 6.779162887 -0.119153507 CSSCEPFPDGATNNLS(ph)R ddPTM_A459_MK2206_30min_R2 1 CSSCEPFPDGATNNLSR 17 0 O95999 O95999 BCL10 B-cell lymphoma/leukemia 10 1 CSSCEPFPDGAT(0.022)NNLS(0.978)R 91.932 0.015717 0 11213 12332 15145 14572 13011 14063 15357 11119 12860 14135 TRUE FALSE 12071.4759 11719.61081 15649.92674 13381.42099 12500.12276 14598.17732 13340.60745 12572.29148 13978.53955 13673.77611 0.882819479 0.857086639 1.144521207 0.978619284 0.914167576 1.067603945 0.975634481 0.919445468 1.02228817 1 13.73912409 CSVCPDYDLCS(ph)VCEGK ddPTM_A459_MK2206_30min_R2 2 CSVCPDYDLCSVCEGK 16 0 Q13501;Q13501-2;E7EMC7;E9PFW8;C9JRJ8;E3W990 Q13501 SQSTM1 Sequestosome-1 1 CSVCPDYDLCS(1)VCEGK;CSVCPDY(0.001)DLCS(0.999)VCEGK 138.81 0.00040372 14181000 73224 77764 87926 69930 72561 65681 82345 52739 65417 84350 TRUE FALSE 78830.08574 73902.35284 90857.40896 64216.49531 69711.89055 68180.53648 71533.00259 59632.16838 71106.85241 81597.66641 0.9660826 0.90569199 1.113480482 0.786989361 0.854336816 0.835569686 0.876655004 0.730807277 0.871432426 1 16.31624027 -5.780891492 24.99999966 0.840197513 0.986145794 0.392843301 0.081209486 217.996753 280170.3156 0.021694533 0.032230558 1.66E-06 5.780891492 0.145948281 CSVGTYNS(ph)SGAYR ddPTM_A459_MK2206_30min_R2 1 CSVGTYNSSGAYR 13 0 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 CSVGT(0.022)YNS(0.93)S(0.048)GAYR 93.228 0.021697 0 3030.9 3120.7 4324.3 4189.7 4276.6 1311.2 3648 3011.6 4008.5 3989 TRUE FALSE 3262.948034 2965.730576 4468.470004 3847.388108 4108.679196 1361.098635 3169.013218 3405.22646 4357.152084 3858.839257 0.845577599 0.768555096 1.157982934 0.997032489 1.064744842 0.352722294 0.821234834 0.882448382 1.12913542 1 11.91395123 -8.187473552 6.278035595 1.063304343 0.860132147 0.134791906 0.206287395 0.471960363 31.76664317 0.153344712 0.056183969 6.49E-09 8.187473552 -0.203172196 CSVS(ph)LSNVEAR ddPTM_A459_MK2206_30min_R2 1 CSVSLSNVEAR 11 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 CS(0.003)VS(0.91)LS(0.087)NVEAR 94.547 0.022107 4320300 12026 15405 12093 15596 7016.2 8344.2 9962.5 12459 6871.6 8269.8 TRUE FALSE 12946.71981 14640.0101 12496.17458 14321.75691 6740.708734 8661.744378 8654.411783 14087.43408 7469.279347 7999.957103 1.618348654 1.830011075 1.562030199 1.790229213 0.84259311 1.082723853 1.081807274 1.760938702 0.933664925 1 12.96577655 -6.246788734 24.99602212 1.151532667 1.699564226 0.575184633 0.244457023 642.2137069 1095704.916 0.073353681 0.09427645 5.67E-07 6.246788734 0.54803156 CT(ph)NSEVT(ph)VQPSPYLS(ph)YRLPK ddPTM_A459_MK2206_30min_R2 1 CTNSEVTVQPSPYLSYRLPK 20 1 X6RA30;O75794 X6RA30 CDC123 Cell division cycle protein 123 homolog 3 CT(0.706)NS(0.295)EVT(0.773)VQPS(0.221)PY(0.018)LS(0.971)Y(0.016)RLPK 69.845 0.036025 0 18843 16699 21509 20709 18145 13810 20343 16217 16265 21002 TRUE FALSE 20285.63457 15869.75194 22226.09932 19017.00846 17432.53613 14335.54923 17671.93966 18336.61758 17679.7003 20316.70646 0.998470624 0.781118336 1.093981417 0.936028115 0.858039474 0.705603994 0.869823054 0.902538884 0.870205037 1 14.31037893 -4.396213198 9.634111448 0.888130294 2.830939379 0.090853621 0.101843652 28488.60993 63140.20265 0.026183329 1124327.938 4.02E-05 4.396213198 1.942809085 CTELNQAWSS(ph)LGK ddPTM_A459_MK2206_30min_R1 1 CTELNQAWSSLGK 13 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 1 CTELNQAWS(0.387)S(0.613)LGK 93.716 0.016744 14212000 2002.9 2204.1 2273.4 2005.8 2249.4 2117.3 2151.4 2380.8 2140.6 2006.7 TRUE FALSE 1832.542837 2060.612689 2119.087942 2160.287064 2159.801635 2237.179696 2007.884031 2359.984917 2363.12303 2255.305146 0.812547624 0.913673564 0.939601431 0.957869079 0.957653841 0.991963194 0.89029373 1.046414904 1.04780634 1 11.13910693 -2.627928467 0.369013777 1.00637361 3.37E-20 0.640810189 0.040997781 20.36147196 0.605771303 0.034774528 12.61594283 0.002355437 2.627928467 -1.00637361 CTELNQAWSS(ph)LGK ddPTM_A459_MK2206_30min_R2 3 CTELNQAWSSLGK 13 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 1 CTELNQAWS(0.274)S(0.726)LGK;CTELNQAWS(0.062)S(0.938)LGK;CTELNQAWS(0.005)S(0.995)LGK 260.97 9.39E-30 13879900 83262 90909 78368 87378 78583 62084 83603 68013 58363 81288 TRUE FALSE 89636.60274 86394.59125 80980.75001 80238.93789 75497.43657 64446.65012 72625.82567 76902.53262 63439.30824 78635.57922 1.139898804 1.098670501 1.029823279 1.020389736 0.960092586 0.819560951 0.923574626 0.977961037 0.806750696 1 16.2628946 -5.786591988 1.051202915 0.905114013 1.132978901 0.653521508 0.059869224 0.365984224 0.778520368 0.022846134 0.064044167 1.63E-06 5.786591988 0.227864887 CTGDFSPS(ph)PEK ddPTM_A459_MK2206_30min_R1 2 CTGDFSPSPEK 11 0 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 CTGDFS(0.008)PS(0.992)PEK;CTGDFS(0.001)PS(0.999)PEK 154.67 0.00053883 30234000 12179.1 15214 14998.6 13413.1 10583.1 9502.8 11024.3 11919.1 13838.6 12855.5 TRUE FALSE 11143.20359 14223.56583 13980.53682 14446.17929 10161.55272 10040.84032 10288.88906 11814.89257 15277.17199 14448.13639 0.771255426 0.98445678 0.967635994 0.999864543 0.703312347 0.694957471 0.712125687 0.817745088 1.057380106 1 13.8185958 -4.475313366 13.90847919 0.866584804 0.333991424 0.04752944 0.133576898 2091305.133 21064483.39 0.036153354 28277511.32 3.35E-05 4.475313366 -0.532593379 CTGDFSPS(ph)PEK ddPTM_A459_MK2206_30min_R2 4 CTGDFSPSPEK 11 0 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 CTGDFSPS(1)PEK;CTGDFS(0.118)PS(0.881)PEK;CTGDFS(0.017)PS(0.983)PEK;CTGDFS(0.059)PS(0.941)PEK 148.13 0.00065431 64178300 341517 328618 326614 277376 324307 236506 393189 269268 268545 345601 TRUE FALSE 367663.8041 312299.308 337503.1477 254713.4935 311573.0777 245506.4016 341562.812 304462.2521 291902.5587 334324.0677 1.099722813 0.934121525 1.009508978 0.76187603 0.931949291 0.734336607 1.021651879 0.91068003 0.873112608 1 18.35088769 -4.319823733 1.175856203 0.893255592 1.445507942 0.28686766 0.0919484 4.974252566 2.782060543 0.026695355 4.38439632 4.79E-05 4.319823733 0.55225235 CTGGEVGAT(ph)SALAPK ddPTM_A459_MK2206_30min_R2 1 CTGGEVGATSALAPK 15 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 1 CTGGEVGAT(0.5)S(0.5)ALAPK 92.457 0.031535 3885700 27599 22258 22174 26136 22348 19054 32838 20158 15739 26639 TRUE FALSE 29712.00066 21152.70009 22913.27009 24000.6052 21470.50523 19779.11332 28526.33115 22792.71981 17107.94977 25769.77161 1.152978812 0.820833821 0.889153014 0.931347222 0.833166299 0.767531572 1.106968722 0.884475041 0.663876655 1 14.65339213 -4.754063355 24.99063034 0.878271838 1.152979298 0.338199404 0.115609794 311.7514479 1056152.658 0.028403347 0.288242811 1.76E-05 4.754063355 0.27470746 CTLPEHES(ph)PSQDISDACEAESTER ddPTM_A459_MK2206_30min_R1 4 CTLPEHESPSQDISDACEAESTER 24 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 CT(0.007)LPEHES(0.899)PS(0.094)QDISDACEAESTER;CT(0.001)LPEHES(0.986)PS(0.013)QDISDACEAESTER;CT(0.001)LPEHES(0.998)PS(0.001)QDISDACEAESTER;CT(0.001)LPEHES(0.898)PS(0.101)QDISDACEAESTER 145.6 1.40E-09 129822000 15821.6 15852.6 15914.3 14131.8 17782.3 15212.6 16602.5 14770.8 12162.8 12983.1 TRUE FALSE 14475.88984 14820.59286 14834.08166 15220.23368 17073.99334 16073.92427 15494.97752 14641.66045 13427.16659 14591.54445 0.992073861 1.015697339 1.016621764 1.04308586 1.170129276 1.101591701 1.061914835 1.003434592 0.920201877 1 13.83284497 -7.939358271 3.749012247 0.959609756 1.059427541 0.374226359 0.050882596 0.255936407 7.200560652 0.03625166 0.01526066 1.15E-08 7.939358271 0.099817785 CTLPEHES(ph)PSQDISDACEAESTER ddPTM_A459_MK2206_30min_R2 4 CTLPEHESPSQDISDACEAESTER 24 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 CTLPEHES(0.938)PS(0.062)QDISDACEAESTER;CTLPEHES(0.998)PS(0.002)QDISDACEAESTER;CT(0.004)LPEHES(0.933)PS(0.062)QDIS(0.001)DACEAESTER;CTLPEHES(0.996)PS(0.003)QDISDACEAESTER 140.48 2.78E-08 198175000 159792 195253 173366 213855 194309 205311 199670 156944 170099 188463 TRUE FALSE 172025.7984 185557.0199 179145.9359 196382.3624 186679.4523 213124.254 173453.0892 177457.1197 184893.9036 182313.4677 0.943571534 1.017791073 0.982625903 1.077168708 1.02394768 1.168998959 0.951400307 0.973362648 1.014153841 1 17.47606161 -4.098747555 1.260782504 1.028193039 0.657109212 0.143641721 0.058396817 14.0624665 5.621386917 0.01775185 10.30917768 7.97E-05 4.098747555 -0.371083827 CVACQNPDKPS(ph)PSTSVPAPASFK ddPTM_A459_MK2206_30min_R2 1 CVACQNPDKPSPSTSVPAPASFK 23 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 CVACQNPDKPS(0.916)PS(0.056)T(0.012)S(0.016)VPAPASFK 89.181 0.00010757 8186700 83584 83384 90957 79518 89145 72711 93556 55038 65477 92286 TRUE FALSE 89983.25531 79243.27181 93989.46098 73021.12503 85644.71938 75478.06806 81271.98482 62231.65557 71172.0711 89274.71538 1.007936625 0.88763399 1.052811657 0.81793736 0.959339036 0.845458512 0.910358375 0.697080414 0.797225405 1 16.44596401 -6.523303976 0.911107644 0.825139955 0.965139884 0.190843239 0.094417563 0.82111347 1.48989521 0.050247025 0.060108799 3.00E-07 6.523303976 0.139999928 CVACQNPDKPSPST(ph)SVPAPASFK ddPTM_A459_MK2206_30min_R2 1 CVACQNPDKPSPSTSVPAPASFK 23 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 CVACQNPDKPS(0.176)PS(0.176)T(0.472)S(0.176)VPAPASFK 79.029 0.00091776 8477600 82708 74019 79525 77812 80518 62105 82441 63351 67956 83167 TRUE FALSE 89040.18807 70343.32409 82176.32381 71454.51069 77356.45875 64468.44929 71616.39767 71631.19322 73866.69004 80453.2676 1.10673178 0.874337689 1.021416858 0.888149268 0.961507979 0.801315487 0.890161454 0.890345356 0.918131634 1 16.2958634 -3.246798234 2.004099856 0.911065028 71.87941425 0.440534789 0.062545322 479.4033307 6.614027974 0.016193558 155229.0441 0.000566502 3.246798234 70.96834922 CVGAELEYDS(ph)EHSDWHGFD ddPTM_A459_MK2206_30min_R1 1 CVGAELEYDSEHSDWHGFD 19 0 H7BYU9;Q9GZN8;Q9GZN8-2 H7BYU9 C20orf27 UPF0687 protein C20orf27 1 CVGAELEYDS(0.888)EHS(0.112)DWHGFD 137.13 0.00010944 6509400 1590.2 1263.6 1555.3 1142.8 1735.3 1520 1632.5 1456.3 1214.1 1068.3 TRUE FALSE 1454.94514 1181.33941 1449.730569 1230.818654 1666.179326 1606.061086 1523.598904 1443.567723 1340.31004 1200.649069 1.211798832 0.983917317 1.207455706 1.025127729 1.38773216 1.33766071 1.268979373 1.202322777 1.116321225 1 10.22959882 -4.441111785 22.79239595 1.182751354 3.333954834 0.000570072 0.132903671 6026.432588 2227994.457 0.033712292 219006.178 3.62E-05 4.441111785 2.15120348 CVGAELEYDS(ph)EHSDWHGFD ddPTM_A459_MK2206_30min_R2 1 CVGAELEYDSEHSDWHGFD 19 0 H7BYU9;Q9GZN8;Q9GZN8-2 H7BYU9 C20orf27 UPF0687 protein C20orf27 1 CVGAELEYDS(0.989)EHS(0.011)DWHGFD 108.14 0.0012004 0 7044.1 10182 7990.1 8706.3 11210 11077 10512 8905.3 8716.1 9312.2 TRUE FALSE 7583.401712 9676.376686 8256.485946 7994.96744 10769.83907 11498.543 9131.761773 10069.25329 9474.210623 9008.343677 0.84181976 1.074157141 0.916537628 0.88750693 1.19554043 1.27643254 1.01370042 1.117769664 1.05171505 1 13.13704615 -6.256556401 24.99972821 1.118668848 0.939339935 0.454902446 0.095538155 397.4233743 2034715.924 0.028999908 0.036267164 5.54E-07 6.256556401 -0.179328913 CVGAELEYDSEHS(ph)DWHGFD ddPTM_A459_MK2206_30min_R1 1 CVGAELEYDSEHSDWHGFD 19 0 H7BYU9;Q9GZN8;Q9GZN8-2 H7BYU9 C20orf27 UPF0687 protein C20orf27 1 CVGAELEYDS(0.376)EHS(0.624)DWHGFD 117.84 0.00030172 5596600 1819.7 1402 1326.6 1289.3 2075.1 2090 1750.2 1642.5 1247.6 1241.5 TRUE FALSE 1664.924959 1310.729545 1236.554088 1388.602109 1992.444373 2208.333994 1633.447351 1628.139796 1377.292485 1395.306393 1.193232517 0.939384749 0.886224054 0.995195117 1.427961904 1.582687505 1.170672879 1.166869015 0.98708964 1 10.44636624 -6.208264731 15.1290633 1.246298372 0.990524759 0.24591294 0.184565903 6.429938393 1828.050735 0.058171072 0.075096433 6.19E-07 6.208264731 -0.255773613 CVMDDDNEVRDR ddPTM_A459_MK2206_30min_R1 2 CVMDDDNEVRDR 12 1 Q9Y678 Q9Y678 COPG1 Coatomer subunit gamma-1 0 ; 127.51 0.0069214 20518200 3618.9 3765.5 3995.8 4270.7 4810.6 3731.2 4071.8 4601.5 2518.2 2143.8 FALSE TRUE 3311.093551 3520.365266 3724.576229 4599.630054 4618.983615 3942.45732 3800.177651 4561.269571 2779.975901 2409.390129 1.374245504 1.46110222 1.545858508 1.909043288 1.917075844 1.636288483 1.577236333 1.893122046 1.153808953 1 11.2344523 -8.402301259 5.002845472 1.008360175 1.664922735 0.631464165 0.18087779 0.146037579 4.953298658 0.189220582 0.049310783 3.96E-09 8.402301259 0.656562561 CVPCQCHGHSDR ddPTM_A459_MK2206_30min_R2 2 CVPCQCHGHSDR 12 0 O15230 O15230 LAMA5 Laminin subunit alpha-5 0 ; 91.961 0.01259 1247860 963.63 3126.77 1314.7 2924.19 2647.83 3067.7 4124.9 1455.33 1353.12 1592.93 FALSE TRUE 1037.406254 2971.499149 1358.531442 2685.274323 2543.86289 3184.443473 3583.295675 1645.546628 1470.811932 1540.952825 0.673223889 1.928351797 0.881617802 1.742606445 1.650837618 2.066541832 2.325376623 1.067876058 0.954482128 1 10.58960698 -5.785300113 24.99614497 1.60557478 1.237792848 0.087376646 0.524753755 578.9722671 606520.4906 0.15219267 0.225873749 1.64E-06 5.785300113 -0.367781932 CVS(ph)VQTDPTDEIPTKK ddPTM_A459_MK2206_30min_R1 1 CVSVQTDPTDEIPTKK 16 1 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;P18583-8 P18583-10 SON Protein SON 1 CVS(0.989)VQT(0.011)DPTDEIPTKK 68.49 0.024488 4577200 1558.8 1890.1 1825.2 1746.6 1836.3 1654.5 1780.1 1909.3 1720.1 1281.2 TRUE FALSE 1426.215874 1767.054146 1701.310509 1881.123435 1763.156283 1748.17636 1661.352777 1892.607191 1898.91055 1439.924729 0.990479465 1.227185082 1.181527392 1.306404007 1.224478091 1.214074823 1.153777516 1.314379255 1.318756816 1 10.49177768 -4.761190258 24.8043006 1.225512204 0.9904792 0.355225092 0.090114571 5.536326189 550036.8655 0.021125656 0.119546863 1.73E-05 4.761190258 -0.235033004 CVWS(ph)PLASPSTSILK ddPTM_A459_MK2206_30min_R2 2 CVWSPLASPSTSILK 15 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 CVWS(0.998)PLAS(0.002)PSTSILK;CVWS(0.996)PLAS(0.004)PSTSILK 112.24 0.003058 17496600 72132 59443 55995 55821 58358 57706 73431 43657 39994 51807 TRUE FALSE 77654.48138 56491.14706 57861.84535 51260.24574 56066.57169 59902.04227 63789.42149 49363.1198 43472.60583 50116.54183 1.549478047 1.127195632 1.154545849 1.022820886 1.118723871 1.195254901 1.27282169 0.9849666 0.867430278 1 15.61299925 -4.74154383 3.65299981 1.089455842 1.623661397 0.616051855 0.110794555 0.244200497 5.202211359 0.029793733 0.377164018 1.81E-05 4.74154383 0.534205555 DACDGHEIGR ddPTM_A459_MK2206_30min_R1 1 DACDGHEIGR 10 0 Q92621;U3KPX2 Q92621 NUP205 Nuclear pore complex protein Nup205 0 119.34 0.006649 0 961.42 954.19 835.07 741.49 1250.9 869.16 984.09 1126 739.61 1085.4 FALSE TRUE 879.6461804 892.0720576 778.387775 798.5996883 1201.074004 918.3710881 918.4431517 1116.155501 816.4951062 1219.867546 0.721099748 0.731285999 0.638092043 0.654660984 0.984593785 0.752844922 0.752903997 0.914980896 0.669330952 1 10.25250879 -6.220436926 24.99949837 0.832234773 0.686056705 0.365882855 0.101930942 595.5077039 363085.2671 0.028825321 0.037212969 6.02E-07 6.220436926 -0.146178067 DADAGDEDEESEEPR ddPTM_A459_MK2206_30min_R1 2 DADAGDEDEESEEPR 15 0 Q9NZT2-2;Q9NZT2;A0A087X028 Q9NZT2-2 OGFR Opioid growth factor receptor 0 ; 384.15 2.75E-238 6797800 1353.81 1214.21 1453.97 1132.58 1262.84 1018.73 1060.12 1066.3 1086.55 818.68 FALSE TRUE 1238.66135 1135.164708 1355.278567 1219.811508 1212.538409 1076.409612 989.4013291 1056.977452 1199.500761 920.1042591 1.346218473 1.23373487 1.472961954 1.325731835 1.317827188 1.169877872 1.075314367 1.148758351 1.303657438 1 9.845653535 -6.760865067 3.589885259 1.141338982 1.343402619 0.558454643 0.089400833 0.183628293 5.0471098 0.03182548 0.029699814 1.73E-07 6.760865067 0.202063637 DADAGDEDEESEEPR ddPTM_A459_MK2206_30min_R2 2 DADAGDEDEESEEPR 15 0 Q9NZT2-2;Q9NZT2;A0A087X028 Q9NZT2-2 OGFR Opioid growth factor receptor 0 ; 275.63 1.43E-44 7431200 9093.3 10546 8909.3 10977.2 9792.5 8472.3 9694.5 8200.8 8203.4 10389 FALSE TRUE 9789.49004 10022.30098 9206.331615 10080.32765 9407.997247 8794.719313 8421.600505 9272.672718 8916.916904 10050.00778 0.974077857 0.997243106 0.916052188 1.0030169 0.936118404 0.875095772 0.837969551 0.922653287 0.887254726 1 13.294909 -6.540269243 5.396487784 0.896109145 0.970456507 0.328869633 0.044906935 0.181957933 16.15137019 0.014257023 0.014711086 2.88E-07 6.540269243 0.074347362 DADDAVYELNGK ddPTM_A459_MK2206_30min_R2 2 DADDAVYELNGK 12 0 Q13247-3;Q13247;A0A590UJK4;A0A590UK01;A0A590UJP7;A0A590UK80;A0A0D9SEM4;Q13247-2;Q08170 Q13247-3;Q08170 SRSF6;SRSF4 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 4 0 ; 180.97 0.0014411 11098400 105888 84501 85945 87249 79134 70068 108037 75008 64155 90177 FALSE TRUE 113994.8667 80304.80322 88810.3634 80120.4776 76026.80154 72734.48684 93851.61212 84811.80314 69735.08593 87234.53188 1.306763093 0.920562093 1.018064309 0.918449104 0.871521861 0.833780904 1.075853909 0.972227412 0.799397721 1 16.41261172 -4.760090821 24.99696743 0.934983399 1.306763543 0.655762709 0.080929209 21.34982125 395594.4471 0.020342515 0.123316121 1.74E-05 4.760090821 0.371780144 DADLS(ph)PVNASIIK ddPTM_A459_MK2206_30min_R1 4 DADLSPVNASIIK 13 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 DADLS(1)PVNASIIK;DADLS(1)PVNASIIK;DADLS(0.999)PVNAS(0.001)IIK;DADLS(1)PVNASIIK 166.52 0.00032988 48265500 16940.8 15731.6 16279.7 12515.5 13473.4 14363 17494.9 13113.3 18562.2 19443.7 TRUE FALSE 15499.896 14707.46998 15174.67932 13479.44598 12936.72595 15176.22065 16327.84714 12998.6518 20491.80712 21852.53235 0.709295186 0.673032752 0.694412852 0.616836793 0.592001226 0.694483386 0.747183296 0.594835033 0.937731462 1 14.41551285 -8.352642241 4.896611818 0.991618623 0.666398669 0.859680323 0.049199735 0.077481756 2.94073651 0.048136573 0.012643727 4.44E-09 8.352642241 -0.325219955 DAEDALHNLDR ddPTM_A459_MK2206_30min_R1 3 DAEDALHNLDR 11 0 O75494-2;O75494;Q5JRI1;O75494-5;O75494-4;O75494-6;O75494-3 O75494-2;O75494-6 SRSF10 Serine/arginine-rich splicing factor 10 0 ;; 164.48 0.00078525 19646700 16703.1 17285.3 15980.6 11751.5 13292.5 14193.7 17949.2 12970.8 19345.5 23144.8 FALSE TRUE 15282.41363 16160.02383 14895.8814 12656.60257 12763.03158 14997.33503 16751.84162 12857.39766 21356.53395 26012.15256 0.587510534 0.621249002 0.572650855 0.486564983 0.490656494 0.576551095 0.644000591 0.494284263 0.821021402 1 14.66689817 -8.466004923 3.441231326 0.998056926 0.560877167 0.883035732 0.052984546 0.068288049 1.696230348 0.054292678 0.014374982 3.42E-09 8.466004923 -0.437179759 DAEDALHNLDR ddPTM_A459_MK2206_30min_R2 4 DAEDALHNLDR 11 0 O75494-2;O75494;Q5JRI1;O75494-5;O75494-4;O75494-6;O75494-3 O75494-2;O75494-6 SRSF10 Serine/arginine-rich splicing factor 10 0 ;;; 181.66 5.74E-05 30140800 280591 253330 243159 238689 217647 212393 284925 234732 184006 267486 FALSE TRUE 302073.2627 240750.0006 251265.7997 219187.3452 209101.0852 220475.7644 247514.0052 265412.2784 200010.5093 258757.9537 1.167397015 0.930406185 0.971045705 0.847074813 0.808095296 0.852054058 0.956546462 1.025716406 0.772963715 1 17.98124368 -4.013508052 1.371279468 0.897542541 2.521952409 0.489868556 0.079912619 7.805643739 2.765850308 0.023178539 29.28180607 9.69E-05 4.013508052 1.624409869 DAEDALHNLDRK ddPTM_A459_MK2206_30min_R2 1 DAEDALHNLDRK 12 1 O75494-2;O75494;Q5JRI1;O75494-5;O75494-4;O75494-6;O75494-3 O75494-2;O75494-6 SRSF10 Serine/arginine-rich splicing factor 10 0 74.944 0.034143 4182200 60512 81141 73929 74660 82212 70082 79391 57517 72401 80681 FALSE TRUE 65144.84525 77111.65593 76393.75596 68560.03917 78983.9438 72749.01962 68966.86633 65034.66939 78698.30811 78048.38558 0.834672553 0.987998091 0.978799951 0.878429947 1.0119869 0.93210153 0.883642446 0.833260918 1.008327175 1 16.25208117 -4.775068272 0.004601923 1.844412253 1.21E-07 0.058722934 0.066171691 176323.6391 126.6552264 24539.45993 26242.76109 1.68E-05 4.775068272 -1.844412133 DAEDAMDAMDGAVLDGR ddPTM_A459_MK2206_30min_R1 1 DAEDAMDAMDGAVLDGR 17 0 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 0 183.06 9.28E-07 6448600 1566.5 1688.6 1527.6 1524.7 1615.5 1716.5 1917.5 1683.9 1556.7 1459 FALSE TRUE 1433.260949 1578.671833 1423.910768 1642.132658 1551.151214 1813.686747 1789.587074 1669.17784 1718.524536 1639.751935 0.874071814 0.962750401 0.868369622 1.00145188 0.945966997 1.106073857 1.091376711 1.017945339 1.04803934 1 10.67926186 -6.305497774 1.562728869 1.053116152 0.911768378 0.607504161 0.04813015 0.254447235 1.238702542 0.017463068 0.022906113 4.95E-07 6.305497774 -0.141347774 DAEDAMDAMDGAVLDGR ddPTM_A459_MK2206_30min_R2 1 DAEDAMDAMDGAVLDGR 17 0 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 0 132.51 0.0097156 4215200 20502 30435 25455 31088 30485 27697 25263 27913 29094 26241 FALSE TRUE 22071.64888 28923.64216 26303.657 28548.01095 29288.00573 28751.02874 21945.93775 31561.32494 31624.54353 25384.75832 0.869484303 1.13940979 1.036198835 1.124612281 1.153763426 1.132609906 0.864532074 1.243317921 1.245808336 1 14.6316749 -4.756409685 24.99057726 1.105493511 0.869483938 0.297629654 0.108285735 205.263782 1019759.034 0.027096696 0.219570451 1.75E-05 4.756409685 -0.236009573 DAEDDGEEEDD ddPTM_A459_MK2206_30min_R1 1 DAEDDGEEEDD 11 0 H0YCE2;Q5TB25;Q5TB19;Q9BTT0-3;Q9BTT0-2;Q9BTT0 H0YCE2 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E 0 194.2 0.00028307 6788000 4766.5 5048.7 4881.1 4439 4018.8 3736.8 5274.7 4697.8 2297 3912.9 FALSE TRUE 4361.084145 4720.028712 4549.784532 4780.892549 3858.722686 3948.374387 4922.834387 4656.72763 2535.78137 4397.659593 0.991682974 1.073304701 1.03459225 1.087144752 0.877449153 0.897835383 1.119421429 1.058910434 0.576620658 1 12.10252022 -8.228223802 24.9956119 0.788310084 1.017025715 0.367678817 0.120244368 559.7620656 421237.2246 0.078234781 0.029565702 5.91E-09 8.228223802 0.228715631 DAEDDGEEEDD ddPTM_A459_MK2206_30min_R2 2 DAEDDGEEEDD 11 0 H0YCE2;Q5TB25;Q5TB19;Q9BTT0-3;Q9BTT0-2;Q9BTT0 H0YCE2 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E 0 ; 190.26 0.00027057 14077100 131789 158775 133317 150672 146619 120279 155370 122508 118165 138868 FALSE TRUE 141878.8672 150890.4644 137761.7222 138361.6156 140862.0014 124856.3016 134969.7324 138520.2162 128442.7781 134336.7485 1.056143376 1.123225521 1.025495434 1.029961028 1.048573848 0.929427748 1.004711919 1.031141648 0.956125405 1 17.03549449 -5.799844375 1.046546732 0.990717518 1.090727792 0.489293639 0.036402043 0.506941656 1.072962053 0.014022256 0.038653694 1.59E-06 5.799844375 0.100010274 DAEFYEHR ddPTM_A459_MK2206_30min_R1 2 DAEFYEHR 8 0 O95340;O95340-2 O95340 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase 0 ; 154.12 0.0010722 6279200 4560.1 5055.9 5334.7 4156.1 5887.8 5691.5 6382.8 5951.2 5328.3 6166.9 FALSE TRUE 4172.239549 4726.759991 4972.595427 4476.203542 5653.276458 6013.747812 5957.015058 5899.169286 5882.195853 6930.90213 0.601976405 0.68198337 0.717452842 0.645832744 0.815662428 0.867671726 0.859486247 0.85114018 0.84869123 1 12.75882743 -3.492406954 0.15753685 1.038268073 1.30E-22 0.872292243 0.041653801 12.67526929 0.228580852 0.163580026 2.754144212 0.000321805 3.492406954 -1.038268073 DAEFYEHR ddPTM_A459_MK2206_30min_R2 2 DAEFYEHR 8 0 O95340;O95340-2 O95340 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase 0 ; 121.09 0.0099258 5525600 65635 84913 78127 81104 77192 85456 87291 71573 77440 85218 FALSE TRUE 70660.06606 80696.3439 80731.71519 74477.54376 74161.05422 88708.08796 75829.58684 80927.83685 84175.59122 82437.34364 0.85713662 0.978880933 0.979310002 0.903444246 0.899605093 1.076066793 0.919845103 0.981689041 1.021085682 1 16.3310104 -6.721010109 24.99999873 0.993600028 0.92870921 0.362660424 0.049864354 201.1582211 124388.3325 0.016456648 0.016456451 1.90E-07 6.721010109 -0.064890818 DAEGILEDLQSYR ddPTM_A459_MK2206_30min_R2 1 DAEGILEDLQSYR 13 0 E5RK61;E5RFS4;E5RHU5;E5RGI7;E5RJE1;E5RIR8;E5RJL8;E5RI16;Q9NUQ9 E5RK61 FAM49B Protein FAM49B 0 120.03 0.043122 1561000 3924 7403.2 1847.9 6491.9 7420.6 7823.8 6996.7 5870.3 6729 5785.2 FALSE TRUE 4224.424457 7035.567853 1909.508064 5961.491003 7129.229958 8121.540191 6078.024885 6637.568366 7314.276257 5596.429398 0.754842804 1.257152973 0.341201135 1.065231164 1.27388902 1.45120033 1.086054063 1.186036291 1.306954084 1 12.45029095 -5.992002685 24.9999418 1.226127866 0.81026463 0.401768342 0.235506851 188.6890016 589842.6493 0.064344761 0.095254102 1.02E-06 5.992002685 -0.415863236 DAELQDQEFGKRDS(ph)LGTYSSR ddPTM_A459_MK2206_30min_R2 2 DAELQDQEFGKRDSLGTYSSR 21 2 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DAELQDQEFGKRDS(0.929)LGT(0.055)Y(0.013)S(0.002)SR;DAELQDQEFGKRDS(0.491)LGT(0.277)Y(0.054)S(0.137)S(0.041)R 63.936 0.012831 85885000 48882 115632 83218 105100 135816 105043 132598 74389 119774 99249 TRUE FALSE 52624.4435 109889.883 85992.44659 96512.9938 130483.1814 109040.485 115187.7233 84111.89772 130191.726 96010.51326 0.548111261 1.144560937 0.895656566 1.005233599 1.359050973 1.13571401 1.199740731 0.87606966 1.356015311 1 16.55090477 -4.759024188 24.99324969 1.105862241 0.548110529 0.524042597 0.160064679 52.03579626 538368.499 0.039164542 0.256269136 1.74E-05 4.759024188 -0.557751711 DAEPPS(ph)PTPAGPPR ddPTM_A459_MK2206_30min_R1 1 DAEPPSPTPAGPPR 14 0 O43306-2;O43306 O43306-2 ADCY6 Adenylate cyclase type 6 1 DAEPPS(0.99)PT(0.01)PAGPPR 150.9 0.00041203 10110000 2652.1 3018.9 2269.5 2151.4 2979.6 2479 3350 2945.7 2951.2 2945.6 TRUE FALSE 2426.524968 2822.369061 2115.452663 2317.101201 2860.916223 2619.358838 3126.527612 2919.946055 3257.987801 3310.523166 0.732973263 0.852544725 0.639008567 0.699919948 0.864188552 0.791222023 0.944421004 0.88201952 0.984130797 1 11.69284351 -7.21534907 0.844350826 0.981320017 0.736523269 0.689613852 0.064402649 0.378587611 0.532327062 0.051415439 0.031641844 6.09E-08 7.21534907 -0.244796748 DAEPPS(ph)PTPAGPPR ddPTM_A459_MK2206_30min_R2 2 DAEPPSPTPAGPPR 14 0 O43306-2;O43306 O43306-2 ADCY6 Adenylate cyclase type 6 1 DAEPPS(0.974)PT(0.026)PAGPPR;DAEPPS(0.985)PT(0.015)PAGPPR 172.85 0.00011496 18588800 86461 56128 66457 66860 63487 69107 92334 43805 92973 77261 TRUE FALSE 93080.52064 53340.76514 68672.64321 61397.32413 60994.18138 71736.91531 80210.43489 49530.46391 101059.6235 74739.9799 1.245391299 0.713684499 0.918820734 0.821479002 0.816085065 0.959819837 1.073193156 0.662703736 1.35214946 1 16.18959256 -8.268935917 24.99949665 1.176074702 0.897887142 0.274032118 0.178757247 776.8105595 2590477.165 0.149104333 0.041473472 5.38E-09 8.268935917 -0.278187561 DAEPQPGS(ph)PAAESLEEPDAAAGLSSTK ddPTM_A459_MK2206_30min_R1 2 DAEPQPGSPAAESLEEPDAAAGLSSTK 27 0 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 DAEPQPGS(0.999)PAAES(0.001)LEEPDAAAGLSSTK;DAEPQPGS(0.978)PAAES(0.022)LEEPDAAAGLSSTK 123.86 5.06E-12 5466700 2271.02 2415.83 2018.59 1438.45 1770.62 2270.95 2692.22 1750.23 2699.48 2777.35 TRUE FALSE 2077.857823 2258.559028 1881.573735 1549.239668 1700.092456 2399.529226 2512.626916 1734.927924 2980.100606 3121.429086 0.665675166 0.723565702 0.602792402 0.496323839 0.544651956 0.768727772 0.804960435 0.555812058 0.954723149 1 11.60799098 -8.410390633 0.851653172 1.013209616 0.627941812 0.566675705 0.107530528 0.478497731 0.772767821 0.107623604 0.03914097 3.89E-09 8.410390633 -0.385267804 DAEPQPGS(ph)PAAESLEEPDAAAGLSSTK ddPTM_A459_MK2206_30min_R2 1 DAEPQPGSPAAESLEEPDAAAGLSSTK 27 0 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 DAEPQPGS(0.999)PAAES(0.001)LEEPDAAAGLSSTK 136.2 2.84E-12 4375400 52288 46359 47860 49215 42570 37849 53591 41207 34257 54333 TRUE FALSE 56291.20948 44056.87947 49455.62851 45193.97707 40898.4879 39289.37022 46554.43733 46592.89638 37236.61194 52560.11866 1.070987108 0.838218798 0.940934491 0.859853026 0.77812777 0.747512966 0.885736914 0.88646863 0.708457532 1 15.68168091 -1.709318425 1.048922837 0.835699643 199.9999997 0.365375492 0.084860093 1582.812703 2.589440932 0.025477483 757363.2339 0.019529071 1.709318425 199.1643001 DAGDPS(ph)PPNK ddPTM_A459_MK2206_30min_R1 4 DAGDPSPPNK 10 0 Q9BTA9-5;Q9BTA9;A0A0A0MRT2;Q9BTA9-2;A0A494C0S5;E9PMZ7;C9JMU2;A0A494C0B7;A0A494C0C1;C9JVK6;C9JD58;J3QTA0;Q9BTA9-3 Q9BTA9-5 WAC WW domain-containing adapter protein with coiled-coil 1 DAGDPS(1)PPNK;DAGDPS(1)PPNK;DAGDPS(1)PPNK;DAGDPS(1)PPNK 124.92 0.0037132 136287000 37679.2 40900.7 40959.8 35955.1 31406.4 29349.3 32803.4 33332.5 36184.7 35658.5 TRUE FALSE 34474.38618 38238.057 38179.5629 38724.36803 30155.41658 31011.032 30615.14504 33041.07747 39946.22905 40076.14419 0.860222132 0.954135129 0.952675555 0.966269805 0.752453041 0.773802785 0.763924416 0.824457496 0.996758293 1 15.29045609 -4.404558438 14.56258849 0.876510566 0.000113062 0 0.095350342 657710.0863 763824.7341 0.025572493 18790411.11 3.94E-05 4.404558438 -0.876397504 DAGDPS(ph)PPNK ddPTM_A459_MK2206_30min_R2 3 DAGDPSPPNK 10 0 Q9BTA9-5;Q9BTA9;A0A0A0MRT2;Q9BTA9-2;A0A494C0S5;E9PMZ7;C9JMU2;A0A494C0B7;A0A494C0C1;C9JVK6;C9JD58;J3QTA0;Q9BTA9-3 Q9BTA9-5 WAC WW domain-containing adapter protein with coiled-coil 1 DAGDPS(1)PPNK;DAGDPS(1)PPNK;DAGDPS(1)PPNK 115.92 0.0048651 22854000 508025 553451 536164 502650 510335 325474 590105 450302 394886 571461 TRUE FALSE 546919.7846 525967.4281 554039.4402 461581.8871 490296.6837 337860.1411 512623.5047 509158.0175 429232.4705 552814.2744 0.989337305 0.951436047 1.002216234 0.834967381 0.886910318 0.611163924 0.92729788 0.921029071 0.776449687 1 19.07643534 -5.765730693 24.98749613 0.842493984 0.978040493 0.25956392 0.099745878 138.6278323 807209.3724 0.027709826 0.042774103 1.72E-06 5.765730693 0.135546508 DAGGPRPES(ph)PVPAGR ddPTM_A459_MK2206_30min_R1 1 DAGGPRPESPVPAGR 15 1 E9PS47;E9PLE4;Q9BVG9 E9PS47 PTDSS2 Phosphatidylserine synthase 2 1 DAGGPRPES(1)PVPAGR 117.13 0.010333 14830000 2286.1 2485.8 1716.7 1960.2 2786.6 2193.1 2584.2 2049.2 2673.6 1890.2 TRUE FALSE 2091.65519 2323.973968 1600.175187 2111.174944 2675.603821 2317.271427 2411.812733 2031.28406 2951.530288 2124.372246 0.984599189 1.093957979 0.753246137 0.993787669 1.259479748 1.090802909 1.135306083 0.95618085 1.389365867 1 11.05282087 -6.018627785 24.32401543 1.133134735 0.944700164 0.296403153 0.13891586 665.5862155 869118.3512 0.039298611 0.051715472 9.58E-07 6.018627785 -0.188434571 DAGT(ph)IAGLNVLR ddPTM_A459_MK2206_30min_R1 3 DAGTIAGLNVLR 12 0 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PI65 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 DAGT(1)IAGLNVLR;DAGT(1)IAGLNVLR;DAGT(1)IAGLNVLR 130.19 0.0051522 12400900 3659.8 3493.78 3724.6 3339.66 3454.4 3482.2 3461.53 3366.7 2793.05 2520.15 TRUE FALSE 3348.514792 3266.334287 3471.784529 3596.881192 3316.803933 3679.359155 3230.61765 3337.265297 3083.397543 2832.365208 1.182232709 1.15321791 1.225754546 1.2699214 1.171036815 1.29904122 1.14060773 1.178260942 1.088629931 1 11.46779158 -8.415857865 1.178562293 1.000374441 1.212018333 0.68283267 0.045967905 0.267388343 0.800676453 0.043400993 0.013818991 3.84E-09 8.415857865 0.211643893 DAGT(ph)IAGLNVLR ddPTM_A459_MK2206_30min_R2 1 DAGTIAGLNVLR 12 0 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PI65 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 DAGT(1)IAGLNVLR 119.88 0.0097481 2796200 9420.5 11922 11223 13161 9666 13330 14917 11212 13288 9772.7 TRUE FALSE 10141.74072 11329.97082 11597.16922 12085.7042 9286.464272 13837.28249 12958.37998 12677.4469 14443.76622 9453.817599 1.072766702 1.198454561 1.226718106 1.278394053 0.982297805 1.463671405 1.370703406 1.340987042 1.527823662 1 13.20668131 -6.777014137 24.99993536 1.363827927 1.165525535 0.27156522 0.1515084 302.1640791 485017.8563 0.050357368 0.044562129 1.67E-07 6.777014137 -0.198302392 DAHDVS(ph)PTST(ph)DTEAQLTVER ddPTM_A459_MK2206_30min_R2 1 DAHDVSPTSTDTEAQLTVER 20 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 2 DAHDVS(0.995)PT(0.076)S(0.293)T(0.631)DT(0.005)EAQLTVER 99.378 0.0021342 0 15791 20392 16092 17876 17283 19469 20792 15734 15427 13319 TRUE FALSE 16999.9711 19379.36293 16628.49925 16415.47362 16604.38258 20209.90644 18061.98542 17790.48782 16768.81257 12884.40212 1.319422581 1.504094854 1.290591453 1.274057846 1.28871968 1.568556014 1.401848938 1.380777133 1.301481622 1 13.65333797 -8.769283192 2.267553088 1.000103175 1.380314245 0.607926702 0.09097254 0.793095598 6.198363558 0.091480826 0.02493637 1.70E-09 8.769283192 0.38021107 DAHDVS(ph)PTSTDTEAQLTVER ddPTM_A459_MK2206_30min_R1 8 DAHDVSPTSTDTEAQLTVER 20 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 DAHDVS(0.933)PT(0.047)S(0.015)T(0.005)DTEAQLTVER;DAHDVS(1)PTSTDTEAQLTVER;DAHDVS(0.999)PT(0.001)STDTEAQLTVER;DAHDVS(0.986)PT(0.013)S(0.001)TDTEAQLTVER;DAHDVS(0.97)PT(0.026)S(0.003)T(0.001)DTEAQLTVER;DAHDVS(0.906)PT(0.084)S(0.008)T(0.002)DTEAQLTVER;DAHDVS(0.757)PT(0.207)S(0.027)T(0.008)DT(0.001)EAQLTVER;DAHDVS(0.975)PT(0.024)STDTEAQLTVER 233.49 2.49E-54 1039479970 21655.71 21486.77 20874.75 18503.12 22729.12 20350.84 22283 21617.77 19849.9 18259.57 TRUE FALSE 19813.77815 20087.97737 19457.83013 19928.23351 21823.77102 21503.08697 20796.54173 21428.76812 21913.36814 20521.70338 0.965503583 0.978865009 0.948158628 0.971080867 1.063448322 1.047821741 1.01339257 1.044200265 1.06781429 1 14.32486286 -6.218613274 8.420088272 1.040751166 0.965379338 0.754182137 0.020561805 0.170679309 31.5199876 0.006006713 0.00772853 6.04E-07 6.218613274 -0.075371828 DAHDVS(ph)PTSTDTEAQLTVER ddPTM_A459_MK2206_30min_R2 7 DAHDVSPTSTDTEAQLTVER 20 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 DAHDVS(1)PTSTDTEAQLTVER;DAHDVS(0.991)PT(0.007)S(0.002)TDTEAQLTVER;DAHDVS(1)PTSTDTEAQLTVER;DAHDVS(1)PTSTDTEAQLTVER;DAHDVS(0.957)PT(0.043)STDTEAQLTVER;DAHDVS(0.997)PT(0.003)STDTEAQLTVER;DAHDVS(0.982)PT(0.018)STDTEAQLTVER 233.46 2.76E-24 1503748700 897090 1105145 1016905 1249469 1140942 1081938 1232298 913880 1077007 1140027 TRUE FALSE 965771.9001 1050265.106 1050808.105 1147383.386 1096142.884 1123111.909 1070495.792 1033327.254 1170683.122 1102828.012 0.875723041 0.952338075 0.952830444 1.040401017 0.993938195 1.01839262 0.970682446 0.936979513 1.061528279 1 20.07277639 -4.736617874 1.280761812 0.998130342 0.81569887 0.546558934 0.034780109 1.212204794 1.612340077 0.010309046 0.300659571 1.83E-05 4.736617874 -0.182431473 DAINQGMDEELER ddPTM_A459_MK2206_30min_R1 1 DAINQGMDEELER 13 0 F8WF02;C9J634;P11177-3;P11177-2;P11177 F8WF02 PDHB "Pyruvate dehydrogenase E1 component subunit beta, mitochondrial" 0 231.05 5.52E-11 2980400 1510.3 1119.1 993.69 967.24 1192.3 1128.2 1324.9 1072.6 979.28 1455.3 FALSE TRUE 1381.841054 1046.246387 926.2410914 1041.736992 1144.808166 1192.077709 1236.518338 1063.222371 1081.07966 1635.593551 0.844856018 0.639673827 0.566302729 0.636916789 0.699934385 0.728834929 0.756005878 0.650052925 0.66097085 1 10.67559856 -10.72624799 4.135466872 1.000159871 0.683187249 0.623716728 0.072863802 20790998.45 17975393.98 26537.47286 0.018362381 1.88E-11 10.72624799 -0.316972623 DALDGPAAEAEPEHSFDGLR ddPTM_A459_MK2206_30min_R2 2 DALDGPAAEAEPEHSFDGLR 20 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 171.25 2.21E-09 4897400 36482 39892 36047 45315 39603 41564 44333 32778 40287 43327 FALSE TRUE 39275.08997 37911.02129 37248.78899 41612.61954 38047.98723 43145.74715 38512.02385 37062.19714 43791.09044 41913.24354 0.937056802 0.904511751 0.888711678 0.99282747 0.907779595 1.029406066 0.918850955 0.884259819 1.044803187 1 15.35511855 -1.522878805 0.061416285 1.084638613 0.656489389 0.186595709 0.051564085 589.362669 2.710444757 3.754082921 22.45616118 0.029999996 1.522878805 -0.428149224 DALDGPAAEAEPEHSFDGLRR ddPTM_A459_MK2206_30min_R1 2 DALDGPAAEAEPEHSFDGLRR 21 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 137.81 1.92E-05 11938500 3145.8 3548.5 3660.7 3601.5 4122.4 3196.1 3100.4 3784 2622.1 1755.52 FALSE TRUE 2878.233191 3317.492005 3412.221883 3878.888154 3958.196079 3377.06042 2893.577973 3750.916887 2894.676678 1973.007071 1.458805309 1.681439491 1.729452435 1.965977827 2.006174299 1.711631179 1.466582667 1.901116799 1.467139536 1 10.94618041 -8.575763853 4.220771434 1.000264059 1.742810557 0.628252134 0.17520575 0.177250616 9.664549203 0.179195339 0.046848817 2.66E-09 8.575763853 0.742546498 DALDGPAAEAEPEHSFDGLRR ddPTM_A459_MK2206_30min_R2 2 DALDGPAAEAEPEHSFDGLRR 21 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 117.2 5.13E-05 9839200 34830 71655 56068 66914 83708 74729 61297 48479 65690 55970 FALSE TRUE 37496.61158 68096.7169 57937.27914 61446.91215 80421.20332 77572.86446 53248.63027 54815.37175 71403.59746 54143.70348 0.692538729 1.257703343 1.070064946 1.134885651 1.485328822 1.432721803 0.983468563 1.012405289 1.318779338 1 15.72450595 -4.756978926 24.91501064 1.193904651 0.692537947 0.428061059 0.171834103 133.3075193 744525.7997 0.045130945 0.348529512 1.75E-05 4.756978926 -0.501366704 DALGDSLQVPVS(ph)PSSTTSSR ddPTM_A459_MK2206_30min_R1 4 DALGDSLQVPVSPSSTTSSR 20 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 DALGDSLQVPVS(0.942)PS(0.027)S(0.027)T(0.003)TSSR;DALGDSLQVPVS(0.933)PS(0.031)S(0.031)T(0.003)T(0.003)SSR;DALGDSLQVPVS(1)PSSTTSSR;DALGDSLQVPVS(0.562)PS(0.156)S(0.091)T(0.095)T(0.035)S(0.035)S(0.026)R 329.78 7.40E-155 440824600 16791 14949.4 15188.3 13709.7 15276.9 12882.3 13986.7 13170.8 12003.3 11336.5 TRUE FALSE 15362.83728 13976.19134 14157.36051 14765.62347 14668.38872 13611.68469 13053.67276 13055.64908 13251.08599 12740.95121 1.20578417 1.096950386 1.111169824 1.158910605 1.151278934 1.068341325 1.0245446 1.024699716 1.040038987 1 13.63718537 -6.940689159 3.086244866 1.025239079 1.141178905 0.798293143 0.029101499 0.11885498 2.304080795 0.011373395 0.009584701 1.15E-07 6.940689159 0.115939826 DALGDSLQVPVS(ph)PSSTTSSR ddPTM_A459_MK2206_30min_R2 5 DALGDSLQVPVSPSSTTSSR 20 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 DALGDSLQVPVS(0.795)PS(0.195)S(0.006)T(0.002)T(0.002)SSR;DALGDSLQVPVS(0.729)PS(0.235)S(0.007)T(0.007)T(0.007)S(0.007)S(0.007)R;DALGDSLQVPVS(0.965)PS(0.026)S(0.008)T(0.001)TSSR;DALGDSLQVPVS(0.997)PS(0.002)S(0.001)TTSSR;DALGDSLQVPVS(0.992)PS(0.005)S(0.002)TTSSR 351.02 1.54E-194 412358300 177821.9 201929 182448.6 214789.7 208327 194575 204496.6 157082.9 182211.1 181667.4 TRUE FALSE 191436.0814 191901.4995 188531.3453 197240.6944 200147.0352 201979.688 177645.9508 177614.1744 198059.4921 175739.6076 1.089316654 1.091964994 1.072788018 1.122346278 1.138884045 1.149312273 1.010847544 1.010666729 1.12700543 1 17.42307985 -7.267361369 24.99762615 1.038018819 1.109991824 0.455957793 0.039396077 493.9146616 2084879.008 0.016643034 0.011542092 5.40E-08 7.267361369 0.071973005 DALGDSLQVPVSPS(ph)STTSSR ddPTM_A459_MK2206_30min_R1 1 DALGDSLQVPVSPSSTTSSR 20 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 DALGDSLQVPVS(0.245)PS(0.391)S(0.205)T(0.067)T(0.067)S(0.012)S(0.012)R 130.47 0.00016696 6155300 1556.7 1547.3 1550.2 1593.6 1814.3 1575.4 1903.5 1923.2 1337.4 1478.2 TRUE FALSE 1424.29449 1446.570489 1444.976743 1716.339348 1742.032589 1664.597787 1776.520988 1906.385665 1476.427516 1661.330576 0.857321542 0.87073007 0.869770751 1.033111274 1.048576734 1.001966623 1.069336238 1.147505315 0.888701826 1 10.69812346 -5.759800329 7.33651711 1.035027584 0.86579091 0.588254877 0.061515065 0.081879112 26.72941214 0.01655502 0.026748496 1.74E-06 5.759800329 -0.169236673 DALGDSLQVPVSPS(ph)STTSSR ddPTM_A459_MK2206_30min_R2 1 DALGDSLQVPVSPSSTTSSR 20 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 DALGDSLQVPVS(0.188)PS(0.715)S(0.072)T(0.019)T(0.005)SSR 289.43 1.15E-85 47108000 70197 84650 76777 84420 90683 81663 73833 60295 72433 71489 TRUE FALSE 75571.33629 80446.40409 79336.70686 77522.61595 87122.32977 84770.74269 64138.63841 68175.76352 78733.09141 69156.31978 1.092761103 1.163254556 1.147208341 1.120976596 1.259788405 1.225784468 0.927444355 0.985821162 1.138480065 1 16.07757348 -7.255271653 24.99682474 1.011754825 1.169115833 0.567874031 0.066387392 382.9488025 1552034.556 0.026884929 0.020300718 5.56E-08 7.255271653 0.157361009 DALNIET(ph)AIK ddPTM_A459_MK2206_30min_R2 1 DALNIETAIK 10 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 DALNIET(1)AIK 103.83 0.020599 0 18822 13334 18391 14831 16650 12284 19877 15464 17722 20641 TRUE FALSE 20263.02679 12671.85295 19004.14676 13619.25986 15996.23734 12751.47623 17267.12602 17485.1979 19263.42753 19967.48586 1.014801109 0.634624361 0.951754612 0.682071842 0.801114244 0.638612007 0.864762151 0.8756835 0.96473976 1 14.28536507 -7.9997072 1.703322358 0.990056714 0.78456435 0.284219681 0.118203764 0.457896462 2.391446808 0.096295765 0.032014137 1.00E-08 7.9997072 -0.205492364 DALNIETAIK ddPTM_A459_MK2206_30min_R1 2 DALNIETAIK 10 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 172.27 0.0020671 23301000 5963 5707.9 5307.4 5736.1 5337.1 5696.1 5994.3 5873.5 4942.9 4931.5 FALSE TRUE 5455.815537 5336.314673 4947.148475 6177.895416 5124.512006 6018.60826 5594.431184 5822.148609 5456.732143 5542.451451 0.984368665 0.962807653 0.892592117 1.114650344 0.924593034 1.085910867 1.009378473 1.050464521 0.984534044 1 12.43630851 -5.744167841 24.99990805 1.024122556 0.948211326 0.299408311 0.054399972 296.7313551 429504.2288 0.013742872 0.023726226 1.80E-06 5.744167841 -0.07591123 DALQDS(ph)LAR ddPTM_A459_MK2206_30min_R1 3 DALQDSLAR 9 0 Q96A99-2;Q96A99 Q96A99-2 PTX4 Pentraxin-4 1 DALQDS(1)LAR;DALQDS(1)LAR;DALQDS(1)LAR 112.41 0.0097094 22612100 7656.6 7472.5 7319.5 6992.8 8335.9 7355.2 7810.7 7037.6 5838.5 6116.9 TRUE FALSE 7005.365964 6986.038892 6822.672733 7531.386668 8003.863451 7771.645068 7289.662454 6976.071005 6445.432968 6874.707752 1.019005639 1.016194309 0.992430948 1.095520994 1.164247811 1.130469156 1.060359613 1.014744373 0.937557377 1 12.74708267 -7.91972737 3.144120119 0.969580138 1.070705576 0.375712664 0.051828825 0.304234812 5.897720107 0.040280889 0.016337168 1.20E-08 7.91972737 0.101125438 DANGNSFATR ddPTM_A459_MK2206_30min_R2 1 DANGNSFATR 10 0 P62701;C9JEH7;P22090;Q8TD47 P62701 RPS4X;RPS4Y1;RPS4Y2 "40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2" 0 126.39 0.047994 9205500 10266 8808.9 14437 12437 15728 11514 13748 8238.5 7937.3 19221 FALSE TRUE 11051.97285 8371.462835 14918.32237 11420.85732 15110.43969 11952.17334 11942.87109 9315.300237 8627.672007 18593.82034 0.594389569 0.450228231 0.802326907 0.614228658 0.812659228 0.642803529 0.642303242 0.500989042 0.464007495 1 14.1825356 -5.244726886 24.93380726 0.666104936 0.522308909 0.144440155 0.15291142 1681.088928 2508051.461 0.038163759 0.100362872 5.69E-06 5.244726886 -0.143796027 DANIKSPT(ph)AQAAPR ddPTM_A459_MK2206_30min_R1 1 DANIKSPTAQAAPR 14 1 Q96PU8-5;Q96PU8-3 Q96PU8-5 1 DANIKS(0.004)PT(0.996)AQAAPR 135.57 0.0062412 2910200 955.69 869.33 1048.5 1025.2 764.56 673.3 783.97 885.02 846.68 710.77 TRUE FALSE 874.403547 812.736459 977.3307413 1104.161082 734.1059562 711.4216641 731.6727917 877.2823634 934.6954159 798.8255536 1.094611387 1.017414197 1.223459536 1.382230547 0.918981563 0.89058451 0.915935636 1.098215198 1.170087025 1 9.641736674 -6.296816609 24.99856573 0.994307354 1.171001657 0.355257007 0.118783999 769.7168332 543902.0945 0.040851599 0.046323219 5.05E-07 6.296816609 0.176694303 DANVS(ph)GTLVSSSTLEK ddPTM_A459_MK2206_30min_R1 2 DANVSGTLVSSSTLEK 16 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 DANVS(0.998)GT(0.002)LVSSSTLEK;DANVS(0.732)GT(0.268)LVSSSTLEK 200.99 6.46E-07 10318300 2769 2724.8 2939 2115.3 2093.28 2164.66 2304.6 1872.66 1820.93 1696.16 TRUE FALSE 2533.482009 2547.415025 2739.508869 2278.220773 2009.900225 2287.221179 2150.864339 1856.287531 2010.22219 1906.293106 1.32900969 1.336318647 1.437086909 1.195105184 1.054350046 1.199826601 1.128296762 0.97376816 1.054518942 1 10.89655425 -5.971221661 3.919990315 1.078594056 1.363147941 0.802648032 0.066138735 0.100697693 3.416358943 0.020740844 0.030678183 1.07E-06 5.971221661 0.284553885 DANVS(ph)GTLVSSSTLEK ddPTM_A459_MK2206_30min_R2 2 DANVSGTLVSSSTLEK 16 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 DANVS(0.715)GT(0.221)LVS(0.056)S(0.004)S(0.004)T(0.001)LEK;DANVS(0.976)GT(0.024)LVSSSTLEK 217.35 1.27E-10 10999200 42181 67766 49441 59314 57703 48142 62483 49801 47785 46247 TRUE FALSE 45410.40979 64400.83898 51089.33826 54467.85646 55437.29029 49974.07754 54278.90704 56310.16169 51941.25292 44737.96418 1.01503076 1.43951206 1.141968331 1.217486255 1.239155409 1.117039599 1.213262786 1.258666163 1.161010651 1 15.44921199 -8.563641255 12.70796918 0.999999996 1.2098289 0.260121617 0.103552466 16.74499222 5221.557888 0.092201688 0.023807888 2.73E-09 8.563641255 0.209828904 DANVSGTLVSSST(ph)LEK ddPTM_A459_MK2206_30min_R1 1 DANVSGTLVSSSTLEK 16 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 DANVSGTLVS(0.003)S(0.029)S(0.211)T(0.757)LEK 145.04 0.00090558 3774000 1249.7 1081.4 1195 1108.1 978.73 970.36 1227.8 906.36 1005.2 818.55 TRUE FALSE 1143.406453 1011.000663 1113.886729 1193.446054 939.7451116 1025.300945 1145.895702 898.4357901 1109.694137 919.9581537 1.242889634 1.098963751 1.210801518 1.297282979 1.021508541 1.114508242 1.245595463 0.976605062 1.206244146 1 9.845424428 -14.52287875 0.073635441 0.463042966 1.332445618 0.23461555 0.095246359 429.7145523 2.256439731 38.16479273 4.256359275 3.00E-15 14.52287875 0.869402652 DANVSGTLVSSST(ph)LEK ddPTM_A459_MK2206_30min_R2 1 DANVSGTLVSSSTLEK 16 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 DANVSGTLVS(0.004)S(0.038)S(0.231)T(0.727)LEK 137.85 0.00094996 3764800 17999 16532 19208 18688 17632 15477 19489 16188 15743 18567 TRUE FALSE 19377.01728 15711.04492 19848.38513 17161.13062 16939.67909 16065.98808 16930.07089 18303.82718 17112.29768 17961.16031 1.078828814 0.874723272 1.105072545 0.955457795 0.943128328 0.894484978 0.942593385 1.019078215 0.952738987 1 14.13259293 -4.720665419 24.24799567 0.966301503 1.078830613 0.23328569 0.061743955 9696.144506 5765650.285 0.015148986 5.701535011 1.90E-05 4.720665419 0.11252911 DAPERDDPPASAAWS(ph)PVQADVSSAGPK ddPTM_A459_MK2206_30min_R1 1 DAPERDDPPASAAWSPVQADVSSAGPK 27 1 U3KQ39;Q96JE7-2;Q96JE7 U3KQ39 SEC16B Protein transport protein Sec16B 1 DAPERDDPPAS(0.008)AAWS(0.973)PVQADVS(0.013)S(0.006)AGPK 52.272 0.01067 4590100 1067.4 994.94 1019.3 775.09 948.58 840.07 1087.6 1016.6 775.96 900.54 TRUE FALSE 976.6120249 930.1692252 950.1127559 834.7875661 910.7960499 887.6340374 1015.048188 1007.711973 856.6238188 1012.105694 0.964930867 0.919043565 0.938748553 0.824802756 0.89990211 0.877017136 1.0029073 0.995658832 0.846377828 1 9.983144243 -7.25131396 24.962485 0.960874227 0.902537816 0.208050955 0.054584378 1131.115233 2788574.978 0.02125578 0.016274737 5.61E-08 7.25131396 -0.058336411 DAPIS(ph)PASIASSSSTPSSK ddPTM_A459_MK2206_30min_R1 4 DAPISPASIASSSSTPSSK 19 0 Q04727-4;Q04727;Q04727-3;H0Y5S0;H7C4E4 Q04727-4 TLE4 Transducin-like enhancer protein 4 1 DAPIS(0.996)PAS(0.004)IASSSSTPSSK;DAPIS(0.973)PAS(0.027)IASSSSTPSSK;DAPIS(1)PASIASSSSTPSSK;DAPIS(0.999)PAS(0.001)IASSSSTPSSK 251.74 8.27E-38 70475200 17803.2 19291 18555.4 16151.2 17334.1 17200 18156.2 17364.9 15998.4 15832.6 TRUE FALSE 16288.94435 18035.15239 17295.91115 17395.16822 16643.64609 18173.84914 16945.03303 17213.08051 17661.49093 17794.06202 0.915414611 1.013548923 0.972004657 0.977582758 0.935348324 1.021343475 0.952285825 0.967349697 0.992549701 1 14.11910827 DAPIS(ph)PASIASSSSTPSSK ddPTM_A459_MK2206_30min_R2 3 DAPISPASIASSSSTPSSK 19 0 Q04727-4;Q04727;Q04727-3;H0Y5S0;H7C4E4 Q04727-4 TLE4 Transducin-like enhancer protein 4 1 DAPIS(0.855)PAS(0.144)IASSSSTPSSK;DAPIS(0.984)PAS(0.016)IASSSSTPSSK;DAPIS(0.946)PAS(0.048)IAS(0.005)S(0.001)SSTPSSK 140.35 0.00011955 45183600 133687 126637 146558 146771 147560 145570 165738 135073 139299 169900 TRUE FALSE 143922.1795 120348.3907 151444.1706 134779.3398 141766.053 151109.7684 143976.4015 152727.5049 151414.9752 164356.1769 0.875672471 0.732241361 0.921438874 0.820044262 0.862553849 0.919404255 0.876002376 0.929247125 0.921261239 1 17.32646615 -7.360635604 0.192949679 1.03679134 0.755533917 0.526296838 0.047299696 2.907222067 0.425915153 0.19843901 0.30562091 4.36E-08 7.360635604 -0.281257423 DAPQDFHPDR ddPTM_A459_MK2206_30min_R1 2 DAPQDFHPDR 10 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 ; 144.7 0.0013377 104526000 12661.8 11715 11157.7 10948.2 12924.9 10216 11607.3 11993.9 10609.3 9174.9 FALSE TRUE 11584.84742 10952.35137 10400.34641 11791.43226 12410.07386 10794.42109 10832.9982 11889.0386 11712.1747 10311.55588 1.123482 1.062143434 1.008610779 1.143516303 1.203511285 1.04682758 1.050568733 1.152982027 1.135830018 1 13.33197441 -5.780413144 24.99143989 1.110566553 1.064485159 0.074753515 0.062174875 570.066675 750865.2051 0.01792591 0.026638337 1.66E-06 5.780413144 -0.046081394 DAPQDFHPDR ddPTM_A459_MK2206_30min_R2 3 DAPQDFHPDR 10 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 ;; 119.03 0.0077668 200660000 483768 544536 488532 564271 519776 546472 564085 421398 500565 502606 FALSE TRUE 520805.65 517495.1341 504819.4131 518168.2543 499366.9826 567268.3749 490019.9619 476476.1655 544103.2389 486206.0074 1.071162516 1.064353641 1.038282961 1.065738075 1.027068722 1.166724323 1.007844318 0.979988232 1.11907963 1 18.89120819 -14.52287872 0.232238625 0.686203275 1.064167537 0.102314849 0.051003117 401.5110787 4.006599451 59.32062715 0.085766112 3.00E-15 14.52287872 0.377964263 DAPSLEEVEGHVADGS(ph)ATEMGTTK ddPTM_A459_MK2206_30min_R1 2 DAPSLEEVEGHVADGSATEMGTTK 24 0 C9J470;E9PHA2;Q15003;Q15003-2 C9J470 NCAPH Condensin complex subunit 2 1 DAPSLEEVEGHVADGS(0.981)AT(0.019)EMGTTK;DAPSLEEVEGHVADGS(0.998)AT(0.002)EMGTTK 208.28 6.91E-32 26390000 5211.7 5057.4 5032.9 4749.6 5189.4 4769.8 5377 4652.1 5172.1 4485.3 TRUE FALSE 4768.417547 4728.162341 4691.28077 5115.415015 4982.695209 5039.861954 5018.310141 4611.42718 5709.758304 5040.972826 0.945932008 0.937946405 0.930630045 1.014767425 0.988439212 0.999779631 0.995504303 0.914789137 1.132669923 1 12.29948646 -5.29977472 0.389588468 1.017996883 0.891165096 0.238709669 0.051525348 6.244441673 1.013902619 0.045439319 0.356997671 5.01E-06 5.29977472 -0.126831787 DAPT(ph)SPASVASSSSTPSSK ddPTM_A459_MK2206_30min_R1 1 DAPTSPASVASSSSTPSSK 19 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 DAPT(0.739)S(0.259)PAS(0.002)VASSSSTPSSK 240.34 1.89E-29 41954000 7378.8 7369.6 7946.3 6496.3 7421.3 6244.9 7398.4 6741.3 5902 6191.6 TRUE FALSE 6751.194312 6889.837701 7406.927296 6996.646152 7125.693906 6598.480841 6904.866235 6682.361525 6515.534021 6958.662152 0.970185671 0.990109528 1.064418294 1.00545852 1.024003429 0.948239862 0.992269216 0.960294002 0.936319924 1 12.76459425 -6.756393883 24.99998552 0.966495763 1.012361819 0.363086017 0.028698745 139.986419 693620.9434 0.009821359 0.009533197 1.75E-07 6.756393883 0.045866055 DAPT(ph)SPASVASSSSTPSSK ddPTM_A459_MK2206_30min_R2 1 DAPTSPASVASSSSTPSSK 19 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 DAPT(0.862)S(0.123)PAS(0.014)VASSSSTPSSK 144.25 8.89E-05 0 15158 17196 15112 20031 19081 14471 17421 15849 16211 15972 TRUE FALSE 16318.50813 16342.07165 15615.82654 18394.40322 18331.78407 15021.70405 15133.60177 17920.51872 17621.00348 15450.83495 1.056157042 1.057682106 1.01067849 1.190511923 1.186459122 0.972226038 0.979468218 1.159841444 1.140456392 1 13.91539718 -10.58780631 4.218811443 0.999991495 1.082862049 0.093558833 0.07813581 59285357.87 1.934677611 5417.631337 0.02023658 2.58E-11 10.58780631 0.082870554 DAPTS(ph)PASVASSSSTPSSK ddPTM_A459_MK2206_30min_R1 2 DAPTSPASVASSSSTPSSK 19 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 DAPT(0.03)S(0.97)PASVASSSSTPSSK;DAPT(0.012)S(0.968)PAS(0.016)VAS(0.002)S(0.002)SSTPSSK 238.05 1.12E-29 75119000 10707.2 10678.6 10507.2 9259.6 11752.2 10393.5 11115.7 9806.3 8788.6 8072.5 TRUE FALSE 9796.496414 9983.421199 9794.000539 9972.775996 11284.08499 10981.97099 10374.19193 9720.564553 9702.20642 9072.582244 1.079791414 1.100394676 1.079516314 1.099221338 1.243756704 1.210457033 1.143466287 1.071422037 1.069398564 1 13.14729751 -8.257933742 1.579928084 1.009643699 1.137355514 0.392483059 0.0530867 0.434533348 2.057580118 0.05684373 0.017239155 5.52E-09 8.257933742 0.127711815 DAPTS(ph)PASVASSSSTPSSK ddPTM_A459_MK2206_30min_R2 3 DAPTSPASVASSSSTPSSK 19 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 DAPT(0.121)S(0.852)PAS(0.026)VAS(0.001)SSSTPSSK;DAPT(0.002)S(0.989)PAS(0.009)VASSSSTPSSK;DAPT(0.012)S(0.986)PAS(0.002)VASSSSTPSSK 290.92 1.80E-85 104337000 97099 110819 102228 119765 100409 100208 109603 89865 95935 102316 TRUE FALSE 104532.9741 105315.8896 105636.2305 109979.8164 96466.43815 104021.4857 95211.99444 101610.6641 104279.2529 98977.4373 1.056129326 1.064039366 1.06727587 1.111160476 0.97463059 1.050961598 0.961956553 1.026604313 1.053565901 1 16.59481207 -6.261604288 24.9999994 1.012133967 1.073366453 0.507129093 0.030585437 12.98664054 1968622.63 0.009102511 0.011003499 5.48E-07 6.261604288 0.061232486 DAPVHGS(ph)PTGPGAWTASK ddPTM_A459_MK2206_30min_R1 1 DAPVHGSPTGPGAWTASK 18 0 Q9BRP1 Q9BRP1 PDCD2L Programmed cell death protein 2-like 1 DAPVHGS(0.952)PT(0.048)GPGAWTASK 227.46 1.13E-18 4293400 910.4 945.59 933.39 951.12 1018.7 691.37 893.19 664.29 692.06 859.04 TRUE FALSE 832.9656993 884.0319191 870.0340874 1024.375427 978.1230219 730.5147719 833.6069248 658.4821826 764.0021136 965.4643606 0.862761727 0.915654637 0.901156089 1.061018375 1.013111474 0.756646026 0.86342589 0.682036758 0.791331244 1 9.915079194 -6.765142076 24.99797863 0.801611391 0.952163115 0.325999078 0.093325307 103.3592465 697802.9458 0.032281726 0.029567351 1.72E-07 6.765142076 0.150551724 DAPVHGS(ph)PTGPGAWTASK ddPTM_A459_MK2206_30min_R2 3 DAPVHGSPTGPGAWTASK 18 0 Q9BRP1 Q9BRP1 PDCD2L Programmed cell death protein 2-like 1 DAPVHGS(0.971)PT(0.029)GPGAWTASK;DAPVHGS(0.986)PT(0.014)GPGAWTASK;DAPVHGS(0.979)PT(0.021)GPGAWTASK 151.22 8.27E-05 29262300 182857 213748 197248 217042 240414 204063 233943 192728 194732 215392 TRUE FALSE 196856.6725 203133.5851 203824.1499 199308.9743 230974.1384 211828.7605 203226.0031 217918.2113 211669.4374 208363.7767 0.94477397 0.974898749 0.978212975 0.956543299 1.108513879 1.016629492 0.97534229 1.045854586 1.015864853 1 17.66874497 DAQELYAAGENR ddPTM_A459_MK2206_30min_R2 1 DAQELYAAGENR 12 0 P50995-2;P50995 P50995-2 ANXA11 Annexin A11 0 123.95 0.043935 6352200 15569 19222 19490 23826 19290 23578 20597 12643 16368 18013 FALSE TRUE 16760.97461 18267.46343 20139.78687 21879.33958 18532.57768 24475.27731 17892.58916 14295.48351 17791.65905 17425.23729 0.961879275 1.048333697 1.155782647 1.255612146 1.063548081 1.404587892 1.026820402 0.820389604 1.021028223 1 14.08889068 -7.517209051 24.93320534 0.937146314 1.150996505 0.351109982 0.124035086 265.8279259 1169029.371 0.056972334 0.034230059 3.04E-08 7.517209051 0.213850191 DAQHYGGWEHR ddPTM_A459_MK2206_30min_R1 4 DAQHYGGWEHR 11 0 F5H6X6;Q14697;Q14697-2;E9PKU7 F5H6X6 GANAB Neutral alpha-glucosidase AB 0 ;;; 145.14 0.00039883 107746000 22854.1 19400.3 21653.5 19710 24880.2 21912.8 23684.2 20041.1 16152.2 15122.1 FALSE TRUE 20910.23878 18137.33694 20183.72075 21228.06762 23889.16895 23153.4838 22104.27023 19865.88278 17831.27899 16995.53991 1.230336835 1.067182157 1.187589265 1.249037555 1.405614006 1.362327053 1.300592411 1.168888007 1.049174023 1 14.05286857 -8.175013916 2.508993964 1.009285123 1.256347992 0.523262798 0.088297875 0.276006649 3.109922921 0.091677423 0.027758468 6.68E-09 8.175013916 0.247062869 DAQHYGGWEHR ddPTM_A459_MK2206_30min_R2 4 DAQHYGGWEHR 11 0 F5H6X6;Q14697;Q14697-2;E9PKU7 F5H6X6 GANAB Neutral alpha-glucosidase AB 0 ;;; 125.36 0.0018979 58070300 171173 204651 141988 184347 189205 185089 164818 135921 161750 143504 FALSE TRUE 184278.1365 194488.3289 146721.8091 169285.2604 181775.861 192132.6916 143177.1986 153686.3414 175818.7226 138821.4762 1.327446887 1.400995971 1.056910019 1.219445759 1.309421755 1.384027146 1.03137643 1.107079002 1.26650953 1 17.08287125 -14.35116704 0.046459068 1.48E-09 1.762378203 0.319877433 0.117720915 801.0456472 2.831579551 104.1992649 26.72538899 4.45E-15 14.35116704 1.762378201 DAQNSSDSS(ph)FEK ddPTM_A459_MK2206_30min_R2 1 DAQNSSDSSFEK 12 0 Q6PL18 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 DAQNSS(0.001)DS(0.23)S(0.768)FEK 134.4 0.0029162 0 32235 29877 27235 26963 24751 21729 32891 28772 19860 28609 TRUE FALSE 34702.93638 28393.35163 28143.00131 24760.03665 23779.15138 22555.91232 28572.37219 32532.59919 21587.3869 27675.49067 1.253923076 1.025938509 1.016892587 0.894655742 0.859213362 0.815013999 1.032407068 1.175502164 0.780018217 1 14.75632128 -4.489263406 1.376560311 0.943437306 1.596960842 0.417551077 0.110245559 2.659402488 2.70169582 0.033121131 2.931673162 3.24E-05 4.489263406 0.653523536 DAQRLS(ph)PIPEEVPK ddPTM_A459_MK2206_30min_R1 4 DAQRLSPIPEEVPK 14 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK 122.16 0.0086165 140171300 21911.9 22887.4 23087.6 17515.8 17647.3 17170.3 21757.4 17772.7 24109.5 26926.1 TRUE FALSE 20048.17784 21397.4261 21520.47804 18864.86995 16944.37067 18142.46755 20306.00354 17617.31516 26615.7688 30261.90855 0.662488878 0.707074574 0.711140806 0.623386655 0.559924059 0.599514982 0.671008688 0.582161404 0.879513887 1 14.88521536 -8.428794462 3.735090382 0.996984867 0.641180395 0.862842034 0.0488691 0.078706583 1.947010229 0.052090961 0.013746836 3.73E-09 8.428794462 -0.355804472 DAQRLS(ph)PIPEEVPK ddPTM_A459_MK2206_30min_R2 1 DAQRLSPIPEEVPK 14 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 DAQRLS(1)PIPEEVPK 106.6 0.025967 22046000 70365 63138 69249 68736 55251 49234 81223 62853 52218 65426 TRUE FALSE 75752.1985 60002.65873 71557.7271 63120.04892 53081.56813 51107.63437 70558.32253 71068.10291 56759.82725 63291.15498 1.196884439 0.948041772 1.130611807 0.997296525 0.838688568 0.807500422 1.114821219 1.122875747 0.896805048 1 15.94971627 -2.182357575 1.277948775 0.981260876 199.9754145 0.235180407 0.110708712 2441.185568 5.500548864 0.035132636 1422376.533 0.006571166 2.182357575 198.9941536 DAS(ph)EETSTSVMQK ddPTM_A459_MK2206_30min_R1 2 DASEETSTSVMQK 13 0 Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70;M0QYR7;M0R2N0;M0QZC7 Q9H0W8-2 SMG9 Protein SMG9 1 DAS(0.917)EET(0.082)STS(0.001)VMQK;DAS(0.998)EET(0.002)STSVMQK 190.34 0.00014551 21793000 8560.1 7700.1 9444.2 7759 7657.6 6173.7 7914.3 8493.5 8673.1 8046.1 TRUE FALSE 7832.018544 7198.82209 8803.154017 8356.599524 7352.581577 6523.249559 7386.351487 8419.242225 9574.699782 9042.911613 0.86609478 0.796073477 0.973486681 0.924104966 0.813076793 0.721366064 0.8168112 0.931032237 1.058807184 1 13.14257165 -8.013828791 3.778851434 1.025475504 0.845210221 0.550156526 0.066908351 0.191218521 5.884717038 0.052063637 0.019817791 9.69E-09 8.013828791 -0.180265283 DAS(ph)PINR ddPTM_A459_MK2206_30min_R2 1 DASPINR 7 0 Q13523;H0YDJ3 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 DAS(1)PINR 99.013 0.021486 31803000 181060 100410 125880 145100 91908 78080 169710 108930 86673 163870 TRUE FALSE 194922.0928 95423.78541 130076.7764 133244.8658 88299.23012 81051.38911 147426.8731 123167.525 94211.66087 158522.9353 1.229614456 0.601955706 0.820554932 0.840539986 0.557012334 0.511291246 0.930003427 0.776969747 0.594309339 1 17.27433206 -4.752405315 24.99549219 0.729196306 1.229615421 0.467492042 0.157543308 315.0840665 871712.4142 0.038740834 0.46404641 1.77E-05 4.752405315 0.500419116 DAS(ph)PTPSTDAEYPANGSGADR ddPTM_A459_MK2206_30min_R1 2 DASPTPSTDAEYPANGSGADR 21 0 E9PEE2;E7EPF5;O43639 E9PEE2 NCK2 Cytoplasmic protein NCK2 1 DAS(0.995)PT(0.001)PS(0.001)T(0.003)DAEYPANGSGADR;DAS(1)PTPSTDAEYPANGSGADR 325.19 7.59E-137 22124000 1664.14 1743.51 1663.83 1492.45 1394.21 1594.42 1774.1 1555.89 1243.72 1376.43 TRUE FALSE 1522.596154 1630.007182 1550.893855 1607.398758 1338.675663 1684.694683 1655.753026 1542.287018 1373.009145 1546.95254 0.984255247 1.053689199 1.002547793 1.039074384 0.865363112 1.089040962 1.070332142 0.996984056 0.887557381 1 10.59521322 -8.019691511 23.65888325 0.943275987 1.015355005 0.162931546 0.06358867 677.5486273 814050.358 0.041328634 0.016160515 9.56E-09 8.019691511 0.072079017 DAS(ph)PTPSTDAEYPANGSGADR ddPTM_A459_MK2206_30min_R2 2 DASPTPSTDAEYPANGSGADR 21 0 E9PEE2;E7EPF5;O43639 E9PEE2 NCK2 Cytoplasmic protein NCK2 1 DAS(1)PTPSTDAEYPANGSGADR;DAS(0.995)PT(0.003)PS(0.001)TDAEYPANGSGADR 252.58 3.67E-39 42163000 51311 63684 53070 57250 54107 43229 59586 49704 54576 53957 TRUE FALSE 55239.40961 60521.54517 54839.32731 52572.49187 51982.48731 44874.10989 51762.28662 56200.48346 59322.92183 52196.38751 1.058299477 1.159496817 1.050634535 1.007205563 0.995902012 0.859716774 0.991683316 1.076712128 1.136533095 1 15.67166234 -5.523165943 4.061093075 1.005927269 1.109467407 0.239122134 0.070023895 0.303175171 11.57354015 0.021008933 0.041880899 3.00E-06 5.523165943 0.103540138 DASLHGLSQYNS(ph)L ddPTM_A459_MK2206_30min_R1 1 DASLHGLSQYNSL 13 0 Q9Y4B5-4 Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 DASLHGLS(0.003)QY(0.003)NS(0.994)L 87.831 0.024608 5500400 4254.6 2756.8 3411.2 2465.6 4292.1 3713.8 3813.1 3388 2616.4 2251.1 TRUE FALSE 3892.723928 2577.331819 3179.657248 2655.500939 4121.136568 3924.072147 3558.735056 3358.379073 2888.384143 2529.983263 1.538636237 1.018714968 1.256789835 1.049612058 1.628918511 1.551026919 1.406623952 1.32743134 1.141661364 1 11.30491213 -8.437617928 2.634871786 1.00323116 1.342605162 0.264713941 0.191428277 0.38514592 5.545125264 0.194156747 0.052811016 3.65E-09 8.437617928 0.339374002 DASLHGLSQYNS(ph)L ddPTM_A459_MK2206_30min_R2 2 DASLHGLSQYNSL 13 0 Q9Y4B5-4 Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 DASLHGLS(0.094)QY(0.015)NS(0.891)L;DASLHGLS(0.04)QY(0.06)NS(0.9)L 78.985 0.039996 34926000 90680 151896 122320 193881 179487 190302 170538 130441 154250 111285 TRUE FALSE 97622.53052 144353.0655 126398.0877 178040.3021 172439.4385 197544.076 148146.1557 147490.0866 167666.3862 107653.7796 0.906819351 1.340901045 1.174116582 1.65382305 1.601796418 1.834994338 1.376135203 1.370040951 1.557459356 1 16.71603945 -4.560952551 1.081347735 1.500357305 0.422590704 0.337047059 0.226667468 2.823138536 1.990457934 0.070503691 3.90736268 2.75E-05 4.560952551 -1.0777666 DASS(ph)SPASTASSASSTSLK ddPTM_A459_MK2206_30min_R2 2 DASSSPASTASSASSTSLK 19 0 A0A669KBK8;Q04724 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 DAS(0.001)S(0.824)S(0.175)PASTASSASSTSLK;DAS(0.039)S(0.481)S(0.481)PASTASSASSTSLK 320.5 4.50E-135 110758000 92983 102641 98098 101754 103165 82277 114098 85936 74664 105466 TRUE FALSE 100101.85 97543.99719 101368.5384 93440.37271 99114.22374 85408.10889 99116.79554 97168.13026 81158.13976 102024.6531 0.981153544 0.956082616 0.993569057 0.915860725 0.971473274 0.837132069 0.971498482 0.952398537 0.795475773 1 16.63855828 -6.028030992 1.564386739 0.914883484 0.974700412 0.137103386 0.060590966 0.772990553 3.81238502 0.020238566 0.033837927 9.37E-07 6.028030992 0.059816928 DASSS(ph)PASTASSASSTSLK ddPTM_A459_MK2206_30min_R1 4 DASSSPASTASSASSTSLK 19 0 A0A669KBK8;Q04724 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 DASS(0.001)S(0.998)PASTASSASSTSLK;DASS(0.095)S(0.905)PASTASSASSTSLK;DASS(0.081)S(0.919)PASTASSASSTSLK;DASS(0.063)S(0.937)PASTASSASSTSLK 357.92 1.66E-216 161662000 22185.2 20063.8 20707.4 19072.6 19602.9 16746.3 20168.3 20103.4 18382.9 16976.8 TRUE FALSE 20298.23224 18757.64297 19301.83938 20541.57496 18822.07498 17694.46103 18822.90951 19927.63809 20293.86824 19080.01415 1.063847861 0.983104248 1.011626052 1.076601662 0.986481186 0.927381966 0.986524924 1.044424702 1.06361914 1 14.21977462 -11.63386372 2.406946389 0.97568268 1.013146469 0.007919075 0.044500732 182628330.5 23737858.85 24467817.12 0.011842267 2.32E-12 11.63386372 0.037463789 DASSS(ph)PASTASSASSTSLK ddPTM_A459_MK2206_30min_R2 2 DASSSPASTASSASSTSLK 19 0 A0A669KBK8;Q04724 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 DAS(0.014)S(0.061)S(0.911)PAS(0.01)T(0.003)AS(0.001)SASSTSLK;DAS(0.007)S(0.049)S(0.944)PASTASSASSTSLK 122.46 0.00042046 109976000 163493 182113 175436 181038 178129 161332 210053 146340 144733 176945 TRUE FALSE 176010.1498 173069.5332 181284.9487 166246.6163 171134.7604 167471.6023 182472.7888 165467.1405 157321.6147 171171.2991 1.028269054 1.011089675 1.059084961 0.971229506 0.999786537 0.978385998 1.066024443 0.966675729 0.919088746 1 17.38508129 -6.760306791 0.478806296 0.970659637 1.030045423 0.185673987 0.037991428 2.081777803 1.009953072 0.036671708 0.051227676 1.74E-07 6.760306791 0.059385786 DASVPLIDVTNLPT(ph)PR ddPTM_A459_MK2206_30min_R1 2 DASVPLIDVTNLPTPR 16 0 Q96A65;Q96A65-2 Q96A65 EXOC4 Exocyst complex component 4 1 DASVPLIDVTNLPT(1)PR;DASVPLIDVTNLPT(1)PR 210.2 1.12E-07 6958200 6291.9 5320.5 4510.1 4408.1 5405.5 4729.6 4978.9 4506.3 4496.3 4604.9 TRUE FALSE 5756.740865 4974.134483 4203.966978 4747.612626 5190.187489 4997.385865 4646.766666 4466.901894 4963.706475 5175.389777 1.112329914 0.961113017 0.812299587 0.917343974 1.002859246 0.965605699 0.8978583 0.86310444 0.959098095 1 12.33745181 -7.251083543 23.85749453 0.918607245 0.95492137 0.026110436 0.077946383 1509.116703 3476664.929 0.031638119 0.024193873 5.61E-08 7.251083543 0.036314125 DASVPLIDVTNLPT(ph)PR ddPTM_A459_MK2206_30min_R2 2 DASVPLIDVTNLPTPR 16 0 Q96A65;Q96A65-2 Q96A65 EXOC4 Exocyst complex component 4 1 DASVPLIDVTNLPT(1)PR;DASVPLIDVTNLPT(1)PR 180.32 2.39E-06 10032600 58911 60792 51103 69239 59052 62783 58489 44272 46608 53565 TRUE FALSE 63421.27145 57773.15768 52806.74851 63581.95222 56733.32177 65172.25106 50809.32404 50058.50241 50661.87959 51817.17844 1.223942974 1.114942176 1.019097336 1.22704389 1.094874779 1.257734462 0.980549802 0.966059981 0.977704327 1 15.66114284 -7.290958078 23.03294299 0.978250059 1.148584758 0.618702882 0.06720058 186.4148615 145455.0015 0.027740137 0.018707548 5.12E-08 7.290958078 0.1703347 DAT(ph)PPVS(ph)PINMEDQER ddPTM_A459_MK2206_30min_R2 1 DATPPVSPINMEDQER 16 0 P17275 P17275 JUNB Transcription factor jun-B 2 DAT(1)PPVS(1)PINMEDQER 152.9 0.0068647 0 9063.5 10848 9654.1 10863 7592.7 6285.4 10740 8221 10428 10208 TRUE FALSE 9757.408529 10309.30409 9975.962876 9975.458151 7294.572448 6524.595301 9329.825099 9295.512927 11335.00859 9874.913796 0.988100629 1.043989275 1.010232908 1.010181796 0.738697329 0.660724279 0.944800663 0.941325982 1.147858991 1 13.26955244 -10.93391668 14.74930751 0.999996635 0.93552033 0.013055521 0.13606844 6.92E-10 0 0.145040071 0.035177384 1.16E-11 10.93391668 -0.064476306 DAT(ph)PPVSPINMEDQER ddPTM_A459_MK2206_30min_R1 1 DATPPVSPINMEDQER 16 0 P17275 P17275 JUNB Transcription factor jun-B 1 DAT(1)PPVSPINMEDQER 99.238 0.015568 3656000 511.22 747.81 748.71 602.05 710.1 540.15 583.46 526.03 630.74 564.49 TRUE FALSE 467.7380545 699.1274331 697.8896512 648.4199953 681.8152133 570.7328262 544.538448 521.4309752 696.3076801 634.4232829 0.737264957 1.101988927 1.100037893 1.022062104 1.074700806 0.899608891 0.858320403 0.821897602 1.097544335 1 9.309301908 -6.774829304 24.986621 0.919520715 1.018458503 0.069071268 0.121540155 489.4991856 913437.0037 0.04233343 0.037536394 1.68E-07 6.774829304 0.098937788 DAT(ph)PPVSPINMEDQER ddPTM_A459_MK2206_30min_R2 1 DATPPVSPINMEDQER 16 0 P17275 P17275 JUNB Transcription factor jun-B 1 DAT(1)PPVSPINMEDQER 118.2 0.0041656 2872100 6341.5 7985.7 10833 10320 8031.8 8298.6 9533.8 8234.8 8150.4 8925.1 TRUE FALSE 6827.010116 7589.14175 11194.16681 9476.822988 7716.431175 8614.409038 8282.000608 9311.116634 8859.307059 8633.874718 0.790723787 0.878996047 1.296540334 1.097632673 0.893739072 0.997745429 0.959244937 1.078440091 1.026110217 1 13.07579244 -5.015892921 24.56940937 1.041689901 0.812791705 0.416411208 0.101249404 496.9242964 768221.6186 0.027092533 0.076901623 9.64E-06 5.015892921 -0.228898196 DATNVGDEGGFAPNILENK ddPTM_A459_MK2206_30min_R1 2 DATNVGDEGGFAPNILENK 19 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 349.54 5.06E-193 35219000 4869 4908.2 5071.4 4492.9 4603.2 4224 4042.6 4344.5 4013 3745.8 FALSE TRUE 4454.865982 4588.675288 4727.167498 4838.943936 4419.844797 4463.15923 3772.92553 4306.516495 4430.165711 4209.857983 1.058198637 1.089983393 1.122880514 1.149431633 1.049879786 1.060168597 0.896212068 1.022960041 1.052331392 1 12.03955585 -6.789677721 2.379974969 0.995100967 1.102959687 0.505153575 0.046584554 0.242880315 2.820982908 0.018526798 0.016821444 1.62E-07 6.789677721 0.10785872 DATNVGDEGGFAPNILENK ddPTM_A459_MK2206_30min_R2 4 DATNVGDEGGFAPNILENK 19 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ;;; 193.31 3.71E-14 32886200 146198 159543 159153 163963 170553 138497 182667 144890 147336 176065 FALSE TRUE 157391.0313 151620.3266 164459.0816 150566.6984 163856.2323 143767.6004 158682.6035 163827.6205 160151.019 170320.0135 0.924090059 0.890208517 0.965588707 0.884022349 0.962049197 0.844102801 0.931673268 0.961881209 0.940294776 1 17.37788844 -8.412389415 1.000510747 0.996537684 0.914022128 0.337175457 0.035884971 0.59110939 1.292118335 0.032596639 0.011014288 3.87E-09 8.412389415 -0.082515556 DAVAHCHEAER ddPTM_A459_MK2206_30min_R1 2 DAVAHCHEAER 11 0 P49792;H0YBN8;Q99666;O14715;J3KQ37;F8W705;Q99666-2 P49792;Q99666 RANBP2;RGPD8;RGPD5 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 0 ; 127.83 0.0016313 1756990 2082.77 2067.32 1876.49 1818.34 1359.99 1514.25 2457.1 2183.6 265.84 1678.31 FALSE TRUE 1905.619474 1932.737092 1749.119087 1958.388862 1305.818718 1599.985526 2293.191342 2164.509015 293.4750193 1886.231713 1.010278568 1.024655178 0.927308705 1.038254658 0.692289664 0.84824442 1.215752723 1.147530815 0.155588 1 10.8812912 -5.689475648 0.35257033 0.827935178 1.089121743 0.053924238 0.278213315 14.15575095 2.263862561 0.294318678 1.493607991 2.04E-06 5.689475648 0.261186564 DAVTYTEHAK ddPTM_A459_MK2206_30min_R2 1 DAVTYTEHAK 10 0 P62805 P62805 HIST1H4A Histone H4 0 175.65 8.11E-05 4979100 66656 62729 86544 77116 57088 52888 85370 58834 81750 52932 FALSE TRUE 71759.23461 59613.96908 89429.33377 70815.37612 54846.43828 54900.6899 74160.81645 66523.80581 88860.46723 51204.83317 1.40141526 1.164225433 1.746501809 1.382982264 1.071118386 1.072177888 1.448316728 1.299170443 1.735392183 1 15.64399237 -11.6769098 2.376905527 0.169815551 1.357305707 0.192433023 0.225648337 6158515.395 1732983.031 27538692.23 0.057834931 2.10E-12 11.6769098 1.187490156 DAYSGGAVNLYHVR ddPTM_A459_MK2206_30min_R2 1 DAYSGGAVNLYHVR 14 0 P28074;P28074-3 P28074 PSMB5 Proteasome subunit beta type-5 0 199.96 0.00010645 4176600 29946 35878 31812 45635 36747 39995 33924 30871 40926 37802 FALSE TRUE 32238.68878 34096.35069 32872.5962 41906.47452 35304.12814 41517.03775 29469.73805 34905.9457 44485.6695 36568.52384 0.881596668 0.932396146 0.898931451 1.145971183 0.965423934 1.135321675 0.805877158 0.954535268 1.216501648 1 15.15831477 -5.663898078 24.61375229 1.022225127 0.90711021 0.215135487 0.11059558 21.69366862 5454.538941 0.029994134 0.051951353 2.17E-06 5.663898078 -0.115114918 DCCVEPGTELS(ph)PTLPHQL ddPTM_A459_MK2206_30min_R1 1 DCCVEPGTELSPTLPHQL 18 0 Q14012 Q14012 CAMK1 Calcium/calmodulin-dependent protein kinase type 1 1 DCCVEPGT(0.092)ELS(0.888)PT(0.019)LPHQL 95.57 0.008299 0 837.64 423.08 533.6 424.73 948.55 1215.5 818.85 643.33 482.94 377.13 TRUE FALSE 766.3943194 395.5374151 497.3807187 457.4427782 910.7672449 1284.32056 764.2260106 637.7054336 533.1433412 423.8517116 1.808166154 0.933197636 1.173478141 1.079251931 2.148787465 3.030117667 1.803050429 1.504548445 1.257853458 1 8.727415803 -6.254524473 24.92500161 1.87853945 1.220639789 0.172316079 0.561412686 842.0458271 3035179.622 0.177024124 0.223524316 5.57E-07 6.254524473 -0.657899662 DCCVEPGTELS(ph)PTLPHQL ddPTM_A459_MK2206_30min_R2 1 DCCVEPGTELSPTLPHQL 18 0 Q14012 Q14012 CAMK1 Calcium/calmodulin-dependent protein kinase type 1 1 DCCVEPGT(0.045)ELS(0.894)PT(0.061)LPHQL 77.387 0.01381 4070100 7051.6 13596 11611 7402.3 9839.7 7789.8 11753 10852 7583.5 8894.3 TRUE FALSE 7591.475918 12920.84241 11998.10494 6797.508411 9453.343937 8086.246298 10209.81698 12270.39366 8243.099122 8604.079719 0.882311202 1.501711145 1.394466966 0.790033174 1.098704829 0.939815362 1.186625103 1.426113432 0.958045415 1 13.07080518 -5.717454588 24.99992137 1.077051385 1.283717844 0.146056747 0.218299445 262.2422017 149050.2909 0.059708182 0.103416853 1.92E-06 5.717454588 0.206666459 DCCVEPGTELSPT(ph)LPHQL ddPTM_A459_MK2206_30min_R2 1 DCCVEPGTELSPTLPHQL 18 0 Q14012 Q14012 CAMK1 Calcium/calmodulin-dependent protein kinase type 1 1 DCCVEPGT(0.004)ELS(0.353)PT(0.643)LPHQL 90.434 0.013443 3693200 15168 15581 14297 15478 15595 12268 13482 12136 11408 15958 TRUE FALSE 16329.27374 14807.2702 14773.65484 14213.39789 14982.66194 12734.86734 11711.79721 13722.21687 12400.24722 15437.29177 1.057780988 0.959188336 0.957010794 0.920718355 0.970549897 0.824941805 0.758669162 0.888900532 0.803265716 1 13.91413206 -6.75723833 24.95492602 0.842181326 0.968481276 0.421703823 0.06808324 94.58494851 561850.0009 0.022036814 0.021290297 1.75E-07 6.75723833 0.12629995 DCDLQEDACYNCGR ddPTM_A459_MK2206_30min_R2 2 DCDLQEDACYNCGR 14 0 P62633-2;P62633;P62633-7;P62633-3 P62633-2 CNBP Cellular nucleic acid-binding protein 0 ; 291.22 1.54E-65 16895000 59326 39470 44242 49528 39369 41064 57258 51189 36471 55676 FALSE TRUE 63868.04417 37509.97719 45717.0062 45481.40397 37823.17525 42626.71929 49739.95582 57879.57806 39643.18166 53859.29668 1.185831381 0.696443873 0.848822933 0.844448531 0.702258989 0.791445896 0.923516624 1.074644149 0.73605086 1 15.71690777 -11.19360231 8.321793783 1.000251878 0.86152855 0.064124468 0.151050402 0.000689141 2.73E-05 0.142785734 0.034568552 6.40E-12 11.19360231 -0.138723327 DCDLQEDEACYNCGR ddPTM_A459_MK2206_30min_R2 1 DCDLQEDEACYNCGR 15 0 P62633-8;P62633-4 P62633-8 CNBP Cellular nucleic acid-binding protein 0 278.35 6.36E-54 4220100 5407.3 4334.7 6447.1 7539.5 6457.8 4293.1 5701.5 6196.9 4140.2 5576.6 FALSE TRUE 5821.287046 4119.445101 6662.043096 6923.498732 6204.234324 4456.476929 4952.886201 7006.856107 4500.307112 5394.635999 1.079088014 0.763618732 1.23493839 1.283404243 1.15007469 0.826094092 0.918113141 1.298856143 0.834218864 1 12.3973099 DCDPGS(ph)PR ddPTM_A459_MK2206_30min_R1 2 DCDPGSPR 8 0 Q00341;Q00341-2;A0A024R4E5;H0Y394 Q00341 HDLBP Vigilin 1 DCDPGS(1)PR;DCDPGS(1)PR 122.94 0.0061569 31330100 30640 25883 16861.1 17139.7 14537.3 11927 23932 24545.8 1063.4 13411.6 TRUE FALSE 28033.9071 24198.012 15716.61551 18459.80266 13958.24856 12602.29643 22335.53995 24331.19866 1173.944235 15073.13026 1.859859672 1.605374038 1.042690884 1.224682753 0.926035158 0.836076927 1.481811645 1.61421007 0.077883241 1 13.87969143 -5.116197536 2.425804976 1.054471063 1.867378037 0.345474205 0.394001288 0.388754 4.094434469 0.104968226 0.479875963 7.65E-06 5.116197536 0.812906974 DCDPGS(ph)PR ddPTM_A459_MK2206_30min_R2 2 DCDPGSPR 8 0 Q00341;Q00341-2;A0A024R4E5;H0Y394 Q00341 HDLBP Vigilin 1 DCDPGS(1)PR;DCDPGS(1)PR 94.409 0.022719 182866000 150466 143273 134253 168491 180312 127090 169539 177197 177005 170138 TRUE FALSE 161985.7926 136158.2712 138728.928 154724.7463 173232.0449 131926.499 147278.3256 200357.2563 192400.5749 164586.411 0.98419907 0.827275292 0.84289418 0.940082145 1.052529451 0.801563739 0.894838916 1.217337781 1.168994292 1 17.3284857 -7.752038849 24.97673228 1.144874529 0.90363432 0.573284358 0.087650475 123.9374684 329297.7892 0.042036798 0.023852975 1.77E-08 7.752038849 -0.24124021 DCES(ph)PNSISIMGLNTSR ddPTM_A459_MK2206_30min_R2 1 DCESPNSISIMGLNTSR 17 0 Q9HCI5 Q9HCI5 MAGEE1 Melanoma-associated antigen E1 1 DCES(0.777)PNS(0.167)IS(0.055)IMGLNTSR 96.143 0.0061113 2953600 4654.2 5842.1 6331.2 6410 3561.6 6573.3 9544.7 1975.4 2235.9 7031.7 TRUE FALSE 5010.52913 5551.989809 6542.279048 5886.282495 3421.753688 6823.451538 8291.469425 2233.591563 2430.37454 6802.256205 0.73659812 0.816198279 0.961780746 0.865342663 0.503032168 1.003115927 1.218929304 0.328360399 0.357289474 1 12.73179763 -7.780226799 24.99998596 0.507118745 0.864017838 0.242763222 0.245160908 315.9497608 420421.0761 0.132866974 0.063998771 1.66E-08 7.780226799 0.356899093 DCEYQQISPGAAPLPAS(ph)PGAR ddPTM_A459_MK2206_30min_R2 4 DCEYQQISPGAAPLPASPGAR 21 0 Q9NUE0 Q9NUE0 ZDHHC18 Palmitoyltransferase ZDHHC18 1 DCEYQQISPGAAPLPAS(1)PGAR;DCEYQQISPGAAPLPAS(1)PGAR;DCEYQQISPGAAPLPAS(1)PGAR;DCEYQQISPGAAPLPAS(1)PGAR 203.2 5.84E-32 3354400 46725.5 27433 38724.8 38206 41024.6 36965.5 52394.4 26702.1 46873.1 45259 TRUE FALSE 50302.84021 26070.71711 40015.8655 35084.44759 39413.76807 38372.24801 45514.95234 30192.15615 50950.03751 43782.20254 1.148933523 0.59546381 0.913975615 0.801340398 0.900223511 0.876434848 1.039576579 0.689598842 1.163715724 1 15.41805691 -8.278207424 24.96123667 1.08185787 0.867455198 0.232255986 0.153479374 1253.634839 1866166.593 0.134289467 0.035050938 5.27E-09 8.278207424 -0.214402673 DCGATWVVLGHSER ddPTM_A459_MK2206_30min_R1 4 DCGATWVVLGHSER 14 0 P60174;P60174-3;P60174-4;U3KPZ0;U3KQF3;U3KPS5 P60174 TPI1 Triosephosphate isomerase 0 ;;; 147.39 0.00067376 129123000 16842.81 17641.9 17189.8 15326.65 18278.53 16465.44 17412.23 15025.75 14534.89 13938.39 FALSE TRUE 15410.24056 16493.4091 16023.00427 16507.11124 17550.45744 17397.69898 16250.69191 14894.38145 16045.84383 15665.18298 0.983725538 1.052870504 1.02284182 1.053745191 1.120348065 1.110596602 1.03737645 0.950795242 1.024299802 1 13.935274 -7.553467821 10.49292359 0.991247719 1.059588216 0.34544917 0.04035333 0.551894556 183.7341172 0.020259956 0.011723607 2.80E-08 7.553467821 0.068340498 DCGATWVVLGHSER ddPTM_A459_MK2206_30min_R2 2 DCGATWVVLGHSER 14 0 P60174;P60174-3;P60174-4;U3KPZ0;U3KQF3;U3KPS5 P60174 TPI1 Triosephosphate isomerase 0 ; 119.77 0.0030398 118266000 191561 234180 186333 252519 225884 235190 225666 207691 209183 219640 FALSE TRUE 206227.0574 222550.9617 192545.2492 231887.3899 217014.6592 244140.3203 196035.7831 234836.9268 227377.3592 212473.1648 0.970602841 1.047430917 0.90620973 1.091372598 1.021374438 1.149040729 0.922637846 1.105254525 1.070146244 1 17.69692112 -5.781891911 24.99991002 1.053241107 0.982016072 0.213879853 0.066847631 366.3181707 447763.3776 0.017924274 0.026619372 1.65E-06 5.781891911 -0.071225035 DCLCQLCAQPMSSS(ph)PK ddPTM_A459_MK2206_30min_R1 2 DCLCQLCAQPMSSSPK 16 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;A0A494C1P1;A0A494C1G0 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 DCLCQLCAQPMSS(0.11)S(0.89)PK;DCLCQLCAQPMSS(0.19)S(0.81)PK 169.94 1.05E-05 13208700 2598.9 3364.6 3393.7 2708.79 1826.62 1890.93 2800.6 2476.4 3561 3877 TRUE FALSE 2377.849908 3145.563928 3163.345099 2917.421475 1753.861857 1997.992822 2613.777084 2454.749096 3931.178693 4357.31203 0.545714856 0.721904676 0.725985442 0.669546146 0.402510044 0.458537926 0.599859975 0.563363165 0.902202703 1 12.08922271 -8.354116736 3.695348418 0.993220428 0.587376821 0.686818968 0.099392034 0.147869503 3.523771742 0.106889184 0.028627072 4.42E-09 8.354116736 -0.405843607 DCLCQLCAQPMSSS(ph)PK ddPTM_A459_MK2206_30min_R2 4 DCLCQLCAQPMSSSPK 16 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;A0A494C1P1;A0A494C1G0 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 DCLCQLCAQPMSS(0.069)S(0.931)PK;DCLCQLCAQPMSS(0.084)S(0.916)PK;DCLCQLCAQPMSS(0.048)S(0.952)PK;DCLCQLCAQPMS(0.006)S(0.034)S(0.96)PK 163.44 0.00012117 26597800 202669 186289 194476 159690 162848 121124 211955 174697 133030 233644 TRUE FALSE 218185.4945 177038.1591 200959.7328 146642.8162 156453.7693 125733.4587 184125.0539 197530.4977 144600.7089 226020.2154 0.965336194 0.783284623 0.889122827 0.648803984 0.692211398 0.556292978 0.814639759 0.873950577 0.639768919 1 17.78609229 -4.387289853 1.098161916 0.742578628 1.255542898 0.174842295 0.128117739 5.956627478 3.321217604 0.03934158 4.364402159 4.10E-05 4.387289853 0.512964269 DCLIEDS(ph)DDEAGQS ddPTM_A459_MK2206_30min_R2 1 DCLIEDSDDEAGQS 14 0 H3BSW6;Q2VPK5-3;Q2VPK5;H3BPG4 H3BSW6 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 1 DCLIEDS(1)DDEAGQS 101.6 0.012258 0 15760 20989 18359 16124 19538 14571 21725 11447 17518 17946 TRUE FALSE 16966.59772 19946.71678 18971.0799 14806.61762 18770.83995 15125.50962 18872.4814 12943.1622 19041.68397 17360.42349 0.977314737 1.148976394 1.092777484 0.852894956 1.081243206 0.871263862 1.087097986 0.745555672 1.09684444 1 14.08351452 -5.726898282 24.85706127 0.957910827 1.080618387 0.161949456 0.114933599 269.5919544 194006.3542 0.028658302 0.049634731 1.88E-06 5.726898282 0.12270756 DCNS(ph)ESEVTK ddPTM_A459_MK2206_30min_R2 3 DCNSESEVTK 10 0 Q92628 Q92628 KIAA0232 Uncharacterized protein KIAA0232 1 DCNS(0.722)ES(0.278)EVTK;DCNS(0.824)ES(0.025)EVT(0.152)K;DCNS(0.777)ES(0.022)EVT(0.2)K 116.98 0.0061661 12679100 68352 80421 66530 76442 70829 60872 77078 58724 53156 71426 TRUE FALSE 73585.08167 76427.41008 68748.07699 70196.44407 68047.89757 63188.52662 66957.56601 66399.42843 57779.4128 69095.37547 1.064978389 1.106114694 0.994973636 1.015935489 0.984840116 0.914511661 0.969060021 0.960982236 0.836226917 1 16.07630153 -5.755379353 0.736875262 0.931132279 1.104522501 0.583763764 0.045747168 0.699201656 0.65435948 0.022411705 0.082103144 1.76E-06 5.755379353 0.173390222 DCS(ph)PTCWEQGK ddPTM_A459_MK2206_30min_R1 2 DCSPTCWEQGK 11 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 DCS(0.672)PT(0.328)CWEQGK;DCS(0.828)PT(0.172)CWEQGK 132.86 0.0019305 20052800 5364.4 5766.6 6263.9 5398.4 4831.5 4083.8 5208.6 5304.5 4873.2 4633.6 TRUE FALSE 4908.12961 5391.193292 5838.72392 5814.185703 4639.051124 4315.021227 4861.143798 5258.123316 5379.786579 5207.64535 0.942485381 1.035245861 1.121183093 1.116471133 0.890815486 0.828593527 0.933462913 1.00969305 1.033055482 1 12.34641549 -4.717052139 21.65576518 0.993930625 0.942482324 0.032518738 0.087382948 9830.941657 4794582.945 0.024992516 8.45273455 1.92E-05 4.717052139 -0.051448301 DCS(ph)PTCWEQGK ddPTM_A459_MK2206_30min_R2 3 DCSPTCWEQGK 11 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 DCS(0.997)PT(0.003)CWEQGK;DCS(0.98)PT(0.02)CWEQGK;DCS(0.995)PT(0.005)CWEQGK 199.4 1.94E-05 52924000 194850 197296 175244 188727 191787 147625 216455 172599 153713 202793 TRUE FALSE 209767.8658 187498.5675 181086.5475 173307.4004 184256.4787 153242.9728 188034.1985 195158.2819 167082.6789 196175.881 1.069284688 0.955767684 0.923082626 0.883428684 0.939241245 0.781150935 0.958498045 0.994812823 0.851698374 1 17.58178815 -4.700571724 1.911025572 0.912321024 1.141189594 0.350053677 0.062573139 1.136558292 3.721688268 0.016675295 0.49938823 1.99E-05 4.700571724 0.22886857 DCSYGAVT(ph)SPTSTLESR ddPTM_A459_MK2206_30min_R2 3 DCSYGAVTSPTSTLESR 17 0 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4;J3KRP9 Q9HCD6 TANC2 Protein TANC2 1 DCSYGAVT(0.428)S(0.428)PT(0.061)S(0.061)T(0.021)LES(0.001)R;DCSYGAVT(0.481)S(0.481)PT(0.032)S(0.005)T(0.001)LESR;DCS(0.011)YGAVT(0.497)S(0.328)PT(0.146)S(0.016)T(0.002)LESR 183.31 1.54E-07 118901400 101786 125376 114002 118224 82691 94856 96080 82097 82521 81554 TRUE FALSE 109578.8144 119150.0102 117802.7698 108564.721 79444.13585 98465.81155 83464.58059 92827.35978 89698.52742 78892.89966 1.388956609 1.510275458 1.493198631 1.376102558 1.006987146 1.24809472 1.057947939 1.176625022 1.136965783 1 16.26760784 -6.104572067 4.593583379 1.119144993 1.464667869 0.82117199 0.077700086 0.087865543 3.010124118 0.021955737 0.029057329 7.86E-07 6.104572067 0.345522876 DCSYGAVTS(ph)PTSTLESR ddPTM_A459_MK2206_30min_R1 2 DCSYGAVTSPTSTLESR 17 0 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4;J3KRP9 Q9HCD6 TANC2 Protein TANC2 1 DCSYGAVT(0.072)S(0.437)PT(0.437)S(0.041)T(0.012)LESR;DCSYGAVT(0.072)S(0.389)PT(0.389)S(0.115)T(0.034)LESR 230.96 1.89E-16 92328000 13901.7 12491.6 11677.9 9198 11612.6 9711 10879.1 10472.2 9341.1 8794.4 TRUE FALSE 12719.28741 11678.39457 10885.23668 9906.431554 11150.04555 10260.82843 10153.37509 10380.64266 10312.14077 9883.916666 1.286867124 1.181555345 1.101308019 1.002277932 1.128099915 1.038133847 1.027262312 1.050255988 1.043325346 1 13.27086713 -4.953917409 1.327219418 1.044547044 1.34769081 0.838972705 0.034689554 0.362697298 0.711325658 0.01021059 0.137228444 1.11E-05 4.953917409 0.303143766 DDAT(ph)PVRDEPMDAESITFK ddPTM_A459_MK2206_30min_R1 4 DDATPVRDEPMDAESITFK 19 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2;H3BSK8 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 DDAT(0.998)PVRDEPMDAES(0.001)ITFK;DDAT(1)PVRDEPMDAESITFK;DDAT(1)PVRDEPMDAESITFK;DDAT(1)PVRDEPMDAESITFK 120.25 0.00060568 66747000 16535.3 18329.4 16942.9 12698.5 13376.2 14255.2 18514.3 13671.5 20428 22423.9 TRUE FALSE 15128.8859 17136.15273 15792.86315 13676.54067 12843.39763 15062.3171 17279.24483 13551.97152 22551.5637 25201.94202 0.600306353 0.67995366 0.626652626 0.542678047 0.509619363 0.597664938 0.685631481 0.537735207 0.894834362 1 14.62124729 -8.387086296 3.946272715 0.994707838 0.599609335 0.864078411 0.056049237 0.078325826 1.970171311 0.057162263 0.015099151 4.10E-09 8.387086296 -0.395098503 DDAT(ph)PVRDEPMDAESITFK ddPTM_A459_MK2206_30min_R2 2 DDATPVRDEPMDAESITFK 19 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2;H3BSK8 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 DDAT(1)PVRDEPMDAESITFK;DDAT(1)PVRDEPMDAESITFK 88.637 0.0042783 34990000 146971 122904 122836 124360 106856 80213 134248 119814 77372 138511 TRUE FALSE 158223.2128 116800.7661 126931.2909 114199.3902 102660.2965 83265.56192 116621.0763 135474.1012 84101.6767 133991.3974 1.180846053 0.87170347 0.947309256 0.852288971 0.766170803 0.621424685 0.870362416 1.011065664 0.627664748 1 17.03178085 -1.5953536 0.940509136 0.818843367 200 0.389748669 0.128546331 1014.864167 2.146785479 0.041386694 434277.212 0.025389047 1.5953536 199.1811566 DDDYRGGGDRYEDR ddPTM_A459_MK2206_30min_R1 1 DDDYRGGGDRYEDR 14 2 E7EX17;P23588;P23588-2;F8VX11;F8VP89 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 73.022 0.031823 18511000 9165.6 8373.3 9301.4 11112 12725 8221 8001.2 10435 4028.2 1633.2 FALSE TRUE 8386.01759 7828.196648 8670.046883 11967.84817 12218.1363 8686.465916 7467.454547 10343.7679 4446.945805 1835.533146 4.568709428 4.26480811 4.723448826 6.520093735 6.656450923 4.732393928 4.068275511 5.635293439 2.42269981 1 10.84198345 -8.42524997 3.332491222 1.024589151 5.150674775 0.732611983 0.848397235 0.12552581 2.600080221 0.902402809 0.240217323 3.76E-09 8.42524997 4.126085623 DDEKEAEEGEDDRDS(ph)ANGEDDS ddPTM_A459_MK2206_30min_R1 1 DDEKEAEEGEDDRDSANGEDDS 22 2 G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;G3V2D6;P07910-3 G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 DDEKEAEEGEDDRDS(0.564)ANGEDDS(0.436) 52.329 0.044276 3204200 1087.7 1307.4 1165.8 864.8 663.21 703.64 1192.6 822.54 1641.7 2244.8 TRUE FALSE 995.1854033 1222.288022 1086.668744 931.4070458 636.7929413 743.4794887 1113.04383 815.3486195 1812.36059 2522.902771 0.394460466 0.484476864 0.43072161 0.369180714 0.252404868 0.294692089 0.441175872 0.323178772 0.718363232 1 11.30086889 -8.48314536 2.937146121 0.997929488 0.374538436 0.898218767 0.068474324 0.072947924 1.41606553 0.072679892 0.01947131 3.29E-09 8.48314536 -0.623391052 down DDEKEAEEGEDDRDSANGEDDS(ph) ddPTM_A459_MK2206_30min_R1 1 DDEKEAEEGEDDRDSANGEDDS 22 2 G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;G3V2D6;P07910-3 G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 DDEKEAEEGEDDRDS(0.024)ANGEDDS(0.976) 75.191 0.017535 0 687.8 803.57 1041.9 679.97 689.79 434.39 861.4 891.28 1112.5 1721.3 TRUE FALSE 629.2989982 751.2574469 971.1787309 732.3414072 662.3142036 458.9847864 803.9375777 883.4876329 1228.148356 1934.547639 0.325295167 0.388337527 0.502018514 0.37855951 0.342361279 0.237256905 0.415568767 0.45668952 0.634850407 1 10.91778054 -8.595543125 1.360541718 0.998515509 0.36910856 0.90410946 0.063358614 0.158596176 0.633348748 0.066183148 0.019877332 2.54E-09 8.595543125 -0.629406949 down DDEVS(ph)EDEEADQLR ddPTM_A459_MK2206_30min_R2 1 DDEVSEDEEADQLR 14 0 Q2T9J0-2;Q2T9J0 Q2T9J0-2 TYSND1 "Peroxisomal leader peptide-processing protease;Peroxisomal leader peptide-processing protease, 15 kDa form;Peroxisomal leader peptide-processing protease, 45 kDa form" 1 DDEVS(1)EDEEADQLR 110.55 0.0042148 1625900 5112.9 5536.5 4332.5 3806.7 3804.8 4359.7 4446.4 3900.7 4303.4 5975 TRUE FALSE 5504.347555 5261.565461 4476.943388 3495.680433 3655.404434 4525.611438 3862.582339 4410.534883 4677.701953 5780.036239 0.952303295 0.910299736 0.774552823 0.60478521 0.632418947 0.782972848 0.668262651 0.763063535 0.809285921 1 12.49686282 -5.274033088 3.523889878 0.732033452 0.940095954 0.29961423 0.105943787 0.240176645 6.422918571 0.027365938 0.073208807 5.32E-06 5.274033088 0.208062502 DDGDEEGLLTHS(ph)EEELEHSQDTDADDGALQ ddPTM_A459_MK2206_30min_R2 1 DDGDEEGLLTHSEEELEHSQDTDADDGALQ 30 0 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 DDGDEEGLLT(0.013)HS(0.666)EEELEHS(0.161)QDT(0.161)DADDGALQ 73.649 5.07E-05 6243000 9359.1 9397.8 8473.3 6928.4 8010.4 8100.7 8738.5 7132.4 8232.1 8619 TRUE FALSE 10075.63989 8931.118918 8755.795593 6362.327557 7695.871447 8408.977815 7591.124453 8064.629169 8948.113178 8337.762736 1.20843447 1.071164916 1.050137293 0.763073712 0.923013966 1.00854127 0.910451004 0.967241384 1.073203143 1 13.0254446 -5.069463002 1.90910855 0.949066221 1.210582253 0.480007921 0.081439083 0.407322529 2.335078016 0.023389572 0.154331041 8.52E-06 5.069463002 0.261516032 DDGDEEGLLTHSEEELEHS(ph)QDTDADDGALQ ddPTM_A459_MK2206_30min_R2 1 DDGDEEGLLTHSEEELEHSQDTDADDGALQ 30 0 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 DDGDEEGLLT(0.013)HS(0.296)EEELEHS(0.542)QDT(0.149)DADDGALQ 68.024 0.00024797 7049600 31598 35606 31783 35822 30118 28366 32042 21808 26694 31903 TRUE FALSE 34017.16717 33837.85782 32842.62936 32895.22801 28935.41599 29445.48801 27834.84691 24658.38048 29015.79587 30862.00772 1.10223442 1.096424384 1.064176694 1.065881012 0.937573999 0.954101505 0.90191303 0.798988216 0.940178492 1 14.9135443 -6.311668598 1.315376676 0.898458533 1.09700865 0.708097044 0.050073991 0.220771513 0.776936933 0.019749942 0.026774142 4.88E-07 6.311668598 0.198550117 DDGEMAAAGTFLHPFPSESVSDCVDS(ph)PPAAASGR ddPTM_A459_MK2206_30min_R2 2 DDGEMAAAGTFLHPFPSESVSDCVDSPPAAASGR 34 0 U3KPY3 U3KPY3 SSBP4 1 DDGEMAAAGT(0.001)FLHPFPS(0.173)ES(0.118)VS(0.118)DCVDS(0.588)PPAAAS(0.001)GR;DDGEMAAAGTFLHPFPS(0.04)ES(0.04)VS(0.051)DCVDS(0.863)PPAAAS(0.005)GR 75.942 5.57E-06 6756400 12324.7 15505.7 16129.5 18160.2 15540.3 12764.6 21595 11780 14733 16052.6 TRUE FALSE 13268.28851 14735.70949 16667.24948 16676.45357 14930.10974 13250.3658 18759.55056 13319.68645 16014.44971 15528.80498 0.854430752 0.948927461 1.073311791 1.073904502 0.961446149 0.853276593 1.208048564 0.857740597 1.031273799 1 13.92265919 -4.889402741 3.62911826 1.005096449 0.852634842 0.182953648 0.099123103 0.420272821 9.519561342 0.024396996 0.144156167 1.29E-05 4.889402741 -0.152461608 DDGLFSGDPNWFPK ddPTM_A459_MK2206_30min_R1 2 DDGLFSGDPNWFPK 14 0 P37802;P37802-2;X6RJP6 P37802 TAGLN2 Transgelin-2 0 ; 203.61 0.00046215 23222000 11512.5 10895.1 10696.2 12065.5 11907.4 10672.4 11381.7 10770.9 9609.3 10704.7 FALSE TRUE 10533.30142 10185.82701 9970.171745 12994.7869 11433.10304 11276.66207 10622.44756 10676.73116 10608.22112 12030.87905 0.875522177 0.846640297 0.828715151 1.080119486 0.950313189 0.937309902 0.882931955 0.887443977 0.881749461 1 13.55445444 DDGLFSGDPNWFPK ddPTM_A459_MK2206_30min_R2 2 DDGLFSGDPNWFPK 14 0 P37802;P37802-2;X6RJP6 P37802 TAGLN2 Transgelin-2 0 ; 167.18 0.0030371 11630800 67079 76111 70311 80280 69890 72374 76954 65134 69101 69688 FALSE TRUE 72214.61981 72331.43842 72655.13365 73720.8672 67145.76743 75128.24328 66849.84736 73647.23744 75111.28007 67414.08627 1.071209651 1.072942502 1.077744099 1.093552865 0.99601984 1.114429453 0.991630252 1.092460664 1.114177826 1 16.04076246 DDGS(ph)WEVIEGYR ddPTM_A459_MK2206_30min_R1 1 DDGSWEVIEGYR 12 0 P49448;P00367 P49448 GLUD2;GLUD1 "Glutamate dehydrogenase 2, mitochondrial;Glutamate dehydrogenase 1, mitochondrial" 1 DDGS(1)WEVIEGYR 103.11 0.012471 0 457.25 518.15 360.04 351.25 432.82 560.81 515.16 504.96 472.17 471.51 TRUE FALSE 418.3584864 484.4183408 335.6014879 378.3033359 415.5798629 592.5625776 480.7946164 500.545188 521.2537612 529.9242185 0.789468516 0.914127575 0.633300906 0.713881953 0.78422508 1.118202484 0.907289381 0.94455994 0.983638307 1 9.049642252 -6.652703801 8.009054255 0.981619412 0.762681429 0.645049528 0.082933034 0.166124683 11.21236791 0.028347978 0.028312575 2.22E-07 6.652703801 -0.218937983 DDGSSMSFYVRPS(ph)PAK ddPTM_A459_MK2206_30min_R1 1 DDGSSMSFYVRPSPAK 16 1 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 DDGSSMSFYVRPS(1)PAK 125.39 0.0057405 4555000 747 613.47 810.98 682.22 595.2 604.45 718.43 578.59 774 498.58 TRUE FALSE 683.4637273 573.5329915 755.9329371 734.7647026 571.4919236 638.6734366 670.5048455 573.5314486 854.4600698 560.3478545 1.219713294 1.023530271 1.349042262 1.311265309 1.01988777 1.139780284 1.196586799 1.023527518 1.524874349 1 9.130178896 -6.23491421 24.98129862 1.153693183 1.220230396 0.048548916 0.16181735 3150.96211 2967562.726 0.046827223 0.060433094 5.82E-07 6.23491421 0.066537213 DDGSWEVIEGYR ddPTM_A459_MK2206_30min_R1 2 DDGSWEVIEGYR 12 0 P49448;P00367 P49448 GLUD2;GLUD1 "Glutamate dehydrogenase 2, mitochondrial;Glutamate dehydrogenase 1, mitochondrial" 0 ; 187.16 0.0015934 5515000 1517.09 1425.44 1507.03 1453.19 1662.86 1344.84 1421.46 1663.79 1343.94 1360.99 FALSE TRUE 1388.053529 1332.643597 1404.737002 1565.114946 1596.624765 1420.983679 1326.636997 1649.243659 1483.647372 1529.599716 0.907461942 0.871236823 0.918369027 1.023218643 1.043818685 0.928990548 0.867309913 1.07821912 0.969957929 1 10.57893845 -5.59436896 5.571663357 0.985249885 0.890454198 0.347068111 0.056340319 0.229986077 12.78207674 0.016202805 0.028681072 2.54E-06 5.59436896 -0.094795687 DDGSWEVIEGYR ddPTM_A459_MK2206_30min_R2 1 DDGSWEVIEGYR 12 0 P49448;P00367 P49448 GLUD2;GLUD1 "Glutamate dehydrogenase 2, mitochondrial;Glutamate dehydrogenase 1, mitochondrial" 0 131.09 0.028743 1959900 5322.2 6162.9 6584.4 5332.1 5968.8 5898.1 5081.9 5318.3 7939.2 6078.2 FALSE TRUE 5729.671724 5856.859348 6803.92061 4896.450373 5734.434921 6122.556328 4414.640426 6013.42007 8629.737265 5879.868832 0.974455704 0.996086735 1.157155169 0.832748232 0.97526579 1.041274305 0.750805937 1.022713302 1.467675132 1 12.52156826 -8.022401402 24.77520165 1.237623221 0.962836612 0.34810948 0.14716518 709.4808556 784657.0036 0.092520261 0.035610795 9.50E-09 8.022401402 -0.27478661 DDGVFVQEVT(ph)QNSPAAR ddPTM_A459_MK2206_30min_R1 1 DDGVFVQEVTQNSPAAR 17 0 Q09666;E9PKR9;E9PLK4;E9PJZ0;E9PJC6;Q09666-2;E9PQE3 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 DDGVFVQEVT(0.998)QNS(0.002)PAAR 104.82 0.003687 4012800 4678.3 3969.7 3844.5 3718.5 5275.6 5461.7 5022.8 4220.6 3637.7 3602.7 TRUE FALSE 4280.386018 3711.271808 3583.546051 4004.899514 5065.461681 5770.936734 4687.738177 4183.699739 4015.851933 4049.029675 1.057138713 0.91658301 0.885038229 0.989101053 1.251031009 1.425264124 1.157743596 1.033259836 0.991806002 1 11.9833605 -6.121075191 5.72137856 1.15894745 0.947616122 0.320254883 0.128653968 0.279069359 11.9390787 0.042131676 0.054957874 7.57E-07 6.121075191 -0.211331328 DDGVFVQEVTQNS(ph)PAAR ddPTM_A459_MK2206_30min_R1 4 DDGVFVQEVTQNSPAAR 17 0 Q09666;E9PKR9;E9PLK4;E9PJZ0;E9PJC6;Q09666-2;E9PQE3 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVTQNS(1)PAAR 346.13 2.32E-155 138974000 15351.1 13908.8 12281.7 11272.5 12858.7 12632.1 14358.2 11757.8 10013.3 9996.1 TRUE FALSE 14045.40833 13003.33459 11448.05242 12140.7099 12346.51075 13347.31859 13400.39068 11655.00279 11054.21837 11234.49233 1.250204096 1.157447458 1.019009323 1.080663865 1.098982525 1.188066019 1.19279005 1.037430304 0.983953528 1 13.45564731 -6.712011109 0.019155593 2.20E-06 2.214902108 0.339197912 0.071116186 984.7773385 7.147432073 390.2701409 434.9287517 1.94E-07 6.712011109 2.214899904 DDGVFVQEVTQNS(ph)PAAR ddPTM_A459_MK2206_30min_R2 4 DDGVFVQEVTQNSPAAR 17 0 Q09666;E9PKR9;E9PLK4;E9PJZ0;E9PJC6;Q09666-2;E9PQE3 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVTQNS(1)PAAR 207.16 5.47E-09 94801200 204013 198606 193604 217958 225391 195615 234120 160872 174572 207430 TRUE FALSE 219632.3921 188743.5148 200058.6607 200150.1342 216541.0168 203059.2659 203379.7628 181898.5228 189755.957 200661.5761 1.094541349 0.940606161 0.996995362 0.997451222 1.079135433 1.011948923 1.013546124 0.90649404 0.945651682 1 17.61440486 -7.720692877 13.8676489 0.944564461 1.016503725 0.314770692 0.045901776 1.82981837 621.810131 0.021316486 0.012292485 1.90E-08 7.720692877 0.071939264 DDHDDFFSTT(ph)PLQHQR ddPTM_A459_MK2206_30min_R2 1 DDHDDFFSTTPLQHQR 16 0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 DDHDDFFS(0.039)T(0.213)T(0.748)PLQHQR 89.344 0.017934 2647100 17037 18694 15980 22096 17975 15452 21250 15944 11557 18629 TRUE FALSE 18341.36582 17765.68314 16512.76522 20290.68612 17269.21118 16040.03669 18459.84947 18027.93554 12562.20697 18021.13726 1.017769609 0.985824751 0.916299842 1.12593816 0.958275326 0.89006795 1.024344314 1.00037724 0.69708181 1 14.13740244 -8.164760986 24.99999745 0.848426281 0.988581989 0.278200968 0.091034345 51.20422415 13233.6829 0.057964609 0.021908561 6.84E-09 8.164760986 0.140155707 DDILNGSHPVSFDK ddPTM_A459_MK2206_30min_R2 1 DDILNGSHPVSFDK 14 0 Q9Y490 Q9Y490 TLN1 Talin-1 0 97.631 0.028298 0 21018 35557 30387 30550 30344 29581 23726 20209 25414 25479 FALSE TRUE 22627.15424 33791.29108 31400.08741 28053.96728 29152.54209 30706.72568 20610.7477 22850.38569 27624.46378 24647.62232 0.918025842 1.370975693 1.273960101 1.138201767 1.182772996 1.245829123 0.836216469 0.927082759 1.120776009 1 14.58916086 -7.248839683 24.95746005 0.964942369 1.197963967 0.407534279 0.127939077 707.228404 1400878.972 0.048320038 0.037160079 5.64E-08 7.248839683 0.233021597 DDISEIQSLAS(ph)DHSGR ddPTM_A459_MK2206_30min_R2 2 DDISEIQSLASDHSGR 16 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 DDISEIQSLAS(0.626)DHS(0.374)GR;DDISEIQSLAS(0.653)DHS(0.347)GR 150.23 0.00015627 3956500 28968 28518 28900 39078 31836 35645 40591 28246 32555 28542 TRUE FALSE 31185.81235 27101.83759 29863.51158 35885.2024 30585.95868 37001.49545 35261.35294 31937.84918 35386.57505 27610.67688 1.129483804 0.981570923 1.081592882 1.299685718 1.10775838 1.340115478 1.277091217 1.156720979 1.281626496 1 14.75293864 -5.632267942 6.453769062 1.219186205 1.050034009 0.295489049 0.101905426 0.219575738 11.6209164 0.026030721 0.045434964 2.33E-06 5.632267942 -0.169152197 DDISEIQSLASDHS(ph)GR ddPTM_A459_MK2206_30min_R1 1 DDISEIQSLASDHSGR 16 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 DDISEIQSLAS(0.007)DHS(0.993)GR 139.38 0.00033155 0 1012 803.9 981.52 445.27 1007.4 1102.2 1180.3 953.65 922.69 1070.3 TRUE FALSE 925.9240858 751.5659639 914.8971571 479.5647726 967.2731248 1164.605611 1101.564341 945.3123386 1018.606927 1202.896844 0.769745211 0.624796688 0.760578234 0.398674895 0.804119763 0.968167484 0.915759606 0.785863179 0.846794912 1 10.23229721 -6.511574111 24.64956933 0.890203669 0.640597154 0.561289164 0.110185602 352.2087548 767987.3823 0.034573963 0.036973586 3.08E-07 6.511574111 -0.249606516 DDKEEEEDGTGS(ph)PQLNNR ddPTM_A459_MK2206_30min_R2 2 DDKEEEEDGTGSPQLNNR 18 1 P49407-2;P49407 P49407-2 ARRB1 Beta-arrestin-1 1 DDKEEEEDGT(0.052)GS(0.948)PQLNNR;DDKEEEEDGT(0.007)GS(0.993)PQLNNR 119.27 0.00053837 20703500 103452 94708 94063 84206 82685 55794 105195 88054 56688 100913 TRUE FALSE 111372.3647 90004.93844 97199.01347 77326.10044 79438.37144 57917.27977 91382.77014 99562.96013 61618.61977 97620.21707 1.140873971 0.921990763 0.995685283 0.79211154 0.813749178 0.593291856 0.936104968 1.019901032 0.631207568 1 16.57489234 -4.602726395 0.973584137 0.82649949 1.367653843 0.303198543 0.138762023 3.41448753 2.052994962 0.046286354 2.110272326 2.50E-05 4.602726395 0.541154354 DDNEQLITQYER ddPTM_A459_MK2206_30min_R2 1 DDNEQLITQYER 12 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 0 134.75 0.021538 1104400 4614.1 5990.1 5579.3 7569.1 5068.3 6939.3 5776.7 4659.5 6361.8 6997.7 FALSE TRUE 4967.359044 5692.640344 5765.311077 6950.680318 4869.293076 7203.379924 5018.212351 5268.512648 6915.137864 6769.365622 0.733799786 0.84094148 0.851676715 1.026784592 0.719313056 1.064114472 0.741312057 0.7782875 1.021534107 1 12.72480493 -13.2712916 0.019358811 2.033294983 2.98E-06 0.152060059 0.119683483 6377.677989 11.51428674 764.2488871 475.536371 5.35E-14 13.2712916 -2.033292004 DDNHS(ph)LTFFPESTEQK ddPTM_A459_MK2206_30min_R2 2 DDNHSLTFFPESTEQK 16 0 E9PG22;Q8IW35;Q8IW35-2 E9PG22 CEP97 Centrosomal protein of 97 kDa 1 DDNHS(0.95)LT(0.05)FFPESTEQK;DDNHS(0.999)LT(0.001)FFPESTEQK 98.269 0.0047473 9720900 82214 39729 54905 50270 50959 37520 53945 41085 40689 66673 TRUE FALSE 88508.36705 37756.11563 56735.5053 46162.78019 48958.09361 38947.84989 46861.9567 46454.95057 44228.05567 64497.46547 1.372276669 0.585389137 0.879654803 0.715730143 0.759070039 0.603866363 0.726570515 0.720260094 0.685733235 1 15.97695485 -4.753318133 24.99999079 0.732311712 1.372277841 0.725879911 0.116099224 143.6055628 442032.6762 0.026467947 0.288322328 1.76E-05 4.753318133 0.639966129 DDPDGKQEAKPQQAAGMLS(ph)PK ddPTM_A459_MK2206_30min_R1 2 DDPDGKQEAKPQQAAGMLSPK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK 63.906 0.0056684 55865000 9648.2 13156.7 13620.6 11949.2 6801.1 5589.2 7429.2 9554.1 10581.1 9103.5 TRUE FALSE 8827.569925 12300.19644 12696.07162 12869.52945 6530.197785 5905.655674 6933.611623 9470.569511 11681.04321 10231.31031 0.86279955 1.202211258 1.240903779 1.257857407 0.638256253 0.577214012 0.677685596 0.925645809 1.141695722 1 13.3207033 -6.255461478 24.96667059 0.803101879 1.152459365 0.387937311 0.191747126 502.6711608 2099401.636 0.061559971 0.077368176 5.55E-07 6.255461478 0.349357486 DDPDGKQEAKPQQAAGMLS(ph)PK ddPTM_A459_MK2206_30min_R2 1 DDPDGKQEAKPQQAAGMLSPK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 DDPDGKQEAKPQQAAGMLS(1)PK 81.525 0.0019859 11394000 39942 39521 40794 27294 40155 18239 46185 26204 31299 42720 TRUE FALSE 42999.99023 37558.44461 42154.0516 25063.99289 38578.31294 18933.09793 40120.85402 29628.95277 34021.33044 41326.0499 1.040505694 0.908832194 1.02003583 0.606493796 0.933510777 0.458139551 0.970836896 0.716955839 0.823241769 1 15.33476385 -5.735559882 24.99730234 0.775290738 0.981695451 0.247639557 0.160867478 295.5575252 285480.1055 0.040383484 0.069915815 1.84E-06 5.735559882 0.206404713 DDS(ph)LDLSPQGR ddPTM_A459_MK2206_30min_R2 2 DDSLDLSPQGR 11 0 Q14669;Q14669-2;Q14669-3;Q14669-4 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 DDS(0.974)LDLS(0.026)PQGR;DDS(1)LDLSPQGR 138.89 0.0012132 11610700 45436 49223 41736 41905 49250 48233 51987 37719 42321 47670 TRUE FALSE 48914.61509 46778.6574 43127.45741 38481.22745 47316.19754 50068.54061 45161.04445 42649.00281 46002.00408 46114.5318 1.060720193 1.014401655 0.935224879 0.834470739 1.026058288 1.085743228 0.979323495 0.924849524 0.997559821 1 15.49293383 -4.983861479 4.246845784 0.971405943 1.055138666 0.160720494 0.063202912 0.392264114 16.87312777 0.017580607 0.07301647 1.04E-05 4.983861479 0.083732722 DDS(ph)PVSHR ddPTM_A459_MK2206_30min_R2 2 DDSPVSHR 8 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 DDS(1)PVSHR;DDS(1)PVSHR 82.417 0.027364 9267000 87812 25967 47180 36242 52626 25927 60617 166117 74476 81199 TRUE FALSE 94534.95424 24677.51654 48752.95765 33280.91267 50559.63882 26913.67015 52657.91509 187829.0623 80953.78786 78549.48328 1.203508289 0.314165231 0.620665542 0.423693591 0.643666091 0.342633319 0.670378886 2.391219578 1.030608789 1 16.26131416 -7.582140427 15.70442767 1.533002586 0.569175403 0.465504191 0.426746167 1.936413859 511.994606 0.184807046 0.106691211 2.62E-08 7.582140427 -0.963827183 DDS(ph)QNAIDHK ddPTM_A459_MK2206_30min_R2 1 DDSQNAIDHK 10 0 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 DDS(1)QNAIDHK 77.42 0.040458 0 101620 64994 86151 58372 57664 41148 69202 56811 37246 83839 TRUE FALSE 109400.1053 61766.49247 89023.23134 53602.82088 55399.82162 42713.91597 60115.69427 64236.39276 40485.58975 81103.3403 1.348897652 0.761577664 1.097651848 0.660920015 0.683076941 0.526660379 0.741223408 0.792031407 0.499185232 1 16.30747371 -5.764843111 24.98768422 0.68551181 1.038595951 0.445401676 0.187197495 76.80492471 563851.4292 0.04909 0.0762572 1.72E-06 5.764843111 0.353084141 DDSHSAEDS(ph)EDEKEDHK ddPTM_A459_MK2206_30min_R1 2 DDSHSAEDSEDEKEDHK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 DDS(0.001)HS(0.001)AEDS(0.998)EDEKEDHK;DDSHS(0.001)AEDS(0.999)EDEKEDHK 70.615 0.013522 38369000 11197.1 16113.4 13876 10658 5332.8 5923.6 9529.7 7905.1 4474.8 15416.8 TRUE FALSE 10244.72785 15064.41473 12934.13578 11478.88101 5120.383284 6258.989113 8893.991101 7835.986544 4939.971473 17326.74957 0.591266573 0.869431088 0.74648368 0.662494772 0.295518976 0.361232734 0.513309843 0.452247925 0.285106647 1 14.08071342 -6.068642631 5.716284035 0.452899964 0.742992877 0.240414369 0.200887305 0.256846799 15.81708478 0.055921247 0.073630866 8.54E-07 6.068642631 0.290092913 DDSHSAEDS(ph)EDEKEDHK ddPTM_A459_MK2206_30min_R2 2 DDSHSAEDSEDEKEDHK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 DDSHS(0.001)AEDS(0.999)EDEKEDHK;DDS(0.003)HS(0.024)AEDS(0.974)EDEKEDHK 55.815 0.033011 36354000 129874 84830 104810 78553 70880 45491 117397 91179 62130 125685 TRUE FALSE 139817.2533 80617.46555 108304.3131 72134.96862 68096.89506 47222.19188 101982.6329 103096.4084 67533.95509 121583.9087 1.149965113 0.663060321 0.890778346 0.593293713 0.560081476 0.388391789 0.838783964 0.847944514 0.555451423 1 16.89159278 -2.741154778 1.477748386 0.683183265 199.9999995 0.338810006 0.181193503 687.815876 4.61394046 0.051315704 461787.1932 0.001814869 2.741154778 199.3168162 DDSLDLS(ph)PQGR ddPTM_A459_MK2206_30min_R1 2 DDSLDLSPQGR 11 0 Q14669;Q14669-2;Q14669-3;Q14669-4 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 DDS(0.001)LDLS(0.999)PQGR;DDS(0.227)LDLS(0.773)PQGR 130.69 0.0023466 18904300 5587.6 4458.7 4334 4191.5 5030.5 5252.4 4154.2 4373.5 3820.9 3235.5 TRUE FALSE 5112.345278 4168.43782 4039.820155 4514.330056 4830.124533 5549.786349 3877.080898 4335.262951 4218.096228 3636.338167 1.405904799 1.146328429 1.110958324 1.241449461 1.32829355 1.526201936 1.066204715 1.192205662 1.159984587 1 11.82827066 -8.418325017 0.977647593 1.009684668 1.264730585 0.2907265 0.12888501 0.776624726 1.62696234 0.129215935 0.044041956 3.82E-09 8.418325017 0.255045917 DDSLDLS(ph)PQGR ddPTM_A459_MK2206_30min_R2 2 DDSLDLSPQGR 11 0 Q14669;Q14669-2;Q14669-3;Q14669-4 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 DDS(0.002)LDLS(0.998)PQGR;DDS(0.083)LDLS(0.917)PQGR 115.37 0.0061963 54167000 207190 234270 202827 244890 263670 231240 278200 187526 215460 264160 TRUE FALSE 223052.6257 222636.4925 209589.1509 224881.7036 253316.991 240040.0002 241672.0058 212036.2921 234200.3213 255540.4808 0.872866111 0.871237667 0.820179841 0.880023795 0.991298874 0.939342367 0.945728853 0.829756176 0.916490102 1 17.96319232 -6.012716535 23.92753278 0.929727242 0.855357669 0.399898353 0.045873156 394.8202318 742901.0366 0.01387263 0.018875535 9.71E-07 6.012716535 -0.074369572 DDTIYEDEDVKEAIR ddPTM_A459_MK2206_30min_R1 1 DDTIYEDEDVKEAIR 15 1 E5RHG9;B7Z2R2;P14927;P14927-2 E5RHG9 UQCRB Cytochrome b-c1 complex subunit 7 0 164.53 0.00026446 3045700 1373.9 1458.4 977.49 1605.6 1334.9 1322.9 1670.7 1510.2 1159.3 1482.6 FALSE TRUE 1257.04259 1363.457895 911.1407022 1729.26359 1281.728106 1397.801455 1559.250651 1496.996481 1279.813384 1666.275681 0.754402531 0.818266695 0.546812699 1.037801613 0.769217316 0.838877666 0.935769914 0.898408647 0.768068212 1 10.7024114 -1.522878757 0.081033548 1.110847788 0.102412421 0.226118639 0.118400551 287.4616675 1.702437189 3.15250759 32.42892315 0.029999999 1.522878757 -1.008435367 DDVAPES(ph)GDTTVK ddPTM_A459_MK2206_30min_R2 1 DDVAPESGDTTVK 13 0 O76021;J3QSV6;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 DDVAPES(0.957)GDT(0.019)T(0.024)VK 101.43 0.012442 0 24813 22167 20223 27733 19302 14325 24466 22208 15783 22021 TRUE FALSE 26712.70236 21066.21901 20897.22473 25467.12519 18544.1065 14870.14791 21253.58481 25110.66185 17155.77681 21302.45657 1.253972858 0.988910314 0.980977225 1.1955018 0.87051493 0.698048503 0.997705816 1.178768362 0.805342649 1 14.37873219 -1.52288505 0.908724896 0.956452925 149.0433359 0.259179016 0.144258733 1423.065819 3.021462798 0.050079409 437224.9132 0.029999565 1.52288505 148.086883 DDYVHEFCR ddPTM_A459_MK2206_30min_R1 2 DDYVHEFCR 9 0 Q13564-3;Q13564-2;Q13564;Q13564-4 Q13564-3 NAE1 NEDD8-activating enzyme E1 regulatory subunit 0 ; 122.94 0.0081285 9411100 9559.8 10204.6 10730 8609.9 9734.6 8533.2 9487.7 8967.3 9391.4 8484.6 FALSE TRUE 8746.688809 9540.278685 10001.6775 9273.03599 9346.850269 9016.34241 8854.792844 8888.899842 10367.66964 9535.736303 0.917253637 1.000476354 1.048862634 0.972450967 0.980191772 0.945531852 0.928590364 0.932167119 1.087243744 1 13.21912863 -8.258024643 24.99716725 1.043621871 0.968422602 0.355587701 0.041835198 336.4118039 2462708.356 0.032636813 0.011236672 5.52E-09 8.258024643 -0.07519927 DDYVHEFCR ddPTM_A459_MK2206_30min_R2 2 DDYVHEFCR 9 0 Q13564-3;Q13564-2;Q13564;Q13564-4 Q13564-3 NAE1 NEDD8-activating enzyme E1 regulatory subunit 0 ; 136.99 0.003642 11968900 84528 108513 98025 106912 105446 94884 109931 99204 85905 105910 FALSE TRUE 90999.52867 103124.4022 101293.1046 98176.94761 101305.6602 98494.87711 95496.92765 112170.3034 93376.86162 102454.1654 0.888197452 1.006541821 0.98866751 0.958252378 0.988790059 0.961355517 0.932094145 1.094833997 0.911401321 1 16.64461911 -4.752528895 24.9892722 0.982806371 0.88819727 0.264589542 0.047130447 461.8567829 1295172.024 0.010980389 0.129910602 1.77E-05 4.752528895 -0.0946091 DEALQNIS(ph)ADDLPDSASQAAHPQDSAFSYR ddPTM_A459_MK2206_30min_R1 1 DEALQNISADDLPDSASQAAHPQDSAFSYR 30 0 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 DEALQNIS(0.984)ADDLPDS(0.015)AS(0.001)QAAHPQDSAFSYR 99.641 3.51E-08 6703300 960.28 827.24 864.39 740.45 1071.5 1121.1 1005.1 954.25 817.01 807.58 TRUE FALSE 878.6031434 773.3865256 805.7176151 797.4795873 1028.819886 1184.575713 938.0516129 945.9070929 901.9411132 907.6291073 0.968020016 0.852095332 0.887716809 0.878640384 1.133524562 1.305131913 1.033518654 1.042173598 0.993733129 1 9.825959066 -6.257257332 24.84934132 1.095253489 0.892802116 0.515591654 0.088917433 277.011482 1645976.156 0.02848116 0.035475257 5.53E-07 6.257257332 -0.202451373 DEALQNIS(ph)ADDLPDSASQAAHPQDSAFSYR ddPTM_A459_MK2206_30min_R2 1 DEALQNISADDLPDSASQAAHPQDSAFSYR 30 0 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 DEALQNIS(0.988)ADDLPDS(0.009)AS(0.003)QAAHPQDSAFSYR 86.47 1.41E-06 2948300 6638.6 9544.4 3868.1 5361 6662.1 8687.6 8787.4 4258.8 7870.9 4185.7 TRUE FALSE 7146.85632 9070.438975 3997.060523 4922.989151 6400.51248 9018.212706 7633.603824 4815.439783 8555.496655 4049.120952 1.765038981 2.240100773 0.987142783 1.215816769 1.580716545 2.227202599 1.885249642 1.189255604 2.112926918 1 11.98339302 -6.545585174 24.98719454 1.729240379 1.540504337 0.012851393 0.468441855 1029.387104 1132776.907 0.158296793 0.158305442 2.85E-07 6.545585174 -0.188736042 DEALQNISADDLPDS(ph)ASQAAHPQDSAFSYR ddPTM_A459_MK2206_30min_R1 1 DEALQNISADDLPDSASQAAHPQDSAFSYR 30 0 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 DEALQNISADDLPDS(0.586)AS(0.414)QAAHPQDSAFSYR 118.67 7.05E-16 6133600 709.23 477.5 616 563.64 919.16 478.67 413.96 649.25 419.19 253.42 TRUE FALSE 648.9062642 446.4146632 574.1876363 607.0516505 882.5479108 505.7718817 386.3454837 643.5736757 462.7663006 284.8155828 2.278338347 1.567381457 2.015997968 2.131384963 3.098664413 1.775787254 1.356475934 2.259615395 1.624792773 1 8.153884271 -8.927591876 0.616496443 0.977243556 2.110269099 0.355313102 0.445771028 1.835505082 1.302339714 0.564828653 0.198140857 1.18E-09 8.927591876 1.133025543 DEALQNISADDLPDSAS(ph)QAAHPQDSAFSYR ddPTM_A459_MK2206_30min_R1 1 DEALQNISADDLPDSASQAAHPQDSAFSYR 30 0 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 DEALQNISADDLPDS(0.33)AS(0.67)QAAHPQDSAFSYR 137.46 3.32E-18 7527300 596.82 527 751.92 538.22 1108.4 1029.3 723.84 705.76 638.49 479.35 TRUE FALSE 546.057325 492.6922042 700.8817654 579.6737977 1064.250081 1087.578076 675.5539543 699.5896147 704.8633204 538.7354969 1.013590766 0.914534511 1.300975654 1.075989611 1.975459362 2.018760751 1.25396221 1.298577166 1.30836621 1 9.073433316 -6.119437841 20.48323868 1.508595199 1.080558468 0.280414322 0.310903008 6.489019205 1087.374121 0.097975992 0.126486866 7.60E-07 6.119437841 -0.428036732 DEAQNEGPATESEAPLKEDGLLPKPLS(ph)SGGEEEEKPR ddPTM_A459_MK2206_30min_R1 1 DEAQNEGPATESEAPLKEDGLLPKPLSSGGEEEEKPR 37 3 Q8N163-2;Q8N163;G3V119;H0YB24 Q8N163-2 CCAR2 Cell cycle and apoptosis regulator protein 2 1 DEAQNEGPAT(0.001)ES(0.001)EAPLKEDGLLPKPLS(0.922)S(0.075)GGEEEEKPR 52.872 0.0016285 7755700 625.24 796.86 943.19 575 411.02 511.54 851.76 619.89 672.39 889.7 TRUE FALSE 572.0600547 744.9842692 879.1688907 619.2865996 394.6482031 540.5029527 794.9406445 614.4703671 742.2873467 999.9227529 0.572104248 0.745041821 0.879236809 0.619334441 0.394678691 0.540544708 0.795002056 0.614517837 0.742344691 1 9.965672836 -8.89273536 1.301576531 1.000326483 0.645194686 0.404043205 0.129832411 1.565825973 4.074556714 0.136841146 0.040887748 1.28E-09 8.89273536 -0.355131797 DEAQNEGPATESEAPLKEDGLLPKPLS(ph)SGGEEEEKPR ddPTM_A459_MK2206_30min_R2 1 DEAQNEGPATESEAPLKEDGLLPKPLSSGGEEEEKPR 37 3 Q8N163-2;Q8N163;G3V119;H0YB24 Q8N163-2 CCAR2 Cell cycle and apoptosis regulator protein 2 1 DEAQNEGPATESEAPLKEDGLLPKPLS(0.5)S(0.5)GGEEEEKPR 44.287 0.010957 8529800 11768 13698 16043 14084 9777.8 6525.2 14198 12666 8926.1 14135 TRUE FALSE 12668.96713 13017.77724 16577.86561 12933.29215 9393.874442 6773.521058 12333.78555 14321.48969 9702.476043 13673.77611 0.926515619 0.952025039 1.212383871 0.945846418 0.686999287 0.495365801 0.902002888 1.047369035 0.709568152 1 13.73912409 -6.009801801 23.34393228 0.800068095 1.031919079 0.272761447 0.165951799 269.0981825 640890.7012 0.050822806 0.070629238 9.78E-07 6.009801801 0.231850984 DEDDDEEEEEEGGSWGR ddPTM_A459_MK2206_30min_R2 1 DEDDDEEEEEEGGSWGR 17 0 Q5VYD6;O00165-4;O00165-6;O00165;O00165-2;O00165-3 Q5VYD6 HAX1 HCLS1-associated protein X-1 0 350.9 0 0 9199.1 8356.2 10800 10484 9255.6 6713 8229.8 7282.2 7638.6 9296.8 FALSE TRUE 9903.390169 7941.243259 11160.06661 9627.423663 8892.178638 6968.467919 7149.217374 8234.008544 8302.991621 8993.446177 1.101178566 0.883003367 1.240911036 1.070493276 0.988739852 0.774838453 0.794936361 0.915556549 0.923226921 1 13.13465833 -6.544176359 5.160958005 0.870846913 1.068265064 0.444735694 0.100913882 0.168759397 12.60412296 0.033801811 0.034814711 2.86E-07 6.544176359 0.19741815 DEDDEDGDGDGDGATGK ddPTM_A459_MK2206_30min_R2 1 DEDDEDGDGDGDGATGK 17 0 P50579-3;P50579;G3V1U3;F8VQZ7;F8VY03 P50579-3 METAP2 Methionine aminopeptidase 2 0 295.29 3.23E-75 5994300 45853 29498 31917 26255 22969 18532 35054 22707 17065 40632 FALSE TRUE 49363.54093 28033.17221 32981.09685 24109.88251 22067.12165 19237.24825 30451.36769 25674.88286 18549.28285 39306.18117 1.255872218 0.713200097 0.839081688 0.613386541 0.561416067 0.489420434 0.774722112 0.653202171 0.471917706 1 15.26246858 -2.24164961 1.103389512 0.64276572 199.9999992 0.549115198 0.15538671 364.500459 1.810979813 0.045092902 182267.2422 0.005732584 2.24164961 199.3572334 DEDEGIPS(ph)ENEEEK ddPTM_A459_MK2206_30min_R2 1 DEDEGIPSENEEEK 14 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 DEDEGIPS(1)ENEEEK 172.85 1.20E-09 0 43185 20386 30062 20830 21118 12729 28370 22295 14640 29551 TRUE FALSE 46491.2768 19373.66088 31064.25208 19128.12237 20288.80121 13213.41101 24644.98492 25209.03305 15913.36074 28586.75329 1.626322385 0.677714628 1.086665973 0.669125387 0.709727369 0.462221466 0.862112065 0.881843167 0.556669048 1 14.80305916 -4.758032056 24.99892938 0.762185366 1.626323592 0.663337057 0.183550956 57.84991695 424367.4769 0.044983846 0.318288356 1.75E-05 4.758032056 0.864138226 DEDEGIPS(ph)ENEEEKK ddPTM_A459_MK2206_30min_R2 2 DEDEGIPSENEEEKK 15 1 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 DEDEGIPS(1)ENEEEKK;DEDEGIPS(1)ENEEEKK 109.99 0.0064835 23721800 239641 132230 175374 125514 109489 70077 178889 125149 80000 214336 TRUE FALSE 257988.0992 125663.6505 181220.8816 115259.1047 105189.9117 72743.82934 155400.6594 141506.404 86958.25539 207342.2339 1.244262177 0.60606876 0.874018179 0.555888217 0.507325062 0.350839421 0.749488691 0.682477474 0.419394803 1 17.66165449 -2.564100514 1.27810295 0.606977116 199.9999986 0.455208927 0.193406984 407.6069418 2.779714727 0.054440919 236060.7422 0.002728346 2.564100514 199.3930215 DEDMLYS(ph)PELAQR ddPTM_A459_MK2206_30min_R1 2 DEDMLYSPELAQR 13 0 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 DEDMLYS(1)PELAQR;DEDMLYS(1)PELAQR 236.42 1.38E-17 79216000 12383.4 11111.2 10815 9120.7 10998.3 8003.7 11087.8 10350.9 9729.9 10322.4 TRUE FALSE 11330.1268 10387.85886 10080.90793 9823.177894 10560.21442 8456.862577 10348.15309 10260.40317 10741.35792 11601.21684 0.97663262 0.895411145 0.868952634 0.846736858 0.910267825 0.728963409 0.891988593 0.884424739 0.925882006 1 13.50198852 -8.56103645 1.710839042 0.999391856 0.870381968 0.302630053 0.058771183 0.518946756 3.389986841 0.057084785 0.016359017 2.75E-09 8.56103645 -0.129009888 DEDMLYS(ph)PELAQR ddPTM_A459_MK2206_30min_R2 5 DEDMLYSPELAQR 13 0 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 DEDMLYS(1)PELAQR;DEDMLYS(1)PELAQR;DEDMLYS(1)PELAQR;DEDMLYS(1)PELAQR;DEDMLYS(1)PELAQR 227.63 6.23E-13 38703100 103169 100223 92999 102745 98014 99839 113066 76715.9 77212 94992.6 TRUE FALSE 111067.698 95246.07156 96099.54024 94350.40484 94165.47788 103638.4431 98220.29838 86742.93154 83927.76019 91892.99924 1.208663325 1.036488877 1.045776512 1.026742033 1.024729617 1.127816525 1.068855073 0.943955821 0.913320502 1 16.48766734 -7.75704045 9.549369288 0.946343331 1.072320836 0.502684956 0.056556077 0.093223138 112.3113495 0.028368804 0.015223831 1.75E-08 7.75704045 0.125977505 DEDNDEDEER ddPTM_A459_MK2206_30min_R2 1 DEDNDEDEER 10 0 Q9NRF9 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 0 123.11 0.042364 0 6307.1 2435.1 4097.4 3058.3 3596.5 763.93 3466.4 4017.4 1981.7 5636.2 FALSE TRUE 6789.976425 2314.176475 4234.005271 2808.427107 3455.283339 793.0018915 3011.257516 4542.487974 2154.064684 5452.291256 1.245343674 0.424441096 0.776555227 0.515091175 0.633730514 0.145443788 0.552292124 0.833133771 0.395075131 1 12.41264692 -10.55816227 19.64214152 1 0.601294565 0.143954843 0.281381034 0 0 0.262690422 0.063711786 2.77E-11 10.55816227 -0.398705435 DEEDTS(ph)FESLSK ddPTM_A459_MK2206_30min_R2 1 DEEDTSFESLSK 12 0 H7C3L4;E7EQA9;Q92844 H7C3L4 TANK TRAF family member-associated NF-kappa-B activator 1 DEEDT(0.002)S(0.901)FES(0.096)LSK 185.2 0.00010451 5280100 45330 39189 40781 45406 42801 27872 45525 35212 31273 46038 TRUE FALSE 48800.49965 37242.93125 42140.61819 41696.18455 41120.41768 28932.68849 39547.51281 39814.3293 33993.06901 44535.78383 1.095759308 0.836247351 0.9462193 0.936240052 0.923311866 0.649650371 0.88799409 0.893985148 0.763275418 1 15.44267737 -4.756710742 24.96443834 0.867130357 1.09575966 0.330527933 0.095935163 171.1659621 903546.7166 0.023929658 0.189306052 1.75E-05 4.756710742 0.228629304 DEEDTSFES(ph)LSK ddPTM_A459_MK2206_30min_R1 1 DEEDTSFESLSK 12 0 H7C3L4;E7EQA9;Q92844 H7C3L4 TANK TRAF family member-associated NF-kappa-B activator 1 DEEDT(0.032)S(0.002)FES(0.933)LS(0.032)K 136.99 0.0031917 0 940.02 1020.7 1086.2 999.01 776.94 581.56 970.52 807.13 776.54 1010.4 TRUE FALSE 860.0663628 954.2522445 1012.47177 1075.953923 745.9928346 614.4874246 905.7783816 800.0733475 857.2641119 1135.57598 0.75738337 0.840324436 0.891593155 0.947496198 0.656929037 0.541124007 0.797637849 0.704552898 0.754915679 1 10.14920852 -4.396913937 12.01664059 0.78061078 0.000471684 0 0.130862995 2271951.589 3328134.093 0.034454452 46853446.29 4.01E-05 4.396913937 -0.780139096 DEEPSGWEEPS(ph)PQSISR ddPTM_A459_MK2206_30min_R1 2 DEEPSGWEEPSPQSISR 17 0 Q9UPQ9;Q9UPQ9-1;H0Y720 Q9UPQ9 TNRC6B Trinucleotide repeat-containing gene 6B protein 1 DEEPSGWEEPS(0.97)PQS(0.03)ISR;DEEPSGWEEPS(0.998)PQS(0.002)ISR 273.77 6.00E-52 6845700 2675.45 2920.46 2676.24 2163.96 2327.77 2488.29 2618.18 2469.02 2347.97 3334.5 TRUE FALSE 2447.888928 2730.337523 2494.584285 2330.628574 2235.049992 2629.174829 2443.525989 2447.433618 2592.049884 3747.603034 0.653187893 0.728555692 0.665647952 0.621898465 0.596394541 0.70156172 0.652023698 0.653066399 0.691655402 1 11.87175243 -8.908360001 2.522870251 0.999996081 0.659572151 0.894890156 0.0348379 1.220352385 7.646708161 0.035663371 0.009604404 1.23E-09 8.908360001 -0.34042393 DEEPSGWEEPS(ph)PQSISR ddPTM_A459_MK2206_30min_R2 3 DEEPSGWEEPSPQSISR 17 0 Q9UPQ9;Q9UPQ9-1;H0Y720 Q9UPQ9 TNRC6B Trinucleotide repeat-containing gene 6B protein 1 DEEPSGWEEPS(1)PQSISR;DEEPSGWEEPS(1)PQSISR;DEEPSGWEEPS(0.91)PQS(0.09)ISR 244.27 4.61E-23 14495000 50624.5 42420.9 42416.6 39143.7 36659.3 34286.7 49127 32875.8 32746.7 49137.2 TRUE FALSE 54500.35064 40314.33979 43830.74827 35945.5345 35219.87168 35591.50439 42676.56589 37172.77994 35594.94877 47533.85719 1.146558556 0.848118419 0.922095341 0.756209082 0.740942851 0.748761125 0.897814072 0.782027425 0.748833587 1 15.53666786 DEEPSGWEEPSPQS(ph)ISR ddPTM_A459_MK2206_30min_R2 1 DEEPSGWEEPSPQSISR 17 0 Q9UPQ9;Q9UPQ9-1;H0Y720 Q9UPQ9 TNRC6B Trinucleotide repeat-containing gene 6B protein 1 DEEPSGWEEPS(0.312)PQS(0.68)IS(0.008)R 169.06 1.07E-06 3134400 5276.5 4932.3 4254.9 5701.2 5225.4 5437.3 6913.3 4752.7 4008.8 7258.1 TRUE FALSE 5680.472897 4687.369154 4396.756242 5235.393723 5020.22454 5644.220262 6005.575406 5373.894208 4357.478178 7021.268791 0.809037948 0.667595743 0.626205373 0.745647814 0.715002472 0.803874688 0.855340478 0.765373662 0.620611218 1 12.77751604 -6.730569659 5.895462703 0.79741684 0.706548215 0.187725149 0.098374153 0.337994014 33.12264876 0.032864242 0.031981676 1.86E-07 6.730569659 -0.090868625 DEEVHAGLGELLR ddPTM_A459_MK2206_30min_R1 2 DEEVHAGLGELLR 13 0 E9PQ34;E9PJH8;E9PIG2;E9PRS3;E9PNX1;E9PK86;E9PMI5;E9PR70;E9PPV6;P50454 E9PQ34 SERPINH1 Serpin H1 0 ; 98.942 0.017065 3639300 8208.9 8002.9 7462.4 5347.5 6465.7 6520.8 8912.9 7610.2 9083 10354.8 FALSE TRUE 7510.689948 7481.909755 6955.873079 5759.365377 6208.157478 6890.002061 8318.336704 7543.664824 10027.21035 11637.6308 0.645379638 0.642906609 0.597705255 0.49489157 0.533455442 0.59204508 0.714779223 0.648213107 0.861619562 1 13.50650976 -8.357271208 1.015830348 1.003126198 0.584686165 0.858370966 0.054530202 0.192385956 0.425553484 0.056401637 0.01909665 4.39E-09 8.357271208 -0.418440032 DEEVHAGLGELLR ddPTM_A459_MK2206_30min_R2 1 DEEVHAGLGELLR 13 0 E9PQ34;E9PJH8;E9PIG2;E9PRS3;E9PNX1;E9PK86;E9PMI5;E9PR70;E9PPV6;P50454 E9PQ34 SERPINH1 Serpin H1 0 112.02 0.0070977 1414300 18584 15100 17430 14873 15665 17068 17479 14643 13020 15103 FALSE TRUE 20006.80533 14350.15596 18011.1075 13657.82832 15049.91339 17717.5347 15183.9863 16556.89038 14152.45607 14610.19035 1.369373352 0.982201848 1.23277706 0.934815221 1.03009701 1.212683359 1.039273681 1.133242619 0.968670204 1 13.83468735 -4.751225482 24.99904508 1.068255375 1.36937397 0.476596154 0.097074037 374.1856688 915777.2094 0.022902968 0.309525664 1.77E-05 4.751225482 0.301118595 DEFEGLFK ddPTM_A459_MK2206_30min_R2 1 DEFEGLFK 8 0 P22314;P22314-2;Q5JRR6 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 0 133.6 0.041826 3703300 10700 14003 12530 15521 14478 11256 12660 11342 11747 13758 FALSE TRUE 11519.20023 13307.63138 12947.74395 14252.88465 13909.52097 11684.35497 10997.72679 12824.43834 12768.73283 13309.07759 0.865514545 0.999891337 0.972850587 1.070914536 1.045115327 0.877923725 0.826332758 0.963585813 0.959400285 1 13.70012297 -6.766499081 24.99972764 0.916977896 0.994806415 0.181854926 0.067936843 201.1009345 993622.5126 0.024667214 0.022420018 1.71E-07 6.766499081 0.077828518 DEGLCS(ph)ANVTR ddPTM_A459_MK2206_30min_R1 3 DEGLCSANVTR 11 0 A0A3B3IS67;P48307-2;P48307 A0A3B3IS67 TFPI2 Tissue factor pathway inhibitor 2 1 DEGLCS(1)ANVTR;DEGLCS(1)ANVTR;DEGLCS(1)ANVTR 118.73 0.0052246 8202100 8286.5 9989.7 8908.4 9025.9 9338.7 8164.7 8349.2 8222.2 7153.7 7433.3 TRUE FALSE 7581.689661 9339.368714 8303.722628 9721.076382 8966.719804 8626.978258 7792.240102 8150.314172 7897.352715 8354.193323 0.907531029 1.117925855 0.993958639 1.163616403 1.073319644 1.032652457 0.932733994 0.975595591 0.945316012 1 13.02828481 -7.107178006 4.655009898 0.961910589 1.057678952 0.279049592 0.06673936 0.280446046 9.70713363 0.025242406 0.019493227 7.81E-08 7.107178006 0.095768364 DEGLCS(ph)ANVTR ddPTM_A459_MK2206_30min_R2 2 DEGLCSANVTR 11 0 A0A3B3IS67;P48307-2;P48307 A0A3B3IS67 TFPI2 Tissue factor pathway inhibitor 2 1 DEGLCS(1)ANVTR;DEGLCS(1)ANVTR 109.95 0.0090995 13659300 62873 59012 62362 56093 56564 51959 69260 51532 45807 56161 TRUE FALSE 67686.60522 56081.54989 64441.11795 51510.02247 54343.01315 53936.33615 60166.0788 58267.40934 49791.21006 54328.47117 1.245877231 1.03226814 1.186138991 0.948122069 1.000267668 0.992782145 1.107450247 1.072502283 0.916484653 1 15.72942083 -1.522878772 0.757793206 1.017883204 40.42562322 0.449386926 0.073260616 384.1923032 1.604978728 0.026947355 25870.47418 0.029999998 1.522878772 39.40774002 DEGNYLDDALVR ddPTM_A459_MK2206_30min_R1 1 DEGNYLDDALVR 12 0 P09525;Q6P452;P09525-2 P09525 ANXA4 Annexin A4;Annexin 0 185.25 0.0014476 5721200 1467.1 1348.3 1156.2 994.32 1486.4 1404.1 1404.2 992.11 1475.5 1527 FALSE TRUE 1342.315441 1260.525425 1077.720365 1070.902699 1427.19354 1483.598929 1310.52838 983.4360869 1628.883505 1716.176288 0.782154753 0.73449647 0.627977657 0.624005066 0.831612434 0.86447933 0.763632728 0.573039083 0.949135305 1 10.74498204 -6.274911458 24.48549855 0.807342394 0.690598281 0.237932902 0.11685464 1043.163976 1895946.446 0.036496536 0.041622922 5.31E-07 6.274911458 -0.116744113 DEGNYLDDALVR ddPTM_A459_MK2206_30min_R2 3 DEGNYLDDALVR 12 0 P09525;Q6P452;P09525-2 P09525 ANXA4 Annexin A4;Annexin 0 ;; 175.74 0.0014331 19831000 43030.2 48309.3 44912.5 51479 38078.6 42036.2 44956.7 37976.4 34703.5 51485.5 FALSE TRUE 46324.6252 45910.33041 46409.86033 47273.00103 36583.44283 43635.91705 39053.83129 42940.04587 37721.9477 49805.53235 0.93011003 0.921791782 0.931821389 0.949151606 0.734525686 0.876125904 0.78412637 0.862154139 0.75738469 1 15.60401838 -6.228168735 24.76219841 0.828267817 0.932302706 0.314077797 0.070064618 620.0968178 461516.5784 0.018922659 0.024427336 5.91E-07 6.228168735 0.10403489 DEGS(ph)YSLEEPK ddPTM_A459_MK2206_30min_R1 1 DEGSYSLEEPK 11 0 P18827 P18827 SDC1 Syndecan-1 1 DEGS(1)YSLEEPK 142.91 0.0035677 0 954.53 977.87 982.56 927.52 1028.3 955.81 1049 974.77 1261.2 1233.7 TRUE FALSE 873.3422111 914.2104853 915.8665648 998.9577511 987.3406335 1009.927136 979.023124 966.2476887 1392.306253 1386.54007 0.629871599 0.659346603 0.660541 0.720468 0.712089506 0.728379337 0.706090754 0.696876859 1.004158685 1 10.43727359 -8.258766784 7.670923473 1.003471121 0.69070495 0.947792434 0.029371692 0.024826555 14.26890847 0.025957346 0.008394069 5.51E-09 8.258766784 -0.312766172 DEILPT(ph)TPISEQK ddPTM_A459_MK2206_30min_R1 3 DEILPTTPISEQK 13 0 P23396;P23396-2;H0YEU2;E9PL09;E9PSF4;E9PPU1 P23396 RPS3 40S ribosomal protein S3 1 DEILPT(0.515)T(0.485)PISEQK;DEILPT(0.5)T(0.5)PISEQK;DEILPT(0.647)T(0.351)PIS(0.003)EQK 263.98 1.01E-29 2163870000 31029.2 33087.3 32887.9 26883.7 25894.1 22021.2 27109.8 28421.3 28304 25797 TRUE FALSE 28390.0036 30933.31076 30655.56098 28954.28723 24862.68317 23268.02131 25301.35471 28172.81557 31246.30209 28992.92712 0.979204462 1.066926103 1.057346188 0.998667265 0.857543051 0.802541296 0.872673346 0.971713393 1.077721541 1 14.82341337 -6.051557293 6.061117731 0.919887523 1.036518964 0.273113522 0.076529999 0.27412945 23.51572934 0.024744072 0.032718655 8.88E-07 6.051557293 0.116631441 DEILPT(ph)TPISEQK ddPTM_A459_MK2206_30min_R2 4 DEILPTTPISEQK 13 0 P23396;P23396-2;H0YEU2;E9PL09;E9PSF4;E9PPU1 P23396 RPS3 40S ribosomal protein S3 1 DEILPT(0.996)T(0.004)PISEQK;DEILPT(0.924)T(0.076)PISEQK;DEILPT(0.896)T(0.104)PISEQK;DEILPT(0.669)T(0.328)PIS(0.003)EQK 240.73 1.82E-17 1723159300 2021022 2492898 2289632 2174845 2068974 1576361 2384873 1645095 1615377 1990932 TRUE FALSE 2175752.998 2369104.31 2365967.188 1997153.207 1987735.685 1636350.522 2071736.31 1860114.565 1755879.572 1925968.052 1.129693193 1.230084948 1.228456093 1.036960714 1.032070954 0.849624957 1.075685709 0.965807591 0.911686759 1 20.87715234 -5.941044333 2.633854565 0.970390576 1.200354143 0.70198067 0.064705834 0.147241895 2.071014172 0.019408069 0.030552176 1.15E-06 5.941044333 0.229963567 DEILPTT(ph)PISEQK ddPTM_A459_MK2206_30min_R1 4 DEILPTTPISEQK 13 0 P23396;P23396-2;H0YEU2;E9PL09;E9PSF4;E9PPU1 P23396 RPS3 40S ribosomal protein S3 1 DEILPT(0.022)T(0.977)PIS(0.001)EQK;DEILPT(0.002)T(0.998)PISEQK;DEILPT(0.043)T(0.956)PISEQK;DEILPT(0.012)T(0.976)PIS(0.012)EQK 233.28 4.92E-13 1861817300 36752.9 40042.9 38314.9 31793 30677 27530.6 33186.6 33633.1 34672.1 30167.9 TRUE FALSE 33626.87286 37436.09993 35714.19134 34241.70237 29455.07013 29089.35878 30972.78247 33339.04935 38276.38887 33905.32721 0.991787298 1.104136223 1.05335044 1.009921012 0.868744606 0.857958356 0.913507847 0.983298263 1.128919613 1 15.04922435 -6.017579768 7.323665561 0.949493457 1.051677074 0.219474377 0.076439296 0.242816355 67.27995638 0.023984061 0.032687319 9.60E-07 6.017579768 0.102183617 DEILPTT(ph)PISEQK ddPTM_A459_MK2206_30min_R2 5 DEILPTTPISEQK 13 0 P23396;P23396-2;H0YEU2;E9PL09;E9PSF4;E9PPU1 P23396 RPS3 40S ribosomal protein S3 1 DEILPT(0.311)T(0.68)PIS(0.009)EQK;DEILPT(0.215)T(0.773)PIS(0.012)EQK;DEILPT(0.225)T(0.775)PISEQK;DEILPT(0.022)T(0.977)PISEQK;DEILPT(0.263)T(0.733)PIS(0.004)EQK 252.46 1.00E-22 1685011700 1406028 1589430 1397733 1415393 1342600 1064385 1405494 1165409 1085293 1355473 TRUE FALSE 1513674.585 1510501.217 1444332.721 1299750.864 1289882.778 1104890.917 1220950.949 1317731.958 1179689.823 1311244.027 1.154380538 1.151960418 1.101498036 0.991234917 0.983709173 0.842627989 0.931139379 1.00494792 0.899672219 1 20.32250477 -5.773325279 1.673721924 0.937244283 1.157852756 0.786439659 0.045465552 0.164508103 0.937190607 0.014760493 0.031279382 1.69E-06 5.773325279 0.220608472 DELHIVEAEAMNY(ph)EGSPIK ddPTM_A459_MK2206_30min_R2 2 DELHIVEAEAMNYEGSPIK 19 0 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 DELHIVEAEAMNY(0.965)EGS(0.035)PIK;DELHIVEAEAMNY(0.592)EGS(0.408)PIK 114.63 0.0020307 9257900 84684 52692 54834 61780 57153 41242.5 68903 58843 40528 76359 TRUE FALSE 91167.47215 50075.3919 56662.13819 56732.37638 54908.88605 42812.01224 59855.95333 66533.98214 44053.05218 73867.41208 1.234204226 0.677909114 0.767078967 0.768029836 0.743343844 0.579579154 0.810316101 0.900721716 0.596380067 1 16.17265041 -4.755964087 24.99781352 0.753098302 1.234204987 0.578525087 0.121187263 118.7768163 542226.2313 0.028477668 0.240199918 1.75E-05 4.755964087 0.481106685 DELHIVEAEAMNY(ph)EGSPIKVTLATLK ddPTM_A459_MK2206_30min_R1 3 DELHIVEAEAMNYEGSPIKVTLATLK 26 1 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 DELHIVEAEAMNY(0.95)EGS(0.05)PIKVTLATLK;DELHIVEAEAMNY(0.96)EGS(0.04)PIKVTLATLK;DELHIVEAEAMNY(0.988)EGS(0.012)PIKVTLATLK 143.17 2.25E-09 272073000 12558.8 14449.9 13902.6 10332.6 9723.8 9770.5 11949.4 10402 13002.6 14516.5 TRUE FALSE 11490.60811 13509.20888 12958.93025 11128.41864 9336.480456 10323.69727 11152.27733 10311.05641 14354.2668 16314.91361 0.704300886 0.82802822 0.794299655 0.682100985 0.572266619 0.632776704 0.68356337 0.632001901 0.879824873 1 13.99390373 -8.463688088 3.849159675 0.998343187 0.693363298 0.672341518 0.071711179 0.132816432 4.002264532 0.07933446 0.020862123 3.44E-09 8.463688088 -0.304979888 DELHIVEAEAMNY(ph)EGSPIKVTLATLK ddPTM_A459_MK2206_30min_R2 2 DELHIVEAEAMNYEGSPIKVTLATLK 26 1 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 DELHIVEAEAMNY(0.541)EGS(0.458)PIKVT(0.002)LATLK;DELHIVEAEAMNY(0.863)EGS(0.137)PIKVTLATLK 115.83 7.09E-08 153925000 525220 537300 581480 533940 540930 401430 678150 463280 426910 577880 TRUE FALSE 565431.247 510618.4633 600866.253 490315.394 519690.3702 416706.6999 589108.0904 523832.2867 464041.8601 559023.8229 1.011461809 0.913410918 1.0748491 0.877092127 0.92963904 0.745418501 1.053815716 0.937048235 0.830093175 1 19.09255024 -5.787433586 24.99621692 0.907718406 0.991257753 0.17494726 0.088296008 394.416102 379271.7815 0.024451445 0.036280174 1.63E-06 5.787433586 0.083539348 DELHIVEAEAMNYEGS(ph)PIK ddPTM_A459_MK2206_30min_R1 16 DELHIVEAEAMNYEGSPIK 19 0 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 DELHIVEAEAMNY(0.067)EGS(0.933)PIK;DELHIVEAEAMNY(0.094)EGS(0.906)PIK;DELHIVEAEAMNY(0.003)EGS(0.997)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNY(0.014)EGS(0.986)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNY(0.084)EGS(0.916)PIK;DELHIVEAEAMNY(0.429)EGS(0.571)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNY(0.001)EGS(0.999)PIK 300.56 1.94E-100 806557600 84727.46 100703.7 89043.94 56980.55 54678.45 65224.79 95746.1 65776.21 137024.2 194185.6 TRUE FALSE 77520.94461 94147.87083 82999.88544 61369.20183 52500.49155 68917.76124 89359.05237 65201.13553 151268.3559 218242.7782 0.355205085 0.431390544 0.380309883 0.281196942 0.240560041 0.315784842 0.409447924 0.298755066 0.69311964 1 17.73557439 -8.490589086 2.742286121 0.998272653 0.339035838 0.931303661 0.058006502 0.062148707 1.068171257 0.061229179 0.016504812 3.23E-09 8.490589086 -0.659236815 down DELHIVEAEAMNYEGS(ph)PIK ddPTM_A459_MK2206_30min_R2 11 DELHIVEAEAMNYEGSPIK 19 0 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 DELHIVEAEAMNY(0.001)EGS(0.999)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNY(0.003)EGS(0.997)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNY(0.084)EGS(0.916)PIK;DELHIVEAEAMNY(0.104)EGS(0.896)PIK;DELHIVEAEAMNY(0.019)EGS(0.981)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNY(0.001)EGS(0.999)PIK;DELHIVEAEAMNY(0.001)EGS(0.999)PIK 214.79 2.03E-17 340815100 1649901 915373 1203080 1010429 821311 672108 1307789 1069463 731523 1380676 TRUE FALSE 1776218.689 869916.9079 1243190.087 927873.7185 789062.2034 697685.5409 1136074.733 1209245.486 795149.5482 1335624.655 1.329878632 0.651318396 0.930793005 0.694711433 0.5907814 0.522366473 0.850594311 0.90537823 0.595339076 1 20.3490832 -4.756090843 24.99200954 0.74120223 1.329879559 0.554134857 0.156164494 128.3328883 599593.9479 0.038855508 0.324775632 1.75E-05 4.756090843 0.588677329 DELHIVEAEAMNYEGS(ph)PIKVTLATLK ddPTM_A459_MK2206_30min_R1 5 DELHIVEAEAMNYEGSPIKVTLATLK 26 1 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 DELHIVEAEAMNY(0.216)EGS(0.778)PIKVT(0.005)LAT(0.001)LK;DELHIVEAEAMNY(0.464)EGS(0.525)PIKVT(0.009)LAT(0.002)LK;DELHIVEAEAMNY(0.17)EGS(0.826)PIKVT(0.004)LAT(0.001)LK;DELHIVEAEAMNY(0.303)EGS(0.697)PIKVTLATLK;DELHIVEAEAMNY(0.219)EGS(0.78)PIKVT(0.001)LATLK 119.34 4.63E-09 475006200 14266.4 14536.24 14903.07 11211.04 10936.08 10651.07 12857.71 11619.59 14740.55 14980.83 TRUE FALSE 13052.96776 13589.92813 13891.49113 12074.51624 10500.47278 11254.12438 11999.99563 11518.00115 16272.88292 16836.76832 0.775265628 0.807157756 0.825068734 0.717151654 0.623663198 0.668425446 0.71272559 0.684098096 0.966508692 1 14.03932763 -8.280310438 10.9631074 0.983595181 0.726493683 0.749584812 0.059315522 0.431861569 244.1322955 0.062397852 0.017192932 5.24E-09 8.280310438 -0.257101498 DELHIVEAEAMNYEGS(ph)PIKVTLATLK ddPTM_A459_MK2206_30min_R2 4 DELHIVEAEAMNYEGSPIKVTLATLK 26 1 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 DELHIVEAEAMNY(0.167)EGS(0.824)PIKVT(0.008)LAT(0.001)LK;DELHIVEAEAMNY(0.009)EGS(0.957)PIKVT(0.011)LAT(0.023)LK;DELHIVEAEAMNY(0.054)EGS(0.849)PIKVT(0.085)LAT(0.012)LK;DELHIVEAEAMNY(0.12)EGS(0.876)PIKVT(0.004)LATLK 120.25 3.31E-09 214382000 460299 489697.6 499554 462388 466638 348869.8 525806 401612.8 356827.5 586484 TRUE FALSE 495539.8453 465379.9293 516208.881 424609.4213 448315.4475 362146.2847 456767.0406 454104.9719 387863.711 567347.0751 0.87343333 0.820273779 0.909864356 0.748412109 0.790196102 0.638315241 0.805092792 0.800400657 0.683644506 1 19.11387205 -5.771664158 24.96628832 0.768007867 0.863098821 0.146880658 0.092296487 320.6711486 782997.1712 0.024413054 0.03667121 1.69E-06 5.771664158 0.095090953 DELHIVEAEAMNYEGSPIK ddPTM_A459_MK2206_30min_R1 4 DELHIVEAEAMNYEGSPIK 19 0 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 0 ;;; 203.56 1.36E-15 40521300 16144.5 17449.1 14863.8 11359.5 13429.4 14257.3 17102.6 14569.3 15137.3 18677.4 FALSE TRUE 14771.3255 16313.16042 13854.88667 12234.41066 12894.47856 15064.53601 15961.71676 14441.92215 16710.8765 20991.29732 0.70368807 0.77713922 0.660030033 0.582832517 0.614277353 0.717656264 0.760396869 0.687995693 0.796085933 1 14.35750371 -8.918884527 0.761330202 1.003289964 0.676237931 0.748310197 0.055632597 0.748042987 0.776140718 0.064682535 0.022210643 1.21E-09 8.918884527 -0.327052034 DELHIVEAEAMNYEGSPIKVTLATLK ddPTM_A459_MK2206_30min_R1 5 DELHIVEAEAMNYEGSPIKVTLATLK 26 1 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 0 ;;;; 179.7 1.24E-21 79493200 11689.06 12258.92 11519.62 9747.04 10200.9 8419.71 10589.05 9797.68 11544.41 12277.6 FALSE TRUE 10694.84407 11460.86208 10737.70029 10497.75871 9794.576552 8896.426704 9882.673795 9712.019917 12744.49273 13798.64178 0.775064984 0.830578999 0.778170813 0.76078203 0.709821786 0.644732057 0.716206273 0.703838832 0.923604869 1 13.75223865 -8.401345478 3.832801172 0.996554514 0.74015609 0.772755123 0.048821135 0.115055486 2.793486715 0.05434359 0.014354074 3.97E-09 8.401345478 -0.256398424 DELT(ph)ESPK ddPTM_A459_MK2206_30min_R1 1 DELTESPK 8 0 Q8NC51;Q8NC51-2 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELT(0.578)ES(0.422)PK 109.83 0.028726 70222000 10087 14800 12465 8043.9 3710.6 4306.4 7500.1 5449.6 14848 15844 TRUE FALSE 9229.047681 13836.51731 11618.91053 8663.442572 3562.798945 4550.224646 6999.782014 5401.954722 16391.50273 17806.87434 0.518285664 0.777032344 0.65249579 0.486522363 0.200079973 0.255531912 0.393094368 0.303363444 0.920515438 1 14.12014668 -8.328513153 6.182749028 0.977887931 0.45115015 0.598485488 0.167823905 0.198067846 14.03978817 0.18589437 0.048712871 4.69E-09 8.328513153 -0.526737781 DELT(ph)ESPK ddPTM_A459_MK2206_30min_R2 3 DELTESPK 8 0 Q8NC51;Q8NC51-2 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELT(0.5)ES(0.5)PK;DELT(0.5)ES(0.5)PK;DELT(0.718)ES(0.282)PK 123.96 0.013229 312260000 997150 536352 712430 434304 414686 247681 685760 451561 257750 659620 TRUE FALSE 1073492.571 509717.5396 736182.0606 398819.9739 398403.344 257106.674 595718.8883 510581.5731 280168.6291 638096.6534 1.682335372 0.798809298 1.153715596 0.625014991 0.624362065 0.402927476 0.933587232 0.800163377 0.439069266 1 19.28341544 -1.99144517 0.918135656 0.695878985 200 0.602889034 0.22631038 252.9406957 1.363470129 0.073301857 104588.6023 0.010198935 1.99144517 199.304121 DELTDLDQS(ph)NVTEETPEGEEHHPVADTENK ddPTM_A459_MK2206_30min_R1 1 DELTDLDQSNVTEETPEGEEHHPVADTENK 30 0 Q8NC51-3;Q8NC51-4 Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELT(0.007)DLDQS(0.936)NVT(0.056)EET(0.001)PEGEEHHPVADTENK 76.937 1.98E-05 3031500 425.52 557.54 288.56 306.28 301.98 403.98 453.37 335.54 604.82 847.16 TRUE FALSE 389.3272895 521.2440447 268.9733512 329.8697387 289.9514971 426.8529985 423.1265145 332.6064092 667.6932034 952.1125765 0.408908882 0.547460518 0.282501626 0.346460856 0.304534888 0.448321983 0.444408072 0.34933517 0.701275479 1 9.894988356 -8.508446283 2.777621575 0.998595377 0.391925509 0.870845592 0.075026009 0.08368302 1.529740735 0.074971613 0.020162241 3.10E-09 8.508446283 -0.606669868 down DELTES(ph)PK ddPTM_A459_MK2206_30min_R1 2 DELTESPK 8 0 Q8NC51;Q8NC51-2 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELT(0.007)ES(0.993)PK;DELTES(1)PK 129.88 0.0039638 86512000 14666.7 20349.7 19600.6 12759.9 7126.3 7120.9 11645.3 9010.2 22236.9 26228.2 TRUE FALSE 13419.22015 19024.93083 18270.16588 13742.66971 6842.444381 7524.079204 10868.46329 8931.424771 24548.50533 29477.54743 0.4552353 0.645404129 0.619799389 0.466208043 0.232123938 0.255247802 0.368703106 0.302990769 0.83278656 1 14.84732887 -8.41026221 4.15190047 0.992930558 0.421810961 0.698602092 0.132661335 0.135976014 3.710260791 0.14854045 0.03900854 3.89E-09 8.41026221 -0.571119597 DELTES(ph)PK ddPTM_A459_MK2206_30min_R2 1 DELTESPK 8 0 Q8NC51;Q8NC51-2 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELT(0.157)ES(0.843)PK 97.456 0.020254 14472000 116780 72174 83539 56674 52982 36131 78462 55200 34556 74431 TRUE FALSE 125720.7666 68589.94411 86324.14857 52043.55291 50901.66047 37505.99052 68159.84515 62414.82953 37561.61842 72002.32257 1.746065434 0.952607384 1.198907834 0.722803808 0.706944702 0.520899732 0.94663398 0.86684467 0.521672317 1 16.13575582 -1.559288562 0.782623158 0.753777356 199.9999932 0.690254779 0.190642453 235.3270731 0.943129184 0.067970331 82894.67075 0.027587442 1.559288562 199.2462158 DELTES(ph)PKYIQK ddPTM_A459_MK2206_30min_R1 1 DELTESPKYIQK 12 1 Q8NC51;Q8NC51-2 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELT(0.03)ES(0.97)PKYIQK 97.631 0.0088128 47603000 11276 14425 13272 13783 8068.4 7194.2 8255.9 9542.4 8294.5 4532.1 TRUE FALSE 10316.91699 13485.92988 12371.13362 14844.56905 7747.018543 7601.529387 7705.163975 9458.971803 9156.742957 5093.570764 2.025478287 2.64763768 2.428774271 2.914373774 1.520940594 1.492377301 1.512723457 1.857041404 1.797706046 1 12.31446167 -6.275335795 24.96143762 1.570225372 2.508943138 0.716990355 0.299121931 418.8965 752441.2176 0.090664757 0.103321773 5.30E-07 6.275335795 0.938717766 DELTES(ph)PKYIQK ddPTM_A459_MK2206_30min_R2 1 DELTESPKYIQK 12 1 Q8NC51;Q8NC51-2 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELT(0.001)ES(0.999)PKYIQK 138.77 0.005761 5695100 29451 32268 32254 28518 32726 21147 32197 23561 23348 31138 TRUE FALSE 31705.7912 30665.61804 33329.33226 26187.98818 31441.01281 21951.7639 27969.49522 26640.5036 25378.76684 30121.96961 1.05258028 1.018048237 1.106479181 0.869398267 1.043790071 0.728762567 0.92854138 0.884421037 0.842533445 1 14.87852849 -5.980802445 1.516342874 0.883764663 1.055115422 0.360047849 0.088585126 0.400557463 1.865167284 0.02890957 0.051255689 1.05E-06 5.980802445 0.171350759 DENQSINHQMAQEDAQR ddPTM_A459_MK2206_30min_R1 2 DENQSINHQMAQEDAQR 17 0 P20073-2;P20073 P20073-2 ANXA7 Annexin A7 0 ; 173.19 8.75E-06 12052300 4870.7 3120.9 3832.1 2633.8 4367.5 5178.6 5463.9 3907.5 3490.8 3747.3 FALSE TRUE 4456.421388 2917.728843 3571.987729 2836.655732 4193.533227 5471.807857 5099.4132 3873.337139 3853.681152 4211.543815 1.058144373 0.692793183 0.848142127 0.673542971 0.995723519 1.299240397 1.210818034 0.919695321 0.915028152 1 12.04013346 -6.509134984 23.82505344 1.081101266 0.814254305 0.389605152 0.148257859 358.2376276 621012.8405 0.049017745 0.053276933 3.10E-07 6.509134984 -0.266846961 DENQSINHQMAQEDAQR ddPTM_A459_MK2206_30min_R2 1 DENQSINHQMAQEDAQR 17 0 P20073-2;P20073 P20073-2 ANXA7 Annexin A7 0 93.152 0.02382 0 4021.4 5360.8 6531.6 8621.4 7468.1 7302.5 7053.4 4437.3 4853.6 5514.5 FALSE TRUE 4329.281476 5094.590467 6749.360284 7917.004042 7174.86487 7580.401755 6127.280107 5017.270346 5275.757355 5334.562317 0.811553267 0.955015644 1.265213505 1.484096271 1.344977234 1.420997882 1.148600343 0.940521461 0.98897661 1 12.38115419 -7.633224953 4.730421536 0.975527487 1.226922556 0.231068181 0.191969486 0.344932128 12.77084165 0.10766779 0.059921783 2.33E-08 7.633224953 0.251395069 DEPAESPS(ph)ETPGPR ddPTM_A459_MK2206_30min_R2 1 DEPAESPSETPGPR 14 0 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 DEPAES(0.278)PS(0.457)ET(0.265)PGPR 83.292 0.028087 9510800 21205 14201 14339 18662 15648 12037 15994 13402 13241 17159 TRUE FALSE 22828.4711 13495.79899 14817.0551 17137.2549 15033.5809 12495.07647 13893.96859 15153.68742 14392.67825 16599.10324 1.375283398 0.813043861 0.892641903 1.032420527 0.90568633 0.752756115 0.837031278 0.912922054 0.867075651 1 14.01881768 -4.756161849 24.99994678 0.886693468 1.375284161 0.775067323 0.078341257 79.85030624 378214.0836 0.020346098 0.168896633 1.75E-05 4.756161849 0.488590693 DEPAESPS(ph)ETPGPRPAGPAGDEPAESPSETPGPR ddPTM_A459_MK2206_30min_R2 1 DEPAESPSETPGPRPAGPAGDEPAESPSETPGPR 34 1 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 DEPAES(0.138)PS(0.431)ET(0.431)PGPRPAGPAGDEPAESPSETPGPR 93.679 9.18E-10 9846900 9214.6 10269 8763.5 10404 9562.3 8994 9115.3 8431.8 6541 10427 TRUE FALSE 9920.076861 9759.056393 9055.670716 9553.959919 9186.836055 9336.272972 7918.450161 9533.865211 7109.924357 10086.76784 0.983474292 0.967510757 0.897777252 0.947177537 0.910780956 0.925596099 0.78503345 0.945185352 0.704876375 1 13.30017634 -7.079272633 9.231988268 0.854123458 0.9384866 0.199178207 0.078732477 0.659857316 72.95847101 0.027873228 0.021600829 8.33E-08 7.079272633 0.084363142 DEPDS(ph)PVLYR ddPTM_A459_MK2206_30min_R2 2 DEPDSPVLYR 10 0 Q6ZTQ3-4;Q6ZTQ3-3;Q6ZTQ3-2;Q6ZTQ3 Q6ZTQ3-4 RASSF6 Ras association domain-containing protein 6 1 DEPDS(1)PVLYR;DEPDS(1)PVLYR 139.32 0.00154 12479600 147146 124657 127060 122720 103324 85657 136795 104022 85650 135475 TRUE FALSE 158411.6109 118466.7146 131296.117 112693.3834 99266.9806 88916.73716 118833.6522 117618.0326 93099.68218 131054.4618 1.208746415 0.903950258 1.001843929 0.859897342 0.75744831 0.678471651 0.906750144 0.897474461 0.71038926 1 16.99980695 -1.522878765 0.750993755 0.823410714 67.27225079 0.53082867 0.102093039 294.7805211 1.267360739 0.038253356 33141.72093 0.029999999 1.522878765 66.44884007 DEPPPLS(ph)PAPLTPATPSSLDPFFSR ddPTM_A459_MK2206_30min_R1 2 DEPPPLSPAPLTPATPSSLDPFFSR 25 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DEPPPLS(1)PAPLTPATPSSLDPFFSR;DEPPPLS(1)PAPLTPATPSSLDPFFSR 147.64 5.68E-10 27787000 3206.04 3147.77 3272.61 2267.23 2565.03 2143.68 2922.63 2395.19 3189.41 2983.29 TRUE FALSE 2933.349462 2942.849601 3050.474351 2441.852447 2462.859424 2265.053309 2727.666685 2374.249106 3520.960583 3352.882488 0.874873925 0.877707349 0.909806521 0.72828453 0.734549878 0.67555404 0.813528865 0.708121777 1.050129432 1 11.7111862 -8.270051275 24.99575198 1.025064761 0.790223727 0.604286151 0.075989878 515.1623396 1495223.232 0.076138928 0.020894363 5.37E-09 8.270051275 -0.234841033 DEPPPLS(ph)PAPLTPATPSSLDPFFSR ddPTM_A459_MK2206_30min_R2 3 DEPPPLSPAPLTPATPSSLDPFFSR 25 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DEPPPLS(1)PAPLTPATPSSLDPFFSR;DEPPPLS(0.997)PAPLT(0.002)PATPSSLDPFFSR;DEPPPLS(1)PAPLTPATPSSLDPFFSR 91.064 2.76E-05 7076600 14312.9 12141.9 13580.2 14996.7 11059.2 10192.1 10905.1 8372.8 8949.29 12737.6 TRUE FALSE 15408.70663 11538.9509 14032.95709 13771.42164 10624.96024 10579.96751 9473.247271 9467.153708 9727.683068 12321.97316 1.250506427 0.936453177 1.138856327 1.1176312 0.862277503 0.85862608 0.768809277 0.768314749 0.789458226 1 13.58894568 -6.320964315 4.122356755 0.822527711 1.101425791 0.654364309 0.095596795 0.134970798 4.691541096 0.029211289 0.034090642 4.78E-07 6.320964315 0.278898081 DEPSVAAMVYPFTGDHK ddPTM_A459_MK2206_30min_R2 1 DEPSVAAMVYPFTGDHK 17 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 0 106.35 0.0070648 0 17192 17895 18986 21656 22558 17821 21401 14769 16338 19426 FALSE TRUE 18508.23274 17006.36032 19618.98376 19886.63553 21672.25958 18499.19064 18591.02299 16699.35901 17759.04971 18792.13121 0.984892694 0.904972413 1.043999935 1.058242692 1.153262466 0.98441153 0.989298275 0.888635718 0.945025847 1 14.19784107 -10.12273151 6.236560111 0.999982329 0.996501404 0 0.073237446 0 0 0.078687227 0.019084456 7.54E-11 10.12273151 -0.003480925 DEQLS(ph)PEEEEK ddPTM_A459_MK2206_30min_R1 1 DEQLSPEEEEK 11 0 P15408;P15408-3;P15408-2;C9JCN8 P15408 FOSL2 Fos-related antigen 2 1 DEQLS(1)PEEEEK 113.37 0.0071372 8687600 3682.2 3335.5 4008.8 3293.2 2717.8 2830.1 2968.2 3046.2 4096.1 3960 TRUE FALSE 3369.009554 3118.358344 3736.693825 3546.842835 2609.544271 2990.337816 2770.196794 3019.567395 4521.904253 4450.594696 0.756979636 0.700661048 0.839594274 0.796936831 0.586336085 0.671896234 0.622432952 0.678463801 1.016022478 1 12.11978241 -8.263680831 24.98509612 1.008011289 0.70592533 0.736068136 0.072178792 109.8242898 1224150.168 0.065661932 0.020129305 5.45E-09 8.263680831 -0.302085959 DEQLS(ph)PEEEEK ddPTM_A459_MK2206_30min_R2 2 DEQLSPEEEEK 11 0 P15408;P15408-3;P15408-2;C9JCN8 P15408 FOSL2 Fos-related antigen 2 1 DEQLS(1)PEEEEK;DEQLS(1)PEEEEK 181.71 4.06E-05 30154000 138127 114180 121653 101788 92949 65932 124590 92537 74519 124229 TRUE FALSE 148702.1093 108509.9872 125708.8503 93471.5948 89299.35523 68441.08846 108231.1833 104631.9036 81000.52792 120175.4179 1.237375429 0.902929976 1.046044628 0.777792967 0.743075055 0.569509885 0.900610002 0.870659786 0.674019108 1 16.87478229 -5.761279824 23.2583004 0.778785596 1.046198097 0.45188843 0.136139996 1.581088069 230194.9474 0.037021793 0.059263721 1.73E-06 5.761279824 0.267412501 DEREDITHTYK ddPTM_A459_MK2206_30min_R2 1 DEREDITHTYK 11 1 P21980-2;P21980 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 0 94.465 0.017671 5876500 79261 86148 89426 94124 81269 75627 77432 71388 63664 84849 FALSE TRUE 85329.2831 81870.01559 92407.41821 86433.76811 78077.97072 78505.03848 67265.08539 80718.65671 69201.37964 82080.38408 1.039581918 0.997437043 1.125816104 1.053038056 0.951237882 0.956440925 0.819502566 0.983409832 0.843092785 1 16.32474986 -6.419328634 2.425175309 0.913320877 1.055866898 0.522415692 0.060505637 0.228472169 2.637910343 0.02015811 0.023088266 3.81E-07 6.419328634 0.142546021 DES(ph)TDSGLSMSSYSVPR ddPTM_A459_MK2206_30min_R1 1 DESTDSGLSMSSYSVPR 17 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8;H0YCI3;P46937-4 P46937-6 YAP1 Transcriptional coactivator YAP1 1 DES(0.5)T(0.5)DSGLSMSSYSVPR 231.71 1.61E-16 3109700 1736.9 1444.9 891.6 970.62 1225.2 1163 1145.4 1174.9 1233.2 1070.9 TRUE FALSE 1589.167534 1350.836747 831.0806761 1045.377321 1176.39769 1228.848055 1068.992456 1164.627973 1361.395553 1203.571177 1.320376862 1.122357176 0.690512279 0.868562941 0.977422617 1.021001565 0.888183829 0.967643622 1.131130073 1 10.23310575 -5.004744437 6.52018209 0.938736878 1.27752051 0.538942009 0.109981216 0.094542127 21.48867603 0.028890432 0.096470582 9.89E-06 5.004744437 0.338783632 DESANQEEPEAR ddPTM_A459_MK2206_30min_R2 2 DESANQEEPEAR 12 0 P50552;K7EM16 P50552 VASP Vasodilator-stimulated phosphoprotein 0 ; 151.79 0.0071079 5829700 14639.3 17684.2 14080 17491.9 19597.6 18097.7 17511.2 13931.9 17024.6 18181.3 FALSE TRUE 15760.09606 16806.02834 14549.42017 16062.75582 18828.09975 18786.42066 15211.95841 15752.84717 18505.36893 17588.04567 0.896068634 0.955536997 0.827233477 0.913276899 1.070505507 1.068135767 0.864903281 0.895656485 1.052156066 1 14.10230756 -6.023722539 24.37812616 0.984843159 0.894380388 0.298828221 0.070447129 808.1448193 830478.062 0.022278819 0.028955179 9.47E-07 6.023722539 -0.090462771 DESSPYAAMLAAQDVAQR ddPTM_A459_MK2206_30min_R1 1 DESSPYAAMLAAQDVAQR 18 0 P62263;A0A2R8Y811;E5RH77 P62263 RPS14 40S ribosomal protein S14 0 187.62 3.75E-13 0 863.57 975.2 1136.2 951.28 1126.7 1001.7 1044 1067.6 1095.4 1393.5 FALSE TRUE 790.1188367 911.7143027 1059.07791 1024.54775 1081.821153 1058.415388 974.3566649 1058.266086 1209.27075 1566.1373 0.50450164 0.582142002 0.676235672 0.654187695 0.690757543 0.675812643 0.622140003 0.675717311 0.772135846 1 10.61299498 -14.52287875 0.135052687 2.208569782 0.514597541 0.866299142 0.045546278 53.57121621 0.448200994 17.37253811 0.341964713 3.00E-15 14.52287875 -1.693972241 DET(ph)PTLEASLDNANSR ddPTM_A459_MK2206_30min_R1 1 DETPTLEASLDNANSR 16 0 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915 H0Y9X0 FRYL Protein furry homolog-like 1 DET(0.971)PT(0.029)LEASLDNANSR 216 3.43E-10 3635800 902.2 1236.1 1278.5 840.12 600.83 667.02 1291.9 1010.7 1787.9 2171.1 TRUE FALSE 825.4631524 1155.629665 1191.718982 904.826188 576.8976688 704.786096 1205.719708 1001.863556 1973.758603 2440.072259 0.338294552 0.47360469 0.488394955 0.370819423 0.236426469 0.288838207 0.494132788 0.410587659 0.808893505 1 11.25270816 -8.375564915 2.234987446 1.002291281 0.38149928 0.872385333 0.080702961 0.102669984 1.016081736 0.084213544 0.023611413 4.21E-09 8.375564915 -0.620792001 down DET(ph)PTLEASLDNANSR ddPTM_A459_MK2206_30min_R2 1 DETPTLEASLDNANSR 16 0 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915 H0Y9X0 FRYL Protein furry homolog-like 1 DET(0.985)PT(0.015)LEASLDNANSR 213.69 4.39E-08 3072200 13655 9720.6 11485 8406.8 8189.5 7275.2 8899.9 5927.2 7236.1 11785 TRUE FALSE 14700.4373 9237.889139 11867.90417 7719.937548 7867.939081 7552.062834 7731.332439 6701.905391 7865.482898 11400.45642 1.289460418 0.810308711 1.041002547 0.677160393 0.690142464 0.662435131 0.678159905 0.587862902 0.689927018 1 13.47680396 -1.522878745 0.64052877 0.69029341 47.79658093 0.577593914 0.138513367 136.7409572 0.914555058 0.055698242 9113.629122 0.03 1.522878745 47.10628752 DETEFYLGK ddPTM_A459_MK2206_30min_R1 2 DETEFYLGK 9 0 F8WBS5;F8WB72;C9K025;P18077 F8WBS5 RPL35A 60S ribosomal protein L35a 0 ; 175.44 0.0041306 7623600 4859.3 5119 4472.7 4324.2 4567.3 4252.9 4981.4 4506.9 4239.7 4163.6 FALSE TRUE 4445.991018 4785.75217 4169.105586 4657.250633 4385.37477 4493.695523 4649.099895 4467.496648 4680.431987 4679.418202 0.950116195 1.022723758 0.890945286 0.995262751 0.937162395 0.960310733 0.993520924 0.954711987 1.000216648 1 12.19211345 -8.197476342 0.945709128 1.001560564 0.961061546 0.140076442 0.034489269 1.097635628 1.996635772 0.030730801 0.011052841 6.35E-09 8.197476342 -0.040499018 DETEFYLGK ddPTM_A459_MK2206_30min_R2 2 DETEFYLGK 9 0 F8WBS5;F8WB72;C9K025;P18077 F8WBS5 RPL35A 60S ribosomal protein L35a 0 ; 146.81 0.023625 7567300 43991 54612 46827 48516 48654 41354 53132 39462 38466 56164 FALSE TRUE 47358.98478 51900.04749 48388.18881 44552.08761 46743.59949 42927.75545 46155.70458 44619.81889 41811.70315 54331.37328 0.871669202 0.955250058 0.890612291 0.820006654 0.860342684 0.790109892 0.849522141 0.821253287 0.769568311 1 15.72949789 -5.617811001 4.709448124 0.835797393 0.915645409 0.167264056 0.061850516 0.281182184 10.66537859 0.015754985 0.028187185 2.41E-06 5.617811001 0.079848016 DEVQEVVFVPAGT(ph)HTPGSR ddPTM_A459_MK2206_30min_R2 2 DEVQEVVFVPAGTHTPGSR 19 0 J3KS57;J3KT79;J3QR84;J3QRJ1;J3QL71;Q96FV2-2;Q96FV2 J3KS57 SCRN2 Secernin-2 1 DEVQEVVFVPAGT(0.478)HT(0.478)PGS(0.044)R;DEVQEVVFVPAGT(0.493)HT(0.493)PGS(0.014)R 102.46 0.0014761 24865900 68873 84222 81575 94338 96034 94872 82747 65811 89395 92755 TRUE FALSE 74145.96983 80039.65795 84294.66979 86630.28363 92263.22263 98482.42044 71882.2195 74412.72366 97170.41551 89728.41195 0.826337703 0.892021337 0.939442346 0.965472159 1.028249811 1.097561166 0.80110879 0.829310606 1.08293921 1 16.45327726 -4.998225325 1.672043887 0.96473375 0.809246825 0.207231499 0.090655955 1.168859257 4.419806713 0.027378677 0.257969968 1.00E-05 4.998225325 -0.155486925 DEVQEVVFVPAGTHT(ph)PGSR ddPTM_A459_MK2206_30min_R1 2 DEVQEVVFVPAGTHTPGSR 19 0 J3KS57;J3KT79;J3QR84;J3QRJ1;J3QL71;Q96FV2-2;Q96FV2 J3KS57 SCRN2 Secernin-2 1 DEVQEVVFVPAGT(0.055)HT(0.78)PGS(0.164)R;DEVQEVVFVPAGT(0.019)HT(0.957)PGS(0.024)R 136.26 0.00024105 21921000 9090.5 8668.1 9878.3 7555.5 10169 8668.1 10642.5 10727 8862.5 8416.6 TRUE FALSE 8317.305239 8103.805115 9207.788519 8137.425919 9763.947197 9158.880331 9932.558243 10633.21497 9783.78859 9459.31195 0.879271694 0.856701329 0.973409965 0.860255583 1.0322048 0.968239591 1.050029674 1.124100254 1.034302351 1 13.20751953 -6.475277345 0.955475268 1.061322911 0.881421862 0.641554584 0.050648366 0.328472466 0.649455698 0.02557677 0.031849135 3.35E-07 6.475277345 -0.179901049 DEVQEVVFVPAGTHT(ph)PGSR ddPTM_A459_MK2206_30min_R2 5 DEVQEVVFVPAGTHTPGSR 19 0 J3KS57;J3KT79;J3QR84;J3QRJ1;J3QL71;Q96FV2-2;Q96FV2 J3KS57 SCRN2 Secernin-2 1 DEVQEVVFVPAGT(0.005)HT(0.971)PGS(0.024)R;DEVQEVVFVPAGT(0.035)HT(0.799)PGS(0.166)R;DEVQEVVFVPAGT(0.019)HT(0.888)PGS(0.093)R;DEVQEVVFVPAGT(0.213)HT(0.613)PGS(0.173)R;DEVQEVVFVPAGT(0.007)HT(0.993)PGS(0.001)R 143.72 8.85E-05 33184400 130578.7 185479.6 172726.1 174090.8 178905.2 185362.5 166286 141804.1 187440.4 174960.4 TRUE FALSE 140575.9057 176268.9528 178484.702 159867.0248 171880.4829 192416.5998 144452.4485 160338.3828 203743.6272 169251.4565 0.830574274 1.041461955 1.054553418 0.944553318 1.015533257 1.136868207 0.853478318 0.947338275 1.20379246 1 17.36880872 -4.756835182 24.859127 1.017033206 0.830573972 0.270304699 0.09401983 185.3654316 1000698.938 0.023097777 0.180335161 1.75E-05 4.756835182 -0.186459234 DEVVS(ph)PLPSALQGPSGSLSAPPAASVISAPPSSSSR ddPTM_A459_MK2206_30min_R1 1 DEVVSPLPSALQGPSGSLSAPPAASVISAPPSSSSR 36 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 DEVVS(0.989)PLPS(0.011)ALQGPSGSLSAPPAASVISAPPSSSSR 96.434 7.62E-14 6034600 1695.9 1881 1804.5 1304.4 1733.7 1355.1 2077.8 1582.7 1694.1 1792 TRUE FALSE 1551.654799 1758.546558 1682.015568 1404.865114 1664.643058 1431.824591 1939.193753 1568.862621 1870.207757 2014.006489 0.770431877 0.873158338 0.835158961 0.697547462 0.826533115 0.710933455 0.962853776 0.778975951 0.928600661 1 10.97585262 -8.469618529 0.792595597 1.000781834 0.796193603 0.437492178 0.073230998 0.64053483 0.907913505 0.068794898 0.025709686 3.39E-09 8.469618529 -0.204588231 DEVVS(ph)PLPSALQGPSGSLSAPPAASVISAPPSSSSR ddPTM_A459_MK2206_30min_R2 2 DEVVSPLPSALQGPSGSLSAPPAASVISAPPSSSSR 36 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 DEVVS(0.921)PLPS(0.049)ALQGPS(0.022)GS(0.007)LS(0.002)APPAASVISAPPSSSSR;DEVVS(0.936)PLPS(0.045)ALQGPS(0.007)GS(0.008)LS(0.003)APPAASVISAPPSSSSR 70.257 1.78E-05 21264200 38830.9 43749 42049 47990 48407.8 42271 55275 38417.2 38815.7 55913 TRUE FALSE 41803.82356 41576.48828 43450.89267 44069.06349 46507.06654 43879.65253 48017.3261 43438.45995 42191.81942 54088.56339 0.772877313 0.768674294 0.803328651 0.814757515 0.859831795 0.811255648 0.887753771 0.803098793 0.780050657 1 15.72303596 -14.52287875 0.251226474 2.117957445 0.79759025 0.709577258 0.036015351 108.3444391 1.071182277 62.38987928 0.054981321 3.00E-15 14.52287875 -1.320367195 DEY(ph)ELY(ph)MAT(ph)LLESQPAAQYEALLAQLK ddPTM_A459_MK2206_30min_R2 1 DEYELYMATLLESQPAAQYEALLAQLK 27 0 Q5T5N4 Q5T5N4 C6orf118 Uncharacterized protein C6orf118 3 DEY(0.999)ELY(0.995)MAT(0.947)LLES(0.046)QPAAQY(0.012)EALLAQLK 42.454 0.045765 4638800 2453.8 5392.1 3268.3 7094.5 7210.5 8593.2 2922.5 4144.1 7616.6 2202 TRUE FALSE 2641.664815 5124.336155 3377.263491 6514.856656 6927.37954 8920.220248 2538.772239 4685.748099 8279.0781 2130.14892 1.240131518 2.405623431 1.585458866 3.058404318 3.252063494 4.187604051 1.191828522 2.199727941 3.886619391 1 11.05673858 -5.758597179 24.99845854 2.756665324 1.809926366 0.149425645 1.011707567 143.1912184 1259403.175 0.278134812 0.455680838 1.74E-06 5.758597179 -0.946738958 DEYRQDYDAGR ddPTM_A459_MK2206_30min_R1 1 DEYRQDYDAGR 11 1 C9JQX9;B3KSB0;P52298-3;P52298-2;P52298 C9JQX9 NCBP2 Nuclear cap-binding protein subunit 2 0 125.74 0.0092787 8542500 3402.2 3000.8 3112.8 3274.6 3632.1 2867.7 2955 3110.6 2752.2 2206.1 FALSE TRUE 3112.825024 2805.447375 2901.511809 3526.810259 3487.425766 3030.066696 2757.877342 3083.404352 3038.301039 2479.408323 1.25547091 1.131498732 1.170243635 1.422440276 1.406555642 1.222092653 1.11231269 1.243604905 1.225413745 1 11.27578017 -7.000872803 24.99675276 1.165857437 1.275572925 0.249976489 0.1053326 59.99292607 1718233.261 0.040629604 0.035396617 9.98E-08 7.000872803 0.109715488 DFDFESANAQFNKEEIDR ddPTM_A459_MK2206_30min_R2 1 DFDFESANAQFNKEEIDR 18 1 Q8ND56-3;Q8ND56-2;Q8ND56;A0A140TA76;K7EMZ9 Q8ND56-3;A0A140TA76 LSM14A Protein LSM14 homolog A 0 94.922 0.011629 3461200 4538.2 5496.2 6455.8 6317.7 6406.1 3937.3 5778.3 4570.2 4384.6 6013.2 FALSE TRUE 4885.648081 5223.2667 6671.03315 5801.523701 6154.564326 4087.13671 5019.602269 5167.540832 4765.964582 5816.989776 0.839892843 0.897932935 1.146818785 0.997341223 1.058032516 0.702620577 0.862920937 0.888353088 0.819318026 1 12.50605705 -6.739753429 24.99993567 0.848181911 0.992341546 0.291643302 0.103565494 301.6848262 347786.7011 0.034871931 0.034842094 1.82E-07 6.739753429 0.144159635 DFEEYPEHR ddPTM_A459_MK2206_30min_R2 1 DFEEYPEHR 9 0 O14980 O14980 XPO1 Exportin-1 0 111.06 0.01474 5998600 115680 90520 86138 97837 82480 84230 109710 90802 67528 108470 FALSE TRUE 124536.5497 86024.90843 89009.79793 89843.40413 79241.42077 87435.43167 95304.94521 102670.1332 73401.46338 104930.6328 1.186846457 0.819826452 0.848272764 0.856217119 0.755179099 0.833268888 0.908266182 0.9784572 0.699523689 1 16.67907639 -4.758044972 24.99935414 0.85239672 1.186846923 0.568111795 0.086648207 68.37345943 503481.3913 0.020675776 0.146001229 1.75E-05 4.758044972 0.334450203 DFFHGLR ddPTM_A459_MK2206_30min_R2 1 DFFHGLR 7 0 Q9NTZ6 Q9NTZ6 RBM12 RNA-binding protein 12 0 124.37 0.0092305 1823700 25354 24720 27099 28451 30306 27636 30338 23383 27654 30021 FALSE TRUE 27295.12173 23492.44075 28002.46713 26126.46229 29116.03416 28687.70735 26354.58416 26439.23839 30059.29493 29041.41723 0.939868792 0.808928867 0.964225228 0.899627662 1.002569328 0.987820502 0.907482715 0.910397663 1.035049175 1 14.82582424 -1.52289873 0.182315297 1.001490631 0.463365224 0.258217704 0.054371125 78.99733382 0.898001283 0.120936296 11.81744756 0.02999862 1.52289873 -0.538125406 DFLDGVYAFEYYPS(ph)TPGR ddPTM_A459_MK2206_30min_R1 1 DFLDGVYAFEYYPSTPGR 18 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 1 DFLDGVYAFEY(0.001)Y(0.011)PS(0.494)T(0.494)PGR 90.561 0.0057002 15906000 2289.8 2097.7 2465.2 2134.3 2527.8 2388.3 2864 2252.2 2401.4 2493.9 TRUE FALSE 2095.040486 1961.139349 2297.869092 2298.684156 2427.112373 2523.523482 2672.947786 2232.509253 2651.034123 2802.86316 0.74746442 0.699691436 0.819829211 0.820120008 0.865940374 0.90033774 0.953649049 0.796510256 0.945830735 1 11.4526856 -2.241617267 0.183905629 0.990950331 7.64E-20 0.717104674 0.048380918 24.00082271 0.345682417 0.110153949 6.336040789 0.00573301 2.241617267 -0.990950331 DFLDGVYAFEYYPS(ph)TPGR ddPTM_A459_MK2206_30min_R2 1 DFLDGVYAFEYYPSTPGR 18 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 1 DFLDGVYAFEYY(0.002)PS(0.849)T(0.149)PGR 89.232 0.0062021 5219800 12851 19666 16044 20218 18379 14569 16680 15009 16317 19395 TRUE FALSE 13834.88244 18689.41504 16578.89895 18566.12473 17657.34811 15123.4335 14489.89596 16970.72783 17736.22317 18762.14274 0.737382858 0.9961237 0.88363569 0.989552472 0.941115754 0.806061105 0.772294304 0.904519706 0.945319701 1 14.19553698 -8.438099945 2.623956664 0.997379566 0.882467197 0.187904365 0.082006883 0.474813839 6.791137107 0.080782321 0.021982097 3.65E-09 8.438099945 -0.11491237 DFLDGVYAFEYYPST(ph)PGR ddPTM_A459_MK2206_30min_R2 1 DFLDGVYAFEYYPSTPGR 18 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 1 DFLDGVYAFEY(0.001)Y(0.006)PS(0.175)T(0.818)PGR 83.823 0.019737 5246600 17964 20930 23682 23694 20730 21007 22679 18853 19021 18651 TRUE FALSE 19339.33765 19890.64664 24471.54606 21758.12441 19916.03604 21806.43611 19701.22006 21317.15183 20675.4122 18042.4194 1.071881616 1.102437882 1.356333955 1.205942725 1.103845089 1.208620398 1.091938926 1.181501846 1.145933466 1 14.13910519 -7.263002992 24.92685353 1.119968714 1.177988392 0.12481174 0.086965119 384.316195 6126601.467 0.036482129 0.026071773 5.46E-08 7.263002992 0.058019678 DFLSNEASLGAIGTS(ph)LPSR ddPTM_A459_MK2206_30min_R2 1 DFLSNEASLGAIGTSLPSR 19 0 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 DFLSNEASLGAIGT(0.218)S(0.636)LPS(0.146)R 68.088 0.019742 4812400 13389 13406 13607 15946 18080 18503 20416 21170 20148 30067 TRUE FALSE 14414.07213 12740.27753 14060.65059 14643.16079 17370.08836 19207.14463 17735.35468 23936.99169 21900.43662 29085.91625 0.495568784 0.438022217 0.483417832 0.503445058 0.597199284 0.660358933 0.609757469 0.822975336 0.752956738 1 14.82803313 -7.774708254 0.348193588 1.024484096 0.407522728 0.928164254 0.045143123 0.292140364 0.108876062 0.061431017 0.059642446 1.68E-08 7.774708254 -0.616961368 down DFMIQGGDFTR ddPTM_A459_MK2206_30min_R1 2 DFMIQGGDFTR 11 0 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 ; 204.34 0.0026239 47069600 3411.2 3480 3355.9 2987.7 3320.5 3170.1 3769.2 3065.4 3616.1 3915.3 FALSE TRUE 3121.059527 3253.451367 3128.110858 3217.813172 3188.237454 3349.588322 3517.763545 3038.599531 3992.006535 4400.356923 0.709274175 0.739360789 0.71087662 0.731261856 0.724540647 0.761208325 0.799426866 0.690534787 0.907200621 1 12.10340483 -8.438216221 3.668207282 0.998275275 0.735832935 0.901762812 0.029755569 0.059262383 1.471265994 0.028889681 0.007628064 3.65E-09 8.438216221 -0.26244234 DFMIQGGDFTR ddPTM_A459_MK2206_30min_R2 2 DFMIQGGDFTR 11 0 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 ; 154.15 0.007591 11033000 37157 44963 42611 44062 36259 39245 36483 34372 34448 40045 FALSE TRUE 40001.76849 42730.2028 44031.62947 40461.99365 34835.28947 40738.49598 31692.73828 38864.53842 37444.22477 38738.33493 1.032614555 1.103046966 1.136642283 1.04449491 0.899245916 1.051632602 0.8181234 1.003257845 0.966593552 1 15.24147432 -6.05520621 5.415504001 0.95505878 1.092195622 0.476561121 0.064324227 0.169733775 10.8470203 0.018318386 0.024376367 8.81E-07 6.05520621 0.137136841 DFMLS(ph)FSR ddPTM_A459_MK2206_30min_R1 1 DFMLSFSR 8 0 Q6STE5-2;Q6STE5 Q6STE5-2 SMARCD3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 1 DFMLS(1)FSR 108.09 0.013025 61308000 6546.2 6082.6 6651.5 5240.7 6576.3 5509.6 6711.9 5863.6 4794.1 4965.8 TRUE FALSE 5989.411315 5686.621634 6200.014712 5644.339622 6314.352045 5821.548791 6264.161398 5812.335163 5292.463851 5581.000794 1.073178725 1.018925072 1.110914501 1.011349009 1.131401388 1.04310123 1.122408261 1.041450338 0.948300143 1 12.44630814 -8.08495346 5.04777152 0.976736878 1.071854353 0.482040588 0.040418341 0.180356825 7.666053198 0.026414793 0.009650039 8.22E-09 8.08495346 0.095117475 DFQDYMEPEEGCQGS(ph)PQR ddPTM_A459_MK2206_30min_R1 6 DFQDYMEPEEGCQGSPQR 18 0 O43237-2;O43237;H3BUM4;B4E2E0 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 DFQDYMEPEEGCQGS(1)PQR;DFQDY(0.089)MEPEEGCQGS(0.911)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDY(0.002)MEPEEGCQGS(0.998)PQR;DFQDYMEPEEGCQGS(1)PQR 264.66 3.94E-43 87110100 18215.8 16975.21 17748.11 15277.36 18470.5 16284.13 18798.38 16867.33 17463.44 18236.4 TRUE FALSE 16666.45056 15870.12074 16543.41774 16454.02491 17734.78087 17206.12337 17544.37437 16719.86071 19278.82708 20495.66291 0.813169627 0.77431605 0.807166756 0.802805207 0.865294328 0.8395007 0.856004241 0.815775551 0.940629594 1 14.32303103 -9.273549811 0.235358273 1.069179312 0.772200375 0.810825367 0.028650212 2.523469217 0.277664272 0.214460893 0.066963822 5.33E-10 9.273549811 -0.296978937 DFQDYMEPEEGCQGS(ph)PQR ddPTM_A459_MK2206_30min_R2 10 DFQDYMEPEEGCQGSPQR 18 0 O43237-2;O43237;H3BUM4;B4E2E0 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDY(0.001)MEPEEGCQGS(0.999)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDY(0.004)MEPEEGCQGS(0.996)PQR;DFQDY(0.109)MEPEEGCQGS(0.891)PQR 262.37 8.71E-43 209045300 437306 461857 396399 484646 454728 453080 485094 395352 380357 435946 TRUE FALSE 470786.4836 438921.853 409614.7448 445048.8715 436873.0939 470322.2769 421400.5751 447025.8638 413439.7643 421721.1177 1.116345527 1.040786991 0.971292941 1.055315593 1.035928901 1.115244784 0.999239918 1.060003507 0.980362963 1 18.68592974 -8.342153312 0.007140297 7.27E-05 2.051617331 0.154712809 0.044679212 5588.333541 31.64619057 4574.395128 4514.609294 4.55E-09 8.342153312 2.051544598 DFQDYMEPEEGCQGS(ph)PQRR ddPTM_A459_MK2206_30min_R1 7 DFQDYMEPEEGCQGSPQRR 19 1 O43237-2;O43237;H3BUM4;B4E2E0 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDY(0.007)MEPEEGCQGS(0.993)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR 144.43 3.15E-05 217135800 20515.2 20007.5 17728.1 17412.9 21696.2 18084 20748.6 19376.5 15401.8 13073.9 TRUE FALSE 18770.27451 18705.00811 16524.76597 18754.04458 20831.99441 19107.90045 19364.49875 19207.0933 17002.87223 14693.59343 1.27744616 1.273004333 1.124623874 1.276341601 1.417760366 1.300423925 1.317887203 1.30717468 1.15716229 1 13.84289964 -10.55127362 8.10825254 0.999999996 1.275667332 0.524587327 0.07774756 5.50E-09 5.84E-10 0.079477774 0.019276192 2.81E-11 10.55127362 0.275667335 DFQDYMEPEEGCQGS(ph)PQRR ddPTM_A459_MK2206_30min_R2 6 DFQDYMEPEEGCQGSPQRR 19 1 O43237-2;O43237;H3BUM4;B4E2E0 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 DFQDY(0.001)MEPEEGCQGS(0.999)PQRR;DFQDY(0.037)MEPEEGCQGS(0.963)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR 150.48 1.35E-05 322485000 215061 300536 269601 333162 315857 311273 305121 250913 275484 274444 TRUE FALSE 231526.2355 285611.8193 278589.3628 305941.5989 303454.8671 323118.7121 265058.2462 283708.1906 299445.1004 265488.9148 0.872074963 1.075795649 1.049344614 1.15237052 1.143003908 1.217070447 0.998377828 1.068625373 1.127900578 1 18.0182921 -4.273070498 1.54943469 1.103030818 0.304599104 0.499849752 0.06587368 3.856357342 2.948249108 0.018632717 6.934881645 5.33E-05 4.273070498 -0.798431715 DFQESS(ph)PQK ddPTM_A459_MK2206_30min_R2 1 DFQESSPQK 9 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 DFQES(0.003)S(0.997)PQK 132.03 0.0034615 8949200 228230 135450 173070 163490 133150 115700 190940 175250 99114 204480 TRUE FALSE 245703.4643 128723.75 178840.0674 150132.344 127921.862 120103.0446 165869.3486 198155.7767 107734.7566 197807.8343 1.242132118 0.650751526 0.904110133 0.758980778 0.646697652 0.607170312 0.838537812 1.001758992 0.544643527 1 17.59374004 -3.36099669 9.667237487 0.805343034 0.90985173 0 0.208941406 0 0 0.045482172 0 0.000435515 3.36099669 0.104508696 DFQEYVEPGEDFPAS(ph)PQR ddPTM_A459_MK2206_30min_R1 7 DFQEYVEPGEDFPASPQR 18 0 Q9Y6G9;E9PHI6;C9JGM7 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 DFQEYVEPGEDFPAS(1)PQR;DFQEY(0.012)VEPGEDFPAS(0.988)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR 180.08 1.42E-09 228096100 11369.34 11916.24 11168.36 8928.15 10977.91 10619.79 12846.8 9477.25 12755.84 13630.52 TRUE FALSE 10402.31793 11140.49061 10410.28284 9615.79766 10540.6366 11221.07333 11989.81341 9394.391402 14081.85522 15319.17172 0.679039188 0.727225389 0.679559119 0.627696969 0.68806831 0.732485642 0.782667211 0.613244082 0.919230848 1 13.90305068 -8.407483877 4.471719575 0.996523917 0.694809614 0.838336896 0.0476193 0.079071914 2.35837351 0.046514561 0.012172425 3.91E-09 8.407483877 -0.301714302 DFQEYVEPGEDFPAS(ph)PQR ddPTM_A459_MK2206_30min_R2 8 DFQEYVEPGEDFPASPQR 18 0 Q9Y6G9;E9PHI6;C9JGM7 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR 252.44 3.83E-33 118145300 235134.8 211498.4 201718.9 224507.5 196522.8 204881.4 228395.7 180836.8 174003.2 227489.7 TRUE FALSE 253136.9011 200995.697 208444.1074 206164.5191 188806.3274 212678.3052 198407.0702 204472.7907 189137.6838 220066.7297 1.15027338 0.913339773 0.947185918 0.936827295 0.857950348 0.966426436 0.901576856 0.929139952 0.859456057 1 17.74758153 -4.760264247 24.99900214 0.921087947 1.150273654 0.725300105 0.0418353 14.21074678 302181.5825 0.00965644 0.057874876 1.74E-05 4.760264247 0.229185707 DFQEYVEPGEDFPAS(ph)PQRR ddPTM_A459_MK2206_30min_R1 6 DFQEYVEPGEDFPASPQRR 19 1 Q9Y6G9;E9PHI6;C9JGM7 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR 204.71 1.09E-15 915588500 18899.2 19301.2 18957.7 17306.9 19775.5 15972.6 18622.9 18343.2 14572.8 12936.8 TRUE FALSE 17291.7238 18044.68837 17670.90414 18639.88044 18987.79996 16876.95481 17380.60032 18182.82734 16087.69471 14539.50845 1.189292186 1.241079671 1.215371496 1.28201586 1.30594511 1.160765157 1.195404946 1.250580609 1.106481334 1 13.82769088 -8.491030758 2.863540441 1.000545116 1.230897069 0.761837901 0.041574053 0.11753079 2.209740384 0.04205056 0.01128681 3.23E-09 8.491030758 0.230351953 DFQEYVEPGEDFPAS(ph)PQRR ddPTM_A459_MK2206_30min_R2 7 DFQEYVEPGEDFPASPQRR 19 1 Q9Y6G9;E9PHI6;C9JGM7 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR 193.51 1.63E-15 597118600 732542.4 957236.5 967195.3 1044782.3 1017118.5 1012216.9 1029642.6 695410.4 957326.6 998462.3 TRUE FALSE 788626.4094 909701.5274 999441.1086 959420.244 977181.3171 1050737.523 894449.2898 786302.927 1040593.137 965882.5569 0.816482712 0.941834513 1.034743926 0.993309422 1.011697861 1.087852261 0.926043527 0.814077158 1.077349549 1 19.88148825 -4.816103301 3.276861309 0.98826805 0.799445461 0.339222394 0.0742312 0.368047967 6.353965047 0.019622971 0.169643535 1.53E-05 4.816103301 -0.188822589 DFQHLIS(ph)SPLK ddPTM_A459_MK2206_30min_R2 2 DFQHLISSPLK 11 0 Q15361 Q15361 TTF1 Transcription termination factor 1 1 DFQHLIS(0.651)S(0.349)PLK;DFQHLIS(0.969)S(0.031)PLK 91.845 0.017096 3591000 69435 57181 59129 67960 51479 46513 72678 54440 44869 71911 TRUE FALSE 74750.99699 54341.47469 61100.33135 62407.45061 49457.6758 48283.08481 63135.2913 61555.49492 48771.62452 69564.54996 1.074555891 0.781166193 0.87832569 0.89711571 0.710960911 0.694076003 0.90757852 0.884868729 0.701098829 1 16.08606468 -4.755593679 24.99722961 0.823078036 1.074556298 0.359756019 0.098306156 210.4835092 899973.6459 0.024153507 0.211055667 1.76E-05 4.755593679 0.251478262 DFQHLISS(ph)PLKK ddPTM_A459_MK2206_30min_R1 1 DFQHLISSPLKK 12 1 Q15361 Q15361 TTF1 Transcription termination factor 1 1 DFQHLIS(0.161)S(0.839)PLKK 68.329 0.035735 18297000 3049.7 2771.1 2705.7 2343.8 2435.3 1908.1 2701.5 2880.7 2482.3 3094.7 TRUE FALSE 2790.307 2590.700886 2522.044623 2524.319882 2338.296844 2016.134973 2521.287864 2855.514344 2740.343968 3478.0948 0.802251566 0.744862068 0.72512245 0.725776618 0.672292441 0.579666481 0.724904872 0.820999572 0.787886508 1 11.76408154 -8.665623585 1.059433972 0.996500452 0.709856157 0.668813808 0.059783941 0.448737831 1.045591363 0.062538169 0.020108601 2.16E-09 8.665623585 -0.286644295 DFQHLISS(ph)PLKK ddPTM_A459_MK2206_30min_R2 1 DFQHLISSPLKK 12 1 Q15361 Q15361 TTF1 Transcription termination factor 1 1 DFQHLIS(0.022)S(0.978)PLKK 88.108 0.01417 8947600 41191 54184 44689 38741 45369 35658 53181 35735 35826 53906 TRUE FALSE 44344.61463 51493.30135 46178.90896 35575.73637 43587.5851 37014.99018 46198.27082 40405.6872 38942.08072 52147.05163 0.850376258 0.987463332 0.885551676 0.682219517 0.835859051 0.709819424 0.885922969 0.77484126 0.746774353 1 15.67029807 -5.538217506 24.63367902 0.795404731 0.923316748 0.209057048 0.091677661 231.2763676 371422.6788 0.022966949 0.039798234 2.90E-06 5.538217506 0.127912017 DFS(ph)PLQTQTFNR ddPTM_A459_MK2206_30min_R2 1 DFSPLQTQTFNR 12 0 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 DFS(0.714)PLQT(0.286)QTFNR 97.631 0.016025 7271600 27705 39204 35083 44699 45931 41800 50048 35818 35080 40558 TRUE FALSE 29826.1161 37257.18637 36252.64971 41046.94871 44127.51816 43390.72829 43476.63748 40499.53558 38131.19499 39234.59578 0.760199398 0.949600362 0.923997023 1.046192726 1.124709387 1.1059303 1.108119929 1.032240419 0.971876841 1 15.25983872 -4.673194994 0.932593172 1.063053053 0.571543617 0.719667193 0.055073567 1.386247336 0.831593346 0.020191928 0.72642932 2.12E-05 4.673194994 -0.491509436 DFSASYFSGEQEVT(ph)PSR ddPTM_A459_MK2206_30min_R1 2 DFSASYFSGEQEVTPSR 17 0 P49454 P49454 CENPF Centromere protein F 1 DFSASYFS(0.002)GEQEVT(0.997)PS(0.001)R;DFSASYFSGEQEVT(0.893)PS(0.107)R 239.7 3.51E-22 22765000 3663.7 3662.8 3225.2 2641.3 3349.8 2994.6 3414.4 2881.2 2613.4 2803.1 TRUE FALSE 3352.083076 3424.351054 3006.28241 2844.733384 3216.370373 3164.151664 3186.631606 2856.009972 2885.072282 3150.36919 1.06402865 1.086968177 0.954263525 0.90298413 1.020950301 1.004374876 1.011510529 0.90656358 0.915788629 1 11.62130519 -5.26193917 24.99165584 0.964131788 1.075498421 0.520655361 0.042579119 35.11976938 1756272.966 0.011895719 0.027481751 5.47E-06 5.26193917 0.111366633 DFSASYFSGEQEVT(ph)PSR ddPTM_A459_MK2206_30min_R2 1 DFSASYFSGEQEVTPSR 17 0 P49454 P49454 CENPF Centromere protein F 1 DFSASYFSGEQEVT(0.656)PS(0.344)R 152.32 0.0004105 3770600 20793 22387 22369 25853 25544 22160 24498 17992 18603 24021 TRUE FALSE 22384.92807 21275.29413 23114.7713 23740.7272 24541.01421 23003.31433 21281.38317 20343.61618 20221.05531 23237.19674 0.963323086 0.915570599 0.994731488 1.021669157 1.056109069 0.989934999 0.915832637 0.87547635 0.87020201 1 14.50414842 -7.291278258 4.810963897 0.903694323 0.991699555 0.362116884 0.047844152 0.211426661 12.87741926 0.02150473 0.014738391 5.11E-08 7.291278258 0.088005232 DFSASYFSGEQEVTPS(ph)R ddPTM_A459_MK2206_30min_R2 1 DFSASYFSGEQEVTPSR 17 0 P49454 P49454 CENPF Centromere protein F 1 DFSASYFSGEQEVT(0.277)PS(0.723)R 160.09 2.78E-05 3832800 12634 8682.4 8132.2 13344 7842 11558 11466 8263.7 8546.6 12485 TRUE FALSE 13601.26875 8251.244641 8403.323489 12253.75251 7534.083677 11997.84779 9960.500427 9343.793964 9289.967819 12077.61547 1.126155141 0.68318491 0.695776704 1.01458376 0.623805559 0.993395411 0.82470753 0.773645591 0.769188905 1 13.56004803 -9.792859426 15.43805398 1 0.827130294 0.093248653 0.154187362 0 0 0.140022135 0.033960356 1.61E-10 9.792859426 -0.172869706 DFSNSPLHR ddPTM_A459_MK2206_30min_R2 2 DFSNSPLHR 9 0 O95758-1;O95758-6;O95758-2;O95758;O95758-5;O95758-4;O95758-7 O95758-1 PTBP3 Polypyrimidine tract-binding protein 3 0 ; 109.44 0.01606 2922500 14841.3 30945 20167.4 43667 37163 53576 33668 24357 35515 20424.2 FALSE TRUE 15977.56134 29408.3163 20839.77105 40099.26642 35703.79389 55614.87222 29247.35116 27540.54353 38604.0305 19757.76003 0.80867271 1.488443845 1.054763851 2.029545169 1.807077009 2.814836912 1.480296912 1.393910215 1.953866757 1 14.27013177 -5.756299171 24.99194621 1.830613349 1.154408365 0.286288691 0.476277998 162.174282 788487.6389 0.130629871 0.217723259 1.75E-06 5.756299171 -0.676204984 DFT(ph)PVCTTELGR ddPTM_A459_MK2206_30min_R1 3 DFTPVCTTELGR 12 0 P30041 P30041 PRDX6 Peroxiredoxin-6 1 DFT(0.984)PVCT(0.008)T(0.008)ELGR;DFT(0.991)PVCT(0.009)TELGR;DFT(0.977)PVCT(0.023)T(0.001)ELGR 139.86 0.0026263 18963900 5188.5 6127 6485.3 4930.1 3839.4 3822.7 4424.3 4362.9 5087.7 5330 TRUE FALSE 4747.190829 5728.131186 6045.095905 5309.817156 3686.468568 4039.13797 4129.16302 4324.755625 5616.584622 5990.320639 0.792476916 0.956231149 1.009143962 0.886399489 0.615404215 0.674277424 0.689305843 0.721957285 0.937610014 1 12.54841751 -6.023230795 22.57919029 0.750136687 0.927110896 0.221476904 0.123159889 267.5727788 260068.1875 0.035960629 0.046842632 9.48E-07 6.023230795 0.176974209 DFTNEAPPAPLPDAS(ph)ASPLSPHR ddPTM_A459_MK2206_30min_R1 1 DFTNEAPPAPLPDASASPLSPHR 23 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.672)AS(0.301)PLS(0.027)PHR 111.09 9.89E-06 80097000 2382.5 1646.3 1601.6 1282.6 2459.6 2229.9 2910.3 2136.6 2191.7 2214 TRUE FALSE 2179.855864 1539.125571 1492.887854 1381.386074 2361.628924 2356.155011 2716.159197 2117.919931 2419.535058 2488.287035 0.876046788 0.618548242 0.599966095 0.555155436 0.949098271 0.9468984 1.091577925 0.851155796 0.972369756 1 11.2809372 -6.276894816 22.15155744 0.966146758 0.65483318 0.704950561 0.096953562 98.74100807 141520.2648 0.0303778 0.034625078 5.29E-07 6.276894816 -0.311313579 DFTNEAPPAPLPDAS(ph)ASPLSPHR ddPTM_A459_MK2206_30min_R2 3 DFTNEAPPAPLPDASASPLSPHR 23 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.621)AS(0.359)PLS(0.021)PHR;DFTNEAPPAPLPDAS(0.333)AS(0.333)PLS(0.333)PHR;DFTNEAPPAPLPDAS(0.446)AS(0.446)PLS(0.107)PHR 172.34 8.34E-13 172605000 306225 301210 300123 331741 295559 299623 339579 287260 236724 350230 TRUE FALSE 329669.8214 286252.3494 310128.951 304636.6991 283953.8686 311025.3632 294991.8694 324805.8683 257313.8256 338802.0238 0.973045609 0.84489563 0.91536924 0.89915844 0.838111489 0.918015069 0.87069099 0.95868928 0.759481371 1 18.37008297 -10.26912651 4.875900252 1.000000073 0.887567691 0.248174211 0.059293185 20336949.13 42458094.4 28.98076447 0.013469511 5.38E-11 10.26912651 -0.112432382 DFTNEAPPAPLPDAS(ph)ASPLSPHRR ddPTM_A459_MK2206_30min_R1 1 DFTNEAPPAPLPDASASPLSPHRR 24 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.483)AS(0.259)PLS(0.259)PHRR 157.17 7.29E-13 143820000 3774.8 3612.6 3381.9 3254.4 3935.1 3437.3 3703.3 3446.4 3229 2751.1 TRUE FALSE 3453.733438 3377.419083 3152.346051 3505.054452 3778.356634 3631.916956 3456.259614 3416.268488 3564.666105 3091.927038 1.117016474 1.092334664 1.019540892 1.133614865 1.222007049 1.174645104 1.117833497 1.104899452 1.152894639 1 11.59429056 -5.95996665 24.35557437 1.139538158 1.077680399 0.131795145 0.058733396 197.6997352 120275.2644 0.016429993 0.02436958 1.10E-06 5.95996665 -0.061857759 DFTNEAPPAPLPDAS(ph)ASPLSPHRR ddPTM_A459_MK2206_30min_R2 2 DFTNEAPPAPLPDASASPLSPHRR 24 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.793)AS(0.192)PLS(0.015)PHRR;DFTNEAPPAPLPDAS(0.572)AS(0.231)PLS(0.196)PHRR 114.68 7.77E-08 163095600 20489.3 21876.8 23931 28447 21714 19789 25625 21189 19458.4 23885 TRUE FALSE 22057.97656 20790.42992 24728.8476 26122.7891 20861.39926 20542.08426 22260.40672 23958.47505 21150.85646 23105.63441 0.954657906 0.899799138 1.070251834 1.130580907 0.902870654 0.889050865 0.963418979 1.036910506 0.915398214 1 14.49595708 DFTNEAPPAPLPDASAS(ph)PLSPHR ddPTM_A459_MK2206_30min_R1 1 DFTNEAPPAPLPDASASPLSPHR 23 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.124)AS(0.607)PLS(0.269)PHR 204.29 1.66E-23 70802000 8337.3 8555.2 8451.3 6119.5 8753.6 8241.8 9147.2 8447.6 8450.8 8744 TRUE FALSE 7628.168854 7998.254925 7877.649303 6590.82495 8404.925576 8708.443594 8537.006978 8373.743524 9329.290901 9827.272734 0.776224397 0.813883479 0.801610937 0.670666738 0.855265322 0.886150596 0.868705612 0.85209231 0.949326548 1 13.26257538 -7.808654622 0.474778629 1.000795756 0.767376513 0.681110003 0.048981574 0.590712938 0.325800794 0.05560709 0.03920662 1.55E-08 7.808654622 -0.233419243 DFTNEAPPAPLPDASAS(ph)PLSPHR ddPTM_A459_MK2206_30min_R2 1 DFTNEAPPAPLPDASASPLSPHR 23 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.238)AS(0.737)PLS(0.025)PHR 158.99 9.42E-10 8137300 41276 47621 44304 63873 42215 51989 59860 56188 49162 48764 TRUE FALSE 44436.1223 45256.21039 45781.07325 58654.37158 40557.42699 53967.47783 52000.3101 63531.96452 53438.0219 47172.83467 0.941985416 0.959370169 0.970496549 1.243392982 0.859762346 1.144037203 1.10233592 1.346791325 1.132813456 1 15.52566868 -6.967844184 24.267036 1.167070506 1.005103933 0.26381336 0.122782443 180.7724776 136422.7896 0.042665752 0.037627336 1.08E-07 6.967844184 -0.161966573 DFTNEAPPAPLPDASASPLS(ph)PHR ddPTM_A459_MK2206_30min_R1 1 DFTNEAPPAPLPDASASPLSPHR 23 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.023)AS(0.108)PLS(0.869)PHR 169.14 1.71E-12 91365000 6804 6652.2 6379.2 5082.5 5902.5 6334.2 7053.5 5557.3 5982.7 6320.3 TRUE FALSE 6225.284071 6219.140571 5946.197677 5473.955031 5667.390926 6692.83693 6582.973885 5508.713112 6604.623074 7103.30648 0.876392436 0.875527557 0.837102791 0.770620703 0.797852513 0.942214298 0.926747833 0.775513928 0.929795595 1 12.79427502 -6.757676865 24.99740427 0.901567295 0.830874392 0.30544221 0.061226691 151.0580423 1003601.066 0.021367017 0.020594526 1.75E-07 6.757676865 -0.070692903 DFTNEAPPAPLPDASASPLS(ph)PHR ddPTM_A459_MK2206_30min_R2 2 DFTNEAPPAPLPDASASPLSPHR 23 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.019)AS(0.412)PLS(0.569)PHR;DFTNEAPPAPLPDAS(0.029)AS(0.05)PLS(0.921)PHR 133.56 4.29E-06 35627700 172790 202794 166510 216501 186281 209263 212188 160902 179678 211010 TRUE FALSE 186018.9353 192723.5449 172061.3603 198812.1757 178966.672 217226.6501 184327.4607 181932.4439 195306.0677 204124.761 0.911300199 0.944145845 0.842922532 0.973973832 0.87675141 1.064185692 0.903013725 0.891280622 0.956797533 1 17.63909167 -5.798749534 24.99993191 0.947218318 0.903924744 0.146625884 0.057198754 370.8838642 248511.823 0.015868164 0.023536977 1.59E-06 5.798749534 -0.043293574 DFTNEAPPAPLPDASASPLS(ph)PHRR ddPTM_A459_MK2206_30min_R1 2 DFTNEAPPAPLPDASASPLSPHRR 24 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.002)AS(0.003)PLS(0.995)PHRR;DFTNEAPPAPLPDAS(0.09)AS(0.171)PLS(0.74)PHRR 172.34 1.83E-16 146077400 6991.2 5738.6 6287.1 5843.3 7045.7 5652.7 6701.5 5914.2 5704.4 5618.5 TRUE FALSE 6396.561728 5365.016097 5860.349169 6293.351978 6765.054849 5972.750989 6254.455163 5862.492773 6297.392793 6314.562198 1.012985782 0.84962598 0.92806896 0.996641063 1.071341866 0.945869373 0.990481203 0.92840843 0.997280983 1 12.624467 -5.733282451 7.533564526 0.988603681 0.921757529 0.217980742 0.051113938 0.26835826 54.04117032 0.013881685 0.023608741 1.85E-06 5.733282451 -0.066846152 DFTNEAPPAPLPDASASPLS(ph)PHRR ddPTM_A459_MK2206_30min_R2 3 DFTNEAPPAPLPDASASPLSPHRR 24 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.153)AS(0.153)PLS(0.693)PHRR;DFTNEAPPAPLPDAS(0.124)AS(0.397)PLS(0.479)PHRR;DFTNEAPPAPLPDAS(0.012)AS(0.036)PLS(0.952)PHRR 114.73 7.77E-08 298993000 84408 104413 96034 120575 101882 103306 104364 89733 93786 109366 TRUE FALSE 90870.34138 99228.00225 99235.72563 110723.6368 97881.60076 107237.3822 90660.88144 101461.4112 101943.3368 105797.3964 0.858909052 0.9379059 0.937978901 1.046562965 0.925179675 1.013610787 0.85692923 0.959016145 0.963571319 1 16.6909446 -4.690314498 2.010099956 0.960836791 0.812262959 0.287482674 0.049221488 1.34545387 4.870545939 0.01294465 0.402494096 2.04E-05 4.690314498 -0.148573832 DFTPVCTTELGR ddPTM_A459_MK2206_30min_R2 1 DFTPVCTTELGR 12 0 P30041 P30041 PRDX6 Peroxiredoxin-6 0 149.33 0.0080185 5973700 3336.2 6389 8212.6 6616.6 8743.3 8499.5 7586 6035.2 6018.7 10836 FALSE TRUE 3591.622037 6071.73155 8486.403985 6076.002615 8399.99411 8822.954428 6589.949088 6824.021362 6542.195647 10482.42221 0.342632835 0.579229822 0.809584256 0.579637272 0.801340944 0.841690427 0.628666634 0.650996614 0.624111061 1 13.3556845 -4.87245913 2.79125315 0.725288462 0.308997524 0.501900257 0.122316519 0.293240775 3.622301684 0.030544638 0.257340309 1.34E-05 4.87245913 -0.416290938 DFTVSAMHGDMDQK ddPTM_A459_MK2206_30min_R1 4 DFTVSAMHGDMDQK 14 0 P60842;P60842-2;J3KT12;J3KSZ0;J3QL52 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 ;;; 227.56 7.58E-12 112710000 32048.5 21912.7 27982.6 21002.5 33034.6 32250.8 32705.1 28723.4 22024.5 20230.7 FALSE TRUE 29322.60678 20486.17925 26083.21908 22620.11619 31718.76193 34076.81243 30523.40245 28472.27434 24314.02559 22737.03185 1.289640925 0.901004994 1.147169043 0.994857919 1.395026499 1.498736187 1.342453257 1.252242356 1.069357942 1 14.47275631 -6.257055089 24.99840733 1.288344027 1.074728046 0.199463138 0.167023512 525.8548774 2998325.278 0.050094565 0.062449647 5.53E-07 6.257055089 -0.213615981 DFTVSAMHGDMDQK ddPTM_A459_MK2206_30min_R2 2 DFTVSAMHGDMDQK 14 0 P60842;P60842-2;J3KT12;J3KSZ0;J3QL52 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 ; 148.48 0.00064443 23009000 125520 200073 156180 218850 234626 224348 259430 186912 202562 215909 FALSE TRUE 135129.9077 190137.6658 161386.9632 200969.2549 225413.4043 232885.7203 225366.5294 211342.0402 220180.4766 208863.907 0.646975869 0.910342378 0.772689574 0.962201932 1.079235793 1.115011797 1.079011365 1.011864822 1.054181547 1 17.67220368 -5.91505714 2.833127406 1.060661002 0.786492288 0.772427071 0.067634694 0.121268775 1.96838749 0.019714232 0.031251122 1.22E-06 5.91505714 -0.274168714 DFVDDDDDDDLER ddPTM_A459_MK2206_30min_R2 2 DFVDDDDDDDLER 13 0 G3V4K3;Q9H9C1-2;Q9H9C1 G3V4K3 VIPAS39 Spermatogenesis-defective protein 39 homolog 0 ; 231.7 4.51E-12 18172200 81750 89291 75544 90300 95701 86987 87817 65879 72452 85766 FALSE TRUE 88008.84286 84856.93878 78062.59926 82922.20114 91943.29788 90297.35124 76286.52241 74489.6115 78753.744 82967.46244 1.060763343 1.022773703 0.940882087 0.999454469 1.108185006 1.088346547 0.919475179 0.89781716 0.949212398 1 16.34025804 -7.276931385 24.65135234 0.933110938 1.033295943 0.457108028 0.050353426 672.2866366 1069758.862 0.023049852 0.015607834 5.29E-08 7.276931385 0.100185005 DFVT(ph)ISPVQPEER ddPTM_A459_MK2206_30min_R2 1 DFVTISPVQPEER 13 0 Q9H611-2;Q9H611-4;Q9H611;Q9H611-3 Q9H611-2 PIF1 ATP-dependent DNA helicase PIF1 1 DFVT(0.601)IS(0.399)PVQPEER 145.7 0.0014503 1738700 14052 16491 19386 18177 21514 18824 19225 15874 17356 15945 TRUE FALSE 15127.83192 15672.08092 20032.31956 16691.88095 20669.25226 19540.36051 16700.73441 17948.7863 18865.59351 15424.71596 0.980752707 1.016036922 1.298715621 1.082151594 1.340008615 1.266821416 1.082725572 1.163638044 1.223075586 1 13.9129563 -5.135618797 6.504019936 1.189224971 0.990199288 0.347572317 0.100691442 0.233928732 11.20918576 0.024785755 0.067516688 7.32E-06 5.135618797 -0.199025683 DGAEQQGPEATVEEAEAAAFGSEKPQSMFEPPQVSS(ph)PVQEK ddPTM_A459_MK2206_30min_R1 1 DGAEQQGPEATVEEAEAAAFGSEKPQSMFEPPQVSSPVQEK 41 1 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 DGAEQQGPEATVEEAEAAAFGSEKPQSMFEPPQVS(0.396)S(0.604)PVQEK 109.63 7.38E-23 6994700 653.19 466.67 578.67 518.88 675.51 377.92 559.88 528.23 791.13 688.17 TRUE FALSE 597.6327605 436.2896982 539.3914927 558.8442275 648.6030063 399.3175038 522.5314268 523.6117408 873.3707946 773.425695 0.772708696 0.564100341 0.697405706 0.7225571 0.838610626 0.516297178 0.6756065 0.677003291 1.129223919 1 9.595118885 -8.255824929 24.91323264 1.064611978 0.680248181 0.733856408 0.091904181 192.3316245 853451.1633 0.065102491 0.023060677 5.55E-09 8.255824929 -0.384363797 DGAGLGLS(ph)GGSPGASTPVLLTR ddPTM_A459_MK2206_30min_R1 1 DGAGLGLSGGSPGASTPVLLTR 22 0 Q8N612;Q8N612-2 Q8N612 FAM160A2 FTS and Hook-interacting protein 1 DGAGLGLS(0.797)GGS(0.202)PGAS(0.001)TPVLLTR 130.17 2.47E-05 2954300 784.91 820.16 810.49 840.36 951.68 977.06 874.1 811.07 805.9 814.39 TRUE FALSE 718.1492828 766.7674349 755.476197 905.0846728 913.7725704 1032.380293 815.7903839 803.9789005 889.6761889 915.2827815 0.784620117 0.837738293 0.825401955 0.988857969 0.998350006 1.127935884 0.891298733 0.878393997 0.972023299 1 9.83807373 -5.752712866 11.69688686 0.977784734 0.81802598 0.569170842 0.065218678 0.270062721 346.9457092 0.019598703 0.032436601 1.77E-06 5.752712866 -0.159758754 DGAGLGLS(ph)GGSPGASTPVLLTR ddPTM_A459_MK2206_30min_R2 2 DGAGLGLSGGSPGASTPVLLTR 22 0 Q8N612;Q8N612-2 Q8N612 FAM160A2 FTS and Hook-interacting protein 1 DGAGLGLS(0.915)GGS(0.044)PGAS(0.041)TPVLLTR;DGAGLGLS(0.999)GGS(0.001)PGASTPVLLTR 230.62 1.54E-30 5960600 20272.9 22418.8 21420.9 29645 28742 30547 25056 19426.6 25534 24160 TRUE FALSE 21825.00881 21305.51499 22135.06211 27222.90867 27613.44466 31709.48749 21766.1171 21965.72332 27754.90117 23371.66118 0.933823601 0.911596092 0.947089809 1.164782788 1.181492597 1.356749409 0.93130381 0.939844333 1.187545077 1 14.51247266 -5.697377013 6.647204785 1.11209891 0.926152462 0.309304345 0.121903279 0.275622447 22.3333115 0.03574546 0.061978112 2.01E-06 5.697377013 -0.185946448 DGAGLGLSGGSPGAS(ph)TPVLLTR ddPTM_A459_MK2206_30min_R2 1 DGAGLGLSGGSPGASTPVLLTR 22 0 Q8N612;Q8N612-2 Q8N612 FAM160A2 FTS and Hook-interacting protein 1 DGAGLGLS(0.009)GGS(0.002)PGAS(0.581)T(0.408)PVLLTR 161.59 2.84E-12 0 4345.6 6694 10400 7959.9 8750.8 10467 9494.4 7708.8 9804.4 8932.1 TRUE FALSE 4678.302477 6361.585694 10746.73081 7309.550708 8407.199623 10865.32902 8247.773875 8716.366628 10657.16899 8640.646309 0.541429693 0.736239567 1.243741547 0.845949533 0.972982729 1.257467165 0.954532055 1.00876327 1.233376371 1 13.07692351 -5.05975429 4.595258178 1.05594688 0.576454259 0.633702753 0.132929495 0.117240921 4.996702903 0.033530848 0.105367445 8.71E-06 5.05975429 -0.479492621 DGAPVAT(ph)NAFHSPR ddPTM_A459_MK2206_30min_R1 2 DGAPVATNAFHSPR 14 0 Q96S52-2;Q96S52 Q96S52-2 PIGS GPI transamidase component PIG-S 1 DGAPVAT(0.911)NAFHS(0.089)PR;DGAPVAT(0.864)NAFHS(0.136)PR 104.9 0.014056 9643400 3677.5 3535.9 3747.5 3081.6 3674.6 3248.7 3423.8 3206.5 3070 3198.1 TRUE FALSE 3364.709314 3305.712267 3493.130141 3318.945366 3528.232901 3432.638587 3195.404549 3178.465909 3389.137486 3594.304772 0.936122429 0.919708393 0.971851404 0.923390078 0.981617621 0.95502157 0.889018809 0.884306176 0.942918784 1 11.81149703 -7.220909042 24.73001454 0.91941975 0.948168276 0.037310629 0.035352944 927.1431518 565706.6793 0.013114251 0.010158002 6.01E-08 7.220909042 0.028748526 DGASSS(ph)PESASR ddPTM_A459_MK2206_30min_R1 1 DGASSSPESASR 12 0 A0A075B6E4;A0A0A6YYI5;G5E9M7;Q14135-2;Q14135;Q14135-4;G5E9M9;Q14135-5;Q14135-6 A0A075B6E4 VGLL4 Transcription cofactor vestigial-like protein 4 1 DGASS(0.182)S(0.818)PESASR 223.22 1.64E-08 4772400 1888.9 1726.1 1905.8 1600.9 1360 1438.8 2235.1 1864.6 651.16 1412.3 TRUE FALSE 1728.239136 1613.730576 1776.439606 1724.201595 1305.82832 1520.263613 2086.000557 1848.297999 718.8504122 1587.266386 1.088814802 1.016672809 1.119181771 1.086271095 0.822690086 0.957787316 1.314209496 1.164453563 0.452885803 1 10.63232856 -8.241511774 24.9961828 0.72644281 1.067568521 0.389539051 0.172614711 715.1380276 897036.358 0.116480054 0.043897903 5.73E-09 8.241511774 0.341125711 DGASSS(ph)PESASR ddPTM_A459_MK2206_30min_R2 1 DGASSSPESASR 12 0 A0A075B6E4;A0A0A6YYI5;G5E9M7;Q14135-2;Q14135;Q14135-4;G5E9M9;Q14135-5;Q14135-6 A0A075B6E4 VGLL4 Transcription cofactor vestigial-like protein 4 1 DGAS(0.026)S(0.3)S(0.674)PESASR 172.33 0.00022903 30037000 17079 19752 18256 21816 16735 17544 17828 17470 17710 18375 TRUE FALSE 18386.58137 18771.1444 18864.64593 20033.56301 16077.89981 18211.64921 15487.16218 19753.38898 19250.38379 17775.42525 1.034382081 1.056016615 1.061276772 1.12703706 0.904501557 1.024540845 0.871268167 1.111275185 1.082977398 1 14.11759645 -6.240942872 24.80547897 0.999538666 1.068102201 0.191728758 0.070965335 1387.6606 1679387.849 0.021581487 0.027827918 5.74E-07 6.240942872 0.068563535 DGDGVPGGGPLS(ph)PAR ddPTM_A459_MK2206_30min_R1 2 DGDGVPGGGPLSPAR 15 0 M0QZR4;Q92888-2;Q92888;Q92888-3 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 DGDGVPGGGPLS(1)PAR;DGDGVPGGGPLS(1)PAR 184.87 2.10E-05 73461000 8275.3 8204.3 7997.2 7041.4 7267.3 6576.6 7738 6984.9 6694.7 5725.5 TRUE FALSE 7571.44228 7670.198579 7454.372345 7583.729848 6977.828052 6948.961409 7221.812139 6923.831756 7390.638022 6434.818165 1.176636555 1.191983733 1.158443355 1.178546099 1.084386205 1.079900198 1.122302442 1.075994935 1.148538752 1 12.65168367 -1.522878751 0.050252917 0.778198836 1.762599318 0.680035626 0.032641438 286.8276129 1.091920792 5.025743716 21.88348821 0.03 1.522878751 0.984400482 DGDGVPGGGPLS(ph)PAR ddPTM_A459_MK2206_30min_R2 2 DGDGVPGGGPLSPAR 15 0 M0QZR4;Q92888-2;Q92888;Q92888-3 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 DGDGVPGGGPLS(1)PAR;DGDGVPGGGPLS(1)PAR 106.6 0.0044444 55825600 56993 69414 70564 70862 57655 51986 62843 49489 53306 53637 TRUE FALSE 61356.4279 65967.0017 72916.56854 65072.34792 55391.17501 53964.36366 54591.63861 55957.38222 57942.45952 51886.82908 1.182504867 1.271363135 1.405300147 1.254120729 1.067538256 1.040039729 1.05212902 1.078450605 1.116708432 1 15.66308075 -6.227942866 4.373891255 1.060710723 1.290583346 0.777353013 0.057578091 0.099815338 4.53836481 0.018204596 0.023066969 5.92E-07 6.227942866 0.229872623 DGDKS(ph)PMSSLQISNEK ddPTM_A459_MK2206_30min_R1 3 DGDKSPMSSLQISNEK 16 1 Q9UER7-3;Q9UER7;Q9UER7-2;Q9UER7-5;Q9UER7-4 Q9UER7-3 DAXX Death domain-associated protein 6 1 DGDKS(0.998)PMS(0.002)SLQISNEK;DGDKS(0.977)PMS(0.01)S(0.013)LQISNEK;DGDKS(1)PMSSLQISNEK 195.46 5.98E-06 52934300 5586.79 7462.7 6064.29 5008.31 4096.05 3863.27 4812.87 5893.68 6919.2 6454 TRUE FALSE 5111.604173 6976.876874 5652.662891 5394.050904 3932.895655 4082.005009 4491.812224 5842.152177 7638.475601 7253.570245 0.704701823 0.961854182 0.779293879 0.743640817 0.54220136 0.562758045 0.619255356 0.805417467 1.053064262 1 12.82447556 -8.123279586 3.72704223 1.02485305 0.705175545 0.557237843 0.113933199 0.208222107 4.934468786 0.101069103 0.034289233 7.53E-09 8.123279586 -0.319677505 DGDKS(ph)PMSSLQISNEK ddPTM_A459_MK2206_30min_R2 1 DGDKSPMSSLQISNEK 16 1 Q9UER7-3;Q9UER7;Q9UER7-2;Q9UER7-5;Q9UER7-4 Q9UER7-3 DAXX Death domain-associated protein 6 1 DGDKS(0.991)PMS(0.006)S(0.003)LQISNEK 67.214 0.028077 55841000 131220 120160 141720 113570 117410 63509 143660 109590 90124 132650 TRUE FALSE 141266.3041 114193.0291 146444.8741 104290.9677 112799.8935 65925.8795 124797.2694 123913.7893 97962.82261 128321.6414 1.100876692 0.889896887 1.141232862 0.812730936 0.879040295 0.513754958 0.972534859 0.965649971 0.763416222 1 16.96940497 -5.778960776 24.99338878 0.83551504 1.028591631 0.282027096 0.145277541 311.5683105 444435.5844 0.04098446 0.060944019 1.66E-06 5.778960776 0.193076591 DGDKSPMS(ph)SLQISNEK ddPTM_A459_MK2206_30min_R2 1 DGDKSPMSSLQISNEK 16 1 Q9UER7-3;Q9UER7;Q9UER7-2;Q9UER7-5;Q9UER7-4 Q9UER7-3 DAXX Death domain-associated protein 6 1 DGDKS(0.136)PMS(0.409)S(0.409)LQIS(0.045)NEK 97.214 0.036755 14677000 55141 48867 52968 50534 53516 33223 60362 48133 37082 57501 TRUE FALSE 59362.63736 46440.33584 54733.92668 46405.21055 51414.69294 34487.32455 52436.39689 54424.14837 40307.32533 55624.74708 1.067198333 0.834886238 0.983985178 0.834254769 0.924313289 0.619999665 0.942681084 0.978416105 0.724629368 1 15.76343925 -2.918696455 1.780826153 0.867138087 143.8810822 0.190270421 0.117493128 1600.858081 9.078360695 0.03043394 932868.2003 0.001205878 2.918696455 143.0139441 DGDSYDPY(ph)DFS(ph)DTEEEMPQVHTPK ddPTM_A459_MK2206_30min_R1 1 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 DGDS(0.002)Y(0.005)DPY(0.833)DFS(0.836)DT(0.285)EEEMPQVHT(0.038)PK 70.072 0.02347 3181400 825.1 987.37 1007.1 992.42 864.51 704.64 1011.2 1205.4 1030.8 901.55 TRUE FALSE 754.9209122 923.0920335 938.7408579 1068.85636 830.0747361 744.5361079 943.744693 1194.861315 1137.955349 1013.24082 0.745055763 0.911029259 0.926473588 1.054888768 0.819227492 0.734806665 0.931412034 1.179247116 1.123084785 1 9.98476139 -7.63619637 5.402609007 1.111273031 0.873464035 0.540359091 0.09666329 0.166160479 7.187208103 0.049486243 0.027878764 2.31E-08 7.63619637 -0.237808996 DGDSYDPYDFS(ph)DT(ph)EEEMPQVHTPK ddPTM_A459_MK2206_30min_R1 1 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 DGDS(0.001)Y(0.001)DPY(0.017)DFS(0.983)DT(0.841)EEEMPQVHT(0.157)PK 77.668 0.0011195 16831000 2222.8 2228.1 2440.9 2251.4 1810.2 1650.7 1833.2 2320.8 1925 1990 TRUE FALSE 2033.739188 2083.050285 2275.218509 2424.803218 1738.095901 1744.161207 1710.910573 2300.50949 2125.110639 2236.536224 0.909325396 0.931373372 1.017295622 1.084177932 0.77713738 0.7798493 0.764982277 1.028603725 0.950179396 1 11.12705041 -4.40833423 7.811808338 0.920408197 0.822391834 0 0.10940566 27159.46538 94143.75744 0.029881409 40313.81221 3.91E-05 4.40833423 -0.098016364 DGDSYDPYDFS(ph)DT(ph)EEEMPQVHTPK ddPTM_A459_MK2206_30min_R2 1 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 DGDS(0.001)Y(0.001)DPY(0.016)DFS(0.854)DT(0.846)EEEMPQVHT(0.283)PK 58.093 0.011529 3398200 33820 33837 28889 32518 27912 22860 31354 27227 24581 32098 TRUE FALSE 36409.2852 32156.70378 29852.14484 29861.17538 26816.03463 23729.95332 27237.18214 30785.66238 26719.01095 31050.64489 1.172577424 1.035621125 0.961401766 0.961692599 0.86362247 0.764233832 0.877185715 0.991466119 0.860497779 1 14.92233561 -4.77623594 0.980486888 0.890523698 1.320081675 0.626576127 0.065993375 1.352132861 1.024134923 0.023343581 0.62031312 1.67E-05 4.77623594 0.429557977 DGDSYDPYDFS(ph)DTEEEMPQVHT(ph)PK ddPTM_A459_MK2206_30min_R1 2 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 DGDSYDPY(0.002)DFS(0.827)DT(0.355)EEEMPQVHT(0.817)PK;DGDSYDPYDFS(0.936)DT(0.081)EEEMPQVHT(0.983)PK 93.043 8.67E-05 23999200 2965.6 3595.9 3494.5 3192.8 2625.5 2419.9 3134.8 3485.3 2624.26 2653.5 TRUE FALSE 2713.360147 3361.806256 3257.303076 3438.710009 2520.920775 2556.912647 2925.683212 3454.82839 2897.061218 2982.235613 0.909840971 1.127277215 1.092235322 1.153064498 0.845312411 0.857381166 0.98103691 1.158469296 0.971439415 1 11.54217853 -6.243333992 24.87646708 0.971890234 1.076197601 0.195621453 0.10063272 1410.274445 1937690.276 0.032035429 0.041272645 5.71E-07 6.243333992 0.104307367 DGDSYDPYDFS(ph)DTEEEMPQVHT(ph)PK ddPTM_A459_MK2206_30min_R2 1 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 DGDS(0.001)YDPY(0.004)DFS(0.864)DT(0.155)EEEMPQVHT(0.976)PK 60.101 0.028185 2588400 7553.7 8470.4 8111.5 6911.5 6704.1 4532.4 7020.5 6099.6 6779 6544.6 TRUE FALSE 8132.01708 8049.772253 8381.933362 6346.808341 6440.863349 4704.883658 6098.699917 6896.838663 7368.625166 6331.050238 1.284465732 1.271475024 1.323940428 1.002489019 1.017345165 0.743144262 0.963299877 1.08936723 1.1638867 1 12.62822913 -5.76691927 24.19462066 0.98965632 1.291111895 0.638038272 0.10213089 58.54913506 258506.5941 0.031516378 0.048344771 1.71E-06 5.76691927 0.301455575 DGDSYDPYDFS(ph)DTEEEMPQVHTPK ddPTM_A459_MK2206_30min_R1 6 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 DGDSYDPY(0.001)DFS(0.921)DT(0.078)EEEMPQVHTPK;DGDSYDPYDFS(0.93)DT(0.07)EEEMPQVHTPK;DGDSYDPYDFS(0.92)DT(0.08)EEEMPQVHTPK;DGDSYDPYDFS(0.976)DT(0.024)EEEMPQVHTPK;DGDSYDPY(0.001)DFS(0.964)DT(0.036)EEEMPQVHTPK;DGDSYDPYDFS(0.783)DT(0.217)EEEMPQVHTPK 131.42 7.33E-08 112237000 26456.4 28694.9 28117.6 25891.6 27343.8 23247.1 26448.8 25514.2 25070.8 22885.4 TRUE FALSE 24206.14425 26826.85679 26209.05565 27885.77552 26254.63854 24563.33071 24684.44881 25291.13204 27676.99938 25720.61613 0.941118367 1.043009882 1.018990195 1.084179919 1.020762427 0.955005533 0.959714522 0.983301952 1.076062845 1 14.65063758 -6.550861822 24.66280841 0.991168813 1.026802357 0.073327147 0.045389067 414.9314063 365695.1377 0.015272021 0.015272352 2.81E-07 6.550861822 0.035633544 DGDSYDPYDFS(ph)DTEEEMPQVHTPK ddPTM_A459_MK2206_30min_R2 13 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 DGDS(0.001)Y(0.001)DPY(0.014)DFS(0.658)DT(0.326)EEEMPQVHT(0.001)PK;DGDSYDPYDFS(0.981)DT(0.019)EEEMPQVHTPK;DGDSYDPYDFS(0.618)DT(0.381)EEEMPQVHTPK;DGDSYDPY(0.001)DFS(0.967)DT(0.032)EEEMPQVHTPK;DGDS(0.001)Y(0.004)DPY(0.052)DFS(0.779)DT(0.164)EEEMPQVHTPK;DGDSYDPY(0.007)DFS(0.496)DT(0.496)EEEMPQVHTPK;DGDSYDPY(0.001)DFS(0.934)DT(0.065)EEEMPQVHTPK;DGDSYDPY(0.002)DFS(0.5)DT(0.498)EEEMPQVHTPK;DGDSYDPY(0.002)DFS(0.815)DT(0.183)EEEMPQVHTPK;DGDSYDPYDFS(0.969)DT(0.031)EEEMPQVHTPK;DGDS(0.001)Y(0.001)DPY(0.021)DFS(0.793)DT(0.181)EEEMPQVHT(0.003)PK;DGDSYDPY(0.001)DFS(0.851)DT(0.147)EEEMPQVHTPK;DGDSYDPY(0.001)DFS(0.858)DT(0.141)EEEMPQVHTPK 119.87 9.92E-08 183899900 794831.9 937001.7 864762.8 959824.9 943912.5 764477.5 1020994.4 743369.8 770344.9 951353 TRUE FALSE 855684.8414 890471.5581 893593.5601 881404.1353 906849.7525 793570.227 886936.6088 840530.7852 837348.1069 920310.4295 0.92977849 0.967577384 0.97096972 0.957724814 0.985373765 0.862285378 0.963736344 0.913312246 0.90985398 1 19.81176105 DGDSYDPYDFSDT(ph)EEEMPQVHT(ph)PK ddPTM_A459_MK2206_30min_R2 1 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 DGDS(0.007)Y(0.001)DPY(0.001)DFS(0.365)DT(0.652)EEEMPQVHT(0.975)PK 66.828 0.0099909 3578700 10169 10603 11538 9207.4 8182.6 8907.4 12362 9222.3 9768.5 9371.1 TRUE FALSE 10947.54646 10076.47044 11922.67116 8455.125967 7861.31001 9246.377349 10738.85455 10427.68627 10618.14647 9065.321774 1.207629109 1.111540295 1.315195584 0.932689007 0.867184884 1.019972327 1.184608205 1.150283083 1.171292838 1 13.14614251 -5.760616915 24.99999977 1.05000582 1.201463507 0.331155832 0.107019837 31.40876799 954652.5559 0.033359647 0.053739018 1.74E-06 5.760616915 0.151457687 DGDSYDPYDFSDT(ph)EEEMPQVHTPK ddPTM_A459_MK2206_30min_R1 6 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 DGDSYDPY(0.001)DFS(0.03)DT(0.969)EEEMPQVHTPK;DGDSYDPYDFS(0.406)DT(0.593)EEEMPQVHTPK;DGDSYDPYDFS(0.017)DT(0.983)EEEMPQVHTPK;DGDSYDPY(0.002)DFS(0.141)DT(0.68)EEEMPQVHT(0.178)PK;DGDSYDPYDFS(0.059)DT(0.941)EEEMPQVHTPK;DGDSYDPYDFS(0.316)DT(0.684)EEEMPQVHTPK 169.91 8.67E-16 319399300 34550.08 38338.78 37388.59 32640.14 32578.21 30090.05 33846.25 33373.36 31741.39 31119.02 TRUE FALSE 31611.41427 35842.91845 34850.75668 35154.08924 31280.55091 31793.72263 31588.42842 33081.58023 35041.02108 34974.27913 0.903847486 1.024836518 0.996468192 1.00514121 0.894387295 0.909060127 0.903190264 0.945883119 1.001908315 1 15.0940067 -4.42091611 11.86789144 0.95957639 2.11E-05 0.126865913 0.046141663 248148.1097 698827.5328 0.012589146 5980715.432 3.79E-05 4.42091611 -0.95955534 DGDSYDPYDFSDT(ph)EEEMPQVHTPK ddPTM_A459_MK2206_30min_R2 2 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 DGDS(0.001)YDPY(0.044)DFS(0.179)DT(0.776)EEEMPQVHTPK;DGDS(0.001)Y(0.002)DPY(0.01)DFS(0.413)DT(0.573)EEEMPQVHT(0.001)PK 78.419 0.0030894 0 23698.1 23449 24131.2 21359.6 28340.5 22158.1 27654.1 19313.7 22641.5 22373.3 TRUE FALSE 25512.44476 22284.55676 24935.72216 19614.45235 27227.70957 23001.34202 24023.08345 21838.0669 24610.81674 21643.26105 1.178770828 1.029630272 1.152124077 0.906261413 1.258022509 1.062748445 1.109956739 1.009000762 1.137112226 1 14.40163027 -14.52287874 0.300885786 0.250193833 1.094483513 0.081046328 0.093473712 747.3524672 6.89737096 353.6490669 0.087167979 3.00E-15 14.52287874 0.844289679 DGDSYDPYDFSDTEEEMPQVHT(ph)PK ddPTM_A459_MK2206_30min_R2 1 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 DGDSYDPYDFSDT(0.006)EEEMPQVHT(0.993)PK 80.355 0.0018959 0 5421 6168.1 6058.4 4446.6 4811.4 5149.4 5208.2 4776.4 4129.3 5061.9 TRUE FALSE 5836.035928 5861.801123 6260.384032 4083.298556 4622.480261 5345.364025 4524.357084 5400.69188 4488.45905 4896.730618 1.19182295 1.197084663 1.278482425 0.83388262 0.94399317 1.091618968 0.923954662 1.102917906 0.916623641 1 12.25760312 -5.748322458 24.99999888 0.979227392 1.219925529 0.675727685 0.079021541 137.7388709 262519.1102 0.021316436 0.036636425 1.79E-06 5.748322458 0.240698137 DGDYRDQDYR ddPTM_A459_MK2206_30min_R1 1 DGDYRDQDYR 10 1 P98175-5;P98175-2;P98175 P98175-5 RBM10 RNA-binding protein 10 0 112.3 0.0074006 0 5560.2 5795.7 5378.2 5305.1 6189.5 4783.2 4700.4 5140.6 3650.4 3191.1 FALSE TRUE 5087.275792 5418.398877 5013.142769 5713.699721 5942.959109 5054.02065 4386.844892 5095.656276 4029.872143 3586.43756 1.418476053 1.510802513 1.397805674 1.593140721 1.657064708 1.409203581 1.223176152 1.420812768 1.123642075 1 11.8083358 -8.140933462 0.769235788 1.002350768 1.50760526 0.718822274 0.103111305 0.347940242 0.433794737 0.103418326 0.042187677 7.23E-09 8.140933462 0.505254493 DGEEAGAYDGPR ddPTM_A459_MK2206_30min_R2 1 DGEEAGAYDGPR 12 0 H7BZJ3;P30101 H7BZJ3;P30101 PDIA3 Protein disulfide-isomerase A3 0 128.91 0.033031 19627000 63605 81351 66468 72196 65786 61899 79139 61453 64498 59089 FALSE TRUE 68474.6477 77311.22764 68684.00995 66297.35586 63202.91109 64254.60982 68747.95424 69485.1181 70107.91945 57160.93077 1.197927444 1.352518698 1.201590125 1.159836884 1.105701224 1.124100132 1.202708796 1.215605085 1.226500662 1 15.80274179 -14.52287875 0.226759351 5.45E-09 1.219270375 0.453642075 0.064408542 167.9726651 1.677191383 77.44488674 0.12927558 3.00E-15 14.52287875 1.219270369 DGETLEGS(ph)DAEESLDK ddPTM_A459_MK2206_30min_R2 2 DGETLEGSDAEESLDK 16 0 Q9P2D1;Q9P2D1-4;Q9P2D1-3 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 DGETLEGS(0.998)DAEES(0.002)LDK;DGETLEGS(1)DAEESLDK 107.73 0.0032672 9987600 54950 34173 44633 37574 31320 21903.1 49719 34496 20452 53928 TRUE FALSE 59157.01425 32476.01851 46121.04194 34504.08401 30090.21943 22736.63782 43190.83558 39004.74564 22230.87799 52168.33378 1.133964035 0.622523592 0.884081177 0.661399004 0.576790885 0.435832164 0.827912882 0.747670911 0.426137398 1 15.67088673 -2.927172252 1.65231489 0.67156996 199.9999988 0.345943145 0.178710571 672.8698079 5.471989298 0.047524836 505250.2766 0.001182572 2.927172252 199.3284288 DGFIDKEDLHDMLASLGK ddPTM_A459_MK2206_30min_R1 1 DGFIDKEDLHDMLASLGK 18 1 J3QRS3;P19105;O14950;J3KTJ1;P24844 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 0 67.299 0.023705 5988800 6713.7 5973.9 6300.7 5152.2 5341.5 6443.9 7031.9 6050.6 6859.1 6826.2 FALSE TRUE 6142.66456 5584.998024 5873.026039 5549.023337 5128.736744 6808.748049 6562.814781 5997.700242 7572.127991 7671.881191 0.800672535 0.727982862 0.765526198 0.723293701 0.668510971 0.887493938 0.855437489 0.781776997 0.986997557 1 12.90536466 -8.013523267 0.683857665 1.006377369 0.742892495 0.665346471 0.061131363 0.419665333 0.413831317 0.059492063 0.027346026 9.69E-09 8.013523267 -0.263484874 DGFPS(ph)GTPALNAK ddPTM_A459_MK2206_30min_R2 2 DGFPSGTPALNAK 13 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 DGFPS(1)GTPALNAK;DGFPS(0.997)GT(0.003)PALNAK 162.88 0.0003632 15953800 77895 74003 84503 89317 86193 68674 97546 65086 58720 89803 TRUE FALSE 83858.70109 70328.11863 87320.28784 82019.51539 82808.62973 71287.43719 84738.09303 73592.96367 63827.35946 86872.73546 0.965305175 0.809553403 1.005151816 0.94413414 0.953217707 0.820596207 0.975427936 0.847135333 0.73472257 1 16.40661585 -6.741579814 24.99323624 0.872263069 0.932829232 0.110873008 0.084382252 573.1580801 721317.126 0.027522026 0.027486925 1.81E-07 6.741579814 0.060566163 DGFQHPAR ddPTM_A459_MK2206_30min_R2 2 DGFQHPAR 8 0 F5H1H2;F5H2E6;A0A0C4DGG8;Q8IX12-2;Q8IX12;F5H3E1 F5H1H2 CCAR1 Cell division cycle and apoptosis regulator protein 1 0 ; 90.37 0.039849 934780 11621 16648.6 16893.7 16343.7 13346.9 15806.5 14809.5 12469.5 14175.4 13792.7 FALSE TRUE 12510.7127 15821.85473 17456.92753 15008.36743 12822.83364 16408.02743 12864.99486 14099.30646 15408.35067 13342.64533 0.937648599 1.185810935 1.308355809 1.124841968 0.961041332 1.229743205 0.964201217 1.056709979 1.154819774 1 13.7037571 -6.009471744 24.77859894 1.065276552 1.159537881 0.09595356 0.115132441 892.2292795 2334132.521 0.032969457 0.04597067 9.78E-07 6.009471744 0.09426133 DGGAWGTEQR ddPTM_A459_MK2206_30min_R1 1 DGGAWGTEQR 10 0 P09382 P09382 LGALS1 Galectin-1 0 133.99 0.038955 0 3575 3305 3325.2 2535.4 3730.4 3061.3 3449.6 3243.3 2694.8 2530.2 FALSE TRUE 3270.927477 3089.843899 3099.494689 2730.676947 3581.810269 3234.62816 3219.483478 3214.94417 2974.934103 2843.660278 1.150252547 1.086572796 1.089966587 0.960268344 1.259577417 1.137487549 1.132161779 1.130565488 1.046163681 1 11.47353341 -8.454793058 3.422974083 1.000798153 1.116743301 0.241359045 0.069714602 0.326450618 7.692895411 0.068186432 0.018071393 3.51E-09 8.454793058 0.115945148 DGGAWGTEQR ddPTM_A459_MK2206_30min_R2 1 DGGAWGTEQR 10 0 P09382 P09382 LGALS1 Galectin-1 0 164.46 0.0051963 48469000 47643 61619 58804 52223 57885 68450 58510 46667 64139 54039 FALSE TRUE 51290.58471 58559.09006 60764.49601 47956.21385 55612.14405 71054.91272 50827.56672 52766.53713 69717.69428 52275.71186 0.981155165 1.120196894 1.16238486 0.917370843 1.063823754 1.359233766 0.972297936 1.009389165 1.333653657 1 15.67385318 -6.551887644 24.99997072 1.134914846 1.050443436 0.0892336 0.137885703 591.1736048 509471.4581 0.045413456 0.045414027 2.81E-07 6.551887644 -0.08447141 DGGGLAPPPGSCS(ph)PSLSPSSNR ddPTM_A459_MK2206_30min_R2 1 DGGGLAPPPGSCSPSLSPSSNR 22 0 A8MUP8;P10276-3;P10276-2;P10276 A8MUP8 RARA Retinoic acid receptor alpha 1 DGGGLAPPPGS(0.23)CS(0.761)PS(0.009)LSPSSNR 205.92 1.32E-35 0 12988 15643 15644 17197 16695 17004 18351 17195 17440 17519 TRUE FALSE 13982.37127 14866.19137 16165.56315 15791.95009 16039.47041 17651.09914 15941.49166 19442.44554 18956.89968 16947.35646 0.825047334 0.877198246 0.953869306 0.931823799 0.946429046 1.041525218 0.940647687 1.147225857 1.118575615 1 14.04877263 -6.159604093 0.514200359 1.083520726 0.822099051 0.642697822 0.05720284 0.853212632 0.425582072 0.046556099 0.11495427 6.92E-07 6.159604093 -0.261421675 DGGGLAPPPGSCSPS(ph)LSPSSNR ddPTM_A459_MK2206_30min_R1 1 DGGGLAPPPGSCSPSLSPSSNR 22 0 A8MUP8;P10276-3;P10276-2;P10276 A8MUP8 RARA Retinoic acid receptor alpha 1 DGGGLAPPPGS(0.077)CS(0.242)PS(0.589)LS(0.09)PS(0.002)S(0.001)NR 112.56 3.98E-05 0 883.63 856.32 979.05 932.06 854.65 1043.9 898.3 734.12 670.13 701.95 TRUE FALSE 808.4726284 800.5734124 912.5948138 1003.847423 820.6074807 1103.004716 838.376046 727.7016662 739.7924116 788.9128655 1.024793312 1.014780526 1.15677517 1.272443975 1.040175052 1.398132499 1.062697901 0.922410697 0.937736528 1 9.623722155 -7.531508485 9.913599774 0.956216537 1.15273361 0.384288551 0.112267942 0.202427767 195.1679065 0.053328845 0.031570861 2.94E-08 7.531508485 0.196517073 DGGGLAPPPGSCSPSLS(ph)PSSNR ddPTM_A459_MK2206_30min_R1 1 DGGGLAPPPGSCSPSLSPSSNR 22 0 A8MUP8;P10276-3;P10276-2;P10276 A8MUP8 RARA Retinoic acid receptor alpha 1 DGGGLAPPPGS(0.148)CS(0.148)PS(0.281)LS(0.363)PS(0.056)S(0.003)NR 93.243 0.0017922 0 753.7 804.47 691.73 600.77 916.8 720.9 889.22 775.65 843.71 699.23 TRUE FALSE 689.5938572 752.0988568 644.7772949 647.0414095 880.2819146 761.716735 829.9017563 768.8685738 931.4166737 785.8558913 0.87750676 0.957044243 0.820477777 0.823358858 1.12015692 0.969282973 1.056048272 0.978383674 1.185225795 1 9.618120968 -6.256493583 24.99692643 1.046550392 0.872334635 0.614038229 0.07057842 294.3852531 1487873.675 0.020617669 0.025779629 5.54E-07 6.256493583 -0.174215757 DGGQTES(ph)NEEGKENR ddPTM_A459_MK2206_30min_R1 1 DGGQTESNEEGKENR 15 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5;Q5VU81;Q5VU80;Q5VU79;Q5VU78;Q5VU77 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 DGGQT(0.091)ES(0.909)NEEGKENR 89.913 0.0088573 21760000 1972.2 2369.7 2176.1 1898.1 1665.4 1633.1 1901.2 2150.4 1031 1729.2 TRUE FALSE 1804.454034 2215.432099 2028.392395 2044.291991 1599.063591 1725.564711 1774.374417 2131.59928 1138.176139 1943.426351 0.928491081 1.139961953 1.043719714 1.051900933 0.822806375 0.887898175 0.91301346 1.096825346 0.585654372 1 10.92438672 -6.245505166 23.67185394 0.890816512 1.048278798 0.249899201 0.132438671 576.7555994 856825.9454 0.03732179 0.047988434 5.68E-07 6.245505166 0.157462286 DGGQTESNEEGKENR ddPTM_A459_MK2206_30min_R2 2 DGGQTESNEEGKENR 15 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5;Q5VU81;Q5VU80;Q5VU79;Q5VU78;Q5VU77 F8W726 UBAP2L Ubiquitin-associated protein 2-like 0 ; 107.69 0.011772 8990800 8942 12079.1 11051.6 9657.9 11577.2 10593.3 12851.2 10257.4 9939.5 12095.3 FALSE TRUE 9626.606395 11479.26946 11420.05483 8868.818676 11122.62096 10996.43545 11163.822 11598.0774 10804.01974 11700.63135 0.822742475 0.981081201 0.976020395 0.757977788 0.950600068 0.939815564 0.954121335 0.991235178 0.923370664 1 13.51429876 -6.489153077 24.96543617 0.958966753 0.892446569 0.241913203 0.064933429 1066.047541 789142.7803 0.020378683 0.02309314 3.24E-07 6.489153077 -0.066520184 DGGRS(ph)SPGGQDEGGFMAQGK ddPTM_A459_MK2206_30min_R1 1 DGGRSSPGGQDEGGFMAQGK 20 1 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30 A0A1B0GTU4 PXN Paxillin 1 DGGRS(0.5)S(0.5)PGGQDEGGFMAQGK 86.453 0.0012476 10774000 8536.9 9538.1 10735 12618 12665 8688.1 7792 8647.7 5125.6 3506.4 TRUE FALSE 7810.791826 8917.167956 10006.33811 13589.84055 12160.52623 9180.012714 7272.209897 8572.094071 5658.424462 3940.799304 1.982032381 2.26278155 2.539164605 3.448498515 3.085801964 2.329479886 1.845364185 2.175217109 1.43585705 1 11.94427256 -8.059169107 0.903506492 1.041737313 2.644980477 0.615423468 0.424054599 0.415976167 0.661590708 0.446697069 0.169944762 8.73E-09 8.059169107 1.603243164 DGGS(ph)GNSTIIVSR ddPTM_A459_MK2206_30min_R1 2 DGGSGNSTIIVSR 13 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DGGS(0.997)GNS(0.003)TIIVSR;DGGS(0.992)GNS(0.007)TIIVSR 145.46 0.00062665 70458000 4050.4 4316.8 3997.1 3264.5 3919 3436.8 3921.7 3496 3671.8 3739.8 TRUE FALSE 3705.892211 4035.775535 3725.787989 3515.932356 3762.897931 3631.388646 3660.090549 3465.434841 4053.49675 4203.114658 0.881701431 0.960186877 0.886435011 0.836506411 0.895264164 0.863975633 0.870804355 0.824492102 0.964403087 1 12.0372431 -10.92649471 5.166681426 1.000095386 0.884969758 0.379023358 0.043282476 4.73E-05 5.45E-06 0.041640377 0.01009092 1.18E-11 10.92649471 -0.115125628 DGGS(ph)GNSTIIVSR ddPTM_A459_MK2206_30min_R2 3 DGGSGNSTIIVSR 13 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DGGS(0.672)GNS(0.296)T(0.032)IIVSR;DGGS(0.984)GNS(0.01)T(0.006)IIVSR;DGGS(0.999)GNS(0.001)TIIVSR 118.71 0.002987 78753000 395962 322332 348844 387980 334482 243263 434239 327425 239310 364192 TRUE FALSE 426277.1552 306325.4616 360474.2849 356280.7929 321348.556 252520.5439 377222.8977 370220.5717 260124.7512 352308.4449 1.209954406 0.869480894 1.023178099 1.0112752 0.912122774 0.716759838 1.070717728 1.050842173 0.738343787 1 18.42647953 -4.752771884 24.99599107 0.936345539 1.209954923 0.329248329 0.118681011 412.8371887 1190482.456 0.029442375 0.340063886 1.77E-05 4.752771884 0.273609384 DGGSGNS(ph)TIIVSR ddPTM_A459_MK2206_30min_R1 1 DGGSGNSTIIVSR 13 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DGGS(0.253)GNS(0.718)T(0.029)IIVSR 102.29 0.0094188 1998500 1609.5 1224.2 1173.9 1186.6 2706.1 1993.2 2080.6 1900.9 1155.7 983.85 TRUE FALSE 1472.603573 1144.504357 1094.218939 1277.992138 2598.310307 2106.053262 1941.80697 1884.280632 1275.839151 1105.736766 1.331784941 1.035060417 0.989583572 1.155783345 2.349845268 1.904660609 1.756120471 1.704095125 1.153836239 1 10.11079226 -6.041201891 24.88950597 1.703462781 1.104142534 0.318483344 0.364380364 495.5645739 299362.9803 0.107488017 0.138783695 9.09E-07 6.041201891 -0.599320247 DGIVLGADTR ddPTM_A459_MK2206_30min_R2 1 DGIVLGADTR 10 0 Q99436;Q5TBG5;Q99436-2 Q99436 PSMB7 Proteasome subunit beta type-7;Proteasome subunit beta type 0 133.99 0.030151 6016100 36964 42499 35041 42981 43048 40017 43388 36873 33257 42975 FALSE TRUE 39793.99226 40388.56146 36209.24945 39469.31481 41357.71922 41539.87498 37691.10348 41692.4277 36149.63375 41572.72927 0.957213851 0.971515755 0.870985622 0.949403984 0.994828099 0.999209715 0.90663048 1.002879254 0.869551612 1 15.34334984 DGKELEET(ph)AAR ddPTM_A459_MK2206_30min_R1 1 DGKELEETAAR 11 1 A0A0A0MTS7;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12;A0A0A0MRA3;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9 A0A0A0MTS7 TTN Titin 1 DGKELEET(1)AAR 86.344 0.046507 7095800 2107.7 2205.4 2320.9 2205 2680.7 1921.2 1975.3 2267.2 1679 1897.6 TRUE FALSE 1928.429047 2061.828059 2163.363774 2374.829482 2573.922043 2029.976684 1843.531341 2247.378109 1853.538058 2132.689014 0.904224214 0.966773892 1.014383138 1.113537635 1.206890468 0.951839049 0.864416391 1.053776755 0.869108457 1 11.05845789 -6.954575236 24.99996378 0.945137319 1.043542647 0.204107793 0.092110722 217.6844735 119804.0623 0.034473503 0.03040276 1.11E-07 6.954575236 0.098405328 DGKS(ph)PTVPCLQEEAGEPLGGK ddPTM_A459_MK2206_30min_R1 4 DGKSPTVPCLQEEAGEPLGGK 21 1 A1L390-3;A1L390;G3V311;A1L390-2 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 DGKS(0.5)PT(0.5)VPCLQEEAGEPLGGK;DGKS(0.88)PT(0.12)VPCLQEEAGEPLGGK;DGKS(0.84)PT(0.16)VPCLQEEAGEPLGGK;DGKS(0.919)PT(0.081)VPCLQEEAGEPLGGK 121.84 4.01E-05 75881800 23327.2 26440.4 23909 18988.2 16093.5 13546.3 14403.2 16004.4 15681.5 14912.5 TRUE FALSE 21343.09914 24719.12515 22286.12369 20450.67445 15452.46182 14313.2798 13442.38881 15864.47522 17311.64804 16759.97308 1.273456648 1.474890504 1.32972312 1.220209266 0.921986076 0.854015679 0.802053126 0.946569254 1.03291622 1 14.03273221 -6.106042492 2.448456051 0.910351746 1.3709862 0.864302882 0.078557639 0.0997937 1.173169831 0.026076822 0.036865234 7.83E-07 6.106042492 0.460634454 DGKS(ph)PTVPCLQEEAGEPLGGK ddPTM_A459_MK2206_30min_R2 3 DGKSPTVPCLQEEAGEPLGGK 21 1 A1L390-3;A1L390;G3V311;A1L390-2 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 DGKS(0.751)PT(0.249)VPCLQEEAGEPLGGK;DGKS(0.5)PT(0.5)VPCLQEEAGEPLGGK;DGKS(0.796)PT(0.204)VPCLQEEAGEPLGGK 96.562 0.00021121 54491800 247245 256636 228913 197059 228494 135500 213284 157879 145122 202018 TRUE FALSE 266174.2673 243891.8294 236544.8452 180958.6493 219522.1775 140656.5474 185279.5546 178514.3274 157744.4492 195426.1692 1.362019572 1.247999848 1.210405168 0.925969383 1.123299804 0.719742643 0.94807955 0.913461734 0.807181811 1 17.57626414 -5.574921058 0.926469545 0.886594843 1.392112747 0.718393462 0.10300376 0.421415749 0.598656166 0.038890036 0.168823708 2.66E-06 5.574921058 0.505517905 DGKSPT(ph)VPCLQEEAGEPLGGK ddPTM_A459_MK2206_30min_R2 1 DGKSPTVPCLQEEAGEPLGGK 21 1 A1L390-3;A1L390;G3V311;A1L390-2 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 DGKS(0.239)PT(0.761)VPCLQEEAGEPLGGK 104.35 0.0002191 37976000 65896 65204 56958 48393 53466 31130 55496 42468 30791 50938 TRUE FALSE 70941.04843 61966.06418 58856.95129 44439.1371 51366.65619 32314.67396 48209.30854 48018.71341 33469.14552 49275.89723 1.439670354 1.257532945 1.194436928 0.901843286 1.042429648 0.655790676 0.978354759 0.974486841 0.679219403 1 15.58859452 -5.412234345 1.050590875 0.869707684 1.468226318 0.698962597 0.12629419 0.434166656 0.740716781 0.043114621 0.231158515 3.87E-06 5.412234345 0.598518635 DGLAFNALIHR ddPTM_A459_MK2206_30min_R1 2 DGLAFNALIHR 11 0 O43707;M0QZQ3;C9JY79;Q9H254-2;Q9H254-4;Q9H254 O43707 ACTN4;SPTBN4 "Alpha-actinin-4;Spectrin beta chain, non-erythrocytic 4" 0 ; 192.5 2.83E-05 63575000 18227.1 18715.2 19425.5 16704.7 19453.5 17497 19295 18089.4 15504.6 14818.2 FALSE TRUE 16676.78943 17496.83708 18106.95118 17991.29889 18678.6259 18487.66502 18007.86576 17931.24628 17116.35865 16653.99049 1.001368978 1.050609287 1.087243997 1.080299578 1.121570588 1.110104214 1.081294346 1.076693679 1.027763206 1 14.02358028 -1.522984079 9.343189756 1.069962758 4.40E-05 0 0.040754336 0 0 0.00952374 0 0.029992725 1.522984079 -1.069918723 DGLAFNALIHR ddPTM_A459_MK2206_30min_R2 2 DGLAFNALIHR 11 0 O43707;M0QZQ3;C9JY79;Q9H254-2;Q9H254-4;Q9H254 O43707 ACTN4;SPTBN4 "Alpha-actinin-4;Spectrin beta chain, non-erythrocytic 4" 0 ; 163.84 0.00090411 43691000 224540 270540 237750 272090 275440 267200 282990 225448 236680 264790 FALSE TRUE 241730.955 257105.377 245676.4663 249859.3766 264624.8416 277368.4832 245833.0731 254914.8277 257265.9986 256149.924 0.943708869 1.003730054 0.959112002 0.975441932 1.033085771 1.082836485 0.959723389 0.995178229 1.004357115 1 17.96662894 -6.174854069 7.195104161 1.013107267 0.971717184 0.284545207 0.032644726 0.399603881 28.89829702 0.010144211 0.01313341 6.69E-07 6.174854069 -0.041390083 DGLAPEKTS(ph)PDR ddPTM_A459_MK2206_30min_R1 1 DGLAPEKTSPDR 12 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.037)S(0.963)PDR 134.4 0.0076204 8375300 3428.2 3262.2 3024.5 2279.4 2334.3 2175.3 3030.4 2600.6 4647.3 5685.5 TRUE FALSE 3136.613588 3049.830187 2819.205367 2454.959783 2241.319888 2298.463606 2828.247545 2577.863228 5130.403466 6389.862663 0.490873396 0.477291978 0.441199681 0.384196017 0.350761825 0.359704696 0.442614763 0.403430146 0.802897298 1 12.64156921 -8.404240279 2.910297906 0.996010443 0.415040081 0.947503615 0.046475263 0.054042522 0.8754644 0.049909539 0.013492769 3.94E-09 8.404240279 -0.580970362 down DGLAPEKTS(ph)PDRDK ddPTM_A459_MK2206_30min_R1 1 DGLAPEKTSPDRDK 14 2 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.117)S(0.883)PDRDK 125.36 0.045269 16428000 2432.4 2964.4 3003.3 2031.9 2189.7 2111.7 2763.6 2431.2 3012.6 2819 TRUE FALSE 2225.511607 2771.417021 2799.444364 2188.39729 2102.479612 2231.262629 2579.245286 2409.944275 3325.770551 3168.239002 0.702444356 0.874749985 0.883596333 0.690729862 0.663611429 0.704259567 0.814094292 0.760657347 1.049722116 1 11.62946546 -8.258480742 24.49814273 1.024861088 0.763782358 0.675763285 0.072885255 116.2078699 962254.287 0.05970206 0.020312855 5.51E-09 8.258480742 -0.261078731 DGLGFCALIHR ddPTM_A459_MK2206_30min_R1 2 DGLGFCALIHR 11 0 P12814-4;P12814-3;P12814;P12814-2;H9KV75;G3V2N5;G3V2W4;G3V2X9 P12814-4 ACTN1 Alpha-actinin-1 0 ; 152.54 0.00080997 15299900 18774.9 18594.8 18933.8 17506.3 19387.9 18029.3 18101 17017.9 16435.6 14750.7 FALSE TRUE 17177.99616 17384.27514 17648.62641 18854.63826 18615.63889 19050.10339 16893.51532 16869.11429 18144.13944 16578.12808 1.036184308 1.048627146 1.064572932 1.137320099 1.122903551 1.149110641 1.019024297 1.017552417 1.094462496 1 14.01699349 -11.46484501 13.63676149 0.987502653 1.077305434 0.202727013 0.045578419 0.019246437 8.19E-05 0.049046125 0.011810171 3.43E-12 11.46484501 0.089802781 DGLGFCALIHR ddPTM_A459_MK2206_30min_R2 1 DGLGFCALIHR 11 0 P12814-4;P12814-3;P12814;P12814-2;H9KV75;G3V2N5;G3V2W4;G3V2X9 P12814-4 ACTN1 Alpha-actinin-1 0 136.02 0.0020367 2406500 28196 36966 36669 42750 44571 39354 40141 30583 37084 32300 FALSE TRUE 30354.70744 35130.32219 37891.52616 39257.18825 42820.91859 40851.64405 34870.43848 34580.30311 40309.49929 31246.05365 0.971473319 1.124312292 1.212681979 1.256388685 1.370442459 1.307417715 1.115994963 1.106709458 1.290066891 1 14.93138637 -4.843952906 2.103716943 1.219326517 0.922649242 0.320470837 0.104198164 0.697080331 3.919473989 0.028725304 0.380451593 1.43E-05 4.843952906 -0.296677275 DGLLMPSMSES(ph)DLTTSGR ddPTM_A459_MK2206_30min_R1 1 DGLLMPSMSESDLTTSGR 18 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 DGLLMPS(0.026)MS(0.074)ES(0.771)DLT(0.058)T(0.032)S(0.039)GR 68.845 0.026766 2138300 2399.2 2143.9 2146.2 1608.6 2211 1628.5 2212.2 1717.6 1664.7 1595.5 TRUE FALSE 2195.135441 2004.33172 2000.521924 1732.494651 2122.931188 1720.704263 2064.628174 1702.583204 1837.751522 1793.162585 1.224169776 1.117763518 1.115638894 0.966167075 1.183903348 0.959591883 1.151389278 0.949486242 1.024866087 1 10.80829059 -1.522878745 0.443859932 1.023410175 5.207592729 0.383168238 0.075396152 89.59218442 1.093940079 0.045144117 338.3915458 0.03 1.522878745 4.184182554 DGLNDDDFEPYLS(ph)PQAR ddPTM_A459_MK2206_30min_R1 4 DGLNDDDFEPYLSPQAR 17 0 Q9Y5A9;S4R3J8 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 1 DGLNDDDFEPYLS(1)PQAR;DGLNDDDFEPYLS(1)PQAR;DGLNDDDFEPYLS(1)PQAR;DGLNDDDFEPYLS(1)PQAR 362.61 6.14E-198 65472400 7899.9 8247.6 7954.5 5606.28 6447.5 7142.2 8273.6 6270.83 6290.06 7083 TRUE FALSE 7227.972021 7710.679741 7414.570703 6038.076657 6190.682422 7546.585192 7721.68324 6216.004794 6943.934246 7960.495514 0.907980164 0.968618062 0.93142075 0.758505127 0.777675512 0.948004453 0.970000326 0.780856516 0.872299247 1 12.95864252 -5.795688647 0.003506449 1.764091606 5.12E-08 0.02178625 0.084036427 384694.3618 306.3735253 75736.3708 78407.6834 1.60E-06 5.795688647 -1.764091555 DGLNDDDFEPYLS(ph)PQAR ddPTM_A459_MK2206_30min_R2 2 DGLNDDDFEPYLSPQAR 17 0 Q9Y5A9;S4R3J8 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 1 DGLNDDDFEPYLS(1)PQAR;DGLNDDDFEPYLS(1)PQAR 194.77 7.29E-08 19913200 28051 28451 25362 23669 23703 25559 29928 20514.8 20021.6 26709 TRUE FALSE 30198.60613 27038.16471 26207.55642 21735.16699 22772.30112 26531.66566 25998.41765 23196.1548 21763.04258 25837.48752 1.168790352 1.046470354 1.014322945 0.841226028 0.8813667 1.026867091 1.006228552 0.897771302 0.842304909 1 14.65717817 -5.03279121 1.636220162 0.930920897 1.188479432 0.560792232 0.065831758 0.495119952 1.837167153 0.020158193 0.174587469 9.27E-06 5.03279121 0.257558535 DGLNQTTIPVS(ph)PPSTTK ddPTM_A459_MK2206_30min_R2 2 DGLNQTTIPVSPPSTTK 17 0 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 DGLNQTTIPVS(0.892)PPS(0.086)T(0.021)T(0.001)K;DGLNQTTIPVS(1)PPSTTK 179.09 8.30E-08 6935800 61459 44950 43500 52260 44220 33543 59531 44379 41348 50710 TRUE FALSE 66164.34829 42717.84836 44950.26829 47990.19083 42483.70061 34819.50237 51714.50819 50179.48768 44944.3743 49055.33685 1.348769625 0.870809398 0.916317595 0.978286847 0.866036263 0.709800495 1.054207585 1.022915974 0.916197445 1 15.58212248 -4.757114382 24.99953033 0.923477473 1.348770253 0.647083042 0.093634242 85.19655324 492393.537 0.024358622 0.185932585 1.75E-05 4.757114382 0.42529278 DGLNQTTIPVS(ph)PPSTTKPSR ddPTM_A459_MK2206_30min_R1 4 DGLNQTTIPVSPPSTTKPSR 20 1 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 DGLNQTTIPVS(0.997)PPS(0.001)T(0.001)T(0.001)KPSR;DGLNQTTIPVS(0.977)PPS(0.007)T(0.007)T(0.007)KPS(0.002)R;DGLNQTTIPVS(0.992)PPS(0.004)T(0.004)T(0.001)KPSR;DGLNQTTIPVS(0.995)PPS(0.002)T(0.002)T(0.001)KPSR 104.97 0.00027909 680017000 11510.2 11375 12108.4 10259.9 10417.3 9912.3 10771.1 10374.5 10634.3 9700.3 TRUE FALSE 10531.19705 10634.48543 11286.51554 11050.11928 10002.35688 10473.52586 10052.57957 10283.79684 11739.77354 10902.0464 0.96598351 0.97545773 1.035265778 1.013582118 0.917475171 0.960693569 0.922081892 0.943290504 1.076841275 1 13.41231134 -8.254396025 24.99937911 1.038420639 0.967534902 0.355001565 0.038641734 589.8369905 2093559.458 0.029672464 0.010634302 5.57E-09 8.254396025 -0.070885737 DGLNQTTIPVS(ph)PPSTTKPSR ddPTM_A459_MK2206_30min_R2 5 DGLNQTTIPVSPPSTTKPSR 20 1 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 DGLNQTTIPVS(0.994)PPS(0.002)T(0.002)T(0.002)KPSR;DGLNQTTIPVS(0.975)PPS(0.006)T(0.006)T(0.006)KPS(0.006)R;DGLNQTTIPVS(0.982)PPS(0.007)T(0.007)T(0.003)KPS(0.001)R;DGLNQTTIPVS(0.996)PPS(0.001)T(0.001)T(0.001)KPSR;DGLNQTTIPVS(0.971)PPS(0.004)T(0.011)T(0.011)KPS(0.003)R 109.68 0.00021655 1415583000 252803 316220 266151 318402 305513 259739 322450 253352 242489 302418 TRUE FALSE 272157.7921 300516.9746 275024.3415 292387.5381 293517.0245 269623.5497 280111.9277 286465.9763 263580.2549 292550.1254 0.930294566 1.027232424 0.940093056 0.999444241 1.003305072 0.921631974 0.957483533 0.979203054 0.900974677 1 18.15832431 -6.752731623 24.99965614 0.950910392 0.981548763 0.124949956 0.03718928 373.5855303 1072550.094 0.011641126 0.011467079 1.77E-07 6.752731623 0.03063837 DGMDNQGGYGS(ph)VGR ddPTM_A459_MK2206_30min_R1 1 DGMDNQGGYGSVGR 14 0 P31942;P31942-4;P31942-3;P31942-2 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 1 DGMDNQGGYGS(1)VGR 95.9 0.012174 3115200 1887.3 2350.5 2325.9 2075.4 2226.1 2050.9 2477 2315.3 1986.4 2191.6 TRUE FALSE 1726.775224 2197.482023 2168.024388 2235.247668 2137.429723 2167.020186 2311.76385 2295.057576 2192.893388 2463.111954 0.701054299 0.892156777 0.880197258 0.90748927 0.867776115 0.879789561 0.938554111 0.931771523 0.890293835 1 11.26626649 -4.195057958 1.59804985 0.909250383 5.34E-11 0.739254645 0.037138025 3.019668544 1.951142434 0.009967383 6.823298234 6.38E-05 4.195057958 -0.909250383 DGMDNQGGYGSVGR ddPTM_A459_MK2206_30min_R2 1 DGMDNQGGYGSVGR 14 0 P31942;P31942-4;P31942-3;P31942-2 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 0 186.51 0.001162 10924000 11653 12593 12635 15239 11428 15709 15377 9958.1 10193 10909 FALSE TRUE 12545.16264 11967.64993 13056.24459 13993.92495 10979.2793 16306.817 13357.98143 11259.65786 11079.56872 10553.04022 1.18877237 1.134047599 1.237202201 1.326056251 1.040390169 1.545224566 1.26579461 1.066958679 1.049893536 1 13.36537106 -7.806748721 5.448282522 1.038644905 1.249952376 0.371288284 0.125080543 0.220710816 14.92678234 0.070258186 0.03376532 1.56E-08 7.806748721 0.21130747 DGNPDNETYLHR ddPTM_A459_MK2206_30min_R1 1 DGNPDNETYLHR 12 0 I3L352;I3L0H8;F6QDS0;H3BQK0;Q9UMR2-3;Q9NUU7-2;Q9UMR2-2;Q9UMR2-4;Q9NUU7;Q9UMR2 I3L352 DDX19A;DDX19B ATP-dependent RNA helicase DDX19B;ATP-dependent RNA helicase DDX19A 0 112.08 0.0091696 2163500 1445.3 1831.3 1699.2 1439.9 1273.3 1724.2 2133.6 1573.3 1948.9 2112.4 FALSE TRUE 1322.369645 1712.082037 1583.863038 1550.801347 1222.581765 1821.822714 1991.271437 1559.544804 2151.495129 2374.10006 0.556998278 0.721149907 0.667142495 0.653216507 0.514966402 0.767374023 0.838747899 0.656899358 0.906236079 1 11.21316503 -8.292181823 0.545514409 1.007096312 0.630897745 0.648061128 0.085680199 0.562267941 0.413149796 0.092091676 0.046263406 5.10E-09 8.292181823 -0.376198567 DGNPDNETYLHR ddPTM_A459_MK2206_30min_R2 2 DGNPDNETYLHR 12 0 I3L352;I3L0H8;F6QDS0;H3BQK0;Q9UMR2-3;Q9NUU7-2;Q9UMR2-2;Q9UMR2-4;Q9NUU7;Q9UMR2 I3L352 DDX19A;DDX19B ATP-dependent RNA helicase DDX19B;ATP-dependent RNA helicase DDX19A 0 ; 124.12 0.004398 12570200 61501 49944 64634 62461 54953 53186 68902 45619 49968 63013 FALSE TRUE 66209.56385 47463.85359 66788.8653 57357.7365 52795.2691 55210.0305 59855.08463 51581.55993 54314.12632 60956.89097 1.086170288 0.778646234 1.09567375 0.940955741 0.866108298 0.905722546 0.981924827 0.846197355 0.891025206 1 15.8955017 -5.998642964 24.99259007 0.909720151 0.974728865 0.101861293 0.092283174 111.5322346 2053971.579 0.024747982 0.036405813 1.00E-06 5.998642964 0.065008714 DGNSTAEETDIPPQSLQQSS(ph)R ddPTM_A459_MK2206_30min_R2 1 DGNSTAEETDIPPQSLQQSSR 21 0 H7BZH9;E9PDC2;A0A088AWP5;Q8WUY3-4;Q8WUY3;Q8WUY3-2;Q8WUY3-3 H7BZH9 PRUNE2 Protein prune homolog 2 1 DGNSTAEETDIPPQSLQQS(0.238)S(0.762)R 67.644 0.0083557 12757000 1451.9 5019.8 3557.6 4197.8 5650.1 3972.8 3043.8 3574.2 4770 3729.9 TRUE FALSE 1563.05858 4770.524031 3676.208608 3854.826312 5428.248685 4123.987688 2644.145404 4041.360212 5184.885978 3608.193668 0.433196974 1.322136357 1.018850136 1.068353494 1.504422762 1.142950758 0.732816929 1.120050802 1.436975521 1 11.81706106 -4.752567825 24.96139084 1.144597351 0.433195587 0.50137021 0.214285284 298.7725819 840576.0851 0.054793525 0.643067458 1.77E-05 4.752567825 -0.711401764 DGPPLLENAHS(ph)S ddPTM_A459_MK2206_30min_R2 1 DGPPLLENAHSS 12 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 DGPPLLENAHS(0.585)S(0.415) 84.734 0.032223 2252500 11399 17849 15245 20070 20522 18913 19864 16122 18369 14977 TRUE FALSE 12271.7162 16962.64461 15753.26069 18430.2168 19716.20317 19632.74747 17255.83294 18229.20076 19966.70242 14488.30172 0.847008604 1.170782121 1.087308989 1.272075717 1.360836042 1.35507583 1.191018332 1.258201348 1.378125802 1 13.82260088 -4.163811979 0.935907539 1.269614813 1.30E-15 0.515128096 0.113957832 4.386502283 1.344214908 0.03654705 7.462985998 6.86E-05 4.163811979 -1.269614813 DGPSS(ph)APATPTK ddPTM_A459_MK2206_30min_R1 4 DGPSSAPATPTK 12 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 DGPS(0.023)S(0.977)APATPTK;DGPS(0.057)S(0.943)APATPTK;DGPS(0.002)S(0.998)APATPTK;DGPS(0.003)S(0.992)APAT(0.005)PTK 190.78 0.00013848 46761800 24708.3 25636.6 23181.2 19806.5 19907.2 18071.7 20989.5 18874.1 18637.1 18058.9 TRUE FALSE 22606.72934 23967.65268 21607.72473 21332.00006 19114.25407 19094.90404 19589.32875 18709.08573 20574.49324 20296.17287 1.113841978 1.180895178 1.064620649 1.051035592 0.94176642 0.940813037 0.965173527 0.921803625 1.013712948 1 14.30892009 -5.808301769 1.612482205 0.959028303 1.145392742 0.805755553 0.035016082 0.143467469 0.759100985 0.010787966 0.022391492 1.55E-06 5.808301769 0.186364438 DGPSS(ph)APATPTK ddPTM_A459_MK2206_30min_R2 2 DGPSSAPATPTK 12 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 DGPS(0.015)S(0.984)APATPTK;DGPS(0.004)S(0.996)APATPTK 162.93 0.00049602 34886000 174858 195906 152758 182267 187808 166419 193074 166784 151010 157818 TRUE FALSE 188245.2629 186177.5929 157850.8755 167375.2031 180433.7143 172752.1917 167723.1519 188583.2415 164144.5768 152668.4116 1.233033481 1.219489945 1.033945882 1.096331594 1.181866716 1.131551641 1.098610709 1.235247289 1.075170529 1 17.22004206 -14.52287875 0.252403446 0.113893293 1.156810238 0.320698801 0.065751455 246.22369 2.432133426 112.7260883 0.096351852 3.00E-15 14.52287875 1.042916945 DGPSSAPAT(ph)PTKAPYSPTTSK ddPTM_A459_MK2206_30min_R2 1 DGPSSAPATPTKAPYSPTTSK 21 1 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 DGPSSAPAT(0.941)PT(0.012)KAPY(0.003)S(0.035)PT(0.006)T(0.002)S(0.001)K 111.63 0.0028032 0 10461 15476 12084 13736 15213 12275 19706 15142 19152 19240 TRUE FALSE 11261.9022 14707.48434 12486.87453 12613.72486 14615.66118 12742.13373 17118.57853 17121.11139 20817.80634 18612.20038 0.605081719 0.790206641 0.670897276 0.677712716 0.785273148 0.684611893 0.919750389 0.919886475 1.118503236 1 14.183961 -7.547243093 1.378453675 1.047791931 0.70041861 0.82203972 0.066760014 0.16695388 0.602145557 0.045332532 0.020770282 2.84E-08 7.547243093 -0.347373321 DGPSSAPATPT(ph)KAPYSPTTSK ddPTM_A459_MK2206_30min_R2 1 DGPSSAPATPTKAPYSPTTSK 21 1 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 DGPSSAPAT(0.163)PT(0.822)KAPY(0.006)S(0.007)PT(0.001)TSK 97.776 0.00048293 7816700 20722 31442 23810 29494 33299 27108 36432 33115 40284 44841 TRUE FALSE 22308.49225 29880.636 24603.81352 27084.24585 31991.51395 28139.61394 31648.43464 37443.2442 43787.8295 43377.84184 0.514283129 0.688845612 0.567197732 0.624379746 0.737508197 0.648709404 0.729599106 0.863188269 1.009451546 1 15.40467066 -7.820837704 1.105897977 1.026839086 0.62263538 0.874687057 0.057145149 0.163532521 0.361024582 0.049614876 0.01907033 1.51E-08 7.820837704 -0.404203705 DGQAMLWDLNEGK ddPTM_A459_MK2206_30min_R1 2 DGQAMLWDLNEGK 13 0 P63244;J3KPE3;H0Y8W2;H0YAM7;H0YAF8;D6REE5;D6RAC2;D6R9L0;D6R9Z1;D6RFX4;H0Y8R5 P63244 GNB2L1 "Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed" 0 ; 201.09 0.014998 52132000 7414.5 7846.9 8366.8 6685.2 7437.7 6443.1 8196.3 7446.8 6793.2 7048.7 FALSE TRUE 6783.85784 7336.065384 7798.884927 7200.095262 7141.440659 6807.902754 7649.539782 7381.693413 7499.37745 7921.946171 0.85633728 0.926043326 0.984465781 0.908879599 0.901475535 0.859372509 0.965613704 0.931803026 0.946658471 1 12.95163918 -8.587594387 0.826446331 0.999090605 0.913403338 0.342628454 0.037214902 0.924365387 1.388656176 0.037684062 0.013522214 2.58E-09 8.587594387 -0.085687267 DGQAMLWDLNEGK ddPTM_A459_MK2206_30min_R2 1 DGQAMLWDLNEGK 13 0 P63244;J3KPE3;H0Y8W2;H0YAM7;H0YAF8;D6REE5;D6RAC2;D6R9L0;D6R9Z1;D6RFX4;H0Y8R5 P63244 GNB2L1 "Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed" 0 157.56 0.005054 2326700 20177 22594 21707 25959 23401 18060 22676 18012 19010 21832 FALSE TRUE 21721.76663 21472.01481 22430.70055 23838.06666 22482.15916 18747.28596 19698.61396 20366.23024 20663.45544 21119.62363 1.028511067 1.016685486 1.062078612 1.128716453 1.064515143 0.887671404 0.932716146 0.964327329 0.978400742 1 14.3662965 -6.741374833 24.99924454 0.949149401 1.061611199 0.652421021 0.039175377 156.8602436 195438.2857 0.013942317 0.01392525 1.81E-07 6.741374833 0.112461797 DGQDAIAQS(ph)PEK ddPTM_A459_MK2206_30min_R1 4 DGQDAIAQSPEK 12 0 Q9NWH9;H7BXE3;H0YL55 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK 184.87 0.00010447 278335000 26405.6 34263.8 32634.4 24730.3 17449.8 19165.9 25520 20248.7 36756.3 38727 TRUE FALSE 24159.66506 32033.22039 30419.26785 26635.03199 16754.73752 20251.0567 23817.60736 20071.66775 40577.24892 43524.79313 0.555078228 0.735976396 0.698895174 0.6119508 0.384946976 0.465276346 0.547219312 0.461154811 0.932278961 1 15.40954982 -8.329120795 5.746402216 0.983206017 0.561103561 0.71926929 0.102174665 0.139897908 8.606731054 0.110252713 0.028997891 4.69E-09 8.329120795 -0.422102455 DGQDAIAQS(ph)PEK ddPTM_A459_MK2206_30min_R2 5 DGQDAIAQSPEK 12 0 Q9NWH9;H7BXE3;H0YL55 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK 137.17 0.0013466 716852000 597546 412403 478501 392798 328355 246117 509362 422902 273220 517730 TRUE FALSE 643294.5812 391923.6667 494453.9845 360705.1469 315462.1328 255483.1549 442482.1575 478176.7434 296984.1817 500836.5125 1.284440262 0.782538128 0.987256265 0.720205372 0.629870477 0.510112878 0.883486221 0.954756156 0.592976299 1 18.93398022 -2.268294523 1.148579036 0.759693244 199.9975266 0.44389337 0.165280339 562.6087106 2.561190623 0.050282105 293184.8293 0.005391449 2.268294523 199.2378333 DGQDAIAQS(ph)PEKESK ddPTM_A459_MK2206_30min_R1 5 DGQDAIAQSPEKESK 15 1 Q9NWH9;H7BXE3;H0YL55 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(1)PEKESK;DGQDAIAQS(0.996)PEKES(0.004)K;DGQDAIAQS(1)PEKESK;DGQDAIAQS(0.604)PEKES(0.396)K;DGQDAIAQS(0.999)PEKES(0.001)K 154.52 0.00088579 635064000 25407.2 33580.4 32803 29807.6 18678.8 17377.5 20538 21865.7 25961.5 19757 TRUE FALSE 23246.18422 31394.30986 30576.42375 32103.38652 17934.78384 18361.39903 19167.94749 21674.53049 28660.29083 22204.64632 1.046906305 1.413862189 1.377028182 1.445795896 0.807704099 0.826916978 0.863240388 0.976125905 1.290733949 1 14.43857397 -6.259073747 24.99686846 0.948022359 1.331547727 0.538592294 0.16291225 164.7611739 1740974.895 0.050974285 0.062670526 5.51E-07 6.259073747 0.383525369 DGQDAIAQS(ph)PEKESK ddPTM_A459_MK2206_30min_R2 7 DGQDAIAQSPEKESK 15 1 Q9NWH9;H7BXE3;H0YL55 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(1)PEKESK;DGQDAIAQS(1)PEKESK;DGQDAIAQS(1)PEKESK;DGQDAIAQS(0.998)PEKES(0.002)K;DGQDAIAQS(0.999)PEKES(0.001)K;DGQDAIAQS(1)PEKESK;DGQDAIAQS(1)PEKESK 218.36 1.36E-08 856890800 334601 374437 371123 321022.6 333407 198653.3 436974 314197.5 229133.9 377175 TRUE FALSE 360218.3098 355843.0031 383496.0556 294794.0267 320315.7659 206213.1905 379598.7889 355264.1921 249063.5524 364867.8106 0.987257027 0.975265542 1.051054778 0.807947476 0.877895382 0.56517233 1.040373466 0.973679184 0.682613114 1 18.47701435 -5.764023229 24.99979245 0.845840126 1.001599769 0.20981378 0.137541705 106.3158181 1028665.498 0.038391558 0.060046282 1.72E-06 5.764023229 0.155759643 DGQHYGDDR ddPTM_A459_MK2206_30min_R2 1 DGQHYGDDR 9 0 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 0 89.029 0.042729 7339500 62759 39139 49244 55646 71645 52284 63749 173700 127490 67712 FALSE TRUE 67563.87729 37195.41417 50885.77038 51099.5438 68831.85731 54273.70426 55378.67972 196403.1864 138578.8498 65502.56299 1.031469216 0.567846699 0.776851593 0.780115181 1.050826932 0.82857375 0.845442945 2.998404604 2.115624846 1 15.99926374 -7.735411693 24.83948202 2.167760698 0.832599181 0.571652793 0.471132991 117.4491223 112087.5116 0.207920922 0.119991063 1.84E-08 7.735411693 -1.335161517 DGQPCMDHDR ddPTM_A459_MK2206_30min_R1 1 DGQPCMDHDR 10 0 A0A6I8PTV8;A0A6I8PIP7;A0A6I8PS05;A0A6I8PLB8;A0A6I8PRS0;A0A6I8PL42;B4DER1;A0A6I8PIT3;A0A6I8PIV1;Q9P2J5-2;Q9P2J5;A0A6I8PRU9;A0A6I8PLB3 A0A6I8PTV8 LARS "Leucine--tRNA ligase, cytoplasmic" 0 125.72 0.0060894 0 1982 1988.7 2335.9 1959.9 2283.6 1897.1 2441.4 1772.4 1281.3 1763.5 FALSE TRUE 1813.420492 1859.235269 2177.345616 2110.851838 2192.639376 2004.512163 2278.538661 1756.904094 1414.49572 1981.975694 0.914955969 0.93807168 1.098573319 1.065024079 1.106289741 1.011370709 1.149629972 0.886440787 0.71367965 1 10.95272355 -7.92216359 6.996272908 0.838364992 1.040641093 0.415396457 0.094376585 0.18523155 13.59043185 0.051883462 0.024652787 1.20E-08 7.92216359 0.202276101 DGQS(ph)SPQPSPR ddPTM_A459_MK2206_30min_R1 1 DGQSSPQPSPR 11 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 DGQS(0.5)S(0.5)PQPSPR 110.15 0.00729 0 675.43 657.11 774.23 504.06 670.67 537.15 701.19 762.54 551.94 726.54 TRUE FALSE 617.9811317 614.3320196 721.6774247 542.8827885 643.9557937 567.5629688 654.4148945 755.8731932 609.3161381 816.5492603 0.756820393 0.752351449 0.883813702 0.664850016 0.788630674 0.69507499 0.801439578 0.925692092 0.746208671 1 9.673396112 -9.380894482 0.456538843 1.02292663 0.759305732 0.457533319 0.073370288 3.146533259 0.93085436 0.219293988 0.041915158 4.16E-10 9.380894482 -0.263620898 DGQSS(ph)PQPSPR ddPTM_A459_MK2206_30min_R2 3 DGQSSPQPSPR 11 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 DGQS(0.08)S(0.919)PQPSPR;DGQS(0.198)S(0.802)PQPSPR;DGQS(0.227)S(0.77)PQPS(0.002)PR 126.5 0.0031469 76651200 41845 56022 49566 55562 53099 54663 54082 47142 52742 48536 TRUE FALSE 45048.68537 53240.02894 51218.5057 51022.40687 51014.06646 56743.23877 46980.96844 53303.62126 57329.40382 46952.27429 0.959456939 1.133918 1.090863147 1.08668659 1.086508955 1.208530143 1.000611134 1.135272403 1.221014417 1 15.51890742 -4.755679068 24.95855396 1.109333964 0.959456693 0.286353931 0.069813476 232.1423049 1005732.887 0.016564024 0.143167644 1.76E-05 4.755679068 -0.149877271 DGQVINETS(ph)QHHDDLE ddPTM_A459_MK2206_30min_R1 3 DGQVINETSQHHDDLE 16 0 P08670 P08670 VIM Vimentin 1 DGQVINET(0.098)S(0.902)QHHDDLE;DGQVINET(0.112)S(0.888)QHHDDLE;DGQVINET(0.157)S(0.843)QHHDDLE 131.72 0.00067937 164606900 8162.4 7849.3 7284.3 7076 8082.57 6527.92 8057.03 7225.58 6463.48 5745.66 TRUE FALSE 7468.145018 7338.309143 6789.862011 7620.994746 7760.624122 6897.525189 7519.56023 7162.407516 7135.381876 6457.475738 1.15651151 1.136405221 1.051473097 1.180181708 1.201804612 1.068145738 1.164473632 1.109165223 1.104980052 1 12.6567546 -8.989466854 0.961716179 0.999616182 1.135754944 0.453706295 0.044315962 1.528976213 2.189557462 0.043854831 0.014031401 1.02E-09 8.989466854 0.136138762 DGQVINETS(ph)QHHDDLE ddPTM_A459_MK2206_30min_R2 3 DGQVINETSQHHDDLE 16 0 P08670 P08670 VIM Vimentin 1 DGQVINET(0.336)S(0.664)QHHDDLE;DGQVINET(0.24)S(0.76)QHHDDLE;DGQVINET(0.188)S(0.812)QHHDDLE 180.08 6.83E-07 389794900 1583152 1812734 1656082 1973786 1948390 1716910 1723961 1247473 1442304 1413163 TRUE FALSE 1704359.334 1722716.266 1711294.947 1812521.37 1871886.419 1782248.213 1497602.85 1410522.004 1567752.995 1367051.607 1.246741034 1.260169153 1.251814444 1.325861702 1.369287311 1.303716849 1.095498401 1.031798651 1.146813322 1 20.38263628 -7.298139964 4.996953997 1.067941677 1.294951244 0.832401247 0.04941351 0.083983555 5.402386878 0.021954673 0.014954018 5.03E-08 7.298139964 0.227009567 DGQVINETSQHHDDLE ddPTM_A459_MK2206_30min_R1 12 DGQVINETSQHHDDLE 16 0 P08670 P08670 VIM Vimentin 0 ;;;;;;;;;;; 168.1 1.91E-05 437172000 98920.4 77576.5 88985.8 68970 118956.5 111959 109229.9 91408.8 68219.3 64630.7 FALSE TRUE 90506.70053 72526.25575 82945.69182 74282.08135 114218.2107 118298.0218 101943.3727 90609.6225 75310.94036 72637.63905 1.246002785 0.99846659 1.141910625 1.022638983 1.572438369 1.628604996 1.403451076 1.247419708 1.036803252 1 16.14842969 -6.237040718 24.7553626 1.347281432 1.097673853 0.203411412 0.199849398 1023.199736 1038158.121 0.061899332 0.079870456 5.79E-07 6.237040718 -0.249607578 DGQVINETSQHHDDLE ddPTM_A459_MK2206_30min_R2 3 DGQVINETSQHHDDLE 16 0 P08670 P08670 VIM Vimentin 0 ;; 152.07 0.00025681 390446000 507896 1183200 864060 1489770 1561740 1751240 1508010 901890 1333150 873690 FALSE TRUE 546780.9083 1124444.009 892867.3291 1368051.025 1500418.24 1817884.665 1310006.476 1019770.12 1449104.977 845181.5669 0.646938989 1.330417099 1.056420732 1.618647494 1.775261434 2.150880635 1.549970476 1.206569286 1.714548724 1 19.68890178 -4.660963983 0.96195603 1.598041851 0.079888578 0.395844948 0.326181108 2.546350487 1.607072832 0.11300702 4.258799734 2.18E-05 4.660963983 -1.518153273 DGQWFTDWDAVPHSR ddPTM_A459_MK2206_30min_R1 1 DGQWFTDWDAVPHSR 15 0 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 0 96.544 0.014197 3155600 1604.3 1473.8 1716.9 1417.7 1538 1156.1 1284 1450.2 1216.2 945.49 FALSE TRUE 1467.84586 1377.855352 1600.361612 1526.8915 1476.738203 1221.557383 1198.346703 1437.521054 1342.628342 1062.624439 1.381340205 1.296653174 1.506046306 1.436906063 1.389708488 1.14956643 1.127723642 1.352802553 1.263502224 1 10.05341608 -6.738003446 11.70488327 1.197590273 1.404059875 0.555515459 0.09919815 0.569692644 281.7418699 0.033574558 0.033252868 1.83E-07 6.738003446 0.206469602 DGQWFTDWDAVPHSR ddPTM_A459_MK2206_30min_R2 1 DGQWFTDWDAVPHSR 15 0 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 0 91.14 0.020852 3256000 11198 19326 17742 21546 16354 16963 19353 12200 15115 15537 FALSE TRUE 12055.32749 18366.29894 18333.50942 19785.62288 15711.85979 17608.53885 16811.92785 13794.58189 16429.67538 15030.02896 0.802082785 1.221973623 1.219792022 1.316406171 1.045364572 1.171557214 1.118555919 0.917801418 1.093123335 1 13.87556017 -7.614814922 7.531654784 1.004813269 1.142691521 0.146010582 0.135702228 0.420547789 29.75732618 0.064039625 0.036739781 2.43E-08 7.614814922 0.137878253 DGRHPQGEQMYR ddPTM_A459_MK2206_30min_R1 2 DGRHPQGEQMYR 12 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 105.2 0.0075033 6696000 2186 2069 1934.89 2448.4 3016 2200.6 2021.79 2343.8 749.91 437.32 FALSE TRUE 2000.069221 1934.307724 1803.555058 2636.976192 2895.866334 2325.19607 1886.920078 2323.308404 827.8658281 491.4985032 4.06932922 3.935531261 3.669502645 5.365176445 5.891912823 4.73083042 3.839116632 4.726989784 1.684371006 1 8.941043213 -8.33102292 3.873859827 1.05484057 4.545180869 0.783738476 0.672197681 0.11150713 3.091000173 0.708213043 0.191234761 4.67E-09 8.33102292 3.4903403 DGRHPQGEQMYR ddPTM_A459_MK2206_30min_R2 2 DGRHPQGEQMYR 12 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 84.507 0.025911 2665800 6232.9 19038.6 11554.5 15115.4 21618.6 15929.8 13065.8 11399.6 17829.9 10008.2 FALSE TRUE 6710.095616 18093.17081 11939.72126 13880.42347 20769.74514 16536.0197 11350.24477 12889.56686 19380.71247 9681.633254 0.693074757 1.868813901 1.233234202 1.433686146 2.145272868 1.70797832 1.172348143 1.331342194 2.001801965 1 13.24103473 -6.006082435 24.7220716 1.584857173 1.326758502 0.081966373 0.422336942 702.9068467 2856997.455 0.119336692 0.170443801 9.86E-07 6.006082435 -0.258098671 DGS(ph)FGEGLTMK ddPTM_A459_MK2206_30min_R1 1 DGSFGEGLTMK 11 0 Q9ULT0;Q9ULT0-4;G5E9G4 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 DGS(1)FGEGLTMK 140.45 0.0010849 14375000 2678.3 3200.5 3648 2941.2 1844.7 2352.4 2621.8 2210.3 3731.7 3701.7 TRUE FALSE 2450.496521 2992.146868 3400.383924 3167.731734 1771.221693 2485.590855 2446.904506 2190.97558 4119.623569 4160.294542 0.589019959 0.719215151 0.817342111 0.761420063 0.425744301 0.5974555 0.588156555 0.526639534 0.990224016 1 12.02246996 -8.272792019 24.23211367 0.995112178 0.632810442 0.647111341 0.108358729 373.6000748 797433.4051 0.11098231 0.029756336 5.34E-09 8.272792019 -0.362301737 DGS(ph)FGEGLTMK ddPTM_A459_MK2206_30min_R2 2 DGSFGEGLTMK 11 0 Q9ULT0;Q9ULT0-4;G5E9G4 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 DGS(1)FGEGLTMK;DGS(1)FGEGLTMK 112.02 0.0079105 14174200 30886.2 40626 33807.3 32830.3 35094 26123.7 49708 31300.4 29433.5 38261.5 TRUE FALSE 33250.87122 38608.57192 34934.41851 30147.95947 33716.03323 27117.85571 43181.27989 35391.46975 31993.57263 37013.03039 0.898355819 1.043107563 0.943841078 0.814522863 0.910923339 0.732656997 1.166650756 0.956189466 0.864386739 1 15.17574564 -7.258252249 24.9995288 0.993155855 0.897391728 0.202033477 0.10279825 553.4368138 4341124.17 0.041953407 0.031060777 5.52E-08 7.258252249 -0.095764127 DGSIS(ph)PVSSECSVVER ddPTM_A459_MK2206_30min_R1 1 DGSISPVSSECSVVER 16 0 H0YCZ0;H7BY22;H0YEM9;Q8NCP5-3;Q8NCP5-4;Q8NCP5-2;Q8NCP5 H0YCZ0 ZBTB44 Zinc finger and BTB domain-containing protein 44 1 DGS(0.031)IS(0.967)PVS(0.002)SECSVVER 211.45 3.76E-08 18039000 3999.1 4786.8 4750.4 3494.2 4739.9 4123.9 4585.2 4178 3448.8 3673.4 TRUE FALSE 3658.955545 4475.17845 4427.956083 3763.323889 4551.099746 4357.391654 4279.329674 4141.472186 3807.315102 4128.488525 0.886270005 1.083975025 1.072536851 0.911550042 1.102364635 1.055444778 1.036536652 1.003144895 0.922205567 1 12.01139798 -8.039041658 6.767676612 0.960998598 1.025495161 0.103149573 0.069251015 0.468366199 61.89068767 0.044672931 0.017277714 9.14E-09 8.039041658 0.064496562 DGSIS(ph)PVSSECSVVER ddPTM_A459_MK2206_30min_R2 2 DGSISPVSSECSVVER 16 0 H0YCZ0;H7BY22;H0YEM9;Q8NCP5-3;Q8NCP5-4;Q8NCP5-2;Q8NCP5 H0YCZ0 ZBTB44 Zinc finger and BTB domain-containing protein 44 1 DGS(0.003)IS(0.996)PVS(0.001)SECSVVER;DGSIS(0.941)PVS(0.056)S(0.003)ECSVVER 223.68 3.45E-11 31459000 32867 44084 41327 42566 37559 38494 46186 34221 34429 39778 TRUE FALSE 35383.32279 41894.85266 42704.82155 39088.22164 36084.24494 39958.91614 40121.72272 38693.8022 37423.57219 38480.04712 0.919523895 1.088742239 1.109791301 1.015804932 0.937739105 1.0384321 1.042663035 1.005554959 0.972544864 1 15.23182295 -5.986352743 24.98933959 1.001408917 1.047375901 0.090301963 0.054709929 515.3545025 943651.9205 0.015653419 0.023203029 1.03E-06 5.986352743 0.045966984 DGSISPVS(ph)SECSVVER ddPTM_A459_MK2206_30min_R1 1 DGSISPVSSECSVVER 16 0 H0YCZ0;H7BY22;H0YEM9;Q8NCP5-3;Q8NCP5-4;Q8NCP5-2;Q8NCP5 H0YCZ0 ZBTB44 Zinc finger and BTB domain-containing protein 44 1 DGS(0.038)IS(0.163)PVS(0.756)S(0.033)ECS(0.009)VVER 208.85 5.94E-08 18681000 1353.8 1566 1596.9 1207.2 1146.9 1543.5 1135.9 1268.1 1121.1 1038.9 TRUE FALSE 1238.652201 1464.053115 1488.506877 1300.178753 1101.216544 1630.891636 1060.126184 1257.013135 1237.642357 1167.606775 1.060847048 1.253892275 1.274835766 1.113541631 0.943139906 1.39678158 0.907947955 1.07657232 1.059982164 1 10.18933877 -7.236908156 0.618806403 1.007538301 1.185917575 0.155166815 0.135373705 1.495486953 1.168242602 0.120098789 0.088592022 5.80E-08 7.236908156 0.178379274 DGT(ph)SPEEEIEIER ddPTM_A459_MK2206_30min_R1 2 DGTSPEEEIEIER 13 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 DGT(0.5)S(0.5)PEEEIEIER;DGT(0.5)S(0.5)PEEEIEIER 244.71 5.19E-18 41317000 6453.8 6418.7 7191.6 5689 5643.2 5048.1 6454.5 5807.3 5960.5 6028.8 TRUE FALSE 5904.87042 6000.841463 6703.454229 6127.167766 5418.419394 5333.91906 6023.932082 5756.527388 6580.115305 6775.693259 0.871478415 0.885642433 0.989338503 0.904286474 0.799684872 0.787213774 0.889050294 0.849585005 0.971135359 1 12.72615285 -8.371551851 4.367359976 0.997607504 0.872905192 0.423732089 0.053273198 0.242470148 7.163335584 0.057155704 0.01504167 4.25E-09 8.371551851 -0.124702312 DGT(ph)SPEEEIEIER ddPTM_A459_MK2206_30min_R2 1 DGTSPEEEIEIER 13 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 DGT(0.5)S(0.5)PEEEIEIER 219.84 3.10E-08 23863000 59158 48189 46598 57493 53556 34600 53644 35823 43780 45811 TRUE FALSE 63687.18196 45796.00433 48151.55406 52795.63799 51453.12234 35916.72725 46600.47836 40505.1891 47587.90526 44316.19082 1.437108668 1.033392164 1.086545418 1.191339712 1.16104569 0.810465128 1.051545214 0.914004303 1.073826617 1 15.43554626 -6.656814227 10.49788922 0.969821304 1.169715596 0.435913478 0.12016728 0.346852661 32.27954273 0.038296948 0.038283089 2.20E-07 6.656814227 0.199894292 DGTAPPPQSPGSPGT(ph)GQDEEWSDEESPRK ddPTM_A459_MK2206_30min_R1 1 DGTAPPPQSPGSPGTGQDEEWSDEESPRK 29 1 A0A0C4DGG1;Q9UKS6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 DGTAPPPQSPGS(0.003)PGT(0.497)GQDEEWS(0.497)DEES(0.002)PRK 98.015 1.65E-07 6788500 1499.1 1841.1 1398.4 1430.1 1824.3 1543.2 2020.1 1642.9 1255.5 1117.2 TRUE FALSE 1371.593673 1721.244055 1303.480504 1540.24655 1751.634268 1630.57465 1885.342815 1628.536299 1386.013718 1255.60717 1.092374833 1.370845991 1.038127636 1.226694611 1.39504959 1.298634389 1.501538745 1.297010989 1.103859352 1 10.29416946 -4.735365454 24.2203016 1.264135607 1.0923736 0.076370778 0.15332786 4417.076845 4102743.783 0.038162018 2.766969739 1.84E-05 4.735365454 -0.171762007 DGTAPPPQSPGSPGTGQDEEWS(ph)DEESPRK ddPTM_A459_MK2206_30min_R2 4 DGTAPPPQSPGSPGTGQDEEWSDEESPRK 29 1 A0A0C4DGG1;Q9UKS6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 DGTAPPPQSPGSPGT(0.001)GQDEEWS(0.999)DEESPRK;DGTAPPPQSPGS(0.002)PGT(0.149)GQDEEWS(0.847)DEES(0.002)PRK;DGTAPPPQSPGSPGT(0.059)GQDEEWS(0.939)DEES(0.001)PRK;DGTAPPPQSPGSPGT(0.002)GQDEEWS(0.998)DEES(0.001)PRK 106.76 7.65E-11 88504000 169324 198212 197211 207004 206829 174033 224801 159206 173078 212996 TRUE FALSE 182287.5756 188369.0803 203785.9163 190091.111 198707.8542 180655.9478 195284.3587 180014.7708 188132.0116 206045.958 0.884693771 0.914209054 0.989031371 0.922566562 0.964386083 0.876775014 0.947770879 0.873663199 0.913058492 1 17.65260664 -11.39589347 2.383199386 1.038865863 0.92196663 0.305007546 0.035871456 19177828.68 10377926.72 4208598.724 0.009315412 4.02E-12 11.39589347 -0.116899234 DGTDTS(ph)QSGEDGGCWQR ddPTM_A459_MK2206_30min_R2 2 DGTDTSQSGEDGGCWQR 17 0 Q9NPI1-2;Q9NPI1 Q9NPI1-2 BRD7 Bromodomain-containing protein 7 1 DGTDT(0.021)S(0.979)QSGEDGGCWQR;DGT(0.002)DT(0.04)S(0.958)QSGEDGGCWQR 220.97 5.51E-12 9972600 22817.3 27238 27411 26011 29431 21750.7 29457 22840 18479.7 26602 TRUE FALSE 24564.21003 25885.40053 28324.86906 23885.81809 28275.39106 22578.43813 25589.26052 25825.26642 20087.0309 25733.97892 0.9545438 1.005884112 1.100679734 0.928182081 1.098757062 0.877378434 0.994376369 1.003547353 0.78056452 1 14.65138692 -6.772103037 24.99878943 0.935345249 1.016604803 0.221729599 0.080769026 354.7032997 831524.877 0.027311661 0.024329534 1.69E-07 6.772103037 0.081259554 DGTS(ph)PEEEIEIER ddPTM_A459_MK2206_30min_R2 1 DGTSPEEEIEIER 13 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 DGT(0.052)S(0.948)PEEEIEIER 142.39 0.00077791 22236000 37891 35711 36960 36503 39693 44048 39586 32781 38771 41693 TRUE FALSE 40791.96409 33937.64367 38192.22795 33520.58813 38134.45338 45724.27751 34388.31065 37065.58925 42143.2315 40332.56082 1.011390382 0.841445298 0.946932879 0.83110488 0.945500424 1.133681486 0.852619074 0.918999153 1.044893521 1 15.29965739 -6.521138848 24.98534262 0.98340998 0.90360023 0.173767039 0.083968591 124.106793 1782243.977 0.027269953 0.027661359 3.01E-07 6.521138848 -0.079809751 DGVLTLANNVT(ph)PAK ddPTM_A459_MK2206_30min_R1 1 DGVLTLANNVTPAK 14 0 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DGVLT(0.003)LANNVT(0.997)PAK 158.65 0.00071128 13575000 3369.4 2961.3 2820.6 2568.8 2438.7 2151.7 3028.3 2056.6 3510 3775 TRUE FALSE 3082.814837 2768.518832 2629.145531 2766.649421 2341.561415 2273.527395 2826.287632 2038.619363 3874.877061 4242.6755 0.726620463 0.652540792 0.61969046 0.652100172 0.55190679 0.535871149 0.666156917 0.480503249 0.913309788 1 12.05075862 -8.397169058 5.028466977 0.994663969 0.611912459 0.804423571 0.068703695 0.087888171 2.988364195 0.066025607 0.017207786 4.01E-09 8.397169058 -0.38275151 DGVLTLANNVT(ph)PAK ddPTM_A459_MK2206_30min_R2 2 DGVLTLANNVTPAK 14 0 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DGVLT(0.009)LANNVT(0.991)PAK;DGVLTLANNVT(1)PAK 149.6 0.0010219 32419000 186098 122378 127305 115810 116253 97920 152676 109265 77084 145073 TRUE FALSE 200345.806 116300.8865 131549.2852 106347.9525 111688.3231 101646.4142 132629.4578 123546.3107 83788.62698 140339.2799 1.42758183 0.828712293 0.937366112 0.757791779 0.795845063 0.72429055 0.945062978 0.880340207 0.597043301 1 17.09855934 -4.761381749 9.635820831 0.826062545 1.430610254 0.715164286 0.113195127 0.039236347 65.90381961 0.027077093 0.153951349 1.73E-05 4.761381749 0.604547709 DGVLTLANNVT(ph)PAKDVPPLSETEATPVPIK ddPTM_A459_MK2206_30min_R2 2 DGVLTLANNVTPAKDVPPLSETEATPVPIK 30 1 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DGVLT(0.009)LANNVT(0.991)PAKDVPPLSETEATPVPIK;DGVLT(0.085)LANNVT(0.883)PAKDVPPLS(0.013)ET(0.013)EAT(0.007)PVPIK 78.978 3.90E-05 13795000 93846 73161 63218 64304 62613 52453 86906 66295 48710 86755 TRUE FALSE 101030.9219 69527.93113 65325.65657 59050.1575 60154.49901 54449.13567 75495.13781 74959.98412 52946.70775 83924.19145 1.203835511 0.828461138 0.77838887 0.703613064 0.716771862 0.648789517 0.899563481 0.893186849 0.630887314 1 16.35679911 -4.752218186 3.487276465 0.775106922 1.272279883 0.554665577 0.111950468 0.243290864 4.627916987 0.027786051 0.335494118 1.77E-05 4.752218186 0.497172961 DGVY(ph)DVPLHNPPDAK ddPTM_A459_MK2206_30min_R2 2 DGVYDVPLHNPPDAK 15 0 A0A087WUD2;Q14511-3;Q14511 A0A087WUD2 NEDD9 Enhancer of filamentation 1;Enhancer of filamentation 1 p55 1 DGVY(1)DVPLHNPPDAK;DGVY(1)DVPLHNPPDAK 193.15 0.00043065 1803000 42062 35812 39615 37904 38116 25840 38710 24076 23231 37322 TRUE FALSE 45282.29906 34033.62816 40935.74433 34807.12195 36619.37432 26823.35931 33627.3305 27222.81587 25251.59039 36104.1862 1.254211875 0.942650472 1.133822657 0.964074408 1.014269485 0.742943191 0.931396994 0.754007187 0.699408934 1 15.1398785 -6.320441192 1.003422506 0.808718852 1.110739831 0.502743739 0.117414856 0.432746695 0.92447651 0.052557651 0.076540773 4.78E-07 6.320441192 0.302020978 DGWNQNHFITPVS(ph)TLER ddPTM_A459_MK2206_30min_R1 2 DGWNQNHFITPVSTLER 17 0 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 DGWNQNHFIT(0.001)PVS(0.754)T(0.246)LER;DGWNQNHFIT(0.001)PVS(0.85)T(0.149)LER 149.8 0.00018852 28279000 10417.9 8642.4 6952.3 6309.9 7808.9 8186.2 8578.7 7116.3 9093.7 7576.2 TRUE FALSE 9531.802898 8079.778189 6480.397246 6795.889591 7497.854977 8649.69557 8006.430576 7054.082939 10039.02266 8514.796853 1.119439848 0.948910271 0.761074792 0.798127038 0.880567688 1.015842858 0.940296135 0.82844994 1.179009063 1 13.0557564 -6.750235922 24.56636771 0.978721254 0.890692815 0.115225649 0.121321978 436.8233029 957841.9217 0.041786278 0.041403668 1.78E-07 6.750235922 -0.088028439 DGWNQNHFITPVS(ph)TLER ddPTM_A459_MK2206_30min_R2 2 DGWNQNHFITPVSTLER 17 0 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 DGWNQNHFIT(0.001)PVS(0.726)T(0.273)LER;DGWNQNHFIT(0.003)PVS(0.821)T(0.176)LER 103.28 0.0021464 21760000 98639 81793 74289 90482 61232 81039 87384 75254 76439 69674 TRUE FALSE 106190.8777 77731.27856 76765.75818 83089.33116 58827.72401 84122.99593 75910.37583 85089.95619 83087.52605 67400.54309 1.575519615 1.153273772 1.138948659 1.232769461 0.872807864 1.24810561 1.126257629 1.262452086 1.232742679 1 16.0404726 -4.761439164 7.397490056 1.145889622 1.582904542 0.556458684 0.11636903 0.07707919 28.82740176 0.028279664 0.168861911 1.73E-05 4.761439164 0.437014921 DGWS(ph)LDR ddPTM_A459_MK2206_30min_R1 2 DGWSLDR 7 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 DGWS(1)LDR;DGWS(1)LDR 96.665 0.022999 5186800 3574 3463 3719.2 2730.7 3429.6 3081.7 4447 3190.1 4408.3 5028.4 TRUE FALSE 3270.012532 3237.558071 3466.751066 2941.018987 3292.99177 3256.183191 4150.348744 3162.209292 4866.55856 5651.356154 0.578624394 0.57288162 0.613437018 0.520409422 0.58269054 0.576177311 0.734398723 0.559548754 0.861131103 1 12.4643814 -8.419525601 2.967953288 0.999115102 0.592772727 0.866265913 0.054309044 0.080104741 1.369206812 0.052604743 0.014160764 3.81E-09 8.419525601 -0.406342375 DGWS(ph)LDRDR ddPTM_A459_MK2206_30min_R1 2 DGWSLDRDR 9 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 DGWS(1)LDRDR;DGWS(1)LDRDR 149.94 0.0065144 8554500 7348.1 7184.6 8779.2 6908.8 7416.4 7763.7 9315.6 7435.9 9336.3 7773.9 TRUE FALSE 6723.105509 6716.881234 8183.292364 7440.916973 7120.989084 8203.273985 8694.173321 7370.88871 10306.8418 8736.989422 0.769499101 0.768786696 0.936626104 0.85165686 0.815039225 0.938913119 0.995099445 0.843641712 1.179678868 1 13.09292053 -7.027815534 0.501871986 1.048409464 0.789541838 0.503503183 0.085175183 0.867329419 0.469140234 0.078653114 0.083719847 9.38E-08 7.027815534 -0.258867626 DGWS(ph)LDRDR ddPTM_A459_MK2206_30min_R2 1 DGWSLDRDR 9 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 DGWS(1)LDRDR 117.14 0.036209 7675400 52436 61203 56678 57428 63741 53949 66385 45835 38377 59369 TRUE FALSE 56450.54048 58163.74802 58567.61623 52735.9487 61238.20807 56002.067 57668.56976 51825.79188 41714.96209 57431.79439 0.982914448 1.012744746 1.019776882 0.918236131 1.066277116 0.975105646 1.004122723 0.902388519 0.726339174 1 15.80956202 -7.892079069 4.302336442 0.849042863 0.997075587 0.378482206 0.071217075 0.187426265 6.060121808 0.038957397 0.017597105 1.28E-08 7.892079069 0.148032723 DGYDYDGYR ddPTM_A459_MK2206_30min_R1 3 DGYDYDGYR 9 0 J3KTL2;Q07955;Q07955-3;Q07955-2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 0 ;; 166.52 0.012507 103231000 9559.3 9588.1 9923.2 8738.5 9870.8 8642.7 9687 8690.5 8085.7 7265.6 FALSE TRUE 8746.231337 8963.912947 9249.640832 9411.540784 9477.625134 9132.042205 9040.797905 8614.519875 8926.23745 8165.71738 1.071091605 1.097749595 1.13274075 1.152567539 1.160660441 1.118339244 1.107165174 1.054961796 1.093135732 1 12.99536392 -8.506273959 0.775547081 1.003331789 1.124197859 0.607216931 0.028586828 0.502204898 0.681500863 0.030271142 0.011368909 3.12E-09 8.506273959 0.12086607 DGYGGS(ph)RDSYSSSR ddPTM_A459_MK2206_30min_R1 2 DGYGGSRDSYSSSR 14 1 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 1 DGYGGS(0.883)RDS(0.117)YSSSR;DGYGGS(0.772)RDS(0.228)YSSSR 152.94 0.00177 6483200 3244.3 2503.99 3357.6 2965.8 3840.7 2974.5 3239.7 2946.6 2051.5 1727.27 TRUE FALSE 2968.355249 2340.979796 3129.695467 3194.22643 3687.716786 3142.913619 3023.585524 2920.838187 2264.760766 1941.257248 1.529089075 1.205909108 1.612200274 1.645442114 1.89965384 1.619009342 1.557539851 1.504611607 1.166646393 1 10.9227756 -8.330841265 2.132201093 1.000508647 1.584705404 0.613837524 0.158756184 0.224324748 1.954001519 0.167114749 0.047604865 4.67E-09 8.330841265 0.584196757 DGYGGS(ph)RDSYSSSR ddPTM_A459_MK2206_30min_R2 2 DGYGGSRDSYSSSR 14 1 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 1 DGYGGS(0.92)RDS(0.08)YSSSR;DGYGGS(0.912)RDS(0.087)YS(0.001)SSR 142.19 0.002602 2465500 13958 23028 16360.7 18914.8 19479.9 19054.4 19604.4 15170.5 17683.6 18436.3 TRUE FALSE 15026.63521 21884.46301 16906.15757 17369.40033 18715.02125 19779.52854 17030.31873 17153.33644 19221.68756 17834.72504 0.842549306 1.22707039 0.947934859 0.973909062 1.049358552 1.109045892 0.954896624 0.961794275 1.07776753 1 14.12240135 -10.69195793 3.853292051 0.999991082 1.01932321 0.001321891 0.100695098 9.86E-06 2.13E-06 0.091559682 0.022192539 2.03E-11 10.69195793 0.019332127 DGYGGSRDS(ph)YSSSR ddPTM_A459_MK2206_30min_R1 3 DGYGGSRDSYSSSR 14 1 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 1 DGY(0.001)GGS(0.016)RDS(0.827)Y(0.005)S(0.043)S(0.064)S(0.043)R;DGYGGS(0.333)RDS(0.667)YSSSR;DGYGGS(0.041)RDS(0.957)YS(0.001)S(0.001)SR 201.4 0.00028024 100502000 7969.3 9141 8448.7 8018.02 10759.79 10352.3 10482.9 8330.84 8034.94 6834.45 TRUE FALSE 7291.469187 8545.919239 7875.225783 8635.56929 10331.20478 10938.43828 9783.604868 8258.004344 8870.200766 7681.153263 0.949267504 1.11258283 1.025266065 1.124254261 1.345006983 1.424061974 1.273715617 1.075099541 1.154800648 1 12.90710722 -6.008340737 5.391371889 1.2304893 1.041477129 0.303341555 0.122233177 0.21460302 20.51011634 0.037912941 0.053175501 9.81E-07 6.008340737 -0.189012172 DGYGGSRDS(ph)YSSSR ddPTM_A459_MK2206_30min_R2 1 DGYGGSRDSYSSSR 14 1 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 1 DGYGGS(0.004)RDS(0.996)YSSSR 130.47 0.0045972 5298500 13706 20798 17991 21604 18809 16536 18745 15651 15780 17871 TRUE FALSE 14755.3419 19765.20156 18590.81096 19838.88409 18070.46415 17165.28907 16283.75898 17696.63944 17152.51588 17287.87073 0.853508343 1.143298783 1.075367305 1.147560877 1.045268352 0.992909383 0.941918136 1.023644827 0.99217053 1 14.07747257 -6.700578457 4.351725837 0.988259893 1.066106514 0.13196638 0.078445198 0.378633371 14.34951922 0.026489221 0.025849656 1.99E-07 6.700578457 0.077846621 DGYNYTLSK ddPTM_A459_MK2206_30min_R2 1 DGYNYTLSK 9 0 P31949 P31949 S100A11 "Protein S100-A11;Protein S100-A11, N-terminally processed" 0 142 0.029894 13198000 29531 33584 29275 36809 36007 32677 36431 28584 28990 29377 FALSE TRUE 31791.91607 31916.2674 30251.01389 33801.58695 34593.18426 33920.54613 31647.56594 32320.02694 31511.4978 28418.4309 1.118707651 1.123083379 1.064485721 1.189424817 1.217279884 1.193610803 1.113628196 1.137291044 1.108840172 1 14.79453928 -8.859872858 1.190320468 1.000097204 1.147749997 0.513168182 0.042566659 1.075736471 2.534973984 0.045644898 0.013974408 1.38E-09 8.859872858 0.147652793 DHALLEEQSK ddPTM_A459_MK2206_30min_R2 1 DHALLEEQSK 10 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 113.67 0.010518 6667600 113320 126350 129750 142840 128620 108390 150910 117000 101780 137780 FALSE TRUE 121995.8663 120075.6427 134075.8002 131169.5151 123569.7325 112514.8574 131095.3357 132292.3017 110632.6404 133284.2499 0.915305945 0.900898965 1.005938814 0.984133648 0.927114289 0.844172192 0.983577098 0.992557649 0.830050366 1 17.02414678 DHANYEEDENGDIT(ph)PIK ddPTM_A459_MK2206_30min_R2 1 DHANYEEDENGDITPIK 17 0 H3BSB3;H3BNT4;Q99547 H3BSB3 MPHOSPH6 M-phase phosphoprotein 6 1 DHANYEEDENGDIT(1)PIK 140.95 0.00068138 32345000 166320 179000 142990 156530 169010 117000 163750 126060 116910 159380 TRUE FALSE 179053.5871 170111.1203 147757.2152 143740.9983 162373.8182 121452.517 142249.4283 142536.4748 127078.6205 154179.4437 1.161332424 1.103332041 0.958345754 0.932296776 1.053148295 0.787734824 0.92262253 0.924484299 0.824225444 1 17.2342509 -4.648108478 0.701688435 0.901206551 1.39176648 0.581265124 0.071602464 2.43763748 0.79972314 0.029795138 0.993154534 2.25E-05 4.648108478 0.490559928 DHAPSIPT(ph)SPFGDSLESSTELR ddPTM_A459_MK2206_30min_R1 2 DHAPSIPTSPFGDSLESSTELR 22 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPSIPT(0.83)S(0.17)PFGDSLESSTELR;DHAPS(0.022)IPT(0.54)S(0.438)PFGDSLESSTELR 193.93 7.53E-22 33146500 5365.3 5154.4 4451.9 3325 4100.7 4849.9 4733 4051 4633.2 5585.2 TRUE FALSE 4908.953061 4818.847623 4149.717432 3581.092076 3937.360436 5124.497147 4417.270206 4015.582534 5114.83772 6277.136742 0.78203698 0.767682436 0.661084441 0.5704977 0.627254208 0.816374942 0.703707819 0.639715638 0.814836116 1 12.61589092 -8.569678575 3.878610429 0.999794074 0.695711023 0.628906589 0.072228438 0.169112858 7.617966558 0.075654407 0.019849146 2.69E-09 8.569678575 -0.304083051 DHAPSIPT(ph)SPFGDSLESSTELR ddPTM_A459_MK2206_30min_R2 2 DHAPSIPTSPFGDSLESSTELR 22 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPSIPT(0.553)S(0.447)PFGDSLESSTELR;DHAPSIPT(0.553)S(0.447)PFGDSLESSTELR 106.1 8.55E-05 35302000 101020 81317 64057 90748 71053 72567 85581 76875 55602 84507 TRUE FALSE 108754.1689 77278.91603 66192.62841 83333.59811 68263.10221 75328.58804 74344.1119 86922.82645 60438.16145 81749.54351 1.330333653 0.94531312 0.809700282 1.019376923 0.83502732 0.921455764 0.909413175 1.063282102 0.739308856 1 16.31892305 -4.764813528 5.065170909 0.913425442 1.354946118 0.637273048 0.09408524 0.09777589 6.771172771 0.02163478 0.153120422 1.72E-05 4.764813528 0.441520677 DHAPSIPT(ph)SPFGDSLESSTELRR ddPTM_A459_MK2206_30min_R1 2 DHAPSIPTSPFGDSLESSTELRR 23 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPSIPT(0.5)S(0.5)PFGDSLESSTELRR;DHAPSIPT(0.538)S(0.459)PFGDS(0.002)LESSTELRR 89.507 0.00010474 36989800 5737.8 5169.2 5394 4535.4 6380 5289.8 5276 4567.2 3954.7 3573.4 TRUE FALSE 5249.76998 4832.68414 5027.870309 4884.717294 6125.87109 5589.303905 4924.047667 4527.269452 4365.805217 4016.09977 1.307181166 1.20332771 1.251928636 1.216283851 1.525328413 1.391724366 1.226077027 1.127280125 1.087075886 1 11.97157939 -7.793702564 2.095706166 1.051100925 1.312208227 0.599026891 0.090547532 0.263297844 2.259660308 0.072203301 0.029203937 1.61E-08 7.793702564 0.261107302 DHAPSIPT(ph)SPFGDSLESSTELRR ddPTM_A459_MK2206_30min_R2 1 DHAPSIPTSPFGDSLESSTELRR 23 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPSIPT(0.5)S(0.5)PFGDSLESSTELRR 128.09 1.11E-05 18348000 23116 35368 19930 35993 29630 27818 37809 21371 27435 27815 TRUE FALSE 24885.77873 33611.67655 20594.45625 33052.25676 28466.57732 28876.63348 32844.63288 24164.26308 29821.24671 26907.39883 0.924867502 1.249161123 0.765382651 1.228370567 1.057946088 1.07318562 1.22065433 0.898052734 1.108291697 1 14.71571531 -3.540427948 13.81761246 1.057511335 0.724905553 0 0.150675421 0 0 0.031651133 0 0.000288119 3.540427948 -0.332605781 DHAPSIPTS(ph)PFGDSLESSTELR ddPTM_A459_MK2206_30min_R1 1 DHAPSIPTSPFGDSLESSTELR 22 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPSIPT(0.266)S(0.734)PFGDSLESSTELR 109.18 3.47E-05 23362000 4332.2 3668.3 4266.3 2801.3 3687.3 4379.3 4862.8 2969.9 3985.8 4721.8 TRUE FALSE 3963.723641 3429.493003 3976.715443 3017.056611 3540.427033 4627.252181 4538.411485 2943.934477 4400.138173 5306.772232 0.746917988 0.646248389 0.749366144 0.568529509 0.667152627 0.871952287 0.855211282 0.554750487 0.829155272 1 12.37361891 -6.738994619 24.8991125 0.796448106 0.672154837 0.274431534 0.115351794 360.1719433 399556.0622 0.037957463 0.037929419 1.82E-07 6.738994619 -0.124293269 DHAPSIPTS(ph)PFGDSLESSTELRR ddPTM_A459_MK2206_30min_R1 1 DHAPSIPTSPFGDSLESSTELRR 23 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPSIPT(0.18)S(0.82)PFGDSLESSTELRR 127.37 4.74E-06 46580000 3122 2601.8 2547.5 2170 2924.6 2421.8 2298.3 2624 1919.2 1649.9 TRUE FALSE 2856.457506 2432.422347 2374.582798 2337.133776 2808.106989 2558.920223 2144.9846 2601.058645 2118.707708 1854.302068 1.540448859 1.311772439 1.280580353 1.260384603 1.51437408 1.379991031 1.156761154 1.402715711 1.142590382 1 10.85666056 -8.637109894 0.719378054 0.994455783 1.368485406 0.524101249 0.110826407 0.73083066 0.829370217 0.111422686 0.04234004 2.31E-09 8.637109894 0.374029623 DHAPSIPTS(ph)PFGDSLESSTELRR ddPTM_A459_MK2206_30min_R2 3 DHAPSIPTSPFGDSLESSTELRR 23 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPSIPT(0.054)S(0.946)PFGDSLESSTELRR;DHAPS(0.004)IPT(0.196)S(0.797)PFGDS(0.002)LESSTELRR;DHAPSIPT(0.196)S(0.804)PFGDSLESSTELRR 114.57 5.63E-06 40553000 46724 72035 57381 77391 70548 65481 63024 51376 59819 59541 TRUE FALSE 50301.22536 68457.84665 59294.0539 71067.90774 67777.93104 67972.92534 54748.87309 58091.0196 65021.94849 57598.18205 0.873312726 1.188541794 1.029443149 1.233856785 1.176737332 1.180122756 0.950531269 1.008556478 1.128888902 1 15.81373566 -7.256607741 24.93630182 1.022707203 1.121573757 0.151466717 0.105301746 734.3752772 3790160.118 0.040778935 0.030567317 5.54E-08 7.256607741 0.098866555 DHAPSIPTSPFGDS(ph)LESSTELRR ddPTM_A459_MK2206_30min_R1 1 DHAPSIPTSPFGDSLESSTELRR 23 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPSIPT(0.05)S(0.05)PFGDS(0.513)LES(0.129)S(0.129)T(0.129)ELRR 46.786 0.035073 6039400 895.38 1084.5 896.5 1075.7 879.41 796.2 941.17 911.61 655.15 721.87 TRUE FALSE 819.2232292 1013.898853 835.6480778 1158.5506 844.3812375 841.2801559 878.3862666 903.6398899 723.255187 811.3007054 1.009765212 1.249720167 1.030010294 1.428016262 1.040774687 1.036952329 1.082688898 1.113816226 0.891476098 1 9.664092933 -6.463975236 24.99999684 1.036055863 1.181316116 0.270029292 0.121773844 360.0545325 152815.0499 0.036002305 0.040822693 3.44E-07 6.463975236 0.145260253 DHEDYDPQTVR ddPTM_A459_MK2206_30min_R1 1 DHEDYDPQTVR 11 0 Q93008;Q93008-3 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X 0 111.52 0.010801 0 2026.6 1817 1829.5 1742.8 1835.6 1430.7 1714.9 1660.5 1462.5 1593.8 FALSE TRUE 1854.227028 1698.71297 1705.318637 1877.030758 1762.484165 1511.704998 1600.50215 1645.982424 1614.532109 1791.251977 1.035157003 0.948338364 0.952026102 1.047887613 0.98393983 0.843937658 0.893510333 0.918900548 0.90134282 1 10.80675258 -6.639490472 8.675638587 0.905497104 0.992561741 0.436093249 0.046415441 0.23742264 17.02211154 0.015070524 0.015058767 2.29E-07 6.639490472 0.087064637 DHFEEAMR ddPTM_A459_MK2206_30min_R1 4 DHFEEAMR 8 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ;;; 184.49 0.0002243 121595700 27006.8 27526.7 27452.9 24686.7 27590.6 24355.6 27472.8 24798.4 23959.6 20756.3 FALSE TRUE 24709.72984 25734.70683 25589.47364 26588.07391 26491.60798 25734.59302 25640.13964 24581.5902 26450.28616 23327.74715 1.059242013 1.103180117 1.096954347 1.13976175 1.135626506 1.103175239 1.099126267 1.053748999 1.133855147 1 14.50975937 -11.09956076 10.89626188 0.999997488 1.103105423 0.550360138 0.027857832 1.75E-06 6.79E-08 0.027704838 0.006719246 7.95E-12 11.09956076 0.103107935 DHFEEAMR ddPTM_A459_MK2206_30min_R2 3 DHFEEAMR 8 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ;; 171.53 0.0002243 83759600 223832 296983 263262 296208 282309 287369 288016 248426 242076 281076 FALSE TRUE 240968.75 282235.2561 272039.0237 272006.8589 271224.1302 298305.0287 250199.1532 280896.1312 263131.3329 271904.5131 0.886225636 1.037994011 1.000494698 1.000376403 0.997497714 1.097094804 0.920172859 1.033069028 0.967734334 1 18.05274057 -4.752172642 24.99735163 1.006625221 0.8862254 0.40399885 0.043655898 361.7380717 975731.2241 0.01021488 0.125900955 1.77E-05 4.752172642 -0.12039982 DHFGLEGDEESTMLEDS(ph)VSPK ddPTM_A459_MK2206_30min_R1 2 DHFGLEGDEESTMLEDSVSPK 21 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 DHFGLEGDEESTMLEDS(0.975)VS(0.025)PK;DHFGLEGDEESTMLEDS(0.917)VS(0.083)PK 164.42 1.19E-08 48323000 8726.5 9419.9 9625.5 7839.8 5372.4 5309.1 6323.6 6618.4 9711.1 8909 TRUE FALSE 7984.26535 8806.662798 8972.147878 8443.622754 5158.405932 5609.696654 5901.764182 6560.536027 10720.6036 10012.71418 0.79741269 0.879548007 0.896075501 0.843290101 0.515185577 0.560257344 0.58942701 0.655220543 1.070699054 1 13.28954548 -11.04926183 15.44811314 1.000000012 0.745892693 0.158500571 0.166867481 7.64E-08 2.28E-09 0.174948052 0.042431133 8.93E-12 11.04926183 -0.254107319 DHFGLEGDEESTMLEDS(ph)VSPK ddPTM_A459_MK2206_30min_R2 1 DHFGLEGDEESTMLEDSVSPK 21 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 DHFGLEGDEESTMLEDS(0.817)VS(0.183)PK 128.94 0.00010784 10578000 57796 54817 45749 51286 48938 31381 54788 43235 30239 57916 TRUE FALSE 62220.9062 52094.86749 47274.24883 47095.76974 47016.44823 32575.22594 47594.26979 48885.96295 32869.13356 56026.20566 1.110567911 0.929830369 0.843788157 0.840602521 0.839186728 0.581428379 0.849500144 0.872555305 0.586674275 1 15.77381417 -4.102513736 0.810958713 0.779144039 1.831396678 0.397649012 0.119929416 6.357578422 1.462701097 0.041920489 7.801519069 7.90E-05 4.102513736 1.052252638 DHFGLEGDEESTMLEDSVS(ph)PK ddPTM_A459_MK2206_30min_R1 2 DHFGLEGDEESTMLEDSVSPK 21 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 DHFGLEGDEESTMLEDS(0.371)VS(0.629)PK;DHFGLEGDEESTMLEDS(0.072)VS(0.928)PK 216.55 1.75E-20 35417000 6960.8 8376.5 7721.5 6609.4 4915.9 4276.8 5778.2 5612.7 7445.9 7422.3 TRUE FALSE 6368.747407 7831.188328 7197.386093 7118.457133 4720.089293 4518.94872 5392.746821 5563.628756 8219.92795 8341.83056 0.763471202 0.938785351 0.862806556 0.853344728 0.565833753 0.541721471 0.646470434 0.666955378 0.985386588 1 13.02614829 -6.118777362 10.27835322 0.703767269 0.862494915 0.110451344 0.152517189 0.705422065 57.20787226 0.045213447 0.058415885 7.61E-07 6.118777362 0.158727646 DHFGLEGDEESTMLEDSVS(ph)PK ddPTM_A459_MK2206_30min_R2 3 DHFGLEGDEESTMLEDSVSPK 21 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 DHFGLEGDEEST(0.008)MLEDS(0.315)VS(0.677)PK;DHFGLEGDEESTMLEDS(0.354)VS(0.646)PK;DHFGLEGDEESTMLEDS(0.319)VS(0.681)PK 165.34 7.84E-10 9589600 113219 96426 86052 95361 93562 67320 109240 84542 63819 130159 TRUE FALSE 121887.1337 91637.62506 88920.93073 87569.70126 89888.28577 69881.90977 94896.65678 95591.92968 69369.86126 125911.9225 0.968034887 0.727791485 0.706215337 0.695483792 0.713898128 0.555006296 0.753674909 0.759196808 0.550939577 1 16.94205537 -10.31877932 19.18268682 0.999999842 0.711823247 0.377922491 0.109851285 0 0 0.104844646 0.025428562 4.80E-11 10.31877932 -0.288176594 DHFLGPQESFPEENAS(ph)SPFTQAR ddPTM_A459_MK2206_30min_R2 1 DHFLGPQESFPEENASSPFTQAR 23 0 A0A0U1RRL2;B1AM27;O14795;O14795-2;A0A1B0GUS7 A0A0U1RRL2 UNC13B Protein unc-13 homolog B 1 DHFLGPQES(0.001)FPEENAS(0.517)S(0.38)PFT(0.102)QAR 67.218 0.0024279 2769600 8149.8 10401 6973.3 10984 9339.6 10802 9585.5 10736 7810.4 12340 TRUE FALSE 8773.754954 9884.501464 7205.786342 10086.57206 8972.880376 11213.07768 8326.912336 12139.23206 8489.734474 11937.34681 0.734983669 0.828031691 0.603633827 0.844959288 0.751664546 0.939327462 0.697551346 1.016912071 0.711191072 1 13.5431946 -14.52287875 0.071953218 1.715284678 0.550078671 0.269005734 0.111846236 373.7269044 1.922845953 43.6194366 5.107650507 3.00E-15 14.52287875 -1.165206007 DHFLGPQESFPEENASS(ph)PFTQAR ddPTM_A459_MK2206_30min_R1 1 DHFLGPQESFPEENASSPFTQAR 23 0 A0A0U1RRL2;B1AM27;O14795;O14795-2;A0A1B0GUS7 A0A0U1RRL2 UNC13B Protein unc-13 homolog B 1 DHFLGPQESFPEENAS(0.029)S(0.952)PFT(0.019)QAR 120.52 7.01E-06 4871700 671.27 803.13 752.61 630.29 816.76 610.23 893.75 866.04 690.81 590.56 TRUE FALSE 614.1749615 750.846091 701.5249301 678.835045 784.2267197 644.7806952 834.1295682 858.4683036 762.6221716 663.7230313 0.925348274 1.13126418 1.056954327 1.022768554 1.18155719 0.971460481 1.256743444 1.293413462 1.149006642 1 9.374437527 -7.268471022 24.99713353 1.19924201 1.057300148 0.259866192 0.100637193 672.7812668 2391693.442 0.039495335 0.027245233 5.39E-08 7.268471022 -0.141941861 DHGDWDEASR ddPTM_A459_MK2206_30min_R2 1 DHGDWDEASR 10 0 A0A3B3IRL2;O75629 A0A3B3IRL2 CREG1 Protein CREG1 0 88.134 0.04591 2060900 10807 13922 8666.9 14370 11305 13238 14977 12711 10733 12232 FALSE TRUE 11634.39223 13230.65372 8955.85012 13195.92503 10861.1089 13741.78137 13010.50191 14372.37134 11666.53694 11832.87084 0.983226504 1.118127114 0.756861986 1.11519218 0.917876063 1.161322687 1.099522008 1.214614064 0.985943064 1 13.53051252 -6.763748413 24.99995551 1.106146348 0.981335156 0.193085508 0.114724908 93.14744551 1008499.798 0.037542451 0.034685571 1.72E-07 6.763748413 -0.124811192 DHGRPHWS(ph)PPEENLPR ddPTM_A459_MK2206_30min_R2 1 DHGRPHWSPPEENLPR 16 1 G3V4E0 G3V4E0 SNW1 1 DHGRPHWS(1)PPEENLPR 59.252 0.042513 3662400 3721.1 2107.9 1971.6 3803.9 3954 3591.7 3870.7 3963 3551.1 4270.8 TRUE FALSE 4005.990277 2003.224751 2037.33216 3493.109202 3798.746093 3728.38466 3362.47244 4480.977707 3859.968259 4131.444146 0.969634379 0.484872766 0.493128332 0.845493508 0.919471729 0.902441018 0.813873387 1.08460324 0.934290317 1 12.01243045 -5.937028312 5.632596396 0.933877079 0.634041087 0.462828395 0.140648198 0.171802361 10.61690141 0.040095065 0.059907052 1.16E-06 5.937028312 -0.299835992 DHHTADLCR ddPTM_A459_MK2206_30min_R1 1 DHHTADLCR 9 0 P21980-2;P21980;A2A299;P21980-3;A2A2A0 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 0 105.1 0.019588 8122100 4353.6 2718.8 3345.1 2595.3 3585.8 2818 4838.9 3953 315.21 2449.1 FALSE TRUE 3983.303458 2541.805626 3118.043932 2795.190456 3442.969993 2977.552725 4516.10581 3918.439338 347.9772075 2752.512998 1.447151553 0.923449091 1.132798986 1.015504907 1.250846044 1.081757916 1.640720975 1.423586134 0.12642164 1 11.42653366 -8.248259734 24.93708795 0.563210766 1.2264175 0.47496181 0.284143932 559.6221444 1058861.319 0.190926083 0.071208828 5.65E-09 8.248259734 0.663206735 DHHTADLCR ddPTM_A459_MK2206_30min_R2 1 DHHTADLCR 9 0 P21980-2;P21980;A2A299;P21980-3;A2A2A0 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 0 96.034 0.030692 4762300 2236 5709.3 2785.6 10467 7416.8 7754.9 6893.6 3530.7 2756.2 5381.3 FALSE TRUE 2407.189879 5425.784464 2878.470514 9611.812618 7125.579166 8050.018154 5988.462039 3992.174613 2995.929294 5205.708622 0.462413488 1.042275866 0.552944992 1.846398505 1.368801 1.546382777 1.150364432 0.766883993 0.575508449 1 12.34587885 -7.762163824 6.733333329 0.750747236 1.164832403 0.138467841 0.403414311 0.263420434 57.90725352 0.219713454 0.114377268 1.73E-08 7.762163824 0.414085167 DHIKDEWEGLR ddPTM_A459_MK2206_30min_R1 1 DHIKDEWEGLR 11 1 H0YH15;O60306 H0YH15 AQR Intron-binding protein aquarius 0 90.827 0.021726 1936200 1213.9 971.73 1226 1163.3 1129.7 1040.9 1390.8 1228.9 1196.7 1009.2 FALSE TRUE 1110.651431 908.4702004 1142.782536 1252.897568 1084.701657 1099.834858 1298.02227 1218.155857 1321.101247 1134.227315 0.979214145 0.80095955 1.007542774 1.104626516 0.956335333 0.969677633 1.144411047 1.073996227 1.164758801 1 10.14749409 -5.615220322 0.577087772 1.088660747 0.854268616 0.339730622 0.082584079 1.893560627 0.912752905 0.053192763 0.265477253 2.43E-06 5.615220322 -0.234392131 DHLPPPS(ph)SASPSR ddPTM_A459_MK2206_30min_R2 1 DHLPPPSSASPSR 13 0 Q2YD98;Q2YD98-2 Q2YD98 UVSSA UV-stimulated scaffold protein A 1 DHLPPPS(0.25)S(0.25)AS(0.25)PS(0.25)R 86.539 0.024261 0 30805 32868 31201 47435 37777 46537 38745 35730 40599 35342 TRUE FALSE 33163.45449 31235.82291 32241.22577 43559.40876 36293.68517 48307.99815 33657.73496 40400.03368 44130.22763 34188.79343 0.970009502 0.91362753 0.943034911 1.274084412 1.061566716 1.412977566 0.984466885 1.181674743 1.290780493 1 15.06123589 -5.745531685 24.55456587 1.177389084 0.939364163 0.40715433 0.127060453 180.4835222 278585.1804 0.032600507 0.056218591 1.80E-06 5.745531685 -0.238024922 DHLPPPSS(ph)ASPSR ddPTM_A459_MK2206_30min_R1 1 DHLPPPSSASPSR 13 0 Q2YD98;Q2YD98-2 Q2YD98 UVSSA UV-stimulated scaffold protein A 1 DHLPPPS(0.213)S(0.535)AS(0.126)PS(0.126)R 99.238 0.0078751 4808900 4015.8 3349.4 3683.3 3285 4535.4 4214 4195.5 3755.3 3418.1 3276.7 TRUE FALSE 3674.235122 3131.353451 3433.287858 3538.011269 4354.745414 4452.593038 3915.62585 3722.467808 3773.423727 3682.642334 0.997717071 0.850300726 0.93228925 0.96072628 1.182505663 1.209075613 1.063265312 1.010814375 1.024651157 1 11.84652557 -6.0839779 6.062918631 1.087428666 0.923169018 0.495940473 0.072729032 0.199370344 11.5368945 0.023408584 0.030595994 8.24E-07 6.0839779 -0.164259648 DHQYQFLEDAVR ddPTM_A459_MK2206_30min_R1 2 DHQYQFLEDAVR 12 0 Q13263-2;Q13263;M0R3C0;M0R2I3 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 0 ; 131.13 0.002907 14641200 4467.4 4013.4 4558.9 3917.6 3899.1 3692.9 4866.8 3990.4 4248.3 4934.2 FALSE TRUE 4087.424171 3752.126931 4249.45457 4219.334231 3743.790591 3901.988807 4542.144652 3955.512354 4689.925988 5545.485947 0.737072316 0.676609222 0.766290747 0.760859241 0.675105956 0.703633341 0.819070627 0.713285074 0.845719569 1 12.43709817 -8.776639203 0.934746452 1.001603751 0.724628354 0.79228989 0.042648818 0.40927252 0.691620495 0.04087306 0.013590541 1.67E-09 8.776639203 -0.276975397 DHQYQFLEDAVR ddPTM_A459_MK2206_30min_R2 2 DHQYQFLEDAVR 12 0 Q13263-2;Q13263;M0R3C0;M0R2I3 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 0 ; 134.18 0.0022987 9673100 44360 52158 44338 54359 38270 43869 60096 39521 37867 56864 FALSE TRUE 47756.23571 49567.90956 45816.20679 49917.69581 36767.32751 45538.46554 52205.32301 44686.5304 41160.60321 55008.53234 0.868160514 0.901094929 0.832892732 0.907453693 0.668393174 0.827843674 0.949040463 0.812356347 0.748258524 1 15.74736779 -4.520293306 0.00659477 1.662764757 3.35E-06 0.046537843 0.089525114 97102.03956 92.66055262 11086.21811 12299.88729 3.02E-05 4.520293306 -1.662761407 DHRPPCAQEAPR ddPTM_A459_MK2206_30min_R1 1 DHRPPCAQEAPR 12 1 Q13501;Q13501-2;E7EMC7;E9PFW8;C9JRJ8;E3W990 Q13501 SQSTM1 Sequestosome-1 0 105.13 0.0075267 4538400 1191.4 1135.6 1299.8 977.32 1047.9 1292.6 1506.2 1073.7 805.83 821.87 FALSE TRUE 1090.065174 1061.672234 1211.573197 1052.593356 1006.159924 1365.785895 1405.724146 1064.312754 889.5989122 923.6894604 1.180120831 1.14938221 1.311667232 1.139553282 1.089283755 1.4786202 1.521857947 1.152240877 0.963093064 1 9.851264096 -8.004221238 24.99702909 1.006919946 1.266216495 0.411751079 0.135245634 189.186675 1120305.629 0.084749393 0.03915434 9.90E-09 8.004221238 0.25929655 DHRPPCAQEAPR ddPTM_A459_MK2206_30min_R2 1 DHRPPCAQEAPR 12 1 Q13501;Q13501-2;E7EMC7;E9PFW8;C9JRJ8;E3W990 Q13501 SQSTM1 Sequestosome-1 0 94.538 0.015024 2883500 833.31 1137.4 1133.6 1128.1 2789.3 1089.7 2229.6 660.66 871.24 1227.2 FALSE TRUE 897.1088543 1080.91837 1171.393658 1035.930621 2679.778067 1131.169297 1936.850842 747.0105304 947.0188804 1187.156565 0.755678637 0.910510376 0.986722134 0.872614997 2.257308048 0.952839188 1.631504133 0.629243482 0.797720291 1 10.2132945 DHS(ph)PTPSVFNR ddPTM_A459_MK2206_30min_R2 1 DHSPTPSVFNR 11 0 H0Y8P7 H0Y8P7 FIP1L1 1 DHS(0.999)PT(0.001)PSVFNR 81.278 0.027908 5381100 15309 26705 20333 23761 28745 26172 27490 18560 20902 25830 TRUE FALSE 16481.06881 25378.86853 21010.89207 21819.65029 27616.32687 27167.9938 23880.52998 20985.85573 22720.01818 24987.16922 0.65958127 1.015676018 0.840867242 0.873234183 1.105220308 1.087277777 0.9557117 0.839865274 0.909267392 1 14.60889985 -4.754305721 24.988908 0.955735509 0.659580753 0.498741259 0.089881975 237.2089865 830861.4411 0.024535394 0.242105902 1.76E-05 4.754305721 -0.296154756 DHS(ph)PTPSVFNS(ph)DEER ddPTM_A459_MK2206_30min_R2 2 DHSPTPSVFNSDEER 15 0 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 DHS(0.973)PT(0.182)PS(0.134)VFNS(0.711)DEER;DHS(0.93)PT(0.348)PS(0.005)VFNS(0.717)DEER 99.881 0.0096879 0 28956 36831 28550 39151 31176 35436 39961 30735 24133 40631 TRUE FALSE 31172.89362 35002.0261 29501.84275 35952.23806 29951.87359 36784.54181 34714.0727 34752.17003 26232.04472 39305.2138 0.793098182 0.890518654 0.750583444 0.914693869 0.762033092 0.935869272 0.883192568 0.884161837 0.667393513 1 15.26243308 -6.75858099 24.99976586 0.867450365 0.82714322 0.069441312 0.092596843 288.1164222 2519893.332 0.030076973 0.028803602 1.74E-07 6.75858099 -0.040307145 DHS(ph)PTPSVFNSDEER ddPTM_A459_MK2206_30min_R1 4 DHSPTPSVFNSDEER 15 0 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 DHS(0.999)PT(0.001)PSVFNSDEER;DHS(0.999)PTPSVFNSDEER;DHS(1)PTPSVFNSDEER;DHS(0.997)PT(0.003)PSVFNSDEER 246.34 7.95E-28 217564000 8980.1 9132.2 9259.3 7156.7 7468.4 7471.1 7781.2 7007.3 7977.6 7755.2 TRUE FALSE 8216.295339 8537.69212 8630.804514 7707.910274 7170.917813 7894.107226 7262.130346 6946.035915 8806.900068 8715.972725 0.94267107 0.97954553 0.99022849 0.884343093 0.822732934 0.90570582 0.83319792 0.796931809 1.010432266 1 13.08944597 -5.77087313 23.51311419 0.87994163 0.971688072 0.19885783 0.067617231 117.0173957 291661.0208 0.018268352 0.027555595 1.69E-06 5.77087313 0.091746442 DHS(ph)PTPSVFNSDEER ddPTM_A459_MK2206_30min_R2 4 DHSPTPSVFNSDEER 15 0 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 DHS(0.757)PT(0.241)PS(0.002)VFNSDEER;DHS(0.994)PT(0.006)PSVFNSDEER;DHS(1)PTPSVFNSDEER;DHS(0.999)PT(0.001)PSVFNSDEER 172.58 2.52E-05 279325000 356529 598787 409302 653351 473087 495555 525683 472465 401126 544069 TRUE FALSE 383825.1344 569052.1083 422947.9244 599970.1333 454511.2273 514413.6928 456660.1906 534217.7977 436015.2144 526316.0731 0.729267362 1.081198423 0.803600623 1.139942639 0.863570867 0.97738549 0.867653895 1.015013269 0.828428461 1 19.00556993 -4.73750061 24.86417929 0.949923358 0.729266336 0.287833143 0.105468191 2507.8968 2604701.759 0.023598143 1.457795697 1.83E-05 4.73750061 -0.220657022 DHS(ph)PTPSVFNSDEERYR ddPTM_A459_MK2206_30min_R1 1 DHSPTPSVFNSDEERYR 17 1 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 DHS(0.928)PT(0.069)PS(0.002)VFNSDEERY(0.001)R 65.085 0.024335 5188300 864.57 764.92 648.47 834.1 832.15 725 762.39 739.96 412.72 487.4 TRUE FALSE 791.0337815 715.123569 604.4536631 898.3425265 799.0037034 766.0488735 711.5323542 733.4906077 455.6237209 547.7827917 1.444064679 1.305487467 1.103455005 1.639961204 1.458614099 1.398453703 1.298931556 1.339017251 0.831759829 1 9.097460135 -8.230858241 7.964848989 0.915910561 1.372819553 0.647692792 0.135007674 0.144978347 34.72023976 0.097975727 0.035593758 5.88E-09 8.230858241 0.456908993 DHS(ph)PTPSVFNSDEERYR ddPTM_A459_MK2206_30min_R2 1 DHSPTPSVFNSDEERYR 17 1 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 DHS(0.838)PT(0.154)PS(0.008)VFNSDEERYR 55.755 0.033108 5393600 1777 8872 6108.3 8149.5 8106.7 8789.6 7099.5 3749.6 7285.3 4733 TRUE FALSE 1913.048486 8431.429381 6311.947673 7483.659781 7788.390225 9124.094387 6167.327122 4239.685594 7918.962225 4578.562598 0.417827308 1.841501389 1.378587174 1.634499829 1.701055748 1.992785769 1.347000721 0.925986159 1.729573869 1 12.16067903 -9.667701596 0.640061336 0.972488788 1.478304271 0.070306742 0.447404544 16.36848448 6.773508001 1.705753165 0.171817477 2.15E-10 9.667701596 0.505815482 DHSPT(ph)PSVFNSDEERYR ddPTM_A459_MK2206_30min_R1 2 DHSPTPSVFNSDEERYR 17 1 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 DHS(0.182)PT(0.8)PS(0.018)VFNSDEERYR;DHS(0.025)PT(0.943)PS(0.032)VFNSDEERYR 105.17 0.0037136 16770600 1715 1453.06 1594.14 1876.49 2458.7 1508.13 1202.93 1666.36 858.71 539.73 TRUE FALSE 1569.130244 1358.46553 1485.934218 2021.017585 2360.764773 1593.519017 1122.684735 1651.79119 947.9759774 606.5958272 2.586780479 2.239490397 2.449628157 3.331736709 3.891824947 2.626986448 1.850795347 2.723050697 1.562780248 1 9.244591763 -8.340414772 0.936339871 0.996435997 2.826792587 0.553409367 0.529090789 0.462271273 0.874527966 0.557720573 0.196071442 4.57E-09 8.340414772 1.830356589 DHTVS(ph)GDEDYCPR ddPTM_A459_MK2206_30min_R1 2 DHTVSGDEDYCPR 13 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 DHT(0.042)VS(0.958)GDEDYCPR;DHT(0.026)VS(0.974)GDEDYCPR 203.88 4.89E-05 28412000 2293.4 2520.8 2688.2 2149.3 2510.1 2474.9 2282.3 2372.5 2076.26 1725.62 TRUE FALSE 2098.334287 2356.695462 2505.732474 2314.839458 2410.117402 2615.026699 2130.051931 2351.757483 2292.094657 1939.402833 1.081948655 1.215165525 1.292012382 1.193583622 1.242711086 1.348366958 1.09830299 1.212619391 1.181855888 1 10.92139678 -9.270936787 0.754101406 0.99600359 1.22051872 0.414890173 0.074775389 2.896903012 2.148453325 0.103735346 0.026384257 5.36E-10 9.270936787 0.22451513 DHTVS(ph)GDEDYCPR ddPTM_A459_MK2206_30min_R2 2 DHTVSGDEDYCPR 13 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 DHT(0.001)VS(0.999)GDEDYCPR;DHT(0.027)VS(0.973)GDEDYCPR 177.36 0.00010376 36156000 22032 26149 24162.2 26066 29602 31445 43970 28197.8 26500 26965 TRUE FALSE 23718.78686 24850.47868 24967.75569 23936.32442 28439.67674 32641.66151 38196.68618 31883.34928 28804.9221 26085.13426 0.90928368 0.95266823 0.957164163 0.917623202 1.090263767 1.251351102 1.464308591 1.222280436 1.104265817 1 14.67094024 -6.512067393 3.048281374 1.237284864 0.938058862 0.557516216 0.113420159 0.184082691 3.495684984 0.039599423 0.042473495 3.08E-07 6.512067393 -0.299226002 DHYEATAMHR ddPTM_A459_MK2206_30min_R1 4 DHYEATAMHR 10 0 B1AJY6;B1AJY5;B1AJY7;O75832-2;O75832 B1AJY6 PSMD10 26S proteasome non-ATPase regulatory subunit 10 0 ;;; 151.22 0.00053998 29705200 12583.61 13079.9 13377.28 10518.52 13014.7 12164.4 13007.48 12810.45 10383.45 9892.06 FALSE TRUE 11513.30789 12228.39613 12469.2675 11328.65823 12496.29694 12853.13782 12139.77474 12698.44959 11462.84679 11117.56307 1.035596363 1.099916956 1.121582798 1.018987539 1.124014036 1.156111077 1.091945659 1.142197215 1.0310575 1 13.44055297 -8.455026761 5.342956899 1.000351141 1.099225898 0.407670882 0.040950403 0.185499186 9.482419864 0.039746837 0.010327285 3.51E-09 8.455026761 0.098874757 DHYEATAMHR ddPTM_A459_MK2206_30min_R2 6 DHYEATAMHR 10 0 B1AJY6;B1AJY5;B1AJY7;O75832-2;O75832 B1AJY6 PSMD10 26S proteasome non-ATPase regulatory subunit 10 0 ;;;;; 142.98 0.0006429 25668450 57330.9 78379.7 60130.5 86256.2 74530.9 82533.9 81558.4 64384.4 65239.8 76299.6 FALSE TRUE 61720.19778 74487.47807 62135.22086 79208.79254 71604.44238 85674.7854 70849.68411 72799.66214 70914.23988 73809.9503 0.836204299 1.009179355 0.84182716 1.073145182 0.970119098 1.16074845 0.959893399 0.986312304 0.960768021 1 16.1715277 -5.764349819 24.99999958 1.017084691 0.907081181 0.35907515 0.073058021 86.60203994 743900.3641 0.019809749 0.030883033 1.72E-06 5.764349819 -0.11000351 DHYQDPVPGIT(ph)PSSSSR ddPTM_A459_MK2206_30min_R1 3 DHYQDPVPGITPSSSSR 17 0 Q7KZ85;Q7KZ85-2 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 DHYQDPVPGIT(0.732)PS(0.167)S(0.014)S(0.044)S(0.044)R;DHYQDPVPGIT(0.929)PS(0.058)S(0.011)S(0.001)SR;DHYQDPVPGIT(0.742)PS(0.036)S(0.003)S(0.01)S(0.208)R 125.77 0.0016548 24981700 6576.6 6113.2 6165 5229.4 7175.4 6454.4 7559.3 7739.1 6367 6654.5 TRUE FALSE 6017.225635 5715.229569 5746.536977 5632.169294 6889.588624 6819.84255 7055.03289 7671.437865 7028.872435 7478.909699 0.804559204 0.764179513 0.768365605 0.753073579 0.921202274 0.911876574 0.943323716 1.025742812 0.939825819 1 12.86861225 -6.493655536 1.603300834 0.973282887 0.768338209 0.874316337 0.034283763 0.123308893 0.642514169 0.013422171 0.015089573 3.21E-07 6.493655536 -0.204944678 DHYQDPVPGIT(ph)PSSSSR ddPTM_A459_MK2206_30min_R2 2 DHYQDPVPGITPSSSSR 17 0 Q7KZ85;Q7KZ85-2 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 DHYQDPVPGIT(0.959)PS(0.037)S(0.003)S(0.001)SR;DHYQDPVPGIT(0.953)PS(0.032)S(0.011)S(0.004)S(0.001)R 160.76 5.71E-05 11299300 38798 46241 38701 43376 45605 43501 49084 41583 34141 50156 TRUE FALSE 41768.40471 43944.73918 39991.27202 39832.04205 43814.31855 45156.46104 42639.21184 47018.04088 37110.52247 48519.41383 0.860859632 0.905714552 0.824232382 0.820950603 0.903026543 0.930688512 0.878807234 0.969056243 0.76485925 1 15.5662745 -6.359087986 8.456264181 0.906106862 0.85472382 0.156254887 0.062282676 0.659652382 51.92212295 0.01845117 0.02092081 4.37E-07 6.359087986 -0.051383042 DHYQDPVPGITPSSSS(ph)R ddPTM_A459_MK2206_30min_R2 1 DHYQDPVPGITPSSSSR 17 0 Q7KZ85;Q7KZ85-2 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 DHYQDPVPGIT(0.239)PS(0.035)S(0.051)S(0.161)S(0.514)R 85.881 0.0075953 9640300 29879 36473 30344 38161 31713 41867 41920 26786 43328 39852 TRUE FALSE 32166.55921 34661.80386 31355.65382 35043.12423 30467.78827 43460.27802 36415.85365 30287.02217 47096.59112 38551.6325 0.834376059 0.899100806 0.813341791 0.908991966 0.790311234 1.127326528 0.944599522 0.785622299 1.221649722 1 15.23450433 -6.744213035 24.97794405 0.997988542 0.853322229 0.349899627 0.112173588 313.6310355 454759.4772 0.03605634 0.035971791 1.80E-07 6.744213035 -0.144666312 DIAWTEDSKR ddPTM_A459_MK2206_30min_R2 2 DIAWTEDSKR 10 1 D6RD66;O75083 D6RD66 WDR1 WD repeat-containing protein 1 0 ; 123.11 0.0057569 17816200 27272 28107 22817 32177 25753 20621.7 27846 26195 23503 29047 FALSE TRUE 29359.96529 26711.24725 23577.70739 29548.03617 24741.80782 21406.47324 24189.78675 29618.77644 25547.24846 28099.19877 1.044868415 0.950605299 0.839088245 1.05156152 0.880516488 0.761817923 0.86087105 1.054079039 0.909180673 1 14.77824137 -7.752606469 24.99929227 0.986222401 0.909676017 0.126705318 0.089939053 408.9860212 1157538.615 0.045184284 0.025591838 1.77E-08 7.752606469 -0.076546384 DIDDDLEGEVTEECGK ddPTM_A459_MK2206_30min_R1 1 DIDDDLEGEVTEECGK 16 0 A0A0J9YYL3;A0A0J9YXJ8;A0A0J9YVP6;A0A0J9YXX5;Q9UHX1-4;Q9UHX1-6;Q9UHX1-3;Q9UHX1-5;Q9UHX1-2;Q9UHX1 A0A0J9YYL3 PUF60 Poly(U)-binding-splicing factor PUF60 0 286.09 3.69E-149 0 469.16 811.45 759.77 622.24 516.32 465.15 736.66 843.33 732.55 753.78 FALSE TRUE 429.2554783 758.6244575 708.1989292 670.1650326 495.7538811 491.486391 687.5187555 835.9568547 808.701194 847.1639571 0.50669705 0.895487174 0.835964424 0.791068868 0.585192367 0.580154983 0.81155336 0.986771035 0.954598206 1 9.726497401 -7.620248621 3.892431218 0.977536499 0.71191452 0.540941124 0.115307779 0.198549721 5.673869488 0.062642546 0.034171263 2.40E-08 7.620248621 -0.265621979 DIDDDLEGEVTEECGK ddPTM_A459_MK2206_30min_R2 2 DIDDDLEGEVTEECGK 16 0 A0A0J9YYL3;A0A0J9YXJ8;A0A0J9YVP6;A0A0J9YXX5;Q9UHX1-4;Q9UHX1-6;Q9UHX1-3;Q9UHX1-5;Q9UHX1-2;Q9UHX1 A0A0J9YYL3 PUF60 Poly(U)-binding-splicing factor PUF60 0 ; 186.13 1.11E-05 4891800 40258 44778 47673 45442 48079 32269 53387 40089 42592 45934 FALSE TRUE 43340.18343 42554.38963 49262.39403 41729.24324 46191.17688 33497.01941 46377.22277 45328.76995 46296.57517 44435.17734 0.975357499 0.957673451 1.108635027 0.939103785 1.03951823 0.75384012 1.043705135 1.020110027 1.041890186 1 15.43941463 DIDEVSSLLR ddPTM_A459_MK2206_30min_R1 2 DIDEVSSLLR 10 0 P50990-2;P50990;H7C4C8;P50990-3 P50990-2 CCT8 T-complex protein 1 subunit theta 0 ; 176.38 0.00093771 7938100 3897.5 3610.2 4144.7 3848.1 3539.9 3439.1 3552.7 3325 3465.8 3291 FALSE TRUE 3565.997158 3375.175324 3863.369312 4144.481329 3398.898287 3633.81887 3315.705865 3295.929876 3826.082312 3698.713926 0.964118131 0.91252673 1.044516929 1.120519568 0.918940571 0.982454697 0.896448315 0.891101594 1.034435858 1 11.85280801 DIDEVSSLLR ddPTM_A459_MK2206_30min_R2 3 DIDEVSSLLR 10 0 P50990-2;P50990;H7C4C8;P50990-3 P50990-2 CCT8 T-complex protein 1 subunit theta 0 ;; 185.81 0.002648 14815200 44799.4 51420.6 52516.4 54548 54508 49663.5 55884 47799.9 47364.6 49756.5 FALSE TRUE 48229.27651 48867.12778 54267.27056 50091.25391 52367.74204 51553.47929 48546.36367 54047.51105 51484.28729 48132.94948 1.00200127 1.015253133 1.12744536 1.04068532 1.087981156 1.071064206 1.008589006 1.122879683 1.069626687 1 15.55473721 -5.030886528 23.63196319 1.068623751 1.005314187 0.249973962 0.039862614 354.7940327 271462.4165 0.009550483 0.025356697 9.31E-06 5.030886528 -0.063309563 DIDHETVVEEQIIGENS(ph)PPDYSEYMTGK ddPTM_A459_MK2206_30min_R1 4 DIDHETVVEEQIIGENSPPDYSEYMTGK 28 0 P25490;A0A494C032;H0YJU4;H0YJV7 P25490 YY1 Transcriptional repressor protein YY1 1 DIDHETVVEEQIIGENS(0.861)PPDY(0.05)S(0.046)EY(0.036)MT(0.007)GK;DIDHETVVEEQIIGENS(1)PPDYSEYMTGK;DIDHETVVEEQIIGENS(1)PPDYSEYMTGK;DIDHETVVEEQIIGENS(0.999)PPDY(0.001)SEYMTGK 145.61 6.62E-17 32410900 3962.51 3810.69 4296.65 3966.47 4457.38 4601.49 4379.07 3810.97 3202.76 2899.68 TRUE FALSE 3625.477717 3562.613388 4005.005369 4271.968207 4279.833116 4862.022387 4086.95023 3777.651091 3535.698363 3258.91425 1.112480243 1.093190282 1.228938555 1.310856279 1.313269631 1.491914796 1.25408339 1.159174744 1.084931389 1 11.67017568 -8.178355681 1.955416678 1.016376398 1.26221863 0.403336141 0.105864559 0.38583283 2.638284986 0.11063772 0.033435793 6.63E-09 8.178355681 0.245842231 DIDHETVVEEQIIGENS(ph)PPDYSEYMTGK ddPTM_A459_MK2206_30min_R2 2 DIDHETVVEEQIIGENSPPDYSEYMTGK 28 0 P25490;A0A494C032;H0YJU4;H0YJV7 P25490 YY1 Transcriptional repressor protein YY1 1 DIDHETVVEEQIIGENS(0.99)PPDY(0.008)S(0.002)EYMTGK;DIDHETVVEEQIIGENS(0.998)PPDY(0.001)SEYMTGK 137.58 1.21E-12 9952700 67217 93511 75460 99952 94296 93325 106916 78629 80948 82593 TRUE FALSE 72363.1852 88867.37972 77975.79874 91785.60187 90593.46524 96876.54827 92877.80077 88906.08027 87988.71072 79897.99717 0.905694608 1.112260418 0.975941845 1.148784765 1.133864032 1.212502837 1.16245468 1.112744792 1.101263033 1 16.28587172 -3.666614458 0.776045177 1.12992415 1.46E-15 0.418642396 0.068932694 11.76517317 1.454229435 0.025049637 17.1843132 0.000215469 3.666614458 -1.12992415 DIDIHEVR ddPTM_A459_MK2206_30min_R1 4 DIDIHEVR 8 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;A0A1X7SBS1;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ;;; 150.36 0.0018196 88846500 45877.2 49809 53479 42987.5 54779 50549 62954 61746 50828 50426 FALSE TRUE 41975.10323 46566.42505 49848.99448 46298.4047 52597.03643 53411.0407 58754.45353 61206.16123 56111.75249 56673.15358 0.74065233 0.821666382 0.879587447 0.816937152 0.928076754 0.942439891 1.036724619 1.079985096 0.990094056 1 15.79037786 -6.537061667 0.913903941 1.038106515 0.796365805 0.84372636 0.040519508 0.213154837 0.389123999 0.022727953 0.026753735 2.90E-07 6.537061667 -0.24174071 DIDIHEVR ddPTM_A459_MK2206_30min_R2 6 DIDIHEVR 8 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;A0A1X7SBS1;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ;;;;; 120.87 0.01008 95827100 610585 743822 784494 842453 746032 780066 806092 695847 742286 751079 FALSE TRUE 657331.8571 706884.8811 810648.6384 773621.895 716739.0352 809751.9582 700251.1521 786796.5921 806848.6945 726571.3537 0.904703789 0.97290497 1.115717863 1.064756945 0.986467511 1.114483738 0.963774788 1.082889641 1.110487897 1 19.47074496 -5.021388048 4.591260807 1.054521876 0.915740728 0.462370236 0.052405527 0.149969221 8.123839753 0.013002255 0.045230716 9.52E-06 5.021388048 -0.138781148 DIDIS(ph)SPEFK ddPTM_A459_MK2206_30min_R2 4 DIDISSPEFK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 DIDIS(0.687)S(0.313)PEFK;DIDIS(0.674)S(0.326)PEFK;DIDIS(0.745)S(0.255)PEFK;DIDIS(0.5)S(0.5)PEFK 205.12 2.68E-09 23925400 392028 383190 395315 360886 393461 299579 458989 346611 335985 440086 TRUE FALSE 422041.9651 364161.3418 408494.6048 331400.4594 378011.7442 310979.6888 398723.193 391914.2478 365208.368 425726.0299 0.991346395 0.85538895 0.959524615 0.77843598 0.887922555 0.73046905 0.936572267 0.920578542 0.85784834 1 18.69956578 -9.990943722 6.88194639 1 0.877151531 0.183832815 0.07580585 0 0 0.07162974 0.017372764 1.02E-10 9.990943722 -0.122848469 DIDISS(ph)PEFK ddPTM_A459_MK2206_30min_R1 6 DIDISSPEFK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 DIDIS(0.139)S(0.861)PEFK;DIDIS(0.22)S(0.78)PEFK;DIDIS(0.331)S(0.669)PEFK;DIDIS(0.038)S(0.962)PEFK;DIDIS(0.123)S(0.877)PEFK;DIDIS(0.119)S(0.881)PEFK 237.76 4.89E-09 1059501000 75901.6 89859.5 83794.9 76211.5 60677.2 55260.1 68329 71569.8 70838.9 66504.1 TRUE FALSE 69445.77034 84009.63022 78107.13565 82081.32294 58260.29864 58388.87911 63770.89708 70944.07278 78202.85715 74743.12999 0.929125799 1.123977953 1.045007557 1.098178829 0.779473627 0.781193925 0.853200784 0.949171821 1.04628823 1 16.18965336 -6.246233213 24.88232144 0.890577581 1.054132572 0.369032991 0.093747896 819.1103776 1340335.147 0.029205408 0.037556768 5.67E-07 6.246233213 0.163554991 DIDISS(ph)PEFK ddPTM_A459_MK2206_30min_R2 7 DIDISSPEFK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 DIDIS(0.119)S(0.881)PEFK;DIDIS(0.046)S(0.954)PEFK;DIDIS(0.11)S(0.89)PEFK;DIDIS(0.397)S(0.603)PEFK;DIDIS(0.018)S(0.982)PEFK;DIDIS(0.118)S(0.882)PEFK;DIDIS(0.129)S(0.871)PEFK 242.97 1.91E-09 111927500 1842776 1953689 1956541 1832349 1920915 1438108.3 2248244 1607778 1628017 2179295 TRUE FALSE 1983860.347 1856671.645 2021771.1 1682640.225 1845490.225 1492836.519 1953046.862 1817920.105 1769618.976 2108184.783 0.941027733 0.880696825 0.959010385 0.798146462 0.875393011 0.708114645 0.926411612 0.862315353 0.839404112 1 21.00756989 -5.754016593 24.999334 0.850066257 0.922290161 0.142878224 0.074491156 304.7888395 1026491.225 0.019396866 0.032764443 1.76E-06 5.754016593 0.072223904 DIDNNLITST(ph)PR ddPTM_A459_MK2206_30min_R1 2 DIDNNLITSTPR 12 0 Q05D32;H0YMH7;Q05D32-2;H0YNU2;H0YNW9 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 DIDNNLIT(0.005)S(0.035)T(0.96)PR;DIDNNLITS(0.012)T(0.988)PR 153.32 0.0011041 26818000 8811.7 7818.2 6857.7 6421.2 7251.4 6749.9 7879 6356.4 5867.9 5894.2 TRUE FALSE 8062.218643 7309.233759 6392.218431 6915.761937 6962.561383 7132.073505 7353.406286 6300.826665 6477.889203 6624.417995 1.21704558 1.103377499 0.96494793 1.043980308 1.051044996 1.076633979 1.110045636 0.951151734 0.977880503 1 12.69357799 -4.90389754 3.294211332 1.027128299 1.221368163 0.608639424 0.048381107 0.197882211 3.761844301 0.013266686 0.08313818 1.25E-05 4.90389754 0.194239863 DIDNNLITST(ph)PR ddPTM_A459_MK2206_30min_R2 2 DIDNNLITSTPR 12 0 Q05D32;H0YMH7;Q05D32-2;H0YNU2;H0YNW9 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 DIDNNLITS(0.003)T(0.997)PR;DIDNNLIT(0.001)S(0.005)T(0.994)PR 185.32 0.00024443 19754300 105045 106436 94735 106993 107893 105066 101700 78113 87467 99104 TRUE FALSE 113087.326 101150.543 97893.41762 98251.32965 103656.5787 109064.3603 88346.66784 88322.6373 95074.72156 95870.2446 1.179587331 1.055077552 1.021103243 1.024836539 1.081217422 1.137624721 0.921523338 0.921272681 0.991702086 1 16.54879549 -7.270198351 24.99905123 0.952063912 1.076389781 0.58292976 0.051323673 496.0787807 1415855.9 0.022099228 0.015158046 5.37E-08 7.270198351 0.12432587 DIDPQNDLTFLR ddPTM_A459_MK2206_30min_R2 2 DIDPQNDLTFLR 12 0 H3BQI1;B1AKR6;Q9NP97;Q8TF09 H3BQI1 DYNLRB2;DYNLRB1 Dynein light chain roadblock-type 1;Dynein light chain roadblock-type 2 0 ; 161.67 0.0067076 3896500 22219 31106 25484 26247 26655 20343 27282 22269.6 21683 22394 FALSE TRUE 23920.10372 29561.32127 26333.62384 24102.53614 25608.39077 21117.16712 23699.84063 25180.31318 23568.94815 21663.28561 1.104177093 1.364581615 1.215587714 1.112598364 1.182110194 0.974790597 1.094009517 1.162349684 1.087967383 1 14.40296445 -5.888982686 1.886112711 1.085351695 1.245618218 0.375642093 0.083300251 0.348558721 2.5249127 0.026011687 0.046415162 1.29E-06 5.888982686 0.160266523 DIDTHTHR ddPTM_A459_MK2206_30min_R2 4 DIDTHTHR 8 0 Q86XP3-2;Q86XP3;A0A0A0MSJ0 Q86XP3-2 DDX42 ATP-dependent RNA helicase DDX42 0 ;;; 151.44 0.0016048 8661400 79480 74846 72755 75949 88530 70793 78003 102198 97186 90012 FALSE TRUE 85565.04991 71129.25648 75180.61539 69743.72375 85053.86737 73487.07722 67761.1124 115555.6295 105639.0626 87074.91581 0.982660151 0.816874249 0.863401528 0.800962287 0.976789545 0.84395232 0.778193258 1.327082874 1.213197413 1 16.40996955 -7.757548069 24.99988593 1.202605129 0.865018443 0.67844264 0.098688556 49.43877042 317628.0564 0.046210286 0.025387062 1.75E-08 7.757548069 -0.337586686 DIEDVFYK ddPTM_A459_MK2206_30min_R2 2 DIEDVFYK 8 0 J3KTL2;Q07955;Q07955-3;Q07955-2;J3QQV5;J3KSW7 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 0 ; 141.47 0.0027328 2111900 39951 44500 39076 42726 39332 37802 45294 34770 36174 42635 FALSE TRUE 43009.67928 42290.19471 40378.77434 39235.14913 37787.62805 39240.5816 39346.84339 39314.55838 39320.34913 41243.82344 1.042815037 1.025370375 0.979025972 0.951297573 0.916200897 0.951429289 0.954005718 0.953222934 0.953363337 1 15.33189046 -5.33110082 2.109286402 0.950618557 1.041597358 0.7300399 0.01921801 0.163171733 1.352024247 0.00531963 0.017796295 4.67E-06 5.33110082 0.090978801 DIEEHLQR ddPTM_A459_MK2206_30min_R1 1 DIEEHLQR 8 0 Q9UNE7;H3BTA3;Q9UNE7-2 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 0 98.033 0.027802 3398000 3089 3374 3329.3 3341.5 3452.1 3614 3983.2 3416.2 3041.8 3201.1 FALSE TRUE 2826.264329 3154.351987 3103.316392 3598.862909 3314.595547 3818.621557 3717.487996 3386.332524 3358.005995 3597.676435 0.785580466 0.876774786 0.862589076 1.000329789 0.921315634 1.061413283 1.033302484 0.941255442 0.93338188 1 11.81284973 -5.414235325 1.152442421 0.988827934 0.79222692 0.658338826 0.04708565 0.444664985 0.95130615 0.016445829 0.081308798 3.85E-06 5.414235325 -0.196601014 DIEIS(ph)TEEEKDTGDLK ddPTM_A459_MK2206_30min_R2 1 DIEISTEEEKDTGDLK 16 1 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 1 DIEIS(0.493)T(0.493)EEEKDT(0.014)GDLK 59.864 0.04125 5455000 32330 22623 26809 22173 22906 13202 28545 21812 16581 29132 TRUE FALSE 34805.20966 21499.57472 27702.79868 20361.39497 22006.59535 13704.41136 24797.00721 24662.90329 18023.18541 28181.42523 1.235040789 0.762898773 0.983016241 0.722511186 0.780890078 0.486292345 0.879906073 0.875147481 0.639541303 1 14.78245695 -2.437381255 1.268633177 0.772675305 200 0.424588666 0.150445912 617.6899761 2.998677732 0.042829578 355936.9901 0.00365274 2.437381255 199.2273247 DIIDYES(ph)DVEPETKR ddPTM_A459_MK2206_30min_R1 2 DIIDYESDVEPETKR 15 1 F5GYN7;Q5FWF4-2;Q5FWF4-3;Q5FWF4 F5GYN7 ZRANB3 DNA annealing helicase and endonuclease ZRANB3;DNA annealing helicase ZRANB3;Endonuclease ZRANB3 1 DIIDYES(1)DVEPETKR;DIIDYES(1)DVEPETKR 130.95 0.00038658 12022000 9264.4 8995.4 9244 8070.9 8914.1 7707.4 8712.5 8606.6 8014.1 6985.2 TRUE FALSE 8476.414131 8409.797825 8616.543035 8692.522116 8559.032521 8143.786327 8131.305022 8531.353404 8847.194374 7850.579312 1.079718298 1.07123277 1.097567796 1.107245946 1.090242157 1.037348456 1.035758598 1.086716415 1.126947964 1 12.9385834 -6.719077664 24.50156777 1.061424324 1.089670459 0.18563941 0.032794739 239.0212358 138246.332 0.011144099 0.011143993 1.91E-07 6.719077664 0.028246134 DIIDYES(ph)DVEPETKR ddPTM_A459_MK2206_30min_R2 2 DIIDYESDVEPETKR 15 1 F5GYN7;Q5FWF4-2;Q5FWF4-3;Q5FWF4 F5GYN7 ZRANB3 DNA annealing helicase and endonuclease ZRANB3;DNA annealing helicase ZRANB3;Endonuclease ZRANB3 1 DIIDYES(0.999)DVEPET(0.001)KR;DIIDYES(1)DVEPETKR 102.72 0.00314 8161000 44067 51653 41974 48259 44369 46665 53221 43062 35969 44758 TRUE FALSE 47440.8034 49087.98713 43373.39221 44316.08533 42626.85012 48440.86927 46233.01877 48690.35125 39097.5186 43297.55013 1.095692557 1.133735904 1.001751648 1.023524084 0.984509516 1.118790073 1.067797569 1.124552108 0.902996093 1 15.40199778 -5.254899983 24.75636971 1.035390594 1.114714236 0.227735875 0.062706608 708.5856458 2682489.165 0.015891598 0.039963991 5.56E-06 5.254899983 0.079323642 DIIHDPGR ddPTM_A459_MK2206_30min_R1 3 DIIHDPGR 8 0 G3V1A1;E9PKZ0;P62917;E9PKU4 G3V1A1 RPL8 60S ribosomal protein L8 0 ;; 97.431 0.028487 93238000 33971 34238 33567 28959.9 35003.6 31998.4 33634 32354 28383.3 24495.9 FALSE TRUE 31081.58806 32009.09998 31288.56556 31190.39652 33609.33249 33810.12176 31390.33723 32071.13239 31333.84561 27530.63703 1.128981797 1.16267197 1.136499876 1.132934065 1.220797487 1.228090789 1.140196545 1.164925183 1.138144591 1 14.74875037 -8.978178689 1.483701525 0.999992404 1.166193314 0.688969741 0.032959645 1.354165862 3.753487392 0.034384216 0.00995787 1.05E-09 8.978178689 0.16620091 DIIHDPGR ddPTM_A459_MK2206_30min_R2 3 DIIHDPGR 8 0 G3V1A1;E9PKZ0;P62917;E9PKU4 G3V1A1 RPL8 60S ribosomal protein L8 0 ;; 99.136 0.026549 85722000 377969 425397 369763 450378 452824 437965 464729 346466 398858 399825 FALSE TRUE 406906.5972 404272.4036 382090.7139 413580.6767 435043.8545 454632.065 403709.5241 391750.2958 433549.9479 386778.743 1.052039712 1.045229116 0.9878793 1.06929526 1.124787394 1.17543188 1.043773815 1.012853738 1.120924962 1 18.56114898 -3.395382026 19.45942223 1.065441557 1.06120373 0 0.057301555 0 0 0.013853455 0 0.000402363 3.395382026 -0.004237826 DIIIFVGT(ph)PVQK ddPTM_A459_MK2206_30min_R1 1 DIIIFVGTPVQK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 DIIIFVGT(1)PVQK 131.35 0.0047652 5832800 6098.7 5416.7 4414.2 3488.8 4055.9 4258.1 3894.7 3035.2 5143.6 4455.3 TRUE FALSE 5579.973539 5064.071845 4114.576403 3757.507981 3894.344914 4499.189942 3634.891669 3008.663566 5678.295627 5007.2562 1.114377479 1.011346662 0.821722764 0.750412567 0.777740295 0.898534 0.725924843 0.60086072 1.1340134 1 12.28980456 -5.122870168 2.843816046 0.816228226 1.104563549 0.28618908 0.142288585 0.314887595 4.676770417 0.036244348 0.142001634 7.54E-06 5.122870168 0.288335323 DIIIFVGT(ph)PVQK ddPTM_A459_MK2206_30min_R2 2 DIIIFVGTPVQK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 DIIIFVGT(1)PVQK;DIIIFVGT(1)PVQK 132.06 0.0045307 7473700 109678 71126 63705 87292 59186 53810 87974 69209 35985 67350 TRUE FALSE 118075.032 67593.98627 65828.8929 80159.96437 56862.06025 55857.77726 76422.90812 78254.85393 39114.91025 65152.37502 1.812290526 1.037475399 1.010383626 1.230346006 0.872754988 0.857340615 1.172987295 1.201105162 0.600360466 1 15.99153015 -4.761177819 5.899609674 1.007142685 1.843936198 0.65027197 0.179159307 0.085479902 11.01338377 0.043832519 0.290011591 1.73E-05 4.761177819 0.836793513 DIIRQPS(ph)EEEIIK ddPTM_A459_MK2206_30min_R1 2 DIIRQPSEEEIIK 13 1 Q15121-2;Q15121;B1AKZ5 Q15121-2 PEA15 Astrocytic phosphoprotein PEA-15 1 DIIRQPS(1)EEEIIK;DIIRQPS(1)EEEIIK 130.47 0.0076985 8403300 3034.2 2511.2 2825.7 4105.3 3842.4 2566.9 2158.72 3047.5 1636.65 1154.64 TRUE FALSE 2776.125357 2347.720424 2633.899357 4421.490917 3689.349072 2712.23566 2014.715728 3020.856029 1806.785624 1297.68552 2.139289769 1.809159759 2.029690026 3.407212956 2.843022453 2.090056194 1.552545433 2.327879892 1.392313928 1 10.34172509 -8.283025799 0.818635258 1.006297779 2.386320684 0.447378579 0.492982792 0.628479491 0.916226371 0.522078945 0.198564798 5.21E-09 8.283025799 1.380022904 DIISDT(ph)SGDFR ddPTM_A459_MK2206_30min_R1 1 DIISDTSGDFR 11 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 DIIS(0.009)DT(0.944)S(0.047)GDFR 103.46 0.022327 0 665.37 746.18 805.99 673.1 685.99 806.45 1019.1 814.44 979.78 1214.6 TRUE FALSE 608.7767875 697.6035464 751.2816444 724.9422786 658.6655657 852.1105021 951.1176985 807.3194369 1081.631637 1365.073818 0.445966203 0.511037233 0.55035972 0.531064525 0.482512782 0.624223021 0.696751843 0.591410828 0.79236128 1 10.41476325 -8.726409113 0.326545934 1.067454573 0.459998941 0.901851335 0.049987777 0.644671732 0.173916406 0.130533711 0.060347662 1.88E-09 8.726409113 -0.607455632 down DIISDTSGDFR ddPTM_A459_MK2206_30min_R1 1 DIISDTSGDFR 11 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 185.33 0.000279 39854000 3785.2 4573.1 3825.8 2518.1 3203.7 3630.8 4548.1 3088.5 4895.5 6007.8 FALSE TRUE 3463.248863 4275.390359 3566.115355 2712.044498 3076.089845 3836.372758 4244.704547 3061.49757 5404.404744 6752.091621 0.512914969 0.633194956 0.528149728 0.401659908 0.455575845 0.568175459 0.628650318 0.453414696 0.800404534 1 12.72111877 -8.47349613 3.41174783 0.998175683 0.525866243 0.827212666 0.071696295 0.086128661 2.170844025 0.073712212 0.019521436 3.36E-09 8.47349613 -0.472309441 DIISDTSGDFR ddPTM_A459_MK2206_30min_R2 4 DIISDTSGDFR 11 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;; 160.53 0.0075301 210923000 612373 478978 519399 579973 403795 440335 597870 491350 418798 588674 FALSE TRUE 659256.7477 455192.649 536715.5034 532587.3507 387939.9794 457092.257 519368.9508 555571.1321 455224.293 569465.6156 1.157676126 0.799332983 0.942489746 0.935240577 0.681235124 0.802668756 0.91202864 0.975600838 0.799388551 1 19.11924921 -4.752955888 24.99098455 0.868538103 1.157676669 0.450262066 0.094628941 305.1249874 898779.6569 0.023935349 0.270333043 1.77E-05 4.752955888 0.289138567 DIISDTSGDFRK ddPTM_A459_MK2206_30min_R1 2 DIISDTSGDFRK 12 1 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 171.67 0.00034688 91713000 9465.3 10090.6 9674.7 8023 8741.4 7986.6 10181.8 9301.3 9381.2 9214.2 FALSE TRUE 8660.226531 9433.700106 9018.008319 8640.93285 8393.211528 8438.79439 9502.5907 9219.979715 10356.40931 10355.72466 0.836274314 0.910964748 0.870823493 0.83441122 0.810490024 0.814891731 0.917617165 0.89032685 1.000066113 1 13.33814089 -8.06610063 1.448212885 1.00662448 0.850969108 0.743029734 0.033512243 0.222887538 0.840274118 0.032630095 0.010652732 8.59E-09 8.06610063 -0.155655372 DIISDTSGDFRK ddPTM_A459_MK2206_30min_R2 3 DIISDTSGDFRK 12 1 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;; 177.04 0.00014019 67824000 198294 233723 220853 226001 195530 185870 242734 185597 214284 234996 FALSE TRUE 213475.5411 222116.6557 228216.1288 207535.9954 187852.5097 192943.4131 210862.7342 209855.1651 232922.035 227328.0998 0.939063588 0.977075231 1.003906376 0.912935953 0.826349712 0.84874423 0.927570038 0.923137814 1.02460732 1 17.7944165 -10.36782382 6.030331398 1.000000008 0.928526181 0.107383093 0.058702641 6.79E-09 1.32E-09 0.062966331 0.015271577 4.29E-11 10.36782382 -0.071473827 DIISIAEDEDLR ddPTM_A459_MK2206_30min_R2 4 DIISIAEDEDLR 12 0 P12956;B1AHC9;P12956-2 P12956 XRCC6 X-ray repair cross-complementing protein 6 0 ;;; 202.03 0.00096827 12710400 30272.1 34072 31703.8 36922.1 32805.5 33501.1 37011.7 31965.4 29698.6 35977.8 FALSE TRUE 32589.75525 32380.03403 32760.78887 33905.44632 31517.39124 34776.00784 32152.01933 36143.38753 32281.73055 34803.84733 0.936383697 0.930357892 0.941297913 0.974186733 0.905572046 0.999200103 0.92380647 1.038488279 0.927533391 1 15.08695917 -6.80437379 0.232506725 1.004275623 0.911059267 0.190513818 0.036609899 6.078302402 0.770014525 0.077955395 0.183606269 1.57E-07 6.80437379 -0.093216356 DIKEES(ph)DEEEEDDEESGR ddPTM_A459_MK2206_30min_R1 2 DIKEESDEEEEDDEESGR 18 1 Q96EV2;A8MTF7;Q96EV2-2;H7BXM6;H7C0H2 Q96EV2 RBM33 RNA-binding protein 33 1 DIKEES(1)DEEEEDDEESGR;DIKEES(1)DEEEEDDEESGR 111.38 0.00072101 26209000 3324.1 4489.9 4724.8 4084.4 3385.1 3293.4 3921.2 3534.5 4349.5 4112.6 TRUE FALSE 3041.367839 4197.606694 4404.09374 4398.981196 3250.264299 3479.869462 3659.623903 3503.598239 4801.64609 4622.099937 0.658005643 0.90816009 0.95283395 0.951727841 0.703200784 0.752876292 0.791766503 0.758010058 1.038845147 1 12.17433274 -8.268225852 24.82811146 1.019422612 0.816343631 0.432288108 0.095942901 557.5839869 2039872.712 0.091413591 0.025727067 5.39E-09 8.268225852 -0.203078982 DIKEES(ph)DEEEEDDEESGR ddPTM_A459_MK2206_30min_R2 2 DIKEESDEEEEDDEESGR 18 1 Q96EV2;A8MTF7;Q96EV2-2;H7BXM6;H7C0H2 Q96EV2 RBM33 RNA-binding protein 33 1 DIKEES(0.999)DEEEEDDEES(0.001)GR;DIKEES(1)DEEEEDDEESGR 79.029 0.0068409 43888000 98974 81670 98059 73981 87185 61652 94578 78038 53718 108630 TRUE FALSE 106551.5255 77614.38656 101328.2381 67936.51565 83761.67883 63998.21006 82159.79499 88237.83454 58390.29454 105085.412 1.013951637 0.738583835 0.964246475 0.64648855 0.79708189 0.609011364 0.781838254 0.839677296 0.555646054 1 16.68120288 -1.522878745 0.840476185 0.748415199 80.76757379 0.202735921 0.13772103 958.7587907 2.784268376 0.044803235 146583.5816 0.03 1.522878745 80.01915859 DILETHLR ddPTM_A459_MK2206_30min_R1 1 DILETHLR 8 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 0 97.431 0.028487 2386400 4139.9 3970.6 3946.3 3433.1 3869.3 3385.6 4354.5 3336.1 3814.8 3778.5 FALSE TRUE 3787.779766 3712.113218 3678.436151 3697.517957 3715.177588 3577.289746 4064.01925 3306.932829 4211.362111 4246.609106 0.89195395 0.87413584 0.866205497 0.870698919 0.874857444 0.842387339 0.957003376 0.778723152 0.991699967 1 12.0520956 -8.373760677 8.688007879 0.998972933 0.871841104 0.596550695 0.041543722 0.213603551 14.97495686 0.036218875 0.009359754 4.23E-09 8.373760677 -0.127131829 DINAYNCEEPTEKLPFPIIDDR ddPTM_A459_MK2206_30min_R2 1 DINAYNCEEPTEKLPFPIIDDR 22 1 P30041 P30041 PRDX6 Peroxiredoxin-6 0 63.936 0.022168 2000300 10460 10832 12633 13531 13076 12221 15391 12218 12095 14172 FALSE TRUE 11260.82564 10294.09863 13054.17791 12425.47402 12562.57054 12686.07872 13370.14321 13814.93455 13147.00124 13709.5688 0.821384378 0.750869614 0.952194639 0.906335874 0.916335934 0.925344838 0.975241702 1.007685563 0.958965335 1 13.74289558 -3.829493081 0.334854935 0.998785651 0.417029382 0.716277544 0.040647418 6.682856528 0.366954204 0.038433539 1.780004892 0.000148084 3.829493081 -0.581756268 DINTFVGT(ph)PVEK ddPTM_A459_MK2206_30min_R2 3 DINTFVGTPVEK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 DINT(0.001)FVGT(0.999)PVEK;DINTFVGT(1)PVEK;DINTFVGT(1)PVEK 147.75 0.0014527 47560900 310596 285352 227229 317286 221336 203873 303441 251651 146597 268035 TRUE FALSE 334375.4686 271181.8346 234804.7014 291362.7189 212645.2365 211631.5299 263598.8322 284542.6497 159347.7421 259289.0399 1.289585818 1.04586694 0.905571256 1.123698553 0.820108851 0.816199288 1.016621575 1.097395593 0.614556412 1 17.9842017 -1.5228788 0.823354509 0.917320198 110.3298446 0.384915198 0.141895615 611.3254229 1.917696575 0.048880968 125020.5766 0.029999996 1.5228788 109.4125244 DINVSVGSQQPDT(ph)KDSPVCPHFTTNGNENSSIEK ddPTM_A459_MK2206_30min_R1 1 DINVSVGSQQPDTKDSPVCPHFTTNGNENSSIEK 34 1 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494BZW2 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 DINVSVGS(0.006)QQPDT(0.497)KDS(0.497)PVCPHFTTNGNENSSIEK 83.559 4.11E-07 5603200 315.56 146.64 256.03 154.94 340.26 163.26 60.387 328.51 202.88 236.05 TRUE FALSE 288.7199649 137.0937093 238.6513969 166.8735056 326.7067237 172.5036401 56.35869341 325.6378717 223.970102 265.2936561 1.088303313 0.516762109 0.899574458 0.629014309 1.231490901 0.650236582 0.212438904 1.227461962 0.844234669 1 8.051446367 DINVSVGSQQPDT(ph)KDSPVCPHFTTNGNENSSIEK ddPTM_A459_MK2206_30min_R2 1 DINVSVGSQQPDTKDSPVCPHFTTNGNENSSIEK 34 1 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494BZW2 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 DINVSVGSQQPDT(0.497)KDS(0.497)PVCPHFT(0.004)TNGNENSSIEK 92.142 2.94E-09 7688900 23228 30688 27388 28963 27057 22423 26484 21408 24096 20713 TRUE FALSE 25006.35354 29164.07854 28301.10225 26596.63025 25994.60623 23276.32298 23006.61899 24206.0991 26191.82652 20037.13651 1.248000358 1.455501316 1.412432472 1.327366824 1.297321412 1.161659151 1.148198944 1.208061796 1.307164151 1 14.29038873 -6.508007929 2.112015541 1.176204446 1.374574515 0.525964329 0.087660838 0.262079487 2.34436238 0.03132356 0.034150219 3.10E-07 6.508007929 0.198370069 DIS(ph)LDSELHDLR ddPTM_A459_MK2206_30min_R1 3 DISLDSELHDLR 12 0 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 DIS(1)LDSELHDLR;DIS(0.998)LDS(0.002)ELHDLR;DIS(1)LDSELHDLR 157.35 0.00029361 17936800 5124.7 5268.9 5865.3 4581.1 6272.4 5179.2 6154.9 5896.6 4496.04 4449.2 TRUE FALSE 4688.817354 4925.893652 5467.179778 4933.937116 6022.557026 5472.441828 5744.317851 5845.046648 4963.419447 5000.400486 0.937688365 0.985099827 1.093348381 0.986708391 1.204414935 1.094400707 1.148771557 1.168915703 0.992604385 1 12.28782793 -5.024468935 1.020781438 1.105050884 0.886286566 0.320610758 0.072310765 1.417566087 1.56559255 0.023604387 0.310692808 9.45E-06 5.024468935 -0.218764318 DIS(ph)LDSELHDLR ddPTM_A459_MK2206_30min_R2 1 DISLDSELHDLR 12 0 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 DIS(0.992)LDS(0.008)ELHDLR 115.83 0.0031759 0 1220.9 2558.2 799.95 1126 892.59 2273.1 1146.1 1024.4 1172 511.72 TRUE FALSE 1314.373043 2431.163508 826.6199337 1034.002198 857.5424317 2359.604413 995.6156933 1158.292597 1273.938442 495.0226183 2.655177752 4.911217019 1.669862958 2.088797885 1.732329797 4.766659797 2.011252934 2.339878128 2.573495421 1 8.951350635 -10.37845602 0.228308708 9.77E-24 3.170612195 0.202382893 1.089691576 26.95745273 1.515163878 21.83273254 2.432506843 4.18E-11 10.37845602 3.170612195 DIS(ph)LSDYK ddPTM_A459_MK2206_30min_R1 2 DISLSDYK 8 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 1 DIS(0.884)LS(0.115)DY(0.001)K;DIS(0.831)LS(0.166)DY(0.004)K 96.015 0.02142 11081900 7769 9386.3 8690.2 6912.2 6794.9 7552 9178.2 8075.5 7940.9 7255.2 TRUE FALSE 7108.205753 8775.250164 8100.333436 7444.578842 6524.244745 7979.587714 8565.939025 8004.896755 8766.384972 8154.02895 0.87174154 1.076185799 0.993414849 0.912993918 0.800125286 0.978606743 1.050516141 0.981710613 1.075098583 1 12.99329736 -7.001110179 24.98583513 1.02377212 0.936235546 0.281659688 0.071947989 64.64962701 1455046.417 0.027310039 0.023769242 9.97E-08 7.001110179 -0.087536574 DISEGGESPVVQS(ph)DEEEVQVDTALATSHTDR ddPTM_A459_MK2206_30min_R1 2 DISEGGESPVVQSDEEEVQVDTALATSHTDR 31 0 D6RJC6;A0A087WYP9;A6NFV8;Q96EV8-3;Q96EV8 D6RJC6 DTNBP1 Dysbindin 1 DISEGGES(0.001)PVVQS(0.999)DEEEVQVDTALATSHTDR;DISEGGESPVVQS(1)DEEEVQVDTALATSHTDR 129.54 2.88E-18 13113800 1584.59 1582.68 1579.91 1545.66 1955.44 1878.33 1733.6 1642.88 1415.02 1591.51 TRUE FALSE 1449.812299 1479.647244 1472.670111 1664.707001 1877.550684 1984.679421 1617.954707 1628.516473 1562.116393 1788.678274 0.81054951 0.827229394 0.823328674 0.930691128 1.049686079 1.10957876 0.904553228 0.910458016 0.873335588 1 10.8046782 -5.844601787 3.81142947 0.974519638 0.819743754 0.517710427 0.066450334 0.203584084 5.703676782 0.021553934 0.034114082 1.43E-06 5.844601787 -0.154775884 DISGPS(ph)PSK ddPTM_A459_MK2206_30min_R1 4 DISGPSPSK 9 0 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 DIS(0.006)GPS(0.979)PS(0.015)K;DIS(0.008)GPS(0.897)PS(0.095)K;DIS(0.023)GPS(0.96)PS(0.016)K;DISGPS(0.582)PS(0.417)K 132.56 0.0033326 223893000 28964.1 32668.9 31712.7 25341.8 21281.3 20719.8 25392 24368.8 26672.3 27993.5 TRUE FALSE 26500.5512 30542.14867 29560.13028 27293.62983 20433.62076 21892.93717 23698.14601 24155.74615 29444.98103 31461.54612 0.842315603 0.970777105 0.939563814 0.867523475 0.64947923 0.695863359 0.753241621 0.767786366 0.935903815 1 14.94130195 -6.010287493 22.28089625 0.779123501 0.919652952 0.192268606 0.103390508 154.5435509 334720.6676 0.029664276 0.041062999 9.77E-07 6.010287493 0.140529452 DISGPS(ph)PSK ddPTM_A459_MK2206_30min_R2 2 DISGPSPSK 9 0 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 DIS(0.001)GPS(0.875)PS(0.124)K;DIS(0.074)GPS(0.881)PS(0.044)K 121.29 0.0063098 245590000 552820 568350 509100 552040 527460 375920 577170 517420 413390 546560 TRUE FALSE 595144.3242 540126.5655 526073.1399 506936.5661 506749.2701 390225.899 501386.8857 585048.5706 449345.915 528725.792 1.125619997 1.021562734 0.994982934 0.958789175 0.958434935 0.738049675 0.948292845 1.106525499 0.849865699 1 19.01216018 -4.77772984 1.017543036 0.933756081 1.219368312 0.296642077 0.090328102 2.602288119 2.147058881 0.031011774 0.818372795 1.67E-05 4.77772984 0.285612231 DISGPS(ph)PSKK ddPTM_A459_MK2206_30min_R2 1 DISGPSPSKK 10 1 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 DIS(0.002)GPS(0.851)PS(0.147)KK 120.87 0.0088945 22161000 85130 72512 72062 79165 74944 54199 81395 60525 52218 78611 TRUE FALSE 91647.61825 68911.15952 74464.51111 72696.96626 72001.322 56261.58092 70707.73873 68435.82531 56759.82725 76045.92951 1.205161392 0.906178147 0.979204431 0.955961308 0.946813623 0.73983685 0.92980307 0.899927527 0.746388763 1 16.21458341 -1.522878745 0.829970147 0.880682521 92.38795029 0.517067726 0.08661053 482.104631 1.464539194 0.02970756 83170.654 0.03 1.522878745 91.50726777 DISGPSPS(ph)KK ddPTM_A459_MK2206_30min_R1 1 DISGPSPSKK 10 1 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 DIS(0.003)GPS(0.241)PS(0.756)KK 160.86 0.00078136 94239000 4912.6 5638.4 5254 4397.8 3266.2 2685.4 3913.6 4188.5 3854.7 3815.4 TRUE FALSE 4494.757573 5271.339135 4897.373118 4736.519318 3136.100338 2837.445027 3652.530885 4151.880386 4255.409859 4288.080557 1.048198026 1.229300398 1.142089812 1.10457797 0.731352944 0.661705159 0.851786909 0.968237497 0.992381044 1 12.06611629 -6.150108852 5.93156017 0.855591676 1.144036531 0.576095717 0.110562097 0.176657297 8.150784913 0.035932669 0.046723449 7.08E-07 6.150108852 0.288444855 DITDPLSLNTCT(ph)DEGHVVLASPLK ddPTM_A459_MK2206_30min_R2 1 DITDPLSLNTCTDEGHVVLASPLK 24 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 DITDPLS(0.009)LNT(0.074)CT(0.896)DEGHVVLAS(0.021)PLK 63.606 0.0051085 4449300 18953 21219 18944 17918 23916 18841 23731 17130 20006 24275 TRUE FALSE 20404.05625 20165.29532 19575.5835 16454.04208 22976.93767 19558.00746 20615.09119 19368.94982 21746.08572 23482.90874 0.868889646 0.858722211 0.833609828 0.700681601 0.978453646 0.832861366 0.877876392 0.824810505 0.926038846 1 14.5193235 -8.507764325 3.307212993 0.999639027 0.847187104 0.368895233 0.064248459 0.228390715 6.169202151 0.060692222 0.016086997 3.11E-09 8.507764325 -0.152451923 DITDPLSLNTCTDEGHVVLAS(ph)PLK ddPTM_A459_MK2206_30min_R1 4 DITDPLSLNTCTDEGHVVLASPLK 24 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLS(0.014)LNT(0.002)CT(0.025)DEGHVVLAS(0.959)PLK;DITDPLSLNT(0.009)CT(0.086)DEGHVVLAS(0.905)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK 206.96 8.10E-32 364048000 53539.2 53610.3 54392.1 44547.4 42258.4 39908.3 45242.1 48052.8 46656.2 44594.1 TRUE FALSE 48985.40989 50120.25973 50700.1158 47978.44847 40575.15844 42167.87346 42224.08206 47632.67944 51506.27895 50118.75378 0.97738683 1.000030048 1.01159969 0.957295321 0.809580354 0.841359178 0.842480686 0.950396326 1.02768475 1 15.61306292 -6.007976673 22.57645503 0.900709804 0.994664637 0.23706506 0.066544527 143.4617793 406051.0532 0.020414538 0.028731719 9.82E-07 6.007976673 0.093954833 DITDPLSLNTCTDEGHVVLAS(ph)PLK ddPTM_A459_MK2206_30min_R2 5 DITDPLSLNTCTDEGHVVLASPLK 24 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 DITDPLSLNTCT(0.024)DEGHVVLAS(0.976)PLK;DITDPLSLNTCTDEGHVVLAS(0.999)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK 154.34 1.19E-10 226440300 285212 293090 289727 279955 316976 238974 348321 254184 247884 323333 TRUE FALSE 307048.05 278535.5768 299386.3536 257081.781 304529.9296 248068.323 302586.0343 287406.7215 269444.5022 312782.6707 0.981665798 0.89050834 0.957170526 0.821918236 0.973615095 0.793101237 0.967400252 0.918870348 0.861443192 1 18.25480106 -10.79123259 5.754708815 1.000005762 0.90646068 0.165791788 0.062356623 4.24E-06 5.40E-07 0.055588948 0.01348147 1.62E-11 10.79123259 -0.093545082 DITQDNS(ph)ELK ddPTM_A459_MK2206_30min_R1 3 DITQDNSELK 10 0 Q6NXT6-2;Q6NXT6 Q6NXT6-2 TAPT1 Transmembrane anterior posterior transformation protein 1 homolog 1 DIT(0.001)QDNS(0.999)ELK;DIT(0.002)QDNS(0.998)ELK;DITQDNS(1)ELK 107.66 0.011152 72131000 8039.8 7974.9 7334.4 7269.7 7600.7 7463.3 7920.5 7337.9 6295.8 6508.2 TRUE FALSE 7355.972791 7455.73256 6836.561363 7829.613554 7297.948024 7885.865596 7392.137897 7273.745514 6950.27094 7314.48495 1.005672011 1.019310671 0.934660664 1.07042582 0.997739154 1.07811632 1.010616325 0.994430307 0.950206472 1 12.83654057 -7.912843406 3.497877168 0.974324265 1.017282838 0.155653589 0.038974323 0.425119691 10.06588378 0.024677986 0.010421519 1.22E-08 7.912843406 0.042958573 DITQDNS(ph)ELK ddPTM_A459_MK2206_30min_R2 2 DITQDNSELK 10 0 Q6NXT6-2;Q6NXT6 Q6NXT6-2 TAPT1 Transmembrane anterior posterior transformation protein 1 homolog 1 DITQDNS(1)ELK;DITQDNS(1)ELK 112.17 0.0084012 8134900 14750.6 19251.5 15643.4 21205.3 21122 19103.3 24971 16294.4 17740.8 20695 TRUE FALSE 15879.91728 18295.4985 16164.94315 19472.75916 20292.64415 19830.28947 21692.2777 18424.13403 19283.86272 20019.72384 0.793213603 0.91387367 0.807450856 0.97267871 1.013632571 0.990537613 1.083545301 0.92029911 0.963243193 1 14.28913445 -5.842629594 5.738026324 0.994884769 0.846186164 0.675243768 0.048900859 0.120861425 6.488261451 0.013791376 0.020864608 1.44E-06 5.842629594 -0.148698605 DITSDT(ph)SGDFR ddPTM_A459_MK2206_30min_R1 1 DITSDTSGDFR 11 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 1 DITS(0.005)DT(0.988)S(0.006)GDFR 114.87 0.014832 2538800 1527 1234.2 1446.5 1626.9 1600 1575.4 1880.6 1412.2 1284.2 997.45 TRUE FALSE 1397.120631 1153.853356 1348.31561 1752.20412 1536.268612 1664.597787 1755.148605 1399.853284 1417.697186 1121.021636 1.246292298 1.02928732 1.202756099 1.563042196 1.370418342 1.48489354 1.565668805 1.248729943 1.264647478 1 10.13059841 -5.541415401 21.8688665 1.381835284 1.132347742 0.223590568 0.166803798 63.47247738 74881.49666 0.043960392 0.076178062 2.87E-06 5.541415401 -0.249487542 DITSDTS(ph)GDFR ddPTM_A459_MK2206_30min_R1 2 DITSDTSGDFR 11 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 1 DIT(0.002)S(0.024)DT(0.114)S(0.86)GDFR;DITSDT(0.129)S(0.871)GDFR 121.68 0.0043711 12365300 6449.6 5629.6 5816.4 5379.7 6597.2 6498.3 7254.5 6020.8 4716.7 4448 TRUE FALSE 5901.027652 5263.112017 5421.598973 5794.045426 6334.419554 6866.22813 6770.565542 5968.16078 5207.017844 4999.051821 1.180429382 1.052822056 1.08452546 1.159028879 1.267124203 1.373506092 1.354369945 1.193858554 1.041601094 1 12.28743877 -6.01758401 4.226241981 1.230146539 1.102053376 0.104469353 0.116692269 0.364008908 15.36036881 0.035894768 0.050584791 9.60E-07 6.01758401 -0.128093164 DITSDTSGDFR ddPTM_A459_MK2206_30min_R1 3 DITSDTSGDFR 11 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 ;; 266.03 6.82E-22 252466000 9846.2 10009.3 9822.3 8798.8 10588.6 9563.4 9779.1 9810.5 8185.7 7150.4 FALSE TRUE 9008.728986 9357.692751 9155.589642 9476.485101 10166.83364 10104.87144 9126.754082 9724.727833 9036.632808 8036.245535 1.121012163 1.164435894 1.139286947 1.179217964 1.265122326 1.257411984 1.135698759 1.210108351 1.124484409 1 12.97230593 -11.037466 6.529895341 0.999877789 1.180635842 0.534389801 0.049601067 9.33E-05 6.94E-06 0.050773581 0.012306118 9.17E-12 11.037466 0.180758052 DITSDTSGDFR ddPTM_A459_MK2206_30min_R2 4 DITSDTSGDFR 11 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 ;;; 183.67 0.00040854 436390000 653500 804820 737840 849870 748640 775300 863500 659880 693240 704730 FALSE TRUE 703532.4625 764853.8091 762439.2173 780432.9024 719244.632 804804.5848 750121.4128 746128.5817 753536.7621 681734.7178 1.03197394 1.121922926 1.118381091 1.14477506 1.055021276 1.18052457 1.100312766 1.094455896 1.105322558 1 19.37885093 -9.503465642 1.053800144 0.999206406 1.109264882 0.388761309 0.039706376 8.660121127 8.322300321 0.061075252 0.011486297 3.14E-10 9.503465642 0.110058476 DIVLVAYS(ph)ALGSHR ddPTM_A459_MK2206_30min_R2 1 DIVLVAYSALGSHR 14 0 P52895;B4DK69;H0Y804;Q04828 P52895;Q04828 AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 1 DIVLVAYS(0.999)ALGS(0.001)HR 89.669 0.012717 3762200 26405 20601 21042 24216 17050 21055 24578 17415 16902 25664 TRUE FALSE 28426.5871 19577.9843 21743.52978 22237.47534 16380.53133 21856.26278 21350.87908 19691.20029 18372.10541 24826.58578 1.145005896 0.788589477 0.875816351 0.895712183 0.659797987 0.880357169 0.860000616 0.79314975 0.740017398 1 14.59959825 -4.757295036 24.99895335 0.826411141 1.145006361 0.524942849 0.088980711 93.80687328 565773.8865 0.02113087 0.159236604 1.75E-05 4.757295036 0.31859522 DIVLVAYS(ph)ALGSQR ddPTM_A459_MK2206_30min_R2 2 DIVLVAYSALGSQR 14 0 A0A0A0MSS8;P42330;S4R3Z2;P42330-2 A0A0A0MSS8;P42330-2 AKR1C3 Aldo-keto reductase family 1 member C3 1 DIVLVAYS(1)ALGSQR;DIVLVAYS(0.999)ALGS(0.001)QR 126.07 0.0013281 8403000 81649 87478 80926 97879 73131 82422 102190 73291 71607 82176 TRUE FALSE 87900.11022 83133.96972 83624.03245 89881.9726 70259.50949 85558.62697 88772.33025 82870.38535 77835.24742 79494.60385 1.105736817 1.045781295 1.051946024 1.130667596 0.883827406 1.076282198 1.116708883 1.042465543 0.979126175 1 16.27856931 -1.522878745 0.146040537 0.999564872 1.29217122 0.108243168 0.066449086 208.442887 2.015683516 0.262955036 12.83922258 0.03 1.522878745 0.292606348 DIVLVAYSALGSHR ddPTM_A459_MK2206_30min_R1 1 DIVLVAYSALGSHR 14 0 P52895;B4DK69;H0Y804;Q04828 P52895;Q04828 AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 125.47 0.0019346 3116800 3251.9 2078 3047.4 2331.3 3540.1 2873.3 3695.2 3292.5 2457.8 3330.5 FALSE TRUE 2975.308829 1942.721822 2840.550979 2510.85713 3399.090321 3035.983763 3448.69995 3263.71402 2713.297105 3743.107484 0.794876674 0.519013101 0.758875077 0.670794825 0.908093165 0.81108645 0.921346759 0.871926343 0.724878224 1 11.87002076 -6.254961553 24.61819509 0.86581762 0.679183359 0.477705955 0.095515939 364.1587868 1383939.918 0.027032527 0.034048453 5.56E-07 6.254961553 -0.186634262 DIYLS(ph)PDR ddPTM_A459_MK2206_30min_R2 1 DIYLSPDR 8 0 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 DIY(0.001)LS(0.999)PDR 117.71 0.0087284 26895000 38832 41506 34306 40040 33602 28627 34309 31275 29122 39767 TRUE FALSE 41805.00778 39444.8724 35449.74492 36768.60392 32282.61664 29716.42054 29804.18709 35362.74988 31654.97892 38469.40605 1.086707908 1.025356938 0.921504867 0.955788189 0.839176373 0.77246892 0.774750383 0.919243459 0.82286113 1 15.23142393 -5.320879661 1.012660302 0.846274692 1.11376669 0.556348037 0.068164852 0.670297699 0.968876847 0.024279618 0.1612745 4.78E-06 5.320879661 0.267491998 DKADFCIIHYAGK ddPTM_A459_MK2206_30min_R1 1 DKADFCIIHYAGK 13 1 P35579;P35579-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35579-2;P35580 MYH9;MYH10 Myosin-9;Myosin-10 0 82.362 0.026439 5782600 9147.5 9824.7 9771.6 9044.7 9225.1 8730 9214.4 9248.8 8576.8 8291.8 FALSE TRUE 8369.45709 9185.110244 9108.331017 9741.324361 8857.644733 9224.285056 8599.724189 9167.938717 9468.389052 9319.050784 0.898101887 0.985627234 0.97738828 1.045312939 0.95048787 0.989830968 0.922811173 0.983784607 1.016025051 1 13.1859673 -4.760720906 24.9607005 0.983856887 0.898101786 0.407579474 0.031611675 18.19393501 631640.2256 0.007894801 0.046038319 1.73E-05 4.760720906 -0.0857551 DKAIT(ph)PPLPESTVPFSNGVLK ddPTM_A459_MK2206_30min_R1 2 DKAITPPLPESTVPFSNGVLK 21 1 Q92667-2;Q92667;I3NI36 Q92667-2 AKAP1 "A-kinase anchor protein 1, mitochondrial" 1 DKAIT(0.998)PPLPES(0.001)T(0.001)VPFSNGVLK;DKAIT(0.759)PPLPES(0.121)T(0.121)VPFSNGVLK 85.423 0.0015277 65861000 5703.6 5916.4 5153 5102.1 6343.3 5402.2 6214.6 5916.8 5617 4968.8 TRUE FALSE 5218.478869 5531.241285 4803.228717 5495.064626 6090.632929 5708.067896 5800.035373 5865.070041 6200.907251 5584.372457 0.934479014 0.99048574 0.860119692 0.984007544 1.090656645 1.022150285 1.038619007 1.050264839 1.110403595 1 12.44717945 -6.019499864 7.116802513 1.051266546 0.932352147 0.643079207 0.041590144 0.104456875 25.06110031 0.011793189 0.016030678 9.56E-07 6.019499864 -0.118914399 DKAIT(ph)PPLPESTVPFSNGVLK ddPTM_A459_MK2206_30min_R2 1 DKAITPPLPESTVPFSNGVLK 21 1 Q92667-2;Q92667;I3NI36 Q92667-2 AKAP1 "A-kinase anchor protein 1, mitochondrial" 1 DKAIT(0.999)PPLPES(0.001)T(0.001)VPFSNGVLK 98.377 0.00045881 17876000 91495 87079 85944 95967 92489 82622 111030 72100 94710 94918 TRUE FALSE 98499.92755 82754.78348 88809.33006 88126.18912 88857.41714 85766.23811 96451.62763 81523.71756 102947.7046 91820.83343 1.072740508 0.901263694 0.967202396 0.959762462 0.967726101 0.934060767 1.050432936 0.887856432 1.121180246 1 16.48653391 -8.268321351 24.99736056 1.060590113 0.966786141 0.270830663 0.060999899 720.1231636 2615667.513 0.049398097 0.01386711 5.39E-09 8.268321351 -0.093803972 DKAPVQPQQS(ph)PAAAPGGTDEKPSGK ddPTM_A459_MK2206_30min_R1 2 DKAPVQPQQSPAAAPGGTDEKPSGK 25 2 Q13200;C9JPC0;F8WBS8 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK 118.21 3.04E-08 96001000 17160.4 18382.6 18947.3 16526.3 15526.8 14475.3 16949.2 16286.9 16434.9 15439.6 TRUE FALSE 15700.81787 17185.8894 17661.21007 17799.15849 14908.33468 15294.87898 15818.54979 16144.50535 18143.36667 17352.37421 0.904822457 0.990405647 1.017797902 1.025747732 0.859152442 0.881428604 0.91160723 0.930391724 1.045584106 1 14.08284545 -8.256444847 24.8426507 1.022792056 0.941673357 0.272540931 0.053949613 535.8460411 2665319.647 0.043878152 0.015412233 5.54E-09 8.256444847 -0.081118698 DKAPVQPQQS(ph)PAAAPGGTDEKPSGK ddPTM_A459_MK2206_30min_R2 5 DKAPVQPQQSPAAAPGGTDEKPSGK 25 2 Q13200;C9JPC0;F8WBS8 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK 96.341 2.74E-06 286945300 806107 841234 872111 844119 839799 617547 1000840 701153 695701 925638 TRUE FALSE 867823.1717 799459.5428 901186.7455 775151.7775 806824.2716 641048.1838 869428.5058 792796.1045 756211.8154 895434.5079 0.969164315 0.892817438 1.006423962 0.865671102 0.901042192 0.715907393 0.970957114 0.885375868 0.844519402 1 19.77222839 -5.787077712 24.96551003 0.875987554 0.949803489 0.153330583 0.076592852 379.7434104 369776.4945 0.020939287 0.031070295 1.63E-06 5.787077712 0.073815935 DKAS(ph)PEPEKDFSEK ddPTM_A459_MK2206_30min_R2 2 DKASPEPEKDFSEK 14 2 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;A0A087WYS3;Q9ULU4-8;Q9ULU4-17;Q9ULU4-2;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 DKAS(1)PEPEKDFSEK;DKAS(1)PEPEKDFSEK 87.157 0.025338 64689000 100192 88153 89485 84347 72825 44866 98221 78466 59638 87036 TRUE FALSE 107862.7766 83775.45021 92468.38524 77455.58029 69965.52458 46573.40707 85324.46472 88721.77561 64825.20544 84196.02245 1.281091118 0.995004844 1.09825123 0.919943461 0.830983728 0.553154481 1.01340256 1.053752577 0.769931923 1 16.36146446 -4.733976157 0.889105052 0.871640248 1.48011366 0.395654655 0.146651015 2.694439843 1.567328295 0.054942736 1.636880492 1.85E-05 4.733976157 0.608473411 DKDDDGGEDDDANCNLICGDEYGPETR ddPTM_A459_MK2206_30min_R1 3 DKDDDGGEDDDANCNLICGDEYGPETR 27 1 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ;; 136.22 1.21E-11 69467400 9038.1 9666.2 10272.2 9279.8 7198.3 6240.63 8164.8 8474.1 8893.5 9120.6 FALSE TRUE 8269.362134 9036.928623 9574.951684 9994.531804 6911.576468 6593.969078 7620.14109 8400.011837 9818.011151 10250.52879 0.806725419 0.881606092 0.934093439 0.975025973 0.674265359 0.64328087 0.743390048 0.819471074 0.957805334 1 13.32341071 -6.249678939 24.97701112 0.786038999 0.900575159 0.125824381 0.112661822 1349.150927 2865347.011 0.034808423 0.044568671 5.63E-07 6.249678939 0.11453616 DKDDDGGEDDDANCNLICGDEYGPETR ddPTM_A459_MK2206_30min_R2 4 DKDDDGGEDDDANCNLICGDEYGPETR 27 1 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ;;; 148.17 2.52E-13 106898100 242720 267792 273083 217483 247344 171508 326388 218609 184734 288078 FALSE TRUE 261302.8298 254493.8387 282187.4509 199713.9432 237632.0318 178034.8571 283532.8635 247181.9469 200801.8294 278678.0385 0.937651317 0.913218136 1.012593072 0.716647585 0.852711728 0.638854996 1.01742091 0.88698036 0.720551323 1 18.08823979 -5.746190551 24.99910626 0.828977844 0.950360559 0.185472024 0.116026752 411.1292584 674004.6624 0.030916605 0.053294626 1.79E-06 5.746190551 0.121382715 DKDDQEWESPS(ph)PPKPTVFISGVIAR ddPTM_A459_MK2206_30min_R1 4 DKDDQEWESPSPPKPTVFISGVIAR 25 2 P51397 P51397 DAP Death-associated protein 1 1 DKDDQEWES(0.01)PS(0.962)PPKPT(0.023)VFIS(0.004)GVIAR;DKDDQEWES(0.003)PS(0.996)PPKPT(0.001)VFISGVIAR;DKDDQEWES(0.009)PS(0.976)PPKPT(0.011)VFIS(0.004)GVIAR;DKDDQEWESPS(0.999)PPKPT(0.001)VFISGVIAR 131.97 6.29E-08 241718100 9906 11791.1 12364.6 10655.7 6852.35 6731.7 7917.6 8980.08 10147.2 10557.4 TRUE FALSE 9063.442682 11023.49725 11525.3254 11476.40386 6579.406389 7112.843037 7389.43135 8901.568107 11202.03775 11865.33042 0.763859274 0.929051013 0.971344665 0.967221599 0.554506799 0.599464388 0.622775017 0.750216622 0.944098256 1 13.53446466 -6.238640148 24.82161739 0.719281946 0.913916107 0.220354424 0.144916631 979.8575619 1066774.862 0.04379265 0.056493723 5.77E-07 6.238640148 0.194634161 DKDDQEWESPS(ph)PPKPTVFISGVIAR ddPTM_A459_MK2206_30min_R2 3 DKDDQEWESPSPPKPTVFISGVIAR 25 2 P51397 P51397 DAP Death-associated protein 1 1 DKDDQEWES(0.006)PS(0.98)PPKPT(0.009)VFIS(0.005)GVIAR;DKDDQEWES(0.092)PS(0.873)PPKPT(0.025)VFIS(0.009)GVIAR;DKDDQEWES(0.094)PS(0.798)PPKPT(0.094)VFIS(0.013)GVIAR 88.04 8.13E-05 35450200 57403.1 59967.5 64273.7 57460.5 52756.3 37209.5 68162.5 50806 44681.8 65622 TRUE FALSE 61797.92547 56989.60115 66416.55308 52765.79334 50684.82258 38625.5336 59212.68187 57446.51864 48568.1422 63480.75951 0.973490644 0.897746051 1.046246982 0.831209232 0.798428106 0.608460483 0.932765807 0.904943783 0.765084453 1 15.95403177 -5.834599792 9.254528732 0.823275656 0.964811895 0.259560492 0.105493313 0.417477415 48.79180225 0.030028186 0.044653929 1.46E-06 5.834599792 0.141536239 DKDQPPS(ph)PSPPPQSEALSSTSR ddPTM_A459_MK2206_30min_R2 1 DKDQPPSPSPPPQSEALSSTSR 22 1 H3BU99;H3BPL8;H3BR21;H3BUX9;Q7L1V2 H3BU99 MON1B Vacuolar fusion protein MON1 homolog B 1 DKDQPPS(0.787)PS(0.213)PPPQSEALSSTSR 84.03 0.00038909 19150000 70838 54335 67000 69233 53816 52559 71275 53446 42269 66842 TRUE FALSE 76261.41175 51636.80291 69233.74656 63576.44243 51702.91344 54559.16957 61916.50688 60431.57571 45945.48122 64660.95101 1.179404425 0.798577845 1.070719584 0.983227766 0.799600263 0.843773077 0.957556391 0.934591508 0.710559936 1 15.98060711 -6.132205888 7.011613316 0.873991003 0.99952083 0.23730612 0.117277537 0.405410758 21.30687618 0.033271845 0.043146824 7.38E-07 6.132205888 0.125529826 DKDQPPSPS(ph)PPPQSEALSSTSR ddPTM_A459_MK2206_30min_R2 1 DKDQPPSPSPPPQSEALSSTSR 22 1 H3BU99;H3BPL8;H3BR21;H3BUX9;Q7L1V2 H3BU99 MON1B Vacuolar fusion protein MON1 homolog B 1 DKDQPPS(0.003)PS(0.997)PPPQSEALSSTSR 56.452 0.012835 26952000 8562 10678 10969 12935 10921 10188 8786.8 11187 6859.1 8596 TRUE FALSE 9217.513303 10147.74605 11334.70099 11878.16912 10492.18667 10575.71148 7633.082605 12649.17931 7455.69212 8315.513224 1.108471967 1.220339115 1.363078944 1.428434879 1.261760565 1.271805022 0.917932832 1.521154374 0.896600356 1 13.02158959 -7.042767316 24.94700897 1.122711014 1.284583866 0.199103728 0.181492016 889.13868 518649.1436 0.067061249 0.051949837 9.06E-08 7.042767316 0.161872852 DKDVTLS(ph)PVK ddPTM_A459_MK2206_30min_R1 2 DKDVTLSPVK 10 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 DKDVT(0.04)LS(0.96)PVK;DKDVT(0.001)LS(0.999)PVK 116.9 0.028142 175480000 12209.5 13966.7 12979.9 11037.7 9157.4 9980.8 12728.8 9991.1 14449.5 13549.4 TRUE FALSE 11171.01791 13057.46529 12098.86055 11887.82557 8792.641367 10545.90427 11879.68498 9903.748866 15951.57723 15228.00196 0.733583955 0.857464119 0.794513987 0.780655637 0.577399542 0.692533682 0.780121056 0.650364302 1.0475161 1 13.89443904 -8.269042994 24.99733782 1.023758106 0.736086561 0.700652419 0.075916805 372.5171315 1224655.831 0.073347657 0.020390964 5.38E-09 8.269042994 -0.287671545 DKDVTLS(ph)PVK ddPTM_A459_MK2206_30min_R2 1 DKDVTLSPVK 10 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 DKDVT(0.003)LS(0.997)PVK 76.156 0.031995 59468000 166420 128070 152660 138750 135530 87711 191620 142330 100600 173030 TRUE FALSE 179161.2432 121710.23 157749.6082 127413.6812 130208.4112 91048.90357 166460.0638 160933.0197 109350.0062 167384.0453 1.070360337 0.727131608 0.942441127 0.761205651 0.777902165 0.543952104 0.994479871 0.961459734 0.653288107 1 17.35280249 -10.42280381 15.14189112 0.999999975 0.823683364 0.09989635 0.156752179 0 0 0.148496892 0.036015786 3.78E-11 10.42280381 -0.176316611 DKEDPQEMPHS(ph)PLGSMPEIR ddPTM_A459_MK2206_30min_R1 2 DKEDPQEMPHSPLGSMPEIR 20 1 Q9HB58-7;G5E9C0;Q9HB58-2;Q9HB58-5;Q9HB58-3;Q9HB58;Q9HB58-6 Q9HB58-7 SP110 Sp110 nuclear body protein 1 DKEDPQEMPHS(0.974)PLGS(0.026)MPEIR;DKEDPQEMPHS(0.987)PLGS(0.013)MPEIR 74.819 0.0034774 10491900 5322.3 5077 5361.63 4057.05 4430.64 4415.78 5229.27 5109.8 4578.79 4780.73 TRUE FALSE 4869.610436 4746.486377 4997.697494 4369.524694 4254.158227 4665.797648 4880.43494 5065.125557 5054.771606 5373.002925 0.906310773 0.883395458 0.930149781 0.813236984 0.791765478 0.868378021 0.908325383 0.9426992 0.940772167 1 12.39151291 -7.773476211 1.484791518 0.973365723 0.864093648 0.5412474 0.040070096 0.372461549 1.528133934 0.036006743 0.013887129 1.68E-08 7.773476211 -0.109272075 DKEDPQEMPHS(ph)PLGSMPEIR ddPTM_A459_MK2206_30min_R2 5 DKEDPQEMPHSPLGSMPEIR 20 1 Q9HB58-7;G5E9C0;Q9HB58-2;Q9HB58-5;Q9HB58-3;Q9HB58;Q9HB58-6 Q9HB58-7 SP110 Sp110 nuclear body protein 1 DKEDPQEMPHS(0.948)PLGS(0.052)MPEIR;DKEDPQEMPHS(0.985)PLGS(0.015)MPEIR;DKEDPQEMPHS(0.996)PLGS(0.004)MPEIR;DKEDPQEMPHS(0.957)PLGS(0.043)MPEIR;DKEDPQEMPHS(0.845)PLGS(0.155)MPEIR 100.08 0.00042916 31627000 159434 187586 162411 185347 187617 160156 209246 144683 148231 180497 TRUE FALSE 171640.3896 178270.752 167825.7017 170203.5572 180250.2139 166250.8488 181771.7489 163593.5649 161123.8644 174607.3977 0.983007547 1.020980522 0.961160317 0.974778615 1.032317166 0.952140923 1.041031201 0.936922301 0.922777996 1 17.41375516 -7.799024042 24.99999966 0.947387554 0.993754924 0.240892032 0.033490741 214.4611589 142649.2588 0.017161322 0.00824431 1.59E-08 7.799024042 0.04636737 DKENGNNS(ph)PLPK ddPTM_A459_MK2206_30min_R1 2 DKENGNNSPLPK 12 1 Q6P1L5 Q6P1L5 FAM117B Protein FAM117B 1 DKENGNNS(1)PLPK;DKENGNNS(1)PLPK 122.66 0.016553 24775900 5264.5 6589.1 6523.4 5567.8 4821 4299.1 5172.2 6195.4 5946.2 5536.4 TRUE FALSE 4816.72663 6160.148392 6080.609783 5996.632921 4628.969361 4542.511327 4827.171975 6141.234271 6564.328769 6222.29103 0.774108219 0.990012901 0.977230051 0.963733919 0.743933278 0.73003839 0.775786917 0.986973165 1.054969743 1 12.60323016 -7.910797178 6.236638292 1.02535914 0.856929786 0.393102311 0.093558714 0.245710806 13.78528764 0.059556627 0.028129296 1.23E-08 7.910797178 -0.168429354 DKENGNNS(ph)PLPK ddPTM_A459_MK2206_30min_R2 2 DKENGNNSPLPK 12 1 Q6P1L5 Q6P1L5 FAM117B Protein FAM117B 1 DKENGNNS(1)PLPK;DKENGNNS(1)PLPK 127.71 0.012122 14551100 34965.1 35192 38326.3 33838.3 33104.4 23182.3 38596.4 29536.5 27713.3 37112.6 TRUE FALSE 37642.05494 33444.41645 39604.07971 31073.60265 31804.55492 24064.51867 33528.64632 33397.02196 30123.75274 35901.6189 1.048477926 0.931557336 1.103127963 0.865520932 0.885880801 0.670290628 0.933903466 0.930237215 0.83906391 1 15.13176128 -5.783478486 24.62541952 0.866458398 1.018104678 0.371062193 0.090389292 202.3091974 226049.661 0.025369455 0.037666424 1.65E-06 5.783478486 0.15164628 DKEVS(ph)DDEAEEK ddPTM_A459_MK2206_30min_R1 6 DKEVSDDEAEEK 12 1 P07900;P07900-2;G3V2J8 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK 161.24 0.0022798 208259000 20767.39 28413.8 27595.68 18410 11272.52 10828.6 18955.25 16593.76 32157.38 45954.7 TRUE FALSE 19001.01443 26564.05646 25722.56213 19827.94139 10823.51166 11441.70597 17690.77986 16448.68251 35500.25473 51647.91518 0.36789509 0.514329695 0.498036795 0.383905939 0.20956338 0.221532775 0.342526505 0.318477182 0.687351166 1 15.65642249 -8.503292718 2.857727241 0.997828909 0.357906876 0.825794173 0.09472374 0.108478567 2.087661627 0.106107209 0.02846624 3.14E-09 8.503292718 -0.639922032 down DKEVS(ph)DDEAEEK ddPTM_A459_MK2206_30min_R2 4 DKEVSDDEAEEK 12 1 P07900;P07900-2;G3V2J8 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK 123.76 0.015279 446666000 563431 296310 388593 299998 256079 204074 406660 313190 213621 464882 TRUE FALSE 606567.7106 281595.6763 401548.4967 275487.2038 246024.0518 211840.1791 353265.0535 354125.0083 232201.3684 449712.9384 1.348788658 0.626167611 0.892899586 0.612584563 0.547069098 0.471056447 0.785534556 0.787446787 0.516332417 1 18.77864487 -4.758540654 24.9943693 0.681683229 1.348789561 0.592131995 0.162969665 54.53225821 470120.3552 0.039737005 0.270024112 1.74E-05 4.758540654 0.667106332 DKEVS(ph)DDEAEEKEDK ddPTM_A459_MK2206_30min_R1 1 DKEVSDDEAEEKEDK 15 2 P07900;P07900-2;G3V2J8 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 DKEVS(1)DDEAEEKEDK 77.554 0.039176 26297000 1591.7 2450.6 2317.5 1523.9 1164.4 1205.3 1961.7 1902.1 2730.2 4230.9 TRUE FALSE 1456.317557 2291.065495 2160.194557 1641.271042 1118.019482 1273.543044 1830.838572 1885.47014 3014.01406 4755.055834 0.306267183 0.481816739 0.454294257 0.345163359 0.235122262 0.267829251 0.385029879 0.396519033 0.63385461 1 12.21524657 -8.577982446 1.70906495 0.999229513 0.353488593 0.887212606 0.07166979 0.147488393 0.954670536 0.077528664 0.022196046 2.64E-09 8.577982446 -0.64574092 down DKEVS(ph)DDEAEEKEDK ddPTM_A459_MK2206_30min_R2 2 DKEVSDDEAEEKEDK 15 2 P07900;P07900-2;G3V2J8 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK 91.889 0.015904 75914000 150171 62502 89862 53402 45466 30929 92559 59335 33090 113782 TRUE FALSE 161668.2072 59398.24157 92857.95423 49038.88578 43680.77639 32106.02477 80405.89212 67090.28823 35968.10839 110069.3027 1.468785604 0.539644025 0.843631712 0.44552736 0.396847943 0.291689181 0.730502421 0.609527694 0.326776926 1 16.74805264 -2.923353638 1.45753695 0.541229695 199.9924351 0.579206012 0.223501979 206.4200919 2.66991857 0.06069951 135661.9287 0.001193016 2.923353638 199.4512055 DKFS(ph)PFPVQDRPESSLVFK ddPTM_A459_MK2206_30min_R1 1 DKFSPFPVQDRPESSLVFK 19 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DKFS(1)PFPVQDRPESSLVFK 46.249 0.044188 95718000 5704.1 6502.4 6752.6 5544.5 5802.9 4840.6 5692.6 5649.1 5666.6 5836.3 TRUE FALSE 5218.936342 6079.092578 6294.252326 5971.538351 5571.758205 5114.670589 5312.857041 5599.710514 6255.663348 6559.344906 0.795649019 0.926783492 0.95958551 0.910386393 0.849438211 0.779753262 0.809967629 0.85369966 0.953702456 1 12.67933602 -8.413213496 3.46600965 0.998136163 0.863127433 0.425450381 0.055089206 0.250593566 5.374160781 0.059861279 0.015905785 3.86E-09 8.413213496 -0.13500873 DKKS(ph)PLIESTANMDNNQSQK ddPTM_A459_MK2206_30min_R2 3 DKKSPLIESTANMDNNQSQK 20 2 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 DKKS(0.999)PLIES(0.001)TANMDNNQSQK;DKKS(0.963)PLIES(0.019)T(0.019)ANMDNNQSQK;DKKS(0.767)PLIES(0.116)T(0.116)ANMDNNQS(0.001)QK 85.177 0.0027739 67820000 76503.8 93604 79671.6 69686.8 96669 62093.6 112720 82047 78205 105894 TRUE FALSE 82360.98975 88955.76147 82327.81138 63993.16552 92873.28934 64456.61546 97919.7286 92770.82461 85007.12954 102438.6875 0.804002783 0.868380528 0.803678897 0.624697242 0.906623187 0.629221411 0.955886209 0.905622933 0.829834232 1 16.64440115 -7.298282596 24.99884336 0.914971108 0.777872292 0.378953778 0.093763884 685.453835 465091.216 0.03807532 0.025671143 5.03E-08 7.298282596 -0.137098816 DKLCS(ph)PLSEPGDPSK ddPTM_A459_MK2206_30min_R1 2 DKLCSPLSEPGDPSK 15 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 DKLCS(0.996)PLS(0.004)EPGDPSK;DKLCS(0.997)PLS(0.003)EPGDPSK 122.1 0.00087904 11158800 10426.5 11061.1 11111.6 9908.1 8718.1 7559.9 7421.9 9623.5 9754.1 9444.2 TRUE FALSE 9539.671423 10341.02038 10357.37555 10671.22358 8370.839616 7987.935005 6926.798593 9539.362754 10768.0736 10614.2188 0.898763405 0.974261091 0.975801964 1.005370606 0.788643967 0.752569281 0.652596176 0.898734324 1.01449516 1 13.37371057 -6.260809991 24.995094 0.831250824 0.965189591 0.198449737 0.106185818 84.4451469 3353604.566 0.033976138 0.04122292 5.49E-07 6.260809991 0.133938767 DKLCS(ph)PLSEPGDPSK ddPTM_A459_MK2206_30min_R2 3 DKLCSPLSEPGDPSK 15 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 DKLCS(1)PLSEPGDPSK;DKLCS(1)PLSEPGDPSK;DKLCS(0.972)PLS(0.028)EPGDPSK 109.13 0.0021024 20508700 169561 183908 174774 157572 170745 121761 197867 144602 128153 180936 TRUE FALSE 182542.7205 174775.3961 180600.8779 144697.8636 164040.6934 126394.7002 171886.8252 163501.9779 139299.5163 175032.0731 1.042910121 0.998533543 1.031815911 0.826693422 0.937203625 0.722123082 0.982030448 0.934125815 0.795851376 1 17.41725978 -5.749716885 24.96525412 0.882065262 1.021831279 0.377188012 0.081743114 223.9870639 477018.2161 0.021420239 0.036711472 1.78E-06 5.749716885 0.139766017 DKLCSPLS(ph)EPGDPSK ddPTM_A459_MK2206_30min_R1 1 DKLCSPLSEPGDPSK 15 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 DKLCS(0.419)PLS(0.58)EPGDPSK 166.04 3.10E-05 0 879.03 767.18 585.2 726.63 796.73 542.64 539.67 606.23 759.7 650.16 TRUE FALSE 804.2638825 717.2364426 545.4782545 782.5951685 764.994557 573.3638079 503.669599 600.929795 838.6735336 730.7067293 1.100665767 0.981565399 0.746507775 1.071011306 1.046924199 0.784670217 0.689291037 0.822395321 1.147756685 1 9.513148683 -6.757297947 24.99954995 0.865251635 0.979950429 0.091390907 0.148022385 247.7066219 1495267.846 0.051905187 0.050136914 1.75E-07 6.757297947 0.114698794 DKLESEMEDAYHEHQANLLR ddPTM_A459_MK2206_30min_R1 1 DKLESEMEDAYHEHQANLLR 20 1 P23246;P23246-2;H0Y9K7 P23246 SFPQ "Splicing factor, proline- and glutamine-rich" 0 97.352 0.00039178 5910000 3032.5 2649.2 3242.8 2949.2 3095.2 2499.7 2666.6 3404.7 2886.5 2610.7 FALSE TRUE 2774.569951 2476.736598 3022.687771 3176.347895 2971.91163 2641.230854 2488.715979 3374.933067 3186.562004 2934.133226 0.945618258 0.844111841 1.030180819 1.082550672 1.01287549 0.90017414 0.848194607 1.150231706 1.086031805 1 11.51871866 -7.774142876 24.99996332 1.088598812 0.9561927 0.343313597 0.079864965 284.3152183 559512.2609 0.046920068 0.022774676 1.68E-08 7.774142876 -0.132406112 DKLNNLVLFDK ddPTM_A459_MK2206_30min_R1 2 DKLNNLVLFDK 11 1 P62851 P62851 RPS25 40S ribosomal protein S25 0 ; 144.28 0.0021694 15526200 11631.7 12530.4 12530.7 11977.9 12484.5 11055.7 11928.6 12138.2 9918.2 9856.5 FALSE TRUE 10642.36283 11714.66868 11680.151 12900.43993 11987.21593 11681.66418 11132.86486 12032.077 10949.23238 11077.59763 0.960710362 1.057509856 1.054393866 1.164552131 1.082113318 1.054530465 1.004989099 1.086163029 0.988412176 1 13.43535742 -7.043608676 6.75107334 1.02724929 1.068591531 0.128324163 0.052509636 0.538531438 65.95556689 0.020785255 0.01633796 9.04E-08 7.043608676 0.04134224 DKLNNLVLFDK ddPTM_A459_MK2206_30min_R2 1 DKLNNLVLFDK 11 1 P62851 P62851 RPS25 40S ribosomal protein S25 0 112.5 0.021522 1294300 26480 28308 27314 33527 29158 27416 32624 24805 25204 34394 FALSE TRUE 28507.32916 26902.26588 28224.63513 30787.73685 28013.11041 28459.33509 28340.42961 28047.09867 27396.19836 33271.7266 0.856803421 0.808562363 0.848306896 0.925342325 0.841949405 0.855360933 0.851787163 0.842970941 0.823407775 1 15.02200911 -10.6855142 3.79460623 1.000098538 0.851110403 0.707942954 0.028804721 43061296.17 60999246.01 48833.81462 0.007506226 2.06E-11 10.6855142 -0.148988135 DKMEGS(ph)DFESSGGR ddPTM_A459_MK2206_30min_R1 1 DKMEGSDFESSGGR 14 1 E9PEN0;A0A1B0GW41;Q8WYH8-2;Q8WYH8 E9PEN0 ING5 Inhibitor of growth protein 5 1 DKMEGS(0.994)DFES(0.006)SGGR 150.39 0.0020027 9489400 1661.2 1724.8 1790.7 1434.1 1310.8 1064.1 1660.2 1368.2 1402.5 1420.9 TRUE FALSE 1519.906217 1612.515207 1669.152273 1544.55463 1258.58806 1124.348422 1549.451087 1356.237972 1548.294894 1596.931819 0.951766505 1.00975833 1.045224507 0.967201362 0.788128864 0.704067894 0.970267527 0.849277317 0.969543518 1 10.641087 -6.063088897 7.006685724 0.868709704 1.003644915 0.288599154 0.087275031 0.29935708 28.47786711 0.02632781 0.034353963 8.65E-07 6.063088897 0.134935212 DKPTYDEIFYTLS(ph)PVNGK ddPTM_A459_MK2206_30min_R1 2 DKPTYDEIFYTLSPVNGK 18 1 A0A024R571;Q9H4M9 A0A024R571 EHD1 EH domain-containing protein 1 1 DKPTYDEIFYTLS(1)PVNGK;DKPTYDEIFYTLS(1)PVNGK 139.43 0.00017954 317740000 33697 35787 36011 31248 31704 29359 32155 31731 29548 27813 TRUE FALSE 30830.8932 33457.2598 33566.67365 33654.72637 30441.16255 31021.28121 30009.99862 31453.57921 32619.62034 31258.68442 0.986314484 1.070334866 1.073835137 1.076652041 0.973846568 0.992405208 0.960053156 1.006234901 1.04353785 1 14.93196944 -6.262284859 24.99997552 0.994346315 1.054684257 0.42670766 0.031562393 73.01577426 2159028.718 0.0098898 0.011886162 5.47E-07 6.262284859 0.060337942 DKPTYDEIFYTLS(ph)PVNGK ddPTM_A459_MK2206_30min_R2 3 DKPTYDEIFYTLSPVNGK 18 1 A0A024R571;Q9H4M9 A0A024R571 EHD1 EH domain-containing protein 1 1 DKPTYDEIFYTLS(1)PVNGK;DKPTYDEIFY(0.009)T(0.163)LS(0.828)PVNGK;DKPTYDEIFYTLS(1)PVNGK 141.79 0.00016873 87865200 400323 390212 414407 429614 435997 338257 482213 362176 351941 438813 TRUE FALSE 430972.0367 370834.6395 428223.1225 394513.1619 418877.5671 351129.6072 418897.8539 409513.6467 382552.192 424494.5677 1.01525925 0.873591013 1.008783516 0.929371521 0.986767791 0.827171026 0.986815582 0.964708804 0.901194552 1 18.69538657 -10.69406599 3.999160116 1.00002472 0.942888189 0.07709131 0.058330575 77791526.11 1.041088371 19827.42213 0.013144833 2.02E-11 10.69406599 -0.057136531 DKPVYDELFYTLS(ph)PINGK ddPTM_A459_MK2206_30min_R1 2 DKPVYDELFYTLSPINGK 18 1 Q9H223 Q9H223 EHD4 EH domain-containing protein 4 1 DKPVYDELFYT(0.024)LS(0.976)PINGK;DKPVYDELFYT(0.001)LS(0.998)PINGK 111.99 0.00069719 43336000 26895 26732 27933 23694 24894 23159 26570 26379 25023 24553 TRUE FALSE 24607.43902 24991.74194 26036.98579 25518.91599 23902.41927 24470.24257 24797.56378 26148.37118 27624.2304 27594.81101 0.891741531 0.905668168 0.943546444 0.924772269 0.866192534 0.88676971 0.898631405 0.947582905 1.00106612 1 14.75210938 -8.046877079 2.61042895 1.00139745 0.903030889 0.794151372 0.019949928 0.143315744 1.8149775 0.018249318 0.006135387 8.98E-09 8.046877079 -0.098366561 DKPVYDELFYTLS(ph)PINGK ddPTM_A459_MK2206_30min_R2 2 DKPVYDELFYTLSPINGK 18 1 Q9H223 Q9H223 EHD4 EH domain-containing protein 4 1 DKPVYDELFY(0.021)T(0.122)LS(0.857)PINGK;DKPVYDELFY(0.001)T(0.12)LS(0.879)PINGK 92.551 0.0027215 8261700 82124 85952 72442 88891 89146 87074 94642 70470 76351 92677 TRUE FALSE 88411.47658 81683.74867 74857.18012 81628.32095 85645.68012 90387.66209 82215.39171 79680.67096 82991.87197 89652.95708 0.986152375 0.911110479 0.834966102 0.910492231 0.955302345 1.008194989 0.91704049 0.888767906 0.925701446 1 16.45206355 -4.753876967 24.27670611 0.924046625 0.986152537 0.110602192 0.04838347 438.5966362 1407801.435 0.012774634 0.128184761 1.76E-05 4.753876967 0.062105912 DKRPLS(ph)GPDVGTPQPAGLASGAK ddPTM_A459_MK2206_30min_R1 3 DKRPLSGPDVGTPQPAGLASGAK 23 2 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 DKRPLS(0.943)GPDVGT(0.057)PQPAGLASGAK;DKRPLS(0.992)GPDVGT(0.008)PQPAGLASGAK;DKRPLS(0.732)GPDVGT(0.268)PQPAGLASGAK 88.433 0.0002392 451431000 13225.7 16716.9 15930.6 15558.9 14893.4 13284.3 12999.7 14048.3 12329.6 10481.2 TRUE FALSE 12100.78476 15628.62677 14849.27526 16757.24917 14300.16434 14036.44559 12132.51373 13925.47719 13611.30604 11779.69019 1.027258321 1.326743448 1.260582836 1.422554321 1.21396778 1.1915802 1.029951853 1.182159885 1.155489306 1 13.52401398 -6.89053711 2.745931969 1.107464889 1.266541854 0.318833839 0.106651741 0.335389722 5.117933593 0.041255467 0.035510387 1.29E-07 6.89053711 0.159076965 DKRPLS(ph)GPDVGTPQPAGLASGAK ddPTM_A459_MK2206_30min_R2 4 DKRPLSGPDVGTPQPAGLASGAK 23 2 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 DKRPLS(0.961)GPDVGT(0.039)PQPAGLASGAK;DKRPLS(0.997)GPDVGT(0.003)PQPAGLASGAK;DKRPLS(0.5)GPDVGT(0.5)PQPAGLASGAK;DKRPLS(0.948)GPDVGT(0.052)PQPAGLASGAK 64.574 0.0053033 372365600 319928 383501 388031 384059 387632 302835 418719 287474 327652 355382 TRUE FALSE 344421.9337 364456.898 400967.7599 352680.1512 372411.62 314359.5981 363740.6923 325047.8388 356150.5787 343785.9144 1.001850044 1.060127488 1.166329809 1.02587144 1.08326608 0.914405114 1.058044199 0.945494929 1.035966175 1 18.39115091 -6.721718557 24.99998275 0.991579239 1.070259135 0.323388666 0.055398384 182.4725819 114846.3566 0.017709492 0.017709241 1.90E-07 6.721718557 0.078679896 DKS(ph)DSDTEGLLFSR ddPTM_A459_MK2206_30min_R1 4 DKSDSDTEGLLFSR 14 1 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 DKS(0.958)DS(0.041)DT(0.001)EGLLFSR;DKS(0.559)DS(0.267)DT(0.174)EGLLFSR;DKS(0.577)DS(0.377)DT(0.046)EGLLFSR;DKS(0.863)DS(0.135)DT(0.002)EGLLFSR 128.82 0.00066626 52321000 9359.7 11293.8 10344.4 8749.09 7794.51 7730.67 10799.7 9143.4 13276.8 16147.7 TRUE FALSE 8563.608365 10558.57157 9642.250949 9422.946428 7484.038162 8168.373855 10079.27172 9063.460218 14656.97087 18148.19898 0.471870976 0.581797212 0.531306217 0.519222124 0.412384621 0.450092809 0.555386886 0.499413756 0.807626745 1 14.14753876 -8.432741831 2.530447168 0.998656218 0.501382692 0.921701919 0.048300835 0.069009904 0.917020302 0.049455684 0.013523712 3.69E-09 8.432741831 -0.497273526 DKS(ph)DSDTEGLLFSR ddPTM_A459_MK2206_30min_R2 6 DKSDSDTEGLLFSR 14 1 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 DKS(0.551)DS(0.406)DT(0.041)EGLLFS(0.002)R;DKS(0.955)DS(0.038)DT(0.007)EGLLFSR;DKS(0.597)DS(0.377)DT(0.022)EGLLFS(0.003)R;DKS(0.992)DS(0.008)DTEGLLFSR;DKS(0.75)DS(0.247)DT(0.003)EGLLFSR;DKS(0.929)DS(0.047)DT(0.024)EGLLFSR 128.82 0.0052372 52014800 117318 98973.8 113022 102889 93256.6 82078.1 118664 97682.3 90735.2 108273.5 TRUE FALSE 126299.9563 94058.90501 116790.0971 94482.63957 89594.87731 85201.63961 103083.2743 110449.712 98627.18368 104740.5446 1.205836353 0.898018102 1.115041912 0.902063666 0.855398238 0.813454236 0.984177376 1.054507712 0.941633291 1 16.67646049 DKS(ph)FDDEESVDGNRPSSAASAFK ddPTM_A459_MK2206_30min_R2 2 DKSFDDEESVDGNRPSSAASAFK 23 2 E7ERI8;E7EW49;O75122-3 E7ERI8 CLASP2 CLIP-associating protein 2 1 DKS(0.999)FDDEES(0.001)VDGNRPSSAASAFK;DKS(0.999)FDDEES(0.001)VDGNRPSSAASAFK 50.098 0.018247 19510700 38337 35208 33606 30853 38776 25677 38762 27538 30770 31801 TRUE FALSE 41272.1102 33459.62192 34726.40727 28332.21121 37253.45941 26654.15623 33672.50284 31137.31115 33446.31898 30763.33597 1.341600606 1.087646084 1.128824497 0.920973305 1.210969429 0.866426068 1.09456604 1.012156522 1.087213656 1 14.90892434 DKS(ph)PSSLLEDAK ddPTM_A459_MK2206_30min_R1 3 DKSPSSLLEDAK 12 1 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 DKS(0.971)PS(0.021)S(0.007)LLEDAK;DKS(0.963)PS(0.025)S(0.012)LLEDAK;DKS(0.988)PS(0.006)S(0.006)LLEDAK 129.38 0.011002 51827700 8980.5 11065.1 10831.9 9720 7128.9 6658 8313.3 9485.5 9999.4 9482.2 TRUE FALSE 8216.661317 10344.75998 10096.66081 10468.63608 6844.940817 7034.970206 7758.734925 9402.569274 11038.87341 10656.92652 0.771016043 0.970707639 0.947427083 0.982331638 0.64229971 0.660131248 0.728046206 0.882296528 1.035840248 1 13.3795038 -10.66199271 7.190926306 1.000000101 0.843339091 0.106072856 0.13321238 2.37E-07 2.83E-08 0.141768919 0.034383991 2.18E-11 10.66199271 -0.15666101 DKS(ph)PVREPIDNLTPEER ddPTM_A459_MK2206_30min_R1 3 DKSPVREPIDNLTPEER 17 2 G3XAC6;Q14498-2;Q14498;Q5QP23;H0Y4X3;Q14498-3;Q5QP22 G3XAC6 RBM39 RNA-binding protein 39 1 DKS(0.937)PVREPIDNLT(0.063)PEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER 173.51 1.27E-05 75908000 5258.22 5659.22 5919.27 4873.79 4402.59 4096.6 4711.77 4964.48 5142.83 5254.5 TRUE FALSE 4810.980777 5290.803749 5517.486444 5249.17015 4227.225518 4328.545952 4397.45642 4921.076075 5677.445582 5905.467129 0.814665575 0.895916213 0.93430144 0.888866204 0.715815604 0.73297266 0.744641588 0.83330852 0.961388059 1 12.52783547 -8.304854357 3.5673782 0.994883179 0.818939988 0.468078597 0.069156979 0.242916689 6.046898596 0.074865591 0.020754364 4.96E-09 8.304854357 -0.175943192 DKS(ph)PVREPIDNLTPEER ddPTM_A459_MK2206_30min_R2 4 DKSPVREPIDNLTPEER 17 2 G3XAC6;Q14498-2;Q14498;Q5QP23;H0Y4X3;Q14498-3;Q5QP22 G3XAC6 RBM39 RNA-binding protein 39 1 DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER 61.186 0.022375 1355541000 170261 182697 194398 176015 180751 131353 191801 173095 165236 209068 TRUE FALSE 183296.3131 173624.5326 200879.1323 161634.0115 173653.8075 136351.7305 166617.2983 195719.1108 179607.9286 202246.1283 0.906303199 0.858481367 0.993240929 0.799194589 0.858626116 0.674187099 0.823834304 0.967727355 0.888066091 1 17.62575256 -7.760641367 24.99995708 0.945922558 0.843282029 0.270582771 0.080366667 32.30887745 1012281.693 0.042959251 0.022917248 1.74E-08 7.760641367 -0.102640528 DKTESVTSGPMS(ph)PEGSPSKSPSK ddPTM_A459_MK2206_30min_R1 1 DKTESVTSGPMSPEGSPSKSPSK 23 2 P35612 P35612 ADD2 Beta-adducin 1 DKTESVTSGPMS(0.997)PEGS(0.002)PSKSPSK 114.02 4.54E-06 16895000 3462.1 4743.6 4948.1 3648.7 3295.6 2991.6 3786.6 3606.3 5087.4 5245.6 TRUE FALSE 3167.630215 4434.790778 4612.236758 3929.723506 3164.329273 3160.981807 3534.002823 3574.770499 5616.253435 5895.46453 0.537299512 0.752237717 0.782336444 0.666567238 0.5367396 0.536171796 0.599444336 0.606359428 0.952639679 1 12.52538978 -8.291980992 5.646995282 0.985977482 0.630525984 0.741619025 0.082466689 0.109391084 10.5135266 0.083690265 0.023299146 5.11E-09 8.291980992 -0.355451498 DKTESVTSGPMSPEGSPS(ph)KSPSK ddPTM_A459_MK2206_30min_R2 1 DKTESVTSGPMSPEGSPSKSPSK 23 2 P35612 P35612 ADD2 Beta-adducin 1 DKTESVTSGPMSPEGS(0.011)PS(0.787)KS(0.151)PS(0.052)K 107.18 7.60E-06 23381000 69471 70222 76837 62579 58359 48256 86703 69471 48151 78310 TRUE FALSE 74789.75317 66734.87759 79398.70723 57466.09552 56067.53243 50092.41589 75318.79195 78551.09823 52339.08694 75754.75111 0.987261552 0.88093323 1.048102014 0.758580745 0.740119024 0.661244545 0.994245124 1.036913158 0.690901708 1 16.20904875 -5.7633919 24.99999429 0.836605619 0.962982356 0.17230422 0.131763678 99.99707785 1280388.27 0.038346278 0.060267155 1.72E-06 5.7633919 0.126376737 DKTESVTSGPMSPEGSPSKS(ph)PSK ddPTM_A459_MK2206_30min_R1 1 DKTESVTSGPMSPEGSPSKSPSK 23 2 P35612 P35612 ADD2 Beta-adducin 1 DKTESVTSGPMSPEGS(0.373)PS(0.06)KS(0.546)PS(0.022)K 142.21 1.98E-06 11314000 674.53 1082 1122.6 921.13 612.43 672.16 727.27 647.62 938.08 1255.3 TRUE FALSE 617.1576814 1011.561603 1046.40104 992.0755922 588.0356163 710.2171183 678.7551453 641.9579266 1035.596773 1410.816041 0.43744731 0.717004609 0.741699137 0.703192736 0.416805309 0.503408735 0.481108185 0.455025962 0.734040968 1 10.46231417 -8.562983487 4.805606848 0.999858882 0.565184049 0.582995734 0.116102106 0.177229044 14.71705295 0.123248308 0.03209006 2.74E-09 8.562983487 -0.434674832 DKTESVTSGPMSPEGSPSKS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 DKTESVTSGPMSPEGSPSKSPSK 23 2 P35612 P35612 ADD2 Beta-adducin 1 DKTESVTS(0.002)GPMS(0.009)PEGS(0.088)PS(0.063)KS(0.419)PS(0.419)K 63.109 0.0025065 26831000 99152 96533 104980 97429 100480 78720 111560 105350 67277 118400 TRUE FALSE 106743.1534 91739.31159 108479.9808 89468.73904 96534.65033 81715.74476 96912.03799 119119.6067 73128.63185 114536.6177 0.93195657 0.800960544 0.947120519 0.781136556 0.842827842 0.713446463 0.84612275 1.040013309 0.63847382 1 16.80544938 -10.13261663 7.532910545 1 0.841111856 0.162079711 0.110295163 0 0 0.101023578 0.024501817 7.37E-11 10.13261663 -0.158888144 DKWLAPDGLIFPDR ddPTM_A459_MK2206_30min_R1 1 DKWLAPDGLIFPDR 14 1 E9PKG1;Q99873-2;Q99873-3;Q99873;E9PNR9;E9PQ98;E9PIX6;H0YDE4 E9PKG1 PRMT1 Protein arginine N-methyltransferase 1 0 101.2 0.023833 9654600 6503 7049.8 6800.5 6228.2 6864.7 6726.2 6971.9 6341.7 5648.2 5189.9 FALSE TRUE 5949.885701 6590.856739 6338.901007 6707.897043 6591.264463 7107.031631 6506.817272 6286.255185 6235.350602 5832.863994 1.020062478 1.129952069 1.086756183 1.150017736 1.13002197 1.218446314 1.115544144 1.077730458 1.069003256 1 12.50998872 -8.407422135 1.404620674 1.00382627 1.124407538 0.375930684 0.047787555 0.431611742 1.809888725 0.046688394 0.014168737 3.91E-09 8.407422135 0.120581268 DLADELALVDVIEDK ddPTM_A459_MK2206_30min_R1 4 DLADELALVDVIEDK 15 0 P00338;P00338-3;P00338-5;P00338-4;P00338-2;F5GYU2;F5GXY2;F5GXH2;F5H5J4;F5H6W8;F5GZQ4 P00338 LDHA L-lactate dehydrogenase A chain 0 ;;; 293.47 2.41E-66 20864300 9027.52 10726.7 8146.9 8555.91 6152.47 8927.43 8605.51 7344.68 7251.85 9211.28 FALSE TRUE 8259.682019 10028.38988 7593.911127 9214.887671 5907.404092 9432.893372 8031.45213 7280.466237 8005.705758 10352.44291 0.797848594 0.968697917 0.733538083 0.890117217 0.570628995 0.911175599 0.7758026 0.703260699 0.773315615 1 13.33768363 -5.274575375 24.80819758 0.783017913 0.883273267 0.073809589 0.119847966 1357.785356 2564268.578 0.029292787 0.061585252 5.31E-06 5.274575375 0.100255354 DLAEDAPWKK ddPTM_A459_MK2206_30min_R2 1 DLAEDAPWKK 10 1 P21333-2;P21333;Q60FE5;A0A087WWY3;F8WE98;Q14315-2;Q14315;O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;O75369-5;O75369-4 P21333-2;Q14315-2;O75369-8 FLNA;FLNC;FLNB Filamin-A;Filamin-C;Filamin-B 0 99.53 0.024888 8501400 63448 92191 71572 83994 86249 76214 88801 73208 84766 80169 FALSE TRUE 68305.62766 87612.929 73958.17476 77131.42152 82862.43089 79114.37718 77141.32203 82776.53696 92138.79346 77553.0921 0.880759565 1.129715484 0.953645725 0.994562814 1.068460698 1.020131822 0.994690475 1.067353148 1.188073757 1 16.24289668 -7.944656319 5.324241628 1.104675748 1.01181724 0.188713714 0.075039241 0.273637431 16.15745899 0.040273957 0.018440786 1.14E-08 7.944656319 -0.092858508 DLAGS(ph)IIGK ddPTM_A459_MK2206_30min_R2 1 DLAGSIIGK 9 0 P61978;P61978-2;P61978-3;S4R359 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 DLAGS(1)IIGK 84.479 0.036442 4084500 111590 105050 80184 107930 98739 78452 126590 103730 72250 89076 TRUE FALSE 120133.4162 99833.36976 82857.29454 99111.77375 94862.01074 81437.54583 109968.5809 117287.8672 78534.1744 86169.45741 1.3941531 1.158570249 0.961562217 1.150196099 1.100877429 0.945085977 1.27618978 1.36113039 0.911392235 1 16.39488898 -4.791090393 4.054475708 1.103031975 1.416288409 0.30040082 0.138383701 0.288252927 8.952618351 0.035100942 0.257515124 1.62E-05 4.791090393 0.313256434 DLAVPAALT(ph)PR ddPTM_A459_MK2206_30min_R1 2 DLAVPAALTPR 11 0 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 1 DLAVPAALT(1)PR;DLAVPAALT(1)PR 128.57 0.0064357 16478100 8494.6 7897.8 4910.8 4650.5 8327.7 8121.2 8295.2 6103.9 8414.7 5891 TRUE FALSE 7772.089663 7383.651785 4577.468578 5008.682316 7995.990075 8581.015326 7741.842343 6050.534246 9289.438177 6620.821555 1.17388599 1.115216854 0.691374709 0.756504653 1.207703607 1.296065036 1.169317475 0.91386457 1.403064272 1 12.69279453 -6.284000492 24.36383116 1.16746462 0.929824137 0.269064471 0.186241702 818.6865874 884099.9738 0.060623721 0.068797506 5.20E-07 6.284000492 -0.237640483 DLAVPAALT(ph)PR ddPTM_A459_MK2206_30min_R2 3 DLAVPAALTPR 11 0 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 1 DLAVPAALT(1)PR;DLAVPAALT(1)PR;DLAVPAALT(1)PR 120.87 0.010769 21060600 146137 66747.6 68893.7 83197.5 53576.8 94921.8 138960 59333.9 68742.5 77926.3 TRUE FALSE 157325.3611 63433.01124 71190.58157 76399.99811 51473.10563 98534.11561 120714.3851 67089.04445 74721.59839 75383.57121 2.086997983 0.841469968 0.944377938 1.013483401 0.682815961 1.307103312 1.601335452 0.889969039 0.991218606 1 16.20196252 -4.754802684 24.99774903 1.039200175 2.086999754 0.630101967 0.242824388 160.8603734 605840.9719 0.064649609 0.609534151 1.76E-05 4.754802684 1.047799578 DLDDFQSWLSR ddPTM_A459_MK2206_30min_R2 2 DLDDFQSWLSR 11 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 0 ; 193.3 0.00026593 13899000 39592 52851 49397 51198 42928 48241 46363 39448 43160 44190 FALSE TRUE 42623.19396 50226.49619 51043.87133 47014.95963 41242.43102 50076.84506 40275.48241 44603.98905 46913.97878 42748.08392 0.997078467 1.174941461 1.194062205 1.099814432 0.964778471 1.171440693 0.942158776 1.043414931 1.097452201 1 15.38357214 -6.0117774 24.5242389 1.039970109 1.130588713 0.201085339 0.078256027 665.7272672 1386258.562 0.022049349 0.030171124 9.73E-07 6.0117774 0.090618604 DLDEDELLGNLS(ph)ETELK ddPTM_A459_MK2206_30min_R1 2 DLDEDELLGNLSETELK 17 0 Q9NYL9;H0YNU8 Q9NYL9 TMOD3 Tropomodulin-3 1 DLDEDELLGNLS(0.5)ET(0.5)ELK;DLDEDELLGNLS(0.5)ET(0.5)ELK 239.93 1.45E-22 7395300 3115.2 3351.4 3940.1 2561.4 2590.7 2016.8 2913.4 2835 3742.9 4176.2 TRUE FALSE 2850.235881 3133.223251 3672.65699 2758.679472 2487.506933 2130.989473 2719.052402 2810.213894 4131.987849 4693.579185 0.607262767 0.667555213 0.782485358 0.587756031 0.529980817 0.454022269 0.579313205 0.598735801 0.880349023 1 12.19647278 -8.376957153 3.088974436 0.995405465 0.599473551 0.74380444 0.080992243 0.13662515 2.385093603 0.088474508 0.023908039 4.20E-09 8.376957153 -0.395931914 DLDEEGS(ph)EK ddPTM_A459_MK2206_30min_R1 2 DLDEEGSEK 9 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 DLDEEGS(1)EK;DLDEEGS(1)EK 141.08 0.0022372 16167800 5111.6 6352.7 6787.2 3299.3 3243.1 3355.3 6890.4 5239.8 8508.2 17984.1 TRUE FALSE 4676.831578 5939.138075 6326.503774 3553.412658 3113.92046 3545.274186 6430.753988 5193.988981 9392.657837 20212.10608 0.231387643 0.293840634 0.313005668 0.175806155 0.154062147 0.175403502 0.318163479 0.25697416 0.464704559 1 14.30293204 -8.803978047 1.304585864 1.000311902 0.231545299 0.947113842 0.054506951 0.217616459 0.64465484 0.057285074 0.01717383 1.57E-09 8.803978047 -0.768766603 DLDEEGS(ph)EK ddPTM_A459_MK2206_30min_R2 3 DLDEEGSEK 9 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 DLDEEGS(1)EK;DLDEEGS(1)EK;DLDEEGS(1)EK 115.29 0.0082148 253573100 759631 328915 486496 270966 244005 168446 413042 298614 160277 533839 TRUE FALSE 817788.9334 312581.5594 502715.5338 248827.211 234424.1377 174856.3306 358809.0892 337643.8751 174217.6037 516419.8771 1.583573696 0.605285686 0.973462789 0.481831204 0.453940966 0.338593339 0.694801082 0.653816575 0.337356503 1 18.97818501 -2.582514001 1.186488351 0.569076471 199.9999938 0.613910936 0.226210976 194.0016588 1.808360103 0.064675659 103653.7433 0.002615086 2.582514001 199.4309173 DLDEEGS(ph)EKELHENVLDK ddPTM_A459_MK2206_30min_R1 3 DLDEEGSEKELHENVLDK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK 90.882 0.003068 45507000 5399.9 6934.4 7311.3 3748.3 3227.98 4238.24 7613 5011.9 11724 16689.3 TRUE FALSE 4940.610149 6482.9693 6815.029326 4036.994715 3099.402721 4478.205486 7105.150661 4968.081487 12942.75175 18756.89648 0.263402325 0.345631235 0.363334592 0.215227222 0.165240701 0.238749811 0.37880204 0.264866925 0.690026293 1 14.19513352 -8.464593134 2.415916183 0.999101079 0.277035462 0.92718995 0.066121898 0.069580522 0.889886298 0.068722574 0.018832217 3.43E-09 8.464593134 -0.722065617 down DLDEEGS(ph)EKELHENVLDK ddPTM_A459_MK2206_30min_R2 1 DLDEEGSEKELHENVLDK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 DLDEEGS(1)EKELHENVLDK 77.668 0.0074654 33597000 35096 14155 23464 11982 10173 11067 24656 24664 11070 37008 TRUE FALSE 37782.97674 13452.08328 24246.27805 11003.03227 9773.556905 11488.16244 21418.63758 27887.66948 12032.84859 35800.43199 1.055377677 0.375751982 0.677262164 0.307343562 0.273001089 0.32089452 0.598278747 0.778975781 0.336109033 1 15.12768938 -10.10426137 8.65878089 0.99999842 0.514720338 0.256746997 0.242024611 0 0 0.232947398 0.056498043 7.87E-11 10.10426137 -0.485278081 DLDEEIFDDDDFYHQLLR ddPTM_A459_MK2206_30min_R1 2 DLDEEIFDDDDFYHQLLR 18 0 Q9NY61;A0A087WTH8;A0A087WWS8 Q9NY61 AATF Protein AATF 0 ; 238.12 9.37E-25 6154300 2612.39 2842.42 2485.96 2161.05 2512.46 2445.87 2621.18 2252.2 2498.55 2317.56 FALSE TRUE 2390.192512 2657.377941 2317.219961 2327.494445 2412.383398 2584.353046 2446.325865 2232.509253 2758.283214 2604.676829 0.917654154 1.020233263 0.889638183 0.893582812 0.926173785 0.992197196 0.939205139 0.857115642 1.058973299 1 11.34688867 -8.279163194 24.991614 1.029486661 0.932281027 0.416531172 0.047254059 955.1292019 1346775.153 0.045435232 0.011834498 5.26E-09 8.279163194 -0.097205634 DLDEMDDDDDDDDVGDHDDDHPGMEVVLHEDK ddPTM_A459_MK2206_30min_R2 1 DLDEMDDDDDDDDVGDHDDDHPGMEVVLHEDK 32 0 Q15029-3;Q15029;K7EIV5;K7EIT3 Q15029-3 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component 0 49.095 0.0048949 2658700 11796 10476 10122 10585 10385 7211.5 11798 11135 7311.6 12933 FALSE TRUE 12699.11083 9955.777074 10459.46243 9720.17164 9977.23272 7485.938686 10248.90843 12590.38273 7947.549752 12510.99727 1.015035857 0.795762069 0.836021478 0.776930202 0.797477012 0.598348679 0.819191964 1.006345255 0.635245103 1 13.61090917 -10.81211275 14.78157683 0.999980474 0.807975008 0.171995918 0.125753464 0 0 0.119889366 0.029077442 1.54E-11 10.81211275 -0.192005466 DLDEMDDDDDDDDVGDHDDDHPGMEVVLHEDKK ddPTM_A459_MK2206_30min_R2 1 DLDEMDDDDDDDDVGDHDDDHPGMEVVLHEDKK 33 1 Q15029-3;Q15029;K7EIV5;K7EIT3 Q15029-3 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component 0 54.167 0.00032498 8872800 28121 35588 34201 32901 30215 22699 40925 26806 27823 37433 FALSE TRUE 30273.96538 33820.75167 35341.24427 30212.88305 29028.60728 23562.82635 35551.49834 30309.63624 30242.99425 36211.56428 0.836030312 0.933976544 0.975965689 0.834343494 0.801639141 0.650698936 0.981771957 0.83701538 0.835175029 1 15.14416288 -5.792160532 24.46838338 0.837210667 0.917189426 0.082230717 0.096843151 328.5188292 261652.874 0.027278363 0.040465865 1.61E-06 5.792160532 0.079978758 DLDENEVERPEEENASANPPS(ph)GIEDETAENGVPKPK ddPTM_A459_MK2206_30min_R2 1 DLDENEVERPEEENASANPPSGIEDETAENGVPKPK 36 2 Q6UN15;A0A0B4J203 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 DLDENEVERPEEENAS(0.08)ANPPS(0.91)GIEDET(0.01)AENGVPKPK 62.713 5.34E-05 5442600 12956 10286 11957 9729.4 13047 7461 10908 8825.2 9192.6 13217 TRUE FALSE 13947.92132 9775.212197 12355.64041 8934.476897 12534.70922 7744.933583 9475.766497 9978.683941 9992.155732 12785.73037 1.090897502 0.764540774 0.966361721 0.698785023 0.980367086 0.605748233 0.74112047 0.780454745 0.781508404 1 13.64224696 -4.756608346 24.92052203 0.804046762 1.090897958 0.309955118 0.123620401 166.5270283 858912.2336 0.029134366 0.231682969 1.75E-05 4.756608346 0.286851196 DLDIIDNYDYSHTVK ddPTM_A459_MK2206_30min_R1 3 DLDIIDNYDYSHTVK 15 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 0 ;; 199.84 2.82E-05 31436000 13623.7 15656.6 15728.4 14139.6 13772.5 12204.4 14230.7 13501 12271.2 12743.9 FALSE TRUE 12464.93277 14637.35249 14660.80003 15228.63444 13223.91216 12895.40258 13281.39597 13382.96218 13546.83515 14322.71054 0.870291467 1.021968045 1.023605133 1.06325087 0.923282791 0.900346519 0.927296263 0.934387534 0.945829011 1 13.80601693 -6.303188246 24.91738766 0.932772818 0.998780028 0.209406104 0.052615452 651.1534535 388632.5253 0.016398174 0.018593922 4.98E-07 6.303188246 0.06600721 DLDIIDNYDYSHTVK ddPTM_A459_MK2206_30min_R2 2 DLDIIDNYDYSHTVK 15 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 0 ; 198.87 3.35E-05 18961900 134700 161507 146295 161594 154002 129390 185596 119553 140623 143442 FALSE TRUE 145012.7356 153486.7972 151172.4023 148391.2533 147955.1077 134314.0271 161227.0223 135178.9876 152854.1344 138761.4993 1.045050222 1.106119479 1.089440537 1.069397881 1.06625475 0.967948803 1.161900261 0.974182236 1.101560124 1 17.08224781 -6.533021864 24.97256667 1.043725582 1.078827327 0.08528379 0.056469215 557.5048652 1372579.11 0.017457124 0.017474905 2.93E-07 6.533021864 0.035101745 DLDLEPLS(ph)DLEEGLEETR ddPTM_A459_MK2206_30min_R1 1 DLDLEPLSDLEEGLEETR 18 0 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 DLDLEPLS(1)DLEEGLEETR 128.26 0.00085858 0 281.87 237.34 196.2 212.54 288.62 303.79 273.07 127.74 315.45 256.78 TRUE FALSE 257.8954763 221.8891229 182.8824906 228.9098676 277.1236542 320.9903273 254.8539985 126.6231826 348.2421563 288.591845 0.893633971 0.768868306 0.63370637 0.793195898 0.960261556 1.112264026 0.883094942 0.438762165 1.206694376 1 8.172886723 -6.130977708 5.492199455 0.911235349 0.758140164 0.130649464 0.19904944 0.549079249 22.2496189 0.060362928 0.078785776 7.40E-07 6.130977708 -0.153095185 DLDLLASVPS(ph)PSSSGSR ddPTM_A459_MK2206_30min_R1 3 DLDLLASVPSPSSSGSR 17 0 A0A087WV97;Q8WU79-3;Q8WU79-2;Q8WU79 A0A087WV97 SMAP2 Stromal membrane-associated protein 2 1 DLDLLAS(0.001)VPS(0.963)PS(0.03)S(0.005)S(0.001)GSR;DLDLLAS(0.008)VPS(0.992)PSSSGSR;DLDLLASVPS(0.955)PS(0.042)S(0.002)SGSR 256.89 5.03E-40 38955000 16338.4 16455.1 15184.4 12928.1 16936.2 14279.6 15773.3 14513.4 14302.2 13796.8 TRUE FALSE 14948.73328 15383.87 14153.72523 13923.8245 16261.59529 15088.09861 14721.09194 14386.51087 15788.96487 15506.05174 0.964058003 0.992120383 0.912787179 0.897960663 1.048725721 0.973045806 0.949377197 0.927799746 1.018245336 1 13.92054376 -6.235473994 24.99998755 0.980090232 0.943263315 0.219012557 0.040113355 1539.687611 1482442.369 0.012508975 0.016144318 5.81E-07 6.235473994 -0.036826917 DLDLLASVPS(ph)PSSSGSR ddPTM_A459_MK2206_30min_R2 2 DLDLLASVPSPSSSGSR 17 0 A0A087WV97;Q8WU79-3;Q8WU79-2;Q8WU79 A0A087WV97 SMAP2 Stromal membrane-associated protein 2 1 DLDLLASVPS(0.967)PS(0.032)SSGSR;DLDLLASVPS(0.945)PS(0.014)S(0.008)S(0.008)GS(0.024)R 122.46 0.0013878 8886000 34477.1 46766 50831 63791 50651 45854 40253 42547 41898 39942 TRUE FALSE 37116.69328 44443.66844 52525.68017 58579.07124 48662.18724 47599.0061 34967.73275 48108.03899 45542.21231 38638.69581 0.960609371 1.150237282 1.359406136 1.516072683 1.259415884 1.231899915 0.904992573 1.245074089 1.178668466 1 15.23775878 -7.026044379 24.52957842 1.097726548 1.262712833 0.199684309 0.158880044 1080.717488 1017857.226 0.064995521 0.050542714 9.42E-08 7.026044379 0.164986285 DLDLLASVPSPS(ph)SSGSR ddPTM_A459_MK2206_30min_R2 1 DLDLLASVPSPSSSGSR 17 0 A0A087WV97;Q8WU79-3;Q8WU79-2;Q8WU79 A0A087WV97 SMAP2 Stromal membrane-associated protein 2 1 DLDLLASVPS(0.347)PS(0.648)S(0.004)S(0.001)GSR 199.41 6.18E-08 8697200 34346 47559 39780 48991 33875 43943 39313 40701 39336 39193 TRUE FALSE 36975.55617 45197.28922 41106.24535 44988.27859 32544.89729 45615.28166 34151.15588 46020.76045 42757.37418 37914.13562 0.975244604 1.192095995 1.084193129 1.186583258 0.858384261 1.203120707 0.900749953 1.213815367 1.127742291 1 15.21044821 -14.52280844 0.004358198 0.000211252 2.078359937 0.006950009 0.125089233 670724.0502 221.4759378 56399.28624 49422.58686 3.00E-15 14.52280844 2.078148684 DLDLMLLDDS(ph)LLPLAS(ph)DPLLSTMS(ph)PEASK ddPTM_A459_MK2206_30min_R2 1 DLDLMLLDDSLLPLASDPLLSTMSPEASK 29 0 B1AKB5;B0QYS6;B0QYS7;P19484-2;P19484 B1AKB5 TFEB Transcription factor EB 3 DLDLMLLDDS(0.985)LLPLAS(0.669)DPLLS(0.274)T(0.213)MS(0.471)PEAS(0.388)K 42.661 0.031387 9248200 6380.3 17523 14671 18842 21369 18454 18628 12242 20680 10910 TRUE FALSE 6868.780674 16652.8333 15160.12382 17302.54833 20529.94569 19156.2799 16182.12122 13842.07143 22478.70902 10554.00759 0.650822033 1.577868232 1.436432908 1.63942921 1.945227489 1.815071643 1.533267916 1.311546473 2.129874251 1 13.36550331 -4.756609757 4.89760821 1.624286934 0.580482043 0.464828268 0.304396259 0.160700128 9.691016137 0.072766045 0.584259201 1.75E-05 4.756609757 -1.043804891 DLDRPESQS(ph)PK ddPTM_A459_MK2206_30min_R1 2 DLDRPESQSPK 11 1 Q8WUA4;A0A087WZD8;Q8WUA4-2 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 DLDRPES(0.001)QS(0.999)PK;DLDRPES(0.002)QS(0.998)PK 142.1 0.0045052 136418000 8217.2 9984.8 9837.8 8385.4 5923.5 4746.1 6414.9 6974.5 8217 7283.6 TRUE FALSE 7518.28399 9334.787705 9170.037546 9031.244961 5687.554452 5014.82008 5986.973726 6913.522682 9071.186555 8185.947356 0.918437862 1.140342993 1.120217019 1.103262038 0.694794897 0.612613283 0.731372127 0.844559876 1.108141326 1 12.99893367 -6.2492036 24.27045763 0.808149491 1.079095725 0.380081788 0.147289866 522.4123531 1036237.322 0.046002782 0.058909602 5.63E-07 6.2492036 0.270946234 DLDRPESQS(ph)PK ddPTM_A459_MK2206_30min_R2 3 DLDRPESQSPK 11 1 Q8WUA4;A0A087WZD8;Q8WUA4-2 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 DLDRPES(0.007)QS(0.993)PK;DLDRPES(0.071)QS(0.929)PK;DLDRPES(0.001)QS(0.999)PK 135.14 0.0072271 69271100 114404 110551 102137 87454 82001 62161 110294 83074 63691 107388 TRUE FALSE 123162.8582 105061.1981 105542.1966 80308.72845 78781.22872 64526.58041 95812.26531 93932.05704 69230.72805 103883.9384 1.185581334 1.011332452 1.015962605 0.773062032 0.758358125 0.621141068 0.922301049 0.904201925 0.666423791 1 16.66461309 -5.547598881 2.112600496 0.796681062 1.109209646 0.520825992 0.116738534 0.256760474 2.264757521 0.034023794 0.083015893 2.83E-06 5.547598881 0.312528585 DLDSLHR ddPTM_A459_MK2206_30min_R1 3 DLDSLHR 7 0 Q8NBS9-2;Q8NBS9 Q8NBS9-2 TXNDC5 Thioredoxin domain-containing protein 5 0 ;; 113.89 0.019592 14175100 24686.5 17676.7 19526 15767 28512.4 26209.3 26596.6 22554.5 17474.6 16371.1 FALSE TRUE 22586.78354 16525.94362 18200.62952 16981.37707 27376.69073 27693.24792 24822.38934 22357.30838 19291.1472 18399.27546 1.227590923 0.898184477 0.9892036 0.92293727 1.487922217 1.505127089 1.349096022 1.215118956 1.048473199 1 14.16736134 -6.246765876 24.77924433 1.294327732 1.000081193 0.336310193 0.17506434 779.3463591 1316087.089 0.053599731 0.068883036 5.67E-07 6.246765876 -0.294246538 DLEAEHVEVEDTTLNR ddPTM_A459_MK2206_30min_R1 2 DLEAEHVEVEDTTLNR 16 0 H3BV85;H3BTW0;A0A0B4J295;A0A087WZT3;H3BVE0;Q9H3K6-2;Q9H3K6 H3BV85 BOLA2B;BOLA2 BolA-like protein 2 0 ; 235.93 1.60E-16 23168000 8929.7 8353.8 8753.5 8274.9 9427.3 7796.9 8154.2 8296.1 6673.2 6413.7 FALSE TRUE 8170.182123 7809.966102 8159.336809 8912.234232 9051.790678 8238.35374 7610.248196 8223.568072 7366.90302 7208.277577 1.133444437 1.083471886 1.131939874 1.236388879 1.25574946 1.142901845 1.055765142 1.140850638 1.022006012 1 12.81543885 -8.063020348 0.999870297 1.001259155 1.162444697 0.497951153 0.056114373 0.502533302 0.955898086 0.058623395 0.021271816 8.65E-09 8.063020348 0.161185542 DLEAEHVEVEDTTLNR ddPTM_A459_MK2206_30min_R2 2 DLEAEHVEVEDTTLNR 16 0 H3BV85;H3BTW0;A0A0B4J295;A0A087WZT3;H3BVE0;Q9H3K6-2;Q9H3K6 H3BV85 BOLA2B;BOLA2 BolA-like protein 2 0 ; 198.38 1.34E-06 18807200 48623 61195 54732 66047 61824 59209 60223 51230 57837 55590 FALSE TRUE 52345.61426 58156.14529 56556.73756 60650.74883 59396.47912 61462.23998 52315.64776 57925.9369 62867.55771 53776.10285 0.973399177 1.081449607 1.051707628 1.127838308 1.104514384 1.142928489 0.972841931 1.077168739 1.169061244 1 15.71467759 -4.760640639 6.934182848 1.083261838 0.970925291 0.235723758 0.057895233 0.166773523 44.88477645 0.014205107 0.087832888 1.74E-05 4.760640639 -0.112336547 DLEAHIDSANK ddPTM_A459_MK2206_30min_R1 2 DLEAHIDSANK 11 0 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 ; 147.28 0.00094036 25463000 25815 22790 25149 21076 25415 22719 25225 23424 20505.9 19717.7 FALSE TRUE 23619.29869 21306.36686 23441.95595 22699.27717 24402.66673 24005.33015 23542.28628 23219.20644 22637.56169 22160.47754 1.065829861 0.96145793 1.057827202 1.024313539 1.101179643 1.083249678 1.062354646 1.047775545 1.021528604 1 14.43570135 -1.890893415 17.35491409 1.04485231 1.065724069 0 0.039373338 0 0 0.009190128 0 0.012856021 1.890893415 0.020871759 DLEDSLAR ddPTM_A459_MK2206_30min_R1 2 DLEDSLAR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 171.38 0.0022481 26257000 16075 15397.8 15522.1 13588.1 15760.2 14148.5 15935.7 14336.1 14992.9 14830 FALSE TRUE 14707.73684 14395.40042 14468.5031 14634.65782 15132.43786 14949.57584 14872.65853 14210.76099 16551.46561 16667.25236 0.8824332 0.863693674 0.86807968 0.878048613 0.907914366 0.896943031 0.892328154 0.852615697 0.993053039 1 14.02472867 -8.271396533 24.80517332 0.996526557 0.881105892 0.89952892 0.015541064 207.5834498 517123.5828 0.01542971 0.004181514 5.35E-09 8.271396533 -0.115420665 DLEDSLAR ddPTM_A459_MK2206_30min_R2 2 DLEDSLAR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 157.33 0.007526 24051900 108512 109108 95203 115493 106029 97699 121791 84749 92409 111763 FALSE TRUE 116819.7622 103689.8554 98377.0205 106056.8525 101865.7687 101417.0039 105799.6954 95825.98529 100446.5678 108116.1825 1.0805021 0.959059532 0.90991948 0.98095262 0.942187991 0.938037226 0.978574095 0.886324166 0.929061362 1 16.72222295 -4.768793597 4.344298258 0.943075073 1.092085088 0.605601828 0.03238769 0.133404144 5.286415371 0.007825107 0.062315928 1.70E-05 4.768793597 0.149010015 DLEEDHACIPIK ddPTM_A459_MK2206_30min_R2 4 DLEEDHACIPIK 12 0 P13639 P13639 EEF2 Elongation factor 2 0 ;;; 107.85 0.011674 7785300 81008 79584 74539 88727 78387 70456 85886 78950 66158 86774 FALSE TRUE 87210.03476 75631.97429 77024.09306 81477.72028 75309.13252 73137.25245 74609.06503 89269.03608 71912.30325 83942.57149 1.038924984 0.900996633 0.917580814 0.970636458 0.897150649 0.871277245 0.888810811 1.063453674 0.85668454 1 16.35711504 -10.89358417 3.561139859 1.000382865 0.933130992 0.082185138 0.066171191 93451611.97 93601265.11 343829.5536 0.015978872 1.28E-11 10.89358417 -0.067251874 DLEEDHACIPIKK ddPTM_A459_MK2206_30min_R2 2 DLEEDHACIPIKK 13 1 P13639 P13639 EEF2 Elongation factor 2 0 ; 86.463 0.017839 15951000 171366 184770 184219 215100 196425 159744 217270 165335 161693 202519 FALSE TRUE 184485.9127 175594.5905 190360.7695 197525.6419 188712.3675 165823.1699 188742.188 186944.8522 175756.7649 195910.8216 0.941683115 0.896298576 0.971670518 1.008242629 0.963256476 0.846421696 0.96340869 0.954234435 0.897126373 1 17.57983757 DLEGSDIDTR ddPTM_A459_MK2206_30min_R2 2 DLEGSDIDTR 10 0 P55060-4;P55060-3;P55060 P55060-4 CSE1L Exportin-2 0 ; 166.09 0.0046652 14502800 75590 96476 76399 94846 95699 97158 99210 65274 88735 86857 FALSE TRUE 81377.22852 91685.14213 78946.10453 87096.7784 91941.37641 100855.4158 86183.60783 73805.53592 96453.0099 84022.8632 0.968512919 1.091192785 0.939578842 1.036584271 1.094242363 1.200333004 1.025716151 0.878398249 1.147937671 1 16.35849433 -1.558681023 19.52602739 1.039264845 0.005203792 0 0.092749906 0 0 0.021397909 0 0.027626062 1.558681023 -1.034061053 DLELALS(ph)PIHNSSALPTTGR ddPTM_A459_MK2206_30min_R1 4 DLELALSPIHNSSALPTTGR 20 0 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 DLELALS(1)PIHNSSALPTTGR;DLELALS(1)PIHNSSALPTTGR;DLELALS(1)PIHNSSALPTTGR;DLELALS(1)PIHNSSALPTTGR 121.5 0.0001628 61087000 5814.2 4070.58 4183.23 3364.84 8294.2 8042.4 7004.6 5196.24 3708.47 3631.07 TRUE FALSE 5319.671758 3805.584502 3899.284003 3624.00056 7963.824451 8497.753738 6537.335915 5150.809822 4093.978727 4080.914365 1.30354898 0.932532311 0.955492729 0.888036414 1.951480413 2.082316113 1.601929208 1.262170524 1.003201332 1 11.99467672 -6.238645832 24.6333506 1.532485473 1.009061122 0.289501387 0.350648271 846.174997 914474.4939 0.11195867 0.144431108 5.77E-07 6.238645832 -0.523424351 DLELALS(ph)PIHNSSALPTTGR ddPTM_A459_MK2206_30min_R2 3 DLELALSPIHNSSALPTTGR 20 0 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 DLELALS(1)PIHNSSALPTTGR;DLELALS(1)PIHNSSALPTTGR;DLELALS(1)PIHNSSALPTTGR 102.92 0.00040509 35436100 14525.8 33729.6 25454.8 48931.3 57953.3 87684 43777.4 28659.3 53342 24161.9 TRUE FALSE 15637.90642 32054.63711 26303.45033 44933.45627 55677.76225 91020.87606 38029.37479 32405.16891 57981.59074 23373.49918 0.669044301 1.371409427 1.125353552 1.92241033 2.382089298 3.894191253 1.62702959 1.386406402 2.480655134 1 14.51258611 -5.825532507 3.147585492 2.208635251 1.061097038 0.286943758 0.753369446 0.321744308 6.435473606 0.228415583 0.377593796 1.49E-06 5.825532507 -1.147538213 DLELPSQEAPSFQGT(ph)ESPKPCK ddPTM_A459_MK2206_30min_R2 1 DLELPSQEAPSFQGTESPKPCK 22 1 Q6PJF5;Q6PJF5-2;K7EPV3 Q6PJF5 RHBDF2 Inactive rhomboid protein 2 1 DLELPSQEAPS(0.028)FQGT(0.535)ES(0.436)PKPCK 54.672 0.037402 18156000 67640 42213 46501 35457 36109 32437 69060 36203 54193 61077 TRUE FALSE 72818.57041 40116.7638 48051.32013 32560.04968 34691.17923 33671.41276 59992.33904 40934.8564 58906.60918 59084.06249 1.232457068 0.67897775 0.813270417 0.551080077 0.587149525 0.569889939 1.015372615 0.692823998 0.996996596 1 15.85048141 -8.271506058 22.91519209 0.998498521 0.754626819 0.168929419 0.203200325 431.0386156 981156.8553 0.186462965 0.050821038 5.35E-09 8.271506058 -0.243871702 DLELPSQEAPSFQGTES(ph)PKPCK ddPTM_A459_MK2206_30min_R1 2 DLELPSQEAPSFQGTESPKPCK 22 1 Q6PJF5;Q6PJF5-2;K7EPV3 Q6PJF5 RHBDF2 Inactive rhomboid protein 2 1 DLELPSQEAPSFQGT(0.091)ES(0.908)PKPCK;DLELPSQEAPS(0.004)FQGT(0.317)ES(0.679)PKPCK 100.7 7.16E-05 19283000 5435.7 6425 5520.8 5842.4 4773.9 4974.3 5872.4 6556 7778 7693.1 TRUE FALSE 4973.365171 6006.731332 5146.063478 6292.38266 4583.745454 5255.940567 5480.662911 6498.681583 8586.550934 8646.179308 0.57520958 0.694726667 0.595183525 0.727764535 0.530146934 0.607891692 0.633882634 0.75162466 0.9931035 1 13.07784704 -8.124109604 2.34325915 1.011217333 0.624544517 0.883273784 0.053633771 0.093228037 0.915337773 0.045744881 0.014247256 7.51E-09 8.124109604 -0.386672816 DLELPSQEAPSFQGTES(ph)PKPCK ddPTM_A459_MK2206_30min_R2 1 DLELPSQEAPSFQGTESPKPCK 22 1 Q6PJF5;Q6PJF5-2;K7EPV3 Q6PJF5 RHBDF2 Inactive rhomboid protein 2 1 DLELPSQEAPS(0.001)FQGT(0.296)ES(0.703)PKPCK 74.525 0.0010698 16732000 86539 45287 61504 35870 37283 36111 78380 32732 53827 78341 TRUE FALSE 93164.49238 43038.11343 63554.51266 32939.30626 35819.08209 37485.22941 68088.61185 37010.18479 58508.77516 75784.73959 1.229330508 0.56789947 0.83861887 0.434642996 0.472642412 0.494627673 0.898447527 0.488359332 0.772039008 1 16.20961975 -10.05510713 14.27937512 1.000004501 0.670147579 0.128361618 0.239238465 0 0 0.225398372 0.054667135 8.81E-11 10.05510713 -0.329856923 DLENGSHIR ddPTM_A459_MK2206_30min_R1 1 DLENGSHIR 9 0 J3KQ69;A0A499FHX9;P25205;P25205-2 J3KQ69 MCM3 DNA replication licensing factor MCM3 0 117.7 0.010466 2906200 3521.9 3586.9 3947.1 3122.3 3995.7 3893.1 3878.9 3318.4 2974.4 2880.1 FALSE TRUE 3222.343911 3353.392158 3679.181849 3362.780087 3836.542808 4113.523958 3620.145658 3289.387579 3283.599524 3236.908532 0.995500453 1.035986073 1.136634481 1.038886349 1.185249064 1.27081872 1.118396032 1.016212706 1.014424563 1 11.66040088 -7.770264111 7.923410055 1.011048216 1.115918239 0.27647027 0.074975409 0.201250765 83.37655924 0.043522311 0.022245542 1.70E-08 7.770264111 0.104870023 DLENGSHIR ddPTM_A459_MK2206_30min_R2 2 DLENGSHIR 9 0 J3KQ69;A0A499FHX9;P25205;P25205-2 J3KQ69 MCM3 DNA replication licensing factor MCM3 0 ; 146.11 0.0025016 5406900 50032 56810 58093 73307 59872 60897 62454 44532 51926 56351 FALSE TRUE 53862.48839 53988.89801 60029.79163 67317.5836 57521.12445 63214.47801 54253.71478 50352.4853 56442.42962 54512.27148 0.988080058 0.990398979 1.101216111 1.234906963 1.055195883 1.159637569 0.995256908 0.92369083 1.035407773 1 15.73429342 -7.405976366 7.249400402 0.979857592 1.089325534 0.3047609 0.073585752 0.336107262 18.84060522 0.033260807 0.022290721 3.93E-08 7.405976366 0.109467942 DLENS(ph)PPLIESSPTLCSEEHAR ddPTM_A459_MK2206_30min_R2 1 DLENSPPLIESSPTLCSEEHAR 22 0 H3BMS5;Q6ZVD8-3;Q6ZVD8 H3BMS5 PHLPP2 PH domain leucine-rich repeat-containing protein phosphatase 2 1 DLENS(0.689)PPLIES(0.296)S(0.013)PT(0.002)LCSEEHAR 59.996 0.010592 2655700 5929.7 8309.1 7646.4 10114 9355.2 8884.3 10392 9377.3 8510.7 9555.4 TRUE FALSE 6383.682391 7896.482177 7901.32716 9287.653847 8987.867842 9222.398262 9027.517917 10602.94531 9250.945302 9243.608081 0.690605047 0.854264061 0.854788205 1.004764997 0.972333288 0.997705461 0.976622747 1.147056995 1.000793762 1 13.17424038 -3.85790021 0.485404542 1.043100222 7.42E-21 0.810741071 0.050717098 4.275262291 0.391937084 0.030148756 3.08468336 0.000138707 3.85790021 -1.043100222 DLESAEERR ddPTM_A459_MK2206_30min_R1 1 DLESAEERR 9 1 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 0 89.047 0.041114 1553700 621.72 615.02 768.76 668.08 1034.7 543.92 642.19 734.75 653.39 350.18 FALSE TRUE 568.8394492 574.9820862 716.5787131 719.5356374 993.485708 574.7162804 599.3506768 728.3261582 721.3122287 393.5629421 1.44535826 1.460966023 1.820747424 1.828260642 2.524337537 1.460290639 1.522883922 1.850596386 1.832774765 1 8.620450573 -10.60924029 4.728306436 0.99996381 1.756080275 0.349631714 0.306584254 0.000123002 2.38E-05 0.312166394 0.07570786 2.46E-11 10.60924029 0.756116466 DLESAQS(ph)LNR ddPTM_A459_MK2206_30min_R2 2 DLESAQSLNR 10 0 P78504-2;P78504 P78504-2 JAG1 Protein jagged-1 1 DLESAQS(1)LNR;DLES(0.002)AQS(0.998)LNR 132.86 0.0023684 25011000 51061 62813 56242 65374 53270 59086 69718 42062 61071 66005 TRUE FALSE 54970.26942 59693.79776 58117.08021 60032.73508 51178.35214 61334.55913 60563.94285 47559.64782 66382.84519 63851.26226 0.860911241 0.934888296 0.910194696 0.940196528 0.801524517 0.960584912 0.948515984 0.74485055 1.039648127 1 15.96242752 DLESCS(ph)DDDNQGSK ddPTM_A459_MK2206_30min_R1 2 DLESCSDDDNQGSK 14 0 Q5T3I0;Q5T3I0-3;F8W895;A0A0A0MRK1;E9PAV9 Q5T3I0 GPATCH4 G patch domain-containing protein 4 1 DLES(0.002)CS(0.998)DDDNQGSK;DLES(0.001)CS(0.999)DDDNQGSK 175.27 7.05E-05 15351200 6212.5 5976 6220.1 5272.5 4532.2 4540.6 5943.7 4934.1 6456.7 7141 TRUE FALSE 5684.094252 5586.961314 5797.896942 5678.588864 4351.672877 4797.684848 5547.206618 4890.961684 7127.897071 8025.680992 0.708238249 0.696135483 0.722418066 0.707552277 0.542218521 0.597791621 0.691182047 0.609413916 0.888136107 1 12.9704081 -8.42223559 3.665015251 0.996969122 0.659704537 0.8075344 0.056694214 0.096068988 2.272523184 0.059376094 0.015697405 3.78E-09 8.42223559 -0.337264585 DLESCS(ph)DDDNQGSK ddPTM_A459_MK2206_30min_R2 4 DLESCSDDDNQGSK 14 0 Q5T3I0;Q5T3I0-3;F8W895;A0A0A0MRK1;E9PAV9 Q5T3I0 GPATCH4 G patch domain-containing protein 4 1 DLES(0.003)CS(0.997)DDDNQGSK;DLES(0.002)CS(0.998)DDDNQGSK;DLES(0.001)CS(0.999)DDDNQGSK;DLES(0.053)CS(0.947)DDDNQGSK 225.6 6.06E-10 88756000 372521 337885 326665 301081 316392 243370 382519 284314 230139 378265 TRUE FALSE 401041.4942 321106.1222 337555.8481 276481.7192 303968.8603 252631.6159 332293.7958 321474.816 250156.0742 365922.244 1.095974625 0.87752556 0.922479717 0.755575054 0.830692491 0.69039699 0.90809947 0.878533134 0.683631778 1 18.48117759 -3.563294605 1.011489895 0.818733462 3.668505974 0.402881784 0.095769876 17.42533002 2.055874387 0.028885369 93.66925047 0.000273341 3.563294605 2.849772512 DLETQPHMQEFR ddPTM_A459_MK2206_30min_R1 1 DLETQPHMQEFR 12 0 E2QRI1;Q32P28-2;Q32P28-4;Q32P28;Q32P28-3 E2QRI1 P3H1;LEPRE1 Prolyl 3-hydroxylase 1 0 137.01 0.027216 4579100 1849.3 1064.9 1560 1127.3 2095.6 1968.2 1804.5 1805.2 1287.5 1395.6 FALSE TRUE 1692.007324 995.5748164 1454.111546 1214.124841 2012.127814 2079.637783 1684.125097 1789.417327 1421.340232 1568.497464 1.078744061 0.634731543 0.927072934 0.774068731 1.282837786 1.325878958 1.073718725 1.140848084 0.90617949 1 10.61516748 -6.252061168 24.97706843 1.136441746 0.843261154 0.411708059 0.156095402 619.9969576 1651241.942 0.046070783 0.058657613 5.60E-07 6.252061168 -0.293180592 DLFAFQES(ph)PPR ddPTM_A459_MK2206_30min_R1 5 DLFAFQESPPR 11 0 E7EX48;P51957-3;P51957-2;P51957 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 DLFAFQES(1)PPR;DLFAFQES(1)PPR;DLFAFQES(1)PPR;DLFAFQES(1)PPR;DLFAFQES(1)PPR 182.37 3.69E-05 22881700 6198.2 6112.95 5514.78 5251.78 6340.64 4979 6134.87 6188.19 5413.29 5421.49 TRUE FALSE 5671.010542 5714.995844 5140.452099 5656.273006 6088.078882 5260.906677 5725.624016 6134.087307 5976.020867 6093.145111 0.930719758 0.937938575 0.843645113 0.92830105 0.999168536 0.863413981 0.939682859 1.006719386 0.980777703 1 12.57297138 -7.642343729 4.773096779 0.994827281 0.917788411 0.431534145 0.040250823 0.211467811 7.864825281 0.020311794 0.01128943 2.28E-08 7.642343729 -0.07703887 DLFAFQES(ph)PPR ddPTM_A459_MK2206_30min_R2 2 DLFAFQESPPR 11 0 E7EX48;P51957-3;P51957-2;P51957 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 DLFAFQES(1)PPR;DLFAFQES(1)PPR 117.27 0.0056476 4526800 16123.5 19087.7 18226.1 20661.6 19449.4 17584.5 23245.2 14345.3 19518.6 21581.6 TRUE FALSE 17357.92756 18139.83257 18833.74908 18973.48119 18685.71883 18253.69047 20193.07732 16220.27996 21216.29255 20877.39416 0.831422132 0.868874364 0.902112061 0.908805047 0.895021605 0.874328009 0.967222114 0.776930293 1.016232792 1 14.34965403 -14.52287875 0.111739761 1.364735202 0.829204069 0.308174565 0.058486958 213.6514239 1.57458894 17.59619459 0.662731979 3.00E-15 14.52287875 -0.535531132 DLFDLNS(ph)SEEDDTEGFSER ddPTM_A459_MK2206_30min_R1 2 DLFDLNSSEEDDTEGFSER 19 0 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 DLFDLNS(0.912)S(0.088)EEDDTEGFSER;DLFDLNS(0.5)S(0.5)EEDDTEGFSER 305.63 6.50E-101 12956800 5595.9 5295.1 4865.9 4467.6 5503.4 5222.8 5067.6 5473.2 4618.9 4292 TRUE FALSE 5119.93932 4950.388028 4535.616265 4811.695326 5284.187924 5518.510423 4729.54965 5425.348389 5099.051184 4823.725363 1.061407716 1.026258266 0.940272491 0.997506069 1.095457873 1.144034954 0.98047656 1.124721658 1.057077425 1 12.23593205 -6.252491387 24.43021223 1.072726929 1.003061736 0.220692795 0.055013557 668.9095259 1826286.287 0.016259256 0.020684938 5.59E-07 6.252491387 -0.069665192 DLFDLNS(ph)SEEDDTEGFSER ddPTM_A459_MK2206_30min_R2 2 DLFDLNSSEEDDTEGFSER 19 0 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 DLFDLNS(0.917)S(0.083)EEDDTEGFSER;DLFDLNS(0.5)S(0.5)EEDDTEGFSER 174.15 9.19E-10 4494600 14341.1 15895.3 14350.7 19000.8 19636.9 19223.3 18759.3 17534.7 15990.3 18013.5 TRUE FALSE 15439.06564 15105.96252 14829.14518 17448.37386 18865.85664 19954.85615 16296.18138 19826.5455 17381.10739 17425.72097 0.885992934 0.866877333 0.850991772 1.001299969 1.082644252 1.145138051 0.93517975 1.13777476 0.997439786 1 14.08893073 -5.881698887 3.858082679 1.054841875 0.867689705 0.637103307 0.061160183 0.13247735 3.684289022 0.016979151 0.026371102 1.31E-06 5.881698887 -0.187152171 DLFDYS(ph)PPLHK ddPTM_A459_MK2206_30min_R1 1 DLFDYSPPLHK 11 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 DLFDYS(1)PPLHK 75.483 0.035184 320920000 9443.7 13098 10694 14024 8261.1 6934.4 7753.9 8508.7 10457 9716.2 TRUE FALSE 8640.463724 12245.31782 9968.121075 15104.13091 7932.042894 7327.019735 7236.651479 8434.309333 11544.04257 10919.91621 0.791257328 1.121374705 0.912838605 1.383172784 0.726383128 0.670977652 0.662702107 0.772378576 1.057154867 1 13.41467417 DLFDYS(ph)PPLHK ddPTM_A459_MK2206_30min_R2 2 DLFDYSPPLHK 11 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 DLFDY(0.001)S(0.999)PPLHK;DLFDYS(1)PPLHK 107.46 0.0069654 104017000 177450 192278 178521 206131 187277 163921 194756 164141 154626 190715 TRUE FALSE 191035.7084 182729.7541 184472.801 189289.4379 179923.564 170159.1285 169184.3033 185594.7923 168075.09 184491.9852 1.035468876 0.990448197 0.999896016 1.026003584 0.975237834 0.922311765 0.91702793 1.005977534 0.911015673 1 17.49319862 -6.488391157 5.14577171 0.949256355 1.009800788 0.4458023 0.032295774 0.182431202 12.52471353 0.010035671 0.011006661 3.25E-07 6.488391157 0.060544433 DLFEDELVPLFEK ddPTM_A459_MK2206_30min_R1 1 DLFEDELVPLFEK 13 0 O60506-2;O60506;O60506-4;O60506-3;B7Z645;F6UXX1;O60506-5 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 132.03 0.020286 16970000 980.73 1298.4 1435.7 1238.3 1399.4 1156.1 1265.4 1064.7 1003 1125.2 FALSE TRUE 897.3137635 1213.873924 1338.248684 1333.674081 1343.658935 1221.557383 1180.987475 1055.39144 1107.265439 1264.598271 0.709564282 0.959888964 1.058240166 1.05462273 1.062518403 0.965964774 0.933883512 0.834566569 0.87558671 1 10.30446344 -7.424841267 3.46903349 0.890419526 0.980189295 0.06109125 0.103866596 0.563185274 12.64469027 0.050679721 0.03165712 3.76E-08 7.424841267 0.08976977 DLFETGLEDENNS(ph)PLEDEESLESIR ddPTM_A459_MK2206_30min_R1 1 DLFETGLEDENNSPLEDEESLESIR 25 0 E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4 E7ESG2 CLSPN Claspin 1 DLFETGLEDENNS(1)PLEDEESLESIR 112.99 8.10E-08 1015300 180.72 0 151.96 118.06 243.27 219.68 245.48 62.981 310.67 248.82 TRUE FALSE 165.348815 0 141.6453786 127.1530017 233.5800408 232.1180918 229.1044771 62.43036376 342.9652582 279.6457001 0.591279662 0 0.506517277 0.454693212 0.835271348 0.830043486 0.81926694 0.223248073 1.226427791 1 8.127456337 -6.013017503 2.02162102 0.784672797 0.314878974 0.362152212 0.278607832 0.365788893 2.995789459 0.086531465 0.135859928 9.70E-07 6.013017503 -0.469793823 DLFPDGS(ph)IS(ph)S(ph)ST(ph)K ddPTM_A459_MK2206_30min_R1 1 DLFPDGSISSSTK 13 0 A0A0A0MQW3;Q9UIV8-2;Q9UIV8 A0A0A0MQW3 SERPINB13 Serpin B13 4 DLFPDGS(0.999)IS(0.979)S(0.85)S(0.202)T(0.97)K 68.847 0.042331 0 364.51 451.42 379.66 293.46 422.98 302.58 491.58 384.54 327.59 426.3 TRUE FALSE 333.5065104 422.032476 353.889737 316.06234 406.1318109 319.7118181 458.7875951 381.1780073 361.6441528 479.1132624 0.696091168 0.880861602 0.738634817 0.659681885 0.847673907 0.667299036 0.957576488 0.795590599 0.75481975 1 8.904222939 -7.257977431 24.99279645 0.85996259 0.754435433 0.300431859 0.094466618 464.0399746 3350052.441 0.036205997 0.026885575 5.52E-08 7.257977431 -0.105527157 DLFPYEESK ddPTM_A459_MK2206_30min_R1 1 DLFPYEESK 9 0 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 0 120.31 0.044287 0 2949.6 2781.7 3007.5 2515.7 2978.8 2940 3054.2 2406.1 2729.7 2718 FALSE TRUE 2698.721031 2600.610824 2803.359279 2709.45965 2860.148088 3106.460259 2850.459891 2385.063721 3013.462083 3054.72636 0.883457539 0.851340028 0.917712079 0.88697295 0.936302553 1.01693569 0.933131009 0.780778191 0.986491662 1 11.57682743 -5.712099604 1.517800487 0.932452216 0.86979645 0.15167953 0.063263939 0.94271374 4.348840368 0.021313298 0.051597178 1.94E-06 5.712099604 -0.062655766 DLFSLDS(ph)EDPSPASPPLR ddPTM_A459_MK2206_30min_R2 1 DLFSLDSEDPSPASPPLR 18 0 H3BTX0;Q9BTK6 H3BTX0 PAGR1 PAXIP1-associated glutamate-rich protein 1 1 DLFS(0.279)LDS(0.316)EDPS(0.152)PAS(0.253)PPLR 86.548 0.0072155 1043300 4155.4 4503.9 2989 5206.6 5418.7 5138.7 6813.3 3176.4 3404.2 4478.7 TRUE FALSE 4473.540619 4280.242875 3088.651768 4781.204125 5205.934611 5334.256829 5918.705526 3591.566386 3700.291163 4332.560386 1.032539704 0.987924574 0.712892953 1.103551641 1.201583855 1.231201958 1.366098796 0.828970878 0.854065687 1 12.08100414 -5.887389673 17.64801486 1.099489924 0.916875318 0.167077878 0.173848651 2.457911026 373.442773 0.053340818 0.079118815 1.30E-06 5.887389673 -0.182614606 DLFSLDSEDPSPAS(ph)PPLR ddPTM_A459_MK2206_30min_R1 5 DLFSLDSEDPSPASPPLR 18 0 H3BTX0;Q9BTK6 H3BTX0 PAGR1 PAXIP1-associated glutamate-rich protein 1 1 DLFSLDSEDPS(0.001)PAS(0.999)PPLR;DLFSLDSEDPS(0.05)PAS(0.95)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPS(0.006)PAS(0.994)PPLR;DLFSLDSEDPS(0.005)PAS(0.995)PPLR 352.06 9.09E-184 205337000 9550.44 9732.55 10031.67 9003.51 10414.1 9227.02 10337.33 9323.28 8141.96 7349.96 TRUE FALSE 8738.124927 9098.959226 9350.74819 9696.9619 9999.284345 9749.445899 9647.745577 9241.767546 8988.345878 8260.528534 1.057816687 1.101498432 1.131979407 1.173891218 1.210489656 1.180244806 1.167933206 1.118786468 1.088107842 1 13.01201838 -8.563135183 1.623664474 1.001035467 1.148194192 0.537382843 0.041202346 0.370777275 2.167151671 0.044445894 0.012863489 2.73E-09 8.563135183 0.147158725 DLFSLDSEDPSPAS(ph)PPLR ddPTM_A459_MK2206_30min_R2 10 DLFSLDSEDPSPASPPLR 18 0 H3BTX0;Q9BTK6 H3BTX0 PAGR1 PAXIP1-associated glutamate-rich protein 1 1 DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPS(0.001)PAS(0.999)PPLR;DLFSLDSEDPS(0.002)PAS(0.998)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPS(0.033)PAS(0.967)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDS(0.001)EDPS(0.116)PAS(0.883)PPLR;DLFSLDSEDPS(0.008)PAS(0.992)PPLR;DLFSLDSEDPS(0.062)PAS(0.938)PPLR;DLFSLDS(0.001)EDPS(0.082)PAS(0.917)PPLR 242.9 2.77E-25 50748100 140209.99 171904.1 141472.65 177174.7 156056 166259.8 162943.3 137382.7 150324.01 147327.2 TRUE FALSE 150944.5746 163367.5924 146189.2775 162698.9603 149928.4573 172586.9332 141548.649 155339.0906 163398.9207 142519.9255 1.059112079 1.146278962 1.025746239 1.141587463 1.051982428 1.210967046 0.993184977 1.089946476 1.146498779 1 17.12080411 -10.53528936 4.205001204 0.999993952 1.095753145 0.174990637 0.062622969 7974606.831 9989865.543 367.0579838 0.01405724 2.92E-11 10.53528936 0.095759194 DLGHPVEEEDELES(ph)GDQEDEDDESEDPGKDLDHI ddPTM_A459_MK2206_30min_R1 1 DLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI 34 1 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 1 DLGHPVEEEDELES(0.926)GDQEDEDDES(0.074)EDPGKDLDHI 84.097 7.68E-08 4501800 867.41 1056.4 1179.2 953.41 579.31 726.9 882.42 873.41 788.95 906.66 TRUE FALSE 793.6322245 987.628168 1099.159189 1026.841803 556.234856 768.0564498 823.5553719 865.7738685 870.9641758 1018.983886 0.778846688 0.969228446 1.078681621 1.007711523 0.545872083 0.753747395 0.808212361 0.849644318 0.854737929 1 9.992915521 DLGHPVEEEDELES(ph)GDQEDEDDESEDPGKDLDHI ddPTM_A459_MK2206_30min_R2 1 DLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI 34 1 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 1 DLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI 105.58 2.75E-14 3985300 31109 28777 27666 28171 27438 23701 31274 26414 25743 27520 TRUE FALSE 33490.72896 27347.97603 28588.37063 25869.33919 26360.64626 24602.95816 27167.68623 29866.40049 27982.07961 26622.02465 1.258008337 1.027268827 1.073861624 0.971726964 0.990181874 0.924158041 1.020496622 1.12186811 1.051087585 1 14.70033267 -4.280762463 1.741350506 1.01627674 1.902471673 0.643383663 0.052759537 3.345731286 3.026180606 0.015817614 7.627798125 5.24E-05 4.280762463 0.886194933 DLGSTEDGDGT(ph)DDFLTDKEDEK ddPTM_A459_MK2206_30min_R1 2 DLGSTEDGDGTDDFLTDKEDEK 22 1 Q15527 Q15527 SURF2 Surfeit locus protein 2 1 DLGST(0.002)EDGDGT(0.98)DDFLT(0.018)DKEDEK;DLGST(0.001)EDGDGT(0.998)DDFLT(0.001)DKEDEK 140.67 1.12E-05 8483000 1453.59 1895.45 1633 2017.36 1229.56 875.7 1359.15 1446.87 1615.79 1735.58 TRUE FALSE 1329.954537 1772.05586 1522.15651 2172.737417 1180.584022 925.2813772 1268.483583 1434.220168 1783.757153 1950.596753 0.681819313 0.908468579 0.780354272 1.113883437 0.605242483 0.474358104 0.650305391 0.735272509 0.914467406 1 10.92969985 -4.464937329 14.2379711 0.779318652 0.030382857 0.025982711 0.183702954 4676758.469 35186477.52 0.048332548 96825336.35 3.43E-05 4.464937329 -0.748935795 DLGSTEDGDGTDDFLT(ph)DKEDEK ddPTM_A459_MK2206_30min_R1 1 DLGSTEDGDGTDDFLTDKEDEK 22 1 Q15527 Q15527 SURF2 Surfeit locus protein 2 1 DLGSTEDGDGT(0.005)DDFLT(0.995)DKEDEK 70.02 0.0059878 2606200 711.52 764.12 718.36 501.2 361.93 420.05 580.96 616.2 662.86 584.17 TRUE FALSE 651.0014877 714.3756491 669.5997247 539.8025108 347.5135617 443.832868 542.2052184 610.8126284 731.7666691 656.5413899 0.991561991 1.088089281 1.019889584 0.822191136 0.52930945 0.676016585 0.825850779 0.930349004 1.114578122 1 9.358742155 -5.745632172 5.815843752 0.818518425 1.04119423 0.230228052 0.155527021 0.234133292 25.7668969 0.047413779 0.07907695 1.80E-06 5.745632172 0.222675805 DLGTQNHTSELILSS(ph)PPGQK ddPTM_A459_MK2206_30min_R2 1 DLGTQNHTSELILSSPPGQK 20 0 Q9ULD2;Q9ULD2-5;H0YC63;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 DLGTQNHTSELILS(0.172)S(0.828)PPGQK 147.26 1.45E-05 6129900 14079 46362 25923 81100 58695 94123 58844 40962 47654 28104 TRUE FALSE 15156.89906 44059.7305 26787.25988 74473.87057 56390.33938 97704.91672 51117.71212 46315.87404 51798.85878 27186.96878 0.557506031 1.620619454 0.985297776 2.739322327 2.074167953 3.593814283 1.880228448 1.703605665 1.905282608 1 14.73062769 -5.747835627 24.97506701 2.205878349 1.111088522 0.334455884 0.686513093 264.1206496 484893.7264 0.186204387 0.320283681 1.79E-06 5.747835627 -1.094789827 DLHILPPPLIPT(ph)PPPDDPR ddPTM_A459_MK2206_30min_R1 2 DLHILPPPLIPTPPPDDPR 19 0 Q9NRS6;E9PK26;E9PMW6;Q9NRS6-2 Q9NRS6 SNX15 Sorting nexin-15 1 DLHILPPPLIPT(1)PPPDDPR;DLHILPPPLIPT(1)PPPDDPR 91.733 0.0032628 4768100 2287.09 2211.04 2388.76 2098.63 2388.83 2029.71 2053.62 2109.39 2149.47 2068.35 TRUE FALSE 2092.560986 2067.100894 2226.617627 2260.266846 2293.677843 2144.630426 1916.626757 2090.947826 2372.915098 2324.592813 0.900183883 0.889231388 0.957852753 0.972328071 0.986700909 0.922583264 0.824499992 0.899489929 1.020787419 1 11.18276231 -8.265539767 24.84859554 1.010393723 0.920393565 0.403017171 0.044418413 388.8638496 2356487.96 0.042831604 0.01266217 5.43E-09 8.265539767 -0.090000159 DLHILPPPLIPT(ph)PPPDDPR ddPTM_A459_MK2206_30min_R2 2 DLHILPPPLIPTPPPDDPR 19 0 Q9NRS6;E9PK26;E9PMW6;Q9NRS6-2 Q9NRS6 SNX15 Sorting nexin-15 1 DLHILPPPLIPT(1)PPPDDPR;DLHILPPPLIPT(1)PPPDDPR 66.31 0.030627 5711500 6175.4 7777 5609 9837.5 9406.5 8651 7718.5 5511.7 8034.2 9684.4 TRUE FALSE 6648.193372 7390.805489 5796.001261 9033.744781 9037.153546 8980.219867 6705.051678 6232.098114 8733.000193 9368.398821 0.709640302 0.788908076 0.61867576 0.964278417 0.964642274 0.958565069 0.715709462 0.665225535 0.93217639 1 13.19358678 -5.76192274 24.9999904 0.871080571 0.714058056 0.343758254 0.1125533 17.97538397 929805.664 0.033923805 0.054002183 1.73E-06 5.76192274 -0.157022516 DLHQGIEAAS(ph)DEEDLR ddPTM_A459_MK2206_30min_R2 2 DLHQGIEAASDEEDLR 16 0 A0A0C4DGG1;Q9UKS6;E9PIY1 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 DLHQGIEAAS(1)DEEDLR;DLHQGIEAAS(1)DEEDLR 169.51 3.25E-06 10457000 48939 53210 47186 60928 56568 50833 57388 54488 40774 48719 TRUE FALSE 52685.80747 50567.66877 48759.15769 55949.9875 54346.85609 52767.48544 49852.88666 61609.76869 44320.44882 47129.30302 1.117899143 1.072956007 1.034582618 1.187159239 1.153143641 1.119632204 1.057789602 1.307249731 0.940401109 1 15.52433673 DLIDFDDR ddPTM_A459_MK2206_30min_R2 1 DLIDFDDR 8 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 0 176.09 0.0018634 1591100 20581 24261 20934 23939 19018 21900 21400 20195 14840 24778 FALSE TRUE 22156.69718 23056.23402 21631.92911 21983.10712 18271.25776 22733.41985 18590.15429 22834.55584 16130.75638 23969.49589 0.924370595 0.961898996 0.902477433 0.917128471 0.762271257 0.948431287 0.775575522 0.95265065 0.672970197 1 14.54891195 -6.031229263 24.19305715 0.849625165 0.928978871 0.130686642 0.094402236 846.771537 655985.9891 0.025561053 0.033042193 9.31E-07 6.031229263 0.079353706 DLIDNS(ph)FNR ddPTM_A459_MK2206_30min_R1 2 DLIDNSFNR 9 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 DLIDNS(1)FNR;DLIDNS(1)FNR 103.43 0.015246 12329700 3813.3 3628.1 3405 3117.9 4090.4 3669.3 4164.2 3524.2 3153.5 2957.2 TRUE FALSE 3488.958811 3391.910031 3173.878087 3358.041198 3927.470706 3877.052595 3886.413816 3493.388291 3481.31761 3323.560262 1.049765473 1.020565226 0.954963303 1.010374699 1.181705881 1.16653597 1.169352595 1.051098225 1.047466372 1 11.6985138 -6.17518335 9.139464243 1.111711852 1.005505198 0.362040398 0.060219305 0.426060031 42.40616215 0.018715149 0.024188371 6.68E-07 6.17518335 -0.106206654 DLIHDQDEDEEEEEGQR ddPTM_A459_MK2206_30min_R1 3 DLIHDQDEDEEEEEGQR 17 0 Q9UNZ2-4;Q9UNZ2;Q9UNZ2-5;F2Z2K0;R4GNE6 Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 0 ;; 281.09 1.31E-63 95044800 12961.2 13614.7 14240.9 11811.9 13479 12299 13169.4 12102.7 11753.6 11097.3 FALSE TRUE 11858.78188 12728.38056 13274.26739 12721.65458 12942.10289 12995.35875 12290.89335 11996.88737 12975.42878 12472.1173 0.950823472 1.020546892 1.06431547 1.020007612 1.037682903 1.041952897 0.985469672 0.961896611 1.040354934 1 13.60641878 -10.18659189 8.950383684 0.999986431 1.014735984 0.012813792 0.034895071 0 0 0.035091301 0.008510891 6.51E-11 10.18659189 0.014749553 DLIHDQDEDEEEEEGQR ddPTM_A459_MK2206_30min_R2 4 DLIHDQDEDEEEEEGQR 17 0 Q9UNZ2-4;Q9UNZ2;Q9UNZ2-5;F2Z2K0;R4GNE6 Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 0 ;;; 252.47 1.39E-30 260880700 446116 497485 503929 545079 565910 491373 524868 443852 467785 441159 FALSE TRUE 480270.984 472780.6183 520729.7413 500544.3021 543689.5299 510072.5438 455952.2011 501864.9804 508472.0937 426764.018 1.125378344 1.107826805 1.220181926 1.172883095 1.273981655 1.195209817 1.068394199 1.175977728 1.191459618 1 18.70307902 -10.68264053 5.926422801 0.99999821 1.170833376 0.459392811 0.055366902 1.39E-06 1.97E-07 0.056815672 0.01377968 2.08E-11 10.68264053 0.170835166 DLISHDEMFSDIYK ddPTM_A459_MK2206_30min_R1 2 DLISHDEMFSDIYK 14 0 Q5W0H4;A0A0B4J2C3;P13693 Q5W0H4 TPT1 Translationally-controlled tumor protein 0 ; 201.48 8.18E-05 56068000 14937.5 15252.7 17388.4 14860.9 15022.7 14396.6 15276.1 15781.8 12644.7 12393.8 FALSE TRUE 13666.98719 14259.74646 16208.12385 16005.48909 14424.31405 15211.72305 14257.05924 15643.82139 13959.16181 13929.23751 0.981172672 1.023727713 1.163604529 1.149057088 1.035542257 1.092071482 1.023534794 1.123092443 1.002148309 1 13.76582867 -8.292953535 21.62809485 1.001073744 1.075431547 0.211763491 0.056203561 243.1923277 166893.3708 0.056345256 0.014563197 5.09E-09 8.292953535 0.074357803 DLISHDEMFSDIYK ddPTM_A459_MK2206_30min_R2 3 DLISHDEMFSDIYK 14 0 Q5W0H4;A0A0B4J2C3;P13693 Q5W0H4 TPT1 Translationally-controlled tumor protein 0 ;; 162.48 0.00038682 10939800 142075 164966 164675 186137 185307 173988 197308 143563 160515 172221 FALSE TRUE 152952.3712 156774.0283 170165.1823 170929.0117 178030.9161 180609.2353 171401.2226 162327.177 174476.3046 166601.4429 0.918073509 0.941012428 1.021390808 1.025975578 1.068603687 1.084079658 1.028809953 0.974344365 1.047267668 1 17.34604137 -5.231330734 2.541214531 1.035017755 0.918690181 0.659576119 0.029533497 0.190535105 2.338680078 0.008757013 0.03043315 5.87E-06 5.231330734 -0.116327574 DLISLDS(ph)SPAK ddPTM_A459_MK2206_30min_R1 1 DLISLDSSPAK 11 0 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 DLISLDS(0.9)S(0.1)PAK 179.94 5.06E-05 2924700 3782.1 3666.4 3915.4 3415.4 2877.8 2762 2964.2 2713.6 4518.4 4740.6 TRUE FALSE 3460.412534 3427.716694 3649.633557 3678.4547 2763.171132 2918.382053 2766.463626 2689.875281 4988.103849 5327.901318 0.649488857 0.643352136 0.68500397 0.690413444 0.518622806 0.547754525 0.519240778 0.504865823 0.936223018 1 12.37935165 -8.330954816 5.683387755 0.984590737 0.596267999 0.829205387 0.06783238 0.100846854 5.953521305 0.073341501 0.01928066 4.67E-09 8.330954816 -0.388322738 DLKIES(ph)DVQEPTEPEDDLDIMLGNK ddPTM_A459_MK2206_30min_R1 1 DLKIESDVQEPTEPEDDLDIMLGNK 25 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 DLKIES(0.997)DVQEPT(0.003)EPEDDLDIMLGNK 73.107 0.010986 0 396.17 500.76 372.82 411.37 374.19 221.3 348.99 382.67 444.3 270.47 TRUE FALSE 362.4736611 468.160433 347.5140171 443.0537887 359.2852199 233.8298148 325.7095139 379.3243565 490.4865749 303.9778655 1.192434391 1.540113561 1.143221453 1.457519902 1.181945334 0.769233031 1.071490891 1.247868347 1.613560165 1 8.247822466 -6.502730016 23.83069705 1.13205533 1.332666817 0.141025672 0.226314685 870.2649527 1029297.844 0.073639391 0.082341585 3.14E-07 6.502730016 0.200611487 DLLEEEEAWEASHKNDLQDTEIS(ph)PR ddPTM_A459_MK2206_30min_R1 1 DLLEEEEAWEASHKNDLQDTEISPR 25 1 Q9NS91 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 DLLEEEEAWEAS(0.03)HKNDLQDT(0.408)EIS(0.562)PR 62.999 0.0016065 7284200 998.62 984.98 1020.6 867.16 1040.2 929.41 1296.4 1064.7 1222 1333.4 TRUE FALSE 913.682125 920.857623 951.3245156 933.9488135 998.7666313 982.032391 1209.919521 1055.39144 1349.031273 1498.591659 0.609693855 0.614482016 0.634812365 0.623217678 0.666470166 0.655303521 0.80737105 0.704255515 0.900199374 1 10.54939161 -8.172501538 0.522752347 1.009990923 0.608124969 0.902057348 0.04028593 0.227667521 0.154871386 0.039772958 0.021695455 6.72E-09 8.172501538 -0.401865953 DLLHNEDR ddPTM_A459_MK2206_30min_R1 1 DLLHNEDR 8 0 Q8N684-2;Q8N684;Q8N684-3;F5H669 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 0 96.668 0.029354 4959200 4910.3 4579.3 4767.7 3164.1 3645 4332.6 5018.7 3740.5 5664.6 6406.4 FALSE TRUE 4492.6532 4281.186738 4444.081808 3407.79953 3499.811932 4577.908068 4683.91168 3707.797203 6253.455441 7200.073198 0.623973268 0.594603224 0.617227309 0.473300679 0.486080049 0.635814101 0.650536675 0.514966598 0.868526648 1 12.81379586 -8.410651045 3.660753252 0.996017589 0.575093011 0.850470502 0.061321812 0.081958521 1.891227202 0.062653516 0.016584157 3.88E-09 8.410651045 -0.420924577 DLLHNEDR ddPTM_A459_MK2206_30min_R2 1 DLLHNEDR 8 0 Q8N684-2;Q8N684;Q8N684-3;F5H669 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 0 102.62 0.022586 5614400 62424 51541 57186 58095 48310 49841 56289 51290 44173 57362 FALSE TRUE 67203.22944 48981.54889 59092.5527 53348.45266 46413.10666 51737.73418 48898.18668 57993.7791 48015.08769 55490.28264 1.211081044 0.882704981 1.064917133 0.961401711 0.836418639 0.932374674 0.881202696 1.045115944 0.865288216 1 15.75994753 -4.75372926 24.99982181 0.941553209 1.211081527 0.549444728 0.0733574 213.0939402 690894.2923 0.017852316 0.186495667 1.76E-05 4.75372926 0.269528317 DLLHNEDRHDDYFQER ddPTM_A459_MK2206_30min_R1 3 DLLHNEDRHDDYFQER 16 1 Q8N684-2;Q8N684;Q8N684-3 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 0 ;; 127.3 0.00083574 37331700 7556.5 7757.1 8638.5 7603.3 9377.2 8319.3 8568.8 7528.2 4787.75 3225.65 FALSE TRUE 6913.779994 7252.11138 8052.142688 8188.907483 9003.686267 8790.331577 7997.190987 7462.381741 5285.453746 3625.267874 1.907108725 2.000434625 2.221116609 2.258842041 2.483591994 2.424739876 2.205958639 2.058435956 1.457948469 1 11.82387189 -8.388112451 1.947970408 1.005328334 2.227574723 0.860798032 0.161702775 0.120641347 0.935853072 0.175183061 0.049987931 4.09E-09 8.388112451 1.222246389 DLLHNEDRHDDYFQER ddPTM_A459_MK2206_30min_R2 4 DLLHNEDRHDDYFQER 16 1 Q8N684-2;Q8N684;Q8N684-3 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 0 ;;; 77.42 0.011563 31783300 73655 151726 107034 131120 178499 154884 111162 98518 136105 86119 FALSE TRUE 79294.08343 144191.5075 110602.4601 120407.0766 171490.2324 160778.2192 96566.29587 111394.6409 147943.1669 83308.94408 0.951807568 1.730804646 1.327618077 1.445307919 2.058485247 1.929903457 1.159134796 1.337127029 1.775837739 1 16.34618377 -10.69935769 4.094034977 0.999806557 1.533425311 0.183281639 0.331305319 42421408.99 27716188.61 78756.04544 0.081783766 2.00E-11 10.69935769 0.533618755 DLLHPS(ph)PEEEK ddPTM_A459_MK2206_30min_R1 5 DLLHPSPEEEK 11 0 P42677 P42677 RPS27 40S ribosomal protein S27 1 DLLHPS(1)PEEEK;DLLHPS(1)PEEEK;DLLHPS(1)PEEEK;DLLHPS(1)PEEEK;DLLHPS(1)PEEEK 163.33 0.00059597 95096000 35218.9 44397.3 40783.7 31800.2 22495.9 22931.4 31982.8 28059.6 43917.1 48294.7 TRUE FALSE 32223.34761 41507.0277 38015.41607 34249.45691 21599.84067 24229.75605 29849.28577 27814.27788 48482.4397 54277.81204 0.593674402 0.76471446 0.700385934 0.631002902 0.39794973 0.446402593 0.549935317 0.512442872 0.893227599 1 15.72807495 -8.379434146 4.099427715 0.992590366 0.576296763 0.673028065 0.104627523 0.149180798 3.977388161 0.115770052 0.030542803 4.17E-09 8.379434146 -0.416293602 DLLHPS(ph)PEEEK ddPTM_A459_MK2206_30min_R2 5 DLLHPSPEEEK 11 0 P42677 P42677 RPS27 40S ribosomal protein S27 1 DLLHPS(1)PEEEK;DLLHPS(1)PEEEK;DLLHPS(1)PEEEK;DLLHPS(1)PEEEK;DLLHPS(1)PEEEK 142.91 0.0035677 64100900 494437 387574 435680 351239 341761 245762 483050 365771 267125 479271 TRUE FALSE 532291.4769 368327.6387 450205.3537 322541.6501 328341.7459 255114.6451 419624.9548 413578.5256 290359.0496 463632.4265 1.148089405 0.794438908 0.971039401 0.695683977 0.708194093 0.550251946 0.905081118 0.892039689 0.626269935 1 18.82262195 -1.885362156 1.037300814 0.770397292 200 0.350552314 0.142656827 981.15667 2.636652437 0.044392658 463018.6191 0.013020805 1.885362156 199.2296027 DLLHSEGS(ph)ENEGPVSSSSSDCR ddPTM_A459_MK2206_30min_R1 2 DLLHSEGSENEGPVSSSSSDCR 22 0 Q9NY27-2;Q9NY27-3;Q9NY27 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 DLLHSEGS(1)ENEGPVSSSSSDCR;DLLHSEGS(1)ENEGPVSSSSSDCR 145.2 3.24E-07 10075100 2660.8 2385.73 2309.8 1975.57 2695.64 2303.16 3183.1 2493.89 2403.18 3271.7 TRUE FALSE 2434.484988 2230.418543 2153.017211 2127.728744 2588.266951 2433.562929 2970.761207 2472.086183 2652.999161 3677.022896 0.662080454 0.606582718 0.585532718 0.578655288 0.703902865 0.661829691 0.807925675 0.672306443 0.721507381 1 11.84432244 -14.52287875 0.138960082 2.1896993 0.540146756 0.81300472 0.051591871 58.10714638 0.494468511 18.99556034 0.335710581 3.00E-15 14.52287875 -1.649552544 DLLHSEGS(ph)ENEGPVSSSSSDCR ddPTM_A459_MK2206_30min_R2 2 DLLHSEGSENEGPVSSSSSDCR 22 0 Q9NY27-2;Q9NY27-3;Q9NY27 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 DLLHSEGS(1)ENEGPVSSSSSDCR;DLLHSEGS(1)ENEGPVSSSSSDCR 142.01 3.81E-06 19713300 45958 44283 57805 55416 47379 47652 55874 40853 38045 52137 TRUE FALSE 49476.57982 42083.97061 59732.18985 50888.33553 45518.6624 49465.43025 48537.67668 46192.62737 41354.08533 50435.77396 0.980981869 0.834407154 1.184321864 1.008973027 0.902507463 0.980760805 0.962366052 0.915870299 0.819935575 1 15.62215978 -7.732347235 3.188539845 0.898149218 0.981341345 0.098698378 0.092936482 0.546310987 11.33942963 0.0543512 0.02623177 1.85E-08 7.732347235 0.083192126 DLLPS(ph)PAGPVPSKDPK ddPTM_A459_MK2206_30min_R2 1 DLLPSPAGPVPSKDPK 16 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 DLLPS(1)PAGPVPSKDPK 77.899 0.01488 8394100 71302 87032 86303 78697 74370 62973 91600 68924 63963 93912 TRUE FALSE 76760.93594 82710.11744 89180.29895 72267.20336 71449.86012 65369.48164 79572.80997 77932.60345 69526.38612 90847.65913 0.844941264 0.910426512 0.981646636 0.79547678 0.786479925 0.719550534 0.875892794 0.857838322 0.765307403 1 16.47116172 -5.780384372 24.99363157 0.818391607 0.912147001 0.185551627 0.078310129 336.794935 444323.6763 0.021539011 0.032005551 1.66E-06 5.780384372 0.093755393 DLLSDLQDIS(ph)DSER ddPTM_A459_MK2206_30min_R1 5 DLLSDLQDISDSER 14 0 P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;P21127-10;P21127-5;Q9UQ88-9;E7ESP2;J3KS35;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 DLLSDLQDIS(0.858)DS(0.142)ER;DLLSDLQDIS(0.959)DS(0.041)ER;DLLSDLQDIS(0.972)DS(0.028)ER;DLLSDLQDIS(0.999)DS(0.001)ER;DLLSDLQDIS(0.999)DS(0.001)ER 220.72 7.34E-09 29774900 3896.52 4300.087 4729.78 3056.99 4812.03 4044.47 4592.42 4227.65 4473.75 4091.69 TRUE FALSE 3565.100513 4020.150555 4408.735712 3292.439899 4620.356655 4273.464396 4286.068041 4190.688102 4938.812322 4598.599448 0.775257892 0.874211942 0.958712704 0.715965793 1.004731268 0.92929694 0.932037698 0.911296613 1.073981846 1 12.16697882 -6.496648181 0.354975684 1.022260349 0.789263752 0.397046173 0.079078262 2.317969134 0.542252276 0.087978743 0.208138875 3.19E-07 6.496648181 -0.232996597 DLLSDLQDIS(ph)DSER ddPTM_A459_MK2206_30min_R2 8 DLLSDLQDISDSER 14 0 P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;P21127-10;P21127-5;Q9UQ88-9;E7ESP2;J3KS35;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 DLLSDLQDIS(0.998)DS(0.002)ER;DLLSDLQDIS(0.998)DS(0.002)ER;DLLSDLQDIS(0.99)DS(0.01)ER;DLLSDLQDIS(0.999)DS(0.001)ER;DLLSDLQDIS(0.738)DS(0.262)ER;DLLSDLQDIS(0.97)DS(0.03)ER;DLLSDLQDIS(0.999)DS(0.001)ER;DLLSDLQDIS(1)DSER 140.03 0.00056578 8486570 74454.5 83356.7 78355.96 92577.5 87903.8 77225.1 87084.9 67381.97 67965.7 88915.2 TRUE FALSE 80154.79377 79217.32749 80968.3086 85013.62211 84452.25513 80163.95529 75650.54802 76189.02484 73877.23373 86013.90431 0.931881821 0.920982812 0.941339767 0.988370692 0.981844224 0.931988333 0.879515337 0.885775683 0.858898737 1 16.39228227 -7.05254321 5.42989489 0.897172001 0.952923945 0.219310088 0.040228789 0.272103672 17.94290882 0.015322934 0.012038483 8.86E-08 7.05254321 0.055751945 DLLSDLQDISDS(ph)ER ddPTM_A459_MK2206_30min_R1 1 DLLSDLQDISDSER 14 0 P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;P21127-10;P21127-5;Q9UQ88-9;E7ESP2;J3KS35;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 DLLSDLQDIS(0.469)DS(0.531)ER 274.38 8.82E-45 20087000 7526.7 7660.6 7652.8 6126.8 6907.9 6689.1 8213.6 7074.4 7912.1 8277.6 TRUE FALSE 6886.514641 7161.893548 7133.349258 6598.687198 6632.743715 7067.831061 7665.685731 7012.549267 8734.591109 9303.091581 0.740239369 0.769840164 0.766771905 0.709300466 0.712961241 0.759729279 0.823993364 0.753786976 0.938891231 1 13.18349451 -8.352866274 2.629209622 1.001577562 0.752997077 0.886236416 0.03108752 0.087085403 1.137094617 0.031897429 0.008820148 4.44E-09 8.352866274 -0.248580485 DLLSDLQDISDS(ph)ER ddPTM_A459_MK2206_30min_R2 1 DLLSDLQDISDSER 14 0 P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;P21127-10;P21127-5;Q9UQ88-9;E7ESP2;J3KS35;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 DLLSDLQDIS(0.425)DS(0.575)ER 113.43 0.0032969 3663800 54058 58826 44813 69525 48767 56931 65399 52015 48596 57002 TRUE FALSE 58196.72204 55904.78638 46307.04305 63844.5851 46852.16255 59097.5491 56812.03274 58813.53909 52822.79224 55142.02941 1.055396812 1.013832588 0.839777635 1.157820736 0.84966337 1.071733299 1.030285489 1.066582781 0.957940664 1 15.75086474 DLLVSSGSNNSLPCGS(ph)PK ddPTM_A459_MK2206_30min_R1 1 DLLVSSGSNNSLPCGSPK 18 0 Q5THK1-2;Q5THK1-4;Q5THK1;Q5THK1-3 Q5THK1-2 PRR14L Protein PRR14L 1 DLLVSSGS(0.001)NNSLPCGS(0.998)PK 149.74 0.00016208 11664000 769.93 1161.5 1019.4 747.22 757.55 716.08 772.27 937.4 911.06 748.51 TRUE FALSE 704.4434104 1085.886139 950.2059682 804.7710139 727.3751794 756.6238308 720.7532774 929.2044106 1005.767947 841.2410698 0.8373859 1.290814462 1.129528743 0.956647319 0.86464535 0.899413804 0.856773764 1.104563774 1.195576373 1 9.716375475 -5.763142196 24.9809793 0.973260733 1.106400194 0.091113725 0.143313595 89.03674992 1306239.038 0.041266381 0.064972985 1.73E-06 5.763142196 0.133139461 DLLVSSGSNNSLPCGS(ph)PK ddPTM_A459_MK2206_30min_R2 1 DLLVSSGSNNSLPCGSPK 18 0 Q5THK1-2;Q5THK1-4;Q5THK1;Q5THK1-3 Q5THK1-2 PRR14L Protein PRR14L 1 DLLVSSGSNNSLPCGS(1)PK 238.72 6.18E-25 4730600 31508 30016 35457 27095 29794 21468 35822 20544 22163 34747 TRUE FALSE 33920.27671 28525.44909 36639.11868 24881.25183 28624.13786 22284.97978 31118.52837 23229.17134 24090.69768 33613.20824 1.009135351 0.848638097 1.090021471 0.740222464 0.851574109 0.662982826 0.92578275 0.691072723 0.716703312 1 15.03674063 -5.77637527 24.99940523 0.787351107 0.969202311 0.34767749 0.114535756 241.2133477 403737.7222 0.030250578 0.045073413 1.67E-06 5.77637527 0.181851204 DLMVGDEASELR ddPTM_A459_MK2206_30min_R1 1 DLMVGDEASELR 12 0 P61160 P61160 ACTR2 Actin-related protein 2 0 140.49 0.014833 3898900 1453.2 1531 1305.6 1442 1642.6 1488.1 1708.7 1446.8 1143.1 1222.4 FALSE TRUE 1329.597709 1431.331622 1216.97951 1553.06309 1577.171764 1572.354936 1594.715741 1434.15078 1261.929336 1373.840141 0.967796521 1.041847286 0.885823229 1.130454005 1.148002389 1.144496284 1.160772417 1.043899314 0.918541611 1 10.42399843 -5.775828111 24.9999194 1.088986191 0.972824816 0.284256093 0.080497542 294.0128849 510836.6276 0.023812683 0.035501076 1.68E-06 5.775828111 -0.116161374 DLMVGDEASELR ddPTM_A459_MK2206_30min_R2 1 DLMVGDEASELR 12 0 P61160 P61160 ACTR2 Actin-related protein 2 0 143.24 0.011666 4403900 15057 20135 16644 20156 16403 21612 20822 12811 16743 16082 FALSE TRUE 16209.7755 19135.12518 17198.90265 18509.19032 15758.9358 22434.4598 18088.04639 14485.44169 18199.27588 15557.24566 1.04194379 1.229981553 1.105523628 1.189747256 1.012964386 1.442058594 1.162676658 0.931105802 1.169826348 1 13.92529904 -7.629665461 9.757381831 1.038274584 1.175312181 0.200218197 0.123947493 0.483653162 40.86008448 0.056914422 0.032795696 2.35E-08 7.629665461 0.137037597 DLNES(ph)PVK ddPTM_A459_MK2206_30min_R1 1 DLNESPVK 8 0 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 DLNES(1)PVK 106.67 0.01363 75088000 7573.2 7841.7 7743.8 6383.3 5963.6 6271.5 7685.2 6356 8261.8 7535.1 TRUE FALSE 6929.059572 7331.203905 7218.172431 6874.942872 5726.057184 6626.58691 7172.53433 6300.430162 9120.643675 8468.605075 0.818205538 0.865692028 0.85234491 0.811815265 0.676151165 0.782488598 0.846955817 0.743974965 1.076994805 1 13.04790864 -8.264146506 24.99987401 1.038497431 0.800944419 0.743380111 0.056116877 127.4152413 1176623.84 0.049703548 0.015079951 5.44E-09 8.264146506 -0.237553011 DLNESPVKS(ph)FVSISEATDCLVDFKK ddPTM_A459_MK2206_30min_R1 1 DLNESPVKSFVSISEATDCLVDFKK 25 2 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 DLNES(0.299)PVKS(0.643)FVS(0.044)IS(0.014)EATDCLVDFKK 72.399 0.00027775 3946200 1242.5 1318.1 1216.8 1717.2 1544.2 904.09 700.36 1558.2 585.16 448.65 TRUE FALSE 1136.81885 1232.29145 1134.207006 1849.459042 1482.691244 955.2787945 653.6402623 1544.576822 645.989476 504.2321491 2.254554479 2.443897027 2.249374635 3.667872119 2.940493276 1.894521791 1.296308185 3.063225588 1.281135043 1 8.977944295 -8.339953537 0.553001654 0.98311423 2.651958021 0.383278618 0.64312022 0.993376803 0.746786871 0.716091312 0.34959782 4.57E-09 8.339953537 1.668843791 DLNYCFSGMSDHR ddPTM_A459_MK2206_30min_R1 3 DLNYCFSGMSDHR 13 0 P31943;G8JLB6;E9PCY7;H0YB39;H0YBD7;H0YBG7;P55795 P31943;P55795 HNRNPH1;HNRNPH2 "Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2" 0 ;; 141.06 0.0011923 24685800 9730.9 4960.1 6374.7 4569.15 14183.2 13918.9 12604.5 8990.2 5165 4631.09 FALSE TRUE 8903.235856 4637.196588 5942.003125 4921.066725 13618.25311 14706.97609 11763.6768 8911.599629 5701.920233 5204.824392 1.710573726 0.890941987 1.141633738 0.945481798 2.616467355 2.825643092 2.260148646 1.712180654 1.095506746 1 12.34563377 -2.57401883 5.70035099 1.666341725 1.312124258 0 0.690611963 0 0 0.175691724 0 0.002666743 2.57401883 -0.354217466 DLNYCFSGMSDHR ddPTM_A459_MK2206_30min_R2 2 DLNYCFSGMSDHR 13 0 P31943;G8JLB6;E9PCY7;H0YB39;H0YBD7;H0YBG7;P55795 P31943;P55795 HNRNPH1;HNRNPH2 "Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2" 0 ; 148.85 0.00075197 23339000 30923 75845 48358 113937 112682 141732 104798 63660 92778 53109 FALSE TRUE 33290.48866 72078.64759 49970.23158 104627.9826 108257.5385 147125.7106 91037.89672 71980.58058 100847.6627 51376.05768 0.647976707 1.402961824 0.972636552 2.03651248 2.107159315 2.863701834 1.771990706 1.401053016 1.962931126 1 15.64880857 -5.760614566 24.99804701 1.940581321 1.047368536 0.394817663 0.488400905 22.06673839 668740.1691 0.137784858 0.221871389 1.74E-06 5.760614566 -0.893212785 DLPAIQES(ph)PTR ddPTM_A459_MK2206_30min_R1 1 DLPAIQESPTR 11 0 P49796-1;P49796-4;P49796-6;P49796 P49796-1 RGS3 Regulator of G-protein signaling 3 1 DLPAIQES(0.96)PT(0.04)R 162.67 0.00062825 14318000 1826.8 1949.5 1740.3 1458.9 1821.2 1823.8 2132.9 1373.6 1860.1 1874.5 TRUE FALSE 1671.421067 1822.587196 1622.173285 1571.264731 1748.657748 1927.06198 1990.618133 1361.59076 2053.464051 2106.727212 0.793373275 0.865127286 0.769996835 0.745832076 0.830035202 0.914718322 0.944886515 0.646306153 0.974717581 1 11.0407878 -6.537931166 9.247305342 0.876633181 0.795859967 0.191780983 0.095903988 0.439339775 235.6009705 0.03103335 0.03147489 2.90E-07 6.537931166 -0.080773215 DLPAIQES(ph)PTR ddPTM_A459_MK2206_30min_R2 3 DLPAIQESPTR 11 0 P49796-1;P49796-4;P49796-6;P49796 P49796-1 RGS3 Regulator of G-protein signaling 3 1 DLPAIQES(0.595)PT(0.405)R;DLPAIQES(0.914)PT(0.086)R;DLPAIQES(0.952)PT(0.048)R 148.48 0.00064819 22429000 54439 55749 49904 53836 49747 54253 57934 50604 42401 59954 TRUE FALSE 58606.8917 52980.58573 51567.77445 49437.42659 47793.68282 56317.63593 50327.19621 57218.11655 46088.96234 57997.70589 1.010503619 0.913494507 0.889134728 0.85240314 0.824061609 0.971032131 0.867744602 0.986558273 0.794668714 1 15.82370821 -9.998044657 20.82413965 1 0.90097744 0.163082807 0.067235499 0 0 0.062634195 0.015191024 1.00E-10 9.998044657 -0.09902256 DLPAIQESPT(ph)R ddPTM_A459_MK2206_30min_R1 1 DLPAIQESPTR 11 0 P49796-1;P49796-4;P49796-6;P49796 P49796-1 RGS3 Regulator of G-protein signaling 3 1 DLPAIQES(0.443)PT(0.557)R 153 0.0013291 11821000 2461.2 2103.2 2105 1678.1 2348.7 2587.2 2773.2 1923.4 2254 2226.9 TRUE FALSE 2251.862016 1966.281298 1962.118465 1807.347553 2255.146306 2733.685028 2588.204888 1906.583917 2488.311366 2502.785184 0.899742427 0.785637261 0.783973981 0.72213451 0.901054681 1.092257156 1.034129858 0.761784882 0.994216915 1 11.28931875 -6.5154407 24.61232591 0.968688504 0.797954044 0.467394652 0.089693714 280.6657832 928720.9532 0.030458795 0.03172551 3.05E-07 6.5154407 -0.170734461 DLPAIQESPT(ph)R ddPTM_A459_MK2206_30min_R2 1 DLPAIQESPTR 11 0 P49796-1;P49796-4;P49796-6;P49796 P49796-1 RGS3 Regulator of G-protein signaling 3 1 DLPAIQES(0.03)PT(0.97)R 137.62 0.0030817 11418000 18788 15651 14400 15011 15699 15309 18050 15119 14851 14966 TRUE FALSE 20226.42373 14873.7941 14880.08881 13784.55328 15082.57838 15891.59472 15680.01332 17095.10521 16142.71314 14477.66065 1.397078176 1.027361703 1.027796491 0.952125735 1.041782837 1.097663159 1.083048823 1.180791955 1.115008393 1 13.82154088 -4.757921546 24.99986178 1.061248309 1.397078648 0.734511119 0.061063472 58.57227025 416186.4927 0.017051581 0.121490964 1.75E-05 4.757921546 0.335830339 DLPDGHAAS(ph)PR ddPTM_A459_MK2206_30min_R1 2 DLPDGHAASPR 11 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 DLPDGHAAS(1)PR;DLPDGHAAS(1)PR 163.71 0.00064187 22557600 10537.6 9975.3 9995 8279.4 9662.2 8549.4 8986.6 8706.4 7407.6 7033.3 TRUE FALSE 9641.321785 9325.906157 9316.567248 8917.080823 9277.334114 9033.45964 8387.120311 8630.280863 8177.646528 7904.638303 1.219704358 1.179801757 1.17862031 1.128082081 1.173657005 1.142804932 1.061037835 1.091799591 1.034537725 1 12.94848373 -7.37647882 0.400573582 0.991901922 1.212245295 0.89124811 0.022459508 0.370128061 0.145459823 0.025607118 0.027893818 4.20E-08 7.37647882 0.220343372 DLPDGHAAS(ph)PR ddPTM_A459_MK2206_30min_R2 1 DLPDGHAASPR 11 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 DLPDGHAAS(1)PR 135.04 0.0015303 26769000 37746 42799 32184 34872 36730 35803 27899 29981 32169 26714 TRUE FALSE 40635.86278 40673.6639 33256.9985 32022.84605 35287.79565 37165.50825 24235.82779 33899.61964 34967.00147 25842.32437 1.572453863 1.573916623 1.286919784 1.239162762 1.365503936 1.438164297 0.937834672 1.311786787 1.353090418 1 14.65744822 -1.522878745 0.240126135 1.129406774 3.903293468 0.467385092 0.145963423 48.65396888 0.650188297 0.205326728 53.79102401 0.03 1.522878745 2.773886694 DLPEHAVLK ddPTM_A459_MK2206_30min_R2 2 DLPEHAVLK 9 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;A0A1X7SBS1;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7;A0A1W2PQD4 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 131.11 0.0051749 20863600 202319 236220 209773 242710 230000 222090 245900 183957 203580 212882 FALSE TRUE 217808.6982 224489.6583 216766.7271 222879.8166 220969.0443 230541.7906 213613.0346 208000.8115 221287.0204 205935.6778 1.057654024 1.090095999 1.052594332 1.082278792 1.073000302 1.119484458 1.037280363 1.010028052 1.074544357 1 17.65183427 -7.489895615 22.96235918 1.030102564 1.078335771 0.478890797 0.025000223 201.9790429 140615.2396 0.009972795 0.006715197 3.24E-08 7.489895615 0.048233207 DLPEWEPR ddPTM_A459_MK2206_30min_R1 1 DLPEWEPR 8 0 O94964-2;H0YDM2;O94964;X6R3R3;O94964-4 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 0 97.798 0.03197 0 2970 2843.6 2595.4 2503.9 2891.4 2738.9 2994 2889.6 2279.5 2043.8 FALSE TRUE 2717.385904 2658.481123 2419.231479 2696.750812 2776.229415 2893.974151 2794.275723 2864.336532 2516.462182 2297.001374 1.183014488 1.15737028 1.0532129 1.174030996 1.208632022 1.259892216 1.216488486 1.246989473 1.095542306 1 11.165536 -4.356953009 15.83502512 1.168708871 7.24995351 0 0.081013111 2963760.157 143048.727 0.020272638 655912888.6 4.40E-05 4.356953009 6.081244639 DLPPFGINS(ph)PQALK ddPTM_A459_MK2206_30min_R2 2 DLPPFGINSPQALK 14 0 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8H7 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 DLPPFGINS(1)PQALK;DLPPFGINS(1)PQALK 147.07 0.00048572 6668700 32872 31288 33719 50636 41089 49423 45772 28341 42053 41724 TRUE FALSE 35388.70559 29734.28342 34843.17463 46498.87682 39475.6394 51303.8269 39762.08142 32045.26601 45710.69393 40362.5493 0.876770824 0.736680015 0.863255053 1.152030227 0.978026415 1.271074989 0.985123143 0.79393563 1.132502647 1 15.30072968 -5.604494489 6.251046184 1.039608699 0.805034044 0.400483201 0.123911009 0.203804334 12.30983732 0.034511588 0.06047131 2.49E-06 5.604494489 -0.234574655 DLPPFGINS(ph)PQALKK ddPTM_A459_MK2206_30min_R2 1 DLPPFGINSPQALKK 15 1 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8H7 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 DLPPFGINS(1)PQALKK 87.49 0.0095506 9942700 22718 28114 20573 24130 31255 26518 26052 31533 17154 30994 TRUE FALSE 24457.30755 26717.89964 21258.89355 22158.50181 30027.77166 27527.16107 22631.34111 35654.47137 18646.02391 29982.66832 0.815714842 0.89111147 0.709039413 0.739043689 1.001504314 0.918102444 0.75481411 1.189169389 0.621893412 1 14.87184116 -6.251670077 24.89601315 0.915926849 0.790348508 0.145722011 0.14883245 1287.664812 3281472.564 0.041758161 0.053235782 5.60E-07 6.251670077 -0.125578341 DLPS(ph)PDSR ddPTM_A459_MK2206_30min_R2 1 DLPSPDSR 8 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 DLPS(1)PDSR 99.788 0.018368 16787000 44720 50002 53636 56320 62871 56609 51822 38053 50983 44480 TRUE FALSE 48143.79758 47518.97339 55424.19747 51718.47584 60402.36864 58763.29516 45017.70915 43026.65776 55417.40918 43028.62124 1.118878463 1.104357333 1.288077467 1.201955218 1.403771882 1.365679249 1.046227089 0.999954368 1.287919705 1 15.39300899 -7.280374706 24.75382862 1.083521475 1.247560039 0.320350035 0.116734971 980.0666082 1281218.443 0.051565471 0.034830863 5.24E-08 7.280374706 0.164038564 DLPTIPGVT(ph)SPSSDEPPMEASQSHLR ddPTM_A459_MK2206_30min_R1 1 DLPTIPGVTSPSSDEPPMEASQSHLR 26 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPT(0.016)IPGVT(0.477)S(0.477)PS(0.021)S(0.01)DEPPMEASQSHLR 69.845 0.0012371 35215000 6773 5440.4 5747.9 5061.6 6014.2 5693.4 7503.1 5245.9 5341.5 6620.2 TRUE FALSE 6196.920784 5086.228971 5357.748563 5451.445309 5774.641679 6015.755388 7002.581889 5200.035649 5896.76804 7440.360356 0.83287912 0.683599816 0.720092617 0.732685656 0.776123924 0.808530111 0.941161658 0.698895672 0.792537963 1 12.86115678 -6.661022717 2.561916292 0.836810734 0.737570264 0.26010188 0.084444074 0.43986484 5.876633226 0.030555557 0.030050582 2.18E-07 6.661022717 -0.09924047 DLPTIPGVT(ph)SPSSDEPPMEASQSHLR ddPTM_A459_MK2206_30min_R2 1 DLPTIPGVTSPSSDEPPMEASQSHLR 26 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPT(0.007)IPGVT(0.277)S(0.239)PS(0.239)S(0.239)DEPPMEASQSHLR 66.479 0.0026992 7595900 44220 43204 38262 51171 44456 47624 58847 34094 35021 53479 TRUE FALSE 47605.5172 41058.55218 39537.63598 46990.16561 42710.43407 49436.36469 51120.31821 38550.20286 38067.06328 51733.98461 0.920198155 0.79364759 0.764248806 0.908303622 0.825577894 0.955587803 0.988138041 0.745162066 0.735823145 1 15.65882469 -4.343272135 7.848230442 0.854366118 2.61113743 0.036748922 0.095328552 12304.50982 14570.22317 0.024454688 365802.1916 4.54E-05 4.343272135 1.756771312 DLPTIPGVTS(ph)PSSDEPPMEASQSHLR ddPTM_A459_MK2206_30min_R1 3 DLPTIPGVTSPSSDEPPMEASQSHLR 26 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVT(0.137)S(0.851)PS(0.011)S(0.001)DEPPMEASQSHLR;DLPT(0.021)IPGVT(0.326)S(0.564)PS(0.071)S(0.019)DEPPMEASQSHLR;DLPTIPGVT(0.079)S(0.895)PS(0.019)S(0.006)DEPPMEASQSHLR 104.67 2.50E-08 50160100 5150.61 3621.71 4860.19 3218.89 4698.81 5220.88 5612.44 4085.42 4479.79 5756.01 TRUE FALSE 4712.523573 3385.936021 4530.293844 3466.809466 4511.646448 5516.481714 5238.044368 4049.701604 4945.480202 6469.107974 0.728465747 0.523400759 0.700296526 0.535902242 0.697413997 0.852742254 0.809701181 0.626006185 0.764476373 1 12.65935108 -6.532547641 7.058665321 0.786310582 0.619870687 0.408045984 0.105561697 0.154699687 41.71009587 0.033385031 0.034407066 2.93E-07 6.532547641 -0.166439895 DLPTIPGVTS(ph)PSSDEPPMEASQSHLR ddPTM_A459_MK2206_30min_R2 4 DLPTIPGVTSPSSDEPPMEASQSHLR 26 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVT(0.185)S(0.766)PS(0.046)S(0.003)DEPPMEASQSHLR;DLPT(0.002)IPGVT(0.146)S(0.638)PS(0.168)S(0.045)DEPPMEASQSHLR;DLPT(0.001)IPGVT(0.44)S(0.534)PS(0.018)S(0.007)DEPPMEASQSHLR;DLPT(0.14)IPGVT(0.14)S(0.585)PS(0.063)S(0.073)DEPPMEASQSHLR 128.09 4.43E-09 40325400 132042 140020 135363 182809 147835 158706 181763 132085 122435 166390 TRUE FALSE 142151.237 133066.8104 139875.9349 167872.9199 142030.2551 164745.668 157897.2998 149348.963 133084.175 160960.7079 0.883142469 0.826703685 0.869006708 1.042943474 0.882390845 1.023514808 0.980967975 0.927859755 0.826811566 1 17.29634903 -5.552103684 24.79459428 0.953082694 0.853156081 0.328566414 0.062602963 201.7605947 171173.7884 0.016810995 0.029118059 2.80E-06 5.552103684 -0.099926613 DLPTIPGVTSPS(ph)SDEPPMEASQSHLR ddPTM_A459_MK2206_30min_R2 1 DLPTIPGVTSPSSDEPPMEASQSHLR 26 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPT(0.001)IPGVT(0.25)S(0.25)PS(0.352)S(0.146)DEPPMEAS(0.001)QSHLR 58.802 0.0048415 19236000 45273 37563 42718 58541 50807 52503 55872 43978 33756 53450 TRUE FALSE 48739.13569 35697.67604 44142.1968 53758.01304 48812.0619 54501.03846 48535.93929 49726.0756 36692.03586 51705.93088 0.942621762 0.690398092 0.853716316 1.039687559 0.944032165 1.054057775 0.938691915 0.96170932 0.709629152 1 15.65804215 -5.545510307 13.52540961 0.951372928 0.805398331 0.219082175 0.105605483 1.751748284 1045.236122 0.028029909 0.048693156 2.85E-06 5.545510307 -0.145974597 DLPTIPGVTSPSSDEPPMEAS(ph)QSHLRNSPEDK ddPTM_A459_MK2206_30min_R1 4 DLPTIPGVTSPSSDEPPMEASQSHLRNSPEDK 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVTSPSSDEPPMEAS(0.744)QS(0.146)HLRNS(0.109)PEDK;DLPTIPGVTSPSS(0.001)DEPPMEAS(0.676)QS(0.162)HLRNS(0.162)PEDK;DLPTIPGVTSPS(0.003)S(0.003)DEPPMEAS(0.881)QS(0.079)HLRNS(0.034)PEDK;DLPTIPGVTSPS(0.001)S(0.001)DEPPMEAS(0.721)QS(0.197)HLRNS(0.08)PEDK 85.849 1.84E-07 41777700 18461.9 13676.7 16309.1 12728.3 16346.6 14927.4 14887.3 13619 13262.7 11193.8 TRUE FALSE 16891.61846 12786.34434 15202.08373 13708.63587 15695.48031 15772.57649 13894.19538 13499.93052 14641.40513 12580.57245 1.342674868 1.016356322 1.208377742 1.089667098 1.247596671 1.253724864 1.104416785 1.073077602 1.163810723 1 13.61890995 -8.814200495 0.57863479 0.998537919 1.179870133 0.253551703 0.091842268 1.904393674 1.308009696 0.106262985 0.040623981 1.53E-09 8.814200495 0.181332214 DLPTIPGVTSPSSDEPPMEAS(ph)QSHLRNSPEDK ddPTM_A459_MK2206_30min_R2 6 DLPTIPGVTSPSSDEPPMEASQSHLRNSPEDK 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVTSPSSDEPPMEAS(0.495)QS(0.495)HLRNS(0.011)PEDK;DLPTIPGVTSPSSDEPPMEAS(0.346)QS(0.346)HLRNS(0.307)PEDK;DLPTIPGVTS(0.001)PS(0.006)S(0.006)DEPPMEAS(0.672)QS(0.177)HLRNS(0.139)PEDK;DLPTIPGVT(0.007)S(0.008)PS(0.044)S(0.044)DEPPMEAS(0.571)QS(0.145)HLRNS(0.179)PEDK;DLPTIPGVTSPS(0.002)S(0.002)DEPPMEAS(0.902)QS(0.082)HLRNS(0.013)PEDK;DLPTIPGVTSPSSDEPPMEAS(0.57)QS(0.392)HLRNS(0.038)PEDK 81.799 3.11E-06 55671000 132557 202751 173833 216423 234140 182125 235074 168170 151577 197147 TRUE FALSE 142705.6658 192682.6802 179628.5055 198740.5486 224946.4871 189055.8945 204208.5014 190150.3964 164760.8935 190714.1095 0.7482701 1.010322103 0.941873183 1.042086236 1.179495779 0.991305231 1.070757176 0.997044198 0.863915595 1 17.54105206 -4.258745552 1.662891029 1.020983472 3.16E-10 0.493032051 0.078661824 4.370479604 3.515101949 0.022314403 11.06487264 5.51E-05 4.258745552 -1.020983471 DLPTIPGVTSPSSDEPPMEAS(ph)QSHLRNSPEDKR ddPTM_A459_MK2206_30min_R1 1 DLPTIPGVTSPSSDEPPMEASQSHLRNSPEDKR 33 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVTSPS(0.009)S(0.009)DEPPMEAS(0.34)QS(0.34)HLRNS(0.301)PEDKR 50.229 0.0036038 11531000 3162.7 2171 2614.1 1973.6 2892.5 2488.3 2653.2 2271.6 1578.6 1260.8 TRUE FALSE 2893.695757 2029.667505 2436.662175 2125.607014 2777.2856 2629.185396 2476.209869 2251.739641 1742.701119 1416.997423 2.042131983 1.432372052 1.719595348 1.50007825 1.959979288 1.85546237 1.74750485 1.589092263 1.229854826 1 10.46862142 -8.317388743 1.958614129 1.005831138 1.740206543 0.680301095 0.175281672 0.186334663 1.369965332 0.164149692 0.047440838 4.82E-09 8.317388743 0.734375405 DLPTIPGVTSPSSDEPPMEAS(ph)QSHLRNSPEDKR ddPTM_A459_MK2206_30min_R2 3 DLPTIPGVTSPSSDEPPMEASQSHLRNSPEDKR 33 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVTSPSSDEPPMEAS(0.37)QS(0.37)HLRNS(0.259)PEDKR;DLPTIPGVTSPS(0.003)S(0.003)DEPPMEAS(0.349)QS(0.296)HLRNS(0.349)PEDKR;DLPTIPGVTSPSS(0.001)DEPPMEAS(0.428)QS(0.428)HLRNS(0.143)PEDKR 64.583 8.05E-05 46850200 103849 196086 159100 230101 219371 187937 198762 141791 161183 154163 TRUE FALSE 111799.7593 186348.6544 164404.3146 211301.0122 210757.3923 195089.0742 172664.3106 160323.5705 175202.406 149132.6739 0.74966643 1.249549475 1.10240305 1.41686598 1.41322077 1.308157824 1.157789947 1.075039871 1.17480899 1 17.18623685 -7.52461649 6.070973551 1.09695197 1.223786827 0.07716696 0.183424408 0.420313062 64.99956951 0.08758579 0.052897887 2.99E-08 7.52461649 0.126834857 DLPTIPGVTSPSSDEPPMEASQS(ph)HLRNSPEDK ddPTM_A459_MK2206_30min_R1 3 DLPTIPGVTSPSSDEPPMEASQSHLRNSPEDK 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVTSPSSDEPPMEAS(0.004)QS(0.844)HLRNS(0.152)PEDK;DLPTIPGVTSPSSDEPPMEAS(0.178)QS(0.56)HLRNS(0.261)PEDK;DLPTIPGVTSPSSDEPPMEAS(0.041)QS(0.479)HLRNS(0.479)PEDK 113.13 8.05E-13 73817000 17069.3 12861.6 15145.6 11462.3 13648.7 13659.9 14891.1 12434.9 11238.2 9662.6 TRUE FALSE 15617.4664 12024.3075 14117.55887 12345.12833 13105.04338 14433.31173 13897.74189 12326.18298 12406.45111 10859.67584 1.438115339 1.107243686 1.299998184 1.136786081 1.20676193 1.329073901 1.279756606 1.135041521 1.142432914 1 13.40669342 -8.412370388 1.285770205 1.00671883 1.247251864 0.41892571 0.093152366 0.425003247 1.504422786 0.084712639 0.026293431 3.87E-09 8.412370388 0.240533033 DLPTIPGVTSPSSDEPPMEASQS(ph)HLRNSPEDKR ddPTM_A459_MK2206_30min_R1 1 DLPTIPGVTSPSSDEPPMEASQSHLRNSPEDKR 33 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVTSPSSDEPPMEAS(0.109)QS(0.445)HLRNS(0.445)PEDKR 68.942 4.62E-05 4881100 1904.8 1258.1 1907.4 1686.3 2130.4 1920.5 1812.9 1971.7 1235.5 1175.8 TRUE FALSE 1742.786757 1176.197461 1777.931002 1816.179118 2045.541657 2029.23705 1691.964749 1954.461635 1363.934646 1321.466981 1.318827321 0.890069505 1.345422192 1.374365871 1.547932477 1.535594214 1.28036854 1.479009058 1.032136759 1 10.36792466 -3.729476609 12.8273056 1.301776102 1.253593803 0 0.220878969 0 0 0.051429431 0 0.000186433 3.729476609 -0.048182299 DLPTIPGVTSPSSDEPPMEASQSHLRNS(ph)PEDK ddPTM_A459_MK2206_30min_R1 1 DLPTIPGVTSPSSDEPPMEASQSHLRNSPEDK 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVTSPSSDEPPMEAS(0.001)QS(0.184)HLRNS(0.814)PEDK 79.663 4.03E-06 9901800 2797.9 2260.4 2558.5 1849.4 2354.9 2242.9 2641.2 2477.9 1960.3 1537.6 TRUE FALSE 2559.923913 2113.247549 2384.836148 1991.841108 2261.099346 2369.89106 2465.010367 2456.235982 2164.0802 1728.089496 1.481360727 1.222880848 1.380042037 1.15262613 1.3084388 1.371393707 1.426436751 1.421359245 1.252296368 1 10.75496222 -8.577350774 8.565763681 1.000000314 1.338451086 0.555896833 0.09308179 1.496471706 235.4529642 0.091027759 0.023521566 2.65E-09 8.577350774 0.338450772 DLPTIPGVTSPSSDEPPMEASQSHLRNS(ph)PEDK ddPTM_A459_MK2206_30min_R2 3 DLPTIPGVTSPSSDEPPMEASQSHLRNSPEDK 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVTSPSS(0.001)DEPPMEAS(0.053)QS(0.194)HLRNS(0.751)PEDK;DLPTIPGVTSPSSDEPPMEAS(0.074)QS(0.074)HLRNS(0.852)PEDK;DLPTIPGVTSPSSDEPPMEAS(0.311)QS(0.311)HLRNS(0.377)PEDK 88.829 8.76E-08 31487700 85059 121706 114891 140782 141117 107505 144011 109748 98273 122577 TRUE FALSE 91571.18244 115662.257 118721.4086 129279.6603 135576.0375 111596.1781 125102.1827 124092.4404 106820.6079 118577.3225 0.772248694 0.975416332 1.001215123 1.090256193 1.143355531 0.941125805 1.055026206 1.046510731 0.900851914 1 16.8554686 -4.662667418 2.03321011 1.029088585 0.637765148 0.560857794 0.06597346 0.807821846 2.806590212 0.017841865 0.657821382 2.17E-05 4.662667418 -0.391323436 DLPTIPGVTSPSSDEPPMEASQSHLRNS(ph)PEDKR ddPTM_A459_MK2206_30min_R1 4 DLPTIPGVTSPSSDEPPMEASQSHLRNSPEDKR 33 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVTSPSSDEPPMEAS(0.006)QS(0.017)HLRNS(0.976)PEDKR;DLPTIPGVTSPS(0.001)S(0.001)DEPPMEAS(0.099)QS(0.073)HLRNS(0.825)PEDKR;DLPTIPGVTSPSSDEPPMEAS(0.096)QS(0.096)HLRNS(0.808)PEDKR;DLPTIPGVT(0.001)S(0.001)PS(0.001)S(0.001)DEPPMEAS(0.039)QS(0.196)HLRNS(0.762)PEDKR 80.56 1.95E-06 35226500 9603.25 7119.43 7956.59 6648.92 9127.95 7931.5 7720.57 7532.46 5262.18 4691.33 TRUE FALSE 8786.443159 6655.953813 7416.518839 7161.02097 8764.364423 8380.574676 7205.544862 7466.604496 5809.202442 5272.527378 1.666457569 1.262383926 1.406634486 1.358176157 1.662270064 1.589479594 1.366620663 1.41613385 1.101787061 1 12.36427897 -8.298972157 2.015107211 0.993580255 1.470733125 0.639645725 0.126466203 0.20957112 1.602905158 0.122147657 0.035328237 5.02E-09 8.298972157 0.47715287 DLPTIPGVTSPSSDEPPMEASQSHLRNS(ph)PEDKR ddPTM_A459_MK2206_30min_R2 5 DLPTIPGVTSPSSDEPPMEASQSHLRNSPEDKR 33 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVTSPSSDEPPMEAS(0.015)QS(0.033)HLRNS(0.951)PEDKR;DLPTIPGVTSPS(0.001)S(0.001)DEPPMEAS(0.024)QS(0.065)HLRNS(0.908)PEDKR;DLPTIPGVTSPS(0.001)S(0.001)DEPPMEAS(0.069)QS(0.168)HLRNS(0.76)PEDKR;DLPTIPGVTSPSSDEPPMEAS(0.093)QS(0.243)HLRNS(0.664)PEDKR;DLPTIPGVTSPSSDEPPMEAS(0.043)QS(0.03)HLRNS(0.927)PEDKR 82.339 1.02E-06 64919900 139918 276707 206822 294655 306033 256216 285025 199862 219524 214347 TRUE FALSE 150630.2297 262966.1327 213717.3423 270580.7439 294016.6067 265966.4794 247600.8751 225984.6496 238617.8007 207352.8749 0.726443893 1.268205868 1.030693895 1.304928827 1.417952883 1.28267563 1.194103893 1.089855396 1.15078125 1 17.66172852 -4.756765355 24.99967813 1.204306371 0.726443172 0.558840912 0.12407461 110.1060493 588846.7688 0.032100738 0.252535681 1.75E-05 4.756765355 -0.477863199 DLQAALTPGALTAAAAGTGT(ph)QGPR ddPTM_A459_MK2206_30min_R1 2 DLQAALTPGALTAAAAGTGTQGPR 24 0 P55042 P55042 RRAD GTP-binding protein RAD 1 DLQAALTPGALT(0.002)AAAAGT(0.002)GT(0.996)QGPR;DLQAALTPGALT(0.002)AAAAGT(0.003)GT(0.995)QGPR 88.768 0.00016742 20328000 6541 6852.7 6647.6 5585.2 7067.7 6367.7 6357.9 5800.3 5680.1 5212.9 TRUE FALSE 5984.653602 6406.587984 6196.379433 6015.373072 6786.178543 6728.233671 5933.776092 5749.588589 6270.566721 5858.713407 1.02149622 1.093514487 1.057634843 1.026739602 1.158305258 1.148414883 1.012812145 0.981373928 1.07029757 1 12.51636816 -7.312533882 24.53630191 1.014568662 1.08429593 0.33596551 0.04697221 363.756799 174679.7774 0.020667652 0.013934155 4.87E-08 7.312533882 0.069727268 DLQEQDADAGS(ph)ER ddPTM_A459_MK2206_30min_R1 3 DLQEQDADAGSER 13 0 Q6P158;A0A087WW12;A0A087WZ11;Q6P158-3;Q6P158-2 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 1 DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER 262.24 7.25E-30 25180700 4278.45 4229.99 4394.16 3024.4 4211.07 4085.91 4895.18 3727.64 4304.81 4137.39 TRUE FALSE 3914.54536 3954.616882 4095.896662 3257.339812 4043.334165 4317.250693 4568.631474 3695.049636 4752.310404 4649.961109 0.841844753 0.850462356 0.880845359 0.700509044 0.869541502 0.928448775 0.98250961 0.794640977 1.022010785 1 12.18300293 -6.624031401 4.166177502 0.934663713 0.821116882 0.397096104 0.07319539 0.252075155 7.995842767 0.024375093 0.024353788 2.38E-07 6.624031401 -0.113546831 DLQEQDADAGS(ph)ER ddPTM_A459_MK2206_30min_R2 5 DLQEQDADAGSER 13 0 Q6P158;A0A087WW12;A0A087WZ11;Q6P158-3;Q6P158-2 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 1 DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER 166.79 1.48E-06 147658800 120280.2 130597 120426.7 120291.6 122998.5 136567.6 127127.4 106338.1 100240.7 127558.7 TRUE FALSE 129488.9446 124111.7429 124441.6661 110463.3915 118168.9609 141764.7757 110435.4197 120236.8548 108959.4549 123396.4701 1.049373167 1.005796542 1.008470226 0.895190855 0.957636477 1.148856006 0.894964172 0.974394606 0.883003013 1 16.9129416 DLQS(ph)PDFTTGFHSDK ddPTM_A459_MK2206_30min_R1 2 DLQSPDFTTGFHSDK 15 0 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 DLQS(0.862)PDFT(0.111)T(0.026)GFHSDK;DLQS(0.852)PDFT(0.112)T(0.036)GFHSDK 212.72 6.92E-07 14564100 2952.8 2735.01 2843.58 1872.97 2109.17 2215.17 3412 2217.8 3314 3478 TRUE FALSE 2701.648854 2556.960352 2650.565712 2017.226474 2025.157293 2340.591011 3184.391706 2198.410008 3658.502159 3908.880898 0.691156606 0.65414128 0.678088123 0.516062404 0.518091327 0.598788009 0.814655598 0.562414171 0.935946184 1 11.93253991 -8.339731517 4.867461003 0.990540538 0.629415402 0.715918516 0.085525261 0.123643004 5.070013799 0.085638573 0.022620485 4.57E-09 8.339731517 -0.361125136 DLQS(ph)PDFTTGFHSDK ddPTM_A459_MK2206_30min_R2 4 DLQSPDFTTGFHSDK 15 0 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 DLQS(0.998)PDFT(0.002)T(0.001)GFHSDK;DLQS(0.798)PDFT(0.157)T(0.045)GFHSDK;DLQS(0.995)PDFT(0.005)TGFHSDK;DLQS(0.999)PDFTTGFHSDK 166.67 7.80E-05 40993600 258020 207587 234400 243065 202835 186765 285844 220103 167507 286705 TRUE FALSE 277774.2096 197278.5314 242214.779 223205.812 194870.6787 193872.4729 248312.3394 248871.2178 182076.4561 277349.8393 1.00153009 0.711298524 0.87331862 0.804780751 0.70261688 0.699017794 0.895303708 0.897318774 0.656486611 1 18.08134736 -10.04893892 12.25454086 0.999999986 0.803196182 0.233769219 0.106083493 0 0 0.099679079 0.024175728 8.93E-11 10.04893892 -0.196803804 DLQS(ph)PDFTTGFHSDKIEAK ddPTM_A459_MK2206_30min_R2 1 DLQSPDFTTGFHSDKIEAK 19 1 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 DLQS(0.996)PDFT(0.003)T(0.001)GFHSDKIEAK 75.797 0.0038859 29026000 35844 42059 41339 43789 37067 31401 42301 36125 34967 39871 TRUE FALSE 38588.2442 39970.41122 42717.22163 40211.29863 35611.56333 32595.98706 36746.82789 40846.66154 38008.36645 38570.01254 1.00047269 1.036307965 1.107524183 1.042553424 0.923296649 0.845112172 0.952730515 1.0590264 0.985438271 1 15.23519199 -6.199660304 7.542849445 0.957756661 1.050779551 0.34908458 0.057202134 0.359959365 39.29458368 0.018999635 0.024540944 6.31E-07 6.199660304 0.09302289 DLQSPDFT(ph)TGFHSDKIEAK ddPTM_A459_MK2206_30min_R1 1 DLQSPDFTTGFHSDKIEAK 19 1 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 DLQS(0.023)PDFT(0.949)T(0.028)GFHSDKIEAK 108.71 0.0010069 101480000 4740.5 4786.7 5439.7 4035.5 4559.2 3676.9 4772.3 4807.1 3681.3 3174.2 TRUE FALSE 4337.295582 4475.08496 5070.46832 4346.314909 4377.59741 3885.0829 4453.948575 4765.072032 4063.984309 3567.44386 1.215799253 1.254423373 1.42131692 1.218327486 1.22709637 1.089038273 1.248498575 1.335710447 1.139186619 1 11.80067501 -14.39248245 0.191813076 6.95E-13 1.28592108 0.440334829 0.084576238 131.8050126 1.348492 50.35220661 0.237781361 4.05E-15 14.39248245 1.28592108 DLQSPDFT(ph)TGFHSDKIEAK ddPTM_A459_MK2206_30min_R2 3 DLQSPDFTTGFHSDKIEAK 19 1 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 DLQS(0.042)PDFT(0.954)T(0.004)GFHSDKIEAK;DLQS(0.008)PDFT(0.985)T(0.008)GFHSDKIEAK;DLQS(0.1)PDFT(0.84)T(0.06)GFHSDKIEAK 132.25 0.00034716 87368000 143156 195326 180780 201042 222808 156197 207440 174827 173986 195526 TRUE FALSE 154116.1334 185626.3949 186807.115 184616.2255 214059.4384 162141.1863 180202.8788 197677.4892 189118.9878 189146.0026 0.814799844 0.981392111 0.987634485 0.976051426 1.13171537 0.857227666 0.95271841 1.045105297 0.999857175 1 17.52914076 -4.759532744 4.785825528 0.992879833 0.801632933 0.401986994 0.065136918 0.197814659 11.01046589 0.016328942 0.129203026 1.74E-05 4.759532744 -0.1912469 DLRS(ph)PLTATPTFVTDSESTR ddPTM_A459_MK2206_30min_R1 2 DLRSPLTATPTFVTDSESTR 20 1 A0A087WUK4;P13056-2;P13056-3;P13056 A0A087WUK4 NR2C1 Nuclear receptor subfamily 2 group C member 1 1 DLRS(0.959)PLT(0.04)AT(0.002)PTFVTDSESTR;DLRS(0.998)PLT(0.002)ATPTFVTDSESTR 95.223 0.00058722 14149700 1939.11 1353.55 1537.95 1431.64 1912.85 2095.9 2012.3 2025.17 1319.93 1498.01 TRUE FALSE 1774.178512 1265.433649 1433.558239 1541.905161 1836.657134 2214.568047 1878.063139 2007.464152 1457.141447 1683.594788 1.053803756 0.751626019 0.851486503 0.915841016 1.090914005 1.315380674 1.115507812 1.192367763 0.865494154 1 10.71732923 -6.238608314 3.891406619 1.119913746 0.87524407 0.361723109 0.130684206 0.21807171 7.477545891 0.040216475 0.050543106 5.77E-07 6.238608314 -0.244669676 DLRS(ph)PLTATPTFVTDSESTR ddPTM_A459_MK2206_30min_R2 1 DLRSPLTATPTFVTDSESTR 20 1 A0A087WUK4;P13056-2;P13056-3;P13056 A0A087WUK4 NR2C1 Nuclear receptor subfamily 2 group C member 1 1 DLRS(0.955)PLT(0.044)AT(0.001)PTFVTDSESTR 90.755 0.00090405 5016000 17458 21514 20330 21082 23501 29496 17108 11150 21857 15974 TRUE FALSE 18794.5979 20445.64604 21007.79205 19359.53316 22578.23266 30618.49095 14861.69905 12607.34328 23758.08235 15452.76969 1.216260792 1.323105596 1.359483929 1.252819627 1.461112352 1.981424144 0.961749858 0.815863016 1.53746434 1 13.91557782 DLRSS(ph)SPRSGT(ph)PGRMGR ddPTM_A459_MK2206_30min_R1 1 DLRSSSPRSGTPGRMGR 17 3 K7EJS6 K7EJS6 MAP4K1 2 DLRS(0.305)S(0.389)S(0.305)PRS(0.344)GT(0.656)PGRMGR 78.848 0.01813 4197600 1034.7 826.91 961.2 744.17 1139.7 1059.7 1210.2 942.83 987.95 935.13 TRUE FALSE 946.6933316 773.0780087 895.9564221 801.4861023 1094.303336 1119.699298 1129.469766 934.5869367 1090.650938 1050.980964 0.90077115 0.735577556 0.852495385 0.76260763 1.041220891 1.065384946 1.074681469 0.889252012 1.037745663 1 10.03752082 -6.265484976 24.99620756 1.017708674 0.810173433 0.710721127 0.064120274 187.9801116 1161455.937 0.019578734 0.023022853 5.43E-07 6.265484976 -0.207535242 DLS(ph)LEVDR ddPTM_A459_MK2206_30min_R1 2 DLSLEVDR 8 0 E7EMW7;O95071-2;O95071;E5RFK7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 DLS(1)LEVDR;DLS(1)LEVDR 99.973 0.018218 4681000 2734.5 2993.9 2578.3 2104.35 2292.5 2177.7 2838.2 2005.37 2841.7 4216.8 TRUE FALSE 2501.916416 2798.996566 2403.29218 2266.427402 2201.184871 2300.999492 2648.868857 1987.837262 3137.104884 4739.209019 0.527918563 0.590604161 0.50710829 0.478229045 0.4644625 0.485523952 0.558926362 0.419444944 0.661946935 1 12.21043058 -8.602869212 4.165104416 0.999890696 0.50691329 0.915050839 0.045990502 0.102928337 4.506172111 0.045467209 0.011891222 2.50E-09 8.602869212 -0.492977405 DLS(ph)LEVDR ddPTM_A459_MK2206_30min_R2 2 DLSLEVDR 8 0 E7EMW7;O95071-2;O95071;E5RFK7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 DLS(1)LEVDR;DLS(1)LEVDR 108.47 0.012862 3496700 23048 21205.7 24205 21041 16891.9 17867.1 23883 19170 15092.2 21494.4 TRUE FALSE 24812.5726 20152.65577 25011.98262 19321.88299 16228.63913 18547.04501 20747.13341 21675.58482 16404.89228 20793.03949 1.193311474 0.969202015 1.202901703 0.929247646 0.780484216 0.89198335 0.997792238 1.042444268 0.788960762 1 14.34381304 -5.830235991 8.811708233 0.916359121 1.1062271 0.46051264 0.100318376 0.271578978 31.76376628 0.028338045 0.042183117 1.48E-06 5.830235991 0.189867979 DLS(ph)LEVDRDR ddPTM_A459_MK2206_30min_R1 1 DLSLEVDRDR 10 1 E7EMW7;O95071-2;O95071;E5RFK7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 DLS(1)LEVDRDR 115.91 0.030848 7172500 1603.4 1754.1 1670.5 1278.2 1625.9 1240.7 2095.3 1646.2 1608.7 1602.4 TRUE FALSE 1467.02241 1639.907771 1557.111114 1376.647185 1561.13696 1310.947362 1955.52636 1631.807447 1775.930122 1800.91741 0.814597273 0.910595768 0.864621057 0.764414391 0.866856499 0.727933083 1.085850106 0.90609788 0.986125245 1 10.81451631 -7.262018472 24.9999993 0.986693129 0.829706452 0.629186709 0.063636868 37.5613555 1621516.358 0.025136843 0.018105117 5.47E-08 7.262018472 -0.156986677 DLS(ph)MSEEDQMMR ddPTM_A459_MK2206_30min_R1 2 DLSMSEEDQMMR 12 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DLS(0.987)MS(0.013)EEDQMMR;DLS(0.988)MS(0.012)EEDQMMR 167.73 0.00041747 9776700 1614.92 1718.35 2080.64 1605.77 1752.01 1574.05 1978.69 1826.09 1503.92 1325.56 TRUE FALSE 1477.562574 1606.485103 1939.411954 1729.446684 1682.223732 1663.171351 1846.6952 1810.124688 1660.257866 1489.78038 0.991798921 1.078336864 1.301810642 1.16087358 1.129175652 1.116386934 1.23957546 1.215027874 1.114431287 1 10.54088395 -5.010403306 13.91173849 1.169102889 1.013390295 0.309345698 0.078216801 1.489383017 2006.956125 0.0189731 0.058764535 9.76E-06 5.010403306 -0.155712594 DLS(ph)PPDNHLSPQNDDALETR ddPTM_A459_MK2206_30min_R2 2 DLSPPDNHLSPQNDDALETR 20 0 O94972-2;O94972-3;O94972 O94972-2 TRIM37 E3 ubiquitin-protein ligase TRIM37 1 DLS(0.999)PPDNHLS(0.001)PQNDDALETR;DLS(1)PPDNHLSPQNDDALETR 107.75 0.00029135 6814200 3743.6 9054.8 6117.6 13092.7 13587.3 17600.2 13209.8 7629.9 12858.3 9240.1 TRUE FALSE 4030.212894 8605.151799 6321.557731 12022.98453 13053.79433 18269.98794 11475.33739 8627.154127 13976.69169 8938.596294 0.450877606 0.962696101 0.707220409 1.34506405 1.460385267 2.043943741 1.283796361 0.965157598 1.563633845 1 13.12583257 -5.787251565 5.401160358 1.410094812 0.728702524 0.500603593 0.307312147 0.151003799 12.02924437 0.08986144 0.14140071 1.63E-06 5.787251565 -0.681392288 DLS(ph)PQHMVVR ddPTM_A459_MK2206_30min_R2 3 DLSPQHMVVR 10 0 A0A2R8Y5E8;D6RB22;A0A2R8Y3N3;A0A2R8Y5P7;P49590-2;P49590 A0A2R8Y5E8 HARS2 "Probable histidine--tRNA ligase, mitochondrial" 1 DLS(1)PQHMVVR;DLS(1)PQHMVVR;DLS(1)PQHMVVR 96.756 0.014128 12578100 76211 76807 80907 88464 70974 81570 86758 62163 109133 76026 TRUE FALSE 82045.77276 72992.87607 83604.399 81236.20822 68187.20414 84674.20351 75366.57038 70287.91754 118625.1911 73545.27785 1.115581791 0.992488957 1.136774535 1.104574088 0.927145918 1.151320737 1.024764235 0.955709457 1.612954557 1 16.16634509 -8.220612182 24.99773205 1.306478779 1.052071577 0.302349716 0.155196554 485.2368344 297102.2119 0.094930758 0.035879653 6.02E-09 8.220612182 -0.254407202 DLS(ph)PTLIDNSAAK ddPTM_A459_MK2206_30min_R1 3 DLSPTLIDNSAAK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 DLS(0.979)PT(0.021)LIDNSAAK;DLS(0.952)PT(0.048)LIDNSAAK;DLS(0.933)PT(0.067)LIDNSAAK 200.19 0.00011849 47568000 7021.3 6906.1 8601.7 6146.98 6427.59 5753.97 7345.3 6968.22 8121.9 8439.6 TRUE FALSE 6424.101565 6456.511635 8017.84057 6620.421465 6171.56548 6079.754809 6855.308439 6907.297587 8966.20057 9485.161364 0.677279101 0.680696025 0.84530355 0.697976683 0.650654769 0.640975369 0.722740307 0.728221411 0.945287089 1 13.2114566 -8.296883191 2.924990853 0.999672243 0.702801784 0.803345052 0.053343467 0.115876791 1.85457958 0.053398004 0.014996919 5.05E-09 8.296883191 -0.29687046 DLS(ph)PTLIDNSAAK ddPTM_A459_MK2206_30min_R2 3 DLSPTLIDNSAAK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 DLS(0.799)PT(0.201)LIDNSAAK;DLS(0.998)PT(0.002)LIDNSAAK;DLS(0.998)PT(0.002)LIDNSAAK 209.22 8.71E-06 36414900 126011 116676 113253 105534 106201 84220 124376 89014 90178 127775 TRUE FALSE 135658.499 110882.0395 117028.7985 96911.53461 102031.0151 87425.05112 108045.2818 100648.4354 98021.51944 123605.7122 1.09750995 0.897062421 0.946791183 0.78403767 0.825455501 0.707289732 0.874112368 0.814270098 0.793017715 1 16.91538589 -3.970259995 0.883362265 0.820613699 1.91887273 0.494554331 0.077890408 6.110515548 1.310048057 0.025178665 9.131605988 0.000107088 3.970259995 1.098259031 DLS(ph)SEGQTK ddPTM_A459_MK2206_30min_R2 4 DLSSEGQTK 9 0 Q7L2Z9 Q7L2Z9 CENPQ Centromere protein Q 1 DLS(0.956)S(0.043)EGQT(0.001)K;DLS(0.5)S(0.5)EGQTK;DLS(0.977)S(0.023)EGQTK;DLS(0.98)S(0.02)EGQTK 158.08 0.00086805 16898800 140704 140680 125338 127426 131365 97547 160900 127832 105918 139448 TRUE FALSE 151476.4064 133694.0358 129516.7064 117014.8882 126206.95 101259.2194 139773.6367 144540.0813 115130.5562 134897.8232 1.122897337 0.991076302 0.960109684 0.86743348 0.9355744 0.750636423 1.036144494 1.071478234 0.853464893 1 17.04150754 -4.726887076 1.777022784 0.931131906 1.204575158 0.294608744 0.088749939 1.390336423 4.024106743 0.02511357 0.676136068 1.88E-05 4.726887076 0.273443252 DLS(ph)TPGLEK ddPTM_A459_MK2206_30min_R1 3 DLSTPGLEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DLS(0.5)T(0.5)PGLEK;DLS(0.5)T(0.5)PGLEK;DLS(0.934)T(0.066)PGLEK 145.99 0.0017932 35533800 10054.5 8427.2 13996.6 10367.4 9439.2 6136.4 8270.8 11831.6 8677.9 10561.6 TRUE FALSE 9199.311977 7878.587748 13046.54979 11165.89894 9063.216676 6483.837665 7719.070023 11728.15757 9579.998759 11870.05074 0.775001908 0.663736653 1.099114913 0.940678282 0.763536473 0.546235042 0.65029798 0.988046119 0.807073109 1 13.53503848 -8.540800334 1.334392012 0.988938801 0.792370376 0.122472257 0.158570325 1.145898269 4.478892253 0.164865209 0.049981365 2.88E-09 8.540800334 -0.196568425 DLS(ph)TPGLEK ddPTM_A459_MK2206_30min_R2 6 DLSTPGLEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DLS(0.926)T(0.074)PGLEK;DLS(0.988)T(0.012)PGLEK;DLS(0.991)T(0.009)PGLEK;DLS(0.654)T(0.346)PGLEK;DLS(0.987)T(0.013)PGLEK;DLS(0.992)T(0.008)PGLEK 152.04 0.0011492 148355000 1529210 1407770 1732350 1492370 1573530 1262669 1717940 1152129 1076025 1881730 TRUE FALSE 1646287.493 1337862.189 1790105.684 1370438.597 1511745.306 1310720.754 1492372.414 1302716.216 1169615.709 1820329.304 0.904389931 0.734956134 0.98339662 0.752852022 0.830479025 0.720045956 0.819836505 0.715648654 0.642529737 1 20.79576803 DLS(ph)TSPKPSPIPS(ph)PVLGR ddPTM_A459_MK2206_30min_R2 1 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 2 DLS(0.333)T(0.333)S(0.333)PKPS(0.002)PIPS(0.998)PVLGR 79.762 0.023336 5704100 16891 20786 19712 20583 15746 14212 19896 19057 15502 19682 TRUE FALSE 18184.18795 19753.79747 20369.18824 18901.30306 15127.73292 14752.84762 17283.6313 21547.81533 16850.33594 19039.77795 0.955063026 1.037501462 1.069822783 0.992727074 0.794533054 0.77484347 0.907764331 1.131726189 0.885006957 1 14.21672903 -6.016965178 24.05105136 0.912873452 1.023934448 0.196882794 0.098173317 760.9306957 1078751.989 0.031421759 0.041640911 9.62E-07 6.016965178 0.111060996 DLSHIGDAVVISCAK ddPTM_A459_MK2206_30min_R1 2 DLSHIGDAVVISCAK 15 0 P12004 P12004 PCNA Proliferating cell nuclear antigen 0 ; 128.73 0.0013275 23809000 15304.9 15821.9 15191.3 15008.5 14744.6 14569.1 16366.7 15267.4 13532.3 12734.7 FALSE TRUE 14003.13789 14791.89143 14160.15688 16164.45727 14157.29136 15393.98985 15274.90731 15133.91873 14939.03101 14312.37078 0.978394013 1.033503929 0.989364872 1.129404591 0.989164659 1.075572321 1.067252068 1.057401249 1.043784516 1 13.80497505 DLSHIGDAVVISCAK ddPTM_A459_MK2206_30min_R2 2 DLSHIGDAVVISCAK 15 0 P12004 P12004 PCNA Proliferating cell nuclear antigen 0 ; 165.86 0.00011724 16667300 173069 208624 193164 233264 216450 212161 237420 176901 185571 210320 FALSE TRUE 186319.2957 198264.0355 199603.9914 214205.585 207951.0854 220234.9355 206246.4688 200022.5681 201711.6301 203457.2756 0.915766198 0.974475034 0.981060966 1.052828336 1.022087241 1.082462816 1.013708987 0.983118286 0.991420088 1 17.63436635 -4.959877111 1.43465146 1.021383532 0.897527495 0.541133113 0.029294766 0.705872354 1.704943518 0.009297774 0.114874174 1.10E-05 4.959877111 -0.123856038 DLSLEEIQK ddPTM_A459_MK2206_30min_R1 1 DLSLEEIQK 9 0 A2A2D0;P16949;P16949-2;E5RGX5;Q93045;Q93045-2 A2A2D0 STMN1;STMN2 Stathmin;Stathmin-2 0 152.34 0.015476 2989800 1651.3 1257.6 1335.8 1531 1722.4 1543.7 1282.7 1598.8 1540.8 1718.5 FALSE TRUE 1510.848264 1175.730011 1245.129618 1648.917885 1653.793161 1631.10296 1197.133423 1584.82186 1700.971674 1931.400754 0.78225519 0.60874472 0.644676986 0.85374197 0.856266188 0.844518134 0.619826528 0.820555681 0.880693285 1 10.91543183 -14.52287874 0.085453561 1.796085088 0.547300012 0.432518796 0.091540428 239.6029524 1.429913854 34.95585301 2.773785272 3.00E-15 14.52287874 -1.248785075 DLSPPDNHLS(ph)PQNDDALETR ddPTM_A459_MK2206_30min_R2 1 DLSPPDNHLSPQNDDALETR 20 0 O94972-2;O94972-3;O94972 O94972-2 TRIM37 E3 ubiquitin-protein ligase TRIM37 1 DLS(0.026)PPDNHLS(0.974)PQNDDALETR 75.956 0.003885 3623500 11869 14003 15933 16640 14717 17895 17161 11443 15199 13490 TRUE FALSE 12777.69977 13307.63138 16464.19827 15280.45877 14139.13663 18576.00676 14907.74009 12938.63939 16520.98155 13049.8224 0.979147407 1.019755746 1.261641558 1.170932316 1.083473491 1.423468166 1.142371108 0.991480113 1.265992826 1 13.67174255 -5.125551443 5.912198707 1.172146398 0.989367485 0.231359222 0.122988757 0.305990614 13.16732442 0.031059474 0.085864902 7.49E-06 5.125551443 -0.182778913 DLSPPRYDS(ph)LVQSQAR ddPTM_A459_MK2206_30min_R1 1 DLSPPRYDSLVQSQAR 16 1 Q5JTU8;B1AMJ5;A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8 Q5JTU8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 DLS(0.018)PPRY(0.322)DS(0.658)LVQS(0.003)QAR 66.568 0.02901 11252000 2137.2 2253.1 2118.5 1942.6 2296.8 1936.1 2060 1878.1 2150.5 1803.2 TRUE FALSE 1955.419917 2106.42278 1974.702122 2092.219389 2205.313592 2045.720309 1922.581159 1861.67997 2374.052171 2026.594029 0.964879936 1.039390598 0.974394523 1.032382094 1.088187156 1.009437647 0.94867602 0.918625015 1.171449307 1 10.9848414 -4.743233524 23.18688036 1.016229043 0.964879529 0.053542231 0.067984021 1690.010694 2152093.426 0.016691 0.476092881 1.81E-05 4.743233524 -0.051349514 DLSPT(ph)LIDNSAAK ddPTM_A459_MK2206_30min_R2 1 DLSPTLIDNSAAK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 DLS(0.115)PT(0.885)LIDNSAAK 127.03 0.0046038 5760400 29540 28058 27463 36761 27108 15781 31560 30468 23253 27490 TRUE FALSE 31801.60511 26664.68052 28378.60271 33757.50871 26043.60371 16381.55701 27416.13409 34450.27221 25275.50391 26593.00355 1.195863606 1.002695332 1.067145449 1.269413161 0.979340437 0.616010034 1.030952898 1.295463754 0.950456907 1 14.69875911 -1.522878748 0.552127224 1.009879299 8.003732548 0.075279218 0.176649996 480.2482984 4.369043866 0.095289239 3986.481552 0.03 1.522878748 6.993853249 DLSS(ph)SPPGPYGQEMYAFR ddPTM_A459_MK2206_30min_R1 3 DLSSSPPGPYGQEMYAFR 18 0 O43741;O43741-2 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 DLS(0.009)S(0.901)S(0.09)PPGPYGQEMYAFR;DLS(0.005)S(0.826)S(0.169)PPGPYGQEMYAFR;DLS(0.237)S(0.381)S(0.381)PPGPYGQEMYAFR 287.57 1.33E-80 54701800 5672.2 5279.82 5471.03 4404.45 5761.3 5036.89 5791.03 5458.88 4851.01 3993.95 TRUE FALSE 5189.749604 4936.102758 5099.671727 4743.681502 5531.815221 5322.074359 5404.720955 5411.153588 5355.289849 4488.750679 1.156167935 1.09966071 1.136100464 1.056793269 1.232373018 1.18564713 1.204059067 1.205492124 1.193046848 1 12.13209825 -6.264775194 24.97853344 1.182852642 1.11299488 0.142135933 0.065341834 442.623433 3314357.759 0.018574842 0.021898657 5.44E-07 6.264775194 -0.069857762 DLSS(ph)SPPGPYGQEMYAFR ddPTM_A459_MK2206_30min_R2 1 DLSSSPPGPYGQEMYAFR 18 0 O43741;O43741-2 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 DLS(0.008)S(0.77)S(0.222)PPGPYGQEMYAFR 223.68 8.95E-15 3173600 23425 27811 24484 27594 28055 24914 28071 21462 23397 24091 TRUE FALSE 25218.43601 26429.94618 25300.28434 25339.48193 26953.41973 25862.11973 24385.24398 24267.15709 25432.02877 23304.91264 1.082108154 1.134093338 1.085620218 1.087302163 1.156555279 1.109728242 1.046356378 1.041289339 1.091273293 1 14.50834648 -8.296735791 0.539691518 1.003886554 1.111408845 0.506671662 0.030453848 0.729832178 0.527208765 0.033871146 0.017126477 5.05E-09 8.296735791 0.107522291 DLSSS(ph)PPGPYGQEMYAFR ddPTM_A459_MK2206_30min_R1 3 DLSSSPPGPYGQEMYAFR 18 0 O43741;O43741-2 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 DLS(0.008)S(0.086)S(0.906)PPGPYGQEMYAFR;DLSS(0.07)S(0.93)PPGPYGQEMYAFR;DLS(0.02)S(0.127)S(0.853)PPGPYGQEMYAFR 283.49 2.81E-67 64510500 7563.8 7692.3 7189.5 6229.8 7766.8 6827.8 7590.8 6824.9 6070.6 6681.3 TRUE FALSE 6920.459091 7191.529872 6701.496771 6709.620275 7457.43191 7214.384136 7084.431582 6765.230619 6701.660594 7509.029885 0.921618264 0.957717572 0.892458397 0.893540228 0.993128543 0.960761143 0.943454972 0.900946024 0.892480213 1 12.87441082 -5.14128124 18.53518047 0.932413464 0.939644753 0.000155391 0.039400984 31.84566981 4807.468226 0.010351295 0.027388175 7.22E-06 5.14128124 0.007231289 DLSSS(ph)PPGPYGQEMYAFR ddPTM_A459_MK2206_30min_R2 6 DLSSSPPGPYGQEMYAFR 18 0 O43741;O43741-2 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 DLS(0.012)S(0.173)S(0.815)PPGPYGQEMYAFR;DLSS(0.033)S(0.967)PPGPYGQEMYAFR;DLS(0.006)S(0.041)S(0.952)PPGPYGQEMYAFR;DLSS(0.03)S(0.969)PPGPYGQEMYAFR;DLS(0.023)S(0.136)S(0.84)PPGPY(0.001)GQEMYAFR;DLS(0.012)S(0.047)S(0.936)PPGPY(0.004)GQEMYAFR 178.02 1.90E-09 75339200 165172.3 197933 193443 195972 184147 192071 210490 159251.2 179032 180132.6 TRUE FALSE 177818.0183 188103.935 199892.2931 179960.4607 176916.4635 199380.3965 182852.4102 180065.8786 194603.8797 174254.888 1.020447807 1.079475802 1.147125888 1.032742684 1.015274036 1.144188256 1.049338772 1.033347648 1.116777165 1 17.4108396 -11.10206813 3.207449008 0.996822413 1.071107272 0.168732428 0.04725533 17405499.9 1258.383504 408544.8368 0.011332043 7.91E-12 11.10206813 0.07428486 DLST(ph)PGLEK ddPTM_A459_MK2206_30min_R1 4 DLSTPGLEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DLS(0.068)T(0.932)PGLEK;DLS(0.089)T(0.911)PGLEK;DLS(0.064)T(0.936)PGLEK;DLS(0.079)T(0.921)PGLEK 161.51 0.0020169 221337000 65368 67379 63187 57035 63516 51535 65610 61543 57999 54784 TRUE FALSE 59808.10834 62992.61485 58898.04249 61427.84558 60986.02322 54452.86716 61233.27661 61004.93604 64028.2036 61571.05552 0.971367274 1.023088111 0.956586532 0.99767407 0.990498258 0.884390672 0.994513998 0.990805428 1.039907519 1 15.90996468 -7.92302607 2.751026187 1.018788101 0.973125958 0.202627134 0.035852988 0.456655054 6.742497223 0.026019255 0.0100732 1.19E-08 7.92302607 -0.045662143 DLST(ph)PGLEK ddPTM_A459_MK2206_30min_R2 1 DLSTPGLEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DLS(0.001)T(0.999)PGLEK 143.5 0.004742 52717000 557050 563460 562550 553760 565140 436090 608550 377960 381630 553490 TRUE FALSE 599698.1763 535479.3957 581305.1362 508516.0366 542949.764 452685.7105 528646.654 427360.6697 414823.4876 535429.6666 1.120031656 1.000092877 1.085679731 0.949734518 1.014044977 0.845462511 0.987331646 0.798163973 0.774748792 1 19.03033755 -6.369040605 0.793930959 0.860166378 1.076457218 0.483359273 0.079376219 0.553234847 0.764840205 0.044460049 0.066865923 4.28E-07 6.369040605 0.216290841 DLSTS(ph)PKPSPIPSPVLGR ddPTM_A459_MK2206_30min_R2 2 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 DLS(0.003)T(0.224)S(0.772)PKPS(0.001)PIPSPVLGR;DLS(0.044)T(0.134)S(0.817)PKPS(0.006)PIPSPVLGR 79.695 0.0065353 31796000 87760 111872 104715 100599 100369 71561 126754 99982 79580 112914 TRUE FALSE 94478.97308 106316.5992 108206.1458 92379.7399 96428.00875 74284.304 110111.0475 113049.9907 86501.72455 109229.6254 0.864957402 0.97333117 0.990630018 0.845738869 0.882800874 0.680074693 1.008069442 1.034975541 0.791925489 1 16.73700467 -9.878712879 8.413986305 1.000003145 0.900974444 0.080118554 0.103954846 0 0 0.103100515 0.025005548 1.32E-10 9.878712879 -0.099028701 DLSYCLSGMYDHR ddPTM_A459_MK2206_30min_R1 2 DLSYCLSGMYDHR 13 0 P52597 P52597 HNRNPF "Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed" 0 ; 149.57 0.00072485 30004000 12332.9 11823.5 11760.6 9581.6 13702.3 12849.1 13013.2 12188.2 10222.9 9153.5 FALSE TRUE 11283.92209 11053.788 10962.32324 10319.57649 13156.50838 13576.60494 12145.11317 12081.63985 11285.60704 10287.50469 1.096857055 1.074486801 1.065595941 1.00311755 1.27888237 1.319717983 1.180569394 1.174399451 1.097020841 1 13.32860547 -6.253478396 24.98286181 1.191322848 1.061446771 0.287351261 0.086541767 721.952882 2265604.535 0.026212983 0.033230554 5.58E-07 6.253478396 -0.129876077 DLTDY(ph)LMK ddPTM_A459_MK2206_30min_R1 1 DLTDYLMK 8 0 P60709;A0A2R8Y793;P63267-2;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8;P68133;P68032;P63267;P62736;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2" 1 DLTDY(1)LMK 145.63 0.0011036 0 1077.9 1085.9 1304.9 992.66 1016.8 860.85 1684.3 1147.9 899.44 1143.4 TRUE FALSE 986.2189447 1015.207713 1216.327024 1069.114845 976.2987029 909.5905831 1571.94342 1137.864031 992.9400067 1285.053024 0.767453892 0.790012313 0.946518938 0.831961658 0.759734178 0.707823386 1.223251796 0.885460763 0.772684074 1 10.32761217 DLTDYLMK ddPTM_A459_MK2206_30min_R1 2 DLTDYLMK 8 0 P60709;A0A2R8Y793;P63267-2;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8;P68133;P68032;P63267;P62736;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2" 0 ; 141.47 0.03153 185401000 12584.2 11387 11891.1 12214.2 13758.9 11398.1 12597.8 11999.5 9785.7 10900.9 FALSE TRUE 11513.84771 10645.70423 11083.96526 13154.9398 13210.85388 12043.45057 11757.42375 11894.58964 10802.95853 12251.38579 0.93979962 0.868938781 0.904711145 1.073751168 1.078315066 0.983027617 0.959681129 0.970877078 0.881774415 1 13.58065733 -5.636809322 11.33640211 0.993061968 0.900020022 0.347456746 0.055198429 0.436255917 41.33724732 0.016309517 0.028256142 2.31E-06 5.636809322 -0.093041946 DLTDYLMK ddPTM_A459_MK2206_30min_R2 2 DLTDYLMK 8 0 P60709;A0A2R8Y793;P63267-2;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8;P68133;P68032;P63267;P62736;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2" 0 ; 141.47 0.03153 137151000 319310 357920 358320 382630 342760 322630 412370 296860 308030 362990 FALSE TRUE 343756.6191 340146.2133 370266.21 351367.905 329301.5202 334907.9107 358225.3237 335660.6213 334821.8926 351145.666 0.978957317 0.968675527 1.054451886 1.000632897 0.937791783 0.95375778 1.020161598 0.955901364 0.953512815 1 18.4217101 -6.050787881 24.01919392 0.969619132 1.002501211 0.188001373 0.030962971 384.9421797 182050.1206 0.009467911 0.01222314 8.90E-07 6.050787881 0.032882079 DLTNNNIPHLLS(ph)PK ddPTM_A459_MK2206_30min_R1 2 DLTNNNIPHLLSPK 14 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 DLTNNNIPHLLS(1)PK;DLTNNNIPHLLS(1)PK 128.1 0.00076853 53670000 11575.8 13744.9 13242.2 10813.8 9126.4 7533.2 7897.8 7828 8614.3 7937 TRUE FALSE 10591.21742 12850.10451 12343.35636 11646.68075 8762.876163 7959.723274 7370.952172 7759.560621 9509.787312 8920.295481 1.187316883 1.440546957 1.383738508 1.305638448 0.982352679 0.8923161 0.826312557 0.869877084 1.066084339 1 13.12287578 -6.280628564 3.333191355 0.917623504 1.348582184 0.8280662 0.08719137 0.092580371 2.15540908 0.027937603 0.034128564 5.24E-07 6.280628564 0.43095868 DLTNNNIPHLLS(ph)PK ddPTM_A459_MK2206_30min_R2 3 DLTNNNIPHLLSPK 14 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 DLTNNNIPHLLS(1)PK;DLTNNNIPHLLS(1)PK;DLTNNNIPHLLS(1)PK 205.98 7.95E-06 26422900 186196 172971 169663 147600 152898 108102 169189 124761 101900 134652 TRUE FALSE 200451.3089 164381.5117 175319.4797 135540.6079 146894.4563 112215.8974 146974.2811 141067.6911 110763.0778 130258.3163 1.538875326 1.26196558 1.345936941 1.040552433 1.127716529 0.861487393 1.128329348 1.082984143 0.850334021 1 16.99101596 -4.646065775 0.555391524 0.982372305 1.942678774 0.735445861 0.103927883 2.379489084 0.501810707 0.056102297 1.528970989 2.26E-05 4.646065775 0.960306469 DLTQMADELRR ddPTM_A459_MK2206_30min_R1 4 DLTQMADELRR 11 1 P41227;P41227-2;C9JN83 P41227 NAA10 N-alpha-acetyltransferase 10 0 ;;; 169.21 0.0021604 54014800 12567.7 13323.4 13311.8 11641.7 13965.9 12073 12293.2 11829.3 10487.2 8674.6 FALSE TRUE 11498.75112 12456.04424 12408.2321 12538.34575 13409.60863 12756.56283 11473.14306 11725.87768 11577.38197 9749.274938 1.179446799 1.277638011 1.272733838 1.286079819 1.37544676 1.308462722 1.176820136 1.202743563 1.187512101 1 13.25107921 -8.662807158 0.740045017 1.001623667 1.281556504 0.702570409 0.053232757 0.508569496 0.601224127 0.056981684 0.021239796 2.17E-09 8.662807158 0.279932837 DLTQMADELRR ddPTM_A459_MK2206_30min_R2 3 DLTQMADELRR 11 1 P41227;P41227-2;C9JN83 P41227 NAA10 N-alpha-acetyltransferase 10 0 ;; 110.84 0.008433 4817000 22259.1 29268 24104.6 29053.1 28581.1 32796.9 31452.8 22821.2 31286.1 30665.5 FALSE TRUE 23963.27381 27814.59368 24908.23533 26679.36879 27458.86241 34045.00901 27323.00958 25804.0092 34007.30843 29664.88725 0.807799255 0.937626813 0.839653801 0.89935851 0.925635152 1.14765341 0.921055568 0.869850237 1.146382528 1 14.85646868 -6.532271466 24.99558875 1.00661221 0.878474321 0.383164275 0.087139557 243.4841137 647947.0813 0.028541569 0.028577366 2.94E-07 6.532271466 -0.128137889 DLTSLETTSEMEAGS(ph)PENKK ddPTM_A459_MK2206_30min_R1 1 DLTSLETTSEMEAGSPENKK 20 1 Q5VYS8-5;Q5VYS8-3;Q5VYS8-2;Q5VYS8-4;Q5VYS8-6;Q5VYS8 Q5VYS8-5 ZCCHC6 Terminal uridylyltransferase 7 1 DLT(0.003)S(0.003)LET(0.002)T(0.002)S(0.012)EMEAGS(0.978)PENKK 81.312 0.0019263 12638000 1013.3 1093.9 1140 1086.6 781.19 678.44 662.75 820.82 901.66 757.48 TRUE FALSE 927.1135139 1022.686911 1062.619976 1170.29012 750.0735481 716.8526865 618.5391568 813.6436573 995.3907836 851.3223411 1.089027586 1.201292227 1.248199331 1.374673333 0.881068794 0.842046134 0.726562815 0.95574099 1.169229017 1 9.733561681 -6.274814428 24.9498332 0.912414643 1.227790642 0.574425418 0.125668452 561.6175166 1047639.897 0.041543529 0.047364784 5.31E-07 6.274814428 0.315375999 DLTSLETTSEMEAGS(ph)PENKK ddPTM_A459_MK2206_30min_R2 1 DLTSLETTSEMEAGSPENKK 20 1 Q5VYS8-5;Q5VYS8-3;Q5VYS8-2;Q5VYS8-4;Q5VYS8-6;Q5VYS8 Q5VYS8-5 ZCCHC6 Terminal uridylyltransferase 7 1 DLTSLETTSEMEAGS(1)PENKK 107.75 0.00022614 7360000 14352 17293 14966 14135 15281 10321 20051 13531 12575 20846 TRUE FALSE 15450.80015 16434.25477 15464.95897 12980.12528 14680.99116 10713.77289 17418.27961 15299.54816 13668.75077 20165.79673 0.766188431 0.814956879 0.766890551 0.643670342 0.728014437 0.531284384 0.863753605 0.758688009 0.677818534 1 14.29962279 -10.57401103 4.867741429 1.000003038 0.728266286 0.459938075 0.08844821 6.37E-06 1.24E-06 0.087024023 0.021105918 2.67E-11 10.57401103 -0.271736752 DLTTAGAVTQCYR ddPTM_A459_MK2206_30min_R2 1 DLTTAGAVTQCYR 13 0 M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543 M0R0P7 RPL18A 60S ribosomal protein L18a 0 125.23 0.029777 4867600 7525.8 7400.9 8144.6 9160.9 7647.7 8178.1 10166 6774.7 6513.2 7669 FALSE TRUE 8101.981034 7033.382068 8416.136899 8412.425166 7347.412871 8489.323326 8831.191988 7660.176551 7079.706363 7418.761158 1.092093526 0.948053444 1.134439662 1.133939345 0.990382722 1.144304709 1.190386346 1.0325412 0.954297653 1 12.85696258 -7.998065898 24.96837911 0.982572336 1.088387385 0.302393853 0.069384273 74.50117711 961778.8542 0.039753549 0.018893585 1.00E-08 7.998065898 0.105815049 DLVLPTQALPAS(ph)PALK ddPTM_A459_MK2206_30min_R1 2 DLVLPTQALPASPALK 16 0 J3KSZ6;U3KQ35;H3BR06;Q15554 J3KSZ6 TERF2 Telomeric repeat-binding factor 2 1 DLVLPT(0.001)QALPAS(0.999)PALK;DLVLPTQALPAS(1)PALK 173.49 4.49E-06 256150000 26619 25656 27042 22267.7 23290.4 20749.5 22684 22330 22448.6 19779.6 TRUE FALSE 24354.91427 23985.78974 25206.46438 23982.76211 22362.69405 21924.31876 21170.79175 22134.77116 24782.2123 22230.04618 1.095585411 1.078980653 1.133891679 1.078844458 1.005967053 0.986247108 0.952350327 0.995714133 1.114807055 1 14.44022332 -6.190996184 3.816472996 1.004617265 1.101000945 0.523299284 0.041219331 0.192021664 5.482099846 0.013105745 0.017029144 6.44E-07 6.190996184 0.096383679 DLVLPTQALPAS(ph)PALK ddPTM_A459_MK2206_30min_R2 3 DLVLPTQALPASPALK 16 0 J3KSZ6;U3KQ35;H3BR06;Q15554 J3KSZ6 TERF2 Telomeric repeat-binding factor 2 1 DLVLPTQALPAS(1)PALK;DLVLPTQALPAS(1)PALK;DLVLPTQALPAS(1)PALK 145.99 0.00035951 255652900 433150 544380 434820 490560 475700 426250 520080 406258 378821 458580 TRUE FALSE 466312.297 517346.8808 449316.6818 450479.6788 457021.6278 442471.2424 451792.8713 459357.3155 411770.1658 443616.5722 1.051160679 1.166202782 1.012849181 1.015470808 1.030217662 0.997418199 1.018431005 1.035482767 0.928211865 1 18.75895374 -5.340605991 8.443155089 1.007326941 1.108438984 0.542099052 0.038154438 0.21783736 21.41312558 0.009366935 0.019579037 4.56E-06 5.340605991 0.101112042 DLVMGS(ph)SPQLK ddPTM_A459_MK2206_30min_R1 4 DLVMGSSPQLK 11 0 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 DLVMGS(0.765)S(0.235)PQLK;DLVMGS(0.584)S(0.416)PQLK;DLVMGS(0.5)S(0.5)PQLK;DLVMGS(0.632)S(0.368)PQLK 174.21 5.99E-08 78997700 21225.9 23401.8 24482.9 18870.6 18530.6 20986.7 25255.8 20694.1 24824.2 27984.6 TRUE FALSE 19420.52574 21878.33857 22821.06896 20324.01688 17792.48696 22174.94882 23571.03166 20513.17367 27404.76442 31451.54352 0.617474488 0.695620504 0.725594563 0.646200937 0.56571109 0.70505121 0.749439583 0.652215166 0.871332894 1 14.9408432 -8.445642967 2.693104593 0.999574102 0.670902798 0.818310849 0.051731569 0.105158651 1.596551775 0.052141386 0.014135231 3.58E-09 8.445642967 -0.328671304 DLVMGS(ph)SPQLK ddPTM_A459_MK2206_30min_R2 5 DLVMGSSPQLK 11 0 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 DLVMGS(0.746)S(0.254)PQLK;DLVMGS(0.701)S(0.299)PQLK;DLVMGS(0.5)S(0.5)PQLK;DLVMGS(0.5)S(0.5)PQLK;DLVMGS(0.842)S(0.158)PQLK 177.16 6.63E-05 83000900 440181 413173 472315 480895 414878 360502 520808 423505 361329 477366 TRUE FALSE 473881.5958 392655.4296 488061.7464 441604.3402 398587.8051 374221.1562 452425.284 478858.5576 392756.7433 461789.5865 1.026185106 0.850290784 1.056892058 0.956289083 0.863137275 0.810371579 0.979721711 1.036962659 0.850510178 1 18.81687611 -10.80415263 24.11447297 0.99999999 0.936610189 0.048321387 0.084265403 0 0 0.081859313 0.0198538 1.57E-11 10.80415263 -0.0633898 DLVMGS(ph)SPQLKR ddPTM_A459_MK2206_30min_R1 1 DLVMGSSPQLKR 12 1 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 DLVMGS(0.646)S(0.354)PQLKR 77.633 0.023349 36428000 2600.8 2995.5 2608.4 2733.1 3249.4 2616.8 2785.5 2956.9 2336.6 1768.4 TRUE FALSE 2379.588303 2800.492406 2431.349075 2943.603836 3119.969517 2764.960955 2599.684377 2931.048135 2579.497932 1987.482743 1.197287529 1.409065017 1.223330912 1.481071394 1.569809614 1.391187403 1.308028654 1.474754005 1.297871864 1 10.95672662 -10.35536925 8.401643616 0.999997564 1.379837225 0.49673378 0.112260215 1.58E-10 0 0.109914387 0.026658155 4.41E-11 10.35536925 0.379839661 DLVMGS(ph)SPQLKR ddPTM_A459_MK2206_30min_R2 1 DLVMGSSPQLKR 12 1 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 DLVMGS(0.5)S(0.5)PQLKR 66.059 0.039244 8711400 18711 43355 38604 44568 47348 44864 38011 29920 49031 45034 TRUE FALSE 20143.52855 41202.05374 39891.03809 40926.65183 45488.87962 46571.33096 33020.11004 33830.64673 53295.62775 43564.54427 0.462383548 0.945770338 0.915676699 0.939448639 1.044172053 1.069019124 0.757958349 0.77656377 1.223371635 1 15.41086683 -4.761246808 7.23650288 0.954293791 0.453109871 0.573517656 0.12945251 0.079548382 26.55969312 0.032386723 0.195358573 1.73E-05 4.761246808 -0.501183919 DLVQPDKPAS(ph)PK ddPTM_A459_MK2206_30min_R1 1 DLVQPDKPASPK 12 1 Q6PJT7-5;Q6PJT7;G3V411;Q6PJT7-9;Q6PJT7-2;H0YJA2;G3V4R5 Q6PJT7-5;Q6PJT7-9 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 DLVQPDKPAS(1)PK 194.77 0.00077968 30995000 3387.6 4495 4027.9 3474.7 1971.4 1776.3 2296.2 2827.6 3796.5 3400.9 TRUE FALSE 3099.466831 4202.374683 3754.49737 3742.321996 1892.874963 1876.872571 2143.024688 2802.878591 4191.159761 3822.229167 0.810905546 1.099456495 0.982279504 0.979094092 0.495228015 0.49104135 0.560674045 0.733309927 1.096522364 1 11.90019856 -6.227962295 22.86233117 0.695767646 0.97835331 0.245275924 0.199416924 292.3517774 199653.2231 0.061091778 0.078860109 5.92E-07 6.227962295 0.282585664 DLVQPDKPAS(ph)PK ddPTM_A459_MK2206_30min_R2 2 DLVQPDKPASPK 12 1 Q6PJT7-5;Q6PJT7;G3V411;Q6PJT7-9;Q6PJT7-2;H0YJA2;G3V4R5 Q6PJT7-5;Q6PJT7-9 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK 84.169 0.01817 141621000 343280 299670 358970 242720 262810 141913 355270 239730 180484 322770 TRUE FALSE 369561.7807 284788.8236 370937.8806 222888.9996 252490.7589 147313.5987 308622.6222 271063.5341 196182.1721 312238.0413 1.183589864 0.91208881 1.187997078 0.71384319 0.808648292 0.47179901 0.988420953 0.868131035 0.628309642 1 18.25228679 -5.767426094 24.99982536 0.77393563 1.07631162 0.424936842 0.165602797 134.4682488 561526.2625 0.045253301 0.069141087 1.71E-06 5.767426094 0.30237599 DLVSFPLS(ph)PAVR ddPTM_A459_MK2206_30min_R1 2 DLVSFPLSPAVR 12 0 J3QLB5;E9PI66;Q7KZJ0;J3QKK3;O43502-2;O43502 J3QLB5 RAD51C DNA repair protein RAD51 homolog 3 1 DLVSFPLS(1)PAVR;DLVSFPLS(1)PAVR 190.85 0.00013892 14674200 4195.4 3878.6 3659.4 3076.2 3745.5 3575.5 3872.1 3370.3 3381.7 3071.9 TRUE FALSE 3838.559199 3626.102435 3411.010124 3313.129457 3596.308804 3777.94172 3613.799274 3340.833822 3733.239817 3452.470164 1.111829796 1.050292186 0.987991195 0.959640287 1.04166253 1.094272084 1.046728604 0.967664792 1.081324281 1 11.75341323 -7.060267039 0.004189298 4.70E-08 2.062453316 0.049464025 0.049346845 50918.15081 105.7562509 25808.72064 26251.1288 8.70E-08 7.060267039 2.062453269 DLVSFPLS(ph)PAVR ddPTM_A459_MK2206_30min_R2 2 DLVSFPLSPAVR 12 0 J3QLB5;E9PI66;Q7KZJ0;J3QKK3;O43502-2;O43502 J3QLB5 RAD51C DNA repair protein RAD51 homolog 3 1 DLVSFPLS(1)PAVR;DLVSFPLS(1)PAVR 174.94 0.00012235 6347900 19745 22807.1 20802.4 23797.4 22056 19532.3 27478 15504.5 15756 20333.5 TRUE FALSE 21256.69238 21674.53258 21495.94163 21853.0763 21189.97062 20275.61536 23870.10559 17530.99138 17126.4284 19670.01956 1.080664527 1.101907017 1.092827669 1.110983964 1.077272473 1.030787758 1.213527293 0.891254395 0.870686902 1 14.26371077 -7.781279205 24.99993398 0.910727863 1.097603505 0.702748606 0.053642672 125.0542429 157577.1604 0.027660192 0.013314884 1.65E-08 7.781279205 0.186875641 DLY(ph)ANTVLSGGTTMYPGIADR ddPTM_A459_MK2206_30min_R1 1 DLYANTVLSGGTTMYPGIADR 21 0 P60709;A0A2R8Y793;P63261 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 DLY(0.973)ANTVLSGGT(0.014)T(0.014)MYPGIADR 223.03 1.18E-19 18269000 2224 2158.8 2547.1 2145.6 2469.5 2295.8 3054.6 2678.1 2129.3 2090.1 TRUE FALSE 2034.837121 2018.261728 2374.209949 2310.854484 2371.134586 2425.786212 2850.833207 2654.685654 2350.648355 2349.037367 0.866242977 0.859186727 1.010716126 0.983745306 1.009406925 1.032672466 1.213617649 1.1301164 1.000685807 1 11.19785395 -5.485023486 0.734762559 1.088882431 0.80925248 0.571354929 0.065695077 0.945205046 0.72482493 0.032492321 0.188193768 3.27E-06 5.485023486 -0.279629951 DLY(ph)ANTVLSGGTTMYPGIADR ddPTM_A459_MK2206_30min_R2 1 DLYANTVLSGGTTMYPGIADR 21 0 P60709;A0A2R8Y793;P63261 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 DLY(0.793)ANTVLS(0.001)GGT(0.019)T(0.187)MYPGIADR 179.46 4.44E-13 6346000 14484 16337 16349 16710 13939 16866 17160 16610 15092 15107 TRUE FALSE 15592.90618 15525.72834 16894.0675 15344.73955 13391.68482 17507.84745 14906.87139 18780.98403 16404.67488 14614.05983 1.066979769 1.062382974 1.156014667 1.049998408 0.916356234 1.198013944 1.020036291 1.285131185 1.122526873 1 13.8350694 -6.839095871 24.99999739 1.136392743 1.056809254 0.129939362 0.093810955 68.96931414 22199.83326 0.032564928 0.028719573 1.45E-07 6.839095871 -0.079583489 DLYANT(ph)VLSGGTTMYPGIADR ddPTM_A459_MK2206_30min_R1 1 DLYANTVLSGGTTMYPGIADR 21 0 P60709;A0A2R8Y793;P63261 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 DLY(0.015)ANT(0.845)VLS(0.052)GGT(0.044)T(0.044)MYPGIADR 184.66 1.09E-14 14863000 2643.6 2396.7 2813.2 2224.2 2820.4 2496.5 3290.7 2378.1 2204.8 2120.7 TRUE FALSE 2418.747938 2240.674394 2622.247822 2395.508269 2708.057496 2637.849673 3071.183407 2357.308522 2433.99685 2383.428326 1.014818827 0.940105633 1.10019999 1.005068306 1.136202614 1.106745961 1.288557064 0.989041078 1.021216717 1 11.21882253 -6.250429161 24.00900134 1.100481721 1.015777412 0.141805857 0.088574877 812.4014362 1771526.691 0.027076538 0.034605285 5.62E-07 6.250429161 -0.084704308 DLYANTVLS(ph)GGTTMYPGIADR ddPTM_A459_MK2206_30min_R1 1 DLYANTVLSGGTTMYPGIADR 21 0 P60709;A0A2R8Y793;P63261 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 DLYANTVLS(0.533)GGT(0.279)T(0.151)MY(0.037)PGIADR 88.78 0.0032534 5100900 1290.9 1106.4 1151.8 1238.2 1191.4 945.26 1479.2 1248.4 1327.9 860.28 TRUE FALSE 1181.102176 1034.373159 1073.619025 1333.566379 1143.944015 998.7798043 1380.525267 1237.48537 1465.939957 966.8579812 1.221588071 1.069829467 1.110420606 1.379278451 1.1831562 1.033016041 1.427846999 1.279903972 1.516189539 1 9.917160182 -7.269933514 24.96446863 1.329310451 1.169752327 0.159909127 0.153130366 1034.06211 3039120.861 0.061214057 0.042056193 5.37E-08 7.269933514 -0.159558124 DLYANTVLSGGT(ph)TMYPGIADR ddPTM_A459_MK2206_30min_R2 2 DLYANTVLSGGTTMYPGIADR 21 0 P60709;A0A2R8Y793;P63261 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 DLYANT(0.197)VLS(0.197)GGT(0.303)T(0.303)MYPGIADR;DLYANTVLS(0.155)GGT(0.831)T(0.013)MYPGIADR 242.8 6.02E-31 8217000 58906.1 67009.9 58873.5 64346 49552.4 61336.1 54677 58828.6 64714.4 49838 TRUE FALSE 63415.99631 63682.28581 60836.31311 59088.72597 47606.7238 63670.28827 47497.84422 66517.70001 70343.14154 48211.79014 1.315362821 1.320886149 1.261855511 1.225607383 0.987449826 1.320637298 0.985191466 1.379697784 1.459044382 1 15.55709838 -5.586725752 2.740799099 1.197667869 1.315875567 0.094115576 0.15672111 0.728019305 10.99044964 0.045152333 0.093680064 2.59E-06 5.586725752 0.118207698 DLYANTVLSGGTT(ph)MYPGIADR ddPTM_A459_MK2206_30min_R1 2 DLYANTVLSGGTTMYPGIADR 21 0 P60709;A0A2R8Y793;P63261 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 DLYANT(0.001)VLS(0.028)GGT(0.101)T(0.829)MY(0.041)PGIADR;DLYANTVLSGGT(0.241)T(0.759)MYPGIADR 356.74 5.44E-196 23906000 3421.1 4093.3 4208.9 3328 4271.8 3698.8 4245.9 3958 3559.7 3460.9 TRUE FALSE 3130.11748 3826.825426 3923.211595 3584.323137 4101.64516 3908.22286 3962.663758 3923.395623 3929.743554 3889.66242 0.804727285 0.983845129 1.008625215 0.921499798 1.054499007 1.004771735 1.018768039 1.008672527 1.010304527 1 11.92542924 -4.759109423 4.126922659 1.002932307 0.783665068 0.783832401 0.031105543 0.106896887 3.529429467 0.007768808 0.071993242 1.74E-05 4.759109423 -0.219267239 DLYANTVLSGGTTMYPGIADR ddPTM_A459_MK2206_30min_R1 5 DLYANTVLSGGTTMYPGIADR 21 0 P60709;A0A2R8Y793;P63261 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 0 ;;;; 292.38 1.02E-85 145610000 15208.9 15160.3 15178.8 14550.7 17156.5 14431.8 15990.5 14229 12806.8 12954.2 FALSE TRUE 13915.30319 14173.36171 14148.50535 15671.39744 16473.12028 15248.91604 14923.80292 14104.59735 14138.11269 14559.0641 0.95578281 0.973507749 0.971800471 1.076401432 1.131468353 1.047382987 1.025052354 0.968784618 0.971086644 1 13.82963 -5.668504934 8.48233608 1.034650128 0.966898215 0.290679531 0.045964924 0.374321862 30.39849724 0.01437444 0.024932302 2.15E-06 5.668504934 -0.067751913 DLYANTVLSGGTTMYPGIADR ddPTM_A459_MK2206_30min_R2 3 DLYANTVLSGGTTMYPGIADR 21 0 P60709;A0A2R8Y793;P63261 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 0 ;; 241.68 4.71E-30 26043300 65439 81365 74360 68123 86253 74523 80709 69198 72340 69883 FALSE TRUE 70449.06015 77324.53242 76839.12529 62557.13299 82866.27383 77359.02499 70111.81135 78242.41619 78632.00244 67602.72343 1.042103877 1.143807949 1.136627659 0.925364095 1.225783069 1.144318173 1.03711519 1.157385564 1.163148442 1 16.04479375 DLYDAGVKR ddPTM_A459_MK2206_30min_R2 3 DLYDAGVKR 9 1 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;H0YM50;H0YNP5;H0YN28;H0YL33 P07355 ANXA2 Annexin A2;Annexin 0 ;; 95.358 0.030371 108611000 307395 405122 383670 446547 447698 380285 452773 342599 432542 382358 FALSE TRUE 330929.3975 385004.2306 396461.3663 410062.6817 430119.127 394757.0122 393323.3612 387377.8656 470163.7213 369881.6898 0.894689861 1.040884805 1.071859941 1.108632011 1.162855959 1.067252105 1.063376134 1.047302087 1.27111921 1 18.49670436 -4.47549617 1.337149227 1.103245979 0.652915442 0.440988876 0.069952863 2.434086818 2.276814159 0.01963243 1.813664873 3.35E-05 4.47549617 -0.450330537 DLYPFTVNT(ph)SNQGSR ddPTM_A459_MK2206_30min_R2 1 DLYPFTVNTSNQGSR 15 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 DLYPFTVNT(0.5)S(0.5)NQGSR 175.27 4.66E-05 5586500 32010 34384 26828 32565 28664 30432 30981 28574 20870 27274 TRUE FALSE 34460.71021 32676.54056 27722.43213 29904.33533 27538.50733 31590.11108 26913.15749 32308.71991 22685.23488 26384.05161 1.306118966 1.238495931 1.050726876 1.133424683 1.043755817 1.197318424 1.020054004 1.224554908 0.859808615 1 14.68737851 -1.522878745 0.517162381 1.059175687 10.33144369 0.406796593 0.099498973 118.1452632 1.195824065 0.049656063 1200.003381 0.03 1.522878745 9.272268004 DLYPFTVNTS(ph)NQGSR ddPTM_A459_MK2206_30min_R1 1 DLYPFTVNTSNQGSR 15 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 DLYPFTVNT(0.228)S(0.751)NQGS(0.021)R 139.21 0.00039448 7241700 4147.5 3608.4 3979.1 3252.8 3368.3 3801.6 4485.5 3137.3 4090.7 4772.6 TRUE FALSE 3794.733346 3373.492504 3709.009778 3503.33122 3234.133479 4016.843307 4186.280479 3109.870917 4515.942904 5363.865719 0.707462406 0.628929336 0.691480729 0.653135519 0.602948256 0.748870967 0.780459597 0.57978165 0.841919455 1 12.38905741 -8.516725928 4.599846385 0.999625727 0.676901461 0.757596009 0.059230685 0.07473023 5.250636702 0.057162514 0.01490592 3.04E-09 8.516725928 -0.322724266 DMAECSTPLPEDCS(ph)PTHSPR ddPTM_A459_MK2206_30min_R1 2 DMAECSTPLPEDCSPTHSPR 20 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 DMAECSTPLPEDCS(0.995)PT(0.005)HSPR;DMAECSTPLPEDCS(0.911)PT(0.088)HS(0.002)PR 158.75 8.07E-07 30093000 8870 7866.5 8146.4 7633 8844.3 7198.4 8295.9 7641 6272.9 6706.6 TRUE FALSE 8115.559922 7354.38942 7593.445065 8220.894983 8492.012803 7605.967187 7742.495648 7574.195543 6924.990403 7537.46424 1.076696308 0.975711351 1.00742701 1.090671175 1.126640543 1.009088328 1.027201642 1.004873164 0.918742721 1 12.87986354 -7.838353238 2.018845209 0.960168104 1.046704131 0.355402676 0.045852248 0.402412248 3.154792298 0.036726809 0.014119244 1.45E-08 7.838353238 0.086536027 DMDEPS(ph)PVPNVEEVTLPK ddPTM_A459_MK2206_30min_R1 5 DMDEPSPVPNVEEVTLPK 18 0 Q8TAQ2;F8VXC8;Q8TAQ2-2;Q8TAQ2-3 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 1 DMDEPS(0.997)PVPNVEEVT(0.003)LPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(0.999)PVPNVEEVT(0.001)LPK;DMDEPS(1)PVPNVEEVTLPK 201.14 1.43E-10 99027300 31235.4 32185.6 31028 24209.4 26927.6 25227 30631.1 26246.4 31298.8 31176.3 TRUE FALSE 28578.66521 30090.31159 28921.90581 26074.01218 25855.01667 26655.33094 28587.75521 26016.93049 34552.42226 35038.65541 0.815632474 0.858774723 0.825428529 0.744149907 0.737899796 0.760740691 0.815891902 0.742520801 0.986122951 1 15.09665979 -8.27071987 24.58958562 0.993061549 0.788200067 0.815327379 0.039106969 259.1198715 686553.8912 0.039775457 0.010857469 5.36E-09 8.27071987 -0.204861481 DMDEPS(ph)PVPNVEEVTLPK ddPTM_A459_MK2206_30min_R2 10 DMDEPSPVPNVEEVTLPK 18 0 Q8TAQ2;F8VXC8;Q8TAQ2-2;Q8TAQ2-3 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 1 DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK 152.89 0.0003158 51870500 407251.5 420534.9 410249.3 428462.5 390730.3 324715.9 432448 351013 299073.9 409227.9 TRUE FALSE 438430.988 399651.7484 423926.8069 393455.7432 375388.2652 337073.1911 375667.0581 396891.6043 325086.8072 395874.8271 1.107499032 1.009540696 1.070860731 0.993889271 0.9482499 0.851464069 0.948954145 1.002568431 0.821185852 1 18.59468481 -6.063372472 2.318766805 0.925060928 1.058029528 0.515384083 0.05824033 0.247203885 2.632788195 0.01800169 0.026449025 8.64E-07 6.063372472 0.132968601 DMDLWEQQEEER ddPTM_A459_MK2206_30min_R2 1 DMDLWEQQEEER 12 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 124.21 0.031874 0 4476.1 5774.2 5766.2 5040.5 4942.5 5258.4 5917.5 4651.6 4768 5247.3 FALSE TRUE 4818.793658 5487.461624 5958.44223 4628.675026 4748.432616 5458.512097 5140.525142 5259.580091 5182.712021 5076.081031 0.949313777 1.081042952 1.173827249 0.911859956 0.935452485 1.075339827 1.012695643 1.03614975 1.021006558 1 12.30949938 -5.76913496 24.99991896 1.001547952 1.069359494 0.181499674 0.067097985 313.7053341 1019108.345 0.019708063 0.029864641 1.70E-06 5.76913496 0.067811542 DMES(ph)PTK ddPTM_A459_MK2206_30min_R1 2 DMESPTK 7 0 E7EVA0;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMES(0.924)PT(0.076)K;DMES(0.94)PT(0.06)K 116.37 0.012368 52152000 8351.7 8849.4 7357.6 6597.8 5130.5 5092.9 7573.9 6420.6 4365.6 10421.4 TRUE FALSE 7641.344058 8273.302452 6858.186611 7105.963699 4926.141321 5381.255597 7068.65895 6364.465371 4819.419742 11712.48171 0.65241033 0.706366307 0.585545129 0.606700089 0.42058903 0.459446233 0.603515047 0.543391702 0.411477248 1 13.51575917 -10.95061228 6.473400936 1.000087733 0.555702261 0.674334951 0.092899276 0.000127753 1.13E-05 0.097692008 0.023689155 1.12E-11 10.95061228 -0.444385472 DMES(ph)PTKLDVTLAK ddPTM_A459_MK2206_30min_R1 3 DMESPTKLDVTLAK 14 1 E7EVA0;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMES(0.906)PT(0.094)KLDVTLAK;DMES(0.972)PT(0.018)KLDVT(0.01)LAK;DMES(0.956)PT(0.041)KLDVT(0.003)LAK 128.06 0.0091965 561568000 11407.6 23953.4 12699.4 13508.3 8885.7 8083.5 9556.3 9448.4 11022.6 10394.7 TRUE FALSE 10437.32372 22394.02931 11837.40011 14548.71161 8531.763753 8541.180784 8918.816663 9365.793635 12168.43871 11682.47391 0.89341725 1.916891018 1.01326142 1.245345097 0.730304541 0.731110623 0.763435616 0.801696088 1.041597765 1 13.5120582 -5.951009451 1.856470314 0.828277499 1.370746142 0.344279692 0.274914551 0.329095416 2.295757345 0.084109306 0.142533811 1.12E-06 5.951009451 0.542468642 DMES(ph)PTKLDVTLAK ddPTM_A459_MK2206_30min_R2 3 DMESPTKLDVTLAK 14 1 E7EVA0;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMES(0.929)PT(0.009)KLDVT(0.062)LAK;DMES(0.95)PT(0.05)KLDVTLAK;DMES(0.818)PT(0.182)KLDVTLAK 119.96 0.01014 1046100000 686638 894738 686338 663452 698541 461354 855735 684088 555602 778275 TRUE FALSE 739207.5332 850306.612 709220.1664 609245.8493 671112.7705 478911.1498 743375.9666 773500.6504 603927.2577 752879.9505 0.981839844 1.129405307 0.942009634 0.809220446 0.891394133 0.636105596 0.987376495 1.027389094 0.802156117 1 19.52206031 -5.482355362 5.871820776 0.874924841 1.053061362 0.273747012 0.113762171 0.251331961 23.07022029 0.030684565 0.06282711 3.29E-06 5.482355362 0.178136521 DMESPT(ph)KLDVTLAK ddPTM_A459_MK2206_30min_R1 1 DMESPTKLDVTLAK 14 1 E7EVA0;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMES(0.402)PT(0.598)KLDVTLAK 183.23 0.0056885 17401000 3972.1 4566.8 4275.8 3994.3 2846.6 2351.3 3109.1 3069.1 4036.3 2990.5 TRUE FALSE 3634.252037 4269.50049 3985.570609 4301.941678 2733.213894 2484.428574 2901.697612 3042.267182 4455.887829 3360.985717 1.081305409 1.270312 1.185833843 1.279964284 0.813217944 0.739196409 0.863347201 0.905171113 1.325768154 1 11.7146687 -6.256913515 24.99189986 0.922390858 1.207742325 0.402587219 0.156075401 389.0231567 2148190.031 0.048557847 0.060553546 5.53E-07 6.256913515 0.285351467 DMHSAYK ddPTM_A459_MK2206_30min_R2 1 DMHSAYK 7 0 P08621;P08621-2 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 0 127.84 0.0073115 1799300 36015 35953 34894 40256 46718 34330 44013 67800 48678 46753 FALSE TRUE 38772.33609 34167.6263 36057.34854 36966.95603 44883.61658 35636.45221 38234.04023 76661.69279 52911.92445 45227.45344 0.857274358 0.755462086 0.797244722 0.817356566 0.992397607 0.787938509 0.845372386 1.695025631 1.169907223 1 15.46491115 -7.685383252 12.08038853 1.324095519 0.834566214 0.584858883 0.173791903 0.360668202 55.82356328 0.076481424 0.044127881 2.06E-08 7.685383252 -0.489529305 DMHYAKIS(ph)S(ph)MENK ddPTM_A459_MK2206_30min_R1 1 DMHYAKISSMENK 13 1 H3BU64;A5PLK6-6;A5PLK6 H3BU64 RGSL1 Regulator of G-protein signaling protein-like 2 DMHYAKIS(1)S(1)MENK 84.213 0.020932 0 480.3 394.52 764.09 523.01 875.2 597.45 579.49 590.18 575.9 492.79 TRUE FALSE 439.4479628 368.8366763 712.2256997 563.2923208 840.3389307 631.2771027 540.8332794 585.0201185 635.7668659 553.8405456 0.793455745 0.665961854 1.285976091 1.017065878 1.517293989 1.139817422 0.976514421 1.056297021 1.147924021 1 9.113326864 -5.255151216 24.98039016 1.147487689 0.72970876 0.531342432 0.155058768 376.7647744 1496727.293 0.04045675 0.10153874 5.56E-06 5.255151216 -0.41777893 DMLGSLRDS(ph)ALFVK ddPTM_A459_MK2206_30min_R1 2 DMLGSLRDSALFVK 14 1 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DMLGS(0.001)LRDS(0.999)ALFVK;DMLGS(0.001)LRDS(0.999)ALFVK 71.286 0.030345 24514000 5950.1 8333.1 6600.2 7552.7 8173.6 8351.9 8155.5 7298.4 6673.1 5272.1 TRUE FALSE 5444.01275 7790.613675 6152.196813 8134.410263 7848.028204 8824.77736 7611.461476 7234.590858 7366.792625 5925.24755 0.91878233 1.314816573 1.038302073 1.372838889 1.324506383 1.489351674 1.284581178 1.22097698 1.243288582 1 12.53265971 -4.756808893 24.90263461 1.268642016 0.918781775 0.339829149 0.139002345 150.8421221 811121.272 0.034280855 0.268282588 1.75E-05 4.756808893 -0.349860241 DMNS(ph)PTDRHPDGYLAR ddPTM_A459_MK2206_30min_R2 1 DMNSPTDRHPDGYLAR 16 1 Q7Z6B7;Q7Z6B7-2;G5EA48 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 DMNS(0.907)PT(0.092)DRHPDGY(0.001)LAR 54.511 0.040712 6854500 25462 31066 28878 36265 32055 32207 35205 24378 28938 28765 TRUE FALSE 27411.3903 29523.30761 29840.77811 33302.03349 30796.35964 33432.65995 30582.54121 27564.2883 31454.97493 27826.40041 0.985085742 1.060981916 1.072390883 1.196778347 1.106731708 1.201472683 1.099047694 0.990580452 1.130400428 1 14.76416667 -10.71819225 13.2387089 1.000000003 1.095835095 0.141333724 0.069123797 0 0 0.070086051 0.016998364 1.91E-11 10.71819225 0.095835093 DMPGGFLFEGLS(ph)DDEDDFHPNTR ddPTM_A459_MK2206_30min_R1 11 DMPGGFLFEGLSDDEDDFHPNTR 23 0 H3BUV9;Q96S82 H3BUV9 UBL7 Ubiquitin-like protein 7 1 DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR 212.09 2.41E-24 44470800 11136.17 10958.04 11684.97 9566.82 12465.7 10467.6 11275.37 10580.01 8920.86 9257.78 TRUE FALSE 10188.98026 10244.6696 10891.82679 10303.65813 11969.16477 11060.26647 10523.21064 10487.51009 9848.215321 10404.70368 0.979266741 0.984619065 1.046817586 0.990288475 1.150360947 1.063006387 1.011389749 1.007958555 0.946515694 1 13.34494826 -7.847868406 2.392678758 0.974967088 1.036242041 0.185184724 0.048891505 0.529673748 5.935790859 0.036918142 0.014736414 1.42E-08 7.847868406 0.061274953 DMPGGFLFEGLS(ph)DDEDDFHPNTR ddPTM_A459_MK2206_30min_R2 4 DMPGGFLFEGLSDDEDDFHPNTR 23 0 H3BUV9;Q96S82 H3BUV9 UBL7 Ubiquitin-like protein 7 1 DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR 108.38 3.38E-05 6097900 27221.2 35045.2 26949.8 39974.2 33216.3 38880.6 37691.4 28403.7 27431.4 32458.2 TRUE FALSE 29305.276 33304.90633 27848.29288 36708.17999 31912.06116 40360.22848 32742.4739 32116.16111 29817.33359 31399.09159 0.933316046 1.060696493 0.886913967 1.16908414 1.016337083 1.285394782 1.042784114 1.02283727 0.949624084 1 14.9384352 -2.370129535 20.36801341 1.044028105 0.307119597 0 0.110988611 0 0 0.025374134 0 0.004264523 2.370129535 -0.736908508 DMQPLS(ph)PISVHER ddPTM_A459_MK2206_30min_R1 4 DMQPLSPISVHER 13 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 DMQPLS(0.995)PIS(0.005)VHER;DMQPLS(1)PISVHER;DMQPLS(0.999)PIS(0.001)VHER;DMQPLS(1)PISVHER 108.49 0.00414 64917400 10025.7 5257.56 6991.06 4524.89 14040.2 12565.6 12228.7 9287.4 5457.66 4831.35 TRUE FALSE 9172.961568 4915.291888 6516.526325 4873.397812 13480.9491 13277.05341 11412.94574 9206.201241 6025.003287 5429.894113 1.689344466 0.905227945 1.200120332 0.897512495 2.482727807 2.445177224 2.101872615 1.695466072 1.10959867 1 12.40670835 -6.244097477 24.95538797 1.887352189 1.155854557 0.264567687 0.505658017 1015.688063 1461597.611 0.154057276 0.198412614 5.70E-07 6.244097477 -0.731497631 DMQPLS(ph)PISVHER ddPTM_A459_MK2206_30min_R2 5 DMQPLSPISVHER 13 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 DMQPLS(0.998)PIS(0.002)VHER;DMQPLS(1)PISVHER;DMQPLS(1)PISVHER;DMQPLS(1)PISVHER;DMQPLS(0.997)PIS(0.003)VHER 124.45 0.0014926 69453000 111207.6 224821 170955 352853 362161 390439 311216 213651 301711 182448 TRUE FALSE 119721.7394 213656.7161 176654.5544 324023.7812 347940.7394 405297.4297 270352.9654 241575.9193 327953.2774 176494.7367 0.678330366 1.210555737 1.00090551 1.835883535 1.971394422 2.296371197 1.531790525 1.368742909 1.858147634 1 17.42926564 -5.756337698 24.85621658 1.739803764 0.987992796 0.467609951 0.355034551 102.0633307 497261.0246 0.098395548 0.163939248 1.75E-06 5.756337698 -0.751810968 DMS(ph)PLSETEMALGK ddPTM_A459_MK2206_30min_R1 9 DMSPLSETEMALGK 14 0 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMS(0.998)PLSET(0.002)EMALGK;DMS(0.978)PLS(0.011)ET(0.011)EMALGK;DMS(0.999)PLS(0.001)ETEMALGK;DMS(0.981)PLS(0.017)ET(0.001)EMALGK;DMS(1)PLSETEMALGK;DMS(0.691)PLS(0.309)ETEMALGK;DMS(1)PLSETEMALGK;DMS(1)PLSETEMALGK;DMS(1)PLSETEMALGK 321.67 1.60E-109 248791700 33731.5 34179.6 32668 28624.9 27718.5 27298.8 27900.9 24692.3 33841.5 29536.3 TRUE FALSE 30862.45879 31954.50183 30450.58718 30829.59476 26614.41345 28844.43446 26039.68187 24476.41782 37359.44503 33195.47983 0.929718713 0.962616055 0.917311252 0.928728698 0.801748117 0.868926571 0.784434568 0.73734189 1.125437717 1 15.01869919 -6.041280936 21.83887441 0.867038383 0.936466242 0.029181967 0.106515829 295.5377581 156347.5726 0.03067886 0.039617066 9.09E-07 6.041280936 0.069427859 DMS(ph)PLSETEMALGK ddPTM_A459_MK2206_30min_R2 6 DMSPLSETEMALGK 14 0 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMS(1)PLSETEMALGK;DMS(1)PLSETEMALGK;DMS(1)PLSETEMALGK;DMS(1)PLSETEMALGK;DMS(0.989)PLS(0.008)ET(0.003)EMALGK;DMS(0.998)PLS(0.002)ETEMALGK 284.91 4.02E-55 61320080 112543.5 115024 111019.7 113201.5 103495.9 87611.1 130500.1 100206.3 83471.7 115529.5 TRUE FALSE 121159.9169 109312.0754 114721.0414 103952.5753 99432.13094 90945.2018 113365.2801 113303.6075 90731.91758 111759.7819 1.084110177 0.978098504 1.026496647 0.930142969 0.889695106 0.813756078 1.014365617 1.013813785 0.811847662 1 16.77004158 -5.77698557 5.965064434 0.922595175 1.024945971 0.299877034 0.07324785 0.21236095 25.76587695 0.020913746 0.033038781 1.67E-06 5.77698557 0.102350796 DMS(ph)PPFICEETDEQK ddPTM_A459_MK2206_30min_R1 2 DMSPPFICEETDEQK 15 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 DMS(1)PPFICEETDEQK;DMS(1)PPFICEETDEQK 239.75 4.57E-20 9904500 3563.3 3654.1 3333.2 2913.76 2116.95 2227.67 2843.19 3176.11 3824.4 3999.7 TRUE FALSE 3260.222623 3416.217426 3106.951671 3138.1783 2032.627399 2353.79875 2653.525983 3148.341605 4221.960066 4495.213032 0.725265432 0.759967859 0.69116895 0.69811559 0.452175989 0.523623404 0.590300385 0.700376508 0.939212455 1 12.13417377 -8.252482891 2.84464204 0.996770266 0.632750599 0.690151187 0.088967634 0.170865517 2.569941805 0.093283326 0.026999894 5.59E-09 8.252482891 -0.364019667 DMS(ph)PPFICEETDEQK ddPTM_A459_MK2206_30min_R2 1 DMSPPFICEETDEQK 15 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 DMS(0.999)PPFICEET(0.001)DEQK 83.856 0.022691 2710500 12856 10344 14547 9187.2 10541 7425.6 11257 8466.3 5552.9 13396 TRUE FALSE 13840.26524 9830.332002 15031.98972 8436.576372 10127.10738 7708.186411 9778.942378 9572.874479 6035.881205 12958.88962 1.068013206 0.758578265 1.159975134 0.651026177 0.781479562 0.594818433 0.754612676 0.738711013 0.465771481 1 13.66165449 -5.780982029 24.99999623 0.701203276 0.971827863 0.390020894 0.161050706 229.3706285 293422.3241 0.042311098 0.062857636 1.66E-06 5.780982029 0.270624586 DMSLYASLT(ph)SEK ddPTM_A459_MK2206_30min_R1 1 DMSLYASLTSEK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DMS(0.094)LYAS(0.018)LT(0.886)S(0.002)EK 133.88 0.0039274 4355300 2332.1 1892.1 2034.7 2148.2 2244.5 1617.3 2023.4 1929.8 2143.5 1850.2 TRUE FALSE 2133.742649 1768.923946 1896.590233 2313.654736 2155.096812 1708.870128 1888.422678 1912.927962 2366.324496 2079.416744 1.026125549 0.850682746 0.912077984 1.112646006 1.036394854 0.82180262 0.908150174 0.919934865 1.137975109 1 11.02196321 -8.248917318 24.91631594 1.06898756 0.946839957 0.225736968 0.089233528 996.2132643 1982269.446 0.064337394 0.023953025 5.64E-09 8.248917318 -0.122147603 DMSPLSETEMALGKDVT(ph)PPPETEVVLIK ddPTM_A459_MK2206_30min_R1 3 DMSPLSETEMALGKDVTPPPETEVVLIK 28 1 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMS(0.084)PLS(0.074)ET(0.069)EMALGKDVT(0.769)PPPET(0.004)EVVLIK;DMS(0.06)PLS(0.21)ET(0.192)EMALGKDVT(0.536)PPPET(0.003)EVVLIK;DMS(0.02)PLS(0.019)ET(0.019)EMALGKDVT(0.935)PPPET(0.006)EVVLIK 50.783 0.023853 9562600 2413.02 2778.29 2835.72 2852.01 2670.91 2252.67 2439.52 2249.27 1744.63 1298.99 TRUE FALSE 2207.779978 2597.422816 2643.239227 3071.672304 2564.521999 2380.214229 2276.784072 2229.60487 1925.990532 1459.918688 1.51226229 1.77915581 1.810538661 2.104002318 1.756619749 1.630374519 1.559528 1.527211678 1.31924507 1 10.5116723 -8.238328398 0.713837742 1.006108848 1.802811312 0.754437655 0.140977373 0.337811057 0.383401424 0.146463107 0.061234441 5.78E-09 8.238328398 0.796702464 DMSPLSETEMALGKDVT(ph)PPPETEVVLIK ddPTM_A459_MK2206_30min_R2 3 DMSPLSETEMALGKDVTPPPETEVVLIK 28 1 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMS(0.002)PLS(0.125)ET(0.139)EMALGKDVT(0.698)PPPET(0.036)EVVLIK;DMS(0.003)PLS(0.009)ET(0.012)EMALGKDVT(0.971)PPPET(0.005)EVVLIK;DMS(0.006)PLS(0.017)ET(0.057)EMALGKDVT(0.918)PPPET(0.003)EVVLIK 57.662 0.0035726 12052800 32503.8 56023 45955 47528 53111 43339 50256 42953 45106 44043 TRUE FALSE 34992.31592 53240.97929 47487.11676 43644.81037 51025.59528 44988.29601 43657.32683 48567.10458 49029.23835 42605.88052 0.821302494 1.249615749 1.114567196 1.024384659 1.197618607 1.055917528 1.024678432 1.139915523 1.150762236 1 15.37876495 -4.742426474 24.99073432 1.107170669 0.821301544 0.55237353 0.076986719 989.5982074 1300668.818 0.018676414 0.670071236 1.81E-05 4.742426474 -0.285869125 DNDFIYHDR ddPTM_A459_MK2206_30min_R1 3 DNDFIYHDR 9 0 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 0 ;; 121.36 0.0058664 38809000 22854 24589.9 25198.7 19327.8 22293.1 22086.2 25907.9 21479.4 23155.5 21902.9 FALSE TRUE 20910.14729 22989.09304 23488.28245 20816.4305 21405.11862 23336.70156 24179.63126 21291.60787 25562.59709 24616.39661 0.849439811 0.93389351 0.954172246 0.845632723 0.869547195 0.948014526 0.982257137 0.86493601 1.038437814 1 14.58733197 -6.877829143 5.906844106 0.960711271 0.894213847 0.344442406 0.05234127 0.293040044 14.0360344 0.018474056 0.016300541 1.32E-07 6.877829143 -0.066497424 DNDFIYHDR ddPTM_A459_MK2206_30min_R2 2 DNDFIYHDR 9 0 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 0 ; 107.03 0.018023 29235000 231708 271740 245478 290139 255474 247098 279904 236242 238933 257804 FALSE TRUE 249447.7426 258245.7867 253662.114 266433.7156 245442.8071 256501.4875 243152.2686 267119.6405 259714.9604 249391.8766 1.000224009 1.035501999 1.0171226 1.068333577 0.984165204 1.028507789 0.974980709 1.071083967 1.041393024 1 17.92805495 -7.783636052 24.99998834 1.042178832 1.017697621 0.093347611 0.029778944 531.3855076 598487.7077 0.015588733 0.007496727 1.65E-08 7.783636052 -0.024481211 DNEESEQPPVPGT(ph)PTLR ddPTM_A459_MK2206_30min_R1 3 DNEESEQPPVPGTPTLR 17 0 A0A2R8YDC1;A0A2R8Y6V8;O15439-4;O15439-3;O15439-2;O15439 A0A2R8YDC1 ABCC4 Multidrug resistance-associated protein 4 1 DNEESEQPPVPGT(0.889)PT(0.111)LR;DNEESEQPPVPGT(1)PTLR;DNEESEQPPVPGT(0.962)PT(0.038)LR 267.6 4.38E-51 22435300 3973.6 3936.1 3206.55 3123 3795.05 2948.42 4032.6 4524.7 4424 4526.3 TRUE FALSE 3635.624454 3679.859175 2988.89832 3363.534001 3643.885122 3115.356992 3763.592612 4485.141025 4883.890631 5087.052216 0.714681961 0.723377512 0.587550155 0.661195101 0.716305823 0.612409085 0.739837622 0.881677804 0.960063004 1 12.31261419 -7.840409873 1.908217041 0.982585029 0.668654523 0.897117717 0.042964689 0.105814229 0.734628287 0.034175926 0.012947874 1.44E-08 7.840409873 -0.313930506 DNEESEQPPVPGT(ph)PTLR ddPTM_A459_MK2206_30min_R2 3 DNEESEQPPVPGTPTLR 17 0 A0A2R8YDC1;A0A2R8Y6V8;O15439-4;O15439-3;O15439-2;O15439 A0A2R8YDC1 ABCC4 Multidrug resistance-associated protein 4 1 DNEESEQPPVPGT(0.996)PT(0.004)LR;DNEESEQPPVPGT(1)PTLR;DNEESEQPPVPGT(0.988)PT(0.012)LR 314.02 4.50E-103 29072900 68118 41221 42368 44639 42349 51690 76086 32893.7 64489 58062 TRUE FALSE 73333.16645 39174.02508 43780.52797 40991.85091 40686.16547 53657.09917 66095.8168 37193.01953 70098.13665 56167.4417 1.305616995 0.697450763 0.77946452 0.729815168 0.724372773 0.955306091 1.176763883 0.662181121 1.24802082 1 15.77744647 -6.954278113 9.304874588 1.003875548 0.829522427 0.121520368 0.217688986 0.720358604 138.6628746 0.074488814 0.065607164 1.11E-07 6.954278113 -0.174353121 DNFTLIPEGTNGTEER ddPTM_A459_MK2206_30min_R1 1 DNFTLIPEGTNGTEER 16 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 0 151.16 0.0028955 3623800 1147.6 1262.4 1424.4 874.52 1484.5 1278.6 1309.5 1129.7 821.05 1108.5 FALSE TRUE 1049.990594 1180.217531 1327.715697 941.8756819 1425.369222 1350.993227 1222.145644 1119.823152 906.4010857 1245.829349 0.84280451 0.947334827 1.065728382 0.756023032 1.144112733 1.084412748 0.980989608 0.898857579 0.727548349 1 10.28289075 -10.37224525 4.356689656 1.000000471 0.94767336 0.015294643 0.130728148 184933329.2 467677832.6 1566.336188 0.033210254 4.24E-11 10.37224525 -0.052327111 DNFTLIPEGTNGTEER ddPTM_A459_MK2206_30min_R2 2 DNFTLIPEGTNGTEER 16 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 0 ; 162.67 0.00052167 6220900 19172 28384 25997.2 26481.8 23356 27168 26718 23763 21167.2 25104 FALSE TRUE 20639.82306 26974.49183 26863.93367 24318.15223 22438.92609 28201.89728 23209.89451 26868.90569 23008.28479 24284.85854 0.849905015 1.110753509 1.106200954 1.001370965 0.923988338 1.161295514 0.955735215 1.106405691 0.947433347 1 14.56776946 DNFWEMGDTGPCGPCSEIHYDR ddPTM_A459_MK2206_30min_R1 1 DNFWEMGDTGPCGPCSEIHYDR 22 0 P49588;P49588-2 P49588 AARS "Alanine--tRNA ligase, cytoplasmic" 0 161.46 3.80E-09 7636100 833.2 686.41 801.8 778 965.84 904.93 965.6 1003.2 598.08 748.46 FALSE TRUE 762.3319647 641.7245842 747.3760499 837.9216948 927.3685476 956.1663546 901.1865858 994.4291282 660.2525563 841.1848754 0.906259714 0.762881743 0.888480133 0.996120733 1.10245509 1.136689903 1.071329992 1.182176662 0.784907784 1 9.7162791 -5.784062894 2.680308349 1.060401712 0.833265961 0.397812562 0.106497016 0.240010521 3.517275447 0.030420011 0.053638105 1.64E-06 5.784062894 -0.227135751 DNGNGTYSCSYVPR ddPTM_A459_MK2206_30min_R1 2 DNGNGTYSCSYVPR 14 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 ; 174.94 1.07E-08 3767400 1171.31 1351.75 1317.05 1250.45 1317.94 1061.15 1197.8 1251.93 1055.63 1338.52 FALSE TRUE 1071.683934 1263.750829 1227.652316 1346.759876 1265.443659 1121.231396 1117.896948 1240.984508 1165.366516 1504.345963 0.712391937 0.840066621 0.816070469 0.895246113 0.841191913 0.745328152 0.743111608 0.82493292 0.774666563 1 10.55492067 -10.54659437 4.848133537 1.000003651 0.80249902 0.564744153 0.052808387 2.18E-06 4.40E-07 0.053591152 0.012997523 2.84E-11 10.54659437 -0.197504631 DNGNGTYSCSYVPR ddPTM_A459_MK2206_30min_R2 1 DNGNGTYSCSYVPR 14 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 240.18 2.17E-18 5851900 4754.7 7162.2 6700.1 6786.1 7870.8 8248.4 5701.4 4677.7 6287.9 4248.5 FALSE TRUE 5118.723488 6806.535563 6923.47799 6231.653922 7561.752844 8562.298642 4952.799331 5289.091451 6834.810176 4109.871793 1.245470357 1.656143039 1.684597072 1.516264798 1.839899935 2.083349329 1.205098256 1.286923709 1.663022722 1 12.00487767 -10.67456032 5.810264283 0.999993136 1.582781876 0.302298183 0.262153545 2.45E-05 3.57E-06 0.266469684 0.064627631 2.12E-11 10.67456032 0.58278874 DNHLHFYQDR ddPTM_A459_MK2206_30min_R1 1 DNHLHFYQDR 10 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 0 129.88 0.001621 3169700 3207.2 2734.5 3081.1 2414.1 3489.8 2921.8 3220.7 2876 2504.5 2346.8 FALSE TRUE 2934.410798 2556.483553 2871.963516 2600.0344 3350.793876 3087.229791 3005.852979 2850.855435 2764.851737 2637.539301 1.112556236 0.969268421 1.088879895 0.985780344 1.270424245 1.170496223 1.139642916 1.08087695 1.048269399 1 11.36497688 -4.459245054 22.43342635 1.090554139 1.701421105 0.004262177 0.087707455 1045.07042 1604074.912 0.022111114 170190.3844 3.47E-05 4.459245054 0.610866967 DNIQGITKPAIR ddPTM_A459_MK2206_30min_R1 2 DNIQGITKPAIR 12 1 P62805 P62805 HIST1H4A Histone H4 0 ; 135.1 0.0042788 100271000 9013.2 7991.2 8624 9375 7992.5 8362.1 8481.1 8389.5 8074.6 12366.3 FALSE TRUE 8246.58001 7470.971428 8038.626908 10097.06412 7674.141801 8835.554876 7915.341294 8316.151486 8913.983565 13898.3306 0.593350399 0.537544518 0.578387947 0.726494743 0.552162847 0.635727781 0.569517413 0.598356142 0.641370811 1 13.76262398 -8.928251803 2.250631596 0.999988871 0.599292603 0.851464813 0.049936028 1.229320836 6.425672322 0.048248919 0.013139409 1.18E-09 8.928251803 -0.400696268 DNLAEDIMR ddPTM_A459_MK2206_30min_R1 4 DNLAEDIMR 9 0 P08670;B0YJC4 P08670 VIM Vimentin 0 ;;; 174.86 0.0045359 65091300 18916.1 18450.6 17061.9 15248.6 18965.9 16704.5 17453 16536.4 14357.7 14791.7 FALSE TRUE 17307.18636 17249.46259 15903.78577 16423.04981 18210.44804 17650.29435 16288.74221 16391.824 15850.23429 16624.20747 1.041083396 1.037611123 0.956664298 0.987899715 1.095417516 1.061722454 0.979820677 0.986021381 0.953443003 1 14.02099794 -7.324740636 12.05622965 0.978621138 1.028122035 0.304305708 0.03713073 1.848131799 349.5177283 0.017252221 0.011628755 4.73E-08 7.324740636 0.049500898 DNLAEDIMR ddPTM_A459_MK2206_30min_R2 1 DNLAEDIMR 9 0 P08670;B0YJC4 P08670 VIM Vimentin 0 162.64 0.013081 20936000 106250 146430 118130 141170 130580 129800 143220 91483 112810 120220 FALSE TRUE 114384.5817 139158.4991 122068.3952 129635.9594 125452.7731 134739.63 124415.042 103440.1422 122622.0099 116297.2312 0.983553783 1.196576201 1.04962426 1.114695148 1.078725364 1.158579861 1.06980227 0.889446302 1.054384602 1 16.82745722 -7.54746289 19.1133281 0.979072133 1.100552791 0.380108857 0.066097879 15.04830027 11697.12403 0.028412059 0.016409205 2.83E-08 7.54746289 0.121480659 DNLGEVPLT(ph)PTEEASLPLAVTK ddPTM_A459_MK2206_30min_R1 2 DNLGEVPLTPTEEASLPLAVTK 22 0 H7C3Y7;H0Y764;A0A494C1V1;Q6ZNJ1-2;Q6ZNJ1-3;Q6ZNJ1 H7C3Y7 NBEAL2 Neurobeachin-like protein 2 1 DNLGEVPLT(0.627)PT(0.371)EEAS(0.001)LPLAVTK;DNLGEVPLT(0.721)PT(0.272)EEAS(0.007)LPLAVTK 100.57 0.00017942 4796700 4742.2 4425.1 4570.7 3918.8 4447.5 3412.8 3249.7 3624.2 3889.2 3048.5 TRUE FALSE 4338.850988 4137.025186 4260.453619 4220.626655 4270.346657 3606.029787 3032.918442 3592.514001 4293.496258 3426.171195 1.26638476 1.207477662 1.243502842 1.231878507 1.246390333 1.052495506 0.885220927 1.048550641 1.25314703 1 11.74238152 -6.774932791 7.692356595 1.040234722 1.237394446 0.555124739 0.085471433 0.118975666 38.53879748 0.030855417 0.028216946 1.68E-07 6.774932791 0.197159724 DNLLDTYSADQGDS(ph)SEGGTLAR ddPTM_A459_MK2206_30min_R2 1 DNLLDTYSADQGDSSEGGTLAR 22 0 Q6ZRP7 Q6ZRP7 QSOX2 Sulfhydryl oxidase 2 1 DNLLDTYSADQGDS(0.78)S(0.22)EGGTLAR 201.61 3.08E-28 0 8948 6428.2 3344.4 4035.7 6555.2 6322 8682 4090.8 5327.4 5646.8 TRUE FALSE 9633.06576 6108.984935 3455.900627 3705.9704 6297.809911 6562.58814 7542.042971 4625.481606 5790.767622 5462.545378 1.76347565 1.118340355 0.632653898 0.678432881 1.152907569 1.201379153 1.380682896 0.846763054 1.060085953 1 12.41535764 DNLTLWTSDQQDDDGGEGNN ddPTM_A459_MK2206_30min_R1 4 DNLTLWTSDQQDDDGGEGNN 20 0 P61981 P61981 YWHAG "14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed" 0 ;;; 283.05 5.10E-71 106758600 25502.4 24830.8 25703.8 21238.3 27708.9 23842.8 26838.9 24918.9 20634 20101.2 FALSE TRUE 23333.28696 23214.31041 23959.09767 22874.07755 26605.19584 25192.75873 25048.52595 24701.03668 22778.97814 22591.48841 1.032835311 1.027568878 1.060536483 1.012508655 1.177664586 1.115143822 1.108759436 1.093378012 1.008299131 1 14.4634917 DNLTLWTSDQQDDDGGEGNN ddPTM_A459_MK2206_30min_R2 5 DNLTLWTSDQQDDDGGEGNN 20 0 P61981 P61981 YWHAG "14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed" 0 ;;;; 269.78 8.55E-58 43626900 331409 420617 371790 428233 388468 390149 420064 321038 364796 381729 FALSE TRUE 356781.9279 399729.7714 384185.293 393244.9941 373214.7944 404996.3936 364909.0922 362998.7689 396525.2967 369273.214 0.966173322 1.082477029 1.040382239 1.064916109 1.010673887 1.096739157 0.988181862 0.983008664 1.07379924 1 18.49432909 -10.31141698 4.970815044 0.999999967 1.03486569 0.052478877 0.043262989 1.53E-08 3.75E-09 0.040302846 0.009774867 4.88E-11 10.31141698 0.034865724 DNLTLWTSDQQDEEAGEGN ddPTM_A459_MK2206_30min_R1 2 DNLTLWTSDQQDEEAGEGN 19 0 Q04917 Q04917 YWHAH 14-3-3 protein eta 0 ; 201.48 2.23E-14 7595400 8842.5 8702.9 8851 7634.4 8918.6 7078.2 8457.7 8326.5 7282.4 6798 FALSE TRUE 8090.398941 8136.339628 8250.21878 8222.402811 8563.353277 7478.961567 7893.502265 8253.702288 8039.43154 7640.187562 1.058926744 1.064939776 1.079845058 1.076204314 1.120830242 0.978897639 1.033155561 1.080301003 1.052255782 1 12.89939234 -6.750611977 24.99999708 1.0342054 1.079068185 0.415112329 0.03006469 260.0031191 600335.0379 0.010443072 0.010345277 1.78E-07 6.750611977 0.044862785 DNLTLWTSENQGDEGDAGEGEN ddPTM_A459_MK2206_30min_R1 2 DNLTLWTSENQGDEGDAGEGEN 22 0 P31946-2;P31946 P31946-2 YWHAB "14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed" 0 ; 286.88 8.25E-91 19009100 22026.2 21933.9 22229.8 18953.6 23364.9 20414.4 22553.3 21752.3 18639.5 17172.5 FALSE TRUE 20152.75603 20505.99912 20720.90311 20413.40956 22434.22656 21570.24569 21048.81051 21562.12193 20577.14273 19299.95895 1.044186471 1.062489261 1.073624207 1.057691864 1.162397631 1.117631688 1.090614263 1.117210767 1.066175466 1 14.23631016 -3.356896925 12.65302423 1.08493679 1.033715641 0 0.043294304 0 0 0.009927692 0 0.000439646 3.356896925 -0.051221149 DNLTLWTSENQGDEGDAGEGEN ddPTM_A459_MK2206_30min_R2 4 DNLTLWTSENQGDEGDAGEGEN 22 0 P31946-2;P31946 P31946-2 YWHAB "14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed" 0 ;;; 269.88 3.23E-64 35112800 191684 233589 215130 254632 235807 230366 222719 186188 219067 212548 FALSE TRUE 206359.4744 221989.3099 222302.3268 233827.7511 226548.0323 239132.7396 193475.7278 210523.4109 238121.0517 205612.5762 1.003632551 1.079648502 1.081170865 1.137224947 1.101819921 1.163025842 0.940972247 1.023883922 1.158105482 1 17.64956898 -7.247309156 24.97750358 1.03273073 1.095428727 0.193301742 0.063658466 1436.421425 2539115.203 0.024904104 0.019184906 5.66E-08 7.247309156 0.062697997 DNPAQDFSTLYGS(ph)SPLER ddPTM_A459_MK2206_30min_R2 1 DNPAQDFSTLYGSSPLER 18 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 DNPAQDFST(0.001)LYGS(0.499)S(0.499)PLER 103.41 0.0020634 1833500 2938.4 5129.8 3784.4 9393.9 5414.9 11980 4750.2 5210.9 7127 3569.5 TRUE FALSE 3163.366163 4875.061591 3910.570007 8626.38832 5202.283818 12435.90729 4126.493034 5891.982522 7746.893577 3453.027507 0.916113803 1.411822403 1.132504736 2.498210136 1.506586266 3.601450399 1.195036247 1.706323656 2.243507635 1 11.75364611 -5.740793621 24.80583512 2.010947478 1.179313948 0.214945075 0.705807107 330.5141431 397108.6006 0.18509897 0.320131436 1.82E-06 5.740793621 -0.831633529 DNPAQDFSTLYGSS(ph)PLER ddPTM_A459_MK2206_30min_R1 2 DNPAQDFSTLYGSSPLER 18 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 DNPAQDFSTLYGS(0.209)S(0.791)PLER;DNPAQDFSTLYGS(0.001)S(0.999)PLER 267.69 7.43E-54 22975000 5899.5 5478.8 5630.9 4353.3 5753.4 5185.4 5764.2 5391.6 4495.7 4732.1 TRUE FALSE 5397.716545 5122.129124 5248.690197 4688.59192 5524.229895 5478.992867 5379.680735 5344.46181 4963.044103 5318.348274 1.014923481 0.963105246 0.98690231 0.881587982 1.038711572 1.03020573 1.011532239 1.004910084 0.93319276 1 12.37676254 DNPAQDFSTLYGSS(ph)PLER ddPTM_A459_MK2206_30min_R2 2 DNPAQDFSTLYGSSPLER 18 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 DNPAQDFS(0.001)T(0.001)LY(0.038)GS(0.247)S(0.715)PLER;DNPAQDFSTLYGS(0.118)S(0.882)PLER 219.87 2.34E-14 10978000 53771 52446 44343 55567 48980 43507 58337 39811 43566 49560 TRUE FALSE 57887.7491 49841.6079 45821.37349 51026.99835 47056.7991 45162.68937 50677.28182 45014.43439 47355.29193 47942.86126 1.207432089 1.039604366 0.955749663 1.064329433 0.981518371 0.942010722 1.057034989 0.938918396 0.987744383 1 15.54902839 -4.782912718 3.102331 0.991610594 1.240416201 0.719895544 0.040476958 0.181526023 2.60227492 0.009972275 0.112121838 1.65E-05 4.782912718 0.248805607 DNPS(ph)PEPQLDDIKR ddPTM_A459_MK2206_30min_R2 2 DNPSPEPQLDDIKR 14 1 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 1 DNPS(1)PEPQLDDIKR;DNPS(1)PEPQLDDIKR 92.236 0.0081956 16167900 64353 41237 48006 49723 44834 35832 51145 41128 34631 57067 TRUE FALSE 69279.91516 39189.23054 49606.49608 45660.47184 43073.59189 37195.61187 44429.60006 46503.57081 37643.14178 55204.90846 1.254959334 0.709886705 0.898588503 0.827108913 0.780249313 0.673773635 0.804812494 0.842381087 0.681880341 1 15.75250893 -4.754810338 24.99994427 0.796342396 1.254960108 0.669626234 0.095355579 127.0831795 479222.1754 0.022407562 0.210836692 1.76E-05 4.754810338 0.458617712 DNPS(ph)PGPSR ddPTM_A459_MK2206_30min_R1 2 DNPSPGPSR 9 0 Q9NQS1 Q9NQS1 AVEN Cell death regulator Aven 1 DNPS(0.996)PGPS(0.004)R;DNPS(1)PGPSR 120.03 0.0067078 9290600 7799.5 6726 5527.6 4717.8 4416.9 4079.3 5669 4921.1 1593.84 3694.9 TRUE FALSE 7136.111568 6288.136177 5152.401913 5081.165773 4240.96552 4310.266441 5290.831354 4878.075342 1759.525372 4152.652107 1.718446762 1.51424584 1.240749714 1.223595342 1.02126675 1.037955102 1.274084902 1.174689142 0.42371124 1 12.0198173 -1.522878754 0.316954898 0.907419705 8.884529048 0.608944677 0.203878435 39.97592027 0.570733673 0.197097312 184.2423379 0.029999999 1.522878754 7.977109343 DNPS(ph)PGPSR ddPTM_A459_MK2206_30min_R2 1 DNPSPGPSR 9 0 Q9NQS1 Q9NQS1 AVEN Cell death regulator Aven 1 DNPS(1)PGPSR 124.38 0.0053289 21976000 94909 111720 98879 103570 93861 92146 93569 67228 78967 84899 TRUE FALSE 102175.306 106172.1473 102175.5765 95107.9997 90175.54553 95652.6806 81283.2779 76014.93043 85835.40692 82128.75258 1.24408691 1.292752464 1.244090203 1.158035362 1.097977781 1.164667398 0.989705497 0.925558078 1.045132237 1 16.32559977 -6.509097495 0.704588461 0.97566221 1.283925325 0.830598817 0.048561884 0.289469217 0.319699993 0.033992238 0.045688268 3.10E-07 6.509097495 0.308263114 DNQESS(ph)DAELSSSEYIK ddPTM_A459_MK2206_30min_R1 4 DNQESSDAELSSSEYIK 17 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 DNQES(0.062)S(0.937)DAELS(0.001)SSEYIK;DNQES(0.005)S(0.995)DAELSSSEYIK;DNQES(0.486)S(0.509)DAELS(0.004)S(0.001)SEYIK;DNQES(0.022)S(0.978)DAELSSSEYIK 224.99 1.14E-12 38728000 10773.23 11382.72 10864.32 8938.98 10239.58 8719.63 10638.82 9883.73 9771.5 9031.53 TRUE FALSE 9856.910216 10641.70286 10126.88023 9627.461788 9831.715846 9213.327915 9929.123729 9797.317591 10787.28239 10150.42412 0.971083582 1.048399824 0.997680502 0.94847877 0.968601482 0.907679108 0.978197917 0.965212633 1.062742036 1 13.30925239 -8.246485979 24.52897076 1.03137102 0.9735013 0.290410096 0.036389569 743.7739976 1220064.551 0.026620101 0.009947097 5.67E-09 8.246485979 -0.05786972 DNQESS(ph)DAELSSSEYIK ddPTM_A459_MK2206_30min_R2 2 DNQESSDAELSSSEYIK 17 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 DNQES(0.157)S(0.843)DAELSSSEYIK;DNQES(0.08)S(0.92)DAELSSSEYIK 261.02 2.88E-40 38511000 110554 139019 118740 150610 131069 113208 144203 119670 100276 128183 TRUE FALSE 119018.0992 132115.5186 122698.7323 138304.6812 125922.5725 117516.2098 125268.9729 135311.2799 108997.8252 124000.3992 0.959820291 1.065444301 0.98950272 1.115356742 1.015501348 0.947708318 1.0102304 1.091216486 0.87901189 1 16.91998524 -6.525523392 24.9936536 0.991619877 1.03601108 0.105632295 0.063304786 202.0644892 1909613.649 0.02013708 0.020242752 2.98E-07 6.525523392 0.044391203 DNQESSDAELS(ph)SSEYIK ddPTM_A459_MK2206_30min_R1 1 DNQESSDAELSSSEYIK 17 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 DNQESSDAELS(0.751)S(0.227)S(0.021)EYIK 197.41 7.92E-08 15420000 1908.5 1692.4 1954 1342.5 1701.2 1441.7 1630.2 1463.9 1647.7 1395 TRUE FALSE 1746.172053 1582.224452 1821.367924 1445.899583 1633.437602 1523.327808 1521.452332 1451.101277 1818.984311 1567.823132 1.113755766 1.009185552 1.161717727 0.922233863 1.041850684 0.971619679 0.97042345 0.925551644 1.160197394 1 10.6145471 -5.762363925 24.99999674 0.995211489 1.086316257 0.263932998 0.07290763 33.4689562 905054.8669 0.019260099 0.03053958 1.73E-06 5.762363925 0.091104769 DNQHQDEAEGDPGNRHEPR ddPTM_A459_MK2206_30min_R2 1 DNQHQDEAEGDPGNRHEPR 19 1 F8W785;O00461 F8W785 GOLIM4 Golgi integral membrane protein 4 0 56.746 0.02187 1776000 4554.3 5685.9 4796.3 4079.5 5170.3 5733.6 6104.9 5184 6686.3 4254.1 FALSE TRUE 4902.98071 5403.546474 4956.206248 3746.1918 4967.288043 5951.796166 5303.319297 5861.566599 7267.862288 4115.289065 1.191406152 1.313041779 1.204339761 0.910310732 1.207032596 1.446264423 1.288686946 1.424338973 1.766063616 1 12.00677806 -6.681503826 5.393321004 1.405233228 1.157472921 0.231228045 0.199870167 0.294498854 14.60551655 0.066734433 0.066113247 2.08E-07 6.681503826 -0.247760307 DNS(ph)PEPNDPEEPQEVSSTPSDKK ddPTM_A459_MK2206_30min_R1 2 DNSPEPNDPEEPQEVSSTPSDKK 23 1 Q9HB58-7;G5E9C0;Q9HB58-2;Q9HB58-5;Q9HB58-3;Q9HB58;Q9HB58-6 Q9HB58-7 SP110 Sp110 nuclear body protein 1 DNS(1)PEPNDPEEPQEVSSTPSDKK;DNS(1)PEPNDPEEPQEVSSTPSDKK 118.9 5.48E-06 26325000 4241 5329.2 4192.1 4816.1 3532.9 2711.3 3574 3873.3 5727.5 4412.1 TRUE FALSE 3880.28068 4982.268111 3907.551932 5187.036856 3392.177112 2864.811463 3335.584981 3839.436146 6322.894121 4958.704258 0.782519077 1.004752018 0.78801875 1.046046827 0.684085385 0.577733882 0.6726727 0.77428214 1.275110148 1 12.27574747 -8.248656023 24.56470468 1.137555067 0.792121381 0.465997238 0.148277369 494.8784516 950972.2435 0.108520508 0.040400401 5.64E-09 8.248656023 -0.345433686 DNS(ph)PEPNDPEEPQEVSSTPSDKK ddPTM_A459_MK2206_30min_R2 1 DNSPEPNDPEEPQEVSSTPSDKK 23 1 Q9HB58-7;G5E9C0;Q9HB58-2;Q9HB58-5;Q9HB58-3;Q9HB58;Q9HB58-6 Q9HB58-7 SP110 Sp110 nuclear body protein 1 DNS(1)PEPNDPEEPQEVSSTPSDKK 126.04 5.04E-06 7840400 69563 64545 61418 55412 56874 37063 70744 46652 39796 69950 TRUE FALSE 74888.79676 61339.78916 63465.64547 50884.66235 54640.84099 38473.45844 61455.22782 52749.57658 43257.38415 67667.53723 1.106716748 0.906487685 0.937903876 0.751980409 0.807489724 0.568565963 0.908193653 0.779540364 0.639263462 1 16.04617626 -4.846419379 0.947363896 0.766930468 1.238529293 0.398148262 0.120640255 1.828413609 1.390475082 0.039965117 0.870985605 1.42E-05 4.846419379 0.471598826 DNS(ph)PSLK ddPTM_A459_MK2206_30min_R1 1 DNSPSLK 7 0 A0A087WU05;A0A087WY48;Q8IY22-3;Q8IY22-2;Q8IY22 A0A087WU05 CMIP C-Maf-inducing protein 1 DNS(0.5)PS(0.5)LK 96.342 0.023207 20686000 12316 14115 11454 9899 7219 6454 11859 10958 2729.1 12435 TRUE FALSE 11268.45953 13196.11093 10676.53439 10661.4227 6931.451944 6819.419903 11067.90775 10862.19536 3012.799711 13975.54168 0.806298588 0.944228942 0.763944228 0.762862932 0.495970182 0.487953888 0.791948391 0.777228934 0.215576597 1 13.77061658 -5.849107195 2.301631675 0.619963949 0.862776377 0.176182353 0.203857053 0.479018764 5.169543981 0.06035896 0.104948111 1.42E-06 5.849107195 0.242812427 DNSPS(ph)LK ddPTM_A459_MK2206_30min_R2 1 DNSPSLK 7 0 A0A087WU05;A0A087WY48;Q8IY22-3;Q8IY22-2;Q8IY22 A0A087WU05 CMIP C-Maf-inducing protein 1 DNS(0.067)PS(0.933)LK 83.783 0.038651 44023000 124630 107270 125640 107030 103270 65615 133160 99700 93962 156120 TRUE FALSE 134171.7686 101943.1278 129828.7749 98285.30663 99215.10091 68112.0248 115675.932 112731.1323 102134.6449 151025.8172 0.888402865 0.675004643 0.859646233 0.650784803 0.656941328 0.450995903 0.76593482 0.746436168 0.676272751 1 17.20443567 -10.31786885 6.501900283 1.000000004 0.703441248 0.362904064 0.116006539 7.45E-09 1.31E-09 0.114681864 0.027814437 4.81E-11 10.31786885 -0.296558756 DNSTMGYMAAK ddPTM_A459_MK2206_30min_R1 1 DNSTMGYMAAK 11 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 133.07 0.026191 7660600 2031.4 1783.9 2048.8 2157.6 1680.3 1747.6 2116.5 1963.4 1643.3 1532.7 FALSE TRUE 1858.618763 1667.767786 1909.733164 2323.778726 1613.370093 1846.547602 1975.312147 1946.234201 1814.126916 1722.582447 1.07897231 0.968178788 1.108645434 1.34900871 0.936599636 1.071964715 1.14671559 1.129835152 1.053143737 1 10.75035732 -8.535786082 5.236679029 1.000044081 1.098170881 0.080979402 0.105098495 0.423337386 53.2472174 0.103238536 0.026825613 2.91E-09 8.535786082 0.0981268 DNT(ph)LEPPVEHS(ph)S(ph)DS(ph)PSRS(ph)PK ddPTM_A459_MK2206_30min_R1 1 DNTLEPPVEHSSDSPSRSPK 20 1 E2QRH6 E2QRH6 MLIP 5 DNT(0.999)LEPPVEHS(0.893)S(0.893)DS(0.893)PS(0.615)RS(0.706)PK 43.794 0.040364 80215000 631.39 751.16 980.15 663.54 515.75 470.84 733.15 834.14 875.73 1263.7 TRUE FALSE 577.6869649 702.2593475 913.6201489 714.6459658 495.2065854 497.4985539 684.2429012 826.8472019 966.7652673 1420.256696 0.406748278 0.494459452 0.643278184 0.503180846 0.348674001 0.350287772 0.481774107 0.58218152 0.68069756 1 10.47193599 -8.578759138 1.273109537 0.996680902 0.463235383 0.801267244 0.082222261 0.253429183 0.890953776 0.088781185 0.027168448 2.64E-09 8.578759138 -0.533445519 down DNTFFRES(ph)PVGR ddPTM_A459_MK2206_30min_R1 1 DNTFFRESPVGR 12 1 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8VWU8;F8VPY7 F8WF16 PPHLN1 Periphilin-1 1 DNTFFRES(1)PVGR 67.846 0.03908 215670000 4210.8 4324.4 4730.3 4055 5074.7 3899.3 4431.6 3994.1 3885.5 3441.4 TRUE FALSE 3852.649348 4042.880774 4409.220415 4367.316803 4872.563953 4120.074996 4135.97605 3959.180005 4289.411629 3867.746613 0.996096625 1.045280671 1.139997227 1.129163112 1.259793994 1.065239119 1.069350313 1.023639964 1.109020848 1 11.91727757 -9.832318201 8.614766924 0.999999999 1.095447354 0.135389972 0.070322585 0 0 0.07315489 0.017742667 1.47E-10 9.832318201 0.095447354 DNTFFRES(ph)PVGR ddPTM_A459_MK2206_30min_R2 4 DNTFFRESPVGR 12 1 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8VWU8;F8VPY7 F8WF16 PPHLN1 Periphilin-1 1 DNT(0.002)FFRES(0.998)PVGR;DNTFFRES(1)PVGR;DNT(0.001)FFRES(0.999)PVGR;DNTFFRES(1)PVGR 77.24 0.025423 466746500 133200.2 151325 155810.5 175975 182771 173113 170749 126117.1 149614.4 149444.3 TRUE FALSE 143398.1097 143810.4205 161005.1443 161597.2796 175594.4922 179700.9365 148329.4512 142601.038 162627.5901 144567.9447 0.991908061 0.994760082 1.113698784 1.11779468 1.214615678 1.243020622 1.026018952 0.986394586 1.124921506 1 17.14138817 -5.259567795 22.30114486 1.109544257 0.993334005 0.231166369 0.079576418 53.24030302 634322.6197 0.022426362 0.053295187 5.50E-06 5.259567795 -0.116210252 DNTINLIHTFR ddPTM_A459_MK2206_30min_R2 1 DNTINLIHTFR 11 0 H7C3F9;O15144 H7C3F9 ARPC2 Actin-related protein 2/3 complex subunit 2 0 89.663 0.040632 2272400 13254 17347 17284 19556 18049 16487 20975 16753 12376 17562 FALSE TRUE 14268.73643 16485.5732 17860.23993 17958.21224 17340.30557 17114.42434 18220.9573 18942.67462 13452.44211 16988.95338 0.839883194 0.970370148 1.051285476 1.0570523 1.020681215 1.007385444 1.072517941 1.114999506 0.791834659 1 14.05230936 -4.813646176 2.948095912 1.021908255 0.816231632 0.287346908 0.081913123 0.429357885 5.613140849 0.020174549 0.204930759 1.54E-05 4.813646176 -0.205676623 DNTRPGANS(ph)PEMWSEAIK ddPTM_A459_MK2206_30min_R1 1 DNTRPGANSPEMWSEAIK 18 1 F1T0B3;A0A087X2G1;Q92499-3;Q92499-2;Q92499 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 1 DNT(0.001)RPGANS(0.997)PEMWS(0.002)EAIK 103.51 0.0011222 37063000 2962.8 3548.2 3286.2 2923.6 3049.8 3090.2 3827.2 3403.4 2904.1 3027.3 TRUE FALSE 2710.798302 3317.211535 3063.1419 3148.776179 2928.320008 3265.164454 3571.894471 3373.644433 3205.991587 3402.344779 0.796744151 0.974978067 0.900303202 0.925472397 0.860677033 0.959680651 1.04983319 0.991564539 0.942288861 1 11.73231363 -6.961476035 6.320571697 0.996635106 0.899195106 0.50033852 0.049247549 0.161760593 17.5103998 0.017092195 0.014899961 1.09E-07 6.961476035 -0.097440001 DNTRPGANS(ph)PEMWSEAIK ddPTM_A459_MK2206_30min_R2 3 DNTRPGANSPEMWSEAIK 18 1 F1T0B3;A0A087X2G1;Q92499-3;Q92499-2;Q92499 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 1 DNTRPGANS(1)PEMWSEAIK;DNT(0.004)RPGANS(0.995)PEMWS(0.001)EAIK;DNTRPGANS(0.998)PEMWS(0.001)EAIK 89.622 0.0033298 16722500 59036.5 83557 78204 82923 71877 67187 78373.7 70115.4 73412 84928 TRUE FALSE 63556.37983 79407.68088 80811.28233 76147.92564 69054.74783 69743.84837 68083.13905 79279.72352 79797.24306 82156.80632 0.773598472 0.966538068 0.983622489 0.926860829 0.840523761 0.848911387 0.828697488 0.964980591 0.971279759 1 16.32609248 -7.903077855 7.495040811 0.979826143 0.887540041 0.345590109 0.061369282 0.301280387 20.003101 0.036386548 0.017364023 1.25E-08 7.903077855 -0.092286103 DNYVPEVSALDQEIIEVDPDTK ddPTM_A459_MK2206_30min_R1 1 DNYVPEVSALDQEIIEVDPDTK 22 0 H3BNC9;P08708;H0YN88;A0A075B716 H3BNC9 RPS17 40S ribosomal protein S17 0 120.33 4.61E-05 2101300 1274.4 1583.1 1408.6 1445.1 1346.9 1374.2 1401.7 1252.6 923.99 1708.2 FALSE TRUE 1166.005588 1480.039902 1312.988157 1556.401852 1293.250121 1452.006016 1308.195151 1241.64865 1020.042067 1919.824712 0.607350025 0.770924498 0.683910436 0.810699978 0.673629271 0.756322183 0.681413851 0.646751051 0.531320417 1 10.90675888 -7.317098004 24.3106505 0.685433877 0.720348885 0 0.123494876 1300.532206 568041.6969 0.048478819 0.032684446 4.82E-08 7.317098004 0.034915008 DPAQPMS(ph)PGEATQSGAR ddPTM_A459_MK2206_30min_R1 8 DPAQPMSPGEATQSGAR 17 0 Q9BQG0;Q9BQG0-2 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 DPAQPMS(0.995)PGEAT(0.005)QSGAR;DPAQPMS(1)PGEATQSGAR;DPAQPMS(0.988)PGEAT(0.012)QSGAR;DPAQPMS(0.972)PGEAT(0.014)QS(0.014)GAR;DPAQPMS(0.998)PGEAT(0.002)QSGAR;DPAQPMS(0.992)PGEAT(0.008)QSGAR;DPAQPMS(1)PGEATQSGAR;DPAQPMS(0.998)PGEAT(0.001)QS(0.001)GAR 254.8 4.06E-31 185235100 14958.86 14585.5 14223.67 10630.2 12027.05 14129.5 16808.7 12514.91 15627.95 17770.4 TRUE FALSE 13686.5304 13635.9813 13258.20691 11448.93985 11547.98713 14929.50008 15687.42229 12405.49346 17252.53133 19971.93131 0.685288277 0.68275727 0.663842004 0.573251513 0.578210838 0.747524105 0.785473475 0.621146411 0.863838908 1 14.28568623 -8.678421742 0.682191302 1.006358208 0.648557542 0.711516193 0.068212737 0.543459326 0.547829863 0.073105063 0.028160466 2.10E-09 8.678421742 -0.357800665 DPAQPMS(ph)PGEATQSGAR ddPTM_A459_MK2206_30min_R2 12 DPAQPMSPGEATQSGAR 17 0 Q9BQG0;Q9BQG0-2 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 DPAQPMS(0.964)PGEAT(0.036)QSGAR;DPAQPMS(0.988)PGEAT(0.012)QSGAR;DPAQPMS(0.945)PGEAT(0.055)QSGAR;DPAQPMS(1)PGEATQSGAR;DPAQPMS(0.973)PGEAT(0.027)QSGAR;DPAQPMS(0.916)PGEAT(0.084)QSGAR;DPAQPMS(1)PGEATQSGAR;DPAQPMS(0.966)PGEAT(0.031)QS(0.003)GAR;DPAQPMS(0.979)PGEAT(0.02)QS(0.002)GAR;DPAQPMS(1)PGEATQSGAR;DPAQPMS(1)PGEATQSGAR;DPAQPMS(0.999)PGEAT(0.001)QSGAR 229.62 2.37E-16 482825800 281851 250330 239625.4 255496 246685.9 243477 303222 214963.4 209717.8 283130 TRUE FALSE 303429.7293 237898.9762 247614.3912 234621.1595 236999.7721 252742.6878 263408.5872 243059.8545 227958.6752 273891.4913 1.107846497 0.868588415 0.904060181 0.856620841 0.865305348 0.922784007 0.961726069 0.887431199 0.832295571 1 18.06324492 -4.756778918 24.96089171 0.896698823 1.107846822 0.625538826 0.048218223 89.41343995 478829.0179 0.011775435 0.092494786 1.75E-05 4.756778918 0.211147999 DPAQPMS(ph)PGEATQSGARPADR ddPTM_A459_MK2206_30min_R1 1 DPAQPMSPGEATQSGARPADR 21 1 Q9BQG0;Q9BQG0-2 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 DPAQPMS(0.988)PGEAT(0.007)QS(0.004)GARPADR 61.815 0.031031 28491000 2214.6 1878.9 2080.4 2107.8 1955.6 1692.2 2160.4 1630.3 1539.5 1581.4 TRUE FALSE 2026.236641 1756.583268 1939.188244 2270.143121 1877.704311 1788.010902 2016.283658 1616.046459 1699.536534 1777.315771 1.140054386 0.988334936 1.091076935 1.277287446 1.056483233 1.006017575 1.134454378 0.909262431 0.956237806 1 10.79548431 -7.760962476 24.99996019 0.949562572 1.096166421 0.412414982 0.078590501 12.98164291 680649.1696 0.041322974 0.021982691 1.73E-08 7.760962476 0.146603849 DPAQPMS(ph)PGEATQSGARPADR ddPTM_A459_MK2206_30min_R2 4 DPAQPMSPGEATQSGARPADR 21 1 Q9BQG0;Q9BQG0-2 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 DPAQPMS(0.893)PGEAT(0.036)QS(0.071)GARPADR;DPAQPMS(0.984)PGEAT(0.014)QS(0.003)GARPADR;DPAQPMS(0.861)PGEAT(0.122)QS(0.017)GARPADR;DPAQPMS(0.79)PGEAT(0.114)QS(0.097)GARPADR 99.161 0.0032923 103290900 59963.1 78239.7 72086.6 77742.1 86395.9 87909 81204.7 53228.7 74353.8 67305.6 TRUE FALSE 64553.92104 74354.43027 74489.93127 71390.32175 83003.56286 91254.4386 70542.42535 60185.87385 80820.95912 65109.42378 0.991468167 1.141991834 1.144072961 1.096466803 1.274831784 1.401555002 1.083444166 0.924380379 1.241309697 1 15.99057875 -7.504374125 24.95884056 1.050489452 1.178896757 0.163756236 0.125755364 1321.012468 1781775.121 0.055380163 0.036569302 3.13E-08 7.504374125 0.128407304 DPAQPMSPGEAT(ph)QSGARPADR ddPTM_A459_MK2206_30min_R1 3 DPAQPMSPGEATQSGARPADR 21 1 Q9BQG0;Q9BQG0-2 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 DPAQPMS(0.347)PGEAT(0.576)QS(0.077)GARPADR;DPAQPMS(0.002)PGEAT(0.841)QS(0.157)GARPADR;DPAQPMS(0.167)PGEAT(0.417)QS(0.417)GARPADR 102.84 0.00027972 261845000 6895.6 7090.5 7925 6543.2 7964.5 6825.7 7527.5 7197 5922.3 5019.6 TRUE FALSE 6309.09301 6628.907161 7387.07308 7047.158398 7647.2571 7212.165235 7025.35421 7134.077388 6537.944278 5641.465944 1.118342834 1.175032736 1.309424386 1.249171486 1.355544317 1.278420415 1.2453065 1.26457865 1.158908756 1 12.46185438 -8.605775796 2.491044992 1.00022596 1.25345735 0.599984306 0.0624653 0.273921072 3.903133977 0.064274158 0.017407243 2.48E-09 8.605775796 0.25323139 DPAQPMSPGEAT(ph)QSGARPADR ddPTM_A459_MK2206_30min_R2 2 DPAQPMSPGEATQSGARPADR 21 1 Q9BQG0;Q9BQG0-2 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 DPAQPMS(0.027)PGEAT(0.676)QS(0.298)GARPADR;DPAQPMS(0.003)PGEAT(0.945)QS(0.052)GARPADR 90.229 0.00155 190384500 35118.8 43848 34268 51380 60296 61754 57586 45253 60902 50644 TRUE FALSE 37807.52233 41670.57208 35410.47802 47182.08964 57928.47608 64104.09174 50024.88903 51167.72248 66199.14587 48991.49043 0.771716108 0.850567552 0.72278834 0.963067039 1.182419142 1.308474006 1.021093431 1.044420613 1.351237639 1 15.58024356 -6.027340438 3.433140652 1.153363595 0.790231123 0.684185653 0.112705715 0.13883791 3.401409093 0.033963429 0.048467217 9.39E-07 6.027340438 -0.363132472 DPAQPMSPGEATQS(ph)GARPADR ddPTM_A459_MK2206_30min_R2 1 DPAQPMSPGEATQSGARPADR 21 1 Q9BQG0;Q9BQG0-2 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 DPAQPMS(0.001)PGEAT(0.095)QS(0.905)GARPADR 143.72 3.85E-05 39730000 33985 50217 41968 46173 51208 58103 50435 31081 46038 42655 TRUE FALSE 36586.91773 47723.2968 43367.19217 42400.5182 49197.31662 60314.15038 43812.82392 35143.39342 50042.30202 41263.17084 0.886672473 1.156559126 1.050990297 1.027563256 1.192281534 1.461694512 1.061790042 0.851689114 1.21275949 1 15.33256707 -4.754940853 24.3348022 1.11537472 0.886671925 0.163835592 0.153166894 314.3758538 1177075.554 0.040168627 0.367607244 1.76E-05 4.754940853 -0.228702795 DPDANWDS(ph)PSR ddPTM_A459_MK2206_30min_R2 1 DPDANWDSPSR 11 0 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 DPDANWDS(0.943)PS(0.057)R 111.31 0.0083187 6020000 27154 17098 21267 26741 20355 23534 25911 18337 17900 21082 TRUE FALSE 29232.93112 16248.93818 21976.03117 24556.17476 19555.76042 24429.60286 22508.85458 20733.70886 19456.90964 20394.09607 1.433401658 0.796747163 1.077568287 1.204082529 0.958893219 1.197876228 1.103694643 1.016652505 0.95404619 1 14.31586394 -7.88874722 3.851480279 0.979028798 1.098083858 0.109387609 0.156669985 0.558885473 15.28803269 0.090819829 0.040100378 1.29E-08 7.88874722 0.119055059 DPEDRIPS(ph)PLGYAAIPIK ddPTM_A459_MK2206_30min_R1 1 DPEDRIPSPLGYAAIPIK 18 1 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A 1 DPEDRIPS(0.999)PLGY(0.001)AAIPIK 57.484 0.033026 10769000 2663 2828.8 2534 2265.7 2456.9 2467.9 2587.2 2242.2 2033.5 2251.1 TRUE FALSE 2436.497866 2644.644606 2361.99914 2440.204607 2359.03647 2607.630365 2414.612609 2222.596682 2244.889602 2529.983263 0.963049006 1.045320989 0.933602674 0.96451413 0.932431651 1.030690757 0.954398649 0.878502524 0.887314013 1 11.30491213 -7.546273917 10.67986515 0.912960329 0.977906111 0.224340488 0.046024833 0.584523528 258.8113913 0.021004146 0.012190776 2.84E-08 7.546273917 0.064945782 DPEDRIPS(ph)PLGYAAIPIK ddPTM_A459_MK2206_30min_R2 1 DPEDRIPSPLGYAAIPIK 18 1 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A 1 DPEDRIPS(0.987)PLGY(0.013)AAIPIK 103.31 0.0011484 1639700 14646 16337 14675 16210 14863 16319 17880 14802 13326 15702 TRUE FALSE 15767.30902 15525.72834 15164.25718 14885.59115 14279.40394 16940.03098 15532.33452 16736.67222 14485.07139 15189.64503 1.038030118 1.022125817 0.998328608 0.979982819 0.940074894 1.115235475 1.022560731 1.101847488 0.953614872 1 13.89080053 -6.750216342 24.9981231 1.044011506 0.99644802 0.152396617 0.04982726 382.8603211 852779.6358 0.016097358 0.015959365 1.78E-07 6.750216342 -0.047563486 DPHLACVAYER ddPTM_A459_MK2206_30min_R1 1 DPHLACVAYER 11 0 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 87.667 0.044583 6796600 1037.8 1062.7 1289.5 878.37 1105.3 1145.4 1457.5 1148.6 974.26 1096.7 FALSE TRUE 949.5296603 993.5180368 1201.972333 946.0222096 1061.27356 1210.251558 1360.272834 1138.557911 1075.537813 1232.567476 0.770367285 0.806055698 0.975177714 0.767521639 0.861026744 0.98189477 1.103609223 0.923728667 0.872599541 1 10.26745091 -6.715152373 4.920451209 0.97993387 0.836308542 0.453375808 0.077346604 0.198797079 10.55678384 0.027484904 0.02678654 1.93E-07 6.715152373 -0.143625328 DPHLACVAYER ddPTM_A459_MK2206_30min_R2 2 DPHLACVAYER 11 0 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 ; 99.752 0.023808 8498000 19182.2 22559 19533.4 19337.2 23798 26871 19035 17392.1 18827.8 18636 FALSE TRUE 20650.80398 21438.75286 20184.63381 17757.2889 22863.57094 27893.59473 16535.68163 19665.30719 20465.40801 18027.90885 1.145490814 1.189197984 1.119632564 0.984988833 1.268232003 1.547245162 0.917226827 1.09082575 1.135206983 1 14.13794444 DPHLLDPTVEY(ph)VK ddPTM_A459_MK2206_30min_R1 2 DPHLLDPTVEYVK 13 0 O75815 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 DPHLLDPT(0.009)VEY(0.991)VK;DPHLLDPT(0.023)VEY(0.977)VK 166.7 0.0021226 14764600 7084.1 8836.4 8712.9 5939.2 5096.2 5161.1 7138.8 6572.7 10141.2 11105.9 TRUE FALSE 6481.560095 8261.148754 8121.492624 6396.638213 4893.207563 5453.317022 6662.583677 6515.235577 11195.41403 12481.78274 0.519281599 0.661856477 0.650667681 0.512477933 0.392027939 0.436902095 0.533784622 0.521979569 0.896940306 1 13.60753638 -8.334935325 3.560399081 0.99272047 0.527681215 0.823052971 0.078412948 0.105131181 2.438334018 0.085482493 0.023174646 4.62E-09 8.334935325 -0.465039255 DPHLLDPTVEY(ph)VK ddPTM_A459_MK2206_30min_R2 2 DPHLLDPTVEYVK 13 0 O75815 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 DPHLLDPTVEY(1)VK;DPHLLDPTVEY(1)VK 162.93 3.22E-06 2795800 46564 36530 39351 38087 38225 24840 47837 33975 27694 48510 TRUE FALSE 50128.97564 34715.97332 40662.9427 34975.17027 36724.09443 25785.30361 41555.94444 38415.64915 30102.77406 46927.12267 1.068230328 0.739784827 0.866512592 0.74530822 0.782577161 0.549475487 0.885542136 0.81862358 0.64147922 1 15.51813438 -4.757508221 24.96241581 0.772998392 1.068230762 0.338016575 0.120101551 124.19084 788485.9048 0.028363204 0.208787623 1.75E-05 4.757508221 0.295232371 DPLAS(ph)GPPDS(ph)MAASPS(ph)PKK ddPTM_A459_MK2206_30min_R1 1 DPLASGPPDSMAASPSPKK 19 1 O43497-5;O43497-6;O43497-20;O43497-4;O43497-33;O43497-12;O43497-7;O43497-16;O43497-10;O43497-8;O43497-21;O43497-25;O43497-11;O43497-17;O43497-13;O43497-19;O43497-9;O43497-15;O43497-34;O43497-2;O43497-24;O43497-35;O43497-36;O43497-3;O43497-26;O43497-23;O43497-22;O43497-18;O43497 O43497-5 CACNA1G Voltage-dependent T-type calcium channel subunit alpha-1G 3 DPLAS(1)GPPDS(1)MAAS(0.001)PS(0.999)PKK 56.131 0.031097 9013900 1263.1 865.1 1044.7 791.26 1244.4 1227.5 1342.9 974.34 994.33 667 TRUE FALSE 1155.666712 808.7818328 973.7886747 852.2029823 1194.832913 1296.999989 1253.317591 965.8214481 1097.694162 749.6329956 1.541643336 1.078903727 1.299020561 1.136826937 1.593890504 1.730179964 1.671908252 1.288392392 1.464308759 1 9.550040645 -6.264235993 24.89522723 1.496826012 1.253364855 0.135725489 0.226952448 378.5467746 3369784.018 0.0682734 0.080885259 5.44E-07 6.264235993 -0.243461157 DPLEEMVPLSHLEEEQPPAPES(ph)PESR ddPTM_A459_MK2206_30min_R1 1 DPLEEMVPLSHLEEEQPPAPESPESR 26 0 O60307 O60307 MAST3 Microtubule-associated serine/threonine-protein kinase 3 1 DPLEEMVPLSHLEEEQPPAPES(0.582)PES(0.418)R 76.028 0.0025557 0 82.16 215.41 183.14 183.22 265.2 229.09 136.96 227.47 307.51 137.17 TRUE FALSE 75.17186056 201.3867698 170.7089671 197.3316361 254.6365224 242.0608778 127.8236483 225.4812538 339.4767649 154.1636552 0.487610783 1.306318079 1.107323038 1.280013995 1.651728627 1.570155284 0.829142564 1.462609676 2.202054463 1 7.268318873 -4.620171124 1.310143166 1.418690005 1.92E-46 0.34053664 0.367235581 2.431478126 2.82672305 0.109147987 5.109418845 2.40E-05 4.620171124 -1.418690005 DPLPDAGAS(ph)PAPSR ddPTM_A459_MK2206_30min_R2 1 DPLPDAGASPAPSR 14 0 O15297-2;O15297 O15297-2 PPM1D Protein phosphatase 1D 1 DPLPDAGAS(0.988)PAPS(0.012)R 77.068 0.040925 3438000 15272 12211 9740.7 13116 13337 11923 12322 12496 9039.7 11093 TRUE FALSE 16441.23606 11604.6195 10065.45008 12044.38084 12813.32237 12376.73812 10704.1066 14129.27011 9825.956766 10731.03632 1.532120065 1.081407159 0.937975586 1.122387483 1.194043333 1.153359075 0.997490483 1.316673403 0.915657768 1 13.38950179 -4.760765981 24.97205343 1.08996598 1.53212058 0.571178488 0.117261024 11.72911322 434635.9826 0.027995889 0.162429861 1.73E-05 4.760765981 0.4421546 DPQT(ph)PVLQTK ddPTM_A459_MK2206_30min_R1 1 DPQTPVLQTK 10 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 DPQT(0.994)PVLQT(0.006)K 100.02 0.041791 8600600 2766.5 2952.6 2491.2 2134 2116.9 2125.3 2630.3 2066.1 2617.7 2631.7 TRUE FALSE 2531.194648 2760.385203 2322.104285 2298.36105 2032.57939 2245.632649 2454.837486 2048.036306 2889.819283 2957.734864 0.855788218 0.933276757 0.785095484 0.777067978 0.687208111 0.759240687 0.829972124 0.692434041 0.977037975 1 11.53027702 -8.348391968 7.129714961 0.994411385 0.791248524 0.568488773 0.069204915 0.226006023 15.78368673 0.071776425 0.018606845 4.48E-09 8.348391968 -0.203162862 DPS(ph)ASPGDAGEQAIR ddPTM_A459_MK2206_30min_R1 2 DPSASPGDAGEQAIR 15 0 P18206;P18206-2 P18206 VCL Vinculin 1 DPS(0.647)AS(0.353)PGDAGEQAIR;DPS(0.5)AS(0.5)PGDAGEQAIR 165.89 8.33E-05 53315000 1678.24 1677.41 1910.87 967.36 1620.81 1406.2 1860.11 1529.26 1784.93 2070.8 TRUE FALSE 1535.496875 1568.210304 1781.165468 1041.866235 1556.249706 1485.817829 1736.025456 1515.889841 1970.479861 2327.346338 0.659762946 0.673819052 0.76532033 0.447662738 0.668679895 0.638417155 0.745924845 0.651338315 0.846663786 1 11.1844702 -8.531375374 1.215688529 1.002923178 0.647525127 0.653386538 0.08116351 0.31363499 1.015883914 0.076948652 0.023960383 2.94E-09 8.531375374 -0.355398051 DPS(ph)ASPGDAGEQAIR ddPTM_A459_MK2206_30min_R2 2 DPSASPGDAGEQAIR 15 0 P18206;P18206-2 P18206 VCL Vinculin 1 DPS(0.756)AS(0.244)PGDAGEQAIR;DPS(0.897)AS(0.103)PGDAGEQAIR 180.56 2.02E-05 204265000 36654.1 27737.6 28695.3 34716 31661 30895 38190 23144.5 28563.9 31574.1 TRUE FALSE 39460.36608 26360.19112 29651.98698 31879.59175 30417.83006 32070.73087 33175.60713 26169.56562 31048.33639 30543.8397 1.291925523 0.863028073 0.970800897 1.04373229 0.995874466 1.049990151 1.086163608 0.856787027 1.016517134 1 14.89859382 -4.746026013 24.98586968 0.989125925 1.291926352 0.622309531 0.071250811 590.1811706 956661.5925 0.017953994 0.428387148 1.79E-05 4.746026013 0.302800426 DPS(ph)PEADAPVLGSPEK ddPTM_A459_MK2206_30min_R2 1 DPSPEADAPVLGSPEK 16 0 O15234 O15234 CASC3 Protein CASC3 1 DPS(1)PEADAPVLGSPEK 191.15 1.05E-06 5596200 21240 10171 18118 14562 9459 9494.1 13514 13706 9940.9 15900 TRUE FALSE 22866.15073 9665.92293 18722.04508 13372.23802 9087.592132 9855.404628 11739.59557 15497.42126 10805.54151 15381.1843 1.486631347 0.628425142 1.217204391 0.869389363 0.590825255 0.6407442 0.763243931 1.007557088 0.702516874 1 13.90887897 -5.963883463 8.387883984 0.772111014 1.0603609 0.269948828 0.235650005 0.361703772 74.56344129 0.063943518 0.094646392 1.09E-06 5.963883463 0.288249886 DPS(ph)PESNK ddPTM_A459_MK2206_30min_R2 1 DPSPESNK 8 0 Q8NDX5-2;Q8NDX5;Q8NDX5-7;E7EX82;Q8NDX5-3 Q8NDX5-2 PHC3 Polyhomeotic-like protein 3 1 DPS(0.959)PES(0.041)NK 82.494 0.04118 14396000 119850 47870 59005 87533 97458 50367 95708 341530 130580 141200 TRUE FALSE 129025.8081 45492.84541 60972.19725 80381.2739 93631.30923 52283.75148 83141.42463 386169.1436 141937.6124 136592.6556 0.944602824 0.333054843 0.446379763 0.588474348 0.685478358 0.382771323 0.608681516 2.827158913 1.039130631 1 17.05952039 -7.573625182 24.96387619 1.703475511 0.549463063 0.483766596 0.496013971 74.82626537 36808.66819 0.213749209 0.123408176 2.67E-08 7.573625182 -1.154012448 DPSASNGGGS(ph)PAR ddPTM_A459_MK2206_30min_R1 4 DPSASNGGGSPAR 13 0 O60504-2;O60504;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 DPSASNGGGS(1)PAR;DPSASNGGGS(1)PAR;DPSAS(0.001)NGGGS(0.999)PAR;DPSASNGGGS(1)PAR 163.9 0.00036288 29244700 4315.19 4515.13 4112.07 3227.95 3810.52 4145.8 5050.68 4362.99 1928.42 4110.66 TRUE FALSE 3948.160431 4221.194216 3832.954145 3476.567268 3658.738919 4380.531613 4713.758353 4324.844838 2128.88616 4619.919595 0.854595053 0.913694304 0.829658194 0.752516834 0.791948614 0.948183518 1.020311773 0.936129894 0.46080589 1 12.17365203 -11.98599797 2.464657337 3.152643801 0.844587513 0.100124284 0.146159551 26075994.47 6501836.7 305292368.6 0.037493384 1.03E-12 11.98599797 -2.308056288 DPSASNGGGS(ph)PAR ddPTM_A459_MK2206_30min_R2 1 DPSASNGGGSPAR 13 0 O60504-2;O60504;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 DPSASNGGGS(1)PAR 158.65 0.00036454 7288200 13186 14136 14003 16293 14474 16487 15065 9639.4 13719 15511 TRUE FALSE 14195.5303 13434.0268 14469.85303 14961.80978 13905.67803 17114.42434 13086.9474 10899.30268 14912.25382 15004.87734 0.946061069 0.895310671 0.964343307 0.997129763 0.926743866 1.140590753 0.872179566 0.72638399 0.993827106 1 13.8731439 -8.483746984 24.99534961 1.000002051 0.935085579 0.062514083 0.098093568 1482.418234 946893.307 0.099329961 0.025646886 3.28E-09 8.483746984 -0.064916472 DPSASNGGGS(ph)PARR ddPTM_A459_MK2206_30min_R1 2 DPSASNGGGSPARR 14 1 O60504-2;O60504;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 DPSASNGGGS(1)PARR;DPSAS(0.001)NGGGS(0.999)PARR 105.14 0.010661 11269800 1079.01 1284.99 1019.14 953.11 1028.99 927.25 1250.46 852.2 527.13 778.12 TRUE FALSE 987.2345334 1201.336917 949.9636163 1026.518697 988.0031494 979.7500937 1167.044095 844.7493052 581.9270499 874.5193801 1.128888114 1.373711029 1.08626937 1.173808975 1.129767015 1.120329767 1.334497693 0.965958359 0.66542499 1 9.772346546 -7.964083347 6.153908476 0.825926828 1.188224179 0.621173677 0.115877761 0.100028265 10.544165 0.062650122 0.028895736 1.09E-08 7.964083347 0.362297351 DPSASNGGGS(ph)PARR ddPTM_A459_MK2206_30min_R2 1 DPSASNGGGSPARR 14 1 O60504-2;O60504;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 DPSASNGGGS(1)PARR 103.66 0.012092 6068800 5078 6994.2 6770.7 8016.9 9013.7 7408.8 7483.4 7393 6445.6 7590.2 TRUE FALSE 5466.775584 6646.878199 6996.431759 7361.893625 8659.776848 7690.747076 6500.820591 8359.290484 7006.226637 7342.532396 0.74453544 0.905256911 0.952863587 1.00263686 1.179399202 1.04742433 0.885364918 1.138475125 0.954197579 1 12.84206201 -4.793507009 1.173834053 1.034700735 0.617455266 0.543072564 0.080468293 1.19339347 1.400316536 0.025137754 0.612368425 1.61E-05 4.793507009 -0.417245469 DPTVHDDVLELEMDELNR ddPTM_A459_MK2206_30min_R1 3 DPTVHDDVLELEMDELNR 18 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 0 ;; 224.67 1.04E-13 5206500 2464.55 2335.56 2594.99 1831.8 2423.74 2602.58 3009.72 1972.76 2848.22 3400.43 FALSE TRUE 2254.927081 2183.514619 2418.849309 1972.885553 2327.197303 2749.93583 2808.94707 1955.512367 3144.302661 3821.70094 0.590032322 0.571346281 0.632924801 0.516232323 0.608942808 0.71955809 0.734999183 0.511686392 0.822749532 1 11.89999917 -10.9674983 0.227234615 1.338085165 0.549381867 0.697650556 0.079463073 12.72651464 0.542007397 2.609627223 0.163854326 1.08E-11 10.9674983 -0.788703298 DPVQEAWAEDVDLR ddPTM_A459_MK2206_30min_R1 2 DPVQEAWAEDVDLR 14 0 P14618;P14618-3;B4DNK4;P14618-2;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 267.23 5.02E-43 24664000 1808.71 2004.26 1483.92 1257 1525.43 1705.55 2331 1407.23 1877.5 2473 FALSE TRUE 1654.869717 1873.78231 1383.195645 1353.814358 1464.668893 1802.116767 2175.503243 1394.926736 2072.672844 2779.37391 0.59541097 0.674174246 0.49766447 0.487093281 0.526977996 0.648389467 0.782731404 0.501885238 0.745733719 1 11.44054422 -9.544208797 0.429751117 1.061137659 0.563230948 0.656354226 0.090722438 2.914401702 0.691857667 0.396556985 0.059393489 2.86E-10 9.544208797 -0.497906711 DPVQEAWAEDVDLR ddPTM_A459_MK2206_30min_R2 3 DPVQEAWAEDVDLR 14 0 P14618;P14618-3;B4DNK4;P14618-2;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;; 211.83 4.54E-05 52447800 24570.9 21302.9 24597.6 23242 18014 21171.8 26405.7 19666.3 19853.7 25200.9 FALSE TRUE 26452.067 20245.02896 25417.67171 21343.05425 17306.67985 21977.50768 22938.59987 22236.75293 21580.53894 24378.5967 1.085052898 0.830442753 1.042622429 0.875483299 0.709912882 0.901508317 0.940931923 0.912142451 0.885224823 1 14.57332746 -4.748772813 24.90111522 0.896169001 1.085053364 0.293445163 0.086067317 770.1980099 1514031.722 0.021833187 0.381704829 1.78E-05 4.748772813 0.188884363 DQAMAS(ph)ALFTADSQAMVK ddPTM_A459_MK2206_30min_R2 1 DQAMASALFTADSQAMVK 18 0 P17029;E9PC66 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 1 DQAMAS(0.989)ALFT(0.008)ADS(0.003)QAMVK 81.428 0.026579 12871000 34607 44583 33758 41331 43869 38529 49541 45363 39979 42506 TRUE FALSE 37256.53853 42369.07305 34883.47487 37954.12509 42146.48264 39995.24809 43036.20719 51292.09985 43456.30115 41119.0327 0.906065539 1.030400529 0.848353489 0.923030592 1.024987211 0.972669965 1.04662499 1.247405313 1.056841523 1 15.32751871 -7.352761069 2.960673435 1.118008041 0.949942595 0.426607085 0.07808495 0.231072773 3.925646411 0.035877334 0.022837046 4.44E-08 7.352761069 -0.168065446 DQDLAS(ph)CDRDR ddPTM_A459_MK2206_30min_R2 1 DQDLASCDRDR 11 1 Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 DQDLAS(1)CDRDR 146.67 0.003228 3749200 36621 28362 29347 25959 27432 25480 37246 25852 21792 33202 TRUE FALSE 39424.73192 26953.58432 30325.41433 23838.06666 26354.88185 26449.65925 32355.55546 29230.94516 23687.42877 32118.62146 1.227472728 0.839188704 0.944169238 0.74218835 0.82054835 0.823499206 1.007376842 0.910093392 0.737498301 1 14.97112235 -4.758826447 24.99941254 0.866298813 1.227473207 0.583189425 0.090781965 50.4720183 482798.0795 0.022417195 0.148959426 1.74E-05 4.758826447 0.361174394 DQDMDEDYNR ddPTM_A459_MK2206_30min_R2 1 DQDMDEDYNR 10 0 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 0 144.55 0.013412 4722600 27940 28197 27998 28410 25301 24787 22207 26895 18220 30492 FALSE TRUE 30079.10788 26796.77798 28931.43935 26088.81212 24307.55561 25730.28665 19291.19422 30410.26884 19804.74267 29497.04854 1.0197328 0.908456246 0.980824889 0.884455002 0.824067384 0.87230038 0.65400422 1.030959718 0.671414384 1 14.84828299 -5.94054959 3.30164206 0.836213516 0.963772362 0.193594435 0.115443091 0.384423113 8.548677291 0.031751931 0.048566436 1.15E-06 5.94054959 0.127558846 DQDMS(ph)SPTTMK ddPTM_A459_MK2206_30min_R1 2 DQDMSSPTTMK 11 0 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 DQDMS(0.959)S(0.02)PT(0.021)TMK;DQDMS(0.719)S(0.151)PT(0.089)T(0.042)MK 234.04 1.16E-07 36050000 14870.9 13425.2 11970.7 11129.7 10980.4 10573.3 12503.5 10644.8 11365.4 10321.6 TRUE FALSE 13606.05186 12551.21704 11158.16224 11986.91142 10543.02742 11171.95111 11669.41433 10551.73364 12546.874 11600.31773 1.172903379 1.081971833 0.961884191 1.033326129 0.90885678 0.963072854 1.00595644 0.909607295 1.081597443 1 13.5018767 -4.969500777 2.192074147 0.978252783 1.189670006 0.591252977 0.050460072 0.276129095 2.065816097 0.012821246 0.098997967 1.07E-05 4.969500777 0.211417223 DQDMS(ph)SPTTMK ddPTM_A459_MK2206_30min_R2 2 DQDMSSPTTMK 11 0 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 DQDMS(0.7)S(0.234)PT(0.06)T(0.006)MK;DQDMS(0.769)S(0.212)PT(0.018)T(0.002)MK 233.52 1.44E-07 57817000 398080 407420 391780 394310 412920 329750 433220 336460 305840 426750 TRUE FALSE 428557.3109 387188.1152 404841.7497 362093.6117 396706.686 342298.8673 376337.6936 380436.4772 332441.4104 412825.1824 1.038108451 0.93789849 0.980661469 0.87711125 0.960955637 0.82916179 0.911615157 0.921543775 0.805283748 1 18.65517145 -3.134400386 0.580764798 0.894218161 1.890314026 0.32451661 0.057509173 24.254812 1.347062767 0.025577164 24.65185997 0.000733837 3.134400386 0.996095865 DQDNMQAELNR ddPTM_A459_MK2206_30min_R1 2 DQDNMQAELNR 11 0 P33176 P33176 KIF5B Kinesin-1 heavy chain 0 ; 224.75 0.00046214 24334000 3976.6 3775 4150.9 3965.6 4386 3819.2 4449.8 3592.9 3425.4 3411.4 FALSE TRUE 3638.369288 3529.246814 3869.148473 4271.031199 4211.296332 4035.439804 4152.961961 3561.487654 3781.482588 3834.029987 0.948967353 0.920505793 1.00915968 1.113979602 1.098399425 1.052532144 1.083184528 0.928914919 0.986294474 1 11.90464591 -5.394951151 4.505408374 1.041034677 0.935845481 0.363940257 0.053254069 0.24871235 7.887694724 0.015702604 0.034252682 4.03E-06 5.394951151 -0.105189197 DQEFTVDTR ddPTM_A459_MK2206_30min_R2 2 DQEFTVDTR 9 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 0 ; 182.39 0.016235 21502900 161860 145670 131395 162240 145267 160319 163135 134315 133361 158467 FALSE TRUE 174252.126 138436.2396 135775.6437 148984.473 139563.0877 166420.0519 141715.1785 151870.4317 144960.4987 153296.2348 1.136701931 0.903063535 0.885707623 0.971873009 0.910414322 1.085610825 0.924453094 0.990699034 0.945623348 1 17.22596274 DQGT(ph)PEVQPTPAK ddPTM_A459_MK2206_30min_R2 2 DQGTPEVQPTPAK 13 0 J3KS37;O94762-4;O94762;J3KSV9 J3KS37 RECQL5 ATP-dependent DNA helicase Q5 1 DQGT(0.983)PEVQPT(0.017)PAK;DQGT(0.987)PEVQPT(0.013)PAK 154.51 0.00089497 15307800 177364 194235 174259 196106 176820 169535 212394 171880 151598 197622 TRUE FALSE 190943.1242 184589.5723 180068.7081 180083.5125 169877.1584 175986.7732 184506.4127 194345.3062 164783.72 191173.6103 0.998794362 0.965559901 0.94191195 0.94198939 0.888601508 0.920559971 0.965124906 1.016590657 0.861958508 1 17.54452386 -10.44629622 14.98871259 0.999999966 0.945400345 0.123721248 0.044208532 0 0 0.042812589 0.010383578 3.58E-11 10.44629622 -0.054599621 DQGTYEDYVEGLR ddPTM_A459_MK2206_30min_R1 2 DQGTYEDYVEGLR 13 0 P60660-2;F8W1R7;G8JLA2;G3V1V0;P60660;J3KND3;B7Z6Z4;G3V1Y7;F8VPF3;F8VZU9;F8W180;H0YI43 P60660-2 MYL6 Myosin light polypeptide 6 0 ; 184.96 0.0017275 19583500 3858.3 3830 3897.3 3460 3404.4 3214.9 3619.1 3157.7 3915.2 4523.7 FALSE TRUE 3530.131324 3580.666304 3632.762134 3726.4898 3268.795539 3396.92486 3377.676442 3130.092562 4322.199051 5084.130108 0.694343231 0.70428298 0.714529734 0.732965074 0.642940969 0.668142787 0.664356806 0.615659414 0.850135413 1 12.31178524 -8.504436402 3.878529629 0.999156983 0.682077846 0.905104553 0.03350341 0.054443534 2.13637804 0.034983334 0.009186245 3.13E-09 8.504436402 -0.317079137 DQGTYEDYVEGLR ddPTM_A459_MK2206_30min_R2 3 DQGTYEDYVEGLR 13 0 P60660-2;F8W1R7;G8JLA2;G3V1V0;P60660;J3KND3;B7Z6Z4;G3V1Y7;F8VPF3;F8VZU9;F8W180;H0YI43 P60660-2 MYL6 Myosin light polypeptide 6 0 ;; 182.37 1.59E-13 30022000 52198 65334 55843 60321 54716 58448 56111 53081 49981 65976 FALSE TRUE 56194.31901 62089.60856 57704.77775 55392.58134 52567.57491 60672.2796 48743.5583 60018.86895 54328.25704 63823.20852 0.880468411 0.972837468 0.904134704 0.86790656 0.823643564 0.950630358 0.763727795 0.940392537 0.851230427 1 15.96179352 -4.418927826 18.12036774 0.891977909 0.000308992 0.000181364 0.068917614 1005.393613 213342.9851 0.01579366 8023.368642 3.81E-05 4.418927826 -0.891668917 DQHHLGS(ph)PSR ddPTM_A459_MK2206_30min_R2 1 DQHHLGSPSR 10 0 Q9H8M2;Q9H8M2-2;Q9H8M2-3;Q9H8M2-1;Q9H8M2-6 Q9H8M2 BRD9 Bromodomain-containing protein 9 1 DQHHLGS(0.947)PS(0.053)R 73.415 0.04319 35426000 12231 18268 13720 21390 22679 25490 26335 18859 15237 18593 TRUE FALSE 13167.41476 17360.83768 14177.41795 19642.36858 21788.50851 26460.03981 22877.18287 21323.93605 16562.28672 17986.31193 0.732079751 0.965224986 0.788233742 1.092073164 1.211393897 1.471120923 1.271921834 1.185564675 0.920827281 1 14.13461177 -5.908017612 3.680901815 1.202863446 0.84218868 0.508167771 0.151527666 0.188938734 4.970413979 0.045987413 0.070936125 1.24E-06 5.908017612 -0.360674766 DQHLCS(ph)HRGGVGR ddPTM_A459_MK2206_30min_R2 1 DQHLCSHRGGVGR 13 1 A8MVI5 A8MVI5 ISY1 1 DQHLCS(1)HRGGVGR 56.205 0.046315 275730 927.86 3158.1 776.45 3146.2 4820.2 7000.2 3617.8 2537.3 4056.7 2066.6 TRUE FALSE 998.897675 3001.273346 802.3364555 2889.145396 4630.934728 7266.597516 3142.778514 2868.933822 4409.544433 1999.167011 0.499656942 1.50126194 0.401335382 1.445174605 2.316432145 3.634812637 1.572044005 1.435064607 2.205690874 1 10.96518329 -6.025023895 4.585654806 2.097359172 0.869789654 0.368599577 0.71469785 0.220104424 11.48446221 0.218034931 0.302696095 9.44E-07 6.025023895 -1.227569517 DQHLNNS(ph)SSSPQR ddPTM_A459_MK2206_30min_R2 1 DQHLNNSSSSPQR 13 0 A0A5H1ZRS1;A0A4W8VX11;E7EV93;E9PGW9 A0A5H1ZRS1 PCM1 1 DQHLNNS(0.472)S(0.059)S(0.235)S(0.235)PQR 119.62 0.0026046 0 0 0 524.5 530.6 0 0 828.14 0 0 0 TRUE FALSE 0 0 541.9865682 487.2482827 0 0 719.4042232 0 0 0 0 DQHLNNSS(ph)SSPQR ddPTM_A459_MK2206_30min_R1 4 DQHLNNSSSSPQR 13 0 A0A5H1ZRS1;A0A4W8VX11;E7EV93;E9PGW9 A0A5H1ZRS1 PCM1 1 DQHLNNS(0.062)S(0.492)S(0.223)S(0.223)PQR;DQHLNNS(0.04)S(0.32)S(0.32)S(0.32)PQR;DQHLNNS(0.018)S(0.327)S(0.327)S(0.327)PQR;DQHLNNS(0.098)S(0.301)S(0.301)S(0.301)PQR 169.02 0.00017518 64967500 11883.4 10028.1 10529.7 8806.6 13104 10921.19 12813.2 10602.5 8321.4 8435 TRUE FALSE 10872.65443 9375.268867 9814.973301 9484.885858 12582.03993 11539.53834 11958.45481 10509.80346 9186.439308 9479.991481 1.146905506 0.988953301 1.035335667 1.000516285 1.327220595 1.217251974 1.261441514 1.108630053 0.969034553 1 13.21067005 -4.44173011 22.0040219 1.112100203 3.271833991 0.005304401 0.120909763 4114.82005 1190263.288 0.031431609 29579.0697 3.62E-05 4.44173011 2.159733788 DQHLNNSS(ph)SSPQR ddPTM_A459_MK2206_30min_R2 2 DQHLNNSSSSPQR 13 0 A0A5H1ZRS1;A0A4W8VX11;E7EV93;E9PGW9 A0A5H1ZRS1 PCM1 1 DQHLNNS(0.022)S(0.499)S(0.18)S(0.298)PQR;DQHLNNS(0.028)S(0.455)S(0.258)S(0.258)PQR 130.29 0.0010843 37710750 37070.7 57313.8 42059.2 62679.2 55686 70502.2 56238 52698 45674.7 53830.4 TRUE FALSE 39908.86129 54467.68003 43461.43274 57558.10886 53499.48784 73185.21062 48853.88305 59585.80954 49647.40285 52073.91846 0.766388674 1.045968532 0.834610377 1.105315493 1.027375881 1.405410094 0.938164142 1.144254385 0.953402477 1 15.66827335 -5.770963127 24.97164932 1.093207191 0.898687126 0.290737108 0.141466842 238.4124897 625127.8201 0.038390838 0.057782627 1.69E-06 5.770963127 -0.194520065 DQHLNNSSS(ph)SPQR ddPTM_A459_MK2206_30min_R1 3 DQHLNNSSSSPQR 13 0 A0A5H1ZRS1;A0A4W8VX11;E7EV93;E9PGW9 A0A5H1ZRS1 PCM1 1 DQHLNNS(0.006)S(0.099)S(0.795)S(0.099)PQR;DQHLNNS(0.02)S(0.009)S(0.486)S(0.486)PQR;DQHLNNS(0.011)S(0.036)S(0.726)S(0.227)PQR 136.33 0.0010997 26777660 1297.34 937.13 1125.95 1057.07 1535.56 1244.65 1344.61 1152.09 1138.97 885.28 TRUE FALSE 1186.99442 876.1226667 1049.523651 1138.485715 1474.395394 1315.121007 1254.91352 1142.017399 1257.370007 994.9551699 1.193012968 0.880564967 1.054845166 1.144258303 1.481871182 1.321789209 1.261276446 1.147807894 1.263745388 1 9.958487713 -5.935605976 4.111738102 1.262108863 1.029213375 0.302549379 0.135898677 0.232876852 7.931385973 0.039024023 0.058934639 1.16E-06 5.935605976 -0.232895487 DQHLNNSSS(ph)SPQR ddPTM_A459_MK2206_30min_R2 4 DQHLNNSSSSPQR 13 0 A0A5H1ZRS1;A0A4W8VX11;E7EV93;E9PGW9 A0A5H1ZRS1 PCM1 1 DQHLNNS(0.023)S(0.012)S(0.733)S(0.231)PQR;DQHLNNS(0.002)S(0.025)S(0.889)S(0.084)PQR;DQHLNNS(0.017)S(0.142)S(0.421)S(0.421)PQR;DQHLNNS(0.194)S(0.103)S(0.351)S(0.351)PQR 230.96 3.80E-13 42200700 25256.78 31517.9 24844.82 36423.42 37434.6 35308.88 35745.5 29305.05 30332.84 33380.45 TRUE FALSE 27190.4585 29952.76692 25673.1339 33447.51007 35964.72951 36652.58417 31052.07291 33135.32065 32971.13559 32291.24865 0.842038002 0.927581564 0.795049277 1.035807269 1.11376088 1.135062461 0.961625029 1.026139342 1.021054836 1 14.97885561 -5.779613809 21.52314646 1.046539374 0.862158995 0.69501181 0.056657666 26.34947596 31204.39652 0.016650731 0.024792861 1.66E-06 5.779613809 -0.184380379 DQHLNNSSSS(ph)PQR ddPTM_A459_MK2206_30min_R1 1 DQHLNNSSSSPQR 13 0 A0A5H1ZRS1;A0A4W8VX11;E7EV93;E9PGW9 A0A5H1ZRS1 PCM1 1 DQHLNNSS(0.008)S(0.226)S(0.766)PQR 158.31 0.00036465 6857300 3539.7 2207.3 2701.4 2271.4 3117.6 3202.3 3839.6 2741.3 2195.9 2320.5 TRUE FALSE 3238.629927 2063.604369 2518.036495 2446.343622 2993.41939 3383.611459 3583.46729 2717.333103 2424.171663 2607.981059 1.241814973 0.791265091 0.965511803 0.938022005 1.147791845 1.297406454 1.374038848 1.041929769 0.929520425 1 11.34871768 -6.269486119 22.15655012 1.154271907 0.969044176 0.155438692 0.1620941 203.1850535 559465.0716 0.051720309 0.059874824 5.38E-07 6.269486119 -0.185227731 DQHLNNSSSS(ph)PQR ddPTM_A459_MK2206_30min_R2 1 DQHLNNSSSSPQR 13 0 A0A5H1ZRS1;A0A4W8VX11;E7EV93;E9PGW9 A0A5H1ZRS1 PCM1 1 DQHLNNSS(0.002)S(0.07)S(0.928)PQR 279.71 1.65E-48 30062000 9797.2 15261 11018 17247 17848 16916 18810 15062 13413 13235 TRUE FALSE 10547.28116 14503.16093 11385.33462 15837.86493 17147.19784 17559.75023 16340.22441 17030.65512 14579.63849 12803.14303 0.823804056 1.132781294 0.88926091 1.237029446 1.339295968 1.371518711 1.276266645 1.330193303 1.138754637 1 13.6442104 -5.815924988 6.942975558 1.267969884 0.967455401 0.517741283 0.127682391 0.149539029 15.09402212 0.03412979 0.05136228 1.53E-06 5.815924988 -0.300514484 DQLIYNLLK ddPTM_A459_MK2206_30min_R1 1 DQLIYNLLK 9 0 P00338;P00338-3;P00338-5;P00338-4;P00338-2;F5GYU2;F5GXY2;F5GXH2;F5H5J4;F5H6W8;F5GZQ4;F5H8H6;F5GXC7;F5GWW2;F5GXU1 P00338 LDHA L-lactate dehydrogenase A chain 0 186.16 0.029194 17706000 4988.7 5484.9 4254.3 4014.4 4460.7 4647 5184.5 4764.5 4533.7 4795.9 FALSE TRUE 4564.384868 5127.832013 3965.529969 4323.589784 4283.020873 4910.109124 4838.651465 4722.844479 5004.994339 5390.052299 0.846816434 0.951351068 0.735712707 0.802142455 0.794615828 0.910957603 0.897700281 0.876214964 0.928561368 1 12.39608356 -6.776515443 24.31200804 0.913388662 0.826728992 0.393755563 0.059346054 212.1437824 342105.1643 0.021568654 0.019102225 1.67E-07 6.776515443 -0.086659671 DQLIYNLLK ddPTM_A459_MK2206_30min_R2 1 DQLIYNLLK 9 0 P00338;P00338-3;P00338-5;P00338-4;P00338-2;F5GYU2;F5GXY2;F5GXH2;F5H5J4;F5H6W8;F5GZQ4;F5H8H6;F5GXC7;F5GWW2;F5GXU1 P00338 LDHA L-lactate dehydrogenase A chain 0 142.92 0.028781 4546100 30445 41133 34967 40858 34049 34745 42147 32508 29271 39562 FALSE TRUE 32775.89261 39090.39503 36132.78233 37519.7707 32712.06518 36067.24532 36613.04827 36756.90722 31816.93867 38271.09518 0.856413762 1.021407797 0.94412721 0.980368357 0.854745991 0.942414769 0.956676262 0.960435207 0.83135689 1 15.22396757 DQMEGS(ph)PNSSESFEHIAR ddPTM_A459_MK2206_30min_R2 2 DQMEGSPNSSESFEHIAR 18 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 DQMEGS(0.981)PNS(0.018)S(0.001)ESFEHIAR;DQMEGS(0.984)PNS(0.015)SESFEHIAR 109.67 0.00094727 20911400 49563 49766 50001 59917 64820 67511 66774 43270 51951 56522 TRUE FALSE 53357.58139 47294.69281 51668.00838 55021.58944 62274.84111 70080.17841 58006.49359 48925.53757 56469.60407 54677.69177 0.975856509 0.864972373 0.944955917 1.006289542 1.138944222 1.281695992 1.060880438 0.894798884 1.032772274 1 15.73866472 -5.883854072 3.131578817 1.07310274 0.92015616 0.29136303 0.096842007 0.337712461 6.593860885 0.032076348 0.051119597 1.31E-06 5.883854072 -0.152946581 DQMEGSPNS(ph)SESFEHIAR ddPTM_A459_MK2206_30min_R2 1 DQMEGSPNSSESFEHIAR 18 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 DQMEGS(0.042)PNS(0.707)S(0.221)ES(0.029)FEHIAR 91.065 0.00551 5002600 8379.8 9304.1 8024.7 11641 8884.7 9546.3 9899.4 7264.7 9245.5 8388.2 TRUE FALSE 9021.363931 8842.071923 8292.239493 10689.89306 8535.842036 9909.591136 8599.596889 8214.221233 10049.65688 8114.493721 1.111759309 1.089664029 1.021904727 1.317382628 1.051925398 1.221221123 1.059782309 1.012290047 1.238482304 1 12.98628537 -10.48226478 7.375291003 0.999999997 1.121982526 0.129893287 0.096734467 3.95E-09 4.53E-10 0.089667532 0.021747571 3.29E-11 10.48226478 0.121982529 DQMEGSPNSSES(ph)FEHIAR ddPTM_A459_MK2206_30min_R1 2 DQMEGSPNSSESFEHIAR 18 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 DQMEGS(0.206)PNS(0.206)S(0.206)ES(0.383)FEHIAR;DQMEGS(0.037)PNS(0.075)S(0.082)ES(0.806)FEHIAR 236.27 8.18E-25 5797100 2181.91 1401.54 1349.76 1408.71 2003.47 1952.97 2240.03 1899.46 1795.86 1709.21 TRUE FALSE 1996.327097 1310.299491 1258.142052 1517.209088 1923.667547 2063.545474 2090.601686 1882.853221 1982.546074 1920.959839 1.039234167 0.682106656 0.654954896 0.789818224 1.00140956 1.074226245 1.088310981 0.980162721 1.032060137 1 10.90761164 -6.281949575 4.203806874 1.036460831 0.771640754 0.569873999 0.101029289 0.149230242 6.375461844 0.032046657 0.038486826 5.22E-07 6.281949575 -0.264820077 DQMEGSPNSSESFEHIAR ddPTM_A459_MK2206_30min_R1 1 DQMEGSPNSSESFEHIAR 18 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 0 115.91 0.002396 0 1768.7 1246.5 1358.7 1264.1 1908.1 1953.9 2155.8 1488.8 1276.4 1022.1 FALSE TRUE 1618.262777 1165.352623 1266.47523 1361.461201 1832.096337 2064.528129 2011.990515 1475.783579 1409.086348 1148.725464 1.408746326 1.014474441 1.102504705 1.185192845 1.594894858 1.797233711 1.751498141 1.284713906 1.226651964 1 10.16581833 -6.214847392 8.210639885 1.489804689 1.159758465 0.200537856 0.247434879 0.470524061 77.15160867 0.076099006 0.098012009 6.10E-07 6.214847392 -0.330046223 DQMSHLFNVAHTLR ddPTM_A459_MK2206_30min_R1 2 DQMSHLFNVAHTLR 14 0 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 0 ; 128.73 0.00060013 16022800 6724.9 5989.6 6575.3 6073.7 7008.7 6765.1 7124.9 5897.8 5197.5 4827.3 FALSE TRUE 6152.911941 5599.675951 6128.986956 6541.497426 6729.528638 7148.134116 6649.610921 5846.236156 5737.798724 5425.342368 1.134105744 1.032133195 1.129695886 1.205729884 1.240387828 1.317545259 1.225657382 1.077579212 1.057592007 1 12.40549847 -7.908541916 4.652038368 1.039879416 1.183565062 0.435131527 0.073362383 0.243333696 9.095824439 0.050625403 0.023048626 1.23E-08 7.908541916 0.143685646 DQPAFTPSGILT(ph)PHALGSR ddPTM_A459_MK2206_30min_R1 2 DQPAFTPSGILTPHALGSR 19 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 DQPAFTPS(0.003)GILT(0.997)PHALGSR;DQPAFTPS(0.001)GILT(0.999)PHALGSR 180.7 6.24E-13 40369000 7185.1 5501.2 6365 4952 6246.2 5673.4 5964.9 5069.6 4305.3 3923.6 TRUE FALSE 6573.969515 5143.07088 5932.961534 5333.403898 5997.400627 5994.623005 5566.992405 5025.277022 4752.851342 4409.68519 1.490802457 1.166312482 1.345438796 1.209474978 1.360051879 1.359421988 1.262446675 1.13959995 1.077821009 1 12.10645995 -7.960257945 1.605533386 1.021091639 1.313673969 0.64900236 0.084520918 0.243863754 1.135728023 0.069803004 0.023769137 1.10E-08 7.960257945 0.292582329 DQPAFTPSGILT(ph)PHALGSR ddPTM_A459_MK2206_30min_R2 4 DQPAFTPSGILTPHALGSR 19 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 DQPAFTPS(0.001)GILT(0.987)PHALGS(0.012)R;DQPAFTPSGILT(1)PHALGSR;DQPAFTPSGILT(0.999)PHALGS(0.001)R;DQPAFT(0.001)PS(0.007)GILT(0.992)PHALGSR 146.2 6.40E-05 52374900 112820 140604 121075 147443 139752 136422 124647 92423 115259 120044 TRUE FALSE 121457.5859 133621.8098 125111.5801 135396.4353 134264.6343 141613.6348 108280.6992 104503.0034 125284.0195 116126.9741 1.045903304 1.150652644 1.077368811 1.165934412 1.156188175 1.219472357 0.932433657 0.899902923 1.078853733 1 16.8253436 -7.271333528 24.99466316 0.969456148 1.136213781 0.604052478 0.06257041 464.220978 1172713.658 0.025912785 0.017709554 5.35E-08 7.271333528 0.166757633 DQPDGSSLS(ph)PAQSPSQSQPPAASSLR ddPTM_A459_MK2206_30min_R2 1 DQPDGSSLSPAQSPSQSQPPAASSLR 26 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 DQPDGS(0.014)S(0.036)LS(0.949)PAQS(0.001)PSQSQPPAASSLR 117.85 1.90E-07 0 5828.6 5774.5 7839 7843.5 10686 7515.5 9083.3 5783.6 5690.1 7724.7 TRUE FALSE 6274.842097 5487.746727 8100.348348 7202.66096 10266.41395 7801.507619 7890.651799 6539.536378 6185.014613 7472.643672 0.839708458 0.734378216 1.084000349 0.963870522 1.373866385 1.04400905 1.055938453 0.87513023 0.827687614 1 12.86740301 -5.261984069 24.99981012 1.035225805 0.787043324 0.318337837 0.140763962 56.43441244 2590335.756 0.039034061 0.090004391 5.47E-06 5.261984069 -0.248182481 DQPDGSSLSPAQSPS(ph)QSQPPAASSLREPGLESK ddPTM_A459_MK2206_30min_R2 2 DQPDGSSLSPAQSPSQSQPPAASSLREPGLESK 33 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 DQPDGS(0.033)S(0.026)LS(0.2)PAQS(0.158)PS(0.435)QS(0.144)QPPAAS(0.003)S(0.001)LREPGLESK;DQPDGS(0.029)S(0.085)LS(0.179)PAQS(0.043)PS(0.538)QS(0.127)QPPAASSLREPGLESK 97.408 3.99E-11 35748000 50220 88459 80622 90355 100409 83920 93725 71302 83822 85032 TRUE FALSE 54064.88181 84066.25469 83309.89724 82972.70747 96466.43815 87113.63441 81418.79492 80621.41622 91112.68604 82257.4128 0.657264555 1.021990017 1.01279501 1.008695808 1.172738539 1.059036887 0.989804957 0.980111256 1.107653194 1 16.32785808 -4.759623995 5.153304711 1.04149503 0.634027299 0.804543307 0.056546741 0.074101435 5.464640937 0.014727607 0.109234895 1.74E-05 4.759623995 -0.407467731 DQQEAALVDMVNDGVEDLR ddPTM_A459_MK2206_30min_R1 6 DQQEAALVDMVNDGVEDLR 19 0 P09211;A8MX94 P09211 GSTP1 Glutathione S-transferase P 0 ;;;;; 251.91 2.78E-64 30817000 4671.17 5132.33 4958.85 4856.69 5702.24 4589.76 5727.21 5581.11 4827.31 4557.28 FALSE TRUE 4273.862462 4798.214384 4622.257078 5230.753105 5475.107706 4849.628245 5345.158271 5532.314944 5329.126149 5121.870252 0.834433957 0.936809046 0.902454934 1.021258417 1.068966498 0.946847149 1.043595017 1.080135707 1.040464886 1 12.32245499 -5.111003446 0.751146516 1.038564157 0.78444639 0.685503563 0.042469278 1.116593898 0.65483722 0.018527115 0.220987577 7.74E-06 5.111003446 -0.254117767 DQQEAALVDMVNDGVEDLR ddPTM_A459_MK2206_30min_R2 4 DQQEAALVDMVNDGVEDLR 19 0 P09211;A8MX94 P09211 GSTP1 Glutathione S-transferase P 0 ;;; 239.19 1.34E-28 16832900 37095.9 51391.6 48505.2 46850.4 43291.7 44351.2 50531.8 43443 46650.4 40139.3 FALSE TRUE 39935.99063 48839.56787 50122.33916 43022.57245 41591.85033 46039.01599 43896.91396 49121.14926 50707.96747 38829.55793 1.028494599 1.257793559 1.290829508 1.107985121 1.071138909 1.185669332 1.130502542 1.265045287 1.305911532 1 15.24486766 -7.746356062 24.98426225 1.214108833 1.158871431 0.008522592 0.106240686 782.705916 1296491.13 0.050012847 0.028727671 1.79E-08 7.746356062 -0.055237402 DQQNLPYGVTPAS(ph)PSGHSQGR ddPTM_A459_MK2206_30min_R1 1 DQQNLPYGVTPASPSGHSQGR 21 0 Q7KZI7-14;E9PC69;Q7KZI7-13;E7ETY4;Q7KZI7-15;Q7KZI7-16;Q7KZI7-3;Q7KZI7-9;Q7KZI7-8;Q7KZI7-11;Q7KZI7-6;Q7KZI7;Q7KZI7-12;Q7KZI7-4;Q7KZI7-5;Q7KZI7-2;Q7KZI7-7;Q7KZI7-10 Q7KZI7-14 MARK2 Serine/threonine-protein kinase MARK2 1 DQQNLPYGVT(0.025)PAS(0.946)PS(0.028)GHS(0.001)QGR 150.64 1.73E-06 6343600 2822.2 1337 1748.7 1526.8 2615.8 2538.3 2474 2073.6 1691 1570 TRUE FALSE 2582.15707 1249.961057 1630.003116 1644.394401 2511.607147 2682.016352 2308.963974 2055.470734 1866.785501 1764.503453 1.463390205 0.708392525 0.923774399 0.931930395 1.423407329 1.519983624 1.308563024 1.164900375 1.057966477 1 10.78504654 -6.248147126 24.61798147 1.270895477 0.979616373 0.197386917 0.230146368 903.8112223 1673906.781 0.068732377 0.088192375 5.65E-07 6.248147126 -0.291279104 DQQNLPYGVTPAS(ph)PSGHSQGR ddPTM_A459_MK2206_30min_R2 2 DQQNLPYGVTPASPSGHSQGR 21 0 Q7KZI7-14;E9PC69;Q7KZI7-13;E7ETY4;Q7KZI7-15;Q7KZI7-16;Q7KZI7-3;Q7KZI7-9;Q7KZI7-8;Q7KZI7-11;Q7KZI7-6;Q7KZI7;Q7KZI7-12;Q7KZI7-4;Q7KZI7-5;Q7KZI7-2;Q7KZI7-7;Q7KZI7-10 Q7KZI7-14 MARK2 Serine/threonine-protein kinase MARK2 1 DQQNLPYGVT(0.001)PAS(0.983)PS(0.006)GHS(0.011)QGR;DQQNLPYGVTPAS(0.954)PS(0.043)GHS(0.003)QGR 135.03 2.52E-05 47460000 39948 48364 35865 52409 52637 57234 50913 39819 42458 45815 TRUE FALSE 43006.44959 45962.31409 37060.7212 48127.01705 50570.2069 59412.07998 44228.06194 45023.48002 46150.92009 44320.0603 0.97036081 1.037054412 0.836206471 1.085896922 1.141022971 1.340523446 0.997924228 1.015871362 1.041309957 1 15.43567222 -5.910007307 10.87611737 1.099591139 0.956934703 0.268341392 0.105641897 0.569823497 64.82197488 0.03150991 0.046771161 1.23E-06 5.910007307 -0.142656435 DQS(ph)IVALGWSGAGK ddPTM_A459_MK2206_30min_R1 1 DQSIVALGWSGAGK 14 0 F5H6I8;Q8IUG5-2;Q8IUG5;Q8IUG5-3 F5H6I8 MYO18B Unconventional myosin-XVIIIb 1 DQS(1)IVALGWSGAGK 80.469 0.033911 24195000 2768.6 2503.4 2714.9 2243.1 2128.4 1483.2 1957.5 1904.1 2150.9 1805.2 TRUE FALSE 2533.116032 2340.428205 2530.620152 2415.863951 2043.621321 1567.177502 1826.918747 1887.452654 2374.493752 2028.841805 1.248552758 1.15357846 1.247322559 1.19076014 1.007284706 0.772449335 0.90047373 0.930310412 1.170369098 1 10.98644066 -6.312011435 3.8122021 0.942546173 1.211085361 0.611886836 0.096505969 0.157363436 4.760625852 0.031802427 0.037550963 4.88E-07 6.312011435 0.268539189 DQS(ph)PFSK ddPTM_A459_MK2206_30min_R1 4 DQSPFSK 7 0 Q13427;E9PG73 Q13427 PPIG Peptidyl-prolyl cis-trans isomerase G 1 DQS(0.983)PFS(0.017)K;DQS(0.983)PFS(0.017)K;DQS(0.981)PFS(0.019)K;DQS(0.956)PFS(0.044)K 147.4 0.0029651 939190000 39851.5 46338 44407.5 37968.3 35902.2 31592.4 38422 37603 32505.4 35571.5 TRUE FALSE 36461.92066 43321.38778 41393.24263 40892.62504 34472.13935 33381.13439 35858.93848 37274.24094 35884.45265 39978.36597 0.912041295 1.083620772 1.035391058 1.022868845 0.862269843 0.834979959 0.896958583 0.932360291 0.897596782 1 15.28693189 -6.252160592 24.68060789 0.896839761 1.020055563 0.462321018 0.057338256 453.9203104 1207379.693 0.016780272 0.021355018 5.60E-07 6.252160592 0.123215802 DQS(ph)PFSK ddPTM_A459_MK2206_30min_R2 6 DQSPFSK 7 0 Q13427;E9PG73 Q13427 PPIG Peptidyl-prolyl cis-trans isomerase G 1 DQS(0.5)PFS(0.5)K;DQS(0.983)PFS(0.017)K;DQS(0.921)PFS(0.079)K;DQS(0.93)PFS(0.07)K;DQS(0.98)PFS(0.02)K;DQS(0.943)PFS(0.057)K 134.23 0.0029581 1521112000 2869430 3051410 2990800 3109480 2888460 2126498 3351820 2573460 2238870 2910850 TRUE FALSE 3089115.767 2899881.417 3090511.779 2855425.537 2775044.547 2207423.371 2911722.008 2909820.058 2433602.866 2815869.203 1.097038088 1.029835268 1.097533854 1.014047646 0.985501935 0.783922552 1.034040219 1.03336478 0.864245705 1 21.42514889 -6.133187396 2.692208363 0.946913939 1.068985902 0.359507341 0.074755733 0.328942381 4.630267218 0.023957412 0.032876462 7.36E-07 6.133187396 0.122071963 DQS(ph)PSRAPGLR ddPTM_A459_MK2206_30min_R1 2 DQSPSRAPGLR 11 1 P09601 P09601 HMOX1 Heme oxygenase 1 1 DQS(0.94)PS(0.06)RAPGLR;DQS(0.905)PS(0.095)RAPGLR 134.61 0.007574 188200000 11967.4 12198.6 10784.4 12061 14817 10030.7 11583.5 13059 9013.8 6846.4 TRUE FALSE 10949.50979 11404.46892 10052.38498 12989.94031 14226.80751 10598.62957 10810.78585 12944.82654 9950.816766 7694.58372 1.423015225 1.482142418 1.306423498 1.688192732 1.848937907 1.377414289 1.404986448 1.682329676 1.293223536 1 12.90962756 -8.542705684 5.026342068 1.000216142 1.523967793 0.519822067 0.159017639 0.137443672 14.78909 0.160707001 0.041797291 2.87E-09 8.542705684 0.52375165 DQS(ph)PSRAPGLR ddPTM_A459_MK2206_30min_R2 1 DQSPSRAPGLR 11 1 P09601 P09601 HMOX1 Heme oxygenase 1 1 DQS(0.798)PS(0.202)RAPGLR 110.51 0.04168 82955000 59865 74055 74150 75541 80120 76749 76216 55045 88752 63976 TRUE FALSE 64448.31043 70377.53639 76622.12399 69369.05866 76974.08623 79669.73698 66208.74765 62239.5705 96471.48853 61888.46836 1.041362182 1.137167202 1.238067867 1.120872119 1.243754907 1.287311499 1.069807501 1.005673143 1.558795864 1 15.917383 -4.864946439 3.194879824 1.189424673 1.03250992 0.079573755 0.154987278 0.78566174 13.26875759 0.037771126 0.277182614 1.36E-05 4.864946439 -0.156914754 DQS(ph)TPIIEVEGPLLSDTHVTFK ddPTM_A459_MK2206_30min_R1 2 DQSTPIIEVEGPLLSDTHVTFK 22 0 P49116;P49116-2 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 DQS(0.596)T(0.404)PIIEVEGPLLSDTHVTFK;DQS(0.5)T(0.5)PIIEVEGPLLSDTHVTFK 195.39 2.57E-22 6253700 2214.78 1177.32 1538.93 1081.87 3066.4 2449.84 2459.22 2119.78 1533.51 1110.33 TRUE FALSE 2026.401331 1100.676254 1434.471719 1165.195815 2944.258795 2588.547824 2295.169921 2101.246987 1692.923852 1247.886063 1.623867267 0.882032652 1.149521388 0.933735739 2.359397129 2.074346289 1.839246378 1.683845224 1.356633352 1 10.2852705 -6.237314184 24.84322458 1.776892228 1.128501761 0.327636216 0.395604062 775.5642652 798647.0179 0.116303029 0.150067302 5.79E-07 6.237314184 -0.648390467 DQSEQETSDADQHVTSNAS(ph)DSESSYR ddPTM_A459_MK2206_30min_R2 1 DQSEQETSDADQHVTSNASDSESSYR 26 0 A0A590UJ08;A0A0C4DFT3;A0A590UJD9;Q12959-4;Q12959-2 A0A590UJ08 DLG1 Disks large homolog 1 1 DQSEQETSDADQHVT(0.004)S(0.19)NAS(0.681)DS(0.084)ES(0.03)S(0.011)YR 117.53 5.14E-09 6083800 8321.3 9322.5 9748.3 12900 9154.2 11501 11711 10346 8835.4 11300 TRUE FALSE 8958.385126 8859.558206 10073.30346 11846.02873 8794.760112 11938.67861 10173.33163 11698.25772 9603.887121 10931.28193 0.819518258 0.810477515 0.921511633 1.083681568 0.804549747 1.092157232 0.930662268 1.07016339 0.878569155 1 13.41617498 -5.395077812 3.895217573 0.979601867 0.815535414 0.357145334 0.087157608 0.229646224 5.979378923 0.021634877 0.04861891 4.03E-06 5.395077812 -0.164066454 DQSPPEDSGESEADLECSFAAIHS(ph)PAPPPDPAPR ddPTM_A459_MK2206_30min_R2 1 DQSPPEDSGESEADLECSFAAIHSPAPPPDPAPR 34 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 DQSPPEDSGESEADLECS(0.002)FAAIHS(0.998)PAPPPDPAPR 120.52 3.83E-19 2854400 5838.4 7898 7242.8 7790.9 7943.5 6963 6077.2 5405.2 6032 5271 TRUE FALSE 6285.392393 7505.796805 7484.271337 7154.358548 7631.598277 7227.981844 5279.25634 6111.678199 6556.652457 5099.007702 1.232669719 1.47201127 1.467789769 1.403088398 1.496683026 1.417527148 1.035349748 1.198601484 1.285868318 1 12.3160008 -7.245219619 24.10961751 1.146505023 1.423130963 0.653754971 0.101221335 318.149571 472909.1463 0.038158317 0.029452586 5.69E-08 7.245219619 0.27662594 DQSPS(ph)RAPGLR ddPTM_A459_MK2206_30min_R1 1 DQSPSRAPGLR 11 1 P09601 P09601 HMOX1 Heme oxygenase 1 1 DQS(0.411)PS(0.589)RAPGLR 120.29 0.022663 38099000 8511.8 8460.8 7027.5 7565.1 10211 7188.2 7480 9568.2 6584.6 4812.2 TRUE FALSE 7787.826713 7910.000382 6550.49288 8147.765313 9804.274248 7595.189672 6981.022848 9484.546236 7269.092733 5408.371666 1.439957753 1.462547486 1.21117654 1.506509873 1.812795949 1.404339446 1.2907809 1.753678708 1.3440446 1 12.40097858 -8.539936247 23.22510414 0.999999991 1.482226049 0.417130525 0.173756142 1315.513428 1791172.416 0.171306613 0.044231177 2.88E-09 8.539936247 0.482226059 DQT(ph)ASAPATPLVNK ddPTM_A459_MK2206_30min_R1 2 DQTASAPATPLVNK 14 0 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 DQT(0.47)AS(0.47)APAT(0.06)PLVNK;DQT(0.885)AS(0.111)APAT(0.004)PLVNK 175.7 1.52E-09 12160000 7158.9 7628.7 7068.9 6106 7121.3 6087.2 7062.8 7397.6 6293.5 5929.9 TRUE FALSE 6549.997962 7132.070243 6589.082763 6576.285178 6837.643541 6431.852004 6591.653499 7332.923563 6947.731847 6664.54078 0.982813097 1.07015179 0.988677687 0.986757437 1.025973697 0.96508555 0.98906342 1.100289398 1.04249221 1 12.70228975 -7.734303978 24.99990785 1.05354317 1.002392845 0.257237228 0.035646865 256.4520495 236270.3073 0.016509399 0.0095286 1.84E-08 7.734303978 -0.051150326 DQTASAPAT(ph)PLVNK ddPTM_A459_MK2206_30min_R2 3 DQTASAPATPLVNK 14 0 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 DQT(0.002)AS(0.202)APAT(0.797)PLVNK;DQT(0.002)AS(0.056)APAT(0.942)PLVNK;DQT(0.021)AS(0.003)APAT(0.976)PLVNK 162.64 0.000641 43309600 173865 203757 182688 198544 178367 171037 196677 158803 173872 189509 TRUE FALSE 187176.2381 193638.7237 188778.7267 182322.3201 171363.4154 177545.9329 170853.0736 179559.0974 188995.0723 183325.3369 1.021005832 1.056257291 1.029747061 0.994528761 0.934750309 0.968474603 0.931966506 0.979455979 1.030927179 1 17.48404666 -5.844276991 3.274905479 0.970457536 1.038953376 0.477327615 0.028462747 0.196720283 4.200708027 0.008530566 0.013830419 1.43E-06 5.844276991 0.068495839 DQTDFEHR ddPTM_A459_MK2206_30min_R2 1 DQTDFEHR 8 0 F8VZI0;A0A2R8Y891;P08237-2;P08237;P08237-3 F8VZI0 PFKM "ATP-dependent 6-phosphofructokinase, muscle type" 0 120.31 0.010468 1902200 17427 23328 17227 23264 22792 19134 17121 16966 17790 23604 FALSE TRUE 18761.22452 22169.56544 17801.33958 21363.25678 21897.07156 19862.15778 14872.99213 19183.51445 19337.34204 22833.80341 0.821642552 0.970909885 0.779604662 0.935597824 0.958976092 0.869857615 0.651358508 0.840136621 0.846873457 1 14.47888357 -7.013792064 24.97870265 0.812604183 0.895756964 0.057733171 0.096574321 1290.951238 2338029.881 0.03469905 0.028064849 9.69E-08 7.013792064 0.083152781 DQTPAPKT(ph)PNR ddPTM_A459_MK2206_30min_R1 1 DQTPAPKTPNR 11 1 Q9BYW2 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 DQT(0.006)PAPKT(0.994)PNR 135.04 0.015859 1700600 1462.2 1347.1 1112.6 1483 1496.8 1310.5 1442 1471.4 1120.1 1106.4 TRUE FALSE 1337.832212 1259.403545 1037.079812 1597.220917 1437.179286 1384.699377 1345.806811 1458.535705 1236.538403 1243.469185 1.075886904 1.012814439 0.834021321 1.284487735 1.155781988 1.113577557 1.08230009 1.172956855 0.994426254 1 10.28015504 -5.757052861 24.99993244 1.122300325 0.978098294 0.302802185 0.097212761 134.3653739 765771.1302 0.026363467 0.043715773 1.75E-06 5.757052861 -0.144202031 DQTPAPKT(ph)PNR ddPTM_A459_MK2206_30min_R2 1 DQTPAPKTPNR 11 1 Q9BYW2 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 DQTPAPKT(1)PNR 115.24 0.044145 0 2143.5 4351.4 2621.6 4562.6 3722.1 910.37 4035.6 1192.5 2511.9 3062.1 TRUE FALSE 2307.608008 4135.315804 2709.002836 4189.820985 3575.951652 945.0147683 3505.720872 1348.363844 2730.380522 2962.183928 0.779022527 1.396036136 0.914528909 1.414436472 1.207201085 0.319026364 1.183491963 0.455192479 0.921745775 1 11.53244551 DQVANS(ph)AFVER ddPTM_A459_MK2206_30min_R1 1 DQVANSAFVER 11 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 DQVANS(1)AFVER 121.92 0.0043007 8004600 1702.6 1486.6 1478.8 1190.1 1697.3 1338.2 1827.1 1404.1 1417.2 1204.2 TRUE FALSE 1557.784929 1389.82207 1378.423176 1281.761708 1629.692947 1413.967728 1705.217493 1391.824102 1564.523011 1353.385387 1.151028335 1.026922622 1.018500118 0.947078135 1.204160295 1.044763554 1.259964463 1.028401899 1.156007022 1 10.402357 -6.262808718 24.99994353 1.120651078 1.034000743 0.161852387 0.088317006 212.4113142 3877982.391 0.02558821 0.030680437 5.46E-07 6.262808718 -0.086650335 DQVANSAFVER ddPTM_A459_MK2206_30min_R1 2 DQVANSAFVER 11 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 236.22 3.86E-09 67996000 3162.7 3365.1 3323.6 2976.36 3470.3 3431.7 3261.8 3565.5 2885.6 3092.5 FALSE TRUE 2893.695757 3146.031378 3098.003292 3205.599763 3332.070603 3625.999888 3044.211273 3534.327209 3185.568446 3475.622247 0.83256912 0.905170687 0.89135213 0.9223096 0.95869757 1.043266394 0.875875183 1.01689049 0.916546224 1 11.76305557 -5.633421569 1.065413095 0.968755627 0.852787687 0.439241406 0.047645477 0.624996114 1.278759305 0.016855369 0.059703802 2.33E-06 5.633421569 -0.11596794 DQVANSAFVER ddPTM_A459_MK2206_30min_R2 2 DQVANSAFVER 11 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 211.63 0.00026736 65636000 153522 170404 147891 166827 156263 133973 158489 139781 130940 148393 FALSE TRUE 165275.7624 161941.9852 152821.6121 153196.7004 150127.3295 139071.4364 137679.2039 158050.8566 142328.9245 143550.9486 1.151338699 1.128115047 1.064580998 1.067193926 1.045812173 0.968794966 0.959096441 1.101008793 0.991487175 1 17.13120334 -5.411030348 0.873655387 1.009726009 1.173298328 0.632788092 0.038435423 0.748656165 0.816034162 0.01609692 0.098394041 3.88E-06 5.411030348 0.163572319 DQVDGVLS(ph)LER ddPTM_A459_MK2206_30min_R2 1 DQVDGVLSLER 11 0 H7C494 H7C494 DNAJB14 1 DQVDGVLS(1)LER 99.161 0.017531 1071600 10483 12783 6521.9 7959.3 8089.8 8419.3 10482 6538.9 6303.4 7705.8 TRUE FALSE 11285.58654 12148.21481 6739.336891 7308.999729 7772.153804 8739.702361 9105.700809 7393.556681 6851.658338 7454.360377 1.513957733 1.629679033 0.904079834 0.980499917 1.042631884 1.172428206 1.221526777 0.991843204 0.919147719 1 12.86386885 -5.256341831 24.99658651 1.039478661 1.571818439 0.828149074 0.098813652 171.9727155 843287.0044 0.027876896 0.069166939 5.54E-06 5.256341831 0.532339778 DQVTAQEIFQDNHEDGPTAK ddPTM_A459_MK2206_30min_R2 1 DQVTAQEIFQDNHEDGPTAK 20 0 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 0 91.964 0.002063 2446400 24282 27242 23001 28623 25676 23255 22892 15206 17940 23974 FALSE TRUE 26141.04859 25889.20189 23767.84186 26284.40934 24667.83123 24139.98532 19886.2529 17193.47641 19500.38877 23191.73034 1.127171117 1.116311785 1.024841248 1.133352663 1.063647725 1.040887634 0.85747172 0.74136238 0.840833715 1 14.50132284 -7.206293644 3.051038644 0.834256542 1.09046448 0.728403283 0.06716007 0.12426014 2.300153918 0.028001276 0.020003192 6.22E-08 7.206293644 0.256207938 DRAS(ph)PAAAEEVVPEWASCLK ddPTM_A459_MK2206_30min_R1 4 DRASPAAAEEVVPEWASCLK 20 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 DRAS(1)PAAAEEVVPEWASCLK;DRAS(1)PAAAEEVVPEWASCLK;DRAS(1)PAAAEEVVPEWASCLK;DRAS(1)PAAAEEVVPEWASCLK 161.04 4.36E-07 322873000 31807.7 33266 35567.5 29709.2 34970.1 30326.4 33208.2 32629.3 28190.2 28712.2 TRUE FALSE 29102.28809 31100.37735 33153.2772 31997.40773 33577.16687 32043.45456 30992.94157 32344.02547 31120.67217 32269.2841 0.901857258 0.96377649 1.027394258 0.991574763 1.040530269 0.993001718 0.960447138 1.002316177 0.96440541 1 14.97787395 -4.866543884 3.229255222 0.997417662 0.896565646 0.612357351 0.023213332 0.192274511 3.332053726 0.006062451 0.04366457 1.36E-05 4.866543884 -0.100852015 DRAS(ph)PAAAEEVVPEWASCLK ddPTM_A459_MK2206_30min_R2 5 DRASPAAAEEVVPEWASCLK 20 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 DRAS(1)PAAAEEVVPEWASCLK;DRAS(1)PAAAEEVVPEWASCLK;DRAS(1)PAAAEEVVPEWASCLK;DRAS(1)PAAAEEVVPEWASCLK;DRAS(1)PAAAEEVVPEWASCLK 143.32 2.34E-05 211745000 236953 278491 247946 262557 281871 246796 292439 231864 232033 263615 TRUE FALSE 255094.3039 264661.5419 256212.3959 241105.2532 270803.3283 256187.9947 254041.408 262169.4209 252214.8109 255013.2641 1.000317786 1.037834415 1.004702233 0.945461618 1.061918599 1.004606547 0.996188998 1.0280619 0.989026244 1 17.96021276 -5.449226688 24.99620748 1.004489498 1.019624216 0.042446308 0.028931954 497.3804685 168799.4791 0.007470979 0.015552048 3.55E-06 5.449226688 0.015134718 DRCPLPCIPTLIGT(ph)PVK ddPTM_A459_MK2206_30min_R1 1 DRCPLPCIPTLIGTPVK 17 1 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 DRCPLPCIPTLIGT(1)PVK 132.6 0.00096131 34362000 3546 4520.3 3107.6 2965.2 3201.6 2816.6 3647.5 2770.6 3844.7 2885.1 TRUE FALSE 3244.394079 4226.027648 2896.66477 3193.580218 3074.073493 2976.073458 3404.18193 2746.376936 4244.370323 3242.527969 1.000575511 1.303312628 0.893335323 0.984904447 0.948048412 0.917825069 1.0498543 0.846986352 1.308969533 1 11.6629033 -5.274346481 24.99432992 0.985621034 1.151944088 0.173343916 0.137279482 1032.061934 1998566.552 0.033408863 0.070279342 5.32E-06 5.274346481 0.166323054 DRCPLPCIPTLIGT(ph)PVK ddPTM_A459_MK2206_30min_R2 1 DRCPLPCIPTLIGTPVK 17 1 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 DRCPLPCIPTLIGT(1)PVK 93.255 0.010294 48639000 137980 114310 138920 147410 119870 120380 162120 98778 109040 163720 TRUE FALSE 148543.8549 108633.5316 143551.5235 135366.1315 115163.3015 124961.1453 140833.4493 111688.6238 118524.1021 158377.8298 0.937908134 0.685913753 0.906386479 0.85470379 0.727142818 0.789006551 0.889224517 0.705203651 0.748362964 1 17.27301087 -4.70533625 23.57662649 0.805921941 0.937914571 0.132883527 0.095618964 26255.13479 11030964.54 0.022577787 39.92597404 1.97E-05 4.70533625 0.13199263 DRCSWQDLSS(ph)K ddPTM_A459_MK2206_30min_R2 1 DRCSWQDLSSK 11 1 Q8WU68-2 Q8WU68-2 1 DRCSWQDLS(0.04)S(0.96)K 106.67 0.044812 0 11475 10457 11409 12862 12378 11272 13583 8507.4 7814.1 12898 TRUE FALSE 12353.53482 9937.720586 11789.37037 11811.13346 11891.97753 11700.96386 11799.53578 9619.34639 8493.756293 12477.13932 0.990093523 0.796474283 0.944877673 0.94662191 0.953101286 0.937792194 0.945692397 0.770957681 0.680745488 1 13.60699958 -7.759995865 24.99953246 0.794388667 0.927801053 0.244268185 0.08864127 43.94389351 761091.8599 0.042254002 0.022692832 1.74E-08 7.759995865 0.133412386 DRDDRDFDFCR ddPTM_A459_MK2206_30min_R2 2 DRDDRDFDFCR 11 2 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 0 ; 92.239 0.016039 25188300 52328 69166 67307 66466 71967 69198 64944 41017.1 67169 66412 FALSE TRUE 56334.27191 65731.31702 69550.98179 61035.51519 69141.21397 71831.37838 56416.77479 46378.1758 73011.23821 64244.98188 0.876866492 1.023135428 1.082590107 0.950043309 1.076211899 1.118085433 0.878150684 0.721895694 1.136450444 1 15.97129615 -7.283192081 24.7842486 0.91094884 1.023308134 0.104108579 0.117348507 1332.547699 1518250.178 0.04810929 0.032464166 5.21E-08 7.283192081 0.112359293 DRDVQDETYR ddPTM_A459_MK2206_30min_R2 1 DRDVQDETYR 10 1 F5H1S9;Q9Y606-2;Q9Y606;F5GXL3;G8JLB3 F5H1S9 PUS1 "tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial" 0 121.36 0.013529 4183700 12257 16830 15446 17508 18655 16632 17049 16033 18411 18159 FALSE TRUE 13195.40534 15994.24667 15960.96193 16077.54039 17922.51097 17264.94241 14810.44582 18128.56815 20012.3555 17566.47332 0.751169862 0.910498447 0.908603659 0.915240077 1.020268021 0.982834864 0.843108662 1.03199816 1.139235812 1 14.10053696 -2.934288694 0.34360912 1.023807417 6.74E-12 0.532847768 0.07053165 21.01595987 0.719621231 0.066582692 11.55314545 0.001163352 2.934288694 -1.023807417 DRDYFDYSR ddPTM_A459_MK2206_30min_R1 2 DRDYFDYSR 9 1 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 0 ; 112.3 0.02755 17115100 6000.6 5225.2 6190 4832.3 9162.3 10733.7 10375.9 9076.5 5153.6 5152.8 FALSE TRUE 5490.21746 4885.03853 5769.840046 5204.484583 8797.34619 11341.43282 9683.742643 8997.145117 5689.335162 5791.167766 0.948032881 0.843532553 0.996317199 0.898693458 1.519097105 1.958401704 1.67215716 1.553597734 0.982415878 1 12.49963858 -6.262374332 24.63191632 1.512058288 0.921398408 0.449610465 0.279688179 58.92042954 1552296.505 0.086974753 0.10445056 5.47E-07 6.262374332 -0.59065988 DRDYSDHPSGGSYR ddPTM_A459_MK2206_30min_R1 4 DRDYSDHPSGGSYR 14 1 H3BT71;H0Y6E7;P38159;P38159-2;H3BUY5;Q96E39 H3BT71;P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 0 ;;; 83.087 0.022707 70683000 20945.1 12407.9 15570.4 11495.9 26449.8 23225.1 22139.6 19135.5 11849.3 8900.2 FALSE TRUE 19163.60926 11600.14345 14513.52463 12381.31621 25396.24846 24540.08509 20662.70768 18968.20034 13081.07714 10002.82397 1.915819904 1.159686853 1.450942721 1.237782075 2.538907866 2.4533157 2.065687424 1.896284529 1.307738413 1 13.28811973 -6.228842278 24.95374479 1.960054688 1.421665979 0.152945571 0.478363445 1003.452292 768162.9809 0.142105271 0.183443571 5.90E-07 6.228842278 -0.538388709 DRDYSDHPSGGSYR ddPTM_A459_MK2206_30min_R2 2 DRDYSDHPSGGSYR 14 1 H3BT71;H0Y6E7;P38159;P38159-2;H3BUY5;Q96E39 H3BT71;P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 0 ; 86.262 0.018759 32775410 17527.5 116991.7 50531.5 195017.8 204155.8 335636 172821.4 107355.9 187992.9 49410.77 FALSE TRUE 18869.41888 111182.0623 52216.19499 179084.2219 196139.6175 348408.8632 150129.7426 121387.6847 204344.1826 47798.50062 0.3947701 2.32605753 1.092423283 3.746649363 4.103467995 7.289116994 3.140888116 2.539570973 4.275117001 1 15.54467774 -5.784795099 7.667017284 3.937089569 1.374466679 0.334329963 1.56745372 0.195125144 47.54408681 0.446206586 0.682976655 1.64E-06 5.784795099 -2.56262289 DREDYVPYTGEK ddPTM_A459_MK2206_30min_R2 2 DREDYVPYTGEK 12 1 Q9NYL9 Q9NYL9 TMOD3 Tropomodulin-3 0 ; 135.94 0.0040822 10388800 82920 85935 88217 92827 81961 68103 89997 71233 64701 94501 FALSE TRUE 89268.41895 81667.59286 91158.11075 85242.73716 78742.79932 70694.70739 78180.28579 80543.39768 70328.57603 91417.44011 0.976492219 0.893348061 0.99716324 0.932455963 0.861354236 0.773317513 0.855200996 0.881050679 0.769312463 1 16.4801818 -6.250252979 3.935344258 0.845564527 0.951021379 0.325484427 0.065194483 0.236752224 8.529726814 0.019168237 0.023828953 5.62E-07 6.250252979 0.105456851 DREEALHQFR ddPTM_A459_MK2206_30min_R1 1 DREEALHQFR 10 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;F6S8Q4;A0A0D9SFB3;A0A2R8Y7T2;O15523;O15523-2;A0A087WVZ1;A0A2R8YDH3;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 0 78.556 0.041603 7869600 2879.2 3215.3 3286 3164.1 3251.2 2833.6 2830 3063.9 2511.3 2515.8 FALSE TRUE 2634.308921 3005.983386 3062.955475 3407.79953 3121.697819 2994.035983 2641.215864 3037.112645 2772.358622 2827.476297 0.931682053 1.06313301 1.083282459 1.205244243 1.104057998 1.058907545 0.934124847 1.074142566 0.980506406 1 11.46529921 -7.015700975 22.6323058 1.002392576 1.083841247 0.2255515 0.070015885 328.2145572 473107.0651 0.027485302 0.022016815 9.64E-08 7.015700975 0.081448671 DREEALHQFR ddPTM_A459_MK2206_30min_R2 5 DREEALHQFR 10 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;F6S8Q4;A0A0D9SFB3;A0A2R8Y7T2;O15523;O15523-2;A0A087WVZ1;A0A2R8YDH3;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 0 ;;;; 111.06 0.007231 159389500 83998.5 114106.8 104851.4 115228.6 117070.6 99233.3 116748.8 104656 94357.4 109747.5 FALSE TRUE 90429.48974 108440.4222 108347.0933 105814.0548 112473.82 103009.6928 101419.5423 118334.8985 102564.4361 106166.4481 0.851770888 1.021418953 1.020539872 0.996680747 1.059410219 0.97026598 0.95528808 1.114616724 0.966072031 1 16.69596838 -4.759719989 24.99415326 1.013427491 0.851770686 0.529309628 0.045182432 33.91207232 492821.9942 0.01079324 0.067249149 1.74E-05 4.759719989 -0.161656805 DREEDEEDAYER ddPTM_A459_MK2206_30min_R1 1 DREEDEEDAYER 12 1 P49756 P49756 RBM25 RNA-binding protein 25 0 174.05 0.00044749 21330000 4078.6 4300.5 3945.9 3326.2 3789.5 3537.1 4415.2 3698 3749.1 3590.8 FALSE TRUE 3731.693652 4020.536668 3678.063302 3582.3845 3638.556191 3737.367545 4120.670064 3665.668776 4138.832361 4035.655413 0.924680943 0.996253708 0.911391813 0.887683445 0.901602297 0.926086884 1.021065885 0.908320558 1.025566342 1 11.97858728 -7.183264318 10.59740743 0.981074053 0.92448627 0.36957617 0.040536932 0.804231456 106.3064025 0.015702214 0.012161146 6.56E-08 7.183264318 -0.056587782 DREEDEEDAYER ddPTM_A459_MK2206_30min_R2 1 DREEDEEDAYER 12 1 P49756 P49756 RBM25 RNA-binding protein 25 0 145.81 0.0018972 12149000 6365.9 7999.9 8305.3 13505 9193.9 6469.5 9007.5 9216.5 7841.6 7494.1 FALSE TRUE 6853.278199 7602.636599 8582.194557 12401.5983 8832.90129 6715.701356 7824.80443 10421.12819 8523.648194 7249.568131 0.945336063 1.048702 1.183821491 1.710667184 1.218403791 0.926358817 1.079347664 1.437482621 1.17574565 1 12.82367934 -5.193031683 3.456213308 1.23533131 0.97412921 0.14953101 0.211914259 0.461790183 10.73965817 0.059237628 0.184063055 6.41E-06 5.193031683 -0.2612021 DREEDEEDAYERR ddPTM_A459_MK2206_30min_R1 2 DREEDEEDAYERR 13 2 P49756 P49756 RBM25 RNA-binding protein 25 0 ; 94.82 0.0098308 12160300 2456.9 2899.7 2651.5 2247.6 2591.1 2553.2 2141 2476.8 1749.38 1702.2 FALSE TRUE 2247.927753 2710.929003 2471.523568 2420.710541 2487.891 2697.759978 1998.177796 2455.145599 1931.234311 1913.081387 1.175029859 1.417048444 1.291907174 1.265346345 1.300462708 1.410164772 1.044481333 1.283346132 1.009488841 1 10.90168254 -8.00936596 0.91189677 0.994598233 1.307889112 0.525318839 0.1017832 0.424081462 0.67421847 0.089370822 0.034342457 9.79E-09 8.00936596 0.31329088 DREEDEEDAYERR ddPTM_A459_MK2206_30min_R2 2 DREEDEEDAYERR 13 2 P49756 P49756 RBM25 RNA-binding protein 25 0 ; 99.5 0.0074157 21614400 36082 59742 46391 54013 55414 49026 49845 43590 56394 47935 FALSE TRUE 38844.46566 56775.29915 47937.65279 49599.96512 53238.16793 50891.71878 43300.29163 49287.36267 61299.04818 46370.88488 0.837690843 1.224373857 1.033787751 1.069635942 1.148094717 1.09749294 0.933781871 1.06289459 1.321929662 1 15.50093164 -4.741951349 24.84986621 1.094426921 0.837689903 0.354690095 0.105613743 1478.426702 1885087.796 0.02587729 0.961696885 1.81E-05 4.741951349 -0.256737018 DRELWVQR ddPTM_A459_MK2206_30min_R2 1 DRELWVQR 8 1 Q9Y3C8 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 0 98.458 0.023774 0 12910 20173 15942 19954 18463 16742 23305 18607 17544 21883 FALSE TRUE 13898.39953 19171.23815 16473.49832 18323.69437 17738.04985 17379.12854 20245.02551 21038.99879 19069.94541 21168.9595 0.656546181 0.905629686 0.778191215 0.865592585 0.837927336 0.820972261 0.956354303 0.993860789 0.900844721 1 14.36966274 -1.769457095 0.150758035 1.03790998 8.79E-11 0.599291391 0.063091443 45.66130003 0.483630302 0.222953052 10.2275113 0.017003679 1.769457095 -1.03790998 DRENYDR ddPTM_A459_MK2206_30min_R2 1 DRENYDR 7 1 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 108.09 0.046267 13212000 15384 7009.4 7615.7 9011 13922 9257.4 13202 51672 32527 14176 FALSE TRUE 16561.81087 6661.323389 7869.603637 8274.772475 13375.35233 9609.696844 11468.56154 58425.70782 35356.13966 13713.43828 1.207706669 0.485751513 0.573860725 0.603406112 0.975346376 0.700750362 0.836300956 4.260471125 2.578211163 1 13.74330271 -7.67397171 9.920483846 2.811272165 0.744509309 0.546563362 0.763232111 0.20513507 21.42265698 0.33591496 0.193542667 2.12E-08 7.67397171 -2.066762856 DREPHGYS(ph)PER ddPTM_A459_MK2206_30min_R1 2 DREPHGYSPER 11 1 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 DREPHGYS(1)PER;DREPHGYS(1)PER 110.25 0.015274 8312000 3056.27 3274.9 3096.2 2862.93 3321.9 2857.17 3514.4 2986.02 2425.54 2552.05 TRUE FALSE 2796.318187 3061.703415 2886.038571 3083.433365 3189.581689 3018.940496 3279.960788 2959.913542 2677.683563 2868.217221 0.974932501 1.067458696 1.006213389 1.075034813 1.112043281 1.052549463 1.14355383 1.031969797 0.933570701 1 11.48593857 -8.040896462 7.720461882 0.971332249 1.063688876 0.384440992 0.047347577 0.293860201 48.56112599 0.031603416 0.012174511 9.10E-09 8.040896462 0.092356627 DREPYFDR ddPTM_A459_MK2206_30min_R1 2 DREPYFDR 8 1 H0YIQ2;P49750-3;P49750-1;P49750;F8VU51;H0YI23 H0YIQ2 YLPM1 YLP motif-containing protein 1 0 ; 160.63 0.0012148 18328100 6248.5 5025.3 5469.2 5702.9 5808.8 5713.9 5635.3 5016.5 4496.2 3942.6 FALSE TRUE 5717.032263 4698.152057 5097.965942 6142.138346 5577.423196 6037.41608 5259.379419 4972.641269 4963.59608 4431.039053 1.290223849 1.06028225 1.150512528 1.386162088 1.258716777 1.362528294 1.186940435 1.122229168 1.120187843 1 12.11342933 -8.152627588 1.307864512 1.020361041 1.243743271 0.419037536 0.092359966 0.467633746 1.489750876 0.092719537 0.030066791 7.04E-09 8.152627588 0.223382229 DRFS(ph)AEDEALSNIAR ddPTM_A459_MK2206_30min_R1 2 DRFSAEDEALSNIAR 15 1 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5;C9JJC9;C9JC17;C9J321;C9J0U5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 DRFS(1)AEDEALSNIAR;DRFS(1)AEDEALSNIAR 145.17 0.00020242 8162900 1378.58 1339.13 1224.04 1175.51 1982.33 1593.34 1352.14 1469.36 1209.16 1330.61 TRUE FALSE 1261.324532 1251.952394 1140.955575 1266.047984 1903.369598 1683.553534 1261.941208 1456.51354 1334.856509 1495.456012 0.843438069 0.837170992 0.762948268 0.846596606 1.272768696 1.125779374 0.843850436 0.973959467 0.89260834 1 10.54636976 -6.029377676 24.8717422 1.017720631 0.814782251 0.418192958 0.113511396 684.3717709 579402.2352 0.036290733 0.046936441 9.35E-07 6.029377676 -0.20293838 DRFS(ph)AEDEALSNIAR ddPTM_A459_MK2206_30min_R2 3 DRFSAEDEALSNIAR 15 1 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5;C9JJC9;C9JC17;C9J321;C9J0U5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 DRFS(1)AEDEALSNIAR;DRFS(1)AEDEALSNIAR;DRFS(1)AEDEALSNIAR 125.59 0.00066866 4365700 14822.5 18847.6 15662.3 22339 21190.5 17158.5 20392.9 14596.7 17050.8 17749.5 TRUE FALSE 15957.322 17911.65559 16184.47326 20513.83224 20358.4545 17811.47874 17715.28773 16504.53881 18533.84776 17170.33527 0.92935413 1.043174481 0.942583416 1.1947252 1.185676003 1.037340184 1.031738021 0.961224027 1.079410942 1 14.06763059 -4.723249568 1.348023449 1.062935755 0.873667807 0.182894563 0.078977278 2.804610223 4.123554911 0.024978169 0.758431968 1.89E-05 4.723249568 -0.189267948 DRHDDYYR ddPTM_A459_MK2206_30min_R1 1 DRHDDYYR 8 1 F8WJN3;Q16630-3;Q16630;Q16630-2 F8WJN3 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 0 120.87 0.020217 4039700 391.06 446.33 723.69 401.91 699.27 440.53 685.6 685.94 99.494 299.59 FALSE TRUE 357.7982935 417.2738359 674.5679391 432.8651778 671.4165952 465.4724279 639.8648749 679.9428989 109.8367573 336.705471 1.062644727 1.239284395 2.003436229 1.285589974 1.99407688 1.38243203 1.9003697 2.019399616 0.326210195 1 8.395343353 -8.263885397 24.99887773 0.663105057 1.615562999 0.510967187 0.370870662 175.2592183 1791131.62 0.301769366 0.092078312 5.45E-09 8.263885397 0.952457942 DRICS(ph)DEEEDEEK ddPTM_A459_MK2206_30min_R2 1 DRICSDEEEDEEK 13 1 Q9NPG3;Q9NPG3-2 Q9NPG3 UBN1 Ubinuclein-1 1 DRICS(1)DEEEDEEK 123.63 0.0013291 6828400 35712 26223 31556 26667 22399 22018 38569 28419 21320 34627 TRUE FALSE 38446.13818 24920.80395 32608.06129 24488.2208 21519.50271 22855.91042 33504.84397 32133.46088 23174.37506 33497.12383 1.147744456 0.74396847 0.973458541 0.731054431 0.642428372 0.682324564 1.000230472 0.959290148 0.691831788 1 15.03174961 -4.753108942 24.92935668 0.820704589 1.147745086 0.331964541 0.137252094 374.14153 1119552.485 0.035158217 0.39126166 1.77E-05 4.753108942 0.327040497 DRLGS(ph)PLAVDEALR ddPTM_A459_MK2206_30min_R2 1 DRLGSPLAVDEALR 14 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 DRLGS(1)PLAVDEALR 69.422 0.033299 1568900 3609.9 3679.8 5011.3 4230.8 3749.4 4447.6 4436.1 3224.5 4105.2 4552.4 TRUE FALSE 3886.27672 3497.066483 5178.374241 3885.130106 3602.179717 4616.856535 3853.634741 3645.953221 4462.262875 4403.855561 0.882471431 0.794092003 1.175872862 0.882211065 0.817960459 1.04836693 0.875059295 0.827900273 1.013262768 1 12.10455144 -8.316280209 24.83613687 1.006631654 0.916845434 0.102830574 0.110166306 824.6987459 373478.665 0.105484438 0.027236016 4.83E-09 8.316280209 -0.08978622 DRLGS(ph)YSGPTSVSR ddPTM_A459_MK2206_30min_R1 3 DRLGSYSGPTSVSR 14 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 "Pantothenate kinase 2, mitochondrial" 1 DRLGS(0.993)YS(0.007)GPTSVSR;DRLGS(0.992)YS(0.008)GPTSVSR;DRLGS(0.914)YS(0.086)GPTSVSR 218.34 5.04E-08 96060000 8027.7 7849.1 7346.7 6455.8 8991.2 6206 7073.7 7908.7 6031.9 5069.8 TRUE FALSE 7344.90196 7338.122163 6848.026473 6953.026835 8633.061465 6557.378357 6601.82638 7839.55507 6658.93759 5697.885099 1.289057577 1.287867698 1.201854083 1.220282037 1.515134355 1.150844259 1.158645052 1.375871035 1.168668282 1 12.47621081 -8.534080987 19.3035792 0.999999996 1.271182437 0.406187208 0.102768366 66.50675252 114606.0105 0.098897563 0.025535241 2.92E-09 8.534080987 0.271182441 DRNGIGPGSHSEFAASIGS(ph)PK ddPTM_A459_MK2206_30min_R2 1 DRNGIGPGSHSEFAASIGSPK 21 1 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 DRNGIGPGS(0.003)HS(0.001)EFAAS(0.074)IGS(0.923)PK 62.532 0.0081627 7480300 11927 12766 13885 15758 15740 11281 18862 12693 12146 17583 TRUE FALSE 12840.14029 12132.059 14347.91897 14470.52099 15121.96851 11710.30636 16385.39674 14352.01868 13202.43713 17009.26815 0.754890815 0.71326167 0.84353535 0.850743304 0.889042866 0.688466209 0.963321678 0.843776379 0.776190781 1 14.05403345 -14.52287875 0.076707649 1.551716407 0.63713215 0.364851628 0.076900232 312.3871279 1.700034429 30.24232923 3.086141053 3.00E-15 14.52287875 -0.914584257 DRNVIPDT(ph)PPSTPLVPSR ddPTM_A459_MK2206_30min_R1 1 DRNVIPDTPPSTPLVPSR 18 1 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 DRNVIPDT(0.964)PPS(0.031)T(0.004)PLVPSR 65.677 0.045556 9579300 2636.3 2893.6 3223.9 2299.3 2867 2804.4 2700 2491.3 2354.8 2405.5 TRUE FALSE 2412.068841 2705.226114 3005.07065 2476.392484 2752.801319 2963.182704 2519.887926 2469.518827 2599.589887 2703.511501 0.892198476 1.000634217 1.111543505 0.915991104 1.018231777 1.096049602 0.932079603 0.913448612 0.961560506 1 11.40061878 DRPFFAGLVK ddPTM_A459_MK2206_30min_R1 2 DRPFFAGLVK 10 1 Q32Q12;P22392-2;J3KPD9;E7ERL0;E5RHP0;P15531;P15531-2 Q32Q12;P15531 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ; 115.23 0.018912 29643000 8889.6 9038.7 9700.3 8961.7 8105.3 7628.8 8665.4 7681.8 6529.4 6463.4 FALSE TRUE 8133.492839 8450.278987 9041.870663 9651.931687 7782.448738 8060.736063 8087.346977 7614.638832 7208.154496 7264.134788 1.119678128 1.163287746 1.24472782 1.328710434 1.071352469 1.109662238 1.113325566 1.048251313 0.992293605 1 12.82657526 -7.288505026 0.859179939 0.999899443 1.20272592 0.582349286 0.064418188 0.480160837 0.686462453 0.055510047 0.032056787 5.15E-08 7.288505026 0.202826477 DRPFFAGLVK ddPTM_A459_MK2206_30min_R2 1 DRPFFAGLVK 10 1 Q32Q12;P22392-2;J3KPD9;E7ERL0;E5RHP0;P15531;P15531-2 Q32Q12;P15531 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 153.1 0.0017143 3620600 18625 18885 17362 20135 20950 19432 19249 17068 16260 17916 FALSE TRUE 20050.94432 17947.19836 17940.84041 18489.90609 20127.39773 20171.49838 16721.58318 19298.8462 17674.26541 17331.40239 1.15691413 1.035530649 1.035163803 1.066844199 1.161325396 1.163869947 0.964814203 1.11351902 1.019782763 1 14.08110078 -8.293744831 0.939935297 1.000937659 1.090141868 0.198729831 0.061670836 1.001708224 1.876233391 0.060194093 0.021298601 5.08E-09 8.293744831 0.089204209 DRPFFPGLVK ddPTM_A459_MK2206_30min_R1 1 DRPFFPGLVK 10 1 Q32Q12;P22392-2;J3KPD9;P22392;F6XY72;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 0 105.98 0.034332 19978000 5935.2 5923 7022.3 5707.7 4934.6 4062.6 4777.9 4763.1 4109.6 3754.4 FALSE TRUE 5430.380073 5537.411623 6545.645841 6147.308043 4738.044433 4292.620901 4459.175009 4721.456719 4536.807626 4219.523416 1.286965265 1.312331057 1.551276103 1.456872598 1.122886157 1.017323635 1.056795891 1.118954975 1.075194324 1 12.04286434 -6.344140243 4.694121763 1.063062749 1.405798008 0.827422468 0.075640219 0.096464539 3.792036354 0.025949745 0.029747845 4.53E-07 6.344140243 0.342735259 DRPFFPGLVK ddPTM_A459_MK2206_30min_R2 2 DRPFFPGLVK 10 1 Q32Q12;P22392-2;J3KPD9;P22392;F6XY72;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 0 ; 123.86 0.01133 17232400 90416 98582 99911 104031 92330 87166 95553 64774 78934 82080 FALSE TRUE 97338.31848 93686.56123 103241.9829 95531.33452 88704.66028 90483.16321 83006.77632 73240.1842 85799.53664 79401.73632 1.225896599 1.179905699 1.300248429 1.203139112 1.117162727 1.139561518 1.045402534 0.922400285 1.080575068 1 16.27688294 -6.882497141 1.0890606 0.997254174 1.230475088 0.769873262 0.051474906 0.229671991 0.572320037 0.029626802 0.023782539 1.31E-07 6.882497141 0.233220914 DRPGDEDWVHR ddPTM_A459_MK2206_30min_R1 1 DRPGDEDWVHR 11 1 O60826 O60826 CCDC22 Coiled-coil domain-containing protein 22 0 99.539 0.013664 6357300 4359.5 3636.4 3935 3301.1 4009.4 3823.5 4225.5 3805.6 3570.9 3270.7 FALSE TRUE 3988.701632 3399.669699 3667.903164 3555.351294 3849.697108 4039.983266 3943.624605 3772.32804 3942.107834 3675.899009 1.085095543 0.924853945 0.997824792 0.967205923 1.047280434 1.099046317 1.072832685 1.026232775 1.07242006 1 11.84388142 -6.358475493 5.721194186 1.058398661 0.989327265 0.287388166 0.045207024 0.256960664 12.31404251 0.013555846 0.015409782 4.38E-07 6.358475493 -0.069071396 DRPGDEDWVHR ddPTM_A459_MK2206_30min_R2 4 DRPGDEDWVHR 11 1 O60826 O60826 CCDC22 Coiled-coil domain-containing protein 22 0 ;;; 91.469 0.021005 23032400 105490 128687 108479 116147 128489 117115 125948 105172 113173 109072 FALSE TRUE 113566.3955 122296.5907 112095.6357 106657.4186 123443.8763 121571.8934 109410.8763 118918.3415 123016.583 105512.9896 1.076326204 1.159066682 1.062387069 1.010846333 1.169940088 1.152198359 1.036942245 1.127049304 1.165890413 1 16.68706109 -5.275380085 24.43657811 1.095454924 1.117696456 0.024688585 0.06240007 2843.748995 4984797.621 0.016479573 0.034548545 5.30E-06 5.275380085 0.022241532 DRPGS(ph)PESPLLDAPFSR ddPTM_A459_MK2206_30min_R1 3 DRPGSPESPLLDAPFSR 17 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 DRPGS(0.979)PES(0.021)PLLDAPFSR;DRPGS(0.988)PES(0.012)PLLDAPFSR;DRPGS(0.995)PES(0.005)PLLDAPFSR 68.401 0.020157 29102500 3201.5 3760.5 3799.89 3220.76 4244.3 3318.33 4223.5 3832.7 3631.2 3404.48 TRUE FALSE 2929.195613 3515.690766 3541.964054 3468.823493 4075.240544 3506.210977 3941.758021 3799.191108 4008.676234 3826.252685 0.765552057 0.918833923 0.925700508 0.906585053 1.065073553 0.916356358 1.030187587 0.992927394 1.047676817 1 11.90171644 -3.390824848 0.495089662 1.01157524 2.85E-15 0.700129861 0.046362514 9.023475482 0.578738565 0.025552675 7.163911508 0.000406607 3.390824848 -1.01157524 DRPGS(ph)PESPLLDAPFSR ddPTM_A459_MK2206_30min_R2 1 DRPGSPESPLLDAPFSR 17 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 DRPGS(0.93)PES(0.07)PLLDAPFSR 88.768 0.0054436 8391800 10465 10476 8936.4 11488 9523.7 11455 12906 9869.7 9771.1 14214 TRUE FALSE 11266.20845 9955.777074 9234.335116 10549.39365 9149.751685 11890.92805 11211.4267 11159.70368 10620.97262 13750.19834 0.819348795 0.72404607 0.671578321 0.767217562 0.665426887 0.864782293 0.815364725 0.811603106 0.77242323 1 13.74716481 -6.773403112 24.9613416 0.838718008 0.728094155 0.428476033 0.070258454 232.4321335 484947.419 0.023646305 0.021012721 1.68E-07 6.773403112 -0.110623853 DRPVGGS(ph)PGGPR ddPTM_A459_MK2206_30min_R1 2 DRPVGGSPGGPR 12 1 Q8NHG8 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 1 DRPVGGS(1)PGGPR;DRPVGGS(1)PGGPR 80.102 0.022428 83516000 2194.07 2405.85 2263.64 1700.8 2780.3 2893.2 2805.1 2898 2260.3 2005.91 TRUE FALSE 2007.452825 2249.228728 2109.990424 1831.795911 2669.554764 3057.010484 2617.976897 2872.663092 2495.266274 2254.417275 0.890453089 0.997698498 0.935936061 0.812536318 1.184144033 1.356009164 1.161265453 1.274237526 1.106834259 1 11.13853886 -6.299854158 10.57983254 1.202093278 0.917437793 0.635970982 0.099656237 0.461404901 125.8911309 0.029870367 0.033972092 5.01E-07 6.299854158 -0.284655485 DRPVS(ph)QPSLVGSK ddPTM_A459_MK2206_30min_R1 2 DRPVSQPSLVGSK 13 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 DRPVS(1)QPSLVGSK;DRPVS(0.999)QPS(0.001)LVGSK 111.58 0.0028621 27972000 7292.5 7873.8 8633.5 6187 7270.6 6217.8 8227.9 7927.6 8634.2 10610.3 TRUE FALSE 6672.234581 7361.214189 8047.482074 6663.523812 6980.996606 6569.846463 7679.031804 7858.289829 9531.755988 11924.78407 0.559526658 0.617303772 0.674853484 0.558796182 0.585419121 0.550940497 0.643955627 0.658988019 0.799323152 1 13.54167552 -8.511441669 1.263653172 0.999676003 0.595594533 0.926527447 0.03584382 0.119726096 0.4197044 0.035518592 0.01095765 3.08E-09 8.511441669 -0.40408147 DRPVS(ph)QPSLVGSK ddPTM_A459_MK2206_30min_R2 3 DRPVSQPSLVGSK 13 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 DRPVS(1)QPSLVGSK;DRPVS(1)QPSLVGSK;DRPVS(1)QPSLVGSK 128.1 0.0010229 96298000 356963 354106 361068 396618 396842 328964 405338 300663 349332 484625 TRUE FALSE 384292.3617 336521.611 373105.8269 364213.0407 381259.9891 341482.9555 352116.6337 339960.6864 379716.2659 468811.7259 0.819715763 0.717818246 0.795854298 0.776885518 0.813247553 0.728401055 0.751083248 0.725153975 0.809954711 1 18.83864913 -8.611697956 7.120373439 0.999999588 0.76566674 0.806357978 0.034286134 0.925896182 74.22941393 0.032287592 0.008352356 2.45E-09 8.611697956 -0.234332848 DRPVSQPSLVGS(ph)KEEPPPAR ddPTM_A459_MK2206_30min_R1 1 DRPVSQPSLVGSKEEPPPAR 20 2 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 DRPVS(0.001)QPS(0.001)LVGS(0.998)KEEPPPAR 65.905 0.018434 8437900 1156.7 1957.1 1745.2 1519.3 1264.8 869.65 1333 1468.3 1686.6 1708.8 TRUE FALSE 1058.316591 1829.692434 1626.740686 1636.316749 1214.420338 918.8888315 1244.078002 1455.462808 1861.928106 1920.499045 0.551063326 0.95271718 0.847040612 0.852026849 0.632346234 0.478463571 0.64778892 0.757856564 0.969502229 1 10.90726553 -8.24822 3.634017387 0.997709127 0.716399654 0.387504252 0.136834791 0.268311401 7.370778516 0.13126666 0.039093091 5.65E-09 8.24822 -0.281309472 DRPVSQPSLVGS(ph)KEEPPPAR ddPTM_A459_MK2206_30min_R2 1 DRPVSQPSLVGSKEEPPPAR 20 2 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 DRPVS(0.002)QPS(0.006)LVGS(0.993)KEEPPPAR 56.131 0.048023 12011000 23915 23834 21201 21266 18959 14864 24630 16114 12524 25008 TRUE FALSE 25745.95079 22650.43822 21907.83076 19528.49977 18214.5744 15429.65994 21396.05141 18220.15513 13613.31488 24191.99101 1.064234472 0.936278383 0.905581965 0.807229953 0.752917542 0.637800334 0.884427057 0.753148227 0.562719905 1 14.56224189 -5.321895299 1.073913475 0.751840174 1.076193403 0.410766823 0.115009075 0.805084801 1.345528649 0.038342897 0.24278227 4.77E-06 5.321895299 0.32435323 DRRPVHLDQAAFR ddPTM_A459_MK2206_30min_R1 2 DRRPVHLDQAAFR 13 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 0 ; 106.26 0.0044529 19214600 5788 6824.4 6500.4 6165.7 7106.9 6561.4 6215.7 6253.2 5410.9 4839.4 FALSE TRUE 5295.700206 6380.13032 6059.170959 6640.583282 6823.817124 6932.900798 5801.061994 6198.528932 5973.382418 5438.941408 0.973663772 1.173046341 1.114034976 1.220933043 1.25462229 1.274678339 1.06657924 1.139657236 1.098261954 1 12.40911017 -8.563328448 1.063553831 1.002313982 1.164757258 0.237722736 0.084323481 0.87185602 2.14975456 0.083810827 0.027171569 2.73E-09 8.563328448 0.162443276 DRS(ph)FSENGDR ddPTM_A459_MK2206_30min_R1 2 DRSFSENGDR 10 1 P47974 P47974 ZFP36L2 "Zinc finger protein 36, C3H1 type-like 2" 1 DRS(0.918)FS(0.082)ENGDR;DRS(0.92)FS(0.08)ENGDR 179.59 0.0003567 27287000 8095.4 8119.5 8266 6720 8673.8 5747.8 7329.3 7107.9 5494.2 5026.8 TRUE FALSE 7406.843719 7590.919074 7704.92695 7237.575564 8328.304179 6073.235469 6840.37577 7045.75638 6065.341751 5649.557934 1.31104837 1.343630628 1.363810592 1.28108706 1.474151478 1.074993042 1.210780711 1.247134105 1.073595814 1 12.46392227 -7.856409098 0.482060789 0.997792575 1.360395067 0.60599029 0.088995325 0.633040202 0.36035123 0.094189279 0.063847365 1.39E-08 7.856409098 0.362602493 DRS(ph)SPPPGYIPDELHQVAR ddPTM_A459_MK2206_30min_R1 4 DRSSPPPGYIPDELHQVAR 19 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 DRS(0.499)S(0.499)PPPGY(0.001)IPDELHQVAR;DRS(0.5)S(0.5)PPPGYIPDELHQVAR;DRS(0.5)S(0.5)PPPGY(0.001)IPDELHQVAR;DRS(0.5)S(0.5)PPPGYIPDELHQVAR 165.16 2.16E-08 143588000 12199.5 12139.8 11575 10013.2 12705 12550.9 13130.1 12073.4 9626.7 9769.1 TRUE FALSE 11161.86846 11349.49681 10789.32125 10784.4184 12198.93295 13261.52111 12254.21499 11967.84354 10627.42991 10979.36986 1.016621956 1.033711129 0.98269039 0.982243839 1.111077694 1.207858127 1.116112777 1.090030092 0.967945342 1 13.42250764 -6.263670995 24.94973041 1.094653656 1.004443103 0.253870571 0.063680543 253.1308 2830023.047 0.020442503 0.024292255 5.45E-07 6.263670995 -0.090210553 DRS(ph)SPPPGYIPDELHQVAR ddPTM_A459_MK2206_30min_R2 5 DRSSPPPGYIPDELHQVAR 19 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 DRS(0.5)S(0.5)PPPGYIPDELHQVAR;DRS(0.491)S(0.491)PPPGY(0.019)IPDELHQVAR;DRS(0.5)S(0.5)PPPGY(0.001)IPDELHQVAR;DRS(0.494)S(0.494)PPPGY(0.012)IPDELHQVAR;DRS(0.481)S(0.481)PPPGY(0.038)IPDELHQVAR 154.31 3.31E-06 216892500 103759 125971.9 127934 143141 128015 129666 139859 110958.7 132151 124852 TRUE FALSE 111702.8688 119716.3186 132199.2557 131445.9224 122988.4879 134600.5305 121495.3453 125461.3831 143645.2551 120778.0895 0.924860373 0.991208912 1.09456323 1.088325896 1.01830132 1.114444939 1.005938625 1.03877602 1.18933207 1 16.88199923 -5.010720789 3.222230908 1.068145394 0.928322068 0.41777285 0.054807462 0.236469703 4.828510393 0.01373201 0.062839102 9.76E-06 5.010720789 -0.139823326 DRS(ph)SSAPNVHINTIEPVNIDDLIR ddPTM_A459_MK2206_30min_R1 2 DRSSSAPNVHINTIEPVNIDDLIR 24 1 H7C560;A0A2R8Y8E0;A0A2U3TZI2;P15056;A0A2R8Y679;A0A2R8Y492;A0A2R8YDP5 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;DRS(0.333)S(0.333)S(0.333)APNVHINT(0.001)IEPVNIDDLIR 88.768 3.07E-05 6030800 1771.94 1542.41 1715.75 1563.16 2002.48 2166.25 2380.69 2559.68 1646.21 1415 TRUE FALSE 1621.227198 1441.998829 1599.28967 1683.554854 1922.716981 2288.901203 2221.878514 2537.300988 1817.339421 1590.300883 1.019446833 0.906745915 1.005652256 1.0586392 1.209027174 1.439288142 1.397143483 1.595484864 1.142764517 1 10.63508403 -6.321869926 2.112634997 1.356498635 0.975372165 0.464006205 0.158235728 0.245157182 2.148707979 0.052478834 0.064946107 4.77E-07 6.321869926 -0.38112647 DRS(ph)SSAPNVHINTIEPVNIDDLIR ddPTM_A459_MK2206_30min_R2 1 DRSSSAPNVHINTIEPVNIDDLIR 24 1 H7C560;A0A2R8Y8E0;A0A2U3TZI2;P15056;A0A2R8Y679;A0A2R8Y492;A0A2R8YDP5 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR 85.518 4.53E-05 2058000 1251.5 3683.2 3216.8 4518.9 4122.6 5055.3 4883.8 3258.2 5236.3 4723.1 TRUE FALSE 1347.315802 3500.297644 3324.046506 4149.691415 3960.72601 5247.682984 4242.551194 3684.057927 5691.743909 4568.985634 0.294882915 0.766099508 0.727523957 0.908230349 0.866872065 1.148544426 0.928554286 0.806318562 1.245734691 1 12.15765819 -4.735382926 0.772482249 0.998960749 4.27E-17 0.705475546 0.133648663 1.651512064 0.715996045 0.051181479 1.455509278 1.84E-05 4.735382926 -0.998960749 down DRS(ph)VSVDSGEQR ddPTM_A459_MK2206_30min_R2 1 DRSVSVDSGEQR 12 1 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 DRS(0.997)VS(0.002)VDS(0.001)GEQR 115.34 0.025064 3000600 7261.8 13201 10584 11785 12337 11771 10955 7289.7 11406 7992 TRUE FALSE 7817.768991 12545.45754 10936.86528 10822.1278 11852.58739 12218.95365 9516.595341 8242.488819 12398.07326 7731.221695 1.011194518 1.622700529 1.414636096 1.399795301 1.533080781 1.580468668 1.230930339 1.066130185 1.603637013 1 12.91648069 -10.99753648 0.358251475 0.735068489 1.414132458 0.219302739 0.209817418 35.22997482 2.599763754 8.700546963 0.160036961 1.01E-11 10.99753648 0.679063969 DRSS(ph)FYVNGLTLGGQK ddPTM_A459_MK2206_30min_R1 1 DRSSFYVNGLTLGGQK 16 1 P07737;K7EJ44;I3L3D5 P07737 PFN1 Profilin-1 1 DRS(0.127)S(0.589)FY(0.265)VNGLT(0.019)LGGQK 74.783 0.017528 10814000 5347.5 5289.5 4457.8 4673.4 4025.6 4827.3 4171.4 2995.2 3717.5 3632.5 TRUE FALSE 4892.667044 4945.152589 4155.216956 5033.346078 3865.251828 5100.617554 3893.133517 2969.013282 4103.947428 4082.521524 1.198442437 1.211298596 1.017806503 1.232901296 0.946780514 1.249379219 0.953610041 0.727249878 1.005248204 1 11.99524478 -7.439721722 6.176075728 0.888409372 1.134283095 0.465500688 0.11576415 0.186364274 11.16908032 0.0465896 0.030929541 3.63E-08 7.439721722 0.245873723 DRSS(ph)FYVNGLTLGGQK ddPTM_A459_MK2206_30min_R2 1 DRSSFYVNGLTLGGQK 16 1 P07737;K7EJ44;I3L3D5 P07737 PFN1 Profilin-1 1 DRS(0.375)S(0.624)FY(0.001)VNGLTLGGQK 94.176 0.0051822 11125000 58205 56714 40964 61450 62190 48452 63752 42983 38111 49019 TRUE FALSE 62661.21955 53897.66523 42329.71931 56429.33843 59748.10812 50295.87481 55381.28582 48601.02568 41425.82589 47419.51404 1.321422642 1.136613614 0.892664553 1.190002461 1.259989887 1.060657745 1.167900746 1.024916148 0.873602919 1 15.53319326 -7.95675645 4.01172666 0.937699383 1.139025755 0.365880944 0.112498778 0.244879276 8.328217306 0.073438459 0.030966923 1.10E-08 7.95675645 0.201326372 DRSWVIGS(ph)PEILR ddPTM_A459_MK2206_30min_R1 1 DRSWVIGSPEILR 13 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 DRS(0.003)WVIGS(0.997)PEILR 69.805 0.034524 2157400 1264.2 1205.1 1745.3 1297.3 1632.7 1298.8 1630.5 1619.3 1708.7 1168.8 TRUE FALSE 1156.673151 1126.647771 1626.833899 1397.218271 1567.666102 1372.336934 1521.73232 1605.142631 1886.32548 1313.599768 0.880536964 0.857679636 1.23845477 1.063655997 1.193412286 1.044714659 1.158444419 1.221941926 1.435997117 1 10.35931006 -5.254664111 24.74405808 1.169715459 0.869108251 0.516936197 0.116183296 358.5901626 1309602.208 0.029709279 0.074907436 5.56E-06 5.254664111 -0.300607207 DRT(ph)PPHLLYSDR ddPTM_A459_MK2206_30min_R2 1 DRTPPHLLYSDR 12 1 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 DRT(1)PPHLLYSDR 66.674 0.042342 10369000 31925 26968 27031 27868 22821 17689 32262 28745 18135 33494 TRUE FALSE 34369.20255 25628.80834 27932.20005 25591.09525 21924.93287 18362.16729 28025.96065 32502.0702 19712.34952 32401.09352 1.060742056 0.790985907 0.862075844 0.789821962 0.676672621 0.566714431 0.864969592 1.003116459 0.608385316 1 14.98375488 DRT(ph)PPHLLYSDRDR ddPTM_A459_MK2206_30min_R1 1 DRTPPHLLYSDRDR 14 2 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 DRT(1)PPHLLYSDRDR 90.614 0.02331 14154000 1739.4 1225.1 1064.1 781.8 2620.3 2266.6 2476.3 1832.3 1101.6 1028.6 TRUE FALSE 1591.454896 1145.345767 991.8718568 842.0143715 2515.927902 2394.932933 2311.110545 1816.280394 1216.115262 1156.030734 1.376654487 0.990757195 0.857997827 0.72836677 2.176350359 2.071686214 1.999177425 1.571135041 1.051974854 1 10.17496404 -6.251059746 24.99746674 1.712648526 0.979291692 0.382431762 0.403251091 716.2707423 1725007.782 0.124388877 0.158790749 5.61E-07 6.251059746 -0.733356834 DRVEEEHEDESR ddPTM_A459_MK2206_30min_R1 1 DRVEEEHEDESR 12 1 D4PHA4;Q86WP2-4;Q86WP2-3;Q86WP2;Q86WP2-2 D4PHA4 GPBP1 Vasculin 0 125.28 0.0023086 878610 788.15 922.34 727.83 664.29 860.74 637.27 797.94 537.03 452.81 711.48 FALSE TRUE 721.1137038 862.2954984 678.4269275 715.4537309 826.4549032 673.3516767 744.7108785 532.3348033 499.8812199 799.6235138 0.901816532 1.078376865 0.848432938 0.894738234 1.033555028 0.842085888 0.931326888 0.665731803 0.625145723 1 9.643177086 -7.748398305 24.77838786 0.73407909 0.934161046 0.296765735 0.116775272 199.2422939 378567.3721 0.05300783 0.030355977 1.78E-08 7.748398305 0.200081956 DRVTDALNATR ddPTM_A459_MK2206_30min_R1 1 DRVTDALNATR 11 1 P10809 P10809 HSPD1 "60 kDa heat shock protein, mitochondrial" 0 139.76 0.0032181 5385100 2262.9 2564.9 2761.6 2580.3 2127.9 1862.5 2282 1882.6 2316.2 2044.5 FALSE TRUE 2070.428472 2397.924544 2574.150286 2779.035153 2043.141237 1967.95314 2129.771944 1866.140627 2556.977279 2297.788095 0.901052833 1.043579497 1.120273141 1.209439269 0.889177397 0.856455451 0.926879179 0.812146529 1.112799428 1 11.16603004 -6.29318334 24.81237717 0.919392739 1.070491966 0.278540594 0.105619119 734.8383605 574377.6005 0.033034446 0.037460881 5.09E-07 6.29318334 0.151099226 DRWPEVSPEDTQSLSLSEES(ph)PSKETSLDVSSK ddPTM_A459_MK2206_30min_R1 1 DRWPEVSPEDTQSLSLSEESPSKETSLDVSSK 32 2 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 DRWPEVSPEDTQS(0.008)LS(0.033)LS(0.119)EES(0.518)PS(0.081)KET(0.081)S(0.098)LDVS(0.028)S(0.033)K 61.112 0.00032108 9612600 1959.8 2044 1879.1 1881.5 1549 1210 1445.8 1671.3 1685.9 1362.3 TRUE FALSE 1793.108719 1910.935228 1751.551927 2026.413456 1487.30005 1278.509154 1349.35332 1656.688 1861.155338 1531.072009 1.171145908 1.248102779 1.144003624 1.323525898 0.971410908 0.835041818 0.881312774 1.08204447 1.215589683 1 10.58032642 -6.275767082 24.7649908 0.987729886 1.218031501 0.509221695 0.107509157 619.7846239 1071276.358 0.036265453 0.041312882 5.30E-07 6.275767082 0.230301615 DS(ph)DGVDGFEAEGK ddPTM_A459_MK2206_30min_R2 2 DSDGVDGFEAEGK 13 0 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 DS(1)DGVDGFEAEGK;DS(1)DGVDGFEAEGK 214.58 1.75E-06 11421700 111457 85435 91215 75336 73681 58068 96823 72004 60842 101412 TRUE FALSE 119990.2336 81192.42213 94256.06257 69180.80781 70787.91372 60277.81843 84110.02379 81415.17003 66133.92718 98102.93475 1.223105445 0.827624804 0.960787389 0.705185915 0.721567748 0.614434406 0.857365012 0.829895357 0.674127918 1 16.58200867 -1.887493803 1.005972998 0.769513725 199.9330246 0.541387902 0.116922202 553.0198106 1.68937987 0.035963405 252628.0938 0.012957052 1.887493803 199.1635109 DS(ph)EFPIDMQPNPNLNVSK ddPTM_A459_MK2206_30min_R2 1 DSEFPIDMQPNPNLNVSK 18 0 H0Y811;Q8N0X2-2;Q8N0X2 H0Y811 SPAG16 Sperm-associated antigen 16 protein 1 DS(1)EFPIDMQPNPNLNVSK 63.936 0.024068 10091000 13172 44032 23174 72472 45382 80081 31906 34940 49220 19677 TRUE FALSE 14180.45845 41845.43491 23946.60959 66550.80577 43600.07465 83128.53857 27716.70387 39506.77797 53501.06663 19034.9411 0.744969915 2.198348536 1.258034341 3.496244376 2.290528477 4.367155019 1.45609612 2.075487271 2.810676763 1 14.21636249 -3.113410441 12.401066 2.256513833 1.566319045 0 1.087996656 0 0 0.244034543 0 0.000770175 3.113410441 -0.690194787 DS(ph)GDENEPIQER ddPTM_A459_MK2206_30min_R2 2 DSGDENEPIQER 12 0 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;Q8WX93-4;Q8WX93-7 Q8WX93 PALLD Palladin 1 DS(1)GDENEPIQER;DS(1)GDENEPIQER 109.6 0.0075714 1727000 10826.3 13666.6 9204.5 14645.7 13322.8 20466.8 11602 9146.1 14522.8 8818.5 TRUE FALSE 11655.16985 12987.93652 9511.373436 13449.09946 12799.67993 21245.67842 10078.64346 10341.52667 15785.96689 8530.753067 1.366253338 1.522484172 1.114951208 1.57654305 1.50041618 2.490480998 1.181448271 1.212264215 1.850477533 1 13.05845739 -10.69164659 4.498822946 0.999903477 1.530721912 0.150808521 0.380761028 276521619.9 51.0431373 276914.1735 0.093471702 2.03E-11 10.69164659 0.530818435 DS(ph)GGKTPGDFSYAYQKPEETTR ddPTM_A459_MK2206_30min_R2 2 DSGGKTPGDFSYAYQKPEETTR 22 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DS(0.497)GGKT(0.43)PGDFS(0.053)Y(0.019)AY(0.001)QKPEETTR;DS(0.775)GGKT(0.219)PGDFS(0.005)Y(0.001)AYQKPEETTR 53.089 0.015007 13717000 24953.7 25772.8 24830.7 29201 27711 23714 32377.7 19093.2 19303.3 29273 TRUE FALSE 26864.17446 24492.96023 25658.54314 26815.18489 26622.9269 24616.45289 28126.4691 21588.7468 20982.26614 28317.82441 0.948666609 0.86493086 0.906091611 0.946936619 0.940147326 0.869291812 0.993242584 0.762373072 0.74095615 1 14.78942281 -7.768452392 24.99996205 0.813748462 0.920589251 0.21807893 0.074639687 202.2166536 720846.462 0.037439854 0.018594458 1.70E-08 7.768452392 0.106840789 DS(ph)GRLSPDLSVCGQPR ddPTM_A459_MK2206_30min_R2 1 DSGRLSPDLSVCGQPR 16 1 Q8TF76-2;Q8TF76 Q8TF76-2 GSG2 Serine/threonine-protein kinase haspin 1 DS(0.947)GRLS(0.053)PDLSVCGQPR 96.707 0.0044076 16573000 10051 11030 14606 14258 11610 12445 16463 10484 11416 12574 TRUE FALSE 10820.51229 10482.26624 15092.95675 13093.07579 11154.13306 12918.6032 14301.38832 11854.2948 12408.94304 12163.71141 0.88957325 0.86176545 1.240818385 1.076404672 0.917000798 1.062060975 1.17574216 0.974562319 1.020160922 1 13.57029587 -5.202983071 24.99980658 1.057358154 0.87566892 0.401212186 0.089259692 270.3764261 115629.6965 0.023245434 0.061501696 6.27E-06 5.202983071 -0.181689234 DS(ph)GVGASLTR ddPTM_A459_MK2206_30min_R2 1 DSGVGASLTR 10 0 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8;Q92502;Q92502-2;Q96QB1-6;Q96QB1-4;Q96QB1-1;Q96QB1 H3BRG5;Q96QB1-6 STARD13;STARD8;DLC1 StAR-related lipid transfer protein 13;StAR-related lipid transfer protein 8;Rho GTPase-activating protein 7 1 DS(1)GVGASLTR 126.03 0.0035263 4982800 21929 20191 20190 24883 19675 20232 26173 20333 21518 27566 TRUE FALSE 23607.9011 19188.3443 20863.12452 22849.9793 18902.46064 21001.94294 22736.45366 22990.59291 23389.59674 26666.52368 0.885301038 0.71956677 0.782371365 0.856878819 0.708846075 0.787577083 0.852621584 0.862151857 0.877114581 1 14.70274214 -8.46728673 0.738818747 0.997813201 0.786258089 0.587389146 0.052689265 0.480351795 0.597851813 0.050540396 0.019643902 3.41E-09 8.46728673 -0.211555113 DS(ph)HSPDLQLPTPEVIPSSGSK ddPTM_A459_MK2206_30min_R1 2 DSHSPDLQLPTPEVIPSSGSK 21 0 H3BQK9;H3BPE1;H0Y4F5;H0Y6T5 H3BQK9 MACF1 1 DS(0.705)HS(0.295)PDLQLPTPEVIPSSGSK;DS(0.5)HS(0.5)PDLQLPTPEVIPSSGSK 130.14 3.56E-05 35611000 10662.3 10658.9 10785.3 9201 10844.3 10491.9 13821 12012.3 12579.8 13083.2 TRUE FALSE 9755.415395 9965.003673 10053.22389 9909.662614 10412.34857 11085.94231 12899.02631 11907.27773 13887.51523 14704.04559 0.663451112 0.677704895 0.683704619 0.673941233 0.708128148 0.753938244 0.877243357 0.809796029 0.944469 1 13.84392552 -7.625765633 0.579062895 0.998771364 0.657830876 0.936498802 0.029409196 0.179356006 0.125765209 0.027864007 0.017392761 2.37E-08 7.625765633 -0.340940488 DS(ph)LGAYASQDANEQGQDLGKR ddPTM_A459_MK2206_30min_R1 2 DSLGAYASQDANEQGQDLGKR 21 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DS(1)LGAYASQDANEQGQDLGKR;DS(0.999)LGAY(0.001)ASQDANEQGQDLGKR 187.04 6.88E-17 45023000 2708.6 3335.5 3565.4 2720 2766.6 3015.2 3465.1 3094.1 3363.5 3149.1 TRUE FALSE 2478.219347 3118.358344 3323.390582 2929.494871 2656.400464 3185.918018 3233.949501 3067.04861 3713.147861 3539.234282 0.700213422 0.88108277 0.939014012 0.827719964 0.75055796 0.900171552 0.913742703 0.866585359 1.049138759 1 11.78922155 -7.951471182 1.079957026 1.021281484 0.835390738 0.483680373 0.071837111 0.474295007 1.009087393 0.066662544 0.02437406 1.12E-08 7.951471182 -0.185890746 DS(ph)LGTYSSR ddPTM_A459_MK2206_30min_R1 2 DSLGTYSSR 9 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DS(0.976)LGT(0.024)YSSR;DS(0.907)LGT(0.088)YS(0.004)SR 144.17 0.0019696 85399000 6119.2 7706 7756.9 6680.5 7748 7742.5 8229 6762.3 7902.8 8820 TRUE FALSE 5598.729907 7204.337999 7230.38324 7195.033268 7439.380753 8180.873659 7680.058425 6703.177924 8724.32434 9912.688188 0.5648044 0.726779443 0.729406908 0.725840774 0.750490746 0.82529315 0.774770504 0.676222009 0.880116894 1 13.27506063 -14.52287875 0.063902497 1.919742735 0.375830345 0.705484149 0.060586942 217.9718894 1.00820558 30.6214479 4.532149947 3.00E-15 14.52287875 -1.54391239 DS(ph)LGTYSSR ddPTM_A459_MK2206_30min_R2 2 DSLGTYSSR 9 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DS(0.98)LGT(0.019)YSSR;DS(1)LGTYSSR 131.42 0.0036081 71720500 99284 93038 95897 113883 92658 97758 112956 89421 90898 119399 TRUE FALSE 106885.2594 88417.86821 99094.15812 104578.3946 89019.78135 101478.2492 98124.74152 101108.6317 98804.14373 115503.0204 0.925389301 0.76550265 0.857935643 0.905416969 0.770713883 0.878576585 0.849542645 0.875376517 0.855424762 1 16.81757105 -10.606082 0.454090288 1.058980084 0.845935194 0.449288402 0.048579312 16.78931183 2.156605003 1.313252613 0.025062062 2.48E-11 10.606082 -0.21304489 DS(ph)LSPVLHPSDLILTR ddPTM_A459_MK2206_30min_R2 1 DSLSPVLHPSDLILTR 16 0 Q9HCN4-3;Q9HCN4-2;Q9HCN4-4;Q9HCN4;Q9HCN4-5 Q9HCN4-3 GPN1 GPN-loop GTPase 1 1 DS(0.771)LS(0.229)PVLHPSDLILTR 69.612 0.029602 2527600 3180.9 7686.5 5954.1 11508 11782 15487 9719.3 5806.2 14067 5072.7 TRUE FALSE 3424.43215 7304.799587 6152.606722 10567.75959 11319.37948 16076.36864 8443.144235 6565.090276 15290.52223 4907.178214 0.697841407 1.488594721 1.253797285 2.153530833 2.306698266 3.276092274 1.720570125 1.337854463 3.115950056 1 12.26067795 -5.742647586 4.320554932 2.187972575 1.157138613 0.298687312 0.688027349 0.251236244 10.8207722 0.191494148 0.324656029 1.81E-06 5.742647586 -1.030833962 DS(ph)PGIPPSANAHQLFR ddPTM_A459_MK2206_30min_R1 3 DSPGIPPSANAHQLFR 16 0 B4DG22;B1AXG1;B7ZB17;P51812 B4DG22 RPS6KA3 Ribosomal protein S6 kinase alpha-3 1 DS(1)PGIPPSANAHQLFR;DS(1)PGIPPSANAHQLFR;DS(1)PGIPPSANAHQLFR 97.203 0.0051254 28663300 13377.5 9013.1 11378 9671 10062.3 12021.8 12031.7 10455.9 10346.6 11920.6 TRUE FALSE 12239.67338 8426.345552 10605.69306 10415.8621 9661.497284 12702.46393 11229.08725 10364.48517 11422.1661 13397.41392 0.913584774 0.62895314 0.791622407 0.777453183 0.721146435 0.948128049 0.838153341 0.773618344 0.852564992 1 13.70966693 -6.746351896 24.99993769 0.865572882 0.760906026 0.291579769 0.088194786 336.1382677 556979.6279 0.028125988 0.028019357 1.79E-07 6.746351896 -0.104666856 DS(ph)PGIPPSANAHQLFR ddPTM_A459_MK2206_30min_R2 6 DSPGIPPSANAHQLFR 16 0 B4DG22;B1AXG1;B7ZB17;P51812 B4DG22 RPS6KA3 Ribosomal protein S6 kinase alpha-3 1 DS(1)PGIPPSANAHQLFR;DS(1)PGIPPSANAHQLFR;DS(1)PGIPPSANAHQLFR;DS(0.999)PGIPPS(0.001)ANAHQLFR;DS(1)PGIPPSANAHQLFR;DS(1)PGIPPSANAHQLFR 142.57 0.00039403 68402000 410777 405266 407273.1 586791 449519 443396 570372 440376 344996.3 455205 TRUE FALSE 442226.403 385141.0798 420851.3819 538848.2982 431868.6254 460269.7455 495481.4713 497934.6552 375003.4546 440351.6981 1.00425729 0.874621539 0.955716496 1.223677121 0.980735688 1.045232135 1.125194869 1.130765834 0.851599883 1 18.7482967 -5.549465046 24.99998064 1.058959204 0.933371637 0.192402191 0.098961166 287.6130368 270450.8031 0.025966508 0.044976808 2.82E-06 5.549465046 -0.125587567 DS(ph)PQSLTDESCSEK ddPTM_A459_MK2206_30min_R1 1 DSPQSLTDESCSEK 14 0 Q9BV36;Q9BV36-4;Q9BV36-2 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 DS(0.998)PQSLT(0.002)DESCSEK 118.9 0.0022904 1798200 999.94 1009.2 1348.8 1033 1016.3 881.04 1041.1 1154.2 1192.2 1146.8 TRUE FALSE 914.8898521 943.5008966 1257.247214 1112.561839 975.8186189 930.9237234 971.6501186 1144.108951 1316.133456 1288.874242 0.7098364 0.732034877 0.97546151 0.86320434 0.757109256 0.722276614 0.753875038 0.887680826 1.021149631 1 10.33189579 -8.05360869 3.27359841 1.008184763 0.792413063 0.578287173 0.075807398 0.207598922 4.261667285 0.063909971 0.022386866 8.84E-09 8.05360869 -0.2157717 DS(ph)PQSLTDESCSEK ddPTM_A459_MK2206_30min_R2 1 DSPQSLTDESCSEK 14 0 Q9BV36;Q9BV36-4;Q9BV36-2 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 DS(0.998)PQSLT(0.001)DESCSEK 142.4 0.00054645 3064700 26419 30609 27472 28036 30140 25573 35350 23677 25423 29708 TRUE FALSE 28441.65895 29089.00157 28387.90277 25745.36912 28956.55216 26546.19843 30708.50254 26771.6652 27634.24659 28738.63039 0.989666472 1.012191645 0.987795952 0.895845375 1.007582886 0.923711328 1.068544399 0.931556752 0.961571453 1 14.81070369 DS(ph)PVIVR ddPTM_A459_MK2206_30min_R1 2 DSPVIVR 7 0 I3L2J0 I3L2J0 CIC 1 DS(1)PVIVR;DS(1)PVIVR 107.57 0.016637 7914800 4351.4 4754.9 4699.9 3402.3 3977.4 3815.7 5064.1 4331.8 5739.1 6199.9 TRUE FALSE 3981.29058 4445.355146 4380.883883 3664.345736 3818.971736 4031.741637 4726.283129 4293.927529 6335.699983 6967.990419 0.57136855 0.637968034 0.628715543 0.525882717 0.54807362 0.578608952 0.678284964 0.616236141 0.909257849 1 12.76652692 -8.326223015 2.440783856 1.003833881 0.593489535 0.919117515 0.042711607 0.075518236 0.845592489 0.04327041 0.012155015 4.72E-09 8.326223015 -0.410344345 DS(ph)PVIVR ddPTM_A459_MK2206_30min_R2 2 DSPVIVR 7 0 I3L2J0 I3L2J0 CIC 1 DS(1)PVIVR;DS(1)PVIVR 110.87 0.015231 5087700 64535 63821 73042 73383 57278 54406 74677 57597 47185 79424 TRUE FALSE 69475.84922 60651.74194 75477.18382 67387.37416 55028.97792 56476.45845 64871.8202 65125.12566 51289.06601 76832.40138 0.904251956 0.78940318 0.98236138 0.877069738 0.716220981 0.735060436 0.844328942 0.8476258 0.667544748 1 16.22942723 -6.085495421 9.855866697 0.7931371 0.889680648 0.160500742 0.096074415 0.803341646 88.52141084 0.027319928 0.035313681 8.21E-07 6.085495421 0.096543548 DS(ph)PYQSR ddPTM_A459_MK2206_30min_R2 2 DSPYQSR 7 0 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 DS(1)PYQSR;DS(1)PYQSR 99.788 0.020987 10435700 81778 42264 50402 47464 56760 28622 59703 94772 51314 81012 TRUE FALSE 88038.98656 40165.23122 52082.37752 43586.03937 54531.3172 29711.23027 51863.92438 107159.0258 55777.19897 78368.58507 1.123396403 0.512516989 0.664582338 0.556167236 0.695831335 0.379121688 0.661794829 1.367372216 0.711729055 1 16.25798783 -7.628230517 11.09912898 1.029196795 0.636091097 0.343562774 0.23357228 0.386315743 38.05301019 0.104050393 0.060017663 2.35E-08 7.628230517 -0.393105698 DS(ph)QDGSSYR ddPTM_A459_MK2206_30min_R1 2 DSQDGSSYR 9 0 Q14847;Q14847-2;C9J9W2;Q14847-3;J3KSN1 Q14847 LASP1 LIM and SH3 domain protein 1 1 DS(1)QDGSSYR;DS(1)QDGSSYR 148.13 0.0015654 13799400 6047.8 6700.4 5257.8 4515.4 4088.1 3826.7 5979.6 5579.1 2789.33 5713.4 TRUE FALSE 5533.402852 6264.202742 4900.915185 4863.17689 3925.26232 4043.364447 5580.711794 5530.322517 3079.290835 6421.219126 0.861737116 0.975547263 0.763237493 0.75736037 0.611295494 0.629687972 0.869104711 0.861257404 0.479549253 1 12.64863152 -5.36832764 5.107970662 0.735195132 0.917427499 0.187775096 0.142490246 0.325577306 12.58784558 0.036774162 0.079285243 4.28E-06 5.36832764 0.182232367 DS(ph)QDGSSYR ddPTM_A459_MK2206_30min_R2 3 DSQDGSSYR 9 0 Q14847;Q14847-2;C9J9W2;Q14847-3;J3KSN1 Q14847 LASP1 LIM and SH3 domain protein 1 1 DS(0.996)QDGS(0.004)SYR;DS(0.999)QDGS(0.001)SYR;DS(0.972)QDGS(0.022)S(0.007)YR 138.2 0.0024868 129793000 101154 86594.1 90372.5 92807.4 91263.5 89198.3 124952 84913.6 82001.9 118788.9 TRUE FALSE 108898.428 82293.96291 93385.47404 85224.73854 87680.03643 92592.80381 108545.6523 96012.09907 89134.27704 114912.8279 0.947661197 0.716142526 0.812663614 0.741646865 0.763013477 0.805765601 0.944591255 0.835521158 0.775668641 1 16.81018033 -7.03068721 20.22672071 0.875230348 0.789130737 0.224036441 0.081128026 106.2097995 70004.18258 0.029799808 0.023152422 9.32E-08 7.03068721 -0.08609961 DS(ph)RPLSPILHIVK ddPTM_A459_MK2206_30min_R2 2 DSRPLSPILHIVK 13 1 O95487-2;O95487;O95487-3 O95487-2 SEC24B Protein transport protein Sec24B 1 DS(0.741)RPLS(0.259)PILHIVK;DS(0.556)RPLS(0.444)PILHIVK 90.476 0.011589 14744400 75137 87809 89291 88156 79847 79937 85256 70580 64097 88027 TRUE FALSE 80889.54649 83448.53275 92267.91737 80953.3728 76711.80558 82979.05855 74061.78479 79805.04834 69672.0412 85154.6862 0.949913036 0.979964069 1.083533056 0.95066257 0.900852425 0.974450876 0.869732344 0.937177411 0.818182114 1 16.37779831 -5.992728254 24.94303358 0.915184591 1.004532529 0.320191201 0.057182698 195.1737157 669462.3413 0.015592069 0.023072367 1.02E-06 5.992728254 0.089347938 DS(ph)SKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_A459_MK2206_30min_R2 1 DSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 45 2 Q12906-7;Q12906-4;Q12906-6 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.258)S(0.258)KGEDS(0.226)AEET(0.258)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 56.638 5.79E-06 8566400 49196 60826 56234 48454 50809 27140 62262 50677 42771 69880 TRUE FALSE 52962.48359 57805.46929 58108.81349 44495.1532 48813.98337 28172.83172 54086.92461 57300.6579 46491.14427 67599.82132 0.783470763 0.855112753 0.859600105 0.658214065 0.722102254 0.416758967 0.80010455 0.847645109 0.687740638 1 16.04473181 -10.15023286 12.26217786 1 0.736817218 0.28203391 0.126005917 0 0 0.129781445 0.031476624 7.08E-11 10.15023286 -0.263182782 DS(ph)SVASSVYARTGHLVG ddPTM_A459_MK2206_30min_R1 1 DSSVASSVYARTGHLVG 17 1 Q6L980 Q6L980 SNCAIP 1 DS(0.806)S(0.135)VAS(0.029)S(0.029)VY(0.001)ARTGHLVG 54.09 0.035753 5314700 203.75 166.12 283.31 202.77 164.97 131.39 282.54 261.07 124.13 166.54 TRUE FALSE 186.4199926 155.3055578 264.0797065 218.3873805 158.3988956 138.8291883 263.6922721 258.7874925 137.0337577 187.1722325 0.995981028 0.829746783 1.410891471 1.166772323 0.846273475 0.741718931 1.408821536 1.382616903 0.732126533 1 7.548222613 -7.266631532 24.97893702 1.162775956 1.010356189 0.055018671 0.252514057 1351.395764 6501405.349 0.107804599 0.075172859 5.41E-08 7.266631532 -0.152419767 DS(ph)YGGPPR ddPTM_A459_MK2206_30min_R2 2 DSYGGPPR 8 0 H3BT71;H0Y6E7;P38159;P38159-2;H3BUY5;Q96E39 H3BT71;P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 1 DS(1)YGGPPR;DS(1)YGGPPR 125.71 0.0050199 22163500 148968 113585 122997 138856 121710 106780 139958 106895 89907 150579 TRUE FALSE 160373.1046 107944.5341 127097.6586 127511.0206 116931.0539 110843.5877 121581.3465 120866.5435 97726.94835 145665.6196 1.100967442 0.741043318 0.872530244 0.87536799 0.802736117 0.760945431 0.834660552 0.829753403 0.670899205 1 17.15230088 -4.751935244 24.99760638 0.816868829 1.100968004 0.49835357 0.084216242 303.8663025 799167.3409 0.019643161 0.246242878 1.77E-05 4.751935244 0.284099176 DS(ph)YVGDEAQSK ddPTM_A459_MK2206_30min_R1 2 DSYVGDEAQSK 11 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle" 1 DS(1)YVGDEAQSK;DS(1)YVGDEAQSK 187.74 1.94E-05 27115000 5643.8 6713.1 7051.2 5085 5152 4407.5 9973 6215.2 5606 6532.3 TRUE FALSE 5163.765173 6276.07597 6572.58419 5476.647581 4946.78493 4657.048841 9307.719367 6160.861162 6188.763761 7341.57064 0.703359734 0.854868294 0.895255867 0.745977646 0.673804717 0.634339581 1.267810367 0.839174812 0.842975443 1 12.84187303 -7.224552539 24.9943969 0.974088467 0.758760195 0.429988181 0.132715779 629.0868011 426267.5972 0.052469392 0.040641549 5.96E-08 7.224552539 -0.215328272 DS(ph)YVGDEAQSK ddPTM_A459_MK2206_30min_R2 1 DSYVGDEAQSK 11 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle" 1 DS(1)YVGDEAQSK 84.169 0.036702 6547200 21287 17328 16264 16249 17928 8144.5 15108 10166 10511 19068 TRUE FALSE 22916.74909 16467.51672 16806.23364 14921.40472 17224.05664 8454.444655 13124.30145 11494.73111 11425.22778 18445.81272 1.242382184 0.892750944 0.911113752 0.808931813 0.933765126 0.458339504 0.71150573 0.623162084 0.619394111 1 14.17100574 -1.869837641 0.500158097 0.685472256 12.27994956 0.502036653 0.151187536 57.81674772 0.883219854 0.08133295 682.4614914 0.013494673 1.869837641 11.5944773 DS(ph)YYVYTQQELK ddPTM_A459_MK2206_30min_R1 2 DSYYVYTQQELK 12 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 DS(1)YYVYTQQELK;DS(1)YYVYTQQELK 272.09 6.67E-34 40570000 6712.3 6736 7439.7 5095.1 5046.6 5763.2 6692 5547.5 7771.5 7031.7 TRUE FALSE 6141.383637 6297.485176 6934.713892 5487.525485 4845.583236 6089.507404 6245.58889 5498.998792 8579.375236 7902.840083 0.777110959 0.796863547 0.877496421 0.694373849 0.613144539 0.770546707 0.790296757 0.695825644 1.085606585 1 12.9481555 -8.26316256 24.99779272 1.042803326 0.7529899 0.731670118 0.070450847 84.09440277 1219884.21 0.061482217 0.019064336 5.46E-09 8.26316256 -0.289813426 DS(ph)YYVYTQQELK ddPTM_A459_MK2206_30min_R2 4 DSYYVYTQQELK 12 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 DS(1)YYVYTQQELK;DS(1)YYVYTQQELK;DS(1)YYVYTQQELK;DS(1)YYVYTQQELK 241.41 1.99E-13 32448900 213959 174013 182113 179401 179346 152502 215894 156432 128965 187102 TRUE FALSE 230339.8655 165371.7675 188184.5565 164743.3644 172303.9749 158305.5705 187546.8585 176878.1995 140182.1426 180996.8771 1.2726179 0.913671938 1.039711621 0.910200038 0.951972088 0.874631502 1.036188367 0.977244483 0.774500339 1 17.46560528 -4.758160839 24.97426339 0.94450965 1.27261836 0.630608062 0.075887478 58.14503156 442846.4857 0.018179717 0.127332595 1.75E-05 4.758160839 0.328108709 DSAAPS(ph)PIPGADNLSADPVVSPPTSIPFK ddPTM_A459_MK2206_30min_R1 2 DSAAPSPIPGADNLSADPVVSPPTSIPFK 29 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 DS(0.03)AAPS(0.878)PIPGADNLS(0.093)ADPVVSPPTSIPFK;DS(0.079)AAPS(0.888)PIPGADNLS(0.032)ADPVVS(0.001)PPTSIPFK 116.13 9.68E-14 16164600 10092 10884.3 10903 10337.6 10951.9 9690 11163.1 11437.3 10634 10499.5 TRUE FALSE 9233.622405 10175.73009 10162.93474 11133.80374 10515.66263 10238.63943 10418.42997 11337.30489 11739.44235 11800.25733 0.782493309 0.862331203 0.861246874 0.943522114 0.891138417 0.867662386 0.88289854 0.960767598 0.994846301 1 13.5265307 -1.522878748 0.122524093 1.045685519 0.296716942 0.712179356 0.034978085 57.05651445 0.480511992 0.250175328 7.311673053 0.03 1.522878748 -0.748968577 DSAAPSPIPGADNLS(ph)ADPVVSPPTSIPFK ddPTM_A459_MK2206_30min_R2 1 DSAAPSPIPGADNLSADPVVSPPTSIPFK 29 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 DS(0.014)AAPS(0.104)PIPGADNLS(0.882)ADPVVSPPTSIPFK 96.287 1.11E-07 8198400 50726 60946 54672 63072 56656 53686 71683 54250 61257 64634 TRUE FALSE 54609.62156 57919.51026 56494.73719 57918.81584 54431.40077 55729.05835 62270.93599 61340.66127 66585.02313 62524.99787 0.873404613 0.926341659 0.903554404 0.926330553 0.87055422 0.891308441 0.995936635 0.98105819 1.064934433 1 15.93214548 -7.335666164 3.830271733 1.012633414 0.899836429 0.81064175 0.026555681 0.102847373 2.921734667 0.011687938 0.007706918 4.62E-08 7.335666164 -0.112796985 DSAIPVES(ph)DTDDEGAPR ddPTM_A459_MK2206_30min_R1 2 DSAIPVESDTDDEGAPR 17 0 C9JA08;Q96D46 C9JA08 NMD3 60S ribosomal export protein NMD3 1 DSAIPVES(0.983)DT(0.017)DDEGAPR;DSAIPVES(0.975)DT(0.025)DDEGAPR 266.44 5.84E-42 59999000 15600.2 15480 16345 13979.1 16726.6 15385.2 15558.4 14390.6 12095.7 12126.6 TRUE FALSE 14273.32107 14472.24919 15235.54694 15055.7727 16060.3441 16256.29673 14520.52752 14264.7845 13353.0913 13628.93476 1.047280754 1.061876767 1.117882447 1.104691817 1.178400542 1.192778234 1.065419109 1.046654398 0.979760453 1 13.73438518 -7.813907192 2.226952307 0.995111923 1.116555033 0.555592251 0.044026001 0.264296511 2.568032877 0.034897275 0.014088621 1.53E-08 7.813907192 0.12144311 DSAIPVES(ph)DTDDEGAPR ddPTM_A459_MK2206_30min_R2 3 DSAIPVESDTDDEGAPR 17 0 C9JA08;Q96D46 C9JA08 NMD3 60S ribosomal export protein NMD3 1 DSAIPVES(0.5)DT(0.5)DDEGAPR;DSAIPVES(0.972)DT(0.028)DDEGAPR;DSAIPVES(0.87)DT(0.13)DDEGAPR 281.67 8.38E-64 139018000 175044 193752 182968 218011 210742 188708 210004 136266.2 180111 187925 TRUE FALSE 188445.5032 184130.5574 189068.0618 200198.8039 202467.2102 195889.4152 182430.2225 154076.6602 195776.7292 181793.0226 1.036593707 1.012858221 1.040018253 1.101245807 1.113723768 1.077540889 1.003505084 0.84753891 1.07692103 1 17.4719373 -7.467570399 5.779367086 0.963101672 1.063030111 0.310817309 0.059789077 0.227623656 16.76579988 0.025812965 0.016866475 3.41E-08 7.467570399 0.099928439 DSAIPVESDT(ph)DDEGAPR ddPTM_A459_MK2206_30min_R2 1 DSAIPVESDTDDEGAPR 17 0 C9JA08;Q96D46 C9JA08 NMD3 60S ribosomal export protein NMD3 1 DS(0.001)AIPVES(0.201)DT(0.799)DDEGAPR 85.473 0.027377 3431800 6964.5 7634.2 5033.5 6959.6 6631.5 4803.3 7354.3 5922.5 4744.6 7216.8 TRUE FALSE 7497.707475 7255.096729 5201.314378 6390.978417 6371.113989 4986.092947 6388.671576 6696.591085 5157.276732 6981.316407 1.073967578 1.039216146 0.745033469 0.915440304 0.912594935 0.714205267 0.915109874 0.959216098 0.73872554 1 12.76928338 -5.134211519 6.676640351 0.861635753 1.064669497 0.408845061 0.093632367 0.21383288 10.51380977 0.022869322 0.062120324 7.34E-06 5.134211519 0.203033744 DSALAEAPEGLS(ph)PAPPAR ddPTM_A459_MK2206_30min_R1 4 DSALAEAPEGLSPAPPAR 18 0 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 DSALAEAPEGLS(1)PAPPAR;DSALAEAPEGLS(1)PAPPAR;DSALAEAPEGLS(1)PAPPAR;DSALAEAPEGLS(1)PAPPAR 238.05 6.73E-25 160769300 17111 16793.4 16753.3 14661 17837.2 15815.9 17736.6 14945.4 14700 13748.5 TRUE FALSE 15655.6196 15700.14661 15616.13267 15790.19276 17126.70655 16711.38259 16553.42378 14814.73394 16228.1176 15451.76798 1.01319277 1.016074447 1.010637275 1.02190201 1.10839786 1.081519126 1.071296424 0.958772742 1.050243417 1 13.9154843 -1.570992959 18.8997233 1.03513078 0.005182704 0 0.042119311 0 0 0.010257844 0 0.02685388 1.570992959 -1.029948076 DSALAEAPEGLS(ph)PAPPAR ddPTM_A459_MK2206_30min_R2 4 DSALAEAPEGLSPAPPAR 18 0 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 DSALAEAPEGLS(1)PAPPAR;DSALAEAPEGLS(1)PAPPAR;DS(0.001)ALAEAPEGLS(0.999)PAPPAR;DSALAEAPEGLS(1)PAPPAR 230.27 7.63E-19 124285000 123835 141450 126678 160432 140840 145950 150687 112964 121113 138579 TRUE FALSE 133315.9028 134425.7987 130901.3813 147324.1924 135309.9139 151504.2295 130901.6159 127728.7827 131647.1898 134057.1786 0.994470451 1.002749723 0.976459319 1.098965337 1.009344784 1.130146339 0.976461069 0.952793308 0.98202268 1 17.03248895 -7.471916108 24.99997499 0.97336985 1.034605611 0.271504252 0.045959074 460.1130768 225711.1556 0.019468647 0.013125571 3.37E-08 7.471916108 0.061235761 DSAPSTPT(ph)SPTEFLTPGLR ddPTM_A459_MK2206_30min_R1 2 DSAPSTPTSPTEFLTPGLR 19 0 Q9NZJ4-2;Q9NZJ4 Q9NZJ4-2 SACS Sacsin 1 DSAPSTPT(0.613)S(0.384)PT(0.003)EFLTPGLR;DSAPS(0.002)T(0.002)PT(0.496)S(0.496)PT(0.003)EFLTPGLR 244.18 6.72E-30 32634000 5707.7 5209.2 4705.6 4440.9 4641.3 4385.3 4719.9 3923.7 3955.9 3638.6 TRUE FALSE 5222.230143 4870.080133 4386.196983 4782.938887 4456.427193 4633.591896 4405.044083 3889.395505 4367.129961 4089.377238 1.277023331 1.190909972 1.072583117 1.1696008 1.089756932 1.133080082 1.077191911 0.951097264 1.067920543 1 11.99766544 -1.522878745 0.217914795 0.989349431 2.389543693 0.702375747 0.048805592 29.56312936 0.375950722 0.080281285 14.51230937 0.03 1.522878745 1.400194262 DSAPSTPT(ph)SPTEFLTPGLR ddPTM_A459_MK2206_30min_R2 1 DSAPSTPTSPTEFLTPGLR 19 0 Q9NZJ4-2;Q9NZJ4 Q9NZJ4-2 SACS Sacsin 1 DSAPSTPT(0.333)S(0.333)PT(0.333)EFLT(0.002)PGLR 120.9 0.0010116 6651300 17822 31516 26136 26352 26817 28394 18230 15741 22001 23391 TRUE FALSE 19186.46602 29950.96127 27007.3612 24198.9573 25764.02984 29474.55357 15836.3791 17798.40275 23914.60721 22627.75359 0.847917402 1.323638299 1.193550261 1.069437017 1.138603076 1.302584167 0.69986528 0.786574004 1.056870587 1 14.46580574 -7.259239871 24.99762336 0.86804197 1.152382695 0.399986726 0.155351975 186.0700615 2114719.15 0.060078131 0.044219459 5.51E-08 7.259239871 0.284340725 DSAPSTPTS(ph)PTEFLTPGLR ddPTM_A459_MK2206_30min_R2 1 DSAPSTPTSPTEFLTPGLR 19 0 Q9NZJ4-2;Q9NZJ4 Q9NZJ4-2 SACS Sacsin 1 DSAPS(0.008)T(0.061)PT(0.221)S(0.7)PT(0.01)EFLTPGLR 151.11 2.33E-05 7482000 22798 35715 30878 33294 33493 28546 29446 21435 23083 25727 TRUE FALSE 24543.43241 33941.44503 31907.45711 30573.7737 32177.89653 29632.33803 25579.70483 24236.6281 25090.71762 24887.5301 0.986173892 1.363793229 1.282066038 1.228477618 1.292932501 1.190650013 1.02781211 0.97384626 1.00816423 1 14.60313544 -7.237987379 3.037677935 0.993982915 1.241081774 0.581924786 0.092503172 0.178140777 3.336297003 0.039376346 0.027440412 5.78E-08 7.237987379 0.247098859 DSAVAISGADS(ph)R ddPTM_A459_MK2206_30min_R2 1 DSAVAISGADSR 12 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DSAVAISGADS(1)R 103.83 0.010331 3418300 39836 45938 41043 52925 47130 45047 52128 36397 47290 42228 TRUE FALSE 42885.87479 43656.78572 42411.35314 48600.8582 45279.43939 46761.29515 45283.53098 41154.21287 51403.19872 40850.10382 1.049835148 1.068706849 1.03821898 1.189736467 1.108428992 1.144704438 1.108529153 1.007444511 1.25833704 1 15.31805212 -5.712325978 24.99988527 1.117527438 1.053898864 0.14277679 0.072357767 219.0232672 111486.1639 0.018472432 0.031995137 1.94E-06 5.712325978 -0.063628574 DSAYFS(ph)DNDSEPEKR ddPTM_A459_MK2206_30min_R2 1 DSAYFSDNDSEPEKR 15 1 Q8IWU2 Q8IWU2 LMTK2 Serine/threonine-protein kinase LMTK2 1 DS(0.002)AYFS(0.997)DNDS(0.001)EPEKR 62.468 0.038972 5155800 22458 19645 13978 14552 18795 16472 21783 15924 14995 18045 TRUE FALSE 24177.40175 18669.45787 14444.01954 13363.05505 18057.01386 17098.8535 18922.86593 18005.32148 16299.238 17456.19313 1.385032898 1.069503398 0.827443844 0.765519432 1.034418772 0.97952935 1.084020198 1.031457509 0.933722369 1 14.09145135 -4.814521116 3.444638174 0.958781209 1.422691416 0.660496068 0.092249492 0.180954126 3.547804647 0.0259243 0.21030445 1.53E-05 4.814521116 0.463910208 DSAYISS(ph)SPLGSHQVFDFR ddPTM_A459_MK2206_30min_R1 3 DSAYISSSPLGSHQVFDFR 19 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 DSAYISS(0.575)S(0.425)PLGSHQVFDFR;DSAYIS(0.004)S(0.813)S(0.183)PLGSHQVFDFR;DSAYIS(0.003)S(0.573)S(0.424)PLGSHQVFDFR 168.81 3.19E-09 157016000 11228.1 9023.2 9337.6 7440.8 12197 10502 10653.8 9601.6 8126.1 7635.7 TRUE FALSE 10273.09113 8435.78804 8703.789728 8013.891705 11711.16766 11096.61416 9943.104441 9517.654223 8970.837175 8581.668163 1.197097224 0.98300096 1.014230516 0.933838451 1.36467263 1.293060272 1.158644712 1.109068079 1.045348877 1 13.0670424 -4.47325103 21.92104868 1.110564868 2.256545399 0.041359382 0.131701192 61.23584878 464589.8394 0.034663242 59520.14119 3.36E-05 4.47325103 1.145980531 DSAYISS(ph)SPLGSHQVFDFR ddPTM_A459_MK2206_30min_R2 1 DSAYISSSPLGSHQVFDFR 19 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 DSAY(0.003)IS(0.015)S(0.441)S(0.441)PLGS(0.099)HQVFDFR 71.042 0.0099277 7001100 26719 26730 25365 21406 22160 15162 25239 21571 17759 25455 TRUE FALSE 28764.62718 25402.62707 26210.65644 19657.06133 21289.88705 15739.00053 21925.08898 24390.40376 19303.64572 24624.40543 1.168134892 1.031603672 1.06441784 0.798275572 0.864584817 0.639162662 0.890380441 0.990497165 0.783923322 1 14.58780127 -5.727626141 7.98540554 0.845231325 1.083691858 0.522807818 0.102996949 0.180721505 35.83105524 0.028428314 0.048687718 1.87E-06 5.727626141 0.238460533 DSAYISSS(ph)PLGSHQVFDFR ddPTM_A459_MK2206_30min_R1 1 DSAYISSSPLGSHQVFDFR 19 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 DSAYISS(0.391)S(0.605)PLGS(0.003)HQVFDFR 195.17 3.36E-15 12720000 2084.4 1635.2 1564.8 1353.1 2298.4 1915.7 2094.8 1783.8 1725.2 1715.2 TRUE FALSE 1907.110834 1528.748183 1458.585736 1457.315996 2206.849861 2024.165278 1955.059714 1768.204425 1904.540714 1927.691925 0.989323454 0.793045903 0.756648776 0.755990092 1.1448146 1.050046043 1.01419718 0.917265047 0.987990191 1 10.91265879 -6.249082726 24.89078215 1.016222376 0.816765663 0.579737722 0.081353198 552.9067857 1113754.229 0.025516737 0.032701191 5.64E-07 6.249082726 -0.199456713 DSAYISSS(ph)PLGSHQVFDFR ddPTM_A459_MK2206_30min_R2 1 DSAYISSSPLGSHQVFDFR 19 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 DSAYISS(0.046)S(0.954)PLGSHQVFDFR 178.22 4.59E-13 48120000 35887 57999 54662 64715 48649 63236 54008 46731 55717 43040 TRUE FALSE 38634.53631 55118.854 56484.4038 59427.57749 46738.79582 65642.49029 46916.68472 52838.90215 60563.16395 41635.60832 0.927920544 1.323839286 1.356636929 1.427325789 1.122567862 1.576594961 1.12684038 1.269079624 1.454600194 1 15.34553028 -4.759974673 24.95569086 1.307859415 0.92792007 0.304590138 0.165541723 41.67968171 709888.6093 0.037916248 0.231958441 1.74E-05 4.759974673 -0.379939345 DSAYQSITHYRPVS(ph)ASR ddPTM_A459_MK2206_30min_R2 1 DSAYQSITHYRPVSASR 17 1 P50402;Q5HY57 P50402 EMD Emerin 1 DSAYQSIT(0.054)HY(0.29)RPVS(0.328)AS(0.328)R 50.608 0.043495 9326500 34674 29013 25268 45414 32830 59790 88588 36831 48895 37612 TRUE FALSE 37328.6681 27572.25661 26110.42251 41703.53093 31540.92924 62065.35035 76956.28919 41644.93816 53147.79872 36384.72352 1.025943431 0.757797612 0.717620473 1.146182433 0.866872857 1.705807942 2.115071429 1.144572066 1.460717399 1 15.15104523 -6.753598341 24.98991081 1.533634387 0.898047161 0.470644012 0.306641347 149.872319 477652.5359 0.103821774 0.101993747 1.76E-07 6.753598341 -0.635587226 DSCIS(ph)PSEPETK ddPTM_A459_MK2206_30min_R1 3 DSCISPSEPETK 12 0 Q8TDB6 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 DS(0.001)CIS(0.735)PS(0.263)EPETK;DSCIS(0.92)PS(0.08)EPETK;DSCIS(0.977)PS(0.023)EPETK 162.31 0.00049023 20358600 10371.2 10503.8 10666 9441.3 8627.4 7989.5 9472.5 9213.3 9188 9497.6 TRUE FALSE 9489.074979 9820.000711 9942.021637 10168.47056 8283.752389 8441.858586 8840.606809 9132.749089 10143.12548 10674.23439 0.888970078 0.91997237 0.931403722 0.952618257 0.776051198 0.790863145 0.828219288 0.855588209 0.95024384 1 13.38184498 -6.231182358 24.89775036 0.853878358 0.923590671 0.132431689 0.065910899 1100.948551 905942.9538 0.019572201 0.025264799 5.87E-07 6.231182358 0.069712313 DSCIS(ph)PSEPETK ddPTM_A459_MK2206_30min_R2 1 DSCISPSEPETK 12 0 Q8TDB6 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 DSCIS(0.979)PS(0.021)EPETK 120.59 0.0039949 15473000 113770 118420 112680 114940 124970 98985 121530 105590 93874 121370 TRUE FALSE 122480.3187 112539.435 116436.695 105549.0343 120063.0499 102751.9435 105572.965 119390.9755 102038.9908 117409.7068 1.043187331 0.958519002 0.991712679 0.898980478 1.022599009 0.875157142 0.8991843 1.016874829 0.869084794 1 16.84119216 -1.522893343 0.795582429 0.940177483 24.91908122 0.213721783 0.055734074 738.5853391 2.618782647 0.018895828 31905.63677 0.029998992 1.522893343 23.97890374 DSDQVAQS(ph)DGEESPAAEEQLLGEHIK ddPTM_A459_MK2206_30min_R1 4 DSDQVAQSDGEESPAAEEQLLGEHIK 26 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H0Y8V7 D6REX3 SEC31A Protein transport protein Sec31A 1 DS(0.045)DQVAQS(0.953)DGEES(0.002)PAAEEQLLGEHIK;DS(0.004)DQVAQS(0.996)DGEESPAAEEQLLGEHIK;DS(0.001)DQVAQS(0.992)DGEES(0.007)PAAEEQLLGEHIK;DS(0.001)DQVAQS(0.953)DGEES(0.046)PAAEEQLLGEHIK 185.54 1.45E-27 66714000 21279.98 22466.3 21622.28 13317.08 17966.66 18998.21 26632.7 18910.08 28954.9 35540.9 TRUE FALSE 19470.00596 21003.73979 20154.61988 14342.76381 17251.00989 20073.87223 24856.08118 18744.75116 31964.86547 39943.97501 0.487432859 0.525829985 0.504572213 0.35907202 0.431880149 0.502550691 0.622273601 0.469276059 0.800242476 1 15.28569029 -8.443937745 2.308827815 1.001495537 0.484954777 0.87199551 0.065185651 0.097341872 1.109171444 0.067063686 0.018526173 3.60E-09 8.443937745 -0.516540759 down DSDQVAQS(ph)DGEESPAAEEQLLGEHIK ddPTM_A459_MK2206_30min_R2 5 DSDQVAQSDGEESPAAEEQLLGEHIK 26 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H0Y8V7 D6REX3 SEC31A Protein transport protein Sec31A 1 DS(0.003)DQVAQS(0.953)DGEES(0.044)PAAEEQLLGEHIK;DS(0.016)DQVAQS(0.981)DGEES(0.003)PAAEEQLLGEHIK;DS(0.008)DQVAQS(0.946)DGEES(0.046)PAAEEQLLGEHIK;DS(0.017)DQVAQS(0.976)DGEES(0.007)PAAEEQLLGEHIK;DS(0.005)DQVAQS(0.922)DGEES(0.073)PAAEEQLLGEHIK 129.88 4.08E-09 64922000 171176 137827 160319 156188 125505 110521.1 166286 129922.2 120643.1 169306 TRUE FALSE 184281.3662 130982.7116 165663.9554 143426.9408 120577.0431 114727.0579 144452.4485 146903.4776 131136.4188 163781.5591 1.125165539 0.79974029 1.011493335 0.875720939 0.736206468 0.700488251 0.881982375 0.896947608 0.800678779 1 17.3214134 -2.88764613 1.749015193 0.847342188 200 0.385164744 0.098455485 1107.126099 6.051921916 0.027626312 882344.9746 0.001295251 2.88764613 199.1526578 DSDQVAQS(ph)DGEESPAAEEQLLGEHIKEEK ddPTM_A459_MK2206_30min_R1 4 DSDQVAQSDGEESPAAEEQLLGEHIKEEK 29 1 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H0Y8V7 D6REX3 SEC31A Protein transport protein Sec31A 1 DS(0.002)DQVAQS(0.994)DGEES(0.004)PAAEEQLLGEHIKEEK;DS(0.012)DQVAQS(0.984)DGEES(0.004)PAAEEQLLGEHIKEEK;DS(0.088)DQVAQS(0.869)DGEES(0.043)PAAEEQLLGEHIKEEK;DS(0.05)DQVAQS(0.95)DGEESPAAEEQLLGEHIKEEK 113.39 1.01E-11 47501800 7586.3 8268.1 7661.9 5781.36 5776.1 5920.1 7438.9 7271.4 8133.6 7219.5 TRUE FALSE 6941.045348 7729.845187 7141.831575 6226.641349 5546.025706 6255.290946 6942.664554 7207.826916 8979.116826 8113.906164 0.855450532 0.952666327 0.880196471 0.767403668 0.683521056 0.770934593 0.855650092 0.888330081 1.106633062 1 12.9861809 -8.079733418 3.295620342 1.051687726 0.822376303 0.600343158 0.073543256 0.197662498 3.959752152 0.065272506 0.022305636 8.32E-09 8.079733418 -0.229311423 DSDQVAQS(ph)DGEESPAAEEQLLGEHIKEEK ddPTM_A459_MK2206_30min_R2 4 DSDQVAQSDGEESPAAEEQLLGEHIKEEK 29 1 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H0Y8V7 D6REX3 SEC31A Protein transport protein Sec31A 1 DS(0.006)DQVAQS(0.992)DGEES(0.002)PAAEEQLLGEHIKEEK;DSDQVAQS(0.968)DGEES(0.031)PAAEEQLLGEHIKEEK;DSDQVAQS(0.994)DGEES(0.006)PAAEEQLLGEHIKEEK;DS(0.082)DQVAQS(0.853)DGEES(0.065)PAAEEQLLGEHIKEEK 98.019 5.67E-08 45085600 106872 137805 118024 130741 132677 100552 135241 104686 103929 129805 TRUE FALSE 115054.2025 130961.8041 121958.8613 120059.0421 127467.4343 104378.5768 117483.6942 118368.8196 112968.5566 125569.4735 0.916259337 1.042943006 0.971246099 0.956116473 1.015114827 0.831241654 0.935607126 0.942656016 0.899649839 1 16.93812626 -6.715096072 24.99999965 0.919107019 0.98196359 0.250981862 0.050385448 162.8602767 87854.73017 0.015825549 0.015825503 1.93E-07 6.715096072 0.062856571 DSEAFCHR ddPTM_A459_MK2206_30min_R2 1 DSEAFCHR 8 0 C9JP16;O75718 C9JP16 CRTAP Cartilage-associated protein 0 87.696 0.045113 1545800 21723 29698 20448 26003 28591 30455 26844 30230 28828 23040 FALSE TRUE 23386.12958 28223.2405 21129.72611 23878.47172 27468.37368 31613.98637 23319.35055 34181.1648 31335.40733 22288.20669 1.049260262 1.266285839 0.94802271 1.071350067 1.232417398 1.418417678 1.046264102 1.5335987 1.405918734 1 14.44399292 -6.396525256 4.138733203 1.301703092 1.087918368 0.227043646 0.16983441 0.33149031 9.540578545 0.053259649 0.060485229 4.01E-07 6.396525256 -0.213784724 DSEGFNS(ph)PK ddPTM_A459_MK2206_30min_R2 1 DSEGFNSPK 9 0 O43303-2;O43303;I3L262 O43303-2 CCP110 Centriolar coiled-coil protein of 110 kDa 1 DSEGFNS(1)PK 102.05 0.01648 6731400 67601 57341 63952 55186 52420 36721 61718 52718 43696 66257 TRUE FALSE 72776.58454 54493.52932 66084.12776 50677.12727 50361.72741 38118.44339 53614.35246 59608.42361 47496.5991 64095.03952 1.135448002 0.850198857 1.031033419 0.790655995 0.78573518 0.594717527 0.836482088 0.930000575 0.741033931 1 15.96792509 DSENLAS(ph)PSEYPENGER ddPTM_A459_MK2206_30min_R1 1 DSENLASPSEYPENGER 17 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 DSENLAS(0.991)PS(0.009)EYPENGER 263.07 1.81E-40 196000000 1829.8 1509.9 1756.8 1340.2 1691.9 1753.2 1543.5 1488.4 1303.3 1039.9 TRUE FALSE 1674.165901 1411.605236 1637.553311 1443.422436 1624.50804 1852.464669 1440.535931 1475.387076 1438.782699 1168.730663 1.432465113 1.207810559 1.401138314 1.235034283 1.389976401 1.585022733 1.232564505 1.26238416 1.231064389 1 10.19072678 -8.610749544 1.002909703 1.003953395 1.356441188 0.509364256 0.106342874 0.559426591 1.208735123 0.103355672 0.034069559 2.45E-09 8.610749544 0.352487793 DSENLASPS(ph)EYPENGER ddPTM_A459_MK2206_30min_R1 3 DSENLASPSEYPENGER 17 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 DSENLAS(0.009)PS(0.99)EYPENGER;DS(0.001)ENLAS(0.007)PS(0.992)EYPENGER;DSENLAS(0.009)PS(0.991)EYPENGER 228.26 2.86E-16 187639500 10291.9 10708.7 10236.9 9050.6 10736.1 8531.5 8777.4 9273.2 7718.7 6213.5 TRUE FALSE 9416.51986 10011.56168 9542.04775 9747.67878 10308.4584 9014.546157 8191.875661 9192.12539 8521.086487 6983.27529 1.348438873 1.433648434 1.366414376 1.395860592 1.476163831 1.290876528 1.173070704 1.316305746 1.220213458 1 12.76968813 -8.594086238 0.37611951 0.972397353 1.422158247 0.77354086 0.063422855 0.787421971 0.290461532 0.122097817 0.061742805 2.55E-09 8.594086238 0.449760894 DSENLASPS(ph)EYPENGER ddPTM_A459_MK2206_30min_R2 4 DSENLASPSEYPENGER 17 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 DSENLAS(0.039)PS(0.961)EYPENGER;DSENLAS(0.006)PS(0.994)EYPENGER;DSENLAS(0.001)PS(0.999)EYPENGER;DSENLAS(0.016)PS(0.983)EY(0.001)PENGER 207.43 5.30E-09 604192000 281431 350807 342038 370379 340872 319044 321715 253904 298580 306725 TRUE FALSE 302977.5737 333386.4345 353441.3762 340117.8509 327487.6525 331185.443 279473.4341 287090.1246 324549.9487 296716.5884 1.021100894 1.123585427 1.19117498 1.146271777 1.103705237 1.116167602 0.941886787 0.967556705 1.093804531 1 18.17872606 -7.239766088 21.91782729 0.998108446 1.121398031 0.52529747 0.053988723 130.4260444 131897.4361 0.021342635 0.016504751 5.76E-08 7.239766088 0.123289585 DSENT(ph)PVKGGTVADLDEQDEETVTAGGK ddPTM_A459_MK2206_30min_R1 1 DSENTPVKGGTVADLDEQDEETVTAGGK 28 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 DS(0.074)ENT(0.614)PVKGGT(0.312)VADLDEQDEETVTAGGK 58.326 0.0080585 4001100 773.85 676.09 517.83 556.1 450.48 568.73 440.67 574.6 627.5 653.48 TRUE FALSE 708.0299939 632.0764181 482.6811424 598.9309184 432.5364277 600.9310011 411.2737083 569.5763328 692.7308705 734.4380359 0.964043199 0.860625931 0.657211526 0.815495507 0.588935222 0.81821879 0.559984217 0.775526736 0.943212139 1 9.520496966 -8.295335695 3.664362721 0.989869105 0.746128093 0.355335402 0.117670242 0.250763344 6.802926269 0.108810553 0.030442036 5.07E-09 8.295335695 -0.243741012 DSENT(ph)PVKGGTVADLDEQDEETVTAGGK ddPTM_A459_MK2206_30min_R2 2 DSENTPVKGGTVADLDEQDEETVTAGGK 28 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 DS(0.096)ENT(0.796)PVKGGT(0.108)VADLDEQDEETVTAGGK;DS(0.003)ENT(0.855)PVKGGT(0.142)VADLDEQDEETVTAGGK 95.209 1.96E-06 17253600 52827 45929 47080 44106 43752 31074.8 52916 40657 33051.9 53387 TRUE FALSE 56871.47574 43648.23265 48649.6237 40502.39871 42034.07664 32257.37329 45968.06564 45971.0095 35926.69452 51644.98656 1.10120032 0.845159144 0.942000898 0.784246476 0.8139043 0.624598348 0.890077986 0.890134988 0.695647282 1 15.65634069 -1.522892237 0.948329865 0.810981876 197.1439665 0.364846692 0.105971477 1230.538545 2.151699799 0.0330894 524052.1406 0.029999068 1.522892237 196.3329846 DSFDDRGPSLNPVLDYDHGS(ph)R ddPTM_A459_MK2206_30min_R1 1 DSFDDRGPSLNPVLDYDHGSR 21 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 DSFDDRGPSLNPVLDY(0.002)DHGS(0.998)R 79.586 0.00092503 3838500 6380.9 6652.8 6988.5 5940.9 7198.7 6287.4 6821.3 6565.6 5668.1 4581.2 TRUE FALSE 5838.170948 6219.701511 6514.140091 6398.469147 6911.960536 6643.387155 6366.263523 6508.197651 6257.319278 5148.753642 1.133899843 1.208001381 1.265187761 1.242721946 1.342453148 1.290290353 1.236466913 1.26403361 1.21530757 1 12.33000753 -11.05015227 7.74062301 0.999945564 1.248360079 0.66366861 0.052092378 5.20E-05 3.18E-06 0.05358701 0.012993923 8.91E-12 11.05015227 0.248414515 DSFDDRGPSLNPVLDYDHGS(ph)R ddPTM_A459_MK2206_30min_R2 1 DSFDDRGPSLNPVLDYDHGSR 21 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 DSFDDRGPSLNPVLDYDHGS(1)R 66.075 0.0041018 2017600 8897 11122 12559 12308 11721 12320 10822 6489.3 8239.6 8800.1 TRUE FALSE 9578.161161 10569.69765 12977.71079 11302.39703 11260.77465 12788.84623 9401.0584 7337.473791 8956.265514 8512.953458 1.125127866 1.24160172 1.524466316 1.327670483 1.322781183 1.502280765 1.104323951 0.861918702 1.052075001 1 13.05544403 -7.476515676 5.533977308 0.968996596 1.341865715 0.675521552 0.116782614 0.117539327 8.73895837 0.052492481 0.033911502 3.34E-08 7.476515676 0.372869119 DSFDDRGPSLNPVLDYDHGSR ddPTM_A459_MK2206_30min_R1 4 DSFDDRGPSLNPVLDYDHGSR 21 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 0 ;;; 131.31 3.99E-05 49206500 17126.4 6869.6 10085.3 6473.6 28259.1 27957.1 23592.7 15925.4 7452.7 7330.2 FALSE TRUE 15669.70975 6422.387791 9400.737935 6972.197794 27133.48021 29540.00684 22018.87403 15786.16591 8227.434835 8238.320516 1.902051482 0.779574888 1.141098834 0.846313005 3.293569382 3.585683124 2.67273821 1.916187392 0.998678653 1 13.00813454 -6.242205454 24.94673269 2.378758999 1.137699093 0.270841544 0.848348048 1023.731901 1327797.843 0.265225558 0.341876341 5.73E-07 6.242205454 -1.241059906 DSFDDRGPSLNPVLDYDHGSR ddPTM_A459_MK2206_30min_R2 4 DSFDDRGPSLNPVLDYDHGSR 21 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 0 ;;; 137.85 2.26E-05 34906600 34856.4 109558 67447 185847 180008 247441 161260 107054 163794 81751 FALSE TRUE 37525.03278 104117.509 69695.64932 170662.7056 172939.9815 256857.5406 140086.3683 121046.3254 178040.506 79083.47157 0.474499058 1.316552081 0.881292234 2.158007258 2.186803109 3.247929505 1.771373531 1.530614716 2.251298565 1 16.27108858 -5.76097925 24.99942261 2.090616793 0.933357983 0.441394041 0.578277492 11.12206518 604200.6746 0.161360962 0.258987577 1.73E-06 5.76097925 -1.157258811 DSFIENSSSNCTSGS(ph)SKPNS(ph)PSISPSILSNTEHK ddPTM_A459_MK2206_30min_R2 1 DSFIENSSSNCTSGSSKPNSPSISPSILSNTEHK 34 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 2 DSFIENS(0.004)S(0.005)S(0.005)NCT(0.01)S(0.02)GS(0.41)S(0.41)KPNS(0.526)PS(0.518)IS(0.08)PS(0.013)ILSNTEHK 70.083 5.47E-05 5608200 22240 28978 24683 24655 27843 22901 30309 23660 20034 29157 TRUE FALSE 23942.7115 27538.99466 25505.9189 22640.60763 26749.74392 23772.5136 26329.39189 26752.44324 21776.52111 28205.60948 0.848863469 0.976365878 0.904285331 0.802698756 0.948383829 0.842829283 0.933480693 0.948479531 0.772063483 1 14.78369449 DSFIENSSSNCTSGSSKPNS(ph)PS(ph)ISPSILSNTEHK ddPTM_A459_MK2206_30min_R2 1 DSFIENSSSNCTSGSSKPNSPSISPSILSNTEHK 34 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 2 DS(0.002)FIENS(0.034)S(0.078)S(0.058)NCT(0.033)S(0.018)GS(0.084)S(0.084)KPNS(0.611)PS(0.498)IS(0.316)PS(0.184)ILSNTEHK 75.794 6.56E-06 4377300 19092 24543 20485 20985 22912 23052 33351 21472 23399 25529 TRUE FALSE 20553.6982 23324.23031 21167.95968 19270.45837 22012.35976 23929.26001 28971.97364 24278.46412 25434.20272 24695.99082 0.83226862 0.944454121 0.857141543 0.780307156 0.891333331 0.968953228 1.173144817 0.983093341 1.029891974 1 14.59198923 -6.864174703 3.281989606 1.047567103 0.859480507 0.666276061 0.0618766 0.149553446 3.187762805 0.023331964 0.020538659 1.37E-07 6.864174703 -0.188086597 DSFS(ph)HSPGAVSSLK ddPTM_A459_MK2206_30min_R2 1 DSFSHSPGAVSSLK 14 0 Q9H6R7;Q9H6R7-3 Q9H6R7 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 1 DS(0.036)FS(0.925)HS(0.039)PGAVSSLK 110.92 0.0027091 28628000 91720 235200 165800 248860 276960 251130 262230 164410 207200 141820 TRUE FALSE 98742.15372 223520.31 171327.6892 228527.3419 266085.1588 260686.9281 227798.886 185898.9515 225221.8815 137192.425 0.719734735 1.629246731 1.248813039 1.665743148 1.939503284 1.900155407 1.660433409 1.355023439 1.64164954 1 17.0658413 -5.758401675 23.82770203 1.639276714 1.242262816 0.223688876 0.327361743 64.09019624 502700.6614 0.088652324 0.145341752 1.74E-06 5.758401675 -0.397013899 DSFSHS(ph)PGAVSSLK ddPTM_A459_MK2206_30min_R1 2 DSFSHSPGAVSSLK 14 0 Q9H6R7;Q9H6R7-3 Q9H6R7 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 1 DS(0.009)FS(0.05)HS(0.94)PGAVSSLK;DSFS(0.007)HS(0.993)PGAVSSLK 171.08 0.00014758 29271700 14895.9 7507.8 10092.5 7784 16133.1 15498.3 14024.2 11423.1 7330 7564.5 TRUE FALSE 13628.92548 7019.040855 9407.449219 8383.525029 15490.48446 16375.80035 13088.67121 11323.22904 8091.979731 8501.647369 1.603092306 0.825609503 1.106544274 0.986105947 1.822056808 1.926191436 1.539545295 1.331886463 0.951813146 1 13.0535267 -6.236442735 24.74746578 1.475605189 1.106872114 0.142833391 0.344715296 1164.773388 1153162.002 0.105623505 0.136302219 5.80E-07 6.236442735 -0.368733075 DSFSHS(ph)PGAVSSLK ddPTM_A459_MK2206_30min_R2 1 DSFSHSPGAVSSLK 14 0 Q9H6R7;Q9H6R7-3 Q9H6R7 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 1 DS(0.024)FS(0.143)HS(0.832)PGAVSSLK 80.459 0.022445 28999000 51182 111790 82063 136830 145550 140340 142480 93063 114440 80271 TRUE FALSE 55100.53327 106238.6712 84798.93946 125650.5513 139834.9757 145680.737 123772.2049 105226.6536 124393.7843 77651.76384 0.709585083 1.368142408 1.092041381 1.618128747 1.800795871 1.87607763 1.593939387 1.355109639 1.601944092 1 16.24473108 -5.759175728 24.66833628 1.590162895 1.087744746 0.397138657 0.274269389 48.89713427 532842.247 0.074433083 0.121343456 1.74E-06 5.759175728 -0.502418149 DSGFSSGNTDTS(ph)SER ddPTM_A459_MK2206_30min_R1 1 DSGFSSGNTDTSSER 15 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 DSGFSSGNTDT(0.152)S(0.539)S(0.309)ER 115.04 0.0024206 3020300 1797.3 1765.2 1260.6 1328.4 1636.2 1604.5 1662.1 1506.6 1533.9 1412 TRUE FALSE 1644.430197 1650.285159 1175.033984 1430.713598 1571.026689 1695.345403 1551.224342 1493.427955 1693.354394 1586.92922 1.036234116 1.039923607 0.740445112 0.901561065 0.989979055 1.068318222 0.977500648 0.941080381 1.067063592 1 10.63202207 -6.372925957 5.437731845 1.007238395 0.924322514 0.167102755 0.08539304 0.4508116 18.76221979 0.028659891 0.032555083 4.24E-07 6.372925957 -0.082915881 DSGFSSGNTDTSS(ph)ER ddPTM_A459_MK2206_30min_R2 1 DSGFSSGNTDTSSER 15 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 DSGFSSGNTDT(0.005)S(0.164)S(0.832)ER 161.94 1.16E-05 0 18358 18037 15745 17003 16635 15735 21141 16225 15644 16379 TRUE FALSE 19763.50259 17141.30881 16269.93044 15613.80051 15981.82632 16333.80645 18365.16131 18345.66321 17004.68684 15844.55457 1.247337216 1.081842265 1.026846818 0.985436381 1.008663654 1.030878235 1.159083471 1.157852884 1.07321962 1 13.95169948 -10.56856795 14.9559758 0.999976806 1.081296628 0.097560556 0.077148039 0 0 0.080635243 0.019556919 2.70E-11 10.56856795 0.081319822 DSGNWDTSGSELS(ph)EGELEKR ddPTM_A459_MK2206_30min_R1 1 DSGNWDTSGSELSEGELEKR 20 1 O75400-3;O75400;O75400-2 O75400-3;O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 DSGNWDTSGS(0.008)ELS(0.992)EGELEKR 117.11 0.00013559 5288300 1100.2 911 1026.4 852.81 707.78 636.45 848.04 746.48 700.93 728.31 TRUE FALSE 1006.622213 851.6937344 956.7308277 918.493574 679.5876239 672.485249 791.4687989 739.9536041 773.7941818 818.5385413 1.22977986 1.040505354 1.168828075 1.122114021 0.830245113 0.821568216 0.966929178 0.903993602 0.945336283 1 9.676906538 -6.245077763 21.27728388 0.904835442 1.13521562 0.730587942 0.068017633 60.27197298 78379.02783 0.01986115 0.025507795 5.69E-07 6.245077763 0.230380178 DSGNWDTSGSELS(ph)EGELEKR ddPTM_A459_MK2206_30min_R2 2 DSGNWDTSGSELSEGELEKR 20 1 O75400-3;O75400;O75400-2 O75400-3;O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 DSGNWDTSGS(0.006)ELS(0.994)EGELEKR;DSGNWDT(0.001)S(0.006)GS(0.024)ELS(0.969)EGELEKR 69.619 0.0061195 10405100 16829.6 25262 20716.4 22264 23069 13759 24645 18414.3 19505 20811.1 TRUE FALSE 18118.08712 24007.52581 21407.07444 20444.95998 22163.19515 14282.60839 21409.0819 20821.11224 21201.50964 20132.03551 0.899963002 1.192503649 1.063333831 1.015543608 1.100891916 0.709446811 1.063433545 1.034227871 1.053123 1 14.29720543 -4.462095528 14.22589204 1.022851253 0.000142932 0.093172345 0.11747416 972276.7477 6756395.8 0.029655309 27807189.27 3.45E-05 4.462095528 -1.022708321 DSGPLPT(ph)PPGVSLLGEPPKDYR ddPTM_A459_MK2206_30min_R2 1 DSGPLPTPPGVSLLGEPPKDYR 22 1 A0A087WZ13;E9PAU2;Q8IY67-2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 DS(0.029)GPLPT(0.971)PPGVSLLGEPPKDYR 89.028 0.00064826 3378400 39450 50876 38409 36895 36061 27187 34468 23828 26858 34304 TRUE FALSE 42470.32233 48349.57182 39689.53689 33880.56048 34645.06395 28221.62034 29942.3102 26942.40141 29194.06029 33184.66329 1.279817787 1.456985457 1.196020479 1.020970446 1.044008301 0.850441666 0.902293627 0.811893168 0.879745563 1 15.01822902 -5.795885704 1.148221909 0.884005978 1.393940944 0.851354822 0.076152932 0.177361972 0.459075677 0.027204279 0.070774939 1.60E-06 5.795885704 0.509934966 DSGRGDS(ph)VSDSGSDALR ddPTM_A459_MK2206_30min_R1 2 DSGRGDSVSDSGSDALR 17 1 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 DSGRGDS(0.966)VS(0.03)DS(0.004)GSDALR;DS(0.001)GRGDS(0.85)VS(0.149)DSGSDALR 225.69 1.83E-12 21470600 3402.9 3469.2 3517.6 2862.3 3435.7 3664 5409.6 6443.9 5678.6 6065.2 TRUE FALSE 3113.465486 3243.354449 3278.835113 3082.754842 3298.848794 3871.452514 5048.735454 6387.561662 6268.910791 6816.602766 0.456747385 0.475802179 0.481007215 0.452242114 0.483943235 0.567944568 0.740652731 0.937059395 0.919653236 1 12.7348372 -7.437464724 1.396695413 0.973685241 0.465828966 0.990343337 0.020972342 0.035653938 0.133437931 0.013573042 0.006838794 3.65E-08 7.437464724 -0.507856274 down DSGRLS(ph)PDLSVCGQPR ddPTM_A459_MK2206_30min_R1 1 DSGRLSPDLSVCGQPR 16 1 Q8TF76-2;Q8TF76 Q8TF76-2 GSG2 Serine/threonine-protein kinase haspin 1 DS(0.172)GRLS(0.828)PDLSVCGQPR 142.4 0.0018725 11276000 968.46 1127.7 1237 964.42 1483.7 1182.1 1061.2 1175.7 885.85 862.51 TRUE FALSE 886.0873914 1054.286525 1153.035886 1038.699796 1424.601087 1249.02948 990.4092843 1165.420979 977.9372775 969.3642504 0.914091262 1.087606155 1.189476387 1.071526823 1.469624124 1.288503759 1.02171014 1.202252898 1.008843969 1 9.920895068 -3.723409446 15.11170243 1.141433523 1.123561923 0 0.157076985 0 0 0.036845437 0 0.000189056 3.723409446 -0.0178716 DSGRLS(ph)PDLSVCGQPR ddPTM_A459_MK2206_30min_R2 2 DSGRLSPDLSVCGQPR 16 1 Q8TF76-2;Q8TF76 Q8TF76-2 GSG2 Serine/threonine-protein kinase haspin 1 DS(0.003)GRLS(0.997)PDLSVCGQPR;DS(0.044)GRLS(0.956)PDLSVCGQPR 119.37 0.00092862 33679000 35080 41784 38764 44502 38860 33408 44715 37217 35255 45913 TRUE FALSE 37765.75177 39709.06732 40056.37241 40866.04425 37334.16114 34679.36485 38843.86679 42081.38969 38321.41617 44414.86257 0.850295365 0.894049087 0.901868656 0.920098406 0.840578108 0.780805407 0.874569109 0.947461891 0.862806141 1 15.43875491 -9.273069498 0.778990431 1.001656638 0.871098577 0.424169649 0.043795787 3.230686034 2.514573415 0.063889122 0.016424054 5.33E-10 9.273069498 -0.130558061 DSGS(ph)DQDLDGAGVR ddPTM_A459_MK2206_30min_R2 2 DSGSDQDLDGAGVR 14 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 DS(0.003)GS(0.997)DQDLDGAGVR;DSGS(1)DQDLDGAGVR 191.15 7.51E-05 26380000 78258 93849 75857 66199 76319 76245 81984 66463 64028 81366 TRUE FALSE 84249.49265 89188.59513 78386.03452 60790.32994 73322.33259 79146.5569 71219.40232 75149.9423 69597.0397 78711.03408 1.070364449 1.13311426 0.995870978 0.772322847 0.931538169 1.005533186 0.904821073 0.954757401 0.884209444 1 16.26427827 -5.518650816 24.99472414 0.920168844 1.0924277 0.558092897 0.06365137 120.6501049 713259.5155 0.017317022 0.030959499 3.03E-06 5.518650816 0.172258856 DSGS(ph)ISLQETR ddPTM_A459_MK2206_30min_R1 2 DSGSISLQETR 11 0 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 DSGS(0.999)IS(0.001)LQETR;DS(0.013)GS(0.986)IS(0.001)LQETR 147.7 0.00066196 73981000 5499.2 4028.8 3061.2 2687.4 9160.8 9842.5 7447.3 5112.3 2683.5 3224.8 TRUE FALSE 5031.464163 3766.524388 2853.414273 2894.384014 8795.905938 10399.77384 6950.504205 5067.6037 2962.459428 3624.31257 1.388253376 1.039238287 0.787298065 0.798602206 2.426917041 2.86944728 1.917744144 1.398224795 0.817385193 1 11.82349167 -2.432789625 5.167047663 1.487963051 1.10867228 0 0.69628488 0 0 0.179194838 0 0.003691564 2.432789625 -0.379290771 DSGS(ph)ISLQETR ddPTM_A459_MK2206_30min_R2 2 DSGSISLQETR 11 0 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 DSGS(1)ISLQETR;DSGS(0.995)IS(0.001)LQET(0.004)R 162.67 0.00058807 69540000 128142 163191 164157 182248 166891 212582 163769 104367 166402 165862 TRUE FALSE 137952.65 155087.1722 169629.9124 167357.7554 160338.0208 220671.957 142265.9336 118008.1252 180875.3452 160449.9365 0.859786255 0.966576713 1.057213958 1.043052799 0.999302488 1.375332155 0.886668681 0.73548253 1.127300821 1 17.29176369 DSGS(ph)QEVLSELR ddPTM_A459_MK2206_30min_R1 1 DSGSQEVLSELR 12 0 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 DS(0.002)GS(0.998)QEVLS(0.001)ELR 153.41 0.00046963 14056000 1885.9 1734.1 1778.7 1335.2 1658.8 1527.7 1812.9 1593.7 1758 1500.9 TRUE FALSE 1725.494302 1621.209775 1657.9668 1438.037335 1592.726483 1614.197054 1691.964749 1579.766449 1940.750391 1686.842823 1.022913503 0.961091189 0.982881616 0.85250227 0.944205626 0.956933884 1.003036398 0.936522613 1.150522363 1 10.72010984 -8.243676323 24.79181125 1.075261192 0.956030405 0.424942328 0.054769772 580.6991974 810482.1683 0.036601258 0.013759956 5.71E-09 8.243676323 -0.119230787 DSGS(ph)QEVLSELR ddPTM_A459_MK2206_30min_R2 4 DSGSQEVLSELR 12 0 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 DS(0.003)GS(0.997)QEVLSELR;DSGS(1)QEVLSELR;DS(0.001)GS(0.999)QEVLSELR;DS(0.388)GS(0.612)QEVLSELR 172.09 0.00023898 26745900 38070.9 39912.8 32640.1 45269 44291 45088.3 45899.8 26355.7 38206.3 39748.3 TRUE FALSE 40985.63738 37930.78839 33728.30464 41570.37789 42551.9128 46804.16685 39873.10112 29800.48048 41529.41491 38451.31623 1.065909867 0.986462678 0.877169053 1.081117162 1.106643854 1.217231852 1.036976235 0.775018476 1.080051842 1 15.23074536 -11.70356624 4.483708244 0.855558588 1.022363599 0.003617437 0.117267413 0.426860173 0.017201911 0.286247128 0.029398573 1.98E-12 11.70356624 0.166805011 DSGSDQDLDGAGVRAS(ph)DLEDEESAAR ddPTM_A459_MK2206_30min_R2 2 DSGSDQDLDGAGVRASDLEDEESAAR 26 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 DSGSDQDLDGAGVRAS(0.992)DLEDEES(0.008)AAR;DSGSDQDLDGAGVRAS(0.976)DLEDEES(0.024)AAR 78.757 8.76E-05 69201000 57694 69324 64164 83381 72934 79329 68638 59847 67585 69385 TRUE FALSE 62111.097 65881.47097 66303.19574 76568.50558 70070.2447 82347.92068 59625.74815 67669.20839 73463.42113 67120.97313 0.925360496 0.981533311 0.987816366 1.140753806 1.043939643 1.226858266 0.888332594 1.008167868 1.09449279 1 16.03447601 -5.540372254 24.05782363 1.057827084 0.961253853 0.203196338 0.085570788 242.1914296 333070.2148 0.023543484 0.040791931 2.88E-06 5.540372254 -0.096573231 DSGSDTASAIIPSTTPSVDS(ph)DDESVVKDK ddPTM_A459_MK2206_30min_R2 1 DSGSDTASAIIPSTTPSVDSDDESVVKDK 29 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 DSGSDTASAIIPSTT(0.001)PS(0.008)VDS(0.984)DDES(0.008)VVKDK 76.55 0.0037103 0 15368 24256 17074 21032 20373 13620 22948 16249 17611 24352 TRUE FALSE 16544.5859 23051.48231 17643.23864 19313.61832 19573.05365 14138.31864 19934.90003 18372.80009 19142.77295 23557.39623 0.702309616 0.9785242 0.74894689 0.819853694 0.830866597 0.600164742 0.8462268 0.779916418 0.812601391 1 14.52389247 -8.815787721 3.237126056 0.999999694 0.791552543 0.313858128 0.093192473 4.211567224 45.37165076 0.087242161 0.023075708 1.53E-09 8.815787721 -0.208447151 DSHGVAQVR ddPTM_A459_MK2206_30min_R2 1 DSHGVAQVR 9 0 P62277;J3KMX5;E9PS50 P62277 RPS13 40S ribosomal protein S13 0 143.37 0.0028646 16411000 57916 110780 88093 115780 110650 102030 95664 83766 71120 116220 FALSE TRUE 62350.09349 105278.8263 91029.97665 106320.4036 106305.325 105912.8231 83103.20189 94714.50381 77305.88904 112427.7509 0.554579212 0.936413167 0.809675333 0.945677582 0.945543464 0.942052316 0.739169833 0.842447732 0.687605048 1 16.77863866 -9.99713844 0.014456311 1.782210766 4.43E-06 0.088867366 0.12926709 7520.392511 25.76091078 1697.411547 1480.496882 1.01E-10 9.99713844 -1.782206337 DSHS(ph)PDLQLPTPEVIPSSGSK ddPTM_A459_MK2206_30min_R1 1 DSHSPDLQLPTPEVIPSSGSK 21 0 H3BQK9;H3BPE1;H0Y4F5;H0Y6T5 H3BQK9 MACF1 1 DS(0.188)HS(0.812)PDLQLPTPEVIPSSGSK 124.88 4.68E-05 3593000 2633.5 2439.4 2770 2046.9 2409.3 2441.6 2753 2710 3170.8 3142.7 TRUE FALSE 2409.506996 2280.594617 2581.980118 2204.552593 2313.332479 2579.841282 2569.352393 2686.306756 3500.416007 3532.041402 0.682185377 0.645687396 0.731016379 0.624158197 0.654956218 0.730410827 0.727441188 0.760553586 0.991046143 1 11.78628654 -8.161073006 1.854605577 1.016604778 0.680313604 0.919732244 0.036070417 0.089273062 0.548942778 0.03373727 0.010308019 6.90E-09 8.161073006 -0.336291174 DSIS(ph)SDSETSEPLSCR ddPTM_A459_MK2206_30min_R1 1 DSISSDSETSEPLSCR 16 0 O75164 O75164 KDM4A Lysine-specific demethylase 4A 1 DS(0.011)IS(0.723)S(0.241)DS(0.006)ET(0.004)S(0.012)EPLS(0.003)CR 113.43 0.0024898 0 1270.1 1219 1367.5 1039.9 1073.6 1024.4 1131.9 1328.5 846.18 928.47 TRUE FALSE 1162.071325 1139.642878 1274.67791 1119.993278 1030.836239 1082.400643 1056.393016 1316.885065 934.1434391 1043.495873 1.11363289 1.092139325 1.221545713 1.073308776 0.987868055 1.037283108 1.012359554 1.261993553 0.895205686 1 10.02720918 -1.522879465 0.123641789 0.97617814 1.500706623 0.146302764 0.096385143 202.2357411 1.715699324 0.611559477 18.33926153 0.02999995 1.522879465 0.524528483 DSIS(ph)SDSETSEPLSCR ddPTM_A459_MK2206_30min_R2 1 DSISSDSETSEPLSCR 16 0 O75164 O75164 KDM4A Lysine-specific demethylase 4A 1 DSIS(0.981)S(0.019)DSETSEPLSCR 288.06 1.70E-74 18817000 26031 29731 28082 40004 33130 24292 35459 22151 24012 29360 TRUE FALSE 28023.95337 28254.60177 29018.23986 36735.54523 31829.14974 25216.44908 30803.19071 25046.21176 26100.52036 28401.9856 0.986689937 0.994810791 1.021697577 1.293414684 1.120666357 0.887841063 1.084543564 0.88184721 0.918968157 1 14.79370417 -6.752342648 24.99620292 0.955374419 1.086764516 0.300294029 0.0982478 271.0476835 744789.4667 0.03513138 0.03465369 1.77E-07 6.752342648 0.131390097 DSISAVSSEKVS(ph)PSK ddPTM_A459_MK2206_30min_R1 3 DSISAVSSEKVSPSK 15 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DSISAVS(0.014)S(0.076)EKVS(0.873)PS(0.038)K;DSIS(0.002)AVS(0.068)S(0.149)EKVS(0.723)PS(0.058)K;DSISAVS(0.016)S(0.051)EKVS(0.823)PS(0.11)K 193.31 0.00014712 122398000 10549.1 13792.4 13252.4 9882.1 7027.6 8115.8 11501.6 9199.6 16909.2 18833.1 TRUE FALSE 9651.843649 12894.51225 12352.86401 10643.22105 6747.675811 8575.309582 10734.34925 9119.168867 18666.97185 21166.28661 0.456000801 0.609200494 0.583610354 0.50283837 0.318793558 0.405140011 0.507143716 0.430834611 0.881920017 1 14.36948057 -8.354403222 3.949396174 0.990289427 0.47852538 0.841337232 0.081147102 0.092296582 2.456858294 0.08640846 0.023016381 4.42E-09 8.354403222 -0.511764047 down DSISAVSSEKVS(ph)PSK ddPTM_A459_MK2206_30min_R2 3 DSISAVSSEKVSPSK 15 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DS(0.001)IS(0.085)AVS(0.062)S(0.247)EKVS(0.47)PS(0.134)K;DSISAVS(0.001)S(0.007)EKVS(0.947)PS(0.045)K;DSISAVS(0.012)S(0.085)EKVS(0.902)PS(0.001)K 130.47 0.0037693 55026800 233881 168349 194142 159567 160532 97232 220385 179842 119684 246713 TRUE FALSE 251787.1092 159989.0335 200614.5974 146529.8657 154228.7071 100932.2319 191448.1848 203347.9669 130093.898 238662.775 1.054991124 0.670356043 0.840577662 0.613961962 0.646220204 0.422907309 0.802170279 0.852030514 0.545095053 1 17.86461404 -10.38984971 22.5404814 1 0.711563365 0.19969962 0.170016402 0 0 0.16374077 0.03971297 4.08E-11 10.38984971 -0.288436635 DSISAVSSEKVSPS(ph)K ddPTM_A459_MK2206_30min_R2 1 DSISAVSSEKVSPSK 15 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DSISAVSSEKVS(0.304)PS(0.695)K 168.16 0.0003224 16313000 53588 28765 44256 28589 33861 21824 48155 38874 23732 45129 TRUE FALSE 57690.73848 27336.57193 45731.47295 26253.18725 32531.447 22654.52761 41832.19066 43954.96527 25796.16646 43656.44443 1.321471303 0.626174951 1.047530864 0.601358805 0.745169412 0.518927455 0.958213414 1.006837956 0.590890229 1 15.41390702 -4.750709941 24.99798838 0.786354602 1.321472434 0.41314352 0.190606045 458.7176121 1068673.485 0.046024339 0.658271225 1.78E-05 4.750709941 0.535117831 DSISS(ph)DSETSEPLSCR ddPTM_A459_MK2206_30min_R2 1 DSISSDSETSEPLSCR 16 0 O75164 O75164 KDM4A Lysine-specific demethylase 4A 1 DSIS(0.189)S(0.811)DSETSEPLSCR 171.81 7.34E-06 19395000 58127 65470 62470 67024 75277 72893 78216 61899 68425 68912 TRUE FALSE 62577.24781 62218.855 64552.71862 61547.9248 72321.24674 75666.99419 67946.14525 69989.41183 74376.48282 66663.40708 0.938704614 0.933328459 0.968338125 0.923264014 1.084871745 1.13506041 1.019242013 1.049892511 1.115701793 1 16.02460743 -6.262822398 24.99732918 1.070925021 0.942326584 0.711004585 0.039485119 67.01160799 1211201.178 0.011946499 0.01428733 5.46E-07 6.262822398 -0.128598437 DSITPDIATKPGQPLFLDSIS(ph)PK ddPTM_A459_MK2206_30min_R1 2 DSITPDIATKPGQPLFLDSISPK 23 1 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 DSITPDIATKPGQPLFLDS(0.26)IS(0.74)PK;DSITPDIATKPGQPLFLDS(0.225)IS(0.775)PK 94.275 4.76E-05 58561000 6751.5 8837.7 9088.9 7983.9 5058 4563.1 5087.2 6342.4 7488 6426.1 TRUE FALSE 6177.249471 8262.364124 8471.970791 8598.821361 4856.52915 4821.458779 4747.84217 6286.949065 8266.404396 7222.213783 0.855312465 1.144020985 1.17304348 1.190607426 0.672443283 0.66758738 0.657394299 0.870501657 1.144580408 1 12.81822541 -6.255472382 24.95507867 0.81165022 1.100429828 0.345630393 0.170028437 523.4445943 2189139.506 0.053547776 0.067290378 5.55E-07 6.255472382 0.288779608 DSITPDIATKPGQPLFLDSIS(ph)PK ddPTM_A459_MK2206_30min_R2 2 DSITPDIATKPGQPLFLDSISPK 23 1 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 DSITPDIATKPGQPLFLDS(0.238)IS(0.762)PK;DSITPDIATKPGQPLFLDS(0.194)IS(0.806)PK 100.59 2.55E-05 30041000 90684 71682 69621 57750 61196 44940 85461 59061 48289 81194 TRUE FALSE 97626.83676 68122.37612 71942.12939 53031.64027 58793.13755 46650.22319 74239.86804 66780.47549 52489.08993 78544.64643 1.242947052 0.867307693 0.915939312 0.675178293 0.748531443 0.593932563 0.94519323 0.850223135 0.668270752 1 16.26122532 -4.06483159 1.235724693 0.78092058 2.944797181 0.529848746 0.124571573 5.546243839 2.020906815 0.036138856 23.58238584 8.61E-05 4.06483159 2.163876601 DSLGDFIEHYAQLGPS(ph)SPEQLAAGAEEGGGPR ddPTM_A459_MK2206_30min_R1 2 DSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPR 32 0 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 DSLGDFIEHYAQLGPS(0.866)S(0.134)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.988)S(0.012)PEQLAAGAEEGGGPR 165.69 1.63E-28 54243900 6544.4 6871.3 7394.5 5828.1 7940.1 7898.6 7846.1 6607.2 6800 6018.6 TRUE FALSE 5987.764414 6423.977121 6892.581942 6276.981272 7623.829004 8345.811906 7322.700985 6549.433947 7506.884334 6764.229606 0.885210107 0.949698265 1.01897516 0.927966914 1.127080162 1.233815585 1.082562452 0.968245362 1.109791472 1 12.72370992 -6.258585619 24.96463659 1.092455427 0.95101605 0.464361612 0.074187592 248.0105973 2169589.247 0.023930052 0.02955355 5.51E-07 6.258585619 -0.141439377 DSLGDFIEHYAQLGPSS(ph)PEQLAAGAEEGGGPR ddPTM_A459_MK2206_30min_R1 4 DSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPR 32 0 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 DSLGDFIEHYAQLGPS(0.371)S(0.629)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.261)S(0.739)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.322)S(0.678)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.039)S(0.961)PEQLAAGAEEGGGPR 128.14 6.55E-19 59967000 11235.4 12032.2 12100.1 9966.9 12222.5 11716.1 12556.4 11666.8 10086.4 10146.8 TRUE FALSE 10279.77023 11248.90159 11278.77892 10734.55236 11735.65194 12379.45546 11718.78547 11564.7984 11134.91737 11403.86219 0.901428837 0.986411569 0.9890315 0.941308496 1.029094508 1.085549374 1.027615493 1.01411243 0.97641634 1 13.47723489 -2.962744408 0.592930489 1.019947228 1.40E-12 0.466182435 0.034970054 26.49705063 1.225929134 0.017699215 29.36616937 0.001089571 2.962744408 -1.019947228 DSLGT(ph)YSSR ddPTM_A459_MK2206_30min_R1 1 DSLGTYSSR 9 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DS(0.043)LGT(0.936)YS(0.021)SR 139.43 0.0055667 11601000 1874.4 2436.4 2188.7 1824 2181.1 2291.1 2644 2216.2 2366.5 2272 TRUE FALSE 1714.972437 2277.789917 2040.137142 1964.484796 2094.222168 2420.820102 2467.623584 2196.823997 2612.506144 2553.472513 0.671623614 0.8920362 0.798965774 0.769338533 0.820146744 0.94805019 0.966379537 0.860328038 1.023118961 1 11.31824481 -6.717457322 4.007307002 0.952488604 0.792335163 0.636541376 0.064107124 0.151580217 5.109319508 0.021467193 0.020681497 1.92E-07 6.717457322 -0.160153441 DSLIDSLT(ph) ddPTM_A459_MK2206_30min_R1 1 DSLIDSLT 8 0 P56537;P56537-2 P56537 EIF6 Eukaryotic translation initiation factor 6 1 DSLIDS(0.09)LT(0.91) 111.28 0.0048854 3276600 5502.3 4217.2 4383.4 4002.8 4848.2 3899.4 4406.1 4250.8 3726.1 3694.8 TRUE FALSE 5034.300491 3942.659513 4085.867021 4311.09635 4655.085928 4120.180658 4112.177108 4213.635704 4113.441429 4152.539718 1.212342526 0.949457388 0.983944116 1.03818305 1.121021409 0.992207405 0.990280018 1.01471292 0.990584488 1 12.01977825 DSLIFLVDASK ddPTM_A459_MK2206_30min_R1 1 DSLIFLVDASK 11 0 P12956;P12956-2 P12956 XRCC6 X-ray repair cross-complementing protein 6 0 139.86 0.015706 3569700 3457.7 3286.4 3724.9 3906.6 3446.9 3651.8 3362.2 2915.3 2840.5 3302.8 FALSE TRUE 3163.604458 3072.454763 3472.064166 4207.487009 3309.602674 3858.56176 3137.913773 2889.811839 3135.78014 3711.975799 0.852269689 0.827714115 0.935368212 1.133489882 0.891601361 1.03949001 0.845348661 0.77851042 0.844773864 1 11.85797159 -7.315617971 24.68497179 0.848700659 0.946726119 0.123933226 0.098784755 509.7910083 232269.9509 0.042816773 0.028867057 4.83E-08 7.315617971 0.09802546 DSLIT(ph)PHVSR ddPTM_A459_MK2206_30min_R2 2 DSLITPHVSR 10 0 P49792;H7BZ48;Q99666;O14715;J3KQ37 P49792;Q99666 RANBP2;RGPD6;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 DSLIT(0.998)PHVS(0.001)R;DSLIT(0.981)PHVS(0.019)R 92.039 0.036857 9557100 28665.2 70486 46709 121795 110790 151677 115653 56142 98701 65889 TRUE FALSE 30859.82975 66985.76774 48266.25475 111843.9589 106439.8279 157449.1745 100467.6222 63479.95216 107285.8346 63739.04733 0.484158943 1.050937699 0.757247822 1.754716513 1.669931265 2.470215372 1.576233508 0.995935064 1.683204238 1 15.95988984 -5.757807805 24.99920794 1.631792666 0.792796893 0.457946669 0.411324975 86.44136992 595037.8834 0.117761827 0.194183099 1.75E-06 5.757807805 -0.838995773 DSLITPHVS(ph)R ddPTM_A459_MK2206_30min_R1 2 DSLITPHVSR 10 0 P49792;H7BZ48;Q99666;O14715;J3KQ37 P49792;Q99666 RANBP2;RGPD6;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 DSLITPHVS(1)R;DSLITPHVS(1)R 93.839 0.024656 37488000 4317.5 3396.3 4187 2728.4 5830.4 4955.5 6518 4869.8 4229.2 3853.6 TRUE FALSE 3950.273953 3175.200253 3902.798106 2938.541841 5598.162822 5236.076128 6083.196113 4827.223852 4668.840474 4331.013061 0.912090058 0.733131073 0.901128223 0.678488335 1.292575835 1.208972601 1.404566559 1.11457153 1.078001938 1 12.08048881 -6.264798117 24.99822431 1.201208811 0.80776945 0.68646675 0.124425365 161.9918305 1205662.343 0.037568509 0.044359198 5.44E-07 6.264798117 -0.393439361 DSLITPHVS(ph)R ddPTM_A459_MK2206_30min_R2 2 DSLITPHVSR 10 0 P49792;H7BZ48;Q99666;O14715;J3KQ37 P49792;Q99666 RANBP2;RGPD6;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 DSLIT(0.002)PHVS(0.998)R;DSLIT(0.003)PHVS(0.997)R 92.151 0.017879 21529000 180497 194510 174147 232977 231289 224561 229688 172797 164466 209776 TRUE FALSE 194315.9891 184850.9162 179952.9741 213942.0338 222207.4317 233106.8262 199529.6897 195382.1612 178770.9554 202931.0263 0.957546969 0.910905147 0.886769152 1.054259852 1.094989937 1.148699785 0.983238952 0.962800833 0.880944421 1 17.63062993 -2.697585623 21.424639 0.991170244 0.412725415 0 0.084345959 0 0 0.021648724 0 0.002006385 2.697585623 -0.578444829 DSLLDGHFVLATLSDTDSHSQDLGS(ph)PER ddPTM_A459_MK2206_30min_R1 2 DSLLDGHFVLATLSDTDSHSQDLGSPER 28 0 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 1 DSLLDGHFVLATLS(0.023)DT(0.228)DS(0.001)HS(0.049)QDLGS(0.699)PER;DSLLDGHFVLATLSDT(0.001)DS(0.015)HS(0.252)QDLGS(0.732)PER 122.76 2.02E-12 12388800 2924.8 2366.6 2578.2 2051.18 3388.6 2656.02 3366.5 2951.87 2141.42 2320.85 TRUE FALSE 2676.030401 2212.53391 2403.198967 2209.162239 3253.624887 2806.401557 3141.926928 2926.062112 2364.028272 2608.37442 1.025937987 0.848242451 0.921339724 0.846949818 1.247376474 1.075919751 1.20455365 1.12179528 0.906322441 1 11.34893526 -6.245597094 24.99616882 1.103508579 0.906928002 0.43333683 0.101495073 730.6562495 1152839.226 0.029470298 0.037914175 5.68E-07 6.245597094 -0.196580577 DSLLDGHFVLATLSDTDSHSQDLGS(ph)PER ddPTM_A459_MK2206_30min_R2 1 DSLLDGHFVLATLSDTDSHSQDLGSPER 28 0 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 1 DSLLDGHFVLATLSDTDS(0.001)HS(0.041)QDLGS(0.958)PER 87.457 1.33E-05 3616000 15262 20090 16840 24017 24184 24081 25844 20565 19781 22174 TRUE FALSE 16430.47045 19092.35981 17401.4372 22054.73427 23234.41465 24997.41933 22450.65176 23252.91611 21501.51562 21450.4642 0.765972722 0.890067443 0.811238257 1.02817049 1.083166053 1.165355635 1.046627782 1.084028574 1.002379968 1 14.38872125 -5.8271297 4.343983005 1.070581392 0.828002028 0.807015638 0.052947109 0.084355066 3.118104612 0.015009785 0.023535922 1.49E-06 5.8271297 -0.242579364 DSLLQDGEFSMDLR ddPTM_A459_MK2206_30min_R1 7 DSLLQDGEFSMDLR 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 ;;;;;; 305.3 1.97E-79 528680900 13221.4 13569.2 12830.3 12061.7 13428 11162.9 12494 12219.9 10811.94 11062.1 FALSE TRUE 12096.8505 12685.84261 11959.41498 12990.69422 12893.13433 11794.93375 11660.54806 12113.0627 11935.87985 12432.55646 0.972997833 1.020372813 0.961943348 1.044893242 1.037046111 0.948713467 0.937904291 0.974301845 0.960050324 1 13.60183536 -6.774752577 24.99840914 0.960944739 1.007720527 0.363782949 0.028439572 246.4454394 462751.9319 0.010063741 0.008925469 1.68E-07 6.774752577 0.046775788 DSLLQDGEFSMDLR ddPTM_A459_MK2206_30min_R2 4 DSLLQDGEFSMDLR 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 ;;; 204.32 0.00034778 16629600 40118.7 49380.7 47577.4 48531.7 54193.9 53694.4 49558.5 39519.6 49130.4 44063.9 FALSE TRUE 43190.21852 46928.52624 49163.60677 44566.50486 52065.97518 55737.77802 43051.40942 44684.94741 53403.67338 42626.09855 1.013234145 1.100934119 1.153368674 1.045521556 1.221457674 1.307597456 1.00997771 1.048300195 1.252839814 1 15.3794494 -2.313877217 18.58833286 1.120747282 0.311811291 0 0.106431712 0 0 0.024347726 0 0.004854257 2.313877217 -0.808935991 DSLS(ph)DDGVDLK ddPTM_A459_MK2206_30min_R2 2 DSLSDDGVDLK 11 0 P07948;P07948-2;E5RJ37 P07948 LYN Tyrosine-protein kinase Lyn 1 DS(0.023)LS(0.977)DDGVDLK;DS(0.001)LS(0.999)DDGVDLK 109 0.0096495 1745600 39140 26214 32171 26939 24071 26705 38694 27196 30311 33575 TRUE FALSE 42136.58849 24912.25088 33243.56508 24737.99753 23125.85159 27721.27749 33613.43132 30750.61058 32947.39599 32479.4505 1.297330707 0.767015774 1.023526093 0.761650741 0.712014866 0.853502047 1.034913793 0.946771269 1.014407432 1 14.9872396 -9.410685102 12.03877295 0.999986792 0.921552728 0.008494736 0.164834367 0 0 0.157583358 0.038219578 3.88E-10 9.410685102 -0.078434064 DSLS(ph)PVLHPSDLILTR ddPTM_A459_MK2206_30min_R1 4 DSLSPVLHPSDLILTR 16 0 Q9HCN4-3;Q9HCN4-2;Q9HCN4-4;Q9HCN4;Q9HCN4-5 Q9HCN4-3 GPN1 GPN-loop GTPase 1 1 DS(0.051)LS(0.871)PVLHPS(0.078)DLILTR;DS(0.1)LS(0.898)PVLHPSDLILT(0.002)R;DS(0.003)LS(0.997)PVLHPSDLILTR;DS(0.002)LS(0.998)PVLHPSDLILTR 178.01 1.13E-06 30905200 10414.93 4130.63 5755.22 4205.99 13672.2 13395.9 11030.4 8469.49 4812.82 3912.6 TRUE FALSE 9529.085513 3861.725236 5364.571701 4529.936079 13127.60732 14154.36428 10294.58214 8395.442142 5313.129862 4397.322427 2.16701997 0.878199245 1.219963237 1.030157819 2.98536383 3.218859776 2.341102413 1.909216866 1.208264791 1 12.1024096 -4.468265128 22.36555194 1.827154915 7.826630443 0.015949108 0.80751345 2335.957439 975005.9503 0.215873721 13077.02044 3.40E-05 4.468265128 5.999475528 DSLS(ph)PVLHPSDLILTR ddPTM_A459_MK2206_30min_R2 3 DSLSPVLHPSDLILTR 16 0 Q9HCN4-3;Q9HCN4-2;Q9HCN4-4;Q9HCN4;Q9HCN4-5 Q9HCN4-3 GPN1 GPN-loop GTPase 1 1 DS(0.253)LS(0.747)PVLHPSDLILTR;DS(0.087)LS(0.913)PVLHPSDLILTR;DS(0.312)LS(0.688)PVLHPSDLILTR 75.608 0.02024 34890400 14641.3 40959.7 25048.2 57773 57921 67640 55013 37272.9 50819.2 29405.5 TRUE FALSE 15762.24919 38925.70086 25883.29449 53052.76109 55646.73051 70214.0876 47789.72702 42144.59601 55239.36216 28446.00094 0.554111252 1.368406791 0.909909781 1.865034076 1.956223324 2.468328949 1.680015659 1.481564881 1.941902564 1 14.79593823 -5.762900624 24.99984796 1.823555958 0.986568896 0.467647407 0.400444996 32.68410001 559196.8772 0.109867026 0.173410619 1.73E-06 5.762900624 -0.836987063 DSLYVDGDCTMDIR ddPTM_A459_MK2206_30min_R1 1 DSLYVDGDCTMDIR 14 0 C9J712;C9J0J7;C9JQ45;C9J2N0;G5E9Q6;P35080-2;P35080 C9J712 PFN2 Profilin;Profilin-2 0 266.26 5.82E-35 14708000 1843 2037.1 2225 1743.6 2203.2 1777.8 2480.2 1866.7 1516 1799.9 FALSE TRUE 1686.243172 1904.48442 2073.973199 1877.892374 2115.441879 1878.4575 2314.750383 1850.379639 1673.593625 2022.885201 0.833583226 0.941469352 1.025255016 0.928323749 1.045754785 0.928603116 1.144281634 0.91472301 0.827330006 1 10.98219873 -4.811598305 3.388459573 0.979036182 0.819657171 0.216249245 0.081680578 0.436455319 8.19542234 0.020629599 0.173799913 1.54E-05 4.811598305 -0.159379012 DSNAPKS(ph)PLTGYVR ddPTM_A459_MK2206_30min_R1 2 DSNAPKSPLTGYVR 14 1 H0YNS8;H0YKM5;Q9NP66 H0YNS8 HMG20A High mobility group protein 20A 1 DSNAPKS(0.912)PLT(0.088)GYVR;DS(0.002)NAPKS(0.971)PLT(0.027)GYVR 118.52 0.011138 26224000 5092.3 5235 6176.4 5859.2 6259.8 4656.3 4305.3 5679.8 3080 1859.61 TRUE FALSE 4659.173144 4894.200548 5757.163176 6310.476599 6010.458911 4919.935682 4018.101292 5630.142107 3400.177022 2089.992526 2.229277419 2.341731125 2.75463338 3.019377591 2.875827945 2.35404463 1.922543379 2.693857532 1.626884776 1 11.02928207 -8.59685953 0.78296938 0.981063609 2.608718601 0.694961239 0.326878219 0.461718432 0.624170693 0.340355859 0.125141536 2.53E-09 8.59685953 1.627654992 DSNNLCLHFNPR ddPTM_A459_MK2206_30min_R1 2 DSNNLCLHFNPR 12 0 P09382 P09382 LGALS1 Galectin-1 0 ; 160.86 0.00066974 67361000 11932.1 9893.4 11259.5 9550.5 11996.6 11414.2 11477.4 10467.8 8881.3 8301.1 FALSE TRUE 10917.21224 9249.337862 10495.23651 10286.08116 11518.75002 12060.46214 10711.76359 10376.28113 9804.542917 9329.502938 1.170181553 0.991407358 1.124951306 1.102532604 1.234658491 1.292722905 1.14816016 1.112200853 1.050918037 1 13.1875845 -8.299530506 2.02445889 1.003881602 1.150714533 0.316752289 0.07499339 0.438353468 3.383402174 0.078879523 0.022797376 5.02E-09 8.299530506 0.146832931 DSNNLCLHFNPR ddPTM_A459_MK2206_30min_R2 4 DSNNLCLHFNPR 12 0 P09382 P09382 LGALS1 Galectin-1 0 ;;; 170.4 0.00043277 59929000 242940 307160 254269 290598 302927 306908 297043 244803 282913 278905 FALSE TRUE 261539.6732 291906.8811 262746.2016 266855.2138 291032.5639 318587.599 258040.8973 276799.5926 307520.2614 269804.3527 0.969367879 1.081920577 0.973839743 0.989069343 1.078680018 1.180809708 0.956400053 1.025927083 1.139789845 1 18.0415541 -6.264239023 24.8895325 1.065397849 1.00702521 0.159660708 0.067228641 490.0520716 4356687.765 0.020855206 0.024659475 5.44E-07 6.264239023 -0.058372639 DSPAFPDS(ph)PWR ddPTM_A459_MK2206_30min_R1 4 DSPAFPDSPWR 11 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 DSPAFPDS(1)PWR;DSPAFPDS(1)PWR;DSPAFPDS(1)PWR;DSPAFPDS(1)PWR 124.48 0.0035592 27539400 11239.2 12583.3 11285.2 9534.87 8013.04 8329.57 10479.8 8085.65 12128.6 11916.55 TRUE FALSE 10283.24702 11764.12488 10519.19207 10269.24734 7693.863649 8801.183055 9780.711663 8014.958015 13389.41137 13392.86218 0.767815489 0.878387661 0.785432712 0.76677018 0.574474936 0.657154754 0.730292863 0.598449973 0.99974234 1 13.70917669 -8.278421023 24.57570636 0.99987131 0.722294964 0.629236456 0.085963403 533.4212802 771954.0987 0.090602825 0.023650938 5.27E-09 8.278421023 -0.277576346 DSPAFPDS(ph)PWR ddPTM_A459_MK2206_30min_R2 3 DSPAFPDSPWR 11 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 DSPAFPDS(1)PWR;DSPAFPDS(1)PWR;DSPAFPDS(1)PWR 155.88 0.00054005 11090200 97368 91920 84898 91110 80317 83904 99139 74393 65405.6 91291 TRUE FALSE 104822.5689 87355.38646 87728.45695 83666.02155 77163.35102 87097.02551 86121.93021 84116.42053 71094.46086 88312.18215 1.186954805 0.989165757 0.993390207 0.947389358 0.873756589 0.986240215 0.975198756 0.952489436 0.805035717 1 16.43032484 DSPCS(ph)GSRSPLVSPNGR ddPTM_A459_MK2206_30min_R1 1 DSPCSGSRSPLVSPNGR 17 1 Q5JPB2 Q5JPB2 ZNF831 Zinc finger protein 831 1 DS(0.118)PCS(0.815)GS(0.055)RS(0.012)PLVSPNGR 64.422 0.025169 523030000 9576.9 3863.9 6400.3 4229.3 13663 12912 11510 8483.6 4096.4 4363.2 TRUE FALSE 8762.334365 3612.359408 5965.865468 4555.041419 13118.77378 13643.06628 10742.1889 8409.42878 4522.235439 4903.746156 1.786865406 0.736653018 1.216593453 0.928890133 2.67525548 2.78217221 2.190608681 1.714898878 0.92220015 1 12.25966858 -4.437784565 22.20281714 1.633345757 13.6856578 0.001795544 0.714382528 7099.421571 1845579.067 0.190677436 15876.85812 3.65E-05 4.437784565 12.05231204 DSPFLAEHKYPT(ph)LPGK ddPTM_A459_MK2206_30min_R2 1 DSPFLAEHKYPTLPGK 16 1 E9PI79;H0YDJ2;E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 E9PI79;H0YDJ2 PPFIBP2 Liprin-beta-2 1 DSPFLAEHKY(0.454)PT(0.546)LPGK 65.472 0.031581 3417300 33852 37943 30855 24240 24126 22627 24347 21027 21065 26838 TRUE FALSE 36443.73515 36058.80579 31883.6903 22259.51446 23178.69202 23488.08634 21150.20965 23775.3011 22897.19562 25962.27826 1.403718687 1.388892201 1.22807752 0.857379088 0.892783437 0.904700508 0.814651528 0.91576328 0.881940922 1 14.66412937 -5.617784954 3.103995567 0.887427651 1.388007927 0.948989048 0.048137662 0.04651542 0.891173414 0.013386531 0.025968035 2.41E-06 5.617784954 0.500580276 DSPPT(ph)PTMYK ddPTM_A459_MK2206_30min_R1 1 DSPPTPTMYK 10 0 Q9C0B5-2;Q9C0B5;H0YEF4 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 DS(0.003)PPT(0.768)PT(0.229)MYK 160.72 0.0010228 11802000 2408.3 2542.5 1890.6 2277 2708.8 3104.2 4065.4 3802.1 3998.6 4205 TRUE FALSE 2203.461439 2376.982788 1762.27134 2452.374935 2600.90276 3279.957121 3794.204584 3768.858641 4414.268779 4725.947146 0.466247584 0.502964319 0.372892731 0.518917131 0.550345292 0.694031698 0.802845327 0.797482182 0.934049544 1 12.20638778 -7.210086518 0.678269508 0.979008943 0.432897283 0.951675623 0.044379608 0.149012006 0.138134755 0.039151651 0.027309079 6.16E-08 7.210086518 -0.54611166 down DSPPT(ph)PTMYK ddPTM_A459_MK2206_30min_R2 2 DSPPTPTMYK 10 0 Q9C0B5-2;Q9C0B5;H0YEF4 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 DS(0.005)PPT(0.555)PT(0.44)MYK;DS(0.02)PPT(0.49)PT(0.49)MYK 120.03 0.012195 18380200 178567 114988 152561 145884 134865 173585 213790 121390 185044 184270 TRUE FALSE 192238.2268 109277.8631 157647.3076 133964.8105 129569.5225 180190.8988 185719.1162 137256.0898 201138.7926 178257.285 1.078431251 0.613034486 0.884380729 0.751525025 0.726868035 1.01084732 1.041859895 0.76998867 1.128362258 1 17.44360151 -6.769786805 24.96077096 0.979063962 0.800647709 0.285295283 0.140934183 235.7914874 705067.9697 0.046556785 0.041728633 1.70E-07 6.769786805 -0.178416254 DSPQSLT(ph)DESCSEK ddPTM_A459_MK2206_30min_R1 1 DSPQSLTDESCSEK 14 0 Q9BV36;Q9BV36-4;Q9BV36-2 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 DSPQS(0.005)LT(0.993)DES(0.002)CS(0.001)EK 146.1 0.00052486 0 635.25 790.38 628.58 700.28 652.31 595.41 745.88 659.25 550.33 603.91 TRUE FALSE 581.2186517 738.9261183 585.9137409 754.2156869 626.3271114 629.1215997 696.1237061 653.4862468 607.5387729 678.7269301 0.856336512 1.088694268 0.863254005 1.111221102 0.922796906 0.926914156 1.02563148 0.962811726 0.895115172 1 9.406687446 -8.010759407 24.52169251 0.941359539 0.974495317 0.00920216 0.084380281 1797.582963 4096833.217 0.046829961 0.020152137 9.76E-09 8.010759407 0.033135778 DSPQSLT(ph)DESCSEK ddPTM_A459_MK2206_30min_R2 2 DSPQSLTDESCSEK 14 0 Q9BV36;Q9BV36-4;Q9BV36-2 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 DSPQSLT(0.945)DES(0.054)CS(0.001)EK;DSPQS(0.205)LT(0.781)DES(0.014)CSEK 218.83 1.14E-39 4386800 38838 36407 36309 35426 27617 26093.5 39853 26774.8 30321 25819 TRUE FALSE 41811.46714 34599.08132 37519.52394 32531.58248 26532.61782 27086.50643 34620.25323 30274.35829 32958.26577 24976.52814 1.67403039 1.385263841 1.502191326 1.30248617 1.062302081 1.084478446 1.386111513 1.212112353 1.319569541 1 14.60828533 -5.870240122 3.344291278 1.192669684 1.510870152 0.587620981 0.127792585 0.184458201 4.051628673 0.037614878 0.059848164 1.35E-06 5.870240122 0.318200468 DSPSKS(ph)SAEAQTPEDTPNK ddPTM_A459_MK2206_30min_R2 1 DSPSKSSAEAQTPEDTPNK 19 1 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 DS(0.004)PS(0.162)KS(0.417)S(0.417)AEAQTPEDTPNK 72.513 0.0069568 58668000 74701 84487 73753 103000 68740 155670 88743 60905 116980 70245 TRUE FALSE 80420.166 80291.49844 76211.88821 94584.57052 66040.92221 161594.1309 77090.9375 68865.49262 127154.7089 67952.9114 1.183469028 1.181575547 1.121539705 1.391913438 0.971863028 2.378031016 1.134475858 1.013429612 1.87121797 1 16.05224774 DSPSKSS(ph)AEAQTPEDTPNK ddPTM_A459_MK2206_30min_R1 2 DSPSKSSAEAQTPEDTPNK 19 1 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 DS(0.004)PS(0.025)KS(0.143)S(0.828)AEAQTPEDTPNK;DS(0.003)PS(0.313)KS(0.104)S(0.581)AEAQTPEDTPNK 136.59 9.52E-05 120152000 11598.9 13149.8 11881.7 12701.7 11685.5 10448.3 14700.7 14950.6 16358.5 16158.8 TRUE FALSE 10612.35265 12293.74563 11075.20331 13679.98713 11220.04179 11039.87372 13720.04313 14819.88848 18059.02461 18160.67414 0.58435896 0.676943242 0.609845385 0.753275293 0.617820776 0.607899995 0.755480938 0.816042861 0.994402767 1 14.14853014 -7.943983782 1.474112593 1.009797145 0.646389559 0.886449552 0.049526017 0.126536536 0.495561175 0.042581479 0.014688466 1.14E-08 7.943983782 -0.363407586 DSPSKSS(ph)AEAQTPEDTPNKSGAEAK ddPTM_A459_MK2206_30min_R2 1 DSPSKSSAEAQTPEDTPNKSGAEAK 25 2 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 DS(0.007)PS(0.057)KS(0.192)S(0.698)AEAQT(0.044)PEDT(0.002)PNKSGAEAK 45.707 0.024898 5080900 6137.5 14186 13294 10971 21046 12996 16539 7890 23349 11519 TRUE FALSE 6607.391719 13481.54387 13737.21532 10074.63421 20219.62829 13490.57189 14367.40943 8921.25009 25379.85381 11143.13597 0.592956214 1.209851868 1.232796168 0.904111215 1.814536621 1.210662054 1.289350634 0.800604974 2.277622195 1 13.44386768 -4.547873347 1.565176073 1.317658498 1.22E-34 0.210830475 0.415983005 3.245703806 4.809314851 0.110045602 7.815307217 2.83E-05 4.547873347 -1.317658498 DSQDAGGFGPEDR ddPTM_A459_MK2206_30min_R1 2 DSQDAGGFGPEDR 13 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 137.95 0.014044 7382100 2556.6 2256.59 2184.09 1881.14 2743.8 2035.83 2406.3 2064.32 1973.37 2082.9 FALSE TRUE 2339.147745 2109.685581 2035.840056 2026.025729 2634.508636 2151.096935 2245.780118 2046.271868 2178.508873 2340.945377 0.999232091 0.901210939 0.869665767 0.865473303 1.12540372 0.918900952 0.95934751 0.874122006 0.930610724 1 11.19287556 -4.739010607 23.74796953 0.935847444 0.999232559 0.056141897 0.074334545 3232.515333 3422307.754 0.018892659 0.881204417 1.82E-05 4.739010607 0.063385115 DSQDAGGFGPEDR ddPTM_A459_MK2206_30min_R2 2 DSQDAGGFGPEDR 13 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 147.33 0.0079824 16278000 47379 61665 61763 74246 72998 73988 65690 54564 66979 62895 FALSE TRUE 51006.37267 58602.80577 63822.14759 68179.8643 70131.73173 76803.66519 57064.82409 61695.70215 72804.71235 60842.7413 0.838331271 0.963184835 1.048968969 1.120591591 1.152672122 1.262330782 0.937906854 1.014019106 1.196604735 1 15.89279754 -4.987830582 1.627191017 1.100055589 0.801606734 0.446561525 0.091320294 0.647575573 2.251805437 0.027110195 0.271541272 1.03E-05 4.987830582 -0.298448855 DSQDAS(ph)AEQSDHDDEVASLASASGGFGTK ddPTM_A459_MK2206_30min_R2 3 DSQDASAEQSDHDDEVASLASASGGFGTK 29 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 DS(0.014)QDAS(0.59)AEQS(0.395)DHDDEVASLASASGGFGTK;DS(0.004)QDAS(0.719)AEQS(0.277)DHDDEVASLASASGGFGTK;DS(0.08)QDAS(0.57)AEQS(0.35)DHDDEVASLASASGGFGTK 83.826 5.08E-06 229575000 322465 424553 386721 431944 416520 417024 431959 324617 353556 411545 TRUE FALSE 347153.1683 403470.3154 399614.0851 396652.7935 400165.332 432894.1405 375242.2644 367045.5565 384307.6618 398116.3204 0.871989292 1.013448318 1.003762129 0.996323871 1.005146766 1.087355927 0.94254429 0.921955564 0.965315015 1 18.60283049 -10.42553735 11.7464335 1 0.982178246 0.009570682 0.055549324 0 0 0.055377905 0.013431115 3.75E-11 10.42553735 -0.017821753 DSQDASAEQS(ph)DHDDEVASLASASGGFGTK ddPTM_A459_MK2206_30min_R1 4 DSQDASAEQSDHDDEVASLASASGGFGTK 29 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 DS(0.008)QDAS(0.381)AEQS(0.611)DHDDEVASLASASGGFGTK;DS(0.008)QDAS(0.276)AEQS(0.716)DHDDEVASLASASGGFGTK;DS(0.001)QDAS(0.07)AEQS(0.929)DHDDEVASLASASGGFGTK;DS(0.003)QDAS(0.107)AEQS(0.89)DHDDEVASLASASGGFGTK 108.85 7.24E-11 420306000 16741 15777.2 17271.7 14201.1 16271.6 15135.6 15580.4 15102 14056.9 13239.9 TRUE FALSE 15317.09004 14750.10141 16099.34513 15294.87118 15623.46772 15992.56459 14541.05994 14969.96481 15518.16506 14880.15877 1.029363347 0.99125968 1.081933693 1.027870161 1.049953025 1.074757658 0.977211344 1.006035288 1.042876309 1 13.8611023 -11.46877077 14.02534425 0.99460508 1.030964775 0.079869447 0.031808225 0.006240664 2.41E-05 0.035819193 0.007618072 3.40E-12 11.46877077 0.036359695 DSQDASAEQS(ph)DHDDEVASLASASGGFGTK ddPTM_A459_MK2206_30min_R2 1 DSQDASAEQSDHDDEVASLASASGGFGTK 29 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 DS(0.044)QDAS(0.474)AEQS(0.482)DHDDEVASLASASGGFGTK 65.171 0.0004428 58563000 57030 84751 74895 79905 76451 76712 76388 64160 64074 77409 TRUE FALSE 61396.26065 80542.38858 77391.96192 73376.5059 73449.1496 79631.32891 66358.16384 72545.93229 69647.0407 74883.15067 0.819894196 1.075574249 1.033503014 0.979880056 0.980850151 1.063407832 0.886156141 0.968788461 0.93007626 1 16.19235352 -7.26748242 24.94996028 0.943654261 0.996778907 0.087616605 0.071499124 1127.384632 4654622.822 0.028309059 0.01964134 5.40E-08 7.26748242 0.053124646 DSQQTEFTQNAATGLNIS(ph)RDETVLQEEAR ddPTM_A459_MK2206_30min_R1 1 DSQQTEFTQNAATGLNISRDETVLQEEAR 29 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 DSQQT(0.002)EFT(0.026)QNAAT(0.23)GLNIS(0.727)RDET(0.015)VLQEEAR 52.721 0.0073847 4323800 231.14 324.37 229.24 135.89 183.64 151.55 62.737 141.83 261.6 167.55 TRUE FALSE 211.4803292 303.253454 213.6798275 146.3562713 176.3252299 160.13063 58.5519292 140.5899953 288.7942561 188.3073589 1.123059292 1.610417435 1.134739655 0.777220137 0.9363693 0.850368413 0.310938083 0.746598519 1.533632343 1 7.55694557 -5.560298545 4.378021739 0.848533891 1.371864563 0.291044682 0.30425094 0.227928882 9.815881302 0.085335105 0.160013342 2.75E-06 5.560298545 0.523330672 DSQS(ph)ASGEERPPEADGK ddPTM_A459_MK2206_30min_R1 2 DSQSASGEERPPEADGK 17 1 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 DS(0.028)QS(0.905)AS(0.067)GEERPPEADGK;DS(0.018)QS(0.918)AS(0.064)GEERPPEADGK 98.376 0.016664 6054300 3934.8 4244.9 4502.1 3298.2 3381.3 3709.5 4618 3690.7 4962.7 5075 TRUE FALSE 3600.124598 3968.556238 4196.509996 3552.227935 3246.615661 3919.528684 4309.941646 3658.432599 5478.590424 5703.729314 0.631187842 0.69578271 0.735748449 0.622790413 0.569209281 0.687187008 0.755635727 0.641410628 0.960527774 1 12.4776898 -8.291205016 5.963989304 0.987535452 0.669230713 0.848342077 0.052925125 0.074757599 8.547305115 0.050994045 0.014180734 5.11E-09 8.291205016 -0.318304739 DSQS(ph)ASGEERPPEADGK ddPTM_A459_MK2206_30min_R2 1 DSQSASGEERPPEADGK 17 1 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 DS(0.069)QS(0.86)AS(0.071)GEERPPEADGK 72.801 0.014616 12294000 21676 15799 19748 20678 19131 15847 21895 17976 12170 24456 TRUE FALSE 23335.53123 15014.44463 20406.38846 18988.54125 18379.82081 16450.06869 19020.1602 20325.52492 13228.5246 23658.00272 0.986369454 0.634645486 0.862557533 0.802626556 0.776896555 0.695327872 0.803963057 0.859139512 0.559156441 1 14.53004066 -4.733572056 24.7091223 0.774482829 0.98637078 0.219778433 0.118166975 4036.444293 3578773.114 0.027038681 2.593709712 1.85E-05 4.733572056 0.211887951 DSS(ph)PGSSSTSLLIK ddPTM_A459_MK2206_30min_R1 1 DSSPGSSSTSLLIK 14 0 H0YG46;J3KNE4;A0A0A0MTP3;Q99550-2;Q99550;U3KQJ0 H0YG46 MPHOSPH9 M-phase phosphoprotein 9 1 DS(0.257)S(0.734)PGS(0.004)S(0.002)S(0.001)T(0.001)S(0.001)LLIK 86.756 0.022926 4820600 1925.9 1762.3 1443.5 1405.6 1451 1112.2 1535.2 1160.6 1508.8 1450.7 TRUE FALSE 1762.092092 1647.57395 1345.519242 1513.859556 1393.203597 1175.171803 1432.789609 1150.452997 1665.645159 1630.423668 1.080757184 1.010518911 0.825257427 0.928506857 0.854504031 0.720776952 0.878783617 0.705615981 1.021602662 1 10.67103118 -5.120600005 3.343093346 0.853094444 1.071851397 0.346095127 0.098518797 0.243055318 4.898137482 0.024503773 0.085379728 7.58E-06 5.120600005 0.218756952 DSS(ph)PGSSSTSLLIK ddPTM_A459_MK2206_30min_R2 1 DSSPGSSSTSLLIK 14 0 H0YG46;J3KNE4;A0A0A0MTP3;Q99550-2;Q99550;U3KQJ0 H0YG46 MPHOSPH9 M-phase phosphoprotein 9 1 DS(0.001)S(0.996)PGSS(0.001)S(0.001)T(0.001)SLLIK 115.37 0.0028065 2004800 18501 14901 14608 17785 14472 11446 22836 14607 11073 17851 TRUE FALSE 19917.45078 14161.03801 15095.02343 16331.90861 13903.75656 11881.58555 19837.60577 16516.18505 12036.10952 17268.52333 1.153396292 0.820049157 0.874135161 0.945761736 0.80515029 0.68804873 1.148772561 0.95643297 0.696997033 1 14.0758571 -4.753322953 24.87117949 0.88201076 1.153396825 0.273636908 0.13279546 394.6587355 1209251.473 0.033109453 0.358249189 1.76E-05 4.753322953 0.271386065 DSS(ph)PSSSPSPK ddPTM_A459_MK2206_30min_R2 1 DSSPSSSPSPK 11 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 DS(0.047)S(0.703)PS(0.077)S(0.141)S(0.031)PS(0.001)PK 87.216 0.037243 0 27903 17757 18445 19643 24223 14400 22918 23236 18829 29249 TRUE FALSE 30039.27513 16875.2132 19059.94709 18038.10407 23271.88331 14948.00209 19908.83907 26273.02498 20466.71238 28294.60753 1.061660781 0.59641093 0.673624721 0.637510312 0.822484754 0.528298619 0.70362662 0.928552374 0.723343215 1 14.78823951 -8.74201312 0.823048672 0.994577034 0.712340806 0.204217831 0.151329846 1.376021273 1.891635976 0.144052324 0.050508287 1.81E-09 8.74201312 -0.282236228 DSS(ph)TSPGDYVLSVSENSR ddPTM_A459_MK2206_30min_R1 5 DSSTSPGDYVLSVSENSR 18 0 P46108-2;I3L297;P46108 P46108-2;P46108 CRK Adapter molecule crk 1 DSS(1)TSPGDYVLSVSENSR;DS(0.148)S(0.412)T(0.412)S(0.027)PGDYVLSVSENSR;DSS(0.996)T(0.004)SPGDYVLSVSENSR;DSS(0.984)T(0.014)S(0.001)PGDYVLSVSENSR;DS(0.083)S(0.903)T(0.014)SPGDYVLSVSENSR 356.15 2.50E-184 183871000 10892.78 11406.7 12453.29 8289.26 10504.1 10020.5 12710.82 10202.09 13017.17 14200.48 TRUE FALSE 9966.291861 10664.12176 11607.99537 8927.700241 10085.69945 10587.85205 11862.90439 10112.8942 14370.3514 15959.74267 0.624464446 0.668188828 0.727329733 0.559388734 0.631946245 0.663409948 0.743301733 0.633650204 0.900412475 1 13.96214977 -8.388285042 3.230881844 0.997807488 0.657529485 0.847893903 0.05045071 0.086158215 1.622700675 0.049360459 0.013247668 4.09E-09 8.388285042 -0.340278003 DSS(ph)TSPGDYVLSVSENSR ddPTM_A459_MK2206_30min_R2 6 DSSTSPGDYVLSVSENSR 18 0 P46108-2;I3L297;P46108 P46108-2;P46108 CRK Adapter molecule crk 1 DS(0.132)S(0.854)T(0.014)SPGDYVLSVSENSR;DS(0.119)S(0.856)T(0.02)S(0.005)PGDYVLSVSENSR;DSS(0.994)T(0.001)S(0.005)PGDYVLSVSENSR;DSS(0.972)T(0.014)S(0.014)PGDYVLSVSENSR;DSS(0.998)T(0.001)S(0.001)PGDYVLSVSENSR;DSS(0.986)T(0.013)S(0.001)PGDYVLSVSENSR 292.2 6.72E-81 120491000 394972.4 362291.3 353711.6 361745.9 342396.6 299991.7 410251.7 298395.3 275575.4 380284.4 TRUE FALSE 425211.7906 344300.4409 365504.1682 332190.1028 328952.3891 311408.0944 356385.159 337396.5903 299544.4502 367875.7512 1.155857077 0.93591502 0.993553304 0.902995377 0.894194271 0.846503455 0.968765019 0.91714822 0.814254403 1 18.48885906 -1.58304969 0.991534854 0.905946462 199.9999998 0.612285704 0.05651006 876.6683564 1.4271881 0.017230919 396191.6922 0.026118625 1.58304969 199.0940534 DSS(ph)VEVR ddPTM_A459_MK2206_30min_R1 2 DSSVEVR 7 0 O15371-2;O15371-3;O15371;B0QYA6;B0QYA5 O15371-2 EIF3D Eukaryotic translation initiation factor 3 subunit D 1 DS(0.367)S(0.633)VEVR;DS(0.13)S(0.87)VEVR 98.629 0.021733 20563900 12495.3 13114.4 10176.5 9870.9 8106.8 7675.9 11009.3 11585.7 2196.46 7616.6 TRUE FALSE 11432.50912 12260.65018 9485.747533 10631.15843 7783.88899 8110.502825 10274.88968 11484.40745 2424.789877 8560.20191 1.335541993 1.432285162 1.108121938 1.241928466 0.909311377 0.947466299 1.200309267 1.341604739 0.283263164 1 13.06342911 -4.522321535 0.323803106 0.883560903 1.918261639 0.28576926 0.26553759 11.9242976 0.889751908 0.272713341 5.024858234 3.00E-05 4.522321535 1.034700736 DSS(ph)VEVR ddPTM_A459_MK2206_30min_R2 2 DSSVEVR 7 0 O15371-2;O15371-3;O15371;B0QYA6;B0QYA5 O15371-2 EIF3D Eukaryotic translation initiation factor 3 subunit D 1 DS(0.075)S(0.925)VEVR;DS(0.154)S(0.846)VEVR 104.06 0.018235 76707000 228906 273988 215660 278816 293382 218396 257107 248656 272786 294613 TRUE FALSE 246431.2194 260382.1543 222849.9968 256035.8409 281862.3486 226707.2128 223348.5421 281156.193 296512.4332 284999.8019 0.864671546 0.913622229 0.781930357 0.898371996 0.988991384 0.795464457 0.78367964 0.986513643 1.040395225 1 18.12060139 -7.906034452 6.558801502 1.017910036 0.864124801 0.550431188 0.061693928 0.165849031 9.577240928 0.035902052 0.017024318 1.24E-08 7.906034452 -0.153785235 DSSDS(ph)ADGRATPSENLVPSSAR ddPTM_A459_MK2206_30min_R1 1 DSSDSADGRATPSENLVPSSAR 22 1 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 DS(0.012)S(0.041)DS(0.856)ADGRAT(0.081)PS(0.001)ENLVPS(0.005)S(0.005)AR 84.159 0.00037984 45747000 5291.7 5533.6 5659.6 5470.6 5287.1 4708.2 4215.4 5647.1 3741.7 3423.5 TRUE FALSE 4841.613127 5173.361634 5275.442121 5891.94656 5076.503611 4974.774215 3934.198357 5597.728 4130.663105 3847.629026 1.258336782 1.344558324 1.371089075 1.531318773 1.319384893 1.292945391 1.022499397 1.454851276 1.073560647 1 11.90975399 -6.938288428 3.197524088 1.173500721 1.37385466 0.368364715 0.136268097 0.304948412 6.34255409 0.051196095 0.043319839 1.15E-07 6.938288428 0.200353939 DSSDS(ph)ADGRATPSENLVPSSAR ddPTM_A459_MK2206_30min_R2 1 DSSDSADGRATPSENLVPSSAR 22 1 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 DS(0.006)S(0.03)DS(0.892)ADGRAT(0.066)PS(0.005)ENLVPS(0.001)SAR 95.414 0.0010248 9993400 13071 13973 10701 13577 12797 13564 12048 9815.3 14229 11687 TRUE FALSE 14071.72581 13279.12114 11057.766 12467.71567 12294.52548 14080.18752 10466.08313 11098.19341 15466.6127 11305.65415 1.244662682 1.174555755 0.978073967 1.102785872 1.087466972 1.245411132 0.925738838 0.981649825 1.368042264 1 13.46475685 -5.02116789 10.59111301 1.085418798 1.227343376 0.141401951 0.126950601 0.923823938 466.7096616 0.031443603 0.089974518 9.52E-06 5.02116789 0.141924578 DSSDSADGRAT(ph)PSENLVPSSAR ddPTM_A459_MK2206_30min_R1 2 DSSDSADGRATPSENLVPSSAR 22 1 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 DS(0.004)S(0.004)DS(0.016)ADGRAT(0.914)PS(0.022)ENLVPS(0.02)S(0.02)AR;DSSDS(0.018)ADGRAT(0.944)PS(0.038)ENLVPSSAR 134.52 0.00019407 16766400 3572.02 3890.29 3572.96 3404.08 4275.87 3689.25 3333.77 3348.21 2635.32 2589.93 TRUE FALSE 3268.200942 3637.031414 3330.43743 3666.262831 4105.553044 3898.132147 3111.380286 3318.936953 2909.270945 2910.790081 1.122788264 1.249499728 1.144169568 1.259542162 1.410460022 1.339200711 1.068912632 1.140218587 0.999478102 1 11.50719508 -7.280126265 22.90247742 1.063837116 1.256393299 0.564594746 0.086702184 243.6736535 298641.6628 0.039306162 0.026575087 5.25E-08 7.280126265 0.192556183 DSSDSADGRAT(ph)PSENLVPSSAR ddPTM_A459_MK2206_30min_R2 3 DSSDSADGRATPSENLVPSSAR 22 1 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 DSSDS(0.022)ADGRAT(0.909)PS(0.062)ENLVPS(0.005)S(0.002)AR;DS(0.014)S(0.035)DS(0.094)ADGRAT(0.838)PS(0.012)ENLVPS(0.003)S(0.004)AR;DS(0.002)S(0.005)DS(0.237)ADGRAT(0.753)PS(0.003)ENLVPSSAR 108.12 0.0011044 64507000 48281.1 88620 65839.6 98167.6 85162.2 84068.3 83996.5 64719.5 84026.3 72820.5 TRUE FALSE 51977.53814 84219.25967 68034.6594 90146.99306 81818.30412 87267.57807 72967.65865 73178.56087 91334.75569 70444.37305 0.737852236 1.195542753 0.965792674 1.279690473 1.161459753 1.238815455 1.035819548 1.038813431 1.296551474 1 16.10419685 -4.756222665 24.99881529 1.13618276 0.737851615 0.525185808 0.113199257 128.0714093 613658.7339 0.027025883 0.223151666 1.75E-05 4.756222665 -0.398331145 DSSEATGWEEPS(ph)PPSIR ddPTM_A459_MK2206_30min_R1 4 DSSEATGWEEPSPPSIR 17 0 A0A1B0GU24;Q9HCJ0;Q9HCJ0-2 A0A1B0GU24 TNRC6C Trinucleotide repeat-containing gene 6C protein 1 DSSEATGWEEPS(0.867)PPS(0.133)IR;DSSEATGWEEPS(0.931)PPS(0.069)IR;DSSEATGWEEPS(0.962)PPS(0.038)IR;DSSEATGWEEPS(0.93)PPS(0.07)IR 208.38 4.71E-09 16284400 2533.34 2386.52 2407.24 1980.1 2654.67 2686.32 2578.47 2606.88 2395.49 2467.07 TRUE FALSE 2317.86613 2231.157114 2243.843256 2132.607645 2548.928873 2838.417117 2406.464971 2584.088323 2644.509758 2772.709257 0.835957151 0.804684843 0.809260203 0.769142181 0.919291796 1.023698071 0.867911039 0.931972336 0.953763815 1 11.43708063 -6.368886941 5.139706167 0.948010526 0.805570381 0.742473983 0.041984949 0.119622761 4.721647199 0.013156494 0.014964479 4.28E-07 6.368886941 -0.142440145 DSSEATGWEEPS(ph)PPSIR ddPTM_A459_MK2206_30min_R2 3 DSSEATGWEEPSPPSIR 17 0 A0A1B0GU24;Q9HCJ0;Q9HCJ0-2 A0A1B0GU24 TNRC6C Trinucleotide repeat-containing gene 6C protein 1 DSSEATGWEEPS(0.967)PPS(0.033)IR;DSSEATGWEEPS(0.989)PPS(0.01)IR;DSSEAT(0.011)GWEEPS(0.964)PPS(0.025)IR 151.59 0.00020706 6661800 16972.9 21984.3 22608.9 26364.5 21575.8 23557.6 26884.5 17783 20546.3 22866.2 TRUE FALSE 18272.35827 20892.59163 23362.66944 24210.43601 20728.62568 24454.10098 23354.53286 20107.29916 22333.38003 22120.07777 0.826053076 0.944508055 1.056174833 1.094500493 0.937095516 1.105516049 1.055806996 0.909006712 1.009642926 1 14.43306884 -4.892007843 2.92901933 1.021207411 0.814867325 0.504524377 0.0595701 0.269062876 3.842006981 0.015806201 0.116934514 1.28E-05 4.892007843 -0.206340085 DSSFTEVPRS(ph)PK ddPTM_A459_MK2206_30min_R1 1 DSSFTEVPRSPK 12 1 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 DS(0.001)S(0.007)FT(0.013)EVPRS(0.979)PK 140.33 0.0051463 42036000 4341.6 5059.5 5077.5 4506.8 3365.5 3383.7 3505 4092.4 4293.5 3619.6 TRUE FALSE 3972.324121 4730.12563 4732.853447 4853.914517 3231.445008 3575.28217 3271.187845 4056.620578 4739.824689 4068.023375 0.976475245 1.162757731 1.163428282 1.19318747 0.794352616 0.878874539 0.804122185 0.997196969 1.165141951 1 11.99011225 -6.248300423 24.96186819 0.92996292 1.129552305 0.380197749 0.114587556 822.9597087 1563488.462 0.035822596 0.045952673 5.65E-07 6.248300423 0.199589385 DSSFTEVPRS(ph)PK ddPTM_A459_MK2206_30min_R2 1 DSSFTEVPRSPK 12 1 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 DSSFTEVPRS(1)PK 142.39 0.0043316 19908000 37572 43066 39107 32769 33506 25517 40534 27434 30936 35810 TRUE FALSE 40448.54121 40927.40506 40410.80786 30091.66788 32190.38609 26488.06732 35211.83711 31019.718 33626.75736 34641.52263 1.167631736 1.181455143 1.166542484 0.868658927 0.929242817 0.76463346 1.01646332 0.895449034 0.970706678 1 15.08021472 -5.754374806 24.98989715 0.914218801 1.172834418 0.741067626 0.067951249 75.8441956 268284.6392 0.018010112 0.030361368 1.76E-06 5.754374806 0.258615617 DSSGSFS(ph)PCQPFLEK ddPTM_A459_MK2206_30min_R2 1 DSSGSFSPCQPFLEK 15 0 H3BMJ2;Q6ZRI6-2;Q6ZRI6 H3BMJ2 C15orf39 Uncharacterized protein C15orf39 1 DS(0.012)S(0.007)GS(0.137)FS(0.845)PCQPFLEK 112.91 0.003517 0 18550 15016 14356 15747 14133 13809 16665 10862 14306 15991 TRUE FALSE 19970.20226 14270.32728 14834.62187 14460.41973 13578.06741 14334.51117 14476.86548 12281.70069 15550.31002 15469.21498 1.290964169 0.922498478 0.958977032 0.934786914 0.87774767 0.926647615 0.935850042 0.793944664 1.00524235 1 13.91711237 -4.761427293 10.97439925 0.921664287 1.291854308 0.780507339 0.057578871 0.02780572 111.4481869 0.013555016 0.076202214 1.73E-05 4.761427293 0.370190021 DSSGSVS(ph)PNTLSQEEGDQICLYHIR ddPTM_A459_MK2206_30min_R1 2 DSSGSVSPNTLSQEEGDQICLYHIR 25 0 H7C4T3;H7C4L8;G5E9U9;Q9H0J9 H7C4T3 PARP12 Poly [ADP-ribose] polymerase 12 1 DS(0.055)S(0.055)GS(0.043)VS(0.833)PNT(0.014)LSQEEGDQICLYHIR;DS(0.05)S(0.05)GS(0.05)VS(0.845)PNT(0.005)LSQEEGDQICLYHIR 158.33 4.15E-13 18809900 2765.06 2587.41 3003.37 2720.41 3242.22 3290.53 3442.62 2959.32 2605.6 2906.4 TRUE FALSE 2529.877127 2418.969139 2799.509612 2929.93645 3113.075512 3476.836965 3212.969101 2933.446977 2876.461444 3266.466774 0.774499575 0.740546072 0.857045182 0.896974209 0.953040618 1.064402979 0.983622159 0.898048926 0.880603307 1 11.67351525 -5.648098124 1.605559487 0.962779002 0.753076103 0.715765172 0.050579638 0.23328088 1.193725417 0.017655206 0.044878932 2.25E-06 5.648098124 -0.209702899 DSSGSVS(ph)PNTLSQEEGDQICLYHIR ddPTM_A459_MK2206_30min_R2 4 DSSGSVSPNTLSQEEGDQICLYHIR 25 0 H7C4T3;H7C4L8;G5E9U9;Q9H0J9 H7C4T3 PARP12 Poly [ADP-ribose] polymerase 12 1 DS(0.055)S(0.055)GS(0.044)VS(0.792)PNT(0.055)LSQEEGDQICLYHIR;DS(0.053)S(0.053)GS(0.053)VS(0.841)PNT(0.001)LSQEEGDQICLYHIR;DS(0.162)S(0.162)GS(0.031)VS(0.595)PNT(0.049)LSQEEGDQICLYHIR;DS(0.003)S(0.009)GS(0.085)VS(0.875)PNT(0.027)LSQEEGDQICLYHIR 137.28 2.40E-08 29334700 81551 85939 85403 103814 96513 89713 101926 78862 86723.3 94928 TRUE FALSE 87794.60726 81671.39423 88250.29339 95332.06412 92723.41468 93127.09108 88542.99376 89169.53417 94266.33587 91830.50713 0.956050554 0.889371046 0.961012807 1.038130651 1.00972343 1.014119316 0.964200205 0.971022996 1.026525267 1 16.48668589 -5.526119678 7.827975431 1.001215564 0.923158791 0.611562399 0.025981548 0.074724362 37.278852 0.007129432 0.013069087 2.98E-06 5.526119678 -0.078056772 DSSIIDPGTEQDLPS(ph)PENSSVK ddPTM_A459_MK2206_30min_R1 1 DSSIIDPGTEQDLPSPENSSVK 22 0 Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150;H7C183 Q70CQ2-3 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 DSSIIDPGTEQDLPS(0.977)PENS(0.017)S(0.005)VK 114.21 2.33E-05 9782400 2640.8 2186.6 2417 1806.9 2075.2 1601.7 1787.6 1905.4 2130.5 1681.8 TRUE FALSE 2416.186093 2044.251943 2252.940774 1946.067751 1992.54039 1692.38687 1668.352466 1888.741289 2351.973099 1890.154081 1.278301127 1.081526614 1.191934984 1.029581541 1.054168234 0.895369794 0.882654215 0.999252552 1.244328768 1 10.88428813 -5.832485564 1.800657927 0.998600184 1.184865893 0.346150172 0.104176013 0.418210799 2.767820459 0.034400955 0.066038715 1.47E-06 5.832485564 0.18626571 DSSIIDPGTEQDLPS(ph)PENSSVK ddPTM_A459_MK2206_30min_R2 1 DSSIIDPGTEQDLPSPENSSVK 22 0 Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150;H7C183 Q70CQ2-3 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 DSSIIDPGTEQDLPS(0.884)PENS(0.085)S(0.031)VK 90.896 0.00025537 3809000 33974 45802 38682 40949 49324 40072 44780 36863 46206 42856 TRUE FALSE 36575.07556 43527.53928 39971.63857 37603.33571 47387.29193 41596.96804 38900.33221 41681.12067 50224.91436 41457.61223 0.882228223 1.049928757 0.964156796 0.907030909 1.143029938 1.003361405 0.938315791 1.005391252 1.211476292 1 15.33934941 -1.522878745 0.281780664 1.053492179 0.093571791 0.174352284 0.088197893 109.0706127 1.539499344 0.098918176 51.6580996 0.03 1.522878745 -0.959920388 DSSKGEDS(ph)AEETEAK ddPTM_A459_MK2206_30min_R1 1 DSSKGEDSAEETEAK 15 1 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.002)S(0.009)KGEDS(0.989)AEETEAK 135.55 0.0019428 4736400 1373.5 1754.7 1617.4 1538.4 1138.8 969.8 1485.3 1529.2 1560.9 2185 TRUE FALSE 1256.676612 1640.468711 1507.615394 1656.887835 1093.439185 1024.709238 1386.218347 1515.830366 1723.161141 2455.694296 0.511739843 0.668026437 0.613926333 0.67471258 0.445266818 0.417278828 0.564491415 0.617271608 0.701700185 1 11.26191526 -8.696839112 1.465300717 0.998909038 0.55963026 0.733753183 0.080406499 0.381922653 1.612664764 0.08525018 0.025002536 2.01E-09 8.696839112 -0.439278778 DSSKGEDS(ph)AEETEAK ddPTM_A459_MK2206_30min_R2 1 DSSKGEDSAEETEAK 15 1 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 DSSKGEDS(1)AEETEAK 133.52 0.0034514 0 17623 11900 12969 11093 9618 7584.6 14383 8770.4 6473.6 16859 TRUE FALSE 18972.23043 11309.0633 13401.37999 10186.66642 9240.348993 7873.237268 12494.49482 9916.721393 7036.662026 16308.89221 1.163305894 0.693429275 0.821722274 0.624608115 0.566583486 0.482757331 0.766115482 0.6080561 0.43146168 1 13.99337117 -1.932287841 0.997057025 0.628156274 199.9999997 0.460806617 0.159636805 527.8780276 1.862467209 0.047985852 238904.1677 0.011687245 1.932287841 199.3718434 DSSKGEDS(ph)AEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_A459_MK2206_30min_R2 1 DSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 45 2 Q12906-7;Q12906-4;Q12906-6 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.15)S(0.15)KGEDS(0.472)AEET(0.223)EAKPAVVAPAPVVEAVS(0.004)T(0.001)PSAAFPSDATAENVK 50.187 0.00060614 5533700 48896 47025 58633 42378 47567 27234 53390 40424 33860 59984 TRUE FALSE 52639.51535 44689.80688 60587.79496 38915.58184 45699.28058 28270.40895 46379.82887 45707.5556 36805.0816 58026.72699 0.907159822 0.770159015 1.044136006 0.670649266 0.787555717 0.487196339 0.799283904 0.787698324 0.634278091 1 15.82442994 -5.784240435 24.99995883 0.723404949 0.893452473 0.228966242 0.139688026 314.0666106 344353.6266 0.037551828 0.055740355 1.64E-06 5.784240435 0.170047524 DSSKGEDSAEET(ph)EAK ddPTM_A459_MK2206_30min_R1 1 DSSKGEDSAEETEAK 15 1 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 DSSKGEDS(0.007)AEET(0.993)EAK 145.7 0.0037076 4370200 1586.3 1840.6 1875.2 1352.2 1050.9 1084.2 1533.4 1010.1 1631.8 2246 TRUE FALSE 1451.376855 1720.776605 1747.916649 1456.346678 1009.040428 1145.586467 1431.109684 1001.268802 1801.431449 2524.251436 0.574973172 0.681697782 0.692449501 0.576942002 0.399738478 0.453832154 0.566944189 0.396659694 0.713649767 1 11.30163991 -8.556112602 7.063515873 0.999989669 0.546997814 0.677821596 0.097139173 0.236522789 48.37216982 0.104125776 0.026937983 2.78E-09 8.556112602 -0.452991854 DSSKGEDSAEET(ph)EAK ddPTM_A459_MK2206_30min_R2 1 DSSKGEDSAEETEAK 15 1 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 DSSKGEDS(0.067)AEET(0.933)EAK 119.04 0.018892 0 15519 12196 14687 10067 10227 6114 11796 11184 5498.7 15202 TRUE FALSE 16707.14657 11590.36437 15176.65725 9244.493897 9825.436593 6346.672554 10247.17103 12645.7872 5976.966987 14705.95998 1.13607997 0.788140617 1.032007245 0.628622267 0.668126161 0.431571455 0.696803952 0.85990899 0.40643161 1 13.84411334 -5.765888414 24.99089384 0.65545013 0.965682435 0.377091269 0.184444011 111.0072463 623549.2034 0.049076509 0.075688036 1.71E-06 5.765888414 0.310232305 DSSKGEDSAEET(ph)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_A459_MK2206_30min_R1 1 DSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 45 2 Q12906-7;Q12906-4;Q12906-6 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.23)S(0.23)KGEDS(0.23)AEET(0.303)EAKPAVVAPAPVVEAVS(0.004)T(0.002)PSAAFPSDATAENVK 44.295 0.0022226 18954000 7027.4 10236 9457.6 8687.1 5643.2 5041.8 6119 7213.5 7815.1 6537 TRUE FALSE 6429.682728 9569.63454 8815.644462 9356.181947 5418.419394 5327.262359 5710.812675 7150.43313 8627.507612 7346.852912 0.875161488 1.302548813 1.199921186 1.273495204 0.737515704 0.725108073 0.777314143 0.973264773 1.174313371 1 12.84291068 -6.255908238 24.99053432 0.881911758 1.175417866 0.371876972 0.167541928 483.1868121 2183109.296 0.052347763 0.065678438 5.55E-07 6.255908238 0.293506108 DSSKGEDSAEET(ph)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_A459_MK2206_30min_R2 1 DSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 45 2 Q12906-7;Q12906-4;Q12906-6 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.162)S(0.162)KGEDS(0.146)AEET(0.504)EAKPAVVAPAPVVEAVS(0.012)T(0.012)PS(0.002)AAFPSDATAENVK 42.931 0.0062207 5250100 61643 62964 68538 60496 63414 33153 72525 56227 44045 68866 TRUE FALSE 66362.43548 59837.29932 70823.02271 55553.28328 60924.04773 34414.66065 63002.38038 63576.06196 47875.95448 66618.90806 0.996150153 0.898202944 1.063106928 0.833896635 0.914515856 0.516589984 0.945713195 0.954324588 0.718654146 1 16.02364409 -5.786848042 23.94428579 0.832592687 0.977058252 0.187509295 0.137542707 226.8188678 213745.608 0.038607981 0.057295606 1.63E-06 5.786848042 0.144465565 DSSLCVS(ph)GETLAAGTSSPK ddPTM_A459_MK2206_30min_R2 1 DSSLCVSGETLAAGTSSPK 19 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 DSS(0.001)LCVS(0.954)GET(0.044)LAAGTSSPK 153.21 4.20E-05 0 6650.6 9970.9 7507.6 7211.7 7375.1 7158 7744.6 5794.7 6214.1 7857.8 TRUE FALSE 7159.775049 9475.759605 7757.899637 6622.481041 7085.516517 7430.402706 6727.724717 6552.087186 6754.591185 7601.40063 0.941902078 1.246580738 1.02058818 0.871218525 0.932133019 0.977504419 0.885063825 0.861957882 0.888598235 1 12.89204956 -5.553051716 5.793702715 0.91415873 1.104039844 0.448411786 0.080317964 0.128172038 12.44182292 0.020700886 0.0373729 2.80E-06 5.553051716 0.189881113 DSSLCVSGETLAAGTS(ph)SPK ddPTM_A459_MK2206_30min_R1 1 DSSLCVSGETLAAGTSSPK 19 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 DSSLCVSGETLAAGT(0.013)S(0.494)S(0.494)PK 170.78 1.44E-07 0 769.91 684.18 604.96 487.25 474.59 361.24 566.5 364.81 637.13 611.1 TRUE FALSE 704.4251115 639.6397576 563.8970007 524.7780794 455.6860753 381.6930966 528.7098186 361.6205046 703.3619435 686.8076816 1.025651184 0.931322952 0.821040614 0.764083008 0.663484244 0.555749603 0.769807666 0.526523675 1.024103199 1 9.423762365 -5.256082202 1.51194885 0.724807588 1.034104257 0.232902553 0.155062515 0.666517275 2.455690187 0.044247176 0.234597247 5.55E-06 5.256082202 0.309296669 DSSLCVSGETLAAGTS(ph)SPK ddPTM_A459_MK2206_30min_R2 1 DSSLCVSGETLAAGTSSPK 19 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 DSSLCVSGETLAAGTS(0.985)S(0.015)PK 281.65 9.80E-72 4522200 58586 42227 48685 38217 33993 26719 50701 39173 24185 57154 TRUE FALSE 63071.3892 40130.06858 50308.1336 35094.54885 32658.26402 27735.81027 44043.8978 44293.0456 26288.56758 55289.06966 1.140756927 0.725822822 0.909911017 0.634746598 0.590682104 0.501650877 0.796611303 0.801117578 0.475474949 1 15.75470668 -1.792968494 0.972264453 0.683206079 200 0.378362055 0.161822442 776.5203961 2.219758363 0.050494971 343106.5947 0.016107625 1.792968494 199.3167939 DSSLCVSGETLAAGTS(ph)SPKTEGK ddPTM_A459_MK2206_30min_R1 1 DSSLCVSGETLAAGTSSPKTEGK 23 1 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 DSSLCVSGETLAAGTS(0.675)S(0.324)PKT(0.001)EGK 147.78 6.48E-08 5810400 1414 1476.9 1346.1 1186.5 1110.3 708.46 1187.3 1350.7 1510 1490.3 TRUE FALSE 1293.731875 1380.753542 1254.730482 1277.884436 1066.0744 748.572393 1108.097383 1338.890972 1666.969904 1674.929615 0.772409696 0.824365113 0.749124304 0.762948141 0.636489074 0.446927672 0.661578477 0.799371484 0.995247734 1 10.70988476 -8.126404972 2.920339996 1.003369922 0.692563601 0.598066543 0.098550415 0.216565932 3.312718902 0.094728998 0.030357829 7.47E-09 8.126404972 -0.310806321 DSSLCVSGETLAAGTSS(ph)PKTEGK ddPTM_A459_MK2206_30min_R1 1 DSSLCVSGETLAAGTSSPKTEGK 23 1 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 DSSLCVSGET(0.003)LAAGT(0.014)S(0.255)S(0.642)PKT(0.085)EGK 76.133 0.00047498 5409200 1659.4 1516.4 1986.1 1479.6 1300.9 1365.4 1584.9 1305.5 1725.9 1451.9 TRUE FALSE 1518.259316 1417.682084 1851.289066 1593.559048 1249.082398 1442.707768 1479.174213 1294.086151 1905.313481 1631.772333 0.930435751 0.868798947 1.134526568 0.97658173 0.765475902 0.884135451 0.906483204 0.793055578 1.167634383 1 10.67222407 -8.268268113 24.97952766 1.083817186 0.910482706 0.318644376 0.103090899 746.0344883 2728956.57 0.095562758 0.026861906 5.39E-09 8.268268113 -0.17333448 DSSPSSSPS(ph)PK ddPTM_A459_MK2206_30min_R1 2 DSSPSSSPSPK 11 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 DSS(0.03)PS(0.121)S(0.121)S(0.091)PS(0.637)PK;DSSPSSS(0.015)PS(0.985)PK 135.02 0.0015323 11991000 9996 13801.6 12052.2 10068.1 6393.8 5138.1 9153.6 8704.7 3871 9811.5 TRUE FALSE 9145.787709 12903.11333 11234.13024 10843.54681 6139.121407 5429.014782 8542.980046 8628.595726 4273.404303 11027.02269 0.829397741 1.170135738 1.01878182 0.983361249 0.556734268 0.492337318 0.774731338 0.782495508 0.387539268 1 13.42875569 -6.211414128 7.021249187 0.651734341 1.015814127 0.457064222 0.178104396 0.213177413 25.30934979 0.051123729 0.065836585 6.15E-07 6.211414128 0.364079786 DSSPSSSPS(ph)PK ddPTM_A459_MK2206_30min_R2 1 DSSPSSSPSPK 11 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 DSSPS(0.015)S(0.074)S(0.371)PS(0.539)PK 97.957 0.018725 4621100 39033 34412 39538 30953 37663 26107 37494 29570 28044 39474 TRUE FALSE 42021.39649 32703.15012 40856.17719 28424.04089 36184.16138 27100.52018 32570.99276 33434.90053 30483.21643 38185.96661 1.100440822 0.856418025 1.069926489 0.744358292 0.947577463 0.70969842 0.852957137 0.875580835 0.798283221 1 15.22075492 -5.756910674 24.99998226 0.840465832 0.993677399 0.345619136 0.101233316 126.5040831 698334.0551 0.025668951 0.042620676 1.75E-06 5.756910674 0.153211568 DSSS(ph)LSSCTSGILEER ddPTM_A459_MK2206_30min_R1 2 DSSSLSSCTSGILEER 16 0 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DSS(0.005)S(0.929)LS(0.045)S(0.008)CT(0.012)S(0.001)GILEER;DSS(0.035)S(0.94)LS(0.023)S(0.003)CTSGILEER 169.15 1.18E-05 7443100 2024.33 1712 1961.75 2027.9 2019.21 2214.24 2066.56 1885.38 1782.72 1996.56 TRUE FALSE 1852.150103 1600.548489 1828.591876 2184.089209 1938.78059 2339.608355 1928.703553 1868.896321 1968.040124 2243.908926 0.825412334 0.713285851 0.814913589 0.97334129 0.864019287 1.042648535 0.859528446 0.832875301 0.877058824 1 11.13179841 -5.583435291 5.817020632 0.913979625 0.767827613 0.45989473 0.068737364 0.168799093 11.28107057 0.018768412 0.033210575 2.61E-06 5.583435291 -0.146152012 DSSS(ph)LSSCTSGILEER ddPTM_A459_MK2206_30min_R2 2 DSSSLSSCTSGILEER 16 0 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DSS(0.013)S(0.953)LS(0.024)S(0.008)CT(0.001)S(0.002)GILEER;DS(0.001)S(0.042)S(0.849)LS(0.084)S(0.025)CTSGILEER 220.72 7.78E-11 10735100 26677 36432 32504 42915 38083 40216 47556 36451 36815 40877 TRUE FALSE 28719.41163 34622.83986 33587.66714 39408.70722 36587.67007 41746.44806 41311.84008 41215.27085 40017.10215 39543.18684 0.726279643 0.875570297 0.849392015 0.996599171 0.925258508 1.055717847 1.044727129 1.042285009 1.011984753 1 15.27114152 -4.727996257 0.552990163 1.03680306 0.529265625 0.842481266 0.040362952 1.517823865 0.339047472 0.021806922 0.504925258 1.87E-05 4.727996257 -0.507537435 DSSS(ph)SLTDPQVSYVK ddPTM_A459_MK2206_30min_R2 1 DSSSSLTDPQVSYVK 15 0 O94887-3;O94887-2;O94887;H7C3M7 O94887-3 FARP2 "FERM, RhoGEF and pleckstrin domain-containing protein 2" 1 DSSS(0.924)S(0.076)LTDPQVSYVK 247.9 6.72E-28 5485000 58850 49778 46618 52860 49958 38552 55360 45030 40461 46316 TRUE FALSE 63355.60125 47306.0969 48172.22085 48541.16891 47996.3979 40019.12337 48091.1655 50915.57561 43980.22464 44804.71271 1.414038779 1.055828596 1.075159686 1.083394267 1.071235479 0.893190045 1.073350605 1.136388842 0.981598184 1 15.45136287 -4.760801046 6.103273164 1.044279371 1.427118917 0.75214011 0.064232538 0.066580317 9.938214448 0.016315041 0.1064758 1.73E-05 4.760801046 0.382839546 DSSSLS(ph)SCTSGILEER ddPTM_A459_MK2206_30min_R1 1 DSSSLSSCTSGILEER 16 0 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DSS(0.008)S(0.231)LS(0.586)S(0.173)CT(0.002)SGILEER 185.86 7.84E-07 6686800 1482.7 1231.2 1338.4 1307.9 1138.2 1500.6 1644.1 1053.8 1050.5 915.93 TRUE FALSE 1356.588579 1151.048656 1247.553137 1408.634685 1092.863084 1585.562675 1534.425089 1044.586738 1159.703234 1029.402323 1.317840992 1.118171807 1.211919877 1.36840053 1.061648161 1.540275011 1.490598043 1.014750709 1.126579189 1 10.00759123 -10.27448722 6.292414076 0.999999995 1.251656385 0.164474736 0.169018424 8.72E-09 1.81E-09 0.169431897 0.04109327 5.32E-11 10.27448722 0.251656391 DSSSLSSCTSGILEERS(ph)PAFR ddPTM_A459_MK2206_30min_R1 2 DSSSLSSCTSGILEERSPAFR 21 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DSS(0.001)S(0.001)LS(0.025)S(0.025)CT(0.007)S(0.007)GILEERS(0.933)PAFR;DSSSLSSCTSGILEERS(1)PAFR 125.61 3.76E-05 21568600 2838.42 2844.39 2807.25 2394.58 2695.65 2881.26 2971.71 2419.3 2284.08 2418.69 TRUE FALSE 2596.997474 2659.219694 2616.701691 2579.010967 2588.276552 3044.394451 2773.472648 2398.148315 2521.51829 2718.335577 0.955363089 0.978252912 0.962611722 0.948746353 0.952154905 1.119947985 1.020283394 0.882212018 0.927596398 1 11.40850785 -10.07074788 0.002720216 1.250898509 0.705026821 0.00240093 0.060178955 1957064.799 1218.45116 123889.7472 120626.5136 8.50E-11 10.07074788 -0.545871688 DSSSLSSCTSGILEERS(ph)PAFR ddPTM_A459_MK2206_30min_R2 4 DSSSLSSCTSGILEERSPAFR 21 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DSSSLSSCTSGILEERS(1)PAFR;DSSSLSSCTSGILEERS(0.999)PAFR;DSSSLSSCTSGILEERS(1)PAFR;DSSSLSSCTSGILEERS(1)PAFR 119.28 4.11E-05 40611400 39061.9 57063 45814.2 57512 62699 63197 65048 39106.8 59231 49335 TRUE FALSE 42052.5091 54229.3344 47341.62256 52813.08563 60237.12222 65602.00612 56507.11946 44218.19303 64382.80531 47725.20299 0.881138402 1.136282949 0.991962728 1.106607878 1.262165867 1.374577833 1.184010039 0.926516605 1.349031566 1 15.54246371 -3.805366426 0.741349459 1.17620254 2.53E-11 0.247570112 0.141815017 15.28128878 2.17157821 0.055669117 20.9538281 0.000156543 3.805366426 -1.17620254 DSSSLSSCTSGILEERS(ph)PAFRGPDR ddPTM_A459_MK2206_30min_R2 1 DSSSLSSCTSGILEERSPAFRGPDR 25 2 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DSSSLSS(0.003)CT(0.003)S(0.004)GILEERS(0.99)PAFRGPDR 61.361 0.0022517 7451100 23164 45071 34853 43604 49692 37785 40049 30137 49145 39445 TRUE FALSE 24937.45365 42832.83968 36014.98162 40041.41372 47740.8424 39222.93465 34790.51819 34076.00938 53419.54327 38157.91288 0.653532957 1.122515265 0.943840449 1.049360688 1.251138723 1.027910902 0.911751078 0.893026028 1.399959779 1 15.21969464 -4.755910706 24.99402064 1.058610528 0.653532312 0.405512871 0.149763677 184.8530285 835595.6343 0.036757826 0.312741109 1.75E-05 4.755910706 -0.405078216 DSSSS(ph)LTDPQVSYVK ddPTM_A459_MK2206_30min_R2 1 DSSSSLTDPQVSYVK 15 0 O94887-3;O94887-2;O94887;H7C3M7 O94887-3 FARP2 "FERM, RhoGEF and pleckstrin domain-containing protein 2" 1 DSSS(0.015)S(0.985)LTDPQVSYVK 298.78 1.71E-80 5356300 40147 39716 36597 35715 33026 26639 44124 33280 33341 41039 TRUE FALSE 43220.68519 37743.76119 37817.12571 32796.97025 31729.2333 27652.76581 38330.4658 37629.81027 36240.93991 39699.90079 1.088684967 0.950726839 0.952574817 0.826122222 0.799227017 0.69654496 0.96550533 0.947856532 0.912872304 1 15.27684778 -4.789030747 1.370329817 0.872660978 1.170883527 0.334627272 0.086606884 1.525976291 2.586504938 0.027253317 0.63486038 1.63E-05 4.789030747 0.298222549 DSSSSLTDPQVSYVKS(ph)PAAER ddPTM_A459_MK2206_30min_R1 2 DSSSSLTDPQVSYVKSPAAER 21 1 O94887-3;O94887-2;O94887;H7C3M7 O94887-3 FARP2 "FERM, RhoGEF and pleckstrin domain-containing protein 2" 1 DSSSSLTDPQVS(0.006)Y(0.025)VKS(0.969)PAAER;DSSSSLTDPQVSYVKS(1)PAAER 140.13 1.13E-05 81963000 13474 13782.8 14656.7 13296 14287.2 12957.3 12890.5 14910.1 11127.1 8198.9 TRUE FALSE 12327.96555 12885.53721 13661.84404 14320.06022 13718.11057 13690.93113 12030.59827 14779.74257 12283.80186 9214.641631 1.337867064 1.398376381 1.48262348 1.554055035 1.488729689 1.485780096 1.305595893 1.603941115 1.333074292 1 13.16971234 -8.542746171 21.61693697 0.999999996 1.456971341 0.720150982 0.086055594 341.7402608 371834.0709 0.082352897 0.021263426 2.87E-09 8.542746171 0.456971344 DSSSSLTDPQVSYVKS(ph)PAAER ddPTM_A459_MK2206_30min_R2 2 DSSSSLTDPQVSYVKSPAAER 21 1 O94887-3;O94887-2;O94887;H7C3M7 O94887-3 FARP2 "FERM, RhoGEF and pleckstrin domain-containing protein 2" 1 DSSSSLTDPQVS(0.207)Y(0.049)VKS(0.744)PAAER;DSSSSLTDPQVS(0.001)Y(0.004)VKS(0.995)PAAER 82.541 0.00084987 54462000 166661 258433 237667 277509 272611 244802 295907 215699 256658 236432 TRUE FALSE 179420.6943 245599.593 245590.6992 254835.627 261906.9224 254118.1117 257054.0555 243891.5999 278981.6489 228717.2432 0.784465097 1.073813192 1.073774306 1.11419508 1.145112274 1.111057951 1.123894516 1.066345486 1.219766577 1 17.80320561 -4.548480252 2.000155521 1.112525267 0.488636341 0.756733058 0.054270525 0.767898643 1.884180635 0.013375057 1.097351677 2.83E-05 4.548480252 -0.623888926 DSSST(ph)DSANEKPALIPR ddPTM_A459_MK2206_30min_R1 1 DSSSTDSANEKPALIPR 17 1 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3;F2Z2S1;C9JKE4;F8VZ02;F8VT91;C9JGM8;F8W6C2;C9JW67 B8ZZZ7;C9JW67 SPATS2L SPATS2-like protein 1 DS(0.001)S(0.019)S(0.094)T(0.678)DS(0.208)ANEKPALIPR 98.253 0.0072868 12457000 3895.6 4221.1 3985.3 3847.4 5450.7 4207.7 4527.1 3905.4 4108 3807.2 TRUE FALSE 3564.258763 3946.305623 3714.78894 4143.727415 5233.587077 4445.936338 4225.105419 3871.2555 4535.041301 4278.864679 0.8329917 0.922278669 0.868171634 0.968417495 1.223125167 1.039045792 0.987436093 0.904738941 1.059870232 1 12.06301234 -5.948482719 5.44651024 1.034297799 0.882560789 0.458763061 0.078091917 0.197401812 12.83351812 0.023994987 0.03573639 1.13E-06 5.948482719 -0.15173701 DSSSTDS(ph)ANEKPALIPR ddPTM_A459_MK2206_30min_R1 1 DSSSTDSANEKPALIPR 17 1 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3;F2Z2S1;C9JKE4;F8VZ02;F8VT91;C9JGM8;F8W6C2;C9JW67 B8ZZZ7;C9JW67 SPATS2L SPATS2-like protein 1 DS(0.012)S(0.049)S(0.004)T(0.133)DS(0.803)ANEKPALIPR 81.788 0.0083009 9025000 2799.9 2656.8 2769.3 2514.5 2956.3 2846.6 3206.1 3318.4 2793.2 2685.2 TRUE FALSE 2561.753802 2483.841837 2581.327632 2708.167226 2838.544311 3007.772032 2992.226919 3289.387579 3083.563136 3017.862848 0.84886356 0.823046627 0.855349551 0.897379159 0.940580952 0.996656304 0.99150527 1.089972522 1.021770468 1 11.55931153 -6.42843486 0.94425678 1.038452168 0.830822081 0.905581788 0.025558096 0.148141504 0.285692766 0.012886086 0.016961397 3.73E-07 6.42843486 -0.207630087 DSSVPGS(ph)PSSIVAK ddPTM_A459_MK2206_30min_R1 3 DSSVPGSPSSIVAK 14 0 Q08495;Q08495-2;E5RGQ0;E5RJ61;A0A087WT94 Q08495 DMTN Dematin 1 DSSVPGS(0.949)PS(0.04)S(0.01)IVAK;DSS(0.001)VPGS(0.918)PS(0.078)S(0.004)IVAK;DSSVPGS(0.765)PS(0.224)S(0.011)IVAK 209.53 5.11E-06 36879000 16576.5 16417.3 15368.2 11575.1 13441.7 12299 14354.9 13397.7 15185.1 13678.9 TRUE FALSE 15166.58163 15348.53079 14325.0494 12466.61621 12906.28863 12995.35875 13397.31081 13280.56532 16763.64549 15373.5454 0.986537668 0.998372879 0.931798686 0.810913545 0.839512831 0.845306558 0.871452255 0.863858334 1.090421568 1 13.90816229 -8.257418897 24.98607947 1.045210791 0.891353832 0.487662033 0.062183131 296.3927819 1842023.033 0.051535042 0.017842321 5.53E-09 8.257418897 -0.153856959 DSTLIMQLLR ddPTM_A459_MK2206_30min_R1 1 DSTLIMQLLR 10 0 P31947;P31947-2;E7EX29;P63104;B0AZS6;B7Z2E6;H0YB80;P27348;P31946-2;P31946;P63104-2;P61981;P62258;P62258-2;K7EM20;Q04917 P31947;E7EX29;P27348;P31946-2;P63104-2;P61981;P62258;Q04917 SFN;YWHAZ;YWHAQ;YWHAB;YWHAG;YWHAE;YWHAH "14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon;14-3-3 protein eta" 0 160.82 0.0060348 30061000 4552.2 5428.7 3835.4 4132.7 4265.9 4519.6 5461.7 4795.4 4168.7 4881.1 FALSE TRUE 4165.011485 5075.290643 3575.063734 4451.00127 4095.98017 4775.495846 5097.359958 4753.474323 4602.051283 5485.807518 0.759233982 0.925167466 0.651693251 0.81136665 0.746650362 0.870518302 0.92919045 0.86650403 0.838901341 1 12.42148829 -6.889459857 5.272959893 0.897761258 0.782098983 0.40290956 0.074901687 0.236609001 10.04888826 0.026073034 0.022966668 1.29E-07 6.889459857 -0.115662274 DSTLIMQLLR ddPTM_A459_MK2206_30min_R2 1 DSTLIMQLLR 10 0 P31947;P31947-2;E7EX29;P63104;B0AZS6;B7Z2E6;H0YB80;P27348;P31946-2;P31946;P63104-2;P61981;P62258;P62258-2;K7EM20;Q04917 P31947;E7EX29;P27348;P31946-2;P63104-2;P61981;P62258;Q04917 SFN;YWHAZ;YWHAQ;YWHAB;YWHAG;YWHAE;YWHAH "14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon;14-3-3 protein eta" 0 160.82 0.0060348 26224000 35447 45122 33026 32055 27767 35256 46824 38012 23565 33130 FALSE TRUE 38160.84957 42881.30709 34127.07036 29436.00396 26676.72806 36597.69179 40675.95255 42980.29891 25614.6411 32048.97081 1.190704369 1.337993265 1.064841382 0.918469555 0.832373939 1.141930329 1.269181241 1.341082032 0.799234436 1 14.96799041 -5.277769691 22.02992004 1.057299071 1.264348739 0.210058668 0.16829696 261.5136019 352789.1326 0.04736852 0.099324229 5.28E-06 5.277769691 0.207049668 DSYDSYATHNE ddPTM_A459_MK2206_30min_R2 2 DSYDSYATHNE 11 0 Q14011 Q14011 CIRBP Cold-inducible RNA-binding protein 0 ; 170.5 0.0049833 9532500 64611 85222 74651 91507 87539 91340 97580 61004 81956 82778 FALSE TRUE 69557.66784 80989.9994 77139.82708 84030.58538 84101.77901 94816.0077 84767.62879 68977.43226 89084.38474 80076.96064 0.868635214 1.011402016 0.963321116 1.049372812 1.050261877 1.18406102 1.058577 0.86138924 1.11248459 1 16.2890996 -3.763176503 0.945948117 1.042245322 1.32E-13 0.281663377 0.080551458 16.63046488 2.744679625 0.027454663 27.91294465 0.000172514 3.763176503 -1.042245322 DSYESYGNSR ddPTM_A459_MK2206_30min_R1 4 DSYESYGNSR 10 0 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 0 ;;; 194.94 0.0023459 62440000 6032.9 5679.3 5995.3 5196.7 5682 6290.1 5544.6 5071.1 5040.41 4246.68 FALSE TRUE 5519.770175 5309.576538 5588.35574 5596.950734 5455.673908 6646.240026 5174.729851 5026.763907 5564.378657 4772.790779 1.156507886 1.112467901 1.170878004 1.172678836 1.143078371 1.392527 1.084214685 1.053212709 1.165854301 1 12.22061738 -8.497275626 0.864292827 1.010099548 1.177253209 0.256083134 0.08515663 0.919144748 1.531392867 0.084223718 0.029993901 3.18E-09 8.497275626 0.167153661 DSYESYGNSR ddPTM_A459_MK2206_30min_R2 2 DSYESYGNSR 10 0 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 0 ; 145.9 0.012234 31360000 40859 43078 29023 40748 45797 37687 38444 33013 37050 35829 FALSE TRUE 43987.19646 40938.80916 29990.61233 37418.75805 43998.77967 39121.20519 33396.25662 37327.91245 40272.54203 34659.90266 1.269109059 1.181157649 0.865282647 1.079597898 1.269443255 1.128716534 0.963541558 1.07697684 1.161934655 1 15.08097998 -7.215176273 0.014066544 1.13E-06 2.182318831 0.094152664 0.117808394 2667.285543 21.46777049 1623.978837 1702.177885 6.09E-08 7.215176273 2.182317698 DSYS(ph)SSRSDLYSSGR ddPTM_A459_MK2206_30min_R1 2 DSYSSSRSDLYSSGR 15 1 P38159;P38159-2;H3BUY5 P38159 RBMX "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed" 1 DS(0.004)Y(0.009)S(0.686)S(0.006)S(0.006)RS(0.029)DLY(0.247)S(0.013)S(0.001)GR;DS(0.004)Y(0.009)S(0.733)S(0.006)S(0.03)RS(0.045)DLY(0.151)S(0.02)SGR 135.86 0.001937 26717000 5008.9 5049.3 5327 5385.2 6057.3 5763.2 5209.4 4981 4072.5 3012.7 TRUE FALSE 4582.866752 4720.589652 4965.418082 5799.969037 5816.024914 6089.507404 4861.890431 4937.451642 4495.850949 3385.936021 1.353500694 1.394175679 1.466483138 1.71295884 1.717700771 1.7984709 1.435907354 1.458223549 1.327801506 1 11.725339 -8.563464826 1.215774493 1.004247926 1.566280137 0.595220851 0.140821227 0.414078486 1.333022276 0.15216784 0.04724196 2.73E-09 8.563464826 0.56203221 DSYSS(ph)SR ddPTM_A459_MK2206_30min_R2 1 DSYSSSR 7 0 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 1 DSYS(0.211)S(0.788)S(0.001)R 112.41 0.014575 8118900 15638 10582 12376 23833 25243 12056 22688 89305 38622 23966 TRUE FALSE 16835.2573 10056.51327 12788.60966 21885.76766 24251.83298 12514.79953 19709.03835 100977.4701 41981.27175 23183.99138 0.726158711 0.433769712 0.551613803 0.944003442 1.046059437 0.539803493 0.850114116 4.35548256 1.810787067 1 14.50084134 -7.56680499 24.9408237 2.570445557 0.712065761 0.466786612 0.807969718 97.15823488 55164.2791 0.352181933 0.203332468 2.71E-08 7.56680499 -1.858379796 DSYVGDEAQS(ph)K ddPTM_A459_MK2206_30min_R1 4 DSYVGDEAQSK 11 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle" 1 DSYVGDEAQS(1)K;DSYVGDEAQS(1)K;DSYVGDEAQS(1)K;DSYVGDEAQS(1)K 180.3 4.86E-05 53264000 12509.7 15260.6 14767 11585.9 9662.3 9490.4 16264 11266.1 12183.9 13853.3 TRUE FALSE 11445.68432 14267.13217 13764.65718 12478.24803 9277.430131 10027.73825 15179.05824 11167.60168 13450.46001 15569.55139 0.73513257 0.916348314 0.884075388 0.801451995 0.595870099 0.644060834 0.974919434 0.717271898 0.863895155 1 13.92643976 -8.55685445 7.388582056 0.999997159 0.787576275 0.259902199 0.112351054 0.670633229 142.6361747 0.11443125 0.029593466 2.77E-09 8.55685445 -0.212420883 DSYVGDEAQS(ph)K ddPTM_A459_MK2206_30min_R2 1 DSYVGDEAQSK 11 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle" 1 DSYVGDEAQS(1)K 116.58 0.0058482 13701000 63554 54190 46209 63709 57015 41719 83311 41091 26483 70725 TRUE FALSE 68419.7431 51499.0034 47749.585 58503.77091 54776.30462 43306.64578 72372.16563 46461.73479 28786.44347 68417.24904 1.000036454 0.752719586 0.697917348 0.855102649 0.800621267 0.632978472 1.05780584 0.679093875 0.420748333 1 16.06207248 -4.759904218 24.43437977 0.762952532 1.000036846 0.141177723 0.172743768 59.51633933 946865.3442 0.041955526 0.257182432 1.74E-05 4.759904218 0.237084313 DSYVGDEAQS(ph)KR ddPTM_A459_MK2206_30min_R2 2 DSYVGDEAQSKR 12 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle" 1 DSYVGDEAQS(1)KR;DSYVGDEAQS(1)KR 91.845 0.040371 31382000 97923 93152 77579 112012 98441 70671 127449 103477 52735 106726 TRUE FALSE 105420.0602 88526.20714 80165.44514 102860.2613 94575.71171 73360.43443 110714.7932 117001.7992 57321.79498 103243.5394 1.021081424 0.857450332 0.776469362 0.996287631 0.916044842 0.710557144 1.07236534 1.13326025 0.555209511 1 16.65569198 -8.257884414 24.99226157 0.77760478 0.925990779 0.134981979 0.158383828 609.9441613 4288132.985 0.114938761 0.039550966 5.52E-09 8.257884414 0.148385999 DSYVGDEAQSK ddPTM_A459_MK2206_30min_R1 2 DSYVGDEAQSK 11 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle" 0 ; 144.17 0.010788 13025300 4946.6 5853.2 6109.5 5003.4 4386.9 3395.9 4866.8 3883.4 5404.6 5240.4 FALSE TRUE 4525.865694 5472.155616 5694.804162 5388.762735 4212.160484 3588.172923 4542.144652 3849.447843 5966.427511 5889.620315 0.768447786 0.929118572 0.96692212 0.914959275 0.715183706 0.609236713 0.771211794 0.653598643 1.013041112 1 12.52395892 -4.5247661 19.09510466 0.824955785 0.716479015 0.01181923 0.139984941 29704275.86 1243540405 0.036683813 68181006.77 2.99E-05 4.5247661 -0.108476769 DSYVGDEAQSK ddPTM_A459_MK2206_30min_R2 5 DSYVGDEAQSK 11 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle" 0 ;;;; 171.62 0.0040899 97432500 167780.9 179082 157119.4 173563 165911.4 134166.2 204949 149056.4 135653.7 167079.4 FALSE TRUE 180626.3347 170189.0483 162357.6824 159382.3477 159396.8848 139271.9888 178038.9501 168538.5833 147452.6136 161627.6129 1.117546263 1.052970129 1.004516985 0.986108406 0.986198348 0.861684376 1.101537955 1.0427586 0.912298406 1 17.30231417 -4.915245199 1.519443716 0.9859153 1.148258325 0.321488513 0.061397267 1.084195805 2.870346221 0.01810166 0.246916896 1.22E-05 4.915245199 0.162343025 DSYVGDEAQSKR ddPTM_A459_MK2206_30min_R1 5 DSYVGDEAQSKR 12 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle" 0 ;;;; 147.58 0.00084686 773063200 14819.4 16196.16 17579.7 17977.7 16060.9 13893.8 14290.1 17220.3 11245.19 8267.68 FALSE TRUE 13558.93221 15141.78704 16386.43894 19362.34557 15421.16034 14680.45495 13336.8335 17069.74473 12414.16774 9291.942616 1.459213942 1.629560972 1.763510562 2.083777997 1.659627161 1.579912356 1.435311652 1.837048014 1.33601425 1 13.18176453 -8.860301766 0.776014081 0.989718891 1.705580008 0.556744372 0.187574344 0.949743585 1.071134932 0.199868641 0.069663779 1.38E-09 8.860301766 0.715861117 DSYVGDEAQSKR ddPTM_A459_MK2206_30min_R2 4 DSYVGDEAQSKR 12 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle" 0 ;;; 126.12 0.0037616 593184000 245938 541271 431742 487393 582100 491010 506210 332092 537600 387705 FALSE TRUE 264767.2024 514392.2692 446136.0628 447571.4328 559243.8292 509695.7296 439744.0189 375497.5646 584359.4762 375054.2176 0.705943807 1.371514424 1.189524186 1.193351286 1.491101294 1.358992129 1.1724812 1.001182088 1.558066671 1 18.51673964 -4.754580563 24.9952402 1.262977258 0.705942854 0.465804927 0.177832509 209.7314092 764245.689 0.042846824 0.4129073 1.76E-05 4.754580563 -0.557034405 DT(ph)GSPPASEGPTDGSR ddPTM_A459_MK2206_30min_R1 1 DTGSPPASEGPTDGSR 16 0 Q969R8 Q969R8 ITFG2 Integrin-alpha FG-GAP repeat-containing protein 2 1 DT(0.605)GS(0.395)PPASEGPTDGSR 132.51 0.0014341 4697400 1055 1317.8 1661.4 1387.4 1367.2 1566.3 1406.2 1428 1462.6 1497.2 TRUE FALSE 965.26671 1232.01098 1548.628797 1494.257788 1312.741529 1654.982552 1312.394964 1415.515147 1614.642504 1682.684439 0.573646899 0.732169949 0.920332274 0.88802021 0.780147185 0.983537087 0.779941226 0.841224364 0.959563461 1 10.71654893 -4.958740312 2.646061707 0.88310369 0.56158822 0.653136286 0.074188366 0.202507114 2.440183881 0.018733491 0.122234917 1.10E-05 4.958740312 -0.32151547 DT(ph)HEDHDTSTENTDESNHDPQFEPIVSLPEQEIK ddPTM_A459_MK2206_30min_R2 1 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK 34 0 C9JJ34;P43487-2;P43487 C9JJ34 RANBP1 Ran-specific GTPase-activating protein 1 DT(0.2)HEDHDT(0.172)S(0.172)T(0.172)ENT(0.074)DES(0.179)NHDPQFEPIVS(0.03)LPEQEIK 41.434 0.0156 5301700 5997.5 10616 7883.1 13785 10627 12091 13857 9486.8 10249 13255 TRUE FALSE 6456.673211 10088.82488 8145.91862 12658.7214 10209.73058 12551.13148 12037.55925 10726.75733 11140.43949 12822.49044 0.503542837 0.786806972 0.635283657 0.987227986 0.796236163 0.978837266 0.938784811 0.83655803 0.868820262 1 13.64638887 -4.264312375 0.63835035 0.915716496 3.34E-12 0.639588119 0.092333607 3.874921673 0.743356405 0.039909566 3.003647063 5.44E-05 4.264312375 -0.915716496 DT(ph)PGHGSGWAETPR ddPTM_A459_MK2206_30min_R2 1 DTPGHGSGWAETPR 14 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 DT(1)PGHGSGWAETPR 85.271 0.033639 4292600 21749 35425 41909 49808 52842 61995 70484 39638 53938 42472 TRUE FALSE 23414.12016 33665.84601 43306.22514 45738.52707 50767.15757 64354.26317 61229.36613 44818.8227 58629.42974 41086.14212 0.569878771 0.819396621 1.054034838 1.113234894 1.235627269 1.566325283 1.49026808 1.090850111 1.426987951 1 15.32636425 -5.18023812 0.940348447 1.326050249 0.424080394 0.675574242 0.166429918 0.716901563 0.759827364 0.061240642 0.580376142 6.60E-06 5.18023812 -0.901969855 DT(ph)PTSAGPNSFNK ddPTM_A459_MK2206_30min_R2 1 DTPTSAGPNSFNK 13 0 Q8WW12;Q8WW12-3 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 1 DT(0.97)PT(0.024)S(0.007)AGPNSFNK 124.81 0.0051253 5271900 38609 31522 30878 28972 22163 16423 26689 24363 19147 32193 TRUE FALSE 41564.93473 29956.66332 31907.45711 26604.89492 21292.76926 17047.98877 23184.70224 27547.32775 20812.37145 31142.54505 1.334667243 0.961920847 1.024561643 0.854294178 0.683719626 0.547417969 0.744470377 0.884556086 0.668293854 1 14.92659923 -4.609558855 0.809427405 0.745323205 1.754898952 0.6246473 0.131517218 2.107279582 0.879045632 0.050402031 2.041976172 2.46E-05 4.609558855 1.009575748 DT(ph)SPSSGSAVSSSK ddPTM_A459_MK2206_30min_R2 3 DTSPSSGSAVSSSK 14 0 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;Q8NEY8-7 F8WF16 PPHLN1 Periphilin-1 1 DT(0.911)S(0.088)PSSGSAVSSSK;DT(0.908)S(0.091)PSSGSAVSSSK;DT(0.916)S(0.084)PSSGSAVSSSK 198.48 0.00021745 83849200 88743 107044 107453 115839 112539 94319 123084 92943 101682 113579 TRUE FALSE 95537.23231 101728.3506 111035.4294 106374.5831 108120.1534 97908.37564 106922.9229 105090.9692 110526.1166 109872.9265 0.86952478 0.925872768 1.01058043 0.968160096 0.98404727 0.891105559 0.973150769 0.956477383 1.005944959 1 16.74547641 -4.939036245 3.702279122 0.969457614 0.871706182 0.498360653 0.03259058 0.20407126 5.386308709 0.008367026 0.043050094 1.15E-05 4.939036245 -0.097751432 DTAAWTVGR ddPTM_A459_MK2206_30min_R1 1 DTAAWTVGR 9 0 Q14974;Q14974-2;J3KTM9;J3QKQ5 Q14974;J3QKQ5 KPNB1 Importin subunit beta-1 0 132.76 0.045517 3197400 658.97 560.91 848.57 689.86 667.42 639.52 802.29 818.75 634.88 529.31 FALSE TRUE 602.9211411 524.3946571 790.9714327 742.9931367 640.8352481 675.7290697 748.770698 811.5917551 700.8780479 594.8849189 1.013508869 0.881506053 1.329620919 1.248969529 1.077242384 1.135898807 1.258681594 1.364283627 1.178174174 1 9.216466794 -5.25411961 24.9171385 1.209417467 0.947507443 0.458025685 0.10901522 455.5207505 1550623.123 0.028102737 0.071128354 5.57E-06 5.25411961 -0.261910024 DTASLSTTPSES(ph)PR ddPTM_A459_MK2206_30min_R1 2 DTASLSTTPSESPR 14 0 H0YJ30;G3V582;F5H039;Q9NQX3;Q9NQX3-2 H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase 1 DTASLSTTPS(0.002)ES(0.998)PR;DTASLSTTPS(0.005)ES(0.995)PR 249.82 1.92E-27 24985000 3880.9 2877.47 3087.5 2538.4 3238.3 2983.7 3238.8 3049.7 2607.1 2228.24 TRUE FALSE 3550.809076 2690.14618 2877.929102 2733.908008 3109.311654 3152.634516 3022.745562 3023.036794 2878.117375 2504.291194 1.417889854 1.074214607 1.149199067 1.091689343 1.241593494 1.258892945 1.207026391 1.207142685 1.149274247 1 11.29018661 -8.697832038 2.652798106 1.000060245 1.198676227 0.315178403 0.091163807 0.945020811 11.76569703 0.086204905 0.023155577 2.01E-09 8.697832038 0.198615982 DTCY(ph)SPKPSVYLSTPSSASK ddPTM_A459_MK2206_30min_R2 1 DTCYSPKPSVYLSTPSSASK 20 1 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 DT(0.14)CY(0.43)S(0.43)PKPSVYLSTPSSASK 83.666 0.025654 26863000 57154 57724 52323 43155 47246 41341 48521 44234 37112 52084 TRUE FALSE 61529.75418 54857.5101 54067.42271 39629.09845 45390.88465 42914.26072 42150.13442 50015.53568 40339.93468 50384.50335 1.221203944 1.088777431 1.073096272 0.786533474 0.90088979 0.851735313 0.836569414 0.992676961 0.800641705 1 15.62069245 -5.609937705 4.807449404 0.879224631 1.139268165 0.703300545 0.074282662 0.105889488 4.254819662 0.019555228 0.034988434 2.46E-06 5.609937705 0.260043534 DTCYS(ph)PKPSVYLSTPSSASK ddPTM_A459_MK2206_30min_R1 2 DTCYSPKPSVYLSTPSSASK 20 1 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 DT(0.136)CY(0.151)S(0.71)PKPS(0.002)VYLSTPSSASK;DT(0.085)CY(0.051)S(0.786)PKPS(0.074)VY(0.002)LS(0.001)T(0.001)PSSASK 78.552 0.0026646 53029000 9676.1 9314.4 8819.7 7501.6 6915.4 5752.8 6647.3 7158.6 7325.2 6404.9 TRUE FALSE 8853.096884 8708.030867 8221.043337 8079.374532 6639.944974 6078.518565 6203.870746 7096.013115 8086.680753 7198.387367 1.229872252 1.209719681 1.142067371 1.12238674 0.922421181 0.844427822 0.861841747 0.985778169 1.123401721 1 12.81345802 -6.075284892 2.644182018 0.945224746 1.19546596 0.666211363 0.0769063 0.180553224 2.482651481 0.026498955 0.03783475 8.41E-07 6.075284892 0.250241215 DTCYS(ph)PKPSVYLSTPSSASK ddPTM_A459_MK2206_30min_R2 1 DTCYSPKPSVYLSTPSSASK 20 1 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 DT(0.3)CY(0.07)S(0.619)PKPS(0.009)VY(0.001)LST(0.001)PSSASK 66.52 0.0085688 24113000 120330 118550 106510 108640 102260 83298 107020 84575 73320 112550 TRUE FALSE 129542.5573 112662.9794 110060.9902 99763.76448 98244.75858 86467.96376 92968.14545 95629.24289 79697.24107 108877.5027 1.189800961 1.034768217 1.0108699 0.916293651 0.902342138 0.794176589 0.853878378 0.878319584 0.73198998 1 16.73234636 -4.935535447 0.703673391 0.842969399 1.334131949 0.704663091 0.068087803 1.303119516 0.563696693 0.028491496 0.49358547 1.16E-05 4.935535447 0.49116255 DTDFEHR ddPTM_A459_MK2206_30min_R1 2 DTDFEHR 7 0 P17858;P17858-2 P17858 PFKL "ATP-dependent 6-phosphofructokinase, liver type" 0 ; 129.68 0.0064026 3172700 6293.2 6226.7 5961.6 5322.2 5301.8 5510.5 6799.6 6237.1 1718.64 5274.7 FALSE TRUE 5757.930293 5821.340698 5556.943202 5732.116766 5090.618079 5822.499748 6346.011091 6182.569692 1897.298778 5928.169658 0.97128298 0.981979436 0.937379246 0.966928596 0.858716665 0.982174952 1.070484054 1.042913757 0.320047989 1 12.53337102 -8.216029779 24.9972514 0.660022183 0.974441446 0.38122071 0.161254167 351.1158264 193284.0604 0.0994491 0.037587947 6.08E-09 8.216029779 0.314419263 DTDFEHR ddPTM_A459_MK2206_30min_R2 4 DTDFEHR 7 0 P17858;P17858-2 P17858 PFKL "ATP-dependent 6-phosphofructokinase, liver type" 0 ;;; 129.68 0.0064026 11109300 140579 167437 155410 182780 163382 164181 161293 144171 158530 157374 FALSE TRUE 151341.8363 159122.3221 160591.2918 167846.2893 156966.8018 170429.023 140115.0354 163014.6447 172318.6528 152238.8993 0.994107531 1.045214612 1.054863721 1.102519068 1.031055811 1.119484073 0.920362903 1.070781814 1.13189634 1 17.21597751 -4.757168724 3.23894415 1.054729154 0.983541773 0.084637106 0.058566667 0.992531662 15.32180688 0.014625572 0.185881382 1.75E-05 4.757168724 -0.07118738 DTDGGPKEEES(ph)PV ddPTM_A459_MK2206_30min_R2 1 DTDGGPKEEESPV 13 1 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 DTDGGPKEEES(1)PV 104.7 0.035859 8558000 77889 24560 45982 35238 35500 34815 82315 35340 55835 65325 TRUE FALSE 83852.24173 23340.38611 47515.01693 32358.94268 34106.09163 36139.90922 71506.94162 39959.05934 60691.42737 63193.4506 1.326913484 0.369348182 0.751897807 0.512061652 0.539709278 0.571893272 1.131556213 0.632329125 0.960406922 1 15.94748742 -7.236977085 24.87035585 0.900433885 0.654022173 0.167734284 0.26873313 1305.013907 1326784.761 0.098006587 0.075878342 5.79E-08 7.236977085 -0.246411712 DTDSEEEIR ddPTM_A459_MK2206_30min_R1 3 DTDSEEEIR 9 0 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2;A0A590UJC0;G3V226 P0DP25 CALM2;CALM1 0 ;; 197.3 0.011827 48504800 12067.3 13113 12322 9771.2 11239.2 10241.1 12651.2 10831.3 12407.6 12172.7 FALSE TRUE 11040.91277 12259.34132 11485.61697 10523.77952 10791.51886 10820.94223 11807.26153 10736.60309 13697.41442 13680.74598 0.807040258 0.896101816 0.839546103 0.769240182 0.788810704 0.790961418 0.86305685 0.784796612 1.001218387 1 13.73985928 -8.267939948 24.89564829 1.000609237 0.818879296 0.7955341 0.037137848 238.2301336 912351.1393 0.034866094 0.009858733 5.40E-09 8.267939948 -0.181729941 DTDSEEEIR ddPTM_A459_MK2206_30min_R2 1 DTDSEEEIR 9 0 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2;A0A590UJC0;G3V226 P0DP25 CALM2;CALM1 0 166.52 0.012507 30951000 178940 178780 166570 203450 201180 213380 221590 183240 159230 211640 FALSE TRUE 192639.784 169902.0452 172123.3607 186827.4842 193280.6624 221500.3254 192494.9668 207190.0972 173079.5376 204734.2041 0.940926236 0.82986644 0.840716193 0.912536745 0.94405653 1.081892136 0.940218893 1.011995519 0.845386526 1 17.64339262 -6.167371114 2.739020171 0.976422542 0.867935701 0.338429681 0.063187932 0.299619087 4.381010671 0.019709435 0.026428204 6.80E-07 6.167371114 -0.108486841 DTDSEEEIREAFR ddPTM_A459_MK2206_30min_R1 4 DTDSEEEIREAFR 13 1 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2;A0A590UJC0;G3V226 P0DP25 CALM2;CALM1 0 ;;; 172.61 0.0004822 260690000 9505.38 9194.39 8983.5 9911.31 11606.62 8944.61 7786.36 10555.38 4484.95 2545.6 FALSE TRUE 8696.897516 8595.83354 8373.725049 10674.68081 11144.30375 9451.046088 7266.946131 10463.09543 4951.176602 2860.968146 3.039844232 3.004519135 2.926885104 3.73114284 3.895291097 3.303443312 2.540030423 3.65718697 1.730594802 1 11.48228772 -8.424750174 3.764471171 1.017108957 3.254307583 0.791209042 0.397110812 0.097252052 2.405043989 0.40486516 0.106822402 3.76E-09 8.424750174 2.237198625 DTDSEEEIREAFR ddPTM_A459_MK2206_30min_R2 2 DTDSEEEIREAFR 13 1 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2;A0A590UJC0;G3V226 P0DP25 CALM2;CALM1 0 ; 136.81 0.0030279 77706000 124836 333569 204285 268799 319060 364800 257739 212276 390760 212195 FALSE TRUE 134393.5401 317004.4485 211095.7599 246837.2619 306532.1013 378682.7196 223897.5597 240021.2021 424747.5985 205271.0945 0.654712445 1.544320934 1.028375478 1.202494011 1.493303779 1.844793201 1.090740809 1.16928885 2.069203165 1 17.64717096 -6.153225259 4.359763927 1.454664432 1.122571119 0.168957339 0.368629244 0.455988031 14.47003771 0.108236039 0.142065297 7.03E-07 6.153225259 -0.332093313 DTEEPLPVKESDQTLAALLS(ph)PK ddPTM_A459_MK2206_30min_R1 4 DTEEPLPVKESDQTLAALLSPK 22 1 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 DTEEPLPVKESDQT(0.001)LAALLS(0.999)PK;DTEEPLPVKES(0.008)DQT(0.127)LAALLS(0.865)PK;DTEEPLPVKESDQTLAALLS(1)PK;DTEEPLPVKESDQTLAALLS(1)PK 121.56 1.79E-05 72941300 11219.02 13802.97 13861.8 17513.21 10459.53 6975.74 6931.21 13214.05 5780.96 2426.92 TRUE FALSE 10264.78344 12904.39414 12920.89964 18862.08047 10042.90477 7370.70037 6468.841628 13098.52095 6381.911479 2727.585172 3.763322789 4.731069181 4.737120501 6.915303934 3.681976598 2.702280554 2.371636895 4.802240857 2.339766158 1 11.41340853 -6.511039766 20.0319921 2.900324094 5.031621409 0.484478979 1.148711422 39.07156385 66111.53203 0.363035254 0.389592856 3.08E-07 6.511039766 2.131297315 DTEEPLPVKESDQTLAALLS(ph)PK ddPTM_A459_MK2206_30min_R2 2 DTEEPLPVKESDQTLAALLSPK 22 1 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 DTEEPLPVKESDQTLAALLS(1)PK;DTEEPLPVKESDQTLAALLS(1)PK 98.067 9.51E-05 11089800 12528.4 65345 48453 45705 83726 45189 68028 29708 78685 36835 TRUE FALSE 13487.58394 62100.06232 50068.39884 41970.7553 80438.49655 46908.69906 59095.84188 33590.9376 85528.87907 35633.07697 0.37851303 1.742764521 1.40511017 1.177859418 2.257410906 1.316436947 1.658454641 0.942689783 2.400266448 1 15.12092945 -4.755483469 24.86776209 1.545654411 0.378510993 0.361918462 0.464478985 191.6968311 800308.4842 0.106678933 0.938816974 1.76E-05 4.755483469 -1.167143418 DTFEHDPSES(ph)IDEFNK ddPTM_A459_MK2206_30min_R2 1 DTFEHDPSESIDEFNK 16 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 DTFEHDPS(0.004)ES(0.996)IDEFNK 124.77 0.000834 5884800 58127 50540 52569 46303 40960 43156 51740 40455 44859 51562 TRUE FALSE 62577.24781 48030.25709 54321.62422 42519.89678 39351.70459 44798.33182 44946.47585 45742.6074 48760.75473 49879.53616 1.254567557 0.962925095 1.089056323 0.852451728 0.788934854 0.898130481 0.901100518 0.917061603 0.977570332 1 15.60616043 DTGKTPVEPEVAIHR ddPTM_A459_MK2206_30min_R1 1 DTGKTPVEPEVAIHR 15 1 P60866;P60866-2;E5RIP1;E5RJX2 P60866 RPS20 40S ribosomal protein S20 0 93.228 0.010106 4249400 9697.4 9528.5 9796.7 10157 11063 8681.1 8420.2 10223 5410.9 3498.6 FALSE TRUE 8872.585207 8908.192918 9131.727299 10939.2939 10622.33728 9172.61638 7858.503822 10133.62139 5973.382418 3932.032981 2.256487992 2.265543794 2.322393363 2.782096171 2.701487331 2.33279233 1.998585429 2.577196437 1.519158778 1 11.94105971 -8.441433668 3.271489849 1.006503317 2.404033281 0.816653789 0.222940362 0.09540581 1.99881771 0.231489793 0.061623219 3.62E-09 8.441433668 1.397529963 DTGKTPVEPEVAIHR ddPTM_A459_MK2206_30min_R2 1 DTGKTPVEPEVAIHR 15 1 P60866;P60866-2;E5RIP1;E5RJX2 P60866 RPS20 40S ribosomal protein S20 0 100.22 0.0061551 5536000 20127 52331 38925 57313 63041 58359 56198 42658 58217 38575 FALSE TRUE 21667.9386 49732.31864 40222.74007 52630.34456 60565.69358 60579.89264 48819.13509 48233.54707 63280.60943 37316.30091 0.580656123 1.3327237 1.077886583 1.410384826 1.623035834 1.62341634 1.308252263 1.29255971 1.695789987 1 15.18751836 -4.558369163 1.261116977 1.425545407 1.38E-25 0.524002591 0.222008528 1.842555636 1.778217606 0.064514069 3.899643062 2.76E-05 4.558369163 -1.425545407 DTGS(ph)PPASEGPTDGSR ddPTM_A459_MK2206_30min_R1 1 DTGSPPASEGPTDGSR 16 0 Q969R8 Q969R8 ITFG2 Integrin-alpha FG-GAP repeat-containing protein 2 1 DT(0.077)GS(0.923)PPASEGPTDGSR 218.21 1.14E-10 5441900 996.58 1072.1 1066.3 1012.8 862.49 768.41 1140.7 949.11 963.07 899.61 TRUE FALSE 911.8156378 1002.306095 993.9225269 1090.806031 828.1351969 811.9167102 1064.605984 940.8120313 1063.184573 1011.060479 0.901840846 0.991341385 0.983049529 1.078873178 0.819075826 0.803034761 1.052959746 0.930520034 1.051553884 1 9.981653582 DTGS(ph)PPASEGPTDGSR ddPTM_A459_MK2206_30min_R2 3 DTGSPPASEGPTDGSR 16 0 Q969R8 Q969R8 ITFG2 Integrin-alpha FG-GAP repeat-containing protein 2 1 DT(0.001)GS(0.998)PPAS(0.001)EGPTDGSR;DTGS(0.998)PPAS(0.002)EGPTDGSR;DT(0.291)GS(0.65)PPAS(0.036)EGPT(0.022)DGS(0.002)R 128.74 0.00073223 5557100 23826.2 23324.7 27163.3 31773.3 27037.1 23152.3 30559.8 19971.9 22999.2 29739.2 TRUE FALSE 25650.35219 22166.42932 28068.91086 29177.31975 25975.4876 24033.377 26547.26155 22582.2959 24999.62884 28768.81234 0.89160275 0.770502065 0.97567152 1.014199662 0.902904412 0.835396912 0.922779197 0.784957531 0.868983695 1 14.81221804 -9.352662567 15.00540012 0.999957522 0.885511898 0.18410623 0.072485092 0 0 0.074501612 0.018069295 4.44E-10 9.352662567 -0.114445624 DTHDQLSEPSEVR ddPTM_A459_MK2206_30min_R1 2 DTHDQLSEPSEVR 13 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 198.37 0.00017191 37419000 10677.5 10505.2 10194.6 8712.3 11399.9 10190.5 11485.7 9714 9253.9 7973.3 FALSE TRUE 9769.322555 9821.309571 9502.618956 9383.322856 10945.81784 10767.4773 10719.50991 9629.071522 10215.87602 8961.092599 1.090193238 1.095994653 1.06043084 1.047118167 1.221482506 1.201580855 1.196228004 1.074542129 1.140025718 1 13.12945893 -6.236485414 24.89448595 1.148696443 1.074116868 0.197058162 0.06300145 1096.464127 1093850.675 0.01868189 0.024108075 5.80E-07 6.236485414 -0.074579575 DTHDQLSEPSEVR ddPTM_A459_MK2206_30min_R2 2 DTHDQLSEPSEVR 13 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 161.87 0.00051076 13836100 56726 70642 50677 68968 75121 74495 62793 64404 58553 56370 FALSE TRUE 61068.98617 67134.021 52366.54589 63333.09378 72171.37209 77329.95943 54548.20367 72821.82393 63645.8341 54530.65152 1.119902009 1.231124499 0.96031396 1.161421916 1.323501005 1.41810078 1.000321877 1.335429193 1.167157045 1 15.73477977 -4.731527247 22.61144659 1.18722497 1.119900745 0.009665102 0.147753018 6154.266403 4651346.405 0.036798205 3.294513285 1.86E-05 4.731527247 -0.067324225 DTHEDHDT(ph)STENTDESNHDPQFEPIVSLPEQEIK ddPTM_A459_MK2206_30min_R1 1 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK 34 0 C9JJ34;P43487-2;P43487 C9JJ34 RANBP1 Ran-specific GTPase-activating protein 1 DT(0.002)HEDHDT(0.2)S(0.2)T(0.2)ENT(0.2)DES(0.2)NHDPQFEPIVSLPEQEIK 52.642 0.0029542 14579000 499.66 287.52 479.96 415.27 638.81 477.35 727.96 542.88 400.75 304.92 TRUE FALSE 457.1612932 268.8023957 447.3816524 447.2541674 613.364845 504.3771445 679.3991166 538.1336574 442.4093966 342.6957916 1.334014903 0.784376121 1.305477521 1.305105514 1.789823103 1.471792642 1.982513743 1.570295494 1.29096828 1 8.420784665 -5.795532035 2.1880141 1.563547931 1.069157488 0.248352316 0.287003136 0.343145273 3.353833821 0.083838573 0.155000927 1.60E-06 5.795532035 -0.494390444 DTHEDHDTS(ph)TENTDESNHDPQFEPIVSLPEQEIK ddPTM_A459_MK2206_30min_R2 1 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK 34 0 C9JJ34;P43487-2;P43487 C9JJ34 RANBP1 Ran-specific GTPase-activating protein 1 DT(0.063)HEDHDT(0.095)S(0.305)T(0.305)ENT(0.194)DES(0.035)NHDPQFEPIVS(0.003)LPEQEIK 46.247 0.006866 7584000 5722.1 16123 10399 21725 17467 18419 21562 13619 14892 15103 TRUE FALSE 6160.188376 15322.35527 10745.69747 19949.99801 16781.15782 19119.94795 18730.8835 15399.05006 16187.27924 14610.19035 0.421636422 1.048744397 0.735493325 1.365485153 1.148592689 1.308672064 1.2820424 1.053993801 1.107944445 1 13.83468735 -4.624452931 1.034158321 1.177119734 1.96E-13 0.60222826 0.170352276 1.649049329 1.157499785 0.053455746 2.319856736 2.37E-05 4.624452931 -1.177119734 DTHEDHDTSTENT(ph)DESNHDPQFEPIVSLPEQEIK ddPTM_A459_MK2206_30min_R2 2 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK 34 0 C9JJ34;P43487-2;P43487 C9JJ34 RANBP1 Ran-specific GTPase-activating protein 1 DT(0.004)HEDHDT(0.062)S(0.179)T(0.179)ENT(0.539)DES(0.037)NHDPQFEPIVSLPEQEIK;DT(0.005)HEDHDT(0.047)S(0.082)T(0.257)ENT(0.434)DES(0.175)NHDPQFEPIVSLPEQEIK 67.083 9.15E-05 13568300 20116.6 41725 26827 54277 57307 51128 64235 36794 42174 41421 TRUE FALSE 21656.74236 39652.99717 27721.39879 49842.39548 55056.83924 53073.71187 55800.86734 41603.10213 45842.21829 40069.43616 0.540480337 0.989607066 0.691834012 1.243900595 1.374035787 1.324543516 1.392604256 1.038275207 1.144069462 1 15.29021459 -5.766379057 24.99848824 1.236739443 0.765537093 0.643461919 0.161621908 73.93573513 374172.8806 0.045254323 0.069571062 1.71E-06 5.766379057 -0.47120235 DTHPGSPGS(ph)PGPALRPLPAR ddPTM_A459_MK2206_30min_R1 2 DTHPGSPGSPGPALRPLPAR 20 1 Q8N0Y2-2;Q8N0Y2 Q8N0Y2-2 ZNF444 Zinc finger protein 444 1 DTHPGSPGS(1)PGPALRPLPAR;DTHPGSPGS(1)PGPALRPLPAR 97.57 0.00051087 38920000 4711.1 4347.4 4068.7 3796.3 4649.6 3633.4 4124.4 4277.7 3423.6 3232.8 TRUE FALSE 4310.396206 4064.38347 3792.52798 4088.691684 4464.396586 3839.119968 3849.268801 4240.30052 3779.495471 3633.30367 1.186357265 1.118646785 1.043823562 1.125337174 1.228743037 1.05664715 1.05944043 1.167064717 1.040236604 1 11.82706624 -8.92402681 0.536360821 0.993880258 1.127557702 0.311007827 0.058518944 2.216423203 1.228633249 0.083716325 0.029559244 1.19E-09 8.92402681 0.133677444 DTHPGSPGS(ph)PGPALRPLPAR ddPTM_A459_MK2206_30min_R2 2 DTHPGSPGSPGPALRPLPAR 20 1 Q8N0Y2-2;Q8N0Y2 Q8N0Y2-2 ZNF444 Zinc finger protein 444 1 DTHPGS(0.001)PGS(0.999)PGPALRPLPAR;DTHPGS(0.074)PGS(0.926)PGPALRPLPAR 103.01 0.00033398 41709000 77923 121118 89647 99723 99697 89068 104101 83699 80923 86309 TRUE FALSE 83888.84479 115103.4562 92635.78624 91575.3119 95782.39484 92457.54515 90432.41365 94638.74668 87961.53626 83492.7444 1.00474413 1.378604298 1.109507022 1.096805627 1.147194233 1.107372213 1.083117034 1.133496657 1.053523116 1 16.34936321 -8.011065136 0.227864163 0.969806869 1.207095826 0.196127358 0.090255661 3.504996757 0.842621039 0.327146812 0.309590753 9.75E-09 8.011065136 0.237288957 DTIEEHR ddPTM_A459_MK2206_30min_R1 1 DTIEEHR 7 0 P23381-2;P23381 P23381-2 WARS "Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS" 0 89.142 0.04405 1381600 2637 1838.1 1572.4 1883.7 726.37 1335.6 2201 2910.4 120.4 1276.4 FALSE TRUE 2412.709303 1718.439356 1465.669869 2028.7829 697.4371448 1411.220518 2054.175306 2884.95468 132.9160109 1434.530068 1.681881304 1.197911005 1.021707318 1.41424913 0.486178129 0.98375109 1.431949982 2.011079965 0.09265474 1 10.48636249 -4.766427455 3.277500321 1.094660197 1.774924195 0.121920582 0.495669656 0.80900143 13.18261433 0.123650238 1.442402667 1.71E-05 4.766427455 0.680263998 DTIEEHR ddPTM_A459_MK2206_30min_R2 3 DTIEEHR 7 0 P23381-2;P23381 P23381-2 WARS "Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS" 0 ;; 133.6 0.0044665 28175300 301785 355067 318967 349745 373910 326407 334056 418828 389342 363838 FALSE TRUE 324889.8916 337434.8891 329601.2006 321169.7147 359228.4147 338828.6471 290194.0459 473570.2577 423206.2634 351965.9959 0.923071818 0.958714458 0.936457511 0.912502112 1.020633865 0.962674381 0.824494552 1.345500029 1.202406677 1 18.42507653 -7.758066734 24.99999999 1.20546502 0.938716475 0.605238591 0.091380106 50.78020243 376421.4411 0.042806488 0.02341767 1.75E-08 7.758066734 -0.266748544 DTIIDVVGAPLT(ph)PNSR ddPTM_A459_MK2206_30min_R1 4 DTIIDVVGAPLTPNSR 16 0 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 DTIIDVVGAPLT(1)PNSR;DTIIDVVGAPLT(1)PNSR;DTIIDVVGAPLT(1)PNSR;DTIIDVVGAPLT(1)PNSR 232.01 4.73E-15 205404000 30553.4 30627.6 25663.1 25174.4 26518.4 27862.1 26340.8 22189.6 23741.2 18973.5 TRUE FALSE 27954.67289 28633.73767 23921.16027 27113.33665 25462.11597 29439.62802 24583.65329 21995.59867 26209.1827 21324.08042 1.310943888 1.342788861 1.121790942 1.271489139 1.194054584 1.380581363 1.152858778 1.031491076 1.229088532 1 14.38019591 -14.52287875 0.059625897 0.084132848 1.605604232 0.443924151 0.09069137 387.5804767 1.682620585 50.91970483 8.540933465 3.00E-15 14.52287875 1.521471384 DTIIDVVGAPLT(ph)PNSR ddPTM_A459_MK2206_30min_R2 4 DTIIDVVGAPLTPNSR 16 0 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 DTIIDVVGAPLT(1)PNSR;DTIIDVVGAPLT(0.939)PNS(0.061)R;DTIIDVVGAPLT(0.993)PNS(0.007)R;DTIIDVVGAPLT(0.95)PNS(0.05)R 149.19 0.00062285 91011400 112003 144567 105354 142803 130899 130640 153175 113181 102027 126055 TRUE FALSE 120578.0358 137388.013 108866.4498 131135.5381 125759.2475 135611.5967 133062.9385 127974.1453 110901.124 121941.8357 0.98881598 1.126668401 0.892773585 1.075394161 1.031305186 1.112100667 1.091200061 1.049468746 0.909459198 1 16.89583364 -8.242850527 23.72640042 0.95472961 1.047754091 0.228489223 0.066995867 517.5792882 660630.4419 0.044315922 0.01667086 5.72E-09 8.242850527 0.093024481 DTLENTIGHR ddPTM_A459_MK2206_30min_R1 2 DTLENTIGHR 10 0 H3BS70;Q96DC0;P42126-2;P42126 H3BS70 ECI1;DCI "Enoyl-CoA delta isomerase 1, mitochondrial" 0 ; 158.79 0.00065973 2595400 5018.6 4803.9 4707.8 4084.8 4447.9 4894.2 5088 4447.2 4147.9 4477.3 FALSE TRUE 4591.741716 4491.165237 4388.247653 4399.412004 4270.730724 5171.305375 4748.588804 4408.318599 4579.089048 5031.981726 0.912511604 0.892524155 0.87207146 0.874290139 0.848717455 1.02768763 0.943681647 0.876060137 0.909997154 1 12.29691097 -6.718977841 24.99999959 0.943251894 0.879957236 0.405001522 0.042729996 173.5462659 102177.9293 0.014819416 0.014819286 1.91E-07 6.718977841 -0.063294658 DTLENTIGHR ddPTM_A459_MK2206_30min_R2 1 DTLENTIGHR 10 0 H3BS70;Q96DC0;P42126-2;P42126 H3BS70 ECI1;DCI "Enoyl-CoA delta isomerase 1, mitochondrial" 0 129.88 0.0062207 0 16189 17363 17867 20048 13519 16256 17495 14773 20889 15228 FALSE TRUE 17428.44229 16500.77867 18462.67686 18410.01427 12988.17613 16874.63347 15197.88548 16703.88182 22705.88746 14731.11161 1.183104354 1.120131264 1.253311858 1.249736935 0.88168337 1.145509852 1.031686263 1.133918625 1.541356014 1 13.84657868 -11.09197788 5.834626397 0.999510494 1.159920405 0.088717881 0.160980237 0.001029805 7.61E-05 0.156591133 0.037864668 8.09E-12 11.09197788 0.160409912 DTLSNPQSPQPSPY(ph)NSPKPQHK ddPTM_A459_MK2206_30min_R2 1 DTLSNPQSPQPSPYNSPKPQHK 22 1 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-2;Q96PU5-3;Q96PU5-9;Q96PU5-6;Q96PU5-5 A0A1B0GVY1;Q96PU5-9 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 DT(0.001)LS(0.015)NPQS(0.231)PQPS(0.027)PY(0.536)NS(0.191)PKPQHK 119.76 0.00018707 0 4867.2 5266.4 3863.4 5205.2 5269.5 4195 5646.2 4366 3387.6 4583.7 TRUE FALSE 5239.836574 5004.878234 3992.203828 4779.918509 5062.592953 4354.643665 4904.847158 4936.651191 3682.247325 4434.134244 1.181704542 1.128715992 0.900334453 1.077982363 1.141731999 0.982073033 1.106156667 1.113329213 0.83043208 1 12.11443673 -5.016957653 23.24535563 1.030214758 1.168457562 0.254548077 0.093584762 358.3010486 491166.7364 0.023266037 0.065425305 9.62E-06 5.016957653 0.138242804 DTPGCATT(ph)PPHSQASSVR ddPTM_A459_MK2206_30min_R1 1 DTPGCATTPPHSQASSVR 18 0 Q15572-5;Q15572-4;Q15572-2;Q15572-6;Q15572 Q15572-5 TAF1C TATA box-binding protein-associated factor RNA polymerase I subunit C 1 DTPGCAT(0.014)T(0.986)PPHSQASSVR 83.723 0.011555 7518700 2184.3 1481.1 1769.6 1209 2523 2020.5 2176.2 1940.4 1349.4 1175.9 TRUE FALSE 1998.513815 1384.680121 1649.484482 1302.117389 2422.503567 2134.898964 2031.029669 1923.435287 1489.674959 1321.57937 1.512216262 1.047746471 1.248116095 0.985273696 1.833036761 1.615414869 1.536820047 1.455406563 1.127192958 1 10.36804736 -4.477897341 17.31775745 1.34650111 2.508228672 0.033779471 0.274716494 11055957.11 111537027.4 0.071584613 427609726.5 3.33E-05 4.477897341 1.161727562 DTPGCATT(ph)PPHSQASSVR ddPTM_A459_MK2206_30min_R2 1 DTPGCATTPPHSQASSVR 18 0 Q15572-5;Q15572-4;Q15572-2;Q15572-6;Q15572 Q15572-5 TAF1C TATA box-binding protein-associated factor RNA polymerase I subunit C 1 DTPGCAT(0.062)T(0.938)PPHSQASSVR 80.277 0.015453 7242100 7117.5 11116 10897 12436 13458 13064 15066 8435.7 11207 9934.3 TRUE FALSE 7662.421272 10563.9956 11260.30054 11419.93902 12929.5713 13561.15967 13087.8161 9538.274954 12181.7646 9610.144605 0.797326324 1.099254594 1.171709793 1.188321247 1.34540861 1.411129617 1.361875044 0.992521481 1.267594308 1 13.23034242 -4.379286451 1.190598552 1.2399711 0.142303082 0.47370657 0.133661997 3.090644042 1.960788917 0.041529849 5.29724537 4.18E-05 4.379286451 -1.097668018 DTPGHGSGWAET(ph)PR ddPTM_A459_MK2206_30min_R1 4 DTPGHGSGWAETPR 14 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 DTPGHGSGWAET(1)PR;DTPGHGSGWAET(1)PR;DTPGHGSGWAET(1)PR;DTPGHGS(0.001)GWAET(0.999)PR 132.87 0.0010473 23360100 15930.3 11758.9 11646.9 11468.6 20502 21848.6 20514.6 16478.2 7143.63 9714.3 TRUE FALSE 14575.34433 10993.39347 10856.34088 12351.91356 19685.36193 23085.64885 19146.10847 16334.13283 7886.235902 10917.78082 1.335009794 1.006925643 0.994372488 1.131357531 1.80305524 2.114500119 1.753663018 1.49610375 0.722329568 1 13.41439202 -6.170616633 7.651591713 1.551124043 1.09700667 0.162396917 0.386195936 0.462490846 34.62121898 0.120459055 0.155890596 6.75E-07 6.170616633 -0.454117373 DTPGHGSGWAET(ph)PR ddPTM_A459_MK2206_30min_R2 1 DTPGHGSGWAETPR 14 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 DTPGHGSGWAET(1)PR 127.53 0.0016384 13196000 10654 36060 24751 68479 46877 82415 37801 20868 52885 27593 TRUE FALSE 11469.67843 34269.31284 25576.18599 62884.04665 45036.37344 85551.36058 32837.68329 23595.51925 57484.84171 26692.64267 0.429694376 1.283848634 0.958173617 2.355856909 1.687220482 3.205053978 1.230214771 0.883970896 2.153583758 1 14.70415452 -5.707273314 12.38074054 1.814650155 0.928917334 0.267535396 0.678576537 1.27678747 288.7283355 0.187656841 0.324944683 1.96E-06 5.707273314 -0.885732821 DTPRPDHPPHDGHS(ph)PASR ddPTM_A459_MK2206_30min_R2 3 DTPRPDHPPHDGHSPASR 18 1 Q9C0J8 Q9C0J8 WDR33 pre-mRNA 3 end processing protein WDR33 1 DTPRPDHPPHDGHS(0.871)PAS(0.129)R;DTPRPDHPPHDGHS(0.748)PAS(0.252)R;DTPRPDHPPHDGHS(0.845)PAS(0.155)R 94.384 0.0018228 15053700 16331.2 21325.9 18643 22611.8 21492.3 28157.9 22947.3 17886 19769.1 24744.4 TRUE FALSE 17581.52923 20266.88682 19264.54832 20764.34361 20648.40431 29229.46862 19934.29195 20223.76161 21488.58058 23936.99225 0.734491996 0.846676416 0.804802379 0.867458342 0.862614822 1.221100308 0.832781819 0.844874803 0.897714314 1 14.54695426 -6.184775915 2.416968589 0.945906506 0.804556176 0.280559761 0.107843943 0.45016478 5.156800674 0.036545344 0.049055616 6.53E-07 6.184775915 -0.14135033 DTPRPDHPPHDGHSPASR ddPTM_A459_MK2206_30min_R2 1 DTPRPDHPPHDGHSPASR 18 1 Q9C0J8 Q9C0J8 WDR33 pre-mRNA 3 end processing protein WDR33 0 47.113 0.04719 772300 724.06 1105.2 0 2577.8 2601.8 3873.7 1839.4 1136.6 3130.6 2219.8 FALSE TRUE 779.4945903 1050.317375 0 2367.185494 2499.640259 4021.116368 1597.88457 1285.157523 3402.893929 2147.368108 0.362999985 0.489118457 0 1.102365955 1.16404833 1.872578974 0.744113021 0.598480306 1.584681228 1 11.06835381 -5.778619852 22.38464277 1.149085247 0.304547872 0.542280092 0.36540673 54.40773735 70888.3648 0.106403192 0.1584698 1.66E-06 5.778619852 -0.844537374 DTPSSSMS(ph)SPNGNSSVNR ddPTM_A459_MK2206_30min_R2 1 DTPSSSMSSPNGNSSVNR 18 0 Q9H9J4-2;Q9H9J4;C9JPC9;E7EWZ4 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 DTPSS(0.001)S(0.005)MS(0.497)S(0.497)PNGNSSVNR 121.03 0.00094041 2821900 9436.5 9099.8 7982.1 8991.1 8613.2 8835.7 9875.5 7210.6 6424.5 10385 TRUE FALSE 10158.9657 8647.917164 8248.21923 8256.498369 8275.00249 9171.948755 8578.834987 8153.050178 6983.291397 10046.1383 1.011230922 0.860820039 0.821033813 0.821857924 0.823699838 0.912982529 0.853943548 0.811560615 0.695121965 1 13.29435342 -4.764083092 3.73676177 0.837385754 1.03296814 0.316953123 0.073514791 0.320347593 7.72663454 0.017903902 0.178933184 1.72E-05 4.764083092 0.195582386 DTPTSAGPNS(ph)FNK ddPTM_A459_MK2206_30min_R2 2 DTPTSAGPNSFNK 13 0 Q8WW12;Q8WW12-3 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 1 DTPTSAGPNS(1)FNK;DTPTS(0.001)AGPNS(0.999)FNK 180.27 0.0001118 4913300 50380 50157 52471 37282 38450 33963 66356 43002 40597 52212 TRUE FALSE 54237.13154 47666.27632 54220.35695 34235.94134 36940.2598 35255.48576 57643.37749 48622.50905 44128.05368 50508.32672 1.073825546 0.943731052 1.073493431 0.677827669 0.731369701 0.698013339 1.141264842 0.962663232 0.873678788 1 15.62423363 -9.938143348 18.72956047 0.999999973 0.904587237 0.0295888 0.15593094 0 0 0.161210846 0.039099373 1.15E-10 9.938143348 -0.095412736 DTQS(ph)PSTCSEGLLGWSQK ddPTM_A459_MK2206_30min_R1 1 DTQSPSTCSEGLLGWSQK 18 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DT(0.004)QS(0.96)PS(0.035)TCSEGLLGWSQK 218.88 2.72E-14 17355000 8991.7 8174.4 8541.4 6021.1 6805.6 7241.9 9337.9 6798.9 7711.2 8714.9 TRUE FALSE 8226.908698 7642.245074 7961.633566 6484.846165 6534.518541 7651.93012 8714.985729 6739.457934 8512.806835 9794.567606 0.839946083 0.780253441 0.812862179 0.662086008 0.667157429 0.781242259 0.889777485 0.68808121 0.869135543 1 13.25776609 -8.541112906 5.428821579 0.999936615 0.765621362 0.520718335 0.070779822 0.129137731 18.33745249 0.071317325 0.018516949 2.88E-09 8.541112906 -0.234315253 DTQS(ph)PSTCSEGLLGWSQK ddPTM_A459_MK2206_30min_R2 2 DTQSPSTCSEGLLGWSQK 18 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DT(0.007)QS(0.462)PS(0.286)T(0.093)CS(0.152)EGLLGWSQK;DT(0.048)QS(0.729)PS(0.204)T(0.016)CS(0.002)EGLLGWSQK 167.9 1.23E-07 26762000 110867 96979 99037 106612 92053 89358 125079 86777 81948 119861 TRUE FALSE 119355.0628 92163.16388 102338.8442 97901.45857 88438.53669 92758.58131 108655.9771 98119.05185 89075.68891 115949.9454 1.029367132 0.794853017 0.882612267 0.844342429 0.762730301 0.799988141 0.937093818 0.846219043 0.768225363 1 16.82314261 -4.752212103 24.99315423 0.843161848 1.029367496 0.362907835 0.071603723 384.1392314 1040410.957 0.017096434 0.208254246 1.77E-05 4.752212103 0.186205648 DTQSPS(ph)TCSEGLLGWSQK ddPTM_A459_MK2206_30min_R2 1 DTQSPSTCSEGLLGWSQK 18 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DT(0.01)QS(0.154)PS(0.798)T(0.038)CSEGLLGWSQK 118.23 0.0010016 16954000 28936 34222 31993 37241 33710 31862 40279 26024 22340 30882 TRUE FALSE 31151.36241 32522.58524 33059.63065 34198.29117 32386.37602 33074.53074 34990.31892 29425.42615 24283.09282 29874.32287 1.042747062 1.088646775 1.106623598 1.144738621 1.084087367 1.107122357 1.171250611 0.984973828 0.812841614 1 14.86661839 -7.96361329 5.520355569 0.902979565 1.105612488 0.704883449 0.053127647 0.084566987 6.646285624 0.029356616 0.013303981 1.09E-08 7.96361329 0.202632923 DTS(ph)GLER ddPTM_A459_MK2206_30min_R2 1 DTSGLER 7 0 Q9H307 Q9H307 PNN Pinin 1 DT(0.049)S(0.951)GLER 89.029 0.031501 85197000 103970 130180 112080 112020 133640 91734 150770 92642 115510 113920 TRUE FALSE 111930.0231 123715.4505 115816.6913 102867.6077 128392.6221 95225.00165 130973.7179 104750.6275 125556.851 110202.7997 1.015673135 1.12261622 1.05094146 0.93343915 1.165057716 0.86408877 1.188479042 0.95052601 1.139325419 1 16.74980135 -8.289153217 24.9805619 1.069662614 1.039902863 0.015663372 0.102580788 5393.354861 4861383.468 0.089509688 0.023132472 5.14E-09 8.289153217 -0.029759751 DTS(ph)PSSGSAVSSSK ddPTM_A459_MK2206_30min_R1 10 DTSPSSGSAVSSSK 14 0 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;Q8NEY8-7 F8WF16 PPHLN1 Periphilin-1 1 DT(0.061)S(0.934)PS(0.005)SGSAVSSSK;DT(0.009)S(0.991)PSSGSAVSSSK;DT(0.39)S(0.61)PSSGSAVSSSK;DT(0.074)S(0.926)PSSGSAVSSSK;DT(0.002)S(0.975)PS(0.004)S(0.015)GS(0.004)AVSSSK;DT(0.08)S(0.92)PSSGSAVSSSK;DT(0.036)S(0.962)PS(0.002)SGSAVSSSK;DT(0.033)S(0.966)PSSGSAVSSSK;DT(0.034)S(0.94)PS(0.023)S(0.002)GSAVSSSK;DT(0.094)S(0.905)PSSGSAVSSSK 233.52 1.16E-13 1237980800 61033.4 61382.2 60360.3 50603.4 53782.1 48127.4 60535.26 56287.3 55047.4 52038.96 TRUE FALSE 55842.18883 57386.20762 56263.21101 54500.88264 51639.84507 50852.3318 56497.06326 55795.18607 60769.77422 58485.93924 0.954796821 0.981196649 0.961995511 0.931862997 0.882944614 0.869479613 0.965993946 0.953993161 1.0390493 1 15.8358022 -8.056198595 2.512823729 1.018816061 0.933386372 0.464992782 0.035063387 0.297997411 3.462227762 0.032512241 0.010763136 8.79E-09 8.056198595 -0.085429689 DTS(ph)PSSGSAVSSSK ddPTM_A459_MK2206_30min_R2 1 DTSPSSGSAVSSSK 14 0 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;Q8NEY8-7 F8WF16 PPHLN1 Periphilin-1 1 DT(0.058)S(0.931)PS(0.009)S(0.001)GSAVSSSK 120.29 0.0020885 681040000 37393 49866 39959 51903 48289 39741 44283 38278 39966 42592 TRUE FALSE 40255.83683 47389.72695 41291.21312 47662.35887 46392.93123 41253.3716 38468.58891 43281.06603 43442.17044 41202.22653 0.977030618 1.150173933 1.002159752 1.156790855 1.12598117 1.001241318 0.933653158 1.050454543 1.054364633 1 15.33043468 -6.77794647 24.82029965 1.006453014 1.085862973 0.260240554 0.062631566 301.3283111 453078.9106 0.021816228 0.019297036 1.67E-07 6.77794647 0.079409958 DTSATSQSVNGS(ph)PQAEQPSLESTSK ddPTM_A459_MK2206_30min_R1 1 DTSATSQSVNGSPQAEQPSLESTSK 25 0 C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3;F8WAU5 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 DTSATSQS(0.001)VNGS(0.999)PQAEQPSLESTSK 103.71 6.60E-07 7622400 2746 2800.8 2923.5 2823.8 3075.1 2651.3 2986.5 2902 2543 2705.3 TRUE FALSE 2512.43828 2618.467411 2725.060965 3041.289565 2952.612255 2801.414315 2787.276034 2876.62812 2807.35395 3040.452988 0.826336829 0.861209636 0.896268081 1.000275149 0.971109327 0.921380573 0.916730515 0.94611827 0.923334109 1 11.57007057 -5.402743202 2.819330526 0.949582421 0.84065195 0.680184736 0.030222661 0.164487049 2.484317333 0.008632812 0.021616627 3.96E-06 5.402743202 -0.10893047 DTSATSQSVNGS(ph)PQAEQPSLESTSK ddPTM_A459_MK2206_30min_R2 2 DTSATSQSVNGSPQAEQPSLESTSK 25 0 C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3;F8WAU5 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 DTSATSQSVNGS(1)PQAEQPSLESTSK;DTSATSQS(0.001)VNGS(0.999)PQAEQPSLESTSK 184.43 1.94E-21 23048000 185626 197335 180606 205619 211110 178613 222564 184794 185066 209890 TRUE FALSE 199837.6693 187535.6309 186627.3139 188819.27 202820.7607 185410.2429 193341.0795 208947.2103 201162.7062 203041.3065 0.984221746 0.923632901 0.919159343 0.92995496 0.998913788 0.913165139 0.952225352 1.029087204 0.990747694 1 17.63141373 -7.678319911 6.480654414 1.007145874 0.943689237 0.503193589 0.027657984 0.165654406 10.37058038 0.013177735 0.00748293 2.10E-08 7.678319911 -0.063456637 DTSENADGQS(ph)DENKDDYTIPDEYR ddPTM_A459_MK2206_30min_R2 1 DTSENADGQSDENKDDYTIPDEYR 24 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2;Q68E03 D6REM6 MATR3;DKFZp686L22104 Matrin-3 1 DT(0.004)S(0.009)ENADGQS(0.879)DENKDDY(0.049)T(0.059)IPDEYR 54.047 0.0094449 4787900 20201 14151 15861 9866 11206 11781 18711 12783 11134 18057 TRUE FALSE 21747.60409 13448.28192 16389.79782 9059.91624 10765.99613 12229.33421 16254.22322 14453.78199 12102.41519 17467.80157 1.245010942 0.769889781 0.938286238 0.518663794 0.616333778 0.700107232 0.930524838 0.827452839 0.692841349 1 14.09241043 -4.127875046 1.637755902 0.757801882 3.42046078 0.470709388 0.146317701 6.856253938 3.748059574 0.041099578 49.21892445 7.45E-05 4.127875046 2.662658898 DTSGGIDLGEEQHPLGT(ph)PTPGR ddPTM_A459_MK2206_30min_R1 1 DTSGGIDLGEEQHPLGTPTPGR 22 0 Q9UIF8-4;Q9UIF8-2;Q9UIF8-5;Q9UIF8-3;Q9UIF8 Q9UIF8-4 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B 1 DT(0.001)S(0.001)GGIDLGEEQHPLGT(0.731)PT(0.267)PGR 82.859 0.0011659 9588100 729.12 589.35 578.33 452.78 839.66 539.27 539.8 581.88 473.14 572.93 TRUE FALSE 667.1045152 550.9832079 539.0745709 487.6531941 806.2145642 569.8030014 503.7909269 576.7926845 522.3245961 643.9088938 1.036023142 0.855685041 0.837190752 0.757332596 1.252063098 0.884912457 0.782394733 0.895767538 0.811177794 1 9.330712767 -10.6543299 4.613572334 1.000008886 0.900087872 0.043805868 0.138085959 1.41E-05 2.66E-06 0.135193997 0.032786135 2.22E-11 10.6543299 -0.099921014 DTSGGIDLGEEQHPLGT(ph)PTPGR ddPTM_A459_MK2206_30min_R2 2 DTSGGIDLGEEQHPLGTPTPGR 22 0 Q9UIF8-4;Q9UIF8-2;Q9UIF8-5;Q9UIF8-3;Q9UIF8 Q9UIF8-4 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B 1 DTSGGIDLGEEQHPLGT(0.579)PT(0.421)PGR;DTSGGIDLGEEQHPLGT(0.806)PT(0.194)PGR 81.904 0.0013345 10744700 30234 29808 27786.7 32554.8 30599.1 24915.9 28732.3 22465.8 24088.2 29129.5 TRUE FALSE 32548.73829 28327.77806 28713.09471 29894.9687 29397.62559 25864.09203 24959.7145 25402.1572 26183.34809 28179.0068 1.155070458 1.005279507 1.018953397 1.060895046 1.043245626 0.917849668 0.88575565 0.901456796 0.929179239 1 14.78233314 -6.748959834 5.966173577 0.917660959 1.05269255 0.65304335 0.047071429 0.097304905 12.06802101 0.015700296 0.014982367 1.78E-07 6.748959834 0.13503159 DTSGPTPGTPS(ph)PAMAR ddPTM_A459_MK2206_30min_R2 1 DTSGPTPGTPSPAMAR 16 0 Q9H6K5-2;Q9H6K5 Q9H6K5-2 PRR36 Proline-rich protein 36 1 DTSGPT(0.003)PGT(0.018)PS(0.979)PAMAR 97.2 0.0077499 4264300 5586.5 8993 10313 8426.3 10422 8825 10153 6530.7 5840.6 8059.3 TRUE FALSE 6014.206735 8546.420697 10656.83027 7737.844336 10012.77991 9160.841559 8819.898904 7384.284913 6348.604831 7796.325701 0.771415532 1.096211347 1.366904191 0.992498856 1.284294717 1.175020376 1.131289179 0.947149362 0.814307287 1 12.92857865 -7.820401096 4.310326785 0.900516737 1.130115643 0.244330934 0.157583115 0.283541122 10.52929808 0.090835204 0.042515679 1.51E-08 7.820401096 0.229598906 DTSLDFRPVVS(ph)PANGVEGVR ddPTM_A459_MK2206_30min_R1 2 DTSLDFRPVVSPANGVEGVR 20 1 Q8ND24 Q8ND24 RNF214 RING finger protein 214 1 DTSLDFRPVVS(1)PANGVEGVR;DTSLDFRPVVS(1)PANGVEGVR 98.887 0.00046803 23473000 1506.13 1913.44 1701.15 1160.83 1525.41 1757.76 2246 1393.54 2138.43 2284.5 TRUE FALSE 1378.025734 1788.874708 1585.680678 1250.237328 1464.64969 1857.282852 2096.173438 1381.356427 2360.727451 2567.521107 0.536714472 0.696732231 0.617592071 0.486943349 0.570452833 0.723375885 0.816419165 0.538011712 0.919457855 1 11.32616042 -8.471430601 0.540225737 1.013492295 0.587736732 0.609267144 0.103328873 0.680590409 0.484323713 0.11559958 0.054334056 3.38E-09 8.471430601 -0.425755563 DTSLYRPALEELRR ddPTM_A459_MK2206_30min_R2 2 DTSLYRPALEELRR 14 2 Q13200;C9JPC0;H7C2Q3 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 ; 99.844 0.0059669 3430700 15408.4 20333.7 18276.7 21686 21483 19343 18810.1 12847.4 18499.2 16859.4 FALSE TRUE 16588.07895 19323.95803 18886.03606 19914.18443 20639.46948 20079.11142 16340.31128 14526.59929 20108.22698 16309.27916 1.01709455 1.184844397 1.157993304 1.221034004 1.265504703 1.231146467 1.001902728 0.890695361 1.232931681 1 13.9934054 -7.267147395 24.70147916 1.022273713 1.184646759 0.340003035 0.100702132 443.8195126 1920620.925 0.041165993 0.028640656 5.41E-08 7.267147395 0.162373047 DTSPDKGELVSDEEEDT(ph) ddPTM_A459_MK2206_30min_R2 2 DTSPDKGELVSDEEEDT 17 1 Q9UPU7 Q9UPU7 TBC1D2B TBC1 domain family member 2B 1 DTSPDKGELVS(0.223)DEEEDT(0.777);DTSPDKGELVS(0.014)DEEEDT(0.986) 134.14 0.0059663 36825000 141306 167300 152146 159963 156002 128491 161386 136142 137645 145923 TRUE FALSE 152124.496 158992.1253 157218.4717 146893.5112 149876.5776 133380.815 140195.8243 153936.2268 149617.1133 141161.5445 1.077662451 1.126313302 1.113748594 1.040605724 1.061738012 0.944880672 0.993158759 1.090496902 1.059899946 1 17.10698759 -5.880334887 2.711673319 1.024739378 1.108783336 0.441888287 0.040500927 0.272538582 4.052296681 0.013162307 0.021533959 1.32E-06 5.880334887 0.084043958 DTSSS(ph)PTTGSTVQSVDLIFTR ddPTM_A459_MK2206_30min_R1 2 DTSSSPTTGSTVQSVDLIFTR 21 0 P57060 P57060 RWDD2B RWD domain-containing protein 2B 1 DTS(0.001)S(0.207)S(0.783)PT(0.01)TGSTVQSVDLIFTR;DTS(0.004)S(0.032)S(0.882)PT(0.078)T(0.003)GSTVQSVDLIFTR 231.86 4.61E-25 7091600 2508.8 2514.8 2518.1 2009.22 2442.5 2577.1 2308.8 2209.92 2182.3 1933.94 TRUE FALSE 2295.413386 2351.086063 2347.178388 2163.970473 2345.210053 2723.013175 2154.784165 2190.598902 2409.157894 2173.531088 1.05607571 1.081689641 1.079891795 0.995601344 1.078986202 1.252806178 0.9913749 1.007852574 1.108407378 1 11.08582502 -9.54431037 0.581739985 0.995503672 1.075533474 0.079988669 0.071558273 13.11876329 5.132432222 0.231963105 0.031703784 2.86E-10 9.54431037 0.080029801 DTSSS(ph)PTTGSTVQSVDLIFTR ddPTM_A459_MK2206_30min_R2 1 DTSSSPTTGSTVQSVDLIFTR 21 0 P57060 P57060 RWDD2B RWD domain-containing protein 2B 1 DT(0.004)S(0.027)S(0.171)S(0.778)PT(0.016)T(0.003)GS(0.001)TVQSVDLIFTR 99.86 0.00028844 2633300 11979 12938 12618 17570 12273 11362 17371 11778 10313 13698 TRUE FALSE 12896.12145 12295.51773 13038.67782 16134.4748 11791.10035 11794.38887 15090.16683 13317.42504 11210.0061 13251.03538 0.973216136 0.927891095 0.983974267 1.217601065 0.889824834 0.890073004 1.138791528 1.005010149 0.84597209 1 13.69381747 DTSSSPT(ph)TGSTVQSVDLIFTR ddPTM_A459_MK2206_30min_R2 1 DTSSSPTTGSTVQSVDLIFTR 21 0 P57060 P57060 RWDD2B RWD domain-containing protein 2B 1 DTS(0.01)S(0.035)S(0.171)PT(0.739)T(0.038)GS(0.004)T(0.004)VQSVDLIFTR 101.72 0.00054826 2306800 7118.1 7628.8 6495.5 9764.9 7741.9 7540.7 8065.9 7220 5387.4 6762.9 TRUE FALSE 7663.067209 7249.964885 6712.056728 8967.076434 7437.914106 7827.666623 7006.837641 8163.67879 5855.986314 6542.227127 1.171323933 1.108179943 1.025958989 1.370645846 1.136908573 1.196483471 1.071017179 1.247843988 0.895105933 1 12.67556613 -8.266676784 24.99937119 0.947552946 1.16314266 0.464647821 0.093769622 409.0540179 1952478.833 0.079484162 0.022974666 5.41E-09 8.266676784 0.215589714 DTT(ph)SFEDISPQGVSDDSSTGSR ddPTM_A459_MK2206_30min_R2 1 DTTSFEDISPQGVSDDSSTGSR 22 0 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;H0Y470;A0A2R8Y5D7;H0Y7U8;A0A2R8Y802 Q3V6T2 CCDC88A Girdin 1 DT(0.007)T(0.913)S(0.08)FEDISPQGVSDDSSTGSR 307.97 7.73E-203 0 6662 7676.1 8889.7 10608 8927.5 9731.6 15597 14614 15089 17750 TRUE FALSE 7172.047842 7294.916036 9186.078161 9741.292467 8576.961493 10101.94286 13549.09516 16524.09998 16401.41395 17170.81895 0.417688164 0.424843804 0.534981947 0.567316707 0.499508003 0.588320387 0.789076817 0.96233616 0.955191129 1 14.06767123 -7.384733687 1.362668852 0.994399356 0.484117676 0.961318287 0.042999619 0.086074902 0.307488898 0.031875082 0.016720866 4.12E-08 7.384733687 -0.510281681 down DTT(ph)SPMELAALEK ddPTM_A459_MK2206_30min_R2 3 DTTSPMELAALEK 13 0 Q6VY07-2;Q6VY07 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 DTT(0.988)S(0.012)PMELAALEK;DTT(0.626)S(0.374)PMELAALEK;DT(0.014)T(0.627)S(0.359)PMELAALEK 198.29 3.29E-21 0 65925 64979 58086 64570 59703 50051 64030 48362 43489.3 56270 TRUE FALSE 70972.26869 61752.23735 60022.55825 59294.42445 57358.76024 51955.72588 55622.78409 54683.07945 47271.9207 54433.91451 1.303824451 1.134444177 1.102668415 1.089291942 1.053732048 0.954473444 1.021840604 1.004577384 0.868427728 1 15.73221817 -1.522878745 0.344096034 0.95383708 4.741667181 0.829035564 0.04589958 23.54309232 0.332781195 0.039279952 57.52458211 0.03 1.522878745 3.787830101 DTTIINHS(ph)R ddPTM_A459_MK2206_30min_R2 4 DTTIINHSR 9 0 Q8IY63-2;Q8IY63 Q8IY63-2 AMOTL1 Angiomotin-like protein 1 1 DTTIINHS(1)R;DTTIINHS(1)R;DTTIINHS(1)R;DTTIINHS(1)R 110.93 0.0042771 25438400 250563 343917 275936 359366 274743 276336 295000 243902 230517 256231 TRUE FALSE 269746.2959 326838.5819 285135.5685 330004.6482 263955.2093 286852.1601 256266.1456 275780.8288 250566.952 247870.2035 1.088256241 1.318587621 1.150342254 1.331360703 1.064892858 1.157267619 1.033872333 1.112601777 1.01087968 1 17.91922533 -6.786908932 1.199935951 1.04434014 1.220306014 0.448517301 0.082621508 0.412278812 1.251447537 0.039696701 0.034933925 1.63E-07 6.786908932 0.175965874 DTYLSHFNPR ddPTM_A459_MK2206_30min_R1 2 DTYLSHFNPR 10 0 P40261 P40261 NNMT Nicotinamide N-methyltransferase 0 ; 136.96 0.0025272 25670000 11088.6 10270.4 10009.6 9358.9 12663.2 10227.2 11766.4 10343.3 9116.9 9701.6 FALSE TRUE 10145.45634 9601.795093 9330.17624 10079.7241 12158.79793 10806.25523 10981.48493 10252.86962 10064.63438 10903.50745 0.930476398 0.880615264 0.855704119 0.924447857 1.115127218 0.991080648 1.007151595 0.940327657 0.923063925 1 13.41250468 -6.012011849 24.7329362 0.995835825 0.888429531 0.484615395 0.050670796 447.8251999 922095.4843 0.015486114 0.021170935 9.73E-07 6.012011849 -0.107406295 DTYLSHFNPR ddPTM_A459_MK2206_30min_R2 2 DTYLSHFNPR 10 0 P40261 P40261 NNMT Nicotinamide N-methyltransferase 0 ; 150.81 0.00097772 25248000 122512 149368 117609 167996 164211 149248 169864 116424 126349 131832 FALSE TRUE 131891.6129 141950.6023 121530.0254 154270.1894 157763.251 154927.7372 147560.6528 131641.0165 137338.6076 127530.3326 1.034197984 1.113073254 0.95294996 1.209674485 1.23706453 1.214830496 1.157063184 1.03223299 1.07690935 1 16.9604809 -3.881446204 15.22381954 1.111135489 1.100310279 0 0.094405503 0 0 0.022918885 0 0.000131387 3.881446204 -0.01082521 DVAEVDTVRR ddPTM_A459_MK2206_30min_R1 2 DVAEVDTVRR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 219.72 0.00017704 16283600 8054.2 7841.2 8377.9 7695.1 10266.3 8950.2 8318.5 8373.7 5445.3 4401.1 FALSE TRUE 7369.147996 7330.736455 7809.23149 8287.777935 9857.371532 9456.952589 7763.588043 8300.489624 6011.358421 4946.341495 1.489817879 1.482052233 1.578789394 1.675536949 1.992861096 1.911908549 1.569561675 1.678106866 1.215314072 1 12.27214613 -8.387150194 2.658076403 1.001749169 1.682357794 0.677807586 0.15876696 0.169372668 2.313352248 0.172105428 0.047136686 4.10E-09 8.387150194 0.680608625 DVAEVDTVRR ddPTM_A459_MK2206_30min_R2 2 DVAEVDTVRR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 155.06 0.00072202 18843400 66031 123454 106842 135673 117542 136902 100461 88263 139212 104622 FALSE TRUE 71086.38413 117323.4539 110404.059 124588.0819 112926.7105 142111.9015 87270.35002 99799.27715 151320.4081 101208.1927 0.702377764 1.159228821 1.090860888 1.231007872 1.115786257 1.404154128 0.862285431 0.986079037 1.49513991 1 16.62696655 -4.760531653 24.95819592 1.147618797 0.702377232 0.354646691 0.180888404 24.60903918 676255.146 0.043641335 0.257101133 1.74E-05 4.760531653 -0.445241565 DVCTELLPLIKPQGR ddPTM_A459_MK2206_30min_R1 1 DVCTELLPLIKPQGR 15 1 P16152 P16152 CBR1 Carbonyl reductase [NADPH] 1 0 102.33 0.017939 6389400 1780 1645.5 1607.5 1668.3 1731.2 1569.8 1686.4 1860.7 1477.7 1333.3 FALSE TRUE 1628.601653 1538.377651 1498.387379 1796.792755 1662.242638 1658.680719 1573.903333 1844.432096 1631.312203 1498.47927 1.086836292 1.026625915 0.999938677 1.199077486 1.109286376 1.106909353 1.050333738 1.230869277 1.088645159 1 10.54928341 -5.740987866 24.99949922 1.118865147 1.036682857 0.208315543 0.065512619 338.4464486 413706.6678 0.017085166 0.029550121 1.82E-06 5.740987866 -0.08218229 DVDAS(ph)PSPLSVQDLK ddPTM_A459_MK2206_30min_R1 2 DVDASPSPLSVQDLK 15 0 Q8IWZ8 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 1 DVDAS(0.911)PS(0.088)PLS(0.001)VQDLK;DVDAS(0.995)PS(0.005)PLSVQDLK 223.14 3.54E-51 4670500 3751.3 4166.4 4409.5 3861.6 3920.4 3196 3462.9 3874.9 3443.1 2984.4 TRUE FALSE 3432.232236 3895.166603 4110.195426 4159.021101 3764.242166 3376.954758 3231.896259 3841.022158 3801.022566 3354.130003 1.023285392 1.1613046 1.225413273 1.239970155 1.122270801 1.00680497 0.963557243 1.145161981 1.133236506 1 11.71172289 -6.548469468 7.216714318 1.054246336 1.168717684 0.331144502 0.075781924 0.224257499 44.30234804 0.02675548 0.027092059 2.83E-07 6.548469468 0.114471349 DVDAS(ph)PSPLSVQDLK ddPTM_A459_MK2206_30min_R2 3 DVDASPSPLSVQDLK 15 0 Q8IWZ8 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 1 DVDAS(0.471)PS(0.462)PLS(0.067)VQDLK;DVDAS(0.997)PS(0.003)PLSVQDLK;DVDAS(0.935)PS(0.065)PLS(0.001)VQDLK 134.25 0.00046733 4128200 35665 37172 29376.5 43202 38920 33110.7 42034 30281.8 35054.1 39125 TRUE FALSE 38395.53982 35326.09253 30355.89785 39672.2584 37391.80524 34370.75089 36514.88531 34239.73523 38103.04225 37848.35445 1.014457309 0.933358743 0.802040096 1.048189782 0.987937409 0.908117444 0.964768108 0.904655849 1.006729164 1 15.20794296 -8.287967511 23.72127205 1.00336465 0.944499526 0.114906333 0.064262002 1030.726406 921652.0374 0.062033467 0.016041697 5.15E-09 8.287967511 -0.058865124 DVDASPS(ph)PLSVQDLK ddPTM_A459_MK2206_30min_R1 2 DVDASPSPLSVQDLK 15 0 Q8IWZ8 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 1 DVDAS(0.041)PS(0.951)PLS(0.008)VQDLK;DVDAS(0.201)PS(0.669)PLS(0.13)VQDLK 210.67 1.13E-06 14530900 8388.6 9332.3 9904.5 8583.8 7933.9 7735.2 8454 8213.8 7568.8 7853.9 TRUE FALSE 7675.10552 8724.765574 9232.210136 9244.925763 7617.875963 8173.160339 7890.049085 8141.987613 8355.603845 8826.900426 0.869513096 0.988429137 1.045917558 1.047358112 0.863029557 0.925937752 0.893864064 0.922406192 0.946606786 1 13.10769121 -6.260716858 24.99972448 0.919887054 0.992000027 0.221540585 0.05663248 92.88982784 3214023.345 0.017506802 0.021269227 5.49E-07 6.260716858 0.072112973 DVDASPS(ph)PLSVQDLK ddPTM_A459_MK2206_30min_R2 3 DVDASPSPLSVQDLK 15 0 Q8IWZ8 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 1 DVDAS(0.145)PS(0.837)PLS(0.018)VQDLK;DVDAS(0.145)PS(0.801)PLS(0.053)VQDLK;DVDAS(0.001)PS(0.983)PLS(0.017)VQDLK 168.05 6.87E-05 6390400 58257 62142.6 58171 64462 58362.1 49265 68073 51236.6 58089.6 62835 TRUE FALSE 62717.20071 59056.68885 60110.39211 59195.2484 56070.51071 51139.8141 59134.93333 57933.39954 63142.12841 60784.6991 1.031792567 0.971571625 0.988906633 0.973851138 0.922444489 0.841327091 0.972858864 0.953091821 1.038783269 1 15.89142059 -11.09896098 3.680870232 1.00104573 0.961998063 0.030654 0.052959142 0.000493451 5.68E-05 0.055674759 0.013142257 7.96E-12 11.09896098 -0.039047666 DVDDDGEEKELMER ddPTM_A459_MK2206_30min_R2 1 DVDDDGEEKELMER 14 1 Q5STZ8;Q8NE71;Q8NE71-2;A0A0G2JIC2 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 0 104.94 0.01691 5148700 27099 27108 29932 27429 25216 24825 29095 20461 22638 27144 FALSE TRUE 29173.72028 25761.85614 30929.91794 25187.96296 24225.89314 25769.73277 25274.79155 23135.32295 24607.01232 26258.2935 1.111028798 0.981094074 1.177910436 0.959238381 0.922599678 0.981394041 0.962545093 0.881067269 0.937113919 1 14.68048554 -5.896529896 8.748622797 0.943715556 1.078784385 0.581139098 0.054571302 0.183231918 14.05346052 0.014745389 0.021923374 1.27E-06 5.896529896 0.135068829 DVDDFFEHER ddPTM_A459_MK2206_30min_R1 2 DVDDFFEHER 10 0 G3V5X9;Q9UNH7;A0A0A0MRI2;Q9UNH7-2 G3V5X9 SNX6 "Sorting nexin-6;Sorting nexin-6, N-terminally processed" 0 ; 169.58 0.0003246 31502000 18650 20785.8 20051.9 15455.2 18944.7 18383.8 22513 17512.9 19444.6 18422.4 FALSE TRUE 17063.71956 19432.64064 18690.8329 16645.56218 18190.09248 19424.67487 21011.19885 17359.78656 21465.93575 20704.70599 0.824146915 0.938561535 0.902733557 0.803950666 0.878548697 0.938176803 1.014803053 0.838446417 1.036766026 1 14.3376711 -6.817770215 4.027545559 0.960854131 0.871110105 0.383981044 0.061281353 0.265110142 8.740117527 0.021640224 0.01947782 1.52E-07 6.817770215 -0.089744026 DVDDFFEHER ddPTM_A459_MK2206_30min_R2 4 DVDDFFEHER 10 0 G3V5X9;Q9UNH7;A0A0A0MRI2;Q9UNH7-2 G3V5X9 SNX6 "Sorting nexin-6;Sorting nexin-6, N-terminally processed" 0 ;;; 155.53 0.00073597 28808300 190978 228546 215064 245247 219916 216363 230089 185128 197870 214018 FALSE TRUE 205599.4225 217196.738 222234.1264 225209.5356 211280.9929 224596.8456 199878.0379 209324.8652 215080.3749 207034.6102 0.993067885 1.049084198 1.07341534 1.087786894 1.020510497 1.084827534 0.965432967 1.011062184 1.038861931 1 17.65951244 -7.256246753 24.96737793 1.00476112 1.052585179 0.350320734 0.031729984 499.2722017 2400625.098 0.012517359 0.009392441 5.54E-08 7.256246753 0.04782406 DVDDGSGS(ph)PHSPHQLSSK ddPTM_A459_MK2206_30min_R1 1 DVDDGSGSPHSPHQLSSK 18 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 DVDDGS(0.084)GS(0.475)PHS(0.437)PHQLS(0.003)S(0.001)K 91.64 0.0035011 10298000 2886.4 1532.9 1931.4 1330.7 2967.2 2624.8 2790.8 2392.1 1405.5 1487.8 TRUE FALSE 2640.896523 1433.107931 1800.301949 1433.190745 2849.010141 2773.413908 2604.630824 2371.186122 1551.606755 1672.119896 1.579370312 0.85706051 1.07665841 0.857110036 1.703831255 1.658621438 1.557681856 1.41807183 0.92792793 1 10.70746258 -6.254880669 24.98466373 1.421638903 1.074594063 0.164558212 0.304182038 809.0124438 3081839.201 0.091084011 0.114778767 5.56E-07 6.254880669 -0.347044841 DVDDGSGSPHS(ph)PHQLSSK ddPTM_A459_MK2206_30min_R1 2 DVDDGSGSPHSPHQLSSK 18 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 DVDDGSGSPHS(1)PHQLSSK;DVDDGS(0.001)GS(0.026)PHS(0.973)PHQLSSK 103.73 0.0013132 17255000 5880.2 3453.6 4890.5 4042 6148.3 5402.7 6120.8 4776 3460.32 3889.9 TRUE FALSE 5380.058112 3228.770012 4558.546486 4353.31554 5903.400192 5708.596205 5712.4926 4734.243936 3820.032647 4371.810179 1.230624819 0.738543047 1.042713727 0.99576957 1.350333146 1.305774032 1.306665286 1.082902446 0.873787399 1 12.09401505 -4.461044992 23.40201723 1.092435056 5.098850947 0.05153839 0.187461309 2518.15924 980162.3712 0.049114632 14936.68497 3.46E-05 4.461044992 4.006415891 DVDDGSGSPHS(ph)PHQLSSK ddPTM_A459_MK2206_30min_R2 2 DVDDGSGSPHSPHQLSSK 18 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 DVDDGS(0.024)GS(0.109)PHS(0.867)PHQLSSK;DVDDGSGSPHS(1)PHQLSSK 131.86 0.00033888 81477000 142474 205248 164125 271250 214395 207700 238340 176056 200371 193932 TRUE FALSE 153381.919 195055.6828 169596.8456 249088.0073 205976.7751 215604.169 207045.6717 199067.1237 217798.9074 187604.0147 0.817583351 1.039720195 0.904015012 1.327732819 1.097933727 1.14925136 1.103631348 1.061102685 1.160950141 1 17.51733118 -5.716578245 24.99999946 1.129738986 0.932367188 0.503648965 0.094496967 109.049862 60769.95329 0.02444854 0.042345866 1.92E-06 5.716578245 -0.197371798 DVDEIEAWISEK ddPTM_A459_MK2206_30min_R1 2 DVDEIEAWISEK 12 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 ; 153.95 0.0063074 2711200 1440.8 1493.98 1302.7 1448.69 1501 1134.13 1378.91 1259.43 1154.38 943.49 FALSE TRUE 1318.252394 1396.72163 1214.276354 1560.268355 1441.211992 1198.343461 1286.92543 1248.418936 1274.381932 1060.376664 1.243192574 1.317193859 1.145136813 1.471428415 1.359150989 1.130111121 1.213649332 1.177335355 1.201820047 1 10.05036111 -6.766498406 24.99997479 1.15998325 1.307892617 0.414970466 0.095682762 142.7537862 705435.4072 0.033296974 0.030261587 1.71E-07 6.766498406 0.147909368 DVDEIEAWISEK ddPTM_A459_MK2206_30min_R2 1 DVDEIEAWISEK 12 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 157.68 0.0061905 945500 5913.1 6953.7 6553.2 7340.5 6570.7 5113.7 7804.4 4599.5 7169.9 8059.1 FALSE TRUE 6365.811482 6608.38937 6771.680417 6740.757669 6312.701303 5308.305437 6779.672905 5200.670442 7793.524942 7796.132227 0.816534571 0.847649729 0.868594865 0.864628443 0.809722195 0.680889611 0.869620051 0.667083406 0.999665567 1 12.92854284 -8.295448027 23.61197631 0.999833195 0.807175791 0.561410712 0.069482907 274.6265978 190667.3878 0.066679388 0.017222215 5.06E-09 8.295448027 -0.192657404 DVDELPSLQPS(ph)VGSPSRPSSSR ddPTM_A459_MK2206_30min_R2 1 DVDELPSLQPSVGSPSRPSSSR 22 1 O43815-2;O43815 O43815-2 STRN Striatin 1 DVDELPS(0.001)LQPS(0.375)VGS(0.375)PS(0.213)RPS(0.012)S(0.012)S(0.012)R 48.656 0.035318 10485000 22226 21860 20880 29340 27290 24811 25166 22533 28206 25164 TRUE FALSE 23927.63965 20774.46419 21576.12878 26942.82815 26218.45748 25755.19999 21861.67397 25478.14047 30659.3069 24342.90074 0.982941183 0.853409559 0.886341731 1.106804338 1.077047381 1.058016884 0.898071853 1.046635351 1.259476314 1 14.57121347 -5.754266709 24.97720421 1.059080329 0.902148655 0.384819146 0.090267369 177.3236478 617482.2728 0.025427756 0.042876242 1.76E-06 5.754266709 -0.156931673 DVDELPSLQPSVGS(ph)PSRPSSSR ddPTM_A459_MK2206_30min_R1 2 DVDELPSLQPSVGSPSRPSSSR 22 1 O43815-2;O43815 O43815-2 STRN Striatin 1 DVDELPSLQPS(0.067)VGS(0.34)PS(0.116)RPS(0.204)S(0.204)S(0.069)R;DVDELPSLQPS(0.035)VGS(0.669)PS(0.16)RPS(0.06)S(0.06)S(0.015)R 101.23 6.69E-05 93180000 7222.3 7087.2 7274 5606.7 6803.9 7125.8 7522.4 6635.3 6350.3 6323.1 TRUE FALSE 6608.005459 6625.821992 6780.261147 6038.529005 6532.886256 7529.256638 7020.594421 6577.288272 7010.43641 7106.453365 0.929859822 0.932366914 0.954099154 0.849724707 0.91928926 1.05949568 0.987918173 0.925537386 0.986488766 1 12.79491401 -6.574727768 24.99396925 0.987253522 0.915851874 0.472713153 0.039364878 100.6222708 48504.53692 0.013659318 0.013659319 2.66E-07 6.574727768 -0.071401648 DVDELPSLQPSVGS(ph)PSRPSSSR ddPTM_A459_MK2206_30min_R2 3 DVDELPSLQPSVGSPSRPSSSR 22 1 O43815-2;O43815 O43815-2 STRN Striatin 1 DVDELPSLQPS(0.006)VGS(0.539)PS(0.453)RPS(0.001)S(0.002)S(0.001)R;DVDELPSLQPS(0.043)VGS(0.801)PS(0.156)RPSSSR;DVDELPSLQPS(0.045)VGS(0.476)PS(0.476)RPS(0.001)S(0.001)SR 182.62 8.70E-17 139953000 89623 108088 96668 109424 115811 117316 131243 90889 104906 119369 TRUE FALSE 96484.60579 102720.5071 99890.86287 100483.7092 111263.6782 121780.5426 114010.6364 102768.5044 114030.5343 115473.9993 0.835552647 0.889555291 0.865050691 0.870184715 0.963538796 1.054614401 0.987327339 0.889970946 0.987499653 1 16.81720852 -6.287238787 4.564937219 0.980099407 0.866077422 0.671630036 0.039665282 0.136781511 7.298170406 0.013296046 0.015799028 5.16E-07 6.287238787 -0.114021985 DVDELPSLQPSVGSPS(ph)RPSSSR ddPTM_A459_MK2206_30min_R1 1 DVDELPSLQPSVGSPSRPSSSR 22 1 O43815-2;O43815 O43815-2 STRN Striatin 1 DVDELPSLQPS(0.35)VGS(0.132)PS(0.38)RPS(0.046)S(0.046)S(0.046)R 101.05 6.85E-05 36752000 1613.9 1540.8 1521.5 1320.6 1727.6 1612 1354.1 1408 1394.4 1160.1 TRUE FALSE 1476.62933 1440.49364 1418.224819 1422.312841 1658.786034 1703.270047 1263.77046 1395.690004 1539.35287 1303.821946 1.132539097 1.104823894 1.087744245 1.090879659 1.272248898 1.306367063 0.969281475 1.070460586 1.18064654 1 10.34853115 -10.33625825 4.168652706 0.999998575 1.133728828 0.158467193 0.093287935 34539483.97 86903274.8 859.5018511 0.02489675 4.61E-11 10.33625825 0.133730253 DVDELPSLQPSVGSPS(ph)RPSSSR ddPTM_A459_MK2206_30min_R2 1 DVDELPSLQPSVGSPSRPSSSR 22 1 O43815-2;O43815 O43815-2 STRN Striatin 1 DVDELPSLQPS(0.048)VGS(0.191)PS(0.675)RPS(0.029)S(0.029)S(0.029)R 72.883 0.0014854 3114800 11975 14883 13776 14981 13668 14797 15920 10526 13262 15475 TRUE FALSE 12891.81521 14143.93186 14235.28496 13757.00438 13131.32564 15360.1102 13829.68488 11901.78434 14415.50479 14970.05202 0.861173708 0.944815145 0.950917535 0.918968375 0.877173014 1.026055901 0.923823435 0.795039612 0.962956226 1 13.86979161 -4.75210748 24.20966908 0.927850799 0.861173511 0.10607896 0.060995223 637.2451321 1653019.588 0.01518016 0.180343097 1.77E-05 4.75210748 -0.066677288 DVDETGITVAS(ph)LER ddPTM_A459_MK2206_30min_R1 2 DVDETGITVASLER 14 0 Q8WU90;H7C466 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 DVDETGITVAS(1)LER;DVDETGITVAS(1)LER 262.37 5.70E-36 14717500 2436.7 2008.28 1774.96 2206.01 2224.3 1828.22 2058.3 2165.3 1869.3 1751.55 TRUE FALSE 2229.445869 1877.540607 1654.480661 2375.917272 2135.701421 1931.732236 1920.994563 2146.36901 2063.620424 1968.545238 1.13253474 0.953770618 0.840458542 1.206940652 1.08491356 0.981299388 0.975844764 1.090332581 1.048297182 1 10.94291415 -5.752620113 24.99988594 1.053969785 0.973406318 0.137911659 0.091319143 407.3490216 1154695.806 0.025659029 0.043609347 1.77E-06 5.752620113 -0.080563467 DVDETGITVAS(ph)LER ddPTM_A459_MK2206_30min_R2 2 DVDETGITVASLER 14 0 Q8WU90;H7C466 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 DVDETGITVAS(1)LER;DVDETGITVAS(1)LER 238.88 1.90E-19 9119600 31718 30309 28997 34906 34718 29994 37193 28842 28869 36807 TRUE FALSE 34146.35447 28803.89913 29963.74551 32054.06814 33354.79688 31135.44269 32309.51442 32611.74843 31379.97344 35605.9906 0.959005883 0.808962162 0.841536635 0.900243684 0.93677486 0.874443939 0.907417934 0.915906225 0.881311625 1 15.11983237 -14.52287875 0.185332765 1.462535409 0.868953906 0.376620582 0.041617907 141.8572614 1.373963156 24.16280681 0.12110824 3.00E-15 14.52287875 -0.593581503 DVDIIDHHDNTYTVK ddPTM_A459_MK2206_30min_R1 3 DVDIIDHHDNTYTVK 15 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 ;; 75.589 0.021653 48393100 28815.5 27909.3 29124.5 25287 29517.3 26884.9 28253.2 26739.7 24171.7 21454.7 FALSE TRUE 26364.59041 26092.3995 27147.61009 27234.60912 28341.56344 28407.0998 26368.48058 26505.91762 26684.43471 24112.67021 1.093391573 1.082103279 1.125864944 1.129472965 1.175380544 1.178098467 1.093552906 1.099252691 1.106656147 1 14.5575038 -9.036897511 0.901283473 0.999743748 1.126786364 0.58770225 0.030839615 1.427143108 1.753176328 0.035167755 0.011254653 9.19E-10 9.036897511 0.127042617 DVDLEFLAK ddPTM_A459_MK2206_30min_R1 1 DVDLEFLAK 9 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 135.79 0.037342 5259900 3193.3 3552.4 4110.2 3929.1 3879.6 3242.7 3723.5 3437.5 3157.1 3127 FALSE TRUE 2921.693066 3321.138114 3831.211076 4231.719963 3725.067317 3426.298872 3475.112109 3407.4463 3485.291843 3514.396368 0.831349899 0.945009546 1.090147688 1.204110043 1.059945131 0.974932396 0.988821904 0.969568012 0.991718485 1 11.7790612 -10.27870699 14.92996097 1 1.011745413 0 0.093022145 0 0 0.099132518 0.024043167 5.26E-11 10.27870699 0.011745413 DVDVSEDS(ph)PPPLPER ddPTM_A459_MK2206_30min_R1 4 DVDVSEDSPPPLPER 15 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 DVDVS(0.407)EDS(0.593)PPPLPER;DVDVS(0.126)EDS(0.874)PPPLPER;DVDVS(0.45)EDS(0.55)PPPLPER;DVDVS(0.089)EDS(0.911)PPPLPER 266.45 3.56E-38 113485600 10584.8 11238.3 10652.1 7629.1 9193 8890.1 11662.8 9189.3 11534.5 13501.7 TRUE FALSE 9684.507177 10506.68463 9929.06513 8216.694604 8826.823344 9393.449779 10884.79589 9108.958919 12733.55255 15174.39253 0.63821383 0.692395732 0.654330321 0.541484253 0.58169204 0.619033003 0.717313452 0.600284914 0.839147434 1 13.88935114 -8.475642666 2.820701715 0.999232097 0.630807795 0.855975933 0.049466493 0.089339921 1.572700311 0.051025922 0.013729666 3.34E-09 8.475642666 -0.368424302 DVDVSEDS(ph)PPPLPER ddPTM_A459_MK2206_30min_R2 4 DVDVSEDSPPPLPER 15 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 DVDVS(0.438)EDS(0.562)PPPLPER;DVDVS(0.464)EDS(0.536)PPPLPER;DVDVS(0.184)EDS(0.816)PPPLPER;DVDVS(0.091)EDS(0.909)PPPLPER 232.26 4.66E-14 143783000 145400 144625 126316 142470 125475 132393.6 144827 104225.1 110833.6 143600 TRUE FALSE 156531.9358 137443.1328 130527.3124 130829.7453 120548.221 137431.9312 125811.0409 117847.6784 120473.7062 138914.3438 1.126823419 0.989409222 0.93962444 0.941801557 0.867788148 0.989328586 0.905673507 0.848347804 0.867251739 1 17.08383605 -1.522878813 0.780149269 0.907689662 49.17879748 0.640341395 0.047558574 271.4111325 1.030829905 0.017260803 23106.71999 0.029999995 1.522878813 48.27110781 DVEDEETWIR ddPTM_A459_MK2206_30min_R1 2 DVEDEETWIR 10 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 ; 195.57 0.0023248 17320000 5458.4 5489.5 5797.8 4931.6 6055.3 5284.3 5535.4 5681.5 5459.3 4132.3 FALSE TRUE 4994.134417 5132.132552 5404.26149 5311.432686 5814.104579 5583.492499 5166.143566 5631.827244 6026.813771 4644.240521 1.075339314 1.105053136 1.163648064 1.143660123 1.251895666 1.202240167 1.112376403 1.212647626 1.297696307 1 12.18122697 -5.199420747 1.390933067 1.186019242 1.06449217 0.155309838 0.076988452 1.081836795 3.095914743 0.022617371 0.148550834 6.32E-06 5.199420747 -0.121527072 DVEDEETWIR ddPTM_A459_MK2206_30min_R2 3 DVEDEETWIR 10 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 ;; 195.57 0.0023248 20254100 74411 92916 82949 84433 83263 82774 91946 80005 77017 83387 FALSE TRUE 80107.96337 88301.92655 85714.47826 77534.55381 79993.67626 85924.02257 79873.37975 90461.9282 83715.79945 80666.08902 0.993081037 1.094659821 1.062583786 0.961179038 0.991664245 1.065181461 0.990172955 1.121436892 1.037806598 1 16.29967469 -7.725622863 24.99992135 1.059716877 1.025032156 0.071141716 0.048116865 419.4316279 292763.1452 0.022886256 0.013212822 1.88E-08 7.725622863 -0.034684721 DVEDEILWVGER ddPTM_A459_MK2206_30min_R1 2 DVEDEILWVGER 12 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 0 ; 220.82 4.08E-07 9472100 1496.2 1761.83 1785.65 1614.98 1990.94 1671.88 1701.46 1494.12 1488.16 1471.68 FALSE TRUE 1368.940333 1647.134547 1664.445053 1739.366039 1911.636644 1766.540401 1587.958708 1481.057066 1642.859557 1654.002829 0.827652957 0.995847479 1.006313305 1.051610075 1.15576383 1.068039528 0.960070128 0.895438049 0.993262846 1 10.69174599 -10.72819827 14.50964101 0.999999862 0.999857857 0 0.085951173 0 0 0.090357783 0.021914981 1.87E-11 10.72819827 -0.000142004 DVEDMELS(ph)DVEDDGSK ddPTM_A459_MK2206_30min_R1 4 DVEDMELSDVEDDGSK 16 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK 308 1.27E-150 24994100 8967.95 10351.32 11220.02 6670.27 5781.56 6786.25 9462.08 6781.02 12632.99 15060.51 TRUE FALSE 8205.17876 9677.447187 10458.4363 7184.015351 5551.268223 7170.48161 8830.881908 6721.734257 13946.23452 16926.31968 0.484758584 0.571739597 0.617880112 0.42442867 0.327966642 0.423629102 0.521724868 0.397117293 0.823937795 1 14.0469807 -8.425007898 3.632043357 0.995509492 0.4736235 0.827646492 0.082114592 0.091819291 2.15883612 0.087594715 0.023166589 3.76E-09 8.425007898 -0.521885992 down DVEDMELS(ph)DVEDDGSK ddPTM_A459_MK2206_30min_R2 3 DVEDMELSDVEDDGSK 16 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 DVEDMELS(0.998)DVEDDGS(0.002)K;DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK 155.26 0.00035061 9594000 68118.5 48498.6 47914.9 47755.7 43977.2 32589.7 53988.3 49275.4 33962.3 62464.1 TRUE FALSE 73333.70473 46090.23005 49512.35885 43853.90655 42250.43416 33829.92387 46899.57136 55715.86397 36916.27946 60425.90153 1.213613746 0.762756184 0.819389659 0.725746831 0.699210655 0.559857992 0.77615013 0.922052672 0.610934691 1 15.88287947 -4.760965855 6.819599505 0.753401904 1.224578803 0.537756114 0.124733668 0.08583949 21.37140101 0.030231253 0.187072494 1.73E-05 4.760965855 0.4711769 DVES(ph)PSWR ddPTM_A459_MK2206_30min_R1 1 DVESPSWR 8 0 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 DVES(0.875)PS(0.125)WR 128.91 0.0042103 12976000 2749.5 3183.6 3231.4 2475.5 3387.7 3181.8 3295.9 3053.9 2625.1 2848.9 TRUE FALSE 2515.640587 2976.347061 3012.061571 2666.163439 3252.760735 3361.950766 3076.036525 3027.200074 2897.988539 3201.84324 0.785685119 0.929573011 0.94072737 0.832696431 1.015902557 1.050004799 0.960708034 0.945455429 0.905100069 1 11.64468696 -3.542380163 0.712638315 0.967130588 4.98E-16 0.450133956 0.056696045 15.10111151 1.493166017 0.023834647 17.57685779 0.000286827 3.542380163 -0.967130588 DVES(ph)PSWR ddPTM_A459_MK2206_30min_R2 2 DVESPSWR 8 0 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 DVES(0.857)PS(0.143)WR;DVES(0.998)PS(0.002)WR 134.84 0.0027041 36818000 95238 107852 80123 110595 102460 97194 89996 83112 91669 95199 TRUE FALSE 102529.4945 102496.2265 82794.26083 101559.0347 98436.90558 100892.7858 78179.4171 93975.02377 99642.20392 92092.66443 1.113329657 1.112968412 0.899032093 1.102791795 1.068889756 1.095557246 0.848921221 1.02043984 1.081977642 1 16.49079862 DVESPS(ph)WR ddPTM_A459_MK2206_30min_R1 1 DVESPSWR 8 0 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 DVES(0.374)PS(0.626)WR 133.75 0.002981 14402000 2707.8 3149 3122.3 2974.4 3340 3409.1 3257.8 3280.4 2915.9 2984.3 TRUE FALSE 2477.487391 2943.999528 2910.366975 3203.488803 3206.960727 3602.120296 3040.478106 3251.719809 3219.01824 3354.017614 0.738662606 0.87775315 0.867725608 0.955119851 0.956155005 1.073971789 0.906518229 0.96949992 0.959749951 1 11.71167455 -4.254774913 0.692757682 0.978893241 0.398459595 0.734185656 0.044097171 3.037092993 0.65695284 0.018475675 1.633624357 5.56E-05 4.254774913 -0.580433646 DVESPS(ph)WR ddPTM_A459_MK2206_30min_R2 1 DVESPSWR 8 0 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 DVES(0.122)PS(0.878)WR 85.533 0.038029 0 26115 20089 17054 27131 21378 20685 23060 16605 25230 17568 TRUE FALSE 28114.38448 19091.40947 17622.57185 24914.31051 20538.5923 21472.18217 20032.1943 18775.33051 27424.45979 16994.7576 1.654297469 1.123370508 1.036941642 1.465999757 1.208525169 1.263459161 1.178727863 1.104771892 1.613701145 1 14.05280216 -4.752862237 24.87305407 1.226403651 1.654298329 0.34179165 0.179982226 351.3428244 1018784.893 0.042715748 0.484931191 1.77E-05 4.752862237 0.427894678 DVESYIHR ddPTM_A459_MK2206_30min_R1 2 DVESYIHR 8 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 0 ; 171.53 0.0002243 18429800 17120.5 16422.9 15444.9 12875.7 17398.4 21720 20063.8 13638.8 16235.7 15022.9 FALSE TRUE 15664.31157 15353.76623 14396.54322 13867.38864 16705.38489 22949.76763 18725.38051 13519.55741 17923.45912 16884.05027 0.927757933 0.90936511 0.852671189 0.821330689 0.989418097 1.359257244 1.109057377 0.800729517 1.061561582 1 14.04337341 -6.517708853 24.99798103 1.069459949 0.88163497 0.316565774 0.130393764 307.1432584 1485138.753 0.04613739 0.047427826 3.04E-07 6.517708853 -0.187824979 DVESYIHR ddPTM_A459_MK2206_30min_R2 4 DVESYIHR 8 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 0 ;;; 155.1 0.00087623 34934600 277716 322387 263703 354384 322830 333970 411959 324957 258031 327640 FALSE TRUE 298978.1505 306377.7304 272494.7264 325429.6936 310154.0721 346679.4624 357868.2884 367429.9956 280474.07 316949.1336 0.943300103 0.966646373 0.859742771 1.026756848 0.978561035 1.093801578 1.129103223 1.159271178 0.884918241 1 18.2738918 -6.255387901 1.717979093 1.064403642 0.932098148 0.273475073 0.08044587 0.433364378 2.527872702 0.028557307 0.038292684 5.55E-07 6.255387901 -0.132305493 DVFFYQADDEHYIPR ddPTM_A459_MK2206_30min_R1 1 DVFFYQADDEHYIPR 15 0 K7EKE5;K7EIS0;Q9NRH3;P23258 K7EKE5 TUBG1;TUBG2 Tubulin gamma chain;Tubulin gamma-2 chain;Tubulin gamma-1 chain 0 128.06 0.0014084 2912000 1200.1 1505.4 1532.5 1199.8 1308.2 856.14 1041 1285.6 805.71 867.65 FALSE TRUE 1098.025193 1407.398186 1428.47817 1292.208804 1256.091624 904.6139069 971.5567894 1274.360135 889.4664378 975.1410324 1.126016808 1.443276551 1.46489392 1.325150682 1.288112778 0.927674948 0.996324385 1.306847002 0.912141329 1 9.929467077 -6.631536032 5.604613327 1.046851564 1.350242438 0.559102706 0.133426913 0.165536041 7.57394691 0.044865232 0.044755371 2.34E-07 6.631536032 0.303390874 DVGRPQPGR ddPTM_A459_MK2206_30min_R2 1 DVGRPQPGR 9 1 P37802;P37802-2;X6RJP6 P37802 TAGLN2 Transgelin-2 0 126.24 0.01367 20369000 31039 39330 28300 28397 33748 30706 32666 26587 31179 22660 FALSE TRUE 33415.3697 37376.92939 29243.50788 26076.87426 32422.88395 31874.53835 28376.91496 30062.01219 33890.89306 21920.60606 1.524381653 1.705104745 1.334064752 1.189605534 1.479105271 1.454090196 1.294531496 1.371404244 1.546074637 1 14.42000007 -12.93478983 0.251957218 7.21E-29 1.469169887 0.457099821 0.139529694 76.87220643 1.565251067 40.80155555 0.218747202 1.16E-13 12.93478983 1.469169887 DVHTLLDR ddPTM_A459_MK2206_30min_R1 1 DVHTLLDR 8 0 E9PI41;Q9NPD3 E9PI41 EXOSC4 Exosome complex component RRP41 0 101.25 0.024142 2225300 2829.1 2463.1 2504.9 2887.1 2601.6 2817.8 2441.6 2671.4 2079.7 1703.8 FALSE TRUE 2588.470189 2302.751742 2334.874367 3109.464942 2497.972763 2977.341401 2278.725319 2648.044231 2295.892257 1914.879607 1.351766544 1.20255693 1.219332202 1.623843573 1.304506432 1.554845218 1.190009706 1.382877661 1.198974729 1 10.90303797 -8.641896086 1.422201364 0.998894096 1.357774192 0.395542709 0.136359535 0.603766854 2.552518156 0.130401762 0.03862534 2.28E-09 8.641896086 0.358880097 DVIATDKEDVAFK ddPTM_A459_MK2206_30min_R2 1 DVIATDKEDVAFK 13 1 A0A5K1VW95;P40925;P40925-3;C9JRL4;C9JF79;C9JLV6 A0A5K1VW95 MDH1 "Malate dehydrogenase, cytoplasmic;Malate dehydrogenase" 0 96.82 0.039093 4644000 28556 32563 32226 33435 30199 23486 32621 30628 24479 34410 FALSE TRUE 30742.26932 30945.96877 33300.39876 30703.25355 29013.23552 24379.77619 28337.82352 34631.18476 26608.13917 33287.20452 0.923546142 0.929665594 1.000396376 0.922374047 0.871603246 0.732406837 0.851312807 1.040375281 0.799350368 1 15.0226801 -6.099196975 4.33117464 0.875929666 0.950691068 0.11300007 0.085600761 0.491671583 15.74106358 0.02636339 0.035110503 7.96E-07 6.099196975 0.074761401 DVLDVYIEHR ddPTM_A459_MK2206_30min_R1 2 DVLDVYIEHR 10 0 P33993;P33993-2 P33993 MCM7 DNA replication licensing factor MCM7 0 ; 99.522 0.025857 7325900 6994 7480 7589.9 5727.4 6351.6 6510.2 7720.9 6273.1 6746 8467.2 FALSE TRUE 6399.123573 6993.05064 7074.718735 6168.52534 6098.602322 6878.801898 7205.852849 6218.254948 7447.270841 9516.18066 0.672446626 0.734858962 0.743440986 0.6482144 0.640866598 0.722853227 0.757221106 0.653440195 0.782590317 1 13.21616695 -8.625936534 3.998954281 0.999956773 0.699371286 0.839647643 0.040075378 0.204282529 7.054671322 0.040308699 0.010557858 2.37E-09 8.625936534 -0.300585486 DVLLQVDDERR ddPTM_A459_MK2206_30min_R1 4 DVLLQVDDERR 11 1 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 ;;; 236.69 3.59E-10 51409500 15510.3 14443.2 16122.8 14227.6 15927.8 15599.2 16171.7 14507.8 13681.5 12082.1 FALSE TRUE 14191.06754 13502.94505 15028.42926 15323.41222 15293.362 16482.41322 15092.9154 14380.95983 15103.74088 13578.92176 1.045080588 0.994404805 1.106746877 1.128470469 1.126257465 1.213823418 1.111495866 1.059064931 1.112293093 1 13.72908131 -5.310456447 7.19087579 1.115002107 1.019884519 0.297838549 0.05271699 0.252945122 32.20170582 0.013895001 0.029471425 4.89E-06 5.310456447 -0.095117588 DVLLQVDDERR ddPTM_A459_MK2206_30min_R2 4 DVLLQVDDERR 11 1 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 ;;; 236.69 3.59E-10 47152600 158012 192214 164372 194636 190738 185342 189579 152380 162296 161535 FALSE TRUE 170109.5202 182668.9323 169852.0804 178733.6162 183248.6677 192395.3197 164687.0496 172296.5892 176412.2127 156264.1262 1.088602511 1.168975482 1.086955046 1.143791736 1.172685454 1.231218735 1.053901837 1.102598488 1.128936097 1 17.25362709 -9.232678955 0.635972839 0.99607454 1.140144914 0.402547783 0.048449579 2.678720855 1.560421339 0.078853032 0.019906619 5.85E-10 9.232678955 0.144070374 DVLS(ph)VAFSSDNR ddPTM_A459_MK2206_30min_R1 1 DVLSVAFSSDNR 12 0 P63244;J3KPE3;H0Y8W2;H0YAM7;H0YAF8;D6R9L0;D6R9Z1;D6RFZ9;D6RHH4;D6RFX4;E9PD14;D6RAU2 P63244 GNB2L1 "Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed" 1 DVLS(0.999)VAFS(0.001)S(0.001)DNR 92.151 0.022061 2010100 1176.3 1470.5 1324.8 1195.9 1517.4 1021.1 1201.3 1108.7 1234.6 1329.4 TRUE FALSE 1076.249508 1374.770183 1234.876267 1288.008425 1456.958745 1078.9138 1121.163469 1099.006753 1362.941088 1494.096108 0.720334858 0.92013504 0.826503904 0.86206531 0.975143926 0.722118071 0.750395816 0.735566304 0.912217815 1 10.54505724 -6.782415558 24.99966041 0.802928566 0.862291945 0.011021931 0.101055961 685.5575195 817049.9001 0.034385037 0.030355815 1.65E-07 6.782415558 0.059363379 DVLS(ph)VAFSSDNR ddPTM_A459_MK2206_30min_R2 1 DVLSVAFSSDNR 12 0 P63244;J3KPE3;H0Y8W2;H0YAM7;H0YAF8;D6R9L0;D6R9Z1;D6RFZ9;D6RHH4;D6RFX4;E9PD14;D6RAU2 P63244 GNB2L1 "Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed" 1 DVLS(0.997)VAFS(0.003)SDNR 107.17 0.0098058 0 2923.9 3795 3667.3 3576.6 4433.9 4326.2 5030.2 2922 3822 4437.6 TRUE FALSE 3147.756032 3606.545818 3789.565952 3284.380339 4259.802807 4490.836573 4369.728698 3303.915433 4154.430651 4292.801475 0.733263826 0.84013804 0.882772235 0.7650902 0.992313023 1.046131902 1.017920051 0.769640863 0.967766778 1 12.06770374 -6.265395983 24.94986473 0.960750536 0.81333594 0.489356046 0.079966324 336.6011712 2122563.294 0.026142895 0.03073621 5.43E-07 6.265395983 -0.147414596 DVMS(ph)DETNNEETESPSQEFVNITK ddPTM_A459_MK2206_30min_R1 1 DVMSDETNNEETESPSQEFVNITK 24 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DVMS(0.995)DET(0.005)NNEETESPSQEFVNITK 221.9 1.02E-34 8886200 2257.2 2472.7 2136.9 2438.7 2379.6 1971.2 2124.7 2219 2014.2 1521.1 TRUE FALSE 2065.213287 2311.726781 1991.853182 2626.529097 2284.815493 2082.807641 1982.96514 2199.599517 2223.583298 1709.545352 1.20804826 1.352246536 1.165136204 1.536390417 1.336504756 1.218340092 1.159937136 1.286657599 1.300686932 1 10.73939698 -6.784704076 7.676344242 1.20858608 1.324981638 0.210341742 0.120551174 0.32751302 79.39227598 0.041690669 0.03759746 1.64E-07 6.784704076 0.116395557 DVMSDETNNEETES(ph)PSQEFVNITK ddPTM_A459_MK2206_30min_R1 9 DVMSDETNNEETESPSQEFVNITK 24 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DVMSDETNNEET(0.075)ES(0.822)PS(0.103)QEFVNITK;DVMSDETNNEETES(0.997)PS(0.002)QEFVNITK;DVMSDETNNEET(0.181)ES(0.789)PS(0.03)QEFVNITK;DVMSDETNNEET(0.012)ES(0.928)PS(0.06)QEFVNITK;DVMSDETNNEET(0.071)ES(0.859)PS(0.071)QEFVNITK;DVMS(0.055)DET(0.055)NNEET(0.171)ES(0.68)PS(0.037)QEFVNITK;DVMSDETNNEET(0.017)ES(0.983)PSQEFVNITK;DVMSDETNNEET(0.014)ES(0.978)PS(0.008)QEFVNITK;DVMSDETNNEET(0.001)ES(0.951)PS(0.048)QEFVNITK 199.57 5.92E-31 231481300 30051.2 30577.2 31587.1 27753.4 31431.7 26523.9 28777.5 28872.3 26043.14 23672.3 TRUE FALSE 27495.18763 28586.61872 29443.05566 29890.97168 30179.70883 28025.6603 26857.80548 28619.87253 28750.4176 26605.00324 1.033459285 1.074482813 1.106673635 1.123509417 1.134362156 1.053398116 1.009502056 1.075732721 1.080639508 1 14.69940996 -6.926945903 10.04456984 1.045458263 1.095604011 0.345565383 0.034964894 0.492411482 64.06552782 0.013085525 0.01154051 1.18E-07 6.926945903 0.050145748 DVMSDETNNEETES(ph)PSQEFVNITK ddPTM_A459_MK2206_30min_R2 4 DVMSDETNNEETESPSQEFVNITK 24 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DVMSDETNNEET(0.012)ES(0.987)PS(0.002)QEFVNITK;DVMSDETNNEET(0.414)ES(0.578)PS(0.008)QEFVNITK;DVMSDETNNEET(0.001)ES(0.995)PS(0.005)QEFVNITK;DVMSDETNNEET(0.007)ES(0.709)PS(0.284)QEFVNITK 159.98 6.13E-13 23173400 315630 332112 317853 336329 357214 308328 363669 272496 302753 343157 TRUE FALSE 339794.8755 315619.801 328450.0604 308849.8448 343187.9835 320061.6381 315918.8235 308112.1628 329085.9087 331959.8152 1.023602436 0.950777132 0.98942717 0.930383229 1.033823878 0.964157779 0.951677911 0.928161026 0.991342607 1 18.34064908 -6.967870749 24.99993994 0.961252851 0.982630526 0.053012899 0.034181213 510.2519294 397028.3526 0.011568015 0.010201976 1.08E-07 6.967870749 0.021377676 DVNAAIAT(ph)IK ddPTM_A459_MK2206_30min_R1 1 DVNAAIATIK 10 0 Q9BQE3;F5H5D3;A0A1W2PQM2;P68363;P68363-2 Q9BQE3;P68363 TUBA1C;TUBA1B Tubulin alpha-1C chain;Tubulin alpha-1B chain 1 DVNAAIAT(1)IK 116.51 0.014763 10505000 3412.2 4031 4490.8 3706.4 2757.7 2565 3255.5 3304.8 3180.4 3016 TRUE FALSE 3121.974472 3768.581167 4185.977008 3991.86757 2647.854969 2710.228083 3038.331535 3275.906482 3511.013961 3389.64485 0.921032914 1.111792337 1.234930854 1.177665433 0.78116 0.799561076 0.896356896 0.966445344 1.035805849 1 11.72691841 -6.250326203 24.93069516 0.905017539 1.120213421 0.453568526 0.106132946 665.6403268 1493260.712 0.033948987 0.043401207 5.62E-07 6.250326203 0.215195883 DVNAAIAT(ph)IK ddPTM_A459_MK2206_30min_R2 3 DVNAAIATIK 10 0 Q9BQE3;F5H5D3;A0A1W2PQM2;P68363;P68363-2 Q9BQE3;P68363 TUBA1C;TUBA1B Tubulin alpha-1C chain;Tubulin alpha-1B chain 1 DVNAAIAT(1)IK;DVNAAIAT(1)IK;DVNAAIAT(1)IK 126.1 0.0082183 14847600 118540 126798 126210 103537 105661 92564 110802 95948 100746 120208 TRUE FALSE 127615.5135 120501.3957 130417.7784 95077.6959 101512.2182 96086.58788 96253.5643 108488.733 109508.705 116285.6228 1.097431569 1.036253604 1.121529689 0.817622107 0.87295588 0.826298089 0.827734005 0.932950527 0.941721791 1 16.82731321 -5.757792508 24.99999787 0.879907732 1.08018985 0.700118806 0.058751413 50.17162186 343929.7314 0.01622079 0.026745993 1.75E-06 5.757792508 0.200282119 DVNQQEFVR ddPTM_A459_MK2206_30min_R2 2 DVNQQEFVR 9 0 P39019;M0R2L9;M0QYF7;M0R140 P39019 RPS19 40S ribosomal protein S19 0 ; 166.07 0.012932 28607000 49290 51141 39817 54942 55640 53910 54868 42511 53471 41298 FALSE TRUE 53063.6803 48601.41231 41144.47891 50453.06285 53455.29403 55961.58283 47663.76569 48067.33366 58121.81093 39950.44964 1.328237373 1.21654231 1.029887755 1.262890989 1.33803986 1.400774793 1.193072071 1.203173784 1.454847478 1 15.28592412 -4.750763856 23.9877689 1.241422701 1.328237684 0.038420391 0.137182631 1214.446223 2728536.608 0.03406493 0.464465043 1.78E-05 4.750763856 0.086814983 DVNSS(ph)SPVMLAFK ddPTM_A459_MK2206_30min_R2 2 DVNSSSPVMLAFK 13 0 C4P0D4;Q5VVQ1;C4P0D6;C4P0D8;Q99598;Q9NRI2 C4P0D4 DISC1;TSNAX;TRAX Translin-associated protein X 1 DVNS(0.006)S(0.921)S(0.073)PVMLAFK;DVNS(0.004)S(0.498)S(0.498)PVMLAFK 263.15 5.72E-30 15815200 70102 74882 71477 82199 73175 76743 79799 63638 61876 80406 TRUE FALSE 75469.06302 71163.46877 73860.00751 75483.07876 70301.78183 79663.50864 69321.29544 71955.7051 67257.86263 77782.3588 0.970259377 0.914904997 0.949572739 0.970439569 0.903826818 1.024184788 0.891221307 0.925090293 0.864693019 1 16.24715537 DVNSSS(ph)PVMLAFK ddPTM_A459_MK2206_30min_R2 1 DVNSSSPVMLAFK 13 0 C4P0D4;Q5VVQ1;C4P0D6;C4P0D8;Q99598;Q9NRI2 C4P0D4 DISC1;TSNAX;TRAX Translin-associated protein X 1 DVNSS(0.025)S(0.975)PVMLAFK 246.66 1.06E-22 12371000 60039 67269 65779 77852 65559 68398 72029 48696 62852 62729 TRUE FALSE 64635.632 63928.51928 67972.03903 71491.24256 62984.82425 71000.93382 62571.50578 55060.7344 68318.75335 60682.15787 1.06515052 1.053497791 1.120132201 1.178126241 1.03794635 1.170046292 1.031135147 0.907362828 1.125845813 1 15.88898477 -7.505802087 24.49975403 1.003812398 1.102732602 0.304761724 0.065391915 630.7540659 904942.497 0.026865644 0.017608804 3.12E-08 7.505802087 0.098920203 DVPDGPLLREET(ph)YDVPPAFAK ddPTM_A459_MK2206_30min_R1 2 DVPDGPLLREETYDVPPAFAK 21 1 P56945-6;A0A2R8Y6M6;A0A2R8Y5C9;A0A2R8Y8C4;A0A2R8YFS8;A0A2R8Y5E4;A0A2R8Y4C2;A0A2R8YFK2;A0A2R8Y596;P56945;P56945-8;P56945-2;P56945-3;P56945-5;P56945-7;P56945-4;H3BN62 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 DVPDGPLLREET(0.546)Y(0.454)DVPPAFAK;DVPDGPLLREET(0.868)Y(0.132)DVPPAFAK 85.636 0.0015061 6969700 2335.33 2248.98 2351.54 2516.93 2493.7 2366.34 1722.43 2420.6 1583.99 936.32 TRUE FALSE 2136.69792 2102.570993 2191.924017 2710.784385 2394.370649 2500.320126 1607.529837 2399.436949 1748.651429 1052.31839 2.030467147 1.998036918 2.082947553 2.576011604 2.275329093 2.376011052 1.527607853 2.280143511 1.661713265 1 10.03935556 -8.848386713 0.726076321 0.986750751 2.194243379 0.641131079 0.265834653 0.778518486 0.787134285 0.28086715 0.100120854 1.42E-09 8.848386713 1.207492628 DVPGGGPSSSAPAGAEADGPKAS(ph)PEAR ddPTM_A459_MK2206_30min_R2 2 DVPGGGPSSSAPAGAEADGPKASPEAR 27 1 Q8N3F8;B0QY86 Q8N3F8 MICALL1 MICAL-like protein 1 1 DVPGGGPSS(0.001)S(0.001)APAGAEADGPKAS(0.998)PEAR;DVPGGGPSSSAPAGAEADGPKAS(1)PEAR 112.41 3.18E-10 14438300 54003 47541 47734 40887 33126 31379 56467 41544 29117 54972 TRUE FALSE 58137.5112 45180.18307 49325.42774 37546.40131 31825.3068 32573.14983 49052.81507 46973.94344 31649.54403 53178.26814 1.093256949 0.849598617 0.927548592 0.706047839 0.598464521 0.612527466 0.9224222 0.883329696 0.59515936 1 15.69854917 -4.563226405 1.113008838 0.757694969 1.367841888 0.31340585 0.141024603 3.12314182 2.344422903 0.04503553 2.511197005 2.73E-05 4.563226405 0.61014692 DVPPDILLDS(ph)PER ddPTM_A459_MK2206_30min_R1 3 DVPPDILLDSPER 13 0 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 DVPPDILLDS(1)PER;DVPPDILLDS(1)PER;DVPPDILLDS(1)PER 198.87 0.00014327 13743200 6775.68 5749.86 5951.35 5338.4 6594.69 5851.74 6503.72 5773.33 5273.49 4529.82 TRUE FALSE 6199.372835 5375.543069 5547.388943 5749.564493 6332.009533 6183.060462 6069.868706 5722.854384 5821.688157 5091.0083 1.21771022 1.055889669 1.089644451 1.129356731 1.243763349 1.214506066 1.192272404 1.124110205 1.143523604 1 12.3137357 -9.0631789 1.39717328 1.000057095 1.157934279 0.410321258 0.056776242 3.332787404 7.504246929 0.060186777 0.017595791 8.65E-10 9.0631789 0.157877184 DVPPDILLDS(ph)PER ddPTM_A459_MK2206_30min_R2 9 DVPPDILLDSPER 13 0 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 DVPPDILLDS(1)PER;DVPPDILLDS(1)PER;DVPPDILLDS(1)PER;DVPPDILLDS(1)PER;DVPPDILLDS(1)PER;DVPPDILLDS(1)PER;DVPPDILLDS(1)PER;DVPPDILLDS(1)PER;DVPPDILLDS(1)PER 134.37 0.001568 648970 38342.7 51569.5 42536 46011.6 45305.8 44708.6 46974.8 34127.3 37894.5 43834.5 TRUE FALSE 41278.24659 49008.63362 43954.12901 42252.3051 43526.86665 46410.0171 40806.95233 38587.85529 41190.49511 42404.18385 0.973447496 1.155749956 1.036551703 0.996418307 1.026475755 1.094467878 0.962333162 0.910001131 0.97137809 1 15.371919 -7.357166418 6.848135869 0.952225403 1.048240632 0.394132591 0.052021108 0.248389996 15.25589213 0.021770609 0.014592504 4.39E-08 7.357166418 0.096015228 DVPPDILLDS(ph)PERK ddPTM_A459_MK2206_30min_R1 2 DVPPDILLDSPERK 14 1 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK 111.58 0.0019958 37255000 15771.4 14800.1 15321.9 14406 14089.8 12289.7 13557.3 13504.6 13210.3 13059 TRUE FALSE 14429.95961 13836.6108 14281.89212 15515.55262 13528.57343 12985.53219 12652.91725 13386.53071 14583.55796 14676.84751 0.983178411 0.942750873 0.973089903 1.057144772 0.921762894 0.884763038 0.862100478 0.91208488 0.993643761 1 13.8412545 -6.469602501 24.98775098 0.918804813 0.985202565 0.250942211 0.048725301 421.8868762 197874.0804 0.015522518 0.017600778 3.39E-07 6.469602501 0.066397752 DVPPDILLDS(ph)PERK ddPTM_A459_MK2206_30min_R2 4 DVPPDILLDSPERK 14 1 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK 76.728 0.02137 10944880 51586.2 60714.4 54416.8 50171.9 48750.8 44541.8 57825.6 41087.2 41838 51534.8 TRUE FALSE 55535.67914 57699.41118 56231.02895 46072.69528 46836.59864 46236.86941 50233.02926 46457.43811 45476.99361 49853.2237 1.113983711 1.15738576 1.127931652 0.924166821 0.93948987 0.927459971 1.007618475 0.931884333 0.912217711 1 15.60539918 -5.755717289 24.99689545 0.947290169 1.135528979 0.878146954 0.031422377 41.75482471 182403.1019 0.008507755 0.014234538 1.76E-06 5.755717289 0.18823881 DVPSPGGLSAPSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 DVPSPGGLSAPSSPR 15 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 DVPSPGGLSAPS(0.291)S(0.709)PR 139.77 0.00040182 0 41316 37976 33969 34464 35553 31285 41239 27608 31480 33120 TRUE FALSE 44479.18473 36090.16706 35101.50951 31648.18096 34157.01058 32475.5726 35824.26976 31216.46039 34218.0735 32039.29711 1.388269679 1.12643442 1.095576766 0.987792611 1.066097376 1.013616887 1.118135321 0.974317891 1.068003252 1 14.96755488 -4.295768255 1.282891791 1.036580894 2.080398271 0.853672878 0.043539581 1.37833359 0.845966865 0.011906469 2.566279608 5.06E-05 4.295768255 1.043817377 DVQIGDIVTVGECRPLSK ddPTM_A459_MK2206_30min_R1 2 DVQIGDIVTVGECRPLSK 18 1 P62280;M0R1H5 P62280 RPS11 40S ribosomal protein S11 0 ; 204.07 1.87E-10 21547000 2948.8 3027.9 3130.6 2749.9 3094.5 2885 2759.7 2844.9 2406.4 2226.1 FALSE TRUE 2697.989075 2830.78316 2918.103594 2961.697774 2971.239512 3048.346207 2575.605448 2820.027339 2656.553891 2501.886074 1.078382067 1.131459657 1.1663615 1.183786026 1.187599844 1.218419271 1.02946552 1.127160572 1.061820488 1 11.28880038 -8.169058654 0.893357394 1.007207553 1.156748393 0.487108282 0.049795831 0.494170477 0.804114645 0.04893787 0.018207868 6.78E-09 8.169058654 0.149540841 DVQS(ph)ADVEGFK ddPTM_A459_MK2206_30min_R1 1 DVQSADVEGFK 11 0 Q9UJT1-3;Q9UJT1-4;Q9UJT1-2;Q9UJT1 Q9UJT1-3 TUBD1 Tubulin delta chain 1 DVQS(1)ADVEGFK 84.365 0.036385 10909000 4822.9 4505.7 4750.9 3803.6 4922.9 3901.2 5044.5 4313.9 3932.2 4471.6 TRUE FALSE 4412.687029 4212.378111 4428.422145 4096.553931 4726.810469 4122.082573 4707.990609 4276.184027 4340.966262 5025.575567 0.8780461 0.838188195 0.881177108 0.815141246 0.940551068 0.820220991 0.936806252 0.850884435 0.863774946 1 12.29507312 -14.52287874 0.333490465 2.346876404 0.864650222 0.480363615 0.040699135 301.7875298 2.587448252 288.6408643 0.031294951 3.00E-15 14.52287874 -1.482226182 DVQS(ph)PGFLNEPLSSK ddPTM_A459_MK2206_30min_R2 1 DVQSPGFLNEPLSSK 15 0 H0YCZ2;Q8NG31-4;Q8NG31-2;Q8NG31;E9PPJ1;Q8NG31-3 H0YCZ2 CASC5 Protein CASC5 1 DVQS(1)PGFLNEPLSSK 128.99 0.00092215 2492400 20895 17334 16346 16890 18214 15873 16924 13021 12032 18912 TRUE FALSE 22494.73727 16473.21877 16890.96748 15510.03297 17498.82684 16477.05814 14701.85847 14722.88941 13078.52161 18294.90299 1.22956308 0.90042668 0.923260839 0.847778913 0.956486452 0.900636541 0.803604068 0.80475362 0.714872422 1 14.15915415 -2.243625122 1.197841558 0.857398391 199.9582095 0.644640909 0.079318736 493.9530711 1.776884038 0.023868849 268990.1794 0.005706566 2.243625122 199.1008111 DVS(ph)SPDENNGQSK ddPTM_A459_MK2206_30min_R1 1 DVSSPDENNGQSK 13 0 J3QL74;J3QLI2;O43829 J3QL74 ZBTB14 Zinc finger and BTB domain-containing protein 14 1 DVS(0.5)S(0.5)PDENNGQSK 256.13 3.18E-24 4085400 2473.6 2809.4 2061.4 2521.7 2294.6 1944.1 2300.5 2206.7 1555 2170.6 TRUE FALSE 2263.207331 2626.507549 1921.477911 2715.921771 2203.201223 2054.173262 2147.037842 2187.407055 1716.647815 2439.510315 0.927730175 1.076653594 0.787649021 1.113306123 0.903132571 0.842043278 0.880110172 0.896658252 0.703685409 1 11.25237587 -6.513292556 23.55417031 0.860524166 0.974797379 0.197697222 0.106245904 335.2151156 823659.3316 0.032147573 0.033991496 3.07E-07 6.513292556 0.114273213 DVS(ph)SPDENNGQSK ddPTM_A459_MK2206_30min_R2 1 DVSSPDENNGQSK 13 0 J3QL74;J3QLI2;O43829 J3QL74 ZBTB14 Zinc finger and BTB domain-containing protein 14 1 DVS(0.652)S(0.348)PDENNGQSK 201.09 0.00010139 7165800 28625 33806 29917 32433 27238 23027 31094 26837 23186 29071 TRUE FALSE 30816.55201 32127.2432 30914.41785 29783.12015 26168.49926 23903.30862 27011.32045 30344.68805 25202.67637 28122.41565 1.095800318 1.142406954 1.099280312 1.059052697 0.930521033 0.84997352 0.960490762 1.079021391 0.896177508 1 14.7794329 -6.067023446 3.155839811 0.952286377 1.11380467 0.609658005 0.058425616 0.183784504 3.590745426 0.019009145 0.026654677 8.57E-07 6.067023446 0.161518293 DVSGFSDPYCLLGIEQGVGVPGGSPGS(ph)R ddPTM_A459_MK2206_30min_R1 1 DVSGFSDPYCLLGIEQGVGVPGGSPGSR 28 0 K7EIH3;K7EQ37;K7EN81;Q70J99-2;Q70J99;Q70J99-3 K7EIH3 UNC13D Protein unc-13 homolog D 1 DVSGFSDPYCLLGIEQGVGVPGGS(0.415)PGS(0.585)R 138.09 1.12E-12 8763400 969.24 1046 919.5 1033.4 1222.3 1048.1 1182.1 1110 1102.7 1153.2 TRUE FALSE 886.8010483 977.9052099 857.0869019 1112.992647 1173.613203 1107.442516 1103.244266 1100.295387 1217.329611 1296.067122 0.684224631 0.754517411 0.661298236 0.858746147 0.905518844 0.85446386 0.851224637 0.848949386 0.939248894 1 10.33992472 -2.564556886 0.16772601 1.010145663 1.20E-10 0.755709421 0.050366411 23.28498328 0.339963795 0.15337504 5.499000335 0.002725481 2.564556886 -1.010145663 DVSHS(ph)SPVDLK ddPTM_A459_MK2206_30min_R2 2 DVSHSSPVDLK 11 0 Q96JN0-2;Q96JN0 Q96JN0-2 LCOR Ligand-dependent corepressor 1 DVS(0.014)HS(0.875)S(0.111)PVDLK;DVS(0.001)HS(0.572)S(0.427)PVDLK 80.905 0.028376 8396300 168405 177146 190135 194201 176122 147312 196107 176686 154374 188371 TRUE FALSE 181298.2163 168349.1872 196474.006 178334.1571 169206.5653 152918.0614 170357.9153 199779.4669 167801.1715 182224.4697 0.994916965 0.923856096 1.07819771 0.978650987 0.928561162 0.839174133 0.934879468 1.096337211 0.92084873 1 17.47535718 DVSS(ph)PDENNGQSK ddPTM_A459_MK2206_30min_R1 1 DVSSPDENNGQSK 13 0 J3QL74;J3QLI2;O43829 J3QL74 ZBTB14 Zinc finger and BTB domain-containing protein 14 1 DVS(0.004)S(0.996)PDENNGQSK 279.65 1.66E-48 4485600 2474.3 2303.3 1974.1 1842.3 1955.8 1771.9 2146.9 1598.6 1026.6 1807.2 TRUE FALSE 2263.847792 2153.354751 1840.103592 1984.194265 1877.896345 1872.223447 2003.684218 1584.623609 1133.318744 2031.08958 1.114597709 1.060196839 0.905968703 0.976911253 0.924575835 0.921782803 0.986507064 0.780184008 0.557985603 1 10.98803815 -7.798519021 5.231167081 0.746229595 0.979711687 0.384645796 0.116965746 0.17611081 11.61490388 0.062789089 0.03036034 1.59E-08 7.798519021 0.233482091 DVSS(ph)PDENNGQSK ddPTM_A459_MK2206_30min_R2 1 DVSSPDENNGQSK 13 0 J3QL74;J3QLI2;O43829 J3QL74 ZBTB14 Zinc finger and BTB domain-containing protein 14 1 DVS(0.007)S(0.993)PDENNGQSK 188.15 0.00014627 8030300 26857 28060 30155 33216 32857 28182 35211 28166 26486 35168 TRUE FALSE 28913.19257 26666.5812 31160.35265 30502.14655 31566.86909 29254.48576 30587.7534 31847.39291 28789.7044 34020.47104 0.849876315 0.783839271 0.915929489 0.896582135 0.92787866 0.85990831 0.899098468 0.936124396 0.846246496 1 15.0541155 -10.79296544 0.017252348 1.928747118 2.35E-06 0.441239176 0.042375324 1836.461029 5.482952108 342.372255 273.0430598 1.61E-11 10.79296544 -1.928744766 DVT(ph)PPPETEVVLIK ddPTM_A459_MK2206_30min_R1 7 DVTPPPETEVVLIK 14 0 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DVT(1)PPPETEVVLIK;DVT(0.999)PPPET(0.001)EVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK 200.19 0.00017117 423693900 40613.82 42817.04 38005.41 30109.54 32352.67 31379.89 38577.78 30705.87 41572.98 44902.64 TRUE FALSE 37159.40134 40029.64291 35425.70866 32428.58199 31063.99465 33156.59225 36004.32669 30437.41182 45894.64004 50465.51804 0.736332505 0.793207807 0.7019785 0.642588905 0.61554891 0.6570148 0.713444112 0.603132852 0.909425719 1 15.62301034 -8.417725381 4.368137198 0.996758116 0.684417793 0.800047259 0.055097378 0.09499944 2.81660602 0.058132611 0.015219882 3.82E-09 8.417725381 -0.312340323 DVT(ph)PPPETEVVLIK ddPTM_A459_MK2206_30min_R2 13 DVTPPPETEVVLIK 14 0 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DVT(1)PPPETEVVLIK;DVT(0.998)PPPET(0.002)EVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(0.99)PPPET(0.01)EVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK 194.77 0.00026005 225677600 1451572.4 1192048.2 1132861.4 1267526.3 1042303.7 844446.7 1290309.3 1096506.7 772602 1338313.8 TRUE FALSE 1562705.899 1132852.82 1170630.434 1163965.347 1001377.62 876582.7109 1120890.139 1239823.891 839801.5254 1294644.73 1.207053845 0.875029878 0.904209785 0.899061588 0.773476766 0.677083597 0.865789751 0.957655688 0.648673343 1 20.30412482 -2.042795485 1.098580266 0.826273447 200 0.503464539 0.107928911 655.476854 2.014168667 0.032294346 327461.646 0.009061592 2.042795485 199.1737265 DVT(ph)SPINER ddPTM_A459_MK2206_30min_R2 3 DVTSPINER 9 0 K7ERF3;K7ELU8;D3DUE4;F6WF08;Q6ZW76-2;Q6ZW76;K7EJY2 K7ERF3 ANKS3 Ankyrin repeat and SAM domain-containing protein 3 1 DVT(0.925)S(0.075)PINER;DVT(0.607)S(0.393)PINER;DVT(0.5)S(0.5)PINER 138.76 0.0057026 183942000 607000 763070 727930 761830 758070 718700 761490 598090 671690 617640 TRUE FALSE 653472.3867 725177.0534 752198.8229 699586.052 728304.3628 746050.6321 661505.4483 676262.4166 730112.3821 597486.4574 1.093702424 1.213712954 1.258938698 1.170881856 1.218947064 1.248648606 1.107147183 1.131845598 1.221973106 1 19.18854649 -11.88924577 0.335651655 0.73926488 1.197091732 0.496335029 0.055481013 42.15948459 1.775789649 8.178567358 0.04763924 1.29E-12 11.88924577 0.457826852 DVTGS(ph)PPAK ddPTM_A459_MK2206_30min_R1 1 DVTGSPPAK 9 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 DVT(0.194)GS(0.806)PPAK 108.7 0.01186 35797000 4306.3 4429.8 4145.8 3797.8 4238.7 4133.8 3612.7 3357.4 3862.8 3399.4 TRUE FALSE 3940.026572 4141.419215 3864.394647 4090.307214 4069.863603 4367.852184 3371.703375 3328.046606 4264.351883 3820.543336 1.031273886 1.083986975 1.011477768 1.070608773 1.065257804 1.143254192 0.882519338 0.871092489 1.116163725 1 11.89956211 -7.262462144 24.99971175 0.956701598 1.065859522 0.318070036 0.07115466 107.1908784 2620066.202 0.028346846 0.020328338 5.46E-08 7.262462144 0.109157924 DVTGS(ph)PPAK ddPTM_A459_MK2206_30min_R2 4 DVTGSPPAK 9 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 DVT(0.191)GS(0.809)PPAK;DVT(0.001)GS(0.999)PPAK;DVT(0.376)GS(0.624)PPAK;DVT(0.028)GS(0.972)PPAK 113.93 0.0088319 91912100 617662 664956 640708 604510 737210 615903 755875 597626 594567 717594 TRUE FALSE 664950.6776 631935.252 662068.8849 555119.5993 708263.4312 639341.6202 656627.7045 675737.7702 646281.3629 694178.9665 0.957895168 0.910334773 0.953743799 0.79967793 1.020289386 0.921004022 0.945905503 0.973434522 0.931001073 1 19.40494813 DVTIGGSAPIY(ph)VK ddPTM_A459_MK2206_30min_R2 2 DVTIGGSAPIYVK 13 0 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 DVTIGGS(0.018)APIY(0.982)VK;DVTIGGSAPIY(1)VK 224.58 4.38E-08 8124000 50183 56904 56733 61342 52187 44616 58127 42696 43305 59643 TRUE FALSE 54025.04906 54078.23011 58624.4499 56330.16238 50137.87616 46313.89314 50494.85508 48276.5138 47071.59062 57696.85379 0.936360399 0.937282132 1.016077066 0.976312549 0.868988045 0.802710895 0.875175192 0.836726972 0.815843283 1 15.81620503 -6.300294516 5.527492083 0.854876019 0.968113859 0.43245627 0.055211114 0.164487492 13.65503974 0.016468967 0.019104768 5.01E-07 6.300294516 0.11323784 DVTNFTVGGFAPMS(ph)PR ddPTM_A459_MK2206_30min_R1 5 DVTNFTVGGFAPMSPR 16 0 O00267-2;O00267 O00267-2 SUPT5H Transcription elongation factor SPT5 1 DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR 274.16 6.98E-51 493209500 10143.34 9409.62 9737.3 9161.06 9898.18 9023.31 9730.5 9341.98 8337.95 8362.29 TRUE FALSE 9280.595668 8797.052028 9076.359206 9866.646429 9503.914531 9534.202014 9081.396099 9260.304054 9204.70974 9398.273617 0.98747877 0.936028508 0.965747495 1.049836048 1.011240459 1.014463124 0.966283433 0.985319691 0.979404316 1 13.19818006 -5.551438701 24.99984717 1.00048199 0.959037176 0.336195859 0.024350154 224.1897026 196242.6299 0.006966118 0.012065893 2.81E-06 5.551438701 -0.041444814 DVTNFTVGGFAPMS(ph)PR ddPTM_A459_MK2206_30min_R2 6 DVTNFTVGGFAPMSPR 16 0 O00267-2;O00267 O00267-2 SUPT5H Transcription elongation factor SPT5 1 DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFT(0.001)VGGFAPMS(0.999)PR;DVTNFTVGGFAPMS(1)PR 181.86 9.47E-07 228750000 153777.5 171739.2 175934 190814.7 180771.5 185319.9 166765.5 137527.1 166676.3 177295.8 TRUE FALSE 165550.8236 163210.8811 181799.5518 175224.5286 173673.5026 192372.3787 144868.9895 155502.3642 181173.5033 171510.6526 0.965250969 0.951607837 1.059989855 1.021653909 1.012610587 1.121635162 0.844664675 0.906663008 1.056339653 1 17.38793866 -7.26234161 24.99954498 0.944138758 1.020186685 0.198612351 0.068312283 132.8591916 3681262.905 0.028014545 0.020079891 5.47E-08 7.26234161 0.076047927 DVTNNVHYENYR ddPTM_A459_MK2206_30min_R1 4 DVTNNVHYENYR 12 0 E7EPK1;G3V1Q4;Q16181;Q16181-2;E7ES33 E7EPK1 Sep-07 Septin-7 0 ;;; 128.57 0.0034184 48794700 20624.5 20406.7 19673.1 17487.6 21513.5 18812.2 21112 19488.9 17454.8 16326.4 FALSE TRUE 18870.27797 19078.22012 18337.74478 18834.49798 20656.57174 19877.33051 19703.657 19318.5106 19269.28892 18349.03769 1.028406955 1.039739546 0.999384551 1.026456989 1.125757769 1.08329008 1.073825087 1.052835082 1.050152561 1 14.16341678 -6.040649842 24.99026458 1.069079406 1.022347817 0.285389914 0.031140755 576.1872579 354221.4614 0.009129286 0.011787951 9.11E-07 6.040649842 -0.04673159 DVTNNVHYENYR ddPTM_A459_MK2206_30min_R2 1 DVTNNVHYENYR 12 0 E7EPK1;G3V1Q4;Q16181;Q16181-2;E7ES33 E7EPK1 Sep-07 Septin-7 0 98.368 0.021564 8671800 43007 57956 56902 63117 66523 55382 53417 51960 52376 51571 FALSE TRUE 46299.64899 55077.98932 58799.08428 57960.1392 63910.97277 57489.60082 46403.28373 58751.35041 56931.56981 49888.24249 0.92806735 1.104027453 1.178616069 1.16179958 1.281082868 1.152367731 0.930144688 1.177659253 1.141182109 1 15.60641223 -10.42876003 14.80090221 1.000002022 1.122074675 0.100120928 0.104514437 0 0 0.105074133 0.02548422 3.73E-11 10.42876003 0.122072654 DVTVLS(ph)VAEEQDLLKQER ddPTM_A459_MK2206_30min_R1 1 DVTVLSVAEEQDLLKQER 18 1 Q14966-3;Q14966;Q14966-5;A0A096LPK8 Q14966-3 ZNF638 Zinc finger protein 638 1 DVT(0.018)VLS(0.982)VAEEQDLLKQER 67.11 0.01657 1974800 603.17 605.58 655.19 530.98 683.11 636.47 542.12 432.65 376.01 486.12 TRUE FALSE 551.8672241 566.1566319 610.7175283 571.8761716 655.9002822 672.5063814 505.956164 428.8673867 415.0975851 546.3442156 1.010109027 1.036263615 1.117825559 1.046732363 1.200525719 1.230920658 0.926075814 0.78497653 0.759773002 1 9.093666375 -7.471562931 5.415391495 0.832815895 1.10518961 0.643762574 0.088356171 0.125350233 8.362153088 0.040072151 0.025932847 3.38E-08 7.471562931 0.272373715 DVVICPDASLEDAKK ddPTM_A459_MK2206_30min_R2 1 DVVICPDASLEDAKK 15 1 Q99497;K7ELW0;K7EN27 Q99497 PARK7 Protein deglycase DJ-1 0 78.505 0.044449 2921800 10369 14830 15583 16319 14919 13012 15927 13350 11029 15571 FALSE TRUE 11162.85861 14093.56376 16102.52944 14985.6855 14333.2051 13507.18078 13835.76577 15094.89084 11988.28248 15062.91955 0.741082005 0.935646222 1.069017822 0.994872571 0.951555577 0.896717315 0.918531479 1.002122516 0.795880403 1 13.8787138 -1.522966653 0.005399061 1.812062913 9.44E-06 0.026831847 0.09309011 319735.8565 134.2229763 20794.07275 24386.78558 0.029993928 1.522966653 -1.812053475 DVVLST(ph)SPK ddPTM_A459_MK2206_30min_R2 1 DVVLSTSPK 9 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 DVVLS(0.147)T(0.706)S(0.147)PK 106.16 0.031175 13730000 93176 87204 93015 73087 92072 62472 112410 76059 71688 114270 TRUE FALSE 100309.6262 82873.57617 96116.07368 67115.55831 88456.79066 64849.41574 97650.43197 86000.17245 77923.29266 110541.3793 0.907439611 0.74970637 0.869503116 0.607153256 0.800214284 0.586652855 0.883383513 0.777990767 0.704924194 1 16.75422699 -11.00289309 7.83677245 0.999999998 0.762809061 0.316038564 0.103562314 3.45E-05 2.29E-06 0.095816633 0.023236995 9.93E-12 11.00289309 -0.237190937 DVVLSTS(ph)PK ddPTM_A459_MK2206_30min_R1 1 DVVLSTSPK 9 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 DVVLS(0.056)T(0.353)S(0.591)PK 109.79 0.011227 30980000 8832.8 10839 11597 10086 6782.2 6152.5 7100.1 7985.8 9605.3 8345.3 TRUE FALSE 8081.523977 10133.37913 10809.82795 10862.82547 6512.050612 6500.849233 6626.465284 7915.980993 10603.80531 9379.178768 0.861645159 1.080412196 1.15253459 1.158185139 0.694309254 0.693114972 0.706508048 0.843995108 1.130568632 1 13.19524589 -6.255681787 24.98957009 0.822455307 1.070805577 0.324538128 0.15220684 538.3613591 2336637.653 0.047768795 0.059971799 5.55E-07 6.255681787 0.24835027 DVVLSTS(ph)PK ddPTM_A459_MK2206_30min_R2 3 DVVLSTSPK 9 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 DVVLS(0.038)T(0.026)S(0.936)PK;DVVLS(0.001)T(0.361)S(0.638)PK;DVVLS(0.031)T(0.141)S(0.828)PK 150.09 0.0013564 82888800 521147 468053 471252 381284 443761 310445 552843 383886 313442 527426 TRUE FALSE 561046.415 444810.1686 486963.3065 350131.8775 426336.7134 322259.202 480254.05 434061.2183 340704.6186 510216.1328 1.099625 0.871807338 0.954425537 0.686242271 0.835600221 0.631613117 0.941275705 0.850739893 0.66776528 1 18.96074899 -4.161030825 1.022185904 0.802220279 1.773414608 0.334719144 0.118843545 6.259175448 2.164164042 0.036157986 9.029932609 6.90E-05 4.161030825 0.971194329 DVVMLDNLPDLPPALVPS(ph)PPKR ddPTM_A459_MK2206_30min_R1 1 DVVMLDNLPDLPPALVPSPPKR 22 1 H3BPY8;H3BPM3;H3BRE8;Q9BWH6-2;Q9BWH6 H3BPY8 RPAP1 RNA polymerase II-associated protein 1 1 DVVMLDNLPDLPPALVPS(1)PPKR 74.516 0.0013877 4357100 1210.5 1267 1160.6 1135.3 1111.8 908.63 907.69 910.82 1100.6 1031.7 TRUE FALSE 1107.540618 1184.51807 1081.821706 1222.741003 1067.514652 960.0758454 847.1396563 902.8567968 1215.011309 1159.514785 0.955175935 1.021563576 0.93299518 1.054528169 0.920656352 0.827997933 0.730598408 0.778650526 1.047861851 1 10.1793055 -6.526169759 5.234760332 0.855216321 0.989447385 0.227629948 0.094815584 0.223117268 19.07244666 0.031180499 0.032724104 2.98E-07 6.526169759 0.134231064 DVVMLDNLPDLPPALVPS(ph)PPKR ddPTM_A459_MK2206_30min_R2 4 DVVMLDNLPDLPPALVPSPPKR 22 1 H3BPY8;H3BPM3;H3BRE8;Q9BWH6-2;Q9BWH6 H3BPY8 RPAP1 RNA polymerase II-associated protein 1 1 DVVMLDNLPDLPPALVPS(1)PPKR;DVVMLDNLPDLPPALVPS(1)PPKR;DVVMLDNLPDLPPALVPS(1)PPKR;DVVMLDNLPDLPPALVPS(1)PPKR 115.06 1.73E-05 39856600 223834.1 238089.5 213525.3 200651.6 251946.1 154412 263417.4 195832.9 198122.9 239721.8 TRUE FALSE 240971.0108 226266.3216 220644.1269 184257.7224 242053.4302 160288.2569 228830.379 221428.9324 215355.2717 231899.6973 1.039117401 0.975707706 0.951463626 0.794557839 1.04378502 0.69119649 0.986764457 0.954847872 0.928656976 1 17.82314141 -5.075793143 2.103070772 0.910627052 1.038584769 0.129625579 0.098326484 0.783287188 5.75522138 0.025810939 0.150849009 8.40E-06 5.075793143 0.127957717 DVWS(ph)APSSLR ddPTM_A459_MK2206_30min_R1 1 DVWSAPSSLR 10 0 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 DVWS(0.972)APS(0.014)S(0.014)LR 101.39 0.016405 9291300 1803.6 1805.3 1466.2 1584.3 1807.3 1679.4 1791.6 1826.5 1307.1 1288.6 TRUE FALSE 1650.194349 1687.774642 1366.678429 1706.323061 1735.311414 1774.486177 1672.085633 1810.531103 1442.977723 1448.241496 1.139446945 1.165395858 0.943681308 1.178203404 1.198219647 1.225269529 1.154562714 1.250158283 0.996365403 1 10.50008648 -2.961816823 2.318829117 1.134571079 38.53790258 0 0.101257369 36898.50034 84.03844294 0.025454732 7360136.197 0.001091901 2.961816823 37.4033315 DVWSAPS(ph)SLR ddPTM_A459_MK2206_30min_R1 2 DVWSAPSSLR 10 0 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 DVWS(0.402)APS(0.592)S(0.007)LR;DVWS(0.386)APS(0.586)S(0.028)LR 101.35 0.016452 15102400 4157.5 4543.8 4124.3 3425.5 4010.3 3158.1 3969.7 3862.5 4157.8 3929.5 TRUE FALSE 3803.882793 4247.997794 3844.354007 3689.332604 3850.561259 3336.908893 3704.888556 3828.73057 4590.018189 4416.316126 0.861324843 0.961887164 0.870488864 0.835386892 0.871894391 0.755586511 0.838909274 0.866951201 1.039331891 1 12.10862773 -8.249483308 13.26816389 1.01967241 0.85737492 0.642028258 0.048344318 0.92138768 1026.549955 0.037461838 0.013380247 5.63E-09 8.249483308 -0.16229749 DVWSAPS(ph)SLR ddPTM_A459_MK2206_30min_R2 1 DVWSAPSSLR 10 0 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 DVWS(0.303)APS(0.664)S(0.033)LR 93.839 0.024656 4106600 13673 13206 12993 16699 13811 15814 16546 11548 10157 15837 TRUE FALSE 14719.81539 12550.20924 13426.18014 15334.63828 13268.71075 16415.81285 14373.49032 13057.36325 11040.4375 15320.23999 0.960808408 0.819191426 0.876368787 1.000939822 0.866090267 1.071511469 0.938202687 0.852294955 0.7206439 1 13.90315128 DVYHLNR ddPTM_A459_MK2206_30min_R1 1 DVYHLNR 7 0 I3L2Z5;A0A087WWR2;P56270-3;P56270;P56270-2;J3QSH4;Q14119;Q9HBE1-4;Q9HBE1-2;Q9HBE1-3;Q9HBE1 I3L2Z5 MAZ;VEZF1;PATZ1 "Myc-associated zinc finger protein;Vascular endothelial zinc finger 1;POZ-, AT hook-, and zinc finger-containing protein 1" 0 94.407 0.034359 1918800 1517.9 1485.8 1466 1448.6 1629.4 1600 1133.4 1461 1189.8 1197.1 FALSE TRUE 1388.794634 1389.07415 1366.492005 1560.171423 1564.497548 1690.590617 1057.792954 1448.226631 1313.483968 1345.405786 1.032249637 1.032457393 1.015672758 1.159628894 1.162844373 1.256565592 0.786225959 1.076423668 0.976273465 1 10.39382565 -7.253894923 24.99979175 0.96609941 1.106766326 0.365608746 0.096711065 728.5707108 2414243.285 0.039055293 0.029653506 5.57E-08 7.253894923 0.140666916 DVYHLNR ddPTM_A459_MK2206_30min_R2 2 DVYHLNR 7 0 I3L2Z5;A0A087WWR2;P56270-3;P56270;P56270-2;J3QSH4;Q14119;Q9HBE1-4;Q9HBE1-2;Q9HBE1-3;Q9HBE1 I3L2Z5 MAZ;VEZF1;PATZ1 "Myc-associated zinc finger protein;Vascular endothelial zinc finger 1;POZ-, AT hook-, and zinc finger-containing protein 1" 0 ; 110.34 0.02172 4859900 44499 55365 47602 60849 49060 54793 57373 48851 47279 52067 FALSE TRUE 47905.87765 52615.65461 49189.02692 55877.44205 47133.65789 56878.18601 49839.85618 55235.99343 51391.24196 50368.05805 0.951116233 1.044623451 0.97659169 1.109382498 0.935784696 1.129251121 0.989513158 1.096647271 1.020314142 1 15.62022149 -3.707328184 1.300736451 1.038100871 2.77E-11 0.136198026 0.059637312 36.47078674 5.897956468 0.01569321 94.35734778 0.000196188 3.707328184 -1.038100871 DVYLS(ph)PR ddPTM_A459_MK2206_30min_R1 2 DVYLSPR 7 0 H3BT71;H0Y6E7;P38159;P38159-2;H3BUY5;Q96E39 H3BT71;P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 1 DVYLS(1)PR;DVYLS(1)PR 120.87 0.0091095 3426100000 25830.2 25523.5 24298.5 20356.7 23087.3 22489.3 24707.5 20524.1 21540.3 19201.9 TRUE FALSE 23633.20585 23861.91551 22649.18552 21924.57656 22167.68395 23762.62473 23059.30776 20344.65996 23779.49127 21580.77634 1.095104526 1.105702368 1.049507449 1.015930855 1.027195853 1.101101478 1.068511503 0.942721413 1.101883032 1 14.39745914 -1.522878746 0.41750307 1.030871172 2.464821199 0.19067415 0.046282091 130.2271538 1.676404566 0.031846925 155.6732902 0.03 1.522878746 1.433950027 DVYLS(ph)PR ddPTM_A459_MK2206_30min_R2 5 DVYLSPR 7 0 H3BT71;H0Y6E7;P38159;P38159-2;H3BUY5;Q96E39 H3BT71;P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 1 DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR 91.265 0.028563 5931487100 582992 690783 591167.6 733749 612330 675916 711865 524638 562821.4 606602 TRUE FALSE 627626.3158 656479.7207 610876.8327 673799.3596 588286.8475 701638.457 618396.2704 593209.988 611774.588 586808.6264 1.069558775 1.118728817 1.041015427 1.148243787 1.002519085 1.195685314 1.053829549 1.010908772 1.042545321 1 19.16253055 -7.51789054 24.4420255 1.02251003 1.095303148 0.316801187 0.051661947 201.6089601 987897.4102 0.021927698 0.013129037 3.03E-08 7.51789054 0.072793118 DVYLS(ph)PRDDGYSTK ddPTM_A459_MK2206_30min_R1 3 DVYLSPRDDGYSTK 14 1 H3BT71;H0Y6E7;P38159;P38159-2;H3BUY5;Q96E39 H3BT71;P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 1 DVYLS(1)PRDDGYSTK;DVYLS(0.711)PRDDGY(0.014)S(0.265)T(0.01)K;DVYLS(0.99)PRDDGYS(0.009)T(0.001)K 156.11 0.0015346 299362000 12676.8 12135.3 12330.7 19120.4 19169.4 11768.2 7685.2 15842.9 3830.24 850.59 TRUE FALSE 11598.57159 11345.28976 11493.72644 20593.05652 18405.84221 12434.50531 7172.53433 15704.3872 4228.407155 955.9675108 12.13280939 11.86786124 12.023135 21.54158618 19.25362734 13.00724677 7.502905956 16.42774155 4.423170355 1 9.900817778 -8.434764824 1.000285409 0.699044276 14.80328839 0.553815724 4.023804468 0.441328968 0.968777705 4.08650906 1.376665506 3.67E-09 8.434764824 14.10424411 DVYLS(ph)PRDDGYSTK ddPTM_A459_MK2206_30min_R2 3 DVYLSPRDDGYSTK 14 1 H3BT71;H0Y6E7;P38159;P38159-2;H3BUY5;Q96E39 H3BT71;P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 1 DVY(0.365)LS(0.628)PRDDGY(0.005)S(0.002)T(0.001)K;DVY(0.014)LS(0.947)PRDDGY(0.029)S(0.008)T(0.002)K;DVYLS(0.978)PRDDGYS(0.02)T(0.001)K 110.04 0.020769 21007300 20021.2 99008 43636 81317 137079 102542 82512 47494 124815 36256 TRUE FALSE 21554.03847 94091.40669 45090.80246 74673.14098 131696.5897 106444.3077 71678.07529 53701.62887 135671.1831 35072.96969 0.61454843 2.682732815 1.285628302 2.129079506 3.754931244 3.034938547 2.043684237 1.531140059 3.868254792 1 15.09807197 -4.755826879 24.80994668 2.399080369 0.61454528 0.242688647 0.929048381 241.6643821 1068149.885 0.229415442 1.953799449 1.75E-05 4.755826879 -1.784535089 DWEDDS(ph)DEDMSNFDR ddPTM_A459_MK2206_30min_R1 15 DWEDDSDEDMSNFDR 15 0 A0A087WYT3;Q15185-4;Q15185;Q15185-2;B4DDC6 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 1 DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(0.999)DEDMS(0.001)NFDR;DWEDDS(0.995)DEDMS(0.005)NFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(0.999)DEDMS(0.001)NFDR;DWEDDS(0.987)DEDMS(0.013)NFDR;DWEDDS(0.997)DEDMS(0.003)NFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(0.996)DEDMS(0.004)NFDR;DWEDDS(1)DEDMSNFDR 354.25 6.21E-174 3218462300 35185.31 38873.6 38069.94 25303.37 28374.54 30384.75 41076.26 30938.01 43132.12 47455.99 TRUE FALSE 32192.61462 36342.92157 35485.85854 27252.23994 27244.32199 32105.10829 38336.13764 30667.52224 47615.85822 53335.19632 0.60359044 0.681405977 0.665336607 0.510961651 0.510813194 0.601949754 0.718777473 0.574995957 0.892766157 1 15.70280027 -8.382351677 3.4260607 0.996774252 0.609148327 0.814743476 0.065188825 0.100808585 2.073204928 0.067703731 0.01809825 4.15E-09 8.382351677 -0.387625924 DWEDDS(ph)DEDMSNFDR ddPTM_A459_MK2206_30min_R2 27 DWEDDSDEDMSNFDR 15 0 A0A087WYT3;Q15185-4;Q15185;Q15185-2;B4DDC6 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 1 DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(0.996)DEDMS(0.004)NFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(0.99)DEDMS(0.01)NFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(0.809)DEDMS(0.191)NFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(0.995)DEDMS(0.005)NFDR;DWEDDS(0.999)DEDMS(0.001)NFDR;DWEDDS(0.993)DEDMS(0.007)NFDR;DWEDDS(0.994)DEDMS(0.006)NFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR 379.19 4.49E-239 4667209700 5133628.5 4484998.8 4407526.2 4474506.6 4119376.4 3772292.7 4799920.8 4016835 3241377.8 4828118.7 TRUE FALSE 5526663.045 4262280.281 4554470.924 4108925.098 3957628.984 3915849.942 4169685.433 4541849.126 3523306.982 4670577.582 1.183293275 0.912580983 0.975140835 0.879746675 0.847353227 0.838408071 0.892755844 0.972438429 0.754362158 1 22.15516954 -2.050768101 1.144734833 0.884551209 199.9999999 0.595089655 0.070568334 677.5653604 1.767967904 0.019823573 353186.254 0.00889676 2.050768101 199.1154487 DWEDDSDEDMS(ph)NFDR ddPTM_A459_MK2206_30min_R1 1 DWEDDSDEDMSNFDR 15 0 A0A087WYT3;Q15185-4;Q15185;Q15185-2;B4DDC6 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 1 DWEDDS(0.483)DEDMS(0.517)NFDR 141.06 0.00038699 11032000 1774.8 1692.7 1641.6 1687.7 1652.8 1519.7 1298.3 1594.4 1171.9 1489.4 TRUE FALSE 1623.84394 1582.504922 1530.172766 1817.686946 1586.965476 1605.744101 1211.692776 1580.460329 1293.723199 1673.918116 0.970085648 0.945389686 0.914126414 1.085887612 0.948054424 0.959272789 0.723866218 0.944168244 0.772871257 1 10.70901324 -7.03667145 24.91352717 0.853573139 0.972168144 0.292194863 0.08401716 652.9563594 443597.7937 0.030127157 0.023344337 9.19E-08 7.03667145 0.118595005 DWEDDSDEDMS(ph)NFDR ddPTM_A459_MK2206_30min_R2 1 DWEDDSDEDMSNFDR 15 0 A0A087WYT3;Q15185-4;Q15185;Q15185-2;B4DDC6 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 1 DWEDDS(0.192)DEDMS(0.808)NFDR 117.08 0.0021826 2750800 19122 15679 17306 16932 17935 17221 18784 16132 14506 20574 TRUE FALSE 20585.99502 14900.40366 17882.9734 15548.60144 17230.78178 17876.35722 16317.63824 18240.50779 15767.70566 19902.67206 1.034333227 0.748663476 0.898521231 0.781231856 0.865752183 0.898188804 0.819871733 0.916485371 0.79224064 1 14.28067451 -10.68782942 3.946911068 1.000059544 0.858664124 0.218102892 0.078368864 15696111.65 8500695.754 9031.581208 0.01716091 2.05E-11 10.68782942 -0.14139542 DWEDDSDEDMSNFDR ddPTM_A459_MK2206_30min_R1 1 DWEDDSDEDMSNFDR 15 0 A0A087WYT3;Q15185-4;Q15185;Q15185-2;B4DDC6 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 0 336.33 1.04E-126 12087000 1199.2 1239.3 1117.8 882.54 943.38 1008.8 1338.6 1027.7 1465.6 1306.4 FALSE TRUE 1097.201743 1158.621345 1041.92685 950.5133837 905.803177 1065.917384 1249.304436 1018.714927 1617.954365 1468.246695 0.747287051 0.789118987 0.709640181 0.64737989 0.616928463 0.725979761 0.850881831 0.693830901 1.101963567 1 10.51987867 -8.259102215 24.99819616 1.05098181 0.722769004 0.79485845 0.066723668 88.42169669 945781.8312 0.054456387 0.018320909 5.51E-09 8.259102215 -0.328212806 DWEDDSDEDMSNFDR ddPTM_A459_MK2206_30min_R2 3 DWEDDSDEDMSNFDR 15 0 A0A087WYT3;Q15185-4;Q15185;Q15185-2;B4DDC6 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 0 ;; 350.43 1.24E-165 30997000 103555 100013 101471 104727 95451 94065 127164 83109 75827 111781 FALSE TRUE 111483.2504 95046.49985 104853.9925 96170.46909 91703.11414 97644.70949 110467.214 93971.63166 82422.2954 108133.5951 1.030977009 0.878972901 0.969670826 0.889367166 0.848053873 0.903000676 1.021580887 0.869032714 0.762226534 1 16.72245529 -4.75448912 24.89749458 0.903950713 1.030977239 0.214263654 0.072559218 375.4306978 1344758.688 0.018084641 0.174671815 1.76E-05 4.75448912 0.127026526 DWEQFHQPR ddPTM_A459_MK2206_30min_R1 4 DWEQFHQPR 9 0 Q9H773 Q9H773 DCTPP1 dCTP pyrophosphatase 1 0 ;;; 135.55 0.0038174 29957000 17409.2 16843 17048.9 13240.6 17421.8 16269.5 19156.2 14817.5 16684.7 16350.7 FALSE TRUE 15928.45612 15746.51764 15891.66817 14260.39331 16727.85281 17190.66503 17878.32485 14687.95216 18419.13427 18376.34816 0.866791159 0.856890472 0.864789241 0.77601889 0.910292549 0.935477761 0.972898679 0.799285692 1.002328325 1 14.16556247 -6.476703224 11.1947237 0.930450903 0.843800588 0.388314958 0.058965827 1.154974753 278.1326747 0.017719595 0.020029026 3.34E-07 6.476703224 -0.086650315 DWILPSDYDHAEAEAR ddPTM_A459_MK2206_30min_R1 1 DWILPSDYDHAEAEAR 16 0 O43852-5;O43852;O43852-3;O43852-9;O43852-2;O43852-4;H0Y875;O43852-15 O43852-5 CALU Calumenin 0 157.58 0.00010576 3873500 2147.5 1532.3 1654.9 1409.5 1732.6 2023.1 2483.7 1789.7 2158.3 2093.8 FALSE TRUE 1964.843848 1432.546991 1542.569999 1518.059934 1663.586873 2137.646174 2318.016905 1774.052842 2382.663009 2353.195751 0.834968297 0.608766606 0.655521326 0.645105675 0.706947933 0.90840134 0.985050608 0.753890891 1.012522229 1 11.20040562 -6.744678916 4.537326122 0.921850971 0.678497373 0.652650669 0.088083398 0.124154546 6.157262096 0.029577531 0.028094908 1.80E-07 6.744678916 -0.243353598 DWILPSDYDHAEAEAR ddPTM_A459_MK2206_30min_R2 4 DWILPSDYDHAEAEAR 16 0 O43852-5;O43852;O43852-3;O43852-9;O43852-2;O43852-4;H0Y875;O43852-15 O43852-5 CALU Calumenin 0 ;;; 118.2 0.0025026 12175700 102105 98620 89333 101744 90209 96235 103231 83645 82639 98655 FALSE TRUE 109922.2373 93722.67421 92311.31763 93431.18974 86666.9414 99897.29036 89676.6457 94577.6887 89826.79084 95435.89543 1.151791334 0.982048461 0.967259931 0.978994217 0.908116815 1.046747557 0.939653212 0.991007506 0.941226469 1 16.54224438 -4.760958806 5.03178787 0.971034383 1.163260449 0.691956036 0.035889066 0.090607258 6.104606481 0.008298313 0.061758644 1.73E-05 4.760958806 0.192226066 DWQSYYYHHPQDR ddPTM_A459_MK2206_30min_R1 2 DWQSYYYHHPQDR 13 0 Q1KMD3 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 0 ; 101.38 0.0057319 15121300 7353.9 4469.5 7827.6 5295.6 8831.7 7084.4 10821.4 6114.9 3194.5 3031.4 FALSE TRUE 6728.412188 4178.534738 7296.284321 5703.46803 8479.914688 7485.512606 10099.52415 6061.438074 3526.579707 3406.952718 1.974906242 1.22647277 2.14158661 1.674067268 2.489002751 2.197128409 2.964386355 1.779137715 1.035112606 1 11.73426621 -5.284786242 24.67165286 1.998035275 1.600689291 0.024765658 0.59928048 1748.959439 1848199.626 0.15816182 0.329580977 5.19E-06 5.284786242 -0.397345984 DWQSYYYHHPQDR ddPTM_A459_MK2206_30min_R2 2 DWQSYYYHHPQDR 13 0 Q1KMD3 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 0 ; 136.93 0.00060227 10741800 47419 79984 36846 42148 70806 59024 50646 33155 42246 27762 FALSE TRUE 51049.4351 76012.11087 38074.42725 38704.37358 68025.80067 61270.19968 43996.11936 37488.47234 45920.48072 26856.12821 1.900848651 2.830345099 1.417718405 1.441174739 2.532971251 2.281423413 1.638215271 1.39590011 1.709869731 1 14.71296371 -8.210158601 0.739323958 1.048612263 2.065328687 0.33939598 0.441531034 0.777425905 0.928432939 0.44562283 0.183281628 6.16E-09 8.210158601 1.016716423 DWSHYFK ddPTM_A459_MK2206_30min_R1 2 DWSHYFK 7 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 ; 124.34 0.0092618 42747000 32836 29848 35221 27596 34374 43449 46587 37338 34351 29730 FALSE TRUE 30043.12577 27904.88977 32830.29665 29721.4487 33004.81079 45909.04483 43479.26623 37011.5578 37921.90938 33413.17685 0.899140058 0.835146263 0.982555379 0.889512806 0.987778293 1.373980243 1.301261069 1.10769347 1.134938756 1 15.02812954 -6.578761114 7.294103675 1.197251148 0.906866052 0.633440309 0.102070607 0.142081644 15.36535166 0.034612236 0.034662911 2.64E-07 6.578761114 -0.290385096 DWSHYFK ddPTM_A459_MK2206_30min_R2 1 DWSHYFK 7 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 111.82 0.020835 6802000 129830 144050 114380 161750 128850 122750 149910 117800 134090 112920 FALSE TRUE 139769.8846 136896.6865 118193.3721 148534.5076 123790.7016 127421.3373 130226.6369 133196.8645 145752.9058 109235.4296 1.279528859 1.253226054 1.082005834 1.359764941 1.133246804 1.1664836 1.192164826 1.219355889 1.33430066 1 16.73708133 -11.57498277 2.497499858 0.703673123 1.219602363 0.400734089 0.082150811 6932085.982 1896854.285 11753392.29 0.020214446 2.66E-12 11.57498277 0.515929241 DWYPHSR ddPTM_A459_MK2206_30min_R1 1 DWYPHSR 7 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 0 96.492 0.032471 7663300 6056.6 5903.1 5904.2 4799.7 6177.2 6386.4 6957.9 5524.4 5775.5 5969.9 FALSE TRUE 5541.454366 5518.807117 5503.439354 5169.373726 5931.149044 6747.992449 6493.751186 5476.100753 6375.883893 6709.496282 0.82591213 0.822536728 0.820246278 0.770456307 0.883993193 1.005737564 0.967844815 0.816171665 0.95027758 1 12.71198874 -6.500506722 6.386566602 0.9387246 0.812839378 0.614009742 0.051365455 0.132840846 20.73528373 0.017083155 0.01858999 3.16E-07 6.500506722 -0.125885222 DYAAQT(ph)SPSPK ddPTM_A459_MK2206_30min_R1 1 DYAAQTSPSPK 11 0 P06576;F8W0P7 P06576 ATP5B "ATP synthase subunit beta, mitochondrial" 1 DYAAQT(0.753)S(0.24)PS(0.007)PK 155.47 0.0012505 4797200 7295.6 6334 3917.3 2577.7 2336.4 1888 2655.6 2137.6 2382.5 2039.9 TRUE FALSE 6675.070909 5921.655449 3651.40459 2776.234901 2243.336241 1994.896928 2478.449769 2118.911189 2630.169401 2292.618212 2.911549282 2.582922624 1.592678873 1.210945148 0.978504065 0.870139179 1.081056478 0.924232032 1.14723393 1 11.16278041 -5.311749169 1.513208839 0.995985429 3.037059736 0.986435554 0.080339776 0.050686671 0.194425504 0.024188609 0.113806992 4.88E-06 5.311749169 2.041074308 up DYAAQTS(ph)PSPK ddPTM_A459_MK2206_30min_R1 1 DYAAQTSPSPK 11 0 P06576;F8W0P7 P06576 ATP5B "ATP synthase subunit beta, mitochondrial" 1 DYAAQT(0.106)S(0.691)PS(0.203)PK 130.69 0.0023466 5601200 6391.3 5154.6 3561.9 2267.8 1991.1 2015.7 2030 2116.7 2475.1 1980.9 TRUE FALSE 5847.686373 4819.034603 3320.128152 2442.466349 1911.790271 2129.827192 1894.582404 2098.193915 2732.395502 2226.308847 2.626628547 2.16458494 1.491315168 1.097092325 0.85872644 0.956662951 0.850997114 0.942454106 1.227320956 1 11.12043803 -5.237302043 1.381036833 0.957360749 2.75840706 0.968361444 0.102456527 0.099432298 0.288579082 0.032607554 0.197491213 5.79E-06 5.237302043 1.80104631 up DYAAQTS(ph)PSPK ddPTM_A459_MK2206_30min_R2 1 DYAAQTSPSPK 11 0 P06576;F8W0P7 P06576 ATP5B "ATP synthase subunit beta, mitochondrial" 1 DYAAQT(0.062)S(0.727)PS(0.212)PK 145.81 0.0030622 0 107690 43797 22846 17101 20417 14940 22157 15114 15994 18895 TRUE FALSE 115934.8292 41622.10467 23607.67424 15703.7936 19615.32599 15508.55217 19247.75928 17089.45169 17385.12921 18278.4577 6.34270304 2.277112509 1.291557232 0.859142158 1.07313901 0.848460654 1.053029725 0.93495042 0.951126703 1 14.15785672 -4.591382738 1.722742527 0.96844086 10.48483881 0.994862169 0.115402152 0.105336957 0.210801444 0.033573041 1.930159951 2.56E-05 4.591382738 9.516397955 up DYAFIHFDER ddPTM_A459_MK2206_30min_R1 4 DYAFIHFDER 10 0 O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 ;;; 117.14 0.0085957 38548900 28530.7 28840.4 27145.5 23029.1 27958.6 27549 30432.6 22004.8 26198 25244.6 FALSE TRUE 26104.01414 26962.88472 25302.93909 24802.80527 26844.94976 29108.80057 28402.49678 21812.41435 28921.37585 28372.09164 0.92005956 0.950331229 0.891824946 0.874197278 0.946174505 1.025965972 1.001071657 0.768798248 1.019360018 1 14.79218489 -6.497125641 23.70030671 0.954866551 0.910735423 0.107186893 0.071662611 1138.484357 1047735.253 0.022907524 0.025860415 3.18E-07 6.497125641 -0.044131128 DYAFIHFDER ddPTM_A459_MK2206_30min_R2 2 DYAFIHFDER 10 0 O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 ; 136.49 0.0025994 2565000 41928 41932 36090 41032 37825 40566 43257 32176 29265 37100 FALSE TRUE 45138.03992 39849.71785 37293.22259 37679.55435 36339.80044 42109.76756 37577.30394 36381.51368 31810.4168 35889.43004 1.257697318 1.110346913 1.039114373 1.049878873 1.012548831 1.173319485 1.047029833 1.013711102 0.886344998 1 15.13127139 -1.522878791 0.834540783 1.027474538 74.61994579 0.539134963 0.065576049 518.2771374 1.543701081 0.023959596 72327.94958 0.029999997 1.522878791 73.59247125 DYAFVHFEDR ddPTM_A459_MK2206_30min_R1 2 DYAFVHFEDR 10 0 O43390;B4DT28;O43390-4;O43390-3;O43390-2;A0A286YEZ8 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R 0 ; 127.51 0.0046003 31062000 22961 23671 22742 20297.4 23608 21811 22400 18307.9 19722.4 17025.9 FALSE TRUE 21008.04638 22130.0136 21198.3364 21860.70926 22667.64337 23045.91997 20905.73687 18147.83596 21772.61406 19135.19703 1.097874579 1.156508269 1.107819082 1.142434501 1.184604649 1.204373278 1.092527913 0.948400789 1.13783067 1 14.22394114 -7.524747488 24.99777352 1.029962286 1.148712952 0.510506386 0.052847824 49.01252172 655594.2044 0.023681092 0.013797035 2.99E-08 7.524747488 0.118750666 DYAFVHFEDR ddPTM_A459_MK2206_30min_R2 3 DYAFVHFEDR 10 0 O43390;B4DT28;O43390-4;O43390-3;O43390-2;A0A286YEZ8 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R 0 ;; 144.55 0.0013605 13570800 109898 127726 101038 132686 115732 134116 132942 109949 102704 113383 FALSE TRUE 118311.8754 121383.3126 104406.5565 121845.1294 111187.7802 139219.8784 115486.5557 124319.7118 111637.0083 109683.322 1.078667871 1.106670644 0.951890904 1.1108811 1.01371638 1.269289404 1.052908989 1.133442255 1.017812063 1 16.74298465 -9.256920278 16.2570371 1.000008495 1.083665838 0.083246611 0.081098048 0 0 0.076295278 0.018504323 5.53E-10 9.256920278 0.083657343 DYAFVHMER ddPTM_A459_MK2206_30min_R1 2 DYAFVHMER 9 0 D6R9K7;J3QRR5;E9PB51;Q9BWF3-3;Q9BWF3-4;Q9BWF3-2;Q9BWF3;E9PLB0;E9PM61;U3KQD5;Q9BQ04 D6R9K7;E9PLB0 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B 0 ; 93.096 0.035155 4528900 8740.7 8305.1 8572 7397.1 8047.3 8333 9124.8 7070.5 7983.6 7410.6 FALSE TRUE 7997.257566 7764.43648 7990.156523 7966.825924 7726.759001 8804.807259 8516.101241 7008.683364 8813.52379 8328.681075 0.960206964 0.932252827 0.959354362 0.956553127 0.927729004 1.057167057 1.022502983 0.841511795 1.058213625 1 13.02387233 DYDDMS(ph)PR ddPTM_A459_MK2206_30min_R1 6 DYDDMSPR 8 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR 153.1 0.00090703 1654919600 40015.5 40610.4 42203.6 35724.2 39866.5 34857.6 40776.1 38732.4 35406.9 34514.4 TRUE FALSE 36611.9716 37966.65558 39338.93722 38475.68407 38278.53289 36831.20719 38056.00077 38393.76671 39087.57396 38790.30444 0.943843368 0.978766631 1.014143554 0.991889201 0.986806715 0.949495182 0.981069917 0.989777401 1.0076635 1 15.24340848 -8.014695984 3.100253007 1.003495346 0.979275107 0.225776473 0.019006664 0.455097001 8.615420641 0.015184002 0.005494753 9.67E-09 8.014695984 -0.024220238 DYDDMS(ph)PR ddPTM_A459_MK2206_30min_R2 5 DYDDMSPR 8 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR 150.81 0.0012315 6965765300 8932395 9951505 8751839 10590475 10039312 9431832 9830550 8022688 8224560 9562472 TRUE FALSE 9616266.029 9457327.733 9043620.944 9725199.315 9645118.167 9790766.976 8539786.976 9071280.868 8939917.362 9250449.322 1.039545831 1.022364147 0.977641261 1.051321831 1.04266483 1.058409882 0.92317537 0.980631378 0.966430608 1 23.14109201 -7.253318016 24.99717657 0.965945287 1.030447064 0.569649458 0.027401517 453.4400934 1395671.118 0.010834374 0.008243844 5.58E-08 7.253318016 0.064501778 DYDDMSPR ddPTM_A459_MK2206_30min_R1 2 DYDDMSPR 8 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 150.05 0.018541 80647000 14807.2 15762.1 15465.1 13230.7 16642.7 14441.6 15441.4 15113.5 13808.3 12154.1 FALSE TRUE 13547.76988 14735.98443 14415.3721 14249.73081 15979.78602 15259.27091 14411.33238 14981.36426 15243.7222 13659.84167 0.991795528 1.078781496 1.055310336 1.043184186 1.169836841 1.117089882 1.055014599 1.096745089 1.115951603 1 13.73765314 -3.372473085 0.894918602 1.090939109 3.48E-09 0.249552946 0.045186443 31.09218576 2.577133927 0.015100633 57.65197322 0.000424157 3.372473085 -1.090939106 DYDDMSPR ddPTM_A459_MK2206_30min_R2 2 DYDDMSPR 8 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 139.97 0.03284 124362000 204772 278730 263200 281720 286130 277410 284310 226110 232710 275450 FALSE TRUE 220449.5018 264888.6735 271974.9566 258702.5748 274895.0985 287967.0319 246979.7555 255663.3534 252950.6952 266462.0891 0.827320324 0.994095162 1.020689125 0.970879481 1.031648065 1.08070545 0.926885158 0.959473651 0.949293372 1 18.02357076 -4.761309987 24.94195674 0.993477802 0.827320143 0.578666904 0.042311723 2.29479533 440637.0477 0.011182101 0.062864814 1.73E-05 4.761309987 -0.166157659 DYDEEEQGYDS(ph)EK ddPTM_A459_MK2206_30min_R2 2 DYDEEEQGYDSEK 13 0 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 DYDEEEQGY(0.001)DS(0.999)EK;DYDEEEQGYDS(1)EK 196.97 0.00017888 70403000 108565 66086 82303 60305 56885 35846 81762 62532 34467 95707 TRUE FALSE 116876.8199 62804.26534 85046.94094 55377.88859 54651.40908 37210.14465 71026.55119 70705.1471 37464.87736 92584.08843 1.262385598 0.678348369 0.91859133 0.598136133 0.590289433 0.401906475 0.767157212 0.763685729 0.404657841 1 16.49847665 -2.146741171 1.062357431 0.645130816 199.9999814 0.454481426 0.18783481 472.9660579 2.147480947 0.055943849 227745.2228 0.00713278 2.146741171 199.3548506 DYEESSWDSES(ph)LCETVSQK ddPTM_A459_MK2206_30min_R2 1 DYEESSWDSESLCETVSQK 19 0 R4GNA2;Q5W026;Q9BXX3 R4GNA2 ANKRD30A Ankyrin repeat domain-containing protein 30A 1 DYEESSWDSES(0.757)LCET(0.121)VS(0.121)QK 71.894 0.0090242 14428000 84992 50646 72903 64717 51726 45554 71059 52582 44521 78718 TRUE FALSE 91499.05287 48130.99329 75333.54963 59429.41408 49694.97734 47287.58939 61728.86794 59454.64794 48393.3561 76149.43811 1.201572266 0.63205973 0.989285693 0.78043142 0.652598083 0.620984088 0.810628016 0.780762792 0.635505098 1 16.21654577 -4.751000298 24.99709868 0.760670466 1.201573183 0.490530394 0.132752621 372.0323265 890797.8382 0.032178887 0.445921269 1.77E-05 4.751000298 0.440902717 DYEEVGADSADGEDEGEEY ddPTM_A459_MK2206_30min_R1 2 DYEEVGADSADGEDEGEEY 19 0 Q9BQE3;F5H5D3 Q9BQE3 TUBA1C Tubulin alpha-1C chain 0 ; 202.03 1.28E-22 7015700 2580.1 2696.4 2308.91 2022.82 2149.16 2244.62 2456.3 2649.6 2148.35 2596.9 FALSE TRUE 2360.648946 2520.86387 2152.187622 2178.617947 2063.554406 2371.708445 2292.444709 2626.434827 2371.67867 2918.623578 0.808822681 0.863716681 0.737398148 0.746453898 0.707029993 0.812611966 0.78545405 0.899888169 0.812601765 1 11.51107244 -8.769769029 0.661648661 0.999597024 0.775983319 0.612109578 0.050997155 0.769475521 0.694985751 0.056804421 0.021454532 1.70E-09 8.769769029 -0.223613705 DYEEVGADSADGEDEGEEY ddPTM_A459_MK2206_30min_R2 2 DYEEVGADSADGEDEGEEY 19 0 Q9BQE3;F5H5D3 Q9BQE3 TUBA1C Tubulin alpha-1C chain 0 ; 229.16 1.92E-22 18278100 156674 145669 148239 159549 163001 147187 151680 120431 131219 160750 FALSE TRUE 168669.0819 138435.2893 153181.2143 146513.3363 156600.7617 152788.3044 131764.2338 136171.7452 142632.1914 155504.7407 1.084655562 0.890231955 0.985058164 0.942179227 1.007048152 0.982531489 0.847332584 0.875675845 0.917220857 1 17.24659904 -7.236016957 24.06531312 0.899696973 0.977255974 0.25281927 0.059161929 596.5309946 564687.2354 0.021455938 0.016611501 5.81E-08 7.236016957 0.077559001 DYEEVGVDSVEGEGEEEGEEY ddPTM_A459_MK2206_30min_R2 3 DYEEVGVDSVEGEGEEEGEEY 21 0 P68363;P68363-2 P68363 TUBA1B Tubulin alpha-1B chain 0 ;; 147.24 3.99E-05 37451000 257140 264047 246126 289870 258342 265571 290642 223646 224288 295784 FALSE TRUE 276826.8361 250934.8099 254331.718 266186.6938 248198.195 275677.4905 252480.3563 252877.3001 243796.1648 286132.5923 0.967477469 0.87698786 0.888859658 0.930291414 0.867423711 0.96346064 0.882389364 0.883776637 0.852039129 1 18.12632431 -4.74755635 24.59569119 0.90162146 0.967477672 0.149277752 0.04405709 1034.091314 1831904.415 0.010225066 0.201318736 1.79E-05 4.74755635 0.065856212 DYEHQFHLR ddPTM_A459_MK2206_30min_R1 1 DYEHQFHLR 9 0 Q15276-2;Q15276;A0A087WZZ3 Q15276-2 RABEP1 Rab GTPase-binding effector protein 1 0 134.26 0.00165 3857900 2256.3 2124.6 2304.9 1629.6 2354.7 2184.5 2307.9 1827.7 2415.5 1643.7 FALSE TRUE 2064.389837 1986.288154 2148.44981 1755.112074 2260.907313 2308.184502 2153.944202 1811.720612 2666.599869 1847.333965 1.117496823 1.07521877 1.163000221 0.950078387 1.223875788 1.249467906 1.165974449 0.980721757 1.443485541 1 10.85122899 -6.314163233 24.99700748 1.179337023 1.082542147 0.122307269 0.131818244 737.8247475 349809.474 0.039073067 0.044304746 4.85E-07 6.314163233 -0.096794876 DYEHQFHLR ddPTM_A459_MK2206_30min_R2 1 DYEHQFHLR 9 0 Q15276-2;Q15276;A0A087WZZ3 Q15276-2 RABEP1 Rab GTPase-binding effector protein 1 0 101.65 0.0094969 2541300 9539.7 11077 9788.5 11217 11256 9079.3 11386 9762.4 8759.2 9518.3 FALSE TRUE 10270.06677 10526.93229 10114.8437 10300.53522 10814.03288 9424.819124 9891.004523 11038.3792 9521.059383 9207.718651 1.115375823 1.143272583 1.098517894 1.118684835 1.17445301 1.023578096 1.074207944 1.198818037 1.034030224 1 13.16862804 -6.754712231 24.99717144 1.079058055 1.12841042 0.242789293 0.054056036 301.5635779 1120570.134 0.018042677 0.017663459 1.76E-07 6.754712231 0.049352365 DYEIESQNPLAS(ph)PTNTLLGSAK ddPTM_A459_MK2206_30min_R1 2 DYEIESQNPLASPTNTLLGSAK 22 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 DYEIESQNPLAS(0.999)PT(0.001)NTLLGSAK;DYEIESQNPLAS(0.998)PT(0.002)NTLLGSAK 180.82 1.69E-16 215250000 18362.5 17911.5 18651.8 16313.1 16380.5 14501.3 15415.6 15180.3 14263.4 13638.1 TRUE FALSE 16800.67295 16745.45809 17385.76778 17569.53779 15728.03 15322.35107 14387.25345 15047.58024 15746.13147 15327.69079 1.096099418 1.092497123 1.134271824 1.146261236 1.02611869 0.999651629 0.938644552 0.981725195 1.027299656 1 13.90385274 -6.446181524 3.476153716 0.986374841 1.116370255 0.843382114 0.025996683 0.097293947 2.262046489 0.009242962 0.010308376 3.58E-07 6.446181524 0.129995414 DYEIESQNPLAS(ph)PTNTLLGSAK ddPTM_A459_MK2206_30min_R2 5 DYEIESQNPLASPTNTLLGSAK 22 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 DYEIESQNPLAS(0.922)PT(0.075)NT(0.003)LLGSAK;DYEIESQNPLAS(0.452)PT(0.426)NT(0.122)LLGSAK;DYEIESQNPLAS(0.992)PT(0.007)NT(0.001)LLGSAK;DYEIESQNPLAS(0.998)PT(0.002)NTLLGSAK;DYEIES(0.001)QNPLAS(0.67)PT(0.292)NT(0.035)LLGS(0.002)AK 146.63 2.78E-07 127263700 786915 819310 820316.2 875116 868628 718707.6 892247 697144.5 691196.7 807381 TRUE FALSE 847161.8174 778624.2568 847665.1327 803616.2234 834521.3002 746058.5213 775093.8971 788263.6798 751315.7396 781036.2241 1.084663926 0.996911837 1.085308346 1.02891031 1.068479636 0.955216286 0.99239174 1.009253675 0.961947367 1 19.57502994 -6.755313192 24.99993225 0.984879537 1.050219597 0.588052575 0.028864899 106.0359652 432713.9197 0.009051112 0.008834209 1.76E-07 6.755313192 0.065340059 DYEPPS(ph)PSPAPGAPPPPPQR ddPTM_A459_MK2206_30min_R2 1 DYEPPSPSPAPGAPPPPPQR 20 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-1;H0Y8L4 A8MQ02 MLLT4 Afadin 1 DY(0.007)EPPS(0.947)PS(0.047)PAPGAPPPPPQR 201.18 3.19E-24 0 17055 20214 16595 19851 15241 17209 15664 11407 14908 15301 TRUE FALSE 18360.74391 19210.20215 17148.26902 18229.1098 14642.56176 17863.90055 13607.29798 12897.93407 16204.67089 14801.72962 1.240445838 1.297834959 1.158531432 1.231552681 0.989246671 1.206879264 0.91930459 0.871380196 1.094782252 1 13.85347815 -6.363559636 0.789540505 0.970001177 1.271575793 0.574349068 0.091854606 0.471449323 0.644297101 0.052454841 0.079608109 4.33E-07 6.363559636 0.301574616 DYEPPSPS(ph)PAPGAPPPPPQR ddPTM_A459_MK2206_30min_R2 1 DYEPPSPSPAPGAPPPPPQR 20 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-1;H0Y8L4 A8MQ02 MLLT4 Afadin 1 DYEPPS(0.185)PS(0.815)PAPGAPPPPPQR 132.87 0.00013923 4922600 11854 14669 10519 17274 12727 10467 12031 8713.1 10165 12259 TRUE FALSE 12761.55135 13940.55879 10869.69821 15862.65894 12227.27403 10865.32902 10451.31525 9851.932087 11049.13333 11858.98983 1.076107791 1.175526667 0.916578761 1.337606252 1.031055276 0.916210333 0.881298947 0.830756432 0.931709486 1 13.5336935 -6.642918048 3.877801705 0.899113733 1.121705321 0.474391082 0.105555785 0.188404322 5.294184699 0.034884445 0.03464882 2.28E-07 6.642918048 0.222591588 DYFEEYGK ddPTM_A459_MK2206_30min_R2 2 DYFEEYGK 8 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 145.63 0.02721 96050000 280491 273379 269281 264556 237853 201250 289901 244920 196260 292813 FALSE TRUE 301965.6066 259803.3964 278258.6941 242940.9285 228513.6961 208908.7098 251836.6505 276931.8849 213330.34 283258.5358 1.06604239 0.917195295 0.98234884 0.857664987 0.806731898 0.737519557 0.889069944 0.977664748 0.753129432 1 18.11175991 -4.892987921 1.008211058 0.855965245 1.120866871 0.318674985 0.086273391 1.987790877 1.84136098 0.029122561 0.549266802 1.28E-05 4.892987921 0.264901626 DYFEEYGKIDTIEIITDR ddPTM_A459_MK2206_30min_R1 1 DYFEEYGKIDTIEIITDR 18 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 134.93 0.0010255 1338200 334.19 382.94 343.09 292.29 505.61 280.28 548.01 386.8 269.88 67.322 FALSE TRUE 305.7653856 358.0105364 319.8020067 314.8022264 485.4704831 296.1492114 511.4532528 383.4182484 297.9349918 75.66235762 4.041182369 4.73168624 4.22669894 4.160618785 6.416274861 3.914089129 6.759679039 5.067490103 3.937691095 1 6.241503826 -2.345145299 4.302170184 4.64008811 4.36824312 0 1.51224055 0 0 0.321087917 0 0.004517048 2.345145299 -0.27184499 DYFEQYGK ddPTM_A459_MK2206_30min_R1 1 DYFEQYGK 8 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8VZ49;Q32P51;A0A2R8Y4L2;F8VYN5 F8W6I7 HNRNPA1;HNRNPA1L2 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2" 0 133.58 0.041889 36292000 3864.9 3299.4 3577.7 3378.7 3756.2 3580.4 3142 3461.6 3205 2925.6 FALSE TRUE 3536.16996 3084.60846 3334.855692 3638.928059 3606.5826 3783.119154 2932.402913 3431.335596 3538.171219 3288.045415 1.075462627 0.938128301 1.014236506 1.106714659 1.096877368 1.150567792 0.891837716 1.043579137 1.076071274 1 11.68301451 -5.539840451 24.72026978 1.05387528 0.999142186 0.066171639 0.073003778 500.5074866 729444.4699 0.02035673 0.035270871 2.89E-06 5.539840451 -0.054733094 DYFGAHTYELLAK ddPTM_A459_MK2206_30min_R1 2 DYFGAHTYELLAK 13 0 P52209-2;P52209 P52209-2 PGD "6-phosphogluconate dehydrogenase, decarboxylating" 0 ; 119.39 0.0045505 44565000 14405.3 14498.1 13733.3 11154.8 13229.1 14154.2 15769.1 12342.1 13915.2 15692 FALSE TRUE 13180.05359 13554.27105 12801.12186 12013.94463 12702.15693 14955.59857 14717.17211 12234.19432 15361.73484 17636.04343 0.747336195 0.768555096 0.725849985 0.681215414 0.72023847 0.848013254 0.834493982 0.693704026 0.871042017 1 14.10623931 -9.855533261 0.322656083 1.078999805 0.727118878 0.661182104 0.054719582 4.825089657 0.589499332 0.486382632 0.059074397 1.39E-10 9.855533261 -0.351880927 DYFGAHTYELLAK ddPTM_A459_MK2206_30min_R2 2 DYFGAHTYELLAK 13 0 P52209-2;P52209 P52209-2 PGD "6-phosphogluconate dehydrogenase, decarboxylating" 0 ; 136.38 0.0015418 11248900 150472 128300 124835 131687 122338 111171 146981 121023 93768 152579 FALSE TRUE 161992.252 121928.8086 128996.9366 120927.7509 117534.3954 115401.6903 127682.2181 136841.1216 101923.7711 147600.3597 1.097505808 0.826073926 0.873960855 0.819291708 0.796301551 0.781852365 0.86505357 0.927105611 0.690538772 1 17.17133671 -4.759893428 24.99716832 0.837628134 1.097506128 0.479827177 0.079603327 32.14438745 519586.9447 0.018425627 0.113474697 1.74E-05 4.759893428 0.259877993 DYGHSSSRDDYPSR ddPTM_A459_MK2206_30min_R1 4 DYGHSSSRDDYPSR 14 1 H3BT71;H0Y6E7;P38159;P38159-2;H3BUY5;Q96E39 H3BT71;P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 0 ;;; 112.02 0.002983 52682100 17703.2 12330.6 14855.1 15352.7 26538.6 21424.3 16328.3 18912.8 6765.1 3427 FALSE TRUE 16197.44988 11527.8757 13846.7772 16535.16761 25481.51137 22637.32535 15239.0689 18747.44738 7468.356354 3851.562633 4.205422947 2.993038618 3.59510633 4.293106251 6.615889133 5.87743924 3.956593818 4.867491242 1.939045802 1 11.91122817 -5.773749804 5.633929278 4.419551289 3.530421974 0 1.611300645 0.546427229 55.2358268 0.451949576 0.721173659 1.68E-06 5.773749804 -0.889129315 DYGNSPLHR ddPTM_A459_MK2206_30min_R1 1 DYGNSPLHR 9 0 A0A0U1RRM4;A0A087WUW5;A0A0D9SF20;K7ELW5;A6NLN1;P26599;P26599-2;P26599-3 A0A0U1RRM4;A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 0 109.29 0.016181 15085000 3743.4 1874.1 2600.1 1614.7 4972.9 4869.6 4818.3 3216.7 2005.8 1916.4 FALSE TRUE 3425.004173 1752.095749 2423.612456 1739.064474 4774.818863 5145.312544 4496.879998 3188.576731 2214.310088 2153.8181 1.590201221 0.813483622 1.125263297 0.807433308 2.216909061 2.388926225 2.087864337 1.480429908 1.028085932 1 11.0726807 -6.252519546 24.99130617 1.778193348 1.067706511 0.273063861 0.48238538 817.2818398 2289833.404 0.150423246 0.191284175 5.59E-07 6.252519546 -0.710486837 DYGNSPLHR ddPTM_A459_MK2206_30min_R2 2 DYGNSPLHR 9 0 A0A0U1RRM4;A0A087WUW5;A0A0D9SF20;K7ELW5;A6NLN1;P26599;P26599-2;P26599-3 A0A0U1RRM4;A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 0 ; 136.57 0.0036935 24882000 45017 106900 71476 139281 157444 188710 145775 89223 135262 72628 FALSE TRUE 48463.53613 101591.5014 73858.97417 127901.2968 151261.9575 195891.4913 126634.5674 100884.7524 147026.8443 70258.15431 0.689792332 1.445974527 1.051251273 1.820447719 2.15294522 2.788167341 1.802418077 1.435915211 2.092665908 1 16.10037806 -5.808440565 4.809213331 1.9445279 1.096263957 0.373817644 0.473615826 0.204422929 10.23816691 0.136223759 0.21319937 1.55E-06 5.808440565 -0.848263943 DYHFKVDNDENEHQLSLR ddPTM_A459_MK2206_30min_R1 1 DYHFKVDNDENEHQLSLR 18 1 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 0 98.227 0.0013825 5009200 1270 1479.9 1181.9 1239.6 1357.3 1020 1077.2 1096.7 593.61 755.26 FALSE TRUE 1161.979831 1383.558241 1101.675921 1335.074207 1303.235867 1077.751519 1005.341953 1087.111668 655.3178838 848.8273107 1.36892371 1.629964333 1.297879919 1.572845489 1.535336871 1.269694677 1.184389264 1.280721831 0.772027332 1 9.729327265 -7.619669863 0.960413303 0.923078308 1.482717455 0.697648127 0.137586409 0.308122659 0.519233332 0.113156853 0.050431222 2.40E-08 7.619669863 0.559639147 DYIPVDQEELR ddPTM_A459_MK2206_30min_R2 2 DYIPVDQEELR 11 0 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ; 146.71 0.0094095 8195100 43278 55705 46877 61076 53018 54196 61016 42452 54203 54749 FALSE TRUE 46591.39696 52938.7707 48439.85578 56085.89543 50936.24693 56258.46676 53004.52591 48000.62216 58917.47896 52962.54461 0.879704653 0.999551118 0.9146059 1.058972824 0.96174093 1.062231189 1.00079266 0.906312612 1.112436712 1 15.69268482 -3.372818123 0.774916313 1.007533497 4.28E-11 0.2693218 0.06099875 27.42512299 2.24081997 0.02119366 38.89066993 0.00042382 3.372818123 -1.007533497 DYIVVGS(ph)DSGR ddPTM_A459_MK2206_30min_R1 1 DYIVVGSDSGR 11 0 Q15393;J3QRB2;J3QL37;Q15393-2 Q15393 SF3B3 Splicing factor 3B subunit 3 1 DYIVVGS(0.5)DS(0.5)GR 78.516 0.047433 11995000 2320.6 2557.3 2136.7 2208.1 2453.3 2466.8 2498 2229.4 1834.9 1694.8 TRUE FALSE 2123.220784 2390.819305 1991.666757 2378.168245 2355.579866 2606.468084 2331.362978 2209.908591 2025.644421 1904.764619 1.114689323 1.255178347 1.045623557 1.248536549 1.236677667 1.368393794 1.223963819 1.160200357 1.063461806 1 10.89539701 -10.00443166 6.991337051 1.000000408 1.196727934 0.27249776 0.093040054 0 0 0.093248685 0.022616128 9.90E-11 10.00443166 0.196727526 DYLHLPPEIVPATLR ddPTM_A459_MK2206_30min_R1 1 DYLHLPPEIVPATLR 15 0 P46783;A0A2R8Y6L3;F6U211;A0A2R8Y7H1;S4R435;A0A2R8YFH6;A0A1W2PQS6 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 0 82.651 0.035097 7712800 2195.2 2203.8 2539.7 1928.5 2205 2086.4 2024 1942.4 1865.4 1943 FALSE TRUE 2008.486713 2060.332219 2367.31224 2077.033404 2117.170181 2204.530165 1888.982653 1925.417802 2059.315005 2183.713509 0.919757424 0.943499324 1.084076382 0.95114739 0.969527446 1.009532686 0.86503227 0.881717219 0.943033506 1 11.09256788 -7.251528833 24.97939226 0.912588849 0.98094875 0.201898652 0.054221795 934.321831 2354948.505 0.020961184 0.01603823 5.60E-08 7.251528833 0.068359901 DYLHYIR ddPTM_A459_MK2206_30min_R1 2 DYLHYIR 7 0 P62280;M0R1H5;M0QZC5 P62280 RPS11 40S ribosomal protein S11 0 ; 119.56 0.014134 52909000 19968.9 19785.6 21122 16980.6 20820 21319 23201 20604.1 17995.8 16635.5 FALSE TRUE 18270.44019 18497.55384 19688.29749 18288.44875 19990.69531 22526.06336 21653.30362 20423.96053 19866.52781 18696.43133 0.977215377 0.98936281 1.053051095 0.978178586 1.069225188 1.204832246 1.158151694 1.092398874 1.062583948 1 14.1904753 -6.491248742 6.538098916 1.115432624 1.004589276 0.433931692 0.055244543 0.177161749 25.17305914 0.017773969 0.019592791 3.23E-07 6.491248742 -0.110843348 DYLHYIR ddPTM_A459_MK2206_30min_R2 1 DYLHYIR 7 0 P62280;M0R1H5;M0QZC5 P62280 RPS11 40S ribosomal protein S11 0 92.467 0.037914 12875000 100180 108200 113330 120250 111670 112240 130100 105430 104700 113320 FALSE TRUE 107849.8578 102826.9453 117108.3656 110425.1903 107285.2747 116511.3719 113017.7137 119210.063 113806.6167 109622.3777 0.983830675 0.938010537 1.068288867 1.007323438 0.978680421 1.062842955 1.030973019 1.087461023 1.03816957 1 16.74218281 -6.763997077 24.99943367 1.048548363 0.996779146 0.29793971 0.036967402 85.3462318 834183.8988 0.012869191 0.011882137 1.72E-07 6.763997077 -0.051769217 DYLLCDYNR ddPTM_A459_MK2206_30min_R2 1 DYLLCDYNR 9 0 A0A6I8PRV6;B1AK87;B1AK85;B1AK88;P47756-2;P47756 A0A6I8PRV6 CAPZB F-actin-capping protein subunit beta 0 134.77 0.038838 10850000 29961 44943 41317 44206 41341 38546 42882 35020 28861 38079 FALSE TRUE 32254.8372 42711.19597 42694.48816 40594.22839 39717.74462 40012.89504 37251.54189 39597.23424 31371.27761 36836.48535 0.875622006 1.159480759 1.159027192 1.102011443 1.07821754 1.086229988 1.011267539 1.074946045 0.851636016 1 15.1688478 -8.241426277 23.61555968 0.925818035 1.074554753 0.31554944 0.083568666 382.8126105 451723.237 0.055392956 0.020862854 5.74E-09 8.241426277 0.148736718 DYLLS(ph)ESEDEGDNDGERK ddPTM_A459_MK2206_30min_R1 2 DYLLSESEDEGDNDGERK 18 1 Q9BVJ6-3;Q9BVJ6 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 DYLLS(0.689)ES(0.311)EDEGDNDGERK;DYLLS(0.976)ES(0.024)EDEGDNDGERK 145.19 0.00014154 10124500 2465.64 2952.7 3281.9 2616.9 2414.3 2201.26 2811.1 2433.26 2646.5 2432.97 TRUE FALSE 2255.92437 2760.478693 3059.133772 2818.454091 2318.133319 2325.893439 2623.576648 2411.986264 2921.613146 2734.384692 0.825020846 1.009542915 1.118764957 1.030745272 0.847771466 0.850609443 0.959476059 0.882094707 1.068471878 1 11.41700051 -4.751155899 24.85687035 0.968496624 0.825020527 0.20795682 0.086687023 759.5191254 1835749.85 0.02360642 0.319305025 1.77E-05 4.751155899 -0.143476097 DYLLS(ph)ESEDEGDNDGERK ddPTM_A459_MK2206_30min_R2 1 DYLLSESEDEGDNDGERK 18 1 Q9BVJ6-3;Q9BVJ6 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 DYLLS(0.5)ES(0.5)EDEGDNDGERK 125.92 0.00041179 3330800 5757.3 11724 12027 9909.3 11223 9358.5 13427 10906 11508 10145 TRUE FALSE 6198.083315 11141.80321 12427.97418 9099.678492 10782.32863 9714.644275 11664.01877 12331.45165 12508.94504 9813.969481 0.631557223 1.135300373 1.266355495 0.927216914 1.098671506 0.989879202 1.188511824 1.256520277 1.274606067 1 13.26062107 -7.291406678 8.707570501 1.201622752 1.026120387 0.187183382 0.170537997 0.606507515 165.5139486 0.070582371 0.048083222 5.11E-08 7.291406678 -0.175502365 DYLLSES(ph)EDEGDNDGERK ddPTM_A459_MK2206_30min_R2 1 DYLLSESEDEGDNDGERK 18 1 Q9BVJ6-3;Q9BVJ6 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 DYLLS(0.122)ES(0.878)EDEGDNDGERK 116.69 0.00053152 3797800 11459 14493 12777 12200 13903 10828 13472 14706 15329 13873 TRUE FALSE 12336.30985 13773.29869 13202.9788 11203.22097 13357.09836 11240.06713 11703.11022 16628.12469 16662.28871 13420.32515 0.919225855 1.026301416 0.983804689 0.834795048 0.995288729 0.837540596 0.872043717 1.239025472 1.241571164 1 13.712132 -7.760822182 24.99999988 1.180223774 0.926335781 0.600536364 0.08775796 10.30744872 417573.703 0.043847067 0.023350067 1.73E-08 7.760822182 -0.253887993 DYLSSS(ph)FLCSDDDR ddPTM_A459_MK2206_30min_R1 2 DYLSSSFLCSDDDR 14 0 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 DYLSS(0.151)S(0.847)FLCS(0.002)DDDR;DYLSS(0.001)S(0.998)FLCS(0.001)DDDR 239.61 1.72E-19 5674900 1926.08 1757.08 1800.82 1474.99 2008.26 1658.18 1863.61 1737.75 1529.96 1518.46 TRUE FALSE 1762.256782 1642.693773 1678.585356 1588.593985 1928.266752 1752.064719 1739.291977 1722.557035 1689.004817 1706.578289 1.032625807 0.962565728 0.983597042 0.930864992 1.129902311 1.026653585 1.01916917 1.009363032 0.989702511 1 10.73689088 -4.435561813 21.5282493 1.007358722 2.948403277 0.025118198 0.049316265 1905.161293 490447.4442 0.012322763 7982.001017 3.67E-05 4.435561813 1.941044555 DYNASASTIS(ph)PPSSMEEDKFSR ddPTM_A459_MK2206_30min_R1 5 DYNASASTISPPSSMEEDKFSR 22 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DYNASAS(0.002)T(0.009)IS(0.972)PPS(0.012)S(0.005)MEEDKFSR;DYNASAS(0.002)T(0.102)IS(0.896)PPSSMEEDKFSR;DYNASAS(0.002)T(0.005)IS(0.988)PPS(0.004)SMEEDKFSR;DYNAS(0.001)AS(0.01)T(0.029)IS(0.96)PPSSMEEDKFSR;DYNASASTIS(0.953)PPS(0.034)S(0.013)MEEDKFSR 150.73 1.22E-07 377172800 13330.75 14101.9 13406.31 10019.93 10906.44 12021.35 13658 10717.27 16142.6 18138 TRUE FALSE 12196.89971 13183.86375 12496.32703 10791.66674 10472.0134 12701.98845 12746.89974 10623.57004 17820.68104 20385.07237 0.598325063 0.646741081 0.613013621 0.529390651 0.513709896 0.623102445 0.625305592 0.521144583 0.87420249 1 14.31522546 -8.409898815 3.798535656 0.995609028 0.585814329 0.904310183 0.046675397 0.063064167 1.529043134 0.047714839 0.012598658 3.89E-09 8.409898815 -0.4097947 DYNASASTIS(ph)PPSSMEEDKFSR ddPTM_A459_MK2206_30min_R2 2 DYNASASTISPPSSMEEDKFSR 22 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DYNAS(0.005)AS(0.033)T(0.023)IS(0.698)PPS(0.12)S(0.12)MEEDKFS(0.001)R;DYNAS(0.001)AS(0.001)T(0.002)IS(0.98)PPS(0.009)S(0.004)MEEDKFS(0.002)R 72.058 0.0017429 231270000 37474 31367 35262.2 34570 32648 32127 39329 29065.7 28700 42684 TRUE FALSE 40343.03825 29809.36039 36437.82415 31745.52042 31366.07548 33349.6155 34165.05506 32864.68679 31196.27412 41291.22458 0.977036614 0.721929676 0.882459276 0.768820028 0.759630546 0.807668357 0.827416852 0.795924246 0.755518259 1 15.33354758 -10.31979534 9.406207186 1.000002451 0.807442957 0.397619731 0.069790828 0 0 0.062331877 0.015117701 4.79E-11 10.31979534 -0.192559494 DYNASASTISPPS(ph)SMEEDKFSR ddPTM_A459_MK2206_30min_R2 1 DYNASASTISPPSSMEEDKFSR 22 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DYNASAST(0.001)IS(0.256)PPS(0.371)S(0.371)MEEDKFS(0.002)R 58.796 0.034515 28654000 141380 110090 102370 112650 103260 96253 120860 119620 74361 116010 TRUE FALSE 152204.1615 104623.0907 105782.9647 103446.1347 99205.49356 99915.97536 104990.9368 135254.7447 80828.78537 112224.6032 1.356245931 0.932265187 0.942600479 0.921777682 0.883990593 0.890321485 0.935542954 1.205214729 0.720241222 1 16.77602947 -4.760804147 24.92244134 0.93985344 1.356246428 0.552279271 0.113246752 10.92830765 428410.3149 0.0267921 0.1551303 1.73E-05 4.760804147 0.416392989 DYNPYNYSDSIS(ph)PFNK ddPTM_A459_MK2206_30min_R1 3 DYNPYNYSDSISPFNK 16 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4X8;H7C5M8;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 DYNPYNYSDS(0.024)IS(0.976)PFNK;DYNPYNYSDS(0.01)IS(0.99)PFNK;DYNPYNYSDS(0.022)IS(0.978)PFNK 275.74 2.60E-51 25408900 9804.4 9902.4 9091 7630 7073.2 5921.8 7104.8 6423.3 6753.1 7383.5 TRUE FALSE 8970.484295 9257.75196 8473.928249 8217.663922 6791.459466 6257.087198 6630.851755 6367.141765 7455.108911 8298.223723 1.081012587 1.115630558 1.021173751 0.990291922 0.818423279 0.754027296 0.79906881 0.767289721 0.898398159 1 13.01858684 -6.025800674 2.020893669 0.820407805 1.084537545 0.686710241 0.071206852 0.167116452 1.364890868 0.022294724 0.034647468 9.42E-07 6.025800674 0.26412974 DYNPYNYSDSIS(ph)PFNK ddPTM_A459_MK2206_30min_R2 2 DYNPYNYSDSISPFNK 16 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4X8;H7C5M8;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 DYNPYNYS(0.001)DS(0.234)IS(0.765)PFNK;DYNPYNYS(0.015)DS(0.421)IS(0.564)PFNK 180.93 9.92E-07 13314600 68844 72414 59131 67735 60990 46631 57950 45693 40125 55912 TRUE FALSE 74114.74957 68818.02606 61102.39803 62200.83383 58595.22615 48405.57538 50341.09539 51665.23199 43614.99997 54087.59602 1.370272577 1.272343959 1.129693359 1.150001819 1.083339443 0.894947806 0.930732721 0.955214056 0.806377121 1 15.72301016 -5.615080301 0.582113007 0.895830184 1.447686617 0.861979416 0.061911333 0.577926294 0.284213591 0.038515334 0.191898923 2.43E-06 5.615080301 0.551856433 DYNS(ph)LTR ddPTM_A459_MK2206_30min_R1 1 DYNSLTR 7 0 P16144-4;P16144-2;P16144-3;P16144;J3QRK0 P16144-4 ITGB4 Integrin beta-4 1 DYNS(0.99)LT(0.01)R 90.149 0.035936 0 2340.2 2310.1 1420.7 1611 2287.9 1917.7 2271.5 2293.1 1876.5 2088 TRUE FALSE 2141.153701 2159.71207 1324.266842 1735.079499 2196.768098 2026.278517 2119.97238 2273.051668 2071.56889 2346.677204 0.912419355 0.920327716 0.564315723 0.739377148 0.936118566 0.863467082 0.903393264 0.968625623 0.88276687 1 11.19640369 -6.267061518 24.80594313 0.919930014 0.778140232 0.32477176 0.099678897 548.7794123 2421314.393 0.032712545 0.038139991 5.41E-07 6.267061518 -0.141789782 DYNVTANS(ph)K ddPTM_A459_MK2206_30min_R2 1 DYNVTANSK 9 0 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2 P00338 LDHA L-lactate dehydrogenase A chain 1 DYNVT(0.001)ANS(0.999)K 100.73 0.013943 0 59059 44760 46415 36956 38289 28334 51772 40051 27319 61090 TRUE FALSE 63580.60245 42537.28349 47962.45293 33936.57658 36785.58147 29412.27022 44974.27421 45285.80322 29695.15724 59096.6383 1.075875114 0.719791932 0.811593592 0.574255619 0.622464873 0.497697857 0.761029316 0.766300834 0.502484711 1 15.85078844 DYNVTANSK ddPTM_A459_MK2206_30min_R1 1 DYNVTANSK 9 0 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2 P00338 LDHA L-lactate dehydrogenase A chain 0 155.06 0.011473 15016000 4564.5 4242.5 4519.6 4413.3 4548.2 3739.4 4184.6 4174.2 3648.6 3734.8 FALSE TRUE 4176.265306 3966.312479 4212.822144 4753.213131 4367.035563 3951.121596 3905.452969 4137.705409 4027.885027 4197.49522 0.994942242 0.944923644 1.003651445 1.132392744 1.040390836 0.941304609 0.930424638 0.985755836 0.959592523 1 12.03531297 -6.759986958 24.99991869 0.960463327 1.023881702 0.279164757 0.047959702 57.05668174 982100.2125 0.01818788 0.017264499 1.74E-07 6.759986958 0.063418375 DYNVTANSK ddPTM_A459_MK2206_30min_R2 1 DYNVTANSK 9 0 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2 P00338 LDHA L-lactate dehydrogenase A chain 0 135.86 0.03726 14476000 56296 71721 65289 79221 60727 60315 78094 68362 68292 70110 FALSE TRUE 60606.06504 68159.43943 67465.70267 72748.39088 58342.55285 62610.32959 67840.16399 77297.14812 74231.91472 67822.31644 0.893600635 1.004970679 0.994741941 1.072632058 0.860226485 0.923152332 1.000263152 1.139700797 1.094505741 1 16.04947244 -7.588230952 5.899882011 1.086647668 0.96260639 0.401921033 0.06493989 0.202663813 13.24806919 0.031922738 0.018215033 2.58E-08 7.588230952 -0.124041278 DYPFHEEF ddPTM_A459_MK2206_30min_R1 1 DYPFHEEF 8 0 P15121 P15121 AKR1B1 Aldose reductase 0 138.85 0.033824 11267000 10884 10882 11163 8435.9 10931 10638 13595 10240 11424 12499 FALSE TRUE 9958.258646 10173.57982 10405.28666 9085.63448 10495.59512 11240.31437 12688.10236 10150.47276 12611.56568 14047.47048 0.708900486 0.724228596 0.740723155 0.64678082 0.747151961 0.800166434 0.903230398 0.722583669 0.897781967 1 13.77802275 -8.392689685 0.311975849 1.030845306 0.679750951 0.705679502 0.056603168 1.022153757 0.31624581 0.131423968 0.084080068 4.05E-09 8.392689685 -0.351094355 DYQYS(ph)DQGIDY ddPTM_A459_MK2206_30min_R1 1 DYQYSDQGIDY 11 0 Q15417-3;Q15417;Q15417-2 Q15417-3 CNN3 Calponin-3 1 DYQYS(0.974)DQGIDY(0.025) 109.44 0.0093939 5034500 3017.9 3423.6 2624.1 2848.2 3293.4 3130.5 3085 3444.8 2788.3 2445.7 TRUE FALSE 2761.211757 3200.723018 2445.983403 3067.568858 3162.216904 3307.746205 2879.205279 3414.682477 3078.153763 2748.69178 1.004554886 1.164453229 0.889871837 1.116010489 1.150444341 1.203389274 1.047482042 1.242293698 1.119861377 1 11.42452943 -5.976585461 24.99929705 1.138637859 1.028914582 0.218152709 0.09014215 323.9050399 345825.3653 0.023977357 0.035562194 1.06E-06 5.976585461 -0.109723277 DYQYS(ph)DQGIDY ddPTM_A459_MK2206_30min_R2 2 DYQYSDQGIDY 11 0 Q15417-3;Q15417;Q15417-2 Q15417-3 CNN3 Calponin-3 1 DYQY(0.002)S(0.996)DQGIDY(0.002);DYQYS(0.999)DQGIDY(0.001) 102.73 0.013991 6672100 38016 44219 40460 41855 49622 44128 55880 37678 44291 45186 TRUE FALSE 40926.53419 42023.14876 41808.91621 38435.31261 47673.59095 45807.32196 48542.88888 42602.64397 48143.35112 43711.58452 0.936285761 0.961373266 0.956472218 0.879293511 1.090639735 1.047944669 1.110526864 0.974630511 1.101386547 1 15.41572806 -6.268122079 24.99985544 1.055424353 0.937008553 0.632213479 0.045109213 336.7300793 1259698.95 0.013266361 0.015388027 5.39E-07 6.268122079 -0.1184158 DYS(ph)PSRNPPEVEAR ddPTM_A459_MK2206_30min_R1 2 DYSPSRNPPEVEAR 14 1 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 DY(0.002)S(0.961)PS(0.037)RNPPEVEAR;DY(0.015)S(0.858)PS(0.126)RNPPEVEAR 84.195 0.014422 14820800 4923.9 4808.6 4546.5 4234.6 5411.3 4779.5 4774.9 4948.4 3698.2 3608.1 TRUE FALSE 4505.096449 4495.559266 4237.896247 4560.749626 5195.756462 5050.11116 4456.375133 4905.136661 4082.641124 4055.098668 1.110970859 1.10861896 1.045078454 1.124695106 1.281289776 1.245373189 1.09895603 1.209622025 1.006792056 1 11.9855213 -8.277512787 23.2150183 1.003395864 1.152594153 0.430970227 0.0687947 383.6001616 554025.4199 0.072017997 0.018893565 5.28E-09 8.277512787 0.149198288 DYS(ph)TSK ddPTM_A459_MK2206_30min_R1 1 DYSTSK 6 0 P40879 P40879 SLC26A3 Chloride anion exchanger 1 DYS(0.333)T(0.333)S(0.333)K 74.849 0.045419 3247000 3153.2 2695.2 3040.3 3019.1 3290.2 3030 3218.9 3018.1 2838.6 2817.4 TRUE FALSE 2885.003782 2519.74199 2833.932907 3251.631605 3159.144367 3201.555982 3004.173054 2991.71307 3133.682628 3166.440782 0.911118818 0.79576476 0.894990022 1.026904284 0.997695704 1.011089801 0.948753904 0.944818891 0.989654582 1 11.62864638 -5.593598973 5.244951019 0.985286462 0.851319875 0.717196928 0.03539721 0.098339741 4.976424564 0.00974127 0.017351856 2.55E-06 5.593598973 -0.133966587 DYSDHPS(ph)GGSYR ddPTM_A459_MK2206_30min_R1 1 DYSDHPSGGSYR 12 0 H3BT71;H0Y6E7;P38159;P38159-2;H3BUY5;Q96E39 H3BT71;P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 1 DYSDHPS(0.855)GGS(0.145)YR 135.91 0.0014508 2640400 1532.1 1094.6 1190.4 1109 1766.2 1884.4 1665.6 1279.3 1050.8 965.35 TRUE FALSE 1401.78685 1023.341341 1109.598965 1194.415372 1695.848514 1991.0931 1554.490863 1268.115215 1160.03442 1084.944846 1.292035125 0.94321969 1.022723845 1.100899623 1.563073478 1.835202137 1.432783306 1.168829199 1.069210499 1 10.08340599 -6.1505136 7.188705931 1.381679337 1.070856302 0.197719055 0.24446373 0.396413021 22.86632629 0.078060546 0.101143719 7.07E-07 6.1505136 -0.310823036 DYSEADGLS(ph)ER ddPTM_A459_MK2206_30min_R1 2 DYSEADGLSER 11 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;Q4VXN2;Q4VXN1;Q4VXN0;Q4VXN7;Q4VXN6;Q4VXN5 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 DYSEADGLS(1)ER;DYSEADGLS(1)ER 161.25 0.00060989 37654000 7381.9 7349.6 6838.5 5336 7024.2 6614.8 8535.5 6557.4 8031.5 10161.6 TRUE FALSE 6754.030641 6871.139704 6374.321673 5746.979645 6744.41124 6989.32426 7966.112369 6500.069343 8866.403166 11420.49572 0.591395575 0.601649864 0.558147547 0.503216304 0.590553283 0.611998326 0.697527722 0.569158248 0.776358871 1 13.47933765 -8.910568671 0.615940077 1.011849759 0.568883476 0.873025057 0.048857398 0.477657338 0.342796924 0.058565468 0.020800609 1.23E-09 8.910568671 -0.442966283 DYSEADGLS(ph)ER ddPTM_A459_MK2206_30min_R2 2 DYSEADGLSER 11 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;Q4VXN2;Q4VXN1;Q4VXN0;Q4VXN7;Q4VXN6;Q4VXN5 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 DYSEADGLS(1)ER;DYSEADGLS(1)ER 161.25 0.00054829 79023000 204392 173660 160116 187691 130655 158918 170866 142714 154946 156762 TRUE FALSE 220040.4087 165036.2969 165454.1875 172356.0449 125524.8282 164965.7358 148431.089 161367.2098 168422.923 151646.8688 1.451005289 1.088293469 1.091049152 1.136561845 0.82774428 1.087828171 0.978794288 1.064098528 1.110625787 1 17.21035618 -2.205091383 1.15331788 1.028071705 199.9999992 0.683543728 0.083898947 410.7305297 1.555902676 0.024951923 215001.6884 0.006236036 2.205091383 198.9719275 DYSTS(ph)K ddPTM_A459_MK2206_30min_R1 2 DYSTSK 6 0 P40879 P40879 SLC26A3 Chloride anion exchanger 1 DYS(0.003)T(0.007)S(0.99)K;DYS(0.016)T(0.069)S(0.915)K 84.025 0.037925 6791500 6001.7 5961.9 6264.2 5542.7 6872.6 5925.9 6734.4 6303.8 5451.5 5353 TRUE FALSE 5491.223899 5573.779226 5839.003557 5969.599714 6598.849789 6261.419337 6285.160464 6248.686541 6018.202933 6016.170053 0.91274413 0.926466369 0.970551614 0.992259139 1.096852272 1.040765019 1.044711238 1.03864859 1.000337903 1 12.55462963 -5.661411166 1.835948311 1.03897955 0.919115142 0.738002939 0.027291371 0.172529848 1.170144863 0.008441479 0.019406432 2.18E-06 5.661411166 -0.119864408 DYTGCSTSES(ph)LSPVK ddPTM_A459_MK2206_30min_R2 1 DYTGCSTSESLSPVK 15 0 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 DYTGCSTS(0.002)ES(0.994)LS(0.004)PVK 172.09 4.14E-05 27689000 97410 44061 66767 47398 58840 59871 101300 39547 68606 87372 TRUE FALSE 104867.7845 41872.99481 68992.97846 43525.43178 56529.64595 62149.43286 87999.18832 44715.92869 74573.22587 84521.0588 1.240729659 0.495414935 0.816281521 0.514965529 0.668823211 0.735312995 1.041151041 0.52905074 0.882303498 1 16.36702322 -8.520044025 24.70070812 1.00000002 0.744015383 0.107873764 0.225042769 383.7080118 3343476.363 0.204347042 0.052762179 3.02E-09 8.520044025 -0.255984637 DYTGCSTSES(ph)LSPVKQAPR ddPTM_A459_MK2206_30min_R2 1 DYTGCSTSESLSPVKQAPR 19 1 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 DY(0.001)T(0.002)GCS(0.036)T(0.017)S(0.027)ES(0.458)LS(0.458)PVKQAPR 63.125 0.0162 6297700 3209.8 5947 8076.7 3402.6 10205 7399.8 12027 2590.5 15265 6584 TRUE FALSE 3455.544756 5651.680628 8345.973147 3124.596696 9804.300424 7681.404574 10447.84045 2929.087245 16592.72211 6369.164619 0.542542855 0.887350377 1.310371712 0.490581871 1.539338518 1.206030152 1.640378461 0.459885624 2.605164586 1 12.63688845 -4.948017605 0.432809303 1.43835278 0.149566885 0.183685682 0.564720568 8.337051648 1.360448893 0.414493144 5.478964476 1.13E-05 4.948017605 -1.288785895 DYTGCSTSESLS(ph)PVK ddPTM_A459_MK2206_30min_R1 4 DYTGCSTSESLSPVK 15 0 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 DYTGCST(0.01)S(0.063)ES(0.209)LS(0.718)PVK;DYTGCSTSES(0.039)LS(0.961)PVK;DYTGCSTS(0.002)ES(0.335)LS(0.664)PVK;DYTGCST(0.001)S(0.04)ES(0.01)LS(0.949)PVK 210.37 1.20E-06 57221000 7688.7 8260.7 6037.64 5872.27 6447.04 6569.23 8642.5 8378.5 10739.3 11125.8 TRUE FALSE 7034.73569 7722.926929 5627.821819 6324.553253 6190.240745 6941.174126 8065.974594 8305.247658 11855.68867 12504.1481 0.56259216 0.617629195 0.450076389 0.505796413 0.495054977 0.555109718 0.645063904 0.664199399 0.948140455 1 13.61011915 -8.135807612 1.302744293 1.015593135 0.53036992 0.917541085 0.050864877 0.114387779 0.359592311 0.049052632 0.015995811 7.31E-09 8.135807612 -0.485223215 DYTGCSTSESLS(ph)PVK ddPTM_A459_MK2206_30min_R2 3 DYTGCSTSESLSPVK 15 0 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 DYTGCSTSES(0.024)LS(0.976)PVK;DYTGCSTSES(0.289)LS(0.711)PVK;DYTGCSTS(0.002)ES(0.237)LS(0.76)PVK 227.63 1.02E-13 39694900 135193 82116 97965.1 68878.9 70758.1 88269 149692 67033.4 111914.4 130052 TRUE FALSE 145543.48 78038.23885 101231.2075 63251.27354 67979.78146 91628.13865 130037.2606 75794.89554 121648.5122 125808.4139 1.156866028 0.620294275 0.804645766 0.502758691 0.540343681 0.72831487 1.033613385 0.60246285 0.966934631 1 16.94086889 -8.375953536 6.659941499 0.996149159 0.740255705 0.182493743 0.198473722 0.420376037 20.99784824 0.190626508 0.049386493 4.21E-09 8.375953536 -0.255893454 DYTGCSTSESLS(ph)PVKQAPR ddPTM_A459_MK2206_30min_R1 1 DYTGCSTSESLSPVKQAPR 19 1 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 DYTGCS(0.005)T(0.004)S(0.037)ES(0.052)LS(0.901)PVKQAPR 83.064 0.0026199 7031400 1312.2 977.19 1168 1266.3 1490.6 1149.8 1317.5 1661.9 1153.9 945.57 TRUE FALSE 1200.590499 913.5747534 1088.719414 1363.830645 1431.226246 1214.900682 1229.611979 1647.370184 1273.852034 1062.71435 1.129739614 0.859661633 1.024470418 1.283346409 1.346764768 1.143205304 1.157048438 1.550153325 1.198677739 1 10.05353815 -5.713471519 5.454175479 1.259981243 0.984639885 0.334304093 0.150073329 0.191259329 12.6574331 0.040397574 0.06968439 1.93E-06 5.713471519 -0.275341357 DYTYEELLNR ddPTM_A459_MK2206_30min_R2 2 DYTYEELLNR 10 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 0 ; 161.27 0.0059319 9518300 28693 33292 31564 32990 31519 30455 32051 26023 29151 30800 FALSE TRUE 30889.75814 31638.76769 32616.32801 30294.61147 30281.40569 31613.98637 27842.6652 29424.29545 31686.50129 29794.99852 1.036743067 1.061881835 1.094691379 1.016768349 1.016325128 1.061050107 0.934474462 0.987558211 1.063483902 1 14.86278256 -5.881625803 7.08898146 1.009333039 1.063952045 0.304785171 0.036769964 0.276340283 16.0057504 0.010719046 0.016001679 1.31E-06 5.881625803 0.054619007 EAAAAPTVAPGPAQPGHVS(ph)PTPATTSPGEK ddPTM_A459_MK2206_30min_R1 1 EAAAAPTVAPGPAQPGHVSPTPATTSPGEK 30 0 M0QXQ4 M0QXQ4 NUMBL 1 EAAAAPT(0.006)VAPGPAQPGHVS(0.962)PT(0.013)PAT(0.008)T(0.009)S(0.002)PGEK 91.532 5.54E-07 6790400 1026.8 1210.9 1312.5 1020.7 1078.9 1100.3 1250.2 852.86 1268 1510 TRUE FALSE 939.4652681 1132.07019 1223.411157 1099.314491 1035.925128 1162.598035 1166.801439 845.4035349 1399.813138 1697.0702 0.553580676 0.667073283 0.720896022 0.647771961 0.610419727 0.685061841 0.6875387 0.498154723 0.824841033 1 10.72883053 -8.519019293 5.856979966 0.999866548 0.641569129 0.774926844 0.063529905 0.056118982 9.904105276 0.060098884 0.015583582 3.03E-09 8.519019293 -0.358297419 EAAAQEAGADTPGKGEPPAPKS(ph)PPK ddPTM_A459_MK2206_30min_R1 1 EAAAQEAGADTPGKGEPPAPKSPPK 25 2 O95466;O95466-2;O95466-3;K7EK60;K7ERL1;K7EJE6 O95466 FMNL1 Formin-like protein 1 1 EAAAQEAGADT(0.001)PGKGEPPAPKS(0.999)PPK 62.57 0.0016736 18502000 1700.9 2160.3 2588 2169.1 1318.2 1317.2 1541.2 2061.3 1801.8 1221.5 TRUE FALSE 1556.229523 2019.664077 2412.333771 2336.164458 1265.693303 1391.778726 1438.38936 2043.278271 1989.103558 1372.828642 1.133593426 1.471169828 1.757199476 1.701715995 0.921960152 1.013803678 1.047755937 1.488370951 1.448908842 1 10.42293584 -6.254477428 24.94737714 1.165616461 1.529957533 0.363203819 0.234491136 668.1155711 2394116.18 0.076730607 0.09681983 5.57E-07 6.254477428 0.364341072 EAAAQEAGADTPGKGEPPAPKS(ph)PPK ddPTM_A459_MK2206_30min_R2 3 EAAAQEAGADTPGKGEPPAPKSPPK 25 2 O95466;O95466-2;O95466-3;K7EK60;K7ERL1;K7EJE6 O95466 FMNL1 Formin-like protein 1 1 EAAAQEAGADTPGKGEPPAPKS(1)PPK;EAAAQEAGADTPGKGEPPAPKS(1)PPK;EAAAQEAGADTPGKGEPPAPKS(1)PPK 75.539 0.00011881 52915800 107613 147953 151468 112823 146815 84554 169572 121106 120071 150258 TRUE FALSE 115851.934 140605.8692 156517.8675 103605 141050.3054 87771.76172 147306.9927 136934.97 130514.5585 145355.0938 0.797026998 0.967326741 1.076796578 0.712771719 0.970384331 0.603843728 1.013428487 0.942072042 0.897901512 1 17.1492221 EAAENSLVAYK ddPTM_A459_MK2206_30min_R1 1 EAAENSLVAYK 11 0 P62258;P62258-2;K7EM20 P62258 YWHAE 14-3-3 protein epsilon 0 172.8 0.0031378 6104000 2377.2 1938.8 2385.6 2590.4 2722 2525.4 2349.6 2644.5 2317.2 2351.3 FALSE TRUE 2175.006657 1812.583768 2223.672119 2789.913057 2613.576976 2668.385966 2192.862471 2621.379415 2558.081232 2642.596795 0.823056571 0.685910076 0.841472344 1.05574678 0.989018446 1.009759026 0.829813491 0.991971011 0.968017988 1 11.3677406 -5.55730292 5.635285788 0.972405032 0.75569668 0.67919744 0.062975959 0.096279055 8.198637966 0.017274137 0.031164261 2.77E-06 5.55730292 -0.216708352 EAAEPLSEPKEDQEAAELLS(ph)EPEEESER ddPTM_A459_MK2206_30min_R1 5 EAAEPLSEPKEDQEAAELLSEPEEESER 28 1 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 EAAEPLSEPKEDQEAAELLS(0.99)EPEEES(0.01)ER;EAAEPLSEPKEDQEAAELLS(0.994)EPEEES(0.006)ER;EAAEPLSEPKEDQEAAELLS(0.998)EPEEES(0.002)ER;EAAEPLSEPKEDQEAAELLS(0.997)EPEEES(0.003)ER;EAAEPLSEPKEDQEAAELLS(1)EPEEESER 165.98 6.15E-22 188200700 15523.57 15445.39 15624.09 17182.61 15467.58 12928.62 14672.8 16171 13262.31 11755.69 TRUE FALSE 14203.20885 14439.8923 14563.5703 18506.0176 14851.47354 13660.62729 13694.00428 16029.61865 14640.97458 13212.07363 1.075017386 1.092931565 1.102292548 1.400689863 1.124083467 1.033950285 1.036476534 1.213255323 1.10815115 1 13.68956929 -6.518404636 24.95663127 1.087959183 1.170799462 0.144651696 0.101089806 436.4267032 2434414.165 0.034928356 0.035754944 3.03E-07 6.518404636 0.082840279 EAAEPLSEPKEDQEAAELLS(ph)EPEEESER ddPTM_A459_MK2206_30min_R2 2 EAAEPLSEPKEDQEAAELLSEPEEESER 28 1 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 EAAEPLSEPKEDQEAAELLS(0.997)EPEEES(0.003)ER;EAAEPLSEPKEDQEAAELLS(1)EPEEESER 139.22 7.88E-13 22332200 41025 64091 62521 62207 71757 61962 67089 45184 63199 54539 TRUE FALSE 44165.90554 60908.33414 64605.41894 57124.48911 68939.45963 64320.00733 58280.13371 51089.70394 68695.93478 52759.3969 0.837119227 1.154454708 1.224529141 1.082735825 1.306676416 1.219119458 1.104639877 0.968352691 1.302060653 1 15.68714045 -4.761496602 9.764393118 1.156148853 0.835627409 0.424417512 0.109673384 0.071147267 130.8520043 0.026653763 0.150938394 1.73E-05 4.761496602 -0.320521444 EAAFS(ph)PGQQDWSR ddPTM_A459_MK2206_30min_R1 4 EAAFSPGQQDWSR 13 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EAAFS(1)PGQQDWSR;EAAFS(1)PGQQDWSR;EAAFS(1)PGQQDWSR;EAAFS(1)PGQQDWSR 151.22 0.00047135 51084700 15284.8 13871.1 13302.7 10547.1 13358.1 11926.5 12405.5 11962.2 10249.2 10396.9 TRUE FALSE 13984.7475 12968.08887 12399.74979 11359.43947 12826.01859 12601.76812 11577.95173 11857.61575 11314.64102 11684.94646 1.196817421 1.109811577 1.061173008 0.972143048 1.097653175 1.078461777 0.99084337 1.014777071 0.968309188 1 13.5123635 -1.522878745 0.566054866 1.01286088 10.28562606 0.669775586 0.039938799 93.57742073 0.813719031 0.020417359 1061.347534 0.03 1.522878745 9.27276518 EAAFS(ph)PGQQDWSR ddPTM_A459_MK2206_30min_R2 5 EAAFSPGQQDWSR 13 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EAAFS(1)PGQQDWSR;EAAFS(1)PGQQDWSR;EAAFS(1)PGQQDWSR;EAAFS(1)PGQQDWSR;EAAFS(1)PGQQDWSR 176.19 0.00010056 55494700 116795 120382.3 108244.9 129033 107191.7 118675 118589 91101 97403.9 115876.2 TRUE FALSE 125736.915 114404.29 111853.7309 118490.5911 102982.8153 123191.2603 103018.1218 103008.2135 105875.9152 112095.1691 1.121697893 1.020599647 0.997846132 1.057053503 0.918708773 1.09898813 0.919023743 0.918935351 0.944518091 1 16.77436458 -1.522878745 0.360800141 0.955146708 2.818214224 0.377250532 0.056415606 68.97223784 0.961988133 0.04577101 88.31290129 0.03 1.522878745 1.863067516 EAAGPAPS(ph)PMR ddPTM_A459_MK2206_30min_R1 3 EAAGPAPSPMR 11 0 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR 130.15 0.0024482 242612800 13213.8 12974.1 12393.7 10854.3 13622.6 12791.4 13779.2 12404.5 10668.7 10103.6 TRUE FALSE 12089.89692 12129.48373 11552.45017 11690.30007 13079.983 13515.63801 12860.01471 12296.04876 11777.74954 11355.31025 1.064691026 1.06817722 1.017361034 1.029500719 1.151882486 1.190248238 1.132511083 1.08284569 1.037201916 1 13.4710795 -3.685805945 11.52523792 1.083216242 1.077707726 0 0.059527223 0 0 0.014899925 0 0.000206155 3.685805945 -0.005508516 EAAGPAPS(ph)PMR ddPTM_A459_MK2206_30min_R2 2 EAAGPAPSPMR 11 0 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 EAAGPAPS(1)PMR;EAAGPAPS(1)PMR 140.33 0.0010954 251410000 814680 849530 827560 912420 1042560 1007690 1036200 796560 880040 940750 TRUE FALSE 877052.5272 807343.5755 855150.4374 837872.3673 1001623.856 1046038.349 900145.6953 900673.127 956584.2885 910053.4045 0.963737428 0.887138679 0.93967061 0.920684834 1.100620965 1.149425236 0.989113046 0.989692608 1.051129839 1 19.79559168 -6.24720536 24.72390829 1.048408797 0.925750269 0.57146214 0.050396568 542.4891558 942281.1252 0.016103111 0.020682279 5.66E-07 6.24720536 -0.122658528 EAALPPVS(ph)PLK ddPTM_A459_MK2206_30min_R1 6 EAALPPVSPLK 11 0 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK 148.62 0.00064572 1331574000 76273.5 85363.4 82362.3 65163.4 54666.1 52020.3 62868.5 57407.9 68160.8 66831.6 TRUE FALSE 69786.0383 79806.22714 76771.77655 70182.29636 52488.63348 54965.64443 58674.65708 56905.98878 75246.35908 75111.20316 0.929102922 1.062507639 1.022108199 0.93437854 0.698812311 0.731790227 0.781170513 0.757623183 1.001799411 1 16.19674049 -6.036189325 5.697843368 0.809063764 1.006349048 0.370614174 0.102282947 0.177645093 16.11656044 0.029843084 0.040166397 9.20E-07 6.036189325 0.197285285 EAALPPVS(ph)PLK ddPTM_A459_MK2206_30min_R2 6 EAALPPVSPLK 11 0 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK 164.22 0.00064843 1481819000 2714730 2624870 2437180 2385140 2192340 1615130 2405950 1813840 1598290 2311870 TRUE FALSE 2922571.816 2494522.773 2518434.365 2190266.432 2106257.716 1676594.904 2090045.875 2050915.116 1737306.375 2236433.871 1.306800015 1.115401982 1.126093822 0.979356672 0.941792978 0.749673364 0.934544009 0.917047064 0.776819917 1 21.09276867 -5.492601588 0.926401204 0.871223619 1.300765908 0.75306433 0.078330368 0.430875864 0.57683354 0.029804824 0.150293226 3.22E-06 5.492601588 0.429542288 EAALPPVS(ph)PLKAALSEEELEK ddPTM_A459_MK2206_30min_R1 2 EAALPPVSPLKAALSEEELEK 21 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAALPPVS(0.997)PLKAALS(0.003)EEELEK;EAALPPVS(0.999)PLKAALS(0.001)EEELEK 69.081 0.0039783 42739000 12719.9 14024.5 15246.9 16396.3 11916.2 7127.2 7249.4 12848.9 7816.8 4436.8 TRUE FALSE 11638.00571 13111.5025 14211.98291 17659.14587 11441.55252 7530.735905 6765.805753 12736.56342 8629.384333 4986.46428 2.333919398 2.629418715 2.850112246 3.541416297 2.294522106 1.510235606 1.356834296 2.554227346 1.730561746 1 12.2838015 -6.537085747 5.603081713 1.72284065 2.838000573 0.594666437 0.46792922 0.129939118 13.45738092 0.158015236 0.163345763 2.90E-07 6.537085747 1.115159923 EAALPPVS(ph)PLKAALSEEELEK ddPTM_A459_MK2206_30min_R2 1 EAALPPVSPLKAALSEEELEK 21 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAALPPVS(1)PLKAALSEEELEK 64.26 0.0060479 4035200 12606 33423 31177 25316 38403 25013 31438 19041 29385 25011 TRUE FALSE 13571.12505 31763.26242 32216.42562 23247.60182 36895.10526 25964.88724 27310.15284 21529.72408 31940.85418 24194.89312 0.560908659 1.312808545 1.331538249 0.960847469 1.524912926 1.073155691 1.128756912 0.889845802 1.320148596 1 14.56241495 -10.47641437 8.521142257 1.000000024 1.133253943 0.018026481 0.260780665 6.85E-10 0 0.240713453 0.058381588 3.34E-11 10.47641437 0.133253919 EAALPPVS(ph)PLKAALSEEELEKK ddPTM_A459_MK2206_30min_R1 2 EAALPPVSPLKAALSEEELEKK 22 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAALPPVS(1)PLKAALSEEELEKK;EAALPPVS(1)PLKAALSEEELEKK 65.784 0.0026337 70277000 28593 36345 34995 41821 24371.9 15734.5 15922 32911 14701.8 6753.1 TRUE FALSE 26161.0152 33978.93389 32619.6369 45042.06067 23401.11561 16625.37379 14859.87243 32623.2626 16230.10472 7589.725011 3.446898954 4.476965087 4.297868085 5.934610358 3.083262645 2.190510693 1.95789339 4.298345796 2.138431194 1 12.8898319 -6.478163454 8.937574872 2.514977473 4.519151808 0.539419899 0.961108781 0.352230325 67.62564054 0.297116083 0.334407786 3.33E-07 6.478163454 2.004174336 EAALPPVS(ph)PLKAALSEEELEKK ddPTM_A459_MK2206_30min_R2 1 EAALPPVSPLKAALSEEELEKK 22 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAALPPVS(0.999)PLKAALS(0.001)EEELEKK 62.966 0.0038637 6338500 18426 58190 37564 40718 64884 30316 47460 27985 55784 35124 TRUE FALSE 19836.70873 55300.36922 38816.36501 37391.20915 62336.32814 31469.69662 41228.44499 31642.73559 60635.99149 33977.90676 0.583811971 1.627539024 1.142400128 1.100456524 1.83461355 0.926181146 1.213389785 0.931273837 1.784571131 1 15.05230936 -4.7419317 24.9376889 1.275924673 0.583809551 0.293065734 0.326229207 1726.504862 2206963.596 0.076790098 2.906996413 1.81E-05 4.7419317 -0.692115123 EAANEAGDSS(ph)QDEAEDDVK ddPTM_A459_MK2206_30min_R2 2 EAANEAGDSSQDEAEDDVK 19 0 A0A0C4DH01;Q9NVU0-3;Q9NVU0-2;Q9NVU0-5;Q9NVU0-4;Q9NVU0 A0A0C4DH01 POLR3E DNA-directed RNA polymerase III subunit RPC5 1 EAANEAGDS(0.096)S(0.904)QDEAEDDVK;EAANEAGDS(0.186)S(0.814)QDEAEDDVK 289.72 1.93E-151 7987400 50043 44480 50853 44040 40568 33540 53859 45927 33555 49695 TRUE FALSE 53874.33056 42271.18788 52548.41364 40441.79112 38975.09648 34816.3882 46787.2486 51929.81659 36473.55325 48073.45622 1.120666888 0.879304115 1.093085827 0.841249918 0.81074047 0.7242331 0.973244952 1.08021808 0.758704618 1 15.55295291 -1.522879015 0.896255048 0.894524097 102.0445499 0.205979451 0.122374493 1546.558526 3.459499831 0.042050796 319898.3794 0.029999981 1.522879015 101.1500258 EAARS(ph)PDKPGGS(ph)PSASR ddPTM_A459_MK2206_30min_R1 1 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 EAARS(1)PDKPGGS(0.926)PS(0.073)AS(0.002)R 107.83 0.025722 17014000 6659.5 7283.6 6881.2 6869 5869.1 4308.3 5307 5614.2 6521 5858.8 TRUE FALSE 6093.074555 6809.436316 6414.123316 7398.05157 5635.321319 4552.232223 4952.979713 5565.115641 7198.881286 6584.632376 0.92534772 1.034140697 0.974104999 1.12353297 0.8558293 0.691341895 0.752202922 0.845167251 1.093285225 1 12.68488718 -6.341521303 9.984767422 0.849849606 1.01274622 0.24423061 0.117633714 0.679856558 81.72932974 0.037822284 0.042886391 4.55E-07 6.341521303 0.162896614 EAARS(ph)PDKPGGSPSASR ddPTM_A459_MK2206_30min_R1 2 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 EAARS(1)PDKPGGSPSASR;EAARS(1)PDKPGGSPSASR 83.948 0.014369 133470000 3814.6 4496.8 4896.8 4058.4 3927.5 3436.7 3782.04 4332.1 4393.6 3707.54 TRUE FALSE 3490.148239 4204.057503 4564.418859 4370.978671 3771.059358 3631.282984 3529.747012 4294.224906 4850.330443 4166.858046 0.837597106 1.00892746 1.095410213 1.0489867 0.905012678 0.871467889 0.847100375 1.030566643 1.164025841 1 12.02474424 -7.994227251 24.92113594 1.087107378 0.951820675 0.284384991 0.089154611 186.3040571 804281.719 0.053311125 0.025487726 1.01E-08 7.994227251 -0.135286703 EAARS(ph)PDKPGGSPSASR ddPTM_A459_MK2206_30min_R2 1 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 EAARS(0.994)PDKPGGS(0.006)PSASR 155.26 0.0017047 2272500 17215 17026 16174 15943 18034 13161 21257 12684 15840 17683 TRUE FALSE 18532.99364 16180.5136 16713.23309 14640.4059 17325.89455 13661.85108 18465.93037 14341.84235 17217.73457 17106.00516 1.083420323 0.945896686 0.977038936 0.855863527 1.012854514 0.798658188 1.079499871 0.838409799 1.00653159 1 14.06221526 -4.756920339 5.1386695 0.940312296 1.092471372 0.189315849 0.08456876 0.265431502 19.2366038 0.018960761 0.145905625 1.75E-05 4.756920339 0.152159076 EAARSPDKPGGSPS(ph)ASR ddPTM_A459_MK2206_30min_R2 1 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 EAARS(0.004)PDKPGGS(0.306)PS(0.491)AS(0.199)R 156.52 0.0014969 3172500 9966.7 13063 10475 11818 13322 10695 14114 9741.9 10892 15546 TRUE FALSE 10729.75822 12414.31042 10824.23127 10852.4316 12798.91134 11102.00572 12260.81485 11015.19978 11839.36647 15038.73529 0.713474771 0.82548899 0.719756752 0.721631931 0.851063011 0.738227351 0.81528231 0.732455194 0.78725812 1 13.87639563 -14.52287875 0.395871685 4.636213131 0.76362695 0.68985099 0.046988491 390.1854597 2.771041761 1224.57028 0.028429433 3.00E-15 14.52287875 -3.87258618 EAAS(ph)SPAGEPLR ddPTM_A459_MK2206_30min_R1 2 EAASSPAGEPLR 12 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 EAAS(0.927)S(0.073)PAGEPLR;EAAS(0.937)S(0.063)PAGEPLR 121.21 0.0038432 78849000 15060.6 14336.4 13896.7 11696.5 13344.2 13560.3 15759.2 11954.1 13899.5 14080.4 TRUE FALSE 13779.61688 13403.09775 12953.43072 12597.36646 12812.67226 14328.07247 14707.93252 11849.58656 15344.40276 15824.78625 0.870761643 0.846968644 0.818553282 0.796052866 0.809658472 0.905419652 0.929423771 0.748799154 0.969643603 1 13.94989839 -6.765569697 24.90377461 0.896130101 0.827086637 0.27056664 0.065373406 163.0865993 983325.2935 0.022141296 0.020237693 1.72E-07 6.765569697 -0.069043464 EAAS(ph)SPAGEPLR ddPTM_A459_MK2206_30min_R2 1 EAASSPAGEPLR 12 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 EAAS(0.5)S(0.5)PAGEPLR 91.202 0.023362 8071000 29800 37648 33051 36399 29329 37632 39743 31821 30613 34792 TRUE FALSE 32081.51091 35778.45507 34152.90384 33425.08527 28177.39609 39064.11213 34524.69636 35980.11396 33275.6634 33656.73989 0.95319722 1.06303983 1.01474189 0.99311714 0.837199211 1.160662389 1.025788489 1.069031465 0.988677558 1 15.03860782 -6.780018386 24.99998337 1.051706158 0.980821289 0.225512094 0.069958283 420.929386 566400.4522 0.024756293 0.021871979 1.66E-07 6.780018386 -0.070884869 EAASGT(ph)TPQK ddPTM_A459_MK2206_30min_R1 1 EAASGTTPQK 10 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 EAAS(0.011)GT(0.622)T(0.366)PQK 137.4 0.0040944 11990000 14215 8350.3 5103.7 7727.7 3479.9 4020.9 9348.3 12806 0 4492.1 TRUE FALSE 13005.9396 7806.693952 4757.275064 8322.888793 3341.288214 4248.559883 8724.691964 12694.03849 0 5048.615262 2.576139977 1.546303996 0.942293048 1.648548832 0.661822706 0.841529739 1.72813564 2.51436044 0 1 12.30167202 -4.79415093 3.197412802 1.228044613 2.751913774 0.296975269 0.648009542 0.432853506 6.858152007 0.163124513 1.641910724 1.61E-05 4.79415093 1.523869161 EAASGT(ph)TPQK ddPTM_A459_MK2206_30min_R2 2 EAASGTTPQK 10 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 EAAS(0.111)GT(0.658)T(0.231)PQK;EAAS(0.001)GT(0.535)T(0.464)PQK 154.15 0.0013291 116549000 291386 111718 176717 176575 354093 170519 277190 941600 533425 388486 TRUE FALSE 313694.7362 106170.2466 182608.6566 162148.2577 340189.5296 177008.22 240794.62 1064670.353 579821.3423 375809.7336 0.834716901 0.282510635 0.485907203 0.431463699 0.905217452 0.471004884 0.640735453 2.833003666 1.542858767 1 18.51964291 -7.660775294 9.321174555 1.888035124 0.561405133 0.592968185 0.458703073 0.164813106 13.78340316 0.201736432 0.11615691 2.18E-08 7.660775294 -1.326629991 EAASGTT(ph)PQK ddPTM_A459_MK2206_30min_R1 1 EAASGTTPQK 10 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 EAAS(0.003)GT(0.126)T(0.871)PQK 196.67 0.00040879 14802000 14950 8363.2 4682.2 7077.5 3907.1 4083.1 9083.1 11969 0 4367.4 TRUE FALSE 13678.42399 7818.75416 4364.385309 7622.610276 3751.471934 4314.281593 8477.182972 11864.35629 0 4908.466484 2.78670009 1.592911795 0.88915455 1.552951477 0.764285943 0.878946939 1.727053246 2.417120771 0 1 12.26105665 -4.79598732 3.176743451 1.214868945 2.990954342 0.387905756 0.614360832 0.352804776 5.503675366 0.154219448 1.550170906 1.60E-05 4.79598732 1.776085396 EAASGTT(ph)PQK ddPTM_A459_MK2206_30min_R2 2 EAASGTTPQK 10 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 EAAS(0.008)GT(0.043)T(0.949)PQK;EAAS(0.003)GT(0.33)T(0.667)PQK 140.45 0.0033124 119409000 188419 61372 87831 121220 186271 89464 156603 555000 305023 226233 TRUE FALSE 202844.5035 58324.35572 90759.2417 111315.9382 178957.0646 92868.61521 136040.838 627540.4056 331553.3492 218851.0357 0.926861062 0.266502535 0.414707846 0.508637932 0.817711755 0.424346245 0.621613864 2.867431737 1.514972721 1 17.73958969 -7.661562758 9.575148508 1.890775034 0.548059448 0.584748736 0.471207845 0.17378963 15.10041268 0.206883572 0.119163298 2.18E-08 7.661562758 -1.342715586 EAASQRPLS(ph)SSASNR ddPTM_A459_MK2206_30min_R1 1 EAASQRPLSSSASNR 15 1 A0A087X2H1;Q9ULT8;H0YJP0 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 EAASQRPLS(0.872)S(0.064)S(0.064)ASNR 160.93 0.00059208 1327600 677.59 720.25 943.23 726.42 755.44 694.89 733.54 673.52 520.29 618.13 TRUE FALSE 619.9574123 673.3615941 879.2061756 782.3689943 725.3492251 734.2340713 684.606885 667.6314856 574.3760074 694.708611 0.892399205 0.969271985 1.265575468 1.126182952 1.044105706 1.05689502 0.985459046 0.961023766 0.826786941 1 9.44026417 -7.528223265 1.755272202 0.914167844 1.068775645 0.256287728 0.099925222 0.518328489 3.120633643 0.068405957 0.033614174 2.96E-08 7.528223265 0.154607801 EAASS(ph)PAGEPLR ddPTM_A459_MK2206_30min_R1 2 EAASSPAGEPLR 12 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 EAAS(0.085)S(0.915)PAGEPLR;EAAS(0.152)S(0.848)PAGEPLR 164.13 0.00050729 73152800 9212 9565.8 10230.9 7822.2 9532.7 9491.3 11397.7 8709.2 9064.9 9857 TRUE FALSE 8428.471026 8943.064681 9536.455013 8424.667199 9152.992373 10028.6892 10637.38023 8633.056383 10007.22879 11078.15958 0.760818705 0.807269892 0.860833873 0.760475343 0.826219582 0.905266722 0.960211862 0.779286155 0.90332954 1 13.4354306 -6.669183807 4.408311022 0.898974395 0.80176506 0.444388504 0.059452479 0.236673427 8.258152665 0.020131813 0.01988166 2.14E-07 6.669183807 -0.097209335 EAASS(ph)PAGEPLR ddPTM_A459_MK2206_30min_R2 3 EAASSPAGEPLR 12 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 EAAS(0.03)S(0.97)PAGEPLR;EAAS(0.083)S(0.917)PAGEPLR;EAAS(0.051)S(0.949)PAGEPLR 170.95 0.00028576 220548100 245051 249991 257067 292681 276991 289847 302188 231715 229637 249468 TRUE FALSE 263812.293 237576.8105 265637.4855 268768.0261 266114.9416 300877.3307 262510.3526 262000.9461 249610.4112 241327.8796 1.093169564 0.984456545 1.100732688 1.113704834 1.102711141 1.246757446 1.087774662 1.085663814 1.034320658 1 17.88063507 -3.71566968 15.41230806 1.090824414 89.49883168 0 0.069192049 0 0 0.016345641 0 0.000192455 3.71566968 88.40800726 EAASS(ph)PAGEPLRK ddPTM_A459_MK2206_30min_R1 2 EAASSPAGEPLRK 13 1 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 EAAS(0.239)S(0.761)PAGEPLRK;EAAS(0.146)S(0.854)PAGEPLRK 139.48 0.001675 18663400 6446.1 5580.3 5314.3 4348.8 6572.1 6876.9 6580.7 5779.1 5518.8 4852.1 TRUE FALSE 5897.825345 5217.021456 4953.580122 4683.74533 6310.31934 7266.264135 6141.71351 5728.573938 6092.499009 5453.214779 1.081531827 0.956687324 0.908377961 0.858896178 1.15717418 1.332473491 1.126255568 1.050494831 1.117230708 1 12.41289126 -6.275794074 24.85547457 1.143005523 0.948681797 0.448979471 0.096670397 671.4156669 1162569.044 0.031721186 0.036128883 5.30E-07 6.275794074 -0.194323726 EAASS(ph)PAGEPLRK ddPTM_A459_MK2206_30min_R2 1 EAASSPAGEPLRK 13 1 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 EAAS(0.004)S(0.996)PAGEPLRK 149.82 0.00091405 3698200 28451 27462 30381 32184 32071 29570 29162 23358 21616 28579 TRUE FALSE 30629.23044 26098.27701 31393.88738 29554.46425 30811.7314 30695.30707 25332.99437 26410.9708 23496.12061 27646.46957 1.107889395 0.944000352 1.135547788 1.069014044 1.114490634 1.110279452 0.916319326 0.955310794 0.849877795 1 14.75480764 -7.266638562 24.94194918 0.926652869 1.077578084 0.593526842 0.060687566 297.040976 1424982.261 0.024436275 0.017036452 5.41E-08 7.266638562 0.150925214 EAASSSSGTQPAPPAPAS(ph)PWDSKK ddPTM_A459_MK2206_30min_R1 4 EAASSSSGTQPAPPAPASPWDSKK 24 1 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 EAASSSS(0.001)GT(0.042)QPAPPAPAS(0.943)PWDS(0.013)KK;EAASSSSGTQPAPPAPAS(0.992)PWDS(0.008)KK;EAASSSSGTQPAPPAPAS(1)PWDSKK;EAASSSSGTQPAPPAPAS(0.997)PWDS(0.003)KK 174.77 3.81E-17 114107000 16808.2 17014.1 17199.4 15782.2 13335 12772.5 14898.7 15551.6 15135.8 12880.2 TRUE FALSE 15378.57433 15906.479 16031.95265 16997.74778 12803.83871 13495.66791 13904.83491 15415.634 16709.22057 14475.89642 1.062357307 1.098825146 1.10749291 1.174210376 0.884493668 0.932285471 0.960550871 1.064917402 1.154278816 1 13.82136507 -6.245450971 24.99945474 0.997366614 1.109641087 0.354634928 0.073518229 1036.070392 1619998.146 0.023826954 0.030659775 5.68E-07 6.245450971 0.112274473 EAASSSSGTQPAPPAPAS(ph)PWDSKK ddPTM_A459_MK2206_30min_R2 2 EAASSSSGTQPAPPAPASPWDSKK 24 1 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 EAASSSSGTQPAPPAPAS(0.986)PWDS(0.014)KK;EAASSSSGTQPAPPAPAS(0.994)PWDS(0.006)KK 148.69 7.36E-10 195739000 229020 230210 224080 216640 214870 164721 242220 187295 168972 219180 TRUE FALSE 246553.9473 218778.1062 231550.7154 198939.819 206433.1242 170989.5731 210416.223 211775.0996 183668.8791 212028.1745 1.162835778 1.031835069 1.09207522 0.938270678 0.97361176 0.806447414 0.992397466 0.998806409 0.866247514 1 17.69389646 -5.762308968 24.3335813 0.937441927 1.089207369 0.543178935 0.065541836 12.54205833 350990.4021 0.01791522 0.028423503 1.73E-06 5.762308968 0.151765441 EAATQEDPEQLPELEAHGVS(ph)ESEGEERPVAEEEILLR ddPTM_A459_MK2206_30min_R1 3 EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR 37 1 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 EAATQEDPEQLPELEAHGVS(0.791)ES(0.209)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(0.908)ES(0.092)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(0.5)ES(0.5)EGEERPVAEEEILLR 66.426 1.57E-05 64780500 2835.78 3323.48 3428.03 3201.03 3821.39 3042.56 3965.16 3800.46 3059.93 2620.28 TRUE FALSE 2594.58202 3107.120848 3195.344875 3447.573885 3669.175944 3214.827118 3700.651411 3767.232979 3378.020674 2944.900069 0.881042466 1.055085326 1.085043567 1.170692996 1.245942429 1.091659154 1.256630556 1.279239666 1.147074806 1 11.52400296 -4.435490371 0.880961771 1.187196442 0.52991868 0.535180691 0.080931754 2.698891591 1.080219593 0.027198811 1.976475394 3.67E-05 4.435490371 -0.657277762 EAAVSASDILQES(ph)AIHSPGTVEK ddPTM_A459_MK2206_30min_R2 1 EAAVSASDILQESAIHSPGTVEK 23 0 F5H3K2;F5H8B7;E7ENF1;G5EA44;F5H7W8;Q96C57 F5H3K2 C12orf43 Uncharacterized protein C12orf43 1 EAAVSAS(0.002)DILQES(0.587)AIHS(0.319)PGT(0.092)VEK 53.957 0.014408 10085000 7092.3 9250.8 7209.8 10213 9030.9 10655 9391.2 7051.8 8005.7 9188.2 TRUE FALSE 7635.291941 8791.418724 7450.171134 9378.56523 8676.301489 11060.48349 8158.124159 7973.494472 8702.021315 8888.389786 0.859018576 0.989090143 0.838191316 1.055147834 0.976138727 1.244374263 0.917840504 0.897068498 0.97903237 1 13.11770637 -5.768675984 24.99898573 1.010176191 0.904799021 0.224776318 0.096984489 276.4617956 955045.2201 0.028360223 0.043056812 1.70E-06 5.768675984 -0.10537717 EAAVSASDILQESAIHS(ph)PGTVEK ddPTM_A459_MK2206_30min_R1 2 EAAVSASDILQESAIHSPGTVEK 23 0 F5H3K2;F5H8B7;E7ENF1;G5EA44;F5H7W8;Q96C57 F5H3K2 C12orf43 Uncharacterized protein C12orf43 1 EAAVSASDILQESAIHS(1)PGTVEK;EAAVSASDILQES(0.001)AIHS(0.643)PGT(0.356)VEK 240.8 2.41E-37 188733000 6972.6 6114.2 6489 4960.31 7034.5 6734.1 6958.4 6077.9 5227.34 5161.93 TRUE FALSE 6379.543755 5716.164469 6048.544759 5342.353936 6754.300969 7115.378923 6494.217832 6024.761561 5770.740699 5801.428859 1.099650433 0.985302864 1.042595696 0.920868646 1.164247832 1.226487318 1.119416956 1.038496155 0.994710241 1 12.50219256 -4.459274249 21.60415513 1.06098361 2.014768862 0.018932942 0.087054105 652.7975712 602504.2791 0.022937011 51032.18067 3.47E-05 4.459274249 0.953785251 EAAVSASDILQESAIHS(ph)PGTVEK ddPTM_A459_MK2206_30min_R2 3 EAAVSASDILQESAIHSPGTVEK 23 0 F5H3K2;F5H8B7;E7ENF1;G5EA44;F5H7W8;Q96C57 F5H3K2 C12orf43 Uncharacterized protein C12orf43 1 EAAVSASDILQES(0.002)AIHS(0.628)PGT(0.37)VEK;EAAVSASDILQESAIHS(0.998)PGT(0.002)VEK;EAAVSASDILQESAIHS(0.992)PGT(0.008)VEK 174.55 2.32E-13 210035000 152709.1 175791 156694 195805 174168 166760 208877 148498 144116 165212 TRUE FALSE 164400.6261 167061.4746 161918.0998 179807.1052 167329.2892 173106.1687 181451.199 167907.1985 156650.9492 159821.146 1.028653781 1.045302695 1.013120628 1.125052033 1.046978409 1.083124311 1.135339119 1.050594384 0.980164097 1 17.28609878 -8.169667374 4.81930962 0.990588643 1.068630637 0.404443434 0.037195297 0.219156918 8.243992741 0.028315398 0.009965887 6.77E-09 8.169667374 0.078041994 EAAYHPEVAPDVR ddPTM_A459_MK2206_30min_R2 1 EAAYHPEVAPDVR 13 0 Q9Y490 Q9Y490 TLN1 Talin-1 0 107.99 0.009031 5231300 31118 40914 43056 46532 48474 44341 41710 36426 40307 40571 FALSE TRUE 33500.41801 38882.27025 44491.46555 42730.18675 46570.6672 46028.42783 36233.4269 41187.00327 43812.83 39247.17159 0.853575344 0.990702481 1.133622214 1.088745635 1.186599322 1.17278331 0.923211162 1.049426025 1.11633089 1 15.26030107 -4.903289351 2.907064769 1.086574178 0.841545745 0.47196418 0.075264968 0.290582282 4.139332998 0.020597656 0.147664145 1.25E-05 4.903289351 -0.245028432 EADDDEEVDDNIPEMPS(ph)PK ddPTM_A459_MK2206_30min_R1 2 EADDDEEVDDNIPEMPSPK 19 0 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 EADDDEEVDDNIPEMPS(1)PK;EADDDEEVDDNIPEMPS(1)PK 163.34 4.66E-07 63609000 4340 5976.5 5702.3 6007.8 3166 3196.7 3527.9 3371.6 4299.5 3126.9 TRUE FALSE 3970.86021 5587.428764 5315.243764 6470.521797 3039.891516 3377.694391 3292.560228 3342.122457 4746.448411 3514.283979 1.12992013 1.589919539 1.512468484 1.841206299 0.865010208 0.961133025 0.936907845 0.951010925 1.350616068 1 11.77901506 -6.274037183 24.99693131 1.002154288 1.523066536 0.601601596 0.202275312 515.6046761 1023075.705 0.062613686 0.071469394 5.32E-07 6.274037183 0.520912248 EADDDEEVDDNIPEMPS(ph)PK ddPTM_A459_MK2206_30min_R2 2 EADDDEEVDDNIPEMPSPK 19 0 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 EADDDEEVDDNIPEMPS(1)PK;EADDDEEVDDNIPEMPS(1)PK 140.68 7.60E-05 3427900 79941 68151 66138 64696 66334 45341 96304 67766 42819 75251 TRUE FALSE 86061.34442 64766.72044 68343.00791 59410.12985 63729.39386 47066.48353 83659.16912 76623.24888 46543.31922 72795.56603 1.18223333 0.889706942 0.938834762 0.816122919 0.875457083 0.64655701 1.149234406 1.052581264 0.63937025 1 16.15156296 -4.761314519 23.63420139 0.89069939 1.182233786 0.246048634 0.153582726 2.207983476 414450.6317 0.037902348 0.212561139 1.73E-05 4.761314519 0.291534396 EADDDEEVDDNIPEMPS(ph)PKK ddPTM_A459_MK2206_30min_R1 2 EADDDEEVDDNIPEMPSPKK 20 1 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 EADDDEEVDDNIPEMPS(1)PKK;EADDDEEVDDNIPEMPS(1)PKK 156.17 8.74E-07 19168100 4595.6 5448.8 5365.9 6375 3498.2 3281.6 2862 3503.4 3167.7 1731.62 TRUE FALSE 4204.720088 5094.08213 5001.677658 6866.003605 3358.859286 3467.401356 2671.081202 3472.770143 3496.993751 1946.146159 2.160536643 2.617522896 2.57004215 3.527999978 1.725902894 1.781675719 1.372497739 1.784434395 1.796881357 1 10.92640435 -6.411883319 8.105464098 1.6036736 2.699769178 0.673648277 0.389962846 0.183629355 12.14136571 0.120166167 0.136177079 3.87E-07 6.411883319 1.096095578 EADDDEEVDDNIPEMPS(ph)PKK ddPTM_A459_MK2206_30min_R2 2 EADDDEEVDDNIPEMPSPKK 20 1 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 EADDDEEVDDNIPEMPS(1)PKK;EADDDEEVDDNIPEMPS(1)PKK 140.28 3.54E-05 7884300 18276.7 36137 22028.8 29622 30557 21535.2 40991 26493 20551.1 26322 TRUE FALSE 19675.9782 34342.48913 22763.2292 27201.78784 29357.17864 22354.73713 35608.83246 29955.72606 22338.59753 25463.1153 0.772724703 1.348715141 0.893968744 1.068282004 1.152929573 0.877926242 1.398447599 1.176436022 0.8772924 1 14.63612132 -5.994585094 24.93523825 1.096505326 1.02976599 0.020372913 0.198021672 749.9165217 3453251.487 0.054354952 0.080305514 1.01E-06 5.994585094 -0.066739336 EADDIVNWLK ddPTM_A459_MK2206_30min_R2 1 EADDIVNWLK 10 0 P07237;I3L312;I3L3P5 P07237 P4HB Protein disulfide-isomerase 0 147.4 0.01144 4258000 29142 31627 29521 31734 28120 29888 33700 25718 30761 25101 FALSE TRUE 31373.13393 30056.44917 30505.21541 29141.23069 27015.86751 31025.40878 29275.14952 29079.4309 33436.53618 24281.95643 1.29203485 1.237810028 1.256291498 1.200118729 1.112590231 1.27771454 1.205633887 1.197573638 1.377011621 1 14.56759705 -11.49367365 3.041886097 0.809274427 1.234060871 0.53736485 0.066525481 25345435.5 434282.92 33856393.94 0.015939208 3.21E-12 11.49367365 0.424786444 EADIDGDGQVNYEEFVQMMTAK ddPTM_A459_MK2206_30min_R1 1 EADIDGDGQVNYEEFVQMMTAK 22 0 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;M0QZ52 P0DP25 CALM2;CALM3 0 81.807 0.019952 4268400 1004.2 1043.4 935.63 1010 1197 964.12 959.59 1293 1016.7 882.75 FALSE TRUE 918.7875167 975.4744704 872.1220424 1087.790375 1149.320955 1018.707641 895.577502 1281.695437 1122.389603 992.1117344 0.926092783 0.983230453 0.879056272 1.09643938 1.158459189 1.02680737 0.902698225 1.291886179 1.131313706 1 9.9543588 -5.773224795 24.91324511 1.091777658 0.934836902 0.340924754 0.099999937 241.6359112 510795.289 0.029232307 0.04375577 1.69E-06 5.773224795 -0.156940757 EADLVFISVNT(ph)PTK ddPTM_A459_MK2206_30min_R1 4 EADLVFISVNTPTK 14 0 O60701;E7ER83;E7ETF4;E7EV97 O60701 UGDH UDP-glucose 6-dehydrogenase 1 EADLVFIS(0.01)VNT(0.952)PT(0.038)K;EADLVFIS(0.133)VNT(0.843)PT(0.024)K;EADLVFIS(0.237)VNT(0.76)PT(0.004)K;EADLVFIS(0.068)VNT(0.759)PT(0.174)K 216.01 3.23E-08 137592000 27813.4 27307.8 29565.6 22131.5 23409.9 21364.4 26064 22517 26488.5 24837.1 TRUE FALSE 25447.72428 25530.05726 27558.76945 23836.07196 22477.43411 22574.03387 24325.31812 22320.13624 29242.07437 27914.10746 0.911643846 0.914593357 0.987270307 0.853907724 0.805235637 0.808696244 0.871434566 0.79960057 1.047573325 1 14.76870681 -8.272320656 24.93666737 1.023786691 0.869942819 0.546580018 0.056369804 657.3820997 1506508.394 0.05794501 0.015572834 5.34E-09 8.272320656 -0.153843872 EADLVFISVNT(ph)PTK ddPTM_A459_MK2206_30min_R2 2 EADLVFISVNTPTK 14 0 O60701;E7ER83;E7ETF4;E7EV97 O60701 UGDH UDP-glucose 6-dehydrogenase 1 EADLVFIS(0.054)VNT(0.946)PTK;EADLVFIS(0.073)VNT(0.835)PT(0.092)K 198.61 0.00021388 78039000 322810 360050 334760 308350 328540 304520 395940 303240 292700 350290 TRUE FALSE 347524.5818 342170.4406 345920.7313 283156.8186 315639.8688 316108.722 343952.6024 342874.5092 318158.5169 338860.066 1.025569598 1.009769149 1.020836522 0.835615781 0.931475557 0.932859176 1.015028435 1.011846906 0.938908266 1 18.3703301 -10.2755228 15.16904915 0.999999954 0.968328226 0.025282616 0.057376067 0 0 0.059630559 0.014462535 5.30E-11 10.2755228 -0.031671727 EADPES(ph)EADR ddPTM_A459_MK2206_30min_R2 2 EADPESEADR 10 0 F8W785;O00461 F8W785 GOLIM4 Golgi integral membrane protein 4 1 EADPES(1)EADR;EADPES(1)EADR 108.98 0.010346 2024580 25736 17383.1 18028.4 17008.5 18079.9 18286.3 26390 17858.5 21636.1 20955 TRUE FALSE 27706.36795 16519.88053 18629.45786 15618.85114 17369.99228 18982.19796 22924.9613 20192.66727 23517.96887 20271.24007 1.366782094 0.814941783 0.919009286 0.770493127 0.856878623 0.936410298 1.130910651 0.996123927 1.160164291 1 14.30714673 -7.197284064 7.705691536 1.071293107 0.924777597 0.125158524 0.160677539 0.573480068 62.33299226 0.060956563 0.047077885 6.35E-08 7.197284064 -0.146515509 EADQPTTEPGMVLDSVEAGDT(ph)TPPTK ddPTM_A459_MK2206_30min_R2 1 EADQPTTEPGMVLDSVEAGDTTPPTK 26 0 A0A0J9YVR0;A0A0J9YWV8 A0A0J9YVR0 1 EADQPTTEPGMVLDS(0.132)VEAGDT(0.412)T(0.412)PPT(0.043)K 53.705 0.018189 2114700 10150 13015 10589 12130 14396 11827 12010 12406 10760 10262 TRUE FALSE 10927.0918 12368.69403 10942.03197 11138.9402 13830.74071 12277.08477 10433.07257 14027.5068 11695.88535 9927.15178 1.100727786 1.245945897 1.102232767 1.122068086 1.393223455 1.236717746 1.050963338 1.413044457 1.178171303 1 13.27716414 -4.74626521 24.15998562 1.204542212 1.100727372 0.038882844 0.128534801 1842.509082 2933349.241 0.031046952 0.68114981 1.79E-05 4.74626521 -0.103814841 EADQPTTEPGMVLDSVEAGDT(ph)TPPTKR ddPTM_A459_MK2206_30min_R1 1 EADQPTTEPGMVLDSVEAGDTTPPTKR 27 1 A0A0J9YVR0;A0A0J9YWV8 A0A0J9YVR0 1 EADQPTTEPGMVLDS(0.01)VEAGDT(0.743)T(0.218)PPT(0.028)KR 84.47 8.51E-05 12650000 2964.4 2935.1 2979.1 2790.3 3252.4 2947.8 2991.5 2912.6 2802.2 2659.3 TRUE FALSE 2712.262213 2744.024457 2776.886992 3005.209389 3122.850021 3114.701889 2791.942493 2887.135445 3093.498718 2988.754161 0.90748923 0.918116482 0.929111878 1.005505715 1.044866808 1.042140545 0.934149262 0.965999641 1.035046227 1 11.54532852 -5.712984526 4.602535896 1.003125561 0.915772337 0.595527761 0.03248749 0.156482984 7.029430417 0.009975058 0.017285786 1.94E-06 5.712984526 -0.087353223 EADQPTTEPGMVLDSVEAGDT(ph)TPPTKR ddPTM_A459_MK2206_30min_R2 1 EADQPTTEPGMVLDSVEAGDTTPPTKR 27 1 A0A0J9YVR0;A0A0J9YWV8 A0A0J9YVR0 1 EADQPTTEPGMVLDS(0.028)VEAGDT(0.818)T(0.12)PPT(0.035)KR 83.465 9.51E-05 5118800 14267 18990 16366 19146 19714 15968 16850 18401 16817 17857 TRUE FALSE 15359.29249 18046.98421 16911.63427 17581.71055 18939.92931 16575.67343 14637.57476 20806.07388 18279.71226 17274.32755 0.88913982 1.04472861 0.979003913 1.017794209 1.096420642 0.959555351 0.847360033 1.204450582 1.058201091 1 14.07634193 -7.771232185 24.99999909 1.098494314 0.984596548 0.268939771 0.082691133 276.9876406 707108.2688 0.044189502 0.021640243 1.69E-08 7.771232185 -0.113897766 EAEAAIYHLQLFEELRR ddPTM_A459_MK2206_30min_R1 2 EAEAAIYHLQLFEELRR 17 1 P14618;P14618-3;B4DNK4 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 132.51 0.00047333 43673000 11550.6 11452.9 13208 11098.2 13876 11426 13002.2 13244.5 10014.2 8679.6 FALSE TRUE 10568.16082 10707.31413 12311.47776 11952.98529 13323.28954 12072.93025 12134.84696 13128.70473 11055.21193 9754.894376 1.083370092 1.097635066 1.262082119 1.225332108 1.365805618 1.237627983 1.243975229 1.345858215 1.133298988 1 13.25191054 -5.254981491 21.23212457 1.245019292 1.090502344 0.215994748 0.099050441 76.78760026 252442.1148 0.023552896 0.058678427 5.56E-06 5.254981491 -0.154516948 EAEALLQSMGLTPESPIVPPPMS(ph)PSSK ddPTM_A459_MK2206_30min_R1 4 EAEALLQSMGLTPESPIVPPPMSPSSK 27 0 E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E9PGG1;E7ETL8 E7EQL5 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 EAEALLQSMGLTPESPIVPPPMS(0.706)PS(0.123)S(0.171)K;EAEALLQSMGLTPES(0.001)PIVPPPMS(0.796)PS(0.151)S(0.051)K;EAEALLQSMGLTPESPIVPPPMS(0.683)PS(0.112)S(0.205)K;EAEALLQSMGLTPESPIVPPPMS(0.621)PS(0.148)S(0.231)K 222.78 5.12E-45 254440000 23792.1 22479.04 22885.82 19701.5 21617.28 18726.16 19471.45 19108.3 18183.45 16622 TRUE FALSE 21768.45696 21015.65041 21332.3943 21218.91294 20756.21796 19786.419 18172.5451 18941.23815 20073.6847 18681.25885 1.165256428 1.124959007 1.141914176 1.135839566 1.111071696 1.059158762 0.972768765 1.013916583 1.074535975 1 14.18930405 -6.792883165 2.37315483 1.016215542 1.139514988 0.828787262 0.026148902 0.118047278 1.363122538 0.01029067 0.009323573 1.61E-07 6.792883165 0.123299446 EAEALLQSMGLTPESPIVPPPMS(ph)PSSK ddPTM_A459_MK2206_30min_R2 6 EAEALLQSMGLTPESPIVPPPMSPSSK 27 0 E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E9PGG1;E7ETL8 E7EQL5 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 EAEALLQSMGLTPESPIVPPPMS(0.697)PS(0.135)S(0.168)K;EAEALLQSMGLTPES(0.026)PIVPPPMS(0.672)PS(0.151)S(0.151)K;EAEALLQSMGLTPES(0.001)PIVPPPMS(0.789)PS(0.105)S(0.105)K;EAEALLQSMGLTPESPIVPPPMS(0.68)PS(0.16)S(0.16)K;EAEALLQSMGLTPES(0.001)PIVPPPMS(0.58)PS(0.21)S(0.21)K;EAEALLQSMGLTPES(0.003)PIVPPPMS(0.577)PS(0.181)S(0.239)K 114.76 5.66E-12 74596000 195671 237042 200576 242048 216669 182129 205600 153602 198292 185965 TRUE FALSE 210651.7222 225270.839 207263.1037 222271.9041 208161.4864 189060.0467 178604.473 173678.3088 215539.0797 179896.9773 1.170957541 1.252221368 1.152121102 1.235551078 1.157114975 1.050935094 0.992815309 0.965432057 1.198125077 1 17.45681142 -6.694275854 3.208024669 1.034220228 1.202258301 0.587184224 0.064609557 0.169448661 3.522062522 0.022367634 0.02164949 2.02E-07 6.694275854 0.168038073 EAEAYT(ph)GLSPPVPSFNCEVR ddPTM_A459_MK2206_30min_R1 1 EAEAYTGLSPPVPSFNCEVR 20 0 O43164-2;O43164 O43164-2 PJA2 E3 ubiquitin-protein ligase Praja-2 1 EAEAYT(0.683)GLS(0.317)PPVPSFNCEVR 167.35 7.13E-09 3848600 1240.1 1302.3 1308 756.25 1135.5 1263.4 1738.4 1172.1 1532.6 1790.7 TRUE FALSE 1134.622983 1217.520033 1219.216604 814.496506 1090.270631 1334.932616 1622.434508 1161.852453 1691.919254 2012.545435 0.56377509 0.604965241 0.605808238 0.404709624 0.541737151 0.66330558 0.806160437 0.577304956 0.84068624 1 10.97480564 -8.403911032 0.511774511 1.008623141 0.541175387 0.705412573 0.089322502 0.566892427 0.372975357 0.106268601 0.053301211 3.95E-09 8.403911032 -0.467447753 EAEAYTGLS(ph)PPVPSFNCEVR ddPTM_A459_MK2206_30min_R2 1 EAEAYTGLSPPVPSFNCEVR 20 0 O43164-2;O43164 O43164-2 PJA2 E3 ubiquitin-protein ligase Praja-2 1 EAEAYT(0.324)GLS(0.674)PPVPS(0.002)FNCEVR 216.53 2.53E-19 3626100 13822 11256 8539 14219 12270 10660 10585 11712 11589 13665 TRUE FALSE 14880.22295 10697.04341 8823.685998 13057.26222 11788.21815 11065.67377 9195.176785 13242.79861 12596.99027 13219.11217 1.125659784 0.809210427 0.667494601 0.987756367 0.891755664 0.837096594 0.695597153 1.001791833 0.952937694 1 13.69033766 EAEDS(ph)DSDDNIKR ddPTM_A459_MK2206_30min_R2 1 EAEDSDSDDNIKR 13 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 EAEDS(0.996)DS(0.004)DDNIKR 73.833 0.026008 9714000 25662 38154 28129 28552 30607 26981 30577 29071 25683 32417 TRUE FALSE 27626.70245 36259.32784 29066.80682 26219.21027 29405.21539 28007.78086 26562.20317 32870.67952 27916.86092 31359.23594 0.880974986 1.156256737 0.9268978 0.836092127 0.937689153 0.893127017 0.847029667 1.048197717 0.890227714 1 14.93660279 -5.482860693 24.99534536 0.917158566 1.024356265 0.162745544 0.086720245 756.7940478 472693.6127 0.0214306 0.044601857 3.29E-06 5.482860693 0.107197699 EAEDSLRR ddPTM_A459_MK2206_30min_R1 2 EAEDSLRR 8 1 O43776;K7EMQ6;K7EJ19;K7EIU7;K7EPK2;O43776-2 O43776 NARS "Asparagine--tRNA ligase, cytoplasmic" 0 ; 116.9 0.012343 14840800 6274.4 5553.5 5283.7 4949.1 6081.2 5243.4 6372.8 5990.9 1306.04 3549.3 FALSE TRUE 5740.729332 5191.966141 4925.057165 5330.28054 5838.972927 5540.276777 5947.68214 5938.522193 1441.807532 3989.01408 1.439134888 1.301566261 1.234655247 1.336240092 1.463763429 1.388883736 1.491015579 1.488719286 0.361444583 1 11.9618165 -8.250324863 24.98774053 0.680722281 1.388268682 0.752703754 0.16328885 282.1294821 634289.2599 0.106673352 0.039495396 5.62E-09 8.250324863 0.707546401 EAEDSLRR ddPTM_A459_MK2206_30min_R2 2 EAEDSLRR 8 1 O43776;K7EMQ6;K7EJ19;K7EIU7;K7EPK2;O43776-2 O43776 NARS "Asparagine--tRNA ligase, cytoplasmic" 0 ; 123.69 0.0078313 26280000 97247 173294 125273 163642 149632 157945 145765 119294 133540 123472 FALSE TRUE 104692.3051 164688.472 129449.5393 150271.9251 143756.6958 163955.7077 126625.8804 134886.1354 145155.0678 119443.1188 0.876503445 1.37880251 1.083775613 1.258104499 1.203557788 1.372667671 1.060135416 1.129291807 1.215265219 1 16.86596422 -10.16481205 0.626204655 0.973896223 1.186568123 0.114454009 0.142816224 32.18677967 8.955442017 1.963309438 0.052715197 6.84E-11 10.16481205 0.2126719 EAEEGEDDRDS(ph)ANGEDDS ddPTM_A459_MK2206_30min_R1 2 EAEEGEDDRDSANGEDDS 18 1 G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;G3V2D6;P07910-3 G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(0.999)ANGEDDS(0.001) 151.31 0.00058317 186153500 7215.2 6798.6 6941.8 4344.02 6206.7 6105.9 10131.8 6316.4 9656.5 14231.6 TRUE FALSE 6601.509351 6356.009904 6470.609957 4678.597173 5959.473996 6451.610781 9455.926109 6261.176381 10660.32773 15994.71805 0.412730586 0.397381803 0.404546672 0.292508887 0.372590125 0.403358831 0.591190547 0.391452751 0.666490506 1 13.96530794 -8.872374829 0.623875007 1.014795041 0.374635742 0.877025714 0.069540338 0.429807628 0.324787123 0.079416927 0.028890022 1.34E-09 8.872374829 -0.640159298 down EAEEGEDDRDS(ph)ANGEDDS ddPTM_A459_MK2206_30min_R2 1 EAEEGEDDRDSANGEDDS 18 1 G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;G3V2D6;P07910-3 G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 EAEEGEDDRDS(0.892)ANGEDDS(0.108) 94.387 0.020206 3747900 10893 4006.5 5812.8 7254.5 4409.8 3892.9 6844.4 5076.1 4087 9633.1 TRUE FALSE 11726.97646 3807.543036 6006.595851 6661.784144 4236.649095 4041.047037 5945.722058 5739.563699 4442.479872 9318.772736 1.258424987 0.408588464 0.644569411 0.714877842 0.45463595 0.433645841 0.638037028 0.615914119 0.476723706 1 13.18592425 -10.39605401 11.90899623 0.999996531 0.613132467 0.184103874 0.233699167 0 0 0.214914705 0.052124472 4.02E-11 10.39605401 -0.386864064 EAEEGEDDRDSANGEDDS ddPTM_A459_MK2206_30min_R1 2 EAEEGEDDRDSANGEDDS 18 1 G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;G3V2D6;P07910-3 G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 ; 142.39 0.014265 3256100 626.67 772.62 552.9 363.64 640.11 667.49 967.84 629.78 959.03 1379.23 FALSE TRUE 573.3684257 722.3222976 515.3706885 391.6476158 614.6130632 705.282707 903.2771595 624.2738999 1058.7246 1550.099425 0.369891387 0.465984495 0.332475892 0.252659674 0.396499123 0.454991916 0.582722079 0.402731521 0.683004318 1 10.59814504 -8.854069605 0.526413684 1.025653848 0.359581543 0.852486906 0.078665994 0.553859126 0.312010617 0.110207316 0.041447998 1.40E-09 8.854069605 -0.666072306 down EAEFGQGTGPIWLNEVK ddPTM_A459_MK2206_30min_R1 1 EAEFGQGTGPIWLNEVK 17 0 H0YGZ7;F5GZZ9;C9JHR8;Q86VB7-3;Q86VB7-4;Q86VB7;Q86VB7-2 H0YGZ7 CD163 Scavenger receptor cysteine-rich type 1 protein M130;Soluble CD163 0 60.968 0.032702 14589000 4213.6 4257.5 4831.8 4054.4 4897.7 4201.4 4778.7 4814.2 3586.6 3045.6 FALSE TRUE 3855.211194 3980.335976 4503.830878 4366.670591 4702.614238 4439.279637 4459.921642 4772.109957 3959.439905 3422.911921 1.126295763 1.162850832 1.315789299 1.27571807 1.373863642 1.296930724 1.302961264 1.394166741 1.156746068 1 11.74100845 -5.162300831 4.611314691 1.285300762 1.135624254 0.142975225 0.109270983 0.318394375 11.06887132 0.02593494 0.074958117 6.88E-06 5.162300831 -0.149676507 EAEFS(ph)DPENTR ddPTM_A459_MK2206_30min_R1 2 EAEFSDPENTR 11 0 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 EAEFS(1)DPENTR;EAEFS(1)DPENTR 152.38 0.00057931 31244000 10504.1 9761.9 10947.4 9089.2 10722.2 9770 10706.8 9830.6 8162.3 7669.4 TRUE FALSE 9610.671136 9126.398536 10204.32099 9789.251759 10295.11207 10323.16896 9992.568908 9744.652101 9010.800294 8619.543173 1.114986136 1.058803042 1.183858678 1.135704244 1.194391845 1.197646876 1.15929217 1.130529995 1.045391863 1 13.07339569 -8.341783294 2.406452562 1.001500072 1.150216048 0.629414988 0.03909178 0.196144414 2.159816243 0.04047013 0.011333092 4.55E-09 8.341783294 0.148715976 EAEFS(ph)DPENTR ddPTM_A459_MK2206_30min_R2 2 EAEFSDPENTR 11 0 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 EAEFS(1)DPENTR;EAEFS(1)DPENTR 136.01 0.0014504 76906000 148471 181977 149266 184924 176490 175162 175511 143290 133666 153032 TRUE FALSE 159838.0539 172940.2868 154242.4539 169815.1177 169560.1158 181827.9127 152466.1949 162018.495 145292.0271 148038.5784 1.07970541 1.16821094 1.041907154 1.147100435 1.145377899 1.228246817 1.029908532 1.09443428 0.981447057 1 17.17561366 -7.912728683 1.540530645 0.994756513 1.12997738 0.462485043 0.055576225 0.368198006 1.588009119 0.04693675 0.016461869 1.22E-08 7.912728683 0.135220867 EAEGGRPPAAT(ph)SPAEVVWSSEK ddPTM_A459_MK2206_30min_R1 1 EAEGGRPPAATSPAEVVWSSEK 22 1 O75564;O75564-2 O75564 JRK Jerky protein homolog 1 EAEGGRPPAAT(0.499)S(0.499)PAEVVWS(0.001)SEK 53.751 0.040801 5154200 1116.2 1134.4 1131.3 1184.5 1030 1143.1 970.2 1055.8 1046.1 672.92 TRUE FALSE 1021.261329 1060.550354 1054.510508 1275.730395 988.9729189 1207.821334 905.4797282 1046.569252 1154.845839 756.2864099 1.350363189 1.402313118 1.39432693 1.686835012 1.307669827 1.597042229 1.197270923 1.383826601 1.52699536 1 9.562788884 -11.45303971 2.558745203 0.717257937 1.426741595 0.473426473 0.135225518 8301338.907 4450754.416 14028849.45 0.032743677 3.52E-12 11.45303971 0.709483658 EAENQGLDIS(ph)SPGMSGHR ddPTM_A459_MK2206_30min_R2 1 EAENQGLDISSPGMSGHR 18 0 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 EAENQGLDIS(0.897)S(0.103)PGMSGHR 120.33 0.00063226 19522000 30812 33821 38338 49509 41847 49408 49123 39167 33589 37671 TRUE FALSE 33170.99041 32141.49832 39616.16979 45463.95633 40203.87652 51288.25606 42673.09109 44286.26138 36510.5105 36441.79836 0.910245704 0.881995395 1.08710798 1.247577188 1.10323525 1.407401895 1.170993009 1.215260041 1.001885531 1 15.15330654 -5.39856833 3.392225128 1.18045046 0.894750586 0.457082841 0.113641316 0.195347215 4.102590091 0.030065504 0.070164718 3.99E-06 5.39856833 -0.285699874 EAENQGLDISS(ph)PGMSGHR ddPTM_A459_MK2206_30min_R1 4 EAENQGLDISSPGMSGHR 18 0 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 EAENQGLDIS(0.064)S(0.936)PGMSGHR;EAENQGLDIS(0.03)S(0.97)PGMSGHR;EAENQGLDIS(0.318)S(0.682)PGMSGHR;EAENQGLDIS(0.381)S(0.619)PGMSGHR 241.11 4.23E-25 25312100 8350.8 6824.5 7568.4 5433.16 9616.42 9264.7 9986.1 7647.31 7047.84 7038.91 TRUE FALSE 7640.520608 6380.22381 7054.678095 5851.622925 9233.377628 9789.259308 9319.94549 7580.450375 7780.488189 7910.943312 0.96581663 0.806506071 0.891761932 0.739687126 1.167165187 1.23743262 1.178107986 0.958223321 0.983509536 1 12.94963402 -6.267295751 24.99802738 1.097353998 0.850684518 0.567000288 0.101008651 371.8532887 1587259.804 0.033532747 0.039041895 5.40E-07 6.267295751 -0.246669479 EAENQGLDISS(ph)PGMSGHR ddPTM_A459_MK2206_30min_R2 1 EAENQGLDISSPGMSGHR 18 0 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 EAENQGLDIS(0.047)S(0.953)PGMSGHR 196.1 1.82E-10 18720000 46078 66736 43143 73206 51643 76042 75497 57867 53156 63148 TRUE FALSE 49605.76711 63421.98728 44581.36609 67224.83563 49615.23633 78935.8316 65584.15321 65430.41559 57779.4128 61087.48593 0.812044666 1.038215705 0.729795398 1.100468199 0.812199677 1.292176792 1.073610286 1.071093606 0.945846959 1 15.89858925 -6.733367386 24.99968779 1.080805723 0.908147258 0.311664908 0.131804262 269.2717088 239800.9879 0.041483134 0.04147476 1.85E-07 6.733367386 -0.172658464 EAESCDCLQGFQLTHSLGGGTGSGMGTLLLSK ddPTM_A459_MK2206_30min_R1 2 EAESCDCLQGFQLTHSLGGGTGSGMGTLLLSK 32 0 Q3ZCM7;A0A075B736;Q5SQY0 Q3ZCM7 TUBB8 Tubulin beta-8 chain 0 ; 158.8 1.42E-23 13224800 1291.72 1541.97 1426.49 1588.94 1409.79 1555.7 1567.28 1626.84 1022.02 1236.57 FALSE TRUE 1181.852431 1441.587473 1329.663833 1711.320434 1353.635079 1643.78239 1462.729611 1612.616709 1128.262636 1389.765627 0.850396936 1.037288191 0.956754007 1.231373406 0.974002416 1.182776691 1.052500927 1.160351557 0.811836625 1 10.44062589 -4.093487554 1.3248479 1.062193619 0.068525864 0.191057507 0.117446041 10.65862963 4.431129043 0.031895592 22.32377383 8.06E-05 4.093487554 -0.993667756 EAETKS(ph)PLVSPSK ddPTM_A459_MK2206_30min_R1 1 EAETKSPLVSPSK 13 1 P35612 P35612 ADD2 Beta-adducin 1 EAET(0.062)KS(0.937)PLVS(0.001)PSK 164.66 0.0017215 11231000 1740.7 1835.9 2180.4 1743.7 1419.1 1224.5 2136.4 1775.5 1908.5 1564.9 TRUE FALSE 1592.644324 1716.382576 2032.400523 1878.000076 1362.574242 1293.830132 1993.884654 1759.976991 2106.895405 1758.771626 0.905543563 0.975898491 1.155579549 1.067790751 0.774730625 0.735644192 1.133680248 1.000685344 1.197935748 1 10.78035245 EAETKS(ph)PLVSPSK ddPTM_A459_MK2206_30min_R2 1 EAETKSPLVSPSK 13 1 P35612 P35612 ADD2 Beta-adducin 1 EAET(0.269)KS(0.731)PLVSPSK 196.8 0.00086452 5085800 30284 30771 32830 30844 26640 26885 36499 22840 24647 34279 TRUE FALSE 32602.56632 29242.95689 33924.53581 28323.94653 25593.97974 27908.12751 31706.63746 25825.26642 26790.75151 33160.47904 0.983175372 0.881861714 1.023041186 0.854147689 0.771821774 0.841608093 0.956157401 0.778796542 0.807912077 1 15.01717723 -5.842345709 9.684407121 0.848888372 0.954465038 0.274822356 0.075987054 0.410755951 45.53501569 0.020904605 0.031063293 1.44E-06 5.842345709 0.105576667 EAETKSPLVS(ph)PSK ddPTM_A459_MK2206_30min_R1 2 EAETKSPLVSPSK 13 1 P35612 P35612 ADD2 Beta-adducin 1 EAET(0.076)KS(0.345)PLVS(0.579)PSK;EAETKS(0.003)PLVS(0.96)PS(0.037)K 155.39 0.0017354 13024700 4712.5 4993.4 4959.4 4555.7 3889.2 3447.6 3953.9 4260.9 4484.4 3986.3 TRUE FALSE 4311.677129 4668.328752 4622.769746 4906.580803 3734.284928 3642.800133 3690.142545 4223.647401 4950.569428 4480.152939 0.962395076 1.042002096 1.031833022 1.095181542 0.833517288 0.813097272 0.823664414 0.942746254 1.105000096 1 12.12933227 -6.258302197 24.99913567 0.906679196 1.033433594 0.272735292 0.089038054 368.3076427 2934917.246 0.028579971 0.035332712 5.52E-07 6.258302197 0.126754399 EAFAQRPS(ph)SAPDLMCLSPDR ddPTM_A459_MK2206_30min_R2 2 EAFAQRPSSAPDLMCLSPDR 20 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 EAFAQRPS(0.548)S(0.425)APDLMCLS(0.027)PDR;EAFAQRPS(0.588)S(0.325)APDLMCLS(0.087)PDR 71.651 0.0052354 15789200 14557.6 19694.1 16685.1 17254.7 17850.5 16496.1 17891.3 12419.5 15988.5 19186.8 TRUE FALSE 15672.14105 18716.11963 17241.37291 15844.93581 17149.59968 17123.87064 15542.15082 14042.77129 17379.15083 18560.73629 0.844370655 1.008371615 0.928916431 0.853680348 0.923971949 0.922585741 0.837367148 0.756584818 0.936339516 1 14.17996632 -7.248248637 23.76741693 0.862288273 0.916392302 0.011458629 0.073535811 929.8430852 1675416.311 0.027484772 0.021143563 5.65E-08 7.248248637 0.05410403 EAFAQRPSSAPDLMCLS(ph)PDR ddPTM_A459_MK2206_30min_R1 3 EAFAQRPSSAPDLMCLSPDR 20 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 EAFAQRPS(0.001)S(0.001)APDLMCLS(0.999)PDR;EAFAQRPS(0.001)S(0.001)APDLMCLS(0.998)PDR;EAFAQRPSSAPDLMCLS(1)PDR 115.96 0.00014783 19880400 3656.2 3792.2 3781.1 3047.92 3230.1 3360.07 3569.8 3271.78 2710.99 2624.53 TRUE FALSE 3345.220991 3545.327091 3524.449467 3282.671327 3101.438277 3550.31426 3331.665155 3243.175172 2992.807112 2949.676591 1.134097549 1.201937562 1.194859626 1.112891948 1.05145028 1.203628313 1.129501846 1.099501953 1.014622119 1 11.52634107 -8.134115117 1.925102986 0.997779369 1.14877826 0.616033813 0.043791322 0.245317361 1.618351911 0.042273912 0.013042382 7.34E-09 8.134115117 0.150998891 EAFAQRPSSAPDLMCLS(ph)PDR ddPTM_A459_MK2206_30min_R2 2 EAFAQRPSSAPDLMCLSPDR 20 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 EAFAQRPSSAPDLMCLS(1)PDR;EAFAQRPS(0.001)S(0.001)APDLMCLS(0.997)PDR 100.94 0.0004012 14126200 21531.1 20553 19714.8 19079 21353 24185 26592 18013.7 21006 23752 TRUE FALSE 23179.53757 19532.36791 20372.08159 17520.18467 20514.57393 25105.37712 23100.43846 20368.15244 22833.06391 22976.97419 1.00881593 0.850084426 0.886630303 0.762510526 0.892831831 1.092631994 1.005373391 0.886459299 0.993736761 1 14.4879012 -6.548665711 24.13785807 0.989550139 0.86976128 0.384059598 0.072898117 164.5297105 154006.2718 0.024714755 0.024715707 2.83E-07 6.548665711 -0.119788859 EAFEEMEGTSPS(ph)SPPPSGVR ddPTM_A459_MK2206_30min_R1 1 EAFEEMEGTSPSSPPPSGVR 20 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 EAFEEMEGT(0.05)S(0.246)PS(0.509)S(0.195)PPPSGVR 199.61 1.13E-15 4291900 1133.9 971 1038.5 791.35 1027.2 698.51 1092.9 838.06 829.41 1047.4 TRUE FALSE 1037.455851 907.7877235 968.0095134 852.2999141 986.2844489 738.0590326 1019.994635 830.7329298 915.6301376 1177.159819 0.881321154 0.771167779 0.822326329 0.724030756 0.837850929 0.626982862 0.866487811 0.705709553 0.777829928 1 10.20109449 -10.75837854 5.648028723 1.000010754 0.776343451 0.44260582 0.074234269 9.32E-06 1.26E-06 0.066626626 0.016158554 1.74E-11 10.75837854 -0.223667303 EAFEEMEGTSPS(ph)SPPPSGVR ddPTM_A459_MK2206_30min_R2 3 EAFEEMEGTSPSSPPPSGVR 20 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 EAFEEMEGT(0.003)S(0.014)PS(0.491)S(0.491)PPPS(0.002)GVR;EAFEEMEGT(0.006)S(0.021)PS(0.483)S(0.483)PPPS(0.008)GVR;EAFEEMEGT(0.021)S(0.077)PS(0.76)S(0.141)PPPSGVR 105.02 0.0014248 2706900 17629.6 22572.7 19063 20765.5 15740.4 19270.7 16806.7 15216.8 14343.8 16720.8 TRUE FALSE 18979.33573 21451.77254 19698.55091 19068.89222 15122.35281 20004.05999 14599.9601 17205.68801 15591.3978 16175.20167 1.173360068 1.326213607 1.217824131 1.178896722 0.934909692 1.236711628 0.902613791 1.063707789 0.963907475 1 13.98149608 -6.066478693 4.180902849 1.025643158 1.24300339 0.546587761 0.093158827 0.168432688 5.747333634 0.026688618 0.036189862 8.58E-07 6.066478693 0.217360232 EAFEEMEGTSPSS(ph)PPPSGVR ddPTM_A459_MK2206_30min_R1 1 EAFEEMEGTSPSSPPPSGVR 20 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 EAFEEMEGT(0.001)S(0.001)PS(0.024)S(0.974)PPPSGVR 240.66 3.96E-30 3162600 619.26 454.21 402.96 271.14 382.76 349.48 443.48 353.98 448.05 272.98 TRUE FALSE 566.5886851 424.6408464 375.6081979 292.0232498 367.5138587 369.2672556 413.8962584 350.8851902 494.6264009 306.7988233 1.84677594 1.38410194 1.224281742 0.951839537 1.197898528 1.203613663 1.349080332 1.143697966 1.612217399 1 8.261149139 -4.771700518 2.382882846 1.211747505 2.006328208 0.554195419 0.172344728 0.441284846 3.003394815 0.04457869 0.744712708 1.69E-05 4.771700518 0.794580703 EAFEQPQT(ph)SSTPPRDLDSK ddPTM_A459_MK2206_30min_R1 1 EAFEQPQTSSTPPRDLDSK 19 1 P52564;A0A0A0MRF7;K7EIW3 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 1 EAFEQPQT(0.725)S(0.143)S(0.094)T(0.02)PPRDLDS(0.018)K 92.289 0.0031616 18394000 3139.7 2801.4 2699 2441.4 2932.4 2408.1 3128.8 3139.8 2755.9 2638.8 TRUE FALSE 2872.652028 2619.028351 2515.7994 2629.437051 2815.596299 2544.444541 2920.083461 3112.34906 3042.385667 2965.714466 0.968620567 0.883101991 0.848294544 0.886611669 0.949382124 0.857953309 0.984613824 1.049443261 1.025852523 1 11.53416399 -7.449438848 4.460776731 1.027051269 0.89810407 0.713356994 0.036620494 0.117161093 4.377556516 0.016519965 0.010582535 3.55E-08 7.449438848 -0.128947199 EAFEQPQT(ph)SSTPPRDLDSK ddPTM_A459_MK2206_30min_R2 1 EAFEQPQTSSTPPRDLDSK 19 1 P52564;A0A0A0MRF7;K7EIW3 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 1 EAFEQPQT(0.401)S(0.401)S(0.144)T(0.053)PPRDLDS(0.001)K 70.358 0.022293 19221000 65057 65028 60816 77486 65288 58170 71236 66266 57733 70921 TRUE FALSE 70037.81394 61798.80408 62843.57509 71155.14593 62724.46507 60383.70011 61882.62763 74927.19373 62754.51198 68606.85358 1.020857397 0.90076721 0.915995587 1.037143408 0.914259462 0.880140933 0.901989006 1.092124035 0.91469742 1 16.06606508 -7.719935035 24.99971752 1.002559157 0.936990992 0.176187728 0.062880042 236.2734701 142316.6713 0.029180503 0.016847167 1.91E-08 7.719935035 -0.065568165 EAFEQPQTSS(ph)TPPRDLDSK ddPTM_A459_MK2206_30min_R1 1 EAFEQPQTSSTPPRDLDSK 19 1 P52564;A0A0A0MRF7;K7EIW3 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 1 EAFEQPQT(0.166)S(0.166)S(0.502)T(0.166)PPRDLDSK 94.564 0.00099296 20423000 1862.1 1885.7 1516.9 1540.3 2031.5 1532.6 1628.1 1938.4 1486.6 1575.3 TRUE FALSE 1703.718617 1762.940587 1413.937054 1658.934173 1950.581053 1619.374488 1519.49242 1921.452773 1641.13739 1770.460057 0.96230277 0.995752816 0.798626916 0.937007399 1.101736831 0.914663102 0.858247219 1.085284452 0.926955332 1 10.78990858 -7.62431686 0.431039262 0.999298806 0.934377329 0.035200218 0.087138953 4.265751585 1.981802465 0.100292866 0.086695798 2.38E-08 7.62431686 -0.064921478 EAFEQPQTSST(ph)PPR ddPTM_A459_MK2206_30min_R1 1 EAFEQPQTSSTPPR 14 0 P52564;A0A0A0MRF7;K7EIW3 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 1 EAFEQPQT(0.002)S(0.015)S(0.353)T(0.629)PPR 106.6 0.012793 3207000 919.12 1254.6 1281.7 888.88 1033.5 1047.1 1248.9 799.35 1101.8 1441.4 TRUE FALSE 840.9440175 1172.925312 1194.701775 957.3416916 992.3335065 1106.385897 1165.58816 792.3613672 1216.336053 1619.971514 0.519110373 0.724040702 0.737483199 0.590962053 0.612562318 0.682966267 0.719511516 0.489120556 0.750837927 1 10.66175273 -8.538392242 23.11198924 1.000000004 0.641711103 0.653650188 0.080898258 617.9956809 920689.372 0.0762207 0.0196801 2.89E-09 8.538392242 -0.358288901 EAFEQPQTSST(ph)PPR ddPTM_A459_MK2206_30min_R2 2 EAFEQPQTSSTPPR 14 0 P52564;A0A0A0MRF7;K7EIW3 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 1 EAFEQPQT(0.009)S(0.029)S(0.089)T(0.873)PPR;EAFEQPQT(0.006)S(0.029)S(0.293)T(0.672)PPR 148.7 0.00037867 3966300 45997 38500 31726 48463 37731 40354 46635 38466 32192 44982 TRUE FALSE 49518.56569 36588.14598 32783.72901 44503.41787 36249.49136 41889.69975 40511.76848 43493.63827 34992.00197 43514.24102 1.137985278 0.840831533 0.753402294 1.022732256 0.833048917 0.962666446 0.931000232 0.999526529 0.804150576 1 15.40920001 EAFEQPQTSST(ph)PPRDLDSK ddPTM_A459_MK2206_30min_R1 1 EAFEQPQTSSTPPRDLDSK 19 1 P52564;A0A0A0MRF7;K7EIW3 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 1 EAFEQPQT(0.026)S(0.026)S(0.026)T(0.922)PPRDLDSK 83.082 0.0065799 7448900 1985.9 1769.6 1811.1 1221.6 2031.9 1767.9 1983.4 1942.1 1571.2 1621.7 TRUE FALSE 1816.988777 1654.398718 1688.167578 1315.687844 1950.96512 1867.99697 1851.091005 1925.120424 1734.531863 1822.608439 0.996916692 0.907709348 0.926237113 0.721870817 1.070424716 1.024903062 1.015627364 1.056244656 0.951675536 1 10.83178894 -6.322018605 24.99999982 1.022670086 0.892294197 0.451393897 0.070990396 224.612629 92693.08696 0.021898199 0.024830229 4.76E-07 6.322018605 -0.130375889 EAFSLFDKDGDGTITTK ddPTM_A459_MK2206_30min_R1 2 EAFSLFDKDGDGTITTK 17 1 P0DP25;P0DP24;P0DP23;E7EMB3;M0QZ52;F8WBR5;G3V479 P0DP25 CALM2;CALM3;CALM1 0 ; 169.64 2.77E-06 122823000 9095.2 9393.1 9240.5 9227 9204.1 8268.3 8498.3 9240.6 7855.5 7327.1 FALSE TRUE 8321.605479 8781.607483 8613.280606 9937.665139 8837.481207 8736.444001 7931.393913 9159.810408 8672.107336 8234.836465 1.010536823 1.066397313 1.045956485 1.206783545 1.073182357 1.060912872 0.963151357 1.112324507 1.053100128 1 13.00752428 -6.874669106 4.080964133 1.038272363 1.084816635 0.120875283 0.059421539 0.534690699 16.22077857 0.022442184 0.019766089 1.33E-07 6.874669106 0.046544273 EAFSLFDKDGDGTITTK ddPTM_A459_MK2206_30min_R2 2 EAFSLFDKDGDGTITTK 17 1 P0DP25;P0DP24;P0DP23;E7EMB3;M0QZ52;F8WBR5;G3V479 P0DP25 CALM2;CALM3;CALM1 0 ; 140.46 0.0014198 54174000 174747 194355 178866 210397 176069 148741 204180 151818 153200 181493 FALSE TRUE 188125.7647 184703.6133 184829.3032 193206.8921 169155.6464 154401.443 177370.9207 171661.1339 166525.0591 175570.8983 1.071508812 1.052017249 1.052733141 1.100449414 0.963460619 0.879425033 1.010252396 0.977731136 0.948477571 1 17.42169421 -6.274217662 24.53867758 0.960272432 1.066776872 0.680091617 0.035549927 354.4081946 680583.2172 0.011189389 0.012775512 5.32E-07 6.274217662 0.10650444 EAGDVCYADVYR ddPTM_A459_MK2206_30min_R2 1 EAGDVCYADVYR 12 0 J3KTL2;Q07955;Q07955-3;Q07955-2;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 0 129.88 0.03037 0 30147 36406 36604 31631 38466 30817 37290 28464 33577 37532 FALSE TRUE 32455.0775 34598.13098 37824.35909 29046.64612 36955.63156 31989.76253 32393.77821 32184.34253 36497.46677 36307.33391 0.89389867 0.952924031 1.041782886 0.800021455 1.017855832 0.881082665 0.892210325 0.886441913 1.005236762 1 15.14797337 -8.27779318 23.96903207 1.00261843 0.922817685 0.195290007 0.066349165 900.1014945 1319217.268 0.060741713 0.015900709 5.27E-09 8.27779318 -0.079800745 EAGELPT(ph)SPLHLLSPGTPR ddPTM_A459_MK2206_30min_R2 2 EAGELPTSPLHLLSPGTPR 19 0 Q969R5;H7C228;Q969R5-2;Q969R5-3 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 1 EAGELPT(0.5)S(0.5)PLHLLSPGTPR;EAGELPT(0.601)S(0.399)PLHLLSPGTPR 174.87 9.08E-10 10589900 36131 33901 31603 34649 33428 31582 38235 26893 25772 39498 TRUE FALSE 38897.21714 32217.52564 32656.62825 31818.06586 32115.44876 32783.87514 33214.69857 30408.00744 28013.60197 38209.18349 1.018007023 0.843188016 0.854680086 0.832733468 0.840516489 0.858010356 0.869285746 0.795829815 0.733164109 1 15.22163181 -4.761374965 8.412999901 0.841556027 1.019745964 0.391202144 0.063431094 0.08565844 63.97413288 0.014955375 0.08669872 1.73E-05 4.761374965 0.178189937 EAGELPTS(ph)PLHLLSPGTPR ddPTM_A459_MK2206_30min_R1 2 EAGELPTSPLHLLSPGTPR 19 0 Q969R5;H7C228;Q969R5-2;Q969R5-3 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 1 EAGELPT(0.204)S(0.796)PLHLLSPGTPR;EAGELPT(0.03)S(0.97)PLHLLSPGTPR 180.16 3.38E-13 35219000 4425.8 3733.1 4159.7 2865.5 4108.6 4255.8 5734.1 3529.5 5018.9 6620.4 TRUE FALSE 4049.362469 3490.074511 3877.351154 3086.201307 3944.945762 4496.759718 5351.588651 3498.641954 5540.632615 7440.585133 0.544226347 0.469059146 0.521108365 0.414779382 0.530192947 0.604355657 0.719242984 0.470210594 0.74465012 1 12.86120037 -9.683173337 0.296197516 1.152100851 0.464193647 0.774293997 0.0791605 3.10705259 0.370365537 0.603356037 0.100062157 2.07E-10 9.683173337 -0.687907204 EAGELPTS(ph)PLHLLSPGTPR ddPTM_A459_MK2206_30min_R2 3 EAGELPTSPLHLLSPGTPR 19 0 Q969R5;H7C228;Q969R5-2;Q969R5-3 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 1 EAGELPT(0.197)S(0.803)PLHLLSPGTPR;EAGELPT(0.051)S(0.949)PLHLLSPGTPR;EAGELPT(0.165)S(0.835)PLHLLSPGTPR 131.56 0.0001752 36513900 68942 74334 74032 87378 70159 71387 79739 68139 59703 78821 TRUE FALSE 74220.25253 70642.68165 76500.18993 80238.93789 67404.20514 74103.68231 69269.17352 77045.00126 64895.85902 76249.07723 0.973392141 0.926472611 1.003293321 1.052326675 0.884000274 0.971863333 0.908459171 1.010438474 0.851103533 1 16.21843226 -6.270884829 24.9703911 0.938417771 0.9854443 0.172380057 0.054767941 1285.081814 3397290.852 0.016367734 0.018801093 5.36E-07 6.270884829 0.047026529 EAGENAPVLS(ph)DDELVSMSVR ddPTM_A459_MK2206_30min_R1 1 EAGENAPVLSDDELVSMSVR 20 0 O60675 O60675 MAFK Transcription factor MafK 1 EAGENAPVLS(0.997)DDELVS(0.002)MS(0.001)VR 165.03 4.97E-08 4298600 1411.1 1082 1293.4 1259.2 1491.2 1415 1492.1 1397.9 1583.7 963.99 TRUE FALSE 1291.078535 1011.561603 1205.607612 1356.183802 1431.802346 1495.116077 1392.564731 1385.678308 1748.331282 1083.416359 1.191673473 0.933677616 1.112783282 1.251766037 1.321562421 1.380001386 1.28534586 1.278989648 1.613720587 1 10.08137206 -5.81402403 2.554713937 1.32756329 1.054583795 0.321480442 0.151774133 0.286383179 3.806041269 0.042743738 0.074445381 1.53E-06 5.81402403 -0.272979495 EAGEQGDIEPR ddPTM_A459_MK2206_30min_R1 2 EAGEQGDIEPR 11 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 0 ; 146.71 0.010188 7471400 5414.1 5408.2 5011.7 4673.4 5331.2 5153 5377.9 5326 4075.6 4259.2 FALSE TRUE 4953.602364 5056.125197 4671.519767 5033.346078 5118.847015 5444.758407 5019.150104 5279.435344 4499.273205 4786.861851 1.034832949 1.056250494 0.975904447 1.05149182 1.069353404 1.137437966 1.048526208 1.10290113 0.939921256 1 12.22486446 -4.449013979 15.44635138 1.047707803 0.856723577 0 0.05541119 3443850.48 14762271.42 0.01374153 21368694.03 3.56E-05 4.449013979 -0.190984225 EAGFPPGVVNIVPGYGPTAGAAISSHMDIDK ddPTM_A459_MK2206_30min_R1 1 EAGFPPGVVNIVPGYGPTAGAAISSHMDIDK 31 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 109.05 4.44E-11 7102400 1072.9 1083.7 1009.2 749.13 1152.4 964.02 1392.6 990.12 600.48 773.78 FALSE TRUE 981.644221 1013.150933 940.6983158 806.8281224 1106.497468 1018.601979 1299.702195 981.4634852 662.9020448 869.6417081 1.128791561 1.165021093 1.081707911 0.92777073 1.272360166 1.171289244 1.494526059 1.128583733 0.762270299 1 9.764277324 -8.149498495 6.261669012 0.885102703 1.176364228 0.390268838 0.145796479 0.240894223 11.45374836 0.10595019 0.039114397 7.09E-09 8.149498495 0.291261525 EAGS(ph)PAQEFK ddPTM_A459_MK2206_30min_R1 4 EAGSPAQEFK 10 0 Q5JSZ5;Q5JT00;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 EAGS(1)PAQEFK;EAGS(1)PAQEFK;EAGS(1)PAQEFK;EAGS(1)PAQEFK 156.52 0.00050742 140726000 19230.4 20711.1 20786.1 17052.8 17620 15122 19117.6 16693.3 19239.1 17678.5 TRUE FALSE 17594.7535 19362.80363 19375.19745 18366.20961 16918.15809 15978.19457 17842.29979 16547.35224 21239.07329 19868.64605 0.885553724 0.97454067 0.975164458 0.924381539 0.851500301 0.804191415 0.898012866 0.832837436 1.068974365 1 14.27820594 -8.268639402 24.84740278 1.034487197 0.895544615 0.514131442 0.05487569 506.4651798 1747794.408 0.054596693 0.015269225 5.39E-09 8.268639402 -0.138942582 EAGS(ph)PAQEFK ddPTM_A459_MK2206_30min_R2 4 EAGSPAQEFK 10 0 Q5JSZ5;Q5JT00;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 EAGS(1)PAQEFK;EAGS(1)PAQEFK;EAGS(1)PAQEFK;EAGS(1)PAQEFK 153.81 0.00058138 172110700 202461 202622 204370 206551 202695 168235 240389 180265 174602 196905 TRUE FALSE 217961.5698 192560.0861 211183.5938 189675.1226 194736.1758 174637.3008 208825.6355 203826.2544 189788.5664 190480.006 1.14427532 1.010920202 1.108691659 0.995774447 1.022344444 0.916827464 1.096312626 1.070066401 0.996370015 1 17.53928005 -1.522881659 1.061610565 1.022319991 173.6310407 0.295771128 0.053935215 3122.029495 3.152148794 0.016244605 1312883.329 0.029999799 1.522881659 172.6087207 EAGT(ph)PSLDSEAK ddPTM_A459_MK2206_30min_R1 1 EAGTPSLDSEAK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 EAGT(0.98)PS(0.018)LDS(0.002)EAK 135.58 0.0034567 16648000 4877.6 5153.9 4805.2 4400.3 3960.3 3409.6 4242.2 4179.4 4272.2 4384.9 TRUE FALSE 4462.734507 4818.380173 4479.036412 4739.211868 3802.552865 3602.648605 3959.210578 4142.859946 4716.310478 4928.134516 0.905562641 0.977729029 0.908870567 0.96166447 0.771600867 0.731036986 0.803389308 0.840654802 0.957017399 1 12.26682592 -6.247328503 24.86779301 0.834308958 0.939148556 0.214007498 0.078831959 1003.467352 1768423.906 0.023638197 0.030364917 5.66E-07 6.247328503 0.104839598 EAGT(ph)PSLDSEAK ddPTM_A459_MK2206_30min_R2 2 EAGTPSLDSEAK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 EAGT(0.856)PS(0.138)LDS(0.005)EAK;EAGT(0.996)PS(0.004)LDSEAK 137.81 0.0030248 32671000 259620 266826 244064 273882 265726 222720 278198 231414 217860 317210 TRUE FALSE 279496.7068 253575.8088 252200.9719 251504.9645 255292.2621 231195.7657 241670.2684 261660.6044 236809.069 306859.4637 0.910829679 0.826358118 0.821877771 0.819609607 0.831951731 0.753425568 0.787560095 0.852705018 0.771718317 1 18.22721855 -10.9262344 3.544566791 1.001390621 0.818282224 0.628187253 0.041635511 61311987.42 69704261.62 830450.8014 0.010452131 1.19E-11 10.9262344 -0.183108397 EAIEGTYIDKK ddPTM_A459_MK2206_30min_R2 2 EAIEGTYIDKK 11 1 P62280;M0QZC5 P62280 RPS11 40S ribosomal protein S11 0 ; 143 0.0011848 20244300 66140 72013 73863 80366 78514 66895 79468 50978 58162 80255 FALSE TRUE 71203.72925 68436.93914 76325.55555 73799.84072 75431.14586 69440.7361 69033.75614 57640.99963 63220.82563 77636.28592 0.917144972 0.881507124 0.983117039 0.95058438 0.971596528 0.894436606 0.88919447 0.742449216 0.814320583 1 16.24444348 -7.27556246 2.475539444 0.834225741 0.938671352 0.206234786 0.067466459 0.355678451 4.294730353 0.031165363 0.020453504 5.30E-08 7.27556246 0.104445611 EAILAIHK ddPTM_A459_MK2206_30min_R1 1 EAILAIHK 8 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 117.04 0.012726 16717000 12318 12684 12444 10961 12828 11032 12478 10951 9824.7 9282.5 FALSE TRUE 11270.28942 11858.26929 11599.33595 11805.21812 12317.0336 11656.62231 11645.61539 10855.25656 10846.01272 10432.48618 1.08030715 1.136667626 1.111847718 1.131582436 1.180642216 1.117338869 1.116283807 1.040524413 1.03963835 1 13.34879539 -7.816116494 2.030612169 1.018293748 1.129246823 0.763653559 0.025222003 0.163197278 1.302823985 0.018959032 0.007448336 1.53E-08 7.816116494 0.110953074 EAILAIHK ddPTM_A459_MK2206_30min_R2 2 EAILAIHK 8 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 103.56 0.021516 28012000 366660 424830 406080 449900 443310 418220 462170 366310 390560 453570 FALSE TRUE 394731.7715 403733.56 419618.5045 413141.7308 425903.4219 434135.6552 401486.5238 414187.9747 424530.2028 438770.048 0.899632446 0.920148405 0.956351753 0.94159055 0.970675696 0.989437764 0.915027189 0.943975042 0.967545995 1 18.74310552 -5.013061939 1.464491886 0.959040216 0.887974699 0.448751371 0.022989014 0.763082449 2.072318076 0.006825539 0.070119976 9.70E-06 5.013061939 -0.071065517 EAIS(ph)DEDEDEALYQK ddPTM_A459_MK2206_30min_R1 2 EAISDEDEDEALYQK 15 0 Q9C0B7 Q9C0B7 TANGO6 Transport and Golgi organization protein 6 homolog 1 EAIS(1)DEDEDEALYQK;EAIS(1)DEDEDEALYQK 232.17 4.76E-14 5701100 1507.25 1488.32 1474.83 1477.44 1433.58 1326.45 1619.03 1307.22 1475.01 1115.91 TRUE FALSE 1379.050473 1391.430097 1374.722649 1591.232685 1376.477473 1401.552453 1511.027463 1295.791113 1628.342568 1254.157355 1.099583291 1.109454162 1.096132509 1.268766378 1.097531715 1.117525203 1.204814895 1.033196598 1.298355873 1 10.29250265 EAIS(ph)DEDEDEALYQK ddPTM_A459_MK2206_30min_R2 2 EAISDEDEDEALYQK 15 0 Q9C0B7 Q9C0B7 TANGO6 Transport and Golgi organization protein 6 homolog 1 EAIS(1)DEDEDEALYQK;EAIS(1)DEDEDEALYQK 133.47 0.0005348 3342900 13799.5 16710.1 12899.6 16111.2 19232.9 14867.6 16628.4 16139.1 16905 15062.5 TRUE FALSE 14856.00033 15880.30073 13329.66623 14794.86342 18477.71971 15433.39694 14445.07111 18248.53578 18375.36634 14571.01186 1.019558592 1.089855728 0.914807177 1.015362802 1.268115069 1.059184982 0.99135676 1.252386311 1.261090618 1 13.83081345 -6.051087607 23.7443185 1.140127716 1.007724151 0.270465615 0.103660162 278.7255259 129544.303 0.031530767 0.040706884 8.89E-07 6.051087607 -0.132403564 EALAEAALES(ph)PR ddPTM_A459_MK2206_30min_R1 1 EALAEAALESPR 12 0 J3QRP6;O14745;O14745-2 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 EALAEAALES(1)PR 88.021 0.02772 972080 588.14 463.62 613.32 472.26 727.59 623.43 574.11 469.59 371.6 537.03 TRUE FALSE 538.1156046 433.4382537 571.6895472 508.633547 698.6085496 658.7280678 535.8121694 465.4844241 410.2291498 603.5613308 0.891567397 0.718134565 0.947193795 0.842720567 1.157477317 1.09140204 0.887750991 0.7712297 0.679680968 1 9.237356567 -11.94185472 2.192384036 1.883481438 0.893452396 0.051076268 0.143444799 17534339.21 1619365.864 76952522.99 0.03908698 1.14E-12 11.94185472 -0.990029042 EALAEAALES(ph)PRPALVR ddPTM_A459_MK2206_30min_R1 6 EALAEAALESPRPALVR 17 1 J3QRP6;O14745;O14745-2 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR 141.3 0.00027592 1019369000 14372.6 12318.2 11950.7 9901.4 15365.6 13647.1 13895.6 12132.8 10273.9 9649.4 TRUE FALSE 13150.1349 11516.28294 11139.51978 10664.00754 14753.55561 14419.78701 12968.64988 12026.72421 11341.90867 10844.84052 1.212570611 1.061913536 1.0271723 0.983325437 1.36042163 1.329644911 1.195835923 1.108981196 1.045834528 1 13.40472122 -3.281507833 15.66101845 1.140122087 44.63945614 0 0.128746701 0 7.07E-18 0.031823402 0 0.000522989 3.281507833 43.49933405 EALAEAALES(ph)PRPALVR ddPTM_A459_MK2206_30min_R2 3 EALAEAALESPRPALVR 17 1 J3QRP6;O14745;O14745-2 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR 105.52 0.0014554 563800000 64491 89355 70140 106346 83734 116444 76236 79890 89762 76380 TRUE FALSE 69428.48055 84917.76063 72478.43259 97657.19162 80446.18243 120875.358 66226.12162 90331.8973 97569.33651 73887.72686 0.939648349 1.149281 0.980926545 1.321697064 1.088762449 1.635932829 0.896307471 1.222556183 1.320508028 1 16.17304712 -5.752637891 24.99154325 1.220868795 1.035884847 0.159780569 0.197253925 354.2726468 1005935.164 0.051536388 0.08756644 1.77E-06 5.752637891 -0.184983948 EALASLPS(ph)SPGLLQSLLER ddPTM_A459_MK2206_30min_R1 1 EALASLPSSPGLLQSLLER 19 0 P41229-4;P41229-3;P41229-2;P41229-5;P41229 P41229-4 KDM5C Lysine-specific demethylase 5C 1 EALASLPS(0.664)S(0.334)PGLLQS(0.001)LLER 158.92 1.44E-05 0 199.41 166.06 353.71 175.25 203.18 345.64 276.67 338.63 209.15 133.24 TRUE FALSE 182.4491324 155.2494638 329.7011507 188.7477854 195.0869104 365.2098381 258.2138491 335.6693936 230.891891 149.7467771 1.218384368 1.036746612 2.201724518 1.260446395 1.302778692 2.438849404 1.724336604 2.241580087 1.541882205 1 7.226381143 EALASLPSS(ph)PGLLQSLLER ddPTM_A459_MK2206_30min_R1 1 EALASLPSSPGLLQSLLER 19 0 P41229-4;P41229-3;P41229-2;P41229-5;P41229 P41229-4 KDM5C Lysine-specific demethylase 5C 1 EALASLPS(0.231)S(0.769)PGLLQSLLER 176.94 8.16E-13 2803200 571.34 525.17 642.5 398.15 634.15 522.4 596.68 528.12 516.52 432.96 TRUE FALSE 522.7445328 490.9813375 598.8888901 428.815582 608.8904627 551.9778366 556.8765659 523.5027025 570.2141024 486.5983535 1.074283398 1.009007396 1.230766372 0.881251609 1.251320434 1.134360264 1.144427559 1.0758415 1.171837303 1 8.926587628 -6.300208754 24.99921908 1.134399478 1.058978159 0.130792123 0.100246802 1174.774398 757513.4515 0.029365268 0.033297789 5.01E-07 6.300208754 -0.075421319 EALATLPS(ph)SPGLLR ddPTM_A459_MK2206_30min_R2 1 EALATLPSSPGLLR 14 0 E9PFH2;Q9BY66-2;Q9BY66;Q9BY66-3 E9PFH2 KDM5D Lysine-specific demethylase 5D 1 EALAT(0.001)LPS(0.592)S(0.407)PGLLR 111.88 0.0037919 2502000 9787.9 13561 14227 17841 17409 16372 15796 11071 12108 13941 TRUE FALSE 10537.26915 12887.58046 14701.32108 16383.33323 16725.43519 16995.04793 13721.96623 12518.01771 13161.13195 13486.10631 0.781342584 0.955619077 1.090108645 1.214830497 1.240197489 1.260189379 1.017489104 0.928215856 0.975903026 1 13.71918626 -11.60322462 2.799220111 0.896411418 1.061715795 0.006823097 0.14577567 24773551.94 27024990.91 16820807.86 0.040769875 2.49E-12 11.60322462 0.165304376 EALEAYRR ddPTM_A459_MK2206_30min_R2 1 EALEAYRR 8 1 Q9NRF9 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 0 101.72 0.021211 0 10647 16296 13916 18017 20736 18497 14540 12439 20330 12491 FALSE TRUE 11462.14251 15486.76434 14379.95249 16544.95347 19921.80045 19200.9163 12630.88053 14064.82001 22098.26665 12083.41969 0.948584324 1.281654095 1.190056529 1.369227742 1.648688944 1.589029992 1.04530678 1.163976785 1.828808997 1 13.56074118 -4.173182352 1.029731113 1.379282592 1.88E-07 0.189200545 0.254431605 9.580575098 3.413433859 0.081520063 19.67745825 6.71E-05 4.173182352 -1.379282404 EALGLGPPAAQLT(ph)PPPAPVGLR ddPTM_A459_MK2206_30min_R1 2 EALGLGPPAAQLTPPPAPVGLR 22 0 A0A087WZ13;E9PAU2;Q8IY67-2;Q8IY67 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR 264.1 4.61E-54 90153000 11405.7 11654.6 10855.6 8023.5 10043.1 9572.5 9643.7 7698.3 9421.2 8439.4 TRUE FALSE 10435.58532 10895.88342 10118.75212 8641.47136 9643.06206 10114.48668 9000.386369 7630.994575 10400.56745 9484.936586 1.10022721 1.148756591 1.066823381 0.911073182 1.016671221 1.066373674 0.94891371 0.804538281 1.096535265 1 13.21142241 -5.563161502 5.5684661 0.974000514 1.121256958 0.373767127 0.077861522 0.180694604 13.91680094 0.021484845 0.038624511 2.73E-06 5.563161502 0.147256443 EALGLGPPAAQLT(ph)PPPAPVGLR ddPTM_A459_MK2206_30min_R2 4 EALGLGPPAAQLTPPPAPVGLR 22 0 A0A087WZ13;E9PAU2;Q8IY67-2;Q8IY67 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR 183.27 2.87E-16 111422000 195037 242256 208877 219868 173742 174646 185591 145951 154541 176536 TRUE FALSE 209969.1827 230225.9193 215840.8549 201904.0811 166920.0161 181292.2759 161222.6788 165027.2968 167982.6968 170775.6448 1.229503088 1.348119163 1.263885463 1.18227679 0.977422842 1.061581563 0.944061309 0.966339767 0.983645514 1 17.38174271 -6.083688181 2.114426037 0.984578349 1.291377279 0.914094789 0.040823242 0.080691141 0.714038798 0.012986109 0.019109696 8.25E-07 6.083688181 0.30679893 EALGQNEES(ph)PK ddPTM_A459_MK2206_30min_R2 1 EALGQNEESPK 11 0 Q9H8Y5;B8ZZS4 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 EALGQNEES(1)PK 111.83 0.0080211 31804000 92352 73132 65117 69600 65870 64650 86427 58393 56673 73016 TRUE FALSE 99422.54013 69500.37122 67287.96828 63913.45736 63283.61283 67110.30105 75079.03108 66025.16559 61602.3151 70633.4939 1.407583494 0.983957714 0.952635422 0.904860482 0.895943402 0.950120083 1.06293809 0.93475718 0.872140279 1 16.10806484 -4.758614314 4.359298265 0.946409551 1.451027366 0.877280459 0.051418021 0.074105074 2.946941483 0.013615407 0.119392613 1.74E-05 4.758614314 0.504617816 EALPWGLEPQDVQSSDEMRS(ph)PEGYLR ddPTM_A459_MK2206_30min_R1 1 EALPWGLEPQDVQSSDEMRSPEGYLR 26 1 Q9H5H4 Q9H5H4 ZNF768 Zinc finger protein 768 1 EALPWGLEPQDVQSS(0.001)DEMRS(0.903)PEGY(0.095)LR 81.406 7.21E-05 6197500 1061.6 1009.5 920 896.99 1279.2 1086.1 1004.1 873.92 777.38 708 TRUE FALSE 971.3053453 943.7813665 857.5529633 966.0763252 1228.246755 1147.594043 937.1183211 866.2794096 858.1914329 795.7123851 1.220673906 1.186083545 1.07771725 1.214102411 1.543581297 1.442222171 1.177709859 1.088684085 1.078519637 1 9.636103244 -7.628654759 3.497320743 1.060824905 1.278059408 0.386810018 0.126278092 0.306790606 7.283968133 0.076817225 0.040991928 2.35E-08 7.628654759 0.217234502 EALQDVEDENQ ddPTM_A459_MK2206_30min_R2 1 EALQDVEDENQ 11 0 P62258;P62258-2;I3L0W5 P62258 YWHAE 14-3-3 protein epsilon 0 145.72 0.03587 0 85954 54290 72658 76232 59352 67840 58739 63888 48115 72620 FALSE TRUE 92534.70433 51594.03755 75080.38146 70003.60175 57021.54226 70421.69874 51026.49874 72238.38096 52299.95573 70250.41535 1.317212203 0.734430356 1.068753559 0.99648666 0.811689753 1.002438183 0.726351559 1.028298276 0.744478954 1 16.10021913 -4.746086998 24.99784365 0.905400006 1.317213318 0.485969079 0.128225169 712.2510825 1159674.168 0.029556399 0.699520603 1.79E-05 4.746086998 0.411813312 EALS(ph)PCPSTVSTK ddPTM_A459_MK2206_30min_R1 4 EALSPCPSTVSTK 13 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 EALS(0.986)PCPS(0.004)T(0.009)VSTK;EALS(0.992)PCPS(0.008)TVSTK;EALS(0.996)PCPS(0.002)T(0.002)VSTK;EALS(0.829)PCPS(0.161)T(0.01)VSTK 136.33 0.0011 74210000 14713.4 14899.3 13500.4 12921.7 14855.3 13575.4 13153.2 13149.4 11807.7 11047.1 TRUE FALSE 13461.94807 13929.35286 12584.03046 13916.93157 14263.58194 14344.02742 12275.77403 13034.43618 13035.15267 12415.69815 1.084268311 1.121914587 1.013558022 1.120914137 1.148834465 1.155313801 0.988730064 1.049835138 1.049892846 1 13.59987777 -7.266432387 24.99962916 1.026267441 1.106346872 0.506404348 0.041191481 411.0761223 2058217.655 0.017933534 0.012511393 5.41E-08 7.266432387 0.080079431 EALS(ph)PCPSTVSTK ddPTM_A459_MK2206_30min_R2 2 EALSPCPSTVSTK 13 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 EALS(1)PCPSTVSTK;EALS(0.998)PCPS(0.001)TVSTK 180.3 0.00011186 66785000 182151 201198 199821 221033 211495 195462 222634 180975 197064 220148 TRUE FALSE 196096.6206 191206.7999 206482.9324 202973.8969 203190.6436 202900.4434 193401.8884 204629.0539 214204.2705 212964.5888 0.920794493 0.897833771 0.969564628 0.953087544 0.954105304 0.952742634 0.908141065 0.960859526 1.00582107 1 17.70025404 -1.522878885 0.043999102 1.135173313 0.632868319 0.457115913 0.024904046 647.189796 2.169397961 6.395517827 23.25927822 0.02999999 1.522878885 -0.502304993 EALTYDGALLGDR ddPTM_A459_MK2206_30min_R2 1 EALTYDGALLGDR 13 0 Q15056-2;Q15056 Q15056-2 EIF4H Eukaryotic translation initiation factor 4H 0 125.72 0.029087 3761200 26450 25741 27605 31863 28129 22592 36426 25765 25650 30005 FALSE TRUE 28475.03234 24462.73937 28525.33692 29259.69098 27024.51412 23451.75439 31643.22244 29132.57396 27880.99064 29025.93931 0.981020185 0.842788897 0.982753275 1.008053199 0.931047014 0.8079585 1.090170489 1.003673771 0.960554294 1 14.82505513 -7.281336351 24.99323678 1.013905772 0.928432057 0.30184473 0.065476763 1154.420078 1450099.078 0.028037787 0.018933705 5.23E-08 7.281336351 -0.085473715 EAMEDGEIDGNK ddPTM_A459_MK2206_30min_R2 1 EAMEDGEIDGNK 12 0 P19338;H7BY16 P19338 NCL Nucleolin 0 144.55 0.010157 4412300 29933 30436 34159 28552 27551 25847 45576 32807 26272 37649 FALSE TRUE 32224.69349 28924.5925 35297.84401 26219.21027 26469.20931 26830.6257 39591.81645 37094.98754 28557.09107 36420.51621 0.884795078 0.794184034 0.969174731 0.719902214 0.726766451 0.736689879 1.087074555 1.018518994 0.784093529 1 15.15246375 -7.25195533 24.98228333 0.973965022 0.804752936 0.394384787 0.101476566 719.779009 1895999.84 0.04049172 0.030933282 5.60E-08 7.25195533 -0.169212086 EANANGS(ph)SPEPVK ddPTM_A459_MK2206_30min_R1 4 EANANGSSPEPVK 13 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EANANGS(0.5)S(0.5)PEPVK;EANANGS(0.5)S(0.5)PEPVK;EANANGS(0.5)S(0.5)PEPVK;EANANGS(0.5)S(0.5)PEPVK 175.6 9.89E-05 130120000 25872.3 25793.8 22881.4 20918 22156.3 21972.4 23786.8 21913.3 22553.1 20566.4 TRUE FALSE 23671.72502 24114.61893 21328.27432 22529.10798 21273.76765 23216.4583 22200.02597 21721.71433 24897.57545 23114.3209 1.024115098 1.043276116 0.92272987 0.974681804 0.920371736 1.004418793 0.960444655 0.939751353 1.077149338 1 14.49649936 -8.258697215 24.99349133 1.038574668 0.973176375 0.27121102 0.042515413 303.8788048 2769775.959 0.032310489 0.01094178 5.51E-09 8.258697215 -0.065398293 EANANGS(ph)SPEPVK ddPTM_A459_MK2206_30min_R2 4 EANANGSSPEPVK 13 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EANANGS(0.773)S(0.227)PEPVK;EANANGS(0.774)S(0.226)PEPVK;EANANGS(0.772)S(0.228)PEPVK;EANANGS(0.774)S(0.226)PEPVK 223.14 6.21E-09 291329000 500154 506370 460422 473137 489591 442029 603881 449247 374859 498663 TRUE FALSE 538446.1748 481224.4021 475772.2397 434480.1936 470367.1973 458850.7233 524590.6993 507965.1254 407463.5582 482391.6671 1.116201235 0.997580255 0.986277898 0.900679309 0.975073222 0.951199522 1.087478775 1.053013889 0.844673708 1 18.87984546 -4.737738293 3.002320025 0.977652582 1.147864636 0.293878846 0.065297182 0.63535879 7.493195847 0.017046767 0.276808792 1.83E-05 4.737738293 0.170212054 EANANGSS(ph)PEPVKAVEAR ddPTM_A459_MK2206_30min_R1 2 EANANGSSPEPVKAVEAR 18 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EANANGS(0.07)S(0.93)PEPVKAVEAR;EANANGS(0.015)S(0.985)PEPVKAVEAR 107.92 0.00085568 18953600 5545.2 4154.5 4668.7 5626 6940.6 5081.9 3554 7165.7 1662.71 989.49 TRUE FALSE 5073.551621 3884.041295 4351.801652 6059.315495 6664.141205 5369.632786 3316.919145 7103.05104 1835.554655 1112.075491 4.562236701 3.492605785 3.913225033 5.448654827 5.992525918 4.828478667 2.982638472 6.387202213 1.650566593 1 10.11903901 -4.46405227 20.68325986 4.226331104 10.09553146 0 1.699188038 1942.405359 699725.9146 0.386050892 12574.66585 3.44E-05 4.46405227 5.869200352 EAPAEGEAAEPGS(ph)PTAAEGEAASAASSTSSPK ddPTM_A459_MK2206_30min_R2 2 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK 32 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 EAPAEGEAAEPGS(0.898)PT(0.102)AAEGEAASAASSTSSPK;EAPAEGEAAEPGS(0.983)PT(0.017)AAEGEAASAASSTSSPK 117.99 9.60E-17 32143000 374630 409700 338360 334630 276480 235330 254480 211030 256810 242120 TRUE FALSE 403311.9608 389354.8938 349640.7535 307289.6586 265624.006 244285.6481 221066.4703 238612.3456 279146.8696 234219.6442 1.721939089 1.662349437 1.492790046 1.311972186 1.134080819 1.04297677 0.943842567 1.018754624 1.191816641 1 17.83750256 -5.806421809 1.109209934 1.030079803 1.736958711 0.948991269 0.060807746 0.115804047 0.278919345 0.024080655 0.063177699 1.56E-06 5.806421809 0.706878908 EAPGS(ph)PPLS(ph)PR ddPTM_A459_MK2206_30min_R2 1 EAPGSPPLSPR 11 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;E9PNR0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 2 EAPGS(1)PPLS(1)PR 139.64 0.02097 27909000 130510 189030 150550 182090 165070 181950 190610 138390 164750 180850 TRUE FALSE 140501.9459 179643.0451 155569.2619 167212.6645 158588.5224 188874.2347 165582.678 156478.0482 179079.6572 174948.8793 0.803102864 1.026831642 0.88922697 0.955780141 0.906484929 1.079596711 0.946463211 0.894421552 1.023611342 1 17.4165739 -4.746942546 24.87747223 0.963725715 0.803102421 0.403453618 0.060250587 753.8293051 1293540.536 0.014521129 0.309547454 1.79E-05 4.746942546 -0.160623295 EAPGS(ph)PPLSPR ddPTM_A459_MK2206_30min_R1 1 EAPGSPPLSPR 11 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;E9PNR0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 EAPGS(0.936)PPLS(0.064)PR 139.19 0.0011888 55941000 4268.8 3643.6 4272.6 3936.5 4236.6 4303.5 4433.5 4002.4 4078.7 2833.5 TRUE FALSE 3905.716144 3406.400978 3982.587816 4239.689912 4067.847251 4547.160451 4137.749304 3967.407439 4502.695461 3184.535372 1.22646342 1.069669694 1.250602474 1.331337045 1.277375433 1.427888191 1.299325905 1.24583557 1.413925404 1 11.63686718 -5.472619622 5.973450362 1.301000275 1.14903895 0.167412802 0.116754033 0.29292292 24.50903294 0.028573052 0.059107105 3.37E-06 5.472619622 -0.151961325 EAPGS(ph)PPLSPR ddPTM_A459_MK2206_30min_R2 2 EAPGSPPLSPR 11 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;E9PNR0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 EAPGS(0.998)PPLS(0.002)PR;EAPGS(0.995)PPLS(0.005)PR 103.97 0.012757 87204000 137364 181971 174317 210450 202170 223690 196832 189356 170703 168947 TRUE FALSE 147880.6935 172934.5848 180128.6418 193255.5618 194231.79 232202.6797 170987.722 214105.4794 185550.4384 163434.2732 0.904832815 1.058129249 1.102147293 1.182466554 1.188439769 1.420771024 1.046217042 1.31004027 1.135321464 1 17.31835103 -4.867398755 1.076145829 1.201633548 0.795407203 0.352739365 0.114764216 1.549648382 1.625159336 0.035181992 0.698503278 1.36E-05 4.867398755 -0.406226345 EAPGSPPLS(ph)PR ddPTM_A459_MK2206_30min_R1 1 EAPGSPPLSPR 11 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;E9PNR0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 EAPGS(0.103)PPLS(0.897)PR 115.92 0.0060378 66664000 2942.5 3179.9 3214.5 2635.9 3718.6 3550.4 4168.2 3388.9 3194.4 2558.6 TRUE FALSE 2692.224923 2972.887932 2996.308696 2838.917475 3570.480288 3751.42058 3890.146983 3359.271205 3526.469311 2875.578684 0.936237613 1.033839883 1.041984597 0.987250841 1.241656265 1.304579353 1.352822305 1.16820702 1.226351179 1 11.4896366 -6.263213043 24.89299033 1.23532286 1.005268799 0.560031618 0.092660067 103.699113 1455395.775 0.02756468 0.03291541 5.45E-07 6.263213043 -0.230054061 EAPPPVLLT(ph)PK ddPTM_A459_MK2206_30min_R1 1 EAPPPVLLTPK 11 0 P48634;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 EAPPPVLLT(1)PK 110.15 0.021017 7002000 4620.5 5086.1 4075 3613.3 3557.7 3018.8 3691.5 3331.5 3105.3 2818.1 TRUE FALSE 4227.502212 4754.993966 3798.400354 3891.596992 3415.989275 3189.721847 3445.246771 3302.373047 3428.107047 3167.227504 1.334764303 1.50131115 1.199282448 1.228707754 1.078542439 1.007102219 1.087780012 1.042669983 1.082368426 1 11.62900479 -5.739401585 1.192334067 1.047231531 1.426687603 0.830004239 0.063041095 0.189598644 0.523921466 0.021251655 0.058486503 1.82E-06 5.739401585 0.379456073 EAPPPVLLT(ph)PK ddPTM_A459_MK2206_30min_R2 2 EAPPPVLLTPK 11 0 P48634;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 EAPPPVLLT(1)PK;EAPPPVLLT(1)PK 102.73 0.032719 12763100 185516 189672 167942 173491 168340 147938 171173 149517 137127 161016 TRUE FALSE 199719.2476 180253.1643 173541.1025 159316.2303 161730.1258 153567.8843 148697.7795 169059.3853 149054.0586 155762.0611 1.282207273 1.157234072 1.114142309 1.022817939 1.038315265 0.985913278 0.954646969 1.085369467 0.956934298 1 17.24898435 -4.604671332 0.724778157 0.998351554 1.517728226 0.857269364 0.036836344 1.244377464 0.416366823 0.01475706 0.560420621 2.49E-05 4.604671332 0.519376672 EAPS(ph)PTCPDLGAK ddPTM_A459_MK2206_30min_R1 1 EAPSPTCPDLGAK 13 0 O00257 O00257 CBX4 E3 SUMO-protein ligase CBX4 1 EAPS(0.919)PT(0.081)CPDLGAK 123.95 0.0023548 9944200 4484.4 3768.4 3099.8 3220.9 3574 3052.9 3089 3101 3013.6 2610.1 TRUE FALSE 4102.978231 3523.076475 2889.394213 3468.974276 3431.640012 3225.75256 2882.938446 3073.888284 3326.874504 2933.458893 1.398682709 1.20099739 0.984978593 1.182554248 1.169827203 1.099641303 0.982777858 1.047871607 1.134113218 1 11.51838706 -4.880716033 3.142359306 1.081650617 1.414784327 0.668451273 0.070025056 0.181203314 3.002622479 0.01863996 0.132241843 1.32E-05 4.880716033 0.33313371 EAPS(ph)PTLR ddPTM_A459_MK2206_30min_R1 2 EAPSPTLR 8 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 EAPS(0.994)PT(0.006)LR;EAPS(0.995)PT(0.005)LR 151.83 0.0010877 67938000 11397.1 11839.1 11061.8 9235.2 11283.6 10683 11993.2 9800.4 10323.3 10784.9 TRUE FALSE 10427.7168 11068.37244 10310.95584 9946.496704 10834.15032 11287.86223 11193.15551 9714.716136 11396.44398 12121.01483 0.860300638 0.913155589 0.850667702 0.820599334 0.893831949 0.931263791 0.92345036 0.801477126 0.940221931 1 13.56522287 -6.508671782 24.05899754 0.907736829 0.863276519 0.206888244 0.051123805 820.1401191 1388881.844 0.016152248 0.017622226 3.10E-07 6.508671782 -0.04446031 EAPS(ph)PTLR ddPTM_A459_MK2206_30min_R2 1 EAPSPTLR 8 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 EAPS(0.985)PT(0.015)LR 114.86 0.010127 43721000 214180 275580 271110 294930 198050 242400 247770 201670 239080 238860 TRUE FALSE 230577.7855 261895.0979 280148.6721 270833.2756 190273.5619 251624.7019 215237.5014 228028.9614 259874.7462 231066.0178 0.997887044 1.133421091 1.212418316 1.172103446 0.823459736 1.088973205 0.931497861 0.986856326 1.124677479 1 17.81794558 -6.200465579 24.99988044 0.993684859 1.135237885 0.342559425 0.092387123 270.5455273 110926.0485 0.026937765 0.0347765 6.30E-07 6.200465579 0.141553026 EAPS(ph)PTLRR ddPTM_A459_MK2206_30min_R1 2 EAPSPTLRR 9 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 EAPS(0.974)PT(0.026)LRR;EAPS(0.974)PT(0.026)LRR 90.434 0.014657 45628000 3110.7 2777 3022.5 2695.1 3090.6 2348.7 2639.4 2971.9 1791.69 2029.79 TRUE FALSE 2846.11863 2596.216795 2817.341121 2902.677069 2967.494858 2481.681364 2463.330442 2945.916992 1977.942587 2281.255709 1.247610524 1.138064788 1.234995757 1.272403202 1.300816408 1.087857601 1.079813382 1.291357641 0.867041156 1 11.15561245 -8.264347389 24.99996908 0.933520555 1.202423636 0.64107851 0.081688491 171.606395 1475247.572 0.070217756 0.021198736 5.44E-09 8.264347389 0.268903081 EAPS(ph)PTLRR ddPTM_A459_MK2206_30min_R2 2 EAPSPTLRR 9 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 EAPS(0.962)PT(0.038)LRR;EAPS(0.965)PT(0.035)LRR 84.169 0.018971 66175000 82578 129420 100300 134865 126915 141892 117358 99214 105728 107354 TRUE FALSE 88900.23517 122993.191 103643.9519 123846.0981 121931.6794 147291.7995 101948.7536 112181.6105 114924.0303 103851.0478 0.856035997 1.184323063 0.998005838 1.192535855 1.174101581 1.418298637 0.981682475 1.080216453 1.106623696 1 16.66415625 -4.754869349 24.85456078 1.132881368 0.856035493 0.301102023 0.123101618 265.3017971 1003542.862 0.03088865 0.287752884 1.76E-05 4.754869349 -0.276845876 EAPSPLMIHS(ph)PQMS(ph)QFQSLTHQSPPQQNVQPK ddPTM_A459_MK2206_30min_R2 1 EAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPK 32 0 O60885 O60885 BRD4 Bromodomain-containing protein 4 2 EAPSPLMIHS(0.988)PQMS(0.697)QFQS(0.073)LT(0.1)HQS(0.141)PPQQNVQPK 79.373 1.99E-05 6214800 10213 18993 15354 21186 19934 19035 20802 13669 12803 20537 TRUE FALSE 10994.91513 18049.83524 15865.8947 19455.03603 19151.291 19759.39026 18070.67241 15455.58523 13916.5818 19866.87937 0.5534294 0.908539026 0.79861031 0.979269852 0.963980837 0.994589532 0.909587866 0.77795737 0.700491584 1 14.27807766 -4.759666902 24.95533658 0.891346108 0.553428968 0.524084967 0.096944322 39.11647014 550572.554 0.025698472 0.160590073 1.74E-05 4.759666902 -0.337917141 EAPSPLMIHS(ph)PQMSQFQSLTHQS(ph)PPQQNVQPK ddPTM_A459_MK2206_30min_R2 1 EAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPK 32 0 O60885 O60885 BRD4 Bromodomain-containing protein 4 2 EAPS(0.211)PLMIHS(0.519)PQMS(0.145)QFQS(0.181)LT(0.408)HQS(0.535)PPQQNVQPK 55.686 0.0036001 5359500 6470 8708.2 6041.2 10271 7542 8925.4 7316.9 7243.4 8317.4 9112.5 TRUE FALSE 6965.348175 8275.763451 6242.610593 9431.826445 7245.863184 9265.062351 6356.182241 8190.13725 9040.832418 8815.159871 0.790155627 0.938810364 0.708167598 1.069955234 0.821977513 1.051037359 0.721051272 0.929096848 1.025600505 1 13.10577102 -1.522878772 0.074126212 1.108734814 0.396422556 0.138409564 0.119768696 498.6772378 2.726130695 4.310779596 36.73761801 0.029999998 1.522878772 -0.712312259 EAPSPLMIHSPQMSQFQSLTHQS(ph)PPQQNVQPK ddPTM_A459_MK2206_30min_R1 1 EAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPK 32 0 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 EAPS(0.002)PLMIHS(0.017)PQMS(0.035)QFQS(0.1)LT(0.256)HQS(0.59)PPQQNVQPK 44.844 0.012127 13932000 1273.8 1160.9 1287.2 1192.3 1542.3 1456.5 1248.2 1301.6 1158 992.39 TRUE FALSE 1165.456621 1085.325199 1199.82845 1284.131153 1480.866925 1538.965771 1164.934855 1290.220248 1278.378244 1115.334765 1.044938845 0.973093669 1.075756345 1.151341456 1.327733135 1.379824084 1.044471034 1.156800889 1.146183445 1 10.12326108 -5.677517661 2.91549144 1.190304068 1.011767852 0.265270072 0.10908524 0.324186568 5.530788793 0.032691398 0.06154423 2.10E-06 5.677517661 -0.178536216 EAQQKVPDEEENEES(ph)DNEK ddPTM_A459_MK2206_30min_R2 1 EAQQKVPDEEENEESDNEK 19 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 EAQQKVPDEEENEES(1)DNEK 89.468 0.0015987 4562600 7146.7 10953 9309.1 10292 8042.2 6740.9 9002.4 10458 4758.1 9624.5 TRUE FALSE 7693.856847 10409.08995 9619.460748 9451.110678 7726.422819 6997.429673 7820.374066 11824.89651 5171.950937 9310.453353 0.826367584 1.118000333 1.033189296 1.015107462 0.82986537 0.751567019 0.839956312 1.270066672 0.555499366 1 13.1846357 -6.248096762 23.3121594 0.880122715 1.009227429 0.096236076 0.183943171 784.0360122 1369859.713 0.053022446 0.067957056 5.65E-07 6.248096762 0.129104714 EAQQKVPDEEENEES(ph)DNEKETEK ddPTM_A459_MK2206_30min_R1 2 EAQQKVPDEEENEESDNEKETEK 23 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(1)DNEKETEK 96.633 7.98E-05 28750000 2619.2 2121.49 1973.58 2304.68 2190.08 1605.62 2518.22 2475.51 1170.88 1369.33 TRUE FALSE 2396.423286 1983.380615 1839.618888 2482.186853 2102.844476 1696.528817 2350.234139 2453.866877 1292.597166 1538.972938 1.557157521 1.288769 1.19535493 1.612885315 1.366394706 1.10237729 1.527144552 1.594483448 0.839908964 1 10.58775215 -8.270455753 24.96298879 0.919954405 1.394220871 0.571992527 0.167799186 527.8677831 1461451.749 0.15546535 0.042510646 5.36E-09 8.270455753 0.474266465 EAQQKVPDEEENEES(ph)DNEKETEK ddPTM_A459_MK2206_30min_R2 3 EAQQKVPDEEENEESDNEKETEK 23 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 EAQQKVPDEEENEES(0.999)DNEKET(0.001)EK;EAQQKVPDEEENEES(0.996)DNEKET(0.004)EK;EAQQKVPDEEENEES(1)DNEKETEK 82.859 0.0001556 125413000 180807 272327 253678 226381 234951 134536 310851 216623 161925 266433 TRUE FALSE 194649.7229 258803.6372 262135.4979 207884.9481 225725.6432 139655.8618 270035.8903 244936.3699 176008.9438 257739.313 0.755219375 1.00412946 1.017056711 0.806570584 0.875790505 0.541849282 1.047709358 0.950325998 0.682895216 1 17.97555308 -5.782688381 24.96751916 0.838795744 0.933334673 0.053967617 0.155147132 660.3396845 775894.9781 0.043722298 0.064922134 1.65E-06 5.782688381 0.094538929 EAQSFISAAIEPESGKS(ph)NER ddPTM_A459_MK2206_30min_R2 1 EAQSFISAAIEPESGKSNER 20 1 Q8WXA9;Q8WXA9-2 Q8WXA9 SREK1 Splicing regulatory glutamine/lysine-rich protein 1 1 EAQSFISAAIEPES(0.207)GKS(0.793)NER 71.857 0.0051011 3126800 7584.6 9516.2 9580.3 10379 9532.1 7168.4 9355.4 8102.9 8438.1 9456.5 TRUE FALSE 8165.282808 9043.639346 9899.70242 9531.002499 9157.821859 7441.198485 8127.024742 9161.976851 9172.030685 9147.935179 0.892582058 0.988598975 1.082178899 1.04187473 1.001080755 0.813429297 0.888399905 1.001534955 1.002633983 1 13.15923043 -6.56195669 24.99921995 0.934579946 1.008090172 0.145608021 0.071103271 284.5599516 182039.0166 0.025241299 0.025241347 2.74E-07 6.56195669 0.073510227 EAQSSQATPVQTSQPDSSNIVKVS(ph)PR ddPTM_A459_MK2206_30min_R1 1 EAQSSQATPVQTSQPDSSNIVKVSPR 26 1 H7C5E4;Q8IZH2-2;Q8IZH2 H7C5E4 XRN1 5-3 exoribonuclease 1 1 EAQSSQATPVQTSQPDS(0.257)S(0.257)NIVKVS(0.485)PR 97.106 1.87E-06 8707500 711.15 561.71 996.05 577.57 646.91 633.36 704.98 615.37 544.12 676.15 TRUE FALSE 650.6629581 525.1425769 928.4409012 622.0545415 621.1422048 669.2202959 657.9520705 609.989885 600.6832212 759.9165667 0.856229469 0.691052939 1.221766891 0.818582682 0.817382108 0.880649699 0.865821459 0.802706391 0.790459437 1 9.56969722 EAQSSQATPVQTSQPDSSNIVKVS(ph)PR ddPTM_A459_MK2206_30min_R2 3 EAQSSQATPVQTSQPDSSNIVKVSPR 26 1 H7C5E4;Q8IZH2-2;Q8IZH2 H7C5E4 XRN1 5-3 exoribonuclease 1 1 EAQSSQATPVQTSQPDS(0.043)S(0.043)NIVKVS(0.915)PR;EAQSSQATPVQTSQPDS(0.054)S(0.081)NIVKVS(0.865)PR;EAQSSQATPVQTSQPDS(0.01)S(0.044)NIVKVS(0.946)PR 146.38 5.51E-11 31607000 78044 96126 78468 96449 94119 82963 102495 76282 83912 92771 TRUE FALSE 84019.10865 91352.52262 81084.08396 88568.80817 90423.41515 86120.2151 89037.28338 86252.31932 91210.51408 89743.88987 0.936209794 1.017924705 0.903505343 0.986906276 1.007571828 0.959622045 0.992126411 0.961094058 1.016342329 1 16.4535261 -6.503234869 0.254275685 1.004575004 0.94643173 0.151898005 0.032716487 8.785313944 1.078196045 0.056636104 0.164305386 3.14E-07 6.503234869 -0.058143275 EAQTLDSQIQET(ph)SI ddPTM_A459_MK2206_30min_R1 1 EAQTLDSQIQETSI 14 0 E7EVA0;P27816-4;P27816;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 EAQTLDSQIQET(0.651)S(0.349)I 163.9 0.00061889 8467200 2412.7 2475.8 1867.5 2132.1 2226.3 2338.8 2063.3 2237.7 1825.1 1590 TRUE FALSE 2207.487195 2314.62497 1740.739303 2296.314711 2137.621757 2471.220835 1925.661022 2218.136025 2014.825676 1786.981204 1.235316404 1.295271022 0.974122895 1.285024547 1.196219497 1.382902534 1.077605639 1.241275521 1.127502445 1 10.80330874 -8.585776201 3.032343002 1.000016899 1.209113822 0.265155902 0.108624133 0.417514637 9.684924371 0.101187831 0.026935609 2.60E-09 8.585776201 0.209096922 EAQTLDSQIQET(ph)SI ddPTM_A459_MK2206_30min_R2 1 EAQTLDSQIQETSI 14 0 E7EVA0;P27816-4;P27816;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 EAQTLDSQIQET(0.5)S(0.5)I 162.67 0.00064058 4466300 24206 26219 22097 29902 21399 24445 27300 18699 22600 26105 TRUE FALSE 26059.22997 24917.00259 22833.70295 27458.91095 20558.76774 25375.2716 23715.47721 21143.0235 24565.70715 25253.19599 1.031918098 0.986687095 0.904190621 1.087343992 0.814105579 1.004834066 0.939107954 0.837241493 0.972776165 1 14.62417836 -1.522899901 0.51709089 0.931704021 4.483000874 0.106468877 0.076638265 241.677406 2.446676015 0.038944666 940.0031638 0.029998539 1.522899901 3.551296852 EAQTLDSQIQETS(ph)I ddPTM_A459_MK2206_30min_R2 1 EAQTLDSQIQETSI 14 0 E7EVA0;P27816-4;P27816;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 EAQTLDSQIQET(0.02)S(0.98)I 183.96 7.77E-05 4407900 22169 24606 22520 31902 24522 28989 31525 22506 23281 24305 TRUE FALSE 23866.27569 23384.10182 23270.80556 29295.50455 23559.14307 30092.19671 27385.72963 25447.61147 25305.9393 23511.92984 1.015070896 0.99456327 0.989744599 1.245984687 1.002008054 1.27986928 1.164758904 1.082327637 1.076302093 1 14.52110534 -5.719461455 24.99976085 1.128446591 0.99926969 0.289269033 0.087038178 171.5400232 102158.5779 0.022790889 0.039474594 1.91E-06 5.719461455 -0.1291769 EARNS(ph)WDSPAFSNDVIR ddPTM_A459_MK2206_30min_R1 1 EARNSWDSPAFSNDVIR 17 1 A0A0C4DGT3;A0A3B3IU98;A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695 A0A0C4DGT3;A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 EARNS(0.997)WDS(0.003)PAFSNDVIR 104.68 0.0015038 4231100 894.84 837.15 982.51 1158 1229.5 835.67 835.24 816.97 407.54 388.69 TRUE FALSE 818.729159 782.6513828 915.8199586 1247.189361 1180.526411 882.9849132 779.5226636 809.8273174 449.9052414 436.8438517 1.874191787 1.791604437 2.096446946 2.855000376 2.702399054 2.021282685 1.784442337 1.853814159 1.029899447 1 8.770973875 -8.025468878 1.228561246 0.953358291 2.237949412 0.649799758 0.334976206 0.323750645 0.887834223 0.347826409 0.119235464 9.43E-09 8.025468878 1.284591121 EAS(ph)PAPLAQGEPGR ddPTM_A459_MK2206_30min_R1 3 EASPAPLAQGEPGR 14 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 EAS(1)PAPLAQGEPGR;EAS(1)PAPLAQGEPGR;EAS(1)PAPLAQGEPGR 187.08 8.65E-05 30196000 5272.8 5518 5928.9 4156.6 4444 5760.4 6455.3 4471.6 5902.6 6270.2 TRUE FALSE 4824.320671 5158.777197 5526.462787 4476.742052 4266.98607 6086.54887 6024.678715 4432.505273 6516.196393 7046.999714 0.684592148 0.732052988 0.784229177 0.635269226 0.605503937 0.863707836 0.854928191 0.628991834 0.924676693 1 12.78279344 -6.776147483 24.99983428 0.831302126 0.693138537 0.396819661 0.100314083 300.4417683 510667.3492 0.035265747 0.031230714 1.67E-07 6.776147483 -0.13816359 EAS(ph)PAPLAQGEPGR ddPTM_A459_MK2206_30min_R2 3 EASPAPLAQGEPGR 14 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 EAS(1)PAPLAQGEPGR;EAS(1)PAPLAQGEPGR;EAS(1)PAPLAQGEPGR 193.98 0.00011811 61896000 98147 80222 84283 90180 82245 75811 89298 71663 67603 98384 TRUE FALSE 105661.2098 76238.29213 87092.95315 82812.00553 79015.64805 78696.04073 77573.06533 81029.60016 73482.98674 95173.73814 1.110192915 0.801043372 0.915094383 0.870114037 0.830225329 0.826867183 0.815067968 0.851386125 0.772093102 1 16.53827592 -4.755055887 24.99977718 0.848575918 1.11019335 0.609333489 0.06153497 134.8261997 527972.7463 0.01425158 0.131173556 1.76E-05 4.755055887 0.261617432 EAS(ph)PAPLAQGEPGREDLPTR ddPTM_A459_MK2206_30min_R1 2 EASPAPLAQGEPGREDLPTR 20 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 EAS(0.999)PAPLAQGEPGREDLPT(0.001)R;EAS(1)PAPLAQGEPGREDLPTR 92.8 0.00074073 149300200 4224.3 3908.2 4086.2 3107.01 3777.5 3903.5 4103.5 3470.8 4126.3 3526.4 TRUE FALSE 3865.001102 3653.77547 3808.840129 3346.312449 3627.034176 4124.512797 3829.763002 3440.455162 4555.243651 3963.277055 0.97520336 0.921907658 0.961033023 0.84432968 0.91516039 1.04068243 0.966312208 0.868083435 1.149362911 1 11.95247811 -6.73958713 24.79700948 0.994232415 0.921120677 0.23001929 0.073075565 367.1682894 416646.1171 0.023699985 0.023679912 1.82E-07 6.73958713 -0.073111738 EAS(ph)PAPLAQGEPGREDLPTR ddPTM_A459_MK2206_30min_R2 2 EASPAPLAQGEPGREDLPTR 20 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 EAS(0.868)PAPLAQGEPGREDLPT(0.132)R;EAS(0.97)PAPLAQGEPGREDLPT(0.03)R 62.005 0.013538 370340000 205780 230550 240610 233460 246570 211302 233040 202715 179635 232180 TRUE FALSE 221534.675 219101.2223 248631.8173 214385.5712 236888.4229 219343.2457 202441.5681 229210.5465 195259.3276 224603.9856 0.986334568 0.975500153 1.106978652 0.95450475 1.054693764 0.976577709 0.901326695 1.020509702 0.869349344 1 17.777024 -6.994504972 23.61739859 0.94799795 1.015114555 0.240967303 0.056923317 104.3930346 448669.9445 0.018906388 0.016611906 1.01E-07 6.994504972 0.067116604 EAS(ph)PLGSSVEPGTEEK ddPTM_A459_MK2206_30min_R1 1 EASPLGSSVEPGTEEK 16 0 A0A0J9YW69;A0A0J9YY72;A0A1W2PQQ1;Q5HYW2 A0A0J9YW69 NHSL2 NHS-like protein 2 1 EAS(0.708)PLGS(0.27)S(0.022)VEPGTEEK 237.59 1.50E-64 0 698.89 776.93 882.18 673.87 656.76 636.81 600.32 561.46 702.05 623.56 TRUE FALSE 639.4457355 726.3517158 822.3000795 725.7715842 630.5998585 672.8656319 560.2737481 556.5512144 775.0306098 700.8113204 0.912436367 1.036444039 1.173354447 1.035616239 0.89981403 0.960123805 0.799464466 0.794152717 1.105904809 1 9.452882269 -6.231804992 6.297822949 0.9115011 1.049603016 0.209540557 0.10435036 0.264535564 36.2392015 0.03177254 0.040308378 5.86E-07 6.231804992 0.138101916 EAS(ph)PLGSSVEPGTEEK ddPTM_A459_MK2206_30min_R2 2 EASPLGSSVEPGTEEK 16 0 A0A0J9YW69;A0A0J9YY72;A0A1W2PQQ1;Q5HYW2 A0A0J9YW69 NHSL2 NHS-like protein 2 1 EAS(0.985)PLGS(0.007)S(0.007)VEPGTEEK;EAS(1)PLGSSVEPGTEEK 299.31 5.83E-88 3640800 47455 44600 43497 50352 40941 33057 47024 38939 33875 41543 TRUE FALSE 51088.19129 42385.22885 44947.16827 46238.08053 39333.45063 34315.0073 40849.69231 44028.461 36821.38627 40187.45531 1.271247231 1.054688049 1.118437779 1.150560048 0.978749471 0.853873604 1.0164787 1.095577231 0.916240802 1 15.29445761 -6.26409822 24.22704215 0.977434438 1.139851804 0.540228389 0.077521545 130.9735685 1193415.481 0.024138003 0.028630882 5.44E-07 6.26409822 0.162417365 EAS(ph)PSTLNDK ddPTM_A459_MK2206_30min_R1 2 EASPSTLNDK 10 0 P54253 P54253 ATXN1 Ataxin-1 1 EAS(0.902)PS(0.093)T(0.005)LNDK;EAS(0.849)PS(0.136)T(0.014)LNDK 132.03 0.0025097 13305500 5336.9 5856.7 5394.3 4553.6 4926.5 4621.5 4717.8 5273.5 5508.8 5164.4 TRUE FALSE 4882.96863 5475.427765 5028.149945 4904.319061 4730.267073 4883.165336 4403.08417 5227.394345 6081.459473 5804.204861 0.841281234 0.94335536 0.866294362 0.844959676 0.814972453 0.841315125 0.758602474 0.900621958 1.047767889 1 12.50288273 -8.119056977 4.324024012 1.021074448 0.846769672 0.71234561 0.04487691 0.130959422 3.886691602 0.035383077 0.012434915 7.60E-09 8.119056977 -0.174304776 EAS(ph)PSTLNDK ddPTM_A459_MK2206_30min_R2 1 EASPSTLNDK 10 0 P54253 P54253 ATXN1 Ataxin-1 1 EAS(0.996)PS(0.004)T(0.001)LNDK 92.112 0.029689 0 12053 13788 13401 17948 14261 12592 13550 11780 11678 13707 TRUE FALSE 12975.78695 13103.30797 13847.78265 16481.59099 13701.04148 13071.19738 11770.86872 13319.68645 12693.73133 13259.74171 0.978585196 0.988202354 1.044347843 1.242979791 1.033281174 0.985780694 0.887714782 1.004520807 0.957313619 1 13.69476505 -6.749178584 3.916300622 0.960709456 1.064924159 0.275662856 0.074126026 0.302149113 10.20120043 0.028245588 0.026619487 1.78E-07 6.749178584 0.104214703 EAS(ph)SSEEPR ddPTM_A459_MK2206_30min_R2 1 EASSSEEPR 9 0 P30414 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 EAS(0.985)S(0.013)S(0.002)EEPR 126.39 0.0048162 2471300 14780 14027 12801 14471 16257 14065 15951 19345 18374 14195 TRUE FALSE 15911.56816 13330.43958 13227.77895 13288.67301 15618.6685 14600.25343 13856.61454 21873.45792 19972.13731 13731.81831 1.158737161 0.970770169 0.963294055 0.967728578 1.137407162 1.063242544 1.009088106 1.592903243 1.454442293 1 13.74523505 -7.742956277 24.99702272 1.392754576 1.035124766 0.451239108 0.154652764 172.0508377 232686.5318 0.069726156 0.040162955 1.81E-08 7.742956277 -0.35762981 EASQTS(ph)SSPAPK ddPTM_A459_MK2206_30min_R2 1 EASQTSSSPAPK 12 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 EAS(0.002)QT(0.333)S(0.435)S(0.015)S(0.215)PAPK 137.09 0.0013528 30216000 57690 59346 55846 60638 77728 50624 73965 69684 66282 80337 TRUE FALSE 62106.79076 56398.96394 57707.87777 55683.68143 74676.00817 52550.53179 64253.30665 78791.93806 72047.08855 77715.61027 0.799154643 0.725709594 0.742551948 0.716505748 0.96088814 0.676190171 0.826774781 1.01384957 0.927060706 1 16.24591679 -7.640797182 4.72161312 0.976653087 0.771600244 0.608755426 0.075187193 0.14320741 5.25647087 0.036538005 0.020290403 2.29E-08 7.640797182 -0.205052842 EASQTSS(ph)SPAPK ddPTM_A459_MK2206_30min_R2 1 EASQTSSSPAPK 12 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 EAS(0.002)QT(0.08)S(0.17)S(0.373)S(0.373)PAPK 138.02 0.0012757 19011000 147930 156120 142850 152780 180500 112040 177620 163700 150430 208330 TRUE FALSE 159255.6345 148367.3078 147612.5477 140297.3853 173412.6631 116303.7607 154298.2806 185096.1521 163514.1295 201532.2092 0.790224229 0.736196504 0.732451395 0.696153661 0.860471206 0.577097632 0.765625908 0.918444515 0.811354821 1 17.62065091 -8.273356816 0.989488014 0.982498976 0.733761156 0.48850631 0.080578925 0.424617096 0.865191129 0.074714601 0.02594074 5.33E-09 8.273356816 -0.248737819 EASQTSSS(ph)PAPK ddPTM_A459_MK2206_30min_R1 4 EASQTSSSPAPK 12 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 EASQT(0.001)S(0.002)S(0.01)S(0.987)PAPK;EAS(0.008)QT(0.055)S(0.055)S(0.267)S(0.616)PAPK;EASQTSS(0.007)S(0.993)PAPK;EASQTS(0.001)S(0.08)S(0.92)PAPK 230.69 5.28E-10 73141500 42313.1 42989.5 35780.5 31581.8 24485.9 22719.2 39357.1 39971.9 3045.81 26434 TRUE FALSE 38714.14865 40190.87574 33351.81935 34014.23571 23510.57475 24005.54147 36731.65967 39622.42989 3362.432849 29708.84349 1.303118671 1.352825321 1.122622608 1.14491955 0.791366206 0.808026791 1.23638807 1.333691428 0.113179527 1 14.85860482 -5.748695537 1.566036271 0.914647651 1.325243935 0.232755289 0.313651744 0.649752297 3.219676141 0.101437461 0.229789125 1.78E-06 5.748695537 0.410596284 EASQTSSS(ph)PAPK ddPTM_A459_MK2206_30min_R2 2 EASQTSSSPAPK 12 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 EAS(0.001)QT(0.046)S(0.253)S(0.076)S(0.623)PAPK;EASQT(0.004)S(0.01)S(0.091)S(0.895)PAPK 172.58 0.00021915 52130000 443460 417160 448970 433540 501000 348830 532890 452620 451890 570950 TRUE FALSE 477411.6386 396444.441 463938.4357 398118.3952 481328.2227 362104.9701 462920.9029 511778.9881 491194.5754 552319.9483 0.864375151 0.717780414 0.839981314 0.720811183 0.871466302 0.655607264 0.838139025 0.926598776 0.889329775 1 19.07514471 -7.636580693 3.842350854 0.931457337 0.777826388 0.509617836 0.069918158 0.182426139 5.031317786 0.033328935 0.018000128 2.31E-08 7.636580693 -0.153630949 EASRPPEEPSAPS(ph)PTLPAQFK ddPTM_A459_MK2206_30min_R1 3 EASRPPEEPSAPSPTLPAQFK 21 1 H0Y3X6;A0A0C4DFX9;Q9H3P2;Q9H3P2-7 H0Y3X6 NELFA Negative elongation factor A 1 EASRPPEEPSAPS(0.746)PT(0.254)LPAQFK;EASRPPEEPS(0.001)APS(0.737)PT(0.262)LPAQFK;EASRPPEEPS(0.001)APS(0.941)PT(0.058)LPAQFK 134.42 2.21E-05 153496000 14454.3 15296.6 14359.2 12147.8 14462.2 12410.5 13819.6 13798.6 11737 11151 TRUE FALSE 13224.88588 14300.78856 13384.53751 13083.42566 13886.13995 13113.17179 12897.7197 13677.96029 12957.10315 12532.47007 1.055249748 1.14109896 1.067988788 1.043962251 1.108013016 1.046335775 1.029144265 1.091401793 1.033882633 1 13.61338317 EASRPPEEPSAPS(ph)PTLPAQFK ddPTM_A459_MK2206_30min_R2 4 EASRPPEEPSAPSPTLPAQFK 21 1 H0Y3X6;A0A0C4DFX9;Q9H3P2;Q9H3P2-7 H0Y3X6 NELFA Negative elongation factor A 1 EASRPPEEPS(0.001)APS(0.988)PT(0.011)LPAQFK;EASRPPEEPS(0.001)APS(0.996)PT(0.003)LPAQFK;EASRPPEEPS(0.007)APS(0.936)PT(0.058)LPAQFK;EASRPPEEPSAPS(0.979)PT(0.021)LPAQFK 113.65 4.68E-05 108009700 186674 213451 197887 240885 199182 197510 255287 189145 176088 202275 TRUE FALSE 200965.905 202851.3337 204484.4538 221203.9249 191361.1139 205026.3815 221767.5102 213866.9009 191403.8159 195674.7833 1.027040386 1.036675908 1.045022002 1.130467203 0.977954904 1.047791534 1.133347417 1.092971191 0.978173134 1 17.57809832 -11.3460273 5.389752264 0.993865606 1.055075329 0.082484765 0.051367965 0.004206786 0.000138035 0.055257838 0.012125241 4.51E-12 11.3460273 0.061209723 EASRPPEEPSAPSPT(ph)LPAQFK ddPTM_A459_MK2206_30min_R1 1 EASRPPEEPSAPSPTLPAQFK 21 1 H0Y3X6;A0A0C4DFX9;Q9H3P2;Q9H3P2-7 H0Y3X6 NELFA Negative elongation factor A 1 EASRPPEEPS(0.017)APS(0.348)PT(0.636)LPAQFK 114.75 0.00010749 25620000 2154.4 1943.1 2003.4 1780.6 1827.7 1536.5 1898.5 1660.3 1700.8 1359.7 TRUE FALSE 1971.156967 1816.603837 1867.41479 1917.742121 1754.898839 1623.495302 1771.854529 1645.784172 1877.604246 1528.149901 1.28989765 1.188760236 1.222010215 1.254943719 1.148381345 1.062392702 1.159476912 1.076978228 1.228678054 1 10.57757035 -6.40325783 4.338876373 1.112910414 1.233608964 0.507160479 0.061735341 0.20216045 6.228137269 0.018538144 0.021007781 3.95E-07 6.40325783 0.12069855 EASRPPEEPSAPSPT(ph)LPAQFK ddPTM_A459_MK2206_30min_R2 1 EASRPPEEPSAPSPTLPAQFK 21 1 H0Y3X6;A0A0C4DFX9;Q9H3P2;Q9H3P2-7 H0Y3X6 NELFA Negative elongation factor A 1 EASRPPEEPSAPS(0.174)PT(0.826)LPAQFK 136.92 4.37E-05 80919000 54965 56280 49232 60549 60360 53748 61689 50748 46990 58402 TRUE FALSE 59173.16266 53485.21704 50873.37031 55601.95301 57989.96312 55793.4178 53589.1602 57380.93784 51077.10526 56496.34752 1.047380322 0.94670221 0.900471845 0.984168985 1.026437383 0.987557962 0.948542031 1.015657478 0.904078007 1 15.78586998 -4.751233724 24.69456267 0.968865106 1.047380511 0.250972374 0.041032105 554.3895301 1341345.999 0.010380765 0.138711557 1.77E-05 4.751233724 0.078515405 EASSS(ph)SPEAGEGQIR ddPTM_A459_MK2206_30min_R2 1 EASSSSPEAGEGQIR 15 0 J3QSS7;Q86U28-2;Q86U28 J3QSS7 ISCA2 "Iron-sulfur cluster assembly 2 homolog, mitochondrial" 1 EAS(0.01)S(0.077)S(0.517)S(0.396)PEAGEGQIR 89.231 0.01681 6556200 24473 21071 16358 24981 20400 20667 30232 31569 22946 23487 TRUE FALSE 26346.6717 20024.64478 16903.36756 22939.97239 19598.9935 21453.49717 26262.50208 35695.17669 24941.8016 22720.62111 1.159592934 0.881342314 0.74396591 1.009654282 0.862608174 0.944230224 1.155888387 1.571047575 1.097760553 1 14.47171465 -7.345964328 3.859305657 1.267118698 0.921798081 0.367077222 0.172287252 0.212164252 5.931113258 0.07375176 0.048403656 4.51E-08 7.345964328 -0.345320617 EASSSS(ph)PEAGEGQIR ddPTM_A459_MK2206_30min_R2 1 EASSSSPEAGEGQIR 15 0 J3QSS7;Q86U28-2;Q86U28 J3QSS7 ISCA2 "Iron-sulfur cluster assembly 2 homolog, mitochondrial" 1 EASS(0.001)S(0.007)S(0.992)PEAGEGQIR 120.21 0.0018186 4953200 23685 26926 24429 34521 30458 25770 33288 37071 33048 32474 TRUE FALSE 25498.34181 25588.89399 25243.45067 31700.52387 29262.06588 26750.69541 28917.24561 41916.30698 35922.4553 31414.37604 0.811677487 0.814559995 0.80356365 1.009108818 0.931486458 0.851543108 0.920509947 1.334303344 1.143503702 1 14.9391373 -7.641371302 6.795857125 1.177332582 0.875054723 0.645119722 0.095965635 0.126639551 6.995377492 0.045887853 0.026207865 2.28E-08 7.641371302 -0.302277859 EAT(ph)QARS(ph)RARGR ddPTM_A459_MK2206_30min_R1 1 EATQARSRARGR 12 3 Q86SI9-2 Q86SI9-2 2 EAT(1)QARS(1)RARGR 112.08 0.030056 16093000 191.38 161.05 434.26 130.77 290.59 226.66 179.58 291.63 210.06 174.8 TRUE FALSE 175.102126 150.5656157 404.7836411 140.8419281 279.015185 239.4932933 167.6005459 289.0803097 231.8964887 196.4555437 0.891306617 0.766410624 2.060433794 0.71691501 1.420245923 1.21907119 0.853121998 1.471479523 1.180401858 1 7.618059069 EAT(ph)SDPSRTPEEEPLNLEGLVAHR ddPTM_A459_MK2206_30min_R2 1 EATSDPSRTPEEEPLNLEGLVAHR 24 1 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7 E9PGF5 TNS1 Tensin-1 1 EAT(0.361)S(0.079)DPS(0.28)RT(0.28)PEEEPLNLEGLVAHR 93.062 1.51E-05 10287000 23942 28815 29960 29064 25065 25981 27487 23762 29211 23605 TRUE FALSE 25775.01793 27384.089 30958.85145 26689.37823 24080.82216 26969.72516 23877.92388 26867.77499 31751.71998 22834.77078 1.128761842 1.199227672 1.355776756 1.168804298 1.054568158 1.181081493 1.045682661 1.176616803 1.390498739 1 14.47894469 -5.983808627 24.96934263 1.144186205 1.231258965 0.103748662 0.113420994 563.3681928 868784.5275 0.032184713 0.047722975 1.04E-06 5.983808627 0.087072759 EATAQKPTGSVGSTVT(ph)TPPPLVR ddPTM_A459_MK2206_30min_R1 2 EATAQKPTGSVGSTVTTPPPLVR 23 1 Q86YP4-2;Q86YP4;Q86YP4-3 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 EATAQKPTGSVGS(0.002)T(0.01)VT(0.494)T(0.494)PPPLVR;EATAQKPTGSVGS(0.01)T(0.01)VT(0.49)T(0.49)PPPLVR 103.2 4.22E-05 66837000 7984.9 8119.7 8387.1 7541.7 7517.9 6416.8 6712.8 6724.6 5919.4 5309 TRUE FALSE 7305.742325 7591.106054 7817.80702 8122.563041 7218.446124 6780.113671 6265.00136 6665.807531 6534.742813 5966.719001 1.224415348 1.272241252 1.310235494 1.361311474 1.209784829 1.136321933 1.049991018 1.117164648 1.095198687 1 12.54272212 -6.72419283 2.319812286 1.07723849 1.291509714 0.833016009 0.045411778 0.120102806 1.325774161 0.017612163 0.016649923 1.89E-07 6.72419283 0.214271223 EATAQKPTGSVGSTVT(ph)TPPPLVR ddPTM_A459_MK2206_30min_R2 2 EATAQKPTGSVGSTVTTPPPLVR 23 1 Q86YP4-2;Q86YP4;Q86YP4-3 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 EATAQKPTGSVGS(0.026)T(0.103)VT(0.435)T(0.435)PPPLVR;EATAQKPTGSVGS(0.002)T(0.008)VT(0.495)T(0.495)PPPLVR 94.188 0.0001225 63428500 183207 258608 224277 265115 248210 243893 267281 205975 232200 247978 TRUE FALSE 197233.4688 245765.9028 231754.2832 243454.2564 238464.0282 253174.519 232186.6836 232896.6397 252396.3363 239886.4982 0.822194956 1.02450911 0.966099739 1.014872693 0.994070238 1.05539295 0.96790226 0.97086181 1.052148988 1 17.87199243 -4.757359694 24.999903 1.003336664 0.822194693 0.760597874 0.030769564 56.32867356 345129.9293 0.007382431 0.055181062 1.75E-05 4.757359694 -0.181141971 EATAQKPTGSVGSTVTT(ph)PPPLVR ddPTM_A459_MK2206_30min_R2 1 EATAQKPTGSVGSTVTTPPPLVR 23 1 Q86YP4-2;Q86YP4;Q86YP4-3 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 EATAQKPTGSVGS(0.002)T(0.008)VT(0.107)T(0.884)PPPLVR 89.622 0.00025774 60574000 136060 107190 116820 151170 139080 129480 153410 101120 143370 137220 TRUE FALSE 146476.8582 101867.1005 120714.7205 138818.9274 133619.0204 134407.4521 133267.0827 114336.7312 155840.0634 132742.5226 1.103465983 0.767403681 0.909389984 1.045775873 1.006602991 1.012542548 1.003951711 0.86134216 1.174002575 1 17.01827107 -5.747528326 24.32652507 1.008212205 0.910818195 0.123392594 0.104047181 315.5382272 551780.9142 0.026811532 0.046108919 1.79E-06 5.747528326 -0.097394009 EATDAIGHLDR ddPTM_A459_MK2206_30min_R1 2 EATDAIGHLDR 11 0 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 0 ; 115.92 0.0084165 9935900 16454.5 17243.7 16676.5 13888 17568.6 16528.4 17641.8 14368.9 14847.6 13473.5 FALSE TRUE 15054.95837 16121.132 15544.54564 14957.65617 16868.80546 17464.22372 16464.94771 14243.27422 16391.06115 15142.6989 0.994205753 1.064614182 1.026537326 0.987780069 1.11398936 1.153309845 1.08731923 0.94060341 1.082439878 1 13.88633474 -1.540819665 22.91205989 1.047954203 0.002219145 0 0.062665125 0 0 0.014954183 0 0.028785935 1.540819665 -1.045735058 EATDAIGHLDR ddPTM_A459_MK2206_30min_R2 4 EATDAIGHLDR 11 0 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 0 ;;; 150.09 0.00087076 40871000 283999 349125 318106 362783 333673 366167 346541 294850 311727 325028 FALSE TRUE 305742.1818 331787.9602 328711.4953 333142.4684 320571.3214 380101.7418 301039.7504 333387.9074 338840.451 314422.363 0.972393245 1.055230159 1.045445662 1.059538085 1.019556365 1.208889018 0.957437466 1.060318688 1.07766015 1 18.26234431 -4.761200603 7.492671612 1.056442691 0.971015257 0.13384051 0.061793232 0.202475851 80.66285193 0.014660883 0.087586758 1.73E-05 4.761200603 -0.085427434 EATGLS(ph)PQAAQEK ddPTM_A459_MK2206_30min_R1 3 EATGLSPQAAQEK 13 0 P17029;C9JRM9 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 1 EAT(0.337)GLS(0.663)PQAAQEK;EAT(0.001)GLS(0.999)PQAAQEK;EAT(0.018)GLS(0.982)PQAAQEK 174.62 1.15E-06 24272900 8652.6 8753.5 8501.6 7414 7230.6 7712.9 8991.4 7967.7 7600.1 8019.2 TRUE FALSE 7916.650933 8183.645559 7924.535079 7985.027565 6942.589891 8149.597733 8391.600112 7898.039239 8390.157592 9012.679038 0.878390421 0.908014756 0.879265205 0.885977136 0.770313673 0.904236986 0.931088312 0.876325364 0.930928258 1 13.1377403 -8.709683167 0.745793287 1.000504144 0.872778761 0.481325176 0.039677264 0.868719197 1.015666884 0.041648229 0.015306314 1.95E-09 8.709683167 -0.127725383 EATGLS(ph)PQAAQEK ddPTM_A459_MK2206_30min_R2 3 EATGLSPQAAQEK 13 0 P17029;C9JRM9 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 1 EAT(0.032)GLS(0.968)PQAAQEK;EAT(0.001)GLS(0.999)PQAAQEK;EAT(0.192)GLS(0.808)PQAAQEK 160.04 3.05E-05 59147000 229001 345917 313059 361116 245142 290258 393551 358384 254112 341179 TRUE FALSE 246533.4926 328739.2648 323496.2308 331611.6676 235516.4933 301303.9716 341877.281 405226.0193 276214.2024 330046.3572 0.746966259 0.99603967 0.98015392 1.004742699 0.713586102 0.912914095 1.035846249 1.22778516 0.836895171 1 18.33230915 -7.253432061 5.811450496 1.044767939 0.897570083 0.199630592 0.127822775 0.252784981 35.24126943 0.051282617 0.037282519 5.58E-08 7.253432061 -0.147197856 EATNTTSEPSAPSQDLLDLS(ph)PSPR ddPTM_A459_MK2206_30min_R1 2 EATNTTSEPSAPSQDLLDLSPSPR 24 0 I3NI44;J3KQU4;I3L4I4;O75674-2;O75674-3;O75674 I3NI44 TOM1L1 TOM1-like protein 1 1 EATNTTSEPSAPSQDLLDLS(0.909)PS(0.091)PR;EATNTTSEPSAPSQDLLDLS(0.902)PS(0.098)PR 211.78 3.75E-32 12195400 4057.9 4338.6 4452.4 4264.7 4543.1 4188 4438.42 3746.5 3504.43 3252.14 TRUE FALSE 3712.754296 4056.156351 4150.183493 4593.167933 4362.138707 4425.120941 4142.3411 3713.744745 3868.728039 3655.039656 1.015790428 1.109743459 1.1354688 1.256667059 1.193458654 1.210690268 1.133323162 1.01606141 1.05846404 1 11.83567134 -7.692133041 4.74349754 1.027625621 1.158211168 0.461519584 0.062341936 0.199577455 8.492498206 0.034286538 0.018690025 2.03E-08 7.692133041 0.130585547 EATNTTSEPSAPSQDLLDLS(ph)PSPR ddPTM_A459_MK2206_30min_R2 1 EATNTTSEPSAPSQDLLDLSPSPR 24 0 I3NI44;J3KQU4;I3L4I4;O75674-2;O75674-3;O75674 I3NI44 TOM1L1 TOM1-like protein 1 1 EATNTTSEPSAPSQDLLDLS(0.894)PS(0.106)PR 123.07 9.86E-08 2835800 8409.6 9416.2 7157.8 9064 12295 9844.9 11609 6809 7913.8 10309 TRUE FALSE 9053.445442 8948.6052 7396.43748 8323.442206 11812.23652 10219.55457 10084.72436 7698.959679 8602.128019 9972.618174 0.907830349 0.897317539 0.741674588 0.834629589 1.184466939 1.024761441 1.011241399 0.772009872 0.862574689 1 13.2837566 EATNTTSEPSAPSQDLLDLSPS(ph)PR ddPTM_A459_MK2206_30min_R1 2 EATNTTSEPSAPSQDLLDLSPSPR 24 0 I3NI44;J3KQU4;I3L4I4;O75674-2;O75674-3;O75674 I3NI44 TOM1L1 TOM1-like protein 1 1 EATNTTSEPSAPSQDLLDLS(0.093)PS(0.907)PR;EATNTTSEPSAPSQDLLDLS(0.172)PS(0.828)PR 256.31 2.07E-54 151222000 5557.2 5311.6 5424.5 4884.4 6054 5329.3 5993.9 5703.4 4950.8 4939.2 TRUE FALSE 5084.530958 4965.813875 5056.300054 5260.597334 5812.85636 5631.040361 5594.057867 5653.535775 5465.453377 5551.105385 0.915949276 0.89456307 0.910863639 0.94766663 1.047152947 1.01439983 1.007737645 1.018452251 0.984570279 1 12.43855937 -6.02945376 3.656994587 1.012680995 0.90714973 0.897426275 0.016091853 0.06638309 1.87969089 0.004894904 0.006923869 9.34E-07 6.02945376 -0.105531265 EATNTTSEPSAPSQDLLDLSPS(ph)PR ddPTM_A459_MK2206_30min_R2 2 EATNTTSEPSAPSQDLLDLSPSPR 24 0 I3NI44;J3KQU4;I3L4I4;O75674-2;O75674-3;O75674 I3NI44 TOM1L1 TOM1-like protein 1 1 EATNTTSEPSAPSQDLLDLS(0.116)PS(0.884)PR;EATNTTSEPSAPSQDLLDLS(0.17)PS(0.83)PR 204.2 2.20E-31 59394000 106817 165767 159615 189444 162214 182653 158853 114501 148685 154180 TRUE FALSE 114994.9916 157535.2518 164936.4844 173965.8192 155844.6633 189603.9879 137995.4103 129466.6738 161617.3525 149149.1192 0.771006844 1.056226498 1.105849537 1.166388512 1.04489161 1.271237731 0.925217735 0.868035122 1.083595756 1 17.18639593 -10.13798992 8.077728509 1.000042718 1.038682199 0.003162606 0.138170447 0 0 0.137387183 0.033321286 7.28E-11 10.13798992 0.038639482 EATQPEPIY(ph)AESTK ddPTM_A459_MK2206_30min_R1 3 EATQPEPIYAESTK 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 EATQPEPIY(1)AESTK;EATQPEPIY(0.998)AES(0.001)TK;EATQPEPIY(0.995)AES(0.004)T(0.001)K 216.68 1.80E-07 68613200 11585.4 11866 11567.6 9641.6 10220 9023.4 10097.5 10459.2 11084.2 10446.1 TRUE FALSE 10600.00089 11093.52124 10782.42354 10384.1977 9812.915759 9534.29711 9423.914199 10367.75632 12236.44226 11740.24173 0.902877567 0.94491421 0.918415803 0.884496073 0.835835921 0.812103986 0.802701888 0.883095643 1.042264932 1 13.51917449 -8.235420572 7.867911056 1.021226057 0.871559394 0.645110206 0.043925871 0.146948888 39.8686545 0.036588949 0.013137429 5.82E-09 8.235420572 -0.149666663 EATQPEPIY(ph)AESTK ddPTM_A459_MK2206_30min_R2 4 EATQPEPIYAESTK 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 EATQPEPIY(0.98)AES(0.016)T(0.005)K;EATQPEPIY(0.797)AES(0.162)T(0.04)K;EATQPEPIY(0.982)AES(0.014)T(0.004)K;EATQPEPIY(0.999)AES(0.001)TK 169.58 0.0024488 78773000 330346 288658 330404 277439 319492 225192 327561 217856 231871 329571 TRUE FALSE 355637.5438 274323.6635 341419.5045 254771.3462 306947.1388 233761.8394 284551.8472 246330.5272 252038.7205 318817.1253 1.115490717 0.860442058 1.070894495 0.79911437 0.962768667 0.733216069 0.892523722 0.772638945 0.790543231 1 18.2823696 -1.522883565 0.477354908 0.834777163 7.568857041 0.320128241 0.103445746 108.3208469 1.222176649 0.056282405 722.7175682 0.029999667 1.522883565 6.734079878 EATQPEPIY(ph)AESTKR ddPTM_A459_MK2206_30min_R1 2 EATQPEPIYAESTKR 15 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 EATQPEPIY(0.996)AES(0.002)T(0.002)KR;EAT(0.013)QPEPIY(0.641)AES(0.275)T(0.071)KR 103.46 0.013191 70427300 6239.3 5953 7335.3 5557.5 5834 5189.6 6335.1 5610.3 5863.1 5733.5 TRUE FALSE 5708.614771 5565.458618 6837.400273 5985.539613 5601.619426 5483.430667 5912.497038 5561.249739 6472.590226 6443.809266 0.88590685 0.863690775 1.061080487 0.928882182 0.869302488 0.850961045 0.917546872 0.863037609 1.004466451 1 12.65369808 -8.278860111 23.51520745 1.002233309 0.907089627 0.312581569 0.05758339 575.0319312 776185.9282 0.057991272 0.015149354 5.26E-09 8.278860111 -0.095143682 EATQPEPIY(ph)AESTKR ddPTM_A459_MK2206_30min_R2 5 EATQPEPIYAESTKR 15 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 EATQPEPIY(0.969)AES(0.012)T(0.019)KR;EATQPEPIY(0.698)AES(0.151)T(0.151)KR;EATQPEPIY(0.995)AES(0.002)T(0.002)KR;EATQPEPIY(0.79)AES(0.105)T(0.105)KR;EATQPEPIY(0.996)AES(0.002)T(0.002)KR 138.28 0.00067748 125259500 311123 382700 311299 373088 422100 345927 394765 268726 268194 334112 TRUE FALSE 334942.8161 363695.6745 321677.5533 342605.517 405526.2331 359091.4944 342931.8813 303849.4109 291521.0293 323209.9528 1.036301058 1.125261371 0.995258811 1.06000918 1.254683619 1.111016203 1.061018939 0.940099178 0.901955608 1 18.3021121 -7.683622404 3.686991642 0.939007619 1.098352472 0.489961851 0.068188459 0.19917035 5.282075924 0.038497758 0.020065212 2.07E-08 7.683622404 0.159344853 EATQPEPIYAES(ph)TK ddPTM_A459_MK2206_30min_R1 1 EATQPEPIYAESTK 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 EAT(0.001)QPEPIY(0.224)AES(0.745)T(0.03)K 144.4 0.00053007 5655900 1417.6 1712.2 1639.4 1303.7 1309.6 1107.9 1465.7 1363.2 1509.3 1154.1 TRUE FALSE 1297.025676 1600.735469 1528.122096 1404.1112 1257.435859 1170.628341 1367.925827 1351.281686 1666.197136 1297.078621 0.999959181 1.234108282 1.178126037 1.082518189 0.969436886 0.902511476 1.054620595 1.041788573 1.284576824 1 10.34105021 -5.969075542 5.96181522 1.03675883 1.145518817 0.133278069 0.107607299 0.33084961 34.51915092 0.031698592 0.046659153 1.07E-06 5.969075542 0.108759987 EATQPEPIYAES(ph)TKR ddPTM_A459_MK2206_30min_R1 1 EATQPEPIYAESTKR 15 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 EATQPEPIY(0.006)AES(0.896)T(0.098)KR 203.92 1.44E-05 12200000 1923.8 2194.4 2134.8 1737 1997 1931.3 1927.8 1889.9 1899.2 1898.4 TRUE FALSE 1760.170708 2051.544161 1989.895724 1870.784041 1917.455261 2040.648537 1799.199979 1873.376804 2096.628636 2133.588124 0.824981489 0.961546485 0.932652231 0.876825297 0.898699819 0.956439771 0.843274275 0.878040509 0.982677309 1 11.05906598 -8.338143525 5.396231997 0.9963268 0.899639303 0.443698987 0.042412208 0.218232006 10.89884554 0.040009286 0.010509525 4.59E-09 8.338143525 -0.096687497 EATSDPS(ph)RTPEEEPLNLEGLVAHR ddPTM_A459_MK2206_30min_R1 1 EATSDPSRTPEEEPLNLEGLVAHR 24 1 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7 E9PGF5 TNS1 Tensin-1 1 EAT(0.109)S(0.09)DPS(0.4)RT(0.4)PEEEPLNLEGLVAHR 91.166 1.99E-05 6224900 2292.6 1786.8 2068.4 1500.8 2464.2 1667.3 2384.5 2180.5 1831.2 2089.4 TRUE FALSE 2097.602331 1670.478995 1928.002771 1616.391876 2366.045696 1761.701085 2225.434356 2161.436118 2021.559793 2348.250646 0.893261686 0.711371675 0.821037896 0.688338734 1.007578003 0.750218503 0.947698815 0.920445235 0.860879053 1 11.19737069 -7.48095597 0.381108939 0.989535417 0.769195052 0.284466678 0.092260033 1.520263331 0.575938424 0.105518071 0.113707475 3.30E-08 7.48095597 -0.220340365 EATSDPS(ph)RTPEEEPLNLEGLVAHR ddPTM_A459_MK2206_30min_R2 1 EATSDPSRTPEEEPLNLEGLVAHR 24 1 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7 E9PGF5 TNS1 Tensin-1 1 EAT(0.149)S(0.149)DPS(0.512)RT(0.191)PEEEPLNLEGLVAHR 87.729 3.53E-05 10499000 11307 15070 13566 20059 10483 15034 13555 11338 12868 10548 TRUE FALSE 12172.67261 14321.64571 14018.28367 18420.11553 10071.38475 15606.1294 11775.21222 12819.91553 13987.23538 10203.81962 1.192952547 1.403557319 1.373827075 1.805217675 0.987021049 1.529439953 1.154000428 1.256383982 1.370784265 1 13.31682168 -9.983802436 0.302293834 0.869006698 1.400419011 0.198027045 0.210243567 14.03751685 1.440130797 2.120493807 0.237192838 1.04E-10 9.983802436 0.531412313 EATSDPSRT(ph)PEEEPLNLEGLVAHR ddPTM_A459_MK2206_30min_R1 2 EATSDPSRTPEEEPLNLEGLVAHR 24 1 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7 E9PGF5 TNS1 Tensin-1 1 EAT(0.013)S(0.01)DPS(0.318)RT(0.659)PEEEPLNLEGLVAHR;EAT(0.173)S(0.039)DPS(0.139)RT(0.648)PEEEPLNLEGLVAHR 156.51 8.71E-13 13409600 3111.41 2536.1 2672.28 2501.39 3437.25 2965.66 3367.03 2623.88 2807.18 2338.02 TRUE FALSE 2846.768241 2370.999429 2490.893079 2694.047491 3300.337054 3133.573106 3142.421572 2600.939694 3098.996407 2627.671569 1.083380539 0.902319551 0.947946885 1.025260357 1.255992984 1.192528451 1.195895868 0.989826782 1.179369767 1 11.35956925 -6.041155989 8.227355887 1.141146311 0.972838441 0.393428824 0.089958477 0.300642391 56.06117257 0.026545922 0.034777588 9.10E-07 6.041155989 -0.168307871 EATSDPSRT(ph)PEEEPLNLEGLVAHR ddPTM_A459_MK2206_30min_R2 1 EATSDPSRTPEEEPLNLEGLVAHR 24 1 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7 E9PGF5 TNS1 Tensin-1 1 EAT(0.048)S(0.048)DPS(0.182)RT(0.722)PEEEPLNLEGLVAHR 63.893 0.0019107 1900700 4269.5 6142.4 6491.3 6451.9 5868.6 6388.1 6553.5 5289.6 6353.7 6226.5 TRUE FALSE 4596.376203 5837.377348 6707.716702 5924.759131 5638.169277 6631.203622 5693.017578 5980.968882 6906.333341 6023.329815 0.763095554 0.969127962 1.113622682 0.983635184 0.936055214 1.100919894 0.94516119 0.99296719 1.14659724 1 12.55634554 -4.793356559 3.7170618 1.023025559 0.738962559 0.573539133 0.06812856 0.177993707 4.290637598 0.016788947 0.136859778 1.61E-05 4.793356559 -0.284063 EATTDFTVDSRPLTQVGGDHIK ddPTM_A459_MK2206_30min_R2 1 EATTDFTVDSRPLTQVGGDHIK 22 1 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 0 115.2 2.68E-05 9993900 34387 39774 34996 48755 39683 46464 45751 38116 36107 37535 FALSE TRUE 37019.69516 37798.881 36162.74917 44771.56054 38124.84603 48232.22008 39743.83874 43097.89207 39247.52159 36310.23602 1.019538819 1.040997943 0.995938147 1.233028629 1.049975164 1.328336727 1.094562941 1.186935057 1.080894147 1 15.14808869 -5.744243802 24.99998559 1.14920867 1.021042224 0.267176113 0.090183261 292.1664006 424766.2797 0.022812091 0.03938918 1.80E-06 5.744243802 -0.128166445 EAVAPVQEES(ph)DLEK ddPTM_A459_MK2206_30min_R2 2 EAVAPVQEESDLEK 14 0 E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E9PGG1;E7ETL8;E7ESD3;E7EMU4;Q13409;Q13409-7;Q13409-5;E7ET01;E7ERR6;E7EUM4;E7ERH4;E7EU01 E7EQL5 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 EAVAPVQEES(1)DLEK;EAVAPVQEES(1)DLEK 172.93 0.00011362 6693600 33422 33806 31952 32088 33399 22942 35966 28567 27098 41778 TRUE FALSE 35980.81402 32127.2432 33017.26373 29466.30776 32087.58744 23815.07389 31243.621 32300.80499 29454.93506 40414.78728 0.890288343 0.794937827 0.816959978 0.729097188 0.793956609 0.589266343 0.773073993 0.799232339 0.728815788 1 15.30259563 -10.56655678 5.282395467 1.000001707 0.765982632 0.468077236 0.074025627 1.86E-06 3.36E-07 0.073423046 0.017807546 2.71E-11 10.56655678 -0.234019075 EAVIT(ph)PVASATQSVSR ddPTM_A459_MK2206_30min_R1 4 EAVITPVASATQSVSR 16 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 EAVIT(1)PVASATQSVSR;EAVIT(0.998)PVAS(0.001)ATQSVSR;EAVIT(1)PVASATQSVSR;EAVIT(1)PVASATQSVSR 225.17 2.99E-11 202829000 20562.3 19746.4 20682.3 17808.6 21394.6 18706 21282.9 18862.6 18708.6 18005.3 TRUE FALSE 18813.36841 18460.90577 19278.4431 19180.22146 20542.40778 19765.11755 19863.15657 18697.68628 20653.42592 20235.9325 0.929701085 0.912283423 0.952683703 0.947829879 1.015145103 0.976733716 0.981578515 0.923984416 1.020631292 1 14.30463171 -5.735812368 1.857604007 0.981270679 0.922581479 0.45981524 0.02689393 0.323292457 2.26941384 0.00816634 0.017124327 1.84E-06 5.735812368 -0.0586892 EAVIT(ph)PVASATQSVSR ddPTM_A459_MK2206_30min_R2 4 EAVITPVASATQSVSR 16 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 EAVIT(0.95)PVAS(0.017)AT(0.028)QS(0.002)VS(0.003)R;EAVIT(1)PVASATQSVSR;EAVIT(0.984)PVAS(0.008)AT(0.008)QSVSR;EAVIT(0.476)PVAS(0.476)AT(0.041)QS(0.005)VS(0.001)R 150.92 0.00050528 205574100 162751 192933 178529 207928 211403 197411 206288 150288 183346 179219 TRUE FALSE 175211.3417 183352.2278 184481.0678 190939.6173 203102.256 204923.6139 179202.1378 169931.1576 199293.1037 173371.0987 1.010614474 1.057570894 1.064082013 1.101334759 1.171488544 1.181994089 1.033633282 0.980158509 1.149517452 1 17.40350389 -11.29684178 7.293768748 0.998123283 1.083571887 0.130600043 0.064534865 0.002158054 6.69E-05 0.068469171 0.016257409 5.05E-12 11.29684178 0.085448604 EAVTHIGR ddPTM_A459_MK2206_30min_R1 1 EAVTHIGR 8 0 D6RBW1;P06730;P06730-3;P06730-2 D6RBW1 EIF4E Eukaryotic translation initiation factor 4E 0 178.99 0.0004576 3658200 5508.2 5858.7 5779.2 5078.4 5959.7 5605.3 6461.3 5613.3 3229.1 4282.9 FALSE TRUE 5039.698665 5477.297565 5386.924006 5469.539248 5722.312529 5922.667242 6030.278466 5564.22351 3564.7765 4813.497986 1.046992993 1.137903782 1.119128754 1.136291999 1.188805427 1.230428944 1.252785081 1.155962571 0.740579203 1 12.23286997 -8.243224179 24.07679427 0.870289647 1.162341451 0.676020105 0.079784052 242.4214417 320433.5236 0.054090728 0.020343724 5.71E-09 8.243224179 0.292051804 EAVVDLHADDS(ph)RISEDETER ddPTM_A459_MK2206_30min_R1 1 EAVVDLHADDSRISEDETER 20 1 Q9UKV3-5;G3V3T3 Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 EAVVDLHADDS(0.678)RIS(0.305)EDET(0.017)ER 149.19 9.38E-06 35550000 1547.8 1279.2 1449.4 1178.2 1479.3 1189.2 1795 1233.9 1413.6 1389.7 TRUE FALSE 1416.151482 1195.923847 1351.018766 1268.945168 1420.376349 1256.531476 1675.258825 1223.112142 1560.548779 1561.866528 0.906704547 0.765701695 0.865002702 0.812454295 0.909409558 0.80450631 1.072600504 0.783109261 0.999156299 1 10.60905546 -7.216242154 24.99996701 0.94564262 0.84290479 0.335060108 0.081053977 553.3921174 306098.3625 0.028935419 0.022413154 6.08E-08 7.216242154 -0.10273783 EAVVDLHADDS(ph)RISEDETER ddPTM_A459_MK2206_30min_R2 1 EAVVDLHADDSRISEDETER 20 1 Q9UKV3-5;G3V3T3 Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 EAVVDLHADDS(0.492)RIS(0.453)EDET(0.056)ER 91.733 0.00082594 18831000 10418 11220 8975.8 11739 11666 12008 12755 8262.4 9550.6 11781 TRUE FALSE 11215.61009 10662.83112 9275.048692 10779.88615 11207.93422 12464.97285 11080.25318 9342.324049 10381.29392 11396.58693 0.984120084 0.935616178 0.813844421 0.945887239 0.983446561 1.09374613 0.972243115 0.819747535 0.910912538 1 13.47631421 -4.758395603 22.96471683 0.939226439 0.984120244 0.024788982 0.078402945 162.228256 1223328.142 0.021358318 0.143937668 1.74E-05 4.758395603 0.044893805 EAVVDLHADDSRIS(ph)EDETER ddPTM_A459_MK2206_30min_R1 3 EAVVDLHADDSRISEDETER 20 1 Q9UKV3-5;G3V3T3 Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 EAVVDLHADDS(0.131)RIS(0.829)EDET(0.04)ER;EAVVDLHADDS(0.066)RIS(0.885)EDET(0.048)ER;EAVVDLHADDS(0.122)RIS(0.588)EDET(0.29)ER 155.54 1.00E-06 68931000 5362.9 5247.4 4974.7 3892.9 4752.4 4526.3 5701.7 4478.7 5154.3 5858.4 TRUE FALSE 4906.757193 4905.793306 4637.031224 4192.731833 4563.101845 4782.575194 5321.349996 4439.543198 5690.10793 6584.182821 0.745234045 0.74508765 0.704268297 0.636788489 0.693039967 0.72637339 0.808202041 0.674273986 0.864208678 1 12.68478868 -8.506663524 3.277678922 0.999433521 0.717389504 0.809465698 0.044186696 0.092501699 2.437754475 0.045152313 0.011976041 3.11E-09 8.506663524 -0.282044017 EAVVDLHADDSRIS(ph)EDETER ddPTM_A459_MK2206_30min_R2 3 EAVVDLHADDSRISEDETER 20 1 Q9UKV3-5;G3V3T3 Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 EAVVDLHADDS(0.025)RIS(0.558)EDET(0.416)ER;EAVVDLHADDS(0.208)RIS(0.783)EDET(0.009)ER;EAVVDLHADDS(0.316)RIS(0.675)EDET(0.009)ER 171.29 8.55E-10 147385000 140845 158791 145264 185891 136968 159556 209496 127868 129045 173189.5 TRUE FALSE 151628.2015 150905.6698 150107.0293 170703.1107 131589.9481 165628.0154 181988.9236 144580.7866 140269.1008 167538.3408 0.905035831 0.900723196 0.895956284 1.018889825 0.785431845 0.988597682 1.086252393 0.862971341 0.837235824 1 17.35413177 EAVVDLHADDSRISEDET(ph)ERNGDDGTHDK ddPTM_A459_MK2206_30min_R2 2 EAVVDLHADDSRISEDETERNGDDGTHDK 29 2 Q9UKV3-5;G3V3T3 Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 EAVVDLHADDS(0.124)RIS(0.151)EDET(0.716)ERNGDDGT(0.009)HDK;EAVVDLHADDS(0.269)RIS(0.269)EDET(0.429)ERNGDDGT(0.033)HDK 55.526 0.004017 21767900 33421 48736 49469 60179 48316 47527 50178 37823 44994 44335 TRUE FALSE 35979.73746 46315.84111 51118.27177 55262.1832 46418.87107 49335.67329 43589.56833 42766.59597 48907.49679 42888.35258 0.838916286 1.079916535 1.191891707 1.288512612 1.082318818 1.15032801 1.016349794 0.99716108 1.140344496 1 15.38829828 -7.267474061 24.61951583 1.038227265 1.11537689 0.072266561 0.113968033 1135.367139 4631893.079 0.04937852 0.034269884 5.40E-08 7.267474061 0.077149625 EAWPHIK ddPTM_A459_MK2206_30min_R1 1 EAWPHIK 7 0 P52209-2;P52209;K7EM49;K7EMN2;K7EPF6 P52209-2 PGD "6-phosphogluconate dehydrogenase, decarboxylating" 0 94.407 0.034359 11906000 7842.7 8812.6 8992.7 7717.5 9895 8333.6 8698.4 9033.9 7857.1 6924.2 FALSE TRUE 7175.637181 8238.898138 8382.300579 8311.903187 9500.861197 8805.44123 8118.145607 8954.917565 8673.873662 7782.022171 0.922078738 1.058709158 1.077136558 1.068090402 1.220873057 1.131510684 1.0431923 1.150718588 1.11460408 1 12.92592938 -4.01298094 1.053569574 1.112252544 0.268468031 0.462188951 0.057733926 6.516680482 1.820343502 0.017875135 9.109708272 9.71E-05 4.01298094 -0.843784513 EAYPEEAYIADLDAK ddPTM_A459_MK2206_30min_R2 2 EAYPEEAYIADLDAK 15 0 P53396;P53396-2 P53396 ACLY ATP-citrate synthase 0 ; 204.48 8.69E-05 5634100 48264 52400 54873 56985 49389 47375 61285 45584 44148 54561 FALSE TRUE 51959.12895 49797.8922 56702.43843 52329.14321 47449.7397 49177.88882 53238.20588 51541.98531 47987.91324 52780.67904 0.984434643 0.943487145 1.074302936 0.991445055 0.898998281 0.931740359 1.008668453 0.976531304 0.909194692 1 15.68772229 -6.023546001 24.68952741 0.953762847 1.001325775 0.191409359 0.044830407 1094.80152 1147970.789 0.01359699 0.017670339 9.47E-07 6.023546001 0.047562928 EAYPGDVFYLHSR ddPTM_A459_MK2206_30min_R1 2 EAYPGDVFYLHSR 13 0 P25705-2;P25705-3;P25705 P25705-2 ATP5A1 "ATP synthase subunit alpha, mitochondrial" 0 ; 127.78 0.0026594 11276000 7470.3 7219.6 7002.7 6970.3 7172.5 6884 7499.7 7111.7 6131 6211.1 FALSE TRUE 6834.911757 6749.602728 6527.376235 7507.153714 6886.804137 7273.766131 6999.408697 7049.523157 6768.33939 6980.577959 0.979132644 0.966911732 0.935076762 1.075434406 0.986566467 1.042000558 1.00269759 1.009876718 0.969595846 1 12.76913077 -5.729980985 24.99987647 1.012485752 0.961027521 0.395948641 0.029392856 198.6509519 157865.8246 0.007670301 0.013283592 1.86E-06 5.729980985 -0.051458231 EAYPGDVFYLHSR ddPTM_A459_MK2206_30min_R2 2 EAYPGDVFYLHSR 13 0 P25705-2;P25705-3;P25705 P25705-2 ATP5A1 "ATP synthase subunit alpha, mitochondrial" 0 ; 142.85 0.0010587 13297300 52171 56812 58682 57385 56728 59035 63429 41564 80141 50167 FALSE TRUE 56165.25187 53990.79869 60638.42859 52696.46193 54500.57368 61281.61829 55100.69611 46996.55751 87111.51932 48530.0549 1.157329247 1.112522926 1.249502576 1.085852098 1.123027242 1.262756006 1.135393237 0.968401079 1.795001458 1 15.56659087 -8.214203774 24.9998223 1.397506513 1.141780274 0.223526253 0.194147319 482.749897 255499.8314 0.118707538 0.044866961 6.11E-09 8.214203774 -0.255726238 EAYSGCSGPVDSECPPPPS(ph)SPVHK ddPTM_A459_MK2206_30min_R1 1 EAYSGCSGPVDSECPPPPSSPVHK 24 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 EAYSGCSGPVDSECPPPPS(0.869)S(0.131)PVHK 205.24 1.36E-31 151490000 6036.9 5786 6157 5481.6 5724.7 5741.1 5980.3 5715.4 4990.5 4978.7 TRUE FALSE 5523.429954 5409.330348 5739.079994 5903.793782 5496.673077 6066.156121 5581.365099 5665.43086 5509.280334 5595.498943 0.987120185 0.966728866 1.025660098 1.055096934 0.982338328 1.084113532 0.997474069 1.012497888 0.984591435 1 12.45005106 -5.265095782 24.54025966 1.019887058 0.976924524 0.221756333 0.030354789 306.5466683 2057437.357 0.007683119 0.017056657 5.43E-06 5.265095782 -0.042962534 EAYSGCSGPVDSECPPPPSS(ph)PVHK ddPTM_A459_MK2206_30min_R1 4 EAYSGCSGPVDSECPPPPSSPVHK 24 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 EAYSGCSGPVDSECPPPPS(0.21)S(0.79)PVHK;EAYSGCSGPVDSECPPPPS(0.252)S(0.748)PVHK;EAYSGCSGPVDSECPPPPS(0.197)S(0.803)PVHK;EAYSGCSGPVDSECPPPPS(0.187)S(0.813)PVHK 190.92 1.32E-26 144138000 7925.54 8066.68 8223.63 6165.41 6700.8 6425.74 6777.44 6621.78 6528.43 6017.69 TRUE FALSE 7251.431204 7541.537666 7665.432908 6640.270946 6433.892947 6789.559846 6325.329344 6563.886476 7207.083661 6763.206868 1.07218829 1.115083098 1.133402106 0.981822836 0.951308022 1.003896521 0.935255932 0.970528716 1.065631113 1 12.72349177 -5.768414161 24.99987334 0.982763258 1.107710363 0.698651058 0.036033309 81.72122684 292916.3939 0.010148007 0.015424336 1.70E-06 5.768414161 0.124947106 EAYSGCSGPVDSECPPPPSS(ph)PVHK ddPTM_A459_MK2206_30min_R2 4 EAYSGCSGPVDSECPPPPSSPVHK 24 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 EAYSGCSGPVDSECPPPPS(0.253)S(0.747)PVHK;EAYSGCSGPVDSECPPPPS(0.228)S(0.772)PVHK;EAYSGCSGPVDSECPPPPS(0.23)S(0.77)PVHK;EAYSGCSGPVDSECPPPPS(0.251)S(0.749)PVHK 190.33 1.49E-26 722590000 333828 382605 349472 408328 439383 333570 431703 327292 314664 353889 TRUE FALSE 359386.1284 363605.3921 361123.2221 374966.2962 422130.6157 346264.2401 375019.8775 370070.1882 342032.9059 342341.6309 1.049787978 1.062112695 1.05486213 1.095298563 1.233068308 1.011458172 1.095455077 1.080996743 0.999098196 1 18.38507722 -8.249702566 5.259028647 0.998142453 1.087023655 0.280568384 0.054983839 0.221314482 20.51269799 0.044977253 0.014378769 5.63E-09 8.249702566 0.088881202 ECDS(ph)DDNMGAK ddPTM_A459_MK2206_30min_R2 4 ECDSDDNMGAK 11 0 Q9Y4E5;Q9Y4E5-2 Q9Y4E5 ZNF451 Zinc finger protein 451 1 ECDS(1)DDNMGAK;ECDS(1)DDNMGAK;ECDS(1)DDNMGAK;ECDS(1)DDNMGAK 181.76 4.03E-05 22847100 102262 85981 82016 97219 84997 68625 98610 80191 64179 96754 TRUE FALSE 110091.2573 81711.30857 84750.37251 89275.89671 81659.5907 71236.57246 85662.38855 90672.23904 69761.17341 93596.9249 1.17622729 0.873012748 0.905482446 0.953833652 0.872460188 0.761099497 0.915226527 0.96875233 0.745336169 1 16.51417351 -4.759842485 24.99937119 0.886327026 1.176227648 0.548330844 0.078361122 30.57813821 478548.9577 0.018913643 0.116621864 1.74E-05 4.759842485 0.289900622 ECEEEAINIQSTAPEEEHES(ph)PR ddPTM_A459_MK2206_30min_R1 1 ECEEEAINIQSTAPEEEHESPR 22 0 P46939;P46939-2 P46939 UTRN Utrophin 1 ECEEEAINIQSTAPEEEHES(1)PR 135.13 1.18E-05 13402000 3289.9 3456.9 3995.6 2162.6 2703.8 3367.5 4799.7 3631.2 4293.4 5296.6 TRUE FALSE 3010.076729 3231.855182 3724.389804 2329.163827 2596.101921 3558.16494 4479.520771 3599.452801 4739.714294 5952.782795 0.505658754 0.542915019 0.625655249 0.391273108 0.436115681 0.597731357 0.752508688 0.60466725 0.796218249 1 12.53934854 -8.34950494 0.601141674 1.000999002 0.503265761 0.774933034 0.081984371 0.396972934 0.34305472 0.090163458 0.041283637 4.47E-09 8.34950494 -0.497733241 ECEEEAINIQSTAPEEEHES(ph)PR ddPTM_A459_MK2206_30min_R2 2 ECEEEAINIQSTAPEEEHESPR 22 0 P46939;P46939-2 P46939 UTRN Utrophin 1 ECEEEAINIQSTAPEEEHES(1)PR;ECEEEAINIQS(0.001)TAPEEEHES(0.999)PR 182.32 1.15E-16 37801000 96231 103470 109893 131346 96578 100157 118763 91442 89456 115933 TRUE FALSE 103598.5193 98331.83026 113556.7778 120614.6116 92785.86245 103968.5448 103169.2754 103393.7834 97236.72118 112150.1157 0.923748662 0.876787595 1.012542672 1.075474696 0.827336306 0.927048039 0.919921257 0.921923109 0.867022923 1 16.77507158 -6.277970805 24.9640182 0.907932375 0.968213669 0.179494258 0.064153333 1524.761435 2302528.78 0.020605195 0.023429753 5.27E-07 6.277970805 0.060281294 ECELS(ph)PGVNR ddPTM_A459_MK2206_30min_R2 1 ECELSPGVNR 10 0 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;H7C3A1 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 ECELS(1)PGVNR 82.494 0.042483 5715200 24259 29909 20009 34188 26120 52551 23773 22188 34781 21638 TRUE FALSE 26116.28769 28423.76255 20676.09007 31394.73104 25094.39756 54550.86513 20651.57654 25088.04778 37806.18851 20931.95383 1.247675583 1.357912538 0.987776403 1.499847138 1.198855958 2.606104789 0.986605298 1.198552605 1.806147138 1 14.35341936 -5.79989527 23.97893197 1.494936062 1.213800567 0.067906266 0.456447546 289.9996523 180825.8346 0.128252226 0.190234682 1.59E-06 5.79989527 -0.281135495 ECINAAPDS(ph)PSK ddPTM_A459_MK2206_30min_R1 3 ECINAAPDSPSK 12 0 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 ECINAAPDS(0.772)PS(0.228)K;ECINAAPDS(0.994)PS(0.006)K;ECINAAPDS(0.89)PS(0.11)K 209.6 6.90E-06 148387000 22173.6 25870.5 24705 19319 16265.4 16391.5 20860.3 17224.4 23436.7 22258.8 TRUE FALSE 20287.61888 24186.32575 23028.09343 20806.95273 15617.51468 17319.57256 19468.74745 17073.80889 25873.02883 25016.38819 0.81097314 0.966819253 0.920520311 0.831732885 0.624291347 0.692329062 0.77823974 0.682504955 1.034243178 1 14.61058589 -5.970456948 6.364272857 0.774905911 0.902610501 0.079297578 0.129953239 0.320077028 41.00511158 0.036277673 0.053371435 1.07E-06 5.970456948 0.12770459 ECINAAPDS(ph)PSK ddPTM_A459_MK2206_30min_R2 3 ECINAAPDSPSK 12 0 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 ECINAAPDS(0.615)PS(0.385)K;ECINAAPDS(0.637)PS(0.363)K;ECINAAPDS(0.99)PS(0.01)K 195.23 0.00015477 226404000 422760 407210 412770 379082 372388 304549 456590 344289 289029 430210 TRUE FALSE 455126.8306 386988.5435 426531.5458 348109.788 357766.176 316138.8256 396639.1845 389288.7544 314168.22 416172.2829 1.093601975 0.929875822 1.024891765 0.836455964 0.859658826 0.759634504 0.953064874 0.935402886 0.754899432 1 18.66682136 -5.758210169 24.996437 0.866879601 1.007498479 0.389029009 0.082828026 86.51608632 669683.1647 0.022128938 0.036384551 1.74E-06 5.758210169 0.140618878 ECINAAPDSPS(ph)K ddPTM_A459_MK2206_30min_R1 1 ECINAAPDSPSK 12 0 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 ECINAAPDS(0.311)PS(0.689)K 135.61 0.0014755 57384000 12597 14872 15024 11455 9843.4 9821.9 11882 10403 14293 14377 TRUE FALSE 11525.559 13903.8301 14004.21274 12337.26608 9451.316534 10378.00749 11089.37346 10312.04767 15778.8085 16158.1313 0.713297769 0.86048503 0.866697546 0.763532976 0.584926336 0.642277705 0.686302967 0.638195561 0.97652434 1 13.97997274 -8.275484937 23.36014995 0.988262424 0.722379014 0.604309264 0.086977342 294.0810634 489095.5082 0.094152373 0.024905906 5.30E-09 8.275484937 -0.265883411 ECINAAPDSPS(ph)K ddPTM_A459_MK2206_30min_R2 1 ECINAAPDSPSK 12 0 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 ECINAAPDS(0.285)PS(0.715)K 162.64 0.00049339 134820000 76362 67398 71999 60344 63176 43995 71967 60863 48866 71612 TRUE FALSE 82208.33343 64051.11333 74399.41072 55413.70217 60695.39281 45669.26055 62517.64645 68818.00307 53116.27635 69275.3063 1.186690291 0.924587948 1.073967258 0.799905553 0.876147592 0.659242997 0.902452112 0.993398756 0.766741848 1 16.08005356 -3.93800372 0.794071944 0.85737114 2.066255592 0.403188622 0.113208909 8.50504932 1.541847686 0.041254136 12.44772447 0.000115344 3.93800372 1.208884452 ECLPLIIFLR ddPTM_A459_MK2206_30min_R1 2 ECLPLIIFLR 10 0 P62701 P62701 RPS4X "40S ribosomal protein S4, X isoform" 0 ; 171.53 0.0023791 7329800 2759.2 2742 2807.7 2780.81 2334.27 2349.42 2370.63 2531.93 1753.66 2073.39 FALSE TRUE 2524.515551 2563.495302 2617.121147 2994.988468 2241.291083 2482.44213 2212.489598 2509.793603 1935.959233 2330.257206 1.083363478 1.100091138 1.123103982 1.285260897 0.961821329 1.065308209 0.949461541 1.077045742 0.83079208 1 11.18627349 -6.295484345 24.98717908 0.987255089 1.142761019 0.49936513 0.081801225 547.4329878 401784.837 0.024743888 0.028058175 5.06E-07 6.295484345 0.15550593 ECLS(ph)LDPEER ddPTM_A459_MK2206_30min_R2 2 ECLSLDPEER 10 0 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 ECLS(1)LDPEER;ECLS(1)LDPEER 119.03 0.0055279 13705600 158121 105946 132346 146123 107932 102624 154522 106410 78222 167150 TRUE FALSE 170226.8653 100684.8757 136758.3496 134184.2835 103694.0474 106529.4282 134233.0758 120318.1524 85025.60817 161695.9092 1.052759258 0.622680414 0.84577495 0.829855772 0.641290481 0.658825747 0.830157525 0.7441014 0.525836483 1 17.30292365 -4.74780543 24.775194 0.7389242 1.052760128 0.332951891 0.130791311 699.5266999 1271075.803 0.031009602 0.598414701 1.79E-05 4.74780543 0.313835928 ECPDQLGPS(ph)PK ddPTM_A459_MK2206_30min_R1 4 ECPDQLGPSPK 11 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 ECPDQLGPS(1)PK;ECPDQLGPS(1)PK;ECPDQLGPS(1)PK;ECPDQLGPS(1)PK 126.1 0.0032237 32269600 12208.6 13335.7 12331.4 10268.4 11052.6 9457.9 10983.2 9835.9 11360.7 10538.8 TRUE FALSE 11170.19446 12467.54351 11494.37893 11059.27395 10612.35154 9993.398125 10250.53077 9749.905763 12541.68542 11844.42611 0.943076039 1.052608492 0.970446252 0.933711253 0.895978534 0.843721598 0.865430767 0.82316405 1.058868138 1 13.53192068 -5.808278421 2.45524381 0.900488621 0.999645672 0.161576935 0.071975352 0.3983578 4.894667447 0.021053488 0.037211232 1.55E-06 5.808278421 0.099157051 ECPDQLGPS(ph)PK ddPTM_A459_MK2206_30min_R2 4 ECPDQLGPSPK 11 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 ECPDQLGPS(1)PK;ECPDQLGPS(1)PK;ECPDQLGPS(1)PK;ECPDQLGPS(1)PK 165.78 0.0006326 49148300 223379 203070 215221 184365 187664 129777 227985 174552 138210 228870 TRUE FALSE 240481.068 192985.8391 222396.3607 169301.7897 180295.3684 134715.7547 198050.2956 197366.5457 150231.256 221401.9906 1.08617392 0.871653586 1.004491243 0.764680522 0.814334902 0.608466773 0.894528071 0.891439798 0.678545191 1 17.75630867 -5.760416199 24.9999964 0.798531462 0.975861011 0.333306093 0.115845434 31.05017789 758624.8715 0.03098618 0.049989945 1.74E-06 5.760416199 0.177329549 ECPSDECGAGVFMASHFDR ddPTM_A459_MK2206_30min_R1 2 ECPSDECGAGVFMASHFDR 19 0 P62979;A0A2R8Y422 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 0 ; 235.75 1.17E-24 39238000 4972.3 5301.3 4990.9 3858.1 5742.1 4908.8 5389.1 4496.5 4023.7 4410.3 FALSE TRUE 4549.379774 4956.184406 4652.131613 4155.25153 5513.379998 5186.732014 5029.602972 4457.187575 4441.978014 4956.68126 0.917827783 0.999899761 0.938557751 0.838313241 1.112312797 1.046412255 1.014711802 0.899228201 0.896159705 1 12.27515877 -1.544690787 24.67490164 0.967769603 0.004851979 0 0.078284408 0 0 0.018807697 0 0.028530489 1.544690787 -0.962917623 ECPSDECGAGVFMASHFDR ddPTM_A459_MK2206_30min_R2 4 ECPSDECGAGVFMASHFDR 19 0 P62979;A0A2R8Y422 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 0 ;;; 164.97 1.64E-07 23089100 85261 103526 100849 115523 105204 101162 103770 79589 97639 92100 FALSE TRUE 91788.64771 98385.04938 104211.2553 106084.4014 101073.1624 105011.7908 90144.87435 89991.55557 106131.4637 89094.78454 1.030235924 1.104273947 1.169667292 1.190691486 1.134445331 1.178652503 1.01178621 1.010065359 1.191219714 1 16.44305336 -7.260990586 24.99999618 1.054106601 1.137408068 0.26648849 0.066054205 58.51426628 3259664.467 0.026830239 0.019477819 5.48E-08 7.260990586 0.083301468 ECREPELGLEELLR ddPTM_A459_MK2206_30min_R1 1 ECREPELGLEELLR 14 1 Q9NZL4-2;Q9NZL4;Q9NZL4-3 Q9NZL4-2 HSPBP1 Hsp70-binding protein 1 0 116.19 0.0045875 0 790.96 761.92 660.93 611.05 764.84 578.53 744.67 709.79 624.5 431.44 FALSE TRUE 723.6846985 712.3188695 616.0679131 658.1131769 734.3748032 611.2858686 694.994423 703.5843809 689.4190098 484.8900444 1.492471761 1.469031748 1.270531165 1.357242089 1.514518212 1.260669044 1.43330314 1.451018409 1.421804835 1 8.921513823 -11.07272498 3.045593347 0.982770438 1.404943677 0.687084665 0.082549257 26244240.13 28968493.14 3688531.355 0.020399442 8.46E-12 11.07272498 0.42217324 ECS(ph)PTSSLER ddPTM_A459_MK2206_30min_R1 2 ECSPTSSLER 10 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 ECS(0.976)PT(0.01)S(0.01)S(0.003)LER;ECS(0.433)PT(0.124)S(0.433)S(0.01)LER 152.69 0.00062396 65680000 9455.5 10366 9715.1 8857 10201.3 9447.7 10203.6 8810.9 8244.1 8723.1 TRUE FALSE 8651.260072 9691.171516 9055.66608 9539.167675 9794.960619 9982.620609 9522.936462 8733.86723 9101.103697 9803.783484 0.882440956 0.988513417 0.92369095 0.973008807 0.999100055 1.018241644 0.9713532 0.890867005 0.928325652 1 13.25912291 -4.750795454 24.97168367 0.96423637 0.882440782 0.301807099 0.038006105 653.4567642 1532971.246 0.010288805 0.145816265 1.78E-05 4.750795454 -0.081795588 ECS(ph)PTSSLER ddPTM_A459_MK2206_30min_R2 1 ECSPTSSLER 10 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 ECS(0.692)PT(0.156)S(0.022)S(0.129)LER 88.155 0.032646 13513000 56695 70011 49686 87711 67070 68418 73644 56574 69269 60898 TRUE FALSE 61035.61279 66534.35555 51342.50644 80544.73073 64436.4948 71021.69493 63974.45434 63968.41605 75293.89241 58910.90325 1.036066491 1.129406474 0.871528081 1.367229601 1.093795736 1.205578102 1.085952698 1.0858502 1.278097742 1 15.84624705 -5.746272075 24.99973411 1.159195424 1.024041075 0.251074614 0.115947608 357.4671097 589195.8573 0.02989516 0.051526678 1.79E-06 5.746272075 -0.135154349 ECS(ph)VEKGTGDSLR ddPTM_A459_MK2206_30min_R1 2 ECSVEKGTGDSLR 13 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 ECS(0.556)VEKGT(0.439)GDS(0.006)LR;ECS(1)VEKGTGDSLR 161.49 0.0017262 22663600 2687.2 2947.4 3108.3 2818.28 3001.1 2360.6 2376.05 3119.7 1775.61 1078.85 TRUE FALSE 2458.639529 2755.523724 2897.317256 3035.344414 2881.559832 2494.255132 2217.54804 3092.424792 1960.191014 1212.506083 2.027733769 2.272585485 2.389528017 2.503364277 2.376532269 2.057107314 1.828896425 2.550440641 1.616644272 1 10.24377627 -8.517477226 4.085848869 1.001917552 2.245430415 0.777079933 0.214586691 0.082326501 4.033871494 0.216116648 0.056602925 3.04E-09 8.517477226 1.243512863 ECSEAMEVETSVISIDS(ph)PQK ddPTM_A459_MK2206_30min_R1 1 ECSEAMEVETSVISIDSPQK 20 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 ECSEAMEVETSVIS(0.125)IDS(0.875)PQK 178.35 2.33E-13 4227200 2429.6 2276.8 2629.8 1702 1769.8 2053.7 2421.5 2155.6 2977.8 2902.3 TRUE FALSE 2222.949762 2128.579906 2451.296503 1833.088335 1699.305118 2169.978719 2259.966153 2136.753816 3287.352966 3261.858835 0.681497843 0.652566531 0.75150294 0.561976599 0.520962189 0.665258317 0.692846094 0.655072437 1.007815829 1 11.67147863 -8.257419972 7.277764731 1.005846238 0.645999092 0.843079818 0.061468849 0.046079686 19.68617507 0.052202622 0.016940831 5.53E-09 8.257419972 -0.359847146 ECSPT(ph)SSLER ddPTM_A459_MK2206_30min_R2 2 ECSPTSSLER 10 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 ECS(0.314)PT(0.409)S(0.257)S(0.02)LER;ECS(0.337)PT(0.464)S(0.06)S(0.139)LER 112.64 0.018972 176609000 139480 133635 138927 138217 153159 127500 143840 113402 112390 124492 TRUE FALSE 150158.696 126998.8802 143558.7568 126924.229 147145.2081 132352.1018 124953.6352 128224.0308 122165.479 120429.8362 1.246856267 1.054546649 1.192053077 1.053926775 1.221833498 1.098997607 1.037563773 1.064719797 1.014412067 1 16.87783334 -7.110262485 3.651261895 1.034633624 1.146050416 0.472184225 0.061440177 0.23047745 5.565499171 0.02296684 0.017590019 7.76E-08 7.110262485 0.111416792 ECTNILEGDESDSLTDY(ph)DIVGGK ddPTM_A459_MK2206_30min_R1 1 ECTNILEGDESDSLTDYDIVGGK 23 0 F8W9J4;Q03001;Q03001-9 F8W9J4 DST Dystonin 1 ECTNILEGDES(0.008)DS(0.008)LT(0.259)DY(0.725)DIVGGK 49.433 0.039654 10890000 133.44 201.35 138.46 126.65 168.11 187.16 146.11 0 143.21 186.81 TRUE FALSE 122.0902273 188.2420784 129.061721 136.4046049 161.4138227 197.7568375 136.3632685 0 158.097192 209.9534331 0.581510983 0.896589666 0.614715935 0.649689805 0.768807732 0.941908091 0.649492921 0 0.753010749 1 7.713925569 -7.53169039 24.98995266 0.490852585 0.745036327 0.035293695 0.261534155 358.8319792 1017637.148 0.115851807 0.067013444 2.94E-08 7.53169039 0.254183741 EDAEGVAAEEEQEGDS(ph)GEQETGATDARPR ddPTM_A459_MK2206_30min_R2 1 EDAEGVAAEEEQEGDSGEQETGATDARPR 29 1 Q96KC8 Q96KC8 DNAJC1 DnaJ homolog subfamily C member 1 1 EDAEGVAAEEEQEGDS(0.999)GEQET(0.001)GATDARPR 118.04 7.84E-14 4393900 13311 8043.4 10646 10858 10103 16118 15253 8432.2 13925 9008.5 TRUE FALSE 14330.10039 7643.976452 11000.93233 9970.866667 9706.305456 16731.38178 13250.26278 9534.317492 15136.17133 8714.553383 1.644387241 0.877150683 1.262363295 1.14416267 1.113804119 1.919935658 1.520475255 1.094068402 1.736884343 1 13.08921101 EDAEHHPDEDVDESES ddPTM_A459_MK2206_30min_R1 1 EDAEHHPDEDVDESES 16 0 Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 Q5JY65 CRNKL1 Crooked neck-like protein 1 0 119.25 0.0023856 3745600 2627.8 2527.7 2442.9 1974.4 1934.6 2311.3 2273.4 1892.5 2326.9 2672.1 FALSE TRUE 2404.291811 2363.146271 2277.082754 2126.46863 1857.540785 2442.163809 2121.745634 1875.954072 2568.789582 3003.139921 0.800592671 0.786891831 0.758233986 0.70808177 0.61853288 0.813203471 0.706509084 0.624664225 0.855367931 1 11.55225598 -8.531869766 6.102222401 0.999948867 0.728406917 0.648889967 0.063616773 0.080409792 18.70955818 0.063288096 0.01640008 2.94E-09 8.531869766 -0.271541951 EDAEHHPDEDVDESES ddPTM_A459_MK2206_30min_R2 1 EDAEHHPDEDVDESES 16 0 Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 Q5JY65 CRNKL1 Crooked neck-like protein 1 0 80.96 0.031369 4603000 22340 22606 22638 25995 19588 24389 25855 19041 19986 24029 FALSE TRUE 24050.36758 21483.41891 23392.73962 23871.12535 18818.8767 25317.14049 22460.20744 21529.72408 21724.34615 23244.9357 1.034649779 0.924219331 1.006358543 1.026938756 0.809590396 1.089146505 0.966240894 0.926211385 0.93458405 1 14.50462881 -4.737567786 24.18703312 0.964823632 1.034650231 0.080076865 0.07101437 3873.212308 3924085.7 0.017044301 0.96923181 1.83E-05 4.737567786 0.0698266 EDALDDSVSSSSVHASPLAS(ph)SPVR ddPTM_A459_MK2206_30min_R1 1 EDALDDSVSSSSVHASPLASSPVR 24 0 P49792;Q99666;O14715;J3KQ37 P49792;Q99666 RANBP2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 EDALDDSVSSSSVHAS(0.002)PLAS(0.499)S(0.499)PVR 173.93 1.36E-16 0 682.11 372.63 377.99 424 871.94 1223.5 972.71 669.86 417.06 350.14 TRUE FALSE 624.0929626 348.3717193 352.3330919 456.6565535 837.2087834 1292.773513 907.8222907 664.0034846 460.4148795 393.5179866 1.585932496 0.885275213 0.895341773 1.160446457 2.127498137 3.285170073 2.306939763 1.687352312 1.16999704 1 8.620285769 -6.244142001 7.994021235 2.050826448 1.095446141 0.267057567 0.627370423 0.25149513 93.47288488 0.199038562 0.249906396 5.70E-07 6.244142001 -0.955380306 EDALDDSVSSSSVHASPLAS(ph)SPVRK ddPTM_A459_MK2206_30min_R2 3 EDALDDSVSSSSVHASPLASSPVRK 25 1 P49792;Q99666;O14715;J3KQ37 P49792;Q99666 RANBP2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 EDALDDSVSSSSVHAS(0.002)PLAS(0.499)S(0.499)PVRK;EDALDDSVSSSSVHAS(0.002)PLAS(0.725)S(0.273)PVRK;EDALDDSVSSSSVHAS(0.001)PLAS(0.499)S(0.499)PVRK 98.804 3.43E-06 25929700 21452.1 51369.3 32324.1 104375 88903 156702 81557 48001.4 92737 31304.8 TRUE FALSE 23094.48927 48818.37526 33401.76936 95847.22862 85412.22152 162665.4044 70848.46793 54275.34779 100803.0966 30283.32694 0.762614006 1.612054559 1.102975556 3.165016473 2.820437189 5.371450922 2.339520624 1.792251819 3.328666524 1 14.88623609 -5.75915361 24.97877128 2.94898723 1.204498293 0.325371208 1.093407056 68.20849751 745358.0296 0.304736704 0.497033765 1.74E-06 5.75915361 -1.744488937 EDARPVPQGSCQSELHR ddPTM_A459_MK2206_30min_R1 1 EDARPVPQGSCQSELHR 17 1 P22692-2;P22692 P22692-2 IGFBP4 Insulin-like growth factor-binding protein 4 0 80.411 0.013231 3639500 2886.5 1875.5 2112.7 1681 3207.4 2807.9 2987.2 2672.4 2152.1 2123.9 FALSE TRUE 2640.988017 1753.404609 1969.29581 1810.470911 3079.642466 2966.880871 2787.929338 2649.035489 2375.818496 2387.024767 1.10639322 0.734556521 0.825000158 0.758463396 1.290159411 1.24292002 1.167951576 1.109764559 0.99530534 1 11.22099782 -6.254858892 24.99927013 1.146946945 0.845199748 0.528453178 0.12826853 400.4504063 1521309.888 0.038567684 0.048626796 5.56E-07 6.254858892 -0.301747197 EDAS(ph)PLPHVCCCK ddPTM_A459_MK2206_30min_R2 1 EDASPLPHVCCCK 13 0 C9J7Z4;Q8NCE0-5;Q8NCE0-3;Q8NCE0-2;Q8NCE0 C9J7Z4 TSEN2 tRNA-splicing endonuclease subunit Sen2 1 EDAS(1)PLPHVCCCK 126.1 0.0018368 0 28575 29319 22505 30332 23745 26591 30765 28759 21143 23537 TRUE FALSE 30762.72397 27863.06109 23255.30547 27853.77857 22812.65199 27602.93914 26725.51854 32517.90004 22981.97992 22768.98962 1.351079889 1.223728482 1.021358693 1.223320799 1.001917625 1.212304086 1.173768314 1.428166141 1.009354403 1 14.47478265 -8.471097415 24.99954706 0.999997142 1.193776633 0.297508552 0.121956612 376.31338 181680.8782 0.117682909 0.030385596 3.38E-09 8.471097415 0.193779491 EDAVLEYLK ddPTM_A459_MK2206_30min_R2 1 EDAVLEYLK 9 0 P26038 P26038 MSN Moesin 0 141.48 0.030512 705580 11390 10518 10032 12384 11592 7400.9 11599 11914 10851 12489 FALSE TRUE 12262.02716 9995.691415 10366.46187 11372.18759 11136.83983 7682.546436 10076.03737 13471.20071 11794.80037 12081.48495 1.01494371 0.827356195 0.858045341 0.941290547 0.921810512 0.635894219 0.834006532 1.115028555 0.976270749 1 13.56051017 -7.749685868 24.9830407 1.034237243 0.857093747 0.378487137 0.09879323 219.286056 466112.5899 0.048679824 0.027808429 1.78E-08 7.749685868 -0.177143496 EDDDVIVNKPHVS(ph)DEEEEEPPFYHHPFK ddPTM_A459_MK2206_30min_R2 2 EDDDVIVNKPHVSDEEEEEPPFYHHPFK 28 1 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;H7C1M2;H7C2G8;J3QSZ5 P18583-10 SON Protein SON 1 EDDDVIVNKPHVS(0.998)DEEEEEPPFY(0.002)HHPFK;EDDDVIVNKPHVS(0.997)DEEEEEPPFY(0.003)HHPFK 72.513 0.00011493 83080000 247197 203019 232693 216235 212761 147972 246200 194995 155000 247917 TRUE FALSE 266122.5924 192937.3717 240450.8685 198567.9088 204406.9341 153603.1781 213873.6443 220481.516 168481.6198 239827.4886 1.109641743 0.804483976 1.002599285 0.827961423 0.852308196 0.640473613 0.891781195 0.919333798 0.702511713 1 17.8716375 -2.273193935 1.28436983 0.838621448 199.9813042 0.307184348 0.11218756 1378.289721 4.036737089 0.032061601 806704.4231 0.005330968 2.273193935 199.1426827 EDEEES(ph)LNEVGYDDIGGCR ddPTM_A459_MK2206_30min_R2 2 EDEEESLNEVGYDDIGGCR 19 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 EDEEES(1)LNEVGYDDIGGCR;EDEEES(1)LNEVGYDDIGGCR 268.82 1.36E-58 12611700 44461 35307 39188 39799 33391 28080 41934 32630 25244.8 43217 TRUE FALSE 47864.96834 33553.70572 40494.50836 36547.29439 32079.90156 29148.60408 36428.01543 36894.85304 27440.54707 41806.83283 1.144907784 0.802589037 0.968609809 0.874194286 0.767336327 0.697221055 0.871341189 0.882507728 0.656365125 1 15.35145113 -2.21507676 1.21860031 0.822753432 199.9999998 0.415043494 0.1062056 975.0687296 2.989132466 0.031077388 541093.3768 0.006094292 2.21507676 199.1772464 EDEEES(ph)LNEVGYDDIGGCRK ddPTM_A459_MK2206_30min_R1 2 EDEEESLNEVGYDDIGGCRK 20 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 EDEEES(1)LNEVGYDDIGGCRK;EDEEES(1)LNEVGYDDIGGCRK 153.25 3.46E-06 11371300 2473.45 2680.9 2714.9 2386.9 1686.95 1914.51 2052.23 2596.3 2350.9 2389.9 TRUE FALSE 2263.070089 2506.372923 2530.620152 2570.739452 1619.755209 2022.907902 1915.329481 2573.600823 2595.284468 2685.978855 0.842549481 0.933132038 0.942159372 0.957095938 0.603040938 0.753136198 0.713084348 0.958161237 0.96623414 1 11.39123223 -10.35469926 7.293364538 1 0.848987975 0.121871505 0.118870807 9.04E-10 2.57E-10 0.125692363 0.030484876 4.42E-11 10.35469926 -0.151012026 EDEEES(ph)LNEVGYDDIGGCRK ddPTM_A459_MK2206_30min_R2 2 EDEEESLNEVGYDDIGGCRK 20 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 EDEEES(1)LNEVGYDDIGGCRK;EDEEES(1)LNEVGYDDIGGCRK 106.69 0.00023923 10732300 21241.3 25619 25199 18232.9 24827.3 16232.7 27032 20481 12859.8 24836 TRUE FALSE 22867.55026 24346.79771 26039.12208 16743.21375 23852.45545 16850.44677 23482.66593 23157.93702 13978.32216 24025.60335 0.951799209 1.013368836 1.083807208 0.696890459 0.992793192 0.70135374 0.977401715 0.963885763 0.581809412 1 14.55228504 -5.742070918 24.9682229 0.849076512 1.016029468 0.237100227 0.140791243 350.8999271 452347.5828 0.036300032 0.062752329 1.81E-06 5.742070918 0.166952956 EDEEESLNEVGYDDIGGCR ddPTM_A459_MK2206_30min_R2 2 EDEEESLNEVGYDDIGGCR 19 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 402.98 0 31772000 46670 36926 40822 41477 36502 34742 50867 36402 29932 42007 FALSE TRUE 50243.09108 35092.30854 42182.98511 38088.19642 35068.74807 36064.13115 44188.1018 41159.86639 32535.43126 40636.31503 1.236408642 0.863570147 1.038061278 0.937294545 0.862990358 0.887485273 1.087404253 1.01288383 0.800649154 1 15.31048196 -4.751166896 24.99859585 0.946785503 1.236409239 0.509790553 0.086147867 369.3395871 898745.9272 0.021506955 0.292597567 1.77E-05 4.751166896 0.289623736 EDEEESLNEVGYDDIGGCRK ddPTM_A459_MK2206_30min_R1 1 EDEEESLNEVGYDDIGGCRK 20 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 184.15 9.30E-14 6168500 1555.9 1703.9 1868.2 1539.1 980.35 1404.7 1557.3 1346.8 1555.5 1319.2 FALSE TRUE 1423.562535 1592.9758 1741.391789 1657.641749 941.3005836 1484.2329 1453.415358 1335.02507 1717.199791 1482.632455 0.960158756 1.074423937 1.174526959 1.118039567 0.634884647 1.001079461 0.980293769 0.900442362 1.158210037 1 10.53394528 EDEGPPGYPEPLAPGHGS(ph)PFPSLSK ddPTM_A459_MK2206_30min_R2 2 EDEGPPGYPEPLAPGHGSPFPSLSK 25 0 B1AKB5;B0QYS6;B0QYS7;P19484-2;P19484 B1AKB5 TFEB Transcription factor EB 1 EDEGPPGYPEPLAPGHGS(0.66)PFPS(0.321)LS(0.019)K;EDEGPPGYPEPLAPGHGS(0.461)PFPS(0.36)LS(0.179)K 124.82 5.06E-08 6680500 31773 31408 35424 36782 31477 28292 31853 26103 24915 43706 TRUE FALSE 34205.56531 29848.32439 36605.01848 33776.79294 30241.05482 29368.67189 27670.66284 29514.75173 27082.06166 42279.8768 0.809027081 0.705969995 0.86577874 0.798885794 0.715258821 0.694625295 0.654464131 0.698080363 0.640542587 1 15.36768355 -4.738609676 22.99937122 0.742122208 0.809027807 0.016838171 0.10451824 2815.475034 2835991.04 0.025364292 1.143074053 1.83E-05 4.738609676 0.066905599 EDEIS(ph)PPPPNPVVK ddPTM_A459_MK2206_30min_R1 3 EDEISPPPPNPVVK 14 0 K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644-2;P10644;K7EMU2;K7EMZ6 K7EIE5 PRKAR1A "cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed" 1 EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK 174.24 8.95E-05 118502000 18616.2 19710.8 18599.6 14730 15024.1 14391.8 19742.5 15027.1 21912.5 28035.5 TRUE FALSE 17032.79443 18427.62334 17337.11097 15864.50715 14425.65828 15206.65128 18425.51385 14895.71965 24190.38279 31508.7494 0.540573484 0.584841471 0.550231644 0.503495298 0.45783024 0.482616783 0.584774521 0.472748679 0.767735415 1 14.94346487 -8.507517795 3.038860954 0.998816563 0.523398407 0.925211917 0.043567274 0.058288514 1.296649236 0.044604884 0.011899604 3.11E-09 8.507517795 -0.475418156 EDEIS(ph)PPPPNPVVK ddPTM_A459_MK2206_30min_R2 4 EDEISPPPPNPVVK 14 0 K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644-2;P10644;K7EMU2;K7EMZ6 K7EIE5 PRKAR1A "cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed" 1 EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK 160.8 0.00028794 201855000 236750 194117 201106 201259 182565 146059.1 227864 184382 149530.1 216378 TRUE FALSE 254875.762 184477.4321 207810.7737 184815.4959 175396.5808 151617.4814 197945.1831 208481.3605 162535.9578 209317.6036 1.21765087 0.881327843 0.992801227 0.882942919 0.83794472 0.72434176 0.945669068 0.996004908 0.776504006 1 17.67533412 -2.572756352 1.424425423 0.883802669 199.9461342 0.522407673 0.09139582 701.5085023 3.099205578 0.025918332 454599.1736 0.002674506 2.572756352 199.0623315 EDET(ph)S(ph)PKK ddPTM_A459_MK2206_30min_R1 1 EDETSPKK 8 1 Q6ZMV5-2;Q6ZMV5 Q6ZMV5-2 SMEK3P Putative SMEK homolog 3 2 EDET(1)S(1)PKK 87.754 0.0411 0 1621.3 1340.1 1456.7 1502.1 1377.3 1547.4 1685 1877.6 1585.8 1367.3 TRUE FALSE 1483.399921 1252.859246 1357.823263 1617.792002 1322.439225 1635.012451 1572.596724 1861.184341 1750.649585 1536.691447 0.965320608 0.815296558 0.883601757 1.052776083 0.86057564 1.063982268 1.023365314 1.211163337 1.139232986 1 10.5856118 -7.032351156 1.443965118 1.123965034 0.911005614 0.498834469 0.083668586 0.317716008 1.338298045 0.04326598 0.031046699 9.28E-08 7.032351156 -0.212959419 EDEVEEWQHR ddPTM_A459_MK2206_30min_R1 2 EDEVEEWQHR 10 0 P15311;E7EQR4 P15311 EZR Ezrin 0 ; 102.53 0.021342 14801100 9876.1 11211.8 10682.8 9345.1 9675.7 8319.6 9823.9 8412.3 8890.3 10466.2 FALSE TRUE 9036.085834 10481.90978 9957.6813 10064.86122 9290.29638 8790.648562 9168.565556 8338.752148 9814.478499 11762.83187 0.768189661 0.891104276 0.846537756 0.855649501 0.789801 0.74732417 0.779452232 0.708906855 0.834363579 1 13.52194781 -6.268735632 23.01387223 0.790761331 0.844434687 0 0.079069139 459.629561 1449763.326 0.022892388 0.026539628 5.39E-07 6.268735632 0.053673356 EDEVEEWQHR ddPTM_A459_MK2206_30min_R2 4 EDEVEEWQHR 10 0 P15311;E7EQR4 P15311 EZR Ezrin 0 ;;; 164.33 0.00052993 40838600 326267 396960 349065 417935 376429 387711 417430 312875 378283 356564 FALSE TRUE 351246.2524 377247.5436 360702.6529 383788.3736 361648.5061 402465.6138 362620.9396 353768.8368 411185.3716 344929.3459 1.018313624 1.093695124 1.045729096 1.112657935 1.04847126 1.166805952 1.051290486 1.025626961 1.192085789 1 18.39594135 -3.905176382 1.93101281 1.08361833 2.90E-09 0.091717208 0.058206873 59.30674246 15.45451336 0.014556922 246.8832224 0.000124401 3.905176382 -1.083618328 EDFDSTSSSSST(ph)PPLQPR ddPTM_A459_MK2206_30min_R1 2 EDFDSTSSSSSTPPLQPR 18 0 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 EDFDSTS(0.001)S(0.001)S(0.002)S(0.025)S(0.025)T(0.945)PPLQPR;EDFDSTSSSSS(0.205)T(0.794)PPLQPR 292.45 1.49E-80 27787000 6044.2 5914.1 5188.93 4035.78 4453.74 5029.8 6161.4 4763.24 6728.6 8132.1 TRUE FALSE 5530.109051 5529.091015 4836.719889 4346.616475 4276.338105 5314.582929 5750.384248 4721.595495 7428.062049 9139.565942 0.605073489 0.604962101 0.529206739 0.475582375 0.46789291 0.58149183 0.629174764 0.516610474 0.812736852 1 13.15790993 -8.462060403 2.867416522 0.998640582 0.549949507 0.883141701 0.053664032 0.079875088 1.40540892 0.056620297 0.015226109 3.45E-09 8.462060403 -0.448691075 EDFDSTSSSSST(ph)PPLQPR ddPTM_A459_MK2206_30min_R2 2 EDFDSTSSSSSTPPLQPR 18 0 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 EDFDSTSSS(0.001)S(0.017)S(0.038)T(0.944)PPLQPR;EDFDSTSSSS(0.003)S(0.144)T(0.853)PPLQPR 149.6 0.00038679 43924000 79011 62736 57873 74291 58880 63453 75479 53481 42845 81607 TRUE FALSE 85060.14291 59620.62147 59802.45694 68221.18765 56568.07535 65867.74838 65568.51663 60471.15033 46571.58065 78944.17027 1.077472125 0.755225133 0.757528475 0.864170051 0.716557982 0.834358613 0.83056819 0.765998935 0.589930586 1 16.26854511 -4.757921777 24.9970313 0.784756118 1.077472537 0.420453144 0.100880573 92.98796797 660696.1616 0.023627708 0.168521557 1.75E-05 4.757921777 0.292716418 EDGGT(ph)VGVFSPK ddPTM_A459_MK2206_30min_R2 1 EDGGTVGVFSPK 12 0 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 EDGGT(0.742)VGVFS(0.258)PK 130.15 0.0051627 6996300 59922 50877 53824 50309 47525 35610 58396 40719 36368 51433 TRUE FALSE 64509.67439 48350.52216 55618.4653 46198.59377 45658.92971 36965.1635 50728.53505 46041.11311 39531.2229 49754.74542 1.2965532 0.971777099 1.117852475 0.928526382 0.917679898 0.742947496 1.019571794 0.925361244 0.79452166 1 15.60254651 -1.522878745 0.612637086 0.896277284 26.44467727 0.572411655 0.097128512 131.8556787 0.976929301 0.042396261 4525.858892 0.03 1.522878745 25.54839998 EDGGTVGVFS(ph)PK ddPTM_A459_MK2206_30min_R2 1 EDGGTVGVFSPK 12 0 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 EDGGT(0.19)VGVFS(0.81)PK 90.476 0.024356 7749900 42343 41356 38360 30789 42923 26247 44458 35304 27260 47505 TRUE FALSE 45584.81264 39302.32118 39638.90325 28273.44021 41237.62735 27245.84798 38620.6112 39918.35402 29631.02553 45954.91574 0.991946387 0.855236497 0.862560677 0.615243 0.897349646 0.592882122 0.840402176 0.868641654 0.644784677 1 15.48793157 -4.843518394 1.56034398 0.775866246 1.050229186 0.190750909 0.12654938 1.431130909 3.659334912 0.033672215 0.585991503 1.43E-05 4.843518394 0.27436294 EDGKEDISDPMDPNPCSATY(ph)SNLGQSR ddPTM_A459_MK2206_30min_R1 1 EDGKEDISDPMDPNPCSATYSNLGQSR 27 1 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 EDGKEDISDPMDPNPCS(0.241)AT(0.131)Y(0.589)S(0.038)NLGQS(0.001)R 87.196 0.00045684 5244800 1282.9 1090.2 1216.6 879.47 1033 1252.5 1308.1 1136.2 1406.2 1448 TRUE FALSE 1173.782618 1019.227782 1134.020582 947.2069318 991.8534226 1323.415468 1220.839036 1126.266323 1552.379522 1627.389172 0.721267315 0.626296278 0.696834292 0.582040822 0.60947525 0.813213883 0.750182597 0.692069446 0.953907983 1 10.66834358 -8.247208205 0.751252519 1.011457773 0.656019997 0.724445467 0.070043312 0.339638292 0.421633457 0.068367454 0.027584304 5.66E-09 8.247208205 -0.355437777 EDGKEDISDPMDPNPCSATY(ph)SNLGQSR ddPTM_A459_MK2206_30min_R2 2 EDGKEDISDPMDPNPCSATYSNLGQSR 27 1 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 EDGKEDISDPMDPNPCS(0.09)AT(0.252)Y(0.584)S(0.062)NLGQS(0.012)R;EDGKEDISDPMDPNPCS(0.132)AT(0.252)Y(0.592)S(0.024)NLGQSR 98.924 1.47E-05 8327800 62300 43486 46346 45135 48451 33251.1 64765 38943 35778 50518 TRUE FALSE 67069.7359 41326.54847 47891.15251 41447.32612 46548.57029 34516.49391 56261.2777 44032.98381 38889.90577 48869.6018 1.372422394 0.84564938 0.979978366 0.848120807 0.952505619 0.706297834 1.151253041 0.901030133 0.795789291 1 15.57664973 -4.756676875 24.99036666 0.908783088 1.3724231 0.587764383 0.116441591 99.38109746 521422.2735 0.027587197 0.218562829 1.75E-05 4.756676875 0.463640013 EDGNEEDKENQGDETQGQQPPQR ddPTM_A459_MK2206_30min_R2 1 EDGNEEDKENQGDETQGQQPPQR 23 1 H0Y449;P67809 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 0 77.469 0.0021731 16065000 9402.3 11269 10455 11821 10908 7401.4 10512 9871 7413.9 12148 FALSE TRUE 10122.14732 10709.39785 10803.56448 10855.18649 10479.69711 7683.065463 9131.761773 11161.17359 8058.747621 11751.61175 0.861341195 0.911313109 0.919326192 0.923718951 0.891766792 0.653788231 0.777064624 0.949756835 0.685756796 1 13.52057102 -6.55469645 24.99958936 0.80397086 0.905826629 0.161317418 0.099722483 319.0228311 250658.4216 0.031721686 0.031721925 2.79E-07 6.55469645 0.101855769 EDGNEEDKENQGDETQGQQPPQRR ddPTM_A459_MK2206_30min_R1 1 EDGNEEDKENQGDETQGQQPPQRR 24 2 H0Y449;P67809 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 0 105.52 3.95E-07 15546000 2084.4 2322 2552.7 2715.2 1973.2 1444.4 1639.4 2423.8 1511.1 982.96 FALSE TRUE 1907.110834 2170.837378 2379.429836 2924.325174 1894.603266 1526.18068 1530.038617 2402.608972 1668.184253 1104.736506 1.726303806 1.965027286 2.153843766 2.647079334 1.714982039 1.381488411 1.38498059 2.174825363 1.510029083 1 10.10948659 -6.505985541 24.20925734 1.556124759 2.122356 0.418175416 0.348125538 539.5759213 773254.9537 0.111758244 0.123581896 3.12E-07 6.505985541 0.566231241 EDGNEEDKENQGDETQGQQPPQRR ddPTM_A459_MK2206_30min_R2 2 EDGNEEDKENQGDETQGQQPPQRR 24 2 H0Y449;P67809 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 0 ; 63.392 0.002581 13405800 19929.7 40558 31250.7 34477 46592 30916.6 45750 25678.6 35173 33564 FALSE TRUE 21455.53316 38543.9487 32292.58274 31660.11881 44762.56397 32093.15288 39742.97004 29034.88119 38232.28396 32468.80943 0.660804431 1.18710693 0.994572431 0.975093309 1.378632748 0.988430233 1.224035336 0.89423917 1.177508034 1 14.98676686 -4.753549991 24.99882162 1.09105806 0.660803653 0.457713699 0.140499187 255.2443582 808718.9004 0.033014601 0.351383413 1.76E-05 4.753549991 -0.430254407 EDGRS(ph)SSGPPHETAAPK ddPTM_A459_MK2206_30min_R1 1 EDGRSSSGPPHETAAPK 17 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 EDGRS(0.332)S(0.332)S(0.332)GPPHET(0.005)AAPK 62.362 0.02904 5802700 855.55 607.78 788.9 438.62 1057.9 841.57 1092.2 778.05 651.83 501.22 TRUE FALSE 782.7809798 568.2134115 735.351666 472.4025884 1015.761603 889.2189661 1019.341331 771.2475909 719.5900611 563.3149176 1.389597462 1.008695836 1.305400661 0.838611891 1.803186053 1.57854681 1.809540807 1.369123321 1.277420566 1 9.137797867 -6.262401535 24.99946908 1.513533173 1.138643869 0.269476513 0.267162331 107.346476 2789159.046 0.079310715 0.095164827 5.47E-07 6.262401535 -0.374889304 EDGRSSS(ph)GPPHETAAPK ddPTM_A459_MK2206_30min_R2 2 EDGRSSSGPPHETAAPK 17 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 EDGRS(0.093)S(0.327)S(0.58)GPPHET(0.001)AAPK;EDGRS(0.126)S(0.126)S(0.748)GPPHETAAPK 73.405 0.013854 7457600 39384 56644 43531.3 64837 64143 64474 64433 50546 60892 53303 TRUE FALSE 42399.26932 53831.14133 44982.61182 59539.6097 61624.42353 66927.60325 55972.8697 57152.53575 66188.27609 51563.72748 0.822269285 1.04397304 0.87236928 1.154680094 1.195111885 1.297958983 1.085508602 1.108386429 1.283620858 1 15.65406894 -5.772277698 23.08559873 1.169282071 0.925980813 0.567781878 0.098715067 56.6580705 120682.0622 0.026755692 0.040214659 1.69E-06 5.772277698 -0.243301258 EDGVLGSRS(ph)PR ddPTM_A459_MK2206_30min_R1 2 EDGVLGSRSPR 11 1 A0A1B0GVL4;P78312-6;P78312-2;P78312-5;P78312;D6RFZ4;P78312-3;E7EUR8;P78312-4 A0A1B0GVL4;E7EUR8 FAM193A Protein FAM193A 1 EDGVLGS(0.097)RS(0.903)PR;EDGVLGS(0.08)RS(0.92)PR 82.494 0.021932 7446200 7063.5 6295.7 6899.7 7390.1 9973.3 7347 6740.4 7618.8 4482.8 2359.1 TRUE FALSE 6462.712233 5885.848786 6431.367588 7959.286782 9576.042342 7762.980791 6290.760215 7552.189635 4948.803102 2651.363118 2.437505519 2.219933115 2.425683432 3.001960285 3.61174306 2.927920637 2.372651325 2.8484177 1.866512764 1 11.37251855 -8.516348031 2.52108602 1.001428989 2.740646613 0.671243991 0.386317002 0.181351407 2.714874413 0.419161484 0.113825383 3.05E-09 8.516348031 1.739217624 EDGVLGSRS(ph)PR ddPTM_A459_MK2206_30min_R2 2 EDGVLGSRSPR 11 1 A0A1B0GVL4;P78312-6;P78312-2;P78312-5;P78312;D6RFZ4;P78312-3;E7EUR8;P78312-4 A0A1B0GVL4;E7EUR8 FAM193A Protein FAM193A 1 EDGVLGS(0.031)RS(0.969)PR;EDGVLGS(0.074)RS(0.926)PR 87.831 0.017324 9117500 21725.2 66431 45493 67961 80840 68658 56785 41633 66462 42150 TRUE FALSE 23388.49802 63132.13314 47009.71391 62408.3689 77665.81541 71270.8283 49329.06129 47074.57605 72242.74462 40774.64895 0.573603909 1.548318251 1.152915233 1.530567902 1.904757427 1.747920096 1.209797326 1.15450598 1.771756385 1 15.31538484 -4.758023077 24.99929288 1.461315026 0.57360267 0.445139423 0.292033912 93.17518391 681716.0717 0.074213004 0.525282612 1.75E-05 4.758023077 -0.887712357 EDHLVYADEESSNITDGRIT(ph)PEPAVSNTEEPSTTSTASNYPDVLTRPSLHR ddPTM_A459_MK2206_30min_R2 1 EDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTASNYPDVLTRPSLHR 51 2 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 EDHLVY(0.002)ADEES(0.059)S(0.059)NIT(0.177)DGRIT(0.557)PEPAVS(0.059)NT(0.059)EEPS(0.008)T(0.008)T(0.008)S(0.003)T(0.001)AS(0.001)NY(0.001)PDVLTRPSLHR 51.587 0.0001149 5183500 4216.2 7699.5 3866.9 12254 12702 12753 10902 6594.3 10518 5489.2 TRUE FALSE 4538.995514 7317.154026 3995.820516 11252.809 12203.25566 13238.32435 9470.554304 7456.197652 11432.83663 5310.087854 0.854787273 1.37797231 0.752496122 2.119138009 2.298126885 2.493051851 1.783502376 1.404157117 2.153040956 1 12.37452001 -5.765599756 24.99998551 1.947162141 1.033373883 0.462154159 0.440615836 90.08829592 541351.2979 0.123747407 0.19121642 1.72E-06 5.765599756 -0.913788258 EDHLVYADEESSNITDGRITPEPAVS(ph)NTEEPSTTSTASNYPDVLTRPSLHR ddPTM_A459_MK2206_30min_R2 2 EDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTASNYPDVLTRPSLHR 51 2 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 EDHLVYADEES(0.016)S(0.044)NIT(0.051)DGRIT(0.051)PEPAVS(0.509)NT(0.157)EEPS(0.108)T(0.038)T(0.017)S(0.006)T(0.002)ASNYPDVLTRPSLHR;EDHLVYADEES(0.008)S(0.017)NIT(0.118)DGRIT(0.118)PEPAVS(0.365)NT(0.365)EEPS(0.006)T(0.002)T(0.001)STASNYPDVLTRPSLHR 67.632 4.48E-11 14178400 5963.1 15165.1 9928.6 18061.2 16930.8 22774.8 19945.2 10027.9 16652.6 13509.7 TRUE FALSE 6419.639521 14412.02319 10259.61457 16585.54219 16266.01172 23641.51097 17326.37128 11338.58096 18101.01305 13068.8796 0.491215752 1.102774196 0.785041632 1.269086769 1.244637048 1.808992944 1.325773273 0.867601609 1.385047044 1 13.67384784 -4.616887621 0.833097378 1.28483137 4.82E-11 0.407085733 0.267891391 3.277902361 1.459948866 0.102530391 4.141018113 2.42E-05 4.616887621 -1.28483137 EDHS(ph)LEHR ddPTM_A459_MK2206_30min_R2 1 EDHSLEHR 8 0 H3BU36;H3BSM5;P60520 H3BU36 GABARAPL2 Gamma-aminobutyric acid receptor-associated protein-like 2 1 EDHS(1)LEHR 83.862 0.025055 3151700 16160 7363.2 9408.1 7562.9 9089.4 7875.3 11127 13943 11109 14243 TRUE FALSE 17397.22202 6997.554195 9721.761358 6944.986877 8732.504485 8175.00006 9666.011534 15765.39797 12075.24074 13778.25208 1.262658132 0.507869515 0.705587422 0.504054276 0.633788991 0.593326353 0.701541203 1.144223366 0.876398593 1 13.75010526 -7.707817511 9.036547422 1.007284215 0.679063317 0.301279093 0.211425877 0.344667138 54.29799787 0.096760543 0.055536198 1.96E-08 7.707817511 -0.328220898 EDIFYTS(ph)K ddPTM_A459_MK2206_30min_R1 4 EDIFYTSK 8 0 P52895;B4DK69;H0Y804;S4R3P0;P52895-2;P17516;Q04828;A6NHU4;A0A0A0MSS8;P42330;S4R3Z2;S4R3D5 P52895;Q04828;A0A0A0MSS8 AKR1C2;AKR1C1;AKR1C4;AKR1C3 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C3 1 EDIFYT(0.074)S(0.926)K;EDIFYT(0.21)S(0.79)K;EDIFYT(0.16)S(0.84)K;EDIFYT(0.018)S(0.982)K 123.75 0.0057592 22694400 21336.8 25169.2 23711.4 16429.7 16483.4 16029.4 21856.6 16760.2 23216.7 24798.8 TRUE FALSE 19521.99312 23530.68051 22101.93623 17695.11834 15826.83127 16936.97078 20398.58609 16613.66734 25630.15905 27871.06257 0.7004395 0.844269229 0.793006588 0.634892132 0.567858912 0.607690171 0.731891224 0.596090203 0.919597485 1 14.76648038 -8.407806828 4.64906589 0.996310158 0.687565697 0.637021387 0.083928782 0.148540798 4.650831985 0.090205898 0.023565788 3.91E-09 8.407806828 -0.308744461 EDIFYTS(ph)K ddPTM_A459_MK2206_30min_R2 2 EDIFYTSK 8 0 P52895;B4DK69;H0Y804;S4R3P0;P52895-2;P17516;Q04828;A6NHU4;A0A0A0MSS8;P42330;S4R3Z2;S4R3D5 P52895;Q04828;A0A0A0MSS8 AKR1C2;AKR1C1;AKR1C4;AKR1C3 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C3 1 EDIFYT(0.128)S(0.872)K;EDIFYT(0.018)S(0.982)K 121.5 0.0068629 21805100 399320 283582 297160 307150 230196 180634 405480 309260 180657 337410 TRUE FALSE 429892.2462 269499.7302 307067.1661 282054.8625 221157.3484 187508.1534 352239.9889 349681.3438 196370.2193 326400.3393 1.317070464 0.825672335 0.940768526 0.864137773 0.677564701 0.574472912 1.079165511 1.071326533 0.601623821 1 18.31628303 -4.759841136 24.96383379 0.847238484 1.317071054 0.397012603 0.173308126 43.4917444 679101.3153 0.044293062 0.273511639 1.74E-05 4.759841136 0.46983257 EDIFYTSK ddPTM_A459_MK2206_30min_R2 2 EDIFYTSK 8 0 P52895;B4DK69;H0Y804;S4R3P0;P52895-2;P17516;Q04828;A6NHU4;A0A0A0MSS8;P42330;S4R3Z2;S4R3D5 P52895;Q04828;A0A0A0MSS8 AKR1C2;AKR1C1;AKR1C4;AKR1C3 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C3 0 ; 135.83 0.036469 28580000 166611 181657 193641 206673 172905 178440 183676 144560 159600 155253 FALSE TRUE 179366.8663 172636.1775 200096.8943 189787.1548 166115.8809 185230.6592 159559.1206 163454.4883 173481.7195 150187.1073 1.194289373 1.149474017 1.332317386 1.263671417 1.106059527 1.233332624 1.062402249 1.088339014 1.155103941 1 17.19640145 -7.084338274 1.066559994 1.07488131 1.228006153 0.461871504 0.069699768 0.507213424 1.167177377 0.046046369 0.030554727 8.23E-08 7.084338274 0.153124843 EDILENEDEQNS(ph)PPK ddPTM_A459_MK2206_30min_R1 1 EDILENEDEQNSPPK 15 0 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 EDILENEDEQNS(1)PPK 270.51 6.08E-45 4085800 1826.8 2134.7 2126.8 1761.6 1145.4 1431.4 1407.3 1503.7 2185.9 2215.9 TRUE FALSE 1671.421067 1995.730642 1982.438742 1897.278737 1099.776293 1512.444631 1313.421585 1490.553309 2413.132127 2490.422421 0.671139584 0.801362301 0.796025094 0.76183009 0.441602309 0.607304455 0.527389078 0.598514251 0.968964986 1 11.28217476 -8.26938761 22.88737985 0.984482804 0.651700492 0.596507633 0.10982286 159.4893013 459239.7505 0.111307483 0.031085048 5.38E-09 8.26938761 -0.332782313 EDILENEDEQNS(ph)PPK ddPTM_A459_MK2206_30min_R2 2 EDILENEDEQNSPPK 15 0 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 EDILENEDEQNS(1)PPK;EDILENEDEQNS(1)PPK 186.75 2.29E-05 6748200 64665 50257 54016 43863 43240 32369 61661 44367 33511 60037 TRUE FALSE 69615.80212 47761.31046 55816.86648 40279.25259 41542.18034 33600.82498 53564.83663 50165.91923 36425.72621 58077.99761 1.198660508 0.822364965 0.961067337 0.693537213 0.715282586 0.578546547 0.922291381 0.863768059 0.627186331 1 15.82570409 -1.94140257 1.037015539 0.772470012 199.998415 0.439760011 0.135385158 709.0925505 2.170735522 0.041633362 334190.9271 0.011444516 1.94140257 199.225945 EDILENEDEQNS(ph)PPKK ddPTM_A459_MK2206_30min_R1 1 EDILENEDEQNSPPKK 16 1 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 EDILENEDEQNS(1)PPKK 103.99 0.0056683 0 2085.1 2638.6 2757.7 2220.5 1456.7 1668.4 2125.7 1575.6 2262.9 2640 TRUE FALSE 1907.751296 2466.82666 2570.515007 2391.523295 1398.676554 1762.863366 1983.898432 1561.824695 2498.136553 2967.063131 0.642976307 0.831403496 0.866349954 0.806023731 0.471401009 0.594144205 0.668640452 0.526387416 0.841955982 1 11.53481991 -8.52234221 9.475215811 0.999998276 0.682066613 0.419736461 0.122345007 0.0857616 210.1241454 0.130435164 0.033693337 3.00E-09 8.52234221 -0.317931664 EDILENEDEQNS(ph)PPKK ddPTM_A459_MK2206_30min_R2 1 EDILENEDEQNSPPKK 16 1 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 EDILENEDEQNS(1)PPKK 95.5 0.004447 5607500 33911 23419 30391 25596 24486 16205 39185 28366 16205 31991 TRUE FALSE 36507.25223 22256.04651 31404.22077 23504.72492 23524.55661 16821.69263 34039.96243 32073.5336 17614.48161 30947.13629 1.179664958 0.71916336 1.014769847 0.759512115 0.760152939 0.543562172 1.099939009 1.036397465 0.569179695 1 14.91751829 -4.749104773 24.64626139 0.835073861 1.179665912 0.235070651 0.187246578 745.5552793 1489613.984 0.046245888 0.770438822 1.78E-05 4.749104773 0.344592051 EDITHTYK ddPTM_A459_MK2206_30min_R2 1 EDITHTYK 8 0 P21980-2;P21980 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 0 99.442 0.026201 6983300 82661 79566 76591 90032 64531 64559 90772 71631 51076 75892 FALSE TRUE 88989.58972 75614.86814 79144.50571 82676.0976 61997.1887 67015.83798 78853.52736 80993.41765 55518.49816 73415.65026 1.212133781 1.029955709 1.078033164 1.126137238 0.844468291 0.912827684 1.074069726 1.10321733 0.756221568 1 16.16380002 -1.522878746 0.451946246 0.961075561 6.248496624 0.309625878 0.109405014 121.5590742 1.457889405 0.069531353 593.8463562 0.03 1.522878746 5.287421063 EDITQSAQHALR ddPTM_A459_MK2206_30min_R1 2 EDITQSAQHALR 12 0 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 0 ; 205.8 1.55E-05 12988800 10307 6980.8 8355 6227.8 11296.6 10509.7 10906.3 9055.9 7408.5 5754.2 FALSE TRUE 9430.335526 6526.348651 7787.885878 6707.466235 10846.6325 11104.75013 10178.76063 8976.725221 8178.640087 6467.073738 1.458207515 1.009165647 1.204236444 1.037171758 1.677208725 1.71712131 1.57393607 1.388066007 1.264658549 1 12.65889734 -6.253401489 24.8854979 1.477104771 1.167124728 0.22725447 0.227081807 737.7178031 2283990.386 0.067358839 0.085415989 5.58E-07 6.253401489 -0.309980043 EDITQSAQHALR ddPTM_A459_MK2206_30min_R2 2 EDITQSAQHALR 12 0 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 0 ; 174.05 0.00022311 13698500 54724 91559 64586 99807 96886 112173 110287 76304 77270 78135 FALSE TRUE 58913.71152 87012.3132 66739.265 91652.44883 93081.76883 116441.8221 95806.18442 86277.19479 83990.80493 75585.46135 0.779431791 1.151177907 0.882964314 1.212567168 1.231477154 1.540532002 1.267521329 1.141452248 1.111203179 1 16.20582114 -5.813149255 7.26786322 1.238429739 0.959543708 0.384272136 0.158165308 0.221074111 25.44473777 0.045416121 0.068242365 1.54E-06 5.813149255 -0.278886031 EDKDS(ph)LT(ph)NKGHK ddPTM_A459_MK2206_30min_R2 1 EDKDSLTNKGHK 12 2 C9JGT5;C9JFR2;J3QLN9;F8VXY9;E7EPA0;Q9Y222-4;Q9Y222-2;Q9Y222-3;Q9Y222-5;Q9Y222 C9JGT5 DMTF1 Cyclin-D-binding Myb-like transcription factor 1 2 EDKDS(1)LT(1)NKGHK 85.973 0.047929 0 882.36 0 569.7 0 0 559.77 616.68 0 0 594.56 TRUE FALSE 949.91416 0 588.6935137 0 0 581.0724396 535.7091752 0 0 575.1595559 1.651566335 0 1.023530788 0 0 1.010280423 0.931409675 0 0 1 9.167818422 -10.62357906 6.271765909 1.000001157 0.494575957 0.059973441 0.574301457 9.07E-06 1.30E-06 0.542844221 0.13165876 2.38E-11 10.62357906 -0.5054252 EDKS(ph)PETGTAGGSSTASYSAGR ddPTM_A459_MK2206_30min_R1 2 EDKSPETGTAGGSSTASYSAGR 22 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 EDKS(0.987)PET(0.012)GT(0.001)AGGSSTASYSAGR;EDKS(0.985)PET(0.012)GT(0.003)AGGSSTASYSAGR 115.92 1.84E-05 19079900 6960.8 7568.4 7573.6 5799.7 5657.1 5182.7 5911.3 5996.9 6983.2 6820.9 TRUE FALSE 6368.747407 7075.695784 7059.525133 6246.393899 5431.765728 5476.139995 5516.967963 5944.469736 7709.12863 7665.924587 0.830786598 0.923006182 0.920896762 0.8148259 0.708559766 0.714348274 0.719674176 0.775440675 1.005635855 1 12.90424409 -8.265424563 24.41763861 1.002817981 0.800797533 0.548492705 0.073263943 231.7244708 1419758.775 0.073991857 0.021937219 5.43E-09 8.265424563 -0.202020448 EDKS(ph)PETGTAGGSSTASYSAGR ddPTM_A459_MK2206_30min_R2 2 EDKSPETGTAGGSSTASYSAGR 22 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 EDKS(0.972)PET(0.025)GT(0.003)AGGSSTASYSAGR;EDKS(0.983)PET(0.011)GT(0.005)AGGSSTASYSAGR 64.761 0.0040198 25102000 67404 66274 61424 53227 50831 41040 66099 57161 37029 62817 TRUE FALSE 72564.50206 62982.92953 63471.8455 48878.18384 48835.11953 42601.80596 57420.1219 64632.13896 40249.71549 60767.28643 1.194137608 1.036461116 1.044506826 0.80435028 0.803641604 0.701064807 0.944918315 1.063600874 0.662358283 1 15.89100725 -5.636656165 3.989095052 0.852396008 1.100894411 0.441387688 0.123441993 0.212795602 6.195700238 0.034739825 0.063126506 2.31E-06 5.636656165 0.248498402 EDKS(ph)PSEESAPTTSPESVSGSVPSSGSSGR ddPTM_A459_MK2206_30min_R2 2 EDKSPSEESAPTTSPESVSGSVPSSGSSGR 30 1 A0A494C0B4;P54725-2;P54725-3;P54725 A0A494C0B4 RAD23A UV excision repair protein RAD23 homolog A 1 EDKS(0.553)PS(0.356)EES(0.091)APTTSPESVSGSVPSSGSSGR;EDKS(0.445)PS(0.188)EES(0.367)APTTSPESVSGSVPSSGSSGR 88.468 8.90E-07 102467400 76742 62751 68882 63916 58842 42067 72325 61460 46954 74364 TRUE FALSE 82617.42652 59634.87659 71178.4915 58693.85834 56531.56742 43667.88916 62828.64062 69493.03302 51037.97405 71937.50877 1.148461045 0.828981676 0.989448936 0.815900625 0.785842718 0.607025318 0.873378043 0.966019455 0.709476529 1 16.13445658 -1.767151527 1.019606563 0.822945766 199.9999997 0.358100092 0.120042967 1184.192713 2.60308737 0.037667652 549777.4386 0.017094188 1.767151527 199.1770539 EDKSPSEESAPTT(ph)SPESVSGSVPSSGSSGR ddPTM_A459_MK2206_30min_R2 1 EDKSPSEESAPTTSPESVSGSVPSSGSSGR 30 1 A0A494C0B4;P54725-2;P54725-3;P54725 A0A494C0B4 RAD23A UV excision repair protein RAD23 homolog A 1 EDKSPSEESAPT(0.009)T(0.696)S(0.295)PESVSGSVPSSGSSGR 144.44 7.78E-19 25206000 16874 18704 17891 21509 18580 20411 22653 15282 15061 21145 TRUE FALSE 18165.88641 17775.18656 18487.47701 19751.6459 17850.45584 21187.75491 19678.63389 17279.40987 16370.97856 20455.04038 0.888088514 0.868988094 0.90381034 0.965612657 0.872667837 1.035820732 0.962043268 0.844750709 0.800339586 1 14.32016876 -1.562456214 19.32987448 0.913334968 0.004577615 0 0.070313132 0 0 0.016572154 0 0.027386957 1.562456214 -0.908757353 EDKSPSEESAPTTS(ph)PESVSGSVPSSGSSGR ddPTM_A459_MK2206_30min_R1 2 EDKSPSEESAPTTSPESVSGSVPSSGSSGR 30 1 A0A494C0B4;P54725-2;P54725-3;P54725 A0A494C0B4 RAD23A UV excision repair protein RAD23 homolog A 1 EDKSPSEESAPTT(0.023)S(0.957)PES(0.015)VS(0.005)GS(0.001)VPSSGSSGR;EDKSPSEESAPTT(0.246)S(0.752)PES(0.001)VSGSVPSSGSSGR 171.32 4.69E-28 55808000 6037.3 5962.8 6605.9 4619.6 5242.9 5283.6 6245.6 5570.3 5839.3 6371.2 TRUE FALSE 5523.795932 5574.620636 6157.509913 4975.402392 5034.064191 5582.752866 5828.96742 5521.599454 6446.316131 7160.512356 0.771424677 0.778522592 0.859925883 0.694838881 0.703031283 0.779658297 0.814043344 0.771117928 0.900259061 1 12.8058471 -8.475555635 1.892663969 1.000856448 0.769095422 0.729652923 0.045416739 0.182051731 1.444986937 0.046108394 0.013074109 3.35E-09 8.475555635 -0.231761026 EDKSPSEESAPTTS(ph)PESVSGSVPSSGSSGR ddPTM_A459_MK2206_30min_R2 1 EDKSPSEESAPTTSPESVSGSVPSSGSSGR 30 1 A0A494C0B4;P54725-2;P54725-3;P54725 A0A494C0B4 RAD23A UV excision repair protein RAD23 homolog A 1 EDKSPSEESAPT(0.006)T(0.379)S(0.604)PES(0.009)VS(0.001)GSVPSSGSSGR 138.19 2.50E-18 26244000 21558 20505 20927 22616 22322 20639 22762 19988 16395 23269 TRUE FALSE 23208.49706 19486.75152 21624.69574 20768.20045 21445.52612 21424.43161 19773.32206 22600.50023 17821.00746 22509.73444 1.031042686 0.865703306 0.960681957 0.922631962 0.952722307 0.951785178 0.878434266 1.004032291 0.791702253 1 14.45826142 EDLAAATPAS(ph)PLVLLPLETR ddPTM_A459_MK2206_30min_R2 2 EDLAAATPASPLVLLPLETR 20 0 A0A1B0GTL5 A0A1B0GTL5 1 EDLAAAT(0.144)PAS(0.856)PLVLLPLETR;EDLAAAT(0.346)PAS(0.654)PLVLLPLETR 95.429 0.0010556 3471200 19083.9 13494.9 14735.2 17094.3 10193.8 11066.4 12817.4 9982.8 8810 11067.9 TRUE FALSE 20544.97806 12824.76289 15226.46421 15697.64101 9793.540192 11487.53961 11134.45998 11287.58624 9576.277875 10706.75533 1.918879943 1.19781974 1.422136188 1.466143619 0.91470664 1.072924453 1.039947177 1.054249013 0.894414562 1 13.38623372 -1.522878745 0.361566096 0.959954752 11.39102151 0.719565402 0.160161971 35.6478526 0.49683464 0.131156961 256.2782852 0.03 1.522878745 10.43106676 EDLAYMNHIMVSVS(ph)PPEEHAMPIGR ddPTM_A459_MK2206_30min_R1 1 EDLAYMNHIMVSVSPPEEHAMPIGR 25 0 P41212 P41212 ETV6 Transcription factor ETV6 1 EDLAY(0.006)MNHIMVS(0.146)VS(0.848)PPEEHAMPIGR 41.758 0.048155 1861000 520.17 528.59 494.39 524.25 535.4 679.14 600.15 468.33 431.07 540.91 TRUE FALSE 475.92681 494.1786949 460.8321842 564.6278258 514.0738843 717.5923199 560.1150885 464.2354402 475.8812691 607.9220145 0.782874774 0.812898173 0.758044903 0.928783318 0.845624722 1.180401931 0.921360101 0.763643081 0.782799862 1 9.247742453 -5.765901246 24.99999832 0.915786216 0.787435162 0.229204631 0.111625235 185.6838111 1040401.162 0.033745377 0.05204691 1.71E-06 5.765901246 -0.128351053 EDLESS(ph)GLQR ddPTM_A459_MK2206_30min_R1 1 EDLESSGLQR 10 0 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 EDLES(0.12)S(0.88)GLQR 152.04 0.00064887 13508000 4316.6 4050.3 3729.8 3032.7 4213.4 4177.5 5070.8 4229 4271.5 4833.2 TRUE FALSE 3949.450503 3786.624734 3476.631568 3266.279079 4045.571356 4414.02644 4732.536184 4192.026299 4715.537711 5431.973305 0.727074726 0.69709929 0.640031048 0.601306173 0.74477011 0.812600908 0.871237011 0.771731756 0.868107674 1 12.40726067 -6.692916629 2.393075955 0.856668337 0.666938446 0.693848856 0.062506743 0.178435885 2.090591043 0.02323718 0.022410911 2.03E-07 6.692916629 -0.189729891 EDLESS(ph)GLQR ddPTM_A459_MK2206_30min_R2 1 EDLESSGLQR 10 0 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 EDLES(0.343)S(0.657)GLQR 139.31 0.0015418 30357000 133610 107680 114340 105890 97776 88070 107590 90543 72444 101420 TRUE FALSE 143839.2843 102332.7678 118152.0385 97238.44827 93936.82296 91421.56556 93463.30376 102377.281 78745.04817 98110.67371 1.466092107 1.043033993 1.204273032 0.99110978 0.95745773 0.931820791 0.952631352 1.043487697 0.802614488 1 16.58212248 -1.522878745 0.607168459 0.946543811 32.44382845 0.736106211 0.088238961 87.95371998 0.664509 0.037521929 3682.974048 0.03 1.522878745 31.49728464 EDLFIVS(ph)K ddPTM_A459_MK2206_30min_R2 2 EDLFIVSK 8 0 O60218;C9JRZ8;C9JRZ8-2 O60218 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 1 EDLFIVS(1)K;EDLFIVS(1)K 93.058 0.024595 1536900 24171 23466 25709 22538 19947.1 18198.5 25545 21974.4 24370 24471 TRUE FALSE 26021.55034 22300.71256 26566.12523 20696.5733 19163.87663 18891.05667 22190.91081 24846.52953 26489.65855 23672.51327 1.099230574 0.942050905 1.122235097 0.874287114 0.809541277 0.79801652 0.937412541 1.049594069 1.119004908 1 14.53092526 -10.31339841 13.91878263 1 0.964331075 0.000772106 0.116307639 0 0 0.122339178 0.029671609 4.86E-11 10.31339841 -0.035668925 EDLPAENGETKTEES(ph)PASDEAGEK ddPTM_A459_MK2206_30min_R1 1 EDLPAENGETKTEESPASDEAGEK 24 1 A6NL93;A6NEL0;P05114 A6NL93 HMGN1 Non-histone chromosomal protein HMG-14 1 EDLPAENGET(0.051)KT(0.051)EES(0.893)PAS(0.006)DEAGEK 89.511 3.51E-05 7075900 1935.7 2963.8 2390.7 2240.9 1684.1 1434 2244.2 1857.5 3276.1 3039.5 TRUE FALSE 1771.05855 2770.856081 2228.425945 2413.494506 1617.018731 1515.191841 2094.493513 1841.260073 3616.662319 3416.056207 0.518451232 0.811127193 0.652338782 0.70651487 0.47335835 0.443550032 0.613132041 0.539001691 1.058724476 1 11.738116 -8.263924141 24.99786495 1.029362303 0.599081457 0.730681822 0.105532238 122.3885729 1231246.777 0.093720382 0.028548777 5.45E-09 8.263924141 -0.430280846 EDLPAENGETKTEES(ph)PASDEAGEK ddPTM_A459_MK2206_30min_R2 2 EDLPAENGETKTEESPASDEAGEK 24 1 A6NL93;A6NEL0;P05114 A6NL93 HMGN1 Non-histone chromosomal protein HMG-14 1 EDLPAENGET(0.001)KT(0.01)EES(0.974)PAS(0.015)DEAGEK;EDLPAENGETKT(0.004)EES(0.897)PAS(0.099)DEAGEK 94.271 7.60E-06 23161000 170552 130682 145961 109794 101786 74349 171604 142909 78300 154987 TRUE FALSE 183609.5923 124192.5219 150827.2669 100823.479 97789.37021 77178.40329 149072.1887 161587.697 85110.39247 149929.7869 1.224637186 0.828337881 1.005986002 0.672471302 0.652234437 0.514763643 0.994280001 1.077755797 0.567668335 1 17.19392751 EDLPAENGETKTEESPAS(ph)DEAGEK ddPTM_A459_MK2206_30min_R2 1 EDLPAENGETKTEESPASDEAGEK 24 1 A6NL93;A6NEL0;P05114 A6NL93 HMGN1 Non-histone chromosomal protein HMG-14 1 EDLPAENGET(0.001)KT(0.004)EES(0.181)PAS(0.814)DEAGEK 76.693 0.00020807 17435000 58121 45922 53067 43252 38227 21781 57242 52468 27754 62025 TRUE FALSE 62570.78845 43641.58026 54836.22729 39718.17324 36726.0159 22609.89122 49726.05664 59325.74775 30167.99275 60001.12933 1.042826846 0.727345981 0.91391992 0.661957095 0.612088744 0.376824428 0.828752012 0.988743852 0.502790416 1 15.87270203 -1.735449784 1.002517135 0.710876776 199.9999371 0.17669761 0.195359593 1820.63257 3.990003647 0.063071913 831399.7636 0.018388666 1.735449784 199.2890603 EDLPAENGETKTEESPAS(ph)DEAGEKEAK ddPTM_A459_MK2206_30min_R1 1 EDLPAENGETKTEESPASDEAGEKEAK 27 2 A6NL93;A6NEL0;P05114 A6NL93 HMGN1 Non-histone chromosomal protein HMG-14 1 EDLPAENGET(0.001)KT(0.007)EES(0.186)PAS(0.806)DEAGEKEAK 62.707 0.0010454 7743400 5300.5 6232.2 6945.8 6288.9 4841.8 4346.2 5144.8 4694.8 4141.3 3814.4 TRUE FALSE 4849.664641 5826.482647 6474.338448 6773.272168 4648.940853 4592.278088 4801.599779 4653.753859 4571.802955 4286.956669 1.131260476 1.359118623 1.510241168 1.579972155 1.084438498 1.071221018 1.120048592 1.085561208 1.066444872 1 12.06573812 -6.286361008 22.82771265 1.077998533 1.400795456 0.665019884 0.112516133 165.0050726 151140.5877 0.037121677 0.042119799 5.17E-07 6.286361008 0.322796923 EDLPAENGETKTEESPAS(ph)DEAGEKEAK ddPTM_A459_MK2206_30min_R2 1 EDLPAENGETKTEESPASDEAGEKEAK 27 2 A6NL93;A6NEL0;P05114 A6NL93 HMGN1 Non-histone chromosomal protein HMG-14 1 EDLPAENGET(0.014)KT(0.013)EES(0.06)PAS(0.913)DEAGEKEAK 46.273 0.020058 9085700 42640 67289 59748 65849 57691 42794 72041 56214 49892 55983 TRUE FALSE 45904.55118 63947.52611 61739.9685 60468.92606 55425.76147 44422.55566 62581.93016 63561.36281 54231.51598 54156.27929 0.847631185 1.18079615 1.140033424 1.116563524 1.023441089 0.82026602 1.155580313 1.173665614 1.001389251 1 15.724841 -8.457625059 24.9988435 0.999986161 1.062052112 0.031783304 0.12259098 696.4953164 266828.6727 0.120422337 0.031092914 3.49E-09 8.457625059 0.06206595 EDLQELNDR ddPTM_A459_MK2206_30min_R1 1 EDLQELNDR 9 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 169.65 0.009513 6764600 2196.8 2539.8 2166.2 1678.8 2234.5 2076.2 2634.1 2040.5 2453.6 3031.9 FALSE TRUE 2009.950624 2374.458558 2019.164379 1808.101467 2145.495133 2193.75265 2458.383995 2022.660124 2708.6605 3407.514662 0.589858247 0.696830034 0.592562199 0.530621772 0.629636362 0.643798448 0.72145955 0.593588091 0.794907952 1 11.73450415 -8.817101684 0.839006021 1.003820955 0.615537451 0.815300928 0.05553809 0.441798257 0.593694555 0.055352269 0.019010696 1.52E-09 8.817101684 -0.388283504 EDLRLPEGDLGK ddPTM_A459_MK2206_30min_R1 2 EDLRLPEGDLGK 12 1 P63241;P63241-2;I3L397;I3L504 P63241 EIF5A Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A 0 ; 147.58 0.0017638 128040000 22435 21738.3 22207.6 18620.8 19439.7 18030.3 20654.4 19407.7 19281.2 16834.3 FALSE TRUE 20526.78544 20323.13272 20700.20999 20054.97724 18665.37558 19051.16 19276.58266 19238.02053 21285.54974 18919.86018 1.084933253 1.074169287 1.094099523 1.05999606 0.986549341 1.006939788 1.018854393 1.01681621 1.12503737 1 14.20761381 -6.022256188 8.325859177 1.025034549 1.082412813 0.356721701 0.035711202 0.26658689 88.5868761 0.010552797 0.014174815 9.50E-07 6.022256188 0.057378263 EDLRLPEGDLGK ddPTM_A459_MK2206_30min_R2 2 EDLRLPEGDLGK 12 1 P63241;P63241-2;I3L397;I3L504 P63241 EIF5A Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A 0 ; 129.34 0.0065454 39358000 195131 235430 226070 232920 237920 188253 255080 178988 191676 233360 FALSE TRUE 210070.3794 223738.8885 233607.061 213889.6909 228578.0653 195417.0998 221587.6896 202382.3462 208347.632 225745.4823 0.930562939 0.991111256 1.034824966 0.947481601 1.012547684 0.865652317 0.981581945 0.896506739 0.922931568 1 17.78433759 -6.733703071 24.99997895 0.929881568 0.984611283 0.231297176 0.04530018 292.2987661 263461.1564 0.014170351 0.014167309 1.85E-07 6.733703071 0.054729715 EDLSPAFDHS(ph)PNK ddPTM_A459_MK2206_30min_R1 3 EDLSPAFDHSPNK 13 0 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-2;P17706-4;P17706;P17706-3 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 EDLSPAFDHS(1)PNK;EDLS(0.001)PAFDHS(0.999)PNK;EDLSPAFDHS(1)PNK 143.05 0.00074275 38485400 13624.9 13236 13506.8 10843.3 9524.4 9435.5 12436.4 10301.7 13029.6 14407.6 TRUE FALSE 12466.03071 12374.33399 12589.99605 11678.45284 9145.02298 9969.729856 11606.79045 10211.63332 14384.07355 16192.52226 0.769863429 0.764200524 0.777519144 0.72122506 0.564768282 0.615699623 0.716799413 0.630638832 0.888315811 1 13.98304011 -8.452185384 3.931013333 0.998135209 0.695367751 0.692864802 0.068157256 0.12407646 3.648086444 0.073503002 0.019314861 3.53E-09 8.452185384 -0.302767459 EDLSPAFDHS(ph)PNK ddPTM_A459_MK2206_30min_R2 3 EDLSPAFDHSPNK 13 0 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-2;P17706-4;P17706;P17706-3 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 EDLS(0.006)PAFDHS(0.994)PNK;EDLS(0.001)PAFDHS(0.999)PNK;EDLSPAFDHS(1)PNK 109.16 0.0039887 136655400 543950 434043 470698 432633 456676 355647 607180 447535 353224 560630 TRUE FALSE 585595.2302 412489.0558 486390.8364 397285.5 438744.6056 369181.3958 527456.5366 506029.3611 383946.785 542336.689 1.079763258 0.76057745 0.896842951 0.732544023 0.80898935 0.680723623 0.972562888 0.933053897 0.707949126 1 19.04882925 -9.869701645 12.74463331 1.00000001 0.838362173 0.13167565 0.121917604 0 0 0.114284015 0.027717945 1.35E-10 9.869701645 -0.161637837 EDLVGPEVGAS(ph)PQSGR ddPTM_A459_MK2206_30min_R1 1 EDLVGPEVGASPQSGR 16 0 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 EDLVGPEVGAS(1)PQSGR 201.9 5.39E-07 13072000 4061.5 3492.6 3652.7 2302.6 3419.6 2777.4 3794.1 3198.6 3634.1 4709.4 TRUE FALSE 3716.048097 3265.231105 3404.764901 2479.946651 3283.390091 2934.653988 3541.002512 3170.634977 4011.8777 5292.836026 0.702090161 0.616915221 0.643277986 0.468547795 0.620346082 0.554457756 0.669017989 0.599042737 0.757982616 1 12.36982524 -8.639077345 1.757379622 1.00024937 0.603793569 0.795693173 0.061007096 0.218418762 1.419979346 0.058263175 0.016537759 2.30E-09 8.639077345 -0.396455801 EDLVGPEVGAS(ph)PQSGR ddPTM_A459_MK2206_30min_R2 1 EDLVGPEVGASPQSGR 16 0 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 EDLVGPEVGAS(1)PQSGR 181.86 1.36E-13 0 65717 61658 61518 65876 51972 53140 69914 54075 51073 69536 TRUE FALSE 70748.34405 58596.15338 63568.97942 60493.72007 49931.31814 55162.27994 60734.20782 61142.78817 55515.23722 67267.04601 1.051753395 0.871097467 0.945024097 0.899306922 0.742284984 0.820049091 0.902882041 0.908956046 0.825296196 1 16.03761228 -1.873218578 1.150465599 0.867804415 199.8072228 0.344184401 0.069056815 1992.554418 3.170205483 0.020673215 1045478.099 0.013390026 1.873218578 198.9394184 EDLVGPEVGAS(ph)PQSGRK ddPTM_A459_MK2206_30min_R1 2 EDLVGPEVGASPQSGRK 17 1 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 EDLVGPEVGAS(0.544)PQS(0.456)GRK;EDLVGPEVGAS(0.938)PQS(0.062)GRK 80.994 0.0081985 24027000 4517.8 4514.7 4238.1 3742.8 4877.5 3591 4607.3 5085.8 3505.2 3684.6 TRUE FALSE 4133.537386 4220.792209 3950.42958 4031.071105 4683.218847 3794.319317 4299.955423 5041.335387 3869.578083 4141.076065 0.998179536 1.019250104 0.95396209 0.973435658 1.130918334 0.916264096 1.038366684 1.217397437 0.934437818 1 12.01578999 -6.461554091 1.014862882 1.049971834 0.989586096 0.036147894 0.086183898 1.609954449 3.553633272 0.042698357 0.053129127 3.45E-07 6.461554091 -0.060385738 EDLVGPEVGAS(ph)PQSGRK ddPTM_A459_MK2206_30min_R2 1 EDLVGPEVGASPQSGRK 17 1 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 EDLVGPEVGAS(0.987)PQS(0.013)GRK 52.464 0.047108 15430000 43376 46618 58243 53646 57203 61651 48612 54005 55569 53271 TRUE FALSE 46696.89991 44303.01791 60184.79255 49262.95019 54956.9228 63997.17201 42229.18601 61063.63893 60402.29117 51532.77163 0.906159293 0.859705708 1.167893568 0.955953826 1.06644609 1.241873277 0.819462735 1.184947694 1.172114157 1 15.65320257 -5.248042397 24.73742029 1.074812774 0.882932466 0.292654745 0.120103093 845.1720632 1560595.256 0.029756923 0.077732709 5.65E-06 5.248042397 -0.191880309 EDLVGPEVGASPQS(ph)GR ddPTM_A459_MK2206_30min_R2 1 EDLVGPEVGASPQSGR 16 0 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 EDLVGPEVGAS(0.407)PQS(0.593)GR 149.24 0.00026499 17382000 69536 66693 77707 80598 57241 67111 67500 65262 58516 68151 TRUE FALSE 74859.72962 63381.1226 80297.7126 74012.88558 54993.43073 69664.95613 58637.16892 73791.96748 63605.61591 65927.23845 1.135490146 0.96137991 1.217974763 1.122645015 0.834153409 1.056694589 0.889422495 1.119294076 0.964785078 1 16.00858703 EDLVS(ph)EK ddPTM_A459_MK2206_30min_R1 1 EDLVSEK 7 0 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;A0A2R8Y4W8;A0A2R8YG73;A0A2R8Y4X4;A0A2R8YGU1 Q3V6T2 CCDC88A Girdin 1 EDLVS(1)EK 81.381 0.043132 6281500 1837.5 2066.6 2359.9 2001.3 2147.4 2034.4 2625.7 2424 1910.3 1891.4 TRUE FALSE 1681.210976 1932.063964 2199.716563 2155.440473 2061.864511 2149.58597 2450.544344 2402.807224 2108.882521 2125.720911 0.790889795 0.908898226 1.034809674 1.013980933 0.96996012 1.011226807 1.152806246 1.130349337 0.992078739 1 11.05373648 -3.815239573 0.67141488 1.058872039 4.94E-14 0.664066874 0.056451467 6.35852722 0.823232632 0.025513401 6.926086534 0.000153024 3.815239573 -1.058872039 EDMAALEKDYEEVGADSADGEDEGEEY ddPTM_A459_MK2206_30min_R1 1 EDMAALEKDYEEVGADSADGEDEGEEY 27 1 Q9BQE3;F5H5D3 Q9BQE3 TUBA1C Tubulin alpha-1C chain 0 61.039 0.011922 2376000 2911.9 3470.1 3563.7 4087.6 3886.9 3509.4 2327.2 3479.6 1661.4 1031.6 FALSE TRUE 2664.227614 3244.195859 3321.805973 4402.42766 3732.076542 3708.099195 2171.956734 3449.178224 1834.108475 1159.402396 2.297931782 2.798162113 2.86510187 3.79715246 3.218965697 3.198284916 1.873341595 2.974962132 1.581942975 1 10.17916566 -8.363875203 0.914484807 0.982730243 3.012765289 0.622235192 0.50025262 0.378827215 0.691140012 0.490954613 0.173807234 4.33E-09 8.363875203 2.030035047 EDMAALEKDYEEVGVDSVEGEGEEEGEEY ddPTM_A459_MK2206_30min_R1 1 EDMAALEKDYEEVGVDSVEGEGEEEGEEY 29 1 P68363;P68363-2 P68363 TUBA1B Tubulin alpha-1B chain 0 133.95 2.49E-13 3246400 1407.4 1429.6 1179.9 2102.6 1668.8 1184.3 1175.4 1523.5 490.82 325.24 FALSE TRUE 1287.693239 1336.53278 1099.811675 2264.542616 1602.328162 1251.354043 1096.991211 1510.1802 541.8424954 365.5331866 3.522780657 3.65639244 3.00878748 6.195176523 4.383536764 3.423366436 3.001071451 4.131444846 1.482334615 1 8.513858584 -8.319898803 4.278876917 1.055208327 3.926144448 0.600062451 0.874975712 0.159020844 5.726810332 0.868859452 0.235044222 4.79E-09 8.319898803 2.870936121 EDNLLFQNNLNK ddPTM_A459_MK2206_30min_R1 3 EDNLLFQNNLNK 12 0 Q86VD1-2;Q86VD1 Q86VD1-2 MORC1 MORC family CW-type zinc finger protein 1 0 ;; 83.045 0.019842 13130200 11375.1 17919.1 17820.6 14206.1 5429.1 5503.2 8537.6 10047.2 17722.8 15588.3 FALSE TRUE 10407.58801 16752.56333 16610.98732 15300.25628 5212.847451 5814.786428 7968.072282 9959.35839 19565.14848 17519.49629 0.594057491 0.956224029 0.948142974 0.873327408 0.29754551 0.331903745 0.454811722 0.568472873 1.116764327 1 14.09667368 -6.178600243 24.99998372 0.583178192 0.858545682 0.121051792 0.266010371 160.3061856 48376.69817 0.080471348 0.103888069 6.63E-07 6.178600243 0.27536749 EDNPEEPSKEIT(ph)SHEEGGGDVSPR ddPTM_A459_MK2206_30min_R2 1 EDNPEEPSKEITSHEEGGGDVSPR 24 1 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 EDNPEEPS(0.267)KEIT(0.365)S(0.365)HEEGGGDVS(0.003)PR 53.454 0.027706 8132800 6470.4 9321.4 8018.7 9484 8369.7 8769.6 8370.6 7622.4 6953.2 8982.7 TRUE FALSE 6965.778799 8858.512831 8286.039456 8709.126862 8041.063524 9103.333273 7271.530165 8618.673852 7557.976767 8689.595235 0.801622931 1.019439064 0.953558737 1.002247703 0.925366868 1.047613039 0.836808847 0.991838356 0.869773167 1 13.08507326 -4.747476404 24.99348988 0.959292837 0.801622533 0.361690231 0.063387216 775.7636355 1388524.154 0.014663123 0.298268657 1.79E-05 4.747476404 -0.157670304 EDNPEEPSKEITSHEEGGGDVS(ph)PR ddPTM_A459_MK2206_30min_R2 4 EDNPEEPSKEITSHEEGGGDVSPR 24 1 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 EDNPEEPS(0.165)KEIT(0.059)S(0.059)HEEGGGDVS(0.717)PR;EDNPEEPS(0.007)KEIT(0.01)S(0.015)HEEGGGDVS(0.967)PR;EDNPEEPSKEITS(0.001)HEEGGGDVS(0.999)PR;EDNPEEPSKEITSHEEGGGDVS(1)PR 73.616 0.00025889 23490500 115106 143544 125494 155759 151385 134004 163205 108668 118268 151959 TRUE FALSE 123918.6039 136415.8137 129677.9073 143032.9915 145440.8643 139103.6161 141775.9875 122871.2807 128554.7369 147000.5903 0.842980315 0.927995006 0.882159093 0.97300964 0.989389661 0.946279303 0.964458627 0.835855696 0.874518508 1 17.16546242 -3.743184077 1.252319429 0.93318848 3.73E-11 0.219496138 0.05085434 29.09105029 5.152523808 0.015947487 63.48778151 0.000180641 3.743184077 -0.93318848 EDNS(ph)EGEEILEEVGGDLEEEDDHHMEFCR ddPTM_A459_MK2206_30min_R1 1 EDNSEGEEILEEVGGDLEEEDDHHMEFCR 29 0 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;F5GWX5;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR 91.977 8.89E-07 6698300 489.19 444.83 467.62 315.87 351.04 264.96 495.54 421.84 444.25 571.17 TRUE FALSE 447.5818217 415.8714861 435.8792573 340.1983621 337.0573335 279.9618062 462.4834308 418.1518974 490.4313773 641.9308517 0.697243045 0.647844678 0.679012788 0.529961072 0.525067977 0.436124554 0.720456774 0.651397103 0.763994091 1 9.32627409 -8.611939841 1.115344863 0.998333509 0.595251187 0.687898613 0.082298829 0.375747872 0.999096217 0.084943996 0.026972605 2.44E-09 8.611939841 -0.403082322 EDPQARPLEGSSSEDSPPEGQAPPS(ph)HSPR ddPTM_A459_MK2206_30min_R1 2 EDPQARPLEGSSSEDSPPEGQAPPSHSPR 29 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 EDPQARPLEGSSSEDS(0.002)PPEGQAPPS(0.763)HS(0.234)PR;EDPQARPLEGSSSEDSPPEGQAPPS(0.876)HS(0.124)PR 115.44 8.12E-14 10575200 1028.31 893.19 1031.48 929.51 1175.09 995.07 774.11 838.49 597.94 722.3 TRUE FALSE 940.8468346 835.0431687 961.4660115 1001.101021 1128.283677 1051.410003 722.4705343 831.1591703 660.0980027 811.7839771 1.158986702 1.028651947 1.184386535 1.233211112 1.389881679 1.295184474 0.889978806 1.023867425 0.813144902 1 9.664952054 -7.266116688 24.98106099 0.933736723 1.213956303 0.646910622 0.102529879 287.1210726 1533477.497 0.046435504 0.032449708 5.42E-08 7.266116688 0.28021958 EDPQARPLEGSSSEDSPPEGQAPPS(ph)HSPR ddPTM_A459_MK2206_30min_R2 3 EDPQARPLEGSSSEDSPPEGQAPPSHSPR 29 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 EDPQARPLEGSSSEDSPPEGQAPPS(0.751)HS(0.249)PR;EDPQARPLEGSSSEDS(0.001)PPEGQAPPS(0.51)HS(0.49)PR;EDPQARPLEGSSSEDSPPEGQAPPS(0.557)HS(0.443)PR 123.51 7.25E-14 21634500 21017.7 45886 31158.1 46885 47636 54020 37989 25034.8 43430 35210 TRUE FALSE 22626.83127 43607.36796 32196.8955 43054.34552 45765.57129 56075.76895 33000.99867 28306.93432 47207.4629 34061.10058 0.664301238 1.280268906 0.945268795 1.264032717 1.343631606 1.646328744 0.968876463 0.831063408 1.385964108 1 15.05583743 -4.755199183 24.98982204 1.187359571 0.664300369 0.30446898 0.236097815 278.1358548 1113731.095 0.060995334 0.553495983 1.76E-05 4.755199183 -0.523059202 EDPQARPLEGSSSEDSPPEGQAPPSHS(ph)PR ddPTM_A459_MK2206_30min_R1 3 EDPQARPLEGSSSEDSPPEGQAPPSHSPR 29 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 EDPQARPLEGSSSEDSPPEGQAPPS(0.455)HS(0.544)PR;EDPQARPLEGSSSEDSPPEGQAPPS(0.254)HS(0.746)PR;EDPQARPLEGSSSEDS(0.014)PPEGQAPPS(0.275)HS(0.711)PR 135.12 4.53E-14 27845400 4002.1 3728.12 4279.88 3784.47 4407.83 3697.94 4182.63 3542.27 2656.53 2591.64 TRUE FALSE 3661.700379 3485.41871 3989.37367 4075.950535 4232.256797 3907.314167 3903.614384 3511.300307 2932.6858 2912.711929 1.257144705 1.196623214 1.36964237 1.39936617 1.453029651 1.341469484 1.340199264 1.205508953 1.006857482 1 11.50814731 -8.08920762 2.311248749 0.992547461 1.340419585 0.794625826 0.0672725 0.153103819 1.473262355 0.066198062 0.021098333 8.14E-09 8.08920762 0.347872124 EDPQARPLEGSSSEDSPPEGQAPPSHS(ph)PR ddPTM_A459_MK2206_30min_R2 1 EDPQARPLEGSSSEDSPPEGQAPPSHSPR 29 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 EDPQARPLEGSSSEDSPPEGQAPPS(0.045)HS(0.955)PR 120.59 7.56E-14 9167300 10536 26813 16237 21740 27340 31001 24150 16736 21600 19095 TRUE FALSE 11342.64426 25481.50541 16778.33348 19963.77246 26266.49423 32180.76478 20979.07599 18923.45266 23478.72896 18471.93171 0.614047542 1.379471612 0.908315044 1.080762574 1.421967915 1.742143988 1.135727238 1.024443624 1.271048925 1 14.17304712 -4.752446295 24.92830635 1.225156349 0.614046322 0.372718786 0.234978081 395.5298043 1096302.384 0.062210809 0.737159273 1.77E-05 4.752446295 -0.611110027 EDQEAAELLS(ph)EPEEESER ddPTM_A459_MK2206_30min_R1 2 EDQEAAELLSEPEEESER 18 0 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 EDQEAAELLS(1)EPEEESER;EDQEAAELLS(0.999)EPEEES(0.001)ER 290.18 9.57E-81 46101000 4606.6 5139.6 4931.6 3309 4099.7 4902.8 6007.3 4507.6 5835.4 7000.5 TRUE FALSE 4214.78448 4805.011106 4596.856732 3563.859753 3936.400268 5180.392299 5606.563978 4468.190528 6442.010712 7867.774791 0.535702227 0.610720468 0.584263893 0.452969213 0.500319388 0.658431696 0.712598432 0.567910324 0.81878433 1 12.94173995 -8.608219861 0.60863011 1.009198037 0.544938201 0.797006442 0.070020757 0.440671889 0.37168915 0.078476263 0.032658287 2.46E-09 8.608219861 -0.464259837 EDQEAAELLS(ph)EPEEESER ddPTM_A459_MK2206_30min_R2 2 EDQEAAELLSEPEEESER 18 0 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 EDQEAAELLS(1)EPEEESER;EDQEAAELLS(1)EPEEESER 206.64 1.94E-11 75393000 152906 131598 121937 146131 132814 123979 165562 121418 108915 142540 TRUE FALSE 164612.6009 125063.0347 126002.3187 134191.6299 127599.055 128697.1077 143823.5105 137287.7495 118388.2298 137888.9315 1.193805762 0.906983855 0.913795744 0.973186378 0.925375617 0.93333893 1.043038836 0.9956401 0.858576744 1 17.07314713 -4.755058553 24.99979345 0.951068252 1.193806166 0.671304623 0.051176728 131.2287317 514100.254 0.012908148 0.118437889 1.76E-05 4.755058553 0.242737914 EDQTEYLEER ddPTM_A459_MK2206_30min_R1 2 EDQTEYLEER 10 0 P07900;P07900-2;G3V2J8;P08238;Q58FF7;Q58FF6 P07900;P08238;Q58FF6 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 0 ; 141.89 0.017448 147800200 5332.5 5893.9 5715.8 4477.4 5204.5 5365.4 6402.2 4618.4 6458.2 5819.2 FALSE TRUE 4878.942873 5510.206039 5327.827421 4822.250124 4997.193744 5669.184311 5975.120919 4578.021816 7129.553001 6540.126429 0.746001308 0.842522862 0.814636763 0.73733286 0.764082132 0.866830997 0.91360939 0.699989804 1.090124645 1 12.67510281 -8.269947008 24.99905876 1.045062358 0.803134444 0.699810473 0.064625772 384.1949179 1128915.332 0.058619356 0.016113978 5.37E-09 8.269947008 -0.241927913 EDQTEYLEER ddPTM_A459_MK2206_30min_R2 2 EDQTEYLEER 10 0 P07900;P07900-2;G3V2J8;P08238;Q58FF7;Q58FF6 P07900;P08238;Q58FF6 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 0 ; 195.51 0.0023269 291170000 101823 104796 88632 106615 93351 92045 105959 92359 73527 95064 FALSE TRUE 109618.6472 99591.98303 91586.94664 97904.21346 89685.57069 95547.83697 92046.45602 104430.6384 79922.24555 91962.06947 1.191998482 1.08296805 0.995920896 1.064615162 0.975245242 1.03899181 1.000917623 1.135583823 0.869078371 1 16.48875131 -4.837110457 2.258436949 1.016058325 1.224970619 0.43032503 0.064474666 0.493578411 3.314153272 0.015786905 0.19973355 1.46E-05 4.837110457 0.208912294 EDQTEYLEERR ddPTM_A459_MK2206_30min_R1 3 EDQTEYLEERR 11 1 P07900;P07900-2;G3V2J8;P08238;Q58FF7 P07900;P08238 HSP90AA1;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ;; 177.83 8.46E-05 29296100 9644.1 9542.8 11002.8 10804.7 13032.4 8965.8 7936 12648.9 4665.5 3339.85 FALSE TRUE 8823.818652 8921.561986 10255.96059 11636.87987 12513.29191 9473.435848 7406.60392 12538.312 5150.495421 3753.615833 2.350751661 2.376791441 2.732288292 3.100178704 3.333663451 2.52381604 1.973191784 3.340329048 1.372142396 1 11.87406529 -8.400415225 5.183783143 1.020764985 2.704412922 0.681102895 0.421551151 0.126972013 4.482578953 0.421497137 0.10972402 3.98E-09 8.400415225 1.683647937 EDRPIS(ph)FYQLGSNQLQSNAVSLAR ddPTM_A459_MK2206_30min_R2 2 EDRPISFYQLGSNQLQSNAVSLAR 24 1 O43150;O43150-2 O43150 ASAP2 "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2" 1 EDRPIS(0.537)FY(0.455)QLGS(0.006)NQLQS(0.002)NAVSLAR;EDRPIS(0.915)FY(0.084)QLGS(0.001)NQLQSNAVSLAR 61.256 0.0038848 6150700 9646.4 9673.7 9061.4 11083.8 10288.8 10565.4 10524.6 7910.3 10334.3 7721.1 TRUE FALSE 10384.9358 9193.318125 9363.502553 10178.21808 9884.810015 10967.4737 9142.707378 8944.20337 11233.15873 7469.161139 1.390375118 1.230836764 1.253621709 1.362698956 1.323416356 1.468367531 1.224060802 1.197484323 1.503938464 1 12.86673051 -10.68501883 4.790534407 0.999968873 1.321320191 0.493729125 0.099510089 3.25E-05 5.68E-06 0.094615002 0.022945288 2.07E-11 10.68501883 0.321351319 EDS(ph)FVWYMDNPQNLPSGS(ph)SRVGAIK ddPTM_A459_MK2206_30min_R2 1 EDSFVWYMDNPQNLPSGSSRVGAIK 25 1 Q5RGS4;Q9HB21-2;R4GMZ9;Q9HB21 Q5RGS4;Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 2 EDS(0.912)FVWY(0.088)MDNPQNLPS(0.025)GS(0.516)S(0.459)RVGAIK 59.792 0.014443 23736000 1999.5 14379 10178 21154 18113 26262 10692 9903.2 18029 3287.3 TRUE FALSE 2152.583257 13664.95977 10517.32944 19425.65053 17401.79261 27261.41881 9288.127557 11197.58224 19597.12983 3180.03567 0.676905381 4.297108959 3.307299204 6.108626615 5.472200445 8.572677051 2.920762067 3.52121278 6.162550318 1 11.63482723 -4.783782389 1.936309527 4.906132553 1.45E-32 0.241740537 2.019551956 1.151821556 4.650606636 0.539284102 10.27826259 1.65E-05 4.783782389 -4.906132553 EDS(ph)GSSSPPGVFLEK ddPTM_A459_MK2206_30min_R2 1 EDSGSSSPPGVFLEK 15 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 EDS(0.441)GS(0.232)S(0.188)S(0.14)PPGVFLEK 83.499 0.023369 11447000 9836.7 8016.4 8920.5 10860 8745.9 7781.3 10679 6916.5 10096 11008 TRUE FALSE 10589.80532 7618.317233 9217.905018 9972.703261 8402.492021 8077.422824 9276.834472 7820.510298 10974.13183 10648.80986 0.994459048 0.715414899 0.865627722 0.936508717 0.789054564 0.758528223 0.871161622 0.734402285 1.030550078 1 13.37840458 -8.278173886 24.62481364 1.015275111 0.8310589 0.428187898 0.08416072 697.4812605 1026331.179 0.076349982 0.019944427 5.27E-09 8.278173886 -0.184216211 EDS(ph)GTFSLGK ddPTM_A459_MK2206_30min_R1 1 EDSGTFSLGK 10 0 G5E9Q4;O75569 G5E9Q4 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A 1 EDS(0.464)GT(0.464)FS(0.071)LGK 163.46 0.00039167 54226000 4747.4 4240.3 5086.4 3689.5 3566.2 3041.8 3840.7 3514.9 5066.1 4580.7 TRUE FALSE 4343.6087 3964.255699 4741.14934 3973.665929 3424.150702 3214.024087 3584.493911 3484.1696 5592.739224 5148.191699 0.843715416 0.770028766 0.920934887 0.771856637 0.665117172 0.624301556 0.696262711 0.67677542 1.086350228 1 12.32985006 -8.264389002 24.99395605 1.043175151 0.745182645 0.656858285 0.085877829 177.8352706 1506865.551 0.080318339 0.024246734 5.44E-09 8.264389002 -0.297992506 EDS(ph)GTFSLGK ddPTM_A459_MK2206_30min_R2 2 EDSGTFSLGK 10 0 G5E9Q4;O75569 G5E9Q4 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A 1 EDS(0.9)GT(0.025)FS(0.075)LGK;EDS(0.972)GT(0.024)FS(0.004)LGK 160.72 0.00043736 107142000 487390 475070 468360 372800 350670 309090 524760 358470 292310 369760 TRUE FALSE 524704.9531 451478.7146 483974.8886 342341.0475 336900.9338 320852.6365 455858.3817 405323.2598 317734.5954 357694.7615 1.46690701 1.262189898 1.353038794 0.957075933 0.941867117 0.897001217 1.274434045 1.133154028 0.888284173 1 18.44836946 -5.754758833 24.99082343 1.021746074 1.350859811 0.640418676 0.119166336 109.4750621 409523.2132 0.034559627 0.058143201 1.76E-06 5.754758833 0.329113737 EDS(ph)LRSHK ddPTM_A459_MK2206_30min_R1 1 EDSLRSHK 8 1 Q9NTW7-6;Q9NTW7-4;Q9NTW7-5 Q9NTW7-6 1 EDS(0.999)LRS(0.001)HK 87.181 0.018055 3833000 8038.9 3625.1 4179 5152.3 3792.8 7465.8 5389.6 2785.2 3899.2 5958.9 TRUE FALSE 7355.149341 3389.105331 3895.341123 5549.131039 3641.724745 7888.507144 5030.069618 2760.84929 4304.535793 6697.133519 1.098253353 0.506053123 0.581643044 0.828583008 0.543773651 1.177893067 0.751077995 0.41224343 0.642743015 1 12.70932802 -4.741276638 24.4743871 0.707101433 1.098255147 0.207990316 0.223169344 1847.521972 2242448.302 0.056189031 2.186799982 1.81E-05 4.741276638 0.391153714 EDS(ph)PGPEVQPMDK ddPTM_A459_MK2206_30min_R1 1 EDSPGPEVQPMDK 13 0 O75382-3;O75382-2;O75382;E9PMW5;E9PMK8 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 EDS(1)PGPEVQPMDK 186.08 0.00013049 2953000 1833.7 1838.4 2011.1 1602.7 1035.2 1323.1 1474.4 1730.6 1949.3 2290 TRUE FALSE 1677.734186 1718.719826 1874.592135 1726.140232 993.9657919 1398.012779 1376.045466 1715.469547 2151.936711 2573.702489 0.651875729 0.667800507 0.72836396 0.67068367 0.386200735 0.543191291 0.534655996 0.666537626 0.83612489 1 11.32962958 -8.399656307 2.076613511 0.995198919 0.597840369 0.673111296 0.091330072 0.19728907 1.747150302 0.097648698 0.027545127 3.98E-09 8.399656307 -0.39735855 EDS(ph)PGPEVQPMDK ddPTM_A459_MK2206_30min_R2 2 EDSPGPEVQPMDK 13 0 O75382-3;O75382-2;O75382;E9PMW5;E9PMK8 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 EDS(1)PGPEVQPMDK;EDS(1)PGPEVQPMDK 142.95 0.00074834 7721300 71162 54955 63344 59452 50176 38513 65121 48596 41132 65980 TRUE FALSE 76610.21743 52226.01461 65455.85734 54594.58142 48205.83813 39978.6392 56570.53448 54947.66406 44709.58701 63827.078 1.200277685 0.818242292 1.025518626 0.855351414 0.755256854 0.6263586 0.886309326 0.860883277 0.700479928 1 15.96188098 -1.522880343 0.791288541 0.806633919 85.20518692 0.44092784 0.119304798 445.6556565 1.611892057 0.042662746 67364.1787 0.02999989 1.522880343 84.398553 EDS(ph)RGSLIPEGATGFPDQGNTGENTR ddPTM_A459_MK2206_30min_R1 1 EDSRGSLIPEGATGFPDQGNTGENTR 26 1 A0A0J9YW64;A6NIW2;Q5JSL3 A0A0J9YW64 DOCK11 Dedicator of cytokinesis protein 11 1 EDS(0.748)RGS(0.252)LIPEGATGFPDQGNTGENTR 106.5 1.78E-08 5970300 494.01 422.54 482.16 455.58 357.76 340.52 384.62 296.63 307.25 328.57 TRUE FALSE 451.9918554 395.0325692 449.4323226 490.6688505 343.5096616 359.7999481 358.9627016 294.0365952 339.189737 369.2757322 1.223995557 1.069749607 1.217064333 1.328732998 0.930225389 0.974339543 0.972072276 0.796252149 0.918527018 1 8.528554645 -6.2802092 24.40843547 0.92584562 1.200388663 0.751210161 0.078248866 312.1621567 405937.2604 0.025487298 0.028953116 5.25E-07 6.2802092 0.274543043 EDSAPPSS(ph)VAR ddPTM_A459_MK2206_30min_R1 1 EDSAPPSSVAR 11 0 Q9BZE4-2;Q9BZE4;Q9BZE4-3 Q9BZE4-2 GTPBP4 Nucleolar GTP-binding protein 1 1 EDSAPPS(0.297)S(0.703)VAR 107.17 0.010702 4016000 2919.6 3323.6 2735 2073.7 2960.8 2807.9 2561.6 2656.9 2251.9 2635 TRUE FALSE 2671.272689 3107.233036 2549.35582 2233.416733 2842.865066 2966.880871 2390.720338 2633.671003 2485.993064 2961.443693 0.902017045 1.049229146 0.860848993 0.754164848 0.959959182 1.001835989 0.807282051 0.889319966 0.839453091 1 11.53208494 -7.274641498 24.80711692 0.874790456 0.918562177 0.03651092 0.088344659 2663.608336 5004966.959 0.038283743 0.025981473 5.31E-08 7.274641498 0.043771721 EDSAPPSS(ph)VAR ddPTM_A459_MK2206_30min_R2 2 EDSAPPSSVAR 11 0 Q9BZE4-2;Q9BZE4;Q9BZE4-3 Q9BZE4-2 GTPBP4 Nucleolar GTP-binding protein 1 1 EDS(0.002)APPS(0.039)S(0.959)VAR;EDS(0.006)APPS(0.136)S(0.858)VAR 109.39 0.0094245 15224300 94598 88032 91760 97071 100188 100467 104023 73203 80485 102291 TRUE FALSE 101840.4956 83660.45889 94819.2326 89139.98879 96254.11572 104290.3421 90364.65515 82770.88344 87485.43982 98953.25305 1.029177844 0.845454357 0.958222491 0.900829291 0.972723107 1.053935458 0.913205502 0.836464501 0.88410878 1 16.59445952 -7.511679135 24.97542907 0.891138979 0.95522491 0.108736798 0.067398726 1010.818961 2254167.971 0.029516977 0.018550949 3.08E-08 7.511679135 0.064085932 EDSGLFS(ph)PIR ddPTM_A459_MK2206_30min_R1 4 EDSGLFSPIR 10 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 EDSGLFS(1)PIR;EDSGLFS(1)PIR;EDSGLFS(1)PIR;EDSGLFS(1)PIR 152.67 0.00062478 66011000 15595.8 15744 15184.4 12393.7 15180.2 12631.9 14467.1 12610.5 12025 10888.1 TRUE FALSE 14269.29531 14719.06274 14153.72523 13348.26492 14575.54049 13347.10726 13502.02616 12500.24773 13275.04178 12237.00003 1.166077901 1.202832614 1.156633587 1.090811873 1.191104066 1.09071727 1.103377145 1.021512438 1.084828124 1 13.5789623 -7.230802803 0.35724337 0.996000185 1.201494534 0.707018876 0.035018799 0.776625853 0.245015546 0.04208363 0.057114662 5.88E-08 7.230802803 0.205494349 EDSGLFS(ph)PIR ddPTM_A459_MK2206_30min_R2 6 EDSGLFSPIR 10 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 EDSGLFS(1)PIR;EDS(0.001)GLFS(0.999)PIR;EDSGLFS(1)PIR;EDSGLFS(1)PIR;EDS(0.006)GLFS(0.994)PIR;EDSGLFS(1)PIR 163.46 0.00039167 48064900 97739 110685.2 96960.3 109052.4 107819.8 101230.7 106597.6 75199.9 76607.6 87485.8 TRUE FALSE 105221.973 105188.7339 100192.908 100142.4701 103586.2529 105083.1052 92601.20707 85028.78513 83270.79057 84631.14551 1.243300824 1.242908072 1.183877489 1.183281515 1.223973187 1.241659966 1.094174095 1.004698502 0.983926072 1 16.36890107 -7.513797066 2.628312553 0.994030923 1.217874474 0.953147395 0.022370473 0.061177722 0.846555492 0.013351308 0.007379455 3.06E-08 7.513797066 0.223843551 EDSGSS(ph)SPPGVFLEK ddPTM_A459_MK2206_30min_R1 1 EDSGSSSPPGVFLEK 15 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 EDSGSS(0.5)S(0.5)PPGVFLEK 172.82 6.05E-09 0 2518.1 2537.4 2026.5 1670.7 2036 2114.3 2749.8 1958 2452.1 2432.5 TRUE FALSE 2303.922372 2372.214799 1888.946826 1799.377603 1954.901809 2234.009839 2566.365859 1940.881412 2707.00457 2733.856464 0.842737138 0.867717391 0.690945867 0.65818291 0.715071122 0.817164276 0.938734675 0.70994269 0.990178016 1 11.41672178 -7.002604662 5.360346434 0.885206996 0.752909701 0.352496511 0.096604289 0.233377985 21.86526288 0.036977979 0.030671799 9.94E-08 7.002604662 -0.132297295 EDSGSS(ph)SPPGVFLEKDYEIYR ddPTM_A459_MK2206_30min_R1 1 EDSGSSSPPGVFLEKDYEIYR 21 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 EDS(0.028)GS(0.107)S(0.433)S(0.433)PPGVFLEKDYEIYR 77.037 0.0014801 4215200 809.95 700.52 1005.7 1172.3 1186.5 705.58 805.79 825.46 485.01 323.79 TRUE FALSE 741.0594993 654.9160207 937.435886 1262.590749 1139.239193 745.5293298 752.0372193 818.2430902 535.4285251 363.9035497 2.036417342 1.799696709 2.5760559 3.469575249 3.130607529 2.048700351 2.066583907 2.248516375 1.471347354 1 8.507412314 -8.283039026 0.954636866 0.99721125 2.540097646 0.510495706 0.485633144 0.496463948 0.952200169 0.524505693 0.184649232 5.21E-09 8.283039026 1.542886396 EDSGSSS(ph)PPGVFLEK ddPTM_A459_MK2206_30min_R1 2 EDSGSSSPPGVFLEK 15 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 EDSGS(0.002)S(0.125)S(0.873)PPGVFLEK;EDSGSS(0.007)S(0.993)PPGVFLEK 157.37 0.00015532 14906000 4827 5075.8 4317.8 3819.7 4155.1 4601.5 5615.2 4615.6 4500.7 4489.1 TRUE FALSE 4416.438302 4745.364497 4024.719766 4113.893956 3989.593568 4862.032953 5240.620254 4575.246296 4968.563871 5045.243599 0.875366712 0.940562017 0.797725558 0.815400461 0.790763318 0.963686462 1.03872492 0.906843487 0.984801581 1 12.30070821 -6.840388856 7.191131393 0.977951932 0.845405914 0.641063214 0.050497771 0.161893862 12.35771667 0.018944962 0.016741437 1.44E-07 6.840388856 -0.132546018 EDSGSSS(ph)PPGVFLEK ddPTM_A459_MK2206_30min_R2 1 EDSGSSSPPGVFLEK 15 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 EDSGSS(0.297)S(0.703)PPGVFLEK 147.12 0.00033021 7674600 24002 25055 23268 26650 25555 21784 27233 19613 20552 25289 TRUE FALSE 25839.61157 23810.80513 24043.74351 24472.60975 24551.5823 22613.00538 23657.27439 22176.48644 22339.57581 24463.822 1.05623772 0.973306834 0.982828583 1.000359214 1.00358735 0.924344748 0.967031005 0.9065013 0.913167853 1 14.57836219 -6.75565591 24.99386952 0.937916687 1.000302995 0.462808963 0.032648497 124.6574638 538719.6749 0.010630187 0.010354765 1.76E-07 6.75565591 0.062386308 EDSGT(ph)FSLGK ddPTM_A459_MK2206_30min_R2 1 EDSGTFSLGK 10 0 G5E9Q4;O75569 G5E9Q4 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A 1 EDS(0.243)GT(0.757)FSLGK 144.7 0.0022266 48557000 229480 261910 196570 197860 173960 158010 251670 216000 135020 192460 TRUE FALSE 247049.1652 248903.9303 203123.5457 181694.2051 167129.4563 164023.1813 218625.4267 244231.9416 146763.7955 186180.046 1.326936858 1.33689907 1.091005992 0.975905899 0.897676523 0.88099227 1.17426884 1.311805142 0.788289608 1 17.50633893 -5.343949811 3.361498316 1.015428485 1.337838904 0.454039174 0.141139221 0.23277939 5.011014451 0.040160874 0.098891003 4.53E-06 5.343949811 0.322410419 EDSGTFS(ph)LGK ddPTM_A459_MK2206_30min_R1 1 EDSGTFSLGK 10 0 G5E9Q4;O75569 G5E9Q4 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A 1 EDS(0.074)GT(0.038)FS(0.888)LGK 160.91 0.00043418 60157000 4718.5 4117.1 4109.4 3678.4 2932.4 2800.5 4267 3204.6 4570.7 4445 TRUE FALSE 4317.166797 3849.076042 3830.465377 3961.711005 2815.596299 2959.06189 3982.356216 3176.58252 5045.840621 4995.680158 0.864179984 0.770480879 0.766755528 0.793027352 0.563606198 0.592324127 0.797159964 0.635865872 1.010040768 1 12.2864654 -8.271680307 24.63946637 1.005020476 0.721118459 0.60059413 0.092008535 458.9122525 1104118.862 0.089886224 0.024302577 5.35E-09 8.271680307 -0.283902017 EDSGTFS(ph)LGK ddPTM_A459_MK2206_30min_R2 1 EDSGTFSLGK 10 0 G5E9Q4;O75569 G5E9Q4 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A 1 EDS(0.039)GT(0.102)FS(0.859)LGK 131.42 0.0026131 64585000 222490 254820 240590 200870 218590 157540 242160 203010 125750 206440 TRUE FALSE 239524.0055 242166.0093 248611.1505 184458.2784 210007.0583 163535.2951 210364.1011 229544.104 136687.5077 199703.8797 1.199395855 1.212625462 1.244898952 0.923658963 1.05159228 0.818888924 1.053380142 1.149422357 0.684450938 1 17.60750284 -5.759666207 24.99997117 0.963227674 1.218338676 0.488646401 0.123761552 39.82678243 561499.097 0.033068057 0.05370739 1.74E-06 5.759666207 0.255111002 EDSQRPGAHLTVK ddPTM_A459_MK2206_30min_R1 1 EDSQRPGAHLTVK 13 1 F8W6I7;P09651-2;P09651;P09651-3;F8VZ49;F8W646;Q32P51;F8VYN5 F8W6I7 HNRNPA1;HNRNPA1L2 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2" 0 74.537 0.038991 18499000 10689 5739.3 7730.3 5398.1 12972 11881 12803 9136 5657 5388 FALSE TRUE 9779.84442 5365.670527 7205.588774 5813.862597 12455.29777 12553.69195 11948.93523 9056.124915 6245.065394 6055.506117 1.615033365 0.886081266 1.189923457 0.96009524 2.056854956 2.07310367 1.973234772 1.495519076 1.031303622 1 12.56403183 -6.247495708 24.95873423 1.671595303 1.14495747 0.214480071 0.402097161 1084.70353 1941584.799 0.122554791 0.157395145 5.66E-07 6.247495708 -0.526637833 EDSQRPGAHLTVK ddPTM_A459_MK2206_30min_R2 2 EDSQRPGAHLTVK 13 1 F8W6I7;P09651-2;P09651;P09651-3;F8VZ49;F8W646;Q32P51;F8VYN5 F8W6I7 HNRNPA1;HNRNPA1L2 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2" 0 ; 76.24 0.036259 47378000 86974 159514 126822 220506 201761 206211 207931 137152 171258 139802 FALSE TRUE 93632.79631 151592.7667 131050.1822 202489.9544 193838.8494 214058.5041 180629.4099 155078.2373 186153.7113 135240.2722 0.692344039 1.120914386 0.969017439 1.497260773 1.433292364 1.582801488 1.335618503 1.146686817 1.376466553 1 17.0451653 -5.746047945 23.20765213 1.358949056 0.94677356 0.504661902 0.185761151 84.26527756 127054.7306 0.050287868 0.086581645 1.79E-06 5.746047945 -0.412175496 EDSSGMHHENQTYPPYS(ph)PQAQPQPIHR ddPTM_A459_MK2206_30min_R2 3 EDSSGMHHENQTYPPYSPQAQPQPIHR 27 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 EDSSGMHHENQTY(0.003)PPY(0.433)S(0.565)PQAQPQPIHR;EDSSGMHHENQTYPPY(0.064)S(0.936)PQAQPQPIHR;EDSSGMHHENQTY(0.012)PPY(0.451)S(0.537)PQAQPQPIHR 108.99 7.58E-10 52974100 42304.4 61296.9 41570.6 73179.5 57576.5 71176 67906.3 59761 53110.4 51642.5 TRUE FALSE 45543.25739 58252.98508 42956.54306 67200.50076 55315.75731 73884.65256 58990.12124 67571.96789 57729.84659 49957.40945 0.911641694 1.166052958 0.859863302 1.345155834 1.107258321 1.478952839 1.18080825 1.35259151 1.155581269 1 15.60841105 -5.767307307 24.99992528 1.249193963 0.997872675 0.368883274 0.149378472 136.2527932 580499.0877 0.03870799 0.059179429 1.71E-06 5.767307307 -0.251321288 EDSVKPGAHLTVK ddPTM_A459_MK2206_30min_R2 1 EDSVKPGAHLTVK 13 1 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 77.644 0.034007 9941400 51128 107400 87590 136110 132920 137900 137130 107850 105820 84849 FALSE TRUE 55042.39899 102066.6722 90510.20688 124989.3776 127700.8929 143147.8811 119124.6663 121946.3653 115024.0323 82080.38408 0.670591392 1.243496523 1.102702039 1.522767943 1.555802819 1.743996239 1.451317116 1.48569438 1.401358359 1 16.32474986 -4.540727483 0.977262137 1.479277217 2.77E-14 0.550230482 0.201748408 2.086828979 1.166004229 0.064794782 3.637442303 2.88E-05 4.540727483 -1.479277217 EDTEEHHLR ddPTM_A459_MK2206_30min_R1 6 EDTEEHHLR 9 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8VZ49;Q32P51;A0A2R8Y4L2;F8VYN5;P22626;P22626-2;A0A087WUI2 F8W6I7;P22626 HNRNPA1;HNRNPA1L2;HNRNPA2B1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoproteins A2/B1" 0 ;;;;; 153.24 0.0014348 245697940 23414.07 19679.75 17157.14 18141.463 9981.17 13138.94 24190.28 26051.124 867.68 15962.73 FALSE TRUE 21422.58039 18398.5947 15992.56114 19538.72162 9583.598863 13882.85543 22576.59056 25823.36177 957.878441 17940.3135 1.194102901 1.025544771 0.891431531 1.089095886 0.5341935 0.773835721 1.258427873 1.439404153 0.053392514 1 14.13091748 -4.666495611 1.297221849 0.894884661 1.389242201 0.068281308 0.364665118 5.852024507 7.184223368 0.107490081 4.134244101 2.16E-05 4.666495611 0.49435754 EDTEEHHLR ddPTM_A459_MK2206_30min_R2 5 EDTEEHHLR 9 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8VZ49;Q32P51;A0A2R8Y4L2;F8VYN5;P22626;P22626-2;A0A087WUI2 F8W6I7;P22626 HNRNPA1;HNRNPA1L2;HNRNPA2B1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoproteins A2/B1" 0 ;;;; 140.45 0.003221 470554950 510275.2 474252.8 491808.1 483961.7 444052.5 413606.6 498584 475516.3 445309.1 478675.5 FALSE TRUE 549342.2616 450702.0956 508204.7366 444420.481 426616.7677 429346.689 433119.3219 537667.9131 484041.2806 463056.3576 1.186339962 0.973320176 1.097500829 0.959754625 0.921306361 0.927201801 0.935349045 1.161128455 1.045318291 1 18.82082827 -3.070277993 1.86893104 1.000564937 97.69327256 0.337660289 0.075452748 902.5111981 7.687052043 0.021718295 372417.8574 0.000850593 3.070277993 96.69270762 EDTEEYNLR ddPTM_A459_MK2206_30min_R2 2 EDTEEYNLR 9 0 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ; 172.25 0.007034 47761000 87329 94223 91994 103755 75477 80689 109797 67572 69033 96378 FALSE TRUE 94014.97538 89544.02283 95061.03405 95277.8846 72513.39374 83759.67644 95380.52201 76403.89241 75037.36556 93233.19375 1.008385228 0.960430714 1.019605038 1.021930932 0.7777637 0.898389008 1.0230318 0.819492386 0.804835301 1 16.50855607 -6.22743957 24.98513656 0.88557246 1.000792269 0.358202955 0.075596476 734.4722902 539735.0639 0.022756389 0.029376775 5.92E-07 6.22743957 0.115219809 EDTS(ph)LPSLSK ddPTM_A459_MK2206_30min_R1 2 EDTSLPSLSK 10 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 EDT(0.021)S(0.775)LPS(0.202)LS(0.003)K;EDT(0.017)S(0.983)LPSLSK 124.12 0.0039394 13139800 11914.8 8692.2 9638.8 8375.9 9096.7 8135.2 8300.9 9124.2 8223.4 8412.7 TRUE FALSE 10901.38369 8126.3362 8984.545111 9021.013269 8734.359176 8595.807994 7747.162107 9044.428081 9078.251858 9454.928789 1.15298422 0.859481481 0.950249897 0.95410695 0.923788996 0.909135138 0.819378155 0.956583416 0.960160786 1 13.20685088 -4.751742839 24.99631694 0.922246782 1.152984681 0.647950328 0.050156787 244.2235253 629529.9642 0.012442149 0.159245772 1.77E-05 4.751742839 0.230737899 EDTS(ph)LPSLSK ddPTM_A459_MK2206_30min_R2 1 EDTSLPSLSK 10 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 EDT(0.018)S(0.976)LPS(0.006)LSK 84.718 0.045856 0 117100 70383 85402 86277 99475 78636 91121 59381 76500 95509 TRUE FALSE 126065.266 66887.88257 88249.26006 79227.89311 95569.11168 81628.54808 79156.70324 67142.30059 83153.83172 92392.54915 1.364452731 0.72395321 0.955155593 0.857513878 1.034381155 0.883497088 0.856743363 0.726706874 0.900005817 1 16.49548889 -4.749936965 24.9915684 0.878995907 1.364453803 0.691929363 0.096558514 291.1355215 632517.2327 0.023746224 0.368298881 1.78E-05 4.749936965 0.485457896 EDVEVAES(ph)PLR ddPTM_A459_MK2206_30min_R1 3 EDVEVAESPLR 11 0 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 EDVEVAES(1)PLR;EDVEVAES(1)PLR;EDVEVAES(1)PLR 166.24 0.00060471 164710600 9613.3 9538.1 8875.9 7633.27 8754.1 8374.3 9666.7 8347 7079.5 7790.3 TRUE FALSE 8795.638354 8917.167956 8273.428638 8221.185778 8405.40566 8848.445629 9021.852081 8274.023059 7815.439359 8755.421178 1.004593403 1.0184739 0.944949246 0.93898233 0.960022995 1.010624783 1.030430393 0.945017137 0.892640023 1 13.09596087 -7.971453625 24.64566847 0.937156167 0.984740445 0.186606436 0.038090402 260.0069433 224478.1439 0.021785714 0.010465262 1.07E-08 7.971453625 0.047584278 EDVEVAES(ph)PLR ddPTM_A459_MK2206_30min_R2 2 EDVEVAESPLR 11 0 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 EDVEVAES(1)PLR;EDVEVAES(1)PLR 164.22 0.00064843 205850000 205905 220192 210062 215509 238961 213624 248056 175093 193176 249936 TRUE FALSE 221669.2451 209257.5855 217065.3622 197901.2253 229578.1905 221753.611 215485.9492 197978.2563 209978.0993 241780.6088 0.916819782 0.865485394 0.89777821 0.818515704 0.94953103 0.917168718 0.891245788 0.818834303 0.868465426 1 17.88333902 -6.270526656 24.97504474 0.898149225 0.875647204 0.073135245 0.051134419 2559.709013 7034963.862 0.016043582 0.018490058 5.36E-07 6.270526656 -0.022502021 EDVEVAES(ph)PLRVLAETPDSFEK ddPTM_A459_MK2206_30min_R1 1 EDVEVAESPLRVLAETPDSFEK 22 1 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 EDVEVAES(1)PLRVLAETPDSFEK 106.39 0.00036628 0 1017.1 818.9 840.66 1432.9 1151.1 708.7 494.91 1090.5 181.77 90.878 TRUE FALSE 930.590304 765.5894612 783.5983414 1543.262206 1105.24925 748.8259816 461.8954569 1080.965873 200.665642 102.1366527 9.111227743 7.495736747 7.672058173 15.10977857 10.82127933 7.331608796 4.522328122 10.58352555 1.964678072 1 6.674356874 -8.278761638 0.776814609 0.785309235 9.709337247 0.513916423 2.813262025 0.549862429 0.730127934 2.830780035 1.110879361 5.26E-09 8.278761638 8.924028012 EDYDSVEQDGDEPGPQR ddPTM_A459_MK2206_30min_R2 3 EDYDSVEQDGDEPGPQR 17 0 Q9Y5S9;Q9Y5S9-2 Q9Y5S9 RBM8A RNA-binding protein 8A 0 ;; 303.7 2.59E-88 9244300 30440 33727.2 26068.4 27215 30222.3 24929.5 24504.3 23863.5 24593.4 31245.9 FALSE TRUE 32770.5098 32052.35629 26937.50745 24991.44744 29035.62065 25878.20959 21286.85598 26982.54139 26732.48948 30226.34884 1.084170304 1.060411115 0.891192899 0.826809999 0.960606284 0.856147387 0.704248339 0.892682789 0.884410142 1 14.8835191 -5.268981258 3.726641356 0.865619376 1.079786307 0.521309009 0.074746344 0.163428632 5.088814628 0.020029681 0.052882328 5.38E-06 5.268981258 0.214166931 EDYFEPIS(ph)PDR ddPTM_A459_MK2206_30min_R1 2 EDYFEPISPDR 11 0 Q69YN4-3;Q69YN4;Q69YN4-4;Q69YN4-2 Q69YN4-3 KIAA1429 Protein virilizer homolog 1 EDYFEPIS(1)PDR;EDYFEPIS(1)PDR 95.094 0.021564 3890800 964.85 1161.96 965.78 569.34 913.01 1161.54 1205.45 900.79 1461.68 2171.8 TRUE FALSE 882.7844409 1086.316193 900.2255444 613.1906654 876.6428784 1227.305391 1125.03663 892.914488 1613.626867 2440.85898 0.361669579 0.445054877 0.368815057 0.25121921 0.359153431 0.502817 0.460918324 0.365819777 0.661089756 1 11.25317323 -8.560914199 2.276928544 0.999795081 0.389332534 0.891118939 0.066943548 0.107650217 1.307682441 0.070416173 0.019307306 2.75E-09 8.560914199 -0.610462547 down EEAATGGGS(ph)TGEADGK ddPTM_A459_MK2206_30min_R1 2 EEAATGGGSTGEADGK 16 0 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 1 EEAAT(0.03)GGGS(0.744)T(0.226)GEADGK;EEAAT(0.031)GGGS(0.769)T(0.199)GEADGK 247.5 3.00E-29 6076800 3847 4200.5 4151.8 2717.5 2895.4 3021.7 4214.5 3347.3 4253.7 5675.3 TRUE FALSE 3519.792449 3927.046687 3869.987384 2926.802321 2780.070087 3192.786043 3933.358395 3318.034909 4695.887337 6378.39901 0.551830082 0.615679057 0.606733348 0.458861591 0.435857036 0.500562294 0.616668601 0.520198706 0.736217243 1 12.63897864 -8.577931161 2.136638897 1.000039661 0.536630089 0.849916704 0.060562082 0.145134568 1.519281803 0.064498685 0.017817551 2.64E-09 8.577931161 -0.463409571 EEAATGGGST(ph)GEADGK ddPTM_A459_MK2206_30min_R2 1 EEAATGGGSTGEADGK 16 0 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 1 EEAAT(0.002)GGGS(0.276)T(0.721)GEADGK 213.02 5.72E-08 9996900 32869 23167 24855 27653 22431 19878 28192 24273 18162 29511 TRUE FALSE 35385.47591 22016.56047 25683.65329 25393.66144 21550.24623 20634.47122 24490.35654 27445.56444 19741.69793 28548.05849 1.239505514 0.77121043 0.899663748 0.889505724 0.754876071 0.722797707 0.857864171 0.96138112 0.691525063 1 14.80110501 -4.755873919 24.99903213 0.835392511 1.239506156 0.604471029 0.097216497 119.3419036 536006.0659 0.023414692 0.20002156 1.75E-05 4.755873919 0.404113645 EEAENTLQS(ph)FR ddPTM_A459_MK2206_30min_R1 2 EEAENTLQSFR 11 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 EEAENTLQS(1)FR;EEAENTLQS(1)FR 137.62 0.0013177 6491400 2383.7 2440.9 2439.9 2201.1 2384.8 2446.2 3708.1 1983.63 2607.5 3076.9 TRUE FALSE 2180.953798 2281.996966 2274.286386 2370.629103 2289.808366 2584.70173 3460.739415 1966.287332 2878.558956 3458.089601 0.630681691 0.659901052 0.65767133 0.685531428 0.662159929 0.74743631 1.000766265 0.568605085 0.832413063 1 11.75575954 -6.940050177 4.707134295 0.822005531 0.662068464 0.373556815 0.114021984 0.257006166 11.59055631 0.040545012 0.035176603 1.15E-07 6.940050177 -0.159937067 EEAENTLQS(ph)FR ddPTM_A459_MK2206_30min_R2 1 EEAENTLQSFR 11 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 EEAENTLQS(1)FR 126.5 0.0031469 2016400 9509.2 7389 8297.8 9123.2 10873 9614.8 7109.2 5794.8 4305 7104.3 TRUE FALSE 10237.23166 7022.073005 8574.444511 8377.805376 10446.07139 9980.697951 6175.7535 6552.200257 4679.441118 6872.487273 1.489596307 1.02176588 1.247647929 1.219035415 1.519984101 1.45226867 0.898619853 0.953395764 0.680894839 1 12.74661661 -7.276161542 22.8763128 0.87934374 1.311787628 0.650312177 0.158531164 179.2389301 278511.3424 0.068574732 0.046521859 5.29E-08 7.276161542 0.432443888 EEAENTLQS(ph)FRQDVDNASLAR ddPTM_A459_MK2206_30min_R2 1 EEAENTLQSFRQDVDNASLAR 21 1 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 EEAENT(0.251)LQS(0.749)FRQDVDNASLAR 60.332 0.011174 3711500 1074.5 2226.2 2481.4 2654.3 2883.9 2868 2241.5 2423.8 2702.7 2059.7 TRUE FALSE 1156.764546 2115.650145 2564.128638 2437.435199 2770.663596 2977.14375 1947.188357 2740.598982 2937.775961 1992.492158 0.580561656 1.061811027 1.286895222 1.223309808 1.39055182 1.494180912 0.977262746 1.37546287 1.474422847 1 10.96035833 -4.693612495 1.731136396 1.293974942 0.216963919 0.61401061 0.167586464 0.759279082 1.924744322 0.045109169 1.459853081 2.02E-05 4.693612495 -1.077011023 EEAENTLQSFR ddPTM_A459_MK2206_30min_R1 3 EEAENTLQSFR 11 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 ;; 199.68 0.00026593 102404000 4873.2 4533.2 4858.9 4349.73 5604.6 4468 4997.4 4511.6 4533.4 3750.24 FALSE TRUE 4458.70875 4238.087856 4529.091406 4684.746958 5381.356914 4720.974299 4664.032564 4472.155557 5004.663153 4214.848044 1.057857532 1.005513796 1.074556273 1.111486561 1.276761785 1.120081732 1.106571937 1.061047874 1.187388751 1 12.0412649 -5.63325226 3.111860908 1.131723687 1.033020668 0.213388072 0.070019989 0.348222775 6.68007074 0.019871827 0.038062782 2.33E-06 5.63325226 -0.098703019 EEAENTLQSFR ddPTM_A459_MK2206_30min_R2 4 EEAENTLQSFR 11 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 ;;; 238.86 2.84E-09 189757000 369207 346436 359169 393157 384437 314331 395354 276317 354534 396201 FALSE TRUE 397473.7718 329232.492 371143.5152 361034.8155 369342.0717 326293.0865 343443.5449 312432.5806 385370.7265 383272.9938 1.03705134 0.859002584 0.9683529 0.941978228 0.963652743 0.851333362 0.896080732 0.815169828 1.005473208 1 18.54801282 -6.729307152 24.95023752 0.900963796 0.948858184 0.062664117 0.068612204 444.2005804 344914.5439 0.021393503 0.021391965 1.87E-07 6.729307152 0.047894388 EEAGGGIS(ph)EEEAAQYDR ddPTM_A459_MK2206_30min_R2 1 EEAGGGISEEEAAQYDR 17 0 A0A590UK93;A0A590UKC5;M0QZS6;B3KNJ4;Q9UBE0-2;Q9UBE0-3;Q9UBE0;M0R375 A0A590UK93 SAE1 "SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed" 1 EEAGGGIS(1)EEEAAQYDR 178.51 8.53E-08 8359300 4711.6 6586.7 5405.2 6366.4 6116.8 6556.8 6439.7 5791.1 4466.7 6034 TRUE FALSE 5072.323719 6259.614056 5585.40667 5846.244755 5876.623698 6806.323619 5594.159655 6548.016654 4855.205492 5837.111074 0.868978447 1.072382207 0.9568786 1.00156476 1.006769209 1.16604319 0.95837814 1.121790655 0.831782269 1 12.51103881 -4.747905494 24.93206158 1.017443486 0.86897807 0.190616167 0.088479225 1067.847427 1967065.722 0.020570017 0.401231839 1.79E-05 4.747905494 -0.148465416 EEAIEHNYGGHDDDLSVR ddPTM_A459_MK2206_30min_R2 2 EEAIEHNYGGHDDDLSVR 18 0 Q93009;H3BND8;A0A669KBL1;Q93009-3;F5H2X1 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase 0 ; 112.91 0.00067807 12817400 69808 69294 62389 79629 70052 75615 79263 53325 56697 72566 FALSE TRUE 75152.55415 65852.96072 64469.01812 73123.05598 67301.4065 78492.58181 68855.67289 60294.76059 61628.40258 70198.17736 1.070577 0.93810072 0.918385926 1.041666019 0.958734386 1.118156977 0.980875508 0.858922024 0.877920266 1 16.09914595 -7.624210974 6.447992716 0.902405194 1.003631545 0.284316501 0.066851125 0.260915197 14.31229176 0.032013805 0.018258198 2.38E-08 7.624210974 0.101226351 EEAPAS(ph)PLRPLYPQIS(ph)PLK ddPTM_A459_MK2206_30min_R1 2 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 2 EEAPAS(1)PLRPLY(0.402)PQIS(0.598)PLK;EEAPAS(1)PLRPLY(0.01)PQIS(0.99)PLK 76.351 0.017257 74489000 14816.1 16258.1 15363.8 11782.3 11544.5 11705.9 14960.2 12531.6 17732.4 19040.9 TRUE FALSE 13555.91289 15199.69473 14320.94806 12689.77479 11084.65812 12368.67794 13962.23235 12422.03754 19575.74644 21399.83044 0.633458893 0.710271737 0.669208483 0.592984829 0.517978783 0.577980184 0.652445934 0.580473643 0.914761754 1 14.38531175 -8.353390181 3.983654537 0.992901155 0.617234523 0.871711963 0.052562646 0.08154875 2.208666438 0.056214353 0.014969525 4.43E-09 8.353390181 -0.375666631 EEAPAS(ph)PLRPLYPQIS(ph)PLK ddPTM_A459_MK2206_30min_R2 2 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 2 EEAPAS(0.999)PLRPLY(0.018)PQIS(0.982)PLK;EEAPAS(1)PLRPLY(0.002)PQIS(0.998)PLK 87.72 0.006497 26334000 232783 198559 215059 178513 178850 150483 228624 200425 162638 245886 TRUE FALSE 250605.0455 188698.8488 222228.9597 163927.9169 171827.4504 156209.736 198605.3942 226621.2357 176783.9593 237862.76 1.053569905 0.793309759 0.934273863 0.689170162 0.72238063 0.65672212 0.834957915 0.952739452 0.743218313 1 17.85976989 -10.6164374 15.02187528 0.999999629 0.81542847 0.165922411 0.120648906 0 0 0.119373796 0.028952398 2.42E-11 10.6164374 -0.184571159 EEAPAS(ph)PLRPLYPQISPLK ddPTM_A459_MK2206_30min_R1 2 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 1 EEAPAS(0.572)PLRPLY(0.362)PQIS(0.065)PLK;EEAPAS(0.999)PLRPLY(0.001)PQISPLK 82.406 0.0028343 241840000 7887.4 7992.2 7806.9 5704.2 7122.3 6543.5 8872.8 6997.6 8603.6 10043.4 TRUE FALSE 7216.535212 7471.906327 7276.989379 6143.538472 6838.603709 6913.987315 8280.911701 6936.420721 9497.975008 11287.65222 0.639330046 0.661953982 0.644685825 0.544270709 0.605848194 0.612526607 0.733625695 0.614514036 0.841448233 1 13.46245782 -8.473555138 2.267942466 1.000816089 0.630179227 0.86922933 0.046643057 0.097950259 1.119196332 0.046637138 0.012873763 3.36E-09 8.473555138 -0.370636862 EEAPAS(ph)PLRPLYPQISPLK ddPTM_A459_MK2206_30min_R2 4 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 1 EEAPAS(1)PLRPLYPQISPLK;EEAPAS(1)PLRPLYPQISPLK;EEAPAS(0.992)PLRPLY(0.007)PQIS(0.001)PLK;EEAPAS(0.944)PLRPLY(0.054)PQIS(0.002)PLK 76.586 0.0047337 304559600 676138 696588.7 678671 715358.8 568403.2 566307.3 672399 662604.6 498473.4 742318 TRUE FALSE 727903.6451 661997.1181 701297.5524 656911.6977 546084.8344 587858.5211 584112.2036 749209.2963 541829.7153 718096.2245 1.01365753 0.92187801 0.976606656 0.9147962 0.760461921 0.818634747 0.813417734 1.043327163 0.754536366 1 19.45381765 -6.004581758 12.56966858 0.8600798 0.962501081 0.211587562 0.090874442 0.539968287 1461.620931 0.025519377 0.036005849 9.90E-07 6.004581758 0.102421282 EEAPASPLRPLYPQIS(ph)PLK ddPTM_A459_MK2206_30min_R1 2 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 1 EEAPAS(0.008)PLRPLY(0.005)PQIS(0.986)PLK;EEAPAS(0.008)PLRPLY(0.007)PQIS(0.985)PLK 70.358 0.0088565 111421000 4294.3 5073.9 5256.1 4179.8 3422.8 3536.6 4363.5 3813.6 4170 4507.7 TRUE FALSE 3929.047235 4743.588188 4899.330576 4501.72892 3286.462628 3736.839236 4072.418877 3780.258097 4603.486422 5066.147907 0.775549255 0.936330379 0.967072155 0.888590109 0.648710359 0.737609581 0.803849187 0.746179971 0.908675883 1 12.30667348 -6.034348792 24.96367989 0.789091539 0.902404053 0.123946956 0.102286046 918.7237491 667699.6459 0.029452659 0.03804401 9.24E-07 6.034348792 0.113312514 EEAPASPLRPLYPQIS(ph)PLK ddPTM_A459_MK2206_30min_R2 2 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 1 EEAPAS(0.029)PLRPLY(0.02)PQIS(0.95)PLK;EEAPAS(0.005)PLRPLY(0.016)PQIS(0.979)PLK 56.25 0.0299 60148500 194783 217433 230299 175499 205975 173941 220967 166821 136160.1 205380 TRUE FALSE 209695.7362 206635.5934 237977.0537 161160.1703 197887.3866 180560.4466 191953.7675 188625.0775 148003.0594 198678.4674 1.055452757 1.040050269 1.197799927 0.811160728 0.996018286 0.908807326 0.96615285 0.949398694 0.744937593 1 17.600076 -5.76190734 25 0.914575152 1.091995906 0.501996759 0.085168281 10.41664396 556549.7117 0.022883702 0.036428392 1.73E-06 5.76190734 0.177420754 EEAS(ph)DDDMEGDEAVVR ddPTM_A459_MK2206_30min_R1 4 EEASDDDMEGDEAVVR 16 0 O75643;A0A494C1A5;O75643-2 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 1 EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR 252.12 5.48E-29 154415000 12946.6 14588 13551.6 10117.6 12063 11386 15531.5 12342.2 13944.4 14990.5 TRUE FALSE 11845.42368 13638.31855 12631.75515 10896.85931 11582.50517 12030.66548 14495.42197 12234.29345 15393.97028 16847.63631 0.703091132 0.809509316 0.749764235 0.646788612 0.68748547 0.714086253 0.860383125 0.726172694 0.913716915 1 14.04025858 -8.419695065 0.916205243 1.003173759 0.724127683 0.698785931 0.058592747 0.335534468 0.621996526 0.057746465 0.020245454 3.80E-09 8.419695065 -0.279046077 EEAS(ph)DDDMEGDEAVVR ddPTM_A459_MK2206_30min_R2 7 EEASDDDMEGDEAVVR 16 0 O75643;A0A494C1A5;O75643-2 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 1 EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR 270.21 1.79E-50 966133600 808623 739492 749907.1 788989 784196 710445.8 794352.3 619139 626291.7 825759 TRUE FALSE 870531.7986 702769.9026 774908.6284 724526.0748 753404.5248 737482.3128 690052.8888 700062.5931 680765.42 798814.5515 1.089779595 0.879766025 0.97007325 0.907001598 0.94315323 0.92322093 0.863846168 0.876376866 0.852219603 1 19.60750109 -4.755457214 24.97630947 0.910332654 1.089779891 0.578461692 0.045264786 139.4571752 582193.7439 0.011181649 0.099040349 1.76E-05 4.755457214 0.179447237 EEAS(ph)PVPLTSNVGSTVK ddPTM_A459_MK2206_30min_R2 3 EEASPVPLTSNVGSTVK 17 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 EEAS(0.999)PVPLT(0.001)SNVGSTVK;EEAS(1)PVPLTSNVGSTVK;EEAS(0.739)PVPLT(0.093)S(0.168)NVGSTVK 188.84 6.93E-08 9055800 79978.1 60432.2 59368.2 56662.1 51573.3 48147.8 70303.4 50329.9 44900.1 70017 TRUE FALSE 86101.28483 57431.22482 61347.50616 52032.62518 49548.27311 49980.09827 61072.47913 56908.19074 48805.42954 67732.35102 1.271198822 0.847914238 0.905734191 0.768209347 0.731530389 0.737905853 0.901673694 0.840192166 0.720563051 1 16.04755745 -3.978609432 1.483327299 0.810690103 4.25096448 0.692548431 0.087806441 5.877160367 1.987956106 0.024029978 52.7649208 0.000105049 3.978609432 3.440274376 EEAS(ph)SPLK ddPTM_A459_MK2206_30min_R1 3 EEASSPLK 8 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 EEAS(0.624)S(0.376)PLK;EEAS(0.871)S(0.129)PLK;EEAS(0.5)S(0.5)PLK 133.99 0.0029199 42832900 29427.2 29978.4 28764.5 23247.1 21357.1 22123.3 28830.2 23066.1 15573.8 32543.2 TRUE FALSE 26924.26211 28026.80071 26812.04588 25037.59567 20506.40148 23375.90213 26906.98996 22864.43552 17192.75224 36574.8973 0.736140471 0.766285151 0.733072349 0.684556828 0.560668737 0.639124204 0.73566823 0.625140115 0.470069734 1 15.15856619 -10.76407919 5.08900528 1.000046133 0.66460862 0.574480291 0.087433232 4.87E-05 7.26E-06 0.090070688 0.021842353 1.72E-11 10.76407919 -0.335437514 EEAS(ph)SPLK ddPTM_A459_MK2206_30min_R2 2 EEASSPLK 8 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 EEAS(0.5)S(0.5)PLK;EEAS(0.649)S(0.351)PLK 128.35 0.0043517 49696000 646470 504830 494120 457680 502200 356240 596500 421420 342010 566630 TRUE FALSE 695964.2403 479760.8763 510593.7142 420286.08 482481.1046 369796.9628 518178.8335 476501.041 371757.4116 548140.9095 1.269681259 0.875250995 0.931500834 0.766748244 0.880213639 0.674638503 0.945338734 0.869303919 0.678215045 1 19.06418729 EEASDYLELDTIK ddPTM_A459_MK2206_30min_R2 1 EEASDYLELDTIK 13 0 P14625;Q96GW1;A0A1W2PRR1 P14625 HSP90B1 Endoplasmin 0 169.65 4.41E-06 0 7416.8 10310 11018 8844.9 12458 9115.6 11442 8305.3 8609.2 9915.2 FALSE TRUE 7984.635911 9798.020392 11385.33462 8122.243377 11968.83632 9462.500546 9939.651656 9390.831226 9358.012654 9591.667836 0.832455424 1.02151373 1.187002596 0.846801986 1.247836823 0.986533386 1.036279803 0.979061346 0.975639775 1 13.22756598 -4.766831286 5.810691352 1.035771031 0.824818894 0.23740804 0.106826567 0.185405683 22.37456246 0.02506947 0.15561018 1.71E-05 4.766831286 -0.210952137 EEASLLSHS(ph)PGTSNQS(ph)QPCSPKPIR ddPTM_A459_MK2206_30min_R2 1 EEASLLSHSPGTSNQSQPCSPKPIR 25 1 Q9H4Z3 Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 2 EEAS(0.002)LLS(0.016)HS(0.549)PGT(0.246)S(0.246)NQS(0.306)QPCS(0.635)PKPIR 66.045 0.0015986 11885000 36478 42337 42684 49275 48541 46662 59500 44995 41282 47859 TRUE FALSE 39270.78373 40234.60614 44107.06326 45249.07488 46635.03644 48437.75511 51687.57853 50876.00099 44872.63374 46297.36475 0.848229353 0.869047436 0.95269058 0.977357461 1.00729354 1.046231365 1.116425931 1.09889626 0.96922652 1 15.49864246 -5.571617441 0.898622755 1.055081594 0.824344784 0.741858016 0.041925854 0.434642389 0.572955381 0.017587225 0.078380308 2.68E-06 5.571617441 -0.23073681 EEASLLSHS(ph)PGTSNQSQPCSPKPIR ddPTM_A459_MK2206_30min_R1 3 EEASLLSHSPGTSNQSQPCSPKPIR 25 1 Q9H4Z3 Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 1 EEASLLS(0.011)HS(0.558)PGT(0.213)S(0.213)NQSQPCS(0.005)PKPIR;EEASLLSHS(0.994)PGT(0.003)S(0.003)NQSQPCSPKPIR;EEASLLS(0.095)HS(0.4)PGT(0.301)S(0.091)NQS(0.015)QPCS(0.098)PKPIR 151.96 1.56E-10 13513800 4665.55 3422.6 3894.4 3300.08 5291.46 5581.79 5937.9 4910.85 3285.55 3201.69 TRUE FALSE 4268.720473 3199.788118 3630.058978 3554.252733 5080.689943 5897.826126 5541.793525 4867.914956 3627.09468 3598.339529 1.18630286 0.889240188 1.008815024 0.987748017 1.411954015 1.63904103 1.540097448 1.352822578 1.007991228 1 11.81311561 -6.259293794 24.84756912 1.369384004 1.008169518 0.339604387 0.204276014 182.3044917 2111225.284 0.063227902 0.077624707 5.50E-07 6.259293794 -0.361214486 EEASLLSHS(ph)PGTSNQSQPCSPKPIR ddPTM_A459_MK2206_30min_R2 3 EEASLLSHSPGTSNQSQPCSPKPIR 25 1 Q9H4Z3 Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 1 EEASLLS(0.018)HS(0.979)PGT(0.003)SNQSQPCSPKPIR;EEASLLS(0.015)HS(0.984)PGTSNQSQPCSPKPIR;EEASLLS(0.001)HS(0.518)PGT(0.136)S(0.136)NQS(0.005)QPCS(0.204)PKPIR 103.71 4.28E-07 72334500 96770 183193 153507 231311 215644 222732 212616 171784 190768 157250 TRUE FALSE 104178.7856 174095.902 158624.8468 212412.1514 207176.733 231208.2223 184699.2638 194236.7586 207360.6558 152118.9454 0.684850827 1.144472186 1.042768515 1.396355667 1.361939057 1.519917337 1.214176599 1.276874213 1.363148129 1 17.21484032 -4.446673093 1.035458592 1.314804203 1.24E-18 0.594124472 0.147087218 2.187723497 1.199510603 0.045604474 3.751129017 3.58E-05 4.446673093 -1.314804203 EEASLLSHSPGT(ph)SNQSQPCS(ph)PKPIR ddPTM_A459_MK2206_30min_R2 1 EEASLLSHSPGTSNQSQPCSPKPIR 25 1 Q9H4Z3 Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 2 EEAS(0.008)LLS(0.036)HS(0.385)PGT(0.501)S(0.349)NQS(0.114)QPCS(0.606)PKPIR 55.208 0.019517 9712200 15389 23205 17049 31156 24694 21724 27718 20262 22130 20607 TRUE FALSE 16567.19367 22052.67344 17617.40515 28610.45514 23724.38948 22550.72204 24078.5933 22910.31297 24054.8274 19934.59528 0.831077503 1.106251375 0.883760363 1.435216253 1.190111419 1.131235509 1.207879717 1.149274046 1.206687523 1 14.28298669 -5.730355139 24.99999627 1.193321633 0.956951808 0.468765896 0.120654035 177.8987551 143076.6331 0.031196263 0.054026376 1.86E-06 5.730355139 -0.236369825 EEASLLSHSPGTSNQSQPCS(ph)PKPIR ddPTM_A459_MK2206_30min_R1 1 EEASLLSHSPGTSNQSQPCSPKPIR 25 1 Q9H4Z3 Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 1 EEASLLSHS(0.004)PGT(0.013)S(0.013)NQS(0.226)QPCS(0.744)PKPIR 58.858 0.0037729 8882600 1355.4 826.41 1086 914.23 1440.1 1550.3 1355.3 1349.3 1006.2 804.13 TRUE FALSE 1240.116113 772.6105588 1012.285346 984.644153 1382.737768 1638.076646 1264.89041 1337.503212 1110.798091 903.7516953 1.372186762 0.854892514 1.120092334 1.089507393 1.529997426 1.812529542 1.399599488 1.479945453 1.22909655 1 9.819782638 -6.253738815 23.95688843 1.452278995 1.091787231 0.276608371 0.230060268 369.793507 1150445.51 0.067252014 0.085067626 5.58E-07 6.253738815 -0.360491765 EEASLLSHSPGTSNQSQPCS(ph)PKPIR ddPTM_A459_MK2206_30min_R2 1 EEASLLSHSPGTSNQSQPCSPKPIR 25 1 Q9H4Z3 Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 1 EEAS(0.008)LLS(0.183)HS(0.158)PGT(0.103)S(0.103)NQS(0.103)QPCS(0.343)PKPIR 48.872 0.024597 17312000 2876.7 9887.3 5359.4 12592 8346.9 10779 9542 7627.8 6350.5 5329.3 TRUE FALSE 3096.942364 9396.311059 5538.079721 11563.19332 8019.158766 11189.2024 8289.123938 8624.77965 6902.855011 5155.405377 0.600717526 1.822613426 1.074227789 2.242926108 1.555485588 2.170382653 1.607851048 1.672958578 1.338954846 1 12.33187016 -4.755619812 24.88489458 1.649376019 0.600715724 0.373270555 0.389063362 178.3312815 762475.8486 0.091034216 0.79225299 1.76E-05 4.755619812 -1.048660295 EEATS(ph)PGAK ddPTM_A459_MK2206_30min_R2 1 EEATSPGAK 9 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 EEAT(0.163)S(0.837)PGAK 86.189 0.034176 2726000 36022 19285 22749 29208 38375 24677 35452 222690 86811 42116 TRUE FALSE 38779.87202 18327.33494 23507.44031 26821.61297 36868.20468 25616.10053 30797.10981 251796.3476 94361.66386 40741.75837 0.951845811 0.449841531 0.576986395 0.658332238 0.904924239 0.628743126 0.755910178 6.180301432 2.316092079 1 15.31422063 -7.586510092 24.99222415 3.442562177 0.686944679 0.455824357 1.221493497 46.77239232 18369.78944 0.528147967 0.304926353 2.59E-08 7.586510092 -2.755617498 EEATYGVWAERDS(ph)DDERPSFGGK ddPTM_A459_MK2206_30min_R1 1 EEATYGVWAERDSDDERPSFGGK 23 2 Q9UBB9;F6XM96;F6UKU9;F6SQZ1 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 EEAT(0.002)Y(0.004)GVWAERDS(0.972)DDERPS(0.022)FGGK 59.792 0.0046874 5980900 1964.5 2383.7 2161.4 2512.9 2134.8 1947.1 2227.7 2195.3 2555.5 2128 TRUE FALSE 1797.408959 2228.520697 2014.69019 2706.443993 2049.766395 2057.343119 2079.094198 2176.106724 2821.15337 2391.632706 0.75154055 0.931798888 0.842391135 1.131630282 0.857057353 0.860225366 0.869320023 0.909883327 1.179593072 1 11.22378013 -8.198553129 8.57456047 1.089290742 0.898189455 0.378128405 0.10022888 0.346439918 44.58576021 0.067085714 0.025147754 6.33E-09 8.198553129 -0.191101286 EEATYGVWAERDS(ph)DDERPSFGGK ddPTM_A459_MK2206_30min_R2 3 EEATYGVWAERDSDDERPSFGGK 23 2 Q9UBB9;F6XM96;F6UKU9;F6SQZ1 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 EEAT(0.006)Y(0.001)GVWAERDS(0.993)DDERPSFGGK;EEAT(0.008)Y(0.012)GVWAERDS(0.98)DDERPSFGGK;EEAT(0.001)Y(0.002)GVWAERDS(0.996)DDERPSFGGK 84.159 0.00012033 20854800 49299 73163 50202 60024 62823 59435 59803 54784 52169 58279 TRUE FALSE 53073.36934 69529.83181 51875.70962 55119.84719 60356.25336 61696.84057 51950.79426 61944.4569 56706.56532 56377.361 0.941395064 1.233293481 0.920151435 0.977694702 1.070576066 1.094354888 0.921483257 1.098747011 1.0058393 1 15.78282833 -7.998675041 0.004474938 4.32E-05 2.0487004 0.00516556 0.093364759 35384.372 160.7115759 36802.91404 36760.06231 1.00E-08 7.998675041 2.048657211 EECPRPMS(ph)ISPPDFSPK ddPTM_A459_MK2206_30min_R2 1 EECPRPMSISPPDFSPK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EECPRPMS(0.558)IS(0.424)PPDFS(0.018)PK 55.206 0.043645 7155700 29365 32425 24127 28197 29621 23808 34589 29057 23908 30401 TRUE FALSE 31613.20698 30814.82165 24931.38214 25893.2149 28457.93071 24714.03012 30047.42275 32854.84967 25987.47462 29409.01786 1.07494943 1.047801793 0.847746166 0.880451534 0.967660016 0.840355507 1.021707794 1.117169224 0.883656664 1 14.84397098 EECPRPMSISPPDFS(ph)PK ddPTM_A459_MK2206_30min_R1 4 EECPRPMSISPPDFSPK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EECPRPMSIS(0.006)PPDFS(0.994)PK;EECPRPMS(0.001)IS(0.004)PPDFS(0.995)PK;EECPRPMSISPPDFS(1)PK;EECPRPMSISPPDFS(1)PK 158.65 1.93E-05 83724600 8791.25 10283.4 11281.2 9037.9 6997.99 6184.76 8055.21 7293.43 11057.7 11250.5 TRUE FALSE 8043.508023 9613.948791 10515.46358 9734.000624 6719.24524 6534.935766 7517.861638 7229.66431 12207.18749 12644.29688 0.636137233 0.760338743 0.831636878 0.769833287 0.53140521 0.51682872 0.594565416 0.571772743 0.965430313 1 13.62619919 -8.273371748 22.98395873 0.982715514 0.65473877 0.633709824 0.100682244 211.3985527 407180.5798 0.108582616 0.029128408 5.33E-09 8.273371748 -0.327976744 EECPRPMSISPPDFS(ph)PK ddPTM_A459_MK2206_30min_R2 4 EECPRPMSISPPDFSPK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EECPRPMSISPPDFS(1)PK;EECPRPMSISPPDFS(1)PK;EECPRPMSISPPDFS(1)PK;EECPRPMSISPPDFS(1)PK 138.05 0.00028043 74023000 182651 186727 189980 167676 174079 171370 216122 168174 159712 208808 TRUE FALSE 196634.901 177454.4087 196313.8384 153976.3344 167243.7838 177891.6054 187744.9218 190154.9192 173603.4611 201994.6121 0.973466069 0.878510604 0.971876608 0.762279414 0.827961608 0.880675002 0.929455097 0.941386096 0.859445999 1 17.62395729 -7.252729298 8.534615535 0.927720585 0.878371053 0.117313001 0.066245751 0.383057602 270.559471 0.026911594 0.019885999 5.59E-08 7.252729298 -0.049349533 EEDEENDNDNES(ph)DHDEADS ddPTM_A459_MK2206_30min_R1 1 EEDEENDNDNESDHDEADS 19 0 H0YBP8;Q9NRG0 H0YBP8 CHRAC1 Chromatin accessibility complex protein 1 1 EEDEENDNDNES(1)DHDEADS 164.93 1.32E-07 1615500 0 133.5 186.11 134.75 164.24 183.2 310.75 203.67 180.96 161.83 TRUE FALSE 0 124.8091257 173.4773717 145.1284683 157.697973 193.5726257 290.0204345 201.8893347 199.7714396 181.8787222 0 0.686221699 0.953807953 0.797940884 0.867050148 1.064295061 1.594581439 1.110021735 1.098377189 1 7.506832963 -5.131505658 0.777675807 1.164008093 3.21E-25 0.692315161 0.212674748 1.155945556 0.747574285 0.094221339 1.070105711 7.39E-06 5.131505658 -1.164008093 EEDEEPES(ph)PPEK ddPTM_A459_MK2206_30min_R1 3 EEDEEPESPPEK 12 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EEDEEPES(1)PPEK;EEDEEPES(1)PPEK;EEDEEPES(1)PPEK 192.4 0.00014892 48046000 8413.5 8826.15 8279.44 6725.21 6187.71 5468.91 8414.27 6857.66 10635.4 14763.2 TRUE FALSE 7697.887644 8251.566031 7717.454681 7243.186839 5941.240408 5778.554958 7852.969401 6797.704202 11740.98789 16592.17667 0.463946822 0.497316669 0.465126115 0.436542292 0.358074804 0.348269855 0.473293502 0.409693335 0.707621919 1 14.01821554 -8.522585973 2.499946775 0.998946647 0.430042743 0.934637134 0.047770698 0.068918349 1.01924079 0.051009828 0.013860012 3.00E-09 8.522585973 -0.568903903 down EEDEEPES(ph)PPEK ddPTM_A459_MK2206_30min_R2 3 EEDEEPESPPEK 12 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EEDEEPES(1)PPEK;EEDEEPES(1)PPEK;EEDEEPES(1)PPEK 206.46 1.06E-27 170819000 277120 169553 204540 190796 141813 128712 217491 166708 122451 234601 TRUE FALSE 298336.5203 161133.2446 211359.2615 175207.3565 136244.7091 133610.2254 188934.1704 188497.308 133101.5666 226945.9886 1.314570582 0.710007018 0.931319663 0.772022266 0.600339799 0.588731381 0.832507204 0.830582242 0.586490061 1 17.79198946 -2.991671913 1.660808673 0.746569087 199.9846798 0.570972096 0.140514659 346.6599709 3.540170138 0.038042355 260981.3014 0.001019361 2.991671913 199.2381107 EEDEEPES(ph)PPEKK ddPTM_A459_MK2206_30min_R1 7 EEDEEPESPPEKK 13 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK 204.17 7.81E-05 962569900 32061.6 38994.3 36150.2 27161.3 21711 20239.2 31504.3 28689.1 43832.9 54386.5 TRUE FALSE 29334.59256 36455.76398 33696.42514 29253.26803 20846.2049 21385.12601 29402.70563 28438.27422 48389.48681 61124.31022 0.47991695 0.596420047 0.55127698 0.478586473 0.341046056 0.34986286 0.481031287 0.46525309 0.79165698 1 15.89945866 -8.433289508 2.639213829 0.997317099 0.465586927 0.84984426 0.074395692 0.104165729 1.49340872 0.0824271 0.022427839 3.69E-09 8.433289508 -0.531730172 down EEDEEPES(ph)PPEKK ddPTM_A459_MK2206_30min_R2 6 EEDEEPESPPEKK 13 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK 181.75 0.00020808 2624693000 987458 668672 833608 640192 553425 425301 816898 691131 408824 932901 TRUE FALSE 1063058.544 635466.7208 861400.0747 587886.2657 531694.7538 441486.1276 709638.3113 781464.1947 444382.7725 902460.5168 1.177955738 0.704149056 0.954501675 0.651426023 0.589161236 0.489202707 0.786337239 0.865926188 0.492412426 1 19.78350429 -2.049775128 1.066672358 0.698357294 199.9790657 0.370953547 0.171913461 744.7930868 2.632764282 0.052382005 360879.4868 0.008917125 2.049775128 199.2807084 EEDEHPY(ph)ELLLTAETK ddPTM_A459_MK2206_30min_R1 2 EEDEHPYELLLTAETK 16 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 EEDEHPY(1)ELLLTAETK;EEDEHPY(1)ELLLTAETK 192.32 5.61E-06 10379600 7680.3 9707.5 7334.2 7281.9 6296.8 6646.4 6363.9 6185.7 5043.1 5618.8 TRUE FALSE 7027.050154 9075.539986 6836.374938 7842.7532 6045.985122 7022.713424 5939.375843 6131.619077 5567.348292 6314.899364 1.112773102 1.437163043 1.082578604 1.241944289 0.95741591 1.112086356 0.940533728 0.970976531 0.881621063 1 12.62454403 -6.271630588 0.853356147 0.94668543 1.26855417 0.53675994 0.10710244 0.452560767 0.708766046 0.052341579 0.086008575 5.35E-07 6.271630588 0.32186874 EEDEPEERS(ph)GDETPGSEVPGDK ddPTM_A459_MK2206_30min_R1 4 EEDEPEERSGDETPGSEVPGDK 22 1 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 EEDEPEERS(0.849)GDET(0.15)PGS(0.002)EVPGDK;EEDEPEERS(0.937)GDET(0.058)PGS(0.005)EVPGDK;EEDEPEERS(0.996)GDET(0.002)PGS(0.002)EVPGDK;EEDEPEERS(0.98)GDET(0.005)PGS(0.015)EVPGDK 110.27 2.68E-05 162942600 23045.2 24087.5 24318 19393.6 19981.4 19274.1 22514.1 21747.3 22124.3 18168.4 TRUE FALSE 21085.08472 22519.39937 22667.36191 20887.29843 19185.49853 20365.38289 21012.22547 21557.16565 24424.20016 20419.23856 1.032608766 1.102852063 1.110098295 1.022922494 0.939579528 0.997362503 1.029040599 1.055728184 1.196136677 1 14.31764145 -11.40862528 9.798087249 0.996165434 1.050487382 0.053829914 0.066482284 0.006371205 7.43E-05 0.073645558 0.016722631 3.90E-12 11.40862528 0.054321948 EEDEPEERS(ph)GDETPGSEVPGDK ddPTM_A459_MK2206_30min_R2 3 EEDEPEERSGDETPGSEVPGDK 22 1 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 EEDEPEERS(0.969)GDET(0.012)PGS(0.019)EVPGDK;EEDEPEERS(0.994)GDET(0.005)PGS(0.001)EVPGDK;EEDEPEERS(0.947)GDET(0.029)PGS(0.024)EVPGDK 80.477 0.0006435 431149000 197399 232597 226807 215015 221470 155511 226486 173286 179133 196821 TRUE FALSE 212512.0192 221046.5712 234368.6322 197447.5867 212773.975 161429.0801 196748.1161 195935.0752 194713.6645 190398.7469 1.116141901 1.160966523 1.230935791 1.037021461 1.117517728 0.847847387 1.033347747 1.029077546 1.022662532 1 17.53866446 -6.15437752 1.869477619 0.996568908 1.163837343 0.508549991 0.069423293 0.277348228 1.91374091 0.023300414 0.033268339 7.01E-07 6.15437752 0.167268435 EEDEPEERSGDET(ph)PGSEVPGDK ddPTM_A459_MK2206_30min_R2 1 EEDEPEERSGDETPGSEVPGDK 22 1 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 EEDEPEERS(0.112)GDET(0.629)PGS(0.259)EVPGDK 85.166 0.00088372 378000000 58050 72293 70339 69699 66512 53688 81078 55348 54300 62379 TRUE FALSE 62494.35263 68703.03474 72684.06715 64004.36874 63900.40468 55731.13446 70432.36121 62582.17364 59022.91585 60343.57834 1.03564214 1.138531003 1.204503763 1.060665783 1.058942914 0.923563633 1.167189006 1.03709749 0.978114283 1 15.88091263 -5.982926981 23.42677935 1.033735478 1.128311027 0.280743504 0.070230692 156.3090783 214475.7799 0.019887112 0.029486805 1.04E-06 5.982926981 0.094575549 EEDGADAS(ph)EEDLTR ddPTM_A459_MK2206_30min_R1 2 EEDGADASEEDLTR 14 0 Q86X53;E5RHA3 Q86X53 ERICH1 Glutamate-rich protein 1 1 EEDGADAS(1)EEDLTR;EEDGADAS(1)EEDLTR 228.76 3.26E-13 59566000 7530.4 7248.1 7388.8 6222.2 7539.3 6434.7 7110.1 6772.6 6090 5726.1 TRUE FALSE 6889.899936 6776.247373 6887.268842 6701.434922 7238.993716 6799.027153 6635.798202 6713.387872 6723.077293 6435.492498 1.070609582 1.052949308 1.070200741 1.041324331 1.124854659 1.056489019 1.031125155 1.043181679 1.044687302 1 12.65183484 -8.398042144 0.638185096 1.001778429 1.068918452 0.441768742 0.022867661 0.759104432 0.72760004 0.023729698 0.010272287 4.00E-09 8.398042144 0.067140023 EEDGADAS(ph)EEDLTR ddPTM_A459_MK2206_30min_R2 2 EEDGADASEEDLTR 14 0 Q86X53;E5RHA3 Q86X53 ERICH1 Glutamate-rich protein 1 1 EEDGADAS(1)EEDLTR;EEDGADAS(1)EEDLTR 219.95 8.40E-09 101701000 41742 50799 47657 52045 53064 51075 56712 36678 40097 42591 TRUE FALSE 44937.79961 48276.39553 49245.86059 47792.75702 50980.44073 53018.69491 49265.64628 41471.94053 43584.56458 41201.25916 1.090689958 1.171721363 1.195251349 1.159982923 1.237351522 1.286822199 1.195731569 1.006569736 1.057845451 1 15.33040081 -7.758040332 24.96625162 1.024155669 1.194760865 0.707812109 0.04988916 48.77768993 358284.9548 0.026524068 0.014510116 1.75E-08 7.758040332 0.170605196 EEDGSLS(ph)LDGADSTGVVAK ddPTM_A459_MK2206_30min_R1 2 EEDGSLSLDGADSTGVVAK 19 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 EEDGS(0.21)LS(0.79)LDGADSTGVVAK;EEDGS(0.015)LS(0.985)LDGADSTGVVAK 259.14 3.95E-95 8835300 3590.21 3772.69 4467.4 3130.36 3244.89 3109.1 4798.6 3766.95 4886.4 6222.3 TRUE FALSE 3284.843787 3527.087195 4164.165335 3371.46087 3115.63916 3285.134555 4478.49415 3734.015953 5394.358766 6993.1655 0.469722015 0.504362037 0.595462146 0.482107977 0.445526301 0.469763593 0.640410148 0.533952178 0.771375819 1 12.77172993 -8.545352753 1.085903556 1.002616544 0.503165412 0.885204926 0.056233389 0.176570895 0.455518299 0.054522344 0.017579974 2.85E-09 8.545352753 -0.499451132 EEDGSLS(ph)LDGADSTGVVAK ddPTM_A459_MK2206_30min_R2 2 EEDGSLSLDGADSTGVVAK 19 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 EEDGS(0.001)LS(0.999)LDGADSTGVVAK;EEDGS(0.007)LS(0.993)LDGADSTGVVAK 300.29 3.07E-100 13631400 62920 46541 56556 49669 41189 35815 54647 44083 32001 47290 TRUE FALSE 67737.20358 44229.84162 58441.54881 45610.88382 39571.7129 37177.96492 47471.78326 49844.79946 34784.38914 45746.93117 1.480693936 0.966837348 1.277496595 0.997026088 0.865013497 0.812687627 1.037704214 1.0895769 0.760365521 1 15.48138735 -1.522878746 0.65912589 0.940552078 46.36094826 0.535388358 0.139873758 190.3966538 1.186818594 0.058224492 12644.2383 0.03 1.522878746 45.42039618 EEEEDGQEGS(ph)IHNLPLVTSQRPFYDGPMPTPR ddPTM_A459_MK2206_30min_R1 1 EEEEDGQEGSIHNLPLVTSQRPFYDGPMPTPR 32 1 O75717;O75717-2;H3BSQ1 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 EEEEDGQEGS(0.996)IHNLPLVT(0.002)S(0.001)QRPFY(0.001)DGPMPTPR 69.292 6.52E-05 10121000 900.77 724.77 988.91 470.85 627.17 571.49 1089.8 847.03 1014.6 1297.6 TRUE FALSE 824.1547814 677.5873413 921.7855445 507.1149486 602.1884908 603.8472699 1017.10143 839.624506 1120.071301 1458.356484 0.565125736 0.464623944 0.632071482 0.347730445 0.412922696 0.414060126 0.697429909 0.575733379 0.768036699 1 10.5101277 -8.419992757 0.869545666 0.997337358 0.477994954 0.748686212 0.093868038 0.300576111 0.505235837 0.092101691 0.033098438 3.80E-09 8.419992757 -0.519342404 EEEEEEEEDQEGDRETTIR ddPTM_A459_MK2206_30min_R1 1 EEEEEEEEDQEGDRETTIR 19 1 A0A0B4J2E5;Q15269 A0A0B4J2E5 PWP2 Periodic tryptophan protein 2 homolog 0 71.402 0.040666 5418400 699.13 647.69 844.62 571.19 624.25 707.16 778.95 713.47 653.55 655.29 FALSE TRUE 639.6653222 605.5252633 787.2895476 615.1831528 599.3848006 747.1987881 726.9876668 707.232207 721.4888613 736.4722724 0.868553164 0.82219696 1.069000935 0.835310677 0.81385929 1.014564724 0.987121571 0.960297127 0.979655159 1 9.5244874 -6.777799464 24.98489551 0.985770914 0.886292857 0.373528795 0.068826405 298.5857147 455993.0731 0.024980056 0.022094315 1.67E-07 6.777799464 -0.099478057 EEEEEEEEDQEGDRETTIR ddPTM_A459_MK2206_30min_R2 2 EEEEEEEEDQEGDRETTIR 19 1 A0A0B4J2E5;Q15269 A0A0B4J2E5 PWP2 Periodic tryptophan protein 2 homolog 0 ; 161.48 3.89E-06 12395000 27634 29726 32081 25576 28720 19804.5 31015 22834 23785.7 33216 FALSE TRUE 29749.68029 28249.85007 33150.56453 23486.35899 27592.30849 20558.17413 26942.69324 25818.4822 25854.53719 32132.16464 0.925853599 0.879176687 1.031694095 0.730929872 0.858713031 0.639800473 0.838496054 0.80350896 0.804631044 1 14.97173055 -5.767697567 24.9999804 0.798698202 0.938934986 0.295754279 0.09378375 164.3617316 656589.164 0.024799672 0.037833777 1.71E-06 5.767697567 0.140236784 EEEEGISQES(ph)SEEEQ ddPTM_A459_MK2206_30min_R1 1 EEEEGISQESSEEEQ 15 0 P17096;P17096-2 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 EEEEGISQES(0.795)S(0.205)EEEQ 178.22 1.97E-05 2406100 2352.4 1999 2088.3 1353.5 1899.8 2279.8 2427.7 1867.9 2023.1 2021.2 TRUE FALSE 2152.316027 1868.864737 1946.552014 1457.746805 1824.126943 2408.880306 2265.752563 1851.569147 2233.408485 2271.601515 0.947488374 0.822707999 0.856907341 0.641726462 0.803013614 1.060432602 0.997425185 0.815094168 0.983186738 1 11.14949406 -6.736363511 24.83500532 0.96130846 0.807603985 0.419137639 0.091786361 228.3826918 226188.3716 0.031829934 0.031816862 1.84E-07 6.736363511 -0.153704475 EEEEGISQES(ph)SEEEQ ddPTM_A459_MK2206_30min_R2 2 EEEEGISQESSEEEQ 15 0 P17096;P17096-2 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 EEEEGISQES(0.807)S(0.193)EEEQ;EEEEGIS(0.001)QES(0.499)S(0.499)EEEQ 162.72 0.00010936 9329500 38343.4 38040 35726 41520 36673 36691 41098 33992 34898.1 41223 TRUE FALSE 41279.00019 36150.98892 36917.08701 38127.68318 35233.03375 38087.30172 35701.78323 38434.87111 37933.47366 39877.89689 1.035134834 0.906542013 0.925753109 0.956110682 0.883522866 0.955098054 0.895277485 0.963813895 0.951240577 1 15.28330171 -8.675403768 1.415513658 0.999356714 0.93547582 0.159479048 0.040813784 1.069256078 4.332081675 0.036951369 0.010934984 2.11E-09 8.675403768 -0.063880894 EEEEKESDSDS(ph)EGPIQYR ddPTM_A459_MK2206_30min_R2 1 EEEEKESDSDSEGPIQYR 18 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 EEEEKES(0.001)DS(0.321)DS(0.679)EGPIQYR 62.792 0.022318 7099100 28921 18324 25941 19571 14931 12681 21395 17279 11652 31370 TRUE FALSE 31135.214 17414.05681 26805.85999 17971.9867 14344.73392 13163.58434 18585.8108 19537.42463 12665.4699 30346.39947 1.025993678 0.573842601 0.883329175 0.592227975 0.4726997 0.433777469 0.612455221 0.643813598 0.417363184 1 14.88923773 -1.522878745 0.833255791 0.584889951 126.6385461 0.276762869 0.182157326 753.4087677 2.260057108 0.060968959 179794.1011 0.03 1.522878745 126.0536562 EEEEQQEGGFAS(ph)PR ddPTM_A459_MK2206_30min_R2 2 EEEEQQEGGFASPR 14 0 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2;A0A087WWG9 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 EEEEQQEGGFAS(1)PR;EEEEQQEGGFAS(1)PR 197.73 1.49E-21 1874600 7733.5 8111.5 8126 6933.4 9113.3 7938.2 10027.7 8125.1 7347.7 10913 TRUE FALSE 8325.582706 7708.694705 8396.916784 6366.919041 8755.466051 8240.293764 8711.050945 9187.078468 7986.789664 10556.9097 0.788638242 0.730203717 0.79539534 0.603104433 0.829358808 0.780559273 0.825151601 0.870243161 0.756546176 1 13.36589996 -10.59507846 0.223469738 1.169351957 0.720126249 0.538692244 0.065302266 13.60764143 0.671288728 1.546943104 0.144976193 2.54E-11 10.59507846 -0.449225709 EEEESSSNGTASQS(ph)TSPSQPR ddPTM_A459_MK2206_30min_R2 1 EEEESSSNGTASQSTSPSQPR 21 0 Q92793-2;Q92793;I3L466 Q92793-2 CREBBP CREB-binding protein 1 EEEESSSNGTAS(0.006)QS(0.579)T(0.017)S(0.399)PSQPR 169.51 2.47E-09 0 4162.7 3900.5 3715.9 3148.5 3187.5 3161 3815.4 3376.6 4067.9 5171.8 TRUE FALSE 4481.399513 3706.806842 3839.786251 2891.257478 3062.342734 3281.29407 3314.433397 3817.933214 4421.718589 5003.04459 0.895734474 0.740910215 0.767489912 0.577899602 0.612095831 0.655859449 0.662483281 0.763121964 0.883805553 1 12.2885906 -8.36067205 1.917527347 0.995800373 0.696065984 0.569929099 0.084749811 0.245203516 1.798739592 0.086707834 0.024917789 4.36E-09 8.36067205 -0.29973439 EEEESSSNGTASQST(ph)SPSQPR ddPTM_A459_MK2206_30min_R1 1 EEEESSSNGTASQSTSPSQPR 21 0 Q92793-2;Q92793;I3L466 Q92793-2 CREBBP CREB-binding protein 1 EEEESSS(0.001)NGTAS(0.009)QS(0.19)T(0.611)S(0.19)PSQPR 171.3 8.70E-10 0 61.242 131.77 162.7 88.172 0 138.7 205.63 269.57 151.3 308.14 TRUE FALSE 56.03304631 123.191749 151.6563773 94.96302272 0 146.5530741 191.9127979 267.2131779 167.0281764 346.3147095 0.161798055 0.355721965 0.437914917 0.274210191 0 0.423178889 0.554157223 0.77159061 0.482301709 1 8.435939856 -7.311197611 2.240248906 0.716341251 0.263666939 0.634747919 0.164833906 0.221450989 2.173647174 0.08256974 0.051739244 4.88E-08 7.311197611 -0.452674312 EEEGVS(ph)ESEDGGGSSVDSLAAHVK ddPTM_A459_MK2206_30min_R1 1 EEEGVSESEDGGGSSVDSLAAHVK 24 0 A0A087WV20;A0A087WTU9;Q8TCU4-3;Q8TCU4-2;Q8TCU4;A0A494BZW1;H7C1D9 A0A087WV20 ALMS1 Alstrom syndrome protein 1 1 EEEGVS(0.776)ES(0.224)EDGGGSSVDSLAAHVK 201.76 4.16E-31 5416400 1306.5 1012.7 1172.3 625.87 1112.8 976.48 1271.5 1010.9 1124.5 1163.3 TRUE FALSE 1195.375314 946.7730459 1092.727542 674.0746158 1068.47482 1031.767454 1186.680555 1002.061808 1241.395799 1307.418386 0.914302053 0.724154606 0.835790252 0.515576821 0.817240166 0.789163947 0.907651726 0.766443105 0.949501561 1 10.35250518 -8.195313348 0.727537656 1.000163883 0.755963655 0.339985536 0.106436308 0.746852992 0.864029309 0.101766293 0.042462204 6.38E-09 8.195313348 -0.244200228 EEEMGEEEEVER ddPTM_A459_MK2206_30min_R1 1 EEEMGEEEEVER 12 0 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;F5GWX5;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YDJ9;A0A2R8Y5Z7;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 0 156.51 0.0081323 0 591.33 481.04 596.89 523.45 432.35 409.06 748.23 803.86 533.11 527.33 FALSE TRUE 541.0342783 449.7242086 556.3747698 563.7662097 415.128584 432.2206237 698.3169419 796.8319368 588.5286923 592.6596215 0.912892086 0.75882377 0.938776238 0.951247882 0.700450257 0.729289812 1.178276563 1.344501815 0.993029845 1 9.211059958 -7.270558882 24.89091716 1.157660566 0.832897194 0.577229233 0.12356165 429.4024407 1172012.995 0.051633648 0.035366122 5.36E-08 7.270558882 -0.324763372 EEEMQPAEEGPS(ph)VPK ddPTM_A459_MK2206_30min_R1 1 EEEMQPAEEGPSVPK 15 0 Q6ZU67-5;Q6ZU67-4;Q6ZU67-2;Q6ZU67 Q6ZU67-5 BEND4 BEN domain-containing protein 4 1 EEEMQPAEEGPS(1)VPK 98.942 0.0085555 49153000 1605.1 1792 1659 1647.7 1878.5 1501.4 1755.8 1685 1533.3 1574.6 TRUE FALSE 1468.577816 1675.340474 1546.391702 1774.606139 1803.675367 1586.407971 1638.673786 1670.268223 1692.692022 1769.673336 0.829858136 0.94669476 0.873828899 1.002787409 1.019213733 0.896441133 0.925975293 0.943828552 0.956499704 1 10.78926736 -3.729163255 1.067268402 0.954067864 5.77E-09 0.412620664 0.043859853 15.04915903 2.490809972 0.013971114 27.39206767 0.000186568 3.729163255 -0.954067858 EEENS(ph)EEELAAATTSK ddPTM_A459_MK2206_30min_R1 1 EEENSEEELAAATTSK 16 0 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 EEENS(1)EEELAAATTSK 149.42 0.00025968 3293700 994.25 1221.9 1947.5 1188.5 2494.2 2103.3 1862.5 1780.5 2977.3 1710.4 TRUE FALSE 909.6838165 1142.354088 1815.309126 1280.038476 2394.850732 2222.387028 1738.256023 1764.933276 3286.800989 1922.297265 0.473227442 0.594265054 0.944343603 0.665889974 1.245827467 1.156109967 0.904259739 0.918137537 1.709829718 1 10.90861574 -4.884074724 0.493797956 1.183232839 2.45E-18 0.496335819 0.240281323 3.691778853 0.747008066 0.157742161 2.520973868 1.31E-05 4.884074724 -1.183232839 EEENS(ph)EEELAAATTSK ddPTM_A459_MK2206_30min_R2 4 EEENSEEELAAATTSK 16 0 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 EEENS(0.963)EEELAAAT(0.03)T(0.005)S(0.001)K;EEENS(1)EEELAAATTSK;EEENS(1)EEELAAATTSK;EEENS(1)EEELAAATTSK 240.68 1.72E-21 17079200 79492 59847.9 74068.7 66022 57162.5 50194.6 66548.6 58255.3 45080.1 73551.5 TRUE FALSE 85577.96864 56875.94031 76538.11349 60627.79141 54918.01303 52104.79068 57810.68888 65869.46773 49001.08561 71151.52058 1.202756708 0.799363666 1.075705942 0.852094107 0.771845951 0.732307479 0.812501102 0.925763317 0.688686415 1 16.11860697 -5.888113497 5.770178907 0.813190302 1.002158981 0.341760268 0.125831198 0.238136016 11.15465072 0.033591362 0.050495808 1.29E-06 5.888113497 0.188968679 EEEPTGWEEPS(ph)PESIR ddPTM_A459_MK2206_30min_R2 2 EEEPTGWEEPSPESIR 16 0 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7;H7C269 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 EEEPTGWEEPS(1)PESIR;EEEPTGWEEPS(0.994)PES(0.006)IR 160.93 5.05E-05 14458500 28107 19216.2 24103 22353.4 18925.7 17638.3 26046 21775 19372.7 27131 TRUE FALSE 30258.89353 18261.95145 24906.58199 20527.05572 18182.58192 18309.53787 22626.12891 24621.06726 21057.70243 26245.71769 1.152907834 0.695806899 0.948976983 0.782110665 0.692782805 0.697620011 0.862088405 0.938098457 0.802329076 1 14.67979443 -10.42125313 13.81970795 0.999981951 0.833401412 0.105022196 0.137100381 0 0 0.129385717 0.031380646 3.79E-11 10.42125313 -0.166580539 EEEPTGWEEPS(ph)PESIRR ddPTM_A459_MK2206_30min_R1 2 EEEPTGWEEPSPESIRR 17 1 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7;H7C269 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 EEEPTGWEEPS(0.899)PES(0.101)IRR;EEEPTGWEEPS(0.989)PES(0.011)IRR 115.91 0.00084336 10170900 2684.5 2953.5 2736 2044.47 2674.4 2916.9 3076.5 2729.2 2926.3 3533.1 TRUE FALSE 2456.169178 2761.226613 2550.287943 2201.935434 2567.872985 3082.052357 2871.272298 2705.338892 3230.499357 3970.807102 0.61855666 0.695381705 0.642259339 0.55453095 0.64668792 0.776177809 0.723095387 0.681307055 0.8135624 1 11.95521656 -9.092581203 0.372921019 1.046319305 0.623871029 0.810631169 0.051723753 1.271732045 0.329146722 0.159120131 0.047520463 8.08E-10 9.092581203 -0.422448277 EEEPTGWEEPS(ph)PESIRR ddPTM_A459_MK2206_30min_R2 4 EEEPTGWEEPSPESIRR 17 1 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7;H7C269 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 EEEPT(0.003)GWEEPS(0.994)PES(0.003)IRR;EEEPTGWEEPS(0.993)PES(0.007)IRR;EEEPTGWEEPS(1)PESIRR;EEEPT(0.001)GWEEPS(0.986)PES(0.013)IRR 111.09 0.001059 20356400 85806.5 83718.6 93132 88101.5 86712.9 93727.8 95953.4 76314.7 74558.2 84615.9 TRUE FALSE 92375.91161 79561.25606 96236.9744 80903.32563 83308.11585 97294.67711 83354.60332 86289.29332 81043.13747 81854.89011 1.128532596 0.971979267 1.1757022 0.988374983 1.017753683 1.18862388 1.018321608 1.054173956 0.990083028 1 16.32078099 -8.040309434 1.856191632 0.995037078 1.070433331 0.148109291 0.070960331 0.728032838 4.502385898 0.059683834 0.019380496 9.11E-09 8.040309434 0.075396253 EEEQEDLTKDMDEPS(ph)PVPNVEEVTLPK ddPTM_A459_MK2206_30min_R1 1 EEEQEDLTKDMDEPSPVPNVEEVTLPK 27 1 Q8TAQ2;F8VXC8;Q8TAQ2-2;Q8TAQ2-3 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 1 EEEQEDLTKDMDEPS(1)PVPNVEEVTLPK 89.079 0.0013814 0 814.08 673.48 651.24 660.1 465.01 632.1 442.79 688.66 594.35 439.11 TRUE FALSE 744.8382211 629.6363296 607.0356433 710.9410164 446.487667 667.8889557 413.252287 682.6391182 656.1348094 493.5102619 1.509265923 1.275832294 1.230036516 1.440580007 0.904718101 1.353343603 0.83737324 1.383231861 1.329526172 1 8.946936274 -1.522878745 0.591319951 1.165196793 20.62674765 0.217702116 0.19493959 266.0957199 2.1250278 0.086796928 6673.215387 0.03 1.522878745 19.46155086 EEETS(ph)IDVAGKPNEVTK ddPTM_A459_MK2206_30min_R2 1 EEETSIDVAGKPNEVTK 17 1 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 EEET(0.197)S(0.803)IDVAGKPNEVTK 99.313 0.0026607 14635000 79286 30872 41846 33569 26984 34424 89762 37743 61034 64979 TRUE FALSE 85356.19712 29338.94137 43241.12475 30826.30532 25924.47258 35734.02944 77976.14158 42676.13969 66342.627 62858.74055 1.357904985 0.466744022 0.6879095 0.490406029 0.412424308 0.568481473 1.240497994 0.678921329 1.055424057 1 15.93982575 -7.235728297 24.58173237 0.96695435 0.636777011 0.241943549 0.281901104 890.8462437 851717.096 0.10593795 0.082025628 5.81E-08 7.235728297 -0.330177339 EEEVERPVSS(ph)PGDPEQK ddPTM_A459_MK2206_30min_R2 1 EEEVERPVSSPGDPEQK 17 1 O43149 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 EEEVERPVS(0.171)S(0.829)PGDPEQK 63.614 0.026485 5258900 34013 31657 33134 34478 32995 31531 38002 31005 24323 36441 TRUE FALSE 36617.06143 30084.95941 34238.67102 31661.03711 31699.45051 32730.9343 33012.29175 35057.45996 26438.57057 35251.93315 1.03872492 0.853427223 0.971256551 0.898136195 0.899225877 0.928486224 0.936467558 0.994483332 0.749989241 1 15.10541475 -4.741575758 24.83809679 0.916327266 1.03872538 0.220467235 0.069948787 1995.241752 2494772.733 0.016068232 0.62351448 1.81E-05 4.741575758 0.122398115 EEEVS(ph)CSGPLSQK ddPTM_A459_MK2206_30min_R1 1 EEEVSCSGPLSQK 13 0 F5GY68;F5H0F9;Q9UJX4-2;Q9UJX4-3;Q9UJX4 F5GY68 ANAPC5 Anaphase-promoting complex subunit 5 1 EEEVS(0.9)CS(0.1)GPLSQK 157.5 7.80E-05 0 1116.2 1253.6 1363.8 1081.8 1125.4 1158.7 914.01 765.88 1049.9 956.6 TRUE FALSE 1021.261329 1171.990412 1271.229056 1165.120423 1080.572935 1224.304593 853.0380606 759.1839919 1159.040862 1075.11083 0.949912604 1.090111251 1.182416752 1.083721223 1.005080504 1.138770589 0.793441975 0.706144865 1.0780664 1 10.07026968 -7.258835068 24.91950744 0.86992538 1.07778948 0.369456884 0.113757435 211.2176637 2021060.653 0.044398729 0.032799826 5.51E-08 7.258835068 0.2078641 EEEWDPEYT(ph)PK ddPTM_A459_MK2206_30min_R1 3 EEEWDPEYTPK 11 0 Q9NYF8-2;Q9NYF8;Q9NYF8-4;H0YF14;Q9Y2W1;A0A3B3ITZ9 Q9NYF8-2;Q9Y2W1 BCLAF1;THRAP3 Bcl-2-associated transcription factor 1;Thyroid hormone receptor-associated protein 3 1 EEEWDPEYT(1)PK;EEEWDPEY(0.002)T(0.998)PK;EEEWDPEYT(1)PK 160.22 0.0013948 54461000 21500.6 23290.3 19965 15693.3 15928.2 15374.5 18573.6 15669.3 18549.1 21203.1 TRUE FALSE 19671.86107 21774.09724 18609.83143 16902.00069 15293.74607 16244.9909 17334.58903 15532.30496 20477.34532 23829.9001 0.825511688 0.91373011 0.780944584 0.709277026 0.64178809 0.681706211 0.727430201 0.651798996 0.8593131 1 14.54048528 -5.470299386 4.478654488 0.730436039 0.868056429 0.136649121 0.104960609 0.301479502 12.67846059 0.026532058 0.055772752 3.39E-06 5.470299386 0.137620389 EEEWDPEYT(ph)PK ddPTM_A459_MK2206_30min_R2 2 EEEWDPEYTPK 11 0 Q9NYF8-2;Q9NYF8;Q9NYF8-4;H0YF14;Q9Y2W1;A0A3B3ITZ9 Q9NYF8-2;Q9Y2W1 BCLAF1;THRAP3 Bcl-2-associated transcription factor 1;Thyroid hormone receptor-associated protein 3 1 EEEWDPEYT(1)PK;EEEWDPEYT(1)PK 193.81 4.76E-05 30622000 117567 102950 104808 93921 84943 64540 103089 74919 64413 97481 TRUE FALSE 126568.0199 97837.6527 108302.2464 86247.35386 81607.71102 66996.11493 89553.29047 84711.17054 70015.52631 94300.20295 1.34218184 1.037512642 1.148483704 0.914604117 0.865403344 0.710455681 0.949661694 0.898313767 0.742474821 1 16.52497326 -5.054599258 0.808721788 0.848965202 1.439334176 0.666854232 0.102229064 1.082988642 0.712522544 0.040012263 0.533798603 8.82E-06 5.054599258 0.590368974 EEFLSAS(ph)PEPR ddPTM_A459_MK2206_30min_R2 1 EEFLSASPEPR 11 0 E5RJ05;Q9Y2G4-4;Q9Y2G4-1;Q9Y2G4-3;Q9Y2G4 E5RJ05 ANKRD6 Ankyrin repeat domain-containing protein 6 1 EEFLS(0.022)AS(0.978)PEPR 98.156 0.017649 0 5484.2 8608.9 6379.5 8902.8 6186.1 9645.2 7118.2 6212.3 8026.1 5335.3 TRUE FALSE 5904.074569 8181.394545 6592.189346 8175.412761 5943.202631 10012.25484 6183.57179 7024.26894 8724.19567 5161.209598 1.143932339 1.585169986 1.277256663 1.584010997 1.15151352 1.939904717 1.198085773 1.360973393 1.690339349 1 12.3334935 -10.58486305 4.620904113 0.999982375 1.437955155 0.217855913 0.24828238 162365935.6 0.166170638 35025.56808 0.055437716 2.60E-11 10.58486305 0.437972779 EEGAAPS(ph)PTHVAELATMEVESAR ddPTM_A459_MK2206_30min_R1 2 EEGAAPSPTHVAELATMEVESAR 23 0 Q9NRS6 Q9NRS6 SNX15 Sorting nexin-15 1 EEGAAPS(0.802)PT(0.198)HVAELATMEVESAR;EEGAAPS(0.982)PT(0.018)HVAELATMEVESAR 106.36 1.35E-05 20909000 3275 3089.64 3252.8 2506.95 3390.9 2942.88 4391.7 3194 3760.6 4648.7 TRUE FALSE 2996.444052 2888.503874 3032.008999 2700.035723 3255.833273 3109.503322 4098.737706 3166.075195 4151.527827 5224.616052 0.573524259 0.552864334 0.580331448 0.516791224 0.623171778 0.595163987 0.784505056 0.605991936 0.794609171 1 12.3511093 -8.839347635 0.352670779 1.051741948 0.53360831 0.84248498 0.056607803 0.806755032 0.228058941 0.133630834 0.053938801 1.45E-09 8.839347635 -0.518133638 EEGAAPS(ph)PTHVAELATMEVESAR ddPTM_A459_MK2206_30min_R2 1 EEGAAPSPTHVAELATMEVESAR 23 0 Q9NRS6 Q9NRS6 SNX15 Sorting nexin-15 1 EEGAAPS(0.964)PT(0.036)HVAELATMEVESAR 77.1 0.00052702 6567600 19940 15561 16438 15412 14187 20403 16836 17089 10719 19338 TRUE FALSE 21466.62173 14788.26337 16986.03472 14152.7903 13629.9471 21179.45046 14625.41298 19322.59098 11651.31924 18707.00264 1.147517972 0.790520194 0.90800408 0.756550398 0.728601335 1.132166968 0.781814877 1.032906839 0.622831967 1 14.1912908 -4.752437001 24.90898788 0.862507327 1.147518547 0.249868202 0.148668058 470.772055 1302495.115 0.034726195 0.412820768 1.77E-05 4.752437001 0.28501122 EEGAAPSPT(ph)HVAELATMEVESAR ddPTM_A459_MK2206_30min_R2 1 EEGAAPSPTHVAELATMEVESAR 23 0 Q9NRS6 Q9NRS6 SNX15 Sorting nexin-15 1 EEGAAPS(0.097)PT(0.903)HVAELATMEVESAR 77.1 0.0010801 6677300 33749 27442 24729 31476 22206 23565 28531 24010 22523 28246 TRUE FALSE 36332.84939 26079.27018 25553.45252 28904.31011 21334.08086 24461.78259 24784.84543 27148.18944 24482.00983 27324.33533 1.329688314 0.954433836 0.935190269 1.05782299 0.78077218 0.895237973 0.907061238 0.993553516 0.895978238 1 14.73789878 -4.760276394 4.978281007 0.93050094 1.356010775 0.735321973 0.071024074 0.089782668 5.801409323 0.01775019 0.134410418 1.74E-05 4.760276394 0.425509834 EEGGEGT(ph)PVKQDLSAPPGYTLTENVAR ddPTM_A459_MK2206_30min_R1 3 EEGGEGTPVKQDLSAPPGYTLTENVAR 27 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 EEGGEGT(0.988)PVKQDLS(0.012)APPGYTLTENVAR;EEGGEGT(0.999)PVKQDLS(0.001)APPGYTLTENVAR;EEGGEGT(0.617)PVKQDLS(0.377)APPGY(0.003)T(0.003)LT(0.001)ENVAR 103.35 4.67E-07 75510000 4787.7 4337.9 4364.11 3854 4014.4 3486.8 4216.46 4425.06 3376.28 3167.59 TRUE FALSE 4380.480974 4055.501922 4067.886372 4150.835748 3854.497947 3684.219603 3935.187647 4386.372167 3727.256388 3560.014963 1.230467012 1.139181145 1.142659909 1.165960197 1.082719592 1.034888797 1.105385142 1.232121834 1.046977731 1 11.79766759 -1.522880681 0.015483362 1.40E-07 2.47874052 0.397197677 0.058260799 6386.334678 7.661781299 487.002949 769.3428736 0.029999866 1.522880681 2.478740379 EEGGEGT(ph)PVKQDLSAPPGYTLTENVAR ddPTM_A459_MK2206_30min_R2 2 EEGGEGTPVKQDLSAPPGYTLTENVAR 27 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 EEGGEGT(0.999)PVKQDLS(0.001)APPGYTLTENVAR;EEGGEGT(0.951)PVKQDLS(0.049)APPGYTLTENVAR 99.943 1.83E-06 26508000 63721 54307 51025 57745 57196 42673 65192 41159 43932 53989 TRUE FALSE 68599.52875 51610.19335 52726.14803 53027.04878 54950.19765 44296.95092 56632.21209 46538.62262 47753.12595 52227.34335 1.313479192 0.988183393 1.009550642 1.015312007 1.052134651 0.848156312 1.08434028 0.891077731 0.914331898 1 15.6725177 EEGGEGTPVKQDLS(ph)APPGYTLTENVAR ddPTM_A459_MK2206_30min_R2 1 EEGGEGTPVKQDLSAPPGYTLTENVAR 27 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 EEGGEGT(0.453)PVKQDLS(0.535)APPGY(0.005)T(0.005)LT(0.002)ENVAR 79.455 6.04E-05 20303000 49421 28780 52615 52153 46257 49804 50554 30627 37981 53023 TRUE FALSE 53204.70976 27350.82705 54369.15784 47891.93307 44440.71776 51699.32612 43916.19907 34630.05406 41284.51873 51292.86385 1.037273136 0.533228699 1.059975087 0.93369583 0.866411318 1.007924343 0.856185359 0.675143703 0.80487841 1 15.6464705 -11.04434974 6.779118584 1.000079541 0.860491529 0.063933773 0.155801769 0.00018401 1.30E-05 0.148202911 0.035924059 9.03E-12 11.04434974 -0.139588012 EEGPPPPSPDGASS(ph)DAEPEPPSGR ddPTM_A459_MK2206_30min_R2 1 EEGPPPPSPDGASSDAEPEPPSGR 24 0 C9JR83;Q9NTJ3-2;Q9NTJ3;C9JWF0;C9IYK2;C9JJ64;E9PD53;F8WCB7 C9JR83 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 EEGPPPPSPDGAS(0.368)S(0.631)DAEPEPPS(0.001)GR 94.57 8.25E-06 20439000 20633 37476 30384 48620 46851 47955 46383 28559 42055 32594 TRUE FALSE 22212.67834 35614.99634 31396.9874 44647.59047 45011.39433 49779.96113 40292.85638 32291.75936 45712.86788 31530.46045 0.704483158 1.129542538 0.995766854 1.416014541 1.427552712 1.578789539 1.277902568 1.024144871 1.449800201 1 14.94445862 -4.626182568 1.050907387 1.314409688 0.288534045 0.454792391 0.19162803 2.190538185 1.594633302 0.062797279 2.722838075 2.36E-05 4.626182568 -1.025875642 EEGS(ph)DIEDEDMEELLNDTR ddPTM_A459_MK2206_30min_R1 2 EEGSDIEDEDMEELLNDTR 19 0 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 EEGS(1)DIEDEDMEELLNDTR;EEGS(1)DIEDEDMEELLNDTR 409.19 0 17812400 4166.6 4343.3 3922.5 3419 3888.8 3367.2 4243.7 4238 3619.6 3147.9 TRUE FALSE 3812.20879 4060.550381 3656.251629 3682.331972 3733.900861 3557.847954 3960.610516 4200.947613 3995.870373 3537.885617 1.077538734 1.147733652 1.033456709 1.040828441 1.05540463 1.005642448 1.11948518 1.18741759 1.129451544 1 11.78867169 -7.461788063 15.78635303 1.125748765 1.061844874 0.12840731 0.056303156 8.050393972 2079.37678 0.023523126 0.015856954 3.45E-08 7.461788063 -0.063903891 EEGS(ph)DIEDEDMEELLNDTR ddPTM_A459_MK2206_30min_R2 1 EEGSDIEDEDMEELLNDTR 19 0 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 EEGS(1)DIEDEDMEELLNDTR 219.89 3.17E-19 5642000 13770 17471 15086 16980 18767 16677 18624 16070 13107 18688 TRUE FALSE 14824.24179 16603.41555 15588.95971 15592.67968 18030.11328 17311.65492 16178.64643 18170.40418 14247.02317 18078.21209 0.820005967 0.918421327 0.862306495 0.862512266 0.997339405 0.957597733 0.894925137 1.005099624 0.788077001 1 14.14196438 -6.228857414 24.82583202 0.939336967 0.869318983 0.243188432 0.064414889 921.0243153 701774.5086 0.018038249 0.023285437 5.90E-07 6.228857414 -0.070017984 EEGS(ph)LSDTEADAVSGQLPDPTTNPSAGK ddPTM_A459_MK2206_30min_R1 1 EEGSLSDTEADAVSGQLPDPTTNPSAGK 28 0 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 EEGS(0.509)LS(0.454)DT(0.036)EADAVS(0.001)GQLPDPTTNPSAGK 68.543 0.00043414 21126000 1995.6 2015.8 2236.4 1557.3 1742.6 1659.9 2182.3 1774.2 2546.6 3460.4 TRUE FALSE 1825.863741 1884.571054 2084.599399 1677.243516 1673.188552 1753.882104 2036.722749 1758.688356 2811.328183 3889.100477 0.469482275 0.48457762 0.536010682 0.431267725 0.430225077 0.450973718 0.523700213 0.452209545 0.722873631 1 11.92522079 -8.532870007 2.432049585 0.999315798 0.47184773 0.95661183 0.035584774 0.054527455 0.764526611 0.035574575 0.009691035 2.93E-09 8.532870007 -0.527468068 down EEGSLS(ph)DTEADAVSGQLPDPTTNPSAGK ddPTM_A459_MK2206_30min_R1 1 EEGSLSDTEADAVSGQLPDPTTNPSAGK 28 0 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 EEGS(0.055)LS(0.931)DT(0.014)EADAVSGQLPDPTTNPSAGK 205.57 9.25E-42 15219000 2053.5 2230.4 2301.1 1812 1770.6 1778.9 2684.9 1820 2678.9 3738.2 TRUE FALSE 1878.839042 2085.200555 2144.907743 1951.560554 1700.073253 1879.619781 2505.79522 1804.087932 2957.381242 4201.316438 0.447202459 0.496320757 0.5105323 0.464511679 0.404652513 0.447388291 0.596430966 0.429410152 0.703917757 1 12.03662574 -8.561315363 2.683232721 0.999646048 0.476674559 0.909978039 0.051695027 0.078485847 1.388573426 0.050261399 0.013530589 2.75E-09 8.561315363 -0.522971489 down EEGSLS(ph)DTEADAVSGQLPDPTTNPSAGK ddPTM_A459_MK2206_30min_R2 2 EEGSLSDTEADAVSGQLPDPTTNPSAGK 28 0 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 EEGS(0.099)LS(0.867)DT(0.034)EADAVSGQLPDPTTNPSAGK;EEGS(0.198)LS(0.789)DT(0.013)EADAVSGQLPDPTTNPSAGK 190.66 8.61E-33 27216000 172090 120121 137935 138656 109527 91233 153728 107399 87701 158335 TRUE FALSE 185265.3427 114155.9658 142533.6841 127327.3613 105226.4197 94704.93575 133543.3289 121436.4181 95329.07445 153168.5419 1.209552173 0.745296419 0.930567611 0.831289243 0.686997593 0.618305395 0.871871778 0.792828714 0.622380244 1 17.2247605 -2.844826206 1.587550495 0.77596516 200 0.500261582 0.12279844 526.2352703 3.757090708 0.033327144 379627.0015 0.001429466 2.844826206 199.2240348 EEGSPLELER ddPTM_A459_MK2206_30min_R2 1 EEGSPLELER 10 0 F5GZS6;J3KPF3;P08195-2;P08195-3;P08195;P08195-4;F5GZI0 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 129.38 0.040968 3566200 28894 15846 17162 18415 16334 16334 28751 14866 17041 31817 FALSE TRUE 31106.14686 15059.11068 17734.17251 16910.43559 15692.64509 16955.60182 24975.95916 16809.03724 18523.19538 30778.8139 1.010635009 0.489268714 0.576181154 0.54941804 0.509852171 0.550885485 0.81146594 0.546123619 0.601816413 1 14.90965002 -11.20470574 6.193041064 1.004102065 0.616768669 0.344041074 0.153773677 0.008466265 0.000434961 0.144733532 0.034850318 6.24E-12 11.20470574 -0.387333395 EEHGGLIRS(ph)PR ddPTM_A459_MK2206_30min_R1 5 EEHGGLIRSPR 11 1 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR 133.88 0.008243 1880463000 28162.7 27180.8 27430 24065.6 29485.6 26460.6 28278.3 26051.9 21766.8 17802.7 TRUE FALSE 25767.31448 25411.32498 25568.12802 25919.13668 28311.12612 27958.77631 26391.9062 25824.13098 24029.53675 20008.23288 1.287835594 1.270043443 1.277880369 1.295423581 1.41497384 1.397363599 1.31905233 1.290675251 1.20098246 1 14.28830613 -8.628134283 1.585714539 1.00073253 1.32433131 0.822331084 0.045878264 0.236365355 1.26090293 0.050877961 0.014731695 2.35E-09 8.628134283 0.323598779 EEHGGLIRS(ph)PR ddPTM_A459_MK2206_30min_R2 3 EEHGGLIRSPR 11 1 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR 137.09 0.0064634 919181000 126178 176302 158457 167916 174553 173077 170715 134075 147587 134734 TRUE FALSE 135838.2847 167547.099 163739.8773 154196.7257 167699.1722 179663.5665 148299.9154 151599.0628 160423.8505 130337.6406 1.042203036 1.285485131 1.256274676 1.183055984 1.286651894 1.378447283 1.137813411 1.163125726 1.230832856 1 16.99189426 -10.34860314 5.725282115 0.999999958 1.223015415 0.352271437 0.088551935 4.79E-08 9.85E-09 0.085994059 0.020856619 4.48E-11 10.34860314 0.223015457 EEHLCTQR ddPTM_A459_MK2206_30min_R1 2 EEHLCTQR 8 0 J3KN67;P06753-7;P06753-2;A0A087WWU8;P06753-5 J3KN67;P06753-2 TPM3 Tropomyosin alpha-3 chain 0 ; 171.53 0.0002243 40778000 13883.9 13659 11917.2 11404.2 11378.1 10653.1 14668.1 12450.3 2464.4 11392.6 FALSE TRUE 12703.0014 12769.79662 11108.29367 12282.55346 10924.88618 11256.26932 13689.61781 12341.44834 2720.583199 12804.0013 0.992111849 0.997328594 0.867564241 0.959274618 0.853240009 0.879121226 1.069167168 0.963874343 0.212479141 1 13.64430711 EEHLCTQR ddPTM_A459_MK2206_30min_R2 4 EEHLCTQR 8 0 J3KN67;P06753-7;P06753-2;A0A087WWU8;P06753-5 J3KN67;P06753-2 TPM3 Tropomyosin alpha-3 chain 0 ;;; 141.52 0.0031935 82973000 225052 238888 218837 270316 234003 229487 270117 213344 208258 248845 FALSE TRUE 242282.1542 227025.1693 226132.9164 248230.3181 224814.8664 238220.2886 234650.3134 241228.7933 226371.9044 240725.208 1.006467732 0.943088475 0.939381954 1.031177084 0.933906624 0.989594279 0.974764194 1.002091951 0.940374738 1 17.8770277 -12.11818897 2.231607139 1.566164242 0.973427814 0.058404163 0.032008459 4161061.463 756769.7845 12094799.86 0.007583968 7.62E-13 12.11818897 -0.592736427 EEIFRES(ph)PIPIEIPPAAVPSYVPESR ddPTM_A459_MK2206_30min_R1 2 EEIFRESPIPIEIPPAAVPSYVPESR 26 1 Q5TC82-2;Q5TC82 Q5TC82-2 RC3H1 Roquin-1 1 EEIFRES(1)PIPIEIPPAAVPSYVPESR;EEIFRES(1)PIPIEIPPAAVPSYVPESR 94.807 2.45E-06 7788900 505.57 627.33 637.47 710.4 580.31 521.68 873.44 623.48 541.24 602.64 TRUE FALSE 462.5686166 586.490703 594.2003125 765.1151311 557.1950239 551.2170708 815.1744113 618.0289801 597.5038348 677.2995929 0.682960128 0.865925078 0.877307943 1.129655383 0.822671429 0.813845271 1.203565482 0.912489815 0.882185433 1 9.403650318 -4.707851037 1.494544784 0.959425539 0.542169009 0.329396059 0.119772549 1.663961205 3.046528771 0.034510055 1.089785272 1.96E-05 4.707851037 -0.41725653 EEIFRES(ph)PIPIEIPPAAVPSYVPESR ddPTM_A459_MK2206_30min_R2 2 EEIFRESPIPIEIPPAAVPSYVPESR 26 1 Q5TC82-2;Q5TC82 Q5TC82-2 RC3H1 Roquin-1 1 EEIFRES(1)PIPIEIPPAAVPSYVPESR;EEIFRES(1)PIPIEIPPAAVPSYVPESR 79.589 8.28E-05 3237100 8131 9962.6 6055.2 10384.1 8674 8612.2 12681.6 6407.6 8340.1 8594.9 TRUE FALSE 8753.515612 9467.871771 6257.077346 9535.685813 8333.415177 8939.943306 11016.49069 7245.095321 9065.506823 8314.449117 1.052807647 1.138725084 0.75255465 1.146881252 1.002281096 1.075229781 1.324981431 0.871386092 1.090331626 1 13.02140496 EEIQETQT(ph)PTHSR ddPTM_A459_MK2206_30min_R1 3 EEIQETQTPTHSR 13 0 H7BZL0;Q9BYG3 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 EEIQET(0.003)QT(0.997)PT(0.001)HSR;EEIQETQT(0.994)PT(0.006)HSR;EEIQET(0.01)QT(0.99)PTHSR 209.22 2.04E-05 34751700 6754.7 6863.2 5566.9 5087.6 6255.9 5528.4 6390.3 5611.2 4694.1 4489.2 TRUE FALSE 6180.177295 6416.404433 5189.034338 5479.447834 6006.714256 5841.41323 5964.014747 5562.14187 5182.068493 5045.355988 1.224923932 1.27174464 1.028477346 1.086037902 1.190543199 1.157780193 1.182080068 1.102428032 1.027096702 1 12.30074035 -1.522881443 0.019234879 1.74E-07 2.566013512 0.417598156 0.066817053 3814.840724 5.678128736 284.2887265 501.5834711 0.029999814 1.522881443 2.566013338 EEIQETQT(ph)PTHSR ddPTM_A459_MK2206_30min_R2 2 EEIQETQTPTHSR 13 0 H7BZL0;Q9BYG3 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 EEIQETQT(0.499)PT(0.499)HS(0.002)R;EEIQET(0.001)QT(0.991)PT(0.007)HS(0.001)R 183.28 0.0002808 31516000 58613 58392 44540 65175 59227 51448 54518 60464 50398 65701 TRUE FALSE 63100.45635 55492.33819 46024.94137 59849.99402 56901.45039 53405.88969 47359.72111 68366.8524 54781.52694 63557.18175 0.992813945 0.873108855 0.724150129 0.941671615 0.895279634 0.84028096 0.745151371 1.0756747 0.861925048 1 15.95576753 -7.765541856 24.99999666 0.97659987 0.858148493 0.271939852 0.090150068 146.6802629 893825.2585 0.046579028 0.023648884 1.72E-08 7.765541856 -0.118451378 EEIT(ph)HIK ddPTM_A459_MK2206_30min_R1 1 EEITHIK 7 0 A0A0A0MQZ3;A0A5F9ZH43;A4UGR9-2;A4UGR9-3;A4UGR9;A4UGR9-8 A0A0A0MQZ3 XIRP2 Xin actin-binding repeat-containing protein 2 1 EEIT(1)HIK 97.602 0.030362 3344900 4266.8 4246.7 4262.6 4019.4 4085.6 3539 4173.5 3640.9 4134.8 4449 TRUE FALSE 3903.886254 3970.239058 3973.266588 4328.974884 3922.861901 3739.375122 3895.09343 3609.067995 4564.627257 5000.175708 0.780749814 0.794019908 0.794625393 0.865764552 0.78454481 0.747848744 0.778991311 0.721788234 0.912893371 1 12.28776308 -8.482109113 4.489392697 0.999352653 0.786250689 0.806039335 0.035160548 0.076596133 3.614096859 0.036074501 0.009417778 3.30E-09 8.482109113 -0.213101964 EEIVT(ph)PK ddPTM_A459_MK2206_30min_R1 1 EEIVTPK 7 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 EEIVT(1)PK 116.37 0.028924 17084000 6932.6 8871 7751.9 5565.2 4294.2 4640.5 6895.3 5721.2 9330.8 10471 TRUE FALSE 6342.945965 8293.496288 7225.722626 5993.832668 4123.152921 4903.2411 6435.327118 5671.180152 10300.77005 11768.22653 0.538989112 0.704736288 0.61400268 0.509323359 0.35036315 0.416650809 0.546839161 0.4819061 0.875303515 1 13.5226093 -8.371594901 3.646743834 0.993136256 0.520563017 0.765139833 0.093403582 0.121586101 2.762431323 0.102139571 0.027230688 4.25E-09 8.371594901 -0.472573239 EEKDKDDQEWESPS(ph)PPKPTVFISGVIAR ddPTM_A459_MK2206_30min_R1 1 EEKDKDDQEWESPSPPKPTVFISGVIAR 28 3 P51397 P51397 DAP Death-associated protein 1 1 EEKDKDDQEWES(0.135)PS(0.85)PPKPT(0.01)VFIS(0.005)GVIAR 45.942 0.034271 7911600 1809.9 2332.8 2389.8 2258.3 1193.7 1126.2 1555 1574.1 1931.4 1790.3 TRUE FALSE 1655.958501 2180.934296 2227.587034 2432.234657 1146.152401 1189.964471 1451.268787 1560.33781 2132.175942 2012.09588 0.823001785 1.083911715 1.107097856 1.208806539 0.569631106 0.591405451 0.721272183 0.775478855 1.059679095 1 10.97448334 -6.256177881 24.99361536 0.762027828 1.06139023 0.366935075 0.171567643 461.402005 2191789.541 0.053137672 0.066523227 5.54E-07 6.256177881 0.299362403 EEKESEDKPEIEDVGS(ph)DEEEEK ddPTM_A459_MK2206_30min_R1 2 EEKESEDKPEIEDVGSDEEEEK 22 2 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK 97.441 0.0002069 16250000 1439.53 1824.98 1901.17 1195.35 936.56 1047.15 1024.76 1139.45 2272.6 2514.89 TRUE FALSE 1317.090414 1706.17347 1772.123877 1287.416064 899.254832 1106.438728 956.4001302 1129.487909 2508.844903 2826.45356 0.465986929 0.603644615 0.626977886 0.455488136 0.318156592 0.391458308 0.338374613 0.399613114 0.887629975 1 11.46477728 -8.339380612 4.327449998 0.984976208 0.450885133 0.807311871 0.096926306 0.106306162 3.523795759 0.107109871 0.028532144 4.58E-09 8.339380612 -0.534091075 down EEKESEDKPEIEDVGS(ph)DEEEEK ddPTM_A459_MK2206_30min_R2 3 EEKESEDKPEIEDVGSDEEEEK 22 2 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK 121.82 3.68E-05 31562600 141184 92422 131023 68220 70664 37842 111564 88335 53062.1 148196 TRUE FALSE 151993.1556 87832.45787 135391.2414 62646.20778 67889.3763 39282.10383 96915.51279 99880.6878 57677.34554 143360.3767 1.060217329 0.612668995 0.94441187 0.436984118 0.473557463 0.274009491 0.676027191 0.696710556 0.402324177 1 17.12928681 -5.760676577 24.99993191 0.541630979 0.846456382 0.290102077 0.216511544 25.05960618 821235.9266 0.057653029 0.092784777 1.74E-06 5.760676577 0.304825403 EEKS(ph)VEYEGDLK ddPTM_A459_MK2206_30min_R1 3 EEKSVEYEGDLK 12 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0;H7C3N7 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 EEKS(1)VEYEGDLK;EEKS(1)VEYEGDLK;EEKS(1)VEYEGDLK 172.09 0.0011344 25826000 11650.7 14047.2 13704.8 11813.3 9390.35 8092 9975.88 11321.1 11919.81 9819.16 TRUE FALSE 10659.74678 13132.72473 12774.55636 12723.16241 9016.312475 8550.162047 9310.407247 11222.12082 13158.9169 11035.63167 0.965938979 1.190029272 1.157573643 1.152916552 0.81701825 0.774777765 0.843667814 1.016898819 1.192402691 1 13.42988159 -6.245406443 24.54976503 0.928482019 1.124784178 0.317179198 0.125373206 793.9994817 1215777.755 0.040197354 0.051718441 5.68E-07 6.245406443 0.196302159 EEKS(ph)VEYEGDLK ddPTM_A459_MK2206_30min_R2 1 EEKSVEYEGDLK 12 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0;H7C3N7 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 EEKS(0.999)VEY(0.001)EGDLK 154.46 0.0020968 9189200 38216 34535 36458 30822 39754 20068 36936 32336 29455 31774 TRUE FALSE 41141.84634 32820.04212 37673.49152 28303.74401 38193.05821 20831.7018 32086.25883 36562.42623 32016.94266 30737.21698 1.338502649 1.06776232 1.225663714 0.920829756 1.242567219 0.677735457 1.043889525 1.189516482 1.041634403 1 14.90769893 -1.522878745 0.729589607 1.024279136 46.59902307 0.253319374 0.155220078 493.4264289 2.320679742 0.058614193 36855.7036 0.03 1.522878745 45.57474394 EELANERLMT(ph)LK ddPTM_A459_MK2206_30min_R1 1 EELANERLMTLK 12 1 B4E3Q4;Q9NZK5;C9IZA8;F5H7J3 B4E3Q4 CECR1 Adenosine deaminase CECR1 1 EELANERLMT(1)LK 81.185 0.021979 5236500 5569.4 3052.4 3296.1 5486.2 4002 5009.1 4060.1 4169 1902 2463.6 TRUE FALSE 5095.693284 2853.688205 3072.369915 5908.748075 3842.591866 5292.710913 3789.258137 4132.550873 2099.719706 2768.809367 1.840391521 1.030655356 1.10963577 2.134039326 1.387813806 1.911547604 1.368551473 1.492537161 0.758347516 1 11.43505001 -8.251344774 20.88173742 0.879173789 1.52559227 0.382019081 0.333194489 70.13210661 145083.9375 0.233752915 0.085150148 5.61E-09 8.251344774 0.646418481 EELDKYWSQQIEESTTVVTTQSAEVGAAETTLTELRR ddPTM_A459_MK2206_30min_R1 2 EELDKYWSQQIEESTTVVTTQSAEVGAAETTLTELRR 37 2 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 ; 134.07 1.50E-30 39935000 2445.09 2651.08 2713.15 2092.05 2279.81 2352.71 2921.69 2369.33 2583.08 2230.94 FALSE TRUE 2237.122256 2478.49421 2528.988937 2253.180053 2189.00034 2485.918407 2726.789391 2348.615198 2851.60041 2507.32569 0.892234409 0.988501103 1.008639981 0.898638762 0.873041882 0.991462105 1.087528996 0.936701286 1.137307539 1 11.29193369 -6.996422604 24.75271576 1.035736137 0.9371726 0.396423248 0.062804038 104.6652721 724192.0926 0.021903692 0.019221631 1.01E-07 6.996422604 -0.098563537 EELDQYK ddPTM_A459_MK2206_30min_R1 1 EELDQYK 7 0 A0A3B3IRX4;Q5SXQ8;A0A1B0GUT5;A0A6E2AE84;Q8IYJ2 A0A3B3IRX4 C10orf67 Uncharacterized protein C10orf67 0 134.66 0.03885 55507000 1805 2354.4 2254.2 1695.3 1894.9 2195.4 2876.3 1838.4 2607.8 2620.9 FALSE TRUE 1651.475272 2201.128132 2101.191185 1825.8723 1819.42212 2319.701651 2684.427275 1822.327063 2878.890142 2945.596879 0.560658956 0.747260478 0.713332907 0.619864963 0.617675193 0.787514974 0.911335592 0.618661391 0.977353745 1 11.52434429 -8.12139895 0.448494466 1.014117773 0.643406788 0.551009477 0.101672716 0.803715268 0.436103633 0.118935472 0.07583362 7.56E-09 8.12139895 -0.370710985 EELEFEVPFR ddPTM_A459_MK2206_30min_R1 1 EELEFEVPFR 10 0 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 0 153.24 0.0083507 1732100 876.44 758.72 567.34 673.62 944.47 817.99 879.54 736.66 781.88 848.36 FALSE TRUE 801.8941756 709.3271901 528.8305415 725.5023291 906.84976 864.3038869 820.8674914 730.2194593 863.159224 953.4612416 0.841034895 0.743949685 0.554642935 0.760914338 0.951113397 0.906490845 0.860934305 0.765861712 0.905290311 1 9.897030484 -6.07660649 6.00653711 0.883877742 0.707134684 0.486671467 0.087241691 0.208624296 12.84013165 0.026723816 0.034999279 8.38E-07 6.07660649 -0.176743058 EELMS(ph)SDLEETAGSTSIPK ddPTM_A459_MK2206_30min_R2 6 EELMSSDLEETAGSTSIPK 19 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.499)S(0.499)DLEET(0.002)AGSTSIPK;EELMS(0.69)S(0.31)DLEETAGSTSIPK;EELMS(0.477)S(0.477)DLEET(0.043)AGS(0.002)TSIPK;EELMS(0.5)S(0.5)DLEETAGSTSIPK;EELMS(0.552)S(0.448)DLEETAGSTSIPK;EELMS(0.638)S(0.362)DLEETAGSTSIPK 136.26 0.00029276 16500700 167195.3 153925.1 163343 165776 144079.4 131346.1 180941 142063.1 119313.5 179361 TRUE FALSE 179995.9007 146281.4034 168788.7741 152231.5705 138422.1188 136344.5679 157183.2294 160631.2349 129691.1726 173508.4653 1.037389735 0.843079346 0.972798496 0.877372584 0.797783086 0.785809313 0.905911012 0.925783273 0.747463084 1 17.40464653 -1.892237329 1.175333045 0.864466975 199.9999999 0.259696582 0.078973156 2388.147031 3.59046273 0.022507966 1281891.946 0.0128163 1.892237329 199.1355329 EELMS(ph)SDLEETAGSTSIPKR ddPTM_A459_MK2206_30min_R1 1 EELMSSDLEETAGSTSIPKR 20 1 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.5)S(0.5)DLEETAGSTSIPKR 152.38 4.59E-06 25580000 2509.3 2525.8 2473.6 2637.6 2886.2 2417.8 2047 2799.6 1562.3 998.28 TRUE FALSE 2295.870858 2361.369961 2305.698924 2840.748409 2771.236542 2554.693747 1910.448365 2775.123392 1724.706676 1121.954463 2.046313762 2.104693228 2.055073534 2.531964088 2.470008038 2.277003061 1.702786011 2.473472395 1.537234115 1 10.13179841 -8.493784052 3.855524501 1.003020632 2.201804983 0.729777019 0.239318532 0.098578882 3.570173597 0.237847193 0.062488136 3.21E-09 8.493784052 1.19878435 EELMS(ph)SDLEETAGSTSIPKR ddPTM_A459_MK2206_30min_R2 3 EELMSSDLEETAGSTSIPKR 20 1 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.5)S(0.5)DLEETAGSTSIPKR;EELMS(0.5)S(0.5)DLEETAGSTSIPKR;EELMS(0.499)S(0.499)DLEET(0.001)AGSTSIPKR 82.146 0.0017568 11094100 13022.6 23397.3 21510 24375 27489.8 22734.8 26219.8 17963.9 21077.9 17684 TRUE FALSE 14019.62027 22235.4241 22227.13266 22383.48453 26410.41233 23599.98875 22777.10876 20311.84341 22911.21764 17106.97253 0.819526672 1.299787211 1.299302529 1.308442186 1.543839056 1.379553788 1.331451765 1.187342961 1.339291193 1 14.06229684 -4.760996566 5.962560547 1.317355135 0.800567437 0.539770833 0.131858679 0.100102431 13.49800696 0.032112603 0.211699659 1.73E-05 4.760996566 -0.516787698 EELMSS(ph)DLEETAGSTSIPK ddPTM_A459_MK2206_30min_R1 5 EELMSSDLEETAGSTSIPK 19 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.023)S(0.977)DLEETAGSTSIPK;EELMS(0.025)S(0.975)DLEETAGSTSIPK;EELMS(0.261)S(0.739)DLEETAGSTSIPK;EELMS(0.18)S(0.82)DLEETAGSTSIPK;EELMS(0.086)S(0.914)DLEETAGSTSIPK 284.15 5.06E-72 157443800 33969 37398.1 36422.4 27253.2 29277.5 31854.8 35698.2 30263.5 39951.1 40720.1 TRUE FALSE 31079.75817 34963.47689 33950.14897 29352.24619 28111.31518 33658.39125 33316.83821 29998.90941 44104.15981 45764.81341 0.679119084 0.763981633 0.741839558 0.641371482 0.614256086 0.735464405 0.728001181 0.655501622 0.96371331 1 15.48195118 -8.281939867 9.33541455 0.98281933 0.696772738 0.85925279 0.046444085 0.144464218 60.80728076 0.044777667 0.012430422 5.22E-09 8.281939867 -0.286046592 EELMSS(ph)DLEETAGSTSIPK ddPTM_A459_MK2206_30min_R2 8 EELMSSDLEETAGSTSIPK 19 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.421)S(0.541)DLEET(0.036)AGS(0.001)T(0.001)SIPK;EELMS(0.056)S(0.944)DLEETAGSTSIPK;EELMS(0.361)S(0.638)DLEET(0.002)AGSTSIPK;EELMS(0.049)S(0.949)DLEET(0.002)AGSTSIPK;EELMS(0.209)S(0.791)DLEETAGSTSIPK;EELMS(0.008)S(0.992)DLEETAGSTSIPK;EELMS(0.155)S(0.845)DLEETAGSTSIPK;EELMS(0.132)S(0.868)DLEETAGSTSIPK 184.21 6.90E-14 14699800 104744.4 102020.6 100938.4 112585.6 95689 75070.9 113046.7 98227.3 78152.3 113355.3 TRUE FALSE 112763.7118 96954.40536 104303.6359 103386.9963 91931.76906 77927.7757 98203.5325 111065.9454 84949.84579 109656.5258 1.028335623 0.884164482 0.951184939 0.942825751 0.838361131 0.710653334 0.895555752 1.012853038 0.77469029 1 16.74263215 -1.522879067 0.791983712 0.877450105 33.67127421 0.163841878 0.091045406 912.9791056 3.287804972 0.033620143 53674.42535 0.029999978 1.522879067 32.7938241 EELMSS(ph)DLEETAGSTSIPKR ddPTM_A459_MK2206_30min_R1 1 EELMSSDLEETAGSTSIPKR 20 1 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.4)S(0.6)DLEETAGSTSIPKR 76.614 0.0028814 23768000 2004.1 2003.2 1974.7 1806.2 2291.8 1700.3 1656.7 1878.8 1474.2 1004 TRUE FALSE 1833.640771 1872.791316 1840.662866 1945.313837 2200.512753 1796.569517 1546.184566 1862.37385 1627.448365 1128.3831 1.625016159 1.659712305 1.631239307 1.723983492 1.950146855 1.59216273 1.370265618 1.650480098 1.442283535 1 10.14004125 -9.025692534 0.523037143 0.968717996 1.701566898 0.720392582 0.126335306 1.092810746 0.536675899 0.21388662 0.067882749 9.43E-10 9.025692534 0.732848901 EELQANGSAPAADKEEPAAAGS(ph)GAASPSAAEK ddPTM_A459_MK2206_30min_R2 1 EELQANGSAPAADKEEPAAAGSGAASPSAAEK 32 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 EELQANGSAPAADKEEPAAAGS(0.717)GAAS(0.269)PS(0.014)AAEK 67.675 0.00010809 19069000 48078 31136 43916 35723 27064 23962 41705 31101 21871 54151 TRUE FALSE 51758.88865 29589.83152 45380.13752 32804.31663 26001.33137 24873.8907 36229.0834 35166.00749 23773.30005 52384.0573 0.988065669 0.564863301 0.86629673 0.626227106 0.496359631 0.47483704 0.691605142 0.671311259 0.453827009 1 15.67684018 -3.012501802 1.82258634 0.63294966 200 0.251521968 0.167585645 1075.270866 7.963126555 0.043353971 892731.4494 0.000971624 3.012501802 199.3670503 EELQANGSAPAADKEEPAAAGSGAAS(ph)PSAAEK ddPTM_A459_MK2206_30min_R2 1 EELQANGSAPAADKEEPAAAGSGAASPSAAEK 32 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 EELQANGSAPAADKEEPAAAGS(0.104)GAAS(0.832)PS(0.064)AAEK 92.623 4.07E-08 13875000 41977 29827 37802 30512 20726 16668 37317 28248 17253 40898 TRUE FALSE 45190.79139 28345.83455 39062.29981 28019.072 19912.1931 17302.31242 32417.23307 31940.11059 18753.63475 39563.50161 1.142234371 0.716464251 0.987331713 0.708205059 0.503297036 0.437330158 0.819372193 0.80731253 0.474013522 1 15.2718825 -5.856034465 5.392897304 0.655314546 0.924459085 0.289429478 0.191764586 0.263758231 12.00811972 0.053672272 0.081349172 1.39E-06 5.856034465 0.269144538 EELS(ph)HSPEPCTK ddPTM_A459_MK2206_30min_R1 1 EELSHSPEPCTK 12 0 P41229-4;P41229-3;P41229-2;P41229-5;P41229 P41229-4 KDM5C Lysine-specific demethylase 5C 1 EELS(0.883)HS(0.096)PEPCT(0.021)K 202.29 6.58E-05 8293300 3164.5 2943.5 3401.4 2449.5 2787 2484.4 3078.8 2600.9 3039.3 2694 TRUE FALSE 2895.342658 2751.877615 3170.522445 2638.160914 2675.987888 2625.064581 2873.41887 2578.160606 3355.246111 3027.753059 0.956267767 0.908884431 1.047153577 0.871326315 0.883819729 0.867000885 0.949026824 0.851509537 1.108163726 1 11.56403183 -8.264543213 24.99982654 1.054081867 0.917739298 0.459636913 0.059502094 253.8420213 2044516.317 0.049392392 0.014849202 5.44E-09 8.264543213 -0.136342568 EELSHS(ph)PEPCTK ddPTM_A459_MK2206_30min_R1 1 EELSHSPEPCTK 12 0 P41229-4;P41229-3;P41229-2;P41229-5;P41229 P41229-4 KDM5C Lysine-specific demethylase 5C 1 EELS(0.394)HS(0.581)PEPCT(0.025)K 147.52 0.00062738 6351900 1794.3 1837.5 1713.3 1269.7 1585.2 1244.7 1954.7 1569.5 1354.5 1135.1 TRUE FALSE 1641.685363 1717.878416 1597.00597 1367.492514 1522.058127 1315.173838 1824.30553 1555.778027 1495.305122 1275.724758 1.286864861 1.346590168 1.251842108 1.071933821 1.193092882 1.030922878 1.430014992 1.219524837 1.172122053 1 10.31710138 -13.89909618 0.266034857 1.00E-22 1.239040644 0.268500379 0.11178381 214.2411371 2.848241026 116.9009794 0.150093055 1.26E-14 13.89909618 1.239040644 EELSHS(ph)PEPCTK ddPTM_A459_MK2206_30min_R2 1 EELSHSPEPCTK 12 0 P41229-4;P41229-3;P41229-2;P41229-5;P41229 P41229-4 KDM5C Lysine-specific demethylase 5C 1 EELS(0.039)HS(0.779)PEPCT(0.181)K 110.92 0.0070148 17355000 15449 22617 18448 23784 25851 24280 25857 17829 18608 19087 TRUE FALSE 16631.78732 21493.87267 19063.04711 21840.77112 24835.95985 25203.99241 22461.94484 20159.31152 20226.4902 18464.19275 0.900758974 1.164084071 1.032433281 1.182871703 1.34508777 1.365020001 1.216513776 1.091805734 1.095444056 1 14.17244257 -4.005385834 1.010701252 1.193789841 9.98E-13 0.306381058 0.115904761 9.779301266 2.577385737 0.039649199 18.44329793 9.88E-05 4.005385834 -1.193789841 EELSSGDSLS(ph)PDPWKR ddPTM_A459_MK2206_30min_R1 2 EELSSGDSLSPDPWKR 16 1 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 EELS(0.003)S(0.05)GDS(0.074)LS(0.874)PDPWKR;EELS(0.001)S(0.002)GDS(0.024)LS(0.973)PDPWKR 79.565 0.012568 12162400 5722.3 4886.8 4339 3425.26 4508.7 3960.8 5544.2 5380.7 5377.4 5416.5 TRUE FALSE 5235.588336 4568.668432 4044.480769 3689.074119 4329.108932 4185.057073 5174.356534 5333.657107 5936.399973 6087.536912 0.860050364 0.750495397 0.664387063 0.606004394 0.711142946 0.687479539 0.849991813 0.876160126 0.975172727 1 12.5716429 -7.716675841 1.392589667 0.98611284 0.70659398 0.734822295 0.06545932 0.241105524 0.869995083 0.056495231 0.022644185 1.92E-08 7.716675841 -0.27951886 EELTPGAPQHQLPPVPGS(ph)PEPYPGQQAPGPEPSQPLLELTPR ddPTM_A459_MK2206_30min_R2 2 EELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPR 42 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 EELTPGAPQHQLPPVPGS(0.949)PEPY(0.051)PGQQAPGPEPSQPLLELTPR;EELTPGAPQHQLPPVPGS(0.978)PEPY(0.022)PGQQAPGPEPSQPLLELTPR 101.32 7.72E-17 7734700 35375 29133 29252 29271 27967 31409 33411 26010 21453.3 33296 TRUE FALSE 38083.3372 27686.29758 30227.24708 26879.46567 26868.87506 32604.2915 29024.09557 29409.59631 23319.26926 32209.55425 1.18236151 0.859567859 0.938455927 0.8345184 0.834189596 1.012255285 0.901102056 0.913070578 0.72398609 1 14.97520107 -4.757788762 24.99965184 0.890157152 1.182361924 0.541700985 0.080453448 80.01804687 547887.0503 0.019379561 0.139626666 1.75E-05 4.757788762 0.292204771 EELVSQGIMPPLKS(ph)PAAFHEQR ddPTM_A459_MK2206_30min_R2 1 EELVSQGIMPPLKSPAAFHEQR 22 1 W0Z7M9;A0A499FIJ6;A0A494BZX7;B0QY83;B0QY74;A0A669KBG1 W0Z7M9 mkl1;MKL1 Phosphatase and actin regulator 1 EELVSQGIMPPLKS(1)PAAFHEQR 71.853 0.0014068 4252200 40258 40798 39522 44935 27229 25668 25547 15831 16200 22659 TRUE FALSE 43340.18343 38772.03065 40839.64375 41263.66676 26159.85265 26644.81373 22192.64821 17900.16606 17609.04672 21919.63869 1.977230741 1.768826175 1.863153145 1.882497579 1.193443606 1.215568108 1.012455019 0.816626876 0.803345665 1 14.4199364 -6.516647428 1.184177552 0.887448808 1.908780162 0.931010852 0.116814553 0.111253413 0.327691804 0.05432315 0.06200183 3.04E-07 6.516647428 1.021331354 EENISAPLIS(ph)SSPVK ddPTM_A459_MK2206_30min_R1 1 EENISAPLISSSPVK 15 0 A2A2Y4-4;A2A2Y4-3;A2A2Y4-5;A2A2Y4-2;A2A2Y4 A2A2Y4-4 FRMD3 FERM domain-containing protein 3 1 EENISAPLIS(0.493)S(0.254)S(0.254)PVK 84.507 0.021677 5770100 2695.6 2618.3 2410.9 2425.9 2955.8 2096.1 2845.9 3151.7 3453.2 2759.8 TRUE FALSE 2466.325065 2447.848194 2247.254825 2612.743238 2838.064227 2214.779371 2656.055204 3124.145019 3812.172497 3101.704859 0.795151433 0.789194429 0.724522457 0.842357141 0.91500138 0.714052262 0.856321063 1.007234782 1.229057138 1 11.5988457 -7.831343693 2.882112292 1.115779768 0.80014688 0.744542821 0.075350759 0.123934238 2.04184301 0.047350881 0.020280463 1.47E-08 7.831343693 -0.315632888 EENISAPLISSS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 EENISAPLISSSPVK 15 0 A2A2Y4-4;A2A2Y4-3;A2A2Y4-5;A2A2Y4-2;A2A2Y4 A2A2Y4-4 FRMD3 FERM domain-containing protein 3 1 EENISAPLISS(0.215)S(0.785)PVK;EENISAPLISS(0.211)S(0.789)PVK 166.52 7.90E-05 19001200 242960 109050 130838 113758 131698 154156 283670 116438 171119 176542 TRUE FALSE 261561.2044 103634.7356 135200.0736 104463.6075 126526.8748 160022.5146 246423.7883 131656.8464 186002.6213 170781.449 1.53155513 0.606826656 0.791655501 0.611680063 0.740870133 0.937001738 1.442918945 0.770908358 1.089126614 1 17.38179175 -7.004031039 24.76022141 1.075692191 0.826789791 0.109622298 0.288725688 306.6466002 1883554.615 0.101571052 0.08752145 9.91E-08 7.004031039 -0.248902399 EENPES(ph)DGEPVVEDGTSVK ddPTM_A459_MK2206_30min_R1 3 EENPESDGEPVVEDGTSVK 19 0 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;H0Y6I0;A0A087WTW2 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 EENPES(1)DGEPVVEDGTSVK;EENPES(1)DGEPVVEDGTSVK;EENPES(1)DGEPVVEDGTSVK 247.18 1.63E-37 25616000 9057.03 10339.74 10277.93 7571.23 8453.54 8216.12 11039.75 9585.12 12939.02 14628.11 TRUE FALSE 8286.682038 9666.621047 9580.292748 8154.367446 8116.817601 8681.309614 10303.30842 9501.318306 14284.07743 16440.3507 0.504045333 0.587981438 0.582730437 0.495997171 0.493713166 0.528048931 0.626708554 0.577926741 0.868842623 1 14.00495345 -8.355644556 1.952700112 1.004431981 0.542423165 0.93422109 0.041620131 0.075007066 0.5666364 0.041471682 0.011895821 4.41E-09 8.355644556 -0.462008816 EENPES(ph)DGEPVVEDGTSVK ddPTM_A459_MK2206_30min_R2 2 EENPESDGEPVVEDGTSVK 19 0 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;H0Y6I0;A0A087WTW2 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 EENPES(1)DGEPVVEDGTSVK;EENPES(0.75)DGEPVVEDGT(0.241)S(0.01)VK 186.6 2.43E-15 57280000 215265 201905 219914 217184 182153 173528 220630 181756 157182 234495 TRUE FALSE 231745.8539 191878.6913 227245.823 199439.3725 175000.758 180131.7296 191661.016 205512.1333 170853.4062 226843.4474 1.021611409 0.845863936 1.001773803 0.879193888 0.771460494 0.794079493 0.844904352 0.905964601 0.753177613 1 17.79133746 -5.981611028 10.25898285 0.836556437 0.944657366 0.274407225 0.079711629 0.430252166 228.5147246 0.021255045 0.03124651 1.04E-06 5.981611028 0.108100929 EENS(ph)RDLEELPK ddPTM_A459_MK2206_30min_R2 1 EENSRDLEELPK 12 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 EENS(1)RDLEELPK 121.56 0.012814 0 26610 29653 26139 27011 25828 22000 38072 22930 22951 32078 TRUE FALSE 28647.28206 28180.47514 27010.46121 24804.1149 24813.86294 22837.22542 33073.10067 25927.02973 24947.23649 31031.29749 0.92317384 0.90813074 0.870426421 0.799325742 0.799639878 0.735941687 1.065798189 0.835512268 0.803937912 1 14.9214364 -9.551841647 10.49443365 1.000012106 0.860006246 0.189485378 0.086733422 0 0 0.085976812 0.02085244 2.81E-10 9.551841647 -0.14000586 EEPDSENIPQELLSNLGHPES(ph)PPR ddPTM_A459_MK2206_30min_R1 5 EEPDSENIPQELLSNLGHPESPPR 24 0 D6RF40;D6RAG5;D6R9R7;A0A0A0MTL5;Q13309-2;Q13309 D6RF40 SKP2 S-phase kinase-associated protein 2 1 EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLS(0.005)NLGHPES(0.995)PPR 186.45 2.57E-26 30916500 6385.31 5434.37 6059.15 4328.76 6367.56 5620.03 8072.12 5682.31 7698.43 8699.03 TRUE FALSE 5842.205854 5080.591525 5647.87178 4662.161845 6113.926602 5938.231242 7533.643603 5632.630163 8498.709348 9776.731511 0.597562268 0.519661558 0.577685065 0.476863033 0.625354864 0.607384097 0.770568732 0.576126097 0.8692792 1 13.25513652 -8.427450359 0.492840566 1.016368295 0.537727307 0.788344197 0.072229971 0.432089026 0.26591419 0.080527268 0.040884355 3.74E-09 8.427450359 -0.478640988 EEPDSENIPQELLSNLGHPES(ph)PPR ddPTM_A459_MK2206_30min_R2 4 EEPDSENIPQELLSNLGHPESPPR 24 0 D6RF40;D6RAG5;D6R9R7;A0A0A0MTL5;Q13309-2;Q13309 D6RF40 SKP2 S-phase kinase-associated protein 2 1 EEPDSENIPQELLS(0.004)NLGHPES(0.996)PPR;EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLS(0.001)NLGHPES(0.999)PPR 149.96 7.62E-10 26106600 46629 51207.6 50084.7 55804.3 54560.8 53657.4 59782.5 41319.6 47272.3 53369.1 TRUE FALSE 50198.95209 48664.70505 51754.4989 51244.91018 52418.46885 55699.36996 51932.98594 46720.21359 51383.95921 51627.67064 0.972326496 0.942608962 1.002456595 0.992586137 1.015317333 1.078866609 1.005913792 0.904945217 0.995279442 1 15.65585689 -5.2719209 23.99059843 0.999418733 0.95746773 0.149289417 0.040058848 766.6720176 1754800.816 0.011588751 0.024570918 5.35E-06 5.2719209 -0.041951003 EEPEALY(ph)AAVNK ddPTM_A459_MK2206_30min_R2 2 EEPEALYAAVNK 12 0 A0A087WVF7;Q9NZM3-2;Q9NZM3;Q9NZM3-4;Q9NZM3-3 A0A087WVF7 ITSN2 Intersectin-2 1 EEPEALY(1)AAVNK;EEPEALY(1)AAVNK 169.37 8.23E-05 1353800 18170.4 22977 19623.1 18849.5 23143 16660.2 22670 17816.3 15502.4 21553.4 TRUE FALSE 19561.53979 21835.99559 20277.32436 17309.43555 22234.28954 17294.21559 19693.40177 20144.95158 16850.77073 20850.11432 0.938198203 1.047284214 0.97252821 0.830184204 1.066386936 0.829454233 0.944522484 0.96617943 0.808186011 1 14.34776767 -5.535830519 24.9728682 0.920922895 0.997032485 0.123351278 0.080817331 395.7395249 763039.9795 0.020531033 0.035585348 2.91E-06 5.535830519 0.07610959 EEPGS(ph)DSGTTAVVALIR ddPTM_A459_MK2206_30min_R1 1 EEPGSDSGTTAVVALIR 17 0 O15355 O15355 PPM1G Protein phosphatase 1G 1 EEPGS(0.744)DS(0.171)GT(0.029)T(0.055)AVVALIR 109.1 0.0022713 2525300 627.56 783.86 664.72 533.65 639.92 716.54 643.1 568.32 680.7 714.24 TRUE FALSE 574.1827266 732.8305715 619.6006584 574.7518155 614.4306313 757.1098756 600.1999724 563.3512382 751.4612009 802.7254434 0.71529155 0.912928047 0.771871209 0.716000496 0.765430617 0.943174135 0.747702689 0.701798159 0.936137265 1 9.648762816 -8.449374747 5.257623878 0.999069909 0.789829618 0.480139443 0.077641211 0.168782745 7.921488867 0.07546527 0.019616405 3.55E-09 8.449374747 -0.209240292 EEPGS(ph)PLSPAPR ddPTM_A459_MK2206_30min_R2 1 EEPGSPLSPAPR 12 0 B2RBV5 B2RBV5 LOC93622 1 EEPGS(0.995)PLS(0.005)PAPR 123.26 0.002756 0 25905 28855 33597 35042 39246 38202 29819 25418 35271 32284 TRUE FALSE 27888.30672 27422.10266 34717.10721 32178.95651 37705.00484 39655.80388 25903.72948 28740.21987 38338.80782 31230.57572 0.892980871 0.878053063 1.111638399 1.03036706 1.207310591 1.269774987 0.829434901 0.920259048 1.227604901 1 14.93067154 -5.255402281 24.07075364 1.073082725 0.885516924 0.249347525 0.131173582 429.1385415 1711011.461 0.035452294 0.088622994 5.55E-06 5.255402281 -0.187565801 EEPGSPLS(ph)PAPR ddPTM_A459_MK2206_30min_R1 1 EEPGSPLSPAPR 12 0 B2RBV5 B2RBV5 LOC93622 1 EEPGS(0.004)PLS(0.996)PAPR 100.02 0.01383 5828400 3314.2 3763.4 3520.8 3374.3 3644.3 2956.7 3358.7 3023.9 2878.4 2721.2 TRUE FALSE 3032.309886 3518.401976 3281.817906 3634.189171 3499.139814 3124.105799 3134.647251 2997.462361 3177.61998 3058.3228 0.991494386 1.150435126 1.07307767 1.18829483 1.14413685 1.021509502 1.02495631 0.98010006 1.039007387 1 11.57852497 -6.815905009 7.34499074 1.011983966 1.114028091 0.465414194 0.051544248 0.198333884 22.1579904 0.018013767 0.015966464 1.53E-07 6.815905009 0.102044124 EEPLS(ph)EEEPCTSTAIAS(ph)PEK ddPTM_A459_MK2206_30min_R1 2 EEPLSEEEPCTSTAIASPEK 20 0 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 EEPLS(1)EEEPCTSTAIAS(1)PEK;EEPLS(1)EEEPCTST(0.001)AIAS(0.999)PEK 168.69 1.01E-08 13969700 6346.6 7643.4 7339.3 5840.1 4390 4184.1 5959.2 5528.5 8025.4 8236 TRUE FALSE 5806.788343 7145.813271 6841.128764 6289.905514 4215.137004 4421.000126 5561.672641 5480.164907 8859.669049 9256.337859 0.627331071 0.771991405 0.739075093 0.679524193 0.455378473 0.477618708 0.60085022 0.592044607 0.957146248 1 13.17622581 -8.284018422 6.47707778 0.984414561 0.618316219 0.697632651 0.094976626 0.120095091 20.13811226 0.097817993 0.027719265 5.20E-09 8.284018422 -0.366098343 EEPLS(ph)EEEPCTSTAIAS(ph)PEK ddPTM_A459_MK2206_30min_R2 2 EEPLSEEEPCTSTAIASPEK 20 0 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 EEPLS(1)EEEPCT(0.002)S(0.001)T(0.003)AIAS(0.994)PEK;EEPLS(1)EEEPCTSTAIAS(1)PEK 121.75 0.0009786 9657900 98063 69485 85903 71412 66175 56875 97085 72838 52121 101672 TRUE FALSE 105570.7787 66034.47594 88766.96315 65577.41116 63576.637 59039.41798 84337.62288 82358.17669 56654.39037 98354.45097 1.073370627 0.671392858 0.902521058 0.66674574 0.646403252 0.600271949 0.857486591 0.837360952 0.576022639 1 16.58570272 -4.753711917 24.88387764 0.743293892 1.073371256 0.338334725 0.134904432 298.0873691 959814.4422 0.032360158 0.33775441 1.76E-05 4.753711917 0.330077364 EEPLS(ph)EEEPCTSTAIAS(ph)PEKK ddPTM_A459_MK2206_30min_R1 3 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 EEPLS(1)EEEPCTSTAIAS(1)PEKK;EEPLS(1)EEEPCTST(0.003)AIAS(0.997)PEKK;EEPLS(0.97)EEEPCT(0.021)S(0.007)T(0.004)AIAS(0.998)PEKK 126.45 0.00016075 150739400 17358 24977.1 22063.5 17703.5 11894.1 11406.6 16374.9 16348.3 23550.7 26772.4 TRUE FALSE 15881.61095 23351.08625 20565.89109 19067.02664 11420.33281 12052.43183 15282.5603 16205.36854 25998.87954 30089.16703 0.527818232 0.776062901 0.683498186 0.633684097 0.37954965 0.400557178 0.507909052 0.538578171 0.864061126 1 14.87695655 -8.389733145 3.310658422 0.994290103 0.556882189 0.641175412 0.114435579 0.168452675 3.295715647 0.125779384 0.033672857 4.08E-09 8.389733145 -0.437407915 EEPLS(ph)EEEPCTSTAIAS(ph)PEKK ddPTM_A459_MK2206_30min_R2 3 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 EEPLS(0.998)EEEPCT(0.001)STAIAS(1)PEKK;EEPLS(1)EEEPCTSTAIAS(1)PEKK;EEPLS(0.999)EEEPCT(0.001)ST(0.001)AIAS(0.999)PEKK 94.957 0.0010545 197820000 321097 220211 250985 185470 194818 134768 305196 202127 145577 286229 TRUE FALSE 345680.4332 209275.642 259352.7146 170316.5077 187168.4664 139896.6907 265123.3986 228545.6929 158239.0243 276889.3712 1.248442408 0.755809589 0.936665476 0.615106701 0.675968404 0.50524399 0.957506594 0.825404355 0.571488258 1 18.07895015 -2.561647634 1.322582042 0.739078655 199.9985045 0.436825596 0.163558895 524.3626304 3.100169339 0.04634859 314727.0431 0.002743799 2.561647634 199.2594259 EEPLS(ph)EEEPCTSTAIASPEKK ddPTM_A459_MK2206_30min_R1 2 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 EEPLS(1)EEEPCTSTAIASPEKK;EEPLS(1)EEEPCTSTAIASPEKK 201.85 4.15E-17 169522000 10283.6 11263.6 10947.4 8586.3 9175.7 8068.5 10137.9 10697.7 11253.9 11898.6 TRUE FALSE 9408.925819 10530.33759 10204.32099 9247.618314 8810.212439 8525.331497 9461.619189 10604.17114 12423.78318 13372.6884 0.703592691 0.787451055 0.763071769 0.691530232 0.658821336 0.637518145 0.707533063 0.792972275 0.929041552 1 13.70700191 -8.226041287 1.957079184 0.995902689 0.707106766 0.858436977 0.041791573 0.132818575 0.922950322 0.04531208 0.013444744 5.94E-09 8.226041287 -0.288795923 EEPLS(ph)EEEPCTSTAIASPEKK ddPTM_A459_MK2206_30min_R2 1 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 EEPLS(1)EEEPCTSTAIASPEKK 96.777 0.00019397 28776000 47540 56621 59030 56662 47582 38598 49955 46769 35782 54838 TRUE FALSE 51179.69895 53809.28347 60998.03074 52032.53335 45713.6916 40066.87394 43395.84849 52881.86888 38894.25368 53048.64055 0.964769284 1.014338594 1.149850969 0.980845745 0.861731632 0.755285593 0.818038842 0.99685625 0.733180969 1 15.69502816 -6.157937833 3.724906883 0.852972723 1.04279629 0.441809487 0.093018009 0.214535536 5.427145534 0.027960451 0.036907078 6.95E-07 6.157937833 0.189823567 EEPLSEEEPCTS(ph)TAIASPEKK ddPTM_A459_MK2206_30min_R1 1 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 EEPLSEEEPCT(0.038)S(0.332)T(0.332)AIAS(0.298)PEKK 68.238 0.03524 0 1106.8 967.69 1186.2 714.08 633.01 683.26 1260.3 924.33 1140.1 1168.5 TRUE FALSE 1012.660848 904.6932051 1105.684049 769.0785653 607.7958713 721.9455907 1176.227687 916.2486803 1258.617475 1313.262602 0.771103088 0.688889795 0.841936752 0.585624356 0.46281366 0.549734371 0.895653074 0.697688855 0.958389794 1 10.35893971 -8.144819572 1.2184244 1.003531384 0.662105416 0.475188202 0.123766619 0.430904625 1.203411465 0.123955978 0.041057335 7.16E-09 8.144819572 -0.341425968 EEPLSEEEPCTS(ph)TAIASPEKK ddPTM_A459_MK2206_30min_R2 1 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 EEPLSEEEPCT(0.046)S(0.5)T(0.318)AIAS(0.136)PEKK 95.344 0.00021529 9895200 39775 24410 30033 25011 19353 13523 33244 25599 19878 32455 TRUE FALSE 42820.20458 23197.8349 31034.28523 22967.52129 18593.10398 14037.62724 28879.02287 28944.87719 21606.95251 31395.99601 1.363874698 0.738878769 0.988479079 0.731543006 0.592212586 0.447115207 0.919831397 0.921928936 0.688207264 1 14.93829296 -2.837721977 1.4956779 0.760975782 199.9988804 0.489138721 0.174485253 407.5670482 3.602177551 0.050769356 276153.5042 0.001453042 2.837721977 199.2379046 EEPLSEEEPCTSTAIAS(ph)PEKK ddPTM_A459_MK2206_30min_R2 1 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 EEPLSEEEPCT(0.008)S(0.008)T(0.093)AIAS(0.891)PEKK 112.74 4.72E-05 12960000 69981 48768 66236 50624 48843 28282 63141 52961 35117 58628 TRUE FALSE 75338.79917 46346.25204 68444.27518 46487.85726 46925.1784 29358.29133 54850.51085 59883.18454 38171.41318 56714.97316 1.328375823 0.817178418 1.206811383 0.819675205 0.827386064 0.517646217 0.967125748 1.055861992 0.67303943 1 15.79144205 -5.777112315 24.86587085 0.831259277 1.087427518 0.306573377 0.191378836 285.447052 452874.8744 0.053332746 0.07941972 1.67E-06 5.777112315 0.256168241 EEPPEPVPS(ph)PIIPILPSTAGK ddPTM_A459_MK2206_30min_R1 1 EEPPEPVPSPIIPILPSTAGK 21 0 Q8NEZ4;Q8NEZ4-3;H7BY37;Q8NEZ4-2;H0Y765;H7C2V8 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 EEPPEPVPS(1)PIIPILPSTAGK 75.215 0.0020311 1629400 1287.4 1782.4 1638.4 1184.9 1411.4 1324.1 1441.2 1578.1 1550.6 1586.4 TRUE FALSE 1177.89987 1666.365436 1527.189973 1276.161203 1355.180949 1399.069398 1345.060178 1564.302838 1711.790419 1782.935209 0.660652089 0.934619176 0.856559434 0.715764206 0.760084238 0.784700078 0.754407772 0.877375033 0.960096817 1 10.80003856 -8.113955743 2.301024286 0.990753787 0.78666565 0.556662128 0.071123449 0.246631768 2.337228048 0.06302137 0.01973394 7.69E-09 8.113955743 -0.204088137 EEPS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 EEPSPVK 7 0 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EEPS(1)PVK;EEPS(1)PVK 122.28 0.0080859 38188000 860790 377160 474920 369170 333070 261670 554980 387970 258740 584880 TRUE FALSE 926692.7442 358430.7828 490753.5958 339007.6301 319991.9983 271628.0352 482110.4593 438679.0111 281244.7375 565795.4135 1.637858353 0.633498919 0.867369342 0.599169986 0.565561315 0.48008172 0.852093262 0.775331508 0.497078504 1 19.10992096 -4.759523079 24.99762186 0.685942477 1.637859555 0.746785504 0.164305838 23.99884171 312974.6288 0.039814625 0.251591888 1.74E-05 4.759523079 0.951917078 EEPS(ph)PVKAEVAEK ddPTM_A459_MK2206_30min_R1 5 EEPSPVKAEVAEK 13 1 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK 172.57 0.00081728 411403600 15407.1 19611.3 15037.6 12245.6 10768 10155 13657 11571.5 16597.9 21043.8 TRUE FALSE 14096.64524 18334.60081 14016.88961 13188.75823 10339.08776 10729.96732 12745.96645 11470.3316 18323.3111 23650.86482 0.596030858 0.775219044 0.59265865 0.557643804 0.437154744 0.453681817 0.538921792 0.484985716 0.774741695 1 14.52960532 -8.520449673 3.54044992 0.998971153 0.556420045 0.711100577 0.090505501 0.122627276 4.103942234 0.099045662 0.026128721 3.02E-09 8.520449673 -0.442551108 EEPS(ph)PVKAEVAEK ddPTM_A459_MK2206_30min_R2 4 EEPSPVKAEVAEK 13 1 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK 130.4 0.0077327 1003730000 695352 407821 528791 435363 452683 267963 592550 408789 289951 593397 TRUE FALSE 748588.6838 387569.2022 546420.628 399792.4502 434908.3909 278160.5197 514747.4732 462219.1259 315170.4139 574034.5045 1.304083078 0.675167083 0.951895093 0.696460661 0.75763458 0.48457108 0.896718698 0.805211398 0.549044372 1 19.13077793 -4.756607069 24.9263793 0.751331247 1.304083954 0.520940814 0.157173509 111.2016896 573538.9837 0.037344954 0.297537003 1.75E-05 4.756607069 0.552752707 EEPS(ph)QNDISPK ddPTM_A459_MK2206_30min_R1 1 EEPSQNDISPK 11 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 EEPS(0.928)QNDIS(0.072)PK 120.96 0.0045795 3685800 1733.6 3237.9 2322.8 2614.7 1185.7 1261.7 1236.3 1394.5 1913.4 1722.4 TRUE FALSE 1586.148217 3027.112121 2165.134808 2816.084647 1138.471058 1333.136364 1153.828683 1382.308034 2112.304777 1935.783915 0.819382889 1.56376551 1.118479594 1.454751548 0.588118875 0.68868036 0.596052418 0.714081785 1.091188309 1 10.9187022 -6.264042426 24.99980033 0.751658985 1.25367027 0.464835919 0.240159413 186.9537949 1795511.154 0.07038303 0.083485563 5.44E-07 6.264042426 0.502011285 EEPS(ph)QNDISPK ddPTM_A459_MK2206_30min_R2 4 EEPSQNDISPK 11 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 EEPS(0.999)QNDIS(0.001)PK;EEPS(0.999)QNDIS(0.001)PK;EEPS(1)QNDISPK;EEPS(0.949)QNDIS(0.051)PK 132.86 0.0019305 279608300 424544 359782 361331 322753 346744 238329 472536 297312 282375 427857 TRUE FALSE 457047.4151 341915.7491 373377.5952 296383.0475 333129.0883 247398.7771 410491.4556 336171.6992 306935.4671 413896.0611 1.104256498 0.82609085 0.902104732 0.71608086 0.804861702 0.597731654 0.99177425 0.81221285 0.741576197 1 18.65890899 -3.073101744 1.34417753 0.805566106 27.77327507 0.33601121 0.117329643 143.5007002 3.759404411 0.032453419 11525.26312 0.000845081 3.073101744 26.96770896 EEPSQNDIS(ph)PK ddPTM_A459_MK2206_30min_R1 5 EEPSQNDISPK 11 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 EEPS(0.306)QNDIS(0.694)PK;EEPSQNDIS(1)PK;EEPS(0.001)QNDIS(0.999)PK;EEPSQNDIS(1)PK;EEPS(0.064)QNDIS(0.936)PK 209.11 1.80E-05 365789700 19354.7 27261 24716.3 23780.5 13581 11087.5 13738.2 15413.4 19102.1 17446.9 TRUE FALSE 17708.48113 25486.30395 23038.62642 25612.07823 13040.04001 11715.26467 12821.74974 15278.64227 21087.83165 19608.35369 0.903109022 1.299767658 1.174939354 1.306181979 0.665024725 0.597462941 0.653892211 0.779190467 1.075451412 1 14.25918079 -6.263421147 24.99830294 0.767180538 1.180478652 0.51983561 0.175627456 134.9588035 1702387.894 0.05446656 0.064866786 5.45E-07 6.263421147 0.413298115 EEPSQNDIS(ph)PK ddPTM_A459_MK2206_30min_R2 2 EEPSQNDISPK 11 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 EEPS(0.002)QNDIS(0.998)PK;EEPSQNDIS(1)PK 175.01 9.90E-05 250463000 738910 729500 699050 555770 591470 412470 849330 582570 464900 751420 TRUE FALSE 795481.5177 693274.0908 722355.9781 510361.8132 568245.9159 428166.8349 737811.9508 658713.8993 505336.1617 726901.2269 1.094346093 0.953739057 0.993747089 0.702106138 0.781737456 0.589030282 1.015009913 0.906194507 0.695192336 1 19.47139982 -5.678169988 7.851371601 0.80688538 1.010409633 0.329799507 0.131311846 0.292863322 23.96017319 0.036014695 0.062490783 2.10E-06 5.678169988 0.203524253 EEPVAIES(ph)PGQDLLGESR ddPTM_A459_MK2206_30min_R1 1 EEPVAIESPGQDLLGESR 18 0 Q96RG2-4;Q96RG2;Q96RG2-2 Q96RG2-4 PASK PAS domain-containing serine/threonine-protein kinase 1 EEPVAIES(1)PGQDLLGESR 187.04 1.93E-10 2223500 1362.5 1280.7 1496.8 1113.1 1372.8 1020.1 1278.4 1331.2 868.04 1183.5 TRUE FALSE 1246.61222 1197.326197 1395.201386 1198.831155 1318.118469 1077.85718 1193.120269 1319.561459 958.2758643 1330.120915 0.937217216 0.900163424 1.048928237 0.901294868 0.990976425 0.810345261 0.897001359 0.992061281 0.720442671 1 10.37734168 -6.740667934 24.99843846 0.884288356 0.954784831 0.148425212 0.085909794 480.9570467 578830.6309 0.026964987 0.026936247 1.82E-07 6.740667934 0.070496474 EEPVAIES(ph)PGQDLLGESR ddPTM_A459_MK2206_30min_R2 1 EEPVAIESPGQDLLGESR 18 0 Q96RG2-4;Q96RG2;Q96RG2-2 Q96RG2-4 PASK PAS domain-containing serine/threonine-protein kinase 1 EEPVAIES(1)PGQDLLGESR 101.67 0.0040966 0 4336 5129.9 3746.2 4474.6 5350 5243 7209.4 4990.6 4140.9 5953.6 TRUE FALSE 4667.967494 4875.156626 3871.096438 4109.010866 5139.932118 5442.526039 6262.79712 5642.888555 4501.067997 5759.33452 0.810504665 0.846479156 0.67214301 0.713452371 0.892452435 0.944992172 1.087416801 0.979781351 0.78152571 1 12.49168641 -6.473656088 3.422673537 0.963813433 0.76127664 0.551137333 0.084172202 0.197170135 4.648939667 0.029614564 0.032524412 3.36E-07 6.473656088 -0.202536793 EEPVIVT(ph)PPTK ddPTM_A459_MK2206_30min_R1 1 EEPVIVTPPTK 11 0 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 EEPVIVT(0.5)PPT(0.5)K 114.24 0.01045 0 2903.3 3119.9 2883.2 2098.2 2330.8 2591.8 3081.2 2366.6 2542.8 3644.4 TRUE FALSE 2656.359089 2916.793943 2687.496417 2259.803728 2237.9593 2738.545476 2875.65877 2345.909066 2807.133159 4095.895786 0.648541669 0.712126015 0.656143749 0.551723932 0.546390684 0.668607215 0.702082992 0.572746278 0.685352681 1 11.99996329 -8.562528387 19.7338502 1.000000001 0.633445638 0.796052431 0.055518046 476.2137737 237014.5838 0.057931389 0.01495782 2.74E-09 8.562528387 -0.366554363 EEPVIVT(ph)PPTK ddPTM_A459_MK2206_30min_R2 1 EEPVIVTPPTK 11 0 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 EEPVIVT(0.771)PPT(0.229)K 109.44 0.021969 3972400 59795 39507 39639 39595 42182 40220 54547 37295 32730 50612 TRUE FALSE 64372.95117 37545.13983 40960.54448 36359.96184 40525.72273 41750.60028 47384.91338 42169.58455 35576.79624 48960.53458 1.314792653 0.766844973 0.836603293 0.742638171 0.827722227 0.852739878 0.967818546 0.86129747 0.726642316 1 15.57933169 -4.756162338 24.99999304 0.83861687 1.314793397 0.740051474 0.083949792 83.38254132 394981.8854 0.020700972 0.171985928 1.75E-05 4.756162338 0.476176527 EEPVLT(ph)LVDEAIVK ddPTM_A459_MK2206_30min_R1 2 EEPVLTLVDEAIVK 14 0 Q02156 Q02156 PRKCE Protein kinase C epsilon type 1 EEPVLT(1)LVDEAIVK;EEPVLT(1)LVDEAIVK 143.93 0.0012488 1562800 565.9 345.44 647.46 510.01 435.08 310.437 524.73 314.61 442.41 326.62 TRUE FALSE 517.7672333 322.9517932 603.5122191 549.2910586 417.7498423 328.0136747 489.7262191 311.8593979 488.4001027 367.0841515 1.410486482 0.87977591 1.644070486 1.496362772 1.138022006 0.89356534 1.334097964 0.849558328 1.330485396 1 8.519967018 -6.438814465 7.119662399 1.080190103 1.34251136 0.236969343 0.235587753 0.419529374 30.76762683 0.072712632 0.082262744 3.64E-07 6.438814465 0.262321256 EEPVLT(ph)LVDEAIVK ddPTM_A459_MK2206_30min_R2 1 EEPVLTLVDEAIVK 14 0 Q02156 Q02156 PRKCE Protein kinase C epsilon type 1 EEPVLT(1)LVDEAIVK 151.38 0.00022808 0 5140.2 8356.3 9699.1 5641.5 10758 8476.8 5669.7 5808.4 4132.3 5848.7 TRUE FALSE 5533.737664 7941.338293 10022.46315 5180.571404 10335.58687 8799.390564 4925.261579 6567.577823 4491.719985 5657.857398 0.978062414 1.403594636 1.771423783 0.915641919 1.826766943 1.555251387 0.870517094 1.160788857 0.793890632 1 12.4660401 -7.264120174 24.95785387 0.969698204 1.421347755 0.369152186 0.28906447 262.6569168 2445281.707 0.115764686 0.082051627 5.44E-08 7.264120174 0.451649551 EEPVS(ph)SGPEEAVGK ddPTM_A459_MK2206_30min_R1 3 EEPVSSGPEEAVGK 14 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EEPVS(0.5)S(0.5)GPEEAVGK;EEPVS(0.916)S(0.084)GPEEAVGK;EEPVS(0.5)S(0.5)GPEEAVGK 198.48 8.95E-05 515471000 14647.4 16334.9 16610.4 12764.8 13415.9 12782.5 13073.7 13754 14760.8 12758.9 TRUE FALSE 13401.56171 15271.49504 15482.93233 13747.94711 12881.51629 13506.2341 12201.57733 13633.75023 16295.23798 14339.56886 0.934586099 1.064989833 1.079734857 0.958742013 0.898319637 0.941885648 0.850902663 0.950778253 1.136382701 1 13.80771403 -2.145358847 18.59741708 0.977619945 0.224550789 0 0.083856392 0 0 0.0203228 0 0.007155519 2.145358847 -0.753069156 EEPVS(ph)SGPEEAVGK ddPTM_A459_MK2206_30min_R2 1 EEPVSSGPEEAVGK 14 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EEPVS(0.5)S(0.5)GPEEAVGK 195.94 0.00012254 232210000 52308 57257 55855 59736 53396 46900 67555 49094 45259 60692 TRUE FALSE 56312.7407 54413.70064 57717.17782 54855.37771 51299.40475 48684.81236 58684.94735 55510.75436 49195.54601 58711.62501 0.959141238 0.926796024 0.983062176 0.934318846 0.873752085 0.829219296 0.999545615 0.945481484 0.837918317 1 15.84135857 -6.002815289 24.68176669 0.910912168 0.954264619 0.098148407 0.05654898 232.753448 2040613.273 0.016220784 0.02354771 9.94E-07 6.002815289 0.043352451 EEPVSS(ph)GPEEAVGK ddPTM_A459_MK2206_30min_R1 1 EEPVSSGPEEAVGK 14 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EEPVS(0.06)S(0.94)GPEEAVGK 245.55 1.91E-20 18502000 3798.8 3969.1 4468.6 3826.8 3769.5 3777.8 4648.3 4188.9 4203 3710.4 TRUE FALSE 3475.692112 3710.710869 4165.283882 4121.540799 3619.352833 3991.695771 4338.220388 4152.276889 4639.916891 4170.072364 0.833484843 0.88984328 0.998851703 0.988361937 0.867935258 0.957224581 1.040322567 0.995732574 1.112670593 1 12.0258567 -7.152490483 3.635584679 1.037330168 0.922114016 0.510952098 0.055792193 0.227561575 5.485883884 0.023700053 0.017841844 7.04E-08 7.152490483 -0.115216152 EEPVSS(ph)GPEEAVGK ddPTM_A459_MK2206_30min_R2 2 EEPVSSGPEEAVGK 14 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EEPVS(0.033)S(0.967)GPEEAVGK;EEPVS(0.032)S(0.968)GPEEAVGK 153 0.00037177 82936000 106493 125865 118929 124679 121800 103781 134443 117646 105000 132119 TRUE FALSE 114646.186 119614.7271 122894.0335 114492.3269 117017.52 107730.4587 116790.4726 133022.7361 114132.7102 127807.9679 0.897019082 0.935894132 0.961552207 0.895815252 0.915572964 0.842908783 0.913796491 1.04080159 0.893001525 1 16.96361825 -7.566690017 24.98416389 0.975600914 0.908826104 0.33478467 0.044588254 161.8182973 92278.01593 0.020623201 0.01190682 2.71E-08 7.566690017 -0.06677481 EEPWVDPNS(ph)PVLLEDPVLCALAK ddPTM_A459_MK2206_30min_R2 2 EEPWVDPNSPVLLEDPVLCALAK 23 0 P52895;B4DK69;H0Y804;Q04828 P52895;Q04828 AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 1 EEPWVDPNS(1)PVLLEDPVLCALAK;EEPWVDPNS(1)PVLLEDPVLCALAK 135.75 1.52E-06 1941900 3103.6 4656.3 4273.3 4271.8 1757.37 3080.54 1596.76 1977.53 1317.33 4962.6 TRUE FALSE 3341.214002 4425.074913 4415.769689 3922.780275 1688.366824 3197.772108 1387.103494 2235.999961 1431.908982 4800.670768 0.695988991 0.921761797 0.919823479 0.817131702 0.351693941 0.666109438 0.288939517 0.465768237 0.29827269 1 12.22902028 -6.19057928 6.65679526 0.482063762 0.853514796 0.370872693 0.206212826 0.231763179 18.15915206 0.057272177 0.074092486 6.45E-07 6.19057928 0.371451034 EEQSQITSQVT(ph)GQIGWR ddPTM_A459_MK2206_30min_R1 1 EEQSQITSQVTGQIGWR 17 0 A0A087WY71;E9PFW3;Q96CW1-2;Q96CW1 A0A087WY71 AP2M1 AP-2 complex subunit mu 1 EEQS(0.007)QIT(0.016)S(0.167)QVT(0.809)GQIGWR 157.88 9.11E-05 4453200 360.04 437.19 579.43 342.86 743.53 402.16 635.65 562.66 375.37 253.38 TRUE FALSE 329.4167074 408.7288515 540.099906 369.2671366 713.9136256 424.9299517 593.2469483 557.7407229 414.3910548 284.7706273 1.156779091 1.435291467 1.896613815 1.296717783 2.506977747 1.49218322 2.083244869 1.958561275 1.45517485 1 8.153656537 -4.990546422 2.727782023 1.765403716 1.142777868 0.144396235 0.410855915 0.503778863 6.724969227 0.10103725 0.575137683 1.02E-05 4.990546422 -0.622625848 EEQSQITSQVT(ph)GQIGWR ddPTM_A459_MK2206_30min_R2 1 EEQSQITSQVTGQIGWR 17 0 A0A087WY71;E9PFW3;Q96CW1-2;Q96CW1 A0A087WY71 AP2M1 AP-2 complex subunit mu 1 EEQSQIT(0.071)S(0.071)QVT(0.858)GQIGWR 119.96 0.0034731 3799600 4906.9 6243.3 6018.1 5356.9 9628.9 7711.2 7495.9 6033.6 5990 4506 TRUE FALSE 5282.576037 5933.266801 6218.74045 4919.224134 9250.821005 8004.655119 6511.679326 6822.212236 6510.999373 4358.969589 1.211886417 1.361162697 1.426653782 1.128529125 2.122249494 1.836364066 1.49385748 1.565097461 1.493701491 1 12.08977142 EEQTDTS(ph)DGESVTHHIR ddPTM_A459_MK2206_30min_R1 1 EEQTDTSDGESVTHHIR 17 0 A2AB27;P36915 A2AB27 GNL1 Guanine nucleotide-binding protein-like 1 1 EEQTDT(0.02)S(0.979)DGESVTHHIR 128.4 0.00067336 4987600 1891.2 1054.2 1289.8 1199.8 1665.3 1698.9 1767.4 1338 1040.2 862.96 TRUE FALSE 1730.343509 985.5713884 1202.25197 1292.208804 1598.967575 1795.09025 1649.499971 1326.302007 1148.332512 969.8699998 1.784098394 1.016189168 1.239601153 1.332352588 1.648641132 1.850856558 1.700743369 1.367504931 1.184006632 1 9.921647573 -8.336159675 2.400369472 1.017337651 1.492735617 0.316893516 0.246133869 0.390163493 4.259484744 0.256655296 0.072006191 4.61E-09 8.336159675 0.475397967 EEQTDTS(ph)DGESVTHHIR ddPTM_A459_MK2206_30min_R2 2 EEQTDTSDGESVTHHIR 17 0 A2AB27;P36915 A2AB27 GNL1 Guanine nucleotide-binding protein-like 1 1 EEQT(0.013)DT(0.033)S(0.954)DGESVTHHIR;EEQT(0.13)DT(0.203)S(0.666)DGES(0.001)VTHHIR 141.08 0.00033224 41367000 75135 106206 92083 138734 117798 166205 135881 105835 116692 115307 TRUE FALSE 80887.39337 100931.9645 95153.00126 127398.9884 113172.6586 172530.0477 118039.6615 119667.9979 126841.6592 111544.542 0.725157788 0.90485794 0.85304937 1.142135564 1.014596112 1.546736798 1.058228931 1.072827013 1.137139092 1 16.7672604 -5.720409693 1.935749643 1.158930345 0.806205985 0.459163633 0.152914346 0.302773313 2.306549139 0.046978882 0.098218962 1.90E-06 5.720409693 -0.35272436 EERS(ph)PQTLAPVGEDAMK ddPTM_A459_MK2206_30min_R1 5 EERSPQTLAPVGEDAMK 17 1 Q92797 Q92797 SYMPK Symplekin 1 EERS(0.996)PQT(0.004)LAPVGEDAMK;EERS(0.5)PQT(0.5)LAPVGEDAMK;EERS(0.984)PQT(0.016)LAPVGEDAMK;EERS(0.5)PQT(0.5)LAPVGEDAMK;EERS(0.998)PQT(0.002)LAPVGEDAMK 193.72 2.82E-07 84453200 14415.9 15687.9 16458.9 12746 13063 12616.3 15199 13395.3 16853.5 14856.9 TRUE FALSE 13189.752 14666.61486 15341.71573 13727.69913 12542.67305 13330.624 14185.10244 13278.1863 18605.48164 16697.48494 0.789924474 0.878372696 0.918803987 0.822141729 0.751171395 0.798361194 0.849535274 0.795220739 1.114268509 1 14.02734319 -8.257681954 24.99861125 1.057134266 0.827632687 0.760069319 0.052058505 147.8070732 983395.3317 0.040355125 0.013934438 5.52E-09 8.257681954 -0.229501579 EERS(ph)PQTLAPVGEDAMK ddPTM_A459_MK2206_30min_R2 4 EERSPQTLAPVGEDAMK 17 1 Q92797 Q92797 SYMPK Symplekin 1 EERS(0.999)PQT(0.001)LAPVGEDAMK;EERS(1)PQTLAPVGEDAMK;EERS(0.993)PQT(0.007)LAPVGEDAMK;EERS(0.999)PQT(0.001)LAPVGEDAMK 138.81 0.00027937 120889400 291219 300565 293046 316087 308581 246988 342559 252880 253635 303404 TRUE FALSE 313514.9505 285639.3792 302816.0074 290261.681 296464.5594 256387.3014 297580.5918 285932.2843 275695.7138 293503.9523 1.068179655 0.973204541 1.031727188 0.988953228 1.010087112 0.873539519 1.013889556 0.974202501 0.939325388 1 18.16302041 -6.580599883 24.9999975 0.959699368 1.011887238 0.287017801 0.042654961 107.9105058 46736.91226 0.013456236 0.013456238 2.63E-07 6.580599883 0.05218787 EES(ph)DGEYDEFGR ddPTM_A459_MK2206_30min_R1 1 EESDGEYDEFGR 12 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EES(1)DGEYDEFGR 184.96 0.00010448 3420100 1028.5 1102.7 1145 800.13 983.54 700.2 1148.7 717.62 1058.1 1342 TRUE FALSE 941.0206741 1030.91403 1067.28059 861.7561512 944.3635191 739.8447189 1072.072319 711.345924 1168.093281 1508.257092 0.623912647 0.683513464 0.70762511 0.571358926 0.62612901 0.490529581 0.710802107 0.471634397 0.774465632 1 10.55866665 -8.544109224 7.090775246 0.999986171 0.615149424 0.70885556 0.077866403 0.112516347 33.27831604 0.072445087 0.018741438 2.86E-09 8.544109224 -0.384836747 EES(ph)DGEYDEFGR ddPTM_A459_MK2206_30min_R2 5 EESDGEYDEFGR 12 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EES(1)DGEYDEFGR;EES(1)DGEYDEFGR;EES(1)DGEYDEFGR;EES(1)DGEYDEFGR;EES(1)DGEYDEFGR 246.51 3.45E-18 85235000 146773 108179 125607 113364.8 104619.4 86635.6 118030.7 92612.4 84651.4 128073.5 TRUE FALSE 158010.0537 102806.9882 129794.6747 104102.5332 100511.5167 89932.57847 102533.1273 104717.1587 92014.22576 123894.4722 1.275359997 0.829794795 1.047622807 0.840251638 0.811267161 0.725880476 0.827584359 0.845212517 0.742682253 1 16.91875229 -1.617222166 0.922844207 0.825563889 200 0.599763173 0.100444187 558.2618969 1.343639321 0.031690184 234100.514 0.024142255 1.617222166 199.1744361 EES(ph)DGEYDEFGRK ddPTM_A459_MK2206_30min_R1 2 EESDGEYDEFGRK 13 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EES(1)DGEYDEFGRK;EES(1)DGEYDEFGRK 95.854 0.0075254 27347000 7186.8 8576.3 7781.6 5894.6 5275.1 5279.7 7615.2 6465.1 10855 13185.4 TRUE FALSE 6575.524921 8017.981311 7253.406673 6348.603113 5064.981597 5578.632051 7107.203903 6408.576312 11983.41609 14818.9069 0.443725368 0.541064288 0.489469751 0.428412376 0.34179185 0.376453681 0.479603789 0.432459449 0.808657223 1 13.85515141 -8.405890184 2.81853525 0.99680443 0.439776291 0.922739375 0.054818895 0.068111412 1.048913218 0.059078771 0.016021054 3.93E-09 8.405890184 -0.557028139 down EES(ph)EEEEDEDDEEEEEEEKEK ddPTM_A459_MK2206_30min_R2 4 EESEEEEDEDDEEEEEEEKEK 21 1 D6R9L5;H0Y8X0;A0A494C198;B4DFG0;H0Y993;P35659;A0A494C028 D6R9L5 DEK Protein DEK 1 EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK 131.64 2.69E-05 892316000 346830 257927 312311 204855 205687 109697 283901 223021 168606 361733 TRUE FALSE 373383.5715 245118.7202 322723.2929 188117.6912 197610.6949 113871.5962 246624.4577 252170.6104 183271.0451 349929.6818 1.067024579 0.700479933 0.92225184 0.537587124 0.564715442 0.325412796 0.704782905 0.72063224 0.523736781 1 18.41670552 -3.466982148 10.73910224 0.685432355 0.86916773 0 0.222413833 0 0 0.051231448 0 0.000341207 3.466982148 0.183735374 EES(ph)EESEAEPVQR ddPTM_A459_MK2206_30min_R1 2 EESEESEAEPVQR 13 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 EES(0.998)EES(0.002)EAEPVQR;EES(0.994)EES(0.006)EAEPVQR 267.77 4.32E-38 20817000 3999 4004 4649.2 4266.7 3379.7 3187.6 4181.1 3695 3846.2 4209.3 TRUE FALSE 3658.86405 3743.338872 4333.625257 4595.321973 3245.079392 3368.079157 3902.186448 3662.695005 4246.026254 4730.779863 0.773416679 0.791273105 0.916048809 0.971366689 0.6859502 0.711950092 0.824850566 0.774226472 0.897531988 1 12.20786231 -8.535334848 3.66394964 0.999704694 0.808702443 0.364477273 0.080968272 0.245580475 9.459638532 0.084832599 0.022329554 2.92E-09 8.535334848 -0.19100225 EES(ph)EESEAEPVQR ddPTM_A459_MK2206_30min_R2 2 EESEESEAEPVQR 13 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 EES(1)EESEAEPVQR;EES(1)EESEAEPVQR 175.6 9.89E-05 38592000 14950.1 13545.6 13603.2 16189.8 14529.5 11714.3 15855.3 12832.6 14468.5 15353.9 TRUE FALSE 16094.69115 12872.9452 14056.7239 14867.04155 13958.99883 12160.0959 13773.48006 14509.86488 15726.94398 14852.9035 1.083605717 0.866695539 0.946395693 1.000951871 0.939816166 0.818701602 0.927325763 0.976904272 1.058846439 1 13.85845736 -8.013675505 4.15658879 1.028273304 0.935959592 0.209461325 0.068240248 0.316858817 12.66648366 0.046462002 0.018069554 9.69E-09 8.013675505 -0.092313712 EES(ph)EPEVKEDVIEK ddPTM_A459_MK2206_30min_R1 1 EESEPEVKEDVIEK 14 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 EES(1)EPEVKEDVIEK 87.088 0.012376 4103400 1552.8 1534.6 1563.9 1364.2 980.83 892.44 1408.6 1114.9 1838.3 1700.2 TRUE FALSE 1420.726206 1434.697261 1457.746825 1469.27092 941.7614642 942.9691816 1314.634864 1105.152547 2029.397863 1910.833612 0.743511207 0.750822705 0.762885275 0.7689162 0.492853725 0.493485762 0.687990234 0.578361475 1.062048444 1 10.89998644 -8.266185274 24.99875554 1.031024283 0.659781119 0.682150612 0.101345484 267.3256241 1408098.145 0.097613742 0.02842096 5.42E-09 8.266185274 -0.371243164 EES(ph)EPEVKEDVIEK ddPTM_A459_MK2206_30min_R2 2 EESEPEVKEDVIEK 14 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 EES(1)EPEVKEDVIEK;EES(1)EPEVKEDVIEK 103.6 0.0037234 6119400 44506 43550 41003 42042 44210 28093.3 45697 32125.6 31514.8 42213 TRUE FALSE 47913.41358 41387.37033 42370.01956 38607.03411 42474.09326 29162.41022 39696.92901 36324.52622 34255.90034 40835.59327 1.173324782 1.01351216 1.037575707 0.945426062 1.04012431 0.71414195 0.972115888 0.889531003 0.838873581 1 15.31753957 -4.663799445 0.584823181 0.889762913 1.353633653 0.460244005 0.087790871 3.781297232 0.890241146 0.044354785 1.226472898 2.17E-05 4.663799445 0.46387074 EES(ph)PLR ddPTM_A459_MK2206_30min_R1 1 EESPLR 6 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 EES(1)PLR 127.46 0.025487 17621000 22769 23288 18501 15670 13488 13153 24223 19742 3335.5 20858 TRUE FALSE 20832.37699 21771.94697 17245.20367 16876.90612 12950.7444 13897.71149 22607.12787 19569.39778 3682.237161 23442.04651 0.888675695 0.92875624 0.735652651 0.71994167 0.552457926 0.592854019 0.964383714 0.834799034 0.157078315 1 14.5168109 -5.376929489 3.020903273 0.6849335 0.912002213 0.128042514 0.22520461 0.535714914 9.210291804 0.060853709 0.151734387 4.20E-06 5.376929489 0.227068713 EES(ph)WESGR ddPTM_A459_MK2206_30min_R2 2 EESWESGR 8 0 B8ZZ08;Q9NQ29-3;Q9NQ29 B8ZZ08 LUC7L Putative RNA-binding protein Luc7-like 1 1 EES(0.999)WES(0.001)GR;EES(1)WESGR 145.46 0.001989 46002000 120546 141102 157011 156521 169103 147738 150970 135447 111287 140055 TRUE FALSE 129775.0944 134095.0799 162245.6684 143732.7336 162463.1665 153360.2731 131147.4577 153150.388 120966.5421 135485.0168 0.957855691 0.989741028 1.197517424 1.06087549 1.199122754 1.1319353 0.967984953 1.13038616 0.892840736 1 17.04777379 -7.260492991 24.99949359 1.008668475 1.093563626 0.189934219 0.091458926 168.0650523 4439652.045 0.037283115 0.027146425 5.49E-08 7.260492991 0.08489515 EES(ph)WGPPR ddPTM_A459_MK2206_30min_R1 2 EESWGPPR 8 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 EES(1)WGPPR;EES(1)WGPPR 123.35 0.0059526 12802300 4991.9 4461 4784.1 4302.7 5263.9 4570.4 5590.3 5248 4502.7 5011 TRUE FALSE 4567.312691 4170.588089 4459.368621 4634.0947 5054.227717 4829.172098 5217.381287 5202.117289 4970.771778 5631.800511 0.810986235 0.740542582 0.79181935 0.822844256 0.89744438 0.857482805 0.926414435 0.923704112 0.882625684 1 12.45938052 -5.943116116 0.23462459 1.003067724 0.651244397 0.804852231 0.031977982 2.60989001 0.209009295 0.060673728 0.269453569 1.14E-06 5.943116116 -0.351823327 EES(ph)WGPPR ddPTM_A459_MK2206_30min_R2 1 EESWGPPR 8 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 EES(1)WGPPR 99.013 0.018995 6231000 38243 39432 35805 37607 46409 43129 41442 30866 39378 39248 TRUE FALSE 41170.91348 37473.86422 36998.72083 34534.3878 44586.74947 44770.30432 36000.61562 34900.29218 42803.02726 37967.34097 1.084377057 0.987002599 0.97448807 0.909581417 1.174344801 1.179179346 0.94819955 0.919218762 1.127364365 1 15.21247134 -4.734078512 22.4392925 1.02384841 1.084378162 0.034145457 0.095698633 3443.197547 2823302.037 0.025218764 1.71402003 1.84E-05 4.734078512 0.060529752 EESDWPAS(ph)GSSSPLRGESAADSDGWDSAPSDLR ddPTM_A459_MK2206_30min_R1 2 EESDWPASGSSSPLRGESAADSDGWDSAPSDLR 33 1 I3L0Y2;I3L4Q4;Q9BUL5-4;Q9BUL5;A0A087WVQ2;Q9BUL5-2 I3L0Y2 PHF23 PHD finger protein 23 1 EES(0.03)DWPAS(0.418)GS(0.168)S(0.168)S(0.168)PLRGES(0.037)AADS(0.009)DGWDSAPSDLR;EES(0.01)DWPAS(0.486)GS(0.161)S(0.161)S(0.161)PLRGES(0.01)AADS(0.007)DGWDS(0.002)APS(0.002)DLR 52.234 0.0026956 8014200 350.94 613.12 588.17 579.25 466.57 568.15 563.45 627.07 736.86 731.37 TRUE FALSE 321.0907101 573.2057766 548.2466591 623.8639354 447.9855289 600.318162 525.8632786 621.5875931 813.4592339 821.9776372 0.390631929 0.6973496 0.666984884 0.758979207 0.545009388 0.730333935 0.639753753 0.756209859 0.989636697 1 9.682955334 -8.139141761 2.275419681 1.011800504 0.64074301 0.675314965 0.099161324 0.182833606 1.687753952 0.085267555 0.026252286 7.26E-09 8.139141761 -0.371057494 EESDWPAS(ph)GSSSPLRGESAADSDGWDSAPSDLR ddPTM_A459_MK2206_30min_R2 1 EESDWPASGSSSPLRGESAADSDGWDSAPSDLR 33 1 I3L0Y2;I3L4Q4;Q9BUL5-4;Q9BUL5;A0A087WVQ2;Q9BUL5-2 I3L0Y2 PHF23 PHD finger protein 23 1 EES(0.009)DWPAS(0.606)GS(0.127)S(0.127)S(0.127)PLRGES(0.002)AADSDGWDSAPSDLR 52.92 0.0018855 2299900 4707.9 5880.4 3071.4 4603.1 7243.4 4058.5 3839.5 5499.3 4457.1 5600.1 TRUE FALSE 5068.340444 5588.387887 3173.798943 4227.012005 6958.987721 4212.949061 3335.369038 6218.077392 4844.770501 5417.369196 0.935572279 1.031568587 0.585856128 0.780270248 1.284569589 0.777674349 0.615680585 1.147803882 0.89430318 1 12.4033767 -7.797704675 24.99928459 1.015789858 0.86513446 0.112775729 0.199022324 449.4003253 309786.0161 0.112372969 0.05398484 1.59E-08 7.797704675 -0.150655398 EESDWPASGSSS(ph)PLR ddPTM_A459_MK2206_30min_R1 1 EESDWPASGSSSPLR 15 0 I3L0Y2;I3L4Q4;Q9BUL5-4;Q9BUL5;A0A087WVQ2;Q9BUL5-2 I3L0Y2 PHF23 PHD finger protein 23 1 EESDWPASGS(0.002)S(0.147)S(0.85)PLR 166.79 7.72E-05 2846100 739.5 886.37 654.94 487.82 611.95 733.3 1540.5 877.99 1224.5 2342.1 TRUE FALSE 676.6016417 828.6671519 610.4844976 525.3919809 587.5747357 774.8188123 1437.736056 870.313826 1351.791157 2632.25703 0.257042391 0.3148124 0.231924349 0.199597522 0.223220882 0.294355302 0.546198961 0.330634059 0.513548313 1 11.36208465 -9.30373862 0.407130446 1.094019497 0.229132901 0.89453888 0.075241255 1.036505836 0.267103442 0.250510284 0.055340338 4.97E-10 9.30373862 -0.864886596 down EESDWPASGSSS(ph)PLR ddPTM_A459_MK2206_30min_R2 2 EESDWPASGSSSPLR 15 0 I3L0Y2;I3L4Q4;Q9BUL5-4;Q9BUL5;A0A087WVQ2;Q9BUL5-2 I3L0Y2 PHF23 PHD finger protein 23 1 EESDWPASGS(0.005)S(0.047)S(0.948)PLR;EESDWPASGS(0.001)S(0.022)S(0.978)PLR 225.29 2.81E-10 9157500 90082 43425 48691 43589 32645 40627 66547 50132 34262 69692 TRUE FALSE 96978.74718 41268.57765 50314.33364 40027.63927 31363.19327 42173.08895 57809.29896 56684.42453 37242.04683 67417.95575 1.438470599 0.612130362 0.746304647 0.593723717 0.465205344 0.625546837 0.857476296 0.840791209 0.55240546 1 16.04084526 -4.757922499 24.98358514 0.687806211 1.438471662 0.672022708 0.154731563 58.96231133 418797.9092 0.03867788 0.275926216 1.75E-05 4.757922499 0.750665451 EESEES(ph)DEDMGFGLFD ddPTM_A459_MK2206_30min_R1 4 EESEESDEDMGFGLFD 16 0 F8VWS0;P05388-2;Q8NHW5;P05388;F8W1K8 F8VWS0 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like 1 EES(0.018)EES(0.982)DEDMGFGLFD;EES(0.002)EES(0.998)DEDMGFGLFD;EES(0.007)EES(0.993)DEDMGFGLFD;EES(0.009)EES(0.991)DEDMGFGLFD 205.96 8.36E-08 2432000 1210.17 1282.42 1417.51 1023.49 1230.19 1166.81 1443.267 1323.32 1135.24 1226.35 TRUE FALSE 1107.238687 1198.934225 1321.293371 1102.319377 1181.188927 1232.873774 1346.989292 1311.750353 1253.25226 1378.279496 0.803348442 0.869877429 0.958654158 0.799779276 0.857002466 0.894502006 0.977297635 0.951730296 0.909287459 1 10.42865276 -7.064389591 3.783095837 0.955121985 0.861435047 0.51642677 0.046286043 0.217825742 6.12044377 0.018658006 0.014607602 8.62E-08 7.064389591 -0.093686938 EESGKPGAHVTVK ddPTM_A459_MK2206_30min_R1 1 EESGKPGAHVTVK 13 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 80.318 0.029717 17991000 14583 9812.9 11717 9310.3 15314 14288 15329 12760 7467.8 9476.5 FALSE TRUE 13342.63927 9174.078426 10921.68269 10027.38092 14704.01095 15096.97421 14306.43038 12648.44067 8244.104534 10650.52036 1.252768768 0.861373728 1.025460007 0.941492113 1.380590849 1.417487005 1.343261164 1.187588985 0.774056502 1 13.3786363 -4.461962667 22.57745013 1.123645682 4.317132721 0.034876216 0.213023713 1911.597706 754744.7238 0.0556617 19876.43816 3.45E-05 4.461962667 3.193487039 EESGKPGAHVTVK ddPTM_A459_MK2206_30min_R2 1 EESGKPGAHVTVK 13 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 77.124 0.034842 15379000 180190 276360 232140 333170 307630 294420 323440 246020 229440 240150 FALSE TRUE 193985.4849 262636.3643 239879.4317 305948.9452 295550.9005 305624.3594 280971.9395 278175.6587 249396.2765 232313.9252 0.835014452 1.130523554 1.032565876 1.316963437 1.272204842 1.31556625 1.209449409 1.197412762 1.073531327 1 17.82571611 -4.194205221 1.115604953 1.20521508 1.64E-08 0.474397073 0.106643062 4.407764864 1.821550196 0.032641234 8.583816245 6.39E-05 4.194205221 -1.205215064 EESHSNDQS(ph)PQIR ddPTM_A459_MK2206_30min_R1 2 EESHSNDQSPQIR 13 0 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 EESHSNDQS(1)PQIR;EESHSNDQS(1)PQIR 142.74 0.00050242 10359100 3951.9 2537.2 2412.3 1924.96 4124.8 3750.8 4457.5 2814.66 2203.38 2902.7 TRUE FALSE 3615.770153 2372.027819 2248.559797 2073.220753 3960.500482 3963.167055 4160.148308 2790.051724 2432.429236 3262.30839 1.108347133 0.727101039 0.689254211 0.635507286 1.214017808 1.214835197 1.275216139 0.855238497 0.74561597 1 11.67167745 -6.260442276 24.99758621 1.063003033 0.77835602 0.299342962 0.194583929 118.4660572 2969966.047 0.06373031 0.077651393 5.49E-07 6.260442276 -0.284647013 EESHSNDQS(ph)PQIR ddPTM_A459_MK2206_30min_R2 2 EESHSNDQSPQIR 13 0 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 EESHSNDQS(1)PQIR;EES(0.001)HSNDQS(0.999)PQIR 184 0.00012206 19229400 29243 29553 29275.2 34999 26594.4 29467.3 38910.1 31682.9 20790.2 32506.5 TRUE FALSE 31481.86656 28085.44099 30251.22056 32139.46974 25550.17023 30588.69875 33801.15713 35823.96381 22598.49402 31445.81557 1.001146448 0.893137624 0.962011002 1.022058712 0.812514154 0.972743057 1.074901589 1.139228326 0.718648685 1 14.94058043 -6.994484302 24.99414136 0.998943496 0.936753427 0.026933725 0.115505366 473.6107845 2146130.954 0.040001942 0.035167319 1.01E-07 6.994484302 -0.062190069 EESLVEELS(ph)PASEK ddPTM_A459_MK2206_30min_R1 1 EESLVEELSPASEK 14 0 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 EESLVEELS(0.999)PAS(0.001)EK 205.27 1.40E-05 1375200 2822.4 2718.6 2165.9 2301.2 3035.8 3138.6 3527 2158.9 3001.8 3091.6 TRUE FALSE 2582.340059 2541.618646 2018.884743 2478.438823 2914.877658 3316.30482 3291.720265 2140.024965 3313.847852 3474.610748 0.743202691 0.731482986 0.581039112 0.713299705 0.838907685 0.954439234 0.947363749 0.615903513 0.953732113 1 11.76263565 -6.276155835 3.750358392 0.8750617 0.684407663 0.433910967 0.108343423 0.241864589 7.608370851 0.034678936 0.04218157 5.29E-07 6.276155835 -0.190654037 EESLVEELS(ph)PASEK ddPTM_A459_MK2206_30min_R2 1 EESLVEELSPASEK 14 0 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 EESLVEELS(0.979)PAS(0.021)EK 139.6 0.00057298 0 10072 8139.3 8328 7187.2 7319.3 6679.8 10798 7383.4 7909.1 8462.5 TRUE FALSE 10843.12006 7735.114198 8605.651363 6599.982769 7031.907505 6934.00447 9380.209629 8348.435731 8597.019222 8186.369318 1.324533458 0.944877258 1.051217094 0.806216103 0.858977556 0.847018281 1.145832696 1.019797105 1.050162641 1 12.99900804 -4.759423566 24.99097648 0.965667327 1.324533917 0.525671209 0.101165105 45.64352944 565719.6472 0.027135778 0.172475809 1.74E-05 4.759423566 0.35886659 EESREPAPAS(ph)PAPAGVEIR ddPTM_A459_MK2206_30min_R1 3 EESREPAPASPAPAGVEIR 19 1 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 EES(0.001)REPAPAS(0.999)PAPAGVEIR;EESREPAPAS(1)PAPAGVEIR;EES(0.001)REPAPAS(0.999)PAPAGVEIR 138.28 0.00070708 108901000 7090.1 6585.7 6499.4 5388.9 6768.6 5528 5827 5146.3 5100.2 4736.6 TRUE FALSE 6487.049763 6156.969733 6058.238836 5803.954012 6498.992329 5840.990583 5438.291462 5101.306442 5630.384041 5323.405768 1.218590137 1.156584713 1.138038147 1.090270828 1.220833544 1.097228135 1.021581239 0.958278716 1.057665766 1 12.37813382 -7.133898649 3.057035681 1.004538559 1.158920462 0.744475548 0.042675972 0.134898851 2.398786435 0.017689238 0.013218695 7.35E-08 7.133898649 0.154381903 EESREPAPAS(ph)PAPAGVEIR ddPTM_A459_MK2206_30min_R2 4 EESREPAPASPAPAGVEIR 19 1 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 EES(0.006)REPAPAS(0.994)PAPAGVEIR;EES(0.002)REPAPAS(0.998)PAPAGVEIR;EES(0.003)REPAPAS(0.997)PAPAGVEIR;EES(0.002)REPAPAS(0.998)PAPAGVEIR 133.98 0.00025936 163541000 180098.9 230061.1 190500.8 191642.9 192307.7 180573.1 149803.6 121360.8 155554.3 150852.5 TRUE FALSE 193887.4103 218636.6003 196852.0016 175985.062 184756.7334 187444.9359 130134.2074 137223.0733 169084.1318 145930.1953 1.328631199 1.498227285 1.348946332 1.205953721 1.266062401 1.284483554 0.891756549 0.940333651 1.158664466 1 17.15491891 EESS(ph)EDENEVSNILR ddPTM_A459_MK2206_30min_R2 1 EESSEDENEVSNILR 15 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 EES(0.003)S(0.997)EDENEVSNILR 236.03 1.65E-15 4479200 10891 12734 14038 11132 12708 14988 13027 10746 11927 11225 TRUE FALSE 11724.82333 12101.64808 14506.01991 10222.47999 12209.02007 15558.37884 11316.53925 12150.5391 12964.3889 10858.72917 1.079760177 1.114462649 1.335885598 0.941406663 1.12435073 1.432799235 1.042160558 1.118965112 1.193914011 1 13.40656765 -10.73459946 3.835972072 0.999864268 1.154739551 0.106025868 0.133902238 31751410.44 10.93853498 41077.90104 0.03206964 1.84E-11 10.73459946 0.154875283 EESYS(ph)PSKDR ddPTM_A459_MK2206_30min_R1 1 EESYSPSKDR 10 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 EES(0.031)YS(0.938)PS(0.031)KDR 130.1 0.013465 50422000 2547.4 2567.1 2397.7 2047.7 1931.9 1815.9 2429.1 1855.4 2019.6 1893.9 TRUE FALSE 2330.730253 2399.981323 2234.950804 2205.414209 1854.948332 1918.714689 2267.059171 1839.178433 2229.544647 2128.53063 1.094994932 1.127529616 1.049997013 1.036120494 0.87146894 0.901426863 1.06508177 0.864060121 1.047457159 1 11.05564214 -5.83310882 2.318174291 0.954619683 1.103462141 0.442919853 0.066740807 0.253840135 2.78053178 0.019597252 0.034462987 1.47E-06 5.83310882 0.148842458 EESYS(ph)PSKDR ddPTM_A459_MK2206_30min_R2 1 EESYSPSKDR 10 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 EES(0.125)YS(0.875)PSKDR 135.1 0.0095043 33023000 32077 28276 29658 28188 27432 23237 31805 27267 21190 31772 TRUE FALSE 34532.83978 26871.85496 30646.78292 25884.95023 26354.88185 24121.30032 27628.9653 30830.89052 23033.0679 30735.28224 1.123556944 0.874299925 0.997120595 0.842190094 0.857479741 0.78480816 0.898933189 1.003110701 0.749401542 1 14.90760811 -2.298165101 1.31499161 0.881750293 200 0.390695916 0.085539911 1283.978594 3.545676015 0.02441393 769740.3053 0.005033092 2.298165101 199.1182497 EET(ph)YDVPPAFAK ddPTM_A459_MK2206_30min_R1 1 EETYDVPPAFAK 12 0 P56945-6;A0A2R8Y6M6;A0A2R8Y5C9;A0A2R8Y8C4;A0A2R8YFS8;A0A2R8Y5E4;A0A2R8Y4C2;A0A2R8YFK2;A0A2R8Y596;P56945;P56945-8;P56945-2;P56945-3;P56945-5;P56945-7;P56945-4;H3BN62 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 EET(0.968)Y(0.032)DVPPAFAK 210.15 1.48E-05 5572500 2632.3 2874.2 2669.4 2069 2664.8 1992.6 3199.6 2026.1 2065.6 2461.6 TRUE FALSE 2408.409062 2687.089058 2488.208565 2228.354738 2558.655373 2105.41929 2986.160522 2008.386021 2280.326512 2766.561592 0.870542362 0.971273897 0.899386651 0.805460014 0.92485032 0.761023827 1.079376122 0.725950229 0.824245706 1 11.43387833 -5.526955779 24.89180387 0.867644838 0.924513674 0.028873154 0.103882507 345.317068 2108282.079 0.026859759 0.046771906 2.97E-06 5.526955779 0.056868836 EETNGPSNQKPVKS(ph)PDNSIK ddPTM_A459_MK2206_30min_R2 1 EETNGPSNQKPVKSPDNSIK 20 2 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 EETNGPSNQKPVKS(0.872)PDNS(0.128)IK 63.436 0.0079309 15845000 156360 116070 125740 111070 101190 63537 153100 110660 70691 151140 TRUE FALSE 168331.0418 110306.1326 129932.1088 101995.2257 97216.77216 65954.94506 132997.7861 125123.642 76839.5754 146208.3142 1.151309642 0.754445007 0.888677977 0.697602091 0.664919589 0.451102562 0.909645849 0.855790197 0.525548604 1 17.15766583 -2.225661953 1.166243019 0.727293217 199.9979233 0.340616623 0.165074372 819.0393499 3.141660242 0.048978502 434225.9639 0.005947549 2.225661953 199.2706301 EETPGT(ph)PK ddPTM_A459_MK2206_30min_R2 1 EETPGTPK 8 0 Q99442 Q99442 SEC62 Translocation protein SEC62 1 EET(0.285)PGT(0.715)PK 97.597 0.047101 14968000 469500 135400 160070 142170 130710 154120 368580 157290 165270 223870 TRUE FALSE 505445.281 128676.2329 165406.6539 130554.2562 125577.6686 159985.1446 320185.0033 177848.3431 179644.8859 216565.1402 2.333918009 0.594168723 0.763773217 0.602840587 0.579860953 0.738739136 1.478469725 0.821223318 0.829518941 1 17.72444151 -4.756242313 24.99998019 0.819084047 2.333920364 0.764780191 0.251341299 83.10562272 399727.4119 0.066920363 0.552211833 1.75E-05 4.756242313 1.514836316 EETY(ph)DVPPAFAK ddPTM_A459_MK2206_30min_R1 1 EETYDVPPAFAK 12 0 P56945-6;A0A2R8Y6M6;A0A2R8Y5C9;A0A2R8Y8C4;A0A2R8YFS8;A0A2R8Y5E4;A0A2R8Y4C2;A0A2R8YFK2;A0A2R8Y596;P56945;P56945-8;P56945-2;P56945-3;P56945-5;P56945-7;P56945-4;H3BN62 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 EET(0.017)Y(0.983)DVPPAFAK 201.84 0.0010191 5577500 3282.4 3752.8 2909.1 2733.4 2537.5 2278.9 3550.4 2731.1 2826.2 2953.9 TRUE FALSE 3003.214643 3508.492038 2711.638397 2943.926942 2436.426002 2407.929349 3313.559294 2707.222281 3119.993604 3319.851433 0.904623205 1.056822002 0.816795104 0.886764664 0.733896095 0.725312381 0.998104693 0.815464889 0.939799165 1 11.69690297 -10.63216219 14.95615403 0.999999588 0.87252666 0.119386649 0.101363526 0 0 0.101638895 0.024651053 2.33E-11 10.63216219 -0.127472928 EETY(ph)DVPPAFAK ddPTM_A459_MK2206_30min_R2 2 EETYDVPPAFAK 12 0 P56945-6;A0A2R8Y6M6;A0A2R8Y5C9;A0A2R8Y8C4;A0A2R8YFS8;A0A2R8Y5E4;A0A2R8Y4C2;A0A2R8YFK2;A0A2R8Y596;P56945;P56945-8;P56945-2;P56945-3;P56945-5;P56945-7;P56945-4;H3BN62 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 EET(0.252)Y(0.748)DVPPAFAK;EET(0.374)Y(0.626)DVPPAFAK 147.75 0.01767 0 41545 36447 38332 38578 40593 32036 35114 22943 29826 39795 TRUE FALSE 44725.71714 34637.09498 39609.96975 35426.054 38999.11486 33255.15243 30503.48962 25941.72888 32420.21157 38496.49241 1.161812787 0.899746777 1.028924124 0.920241086 1.013056318 0.863848895 0.792370622 0.673872534 0.842160143 1 15.23243938 -6.90265327 3.282608356 0.801620274 0.996184546 0.408106958 0.100865326 0.223731972 4.790482888 0.036433792 0.031484557 1.25E-07 6.90265327 0.194564272 EEVGAGYNS(ph)EDEYEAAAAR ddPTM_A459_MK2206_30min_R2 2 EEVGAGYNSEDEYEAAAAR 19 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 EEVGAGYNS(1)EDEYEAAAAR;EEVGAGYNS(1)EDEYEAAAAR 228.65 1.49E-23 18499700 69251 60756 66373 54794 51774 54427 60028 44495 54728 61871 TRUE FALSE 74552.9098 57738.94539 68585.84269 50317.15492 49741.09262 56498.25762 52146.25149 50310.64927 59488.14251 59852.15434 1.245617817 0.964692851 1.145921036 0.84069079 0.831066035 0.943963643 0.871251036 0.840582095 0.99391815 1 15.86911556 -5.759691778 24.99884602 0.893803244 1.103338826 0.561718301 0.086714531 32.71272992 467927.7723 0.022669742 0.036814285 1.74E-06 5.759691778 0.209535582 EEVILS(ph)PVPSVLK ddPTM_A459_MK2206_30min_R1 1 EEVILSPVPSVLK 13 0 Q4G0A6 Q4G0A6 FAM188B Protein FAM188B 1 EEVILS(0.717)PVPS(0.283)VLK 128.9 0.0017502 0 1030.1 822.65 978.74 524.21 1009.6 841.97 775.71 711.89 825.07 1256.3 TRUE FALSE 942.4845857 769.0953355 912.3058557 564.584745 969.3854941 889.6416138 723.9638013 705.6660208 910.838979 1411.939929 0.667510399 0.544708256 0.646136452 0.399864565 0.686562845 0.630084606 0.512744053 0.499784733 0.645097543 1 10.46346299 -8.569329554 14.86358162 1.000000002 0.572723387 0.698012381 0.083789245 37.27780424 11928.98532 0.078796955 0.020345554 2.70E-09 8.569329554 -0.427276615 EEVILS(ph)PVPSVLK ddPTM_A459_MK2206_30min_R2 2 EEVILSPVPSVLK 13 0 Q4G0A6 Q4G0A6 FAM188B Protein FAM188B 1 EEVILS(0.883)PVPS(0.117)VLK;EEVILS(0.877)PVPS(0.123)VLK 146.96 0.00058622 2713200 48262 34190 32933 32338 26049 25535 31782 21596.5 20080.1 30428 TRUE FALSE 51956.97583 32492.17432 34030.96978 29695.88196 25026.18537 26506.75232 27608.98522 24419.2367 21826.6308 29435.13685 1.765134509 1.103856744 1.156134247 1.008858294 0.850214677 0.900513983 0.937960145 0.829594808 0.741516199 1 14.84525171 -1.522878745 0.693069676 0.874431278 102.4832437 0.882176992 0.093631896 84.61792559 0.461992228 0.036692195 13307.15153 0.03 1.522878745 101.6088124 EEVVGGDDS(ph)DGLR ddPTM_A459_MK2206_30min_R2 2 EEVVGGDDSDGLR 13 0 P25490 P25490 YY1 Transcriptional repressor protein YY1 1 EEVVGGDDS(1)DGLR;EEVVGGDDS(1)DGLR 171.11 0.00021036 27338000 73145 55886 50578 59410 46455 47619 57133 41682 41607 54581 TRUE FALSE 78745.03744 53110.78251 52264.24528 54556.01296 44630.94328 49431.17441 49631.36847 47129.98052 45225.90165 52800.02644 1.491382538 1.005885529 0.989852635 1.033257304 0.845282593 0.936196016 0.939987569 0.89261282 0.856550739 1 15.68825103 -2.350062834 1.171208247 0.92390155 199.9999681 0.887737045 0.058650417 160.773136 0.839379547 0.017495166 85277.02804 0.00446619 2.350062834 199.0760665 EEVVTVETWQEGS(ph)LK ddPTM_A459_MK2206_30min_R1 1 EEVVTVETWQEGSLK 15 0 P09211;A8MX94;A0A087X2E9 P09211 GSTP1 Glutathione S-transferase P 1 EEVVTVET(0.026)WQEGS(0.974)LK 190.19 2.71E-05 4765400 1371.9 1799.6 1857 1209.8 1237.9 1115.1 1669.1 1537.4 2180.8 2856.1 TRUE FALSE 1255.212701 1682.445713 1730.952014 1302.979006 1188.591822 1178.235998 1557.757384 1523.958674 2407.501964 3209.93523 0.391039884 0.524136966 0.539248268 0.405920653 0.370285297 0.367059119 0.485292466 0.47476306 0.750015745 1 11.64832847 -8.467587883 1.931695464 0.999546512 0.439637106 0.908873937 0.057374128 0.096106563 0.790447864 0.060421674 0.01708914 3.41E-09 8.467587883 -0.559909406 down EEVVTVETWQEGS(ph)LK ddPTM_A459_MK2206_30min_R2 1 EEVVTVETWQEGSLK 15 0 P09211;A8MX94;A0A087X2E9 P09211 GSTP1 Glutathione S-transferase P 1 EEVVTVET(0.001)WQEGS(0.999)LK 181.72 8.00E-11 0 12619 11093 16220 11717 9917.9 6755.6 13598 11834 9776.8 10472 TRUE FALSE 13585.12034 10542.13775 16760.7667 10759.68362 9528.473413 7012.689092 11812.56627 13380.74443 10627.16839 10130.2995 1.341038372 1.040654104 1.654518379 1.062128876 0.940591482 0.69224894 1.166062886 1.320863656 1.049047799 1 13.30638921 -5.962918851 24.96803178 1.031287927 1.322161492 0.329035297 0.204095533 218.8045415 147327.3765 0.060403189 0.08959217 1.09E-06 5.962918851 0.290873565 EFAPS(ph)DEELDSYR ddPTM_A459_MK2206_30min_R1 2 EFAPSDEELDSYR 13 0 I3L0X5;I3L4C3;O75391 I3L0X5 SPAG7 Sperm-associated antigen 7 1 EFAPS(1)DEELDSYR;EFAPS(1)DEELDSYR 295.29 3.33E-61 32937000 6231.4 5986.1 6135.2 5085 6317.5 5787.5 5670 5326.5 4981.7 5082.4 TRUE FALSE 5701.386708 5596.403802 5718.759718 5476.647581 6065.860597 6115.183249 5291.764645 5279.930972 5499.565542 5712.046082 0.998133878 0.979754666 1.001175347 0.95878911 1.061941817 1.070576666 0.926421911 0.924350206 0.962801326 1 12.4797919 -7.287964182 24.99151131 0.947089208 1.009671619 0.361142039 0.037578696 853.2228919 803897.6768 0.016680739 0.011250899 5.15E-08 7.287964182 0.062582411 EFAPS(ph)DEELDSYR ddPTM_A459_MK2206_30min_R2 1 EFAPSDEELDSYR 13 0 I3L0X5;I3L4C3;O75391 I3L0X5 SPAG7 Sperm-associated antigen 7 1 EFAPS(1)DEELDSYR 138.31 0.00099486 8851200 18183 19560 18940 23684 22766 19414 27207 20916 19399 21623 TRUE FALSE 19575.10446 18588.67884 19571.45015 21748.94144 21872.09245 20152.81337 23634.68822 23649.79302 21086.28995 20917.44328 0.935826822 0.888668782 0.93565212 1.039751424 1.045638903 0.963445346 1.129903301 1.130625416 1.008072051 1 14.3524189 -5.736710401 3.432370695 1.05237131 0.911680184 0.560859092 0.050924441 0.169569113 4.154524144 0.015205505 0.026550308 1.83E-06 5.736710401 -0.140691125 EFAPSDEELDS(ph)YR ddPTM_A459_MK2206_30min_R2 1 EFAPSDEELDSYR 13 0 I3L0X5;I3L4C3;O75391 I3L0X5 SPAG7 Sperm-associated antigen 7 1 EFAPS(0.096)DEELDS(0.904)YR 193 0.00018333 8554900 16193 24349 22237 21804 23630 22252 22784 16341 18476 20514 TRUE FALSE 17432.74853 23139.86407 22978.37048 20022.54345 22702.16747 23098.81545 19792.43343 18476.82481 20083.00908 19844.62986 0.878461763 1.166051684 1.157913785 1.008965327 1.143995511 1.163983184 0.997369745 0.931074298 1.012012279 1 14.27646103 -7.424658259 6.937909524 0.975879288 1.092222344 0.249191767 0.086103691 0.332032169 20.17364498 0.035898513 0.024005758 3.76E-08 7.424658259 0.116343056 EFDEDS(ph)DEKEEEEDTYEK ddPTM_A459_MK2206_30min_R2 3 EFDEDSDEKEEEEDTYEK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 EFDEDS(1)DEKEEEEDTYEK;EFDEDS(0.837)DEKEEEEDT(0.146)Y(0.017)EK;EFDEDS(1)DEKEEEEDTYEK 103.77 0.0010874 49313600 366231 124612 215914 109980 98641 63799 178283 137111 75912 302440 TRUE FALSE 394269.9269 118423.9493 223112.465 100994.2822 94767.85871 66226.91565 154874.2279 155031.8785 82514.68854 292571.4076 1.347602386 0.404769387 0.762591488 0.345195325 0.323913603 0.226361544 0.529355309 0.529894154 0.282032647 1 18.15842926 -3.106759271 1.65677538 0.455568747 199.970181 0.536847834 0.232691293 222.6819483 3.538189213 0.060448895 166520.2084 0.000782061 3.106759271 199.5146123 EFDELNPS(ph)AQR ddPTM_A459_MK2206_30min_R1 1 EFDELNPSAQR 11 0 H7C5W9;P16615-5;P16615-2;P16615-3;P16615-4;P16615 H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 1 EFDELNPS(1)AQR 120.59 0.0046868 4782500 2211.7 1860.6 1808.3 1846.6 2411.4 1940.3 2497.5 1892.9 2338.6 1706.5 TRUE FALSE 2023.583301 1739.474602 1685.557634 1988.825452 2315.348832 2050.158109 2330.896332 1876.350575 2581.705839 1917.914103 1.055095897 0.906961682 0.878849387 1.036973162 1.207222382 1.068951996 1.215328845 0.978328785 1.346100868 1 10.90532239 -6.004192456 5.614021735 1.134949673 0.944036416 0.373916793 0.110185089 0.160335481 18.03955245 0.029792088 0.041987733 9.90E-07 6.004192456 -0.190913257 EFDELNPS(ph)AQR ddPTM_A459_MK2206_30min_R2 1 EFDELNPSAQR 11 0 H7C5W9;P16615-5;P16615-2;P16615-3;P16615-4;P16615 H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 1 EFDELNPS(1)AQR 108.59 0.0098808 4163200 45074 24918 21358 28288 23721 33832 45230 20361 28053 23086 TRUE FALSE 48524.9001 23680.60835 22070.06506 25976.77991 22789.59435 35119.50047 39291.24667 23022.25261 30492.99923 22332.70571 2.172817782 1.060355546 0.98823964 1.163172087 1.020458275 1.572559139 1.759358995 1.030876102 1.365396546 1 14.44687043 -1.523049789 0.02343857 1.39E-05 3.038979685 0.079253005 0.367088503 9426.322303 17.06538216 779.5171979 1556.339326 0.029988187 1.523049789 3.03896576 EFET(ph)PEK ddPTM_A459_MK2206_30min_R1 1 EFETPEK 7 0 Q9Y2X3;F8WED0 Q9Y2X3 NOP58 Nucleolar protein 58 1 EFET(1)PEK 119.62 0.023425 4920400 2841.1 2941.6 3009.7 2512.7 2297.6 2315.4 2907.5 2803 3088.7 2593.3 TRUE FALSE 2599.449526 2750.101305 2805.40995 2706.228589 2206.081727 2446.495947 2713.54598 2778.493667 3409.781418 2914.577582 0.891878652 0.943567714 0.962544269 0.928514858 0.756913022 0.839399837 0.931025476 0.953309215 1.169905869 1 11.50907109 -8.042790163 3.773003708 1.084437503 0.893478955 0.548642995 0.068273224 0.182459447 5.276312146 0.052502566 0.019165126 9.06E-09 8.042790163 -0.190958548 EFGGIGAPPS(ph)PGVARR ddPTM_A459_MK2206_30min_R1 1 EFGGIGAPPSPGVARR 16 1 J3KQV8;O43426;C9JFZ1;O43426-2 J3KQV8 SYNJ1 Synaptojanin-1 1 EFGGIGAPPS(1)PGVARR 59.864 0.038508 7665700 771.54 815.31 771.05 789.65 834.3 636.62 1100.5 652.31 539.16 722.21 TRUE FALSE 705.9164715 762.2331708 718.7132743 850.4689798 801.0680643 672.6648742 1027.087653 646.6069224 595.2076114 811.6828272 0.869694969 0.939077612 0.885460737 1.047784863 0.986922524 0.828728725 1.265380538 0.796625111 0.733300732 1 9.66477228 EFHLNES(ph)GDPSSK ddPTM_A459_MK2206_30min_R1 2 EFHLNESGDPSSK 13 0 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105 Q01105-2;Q01105 SET;SETSIP Protein SET;Protein SETSIP 1 EFHLNES(1)GDPSSK;EFHLNES(1)GDPSSK 152.32 0.00029228 25087000 6459.6 7392.2 8652.8 6949.1 7129.3 6315.1 6874 7287 6883 6749 TRUE FALSE 5910.177099 6910.966436 8065.472044 7484.320886 6845.324884 6672.655505 6415.448002 7223.290527 7598.512481 7585.117072 0.779180736 0.911121921 1.063328617 0.986711321 0.902467928 0.879703694 0.845794197 0.95229783 1.001766012 1 12.88895573 -8.001938806 24.91643574 0.992932665 0.915941098 0.199626576 0.072111972 134.36916 1726816.172 0.044278766 0.020740637 9.96E-09 8.001938806 -0.076991568 EFHLNES(ph)GDPSSK ddPTM_A459_MK2206_30min_R2 7 EFHLNESGDPSSK 13 0 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105 Q01105-2;Q01105 SET;SETSIP Protein SET;Protein SETSIP 1 EFHLNES(0.999)GDPSSK;EFHLNES(0.871)GDPS(0.126)S(0.004)K;EFHLNES(0.992)GDPS(0.006)S(0.002)K;EFHLNES(0.656)GDPS(0.329)S(0.015)K;EFHLNES(0.997)GDPS(0.003)SK;EFHLNES(0.994)GDPS(0.004)S(0.002)K;EFHLNES(0.975)GDPS(0.017)S(0.008)K 142.94 0.00049533 52374500 356715 400322 361457 382612 407171 334238 433598 348144 332642 399300 TRUE FALSE 384025.3747 380442.5916 373507.796 351351.3757 391183.4207 346957.6613 376666.0618 393647.6162 361574.5999 386270.8737 0.994186724 0.984911412 0.966958219 0.909598418 1.012717881 0.898223721 0.975134517 1.01909733 0.936064882 1 18.55925337 -10.88578537 5.34121312 1.000013292 0.966391789 0.064082261 0.038611353 5.93E-06 7.08E-07 0.036291787 0.008798572 1.30E-11 10.88578537 -0.033621504 EFHLNESGDPSSK ddPTM_A459_MK2206_30min_R2 1 EFHLNESGDPSSK 13 0 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105 Q01105-2;Q01105 SET;SETSIP Protein SET;Protein SETSIP 0 139.3 0.001324 15084000 105740 138490 114080 148100 117140 118690 133180 109580 115570 140700 FALSE TRUE 113835.5357 131612.788 117883.3703 135999.7563 112540.495 123206.8311 115693.306 123902.4822 125622.0697 136108.9705 0.836355864 0.966966303 0.866095525 0.999197597 0.82684113 0.905207281 0.850005004 0.910318268 0.92295217 1 17.05440263 -8.718142904 1.978679887 0.999806184 0.896539353 0.268707149 0.052250185 0.982037491 6.977256921 0.047044231 0.013063231 1.91E-09 8.718142904 -0.103266831 EFIPPNPWS(ph)SSGLS(ph)GKS(ph)S(ph)GTMSVISK ddPTM_A459_MK2206_30min_R2 1 EFIPPNPWSSSGLSGKSSGTMSVISK 26 1 Q9UPZ9 Q9UPZ9 ICK Serine/threonine-protein kinase ICK 4 EFIPPNPWS(0.47)S(0.47)S(0.077)GLS(0.497)GKS(0.497)S(0.497)GT(0.497)MS(0.497)VIS(0.497)K 42.041 0.041803 6184300 38296 10783 25987 10060 8621.3 3754 13095 14139 5771.8 21516 TRUE FALSE 41227.9712 10247.5319 26853.39361 9238.06582 8282.784443 3896.861101 11375.61077 15987.01585 6273.820731 20813.93468 1.980786998 0.492339966 1.290164211 0.443840435 0.397944193 0.187223663 0.546538218 0.768091958 0.301424062 1 14.3452621 -2.636389765 1.146076707 0.543949296 199.9999871 0.59249786 0.332437416 155.6782513 1.86066195 0.097667169 79863.9208 0.002309991 2.636389765 199.4560378 EFIPPNPWS(ph)SSGLS(ph)GKS(ph)SGTMSVIS(ph)K ddPTM_A459_MK2206_30min_R2 1 EFIPPNPWSSSGLSGKSSGTMSVISK 26 1 Q9UPZ9 Q9UPZ9 ICK Serine/threonine-protein kinase ICK 4 EFIPPNPWS(0.481)S(0.481)S(0.193)GLS(0.725)GKS(0.734)S(0.218)GT(0.218)MS(0.442)VIS(0.507)K 52.169 0.010849 6528500 24519 9636.8 16966 5251.4 6266.4 1230 9249.3 9471.9 3673.6 16399 TRUE FALSE 26396.19349 9158.250525 17531.63797 4822.343822 6020.34965 1276.808512 8034.8558 10709.90985 3993.123088 15863.90197 1.66391557 0.577301255 1.10512773 0.3039822 0.379499928 0.080485149 0.506486728 0.675111954 0.251711281 1 13.95346005 -1.97239995 0.877493548 0.454637966 199.9998048 0.543897307 0.306514433 235.2766106 1.410663757 0.100511844 92769.81903 0.010656143 1.97239995 199.5451669 EFITGDVEPTDAES(ph)EWHSENEEEEK ddPTM_A459_MK2206_30min_R1 4 EFITGDVEPTDAESEWHSENEEEEK 25 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PKT8;C9JZI7 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 EFIT(0.001)GDVEPT(0.172)DAES(0.824)EWHS(0.003)ENEEEEK;EFITGDVEPT(0.033)DAES(0.877)EWHS(0.09)ENEEEEK;EFITGDVEPT(0.021)DAES(0.961)EWHS(0.018)ENEEEEK;EFITGDVEPTDAES(0.804)EWHS(0.196)ENEEEEK 113.29 7.56E-08 222440200 7157.73 6763.05 7424.02 4946.09 5134.14 5295.97 7450.48 5263.28 7704.98 11532.4 TRUE FALSE 6548.927477 6322.774216 6920.098207 5327.038709 4929.636332 5595.823245 6953.472073 5217.263698 8505.940244 12961.12078 0.505274782 0.487826194 0.533912022 0.411001394 0.380340282 0.431739148 0.536486944 0.402531833 0.656265796 1 13.66190286 -8.599705656 3.070354826 0.999673127 0.462259306 0.907382991 0.052847267 0.095506569 2.208171583 0.053560565 0.014240462 2.51E-09 8.599705656 -0.537413821 EFITGDVEPTDAES(ph)EWHSENEEEEK ddPTM_A459_MK2206_30min_R2 4 EFITGDVEPTDAESEWHSENEEEEK 25 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PKT8;C9JZI7 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 EFITGDVEPT(0.021)DAES(0.916)EWHS(0.063)ENEEEEK;EFITGDVEPT(0.001)DAES(0.849)EWHS(0.151)ENEEEEK;EFITGDVEPT(0.016)DAES(0.97)EWHS(0.014)ENEEEEK;EFITGDVEPT(0.116)DAES(0.817)EWHS(0.067)ENEEEEK 108.4 1.63E-07 101803100 106089 90528.5 93949.6 98993.2 88416.9 78549.3 121037.2 84738 70849.2 113378.8 TRUE FALSE 114211.2554 86032.98633 97081.83277 90905.1389 84945.20825 81538.54865 105144.8702 95813.54755 77011.53535 109679.259 1.04132045 0.784405247 0.88514304 0.82882707 0.774487437 0.743427238 0.958657737 0.873579457 0.702152221 1 16.7429312 -4.752763715 24.98500027 0.834880009 1.041320844 0.317707803 0.088781444 392.4132851 1130023.937 0.021297145 0.245109131 1.77E-05 4.752763715 0.206440834 EFITGDVEPTDAES(ph)EWHSENEEEEKLAGDMK ddPTM_A459_MK2206_30min_R2 1 EFITGDVEPTDAESEWHSENEEEEKLAGDMK 31 1 E9PNJ7;C9J6D1;Q99733;Q99733-2;A8MXH2;E9PKT8;C9JZI7 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 EFITGDVEPT(0.01)DAES(0.542)EWHS(0.448)ENEEEEKLAGDMK 51.539 0.0067171 26054000 51798 80717 70939 80509 85176 61721 97364 59414 63578 95529 TRUE FALSE 55763.69471 76708.71115 73304.07085 73931.15716 81831.56226 64069.8359 84579.98984 67179.6138 69107.89952 92411.89655 0.603425498 0.830073984 0.793231971 0.800017746 0.885508958 0.693307229 0.915250016 0.726958501 0.747824708 1 16.49579097 -11.87319659 2.324805065 2.413735431 0.783268947 0.370478227 0.086779293 10474882.91 1537819.337 77589220.52 0.021924865 1.34E-12 11.87319659 -1.630466483 EFITGDVEPTDAESEWHS(ph)ENEEEEK ddPTM_A459_MK2206_30min_R1 4 EFITGDVEPTDAESEWHSENEEEEK 25 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PKT8;C9JZI7 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 EFITGDVEPT(0.001)DAES(0.071)EWHS(0.928)ENEEEEK;EFITGDVEPT(0.054)DAES(0.256)EWHS(0.69)ENEEEEK;EFITGDVEPT(0.001)DAES(0.017)EWHS(0.982)ENEEEEK;EFITGDVEPTDAES(0.031)EWHS(0.969)ENEEEEK 138.12 2.15E-08 313182000 6895.06 6988.44 7139.39 4641.2 5111.05 5386.53 7821.13 5419.56 8568.2 11126.92 TRUE FALSE 6308.59894 6533.491286 6654.788098 4998.666028 4907.466056 5691.510674 7299.396688 5372.177358 9458.895052 12505.40685 0.504469708 0.522453317 0.532152866 0.399720384 0.392427541 0.455123991 0.583699257 0.429588371 0.756384431 1 13.61026437 -8.495038608 2.880091182 0.998873261 0.477830158 0.890106505 0.059274545 0.074826704 1.437183909 0.060630983 0.016261449 3.20E-09 8.495038608 -0.521043103 EFITGDVEPTDAESEWHS(ph)ENEEEEK ddPTM_A459_MK2206_30min_R2 5 EFITGDVEPTDAESEWHSENEEEEK 25 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PKT8;C9JZI7 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 EFITGDVEPT(0.004)DAES(0.139)EWHS(0.857)ENEEEEK;EFITGDVEPTDAES(0.057)EWHS(0.943)ENEEEEK;EFITGDVEPTDAES(0.022)EWHS(0.978)ENEEEEK;EFITGDVEPT(0.012)DAES(0.368)EWHS(0.62)ENEEEEK;EFITGDVEPT(0.001)DAES(0.229)EWHS(0.77)ENEEEEK 116.65 5.15E-08 93900100 133392.6 113598 112380.1 122356.8 97023.4 85584.2 141070.4 108036.8 79527.7 140537 TRUE FALSE 143605.24 107956.8885 116126.7964 112359.858 93213.77381 88841.1667 122547.687 122157.5807 86444.87559 135951.2892 1.056299215 0.794085066 0.854179443 0.826471442 0.68564097 0.653477927 0.901408789 0.898539333 0.635851827 1 17.05273031 -4.760772652 24.99999906 0.799021306 1.056299509 0.309792958 0.111920518 19.81711339 742528.7553 0.027418705 0.158791078 1.73E-05 4.760772652 0.257278203 EFITGDVEPTDAESEWHS(ph)ENEEEEKLAGDMK ddPTM_A459_MK2206_30min_R1 7 EFITGDVEPTDAESEWHSENEEEEKLAGDMK 31 1 E9PNJ7;C9J6D1;Q99733;Q99733-2;A8MXH2;E9PKT8;C9JZI7 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 EFITGDVEPT(0.001)DAES(0.044)EWHS(0.955)ENEEEEKLAGDMK;EFITGDVEPTDAES(0.057)EWHS(0.943)ENEEEEKLAGDMK;EFITGDVEPTDAES(0.002)EWHS(0.998)ENEEEEKLAGDMK;EFITGDVEPTDAES(0.014)EWHS(0.985)ENEEEEKLAGDMK;EFITGDVEPT(0.002)DAES(0.07)EWHS(0.928)ENEEEEKLAGDMK;EFITGDVEPT(0.006)DAES(0.086)EWHS(0.908)ENEEEEKLAGDMK;EFITGDVEPT(0.034)DAES(0.159)EWHS(0.807)ENEEEEKLAGDMK 129.22 1.88E-18 574350800 37872.3 36551.9 42551.9 36837.2 36046.7 29729.04 32408.3 39561.1 28531.43 25536.2 TRUE FALSE 34651.06201 34172.36467 39663.59558 39674.40753 34610.88361 31412.27255 30246.40144 39215.22147 31497.37425 28699.81724 1.207361765 1.190682309 1.382015615 1.38239234 1.205961812 1.09451124 1.053888294 1.366392724 1.097476475 1 14.80875393 -6.509410567 8.754270769 1.141963265 1.290635226 0.344243166 0.107799201 0.261742044 141.8189527 0.035537035 0.038219099 3.09E-07 6.509410567 0.14867196 EFITGDVEPTDAESEWHS(ph)ENEEEEKLAGDMK ddPTM_A459_MK2206_30min_R2 7 EFITGDVEPTDAESEWHSENEEEEKLAGDMK 31 1 E9PNJ7;C9J6D1;Q99733;Q99733-2;A8MXH2;E9PKT8;C9JZI7 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 EFITGDVEPT(0.002)DAES(0.168)EWHS(0.83)ENEEEEKLAGDMK;EFITGDVEPTDAES(0.039)EWHS(0.96)ENEEEEKLAGDMK;EFITGDVEPT(0.038)DAES(0.212)EWHS(0.749)ENEEEEKLAGDMK;EFITGDVEPT(0.012)DAES(0.454)EWHS(0.533)ENEEEEKLAGDMK;EFITGDVEPT(0.011)DAES(0.235)EWHS(0.753)ENEEEEKLAGDMK;EFITGDVEPT(0.006)DAES(0.03)EWHS(0.964)ENEEEEKLAGDMK;EFITGDVEPT(0.005)DAES(0.037)EWHS(0.958)ENEEEEKLAGDMK 99.423 1.31E-08 215944500 202039 311971 269037 301440 328604 223267 340747 253313 240655 288066 TRUE FALSE 217507.2612 296478.9738 278006.5593 276811.3877 315701.3559 231763.5821 296006.5096 286421.8789 261586.7369 278666.43 0.780529112 1.063920666 0.997632041 0.993343144 1.132900564 0.831688202 1.062225219 1.027830582 0.938709183 1 18.08817969 -4.752286488 24.9657445 1.005949018 0.780528667 0.438402809 0.076337891 326.4502796 890371.6381 0.018041017 0.218172959 1.77E-05 4.752286488 -0.22542035 EFLEDYDDDRDDPK ddPTM_A459_MK2206_30min_R1 1 EFLEDYDDDRDDPK 14 1 P49756 P49756 RBM25 RNA-binding protein 25 0 118.76 0.0065128 6464200 4032.2 4573.8 5374.2 3884.7 3404.6 3296.5 4095 3918.5 4858.6 4546.5 FALSE TRUE 3689.240216 4276.044789 5009.414277 4183.900267 3268.987573 3483.144981 3821.830022 3884.240968 5363.668857 5109.754744 0.72199947 0.836839536 0.980362958 0.818806474 0.639754301 0.681665785 0.74794784 0.760161918 1.049692035 1 12.31903833 -8.260122449 24.90687787 1.024846044 0.77559972 0.558433773 0.089405413 90.32309769 1708359.727 0.077929301 0.025755199 5.49E-09 8.260122449 -0.249246324 EFLEDYDDDRDDPK ddPTM_A459_MK2206_30min_R2 1 EFLEDYDDDRDDPK 14 1 P49756 P49756 RBM25 RNA-binding protein 25 0 133.15 0.0021135 9095400 75227 66046 63483 62538 60963 44952 65963 56174 42864 71678 FALSE TRUE 80986.43696 62766.25168 65599.49154 57428.44535 58569.28631 46662.67986 57301.97886 63516.13467 46592.23324 69339.15273 1.167975578 0.905206499 0.946067106 0.828225369 0.844678425 0.672962937 0.826401486 0.916021211 0.671946965 1 16.08138259 -1.522889014 0.75609726 0.81390489 64.8095711 0.513070954 0.09782617 298.1287843 1.254011333 0.034712874 32521.21355 0.029999291 1.522889014 63.99566621 EFLGLS(ph)PFSLIK ddPTM_A459_MK2206_30min_R1 1 EFLGLSPFSLIK 12 0 Q7Z4H7;Q5VY60;Q7Z4H7-2 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 EFLGLS(0.983)PFS(0.017)LIK 156 0.00043128 8941000 1168.6 1386.6 1194.4 871.3 1220.8 933.54 982.41 915.9 1221.1 966.3 TRUE FALSE 1069.204433 1296.332088 1113.327456 938.407677 1172.172951 986.3962281 916.8752214 907.8923829 1348.037715 1086.012539 0.984523102 1.193662173 1.025151566 0.86408549 1.07933648 0.908273332 0.844258412 0.835987017 1.241272698 1 10.08482505 -5.522710425 24.99977205 0.956797399 1.094171206 0.126782536 0.125674143 9.623705779 1429330.373 0.033255304 0.058371203 3.00E-06 5.522710425 0.137373807 EFLGLSPFS(ph)LIK ddPTM_A459_MK2206_30min_R1 1 EFLGLSPFSLIK 12 0 Q7Z4H7;Q5VY60;Q7Z4H7-2 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 EFLGLS(0.081)PFS(0.919)LIK 115.37 0.0052724 7324400 3396.4 3136.5 3286.8 2784.9 3164.9 2798 3168.1 2714.8 2795 3479.4 TRUE FALSE 3107.518345 2932.31328 3063.701174 2999.393481 3038.835331 2956.420342 2956.76183 2691.06479 3085.550252 3910.45434 0.794669385 0.749865112 0.783464249 0.76701918 0.777105438 0.756029884 0.756117211 0.688171899 0.7890516 1 11.93312052 -8.558689456 23.58438597 1 0.758879739 0.874895342 0.027166779 2941.111651 1936966.92 0.026577258 0.006862218 2.76E-09 8.558689456 -0.241120262 EFLHAQEEVKR ddPTM_A459_MK2206_30min_R2 2 EFLHAQEEVKR 11 1 P43686 P43686 PSMC4 26S protease regulatory subunit 6B 0 ; 112.3 0.0052325 6180700 60467 84697 75247 90139 84075 73700 89988 64174 73173 82106 FALSE TRUE 65096.40001 80491.07014 77755.69742 82774.35536 80773.79306 76504.70514 78172.46751 72561.76214 79537.45527 79426.88794 0.819576364 1.013398261 0.978959386 1.042145267 1.016957798 0.963209149 0.984206602 0.913566728 1.001392064 1 16.27733986 -4.756344999 24.99959842 0.988767214 0.819576102 0.705394605 0.033108162 94.37863948 463091.551 0.008715692 0.071258137 1.75E-05 4.756344999 -0.169191111 EFNAEVHR ddPTM_A459_MK2206_30min_R1 5 EFNAEVHR 8 0 A0A2R8Y6J3;P46777 A0A2R8Y6J3 RPL5 60S ribosomal protein L5 0 ;;;; 155.58 0.00084678 88636100 35836 36852.4 35004.6 28303.1 34599.2 34497 40353.9 31818 34700.5 34977.9 FALSE TRUE 32787.96002 34453.30206 32628.58528 30483.00967 33221.0406 36450.19033 37661.96496 31539.81858 38307.74115 39311.22632 0.834060982 0.876423996 0.830006803 0.775427595 0.845077697 0.927220892 0.958046047 0.802310727 0.974473318 1 15.26265375 -6.712049134 5.219707018 0.921799848 0.830239565 0.453324822 0.054536684 0.20599549 12.22053529 0.018308698 0.017927568 1.94E-07 6.712049134 -0.091560284 EFNAEVHR ddPTM_A459_MK2206_30min_R2 3 EFNAEVHR 8 0 A0A2R8Y6J3;P46777 A0A2R8Y6J3 RPL5 60S ribosomal protein L5 0 ;; 155.58 0.00084678 70110000 304278 316542 293928 343474 315659 294147 348314 273391 252853 311441 FALSE TRUE 327573.7576 300822.9846 303727.4128 315411.0755 303264.6416 305340.9702 302579.9534 309124.1424 274845.6969 301278.7057 1.087278163 0.998487377 1.008127714 1.046907961 1.00659169 1.013483411 1.004319083 1.026040462 0.912263933 1 18.20073918 -8.237075737 24.8775105 0.956131963 1.021720832 0.419329257 0.031817853 580.5491384 592795.8788 0.020124695 0.007596777 5.79E-09 8.237075737 0.065588869 EFPGFLENQKDPLAVDK ddPTM_A459_MK2206_30min_R1 2 EFPGFLENQKDPLAVDK 17 1 P60903 P60903 S100A10 Protein S100-A10 0 ; 144.15 0.0013936 59817000 2721.5 2573.6 2543.8 2500 2395.9 2417.1 2187.3 2657.2 2243.4 2176.78 FALSE TRUE 2490.022134 2406.058172 2371.133943 2692.550433 2300.46623 2553.954113 2041.389208 2633.968381 2476.609458 2446.45594 1.01780788 0.983487228 0.969211791 1.100592244 0.940326041 1.043940367 0.83442713 1.076646563 1.012325388 1 11.25647759 EFPGFLENQKDPLAVDK ddPTM_A459_MK2206_30min_R2 2 EFPGFLENQKDPLAVDK 17 1 P60903 P60903 S100A10 Protein S100-A10 0 ; 103.66 0.0087178 8159100 26822 27820 25876 28439 24240 23051 31368 22797 28579 31053 FALSE TRUE 28875.51294 26438.49925 26738.69293 26115.44273 23288.2158 23928.22196 27249.34392 25776.64617 31064.74976 30039.74315 0.96124367 0.880117354 0.890110571 0.86936305 0.775246835 0.796552149 0.907109751 0.858084773 1.034121683 1 14.87458486 -8.258987446 24.97723292 1.017060855 0.864399469 0.586212603 0.05030824 147.1072491 1498584.607 0.040686843 0.013735581 5.51E-09 8.258987446 -0.152661387 EFSGNPIKVS(ph)FATR ddPTM_A459_MK2206_30min_R2 1 EFSGNPIKVSFATR 14 1 H3BPE7;P35637-2;P35637 H3BPE7 FUS RNA-binding protein FUS 1 EFSGNPIKVS(0.899)FAT(0.101)R 69.111 0.033792 5256600 18068 14065 14576 22096 15894 15520 26059 17139 13295 19141 TRUE FALSE 19451.29997 13366.55255 15061.95657 20290.68612 15269.9217 16110.62448 22637.422 19379.12615 14451.37507 18516.43074 1.050488631 0.721875222 0.813437362 1.095820593 0.824668745 0.870071814 1.222558619 1.046590805 0.780462243 1 14.17651841 EFSGPS(ph)TPTGTLEFEGGEVSLEGGK ddPTM_A459_MK2206_30min_R1 1 EFSGPSTPTGTLEFEGGEVSLEGGK 25 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 EFS(0.005)GPS(0.449)T(0.449)PT(0.097)GTLEFEGGEVSLEGGK 198.18 3.63E-31 47988000 9450.3 8010.8 7421.3 5119.7 6162.8 6237.3 8125.4 6189.3 7433.6 8269.8 TRUE FALSE 8646.502359 7489.295464 6917.562833 5514.020181 5917.322626 6590.450536 7583.369392 6135.187603 8206.349321 9294.325258 0.930299093 0.805792272 0.74427811 0.5932674 0.636659732 0.709083269 0.815913924 0.660100377 0.882941913 1 13.18213442 -8.494116237 4.271675101 0.999376559 0.733672375 0.459939263 0.092838123 0.165361286 7.702448403 0.095981735 0.025100237 3.21E-09 8.494116237 -0.265704184 EFSGPST(ph)PTGTLEFEGGEVSLEGGK ddPTM_A459_MK2206_30min_R1 2 EFSGPSTPTGTLEFEGGEVSLEGGK 25 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 EFS(0.002)GPS(0.171)T(0.826)PT(0.002)GTLEFEGGEVSLEGGK;EFS(0.005)GPS(0.187)T(0.677)PT(0.122)GT(0.009)LEFEGGEVSLEGGK 223.87 5.67E-35 47383800 16774.3 15011.9 13024.3 9416 10026.2 10425.6 13440.5 10588.6 12813.5 15329.9 TRUE FALSE 15347.5577 14034.62258 12140.2468 10141.22195 9626.835223 11015.88846 12543.90877 10496.02499 14145.50918 17229.08375 0.89079361 0.814589028 0.704636821 0.588610637 0.558754915 0.639377498 0.728065923 0.609203899 0.82102504 1 14.07255836 -8.550312514 4.516174823 0.999823418 0.688527689 0.494689762 0.097118928 0.171950774 12.74661948 0.103452893 0.026987058 2.82E-09 8.550312514 -0.311295729 EFSGPST(ph)PTGTLEFEGGEVSLEGGK ddPTM_A459_MK2206_30min_R2 2 EFSGPSTPTGTLEFEGGEVSLEGGK 25 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 EFS(0.037)GPS(0.143)T(0.672)PT(0.143)GT(0.005)LEFEGGEVSLEGGK;EFS(0.053)GPS(0.172)T(0.706)PT(0.063)GT(0.007)LEFEGGEVSLEGGK 127.89 9.16E-08 12762500 216050 150080 167178 152678 146736 131327 174184 132266 128203 178270 TRUE FALSE 232590.9541 142627.2454 172751.6311 140203.719 140974.4074 136324.741 151313.4316 149553.6203 139353.8652 172453.0645 1.34872033 0.827049643 1.001731292 0.812996391 0.817465365 0.790503442 0.87741805 0.867213469 0.808068361 1 17.39584424 -4.75896204 24.9946652 0.861708292 1.348720971 0.799010482 0.072447949 27.44417965 276834.5096 0.017498405 0.115122045 1.74E-05 4.75896204 0.487012679 EFT(ph)GSPPSSATK ddPTM_A459_MK2206_30min_R1 1 EFTGSPPSSATK 12 0 C9J3F6;Q92609;Q92609-2 C9J3F6;Q92609 TBC1D5 TBC1 domain family member 5 1 EFT(0.707)GS(0.134)PPS(0.134)S(0.024)ATK 114.87 0.012619 82589000 4502.1 3698.9 3756.9 3503.1 3838.7 3576.8 4744.9 3678.9 4957.1 5021.1 TRUE FALSE 4119.172754 3458.100938 3501.892095 3772.909369 3685.79645 3779.315325 4428.376379 3646.735765 5472.408284 5643.151775 0.729941869 0.612796018 0.620556071 0.668581941 0.653145015 0.669717115 0.784734587 0.64622323 0.96974324 1 12.46228544 -8.267302617 19.59273433 0.984873438 0.672220553 0.867632017 0.048691511 8.614793491 28777.30002 0.043319362 0.012652879 5.40E-09 8.267302617 -0.312652885 EFT(ph)GSPPSSATK ddPTM_A459_MK2206_30min_R2 1 EFTGSPPSSATK 12 0 C9J3F6;Q92609;Q92609-2 C9J3F6;Q92609 TBC1D5 TBC1 domain family member 5 1 EFT(0.502)GS(0.495)PPS(0.003)SATK 168.82 0.00087174 105640000 72365 68672 64664 66660 65451 50858 81389 59892 53811 75762 TRUE FALSE 77905.32004 65261.84834 66819.86549 61213.66477 62881.06488 52793.43683 70702.52653 67720.09004 58491.38351 73289.89214 1.062974958 0.890461787 0.911720068 0.835226564 0.857977315 0.720337215 0.964696829 0.924003134 0.798082543 1 16.16132662 -4.140482045 1.466699794 0.867883818 1.778041795 0.336163129 0.077320527 7.497754985 3.853501793 0.021426737 15.84961622 7.24E-05 4.140482045 0.910157977 EFTGS(ph)PPSSATK ddPTM_A459_MK2206_30min_R1 2 EFTGSPPSSATK 12 0 C9J3F6;Q92609;Q92609-2 C9J3F6;Q92609 TBC1D5 TBC1 domain family member 5 1 EFT(0.012)GS(0.907)PPS(0.039)S(0.039)AT(0.003)K;EFT(0.003)GS(0.974)PPS(0.017)S(0.005)ATK 122.52 0.0035218 116356000 12269.2 13426.4 13576.1 10377.3 11783.9 11559.2 13279 12102.3 13862.1 14826.2 TRUE FALSE 11225.64011 12552.33892 12654.59216 11176.56144 11314.52231 12213.67191 12393.18214 11996.49087 15303.1149 16662.98159 0.673687362 0.753306895 0.759443446 0.670741991 0.679021473 0.732982381 0.743755376 0.719948636 0.918389954 1 14.02435895 -8.369401451 2.812379198 0.998715424 0.71632 0.907520901 0.031462894 0.072079665 1.070650631 0.031409875 0.008585023 4.27E-09 8.369401451 -0.282395424 EFTGS(ph)PPSSATK ddPTM_A459_MK2206_30min_R2 3 EFTGSPPSSATK 12 0 C9J3F6;Q92609;Q92609-2 C9J3F6;Q92609 TBC1D5 TBC1 domain family member 5 1 EFTGS(0.745)PPS(0.173)S(0.081)AT(0.001)K;EFT(0.002)GS(0.988)PPS(0.005)S(0.005)ATK;EFT(0.015)GS(0.946)PPS(0.034)S(0.005)ATK 154.23 0.00044769 316560000 226213 216930 221015 217153 187163 184322 260596 213926 183375 232279 TRUE FALSE 243532.0412 206157.5716 228383.5298 199410.9053 179814.0402 191336.5029 226379.4322 241886.8627 199324.626 224699.7553 1.083810888 0.917480179 1.016394208 0.887454929 0.800241371 0.851520744 1.007475206 1.076489213 0.887070953 1 17.77763903 -9.905813971 12.68138978 1.000003305 0.945319674 0.028572229 0.090918863 0 0 0.09324303 0.022614756 1.24E-10 9.905813971 -0.054683631 EFTGS(ph)PPSSATKK ddPTM_A459_MK2206_30min_R1 1 EFTGSPPSSATKK 13 1 C9J3F6;Q92609;Q92609-2 C9J3F6;Q92609 TBC1D5 TBC1 domain family member 5 1 EFT(0.207)GS(0.514)PPS(0.069)S(0.069)AT(0.142)KK 111.88 0.0091612 58702000 5456.1 5789.4 5742.7 5723.1 5540.6 5082 5155.1 6065.8 5259.7 4315.6 TRUE FALSE 4992.030044 5412.509008 5352.901524 6163.894154 5319.90617 5369.738448 4811.212685 6012.76735 5806.464637 4850.249109 1.029231681 1.115923922 1.10363435 1.270840737 1.096831534 1.107105703 0.991951666 1.239682172 1.197147715 1 12.24384313 -4.681027702 2.269721723 1.132604169 0.983907334 0.096100205 0.086524443 2.157507262 10.28968055 0.022874468 0.714721658 2.08E-05 4.681027702 -0.148696835 EFTGS(ph)PPSSATKK ddPTM_A459_MK2206_30min_R2 2 EFTGSPPSSATKK 13 1 C9J3F6;Q92609;Q92609-2 C9J3F6;Q92609 TBC1D5 TBC1 domain family member 5 1 EFT(0.002)GS(0.88)PPS(0.043)S(0.043)AT(0.032)KK;EFT(0.002)GS(0.904)PPS(0.073)S(0.02)AT(0.001)KK 137.93 0.001822 59324000 70610 90661 75571 92487 92539 70361 93278 82934 94136 92076 TRUE FALSE 76015.95589 86158.90657 78090.49942 84930.51625 88905.45389 73038.63716 81030.48655 93773.75856 102323.7791 89071.56766 0.853425598 0.967299766 0.876716347 0.953508718 0.998135053 0.819999457 0.909723368 1.052791155 1.148781612 1 16.44267737 -7.808426386 4.857894605 1.080906508 0.913246809 0.581529477 0.060608753 0.135142889 6.900104934 0.033198508 0.015842976 1.55E-08 7.808426386 -0.167659699 EFTRNRKS(ph)QS(ph)DS(ph)PPASPS(ph)PT(ph)AK ddPTM_A459_MK2206_30min_R1 1 EFTRNRKSQSDSPPASPSPTAK 22 3 E1CKY7 E1CKY7 sm-M20 5 EFT(0.412)RNRKS(0.856)QS(0.848)DS(0.848)PPAS(0.295)PS(0.87)PT(0.87)AK 42.711 0.045945 0 0 232.77 159.63 190.04 0 53.932 175.49 67.686 0 201.44 TRUE FALSE 0 217.6166307 148.7947604 204.6769137 0 56.98558323 163.7833823 67.09422844 0 226.395908 0 0.961221573 0.657232552 0.904066313 0 0.251707656 0.723437909 0.296357956 0 1 7.822704072 -10.77360713 3.930399735 1.000547237 0.44635576 0.190769727 0.354106893 324827184.5 611771031 2504835.415 0.089865505 1.68E-11 10.77360713 -0.554191477 EFVAVTGAEEDR ddPTM_A459_MK2206_30min_R2 2 EFVAVTGAEEDR 12 0 Q9UNZ2-4;Q9UNZ2;Q9UNZ2-5;F2Z2K0;R4GNE6;G3V4V8;R4GMY2 Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 0 ; 146.71 0.0089906 5955200 26816 28739 31828 28413 25732 28079 28880 19527 25012 32151 FALSE TRUE 28869.05358 27311.86305 32889.12963 26091.56701 24721.63239 29147.56602 25088.02131 22079.24595 27187.49855 31101.9155 0.928208218 0.878140867 1.057463153 0.838905469 0.794858837 0.937163051 0.806639106 0.709899876 0.874142255 1 14.92471582 -5.894746557 24.99384587 0.838870127 0.947170416 0.221143112 0.085887598 13.52460466 3177.624282 0.023786341 0.035280848 1.27E-06 5.894746557 0.108300289 EFVISDR ddPTM_A459_MK2206_30min_R1 4 EFVISDR 7 0 Q14019;H3BT58 Q14019 COTL1 Coactosin-like protein 0 ;;; 157.21 0.017556 44066900 14801.9 13674 15006.3 11986.9 15625.7 14175.5 17894.3 12931.6 14032 14640.9 FALSE TRUE 13542.92068 12783.82011 13987.71417 12910.13311 15003.29528 14978.10456 16700.6039 12818.54038 15490.67661 16454.72523 0.823041436 0.776908757 0.850072789 0.784585153 0.911792514 0.910261603 1.014942739 0.779018805 0.94141205 1 14.00621431 -6.274410648 20.0010053 0.918825455 0.809343328 0.453942991 0.062863496 52.92966814 81613.99298 0.018942359 0.021709304 5.32E-07 6.274410648 -0.109482127 EFVISDR ddPTM_A459_MK2206_30min_R2 2 EFVISDR 7 0 Q14019;H3BT58 Q14019 COTL1 Coactosin-like protein 0 ; 157.21 0.017556 28042000 129395 139419 129112 149990 123857 151873 167269 126676 124481 143506 FALSE TRUE 139301.5807 132495.6552 133416.5296 137735.3372 118993.7518 157652.6334 145306.3794 143232.9881 135308.1324 138823.411 1.003444446 0.954418669 0.961052093 0.992162174 0.857159113 1.135634345 1.046699388 1.03176393 0.974678056 1 17.08289136 -6.762989166 24.9999979 1.040299387 0.956241257 0.382078652 0.053380703 45.89966319 740409.6308 0.018236366 0.016946207 1.73E-07 6.762989166 -0.084058131 EFVS(ph)SDESSSGENK ddPTM_A459_MK2206_30min_R1 1 EFVSSDESSSGENK 14 0 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 EFVS(0.5)S(0.5)DESSSGENK 307.43 8.71E-94 4486800 1216.7 1736.1 1654.1 1367 1372.4 1380.4 1295.5 1301.3 1643.1 1638.1 TRUE FALSE 1113.213276 1623.079574 1541.824301 1472.286577 1317.734402 1458.557055 1209.079559 1289.922871 1813.906125 1841.040195 0.604665384 0.88161007 0.837474546 0.799703657 0.715755368 0.792246176 0.656737187 0.700648946 0.985261555 1 10.84630541 -8.271282307 23.45703943 0.992630947 0.755001701 0.600847734 0.079420968 232.7583272 554680.442 0.074252836 0.020243886 5.35E-09 8.271282307 -0.237629246 EFVSPS(ph)LTPPPAIAHPALPTIPER ddPTM_A459_MK2206_30min_R2 1 EFVSPSLTPPPAIAHPALPTIPER 24 0 O94763-2;O94763-3;O94763 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 EFVS(0.038)PS(0.481)LT(0.481)PPPAIAHPALPTIPER 82.761 0.00018759 6176000 29068 24767 22287 27477 22338 22120 28303 21810 24100 26743 TRUE FALSE 31293.46843 23537.10679 23030.03746 25232.04121 21460.89788 22961.7921 24586.7821 24660.64188 26196.17444 25870.3781 1.209625476 0.909809153 0.89020877 0.975325568 0.82955486 0.887570797 0.950383562 0.953238557 1.012593412 1 14.65901352 -4.75912454 24.99977165 0.928510492 1.209625841 0.702625511 0.053616504 34.23261052 369622.205 0.013582875 0.088162677 1.74E-05 4.75912454 0.281115349 EFVSPSLT(ph)PPPAIAHPALPTIPER ddPTM_A459_MK2206_30min_R2 1 EFVSPSLTPPPAIAHPALPTIPER 24 0 O94763-2;O94763-3;O94763 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 EFVS(0.014)PS(0.234)LT(0.752)PPPAIAHPALPTIPER 86.761 0.00012562 5628500 22201 23920 23670 21627 19528 20021 22348 20198 17199 24359 TRUE FALSE 23900.72563 22732.16758 24459.14599 19860.00492 18761.2326 20782.91318 19413.68076 22837.94795 18694.93793 23564.16782 1.014282609 0.964692144 1.03798047 0.842805274 0.796176328 0.881971022 0.823864475 0.969181179 0.79336296 1 14.52430711 -5.764750734 24.99897738 0.86638652 1.001555792 0.455571855 0.066434905 70.4211012 531648.0769 0.017539174 0.027263427 1.72E-06 5.764750734 0.135169272 EFVSPSLT(ph)PPPAIAHPALPTIPERK ddPTM_A459_MK2206_30min_R1 1 EFVSPSLTPPPAIAHPALPTIPERK 25 1 O94763-2;O94763-3;O94763 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 EFVS(0.038)PS(0.111)LT(0.851)PPPAIAHPALPTIPERK 51.044 0.017634 7148800 2389.2 2174.4 2500.6 2600.9 2294 2178 1752.9 2046.2 1715.5 1344.7 TRUE FALSE 2185.985994 2032.846165 2330.866239 2801.221769 2202.625122 2301.316478 1635.967239 2028.310289 1893.832364 1511.291588 1.446435626 1.345105194 1.542300809 1.853528327 1.457445499 1.522748155 1.082496093 1.34210387 1.253121753 1 10.56156632 -7.246888464 23.39382089 1.197939104 1.531866904 0.572626746 0.150900853 281.75849 452989.5017 0.060856015 0.046879758 5.66E-08 7.246888464 0.333927801 EFVSPSLT(ph)PPPAIAHPALPTIPERK ddPTM_A459_MK2206_30min_R2 2 EFVSPSLTPPPAIAHPALPTIPERK 25 1 O94763-2;O94763-3;O94763 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 EFVS(0.194)PS(0.194)LT(0.613)PPPAIAHPALPTIPERK;EFVS(0.009)PS(0.081)LT(0.909)PPPAIAHPALPTIPERK 68.676 0.00084306 6587500 38517 58281 51759 55328 57071 48895 46607 39745 52685 44067 TRUE FALSE 41465.89113 55386.85029 53484.61923 50807.52541 54830.10578 50755.73349 40487.44491 44939.80796 57267.44607 42629.0974 0.972713326 1.299273352 1.25465052 1.191850837 1.286213153 1.190635894 0.949760783 1.054205008 1.343388661 1 15.37955089 -7.027986383 24.42336502 1.088333194 1.211836383 0.152335207 0.128768213 981.5106654 856548.7473 0.048403444 0.037589101 9.38E-08 7.027986383 0.123503189 EGAAGS(ph)PGGPR ddPTM_A459_MK2206_30min_R1 2 EGAAGSPGGPR 11 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6;P53814-2;H7BZZ8;B5MCI0 A0A087WVP4 SMTN Smoothelin 1 EGAAGS(1)PGGPR;EGAAGS(1)PGGPR 132.17 0.0020626 11167000 8173.3 7066.8 6588.5 5935.7 6892.7 5804 7496.9 7060.4 2568.2 4997.3 TRUE FALSE 7478.117915 6606.750036 6141.290977 6392.868642 6618.149163 6132.617464 6996.79548 6998.671667 2835.17358 5616.403252 1.331478097 1.176331139 1.093456203 1.13824958 1.178360753 1.091911885 1.245778689 1.246112744 0.504802354 1 12.45543081 -8.245641455 24.9985821 0.752401159 1.180970865 0.638905968 0.13082436 405.4850529 641640.9019 0.082909701 0.031105412 5.68E-09 8.245641455 0.428569706 EGAAGS(ph)PGGPR ddPTM_A459_MK2206_30min_R2 1 EGAAGSPGGPR 11 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6;P53814-2;H7BZZ8;B5MCI0 A0A087WVP4 SMTN Smoothelin 1 EGAAGS(1)PGGPR 89.356 0.029351 11801000 16238 24816 22757 16955 22025 22741 23082 16962 20573 20266 TRUE FALSE 17481.19376 23583.67353 23515.70702 15569.72226 21160.18783 23606.42469 20051.30567 19178.99164 22362.40235 19604.72208 0.891682815 1.20295883 1.199491986 0.794182249 1.079341383 1.204119324 1.022779389 0.978284291 1.140664084 1 14.25891357 -10.99542335 3.165095648 0.998731054 1.059460897 0.016217462 0.132126089 97030288.23 137234570.8 1108639.874 0.032874235 1.01E-11 10.99542335 0.060729843 EGALCEENMR ddPTM_A459_MK2206_30min_R1 1 EGALCEENMR 10 0 P13639 P13639 EEF2 Elongation factor 2 0 137.95 0.023406 18990000 1665.8 1598.2 1724.4 1694 1992.6 1702.7 2058.6 1917.9 1696.6 1645.4 FALSE TRUE 1524.114963 1494.15689 1607.352532 1824.472174 1913.230523 1799.105403 1921.27455 1901.132003 1872.967641 1849.244574 0.824182471 0.807982303 0.869194132 0.986604043 1.034601128 0.972886674 1.038951027 1.028058716 1.012828518 1 10.85272033 -5.706728153 2.534214073 1.015510601 0.817113048 0.952448077 0.018430694 0.051332201 0.669041304 0.005340505 0.010197814 1.96E-06 5.706728153 -0.198397553 EGALCEENMR ddPTM_A459_MK2206_30min_R2 2 EGALCEENMR 10 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 145.46 0.012469 55745000 112587 142719 113153 137441 136536 155030 142563 103905 127076 110497 FALSE TRUE 121206.7473 135631.782 116925.4645 126211.6306 131174.9106 160929.7753 123844.3069 117485.7403 138128.8408 106891.4919 1.133923244 1.268873505 1.093870639 1.180745337 1.227178218 1.505543354 1.158598356 1.099112176 1.292234193 1 16.7057875 -10.92172221 3.062393814 0.996861555 1.21806349 0.243816058 0.115061857 57999296.2 69018081.32 1586488.003 0.030047427 1.20E-11 10.92172221 0.221201935 EGAQFS(ph)SHLINLLNPK ddPTM_A459_MK2206_30min_R1 1 EGAQFSSHLINLLNPK 16 0 Q9Y263;H0YBW4 Q9Y263 PLAA Phospholipase A-2-activating protein 1 EGAQFS(0.782)S(0.218)HLINLLNPK 49.988 0.045047 744040 981.98 671.79 616.78 449.36 601.91 537.93 889.81 970.68 698.6 739.12 TRUE FALSE 898.4574444 628.0563489 574.914692 483.9697851 577.9346501 568.3871317 830.4523985 962.1934471 771.22197 830.6877657 1.081582613 0.756067893 0.692094811 0.582613354 0.695730302 0.684236792 0.99971666 1.1583094 0.928413782 1 9.698162496 -7.318900068 5.706793969 1.038695908 0.736614831 0.498540346 0.133547062 0.182136684 12.84411703 0.05880064 0.039547466 4.80E-08 7.318900068 -0.302081077 EGAS(ph)PVTEVR ddPTM_A459_MK2206_30min_R1 1 EGASPVTEVR 10 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 EGAS(0.995)PVT(0.005)EVR 94.82 0.023427 8010700 2597.8 3986.9 3298.6 3384.2 2042.1 2090.8 2827.6 2615.5 3490.4 3985 TRUE FALSE 2376.843468 3727.352085 3074.700222 3644.85167 1960.758833 2209.179289 2638.975963 2592.632959 3853.239571 4478.691885 0.530700376 0.832241239 0.68651747 0.81382059 0.437797215 0.493264405 0.589229184 0.578881742 0.860349332 1 12.1288617 -8.442589469 3.488870935 0.997073007 0.625088205 0.522203818 0.121759911 0.186054639 4.336047821 0.125269486 0.033180358 3.61E-09 8.442589469 -0.371984802 EGAS(ph)PVTEVR ddPTM_A459_MK2206_30min_R2 1 EGASPVTEVR 10 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 EGAS(0.988)PVT(0.012)EVR 105.2 0.012654 17042000 95079 76111 71540 81861 71570 90807 89702 66030 54949 85513 TRUE FALSE 102358.3213 72331.43842 73925.10789 75172.69444 68759.80219 94262.72402 77924.01965 74660.34771 59728.36469 82722.71781 1.237366519 0.874384212 0.893649409 0.908730956 0.83120821 1.139502261 0.941990564 0.902537413 0.722030976 1 16.33599596 -4.757096714 24.88638268 0.914366265 1.237367026 0.474890591 0.102415836 112.4660995 644418.4432 0.025769149 0.196940048 1.75E-05 4.757096714 0.323000761 EGCTSETPHALT(ph)VSPFK ddPTM_A459_MK2206_30min_R2 1 EGCTSETPHALTVSPFK 17 0 A0A1B0GUA8;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2;Q9H1H9;H0Y9Z7;H0Y307 A0A1B0GUA8 KIF13A Kinesin-like protein KIF13A 1 EGCT(0.001)S(0.001)ET(0.001)PHALT(0.598)VS(0.399)PFK 92.474 0.010663 4035900 16966 21644 18248 24774 28243 23163 31845 19999 18162 22701 TRUE FALSE 18264.93 20569.19043 18856.37921 22749.88495 27134.03791 24044.4842 27663.71325 22612.93797 19741.69793 21960.26823 0.83172618 0.93665479 0.858658875 1.035956606 1.235596835 1.094908493 1.259716546 1.029720481 0.898973443 1 14.42260806 -5.877173471 4.47450277 1.099980864 0.882396683 0.451910722 0.102942027 0.194364247 6.680608827 0.030546463 0.046803118 1.33E-06 5.877173471 -0.217584181 EGCTSETPHALTVS(ph)PFK ddPTM_A459_MK2206_30min_R2 2 EGCTSETPHALTVSPFK 17 0 A0A1B0GUA8;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2;Q9H1H9;H0Y9Z7;H0Y307 A0A1B0GUA8 KIF13A Kinesin-like protein KIF13A 1 EGCTSETPHALT(0.053)VS(0.947)PFK;EGCTSETPHALT(0.102)VS(0.898)PFK 121.77 0.00093577 6933100 38573.5 50529 38765.6 59041.8 68377 55013 73710 47213.2 45448.3 46267.9 TRUE FALSE 41526.71682 48019.80334 40058.02576 54217.89607 65692.17541 57106.55826 64031.78846 53384.12735 49401.31098 44758.18221 0.927801684 1.072872064 0.894987772 1.21135161 1.467713213 1.27589092 1.430616377 1.192723312 1.1037381 1 15.44986382 -5.866604533 5.608917133 1.27141246 0.977564243 0.446931133 0.138236329 0.176456615 8.108985737 0.038980146 0.058824276 1.36E-06 5.866604533 -0.293848216 EGDELEDNGKNFY(ph)ESDDDQKEK ddPTM_A459_MK2206_30min_R1 1 EGDELEDNGKNFYESDDDQKEK 22 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 EGDELEDNGKNFY(0.969)ES(0.031)DDDQKEK 61.276 0.037726 12841000 792.12 1110.6 1382.1 1081.2 438.05 525.23 616.86 758.86 1127.6 900.66 TRUE FALSE 724.7460344 1038.299738 1288.286903 1164.474211 420.6015409 554.9680687 575.7103949 752.225367 1244.818055 1012.24056 0.715982013 1.025744056 1.272708241 1.150392759 0.4155154 0.548257095 0.568748593 0.743129051 1.229765042 1 9.983336474 -6.236218934 24.98551421 0.718818974 1.05663813 0.22904848 0.256281587 1072.036904 1062050.728 0.079354215 0.10240728 5.80E-07 6.236218934 0.337819156 EGDELEDNGKNFY(ph)ESDDDQKEK ddPTM_A459_MK2206_30min_R2 1 EGDELEDNGKNFYESDDDQKEK 22 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 EGDELEDNGKNFY(0.897)ES(0.103)DDDQKEK 83.723 0.0021097 6381500 29446 32302 41046 29790 39275 19341 37479 25654 29343 39884 TRUE FALSE 31700.4084 30697.92965 42414.45315 27356.06171 37732.86616 20077.03531 32557.96228 29007.06588 31895.2011 38582.58835 0.821624721 0.795642049 1.099315908 0.709026089 0.977976538 0.520365174 0.843851169 0.75181752 0.826673442 1 15.23566231 EGDELEDNGKNFYES(ph)DDDQKEK ddPTM_A459_MK2206_30min_R1 1 EGDELEDNGKNFYESDDDQKEK 22 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 EGDELEDNGKNFY(0.15)ES(0.85)DDDQKEK 53.453 0.012331 18274000 2087.2 3265.6 3691.9 3042.1 1348 1154.8 1459.1 2032.1 2150.5 1733.4 TRUE FALSE 1909.67268 3053.008846 3441.304114 3276.403069 1294.306306 1220.183778 1361.766101 2014.333564 2374.052171 1948.146679 0.980250974 1.567135001 1.766450213 1.681805125 0.664378263 0.626330549 0.699005941 1.033974282 1.218620855 1 10.92788659 -6.259826049 24.99894275 0.854312014 1.522893527 0.578780273 0.26065033 107.8399583 1671005.189 0.084585299 0.103512947 5.50E-07 6.259826049 0.668581512 EGDELEDNGKNFYES(ph)DDDQKEK ddPTM_A459_MK2206_30min_R2 1 EGDELEDNGKNFYESDDDQKEK 22 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 EGDELEDNGKNFY(0.084)ES(0.916)DDDQKEK 53.554 0.012063 23703000 50161 65802 62035 49584 59442 28791 67299 52685 49049 74209 TRUE FALSE 54001.36473 62534.36837 64103.21594 45532.82859 57108.00841 29886.66168 58462.56046 59571.11039 53315.19336 71787.56641 0.752238409 0.871103054 0.892957084 0.634271795 0.795513921 0.416320864 0.814382816 0.829824904 0.742680049 1 16.13144637 -10.10524011 6.737530355 1 0.750066268 0.246033845 0.131333494 9.66E-11 0 0.131078186 0.03179113 7.85E-11 10.10524011 -0.249933732 EGDIIPPLTGAT(ph)PPLIGHLK ddPTM_A459_MK2206_30min_R1 1 EGDIIPPLTGATPPLIGHLK 20 0 A6NNK5;Q12888;Q12888-3;Q12888-2;H7C3N7 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 EGDIIPPLT(0.006)GAT(0.994)PPLIGHLK 160.69 1.16E-06 14158000 7896.3 7768.6 7786.9 6298.9 8087.2 7076.7 7878.9 7523.5 6782.1 6429.6 TRUE FALSE 7224.67822 7262.862728 7258.346924 6784.042369 7765.069699 7477.376638 7353.312957 7457.722833 7487.123565 7226.147389 0.999796687 1.005080901 1.004455975 0.93881871 1.074579479 1.034766693 1.017597976 1.032046875 1.036115535 1 12.81901097 -6.269208418 24.99923685 1.033486559 0.989570978 0.442473357 0.024930963 575.5210922 1851913.001 0.007669622 0.008851013 5.38E-07 6.269208418 -0.043915581 EGDPVSLSTPLET(ph)EFGSPSELS(ph)PR ddPTM_A459_MK2206_30min_R1 1 EGDPVSLSTPLETEFGSPSELSPR 24 0 E9PMR3;E9PMG4;Q9BUR4 E9PMR3 WRAP53 Telomerase Cajal body protein 1 2 EGDPVSLS(0.001)T(0.005)PLET(0.858)EFGS(0.132)PS(0.219)ELS(0.785)PR 90.435 0.00017556 994080 539.76 413.66 471.55 495.18 306.22 441.98 484.14 326.37 335.5 382.22 TRUE FALSE 493.8505776 386.7306588 439.5424998 533.3188494 294.022609 467.0045256 451.843904 323.5165815 370.3764256 429.5722992 1.149633201 0.90026908 1.023209599 1.241511267 0.684454304 1.087138362 1.051845998 0.753113229 0.862198113 1 8.746757155 -6.757973113 0.75506802 0.89065695 1.04631898 0.112156158 0.156230504 1.571844644 1.966304479 0.110751634 0.109248853 1.75E-07 6.757973113 0.15566203 EGDPVSLSTPLETEFGS(ph)PSELSPR ddPTM_A459_MK2206_30min_R1 2 EGDPVSLSTPLETEFGSPSELSPR 24 0 E9PMR3;E9PMG4;Q9BUR4 E9PMR3 WRAP53 Telomerase Cajal body protein 1 1 EGDPVSLSTPLETEFGS(0.977)PS(0.023)ELSPR;EGDPVSLSTPLETEFGS(0.635)PS(0.362)ELS(0.002)PR 231.72 5.22E-39 19390900 7125.4 6409.7 6555 5511.8 6819.7 6382.6 6733.7 6881 5818.3 4974.5 TRUE FALSE 6519.347313 5992.427365 6110.064863 5936.319791 6548.056908 6743.977296 6284.507159 6820.840142 6423.133106 5590.778616 1.166089334 1.07184129 1.092882635 1.061805555 1.171224503 1.206267992 1.124084424 1.220016139 1.148879887 1 12.4488335 -6.274037596 24.17840257 1.158089373 1.095898597 0.097694543 0.062641012 809.1711253 1552951.03 0.018247264 0.020837889 5.32E-07 6.274037596 -0.062190776 EGDPVSLSTPLETEFGSPSELS(ph)PR ddPTM_A459_MK2206_30min_R1 4 EGDPVSLSTPLETEFGSPSELSPR 24 0 E9PMR3;E9PMG4;Q9BUR4 E9PMR3 WRAP53 Telomerase Cajal body protein 1 1 EGDPVSLSTPLETEFGSPS(0.022)ELS(0.978)PR;EGDPVSLSTPLETEFGS(0.006)PS(0.17)ELS(0.824)PR;EGDPVSLSTPLETEFGS(0.003)PS(0.037)ELS(0.96)PR;EGDPVSLSTPLETEFGSPS(0.007)ELS(0.993)PR 254.09 4.22E-53 53621900 10945 11136.1 10439.5 10186.8 11751.1 10467 11434.1 11138.4 10136.4 8088.6 TRUE FALSE 10014.07028 10411.13787 9730.895826 10971.3891 11283.0288 11059.63249 10671.35205 11041.01814 11190.11505 9090.676834 1.101575874 1.145254425 1.070425888 1.206883635 1.241164878 1.216590656 1.173878716 1.214543025 1.230944104 1 13.150172 -5.773238816 24.99907245 1.195758025 1.109702297 0.201243837 0.067737022 278.3281601 589684.9237 0.017742699 0.026556207 1.69E-06 5.773238816 -0.086055728 EGDPVSLSTPLETEFGSPSELS(ph)PR ddPTM_A459_MK2206_30min_R2 1 EGDPVSLSTPLETEFGSPSELSPR 24 0 E9PMR3;E9PMG4;Q9BUR4 E9PMR3 WRAP53 Telomerase Cajal body protein 1 1 EGDPVSLSTPLETEFGS(0.003)PS(0.187)ELS(0.81)PR 98.978 0.00034503 0 5337.8 6598.9 6553.5 5931.5 5988.3 5899.4 7198.7 6184.9 4683 5550.6 TRUE FALSE 5746.466072 6271.208222 6771.990419 5446.877476 5753.169253 6123.905801 6253.502043 6993.287666 5090.318875 5369.484377 1.070208174 1.167934904 1.26119939 1.014413507 1.071456559 1.140501652 1.164637348 1.302413263 0.948008881 1 12.39056784 -8.295412211 24.99272365 0.974004321 1.146614614 0.416906018 0.082785869 732.9813051 539224.4234 0.08191664 0.021155119 5.07E-09 8.295412211 0.172610293 EGDVLTLLES(ph)ER ddPTM_A459_MK2206_30min_R1 1 EGDVLTLLESER 12 0 P62857 P62857 RPS28 40S ribosomal protein S28 1 EGDVLT(0.001)LLES(0.999)ER 96.756 0.016828 755770 430.82 720.07 713.26 513.93 742.96 459.38 656.19 616.27 403.53 530.88 TRUE FALSE 394.1764967 673.1933121 664.8458985 553.5129776 713.36633 485.3896986 612.4167624 610.8820164 445.4783875 596.6494223 0.660650094 1.128289557 1.114299073 0.927702193 1.195620583 0.8135258 1.026426473 1.023854199 0.746633401 1 9.220739675 -6.797531344 24.99929597 0.9301002 1.013888403 0.060409966 0.160812392 563.7665242 390492.1412 0.055131939 0.048623304 1.59E-07 6.797531344 0.083788203 EGDVLTLLESER ddPTM_A459_MK2206_30min_R1 4 EGDVLTLLESER 12 0 P62857 P62857 RPS28 40S ribosomal protein S28 0 ;;; 238.86 4.18E-12 46240100 9624.1 9001.3 8833.2 8231 10956.2 9328.1 10239.5 8856.3 7419.7 6888.25 FALSE TRUE 8805.519757 8415.313734 8233.626995 8864.953046 10519.79135 9856.248961 9556.441638 8778.870303 8191.004367 7741.618414 1.137426218 1.087022543 1.063553711 1.145103333 1.358862035 1.273150966 1.234424267 1.133983856 1.058048063 1 12.91841948 -8.280615884 2.347715612 1.00669104 1.185309108 0.360265302 0.083406538 0.377022694 3.82480502 0.09067312 0.025975926 5.24E-09 8.280615884 0.178618069 EGDVLTLLESER ddPTM_A459_MK2206_30min_R2 5 EGDVLTLLESER 12 0 P62857 P62857 RPS28 40S ribosomal protein S28 0 ;;;; 201.09 0.0011733 42324300 64379.2 74984.7 84043.4 100238.8 80818.2 84811 80031.9 65992.1 72449.1 76853.5 FALSE TRUE 69308.12105 71261.06884 86845.36501 92048.96939 77644.87139 88038.54203 69523.61539 74617.49405 78750.59176 74345.77659 0.932240192 0.958508635 1.168127754 1.238119684 1.044375013 1.184176776 0.935138734 1.00365478 1.059247685 1 16.18196317 -7.273111469 24.94941769 0.999814872 1.090262514 0.172826789 0.094292353 1482.114925 3168049.908 0.04257757 0.028988421 5.33E-08 7.273111469 0.090447642 EGDYVLFHHEGGVDVGDVDAK ddPTM_A459_MK2206_30min_R1 1 EGDYVLFHHEGGVDVGDVDAK 21 0 P53396;P53396-2 P53396 ACLY ATP-citrate synthase 0 84.113 0.013383 0 1466.2 1264.3 1336.4 1305.6 971.51 1345.2 1589 1146 1226.9 1287.6 FALSE TRUE 1341.491991 1181.99384 1245.688891 1406.157538 932.8126995 1421.364062 1483.000709 1135.980643 1354.440646 1447.117609 0.927009652 0.81679183 0.860806947 0.97169541 0.644600476 0.982203556 1.024796257 0.784995384 0.935957546 1 10.49896646 EGEDGDQPT(ph)TPPKPLK ddPTM_A459_MK2206_30min_R1 3 EGEDGDQPTTPPKPLK 16 1 P18858-3;P18858;M0R0Q7;P18858-2;B4E135 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 EGEDGDQPT(0.572)T(0.428)PPKPLK;EGEDGDQPT(0.676)T(0.324)PPKPLK;EGEDGDQPT(0.665)T(0.335)PPKPLK 87.411 0.020419 267899000 25950.2 29409.5 28780.6 20419.7 16053.2 17631.3 25042.9 21610.1 33015.4 38906 TRUE FALSE 23742.99922 27494.9362 26827.05306 21992.42883 15413.76705 18629.56897 23372.33383 21421.16517 36447.46898 43725.96901 0.542995381 0.628801072 0.613526782 0.502960354 0.352508301 0.426052741 0.534518374 0.489895722 0.833542854 1 15.41620274 -8.409869756 3.035630576 0.996342159 0.51004161 0.819235869 0.077884604 0.108073238 1.887089748 0.085946618 0.023116456 3.89E-09 8.409869756 -0.486300549 EGEDGDQPT(ph)TPPKPLK ddPTM_A459_MK2206_30min_R2 1 EGEDGDQPTTPPKPLK 16 1 P18858-3;P18858;M0R0Q7;P18858-2;B4E135 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 EGEDGDQPT(0.5)T(0.5)PPKPLK 152.11 0.0018822 8115700 87336 61776 74667 65373 51286 38774 71680 62063 41394 80900 TRUE FALSE 94022.51131 58708.29367 77156.36051 60031.81678 49272.25395 40249.57174 62268.3299 70174.84719 44994.3753 78260.23963 1.201408426 0.750167569 0.985894764 0.767079389 0.629594979 0.514304223 0.795657286 0.896685821 0.574932757 1 16.25599191 -1.610855762 0.914500887 0.737175731 200 0.391695643 0.157654842 865.349648 2.127694403 0.052193021 359628.3368 0.024498768 1.610855762 199.2628243 EGEDGDQPTT(ph)PPKPLK ddPTM_A459_MK2206_30min_R1 1 EGEDGDQPTTPPKPLK 16 1 P18858-3;P18858;M0R0Q7;P18858-2;B4E135 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 EGEDGDQPT(0.3)T(0.7)PPKPLK 155.06 0.0045638 0 1647.2 1991.9 2035.1 1769.8 1570.9 1156.4 1848.8 1554.7 2555.6 2530.8 TRUE FALSE 1507.09699 1862.226948 1896.963082 1906.110303 1508.327727 1221.874369 1725.469925 1541.107422 2821.263765 2844.334611 0.529859245 0.654714442 0.666926836 0.67014278 0.530291943 0.429581795 0.606633945 0.541816499 0.991888843 1 11.47387548 -8.265143602 24.90597967 0.995944507 0.581606469 0.84485505 0.071503842 124.3820684 836283.9817 0.066624115 0.019805211 5.43E-09 8.265143602 -0.414338038 EGEEPTVYS(ph)DEEEPK ddPTM_A459_MK2206_30min_R2 2 EGEEPTVYSDEEEPK 15 0 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 EGEEPT(0.002)VYS(0.998)DEEEPK;EGEEPT(0.006)VYS(0.994)DEEEPK 271.43 5.18E-45 17052200 203257 51996 68111 58888 48598 44640 123699 65311 47550 82184 TRUE FALSE 218818.5122 49413.95425 70381.78675 54076.66203 46689.79833 46338.80648 107457.1727 73847.37195 51685.81305 79502.34281 2.752353006 0.621540857 0.885279405 0.680189541 0.587275754 0.582860892 1.351622718 0.928870387 0.650116855 1 16.27870975 -4.758082734 24.9997511 0.808730173 2.752355707 0.865368447 0.229867414 33.5263825 249659.1119 0.059688645 0.420601386 1.75E-05 4.758082734 1.943625534 EGEEPTVYS(ph)DEEEPKDESAR ddPTM_A459_MK2206_30min_R1 4 EGEEPTVYSDEEEPKDESAR 20 1 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 EGEEPT(0.004)VYS(0.996)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPT(0.003)VYS(0.997)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR 186.7 6.92E-16 626244000 13401.3 15506.1 10684.8 11716.8 9612.3 8334.6 10651.1 10146.8 17446.7 13815.1 TRUE FALSE 12261.44906 14496.65007 9959.545546 12619.22997 9229.421737 8806.497849 9940.584553 10058.0876 19260.3469 15526.61889 0.789705032 0.93366432 0.641449733 0.812748098 0.594425728 0.567187094 0.640228541 0.647796386 1.240472703 1 13.92245608 -8.25593473 24.99994578 1.120236368 0.702377269 0.660801173 0.119456594 254.9325011 1157816.491 0.090817894 0.03210812 5.55E-09 8.25593473 -0.417859099 EGEEPTVYS(ph)DEEEPKDESAR ddPTM_A459_MK2206_30min_R2 5 EGEEPTVYSDEEEPKDESAR 20 1 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 EGEEPT(0.002)VY(0.001)S(0.997)DEEEPKDESAR;EGEEPT(0.089)VY(0.013)S(0.897)DEEEPKDESAR;EGEEPT(0.001)VYS(0.999)DEEEPKDESAR;EGEEPT(0.005)VYS(0.995)DEEEPKDESAR;EGEEPT(0.06)VY(0.084)S(0.856)DEEEPKDESAR 153.6 3.21E-06 1503319000 586183 221079.9 316015.9 225769.8 174019.7 184031.5 534360 207446.3 247832.4 321927 TRUE FALSE 631061.6212 210101.3936 326551.7124 207323.6851 167186.8122 191034.9477 464197.8901 234560.2437 269388.4142 311422.5484 2.026383846 0.67465055 1.048580824 0.66573113 0.536848771 0.613426833 1.490572512 0.753189661 0.865025399 1 18.24851388 -4.756380803 24.99925606 0.845388306 2.026385669 0.639993477 0.264720989 103.6459238 512155.9066 0.067409409 0.548883444 1.75E-05 4.756380803 1.180997362 EGEEPTVYS(ph)DEEEPKDESARK ddPTM_A459_MK2206_30min_R1 1 EGEEPTVYSDEEEPKDESARK 21 2 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 EGEEPT(0.037)VY(0.011)S(0.946)DEEEPKDES(0.005)ARK 49.577 0.026063 10879000 2389.9 2647.3 2664 2933.9 2746.4 1994.2 2632.8 2861.7 3205.3 2346.1 TRUE FALSE 2186.626455 2474.960289 2483.175102 3159.869486 2637.005072 2107.109881 2457.170716 2836.680459 3538.502405 2636.75258 0.82928769 0.938639563 0.941755067 1.198394385 1.000095759 0.799130679 0.931892789 1.075823526 1.341992583 1 11.36454649 -7.967445434 4.907977727 1.183863 0.955211639 0.33506312 0.12712204 0.206318603 12.21943793 0.078638123 0.034573587 1.08E-08 7.967445434 -0.228651361 EGES(ph)EMEGGSER ddPTM_A459_MK2206_30min_R2 1 EGESEMEGGSER 12 0 D6RD44;Q96EI5;Q96EI5-2;D6RCE9 D6RD44 TCEAL4 Transcription elongation factor A protein-like 4 1 EGES(1)EMEGGSER 117.03 0.0048666 1479900 7642.6 4529.8 3479.4 5933.1 5418.5 7682.5 6835.8 4279.6 4924.7 5658.3 TRUE FALSE 8227.723332 4304.856719 3595.401459 5448.346751 5205.742464 7974.862921 5938.251249 4838.958414 5353.041504 5473.670134 1.503145628 0.786466231 0.656853879 0.995373601 0.95105155 1.456949857 1.084875614 0.884042753 0.97796202 1 12.41829278 EGESEMEGGS(ph)ER ddPTM_A459_MK2206_30min_R2 1 EGESEMEGGSER 12 0 D6RD44;Q96EI5;Q96EI5-2;D6RCE9 D6RD44 TCEAL4 Transcription elongation factor A protein-like 4 1 EGESEMEGGS(1)ER 112.44 0.0063776 1114200 2786.8 2840.3 3195.9 2253.6 3300.7 3064.1 2164.9 3253.6 2770.7 3499 TRUE FALSE 3000.159551 2699.254832 3302.449711 2069.473671 3171.097933 3180.706473 1880.646029 3678.856691 3011.690478 3384.827917 0.886355119 0.797457034 0.975662513 0.611397011 0.93685647 0.939695178 0.555610529 1.086866683 0.88976177 1 11.72486677 -7.845724384 22.69971066 0.991233797 0.821738523 0.257004945 0.13792039 18.24296978 4908.849124 0.071875849 0.034527929 1.43E-08 7.845724384 -0.169495275 EGETQGVAFEHESPADFQNS(ph)QSPVQDQDK ddPTM_A459_MK2206_30min_R1 2 EGETQGVAFEHESPADFQNSQSPVQDQDK 29 0 E9PGM9;P78332;F8WCA5;P78332-3 E9PGM9 RBM6 RNA-binding protein 6 1 EGETQGVAFEHESPADFQNS(0.5)QS(0.5)PVQDQDK;EGETQGVAFEHESPADFQNS(0.879)QS(0.121)PVQDQDK 156.7 7.82E-19 16293800 2850.22 1321.59 2125.42 1365.94 2930.75 2638.64 3214.64 2703.03 1778.11 1238.67 TRUE FALSE 2607.793822 1235.554251 1981.152412 1471.144935 2814.012022 2788.037517 3000.197231 2679.397694 1962.950898 1392.125791 1.873245822 0.887530609 1.423113073 1.056761497 2.021377694 2.002719535 2.155119351 1.924680737 1.410038453 1 10.44307386 -6.264081505 24.93424087 1.831216351 1.288042617 0.2095025 0.402758321 283.5849118 2676241.894 0.117970308 0.139882489 5.44E-07 6.264081505 -0.543173734 EGETQGVAFEHESPADFQNS(ph)QSPVQDQDK ddPTM_A459_MK2206_30min_R2 2 EGETQGVAFEHESPADFQNSQSPVQDQDK 29 0 E9PGM9;P78332;F8WCA5;P78332-3 E9PGM9 RBM6 RNA-binding protein 6 1 EGETQGVAFEHESPADFQNS(0.5)QS(0.5)PVQDQDK;EGETQGVAFEHESPADFQNS(0.5)QS(0.5)PVQDQDK 151.19 5.74E-16 33025000 20057.1 48080 35921 57888 61159 52021 69171 36139 48496 35618 TRUE FALSE 21592.687 45692.41711 37118.58821 53158.36523 58757.59036 54000.69561 60088.76461 40862.49138 52714.09442 34455.78758 0.626678086 1.326117333 1.077281665 1.542799308 1.705303941 1.56724601 1.743938213 1.185939845 1.529905369 1 15.07245871 -4.555424517 1.105424746 1.48307677 9.26E-13 0.478426098 0.244048633 2.191231744 1.603229213 0.074641553 4.27248254 2.78E-05 4.555424517 -1.48307677 EGETQGVAFEHESPADFQNSQS(ph)PVQDQDK ddPTM_A459_MK2206_30min_R2 2 EGETQGVAFEHESPADFQNSQSPVQDQDK 29 0 E9PGM9;P78332;F8WCA5;P78332-3 E9PGM9 RBM6 RNA-binding protein 6 1 EGETQGVAFEHESPADFQNS(0.416)QS(0.584)PVQDQDK;EGETQGVAFEHESPADFQNS(0.161)QS(0.839)PVQDQDK 141.71 1.91E-14 12880900 17830.3 43332 27260 56272 60741 57304 54491 36137 46798 34659 TRUE FALSE 19195.40148 41180.19589 28168.83479 51674.39759 58356.00314 59484.74387 47336.26624 40860.22998 50868.40545 33528.07967 0.572517176 1.228230078 0.840156522 1.541227476 1.740511348 1.774176883 1.41183947 1.218686855 1.517188158 1 15.03308223 -5.762863695 24.99923872 1.489837761 0.915094059 0.50054246 0.262231079 30.92501201 542805.6111 0.073189117 0.115563388 1.73E-06 5.762863695 -0.574743702 EGFGLSENPFASLS(ph)PDEQKDEK ddPTM_A459_MK2206_30min_R1 1 EGFGLSENPFASLSPDEQKDEK 22 1 B4DT96;C9JYA1;O15504-2;O15504 B4DT96 NUPL2 Nucleoporin-like protein 2 1 EGFGLS(0.001)ENPFAS(0.229)LS(0.77)PDEQKDEK 57.738 0.011373 6006400 1169.7 1463.3 1206.2 1413.7 1042.8 975.15 1126.5 1152.2 956.5 1126 TRUE FALSE 1070.210873 1368.038904 1124.326505 1522.583419 1001.263068 1030.36215 1051.35324 1142.126437 1055.931598 1265.497381 0.845683989 1.081028633 0.888446331 1.203150194 0.791201217 0.814195403 0.830782628 0.902511893 0.834400461 1 10.30548881 -6.321284287 24.9999854 0.853338216 1.001745561 0.296578337 0.106878445 288.8133264 120649.8509 0.031098347 0.035262207 4.77E-07 6.321284287 0.148407345 EGFGLSENPFASLS(ph)PDEQKDEK ddPTM_A459_MK2206_30min_R2 2 EGFGLSENPFASLSPDEQKDEK 22 1 B4DT96;C9JYA1;O15504-2;O15504 B4DT96 NUPL2 Nucleoporin-like protein 2 1 EGFGLSENPFAS(0.086)LS(0.914)PDEQKDEK;EGFGLSENPFAS(0.038)LS(0.962)PDEQKDEK 90.762 0.00021555 6738400 45538 50174 48880 40344 44882 34080 52991 41084 37737 50596 TRUE FALSE 49024.42429 47682.43212 50509.6348 37047.76615 43119.70717 35376.93828 46033.21805 46453.81986 41019.29605 48945.05666 1.001621566 0.974203226 1.031966009 0.756925595 0.880981862 0.72278879 0.940508014 0.94910136 0.83806821 1 15.57887554 -5.739338432 24.99998935 0.864937538 0.999757612 0.359836942 0.080983002 259.5558642 293600.2374 0.021846754 0.037800712 1.82E-06 5.739338432 0.134820074 EGFLAESS(ph)PQTQR ddPTM_A459_MK2206_30min_R1 1 EGFLAESSPQTQR 13 0 K7ERF3;K7ELU8;D3DUE4;F6WF08;Q6ZW76-2;Q6ZW76 K7ERF3 ANKS3 Ankyrin repeat and SAM domain-containing protein 3 1 EGFLAES(0.253)S(0.706)PQT(0.041)QR 135.02 0.0011695 2275200 1181.4 1310.2 1015.5 1114.3 1278.7 1113.3 1398 1446.3 975.39 960.38 TRUE FALSE 1080.915726 1224.905742 946.5706893 1200.123579 1227.766671 1176.334084 1304.741971 1433.655152 1076.785281 1079.359125 1.001442153 1.134845404 0.876974741 1.111885332 1.137495985 1.089844943 1.20881173 1.328246659 0.997615396 1 10.07595924 -5.980289986 24.81775527 1.143742241 1.013624314 0.197392362 0.108051286 324.9967141 409214.5652 0.029870347 0.044298441 1.05E-06 5.980289986 -0.130117927 EGFLAESS(ph)PQTQR ddPTM_A459_MK2206_30min_R2 2 EGFLAESSPQTQR 13 0 K7ERF3;K7ELU8;D3DUE4;F6WF08;Q6ZW76-2;Q6ZW76 K7ERF3 ANKS3 Ankyrin repeat and SAM domain-containing protein 3 1 EGFLAES(0.045)S(0.954)PQTQR;EGFLAES(0.03)S(0.97)PQTQR 184 0.00012206 7803400 29455 33930 31242 38279 35613 35881 38907 28780 31223 33759 TRUE FALSE 31710.09745 32245.08554 32283.59269 35151.48325 34214.65468 37246.4766 33798.46416 32541.64482 33938.7201 32657.44659 0.970991328 0.987373138 0.988552262 1.076369616 1.047683094 1.140520172 1.034938971 0.996454047 1.039233732 1 14.99512437 -5.693932635 7.257506511 1.05098118 0.981972321 0.377279529 0.038495728 0.248290579 22.18878037 0.011110572 0.019265058 2.02E-06 5.693932635 -0.069008859 EGGEGFTVDT(ph)PAK ddPTM_A459_MK2206_30min_R2 1 EGGEGFTVDTPAK 13 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 EGGEGFT(0.059)VDT(0.941)PAK 110.92 0.012693 3668600 25479 27963 25566 29031 33452 20088 32530 21117 21886 32163 TRUE FALSE 27429.69183 26574.39808 26418.35768 26659.07443 32138.5064 20852.46292 28258.77192 23877.06441 23789.60472 31113.52394 0.881600293 0.85411084 0.849095645 0.856832369 1.03294331 0.670205759 0.90824723 0.767417553 0.764606567 1 14.92525418 -6.76246622 24.99999665 0.812943539 0.887988101 0.118698177 0.096716028 59.08108234 1438390.73 0.031526373 0.029389614 1.73E-07 6.76246622 0.075044562 EGGSKS(ph)DSEDITR ddPTM_A459_MK2206_30min_R1 2 EGGSKSDSEDITR 13 1 E9PDC4;F5GYS8;H0YNY8;U3KPR8;O00470;O00470-2 E9PDC4 MEIS1 Homeobox protein Meis1 1 EGGS(0.018)KS(0.798)DS(0.184)EDITR;EGGS(0.05)KS(0.926)DS(0.024)EDITR 177.63 0.00049616 16006500 4636.1 4723.1 4873 3943.6 4134.9 3717 4084.5 4413.4 4073 3798.5 TRUE FALSE 4241.77535 4415.625332 4542.234337 4247.336755 3970.198177 3927.453328 3812.030458 4374.814109 4496.402925 4269.086857 0.993602494 1.034325484 1.063982648 0.99490521 0.929987679 0.919975034 0.892938135 1.024765777 1.053247 1 12.0597118 -5.993325344 11.4337546 0.964782791 1.030771458 0.23328123 0.048519465 0.385961381 619.2028874 0.015137792 0.021977425 1.02E-06 5.993325344 0.065988668 EGHETPMDIDS(ph)DDSK ddPTM_A459_MK2206_30min_R2 2 EGHETPMDIDSDDSK 15 0 Q8TDB6 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 EGHETPMDIDS(0.996)DDS(0.004)K;EGHETPMDIDS(0.99)DDS(0.01)K 124.98 0.00083963 10635900 79007 76121 84851 75428 79490 67733 96393 73805 60811 96368 TRUE FALSE 85055.83667 72340.94183 87679.88999 69265.29112 76368.82319 70310.62678 83736.48331 83451.56691 66100.23086 93223.52005 0.912386023 0.775994532 0.940533998 0.743002314 0.81920124 0.754215532 0.898233442 0.895177171 0.709051008 1 16.50840637 -9.954144306 6.350281232 1 0.828521883 0.312641442 0.076705185 25405373.25 13274411.5 0.070453171 0.017613293 1.11E-10 9.954144306 -0.171478117 EGHLS(ph)PDIVAEQK ddPTM_A459_MK2206_30min_R1 3 EGHLSPDIVAEQK 13 0 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 1 EGHLS(1)PDIVAEQK;EGHLS(1)PDIVAEQK;EGHLS(1)PDIVAEQK 190.44 0.00016375 45521000 14719.8 15479.9 15366.9 12827 13291 12969.3 13933 12786.8 11987.2 10409.5 TRUE FALSE 13467.80371 14472.1557 14323.83764 13814.93776 12761.59133 13703.61056 13003.55499 12675.00636 13233.31234 11699.10745 1.151182154 1.237030753 1.224353029 1.180853995 1.090817516 1.171338123 1.111499749 1.083416527 1.131138627 1 13.51411085 -7.948765167 0.179766603 0.943074335 1.274430782 0.687994027 0.037629971 1.905595086 0.357569272 0.263634248 0.264888369 1.13E-08 7.948765167 0.331356447 EGHLS(ph)PDIVAEQK ddPTM_A459_MK2206_30min_R2 4 EGHLSPDIVAEQK 13 0 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 1 EGHLS(1)PDIVAEQK;EGHLS(1)PDIVAEQK;EGHLS(1)PDIVAEQK;EGHLS(1)PDIVAEQK 112.62 0.0039929 82632400 471704 629554 541087 629167 579988 489256 559620 505434 535883 515861 TRUE FALSE 507818.0209 598291.2638 559126.5705 577762.0435 557214.7569 507874.9799 486141.2218 571495.9592 582493.1347 499028.4978 1.017613269 1.198912019 1.120430142 1.157773646 1.116599071 1.017727409 0.97417527 1.14521708 1.167254249 1 18.92876268 -6.587445727 9.2734381 1.064647047 1.129863558 0.156406215 0.070584935 0.648523496 86.99864271 0.024024007 0.024021361 2.59E-07 6.587445727 0.065216511 EGHLSPDIVAEQK ddPTM_A459_MK2206_30min_R2 1 EGHLSPDIVAEQK 13 0 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 88.224 0.033836 8997800 39138 106620 63763 148370 155420 178890 146410 102250 134470 73181 FALSE TRUE 42134.43537 101325.4058 65888.8266 136247.6964 149317.4299 185697.7843 127186.1911 115614.4261 146165.9575 70793.10996 0.595177064 1.431289089 0.930723719 1.924589786 2.109208508 2.623105333 1.796589968 1.633131051 2.064691855 1 16.11132133 -5.765949711 24.90634741 1.942332807 1.030285779 0.467119258 0.432603637 88.457202 488470.499 0.118654623 0.182924615 1.71E-06 5.765949711 -0.912047028 EGIDPTPYYWYTDQR ddPTM_A459_MK2206_30min_R2 2 EGIDPTPYYWYTDQR 15 0 O43776 O43776 NARS "Asparagine--tRNA ligase, cytoplasmic" 0 ; 132.03 0.0091345 6156200 18531.4 19338.3 15521.1 20769.4 20713 20268.1 18056.4 15678.4 18695.6 22625.1 FALSE TRUE 19950.17823 18377.98814 16038.56573 19072.47358 19899.70355 21039.41675 15685.57299 17727.62071 20321.70949 21886.84484 0.911514582 0.839681931 0.732794784 0.871412655 0.909208417 0.961281395 0.716666706 0.809966939 0.928489677 1 14.41777637 -8.497832415 4.074656483 0.999449197 0.84344249 0.324546996 0.072927969 0.224210921 9.544529414 0.073868819 0.019354669 3.18E-09 8.497832415 -0.156006707 EGIPALDNFLDKL ddPTM_A459_MK2206_30min_R1 1 EGIPALDNFLDKL 13 1 P13639 P13639 EEF2 Elongation factor 2 0 146.5 0.0083809 29046000 982.64 986.19 1000.1 1388.9 1077.9 1066.1 1210.1 1157 1064.8 963.09 FALSE TRUE 899.061308 921.9888518 932.2159984 1495.873319 1034.964961 1126.461661 1129.376437 1146.884471 1175.48977 1082.40486 0.830614626 0.851796667 0.861245208 1.381990578 0.95617176 1.0407027 1.043395571 1.059570696 1.085998238 1 10.08002451 -5.567969143 24.99999656 1.078714206 0.845032372 0.49540761 0.107960444 98.69824822 54721.96513 0.028376067 0.04914882 2.70E-06 5.567969143 -0.233681834 EGIREETVSLR ddPTM_A459_MK2206_30min_R1 2 EGIREETVSLR 11 1 P20618 P20618 PSMB1 Proteasome subunit beta type-1 0 ; 136.81 0.0039031 26569000 4703.2 4260 4664.4 4327.5 5103.3 5087.6 4989.8 4866 3247.7 2924.2 FALSE TRUE 4303.168143 3982.673226 4347.793524 4660.8048 4900.024755 5375.655515 4656.939546 4823.457075 3585.310037 3286.471973 1.309357931 1.211838488 1.322936438 1.418178776 1.490968064 1.635691879 1.417002666 1.46767023 1.090929747 1 11.68232397 -8.359537318 4.270864604 1.008871888 1.41047336 0.641469728 0.10938603 0.159525775 4.73445152 0.120123178 0.031756292 4.37E-09 8.359537318 0.401601472 EGIREETVSLR ddPTM_A459_MK2206_30min_R2 2 EGIREETVSLR 11 1 P20618 P20618 PSMB1 Proteasome subunit beta type-1 0 ; 126.66 0.0087822 9631000 24523 37105 29410 31442 34425 45240 35290 30797 35883 33641.8 FALSE TRUE 26400.49973 35262.41966 30390.51472 28873.08802 33073.30153 46961.6399 30656.38061 34822.27364 39004.03848 32544.07082 0.81122303 1.083528236 0.933826468 0.887199643 1.01626197 1.443016768 0.941995879 1.070003622 1.198499066 1 14.9901071 -6.530990567 24.99822478 1.135101335 0.94175924 0.312260083 0.140992487 239.9968682 739593.3805 0.045604482 0.045680684 2.94E-07 6.530990567 -0.193342096 EGITGPPADSSKPIGPDDAIDALSSDFT(ph)CGSPTAAGK ddPTM_A459_MK2206_30min_R1 1 EGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK 37 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;H0YA91;B7Z574;E7EVY3;E7ES10;E9PDE4 P20810-6 CAST Calpastatin 1 EGITGPPADSSKPIGPDDAIDALS(0.014)S(0.144)DFT(0.537)CGS(0.283)PT(0.022)AAGK 95.746 5.23E-14 18888000 4602.1 4374.9 4800.2 4174.5 4243.2 4181.6 4397.3 4369.2 4006.8 4115.3 TRUE FALSE 4210.667228 4090.093215 4474.375798 4496.020713 4074.184359 4418.358578 4103.96414 4331.000545 4423.321198 4625.134433 0.910388074 0.884318775 0.967404486 0.972084331 0.880879122 0.955293007 0.887317807 0.936405332 0.956365974 1 12.17527958 -8.540702413 2.061786492 0.99944976 0.924004897 0.355532095 0.032008539 0.390627432 3.820788795 0.030854413 0.008585731 2.88E-09 8.540702413 -0.075444863 EGITGPPADSSKPIGPDDAIDALSSDFTCGS(ph)PTAAGK ddPTM_A459_MK2206_30min_R1 1 EGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK 37 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;H0YA91;B7Z574;E7EVY3;E7ES10;E9PDE4 P20810-6 CAST Calpastatin 1 EGITGPPADSSKPIGPDDAIDALS(0.002)S(0.002)DFT(0.147)CGS(0.796)PT(0.052)AAGK 111.18 5.19E-19 16716000 3779.5 3652.1 3511.1 3427.3 3287.1 2853.2 3191.6 3724.7 3049.9 3014 TRUE FALSE 3458.033678 3414.347626 3272.776314 3691.27124 3156.167846 3014.745718 2978.694187 3692.135341 3366.948019 3387.397075 1.020852767 1.007956124 0.966162585 1.089707276 0.931738375 0.889988877 0.879346035 1.089962369 0.993963195 1 11.7259614 EGITGPPADSSKPIGPDDAIDALSSDFTCGS(ph)PTAAGK ddPTM_A459_MK2206_30min_R2 1 EGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK 37 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;H0YA91;B7Z574;E7EVY3;E7ES10;E9PDE4 P20810-6 CAST Calpastatin 1 EGITGPPADSSKPIGPDDAIDALS(0.036)S(0.083)DFT(0.142)CGS(0.701)PT(0.038)AAGK 83.921 4.34E-08 8886100 52369 58167 56381 56265 51464 40561 59600 48530 45415 58703 TRUE FALSE 56378.4109 55278.51136 58260.7144 51667.96952 49443.26477 42104.57728 51774.44841 54873.03763 49365.11461 56787.52592 0.992795689 0.973427007 1.025942114 0.909847166 0.870671225 0.7414406 0.911722206 0.966286816 0.86929504 1 15.79328644 -5.883702718 5.145145123 0.885378348 0.994389664 0.332628747 0.065660835 0.240056293 9.820583874 0.019459633 0.029452466 1.31E-06 5.883702718 0.109011317 EGKPEIEGKPES(ph)EGEPGSETR ddPTM_A459_MK2206_30min_R1 2 EGKPEIEGKPESEGEPGSETR 21 2 D6RD44;Q96EI5;Q96EI5-2 D6RD44 TCEAL4 Transcription elongation factor A protein-like 4 1 EGKPEIEGKPES(0.842)EGEPGS(0.079)ET(0.079)R;EGKPEIEGKPES(0.602)EGEPGS(0.199)ET(0.199)R 75.106 0.0034964 28433000 1780.71 2235.81 1904.69 1872.08 1728.74 1507.58 1793.14 1506.01 1481.89 1482.13 TRUE FALSE 1629.251264 2090.258363 1775.40495 2016.267926 1659.880625 1592.937877 1673.522902 1492.843113 1635.937768 1665.747454 0.978090202 1.2548471 1.065830805 1.21042834 0.99647796 0.956290147 1.004667844 0.896200147 0.982104319 1 10.70195397 -6.406854081 5.66872175 0.964972661 1.131363651 0.502343347 0.075710735 0.174484611 7.496583352 0.022041685 0.024960042 3.92E-07 6.406854081 0.16639099 EGKPEIEGKPES(ph)EGEPGSETR ddPTM_A459_MK2206_30min_R2 2 EGKPEIEGKPESEGEPGSETR 21 2 D6RD44;Q96EI5;Q96EI5-2 D6RD44 TCEAL4 Transcription elongation factor A protein-like 4 1 EGKPEIEGKPES(0.984)EGEPGS(0.012)ET(0.005)R;EGKPEIEGKPES(0.861)EGEPGS(0.13)ET(0.008)R 77.445 0.0029461 28691700 42862.1 41144.7 41163.2 40471.4 37012.1 26050.5 43991 32912.6 27805.5 43964.3 TRUE FALSE 46143.65533 39101.51403 42535.56054 37164.75716 35558.81898 27041.87003 38214.92886 37214.38983 30223.97213 42529.74849 1.084973624 0.919392082 1.000136659 0.873853208 0.836092858 0.635834233 0.898545846 0.875020219 0.710654852 1 15.3761847 -5.897871955 2.381401704 0.814368913 0.998179045 0.371525144 0.101185008 0.306647294 3.531182469 0.030234797 0.050131617 1.27E-06 5.897871955 0.183810132 EGKPEIEGKPESEGEPGS(ph)ETR ddPTM_A459_MK2206_30min_R1 1 EGKPEIEGKPESEGEPGSETR 21 2 D6RD44;Q96EI5;Q96EI5-2 D6RD44 TCEAL4 Transcription elongation factor A protein-like 4 1 EGKPEIEGKPES(0.113)EGEPGS(0.444)ET(0.444)R 54.465 0.039464 15146000 704.68 1004 823.05 787.15 772.79 532.05 651.43 568.7 665.68 799.87 TRUE FALSE 644.7432656 938.6394175 767.1836591 847.7764294 742.0081379 562.1742112 607.9742933 563.7279159 734.8798182 898.9639343 0.717207044 1.044134677 0.853408718 0.943059445 0.825403678 0.625357915 0.676305545 0.627086243 0.817474195 1 9.812119427 -6.544452696 7.440244581 0.721373173 0.896429225 0.194203726 0.128447039 0.211332888 50.55915059 0.039792176 0.04038074 2.85E-07 6.544452696 0.175056052 EGLEEGDQILR ddPTM_A459_MK2206_30min_R2 1 EGLEEGDQILR 11 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 0 145.99 0.0095863 2277500 11682 13346 11626 15444 13256 17404 12846 10699 14743 11424 FALSE TRUE 12576.3829 12683.25705 12013.60504 14182.1758 12735.50283 18066.32142 11159.30477 12097.39604 16025.31949 11051.23582 1.138006926 1.147677713 1.087082498 1.2833113 1.15240531 1.634778383 1.009778902 1.094664546 1.450092981 1 13.43192009 -5.760364517 24.99979946 1.240280061 1.126597905 0.065231705 0.185318436 83.27221148 1936688.922 0.050506051 0.081514616 1.74E-06 5.760364517 -0.113682156 EGLELPEDEEEK ddPTM_A459_MK2206_30min_R1 4 EGLELPEDEEEK 12 0 P07900;P07900-2;Q58FG0;P08238;Q58FF7;Q58FF6 P07900;P08238;Q58FF6 HSP90AA1;HSP90AA5P;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 0 ;;; 181.68 0.0014357 26532300 11960.4 12831.2 11718.3 9836.3 8933 9245.5 11698.7 8515.2 14108.6 17303.9 FALSE TRUE 10943.10517 11995.88655 10922.89445 10593.89353 8577.179694 9768.97222 10918.30107 8440.752504 15575.23946 19447.63777 0.562695856 0.616830007 0.561656617 0.544739349 0.441039667 0.50232179 0.561420425 0.434024564 0.800880788 1 14.24730731 -8.481083402 3.833768095 0.998190155 0.531108437 0.888615044 0.054873412 0.060630558 2.005298367 0.056272447 0.014793003 3.30E-09 8.481083402 -0.467081718 EGLELPEDEEEK ddPTM_A459_MK2206_30min_R2 4 EGLELPEDEEEK 12 0 P07900;P07900-2;Q58FG0;P08238;Q58FF7;Q58FF6 P07900;P08238;Q58FF6 HSP90AA1;HSP90AA5P;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 0 ;;; 193.96 4.37E-08 30517000 251339 166852 189072 160798 152521 128063 214211 172554 117654 218117 FALSE TRUE 270581.7071 158566.3723 195375.5661 147660.289 146532.2592 132936.5272 186084.8384 195107.4003 127887.3323 210999.8602 1.282378609 0.751499893 0.925951164 0.69981226 0.694466144 0.630031352 0.88191925 0.924680235 0.606101502 1 17.68688252 -4.75913819 24.96028792 0.784382658 1.282379268 0.564612683 0.129482127 43.76048596 474547.0475 0.031566906 0.205173577 1.74E-05 4.75913819 0.497996611 EGLELPEDEEEKK ddPTM_A459_MK2206_30min_R2 1 EGLELPEDEEEKK 13 1 P07900;P07900-2;Q58FG0;P08238;Q58FF7;Q58FF6 P07900;P08238;Q58FF6 HSP90AA1;HSP90AA5P;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 0 81.709 0.046694 11116000 45399 34313 43312 28223 33564 18642 37719 29105 25251 42086 FALSE TRUE 48874.78235 32609.06632 44756.00046 25917.09062 32246.10871 19351.43437 32766.44999 32909.12343 27447.28634 40712.73727 1.200478907 0.800954898 1.099311996 0.636584331 0.792039811 0.475316465 0.804820609 0.808325002 0.674169515 1 15.3131926 -5.761232655 24.99998121 0.727261203 1.010319252 0.409625244 0.159248435 5.299599108 640716.3282 0.041807817 0.066953106 1.73E-06 5.761232655 0.283058049 EGLISQDGS(ph)SLEALLR ddPTM_A459_MK2206_30min_R1 1 EGLISQDGSSLEALLR 16 0 J3KMZ8;Q92785-2;Q92785 J3KMZ8 DPF2 Zinc finger protein ubi-d4 1 EGLIS(0.001)QDGS(0.871)S(0.129)LEALLR 144.25 0.00062573 0 541.3 522.47 339.01 393.44 651.43 559.58 610.44 439.77 433.14 357.2 TRUE FALSE 495.2595925 488.457108 315.9989457 423.742817 625.4821637 591.262936 569.7186614 435.9251373 478.166453 401.4526327 1.233668812 1.216724137 0.787138805 1.055523821 1.558047233 1.472808715 1.41914292 1.08586942 1.19109059 1 8.649085964 -4.987692034 23.19579756 1.210137351 1.229432762 0 0.222830635 2963.286159 5584212.655 0.061307078 0.236364913 1.03E-05 4.987692034 0.019295411 EGLITADAEGDFIDAR ddPTM_A459_MK2206_30min_R1 1 EGLITADAEGDFIDAR 16 0 C9J020;Q86UG4-3;Q86UG4-2;Q86UG4 C9J020 SLCO6A1 Solute carrier organic anion transporter family member 6A1 0 123.62 0.018729 20497000 3000.5 2693.6 2570 2316.1 3289.2 2754.7 2807.7 2679.8 2399 2132.1 FALSE TRUE 2745.291719 2518.24615 2395.55556 2494.486423 3158.184199 2910.668733 2620.403456 2656.370791 2648.384635 2396.240645 1.145666119 1.050915381 0.9997141 1.040999963 1.317974556 1.214681313 1.093547704 1.108557606 1.10522482 1 11.22655708 -4.457038816 19.74055174 1.110791242 1.841088701 0.012719845 0.09333818 159.2695711 252450.0773 0.024427259 31649.49347 3.49E-05 4.457038816 0.730297459 EGLLLWCQR ddPTM_A459_MK2206_30min_R1 2 EGLLLWCQR 9 0 O43707;P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;G3V2N5;Q08043;G3V2W4;A0A087WSZ2;A0A494C033;A0A494C166;G3V2X9 O43707;P12814-4 ACTN4;ACTN1;ACTN2;ACTN3 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3 0 ; 150.05 0.018846 41211000 5127.6 5556.9 4945.4 4534.6 5544.4 4672.9 4485.9 4583.9 4268.8 3754 FALSE TRUE 4691.470694 5195.1448 4609.720027 4883.855678 5323.554808 4937.47556 4186.653796 4543.823446 4712.557036 4219.073861 1.11196695 1.231347203 1.092590502 1.157565816 1.261782795 1.170274739 0.992315834 1.07697177 1.116964811 1 12.04271063 -7.238559885 22.43439879 1.052977443 1.173630522 0.528719251 0.057356612 177.8996148 174438.6519 0.022046876 0.017060746 5.77E-08 7.238559885 0.120653079 EGLRPGDTTST(ph)FCGTPNYIAPEILR ddPTM_A459_MK2206_30min_R1 1 EGLRPGDTTSTFCGTPNYIAPEILR 25 1 P41743 P41743 PRKCI Protein kinase C iota type 1 EGLRPGDT(0.033)T(0.146)S(0.146)T(0.522)FCGT(0.146)PNY(0.009)IAPEILR 62.781 0.0055636 13835000 1585.5 1140.8 1175.4 1270 1333.6 909.92 1278.6 1272.2 1066.4 1113 TRUE FALSE 1450.644899 1066.533713 1095.617123 1367.81562 1280.479888 961.4388841 1193.306927 1261.07729 1177.256096 1250.886843 1.159693147 0.852622057 0.87587229 1.093476703 1.023657652 0.768605801 0.953968725 1.008146578 0.941137164 1 10.28873557 -3.918279211 14.39600388 0.961330282 0.966863995 0 0.110048872 0 0 0.024989518 0 0.000120704 3.918279211 0.005533713 EGLYLSDT(ph)LPR ddPTM_A459_MK2206_30min_R2 2 EGLYLSDTLPR 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PRT1 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 EGLYLS(0.218)DT(0.782)LPR;EGLYLS(0.022)DT(0.978)LPR 108.72 0.022944 4117700 21216 31250 25008 26430 23274.7 25746 18559.6 16297.9 17060.5 15268.1 TRUE FALSE 22840.31327 29698.17044 25841.75424 24270.58445 22360.81833 26725.78207 16122.70223 18428.09149 18544.39145 14769.90315 1.546409143 2.010722084 1.749622457 1.643246013 1.513944818 1.809475784 1.091591601 1.24767856 1.255552678 1 13.85037275 -7.262892624 0.835883661 1.080142631 1.774202795 0.689798091 0.174379666 0.355097449 0.484024362 0.137467868 0.081796834 5.46E-08 7.262892624 0.694060164 EGMGS(ph)PAYEQDLIVASRPK ddPTM_A459_MK2206_30min_R2 2 EGMGSPAYEQDLIVASRPK 19 1 Q96M11 Q96M11 HYLS1 Hydrolethalus syndrome protein 1 1 EGMGS(0.982)PAY(0.018)EQDLIVASRPK;EGMGS(0.931)PAY(0.068)EQDLIVASRPK 67.252 0.011594 5978700 23283.1 27405 29317 26097 29084 26533 29082 23261.5 26322 28329 TRUE FALSE 25065.67204 26044.10755 30294.41415 23964.79162 27942.01602 27542.73191 25263.49847 26301.85792 28611.43998 27404.62705 0.914651091 0.950354387 1.105448875 0.874479758 1.019609425 1.005039472 0.921869815 0.959759747 1.044036831 1 14.74213188 -5.005819947 24.57182742 0.987576439 0.923576849 0.140588984 0.060439026 421.8332455 1781060.852 0.014585092 0.050034207 9.87E-06 5.005819947 -0.06399959 EGMNIVEAMER ddPTM_A459_MK2206_30min_R1 2 EGMNIVEAMER 11 0 P62937;P62937-2 P62937 PPIA "Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed" 0 ; 192.44 0.0029782 44618000 3026.6 3170.2 3159.4 2982.5 3823.3 3166.9 3772.5 3274.5 3150.6 3320.1 FALSE TRUE 2769.171777 2963.819404 2944.948731 3212.212667 3671.009865 3346.207141 3520.843408 3245.871392 3478.116145 3731.419053 0.742122966 0.794287471 0.789230233 0.860855514 0.983810666 0.896765304 0.943566873 0.869875869 0.932116199 1 11.86550867 -5.903805595 2.844992855 0.929531396 0.774365906 0.781712322 0.038318131 0.120232897 1.964289611 0.011059159 0.017654741 1.25E-06 5.903805595 -0.15516549 EGMNIVEAMER ddPTM_A459_MK2206_30min_R2 1 EGMNIVEAMER 11 0 P62937;P62937-2 P62937 PPIA "Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed" 0 166.29 0.0083573 9003800 39382 32927 34169 42288 37681 36000 45495 37707 37603 38929 FALSE TRUE 42397.1162 31291.89306 35308.17741 38832.93513 36201.45461 37370.00523 39521.45185 42635.43437 40873.64097 37658.74992 1.12582378 0.830932868 0.937582301 1.031179612 0.961302611 0.9923326 1.04946266 1.132152142 1.085369033 1 15.20069749 -7.290885734 2.791491478 1.082597022 0.97067067 0.235064178 0.076197583 0.347944587 5.404853508 0.034437831 0.022749186 5.12E-08 7.290885734 -0.111926353 EGMNPSYDEYADS(ph)DEDQHDAYLER ddPTM_A459_MK2206_30min_R1 18 EGMNPSYDEYADSDEDQHDAYLER 24 0 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 1 EGMNPSYDEY(0.002)ADS(0.998)DEDQHDAYLER;EGMNPS(0.002)Y(0.007)DEY(0.174)ADS(0.817)DEDQHDAYLER;EGMNPSYDEY(0.001)ADS(0.999)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEY(0.008)ADS(0.992)DEDQHDAYLER;EGMNPS(0.017)Y(0.015)DEY(0.263)ADS(0.705)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEY(0.001)ADS(0.999)DEDQHDAYLER;EGMNPS(0.015)Y(0.009)DEY(0.015)ADS(0.961)DEDQHDAYLER;EGMNPSYDEY(0.002)ADS(0.998)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPS(0.001)Y(0.007)DEY(0.044)ADS(0.948)DEDQHDAYLER;EGMNPSY(0.001)DEY(0.003)ADS(0.996)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPS(0.001)Y(0.002)DEY(0.059)ADS(0.939)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(0.999)DEDQHDAYLER 157.08 9.49E-13 1036134900 39462.7 40358.37 40571.95 34073.28 42008.42 38145.23 41907.32 35294.7 33030.5 32472.28 TRUE FALSE 36106.19014 37731.03278 37818.03907 36697.60993 40335.13568 40304.97996 39111.75915 34986.12216 36464.13868 36495.1912 0.989341032 1.033863135 1.036247183 1.005546449 1.105217821 1.104391528 1.071696239 0.958650195 0.999149134 1 15.15541876 -7.758958644 24.99913896 0.984174744 1.050929859 0.381212894 0.037043822 71.84126067 723989.0111 0.020237723 0.010977926 1.74E-08 7.758958644 0.066755115 EGMNPSYDEYADS(ph)DEDQHDAYLER ddPTM_A459_MK2206_30min_R2 19 EGMNPSYDEYADSDEDQHDAYLER 24 0 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 1 EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPS(0.001)YDEY(0.003)ADS(0.996)DEDQHDAYLER;EGMNPSYDEY(0.003)ADS(0.997)DEDQHDAYLER;EGMNPSYDEY(0.008)ADS(0.992)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEY(0.002)ADS(0.997)DEDQHDAYLER;EGMNPSY(0.002)DEYADS(0.997)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSY(0.002)DEY(0.012)ADS(0.985)DEDQHDAYLER;EGMNPSYDEY(0.004)ADS(0.994)DEDQHDAY(0.002)LER;EGMNPSYDEY(0.002)ADS(0.998)DEDQHDAYLER;EGMNPS(0.002)Y(0.015)DEY(0.31)ADS(0.673)DEDQHDAYLER;EGMNPSYDEY(0.005)ADS(0.995)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPS(0.001)Y(0.003)DEY(0.093)ADS(0.903)DEDQHDAYLER;EGMNPSY(0.001)DEY(0.007)ADS(0.992)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSY(0.002)DEY(0.02)ADS(0.977)DEDQHDAYLER 137.36 4.60E-08 2928057000 955647 1183117.5 1095445.8 1306636.6 1301411.4 1247103.8 1261504.9 1005336.4 1033560.1 1142297.2 TRUE FALSE 1028812.069 1124365.605 1131967.416 1199880.21 1250311.449 1294563.209 1095867.791 1136737.319 1123457.289 1105024.136 0.93103131 1.01750321 1.024382527 1.085840726 1.13147886 1.171524826 0.991713896 1.028699087 1.016681222 1 20.07564645 -4.748546034 1.434255433 1.064560192 0.872384453 0.322377828 0.055217774 1.641643731 2.918018999 0.017401269 0.467115599 1.78E-05 4.748546034 -0.192175739 EGNTTEDDFPSS(ph)PGNGNK ddPTM_A459_MK2206_30min_R1 5 EGNTTEDDFPSSPGNGNK 18 0 Q15007 Q15007 WTAP Pre-mRNA-splicing regulator WTAP 1 EGNTTEDDFPS(0.029)S(0.971)PGNGNK;EGNTTEDDFPSS(1)PGNGNK;EGNTTEDDFPS(0.078)S(0.922)PGNGNK;EGNTTEDDFPS(0.004)S(0.996)PGNGNK;EGNTTEDDFPS(0.008)S(0.992)PGNGNK 267.39 7.68E-54 113697400 23995.9 25476.3 25228.2 20859.4 21368.3 19819.6 22893.8 23359.4 20475.7 19631 TRUE FALSE 21954.9227 23817.78824 23515.78007 22465.9946 20517.15536 20941.76862 21366.59637 23155.17123 22604.22229 22063.03649 0.995099777 1.079533556 1.065845134 1.018263946 0.929933438 0.949178896 0.968434077 1.049500654 1.024529072 1 14.42934374 -6.002141367 14.6237501 0.985456039 1.048760991 0.331627109 0.038271169 0.512982284 3492.677837 0.011990772 0.0171463 9.95E-07 6.002141367 0.063304952 EGNTTEDDFPSS(ph)PGNGNK ddPTM_A459_MK2206_30min_R2 4 EGNTTEDDFPSSPGNGNK 18 0 Q15007 Q15007 WTAP Pre-mRNA-splicing regulator WTAP 1 EGNTTEDDFPS(0.012)S(0.988)PGNGNK;EGNTTEDDFPS(0.183)S(0.817)PGNGNK;EGNTTEDDFPS(0.033)S(0.967)PGNGNK;EGNTTEDDFPS(0.09)S(0.91)PGNGNK 221.81 1.60E-14 172236400 404097 445189 435416 438502 454125 313645 490199 385674 340251 465736 TRUE FALSE 435034.977 423081.5616 449932.5521 402674.9839 436293.7707 325580.9803 425835.2825 436082.916 369845.4169 450539.0725 0.965587678 0.939056316 0.99865379 0.893762625 0.968381651 0.722647602 0.945168374 0.967913645 0.820895322 1 18.7812927 -5.777878862 24.84306143 0.898350774 0.964894965 0.125376041 0.07808172 444.5943133 671862.0846 0.0216883 0.032274777 1.67E-06 5.777878862 0.066544191 EGPDLDRPGS(ph)DR ddPTM_A459_MK2206_30min_R2 1 EGPDLDRPGSDR 12 1 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;A0A087WZ99 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 EGPDLDRPGS(1)DR 62.799 0.047734 26470000 152290 141020 135660 155720 129600 140570 154120 147950 98218 167670 TRUE FALSE 163949.4395 134017.1519 140182.8367 142997.1779 124511.2528 145919.4899 133883.8589 167287.573 106760.8241 162198.9416 1.010792289 0.826251704 0.864264805 0.881615974 0.767645285 0.899632811 0.825429917 1.031372778 0.658209129 1 17.30740488 -4.879669529 0.003645541 1.730118888 8.51E-07 0.005901918 0.110405103 550550.1368 323.757011 74868.68322 78815.62545 1.32E-05 4.879669529 -1.730118036 EGPEPPEEVPPPT(ph)TPPVPK ddPTM_A459_MK2206_30min_R1 2 EGPEPPEEVPPPTTPPVPK 19 0 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 EGPEPPEEVPPPT(0.931)T(0.069)PPVPK;EGPEPPEEVPPPT(0.931)T(0.069)PPVPK 169.02 1.09E-08 24658000 10500.9 10983.6 10544.2 9275.3 8962.7 9028.4 9645.6 8412.1 8730.1 8267 TRUE FALSE 9607.743313 10268.56564 9828.489082 9989.685213 8605.69668 9539.580206 9002.159623 8338.553897 9637.625136 9291.178373 1.03407156 1.10519519 1.057830201 1.075179575 0.926222308 1.026735235 0.968893208 0.897470005 1.03728771 1 13.18164587 -6.245201999 24.66264511 0.973146193 1.069989651 0.524280554 0.04284647 517.8970177 786623.2527 0.012192573 0.01568952 5.69E-07 6.245201999 0.096843459 EGPEPPEEVPPPT(ph)TPPVPK ddPTM_A459_MK2206_30min_R2 4 EGPEPPEEVPPPTTPPVPK 19 0 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 EGPEPPEEVPPPT(0.974)T(0.026)PPVPK;EGPEPPEEVPPPT(0.927)T(0.073)PPVPK;EGPEPPEEVPPPT(0.998)T(0.002)PPVPK;EGPEPPEEVPPPT(0.952)T(0.048)PPVPK 127.29 0.0008221 55412000 288748 336288 322913 337733 319410 266155 346931 260748 259649 321055 TRUE FALSE 310854.7689 319588.4269 333678.7583 310139.1335 306868.3585 276283.715 301378.543 294828.6589 282232.8007 310579.0016 1.000887913 1.029008482 1.074376428 0.998583716 0.988052498 0.889576287 0.97037643 0.949287161 0.908731109 1 18.24460077 -6.32649771 2.447427848 0.942476224 1.032514432 0.548098909 0.03482607 0.208953 2.457062695 0.01134747 0.013783725 4.72E-07 6.32649771 0.090038208 EGPGEEHFEDMAS(ph)DEDMKPK ddPTM_A459_MK2206_30min_R2 2 EGPGEEHFEDMASDEDMKPK 20 1 Q99856 Q99856 ARID3A AT-rich interactive domain-containing protein 3A 1 EGPGEEHFEDMAS(1)DEDMKPK;EGPGEEHFEDMAS(1)DEDMKPK 112.36 0.00018099 11121100 23367.1 21564.3 24380 19892.1 19214.4 13271.4 26738.6 19626.4 17904.4 23140.5 TRUE FALSE 25156.10314 20493.44822 25192.81703 18266.8518 18459.94611 13776.45243 23227.7897 22191.63787 19461.69235 22385.42738 1.123771403 0.91548166 1.125411483 0.816015325 0.824641219 0.615420568 1.037629941 0.991343051 0.869391145 1 14.45027224 -5.767320472 24.99997364 0.872181599 1.040947536 0.286639391 0.126093057 192.9834843 820358.4468 0.036770058 0.056197917 1.71E-06 5.767320472 0.168765936 EGPLGWSSDGSLGSVLLDSPS(ph)SPR ddPTM_A459_MK2206_30min_R1 2 EGPLGWSSDGSLGSVLLDSPSSPR 24 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 EGPLGWSSDGSLGSVLLDS(0.02)PS(0.734)S(0.246)PR;EGPLGWSSDGSLGSVLLDS(0.116)PS(0.442)S(0.442)PR 186.42 2.58E-26 11017000 2400.1 2145.4 2093.68 1795.03 1886.16 1641.69 1431.92 1298.25 1207.47 1195.2 TRUE FALSE 2195.958892 2005.73407 1951.566835 1933.283522 1811.030253 1734.641069 1336.399229 1286.899537 1332.990827 1343.270399 1.634785441 1.493172239 1.452847346 1.439236302 1.348224642 1.29135658 0.994884746 0.958034613 0.992347355 1 10.39153403 -6.918484294 1.006116116 0.950748556 1.523215649 0.94349827 0.056930277 0.116303158 0.247131356 0.036387826 0.028303108 1.21E-07 6.918484294 0.572467093 EGPPAPPPVKPPPS(ph)PVNIR ddPTM_A459_MK2206_30min_R1 4 EGPPAPPPVKPPPSPVNIR 19 1 Q8TF74-2;Q8TF74 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 EGPPAPPPVKPPPS(1)PVNIR;EGPPAPPPVKPPPS(1)PVNIR;EGPPAPPPVKPPPS(1)PVNIR;EGPPAPPPVKPPPS(1)PVNIR 123.64 0.00022622 295506700 21245.1 22480.6 19974.3 17694.4 20973.8 19739 18749.4 19398.3 15920.7 16170 TRUE FALSE 19438.09268 21017.10885 18618.50017 19057.22575 20138.36913 20856.60512 17498.66174 19228.70271 17575.71374 18173.26168 1.069598459 1.156485238 1.024499647 1.048640915 1.108131798 1.147653376 0.962879534 1.058076588 0.967119389 1 14.14952975 -7.26842165 24.93376669 1.001858594 1.091035723 0.516835891 0.045117071 487.2465142 1739954.007 0.018826681 0.012977689 5.39E-08 7.26842165 0.089177129 EGPPAPPPVKPPPS(ph)PVNIR ddPTM_A459_MK2206_30min_R2 5 EGPPAPPPVKPPPSPVNIR 19 1 Q8TF74-2;Q8TF74 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 EGPPAPPPVKPPPS(1)PVNIR;EGPPAPPPVKPPPS(1)PVNIR;EGPPAPPPVKPPPS(1)PVNIR;EGPPAPPPVKPPPS(1)PVNIR;EGPPAPPPVKPPPS(1)PVNIR 119.18 0.00024514 107948300 342538 418728 381798 433958 405963 398210 398286 344988 414227 426413 TRUE FALSE 368762.9726 397934.5764 394526.9548 398502.2432 390022.8528 413364.1606 345990.5698 390079.1161 450255.7157 412499.1787 0.893972623 0.964691803 0.956430885 0.966067968 0.945511829 1.00209693 0.838766688 0.945648225 1.091531181 1 18.65403172 -8.238623412 20.10627754 1.045765316 0.940437437 0.451928249 0.046947506 50.95959671 44908.70838 0.031218162 0.011750711 5.77E-09 8.238623412 -0.105327879 EGPSCPS(ph)PGPFCR ddPTM_A459_MK2206_30min_R1 1 EGPSCPSPGPFCR 13 0 Q4AC94 Q4AC94 C2CD3 C2 domain-containing protein 3 1 EGPS(0.313)CPS(0.687)PGPFCR 97.957 0.012947 16055000 3041.3 1503.6 1549.1 1169.1 4640.7 4159.2 3860.2 2955.5 1363.6 1348.9 TRUE FALSE 2782.621464 1405.715367 1443.951408 1259.144285 4455.851092 4394.69031 3602.693101 2929.660375 1505.3511 1516.011916 1.835487858 0.927245592 0.952467057 0.83056358 2.939192658 2.898849451 2.376427958 1.932478462 0.992967855 1 10.56606538 -3.265675946 19.26335674 1.719840675 1.726730666 0 0.80130984 0 0 0.203078092 0 0.000542405 3.265675946 0.006889991 EGPSCPS(ph)PGPFCR ddPTM_A459_MK2206_30min_R2 2 EGPSCPSPGPFCR 13 0 Q4AC94 Q4AC94 C2CD3 C2 domain-containing protein 3 1 EGPS(0.04)CPS(0.96)PGPFCR;EGPS(0.357)CPS(0.643)PGPFCR 149.82 0.00050901 65055000 58277 77853 67706 65784 76045 77961 65227 53408 71046 74470 TRUE FALSE 62738.73193 73986.93323 69963.28425 60409.23677 73059.0912 80927.86048 56662.61655 60388.60898 77225.45266 72040.05 0.870886846 1.027025012 0.971172067 0.838550733 1.014145482 1.123373186 0.786543271 0.838264396 1.071979443 1 16.13651156 -4.715034469 22.79839087 0.955787791 0.870883319 0.06211323 0.104142743 14287.96521 7017960.206 0.026467931 13.61777658 1.93E-05 4.715034469 -0.084904472 EGPSGSGDSQLS(ph)ASSR ddPTM_A459_MK2206_30min_R2 1 EGPSGSGDSQLSASSR 16 0 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 EGPSGSGDSQLS(0.999)AS(0.001)SR 123.92 0.0011265 0 9732.7 7077.4 7404.9 9197.3 8962.9 5946.1 11501 12104 10727 11761 TRUE FALSE 10477.843 6725.946608 7651.77567 8445.851169 8610.971511 6172.383002 9990.904885 13686.03436 11660.01507 11377.23953 0.920947736 0.591175618 0.672551162 0.742346256 0.756859472 0.542520265 0.878148417 1.20293102 1.024854494 1 13.47386294 -7.536801491 5.614094472 1.081032248 0.701833468 0.705261141 0.107753477 0.084375033 8.874838652 0.048237695 0.028514223 2.91E-08 7.536801491 -0.37919878 EGPTDHLESACPLNLPLQNNHTAADMYLS(ph)PVR ddPTM_A459_MK2206_30min_R2 2 EGPTDHLESACPLNLPLQNNHTAADMYLSPVR 32 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 EGPTDHLESACPLNLPLQNNHT(0.008)AADMY(0.001)LS(0.991)PVR;EGPTDHLESACPLNLPLQNNHT(0.32)AADMY(0.025)LS(0.655)PVR 78.212 6.40E-06 5774300 49173 56171 49475 54509 50737 51395 58312 46606 47937 50714 TRUE FALSE 52937.72269 53381.62982 51124.47181 50055.44033 48744.81045 53350.87274 50655.56435 52697.56422 52106.47361 49059.20633 1.07905787 1.088106266 1.042097409 1.02030677 0.993591501 1.087479328 1.032539418 1.074162592 1.062114076 1 15.58223627 -7.878402834 0.004924964 1.69E-08 2.085836797 0.168324098 0.030683783 9547.66216 47.84251662 10121.99739 10136.44717 1.32E-08 7.878402834 2.08583678 EGPVAS(ph)PPFMDLEQAVLPAVIPK ddPTM_A459_MK2206_30min_R2 2 EGPVASPPFMDLEQAVLPAVIPK 23 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 EGPVAS(1)PPFMDLEQAVLPAVIPK;EGPVAS(1)PPFMDLEQAVLPAVIPK 143.36 7.28E-07 19015600 120821 152097 132907 150490 135357 120094 144983 116220 116190 134913 TRUE FALSE 130071.1487 144544.0841 137338.053 138194.4856 130042.2041 124664.2613 125946.5579 131410.353 126295.9962 130510.7999 0.996631304 1.107525847 1.052311787 1.058873946 0.996409525 0.955202646 0.96502786 1.006892557 0.967705326 1 16.99380967 -6.337070164 3.754272206 0.978341689 1.057996537 0.598535325 0.029017146 0.152300402 4.148457218 0.008958332 0.010435875 4.60E-07 6.337070164 0.079654847 EGPVLAT(ph)SSGAGVFK ddPTM_A459_MK2206_30min_R1 1 EGPVLATSSGAGVFK 15 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 EGPVLAT(0.515)S(0.335)S(0.15)GAGVFK 99.069 0.019816 4329900 1147.6 1230.4 1227.2 990.74 1259.6 951.39 1419.2 1323.1 915.93 1222.8 TRUE FALSE 1049.990594 1150.300736 1143.901083 1067.046966 1209.427465 1005.25688 1324.527757 1311.532276 1011.144201 1374.289696 0.764024206 0.837014743 0.832358044 0.776435252 0.880038225 0.731473781 0.963790794 0.95433465 0.735757682 1 10.42447044 -7.269506449 24.98324494 0.909665334 0.808630864 0.328717495 0.076665707 795.1615999 2462557.568 0.030451242 0.020940552 5.38E-08 7.269506449 -0.10103447 EGPVLAT(ph)SSGAGVFK ddPTM_A459_MK2206_30min_R2 1 EGPVLATSSGAGVFK 15 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 EGPVLAT(0.642)S(0.253)S(0.106)GAGVFK 174.47 5.92E-05 7854400 46950 41474 51691 49750 52356 41183 52196 37551 44437 54769 TRUE FALSE 50544.5281 39414.46147 53414.35214 45685.26586 50300.24037 42750.24792 45342.6025 42459.04463 48302.04994 52981.89202 0.953996284 0.743923253 1.008162414 0.862280755 0.949385506 0.806884131 0.855813199 0.801387852 0.911670914 1 15.69321174 -6.758151151 24.9985786 0.86152934 0.898200603 0.013095767 0.08440407 322.9915254 2455523.757 0.026911126 0.025856408 1.75E-07 6.758151151 0.036671263 EGPVLATS(ph)SGAGVFK ddPTM_A459_MK2206_30min_R2 1 EGPVLATSSGAGVFK 15 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 EGPVLAT(0.182)S(0.508)S(0.31)GAGVFK 172.57 3.82E-05 8840000 50427 44946 59605 59319 55488 43592 55249 36969 45318 67174 TRUE FALSE 54287.72989 42714.047 61592.20095 54472.44795 53309.26232 45250.92411 47994.73993 41800.97523 49259.67772 64982.11788 0.835425678 0.65732002 0.94783308 0.838268276 0.820368188 0.696359638 0.738583806 0.643268896 0.758049742 1 15.98775514 -6.736177828 23.77269064 0.743164943 0.818948241 0.031879318 0.110344244 315.8629199 297244.7637 0.035122994 0.035105433 1.84E-07 6.736177828 0.075783298 EGPYS(ph)ISVLYGDEEVPR ddPTM_A459_MK2206_30min_R1 1 EGPYSISVLYGDEEVPR 17 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 EGPYS(0.961)IS(0.039)VLYGDEEVPR 173.28 4.24E-07 2775500 439.4 501.28 502.32 377.16 400.74 488.52 345.72 381.56 556.31 389.8 TRUE FALSE 402.0267226 468.6465809 468.2239179 406.2089286 384.7776772 516.1795802 322.6576496 378.2240611 614.1404153 438.0913668 0.917677802 1.069746214 1.068781431 0.927224226 0.878304633 1.17824641 0.736507665 0.86334516 1.40185464 1 8.775087975 -8.24525099 24.97211499 1.200927373 0.959277039 0.304208977 0.148670571 844.7413939 1303098.556 0.098702501 0.037041167 5.69E-09 8.24525099 -0.241650334 EGPYSISVLYGDEEVPR ddPTM_A459_MK2206_30min_R1 2 EGPYSISVLYGDEEVPR 17 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 ; 232.13 2.03E-15 22294000 3170 4214.1 3706.7 3520.1 2507.9 2323.4 2493.1 2689.9 3100.1 3090.4 FALSE TRUE 2900.374854 3939.761324 3455.099531 3791.218712 2408.005032 2454.9489 2326.789848 2666.382488 3422.366489 3473.262083 0.835057875 1.134311558 0.994770751 1.091544093 0.693297821 0.706813607 0.66991485 0.767688249 0.985346457 1 11.76207556 -6.258977953 24.97406477 0.780679981 1.021152514 0.378056757 0.129848526 204.6448022 2076361.009 0.038598327 0.047528051 5.51E-07 6.258977953 0.240472533 EGPYSISVLYGDEEVPRS(ph)PFK ddPTM_A459_MK2206_30min_R1 3 EGPYSISVLYGDEEVPRSPFK 21 1 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 EGPYSIS(0.001)VLYGDEEVPRS(0.999)PFK;EGPYSISVLYGDEEVPRS(1)PFK;EGPYSISVLYGDEEVPRS(1)PFK 104.97 8.26E-05 47660300 6264.7 5075.34 4783.9 4314.49 6207.4 5519.6 5320.9 4575.3 3521.71 3583.72 TRUE FALSE 5731.854368 4744.934444 4459.182197 4646.792767 5960.146114 5832.114982 4965.95247 4535.298634 3887.804357 4027.698289 1.42310917 1.178075939 1.107129153 1.153709249 1.479789618 1.448001951 1.232950463 1.1260274 0.965267028 1 11.9757399 -7.93446114 2.425821171 0.986511581 1.287958434 0.514337655 0.120940799 0.284821992 3.215792772 0.102368053 0.037739519 1.16E-08 7.93446114 0.301446852 EGQEEDDDDEEDDADEEAPKPDHFVQDPAVLR ddPTM_A459_MK2206_30min_R2 1 EGQEEDDDDEEDDADEEAPKPDHFVQDPAVLR 32 1 Q9H1I8-3;Q9H1I8 Q9H1I8-3 ASCC2 Activating signal cointegrator 1 complex subunit 2 0 46.06 0.016262 1861500 3982.4 4380.4 3612.2 3807.7 5516.6 4480 5798.3 3780.3 2246.7 5093.6 FALSE TRUE 4287.295606 4162.875706 3732.628945 3496.59873 5299.990565 4650.489539 5036.976245 4274.39819 2442.113905 4927.396249 0.870093532 0.844842894 0.757525629 0.709624019 1.075616877 0.94380263 1.022238925 0.867476041 0.495619549 1 12.26660978 -4.396074697 16.01489723 0.860042884 1.949269703 0.000310698 0.162975358 16347679.63 11380428.19 4.956344202 646974986.8 4.02E-05 4.396074697 1.089226819 EGQHYPER ddPTM_A459_MK2206_30min_R2 1 EGQHYPER 8 0 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 0 97.565 0.028334 5224900 29755 38498 32950 37919 35084 34976 37438 32674 38059 36383 FALSE TRUE 32033.06568 36586.2453 34048.53655 34820.8964 33706.42588 36307.03619 32522.34563 36944.60399 41369.30303 35195.82569 0.910138207 1.039505242 0.967402693 0.989347337 0.957682487 1.031572224 0.924039854 1.049687094 1.17540368 1 15.10311671 -7.977815413 8.645715244 1.096010465 0.979096116 0.419640572 0.055148195 0.166337809 56.96359872 0.028009492 0.013173747 1.05E-08 7.977815413 -0.116914348 EGQPSPADEKGNDS(ph)DGEGESDDPEK ddPTM_A459_MK2206_30min_R2 1 EGQPSPADEKGNDSDGEGESDDPEK 25 1 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 EGQPSPADEKGNDS(0.987)DGEGES(0.013)DDPEK 82.216 8.52E-05 25601000 103080 92087 101230 83484 91209 66638 120100 92682 67349 121590 TRUE FALSE 110971.8841 87514.09349 104604.9577 76663.09015 87627.67637 69173.95579 104330.7257 104795.8556 73206.89428 117622.5283 0.943457735 0.744024931 0.889327574 0.651772167 0.744990587 0.588101249 0.886996116 0.890950545 0.622388375 1 16.84380488 -9.879912212 11.01671373 0.99999922 0.773005618 0.244375545 0.119451669 0 0 0.113854145 0.027613686 1.32E-10 9.879912212 -0.226993602 EGQPSPADEKGNDSDGEGES(ph)DDPEK ddPTM_A459_MK2206_30min_R2 1 EGQPSPADEKGNDSDGEGESDDPEK 25 1 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 EGQPS(0.001)PADEKGNDS(0.367)DGEGES(0.632)DDPEK 63.085 0.0020059 20945000 43696 38164 48356 44334 38290 31326 55476 44082 37957 56864 TRUE FALSE 47041.39936 36268.83126 49968.16491 40711.77038 36786.54221 32518.13288 48191.93456 49843.66876 41258.43125 55008.53234 0.855165505 0.659331011 0.90837117 0.740099193 0.668742478 0.591147073 0.876081083 0.906107955 0.75003694 1 15.74736779 -8.811342842 0.66620667 0.997222672 0.749943175 0.300804398 0.10522353 1.504686143 1.338095671 0.116339381 0.043093492 1.54E-09 8.811342842 -0.247279497 EGQSPASQAGTQHPPAQATAHS(ph)QSSPEFK ddPTM_A459_MK2206_30min_R2 2 EGQSPASQAGTQHPPAQATAHSQSSPEFK 29 0 H0YJ83;A0A087WWY9;Q8TB24-4;Q8TB24 H0YJ83 RIN3 Ras and Rab interactor 3 1 EGQSPASQAGTQHPPAQAT(0.001)AHS(0.333)QS(0.333)S(0.333)PEFK;EGQSPASQAGTQHPPAQAT(0.003)AHS(0.332)QS(0.332)S(0.332)PEFK 88.244 1.62E-06 16393400 51209 82776 68911 84439 79738 76314 93742 64838 67966 77693 TRUE FALSE 55129.60041 78665.46421 71208.45835 77540.06359 76607.08547 79218.18275 81433.5628 73312.54922 73877.55983 75157.88377 0.733517199 1.046669494 0.947451615 1.031695675 1.019282098 1.054023594 1.083499943 0.975447226 0.982964875 1 16.19763682 -4.757748896 24.9993849 1.016703251 0.733516797 0.827833107 0.038599411 42.76319832 289635.904 0.009946375 0.071721523 1.75E-05 4.757748896 -0.283186454 EGRGES(ph)ENAGTNQETR ddPTM_A459_MK2206_30min_R1 3 EGRGESENAGTNQETR 16 1 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 EGRGES(0.991)ENAGT(0.008)NQETR;EGRGES(0.999)ENAGT(0.001)NQETR;EGRGES(0.999)ENAGT(0.001)NQETR 118.5 0.0061729 4817430 939.23 785.69 851.63 688.462 1057.27 878.18 607.68 757.25 278.71 293.57 TRUE FALSE 859.3435564 734.5414382 793.8237284 741.4874625 1015.156697 927.9017927 567.142776 750.6294431 307.6829019 329.9396679 2.604547558 2.226290166 2.405966319 2.247342574 3.076794929 2.812337778 1.718928735 2.275050611 0.932542922 1 8.36605843 -8.105345134 1.382656589 0.902353207 2.510656537 0.728740114 0.352750526 0.22309152 0.775782147 0.329329473 0.106927427 7.85E-09 8.105345134 1.608303331 up EGRGES(ph)ENAGTNQETR ddPTM_A459_MK2206_30min_R2 1 EGRGESENAGTNQETR 16 1 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 EGRGES(0.999)ENAGT(0.001)NQETR 227.88 1.91E-14 7381400 4985.3 11802 8688.9 11896 13236 13091 13466 8988 10353 9859.9 TRUE FALSE 5366.978401 11215.92984 8978.583589 10924.05875 12716.28813 13589.18718 11697.89802 10162.76246 11253.48523 9538.17227 0.562684155 1.175899273 0.941331666 1.145298956 1.333199671 1.424716056 1.226429728 1.065483215 1.179836651 1 13.21949712 -4.52762527 1.860253201 1.187533161 1.53E-37 0.610828588 0.141539017 1.420199715 2.844672387 0.040810318 3.685971866 2.97E-05 4.52762527 -1.187533161 EGRGESENAGT(ph)NQETR ddPTM_A459_MK2206_30min_R1 1 EGRGESENAGTNQETR 16 1 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 EGRGES(0.005)ENAGT(0.994)NQETR 173.77 4.17E-05 2327000 851.73 638.82 876.92 866.22 904.78 864.92 1000.5 1071.9 342.19 291.36 TRUE FALSE 779.2858909 597.2327019 817.3971136 932.9364145 868.7406967 913.891023 933.7584705 1062.528491 377.761875 327.4558765 2.379819533 1.823857029 2.496205359 2.849044655 2.653000783 2.790882951 2.851555088 3.244798972 1.1536268 1 8.355156711 -8.280039603 22.66433535 1.076810615 2.624401208 0.757600299 0.352762969 146.6449799 178681.1392 0.372518339 0.097212244 5.25E-09 8.280039603 1.547590593 EGRPSGEAFVELES(ph)EDEVK ddPTM_A459_MK2206_30min_R1 2 EGRPSGEAFVELESEDEVK 19 1 P31943;G8JLB6;E9PCY7;D6RBM0;E7EN40;D6RIT2;D6RIU0;D6R9T0;D6RFM3;D6RDU3;D6RJ04;D6RIH9;D6RAM1;D6RDL0;E7EQJ0 P31943;E7EQJ0 HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed" 1 EGRPSGEAFVELES(1)EDEVK;EGRPSGEAFVELES(1)EDEVK 160.2 1.01E-06 47441000 3498.1 4416.6 4205 2809.3 2470.38 2609.1 3354.7 3372 3682.6 3443.9 TRUE FALSE 3200.568226 4129.078537 3919.576316 3025.672773 2371.979533 2756.824987 3130.914084 3342.51896 4065.419448 3870.556332 0.826901342 1.066792002 1.012664842 0.781715214 0.612826511 0.712255488 0.808905443 0.863575846 1.050344989 1 11.91832523 -10.84362112 14.88691498 0.999980904 0.854902379 0.082500747 0.139736985 1.04E-10 0 0.151463865 0.036735383 1.43E-11 10.84362112 -0.145078525 EGRPSGEAFVELES(ph)EDEVK ddPTM_A459_MK2206_30min_R2 4 EGRPSGEAFVELESEDEVK 19 1 P31943;G8JLB6;E9PCY7;D6RBM0;E7EN40;D6RIT2;D6RIU0;D6R9T0;D6RFM3;D6RDU3;D6RJ04;D6RIH9;D6RAM1;D6RDL0;E7EQJ0 P31943;E7EQJ0 HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed" 1 EGRPSGEAFVELES(1)EDEVK;EGRPSGEAFVELES(1)EDEVK;EGRPSGEAFVELES(1)EDEVK;EGRPSGEAFVELES(1)EDEVK 159.53 1.14E-06 24762000 94826 92277 97709 90411 85866 65100.8 103231 81738 69149.5 108968 TRUE FALSE 102085.9515 87694.65836 100966.5693 83024.13209 82494.4694 67578.25656 89676.6457 92421.43725 75163.99852 105412.3831 0.968443635 0.831919892 0.957824559 0.787612704 0.782588032 0.641084611 0.850722117 0.876760723 0.713047142 1 16.68568483 -5.773670387 24.96145728 0.796108376 0.910648414 0.211504911 0.096958669 311.9435766 636624.8019 0.026511608 0.039645965 1.68E-06 5.773670387 0.114540038 EGRPSGEAFVELESEDEVK ddPTM_A459_MK2206_30min_R1 1 EGRPSGEAFVELESEDEVK 19 1 P31943;G8JLB6;E9PCY7;D6RBM0;E7EN40;D6RIT2;D6RIU0;D6R9T0;D6RFM3;D6RDU3;D6RJ04;D6RIH9;D6RAM1;D6RDL0;E7EQJ0 P31943;E7EQJ0 HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed" 0 120.82 0.0012205 3216700 1699.3 1819.4 1726.4 1478.3 1502.3 1268.5 1337.9 1482.3 1491.3 1006.7 FALSE TRUE 1554.765612 1700.956729 1609.216778 1592.158922 1442.46021 1340.321374 1248.651132 1469.340407 1646.325972 1131.417596 1.374174855 1.50338543 1.422301353 1.407224819 1.274914068 1.184638968 1.103616504 1.298672049 1.455100201 1 10.1439158 -6.298024036 2.663694873 1.220759354 1.437897977 0.442724537 0.115606814 0.285559218 4.013139184 0.038671385 0.047511133 5.03E-07 6.298024036 0.217138623 EGRRMTAAQPS(ph)ET(ph)TVGNMVRR ddPTM_A459_MK2206_30min_R1 1 EGRRMTAAQPSETTVGNMVRR 21 3 H0YJJ8;G3V5E5;P49770 H0YJJ8 EIF2B2 Translation initiation factor eIF-2B subunit beta 2 EGRRMTAAQPS(0.996)ET(0.996)T(0.007)VGNMVRR 61.102 0.0089848 11909000 1323.7 676.23 697.25 994.71 720.53 1239.8 844.08 646.59 506.78 422.8 TRUE FALSE 1211.112364 632.2073041 649.9226126 1071.322737 691.8297644 1309.996405 787.7729633 640.9369318 559.4615945 475.179656 2.548746245 1.330459535 1.367740821 2.254563559 1.455933047 2.756844465 1.657842362 1.34883075 1.177368575 1 8.892329261 -7.775029446 2.943275965 1.145151736 1.90661105 0.361346704 0.46175582 0.312362096 5.476138953 0.282486457 0.128228602 1.68E-08 7.775029446 0.761459313 EGS(ph)EFSFSDGEVAEK ddPTM_A459_MK2206_30min_R1 1 EGSEFSFSDGEVAEK 15 0 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 EGS(0.936)EFS(0.035)FS(0.029)DGEVAEK 197.47 2.82E-05 3910800 998.55 1299.2 1141.2 864.98 721.71 545.41 924.39 678.72 933.05 814.89 TRUE FALSE 913.6180789 1214.621844 1063.738524 931.6009095 692.9627625 576.2906429 862.7256297 672.7860226 1030.043886 915.8447253 0.997568751 1.326231194 1.161483485 1.017203991 0.756637827 0.629244922 0.941999889 0.734607084 1.12469271 1 9.838959211 -5.976511377 3.328859198 0.844415645 1.176605925 0.427457445 0.153064508 0.205253801 4.76364064 0.044891885 0.066897564 1.06E-06 5.976511377 0.332190281 EGS(ph)FESR ddPTM_A459_MK2206_30min_R2 1 EGSFESR 7 0 V9GY71;V9GYH5;P19174;P19174-2 V9GY71;P19174-2 PLCG1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1" 1 EGS(0.992)FES(0.008)R 90.601 0.029436 4020500 30296 27615 32473 27151 26982 26959 41933 23562 23986 37959 TRUE FALSE 32615.48505 26243.67926 33555.63361 24932.67645 25922.55111 27984.94364 36427.14673 26641.6343 26072.25892 36720.40094 0.888211572 0.714689344 0.913814467 0.678987043 0.705944119 0.76210888 0.992013861 0.725526781 0.710021085 1 15.16429419 EGS(ph)GGPQESSR ddPTM_A459_MK2206_30min_R2 2 EGSGGPQESSR 11 0 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 EGS(0.997)GGPQES(0.003)SR;EGS(0.996)GGPQES(0.004)SR 120.6 0.0046828 39971000 34358 31442 18823.9 20848.1 27934 15485.6 30556 31696 20259.7 31632 TRUE FALSE 36988.4749 29880.636 19451.47943 19144.74354 26837.1708 16074.91536 26543.9605 35838.77603 22021.85208 30599.85043 1.208779598 0.976496146 0.63567237 0.625648272 0.877036012 0.525326599 0.867453929 1.171207556 0.719671886 1 14.90123698 -9.56852125 11.02797428 1.000024332 0.838256411 0.043175506 0.216296173 0 0 0.218342344 0.052955797 2.70E-10 9.56852125 -0.16176792 EGS(ph)LSPVNSQK ddPTM_A459_MK2206_30min_R2 1 EGSLSPVNSQK 11 0 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 EGS(0.815)LS(0.185)PVNSQK 156 0.00054161 15007000 104180 124760 107500 121420 104610 106310 118060 88601 95622 102850 TRUE FALSE 112156.1009 118564.5998 111083.9963 111499.5976 100502.4858 110355.7015 102558.5802 100181.4549 103939.0287 99494.01292 1.127264823 1.191675723 1.116489255 1.120666403 1.010136015 1.109169269 1.030801524 1.00690938 1.044676214 1 16.60232209 -6.065226398 0.632518924 1.018119472 1.178544459 0.688936266 0.03467579 0.57451258 0.449512373 0.021754704 0.054270435 8.61E-07 6.065226398 0.160424987 EGS(ph)PANWK ddPTM_A459_MK2206_30min_R1 2 EGSPANWK 8 0 O96019-2;O96019 O96019-2 ACTL6A Actin-like protein 6A 1 EGS(1)PANWK;EGS(1)PANWK 97.813 0.019965 66019000 11412.4 12385.6 11956.5 10445.9 8276 6992.9 9283.8 9998.3 11203.6 9696.7 TRUE FALSE 10441.71545 11579.29519 11144.92609 11250.44503 7946.349395 7388.831955 8664.494641 9910.885917 12368.25431 10898.0004 0.958131315 1.062515577 1.02265789 1.032340302 0.729156644 0.67799887 0.795053617 0.909422422 1.134910429 1 13.41177583 -6.230451364 24.49879954 0.856105035 1.022293526 0.232407662 0.12596889 763.9786595 603993.1542 0.04003948 0.051684543 5.88E-07 6.230451364 0.166188491 EGS(ph)PANWK ddPTM_A459_MK2206_30min_R2 4 EGSPANWK 8 0 O96019-2;O96019 O96019-2 ACTL6A Actin-like protein 6A 1 EGS(1)PANWK;EGS(1)PANWK;EGS(1)PANWK;EGS(1)PANWK 105.4 0.014171 133106300 590624 585551 575290 506995 480945 385492 594459 486405 422207 580984 TRUE FALSE 635842.6276 556473.3888 594469.8815 465571.8867 462060.6827 400162.1682 516405.8192 549979.8036 458929.8017 562026.5397 1.13133915 0.990119415 1.05772564 0.828380608 0.822133209 0.711998705 0.918828174 0.978565539 0.81656251 1 19.10027873 -5.75641742 24.98870011 0.860872154 1.052767259 0.510867807 0.085658122 103.5171088 515081.5835 0.024124583 0.040172577 1.75E-06 5.75641742 0.191895105 EGS(ph)PAPLEPEPGAAQPK ddPTM_A459_MK2206_30min_R1 2 EGSPAPLEPEPGAAQPK 17 0 Q01167-2;Q01167 Q01167-2 FOXK2 Forkhead box protein K2 1 EGS(1)PAPLEPEPGAAQPK;EGS(1)PAPLEPEPGAAQPK 72.086 0.018663 22827000 6997.9 8260.2 9197.9 6121.1 4818 5134.9 7619.7 6324.2 9136.6 10887.6 TRUE FALSE 6402.691858 7722.459479 8573.572175 6592.548183 4626.088858 5425.633601 7111.403716 6268.908186 10086.38227 12236.43809 0.523248008 0.631103547 0.700659139 0.538763661 0.378058453 0.443399751 0.581166159 0.512314788 0.824290712 1 13.57889604 -8.437956393 2.966469685 0.997529006 0.539287955 0.761892153 0.086067434 0.125634302 2.221817155 0.093365947 0.025080059 3.65E-09 8.437956393 -0.458241051 EGS(ph)PAPLEPEPGAAQPK ddPTM_A459_MK2206_30min_R2 4 EGSPAPLEPEPGAAQPK 17 0 Q01167-2;Q01167 Q01167-2 FOXK2 Forkhead box protein K2 1 EGS(1)PAPLEPEPGAAQPK;EGS(1)PAPLEPEPGAAQPK;EGS(1)PAPLEPEPGAAQPK;EGS(1)PAPLEPEPGAAQPK 150.61 0.00016502 29827100 382290 305901 324925 272549 245856 189275 327046 256620 203152 383017 TRUE FALSE 411558.4163 290710.4012 335757.8373 250280.8749 236202.4581 196477.9928 284104.4673 290161.1151 220821.7937 370519.1867 1.110761416 0.784602827 0.906182053 0.675486949 0.637490491 0.530277513 0.766773969 0.78312035 0.595979376 1 18.49918873 -2.668372471 0.840601101 0.703703062 15.46438556 0.41579553 0.132690232 67.40450686 1.668095006 0.044832809 1778.60513 0.002145989 2.668372471 14.7606825 EGS(ph)PGSQQHPPSQK ddPTM_A459_MK2206_30min_R1 2 EGSPGSQQHPPSQK 14 0 Q13796 Q13796 SHROOM2 Protein Shroom2 1 EGS(0.99)PGS(0.009)QQHPPS(0.002)QK;EGS(0.998)PGS(0.002)QQHPPSQK 102.36 0.0050554 16510100 11752.4 10447.7 12016.9 9561.1 12503.7 10440.4 11461.9 11887.8 9136.7 9152.1 TRUE FALSE 10752.79667 9767.552831 11201.22631 10297.49758 12005.65115 11031.52643 10697.29756 11783.86622 10086.49266 10285.93124 1.045388737 0.949603162 1.088985143 1.001124481 1.167191465 1.072486892 1.039993104 1.145629495 0.980610547 1 13.32838479 -5.275607597 24.87865164 1.068374602 0.997495944 0.141357931 0.062022529 1080.223049 1896816.067 0.015298508 0.032100804 5.30E-06 5.275607597 -0.070878657 EGS(ph)PIPHDPEFGSK ddPTM_A459_MK2206_30min_R1 5 EGSPIPHDPEFGSK 14 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK 187.37 8.13E-05 376225000 34159.4 38666 39433.4 29362.8 23502.1 21745.5 32311.3 30350.7 40937.8 42230.3 TRUE FALSE 31253.96365 36148.83637 36756.77068 31624.32794 22565.96159 22976.71142 30155.87213 30085.34703 45193.43081 47462.10839 0.658503482 0.761635705 0.77444454 0.66630685 0.475452152 0.484106421 0.63536731 0.633881386 0.952200236 1 15.53448857 -8.290645878 4.501681218 0.99227803 0.634567829 0.683918957 0.092587163 0.135672656 6.611889738 0.097750632 0.02749817 5.12E-09 8.290645878 -0.357710202 EGS(ph)PIPHDPEFGSK ddPTM_A459_MK2206_30min_R2 8 EGSPIPHDPEFGSK 14 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(0.999)PIPHDPEFGS(0.001)K;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK 211.13 3.84E-06 1113478900 727828 724476 724773 634270 575591 419300 745949 600853 474354 743734 TRUE FALSE 783551.0713 688499.5753 748936.5701 582448.1121 552990.4052 435256.7553 648005.0003 679386.5501 515612.4535 719466.0205 1.089073075 0.956959128 1.040961698 0.809556109 0.768612262 0.604971942 0.90067492 0.944292754 0.71665991 1 19.45656703 -5.764445664 24.93292319 0.810535624 1.021794109 0.421569921 0.111282459 71.32132251 591518.8219 0.0314597 0.049037791 1.72E-06 5.764445664 0.211258485 EGS(ph)QGELTPANSQSR ddPTM_A459_MK2206_30min_R1 3 EGSQGELTPANSQSR 15 0 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 EGS(0.968)QGELT(0.031)PANS(0.001)QSR;EGS(0.975)QGELT(0.025)PANSQSR;EGS(1)QGELTPANSQSR 197.51 2.81E-05 24267000 4414.2 4916.6 4738.05 3826.6 2723.19 2873.54 3964.19 3780.8 3750.58 4851.79 TRUE FALSE 4038.74911 4596.528446 4416.444367 4121.325395 2614.719576 3036.237352 3699.746118 3747.744864 4140.466213 5452.866374 0.740665337 0.84295637 0.809930789 0.755808984 0.479512865 0.55681492 0.678495651 0.68729813 0.759319215 1 12.41279909 -10.35040687 18.49433123 1 0.698330132 0.420553649 0.10517123 0 0 0.11626524 0.028198463 4.46E-11 10.35040687 -0.301669868 EGS(ph)QGELTPANSQSR ddPTM_A459_MK2206_30min_R2 4 EGSQGELTPANSQSR 15 0 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 EGS(1)QGELTPANSQSR;EGS(1)QGELTPANSQSR;EGS(1)QGELTPANSQSR;EGS(0.987)QGELT(0.012)PANSQSR 159.64 0.00013585 57459200 74597 80050 78016 70527 73557 57211.1 82090 63428.4 54112.9 69409.6 TRUE FALSE 80308.20368 76074.8334 80617.0145 64764.7185 70668.78259 59388.3085 71311.48439 71718.70966 58819.54223 67144.77044 1.196045547 1.132997148 1.200644726 0.964553428 1.052483792 0.884481518 1.062055674 1.068120558 0.876010773 1 16.03498742 -5.761771836 24.99998972 0.99126077 1.172205967 0.636563458 0.065617126 5.611020689 421994.1014 0.017698368 0.028208556 1.73E-06 5.761771836 0.180945197 EGSALSHVR ddPTM_A459_MK2206_30min_R2 1 EGSALSHVR 9 0 K7ELG9;Q3MHD2;Q3MHD2-2 K7ELG9 LSM12 Protein LSM12 homolog 0 109.29 0.016181 1404700 20015 27957 22854 30988 30288 34597 25865 26109 30115 25857 FALSE TRUE 21547.36379 26568.69603 23615.94095 28456.18127 29098.74094 35913.61308 22468.89443 29521.53595 32734.34826 25013.28821 0.861436674 1.062183261 0.944135803 1.137642562 1.163331294 1.435781365 0.898278317 1.18023411 1.308678331 1 14.6104071 -5.830970417 4.493591442 1.171660524 0.965882457 0.290300277 0.14627431 0.270379729 10.46988914 0.041269871 0.064283338 1.48E-06 5.830970417 -0.205778067 EGSCIFPEELS(ph)PK ddPTM_A459_MK2206_30min_R1 3 EGSCIFPEELSPK 13 0 Q86YC2;H3BN63 Q86YC2 PALB2 Partner and localizer of BRCA2 1 EGSCIFPEELS(1)PK;EGSCIFPEELS(1)PK;EGSCIFPEELS(1)PK 150.9 0.00047993 25659000 6559.3 8194.6 8254.1 7074.9 5125.3 4724.57 5736.1 5912.72 6717.7 6180.6 TRUE FALSE 6001.397091 7661.130051 7693.834689 7619.810024 4921.148448 4992.071071 5353.455235 5861.025712 7416.028955 6946.299389 0.863970404 1.102908127 1.107616338 1.096959632 0.708456139 0.71866627 0.770691693 0.843762324 1.067622994 1 12.76202888 -6.248056783 24.68349504 0.833035925 1.051777724 0.35029458 0.125918935 698.9078077 1289097.817 0.038502184 0.049401681 5.65E-07 6.248056783 0.218741799 EGSCIFPEELS(ph)PK ddPTM_A459_MK2206_30min_R2 4 EGSCIFPEELSPK 13 0 Q86YC2;H3BN63 Q86YC2 PALB2 Partner and localizer of BRCA2 1 EGSCIFPEELS(1)PK;EGSCIFPEELS(1)PK;EGSCIFPEELS(1)PK;EGSCIFPEELS(1)PK 157.2 0.000365 11502100 72903.3 78069 72028 94205 76987 52068.8 77647 60388.5 53395.7 78992 TRUE FALSE 78484.8327 74192.20698 74429.37757 86508.15015 73964.10355 54050.31467 67451.85563 68281.48429 58039.96147 76414.49751 1.027093487 0.970917946 0.974021684 1.132090807 0.967932866 0.70733063 0.88271019 0.893567144 0.759541231 1 16.22155875 -6.537487612 24.62344382 0.843388189 1.022333449 0.500128994 0.084368415 158.5027134 267156.3306 0.026817954 0.026828884 2.90E-07 6.537487612 0.17894526 EGSEFS(ph)FSDGEVAEK ddPTM_A459_MK2206_30min_R1 1 EGSEFSFSDGEVAEK 15 0 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 EGS(0.442)EFS(0.556)FS(0.002)DGEVAEK 230.23 7.07E-14 4068300 686.13 1158.6 1004.8 782.76 699.65 496.17 856.09 662.54 906.4 714.49 TRUE FALSE 627.7710405 1083.174929 936.5969755 843.0483108 671.781459 524.2627166 798.9817981 656.7474826 1000.623524 803.0064153 0.781775872 1.348899472 1.166363005 1.049864976 0.836582929 0.652874879 0.994988063 0.817860817 1.24609655 1 9.649267703 -6.067554325 4.753508049 0.906554674 1.122511077 0.138561741 0.194551328 0.350579775 15.3293814 0.057284094 0.076601426 8.56E-07 6.067554325 0.215956403 EGSEFSFS(ph)DGEVAEK ddPTM_A459_MK2206_30min_R1 3 EGSEFSFSDGEVAEK 15 0 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 EGSEFS(0.076)FS(0.924)DGEVAEK;EGSEFS(0.003)FS(0.997)DGEVAEK;EGSEFS(0.029)FS(0.971)DGEVAEK 183.6 2.09E-05 37079000 2424.75 2102.87 2093.88 1723.61 1965.18 1810.99 2319.23 1939.14 1939.12 1915.67 TRUE FALSE 2218.51228 1965.972781 1951.753259 1856.362741 1886.902719 1913.526689 2164.518398 1922.186303 2140.698463 2152.997662 1.030429488 0.913132799 0.906528276 0.862222367 0.876407231 0.888773231 1.005351021 0.892795351 0.994287407 1 11.07213104 -7.247216963 24.67220749 0.964174727 0.908671402 0.231650852 0.052368582 1119.178936 1941487.594 0.020445995 0.015760749 5.66E-08 7.247216963 -0.055503325 EGSEFSFS(ph)DGEVAEK ddPTM_A459_MK2206_30min_R2 2 EGSEFSFSDGEVAEK 15 0 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 EGS(0.026)EFS(0.379)FS(0.595)DGEVAEK;EGSEFS(0.181)FS(0.819)DGEVAEK 96.489 0.01014 13805900 14142.6 15258.5 15627.6 19377.5 16456.8 16180.6 16310.5 16051.1 14041.7 19367.8 TRUE FALSE 15225.36833 14500.78508 16148.61638 17794.29626 15810.62334 16796.36407 14168.91176 18149.03388 15263.02168 18735.83027 0.812633767 0.7739601 0.861910903 0.949746876 0.843870974 0.896483573 0.756246804 0.968680524 0.814643465 1 14.19351229 -14.52287875 0.163034268 1.528192127 0.819394144 0.312114017 0.065787852 167.6671561 1.549069625 28.79774358 0.263477344 3.00E-15 14.52287875 -0.708797984 EGSITQGT(ph)PLKYDTGASTTGSK ddPTM_A459_MK2206_30min_R1 2 EGSITQGTPLKYDTGASTTGSK 22 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 EGS(0.017)IT(0.066)QGT(0.915)PLKY(0.001)DTGASTTGSK;EGS(0.001)IT(0.009)QGT(0.99)PLKYDTGASTTGSK 95.957 0.00028665 16078700 3420.7 3192.1 2873.6 2710.7 2477.3 2532 3166.3 2926.1 2365.4 2397.1 TRUE FALSE 3129.751502 2984.29371 2678.548038 2919.478584 2378.623895 2675.359652 2955.081904 2900.517416 2611.291795 2694.070845 1.161718337 1.107726515 0.994238159 1.083668081 0.88291067 0.993054677 1.096883517 1.076629971 0.969273618 1 11.39557207 -5.072685599 2.947169507 1.014887681 1.159177575 0.409756488 0.060175459 0.287839711 4.625552068 0.016587653 0.069806708 8.46E-06 5.072685599 0.144289895 EGSITQGT(ph)PLKYDTGASTTGSK ddPTM_A459_MK2206_30min_R2 1 EGSITQGTPLKYDTGASTTGSK 22 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 EGS(0.014)IT(0.048)QGT(0.89)PLKY(0.002)DT(0.015)GAS(0.022)T(0.008)T(0.001)GSK 77.221 0.0022068 15252000 17459 22644 21065 21970 22806 15587 21018 18601 12938 17478 TRUE FALSE 18795.67446 21519.53189 21767.29659 20174.98072 21910.52185 16180.17421 18258.31135 21032.21457 14063.32385 16907.69429 1.111663964 1.272765613 1.287419574 1.193242578 1.295890585 0.956971065 1.0798818 1.243943391 0.831770649 1 14.04539231 -6.757148749 24.99988291 1.041345365 1.235354161 0.473634405 0.1096033 104.5906968 609410.4186 0.035913915 0.034726669 1.75E-07 6.757148749 0.194008796 EGSLS(ph)PVNSQK ddPTM_A459_MK2206_30min_R1 2 EGSLSPVNSQK 11 0 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 EGS(0.003)LS(0.956)PVNS(0.041)QK;EGS(0.044)LS(0.946)PVNS(0.01)QK 158.86 0.00057871 11264000 5152.6 4689.8 4715.4 4185.7 4902.7 3987.8 4562.5 4439.6 4329.5 3966.6 TRUE FALSE 4714.344313 4384.493168 4395.331786 4508.083339 4707.415077 4213.58579 4258.14395 4400.785045 4779.567018 4458.012354 1.057499158 0.983508528 0.985939795 1.011231684 1.055944825 0.945171403 0.955166476 0.987163044 1.072129604 1 12.1221849 -6.758299736 24.99955519 0.988826324 1.014613989 0.097634942 0.039312048 224.3740165 1786576.745 0.013825413 0.013277285 1.74E-07 6.758299736 0.025787665 EGSQGELT(ph)PANSQSR ddPTM_A459_MK2206_30min_R1 2 EGSQGELTPANSQSR 15 0 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 EGSQGELT(1)PANSQSR;EGS(0.001)QGELT(0.992)PANS(0.008)QSR 273.52 7.29E-45 55825000 7096.6 6588.9 6822.1 5120.5 6416.4 6096.8 7084.2 5595.7 5448 5205.3 TRUE FALSE 6492.996904 6159.961412 6359.034859 5514.881797 6160.821201 6441.995547 6611.625944 5546.777385 6014.339096 5850.171862 1.109881394 1.052953923 1.086982572 0.942687143 1.053100891 1.10116347 1.130159267 0.94813922 1.028061951 1 12.51426329 -6.78487893 0.009014265 2.32E-07 2.093149843 0.121932361 0.058269536 7347.943208 26.39785634 2990.195814 3137.232395 1.64E-07 6.78487893 2.093149611 EGSQGELT(ph)PANSQSR ddPTM_A459_MK2206_30min_R2 2 EGSQGELTPANSQSR 15 0 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 EGSQGELT(1)PANSQSR;EGSQGELT(0.73)PANS(0.269)QS(0.001)R 147.37 0.0007609 71861000 55589 70656 60578 76975 64978 74239 76740 50323 62647 55652 TRUE FALSE 59844.93658 67147.32578 62597.64029 70685.89627 62426.63723 77064.21717 66663.94582 56900.38888 68095.92282 53836.0798 1.111613936 1.247255113 1.162745143 1.312983719 1.159568777 1.431460416 1.238276377 1.056919246 1.264875211 1 15.71628574 -10.34140382 5.461317793 0.999999922 1.222538312 0.30081526 0.100873244 9.57E-08 2.09E-08 0.096991399 0.023523861 4.56E-11 10.34140382 0.22253839 EGSRPMMGDHR ddPTM_A459_MK2206_30min_R1 1 EGSRPMMGDHR 11 1 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 0 84.605 0.02871 1306200 1844.4 1985.3 1869.3 1739.4 1993.6 1546.5 2077.7 1786.8 639.19 1460.3 FALSE TRUE 1687.524095 1856.056609 1742.417124 1873.368889 1914.19069 1634.061494 1939.100424 1771.178196 705.6360879 1641.212989 1.028217609 1.130905386 1.06166423 1.141453853 1.166326798 0.995642555 1.181504434 1.079188508 0.429947906 1 10.68054676 -8.145463202 8.72430738 0.716581794 1.102422512 0.548114847 0.139230836 0.194565701 13.18133956 0.084690707 0.031863745 7.15E-09 8.145463202 0.385840718 EGSRPMMGDHR ddPTM_A459_MK2206_30min_R2 2 EGSRPMMGDHR 11 1 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 0 ; 76.332 0.041081 1874720 7932.1 7572.2 6565.1 9093.6 8918.3 9907.1 9055.5 6128.4 8774.3 7583 FALSE TRUE 8539.387675 7196.175559 6783.977157 8350.623791 8568.122731 10284.12163 7866.501972 6929.402922 9537.472754 7335.567331 1.164107327 0.98099782 0.924806065 1.138374636 1.16802455 1.401953137 1.072378129 0.944630812 1.300168388 1 12.84069283 -4.445761108 21.49221709 1.105566845 3.824248935 0.01483804 0.147319404 2157.873296 623681.3948 0.037104038 10530.5496 3.58E-05 4.445761108 2.71868209 EGSTQQLQT(ph)TSPKPLVQQPILPVVK ddPTM_A459_MK2206_30min_R2 1 EGSTQQLQTTSPKPLVQQPILPVVK 25 1 A0A087X0H9;Q5T8P6-3;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 EGS(0.038)T(0.034)QQLQT(0.333)T(0.333)S(0.262)PKPLVQQPILPVVK 60.991 0.0085915 10928000 32434 25916 24530 20421 24588 18115 33597 21911 21060 25715 TRUE FALSE 34917.17198 24629.04913 25347.81796 18752.53898 23622.55158 18804.37902 29185.67354 24774.84293 22891.76073 24875.92166 1.403653399 0.990075844 1.018970003 0.753842983 0.94961513 0.755926927 1.173249938 0.995936684 0.920237692 1 14.60246236 -4.670958806 2.55080575 0.941301824 1.600471301 0.575241442 0.117012108 0.60944713 3.769200871 0.030721646 0.986034909 2.13E-05 4.670958806 0.659169478 EGSTQQLQTT(ph)SPK ddPTM_A459_MK2206_30min_R1 2 EGSTQQLQTTSPK 13 0 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 EGSTQQLQT(0.001)T(0.5)S(0.5)PK;EGSTQQLQT(0.009)T(0.958)S(0.032)PK 209.22 2.04E-05 21967100 8967.1 12148.8 11073.1 9569 6836.2 5941.5 6952.5 7793.8 8346.5 8077 TRUE FALSE 8204.401057 11357.91091 10321.48882 10306.00604 6563.899678 6277.902595 6488.711411 7725.659628 9214.148543 9077.639738 0.903803334 1.251196483 1.137023403 1.135317807 0.723084399 0.691578734 0.7148016 0.851064798 1.015037918 1 13.14810152 -6.252933076 24.78418997 0.812207373 1.119303091 0.504377008 0.132024531 435.6655269 1269365.743 0.03995615 0.050723452 5.59E-07 6.252933076 0.307095717 EGSTQQLQTT(ph)SPK ddPTM_A459_MK2206_30min_R2 1 EGSTQQLQTTSPK 13 0 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 EGSTQQLQT(0.002)T(0.499)S(0.499)PK 119.17 0.0076731 6088100 59500 54179 48148 48674 41102 31249 55471 38270 30463 55436 TRUE FALSE 64055.36575 51488.54964 49753.23029 44697.1785 39488.12896 32438.20259 48187.59107 43272.0204 33112.61668 53627.12786 1.194458258 0.960121336 0.927762352 0.833480745 0.736346147 0.604884205 0.898567441 0.806905425 0.617460192 1 15.71067537 -4.669218744 0.880897939 0.768300431 1.479009649 0.547492709 0.114603364 1.981592513 1.049651012 0.039995325 1.428940463 2.14E-05 4.669218744 0.710709218 EGSTQQLQTTS(ph)PK ddPTM_A459_MK2206_30min_R2 3 EGSTQQLQTTSPK 13 0 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 EGSTQQLQT(0.005)T(0.11)S(0.885)PK;EGSTQQLQTT(0.089)S(0.911)PK;EGSTQQLQTT(0.206)S(0.794)PK 191.19 0.00011339 34660100 188698 175018 167249 151176 147043 106236 189273 145492 105573 171186 TRUE FALSE 203144.864 166326.8606 172824.9982 138824.4372 141269.353 110278.8854 164421.2277 164508.3039 114755.5487 165600.2148 1.226718602 1.004387952 1.043627862 0.838310731 0.853074696 0.665934435 0.992880522 0.993406344 0.69296739 1 17.33734502 -4.847372768 1.010753945 0.860586168 1.360988054 0.465400928 0.117802976 1.587362464 1.402564716 0.039373414 0.845312358 1.42E-05 4.847372768 0.500401887 EGSVLDILKSPGFAS(ph)PK ddPTM_A459_MK2206_30min_R1 2 EGSVLDILKSPGFASPK 17 1 P49790-3;P49790 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 EGSVLDILKS(0.048)PGFAS(0.952)PK;EGSVLDILKS(0.094)PGFAS(0.906)PK 88.768 0.0054435 53779000 11037.8 9979.9 9895.4 8944.2 8201.3 6614.7 5991.9 7334.4 5320.2 3727.4 TRUE FALSE 10098.97715 9330.206696 9223.727818 9633.083834 7874.624854 6989.218598 5592.191284 7270.276114 5873.253829 4189.178452 2.410729756 2.227216339 2.201798735 2.299516228 1.879753977 1.668398393 1.334913599 1.735489714 1.40200612 1 12.03245163 -6.75730635 0.319145428 1.006405258 2.674717487 0.891869363 0.147295359 0.727166912 0.153705586 0.207249663 0.438549862 1.75E-07 6.75730635 1.668312229 up EGT(ph)GQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR ddPTM_A459_MK2206_30min_R2 1 EGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 48 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 EGT(0.47)GQQERES(0.47)PRPLQLPGAEGPAIS(0.06)DGEEGGGEPGAGGGAAGAAGAGR 50.171 0.00098035 3971400 1893.3 2151.7 1559.7 5772.8 4823.6 3804.1 4736.7 4406.2 4108.9 3216.7 TRUE FALSE 2038.252504 2044.849707 1611.69962 5301.143774 4634.201227 3948.867691 4114.7656 4982.105469 4466.284695 3111.739342 0.655020321 0.657140423 0.517941718 1.703595061 1.489263951 1.269022645 1.322336207 1.601067738 1.435301676 1 11.6035055 -5.753378502 24.99997387 1.42264386 0.614744566 0.794656049 0.18451205 73.34009921 227454.2224 0.049239136 0.08340409 1.76E-06 5.753378502 -0.807899294 EGT(ph)PPPPPPSR ddPTM_A459_MK2206_30min_R2 1 EGTPPPPPPSR 11 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 EGT(1)PPPPPPSR 98.368 0.042837 49912000 79636 72764 83901 53595 55092 45182 79057 52449 45420 84509 TRUE FALSE 85732.99339 69150.64557 86698.21746 49216.11706 52928.81126 46901.43267 68676.72094 59304.26438 49370.5495 81751.47825 1.048702668 0.845864161 1.060509477 0.602021127 0.647435525 0.573707457 0.840067023 0.725421309 0.603910175 1 16.3189572 -5.760535263 24.99999896 0.698513291 0.971109329 0.462586108 0.133342129 20.30669536 561471.1813 0.035266436 0.05683509 1.74E-06 5.760535263 0.272596038 EGTAPS(ph)ENGETK ddPTM_A459_MK2206_30min_R1 2 EGTAPSENGETK 12 0 Q15651;A0A087WZE9 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 EGT(0.041)APS(0.959)ENGET(0.001)K;EGT(0.001)APS(0.999)ENGETK 175.6 0.00010345 23273000 7984.8 8811.5 8229.8 7026.5 6401.9 6217.1 8094.3 6127 7553.3 10583.2 TRUE FALSE 7305.65083 8237.869748 7671.184106 7567.682247 6146.898767 6569.106829 7554.344016 6073.432285 8338.492565 11894.32672 0.614213062 0.692588151 0.644944795 0.636243011 0.516792494 0.552289086 0.635121617 0.510615895 0.701047883 1 13.53798599 -8.584719891 7.827169212 0.99999921 0.602990212 0.82556653 0.055306162 0.662443165 83.83358383 0.056853141 0.014697371 2.60E-09 8.584719891 -0.397008999 EGTAPS(ph)ENGETK ddPTM_A459_MK2206_30min_R2 2 EGTAPSENGETK 12 0 Q15651;A0A087WZE9 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 EGT(0.024)APS(0.976)ENGETK;EGT(0.131)APS(0.869)ENGETK 195.94 0.00016555 36191000 102581 82475 79741 87103 70134 57366 96377 74466 59101 88832 TRUE FALSE 110434.6802 78379.41143 82399.52514 79986.40627 67380.18676 59549.10333 83722.58413 84198.96188 64241.49815 85933.41911 1.285119123 0.912094645 0.958876372 0.93079511 0.784097589 0.692967927 0.974272698 0.979816266 0.747572933 1 16.39093168 -2.29454518 1.204572515 0.87089554 200 0.57364425 0.102670339 543.275278 2.182961882 0.031109258 297316.8775 0.005075219 2.29454518 199.1291045 EGTETFADHR ddPTM_A459_MK2206_30min_R1 2 EGTETFADHR 10 0 Q9Y490 Q9Y490 TLN1 Talin-1 0 ; 147.74 0.0011423 28955000 16063.7 15958 15630.8 12920.2 17091.3 15739.8 16261.8 14242.1 13251.1 12126.3 FALSE TRUE 14697.39796 14919.1313 14569.82485 13915.31604 16410.51733 16630.97387 15177.00499 14117.58282 14628.59926 13628.59759 1.078423357 1.094693067 1.069062664 1.021038001 1.204123698 1.220299723 1.113614581 1.03587935 1.073375244 1 13.73434949 -7.757670798 22.69713907 1.040970444 1.115883969 0.269370372 0.058727304 47.4077695 285544.3127 0.032299894 0.017677061 1.75E-08 7.757670798 0.074913525 EGTETFADHR ddPTM_A459_MK2206_30min_R2 2 EGTETFADHR 10 0 Q9Y490 Q9Y490 TLN1 Talin-1 0 ; 166.86 0.00044023 40012000 145533 162925 148054 177007 169343 173504 182576 136750 165307 174901 FALSE TRUE 156675.1184 154834.3814 152990.0465 162544.9619 162693.7429 180106.8163 158603.5519 154623.6945 179685.1041 169193.9947 0.926008743 0.915129297 0.904228585 0.960701721 0.961581073 1.064498871 0.937406509 0.913884058 1.062006393 1 17.36831884 -6.013504939 2.375516833 0.986913003 0.915173171 0.349228411 0.045375345 0.365753723 4.133228706 0.01442075 0.021889429 9.69E-07 6.013504939 -0.071739832 EGTGQQERES(ph)PRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR ddPTM_A459_MK2206_30min_R1 1 EGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 48 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 2 EGT(0.158)GQQERES(0.843)PRPLQLPGAEGPAIS(0.998)DGEEGGGEPGAGGGAAGAAGAGR 59.395 1.03E-05 8481300 407.01 223.2 303.54 351.06 363.35 276.06 365.42 257.93 284.01 216.4 TRUE FALSE 372.3916622 208.6696394 282.9365505 378.098702 348.8770001 291.6902786 341.0434985 255.6749452 313.5338558 243.2092657 1.53115738 0.857983921 1.163346099 1.554622933 1.434472486 1.199338675 1.402263592 1.051254953 1.289152594 1 7.926054383 -8.838454606 0.814326549 1.003569608 1.286203275 0.144195813 0.206094591 2.414912215 3.022026248 0.210075524 0.072555158 1.45E-09 8.838454606 0.282633667 EGTGQQERES(ph)PRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR ddPTM_A459_MK2206_30min_R2 1 EGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 48 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 2 EGT(0.336)GQQERES(0.665)PRPLQLPGAEGPAIS(0.999)DGEEGGGEPGAGGGAAGAAGAGR 53.838 3.93E-05 12339000 7643.5 8145.1 7522.7 11086 6654 6034.6 8258.4 5146.6 6802.4 4306.2 TRUE FALSE 8228.692237 7740.626178 7773.503063 10180.23834 6392.730526 6264.250932 7174.06216 5819.278291 7394.060456 4165.689047 1.975349611 1.858186267 1.866078571 2.443830594 1.534615391 1.503773052 1.722178991 1.396954556 1.774990973 1 12.02433944 -6.384674612 11.05520635 1.519598757 2.010880244 0.532147165 0.249910943 0.403788552 34.51667103 0.074093453 0.084003877 4.12E-07 6.384674612 0.491281487 EGTGSTATSSSS(ph)TAGAAGK ddPTM_A459_MK2206_30min_R1 2 EGTGSTATSSSSTAGAAGK 19 0 E5RGU4;A0A087WZK9;B3KS98;O15372;E5RHC7;E5RH59;E5RFW7;E5RFH0 E5RGU4 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 EGTGSTATSSS(0.062)S(0.936)T(0.003)AGAAGK;EGTGSTATSSS(0.124)S(0.84)T(0.036)AGAAGK 387.62 1.27E-267 12554100 5311.8 4761.5 4956.6 4815.1 5072.2 4991.8 5456 5448.7 4577.8 4232.5 TRUE FALSE 4860.003517 4451.525485 4620.159802 5185.959836 4870.163533 5274.431402 5092.040195 5401.06259 5053.678692 4756.854054 1.021684387 0.935812921 0.971263728 1.090207893 1.023820256 1.108806649 1.070463827 1.135427434 1.062399358 1 12.21579205 -5.756780285 24.99695004 1.075495604 0.972209572 0.514250719 0.041542786 81.64941163 438058.7238 0.010932517 0.018162075 1.75E-06 5.756780285 -0.103286032 EGTGSTATSSSS(ph)TAGAAGK ddPTM_A459_MK2206_30min_R2 2 EGTGSTATSSSSTAGAAGK 19 0 E5RGU4;A0A087WZK9;B3KS98;O15372;E5RHC7;E5RH59;E5RFW7;E5RFH0 E5RGU4 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 EGTGSTAT(0.003)S(0.035)S(0.035)S(0.028)S(0.87)T(0.028)AGAAGK;EGTGSTAT(0.008)S(0.123)S(0.123)S(0.305)S(0.413)T(0.028)AGAAGK 114.96 0.00047831 9578400 50857 67566 59958 76445 74452 82687 85203 59599 67969 71472 TRUE FALSE 54750.65102 64210.77069 61956.96979 70199.19896 71528.64039 85833.71173 74015.74375 67388.79393 73880.82076 69139.87449 0.791882418 0.928708233 0.896110533 1.015321469 1.034549757 1.24145021 1.070521812 0.974673362 1.068570363 1 16.07723036 -5.74820005 1.578186893 1.072968976 0.85294194 0.586950894 0.073047556 0.295753251 1.489097814 0.024889634 0.056161072 1.79E-06 5.74820005 -0.220027037 EGTLTQVPLAPPPPGAPPS(ph)PAPAR ddPTM_A459_MK2206_30min_R1 1 EGTLTQVPLAPPPPGAPPSPAPAR 24 0 P48634 P48634 PRRC2A Protein PRRC2A 1 EGTLTQVPLAPPPPGAPPS(1)PAPAR 99.29 4.54E-06 3138400 672.35 805.27 754.16 692.31 653.81 585.65 599.34 536.79 441.05 620.72 TRUE FALSE 615.1631018 752.8467766 702.9697204 745.6318362 627.7673632 618.8089969 559.3591222 532.0969016 486.8987258 697.6194798 0.881803217 1.079165359 1.007669282 1.06882313 0.899870748 0.887029412 0.801811214 0.762732287 0.697943134 1 9.446296515 -6.735039567 1.679138837 0.798248217 1.012798253 0.459855958 0.090386188 0.285263238 1.665759358 0.036741507 0.034169053 1.84E-07 6.735039567 0.214550036 EGTQASEGYFSQS(ph)QEEEFAQSEELCAK ddPTM_A459_MK2206_30min_R1 1 EGTQASEGYFSQSQEEEFAQSEELCAK 27 0 Q16643-3;Q16643;Q16643-2 Q16643-3 DBN1 Drebrin 1 EGTQASEGYFS(0.005)QS(0.995)QEEEFAQSEELCAK 140.94 1.36E-12 7956300 635.31 768.46 602.51 639.71 642.57 673.32 689.99 517.82 641.83 518.98 TRUE FALSE 581.2735484 718.4331143 561.6132999 688.980575 616.9750762 711.4427965 643.9620261 513.2927543 708.5505253 583.2751605 0.996568323 1.231722458 0.962861678 1.181227355 1.057777046 1.219737861 1.104045003 0.880018196 1.214779187 1 9.188032826 -9.196841589 0.441873676 0.994868221 1.104556962 0.042218282 0.115327988 8.970395625 2.878508764 0.269737565 0.068225923 6.36E-10 9.196841589 0.109688741 EGTQASEGYFSQS(ph)QEEEFAQSEELCAK ddPTM_A459_MK2206_30min_R2 1 EGTQASEGYFSQSQEEEFAQSEELCAK 27 0 Q16643-3;Q16643;Q16643-2 Q16643-3 DBN1 Drebrin 1 EGTQASEGYFS(0.019)QS(0.98)QEEEFAQSEELCAK 122.04 1.33E-09 0 8909.2 11981 10425 11000 9828.5 7460.7 12531 12379 10473 11254 TRUE FALSE 9591.295202 11386.04096 10772.5643 10101.26481 9442.583706 7744.622166 10885.66465 13996.9778 11383.92261 10886.7829 0.881003625 1.0458591 0.989508507 0.927846629 0.867343805 0.711378397 0.999897283 1.285685398 1.045664519 1 13.41029007 -7.528808963 24.92644437 1.127963301 0.908777243 0.424643505 0.107308424 142.7647341 600069.9051 0.051855141 0.030048033 2.96E-08 7.528808963 -0.219186059 EGTSQLAS(ph)PLK ddPTM_A459_MK2206_30min_R2 2 EGTSQLASPLK 11 0 Q4KWH8-2;A0A2U3TZV8;Q4KWH8 Q4KWH8-2 PLCH1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1" 1 EGTS(0.003)QLAS(0.997)PLK;EGTSQLAS(1)PLK 115.37 0.0061963 13107300 75673 77859 75816 78604 78201 64520 84437 72220 49232 83788 TRUE FALSE 81466.58306 73992.63528 78343.6676 72181.80176 75130.43581 66975.35381 73350.32047 81659.40197 53514.11037 81054.00442 1.00509017 0.912880687 0.966561346 0.890539613 0.926918248 0.826305305 0.904956159 1.007469064 0.660227841 1 16.30659584 -3.77594752 0.511269118 0.882379148 1.247070277 0.118457355 0.093858133 25.55681124 2.337583558 0.050456568 6.978629933 0.000167515 3.77594752 0.364691129 EGVHGGLINK ddPTM_A459_MK2206_30min_R1 2 EGVHGGLINK 10 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 ; 140.17 0.0020337 50451000 17613.3 18028.4 16966.9 14305.4 15519.5 15704.1 17859.7 14435.8 17262.6 19093.5 FALSE TRUE 16115.19634 16854.74788 15815.2341 15407.20439 14901.32545 16593.25257 16668.312 14309.58932 19057.10904 21458.94693 0.750977967 0.78544152 0.736999544 0.717985111 0.694410844 0.773255679 0.776753494 0.66683558 0.888072891 1 14.38929166 -8.49100244 4.351034528 0.999336541 0.74041044 0.851803481 0.035870962 0.061394583 2.915140894 0.035033794 0.009155552 3.23E-09 8.49100244 -0.258926101 EGVHGGLINK ddPTM_A459_MK2206_30min_R2 4 EGVHGGLINK 10 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 ;;; 120.27 0.0072218 76368400 646744 568210 559215 701724 584878 531546 689463 598309 457577 622159 FALSE TRUE 696259.2179 539993.5177 577858.949 644390.9045 561912.7509 551774.3555 598935.6799 676510.0406 497376.2204 601858.0028 1.156849647 0.897210829 0.960125057 1.07066933 0.933630106 0.916784944 0.995144498 1.124035964 0.826401274 1 19.19906362 -4.745831392 24.98377015 0.974137377 1.156850152 0.32341762 0.081097674 1091.572848 1747189.101 0.019560723 0.477714401 1.80E-05 4.745831392 0.182712776 EGVHGGLINKK ddPTM_A459_MK2206_30min_R1 1 EGVHGGLINKK 11 1 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 101.97 0.019945 25412000 2506.8 3033.7 2736.9 2703.7 2850.8 2746 2890.9 3426.2 2144.2 1826.6 FALSE TRUE 2293.583496 2836.205579 2551.126853 2911.939442 2737.246599 2901.476147 2698.053336 3396.245095 2367.097263 2052.892998 1.117244541 1.381565226 1.242698405 1.418456512 1.33336058 1.413359659 1.314268858 1.654370246 1.15305438 1 11.00344272 -4.756074835 24.39043581 1.347184877 1.117244041 0.107592982 0.165957709 235.1445961 1068947.453 0.037841281 0.313608682 1.75E-05 4.756074835 -0.229940836 EGVHGGLINKK ddPTM_A459_MK2206_30min_R2 1 EGVHGGLINKK 11 1 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 80.916 0.028933 63798000 613140 870810 720750 828750 858380 753180 867380 667690 778640 714430 FALSE TRUE 660082.4698 827566.8417 744779.4453 761038.474 824675.6882 781842.7927 753491.9641 754959.3755 846364.6997 691118.2076 0.955093445 1.197431688 1.07764408 1.101169765 1.19324839 1.131272167 1.090250489 1.092373732 1.224630881 1 19.39857296 -4.745726734 24.99586852 1.125313189 0.955092974 0.384578721 0.06370937 915.4858912 1456286.589 0.014855079 0.370672119 1.80E-05 4.745726734 -0.170220216 EGVIEAGAFQGSPAPPLPS(ph)VMSPSR ddPTM_A459_MK2206_30min_R2 1 EGVIEAGAFQGSPAPPLPSVMSPSR 25 0 P53367 P53367 ARFIP1 Arfaptin-1 1 EGVIEAGAFQGSPAPPLPS(0.532)VMS(0.37)PS(0.098)R 91.592 2.41E-05 3508400 12452 14183 14046 14879 11520 16407 12898 13063 11563 13666 TRUE FALSE 13405.33469 13478.69284 14514.28663 13663.3381 11067.66692 17031.37988 11204.47711 14770.37895 12568.72884 13220.07954 1.014013165 1.01956216 1.097897073 1.03352919 0.837186106 1.288296325 0.847534773 1.117268539 0.950730198 1 13.69044324 EGVNQPAAVVMEDS(ph)SPHEALR ddPTM_A459_MK2206_30min_R1 1 EGVNQPAAVVMEDSSPHEALR 21 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 EGVNQPAAVVMEDS(0.601)S(0.399)PHEALR 90.601 0.00047902 12819000 2711.9 2064.4 2213 2051.9 2646.6 2239.3 2300.5 2055 2193.6 2084.1 TRUE FALSE 2481.238664 1930.007185 2062.787726 2209.937694 2541.180318 2366.087231 2147.037842 2037.033352 2421.63257 2342.294042 1.059319889 0.823981597 0.880669843 0.943492855 1.084910892 1.010158071 0.916638904 0.869674479 1.033872147 1 11.19370648 -6.002620622 24.92989057 0.980483574 0.911671509 0.118009834 0.078627181 219.6713865 2089782.582 0.023051899 0.033507253 9.94E-07 6.002620622 -0.068812064 EGVNQPAAVVMEDS(ph)SPHEALR ddPTM_A459_MK2206_30min_R2 2 EGVNQPAAVVMEDSSPHEALR 21 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 EGVNQPAAVVMEDS(0.856)S(0.144)PHEALR;EGVNQPAAVVMEDS(0.861)S(0.139)PHEALR 195.94 1.19E-16 12356200 42291 44577 42208 50279 52691 51277 52280 39194 39759 48849 TRUE FALSE 45528.83148 42363.371 43615.19365 46171.04487 50622.08659 53228.38217 45415.5732 44316.79037 43217.16595 47255.06113 0.963469952 0.896483255 0.922974018 0.977060314 1.071252166 1.126405953 0.961073208 0.937821036 0.914551054 1 15.52818123 -3.107094661 19.35490112 0.977953967 0.992651003 0 0.068567465 0 0 0.017741274 0 0.000781457 3.107094661 0.014697036 EGVNQPAAVVMEDSS(ph)PHEALR ddPTM_A459_MK2206_30min_R1 1 EGVNQPAAVVMEDSSPHEALR 21 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 EGVNQPAAVVMEDS(0.256)S(0.744)PHEALR 141 1.16E-05 6810400 2225.2 2315.9 2217.3 1637.2 2211.8 2079.3 2291.8 2169.7 1821.9 1649.1 TRUE FALSE 2035.935055 2165.134489 2066.795854 1763.297428 2123.699322 2197.028169 2138.918204 2150.730542 2011.293025 1853.402958 1.098484842 1.168194148 1.115135726 0.951383734 1.145837883 1.185402321 1.154049201 1.160422526 1.085189282 1 10.85596086 -3.639609833 15.23795293 1.113130159 1.130073807 0 0.072935299 0 0 0.017015102 0 0.000229293 3.639609833 0.016943648 EGVQGPLNVS(ph)LSEEGK ddPTM_A459_MK2206_30min_R1 4 EGVQGPLNVSLSEEGK 16 0 P12270 P12270 TPR Nucleoprotein TPR 1 EGVQGPLNVS(0.99)LS(0.01)EEGK;EGVQGPLNVS(0.762)LS(0.238)EEGK;EGVQGPLNVS(0.91)LS(0.09)EEGK;EGVQGPLNVS(0.998)LS(0.002)EEGK 236.27 3.07E-21 69584000 8066.41 7849.93 7921 6433.33 6269.22 5605.35 6679.91 6691.89 8009.7 8576.26 TRUE FALSE 7380.319471 7338.89813 7383.344589 6928.826191 6019.503692 5922.720073 6234.305392 6633.383511 8842.336978 9638.751836 0.765692446 0.76139507 0.766006296 0.718850979 0.624510704 0.614469609 0.646795923 0.688199429 0.917373653 1 13.23463062 -8.365452072 3.438988421 0.994918304 0.695760405 0.790560512 0.05428492 0.117974242 2.457374136 0.06093036 0.016354188 4.31E-09 8.365452072 -0.299157898 EGVQGPLNVS(ph)LSEEGK ddPTM_A459_MK2206_30min_R2 2 EGVQGPLNVSLSEEGK 16 0 P12270 P12270 TPR Nucleoprotein TPR 1 EGVQGPLNVS(1)LSEEGK;EGVQGPLNVS(0.999)LS(0.001)EEGK 133.52 0.0005284 27712000 149704 128396 138425 142280 161372 136444 167968 111560 101854 180892 TRUE FALSE 161165.4533 122020.0413 143040.0204 130655.2689 155035.7245 141636.472 145913.5998 126141.275 110713.0768 174989.5089 0.921000661 0.697299182 0.817420549 0.746646297 0.885971539 0.809399792 0.833841987 0.720850501 0.632684082 1 17.41690891 -7.752024958 24.82495642 0.757575463 0.811210668 0 0.105383906 583.4712737 1538570.695 0.047488508 0.026948435 1.77E-08 7.752024958 0.053635205 EGVTPWAS(ph)FK ddPTM_A459_MK2206_30min_R1 2 EGVTPWASFK 10 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 EGVT(0.001)PWAS(0.999)FK;EGVT(0.007)PWAS(0.993)FK 145.14 0.00091257 118104000 12205.7 16408.8 15147.2 12083.6 10017.8 9785.5 10212.5 11508.6 10670.2 13043 TRUE FALSE 11167.54112 15340.58414 14119.05027 13014.28097 9618.769813 10339.54655 9531.242759 11407.98152 11779.40547 14658.86531 0.761828483 1.046505566 0.963174841 0.887809574 0.656174241 0.705344263 0.650203311 0.778230871 0.803568709 1 13.83948581 -6.088364954 5.608458488 0.746315324 0.934722196 0.282988181 0.114465987 0.238604864 11.81327788 0.032864916 0.043091588 8.16E-07 6.088364954 0.188406873 EGVTPWAS(ph)FK ddPTM_A459_MK2206_30min_R2 2 EGVTPWASFK 10 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 EGVT(0.012)PWAS(0.988)FK;EGVTPWAS(1)FK 115.14 0.0067411 29817000 181531 196651 203087 177663 176947 143098 205140 146397 128814 181667 TRUE FALSE 195429.1529 186885.5973 209857.8192 163147.3646 169999.1717 148543.6947 178204.8716 165531.5906 140018.0089 175739.2207 1.112040626 1.063425663 1.194143336 0.928349198 0.96733769 0.845250674 1.014030169 0.941916039 0.796737395 1 17.42307668 -5.776650229 24.96161628 0.927058208 1.117225437 0.629265666 0.068733649 141.8551697 232789.7177 0.018885139 0.028131084 1.67E-06 5.776650229 0.190167229 EGVTPWAS(ph)FKK ddPTM_A459_MK2206_30min_R1 2 EGVTPWASFKK 11 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 EGVT(0.039)PWAS(0.961)FKK;EGVT(0.001)PWAS(0.999)FKK 75.911 0.026889 502400000 12214.5 15457.6 14230.8 13755.1 11718.2 9663.6 10744.3 11228 9437.4 9031.1 TRUE FALSE 11175.59263 14451.30743 13264.85295 14814.52019 11251.43928 10210.74468 10027.56735 11129.83478 10418.4515 10149.94085 1.101050026 1.423782428 1.30688968 1.459567145 1.108522645 1.00599056 0.987943427 1.096541837 1.026454406 1 13.3091837 -6.437648976 5.211213173 1.029733557 1.327621827 0.698662769 0.093015092 0.121637932 5.519372928 0.028473145 0.032074917 3.65E-07 6.437648976 0.297888271 EGVTPWAS(ph)FKK ddPTM_A459_MK2206_30min_R2 1 EGVTPWASFKK 11 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 EGVT(0.003)PWAS(0.997)FKK 76.01 0.026794 196240000 308590 471740 416500 447030 408510 297910 496330 381650 351250 444750 TRUE FALSE 332215.8877 448314.0776 430385.9021 410506.219 392469.8448 309247.1738 431161.2748 431532.9654 381801.0901 430237.8439 0.772167982 1.042014513 1.000344131 0.954137868 0.912215999 0.718781897 1.002146326 1.003010245 0.887418658 1 18.7147749 -9.431580959 0.678364187 1.002045009 0.923814123 0.049603348 0.099972433 15.56201324 8.514685451 0.216198619 0.038674644 3.70E-10 9.431580959 -0.078230885 EGVVEGAEACPASEEALGR ddPTM_A459_MK2206_30min_R1 1 EGVVEGAEACPASEEALGR 19 0 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 0 115.82 0.016526 0 731.38 799.11 849.87 686.75 960.66 750.97 935.52 810.55 761.56 787.43 FALSE TRUE 669.1722904 747.0877938 792.1831923 739.643604 922.394878 793.4892724 873.1131678 803.4634468 840.7268873 884.9827732 0.7561416 0.844183431 0.895139675 0.835771753 1.042274388 0.896615501 0.986587755 0.907885974 0.949992376 1 9.789505562 -3.279252517 0.467621786 0.961619627 2.06E-08 0.618843635 0.050519078 11.97819099 0.668711708 0.029989336 8.606515997 0.000525712 3.279252517 -0.961619607 EGVVGPELHHK ddPTM_A459_MK2206_30min_R1 1 EGVVGPELHHK 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 94.309 0.012618 2506800 4039.2 4331.1 4303.4 4184.2 4258.2 3833.3 4366.8 4550.1 3840.7 3348.1 FALSE TRUE 3695.644829 4049.144603 4011.297198 4506.467809 4088.586877 4050.338133 4075.49874 4510.318955 4239.954509 3762.887905 0.982129929 1.076073671 1.066015597 1.197608837 1.086555587 1.076390856 1.083077371 1.198632292 1.12678204 1 11.8776246 -4.624726485 1.45431358 1.113282417 0.891696571 0.290943 0.056786723 2.078498629 3.068989733 0.016000146 0.745746286 2.37E-05 4.624726485 -0.221585846 EGYAWAEDKEHCEEYGR ddPTM_A459_MK2206_30min_R1 2 EGYAWAEDKEHCEEYGR 17 1 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog 0 ; 130.47 0.00068393 34196000 9198.5 7921.3 8899.8 8158.1 9892.3 8301.1 8881.8 8024 6834.1 6111.6 FALSE TRUE 8416.119272 7405.62193 8295.706372 8786.438276 9498.268744 8771.101108 8289.311328 7953.847014 7544.529151 6868.751148 1.225276486 1.078161338 1.207745949 1.279190072 1.382823244 1.276957182 1.206814914 1.157975714 1.098384406 1 12.7458321 -8.286913507 1.362899683 1.006184486 1.239381977 0.537538018 0.072145241 0.366273087 1.346439803 0.078105561 0.024325733 5.17E-09 8.286913507 0.233197491 EGYAWAEDKEHCEEYGR ddPTM_A459_MK2206_30min_R2 2 EGYAWAEDKEHCEEYGR 17 1 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog 0 ; 92.952 0.0060552 22059000 84794 115885 105850 103461 101305 104335 98816 77571 87976 97606 FALSE TRUE 91285.89384 110130.3194 109378.9862 95007.90534 97327.25668 108305.5415 85841.3405 87709.79604 95627.99346 94421.12421 0.966795244 1.166373736 1.158416478 1.006214511 1.030778414 1.147047787 0.909132794 0.928921327 1.012781772 1 16.52682204 -7.266526047 24.9870242 0.95678575 1.081302803 0.40910591 0.068453777 425.5632168 2090464.365 0.028483606 0.019864972 5.41E-08 7.266526047 0.124517053 EGYVLQTEVAAS(ph)PSGAWQR ddPTM_A459_MK2206_30min_R1 1 EGYVLQTEVAASPSGAWQR 19 0 A0A494BZV2;H0Y2S9 A0A494BZV2 MPRIP 1 EGYVLQTEVAAS(0.945)PS(0.055)GAWQR 118.66 0.0013266 0 498.3 359.17 447 319.7 242.75 206.71 230.73 309.68 241.22 382.75 TRUE FALSE 455.9169683 335.7879677 416.6588854 344.3233494 233.0807535 218.4137416 215.3384227 306.9725004 266.2956822 430.1679596 1.059858035 0.780597346 0.968595815 0.800439321 0.54183662 0.507740608 0.500591497 0.713610797 0.619050481 1 8.748756262 -6.046176652 4.145117094 0.619719299 0.918356295 0.417897529 0.151147944 0.195730505 7.140924327 0.043356053 0.05965959 8.99E-07 6.046176652 0.298636996 EHAASLCR ddPTM_A459_MK2206_30min_R2 2 EHAASLCR 8 0 H3BPG2;H3BQF2;A0A0B4J287;H3BM91;Q9H0A8-2;Q9H0A8 H3BPG2 COMMD4 COMM domain-containing protein 4 0 ; 141.52 0.0031937 1470460 6032.1 7773.9 8958 8450.6 9043 9635.3 10493.8 8023.2 9702.6 8896.1 FALSE TRUE 6493.922214 7387.85943 9256.655249 7760.158948 8687.926383 10001.97809 9115.951455 9071.859788 10546.51461 8605.820986 0.754596479 0.858472358 1.075627214 0.901733717 1.009540681 1.16223404 1.059277374 1.054153904 1.225509411 1 13.07109711 -3.810785091 0.493385032 1.100832397 4.85E-21 0.635001395 0.080675675 7.113495224 0.641310083 0.047629131 5.578051494 0.000154602 3.810785091 -1.100832397 EHALLAYTLGVK ddPTM_A459_MK2206_30min_R1 2 EHALLAYTLGVK 12 0 P68104;Q5VTE0;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8Y660;A0A2R8Y488 P68104 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 ; 138.75 0.0017066 46013000 25106 27285 27006 27063 25114 24213 25320 26552 19846.1 20718 FALSE TRUE 22970.60286 25508.74154 25172.90796 29147.39695 24113.6562 25583.91914 23630.949 26319.85866 21909.17311 23284.70225 0.986510483 1.095515041 1.081092113 1.251783108 1.035600797 1.098743667 1.014870138 1.130349806 0.940925629 1 14.50709481 -8.265015126 24.97108411 0.970462805 1.088700011 0.306263444 0.069995695 388.4278393 2712504.807 0.05859481 0.017467809 5.43E-09 8.265015126 0.118237206 EHALLAYTLGVK ddPTM_A459_MK2206_30min_R2 2 EHALLAYTLGVK 12 0 P68104;Q5VTE0;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8Y660;A0A2R8Y488 P68104 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 ; 100.93 0.018259 8288400 84849 110178 101293 116070 117437 105299 116480 112120 104078 105461 FALSE TRUE 91345.10468 104706.7207 104670.0581 106586.7097 112825.8333 109306.2272 101186.0361 126774.469 113130.5163 102019.8162 0.895366293 1.026337085 1.025977716 1.044764769 1.105920766 1.071421527 0.991827273 1.242645534 1.108907274 1 16.63848988 -3.267220775 0.554754213 1.097483697 1.06E-14 0.40236554 0.066999241 18.84127765 1.172433252 0.033861205 19.29715129 0.000540479 3.267220775 -1.097483697 EHAPLAS(ph)PVENK ddPTM_A459_MK2206_30min_R1 1 EHAPLASPVENK 12 0 Q9ULJ3 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 EHAPLAS(1)PVENK 100.68 0.0087481 7718800 5737.5 6346.8 6087.7 4346.3 5056 4835 5420.6 5005.6 6630.3 6544.2 TRUE FALSE 5249.495496 5933.622166 5674.483885 4681.052779 4854.608814 5108.753522 5059.001664 4961.836567 7319.543412 7354.944902 0.713736889 0.806752769 0.771519564 0.636449741 0.660046931 0.694601195 0.687836786 0.674625933 0.995186709 1 12.84449882 -8.265554871 24.94100681 0.997593414 0.706463878 0.856108343 0.047866948 137.6156864 833970.9659 0.046157924 0.013607619 5.43E-09 8.265554871 -0.291129537 EHAPLAS(ph)PVENK ddPTM_A459_MK2206_30min_R2 3 EHAPLASPVENK 12 0 Q9ULJ3 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 EHAPLAS(1)PVENK;EHAPLAS(1)PVENK;EHAPLAS(1)PVENK 150.9 0.00053682 6306400 132392 108383 105135 107456 105782 80742 123506 106156 79753 126931 TRUE FALSE 142528.0333 103000.8578 108640.1484 98676.50107 101628.4672 83814.69339 107289.5138 120030.9537 86689.77178 122789.2519 1.160753333 0.838842621 0.884769202 0.803624907 0.827665823 0.68258982 0.873769587 0.977536322 0.70600456 1 16.90582476 -4.761433563 12.60865973 0.838554153 1.161068991 0.494870355 0.095911229 0.046931017 530.9400725 0.023022168 0.128690165 1.73E-05 4.761433563 0.322514839 EHAPSIIFMDEIDSIGSSR ddPTM_A459_MK2206_30min_R1 1 EHAPSIIFMDEIDSIGSSR 19 0 P62195-2;P62195;J3QSA9;J3QQM1 P62195-2 PSMC5 26S protease regulatory subunit 8 0 96.153 0.0084071 0 527.91 643.32 665.67 451.24 450.4 499.83 671.95 532.48 606.29 414.75 FALSE TRUE 483.0084823 601.4397511 620.4861751 485.994583 432.4596143 528.1299427 627.1254415 527.8245835 669.3160151 466.1323612 1.036204569 1.290276756 1.331137305 1.042610691 0.927761405 1.133004242 1.345380612 1.132349151 1.435892615 1 8.864595865 -7.089895237 18.01353277 1.239412414 1.130439321 0.09088685 0.155600339 15.15322926 3030.721885 0.060943451 0.047206776 8.13E-08 7.089895237 -0.108973093 EHASIDAQSGAGVPNPSTS(ph)ASPK ddPTM_A459_MK2206_30min_R2 2 EHASIDAQSGAGVPNPSTSASPK 23 0 Q8IXJ6-5;Q8IXJ6-2;Q8IXJ6-3;Q8IXJ6 Q8IXJ6-5 SIRT2 NAD-dependent protein deacetylase sirtuin-2 1 EHASIDAQSGAGVPNPS(0.017)T(0.079)S(0.688)AS(0.216)PK;EHASIDAQSGAGVPNPS(0.03)T(0.064)S(0.794)AS(0.112)PK 156.31 1.34E-09 35676000 30436 82561 58619 101819 119744 124712 123749 72865 108203 59080 TRUE FALSE 32766.20356 78461.14079 60573.3282 93500.062 115042.2489 129458.0025 107500.6077 82388.70568 117614.3014 57152.22444 0.57331458 1.372844917 1.059859503 1.635982902 2.012909384 2.265143725 1.880952294 1.441566037 2.057912925 1 15.80252203 -5.816168974 3.043891482 1.829977997 1.01689372 0.452351248 0.379978419 0.21986976 4.134219308 0.108369804 0.181477622 1.53E-06 5.816168974 -0.813084278 EHASIDAQSGAGVPNPSTSAS(ph)PK ddPTM_A459_MK2206_30min_R1 3 EHASIDAQSGAGVPNPSTSASPK 23 0 Q8IXJ6-5;Q8IXJ6-2;Q8IXJ6-3;Q8IXJ6 Q8IXJ6-5 SIRT2 NAD-dependent protein deacetylase sirtuin-2 1 EHASIDAQSGAGVPNPS(0.012)T(0.014)S(0.467)AS(0.507)PK;EHASIDAQSGAGVPNPS(0.034)T(0.02)S(0.163)AS(0.783)PK;EHASIDAQSGAGVPNPS(0.056)T(0.056)S(0.155)AS(0.733)PK 141.87 1.28E-06 20281900 9900.7 6357.29 8319.5 6214.14 11643.2 12416.6 11730.9 8796 6981.5 6161.3 TRUE FALSE 9058.593474 5943.429266 7754.795519 6692.75414 11179.42669 13119.61716 10948.35307 8719.097499 7707.251909 6924.608359 1.308174124 0.858305475 1.119889403 0.966517353 1.614448949 1.894636704 1.58107903 1.259146662 1.113023511 1 12.75751676 -6.255120622 24.87955593 1.45609335 1.052632411 0.279406296 0.266932227 588.3806138 2316694.758 0.083731641 0.105384012 5.56E-07 6.255120622 -0.403460939 EHASIDAQSGAGVPNPSTSAS(ph)PK ddPTM_A459_MK2206_30min_R2 1 EHASIDAQSGAGVPNPSTSASPK 23 0 Q8IXJ6-5;Q8IXJ6-2;Q8IXJ6-3;Q8IXJ6 Q8IXJ6-5 SIRT2 NAD-dependent protein deacetylase sirtuin-2 1 EHASIDAQSGAGVPNPS(0.003)T(0.13)S(0.401)AS(0.465)PK 130.26 5.26E-06 4129100 7995.7 14799 10463 22112 22450 24229 24549 16089 19438 11773 TRUE FALSE 8607.85694 14064.10318 10811.8312 20305.37887 21568.5002 25151.05157 21325.68681 18191.88754 21128.6821 11388.84797 0.755814544 1.234901301 0.94933493 1.78291772 1.893826333 2.20839295 1.872506057 1.597342206 1.85520802 1 13.4753342 -5.764677236 24.83802869 1.800110413 1.00550525 0.550197262 0.313602382 51.92932947 398362.275 0.084342233 0.131230652 1.72E-06 5.764677236 -0.794605163 EHCDT(ph)EGEADDFDPGKK ddPTM_A459_MK2206_30min_R2 3 EHCDTEGEADDFDPGKK 17 1 Q9H8M2 Q9H8M2 BRD9 Bromodomain-containing protein 9 1 EHCDT(1)EGEADDFDPGKK;EHCDT(1)EGEADDFDPGKK;EHCDT(1)EGEADDFDPGKK 74.147 0.01306 12187600 127142 112362 116268 127782 128404 90121 130899 101913 85667 136112 TRUE FALSE 136876.0893 106782.2665 120144.3171 117341.8018 123362.2138 93550.61781 113711.8041 115233.379 93118.16081 131670.6766 1.039533576 0.810979857 0.912460695 0.891176417 0.936899673 0.710489383 0.863607654 0.875163567 0.707205 1 17.00657456 EHEQT(ph)DSEIK ddPTM_A459_MK2206_30min_R1 1 EHEQTDSEIK 10 0 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 EHEQT(0.947)DS(0.053)EIK 102.53 0.022308 0 1251.9 1224 1417.1 1087.9 1470.7 1055.8 1131.9 1454.5 1190 1317.5 TRUE FALSE 1145.419331 1144.317378 1320.9112 1171.690246 1412.118905 1115.578484 1056.393016 1441.78346 1313.704758 1480.721847 0.773554691 0.772810491 0.892072473 0.791296657 0.953669258 0.753401786 0.7134311 0.973703105 0.88720563 1 10.53208494 -7.782241954 24.99555911 0.947840846 0.812075372 0.471724335 0.070813186 242.0531704 290837.4374 0.039231964 0.018878 1.65E-08 7.782241954 -0.135765474 EHEVFQR ddPTM_A459_MK2206_30min_R1 3 EHEVFQR 7 0 O60884 O60884 DNAJA2 DnaJ homolog subfamily A member 2 0 ;; 126.28 0.0080854 13301200 6336.1 6557 7087.4 5663.5 6499.3 6811.5 7132.3 6438.8 3954.2 5088 FALSE TRUE 5797.181423 6130.138108 6606.327035 6099.703751 6240.419119 7197.161244 6656.517281 6382.50625 4365.25324 5718.339852 1.013787493 1.072013603 1.155287584 1.066691367 1.091299097 1.258610266 1.16406465 1.116146717 0.76337772 1 12.48138065 -8.240587758 23.6720085 0.881688917 1.120722331 0.567086958 0.082277009 247.3250009 280779.6375 0.055953774 0.021084374 5.75E-09 8.240587758 0.239033413 EHEVFQR ddPTM_A459_MK2206_30min_R2 4 EHEVFQR 7 0 O60884 O60884 DNAJA2 DnaJ homolog subfamily A member 2 0 ;;; 124.59 0.0090058 23054900 69978 98440 72164 99177 93443 90497 93774 68999 74764 91137 FALSE TRUE 75335.56948 93551.61275 74569.91174 91073.92185 89773.95831 93940.92675 81461.36116 78017.40621 81266.83758 88163.20715 0.854501236 1.06111853 0.845816686 1.033015073 1.018270106 1.065534363 0.923983641 0.884920237 0.921777238 1 16.42788909 -10.59010764 5.102424867 1.000000686 0.960572646 0.02418101 0.079177357 6.16E-07 1.12E-07 0.076364034 0.018520676 2.57E-11 10.59010764 -0.03942804 EHFAQFGHVR ddPTM_A459_MK2206_30min_R1 2 EHFAQFGHVR 10 0 H0YJ07;H0YJU7;H0YJW7;A0A087WUN7;H0YJ40;G3V4X6;G3V2S9;Q9GZT3-2;Q9GZT3 H0YJ07 SLIRP "SRA stem-loop-interacting RNA-binding protein, mitochondrial" 0 ; 163.88 0.00021703 14712200 7987.4 7461.6 7517.4 7510.4 8544.5 7539.3 8641.2 7364.6 5615.8 6399.6 FALSE TRUE 7308.029686 6975.848484 7007.139833 8088.852309 8204.154472 7966.168651 8064.761315 7300.212079 6199.582506 7192.430763 1.016072303 0.969887471 0.974238066 1.124634018 1.140665061 1.107576689 1.121284526 1.014985381 0.861959289 1 12.81226371 -8.027209999 8.104379555 0.932879869 1.06492204 0.393910134 0.065937917 0.289369075 74.54413571 0.047502328 0.018873828 9.39E-09 8.027209999 0.132042171 EHFAQFGHVR ddPTM_A459_MK2206_30min_R2 2 EHFAQFGHVR 10 0 H0YJ07;H0YJU7;H0YJW7;A0A087WUN7;H0YJ40;G3V4X6;G3V2S9;Q9GZT3-2;Q9GZT3 H0YJ07 SLIRP "SRA stem-loop-interacting RNA-binding protein, mitochondrial" 0 ; 128.91 0.0017138 3870370 16136.6 18747.7 16822.5 16133.8 16778.4 18599.8 19118 11824.4 20312.6 17846.6 FALSE TRUE 17372.0305 17816.71648 17383.35375 14815.61693 16119.59571 19307.62842 16607.78364 13369.88968 22079.35323 17264.2669 1.006242003 1.031999597 1.006897881 0.858166583 0.933697087 1.11835785 0.961974449 0.774425567 1.278904766 1 14.07550145 EHFQDDVFNEK ddPTM_A459_MK2206_30min_R1 1 EHFQDDVFNEK 11 0 A0A0C4DFS8;P43490 A0A0C4DFS8 NAMPT Nicotinamide phosphoribosyltransferase 0 118.61 0.0073909 4131400 4794.7 5070 5271.5 3964.2 4282.1 4508.6 5367.6 4338.3 4875.1 5202.5 FALSE TRUE 4386.885587 4739.942078 4913.685267 4269.523371 4111.53489 4763.873036 5009.537198 4300.3707 5381.884091 5847.024977 0.750276526 0.81065877 0.840373572 0.730204401 0.703184082 0.814751614 0.856766855 0.735480132 0.920448281 1 12.51348704 -8.4529613 3.896789607 0.998862607 0.783085468 0.700265706 0.048334269 0.115829325 3.369585979 0.048713646 0.012806445 3.52E-09 8.4529613 -0.21577714 EHFQDDVFNEK ddPTM_A459_MK2206_30min_R2 5 EHFQDDVFNEK 11 0 A0A0C4DFS8;P43490 A0A0C4DFS8 NAMPT Nicotinamide phosphoribosyltransferase 0 ;;;; 140.49 0.0064699 39482900 247099.5 261726.8 237963.9 290962 249501 249000.4 275051.3 227673.3 213607.5 294293 FALSE TRUE 266017.6277 248729.8277 245897.4977 267189.4739 239704.3371 258476.2847 238936.7339 257430.982 232186.6942 284690.2435 0.934410763 0.873685816 0.863737003 0.938526978 0.841982971 0.90792112 0.839286696 0.904249401 0.815576577 1 18.11903353 -6.268638006 24.91959384 0.87892538 0.897750321 0.016021102 0.052756887 2439.223105 8443881.588 0.015097587 0.017483914 5.39E-07 6.268638006 0.018824942 EHGAFDAVK ddPTM_A459_MK2206_30min_R1 1 EHGAFDAVK 9 0 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586;A0A494C1T2 V9GZ78 MTHFD1 "C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed" 0 89.886 0.041133 3008500 4393.8 4160.8 4106.4 3853.8 3810.1 3559.1 4360 3998 3597.7 3450.8 FALSE TRUE 4020.084237 3889.931164 3827.669009 4150.620344 3658.335649 3760.613166 4069.152355 3963.045908 3971.693789 3878.311156 1.036555365 1.002996151 0.986942217 1.070213342 0.943280593 0.969652257 1.049207294 1.021848363 1.024078169 1 11.92121284 -7.273780987 24.95107478 1.02560415 1.001470548 0.09001314 0.034347499 1953.911758 3950218.836 0.014587234 0.009925779 5.32E-08 7.273780987 -0.024133602 EHHWVPR ddPTM_A459_MK2206_30min_R1 2 EHHWVPR 7 0 P78344-2;P78344;H0Y3P2;D3DQV9;H0YCH5 P78344-2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 0 ; 95.62 0.03326 3648200 4362.5 3822.5 4603.2 4075.1 4540.2 3687.7 4591.7 4006.2 2250.6 3305.7 FALSE TRUE 3991.446467 3573.654555 4290.747609 4388.964908 4359.35422 3896.494387 4285.396071 3971.174216 2484.557924 3715.235073 1.074345604 0.961891909 1.154906089 1.181342451 1.17337238 1.048788115 1.153465659 1.068889085 0.668748511 1 11.85923778 -8.119137079 6.939487201 0.837104138 1.106594945 0.549518955 0.097431595 0.175637543 9.205564731 0.064895445 0.024205114 7.60E-09 8.119137079 0.269490807 EHHWVPR ddPTM_A459_MK2206_30min_R2 1 EHHWVPR 7 0 P78344-2;P78344;H0Y3P2;D3DQV9;H0YCH5 P78344-2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 0 97.071 0.031947 1120500 6535.3 8850.2 5190 8547.2 10337 8834.7 9192.4 6372 7460.7 8746.1 FALSE TRUE 7035.647593 8410.711937 5363.03201 7848.866419 9931.117441 9170.910699 7985.426838 7204.842278 8109.6182 8460.715473 0.831566505 0.994089916 0.633874526 0.927683533 1.173791681 1.083940327 0.943824061 0.851564185 0.95850265 1 13.04656395 -4.745820873 23.77131484 0.947390336 0.831565907 0.065669156 0.135222587 1666.835876 2536652.285 0.036560947 0.821406038 1.80E-05 4.745820873 -0.115824429 EHIEELLR ddPTM_A459_MK2206_30min_R1 2 EHIEELLR 8 0 H0YMC2;B4DIH5;P61201;P61201-2 H0YMC2 COPS2 COP9 signalosome complex subunit 2 0 ; 154.12 0.0010722 5303800 4844.8 4473.7 4935.9 4495.5 5182.1 5029 5419.3 5385.1 4670.9 5140.5 FALSE TRUE 4432.724319 4182.461317 4600.86486 4841.744189 4975.685984 5313.737634 5057.788385 5338.018638 5156.45677 5777.343949 0.767259896 0.723941893 0.796363329 0.838057113 0.861241087 0.91975442 0.875452185 0.923957217 0.892530688 1 12.49619067 -1.890146682 0.156724916 1.016118541 6.28E-11 0.879511623 0.026932834 18.10443591 0.204641874 0.087177238 4.131398287 0.012878145 1.890146682 -1.016118541 EHIYDLR ddPTM_A459_MK2206_30min_R1 4 EHIYDLR 7 0 Q14677-2;Q14677;Q14677-3 Q14677-2 CLINT1 Clathrin interactor 1 0 ;;; 129.68 0.0064026 16779300 14821.3 16088.4 15001.3 13970.4 16815.9 14957.1 15671.3 13764.4 13269 12448 FALSE TRUE 13560.67061 15041.04224 13983.05355 15046.40263 16146.08709 15803.95808 14625.89617 13644.0593 14648.36003 13990.15222 0.969301148 1.075116411 0.999492596 1.075499565 1.154103747 1.129648758 1.045442247 0.975261676 1.047047938 1 13.77212404 -7.530309299 22.56731241 1.008763196 1.070366246 0.199096438 0.053364216 94.78060614 287840.5529 0.026776607 0.015518283 2.95E-08 7.530309299 0.06160305 EHIYDLR ddPTM_A459_MK2206_30min_R2 4 EHIYDLR 7 0 Q14677-2;Q14677;Q14677-3 Q14677-2 CLINT1 Clathrin interactor 1 0 ;;; 129.68 0.0064026 16186400 110013 133079 111563 133423 133505 123624 132860 110513 113178 119623 FALSE TRUE 118435.6799 126470.4904 115282.4547 122521.9141 128262.9229 128328.5979 115415.3224 124957.4285 123022.0179 115719.7113 1.023470233 1.092903611 0.996221417 1.058781712 1.108393042 1.108960578 0.997369602 1.079828381 1.063103394 1 16.8202751 -4.388914289 10.95730552 1.058317328 5.26E-05 0.049400811 0.042102052 116056.3291 171448.54 0.010371094 2942564.117 4.08E-05 4.388914289 -1.058264712 EHLELFWSR ddPTM_A459_MK2206_30min_R1 2 EHLELFWSR 9 0 A0A087WVQ6;Q00610-2;Q00610;J3KS13 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ; 145.46 0.0025982 33989000 10371.2 9643.3 10579.3 8053.6 11126.6 9637.3 11773.5 8702.9 9761 10280.6 FALSE TRUE 9489.074979 9015.519417 9861.206592 8673.889667 10683.40396 10182.9556 10988.1113 8626.811463 10775.69088 11554.23834 0.821263566 0.780278124 0.853470934 0.750710641 0.924630741 0.881317772 0.951002651 0.746636101 0.93261802 1 13.49613454 -6.27031811 24.97321908 0.89437862 0.80363706 0.361651896 0.066991788 793.1713665 2230949.892 0.019949474 0.022943584 5.37E-07 6.27031811 -0.09074156 EHMQPTHPIR ddPTM_A459_MK2206_30min_R1 4 EHMQPTHPIR 10 0 P61981 P61981 YWHAG "14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed" 0 ;;; 112.3 0.0044981 30642480 6114.34 6197.24 6716.52 5637.56 8325.56 6017.15 9006.25 8167.09 5753.85 6752.11 FALSE TRUE 5594.283275 5793.79855 6260.621336 6071.765848 7993.935316 6357.835833 8405.459495 8095.685993 6351.983298 7588.612363 0.737194497 0.763485901 0.825002126 0.800115431 1.053411999 0.837812703 1.107641173 1.066820336 0.837041477 1 12.88962039 -6.192622613 6.42994267 0.985819592 0.78145538 0.568402378 0.086402754 0.181390126 13.79257064 0.025531569 0.033024279 6.42E-07 6.192622613 -0.204364212 EHMQPTHPIR ddPTM_A459_MK2206_30min_R2 4 EHMQPTHPIR 10 0 P61981 P61981 YWHAG "14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed" 0 ;;; 116.23 0.0036093 16003200 26572.4 38144.2 38957 41050.7 36018 40556.7 34119.3 31881.4 39032.1 36257.4 FALSE TRUE 28606.80337 36250.01449 40255.80694 37696.7265 34603.75234 42100.11364 29639.39493 36048.40845 42427.0415 35074.32401 0.815605266 1.033519976 1.147728661 1.074767014 0.986583586 1.200311477 0.845045365 1.027772009 1.209632479 1 15.09812768 -4.769637995 4.707788209 1.059440739 0.799113901 0.335449452 0.103098041 0.2119328 11.13097941 0.025319502 0.183016917 1.70E-05 4.769637995 -0.260326839 EHNSMWASLS(ph)SPDAEAVEPDFSSIER ddPTM_A459_MK2206_30min_R1 2 EHNSMWASLSSPDAEAVEPDFSSIER 26 0 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2 INF2 Inverted formin-2 1 EHNSMWASLS(0.605)S(0.394)PDAEAVEPDFSSIER;EHNSMWAS(0.047)LS(0.556)S(0.396)PDAEAVEPDFSSIER 107.03 2.03E-08 8333200 1961.13 1872.64 2292.4 2030.34 2144.23 1814.14 1903.19 1907.52 1705.7 1476.35 TRUE FALSE 1794.325595 1750.730796 2136.798275 2186.717139 2058.820779 1916.855039 1776.231668 1890.842754 1883.013619 1659.251384 1.081406719 1.055132943 1.287808644 1.317893816 1.240813055 1.15525294 1.070501845 1.139575818 1.134857344 1 10.69631676 -7.025679514 5.136545489 1.098961597 1.200651606 0.268136787 0.084813888 0.320267087 23.41160791 0.035869543 0.028878129 9.43E-08 7.025679514 0.101690009 EHNSMWASLSS(ph)PDAEAVEPDFSSIER ddPTM_A459_MK2206_30min_R1 3 EHNSMWASLSSPDAEAVEPDFSSIER 26 0 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2 INF2 Inverted formin-2 1 EHNSMWASLS(0.069)S(0.931)PDAEAVEPDFSSIER;EHNSMWASLS(0.255)S(0.744)PDAEAVEPDFSSIER;EHNSMWASLS(0.023)S(0.977)PDAEAVEPDFSSIER 149.76 4.08E-11 39294700 2832.82 2065.39 1894.3 2237.65 4272.12 4124.05 3011.74 2403.99 1961.63 1791.87 TRUE FALSE 2591.873783 1930.932736 1765.720194 2409.994191 4101.952414 4357.550147 2810.83232 2382.972169 2165.548458 2013.860384 1.287017613 0.958821551 0.876783817 1.196703709 2.036860374 2.163779666 1.395743391 1.183285688 1.075322041 1 10.97574795 -6.012431561 24.3418442 1.52460667 1.033348075 0.216514876 0.370882107 623.0272055 1219934.735 0.117845333 0.160573536 9.72E-07 6.012431561 -0.491258595 EHPDAWTR ddPTM_A459_MK2206_30min_R1 4 EHPDAWTR 8 0 O14980;C9IYM2;H7BZC5;F8WF71;C9IZS4;C9JQ02;C9JV99;C9J673;C9JKM9 O14980 XPO1 Exportin-1 0 ;;; 131.22 0.0050899 17190000 10635.7 9771.3 10648.4 9171.6 12340.4 11157.5 11533.2 10441.9 9139.5 9050.6 FALSE TRUE 9731.077865 9135.186594 9925.616276 9877.998221 11848.85574 11789.22801 10763.84127 10350.60757 10089.58373 10171.85666 0.95666683 0.89808448 0.975791993 0.971110639 1.164866566 1.159004536 1.058198285 1.017573086 0.99191171 1 13.31229542 -6.070994156 7.746445684 1.070602516 0.944483271 0.48421025 0.058423778 0.270277365 26.65317067 0.019018981 0.024693511 8.49E-07 6.070994156 -0.126119246 EHQTSAYS(ph)PPR ddPTM_A459_MK2206_30min_R1 1 EHQTSAYSPPR 11 0 H3BRF9;Q96K21-3;Q96K21-2;Q96K21;Q96K21-4 H3BRF9 ZFYVE19 Abscission/NoCut checkpoint regulator 1 EHQT(0.001)S(0.002)AYS(0.997)PPR 139.74 0.0011433 12270000 1406.3 844.56 1131.5 912.2 1547.2 1576 1836.1 1341 890.96 1024.1 TRUE FALSE 1286.6868 789.5789905 1054.696933 982.4578021 1485.571748 1665.231758 1713.617119 1329.275778 983.5784803 1150.97324 1.117912004 0.68600986 0.916352263 0.853588744 1.290709199 1.446803193 1.488841843 1.154914582 0.854562423 1 10.16863858 -6.259048087 24.38861005 1.239902675 0.880282174 0.352348409 0.20416819 158.9764848 1621385.226 0.064236038 0.078977263 5.51E-07 6.259048087 -0.3596205 EHS(ph)NPSPSQDTDGTK ddPTM_A459_MK2206_30min_R2 1 EHSNPSPSQDTDGTK 15 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 EHS(0.638)NPS(0.356)PS(0.006)QDTDGTK 65.219 0.044095 4649000 21745 21274 18618 21584 26518 25322 27672 22895 24446 22485 TRUE FALSE 23409.81392 20217.5641 19238.71483 19820.51816 25476.77008 26285.64645 24038.63316 25887.45511 26572.26889 21751.31629 1.07624815 0.929486925 0.884485084 0.911233044 1.171274866 1.208462334 1.10515763 1.190155794 1.22163958 1 14.40881509 -6.264894966 24.98225637 1.159692326 0.94416654 0.619024415 0.076198009 182.4904332 1319317.635 0.022914691 0.027046129 5.43E-07 6.264894966 -0.215525786 EHSDYVR ddPTM_A459_MK2206_30min_R2 2 EHSDYVR 7 0 H0Y8P4;Q8TED0-3;Q8TED0 H0Y8P4 UTP15 U3 small nucleolar RNA-associated protein 15 homolog 0 ; 152.63 0.0028511 2774000 1034.29 1491.4 1912.82 1857.39 1866.95 2881.42 1922.53 3663.1 4329.7 2024.68 FALSE TRUE 1113.476038 1417.339245 1976.592464 1705.635296 1793.644162 2991.074457 1670.099502 4141.879747 4706.28948 1958.614857 0.568501782 0.723643671 1.009178735 0.870837515 0.915771753 1.527137633 0.852694186 2.114698422 2.40286622 1 10.93561802 -7.249922729 1.093068337 1.863807368 0.806323636 0.443434461 0.435163855 0.447413542 1.042430185 0.299662476 0.171913196 5.62E-08 7.249922729 -1.057483732 EHSLQVS(ph)PSLEK ddPTM_A459_MK2206_30min_R1 2 EHSLQVSPSLEK 12 0 O95235-2;O95235 O95235-2 KIF20A Kinesin-like protein KIF20A 1 EHSLQVS(0.774)PS(0.226)LEK;EHSLQVS(0.772)PS(0.228)LEK 183.28 0.0001043 27420000 6655 6733.4 6600.9 5939.6 5337.8 4736.2 6593.9 5612.2 5947.6 5576.7 TRUE FALSE 6088.957303 6295.054436 6152.849299 6397.069021 5125.184123 5004.359551 6154.032962 5563.133127 6565.874304 6267.583698 0.971499959 1.004382987 0.981693998 1.020659528 0.817728868 0.798451172 0.981882853 0.887604122 1.0475926 1 12.61369364 -6.216962213 24.9954611 0.91338572 0.994341899 0.181063712 0.073963121 737.9670118 414725.3927 0.022331382 0.028829495 6.07E-07 6.216962213 0.080956179 EHSLQVS(ph)PSLEK ddPTM_A459_MK2206_30min_R2 4 EHSLQVSPSLEK 12 0 O95235-2;O95235 O95235-2 KIF20A Kinesin-like protein KIF20A 1 EHSLQVS(0.968)PS(0.032)LEK;EHSLQVS(0.991)PS(0.009)LEK;EHSLQVS(0.806)PS(0.194)LEK;EHSLQVS(0.972)PS(0.028)LEK 101.42 0.0082991 61684000 427460 423082 401302 461804 441350 375972 492190 360329 346900 449651 TRUE FALSE 460186.6663 402072.3631 414681.2084 424073.136 424020.3814 390279.8779 427564.8618 407425.2375 377072.7349 434978.9247 1.057951639 0.924349067 0.953336322 0.974928007 0.974806726 0.897238592 0.982955351 0.936655121 0.866875873 1 18.73058598 -4.754856838 24.99909044 0.945417351 1.057951828 0.427408805 0.038982433 215.4501265 818158.4012 0.009433006 0.088169941 1.76E-05 4.754856838 0.112534477 EHSNPS(ph)PSQDTDGTK ddPTM_A459_MK2206_30min_R1 3 EHSNPSPSQDTDGTK 15 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 EHSNPS(0.731)PS(0.269)QDTDGTK;EHSNPS(0.729)PS(0.27)QDT(0.001)DGTK;EHSNPS(0.772)PS(0.226)QDT(0.002)DGTK 317.03 3.65E-96 69627900 6579 6837.4 6985.1 6239.6 6997.3 5315.3 6761.3 7489.1 5837.1 6833 TRUE FALSE 6019.421502 6392.284017 6510.970874 6720.175073 6718.582724 5616.247693 6310.266014 7423.623588 6443.887433 7679.523627 0.783827461 0.832380279 0.847835255 0.875077075 0.874869725 0.731327614 0.821700189 0.966677616 0.83909989 1 12.90680111 -8.707407924 0.706702927 0.998155785 0.827734 0.440727952 0.056226745 0.940496587 0.996376964 0.058929561 0.022169073 1.96E-09 8.707407924 -0.170421785 EHSNPS(ph)PSQDTDGTK ddPTM_A459_MK2206_30min_R2 3 EHSNPSPSQDTDGTK 15 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 EHSNPS(0.963)PS(0.036)QDTDGTK;EHS(0.13)NPS(0.868)PS(0.002)QDTDGTK;EHSNPS(0.832)PS(0.078)QDT(0.071)DGT(0.019)K 247.02 9.26E-79 14841000 164772 209498 186032 215933 231180 187951 270658 190299 179747 245559 TRUE FALSE 177387.071 199094.634 192234.214 198290.5832 222102.7116 195103.607 235120.2795 215171.7327 195381.0692 237546.4299 0.746746946 0.838129346 0.809249013 0.834744531 0.934986527 0.821328306 0.989786626 0.905809162 0.82249634 1 17.85785 -1.522878745 0.164937001 0.978603772 0.146883319 0.50506489 0.055626529 53.31769761 0.564650061 0.152992354 10.8533651 0.03 1.522878745 -0.831720453 EHSNPSPS(ph)QDTDGTK ddPTM_A459_MK2206_30min_R1 1 EHSNPSPSQDTDGTK 15 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 EHSNPS(0.234)PS(0.71)QDT(0.053)DGT(0.003)K 137.32 0.00040211 3442300 1466.7 1346.6 1484.1 1381.8 1588.1 1428.5 1507.2 1436.9 1591.6 1460.3 TRUE FALSE 1341.949463 1258.936095 1383.363427 1488.226475 1524.842614 1509.380436 1406.657438 1424.337335 1757.052516 1641.212989 0.817657106 0.76707661 0.84289086 0.906784485 0.929094898 0.919673708 0.857084027 0.867856485 1.070581654 1 10.68054676 -1.522878746 0.145852972 1.03439134 0.117831658 0.576028901 0.054833453 55.43301122 0.535520278 0.219552371 10.67868731 0.03 1.522878746 -0.916559682 EHSPS(ph)ESEKEVVGADPR ddPTM_A459_MK2206_30min_R2 2 EHSPSESEKEVVGADPR 17 1 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 EHS(0.115)PS(0.878)ES(0.007)EKEVVGADPR;EHS(0.266)PS(0.721)ES(0.013)EKEVVGADPR 70.26 0.017816 41265000 167208 226230 179781 214923 218926 166825 227670 189455 145638 213287 TRUE FALSE 180009.573 214995.7472 185774.8088 197363.1034 210329.8652 173173.6423 197776.6555 214217.419 158305.33 206327.4627 0.872446017 1.042012267 0.900388181 0.956552758 1.019398303 0.839314554 0.958557106 1.038239972 0.767252832 1 17.65457633 -6.726043492 24.99996673 0.925430189 0.959519124 0.044213695 0.085614099 735.1715081 519246.4972 0.027018067 0.027017132 1.88E-07 6.726043492 0.034088935 EHSPYGPS(ph)PLGWPSSETR ddPTM_A459_MK2206_30min_R1 2 EHSPYGPSPLGWPSSETR 18 0 G3V599;Q96PC5-6;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-14;Q96PC5-7;Q96PC5-12;Q96PC5 G3V599 MIA2 Melanoma inhibitory activity protein 2 1 EHSPYGPS(0.999)PLGWPS(0.001)SETR;EHSPYGPS(0.997)PLGWPS(0.001)S(0.001)ETR 113.71 0.00075797 8407300 1787.18 1986.93 1641.53 1682.16 2936.5 2308.63 2127.4 2372.7 1841.91 1929.5 TRUE FALSE 1635.170956 1857.580496 1530.107517 1811.720255 2819.532987 2439.342636 1985.485028 2351.955734 2033.383136 2168.541027 0.754041974 0.856603805 0.705593068 0.835455835 1.300198129 1.124877328 0.915585642 1.084579773 0.937673353 1 11.08250902 -6.025346268 23.71639452 1.061338215 0.778864072 0.613862322 0.106751523 262.3894019 245516.6052 0.03219727 0.04178004 9.43E-07 6.025346268 -0.282474143 EHSPYGPS(ph)PLGWPSSETR ddPTM_A459_MK2206_30min_R2 2 EHSPYGPSPLGWPSSETR 18 0 G3V599;Q96PC5-6;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-14;Q96PC5-7;Q96PC5-12;Q96PC5 G3V599 MIA2 Melanoma inhibitory activity protein 2 1 EHSPYGPS(1)PLGWPSSETR;EHSPYGPS(1)PLGWPSSETR 131.56 0.00034851 6792100 55006 41176.3 39523.1 57325 44030.4 73458 85011 44967.8 54309 55803 TRUE FALSE 59217.30165 39131.54482 40840.78043 52641.36413 42301.54526 76253.49566 73848.95358 50845.24586 59032.69865 53982.15268 1.096979255 0.72489782 0.756560796 0.975162373 0.783620941 1.412568634 1.368025355 0.941889927 1.093559551 1 15.72019489 -6.741157853 24.99997874 1.172377922 0.859349085 0.429679982 0.170082055 234.5007236 289056.2069 0.058145545 0.058077794 1.81E-07 6.741157853 -0.313028837 EHTALLK ddPTM_A459_MK2206_30min_R2 1 EHTALLK 7 0 F8WBS5;F8WB72;C9K025;P18077 F8WBS5 RPL35A 60S ribosomal protein L35a 0 117.93 0.015787 1850700 26707 33438 28719 31930 30139 31961 32671 25393 24176 32105 FALSE TRUE 28751.70845 31777.51754 29676.47713 29321.21686 28955.59142 33177.29825 28381.25846 28711.95229 26278.78478 31057.41648 0.925759825 1.023186123 0.955535923 0.944097101 0.932324536 1.068256861 0.913831918 0.924479739 0.846135569 1 14.9226502 EHVEEISELFYDAK ddPTM_A459_MK2206_30min_R1 1 EHVEEISELFYDAK 14 0 Q9Y265;H7C4G5 Q9Y265 RUVBL1 RuvB-like 1 0 141.73 0.00077548 2989700 1591.2 1398.4 1710.8 1260.2 1318.5 1316.5 1559.2 1056.5 1529.5 1568.7 FALSE TRUE 1455.860084 1307.363906 1594.675663 1357.260822 1265.981353 1391.039092 1455.188613 1047.263132 1688.496998 1763.042399 0.825765781 0.741538551 0.904502163 0.769840149 0.718066312 0.788999228 0.825384922 0.594009045 0.957717749 1 10.78385145 -8.471602662 12.39176357 0.999998943 0.775101855 0.541222975 0.076964117 0.919870303 221.3397371 0.071813113 0.018543494 3.38E-09 8.471602662 -0.224897088 EHVIEALR ddPTM_A459_MK2206_30min_R1 2 EHVIEALR 8 0 X1WI28;P27635;F8W7C6;A0A087WV22;H7C123;H7C2C5 X1WI28 RPL10 60S ribosomal protein L10 0 ; 145.16 0.0028552 19618300 16226.2 15823 15614.1 12308.4 15457.7 15451.5 18177.5 14265.3 16100.5 17684.3 FALSE TRUE 14846.07648 14792.91982 14554.2584 13256.3951 14841.98708 16326.35058 16964.91214 14140.57999 17774.20459 19875.16459 0.746966216 0.744291689 0.732283666 0.666982909 0.746760461 0.821444799 0.853573416 0.711469831 0.894292196 1 14.27867919 -8.988704669 0.355507898 1.035373117 0.716465159 0.710195814 0.051189019 1.510826159 0.38889588 0.147550962 0.050434895 1.03E-09 8.988704669 -0.318907957 EHVIEALR ddPTM_A459_MK2206_30min_R2 4 EHVIEALR 8 0 X1WI28;P27635;F8W7C6;A0A087WV22;H7C123;H7C2C5 X1WI28 RPL10 60S ribosomal protein L10 0 ;;; 145.16 0.0028552 37881000 270361 291719 243043 295749 275794 269906 303075 250154 209207 289416 FALSE TRUE 291060.046 277232.6587 251145.9323 271585.3606 264964.9418 280177.462 263280.8884 282849.9867 227403.4467 279972.3796 1.039602715 0.990214317 0.897038246 0.970043406 0.94639672 1.000732509 0.94038165 1.010278182 0.812235289 1 18.09492498 -8.218843331 24.99999171 0.906116888 0.970962332 0.18619505 0.056697631 682.6003447 400625.1905 0.036062797 0.013630212 6.04E-09 8.218843331 0.064845444 EHVIEALRR ddPTM_A459_MK2206_30min_R1 2 EHVIEALRR 9 1 X1WI28;P27635;F8W7C6;A0A087WV22;H7C123;H7C2C5 X1WI28 RPL10 60S ribosomal protein L10 0 ; 164.68 0.0011925 20526600 6945.7 7522.4 8063.2 7020.6 7966 6316.3 8685.9 8599.1 6188.2 5451.3 FALSE TRUE 6354.931742 7032.690393 7515.892449 7561.327828 7648.697352 6673.923448 8106.479459 8523.918975 6831.485535 6126.648199 1.037260756 1.147885461 1.22675437 1.234170395 1.24843097 1.089327024 1.323150799 1.391285855 1.115044526 1 12.5808823 -4.85751002 2.207851818 1.220484238 1.006269827 0.16535875 0.108546283 0.829655159 5.431606693 0.028191034 0.333574667 1.39E-05 4.85751002 -0.214214411 EHYPVS(ph)SPSS(ph)PSPPAQPGGVSR ddPTM_A459_MK2206_30min_R2 1 EHYPVSSPSSPSPPAQPGGVSR 22 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 2 EHY(0.006)PVS(0.746)S(0.247)PS(0.236)S(0.715)PS(0.048)PPAQPGGVSR 87.485 0.0021412 7164800 24028 32232 27012 32978 26382 30270 33832 25086 22688 29600 TRUE FALSE 25867.60215 30631.40575 27912.5666 30283.59191 25346.11012 31421.94606 29389.81776 28364.82633 24661.36123 28634.15442 0.903382784 1.069750665 0.974799751 1.057603848 0.885170547 1.097358965 1.026390279 0.990594166 0.861256836 1 14.80544938 -8.027279453 22.91576047 0.929060682 1.005179963 0.133462508 0.071541678 460.5417971 386866.0389 0.044629446 0.017006073 9.39E-09 8.027279453 0.076119281 EHYPVSSPSS(ph)PSPPAQPGGVSR ddPTM_A459_MK2206_30min_R1 1 EHYPVSSPSSPSPPAQPGGVSR 22 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 EHYPVSSPS(0.055)S(0.943)PS(0.001)PPAQPGGVSR 165.65 8.32E-12 19938000 2066.7 2121.7 2030.4 1506.4 2245.6 2261.8 1977.1 1882.9 1747.4 1574.3 TRUE FALSE 1890.916312 1983.576944 1892.582105 1622.423189 2156.152997 2389.861161 1845.211266 1866.438004 1929.048483 1769.336169 1.068715118 1.121085398 1.069656597 0.916967175 1.218622574 1.350710624 1.04288337 1.054880376 1.0902668 1 10.78899247 -8.499260225 1.21405441 1.005994747 1.112939795 0.081631307 0.108305188 1.445152493 4.672293606 0.111623071 0.034881952 3.17E-09 8.499260225 0.106945048 EHYPVSSPSS(ph)PSPPAQPGGVSR ddPTM_A459_MK2206_30min_R2 4 EHYPVSSPSSPSPPAQPGGVSR 22 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 EHYPVSSPS(0.06)S(0.938)PS(0.002)PPAQPGGVSR;EHYPVSS(0.001)PS(0.067)S(0.93)PS(0.003)PPAQPGGVSR;EHYPVSSPS(0.011)S(0.988)PS(0.001)PPAQPGGVSR;EHYPVSSPS(0.057)S(0.941)PS(0.002)PPAQPGGVSR 179.66 2.11E-16 79199000 101689 141428 93642 125826 133554 140017 133459 107699 114083 126964 TRUE FALSE 109474.388 134404.8912 96763.97754 115545.6133 128309.9989 145345.445 115935.673 121775.6291 124005.7331 122821.1751 0.891331547 1.094313673 0.787844421 0.940762969 1.044689556 1.183390771 0.943938803 0.99148725 1.009644575 1 16.90619979 -6.23052157 7.260217506 1.031925517 0.929977833 0.225444105 0.090991453 0.366077048 70.01270774 0.027560494 0.035115408 5.88E-07 6.23052157 -0.101947685 EHYVDLK ddPTM_A459_MK2206_30min_R1 4 EHYVDLK 7 0 Q32Q12;P22392-2;J3KPD9;E7ERL0;E5RHP0;P15531;P15531-2 Q32Q12;P15531 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ;;; 125.81 0.0083147 92596900 37305.2 40034.9 40528.8 34185 36825.8 33747.8 39836.3 36204.7 36714.5 36504.6 FALSE TRUE 34132.19684 37428.62073 37777.81798 36817.93462 35358.95041 35658.57127 37178.89311 35888.16612 40531.10366 41027.06544 0.831943413 0.912290955 0.920802343 0.897405998 0.861844493 0.869147498 0.906204056 0.874743678 0.987911351 1 15.32428835 -8.274393973 11.26224327 0.994057908 0.886358714 0.748860826 0.0253789 0.330736068 278.7265603 0.022643224 0.00646475 5.32E-09 8.274393973 -0.107699194 EHYVDLK ddPTM_A459_MK2206_30min_R2 4 EHYVDLK 7 0 Q32Q12;P22392-2;J3KPD9;E7ERL0;E5RHP0;P15531;P15531-2 Q32Q12;P15531 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ;;; 120.46 0.013218 88500000 1035090 1191820 1148510 1146860 1126960 1021560 1206540 988400 940490 1134610 FALSE TRUE 1114337.286 1132635.952 1186800.75 1053157.869 1082709.888 1060436.182 1048119.849 1117587.274 1022292.12 1097587.769 1.015260299 1.03193201 1.081280955 0.959520413 0.986444928 0.966151603 0.954930329 1.018221326 0.931398973 1 20.06590488 -5.77494664 24.98929524 0.973989614 1.041735185 0.568243111 0.027562706 154.1904294 285262.0502 0.007414961 0.011066361 1.68E-06 5.77494664 0.067745571 EIAATCSGTEWGQSSGAAS(ph)PGLFQAGHR ddPTM_A459_MK2206_30min_R1 4 EIAATCSGTEWGQSSGAASPGLFQAGHR 28 0 G3V3Z8;P49757-3;P49757 G3V3Z8 NUMB Protein numb homolog 1 EIAATCSGTEWGQS(0.045)S(0.004)GAAS(0.95)PGLFQAGHR;EIAATCSGTEWGQS(0.037)S(0.005)GAAS(0.958)PGLFQAGHR;EIAATCSGTEWGQS(0.016)S(0.002)GAAS(0.982)PGLFQAGHR;EIAATCSGTEWGQS(0.282)S(0.024)GAAS(0.694)PGLFQAGHR 155.37 2.64E-17 71701000 8961 9481.3 9412.7 8255.9 10425.9 10448.8 12186.2 9781.5 10507.8 10716.5 TRUE FALSE 8198.819894 8864.065647 8773.792149 8891.770848 10010.61433 11040.40203 11373.28083 9695.981377 11600.12341 12044.14093 0.680730983 0.735964956 0.728469735 0.738265261 0.831160511 0.916661644 0.94429988 0.805037191 0.963134148 1 13.55604387 -6.42903931 1.955678703 0.916319071 0.71693054 0.792284873 0.0493988 0.155613285 1.181390384 0.017487171 0.020242742 3.72E-07 6.42903931 -0.199388531 EIAATCSGTEWGQSSGAAS(ph)PGLFQAGHR ddPTM_A459_MK2206_30min_R2 2 EIAATCSGTEWGQSSGAASPGLFQAGHR 28 0 G3V3Z8;P49757-3;P49757 G3V3Z8 NUMB Protein numb homolog 1 EIAATCSGTEWGQS(0.008)S(0.013)GAAS(0.979)PGLFQAGHR;EIAATCSGTEWGQS(0.047)S(0.012)GAAS(0.941)PGLFQAGHR 135.2 1.58E-12 35756000 51249 66003 58845 77071 54271 74880 74609 51749 59619 63498 TRUE FALSE 55172.66284 62725.387 60806.86293 70774.05276 52140.04785 77729.61087 64812.74868 58512.77198 64804.55285 61426.06546 0.898196269 1.021152609 0.989919548 1.152182746 0.848826104 1.265417381 1.055134302 0.952572357 1.055000876 1 15.90656336 -3.868731307 1.201170224 1.045352087 1.41E-05 0.13739223 0.105897043 22.90969876 5.353422383 0.030438131 50.21994152 0.000135291 3.868731307 -1.045337941 EIADGLCLEVEGK ddPTM_A459_MK2206_30min_R1 1 EIADGLCLEVEGK 13 0 Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;E9PJF7 Q5W0H4 TPT1 Translationally-controlled tumor protein 0 161.99 0.0050346 2846500 1453.6 1297.2 1294.9 1150.8 1311.4 1267.2 1478.4 1373.7 1201.6 1246 FALSE TRUE 1329.963687 1212.752044 1207.005796 1239.434815 1259.164161 1338.947769 1379.778633 1361.689886 1326.51062 1400.363887 0.94972721 0.866026363 0.861922967 0.885080533 0.899169261 0.956142744 0.985300068 0.972382892 0.947261374 1 10.45158605 -6.784942838 2.991409996 0.973857796 0.887166699 0.712573344 0.025581165 0.139743563 2.570219614 0.009511148 0.008720458 1.64E-07 6.784942838 -0.086691097 EIAIVHS(ph)DAEK ddPTM_A459_MK2206_30min_R2 2 EIAIVHSDAEK 11 0 Q9H307 Q9H307 PNN Pinin 1 EIAIVHS(1)DAEK;EIAIVHS(1)DAEK 82.102 0.026873 12214700 181607 60462 93740 70757 54825 47040 94208 73865 47899 130577 TRUE FALSE 195510.9716 57459.545 96865.24481 64975.92676 52672.29503 48830.14016 81838.37644 83519.40912 52065.16844 126316.2832 1.547789142 0.454886287 0.766846858 0.514390743 0.416987372 0.386570432 0.647884615 0.661192738 0.412180972 1 16.9466811 -3.069880891 9.925860803 0.646526301 0.827148236 0 0.343697681 0 0 0.075328094 0 0.000851372 3.069880891 0.180621935 EIDCLS(ph)PEAQK ddPTM_A459_MK2206_30min_R1 3 EIDCLSPEAQK 11 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3;C9JTC6 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 EIDCLS(1)PEAQK;EIDCLS(1)PEAQK;EIDCLS(1)PEAQK 173.59 0.00018083 93529000 18264.8 16460.5 16510 16456.6 14545.1 12621.4 15074.3 15126.1 13769.1 13349.2 TRUE FALSE 16711.28285 15388.91846 15389.3472 17724.09018 13965.73787 13336.01276 14068.72095 14993.8541 15200.44722 15002.99968 1.113862775 1.025722775 1.025751352 1.181369764 0.930863039 0.888889759 0.937727205 0.999390417 1.013160538 1 13.87296336 -6.287747134 24.99065914 0.956805004 1.077971026 0.553110232 0.05471837 610.5449436 579976.4333 0.017831031 0.020224991 5.16E-07 6.287747134 0.121166022 EIDCLS(ph)PEAQK ddPTM_A459_MK2206_30min_R2 5 EIDCLSPEAQK 11 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3;C9JTC6 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 EIDCLS(1)PEAQK;EIDCLS(1)PEAQK;EIDCLS(1)PEAQK;EIDCLS(1)PEAQK;EIDCLS(1)PEAQK 187.63 1.93E-05 133229300 306643 311473 280914 316969 310711 243470 359817 247279 236539 301888 TRUE FALSE 330119.8238 296005.7037 290279.5326 291071.6188 298510.9249 252735.4215 312572.5957 279599.2143 257112.7347 292037.4193 1.130402483 1.013588274 0.993980611 0.996692888 1.022166699 0.865421363 1.070316936 0.957408866 0.880410241 1 18.15579371 -1.522878747 0.727498222 0.966145126 24.93471413 0.40879653 0.057751834 336.1617724 1.594674393 0.021613414 13163.50029 0.03 1.522878747 23.96856901 EIDDTYIEDAADVDAR ddPTM_A459_MK2206_30min_R2 1 EIDDTYIEDAADVDAR 16 0 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 0 144.28 0.0073062 0 2929.7 3867.5 3388.3 2841.4 3707.9 2783.2 3639.7 2746.3 3180.3 2530.7 FALSE TRUE 3154.000085 3675.445574 3501.264231 2609.248531 3562.309215 2889.116626 3161.803018 3105.250839 3456.916745 2448.123466 1.28833375 1.501331785 1.430182864 1.065815743 1.455118283 1.180135179 1.291521062 1.268420847 1.412067975 1 11.2574606 -13.37170041 0.258999367 4.44E-25 1.347249858 0.352674611 0.128067901 115.0996924 1.952555169 61.57212203 0.173194598 4.25E-14 13.37170041 1.347249858 EIDTDSTS(ph)QGESK ddPTM_A459_MK2206_30min_R2 2 EIDTDSTSQGESK 13 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 EIDTDS(0.032)T(0.032)S(0.935)QGESK;EIDTDS(0.103)T(0.103)S(0.783)QGES(0.012)K 184.21 0.00012263 3448900 42816 48473 42141 44968 51452 39077 53285 38705 39996 48630 TRUE FALSE 46094.02588 46065.90131 43545.95991 41293.97055 49431.73595 40564.10262 46288.61549 43763.87639 43474.77978 47043.20708 0.979823204 0.979225358 0.925658827 0.877788168 1.050773088 0.862273326 0.983959606 0.93029109 0.924145748 1 15.5216988 EIEDFDSLEALR ddPTM_A459_MK2206_30min_R2 1 EIEDFDSLEALR 12 0 P46060;B0QYT5;B0QYT4 P46060 RANGAP1 Ran GTPase-activating protein 1 0 178.54 0.0014374 2125700 11145 9940.7 10762 12166 12757 11504 13008 8878.9 9353.8 13224 FALSE TRUE 11998.26977 9447.059293 11120.79971 11171.99888 12256.09608 11941.79278 11300.03397 10039.40272 10167.37662 12792.50196 0.937914241 0.7384841 0.869321712 0.873323992 0.958068728 0.93349939 0.883332596 0.784788054 0.794791875 1 13.64301083 -5.505321729 24.49551838 0.884067256 0.829625108 0.060593652 0.077029725 1571.276342 2192235.752 0.020745261 0.041724233 3.12E-06 5.505321729 -0.054442148 EIEIDIEPTDKVER ddPTM_A459_MK2206_30min_R2 1 EIEIDIEPTDKVER 14 1 F8VSA6;E9PS38;S4R3E9;E9PL57;Q15843 F8VSA6 NEDD8;NEDD8-MDP1 NEDD8 0 98 0.030157 1266900 10763 15751 10996 19396 11322 15127 12802 10175 12797 10989 FALSE TRUE 11587.02356 14968.82824 11362.60115 17811.28476 10877.44139 15702.66858 11121.08202 11504.90744 13910.05993 10630.42983 1.089986364 1.408111288 1.068875044 1.67549996 1.023236272 1.477143336 1.046155442 1.082261735 1.308513405 1 13.37591231 -7.289222028 24.9755313 1.116087785 1.291103648 0.159581038 0.203515968 1404.539273 1262620.656 0.079213063 0.053416867 5.14E-08 7.289222028 0.175015862 EIES(ph)SPQYR ddPTM_A459_MK2206_30min_R1 2 EIESSPQYR 9 0 H3BUF6;Q8WWM7-7;H3BSK9;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EIES(0.5)S(0.5)PQYR;EIES(0.499)S(0.499)PQY(0.002)R 103.21 0.01544 72020000 12096.6 11291.8 10849.3 9072.2 10964.5 10434.2 11464.6 10044.7 8673.9 8334.3 TRUE FALSE 11067.72065 10556.70177 10112.87974 9770.942416 10527.76075 11024.97539 10699.81745 9956.880247 9575.582945 9366.816005 1.181588348 1.127032042 1.079649663 1.043144481 1.123942302 1.17702487 1.142311053 1.062995178 1.02228793 1 13.19334301 -8.042402334 2.772256331 1.010573279 1.121878151 0.576264728 0.039369637 0.236528629 3.419659336 0.034932949 0.011942148 9.07E-09 8.042402334 0.111304872 EIES(ph)SPQYR ddPTM_A459_MK2206_30min_R2 1 EIESSPQYR 9 0 H3BUF6;Q8WWM7-7;H3BSK9;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EIES(0.926)S(0.074)PQYR 93.442 0.024562 60978000 100840 109370 94024 111890 96187 105890 110740 81194 90932 101710 TRUE FALSE 108560.3879 103938.8448 97158.71323 102748.2291 92410.21508 109919.7182 96199.70498 91806.33458 98841.10099 98391.21103 1.103354525 1.056383428 0.987473497 1.044282594 0.939212091 1.117170091 0.977726608 0.933074546 1.004572461 1 16.58624183 -1.522878749 0.618654687 0.994470645 8.975291973 0.303666999 0.049882686 237.0732683 1.718708441 0.021955766 2571.182156 0.03 1.522878749 7.980821328 EIESEIDS(ph)EEELINK ddPTM_A459_MK2206_30min_R1 1 EIESEIDSEEELINK 15 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 EIESEIDS(1)EEELINK 214.65 2.75E-07 3035300 913.59 1096.9 1259.3 862.11 785.25 658.94 928.3 717.2 1017.9 779.36 TRUE FALSE 835.884373 1025.491611 1173.822225 928.5098616 753.9718297 696.2486134 866.3748008 710.929596 1123.714348 875.9130007 0.954300681 1.170768798 1.340112801 1.060048042 0.860783924 0.794883296 0.989110562 0.811644074 1.282906347 1 9.774643772 -6.002162948 24.96735001 0.942475193 1.163873054 0.245276941 0.15555691 106.9259463 1234304.899 0.043742326 0.063710259 9.95E-07 6.002162948 0.221397861 EIESS(ph)PQYR ddPTM_A459_MK2206_30min_R1 1 EIESSPQYR 9 0 H3BUF6;Q8WWM7-7;H3BSK9;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EIES(0.392)S(0.608)PQYR 115.29 0.0082148 46699000 7304.1 6398.6 6070.4 5432.1 7070 6061.5 6660.2 6167.8 5654.3 4592.8 TRUE FALSE 6682.84794 5982.049977 5658.358161 5850.481283 6788.386929 6404.696892 6215.91021 6113.875575 6242.084719 5161.790738 1.294676262 1.15890982 1.096200611 1.133420857 1.315122459 1.240789721 1.204215848 1.184448554 1.209286667 1 12.33365594 -10.90427319 5.645345778 0.999935195 1.201303537 0.476972437 0.064062926 5.59E-05 6.12E-06 0.066316604 0.016078974 1.25E-11 10.90427319 0.201368343 EIESS(ph)PQYR ddPTM_A459_MK2206_30min_R2 2 EIESSPQYR 9 0 H3BUF6;Q8WWM7-7;H3BSK9;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EIES(0.33)S(0.67)PQYR;EIES(0.383)S(0.616)PQY(0.001)R 114.89 0.0083395 78889000 389310 390560 336350 403900 455170 368570 416020 307250 326490 385550 TRUE FALSE 419115.8729 371165.3583 347563.7411 370900.078 437297.7388 382596.1896 361396.0743 347408.6299 354887.51 372969.5351 1.123726829 0.99516267 0.931882388 0.994451404 1.172475759 1.025810833 0.968969421 0.931466507 0.951518761 1 18.50869827 -7.270533208 4.511624028 0.956057723 1.03791355 0.250504273 0.065656354 0.317054535 17.31166446 0.029626603 0.020756889 5.36E-08 7.270533208 0.081855827 EIEVGGGRK ddPTM_A459_MK2206_30min_R2 2 EIEVGGGRK 9 1 P62081;B5MCP9 P62081 RPS7 40S ribosomal protein S7 0 ; 92.051 0.035727 6879900 26079.1 37668.3 31682.5 33088.5 40080 37572.7 34920.1 25839.2 40500 34734.1 FALSE TRUE 28075.73595 35797.747 32738.77874 30385.06371 38506.25781 39002.55543 30335.04892 29216.47216 44022.61679 33600.72916 0.835569247 1.065386017 0.97434727 0.904297748 1.145994708 1.16076515 0.902809245 0.869518992 1.310168496 1 15.03620492 -4.755020872 24.9708127 1.029924878 0.835568918 0.173336987 0.131164152 408.9931769 1591012.339 0.032357761 0.29879031 1.76E-05 4.755020872 -0.194355961 EIHKPGYLANDR ddPTM_A459_MK2206_30min_R1 1 EIHKPGYLANDR 12 1 A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3;A0A2R8Y5P0;E9PNV3;P35241-3 A0A2R8Y5S7 RDX Radixin 0 73.082 0.04404 5006200 893.71 1150.3 1306.8 1112.7 936.34 1284.3 1725.3 1278.5 1243.9 1268.6 FALSE TRUE 817.6952714 1075.415261 1218.098057 1198.400347 899.0435951 1357.015956 1610.208385 1267.322209 1373.207856 1425.763745 0.573513862 0.754273115 0.854347756 0.840532206 0.630569825 0.95178178 1.1293655 0.888872517 0.963138431 1 10.47751923 -6.879330906 6.58178721 0.993201908 0.745722395 0.634333497 0.097193005 0.155029595 8.329336802 0.035554685 0.031371348 1.32E-07 6.879330906 -0.247479513 EIHQDWANR ddPTM_A459_MK2206_30min_R1 1 EIHQDWANR 9 0 Q8WUW1;Q8WUW1-2 Q8WUW1 BRK1 Protein BRICK1 0 131.12 0.0051713 5096900 2988 3121.2 2772.8 3119.9 3187.8 3062.2 3290.2 2913.9 2832.9 2467.9 FALSE TRUE 2733.854909 2918.009313 2584.590061 3360.195239 3060.823176 3235.579118 3070.716761 2888.42408 3127.390093 2773.642084 0.98565526 1.052049697 0.931839792 1.211473989 1.103539348 1.166545293 1.107106349 1.041383132 1.12753917 1 11.43756592 -5.750591855 24.99992459 1.112139006 0.996068407 0.433835554 0.061735871 201.2388862 463784.2058 0.016254702 0.027802061 1.78E-06 5.750591855 -0.116070599 EIHQDWANR ddPTM_A459_MK2206_30min_R2 2 EIHQDWANR 9 0 Q8WUW1;Q8WUW1-2 Q8WUW1 BRK1 Protein BRICK1 0 ; 125.71 0.0069945 9433600 58723 67432 61523 74493 65409 74554 59015 53980 71893 66377 FALSE TRUE 63218.87803 64083.42494 63574.14611 68406.68361 62840.71401 77391.20471 51266.25961 61035.37134 78146.12319 64211.12393 0.984547134 0.998011264 0.990079946 1.065340075 0.978657749 1.205261643 0.79840153 0.950542018 1.21701846 1 15.97053563 EIHQFNR ddPTM_A459_MK2206_30min_R1 2 EIHQFNR 7 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 0 ; 104.11 0.025572 7957800 7318.2 7190 7172.4 6334.7 7839.6 6961.1 7573.4 7440.9 4432 5653.8 FALSE TRUE 6695.748661 6721.929693 6685.557471 6822.599692 7527.332131 7355.231466 7068.192304 7375.844996 4892.72226 6354.235428 1.053745763 1.057866012 1.052141921 1.073708988 1.1846165 1.157532098 1.112359211 1.160776159 0.769993859 1 12.63350283 -8.251657042 24.99721878 0.884996923 1.106548826 0.624127897 0.068786917 381.036784 973685.5759 0.047872375 0.01758524 5.60E-09 8.251657042 0.221551903 EIHQFNR ddPTM_A459_MK2206_30min_R2 1 EIHQFNR 7 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 0 91.041 0.040545 11321000 14973 17187 15616 16554 13816 15407 17156 12409 12559 12607 FALSE TRUE 16119.34439 16333.51857 16136.62965 15201.48525 13273.51442 15993.32418 14903.39659 14030.89891 13651.35912 12195.63462 1.321730676 1.33929222 1.323148007 1.24646939 1.088382428 1.311397453 1.222027148 1.150485345 1.119364391 1 13.57407721 -1.522886957 0.046770812 0.485037527 2.519867405 0.711176633 0.059930902 319.8566131 1.136951806 12.24956592 48.25788556 0.029999433 1.522886957 2.034829878 EIIDLVLDR ddPTM_A459_MK2206_30min_R1 1 EIIDLVLDR 9 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;F8VQQ4;F8VS66;F8VRZ4;P68363 Q9BQE3;P68363 TUBA1C;TUBA1B;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain 0 139.96 0.032333 21041000 8523.9 8601.5 7749 7533.9 7598.7 7721.8 8258.3 7450.8 6672.1 8151.4 FALSE TRUE 7798.897544 8041.540787 7223.01947 8114.162283 7296.027688 8159.001643 7707.403875 7385.658441 7365.688671 9161.256972 0.851291211 0.877777014 0.788431052 0.885704037 0.796400288 0.890598492 0.84130419 0.806183962 0.804004155 1 13.16132984 -11.4614754 6.824062691 1.061511434 0.838573007 0.642065708 0.036291819 0.023380139 0.000210376 0.0241898 0.008198648 3.46E-12 11.4614754 -0.222938427 EIIDLVLDR ddPTM_A459_MK2206_30min_R2 2 EIIDLVLDR 9 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;F8VQQ4;F8VS66;F8VRZ4;P68363 Q9BQE3;P68363 TUBA1C;TUBA1B;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain 0 ; 143.7 0.027844 18920700 136294 141526 127778 149633 138135 147545 149663 109142 115674 142714 FALSE TRUE 146728.7734 134498.0246 132038.0547 137407.5052 132711.1258 153159.9284 130012.0683 123407.2341 125735.1154 138057.2539 1.062811039 0.97421918 0.956400704 0.995293629 0.961276008 1.109394284 0.941725731 0.893884462 0.910746172 1 17.07490717 -7.49984059 24.98211091 0.92495019 1.004853922 0.321380726 0.051345553 841.0025986 911969.6369 0.021374544 0.014290531 3.16E-08 7.49984059 0.079903733 EIIDPVLDR ddPTM_A459_MK2206_30min_R2 1 EIIDPVLDR 9 0 P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8 P68366-2 TUBA4A Tubulin alpha-4A chain 0 137.14 0.035728 3574500 47100 59695 55787 61327 57669 59907 57444 40433 49172 57584 FALSE TRUE 50706.01221 56730.6331 57646.91074 56316.38792 55404.6253 62186.80286 49901.5338 45717.73193 53448.89168 55705.0388 0.910258988 1.018411159 1.034859897 1.010974755 0.994607068 1.116358667 0.895817234 0.820710889 0.95949833 1 15.76552021 -7.305158012 24.99218091 0.904065798 1.014330234 0.335371473 0.064320473 468.1389638 267614.5634 0.026244717 0.01769429 4.95E-08 7.305158012 0.110264436 EIIKQEES(ph)VDPDYWEK ddPTM_A459_MK2206_30min_R1 1 EIIKQEESVDPDYWEK 16 1 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;F5GWX5;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y4X2 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 EIIKQEES(0.999)VDPDY(0.001)WEK 96.561 0.0044507 6378700 2852.9 3500.4 3798.2 3193.5 3190.1 2055.5 3388.4 2847.6 2979 2225.9 TRUE FALSE 2610.245874 3272.523324 3540.388766 3439.463923 3063.031562 2171.880634 3162.366018 2822.703733 3288.67771 2501.661297 1.043404987 1.308140046 1.41521507 1.374871941 1.224398989 0.868175335 1.264106385 1.128331696 1.31459751 1 11.28867076 -6.528781662 24.99782813 1.122813628 1.296720161 0.226354519 0.148710031 237.1336583 1004210.206 0.049387762 0.049526851 2.96E-07 6.528781662 0.173906534 EILDAFDK ddPTM_A459_MK2206_30min_R2 2 EILDAFDK 8 0 A0A0J9YXB8;C9JIZ6;P07602;P07602-2;P07602-3 A0A0J9YXB8 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D 0 ; 140.5 0.032375 7486700 58653 61195 58456 63096 53732 49136 58324 48132 47691 63086 FALSE TRUE 63143.51878 58156.14529 60404.89386 57940.85497 51622.2117 51005.90491 50665.98874 54423.01766 51839.07697 61027.50899 1.034673049 0.952949682 0.989797796 0.949421923 0.8458843 0.835785464 0.83021558 0.891778455 0.849437866 1 15.89717208 -6.092753395 3.562190292 0.866081262 0.987137669 0.524556876 0.050081785 0.176992384 4.194324652 0.014436161 0.019656213 8.08E-07 6.092753395 0.121056407 EILGT(ph)AQSVGCNVDGR ddPTM_A459_MK2206_30min_R2 1 EILGTAQSVGCNVDGR 16 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 1 EILGT(0.98)AQS(0.02)VGCNVDGR 102.03 0.012068 1978800 4198.3 8889.7 6442.2 6701.7 7560.6 8719.2 7921.1 5945.4 6063.6 7527.8 TRUE FALSE 4519.725076 8448.250425 6656.979733 6154.149672 7263.732855 9051.015266 6881.050055 6722.484194 6591.000968 7282.168502 0.620656481 1.160128391 0.914147995 0.845098499 0.997468385 1.242901103 0.94491772 0.923143181 0.905087676 1 12.83015241 -6.372053944 7.873220468 1.008239847 0.906994679 0.119885189 0.150668602 0.752781962 48.21136326 0.047219663 0.053535165 4.25E-07 6.372053944 -0.101245168 EILGTAQS(ph)VGCNVDGR ddPTM_A459_MK2206_30min_R2 1 EILGTAQSVGCNVDGR 16 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 1 EILGT(0.006)AQS(0.994)VGCNVDGR 151.31 0.00083632 0 10391 10297 11164 13121 16633 12040 13406 10414 7226.2 11099 TRUE FALSE 11186.54295 9785.665953 11536.20219 12048.97233 15979.90485 12498.19064 11645.7761 11775.14556 7854.721814 10736.84054 1.041884054 0.911410197 1.074450361 1.122208371 1.488324688 1.164047337 1.084655775 1.096704893 0.731567334 1 13.3902819 -8.140995145 6.320415404 0.868438035 1.128648695 0.319328071 0.150523843 0.292342689 13.61647357 0.113296377 0.04190149 7.23E-09 8.140995145 0.260210661 EILS(ph)PLFPR ddPTM_A459_MK2206_30min_R1 1 EILSPLFPR 9 0 A0A2R8YH03;Q5VWN6 A0A2R8YH03 FAM208B Protein FAM208B 1 EILS(1)PLFPR 128.27 0.0043642 2611000 747.85 850.53 765.33 712.71 647.54 648.36 659.16 581.47 589.07 613.84 TRUE FALSE 684.2414304 795.1603424 713.3815319 767.6030477 621.7471106 685.0695829 615.1886391 576.3862691 650.3059345 689.8871335 0.991816483 1.152594829 1.034055423 1.112650186 0.901230187 0.9930169 0.891723601 0.835479082 0.942626559 1 9.430216544 -6.265390062 24.97661617 0.920622424 1.075714361 0.580010354 0.060444784 226.1019468 1429437.493 0.018066881 0.021241796 5.43E-07 6.265390062 0.155091937 EILS(ph)PLFPR ddPTM_A459_MK2206_30min_R2 1 EILSPLFPR 9 0 A0A2R8YH03;Q5VWN6 A0A2R8YH03 FAM208B Protein FAM208B 1 EILS(1)PLFPR 103.88 0.014847 1422200 3373.8 3537.4 3247 4910.9 5817.5 4225.9 4220.1 3247.1 3356.7 4676.4 TRUE FALSE 3632.100722 3361.73786 3355.253359 4509.663761 5589.075719 4386.719586 3665.995801 3671.507119 3648.659698 4523.809451 0.802885436 0.743121013 0.741687597 0.996873058 1.235479916 0.969695924 0.810378032 0.811596324 0.806545841 1 12.14332245 -5.755485754 24.80371417 0.946619066 0.760620264 0.325714536 0.121742528 178.5274201 743761.3344 0.038368004 0.064259618 1.76E-06 5.755485754 -0.185998802 EILS(ph)PVDIIDR ddPTM_A459_MK2206_30min_R1 1 EILSPVDIIDR 11 0 A0A286YF41;A0A286YEZ7;A0A286YES4;O14495 A0A286YF41 PPAP2B Lipid phosphate phosphohydrolase 3 1 EILS(1)PVDIIDR 102.97 0.012409 0 592.62 403.91 463.37 448.13 380.94 320.28 502.38 463.08 553.01 356.37 TRUE FALSE 542.214557 377.6153856 431.9177354 482.6450502 365.7663531 338.4139768 468.8671468 459.0313404 610.4973685 400.5198061 1.353777139 0.942813264 1.078392951 1.205046649 0.913229128 0.844936934 1.170646594 1.146088991 1.524262619 1 8.645729777 -7.766835566 2.742888992 1.269126966 1.052781097 0.134064867 0.184816913 0.452878308 6.856245983 0.112720914 0.050580923 1.71E-08 7.766835566 -0.21634587 EIPFNEDPNPNTHS(ph)SGPSTPLK ddPTM_A459_MK2206_30min_R1 2 EIPFNEDPNPNTHSSGPSTPLK 22 0 Q86YS7-3;Q86YS7;H0YFE9 Q86YS7-3 C2CD5 C2 domain-containing protein 5 1 EIPFNEDPNPNTHS(0.366)S(0.366)GPS(0.04)T(0.227)PLK;EIPFNEDPNPNT(0.001)HS(0.892)S(0.079)GPS(0.014)T(0.014)PLK 156.02 4.34E-09 14931000 3290.1 2711.82 3348.2 2798.63 3518.6 3638.7 3551.6 3606.8 2913.87 2765.6 TRUE FALSE 3010.259718 2535.280025 3120.933513 3014.180968 3378.446711 3844.720049 3314.679244 3575.266128 3216.777214 3108.223407 0.968482417 0.815668532 1.004089187 0.96974399 1.086938186 1.236950999 1.066422457 1.150260345 1.034924712 1 11.60187449 -5.987233549 1.718242494 1.109214604 0.906246557 0.507569998 0.075805586 0.265265935 1.580465581 0.024530063 0.041245265 1.03E-06 5.987233549 -0.202968047 EIPFNEDPNPNTHS(ph)SGPSTPLK ddPTM_A459_MK2206_30min_R2 1 EIPFNEDPNPNTHSSGPSTPLK 22 0 Q86YS7-3;Q86YS7;H0YFE9 Q86YS7-3 C2CD5 C2 domain-containing protein 5 1 EIPFNEDPNPNT(0.009)HS(0.463)S(0.463)GPS(0.033)T(0.033)PLK 121.58 2.16E-05 11404000 23605 42825 29457 42484 42431 39881 48328 34493 32319 37892 TRUE FALSE 25412.21695 40698.37277 30439.08168 39012.9213 40764.94574 41398.6994 41982.47555 39001.35353 35130.0482 36655.58714 0.693269947 1.110291116 0.830407696 1.064310364 1.112107292 1.129396707 1.145322687 1.063994784 0.958381817 1 15.16174549 -4.407406075 2.454992714 1.0511528 2.70E-07 0.551380663 0.093350447 2.995930009 6.402117666 0.025306158 10.60173562 3.91E-05 4.407406075 -1.05115253 EIPS(ph)ATQS(ph)PISK ddPTM_A459_MK2206_30min_R1 1 EIPSATQSPISK 12 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 2 EIPS(1)AT(0.003)QS(0.996)PIS(0.001)K 157.09 0.0080331 8159000 4500.2 3541.1 3588.5 3236.8 3353.4 2509.3 2314.3 2152.6 1746.1 1766.4 TRUE FALSE 4117.434359 3310.573746 3344.922618 3486.098897 3219.826977 2651.374398 2159.91727 2133.780045 1927.613343 1985.234968 2.07402873 1.667597942 1.684900111 1.756013245 1.621887096 1.335546895 1.087990744 1.074824935 0.97097491 1 10.95509406 -6.897950413 1.069746977 0.985735849 1.811646827 0.920201798 0.102899344 0.132477794 0.318132184 0.060550711 0.047899878 1.26E-07 6.897950413 0.825910978 EIPS(ph)ATQS(ph)PISK ddPTM_A459_MK2206_30min_R2 2 EIPSATQSPISK 12 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 2 EIPS(1)AT(0.001)QS(0.993)PIS(0.007)K;EIPS(0.999)AT(0.001)QS(0.966)PIS(0.034)K 168 0.0073966 17412100 121543 109272 104047 109223 112905 83698 81216 48826 50936 62477 TRUE FALSE 130848.4255 103845.7114 107515.875 100299.1315 108471.7824 86883.18604 70552.24164 55207.72584 55366.32121 60438.38061 2.164988939 1.718208038 1.77893375 1.659527117 1.79474998 1.437549868 1.167341695 0.91345475 0.916078834 1 15.88317738 -7.132528834 1.231477081 0.911472709 1.837487263 0.901986897 0.129436409 0.133470771 0.403788862 0.078286269 0.05022685 7.37E-08 7.132528834 0.926014553 EIPSAT(ph)QSPISK ddPTM_A459_MK2206_30min_R1 1 EIPSATQSPISK 12 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 EIPS(0.006)AT(0.758)QS(0.182)PIS(0.054)K 144.51 0.0017232 217830000 10262 9211.5 10769 8313.2 8762.2 8483.5 10352 9669.3 9092.5 8500.3 TRUE FALSE 9389.163012 8611.829676 10038.03028 8953.484104 8413.18302 8963.828439 9661.436968 9584.76233 10037.69791 9553.381338 0.98281045 0.901443099 1.050730619 0.937205769 0.880649764 0.938288562 1.011310721 1.003284805 1.050695828 1 13.22179574 -7.290638026 7.090980632 1.016906997 0.947415086 0.351714453 0.045084808 0.258802502 48.85761946 0.019373152 0.013258872 5.12E-08 7.290638026 -0.069491911 EIPSATQS(ph)PISK ddPTM_A459_MK2206_30min_R1 3 EIPSATQSPISK 12 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 EIPS(0.001)AT(0.01)QS(0.989)PISK;EIPSAT(0.011)QS(0.82)PIS(0.17)K;EIPS(0.003)AT(0.013)QS(0.976)PIS(0.007)K 220.52 3.11E-08 728440000 28600.6 25971.1 26249.6 21927.6 24034.3 22995.2 28073.7 27112.5 24514 22826.5 TRUE FALSE 26167.96878 24280.37667 24467.85029 23616.46755 23076.96294 24297.16835 26200.9547 26875.45827 27062.31802 25654.41915 1.020017979 0.94644032 0.953747974 0.920561382 0.899531687 0.947094854 1.021303758 1.047595664 1.05487939 1 14.64691974 -7.30856018 4.002084817 1.037328727 0.944290228 0.617636138 0.031997937 0.15099312 5.171395647 0.014589854 0.009806785 4.91E-08 7.30856018 -0.093038499 EIPSATQS(ph)PISK ddPTM_A459_MK2206_30min_R2 5 EIPSATQSPISK 12 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 EIPSAT(0.011)QS(0.58)PIS(0.408)K;EIPSAT(0.05)QS(0.949)PIS(0.001)K;EIPSAT(0.011)QS(0.988)PIS(0.002)K;EIPSAT(0.046)QS(0.954)PISK;EIPSAT(0.01)QS(0.99)PISK 242.01 1.74E-13 1387260000 693351 730157 697719 724784 742286 703972 940593 630794 638353 756284 TRUE FALSE 746434.4857 693898.4651 720980.6032 665566.8287 713140.122 730762.1478 817092.0092 713240.9416 693875.7901 731606.515 1.020267685 0.948458565 0.98547592 0.909733327 0.974759119 0.998845872 1.116846273 0.974896925 0.948427571 1 19.4807084 -6.782998103 4.272876266 1.013916585 0.963925067 0.143212217 0.048551152 0.374549356 15.58935234 0.0178664 0.016417116 1.65E-07 6.782998103 -0.049991517 EIPSLS(ph)PTIPR ddPTM_A459_MK2206_30min_R2 1 EIPSLSPTIPR 11 0 Q9ULD5 Q9ULD5 ZNF777 Zinc finger protein 777 1 EIPS(0.33)LS(0.528)PT(0.142)IPR 105.25 0.011802 2875900 13000 19149 17784 21984 20166 20171 24089 18891 16687 19412 TRUE FALSE 13995.29 18198.08851 18376.90968 20187.83688 19374.18151 20938.62154 20926.08536 21360.11856 18138.4051 18778.58803 0.745279143 0.969087158 0.978609768 1.075045517 1.031716628 1.115026407 1.114358829 1.137472026 0.965908889 1 14.19680097 -4.105325633 0.904873064 1.07291881 2.02E-11 0.746125181 0.054628192 2.992086233 0.803665329 0.01804342 4.246299621 7.85E-05 4.105325633 -1.07291881 EIQGHQPR ddPTM_A459_MK2206_30min_R2 3 EIQGHQPR 8 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 0 ;; 125.31 0.0071951 5694500 62330 67223 71872 74482 84686 67590 77285 90031 93876 86136 FALSE TRUE 67102.03272 63884.80357 74268.17661 68396.58234 81360.80213 70162.18481 67137.38666 101798.3608 102041.1648 83325.38937 0.80530116 0.76669073 0.891303085 0.820837236 0.976422705 0.842026486 0.805725448 1.221696791 1.224610717 1 16.34646853 -7.76002337 25 1.167365366 0.847007701 0.753144009 0.079721184 16.82827897 297126.007 0.039528715 0.02121932 1.74E-08 7.76002337 -0.320357666 EIQNGNLHES(ph)DSESVPR ddPTM_A459_MK2206_30min_R1 4 EIQNGNLHESDSESVPR 17 0 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 EIQNGNLHES(0.99)DS(0.01)ESVPR;EIQNGNLHES(0.939)DS(0.055)ES(0.006)VPR;EIQNGNLHES(0.771)DS(0.229)ESVPR;EIQNGNLHES(0.914)DS(0.081)ES(0.005)VPR 271.73 1.02E-51 55482500 8555.7 8185.9 6132.24 6544.68 9478.4 7475.39 8333.3 7428.8 8904.1 6297.94 TRUE FALSE 7827.992787 7652.996422 5716.000634 7048.752388 9100.855257 7898.640122 7777.400762 7363.850785 9829.713059 7078.176354 1.105933562 1.081210193 0.807552729 0.995843002 1.285762717 1.11591457 1.098785955 1.040359892 1.388735257 1 12.78916199 -6.146376093 10.11421712 1.15211035 0.989269973 0.25935742 0.129894901 0.580289239 47.6586103 0.038227008 0.049389963 7.14E-07 6.146376093 -0.162840377 EIQNGNLHES(ph)DSESVPR ddPTM_A459_MK2206_30min_R2 4 EIQNGNLHESDSESVPR 17 0 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 EIQNGNLHES(1)DSESVPR;EIQNGNLHES(0.81)DS(0.142)ES(0.047)VPR;EIQNGNLHES(0.976)DS(0.018)ES(0.006)VPR;EIQNGNLHES(0.998)DS(0.002)ESVPR 178.1 8.69E-08 92060000 204327 139051 132945 152156 136538 193354 285344 122860 174768 153005 TRUE FALSE 219970.4322 132145.9295 137377.3199 139724.3681 131176.8321 200712.222 247877.99 138918.2238 189969.0047 148012.4594 1.486161592 0.892802742 0.928146999 0.944004097 0.886255337 1.356049503 1.674710299 0.938557635 1.283466308 1 17.1753591 -6.766859517 24.99882098 1.273226213 1.009837003 0.162123881 0.249333422 221.7871059 1022922.314 0.087050091 0.078980316 1.71E-07 6.766859517 -0.26338921 EIQSTLEGDRGS(ph)GNWR ddPTM_A459_MK2206_30min_R1 2 EIQSTLEGDRGSGNWR 16 1 J3QRV5;Q6P1M3 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 EIQSTLEGDRGS(1)GNWR;EIQSTLEGDRGS(1)GNWR 250.1 1.01E-28 12356400 2059.3 2764.72 2878.3 1928.38 2713.2 3019.5 3505.6 3026 2436.06 2255.22 TRUE FALSE 1884.145721 2584.736225 2682.929015 2076.904162 2605.127499 3190.461481 3271.74782 2999.544001 2689.297155 2534.61368 0.743366035 1.019775221 1.058515953 0.819416457 1.027820342 1.258756514 1.290827019 1.18343242 1.061028423 1 11.30755016 -6.559752559 5.536379042 1.176924642 0.927607795 0.497516619 0.116593366 0.155688221 12.31922838 0.03896208 0.0395371 2.76E-07 6.559752559 -0.249316847 EIS(ph)DDEAEEEK ddPTM_A459_MK2206_30min_R1 2 EISDDEAEEEK 11 0 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 1 EIS(1)DDEAEEEK;EIS(1)DDEAEEEK 198.97 1.96E-05 26193200 3319.6 3965 3952.8 2336.21 2156.8 2496.4 3641.5 2870 5272.4 8344 TRUE FALSE 3037.250588 3706.877779 3684.494949 2516.145299 2070.890089 2637.744011 3398.582179 2844.907893 5820.484847 9377.717714 0.323879507 0.395285707 0.392898897 0.268311051 0.220830926 0.281277822 0.362410373 0.303368898 0.620671791 1 13.19502114 -8.556961281 2.286492674 0.999243915 0.316953021 0.94029658 0.053866272 0.078147462 0.959033345 0.058109434 0.015927851 2.77E-09 8.556961281 -0.682290894 down EIS(ph)DDEAEEEK ddPTM_A459_MK2206_30min_R2 2 EISDDEAEEEK 11 0 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 1 EIS(1)DDEAEEEK;EIS(1)DDEAEEEK 185.57 1.90E-05 128015000 307720 148651 187988 139500 127229 89105 201225 134710 91947 238075 TRUE FALSE 331279.2798 141269.2075 194255.4261 128102.4038 122233.3502 92495.95321 174803.9158 152317.0595 99944.38386 230306.6322 1.438427007 0.613396176 0.843464316 0.556225422 0.530741772 0.401620884 0.759005132 0.661366362 0.433962248 1 17.81319643 -2.961963313 1.52576881 0.616571172 199.9998413 0.625497438 0.18068886 206.8241091 2.601082759 0.048162876 142493.9671 0.001091533 2.961963313 199.3832701 EIS(ph)DDEAEEEKGEK ddPTM_A459_MK2206_30min_R1 1 EISDDEAEEEKGEK 14 1 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 1 EIS(1)DDEAEEEKGEK 193.96 0.00056025 11193000 1397.4 2379.9 2077.3 1085.2 1428.8 1207.2 2062.4 1734.4 3051.2 4401.7 TRUE FALSE 1278.543792 2224.968077 1936.298664 1168.782292 1371.88787 1275.550621 1924.821059 1719.236324 3368.383159 4947.015827 0.258447484 0.449759644 0.391407412 0.236260067 0.277316249 0.257842438 0.389087306 0.347529982 0.680891931 1 12.2723428 -8.492647253 1.945705151 0.999910551 0.321346011 0.915335955 0.06623053 0.089999972 0.764679082 0.06683681 0.018835817 3.22E-09 8.492647253 -0.67856454 down EIS(ph)DDEAEEEKGEK ddPTM_A459_MK2206_30min_R2 5 EISDDEAEEEKGEK 14 1 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 1 EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK 190.44 0.00048366 487812000 1407051 584371 1027714 683243 598043 333636 803422 679347 380301 1130058 TRUE FALSE 1514775.906 555351.9859 1061977.472 627419.8613 574560.8269 346332.7518 697931.7263 768139.9854 413378.8936 1093184.3 1.385654648 0.508013137 0.971453278 0.573937863 0.525584594 0.316810946 0.638439215 0.702662841 0.378141996 1 20.06010521 -3.123796833 1.720041501 0.602925428 200 0.507064973 0.218801356 281.4696041 4.185891785 0.05778198 218829.5021 0.000751975 3.123796833 199.3970746 EIS(ph)PGSGPGEIR ddPTM_A459_MK2206_30min_R1 2 EISPGSGPGEIR 12 0 E9PK52;E9PHY5;O43491-4;E9PMG5;O43491;E9PMV8;Q6R5J7 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 EIS(0.998)PGS(0.002)GPGEIR;EIS(0.999)PGS(0.001)GPGEIR 193.15 0.00012144 61757000 9006.5 8733.1 8672.3 8564.9 8853.5 8362.8 9352.4 9102.2 8165 7314.2 TRUE FALSE 8240.44988 8164.573603 8083.648438 9224.570082 8500.846347 8836.294509 8728.51846 9022.620425 9013.780969 8220.338315 1.002446562 0.993216251 0.983371746 1.122164287 1.03412366 1.07493076 1.061819858 1.097597213 1.096521898 1 13.00498206 -5.741823826 24.99977611 1.072081025 0.993031953 0.534499178 0.032693439 173.0195708 220509.6368 0.008376678 0.01448219 1.81E-06 5.741823826 -0.079049071 EIS(ph)PGSGPGEIR ddPTM_A459_MK2206_30min_R2 2 EISPGSGPGEIR 12 0 E9PK52;E9PHY5;O43491-4;E9PMG5;O43491;E9PMV8;Q6R5J7 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 EIS(0.957)PGS(0.043)GPGEIR;EIS(0.604)PGS(0.396)GPGEIR 136.01 0.0014423 93666000 174251 209441 191252 242330 171959 181006 205967 153843 189850 186691 TRUE FALSE 187591.7905 199040.4645 197628.2462 222530.8638 165207.0256 187894.3102 178923.2855 173950.8083 206362.8098 180599.288 1.038718329 1.102111015 1.094291392 1.232180184 0.91477119 1.040393416 0.990719773 0.963186568 1.142655722 1 17.46243268 -6.269846175 24.98883089 1.007473994 1.114164656 0.357617641 0.07099972 701.5981858 2085465.351 0.021500407 0.024764863 5.37E-07 6.269846175 0.106690663 EIS(ph)PYENK ddPTM_A459_MK2206_30min_R2 2 EISPYENK 8 0 H0YCZ2;Q8NG31-4;Q8NG31-2;Q8NG31 H0YCZ2 CASC5 Protein CASC5 1 EIS(0.998)PY(0.002)ENK;EIS(1)PYENK 99.788 0.018368 5491800 100422 114013 99472 113910 105219 80732 112681 83064 83151 114391 TRUE FALSE 108110.3855 108351.2802 102788.3468 104603.1886 101087.5734 83804.31283 97885.84935 93920.75 90383.32368 110658.431 0.976973779 0.9791507 0.928879489 0.945279882 0.91350991 0.757324246 0.884576516 0.848744638 0.816777563 1 16.75575385 -6.530478043 24.94862409 0.851468001 0.953604481 0.36325468 0.059254684 172.7377708 567096.3062 0.018486594 0.018520764 2.95E-07 6.530478043 0.10213648 EIS(ph)QDSLAAR ddPTM_A459_MK2206_30min_R1 1 EISQDSLAAR 10 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 EIS(0.887)QDS(0.113)LAAR 122.34 0.0044941 5770100 1502.7 1339.4 1446.4 1357.1 2000.2 1786.4 1853.7 1559.3 1330.8 1236.2 TRUE FALSE 1374.887474 1252.204817 1348.222398 1461.624077 1920.527799 1887.544424 1730.043055 1545.667204 1469.141422 1389.349789 0.989590588 0.901288377 0.970398102 1.052020225 1.382321294 1.358581143 1.245217777 1.112511203 1.057430918 1 10.44019415 -6.026411975 5.704294633 1.210657099 0.956615796 0.46148611 0.116011075 0.159740941 16.36109811 0.036551563 0.049771597 9.41E-07 6.026411975 -0.254041303 EIS(ph)SSPTSK ddPTM_A459_MK2206_30min_R2 1 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EIS(0.588)S(0.315)S(0.096)PTSK 152.04 0.0011492 159350000 223230 241950 208860 233600 204830 152570 226560 183080 181030 216230 TRUE FALSE 240320.6604 229935.1148 215823.2882 214514.1328 196787.345 158376.1583 196812.3999 207009.1846 196775.6622 209174.4328 1.148900739 1.099250572 1.031786176 1.025527498 0.940781062 0.75714874 0.940900842 0.9896486 0.94072521 1 17.674347 -5.707132855 1.339984808 0.922164317 1.130625378 0.578799729 0.065452591 0.356559273 1.259103653 0.023846012 0.063279971 1.96E-06 5.707132855 0.208461061 EIS(ph)TPTHWSK ddPTM_A459_MK2206_30min_R1 1 EISTPTHWSK 10 0 F5H1H2;F5H2E6;A0A0C4DGG8;Q8IX12-2;Q8IX12 F5H1H2 CCAR1 Cell division cycle and apoptosis regulator protein 1 1 EIS(0.59)T(0.409)PT(0.001)HWSK 80.871 0.030762 11514000 12531 5305.7 7385.7 4068.8 17570 17637 17910 10955 5733.6 5937.6 TRUE FALSE 11465.17265 4960.297966 6884.379262 4382.179681 16870.14969 18635.5917 16715.25658 10859.22159 6329.628238 6673.194715 1.718093528 0.743316834 1.031646693 0.656683923 2.528046972 2.792604217 2.504835734 1.627289785 0.948515443 1 12.70416188 -6.25569125 24.98496179 2.006430312 1.016013308 0.294611432 0.641173706 568.7046234 2471943.657 0.201716089 0.253350179 5.55E-07 6.25569125 -0.990417003 EISELNETFLS(ph)DSEK ddPTM_A459_MK2206_30min_R1 1 EISELNETFLSDSEK 15 0 Q8IWJ2;B8ZZW2 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 1 EISELNET(0.079)FLS(0.46)DS(0.46)EK 83.862 0.022681 4403000 724.07 627.99 865.68 855.32 658 677.42 576.25 656.77 587.47 579.31 TRUE FALSE 662.4840443 587.1077369 806.9200535 921.1968946 631.7904667 715.774935 537.8094139 651.0279291 648.5396088 651.0792964 1.01751668 0.901745364 1.239357568 1.414876651 0.97037407 1.099366758 0.826027516 0.999921104 0.996099265 1 9.346689453 -6.763686783 2.318466079 0.962759743 1.13039814 0.196011868 0.144235788 0.516585712 5.700131455 0.06004616 0.055364847 1.72E-07 6.763686783 0.167638397 EISS(ph)SPTSK ddPTM_A459_MK2206_30min_R1 3 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EIS(0.035)S(0.719)S(0.243)PT(0.002)S(0.001)K;EIS(0.087)S(0.682)S(0.231)PTSK;EIS(0.053)S(0.84)S(0.107)PTSK 175.65 0.00033454 160968900 31311.7 29114 25984.4 24767.2 20119.6 18108.8 27129.1 27617.2 5200.7 18180.8 TRUE FALSE 28648.47549 27218.67331 24220.65132 26674.77404 19318.19373 19134.10461 25319.36724 27375.74573 5741.331376 20433.17476 1.402056989 1.332082441 1.185359182 1.305463999 0.945432805 0.936423479 1.239130362 1.339769568 0.280980878 1 14.31862576 -5.333875353 0.32099036 0.866101299 1.680611034 0.300576773 0.264833298 7.073533856 0.775671277 0.293974953 2.186978816 4.64E-06 5.333875353 0.814509735 EISS(ph)SPTSK ddPTM_A459_MK2206_30min_R2 3 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EIS(0.006)S(0.762)S(0.232)PTSK;EIS(0.02)S(0.659)S(0.321)PTSK;EIS(0.001)S(0.499)S(0.499)PTSK 169.99 0.00066331 211355500 432293 451737 442877 440722 472640 313826 429887 387881 370269 437887 TRUE FALSE 465389.6845 429304.3975 457642.2981 404713.6028 454081.7788 325768.8683 373442.3205 438578.3785 402474.3283 423598.7831 1.098656802 1.013469383 1.080367358 0.955417293 1.071961953 0.769050529 0.881594413 1.035362697 0.950130983 1 18.69233892 EISSS(ph)PTSK ddPTM_A459_MK2206_30min_R1 2 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EIS(0.025)S(0.097)S(0.874)PT(0.003)SK;EIS(0.001)S(0.071)S(0.927)PT(0.001)SK 175.49 0.00030639 143357000 21984 21762 18097.5 16664.6 12946.8 12832.7 19311 18617.7 3492.1 12140.3 TRUE FALSE 20114.14536 20345.28984 16869.09212 17948.11038 12431.10154 13559.27638 18022.79842 18454.92741 3855.116292 13644.33202 1.474175894 1.491116591 1.2363443 1.315426095 0.911081724 0.99376623 1.320900019 1.352570971 0.282543424 1 13.73601415 -4.120538444 0.284384854 0.880256894 2.35130122 0.349249493 0.277282985 15.13100669 0.752518097 0.33051801 8.275757423 7.58E-05 4.120538444 1.471044326 EISSS(ph)PTSK ddPTM_A459_MK2206_30min_R2 2 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EIS(0.028)S(0.197)S(0.774)PT(0.001)SK;EIS(0.023)S(0.134)S(0.815)PT(0.022)S(0.006)K 146.71 0.0017163 66696600 162309 158792 146124 162172 159572 127573 169996 127110 126692 160212 TRUE FALSE 174735.5018 150906.6202 150995.7012 148922.0288 153306.4015 132427.8799 147675.321 143723.7134 137711.4412 154984.2956 1.127440049 0.973689751 0.974264526 0.960884639 0.98917378 0.854459992 0.952840547 0.927343722 0.888550938 1 17.24176251 -1.522878753 0.823035659 0.932736494 55.76101003 0.630246631 0.042130164 355.727127 1.117559965 0.014435096 36440.713 0.029999999 1.522878753 54.82827354 EIT(ph)ALAPSTMK ddPTM_A459_MK2206_30min_R1 3 EITALAPSTMK 11 0 P60709;P63267-2;A0A2R8YFE2;P63261;P68133;P68032;P63267;P62736;A6NL76 P60709;P63261;P68133 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle" 1 EIT(0.998)ALAPS(0.002)TMK;EIT(0.957)ALAPS(0.042)TMK;EIT(0.993)ALAPS(0.007)TMK 158.25 0.001335 59970000 14831.8 14502.4 13040.3 12614.7 13169 12490.3 14434.4 13065.5 11955.7 10181.7 TRUE FALSE 13570.27753 13558.29112 12155.16077 13586.28638 12644.45084 13197.48999 13471.50751 12951.26971 13198.5378 11443.08586 1.185893184 1.184845704 1.062227524 1.187292182 1.104986102 1.153315648 1.17726177 1.131798701 1.153407215 1 13.48218854 -10.86566267 2.783782318 0.997817691 1.147788583 0.575569481 0.038373083 4124830.294 4744078.755 73557.25041 0.009559311 1.36E-11 10.86566267 0.149970891 EIT(ph)ALAPSTMK ddPTM_A459_MK2206_30min_R2 2 EITALAPSTMK 11 0 P60709;P63267-2;A0A2R8YFE2;P63261;P68133;P68032;P63267;P62736;A6NL76 P60709;P63261;P68133 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle" 1 EIT(0.992)ALAPS(0.006)T(0.002)MK;EIT(0.995)ALAPS(0.005)TMK 143.76 0.0019015 31837000 219950 288740 248990 278340 226400 229790 290250 243850 220430 225990 TRUE FALSE 236789.5411 274401.5915 257291.2023 255598.7316 217510.3984 238534.8195 252139.8263 275722.0323 239602.603 218615.9648 1.083130142 1.255176362 1.176909484 1.169167731 0.994942884 1.091113449 1.153345898 1.261216364 1.095997738 1 17.73803923 -12.17710055 1.279865423 1.33E-05 1.145440132 0.235263246 0.076804086 158783.5644 8239.778891 455535.0638 0.022891436 6.65E-13 12.17710055 1.145426844 EITALAPS(ph)TMK ddPTM_A459_MK2206_30min_R1 3 EITALAPSTMK 11 0 P60709;P63267-2;A0A2R8YFE2;P63261;P68133;P68032;P63267;P62736;A6NL76 P60709;P63261;P68133 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle" 1 EITALAPS(0.761)T(0.239)MK;EITALAPS(0.959)T(0.041)MK;EITALAPS(0.96)T(0.04)MK 191.79 2.00E-05 55100800 20074 23109.3 19471.6 17966.4 18151.9 17435.4 18322 17285.9 18385.1 15424.1 TRUE FALSE 18366.60089 21604.88037 18149.92204 19350.17524 17428.87139 18422.57728 17099.77281 17134.7712 20296.29694 17334.95395 1.059512528 1.246318878 1.047012994 1.116251897 1.005417807 1.062741633 0.986433126 0.988452075 1.170830738 1 14.08139638 -5.763623125 1.562360828 1.035490893 1.146424675 0.226541804 0.071858697 0.523335682 2.585571775 0.022250433 0.049550047 1.72E-06 5.763623125 0.110933781 EITALAPS(ph)TMK ddPTM_A459_MK2206_30min_R2 7 EITALAPSTMK 11 0 P60709;P63267-2;A0A2R8YFE2;P63261;P68133;P68032;P63267;P62736;A6NL76 P60709;P63261;P68133 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle" 1 EIT(0.031)ALAPS(0.966)T(0.003)MK;EITALAPS(0.821)T(0.179)MK;EITALAPS(0.902)T(0.098)MK;EITALAPS(0.838)T(0.162)MK;EIT(0.312)ALAPS(0.682)T(0.006)MK;EITALAPS(0.79)T(0.21)MK;EITALAPS(0.97)T(0.03)MK 142.39 0.00092532 189630700 432824 476667 418079 462785 438113 356930 544542 416803 336702 429254 TRUE FALSE 465961.3382 452996.4099 432017.5452 424973.9851 420910.4823 370513.2213 473042.9813 471280.5832 365987.7313 415247.4771 1.122129246 1.090907073 1.040385719 1.023423401 1.013637663 0.892270855 1.139183276 1.134939064 0.881372559 1 18.66361188 -5.190806949 1.743015528 1.01789812 1.126192171 0.183053602 0.079499139 0.909630386 4.541746948 0.023400082 0.124499032 6.44E-06 5.190806949 0.10829405 EITALAPST(ph)MK ddPTM_A459_MK2206_30min_R1 2 EITALAPSTMK 11 0 P60709;P63267-2;A0A2R8YFE2;P63261;P68133;P68032;P63267;P62736;A6NL76 P60709;P63261;P68133 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle" 1 EITALAPS(0.369)T(0.631)MK;EITALAPS(0.345)T(0.655)MK 209.67 4.35E-05 45903100 12609.8 14416.5 14485 13065.4 11781.9 11922.9 12566 11883.6 12280.3 10497.9 TRUE FALSE 11537.27029 13477.98323 13501.79856 14071.69937 11312.60197 12597.96429 11727.74507 11779.70294 13556.88113 11798.45911 0.977862464 1.142351142 1.144369653 1.19267264 0.958820289 1.067763526 0.994006502 0.998410287 1.149038278 1 13.52631083 -6.263294668 24.9995444 1.02821485 1.118463462 0.261279794 0.070957739 230.5087525 3106042.707 0.021431074 0.025574928 5.45E-07 6.263294668 0.090248612 EITALAPST(ph)MK ddPTM_A459_MK2206_30min_R2 4 EITALAPSTMK 11 0 P60709;P63267-2;A0A2R8YFE2;P63261;P68133;P68032;P63267;P62736;A6NL76 P60709;P63261;P68133 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle" 1 EITALAPS(0.238)T(0.762)MK;EITALAPS(0.196)T(0.804)MK;EITALAPS(0.352)T(0.648)MK;EITALAPS(0.327)T(0.673)MK 211.22 4.48E-05 52580300 393390 459048 416794 403199 397167 326947 491669 411714 342020 392095 TRUE FALSE 423508.2409 436252.3438 430689.7039 370256.3519 381572.228 339389.1972 427112.2697 465526.4334 371768.2814 379300.9723 1.116549315 1.150148235 1.135482731 0.976154503 1.005988004 0.894775447 1.126051081 1.227327287 0.980140597 1 18.53298354 -5.735151405 23.78277054 1.036893872 1.135669086 0.23167816 0.086147158 223.906831 202565.5825 0.025425026 0.044014652 1.84E-06 5.735151405 0.098775214 EITALAPSTMK ddPTM_A459_MK2206_30min_R1 1 EITALAPSTMK 11 0 P60709;P63267-2;A0A2R8YFE2;P63261;P68133;P68032;P63267;P62736;A6NL76 P60709;P63261;P68133 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle" 0 218.6 0.00021357 74108000 6692.5 6566 5875.7 5912.8 6849.6 7224.1 6013.1 6285.1 5422.4 5948.4 FALSE TRUE 6123.267731 6138.552207 5476.873855 6368.204881 6576.765928 7633.122299 5611.977071 6230.150033 5986.077884 6685.3327 0.915925655 0.918211925 0.819237292 0.952563644 0.983760453 1.141771493 0.839446191 0.931913236 0.895404635 1 12.70678364 -5.96910778 23.44913176 0.964833786 0.887511291 0.178576011 0.078063625 191.8019945 145587.052 0.022979386 0.034083287 1.07E-06 5.96910778 -0.077322496 EITSHEEGGGDVS(ph)PR ddPTM_A459_MK2206_30min_R2 1 EITSHEEGGGDVSPR 15 0 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 EITSHEEGGGDVS(1)PR 75.91 0.024992 5082000 52032 37115 39581 42955 37298 33356 45521 39592 37027 36963 TRUE FALSE 56015.60993 35271.92307 40900.61078 39445.43909 35833.49311 34625.38595 39544.03802 44766.81034 40247.54153 35756.90034 1.566567834 0.98643682 1.143852247 1.103155998 1.002142042 0.968355356 1.105913478 1.251976819 1.125588101 1 15.12593406 -4.754458235 24.9998879 1.082426822 1.566568668 0.752993956 0.084161022 129.6476356 464235.322 0.02244844 0.218440395 1.76E-05 4.754458235 0.484141845 EIVHLQAGQCGNQIGAK ddPTM_A459_MK2206_30min_R1 2 EIVHLQAGQCGNQIGAK 17 0 P04350;M0QY85;M0R2D3;M0QZL7;M0QYM7;M0R278;M0R0X0;M0QY37;M0QX14;M0R042;M0R2T4;P68371 P04350;P68371 TUBB4A;TUBB4B Tubulin beta-4A chain;Tubulin beta-4B chain 0 ; 184.01 8.88E-08 44979000 15518.3 15034.1 16088.2 14692.4 15498.7 13939.7 14440.9 15263.2 11925.5 11273.2 FALSE TRUE 14198.3871 14055.37736 14996.17781 15824.01119 14881.35396 14728.95377 13477.57391 15129.75545 13165.1984 12669.80912 1.120647277 1.109359835 1.183615133 1.24895419 1.17455234 1.16252373 1.063755087 1.194158121 1.039099979 1 13.62910717 -8.394252485 4.338487004 1.001881057 1.156992309 0.568460739 0.048383685 0.167574899 4.761110162 0.049698744 0.013039669 4.03E-09 8.394252485 0.155111251 EIVHLQAGQCGNQIGAK ddPTM_A459_MK2206_30min_R2 1 EIVHLQAGQCGNQIGAK 17 0 P04350;M0QY85;M0R2D3;M0QZL7;M0QYM7;M0R278;M0R0X0;M0QY37;M0QX14;M0R042;M0R2T4;P68371 P04350;P68371 TUBB4A;TUBB4B Tubulin beta-4A chain;Tubulin beta-4B chain 0 251.05 1.89E-30 14013000 109240 121450 120800 135420 124940 134110 143510 97587 109530 123360 FALSE TRUE 117603.4984 115418.9696 124827.4117 124355.7528 120034.2278 139213.65 124666.9646 110341.956 119056.7214 119334.7733 0.985492285 0.967186398 1.046027141 1.04207474 1.00586128 1.166580756 1.044682628 0.924642105 0.997669984 1 16.86465497 -7.737720244 24.93707285 0.970867022 1.038517172 0.219699158 0.054016065 328.3591434 345220.4737 0.027133211 0.015653792 1.83E-08 7.737720244 0.06765015 EIVLADVIDNDSWR ddPTM_A459_MK2206_30min_R2 2 EIVLADVIDNDSWR 14 0 E9PBS1;P22234;P22234-2;D6RF62 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 0 ; 202.18 0.0006932 3499300 13984.5 17005.6 13736.7 19880.3 16221.4 16396 16198.6 19146.6 13530.5 15681.8 FALSE TRUE 15055.16407 16161.12663 14194.67472 18256.0159 15584.46633 17019.96127 14071.70436 21649.12636 14707.35843 15170.10415 0.992423251 1.065327335 0.935700545 1.203420604 1.027314393 1.121940964 0.927594446 1.427091478 0.969496207 1 13.88894337 -5.751197732 24.99774821 1.105604822 1.004568099 0.094873385 0.137573779 492.4398204 1201931.893 0.035616826 0.06079543 1.77E-06 5.751197732 -0.101036723 EKAEGDVAALNR ddPTM_A459_MK2206_30min_R2 1 EKAEGDVAALNR 12 1 P67936;A0A2R8Y5V9;A0A2R8YGX3;A0A2R8YH90 P67936 TPM4 Tropomyosin alpha-4 chain 0 108.98 0.022066 6824000 30553 32975 30065 35848 30774 29797 37056 32747 31889 32030 FALSE TRUE 32892.16117 31337.50945 31067.35209 32919.10373 29565.65813 30930.94571 32190.50269 37027.14534 34662.64758 30984.86372 1.06155578 1.011381226 1.002662215 1.062425319 0.95419681 0.99825986 1.038910578 1.195007526 1.118696144 1 14.919276 -7.56693851 11.38751926 1.117628156 1.014132962 0.353616645 0.053282082 0.61479917 156.3165124 0.024032369 0.013873263 2.71E-08 7.56693851 -0.103495195 EKDDLS(ph)PQPLMTDFER ddPTM_A459_MK2206_30min_R1 1 EKDDLSPQPLMTDFER 16 1 Q5THJ4-2;Q5THJ4 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 EKDDLS(1)PQPLMTDFER 76.573 0.016006 3298600 3856.8 3692.7 3979 3673 3567.6 3662.6 3883.4 3401.4 3286.2 2823.4 TRUE FALSE 3528.758907 3452.304559 3708.916566 3955.895096 3425.494937 3869.973247 3624.345472 3371.661918 3627.81225 3173.184108 1.112056152 1.087962262 1.168831193 1.246664222 1.079513454 1.219586735 1.142179385 1.06254847 1.143271908 1 11.63171551 -8.985331577 0.698906477 0.999157336 1.150922281 0.37082224 0.055760071 1.720478195 1.453104159 0.063393541 0.021261527 1.03E-09 8.985331577 0.151764945 EKDDLS(ph)PQPLMTDFER ddPTM_A459_MK2206_30min_R2 1 EKDDLSPQPLMTDFER 16 1 Q5THJ4-2;Q5THJ4 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 EKDDLS(1)PQPLMTDFER 84.159 0.0095587 3338000 20928 20961 19775 20073 19805 13361 23377 17344 16663 20490 TRUE FALSE 22530.26377 19920.10722 20434.28863 18432.97169 19027.35619 13869.46222 20307.57182 19610.92035 18112.31762 19821.41298 1.13666285 1.004979173 1.030919877 0.929952456 0.959939446 0.699721167 1.024526952 0.989380544 0.913775302 1 14.27477219 -4.849029945 0.977068111 0.926350937 1.211986813 0.328331744 0.08783638 2.222689796 1.819471304 0.030520609 0.656942042 1.42E-05 4.849029945 0.285635876 EKDLLPS(ph)PAGPVPSKDPK ddPTM_A459_MK2206_30min_R1 2 EKDLLPSPAGPVPSKDPK 18 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 EKDLLPS(1)PAGPVPSKDPK;EKDLLPS(1)PAGPVPSKDPK 58.952 0.021396 72202000 18391.1 20129.3 20229.6 18197.1 15820.3 13569.6 14558.6 16699.2 15703.8 13585.5 TRUE FALSE 16826.84037 18818.87891 18856.47111 19598.6438 15190.14395 14337.89903 13587.42236 16553.20065 17336.26621 15268.57431 1.102057077 1.232523649 1.234985712 1.28359357 0.994863282 0.939046354 0.889894635 1.084135318 1.135421413 1 13.89827774 -6.271481148 24.94952338 1.002157954 1.216213527 0.631670513 0.077015336 460.6684979 1144562.939 0.025798184 0.029599777 5.35E-07 6.271481148 0.214055573 EKDLLPS(ph)PAGPVPSKDPK ddPTM_A459_MK2206_30min_R2 1 EKDLLPSPAGPVPSKDPK 18 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 EKDLLPS(0.999)PAGPVPS(0.001)KDPK 66.939 0.011922 36952000 209480 269060 242280 239340 261490 164270 281600 202470 214140 250050 TRUE FALSE 225517.9499 255698.8716 250357.4943 219785.1564 251222.5887 170521.41 244625.5817 228933.5242 232765.5101 241890.889 0.932312708 1.057083517 1.035001754 0.908612794 1.038578137 0.704951768 1.011305481 0.946433018 0.962274814 1 17.8839969 -5.75990457 24.9995911 0.934072349 1.013027753 0.104545672 0.091795512 83.41918354 1358710.624 0.024802301 0.040192183 1.74E-06 5.75990457 0.078955404 EKDS(ph)PHMQDPNQADEEAMTQIIR ddPTM_A459_MK2206_30min_R1 1 EKDSPHMQDPNQADEEAMTQIIR 23 1 P23511-2;P23511 P23511-2 NFYA Nuclear transcription factor Y subunit alpha 1 EKDS(1)PHMQDPNQADEEAMTQIIR 101.62 1.72E-05 4609500 1085.1 1300 983.71 988 1140.6 1097.3 1009.4 1041.1 938.84 938.41 TRUE FALSE 992.8065469 1215.369764 916.938506 1064.095931 1095.167487 1159.428178 942.0647678 1031.997772 1036.435778 1054.667315 0.941345704 1.152372645 0.869410185 1.008939896 1.038400897 1.099330719 0.89323406 0.978505503 0.98271347 1 10.04257227 -7.269376061 24.97430425 0.961822059 1.018114717 0.106670646 0.077459743 1428.616588 4495398.477 0.031396781 0.021590499 5.38E-08 7.269376061 0.056292658 EKDS(ph)PHMQDPNQADEEAMTQIIR ddPTM_A459_MK2206_30min_R2 1 EKDSPHMQDPNQADEEAMTQIIR 23 1 P23511-2;P23511 P23511-2 NFYA Nuclear transcription factor Y subunit alpha 1 EKDS(1)PHMQDPNQADEEAMTQIIR 75.224 0.00039677 8533600 13279 11291 13687 16426 15675 15572 17605 13889 12397 15908 TRUE FALSE 14295.65045 10730.30536 14143.31775 15083.94326 15059.52074 16164.60337 15293.44235 15704.33999 13475.26865 15388.92326 0.92895716 0.697274603 0.919058306 0.980181849 0.97859483 1.050405093 0.993795478 1.020496348 0.875647271 1 13.90960467 -5.500303302 5.224743086 0.987145741 0.810217245 0.510353047 0.067003252 0.127217283 10.01313981 0.017050539 0.034103924 3.16E-06 5.500303302 -0.176928497 EKEAVIT(ph)PVASATQSVSR ddPTM_A459_MK2206_30min_R1 3 EKEAVITPVASATQSVSR 18 1 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 EKEAVIT(1)PVASATQSVSR;EKEAVIT(0.99)PVAS(0.002)AT(0.002)QS(0.005)VSR;EKEAVIT(0.601)PVAS(0.16)AT(0.093)QS(0.136)VS(0.011)R 115.91 0.014414 64236000 15730.08 16640.47 16732.94 15165.84 17022.67 15018.5 16442.23 15280.56 12335.26 11128.59 TRUE FALSE 14392.15409 15557.17238 15597.15465 16333.91562 16344.62101 15868.83449 15345.39884 15146.96367 13617.55442 12507.28375 1.150701814 1.243849 1.247045719 1.305952272 1.306808204 1.268767449 1.226916983 1.211051415 1.088769928 1 13.61048089 -8.35654314 1.553032148 0.999565725 1.256285288 0.803578258 0.041314549 0.163076432 0.801422913 0.041863712 0.012506156 4.40E-09 8.35654314 0.256719564 EKEAVIT(ph)PVASATQSVSR ddPTM_A459_MK2206_30min_R2 1 EKEAVITPVASATQSVSR 18 1 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 EKEAVIT(0.999)PVASATQSVSR 67.097 0.041743 35681000 101600 153060 134580 144530 171820 152740 152710 111880 140490 133660 TRUE FALSE 109378.5741 145459.263 139066.83 132721.4367 165073.4835 158552.6277 132658.9936 126503.1001 152709.5663 129298.6851 0.84593725 1.124986405 1.075547132 1.026471665 1.276683388 1.22625089 1.025988728 0.97837886 1.181060473 1 16.98034808 -4.758730859 24.98220229 1.104856989 0.845936901 0.393290532 0.095230352 80.270941 740238.3228 0.024776328 0.165707611 1.74E-05 4.758730859 -0.258920088 EKEEPPS(ph)PIEATPPQSLLEK ddPTM_A459_MK2206_30min_R1 2 EKEEPPSPIEATPPQSLLEK 20 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 EKEEPPS(0.962)PIEAT(0.038)PPQSLLEK;EKEEPPS(0.987)PIEAT(0.013)PPQSLLEK 133.17 7.47E-05 7885900 5211.1 6001.3 6047 4428.2 4495 5278.1 5510.5 4392.6 6678.4 7016.4 TRUE FALSE 4767.86858 5610.614279 5636.546488 4769.260731 4315.954632 5576.941461 5142.904599 4354.195961 7372.643579 7885.644603 0.604626358 0.711497228 0.714785762 0.604802901 0.547317924 0.707227087 0.652185694 0.552167411 0.934944947 1 12.94501298 -8.354204291 5.145139201 0.990315742 0.64109974 0.832037274 0.05954938 0.088485894 3.590522743 0.058885355 0.015418958 4.42E-09 8.354204291 -0.349216001 EKEEPPS(ph)PIEATPPQSLLEK ddPTM_A459_MK2206_30min_R2 1 EKEEPPSPIEATPPQSLLEK 20 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 EKEEPPS(1)PIEATPPQSLLEK 95.153 0.0060204 0 20665 14820 18275 18617 13200 9390.6 21178 10798 8047.2 18837 TRUE FALSE 22247.12829 14084.06035 18884.27938 17095.93155 12681.70168 9747.965863 18397.30316 12209.33568 8747.13091 18222.35023 1.220870415 0.772900321 1.036325125 0.938184775 0.695942154 0.534945588 1.009601008 0.670019812 0.480022105 1 14.15342142 -6.190958822 4.60283243 0.719252802 0.985090727 0.310916314 0.190062983 0.281088042 11.50646698 0.055933189 0.07249317 6.44E-07 6.190958822 0.265837925 EKEIS(ph)DDEAEEEK ddPTM_A459_MK2206_30min_R1 5 EKEISDDEAEEEK 13 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK 215.48 5.44E-14 62955000 4717.67 5799.94 5890.5 4828.61 3640.16 2938.26 5347.26 4630.79 8717.14 11466.61 TRUE FALSE 4316.407393 5422.362852 5490.669272 5200.510379 3495.164719 3104.621742 4990.554042 4590.303491 9623.317898 12887.18022 0.33493808 0.420756346 0.426056684 0.403541372 0.271212528 0.240907762 0.387249496 0.356191457 0.746735728 1 13.65364901 -8.43370316 2.553716896 0.997363327 0.352805488 0.929145115 0.059224591 0.067764265 0.916763919 0.063380851 0.017310614 3.68E-09 8.43370316 -0.644557839 down EKEIS(ph)DDEAEEEK ddPTM_A459_MK2206_30min_R2 6 EKEISDDEAEEEK 13 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK 160.64 0.0017275 438087200 849823 424084 554939 363498.2 327299 247409.3 556519 407846.9 256698.4 643878 TRUE FALSE 914886.1023 403024.6052 573440.3893 333799.2343 314447.5967 256824.6343 483447.3868 461153.8902 279025.5628 622868.3136 1.468827491 0.647046248 0.920644664 0.535906591 0.504838005 0.412325734 0.776163077 0.740371408 0.447968787 1 19.24856766 -4.761252479 24.97392122 0.651438791 1.46882838 0.623002941 0.187314109 2.826128578 376640.3822 0.046117687 0.259499092 1.73E-05 4.761252479 0.817389589 EKEIS(ph)DDEAEEEKGEK ddPTM_A459_MK2206_30min_R1 4 EKEISDDEAEEEKGEK 16 2 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK 120.9 0.0017718 195246000 8281.4 12173.4 11861.3 8731.3 4563.98 4935.98 8440.8 7699.9 14762.2 21143.7 TRUE FALSE 7577.023443 11380.90945 11056.188 9403.786239 4382.187012 5215.450922 7877.729633 7632.580586 16296.78352 23763.14118 0.318856139 0.478931188 0.465266268 0.395729932 0.1844111 0.219476494 0.33151045 0.321194093 0.685800896 1 14.53643793 -8.493704545 2.643874695 0.997669259 0.339688416 0.849775926 0.089452036 0.104141431 1.670025655 0.098720004 0.026706874 3.21E-09 8.493704545 -0.657980843 down EKEIS(ph)DDEAEEEKGEK ddPTM_A459_MK2206_30min_R2 2 EKEISDDEAEEEKGEK 16 2 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK 105.67 0.0040999 10759200 50494 27358 33522 19398.3 19744.1 13781.6 34870 24369 13971.7 44920 TRUE FALSE 54359.85946 25999.4415 34639.60675 17813.39684 18968.84743 14306.06845 30291.52711 27554.11197 15186.93321 43454.26408 1.250967209 0.598317382 0.797150924 0.409934381 0.43652442 0.32922128 0.697089866 0.634094549 0.349492358 1 15.40721013 -2.853943207 10.76998176 0.622519719 0.818811902 0 0.285406516 0 0 0.06423903 0 0.00139977 2.853943207 0.196292183 EKELS(ph)PPPGLPSK ddPTM_A459_MK2206_30min_R1 2 EKELSPPPGLPSK 13 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;Q7Z4S6-3;H0YHT2;H0YI78;H0YIM6 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 EKELS(0.983)PPPGLPS(0.017)K;EKELS(0.982)PPPGLPS(0.018)K 78.848 0.022148 317700000 18193.4 20463.2 18400.1 16710.3 15284.4 14144.6 15100.5 15308.2 15681.3 13565.6 TRUE FALSE 16645.95579 19131.04196 17151.15248 17997.3302 14675.58998 14945.45503 14093.1732 15174.36202 17311.42725 15246.20894 1.091809502 1.254806492 1.124945391 1.180446252 0.962573059 0.980273528 0.924372298 0.995287555 1.135457825 1 13.89616293 -6.257684122 24.96953376 0.994691307 1.166841064 0.606929306 0.064293057 213.4294075 1419139.87 0.019342322 0.024014605 5.52E-07 6.257684122 0.172149758 EKELS(ph)PPPGLPSK ddPTM_A459_MK2206_30min_R2 3 EKELSPPPGLPSK 13 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;Q7Z4S6-3;H0YHT2;H0YI78;H0YIM6 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 EKELS(0.994)PPPGLPS(0.006)K;EKELS(1)PPPGLPSK;EKELS(1)PPPGLPSK 86.005 0.014875 178186000 645420 684200 672385 657339 685346 520087 785300 611711 536240 705084 TRUE FALSE 694833.8514 650223.6229 694801.9803 603632.301 658435.8725 539879.2752 682189.1667 691663.728 582881.1859 682077.1668 1.0187027 0.953299208 1.018655973 0.884991216 0.965339267 0.791522281 1.000164204 1.014054951 0.854567803 1 19.37957544 -5.751164392 24.9958652 0.929291659 0.992527287 0.162586074 0.069238812 411.5003707 1001043.312 0.018634604 0.031822658 1.77E-06 5.751164392 0.063235628 EKENGFSS(ph)PPQIK ddPTM_A459_MK2206_30min_R2 1 EKENGFSSPPQIK 13 1 P11387 P11387 TOP1 DNA topoisomerase 1 1 EKENGFS(0.034)S(0.966)PPQIK 66.246 0.040412 4581400 55054 39847 37505 36655 29509 25202 55584 49598 26264 46234 TRUE FALSE 59268.97657 37868.25592 38755.39798 33660.16925 28350.32839 26161.07977 48285.75403 56080.6289 28548.39525 44725.38837 1.325175225 0.846683669 0.866518982 0.752596466 0.633875511 0.584926833 1.079605025 1.253888025 0.638304021 1 15.44880639 -10.01063467 16.10701259 0.999934422 0.88125934 0.018357267 0.245206108 0 0 0.245860889 0.059630024 9.76E-11 10.01063467 -0.118675082 EKEPGEQASVPLS(ph)PK ddPTM_A459_MK2206_30min_R1 3 EKEPGEQASVPLSPK 15 1 P42858 P42858 HTT Huntingtin 1 EKEPGEQASVPLS(1)PK;EKEPGEQASVPLS(1)PK;EKEPGEQAS(0.002)VPLS(0.998)PK 113.23 0.0015467 32764400 20709.6 23172.7 24324.1 21673.8 14514.6 12425 17311.7 18098.2 21099.9 20063.9 TRUE FALSE 18948.13977 21664.15302 22673.04786 23343.11983 13936.45275 13128.49276 16156.86808 17939.96935 23293.31011 22549.56741 0.840288393 0.960734751 1.005475957 1.03519147 0.618036368 0.58220597 0.716504569 0.795579313 1.032982571 1 14.46081214 -6.24701634 24.81967798 0.766510805 0.963663033 0.240043265 0.14386712 986.333938 1697318.133 0.044645215 0.057368034 5.66E-07 6.24701634 0.197152228 EKEPGEQASVPLS(ph)PK ddPTM_A459_MK2206_30min_R2 4 EKEPGEQASVPLSPK 15 1 P42858 P42858 HTT Huntingtin 1 EKEPGEQASVPLS(1)PK;EKEPGEQASVPLS(1)PK;EKEPGEQASVPLS(1)PK;EKEPGEQASVPLS(1)PK 144.68 0.00061136 16570700 184034 155993 158756 114997 160084 101931 183686 130582 133712 173959 TRUE FALSE 198123.7845 148246.6145 164048.8458 105601.3772 153798.2978 105810.0556 159567.8076 147649.5158 145342.0281 168282.7321 1.177326884 0.880937768 0.974840637 0.627523549 0.913927982 0.628763595 0.948212604 0.877389581 0.863677611 1 17.36052762 -4.186545358 1.393312316 0.837511155 2.177030808 0.374239974 0.123536276 5.673299696 3.082995353 0.033635124 16.05476609 6.51E-05 4.186545358 1.339519653 EKEVDGLLTSEPMGS(ph)PVSSK ddPTM_A459_MK2206_30min_R1 13 EKEVDGLLTSEPMGSPVSSK 20 1 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EKEVDGLLTSEPMGS(0.951)PVS(0.037)S(0.013)K;EKEVDGLLTSEPMGS(0.963)PVS(0.031)S(0.006)K;EKEVDGLLTSEPMGS(0.935)PVS(0.052)S(0.013)K;EKEVDGLLTSEPMGS(0.981)PVS(0.015)S(0.004)K;EKEVDGLLTSEPMGS(0.861)PVS(0.109)S(0.03)K;EKEVDGLLTSEPMGS(0.878)PVS(0.092)S(0.03)K;EKEVDGLLTSEPMGS(0.961)PVS(0.029)S(0.009)K;EKEVDGLLTSEPMGS(0.98)PVS(0.016)S(0.004)K;EKEVDGLLTSEPMGS(0.862)PVS(0.109)S(0.029)K;EKEVDGLLTSEPMGS(0.97)PVS(0.022)S(0.008)K;EKEVDGLLTSEPMGS(0.962)PVS(0.029)S(0.009)K;EKEVDGLLTSEPMGS(0.972)PVS(0.021)S(0.007)K;EKEVDGLLTSEPMGS(0.723)PVS(0.118)S(0.159)K 175.83 2.61E-13 949094000 90203.9 91256 91897.8 79946.9 80058.6 76207 81870.4 83014.9 80175.4 73880.8 TRUE FALSE 82531.58463 85315.21781 85660.03338 86104.42409 76869.69644 80521.77448 76408.975 82289.10948 88509.91974 83033.71128 0.993952737 1.027476871 1.031629588 1.03698152 0.925764912 0.969747988 0.920216305 0.991032536 1.065951628 1 16.34140956 -6.22871346 24.97742766 0.974956831 1.023516334 0.222128622 0.039681198 956.4939368 730025.7027 0.012230562 0.015788454 5.91E-07 6.22871346 0.048559503 EKEVDGLLTSEPMGS(ph)PVSSK ddPTM_A459_MK2206_30min_R2 11 EKEVDGLLTSEPMGSPVSSK 20 1 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EKEVDGLLTS(0.003)EPMGS(0.949)PVS(0.035)S(0.012)K;EKEVDGLLTSEPMGS(0.969)PVS(0.023)S(0.008)K;EKEVDGLLTSEPMGS(0.963)PVS(0.027)S(0.01)K;EKEVDGLLTSEPMGS(0.941)PVS(0.048)S(0.011)K;EKEVDGLLTSEPMGS(0.915)PVS(0.036)S(0.049)K;EKEVDGLLTS(0.001)EPMGS(0.86)PVS(0.11)S(0.03)K;EKEVDGLLTSEPMGS(0.899)PVS(0.083)S(0.019)K;EKEVDGLLTSEPMGS(0.895)PVS(0.085)S(0.02)K;EKEVDGLLTSEPMGS(0.949)PVS(0.049)S(0.002)K;EKEVDGLLTSEPMGS(0.853)PVS(0.108)S(0.038)K;EKEVDGLLTSEPMGS(0.958)PVS(0.037)S(0.006)K 171.68 2.63E-09 557805100 1304094 1417712 1353934 1461155 1475129 1113320 1634736 1182753 1190102 1519316 TRUE FALSE 1403936.439 1347310.484 1399073.484 1341773.962 1417208.024 1155688.173 1420093.2 1337342.878 1293614.921 1469740.843 0.955227206 0.916699355 0.95191849 0.91293235 0.964257087 0.786321057 0.966220137 0.909917476 0.880165321 1 20.48713036 EKFEEMIQQIK ddPTM_A459_MK2206_30min_R1 1 EKFEEMIQQIK 11 1 E7ENZ3;B7ZAR1;E9PCA1;P48643-2;P48643 E7ENZ3 CCT5 T-complex protein 1 subunit epsilon 0 121.68 0.012318 5388500 3600.7 3984.2 4048.4 4198.6 3573.4 3505.9 3557.8 3403.3 3321.8 3751.2 FALSE TRUE 3294.441557 3724.827856 3773.605887 4521.976899 3431.063911 3704.401028 3320.465654 3373.545307 3667.112997 4215.926976 0.781427566 0.883513371 0.895083314 1.072593744 0.813833809 0.878668214 0.787600372 0.80019064 0.869823652 1 12.04163416 EKFPEFCSSPS(ph)PPVEVK ddPTM_A459_MK2206_30min_R1 2 EKFPEFCSSPSPPVEVK 17 1 Q68E01-4;Q68E01-3;Q68E01-2;Q68E01 Q68E01-4 INTS3 Integrator complex subunit 3 1 EKFPEFCS(0.01)S(0.044)PS(0.946)PPVEVK;EKFPEFCS(0.002)S(0.099)PS(0.899)PPVEVK 127.92 0.0005801 134310000 10289.9 11824 12378.8 10229.9 9845.1 9379.6 9917.6 10705.6 10528.8 9970.9 TRUE FALSE 9414.689971 11054.25545 11538.56155 11017.80867 9452.94882 9910.664846 9256.015 10612.00207 11623.30644 11206.17037 0.840134467 0.986443637 1.029661442 0.983191252 0.843548555 0.884393555 0.82597486 0.94697847 1.037223784 1 13.45200571 -8.119030759 4.971763776 1.016272777 0.91752524 0.281955739 0.065900631 0.340444242 12.12586965 0.05214318 0.01878943 7.60E-09 8.119030759 -0.098747537 EKFPEFCSSPS(ph)PPVEVK ddPTM_A459_MK2206_30min_R2 4 EKFPEFCSSPSPPVEVK 17 1 Q68E01-4;Q68E01-3;Q68E01-2;Q68E01 Q68E01-4 INTS3 Integrator complex subunit 3 1 EKFPEFCSS(0.002)PS(0.998)PPVEVK;EKFPEFCS(0.006)S(0.068)PS(0.926)PPVEVK;EKFPEFCSS(0.001)PS(0.999)PPVEVK;EKFPEFCSS(0.001)PS(0.999)PPVEVK 171.06 4.21E-07 94152000 341452 368741 342698 366528 350968 276119 390006 291701 260869 380705 TRUE FALSE 367593.8277 350429.8581 354123.3803 336581.4899 337187.2328 286626.902 338797.7437 329827.3223 283558.9141 368282.627 0.998129699 0.951524271 0.961553313 0.913921715 0.915566492 0.778279726 0.919939522 0.895582083 0.7699492 1 18.49045382 -5.981697539 1.545104863 0.869912651 0.974260303 0.287290458 0.064052069 0.475054003 2.295668 0.021133894 0.037149867 1.04E-06 5.981697539 0.104347652 EKGS(ph)ETDSAQDQPVK ddPTM_A459_MK2206_30min_R1 1 EKGSETDSAQDQPVK 15 1 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 EKGS(0.999)ET(0.001)DSAQDQPVK 158.98 0.00067194 5334900 970.13 1208.7 1112.8 1112.3 889.16 856.54 962.04 1062.3 875.1 1059.4 TRUE FALSE 887.6153491 1130.01341 1037.266236 1197.969539 853.7428744 905.0365546 897.8640669 1053.012423 966.0697766 1190.64647 0.745490262 0.949075514 0.87117903 1.006150498 0.717041453 0.760121982 0.754097954 0.884403935 0.811382556 1 10.21752939 -4.70208428 23.00204154 0.851667273 0.74548256 0.106360941 0.097188329 30645.27074 11872322.54 0.024720814 52.27628583 1.99E-05 4.70208428 -0.106184713 EKGS(ph)ETDSAQDQPVK ddPTM_A459_MK2206_30min_R2 1 EKGSETDSAQDQPVK 15 1 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 EKGS(0.683)ET(0.316)DS(0.002)AQDQPVK 86.213 0.010955 8444900 29978 35869 28780 27062 30367 22357 41660 30991 26431 31215 TRUE FALSE 32273.13873 34087.79762 29739.51084 24850.94803 29174.639 23207.8113 36189.99196 35041.63011 28729.9206 30196.45711 1.06877236 1.128867453 0.984867554 0.822975621 0.966160993 0.768560736 1.198484704 1.160455016 0.951433491 1 14.88209167 -9.34324054 11.748894 1.000000021 1.005356055 0.000158974 0.13222306 0 0 0.1365847 0.033126656 4.54E-10 9.34324054 0.005356034 EKGS(ph)PGQNDQELK ddPTM_A459_MK2206_30min_R2 1 EKGSPGQNDQELK 13 1 Q3T7B4;Q9H3H1-6;Q9H3H1-3;Q9H3H1-2;Q9H3H1-5;Q9H3H1-4;Q9H3H1 Q3T7B4 TRIT1 "tRNA dimethylallyltransferase, mitochondrial" 1 EKGS(1)PGQNDQELK 147.83 0.0026716 3322900 13389 14238 13346 10812 13744 9244.1 16566 11838 12288 17826 TRUE FALSE 14414.07213 13530.96162 13790.94898 9928.625014 13204.3415 9595.890703 14390.8643 13385.26725 13356.78803 17244.33908 0.835872692 0.784661074 0.799737752 0.575761412 0.765720358 0.556466134 0.834526869 0.776212251 0.774560739 1 14.07383522 -9.075277078 0.865694889 1.001148381 0.730218092 0.416023476 0.092306296 1.956598104 2.16868526 0.096994277 0.030690724 8.41E-10 9.075277078 -0.270930289 EKGSFS(ph)DTGLGDGK ddPTM_A459_MK2206_30min_R1 1 EKGSFSDTGLGDGK 14 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 EKGS(0.008)FS(0.674)DT(0.318)GLGDGK 158.14 0.0014621 6273100 1271.2 1155.5 1106.3 1389 1080.5 836.65 1259.9 1280 1041.8 1070.5 TRUE FALSE 1163.077765 1080.27674 1031.207438 1495.981021 1037.461397 884.0204 1175.85437 1268.809095 1150.098838 1203.121622 0.966716701 0.897894876 0.857109888 1.243416288 0.862307998 0.734772266 0.977336246 1.054597534 0.955928991 1 10.23256677 -7.513420863 24.8540954 1.006351356 0.927478823 0.073775051 0.12388567 1273.210719 3345862.083 0.058165456 0.035966374 3.07E-08 7.513420863 -0.078872533 EKGSFS(ph)DTGLGDGK ddPTM_A459_MK2206_30min_R2 1 EKGSFSDTGLGDGK 14 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 EKGS(0.005)FS(0.971)DT(0.025)GLGDGK 87.24 0.01227 13155000 46749 48328 52017 59936 55736 41525 65591 41908 38044 67092 TRUE FALSE 50328.13938 45928.1018 53751.22082 55039.03707 53547.52459 43105.26297 56978.82291 47385.51949 41352.99835 64902.79353 0.775438724 0.707644452 0.828180389 0.848022621 0.825041908 0.664151119 0.877910176 0.730099845 0.637152827 1 15.98599296 -10.82051193 3.450652614 1.000853403 0.769469903 0.456870504 0.07646755 98887323.3 161379008.9 909576.996 0.019228664 1.51E-11 10.82051193 -0.2313835 EKGSFSDT(ph)GLGDGK ddPTM_A459_MK2206_30min_R1 1 EKGSFSDTGLGDGK 14 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 EKGS(0.003)FS(0.047)DT(0.949)GLGDGK 129.05 0.011236 8071600 1285.6 1729.5 1549.7 1454.1 1324.1 1022.3 1450.3 1108.4 1349 1269.4 TRUE FALSE 1176.252969 1616.909236 1444.510682 1566.095034 1271.358293 1080.181743 1353.553133 1098.709376 1489.233377 1426.662855 0.824478583 1.133350623 1.012510192 1.097733096 0.891141371 0.757138758 0.948754731 0.770125451 1.04385796 1 10.47842873 -6.294525925 16.69220269 0.8854513 1.025004603 0.188060211 0.113759846 16.12115982 8132.218967 0.033407179 0.037909561 5.08E-07 6.294525925 0.139553303 EKLCYVALDFEQEMATAASSSSLEK ddPTM_A459_MK2206_30min_R1 1 EKLCYVALDFEQEMATAASSSSLEK 25 1 P60709;A0A2R8Y793;Q6S8J3;A0A2R8YEA7;P63261;I3L4N8 P60709;P63261 ACTB;POTEE;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 0 158.8 1.65E-12 7868300 1730.1 1626.9 1792.1 1956.3 2017.2 1623.4 1856.4 1769 1244.8 913.18 FALSE TRUE 1582.94591 1520.988514 1670.457245 2106.974565 1936.850653 1715.315505 1732.562943 1753.53382 1374.201415 1026.311633 1.5423638 1.481994811 1.6276316 2.052957891 1.887195459 1.671339826 1.68814509 1.708578334 1.338970904 1 10.00325315 -8.491938876 2.256653916 1.001313157 1.716590128 0.683406153 0.154957952 0.187232934 2.161182165 0.167538021 0.046202492 3.22E-09 8.491938876 0.715276971 EKLLS(ph)GSESSSK ddPTM_A459_MK2206_30min_R2 1 EKLLSGSESSSK 12 1 Q5BKY9-2;Q5BKY9;G3XAI9 Q5BKY9-2 FAM133B Protein FAM133B 1 EKLLS(0.596)GS(0.368)ES(0.026)S(0.009)S(0.001)K 66.568 0.041196 7196700 38533 48347 43382 38719 53257 32024 54049 38618 33173 51848 TRUE FALSE 41483.11611 45946.15828 44828.33423 35555.53384 51165.86259 33242.69576 46952.30138 43665.5052 36058.32758 50156.20401 0.827078463 0.916061317 0.893774462 0.708896029 1.020130283 0.662783327 0.936121509 0.87059031 0.718920586 1 15.61414054 -10.73793952 4.351747222 1.00005766 0.843277238 0.167349228 0.107169908 5.80E-05 1.05E-05 0.09623303 0.023330992 1.83E-11 10.73793952 -0.156780422 EKLQEEGGGS(ph)DEEET(ph)GSPSEDGMQSAR ddPTM_A459_MK2206_30min_R2 1 EKLQEEGGGSDEEETGSPSEDGMQSAR 27 1 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 2 EKLQEEGGGS(1)DEEET(0.82)GS(0.143)PS(0.036)EDGMQSAR 102.56 1.91E-06 7242000 38837 45480 42859 46605 52543 42468 50035 37376 40792 42707 TRUE FALSE 41810.39058 43221.52933 44287.89767 42797.22242 50479.89781 44084.1495 43465.3444 42261.17153 44340.01442 41313.47409 1.012027952 1.046184817 1.071996453 1.035914393 1.221874919 1.067064692 1.052086404 1.022939185 1.073257948 1 15.33432476 -10.37504638 7.717280242 1 1.068473563 0.116094834 0.055366213 1.60E-10 5.11E-19 0.05566596 0.013500978 4.22E-11 10.37504638 0.068473563 EKLQEEGGGS(ph)DEEETGSPSEDGMQSAR ddPTM_A459_MK2206_30min_R1 10 EKLQEEGGGSDEEETGSPSEDGMQSAR 27 1 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 1 EKLQEEGGGS(0.948)DEEET(0.048)GS(0.003)PS(0.001)EDGMQSAR;EKLQEEGGGS(0.973)DEEET(0.02)GS(0.003)PS(0.003)EDGMQSAR;EKLQEEGGGS(0.812)DEEET(0.175)GS(0.01)PS(0.004)EDGMQSAR;EKLQEEGGGS(0.996)DEEET(0.003)GS(0.001)PSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(0.999)DEEET(0.001)GSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR 145.16 7.04E-14 290921700 24199.7 20588.18 20734.8 19171.66 33440.09 32785.74 28710.62 24113.33 16387.84 14274.35 TRUE FALSE 22141.38844 19247.88574 19327.37955 20648.26458 32108.1004 34642.04027 26795.38693 23902.5097 18091.41461 16042.76424 1.380147966 1.199786112 1.204741231 1.287076483 2.001406984 2.159356065 1.670247503 1.489924637 1.127699338 1 13.96963513 -6.044821567 22.72002709 1.63426926 1.253802227 0.155572571 0.333591759 247.0575919 125232.6763 0.103628407 0.133797391 9.02E-07 6.044821567 -0.380467033 EKLQEEGGGS(ph)DEEETGSPSEDGMQSAR ddPTM_A459_MK2206_30min_R2 9 EKLQEEGGGSDEEETGSPSEDGMQSAR 27 1 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 1 EKLQEEGGGS(0.966)DEEET(0.018)GS(0.008)PS(0.008)EDGMQSAR;EKLQEEGGGS(0.691)DEEET(0.211)GS(0.073)PS(0.024)EDGMQS(0.001)AR;EKLQEEGGGS(0.992)DEEET(0.006)GS(0.001)PS(0.001)EDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR 142.23 7.96E-13 521713600 234163 304807 288742 317202 315485 253530 324178 245852 257024 285974 TRUE FALSE 252090.6993 289670.7276 298368.5142 291285.5819 303097.4737 263178.2618 281613.0392 277985.7005 279379.4829 276642.6918 0.911250168 1.047093367 1.078533874 1.052930696 1.09562798 0.951329168 1.017966668 1.004854669 1.009892873 1 18.07766429 -6.767818052 24.99994191 0.998434481 1.040825899 0.141134156 0.049169328 315.4770311 1236445.519 0.017472333 0.015776171 1.71E-07 6.767818052 0.042391419 EKLQEEGGGSDEEET(ph)GSPSEDGMQSAR ddPTM_A459_MK2206_30min_R1 1 EKLQEEGGGSDEEETGSPSEDGMQSAR 27 1 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 1 EKLQEEGGGS(0.001)DEEET(0.865)GS(0.107)PS(0.026)EDGMQS(0.001)AR 93.392 1.48E-05 20364000 3328.5 4251.5 4702.6 3928.9 3781.2 3241.1 3724.3 3709.1 3098.7 2358.5 TRUE FALSE 3045.393596 3974.726577 4383.400614 4231.504559 3630.586797 3424.608281 3475.858742 3676.67173 3420.820954 2650.688786 1.148906508 1.499507071 1.653683615 1.596379244 1.369676748 1.291969204 1.311303975 1.38706277 1.290540395 1 11.37215158 -6.512522642 4.412446285 1.286325823 1.489760449 0.288460357 0.157389381 0.288962515 13.97477846 0.052587655 0.056168014 3.07E-07 6.512522642 0.203434627 EKLQEEGGGSDEEET(ph)GSPSEDGMQSAR ddPTM_A459_MK2206_30min_R2 1 EKLQEEGGGSDEEETGSPSEDGMQSAR 27 1 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 1 EKLQEEGGGS(0.019)DEEET(0.636)GS(0.263)PS(0.079)EDGMQS(0.004)AR 65.817 0.0019292 44384000 27246 34255 26822 34184 34149 24727 29876 26237 25602 28053 TRUE FALSE 29331.97471 32553.94651 27716.23209 31391.05785 32808.13868 25668.00331 25953.24531 29666.26599 27828.81568 27137.63291 1.080859735 1.199586811 1.021320916 1.156735297 1.208953588 0.945845328 0.956356267 1.0931781 1.025469531 1 14.72800727 -6.765782183 24.99999998 1.007005129 1.132222893 0.51024085 0.063313056 100.0293434 575828.9612 0.022473936 0.020501993 1.71E-07 6.765782183 0.125217763 EKLQSFDS(ph)PER ddPTM_A459_MK2206_30min_R1 2 EKLQSFDSPER 11 1 E9PGM9;P78332;P78332-2 E9PGM9 RBM6 RNA-binding protein 6 1 EKLQS(0.003)FDS(0.997)PER;EKLQSFDS(1)PER 127.78 0.013778 26263700 11420.5 11506.6 10952.8 10536 12003.3 10826.5 10663.4 11281.9 9646.7 8314 TRUE FALSE 10449.1265 10757.51825 10209.35445 11347.48455 11525.18314 11439.48707 9952.064042 11183.26354 10649.50899 9344.001087 1.118271114 1.151275364 1.09261058 1.214413873 1.233431272 1.224260032 1.065075223 1.196838852 1.139716154 1 13.18982473 -8.565184191 18.53012032 0.999999998 1.162692213 0.444482124 0.054018353 554.8869864 243045.967 0.054243306 0.014005561 2.72E-09 8.565184191 0.162692215 EKLQSFDS(ph)PER ddPTM_A459_MK2206_30min_R2 2 EKLQSFDSPER 11 1 E9PGM9;P78332;P78332-2 E9PGM9 RBM6 RNA-binding protein 6 1 EKLQS(0.004)FDS(0.996)PER;EKLQS(0.001)FDS(0.999)PER 113.52 0.0038765 43792000 115922 139288 124508 135611 124862 122759 136554 107129 107811 117689 TRUE FALSE 124797.0774 132371.1605 128659.0346 124531.1475 119959.2905 127430.6798 118624.2958 121131.1281 117188.2059 113848.8176 1.096164898 1.162692449 1.1300867 1.093829081 1.053671817 1.11929735 1.041945787 1.063964745 1.029331779 1 16.79675978 -7.118939827 0.31830746 0.994659955 1.154484417 0.69669959 0.026239774 1.026263462 0.257183724 0.036240795 0.059158647 7.60E-08 7.118939827 0.159824462 EKPCVS(ph)PTVGEK ddPTM_A459_MK2206_30min_R1 1 EKPCVSPTVGEK 12 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 EKPCVS(0.612)PT(0.388)VGEK 127.71 0.012172 0 1302.6 1454.7 1815.1 1158.1 1033.7 1057.9 1319.9 1245.7 1097.3 951.7 TRUE FALSE 1191.80703 1359.998766 1691.896069 1247.297063 992.5255401 1117.797384 1231.851879 1234.808976 1211.368262 1069.603781 1.114250951 1.271497717 1.581797016 1.166130005 0.927937576 1.045057435 1.151689907 1.154454573 1.132539248 1 10.06286076 -5.989872863 24.98134331 1.076377515 1.326838525 0.450354788 0.125311981 198.8175234 490432.5564 0.03667663 0.054334855 1.02E-06 5.989872863 0.25046101 EKPCVSPT(ph)VGEK ddPTM_A459_MK2206_30min_R1 1 EKPCVSPTVGEK 12 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 EKPCVS(0.029)PT(0.971)VGEK 133.48 0.017993 7513800 1265.3 1230.7 1759.5 1182 1336 1122.8 1231.9 971.25 1329.2 1307.8 TRUE FALSE 1157.679591 1150.581206 1640.070042 1273.037845 1282.784291 1186.371966 1149.722199 962.7584636 1467.375097 1469.820137 0.787633508 0.782804084 1.115830434 0.866118114 0.87274916 0.807154519 0.782219654 0.655017875 0.998336503 1 10.52142391 -6.561585507 3.230351725 0.823130993 0.895260486 0 0.128848927 0.81633401 17.59520007 0.044632822 0.046279669 2.74E-07 6.561585507 0.072129493 EKPCVSPT(ph)VGEK ddPTM_A459_MK2206_30min_R2 1 EKPCVSPTVGEK 12 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 EKPCVS(0.022)PT(0.978)VGEK 153.7 0.0047873 8997400 20828 19377 24209 23401 22291 14745 28494 18138 18442 20729 TRUE FALSE 22422.60769 18414.76636 25016.11598 21489.06344 21415.74334 15306.13131 24752.70357 20508.69888 20046.05182 20052.61443 1.118188742 0.918322467 1.247523911 1.071634002 1.067977615 0.76329854 1.234387848 1.022744388 0.999672731 1 14.29150272 -6.543904614 24.99593486 1.00826222 1.085779233 0.089975539 0.129207335 685.7439079 815218.8675 0.042294289 0.042298598 2.86E-07 6.543904614 0.077517014 EKPDS(ph)DDDLDIASLVTAK ddPTM_A459_MK2206_30min_R1 4 EKPDSDDDLDIASLVTAK 18 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 EKPDS(1)DDDLDIASLVTAK;EKPDS(1)DDDLDIASLVTAK;EKPDS(1)DDDLDIASLVTAK;EKPDS(0.969)DDDLDIAS(0.029)LVT(0.002)AK 110.14 0.0007692 53090000 30622.7 41369.8 41123.5 36919.7 23974.2 22059.3 28764.9 31426.2 34812.8 32758.2 TRUE FALSE 28018.07856 38676.6185 38332.1514 39763.26169 23019.25685 23308.2785 26846.04601 31151.44405 38431.71514 36816.53313 0.761018928 1.0505231 1.041166784 1.080038187 0.625242381 0.633092704 0.729184519 0.846126493 1.043871106 1 15.16806616 -6.246941398 24.97877536 0.792047759 0.992137919 0.221979713 0.152833671 1121.11765 1931588.894 0.047216799 0.060674045 5.66E-07 6.246941398 0.20009016 EKPDS(ph)DDDLDIASLVTAK ddPTM_A459_MK2206_30min_R2 8 EKPDSDDDLDIASLVTAK 18 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 EKPDS(1)DDDLDIASLVTAK;EKPDS(0.988)DDDLDIAS(0.011)LVT(0.001)AK;EKPDS(0.997)DDDLDIAS(0.003)LVTAK;EKPDS(1)DDDLDIASLVTAK;EKPDS(1)DDDLDIASLVTAK;EKPDS(1)DDDLDIASLVTAK;EKPDS(1)DDDLDIASLVTAK;EKPDS(0.998)DDDLDIAS(0.002)LVTAK 152.96 0.00019947 32496900 504627 484679 508291 406122 435849 295619 526003 424595 353717 566057 TRUE FALSE 543261.6311 460610.5456 525237.1682 372940.5335 418735.3783 306868.9882 456938.1743 480091.0244 384482.6653 547586.6064 0.992101751 0.84116474 0.959185565 0.68106219 0.764692513 0.560402655 0.834458274 0.876739896 0.702140375 1 19.06272763 -5.751630879 24.99893514 0.762282541 0.92185212 0.266091894 0.117742865 268.0801542 683249.4312 0.031422266 0.05358156 1.77E-06 5.751630879 0.15956958 EKPELSEPSHLNGPS(ph)SDPEAAFLSR ddPTM_A459_MK2206_30min_R2 1 EKPELSEPSHLNGPSSDPEAAFLSR 25 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 EKPELSEPSHLNGPS(0.5)S(0.5)DPEAAFLSR 63.462 0.0017527 57427000 8725.7 12306 12073 14921 14276 15144 15587 8491.6 12950 12214 TRUE FALSE 9393.746301 11694.90193 12475.50779 13701.90657 13715.45251 15720.31553 13540.40818 9601.481276 14076.36759 11815.45818 0.795038682 0.989796735 1.055863226 1.159659351 1.16080581 1.330487171 1.145990953 0.812620309 1.191351819 1 13.52838795 -4.776877336 1.507624818 1.117017208 0.668114823 0.363956366 0.128021393 1.328659116 2.798133728 0.038739144 0.903056675 1.67E-05 4.776877336 -0.448902384 EKPELSEPSHLNGPSS(ph)DPEAAFLSR ddPTM_A459_MK2206_30min_R1 4 EKPELSEPSHLNGPSSDPEAAFLSR 25 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 EKPELSEPSHLNGPS(0.019)S(0.981)DPEAAFLSR;EKPELSEPSHLNGPS(0.086)S(0.914)DPEAAFLSR;EKPELSEPSHLNGPS(0.074)S(0.926)DPEAAFLSR;EKPELSEPSHLNGPS(0.022)S(0.978)DPEAAFLSR 175.64 1.13E-20 193373000 18186.1 14265.5 15114.7 11340.8 19121.3 18861.6 20640.3 15796.9 15643.8 16341.9 TRUE FALSE 16639.2767 13336.81336 14088.75628 12214.27038 18359.65813 19929.52749 19263.42325 15658.78937 17270.02899 18366.45795 0.905960025 0.72615054 0.767091636 0.665031353 0.99962977 1.085104572 1.048837141 0.852575353 0.940302645 1 14.1647858 -6.275650286 24.90083743 0.98829329 0.763281633 0.643126917 0.080888497 499.9935691 876103.8948 0.026632832 0.030339588 5.30E-07 6.275650286 -0.225011657 EKPELSEPSHLNGPSS(ph)DPEAAFLSR ddPTM_A459_MK2206_30min_R2 8 EKPELSEPSHLNGPSSDPEAAFLSR 25 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 EKPELSEPSHLNGPS(0.368)S(0.631)DPEAAFLS(0.001)R;EKPELSEPS(0.001)HLNGPS(0.297)S(0.668)DPEAAFLS(0.034)R;EKPELSEPSHLNGPS(0.319)S(0.681)DPEAAFLSR;EKPELSEPSHLNGPS(0.235)S(0.764)DPEAAFLSR;EKPELSEPSHLNGPS(0.071)S(0.929)DPEAAFLSR;EKPELS(0.001)EPS(0.002)HLNGPS(0.399)S(0.537)DPEAAFLS(0.061)R;EKPELSEPSHLNGPS(0.208)S(0.792)DPEAAFLSR;EKPELSEPSHLNGPS(0.347)S(0.651)DPEAAFLS(0.001)R 114.57 4.39E-08 359505900 233988 288682 256411 357164 291031 297434 347312 269337 251768 290936 TRUE FALSE 251902.3012 274346.4717 264959.6148 327982.5587 279603.6606 308753.0593 301709.5172 304540.2707 273666.3255 281442.7821 0.895039124 0.974785957 0.941433327 1.165361414 0.99346538 1.097036694 1.072010143 1.08206815 0.972369316 1 18.10248212 -5.672888007 15.75280252 1.057976557 0.940754618 0.474962227 0.0565105 1.153501325 202.5693985 0.014414662 0.024967165 2.12E-06 5.672888007 -0.11722194 EKPLALYMFSSNDK ddPTM_A459_MK2206_30min_R1 2 EKPLALYMFSSNDK 14 1 P30838;A8MYB8;C9JMC5;I3L3I9;E9PNN6 P30838 ALDH3A1 "Aldehyde dehydrogenase, dimeric NADP-preferring" 0 ; 115.26 0.0079558 17689400 7853.8 7994.7 8054.4 8353.4 8692.9 7934.5 8116.6 8369.4 7066 6927.2 FALSE TRUE 7185.793068 7474.243577 7507.689769 8996.780315 8346.643385 8383.744533 7575.156424 8296.227218 7800.535986 7785.393834 0.922983888 0.960034102 0.96433012 1.155597328 1.072090066 1.076855547 0.972995918 1.065614328 1.001944944 1 12.92655431 -5.550649898 24.99946911 1.051645332 0.946677215 0.4693611 0.049109645 175.4667226 157953.5537 0.013566929 0.023499197 2.81E-06 5.550649898 -0.104968117 EKPYFPIPEEYTFIQNVPLEDR ddPTM_A459_MK2206_30min_R1 1 EKPYFPIPEEYTFIQNVPLEDR 22 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;A0A1X7SBS1;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 108.5 0.00015457 21542000 5315.9 6025.8 5478.5 5707.4 6558.1 6471.6 6578.6 5502.6 5097.3 4715.4 FALSE TRUE 4863.75479 5633.519325 5106.634684 6146.984937 6296.87699 6838.016399 6139.753597 5454.491348 5627.182576 5299.579351 0.917762424 1.063012543 0.963592456 1.159900537 1.188184302 1.290294181 1.158536025 1.029230999 1.061816835 1 12.37166214 -5.762575221 24.99972823 1.1387556 0.989611462 0.366609888 0.086394934 33.34331673 733911.2045 0.025621585 0.040543665 1.73E-06 5.762575221 -0.149144138 EKQEASES(ph)PVK ddPTM_A459_MK2206_30min_R1 2 EKQEASESPVK 11 1 Q01167-2;Q01167;E9PPI7;Q01167-3 Q01167-2 FOXK2 Forkhead box protein K2 1 EKQEAS(0.033)ES(0.967)PVK;EKQEAS(0.004)ES(0.996)PVK 153 0.0026979 39922000 3972.1 4746.1 4051.3 3615.12 2496.31 2516.93 3776.91 4088.5 1260.01 3573.41 TRUE FALSE 3634.252037 4437.128027 3776.309044 3893.557169 2396.876687 2659.436402 3524.959225 4052.754676 1390.992548 4016.111009 0.904918223 1.104832017 0.940290006 0.969484449 0.596815347 0.662191955 0.87770463 1.009124167 0.346353113 1 11.97158343 -6.14629976 7.609771566 0.751581084 0.988498959 0.260938704 0.190537946 0.383843269 23.00461169 0.055105338 0.07135338 7.14E-07 6.14629976 0.236917875 EKQEASES(ph)PVK ddPTM_A459_MK2206_30min_R2 5 EKQEASESPVK 11 1 Q01167-2;Q01167;E9PPI7;Q01167-3 Q01167-2 FOXK2 Forkhead box protein K2 1 EKQEAS(0.087)ES(0.913)PVK;EKQEAS(0.001)ES(0.999)PVK;EKQEAS(0.027)ES(0.973)PVK;EKQEAS(0.009)ES(0.991)PVK;EKQEAS(0.001)ES(0.999)PVK 153.32 0.002671 238800000 228058 214262 219806 192741 199075 141951.7 235413 194558 137706.1 238004 TRUE FALSE 245518.2958 203622.0606 227134.2223 176993.4438 191258.3152 147353.7714 204502.9903 219987.3986 149683.5277 230237.949 1.066367629 0.884398343 0.986519483 0.768741402 0.830698484 0.640006446 0.888224514 0.95547845 0.650125352 1 17.81276612 -4.90755565 1.004050886 0.816622922 1.126156047 0.258980097 0.118605392 2.207060887 2.058691687 0.038949161 0.706307816 1.24E-05 4.90755565 0.309533125 EKQES(ph)Y(ph)T(ph)FY(ph)VK ddPTM_A459_MK2206_30min_R1 1 EKQESYTFYVK 11 1 Q9BZA7-7;Q9BZA7-2;Q9BZA8-3;Q9BZA8-2;Q9BZA8-4;Q9BZA7-6;Q9BZA7-5;Q9BZA7-4;Q9BZA7-3;Q9BZA7-8;Q9BZA8;Q9BZA7 Q9BZA7-7 PCDH11X;PCDH11Y Protocadherin-11 X-linked;Protocadherin-11 Y-linked 4 EKQES(1)Y(1)T(1)FY(1)VK 84.615 0.013883 21484000 4729.3 1179.5 814.06 658.48 7122.9 6962 7430.7 3743.9 1269.3 1218.8 TRUE FALSE 4327.0482 1102.714336 758.8038753 709.1962437 6839.17981 7356.182424 6935.011561 3711.167477 1401.248277 1369.794145 3.158903996 0.805021937 0.553954678 0.517739287 4.992852271 5.370283154 5.062812966 2.709288464 1.022962671 1 10.41974338 -6.251153882 24.90319056 3.630849176 1.176131105 0.277233262 1.624580359 827.3634287 2003206.824 0.508202014 0.648565978 5.61E-07 6.251153882 -2.454718071 EKQES(ph)Y(ph)T(ph)FY(ph)VK ddPTM_A459_MK2206_30min_R2 1 EKQESYTFYVK 11 1 Q9BZA7-7;Q9BZA7-2;Q9BZA8-3;Q9BZA8-2;Q9BZA8-4;Q9BZA7-6;Q9BZA7-5;Q9BZA7-4;Q9BZA7-3;Q9BZA7-8;Q9BZA8;Q9BZA7 Q9BZA7-7 PCDH11X;PCDH11Y Protocadherin-11 X-linked;Protocadherin-11 Y-linked 4 EKQES(1)Y(1)T(1)FY(1)VK 67.879 0.029166 57201000 17311 48626 32573 82736 60046 103650 42965 39468 70092 19914 TRUE FALSE 18636.34347 46211.30355 33658.96756 75976.20414 57688.29233 107594.4734 37323.64389 44626.60311 76188.47546 19264.20781 0.967407726 2.398816707 1.747228222 3.943904929 2.9945842 5.585201034 1.937460614 2.316555321 3.954923878 1 14.23363524 -5.742540561 24.80837789 3.209653742 1.773916472 0.210206763 1.229811859 341.5000263 448281.3137 0.326989633 0.565119884 1.81E-06 5.742540561 -1.43573727 EKQS(ph)DDEVYAPGLDIESSLK ddPTM_A459_MK2206_30min_R1 1 EKQSDDEVYAPGLDIESSLK 20 1 Q15459;Q15459-2 Q15459 SF3A1 Splicing factor 3A subunit 1 1 EKQS(0.997)DDEVY(0.003)APGLDIESSLK 106.88 0.0023931 0 2827.1 3242.7 4006.7 3244.4 2208.1 1792.5 2389.1 3055.5 3078.9 2940.3 TRUE FALSE 2586.640299 3031.599641 3734.736367 3494.28425 2120.146701 1893.989801 2229.727498 3028.786086 3398.962673 3304.566562 0.782747223 0.917397058 1.13017435 1.057410763 0.641580873 0.573143184 0.674741288 0.916545643 1.028565353 1 11.69024534 -6.249648376 24.87485841 0.783407953 0.979339972 0.188069188 0.164986747 1143.925785 2413278.771 0.053402618 0.068364154 5.63E-07 6.249648376 0.195932019 EKS(ph)PVREPVDNLSPEER ddPTM_A459_MK2206_30min_R1 2 EKSPVREPVDNLSPEER 17 2 Q86U06-3;Q86U06-5;Q86U06-2;Q86U06 Q86U06-3 RBM23 Probable RNA-binding protein 23 1 EKS(0.989)PVREPVDNLS(0.011)PEER;EKS(0.546)PVREPVDNLS(0.454)PEER 97.767 0.0061709 58700000 4609.3 4786.4 5067.6 4266.5 4445.6 3911.1 4777.1 4462.4 4189.4 4216.7 TRUE FALSE 4217.254831 4474.80449 4723.625431 4595.106569 4268.522338 4132.543102 4458.428375 4423.385707 4624.903122 4739.09663 0.889885807 0.944231536 0.996735412 0.969616559 0.900703799 0.872010728 0.940776001 0.933381624 0.97590395 1 12.21039636 -8.404730301 2.54296404 0.999686295 0.931784624 0.309931438 0.034920772 0.375770748 4.84593327 0.036997711 0.010152337 3.94E-09 8.404730301 -0.067901672 EKS(ph)PVREPVDNLSPEER ddPTM_A459_MK2206_30min_R2 2 EKSPVREPVDNLSPEER 17 2 Q86U06-3;Q86U06-5;Q86U06-2;Q86U06 Q86U06-3 RBM23 Probable RNA-binding protein 23 1 EKS(1)PVREPVDNLSPEER;EKS(0.999)PVREPVDNLS(0.001)PEER 61.136 0.022449 61205000 50580 57872 60942 55919 56891 44773 60619 48396 49879 60493 TRUE FALSE 54452.44369 54998.16063 62973.77586 51350.23882 54657.17349 46476.86789 52659.65248 54721.52337 54217.38526 58519.11836 0.930506905 0.939832352 1.076123114 0.877495086 0.934005416 0.794216816 0.899870913 0.935105055 0.926490125 1 15.83662041 -5.832569707 24.99999976 0.902697717 0.977941454 0.220032975 0.06149611 63.32423378 22255.03929 0.017311749 0.025677484 1.47E-06 5.832569707 0.075243737 EKS(ph)QDEVLRDDPPK ddPTM_A459_MK2206_30min_R2 1 EKSQDEVLRDDPPK 14 2 Q2TBE0;H0YE03;H7C3G7;Q2TBE0-3;Q2TBE0-2 Q2TBE0 CWF19L2 CWF19-like protein 2 1 EKS(1)QDEVLRDDPPK 80.411 0.038466 1572300 9447.3 10223 9468.9 9266.4 9891.5 8748.6 12097 8048.7 8066.5 10684 TRUE FALSE 10170.59255 9715.340686 9784.5884 8509.305478 9503.110009 9081.534103 10508.64937 9100.692725 8768.109589 10335.38195 0.984055799 0.9400079 0.946707963 0.823317949 0.919473518 0.878683937 1.016764491 0.880537629 0.848358544 1 13.33530409 -5.075332392 1.978342319 0.908547114 0.98215278 0.118480143 0.058317973 0.925798308 5.83621709 0.015991385 0.099898419 8.41E-06 5.075332392 0.073605666 EKSPVREPVDNLS(ph)PEER ddPTM_A459_MK2206_30min_R2 1 EKSPVREPVDNLSPEER 17 2 Q86U06-3;Q86U06-5;Q86U06-2;Q86U06 Q86U06-3 RBM23 Probable RNA-binding protein 23 1 EKS(0.011)PVREPVDNLS(0.989)PEER 68.944 0.040027 12506000 29234 36794 33325 27712 36775 31183 35753 23408 30213 29408 TRUE FALSE 31472.17752 34966.86346 34436.03887 25447.84095 35331.02872 32369.69092 31058.58815 26467.50597 32840.87213 28448.41937 1.106289144 1.229132031 1.210472836 0.894525654 1.241932926 1.137837941 1.091750925 0.930368244 1.154400591 1 14.79606088 -6.618036395 0.230358779 0.986722525 1.22598325 0.137561224 0.107709011 8.796855058 0.979476263 0.243288725 0.656485364 2.41E-07 6.618036395 0.239260725 EKT(ph)DS(ph)LT(ph)T(ph)SPILSRLQGTSK ddPTM_A459_MK2206_30min_R2 1 EKTDSLTTSPILSRLQGTSK 20 2 Q9ULD6-4;Q9ULD6 Q9ULD6-4 INTU Protein inturned 4 EKT(0.997)DS(0.997)LT(0.982)T(0.936)S(0.08)PILS(0.002)RLQGT(0.005)S(0.001)K 56.424 0.014995 16778000 76779 120140 94064 108270 109120 108170 95588 83665 96102 87285 TRUE FALSE 82657.25927 114174.0223 97200.04681 99423.99466 104835.4005 112286.4851 83037.18078 94600.30276 104460.7782 84436.8976 0.978923452 1.352181636 1.151156065 1.177494644 1.241582809 1.329827224 0.983422925 1.120366871 1.237146096 1 16.36558595 -10.51377969 0.351852596 0.916572401 1.193857233 0.151344775 0.12005216 26.3555289 2.489351485 2.349812384 0.096419498 3.06E-11 10.51377969 0.277284832 EKT(ph)PELPEPSVK ddPTM_A459_MK2206_30min_R1 3 EKTPELPEPSVK 12 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 EKT(1)PELPEPSVK;EKT(1)PELPEPSVK;EKT(0.991)PELPEPS(0.009)VK 159.41 0.0027704 1124710000 28359.3 33873 33939.9 29996 20513.5 17862.2 23273.1 26633.7 27559.4 26486.9 TRUE FALSE 25947.19261 31667.86154 31636.15415 32306.29712 19696.40386 18873.54233 21720.59396 26400.84437 30424.29825 29768.29714 0.871638458 1.063811658 1.062746519 1.085258487 0.661657056 0.634014846 0.729655239 0.886877884 1.022036904 1 14.86148908 -6.24797657 24.95811487 0.802663685 1.026923118 0.34096416 0.133406987 869.0661749 1611123.469 0.042083063 0.054008266 5.65E-07 6.24797657 0.224259433 EKT(ph)PELPEPSVK ddPTM_A459_MK2206_30min_R2 3 EKTPELPEPSVK 12 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 EKT(1)PELPEPSVK;EKT(1)PELPEPSVK;EKT(1)PELPEPSVK 166.64 0.0047869 1192557000 320004 314552 289134 282759 301005 155910 334611 259006 205302 364794 TRUE FALSE 344503.7523 298931.8051 298773.5833 259656.6852 289186.0313 161843.2643 290676.1738 292858.9735 223158.7969 352890.8017 0.976233301 0.847094352 0.846645993 0.735798961 0.819477385 0.458621374 0.823700058 0.82988554 0.632373516 1 18.4288623 -4.970547193 1.069883134 0.742321021 1.031351355 0.187466129 0.135497595 2.09322492 2.44234705 0.043255038 0.640575785 1.07E-05 4.970547193 0.289030334 EKTATCHSSS(ph)SPPIDAASAEPYGFR ddPTM_A459_MK2206_30min_R1 3 EKTATCHSSSSPPIDAASAEPYGFR 25 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EKTATCHSS(0.01)S(0.956)S(0.034)PPIDAASAEPYGFR;EKTATCHSS(0.007)S(0.83)S(0.163)PPIDAASAEPYGFR;EKTATCHS(0.002)S(0.055)S(0.471)S(0.471)PPIDAAS(0.001)AEPYGFR 189.11 7.83E-27 18921600 4779.7 2464.06 3208.9 2821.75 7846.3 5884.6 4819.22 4560.75 2571.91 1878.65 TRUE FALSE 4373.161416 2303.649246 2991.088809 3039.081674 7533.765256 6217.780967 4497.738627 4520.875844 2839.269248 2111.391345 2.071222574 1.091057445 1.416643492 1.439373937 3.568152003 2.944873759 2.130224999 2.141183279 1.344738508 1 11.04397829 EKTATCHSSSS(ph)PPIDAASAEPYGFR ddPTM_A459_MK2206_30min_R2 1 EKTATCHSSSSPPIDAASAEPYGFR 25 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EKT(0.039)AT(0.039)CHS(0.061)S(0.157)S(0.278)S(0.425)PPIDAASAEPYGFR 42.851 0.035534 20053000 3022.2 13676 7796 22255 19542 30199 20994 10557 19932 10620 TRUE FALSE 3253.581956 12996.86973 8055.914749 20436.69531 18774.68289 31348.24411 18237.46258 11936.83615 21665.64933 10273.47027 0.316697462 1.265090508 0.784147375 1.98926894 1.827491821 3.051378286 1.775199821 1.161908862 2.10889298 1 13.32663597 -5.760167034 24.99099452 1.898266775 0.836289426 0.419256463 0.566404184 32.82285397 644665.5627 0.158637229 0.256457821 1.74E-06 5.760167034 -1.061977349 EKTMS(ph)SDDEDCSAK ddPTM_A459_MK2206_30min_R1 1 EKTMSSDDEDCSAK 14 1 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 EKT(0.003)MS(0.844)S(0.153)DDEDCSAK 156.72 0.0015131 2956800 1201.4 1379.2 1310.3 1306.6 1111.4 1113.9 1111.2 1133.2 957.24 964.96 TRUE FALSE 1099.214621 1289.413829 1221.360487 1407.234558 1067.130585 1176.968055 1037.073875 1123.292552 1056.748524 1084.50653 1.013562013 1.188940586 1.126190072 1.297580531 0.983978017 1.085256772 0.956263376 1.035763751 0.974404943 1 10.08282302 -6.298115022 24.9992763 1.009214201 1.156710799 0.503961848 0.073164706 476.4936022 324791.8131 0.021934272 0.02487181 5.03E-07 6.298115022 0.147496598 EKTMSS(ph)DDEDCSAK ddPTM_A459_MK2206_30min_R2 1 EKTMSSDDEDCSAK 14 1 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 EKT(0.001)MS(0.049)S(0.947)DDEDCS(0.003)AK 82.01 0.0169 8093800 48417 66875 58050 56157 65988 38915 64023 48293 50209 61764 TRUE FALSE 52123.84275 63554.08475 59985.35803 51568.79346 63396.97956 40395.93759 55616.70319 54605.06091 54576.08806 59748.64574 0.872385342 1.063690799 1.003961802 0.863095604 1.061061364 0.676097962 0.930844582 0.913912947 0.913428035 1 15.86661839 EKTPSPKEEDEEPES(ph)PPEK ddPTM_A459_MK2206_30min_R1 2 EKTPSPKEEDEEPESPPEK 19 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EKTPSPKEEDEEPES(1)PPEK;EKTPSPKEEDEEPES(1)PPEK 113.59 0.00059275 77134000 10837.8 13278.7 13959.5 13183.3 7491.9 7583.1 8756.3 9398.8 10344.9 8289.1 TRUE FALSE 9915.988198 12414.25422 13011.96803 14198.68005 7193.481759 8012.448569 8172.183204 9316.627283 11420.28937 9316.016288 1.064402196 1.332571116 1.396730924 1.524114988 0.772162858 0.860072409 0.877218647 1.000065585 1.225876922 1 13.18549745 -6.26275129 24.99993326 0.947177295 1.334482837 0.582992035 0.154646334 88.15645877 1679918.028 0.049756666 0.059558893 5.46E-07 6.26275129 0.387305543 EKTPSPKEEDEEPES(ph)PPEK ddPTM_A459_MK2206_30min_R2 2 EKTPSPKEEDEEPESPPEK 19 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EKTPSPKEEDEEPES(1)PPEK;EKT(0.007)PS(0.023)PKEEDEEPES(0.971)PPEK 91.565 0.0027625 96342000 55832 72062 60599 60500 71569 38545 78756 51124 47028 77737 TRUE FALSE 60106.54085 68483.50587 62619.34041 55556.95647 68758.84145 40011.85698 68415.2426 57806.08233 51118.41043 75200.44806 0.799284345 0.910679492 0.832699033 0.738784913 0.914340848 0.532069396 0.909771742 0.768693323 0.679762046 1 16.19845364 -5.555155855 9.052029502 0.781704882 0.859155695 0.035961595 0.127517796 0.789690274 206.6283617 0.032606736 0.056898749 2.79E-06 5.555155855 0.077450813 EKTPSPKEEDEEPES(ph)PPEKK ddPTM_A459_MK2206_30min_R1 1 EKTPSPKEEDEEPESPPEKK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EKTPSPKEEDEEPES(1)PPEKK 101.16 0.0029881 27420000 2695 3834.2 4119.4 3546.3 2001.5 1611.8 1825.3 2511.7 2545.1 2168.2 TRUE FALSE 2465.776098 3584.592883 3839.786605 3819.43664 1921.776017 1703.058723 1703.537567 2489.740472 2809.672253 2436.812985 1.011885653 1.471016818 1.575741195 1.567390138 0.788643211 0.698887741 0.699084246 1.021719962 1.153011031 1 11.25077982 -6.265108363 24.99309724 0.875186513 1.423204252 0.611413975 0.199836464 218.3611231 1487472.219 0.065571138 0.077264734 5.43E-07 6.265108363 0.548017739 EKTPSPKEEDEEPES(ph)PPEKK ddPTM_A459_MK2206_30min_R2 1 EKTPSPKEEDEEPESPPEKK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EKTPSPKEEDEEPES(1)PPEKK 66.906 0.010655 35632000 124330 141720 145710 112040 112640 63977 145880 107150 91022 152800 TRUE FALSE 133848.8004 134682.3909 150567.8987 102885.9736 108217.1876 66411.68957 126725.7808 121154.8729 98938.92903 147814.1485 0.905520897 0.911160347 1.018629814 0.696049564 0.732116572 0.449291832 0.857331873 0.819643276 0.669346812 1 17.17342484 -5.76853709 24.99302589 0.73040512 0.941709361 0.300796142 0.137423044 183.696137 646847.5297 0.038252141 0.058116094 1.70E-06 5.76853709 0.211304241 EKVAS(ph)DTEEADRTSSK ddPTM_A459_MK2206_30min_R1 1 EKVASDTEEADRTSSK 16 2 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 EKVAS(0.99)DT(0.01)EEADRTSSK 87.352 0.016726 5106300 1498.2 1448.6 1461.1 1756.1 1227.6 1110.8 895.73 1353.1 709.02 668.05 TRUE FALSE 1370.770223 1354.295877 1361.924603 1891.355126 1178.702093 1173.692536 835.9774861 1341.269989 782.7251663 750.8130775 1.825714367 1.80377236 1.81393298 2.519075896 1.569900855 1.56322868 1.113429575 1.786423318 1.042503374 1 9.552309969 -6.655252432 2.631027441 1.321858748 1.966798683 0.534070681 0.29966864 0.23363696 3.286274574 0.1065518 0.105140145 2.21E-07 6.655252432 0.644939935 EKVASDT(ph)EEADR ddPTM_A459_MK2206_30min_R1 2 EKVASDTEEADR 12 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 EKVAS(0.342)DT(0.658)EEADR;EKVAS(0.151)DT(0.849)EEADR 136.33 0.014674 44188000 7984.7 8556.4 8993.1 7535 6513.6 6524.1 7296.3 6748 7211.5 7455.9 TRUE FALSE 7305.559336 7999.376805 8382.673428 8115.347006 6254.149519 6893.488904 6809.57714 6689.002947 7961.161232 8379.593181 0.871827448 0.954625915 1.000367589 0.968465513 0.746354791 0.822651978 0.812638155 0.798249128 0.950065362 1 13.03266449 -6.230545273 24.90652958 0.841170862 0.952918084 0.255126538 0.076253477 763.2475166 615322.6435 0.021950139 0.028334435 5.88E-07 6.230545273 0.111747223 EKVASDT(ph)EEADR ddPTM_A459_MK2206_30min_R2 1 EKVASDTEEADR 12 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 EKVAS(0.14)DT(0.86)EEADR 154.72 0.0045049 14572000 25842 29380 23281 24369 20808 18075 26680 20474 17512 24588 TRUE FALSE 27820.48339 27921.03192 24057.17692 22377.97475 19990.97337 18762.85679 23176.88395 23150.0221 19035.16211 23785.69557 1.169630852 1.173858121 1.011413639 0.940816495 0.840462004 0.788829435 0.974404296 0.973274968 0.800277715 1 14.53780659 -5.47841997 1.947845713 0.894451056 1.183021932 0.704848478 0.069412826 0.192342181 1.404335248 0.02084916 0.058790193 3.32E-06 5.47841997 0.288570877 EKVEPEVLSTDT(ph)QTSPEPGTR ddPTM_A459_MK2206_30min_R1 1 EKVEPEVLSTDTQTSPEPGTR 21 1 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 EKVEPEVLS(0.001)T(0.015)DT(0.649)QT(0.188)S(0.143)PEPGT(0.004)R 96.351 0.0005401 17086000 3929.4 4979.2 4680.2 4100.9 4530.6 4608.3 4122.5 4203.6 3953.9 3624 TRUE FALSE 3595.183896 4655.053175 4362.521064 4416.752029 4350.136608 4869.217964 3847.495547 4166.848368 4364.922054 4072.96848 0.882693768 1.142914117 1.07109129 1.08440614 1.068050644 1.195496108 0.944641621 1.0230495 1.071680784 1 11.99186493 -11.32535655 14.91664157 0.999934052 1.058285922 0.032480317 0.084911023 0.000180234 2.39E-06 0.079570591 0.01927699 4.73E-12 11.32535655 0.05835187 EKVEPEVLSTDTQTS(ph)PEPGTR ddPTM_A459_MK2206_30min_R2 3 EKVEPEVLSTDTQTSPEPGTR 21 1 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 EKVEPEVLST(0.001)DT(0.004)QT(0.277)S(0.701)PEPGT(0.017)R;EKVEPEVLSTDT(0.002)QT(0.247)S(0.735)PEPGT(0.016)R;EKVEPEVLST(0.021)DT(0.119)QT(0.186)S(0.554)PEPGT(0.119)R 164.48 9.21E-09 54715000 185517 196893 184234 202467 197017 180727 239980 169391 154128 198106 TRUE FALSE 199720.3242 187115.5799 190376.2696 185924.7984 189281.1226 187604.6926 208470.3377 191530.9853 167533.7748 191641.8174 1.042154196 0.976381786 0.993396286 0.970168207 0.987681734 0.978934009 1.08781236 0.99942167 0.874202599 1 17.54805287 -8.048923689 23.80729783 0.93700472 1.003692202 0.273752127 0.043946631 295.7186381 143900.2701 0.02908072 0.010992172 8.93E-09 8.048923689 0.066687482 EKVEPEVLSTDTQTSPEPGT(ph)R ddPTM_A459_MK2206_30min_R1 1 EKVEPEVLSTDTQTSPEPGTR 21 1 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 EKVEPEVLSTDT(0.002)QT(0.304)S(0.181)PEPGT(0.513)R 127.11 8.79E-05 23109000 4629.9 4763.6 4451.1 4168.9 4122.4 4226.9 4526 3925.4 3812.8 3805.6 TRUE FALSE 4236.102692 4453.488774 4148.971733 4489.9894 3958.196079 4466.223425 4224.078798 3891.080642 4209.154204 4277.066459 0.990422462 1.041248439 0.970050798 1.049782472 0.925446475 1.044225866 0.987611214 0.909754543 0.984121768 1 12.06240591 -7.533898587 24.88554085 0.95789946 1.003412287 0.142917279 0.041696411 330.4348735 746193.3302 0.018182345 0.010510042 2.92E-08 7.533898587 0.045512827 EKVIET(ph)PENDFK ddPTM_A459_MK2206_30min_R1 2 EKVIETPENDFK 12 1 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 EKVIET(1)PENDFK;EKVIET(1)PENDFK 95.751 0.024571 32569000 14443.7 15831.8 15667.5 13401.3 10622.8 9884.6 11498.1 12112.7 12699.2 11330.1 TRUE FALSE 13215.18747 14801.14694 14604.03375 14433.47045 10199.67138 10444.25751 10731.08273 12006.79994 14019.32728 12733.75833 1.03780731 1.162354944 1.146875367 1.13348079 0.800994578 0.820202272 0.842727061 0.942910933 1.100957543 1 13.63637067 -6.244629191 24.6527761 0.906460873 1.125056137 0.548268608 0.089489349 528.625435 775248.6983 0.028085467 0.036150239 5.69E-07 6.244629191 0.218595264 EKVIET(ph)PENDFK ddPTM_A459_MK2206_30min_R2 3 EKVIETPENDFK 12 1 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 EKVIET(1)PENDFK;EKVIET(1)PENDFK;EKVIET(1)PENDFK 129.29 0.0032251 53700200 305055 295729 268536 255323 271820 181119 325960 249775 220483 313878 TRUE FALSE 328410.2453 281043.5279 277488.8562 234462.2942 261146.981 188011.6105 283161.0605 282421.4501 239660.2128 303636.1866 1.081591259 0.925592997 0.913885988 0.772181659 0.860065409 0.619200276 0.932566911 0.930131067 0.789300562 1 18.21198421 -4.708139292 1.340322009 0.838027829 1.211133099 0.324694131 0.10123038 1.787877608 2.531311924 0.029599251 0.95684529 1.96E-05 4.708139292 0.37310527 EKVS(ph)SIDLEIDSLSSLLDDMTK ddPTM_A459_MK2206_30min_R1 1 EKVSSIDLEIDSLSSLLDDMTK 22 1 Q15942;H7C3R3;C9IZ41 Q15942 ZYX Zyxin 1 EKVS(0.5)S(0.5)IDLEIDSLSSLLDDMTK 57.985 0.037642 13877000 1082 1222.4 1082.2 872.03 491.15 565.36 853.61 1202.2 947.99 620.75 TRUE FALSE 989.9702182 1142.821538 1008.743279 939.1939017 471.5864555 597.3701946 796.6672344 1191.689292 1046.536953 697.6531964 1.419000477 1.638094033 1.445909349 1.346218876 0.675961148 0.856256658 1.141924438 1.708139944 1.500081929 1 9.44636624 EKVSS(ph)IDLEIDSLSSLLDDMTK ddPTM_A459_MK2206_30min_R1 1 EKVSSIDLEIDSLSSLLDDMTK 22 1 Q15942;H7C3R3;C9IZ41 Q15942 ZYX Zyxin 1 EKVS(0.395)S(0.521)IDLEIDS(0.067)LS(0.012)S(0.005)LLDDMTK 61.436 0.024328 23285000 3370.8 4242.9 4060.1 3254.8 2708.9 2409.3 3116.8 3072.5 3028.4 2470.2 TRUE FALSE 3084.095759 3966.686439 3784.511724 3505.48526 2600.998777 2545.712484 2908.883959 3045.637456 3343.213017 2776.227025 1.110894654 1.428804778 1.363185247 1.262679611 0.936882594 0.916968411 1.047783172 1.097041931 1.204228972 1 11.43890983 -6.14183888 5.345313233 1.034319338 1.31303978 0.581152427 0.107146116 0.166487223 6.630750717 0.033415793 0.043608495 7.21E-07 6.14183888 0.278720442 EKVSS(ph)IDLEIDSLSSLLDDMTK ddPTM_A459_MK2206_30min_R2 2 EKVSSIDLEIDSLSSLLDDMTK 22 1 Q15942;H7C3R3;C9IZ41 Q15942 ZYX Zyxin 1 EKVS(0.159)S(0.841)IDLEIDSLSSLLDDMTK;EKVS(0.143)S(0.856)IDLEIDSLSSLLDDMTK 107.09 3.28E-05 21963800 138811 154071 143755 118743 130114 87290 140061 100789 101658 104109 TRUE FALSE 149438.4769 146420.0582 148547.72 109041.3171 125005.0706 90611.88212 121670.8225 113962.4684 110500.0291 100711.9319 1.483820975 1.453850159 1.474976373 1.082705048 1.241214107 0.899713474 1.208107324 1.131568686 1.097189052 1 16.61987509 -5.76010378 24.9999732 1.102587335 1.469179354 0.780112661 0.091532053 15.37376647 287756.0884 0.024319538 0.039337989 1.74E-06 5.76010378 0.366592019 EKVSSIDLEIDSLSSLLDDMTK ddPTM_A459_MK2206_30min_R1 2 EKVSSIDLEIDSLSSLLDDMTK 22 1 Q15942;H7C3R3;C9IZ41 Q15942 ZYX Zyxin 0 ; 153.76 1.99E-07 6809400 4416.5 5523.1 5544.5 4383 3293.9 3012.5 3521.9 4164.5 3133.2 2967.6 FALSE TRUE 4040.853483 5163.545186 5168.154788 4720.579419 3162.696988 3183.065147 3286.960477 4128.090216 3458.907352 3335.248692 1.211559873 1.548173963 1.54955605 1.415360549 0.948264217 0.954371155 0.985521855 1.237715864 1.037076294 1 11.70357862 -6.226718647 7.848002279 1.033364511 1.449149178 0.741496491 0.116644731 0.144412192 29.1475814 0.036083845 0.046187222 5.93E-07 6.226718647 0.415784667 EKYIDQEELNK ddPTM_A459_MK2206_30min_R1 1 EKYIDQEELNK 11 1 P07900;P07900-2;Q14568;P08238;Q58FF8 P07900;P08238;Q58FF8 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 132.56 0.0056004 12230000 4038.5 4446.7 4777.4 4300.1 4038.2 2985.1 3848 3571.6 3591 3347.9 FALSE TRUE 3695.004368 4157.219022 4453.123399 4631.294447 3877.349943 3154.113782 3591.306941 3540.373878 3964.297301 3762.663127 0.982018385 1.104860808 1.18350308 1.230855458 1.030480224 0.838266322 0.954458802 0.940922362 1.053588155 1 11.87753841 -6.519144304 24.82902857 0.951435245 1.128338308 0.504722696 0.078252317 117.6107394 781960.3645 0.02653171 0.027106865 3.03E-07 6.519144304 0.176903063 EKYIDQEELNK ddPTM_A459_MK2206_30min_R2 2 EKYIDQEELNK 11 1 P07900;P07900-2;Q14568;P08238;Q58FF8 P07900;P08238;Q58FF8 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ; 181.66 0.00011517 22611000 201434 213065 197746 229550 230110 170830 247690 197895 185399 219138 FALSE TRUE 216855.9419 202484.5019 204338.7529 210795.0307 221074.7252 177331.0554 215168.0055 223760.556 201524.6699 211987.545 1.022965486 0.955171691 0.963918672 0.994374602 1.042866576 0.836516388 1.015003053 1.055536333 0.950643916 1 17.69361998 ELAEAAKEPLPVEQDDDIEVIVDETSDHT(ph)EETSPVR ddPTM_A459_MK2206_30min_R1 1 ELAEAAKEPLPVEQDDDIEVIVDETSDHTEETSPVR 36 1 Q676U5-4;Q676U5-3;Q676U5;C9JAY7;E7EVC7;Q676U5-5;Q676U5-2;C9JK97;C9J1B2 Q676U5-4 ATG16L1 Autophagy-related protein 16-1 1 ELAEAAKEPLPVEQDDDIEVIVDET(0.012)S(0.072)DHT(0.606)EET(0.225)S(0.084)PVR 91.786 7.25E-10 4464600 1963.1 1199.5 1708.3 1585.4 2521.2 2127.8 1969.6 2193.5 1016.2 952.54 TRUE FALSE 1796.128036 1121.412332 1592.345356 1707.507783 2420.775265 2248.274197 1838.211578 2174.322461 1121.837627 1070.547847 1.677765307 1.047512576 1.487411666 1.594985024 2.261249017 2.100115567 1.717075592 2.031037163 1.047909844 1 10.06413356 -5.801688672 3.275007812 1.774744396 1.354987894 0.061967451 0.419441987 0.447955785 9.840290382 0.118762289 0.198312752 1.58E-06 5.801688672 -0.419756502 ELAEDGYSGVEVR ddPTM_A459_MK2206_30min_R1 1 ELAEDGYSGVEVR 13 0 P23396;P23396-2;H0YEU2;E9PL09;F2Z2S8;H0YF32;H0YCJ7;E9PPU1;E9PQ96;E9PJH4;E9PK82 P23396 RPS3 40S ribosomal protein S3 0 152.64 0.0060003 5538700 1879.2 1775.1 1528.4 1638.1 1593.5 1974 1715 1591.1 1369.5 1411.6 FALSE TRUE 1719.364172 1659.540667 1424.656466 1764.266746 1530.027521 2085.766174 1600.595479 1577.18918 1511.864426 1586.479665 1.083760612 1.046052278 0.897998567 1.112063889 0.964416724 1.314713463 1.00889757 0.994143962 0.952968046 1 10.63161331 -7.507838482 24.83947021 0.984437704 1.066714952 0.133731752 0.102241953 1430.653422 2362782.82 0.044855149 0.029079554 3.11E-08 7.507838482 0.082277248 ELAEDGYSGVEVR ddPTM_A459_MK2206_30min_R2 2 ELAEDGYSGVEVR 13 0 P23396;P23396-2;H0YEU2;E9PL09;F2Z2S8;H0YF32;H0YCJ7;E9PPU1;E9PQ96;E9PJH4;E9PK82 P23396 RPS3 40S ribosomal protein S3 0 ; 157.68 0.0050534 11777100 26247 21498 26003 27278 23500.6 27528 29015 20182.2 23928.7 22729 FALSE TRUE 28256.4905 20430.44058 26869.92704 25049.30014 22577.84836 28575.59733 25205.29565 22820.08284 26009.97507 21987.35459 1.28512461 0.929190481 1.222062751 1.139259388 1.026856063 1.299637808 1.146354171 1.037873053 1.182951544 1 14.42438642 -10.77557265 4.783707284 0.999963922 1.135563627 0.125291885 0.110949218 4.02E-05 6.28E-06 0.101169858 0.02453077 1.68E-11 10.77557265 0.135599706 ELAGGDFT(ph)SPDASASSCGK ddPTM_A459_MK2206_30min_R1 1 ELAGGDFTSPDASASSCGK 19 0 Q9ULJ8-3;Q9ULJ8;Q9ULJ8-4;Q9ULJ8-5 Q9ULJ8-3 PPP1R9A Neurabin-1 1 ELAGGDFT(0.567)S(0.426)PDAS(0.004)AS(0.003)SCGK 103.76 0.0022689 5337600 1952.9 1878.7 2106.8 1862.6 2077.9 1774.6 2227.4 1900.2 1764.6 1741.4 TRUE FALSE 1786.7956 1756.396289 1963.796286 2006.057775 1995.132843 1875.076318 2078.81421 1883.586752 1948.036485 1957.137779 0.912963624 0.897431089 1.003402166 1.024995683 1.019413587 0.958070678 1.062170601 0.962419086 0.995349692 1 10.93452961 -5.264354837 24.53560482 1.003733364 0.905197349 0.654662642 0.028477677 101.9018329 857585.0873 0.007162059 0.016024141 5.44E-06 5.264354837 -0.098536015 ELAGGDFT(ph)SPDASASSCGK ddPTM_A459_MK2206_30min_R2 1 ELAGGDFTSPDASASSCGK 19 0 Q9ULJ8-3;Q9ULJ8;Q9ULJ8-4;Q9ULJ8-5 Q9ULJ8-3 PPP1R9A Neurabin-1 1 ELAGGDFT(0.58)S(0.42)PDASASSCGK 125.45 0.00090921 4882500 32029 35559 30182 36902 35649 32515 36701 27025 29385 37974 TRUE FALSE 34481.16487 33793.19177 31188.25282 33886.98856 34249.24114 33752.38111 31882.11461 30557.26029 31940.85418 36734.91149 0.938648372 0.919920326 0.849008519 0.922473668 0.93233493 0.918809376 0.867896868 0.831831602 0.86949588 1 15.16486418 -7.25752238 24.56120549 0.878292054 0.912151047 0.012498404 0.047396791 641.4124729 4021934.156 0.018157329 0.013504044 5.53E-08 7.25752238 0.033858993 ELAGGDFTS(ph)PDASASSCGK ddPTM_A459_MK2206_30min_R1 1 ELAGGDFTSPDASASSCGK 19 0 Q9ULJ8-3;Q9ULJ8;Q9ULJ8-4;Q9ULJ8-5 Q9ULJ8-3 PPP1R9A Neurabin-1 1 ELAGGDFT(0.021)S(0.979)PDASASSCGK 180.64 4.66E-13 5284600 1120.2 1394.3 1030.1 825.51 973.61 862.56 922 1087.7 987.77 776.39 TRUE FALSE 1024.921108 1303.530817 960.179682 889.0909232 934.829052 911.3974018 860.4950623 1078.190354 1090.452226 872.5750546 1.174593638 1.49388962 1.100397813 1.018927734 1.071345149 1.0444917 0.986155927 1.235641963 1.249694477 1 9.76913542 -5.351797466 8.75590371 1.08787858 1.333656045 0.438326538 0.11138412 0.28936353 25.70498703 0.029439581 0.061463776 4.45E-06 5.351797466 0.245777464 ELAGGDFTS(ph)PDASASSCGK ddPTM_A459_MK2206_30min_R2 1 ELAGGDFTSPDASASSCGK 19 0 Q9ULJ8-3;Q9ULJ8;Q9ULJ8-4;Q9ULJ8-5 Q9ULJ8-3 PPP1R9A Neurabin-1 1 ELAGGDFT(0.232)S(0.768)PDASASSCGK 135.08 0.00019466 4975300 27971 35811 25469 29022 33158 27434 33635 23426 23817 33747 TRUE FALSE 30112.48127 34032.67781 26318.12375 26650.80976 31856.05031 28478.02009 29218.6841 26487.85863 25888.55961 32645.83815 0.922398779 1.042481362 0.80617087 0.816361634 0.975807396 0.872332331 0.895020185 0.811370151 0.793012558 1 14.99461146 -5.261146789 24.99970987 0.867182753 0.982440069 0.27277924 0.072368914 31.52308844 2693113.525 0.01849739 0.043148362 5.48E-06 5.261146789 0.115257317 ELAPAWEDT(ph)SPEQDNR ddPTM_A459_MK2206_30min_R2 1 ELAPAWEDTSPEQDNR 16 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 ELAPAWEDT(0.832)S(0.168)PEQDNR 151.11 0.0015375 0 10300 11160 10342 11984 9613.9 13642 12115 8420.3 8092.9 9482.4 TRUE FALSE 11088.57592 10605.81063 10686.79712 11004.86887 9236.40998 14161.15587 10524.28595 9520.862121 8796.805813 9172.990065 1.208828947 1.156199947 1.165028747 1.199703563 1.006913767 1.543788423 1.147312476 1.037923518 0.958990008 1 13.16317636 -7.757691309 3.683765114 0.990137069 1.208391675 0.363607281 0.126819593 0.253551169 7.356920398 0.071815585 0.034939991 1.75E-08 7.757691309 0.218254606 ELAPAWEDTS(ph)PEQDNR ddPTM_A459_MK2206_30min_R1 1 ELAPAWEDTSPEQDNR 16 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 ELAPAWEDT(0.022)S(0.978)PEQDNR 240.5 6.26E-65 0 2276.9 1669.9 2340.4 1760.1 2173.1 1877.5 2324.3 2112.2 1975.4 1952.9 TRUE FALSE 2083.237699 1561.189206 2181.540169 1895.663207 2086.540825 1983.802427 2169.250188 2093.733258 2180.749899 2194.839996 0.949152422 0.71129978 0.993940412 0.863690843 0.950657373 0.903848313 0.988340923 0.953934347 0.993580354 1 11.09990006 -6.322385255 0.436347622 0.999481377 0.829392506 0.289701304 0.070866931 1.882468568 0.666309371 0.062035189 0.143677021 4.76E-07 6.322385255 -0.170088871 ELAPYDENWFYTR ddPTM_A459_MK2206_30min_R1 1 ELAPYDENWFYTR 13 0 P39019;M0R2L9;M0QYF7;M0R140 P39019 RPS19 40S ribosomal protein S19 0 173.76 0.001957 7049000 1863.4 1697.2 1765.6 1299.9 1234 1704 1855 1414.4 1452.5 1724.9 FALSE TRUE 1704.908045 1586.711972 1645.755991 1400.018523 1184.847167 1800.479007 1731.256335 1402.03405 1603.492573 1938.593634 0.879456125 0.818486115 0.848943256 0.722182565 0.611189032 0.928755246 0.89304757 0.72322225 0.827142184 1 10.9207947 ELAPYDENWFYTR ddPTM_A459_MK2206_30min_R2 2 ELAPYDENWFYTR 13 0 P39019;M0R2L9;M0QYF7;M0R140 P39019 RPS19 40S ribosomal protein S19 0 ; 145.09 0.0088189 28954000 29865 27642 27169 31764 28233.6 28337 36440 30786 28021.5 26155.6 FALSE TRUE 32151.48736 26269.33848 28074.8009 29168.77959 27125.007 29415.38439 31655.38423 34809.8359 30458.75942 25302.14491 1.270702048 1.038225754 1.109581855 1.152818454 1.072043777 1.162564853 1.251094891 1.375766206 1.203801477 1 14.62697207 -7.104439799 4.22699908 1.238086943 1.123370647 0.082309859 0.104789906 0.370821438 11.29462636 0.039473024 0.030448114 7.86E-08 7.104439799 -0.114716296 ELAS(ph)PVSPELR ddPTM_A459_MK2206_30min_R1 1 ELASPVSPELR 11 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 ELAS(0.532)PVS(0.468)PELR 107.34 0.0106 4067400 2016.4 1898.4 1839.2 1286.2 1633.6 1918.4 2247.7 1515.8 1860.1 2916.5 TRUE FALSE 1844.894591 1774.813815 1714.360228 1385.263347 1568.530253 2027.01815 2097.760034 1502.54752 2053.464051 3277.818038 0.562842284 0.541461971 0.52301873 0.422617525 0.478528776 0.618404721 0.639986726 0.458398698 0.626472863 1 11.67852005 -11.64947224 0.351210874 1.538222095 0.514034372 0.818692238 0.065689259 18.13629555 0.911006708 7.809571477 0.054661101 2.24E-12 11.64947224 -1.024187723 ELAS(ph)PVSPELR ddPTM_A459_MK2206_30min_R2 2 ELASPVSPELR 11 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 ELAS(1)PVSPELR;ELAS(1)PVSPELR 157.03 0.00055491 3457500 46240 33510 32427 39339 41141 42707 41698 34685 33369 37550 TRUE FALSE 49780.16995 31845.94213 33508.1 36124.87786 39525.59762 44332.24481 36223.00251 39218.44859 36271.3753 36324.74658 1.370420296 0.876701013 0.922459292 0.994497726 1.088117643 1.220441957 0.997199043 1.079662002 0.998530719 1 15.14866511 -8.861004676 0.00573559 0.000104727 2.072847517 0.026649738 0.136398183 53904.71267 148.7344035 27195.71161 26543.95716 1.38E-09 8.861004676 2.072742789 ELASPVS(ph)PELR ddPTM_A459_MK2206_30min_R1 1 ELASPVSPELR 11 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 ELAS(0.203)PVS(0.797)PELR 126.5 0.0031469 3985700 2139 1857.4 1714.2 1569.4 1642.8 1768.6 1845.3 1507.8 1915.6 2407.6 TRUE FALSE 1957.066818 1736.482922 1597.84488 1690.27546 1577.363797 1868.736604 1722.203404 1494.617464 2114.733475 2705.871664 0.723266681 0.641746224 0.590510223 0.624669485 0.582941097 0.690622777 0.636468989 0.55236081 0.781535024 1 11.4018777 -8.559644536 4.127513838 0.999748764 0.630644966 0.853520004 0.047614753 0.074277702 4.098630005 0.045919207 0.012016706 2.76E-09 8.559644536 -0.369103798 ELASPVS(ph)PELR ddPTM_A459_MK2206_30min_R2 2 ELASPVSPELR 11 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 ELAS(0.007)PVS(0.993)PELR;ELAS(0.004)PVS(0.996)PELR 127.52 0.0029518 7423500 54979 54738 49526 57024 47318 53788 52756 40277 43631 51772 TRUE FALSE 59188.23451 52019.79052 51177.17212 52364.95679 45460.05757 55834.94003 45829.07383 45541.34219 47425.94551 50082.68388 1.181810357 1.038678172 1.021853626 1.0455701 0.907700108 1.11485519 0.915068249 0.909323117 0.946952955 1 15.61202426 -1.522878746 0.472721499 0.957922489 6.415484536 0.508168638 0.061297824 80.36964778 0.917449011 0.03599931 429.2302095 0.03 1.522878746 5.457562046 ELASQPDVDGFLVGGASLKPEFVDIINAK ddPTM_A459_MK2206_30min_R1 2 ELASQPDVDGFLVGGASLKPEFVDIINAK 29 1 P60174;P60174-3;P60174-4 P60174 TPI1 Triosephosphate isomerase 0 ; 207.42 2.93E-43 23940000 3344.1 4052.1 4202.1 3901.4 3570.8 3701.6 3930.6 3633.8 3051.5 3083.2 FALSE TRUE 3059.666734 3788.307553 3916.87316 4201.886504 3428.567475 3911.181393 3668.396846 3602.03007 3368.714345 3465.170093 0.882977358 1.093252987 1.130355236 1.212606132 0.989436992 1.128712672 1.058648421 1.03949589 0.97216421 1 11.75871046 -7.975427237 2.332087536 0.986714737 1.079215226 0.132786652 0.083949549 0.608011929 6.225716651 0.067111549 0.023559335 1.06E-08 7.975427237 0.092500489 ELDALDANDELTPLGR ddPTM_A459_MK2206_30min_R2 1 ELDALDANDELTPLGR 16 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 136.33 0.0056806 2686100 7726.9 10305 9574.2 9140.9 10067 12885 12778 8528.7 7427.8 9205.1 FALSE TRUE 8318.477405 9793.268685 9893.399049 8394.05923 9671.718997 13375.3477 11100.23325 9643.430373 8073.856618 8904.738341 0.934163036 1.099781747 1.111026363 0.942650857 1.086131746 1.502048369 1.246553557 1.08295494 0.90669218 1 13.1203575 -3.537589036 0.725562697 1.138284615 3.26E-09 0.082478736 0.161019483 39.0798995 3.885579069 0.06829782 54.86958847 0.000290009 3.537589036 -1.138284612 ELDDRDHYGNK ddPTM_A459_MK2206_30min_R1 1 ELDDRDHYGNK 11 1 C9J4M6;C9J2Y9;P30876 C9J4M6 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 0 90.149 0.022487 3018400 3807 4504 4148 3430.7 4346.6 3492.5 3914.2 4018.4 3031.9 3071.5 FALSE TRUE 3483.194659 4210.788781 3866.445317 3694.933108 4173.465718 3690.242332 3653.09086 3983.267552 3347.076855 3452.020609 1.009030667 1.219804068 1.120052791 1.070368207 1.208992121 1.069009357 1.058247118 1.153894488 0.969599326 1 11.75322536 -8.267631609 24.73952792 0.984799638 1.115822338 0.396454 0.063560364 443.6932032 1772636.99 0.053404974 0.01524192 5.40E-09 8.267631609 0.1310227 ELDEEGS(ph)DPPLPGR ddPTM_A459_MK2206_30min_R1 4 ELDEEGSDPPLPGR 14 0 C9JQV0;Q9BRJ6;H7C0T1;H7C2R9 C9JQV0 C7orf50 Uncharacterized protein C7orf50 1 ELDEEGS(1)DPPLPGR;ELDEEGS(1)DPPLPGR;ELDEEGS(1)DPPLPGR;ELDEEGS(1)DPPLPGR 187.97 9.06E-05 62564000 11851 12769.9 12441.1 11591.6 13264.5 13408 11885.7 10573.3 10106.3 8593.8 TRUE FALSE 10843.01022 11938.57719 11596.63279 12484.38704 12736.14688 14167.14937 11092.82664 10480.85875 11156.88605 9658.464824 1.122643237 1.236073994 1.200670397 1.29258503 1.318651267 1.466811717 1.148508261 1.085147479 1.155140724 1 13.23757818 -7.507388095 24.13060701 1.095451973 1.273983657 0.483861818 0.09056477 422.7929951 658611.3959 0.041143758 0.026725003 3.11E-08 7.507388095 0.178531685 ELDEEGS(ph)DPPLPGR ddPTM_A459_MK2206_30min_R2 4 ELDEEGSDPPLPGR 14 0 C9JQV0;Q9BRJ6;H7C0T1;H7C2R9 C9JQV0 C7orf50 Uncharacterized protein C7orf50 1 ELDEEGS(1)DPPLPGR;ELDEEGS(1)DPPLPGR;ELDEEGS(1)DPPLPGR;ELDEEGS(1)DPPLPGR 160.48 0.00029039 82817900 148738 185567 155371 208986 180711 179868 213055 158016 150039 182433 TRUE FALSE 160125.4956 176352.0126 160550.9916 191911.1753 173615.3781 186713.0028 185080.6226 178669.2338 163089.121 176480.2262 0.907328255 0.999273496 0.909739267 1.08743727 0.983766748 1.057982568 1.048732918 1.012403699 0.924121215 1 17.42914702 -5.74426675 24.99998569 1.018592481 0.944829659 0.348764508 0.048294 285.6250131 415810.7957 0.012846272 0.022178004 1.80E-06 5.74426675 -0.073762822 ELDEHELDYDEEVPEEPAPAVQEDEAEKAGAEDDEEKGEGT(ph)PR ddPTM_A459_MK2206_30min_R2 1 ELDEHELDYDEEVPEEPAPAVQEDEAEKAGAEDDEEKGEGTPR 43 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 ELDEHELDYDEEVPEEPAPAVQEDEAEKAGAEDDEEKGEGT(1)PR 55.49 2.66E-05 7688100 45625 46097 43513 34450 38143 21385 47244 35401 25987 57231 TRUE FALSE 49118.08508 43807.89001 44963.7017 31635.3248 36645.31417 22198.82116 41040.80605 40028.03225 28247.30229 55363.55716 0.88719164 0.791276649 0.812153409 0.571410625 0.661903173 0.400964503 0.741296408 0.723003259 0.510214729 1 15.75664902 -5.701936743 7.739797538 0.639871165 0.82799652 0.205156428 0.15198705 0.344461941 38.49949925 0.039339812 0.068110608 1.99E-06 5.701936743 0.188125355 ELDFSS(ph)PGR ddPTM_A459_MK2206_30min_R1 1 ELDFSSPGR 9 0 Q4AC94;Q4AC94-2;Q4AC94-4;Q4AC94-1;Q4AC94-3;H7C288;H7BZB4;H0YG44 Q4AC94 C2CD3 C2 domain-containing protein 3 1 ELDFS(0.083)S(0.917)PGR 120.27 0.0038104 0 3732.6 3638.2 3805.3 2919.3 4249.3 3685.8 4010.7 3664.1 3086.8 2734.5 TRUE FALSE 3415.122769 3401.352519 3547.006838 3144.144992 4080.041383 3894.486811 3743.153521 3632.06516 3407.683906 3073.270504 1.11123403 1.10675338 1.154147295 1.023061584 1.327589412 1.267212504 1.21797073 1.181824104 1.108813527 1 11.58555904 -6.242007894 24.99082179 1.198861926 1.103320694 0.168664748 0.088686002 1328.294916 1708318.437 0.025946795 0.033445931 5.73E-07 6.242007894 -0.095541232 ELDFSS(ph)PGR ddPTM_A459_MK2206_30min_R2 2 ELDFSSPGR 9 0 Q4AC94;Q4AC94-2;Q4AC94-4;Q4AC94-1;Q4AC94-3;H7C288;H7BZB4;H0YG44 Q4AC94 C2CD3 C2 domain-containing protein 3 1 ELDFS(0.033)S(0.967)PGR;ELDFS(0.051)S(0.949)PGR 100.82 0.017575 1861400 68722 75403 69395 82823 85609 78724 87997 65813 61037 80211 TRUE FALSE 73983.40916 71658.59667 71708.59466 76056.09596 82247.56051 81719.89698 76442.8882 74414.98507 66345.88793 77593.72164 0.95347159 0.923510242 0.924154598 0.980183633 1.059977003 1.053176665 0.985168472 0.959033585 0.855041961 1 16.2436523 -2.126193216 19.50497456 0.971287707 0.2081141 0 0.058440285 0 0 0.014627986 0 0.007478367 2.126193216 -0.763173607 ELDGERER ddPTM_A459_MK2206_30min_R1 1 ELDGERER 8 1 P67936;A0A2R8Y5V9;A0A2R8YGX3;A0A2R8YH90;A0A590UJB9;A0A590UK79;A0A5F9UKJ4 P67936 TPM4 Tropomyosin alpha-4 chain 0 116.25 0.026612 1953400 1797.6 1452.3 1445.8 1913.4 1148.4 1460.9 1687.7 2690.5 136.56 617.02 FALSE TRUE 1644.70468 1357.755006 1347.663124 2060.7704 1102.656796 1543.614896 1575.116612 2666.977242 150.7559007 693.4610959 2.371733166 1.957939694 1.943386777 2.971717392 1.590077371 2.225957454 2.271384252 3.845893098 0.217396335 1 9.437671137 ELDPSLVSANDS(ph)PSGMQTR ddPTM_A459_MK2206_30min_R1 4 ELDPSLVSANDSPSGMQTR 19 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ELDPSLVSANDS(0.757)PS(0.243)GMQTR;ELDPSLVSANDS(0.955)PS(0.045)GMQTR;ELDPSLVS(0.178)ANDS(0.757)PS(0.049)GMQT(0.016)R;ELDPSLVSANDS(0.692)PS(0.282)GMQT(0.026)R 208.4 2.81E-30 17292900 8316.78 5970.34 5616.15 5322.67 6587.8 5914.29 5995.29 5548.23 5539.49 4986.96 TRUE FALSE 7609.394188 5581.669781 5234.941385 5732.622966 6325.393976 6249.151989 5595.355143 5499.72241 6115.339809 5604.782254 1.357660983 0.995876294 0.934013339 1.02280922 1.128570868 1.114967844 0.998318024 0.981255321 1.091093201 1 12.45244261 -4.757731253 24.99975795 1.030645205 1.357661448 0.732345479 0.059485508 60.89946326 410517.066 0.016203865 0.117362172 1.75E-05 4.757731253 0.327016243 ELDPSLVSANDS(ph)PSGMQTR ddPTM_A459_MK2206_30min_R2 5 ELDPSLVSANDSPSGMQTR 19 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ELDPSLVS(0.018)ANDS(0.902)PS(0.079)GMQT(0.001)R;ELDPSLVS(0.013)ANDS(0.98)PS(0.007)GMQTR;ELDPSLVS(0.007)ANDS(0.99)PS(0.003)GMQTR;ELDPSLVS(0.066)ANDS(0.596)PS(0.337)GMQTR;ELDPSLVS(0.019)ANDS(0.934)PS(0.047)GMQTR 178.32 6.85E-13 66201500 190258 188130 148784 183213 197207 197370 214053 165098.4 148786.1 151515.6 TRUE FALSE 204824.2988 178787.7378 153744.3843 168243.9118 189463.6623 204881.0537 185947.584 186677.3277 161727.246 146571.6584 1.397434545 1.219797468 1.04893665 1.147861146 1.292635045 1.397821761 1.268646245 1.273624996 1.103400533 1 17.16124664 -8.461277342 3.226353143 1.001527133 1.250365442 0.419925165 0.099255819 0.244848283 5.321488658 0.105494558 0.02807416 3.46E-09 8.461277342 0.248838309 ELDPSLVSANDSPS(ph)GMQTR ddPTM_A459_MK2206_30min_R1 1 ELDPSLVSANDSPSGMQTR 19 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ELDPS(0.002)LVS(0.001)ANDS(0.12)PS(0.877)GMQTR 186.74 2.45E-15 28406000 9596.7 7646.4 7138 6133 8369.4 6657.4 7514.7 5984.1 6275.9 5482.2 TRUE FALSE 8780.450271 7148.61797 6653.492448 6605.364723 8036.029076 7034.336235 7013.408074 5931.781645 6928.302264 6161.376324 1.425079367 1.160230701 1.079871135 1.072059938 1.304258765 1.141682615 1.138285945 0.962736462 1.124473153 1 12.58903694 -4.765993653 3.4745208 1.11054456 1.469797261 0.548005209 0.087180559 0.253722216 4.910901875 0.022900495 0.247909803 1.71E-05 4.765993653 0.3592527 ELDPSLVSANDSPS(ph)GMQTR ddPTM_A459_MK2206_30min_R2 2 ELDPSLVSANDSPSGMQTR 19 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ELDPSLVSANDS(0.112)PS(0.884)GMQT(0.003)R;ELDPSLVSANDS(0.044)PS(0.955)GMQT(0.001)R 139.19 0.0012945 4934500 43418 42971 36230 43916 49215 47602 51981 32946 37509 41255 TRUE FALSE 46742.11546 40837.12263 37437.89012 40327.92232 47282.57181 49413.52747 45155.83226 37252.15532 40771.46502 39908.85273 1.171221728 1.023259749 0.93808485 1.010500667 1.184763995 1.238159558 1.131474076 0.933430875 1.02161456 1 15.28442119 -7.75712613 24.9997623 0.983142033 1.095660107 0.263452264 0.087634038 173.4256329 1005199.874 0.049254576 0.027157565 1.75E-08 7.75712613 0.112518074 ELDQDMVT(ph)EDEDDPGSHK ddPTM_A459_MK2206_30min_R2 4 ELDQDMVTEDEDDPGSHK 18 0 Q9NRL2;Q9NRL2-2;A0A087WWN7 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 ELDQDMVT(1)EDEDDPGSHK;ELDQDMVT(1)EDEDDPGSHK;ELDQDMVT(1)EDEDDPGSHK;ELDQDMVT(0.999)EDEDDPGS(0.001)HK 99.11 0.0065002 10207200 95524 73084 71599 74197 65588 61119 90797 66969 54893.3 89735 TRUE FALSE 102837.3909 69454.75483 73986.07492 68134.86776 63012.68557 63444.92637 78875.24483 75722.07824 59667.82001 86806.9543 1.184667654 0.800105883 0.852305849 0.784901029 0.725894441 0.730873775 0.908628179 0.872304285 0.687362211 1 16.405523 -4.760395998 24.99874328 0.811313557 1.184668096 0.599850775 0.089681162 17.17743021 411363.9882 0.021606133 0.1285068 1.74E-05 4.760395998 0.373354539 ELDQDMVT(ph)EDEDDPGSHKR ddPTM_A459_MK2206_30min_R1 2 ELDQDMVTEDEDDPGSHKR 19 1 Q9NRL2;Q9NRL2-2;A0A087WWN7 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR 87.652 0.0018368 28842000 14895.9 15981.1 13595.3 10817.9 12163.5 14168.1 14797.5 11643.4 14643.3 14258.2 TRUE FALSE 13628.92548 14940.72749 12672.48891 11651.09653 11679.00204 14970.28558 13810.38577 11541.60298 16165.52344 16024.61346 0.850499484 0.932361178 0.790814015 0.727075044 0.728816459 0.934205721 0.861823333 0.720242208 1.008793346 1 13.96800194 -8.282050011 24.32422123 1.004396796 0.820420271 0.496694095 0.074934839 590.0252731 696325.8602 0.076290172 0.019800702 5.22E-09 8.282050011 -0.183976525 ELDQDMVT(ph)EDEDDPGSHKR ddPTM_A459_MK2206_30min_R2 8 ELDQDMVTEDEDDPGSHKR 19 1 Q9NRL2;Q9NRL2-2;A0A087WWN7 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR 83.115 0.0047817 225574800 833867 785093 770169 860190 749955 714962 851223 709977 534920 822394 TRUE FALSE 897708.4987 746106.4233 795846.0501 789909.7254 720507.9985 742170.3799 739456.3976 802773.4316 581446.3747 795559.3511 1.128399154 0.937838795 1.000360374 0.992898549 0.905662158 0.932891278 0.929479864 1.009067935 0.730864861 1 19.60161004 -1.522878745 0.607979867 0.922743502 12.63742012 0.339694952 0.078188175 211.8241842 1.59575177 0.033257984 3304.146107 0.03 1.522878745 11.71467661 ELDRYS(ph)LDSEDLYSR ddPTM_A459_MK2206_30min_R2 1 ELDRYSLDSEDLYSR 15 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 ELDRY(0.171)S(0.776)LDS(0.053)EDLYSR 70.987 0.02758 12382000 16112 18421 18939 19416 20144 21054 19424 17935 17989 14345 TRUE FALSE 17345.54711 17506.23993 19570.41681 17829.65069 19353.04534 21855.22472 16873.60547 20279.16608 19553.6507 13876.92382 1.24995621 1.261536069 1.410284949 1.284841721 1.394620709 1.574932961 1.215947113 1.461358896 1.409076749 1 13.76040017 -10.69012138 4.182189164 0.999884661 1.364446722 0.516260565 0.105255711 14309871.21 18288799.26 12319.46109 0.02547999 2.04E-11 10.69012138 0.364562061 ELDRYSLDS(ph)EDLYSR ddPTM_A459_MK2206_30min_R1 2 ELDRYSLDSEDLYSR 15 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 ELDRYS(0.061)LDS(0.939)EDLYSR;ELDRY(0.001)S(0.078)LDS(0.917)EDLY(0.002)S(0.003)R 93.215 0.0069861 37774000 6692.6 5382.4 5341.4 5471.3 6416.5 6554.8 5500.4 4985.7 4469.3 4094.8 TRUE FALSE 6123.359226 5032.004782 4978.84065 5892.700474 6160.917218 6925.927111 5133.478352 4942.110551 4933.899729 4602.094738 1.330559142 1.093416165 1.081864006 1.280438759 1.338720206 1.504951007 1.115465596 1.073882836 1.072098688 1 12.16807497 -7.504858248 24.74263223 1.062729241 1.262695989 0.436316342 0.116142327 748.5424186 1027773.701 0.055119428 0.036335967 3.13E-08 7.504858248 0.199966748 ELEAIFGRPVVDGEEGEPHS(ph)ISPR ddPTM_A459_MK2206_30min_R1 4 ELEAIFGRPVVDGEEGEPHSISPR 24 1 P36507;G5E9C7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 ELEAIFGRPVVDGEEGEPHS(0.739)IS(0.261)PR;ELEAIFGRPVVDGEEGEPHS(0.792)IS(0.208)PR;ELEAIFGRPVVDGEEGEPHS(0.725)IS(0.275)PR;ELEAIFGRPVVDGEEGEPHS(0.62)IS(0.38)PR 103.85 6.25E-07 86236400 15777.21 16652.81 15028.81 10810.38 13705.99 14745.63 17309.18 12177.03 14599.93 15321.24 TRUE FALSE 14435.27544 15568.70904 14008.69625 11642.99734 13160.0514 15580.51483 16154.51618 12070.56751 16117.64497 17219.35088 0.83831705 0.904140298 0.813543806 0.676157738 0.764259436 0.90482591 0.938160579 0.700988533 0.936019312 1 14.07174314 -6.765724021 24.99139449 0.879945762 0.799060933 0.210846765 0.090939408 222.7655072 1299334.081 0.032884592 0.030025323 1.72E-07 6.765724021 -0.080884828 ELEAIFGRPVVDGEEGEPHS(ph)ISPR ddPTM_A459_MK2206_30min_R2 5 ELEAIFGRPVVDGEEGEPHSISPR 24 1 P36507;G5E9C7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 ELEAIFGRPVVDGEEGEPHS(0.793)IS(0.207)PR;ELEAIFGRPVVDGEEGEPHS(0.66)IS(0.34)PR;ELEAIFGRPVVDGEEGEPHS(0.656)IS(0.344)PR;ELEAIFGRPVVDGEEGEPHS(0.63)IS(0.37)PR;ELEAIFGRPVVDGEEGEPHS(0.5)IS(0.5)PR 91.964 1.63E-05 77203800 196866.6 212371 203395 214033 206256.9 199778 218279 177117 171110.3 207930.3 TRUE FALSE 211938.8583 201824.965 210176.0878 196545.8192 198158.2177 207380.6918 189618.7051 200266.8 185993.1646 201145.5513 1.053659188 1.003377721 1.044895532 0.97713232 0.985148398 1.030998152 0.942694004 0.995631267 0.924669541 1 17.61788031 -5.505494867 0.479983445 0.967963466 1.063305737 0.379182863 0.030934025 2.670774931 0.781647796 0.02231003 0.134302177 3.12E-06 5.505494867 0.095342271 ELEAIFGRPVVDGEEGEPHSIS(ph)PR ddPTM_A459_MK2206_30min_R1 1 ELEAIFGRPVVDGEEGEPHSISPR 24 1 P36507;G5E9C7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 ELEAIFGRPVVDGEEGEPHS(0.185)IS(0.815)PR 85.191 4.67E-05 6333200 474.01 493.92 594.29 409.75 381.33 593.62 734.41 315.06 477.56 621.07 TRUE FALSE 433.6929604 461.7657182 553.9512506 441.309016 366.1408186 627.2302514 685.4188489 312.3054636 527.204071 698.0128404 0.62132519 0.6615433 0.793611834 0.632236243 0.524547397 0.898594145 0.981957364 0.4474208 0.755292798 1 9.447109766 -6.767600688 24.99996832 0.792448323 0.654843515 0.217220964 0.157669302 308.3507115 1251148.344 0.057110988 0.051621075 1.71E-07 6.767600688 -0.137604807 ELEAIFGRPVVDGEEGEPHSIS(ph)PR ddPTM_A459_MK2206_30min_R2 2 ELEAIFGRPVVDGEEGEPHSISPR 24 1 P36507;G5E9C7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 ELEAIFGRPVVDGEEGEPHS(0.109)IS(0.891)PR;ELEAIFGRPVVDGEEGEPHS(0.409)IS(0.591)PR 65.151 0.0015994 13983300 15691.3 16312.4 14227.3 18015.4 16546.2 16331.9 17154.6 12475.5 11855.9 12072.8 TRUE FALSE 16892.63799 15502.34994 14701.63108 16543.48419 15896.51305 16953.4219 14902.18041 14106.09068 12887.10475 11678.86552 1.446427991 1.327384916 1.25882356 1.416531782 1.361135036 1.451632598 1.275995548 1.20783056 1.103455188 1 13.51161252 -8.08028314 1.288504902 1.011180195 1.370296981 0.834216663 0.057527662 0.174839602 0.529948463 0.054703427 0.018189534 8.31E-09 8.08028314 0.359116786 ELEDATETADAMNR ddPTM_A459_MK2206_30min_R1 2 ELEDATETADAMNR 14 0 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 ; 272.32 2.47E-42 47536000 5988.8 5839.5 5479.8 4718.7 6348 5473.3 5633.1 5689.3 4779.4 4488.3 FALSE TRUE 5479.421112 5459.347489 5107.846444 5082.135092 6095.145718 5783.193516 5257.326177 5639.55905 5276.235733 5044.344489 1.086250379 1.082270947 1.012588743 1.007491678 1.208312741 1.146470771 1.042221876 1.117996414 1.045970541 1 12.30045109 -3.70000188 3.026930391 1.079084591 3.475598728 0 0.064048201 16551.55529 523.5368665 0.017050682 273232.1641 0.000199525 3.70000188 2.396514137 ELEDATETADAMNR ddPTM_A459_MK2206_30min_R2 3 ELEDATETADAMNR 14 0 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 ;; 161.93 0.0038709 20898400 37857.8 44380.8 40637.1 48046.3 52885.6 45398.4 57468.8 40323.8 37682.2 42016.2 FALSE TRUE 40756.22228 42176.91401 41991.92063 44120.7636 50809.04562 47126.06792 49923.07753 45594.25911 40959.72964 40645.21483 1.002731132 1.037684613 1.033133194 1.08550942 1.250062174 1.15944935 1.228264575 1.12176204 1.007738053 1 15.31079789 -5.945390692 4.351105357 1.142703042 1.02745921 0.250671386 0.076926637 0.262762034 10.40702422 0.022563317 0.033821476 1.13E-06 5.945390692 -0.115243832 ELEEEEENS(ph)DEDELDSHTMVK ddPTM_A459_MK2206_30min_R1 4 ELEEEEENSDEDELDSHTMVK 21 0 A0A087WZ06;Q13188;Q13188-2;E5RFQ9 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(0.924)DEDELDS(0.074)HT(0.002)MVK;ELEEEEENS(0.486)DEDELDS(0.486)HT(0.027)MVK 194.04 1.09E-16 95558300 17764.74 18739.64 17138.35 15887.77 18499.17 15844.9 18534.88 16491.66 15649.79 15390.31 TRUE FALSE 16253.75558 17519.68603 15975.04655 17111.4488 17762.30889 16742.02455 17298.45197 16347.47516 17276.64167 17296.97779 0.939687602 1.012875558 0.923574438 0.989273907 1.026902451 0.967916173 1.000085228 0.945105865 0.998824296 1 14.07823237 ELEEEEENS(ph)DEDELDSHTMVK ddPTM_A459_MK2206_30min_R2 7 ELEEEEENSDEDELDSHTMVK 21 0 A0A087WZ06;Q13188;Q13188-2;E5RFQ9 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(0.999)DEDELDS(0.001)HTMVK;ELEEEEENS(0.999)DEDELDS(0.001)HTMVK;ELEEEEENS(0.621)DEDELDS(0.354)HT(0.025)MVK 138.57 1.71E-05 99251300 319792 391138 352391 387634 388968 344453 399755 307675 309120 407085 TRUE FALSE 344275.5214 371714.6557 364139.5401 355963.0622 373695.1619 357561.4003 347266.6883 347889.1789 336006.6988 393801.8498 0.874235409 0.943912924 0.924677069 0.903914145 0.948942119 0.907972881 0.881831024 0.883411744 0.85323799 1 18.58711036 -7.000292763 24.99882665 0.894904135 0.920823206 0.005679318 0.041084291 28.16337888 2405106.074 0.013709862 0.011968642 9.99E-08 7.000292763 0.025919071 ELEEEEENSDEDELDS(ph)HTMVK ddPTM_A459_MK2206_30min_R1 1 ELEEEEENSDEDELDSHTMVK 21 0 A0A087WZ06;Q13188;Q13188-2;E5RFQ9 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 ELEEEEENS(0.003)DEDELDS(0.751)HT(0.247)MVK 124.63 0.00013306 5149600 1835.3 2117.7 1616.3 1482.2 1716.1 1554.5 1770.1 1733.2 1841.3 1604.2 TRUE FALSE 1679.198097 1979.837345 1506.590059 1596.359301 1647.744103 1642.514447 1652.019859 1718.046815 2032.709724 1802.940407 0.93136639 1.098115799 0.835629427 0.885419892 0.913920447 0.911019821 0.916291993 0.952913811 1.127441437 1 10.816136 -8.116366179 5.805066508 1.061880242 0.928138457 0.374696404 0.069374601 0.244895077 10.58239789 0.049119828 0.018066189 7.65E-09 8.116366179 -0.133741785 ELEELS(ph)LEAQGIK ddPTM_A459_MK2206_30min_R1 2 ELEELSLEAQGIK 13 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 ELEELS(1)LEAQGIK;ELEELS(1)LEAQGIK 191.49 0.00017183 7591700 2672.4 2545.5 2617.7 2055.45 2448 2255 2885.7 2388.3 3238.6 3487.6 TRUE FALSE 2445.098347 2379.787487 2440.017817 2213.761115 2350.490976 2382.676151 2693.200218 2367.419345 3575.264059 3919.670218 0.623802057 0.607139722 0.622505895 0.564782492 0.599665494 0.607876688 0.687098676 0.603984318 0.912133894 1 11.93651656 -8.344713493 3.339795728 0.996877367 0.613199339 0.952694164 0.030661485 0.046253585 0.935559384 0.03005498 0.008150424 4.52E-09 8.344713493 -0.383678028 ELEEVS(ph)PETPVVPATTQR ddPTM_A459_MK2206_30min_R1 4 ELEEVSPETPVVPATTQR 18 0 Q15149 Q15149 PLEC Plectin 1 ELEEVS(0.999)PET(0.001)PVVPATTQR;ELEEVS(1)PETPVVPATTQR;ELEEVS(1)PETPVVPATTQR;ELEEVS(1)PETPVVPATTQR 305.9 2.21E-96 68146800 10515 9597.9 10934 8647.4 11025.2 10581.5 11620.8 8927.3 10438.6 10648.4 TRUE FALSE 9620.644034 8973.074966 10191.83054 9313.424246 10586.04294 11180.61539 10845.59764 8849.249557 11523.72982 11967.60418 0.80389056 0.749780393 0.851618284 0.778219609 0.884558244 0.934240071 0.906246352 0.739433676 0.962910341 1 13.54684674 -4.43408652 0.032987709 1.565234423 2.28E-09 0.455325552 0.063924362 607.6609613 2.83769172 51.18285678 87.02338296 3.68E-05 4.43408652 -1.565234421 ELEEVS(ph)PETPVVPATTQR ddPTM_A459_MK2206_30min_R2 4 ELEEVSPETPVVPATTQR 18 0 Q15149 Q15149 PLEC Plectin 1 ELEEVS(0.588)PET(0.412)PVVPATTQR;ELEEVS(0.857)PET(0.143)PVVPATTQR;ELEEVS(0.999)PET(0.001)PVVPATTQR;ELEEVS(0.997)PET(0.003)PVVPATTQR 216 3.81E-14 54811500 128792 144975 118890 158191 126220 176074 141906 118702 148589 130622 TRUE FALSE 138652.4145 137775.7523 122853.7333 145266.2893 121263.9686 182774.6195 123273.5717 134216.759 161513.0026 126359.8148 1.097282508 1.090344683 0.972253192 1.149624107 0.95967194 1.446461596 0.975575755 1.062179136 1.278199108 1 16.9471782 ELEEWYAR ddPTM_A459_MK2206_30min_R1 3 ELEEWYAR 8 0 P09496-2;F8WF69;P09496-4;P09496-3;P09496;P09496-5;C9J8P9 P09496-2 CLTA Clathrin light chain A 0 ;; 159.2 0.0066462 56261000 10824 10496 10232.7 8206.2 10711 8658.6 10513.4 8735.3 8147.8 7748.9 FALSE TRUE 9903.361961 9812.708492 9538.132834 8838.242946 10284.35819 9148.842449 9812.070269 8658.928193 8994.792967 8708.892233 1.137155185 1.126745886 1.09521769 1.014852717 1.180903141 1.050517357 1.126672602 0.994262871 1.032828599 1 13.08827351 -7.764570768 24.99989627 1.010159282 1.1024781 0.491145264 0.044528574 71.08437927 567493.2222 0.02248241 0.011519329 1.72E-08 7.764570768 0.092318818 ELEEYRR ddPTM_A459_MK2206_30min_R1 1 ELEEYRR 7 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;H0YG19 P35611 ADD1 Alpha-adducin 0 104.21 0.02454 4831400 1756.9 1927.8 1777.6 1365.8 1998.6 1553.2 1950.8 1790 1214 1741.2 FALSE TRUE 1607.466429 1802.29987 1656.941465 1470.994153 1918.99153 1641.140842 1820.665691 1774.350219 1340.199644 1956.913001 0.821429684 0.92099131 0.846711869 0.751691134 0.98062179 0.83863761 0.930376409 0.90670879 0.684853973 1 10.9343639 -4.46008048 12.56996857 0.869972263 0.522563991 0.026165614 0.093023559 556312.3671 3947647.308 0.021973852 4641643.372 3.47E-05 4.46008048 -0.347408273 ELEEYRR ddPTM_A459_MK2206_30min_R2 1 ELEEYRR 7 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;H0YG19 P35611 ADD1 Alpha-adducin 0 101.69 0.026736 2810600 23372 28605 21565 32969 24250 20804 23482 19232 19396 20766 FALSE TRUE 25161.37829 27184.5173 22283.96634 30275.32724 23297.82315 21595.7108 20398.78519 21745.68843 21083.02902 20088.40712 1.252532276 1.353244044 1.109294839 1.507104424 1.159764585 1.075033509 1.015450606 1.082499389 1.049512233 1 14.29407555 -6.536252396 4.71035727 1.051776879 1.299790123 0.623445501 0.095239631 0.12677203 7.401050749 0.030098392 0.031351342 2.91E-07 6.536252396 0.248013244 ELEKPIQSKPQSPVIQAAAVS(ph)PK ddPTM_A459_MK2206_30min_R1 2 ELEKPIQSKPQSPVIQAAAVSPK 23 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 ELEKPIQSKPQSPVIQAAAVS(1)PK;ELEKPIQSKPQSPVIQAAAVS(1)PK 119.37 4.17E-06 88516000 17837.1 21669.4 22808.8 21497.6 13418.44 12236.08 14836.65 15931.88 19854.8 18977.2 TRUE FALSE 16319.96098 20258.71812 21260.6022 23153.34888 12883.95512 12928.87628 13846.92415 15792.58925 21918.77751 21328.23881 0.765180901 0.949854243 0.996828777 1.08557247 0.604079654 0.606185836 0.649229609 0.740454446 1.027688114 1 14.38047722 -6.260262381 24.99947385 0.743939145 0.952785153 0.223731687 0.157599372 146.4511318 3110625.926 0.049010619 0.059785382 5.49E-07 6.260262381 0.208846008 ELEKPIQSKPQSPVIQAAAVS(ph)PK ddPTM_A459_MK2206_30min_R2 2 ELEKPIQSKPQSPVIQAAAVSPK 23 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 ELEKPIQSKPQSPVIQAAAVS(1)PK;ELEKPIQSKPQSPVIQAAAVS(1)PK 126.45 3.77E-06 196900000 353140 319900 341390 262160 325120 194295 387790 264482 220457 340850 TRUE FALSE 380176.6699 304014.2312 352771.7722 240740.6894 312354.1552 201689.0324 336872.7072 299050.7055 239631.9514 329728.0924 1.153000544 0.922014952 1.069886917 0.730118831 0.947308289 0.61168289 1.021668202 0.906961561 0.726756248 1 18.33091728 -5.745206135 24.99999914 0.846712867 1.03567228 0.3161245 0.133765883 299.2604222 460872.1264 0.034607333 0.059708638 1.80E-06 5.745206135 0.188959413 ELELMFGCQVEGDAAET(ph)PPRPR ddPTM_A459_MK2206_30min_R1 1 ELELMFGCQVEGDAAETPPRPR 22 1 H3BRW9;Q02750-2;Q02750 H3BRW9 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 1 ELELMFGCQVEGDAAET(1)PPRPR 96.181 0.00028163 5389400 1064.5 1304.8 1121.7 865.04 1168.8 969.8 985.64 1053.4 1055.9 893.37 TRUE FALSE 973.9586851 1219.857283 1045.562129 931.6655307 1122.244221 1024.709238 919.889754 1044.190235 1165.664584 1004.04742 0.970032556 1.214939911 1.041347359 0.927909889 1.117720337 1.020578528 0.916181582 1.039980995 1.160965668 1 9.971611693 -5.501564027 24.84286507 1.023604984 1.101400588 0.077073134 0.089110191 1523.413953 1775576.185 0.022915946 0.046949096 3.15E-06 5.501564027 0.077795604 ELEPGCGS(ph)PGR ddPTM_A459_MK2206_30min_R2 2 ELEPGCGSPGR 11 0 A6NIX2 A6NIX2 WTIP Wilms tumor protein 1-interacting protein 1 ELEPGCGS(1)PGR;ELEPGCGS(1)PGR 85.973 0.034119 20533000 53986 56163 46668 54446 57080 55714 56891 46519 47015 60405 TRUE FALSE 58119.20967 53374.02709 48223.88783 49997.58764 54838.7524 57834.23531 49421.14336 52599.19302 51104.27972 58433.9898 0.994613065 0.913407201 0.825271182 0.855625088 0.938473525 0.989736205 0.845760208 0.900147212 0.874564271 1 15.83452018 -4.782376922 4.693824973 0.898862297 1.000038499 0.187854728 0.055489769 0.282704897 14.24066083 0.014032299 0.091285822 1.65E-05 4.782376922 0.101176202 ELEQHIQT(ph)SDPENFQSEER ddPTM_A459_MK2206_30min_R1 1 ELEQHIQTSDPENFQSEER 19 0 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 ELEQHIQT(0.874)S(0.125)DPENFQS(0.001)EER 122.18 0.00057301 10577000 3061 2956 3050.6 2346.6 2828 2836 3153.1 2936.1 2661.4 2659.7 TRUE FALSE 2800.645876 2763.563863 2843.533771 2527.335539 2715.354772 2996.571869 2942.762452 2910.429987 2938.062054 2989.203716 0.936920378 0.924515063 0.951267977 0.845487889 0.908387326 1.002464922 0.984463667 0.973647253 0.982891209 1 11.54554551 -6.755892544 24.99474545 0.986782008 0.912278146 0.658110349 0.027142167 90.79457763 409132.1156 0.009584349 0.009327295 1.75E-07 6.755892544 -0.074503862 ELEQHIQT(ph)SDPENFQSEER ddPTM_A459_MK2206_30min_R2 1 ELEQHIQTSDPENFQSEER 19 0 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 ELEQHIQT(0.945)S(0.055)DPENFQSEER 132.66 0.00032895 17022000 40477 43388 37055 45409 41178 38193 44977 35445 35714 42775 TRUE FALSE 43575.95024 41233.41501 38290.39521 41698.93944 39561.14482 39646.46138 39071.46587 40077.7832 38820.33916 41379.25525 1.053086866 0.996475523 0.925352449 1.007725712 0.956062273 0.958124092 0.944228349 0.968547717 0.938159446 1 15.33662006 -4.889296076 3.391548785 0.961602779 1.055566163 0.565130496 0.024415813 0.177730765 3.516005912 0.005838622 0.037027892 1.29E-05 4.889296076 0.093963385 ELEQHIQTS(ph)DPENFQSEER ddPTM_A459_MK2206_30min_R1 1 ELEQHIQTSDPENFQSEER 19 0 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 ELEQHIQT(0.017)S(0.983)DPENFQSEER 187.59 1.68E-15 13060000 3206 3257.8 3435.8 2172.8 3020.3 2835.4 3349.4 3129.6 2569.8 2647.2 TRUE FALSE 2933.312865 3045.716628 3202.587469 2340.149432 2899.995055 2995.937898 3125.967637 3102.238237 2836.939906 2975.155121 0.985936109 1.023716917 1.076443862 0.786563839 0.97473743 1.006985443 1.05069064 1.042714786 0.953543526 1 11.53874918 -6.782806827 5.056804084 1.016553664 0.968066717 0.071331429 0.073659481 0.52988946 35.51378299 0.027302783 0.025008317 1.65E-07 6.782806827 -0.048486947 ELEQHIQTS(ph)DPENFQSEER ddPTM_A459_MK2206_30min_R2 1 ELEQHIQTSDPENFQSEER 19 0 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 ELEQHIQT(0.269)S(0.73)DPENFQS(0.001)EER 89.043 0.0019851 21318000 24586 24354 24442 32528 30121 29083 27073 24372 26270 24107 TRUE FALSE 26468.32306 23144.61577 25256.88408 29870.35835 28938.29819 30189.77394 23518.28258 27557.50408 28554.91711 23320.39056 1.134986268 0.992462614 1.08303864 1.2808687 1.240901095 1.294565537 1.008485793 1.181691362 1.224461359 1 14.50930433 -5.574878819 11.42443968 1.184014163 1.057236586 0.185920804 0.100693771 0.892102591 193.1543051 0.027181939 0.047109415 2.66E-06 5.574878819 -0.126777577 ELES(ph)PLTPGK ddPTM_A459_MK2206_30min_R1 1 ELESPLTPGK 10 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 ELES(0.932)PLT(0.068)PGK 178.46 9.59E-05 56928000 11077 12156 10834 8057 8016 7144.6 10570 8206.5 12086 12769 TRUE FALSE 10134.84298 11364.64219 10098.61827 8677.551536 7696.705746 7549.121078 9864.894586 8134.751436 13342.38295 14350.92012 0.706215553 0.791910351 0.703691344 0.604668653 0.536321412 0.526037426 0.687405024 0.566845287 0.92972317 1 13.80885562 -8.356490617 4.778685662 0.991289134 0.640940659 0.721719327 0.080871908 0.130280753 4.656658104 0.087125819 0.022890447 4.40E-09 8.356490617 -0.350348475 ELES(ph)PLTPGK ddPTM_A459_MK2206_30min_R2 2 ELESPLTPGK 10 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 ELES(0.988)PLT(0.012)PGK;ELES(0.624)PLT(0.376)PGK 166.69 0.00031852 26618500 337397 273247 310998 303085 270969 199025 313189 265324 215017 325651 TRUE FALSE 363228.3737 259677.9513 321366.5181 278321.986 260329.3956 206599.0358 272066.9081 300002.7578 233718.79 315025.0345 1.153014313 0.824308937 1.020130094 0.883491645 0.826376849 0.655817834 0.863635833 0.952314022 0.74190545 1 18.26510696 -1.522878749 0.934834594 0.8454275 177.5641749 0.362793009 0.109428522 1211.136995 2.249914722 0.035278211 457411.1284 0.03 1.522878749 176.7187474 ELES(ph)SEEGGSAEER ddPTM_A459_MK2206_30min_R1 2 ELESSEEGGSAEER 14 0 J3QKQ1;J3KRR1;J9JIC5;Q9HAS0 J3QKQ1 C17orf75 Protein Njmu-R1 1 ELES(0.97)S(0.03)EEGGSAEER;ELES(0.992)S(0.008)EEGGSAEER 209.11 5.45E-06 6109900 1562.29 1573.42 1367.73 1370.4 1361.05 1117.77 1328.16 1559.64 1238.34 1834.59 TRUE FALSE 1429.409032 1470.990072 1274.892298 1475.948445 1306.836496 1181.057171 1239.56087 1546.004232 1367.069874 2061.87286 0.693257601 0.713424237 0.61831761 0.715829028 0.633810417 0.572807953 0.60118201 0.749805801 0.663023362 1 11.00973966 -9.457825882 0.969668489 1.003252369 0.656063501 0.783537158 0.053285782 2.982872103 2.680950474 0.085911881 0.01733378 3.48E-10 9.457825882 -0.347188868 ELES(ph)SEEGGSAEER ddPTM_A459_MK2206_30min_R2 2 ELESSEEGGSAEER 14 0 J3QKQ1;J3KRR1;J9JIC5;Q9HAS0 J3QKQ1 C17orf75 Protein Njmu-R1 1 ELES(0.994)S(0.006)EEGGSAEER;ELES(0.994)S(0.006)EEGGSAEER 181.75 7.52E-05 9739900 17459.2 18810.2 17210.6 17855.5 22739 16498.5 19269.1 15999.3 21420 16300.6 TRUE FALSE 18795.88978 17876.11282 17784.39281 16396.64853 21846.15261 17126.36198 16739.04402 18090.46344 23283.07288 15768.71276 1.191973629 1.133644394 1.127827812 1.039821626 1.385411285 1.086097657 1.061535224 1.147237807 1.476536052 1 13.94477727 ELESPLT(ph)PGK ddPTM_A459_MK2206_30min_R1 1 ELESPLTPGK 10 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 ELES(0.122)PLT(0.878)PGK 142.89 0.0026879 46616000 8419.6 9609.1 9347 6326.7 6520.6 6130.8 7245 6049.6 9614.3 9985 TRUE FALSE 7703.468807 8983.545843 8712.551682 6813.98353 6260.870694 6477.920598 6761.699269 5996.708985 10613.74089 11222.01718 0.686460258 0.800528612 0.776380177 0.607197745 0.557909562 0.577250996 0.602538667 0.53436997 0.945796172 1 13.45404441 -8.345873652 5.880421092 0.988695051 0.645357463 0.708516166 0.08477485 0.148730093 7.964271266 0.093457349 0.024377829 4.51E-09 8.345873652 -0.343337588 ELESPLT(ph)PGK ddPTM_A459_MK2206_30min_R2 3 ELESPLTPGK 10 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 ELES(0.027)PLT(0.973)PGK;ELES(0.024)PLT(0.976)PGK;ELES(0.002)PLT(0.998)PGK 152.96 0.0014355 140834000 433711 367570 393342 337318 346510 252820 424175 326695 255052 399598 TRUE FALSE 466916.2476 349317.0083 406455.826 309758.0404 332904.2763 262441.2423 368480.313 369395.1582 277235.9619 386559.15 1.207877883 0.903657327 1.051471233 0.801321196 0.861198801 0.67891613 0.953231383 0.95559802 0.717188979 1 18.56032966 -1.522900901 0.825090277 0.855301132 101.46487 0.439819957 0.11239478 529.1543019 1.647384981 0.038468288 99734.68369 0.02999847 1.522900901 100.6095688 ELESPLT(ph)PGKVCR ddPTM_A459_MK2206_30min_R1 1 ELESPLTPGKVCR 13 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 ELES(0.151)PLT(0.849)PGKVCR 153.32 0.004299 6551600 5015.3 5452 5744.8 5466.3 4793 3406 3890.2 5302.9 3467.7 2842.7 TRUE FALSE 4588.722399 5097.073809 5354.858982 5887.315373 4602.084661 3598.844777 3630.691856 5256.537304 3828.179824 3194.875137 1.436275974 1.595390615 1.676077703 1.842737234 1.440458379 1.126443013 1.13641119 1.645302892 1.198225176 1 11.64154383 -6.518875714 7.132148577 1.258419018 1.638483269 0.528529632 0.18393894 0.118141652 37.60036674 0.06078857 0.064097054 3.03E-07 6.518875714 0.380064251 ELESQISELQEDLESER ddPTM_A459_MK2206_30min_R1 2 ELESQISELQEDLESER 17 0 P35579 P35579 MYH9 Myosin-9 0 ; 372.76 6.58E-221 10803800 2605.2 2336.9 2331.46 2515.4 2915.5 2445.3 2855.8 2741.3 2122.61 2620.4 FALSE TRUE 2383.61406 2184.767385 2173.206991 2709.136544 2799.369461 2583.750773 2665.294793 2717.333103 2343.262905 2945.034935 0.80936699 0.741847697 0.737922313 0.919899629 0.950538626 0.87732432 0.905012963 0.922682808 0.795665572 1 11.52406903 -5.763855189 24.99855353 0.907038783 0.760925852 0.622820581 0.052416505 39.03915563 403980.4905 0.014116456 0.02210091 1.72E-06 5.763855189 -0.14611293 ELEVQHPAAK ddPTM_A459_MK2206_30min_R1 1 ELEVQHPAAK 10 0 P50990-2;P50990;H7C4C8 P50990-2 CCT8 T-complex protein 1 subunit theta 0 92.239 0.037803 5250800 8469.4 9285.2 9214.7 8013.5 8987.2 8823.7 8549 8314.7 7763.7 6775.7 FALSE TRUE 7749.033055 8680.731792 8589.231838 8630.701158 8629.220793 9323.290269 7978.711809 8242.005455 8570.764398 7615.12487 1.017584503 1.139932955 1.127917399 1.133363051 1.133168653 1.224312198 1.047745368 1.08232046 1.125492299 1 12.89465198 -9.437478455 0.648496213 0.995188787 1.122427443 0.28719502 0.053679553 5.003891553 2.537341432 0.120854486 0.021056658 3.65E-10 9.437478455 0.127238656 ELFDDPS(ph)YVNVQNLDK ddPTM_A459_MK2206_30min_R1 1 ELFDDPSYVNVQNLDK 16 0 P29353-3;Q5T188;H0Y539;X6R6D0;P29353-5;P29353-2;P29353-7;P29353;P29353-6 P29353-3 SHC1 SHC-transforming protein 1 1 ELFDDPS(0.901)Y(0.099)VNVQNLDK 273.27 9.44E-51 3643100 1211.3 1305.4 1214.6 885.17 1016 1240.5 1494.7 1180.8 979.66 1018.7 TRUE FALSE 1108.272574 1220.418223 1132.156336 953.3459468 975.5305686 1310.736038 1394.99129 1170.47639 1081.499163 1144.904247 0.968004597 1.065956586 0.988865522 0.832686183 0.852063019 1.144843372 1.218434899 1.022335617 0.944619749 1 10.16101123 -6.768122433 24.99998587 1.07696696 0.94501311 0.298938981 0.094541386 219.1538746 819805.9978 0.036649297 0.033051828 1.71E-07 6.768122433 -0.131953851 ELFDDPS(ph)YVNVQNLDK ddPTM_A459_MK2206_30min_R2 2 ELFDDPSYVNVQNLDK 16 0 P29353-3;Q5T188;H0Y539;X6R6D0;P29353-5;P29353-2;P29353-7;P29353;P29353-6 P29353-3 SHC1 SHC-transforming protein 1 1 ELFDDPS(0.975)Y(0.025)VNVQNLDK;ELFDDPS(0.5)Y(0.5)VNVQNLDK 192.18 1.10E-06 5219900 59540 62868 54524 54347 59791 49499 74556 49752 47933 59410 TRUE FALSE 64098.42818 59746.06654 56341.80295 49906.67625 57443.30491 51382.71913 64766.70764 56254.75722 52102.1257 57471.45657 1.11530892 1.039578081 0.980344093 0.868373263 0.999510163 0.894056323 1.126936944 0.978829502 0.906573955 1 15.81055799 -4.977884517 2.409768481 0.969082244 1.121045255 0.315563061 0.068356596 0.465837104 4.493267691 0.018459294 0.124788933 1.05E-05 4.977884517 0.151963011 ELFDDPSY(ph)VNVQNLDK ddPTM_A459_MK2206_30min_R1 2 ELFDDPSYVNVQNLDK 16 0 P29353-3;Q5T188;H0Y539;X6R6D0;P29353-5;P29353-2;P29353-7;P29353;P29353-6 P29353-3 SHC1 SHC-transforming protein 1 1 ELFDDPS(0.343)Y(0.657)VNVQNLDK;ELFDDPS(0.389)Y(0.611)VNVQNLDK 257.2 9.14E-38 15302600 6256.6 6401.9 6184.2 5752.7 5273.5 6249.3 6419.7 6252.2 5518.6 5223.7 TRUE FALSE 5724.443315 5985.135146 5764.433734 6195.773951 5063.445328 6603.129965 5991.453526 6197.537675 6092.278219 5870.851393 0.975061866 1.0194663 0.981873556 1.055345049 0.862472066 1.12473124 1.020542529 1.055645469 1.037716306 1 12.51935402 ELFQT(ph)PDHTEESTTDDK ddPTM_A459_MK2206_30min_R2 3 ELFQTPDHTEESTTDDK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(1)PDHTEESTTDDK;ELFQT(1)PDHTEESTTDDK;ELFQT(1)PDHTEESTTDDK 118.19 0.0021069 12150800 80406 61946 52128.9 61509 52967 42328.3 71546 58020 32894.2 66820 TRUE FALSE 86561.94518 58869.85172 53866.85151 56483.51794 50887.24944 43939.13312 62151.92426 65603.41321 35755.27806 64639.66887 1.339145863 0.910738758 0.833340462 0.873821276 0.787244897 0.679754923 0.961513655 1.014909488 0.553147605 1 15.98013219 -4.747333316 3.165296531 0.837536766 1.43764067 0.549799083 0.135262387 0.30041248 4.232803208 0.033419125 0.472597943 1.79E-05 4.747333316 0.600103904 ELFQT(ph)PDHTEESTTDDKTTK ddPTM_A459_MK2206_30min_R2 1 ELFQTPDHTEESTTDDKTTK 20 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.934)PDHT(0.015)EES(0.03)T(0.012)T(0.009)DDKTTK 59.579 0.018163 8254700 34662 40498 27776 41979 39298 28913 45504 37175 26594 37590 TRUE FALSE 37315.74937 38486.92821 28702.03798 38549.18142 37754.96306 30013.30448 39529.27014 42033.90014 28907.09805 36363.44138 1.02618861 1.058396201 0.789310277 1.060108173 1.038267052 0.825370299 1.087060758 1.155938452 0.794949459 1 15.15020112 ELFQT(ph)PGHTEEAVAAGK ddPTM_A459_MK2206_30min_R1 2 ELFQTPGHTEEAVAAGK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(1)PGHTEEAVAAGK;ELFQT(1)PGHTEEAVAAGK 123.61 0.001821 18444400 9821.6 10394.2 8484.9 7935.3 8439.5 8694.7 7345.3 6436.2 6571.4 5599.5 TRUE FALSE 8986.221345 9717.535691 7908.968628 8546.478181 8103.336844 9186.9864 6855.308439 6379.928982 7254.520546 6293.208334 1.427923702 1.544130621 1.256746672 1.358047871 1.287632065 1.459825563 1.089318528 1.013780038 1.152753915 1 12.61957999 -7.299427597 7.94270989 1.064056852 1.384014373 0.772703662 0.086356672 0.147794139 27.95928889 0.03692609 0.025043892 5.02E-08 7.299427597 0.319957521 ELFQT(ph)PGHTEEAVAAGK ddPTM_A459_MK2206_30min_R2 4 ELFQTPGHTEEAVAAGK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.999)PGHT(0.001)EEAVAAGK;ELFQT(1)PGHTEEAVAAGK;ELFQT(1)PGHTEEAVAAGK;ELFQT(0.999)PGHT(0.001)EEAVAAGK 111.4 0.0027529 23415800 181734 211100 170049 217242 182268 183403 198394 168304 121306 175863 TRUE FALSE 195647.6948 200617.081 175718.3488 199492.6337 175111.2425 190382.5297 172344.6295 190301.9107 131856.9766 170124.6047 1.15002586 1.179236133 1.032880277 1.172626582 1.029311679 1.119076985 1.013049404 1.118603103 0.775061178 1 17.37623228 -8.24489727 24.85858115 0.887530588 1.099687047 0.562481315 0.075588811 445.0122422 668742.8879 0.04821243 0.018110059 5.69E-09 8.24489727 0.212156459 ELFQT(ph)PGHTEELVAAGK ddPTM_A459_MK2206_30min_R1 1 ELFQTPGHTEELVAAGK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.985)PGHT(0.015)EELVAAGK 92.439 0.028096 0 429.57 389.53 327.6 351.25 295.96 396.51 435.1 319.17 398.07 339.4 TRUE FALSE 393.0328157 364.1715262 305.3634247 378.3033359 284.1712865 418.9600535 406.0752729 316.3795303 439.450801 381.4474343 1.030372157 0.954709597 0.800538678 0.991757453 0.744981512 1.098342827 1.064564174 0.829418425 1.152061232 1 8.575340449 -6.793805539 24.99999288 1.020446364 0.906337628 0.235351227 0.111578109 320.2529365 247364.8681 0.038370713 0.033842394 1.61E-07 6.793805539 -0.114108736 ELFQT(ph)PGHTEELVAAGK ddPTM_A459_MK2206_30min_R2 2 ELFQTPGHTEELVAAGK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(1)PGHTEELVAAGK;ELFQT(0.992)PGHT(0.008)EELVAAGK 129.51 0.0012647 16965700 126090 130381 110898 140090 112903 109624 138750 103892 74331 108015 TRUE FALSE 135743.5473 123906.4691 114595.284 128644.1989 108469.8609 113795.8181 120531.9583 117471.0411 80796.17602 104490.4794 1.29909967 1.185815874 1.096705505 1.231157131 1.038083676 1.089054417 1.153520962 1.124227219 0.773239595 1 16.67301197 -5.357286391 0.241885537 0.936879896 1.439087661 0.46789008 0.10012124 7.827497907 0.506200599 0.165840278 1.167704474 4.39E-06 5.357286391 0.502207764 ELFQT(ph)PGPSEESMTDEK ddPTM_A459_MK2206_30min_R1 3 ELFQTPGPSEESMTDEK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.954)PGPS(0.045)EES(0.001)MTDEK;ELFQT(0.999)PGPS(0.001)EESMTDEK;ELFQT(0.988)PGPS(0.012)EESMTDEK 153.75 0.00026533 6773000 4774.14 4690.77 3577.27 3098.84 3449.31 3515.86 3289.41 3229.88 3429.16 2559.55 TRUE FALSE 4368.074323 4385.40002 3334.454879 3337.513194 3311.916679 3714.924955 3069.979461 3201.6415 3785.633453 2876.646378 1.518460648 1.524483529 1.159146604 1.160209757 1.151311716 1.291408281 1.067207803 1.112977085 1.315988466 1 11.49017217 -5.26137905 24.99104691 1.162780843 1.52147212 0.730256605 0.0884869 2.416835111 1000580.875 0.021901575 0.050954161 5.48E-06 5.26137905 0.358691278 ELFQT(ph)PGPSEESMTDEK ddPTM_A459_MK2206_30min_R2 3 ELFQTPGPSEESMTDEK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.936)PGPS(0.048)EES(0.008)MT(0.008)DEK;ELFQT(0.739)PGPS(0.236)EES(0.013)MT(0.013)DEK;ELFQT(0.999)PGPS(0.001)EESMTDEK 136.26 0.00091086 0 42351 42892 30446.9 40668 33741 32003.3 44103 30084.5 24193.5 34043.3 TRUE FALSE 45593.42512 40762.04565 31461.98445 37345.29431 32416.15881 33221.20801 38312.22312 34016.64745 26297.8069 32932.46991 1.384452039 1.237746387 0.955348461 1.133996157 0.984322126 1.008767581 1.163357113 1.032921234 0.798537339 1 15.0072231 -5.050937999 3.190836864 1.019959779 1.373995208 0.62902352 0.095147296 0.164251427 3.190257953 0.02498037 0.103098964 8.89E-06 5.050937999 0.354035429 ELFQT(ph)PGTDKPTTDEK ddPTM_A459_MK2206_30min_R2 2 ELFQTPGTDKPTTDEK 16 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.973)PGT(0.027)DKPTTDEK;ELFQT(0.934)PGT(0.066)DKPTTDEK 95.428 0.012044 21186000 95530 103509 82136 105141 101833 71624 115271 72741 65086 80050 TRUE FALSE 102843.8503 98368.89358 84874.37325 96550.64397 97834.52475 74349.70151 100135.7792 82248.49846 70747.06263 77437.97506 1.328080314 1.270292689 1.09603038 1.246812612 1.263392085 0.960119392 1.293109475 1.062120986 0.913596496 1 16.24075361 -7.060475036 0.363582427 0.95780567 1.305906869 0.449155441 0.108453323 1.518583272 0.462154224 0.128910199 0.193150849 8.70E-08 7.060475036 0.348101199 ELFQT(ph)PICTDKPTTHEK ddPTM_A459_MK2206_30min_R2 3 ELFQTPICTDKPTTHEK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(1)PICTDKPTTHEK;ELFQT(0.995)PICT(0.005)DKPTTHEK;ELFQT(0.5)PICT(0.499)DKPT(0.001)T(0.001)HEK 67.928 0.021422 24971500 171339 163327 131024 186156 146020 137802 172847 149658 77764 147183 TRUE FALSE 184456.8456 155216.4187 135392.2748 170946.4593 140286.5211 143046.1517 150151.9813 169218.8145 84527.77215 142380.4308 1.295521053 1.090152754 0.950919126 1.200631705 0.985293557 1.004675649 1.054582996 1.1884977 0.593675491 1 17.11939135 -1.522878745 0.332893361 0.958999372 3.840072608 0.255459572 0.156444503 94.2148049 1.33968411 0.13764468 167.4984296 0.03 1.522878745 2.881073236 ELFQT(ph)PVCTDKPTTHEK ddPTM_A459_MK2206_30min_R2 2 ELFQTPVCTDKPTTHEK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.999)PVCT(0.001)DKPTTHEK;ELFQT(0.991)PVCT(0.009)DKPTTHEK 108.45 0.0013283 21041400 184752 190120 156224 202770 156712 143746 185509 146247 88160 167386 TRUE FALSE 198896.7552 180678.9173 161432.4302 186203.0424 150558.6995 149216.3548 161151.4455 165361.985 95827.99744 161924.2085 1.228332422 1.115823995 0.99696291 1.149939494 0.929809698 0.921519741 0.995227625 1.021230775 0.591807725 1 17.30495917 -5.145951084 0.401963089 0.871616644 1.371173824 0.427166481 0.123434819 4.314428462 0.684682755 0.104631098 1.010359621 7.15E-06 5.145951084 0.49955718 ELFQTPCTDNPTT(ph)DEK ddPTM_A459_MK2206_30min_R1 1 ELFQTPCTDNPTTDEK 16 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.229)PCT(0.241)DNPT(0.097)T(0.433)DEK 115.56 0.0046554 5426300 689.96 864.36 486.35 516.37 700.02 691.34 587.06 336.67 528.06 511.34 TRUE FALSE 631.2752789 808.0900069 453.337917 556.1409069 672.1367211 730.4830734 547.8982986 333.7265297 582.9537267 574.6886596 1.098464827 1.406135293 0.788840896 0.967725563 1.169566703 1.271093593 0.953382826 0.580708396 1.014381817 1 9.16663677 -7.518354998 24.98272657 0.831936176 1.110926075 0.261201464 0.191125255 250.0568903 1380981.745 0.088486444 0.052776449 3.03E-08 7.518354998 0.278989899 ELGEYGFHEYT(ph)EVK ddPTM_A459_MK2206_30min_R1 1 ELGEYGFHEYTEVK 14 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 ELGEYGFHEYT(1)EVK 96.096 0.016318 5497800 3017.8 3671.3 3973.4 3096.4 3277.7 3174 3396.1 3465.3 3595.5 3895.8 TRUE FALSE 2761.120263 3432.297703 3703.696679 3334.885265 3147.142268 3353.709137 3169.552366 3435.003247 3969.265092 4378.441116 0.630617197 0.783908613 0.845893911 0.761660412 0.718781453 0.76595963 0.723899735 0.784526537 0.906547556 1 12.09620159 -8.392974872 2.166840141 0.998059775 0.7521586 0.721784794 0.051962896 0.159486512 1.518192669 0.050556311 0.014189919 4.05E-09 8.392974872 -0.245901175 ELGEYGFHEYTEVK ddPTM_A459_MK2206_30min_R1 2 ELGEYGFHEYTEVK 14 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 183.96 0.00010912 148161000 23294 29011 27456 25730 23696 24692 26559 24911 20419.7 23085 FALSE TRUE 21312.72298 27122.37863 25592.36322 27711.72906 22752.13814 26090.0397 24787.29757 24693.20575 22542.40089 25944.94408 0.821459584 1.045382042 0.986410421 1.068097467 0.876939186 1.005592443 0.955380651 0.951754056 0.86885525 1 14.66316581 -7.803890277 3.056280049 0.929372868 0.972223366 0.019294187 0.075289348 0.855874771 16.07989471 0.044823536 0.019994692 1.57E-08 7.803890277 0.042850498 ELGEYGFHEYTEVK ddPTM_A459_MK2206_30min_R2 2 ELGEYGFHEYTEVK 14 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 138.55 0.00081195 35545000 257320 274280 271670 309090 283450 244330 313840 289880 239602 307450 FALSE TRUE 277020.617 260659.654 280727.3422 283836.3583 272320.3288 253628.1494 272632.431 327768.3113 260442.1489 297417.9317 0.931418679 0.87640867 0.943881697 0.954335055 0.915615031 0.852766839 0.916664404 1.102046233 0.875677359 1 18.18213211 -7.571142473 24.99984466 0.99518833 0.911789234 0.282762983 0.058051777 139.3363123 72172.42678 0.025853476 0.014926514 2.68E-08 7.571142473 -0.083399096 ELGITALHIK ddPTM_A459_MK2206_30min_R1 2 ELGITALHIK 10 0 P62263;A0A2R8Y811;E5RH77 P62263 RPS14 40S ribosomal protein S14 0 ; 119.22 0.0076812 19131200 11400 11613.7 11208.6 10194.7 10383.1 11225.9 11521.2 9516.9 10327.9 9423.5 FALSE TRUE 10430.37014 10857.64602 10447.79146 10979.89756 9969.51914 11861.50076 10752.64177 9433.694747 11401.52216 10590.95432 0.984837609 1.025181083 0.986482534 1.036724097 0.941323967 1.119965245 1.015266561 0.890731322 1.076533976 1 13.37054497 -4.725832385 21.92231452 1.008347492 0.984836835 0.014564187 0.060924436 7694.79986 4736196.038 0.014669759 2.174890103 1.88E-05 4.725832385 -0.023510657 ELGITALHIK ddPTM_A459_MK2206_30min_R2 2 ELGITALHIK 10 0 P62263;A0A2R8Y811;E5RH77 P62263 RPS14 40S ribosomal protein S14 0 ; 131.52 0.0036479 9026100 91221 105293 88871 107480 92821 97249 115807 97323 76998 103906 FALSE TRUE 98204.9499 100064.3027 91833.91478 98698.54019 89176.38115 100949.8788 100601.4018 110043.4503 83695.14686 100515.5557 0.977012455 0.995510615 0.913628882 0.981923041 0.887189853 1.004320954 1.000854057 1.094790249 0.832658649 1 16.61705926 ELGLGCSPPAET(ph)LADAK ddPTM_A459_MK2206_30min_R1 1 ELGLGCSPPAETLADAK 17 0 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 ELGLGCS(0.455)PPAET(0.545)LADAK 138.39 0.0011905 3042800 870.14 904.19 1042.4 627.49 616.4 711.88 981.8 777.6 863.95 1154.2 TRUE FALSE 796.1300237 845.3270667 971.6447923 675.8193885 591.8474828 752.1860304 916.3059134 770.8015252 953.7606942 1297.19101 0.613733843 0.651659671 0.749037563 0.520986796 0.456253149 0.579857573 0.706377015 0.594208192 0.735250774 1 10.34117521 -8.81381539 1.217052154 1.000540593 0.604234036 0.689176849 0.079850245 0.633051523 1.642903259 0.08376786 0.025556422 1.54E-09 8.81381539 -0.396306557 ELGTGEQPLS(ph)PTTATSPYGGGHALAGQTSPK ddPTM_A459_MK2206_30min_R1 2 ELGTGEQPLSPTTATSPYGGGHALAGQTSPK 31 0 H7BY14;A0A087WYU3;Q96NU1-6;Q96NU1;H7C3J6;A0A087X1J5;Q96NU1-1;Q96NU1-2;A0A087WXB3;A0A087X223;A0A087WYW1;Q96NU1-4;Q96NU1-5 H7BY14;A0A087WXB3 SAMD11 Sterile alpha motif domain-containing protein 11 1 ELGTGEQPLS(0.417)PT(0.417)T(0.165)AT(0.001)SPYGGGHALAGQTSPK;ELGT(0.021)GEQPLS(0.636)PT(0.217)T(0.11)AT(0.012)S(0.003)PY(0.001)GGGHALAGQTSPK 148.14 4.95E-20 27825000 4923.4 3464.51 3504.4 2801.87 4512.8 3856.54 3910.6 3539.69 2699.02 2367.53 TRUE FALSE 4504.638976 3238.969769 3266.531092 3017.670513 4333.04562 4074.893962 3649.731009 3508.742864 2979.592788 2660.83749 1.692940284 1.217274554 1.227632692 1.13410553 1.628451807 1.531432858 1.371647469 1.318661089 1.119795101 1 11.37766469 -8.322086707 2.013076744 1.002926437 1.389993275 0.391180976 0.170510938 0.356826953 2.771748712 0.169002644 0.048606641 4.76E-09 8.322086707 0.387066838 ELGTGEQPLS(ph)PTTATSPYGGGHALAGQTSPK ddPTM_A459_MK2206_30min_R2 4 ELGTGEQPLSPTTATSPYGGGHALAGQTSPK 31 0 H7BY14;A0A087WYU3;Q96NU1-6;Q96NU1;H7C3J6;A0A087X1J5;Q96NU1-1;Q96NU1-2;A0A087WXB3;A0A087X223;A0A087WYW1;Q96NU1-4;Q96NU1-5 H7BY14;A0A087WXB3 SAMD11 Sterile alpha motif domain-containing protein 11 1 ELGT(0.014)GEQPLS(0.447)PT(0.19)T(0.19)AT(0.139)S(0.02)PY(0.001)GGGHALAGQTSPK;ELGT(0.002)GEQPLS(0.702)PT(0.235)T(0.048)AT(0.012)S(0.002)PYGGGHALAGQTSPK;ELGTGEQPLS(0.9)PT(0.08)T(0.019)ATSPYGGGHALAGQTSPK;ELGTGEQPLS(0.906)PT(0.085)T(0.008)ATSPYGGGHALAGQTSPK 143.81 3.53E-19 67374800 247654 388262 312918 441947 349475 369202 338213 271821 302542 244591 TRUE FALSE 266614.5807 368981.4737 323350.5299 405838.5164 335752.8555 383252.2408 293805.2268 307348.938 328856.5563 236610.0157 1.126810207 1.559449935 1.366596968 1.715221206 1.419013707 1.619763389 1.241727769 1.298968419 1.389867438 1 17.85215162 -8.915274454 0.618536836 0.995510335 1.463719292 0.373947553 0.165528857 1.490300865 1.073767541 0.191970088 0.067933338 1.22E-09 8.915274454 0.468208957 ELGTGEQPLSPTTAT(ph)SPYGGGHALAGQTS(ph)PK ddPTM_A459_MK2206_30min_R2 1 ELGTGEQPLSPTTATSPYGGGHALAGQTSPK 31 0 H7BY14;A0A087WYU3;Q96NU1-6;Q96NU1;H7C3J6;A0A087X1J5;Q96NU1-1;Q96NU1-2;A0A087WXB3;A0A087X223;A0A087WYW1;Q96NU1-4;Q96NU1-5 H7BY14;A0A087WXB3 SAMD11 Sterile alpha motif domain-containing protein 11 2 ELGT(0.002)GEQPLS(0.083)PT(0.045)T(0.052)AT(0.773)S(0.044)PY(0.001)GGGHALAGQT(0.159)S(0.841)PK 89.792 2.33E-06 6919000 21802 21831 19731 19364 14553 10867 19331 16159 12470 22355 TRUE FALSE 23471.17788 20746.90429 20388.82169 17781.89926 13981.5761 11280.5513 16792.81648 18271.03678 13554.61806 21625.55818 1.085344373 0.959369655 0.94281135 0.822263135 0.646530183 0.521630527 0.776526383 0.844881627 0.626786969 1 14.40044975 -5.765896312 2.115981323 0.7204143 1.015537745 0.458906222 0.126600146 0.273184795 2.496188245 0.038536005 0.07409818 1.71E-06 5.765896312 0.295123446 ELHINLIPNKQDR ddPTM_A459_MK2206_30min_R1 1 ELHINLIPNKQDR 13 1 P07900;P07900-2;G3V2J8 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 71.976 0.044799 36604000 8338.6 8195.5 8259 8264.8 8885 7560.8 8489.9 8791.8 6783 6052 FALSE TRUE 7629.358282 7661.97146 7698.402091 8901.356328 8531.091636 7988.885962 7923.554262 8714.93422 7488.117123 6801.76745 1.121672909 1.126467718 1.131823772 1.308682838 1.254246297 1.174530888 1.164925781 1.281274946 1.100907548 1 12.73169397 -8.526901958 7.538400313 1.000008615 1.194927667 0.496508887 0.062665501 0.091313893 58.22849672 0.064674353 0.01672339 2.97E-09 8.526901958 0.194919052 ELHIQGNR ddPTM_A459_MK2206_30min_R1 1 ELHIQGNR 8 0 Q15404-2;Q15404 Q15404-2 RSU1 Ras suppressor protein 1 0 95.909 0.030216 2677600 2567.2 2456.4 2281.9 2383.6 3186.1 2479.5 2833.1 2662.2 1433.3 2295 FALSE TRUE 2348.846159 2296.487914 2127.010986 2567.185285 3059.19089 2619.887147 2644.109068 2638.924666 1582.296664 2579.321926 0.910644823 0.890345594 0.824639594 0.995294639 1.186044619 1.015727087 1.025117897 1.02310791 0.613454508 1 11.33277613 -5.777796608 24.22628064 0.992759934 0.876723576 0.10400075 0.137052876 347.69116 514955.7422 0.039623985 0.058989862 1.67E-06 5.777796608 -0.116036359 ELHPQLLS(ph)PTK ddPTM_A459_MK2206_30min_R1 4 ELHPQLLSPTK 11 0 E9PK89;Q8TBN0 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 1 ELHPQLLS(0.999)PT(0.001)K;ELHPQLLS(0.97)PT(0.03)K;ELHPQLLS(0.992)PT(0.008)K;ELHPQLLS(0.963)PT(0.037)K 108.36 0.0066265 76270800 43145.8 40499 41654.8 38975.1 34909.6 33898.7 36903.8 35902.6 35590.3 32941.1 TRUE FALSE 39476.02314 37862.50774 38827.38823 41976.96896 33519.07671 35818.0151 34442.01484 35588.70735 39290.03905 37022.09216 1.066282882 1.02270038 1.04876267 1.133835678 0.905380403 0.967476796 0.930309791 0.961282987 1.061259285 1 15.17609881 -6.264727862 24.99974529 0.966809869 1.063300562 0.504114818 0.046907283 251.3402794 1910742.253 0.014553805 0.017208437 5.44E-07 6.264727862 0.096490693 ELHPQLLS(ph)PTK ddPTM_A459_MK2206_30min_R2 3 ELHPQLLSPTK 11 0 E9PK89;Q8TBN0 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 1 ELHPQLLS(0.999)PT(0.001)K;ELHPQLLS(0.973)PT(0.027)K;ELHPQLLS(0.678)PT(0.322)K 136.14 0.0009527 110294300 851065 803711 742396 781203 843057 613251 902495 652327 589818 882434 TRUE FALSE 916223.1908 763799.8804 767147.1121 717376.216 809954.3462 636588.6965 783996.3224 737588.3787 641119.3035 853640.2508 1.073313014 0.894756169 0.898677296 0.840372997 0.948823987 0.745734161 0.918415365 0.864050609 0.751041557 1 19.70326868 ELHPQLLSPT(ph)K ddPTM_A459_MK2206_30min_R2 2 ELHPQLLSPTK 11 0 E9PK89;Q8TBN0 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 1 ELHPQLLS(0.01)PT(0.99)K;ELHPQLLS(0.388)PT(0.612)K 109.1 0.012999 12852700 104728 109471 95425 99499 117841 92142 114435 90149 87449 105365 TRUE FALSE 112746.0562 104034.8293 98606.42187 91369.61342 113213.9702 95648.52838 99409.54704 101931.7838 95055.15595 101926.9487 1.106145702 1.020680308 0.967422484 0.896422532 1.110736382 0.938402744 0.975301903 1.000047437 0.932581198 1 16.63717601 -4.840442951 2.729548368 0.978355704 1.121670313 0.345478349 0.053922073 0.434499932 4.838289334 0.013561438 0.13444432 1.44E-05 4.840442951 0.143314609 ELHYLPFPS(ph)P ddPTM_A459_MK2206_30min_R1 2 ELHYLPFPSP 10 0 Q8N565 Q8N565 MREG Melanoregulin 1 ELHYLPFPS(1)P;ELHYLPFPS(1)P 100.88 0.016955 4219400 3929.8 3352.4 3096.1 2964.5 4275 4295.9 5760.5 5252.5 4726.3 4868.1 TRUE FALSE 3595.549874 3134.158151 2885.945358 3192.826304 4104.717698 4539.130146 5376.227556 5206.577946 5217.615798 5471.19698 0.657177924 0.572846886 0.527479703 0.583569978 0.750241257 0.829641148 0.982641929 0.951634161 0.953651608 1 12.41764078 -6.707729419 1.463473889 0.970677983 0.576440595 0.950832324 0.039214876 0.081283751 0.362668837 0.01807552 0.017130989 1.96E-07 6.707729419 -0.394237388 ELHYLPFPS(ph)P ddPTM_A459_MK2206_30min_R2 3 ELHYLPFPSP 10 0 Q8N565 Q8N565 MREG Melanoregulin 1 ELHYLPFPS(1)P;ELHYLPFPS(1)P;ELHYLPFPS(1)P 99.788 0.015199 727430 28673.7 28963 28135.3 26838 29266.3 38093.6 43032.4 25885.5 41349.6 38102.7 TRUE FALSE 30868.98052 27524.73954 29073.31686 24645.24955 28117.15801 39543.27864 37382.19419 29268.82373 44946.11347 36859.41202 0.837478919 0.746749284 0.788762361 0.668628396 0.762821664 1.072813604 1.014183139 0.794066485 1.219393121 1 15.16974544 -6.750983006 24.67968493 1.006851162 0.756525589 0.602103592 0.105050913 126.5094406 298593.599 0.033752426 0.03339578 1.77E-07 6.750983006 -0.250325573 ELILFSNSDNER ddPTM_A459_MK2206_30min_R2 1 ELILFSNSDNER 12 0 Q02880;Q02880-2;E9PCY5;P11388;P11388-2;P11388-3;P11388-4 Q02880;P11388 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha 0 163.46 0.0069402 2511700 13345 13119 11617 15704 12897 11105 14302 12987 9569.5 12157 FALSE TRUE 14366.70346 12467.52954 12004.30498 14420.93297 12390.59898 11527.60856 12424.13022 14684.44549 10401.83781 11760.31809 1.221625415 1.060135402 1.020746624 1.226236643 1.053593864 0.98021231 1.056445083 1.248643564 0.884486094 1 13.52163946 -1.522878746 0.116539732 0.971095613 1.506550486 0.158843871 0.104327208 234.6140989 1.896941939 0.799534094 20.31382395 0.03 1.522878746 0.535454873 ELILGSETPSS(ph)PR ddPTM_A459_MK2206_30min_R1 4 ELILGSETPSSPR 13 0 R4GNJ5;A0A590TQL1;Q96AP0-2;Q96AP0 R4GNJ5 ACD Adrenocortical dysplasia protein homolog 1 ELILGS(0.002)ET(0.018)PS(0.067)S(0.912)PR;ELILGSETPS(0.059)S(0.941)PR;ELILGSETPS(0.051)S(0.949)PR;ELILGSETPS(0.051)S(0.949)PR 222.75 7.03E-09 42374400 21102.3 20384.5 19105.4 17099.2 20906.5 17794.5 19701.8 17693.1 16498.7 15556.7 TRUE FALSE 19307.43857 19057.46534 17808.57868 18416.18335 20073.74983 18802.00921 18387.52887 17538.41109 18213.79891 17483.98144 1.104293014 1.089995743 1.018565407 1.053317484 1.148122348 1.075384876 1.051678585 1.003113115 1.041742063 1 14.09374613 -7.510002578 3.121856189 1.017005087 1.080583701 0.446367036 0.033146451 0.270823848 5.409800469 0.017912777 0.010288635 3.09E-08 7.510002578 0.063578614 ELILGSETPSS(ph)PR ddPTM_A459_MK2206_30min_R2 2 ELILGSETPSSPR 13 0 R4GNJ5;A0A590TQL1;Q96AP0-2;Q96AP0 R4GNJ5 ACD Adrenocortical dysplasia protein homolog 1 ELILGSETPS(0.06)S(0.94)PR;ELILGSET(0.003)PS(0.282)S(0.715)PR 175.29 0.0001012 21030000 71581 81754 81756 96193 83381 93402 99223 65771 76468 77293 TRUE FALSE 77061.2964 77694.21524 84481.70424 88333.72419 80107.04298 96956.47856 86194.90091 74367.49553 83119.04842 74770.93574 1.030631697 1.039096468 1.129873572 1.181391183 1.071366062 1.296713457 1.152786174 0.994604318 1.111649167 1 16.19018997 -7.752080289 24.98603148 1.039845052 1.131692952 0.228845483 0.078337048 308.0289634 822352.5448 0.039549425 0.022438396 1.77E-08 7.752080289 0.091847899 ELIPQES(ph)PR ddPTM_A459_MK2206_30min_R1 1 ELIPQESPR 9 0 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 ELIPQES(1)PR 103.21 0.01544 14829000 3005.8 2865.2 2979.7 2246.7 2972.3 3051 3623.7 2349.4 2865.5 4108.4 TRUE FALSE 2750.140926 2678.674959 2777.446266 2419.741223 2853.906997 3223.744983 3381.969585 2328.859443 3163.378979 4617.379609 0.595606417 0.580128815 0.601520018 0.524050745 0.618079352 0.698176294 0.732443479 0.5043682 0.685102644 1 12.17285863 -14.52287874 0.257343875 3.450409068 0.582721121 0.759795908 0.065932667 96.24287142 0.946615118 124.4776278 0.093613452 3.00E-15 14.52287874 -2.867687946 ELIS(ph)NASDALDK ddPTM_A459_MK2206_30min_R1 1 ELISNASDALDK 12 0 P08238;P14625;Q96GW1;A0A1W2PRR1;F8W026 P08238;P14625 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin 1 ELIS(0.996)NAS(0.004)DALDK 157.68 0.00044697 5727100 1085.3 1125.5 968.96 866.49 904.74 778.34 991.92 754.98 971.1 1067.9 TRUE FALSE 992.9895359 1052.229745 903.1896949 933.2272099 868.70229 822.4089382 925.7508267 748.3792895 1072.04932 1200.199514 0.827353723 0.876712357 0.752532962 0.777560063 0.723798235 0.685226855 0.771330779 0.623545736 0.893225924 1 10.22905854 -8.511973677 9.775257043 0.999998259 0.756761838 0.594780273 0.06632124 0.161373855 134.5978697 0.067388172 0.017406068 3.08E-09 8.511973677 -0.243236421 ELIS(ph)NASDALDK ddPTM_A459_MK2206_30min_R2 1 ELISNASDALDK 12 0 P08238;P14625;Q96GW1;A0A1W2PRR1;F8W026 P08238;P14625 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin 1 ELIS(0.988)NAS(0.012)DALDK 97.631 0.016025 2206800 18200 13313 14891 16504 13655 14205 18351 8875.6 12456 14099 TRUE FALSE 19593.40599 12651.89578 15387.45851 15155.57041 13118.83609 14745.58123 15941.49166 10035.67139 13539.40036 13638.95078 1.436577219 0.927629697 1.128199577 1.111197675 0.961865491 1.081137505 1.168820968 0.735809635 0.992701021 1 13.73544504 -4.754038096 24.99988886 1.015909856 1.43657796 0.537923924 0.11802006 216.7321233 732011.472 0.030047548 0.304540104 1.76E-05 4.754038096 0.420668103 ELISNASDALDK ddPTM_A459_MK2206_30min_R1 1 ELISNASDALDK 12 0 P08238;P14625;Q96GW1;A0A1W2PRR1;F8W026 P08238;P14625 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin 0 132.03 0.026895 8551000 2306.5 2692.1 2656.6 1922.3 2368.7 2328.3 2493.5 2219.4 2209 2328.1 FALSE TRUE 2110.320063 2516.843801 2476.277394 2070.355879 2274.349663 2460.126334 2327.163165 2199.99602 2438.633455 2616.522604 0.806536148 0.961904092 0.946400153 0.791262371 0.869226071 0.940227434 0.889410686 0.840809101 0.932013143 1 11.35343501 -8.543591386 7.539971417 0.999997538 0.884588412 0.316428868 0.054655925 0.318334178 107.6355891 0.053193264 0.013754556 2.86E-09 8.543591386 -0.115409125 ELISNASDALDK ddPTM_A459_MK2206_30min_R2 1 ELISNASDALDK 12 0 P08238;P14625;Q96GW1;A0A1W2PRR1;F8W026 P08238;P14625 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin 0 180.24 0.00144 2269400 20690 20892 16792 23689 20509 15724 24594 19876 17943 20585 FALSE TRUE 22274.04231 19854.53366 17351.8369 21753.53292 19703.71361 16322.38784 21364.77826 22473.86144 19503.64971 19913.31314 1.118550296 0.997048232 0.871368656 1.092411533 0.989474402 0.819672132 1.072889183 1.128584746 0.979427661 1 14.28144565 ELISNSS(ph)DALDK ddPTM_A459_MK2206_30min_R1 1 ELISNSSDALDK 12 0 P07900;P07900-2;G3V2J8;Q14568 P07900 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 1 ELIS(0.003)NS(0.213)S(0.784)DALDK 136.14 0.0031011 0 902.21 833.51 1100.6 785.92 854.64 754.52 1547.8 891.04 910 744.17 TRUE FALSE 825.4723018 779.2483475 1025.894338 846.4516946 820.5978791 797.2402704 1444.549086 883.2497312 1004.597756 836.3633978 0.986978034 0.931710246 1.226613146 1.012062097 0.981149918 0.953222334 1.727178748 1.056059762 1.201149834 1 9.707986116 ELISNSSDALDK ddPTM_A459_MK2206_30min_R1 1 ELISNSSDALDK 12 0 P07900;P07900-2;G3V2J8;Q14568 P07900 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 0 214.67 1.95E-05 14694000 1964.9 2273.3 2073.6 1673.6 1671.4 1668.9 1571.2 1869.7 1919.8 1892.7 FALSE TRUE 1797.774937 2125.307757 1932.849809 1802.500962 1604.824599 1763.391676 1466.388115 1853.35341 2119.37008 2127.181965 0.845143935 0.999118924 0.908643379 0.847365666 0.754436915 0.828980174 0.689357158 0.871271683 0.99632759 1 11.05472774 -8.221941505 4.549510309 1.000815204 0.840846599 0.392304887 0.077821973 0.224380015 10.71430043 0.067978831 0.022339051 6.00E-09 8.221941505 -0.159968605 ELISNSSDALDKIR ddPTM_A459_MK2206_30min_R1 1 ELISNSSDALDKIR 14 1 P07900;P07900-2;G3V2J8 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 132.51 0.0022606 9280900 2079.5 2446.9 2289.2 2380 3345.7 2116.1 1836 2653 1368 1387.4 FALSE TRUE 1902.627605 2287.606365 2133.815482 2563.308012 3212.433684 2235.911753 1713.52379 2629.805101 1510.208495 1559.281586 1.220195006 1.467089963 1.368460643 1.643903215 2.060201129 1.433937124 1.098918762 1.686549193 0.968528397 1 10.60666577 -8.273736936 24.23904426 0.984263971 1.500342529 0.400038757 0.251346663 610.0550346 1202427.89 0.248530922 0.066227147 5.32E-09 8.273736936 0.516078558 ELKAEDEDIVLT(ph)PDGTR ddPTM_A459_MK2206_30min_R1 2 ELKAEDEDIVLTPDGTR 17 1 F5GZI3;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-9 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 ELKAEDEDIVLT(0.984)PDGT(0.016)R;ELKAEDEDIVLT(0.99)PDGT(0.01)R 105.68 0.0036398 8105700 4963.7 4916 5256.3 5039.8 4613.3 3751.3 4922.1 4386.7 4906.3 3382.9 TRUE FALSE 4541.51125 4595.967506 4899.517001 5427.966269 4429.542492 3963.695364 4593.75569 4348.347544 5416.327442 3801.999192 1.194506106 1.208829165 1.288668607 1.427661079 1.165056137 1.04252925 1.208247414 1.143700281 1.424599841 1 11.89254251 ELKTDS(ph)SPNQAR ddPTM_A459_MK2206_30min_R1 1 ELKTDSSPNQAR 12 1 A6NLN1;P26599;P26599-2;P26599-3;K7ES59;A0A087WU68 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 1 ELKT(0.011)DS(0.495)S(0.495)PNQAR 168.89 0.0017573 19375000 3048.7 3275.8 3134.6 3623.6 3715.5 2646.2 2407.3 3736.3 1463.4 853.5 TRUE FALSE 2789.392056 3062.544825 2921.832085 3902.6903 3567.503767 2796.025557 2246.713409 3703.633923 1615.525667 959.2380236 2.907924818 3.192684974 3.045992771 4.068531693 3.719101703 2.914840205 2.34218552 3.86101659 1.68417601 1 9.905745037 -8.429584548 4.348341657 1.017198892 3.243496421 0.716088094 0.490081081 0.111360415 3.424626594 0.492164832 0.128809355 3.72E-09 8.429584548 2.226297529 ELKTDSS(ph)PNQAR ddPTM_A459_MK2206_30min_R1 1 ELKTDSSPNQAR 12 1 A6NLN1;P26599;P26599-2;P26599-3;K7ES59;A0A087WU68 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 1 ELKT(0.001)DS(0.086)S(0.913)PNQAR 179.83 0.0004933 24648000 3305 3943.8 4470.6 4361 4480.2 2925.4 3089.2 4835.4 1646.9 958.85 TRUE FALSE 3023.892395 3687.057903 4167.148128 4696.884976 4301.744147 3091.03362 2883.125105 4793.124608 1818.101148 1077.639577 2.806033167 3.42142028 3.866921944 4.358493393 3.991820864 2.868337138 2.675407591 4.447799348 1.687114307 1 10.07365903 -8.42426649 4.887203726 1.020702823 3.543995525 0.690308251 0.599685547 0.118479831 4.168897918 0.605731987 0.157849566 3.76E-09 8.42426649 2.523292702 ELLAKPIGPDDAIDALSSDFTCGS(ph)PTAAGK ddPTM_A459_MK2206_30min_R1 1 ELLAKPIGPDDAIDALSSDFTCGSPTAAGK 30 1 P20810-5;F8W7E0;E9PCH5;P20810-2;P20810-3 P20810-5 CAST Calpastatin 1 ELLAKPIGPDDAIDALS(0.001)S(0.001)DFT(0.035)CGS(0.957)PT(0.005)AAGK 127.53 3.56E-18 9127400 4698.2 4739.9 5069.9 4297.1 4563.3 4239.5 4583 4667 4271.6 4361.8 TRUE FALSE 4298.593419 4431.331648 4725.769314 4628.063387 4381.534098 4479.536826 4277.276432 4626.196911 4715.648106 4902.172714 0.876875147 0.903952575 0.964015262 0.944084115 0.893794314 0.913786006 0.87252667 0.94370337 0.961950625 1 12.2592056 -8.339317726 2.006480554 0.996672059 0.912792016 0.525719433 0.027355092 0.268911181 2.106127171 0.027556507 0.007898736 4.58E-09 8.339317726 -0.083880043 ELLAKPIGPDDAIDALSSDFTCGS(ph)PTAAGKK ddPTM_A459_MK2206_30min_R2 1 ELLAKPIGPDDAIDALSSDFTCGSPTAAGKK 31 2 P20810-5;F8W7E0;E9PCH5;P20810-2;P20810-3 P20810-5 CAST Calpastatin 1 ELLAKPIGPDDAIDALS(0.021)S(0.021)DFT(0.074)CGS(0.811)PT(0.074)AAGKK 59.046 0.00087124 4117100 13270 24271 24781 22230 27856 17436 18817 16225 25795 21552 TRUE FALSE 14285.9614 23065.73743 25607.18617 20413.73789 26762.23347 18099.5392 16346.3053 18345.66321 28038.60247 20848.76001 0.685218756 1.106336177 1.228235452 0.979134389 1.283636699 0.868135045 0.784042087 0.879940256 1.344857079 1 14.34767396 ELLDT(ph)SFEDLSKPK ddPTM_A459_MK2206_30min_R1 1 ELLDTSFEDLSKPK 14 1 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 1 ELLDT(0.828)S(0.144)FEDLS(0.028)KPK 83.751 0.03757 48769000 5377 6297.9 5824.9 5205.3 3547.2 3868.9 4342.6 4564.7 5809.9 5692.2 TRUE FALSE 4919.657914 5887.905565 5429.522017 5606.213108 3405.907513 4087.953775 4052.913078 4524.791309 6413.859896 6397.39271 0.769009835 0.920360189 0.84870857 0.876327804 0.532389939 0.6390031 0.63352576 0.707286783 1.002574046 1 12.64326833 -10.82899715 11.15481275 1.000000004 0.763092948 0.198421598 0.138128749 1.59E-08 1.06E-09 0.143953313 0.034913806 1.48E-11 10.82899715 -0.236907056 ELLDTS(ph)FEDLSKPK ddPTM_A459_MK2206_30min_R1 1 ELLDTSFEDLSKPK 14 1 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 1 ELLDT(0.055)S(0.945)FEDLSKPK 187.63 0.00054572 9495700 5826.5 6671 6609.7 5380.4 4236.8 4175.9 5317.7 4662.5 6903.3 5683.1 TRUE FALSE 5330.925579 6236.716687 6161.05198 5794.79934 4068.039284 4412.335849 4962.965936 4621.736254 7620.922739 6387.165333 0.834630904 0.976445162 0.964598794 0.907256825 0.636908405 0.690812844 0.77702168 0.723597404 1.193161965 1 12.64096008 -10.80261982 9.242517889 1.000000034 0.846763031 0.068543402 0.155850789 1.13E-07 8.71E-09 0.156557188 0.037970687 1.58E-11 10.80261982 -0.153237002 ELLDTS(ph)FEDLSKPK ddPTM_A459_MK2206_30min_R2 1 ELLDTSFEDLSKPK 14 1 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 1 ELLDT(0.357)S(0.639)FEDLS(0.005)KPK 66.568 0.037823 10225000 63256 52754 53229 53558 43151 35402 71453 44086 34819 57712 TRUE FALSE 68098.928 50134.31307 55003.62829 49182.14008 41456.67492 36749.24792 62071.13527 49848.19157 37847.49368 55828.86217 1.219779973 0.897999908 0.985218508 0.880944697 0.742567076 0.658248198 1.11181086 0.892874933 0.677919847 1 15.76872353 -1.798074739 1.0077183 0.853328888 200 0.36969208 0.136798085 1026.209127 2.559984114 0.04452208 470331.6428 0.015919347 1.798074739 199.1466711 ELLETLGMMDMLFATMR ddPTM_A459_MK2206_30min_R1 1 ELLETLGMMDMLFATMR 17 0 H0Y8P4;Q8TED0-3;Q8TED0;Q8TED0-2 H0Y8P4 UTP15 U3 small nucleolar RNA-associated protein 15 homolog 0 96.756 0.0062788 5126100 1549.7 1630.3 1858.5 1623.5 1942.4 1519.1 1821.6 1708.1 1341.9 1622.7 FALSE TRUE 1417.889877 1524.167174 1732.350198 1748.542251 1865.030095 1605.110129 1700.084388 1693.166262 1481.395307 1823.732327 0.777466 0.835740614 0.949892795 0.958771321 1.022644643 0.880123747 0.93220061 0.928407221 0.812287684 1 10.83267828 -5.087230915 3.222957348 0.934775128 0.783847766 0.473755712 0.055773014 0.221261552 4.239954296 0.014778564 0.055901623 8.18E-06 5.087230915 -0.150927362 ELLHSVHPES(ph)PNLK ddPTM_A459_MK2206_30min_R1 1 ELLHSVHPESPNLK 14 0 Q9Y217 Q9Y217 MTMR6 Myotubularin-related protein 6 1 ELLHSVHPES(1)PNLK 105.53 0.0038449 9558300 5810.7 4245 4976.9 4357.1 6036.3 5185.1 5534 5839.2 3713 3251.5 TRUE FALSE 5316.469452 3968.649728 4639.081894 4692.684597 5795.861389 5478.675881 5164.836957 5788.14849 4098.979637 3654.320368 1.454844928 1.086015819 1.269478707 1.284147016 1.586029906 1.499232506 1.413350894 1.583919281 1.121680429 1 11.8353874 -2.978851178 15.24435695 1.350507572 44.53194152 0 0.200760847 0 0 0.0455104 0 0.001049902 2.978851178 43.18143395 ELLHSVHPES(ph)PNLK ddPTM_A459_MK2206_30min_R2 2 ELLHSVHPESPNLK 14 0 Q9Y217 Q9Y217 MTMR6 Myotubularin-related protein 6 1 ELLHS(0.002)VHPES(0.998)PNLK;ELLHSVHPES(1)PNLK 99.915 0.0061903 25117000 73979 99247 97678 119042 128446 118461 120181 87032 101443 107448 TRUE FALSE 79642.88912 94318.5383 100934.5358 109315.8878 123402.5647 122969.1164 104401.0903 98407.38123 110266.3288 103941.9806 0.766224471 0.90741525 0.97106612 1.051701028 1.18722545 1.183055352 1.004416981 0.946752993 1.060844985 1 16.66541893 -5.060768871 1.399926824 1.066053536 0.731883296 0.620199974 0.073239585 0.568169519 1.446560526 0.024873394 0.232259176 8.69E-06 5.060768871 -0.33417024 ELLS(ph)PGAPLTK ddPTM_A459_MK2206_30min_R2 1 ELLSPGAPLTK 11 0 Q8IXS8 Q8IXS8 FAM126B Protein FAM126B 1 ELLS(1)PGAPLTK 110.08 0.009029 1306200 26269 24918 23688 24449 21745 21285 23358 17780 16787 23050 TRUE FALSE 28280.17484 23680.60835 24477.7461 22451.43849 20891.18204 22095.01559 20291.06654 20103.90705 18247.10292 22297.88039 1.268289826 1.062011633 1.097761118 1.006886668 0.93691336 0.990902059 0.909999793 0.901606193 0.818333519 1 14.44461896 -2.349687342 0.388965395 0.898288621 3.623288289 0.785375285 0.054868591 15.73051986 0.39431803 0.040379033 29.45531769 0.004470053 2.349687342 2.724999668 ELLS(ph)PGVK ddPTM_A459_MK2206_30min_R1 2 ELLSPGVK 8 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 ELLS(1)PGVK;ELLS(1)PGVK 104.05 0.014921 11090600 7274.2 7743.9 9038.6 7832.7 6884.8 6846.4 7658.2 6724.6 8019.1 5881.7 TRUE FALSE 6655.491092 7239.770702 8425.085015 8435.975911 6610.563837 7234.037251 7147.335451 6665.807531 8852.714142 6610.369401 1.006825896 1.095214241 1.274525598 1.276173146 1.000029414 1.094346899 1.081230869 1.00838654 1.339216253 1 12.69051518 -6.271549199 24.99072112 1.087679718 1.166282609 0.090244338 0.118018653 1835.854559 4538086.313 0.03717231 0.042662978 5.35E-07 6.271549199 0.078602891 ELLS(ph)PGVK ddPTM_A459_MK2206_30min_R2 2 ELLSPGVK 8 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 ELLS(1)PGVK;ELLS(1)PGVK 92.538 0.025323 7815200 68588 66893 63844 66675 69856 67092 83458 55342 58433 81451 TRUE FALSE 73839.15002 63571.19089 65972.5271 61227.43922 67113.10244 69645.23307 72499.86435 62575.38942 63515.39672 78793.26054 0.9371252 0.806810005 0.837286421 0.777064419 0.851761965 0.883898351 0.920127735 0.794171849 0.806101896 1 16.26578462 -6.523775439 23.48217903 0.87015887 0.834236315 0.067857338 0.066361101 46.29443122 1212219.204 0.021623202 0.021839578 2.99E-07 6.523775439 -0.035922555 ELLS(ph)PLSEPDDRYPLIVK ddPTM_A459_MK2206_30min_R2 3 ELLSPLSEPDDRYPLIVK 18 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 ELLS(0.999)PLS(0.001)EPDDRYPLIVK;ELLS(0.752)PLS(0.248)EPDDRYPLIVK;ELLS(0.392)PLS(0.351)EPDDRY(0.257)PLIVK 83.063 0.00499 12457800 27831.5 34613.7 32340.1 36738.2 32451.9 37740 35165.2 28476.9 30193.8 33750.5 TRUE FALSE 29962.30104 32894.83399 33418.30279 33736.57154 31177.67535 39176.22215 30547.967 32198.92861 32820.00215 32649.22395 0.917703315 1.007522692 1.023555808 1.033303934 0.954928527 1.199912813 0.935641443 0.986208084 1.005230697 1 14.99476108 -4.760419681 3.956573279 1.018680774 0.906096094 0.161862836 0.067548541 0.476115863 13.70613284 0.016614635 0.159744704 1.74E-05 4.760419681 -0.112584679 ELLSPLS(ph)EPDDRYPLIVK ddPTM_A459_MK2206_30min_R1 2 ELLSPLSEPDDRYPLIVK 18 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 ELLS(0.008)PLS(0.991)EPDDRYPLIVK;ELLS(0.008)PLS(0.991)EPDDRY(0.001)PLIVK 101.17 0.0014346 142507000 7070.5 7984.5 7921.3 6703.3 8464 7464.5 8447.7 7332.4 7108.9 6109.6 TRUE FALSE 6469.116846 7464.707599 7383.624226 7219.589327 8126.860957 7887.133539 7884.169347 7268.2936 7847.895594 6866.503373 0.942126799 1.087119192 1.075310653 1.051421507 1.183551586 1.148638996 1.148207307 1.058514531 1.142924596 1 12.74535991 -3.812646299 1.074044994 1.111973592 2.07E-09 0.4296274 0.05375575 10.77483011 2.107644899 0.016358787 22.28038967 0.000153941 3.812646299 -1.11197359 ELLTTMGDRFTDEEVDELYR ddPTM_A459_MK2206_30min_R1 3 ELLTTMGDRFTDEEVDELYR 20 1 J3QRS3;P19105;O14950 J3QRS3 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B 0 ;; 156.06 4.86E-06 12512500 2213.99 2076.68 2137.79 2733.71 3097.1 2040.07 1783.48 2178.19 1214.2 935.91 FALSE TRUE 2025.678524 1941.487755 1992.682771 2944.260818 2973.735949 2155.577 1664.507303 2159.146314 1340.420435 1051.857597 1.925810614 1.845770531 1.894441584 2.799105913 2.827127891 2.04930497 1.582445484 2.052698313 1.274336412 1 10.03872369 -8.194350689 0.980076738 0.999987981 2.219602807 0.544646812 0.37041453 0.450089308 0.870734258 0.390680022 0.138380084 6.39E-09 8.194350689 1.219614826 ELLVSQHTVQLVGGLS(ph)PLSSPSDTK ddPTM_A459_MK2206_30min_R1 2 ELLVSQHTVQLVGGLSPLSSPSDTK 25 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 ELLVSQHTVQLVGGLS(0.996)PLS(0.003)SPSDTK;ELLVSQHTVQLVGGLS(0.99)PLS(0.009)SPSDTK 204.99 8.04E-32 155828000 11332.5 5325.4 7415.6 4404.3 11912.4 12931.3 13603.9 8924.7 6820.1 7006.7 TRUE FALSE 10368.61137 4978.715492 6912.249733 4743.519949 11437.90388 13663.45903 12696.40865 8846.672289 7529.073801 7874.742894 1.31669205 0.632238482 0.877774656 0.602371406 1.45247966 1.735099065 1.612295007 1.123423635 0.956104079 1 12.94301711 -6.271429615 24.95278651 1.355451118 0.842660205 0.354603326 0.29784753 714.1104273 1783643.168 0.096373312 0.110557528 5.35E-07 6.271429615 -0.512790913 ELLVSQHTVQLVGGLS(ph)PLSSPSDTK ddPTM_A459_MK2206_30min_R2 3 ELLVSQHTVQLVGGLSPLSSPSDTK 25 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 ELLVSQHTVQLVGGLS(0.998)PLS(0.001)SPSDTK;ELLVSQHTVQLVGGLS(0.994)PLS(0.004)S(0.001)PSDTK;ELLVSQHTVQLVGGLS(0.995)PLS(0.004)SPSDTK 158.11 4.29E-13 59490100 63615.2 110273 99609 195220 162133 156360 180723 128962 139065 114663.2 TRUE FALSE 68485.62862 104797.0032 102929.9143 179269.9015 155766.8438 162310.3894 156993.853 145817.7762 151160.6223 110921.7492 0.617422905 0.944783182 0.927950696 1.616183506 1.404294874 1.463287323 1.415356809 1.314600403 1.362768109 1 16.75918275 -5.634349828 5.613167279 1.387364809 0.818245862 0.691840476 0.165456744 0.107200894 4.842626216 0.04346901 0.076349163 2.32E-06 5.634349828 -0.569118947 ELNFVTDSVEQELPS(ph)SPKQPICFDR ddPTM_A459_MK2206_30min_R1 1 ELNFVTDSVEQELPSSPKQPICFDR 25 1 B4DP81;Q8TAP6-2;Q8TAP6 B4DP81 CEP76 Centrosomal protein of 76 kDa 1 ELNFVTDSVEQELPS(0.5)S(0.5)PKQPICFDR 104.67 1.90E-07 17004000 2068.5 2393.9 2226 2170.3 1889.1 1771.1 1875 2040.9 1814.4 1712 TRUE FALSE 1892.563213 2238.056675 2074.905322 2337.456882 1813.853147 1871.378151 1749.922171 2023.056626 2003.013373 1924.095485 0.983611899 1.163173394 1.078379601 1.214834139 0.942704331 0.972601498 0.909477822 1.051432552 1.041015578 1 10.90996468 -6.279844569 24.99246126 0.984260358 1.111539301 0.442826022 0.067997909 749.0530775 1017138.311 0.02096138 0.023811173 5.25E-07 6.279844569 0.127278943 ELNFVTDSVEQELPS(ph)SPKQPICFDR ddPTM_A459_MK2206_30min_R2 1 ELNFVTDSVEQELPSSPKQPICFDR 25 1 B4DP81;Q8TAP6-2;Q8TAP6 B4DP81 CEP76 Centrosomal protein of 76 kDa 1 ELNFVTDSVEQELPS(0.5)S(0.5)PKQPICFDR 109.68 1.16E-07 5011000 27151 32056 26017 27049 29680 25786 29827 22947 25331 29738 TRUE FALSE 29229.70144 30464.14565 26884.39379 24839.01017 28514.61407 26767.3043 25910.67907 25946.25169 27534.24459 28767.6515 1.016061441 1.058972286 0.934535577 0.863435452 0.991204099 0.930465398 0.90068802 0.901924569 0.957125214 1 14.81215983 -5.270902947 22.97973428 0.929494718 1.037516862 0.502452271 0.04055031 144.0292127 349739.0383 0.010278147 0.021935414 5.36E-06 5.270902947 0.108022143 ELNFVTDSVEQELPSS(ph)PKQPICFDR ddPTM_A459_MK2206_30min_R2 1 ELNFVTDSVEQELPSSPKQPICFDR 25 1 B4DP81;Q8TAP6-2;Q8TAP6 B4DP81 CEP76 Centrosomal protein of 76 kDa 1 ELNFVTDSVEQELPS(0.3)S(0.7)PKQPICFDR 137.42 1.96E-08 7738600 19489 26353 19534 23054 27989 19047 27574 19971 18690 19807 TRUE FALSE 20981.09282 25044.34834 20185.25381 21170.41445 26890.01123 19771.84693 23953.50068 22581.27827 20315.62242 19160.69921 1.095006638 1.307068602 1.053471671 1.104887364 1.403394048 1.031895899 1.250137086 1.178520576 1.060275629 1 14.22586259 -8.39256738 3.106340772 1.002773104 1.181151109 0.230738852 0.110446246 0.341601892 6.068363142 0.100475142 0.027043427 4.05E-09 8.39256738 0.178378004 ELNS(ph)NHDGADETSEK ddPTM_A459_MK2206_30min_R2 1 ELNSNHDGADETSEK 15 0 Q01105-2 Q01105-2 SET Protein SET 1 ELNS(1)NHDGADETSEK 75.017 0.026113 4410100 32693 26661 27210 27727 24257 26506 33807 24825 28492 30100 TRUE FALSE 35196.00122 25337.05351 28117.16782 25461.61541 23304.5483 27514.7044 29368.10029 28069.71274 30970.18266 29117.83947 1.20874357 0.870155684 0.965633726 0.874433539 0.800352936 0.9449432 1.008594759 0.964003966 1.063615406 1 14.82961569 -10.22238288 9.322577808 0.999997387 0.956751417 0.000878487 0.107988035 0 0 0.104252567 0.025284962 5.99E-11 10.22238288 -0.043245971 ELNS(ph)NHDGADETSEKEQQEAIEHIDEVQNEIDR ddPTM_A459_MK2206_30min_R2 1 ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDR 33 1 Q01105-2 Q01105-2 SET Protein SET 1 ELNS(0.595)NHDGADET(0.203)S(0.203)EKEQQEAIEHIDEVQNEIDR 47.383 0.0065608 6340100 9664.3 14184 12176 22321 16354 13800 12406 12974 16226 9373 TRUE FALSE 10404.20624 13479.64319 12581.94176 20497.3029 15711.85979 14325.16867 10777.0773 14669.74635 17637.30815 9067.159778 1.14746034 1.486644497 1.387638695 2.260608989 1.732831468 1.579895912 1.188583588 1.617898736 1.945185547 1 13.14643499 -10.15182238 9.045042196 0.999978552 1.596892506 0.239991765 0.317125273 0 0 0.320865554 0.077821328 7.05E-11 10.15182238 0.596913954 ELNSNHDGADET(ph)SEKEQQEAIEHIDEVQNEIDR ddPTM_A459_MK2206_30min_R1 5 ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDR 33 1 Q01105-2 Q01105-2 SET Protein SET 1 ELNSNHDGADET(0.5)S(0.5)EKEQQEAIEHIDEVQNEIDR;ELNSNHDGADET(0.5)S(0.5)EKEQQEAIEHIDEVQNEIDR;ELNSNHDGADET(0.5)S(0.5)EKEQQEAIEHIDEVQNEIDR;ELNSNHDGADET(0.84)S(0.16)EKEQQEAIEHIDEVQNEIDR;ELNS(0.02)NHDGADET(0.49)S(0.49)EKEQQEAIEHIDEVQNEIDR 105.21 3.63E-14 42515700 3688.83 3471.77 3812.37 2322.52 3291.05 3516.53 3738.86 2922.47 3399.6 3807.91 TRUE FALSE 3375.075638 3245.757142 3553.596946 2501.400893 3159.96051 3715.63289 3489.447471 2896.919153 3753.000586 4279.662639 0.788631236 0.758414253 0.83034511 0.584485532 0.73836673 0.86820696 0.815355734 0.676903625 0.876938418 1 12.06328136 -6.741312662 23.66160625 0.825279582 0.737442902 0.222231982 0.096041765 245.3573188 288448.166 0.031698169 0.031649289 1.81E-07 6.741312662 -0.08783668 ELNSNHDGADET(ph)SEKEQQEAIEHIDEVQNEIDR ddPTM_A459_MK2206_30min_R2 2 ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDR 33 1 Q01105-2 Q01105-2 SET Protein SET 1 ELNS(0.006)NHDGADET(0.497)S(0.497)EKEQQEAIEHIDEVQNEIDR;ELNS(0.01)NHDGADET(0.495)S(0.495)EKEQQEAIEHIDEVQNEIDR 51.566 0.0022219 38532000 9177.8 16453.3 13025.4 13556.3 19024.5 12820.1 19785.9 9199.3 10137.1 20271.6 TRUE FALSE 9880.459425 15636.25305 13459.66033 12448.70693 18277.50254 13307.97789 17187.98756 10401.6801 11018.80663 19610.13935 0.503844427 0.79735553 0.686362299 0.634809713 0.932043481 0.6786274 0.876484723 0.530423569 0.561893337 1 14.25931217 -4.751184696 24.81748207 0.732273477 0.50384391 0.186743189 0.148618916 709.7001664 1717426.619 0.03596171 0.485364802 1.77E-05 4.751184696 -0.228429567 ELNSNHDGADETS(ph)EK ddPTM_A459_MK2206_30min_R2 2 ELNSNHDGADETSEK 15 0 Q01105-2 Q01105-2 SET Protein SET 1 ELNSNHDGADET(0.009)S(0.991)EK;ELNSNHDGADET(0.223)S(0.777)EK 122.29 0.0010422 10920100 60940 58541 63843 77371 61748 60477 92231 59580 55495 79726 TRUE FALSE 65605.61325 55633.93907 65971.49376 71049.5418 59323.46326 62778.49461 80120.95891 67367.31057 60321.85479 77124.54715 0.850645037 0.721351906 0.855389058 0.921231235 0.769190426 0.813988502 1.038851596 0.873487276 0.782135611 1 16.23490249 ELNVS(ph)FINEK ddPTM_A459_MK2206_30min_R1 1 ELNVSFINEK 10 0 P49585;C9JEJ2;C9J050;Q9Y5K3-2;Q9Y5K3-4;Q9Y5K3-3;Q9Y5K3 P49585 PCYT1A;PCYT1B Choline-phosphate cytidylyltransferase A;Choline-phosphate cytidylyltransferase B 1 ELNVS(1)FINEK 101.45 0.016342 2503200 1512.2 1086 1301.8 1222.1 1691 830.8 1282.5 1570.1 1385.6 1382.9 TRUE FALSE 1383.579449 1015.301203 1213.437443 1316.226354 1623.643889 877.839178 1196.946765 1556.372781 1529.638078 1554.224092 0.890205895 0.653252776 0.780735191 0.846870384 1.044665243 0.564808629 0.770124959 1.001382483 0.984181165 1 10.60197882 -7.763680723 24.98864714 0.99458643 0.790089276 0.36674583 0.121738161 66.29679817 739103.741 0.064257565 0.033213623 1.72E-08 7.763680723 -0.204497154 ELNVS(ph)FINEK ddPTM_A459_MK2206_30min_R2 2 ELNVSFINEK 10 0 P49585;C9JEJ2;C9J050;Q9Y5K3-2;Q9Y5K3-4;Q9Y5K3-3;Q9Y5K3 P49585 PCYT1A;PCYT1B Choline-phosphate cytidylyltransferase A;Choline-phosphate cytidylyltransferase B 1 ELNVS(1)FINEK;ELNVS(1)FINEK 117.92 0.0058747 4610600 25456 24174 30137 25322 27920 21260.4 29304 21072.2 16533 26750 TRUE FALSE 27404.93093 22973.55431 31141.75254 23253.1116 26823.72051 22069.47942 25456.3496 23826.40889 17971.01046 25877.14969 1.059039781 0.887793076 1.20344601 0.898596324 1.036579408 0.852855886 0.983738546 0.920750901 0.694474108 1 14.6593911 -6.829886974 0.965545342 0.873161994 1.025051274 0.210878779 0.115556672 0.857444419 1.707274272 0.067691167 0.057759214 1.48E-07 6.829886974 0.15188928 ELPDSS(ph)SPVPANNIR ddPTM_A459_MK2206_30min_R1 2 ELPDSSSPVPANNIR 15 0 Q9BWT3-2;Q9BWT3;A0A0C4DH56 Q9BWT3-2 PAPOLG Poly(A) polymerase gamma 1 ELPDS(0.093)S(0.453)S(0.453)PVPANNIR;ELPDS(0.016)S(0.492)S(0.492)PVPANNIR 135.72 0.00040861 22287000 5535.4 5110 5421.4 5025.5 5904.7 5432 6110.9 5517.6 4809.7 4582.4 TRUE FALSE 5064.585162 4777.338071 5053.410473 5412.564881 5669.503296 5739.555146 5703.253011 5469.360205 5309.685527 5150.102307 0.983395059 0.927620033 0.981225259 1.050962594 1.100852557 1.114454588 1.10740577 1.061990593 1.030986417 1 12.33038538 -5.759974628 2.962102682 1.076505617 0.955191424 0.63576203 0.035803585 0.147348377 2.650198309 0.010519372 0.018496044 1.74E-06 5.759974628 -0.121314193 ELPDSS(ph)SPVPANNIR ddPTM_A459_MK2206_30min_R2 1 ELPDSSSPVPANNIR 15 0 Q9BWT3-2;Q9BWT3;A0A0C4DH56 Q9BWT3-2 PAPOLG Poly(A) polymerase gamma 1 ELPDS(0.001)S(0.499)S(0.499)PVPANNIR 87.363 0.018735 8832300 45539 50343 48698 59504 59029 53239 54170 42231 47077 52408 TRUE FALSE 49025.50085 47843.03983 50321.56701 54642.33286 56711.22486 55265.04745 47057.41393 47750.7367 51171.67236 50697.93125 0.967011861 0.943688207 0.992576339 1.077802023 1.118610236 1.090084863 0.928191995 0.941867558 1.009344387 1 15.62963926 -10.6195602 13.30904495 0.999999967 1.00883393 0.001015359 0.063760793 0 0 0.070471688 0.017091895 2.40E-11 10.6195602 0.008833963 ELPESGIQLGT(ph)PR ddPTM_A459_MK2206_30min_R1 2 ELPESGIQLGTPR 13 0 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 ELPESGIQLGT(1)PR;ELPESGIQLGT(1)PR 125.39 0.0049895 30814000 2536.8 2096.88 2000.53 1944.19 2287.29 2078.2 2437.67 1830.6 2005.28 2033.35 TRUE FALSE 2321.031839 1960.372731 1864.739597 2093.931851 2196.182396 2195.865888 2275.057482 1814.595257 2213.736032 2285.256749 1.015654735 0.857834785 0.815986912 0.916278598 0.961022168 0.960883668 0.995536927 0.794044371 0.968703422 1 11.15814055 -5.996683295 24.98773126 0.939469887 0.888210803 0.082573856 0.072190434 260.7209311 1964194.957 0.020574476 0.030350437 1.01E-06 5.996683295 -0.051259084 ELPESGIQLGT(ph)PR ddPTM_A459_MK2206_30min_R2 4 ELPESGIQLGTPR 13 0 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 ELPESGIQLGT(1)PR;ELPES(0.001)GIQLGT(0.999)PR;ELPESGIQLGT(1)PR;ELPES(0.023)GIQLGT(0.977)PR 133.48 0.0030825 21426200 35524 41429.3 33526.2 45478.3 40804.7 41652.4 41827.4 34699.8 33600 37074.9 TRUE FALSE 38243.74475 39371.98121 34643.94677 41762.57741 39202.50245 43237.51127 36335.41214 39235.183 36522.46727 35865.14905 1.06632053 1.097778268 0.965950169 1.164433399 1.093052824 1.20555783 1.013111979 1.09396403 1.018327492 1 15.13029501 -8.304018101 1.481639528 0.998317879 1.091166843 0.19130578 0.064084206 0.664911946 2.882334274 0.060130207 0.018305885 4.97E-09 8.304018101 0.092848964 ELPPAAAIGATSLVAAPHSS(ph)SSSPSKDSSR ddPTM_A459_MK2206_30min_R2 1 ELPPAAAIGATSLVAAPHSSSSSPSKDSSR 30 1 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 ELPPAAAIGATSLVAAPHS(0.091)S(0.217)S(0.217)S(0.217)S(0.217)PS(0.023)KDS(0.009)S(0.009)R 65.278 0.00022283 5831700 4076.9 12246 7520.9 18503 19815 31229 16923 12499 19656 9206.5 TRUE FALSE 4389.030599 11637.88145 7771.643052 16991.24571 19036.96354 32417.44148 14700.98977 14132.66222 21365.64335 8906.092659 0.492812142 1.306732581 0.872620952 1.907822696 2.137521387 3.639917382 1.650666609 1.586853265 2.39899181 1 13.12057691 -5.832674558 3.762760749 2.147201362 0.920579987 0.380395759 0.671998582 0.234808893 6.554290245 0.196363753 0.313518172 1.47E-06 5.832674558 -1.226621375 ELPPAAAIGATSLVAAPHSSS(ph)SSPSKDSSR ddPTM_A459_MK2206_30min_R1 2 ELPPAAAIGATSLVAAPHSSSSSPSKDSSR 30 1 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 ELPPAAAIGATSLVAAPHS(0.031)S(0.09)S(0.262)S(0.262)S(0.262)PS(0.059)KDS(0.02)S(0.014)R;ELPPAAAIGATSLVAAPHS(0.023)S(0.225)S(0.239)S(0.239)S(0.239)PS(0.022)KDS(0.009)S(0.006)R 131.4 3.19E-18 43241000 5291.3 2711.09 3573.8 2905.9 7596.4 7840.5 6887.8 4845.9 2818.7 2306.28 TRUE FALSE 4841.247149 2534.597548 3331.220413 3129.712922 7293.819302 8284.422334 6428.32743 4803.532807 3111.713952 2591.999378 1.867765552 0.977854227 1.285193369 1.207451263 2.813974172 3.196151359 2.48006519 1.853215262 1.200507214 1 11.33984966 -3.449752334 18.11325659 1.84612415 1.664111584 0 0.759663963 0 0 0.192924693 0 0.000355016 3.449752334 -0.182012566 ELPPAAAIGATSLVAAPHSSSSSPS(ph)K ddPTM_A459_MK2206_30min_R2 2 ELPPAAAIGATSLVAAPHSSSSSPSK 26 0 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 ELPPAAAIGATSLVAAPHS(0.015)S(0.176)S(0.176)S(0.176)S(0.176)PS(0.282)K;ELPPAAAIGATSLVAAPHS(0.155)S(0.155)S(0.155)S(0.155)S(0.155)PS(0.223)K 120.72 5.11E-09 9389500 26303 41495 28364 66809 56968 74551 56606 41443 48329 32916 TRUE FALSE 28316.7779 39434.41864 29309.6416 61350.49099 54731.15008 77388.09055 49173.5642 46859.7424 52532.56906 31841.95362 0.889291475 1.238442186 0.920472467 1.92671881 1.718837693 2.43038136 1.544301107 1.471635282 1.649791018 1 14.95864123 -5.757150051 24.99909827 1.724589654 1.038305932 0.420466949 0.352461502 100.8146684 587559.0595 0.096395913 0.159708021 1.75E-06 5.757150051 -0.686283722 ELPPLS(ph)PSLSR ddPTM_A459_MK2206_30min_R1 5 ELPPLSPSLSR 11 0 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 ELPPLS(0.717)PS(0.282)LS(0.001)R;ELPPLS(0.676)PS(0.323)LS(0.001)R;ELPPLS(0.681)PS(0.313)LS(0.007)R;ELPPLS(0.928)PS(0.072)LSR;ELPPLS(0.498)PS(0.498)LS(0.003)R 185.3 2.03E-05 119035100 15979 14301.7 13864.4 11068.1 18987.8 16503.8 18364.2 14596.6 13227.2 11573.1 TRUE FALSE 14619.90214 13370.65673 12923.32316 11920.56698 18231.47572 17438.23089 17139.15773 14468.98347 14602.21477 13006.863 1.124014464 1.027969367 0.993577249 0.916482858 1.401681229 1.340694593 1.317701103 1.11241146 1.122654615 1 13.66698543 -6.24973188 24.89556788 1.232811812 1.014834175 0.386119019 0.122642449 736.9606932 1567119.48 0.037914297 0.048539215 5.63E-07 6.24973188 -0.217977638 ELPPLS(ph)PSLSR ddPTM_A459_MK2206_30min_R2 4 ELPPLSPSLSR 11 0 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 ELPPLS(0.875)PS(0.125)LSR;ELPPLS(0.812)PS(0.144)LS(0.044)R;ELPPLS(0.834)PS(0.165)LS(0.002)R;ELPPLS(0.923)PS(0.077)LSR 187.78 1.94E-05 114372000 232709 249527 261855 305253 265768 286360 312360 205461 263614 282882 TRUE FALSE 250525.38 237135.852 270585.115 280312.8534 255332.6129 297257.6305 271346.7568 232315.4582 286542.6692 273651.5835 0.915490335 0.866561227 0.98879426 1.024342157 0.933057319 1.086263148 0.991577514 0.84894615 1.04710766 1 18.06198068 -5.270250114 23.9794287 0.987301824 0.891025782 0.290172772 0.061810687 417.8245586 1137162.692 0.016160757 0.034532862 5.37E-06 5.270250114 -0.096276042 ELPPS(ph)PEK ddPTM_A459_MK2206_30min_R2 2 ELPPSPEK 8 0 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816-3;P27816;P27816-6;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ELPPS(1)PEK;ELPPS(1)PEK 88.596 0.030848 22537400 260250 176843 181526 173276 163425 134025 219470 183126 142208 222760 TRUE FALSE 280174.9401 168061.2338 187577.9862 159118.7965 157008.1134 139125.4153 190653.3254 207061.197 154576.9948 215491.3594 1.300167862 0.779897784 0.870466392 0.738399892 0.728605146 0.645619461 0.88473768 0.960879348 0.717323401 1 17.7172705 -4.759568727 24.99928327 0.806452951 1.300168483 0.645117831 0.108047389 30.53113273 407905.3477 0.026989355 0.169793533 1.74E-05 4.759568727 0.493715532 ELPPS(ph)PEKK ddPTM_A459_MK2206_30min_R1 7 ELPPSPEKK 9 1 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816-3;P27816;P27816-6;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK 130.1 0.0086672 667045000 45478.9 55552.2 50554.6 45372.7 29542.29 30800.9 36764.8 33618.5 50990.9 47687.3 TRUE FALSE 41610.68074 51935.74168 47123.09461 48867.31322 28365.55803 32544.82034 34312.28727 33324.577 56291.58653 53595.16274 0.776388737 0.969037858 0.879241562 0.911785891 0.529255936 0.607234285 0.640212391 0.621783297 1.050310954 1 15.70981518 -6.211825462 24.99342141 0.710780838 0.889831637 0.135269297 0.165903335 598.2807323 301388.4365 0.048306638 0.062363558 6.14E-07 6.211825462 0.179050799 ELPPS(ph)PEKK ddPTM_A459_MK2206_30min_R2 8 ELPPSPEKK 9 1 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816-3;P27816;P27816-6;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK 121.02 0.011482 471090000 1394833 1154241 1171538 1004881 1039799 632823 1444424 1013848 740134 1433785 TRUE FALSE 1501622.487 1096923.07 1210596.492 922779.0078 998971.2667 656905.5227 1254769.394 1146361.415 804509.5175 1387000.713 1.082640025 0.790859774 0.872816056 0.665305359 0.720238467 0.473615851 0.904663842 0.82650384 0.580035403 1 20.4035371 -2.550182474 1.031456556 0.733964356 38.62379638 0.298964491 0.14875532 216.7747859 2.809135623 0.04542103 18877.05723 0.002817199 2.550182474 37.88983203 ELPSLS(ph)PAPDTGLSPSK ddPTM_A459_MK2206_30min_R2 1 ELPSLSPAPDTGLSPSK 17 0 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;A0A0A0MSL0 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 ELPS(0.109)LS(0.891)PAPDTGLSPSK 91.14 0.0085967 2083100 7652.5 7651.8 5411.3 8075.3 6261.1 6010.9 6000 6543.1 5056.7 6959.1 TRUE FALSE 8238.381284 7271.822739 5591.710041 7415.522158 6015.257754 6239.649012 5212.192793 7398.305636 5496.522626 6732.025137 1.223759733 1.080183539 0.830613363 1.101529184 0.893528713 0.926860623 0.774238463 1.098971778 0.816473871 1 12.71682485 -4.989492151 3.752776675 0.932974326 1.211578063 0.438787334 0.105993655 0.192409275 5.868419271 0.025602295 0.111821187 1.02E-05 4.989492151 0.278603737 ELPSLS(ph)PAPDTGLSPSKR ddPTM_A459_MK2206_30min_R1 2 ELPSLSPAPDTGLSPSKR 18 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;A0A0A0MSL0 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 ELPS(0.045)LS(0.955)PAPDTGLSPSKR;ELPS(0.238)LS(0.762)PAPDTGLSPSKR 120.71 0.00048637 19417700 4276.9 4677.7 4751.7 3998.4 4479.1 3463.6 4116.1 4007.1 3465.4 3282.4 TRUE FALSE 3913.127196 4373.18088 4429.167843 4306.357461 4300.687962 3659.706039 3841.522479 3972.066347 3825.640731 3689.048493 1.060741599 1.185449551 1.200626083 1.167335553 1.165798707 0.992046064 1.041331521 1.076718388 1.037026414 1 11.84903304 -6.750647575 24.99916455 1.034963568 1.160737008 0.699093982 0.041379626 123.466112 286008.2847 0.013946613 0.013812377 1.78E-07 6.750647575 0.125773441 ELPVPGS(ph)AEEEPPSGGGR ddPTM_A459_MK2206_30min_R1 2 ELPVPGSAEEEPPSGGGR 18 0 P16383-3;P16383-4;P16383;C9JII4;P16383-2 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 1 ELPVPGS(1)AEEEPPSGGGR;ELPVPGS(1)AEEEPPSGGGR 170.79 7.64E-08 11579500 3841.7 3647.7 3595.5 3568.8 3662.3 3506.7 3462.43 3955.5 3349.86 2689.23 TRUE FALSE 3514.943241 3410.234067 3351.447478 3843.669594 3516.422836 3705.246324 3231.457612 3920.917481 3698.089935 3022.392115 1.162967315 1.128322844 1.108872492 1.27173095 1.163456859 1.225931707 1.069172195 1.297289475 1.223563917 1 11.56147513 -11.8399204 2.241353896 0.060642029 1.182902936 0.393726523 0.068300252 1211732.636 233296.8044 5852751.23 0.01744819 1.45E-12 11.8399204 1.122260907 ELPVPGS(ph)AEEEPPSGGGR ddPTM_A459_MK2206_30min_R2 2 ELPVPGSAEEEPPSGGGR 18 0 P16383-3;P16383-4;P16383;C9JII4;P16383-2 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 1 ELPVPGS(1)AEEEPPSGGGR;ELPVPGS(1)AEEEPPSGGGR 121.03 0.00094041 8810800 19304.4 25259 23078.3 28445 23739.9 30453 25098.1 22611.7 22760.4 29542 TRUE FALSE 20782.35971 24004.67479 23847.719 26120.95251 22807.75224 31611.91025 21802.68932 25567.12683 24740.05845 28578.04696 0.727214135 0.839969044 0.834476864 0.914021611 0.798086457 1.106160624 0.762917401 0.894642201 0.865701512 1 14.8026197 -3.594674241 0.689376026 0.903053107 8.01E-10 0.259907687 0.091949549 19.37404149 1.994582363 0.035743937 19.87430951 0.000254288 3.594674241 -0.903053106 ELPVS(ph)PGHR ddPTM_A459_MK2206_30min_R1 1 ELPVSPGHR 9 0 Q16236-3;Q16236-2;Q16236;C9JBM0 Q16236-3 NFE2L2 Nuclear factor erythroid 2-related factor 2 1 ELPVS(1)PGHR 74.611 0.04201 0 1708.4 1655.8 1401.3 1255.3 2527.1 2540.9 2760.3 1609.2 1549 1993.7 TRUE FALSE 1563.091609 1548.007119 1306.18366 1351.983424 2426.440256 2684.763562 2576.165423 1595.130934 1710.024093 2240.694608 0.697592436 0.690860376 0.582936941 0.603376926 1.082896459 1.198183614 1.149717331 0.711891272 0.763166961 1 11.12973032 -6.25589781 24.97062247 0.988867959 0.642721224 0.562174068 0.147227123 389.948237 1757127.269 0.050309094 0.063113659 5.55E-07 6.25589781 -0.346146735 ELPVS(ph)PGHR ddPTM_A459_MK2206_30min_R2 3 ELPVSPGHR 9 0 Q16236-3;Q16236-2;Q16236;C9JBM0 Q16236-3 NFE2L2 Nuclear factor erythroid 2-related factor 2 1 ELPVS(1)PGHR;ELPVS(1)PGHR;ELPVS(1)PGHR 106.67 0.0086223 8204200 99701 103944 94960 113646 95507 119322 109902 94740 89363 103493 TRUE FALSE 107334.1852 98782.29211 98125.919 104360.7583 91756.9153 123862.8823 95471.73538 107122.8433 97135.63221 100116.0319 1.072097877 0.98667806 0.980121936 1.042398069 0.916505714 1.237193285 0.953610861 1.069986907 0.970230545 1 16.61131349 -4.730616987 22.81868617 1.02093729 1.072098774 0.035095928 0.08421462 5474.719831 4052422.366 0.019868632 2.073872359 1.86E-05 4.730616987 0.051161483 ELQELVQYPVEHPDK ddPTM_A459_MK2206_30min_R2 2 ELQELVQYPVEHPDK 15 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 192.78 4.26E-05 21181800 94167 111718 109113 111446 91272 87453 111212 94598 83187 109176 FALSE TRUE 101376.4979 106170.2466 112750.773 102340.5053 87688.20268 90781.0852 96609.73081 106962.2834 90422.45489 105613.5961 0.95988113 1.005270633 1.067578202 0.969008812 0.830273809 0.859558699 0.914747101 1.012770016 0.856163016 1 16.68843604 -6.005874073 24.72490633 0.909404376 1.011670641 0.354111621 0.060291141 250.0019363 1052308.892 0.017547557 0.025107778 9.87E-07 6.005874073 0.102266265 ELQGDGPPS(ph)SPTNDPTVK ddPTM_A459_MK2206_30min_R1 3 ELQGDGPPSSPTNDPTVK 18 0 A0A5F9ZHX5;Q12873-2;Q12873;Q12873-3 A0A5F9ZHX5;Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 ELQGDGPPS(0.499)S(0.499)PT(0.002)NDPTVK;ELQGDGPPS(0.855)S(0.143)PT(0.001)NDPTVK;ELQGDGPPS(0.749)S(0.244)PT(0.007)NDPTVK 278.27 7.24E-67 43186000 24045.2 22909.4 23734.6 19793.6 21965 20503.9 24491.9 22713.4 24564.2 23778 TRUE FALSE 22000.02947 21417.9939 22123.56148 21318.1065 21090.08754 21664.8131 22858.09004 22514.81914 27117.73649 26723.79815 0.823237376 0.801457703 0.827859923 0.797719934 0.789187503 0.810693636 0.855345857 0.842500718 1.014741106 1 14.70583745 -8.20376999 3.26201422 1.012919862 0.81458207 0.942615278 0.018689576 0.056088867 1.115610597 0.017411629 0.005350164 6.26E-09 8.20376999 -0.198337792 ELQGDGPPS(ph)SPTNDPTVK ddPTM_A459_MK2206_30min_R2 2 ELQGDGPPSSPTNDPTVK 18 0 A0A5F9ZHX5;Q12873-2;Q12873;Q12873-3 A0A5F9ZHX5;Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 ELQGDGPPS(0.73)S(0.261)PT(0.008)NDPTVK;ELQGDGPPS(0.441)S(0.441)PT(0.118)NDPTVK 251.74 4.51E-33 54159000 391351 425854 392518 423017 425115 362463 485660 348906 328234 429509 TRUE FALSE 421313.1335 404706.7096 405604.3542 388455.1579 408422.8491 376256.7835 421892.2586 394509.2122 356783.2 415494.1565 1.014004955 0.974037067 0.976197494 0.934923276 0.98298097 0.905564561 1.015398778 0.949494009 0.858696072 1 18.66446866 -1.522878745 0.586143166 0.947658162 4.701157174 0.168142787 0.043287162 290.2537154 2.35948577 0.019572473 1389.316722 0.03 1.522878745 3.753499011 ELQGDGPPSS(ph)PTNDPTVK ddPTM_A459_MK2206_30min_R1 1 ELQGDGPPSSPTNDPTVK 18 0 A0A5F9ZHX5;Q12873-2;Q12873;Q12873-3 A0A5F9ZHX5;Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 ELQGDGPPS(0.188)S(0.807)PT(0.004)NDPTVK 238.19 6.62E-25 17051000 6657.9 6705.8 7437.4 5491 6141 5533.8 7546.7 6254.4 6938.1 6767.6 TRUE FALSE 6091.610643 6269.251201 6932.57001 5913.917771 5896.390966 5847.118974 7043.273413 6199.71844 7659.340323 7606.021381 0.800893179 0.824248433 0.911458128 0.777531047 0.775226715 0.76874869 0.926012834 0.815106628 1.007010096 1 12.89292628 -8.262897891 24.90507085 1.003505077 0.826030091 0.659993421 0.051271562 77.35735644 1320855.795 0.043001241 0.01343113 5.46E-09 8.262897891 -0.177474986 ELQGDGPPSSPT(ph)NDPTVK ddPTM_A459_MK2206_30min_R2 2 ELQGDGPPSSPTNDPTVK 18 0 A0A5F9ZHX5;Q12873-2;Q12873;Q12873-3 A0A5F9ZHX5;Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 ELQGDGPPS(0.024)S(0.222)PT(0.753)NDPTVK;ELQGDGPPS(0.092)S(0.092)PT(0.816)NDPTVK 241.98 8.24E-25 50529000 326110 342979 327134 352173 330478 286531 359279 271888 283264 326876 TRUE FALSE 351077.2323 325947.1616 338040.4843 323399.3394 317501.7732 297435.138 312105.2357 307424.6951 307901.7907 316210.0629 1.110265844 1.030793134 1.069037719 1.022735761 1.004084975 0.94062515 0.98701867 0.972216672 0.973725466 1 18.27052375 -6.063969274 1.491602696 0.973779208 1.070723284 0.751213245 0.023576053 0.190795618 0.854852261 0.007989044 0.01312926 8.63E-07 6.063969274 0.096944075 ELQQAELPNRS(ph)PGFGIK ddPTM_A459_MK2206_30min_R1 2 ELQQAELPNRSPGFGIK 17 1 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 ELQQAELPNRS(1)PGFGIK;ELQQAELPNRS(1)PGFGIK 90.765 0.0048408 54461000 3326.5 3384.5 3670.8 2968.1 3261.9 3566 2963.66 3087 3344 3082.9 TRUE FALSE 3043.563707 3164.168435 3421.636323 3196.703576 3131.971616 3767.903838 2765.959649 3060.010684 3691.620767 3464.832927 0.878415719 0.913223957 0.987532847 0.922614061 0.903931497 1.08747057 0.798295245 0.88316255 1.065454192 1 11.75857007 ELQQAELPNRS(ph)PGFGIK ddPTM_A459_MK2206_30min_R2 2 ELQQAELPNRSPGFGIK 17 1 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 ELQQAELPNRS(1)PGFGIK;ELQQAELPNRS(1)PGFGIK 98.572 0.024378 7812600 34045 44587 46697 50312 40348 42781 53782 37283 41321 46068 TRUE FALSE 36651.51138 42372.87442 48253.85467 46201.34866 38763.73479 44409.06093 46720.3588 42156.01611 44915.02589 44564.80493 0.822431769 0.950814762 1.082779443 1.036722784 0.869828441 0.996505224 1.048368973 0.945948629 1.007858689 1 15.44361717 -4.819569997 3.765092336 0.996139363 0.811413824 0.476206133 0.055464176 0.213465888 5.2136431 0.014499043 0.101523635 1.52E-05 4.819569997 -0.184725539 ELRAPS(ph)PPVEHPR ddPTM_A459_MK2206_30min_R1 1 ELRAPSPPVEHPR 13 1 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 ELRAPS(1)PPVEHPR 64.537 0.043239 15223000 2938.6 2701.1 3151.5 3525.9 4038 3537.3 3055 3345.9 1606.3 996.34 TRUE FALSE 2688.656639 2525.257899 2937.584961 3797.465429 3877.157909 3737.578869 2851.206524 3316.647149 1773.280633 1119.774121 2.401070527 2.255149366 2.62337279 3.391278078 3.462446431 3.337797149 2.546233629 2.961889444 1.583605657 1 10.12899203 -8.391833329 2.990711513 1.010046718 2.891469456 0.71542464 0.405606331 0.145495285 2.431483802 0.441166602 0.119204093 4.06E-09 8.391833329 1.881422738 ELRAPS(ph)PPVEHPR ddPTM_A459_MK2206_30min_R2 1 ELRAPSPPVEHPR 13 1 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 ELRAPS(1)PPVEHPR 70.41 0.033523 19379000 6794.5 20734 15859 22883 24834 25249 21393 14988 23927 12663 TRUE FALSE 7314.692144 19704.37971 16387.73114 21013.3857 23858.89238 26209.86839 18584.0734 16946.98306 26008.12721 12249.80735 0.597127117 1.60854609 1.33779501 1.715405402 1.947695315 2.139614742 1.517091075 1.383448946 2.123145816 1 13.58047144 -4.628780261 2.11258479 1.687279879 6.21E-21 0.445373321 0.345134872 1.113106458 3.86297698 0.089943973 4.160093841 2.35E-05 4.628780261 -1.687279879 ELS(ph)APAR ddPTM_A459_MK2206_30min_R1 1 ELSAPAR 7 0 F5H672;F5H5N2;B4DNC9;B3KQ30;Q9H1K1 F5H672 ISCU "Iron-sulfur cluster assembly enzyme ISCU, mitochondrial" 1 ELS(1)APAR 90.601 0.029436 39740000 5184.3 5433.1 5601.6 4857.4 5755 4832.5 5433.7 4711.1 4305.9 4169.5 TRUE FALSE 4743.348061 5079.404202 5221.378999 5231.51779 5525.766164 5106.111974 5071.227787 4669.911349 4753.513714 4686.049138 1.012227555 1.083941728 1.114239063 1.116402674 1.179195096 1.08964115 1.082196887 0.996556206 1.014396899 1 12.19415637 -7.673475546 3.666744168 1.003269542 1.102640079 0.546973651 0.038941514 0.186049385 4.826623527 0.022195356 0.011634111 2.12E-08 7.673475546 0.099370537 ELS(ph)GTIK ddPTM_A459_MK2206_30min_R2 1 ELSGTIK 7 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 1 ELS(0.994)GT(0.006)IK 80.165 0.0454 4197300 53977 58607 63459 65063 53457 44652 54125 41630 47971 64066 TRUE FALSE 58109.52062 55696.6616 65574.69139 59747.14477 51358.00958 46351.26315 47018.32248 47071.18394 52143.43087 61975.53167 0.937620365 0.898687919 1.058073882 0.964044086 0.828682033 0.747896176 0.758659445 0.759512386 0.84135512 1 15.91941112 -6.301216949 4.448769609 0.801763542 0.967368498 0.429594285 0.078364181 0.176011605 8.099277889 0.023986088 0.028204087 5.00E-07 6.301216949 0.165604955 ELS(ph)PAALEK ddPTM_A459_MK2206_30min_R1 4 ELSPAALEK 9 0 O75683 O75683 SURF6 Surfeit locus protein 6 1 ELS(1)PAALEK;ELS(1)PAALEK;ELS(1)PAALEK;ELS(1)PAALEK 163.46 0.00095829 548724000 33739 34890.8 34196 30680 31077.7 27406.1 33524.7 31797.1 30830.1 28520.2 TRUE FALSE 30869.32088 32619.40258 31874.8708 33042.97892 29839.8094 28957.8097 31288.32843 31519.10131 34034.99922 32053.49769 0.963056237 1.017655012 0.994427226 1.03086968 0.930937699 0.903421211 0.976128369 0.983327985 1.061818574 1 14.96819417 -8.117812217 6.294650882 1.030295612 0.974494178 0.259870367 0.038002488 0.352484473 16.63565254 0.028558356 0.010580495 7.62E-09 8.117812217 -0.055801434 ELS(ph)PAALEK ddPTM_A459_MK2206_30min_R2 5 ELSPAALEK 9 0 O75683 O75683 SURF6 Surfeit locus protein 6 1 ELS(1)PAALEK;ELS(1)PAALEK;ELS(1)PAALEK;ELS(1)PAALEK;ELS(1)PAALEK 144.17 0.0019696 427128300 397597 446417 426567 445694 446176 351593 461156 340085 364967 422353 TRUE FALSE 428037.332 424248.5809 440788.5309 409279.3745 428656.8884 364973.118 400605.6633 384535.2772 396711.17 408571.6562 1.047643236 1.038370074 1.078852447 1.001732177 1.049159632 0.893290351 0.980502825 0.941169734 0.970970854 1 18.6402296 -6.735747952 24.99999151 0.954967108 1.042568227 0.648453355 0.031625159 132.6715325 129100.624 0.009875894 0.00987261 1.84E-07 6.735747952 0.087601119 ELS(ph)PAGSISK ddPTM_A459_MK2206_30min_R1 2 ELSPAGSISK 10 0 O95453;O95453-3;O95453-2;A0A494C0W0;A0A494C0K5;A0A494C0Q6;O95453-4 O95453 PARN Poly(A)-specific ribonuclease PARN 1 ELS(0.999)PAGS(0.001)ISK;ELS(1)PAGSISK 129.74 0.0028969 676600000 15553.9 16297.9 16054.9 12946.5 14001.4 12308.5 14787.9 15157.8 13705.4 12683.2 TRUE FALSE 14230.95913 15236.90375 14965.13812 13943.64167 13443.69459 13005.39663 13801.42617 15025.27695 15130.12538 14254.49057 0.998349191 1.068919557 1.049854293 0.978192914 0.943119961 0.912371899 0.968216023 1.054073233 1.061428699 1 13.79912886 -11.14186186 14.38828448 0.999999992 1.002303682 0 0.051209338 1.42E-08 3.81E-10 0.05662713 0.013734051 7.21E-12 11.14186186 0.00230369 ELS(ph)PAGSISK ddPTM_A459_MK2206_30min_R2 4 ELSPAGSISK 10 0 O95453;O95453-3;O95453-2;A0A494C0W0;A0A494C0K5;A0A494C0Q6;O95453-4 O95453 PARN Poly(A)-specific ribonuclease PARN 1 ELS(1)PAGSISK;ELS(1)PAGSISK;ELS(1)PAGSISK;ELS(1)PAGSISK 171.49 0.00017303 857120000 1444280 1664610 1591660 1690060 1496890 1336230 1718760 1356470 1296700 1437030 TRUE FALSE 1554855.187 1581947.888 1644725.15 1551976.692 1438114.577 1387081.169 1493084.747 1533765.286 1409484.622 1390139.829 1.118488338 1.137977529 1.183136484 1.116417687 1.034510736 0.997799747 1.074053643 1.103317274 1.013915718 1 20.40679857 -6.141332588 3.994408683 1.042416196 1.146128528 0.682790764 0.034229714 0.149654845 4.119619604 0.010828475 0.014323055 7.22E-07 6.141332588 0.103712331 ELS(ph)PPPGLPSK ddPTM_A459_MK2206_30min_R2 2 ELSPPPGLPSK 11 0 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;Q7Z4S6-3;H0YHT2;H0YI78;H0YIM6 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 ELS(1)PPPGLPSK;ELS(1)PPPGLPSK 132.56 0.0019874 17903400 223870 238290 240900 222960 212350 218900 254270 196310 182055 216760 TRUE FALSE 241009.6593 226456.8651 248931.4858 204743.4548 204012.072 227230.3929 220884.0436 221968.391 197889.8148 209687.139 1.149377404 1.079974987 1.187156671 0.976423522 0.972935551 1.083663948 1.053398147 1.05856941 0.943738447 1 17.67787885 -5.765240939 24.99999836 1.018114753 1.13295022 0.591888983 0.047782929 73.20721385 481432.8086 0.013669678 0.021163259 1.72E-06 5.765240939 0.114835468 ELS(ph)SPISPK ddPTM_A459_MK2206_30min_R2 1 ELSSPISPK 9 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 ELS(0.789)S(0.054)PIS(0.157)PK 85.533 0.035045 26364000 69374 60019 65325 65163 65103 51320 75278 55329 48714 83285 TRUE FALSE 74685.32678 57038.54374 67502.9029 59838.97445 62546.7291 53273.01856 65393.90817 62560.69027 52951.05567 80567.41727 0.926991696 0.707960434 0.837843699 0.742719284 0.776327841 0.661222866 0.811666929 0.776501127 0.657226674 1 16.29790889 -10.73330042 3.485708958 1.000410655 0.764988936 0.449302639 0.077537693 37069431.56 57510406.06 167122.4366 0.01792576 1.85E-11 10.73330042 -0.235421719 ELSDFISYLQR ddPTM_A459_MK2206_30min_R1 1 ELSDFISYLQR 11 0 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 169.93 0.0054369 7132400 2093.3 2131.9 2013.8 1967.3 2216.1 1739.2 2232 2022.9 1928.1 1606.5 FALSE TRUE 1915.253843 1993.112923 1877.108867 2118.821787 2127.828044 1837.672001 2083.107353 2005.213999 2128.532895 1805.525348 1.060773721 1.103896395 1.03964692 1.17352093 1.178509095 1.017804598 1.153740297 1.110598641 1.17889948 1 10.81820296 -5.745870871 24.99711324 1.120828001 1.071684763 0.109011057 0.061692877 531.6594729 853637.1795 0.016142957 0.027840525 1.80E-06 5.745870871 -0.049143237 ELSDIAHR ddPTM_A459_MK2206_30min_R1 7 ELSDIAHR 8 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ;;;;;; 162.25 0.00052817 324170200 68226.2 61976.3 67174.5 53477.1 77585.7 68487.7 77052.8 65027.8 53880.7 49059.1 FALSE TRUE 62423.20342 57941.63161 62614.8821 57595.91551 74495.29728 72365.41439 71912.7483 64459.2688 59481.79158 55136.91169 1.132149072 1.050868281 1.135625485 1.044598142 1.351096661 1.312467677 1.304257821 1.169076519 1.078801655 1 15.75073084 -6.235348307 24.973106 1.221645174 1.091158331 0.19962744 0.10562874 1086.585285 1040026.966 0.031740817 0.040962278 5.82E-07 6.235348307 -0.130486843 ELSDIAHR ddPTM_A459_MK2206_30min_R2 6 ELSDIAHR 8 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ;;;;; 144.12 0.0029622 265992800 591823 799368 739069 931480 831655 909787 898141 689383 767627 735326 FALSE TRUE 637133.4239 759672.5475 763709.1916 855375.1043 799000.046 944409.5818 780214.0078 779487.7251 834393.8089 711332.3728 0.895690184 1.067957226 1.073631991 1.202497084 1.123244318 1.327662873 1.096834669 1.095813652 1.173001315 1 19.4401643 -4.516339001 1.189769119 1.151829399 0.641939794 0.441350655 0.082346215 2.325355153 1.858204303 0.024407659 1.707438004 3.05E-05 4.516339001 -0.509889605 ELSDQATAS(ph)PIVAR ddPTM_A459_MK2206_30min_R2 3 ELSDQATASPIVAR 14 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 ELSDQAT(0.002)AS(0.998)PIVAR;ELSDQATAS(1)PIVAR;ELS(0.001)DQAT(0.099)AS(0.901)PIVAR 222.09 5.44E-09 56919600 103476 106748 107355 129920 118131 124276 120327 95738 105025 119882 TRUE FALSE 111398.2021 101447.0495 110934.1621 119305.1204 113492.5834 129005.4103 104527.9204 108251.2853 114159.8847 115970.2602 0.960575599 0.874767802 0.956574228 1.028756168 0.97863524 1.112400801 0.901333844 0.933440049 0.984389312 1 16.82339536 -5.519703231 24.39418198 0.98953872 0.91717152 0.216616838 0.056122268 136.0460196 1045096.72 0.01559579 0.02775189 3.02E-06 5.519703231 -0.0723672 ELSDS(ph)CEGAFGGGR ddPTM_A459_MK2206_30min_R2 2 ELSDSCEGAFGGGR 14 0 H0Y7R3;F8W9F9;H0Y7T5;Q9Y3S1-2;Q9Y3S1-4;Q9Y3S1 H0Y7R3 WNK2 Serine/threonine-protein kinase WNK2 1 ELS(0.07)DS(0.93)CEGAFGGGR;ELS(0.401)DS(0.599)CEGAFGGGR 145.61 0.00029828 0 14201.1 11218.1 13800.9 16248.5 12806.8 14397.5 17512.3 13866.6 10264.8 18712.4 TRUE FALSE 15288.34713 10661.02547 14261.01512 14920.94557 12303.94068 14945.40695 15212.91397 15679.01223 11157.61375 18101.81592 0.844575329 0.588947844 0.787822348 0.824278936 0.679707535 0.825630258 0.840408169 0.866156871 0.616380909 1 14.14384681 -12.04598948 2.296227923 4.723483832 0.765725783 0.357151296 0.095047288 3680355.246 441446.8968 71686391.35 0.023057353 9.00E-13 12.04598948 -3.95775805 ELSESVQQQSTPVPLIS(ph)PK ddPTM_A459_MK2206_30min_R1 4 ELSESVQQQSTPVPLISPK 19 0 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;A0A087WYS3;Q9ULU4-8;Q9ULU4-17;Q9ULU4-2;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ELSESVQQQST(0.028)PVPLIS(0.972)PK;ELSESVQQQSTPVPLIS(1)PK;ELSESVQQQSTPVPLIS(1)PK;ELSESVQQQS(0.019)T(0.383)PVPLIS(0.598)PK 159.53 1.38E-06 37225200 15009.7 17970.6 17353.5 15069.6 10829 10225.5 12772.6 13299.3 15457.5 16424.4 TRUE FALSE 13733.0462 16800.71067 16175.59277 16230.2632 10397.658 10804.45897 11920.56316 13183.02562 17064.36244 18459.17867 0.743968431 0.910154833 0.876289951 0.879251645 0.563278474 0.585316344 0.645779716 0.714171841 0.924437796 1 14.17205074 -6.214240902 24.99505146 0.712210883 0.858245733 0.124386251 0.136778506 673.7872348 356819.2923 0.040579136 0.052387289 6.11E-07 6.214240902 0.14603485 ELSESVQQQSTPVPLIS(ph)PK ddPTM_A459_MK2206_30min_R2 2 ELSESVQQQSTPVPLISPK 19 0 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;A0A087WYS3;Q9ULU4-8;Q9ULU4-17;Q9ULU4-2;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ELSESVQQQSTPVPLIS(1)PK;ELSESVQQQSTPVPLIS(1)PK 176.22 5.85E-13 17526700 145177 126339 141848 114568 124072 83004 135627 113181 90755 139872 TRUE FALSE 156291.8627 120065.189 146577.1415 105207.4279 119200.3099 86162.77538 117819.012 127974.1453 98648.70585 135307.9881 1.155082305 0.887347382 1.083285204 0.777540405 0.880955452 0.636790012 0.870746906 0.945798893 0.729067864 1 17.04588749 -5.762661871 24.99999194 0.827374568 1.026449223 0.39618212 0.116692854 32.70325953 668807.8193 0.031159127 0.049288231 1.73E-06 5.762661871 0.199074655 ELSESVQQQSTPVPLIS(ph)PKR ddPTM_A459_MK2206_30min_R1 2 ELSESVQQQSTPVPLISPKR 20 1 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;A0A087WYS3;Q9ULU4-8;Q9ULU4-17;Q9ULU4-2;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ELSESVQQQSTPVPLIS(1)PKR;ELSESVQQQSTPVPLIS(1)PKR 207.24 6.19E-17 66411000 4829.6 4584.9 5337.4 5058.6 5481.1 4327.2 3679.3 5261.4 2680 1887.54 TRUE FALSE 4418.817159 4286.422177 4975.112159 5448.214249 5262.776181 4572.202325 3433.86061 5215.400135 2958.59559 2121.382705 2.08298915 2.020579392 2.345221419 2.568237327 2.480823553 2.155293485 1.61868983 2.458490927 1.394654337 1 11.0507892 -8.542691424 0.92089777 0.977737774 2.262372644 0.658786786 0.287663737 0.403370871 0.754465264 0.283241827 0.097391517 2.87E-09 8.542691424 1.28463487 ELSESVQQQSTPVPLIS(ph)PKR ddPTM_A459_MK2206_30min_R2 3 ELSESVQQQSTPVPLISPKR 20 1 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;A0A087WYS3;Q9ULU4-8;Q9ULU4-17;Q9ULU4-2;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ELSESVQQQST(0.001)PVPLIS(0.999)PKR;ELSESVQQQSTPVPLIS(1)PKR;ELSESVQQQSTPVPLIS(1)PKR 200.33 5.20E-16 42924500 29707.2 78065 59478 69335.2 84441 75470 65721.6 47949.5 86815 60945.4 TRUE FALSE 31981.60607 74188.40562 61460.96683 63670.29237 81125.42206 78342.06373 57092.27497 54216.66429 94366.01177 58956.75659 0.542458709 1.2583529 1.042475373 1.079949035 1.376015689 1.328805522 0.968375438 0.919600525 1.600597069 1 15.84736954 -4.756507591 24.98565028 1.169929274 0.542457739 0.462856125 0.204331148 139.1693076 704984.387 0.050048423 0.403009762 1.75E-05 4.756507591 -0.627471535 ELSKEDLSPAFDHS(ph)PNK ddPTM_A459_MK2206_30min_R1 2 ELSKEDLSPAFDHSPNK 17 1 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-2;P17706-4;P17706;P17706-3 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 ELSKEDLSPAFDHS(1)PNK;ELSKEDLSPAFDHS(1)PNK 160.67 1.37E-05 36484000 19164.7 15028.9 17294.6 16238.5 14423.3 16318.7 15689.8 15250.6 14361.1 12036.8 TRUE FALSE 17534.64163 14050.51588 16120.69074 17489.19208 13848.78942 17242.65069 14643.16207 15117.26561 15853.98774 13528.00966 1.296173057 1.038624028 1.191652811 1.292813394 1.023712266 1.274588881 1.082432852 1.117478919 1.171937938 1 13.72366197 -14.52287874 0.166044668 0.374015308 1.201883801 0.239026468 0.093939816 198.3976551 1.847450565 40.75676421 0.343645696 3.00E-15 14.52287874 0.827868493 ELSKEDLSPAFDHS(ph)PNK ddPTM_A459_MK2206_30min_R2 4 ELSKEDLSPAFDHSPNK 17 1 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-2;P17706-4;P17706;P17706-3 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 ELSKEDLSPAFDHS(1)PNK;ELSKEDLSPAFDHS(1)PNK;ELSKEDLS(0.001)PAFDHS(0.999)PNK;ELSKEDLSPAFDHS(1)PNK 95.236 0.0027725 60614000 286637 355079 304725 282473 324924 235371 358768 261683 247997 298170 TRUE FALSE 308582.1491 337446.2932 314884.3794 259394.0523 312165.8511 244328.2083 311661.3306 295885.8666 269567.3308 288440.7373 1.069828596 1.169898178 1.091677904 0.899297564 1.082252993 0.847065538 1.080503862 1.025811643 0.934567472 1 18.13791541 -5.594072297 7.710466355 0.985426176 1.122574344 0.39391603 0.073788193 0.216779702 20.13080955 0.018957792 0.032987759 2.55E-06 5.594072297 0.137148168 ELSNS(ph)PLR ddPTM_A459_MK2206_30min_R1 2 ELSNSPLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ELS(0.006)NS(0.994)PLR;ELS(0.002)NS(0.998)PLR 131.09 0.0036569 901660000 9679.6 9717.2 9038.8 7146.8 8717.5 9223.7 11526.4 7950.4 10685.5 12008.2 TRUE FALSE 8856.29919 9084.608514 8425.27144 7697.247774 8370.263515 9745.937923 10757.49489 7880.890491 11796.29596 13495.86647 0.656223089 0.673140071 0.624285329 0.570341133 0.62020942 0.722142438 0.797095534 0.583948464 0.874067329 1 13.72022998 -8.754096416 0.571842365 1.012189063 0.633377179 0.706218798 0.071447209 0.681671689 0.476210131 0.084148366 0.033478686 1.76E-09 8.754096416 -0.378811884 ELSNS(ph)PLR ddPTM_A459_MK2206_30min_R2 3 ELSNSPLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ELS(0.003)NS(0.997)PLR;ELS(0.001)NS(0.999)PLR;ELS(0.001)NS(0.999)PLR 131.09 0.0036569 1317340000 518950 386610 398694 485470 363346 383363 460960 379940 336192 432020 TRUE FALSE 558681.211 367411.5096 411986.259 445805.5481 349079.2104 397952.1476 400435.3983 429599.4625 365433.3725 417923.2228 1.336803462 0.879136381 0.985794128 1.066716382 0.835271149 0.952213531 0.958155413 1.02793872 0.874403126 1 18.6728784 -4.754425055 24.99995217 0.955155489 1.33680412 0.736358577 0.068835157 122.9296756 438099.0236 0.016646658 0.162643945 1.76E-05 4.754425055 0.381648631 ELSNS(ph)PLRENS(ph)FGSPLEFR ddPTM_A459_MK2206_30min_R2 1 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ELS(0.07)NS(0.928)PLRENS(0.542)FGS(0.459)PLEFR 67.136 0.041962 5519300 15753 29113 22204 31042 27552 29685 30180 16473 23777 20857 TRUE FALSE 16959.06179 27667.29075 22944.27028 28505.7693 26470.17004 30814.68348 26217.32975 18626.07766 25845.08048 20176.4378 0.840537956 1.371267368 1.137181425 1.412824681 1.311934758 1.527260847 1.299403295 0.923159868 1.280953592 1 14.30038386 -7.732920781 24.68427823 1.0765425 1.286988556 0.185075833 0.193487495 284.6047101 246339.7887 0.089488771 0.05165252 1.85E-08 7.732920781 0.210446056 ELSNS(ph)PLRENSFGS(ph)PLEFR ddPTM_A459_MK2206_30min_R1 3 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ELS(0.071)NS(0.929)PLRENS(0.421)FGS(0.579)PLEFR;ELS(0.04)NS(0.955)PLRENS(0.257)FGS(0.748)PLEFR;ELS(0.005)NS(0.987)PLRENS(0.406)FGS(0.602)PLEFR 87.457 0.0066117 59929000 17187.4 17313.4 18635.4 16330.8 20415.8 16473.9 17829.6 18304.6 12926.4 10915.8 TRUE FALSE 15725.52138 16186.29451 17370.48097 17588.60105 19602.59545 17406.63798 16640.21992 18144.56481 14270.14554 12268.13171 1.28181876 1.319377301 1.415902712 1.433682117 1.597846837 1.418849943 1.356377671 1.478999838 1.163188159 1 13.58262794 -8.458896234 3.516853784 1.002152955 1.414509819 0.729305922 0.083418314 0.114271439 2.866511559 0.086668502 0.022921067 3.48E-09 8.458896234 0.412356864 ELSNS(ph)PLRENSFGS(ph)PLEFR ddPTM_A459_MK2206_30min_R2 1 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ELS(0.003)NS(0.975)PLRENS(0.133)FGS(0.889)PLEFR 108.55 0.025218 2283300 9131.7 13398 9764.1 12247 13746 12999 11014 9951.7 11643 10337 TRUE FALSE 9830.829973 12732.6748 10089.63022 11246.38092 13206.26297 13493.68605 9567.84857 11252.42136 12655.68709 9999.704537 0.983112045 1.273305102 1.008992834 1.124671322 1.320665318 1.349408475 0.956813127 1.125275384 1.265606103 1 13.28766975 -4.734950803 24.25843279 1.161251219 0.983110761 0.134091337 0.133369371 4018.636092 3680015.191 0.033583683 2.585510056 1.84E-05 4.734950803 -0.178140458 ELSNS(ph)PLRENSFGSPLEFR ddPTM_A459_MK2206_30min_R1 6 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ELS(0.005)NS(0.929)PLRENS(0.031)FGS(0.035)PLEFR;ELS(0.024)NS(0.975)PLRENSFGSPLEFR;ELS(0.061)NS(0.936)PLRENS(0.002)FGSPLEFR;ELS(0.066)NS(0.933)PLRENS(0.001)FGSPLEFR;ELS(0.082)NS(0.904)PLRENS(0.012)FGS(0.002)PLEFR;ELS(0.009)NS(0.987)PLRENS(0.002)FGS(0.002)PLEFR 114.78 0.00026381 1746079000 17305.7 18595.6 19145.9 17613.2 21422 17413.2 18678.1 18849.3 12441.51 10007.45 TRUE FALSE 15833.75934 17385.02306 17846.32965 18969.77172 20568.71638 18399.12034 17432.11803 18684.50256 13734.84949 11247.24846 1.407789594 1.545713436 1.586728498 1.686614445 1.82877763 1.635877469 1.54990068 1.661250983 1.221174187 1 13.45728448 -8.425430994 3.08054514 1.003759595 1.61888635 0.794627064 0.104742565 0.106798768 1.958367552 0.108983413 0.029210917 3.75E-09 8.425430994 0.615126756 ELSNS(ph)PLRENSFGSPLEFR ddPTM_A459_MK2206_30min_R2 3 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ELS(0.006)NS(0.994)PLRENSFGSPLEFR;ELS(0.043)NS(0.766)PLRENS(0.069)FGS(0.122)PLEFR;ELS(0.102)NS(0.891)PLRENS(0.005)FGS(0.001)PLEFR 113.25 0.0025556 544306000 44896.9 79817 62833 86842 81167 81781 75591 57671 80118 73167 TRUE FALSE 48334.24118 75853.40384 64927.82086 79746.73081 77979.97575 84893.23326 65665.8109 65208.79771 87086.51882 70779.56678 0.682884106 1.071685054 0.917324361 1.126691423 1.101730051 1.19940312 0.927750958 0.921294106 1.230390673 1 16.11104531 -4.759643489 24.9981498 1.052593871 0.682883643 0.519451469 0.107388684 38.65773032 537948.8013 0.026734304 0.167626131 1.74E-05 4.759643489 -0.369710228 ELSNSPLRENS(ph)FGSPLEFR ddPTM_A459_MK2206_30min_R2 2 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ELS(0.004)NS(0.179)PLRENS(0.785)FGS(0.033)PLEFR;ELS(0.003)NS(0.091)PLRENS(0.804)FGS(0.102)PLEFR 122.5 0.0019944 98496000 12034.7 20540.2 18910.6 16168 24536.7 21308.5 19910.2 15050.1 22087.9 14911.3 TRUE FALSE 12956.08589 19520.20354 19541.06997 14847.02268 23573.26587 22119.4099 17295.96682 17017.19974 24009.06562 14424.7455 0.898184712 1.353244224 1.354690796 1.029274498 1.63422404 1.533435019 1.199048317 1.179722702 1.664435994 1 13.81625824 -4.760122841 24.88983591 1.336706967 0.898184155 0.253386634 0.220613198 43.84502991 828578.0794 0.053403379 0.323242652 1.74E-05 4.760122841 -0.438522812 ELSNSVSTYRPFGLGS(ph)ESPYK ddPTM_A459_MK2206_30min_R1 2 ELSNSVSTYRPFGLGSESPYK 21 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ELS(0.001)NS(0.005)VS(0.023)T(0.023)Y(0.016)RPFGLGS(0.739)ES(0.19)PY(0.003)K;ELSNS(0.001)VS(0.005)T(0.004)Y(0.003)RPFGLGS(0.496)ES(0.425)PY(0.065)K 81.38 0.00098282 32324000 3319.1 3626.7 3341.4 3174.9 2689.1 2992.3 3269.3 2842.3 3839.7 4281.7 TRUE FALSE 3036.793116 3390.601171 3114.595078 3419.431348 2581.987453 3161.72144 3051.210962 2817.450071 4238.850556 4812.149321 0.631067931 0.704591845 0.647235751 0.710582968 0.536555971 0.657028955 0.634064065 0.585486834 0.880864303 1 12.23246569 -8.424829595 3.728253789 0.996628726 0.640766076 0.861227973 0.049474721 0.072102952 1.759174915 0.047523972 0.012546868 3.76E-09 8.424829595 -0.355862649 ELSNSVSTYRPFGLGS(ph)ESPYKQPSDGMERPSSLMDSSQEK ddPTM_A459_MK2206_30min_R1 1 ELSNSVSTYRPFGLGSESPYKQPSDGMERPSSLMDSSQEK 40 3 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ELSNSVS(0.002)T(0.007)Y(0.007)RPFGLGS(0.25)ES(0.25)PY(0.226)KQPS(0.25)DGMERPS(0.003)S(0.003)LMDS(0.001)SQEK 58.001 4.71E-05 29883000 3690.2 4108.1 3555.6 3520.7 2904.1 2745.2 3145.2 3194.5 3492 2705.2 TRUE FALSE 3376.329112 3840.661943 3314.255778 3791.864924 2788.423547 2900.630852 2935.389447 3166.570823 3855.005896 3040.340599 1.110510156 1.263234107 1.090093583 1.247184255 0.917141832 0.954047995 0.965480462 1.041518448 1.267951984 1 11.57001724 -6.253992847 24.97758585 1.019973453 1.177599571 0.350190106 0.102264401 669.9956979 2247335.212 0.031209307 0.039459058 5.57E-07 6.253992847 0.157626118 ELSNSVSTYRPFGLGSES(ph)PYK ddPTM_A459_MK2206_30min_R2 1 ELSNSVSTYRPFGLGSESPYK 21 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ELS(0.001)NS(0.001)VS(0.017)T(0.014)Y(0.013)RPFGLGS(0.089)ES(0.825)PY(0.04)K 59.55 0.012243 6951400 16608 11147 13366 11920 10758 9154.5 15221 13674 11087 14836 TRUE FALSE 17879.52125 10593.45619 13811.61577 10946.09787 10335.58687 9502.880912 13222.46442 15461.23875 12051.32722 14351.90254 1.2457945 0.738122083 0.962354345 0.762693158 0.720154477 0.66213388 0.921303944 1.077295412 0.839702415 1 13.80895438 -9.729443757 12.10721806 1.00000309 0.871550587 0.039400705 0.170456361 0 0 0.165900102 0.040236685 1.86E-10 9.729443757 -0.128452504 ELSPLISLPS(ph)PVPPLS(ph)PIHSNQQTLPR ddPTM_A459_MK2206_30min_R1 1 ELSPLISLPSPVPPLSPIHSNQQTLPR 27 0 A0A669KBI3;F5GXF9;P51825;P51825-3;P51825-2;E7ETI4;E7EMC5 A0A669KBI3 AFF1 AF4/FMR2 family member 1 2 ELS(0.002)PLIS(0.112)LPS(0.971)PVPPLS(0.915)PIHSNQQTLPR 116.97 3.33E-11 3105900 333.98 490.81 456.7 520.8 588.55 577.42 413.5 391.98 403.27 348.46 TRUE FALSE 305.5732472 458.8581798 425.7004764 560.9121062 565.1068072 610.1130214 385.9161695 388.5529602 445.1913596 391.6298555 0.780260348 1.171662919 1.086996996 1.432250627 1.442961509 1.557881793 0.985410494 0.992143359 1.13676563 1 8.613346941 ELSS(ph)PISPK ddPTM_A459_MK2206_30min_R1 1 ELSSPISPK 9 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 ELS(0.057)S(0.748)PIS(0.196)PK 147.73 0.0016076 19810000 7051.5 8529.8 8874.5 7940.1 5854.6 4930.9 6169.7 6485.7 7988.8 7239.1 TRUE FALSE 6451.732896 7974.50847 8272.123666 8551.647878 5621.398885 5210.083297 5758.13057 6428.996209 8819.264348 8135.93436 0.79299225 0.9801589 1.016739234 1.051095977 0.690934641 0.64037922 0.707740539 0.79019765 1.083989123 1 12.99009232 -6.257872274 24.99756788 0.793902046 0.965704086 0.174833892 0.144281202 479.0860465 3357337.87 0.044969636 0.05575344 5.52E-07 6.257872274 0.171802039 ELSSEPQT(ph)PPAQK ddPTM_A459_MK2206_30min_R1 2 ELSSEPQTPPAQK 13 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 ELSSEPQT(1)PPAQK;ELSS(0.002)EPQT(0.998)PPAQK 198.29 0.00027829 13614500 8272.4 7707 6750.2 4788.6 5736.8 4920 5403.4 4863.1 4293.3 3847.9 TRUE FALSE 7568.78894 7205.272899 6292.015231 5157.418802 5508.291108 5198.566148 5042.949045 4820.582429 4739.603899 4324.606902 1.750168076 1.666110484 1.454933448 1.192575168 1.273709087 1.20208987 1.166105766 1.114686846 1.095961785 1 12.07835329 -1.522878745 0.302366649 1.034858481 7.936540515 0.948378608 0.054039586 11.20843137 0.159831973 0.057139988 41.9538591 0.03 1.522878745 6.901682034 ELSSEPQT(ph)PPAQK ddPTM_A459_MK2206_30min_R2 2 ELSSEPQTPPAQK 13 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 ELSSEPQT(1)PPAQK;ELSS(0.005)EPQT(0.995)PPAQK 144.8 0.00152 17875500 148738 152904 131506 140812 122680 116905 125483 86038 86307 109717 TRUE FALSE 160125.4956 145311.0097 135890.3444 129307.2092 117862.9668 121353.9017 109006.9314 97283.46201 93813.82685 106136.9433 1.508668807 1.369089831 1.2803303 1.218305381 1.110480132 1.143370988 1.027040425 0.916584358 0.883894184 1 16.69556738 -5.519808799 0.418834852 0.912609479 1.688436724 0.93072166 0.05012273 0.750681936 0.162390507 0.046130008 0.274861149 3.02E-06 5.519808799 0.775827245 ELSSPIS(ph)PK ddPTM_A459_MK2206_30min_R1 1 ELSSPISPK 9 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 ELS(0.32)S(0.206)PIS(0.474)PK 125.23 0.0050952 20303000 6429.5 7870.1 7573.9 6354.2 4400.6 4284.8 5585.3 5249.8 6554.1 5700.6 TRUE FALSE 5882.637262 7357.75506 7059.80477 6843.601585 4225.314784 4527.401673 5212.714828 5203.901552 7235.422149 6406.833365 0.918181717 1.148423041 1.101917963 1.068172246 0.659501277 0.70665201 0.813617981 0.812242375 1.129328911 1 12.64539575 -6.22502196 23.30510919 0.834827019 1.068602042 0.339931551 0.138653931 278.2108756 178038.6828 0.041794418 0.053953494 5.96E-07 6.22502196 0.233775022 ELSSPIS(ph)PK ddPTM_A459_MK2206_30min_R2 1 ELSSPISPK 9 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 ELS(0.313)S(0.313)PIS(0.374)PK 138.99 0.0024186 25573000 68838 77296 70611 58036 58300 45860 75998 61559 51146 79020 TRUE FALSE 74108.29021 73457.59304 72965.1355 53294.27315 56010.84907 47605.23444 66019.37131 69604.97266 55594.58663 76441.58387 0.969476121 0.960963775 0.954521503 0.697189546 0.732727479 0.622766196 0.863657815 0.910564239 0.727281982 1 16.22207005 -5.73999338 23.33652488 0.783011616 0.961585129 0.350559803 0.104234496 120.6194614 131249.7414 0.028685566 0.049603053 1.82E-06 5.73999338 0.178573513 ELST(ph)SPCNPIVR ddPTM_A459_MK2206_30min_R1 1 ELSTSPCNPIVR 12 0 H3BSS6;Q9H2Y7;H3BNX5 H3BSS6 ZNF106 Zinc finger protein 106 1 ELS(0.003)T(0.499)S(0.499)PCNPIVR 217.91 1.06E-07 45439000 5492.3 4665.8 5236.4 5009.9 5317.1 4249.4 5144.7 4922.9 4642.1 3729.4 TRUE FALSE 5025.151044 4362.055572 4880.967757 5395.763366 5105.308648 4489.997356 4801.50645 4879.859604 5124.662907 4191.426228 1.198911962 1.040709137 1.164512386 1.287333493 1.218036146 1.071233779 1.145554327 1.164248 1.222653729 1 12.03322552 -6.743301331 24.99439595 1.132554458 1.178948007 0.119216811 0.079758703 751.8602031 1036068.36 0.027639556 0.027585675 1.81E-07 6.743301331 0.046393548 ELST(ph)SPCNPIVR ddPTM_A459_MK2206_30min_R2 2 ELSTSPCNPIVR 12 0 H3BSS6;Q9H2Y7;H3BNX5 H3BSS6 ZNF106 Zinc finger protein 106 1 ELS(0.025)T(0.487)S(0.487)PCNPIVR;ELS(0.005)T(0.498)S(0.498)PCNPIVR 206.32 2.45E-05 62571200 111082 131696 107168 117919 130806 140758 158584 100830 118648 119850 TRUE FALSE 119586.5233 125156.1681 110740.9276 108284.6405 125669.8992 146114.6443 137761.7303 114008.8272 128967.7886 115939.3043 1.031458003 1.079497319 0.955162947 0.933976973 1.083928353 1.260268424 1.188222847 0.983349244 1.112373318 1 16.82301021 -6.508271709 24.44709365 1.11935612 1.00330319 0.269337311 0.08432868 693.7585953 1161112.608 0.028329644 0.030962102 3.10E-07 6.508271709 -0.11605293 ELSVQDQPSLS(ph)PTSLQNSSSHTTTAK ddPTM_A459_MK2206_30min_R1 2 ELSVQDQPSLSPTSLQNSSSHTTTAK 26 0 O95628-3;O95628-2;O95628;O95628-8;O95628-4;O95628-7;O95628-9;O95628-10;O95628-6 O95628-3 CNOT4 CCR4-NOT transcription complex subunit 4 1 ELSVQDQPS(0.006)LS(0.329)PT(0.329)S(0.329)LQNS(0.001)SS(0.004)HTTTAK;ELSVQDQPSLS(0.5)PT(0.5)SLQNSSSHTTTAK 207.12 4.09E-33 12576000 5717.17 1606.5 2244.18 1402.53 7319.77 6612.26 5930.82 4140.42 1682.25 1539.78 TRUE FALSE 5230.894669 1501.916558 2091.851314 1510.553104 7028.208061 6986.640447 5535.185819 4104.220744 1857.125907 1730.539571 3.022695786 0.867889173 1.2087856 0.87287984 4.061281336 4.037261305 3.198531783 2.37164224 1.073148478 1 10.75700622 -6.241185129 24.94750102 2.79165166 1.428101842 0.182798202 1.134974539 1213.274213 1494410.08 0.347202817 0.447681766 5.74E-07 6.241185129 -1.363549818 ELSVQDQPSLSPT(ph)SLQNSSSHTTTAK ddPTM_A459_MK2206_30min_R1 1 ELSVQDQPSLSPTSLQNSSSHTTTAK 26 0 O95628-3;O95628-2;O95628;O95628-8;O95628-4;O95628-7;O95628-9;O95628-10;O95628-6 O95628-3 CNOT4 CCR4-NOT transcription complex subunit 4 1 ELSVQDQPSLS(0.005)PT(0.995)SLQNSSSHTTTAK 196.68 8.71E-32 9748900 4297.6 1067.2 1677.9 741.71 5647.3 5864 4528.7 3243 1104.8 1191.3 TRUE FALSE 3932.066552 997.725086 1564.008823 798.8366327 5422.356083 6196.014612 4226.598686 3214.646793 1219.647914 1338.887238 2.936816814 0.74518978 1.16814081 0.596642204 4.049897504 4.627734463 3.156799592 2.400983968 0.910941474 1 10.38681875 -4.4801235 22.72793416 2.195623286 9.881854227 0.027284176 1.382594338 1618.281826 893075.2931 0.369728589 22441.64342 3.31E-05 4.4801235 7.686230942 ELSVQDQPSLSPT(ph)SLQNSSSHTTTAK ddPTM_A459_MK2206_30min_R2 3 ELSVQDQPSLSPTSLQNSSSHTTTAK 26 0 O95628-3;O95628-2;O95628;O95628-8;O95628-4;O95628-7;O95628-9;O95628-10;O95628-6 O95628-3 CNOT4 CCR4-NOT transcription complex subunit 4 1 ELSVQDQPS(0.019)LS(0.141)PT(0.615)S(0.224)LQNSSSHTTTAK;ELSVQDQPSLS(0.013)PT(0.971)S(0.016)LQNSSSHTTTAK;ELSVQDQPS(0.005)LS(0.111)PT(0.777)S(0.107)LQNSSSHTTTAK 151 6.44E-11 44442000 29466.3 110399 61257 157342 141078 172173 121355 71492 132137 59635 TRUE FALSE 31722.26258 104916.7462 63299.27781 144486.6553 135538.5689 178725.1642 105420.9427 80836.24987 143630.0374 57689.11483 0.549882984 1.818657584 1.097248207 2.504573969 2.34946522 3.098074302 1.827397474 1.401239213 2.489725104 1 15.81601151 -5.752820805 24.99913013 2.153650096 1.221602146 0.313205898 0.63190131 231.4753434 671412.8459 0.171477048 0.291161063 1.77E-06 5.752820805 -0.932047951 ELT(ph)DEEAER ddPTM_A459_MK2206_30min_R1 1 ELTDEEAER 9 0 A0A0A0MSS4;A0A0A0MSU9;Q9Y266 A0A0A0MSS4 NUDC Nuclear migration protein nudC 1 ELT(1)DEEAER 110.84 0.024836 3091600 1741.5 1647.6 1682.5 1773.9 1527.4 1386.9 1775.7 1644.4 1180.5 1452.7 TRUE FALSE 1593.37628 1540.340941 1568.296588 1910.526085 1466.560424 1465.425079 1657.246293 1630.023184 1303.217199 1632.671443 0.975931983 0.943448204 0.960570845 1.170184052 0.898258146 0.897562755 1.015051926 0.99837796 0.798211548 1 10.67301878 ELT(ph)DEEAER ddPTM_A459_MK2206_30min_R2 2 ELTDEEAER 9 0 A0A0A0MSS4;A0A0A0MSU9;Q9Y266 A0A0A0MSS4 NUDC Nuclear migration protein nudC 1 ELT(1)DEEAER;ELT(1)DEEAER 112.13 0.023093 28186000 80734 81539 66410 64680 62374 51932 68779 69048 64017 83743 TRUE FALSE 86915.05711 77489.89183 68624.07625 59395.4371 59924.88336 53908.30865 59748.23468 78072.81068 69585.08294 81010.47277 1.072886679 0.956541657 0.847101293 0.733182206 0.739717734 0.665448637 0.737537168 0.963737255 0.85896404 1 16.30582081 -5.079228854 2.047963105 0.799979877 1.079600027 0.398039965 0.100714367 0.420495222 2.899162528 0.02928511 0.174428489 8.33E-06 5.079228854 0.27962015 ELT(ph)PASPTCTNSVSK ddPTM_A459_MK2206_30min_R1 1 ELTPASPTCTNSVSK 15 0 A0A494C0S2;A0A090HNM7;A0A1W2PS85;R4GMW8;P28715 A0A494C0S2 ERCC5-201;BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells 1 ELT(0.587)PAS(0.369)PT(0.043)CT(0.001)NSVSK 157.09 0.000369 13594000 4375.9 4268.9 3800.7 3237 4146.9 3403.4 4118 3287.5 3369.4 3486.6 TRUE FALSE 4003.706726 3990.993834 3542.719073 3486.314301 3981.720192 3596.097567 3843.295734 3258.757734 3719.661188 3918.54633 1.02173265 1.018488362 0.904090133 0.889695823 1.016121759 0.917712147 0.980796298 0.831624143 0.949245173 1 11.93610284 -5.248410042 23.56057939 0.932278808 1.020110551 0.290737403 0.052167356 426.2790384 770819.4499 0.012976561 0.033790037 5.64E-06 5.248410042 0.087831743 ELT(ph)PASPTCTNSVSK ddPTM_A459_MK2206_30min_R2 1 ELTPASPTCTNSVSK 15 0 A0A494C0S2;A0A090HNM7;A0A1W2PS85;R4GMW8;P28715 A0A494C0S2 ERCC5-201;BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells 1 ELT(0.705)PAS(0.294)PTCTNSVSK 193.98 7.44E-05 40049000 43886 45975 41738 51137 41495 38608 54562 44597 36962 47896 TRUE FALSE 47245.9459 43691.94835 43129.52409 46958.94352 39865.6978 40077.25449 47397.94386 50425.98102 40176.88795 46333.15744 1.019700545 0.942995271 0.930856572 1.013506226 0.86041401 0.864979999 1.022981089 1.088334657 0.86713037 1 15.49975738 -7.302207267 24.96527358 1.00197276 0.938414936 0.127253487 0.070630795 1008.131725 617351.6441 0.029779398 0.020077487 4.99E-08 7.302207267 -0.063557824 ELTHIYR ddPTM_A459_MK2206_30min_R2 2 ELTHIYR 7 0 P22059 P22059 OSBP Oxysterol-binding protein 1 0 ; 104.45 0.025267 2642200 19346.3 22745 19512.3 22555 21093 19270.5 23728 18346.7 20016.8 21639.2 FALSE TRUE 20827.4676 21615.51637 20162.83034 20712.18435 20264.78284 20003.85238 20612.4851 20744.67668 21757.82508 20933.11468 0.994953113 1.032599148 0.963202593 0.989445893 0.968072986 0.955608025 0.98468314 0.990998091 1.039397405 1 14.35349937 -8.097877026 6.102109474 1.019322787 0.983908803 0.291686177 0.021873298 0.309054516 15.80574278 0.01582577 0.005863066 7.98E-09 8.097877026 -0.035413984 ELTPAS(ph)PTCTNSVSK ddPTM_A459_MK2206_30min_R1 3 ELTPASPTCTNSVSK 15 0 A0A494C0S2;A0A090HNM7;A0A1W2PS85;R4GMW8;P28715 A0A494C0S2 ERCC5-201;BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells 1 ELT(0.017)PAS(0.934)PT(0.045)CT(0.003)NS(0.001)VSK;ELTPAS(0.999)PT(0.001)CTNSVSK;ELTPAS(0.99)PT(0.01)CTNSVSK 308 2.11E-94 101785300 9531.6 8675.2 9043.7 6473.7 7882.5 7096.5 7967 7740.2 6566 6004.9 TRUE FALSE 8720.887368 8110.442903 8429.838841 6972.305496 7568.523334 7498.297697 7435.535967 7672.528247 7248.559197 6748.832347 1.292206847 1.201754983 1.249081087 1.033112861 1.121456712 1.111051114 1.101751471 1.136867513 1.074046416 1 12.7204222 -1.522878745 0.346805342 1.068574729 3.69264682 0.661784107 0.050796073 38.86662731 0.548385892 0.043410107 66.4831529 0.03 1.522878745 2.624072091 ELTPAS(ph)PTCTNSVSK ddPTM_A459_MK2206_30min_R2 3 ELTPASPTCTNSVSK 15 0 A0A494C0S2;A0A090HNM7;A0A1W2PS85;R4GMW8;P28715 A0A494C0S2 ERCC5-201;BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells 1 ELT(0.063)PAS(0.835)PT(0.102)CT(0.001)NSVSK;ELT(0.001)PAS(0.998)PT(0.001)CTNSVSK;ELTPAS(0.961)PT(0.009)CT(0.023)NS(0.006)VSK 227.63 1.02E-13 84839000 87165.7 108288.9 96792.9 116465.3 95141.7 92534.8 119847.9 92993.6 90717.1 97026.7 TRUE FALSE 93839.17301 102911.4307 100019.927 106949.7124 91405.95881 96056.27666 104111.7268 105148.1828 98607.50938 93860.72673 0.999770365 1.096426954 1.065620632 1.139451144 0.973846698 1.023391572 1.109215008 1.120257497 1.050572618 1 16.51823401 -7.262278531 24.99084695 1.080032736 1.053221252 0.017177789 0.054079546 273.0589474 8131602.069 0.02188653 0.015833319 5.47E-08 7.262278531 -0.026811484 ELTPASPT(ph)CTNSVSK ddPTM_A459_MK2206_30min_R2 1 ELTPASPTCTNSVSK 15 0 A0A494C0S2;A0A090HNM7;A0A1W2PS85;R4GMW8;P28715 A0A494C0S2 ERCC5-201;BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells 1 ELT(0.013)PAS(0.108)PT(0.838)CT(0.038)NS(0.003)VS(0.001)K 105.13 0.01124 37271000 43951 57543 54198 56287 47403 53701 58597 47007 44713 47907 TRUE FALSE 47315.92235 54685.4983 56004.93427 51688.17205 45541.72004 55744.62919 50903.14351 53150.9763 48602.05592 46343.79851 1.020976352 1.179996031 1.208466636 1.115320144 0.982692863 1.202849809 1.098380908 1.14688433 1.048728362 1 15.50008868 -8.469040576 3.823947756 1.00053929 1.121573233 0.243112544 0.069496342 0.281718245 8.639318081 0.066875764 0.017589087 3.40E-09 8.469040576 0.121033943 ELVEFAQDDDRLR ddPTM_A459_MK2206_30min_R2 2 ELVEFAQDDDRLR 13 1 Q14677-2;Q14677;Q14677-3 Q14677-2 CLINT1 Clathrin interactor 1 0 ; 139.78 0.002583 9293700 24998 41208 33398 43318 36587 41559 41280 29682 36475 35639 FALSE TRUE 26911.8661 39161.67064 34511.47265 39778.78083 35150.41055 43140.55687 35859.88641 33561.53931 39647.52957 34476.10235 0.780594797 1.135907715 1.001025937 1.153807366 1.019558713 1.251317693 1.040137486 0.973472551 1.150000344 1 15.07330906 -4.755116429 24.99313338 1.081718854 0.780594296 0.52914927 0.084887462 162.552085 642469.2642 0.020150842 0.184010823 1.76E-05 4.755116429 -0.301124558 ELVEPLT(ph)PSGEAPNQALLR ddPTM_A459_MK2206_30min_R1 6 ELVEPLTPSGEAPNQALLR 19 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 ELVEPLT(0.988)PS(0.012)GEAPNQALLR;ELVEPLT(0.963)PS(0.037)GEAPNQALLR;ELVEPLT(0.999)PS(0.001)GEAPNQALLR;ELVEPLT(0.991)PS(0.009)GEAPNQALLR;ELVEPLT(0.894)PS(0.106)GEAPNQALLR;ELVEPLT(1)PSGEAPNQALLR 245.22 3.44E-30 300478200 27678.31 24688.15 17639.94 17054.63 24396.06 20643.99 23665.21 22076.19 24000.31 21062.91 TRUE FALSE 25324.12439 23080.94695 16442.59002 18368.18056 23424.31327 21812.83487 22086.54702 21883.1802 26495.22811 23672.34231 1.069776876 0.975017455 0.694590751 0.775934224 0.989522413 0.921448101 0.93301063 0.924419726 1.119248267 1 14.53091484 -8.151563056 5.56255357 1.05793165 0.903257558 0.246203569 0.104196172 0.324365192 13.52884987 0.079163949 0.02879952 7.05E-09 8.151563056 -0.154674092 ELVEPLT(ph)PSGEAPNQALLR ddPTM_A459_MK2206_30min_R2 6 ELVEPLTPSGEAPNQALLR 19 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 ELVEPLT(0.921)PS(0.079)GEAPNQALLR;ELVEPLT(0.924)PS(0.076)GEAPNQALLR;ELVEPLT(0.927)PS(0.073)GEAPNQALLR;ELVEPLT(0.993)PS(0.007)GEAPNQALLR;ELVEPLT(0.889)PS(0.111)GEAPNQALLR;ELVEPLT(0.909)PS(0.091)GEAPNQALLR 145.48 8.97E-05 113652300 252384 132721.7 166949 139208.6 124907 156352 202216 100998.1 178326 138302 TRUE FALSE 271706.7131 126130.9334 172514.9963 127834.8121 120002.5236 162302.0849 175664.7963 114198.8984 193836.4731 133789.2171 2.03085659 0.942758588 1.289453665 0.955494134 0.896952133 1.213117832 1.312996669 0.853573262 1.448819848 1 17.02960232 -4.755426666 24.99602429 1.101908922 2.030858106 0.675601374 0.193203349 111.5072796 463512.0426 0.045549941 0.404469223 1.76E-05 4.755426666 0.928949184 ELVGPPLAETVFT(ph)PK ddPTM_A459_MK2206_30min_R1 2 ELVGPPLAETVFTPK 15 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 ELVGPPLAETVFT(1)PK;ELVGPPLAETVFT(1)PK 170.47 0.00012245 21843000 12637.8 13555 13192.4 9224.6 8431.5 8816.8 11685 9097.7 14410.3 18913.1 TRUE FALSE 11562.88875 12672.56704 12296.93664 9935.08029 8095.655501 9315.999597 10905.51497 9018.159768 15908.30225 21256.19761 0.543977289 0.596182218 0.578510647 0.467396873 0.380860945 0.438272158 0.513051072 0.424260253 0.748407713 1 14.37559593 -8.514194907 3.335741648 0.998700605 0.494212137 0.858353465 0.065867513 0.081962605 2.30994615 0.07201851 0.019073994 3.06E-09 8.514194907 -0.504488469 ELVGPPLAETVFT(ph)PK ddPTM_A459_MK2206_30min_R2 4 ELVGPPLAETVFTPK 15 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 ELVGPPLAETVFT(1)PK;ELVGPPLAET(0.001)VFT(0.999)PK;ELVGPPLAET(0.003)VFT(0.997)PK;ELVGPPLAET(0.001)VFT(0.999)PK 147.07 0.00077465 21667600 146527 99447 112498 100970 88948 68425.5 110016 74929 62022.1 130780 TRUE FALSE 157745.2198 94508.60659 116248.6272 92720.42801 85455.45459 71029.48035 95570.76705 84722.47757 67416.67015 126512.6593 1.246873006 0.747028852 0.918869525 0.732894467 0.675469594 0.561441683 0.755424537 0.669675889 0.532884776 1 16.94892223 -1.522892986 0.85941641 0.690905416 198.0411185 0.547356518 0.138098991 504.7816281 1.346618729 0.044791726 194890.7966 0.029999016 1.522892986 197.3502131 ELVGPPLAETVFTPKT(ph)S(ph)PENVQDR ddPTM_A459_MK2206_30min_R1 1 ELVGPPLAETVFTPKTSPENVQDR 24 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 2 ELVGPPLAET(0.075)VFT(0.074)PKT(0.909)S(0.943)PENVQDR 92.034 0.00012571 6933600 716.85 1060.7 841.17 692.81 731.13 626.91 719.18 699.6 542.66 536.14 TRUE FALSE 655.8781432 991.6482372 784.073724 746.1703462 702.0075439 662.4051024 671.2048144 693.483471 599.0714489 602.5610709 1.088484097 1.645722376 1.30123528 1.238331486 1.165039658 1.099316127 1.113919977 1.150893253 0.994208683 1 9.234963659 -6.128002156 1.413322756 1.082187396 1.379647459 0.437593839 0.134621211 0.369635831 1.486976432 0.047327623 0.074558333 7.45E-07 6.128002156 0.297460063 ELVLDNS(ph)R ddPTM_A459_MK2206_30min_R1 3 ELVLDNSR 8 0 P39687;H0YN26;H7BZ09 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 1 ELVLDNS(1)R;ELVLDNS(1)R;ELVLDNS(1)R 96.756 0.020821 7529200 5517.8 6133.6 6029.5 5182.5 6749.2 5963.9 7248.6 5144.7 6162.7 5512.6 TRUE FALSE 5048.482135 5734.301525 5620.234339 5581.657048 6480.365072 6301.570864 6765.05912 5099.72043 6803.334718 6195.542506 0.814857154 0.92555277 0.9071416 0.900914979 1.045972175 1.017113652 1.091923607 0.823127341 1.098101532 1 12.5970149 -6.198295661 6.752268995 1.007940774 0.89044181 0.392931479 0.076316649 0.282420387 25.24973532 0.022015588 0.028444437 6.33E-07 6.198295661 -0.117498964 ELVLDNS(ph)R ddPTM_A459_MK2206_30min_R2 4 ELVLDNSR 8 0 P39687;H0YN26;H7BZ09 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 1 ELVLDNS(1)R;ELVLDNS(1)R;ELVLDNS(1)R;ELVLDNS(1)R 107.34 0.013342 12051400 86086 101762 94145 106178 88268 100155 94858 78905 69879 83606 TRUE FALSE 92676.81035 96708.64706 97283.74731 97502.91775 84802.15481 103966.4687 82403.03066 89218.15442 75956.94911 80877.94307 1.145884859 1.195735739 1.202846458 1.205556349 1.048520172 1.2854737 1.018856656 1.103120963 0.939155303 1 16.30345869 -7.686981618 1.385484011 0.982921438 1.177329475 0.54655345 0.070753155 0.325689289 1.167610968 0.052385846 0.021467523 2.06E-08 7.686981618 0.194408037 ELVPLPEYSGITS(ph)LCK ddPTM_A459_MK2206_30min_R2 1 ELVPLPEYSGITSLCK 16 0 Q9P225-2;Q9P225 Q9P225-2 DNAH2 "Dynein heavy chain 2, axonemal" 1 ELVPLPEYS(0.016)GIT(0.016)S(0.967)LCK 92.457 0.020016 0 12792 9310.4 8649.9 12758 8594.3 11144 16770 7924.9 14091 11779 TRUE FALSE 13771.36536 8848.059075 8938.283349 11715.63059 8256.844599 11568.09273 14568.07886 8960.71164 15316.60971 11394.65219 1.208581457 0.776509798 0.784427923 1.028169214 0.724624539 1.015221222 1.278501406 0.78639624 1.344192824 1 13.47606927 -6.992473149 24.93933509 1.09338503 0.894794551 0.189104337 0.192747616 283.6167333 939725.2424 0.064174191 0.056483745 1.02E-07 6.992473149 -0.198590478 EMDMSPEEVVAS(ph)PR ddPTM_A459_MK2206_30min_R1 2 EMDMSPEEVVASPR 14 0 Q13049 Q13049 TRIM32 E3 ubiquitin-protein ligase TRIM32 1 EMDMSPEEVVAS(1)PR;EMDMSPEEVVAS(1)PR 227.47 3.83E-13 32849000 2102.71 2098.59 1782.95 1400.1 1779.23 1719.38 2004.06 1705.48 2055.84 2324.53 TRUE FALSE 1923.863473 1961.97141 1661.928322 1507.935945 1708.359502 1816.72981 1870.372814 1690.569168 2269.551925 2612.510326 0.73640416 0.750990873 0.636142298 0.57719808 0.653914928 0.695396222 0.715929348 0.647105258 0.868724576 1 11.35122102 -8.456186844 3.051340793 0.998569627 0.675447701 0.821399435 0.0497905 0.098749453 1.915051547 0.052942989 0.014161017 3.50E-09 8.456186844 -0.323121926 EMDMSPEEVVAS(ph)PR ddPTM_A459_MK2206_30min_R2 2 EMDMSPEEVVASPR 14 0 Q13049 Q13049 TRIM32 E3 ubiquitin-protein ligase TRIM32 1 EMDMSPEEVVAS(1)PR;EMDMSPEEVVAS(1)PR 180.56 7.39E-05 16281600 23609 23337.6 22687 27137 24510 22981 25081 17891.8 17160.6 21629 TRUE FALSE 25416.52319 22178.68872 23443.37326 24919.82029 23547.61425 23855.55806 21787.83457 20230.31969 18653.19797 20923.2475 1.214750396 1.060002216 1.120446205 1.191011113 1.12542827 1.140146053 1.041321839 0.966882397 0.89150587 1 14.35281917 -7.54296312 2.129693082 0.941821647 1.139750409 0.771968413 0.046343345 0.146994281 1.323223215 0.026813376 0.013711791 2.86E-08 7.54296312 0.197928762 EMDRETLIDVAR ddPTM_A459_MK2206_30min_R1 1 EMDRETLIDVAR 12 1 P40227;P40227-2 P40227 CCT6A T-complex protein 1 subunit zeta 0 101.72 0.034584 9266000 8130.5 4611.7 5661.5 6843.4 6579.3 7537.9 5779.7 5819.4 4534.2 3683.8 FALSE TRUE 7438.95828 4311.477492 5277.213154 7370.479854 6317.232549 7964.689384 5394.146759 5768.521599 5005.546316 4140.176955 1.796773027 1.041375173 1.274634686 1.780233051 1.525836363 1.923755789 1.302878311 1.393303151 1.209017482 1 12.01547672 -8.310437658 1.333677433 1.011408364 1.520660823 0.321004529 0.252139552 0.541034027 1.938895803 0.246587586 0.076910232 4.89E-09 8.310437658 0.509252459 EMDRETLIDVAR ddPTM_A459_MK2206_30min_R2 2 EMDRETLIDVAR 12 1 P40227;P40227-2 P40227 CCT6A T-complex protein 1 subunit zeta 0 ; 149.49 0.0016193 10598100 28276 46528 38284 45608 51511 54172 45595 32261 49745 38931 FALSE TRUE 30440.8323 44217.48718 39560.36945 41881.68051 49488.41932 56233.55342 39608.32173 36477.62347 54071.73018 37660.68466 0.808292058 1.174102053 1.050442121 1.112079637 1.314060532 1.493163333 1.051715392 0.968586307 1.435760679 1 15.20077161 -4.220004279 1.210856311 1.195476588 3.43E-28 0.281863701 0.173518074 7.066045649 3.435231502 0.052878832 14.7891791 6.03E-05 4.220004279 -1.195476588 EMDT(ph)ARTPLSEAEFEEIMNR ddPTM_A459_MK2206_30min_R2 1 EMDTARTPLSEAEFEEIMNR 20 1 F8WJN3;Q16630-3;Q16630;Q16630-2 F8WJN3 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 1 EMDT(0.831)ART(0.169)PLSEAEFEEIMNR 89.669 0.0024941 5766400 3119.5 4189.8 4766.6 5797.2 4234.1 3453.5 4715.5 4271.1 3628.1 4869.2 TRUE FALSE 3358.331318 3981.740625 4925.516065 5323.550216 4067.847959 3584.925362 4096.349186 4829.347435 3943.66558 4710.318403 0.712973313 0.84532303 1.045686436 1.130189036 0.863603606 0.7610792 0.869654413 1.025269848 0.837239703 1 12.20160887 -12.29716939 1.993998114 4.279867782 0.906290043 0.053544639 0.124026245 6622027.586 244289.0398 98794618.17 0.033430307 5.04E-13 12.29716939 -3.37357774 EMDTART(ph)PLSEAEFEEIMNR ddPTM_A459_MK2206_30min_R1 1 EMDTARTPLSEAEFEEIMNR 20 1 F8WJN3;Q16630-3;Q16630;Q16630-2 F8WJN3 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 1 EMDT(0.243)ART(0.757)PLSEAEFEEIMNR 127.91 0.00027189 12993000 1116.7 1076.5 1152.1 1258.9 1321.7 1241.4 1674.9 1273.2 1098 848.85 TRUE FALSE 1021.718801 1006.419654 1073.898662 1355.860696 1269.05389 1311.686995 1563.170477 1262.068547 1212.141029 954.0119465 1.070970657 1.054934016 1.125665843 1.42121983 1.33022851 1.37491674 1.638522959 1.322906439 1.27057217 1 9.897863522 -5.669061465 4.923833612 1.363954462 1.070209396 0.369064594 0.149638865 0.194654485 7.903083417 0.040270801 0.070871387 2.14E-06 5.669061465 -0.293745066 EMEAELEDER ddPTM_A459_MK2206_30min_R1 1 EMEAELEDER 10 0 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 157.34 0.0068372 10879000 2356.2 2366.8 2604 2198.4 2453.4 2082.2 2098.9 2062 2231.4 1887 FALSE TRUE 2155.792817 2212.72089 2427.247735 2367.721149 2355.675883 2200.092365 1958.886211 2043.972151 2463.362015 2120.775806 1.016511416 1.043354457 1.144509348 1.116441041 1.11076139 1.037399785 0.923664918 0.963785114 1.161538154 1 11.0503764 -6.955353169 6.205848224 1.005287944 1.0880002 0.215116854 0.066689783 0.283691027 26.74183786 0.024743244 0.021612151 1.11E-07 6.955353169 0.082712256 EMEAELEDER ddPTM_A459_MK2206_30min_R2 2 EMEAELEDER 10 0 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 ; 162.64 0.0056161 44267000 70361 95668 86781 103231 92021 95965 103878 69925 83110 85688 FALSE TRUE 75747.89226 90917.26623 89674.23523 94796.69708 88407.79317 99617.01532 90238.69382 79064.43759 90338.75757 82892.00758 0.913814184 1.096815832 1.081820043 1.143616856 1.066541827 1.201768641 1.088629609 0.95382462 1.089836767 1 16.33894538 -7.655578269 11.32162037 1.016446035 1.091315324 0.150153165 0.07533634 0.692052268 68.8146044 0.035284404 0.020353825 2.21E-08 7.655578269 0.074869289 EMEAELEDERK ddPTM_A459_MK2206_30min_R1 3 EMEAELEDERK 11 1 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 ;; 110.39 0.011975 16973900 4679.3 4837.7 5038.5 4422.4 4513.82 4170.52 4605.7 4236.4 4386.8 4230.2 FALSE TRUE 4281.300963 4522.764851 4696.500658 4763.014014 4334.024991 4406.651238 4298.462157 4199.361601 4842.823558 4754.269112 0.900517169 0.951306025 0.987849141 1.001839379 0.911606998 0.926883004 0.904126808 0.883282267 1.018626301 1 12.21500785 -6.28942971 24.64534794 0.932393414 0.961692189 0.022302405 0.046718677 1672.968508 1473036.146 0.014519381 0.016467489 5.14E-07 6.28942971 0.029298775 EMEAELEDERK ddPTM_A459_MK2206_30min_R2 1 EMEAELEDERK 11 1 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 86.344 0.045455 5792500 18325 20163 20120 19235 18925 12156 21583 15938 15421 17962 FALSE TRUE 19727.97609 19161.73474 20790.79076 17663.43897 18181.90941 12618.6051 18749.12617 18021.15132 16762.29071 17375.90141 1.135364182 1.102776442 1.196530198 1.016548066 1.046386543 0.726212977 1.079030419 1.037134759 0.964686108 1 14.0848002 -5.983314814 2.784070935 0.970953393 1.14002991 0.386208742 0.094171976 0.289839748 4.564153617 0.029209996 0.044208898 1.04E-06 5.983314814 0.169076517 EMEDKVT(ph)SPEKAEEAK ddPTM_A459_MK2206_30min_R1 1 EMEDKVTSPEKAEEAK 16 2 P56211 P56211 ARPP19 cAMP-regulated phosphoprotein 19 1 EMEDKVT(0.834)S(0.166)PEKAEEAK 125.73 0.0038365 20286000 1323.4 1859.5 1605.6 1570.3 617.14 618.61 875.36 940.63 2103.6 2445.4 TRUE FALSE 1210.837881 1738.446212 1496.616345 1691.244778 592.558007 653.6351636 816.9663316 932.4061711 2322.276748 2748.354614 0.440568286 0.632540722 0.544549942 0.615366288 0.21560464 0.237827812 0.297256521 0.339259776 0.844969836 1 11.42435245 -8.384095879 3.99064259 0.989837147 0.41749776 0.678489334 0.141088009 0.146440244 3.746013297 0.155195328 0.040983566 4.13E-09 8.384095879 -0.572339387 EMEENFAVEAANYQDTIGR ddPTM_A459_MK2206_30min_R1 2 EMEENFAVEAANYQDTIGR 19 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 ; 195.23 3.73E-14 15028200 2496.4 2325.63 2788 2754.7 3069.1 2558.8 2301.5 2510.8 1743.09 1920.11 FALSE TRUE 2284.068071 2174.231064 2598.758328 2966.867471 2946.851248 2703.677045 2147.971134 2488.84834 1924.290443 2157.987723 1.058424961 1.007527078 1.204250747 1.374830561 1.36555515 1.252869521 0.995358366 1.153319045 0.891705927 1 11.07547094 -7.263206428 24.97875435 1.022872415 1.215569893 0.384922418 0.123635114 203.8482823 2881532.535 0.056353905 0.040215119 5.45E-08 7.263206428 0.192697478 EMEENFAVEAANYQDTIGR ddPTM_A459_MK2206_30min_R2 2 EMEENFAVEAANYQDTIGR 19 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 ; 179.14 8.42E-12 8842800 15031.7 17646.1 14409.6 15221.9 15191.8 15961.8 15292.2 16547.2 13306.5 14698 FALSE TRUE 16182.53851 16769.82033 14890.00887 13978.22208 14595.2936 16569.23748 13284.31577 18709.97586 14463.87532 14218.40546 1.138140177 1.179444515 1.047234791 0.983107572 1.026507061 1.165337247 0.934304188 1.315898319 1.017264232 1 13.79547206 -5.261530828 24.99953131 1.06764695 1.158792349 0.123098807 0.103041757 17.13838551 4686970.84 0.026027703 0.060477949 5.48E-06 5.261530828 0.091145399 EMEHNTVCAAGT(ph)SPVGEIGEEK ddPTM_A459_MK2206_30min_R1 5 EMEHNTVCAAGTSPVGEIGEEK 22 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 EMEHNTVCAAGT(0.5)S(0.5)PVGEIGEEK;EMEHNTVCAAGT(0.999)S(0.001)PVGEIGEEK;EMEHNTVCAAGT(0.535)S(0.465)PVGEIGEEK;EMEHNTVCAAGT(0.992)S(0.008)PVGEIGEEK;EMEHNTVCAAGT(0.993)S(0.007)PVGEIGEEK 231.23 1.86E-30 411650000 31854.6 18111.2 24773.3 18272.2 34580.3 31641.5 32563.4 28725.5 18303 18438.1 TRUE FALSE 29145.19899 16932.15759 23091.75742 19679.52801 33202.89343 33433.01439 30391.155 28474.35598 20205.66235 20722.35103 1.406461987 0.81709636 1.114340616 0.949676414 1.602274442 1.613379406 1.466588176 1.374089067 0.975066117 1 14.33890007 -6.248033527 24.96978181 1.37741242 1.056725929 0.207690296 0.247597687 1057.08476 1968928.489 0.073249614 0.09403165 5.65E-07 6.248033527 -0.320686491 EMEHNTVCAAGT(ph)SPVGEIGEEK ddPTM_A459_MK2206_30min_R2 8 EMEHNTVCAAGTSPVGEIGEEK 22 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 EMEHNTVCAAGT(0.5)S(0.5)PVGEIGEEK;EMEHNTVCAAGT(0.5)S(0.5)PVGEIGEEK;EMEHNTVCAAGT(0.5)S(0.5)PVGEIGEEK;EMEHNTVCAAGT(0.981)S(0.019)PVGEIGEEK;EMEHNTVCAAGT(0.844)S(0.156)PVGEIGEEK;EMEHNTVCAAGT(0.998)S(0.002)PVGEIGEEK;EMEHNTVCAAGT(0.998)S(0.002)PVGEIGEEK;EMEHNTVCAAGT(0.852)S(0.148)PVGEIGEEK 180.82 3.47E-16 514689800 452131.8 683221 618982 817173 851753 733443 916726 613323 707796 659956 TRUE FALSE 486747.3582 649293.2386 639618.5509 750407.3519 818308.8975 761354.6873 796358.775 693486.422 769358.8167 638421.6898 0.762422966 1.01702879 1.001874719 1.175410178 1.281768634 1.192557677 1.247386779 1.086251349 1.205095048 1 19.28415014 -4.691801904 0.992351437 1.179892369 0.512215143 0.673655562 0.084853648 1.277646788 0.895941486 0.027682979 0.953488096 2.03E-05 4.691801904 -0.667677226 EMEHNTVCAAGTS(ph)PVGEIGEEK ddPTM_A459_MK2206_30min_R1 3 EMEHNTVCAAGTSPVGEIGEEK 22 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 EMEHNTVCAAGT(0.26)S(0.74)PVGEIGEEK;EMEHNTVCAAGT(0.226)S(0.774)PVGEIGEEK;EMEHNTVCAAGT(0.205)S(0.795)PVGEIGEEK 98.073 0.00032326 46785000 12959.2 9588 11737.3 8142.32 14316 13338.6 14273.3 13444.1 8914.3 8740.45 TRUE FALSE 11856.95199 8963.819457 10940.60478 8769.442897 13745.76341 14093.82001 13321.1542 13326.55965 9840.973385 9823.282933 1.207025398 0.912507511 1.113742203 0.892720179 1.399304438 1.434736238 1.356079662 1.356629931 1.00180087 1 13.26198954 -6.264983626 24.99351813 1.289654963 1.02887397 0.295290338 0.167257 339.4931046 2394054.672 0.050072263 0.059066647 5.43E-07 6.264983626 -0.260780993 EMEHNTVCAAGTS(ph)PVGEIGEEK ddPTM_A459_MK2206_30min_R2 3 EMEHNTVCAAGTSPVGEIGEEK 22 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 EMEHNTVCAAGT(0.096)S(0.904)PVGEIGEEK;EMEHNTVCAAGT(0.065)S(0.935)PVGEIGEEK;EMEHNTVCAAGT(0.073)S(0.927)PVGEIGEEK 124.86 5.98E-05 100074000 268687 428852 329928 465757 495634 434758 552949 347900 372600 369503 TRUE FALSE 289257.8833 407555.8333 340927.6349 427703.1632 476172.9188 451303.0203 480346.1321 393371.7245 405008.0745 357446.1474 0.809234861 1.140188071 0.953787409 1.196552729 1.332152892 1.262576261 1.343827974 1.100506265 1.133060399 1 18.44736638 -4.075937162 0.817071679 1.20552256 5.27E-14 0.43433145 0.121353052 6.444867136 1.44806772 0.044753503 9.234831566 8.40E-05 4.075937162 -1.20552256 EMFEDTVEER ddPTM_A459_MK2206_30min_R2 1 EMFEDTVEER 10 0 E9PC52;Q16576 E9PC52 RBBP7 Histone-binding protein RBBP7 0 139.38 0.021242 4183000 16826 19694 16616 18590 18956 21752 19881 17541 16109 17511 FALSE TRUE 18114.2115 18716.0246 17169.96915 17071.13753 18211.69219 22579.7876 17270.60082 19833.66893 17510.1317 16939.6175 1.069340054 1.104867013 1.013598397 1.00776405 1.075094652 1.332957347 1.019539008 1.170845146 1.033679285 1 14.04811368 -6.534683591 24.9996092 1.126083222 1.049251998 0.080965979 0.093314875 468.0296882 991159.572 0.029911864 0.02993323 2.92E-07 6.534683591 -0.076831223 EMFPYEAS(ph)TPTGISASCR ddPTM_A459_MK2206_30min_R1 1 EMFPYEASTPTGISASCR 18 0 G5E972;P42167;H0YJH7;P42167-2 G5E972 TMPO "Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 EMFPYEAS(0.598)T(0.377)PT(0.019)GIS(0.005)AS(0.001)CR 129.88 0.0011887 5119500 2410.4 2226.3 1452 1421.9 2557.3 2160.3 2062.4 1640.2 1717.2 1568.4 TRUE FALSE 2205.382822 2081.367465 1353.442286 1531.414984 2455.437326 2282.614319 1924.821059 1625.859904 1895.709085 1762.705233 1.251135347 1.180780216 0.767821108 0.868786769 1.392993724 1.294949534 1.091969901 0.9223663 1.075454392 1 10.78357553 -7.577792844 9.804301701 1.000372615 1.119408413 0.0895156 0.180258503 1.236275697 210.4255855 0.094874289 0.054708999 2.64E-08 7.577792844 0.119035798 EMFPYEAS(ph)TPTGISASCR ddPTM_A459_MK2206_30min_R2 1 EMFPYEASTPTGISASCR 18 0 G5E972;P42167;H0YJH7;P42167-2 G5E972 TMPO "Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 EMFPYEAS(0.671)T(0.324)PT(0.005)GISASCR 160.64 1.24E-05 3426900 27567 9673 9891.1 21396 11431 18950 22439 9772.3 12670 13376 TRUE FALSE 29677.55072 9192.652886 10220.86434 19647.87836 10982.1615 19671.15553 19492.73235 11049.57316 13772.0137 12939.54222 2.29355492 0.710431075 0.789893813 1.518436899 0.848728751 1.520235817 1.50644683 0.853938492 1.064335466 1 13.65949896 -4.749291072 24.99563152 1.108594454 2.293557626 0.59040262 0.300323508 421.8388366 867897.2086 0.076692285 1.273688599 1.78E-05 4.749291072 1.184963173 EMFPYEAST(ph)PTGISASCR ddPTM_A459_MK2206_30min_R1 1 EMFPYEASTPTGISASCR 18 0 G5E972;P42167;H0YJH7;P42167-2 G5E972 TMPO "Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 EMFPYEAS(0.305)T(0.644)PT(0.05)GISASCR 188.16 4.79E-10 3531200 1340 1233.6 578.99 797.64 1296.3 1223.6 1229.4 909.21 1127.9 837.26 TRUE FALSE 1226.025963 1153.292416 539.689772 859.074371 1244.665626 1292.879175 1147.388969 901.2608728 1245.149241 940.9860898 1.302916139 1.22562111 0.573536397 0.912951191 1.322724788 1.373962047 1.219347429 0.957783417 1.323238733 1 9.878029586 -6.254985177 24.7449776 1.207113107 0.988873715 0.155478574 0.222000433 871.2930456 3340475.443 0.070610947 0.088955392 5.56E-07 6.254985177 -0.218239392 EMFPYEAST(ph)PTGISASCR ddPTM_A459_MK2206_30min_R2 1 EMFPYEASTPTGISASCR 18 0 G5E972;P42167;H0YJH7;P42167-2 G5E972 TMPO "Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 EMFPYEAS(0.319)T(0.679)PT(0.002)GISASCR 184.21 1.12E-09 3370300 47003 23250 22605 33240 20096 28465 45770 21897 25500 25311 TRUE FALSE 50601.58582 22095.43881 23358.63942 30524.18567 19306.93007 29548.25552 39760.34402 24759.01308 27717.94391 24485.10414 2.066627347 0.902403301 0.953993876 1.246643081 0.788517376 1.206784964 1.623858481 1.011186758 1.132032919 1 14.57961671 -4.753911723 24.99998344 1.107101452 2.066629049 0.63596498 0.220131274 184.0953085 611345.5532 0.056785305 0.582675045 1.76E-05 4.753911723 0.959527597 EMGS(ph)LSIKDPK ddPTM_A459_MK2206_30min_R1 2 EMGSLSIKDPK 11 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 EMGS(0.999)LS(0.001)IKDPK;EMGS(0.988)LS(0.012)IKDPK 122.46 0.019679 14975500 5155 5862.5 6362.4 5813.8 5994 3933.1 4860.4 5500.8 4453.1 3431.6 TRUE FALSE 4716.54018 5480.850184 5930.538015 6261.579883 5755.246287 4155.788723 4536.171584 5452.707086 4916.015681 3856.732515 1.222936815 1.421112344 1.537710482 1.623545283 1.492259643 1.07754134 1.176169612 1.413815209 1.274658188 1 11.91316338 -6.744720154 24.87350829 1.213533616 1.470836839 0.47168761 0.141955417 230.2736561 342581.7657 0.049589458 0.049457685 1.80E-07 6.744720154 0.257303222 EMLAS(ph)DDEEDVSSK ddPTM_A459_MK2206_30min_R1 1 EMLASDDEEDVSSK 14 0 E7EUA0;Q0ZGT2-2;Q0ZGT2;E7ETM8;Q0ZGT2-4;Q0ZGT2-3 E7EUA0 NEXN Nexilin 1 EMLAS(1)DDEEDVSSK 281.68 1.08E-54 15004000 2692.7 2930 2367.6 2369.2 2088.7 2134.9 2422.2 2333.9 2687.7 3046.3 TRUE FALSE 2463.671725 2739.256467 2206.893909 2551.676195 2005.502656 2255.776193 2260.619458 2313.494958 2967.096033 3423.698642 0.719593627 0.80008691 0.644593505 0.74529813 0.585770789 0.65887113 0.660285759 0.67572973 0.866634696 1 11.74134 -8.458886541 2.832915035 0.998179408 0.685114357 0.770629727 0.056151142 0.114699533 1.959701388 0.056222738 0.015141415 3.48E-09 8.458886541 -0.313065051 EMLAS(ph)DDEEDVSSK ddPTM_A459_MK2206_30min_R2 4 EMLASDDEEDVSSK 14 0 E7EUA0;Q0ZGT2-2;Q0ZGT2;E7ETM8;Q0ZGT2-4;Q0ZGT2-3 E7EUA0 NEXN Nexilin 1 EMLAS(1)DDEEDVSSK;EMLAS(1)DDEEDVSSK;EMLAS(1)DDEEDVSSK;EMLAS(1)DDEEDVSSK 197.14 1.00E-14 19442200 136253 123983 124108 121072 127675 91697 141528 113047 97446 137396 TRUE FALSE 146684.6344 117826.1845 128245.6988 111180.0303 122661.838 95186.59359 122945.2036 127822.631 105921.6769 132912.7798 1.10361573 0.886492516 0.964886138 0.836488639 0.922874672 0.716158324 0.925006638 0.96170309 0.796926203 1 17.0201203 EMLIT(ph)CAICISLSR ddPTM_A459_MK2206_30min_R2 1 EMLITCAICISLSR 14 0 F5H0J3 F5H0J3 NDUFA9 1 EMLIT(1)CAICISLSR 99.161 0.023122 38632000 115700 76699 98016 88007 87987 63598 106790 87574 67280 117250 TRUE FALSE 124558.081 72890.23919 101283.8045 80816.54658 84532.18828 66018.26646 92768.34472 99020.22249 73131.89279 113424.1421 1.098161984 0.642634256 0.892965136 0.712516269 0.745275095 0.582047748 0.817888882 0.873008344 0.644764787 1 16.79136822 -2.105493551 14.609353 0.785947846 0.88628045 0 0.158884113 0 0 0.033926793 0 0.007843438 2.105493551 0.100332604 EMLMEDVGS(ph)EEEQEEEDEAPFQEK ddPTM_A459_MK2206_30min_R1 2 EMLMEDVGSEEEQEEEDEAPFQEK 24 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EMLMEDVGS(1)EEEQEEEDEAPFQEK;EMLMEDVGS(1)EEEQEEEDEAPFQEK 173.74 1.28E-16 8579700 7457 7443.2 7802.1 4623.4 6491.2 6891.4 8943.3 6844.2 8831.9 13751.5 TRUE FALSE 6822.742992 6958.646327 7272.51519 4979.495069 6232.641759 7281.585113 8346.708775 6784.361881 9750.00761 15455.13964 0.441454633 0.45024804 0.470556421 0.322190235 0.40327308 0.471143275 0.540060392 0.438971244 0.630858591 1 13.91579907 -9.025099356 0.7173536 1.009901349 0.423649549 0.913873212 0.052348686 0.463290264 0.395315611 0.061478483 0.020074449 9.44E-10 9.025099356 -0.586251801 down EMLWGSSTQLASDGS(ph)PK ddPTM_A459_MK2206_30min_R1 1 EMLWGSSTQLASDGSPK 17 0 A0A0J9YW64;A6NIW2;Q5JSL3 A0A0J9YW64 DOCK11 Dedicator of cytokinesis protein 11 1 EMLWGSSTQLAS(0.286)DGS(0.714)PK 117.3 0.0015887 3772600 1474.3 1519.8 1556.7 1741.2 1502.4 1418.8 1757.4 1372.9 1788.2 1677.2 TRUE FALSE 1348.903043 1420.860744 1451.035541 1875.307526 1442.556227 1499.13123 1640.167053 1360.89688 1974.089789 1884.984198 0.71560443 0.753778597 0.769786581 0.994866444 0.765288233 0.795301749 0.870122441 0.721967262 1.047271267 1 10.88033671 -14.52287855 0.028547001 2.214790439 2.23E-08 0.36302359 0.095335219 1914.0544 4.102152959 243.3188779 102.7032265 3.00E-15 14.52287855 -2.214790417 EMPQDLRS(ph)PAR ddPTM_A459_MK2206_30min_R1 1 EMPQDLRSPAR 11 1 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 EMPQDLRS(1)PAR 84.734 0.019724 40605000 4304.5 3754.1 4433.8 3950.2 4842.7 3705.7 3888.9 4375.1 3492.6 2584.4 TRUE FALSE 3938.379671 3509.707408 4132.846009 4254.445088 4649.805004 3915.513532 3629.478577 4336.848962 3855.668268 2904.574983 1.355922878 1.208337684 1.422874614 1.464739286 1.600855558 1.348050422 1.249573035 1.493109659 1.327446628 1 11.50411136 -8.556799624 20.78102859 0.999999997 1.392043021 0.539854144 0.108322591 1097.038426 672081.2419 0.111482578 0.028784678 2.77E-09 8.556799624 0.392043023 EMPQDLRS(ph)PART(ph)PPSEEDSAEAER ddPTM_A459_MK2206_30min_R2 1 EMPQDLRSPARTPPSEEDSAEAER 24 2 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 2 EMPQDLRS(1)PART(1)PPSEEDSAEAER 92.8 2.88E-05 15154000 16948 23513 19077 18451 21789 27253 18447 10653 21663 21894 TRUE FALSE 18245.55191 22345.37861 19713.01766 16943.49428 20933.45438 28290.13201 16024.88674 12045.38368 23547.20858 21179.60057 0.861468178 1.055042494 0.93075493 0.799991209 0.988378147 1.335725474 0.756618931 0.568725724 1.111787189 1 14.37038776 EMPSVFQNVLGSAVLS(ph)PAHK ddPTM_A459_MK2206_30min_R1 1 EMPSVFQNVLGSAVLSPAHK 20 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 EMPSVFQNVLGSAVLS(1)PAHK 151.16 7.97E-06 11335000 2753.2 2547.9 2781 1945.7 1977.6 2173 2694.3 2016.5 2319.2 2835.7 TRUE FALSE 2519.025882 2382.031247 2592.233468 2095.558151 1898.828004 2296.033382 2514.568163 1998.869953 2560.289139 3187.007924 0.79040465 0.747419305 0.813375282 0.657531516 0.595802724 0.720435417 0.789005934 0.62719328 0.803351984 1 11.63798689 -8.540834953 20.19884258 1.000000003 0.71805058 0.609587334 0.068619914 164.9070593 185504.1181 0.069311893 0.017896254 2.88E-09 8.540834953 -0.281949423 EMQPTHPIR ddPTM_A459_MK2206_30min_R1 3 EMQPTHPIR 9 0 E7EX29;P63104;B0AZS6;B7Z2E6;H0YB80;P27348;P31946-2;P31946;P63104-2 E7EX29;P27348;P31946-2;P63104-2 YWHAZ;YWHAQ;YWHAB "14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed" 0 ;; 157.66 0.0012098 50202900 18258 19202.2 21496.1 16893.3 20278.6 21503.7 22317.7 21797.4 18331.4 18089.3 FALSE TRUE 16705.06122 17952.13329 20037.00462 18194.42489 19470.86042 22721.22091 20828.92695 21606.82763 20237.01463 20330.33905 0.821681389 0.883021835 0.985571592 0.89493957 0.957724334 1.117601672 1.024524328 1.062787373 0.995409598 1 14.31134665 -6.551609828 6.099439415 1.043136098 0.904330047 0.652529591 0.049430173 0.112746068 12.96612295 0.016612864 0.016883609 2.81E-07 6.551609828 -0.13880605 EMS(ph)PSPPAAQDPGGTALVSAR ddPTM_A459_MK2206_30min_R2 1 EMSPSPPAAQDPGGTALVSAR 21 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 EMS(0.964)PS(0.036)PPAAQDPGGTALVSAR 206.45 1.38E-17 3087200 6773.3 7725.5 7349.6 9085.9 6599 7103.6 8335.4 6770.1 5990.5 7130 TRUE FALSE 7291.869056 7341.862904 7594.631996 8343.552906 6339.890103 7373.932476 7240.951967 7654.975315 6511.542862 6897.348684 1.057198844 1.064447114 1.101094398 1.209675382 0.919177845 1.069096665 1.049816719 1.109843168 0.94406462 1 12.75182619 -6.261058217 24.99999987 1.025237684 1.104484903 0.317233373 0.065632356 51.70395523 3391114.136 0.020032684 0.024222969 5.48E-07 6.261058217 0.07924722 EMTDATNEEETEIKEDT(ph)KVPSPK ddPTM_A459_MK2206_30min_R1 1 EMTDATNEEETEIKEDTKVPSPK 23 2 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 EMTDAT(0.001)NEEET(0.013)EIKEDT(0.837)KVPS(0.148)PK 54.668 0.026622 15573000 3265 5351.2 5353.3 4736.5 2111.3 1903 2527.2 2757.3 4594.1 3965.8 TRUE FALSE 2987.294605 5002.835907 4989.932911 5101.306051 2027.20245 2010.746215 2358.615099 2733.193217 5071.673135 4457.113244 0.670230807 1.12243859 1.119543668 1.144531398 0.454824084 0.451131956 0.52917998 0.613220501 1.137882943 1 12.1218939 -6.253076931 24.9681448 0.65761254 1.029443982 0.273916583 0.246811069 736.5488838 2199146.456 0.074741367 0.094867494 5.58E-07 6.253076931 0.371831442 ENAAAES(ph)GSESSSQEATPEK ddPTM_A459_MK2206_30min_R2 1 ENAAAESGSESSSQEATPEK 20 0 Q9H6Z4;Q9H6Z4-3;Q9H6Z4-2;B7Z7F3;K7ESQ0 Q9H6Z4 RANBP3 Ran-binding protein 3 1 ENAAAES(0.996)GS(0.004)ESSSQEATPEK 221.51 1.20E-19 6132700 34599 31418 33179 37365 31496 25869 35164 34703 20968 37544 TRUE FALSE 37247.92604 29857.82781 34285.1713 34312.15998 30259.30879 26853.46292 30546.92456 39238.80125 22791.75874 36318.94235 1.02557849 0.822100697 0.94400247 0.944745572 0.83315501 0.73937899 0.841074177 1.080394932 0.627544671 1 15.14843457 -4.749828417 24.68113361 0.871248149 1.025578894 0.124522787 0.123520191 972.8252062 2067756.433 0.029314802 0.452796403 1.78E-05 4.749828417 0.154330744 ENAEVDGDDDAEEMEAK ddPTM_A459_MK2206_30min_R2 2 ENAEVDGDDDAEEMEAK 17 0 P05198 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 0 ; 277.94 2.00E-62 37219000 137153 161933 140854 137681 145410 104252 153775 123940 117230 147802 FALSE TRUE 147653.5391 153891.6427 145550.0021 126432.0219 139700.4728 108219.3829 133584.1578 140139.3835 127426.4535 142979.2328 1.032692204 1.076321642 1.017980018 0.884268431 0.977068278 0.756888821 0.934290632 0.98013803 0.891223508 1 17.12544609 -5.639050059 4.581809119 0.913546074 1.052950462 0.43310483 0.065902467 0.188106555 6.635057012 0.018092741 0.032269094 2.30E-06 5.639050059 0.139404388 ENALSSGTLQEEQRT(ph)PPPGQDTQQFHEK ddPTM_A459_MK2206_30min_R1 2 ENALSSGTLQEEQRTPPPGQDTQQFHEK 28 1 Q12802-4;Q12802;Q12802-2;H0YMW2 Q12802-4 AKAP13 A-kinase anchor protein 13 1 ENALS(0.002)S(0.006)GT(0.006)LQEEQRT(0.985)PPPGQDTQQFHEK;ENALSS(0.001)GT(0.001)LQEEQRT(0.998)PPPGQDTQQFHEK 94.957 8.27E-07 29101000 2410.06 2164.62 2615.76 2212.28 2473.45 2366.4 2495.7 2872.61 2337.03 1799.05 TRUE FALSE 2205.071741 2023.702845 2438.209499 2382.670189 2374.927249 2500.383523 2329.216407 2847.495074 2579.972632 2021.929896 1.090577742 1.000876859 1.205882313 1.178413848 1.174584368 1.236632154 1.151976837 1.40830554 1.275995096 1 10.98151726 -5.274886803 21.59611098 1.215903036 1.045727344 0.282245021 0.099496919 130.2068644 209110.2869 0.025820533 0.054473842 5.31E-06 5.274886803 -0.170175692 ENALSSGTLQEEQRT(ph)PPPGQDTQQFHEK ddPTM_A459_MK2206_30min_R2 2 ENALSSGTLQEEQRTPPPGQDTQQFHEK 28 1 Q12802-4;Q12802;Q12802-2;H0YMW2 Q12802-4 AKAP13 A-kinase anchor protein 13 1 ENALS(0.007)S(0.019)GT(0.019)LQEEQRT(0.955)PPPGQDTQQFHEK;ENALS(0.02)S(0.076)GT(0.076)LQEEQRT(0.827)PPPGQDTQQFHEK 80.172 3.78E-05 47667000 58666 77255 68448 73145 87028 64284 84047 64205 66047 73863 TRUE FALSE 63157.51407 73418.62904 70730.02216 67168.81952 83610.84344 66730.37267 73011.52794 72596.81395 71791.64867 71452.85636 0.883904679 1.027511464 0.989883761 0.940043869 1.170153969 0.933907699 1.021813986 1.016009963 1.00474148 1 16.12470406 -4.757209238 24.98667001 1.012000373 0.88390449 0.282062678 0.061096309 162.8474514 961783.169 0.014512191 0.109786218 1.75E-05 4.757209238 -0.128095884 ENAS(ph)PAPGTTAEEAMSR ddPTM_A459_MK2206_30min_R1 1 ENASPAPGTTAEEAMSR 17 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 ENAS(0.997)PAPGT(0.002)T(0.001)AEEAMSR 168.62 1.14E-06 41684000 4251.6 4594.5 3973.3 3067.6 3519.8 4014.7 4963.5 3761.8 4437.6 5693.6 TRUE FALSE 3889.979094 4295.397215 3703.603466 3303.867084 3379.598913 4242.008845 4632.393971 3728.910979 4898.9044 6398.966152 0.607907434 0.67126425 0.578781537 0.516312636 0.528147646 0.662920969 0.7239285 0.582736475 0.765577483 1 12.64362312 -8.991042703 0.628620601 1.010772367 0.590937996 0.79398532 0.061591585 0.771632545 0.539030755 0.081586866 0.027220737 1.02E-09 8.991042703 -0.41983437 ENAS(ph)PAPGTTAEEAMSR ddPTM_A459_MK2206_30min_R2 6 ENASPAPGTTAEEAMSR 17 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 ENAS(0.997)PAPGTT(0.003)AEEAMSR;ENAS(0.992)PAPGTT(0.008)AEEAMSR;ENAS(0.934)PAPGTT(0.066)AEEAMSR;ENAS(1)PAPGTTAEEAMSR;ENAS(0.964)PAPGT(0.007)T(0.024)AEEAMS(0.005)R;ENAS(1)PAPGTTAEEAMSR 275.31 2.83E-52 337535800 343777 339995 327593 383277 310386 314249 385518 285094 277728 373440 TRUE FALSE 370096.8314 323111.3427 338514.7871 351962.0431 298198.6861 326207.9659 334899.0235 322356.7647 301884.2794 361254.6834 1.024476217 0.894414267 0.937053006 0.974276762 0.825452789 0.902986123 0.927044102 0.892325496 0.835654992 1 18.46265677 -2.935516273 1.757696648 0.905935237 74.22083362 0.290413191 0.052163153 1061.243288 6.803296312 0.013942138 312630.2046 0.001160069 2.935516273 73.31489838 ENASPAPGTT(ph)AEEAMSR ddPTM_A459_MK2206_30min_R2 1 ENASPAPGTTAEEAMSR 17 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 ENAS(0.017)PAPGT(0.042)T(0.94)AEEAMS(0.002)R 108.34 0.02395 5915500 24734 21801 23350 25628 23190 25151 27258 21765 26441 25099 TRUE FALSE 26627.65406 20718.39404 24128.47735 23534.11042 22279.44408 26108.13893 23678.99186 24609.76023 28740.79039 24280.02169 1.09668988 0.85331036 0.993758476 0.969278806 0.917603961 1.075293065 0.975245911 1.013580653 1.183721776 1 14.56748209 -8.028113335 13.52248871 1.094147806 0.980053891 0.235036895 0.077364537 3.437831086 1648.819733 0.047869329 0.018574809 9.37E-09 8.028113335 -0.114093915 ENDFAQS(ph)GQDAVPES(ph)PSKLS(ph)SK ddPTM_A459_MK2206_30min_R2 1 ENDFAQSGQDAVPESPSKLSSK 22 1 O60285;F8VZ96 O60285 NUAK1 NUAK family SNF1-like kinase 1 3 ENDFAQS(1)GQDAVPES(0.933)PS(0.201)KLS(0.46)S(0.406)K 60.829 0.047751 2884600 7999.6 7968.7 7746.4 8881 7148.9 10986 9663.1 8095.1 7794.3 11004 TRUE FALSE 8612.055527 7572.985946 8004.66111 8155.393891 6868.198266 11404.07993 8394.323363 9153.157365 8472.234125 10644.94038 0.809028066 0.711416473 0.751968618 0.766128658 0.645207772 1.071314589 0.788574014 0.859859899 0.795893055 1 13.37788025 -6.736675452 24.99999785 0.887210097 0.737820167 0.456805894 0.089876806 229.2750341 231460.0989 0.028685627 0.028673493 1.83E-07 6.736675452 -0.14938993 ENDPLRT(ph)PEALPEEK ddPTM_A459_MK2206_30min_R2 1 ENDPLRTPEALPEEK 15 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 ENDPLRT(1)PEALPEEK 79.804 0.042065 4938000 35487 30973 26080 33010 35407 23338 30083 25440 21270 32455 TRUE FALSE 38203.912 29434.92586 26949.49418 30312.97741 34016.74327 24226.14394 26133.06596 28765.09535 23120.02615 31395.99601 1.216840262 0.937537572 0.858373602 0.965504563 1.083473933 0.771631642 0.832369387 0.916202669 0.736400468 1 14.93829296 -6.764455283 24.99963873 0.844899036 0.99703364 0.334922953 0.112243021 101.7770464 843650.5084 0.03870852 0.035601826 1.72E-07 6.764455283 0.152134605 ENDTVTIS(ph)PK ddPTM_A459_MK2206_30min_R1 1 ENDTVTISPK 10 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 ENDTVT(0.003)IS(0.997)PK 91.307 0.028215 5507900 3021.1 3034 2912.4 2053.1 2333.8 2661.9 2899.2 2032.1 2820.6 3802.3 TRUE FALSE 2764.139581 2836.486049 2714.714402 2211.230118 2240.839804 2812.614478 2705.799658 2014.333564 3113.811464 4273.35763 0.646830858 0.663760512 0.635264969 0.517445603 0.524374508 0.658174373 0.633178847 0.471370229 0.728656886 1 12.06115434 -8.562097422 7.943087073 0.999997943 0.596252272 0.79035662 0.063883763 0.333394181 67.18456482 0.064149698 0.016582274 2.74E-09 8.562097422 -0.403745671 ENDTVTIS(ph)PK ddPTM_A459_MK2206_30min_R2 2 ENDTVTISPK 10 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 ENDTVT(0.003)IS(0.997)PK;ENDTVT(0.006)IS(0.993)PK 115.12 0.0067477 19107200 178734 137184 144258 113323 112811 86337 169020 128198 75876 175726 TRUE FALSE 192418.0125 130371.642 149067.4897 104064.1484 108381.4733 89622.61503 146827.471 144953.9188 82475.55733 169992.075 1.131923429 0.766927764 0.876908466 0.612170587 0.6375678 0.527216431 0.863731271 0.852709862 0.485172955 1 17.37510796 ENESLTHSTDR ddPTM_A459_MK2206_30min_R1 1 ENESLTHSTDR 11 0 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;Q8WX93-4;Q8WX93-7;H0YA05 Q8WX93 PALLD Palladin 0 95.417 0.029847 1391600 663.93 451.62 474.27 384.14 825.74 753.38 906.27 622.75 270.87 361.08 FALSE TRUE 607.4592671 422.2194559 442.0778738 413.7265294 792.8490273 796.0357245 845.8143819 617.3053624 299.0279058 405.8133164 1.496893381 1.0404278 1.08936266 1.019499638 1.953728464 1.961581083 2.084245015 1.521156003 0.736860753 1 8.664672396 -6.244764358 24.87868077 1.616984817 1.147738616 0.151378141 0.420502621 1274.196219 1901065.74 0.129769865 0.167062995 5.69E-07 6.244764358 -0.469246201 ENESLTHSTDR ddPTM_A459_MK2206_30min_R2 1 ENESLTHSTDR 11 0 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;Q8WX93-4;Q8WX93-7;H0YA05 Q8WX93 PALLD Palladin 0 109.16 0.013428 1563300 6821.4 16800 12447 25052 26099 30743 21886 19500 21903 11983 FALSE TRUE 7343.651629 15965.73643 12861.97677 23005.17146 25074.22212 31912.94641 19012.34191 22048.71695 23808.08335 11591.99569 0.633510555 1.377306967 1.109556724 1.984573845 2.163063444 2.753015724 1.640126723 1.902063936 2.053838181 1 13.50084134 -5.755690591 5.930146346 2.000400706 1.065762289 0.444899003 0.449467567 0.135231014 17.07189116 0.122133829 0.200255202 1.76E-06 5.755690591 -0.934638417 ENFQNWLK ddPTM_A459_MK2206_30min_R2 1 ENFQNWLK 8 0 P37802;P37802-2;X6RJP6 P37802 TAGLN2 Transgelin-2 0 134.91 0.037275 8680900 35900 46341 34419 38820 39184 39528 41888 34618 37463 45424 FALSE TRUE 38648.5316 44039.77333 35566.51228 35648.28182 37645.43928 41032.26574 36388.05528 39142.69146 40721.46402 43941.8186 0.879538736 1.002229191 0.809400098 0.811260957 0.856710998 0.933786244 0.828096252 0.890784513 0.926713216 1 15.42330696 -8.564728545 2.031561782 0.999420237 0.875409298 0.325656026 0.055427564 0.46136192 4.353949592 0.055238792 0.015380984 2.72E-09 8.564728545 -0.124010939 ENGSGHEASLQLRPPPEPS(ph)TPVSGQDDLIQHQDMR ddPTM_A459_MK2206_30min_R2 1 ENGSGHEASLQLRPPPEPSTPVSGQDDLIQHQDMR 35 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 ENGS(0.001)GHEAS(0.042)LQLRPPPEPS(0.336)T(0.336)PVS(0.285)GQDDLIQHQDMR 40.064 0.027686 3849900 4854.9 8500.9 7029.1 12865 9637.6 11507 9303.1 5736.8 8417.1 6668.6 TRUE FALSE 5226.594877 8078.757667 7263.446686 11813.88835 9259.179399 11944.90695 8081.591795 6486.619457 9149.204143 6451.004128 0.810198656 1.252325608 1.12594048 1.831325498 1.435308243 1.851635298 1.252764939 1.005520897 1.418260469 1 12.65530802 -7.515703358 24.71131278 1.152962941 1.402895884 0.110383576 0.308570067 682.3922462 2350118.781 0.145842634 0.088605038 3.05E-08 7.515703358 0.249932943 ENIKPNET(ph)SPSFSK ddPTM_A459_MK2206_30min_R1 1 ENIKPNETSPSFSK 14 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 ENIKPNET(0.494)S(0.494)PS(0.013)FSK 213.69 1.85E-05 21741000 6660.6 6843.4 6873.7 4615.7 4276.3 5307.4 6497.5 5067.3 7170.1 7803.3 TRUE FALSE 6094.080994 6397.893416 6407.132395 4971.202014 4105.965916 5607.900401 6064.06363 5022.99713 7915.457553 8770.031716 0.694875594 0.729517706 0.730571177 0.566839685 0.468181422 0.63943901 0.691452873 0.572745606 0.90255746 1 13.09836634 -8.394318125 4.054887306 0.995183738 0.637246253 0.721279925 0.079061663 0.125424537 3.267978604 0.084097279 0.022151244 4.03E-09 8.394318125 -0.357937486 ENIKPNET(ph)SPSFSK ddPTM_A459_MK2206_30min_R2 1 ENIKPNETSPSFSK 14 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 ENIKPNET(0.603)S(0.374)PS(0.021)FS(0.002)K 84.94 0.034929 20035000 80692 75093 71394 65637 65918 55539 87746 72962 49863 87976 TRUE FALSE 86869.84156 71363.99082 73774.24033 60274.24714 63329.72811 57652.57556 76224.8448 82498.38392 54199.99361 85105.35032 1.020733024 0.838537067 0.866857842 0.708230997 0.744133334 0.677425983 0.895652794 0.969367773 0.636857652 1 16.37696221 -4.455816378 1.596068128 0.802545075 1.300416766 0.220356184 0.116101453 3.962503687 4.956209728 0.031942592 3.954370526 3.50E-05 4.455816378 0.49787169 ENIKPNETS(ph)PSFSK ddPTM_A459_MK2206_30min_R1 2 ENIKPNETSPSFSK 14 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 ENIKPNET(0.41)S(0.589)PS(0.001)FSK;ENIKPNET(0.015)S(0.834)PS(0.15)FS(0.001)K 186.08 0.00038895 23582600 6867.1 7422 6861.78 4984.47 5212.5 5378.28 7304.4 5146.49 7672.8 8842.4 TRUE FALSE 6283.017084 6938.826451 6396.021492 5368.374743 5004.875087 5682.793566 6817.136804 5101.494781 8470.415017 9937.863269 0.63223018 0.698221163 0.643601277 0.540194064 0.503616819 0.571832537 0.685976112 0.5133392 0.852337649 1 13.27871998 -8.454913019 3.932402545 0.997819763 0.60113269 0.810590771 0.065091516 0.08613131 2.570193692 0.06708396 0.017625937 3.51E-09 8.454913019 -0.396687072 ENIKPNETS(ph)PSFSK ddPTM_A459_MK2206_30min_R2 2 ENIKPNETSPSFSK 14 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 ENIKPNET(0.429)S(0.559)PS(0.012)FSK;ENIKPNET(0.365)S(0.634)PS(0.001)FSK 207.92 3.04E-05 54814000 149944 118842 128586 122911 109122 80485 151478 115635 80781 142433 TRUE FALSE 161423.8279 112940.4791 132872.9931 112868.7781 104837.322 83547.91307 131588.7566 130748.8915 87807.18536 137785.4229 1.171559549 0.819683801 0.964347246 0.819163419 0.760873827 0.606362497 0.955026692 0.948931235 0.637274855 1 17.07206374 -2.355971098 1.276013938 0.821781564 200 0.360951385 0.131565047 951.0665473 3.564111491 0.038146078 552247.9263 0.004405842 2.355971098 199.1782184 ENLPENVTASES(ph)DAEVER ddPTM_A459_MK2206_30min_R1 1 ENLPENVTASESDAEVER 18 0 Q9NX02;A0A0G2JMG8;A0A0G2JLX3;J3KN39;A0A0G2JNC8;A0A0G2JP37;A0A0G2JPQ2;A0A0G2JPB6;A0A0G2JLQ8;Q9NX02-5;Q9NX02-2;Q9NX02-4;Q9NX02-3;K7EMK2 Q9NX02 NLRP2 "NACHT, LRR and PYD domains-containing protein 2" 1 ENLPENVT(0.008)AS(0.004)ES(0.988)DAEVER 165.19 3.95E-07 11815000 5276.2 5212.6 5182.9 4589.8 6175.5 5318.2 5572.7 5670.7 4426.2 4441.6 TRUE FALSE 4827.431484 4873.258793 4831.099188 4943.307191 5929.516758 5619.311888 5200.955351 5621.121668 4886.319329 4991.85894 0.967060877 0.976241286 0.967795614 0.990273814 1.187837403 1.125695248 1.041887484 1.126057794 0.978857654 1 12.28536145 -6.030374699 23.64525199 1.084216326 0.97230031 0.418123815 0.058528952 311.183501 242241.1737 0.017019574 0.022010982 9.32E-07 6.030374699 -0.111916016 ENLPENVTASES(ph)DAEVER ddPTM_A459_MK2206_30min_R2 5 ENLPENVTASESDAEVER 18 0 Q9NX02;A0A0G2JMG8;A0A0G2JLX3;J3KN39;A0A0G2JNC8;A0A0G2JP37;A0A0G2JPQ2;A0A0G2JPB6;A0A0G2JLQ8;Q9NX02-5;Q9NX02-2;Q9NX02-4;Q9NX02-3;K7EMK2 Q9NX02 NLRP2 "NACHT, LRR and PYD domains-containing protein 2" 1 ENLPENVTAS(0.027)ES(0.973)DAEVER;ENLPENVTASES(1)DAEVER;ENLPENVT(0.007)AS(0.08)ES(0.913)DAEVER;ENLPENVT(0.004)AS(0.027)ES(0.969)DAEVER;ENLPENVT(0.021)AS(0.003)ES(0.976)DAEVER 237.09 1.14E-39 40022400 84148.6 106485.7 92424.5 98529 105284.2 102463.5 111205.7 78760.8 88635.8 92140.4 TRUE FALSE 90591.08152 101197.775 95505.8867 90478.86552 101150.2133 106362.8203 96604.25801 89055.10699 96345.18167 89133.86629 1.016348615 1.13534596 1.071488208 1.015089654 1.134812361 1.193293018 1.083810924 0.999116393 1.080904326 1 16.44368607 -7.629885778 6.82774012 1.030650029 1.097038945 0.231467994 0.055243889 0.34644774 19.74411165 0.027333004 0.015622154 2.34E-08 7.629885778 0.066388916 ENLS(ph)PGFSHLLSK ddPTM_A459_MK2206_30min_R1 1 ENLSPGFSHLLSK 13 0 H0YG46;J3KNE4;A0A0A0MTP3;Q99550-2;Q99550;F5H1U6 H0YG46 MPHOSPH9 M-phase phosphoprotein 9 1 ENLS(0.991)PGFS(0.009)HLLSK 105.06 0.0049146 5001200 12473 9733.9 9497.3 8662.3 9969.9 8976.7 9785.4 8852.1 8293.5 8095.8 TRUE FALSE 11412.10585 9100.221341 8852.649737 9329.471847 9572.777771 9484.952996 9132.63382 8774.707023 9155.639004 9098.768824 1.254247258 1.000159639 0.972950287 1.025355411 1.052095944 1.042443563 1.003721932 0.964383994 1.006250316 1 13.15145563 -4.76030066 24.99971479 1.008219811 1.254247551 0.890876629 0.025907861 9.648447701 211731.4477 0.007253482 0.043508896 1.74E-05 4.76030066 0.246027741 ENLS(ph)PGFSHLLSK ddPTM_A459_MK2206_30min_R2 1 ENLSPGFSHLLSK 13 0 H0YG46;J3KNE4;A0A0A0MTP3;Q99550-2;Q99550;F5H1U6 H0YG46 MPHOSPH9 M-phase phosphoprotein 9 1 ENLS(0.974)PGFS(0.026)HLLSK 111.01 0.0035712 5462500 85969 98738 75637 99543 101120 76556 96117 72004 67191 92873 TRUE FALSE 92550.85274 93834.8145 78158.69983 91410.01848 97149.52071 79469.39223 83496.72244 81415.17003 73035.15173 89842.56162 1.030144856 1.044436098 0.869951818 1.017446707 1.081330707 0.884540587 0.929367117 0.906198227 0.812923746 1 16.45511144 -6.785311539 24.94846001 0.902165864 1.003431422 0.364029439 0.067140923 263.9041691 275800.5535 0.023925061 0.021110954 1.64E-07 6.785311539 0.101265558 ENNVSQPASSSSSSSSSNNGSAS(ph)PTK ddPTM_A459_MK2206_30min_R2 1 ENNVSQPASSSSSSSSSNNGSASPTK 26 0 A0A3B3IRW4;Q02446 A0A3B3IRW4 SP4 Transcription factor Sp4 1 ENNVSQPASSSSSSSSSNNGS(0.018)AS(0.902)PT(0.08)K 135.87 7.70E-10 0 14247 15474 13535 13304 12769 9799.3 16794 11862 8648.7 15080 TRUE FALSE 15337.76127 14705.58366 13986.25014 12217.02064 12267.6249 10172.21923 14588.92763 13412.40413 9400.948293 14587.94083 1.051400019 1.008064389 0.958754241 0.837473964 0.840942875 0.697303296 1.000067644 0.919417228 0.64443285 1 13.83248863 -5.546715567 2.285643826 0.844016655 1.032913948 0.319594292 0.108200009 0.363805916 3.771245393 0.030973973 0.07252427 2.84E-06 5.546715567 0.188897293 ENPEDVLSPT(ph)SVATYLSSK ddPTM_A459_MK2206_30min_R1 1 ENPEDVLSPTSVATYLSSK 19 0 Q5JTU8;B1AMJ5;A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8 Q5JTU8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 ENPEDVLS(0.123)PT(0.438)S(0.438)VAT(0.001)YLSSK 106.7 0.0039547 0 958.67 838.06 889.33 592.55 1018.1 827.65 1018.2 937.15 786.61 821.8 TRUE FALSE 877.1300823 783.5021417 828.9647574 638.1883037 977.5469211 874.5108278 950.2777358 928.9565964 868.3809244 923.6107883 0.949675008 0.848303367 0.897526066 0.690971036 1.058397036 0.946839122 1.028872495 1.005787945 0.940202232 1 9.851141214 -6.28937872 24.99934013 0.996089804 0.850375362 0.528769341 0.069363506 578.628164 517738.6418 0.020934711 0.023742557 5.14E-07 6.28937872 -0.145714442 ENPMRFSCQRRT(ph)R ddPTM_A459_MK2206_30min_R1 1 ENPMRFSCQRRTR 13 3 P01024 P01024 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha chain;Complement C3c alpha chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha chain fragment 2 1 ENPMRFS(0.053)CQRRT(0.947)R 66.708 0.043136 0 322.52 341.98 328.69 178.6 345.2 357.02 327.91 322.31 285.39 277.06 TRUE FALSE 295.0879804 319.7170398 306.3794386 192.3558029 331.449953 377.2341639 306.0357222 319.4920777 315.0573118 311.3842845 0.947664976 1.026760359 0.983927108 0.617744095 1.06444021 1.21147464 0.982823275 1.026037901 1.011795802 1 8.282552323 ENPPVEDS(ph)SDEDDKRNQGNLYDK ddPTM_A459_MK2206_30min_R2 1 ENPPVEDSSDEDDKRNQGNLYDK 23 2 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 1 ENPPVEDS(0.495)S(0.495)DEDDKRNQGNLY(0.009)DK 90.468 0.0025938 0 10793 6797.5 8482.8 6710.2 8355.6 6577 13330 8444.1 7011.1 8399.1 TRUE FALSE 11619.32038 6459.946034 8765.612318 6161.955195 8027.51716 6827.292344 11579.75499 9547.772863 7620.912805 8125.038055 1.430063502 0.795066557 1.07883954 0.758390933 0.987997485 0.840278199 1.425193939 1.175105002 0.937954106 1 12.98815885 -7.221364092 24.99629549 1.149155977 0.967827442 0.105054732 0.214498405 1020.226612 636350.167 0.07925588 0.061390571 6.01E-08 7.221364092 -0.181328535 ENPPVEDSS(ph)DEDDKR ddPTM_A459_MK2206_30min_R2 1 ENPPVEDSSDEDDKR 15 1 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 1 ENPPVEDS(0.195)S(0.805)DEDDKR 115.38 0.0012219 18035000 62569 18576 20668 20325 17253 20996 47838 19461 26797 27214 TRUE FALSE 67359.33075 17653.54285 21357.0608 18664.38248 16575.56053 21795.01749 41556.81314 22004.61952 29127.75462 26326.00941 2.558660893 0.670574206 0.811253254 0.7089712 0.62962678 0.827889148 1.578545859 0.835850933 1.106424987 1 14.68420123 -4.756524702 24.98945096 0.903110776 2.558663438 0.779937764 0.263080651 72.94333958 370848.8909 0.069388439 0.558030911 1.75E-05 4.756524702 1.655552662 ENPQEYPDFYDFS(ph)NAACRPSTPALSR ddPTM_A459_MK2206_30min_R2 1 ENPQEYPDFYDFSNAACRPSTPALSR 26 1 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 ENPQEY(0.004)PDFY(0.107)DFS(0.269)NAACRPS(0.269)T(0.269)PALS(0.082)R 57.922 0.0045323 4897300 9711.2 14291 11087 18893 12916 13568 13976 9209.9 12133 12959 TRUE FALSE 10454.69694 13581.32972 11456.63505 17349.38146 12408.85294 14084.33975 12140.93441 10413.66555 13188.30641 12536.14889 0.833964005 1.083373358 0.913887921 1.383948262 0.989845689 1.123498123 0.968474012 0.83069096 1.052022158 1 13.6138066 -7.417362722 6.705771285 0.945286725 1.06123915 0.0825744 0.146469294 0.551760671 30.28184226 0.06107073 0.040808895 3.83E-08 7.417362722 0.115952426 ENPVLDVVS(ph)NPEQTAGEER ddPTM_A459_MK2206_30min_R1 1 ENPVLDVVSNPEQTAGEER 19 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 ENPVLDVVS(0.992)NPEQT(0.008)AGEER 246.9 1.68E-37 3857100 1089.4 996.62 1052.2 880.07 1029.2 1017.3 1131 792.56 1033.4 1058.6 TRUE FALSE 996.7408093 931.7398569 980.7795956 947.8531439 988.2047846 1074.898647 1055.553054 785.6307315 1140.825628 1189.74736 0.837775181 0.783140932 0.824359548 0.796684385 0.830600527 0.903467982 0.887207729 0.660334083 0.958880571 1 10.21643954 -8.501313318 24.62184068 1.000000043 0.819230827 0.527012495 0.062669947 400.4635879 457220.5859 0.059722917 0.015420391 3.15E-09 8.501313318 -0.180769216 ENPVLDVVS(ph)NPEQTAGEER ddPTM_A459_MK2206_30min_R2 2 ENPVLDVVSNPEQTAGEER 19 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 ENPVLDVVS(0.999)NPEQT(0.001)AGEER;ENPVLDVVS(1)NPEQTAGEER 295.9 1.65E-173 2369300 20225.5 24041 19444.3 25002 22574 22806.1 20190 17431.6 18700.8 22321 TRUE FALSE 21773.97983 22847.1589 20092.56326 22959.25662 21687.63133 23674.00212 17539.02875 19709.96997 20327.36178 21592.6676 1.008396935 1.058098023 0.930527141 1.063289495 1.004397962 1.096390801 0.812267807 0.912808475 0.941401135 1 14.39825387 -7.253704271 24.99608897 0.909353392 1.024527893 0.44561772 0.059980565 520.6782705 1682581.627 0.022390657 0.017004491 5.58E-08 7.253704271 0.115174501 ENPYYDSR ddPTM_A459_MK2206_30min_R1 2 ENPYYDSR 8 0 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ; 218.73 0.0093602 63662000 11349.9 10918.5 11585.1 10250.5 13106.5 11427.6 11821.5 11222.5 10068 9366.8 FALSE TRUE 10384.5314 10207.70367 10798.73569 11039.99529 12584.44035 12074.62084 11032.9093 11124.38287 11114.60463 10527.2299 0.98644482 0.969647644 1.02579081 1.048708482 1.195418023 1.146989374 1.048035372 1.056724606 1.055795754 1 13.36183824 -5.682711496 2.487372696 1.08921567 0.981142487 0.372359704 0.052614911 0.296163264 3.70886348 0.016421673 0.032224652 2.08E-06 5.682711496 -0.108073184 ENQEPLRS(ph)PEVGDEEALRPLTK ddPTM_A459_MK2206_30min_R1 1 ENQEPLRSPEVGDEEALRPLTK 22 2 P48681 P48681 NES Nestin 1 ENQEPLRS(0.99)PEVGDEEALRPLT(0.01)K 56.304 0.0092539 15778000 2054.3 2313.2 1985 1558.5 2126 1737.8 2140.4 1844.8 2068.1 1899.4 TRUE FALSE 1879.570997 2162.61026 1850.263731 1678.53594 2041.316918 1836.192734 1997.617821 1828.671108 2283.086396 2134.712012 0.88047989 1.013068858 0.866750981 0.786305568 0.956249324 0.860159461 0.935778602 0.856635976 1.069505574 1 11.05982574 -8.262634295 24.9979549 1.034752798 0.896153291 0.457701783 0.061073983 97.96342067 2049288.649 0.048875323 0.015335174 5.46E-09 8.262634295 -0.138599506 ENQEPLRS(ph)PEVGDEEALRPLTK ddPTM_A459_MK2206_30min_R2 1 ENQEPLRSPEVGDEEALRPLTK 22 2 P48681 P48681 NES Nestin 1 ENQEPLRS(1)PEVGDEEALRPLTK 72.793 0.0010771 22078000 77913 81284 80923 100700 78458 93575 83597 72204 53240 79298 TRUE FALSE 83878.07918 77247.55476 83620.93243 92472.48788 75377.3447 97136.0622 72620.61348 81641.31071 57870.71896 76710.51275 1.09343656 1.007000892 1.090084389 1.205473468 0.982620791 1.26626793 0.946683979 1.064277995 0.754404017 1 16.22713668 -7.853753042 1.932030568 0.893726004 1.096641969 0.33936338 0.109282692 0.373255138 2.651536529 0.078802152 0.029587332 1.40E-08 7.853753042 0.202915965 ENQPENSQT(ph)PTK ddPTM_A459_MK2206_30min_R1 2 ENQPENSQTPTK 12 0 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ENQPENSQT(0.999)PT(0.001)K;ENQPENS(0.035)QT(0.965)PT(0.001)K 233.28 6.51E-10 10686700 5544.2 5634.2 5415.7 4346.7 4352.8 4210.5 5575.6 4852.2 4632.6 6043.5 TRUE FALSE 5072.636676 5267.412556 5048.097373 4681.483587 4179.418759 4448.894871 5203.661897 4809.777727 5114.175348 6792.214406 0.746831059 0.775507403 0.743218201 0.68924261 0.615324916 0.654999181 0.76612156 0.708131022 0.752946689 1 12.72966629 -9.168135803 1.171908781 1.000484248 0.709592612 0.767544774 0.047203795 1.799608426 2.801842942 0.052518241 0.015677386 6.79E-10 9.168135803 -0.290891635 ENQPENSQT(ph)PTK ddPTM_A459_MK2206_30min_R2 2 ENQPENSQTPTK 12 0 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ENQPENS(0.042)QT(0.957)PT(0.001)K;ENQPENS(0.001)QT(0.998)PT(0.001)K 136.33 0.0033113 17240400 39279 33399 30215 30174 30659 28434 37490 33335 31337 33600 TRUE FALSE 42286.23044 31740.45423 31222.35302 27708.68768 29455.17361 29516.07579 32567.51797 37691.99896 34062.63562 32503.63475 1.300969284 0.976520148 0.960580355 0.852479665 0.906211685 0.908085389 1.001965418 1.159624123 1.047963893 1 14.98831344 -9.769094001 11.52999862 1.000002897 1.003196078 0 0.126031522 0 0 0.128392119 0.031139663 1.70E-10 9.769094001 0.003193181 ENQPENSQT(ph)PTKK ddPTM_A459_MK2206_30min_R1 2 ENQPENSQTPTKK 13 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ENQPENS(0.024)QT(0.975)PT(0.001)KK;ENQPENS(0.02)QT(0.659)PT(0.321)KK 212.03 0.00064606 104896000 8972.1 9070.2 8171.7 7543.7 5975.6 5176.5 7459.3 8065.8 2005.44 5541 TRUE FALSE 8208.975781 8479.728331 7617.027772 8124.717081 5737.579198 5469.588957 6961.703707 7995.281561 2213.912665 6227.460912 1.318189852 1.36166705 1.22313538 1.304659667 0.921335241 0.878301612 1.117904039 1.283875029 0.355508079 1 12.60442835 -6.259186758 24.16531433 0.947542624 1.30055419 0.39680602 0.22603908 140.5027125 1507257.073 0.066831482 0.082070002 5.51E-07 6.259186758 0.353011566 ENQPENSQT(ph)PTKK ddPTM_A459_MK2206_30min_R2 1 ENQPENSQTPTKK 13 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ENQPENS(0.007)QT(0.963)PT(0.03)KK 208.38 0.001251 16446000 12002 11479 12606 12240 16442 9324.5 14469 10329 10791 13249 TRUE FALSE 12920.88235 10908.96955 13026.27775 11239.95285 15796.40447 9679.350381 12569.20292 11679.03576 11729.58167 12816.68622 1.008129725 0.851153673 1.016353021 0.876978078 1.232487415 0.755214743 0.98069054 0.911236771 0.915180529 1 13.64573568 -9.667211117 13.09573973 0.999995669 0.949011404 0.015498325 0.120118949 0 0 0.108873571 0.02640572 2.15E-10 9.667211117 -0.050984265 ENQPENSQTPT(ph)KK ddPTM_A459_MK2206_30min_R1 2 ENQPENSQTPTKK 13 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ENQPENS(0.002)QT(0.081)PT(0.917)KK;ENQPENS(0.008)QT(0.158)PT(0.835)KK 109.1 0.0075499 136394000 14564.9 14544.3 13405.7 11983.9 9696.7 8306.9 11413.2 12596.4 3403.9 8816.7 TRUE FALSE 13326.07877 13597.46343 12495.75843 12906.90205 9310.459906 8777.229499 10651.84625 12486.271 3757.747586 9908.979359 1.344848777 1.372236528 1.261054038 1.302546063 0.939598274 0.885785426 1.074969063 1.26009658 0.379226503 1 13.27452075 -6.251712751 5.900295892 0.941144588 1.321608805 0.456055624 0.211862365 0.158877148 23.19103338 0.062907212 0.077652117 5.60E-07 6.251712751 0.380464217 ENQPENSQTPT(ph)KK ddPTM_A459_MK2206_30min_R2 2 ENQPENSQTPTKK 13 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ENQPENS(0.001)QT(0.193)PT(0.807)KK;ENQPENSQT(0.204)PT(0.796)KK 114.87 0.0051353 254889000 153220 152836 170846 146706 184514 125293 177117 155666 131418 181841 TRUE FALSE 164950.641 145246.3865 176541.9204 134719.6505 177269.0533 130061.1129 153861.3251 176012.0807 142848.5001 175907.5431 0.937712153 0.825697318 1.003606311 0.765854881 1.007739919 0.739372006 0.87467156 1.000594276 0.812065802 1 17.42445782 -11.1558679 5.103680336 1.00152864 0.885867028 0.116746194 0.094668822 0.001537596 0.00011057 0.085592853 0.020491491 6.98E-12 11.1558679 -0.115661612 ENQSEGKGSDS(ph)DSEGDNPEK ddPTM_A459_MK2206_30min_R1 1 ENQSEGKGSDSDSEGDNPEK 20 1 Q9UN37;I3L4J1 Q9UN37 VPS4A Vacuolar protein sorting-associated protein 4A 1 ENQSEGKGS(0.009)DS(0.753)DS(0.238)EGDNPEK 70.112 0.0062352 6676700 1397.8 1419.3 1358 1001.9 886.74 961.8 1051.6 1113.2 900.41 739.85 TRUE FALSE 1278.90977 1326.903312 1265.822744 1079.066512 851.4192681 1016.256285 981.4496828 1103.46741 994.0108416 831.5082036 1.538060315 1.595778979 1.522321413 1.297722027 1.023945722 1.222184316 1.180324714 1.327067376 1.19543119 1 9.699586687 -5.835068808 3.204477797 1.177466257 1.564312764 0.786890228 0.091270954 0.109910824 2.264324754 0.026589449 0.043530007 1.46E-06 5.835068808 0.386846506 ENQSEGKGSDSDS(ph)EGDNPEK ddPTM_A459_MK2206_30min_R1 1 ENQSEGKGSDSDSEGDNPEK 20 1 Q9UN37;I3L4J1 Q9UN37 VPS4A Vacuolar protein sorting-associated protein 4A 1 ENQS(0.001)EGKGS(0.006)DS(0.083)DS(0.909)EGDNPEK 79.462 0.0024664 7426400 1559.4 1678.6 1756.8 1921.8 1588 1158.4 1135.9 1647.9 1343.8 994.96 TRUE FALSE 1426.764841 1569.322835 1637.553311 2069.817369 1524.746597 1223.987607 1060.126184 1633.492584 1483.492819 1118.223156 1.275921388 1.403407563 1.464424432 1.850987754 1.363544109 1.094582597 0.948045278 1.460793022 1.32665185 1 10.12699241 -6.533332878 10.34990438 1.186288264 1.504129481 0.39355096 0.194690044 0.276927812 252.399144 0.067558251 0.06866577 2.93E-07 6.533332878 0.317841217 ENS(ph)PAAFPDR ddPTM_A459_MK2206_30min_R2 1 ENSPAAFPDR 10 0 K7EJD2;A0A0A0MR03;Q9Y5B0;A0A0J9YWJ4;A0A0J9YWB6;Q9Y5B0-4 K7EJD2 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 ENS(1)PAAFPDR 86.803 0.034546 16131000 56054 71285 63392 64416 55747 33843 71193 62247 47146 62730 TRUE FALSE 60345.53734 67745.09056 65505.45764 59153.00674 53558.09267 35130.91908 61845.27358 70382.89663 51246.67386 60683.12524 0.994436874 1.11637445 1.079467437 0.974785107 0.882586262 0.578924024 1.019151096 1.159842977 0.844496286 1 15.88900777 -5.93766561 3.708574124 0.911481536 1.067980859 0.177694617 0.143226773 0.422096421 11.81263017 0.045349966 0.068831341 1.15E-06 5.93766561 0.156499323 ENS(ph)PAVS(ph)PTTNSTAPFGLKPR ddPTM_A459_MK2206_30min_R2 1 ENSPAVSPTTNSTAPFGLKPR 21 1 Q9Y2L9-2;Q9Y2L9;Q9Y2L9-3 Q9Y2L9-2 LRCH1 Leucine-rich repeat and calponin homology domain-containing protein 1 2 ENS(0.745)PAVS(0.958)PT(0.27)T(0.017)NS(0.005)T(0.005)APFGLKPR 67.285 0.033839 0 18900 22626 20894 17142 17561 14494 22943 17836 13688 18304 TRUE FALSE 20346.99853 21502.42574 21590.59553 15741.44377 16871.4669 15045.57933 19930.55654 20167.22644 14878.5575 17706.74198 1.14911024 1.214363759 1.219343206 0.88900848 0.952827286 0.849709074 1.125591403 1.138957492 0.840276405 1 14.11201116 -5.750751282 24.98635079 0.977341485 1.196281608 0.523274323 0.097558033 179.9918794 420776.2595 0.027826576 0.04757471 1.78E-06 5.750751282 0.218940122 ENS(ph)PNSFPR ddPTM_A459_MK2206_30min_R1 1 ENSPNSFPR 9 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 ENS(0.987)PNS(0.013)FPR 85.924 0.034527 12699000 6182.5 6485.3 5232.4 4853 4253.7 4315.2 6358 4930.3 6832.8 8247.8 TRUE FALSE 5656.645909 6063.105791 4877.239266 5226.778901 4084.266122 4559.522895 5933.869421 4887.194907 7543.094011 9269.599732 0.610236264 0.654084962 0.526154247 0.563862416 0.440608682 0.491879156 0.640143004 0.527228257 0.813745386 1 13.17829133 -8.462408936 2.763410727 0.998865532 0.555035068 0.839690825 0.063597143 0.095667407 1.57338139 0.065092049 0.017569266 3.45E-09 8.462408936 -0.443830464 ENS(ph)PNSFPR ddPTM_A459_MK2206_30min_R2 4 ENSPNSFPR 9 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 ENS(0.831)PNS(0.169)FPR;ENS(0.955)PNS(0.045)FPR;ENS(0.998)PNS(0.002)FPR;ENS(0.995)PNS(0.005)FPR 103.46 0.015218 50064300 296382 316662 280692 297488 257090 254908 333198 237091 242344 311366 TRUE FALSE 319073.2338 300937.0255 290050.1312 273182.2788 246995.3548 264608.7026 289448.7024 268079.6078 263422.6431 301206.1529 1.059318446 0.999106501 0.962962172 0.90696115 0.820020947 0.878497003 0.960965437 0.890020357 0.874559303 1 18.20039172 -5.308611181 1.631778511 0.897869009 1.052800196 0.53262207 0.047424068 0.355170761 1.627025325 0.014180147 0.062364254 4.91E-06 5.308611181 0.154931187 ENS(ph)PSSQSAGLSSINK ddPTM_A459_MK2206_30min_R1 1 ENSPSSQSAGLSSINK 16 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2 H3BSS6 ZNF106 Zinc finger protein 106 1 ENS(0.288)PS(0.288)S(0.288)QS(0.136)AGLSSINK 138.05 0.00040569 7067200 2034 2221 2343.8 1769.3 1683.6 1650.5 2114.6 1721.9 2133.8 2874.5 TRUE FALSE 1860.997619 2076.412496 2184.709386 1905.571793 1616.538647 1743.949884 1973.538892 1706.84561 2355.616146 3230.614761 0.576050615 0.642729836 0.676251905 0.589848042 0.500381124 0.539819821 0.610886484 0.528334616 0.729154146 1 11.65759301 -8.598845755 3.499682655 0.999787328 0.585854784 0.865811741 0.050269183 0.122256212 3.818795933 0.053549354 0.014118714 2.52E-09 8.598845755 -0.413932543 ENS(ph)PSSQSAGLSSINK ddPTM_A459_MK2206_30min_R2 1 ENSPSSQSAGLSSINK 16 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2 H3BSS6 ZNF106 Zinc finger protein 106 1 ENS(0.873)PS(0.102)S(0.025)QSAGLSSINK 186.45 7.43E-14 0 28571 24279 23303 25197 25865 18277 32011 25007 19070 32542 TRUE FALSE 30758.41773 23073.34016 24079.91039 23138.3245 24849.41014 18972.54404 27807.91725 28275.50076 20728.67413 31480.15721 0.977073193 0.732948696 0.764923448 0.735012991 0.789367409 0.602682633 0.883347471 0.898200748 0.658467936 1 14.94215512 -10.80078868 6.32808983 1.000005919 0.780369323 0.271418267 0.106882701 8.71E-06 9.94E-07 0.100982176 0.024491115 1.58E-11 10.80078868 -0.219636596 ENS(ph)SPCQGNGEQAGR ddPTM_A459_MK2206_30min_R2 2 ENSSPCQGNGEQAGR 15 0 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 1 ENS(0.991)S(0.009)PCQGNGEQAGR;ENS(0.937)S(0.063)PCQGNGEQAGR 255.23 9.39E-29 11735500 26688 27074 28264 31456 23933.3 26110 31484 24364 21712 30228 TRUE FALSE 28731.2538 25729.54453 29206.30765 28885.94418 22993.55839 27103.63435 27350.11298 27548.45845 23600.47051 29241.66284 0.982545143 0.879893345 0.998790931 0.987835211 0.786328688 0.926884169 0.935313191 0.942096166 0.807083737 1 14.83573773 ENS(ph)SPENKNWLLAMAAK ddPTM_A459_MK2206_30min_R1 1 ENSSPENKNWLLAMAAK 17 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 ENS(0.582)S(0.418)PENKNWLLAMAAK 62.002 0.029775 20689000 8127.9 8512.5 8479.5 7453.5 7878.1 7135.8 7594.1 7729.5 7006.1 6001.7 TRUE FALSE 7436.579424 7958.334703 7903.935165 8027.569861 7564.298595 7539.822829 7087.511445 7661.921796 7734.409167 6745.235907 1.102493601 1.179845273 1.171780391 1.190109578 1.121428324 1.117799723 1.050743301 1.135901235 1.146647689 1 12.71965319 -6.584047102 2.605765046 1.095390322 1.162802707 0.344225696 0.045538328 0.345565187 4.762289702 0.015979487 0.016450907 2.61E-07 6.584047102 0.067412385 ENS(ph)SPSVTSANLDHTKPCWYWDK ddPTM_A459_MK2206_30min_R2 1 ENSSPSVTSANLDHTKPCWYWDK 23 1 G3V5E1;O75909-1;O75909;O75909-4;G3V235;G3V2Q3;O75909-2 G3V5E1 CCNK Cyclin-K 1 ENS(0.487)S(0.376)PS(0.111)VT(0.021)S(0.005)ANLDHTKPCWYWDK 78.991 0.000285 4667200 37141 36151 34321 35674 26423 30128 46107 34718 31227 35618 TRUE FALSE 39984.54352 34355.79391 35465.24501 32759.32008 25385.50026 31274.54215 40053.09552 39255.7618 33943.06801 34455.78758 1.160459427 0.997097914 1.029297181 0.950763932 0.736755768 0.907671667 1.162448991 1.139308214 0.985119494 1 15.07245871 -9.281629078 12.84489999 1.000004779 1.003826807 0 0.123483759 0 0 0.131744307 0.031952688 5.23E-10 9.281629078 0.003822028 ENS(ph)SSQDPQTEGTR ddPTM_A459_MK2206_30min_R2 1 ENSSSQDPQTEGTR 14 0 A0A0C4DG49;P15151-3;P15151-2;P15151 A0A0C4DG49 PVR Poliovirus receptor 1 ENS(0.701)S(0.232)S(0.068)QDPQTEGTR 228.49 3.38E-13 6320600 22685 12789 15282 11256 9065.5 11071 21217 11962 18402 17320 TRUE FALSE 24421.78104 12153.91686 15791.49425 10336.34879 8709.54292 11492.31466 18431.18241 13525.47447 20002.5727 16754.84982 1.457594745 0.725396944 0.942502883 0.616916827 0.519822202 0.685909739 1.100050589 0.807257279 1.193837779 1 14.03229113 -8.252089549 24.11668003 1.09691889 0.838565083 0.117943424 0.258646064 752.806746 1941787.94 0.1829228 0.066910317 5.60E-09 8.252089549 -0.258353807 ENSFGS(ph)PLEFR ddPTM_A459_MK2206_30min_R1 2 ENSFGSPLEFR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ENS(0.156)FGS(0.844)PLEFR;ENS(0.002)FGS(0.998)PLEFR 172.85 0.00022365 74103000 7261.1 7599.3 6907.4 5205.2 6573.5 7145.4 8150.2 5299.1 8065.4 10012.5 TRUE FALSE 6643.505315 7104.584189 6438.544933 5606.105406 6311.663575 7549.966373 7606.515029 5252.770527 8903.827192 11252.92409 0.590380355 0.631354493 0.572166388 0.498190991 0.560890976 0.670933734 0.675958975 0.466791608 0.791245646 1 13.45801232 -8.523450861 4.615870468 0.99958893 0.587915595 0.813572565 0.063735407 0.065235587 4.883731541 0.063358512 0.016519046 3.00E-09 8.523450861 -0.411673335 ENSFGS(ph)PLEFR ddPTM_A459_MK2206_30min_R2 3 ENSFGSPLEFR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ENS(0.026)FGS(0.974)PLEFR;ENS(0.025)FGS(0.975)PLEFR;ENS(0.016)FGS(0.984)PLEFR 152.11 0.00058411 204059000 147393 114845 120687 120462 107038 114949 140029 115165 101393 142697 TRUE FALSE 158677.5214 109141.9643 124710.6443 110619.8693 102835.1503 119323.4647 121643.0241 130217.4609 110211.9799 138040.8086 1.149497189 0.790649993 0.903433163 0.801356283 0.744961953 0.86440717 0.881210602 0.943325834 0.798401437 1 17.0747353 -4.75389895 24.99057794 0.853810444 1.149497717 0.582734931 0.073735151 188.487265 624634.9749 0.017915622 0.184331901 1.76E-05 4.75389895 0.295687273 ENSGPVENGVS(ph)DQEGEEQAR ddPTM_A459_MK2206_30min_R2 2 ENSGPVENGVSDQEGEEQAR 20 0 Q8TEQ6 Q8TEQ6 GEMIN5 Gem-associated protein 5 1 ENSGPVENGVS(1)DQEGEEQAR;ENSGPVENGVS(1)DQEGEEQAR 330.43 6.76E-155 14641900 122598 51239 70737 59576 50659 55886 83023 56696 47838 86540 TRUE FALSE 131984.1971 48694.54577 73095.33627 54708.45023 48669.87312 58012.78089 72121.98037 64106.36187 51998.86277 83716.20689 1.576566857 0.581662113 0.873132443 0.653498913 0.581367395 0.692969534 0.861505592 0.76575808 0.62113257 1 16.35321933 -4.755347988 24.99996813 0.72879098 1.576568244 0.783439035 0.132397786 86.11692706 353402.2997 0.031477524 0.281734198 1.76E-05 4.755347988 0.847777264 ENSLCGSAPNS(ph)R ddPTM_A459_MK2206_30min_R2 2 ENSLCGSAPNSR 12 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 ENSLCGS(0.301)APNS(0.699)R;ENS(0.002)LCGS(0.327)APNS(0.671)R 122.12 0.0036209 24888000 8840.5 17929.5 16681.4 21792.2 22446.7 47426 50357 41941 50994 59982 TRUE FALSE 9517.335477 17039.1471 17237.54955 20011.70755 21565.32977 49230.82966 43745.06541 47422.8327 55429.36594 58024.79225 0.164021879 0.293652876 0.297072146 0.34488202 0.371657165 0.848444738 0.753903008 0.817285696 0.95527039 1 15.82438183 -6.718807521 3.309370386 0.863584847 0.283211689 0.932536646 0.078326632 0.061716742 1.387553031 0.02888292 0.027606966 1.91E-07 6.718807521 -0.580373158 down ENSPS(ph)SQSAGLSSINK ddPTM_A459_MK2206_30min_R2 1 ENSPSSQSAGLSSINK 16 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2 H3BSS6 ZNF106 Zinc finger protein 106 1 ENS(0.226)PS(0.634)S(0.117)QS(0.022)AGLS(0.001)SINK 88.021 0.014271 6769100 27838 24602 26692 24499 20740 19647 34522 26269 18692 35153 TRUE FALSE 29969.29868 23380.30045 27581.89796 22497.35333 19925.64339 20394.68035 29989.21993 29702.44849 20317.79637 34005.96049 0.881295463 0.687535365 0.811090102 0.661570884 0.585945614 0.599738401 0.881881279 0.873448303 0.597477503 1 15.05350002 -10.62608874 7.017332127 1.000000134 0.730622315 0.325447166 0.116133575 2.58E-07 3.31E-08 0.116587775 0.028276674 2.37E-11 10.62608874 -0.26937782 ENSQLDT(ph)SPPCLGGNKK ddPTM_A459_MK2206_30min_R2 1 ENSQLDTSPPCLGGNKK 17 1 Q9Y3E2 Q9Y3E2 BOLA1 BolA-like protein 1 1 ENS(0.042)QLDT(0.55)S(0.408)PPCLGGNKK 70.414 0.039993 19970000 11830 16592 16241 14281 14269 14468 14316 10614 13818 15448 TRUE FALSE 12735.7139 15768.06541 16782.46683 13114.19662 13708.72736 15018.58988 12436.292 12001.28624 15019.86466 14943.93303 0.852233068 1.055148292 1.123028777 0.877559916 0.917344004 1.004995797 0.832196717 0.803087529 1.005081101 1 13.86727227 -5.793086451 24.99966015 0.911600785 1.014638128 0.163572605 0.091821881 301.1876151 237922.4557 0.026131 0.038762456 1.61E-06 5.793086451 0.103037342 ENSQLDTS(ph)PPCLGGNKK ddPTM_A459_MK2206_30min_R2 1 ENSQLDTSPPCLGGNKK 17 1 Q9Y3E2 Q9Y3E2 BOLA1 BolA-like protein 1 1 ENS(0.002)QLDT(0.332)S(0.666)PPCLGGNKK 65.085 0.022717 14880000 70329 81219 78231 91654 87225 64639 88970 77318 55981 85000 TRUE FALSE 75713.44231 77185.78256 80839.18249 84165.57501 83800.10823 67098.88244 77288.13213 87423.72807 60850.12619 82226.45696 0.920791739 0.938697658 0.983128612 1.023582654 1.019138016 0.816025461 0.939942386 1.063206799 0.740030988 1 16.32731505 ENSS(ph)SQDPQTEGTR ddPTM_A459_MK2206_30min_R1 1 ENSSSQDPQTEGTR 14 0 A0A0C4DG49;P15151-3;P15151-2;P15151 A0A0C4DG49 PVR Poliovirus receptor 1 ENS(0.26)S(0.693)S(0.047)QDPQTEGTR 190.34 0.00010147 1199200 429.66 457.26 235.21 199.17 254.47 242.92 538.33 346.9 401.27 365.19 TRUE FALSE 393.1151608 427.4922909 219.2446005 214.5101079 244.3339211 256.6739205 502.4189879 343.8670899 442.9834525 410.4324942 0.957807109 1.041565414 0.534179441 0.522644067 0.595308423 0.625374268 1.224120885 0.837816437 1.079308921 1 8.681001144 -7.247225058 24.87918655 1.021796272 0.705651515 0.424857997 0.183439823 823.1337083 1440724.927 0.077095302 0.059416288 5.66E-08 7.247225058 -0.316144757 ENSSALS(ph)PNHR ddPTM_A459_MK2206_30min_R2 1 ENSSALSPNHR 11 0 A0AVK6 A0AVK6 E2F8 Transcription factor E2F8 1 ENSSALS(1)PNHR 100.68 0.010599 2949200 33408 49027 43053 47469 48772 58337 56224 41622 49469 49805 TRUE FALSE 35965.74217 46592.39047 44488.36553 43590.63085 46856.96622 60557.05541 48841.72126 47062.13831 53771.7242 48179.86693 0.746489031 0.967051041 0.92338083 0.904747847 0.972542458 1.256895448 1.013737156 0.976800919 1.116062115 1 15.55614279 -6.528392447 24.99670813 1.072803503 0.899545507 0.484529565 0.090744311 137.6848751 624196.6635 0.029897329 0.02998629 2.96E-07 6.528392447 -0.173257996 ENTLFDIHRS(ph)PAR ddPTM_A459_MK2206_30min_R2 1 ENTLFDIHRSPAR 13 1 Q9ULI0-2;Q9ULI0;C9JG15 Q9ULI0-2 ATAD2B ATPase family AAA domain-containing protein 2B 1 ENTLFDIHRS(1)PAR 62.162 0.047749 4179700 8862.2 15342 9985.1 13934 18703 15998 15187 13172 13953 12366 TRUE FALSE 9540.696846 14580.13859 10317.99825 12795.54763 17968.62624 16606.8151 13192.92866 14893.62563 15166.60672 11962.49843 0.79755052 1.218820522 0.862528702 1.069638395 1.502079716 1.388239689 1.102857295 1.245026339 1.267846078 1 13.54623112 -6.014425818 24.21099723 1.264817694 0.982307203 0.388832335 0.165138481 450.4185252 755944.473 0.047094577 0.063317837 9.67E-07 6.014425818 -0.282510491 ENVATTDTLESTTVGT(ph)SV ddPTM_A459_MK2206_30min_R1 1 ENVATTDTLESTTVGTSV 18 0 Q15046;Q15046-2 Q15046 KARS Lysine--tRNA ligase 1 ENVATTDTLESTTVGT(0.875)S(0.124)V 145.1 0.00065014 2259100 456.83 317.25 374.09 258.85 383.86 356.83 537.08 319.77 406.64 254.5 TRUE FALSE 417.9742096 296.5969673 348.6978131 278.7866719 368.5700434 377.0334062 501.2523732 316.9742846 448.9116832 286.0293814 1.461298163 1.036945806 1.219097882 0.974678442 1.288574067 1.318163206 1.752450642 1.108187848 1.569460036 1 8.16001954 -6.591434696 3.558410425 1.380883593 1.163496537 0.103179918 0.232896952 0.435100216 11.11954878 0.075732458 0.076932261 2.56E-07 6.591434696 -0.217387056 ENVELS(ph)PTTGHCNSGR ddPTM_A459_MK2206_30min_R2 1 ENVELSPTTGHCNSGR 16 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 ENVELS(0.942)PT(0.046)T(0.012)GHCNSGR 104.86 0.002493 4811500 31825 28928 31739 42004 33295 43842 39086 32906 37540 41216 TRUE FALSE 34261.54647 27491.47759 32797.16242 38572.13884 31987.67101 45510.43803 33953.96125 37206.92718 40805.16134 39871.1253 0.859307236 0.689508445 0.822579302 0.967420371 0.802276604 1.141438515 0.85159275 0.933179761 1.023426378 1 15.2830567 -5.655774831 3.94713573 0.95391751 0.770156782 0.401614622 0.095432686 0.211674723 6.08555293 0.025482929 0.045985825 2.21E-06 5.655774831 -0.183760728 ENVEYIEREES(ph)DGEYDEFGR ddPTM_A459_MK2206_30min_R1 4 ENVEYIEREESDGEYDEFGR 20 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 ENVEYIEREES(0.988)DGEY(0.012)DEFGR;ENVEYIEREES(0.796)DGEY(0.204)DEFGR;ENVEYIEREES(0.937)DGEY(0.062)DEFGR;ENVEY(0.008)IEREES(0.988)DGEY(0.004)DEFGR 92.565 0.00075951 291084000 11444 12160.1 12826.9 11876.9 12859.7 11115.2 12003.3 11582.5 8834.9 7973.1 TRUE FALSE 10470.62771 11368.47528 11956.24577 12791.6609 12347.47092 11744.53302 11202.58176 11481.23542 9753.319471 8960.867822 1.168483668 1.268680166 1.334273198 1.427502464 1.377932491 1.310646832 1.250167058 1.281263785 1.088434699 1 13.12942274 -8.341900427 1.590741926 0.995555998 1.315843392 0.711115586 0.066963814 0.212014696 1.07802527 0.069487438 0.020704924 4.55E-09 8.341900427 0.320287394 ENVEYIEREES(ph)DGEYDEFGR ddPTM_A459_MK2206_30min_R2 4 ENVEYIEREESDGEYDEFGR 20 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 ENVEY(0.001)IEREES(0.998)DGEY(0.001)DEFGR;ENVEYIEREES(0.999)DGEY(0.001)DEFGR;ENVEY(0.002)IEREES(0.994)DGEY(0.004)DEFGR;ENVEYIEREES(0.998)DGEY(0.002)DEFGR 94.313 0.00061989 480816000 341912 484539 388500 494867 462757 506492 451305 364748 486858 392514 TRUE FALSE 368089.0456 460477.4978 401452.3961 454434.7831 444586.835 525766.908 392048.1114 412421.816 529204.0288 379706.3003 0.96940463 1.212720193 1.057270832 1.196806012 1.170870314 1.384667327 1.032503572 1.086160055 1.393719378 1 18.53452441 -4.754511844 24.8633976 1.172888476 0.969404255 0.17941821 0.128944513 390.7417703 1402266.128 0.030829023 0.298037223 1.76E-05 4.754511844 -0.203484222 ENVEYIEREES(ph)DGEYDEFGRK ddPTM_A459_MK2206_30min_R2 1 ENVEYIEREESDGEYDEFGRK 21 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 ENVEY(0.126)IEREES(0.488)DGEY(0.386)DEFGRK 55.763 0.035815 8813000 9140.9 12758 10945 13975 12778 10280 12865 10025 12437 11779 TRUE FALSE 9840.734332 12124.45627 11309.90084 12833.1978 12276.27152 10671.2126 11175.81005 11335.30192 13518.74778 11394.65219 0.863627442 1.064047947 0.992562181 1.126247434 1.077371323 0.936510604 0.980794311 0.994791392 1.186411621 1 13.47606927 -4.755971397 24.97019109 1.037015244 0.863627164 0.353297922 0.071436742 206.5137191 942967.9488 0.018014153 0.152527085 1.75E-05 4.755971397 -0.17338808 ENVEYIEREESDGEY(ph)DEFGRK ddPTM_A459_MK2206_30min_R2 1 ENVEYIEREESDGEYDEFGRK 21 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 ENVEY(0.001)IEREES(0.01)DGEY(0.988)DEFGRK 68.952 0.020703 5288800 4826.9 8941.2 8705.1 7837.9 7696.2 6356.9 8360.3 5017.6 5707.7 4534.6 TRUE FALSE 5196.451175 8497.19301 8995.323689 7197.518498 7394.008518 6598.816284 7262.582567 5673.417548 6204.145429 4386.636373 1.184609512 1.937063455 2.050619865 1.640783025 1.685575892 1.504299815 1.655615362 1.293341199 1.414328634 1 12.0988994 -8.228211706 0.582079211 1.007743213 1.741160166 0.459399836 0.227668681 0.682553444 0.552712911 0.232371613 0.113476131 5.91E-09 8.228211706 0.733416953 ENVPNSDSQPPPSCLTTAVPS(ph)PSKPR ddPTM_A459_MK2206_30min_R1 1 ENVPNSDSQPPPSCLTTAVPSPSKPR 26 1 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 ENVPNSDSQPPPS(0.011)CLT(0.082)T(0.061)AVPS(0.649)PS(0.197)KPR 98.991 0.00048705 0 508.71 743.41 649.39 549.1 642.71 600.18 781.75 478.71 694.91 549.71 TRUE FALSE 465.4415432 695.0138739 605.3112161 591.3917771 617.1094997 634.1616729 729.6008839 474.5246889 767.1483813 617.8122249 0.753370562 1.12495973 0.979765682 0.957235473 0.998862559 1.026463458 1.180942776 0.768072676 1.24171771 1 9.271024608 -4.747673401 24.99585733 1.023293833 0.75336989 0.306797596 0.12467716 856.9524224 1555939.333 0.028505271 0.565579426 1.79E-05 4.747673401 -0.269923943 ENVPNSDSQPPPSCLTTAVPS(ph)PSKPR ddPTM_A459_MK2206_30min_R2 1 ENVPNSDSQPPPSCLTTAVPSPSKPR 26 1 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 ENVPNSDSQPPPS(0.001)CLT(0.006)T(0.006)AVPS(0.708)PS(0.279)KPR 71.78 0.00032675 11687000 30675 30082 27863 30431 33298 22810 39909 29735 25030 30036 TRUE FALSE 33023.50159 28588.17162 28791.93851 27944.68996 31990.55321 23678.05053 34668.90036 33621.4666 27207.06416 29055.92778 1.136549548 0.983901524 0.990914444 0.961755211 1.100999199 0.814912906 1.193178226 1.157129342 0.936368798 1 14.8265449 -7.314297431 24.99999714 1.084763063 1.000210966 0.09932847 0.105408534 713.5411237 337477.116 0.042731326 0.028809464 4.85E-08 7.314297431 -0.084552098 ENVSDLT(ph)LGPGNSPITR ddPTM_A459_MK2206_30min_R2 1 ENVSDLTLGPGNSPITR 17 0 Q6DCA0 Q6DCA0 AMMECR1L AMMECR1-like protein 1 ENVS(0.003)DLT(0.995)LGPGNS(0.003)PITR 108.25 0.005519 12700000 29205 33277 23338 32483 29509 32935 31066 26741 24811 24842 TRUE FALSE 31440.95725 31624.51257 24116.07727 29829.03499 28350.32839 34188.3645 26986.99688 30236.14052 26969.01593 24031.40757 1.308327744 1.315965886 1.003523293 1.241252095 1.179719844 1.422653434 1.122988606 1.258192656 1.122240378 1 14.55263353 -8.541079959 2.918251571 1.000133944 1.228172675 0.313449118 0.108279803 0.317045677 6.814659584 0.103220575 0.027595257 2.88E-09 8.541079959 0.228038731 ENVSDLTLGPGNS(ph)PITR ddPTM_A459_MK2206_30min_R1 2 ENVSDLTLGPGNSPITR 17 0 Q6DCA0 Q6DCA0 AMMECR1L AMMECR1-like protein 1 ENVSDLTLGPGNS(1)PITR;ENVSDLT(0.292)LGPGNS(0.707)PITR 210.47 3.41E-09 29855000 7709 7220.6 6771.5 5619.2 7232.4 6540.5 6850 6532.2 5567.1 4834.4 TRUE FALSE 7053.309068 6750.537628 6311.869446 6051.991758 6944.318193 6910.817458 6393.048999 6475.089664 6145.819967 5433.32197 1.298157758 1.242432837 1.161696193 1.113865843 1.278098046 1.271932254 1.176637246 1.191736786 1.131134875 1 12.40761883 -8.654066218 1.110556817 1.000251177 1.220401635 0.617043071 0.053645531 0.490895179 1.262692136 0.055285256 0.01751691 2.22E-09 8.654066218 0.220150458 ENVSDLTLGPGNS(ph)PITR ddPTM_A459_MK2206_30min_R2 3 ENVSDLTLGPGNSPITR 17 0 Q6DCA0 Q6DCA0 AMMECR1L AMMECR1-like protein 1 ENVSDLT(0.001)LGPGNS(0.999)PITR;ENVSDLT(0.003)LGPGNS(0.996)PIT(0.001)R;ENVSDLT(0.001)LGPGNS(0.999)PITR 176.39 9.38E-08 16814000 113601 136957 114666 115748 131044 149030 115734 100148 115957 110171 TRUE FALSE 122298.3799 130155.9145 118488.9072 106291.0181 125898.5541 154701.4411 100537.9868 113237.6875 126042.7303 106576.1293 1.147521314 1.221248279 1.111777168 0.997324812 1.181301619 1.451558075 0.943344325 1.062505161 1.182654419 1 16.70152482 -8.983117619 0.53385808 0.997280463 1.158268658 0.09910128 0.131405203 4.610766556 2.42549977 0.201602341 0.06713366 1.04E-09 8.983117619 0.160988195 ENYSHHTQDDR ddPTM_A459_MK2206_30min_R1 4 ENYSHHTQDDR 11 0 Q92804-2;Q92804;A0A075B7D9;A0A075B7E4;A0A075B7F2 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 0 ;;; 139.76 0.0006441 4223230 4678.16 2359.54 2105.2 2310.39 2552.6 3569.73 5515.57 3802.68 413.218 2314.74 FALSE TRUE 4280.257926 2205.933517 1962.304889 2488.336638 2450.924537 3771.845028 5147.636389 3769.43357 456.1734898 2601.507467 1.645299113 0.847944334 0.754295313 0.956497981 0.942117049 1.449868999 1.978712902 1.448942053 0.175349675 1 11.34513213 -6.747906889 24.76784608 1.286642252 0.999844349 0.020374518 0.485208433 630.9559861 1154805.277 0.166032734 0.165127369 1.79E-07 6.747906889 -0.286797904 ENYSHHTQDDR ddPTM_A459_MK2206_30min_R2 4 ENYSHHTQDDR 11 0 Q92804-2;Q92804;A0A075B7D9;A0A075B7E4;A0A075B7F2 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 0 ;;; 144.7 0.00041487 23362400 13237.7 29794.2 20631.6 45839.8 39961.9 48460.5 45664 39415.4 39103.3 24430.4 FALSE TRUE 14251.18849 28314.66335 21319.44725 42094.54171 38392.79501 50304.69829 39668.26195 44567.12811 42504.43435 23633.23805 0.603014638 1.198086496 0.902095904 1.781158452 1.62452538 2.128557169 1.678494579 1.885781712 1.798502358 1 14.52852969 -5.761348825 24.99999988 1.750350809 0.930767594 0.586778158 0.30469239 1.507817838 415974.996 0.078771898 0.126022017 1.73E-06 5.761348825 -0.819583215 ENYSHHTQDDRR ddPTM_A459_MK2206_30min_R1 3 ENYSHHTQDDRR 12 1 Q92804-2;Q92804;A0A075B7D9;A0A075B7E4;A0A075B7F2 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 0 ;; 111.52 0.0045626 10534300 5027.32 2396.07 2785.38 2898.2 2784.35 3625.9 5230.76 5487.03 291.932 1523.36 FALSE TRUE 4599.720034 2240.085407 2596.316166 3121.419866 2673.443444 3831.195325 4881.825544 5439.057475 322.2793761 1712.085338 2.686618437 1.308395883 1.516464226 1.823168389 1.56151296 2.237736193 2.85139148 3.176861197 0.188237916 1 10.7415389 -6.7643202 24.97600027 2.08693331 1.740917125 0 0.880471743 327.7048787 2841093.212 0.29916155 0.27547135 1.72E-07 6.7643202 -0.346016184 ENYSHHTQDDRR ddPTM_A459_MK2206_30min_R2 2 ENYSHHTQDDRR 12 1 Q92804-2;Q92804;A0A075B7D9;A0A075B7E4;A0A075B7F2 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 0 ; 89.189 0.023621 1868980 3159.8 6448.8 3225.65 5344.9 9098.9 10173.71 6055.08 4829.09 7882.31 3098.57 FALSE TRUE 3401.716717 6128.561969 3333.191561 4908.204573 8741.631468 10560.87766 5260.040723 5460.268644 8567.899076 2997.463915 1.134864944 2.044582402 1.112003899 1.637452431 2.91634252 3.523270993 1.754830374 1.821629484 2.858382726 1 11.54952667 -6.105651158 6.699318348 2.383544552 1.473479111 0.24768866 0.707593681 0.344799901 18.92371242 0.210649666 0.273715762 7.84E-07 6.105651158 -0.910065441 EPAITSQNS(ph)PEAR ddPTM_A459_MK2206_30min_R1 6 EPAITSQNSPEAR 13 0 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 EPAITSQNS(1)PEAR;EPAITSQNS(1)PEAR;EPAIT(0.001)S(0.002)QNS(0.998)PEAR;EPAITSQNS(1)PEAR;EPAIT(0.052)S(0.131)QNS(0.816)PEAR;EPAIT(0.007)S(0.03)QNS(0.963)PEAR 212.43 4.54E-06 605905000 9743.03 9787.64 9710.94 7994.2 9881.5 8824.61 9403.8 7991.02 8598.02 8933.52 TRUE FALSE 8914.334136 9150.462857 9051.788449 8609.914669 9487.898931 9324.251792 8776.48966 7921.155355 9491.814947 10040.2719 0.887857841 0.911376001 0.901548139 0.857537998 0.944984262 0.928685187 0.874128684 0.788938331 0.945374293 1 13.29351072 EPAITSQNS(ph)PEAR ddPTM_A459_MK2206_30min_R2 6 EPAITSQNSPEAR 13 0 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 EPAITSQNS(1)PEAR;EPAIT(0.001)S(0.003)QNS(0.996)PEAR;EPAIT(0.001)S(0.001)QNS(0.997)PEAR;EPAIT(0.021)S(0.098)QNS(0.881)PEAR;EPAIT(0.001)S(0.02)QNS(0.979)PEAR;EPAIT(0.004)S(0.082)QNS(0.914)PEAR 169.02 0.00026482 931202300 95297 105459 100050 101559.3 97516 109095.9 103168.2 85546.6 89373.9 97958.1 TRUE FALSE 102593.0116 100222.0594 103385.6171 93261.58032 93687.03186 113247.6209 89622.09141 96727.83435 97147.48027 94761.73522 1.082641758 1.057621615 1.091005951 0.984169191 0.988658889 1.195077535 0.945762456 1.020747817 1.025176249 1 16.532017 -1.522878873 0.140283328 0.988735351 1.300228308 0.10415841 0.063910958 192.4007458 1.803777185 0.277582927 12.01702714 0.029999991 1.522878873 0.311492958 EPALPLEPDSGGNT(ph)SPGVTANGEAR ddPTM_A459_MK2206_30min_R2 1 EPALPLEPDSGGNTSPGVTANGEAR 25 0 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;Q5VY93 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 EPALPLEPDS(0.034)GGNT(0.878)S(0.087)PGVT(0.001)ANGEAR 77.584 0.00034987 5129200 39571 60244 51158 57511 50099 52398 54511 42094 45132 47380 TRUE FALSE 42600.58618 57252.37056 52863.58219 52812.16733 48131.86153 54392.04261 47353.64022 47595.83033 49057.49978 45833.99448 0.929453928 1.249124612 1.15337061 1.152248848 1.050134558 1.186718357 1.033155429 1.0384395 1.07033001 1 15.4841304 -7.288898432 23.73841208 1.038684492 1.12581961 0.20177244 0.081967442 638.2236164 551742.1074 0.032911055 0.022196901 5.14E-08 7.288898432 0.087135118 EPALPLEPDSGGNTS(ph)PGVTANGEAR ddPTM_A459_MK2206_30min_R1 2 EPALPLEPDSGGNTSPGVTANGEAR 25 0 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;Q5VY93 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 EPALPLEPDSGGNT(0.354)S(0.646)PGVTANGEAR;EPALPLEPDSGGNT(0.17)S(0.829)PGVTANGEAR 196.68 4.26E-31 24488000 8317.8 7604.9 7163.8 6576.2 8320.2 7151.8 7920.3 6560.7 6487.3 6161 TRUE FALSE 7610.327431 7109.819628 6677.541215 7082.700063 7988.788816 7556.728736 7391.951238 6503.340492 7161.67805 6924.271193 1.09907992 1.026796818 0.964367372 1.022880223 1.153737136 1.091339222 1.067542133 0.939209385 1.034286187 1 12.75744651 -7.736567434 24.99265039 0.990060814 1.059090373 0.268896606 0.052569607 324.5351975 326110.9266 0.027160679 0.015672518 1.83E-08 7.736567434 0.069029559 EPALPLEPDSGGNTS(ph)PGVTANGEAR ddPTM_A459_MK2206_30min_R2 1 EPALPLEPDSGGNTSPGVTANGEAR 25 0 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;Q5VY93 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 EPALPLEPDSGGNT(0.029)S(0.968)PGVT(0.002)ANGEAR 128.92 4.27E-08 5631800 44246 46120 48860 49209 44438 49666 43817 35420 43621 41227 TRUE FALSE 47633.50778 43829.74786 50488.96801 45188.46729 42693.14084 51556.07443 38063.77527 40049.51562 47415.07573 39881.76637 1.194368056 1.098992142 1.265966195 1.13306083 1.070492727 1.292722944 0.954415482 1.004206164 1.188891066 1 15.28344169 -7.272295776 24.9991548 1.037228697 1.169787302 0.385786857 0.085746107 823.476278 1896220.674 0.034955224 0.023832117 5.34E-08 7.272295776 0.132558605 EPAPAS(ph)PAPAGVEIR ddPTM_A459_MK2206_30min_R2 2 EPAPASPAPAGVEIR 15 0 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 EPAPAS(1)PAPAGVEIR;EPAPAS(1)PAPAGVEIR 161.94 0.00011605 25416000 44831 37780.8 36200.7 32753.2 31543.1 28923.3 34536.8 28982 23643.2 33146.1 TRUE FALSE 48263.29583 35904.66041 37407.61327 30077.15879 30304.5594 30023.99645 30002.07667 32770.04691 25699.6428 32064.54547 1.505191953 1.119762026 1.166634759 0.938019184 0.945111149 0.936361205 0.935677591 1.02200254 0.801497181 1 14.96869134 -1.522878745 0.64862507 0.932355499 50.32764345 0.844686406 0.072512947 74.96340258 0.486443091 0.028717756 5315.262191 0.03 1.522878745 49.39528795 EPASGREGEEHS(ph)TIK ddPTM_A459_MK2206_30min_R1 1 EPASGREGEEHSTIK 15 1 E9PRX9;Q8IZU9 E9PRX9 KIRREL3 Kin of IRRE-like protein 3 1 EPASGREGEEHS(0.5)T(0.5)IK 66.826 0.034129 1949000 1246.6 1192.5 1133.5 1003.6 1103.7 815.61 1461.2 976.38 1384.2 1673.3 TRUE FALSE 1140.570124 1114.868033 1056.561178 1080.897446 1059.737292 861.7891334 1363.726014 967.8436126 1528.092543 1880.601037 0.60649234 0.592825385 0.561821012 0.574761698 0.563509895 0.458251972 0.725154346 0.5146459 0.812555408 1 10.8769781 -8.484595609 3.234399912 0.998912492 0.575832841 0.81755691 0.065468518 0.08152129 1.929759777 0.059857387 0.015905941 3.28E-09 8.484595609 -0.423079652 EPCPVVPPREAS(ph)IR ddPTM_A459_MK2206_30min_R1 2 EPCPVVPPREASIR 14 1 A0A384DVL8;Q8TD84-2;Q8TD84 A0A384DVL8 DSCAML1 Down syndrome cell adhesion molecule-like protein 1 1 EPCPVVPPREAS(1)IR;EPCPVVPPREAS(1)IR 103.85 0.03131 56638000 0 0 0 67.704 65.982 0 0 61.91 0 0 TRUE FALSE 0 0 0 72.91857381 63.35379722 0 0 61.3687274 0 0 0 EPDATPPS(ph)PR ddPTM_A459_MK2206_30min_R1 1 EPDATPPSPR 10 0 A0A494C0S2;A0A090HNM7;A0A1W2PS85;R4GMW8;P28715 A0A494C0S2 ERCC5-201;BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells 1 EPDAT(0.048)PPS(0.952)PR 81.625 0.044637 9147900 2087.5 2585.4 2376.4 1876.9 2045.4 2521 2603.2 1814.2 2591.8 2838 TRUE FALSE 1909.947163 2417.08999 2215.096589 2021.459163 1963.927387 2663.736841 2429.545278 1798.338641 2861.226885 3189.592866 0.598805943 0.757805178 0.69447628 0.633767145 0.615729803 0.83513381 0.761710156 0.563814479 0.897050817 1 11.63915657 -8.460223725 5.162023996 0.998960235 0.690138658 0.647274906 0.080058047 0.11469038 5.811711595 0.077639017 0.020188487 3.47E-09 8.460223725 -0.308821577 EPDEEKS(ph)DQQGEALDSSQK ddPTM_A459_MK2206_30min_R2 1 EPDEEKSDQQGEALDSSQK 19 1 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 EPDEEKS(0.998)DQQGEALDS(0.001)S(0.001)QK 84.327 0.0022231 4666000 21472 14715 13030 10449 4896.1 3759 14439 13166 6688.7 16546 TRUE FALSE 23115.91283 13984.2745 13464.4137 9595.283275 4703.854513 3902.051379 12543.14196 14886.84141 7270.471036 16006.10538 1.444193468 0.873683771 0.841204864 0.599476453 0.293878767 0.243785186 0.783647343 0.930072685 0.454231112 1 13.96633469 EPDPDS(ph)DWEPEER ddPTM_A459_MK2206_30min_R2 2 EPDPDSDWEPEER 13 0 Q9NPE2-3;Q9NPE2 Q9NPE2-3 NGRN Neugrin 1 EPDPDS(1)DWEPEER;EPDPDS(1)DWEPEER 168.93 0.0002672 34437000 43397 40727 45867 43374 40254 45089 43996 35867 48768 39826 TRUE FALSE 46719.50769 38704.5564 47396.18289 39830.20545 38673.4257 46804.89349 38219.27235 40554.94005 53009.75249 38526.48088 1.212659621 1.004622159 1.230223519 1.0338397 1.003814125 1.214875909 0.992026042 1.052651037 1.375930302 1 15.23356279 EPEAASSRGS(ph)PVR ddPTM_A459_MK2206_30min_R1 3 EPEAASSRGSPVR 13 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EPEAAS(0.002)S(0.01)RGS(0.987)PVR;EPEAASS(0.002)RGS(0.998)PVR;EPEAAS(0.091)S(0.335)RGS(0.574)PVR 98.182 0.0070194 159848000 14481.2 13606.1 13795.2 15269.3 18339.3 12924.3 12093.1 16061.2 6756.3 3522.2 TRUE FALSE 13249.4979 12720.34042 12858.82026 16445.34413 17608.80685 13656.0627 11286.39136 15920.77862 7458.641563 3958.556727 3.347052678 3.213378333 3.24836074 4.154378796 4.448289632 3.44975799 2.851137963 4.021864462 1.884182058 1 11.95075881 -8.433138999 3.66625029 1.017375089 3.583121957 0.779289397 0.467669413 0.102151524 2.491877653 0.484616967 0.128006903 3.69E-09 8.433138999 2.565746867 EPEDEGEDDD ddPTM_A459_MK2206_30min_R1 2 EPEDEGEDDD 10 0 P39687 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 0 ; 161.9 0.0057864 10473700 11622.4 12234.8 10999.3 9298.6 9852.8 8362.5 10913.8 9269.9 4162.7 8718.5 FALSE TRUE 10633.85385 11438.3123 10252.69816 10014.77978 9460.342112 8835.977523 10185.76032 9188.854242 4595.427561 9798.613601 1.085240656 1.167339867 1.046341715 1.022060895 0.965477617 0.901757931 1.039510356 0.937770854 0.468987527 1 13.25836192 -6.746525001 0.605404473 0.805385701 1.125782984 0.357795134 0.143979117 0.948400723 0.75933713 0.116496741 0.133068851 1.79E-07 6.746525001 0.320397283 EPEDEGEDDD ddPTM_A459_MK2206_30min_R2 2 EPEDEGEDDD 10 0 P39687 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 0 ; 138.83 0.022085 6178700 31637 41523 38884 44298 36049 37551 40919 34299 34298 41155 FALSE TRUE 34059.15304 39461.0282 40180.37315 40678.7117 34633.53513 38980.02962 35546.28615 38781.99707 37281.17804 39812.11572 0.855497188 0.99118139 1.009249884 1.021767142 0.869924507 0.979099676 0.89285097 0.974125498 0.936427953 1 15.28091992 -6.233732158 24.99598585 0.940168065 0.973822705 0.051425698 0.055938987 2113.1482 1906369.227 0.016217189 0.020930155 5.84E-07 6.233732158 0.033654639 EPEPAAGPQAEESATVSAPAPMS(ph)PTR ddPTM_A459_MK2206_30min_R1 2 EPEPAAGPQAEESATVSAPAPMSPTR 26 0 Q9BWG6-2;Q9BWG6 Q9BWG6-2 SCNM1 Sodium channel modifier 1 1 EPEPAAGPQAEES(0.043)AT(0.355)VS(0.021)APAPMS(0.421)PT(0.16)R;EPEPAAGPQAEESATVSAPAPMS(0.72)PT(0.28)R 121.12 5.10E-09 9917700 3806.1 3577.9 3981.8 2802 3701.5 3590 3795.1 3390.9 3741.8 3646.3 TRUE FALSE 3482.371208 3344.97806 3711.52651 3017.810526 3554.061417 3793.262698 3541.935804 3361.253719 4130.7735 4098.031172 0.849766891 0.816240267 0.90568528 0.736404971 0.867260708 0.925630513 0.864301821 0.820211847 1.00798977 1 12.00071524 -8.26709063 24.87795211 1.003994919 0.849067681 0.615442151 0.049260612 309.7954433 1363758.828 0.043643819 0.012507713 5.41E-09 8.26709063 -0.154927237 EPEPAAGPQAEESATVSAPAPMS(ph)PTR ddPTM_A459_MK2206_30min_R2 1 EPEPAAGPQAEESATVSAPAPMSPTR 26 0 Q9BWG6-2;Q9BWG6 Q9BWG6-2 SCNM1 Sodium channel modifier 1 1 EPEPAAGPQAEES(0.001)AT(0.034)VS(0.085)APAPMS(0.666)PT(0.215)R 69.612 0.00062894 4126900 17018 18153 17851 23891 19391 18867 19092 18793 15578 21262 TRUE FALSE 18320.91116 17251.54842 18446.14343 21939.02888 18629.61191 19584.99691 16585.19747 21249.30963 16932.94628 20568.22268 0.890738663 0.838747649 0.896827291 1.066646799 0.905747288 0.952196853 0.80635054 1.033113554 0.823257631 1 14.32812951 -12.37675676 0.008808266 1.951543763 3.88E-06 0.057671505 0.08247921 40033.15441 39.50903849 4785.61942 3997.819317 4.20E-13 12.37675676 -1.951539886 EPES(ph)PPASAPIPLFGADTIGQR ddPTM_A459_MK2206_30min_R1 1 EPESPPASAPIPLFGADTIGQR 22 0 Q96AY4 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 EPES(0.789)PPAS(0.211)APIPLFGADTIGQR 82.942 0.00056169 4628200 694.79 613.9 917.91 560.17 956 563.36 646.07 627.3 762.4 650.24 TRUE FALSE 635.694462 573.9349984 855.6048266 603.3143905 917.9204956 595.2569564 602.9718491 621.8155822 841.6542083 730.7966403 0.869865058 0.785355278 1.170783744 0.825557148 1.256054619 0.8145316 0.825088425 0.850873619 1.15169414 1 9.513326191 EPES(ph)PPASAPIPLFGADTIGQR ddPTM_A459_MK2206_30min_R2 2 EPESPPASAPIPLFGADTIGQR 22 0 Q96AY4 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 EPES(0.993)PPAS(0.007)APIPLFGADTIGQR;EPES(0.98)PPAS(0.02)APIPLFGADTIGQR 119.65 3.29E-05 8984200 27139 31886 32527 31140 29068 30502 35182 23456 28344 27813 TRUE FALSE 29216.78271 30302.58761 33611.43395 28595.76239 27926.64427 31662.77498 30562.56114 26521.77974 30809.30989 26905.46409 1.085905176 1.126261473 1.249241932 1.062823607 1.037954379 1.17681579 1.135923954 0.985739538 1.145094907 1 14.71561157 -9.373357112 0.245638451 0.95908601 1.146352239 0.203374225 0.069520768 10.24470422 1.12277557 0.542223378 0.148906293 4.23E-10 9.373357112 0.187266229 EPFFHGHDNYDQLVR ddPTM_A459_MK2206_30min_R1 2 EPFFHGHDNYDQLVR 15 0 P68400;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8Y5A0;A0A2R8YDP2;A0A2R8YF43;P68400-2 P68400;P68400-2 CSNK2A1 Casein kinase II subunit alpha 0 ; 167.03 4.26E-05 9536800 3599.1 3785.6 4410.7 3342.9 3585.1 4316.2 4694 3556.4 3932.5 3636.7 FALSE TRUE 3292.977645 3539.156752 4111.313973 3600.370737 3442.297875 4560.579514 4380.871825 3525.30677 4341.297448 4087.241852 0.805672325 0.865903433 1.005889576 0.880880278 0.842205575 1.115808577 1.071840616 0.862514844 1.0621582 1 11.9969119 -6.745930923 24.99588747 1.016957655 0.886351483 0.447336452 0.078843084 261.1307834 420878.9203 0.027179867 0.027084095 1.80E-07 6.745930923 -0.130606172 EPFPPS(ph)SPLQK ddPTM_A459_MK2206_30min_R1 2 EPFPPSSPLQK 11 0 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 EPFPPS(0.693)S(0.307)PLQK;EPFPPS(0.5)S(0.5)PLQK 110.64 0.0087072 5676400 4780.1 4209.7 4795.6 3460.4 4580.3 4243.8 4646.1 3484.9 4028.4 3987.8 TRUE FALSE 4373.527394 3935.647765 4470.088033 3726.920608 4397.856952 4484.080289 4336.167146 3454.431887 4447.166596 4481.83877 0.975833272 0.878132384 0.997378144 0.831560616 0.981261749 1.000500134 0.967497353 0.770762195 0.992263851 1 12.12987503 -4.470438072 17.54294102 0.931205567 1.346932299 0.02123187 0.07742868 8984961.149 69070639.2 0.018718288 131594162.5 3.39E-05 4.470438072 0.415726732 EPFPPS(ph)SPLQK ddPTM_A459_MK2206_30min_R2 2 EPFPPSSPLQK 11 0 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 EPFPPS(0.5)S(0.5)PLQK;EPFPPS(0.5)S(0.5)PLQK 126.12 0.0032197 16488400 173179 163108 169617 138202 147870 121615 172272 118108 106022 148529 TRUE FALSE 186437.7174 155008.2939 175271.9461 126910.4545 142063.8808 126243.144 149652.4795 133545.1211 115243.6019 143682.5109 1.297567228 1.078825063 1.219855813 0.883270022 0.988734676 0.878625681 1.041549723 0.929445903 0.802071186 1 17.13252494 -5.759052165 24.99992975 0.93372697 1.186756985 0.689841391 0.081854214 35.30315581 369700.161 0.02170759 0.035437973 1.74E-06 5.759052165 0.253030015 EPFPPSS(ph)PLQK ddPTM_A459_MK2206_30min_R1 3 EPFPPSSPLQK 11 0 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 EPFPPS(0.342)S(0.658)PLQK;EPFPPS(0.138)S(0.862)PLQK;EPFPPS(0.205)S(0.795)PLQK 168.82 0.00045689 22015600 13741.5 15094.4 14318.8 11380.3 11216.9 10687.61 12942.9 10598.02 12013.8 13520.7 TRUE FALSE 12572.71327 14111.75182 13346.87975 12256.81268 10770.10712 11292.73324 12079.50276 10505.36263 13262.6775 15195.74639 0.827383726 0.928664605 0.878329988 0.806594975 0.70875802 0.743150942 0.794926583 0.691335743 0.872788816 1 13.89137992 -5.818510372 4.174916355 0.781347254 0.884096876 0.108562506 0.087468775 0.315813435 11.14374932 0.023494601 0.037249279 1.52E-06 5.818510372 0.102749622 EPFPPSS(ph)PLQK ddPTM_A459_MK2206_30min_R2 2 EPFPPSSPLQK 11 0 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 EPFPPS(0.317)S(0.683)PLQK;EPFPPS(0.227)S(0.773)PLQK 185.57 1.90E-05 15879400 154028 134997 141881 144896 129740 99296 144928 103972 93572 134014 TRUE FALSE 165820.5021 128293.2453 146611.2417 133057.5333 124645.7557 103074.7789 125898.7795 117561.4974 101710.7234 129641.1342 1.279073214 0.989602923 1.130900641 1.02635274 0.961467643 0.795077732 0.971132969 0.9068225 0.784555952 1 16.98416402 -4.777349854 0.511484209 0.881578346 1.443457028 0.595268155 0.088341814 3.153893 0.631481689 0.05430031 1.072962534 1.67E-05 4.777349854 0.561878682 EPGGRS(ph)PAFVQLAPLSSK ddPTM_A459_MK2206_30min_R1 2 EPGGRSPAFVQLAPLSSK 18 1 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 EPGGRS(1)PAFVQLAPLSSK;EPGGRS(1)PAFVQLAPLSSK 98.572 0.0017815 26901000 4743.4 4655.4 5510.8 4925 5366.2 4381.9 4434.7 5213.3 3851.1 3255.5 TRUE FALSE 4339.948921 4352.332614 5136.74225 5304.324353 5152.452891 4629.999391 4138.869255 5167.720668 4251.435626 3658.815918 1.186162141 1.189546758 1.40393569 1.449737968 1.408229604 1.26543655 1.131204561 1.412402478 1.161970354 1 11.83716112 -6.997214004 24.47440734 1.208983978 1.331486171 0.225324758 0.126372922 126.1244409 1107961.206 0.046501283 0.040766179 1.01E-07 6.997214004 0.122502193 EPGGRS(ph)PAFVQLAPLSSK ddPTM_A459_MK2206_30min_R2 2 EPGGRSPAFVQLAPLSSK 18 1 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 EPGGRS(1)PAFVQLAPLSSK;EPGGRS(1)PAFVQLAPLSSK 108.28 0.00084174 16748300 35149 53320 47488 59166 71790 66099 63772 41764 62522 58013 TRUE FALSE 37840.03446 50672.20633 49071.22622 54331.94854 68971.16388 68614.44376 55398.6598 47222.6982 67960.05055 56120.04056 0.674269549 0.902925333 0.874397554 0.968138084 1.228993479 1.222637102 0.987145755 0.841458732 1.210976504 1 15.77622843 -5.250217481 1.140085336 1.07129069 0.681511307 0.484064524 0.125101255 0.808555464 1.470877254 0.04427477 0.311550384 5.62E-06 5.250217481 -0.389779383 EPGPIAPS(ph)TNSSPVLK ddPTM_A459_MK2206_30min_R2 1 EPGPIAPSTNSSPVLK 16 0 Q14674;Q14674-2 Q14674 ESPL1 Separin 1 EPGPIAPS(0.644)T(0.119)NS(0.119)S(0.119)PVLK 113.65 0.0022347 15188000 129670 125520 117830 119180 139860 131190 122380 98656 106040 127390 TRUE FALSE 139597.6349 119286.8593 121758.3934 109442.6128 134368.3937 136182.5274 106311.359 111550.6779 115263.1675 123233.2747 1.132791733 0.967976057 0.988031793 0.888093033 1.090358054 1.10507919 0.862683875 0.905199332 0.935325039 1 16.91103233 -7.271661151 24.99226583 0.917902008 1.020520389 0.305753767 0.074993211 955.9970413 2337406.295 0.032204123 0.022006472 5.35E-08 7.271661151 0.10261838 EPGPIAPSTNS(ph)SPVLK ddPTM_A459_MK2206_30min_R1 1 EPGPIAPSTNSSPVLK 16 0 Q14674;Q14674-2 Q14674 ESPL1 Separin 1 EPGPIAPS(0.11)T(0.11)NS(0.39)S(0.39)PVLK 119 0.0016662 0 1839.3 2178 1900.9 1444.3 1564.4 1455.5 1676.8 1612.5 1489.5 1484.7 TRUE FALSE 1682.857876 2036.211804 1771.872204 1555.540236 1502.086635 1537.909152 1564.943731 1598.402083 1644.338855 1668.635845 1.008523149 1.220285307 1.061868717 0.932222714 0.900188402 0.921656548 0.937858153 0.957909473 0.98543901 1 10.70445343 -5.637706664 4.185752825 0.942821097 1.120066482 0.60954063 0.055334031 0.123221908 3.846924877 0.014627076 0.026383645 2.30E-06 5.637706664 0.177245385 EPGPIAPSTNS(ph)SPVLK ddPTM_A459_MK2206_30min_R2 2 EPGPIAPSTNSSPVLK 16 0 Q14674;Q14674-2 Q14674 ESPL1 Separin 1 EPGPIAPS(0.047)T(0.047)NS(0.815)S(0.091)PVLK;EPGPIAPS(0.036)T(0.036)NS(0.651)S(0.278)PVLK 197.75 1.03E-06 14566000 116379 98798 103648 106927 113011 85628 124032 90571 102723 122188 TRUE FALSE 125289.0657 93891.83499 107103.5726 98190.72206 108573.6203 88886.63354 107746.4494 102408.9407 111657.6609 118201.0156 1.059966068 0.794340341 0.90611381 0.830709631 0.918550655 0.751995515 0.911552654 0.866396453 0.944642145 1 16.85088291 -8.476293275 2.615436865 0.999822666 0.874043761 0.191762171 0.078925564 0.384748154 5.852854202 0.070254297 0.019052959 3.34E-09 8.476293275 -0.125778905 EPGPIAPSTNSS(ph)PVLK ddPTM_A459_MK2206_30min_R1 1 EPGPIAPSTNSSPVLK 16 0 Q14674;Q14674-2 Q14674 ESPL1 Separin 1 EPGPIAPS(0.006)T(0.003)NS(0.229)S(0.761)PVLK 168.55 7.57E-06 0 2287.9 2139.6 1916.4 1697.7 1736.6 1546.5 2095.5 1761.7 1829.7 1611 TRUE FALSE 2093.302091 2000.311651 1786.320107 1828.457148 1667.427545 1634.061494 1955.713018 1746.297643 2019.903863 1810.582842 1.156148198 1.104788803 0.986599489 1.009872128 0.920934135 0.902505787 1.080156606 0.964494748 1.115609745 1 10.82223847 -5.128788127 2.955284929 0.992992601 1.151363153 0.437622715 0.061215767 0.248770151 3.994322841 0.016389233 0.061622659 7.43E-06 5.128788127 0.158370552 EPGS(ph)PPSVQR ddPTM_A459_MK2206_30min_R2 1 EPGSPPSVQR 10 0 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 EPGS(0.98)PPS(0.02)VQR 96.067 0.022094 25184000 131980 116260 100440 105520 107040 95785 128150 102090 94929 124490 TRUE FALSE 142084.4903 110486.6975 103788.6195 96898.67846 102837.0718 99430.16529 111323.7511 115433.5135 103185.7528 120427.9015 1.179830326 0.91745099 0.861832002 0.804619837 0.853930613 0.825640604 0.924401652 0.958527983 0.856825964 1 16.87781016 -4.761344863 3.765477785 0.879780977 1.217759633 0.700407495 0.057236552 0.153110109 3.766406265 0.014712395 0.149086723 1.73E-05 4.761344863 0.337978656 EPGSGGPQNLS(ph)GPGGR ddPTM_A459_MK2206_30min_R1 3 EPGSGGPQNLSGPGGR 16 0 Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70;M0QYR7;M0R2N0;M0QZC7 Q9H0W8-2 SMG9 Protein SMG9 1 EPGSGGPQNLS(1)GPGGR;EPGSGGPQNLS(1)GPGGR;EPGSGGPQNLS(1)GPGGR 134.82 0.00041956 22620400 2392.13 2071.2 2125.13 1838.37 2093.3 1821.49 2157.39 2039.28 1993.29 1586.99 TRUE FALSE 2188.666782 1936.364504 1980.882097 1979.961576 2009.919428 1924.62119 2013.474449 2021.45079 2200.499629 1783.598302 1.22710746 1.085650564 1.110609992 1.110093889 1.126890189 1.079066507 1.128883363 1.133355413 1.233741715 1 10.80057502 -4.751627487 24.87147022 1.116055446 1.227107699 0.280092072 0.055007269 511.0663984 1295370.113 0.013041503 0.169562677 1.77E-05 4.751627487 0.111052253 EPGSGGPQNLS(ph)GPGGR ddPTM_A459_MK2206_30min_R2 2 EPGSGGPQNLSGPGGR 16 0 Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70;M0QYR7;M0R2N0;M0QZC7 Q9H0W8-2 SMG9 Protein SMG9 1 EPGSGGPQNLS(1)GPGGR;EPGSGGPQNLS(1)GPGGR 156.29 8.48E-05 22338000 14791.4 15315.1 11901.9 11895 12221 12265.6 11188.7 10315.7 7983 10605.2 TRUE FALSE 15923.84096 14554.5744 12298.70341 10923.14045 11741.14213 12732.376 9719.61025 11663.99741 8677.34691 10259.15319 1.55215939 1.418691595 1.198802979 1.064721449 1.144455289 1.241074752 0.947408628 1.13693569 0.845815122 1 13.32462403 -1.522878746 0.37037954 0.995925843 8.834329909 0.76679219 0.097532117 31.17643758 0.430535085 0.076976761 173.9175 0.03 1.522878746 7.838404066 EPHLNYS(ph)PTCLEPPVLSIHPGAID ddPTM_A459_MK2206_30min_R1 1 EPHLNYSPTCLEPPVLSIHPGAID 24 0 O75054;O75054-2 O75054 IGSF3 Immunoglobulin superfamily member 3 1 EPHLNY(0.1)S(0.696)PT(0.204)CLEPPVLSIHPGAID 64.701 0.0020047 5358500 671.62 267.55 226.66 290.35 651.48 574.23 390.18 504.89 216.99 286.99 TRUE FALSE 614.4951922 250.1324464 211.2749507 312.7128073 625.5301721 606.7424064 364.1518041 500.4758 239.546887 322.5444879 1.905148639 0.775497507 0.655025767 0.969518374 1.939360912 1.881112309 1.128997139 1.551648901 0.742678595 1 8.333354352 EPHS(ph)PADQPEQQAESTLTSAETR ddPTM_A459_MK2206_30min_R1 1 EPHSPADQPEQQAESTLTSAETR 23 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 EPHS(1)PADQPEQQAESTLTSAETR 119.29 7.05E-06 5737100 1694.7 1491.5 1566.5 1228.5 1747.3 1775 2042 1414.5 1286 1685.7 TRUE FALSE 1550.556866 1394.403079 1460.170345 1323.119283 1677.701341 1875.498966 1905.781906 1402.133176 1419.684302 1894.537242 0.818435674 0.736012493 0.770726651 0.698386526 0.885546773 0.989950962 1.005935309 0.740092696 0.749356767 1 10.88762978 -6.284025746 19.49176417 0.892431668 0.755530403 0.352196045 0.092478863 62.0512294 53548.47487 0.031068437 0.035304838 5.20E-07 6.284025746 -0.136901265 EPHS(ph)PADQPEQQAESTLTSAETR ddPTM_A459_MK2206_30min_R2 2 EPHSPADQPEQQAESTLTSAETR 23 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 EPHS(1)PADQPEQQAESTLTSAETR;EPHS(1)PADQPEQQAESTLTSAETR 126.51 6.36E-06 23241000 43499 33153 32232 29797 32167 39186 36493 31400 24586 37737 TRUE FALSE 46829.31689 31506.67023 33306.59879 27362.48978 30903.96195 40677.25069 31701.42526 35504.08781 26724.44584 36505.64478 1.282796597 0.863062971 0.912368457 0.749541337 0.846552968 1.1142729 0.8683979 0.972564326 0.732063384 1 15.15583194 -4.758570709 24.99752543 0.895005315 1.28279712 0.535370513 0.108261165 62.32958819 543038.8234 0.026708907 0.180916104 1.74E-05 4.758570709 0.387791804 EPHSFQSR ddPTM_A459_MK2206_30min_R2 2 EPHSFQSR 8 0 F8VQQ3;Q9HB07;H3BPH3;F8VR84 F8VQQ3 C12orf10 "UPF0160 protein MYG1, mitochondrial" 0 ; 131.22 0.0050899 3752700 7281.8 11956.9 10546.4 16727.9 13027.9 14373.2 10929.4 10258.1 14421.2 10311 FALSE TRUE 7839.300207 11363.13773 10898.01171 15361.17706 12516.35919 14920.1822 9494.356651 11598.86889 15675.52991 9974.552914 0.785929983 1.139212738 1.092581473 1.54003665 1.254829093 1.495824658 0.951857866 1.162845993 1.571552133 1 13.28403646 -4.614868181 1.421880065 1.275867954 0.43617734 0.325622455 0.206747093 2.123632146 2.928555088 0.058528402 2.849189429 2.43E-05 4.614868181 -0.839690613 EPLATSQAQASSVEPGSR ddPTM_A459_MK2206_30min_R1 2 EPLATSQAQASSVEPGSR 18 0 Q8TCY5-3;Q8TCY5;Q8TCY5-1 Q8TCY5-3 MRAP Melanocortin-2 receptor accessory protein 0 ; 59.513 0.029673 14261000 4928.5 4873.4 4975.4 5179.4 5236 4963.1 5366.9 5080.5 4829.7 3692.7 FALSE TRUE 4509.305194 4556.140774 4637.68371 5578.318285 5027.439033 5244.106433 5008.883893 5036.081724 5331.764598 4150.179554 1.086532555 1.097817748 1.117465799 1.344114926 1.211378681 1.263585434 1.206907756 1.213461167 1.284706969 1 12.01895804 -5.552140768 24.35904226 1.228053099 1.096041773 0.286215872 0.084251075 157.6252411 131213.6315 0.021059799 0.036477444 2.80E-06 5.552140768 -0.132011325 EPLIPAS(ph)PK ddPTM_A459_MK2206_30min_R1 2 EPLIPASPK 9 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 EPLIPAS(1)PK;EPLIPAS(1)PK 102.4 0.016165 66417000 19513.3 22115 20608 17657.9 11329.2 9874.5 13888.6 13707.1 17050.3 15803.6 TRUE FALSE 17853.59137 20675.30948 19209.18638 19017.91452 10877.93397 10433.58566 12962.11684 13587.26027 18822.7397 17761.46928 1.005186625 1.164054007 1.081508859 1.070739938 0.612445615 0.587428072 0.729788546 0.764985152 1.059751274 1 14.11646331 -6.210387768 10.31976965 0.767332427 1.086772271 0.481225408 0.145024791 0.589688072 117.3773177 0.044203438 0.057040385 6.16E-07 6.210387768 0.319439844 EPLIPAS(ph)PK ddPTM_A459_MK2206_30min_R2 4 EPLIPASPK 9 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 EPLIPAS(1)PK;EPLIPAS(1)PK;EPLIPAS(1)PK;EPLIPAS(1)PK 101.71 0.016779 91068500 1001692 894859 864886 675579 705941 519668 788718 583402 564698 788794 TRUE FALSE 1078382.31 850421.6033 893720.8676 620382.0346 678222.2093 539444.3299 685158.3792 659654.6445 613814.4113 763055.7164 1.413241899 1.114494768 1.171239332 0.813023245 0.888823968 0.706952741 0.897913959 0.864490797 0.804416241 1 19.54142888 -5.23789797 1.090652976 0.839514798 1.434290264 0.761556373 0.09800826 0.408515423 0.658172309 0.031326066 0.235134371 5.78E-06 5.23789797 0.594775467 EPLLS(ph)SSENGNGGR ddPTM_A459_MK2206_30min_R1 2 EPLLSSSENGNGGR 14 0 M0QZR4;Q92888-2;Q92888;Q92888-3;M0QYC1;Q92888-4;M0R2C7 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 EPLLS(0.88)S(0.06)S(0.06)ENGNGGR;EPLLS(0.588)S(0.206)S(0.206)ENGNGGR 113.43 0.0032969 8982600 1229.05 1085.43 1080.46 785.85 952.06 1007.66 1203.43 1028.99 649.54 765.63 TRUE FALSE 1124.512844 1014.76831 1007.121386 846.3763032 914.1374342 1064.712838 1123.15138 1019.993649 717.0620074 860.4820246 1.306840598 1.179302159 1.170415368 0.983607186 1.062355062 1.23734466 1.305258388 1.185374732 0.833325958 1 9.749001245 -1.522885552 0.020893537 7.58E-07 2.600224466 0.21247163 0.129038479 5653.426276 9.133875176 416.1058873 770.8934095 0.02999953 1.522885552 2.600223707 EPLLS(ph)SSENGNGGR ddPTM_A459_MK2206_30min_R2 1 EPLLSSSENGNGGR 14 0 M0QZR4;Q92888-2;Q92888;Q92888-3;M0QYC1;Q92888-4;M0R2C7 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 EPLLS(0.888)S(0.056)S(0.056)ENGNGGR 132.23 0.00082512 4732100 5101.9 3768.6 4107.5 4912.5 6040.2 3362.6 4015.3 2267.6 2091.1 3551.6 TRUE FALSE 5492.505387 3581.456804 4244.442 4511.133036 5803.031398 3490.566099 3488.086287 2563.983106 2272.980098 3435.711583 1.598651474 1.04242068 1.235389496 1.313012727 1.689033337 1.015965984 1.015244209 0.746274256 0.661574769 1 11.74639322 -7.182759587 2.204050529 0.806109955 1.34194422 0.586405045 0.20277284 0.231265752 2.199310975 0.095783312 0.066083029 6.57E-08 7.182759587 0.535834265 EPLPPFENQDIHS(ph)ASA ddPTM_A459_MK2206_30min_R1 2 EPLPPFENQDIHSASA 16 0 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 EPLPPFENQDIHS(0.677)AS(0.323)A;EPLPPFENQDIHS(0.5)AS(0.5)A 178.47 1.11E-06 17271300 2220.86 2262.28 2258.23 1859.8 2399.75 2853.76 3428.91 4018.15 3558.18 3276.42 TRUE FALSE 2031.964195 2115.005161 2104.947639 2003.042118 2304.162876 3015.337425 3200.17367 3983.019738 3928.065544 3682.327645 0.551815153 0.574366369 0.571635075 0.543960861 0.625735431 0.818867226 0.869062718 1.081658158 1.066734393 1 11.84640228 -7.103163796 1.197245845 1.058285322 0.555790755 0.963222416 0.040564515 0.07857124 0.226146649 0.024509995 0.016089257 7.89E-08 7.103163796 -0.502494567 EPLPPFENQDIHS(ph)ASA ddPTM_A459_MK2206_30min_R2 1 EPLPPFENQDIHSASA 16 0 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 EPLPPFENQDIHS(0.673)AS(0.327)A 125.61 0.001191 2325200 4577.2 6729.2 5113.3 5681.7 6380.3 6918.5 9485.1 7638 8590.7 10108 TRUE FALSE 4927.633951 6395.037713 5283.77487 5217.486935 6129.777364 7181.788366 8239.694976 8636.312825 9337.903558 9778.176788 0.503941998 0.654011259 0.540364015 0.533584844 0.626883467 0.734471111 0.84266169 0.883223224 0.954973893 1 13.25534977 -7.2227284 0.943265454 0.975278541 0.554882563 0.94453577 0.040905757 0.12552867 0.21918336 0.031062651 0.018443154 5.99E-08 7.2227284 -0.420395977 EPLPPFENQDIHSAS(ph)A ddPTM_A459_MK2206_30min_R1 1 EPLPPFENQDIHSASA 16 0 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 EPLPPFENQDIHS(0.231)AS(0.769)A 161.94 4.30E-05 16687000 1100.2 1080.5 866.11 674.11 964.74 1008.8 1347.2 1329.2 1199.7 953.43 TRUE FALSE 1006.622213 1010.159254 807.3208663 726.030069 926.3123629 1065.917384 1257.330746 1317.578945 1324.413108 1071.548106 0.939409259 0.942710129 0.75341542 0.677552473 0.864461761 0.994745246 1.173377787 1.229603166 1.235981007 1 10.0654809 -7.007329791 2.354931755 1.180435333 0.826552277 0.714253383 0.096372317 0.164826335 1.832098954 0.043616209 0.03435761 9.83E-08 7.007329791 -0.353883056 EPPADVWT(ph)PPAR ddPTM_A459_MK2206_30min_R1 1 EPPADVWTPPAR 12 0 A0A3B3IUA7;Q14258 A0A3B3IUA7 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 1 EPPADVWT(1)PPAR 129.54 0.0053673 7210400 1279.2 1191.5 1098.1 935.01 1397.3 1040.7 942.24 957.06 1062.2 839.95 TRUE FALSE 1170.397323 1113.933133 1023.564031 1007.024632 1341.642582 1099.623535 879.3848888 948.6925253 1172.619491 944.0093473 1.239815396 1.180002228 1.084273195 1.066752819 1.421217476 1.164843905 0.931542565 1.004960945 1.242169365 1 9.882657335 -7.025168101 23.92717947 1.045526094 1.194663623 0.280251688 0.117263159 631.65831 600512.0683 0.046160258 0.035939423 9.44E-08 7.025168101 0.149137528 EPPADVWT(ph)PPAR ddPTM_A459_MK2206_30min_R2 1 EPPADVWTPPAR 12 0 A0A3B3IUA7;Q14258 A0A3B3IUA7 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 1 EPPADVWT(1)PPAR 156.52 0.0010198 3718000 14725 15892 10945 19000 9897.1 16541 13352 8510.4 8828.9 10032 TRUE FALSE 15852.35732 15102.82639 11309.90084 17447.63922 9508.490125 17170.47935 11598.86636 9622.738501 9596.821763 9704.656662 1.63347946 1.556245307 1.165409682 1.797862596 0.97978635 1.769303124 1.195185648 0.991558881 0.988888335 1 13.24446146 -7.505455943 5.711310392 1.007727982 1.466426465 0.464721738 0.237969251 0.151660275 17.15644117 0.10064019 0.062787328 3.12E-08 7.505455943 0.458698482 EPPS(ph)SPLQPQK ddPTM_A459_MK2206_30min_R1 1 EPPSSPLQPQK 11 0 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 EPPS(0.803)S(0.197)PLQPQK 182.41 3.66E-05 16099000 5106.3 4870.6 4225.6 2966.4 3084.2 3698.8 3910.7 3218.4 3831.9 4254.8 TRUE FALSE 4671.982371 4553.523055 3938.778045 3194.872642 2961.349783 3908.22286 3649.824338 3190.261868 4230.239718 4781.916746 0.977010395 0.952238045 0.823681853 0.668115488 0.619280916 0.817292117 0.763255517 0.667151278 0.884632657 1 12.2233733 -5.350739717 3.249600096 0.754884827 0.969640955 0.315764631 0.107407507 0.249482168 4.994399597 0.0280268 0.069533475 4.46E-06 5.350739717 0.214756128 EPPS(ph)SPLQPQK ddPTM_A459_MK2206_30min_R2 2 EPPSSPLQPQK 11 0 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 EPPS(0.5)S(0.5)PLQPQK;EPPS(0.657)S(0.343)PLQPQK 122.55 0.00412 32633000 174303 138710 126042 133522 101725 99607 136429 118108 93825 126450 TRUE FALSE 187647.7717 131821.8631 130244.1774 122612.8255 97730.76537 103397.6142 118515.7084 133545.1211 101985.7289 122323.9469 1.534023194 1.0776456 1.064747997 1.002361587 0.798950393 0.845276962 0.968867597 1.091733259 0.83373478 1 16.90034734 EPPSS(ph)PLQPQK ddPTM_A459_MK2206_30min_R1 3 EPPSSPLQPQK 11 0 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 EPPS(0.189)S(0.811)PLQPQK;EPPS(0.186)S(0.814)PLQPQK;EPPS(0.204)S(0.796)PLQPQK 157.03 0.00055491 38411700 16659 16827.1 15564.7 11852.5 13524.3 12352.7 15605.2 11413.3 14854.9 16189.7 TRUE FALSE 15242.06457 15731.65273 14508.21153 12765.3816 12985.59849 13052.0992 14564.20558 11313.51472 16399.12001 18195.40226 0.837687694 0.86459494 0.79735591 0.701571827 0.713674713 0.717329522 0.800433284 0.621778764 0.901278234 1 14.15128633 -8.505066014 8.972224866 0.999994039 0.75869172 0.583115757 0.068147105 0.165655118 76.45636466 0.069197794 0.017877712 3.13E-09 8.505066014 -0.241302319 EPPSS(ph)PLQPQK ddPTM_A459_MK2206_30min_R2 1 EPPSSPLQPQK 11 0 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 EPPS(0.194)S(0.806)PLQPQK 100.04 0.016662 50060000 166640 144420 138800 142750 123290 107440 151230 109040 87891 132480 TRUE FALSE 179398.0865 137248.3128 143427.5227 131086.8684 118449.0151 111528.7045 131373.3193 123291.9024 95535.60031 128157.1884 1.399828513 1.070937296 1.119153162 1.022860051 0.924247922 0.870249307 1.025095205 0.962036573 0.745456431 1 16.96755488 -1.522878751 0.525111707 0.914639602 18.18735777 0.735520147 0.084048478 61.80289916 0.611082099 0.043504632 1191.614434 0.03 1.522878751 17.27271817 EPRPNS(ph)SPSPSPGQASETPHPRPS ddPTM_A459_MK2206_30min_R1 1 EPRPNSSPSPSPGQASETPHPRPS 24 2 O00204-2;O00204 O00204-2 SULT2B1 Sulfotransferase family cytosolic 2B member 1 1 EPRPNS(0.485)S(0.485)PS(0.029)PSPGQASETPHPRPS 71.091 0.0014601 33284000 1488.3 937.32 1180.3 696.98 1922.6 2253 2053.7 1527.1 1098.5 905.01 TRUE FALSE 1361.71227 876.3002976 1100.184525 750.6615204 1846.018771 2380.562913 1916.70142 1513.748726 1212.693006 1017.129471 1.338779682 0.86154253 1.081656324 0.738019634 1.81492998 2.340471867 1.884422263 1.488255693 1.19227005 1 9.990287617 -6.268606456 24.98697698 1.693709989 1.000228092 0.375853968 0.38124641 555.8716232 1937962.945 0.122489701 0.14177596 5.39E-07 6.268606456 -0.693481896 EPRPNS(ph)SPSPSPGQASETPHPRPS ddPTM_A459_MK2206_30min_R2 1 EPRPNSSPSPSPGQASETPHPRPS 24 2 O00204-2;O00204 O00204-2 SULT2B1 Sulfotransferase family cytosolic 2B member 1 1 EPRPNS(0.697)S(0.263)PS(0.04)PS(0.001)PGQASETPHPRPS 64.013 0.0036374 2061800 3434.9 6181.7 4209.4 6118.5 6306.3 5173.5 5664.3 3902.2 6038.1 3344.6 TRUE FALSE 3697.878585 5874.725767 4349.739295 5618.598978 6058.682975 5370.381168 4920.570606 4412.230938 6563.283024 3235.465976 1.142919942 1.815727877 1.344393459 1.73656562 1.872584357 1.659847826 1.520822856 1.363708032 2.028543361 1 11.65975779 -10.91802197 4.397630759 0.998663405 1.610852648 0.33542672 0.25735083 178641128.3 4500.503015 2417767.04 0.059133289 1.21E-11 10.91802197 0.612189242 EPRPNSS(ph)PSPSPGQASETPHPRPS ddPTM_A459_MK2206_30min_R2 3 EPRPNSSPSPSPGQASETPHPRPS 24 2 O00204-2;O00204 O00204-2 SULT2B1 Sulfotransferase family cytosolic 2B member 1 1 EPRPNS(0.261)S(0.684)PS(0.054)PS(0.001)PGQASETPHPRPS;EPRPNS(0.254)S(0.408)PS(0.254)PS(0.084)PGQASETPHPRPS;EPRPNS(0.218)S(0.415)PS(0.263)PS(0.103)PGQASETPHPRPS 99.414 2.63E-06 102719100 23420.3 52514 45857.2 71331 70070 92476 66984.4 47619.1 68703 39992.3 TRUE FALSE 25213.37618 49906.23112 47386.05616 65503.02912 67318.69973 95995.23898 58189.26782 53843.07987 74678.66275 38687.35453 0.651721382 1.289988208 1.224846122 1.693137976 1.740069864 2.481307915 1.504090123 1.391748816 1.93031195 1 15.23957446 -4.884288463 1.037520259 1.718885358 0.312875632 0.397697561 0.375685551 1.583103314 1.553276255 0.124462592 2.382981969 1.31E-05 4.884288463 -1.406009726 EPRPNSSPS(ph)PSPGQASETPHPRPS ddPTM_A459_MK2206_30min_R1 2 EPRPNSSPSPSPGQASETPHPRPS 24 2 O00204-2;O00204 O00204-2 SULT2B1 Sulfotransferase family cytosolic 2B member 1 1 EPRPNS(0.074)S(0.074)PS(0.852)PS(0.001)PGQASETPHPRPS;EPRPNS(0.293)S(0.293)PS(0.405)PS(0.009)PGQASETPHPRPS 111.72 1.18E-07 87714000 4918.1 2407.4 3079.2 2233.7 5916.1 6253.6 6067.8 4160.9 2576.6 2852.4 TRUE FALSE 4499.789769 2250.677822 2870.192483 2405.739961 5680.449209 6607.673428 5663.028133 4124.52169 2844.44679 3205.776847 1.403650343 0.702069399 0.895318864 0.750438997 1.771941555 2.061176976 1.766507279 1.286590392 0.887287833 1 11.64645829 -6.256651945 24.99494475 1.521739341 0.917987205 0.304591317 0.381394379 480.9497888 2511011.483 0.121078794 0.151213226 5.54E-07 6.256651945 -0.603752135 EPRPNSSPS(ph)PSPGQASETPHPRPS ddPTM_A459_MK2206_30min_R2 2 EPRPNSSPSPSPGQASETPHPRPS 24 2 O00204-2;O00204 O00204-2 SULT2B1 Sulfotransferase family cytosolic 2B member 1 1 EPRPNS(0.057)S(0.057)PS(0.838)PS(0.048)PGQASETPHPRPS;EPRPNS(0.036)S(0.045)PS(0.841)PS(0.077)PGQASETPHPRPS 83.22 0.00013612 49365000 14491.8 32579 22798.3 54033 48347 58823 43972 26450 48964 33172 TRUE FALSE 15601.30335 30961.17423 23558.38394 49618.33106 46448.65386 61061.55048 38198.42358 29907.10582 53222.80021 32089.60036 0.486179422 0.964835146 0.734143887 1.546243347 1.447467508 1.902845464 1.190367694 0.931987481 1.658568496 1 14.9698182 -5.754189273 24.96859254 1.396046182 0.752030837 0.503879413 0.296943814 140.6405943 484345.5018 0.082489702 0.139193091 1.76E-06 5.754189273 -0.644015345 EPRPNSSPSPS(ph)PGQASETPHPRPS ddPTM_A459_MK2206_30min_R2 2 EPRPNSSPSPSPGQASETPHPRPS 24 2 O00204-2;O00204 O00204-2 SULT2B1 Sulfotransferase family cytosolic 2B member 1 1 EPRPNS(0.045)S(0.06)PS(0.23)PS(0.665)PGQASETPHPRPS;EPRPNS(0.002)S(0.003)PS(0.37)PS(0.625)PGQASETPHPRPS 113.71 7.80E-08 76629000 9634.3 27700 25600 41862 34136 44292 31175 21975 33293 21327 TRUE FALSE 10371.90942 26324.45828 26453.49122 38441.74069 32795.64912 45977.5631 27081.68505 24847.20795 36188.76496 20631.10174 0.502731727 1.275959889 1.282214181 1.863290734 1.589621802 2.228555881 1.312663056 1.204356814 1.754087853 1 14.33253325 -4.704622328 1.530580998 1.578043101 7.13E-11 0.453616145 0.338952601 1.208941692 2.329444265 0.096100371 3.059630182 1.97E-05 4.704622328 -1.578043101 EPS(ph)PALGPNLDGSGLLPR ddPTM_A459_MK2206_30min_R1 2 EPSPALGPNLDGSGLLPR 18 0 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 EPS(1)PALGPNLDGSGLLPR;EPS(1)PALGPNLDGSGLLPR 212.37 7.43E-12 39600000 757.33 889.08 1133.61 610.31 804.66 1103.69 1330 877.85 1480.98 1560.87 TRUE FALSE 692.9151066 831.2007304 1056.663712 657.3161819 772.6086883 1166.179974 1241.278127 870.17505 1634.933171 1754.24236 0.394993943 0.473823201 0.602347621 0.374700895 0.440423003 0.664777001 0.707586452 0.496040382 0.931988195 1 10.77663236 -8.195704822 0.528177918 1.019717872 0.450089762 0.721457852 0.109469079 0.469789822 0.325572734 0.116708178 0.062512387 6.37E-09 8.195704822 -0.569628111 down EPS(ph)PALGPNLDGSGLLPR ddPTM_A459_MK2206_30min_R2 4 EPSPALGPNLDGSGLLPR 18 0 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 EPS(1)PALGPNLDGSGLLPR;EPS(1)PALGPNLDGSGLLPR;EPS(1)PALGPNLDGSGLLPR;EPS(1)PALGPNLDGSGLLPR 207.16 1.83E-11 45650700 21344.4 22767.2 20928.4 18357.9 20611.9 21373.5 27895.1 22704.9 16599.1 26018 TRUE FALSE 22978.54368 21636.61395 21626.14241 16858.00085 19802.57324 22186.88352 24232.43986 25672.50839 18042.85971 25169.03479 0.912968807 0.859652114 0.859236065 0.669791312 0.78678318 0.881515072 0.962787809 1.020003691 0.716867368 1 14.61936227 -6.956813654 4.841775859 0.926370802 0.814750714 0.212842807 0.097423863 0.315665801 16.88343464 0.036260913 0.031252915 1.10E-07 6.956813654 -0.111620088 EPS(ph)PVRYDNLSR ddPTM_A459_MK2206_30min_R2 1 EPSPVRYDNLSR 12 1 Q9C0B5-2;Q9C0B5;Q9ULC8-2;Q9ULC8;Q9ULC8-3 Q9C0B5-2 ZDHHC5;ZDHHC8 Palmitoyltransferase ZDHHC5;Probable palmitoyltransferase ZDHHC8 1 EPS(0.863)PVRY(0.137)DNLSR 66.784 0.040839 12354000 22031 15918 17466 12906 13977 24372 28097 15323 27619 26918 TRUE FALSE 23717.7103 15127.53527 18048.30772 11851.53852 13428.19275 25299.49354 24407.83015 17325.76871 30021.2507 26039.66786 0.910829985 0.580941944 0.693108215 0.455134012 0.515682182 0.971575124 0.937332622 0.665360588 1.152904517 1 14.66842343 -6.768288119 24.99987324 0.924013277 0.62201517 0.487452479 0.160255195 148.157987 540815.899 0.055589009 0.050098385 1.70E-07 6.768288119 -0.301998106 EPS(ph)YFEIPTK ddPTM_A459_MK2206_30min_R1 2 EPSYFEIPTK 10 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2;J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 H0Y2V6;J3KQR7 CEP170;CEP170B Centrosomal protein of 170 kDa;Centrosomal protein of 170 kDa protein B 1 EPS(1)YFEIPTK;EPS(1)YFEIPTK 142.97 0.0011413 11234200 4169.5 4348.7 4446 3701.9 4382.8 3987.2 4669 4012.7 4866.2 4127.9 TRUE FALSE 3814.86213 4065.59884 4144.217907 3987.020979 4208.223795 4212.951818 4357.539529 3977.617387 5372.058904 4639.295416 0.822293428 0.876339719 0.893286057 0.859402263 0.907082524 0.908101649 0.939267526 0.857375319 1.15794715 1 12.17969 -8.252125414 24.99778447 1.078973578 0.885764168 0.736681881 0.046866318 274.8678017 737723.742 0.031006196 0.011375741 5.60E-09 8.252125414 -0.19320941 EPSAPSIPTPAY(ph)QSSPAGGHAPTPPTPAPR ddPTM_A459_MK2206_30min_R2 1 EPSAPSIPTPAYQSSPAGGHAPTPPTPAPR 30 0 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 1 EPSAPSIPT(0.019)PAY(0.634)QS(0.101)S(0.245)PAGGHAPTPPTPAPR 89.299 9.18E-06 49679000 26084 31205 32969 34323 33979 36826 34968 29728 29655 31355 TRUE FALSE 28081.0111 29655.40508 34068.17 31518.70111 32644.81373 38227.43924 30376.6596 33613.55167 32234.3383 30331.88892 0.925791703 0.977697273 1.123179967 1.03912754 1.0762539 1.260305263 1.001476027 1.108191836 1.062721098 1 14.88854772 -5.106793777 3.916079497 1.089063522 0.934651655 0.364287444 0.070817848 0.225203874 5.933746586 0.017933872 0.05763538 7.82E-06 5.106793777 -0.154411868 EPSAPSIPTPAYQS(ph)SPAGGHAPTPPTPAPR ddPTM_A459_MK2206_30min_R1 2 EPSAPSIPTPAYQSSPAGGHAPTPPTPAPR 30 0 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 1 EPSAPSIPT(0.001)PAY(0.037)QS(0.791)S(0.171)PAGGHAPTPPTPAPR;EPSAPSIPT(0.002)PAY(0.041)QS(0.783)S(0.174)PAGGHAPTPPTPAPR 113.53 7.47E-12 33425400 5724.1 4206.82 4488.34 3529.75 5215.1 4954.6 5073.23 4818 3639.36 3548.82 TRUE FALSE 5237.235237 3932.955253 4183.683986 3801.611957 5007.371524 5235.12517 4734.804083 4775.876734 4017.684496 3988.474614 1.313092283 0.986080052 1.048943366 0.953149343 1.255460297 1.312563242 1.187121529 1.197419364 1.007323572 1 11.96162138 -4.731817743 24.44019241 1.118713747 1.313093809 0.205993988 0.119801235 5236.042589 4319836.61 0.032220539 3.610933928 1.85E-05 4.731817743 0.194380062 EPSAPSIPTPAYQSS(ph)PAGGHAPTPPTPAPR ddPTM_A459_MK2206_30min_R1 2 EPSAPSIPTPAYQSSPAGGHAPTPPTPAPR 30 0 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 1 EPSAPS(0.001)IPT(0.02)PAY(0.234)QS(0.258)S(0.487)PAGGHAPTPPTPAPR;EPSAPSIPTPAYQS(0.291)S(0.709)PAGGHAPTPPTPAPR 128.82 5.30E-18 41161000 6000.8 3960.2 4848.5 3889.1 5536.5 4549.2 5741.7 4523 3735 4175.9 TRUE FALSE 5490.400449 3702.39026 4519.397329 4188.639156 5315.969481 4806.771773 5358.681669 4483.455888 4123.266616 4693.242018 1.169852402 0.78887691 0.962958507 0.892483094 1.13268599 1.024190049 1.141786775 0.955300381 0.878554014 1 12.19636914 -4.458334646 19.27546117 0.98231269 4.46013634 0.238423518 0.10366655 8015731.56 34649349.71 0.026791102 1153623819 3.48E-05 4.458334646 3.47782365 EPSAPSIPTPAYQSS(ph)PAGGHAPTPPTPAPR ddPTM_A459_MK2206_30min_R2 1 EPSAPSIPTPAYQSSPAGGHAPTPPTPAPR 30 0 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 1 EPSAPSIPTPAY(0.001)QS(0.346)S(0.652)PAGGHAPTPPTPAPR 102.19 1.67E-08 42238000 57173 73808 66711 80585 85453 80332 90327 65257 72808 61078 TRUE FALSE 61550.20884 70142.80205 68935.11144 74000.94772 82097.68585 83389.09055 78466.9564 73786.31396 79140.70823 59085.02986 1.041722565 1.18715015 1.166710275 1.252448343 1.389483699 1.411340415 1.328034471 1.248815718 1.33943756 1 15.85050503 -5.501530918 1.472829497 1.306115571 1.089725816 0.273199046 0.112627206 0.547601757 2.198633395 0.034088152 0.115632125 3.15E-06 5.501530918 -0.216389755 EPSAT(ph)PPISNLTK ddPTM_A459_MK2206_30min_R1 2 EPSATPPISNLTK 13 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 EPS(0.224)AT(0.776)PPISNLTK;EPS(0.002)AT(0.998)PPISNLTK 165.86 0.0008116 39074000 6702.1 6804.4 6123.8 5200.8 5588.7 5791.9 6267.8 5740.3 5814.1 5810.2 TRUE FALSE 6132.051201 6361.432323 5708.133518 5601.366517 5366.090245 6119.832373 5849.686498 5690.113162 6418.496501 6530.011441 0.939056732 0.974183948 0.874138364 0.857788163 0.821758169 0.937185551 0.895815658 0.871378743 0.982922704 1 12.6728698 -8.339020426 5.458329499 0.996525681 0.895903905 0.448517038 0.042217175 0.230270384 11.63675227 0.043767908 0.011484905 4.58E-09 8.339020426 -0.100621776 EPSAT(ph)PPISNLTK ddPTM_A459_MK2206_30min_R2 4 EPSATPPISNLTK 13 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 EPS(0.17)AT(0.823)PPIS(0.008)NLTK;EPS(0.012)AT(0.988)PPIS(0.001)NLTK;EPS(0.028)AT(0.972)PPISNLTK;EPS(0.368)AT(0.631)PPIS(0.001)NLTK 132.65 0.0032793 94249000 205784 209790 194121 219741 205124 199977 246223 184075 166586 230878 TRUE FALSE 221538.9813 199372.1337 200592.8973 201787.4574 197069.8011 207587.2649 213893.6243 208134.2345 181075.3492 223344.4698 0.991916126 0.892666534 0.898132367 0.903480877 0.882358096 0.929448869 0.957684892 0.931897865 0.810744718 1 17.76891101 EPSEVPT(ph)PK ddPTM_A459_MK2206_30min_R1 2 EPSEVPTPK 9 0 P17096;P17096-3;P17096-2 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 EPSEVPT(1)PK;EPS(0.019)EVPT(0.981)PK 124.42 0.012428 66042000 17889.3 18782.5 16515.5 12964.3 10063.2 11048.1 13127.6 11216.2 18172.8 19760.3 TRUE FALSE 16367.72109 17559.75584 15394.47387 13962.81263 9662.361435 11673.63387 12251.88176 11118.13795 20061.92759 22208.35515 0.737007355 0.790682413 0.693183884 0.628718901 0.435077761 0.525641534 0.551678937 0.500628609 0.903350449 1 14.43881492 -8.398472913 4.657647368 0.994254107 0.607861654 0.635564138 0.105070275 0.154392027 4.792248192 0.11625178 0.030385882 4.00E-09 8.398472913 -0.386392453 EPST(ph)ASGGGQLNR ddPTM_A459_MK2206_30min_R2 2 EPSTASGGGQLNR 13 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 EPS(0.04)T(0.707)AS(0.252)GGGQLNR;EPS(0.047)T(0.912)AS(0.04)GGGQLNR 123.1 0.0058921 19583800 21349.2 17205.6 14794.3 26518 17258.6 20644.4 18557.6 12772.7 13499.4 23613 TRUE FALSE 22983.71117 16351.19492 15287.53458 24351.39457 16580.94065 21430.03711 16120.96483 14442.13575 14673.55341 22842.50974 1.00618152 0.715823047 0.669258096 1.066056 0.725880861 0.938164735 0.705744028 0.632248203 0.642379212 1 14.47943355 -7.29165112 23.59129552 0.714446818 0.842777772 0.090463751 0.154632084 723.0451008 564596.409 0.062509779 0.042152751 5.11E-08 7.29165112 0.128330954 EPTPSIAS(ph)DISLPIATQELR ddPTM_A459_MK2206_30min_R1 3 EPTPSIASDISLPIATQELR 20 0 A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6 A0A499FIX8 ESYT2 Extended synaptotagmin-2 1 EPTPS(0.182)IAS(0.811)DIS(0.007)LPIATQELR;EPTPSIAS(0.797)DIS(0.203)LPIATQELR;EPTPSIAS(0.988)DIS(0.012)LPIATQELR 240.61 3.99E-30 12603000 1213.83 1316.95 952.75 904.72 1089.36 1198.87 1408.71 1210.4 1210.51 1061.47 TRUE FALSE 1110.587384 1231.216316 888.0799845 974.4016912 1045.968484 1266.748983 1314.737526 1199.8176 1336.346846 1192.972917 0.930940986 1.032057223 0.744425939 0.816784419 0.876774711 1.061842197 1.102068209 1.005737501 1.120182049 1 10.22034558 -6.761445635 23.93108779 1.06108101 0.877567601 0.567673396 0.077527379 0.082807259 292613.3406 0.027976808 0.026279547 1.73E-07 6.761445635 -0.183513409 EPTPSIAS(ph)DISLPIATQELR ddPTM_A459_MK2206_30min_R2 2 EPTPSIASDISLPIATQELR 20 0 A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6 A0A499FIX8 ESYT2 Extended synaptotagmin-2 1 EPTPS(0.001)IAS(0.998)DISLPIATQELR;EPTPSIAS(0.76)DIS(0.239)LPIATQELR 174.72 2.60E-10 14885300 21240.5 14778 17736.2 18482.4 17264.4 19352.8 22022.2 15031.3 19805.2 15802.2 TRUE FALSE 22866.68901 14044.14601 18327.51606 16972.3288 16586.51291 20089.28437 19130.65869 16995.94252 21527.8205 15286.57551 1.495867338 0.918724145 1.198928828 1.110276712 1.085037843 1.314178205 1.251467909 1.111821448 1.408282744 1 13.89997763 -6.749796525 24.99734852 1.226283781 1.147468587 0.021211592 0.169535836 770.0436525 1653289.043 0.052648251 0.052236101 1.78E-07 6.749796525 -0.078815194 EPTPSIASDIS(ph)LPIATQELR ddPTM_A459_MK2206_30min_R1 1 EPTPSIASDISLPIATQELR 20 0 A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6 A0A499FIX8 ESYT2 Extended synaptotagmin-2 1 EPTPS(0.001)IAS(0.096)DIS(0.903)LPIATQELR 201.67 1.46E-24 0 413.22 303.75 374.96 149.8 583.22 613.72 471.09 201.08 446 342.26 TRUE FALSE 378.0734691 283.9758198 349.5087599 161.337622 559.9891124 648.468296 439.6644457 199.3219788 492.363296 384.6617527 0.982872527 0.73824813 0.908613236 0.419427252 1.455796186 1.685814333 1.142989763 0.518174675 1.279990258 1 8.587446578 -6.267938743 24.99404097 1.179763711 0.771024628 0.295005826 0.316575301 761.6245245 2928909.147 0.105707046 0.122684239 5.40E-07 6.267938743 -0.408739083 EPTPSIASDIS(ph)LPIATQELR ddPTM_A459_MK2206_30min_R2 1 EPTPSIASDISLPIATQELR 20 0 A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6 A0A499FIX8 ESYT2 Extended synaptotagmin-2 1 EPTPS(0.005)IAS(0.082)DIS(0.912)LPIATQELR 114.9 0.0010165 0 2324.5 2498.1 907.96 2170.4 3010.8 2564.5 2935.4 609.5 3284 2531.3 TRUE FALSE 2502.465507 2374.047987 938.2309332 1993.071377 2892.580864 2662.093845 2549.978454 689.1637427 3569.636384 2448.703888 1.021955133 0.969512074 0.383154099 0.81392911 1.181270172 1.087144043 1.041358437 0.281440213 1.457765637 1 11.25780261 -6.0261862 23.68604692 0.979639926 0.774204987 0.090079709 0.32015128 1033.828153 935121.9456 0.094712296 0.12279843 9.41E-07 6.0261862 -0.205434939 EPVAES(ph)PK ddPTM_A459_MK2206_30min_R1 3 EPVAESPK 8 0 A0A0G2JNN3;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 A0A0G2JNN3 LENG8 Leukocyte receptor cluster member 8 1 EPVAES(1)PK;EPVAES(1)PK;EPVAES(1)PK 132.25 0.0033622 119189000 21422.8 30417.6 30416.2 26193.7 14969.7 13545.2 17837.6 18133.3 18698.2 23752.3 TRUE FALSE 19600.67836 28437.40871 28351.63309 28211.14331 14373.42515 14312.11752 16647.68625 17974.76247 20641.9448 26694.91424 0.734247662 1.065274398 1.062061216 1.056798424 0.538433089 0.536136486 0.623627636 0.673340334 0.773253835 1 14.70427729 -6.255041578 24.99152585 0.663373928 0.991605777 0.448640313 0.154836602 423.8215907 1655559.522 0.045579102 0.057393398 5.56E-07 6.255041578 0.328231849 EPVAES(ph)PK ddPTM_A459_MK2206_30min_R2 4 EPVAESPK 8 0 A0A0G2JNN3;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 A0A0G2JNN3 LENG8 Leukocyte receptor cluster member 8 1 EPVAES(1)PK;EPVAES(1)PK;EPVAES(1)PK;EPVAES(1)PK 119.27 0.0079577 155409000 1425100 1291050 1394630 1036050 1159650 728861 1440890 1022300 909270 1492680 TRUE FALSE 1534206.752 1226938.334 1441126.268 951401.4008 1114116.314 756598.3161 1251699.412 1155918.12 988356.661 1443973.974 1.0624892 0.849695602 0.998027869 0.658877111 0.7715626 0.523969497 0.866843471 0.800511741 0.684469858 1 20.46161331 -5.753780627 24.99695794 0.745066253 0.958033404 0.356071192 0.129548885 184.2007674 601195.595 0.033850126 0.057241365 1.76E-06 5.753780627 0.212967151 EPVFPSS(ph)TK ddPTM_A459_MK2206_30min_R2 1 EPVFPSSTK 9 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 EPVFPS(0.045)S(0.934)T(0.021)K 91.701 0.031253 0 23029 28041 27246 26469 30461 22339 29650 19493 19882 28976 TRUE FALSE 24792.11795 26648.52472 28154.36804 24306.39803 29264.94809 23189.1263 25756.91938 22040.80203 21611.30042 28030.51549 0.884468855 0.950696919 1.00441849 0.8671406 1.044038883 0.827281478 0.918888537 0.786314545 0.770991901 1 14.77471066 -6.794097301 24.99493653 0.850976988 0.94858607 0.242631816 0.078062495 255.5856009 195612.2323 0.026470728 0.023346602 1.61E-07 6.794097301 0.097609082 EPVS(ph)PMELTGPEDGAASSGAGR ddPTM_A459_MK2206_30min_R1 1 EPVSPMELTGPEDGAASSGAGR 22 0 K7EQ54;A0A0C4DFL8;F5GX28;O94953 K7EQ54 KDM4B Lysine-specific demethylase 4B 1 EPVS(1)PMELTGPEDGAASSGAGR 169.43 7.70E-12 4403100 836.9 845.35 669.7 493.04 848.44 571.35 618.13 618.06 649.91 664.49 TRUE FALSE 765.7172603 790.3175614 624.2426299 531.0140262 814.6448382 603.6993432 576.8956755 612.6563666 717.4704702 746.8120378 1.025314566 1.058254984 0.835876497 0.711041064 1.090829816 0.808368522 0.77247774 0.8203622 0.960710907 1 9.544601372 -5.259079811 24.96292385 0.864359983 1.041784792 0.27104242 0.108325452 239.1441804 2529970.249 0.027657429 0.066422368 5.51E-06 5.259079811 0.177424809 EPVS(ph)PMELTGPEDGAASSGAGR ddPTM_A459_MK2206_30min_R2 2 EPVSPMELTGPEDGAASSGAGR 22 0 K7EQ54;A0A0C4DFL8;F5GX28;O94953 K7EQ54 KDM4B Lysine-specific demethylase 4B 1 EPVS(0.999)PMELT(0.001)GPEDGAASSGAGR;EPVS(1)PMELTGPEDGAASSGAGR 171.13 5.51E-12 7234300 13140.6 14971.7 15270.6 18293.3 15302.9 16737.1 12067.7 12187.5 8804 10195.6 TRUE FALSE 14146.65444 14228.22715 15779.71418 16798.67887 14702.03126 17374.04207 10483.19649 13780.4481 9569.756006 9862.918407 1.434327433 1.442598079 1.599903145 1.703215841 1.490637015 1.76155184 1.062889914 1.39719782 0.970276303 1 13.26779888 -7.627550324 1.334997319 1.042799036 1.565948389 0.629715085 0.16443911 0.298378773 0.995609695 0.123998609 0.053057288 2.36E-08 7.627550324 0.523149353 EPYGHLGPAELLEAS(ph)PAAR ddPTM_A459_MK2206_30min_R1 3 EPYGHLGPAELLEASPAAR 19 0 Q9H6W3 Q9H6W3 NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 1 EPYGHLGPAELLEAS(1)PAAR;EPYGHLGPAELLEAS(1)PAAR;EPYGHLGPAELLEAS(1)PAAR 170.27 2.49E-09 12363800 6186.9 5898 5636.2 4707.2 6231.6 4980.5 6270.7 5425.6 4948.82 4892.09 TRUE FALSE 5660.671666 5514.039128 5253.630447 5069.74936 5983.382176 5262.491606 5852.393045 5378.164551 5463.267549 5498.159043 1.029557643 1.002888255 0.955525369 0.922081249 1.088251928 0.957137028 1.064427747 0.978175515 0.993653968 1 12.42473292 -6.237892098 24.99846792 1.012233964 0.977755099 0.134174228 0.044835678 1782.089533 1891918.214 0.013093495 0.016892691 5.78E-07 6.237892098 -0.034478865 EPYGHLGPAELLEAS(ph)PAAR ddPTM_A459_MK2206_30min_R2 2 EPYGHLGPAELLEASPAAR 19 0 Q9H6W3 Q9H6W3 NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 1 EPYGHLGPAELLEAS(1)PAAR;EPY(0.016)GHLGPAELLEAS(0.984)PAAR 176.7 5.55E-13 5503200 56503 56605 56658 59237 56212 52857 56095 38759 46403 62889 TRUE FALSE 60828.91312 53794.07801 58546.94944 54397.14761 54004.83444 54868.51017 48729.65912 43824.93438 50439.04906 60836.93708 0.999868107 0.884233832 0.962358597 0.894146718 0.887698116 0.901894684 0.800988042 0.720367206 0.829085938 1 15.8926599 -7.151850947 3.744391971 0.81446606 0.921599831 0.215710633 0.074081715 0.294568201 7.437288524 0.02875163 0.021705287 7.05E-08 7.151850947 0.107133771 EQAPDIS(ph)PK ddPTM_A459_MK2206_30min_R1 1 EQAPDISPK 9 0 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 EQAPDIS(1)PK 101.72 0.016773 12224000 6916.7 9943.2 8082.1 7205.9 4798 4623.9 4721.5 5183.9 7335.2 6058.6 TRUE FALSE 6328.398344 9295.895873 7533.50957 7760.899667 4606.8855 4885.701222 4406.53735 5138.577709 8097.720289 6809.185108 0.929391439 1.365199466 1.106374618 1.13976923 0.676569285 0.717516288 0.647146065 0.754653843 1.189234859 1 12.73326644 -6.24572821 23.15949573 0.803733875 1.149555707 0.393447289 0.182920539 289.4006592 426597.7663 0.054072099 0.069494632 5.68E-07 6.24572821 0.345821832 EQCCYNCGKPGHLAR ddPTM_A459_MK2206_30min_R1 2 EQCCYNCGKPGHLAR 15 1 P62633-2;P62633;P62633-7;P62633-3;P62633-5;P62633-6;P62633-8;P62633-4 P62633-2;P62633-8 CNBP Cellular nucleic acid-binding protein 0 ; 89.231 0.013388 20137900 8049.8 7979.9 8118.9 7369.6 7974.3 7719.6 8260.4 7597.2 6401.8 7279.5 FALSE TRUE 7365.122239 7460.40706 7567.811689 7937.207869 7656.666745 8156.677081 7709.363788 7530.778481 7067.290019 8181.339417 0.900234285 0.911880889 0.925008889 0.970159954 0.935869587 0.996985538 0.942310714 0.920482344 0.863830439 1 12.99812134 -5.438258895 3.347714977 0.945323731 0.906112382 0.163455252 0.037094204 0.487850466 10.33485981 0.010390389 0.023585356 3.65E-06 5.438258895 -0.039211348 EQDNSESPNGRT(ph)SPLVSQNNEQGSTLR ddPTM_A459_MK2206_30min_R1 1 EQDNSESPNGRTSPLVSQNNEQGSTLR 27 1 A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 EQDNS(0.011)ES(0.344)PNGRT(0.586)S(0.058)PLVS(0.001)QNNEQGSTLR 105.82 3.13E-09 6544800 770.01 571.83 752.35 881.98 876.76 679.59 579.64 783.26 345.14 127.55 TRUE FALSE 704.516606 534.6037631 701.2825782 949.9102524 841.8367926 718.0677985 540.9732732 776.4120404 381.0185381 143.351857 4.914596999 3.72931174 4.89203693 6.626424468 5.872521016 5.009127986 3.77374444 5.416128238 2.657925375 1 7.163416783 -8.462995986 2.909187872 1.007986437 5.025953375 0.71974009 0.828152043 0.13577328 2.458760565 0.871746252 0.234080395 3.44E-09 8.462995986 4.017966938 EQDNSESPNGRT(ph)SPLVSQNNEQGSTLR ddPTM_A459_MK2206_30min_R2 1 EQDNSESPNGRTSPLVSQNNEQGSTLR 27 1 A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 EQDNS(0.031)ES(0.334)PNGRT(0.455)S(0.175)PLVS(0.005)QNNEQGSTLR 64.707 0.0019019 6350800 1625.5 8491.1 6677.7 6989 8119.8 13048 7551.6 5344.9 9806.3 5109.7 TRUE FALSE 1749.94953 8069.444321 6900.331185 6417.976343 7800.975853 13544.55078 6560.065849 6043.496782 10659.23425 4942.970907 0.354027884 1.632508965 1.39598863 1.298404636 1.578195785 2.74016397 1.327150406 1.222644619 2.156442845 1 12.2711627 -4.76090185 24.99999535 1.613032816 0.354026458 0.372988851 0.482011627 14.19282938 659495.3698 0.120113074 0.691028807 1.73E-05 4.76090185 -1.259006358 EQDRVHS(ph)PCPTSGSEK ddPTM_A459_MK2206_30min_R1 3 EQDRVHSPCPTSGSEK 16 1 X6RLP6;Q96LT9-2;Q96LT9 X6RLP6 RNPC3 RNA-binding protein 40 1 EQDRVHS(0.998)PCPT(0.002)SGSEK;EQDRVHS(0.992)PCPT(0.005)S(0.002)GS(0.001)EK;EQDRVHS(0.961)PCPT(0.019)S(0.019)GS(0.001)EK 94.564 0.0050398 16542500 4728.5 5231.9 5378.5 4555.2 6066.5 4966.5 5974.5 5760.4 4562.9 3874.6 TRUE FALSE 4326.316245 4891.302359 5013.422405 4906.042293 5824.858459 5247.698938 5575.952006 5710.03743 5037.229783 4354.6147 0.993501502 1.123245728 1.151289552 1.126630628 1.337628897 1.205089153 1.28046966 1.311261231 1.156756712 1 12.08832936 -4.742295407 0.874512029 1.22741846 0.866133603 0.29961185 0.09398303 2.641023216 1.496665637 0.032267998 0.936173368 1.81E-05 4.742295407 -0.361284858 EQDRVHS(ph)PCPTSGSEK ddPTM_A459_MK2206_30min_R2 2 EQDRVHSPCPTSGSEK 16 1 X6RLP6;Q96LT9-2;Q96LT9 X6RLP6 RNPC3 RNA-binding protein 40 1 EQDRVHS(0.903)PCPT(0.058)S(0.024)GS(0.014)EK;EQDRVHS(0.994)PCPT(0.005)S(0.001)GSEK 66.448 0.029183 12090900 17464.8 29591 24312.4 29317 31818 31546 31104 22645.6 23788 26114 TRUE FALSE 18801.91852 28121.55397 25122.96328 26921.70732 30568.66545 32746.50514 27020.00744 25605.45767 25857.03724 25261.90232 0.744279599 1.113200171 0.994500056 1.06570388 1.210069814 1.296280253 1.06959512 1.013599742 1.023558595 1 14.62467566 -4.759534102 24.99999973 1.09403976 0.744279158 0.55011704 0.092909422 41.33836757 542273.8312 0.02541267 0.160087484 1.74E-05 4.759534102 -0.349760602 EQDVVTGVS(ph)PLLFR ddPTM_A459_MK2206_30min_R1 4 EQDVVTGVSPLLFR 14 0 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 EQDVVT(0.014)GVS(0.986)PLLFR;EQDVVT(0.007)GVS(0.993)PLLFR;EQDVVT(0.002)GVS(0.998)PLLFR;EQDVVT(0.003)GVS(0.997)PLLFR 174.35 8.75E-05 70024400 10099.3 9609.7 9549.6 7930.6 10992.2 8907.8 11046.6 10552.7 9140.9 9531 TRUE FALSE 9240.301501 8984.106783 8901.399759 8541.416186 10554.3574 9412.151938 10309.70147 10460.43886 10091.12927 10711.77224 0.862630506 0.838713388 0.830992254 0.797385904 0.985304501 0.878673643 0.96246459 0.976536714 0.942059731 1 13.38690957 -6.262229674 24.99776353 0.952639626 0.832776555 0.761063755 0.034267611 36.07791881 1141181.13 0.010373291 0.012478477 5.47E-07 6.262229674 -0.119863071 EQDVVTGVS(ph)PLLFR ddPTM_A459_MK2206_30min_R2 3 EQDVVTGVSPLLFR 14 0 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 EQDVVT(0.283)GVS(0.717)PLLFR;EQDVVT(0.031)GVS(0.969)PLLFR;EQDVVT(0.431)GVS(0.569)PLLFR 119.04 0.0022701 18964300 18698.9 20352.7 21420.9 26986 26821.5 23902.9 26745.4 20212.7 22992.1 25704.4 TRUE FALSE 20130.50216 19342.01451 22135.06211 24781.15748 25768.35314 24812.54161 23233.69685 22854.56929 24991.9113 24865.66753 0.809570149 0.777860256 0.890185718 0.996601336 1.036302489 0.997863483 0.934368515 0.919121486 1.005077031 1 14.60186754 -5.511534122 3.112482747 0.981186811 0.795027029 0.836390024 0.033793985 0.103643087 2.040834262 0.010592111 0.022799965 3.08E-06 5.511534122 -0.186159782 EQFDTLT(ph)PEPPVDPNQEVPPGPPR ddPTM_A459_MK2206_30min_R1 1 EQFDTLTPEPPVDPNQEVPPGPPR 24 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 EQFDT(0.137)LT(0.863)PEPPVDPNQEVPPGPPR 87.868 0.00010986 6366000 1057.5 852.59 848.81 708.41 1240.8 1130.9 1362.1 1232.4 931.1 1036.3 TRUE FALSE 967.5540718 797.086236 791.1951421 762.9718609 1191.376309 1194.930581 1271.236794 1221.625257 1027.891177 1164.684668 0.830743375 0.684379436 0.679321334 0.655088783 1.022917483 1.025969186 1.091485816 1.048889275 0.882548904 1 10.18572369 -6.266971792 24.99243608 1.019088826 0.708021392 0.82870991 0.066666417 174.3365857 787556.7547 0.020918475 0.024382943 5.41E-07 6.266971792 -0.311067434 EQFDTLT(ph)PEPPVDPNQEVPPGPPR ddPTM_A459_MK2206_30min_R2 1 EQFDTLTPEPPVDPNQEVPPGPPR 24 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 EQFDT(0.183)LT(0.817)PEPPVDPNQEVPPGPPR 111.95 3.94E-07 4031200 7012.6 8558 7297.8 11014 7170 13561 11865 9895 10992 13343 TRUE FALSE 7549.490048 8133.022164 7541.10501 10114.12097 6888.469774 14077.07336 10307.11125 11188.31047 11948.06429 12907.619 0.584886341 0.630094688 0.584236722 0.783577588 0.533674706 1.090601865 0.798529244 0.86679894 0.925659821 1 13.65593528 -6.752276952 24.99999551 0.919381122 0.630406603 0.72940834 0.094998872 108.1982461 295222.1827 0.030653032 0.030242703 1.77E-07 6.752276952 -0.288974519 EQFEGLGS(ph)TPDAK ddPTM_A459_MK2206_30min_R1 1 EQFEGLGSTPDAK 13 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 EQFEGLGS(0.5)T(0.5)PDAK 196.8 0.00018212 17258000 5821.5 6996.9 5984.7 4981.1 4867.2 4911.3 5182.3 4748.6 5536.4 4681.8 TRUE FALSE 5326.350855 6541.400538 5578.475238 5364.745185 4673.329118 5189.373562 4836.598223 4707.083491 6111.928592 5261.81673 1.012264609 1.243182892 1.060180452 1.019561391 0.888158854 0.98623229 0.919187891 0.89457382 1.161562423 1 12.36134528 -5.713640922 2.768705993 0.967778643 1.130429294 0.293946499 0.09062434 0.278826174 4.337678617 0.025188059 0.046664794 1.93E-06 5.713640922 0.162650651 EQFEGLGS(ph)TPDAK ddPTM_A459_MK2206_30min_R2 1 EQFEGLGSTPDAK 13 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 EQFEGLGS(0.5)T(0.5)PDAK 188 0.00014515 9971900 90887 109870 97944 105540 97913 76355 118280 95681 81821 104460 TRUE FALSE 97845.3786 104414.0156 101209.4041 96917.04439 94068.44365 79260.74303 102749.6939 108186.8352 88937.64268 101051.4788 0.968272605 1.033275483 1.00156282 0.95908586 0.93089626 0.784360051 1.016805446 1.070611104 0.88012213 1 16.62473091 -5.816222015 3.945276184 0.94603777 1.004897713 0.093133414 0.07504558 0.550063855 17.4159834 0.022764296 0.036461112 1.53E-06 5.816222015 0.058859943 EQFEGLGST(ph)PDAK ddPTM_A459_MK2206_30min_R1 1 EQFEGLGSTPDAK 13 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 EQFEGLGS(0.086)T(0.914)PDAK 200.63 0.00025748 13811000 4186.5 4832.1 4159.7 3845.5 3955.7 3463.5 4101.6 3366.5 4072.1 3743.3 TRUE FALSE 3830.416191 4517.529412 3877.351154 4141.681076 3798.136093 3659.600377 3827.989748 3337.067045 4495.409367 4207.048264 0.910475932 1.073800234 0.921632201 0.984462458 0.902803071 0.869873637 0.909899176 0.793208643 1.06854238 1 12.03859265 -6.261861744 24.50609186 0.910298107 0.976181781 0.063959695 0.080857246 59.26859348 3438809.886 0.023270128 0.028020631 5.47E-07 6.261861744 0.065883674 EQFEGLGST(ph)PDAK ddPTM_A459_MK2206_30min_R2 3 EQFEGLGSTPDAK 13 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 EQFEGLGS(0.035)T(0.965)PDAK;EQFEGLGS(0.008)T(0.992)PDAK;EQFEGLGS(0.006)T(0.994)PDAK 164.66 0.00084808 21082400 161876 178334 166660 188840 194399 165575 217572 163729 140544 207294 TRUE FALSE 174269.351 169478.1929 172216.3612 173411.1679 186765.9185 171876.0726 189004.535 185128.9425 152768.2631 200530.0138 0.869043729 0.845151255 0.858805911 0.864764155 0.931361421 0.857108966 0.942524919 0.923198174 0.761822434 1 17.61345866 -6.068672916 9.482332654 0.898554553 0.857293392 0.113257434 0.058829844 1.158286725 154.4794549 0.016696992 0.021604528 8.54E-07 6.068672916 -0.041261161 EQFLDGDGWTSR ddPTM_A459_MK2206_30min_R1 2 EQFLDGDGWTSR 12 0 P27797;K7EJB9 P27797 CALR Calreticulin 0 ; 199.8 0.0014537 89332000 6453.9 4647.77 4785.2 4289.1 6584.6 6519.3 5865.2 5277.6 3839.72 3635 FALSE TRUE 5904.961914 4345.199328 4460.393956 4619.447225 6322.321439 6888.417132 5473.94321 5231.4585 4238.872635 4085.331243 1.445405908 1.06361004 1.091807173 1.130739945 1.547566418 1.686134299 1.339901928 1.280546959 1.037583584 1 11.99623734 -8.254646983 3.333779204 1.000569335 1.323866768 0.297977423 0.188482569 0.357687599 7.850739146 0.191280195 0.055863048 5.56E-09 8.254646983 0.323297433 EQGDGAEDEEWDD ddPTM_A459_MK2206_30min_R1 2 EQGDGAEDEEWDD 13 0 H0YMP5;Q7Z6K5 H0YMP5 ARPIN Arpin 0 ; 123.51 0.033778 10505700 7188.9 6676.6 7958.5 6324.9 7623.1 7169.3 7266.5 7369.9 6583.2 6018.5 FALSE TRUE 6577.446305 6241.952126 7418.299194 6812.044894 7319.455785 7575.21957 6781.765043 7305.465741 7267.547198 6764.117217 0.972402768 0.92280366 1.096713578 1.007085577 1.082100672 1.119912522 1.002609036 1.080032398 1.074426561 1 12.72368595 -5.257745933 24.98992578 1.060013616 0.947603207 0.533733651 0.041181823 219.579175 1485659.128 0.010138571 0.024771113 5.52E-06 5.257745933 -0.112410409 EQGLTLPLYQS(ph)PVKELDKFK ddPTM_A459_MK2206_30min_R2 1 EQGLTLPLYQSPVKELDKFK 20 2 P51587 P51587 BRCA2 Breast cancer type 2 susceptibility protein 1 EQGLT(0.002)LPLY(0.082)QS(0.916)PVKELDKFK 77.899 0.0019975 2694400 36429 44086 40928 38977 40176 30848 51134 31987 33087 38782 TRUE FALSE 39218.03225 41896.75335 42292.51909 35792.45442 38598.48837 32021.94226 44420.04438 36167.81073 35964.84745 37516.54652 1.045352941 1.116753999 1.127303097 0.954044488 1.028839058 0.853541843 1.184012083 0.964049575 0.958639608 1 15.19523941 -5.757657909 24.9965952 0.99415927 1.098498423 0.261273588 0.080510261 132.6053368 876543.1836 0.02165874 0.035754132 1.75E-06 5.757657909 0.104339153 EQGS(ph)LDAER ddPTM_A459_MK2206_30min_R2 1 EQGSLDAER 9 0 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 EQGS(1)LDAER 74.464 0.040712 1280200 7189.7 2117.9 4569.4 3053.7 4028.1 3246.2 2801.4 14998 4410.3 7490.8 TRUE FALSE 7740.14896 2012.728166 4721.741515 2804.202942 3869.936554 3369.736416 2433.572815 16958.2901 4793.899922 7246.375809 1.068140704 0.277756525 0.651600419 0.386980059 0.534051318 0.46502369 0.335833095 2.340244357 0.661558281 1 12.82304391 -7.707974605 24.99997339 1.375699094 0.518213332 0.400752931 0.448675645 77.11264338 36057.43687 0.19240675 0.111085944 1.96E-08 7.707974605 -0.857485763 EQHNVS(ph)PR ddPTM_A459_MK2206_30min_R2 1 EQHNVSPR 8 0 C9JAN6;P50443 C9JAN6 SLC26A2 Sulfate transporter 1 EQHNVS(1)PR 83.314 0.02593 2438100 26790 5696.4 9683.3 8608.2 11663 10372 16902 28085 35607 18995 TRUE FALSE 28841.063 5413.525059 10006.13639 7904.882524 11205.05202 10766.71373 14682.7471 31755.80593 38704.0325 18375.19471 1.569565028 0.294610487 0.54454587 0.43019313 0.609792288 0.585937396 0.7990526 1.728188813 2.106319586 1 14.16547192 -7.715074552 4.737562899 1.694662379 0.641997744 0.508948715 0.41227601 0.138726432 6.727859229 0.201626848 0.108065349 1.93E-08 7.715074552 -1.052664635 EQIS(ph)DIDDAVR ddPTM_A459_MK2206_30min_R1 3 EQISDIDDAVR 11 0 P53999 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 1 EQIS(1)DIDDAVR;EQIS(1)DIDDAVR;EQIS(1)DIDDAVR 121.92 0.0043007 16384400 6023.8 6427.6 7059 5913 6173.9 5549.2 6058.1 6426 5824.3 5216.8 TRUE FALSE 5511.444178 6009.162072 6579.854748 6368.420285 5927.98049 5863.390908 5653.975203 6369.818159 6429.756827 5863.096569 0.940022753 1.024912689 1.122249083 1.086187173 1.011066494 1.000050202 0.964332608 1.086425592 1.096648631 1 12.5174471 -4.796663311 4.29983762 1.046180496 0.933752355 0.29473494 0.048810053 0.269013167 9.790811643 0.013317874 0.087590419 1.60E-05 4.796663311 -0.112428141 EQIS(ph)DIDDAVR ddPTM_A459_MK2206_30min_R2 2 EQISDIDDAVR 11 0 P53999 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 1 EQIS(1)DIDDAVR;EQIS(1)DIDDAVR 148.85 0.00064154 37888000 95951 108599 92030 95036 104781 98968 103429 97067 95818 97103 TRUE FALSE 103297.0823 103206.1316 95098.23427 87271.25479 100666.7715 102734.2966 89848.64806 109753.9902 104152.0764 93934.53706 1.099670958 1.098702722 1.012388385 0.929064618 1.071669426 1.093679703 0.956502804 1.168409337 1.108772978 1 16.51936807 -7.770689804 24.99971484 1.103943328 1.038097715 0.114842055 0.067728128 387.8929702 1048281.308 0.036954615 0.018134073 1.70E-08 7.770689804 -0.065845613 EQISDIDDAVR ddPTM_A459_MK2206_30min_R1 2 EQISDIDDAVR 11 0 P53999 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 0 ; 182.92 0.00046762 17556100 6745.7 6588.2 7114.7 6616.4 8294.3 6677.1 6828.2 6617.9 5901.5 5313.3 FALSE TRUE 6171.942792 6159.306983 6631.773987 7125.996274 7963.920468 7055.151632 6372.703237 6560.040398 6514.982044 5971.551717 1.033557622 1.031441621 1.110561258 1.193324049 1.333643389 1.181460358 1.067177099 1.098548704 1.091003202 1 12.54389015 -8.440694436 1.039473886 1.005702474 1.143066814 0.193541608 0.084405789 0.995551395 2.355081617 0.092288429 0.030601796 3.62E-09 8.440694436 0.13736434 EQISDIDDAVR ddPTM_A459_MK2206_30min_R2 4 EQISDIDDAVR 11 0 P53999 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 0 ;;; 218.55 0.00021495 44200200 131419 170279 147903 183761 167554 190179 188055 138496 159522 160523 FALSE TRUE 141480.5397 161823.1925 152834.0122 168747.1385 160974.9881 197416.3951 163363.1526 156597.9027 173396.9352 155285.1477 0.911101556 1.042103478 0.984215261 1.08669207 1.03664124 1.271315371 1.052020461 1.008453835 1.116635672 1 17.24456032 -4.286369259 0.784463033 1.086057766 0.6783486 0.288046207 0.07680197 6.777975554 1.854029287 0.029265156 2.894643405 5.17E-05 4.286369259 -0.407709165 EQISS(ph)EPEDFAQPGDVYSQR ddPTM_A459_MK2206_30min_R2 2 EQISSEPEDFAQPGDVYSQR 20 0 Q9C0G0-3;Q9C0G0-2;Q9C0G0 Q9C0G0-3 ZNF407 Zinc finger protein 407 1 EQIS(0.054)S(0.946)EPEDFAQPGDVYSQR;EQIS(0.105)S(0.895)EPEDFAQPGDVYSQR 199.97 1.07E-15 5554500 27307.7 26537 27228 30168 26482 31229 32014 25274.9 21534.4 27902.6 TRUE FALSE 29398.39851 25219.21117 28135.76793 27703.1779 25442.18362 32417.44148 27810.52334 28578.41621 23407.42319 26992.14045 1.089146619 0.934316833 1.042368907 1.026342389 0.942577476 1.200995584 1.030319303 1.058768061 0.867194035 1 14.72025177 -8.244994283 24.88613514 0.933597008 1.03838087 0.238132104 0.07647777 964.2757131 1459231.081 0.050924646 0.019125568 5.69E-09 8.244994283 0.104783862 EQIVPKPEEEVAQK ddPTM_A459_MK2206_30min_R2 2 EQIVPKPEEEVAQK 14 1 A0A087WXM6;J3QQT2;J3KRX5;A0A0A6YYL6;P18621;P18621-3;J3QLC8;A0A0A0MRF8;P18621-2 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 0 ; 146.77 0.0013848 8946300 51198 59872 56486 52524 56187 37474 66146 52261 41535 54366 FALSE TRUE 55117.75824 56898.84354 58369.21505 48232.62118 53980.81606 38900.09933 57460.95074 59091.69214 45147.63922 52592.04187 1.048024687 1.081890748 1.109848809 0.917108739 1.026406546 0.739657521 1.092578814 1.123586194 0.858450017 1 15.68255689 -5.754422557 24.9989492 0.968983022 1.080118364 0.1956623 0.106232439 288.141868 1026556.05 0.029456167 0.049650264 1.76E-06 5.754422557 0.111135342 EQIVVDLSHPGVSEDDQVS(ph)R ddPTM_A459_MK2206_30min_R1 1 EQIVVDLSHPGVSEDDQVSR 20 0 O60701;O60701-2;O60701-3 O60701 UGDH UDP-glucose 6-dehydrogenase 1 EQIVVDLSHPGVS(0.321)EDDQVS(0.679)R 78.653 0.0031786 5333000 890.03 983.97 685.19 740.73 1134.6 893.68 924.19 572.78 950.06 674.15 TRUE FALSE 814.3282748 919.9133742 638.6812118 797.7811529 1089.406479 944.2793893 862.5389714 567.7722448 1048.822137 757.6687916 1.074781334 1.214136552 0.842955681 1.052941815 1.437839979 1.246295743 1.13841164 0.749367337 1.384275225 1 9.565423514 -11.00680018 3.007568566 0.996667218 1.120734254 0.032820268 0.204106312 87163538.49 119690515.8 2522978.743 0.050726477 9.84E-12 11.00680018 0.124067035 EQIVVDLSHPGVSEDDQVSR ddPTM_A459_MK2206_30min_R1 1 EQIVVDLSHPGVSEDDQVSR 20 0 O60701;O60701-2;O60701-3 O60701 UGDH UDP-glucose 6-dehydrogenase 0 139.44 0.00010717 29751000 2358 2308.6 2377.3 1716.3 2679.9 2157.5 2586.2 2131.7 1821.4 1728.2 FALSE TRUE 2157.439718 2158.30972 2215.9355 1848.489723 2573.153908 2279.655786 2413.679317 2113.062772 2010.741048 1942.302463 1.110764033 1.111211957 1.140880754 0.951700242 1.324795678 1.173687327 1.242689726 1.087916435 1.035235802 1 10.92355217 -8.12857028 3.28510386 1.015591327 1.149454302 0.250663658 0.091352707 0.38147559 7.278226666 0.07513901 0.024647763 7.44E-09 8.12857028 0.133862974 EQIVVDLSHPGVSEDDQVSR ddPTM_A459_MK2206_30min_R2 2 EQIVVDLSHPGVSEDDQVSR 20 0 O60701;O60701-2;O60701-3 O60701 UGDH UDP-glucose 6-dehydrogenase 0 ; 146.68 3.30E-05 31694000 60446 71055 60849 84364 70060 87716 86502 65383 60210 64397 FALSE TRUE 65073.79224 67526.51202 62877.67529 77471.19133 67309.09238 91054.09385 75144.18349 73928.78259 65446.95697 62295.73116 1.044594726 1.083966923 1.009341637 1.243603532 1.080476802 1.46164259 1.206249322 1.186739143 1.05058494 1 15.92684569 -5.758868227 24.99981327 1.192624872 1.049767663 0.18347348 0.121604744 103.2910118 1004293.441 0.03336629 0.054539554 1.74E-06 5.758868227 -0.142857209 EQLDT(ph)SNESAEPK ddPTM_A459_MK2206_30min_R2 1 EQLDTSNESAEPK 13 0 Q96DX7 Q96DX7 TRIM44 Tripartite motif-containing protein 44 1 EQLDT(0.868)S(0.104)NES(0.028)AEPK 124.47 0.0052698 4051200 34482 32782 28279 29095 33906 27386 38871 27355 24986 34024 TRUE FALSE 37121.96843 31154.09355 29221.80775 26717.84543 32574.68008 28428.19342 33767.19101 30930.39242 27159.23712 32913.79967 1.127854238 0.946535917 0.88782845 0.811752083 0.989696735 0.863716548 1.025928071 0.939739341 0.825162618 1 15.00640496 -4.76865611 3.803838711 0.916459263 1.152152815 0.450183937 0.069133666 0.237458334 6.091797357 0.017079679 0.160579367 1.70E-05 4.76865611 0.235693552 EQLEEEEEAKHNLEK ddPTM_A459_MK2206_30min_R1 1 EQLEEEEEAKHNLEK 15 1 P35579 P35579 MYH9 Myosin-9 0 95.822 0.0084193 32705000 7625.2 8188.8 8117.1 7945.9 7773.6 6909.6 7009.9 8007.7 6385.1 5675.9 FALSE TRUE 6976.636698 7655.707632 7566.133868 8557.894595 7463.961051 7300.815581 6542.282361 7937.689523 7048.853994 6379.073343 1.093675574 1.200128486 1.186086671 1.341557642 1.170069797 1.144494692 1.025585067 1.244332695 1.104996543 1 12.63913115 -6.747671507 3.391509959 1.112058894 1.20794267 0.245920587 0.083746033 0.380595804 9.168356016 0.030196887 0.028387657 1.79E-07 6.747671507 0.095883776 EQLEEEEEAKHNLEK ddPTM_A459_MK2206_30min_R2 2 EQLEEEEEAKHNLEK 15 1 P35579 P35579 MYH9 Myosin-9 0 ; 115.83 0.0018547 25359000 121332 138581 121557 122939 147970 89659 128145 100512 111767 126895 FALSE TRUE 130621.2712 131699.2691 125609.6497 112894.4904 142159.9543 93071.03607 111319.4076 113649.2635 121488.2916 122754.4265 1.064086037 1.07286778 1.023259635 0.919677551 1.158084139 0.758188838 0.906846382 0.925826194 0.989685627 1 16.90541552 -6.751774813 24.99992279 0.910894592 1.040540547 0.386382468 0.082479513 221.1331154 572017.7142 0.027247526 0.026912277 1.77E-07 6.751774813 0.129645954 EQLQLLEEQHR ddPTM_A459_MK2206_30min_R1 2 EQLQLLEEQHR 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 140.01 0.0015761 13089800 30778 21119.6 20767.7 26155 22626 26610 21856.9 19842.2 17018.8 15297.9 FALSE TRUE 28160.16948 19744.7102 19358.04639 28169.46263 21724.75851 28116.6352 20398.86608 19668.72174 18787.96516 17193.11935 1.637874368 1.148407674 1.125918223 1.638414884 1.263572832 1.635342292 1.186455213 1.143987972 1.092760702 1 14.0695437 -7.498582027 16.10636258 1.104060712 1.389448728 0.397304342 0.184420026 9.90868701 6569.654583 0.077993124 0.051739408 3.17E-08 7.498582027 0.285388016 EQLQPHENGEGNS(ph)ET ddPTM_A459_MK2206_30min_R1 2 EQLQPHENGEGNSET 15 0 P06756-3;P06756-2;P06756 P06756-3 ITGAV Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain 1 EQLQPHENGEGNS(0.5)ET(0.5);EQLQPHENGEGNS(0.5)ET(0.5) 176.42 1.93E-05 16408600 9118.6 8568.8 6119.9 5956 9488.2 9983.1 12127.7 9789.9 12211.9 11546.3 TRUE FALSE 8343.015186 8010.969563 5704.498239 6414.732152 9110.264902 10548.33449 11318.68326 9704.307936 13481.37071 12976.74281 0.642920593 0.617332845 0.439593997 0.49432529 0.702045577 0.812864572 0.872228372 0.747823092 1.0388871 1 13.66364069 -6.676337686 1.883252987 0.892710903 0.546136342 0.757516238 0.092936666 0.17729889 1.29364606 0.03773241 0.036734626 2.11E-07 6.676337686 -0.34657456 EQLQPHENGEGNS(ph)ET ddPTM_A459_MK2206_30min_R2 2 EQLQPHENGEGNSET 15 0 P06756-3;P06756-2;P06756 P06756-3 ITGAV Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain 1 EQLQPHENGEGNS(0.5)ET(0.5);EQLQPHENGEGNS(0.584)ET(0.416) 125.96 0.0011841 32181000 80061 44202 53954 53703 46465 68361 93458 41832 82496 66275 TRUE FALSE 86190.53172 42006.99296 55752.79943 49315.29311 44640.55063 70962.52576 81186.85234 47299.58603 89671.35296 64112.45218 1.344364921 0.655208022 0.86960953 0.76919992 0.696285185 1.106844667 1.266319562 0.73775974 1.398657358 1 15.96831697 -6.784659533 24.7647996 1.095801584 0.849890014 0.192769515 0.238996362 338.7935345 361327.8844 0.080391934 0.070943877 1.64E-07 6.784659533 -0.24591157 EQLRQEQALLEEIER ddPTM_A459_MK2206_30min_R1 2 EQLRQEQALLEEIER 15 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 196.67 8.66E-05 6523800 1444.9 1539.65 1909.04 1948.04 1833.11 1639.75 1668.03 1593.15 1499.07 1012.11 FALSE TRUE 1322.003668 1439.418505 1779.459684 2098.078378 1760.093347 1732.591228 1556.758762 1579.221258 1654.903691 1137.497828 1.162203246 1.265425278 1.564363149 1.844468031 1.547337765 1.523160032 1.368581745 1.388329031 1.454863166 1 10.15164808 -9.523348647 0.703358292 0.98200472 1.481800471 0.377273084 0.176247502 5.822855052 3.124013113 0.493519961 0.071899845 3.00E-10 9.523348647 0.49979575 EQLVDQGIMPPLKS(ph)PAAFHEQIK ddPTM_A459_MK2206_30min_R2 1 EQLVDQGIMPPLKSPAAFHEQIK 23 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2S3;Q9ULH7-2;Q9ULH7-3 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2;Phosphatase and actin regulator 1 EQLVDQGIMPPLKS(1)PAAFHEQIK 95.255 4.35E-05 2790200 21259 19063 18597 15798 12443 8721.2 11337 8705.7 7873.9 6924.8 TRUE FALSE 22886.60539 18116.35914 19217.0147 14507.25286 11954.4253 9053.091377 9848.438282 9843.564881 8558.757589 6698.844343 3.41650055 2.704400672 2.868705961 2.165635164 1.784550392 1.351440773 1.470169745 1.469442247 1.277646882 1 12.70969651 -5.810178389 0.670986526 1.231677948 3.50718243 0.946390515 0.176510263 0.237745511 0.185510172 0.098431645 0.345594476 1.55E-06 5.810178389 2.275504482 up EQMIDLQNLLTTQS(ph)PSVK ddPTM_A459_MK2206_30min_R2 2 EQMIDLQNLLTTQSPSVK 18 0 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 EQMIDLQNLLTTQS(1)PSVK;EQMIDLQNLLTTQS(1)PSVK 246.48 9.57E-33 9435600 44283 41876 36812 37377 38162 34004 46618 30413 29502 40596 TRUE FALSE 47673.34053 39796.49873 38039.29371 34323.17954 36663.56813 35298.04605 40497.0006 34388.08352 32068.03063 39271.35584 1.213946896 1.013372161 0.968626952 0.87400037 0.933595679 0.898824227 1.031209637 0.875653075 0.816575592 1 15.26118979 -4.526216624 1.336865902 0.918469632 1.506178658 0.686837389 0.059628424 1.339685997 1.377075356 0.017427595 1.259781811 2.98E-05 4.526216624 0.587709026 EQMMNSSISSGS(ph)GSLR ddPTM_A459_MK2206_30min_R2 1 EQMMNSSISSGSGSLR 16 0 A0A590UK48;Q12959;Q12959-3;Q12959-5;Q12959-8;A0A590UJ64;Q12959-7;A0A590UKA8;A0A590UJC5;A0A590UJR5;A0A590UJ81;A0A590UJ18;A0A590UJ68;A0A590UJS9;A0A590UJX2;C9JUA9;A0A590UJ29;A0A590UK81;A0A590UJR4;E7EQD7;A0A590UK02;A0A590UK70;A0A590UJL2;A0A590UJ25;Q12959-9;Q12959-6;A0A590UJ08;A0A0C4DFT3;A0A590UJD9;Q12959-4;Q12959-2 A0A590UK48;A0A590UJ08 DLG1 Disks large homolog 1 1 EQMMNSSIS(0.007)S(0.443)GS(0.522)GS(0.028)LR 91.14 0.044817 2796400 16171 39276 26205 49944 41838 80321 26628 27282 55340 17398 TRUE FALSE 17409.06419 37325.61095 27078.66162 45863.41544 40195.2299 83377.67194 23131.71161 30847.85107 60153.37317 16830.30468 1.03438794 2.217762046 1.608922841 2.725049623 2.388265136 4.954020352 1.374408369 1.832875379 3.574110766 1 14.03877367 -5.760527776 24.99299568 2.628989983 1.680097866 0.128454266 1.0926421 49.76680452 1364346.035 0.299426895 0.482573046 1.74E-06 5.760527776 -0.948892117 EQMRKY(ph)KVK ddPTM_A459_MK2206_30min_R2 1 EQMRKYKVK 9 3 M0R300;M0R0P8;Q13459-2;Q13459;M0R240;M0QXP0;M0R332 M0R300 MYO9B Unconventional myosin-IXb 1 EQMRKY(1)KVK 55.676 0.041442 0 0 560.53 821.23 897.22 598.82 758.71 715.43 620.4 507.85 449.83 TRUE FALSE 0 532.6948953 848.6093983 823.9142559 575.307318 787.5832407 621.4931816 701.4884102 552.021875 435.1520839 0 1.224157978 1.950144397 1.893393796 1.322083334 1.80990341 1.428220626 1.612053432 1.268572289 1 8.765375895 -4.828860745 3.915290059 1.569191538 2.81E-16 0.717839107 0.286545897 0.111131846 2.934689502 0.069438063 0.445243521 1.48E-05 4.828860745 -1.569191538 EQNSALPTS(ph)SQDEELMEVVEK ddPTM_A459_MK2206_30min_R2 2 EQNSALPTSSQDEELMEVVEK 21 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EQNS(0.002)ALPT(0.18)S(0.752)S(0.066)QDEELMEVVEK;EQNS(0.004)ALPT(0.186)S(0.623)S(0.186)QDEELMEVVEK 88.09 0.00060071 3983700 25832.4 30173.8 30682.7 35246.2 30243.2 27623.2 34743.5 24864.3 29536.7 34692.7 TRUE FALSE 27810.14841 28675.41297 31705.6459 32366.47271 29055.70001 28674.42023 30181.63672 28114.14938 32105.74878 33560.68004 0.828652708 0.854434801 0.944725967 0.964416474 0.865766128 0.854405221 0.89931541 0.837710957 0.956647742 1 15.03448433 -8.478411009 5.243963415 0.999763664 0.884640742 0.47274879 0.042123153 0.162603556 10.58017346 0.043578854 0.011325936 3.32E-09 8.478411009 -0.115122921 EQNSALPTSS(ph)QDEELMEVVEK ddPTM_A459_MK2206_30min_R1 2 EQNSALPTSSQDEELMEVVEK 21 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EQNS(0.001)ALPT(0.012)S(0.059)S(0.928)QDEELMEVVEK;EQNSALPT(0.008)S(0.048)S(0.944)QDEELMEVVEK 179.71 2.01E-14 17349400 10219.5 10856.3 10551.3 8938.1 9716.5 9201.6 11196.3 10021.5 10070.3 9610.7 TRUE FALSE 9350.27786 10149.5529 9835.107154 9626.514011 9329.47123 9722.58664 10449.41526 9933.883082 11117.14372 10801.34607 0.865658576 0.939656301 0.910544583 0.89123281 0.863732276 0.900127315 0.967417874 0.919689362 1.029236879 1 13.39892349 -7.877895035 1.165997959 1.01067603 0.897147922 0.669028645 0.030243817 0.30000271 0.735314061 0.026782874 0.009887436 1.32E-08 7.877895035 -0.113528108 EQNSALPTSS(ph)QDEELMEVVEK ddPTM_A459_MK2206_30min_R2 1 EQNSALPTSSQDEELMEVVEK 21 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EQNS(0.001)ALPT(0.022)S(0.121)S(0.856)QDEELMEVVEK 67.864 0.026942 0 9107.7 11230 9399.2 12392 9261.3 10797 11603 8955.4 8594.4 13126 TRUE FALSE 9804.992515 10672.33453 9712.564637 11379.53396 8897.654828 11207.8874 10079.51216 10125.90153 9341.925377 12697.69969 0.772186518 0.840493537 0.764907414 0.896188619 0.700729663 0.882670694 0.793806154 0.797459522 0.735717933 1 13.63227954 -11.64173377 2.495480006 1.394296397 0.800845169 0.519745147 0.058134591 12012539.8 3422087.402 26855601.96 0.013245134 2.28E-12 11.64173377 -0.593451227 EQPEMEDANS(ph)EK ddPTM_A459_MK2206_30min_R2 2 EQPEMEDANSEK 12 0 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 EQPEMEDANS(1)EK;EQPEMEDANS(1)EK 164.15 0.00043286 16379400 99542 115687 91469 110621 86308 89675 112495 100958 83956 108123 TRUE FALSE 107163.0121 109942.1518 94518.53081 101582.9104 82919.11426 93087.64496 97724.27137 114153.5572 91258.34112 104594.9554 1.024552395 1.05112289 0.903662423 0.971202771 0.792763991 0.889982166 0.934311517 1.091386835 0.872492758 1 16.67445375 -5.257057965 24.64111553 0.930251951 1.037837655 0.237651404 0.075791432 438.4705781 2465934.626 0.020145718 0.049597264 5.53E-06 5.257057965 0.107585704 EQPGEEYS(ph)EEEESVLK ddPTM_A459_MK2206_30min_R2 1 EQPGEEYSEEEESVLK 16 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 EQPGEEYS(0.999)EEEES(0.001)VLK 104.16 0.0066299 0 14228 12327 14556 12029 11412 8866.5 14528 12660 13244 18331 TRUE FALSE 15317.30662 11714.85911 15041.28978 11046.19222 10963.90754 9203.920871 12620.45615 14314.70547 14395.93918 17732.86097 0.863780901 0.660629953 0.848215626 0.622922169 0.618281932 0.51903192 0.711698816 0.807241736 0.811822706 1 14.1141377 -8.460457461 1.263512231 0.992090366 0.687482945 0.460452 0.100810649 0.42129109 1.466054088 0.100386266 0.031135183 3.46E-09 8.460457461 -0.304607421 EQPGEEYSEEEES(ph)VLK ddPTM_A459_MK2206_30min_R1 1 EQPGEEYSEEEESVLK 16 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 EQPGEEYS(0.234)EEEES(0.766)VLK 184.22 1.04E-13 0 1007.9 905.89 1004.9 1046.3 820.7 855.59 874.77 1009.9 982.89 668.54 TRUE FALSE 922.1728123 846.9163963 936.6901878 1126.886207 788.0097811 904.0327664 816.4156894 1001.070551 1085.064933 751.3637824 1.227331998 1.127172238 1.246653365 1.499787764 1.048772645 1.203189171 1.086578444 1.332338042 1.444127277 1 9.553367766 -11.67920092 2.561866033 0.394057649 1.240951308 0.220513821 0.138557424 11989721.24 3627077.346 43350670.47 0.03642158 2.09E-12 11.67920092 0.846893659 EQPPAETPTDAAVLT(ph)SPPAPAPPVTPSKPMAGTTDREEATR ddPTM_A459_MK2206_30min_R2 1 EQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATR 41 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EQPPAETPT(0.002)DAAVLT(0.471)S(0.471)PPAPAPPVT(0.018)PS(0.02)KPMAGT(0.008)T(0.009)DREEAT(0.002)R 43.562 0.012729 6945500 5324.4 8459 8717.8 10443 10498 10039 12297 9321 10857 10441 TRUE FALSE 5732.040158 8038.938361 9008.447101 9589.773494 10085.79577 10421.04118 10682.38913 10539.2867 11801.32224 10100.31103 0.567511252 0.795909981 0.89189799 0.949453286 0.99856289 1.031754483 1.057629721 1.0434616 1.168411765 1 13.3021121 -4.342100077 0.577415303 1.070289798 5.93E-17 0.925104374 0.043528303 1.446071369 0.253354128 0.021550305 1.154576297 4.55E-05 4.342100077 -1.070289798 EQPPAETPTDAAVLTS(ph)PPAPAPPVTPSKPMAGTTDREEATR ddPTM_A459_MK2206_30min_R2 1 EQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATR 41 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EQPPAETPT(0.001)DAAVLT(0.282)S(0.589)PPAPAPPVT(0.018)PS(0.034)KPMAGT(0.034)T(0.029)DREEAT(0.011)R 43.476 0.0041997 8625300 6395.8 12771 10151 10553 12117 14617 13094 11285 11288 13104 TRUE FALSE 6885.467366 12136.81071 10489.42927 9690.786143 11641.2257 15173.26018 11374.74207 12759.98825 12269.80984 12676.41755 0.543171392 0.957432229 0.827475841 0.764473567 0.918337192 1.196967528 0.897315194 1.006592611 0.967924083 1 13.62985947 -6.472275026 5.241182719 1.012116727 0.793713077 0.472199585 0.118960942 0.198130783 12.28654792 0.03690065 0.041009141 3.37E-07 6.472275026 -0.21840365 EQPPAETPTDAAVLTSPPAPAPPVT(ph)PSKPMAGTTDREEATR ddPTM_A459_MK2206_30min_R1 1 EQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATR 41 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EQPPAETPTDAAVLTS(0.001)PPAPAPPVT(0.909)PS(0.075)KPMAGT(0.005)T(0.005)DREEAT(0.005)R 71.904 8.35E-08 8736500 1141.4 1116.6 1020.6 761.72 1056.8 1189.4 760.94 684.83 773.96 665.59 TRUE FALSE 1044.317936 1043.909137 951.3245156 820.3878064 1014.705418 1256.7428 710.179081 678.8426035 854.4159116 748.0483141 1.396056801 1.395510313 1.271742075 1.096704305 1.35647043 1.680028918 0.949375953 0.907484972 1.142193486 1 9.546987642 -7.299660127 24.99769062 0.9920539 1.350453067 0.598477923 0.146604432 427.0087252 279276.8236 0.064753524 0.043657876 5.02E-08 7.299660127 0.358399167 EQPPAETPTDAAVLTSPPAPAPPVT(ph)PSKPMAGTTDREEATR ddPTM_A459_MK2206_30min_R2 2 EQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATR 41 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EQPPAETPTDAAVLT(0.006)S(0.006)PPAPAPPVT(0.924)PS(0.049)KPMAGT(0.007)T(0.007)DREEATR;EQPPAETPTDAAVLT(0.003)S(0.003)PPAPAPPVT(0.671)PS(0.19)KPMAGT(0.057)T(0.039)DREEAT(0.039)R 61.374 3.51E-05 17619000 33102 36856 38306 37284 46976 39182 48199 35023 34234 41301 TRUE FALSE 35636.31457 35025.78463 39583.10292 34237.77793 45131.4862 40673.09847 41870.4134 39600.62635 37211.61144 39953.35175 0.89194806 0.87666699 0.990732972 0.856943822 1.129604507 1.018014677 1.047982499 0.991171569 0.931376463 1 15.28602892 -6.241717006 24.99625492 1.020580905 0.908305393 0.495476774 0.05708798 744.9294623 944128.208 0.017030301 0.021957466 5.73E-07 6.241717006 -0.112275512 EQQAS(ph)GQQK ddPTM_A459_MK2206_30min_R1 1 EQQASGQQK 9 0 P38935 P38935 IGHMBP2 DNA-binding protein SMUBP-2 1 EQQAS(1)GQQK 85.265 0.0354 8502100 2601.5 1385.8 1673.9 2775.1 1717.9 2102.7 1661.1 1542.8 993.4 1022.3 TRUE FALSE 2380.228764 1295.584168 1560.280332 2988.838683 1649.472405 2221.753057 1550.29105 1529.311462 1096.667485 1148.950242 2.071655218 1.127624262 1.358005138 2.601364771 1.435634325 1.933724347 1.349310869 1.331051082 0.954495195 1 10.1661006 -7.767389229 1.522292186 0.990579133 1.731540551 0.368989869 0.396151013 0.482353868 2.091044581 0.319729569 0.124142335 1.71E-08 7.767389229 0.740961418 EQQEAIEHIDEVQNEIDR ddPTM_A459_MK2206_30min_R1 1 EQQEAIEHIDEVQNEIDR 18 0 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105 Q01105-2;Q01105 SET;SETSIP Protein SET;Protein SETSIP 0 189.84 3.13E-10 5884200 2574.4 2752.6 2388.4 1821.9 2464.1 2542.9 3330.3 2349.8 3262.5 4797.7 FALSE TRUE 2355.433761 2573.40524 2226.282062 1962.223054 2365.949679 2686.8768 3108.141763 2329.255946 3601.64855 5392.075297 0.436832505 0.477256918 0.412880373 0.363908689 0.43878276 0.498301053 0.576427737 0.431977637 0.667952199 1 12.39662493 -9.138559823 0.547326168 1.029304005 0.426204431 0.902120417 0.055419319 0.643731917 0.313532638 0.095210133 0.026438687 7.27E-10 9.138559823 -0.603099574 down EQQEAIEHIDEVQNEIDR ddPTM_A459_MK2206_30min_R2 2 EQQEAIEHIDEVQNEIDR 18 0 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105 Q01105-2;Q01105 SET;SETSIP Protein SET;Protein SETSIP 0 ; 122.13 0.0012874 10062300 67450 45053 45862 54492 41920 46154 57326 52440 36295 61004 FALSE TRUE 72614.02386 42815.73353 47391.01619 50039.82929 40274.01017 47910.42281 49799.02734 59294.08805 39451.87349 59013.44448 1.230465778 0.725525072 0.803054569 0.847939478 0.682454829 0.811856065 0.843859019 1.004755587 0.668523484 1 15.84875605 -4.753576508 24.99931212 0.817431992 1.230466524 0.558787836 0.109145598 208.5361419 662969.3249 0.025965543 0.276008533 1.76E-05 4.753576508 0.413034532 EQQSWVISPPQPS(ph)PQK ddPTM_A459_MK2206_30min_R1 2 EQQSWVISPPQPSPQK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 EQQSWVIS(0.049)PPQPS(0.951)PQK;EQQSWVIS(0.027)PPQPS(0.973)PQK 145.52 0.00066366 2798700 1936.71 1535.2 1975.14 1720.56 1804.74 1536.48 1784.79 1491.14 1862.2 1602.03 TRUE FALSE 1771.982644 1435.258201 1841.073 1853.077829 1732.853384 1623.47417 1665.729916 1478.10312 2055.782354 1800.501571 0.984160566 0.797143543 1.022533404 1.029200895 0.962428143 0.901678841 0.925147716 0.820939645 1.141783149 1 10.81418314 -8.271877529 24.99313183 1.070891567 0.932261025 0.334272666 0.079269387 933.4603639 2235054.619 0.073584703 0.019830277 5.35E-09 8.271877529 -0.138630541 EQQSWVISPPQPS(ph)PQK ddPTM_A459_MK2206_30min_R2 2 EQQSWVISPPQPSPQK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 EQQSWVISPPQPS(1)PQK;EQQSWVIS(0.003)PPQPS(0.997)PQK 195.55 1.63E-20 3776100 52519 51997 47468 48598 54037 46752 57778 49706 47929 60347 TRUE FALSE 56539.89502 49414.90459 49050.55943 44627.38794 51915.23587 48531.18012 50191.6792 56202.74487 52097.77778 58377.88233 0.968515691 0.846466206 0.840225056 0.764457122 0.889296319 0.831328205 0.859772181 0.962740384 0.892423221 1 15.83313426 -7.733226489 8.70371656 0.94568291 0.852642725 0.387274659 0.054147847 0.248244994 69.20516556 0.02587571 0.014618763 1.85E-08 7.733226489 -0.093040185 EQS(ph)AEEDAEAEVDNSK ddPTM_A459_MK2206_30min_R2 2 EQSAEEDAEAEVDNSK 16 0 Q8NEZ4;Q8NEZ4-3;C9J4Z5;H0YMU7 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 EQS(1)AEEDAEAEVDNSK;EQS(1)AEEDAEAEVDNSK 238.72 2.32E-21 9977200 64198 42843 50293 51020 43465 32744 51363 44886 33744 61060 TRUE FALSE 69113.04824 40715.47892 51969.74352 46851.5028 41758.34571 33990.09586 44618.9764 50752.75432 36678.99212 59067.6172 1.170066637 0.689302885 0.879834772 0.793184236 0.706958359 0.57544383 0.755388122 0.859231449 0.620966172 1 15.85007979 -4.755734187 24.99952966 0.756592811 1.170067299 0.505102221 0.120213065 148.9422994 652582.1882 0.028966023 0.250134475 1.75E-05 4.755734187 0.413474489 EQS(ph)FTSLEVR ddPTM_A459_MK2206_30min_R2 1 EQSFTSLEVR 10 0 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6 P46100-4 ATRX Transcriptional regulator ATRX 1 EQS(0.956)FT(0.041)S(0.003)LEVR 128.54 0.0031003 3144400 10020 10822 8536.6 11814 8738.4 8035.1 11741 7996.9 7582.4 10312 TRUE FALSE 10787.1389 10284.59522 8821.205983 10848.75841 8395.286509 8340.881361 10199.3926 9042.122287 8241.903446 9975.520285 1.081361031 1.03098334 0.884285304 1.087538103 0.841588836 0.836134971 1.022442169 0.906431146 0.82621289 1 13.28417637 -4.083037456 0.652917946 0.912299215 1.420094245 0.284034927 0.083210278 9.613397 1.595704833 0.03619772 4.473654184 8.26E-05 4.083037456 0.50779503 EQS(ph)GTIYLQHADEER ddPTM_A459_MK2206_30min_R2 2 EQSGTIYLQHADEER 15 0 M0QXN5;P37198 M0QXN5 NUP62 Nuclear pore glycoprotein p62 1 EQS(0.55)GT(0.45)IYLQHADEER;EQS(0.955)GT(0.045)IYLQHADEER 149.72 0.000185 7451400 25965.8 28090.5 22638 32052 25246 22114.5 23781 21830.5 23171.8 24508.1 TRUE FALSE 27953.76161 26695.56662 23392.73962 29433.24907 24254.71519 22956.08279 20658.52613 24683.82131 25187.24128 23708.4027 1.179065581 1.125996 0.986685603 1.241469087 1.02304299 0.968267794 0.871358834 1.041142316 1.062376137 1 14.53311085 -6.50411868 22.59993546 0.985180357 1.123552702 0.445796543 0.076339014 216.4515149 260755.761 0.02437898 0.027108404 3.13E-07 6.50411868 0.138372345 EQS(ph)TPPKSPQ ddPTM_A459_MK2206_30min_R1 2 EQSTPPKSPQ 10 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 EQS(0.5)T(0.5)PPKSPQ;EQS(0.497)T(0.497)PPKS(0.006)PQ 140.78 0.0065539 75678000 12593.7 13153.2 13674.7 13087.3 13682.1 12375.6 13666.4 13332.6 10294.8 9815.1 TRUE FALSE 11522.53968 12296.92429 12746.49946 14095.28611 13137.11298 13076.29578 12754.73939 13216.03448 11364.9813 11031.06869 1.044553344 1.114753669 1.155509029 1.27778065 1.190919335 1.18540607 1.156256003 1.198073809 1.030270196 1 13.42928495 -8.340418289 4.917087368 1.004937009 1.168277184 0.527558729 0.056965572 0.186513456 7.748647632 0.058409145 0.015412632 4.57E-09 8.340418289 0.163340175 EQS(ph)TPPKSPQ ddPTM_A459_MK2206_30min_R2 2 EQSTPPKSPQ 10 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 EQS(0.935)T(0.065)PPKSPQ;EQS(0.499)T(0.499)PPKS(0.003)PQ 150.06 0.0034401 68684000 203385 274600 273840 307920 323790 288800 346750 269080 297510 333740 TRUE FALSE 218956.312 260963.7633 282969.6889 282761.951 311076.3777 299790.4864 301221.3085 304249.6799 323386.882 322850.0911 0.67819808 0.808312497 0.876473932 0.875830482 0.963531949 0.928574885 0.933006732 0.942386848 1.001662663 1 18.30050491 -3.712978066 0.498739323 0.968971183 1.25E-16 0.927896836 0.025018283 2.988073123 0.252192143 0.01452023 2.135356743 0.000193652 3.712978066 -0.968971183 EQSEASRS(ph)PSR ddPTM_A459_MK2206_30min_R2 1 EQSEASRSPSR 11 1 Q6UXY1;Q6UXY1-2 Q6UXY1 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 EQSEASRS(0.5)PS(0.5)R 115.06 0.029837 1623300 8918.3 9002.8 6952.8 10235 10600 8821.1 8871.4 13349 11500 10379 TRUE FALSE 9601.091905 8555.734043 7184.602882 9398.76776 10183.79074 9156.793142 7706.574524 15093.76013 12500.24921 10040.33408 0.956252235 0.852136391 0.715574086 0.936101098 1.014288036 0.912000843 0.767561563 1.503312541 1.245003315 1 13.29351965 -7.751655527 24.99999906 1.280618473 0.880455486 0.589987337 0.140744032 121.2828277 309907.6239 0.065931209 0.037459765 1.77E-08 7.751655527 -0.400162987 EQSEVSVS(ph)PR ddPTM_A459_MK2206_30min_R1 4 EQSEVSVSPR 10 0 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 EQSEVSVS(1)PR;EQSEVSVS(1)PR;EQSEVSVS(1)PR;EQSEVSVS(1)PR 182.25 7.43E-05 430568000 14095.6 13954.9 14183.7 11354.5 15136.2 13031.3 15427.2 12534.6 12601.2 10985.9 TRUE FALSE 12896.6952 13046.43347 13220.94996 12229.02556 14533.2931 13769.12094 14398.07964 12425.01131 13911.13983 12346.91623 1.044527634 1.056655219 1.070789638 0.990451812 1.177078781 1.115187038 1.166127587 1.006325068 1.126689416 1 13.59186314 -6.248852653 24.97202252 1.103093171 1.043908418 0.188992559 0.058211338 1280.446414 2540399.349 0.016823273 0.021569634 5.64E-07 6.248852653 -0.059184754 EQSEVSVS(ph)PR ddPTM_A459_MK2206_30min_R2 2 EQSEVSVSPR 10 0 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 EQSEVSVS(1)PR;EQSEVSVS(1)PR 155.86 0.00051843 428139000 303730 394220 317604 378690 352100 352750 373560 297394 347070 346710 TRUE FALSE 326983.8023 374643.608 328192.7588 347749.8156 338274.7848 366174.1484 324511.1233 336264.4169 377257.5212 335396.8811 0.974916049 1.117015778 0.978520605 1.036830797 1.008580592 1.091763726 0.967543652 1.002586595 1.124809271 1 18.35550975 EQSFT(ph)SLEVR ddPTM_A459_MK2206_30min_R1 1 EQSFTSLEVR 10 0 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6 P46100-4 ATRX Transcriptional regulator ATRX 1 EQS(0.133)FT(0.667)S(0.2)LEVR 101.56 0.023587 0 868.48 838.2 773.45 576.81 850.25 802.49 994.68 826.21 715.37 772.17 TRUE FALSE 794.6112154 783.6330277 720.950369 621.2360061 816.3827421 847.9262903 928.3267121 818.9865331 789.7352715 867.8322492 0.915627664 0.902977538 0.830748534 0.71584803 0.940714917 0.977062435 1.069707553 0.943715256 0.910009132 1 9.761272388 -6.505517969 23.08639425 0.97959356 0.842868369 0.520377308 0.063135323 238.8322278 317600.0476 0.021290143 0.023564545 3.12E-07 6.505517969 -0.136725191 EQSGLQAS(ph)LEAEQEALEKDQER ddPTM_A459_MK2206_30min_R2 1 EQSGLQASLEAEQEALEKDQER 22 1 A0A1B0GTU3;Q96L93-5;Q96L93-6;Q96L93-4;Q96L93;Q96L93-2 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 1 EQS(0.01)GLQAS(0.99)LEAEQEALEKDQER 59.574 0.0092851 3995700 4513.3 7092.4 7501.7 6286 7231.5 8590.8 5999.9 7980 6345.6 6059.3 TRUE FALSE 4858.841718 6740.201729 7751.802934 5772.413692 6947.554975 8917.728914 5212.105923 9023.013399 6897.528818 5861.585537 0.828929594 1.149893947 1.322475444 0.984787078 1.185268889 1.521385103 0.889197281 1.539346878 1.176734311 1 12.51707525 -4.778846253 3.825374473 1.214816259 0.789568183 0.226529388 0.204590752 0.349080832 9.171149294 0.048709084 0.420083885 1.66E-05 4.778846253 -0.425248077 EQSRPFVMGY(ph)MNERK ddPTM_A459_MK2206_30min_R1 1 EQSRPFVMGYMNERK 15 2 H0YN02;Q3MJ13 H0YN02 WDR72 WD repeat-containing protein 72 1 EQSRPFVMGY(1)MNERK 73.951 0.044275 0 387.75 474.47 432.34 337.31 520.24 464.97 511.62 413.04 400.91 357.57 TRUE FALSE 354.7698263 443.5819168 402.9939654 363.2896746 499.5177392 491.2961996 477.4907633 409.4288348 442.5860292 401.8684711 0.882800846 1.103798752 1.002800653 0.904001435 1.242988129 1.222529845 1.188176724 1.01881303 1.101320609 1 8.650579584 -4.759401586 24.83326099 1.091643678 0.882800558 0.26010531 0.103151304 74.60132534 908866.3555 0.027713976 0.17618513 1.74E-05 4.759401586 -0.20884312 EQSSDLTPSGDVS(ph)PVKPLSR ddPTM_A459_MK2206_30min_R1 3 EQSSDLTPSGDVSPVKPLSR 20 1 Q8WYQ5-3;Q8WYQ5 Q8WYQ5-3 DGCR8 Microprocessor complex subunit DGCR8 1 EQSSDLTPSGDVS(0.5)PVKPLS(0.5)R;EQSSDLTPSGDVS(0.874)PVKPLS(0.126)R;EQSSDLTPSGDVS(0.734)PVKPLS(0.265)R 171.16 8.82E-10 200365000 11895.8 11762.3 12289.8 9972.4 10516.8 10145.5 11749.3 11539.1 11149.7 10803.7 TRUE FALSE 10883.99974 10996.57213 11455.60262 10740.47598 10097.89359 10719.92944 10965.52563 11438.21487 12308.75121 12142.14392 0.89638204 0.905653252 0.943457983 0.884561742 0.831640084 0.882869575 0.903096332 0.942025967 1.013721407 1 13.56773556 -8.016557108 2.266160355 1.008010868 0.891294216 0.749969981 0.026321413 0.174854185 1.657176791 0.024429601 0.008222526 9.63E-09 8.016557108 -0.116716652 EQSSDLTPSGDVS(ph)PVKPLSR ddPTM_A459_MK2206_30min_R2 4 EQSSDLTPSGDVSPVKPLSR 20 1 Q8WYQ5-3;Q8WYQ5 Q8WYQ5-3 DGCR8 Microprocessor complex subunit DGCR8 1 EQSSDLTPSGDVS(0.889)PVKPLS(0.111)R;EQSSDLTPS(0.002)GDVS(0.998)PVKPLSR;EQSSDLTPSGDVS(0.999)PVKPLS(0.001)R;EQSSDLTPSGDVS(1)PVKPLSR 164.27 1.05E-07 311375000 583763 718031 642673 680560 738909 627878 831751 637577 629410 787795 TRUE FALSE 628456.3441 682374.6247 664099.3971 624956.071 709895.7199 651772.3373 722541.0946 720910.503 684154.9441 762089.3137 0.824649202 0.895399807 0.87141938 0.820056206 0.931512498 0.855244032 0.948105533 0.945965899 0.897735911 1 19.53960056 -7.971158172 0.189743971 1.037860568 0.807788744 0.590124305 0.03525559 2.178967274 0.432410726 0.207186454 0.204626211 1.07E-08 7.971158172 -0.230071823 EQSSEAAET(ph)GVSENEENPVR ddPTM_A459_MK2206_30min_R2 1 EQSSEAAETGVSENEENPVR 20 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 EQSSEAAET(0.928)GVS(0.072)ENEENPVR 239 1.20E-29 10644000 54879 57707 52427 61768 66364 51024 61578 55849 46352 62490 TRUE FALSE 59080.57843 54841.35429 54174.89001 56721.35681 63758.21591 52965.75407 53492.73463 63148.65606 50383.61317 60450.95642 0.977330748 0.90720408 0.896179204 0.938303712 1.054709796 0.876177272 0.884894761 1.044626252 0.833462631 1 15.88347754 -5.994686956 24.90911337 0.949105631 0.923652422 0.018847651 0.070418917 682.8678063 3201425.266 0.019437136 0.02872302 1.01E-06 5.994686956 -0.025453209 EQSSEAAETGVS(ph)ENEENPVR ddPTM_A459_MK2206_30min_R1 1 EQSSEAAETGVSENEENPVR 20 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 EQSSEAAET(0.028)GVS(0.972)ENEENPVR 188.34 1.35E-15 5338300 1183.8 1022.5 1062.9 1084.6 1134.2 1096.7 1166 1028.9 899.44 1218.4 TRUE FALSE 1083.111594 955.9350642 990.7533094 1168.13608 1089.022412 1158.794206 1088.218267 1019.904436 992.9400067 1369.34459 0.790970805 0.698096791 0.723523733 0.853062179 0.795287337 0.846240029 0.794700089 0.744812111 0.725120626 1 10.41926983 -11.80387985 2.355631975 2.03024495 0.775622451 0.653832489 0.049187608 8235206.782 1313834.883 45169529.69 0.014218184 1.57E-12 11.80387985 -1.254622499 EQSSEAAETGVS(ph)ENEENPVR ddPTM_A459_MK2206_30min_R2 1 EQSSEAAETGVSENEENPVR 20 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 EQSSEAAET(0.243)GVS(0.757)ENEENPVR 145.19 2.73E-05 12907000 33080 29371 28166 34000 32194 30343 34527 30297 26035 35336 TRUE FALSE 35612.63023 27912.47885 29105.04038 31222.09124 30929.9018 31497.72413 29993.56343 34256.92193 28299.47724 34182.98921 1.041823172 0.816560502 0.851448076 0.913380952 0.90483315 0.921444404 0.87744121 1.002162851 0.827881876 1 15.06099094 -11.436227 2.878446311 1.053684508 0.904652933 0.146363437 0.067754947 122771556.3 51215057.9 44201309.5 0.015954885 3.66E-12 11.436227 -0.149031575 EQTFS(ph)GGTSQDTK ddPTM_A459_MK2206_30min_R2 1 EQTFSGGTSQDTK 13 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 EQT(0.025)FS(0.84)GGT(0.104)S(0.025)QDT(0.006)K 136.39 0.0014973 0 18163 19407 18510 16860 14903 13341 17442 15695 12785 18753 TRUE FALSE 19553.57324 18443.2766 19127.11416 15482.48407 14317.83334 13848.7011 15151.84445 17746.39039 13897.01619 18141.09115 1.077860923 1.016657513 1.054353016 0.853448337 0.789248741 0.763388541 0.835222332 0.978242722 0.766051837 1 14.14697361 -5.767228034 11.23062898 0.84674284 1.046386094 0.569603637 0.07723971 0.130799106 231.7772931 0.021317912 0.033360155 1.71E-06 5.767228034 0.199643254 EQTFSGGTS(ph)QDTK ddPTM_A459_MK2206_30min_R1 2 EQTFSGGTSQDTK 13 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 EQTFS(0.066)GGT(0.066)S(0.853)QDT(0.015)K;EQTFS(0.007)GGT(0.037)S(0.955)QDTK 187.16 6.81E-15 3337900 3721.2 4128.1 4219.7 3378.3 3202.4 3219 4235.3 3248.8 4115.8 4284.4 TRUE FALSE 3404.692399 3859.35994 3933.278521 3638.497251 3074.841627 3401.256998 3952.770865 3220.396084 4543.652139 4815.183818 0.707074232 0.801497946 0.81684909 0.75562998 0.638572014 0.70636078 0.82089719 0.668800238 0.943609281 1 12.23337516 -8.386720493 4.83588933 0.995903363 0.743320212 0.715280463 0.058939756 0.120420826 3.93271988 0.058944634 0.015397214 4.10E-09 8.386720493 -0.252583151 EQTFSGGTS(ph)QDTK ddPTM_A459_MK2206_30min_R2 1 EQTFSGGTSQDTK 13 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 EQTFS(0.011)GGT(0.238)S(0.565)QDT(0.186)K 162.94 0.00036318 4011200 15360 11781 14563 15777 13974 10348 15358 12462 9691.5 13199 TRUE FALSE 16535.97341 11195.97267 15048.52315 14487.96863 13425.31055 10741.80039 13341.47615 14090.82619 10534.44915 12768.31771 1.295078473 0.87685574 1.178583075 1.134681088 1.051454925 0.841285488 1.044889112 1.103577347 0.825045976 1 13.64028083 -6.529545229 24.88961864 0.971422246 1.106073135 0.259229607 0.125052136 253.5517342 946637.893 0.039790292 0.039886213 2.95E-07 6.529545229 0.134650889 EQTLS(ph)PTITSGLHNIAR ddPTM_A459_MK2206_30min_R1 2 EQTLSPTITSGLHNIAR 17 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0Y8W8 D6REX3 SEC31A Protein transport protein Sec31A 1 EQT(0.001)LS(0.565)PT(0.422)IT(0.012)SGLHNIAR;EQT(0.024)LS(0.735)PT(0.234)IT(0.006)SGLHNIAR 175.34 7.14E-08 71227000 11911.4 7230.1 8613.1 6296.5 16071.9 14698 15143.6 11356.6 7680.6 7587.4 TRUE FALSE 10898.27288 6759.419176 8028.466769 6781.457521 15431.72219 15530.18806 14133.39808 11257.31044 8479.025855 8527.384394 1.278032322 0.792672039 0.941492303 0.795256459 1.809666538 1.821213556 1.657413038 1.320136389 0.99432903 1 13.05788758 -6.249006802 24.88668862 1.480351938 0.939751675 0.375209829 0.300925061 744.8870021 1491063.629 0.093227032 0.119461129 5.64E-07 6.249006802 -0.540600264 EQTLS(ph)PTITSGLHNIAR ddPTM_A459_MK2206_30min_R2 3 EQTLSPTITSGLHNIAR 17 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0Y8W8 D6REX3 SEC31A Protein transport protein Sec31A 1 EQT(0.021)LS(0.706)PT(0.188)IT(0.083)S(0.002)GLHNIAR;EQT(0.155)LS(0.784)PT(0.055)IT(0.005)SGLHNIAR;EQT(0.019)LS(0.931)PT(0.049)IT(0.001)SGLHNIAR 237.16 2.08E-22 68660000 84076 124416 92634 134208 133737 151018 139092 96569 127392 98382 TRUE FALSE 90512.9232 118237.6824 95722.37133 123242.7771 128485.8134 156765.0958 120829.0533 109190.8999 138472.3259 95171.8034 0.951047684 1.242360428 1.00578499 1.294950528 1.350040756 1.647180049 1.269588775 1.147303045 1.454972176 1 16.53824659 -5.852765966 5.899764612 1.332153387 1.084958827 0.277245107 0.176787414 0.264966798 13.77765493 0.049603433 0.074770786 1.40E-06 5.852765966 -0.247194559 EQTLSPT(ph)ITSGLHNIAR ddPTM_A459_MK2206_30min_R1 2 EQTLSPTITSGLHNIAR 17 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0Y8W8 D6REX3 SEC31A Protein transport protein Sec31A 1 EQTLS(0.334)PT(0.434)IT(0.23)S(0.002)GLHNIAR;EQT(0.013)LS(0.243)PT(0.607)IT(0.138)SGLHNIAR 207.16 1.28E-08 29516000 7085.2 3899.3 4726.7 3342.3 8614.9 7375.5 8129.2 6172.8 4117.8 3837.2 TRUE FALSE 6482.566534 3645.454861 4405.864773 3599.724525 8271.750291 7793.094436 7586.915901 6118.83186 4545.860046 4312.581305 1.503175494 0.845306929 1.021630541 0.834702993 1.918050862 1.807060293 1.759251679 1.418832812 1.054092601 1 12.07433594 -6.248912998 24.96053182 1.542850487 1.034384665 0.290913193 0.331950866 888.1217209 1769703.509 0.100269762 0.128534469 5.64E-07 6.248912998 -0.508465821 EQTLSPTIT(ph)SGLHNIAR ddPTM_A459_MK2206_30min_R2 1 EQTLSPTITSGLHNIAR 17 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0Y8W8 D6REX3 SEC31A Protein transport protein Sec31A 1 EQT(0.047)LS(0.332)PT(0.089)IT(0.531)S(0.002)GLHNIAR 229.62 5.54E-16 15432000 33225 54314 47139 54101 56039 63410 60434 37276 58672 45977 TRUE FALSE 35768.73155 51616.84574 48710.59073 49680.77524 53838.62729 65823.11198 52498.94321 42148.10119 63775.18451 44476.77426 0.80421146 1.160534832 1.095191626 1.11700491 1.210488579 1.479943478 1.180367598 0.947642942 1.433898604 1 15.44076454 -4.263841186 1.315873024 1.19747263 5.95E-24 0.328372553 0.159916049 5.538947903 3.308404493 0.046335376 12.43413187 5.45E-05 4.263841186 -1.19747263 EQVANS(ph)AFVER ddPTM_A459_MK2206_30min_R2 1 EQVANSAFVER 11 0 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 1 EQVANS(1)AFVER 125.47 0.003344 9869700 28536 38192 24291 43378 32936 49268 38854 29526 26095 29136 TRUE FALSE 30720.7381 36295.44082 25100.84982 39833.87864 31642.76715 51142.92826 33752.42313 33385.14958 28364.69593 28185.29471 1.089956249 1.287743882 0.890565455 1.413285866 1.122669374 1.814525227 1.197518901 1.184488221 1.006365065 1 14.78265503 -8.123290834 2.494638705 0.995743296 1.266669092 0.164641735 0.228020299 0.561935232 6.271303653 0.199305712 0.06248705 7.53E-09 8.123290834 0.270925796 EQWIQDAEECDR ddPTM_A459_MK2206_30min_R1 2 EQWIQDAEECDR 12 0 O94906;O94906-2 O94906 PRPF6 Pre-mRNA-processing factor 6 0 ; 187.78 0.0016495 5611300 1918.98 1705.39 1938.95 2141.86 2101.8 1647.59 1894.83 1849.94 1460.6 1182.05 FALSE TRUE 1755.760674 1594.368801 1807.339476 2306.826428 2018.080855 1740.875122 1768.429348 1833.76617 1612.434597 1328.491278 1.321620023 1.200134941 1.36044512 1.736425723 1.519077234 1.310415169 1.33115616 1.38033738 1.213733672 1 10.37557304 -8.62490937 0.994767836 0.998814928 1.411009869 0.455201597 0.136816959 0.702648617 1.484511685 0.147219529 0.048606859 2.37E-09 8.62490937 0.412194941 EQYGLGPYEAVT(ph)PLTK ddPTM_A459_MK2206_30min_R2 1 EQYGLGPYEAVTPLTK 16 0 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 EQYGLGPYEAVT(0.995)PLT(0.005)K 115.66 0.0046361 3020600 13583 15771 12574 17597 14297 11159 14761 12399 10704 11034 TRUE FALSE 14622.92492 14987.83507 12993.21088 16159.26881 13735.62794 11583.66356 12822.86297 14019.59187 11635.01457 10673.96148 1.369962309 1.404149256 1.217281035 1.513896114 1.286835067 1.085226285 1.201321832 1.313438492 1.090037152 1 13.38180809 -6.551157019 6.885578872 1.163299376 1.371155965 0.537119448 0.103588578 0.153217947 25.04152805 0.033207238 0.033613052 2.81E-07 6.551157019 0.207856589 EQYVPPRS(ph)PK ddPTM_A459_MK2206_30min_R1 5 EQYVPPRSPK 10 1 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK 116.24 0.0080954 260530000 35016.5 43339.6 42776.8 37689.2 30708.8 26688.6 32085.4 34141.8 34844.2 31819.4 TRUE FALSE 32038.1628 40518.18416 39873.23 40592.02871 29485.60347 28199.68547 29945.04151 33843.30184 38466.37928 35761.4275 0.895886016 1.133013613 1.114978702 1.135078535 0.824508571 0.78855033 0.837355878 0.946363281 1.075638809 1 15.12611671 -6.25802922 24.94545722 0.899476004 1.07749021 0.35571665 0.102910205 311.9768606 2282121.703 0.032519984 0.040285046 5.52E-07 6.25802922 0.178014206 EQYVPPRS(ph)PK ddPTM_A459_MK2206_30min_R2 4 EQYVPPRSPK 10 1 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK 135.94 0.0090683 364787900 347677 348113 367438 360701 324777 257702 392876 290374 309061 424581 TRUE FALSE 374295.4184 330826.2146 379688.1995 331230.5745 312024.6231 267509.0302 341290.9093 328326.8788 335942.5671 410726.9567 0.911299861 0.805465064 0.924429705 0.806449562 0.759688689 0.651306241 0.830943535 0.799379913 0.817921886 1 18.64782011 -5.911639224 7.766442806 0.792094482 0.872556514 0.101879927 0.086618208 0.452398973 34.52101433 0.023721922 0.035318587 1.23E-06 5.911639224 0.080462032 ERDDILR ddPTM_A459_MK2206_30min_R1 2 ERDDILR 7 1 P18206;P18206-2 P18206 VCL Vinculin 0 ; 133.81 0.0087473 10315700 3369.2 3413.4 3228.6 1949.67 2866.9 2754.3 5190.6 2852.3 4418.1 7352.7 FALSE TRUE 3082.631848 3191.18704 3009.451627 2099.833921 2752.705302 2910.246086 4844.344545 2827.362642 4877.377305 8263.607986 0.373037038 0.386173575 0.364181316 0.254106188 0.333111797 0.352176203 0.586226325 0.342146269 0.590223703 1 13.0125561 -9.205330952 0.535165938 1.037819988 0.339713064 0.858906225 0.07795083 0.87465719 0.388638431 0.148433762 0.037363003 6.23E-10 9.205330952 -0.698106924 down ERDDILR ddPTM_A459_MK2206_30min_R2 2 ERDDILR 7 1 P18206;P18206-2 P18206 VCL Vinculin 0 ; 120.62 0.026176 14282500 33869 28130 29300 40109 25281 33931 36906 26837 27137 49493 FALSE TRUE 36462.03668 26733.1051 30276.84738 36831.9664 24288.34091 35222.26798 32060.19787 30344.68805 29497.32721 47878.04746 0.761560644 0.558358298 0.632374313 0.769287144 0.507295978 0.735666341 0.669622083 0.63379126 0.616092944 1 15.5470767 -10.56239599 4.266390793 1.000023524 0.651721836 0.624676454 0.080494778 11039888.68 3038625.682 2828.704014 0.018280392 2.74E-11 10.56239599 -0.348301687 ERDEDDEDGDGDGDGATGK ddPTM_A459_MK2206_30min_R1 1 ERDEDDEDGDGDGDGATGK 19 1 P50579-3;P50579;G3V1U3;F8VQZ7;F8VY03 P50579-3 METAP2 Methionine aminopeptidase 2 0 231.42 2.65E-23 4044300 1707.6 1864.4 1756.6 1219.1 1451.1 1356.2 1854.7 1265.7 2051 2814.7 FALSE TRUE 1562.359653 1743.027221 1637.366886 1312.995293 1393.299614 1432.986872 1730.976347 1254.634118 2264.20879 3163.406286 0.493885234 0.550996952 0.517596141 0.415057433 0.440442829 0.452988564 0.547187491 0.396608594 0.715750234 1 11.62726314 -8.541482569 3.473124937 0.999252351 0.479920712 0.913221386 0.050787887 0.058045944 1.951172482 0.050528158 0.013339081 2.87E-09 8.541482569 -0.519331639 down ERDEDDEDGDGDGDGATGK ddPTM_A459_MK2206_30min_R2 1 ERDEDDEDGDGDGDGATGK 19 1 P50579-3;P50579;G3V1U3;F8VQZ7;F8VY03 P50579-3 METAP2 Methionine aminopeptidase 2 0 138.28 0.00041975 4792600 38898 27079 28232 27226 25097 21560 36735 27798 20120 39280 FALSE TRUE 41876.06079 25734.29624 29173.24079 25001.54871 24111.56568 22380.48091 31911.65037 31431.29404 21870.00123 37998.29682 1.102050994 0.677248677 0.767751274 0.657964983 0.634543327 0.588986423 0.839817914 0.827176392 0.575552145 1 15.21364713 -10.1603591 16.10471971 1 0.735493099 0.213180486 0.14877297 0 0 0.141488538 0.034316011 6.91E-11 10.1603591 -0.264506901 ERDEENQEMSSCK ddPTM_A459_MK2206_30min_R1 1 ERDEENQEMSSCK 13 1 O60934;A0A0C4DG07 O60934 NBN Nibrin 0 105.66 0.019367 3568000 2179.8 2066.8 2253.4 2120.3 2046.5 1791.7 1717.5 1828.4 1630.1 1490 FALSE TRUE 1994.396563 1932.250944 2100.445486 2283.605873 1964.983571 1893.144506 1602.928709 1812.414492 1799.554728 1674.592449 1.190974296 1.153863405 1.254302495 1.363678592 1.173410027 1.130510595 0.957205265 1.082301842 1.074622503 1 10.70959431 -6.858135749 2.590504112 1.036280903 1.236004029 0.685658184 0.063350988 0.175329144 2.393199044 0.026192047 0.022898809 1.39E-07 6.858135749 0.199723126 ERDGQS(ph)SPQPSPR ddPTM_A459_MK2206_30min_R1 1 ERDGQSSPQPSPR 13 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 ERDGQS(0.5)S(0.5)PQPSPR 74.338 0.027143 500170 318.05 329.7 459.65 309.46 513.3 309.62 389.9 424.16 187.69 264.6 TRUE FALSE 290.9981774 308.2364701 428.4502387 333.2946628 492.8541741 327.1504168 363.8904824 420.4516138 207.2010472 297.3806456 0.978537715 1.036504812 1.440746884 1.120767837 1.657317587 1.10010662 1.223652204 1.41384996 0.696753639 1 8.216166946 -8.262516641 24.99938598 0.848376805 1.249784895 0.36853478 0.208384574 101.9463736 2365642.779 0.164944756 0.051897527 5.46E-09 8.262516641 0.401408089 ERDHS(ph)PTPS(ph)VFNSDEER ddPTM_A459_MK2206_30min_R2 2 ERDHSPTPSVFNSDEER 17 1 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 ERDHS(1)PT(0.007)PS(0.908)VFNS(0.085)DEER;ERDHS(0.998)PT(0.011)PS(0.743)VFNS(0.248)DEER 95.227 0.012783 32603000 63768 57152 55867 62345 53707 62103 64092 68684 46167 65798 TRUE FALSE 68650.12711 54313.91479 57729.5779 57251.21407 51598.19332 64466.37318 55676.64341 77661.23463 50182.52221 63651.01665 1.078539365 0.853307891 0.906970241 0.899454825 0.810642092 1.012809796 0.874717268 1.220109885 0.788400953 1 15.95789594 ERDHS(ph)PTPSVFNSDEER ddPTM_A459_MK2206_30min_R1 3 ERDHSPTPSVFNSDEER 17 1 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 ERDHS(0.966)PT(0.031)PS(0.003)VFNSDEER;ERDHS(0.528)PT(0.452)PS(0.02)VFNSDEER;ERDHS(0.542)PT(0.456)PS(0.003)VFNSDEER 69.081 0.015027 54557000 6986.8 7119.6 7425 6280.2 8286.1 7728.4 7777.9 6248.9 6539.2 6510.8 TRUE FALSE 6392.535971 6656.112746 6921.011687 6763.902092 7956.047091 8165.975329 7259.050483 6194.266526 7218.973241 7317.407058 0.873606719 0.909627235 0.945828438 0.924357773 1.087276822 1.115965705 0.992024965 0.846511131 0.986547992 1 12.8371168 -6.037785389 23.10282634 1.002323513 0.913916659 0.297722657 0.068870232 347.2359066 212307.0869 0.023199352 0.029962481 9.17E-07 6.037785389 -0.088406854 ERDHS(ph)PTPSVFNSDEER ddPTM_A459_MK2206_30min_R2 3 ERDHSPTPSVFNSDEER 17 1 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 ERDHS(0.493)PT(0.493)PS(0.014)VFNSDEER;ERDHS(0.777)PT(0.223)PSVFNSDEER;ERDHS(0.6)PT(0.363)PS(0.037)VFNSDEER 114.56 0.00072791 82616000 205719 286169 267946 286063 266848 286415 298289 220890 214926 256009 TRUE FALSE 221469.0048 271958.2636 276879.1859 262690.7378 256370.2067 297314.7235 259123.296 249761.0814 233619.875 247655.4473 0.894262602 1.098131564 1.118001598 1.060710518 1.035189048 1.200517601 1.046305659 1.008502273 0.943326212 1 17.91797483 -7.82345948 3.14343485 0.973974872 1.072829928 0.207598713 0.073887335 0.373667553 7.353052138 0.046000371 0.020302105 1.50E-08 7.82345948 0.098855056 ERDKEVS(ph)DDEAEEK ddPTM_A459_MK2206_30min_R2 1 ERDKEVSDDEAEEK 14 2 P07900;P07900-2;G3V2J8 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ERDKEVS(1)DDEAEEK 77.505 0.045242 61734000 69745 42256 50780 33128 35283 23395 55003 46861 24971 49835 TRUE FALSE 75084.73082 40157.62849 52472.97986 30421.33643 33897.61214 24285.31312 47781.04003 52985.8936 27142.93244 48208.88803 1.557487299 0.832992216 1.088450325 0.631031697 0.703140303 0.503751779 0.991125122 1.099089727 0.563027557 1 15.55701153 -2.660934594 1.300716 0.801348098 199.9999945 0.52153868 0.208869196 314.7160661 2.667809379 0.061276838 184888.558 0.002183059 2.660934594 199.1986464 ERDSELS(ph)DTDSGCCLGQSESDK ddPTM_A459_MK2206_30min_R2 1 ERDSELSDTDSGCCLGQSESDK 22 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 ERDS(0.145)ELS(0.706)DT(0.146)DS(0.003)GCCLGQSESDK 109.98 2.74E-05 18173000 31956 28919 29479 32355 35442 28388 37782 29784 26169 40669 TRUE FALSE 34402.57593 27482.92451 30461.81515 29711.493 34050.369 29468.32523 32821.17802 33676.87106 28445.13232 39341.97386 0.874449667 0.698564963 0.774282837 0.75521104 0.86549722 0.749030167 0.834253465 0.856003595 0.723022501 1 15.26378172 -14.52287875 0.371119752 3.75250071 0.786766112 0.514029856 0.05993738 427.5075448 3.29305445 944.1638782 0.0402239 3.00E-15 14.52287875 -2.965734599 ERDSELSDT(ph)DSGCCLGQSESDK ddPTM_A459_MK2206_30min_R1 1 ERDSELSDTDSGCCLGQSESDK 22 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 ERDS(0.002)ELS(0.036)DT(0.948)DS(0.015)GCCLGQSESDK 110.55 6.61E-05 9327000 1989.5 2237.8 2557.5 2108.4 1686.1 2051.6 2664.6 2310.5 2521.8 2716.4 TRUE FALSE 1820.282578 2092.118813 2383.904026 2270.789333 1618.939067 2167.759819 2486.849396 2290.299542 2783.950134 3052.92814 0.596241541 0.685282692 0.780858218 0.743807004 0.530290591 0.710059235 0.814578425 0.750197659 0.911895075 1 11.57597792 -8.208705157 0.89541904 1.000826377 0.677831372 0.681077955 0.073959309 0.345805454 0.574181802 0.07374403 0.027163278 6.18E-09 8.208705157 -0.322995005 ERDSELSDT(ph)DSGCCLGQSESDK ddPTM_A459_MK2206_30min_R2 2 ERDSELSDTDSGCCLGQSESDK 22 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 ERDS(0.021)ELS(0.041)DT(0.692)DS(0.245)GCCLGQSESDK;ERDS(0.051)ELS(0.154)DT(0.638)DS(0.154)GCCLGQS(0.003)ESDK 88.829 0.00066043 50122000 65748 62095 77431 72773 74418 58278 79992 63628 62511 81422 TRUE FALSE 70781.71743 59011.45259 80012.51089 66827.21311 71495.9754 60495.81013 69488.95431 71944.39807 67948.09379 78765.20681 0.89864193 0.749207105 1.015835724 0.848435697 0.907710121 0.768052451 0.882229059 0.913403278 0.862666354 1 16.26527086 -9.840716325 0.722807601 1.007896611 0.868803404 0.223934712 0.071465267 15.49199146 6.752298052 0.420226042 0.024622833 1.44E-10 9.840716325 -0.139093207 ERDSELSDTDS(ph)GCCLGQSESDK ddPTM_A459_MK2206_30min_R2 1 ERDSELSDTDSGCCLGQSESDK 22 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 ERDSELSDT(0.007)DS(0.962)GCCLGQS(0.029)ES(0.002)DK 88.945 0.00025956 23757000 47227 54107 44484 51414 55548 41206 63199 49410 45969 62803 TRUE FALSE 50842.73543 51420.12506 45967.07436 47213.31173 53366.90641 42774.1232 54900.89538 55868.05665 49967.30053 60753.74325 0.83686589 0.846369661 0.75661304 0.777125971 0.87841347 0.704057411 0.903662761 0.91958213 0.822456327 1 15.89068568 -8.768078937 0.498589938 1.003742668 0.801985379 0.450508413 0.060677553 1.276584112 0.690188923 0.082046552 0.033368098 1.71E-09 8.768078937 -0.201757288 ERECS(ph)PSSPLPPLPEDEEGSEVTNSK ddPTM_A459_MK2206_30min_R2 2 ERECSPSSPLPPLPEDEEGSEVTNSK 26 1 Q96GY3 Q96GY3 LIN37 Protein lin-37 homolog 1 ERECS(0.51)PS(0.245)S(0.245)PLPPLPEDEEGSEVTNSK;ERECS(0.333)PS(0.333)S(0.333)PLPPLPEDEEGSEVTNSK 87.896 3.64E-05 25295300 42144 50107 48025 55597 49940 43317 55469 41174 44996 55040 TRUE FALSE 45370.57704 47618.75924 49626.12953 51054.54725 47979.10467 44965.45879 48185.85367 46555.58317 48909.67075 53244.04931 0.852124841 0.894348943 0.932050251 0.958877995 0.90111675 0.844516136 0.904999794 0.874380964 0.918594122 1 15.70033267 -8.556098171 17.57778729 1.000000002 0.897379085 0.485069196 0.032306012 160.4959574 84926.33592 0.033616527 0.008679748 2.78E-09 8.556098171 -0.102620917 ERECSPS(ph)SPLPPLPEDEEGSEVTNSK ddPTM_A459_MK2206_30min_R1 2 ERECSPSSPLPPLPEDEEGSEVTNSK 26 1 Q96GY3 Q96GY3 LIN37 Protein lin-37 homolog 1 ERECS(0.169)PS(0.773)S(0.058)PLPPLPEDEEGSEVTNSK;ERECS(0.32)PS(0.392)S(0.288)PLPPLPEDEEGSEVTNSK 125.95 4.02E-09 16201400 2113.73 2697.94 2601.52 2473.78 2676 2417.64 2479.71 2735.82 2071.85 1943.43 TRUE FALSE 1933.946164 2522.303616 2424.936071 2664.310964 2569.409253 2554.524688 2314.29307 2711.901014 2287.226222 2184.196781 0.885426707 1.154796875 1.110218682 1.219812696 1.176363447 1.169548783 1.059562532 1.241601049 1.047170402 1 11.09288712 -4.759571957 24.99438768 1.141072844 0.885426385 0.493079467 0.074071366 36.83767426 492916.1116 0.016985166 0.106668959 1.74E-05 4.759571957 -0.255646459 ERECSPS(ph)SPLPPLPEDEEGSEVTNSK ddPTM_A459_MK2206_30min_R2 3 ERECSPSSPLPPLPEDEEGSEVTNSK 26 1 Q96GY3 Q96GY3 LIN37 Protein lin-37 homolog 1 ERECS(0.257)PS(0.568)S(0.175)PLPPLPEDEEGSEVTNSK;ERECS(0.079)PS(0.46)S(0.46)PLPPLPEDEEGSEVTNSK;ERECS(0.034)PS(0.483)S(0.483)PLPPLPEDEEGSEVTNSK 99.822 1.19E-06 54398000 133156 145088 134458 172079 161038 144001 144016 131739 125289 146513 TRUE FALSE 143350.5257 137883.1409 138940.7626 158019.5952 154714.839 149481.059 125106.5262 148957.7396 136186.4107 141732.2928 1.011417532 0.972842097 0.980304205 1.11491596 1.09159907 1.054671846 0.882695988 1.050979538 0.960870724 1 17.11280898 -9.576225133 9.162319789 1 1.014967635 0.00325691 0.064920188 0 0 0.065968917 0.015999813 2.65E-10 9.576225133 0.014967635 ERECSPSS(ph)PLPPLPEDEEGSEVTNSK ddPTM_A459_MK2206_30min_R1 2 ERECSPSSPLPPLPEDEEGSEVTNSK 26 1 Q96GY3 Q96GY3 LIN37 Protein lin-37 homolog 1 ERECS(0.002)PS(0.028)S(0.97)PLPPLPEDEEGSEVTNSK;ERECS(0.157)PS(0.198)S(0.645)PLPPLPEDEEGSEVTNSK 158.75 3.24E-14 69662000 4074.4 4543.1 3952.1 3709.4 4150.8 3959.7 3882.9 4083.4 3452.3 3159 TRUE FALSE 3727.850884 4247.343364 3683.842463 3995.098631 3985.464847 4183.894792 3623.878826 4047.699264 3811.178939 3550.360769 1.049992135 1.196313175 1.037596656 1.125265541 1.122552074 1.178442154 1.020707207 1.140081115 1.073462441 1 11.79374992 -9.144014035 0.764234083 0.998244981 1.112717797 0.257535479 0.055348332 2.942793345 2.503318006 0.061031787 0.018227082 7.18E-10 9.144014035 0.114472816 EREDES(ph)EDESDILEESPCGR ddPTM_A459_MK2206_30min_R2 2 EREDESEDESDILEESPCGR 20 1 Q9NSY0 Q9NSY0 NRBP2 Nuclear receptor-binding protein 2 1 EREDES(0.99)EDES(0.01)DILEESPCGR;EREDES(0.992)EDES(0.008)DILEESPCGR 142.56 2.70E-05 25198000 51631 64669 51970 61390 59328 62464 58529 50444 54415 52707 TRUE FALSE 55583.90906 61457.6315 53702.65386 56374.24062 56998.48462 64841.11129 50844.07199 57037.204 59147.91834 50987.17491 1.090154714 1.205354711 1.053258078 1.105655309 1.117898466 1.27171414 0.997193355 1.118657861 1.160054827 1 15.63784678 -10.99884367 3.207550469 0.997424106 1.124398715 0.210185661 0.07236604 51870997.34 58632805.34 1175781.309 0.017568622 1.00E-11 10.99884367 0.126974609 EREDS(ph)GDAEAHAFK ddPTM_A459_MK2206_30min_R1 2 EREDSGDAEAHAFK 14 1 Q9NPI1-2;Q9NPI1 Q9NPI1-2 BRD7 Bromodomain-containing protein 7 1 EREDS(1)GDAEAHAFK;EREDS(1)GDAEAHAFK 103.41 0.0037972 24102000 7971.5 8368.9 8618.7 7593.4 8378 7112 8662.2 8080.6 7762.6 7775.5 TRUE FALSE 7293.482065 7824.083089 8033.686657 8178.244984 8044.286519 7514.675294 8084.360443 8009.952166 8569.550049 8738.787642 0.834610287 0.895328209 0.919313638 0.935855787 0.920526605 0.859921948 0.925112358 0.916597644 0.980633745 1 13.09321743 -14.52287873 0.034226469 1.524791423 0.582531401 0.590509811 0.02991977 910.1068536 2.329252514 53.22661387 18.94917005 3.00E-15 14.52287873 -0.942260022 EREDSGDAEAHAFKS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 EREDSGDAEAHAFKSPSK 18 2 Q9NPI1-2;Q9NPI1 Q9NPI1-2 BRD7 Bromodomain-containing protein 7 1 EREDSGDAEAHAFKS(0.807)PS(0.193)K 56.514 0.025812 6051800 69719 55658 50599 52616 52564 34727 81053 56093 38725 75096 TRUE FALSE 75056.74024 52894.10465 52285.94541 48317.10449 50500.07325 36048.56032 70410.64374 63424.5477 42093.2305 72645.62367 1.033190115 0.728111371 0.719739783 0.665106885 0.695156442 0.496224803 0.969234486 0.873067702 0.579432433 1 16.14858827 -9.946008232 10.95157977 1 0.747777457 0.183025359 0.157669367 0 0 0.153143078 0.037142652 1.13E-10 9.946008232 -0.252222543 EREDSGDAEAHAFKSPS(ph)K ddPTM_A459_MK2206_30min_R2 1 EREDSGDAEAHAFKSPSK 18 2 Q9NPI1-2;Q9NPI1 Q9NPI1-2 BRD7 Bromodomain-containing protein 7 1 EREDSGDAEAHAFKS(0.357)PS(0.643)K 47.223 0.044142 13914000 79351 88912 82415 61035 71679 53836 87564 65742 58915 101400 TRUE FALSE 85426.17357 84496.75937 85162.67497 56048.24526 68864.5223 55884.7667 76066.74162 74334.70513 64039.32021 98091.3263 0.870884071 0.861409082 0.868197813 0.571388393 0.702044971 0.569721797 0.775468581 0.757811194 0.652854056 1 16.58183795 -5.722708882 24.88562874 0.703871395 0.866288535 0.250363485 0.115728285 188.3685694 121031.6131 0.029679547 0.051405311 1.89E-06 5.722708882 0.162417141 EREES(ph)EDELEEANGNNPIDIEVDQNK ddPTM_A459_MK2206_30min_R1 2 EREESEDELEEANGNNPIDIEVDQNK 26 1 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK 137.67 1.90E-09 32448600 1697.01 1954.01 1978.24 1547.56 1624.33 1445.36 1836.46 1511.38 1791.07 1661.11 TRUE FALSE 1552.670388 1826.803594 1843.96258 1666.753339 1559.629497 1527.195034 1713.953104 1498.166164 1977.258136 1866.900848 0.83168337 0.978522023 0.987713184 0.89279157 0.835410996 0.818037571 0.918073987 0.802488341 1.05911256 1 10.86642959 -8.27575961 24.99774224 1.029556305 0.887490414 0.46751188 0.062384062 878.0297763 1532694.809 0.062534461 0.016441269 5.30E-09 8.27575961 -0.142065891 EREES(ph)EDELEEANGNNPIDIEVDQNK ddPTM_A459_MK2206_30min_R2 6 EREESEDELEEANGNNPIDIEVDQNK 26 1 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK 137.05 1.85E-09 120244300 277483.4 298245.7 293972.3 317531.1 300121.8 261134.8 336491.8 247090.4 250432.4 305966.5 TRUE FALSE 298727.7425 283435.2522 303773.1898 291587.7934 288337.5101 271072.4678 292310.0225 279385.9637 272214.5575 295982.8382 1.009273863 0.957607049 1.026320281 0.985151015 0.974169691 0.915838464 0.987591119 0.943926227 0.919697099 1 18.175154 -6.427053009 3.485641762 0.951556193 0.99411278 0.294623453 0.029610238 0.302747851 6.882222699 0.009314144 0.010482364 3.74E-07 6.427053009 0.042556587 EREES(ph)EDELEEANGNNPIDIEVDQNKESK ddPTM_A459_MK2206_30min_R1 1 EREESEDELEEANGNNPIDIEVDQNKESK 29 2 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 EREES(1)EDELEEANGNNPIDIEVDQNKESK 89.159 1.05E-06 13829000 389.29 439.44 471.29 667.33 591.41 551.63 357.9 465.15 250.51 130.85 TRUE FALSE 356.1788413 410.8323761 439.3001479 718.7278722 567.8528874 582.8628139 334.025144 461.0832426 276.551411 147.0606859 2.421985449 2.793624779 2.987203176 4.887287639 3.861350734 3.963416942 2.271342215 3.135326344 1.88052578 1 7.200267808 -8.351467941 1.054710593 1.007200449 3.450331357 0.531371636 0.729233445 0.422586551 1.000219347 0.748980152 0.250120465 4.45E-09 8.351467941 2.443130907 ERELEEAR ddPTM_A459_MK2206_30min_R1 1 ERELEEAR 8 1 Q9Y490;H0YMT1;A0A1B0GVU7;Q9Y4G6 Q9Y490;H0YMT1 TLN1;TLN2 Talin-1;Talin-2 0 115.49 0.027659 4120000 2021.1 2036.1 2126 1908.5 2051.7 1780.8 1935.3 2313.1 842.56 1596.9 FALSE TRUE 1849.194832 1903.54952 1981.693043 2055.493001 1969.976444 1881.627357 1806.199668 2292.876811 930.1471271 1794.736028 1.030343629 1.060629246 1.104169645 1.145289875 1.097641332 1.048414545 1.006387368 1.277556574 0.51826403 1 10.80955595 -8.255570773 24.99924838 0.759132012 1.092460953 0.52048266 0.129410447 312.4917681 1331175.666 0.084638829 0.030073496 5.55E-09 8.255570773 0.333328941 EREMAEMR ddPTM_A459_MK2206_30min_R1 1 EREMAEMR 8 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 96.668 0.026704 0 1207.8 1468.2 1015.5 1153.8 1273.3 1158.7 1233.4 1166.9 836.25 861.1 FALSE TRUE 1105.070268 1372.619913 946.5706893 1242.665876 1222.581765 1224.304593 1151.122136 1156.697916 923.18118 967.779569 1.141861539 1.418318755 0.97808501 1.284038138 1.263285364 1.26506555 1.189446619 1.195208034 0.95391679 1 9.918534672 -8.21681298 4.916524584 0.975331046 1.221692738 0.446320789 0.106959432 0.164099277 9.289162392 0.077214348 0.026163919 6.07E-09 8.21681298 0.246361692 ERESSANNSVS(ph)PSESLR ddPTM_A459_MK2206_30min_R1 4 ERESSANNSVSPSESLR 17 1 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 ERESSANNSVS(0.881)PS(0.118)ESLR;ERESSANNSVS(0.996)PS(0.004)ESLR;ERESSANNSVS(0.908)PS(0.092)ESLR;ERESSANNSVS(0.997)PS(0.003)ESLR 261.06 1.36E-39 16792500 3779.14 4087.81 3935.4 3678.19 4242.54 3495.02 4016.99 3906.34 3119.35 2781.43 TRUE FALSE 3457.704298 3821.692826 3668.276013 3961.484831 4073.550648 3692.905012 3749.023927 3872.187281 3443.617595 3126.014547 1.106106272 1.222544799 1.173467352 1.267263722 1.303113145 1.181346074 1.199298298 1.23869778 1.10159999 1 11.61010878 -8.500425131 3.165180213 1.00064335 1.213887594 0.636619949 0.051308577 0.140386493 3.349676996 0.050485313 0.013428515 3.16E-09 8.500425131 0.213244243 ERESSANNSVS(ph)PSESLR ddPTM_A459_MK2206_30min_R2 2 ERESSANNSVSPSESLR 17 1 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 ERESSANNS(0.11)VS(0.88)PS(0.007)ES(0.002)LR;ERESSANNS(0.003)VS(0.778)PS(0.217)ES(0.002)LR 79.467 0.0097086 12523100 55233 65324 58041 65170 63736 61051 59830 52112 51594 67660 TRUE FALSE 59461.68095 62080.10515 59976.05797 59845.40253 61233.40439 63374.33859 51974.24913 58923.21733 56081.55286 65452.25974 0.908474072 0.948479172 0.916332885 0.91433669 0.935543015 0.968252874 0.794078758 0.900247257 0.856831423 1 15.99815538 EREVDEDS(ph)EPER ddPTM_A459_MK2206_30min_R1 5 EREVDEDSEPER 12 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EREVDEDS(1)EPER;EREVDEDS(1)EPER;EREVDEDS(1)EPER;EREVDEDS(1)EPER;EREVDEDS(1)EPER 166.79 0.00036837 50950000 10999.97 10810.71 10236.39 7935.5 9340.61 9205.84 11229.5 9811.8 10276.18 11137.51 TRUE FALSE 10064.36479 10106.93081 9541.572367 8546.693585 8968.553725 9727.066705 10480.40054 9726.016467 11344.42568 12517.30882 0.80403583 0.807436403 0.762270269 0.682790023 0.716492167 0.777089296 0.837272667 0.777005393 0.906299097 1 13.6116368 -8.467233393 0.961930743 1.001772648 0.758262425 0.766695917 0.041955553 0.294551285 0.602229156 0.044241779 0.015080028 3.41E-09 8.467233393 -0.243510223 EREVDEDS(ph)EPER ddPTM_A459_MK2206_30min_R2 2 EREVDEDSEPER 12 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EREVDEDS(1)EPER;EREVDEDS(1)EPER 102.39 0.0064109 23521000 19988.9 23762.8 19185.4 26252 20391.2 20917 24764.4 18381.8 17576.1 22948.8 TRUE FALSE 21519.26555 22582.77391 19825.03166 24107.12762 19590.53903 21713.01109 21512.80453 20784.36437 19104.83741 22199.98254 0.969337049 1.017242868 0.893020147 1.085907504 0.882457407 0.978064332 0.969046012 0.936233366 0.860578939 1 14.43827092 -6.869661123 0.914206296 0.932705876 0.981212903 0.066859473 0.062727588 1.548952053 2.758301576 0.038887904 0.032159957 1.35E-07 6.869661123 0.048507027 EREVEER ddPTM_A459_MK2206_30min_R2 1 EREVEER 7 1 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 107.01 0.047565 2287600 4703.1 935.52 2469.4 1318.1 4141.5 4792.6 4043.3 30385 14042 4580.7 FALSE TRUE 5063.172952 889.0634372 2551.728564 1210.407014 3978.883901 4974.985751 3512.409853 34356.42383 15263.34778 4431.232134 1.142610633 0.200635717 0.575850799 0.273153601 0.897918182 1.122709351 0.792648579 7.753243971 3.444492935 1 12.11349219 -7.651890753 12.20455533 4.447110007 0.688111371 0.483961769 1.571040119 0.308467298 32.33581424 0.686461355 0.396119782 2.23E-08 7.651890753 -3.758998635 ERHPGSFDVVHVK ddPTM_A459_MK2206_30min_R1 1 ERHPGSFDVVHVK 13 1 P62701;C9JEH7;P22090 P62701 RPS4X;RPS4Y1 "40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1" 0 69.03 0.027085 8760000 6244.8 4284.5 5082.4 4283.1 7536.4 7200.5 7156.6 5694.1 4383.2 4204.3 FALSE TRUE 5713.646967 4005.578271 4737.420848 4612.985104 7236.209229 7608.186087 6679.196272 5644.317084 4838.849325 4725.160425 1.209196398 0.847712651 1.002594711 0.976259997 1.531420857 1.610143446 1.41353852 1.194523905 1.024060326 1 12.2061476 -6.239289039 24.63367591 1.326963352 0.99697128 0.31571875 0.203337855 764.6094929 850331.5745 0.06333777 0.081696885 5.76E-07 6.239289039 -0.329992073 ERHPS(ph)WR ddPTM_A459_MK2206_30min_R2 1 ERHPSWR 7 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 ERHPS(1)WR 70.399 0.03686 622140000 113900 132770 129000 123910 135110 130440 131940 108770 87847 132240 TRUE FALSE 122620.2716 126176.8349 133300.7956 113786.1566 129804.9025 135403.9856 114616.1195 122986.6125 95487.77327 127925.0196 0.958532365 0.986334301 1.042022866 0.889475389 1.014695193 1.058463669 0.895963275 0.96139608 0.746435479 1 16.96493893 -7.294751698 23.76934943 0.897731659 0.990049959 0.258095329 0.075177823 496.3767333 354177.1116 0.030349342 0.020463621 5.07E-08 7.294751698 0.092318299 ERIQQFDDGGS(ph)DEEDIWEEK ddPTM_A459_MK2206_30min_R1 1 ERIQQFDDGGSDEEDIWEEK 20 1 E9PQP7;Q5H9R7-2;Q5H9R7;Q5H9R7-5;H0YEN2;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-3 E9PQP7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 ERIQQFDDGGS(1)DEEDIWEEK 117.29 0.0020292 0 1163 1009.4 985.26 1218.2 929.36 723.24 794.68 891.61 757.54 596.75 TRUE FALSE 1064.080743 943.6878765 918.3832963 1312.025975 892.3416232 764.1892238 741.6683472 883.8147478 836.2889939 670.6798952 1.586570211 1.407061526 1.369331782 1.956262569 1.330503016 1.139424678 1.105845505 1.317789238 1.246927185 1 9.389480545 -6.51425663 23.65509159 1.184640018 1.563802336 0.577925298 0.167595714 160.8575163 441320.9243 0.054603689 0.057350888 3.06E-07 6.51425663 0.379162318 ERLDDWDR ddPTM_A459_MK2206_30min_R2 1 ERLDDWDR 8 1 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 0 101.46 0.047948 4024800 11456 12392 14705 14558 13502 14927 11873 11566 10194 13000 FALSE TRUE 12333.08017 11776.6313 15195.25736 13368.56483 12971.84364 15495.05744 10314.06084 13077.71591 11080.65569 12575.81106 0.980698589 0.936451036 1.208292434 1.063037983 1.031491613 1.232131857 0.820150747 1.039910336 0.881108633 1 13.61836383 -7.27247132 24.99458967 0.938618304 1.072526532 0.311201333 0.101979795 993.3320043 2250539.958 0.042083814 0.028682984 5.34E-08 7.27247132 0.133908228 ERLELCDER ddPTM_A459_MK2206_30min_R2 1 ERLELCDER 9 1 P07919 P07919 UQCRH "Cytochrome b-c1 complex subunit 6, mitochondrial" 0 104.43 0.040441 1852100 20327 15741 16224 18517 18214 21869 23278 15442 21818 15805 FALSE TRUE 21883.25075 14959.32483 16764.90006 17004.10187 17498.82684 22701.24012 20221.57064 17460.32242 23715.6902 15289.28414 1.431280271 0.978418917 1.096513081 1.112158143 1.144515772 1.484781099 1.322597608 1.141997379 1.551131497 1 13.90023324 -6.576021022 24.95530673 1.310856801 1.136669569 0.138511268 0.180919037 160.2388849 75245.98252 0.056615924 0.056615931 2.65E-07 6.576021022 -0.174187232 ERLNS(ph)SENGEDR ddPTM_A459_MK2206_30min_R1 1 ERLNSSENGEDR 12 1 Q7L4I2;H0YGP9;E1B6W4;Q7L4I2-2 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 ERLNS(0.98)S(0.02)ENGEDR 73.802 0.029217 6247300 1797.3 2103.1 1677.3 1403.8 1995.9 1524.7 1932.4 1565.9 1302.2 1452.3 TRUE FALSE 1644.430197 1966.187808 1563.449549 1511.920919 1916.399077 1611.027196 1803.493122 1552.209501 1437.56835 1632.221888 1.007479564 1.204608161 0.957865815 0.926296192 1.174104508 0.987014822 1.104931342 0.950979467 0.880743213 1 10.67262148 -7.870960083 6.602861896 0.932972094 1.051183272 0.234953941 0.088975934 0.300790341 16.27453328 0.048592752 0.023107352 1.35E-08 7.870960083 0.118211177 ERLNSS(ph)ENGEDR ddPTM_A459_MK2206_30min_R2 2 ERLNSSENGEDR 12 1 Q7L4I2;H0YGP9;E1B6W4;Q7L4I2-2 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 ERLNS(0.201)S(0.799)ENGEDR;ERLNS(0.191)S(0.809)ENGEDR 157.35 0.002107 28235000 49302 64114 53672 52528 51201 44837 50029 40604 35328 37077 TRUE FALSE 53076.59903 60930.19199 55461.39769 48236.29437 49190.59148 46543.30345 43460.1322 45911.08221 38400.76558 35867.18053 1.479809627 1.698772836 1.546299343 1.344858828 1.371465244 1.297657155 1.211696363 1.280030422 1.070637976 1 15.13037672 -6.477577833 0.307234485 0.985415112 1.766185 0.849128055 0.077768831 0.996507463 0.171245635 0.102462402 0.27651124 3.33E-07 6.477577833 0.780769888 ERLPS(ph)VDLK ddPTM_A459_MK2206_30min_R2 1 ERLPSVDLK 9 1 H7BZK4;Q8WUM9 H7BZK4 SLC20A1 Sodium-dependent phosphate transporter 1 1 ERLPS(1)VDLK 77.894 0.029067 4854600 33332 23093 27081 19017 15610 13686 24399 17428 15338 24610 TRUE FALSE 35883.92355 21946.2352 27983.86702 17463.25027 14997.07297 14206.83032 21195.38199 19705.89944 16672.07152 23806.97772 1.507285972 0.921840456 1.175448113 0.733534952 0.629944428 0.596750688 0.890301249 0.827736291 0.700301891 1 14.53909686 ERNQAS(ph)WS(ph)SSRRS(ph)T(ph)STT(ph)GK ddPTM_A459_MK2206_30min_R1 1 ERNQASWSSSRRSTSTTGK 19 3 P08912 P08912 CHRM5 Muscarinic acetylcholine receptor M5 5 ERNQAS(0.929)WS(0.534)S(0.534)S(0.03)RRS(0.672)T(0.572)S(0.572)T(0.572)T(0.586)GK 45.618 0.047871 0 0 0 84.065 186.05 0 0 0 0 0 0 TRUE FALSE 0 0 78.35890202 200.3796032 0 0 0 0 0 0 0 ERPDLEAPAPGS(ph)PFR ddPTM_A459_MK2206_30min_R1 4 ERPDLEAPAPGSPFR 15 1 Q9NQT8;H0YBA8;Q9NQT8-2 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR 136.81 0.00022228 152159000 11155.3 10028.8 10172.2 8639.1 11731.5 10691.7 12236.1 10373.4 9741.6 10189.1 TRUE FALSE 10206.48316 9375.923297 9481.739405 9304.484979 11264.20951 11297.05481 11419.8521 10282.70646 10754.27418 11451.40263 0.891286726 0.818757632 0.827998081 0.812519241 0.983653258 0.986521492 0.997244832 0.897942967 0.939122877 1 13.4832367 -6.262566609 24.99856373 0.964758281 0.835602908 0.767525093 0.034963718 51.43302044 1140626.217 0.011224263 0.013447613 5.46E-07 6.262566609 -0.129155374 ERPDLEAPAPGS(ph)PFR ddPTM_A459_MK2206_30min_R2 4 ERPDLEAPAPGSPFR 15 1 Q9NQT8;H0YBA8;Q9NQT8-2 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR 138.28 0.000219 188729000 138470 146761 156545 153592 143633 141563 142036 106927 124635 136001 TRUE FALSE 149071.3697 139473.0622 161764.1322 141043.0423 137993.2467 146950.2792 123386.5026 120902.726 135475.527 131563.2985 1.133077168 1.060121354 1.229553637 1.072054622 1.048873419 1.116954963 0.937848959 0.918970012 1.029736473 1 17.00539756 -7.256851916 24.92803798 0.96488636 1.108750392 0.597816405 0.055522055 257.9932657 1401926.711 0.021916661 0.01638998 5.54E-08 7.256851916 0.143864032 ERPES(ph)PMVPSEQVVEEAVPLPPQALTTSQDGHR ddPTM_A459_MK2206_30min_R1 7 ERPESPMVPSEQVVEEAVPLPPQALTTSQDGHR 33 1 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 ERPES(0.851)PMVPS(0.149)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.967)PMVPS(0.033)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.929)PMVPS(0.071)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.992)PMVPS(0.008)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.971)PMVPS(0.029)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.977)PMVPS(0.023)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.997)PMVPS(0.003)EQVVEEAVPLPPQALTTSQDGHR 108.52 3.81E-14 111933000 9371.2 5886.09 7734.49 5418.9 11572.46 11452.86 11206.72 8621.73 6097.06 6030.93 TRUE FALSE 8574.13023 5502.904471 7209.494368 5836.264617 11111.50441 12101.31104 10459.14016 8546.351124 6730.871206 6778.08714 1.26497787 0.811866882 1.063647342 0.861048921 1.639327466 1.785357843 1.543081395 1.2608795 0.993034033 1 12.72666247 -6.253314575 24.85560209 1.412717975 0.991438367 0.310034059 0.265709998 664.4967786 2032843.685 0.08287515 0.105091923 5.58E-07 6.253314575 -0.421279608 ERPES(ph)PMVPSEQVVEEAVPLPPQALTTSQDGHR ddPTM_A459_MK2206_30min_R2 7 ERPESPMVPSEQVVEEAVPLPPQALTTSQDGHR 33 1 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 ERPES(0.914)PMVPS(0.086)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.953)PMVPS(0.047)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.983)PMVPS(0.017)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.96)PMVPS(0.04)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.993)PMVPS(0.007)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.969)PMVPS(0.031)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.963)PMVPS(0.037)EQVVEEAVPLPPQALTTSQDGHR 92.901 2.95E-09 82763400 97137.7 155883.6 129086.3 211258.8 212121.9 252127.6 203320.6 144582 201786.6 137983.7 TRUE FALSE 104574.637 148142.6471 133389.9728 193998.2803 203792.9284 261722.4925 176624.361 163479.3638 219337.6337 133481.3032 0.783440336 1.109838184 0.999315782 1.453374185 1.526752613 1.960742713 1.323214239 1.224736049 1.643208663 1 17.02627815 -5.759834031 4.985986225 1.478887669 0.972065753 0.433154454 0.25183773 0.166528355 11.33275929 0.07091118 0.116634311 1.74E-06 5.759834031 -0.506821916 ERPGLGSENMDR ddPTM_A459_MK2206_30min_R1 2 ERPGLGSENMDR 12 1 Q86XP3-2;Q86XP3;A0A0A0MSJ0 Q86XP3-2 DDX42 ATP-dependent RNA helicase DDX42 0 ; 116.74 0.013916 10830100 4027.4 4177.5 4222.5 3464.4 4582.5 4139.8 4569.5 3920.4 2786.9 3638.4 FALSE TRUE 3684.848481 3905.543991 3935.888465 3731.228688 4399.969321 4374.191898 4264.676993 3886.124356 3076.608228 4089.152461 0.901127683 0.955098649 0.962519374 0.912469937 1.076010094 1.069706239 1.042924428 0.950349588 0.752382861 1 11.99758614 -8.01292372 24.33242586 0.867916339 0.990308847 0.236958143 0.079520636 557.8574582 1050311.25 0.049961389 0.020857767 9.71E-09 8.01292372 0.122392509 ERPIS(ph)LGIFPLPAGDGLLT(ph)PDAQK ddPTM_A459_MK2206_30min_R1 1 ERPISLGIFPLPAGDGLLTPDAQK 24 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3;D6RHI8 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 ERPIS(1)LGIFPLPAGDGLLT(1)PDAQK 91.507 0.00014433 3029400 858.1 1179.5 1299.2 1291.3 998.28 1088 1160.3 1123.6 972.97 914.15 TRUE FALSE 785.1140889 1102.714336 1211.013924 1390.75615 958.5163937 1149.60162 1082.898504 1113.776484 1074.113713 1027.401803 0.764174334 1.073303874 1.178715007 1.353663333 0.932951831 1.118940629 1.05401655 1.084070984 1.045466058 1 10.0047848 -10.10564173 15.0943798 0.999987459 1.07681088 0.015322662 0.144502862 0 0 0.141267206 0.03426233 7.84E-11 10.10564173 0.076823421 ERPISLGIFPLPAGDGLLT(ph)PDAQK ddPTM_A459_MK2206_30min_R1 1 ERPISLGIFPLPAGDGLLTPDAQK 24 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3;D6RHI8 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 ERPISLGIFPLPAGDGLLT(1)PDAQK 112.9 3.34E-07 2038700 616.44 697.68 670.72 721.91 800.41 483.29 524.31 637.02 603 581.19 TRUE FALSE 564.0085409 652.2609052 625.1933951 777.5116333 768.5279748 510.6534621 489.3342366 631.4506013 665.6840079 653.192205 0.863464898 0.998574233 0.95713542 1.190325952 1.176572484 0.781781317 0.749142799 0.966714845 1.019124238 1 9.351363764 -6.768016951 24.99991392 0.891634223 1.039125255 0.230761054 0.121236201 243.0082874 923615.504 0.045951932 0.0414608 1.71E-07 6.768016951 0.147491032 ERPISLGIFPLPAGDGLLT(ph)PDAQK ddPTM_A459_MK2206_30min_R2 2 ERPISLGIFPLPAGDGLLTPDAQK 24 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3;D6RHI8 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 ERPISLGIFPLPAGDGLLT(1)PDAQK;ERPISLGIFPLPAGDGLLT(1)PDAQK 161.04 1.03E-12 407450000 1317710 1600730 1645590 1446060 1662310 1333700 1670040 1277930 1296930 1599250 TRUE FALSE 1418594.891 1521240.076 1700453.149 1327912.272 1597039.357 1384454.888 1450761.742 1444959.839 1409734.627 1547066.603 0.916957866 0.983306131 1.099146698 0.858342019 1.032301617 0.894890294 0.937750022 0.933999762 0.911230728 1 20.56110388 -5.774453692 24.99999359 0.9376869 0.998153862 0.169873133 0.062199985 392.1286472 753263.4187 0.016923955 0.02528099 1.68E-06 5.774453692 0.060466962 ERPLQQVS(ph)PVASVPWR ddPTM_A459_MK2206_30min_R1 1 ERPLQQVSPVASVPWR 16 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 ERPLQQVS(0.956)PVAS(0.044)VPWR 88.945 0.0074478 15710000 1707.9 1761.2 1596.1 1309.9 1491.6 1468.6 1500.1 1323.2 1241.2 910.29 TRUE FALSE 1562.634136 1646.54556 1487.761179 1410.788725 1432.186413 1551.750863 1400.031066 1311.631402 1370.227182 1023.063598 1.527406644 1.609426397 1.454221597 1.378984384 1.39989969 1.51676872 1.368469242 1.28206243 1.339337246 1 9.998680116 -12.80340324 0.105967155 3.85E-14 1.747005972 0.857297909 0.060224897 40.98334583 0.431285016 10.22103212 1.032974595 1.57E-13 12.80340324 1.747005972 ERPLQQVS(ph)PVASVPWR ddPTM_A459_MK2206_30min_R2 1 ERPLQQVSPVASVPWR 16 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 ERPLQQVS(0.962)PVAS(0.038)VPWR 70.501 0.023325 12360000 23039 29266 29926 27911 23979 22963 26211 22579 25248 27519 TRUE FALSE 24802.88355 27812.693 30923.7179 25630.58202 23037.46398 23836.87306 22769.46421 25530.15283 27444.0254 26621.05728 0.931701671 1.0447629 1.161626211 0.962793541 0.865385012 0.895414213 0.855317802 0.959020994 1.030914179 1 14.70028025 -5.985612044 24.97902174 0.925276727 1.048621287 0.313300984 0.073286936 262.3956401 455543.0145 0.021374641 0.031689041 1.03E-06 5.985612044 0.123344561 ERPS(ph)GPESPVQGPR ddPTM_A459_MK2206_30min_R1 2 ERPSGPESPVQGPR 14 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 ERPS(0.833)GPES(0.167)PVQGPR;ERPS(0.85)GPES(0.15)PVQGPR 158.65 0.0014438 20547500 3103.7 3321.33 3388.97 3148.83 3725.3 3455.34 3972.64 2752.42 2825.83 2587.76 TRUE FALSE 2839.714017 3105.110813 3158.936159 3391.353432 3576.913413 3650.978365 3707.632434 2728.355882 3119.585141 2908.351245 0.976399952 1.067653303 1.086160471 1.166074228 1.229876693 1.255342996 1.274822785 0.938110858 1.072630118 1 11.5059858 -7.77520333 24.99997712 1.004027867 1.152849974 0.353252235 0.091322705 304.340147 552776.0231 0.055228281 0.026747991 1.68E-08 7.77520333 0.148822106 ERPS(ph)SAIYPSDSFR ddPTM_A459_MK2206_30min_R2 1 ERPSSAIYPSDSFR 14 1 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ERPS(0.888)S(0.112)AIYPSDSFR 136.26 0.0028321 7487300 15271 21633 16715 21950 20400 19320 22286 14716 19110 17290 TRUE FALSE 16440.1595 20558.73668 17272.26976 20156.61479 19598.9935 20055.23614 19359.82143 16639.43173 20772.15326 16725.82872 0.982920475 1.22916102 1.032670491 1.205119048 1.171780115 1.199057845 1.15748055 0.994834517 1.241920721 1 14.02979007 -10.73592514 4.460577851 0.999957899 1.136321704 0.162513175 0.091890326 3.59E-05 6.34E-06 0.083056321 0.020137901 1.84E-11 10.73592514 0.136363805 ERPSGPES(ph)PVQGPR ddPTM_A459_MK2206_30min_R1 3 ERPSGPESPVQGPR 14 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 ERPS(0.027)GPES(0.973)PVQGPR;ERPS(0.001)GPES(0.999)PVQGPR;ERPS(0.004)GPES(0.996)PVQGPR 169.02 0.00088038 25132900 5315.77 4842.25 4362.67 4122.85 5793.38 5140.82 6138.71 4750.09 4106.06 3840.31 TRUE FALSE 4863.635847 4527.018645 4066.544115 4440.392621 5562.617407 5431.888786 5729.207857 4708.560464 4532.899631 4316.076596 1.126865045 1.048873565 0.942185345 1.028803017 1.288813413 1.25852465 1.327411071 1.090935334 1.050236142 1 12.07550475 -6.232959638 23.49387481 1.186231639 1.030802772 0.259240117 0.107401529 437.1849911 360647.4668 0.033260869 0.042927818 5.85E-07 6.232959638 -0.155428867 ERPSGPES(ph)PVQGPR ddPTM_A459_MK2206_30min_R2 1 ERPSGPESPVQGPR 14 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 ERPS(0.007)GPES(0.993)PVQGPR 149.99 0.0020395 16542000 12089 18958 16427 16872 14866 18606 20833 11325 13769 14380 TRUE FALSE 13014.54313 18016.57329 16974.66798 15493.50363 14282.28614 19314.06437 18097.60208 12805.21638 14966.60273 13910.78178 0.935572374 1.295151745 1.220252625 1.113776629 1.026706218 1.388424078 1.300976636 0.920524568 1.075899469 1 13.76391588 -7.767916273 24.99893014 0.998659009 1.187957395 0.291424284 0.131441901 203.4679946 785310.5658 0.07072841 0.035251746 1.71E-08 7.767916273 0.189298386 ERPSS(ph)AIYPSDSFR ddPTM_A459_MK2206_30min_R1 2 ERPSSAIYPSDSFR 14 1 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ERPS(0.082)S(0.918)AIYPSDSFR;ERPS(0.084)S(0.916)AIYPSDSFR 167.18 0.0010409 23056100 6464.4 6201.7 5579.9 5370.4 6586.7 5762.9 6458.7 5142.1 5419.3 5097.9 TRUE FALSE 5914.568834 5797.968203 5201.151934 5784.029139 6324.337791 6089.190418 6027.851908 5097.143162 5982.655628 5729.466339 1.032307109 1.011956064 0.907789945 1.00952319 1.103826677 1.062784919 1.052079121 0.889636636 1.044190728 1 12.48418505 -3.804662492 2.84798483 1.008813414 3.781703065 0.012024028 0.062899821 1698.958909 134.4924155 0.017200198 30015.58118 0.000156797 3.804662492 2.772889651 ERPVS(ph)EMFSLEDSIIER ddPTM_A459_MK2206_30min_R1 5 ERPVSEMFSLEDSIIER 17 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 ERPVS(0.999)EMFS(0.001)LEDSIIER;ERPVS(1)EMFSLEDSIIER;ERPVS(1)EMFSLEDSIIER;ERPVS(1)EMFSLEDSIIER;ERPVS(1)EMFSLEDSIIER 146.18 0.00092785 17093200 1679.28 1788.4 1840.47 1806.7 2211.68 1906.29 1615.75 1701.5 1660.31 1357.8 TRUE FALSE 1536.448418 1671.974835 1715.544024 1945.852347 2123.584102 2014.222492 1507.966266 1686.623965 1832.905166 1526.014515 1.006837355 1.095648055 1.124199021 1.275120471 1.391588403 1.319923548 0.98817295 1.105247656 1.201105984 1 10.57555297 -9.051538373 0.696570226 1.000458572 1.182068704 0.133137839 0.125020145 4.085694084 3.240285732 0.164705603 0.052627439 8.88E-10 9.051538373 0.181610132 ERQEQEEARR ddPTM_A459_MK2206_30min_R2 1 ERQEQEEARR 10 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 0 131.52 0.0016467 3260300 3740.7 2576.1 2807.4 3685.7 4185.6 4142.3 3223.8 11754 8934.9 2622.9 FALSE TRUE 4027.090868 2448.17462 2900.997315 3384.56652 4021.252313 4299.938129 2800.511188 13290.28816 9712.041451 2537.314988 1.587146605 0.96486823 1.143333535 1.333916576 1.584845529 1.694680459 1.103730203 5.237933887 3.827684579 1 11.30908691 -7.738180109 24.99752815 3.649607384 1.344584343 0.45001741 1.002838894 163.368447 175577.9032 0.444300264 0.256316271 1.83E-08 7.738180109 -2.305023041 ERQTNPSAMEVEEDDPVPEIR ddPTM_A459_MK2206_30min_R1 1 ERQTNPSAMEVEEDDPVPEIR 21 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 113.23 0.00023654 2738600 540.69 544.28 475.5 296.07 617.6 357.99 396.38 524.48 298.08 276.54 FALSE TRUE 494.7014762 508.8472731 443.2243848 318.8733627 592.9996842 378.2590844 369.9382134 519.8945267 329.0664827 310.799863 1.591704293 1.63721846 1.426076513 1.025976523 1.907979233 1.217050358 1.190277917 1.67276305 1.058772934 1 8.279842057 -11.99880053 0.078649899 2.87E-09 1.94954423 0.264284421 0.259105348 208.9709399 2.016862208 48.78581502 11.59030229 1.00E-12 11.99880053 1.949544227 ERS(ph)DSGGSSSEPFDR ddPTM_A459_MK2206_30min_R2 1 ERSDSGGSSSEPFDR 15 1 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 ERS(0.607)DS(0.391)GGS(0.001)S(0.001)SEPFDR 78.441 0.018134 18755000 13217 15471 13495 18740 14439 18519 16582 14365 13803 15053 TRUE FALSE 14228.90368 14702.73264 13944.91656 17208.88205 13872.05231 19223.75352 14404.76348 16242.55482 15003.55999 14561.82184 0.977137602 1.009676728 0.957635433 1.18178084 0.952631646 1.320147556 0.989214374 1.115420515 1.030335363 1 13.82990324 -5.735967006 24.99997076 1.089416909 0.984302558 0.174165189 0.102023054 375.4047088 368439.7217 0.025913428 0.044862024 1.84E-06 5.735967006 -0.105114351 ERS(ph)GSESSVDQK ddPTM_A459_MK2206_30min_R2 1 ERSGSESSVDQK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ERS(0.977)GS(0.021)ESS(0.002)VDQK 109.95 0.035233 2616500 9128.3 8414 8126.5 8709 9127.4 8076.6 9532.2 11970 10180 11099 TRUE FALSE 9827.169666 7996.172995 8397.433454 7997.446841 8769.012414 8383.960673 8280.61069 13534.5201 11065.438 10736.84054 0.91527574 0.744741711 0.782114014 0.744860354 0.816721864 0.780859196 0.771233461 1.260568232 1.03060467 1 13.3902819 -7.746064577 24.99746629 1.109189828 0.789873641 0.756567199 0.078747743 94.48642565 153623.3697 0.03464204 0.019907424 1.79E-08 7.746064577 -0.319316188 ERS(ph)PALKS(ph)PLQSVVVR ddPTM_A459_MK2206_30min_R2 1 ERSPALKSPLQSVVVR 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 ERS(1)PALKS(1)PLQSVVVR 107.69 0.023773 0 30712 30925 31855 32793 30759 21296 32238 23462 25148 32620 TRUE FALSE 33063.33433 29389.30947 32917.0298 30113.707 29551.24711 22106.4342 28005.11188 26528.56396 27335.32758 31555.61207 1.047779845 0.931349688 1.043143442 0.954305907 0.936481506 0.700554759 0.88748435 0.840692423 0.86625883 1 14.94560899 -6.532703087 24.9921417 0.847232438 0.987188593 0.408520134 0.076078092 189.6536829 482456.4387 0.023844871 0.023871741 2.93E-07 6.532703087 0.139956155 ERS(ph)PDSFSMR ddPTM_A459_MK2206_30min_R1 1 ERSPDSFSMR 10 1 Q92834-2;Q92834;H7C4H4;A0A2R8YDN2;A0A2R8Y838;A0A2R8Y414;Q92834-5;Q92834-3;Q92834-6 Q92834-2 RPGR X-linked retinitis pigmentosa GTPase regulator 1 ERS(1)PDSFSMR 122.34 0.021334 7245800 2303.7 2245.1 2207 2014.4 2171.7 1929.9 1974 2148.8 1910 1653.9 TRUE FALSE 2107.758218 2098.943582 2057.194989 2169.549437 2085.19659 2039.16927 1842.318062 2130.013268 2108.551335 1858.797618 1.133936367 1.12919425 1.106734251 1.167178942 1.121798613 1.097036735 0.991134292 1.145909187 1.13436305 1 10.86015399 -6.819446007 3.872689408 1.07603203 1.132687673 0.272673105 0.048328014 0.351327628 10.66242061 0.017768748 0.015989716 1.52E-07 6.819446007 0.056655643 ERS(ph)PDSFSMR ddPTM_A459_MK2206_30min_R2 2 ERSPDSFSMR 10 1 Q92834-2;Q92834;H7C4H4;A0A2R8YDN2;A0A2R8Y838;A0A2R8Y414;Q92834-5;Q92834-3;Q92834-6 Q92834-2 RPGR X-linked retinitis pigmentosa GTPase regulator 1 ERS(1)PDSFSMR;ERS(0.995)PDS(0.005)FSMR 67.118 0.046069 8117000 18539.7 46719 25619 78812 63040 103193 37799 37691 59851 28369.5 TRUE FALSE 19959.11369 44399.0024 26473.12467 72372.80749 60564.73285 107120.0819 32835.9459 42617.34311 65056.73179 27443.80554 0.727272085 1.617815078 0.964630238 2.637127252 2.206863504 3.903251748 1.196479324 1.552894807 2.370543389 1 14.74419293 -5.752439504 24.98899868 2.18587374 1.154696502 0.251504158 0.800419735 275.0148315 763596.6262 0.220535796 0.374944548 1.77E-06 5.752439504 -1.031177239 ERS(ph)PSPSFR ddPTM_A459_MK2206_30min_R2 1 ERSPSPSFR 9 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 ERS(0.97)PS(0.025)PS(0.005)FR 66.663 0.046515 17224000 3331.2 6879.6 2717.6 2757.8 2602.1 6895.7 5491.6 3036 3114.1 2019 TRUE FALSE 3586.239233 6537.969068 2808.203428 2532.478918 2499.928479 7158.120696 4770.546323 3432.815624 3384.958789 1953.120195 1.836159004 3.347448397 1.437803692 1.296632396 1.27996653 3.664966812 2.442525726 1.757605923 1.733103163 1 10.93156502 -5.277109795 24.93613088 1.90283967 2.59180388 0.122550523 0.798441669 1653.283499 2630848.101 0.219145826 0.458660211 5.28E-06 5.277109795 0.68896421 ERSDS(ph)GGSSSEPFDR ddPTM_A459_MK2206_30min_R1 2 ERSDSGGSSSEPFDR 15 1 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 ERSDS(0.992)GGS(0.006)S(0.002)SEPFDR;ERSDS(0.914)GGS(0.007)S(0.078)S(0.002)EPFDR 262.73 6.39E-36 38661000 5097.8 4862.3 4993.8 4711.4 5538.9 5133 5823.3 5628.3 5220.4 4176.6 TRUE FALSE 4664.20534 4545.763386 4654.83477 5074.272844 5318.273884 5423.626024 5434.838282 5579.092366 5763.079261 4694.02874 0.993646524 0.968414051 0.991650249 1.081005917 1.132987073 1.155430937 1.157819558 1.18855096 1.227746906 1 12.19661096 -5.976789494 1.718210618 1.157705632 0.976295107 0.614035563 0.05602895 0.21575333 1.286963438 0.017766396 0.030163474 1.05E-06 5.976789494 -0.181410525 ERSDS(ph)GGSSSEPFDR ddPTM_A459_MK2206_30min_R2 1 ERSDSGGSSSEPFDR 15 1 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 ERS(0.05)DS(0.941)GGS(0.009)SSEPFDR 89.344 0.0091802 19467000 8227.8 14431 11092 12720 11412 15390 14189 11987 12714 10702 TRUE FALSE 8857.726694 13714.37752 11461.80174 11680.73531 10963.90754 15975.67723 12325.96726 13553.74206 13819.84074 10352.79462 0.855587986 1.324702946 1.107121523 1.128268815 1.059028788 1.543127032 1.190593237 1.3091868 1.334889878 1 13.33773264 ERSFHPEQDAGK ddPTM_A459_MK2206_30min_R1 1 ERSFHPEQDAGK 12 1 U3KQC1;K7EIR0;A0A0A0MQU0;Q9BV38;K7EML4 U3KQC1 WDR18 WD repeat-containing protein 18 0 103.21 0.03072 12068000 6809.9 6776.7 6609 6286.8 6420.3 6147 6735.1 6144.1 6622.1 7399.5 FALSE TRUE 6230.682245 6335.535598 6160.399494 6771.010425 6164.565856 6495.037828 6285.813768 6090.382781 7310.490992 8316.205923 0.749221737 0.761830053 0.740770437 0.814194657 0.74127143 0.78100974 0.755851145 0.732351127 0.879065653 1 13.02170977 -8.518299992 3.234360615 0.999377907 0.761170697 0.916750528 0.023106559 0.054208713 1.435560005 0.021669188 0.00575075 3.03E-09 8.518299992 -0.23820721 ERSMS(ph)ENAVR ddPTM_A459_MK2206_30min_R1 1 ERSMSENAVR 10 1 A0A0A0MS29;Q9GZY8-2;C9JHF5;H7C433;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8-5 MFF Mitochondrial fission factor 1 ERS(0.208)MS(0.792)ENAVR 128.36 0.01486 2817700 1336.7 1304.3 1033.9 1438.6 2657.2 1968.7 1820.7 2086 925.9 994.52 TRUE FALSE 1223.006646 1219.389833 963.7217486 1549.401221 2551.358097 2080.166093 1699.244425 2067.762322 1022.150618 1117.728646 1.094189229 1.09095337 0.862214413 1.386205164 2.282627458 1.861065385 1.520265613 1.849968084 0.91448906 1 10.12635427 -5.980579901 8.092269455 1.644603953 1.037758814 0.280498887 0.3869284 0.211570246 67.80591837 0.109081048 0.159677019 1.05E-06 5.980579901 -0.606845139 ERTDVIQGDDVADAT(ph)SEVEVSSTSETTPK ddPTM_A459_MK2206_30min_R1 1 ERTDVIQGDDVADATSEVEVSSTSETTPK 29 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 ERTDVIQGDDVADAT(0.474)S(0.474)EVEVS(0.016)S(0.021)T(0.007)S(0.003)ET(0.003)T(0.001)PK 72.566 0.018575 0 342.37 318.77 272.61 173.27 375.3 342.54 241.16 568.82 202.65 207.74 TRUE FALSE 313.2496336 298.0180151 254.1059927 186.6152854 360.3510063 361.9343188 225.0726564 563.8468667 223.7161927 233.4763996 1.341675794 1.276437428 1.088358366 0.799289717 1.543415124 1.550196591 0.964006027 2.415005833 0.958196174 1 7.867132915 -6.297502058 24.81024316 1.461083423 1.134434042 0.084439377 0.426007748 1159.872282 797960.5752 0.127113759 0.144137949 5.04E-07 6.297502058 -0.326649381 ERTDVIQGDDVADATSEVEVSSTSET(ph)TPK ddPTM_A459_MK2206_30min_R1 3 ERTDVIQGDDVADATSEVEVSSTSETTPK 29 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 ERTDVIQGDDVADATSEVEVS(0.003)S(0.002)T(0.002)S(0.008)ET(0.919)T(0.066)PK;ERTDVIQGDDVADATSEVEVS(0.004)S(0.062)T(0.062)S(0.062)ET(0.751)T(0.058)PK;ERTDVIQGDDVADATSEVEVS(0.005)S(0.005)T(0.003)S(0.014)ET(0.927)T(0.047)PK 150.94 1.28E-15 20957600 3695.03 4234.01 3908.51 2867.3 2640.56 1966.34 2339.5 2445.39 2879.5 2641.69 TRUE FALSE 3380.748295 3958.375179 3643.211231 3088.139943 2535.380904 2077.672472 2183.436224 2424.010213 3178.834329 2968.962501 1.138696866 1.333251996 1.227099106 1.040141107 0.853961915 0.699797478 0.735420613 0.816450262 1.070688609 1 11.53574316 -5.996851833 2.445155972 0.838735286 1.246260828 0.676968055 0.114083603 0.161824976 1.945447291 0.036700794 0.056121028 1.01E-06 5.996851833 0.407525542 ERVDDSTGTVIS(ph)DVEEDAGELSR ddPTM_A459_MK2206_30min_R1 4 ERVDDSTGTVISDVEEDAGELSR 23 1 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 ERVDDSTGT(0.007)VIS(0.993)DVEEDAGELSR;ERVDDSTGTVIS(1)DVEEDAGELSR;ERVDDSTGTVIS(1)DVEEDAGELSR;ERVDDSTGTVIS(0.999)DVEEDAGELSR 187.89 2.17E-22 25296300 3881.69 4792.29 4339.13 4103.42 4574.174 3398.85 3640.55 3924.86 3621.52 3045.98 TRUE FALSE 3551.531882 4480.31105 4044.601945 4419.466119 4391.974964 3591.28995 3397.695552 3890.545363 3997.989964 3423.338998 1.037446739 1.308754713 1.181478652 1.290981151 1.282950641 1.049060567 0.99250923 1.136476804 1.167862711 1 11.74118845 -6.768784398 24.99295186 1.072919601 1.227002792 0.423578591 0.087929972 167.2401971 569065.9379 0.030552478 0.027476247 1.70E-07 6.768784398 0.154083191 ERVDDSTGTVIS(ph)DVEEDAGELSR ddPTM_A459_MK2206_30min_R2 2 ERVDDSTGTVISDVEEDAGELSR 23 1 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 ERVDDS(0.002)T(0.001)GTVIS(0.997)DVEEDAGELSR;ERVDDSTGTVIS(1)DVEEDAGELSR 94.588 4.57E-05 6815100 34506.3 35639.7 32103.3 37105 33890.2 31316.7 36896.2 27360.6 29893.6 30699.2 TRUE FALSE 37148.12886 33869.88432 33173.608 34073.40281 32559.50046 32508.47896 32051.68462 30936.72436 32493.69129 29697.48762 1.250884564 1.140496622 1.117050992 1.147349676 1.096372221 1.09465418 1.079272598 1.041728673 1.094156237 1 14.85805326 -1.522878745 0.198268326 1.015826936 1.955759691 0.813684137 0.02745466 22.50804091 0.270450794 0.050671286 6.554636973 0.03 1.522878745 0.939932755 ES(ph)AWSPPPIEIR ddPTM_A459_MK2206_30min_R1 1 ESAWSPPPIEIR 12 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 ES(0.796)AWS(0.204)PPPIEIR 99.161 0.01462 3160300 1709.2 1864.3 1687.1 1244.1 1552.1 1380.6 1582.2 1704.6 1422.6 1059.9 TRUE FALSE 1563.823565 1742.933731 1572.584353 1339.920798 1490.27657 1458.768379 1476.654325 1689.696862 1570.484361 1191.208414 1.312804331 1.463164389 1.320158869 1.124841616 1.251062831 1.224612219 1.239627178 1.418472907 1.31839596 1 10.21821013 -10.90932061 3.139429335 0.996495006 1.29592238 0.486172781 0.091597646 26731329.81 35111343.9 851466.8832 0.025860349 1.23E-11 10.90932061 0.299427375 ES(ph)EELLK ddPTM_A459_MK2206_30min_R1 2 ESEELLK 7 0 O43303-2;O43303 O43303-2 CCP110 Centriolar coiled-coil protein of 110 kDa 1 ES(1)EELLK;ES(1)EELLK 98.033 0.022118 24515000 5352.1 6218.1 4893.4 5788.9 5310.8 5745.9 5614.8 5355.5 7407.3 5391.7 TRUE FALSE 4896.87579 5813.30056 4561.249642 6234.762081 5099.25959 6071.227892 5240.246937 5308.677428 8177.315342 6059.664501 0.808110051 0.959343633 0.752723132 1.02889559 0.841508567 1.001908256 0.864775094 0.876067879 1.349466681 1 12.5650222 -8.239491573 24.87240761 1.174733346 0.894971678 0.503201332 0.112465718 476.7763433 540309.9981 0.068932009 0.02600244 5.76E-09 8.239491573 -0.279761667 ES(ph)EELLK ddPTM_A459_MK2206_30min_R2 2 ESEELLK 7 0 O43303-2;O43303 O43303-2 CCP110 Centriolar coiled-coil protein of 110 kDa 1 ES(1)EELLK;ES(1)EELLK 116.05 0.012601 35779000 75415 113688 106038 84771 108803 76954 113835 104074 92276 95402 TRUE FALSE 81188.83038 108042.4192 109573.254 77844.93813 104530.8475 79882.53839 98888.32776 117676.8291 100301.9997 92289.04055 0.87972342 1.170696093 1.187283488 0.843490599 1.132646378 0.865569063 1.071506727 1.275089961 1.086824601 1 16.49387172 -7.529051338 24.9942031 1.143234051 1.021225807 0.107586156 0.133886824 320.0308406 1295850.409 0.061222539 0.035467727 2.96E-08 7.529051338 -0.122008244 ES(ph)EQESEEEILAQK ddPTM_A459_MK2206_30min_R2 2 ESEQESEEEILAQK 14 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 ES(0.843)EQES(0.157)EEEILAQK;ES(0.532)EQES(0.468)EEEILAQK 212.43 2.79E-06 15208000 66180 57620 50868 47970 48133 37596 62062 51125 33760 62041 TRUE FALSE 71246.79168 54758.67459 52563.91373 44050.69755 46243.05657 39026.74212 53913.18485 57807.21304 36696.38378 60016.60725 1.187117949 0.912392038 0.875822812 0.733975137 0.770504344 0.650265717 0.898304441 0.963186953 0.611437158 1 15.87307414 -4.552375288 1.434271564 0.801287167 1.535564266 0.472425562 0.119654765 1.800099748 2.246116793 0.03351906 2.220073716 2.80E-05 4.552375288 0.734277098 ES(ph)GRFQDVGPQAPVGS(ph)VY(ph)QK ddPTM_A459_MK2206_30min_R2 1 ESGRFQDVGPQAPVGSVYQK 20 1 H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3 H0Y5J4;B4DDD6 DBNL Drebrin-like protein 3 ES(1)GRFQDVGPQAPVGS(1)VY(1)QK 56.039 0.045052 0 4775.6 7598 7986.5 8768.7 9183.2 7138.8 7607.7 7307.1 4735.1 6436.6 TRUE FALSE 5141.223608 7220.694369 8252.765924 8052.26916 8822.621426 7410.472036 6608.799852 8262.163059 5146.950439 6226.574269 0.825690562 1.159657631 1.325410341 1.293210169 1.416930248 1.190136296 1.061386176 1.326919539 0.826610302 1 12.60422293 -8.265232977 24.99913782 0.91330513 1.208158459 0.331290123 0.162543718 403.5307705 2659137.064 0.141824119 0.042024725 5.43E-09 8.265232977 0.294853329 ES(ph)HTPVSIQEEIVGDFK ddPTM_A459_MK2206_30min_R1 2 ESHTPVSIQEEIVGDFK 17 0 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;A0A0A0MR81;F5H176 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 ES(0.586)HT(0.414)PVSIQEEIVGDFK;ES(0.602)HT(0.398)PVSIQEEIVGDFK 151.64 0.00013564 5635500 5517.5 5593.2 5068.6 3984.2 4742.7 4609.1 5534.7 4357.9 5334.1 4204 TRUE FALSE 5048.207651 5229.081663 4724.557554 4291.063774 4553.788216 4870.063259 5165.490262 4319.79934 5888.598783 4724.823259 1.068443702 1.106725348 0.999943764 0.908195617 0.963800753 1.030739774 1.093266346 0.914277446 1.246310912 1 12.20604465 -8.253336911 24.99988939 1.123155462 1.011961665 0.21877023 0.084994997 832.4040721 2568375.435 0.059276809 0.021562372 5.58E-09 8.253336911 -0.111193796 ES(ph)LCDSPHQNLSR ddPTM_A459_MK2206_30min_R1 1 ESLCDSPHQNLSR 13 0 O15042-2;O15042;C9J5L1;E7EW00;E7ET15;U3KPT1;C9JDJ7;H0Y8D9 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 ES(0.54)LCDS(0.46)PHQNLSR 162.64 0.00036328 11535000 2758 2881 3320.5 2285.6 2695.1 2412.3 2812.5 2803.6 2565.6 2793.8 TRUE FALSE 2523.417617 2693.446376 3095.113711 2461.637308 2587.74846 2548.882341 2624.883257 2779.088421 2832.303301 3139.917036 0.803657418 0.857808135 0.985731048 0.78398164 0.824145489 0.811767417 0.835972169 0.885083392 0.902031254 1 11.61651072 -8.606540078 1.326720156 0.998863844 0.845936519 0.446849497 0.052663073 0.539977299 2.036495602 0.052453366 0.015841836 2.47E-09 8.606540078 -0.152927325 ES(ph)LCDSPHQNLSR ddPTM_A459_MK2206_30min_R2 1 ESLCDSPHQNLSR 13 0 O15042-2;O15042;C9J5L1;E7EW00;E7ET15;U3KPT1;C9JDJ7;H0Y8D9 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 ES(0.873)LCDS(0.126)PHQNLS(0.001)R 165.78 0.00034913 8722100 17604 17266 16980 21362 18861 18064 19159 15739 18038 23575 TRUE FALSE 18951.77578 16408.59555 17546.10473 19616.65627 18120.42237 18751.43818 16643.40029 17796.14134 19606.91263 22805.74968 0.831008673 0.719493802 0.769371977 0.860162746 0.794554997 0.822224151 0.729789659 0.780335731 0.859735501 1 14.47710998 -8.617907158 2.755281599 0.999750084 0.787520049 0.712247931 0.04107433 0.216371973 3.745225661 0.040572427 0.010877564 2.41E-09 8.617907158 -0.212230034 ES(ph)MEASPEAMVK ddPTM_A459_MK2206_30min_R1 1 ESMEASPEAMVK 12 0 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 ES(0.636)MEAS(0.364)PEAMVK 175.48 0.00010344 20219000 4147.5 3848.6 3240.6 3427.7 3864.2 3717.7 3572.2 3404.4 3552.7 2665.6 TRUE FALSE 3794.733346 3598.05544 3020.637101 3691.702048 3710.280731 3928.192961 3333.905056 3374.63569 3922.015878 2995.834652 1.266669822 1.201019368 1.008278978 1.232278305 1.23847981 1.311218214 1.112846817 1.126442572 1.309156323 1 11.54874228 -10.72861732 4.678963317 0.999962417 1.195580432 0.307153434 0.090138051 3.61E-05 6.12E-06 0.089079564 0.02160082 1.87E-11 10.72861732 0.195618015 ES(ph)NMERRVITISKS(ph)EYSVHS(ph)S(ph)LASK ddPTM_A459_MK2206_30min_R2 1 ESNMERRVITISKSEYSVHSSLASK 25 3 O43683-2;O43683-3;O43683;A0A590UK50 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 4 ES(0.997)NMERRVIT(0.145)IS(0.204)KS(0.607)EY(0.186)S(0.2)VHS(0.553)S(0.553)LAS(0.553)K 45.885 0.017572 9998700 7255.2 41583 23947 88877 60430 112100 27271 38979 81028 15890 TRUE FALSE 7810.66369 39518.04869 24745.38103 81615.4648 58057.21456 116366.0441 23690.28494 44073.68913 88075.66897 15371.5106 0.508125967 2.570863054 1.60982103 5.309527926 3.776936182 7.570241278 1.541181316 2.867232133 5.729799189 1 13.90797133 -5.743021569 24.72031001 4.089180953 1.663727622 0.250265568 1.899628177 299.9647506 402607.7294 0.505213677 0.872897187 1.81E-06 5.743021569 -2.425453331 ES(ph)PAHPEADGAPK ddPTM_A459_MK2206_30min_R2 1 ESPAHPEADGAPK 13 0 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 ES(1)PAHPEADGAPK 87.831 0.024608 1929700 16073 9758.2 13110 12031 11661 8632.7 10560 10005 7736.1 13641 TRUE FALSE 17303.56124 9273.621978 13547.08086 11048.02881 11203.13055 8961.223448 9173.459315 11312.68785 8408.971994 13195.89529 1.311283612 0.702765654 1.026613243 0.837232228 0.848986015 0.679091737 0.695175213 0.857288392 0.637241491 1 13.68780161 -4.754224307 24.99944214 0.806174017 1.311284492 0.587266396 0.126203933 179.1062521 620530.7936 0.030875183 0.30792664 1.76E-05 4.754224307 0.505110475 ES(ph)PEGSYTDDANQEVR ddPTM_A459_MK2206_30min_R1 1 ESPEGSYTDDANQEVR 16 0 A0A075B6Q2;S4R347;Q5T0N5-3;Q5T0N5-4;Q5T0N5-2;Q5T0N5-5;Q5T0N5 A0A075B6Q2 FNBP1L Formin-binding protein 1-like 1 ES(0.996)PEGS(0.004)YTDDANQEVR 306.37 5.22E-89 8368800 897.84 1112.9 1003.6 643.31 898.18 787 1255.6 830.06 1346.4 1834.8 TRUE FALSE 821.4739933 1040.450008 935.4784282 692.8578477 862.4035887 831.5592599 1171.841215 822.8028729 1486.363098 2062.108876 0.398365965 0.504556292 0.453651327 0.335994794 0.418214382 0.403256719 0.568273203 0.399010393 0.720797585 1 11.00990479 -8.515820049 2.502957001 0.999739562 0.436159457 0.893123362 0.062455459 0.081247925 1.19668076 0.060509541 0.016445627 3.05E-09 8.515820049 -0.563580105 down ES(ph)PEGSYTDDANQEVR ddPTM_A459_MK2206_30min_R2 2 ESPEGSYTDDANQEVR 16 0 A0A075B6Q2;S4R347;Q5T0N5-3;Q5T0N5-4;Q5T0N5-2;Q5T0N5-5;Q5T0N5 A0A075B6Q2 FNBP1L Formin-binding protein 1-like 1 ES(1)PEGSYTDDANQEVR;ES(1)PEGSYTDDANQEVR 323.02 1.15E-117 52010000 45964 40584 40528 41244 35775 29374 45390 33631 23316 44577 TRUE FALSE 49483.03918 38568.65757 41879.18329 37874.23327 34370.29375 30491.84815 39430.23848 38026.68717 25343.98353 43122.45614 1.147500481 0.894398442 0.971168784 0.878294899 0.797039335 0.707099059 0.914378308 0.881830271 0.587721243 1 15.39615173 -1.522878745 0.60006476 0.811398003 20.82207612 0.408979786 0.113463321 167.5568047 1.297977453 0.04996597 4396.238558 0.03 1.522878745 20.01067812 ES(ph)PGAAATSSSGPQAQQHR ddPTM_A459_MK2206_30min_R1 3 ESPGAAATSSSGPQAQQHR 19 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 ES(1)PGAAATSSSGPQAQQHR;ES(1)PGAAATSSSGPQAQQHR;ES(1)PGAAATSSSGPQAQQHR 308.24 1.17E-116 47758000 4835.31 3983.9 4482.83 2747.97 4627.85 4599.05 6028.3 4269.25 5461.53 6167.17 TRUE FALSE 4424.041493 3724.547386 4178.547989 2959.619126 4443.512935 4859.444237 5626.163106 4231.924397 6029.275588 6931.205579 0.638278788 0.537359243 0.602860201 0.426999184 0.641088031 0.701096538 0.811714938 0.610561085 0.869874009 1 12.75889059 -8.188150626 0.430635598 1.012238424 0.540248905 0.709290878 0.086009785 0.590248834 0.303372357 0.108728463 0.069045802 6.48E-09 8.188150626 -0.471989519 ES(ph)PGAAATSSSGPQAQQHR ddPTM_A459_MK2206_30min_R2 4 ESPGAAATSSSGPQAQQHR 19 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 ES(1)PGAAATSSSGPQAQQHR;ES(1)PGAAATSSSGPQAQQHR;ES(1)PGAAATSSSGPQAQQHR;ES(1)PGAAATSSSGPQAQQHR 188.34 1.73E-15 83719000 35320.5 35182 30593.9 37601 37033.2 31047.1 45439.6 29996.9 27237.7 37405.7 TRUE FALSE 38024.66464 33434.91304 31613.88536 34528.87802 35579.09049 32228.61915 39473.32594 33917.59782 29606.78591 36185.15507 1.050836028 0.923995295 0.873670026 0.95422772 0.983251016 0.890658589 1.090870714 0.937334599 0.818202543 1 15.14311033 -10.73438764 3.940497607 1.000035968 0.947739634 0.041263409 0.07656043 79609133.05 2.07498906 29499.48547 0.01895249 1.84E-11 10.73438764 -0.052296334 ES(ph)PGSSEFFQEAVSHGK ddPTM_A459_MK2206_30min_R1 1 ESPGSSEFFQEAVSHGK 17 0 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12 Q8N108-17 MIER1 Mesoderm induction early response protein 1 1 ES(0.994)PGS(0.003)S(0.003)EFFQEAVSHGK 183.18 4.40E-08 6339900 2538.2 2083 2354 1826.4 1762.7 2077.9 2748.7 1819.6 3349 4221.1 TRUE FALSE 2322.312761 1947.396321 2194.217039 1967.069644 1692.487926 2195.548902 2565.339238 1803.691429 3697.140535 4744.041736 0.489521992 0.410493084 0.462520602 0.414640038 0.356760758 0.462801346 0.54074972 0.380201425 0.779322936 1 12.21190099 -8.452736598 3.168616257 0.997459759 0.439930002 0.924143968 0.053258334 0.054239746 1.112553539 0.051564982 0.013750934 3.53E-09 8.452736598 -0.557529757 down ES(ph)PGSSEFFQEAVSHGK ddPTM_A459_MK2206_30min_R2 2 ESPGSSEFFQEAVSHGK 17 0 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12 Q8N108-17 MIER1 Mesoderm induction early response protein 1 1 ES(0.91)PGS(0.045)S(0.045)EFFQEAVSHGK;ES(0.842)PGS(0.061)S(0.097)EFFQEAVSHGK 88.951 0.0064811 7318600 58534 46019 50793 57192 49457 43522 57063 48428 37088 60666 TRUE FALSE 63015.40805 43733.76338 52486.41327 52519.23065 47515.06968 45178.26021 49570.55956 54757.70588 40313.8472 58686.47339 1.073763755 0.745210282 0.894352825 0.894912023 0.809642613 0.769824077 0.844667548 0.933054974 0.68693593 1 15.8407404 -4.74637872 24.84057338 0.840070471 1.073764432 0.380789804 0.088604712 775.955766 1279759.46 0.020579918 0.468153401 1.79E-05 4.74637872 0.233693961 ES(ph)PSAAGPEDK ddPTM_A459_MK2206_30min_R2 2 ESPSAAGPEDK 11 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3;H0YF21 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 ES(0.988)PS(0.012)AAGPEDK;ES(0.998)PS(0.002)AAGPEDK 132.5 0.0035084 0 49527 33393 34546 33574 31259 27558 42261 35252 24604 43724 TRUE FALSE 53318.8252 31734.75218 35697.7464 30830.8968 30031.6146 28606.739 36712.07994 39859.55744 26744.01145 42297.28946 1.260573098 0.750278625 0.843972435 0.728909516 0.710012745 0.676325584 0.867953488 0.942366708 0.63228665 1 15.36827759 -4.758635167 24.99703619 0.788308034 1.260573732 0.607504336 0.112239402 50.52016846 450257.3585 0.02705956 0.182476455 1.74E-05 4.758635167 0.472265698 ES(ph)PSLASR ddPTM_A459_MK2206_30min_R1 3 ESPSLASR 8 0 H3BUF6;Q8WWM7-7;H3BSK9;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 ES(0.982)PS(0.008)LAS(0.01)R;ES(1)PSLASR;ES(0.999)PS(0.001)LASR 148.04 0.0016233 92441000 17657.7 17258.3 17963 12877.6 16566.8 17142.4 21115.5 14889.3 21333.8 27218.2 TRUE FALSE 16155.81989 16134.78153 16743.72161 13869.43498 15906.90928 18112.98787 19706.92352 14759.12442 23551.52485 30590.1961 0.52813718 0.527449431 0.547355811 0.453394772 0.520000239 0.592117416 0.644223511 0.482478908 0.769904344 1 14.90078174 -8.516223387 3.072126064 0.99916076 0.539243926 0.892000022 0.051477641 0.070988679 1.654666387 0.052340188 0.013945946 3.05E-09 8.516223387 -0.459916834 ES(ph)PSLASR ddPTM_A459_MK2206_30min_R2 2 ESPSLASR 8 0 H3BUF6;Q8WWM7-7;H3BSK9;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 ES(0.999)PS(0.001)LASR;ES(1)PSLASR 162.64 0.00036287 123060000 425750 355650 399430 425750 336790 357860 416890 364610 307810 443730 TRUE FALSE 458345.7473 337988.9382 412746.7968 390964.8631 323565.9324 371478.6131 362151.8422 412265.7789 334582.7574 429251.1264 1.067779952 0.787392082 0.961550876 0.910806842 0.753791691 0.865410922 0.843682916 0.960430278 0.779456912 1 18.71146239 -4.745565244 24.99212939 0.871351289 1.067780501 0.345134328 0.080182971 1010.530499 1590885.849 0.018907134 0.472165159 1.80E-05 4.745565244 0.196429212 ES(ph)PSPAPKPR ddPTM_A459_MK2206_30min_R2 2 ESPSPAPKPR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 ES(0.98)PS(0.02)PAPKPR;ES(0.998)PS(0.002)PAPKPR 81.676 0.024477 12755500 70572 70790 82322 83175 80465 66513 80678 64888 70695 72130 TRUE FALSE 75975.04658 67274.67154 85066.57439 76379.33644 77305.5398 69044.19882 70084.88169 73369.08439 76843.92331 69776.40401 1.088835799 0.96414644 1.21913096 1.094629876 1.107903752 0.989506407 1.004420946 1.051488471 1.101288099 1 16.09045163 -6.744892233 24.97062064 1.031001318 1.094547108 0.205647136 0.064409536 428.7834943 647058.3465 0.021845856 0.021785231 1.80E-07 6.744892233 0.06354579 ES(ph)RSPQQSAALPR ddPTM_A459_MK2206_30min_R2 1 ESRSPQQSAALPR 13 1 E5RJN3;A0A0A6YYG7;Q6IBW4-2;Q6IBW4;Q6IBW4-4 E5RJN3 NCAPH2 Condensin-2 complex subunit H2 1 ES(0.76)RS(0.24)PQQSAALPR 77.74 0.023375 7111300 7889.4 6289.3 8413.7 6917 8947.2 9852.6 8883.8 4002.9 8088.5 7941.7 TRUE FALSE 8493.41853 5976.982507 8694.208559 6351.858974 8595.887972 10227.5476 7717.346389 4526.092774 8792.023109 7682.562979 1.105544927 0.777993298 1.13168074 0.826789053 1.118882851 1.331267654 1.004527579 0.589138389 1.144412761 1 12.90737197 -7.542709456 24.99314914 0.879431961 1.044484102 0.08235226 0.196606708 524.5191596 661056.7753 0.091540311 0.052858001 2.87E-08 7.542709456 0.165052141 ES(ph)SLPNGR ddPTM_A459_MK2206_30min_R2 1 ESSLPNGR 8 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 ES(0.867)S(0.133)LPNGR 80.755 0.045381 2671700 19299 17008 14969 19357 19579 25850 18975 20527 22913 21911 TRUE FALSE 20776.54628 16163.40745 15468.05899 17775.47118 18810.23008 26833.73986 16483.55971 23209.94938 24905.93132 21196.04586 0.980208592 0.762567111 0.729761536 0.838622038 0.887440526 1.265978571 0.777671449 1.09501317 1.175027242 1 14.37150753 -6.539095362 24.97213476 1.053732 0.821991788 0.415846211 0.133382408 236.9495674 364878.5816 0.043414279 0.043425594 2.89E-07 6.539095362 -0.231740212 ES(ph)SPEKEAEEGCPEKESEEGCPK ddPTM_A459_MK2206_30min_R1 1 ESSPEKEAEEGCPEKESEEGCPK 23 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ES(0.529)S(0.471)PEKEAEEGCPEKESEEGCPK 58.92 0.0052607 73954000 1627.2 2240 2158.3 2291.3 1181.6 823.29 1215.3 1668.7 1803 1689.3 TRUE FALSE 1488.798095 2094.175593 2011.800609 2467.776323 1134.53437 869.9039683 1134.229554 1654.110732 1990.428302 1898.583238 0.784162667 1.103020163 1.059632556 1.299798857 0.597568938 0.458185847 0.59740839 0.871234244 1.04837558 1 10.89070754 -6.272395986 24.79553476 0.732257373 1.064463968 0.324085175 0.209244633 754.5415615 1707574.592 0.068835949 0.078803982 5.34E-07 6.272395986 0.332206596 ES(ph)SPFLSPLEASR ddPTM_A459_MK2206_30min_R1 1 ESSPFLSPLEASR 13 0 Q9UP95-3;Q9UP95-5;Q9UP95-2;Q9UP95-6;Q9UP95;Q9UP95-4 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 ES(0.769)S(0.231)PFLSPLEASR 139.19 0.00094787 5272000 2426.3 2022.3 2240.7 1912.4 2492.7 2435.6 2724.6 2548.8 2122.5 1914.3 TRUE FALSE 2219.930444 1890.647902 2088.607527 2059.693379 2393.410481 2573.501567 2542.846905 2526.51611 2343.14147 2151.457936 1.031826096 0.878775211 0.970787061 0.957347734 1.112459807 1.196166341 1.181918021 1.174327449 1.089094716 1 11.07109892 -6.301512601 3.968998004 1.143449558 0.953125276 0.613097009 0.063980515 0.131946119 4.539699714 0.019426452 0.023036768 4.99E-07 6.301512601 -0.190324282 ES(ph)SPIPS(ph)PTSDRK ddPTM_A459_MK2206_30min_R1 1 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 2 ES(0.501)S(0.501)PIPS(0.811)PT(0.112)S(0.076)DRK 111.72 0.017334 2023200 1672.2 1269.7 1407.7 1208.1 1583.2 1209.1 1517.6 1571 1787.1 1952.7 TRUE FALSE 1529.970609 1187.042299 1312.149246 1301.148071 1520.137792 1277.558197 1416.363673 1557.264913 1972.87544 2194.615218 0.697147544 0.540888576 0.5978949 0.592882096 0.692667115 0.582133117 0.645381323 0.709584487 0.898961888 1 11.0997523 -8.266350777 1.627575396 1.001382353 0.61488769 0.894349538 0.045232009 0.101983124 0.512720015 0.041269624 0.012424114 5.42E-09 8.266350777 -0.386494662 ES(ph)SPIPSPTSDRK ddPTM_A459_MK2206_30min_R2 2 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 ES(0.773)S(0.227)PIPSPTSDRK;ES(0.622)S(0.376)PIPS(0.001)PTSDRK 90.476 0.010819 17151000 62351 76828 75704 73343 67381 66987 87580 56266 66894 72974 TRUE FALSE 67124.6405 73012.83324 78227.93358 67350.64229 64735.28338 69536.23723 76080.6408 63620.15939 72712.3192 70592.86436 0.950870051 1.034280644 1.108156388 0.954071533 0.917023044 0.985032097 1.077738402 0.90122649 1.030023641 1 16.10723474 ES(ph)SPLYS(ph)PTFSDSTSAVK ddPTM_A459_MK2206_30min_R1 1 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 ES(0.502)S(0.467)PLY(0.333)S(0.68)PT(0.003)FS(0.015)DSTSAVK 133.92 0.0033741 21266000 10795 10993 11632 10222 10643 8187.9 9541.8 9604.3 8981.3 8018.3 TRUE FALSE 9876.828563 10277.3537 10842.45225 11009.30021 10219.06677 8651.491822 8905.283932 9520.330618 9914.938275 9011.667539 1.096004543 1.140449718 1.203157152 1.221671812 1.133981777 0.96003229 0.988194903 1.056444945 1.100233473 1 13.13757837 -6.616942043 6.07205076 1.023112139 1.167577338 0.678008575 0.047895735 0.134952263 7.203819992 0.017350813 0.017331577 2.42E-07 6.616942043 0.144465199 ES(ph)SPLYSPT(ph)FSDSTSAVK ddPTM_A459_MK2206_30min_R1 1 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 ES(0.5)S(0.5)PLYS(0.176)PT(0.538)FS(0.176)DS(0.058)T(0.042)S(0.01)AVK 118.66 0.013346 0 1738.1 1887.4 2088.7 1750.3 1768.9 1506.1 1273.1 1790.2 1350.3 1153.8 TRUE FALSE 1590.265468 1764.529917 1946.924863 1885.108409 1698.440967 1591.37408 1188.173822 1774.54847 1490.668517 1296.741455 1.226355078 1.360741504 1.501397874 1.453727266 1.309776102 1.22721 0.916276577 1.368467449 1.14954952 1 10.34067515 -6.764420769 2.834658729 1.133817464 1.389314831 0.470536264 0.130083071 0.251846126 4.156479074 0.048944212 0.045369883 1.72E-07 6.764420769 0.255497368 ES(ph)SPLYSPTFSDSTSAVK ddPTM_A459_MK2206_30min_R1 1 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.913)S(0.087)PLYSPTFSDSTSAVK 183.21 4.67E-10 222840000 7769.4 8239.1 8618.2 7041.9 8144.6 7373.5 7407.3 8354.1 6811 6309.5 TRUE FALSE 7108.571731 7702.733092 8033.220596 7584.268358 7820.183336 7790.981198 6913.172532 8281.060984 7519.027823 7091.168494 1.002454213 1.086243134 1.132848642 1.069537181 1.102806024 1.098687925 0.974898924 1.167799213 1.060336929 1 12.79180766 -8.542522624 23.4580095 0.999999997 1.08121824 0.165525924 0.05348126 3472.402813 4146611.981 0.049799056 0.012858061 2.87E-09 8.542522624 0.081218243 ES(ph)SPLYSPTFSDSTSAVK ddPTM_A459_MK2206_30min_R2 2 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.849)S(0.15)PLY(0.001)SPTFSDSTSAVK;ES(0.892)S(0.108)PLYSPTFSDSTSAVK 224.12 4.81E-15 120999000 496150 637470 540680 591760 614280 504600 638290 584930 568270 624080 TRUE FALSE 534135.6255 605814.1668 558706.0013 543411.3151 590160.2807 523802.9066 554481.7563 661382.3594 617697.0974 603716.3207 0.884746042 1.003474887 0.925444587 0.90011036 0.977545679 0.867630853 0.918447518 1.095518436 1.023157858 1 19.20351128 -7.74832682 24.99946577 1.044503609 0.927169449 0.582635822 0.044220868 145.4675924 277339.3609 0.02038486 0.011678917 1.79E-08 7.74832682 -0.11733416 ES(ph)SPPREEAPPPPPPTEDSCAK ddPTM_A459_MK2206_30min_R1 1 ESSPPREEAPPPPPPTEDSCAK 22 1 C9JR56;Q9UPW6-2;Q9UPW6 C9JR56 SATB2 DNA-binding protein SATB;DNA-binding protein SATB2 1 ES(0.5)S(0.5)PPREEAPPPPPPTEDSCAK 72.086 0.033003 0 416.68 402.2 298.92 254.42 361.39 117.44 362.52 324.54 364.43 315.69 TRUE FALSE 381.2391779 376.0167069 278.6301432 274.0154725 346.995071 124.0893513 338.3369523 321.702581 402.3138026 354.8000605 1.074518356 1.05979888 0.785315941 0.772309543 0.978001724 0.349744448 0.953598914 0.906715124 1.13391695 1 8.470862446 -10.45002117 10.80344983 1 0.877859704 0.020307303 0.212732273 0 0 0.210472239 0.051047016 3.55E-11 10.45002117 -0.122140296 ES(ph)SPSHGLLK ddPTM_A459_MK2206_30min_R1 2 ESSPSHGLLK 10 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 ES(0.486)S(0.486)PS(0.028)HGLLK;ES(0.485)S(0.485)PS(0.03)HGLLK 90.913 0.028769 26165000 8576.3 6470.9 7023.9 5254.1 9515.6 9800.5 9307.9 8708.6 7155.9 6734.4 TRUE FALSE 7846.840649 6049.643234 6547.137238 5658.771692 9136.573502 10355.39584 8686.986974 8632.461628 7899.781413 7568.708314 1.036747662 0.799296654 0.865027025 0.747653557 1.207150959 1.368185351 1.147750265 1.140546216 1.043742351 1 12.88583139 -6.269634992 24.99261573 1.168930374 0.857892739 0.596614828 0.115867732 406.8905771 1240815.46 0.036468735 0.042052823 5.37E-07 6.269634992 -0.311037635 ES(ph)SPSHGLLK ddPTM_A459_MK2206_30min_R2 1 ESSPSHGLLK 10 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 ES(0.497)S(0.497)PS(0.007)HGLLK 93.623 0.016511 9989800 76876 108000 95107 111120 99903 108970 118350 92066 99078 101470 TRUE FALSE 82761.68567 102636.877 98277.81991 102041.1405 95980.30625 113116.9297 102810.5028 104099.3423 107695.6253 98159.04221 0.843138684 1.045618159 1.001210054 1.039549065 0.977804022 1.152384204 1.047386981 1.060517095 1.097154403 1 16.58283355 -4.119052015 1.514746216 1.052613732 3.34E-14 0.602435124 0.048963445 4.989458936 2.49911941 0.013576437 12.89291481 7.60E-05 4.119052015 -1.052613732 ES(ph)TGNMVTGQTVCK ddPTM_A459_MK2206_30min_R1 2 ESTGNMVTGQTVCK 14 0 Q15021;E7EN77 Q15021 NCAPD2 Condensin complex subunit 1 1 ES(0.943)T(0.057)GNMVTGQTVCK;ES(0.689)T(0.311)GNMVTGQTVCK 161.48 0.00028289 14268500 4327.8 4732.7 4733.5 4101.5 3860.4 4030.5 4051 3623.9 3981.7 4028.2 TRUE FALSE 3959.697884 4424.60037 4412.203208 4417.398241 3706.632093 4258.703427 3780.765181 3592.216624 4395.611964 4527.243827 0.874637646 0.977327606 0.974589259 0.975736764 0.818739223 0.940683469 0.835114106 0.793466568 0.970924503 1 12.14441729 -6.237992118 24.79384166 0.882302379 0.954199339 0.132046986 0.068569939 1155.654054 1222023.249 0.019533457 0.025203195 5.78E-07 6.237992118 0.071896959 ES(ph)TGNMVTGQTVCK ddPTM_A459_MK2206_30min_R2 5 ESTGNMVTGQTVCK 14 0 Q15021;E7EN77 Q15021 NCAPD2 Condensin complex subunit 1 1 ES(0.924)T(0.076)GNMVTGQTVCK;ES(0.892)T(0.108)GNMVTGQTVCK;ES(0.957)T(0.043)GNMVTGQTVCK;ES(0.77)T(0.23)GNMVTGQTVCK;ES(0.689)T(0.311)GNMVTGQTVCK 144.73 0.00032513 9410000 187080 197123 162957 192573 169299 170102 189048 149877 140139 164342 TRUE FALSE 201402.9886 187334.1585 168389.905 176839.1699 162651.4706 176575.3508 164225.7705 169466.4385 152328.0369 158979.534 1.266848528 1.178353929 1.059192343 1.112339214 1.023096914 1.110679761 1.032999446 1.065963865 0.9581613 1 17.27848153 -1.522878745 0.444768516 1.024178155 6.383086276 0.779543117 0.040359988 38.93981349 0.474533442 0.024829529 188.8663533 0.03 1.522878745 5.358908121 ES(ph)TQLSPADLTEGKPTDPSK ddPTM_A459_MK2206_30min_R2 1 ESTQLSPADLTEGKPTDPSK 20 1 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 ES(0.398)T(0.398)QLS(0.204)PADLTEGKPTDPSK 60.133 0.01667 5844800 33709 37665 38574 38744 44014 28023 39920 38766 26647 43680 TRUE FALSE 36289.78696 35794.61087 39860.03791 35578.49126 42285.78921 29089.4349 34678.45605 43832.8493 28964.70789 42254.72518 0.858833818 0.847114985 0.94332735 0.8420003 1.000735161 0.688430342 0.820700073 1.037347873 0.685478554 1 15.36682506 -10.75370407 3.735811338 1.000174492 0.863281219 0.129245452 0.10969683 150229793.8 208757898.1 303637.6319 0.026021254 1.76E-11 10.75370407 -0.136893272 ES(ph)VSPEDSEK ddPTM_A459_MK2206_30min_R2 1 ESVSPEDSEK 10 0 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 ES(0.8)VS(0.2)PEDSEK 191.33 0.00017799 9122300 66643 60357 49161 57165 50625 46564 73907 50344 32211 53439 TRUE FALSE 71745.23932 57359.75915 50800.0032 52494.43664 48637.20813 48336.02565 64202.92212 56924.13366 35012.65456 51695.28981 1.387848672 1.109574187 0.982681467 1.015458794 0.940844095 0.935017984 1.241949167 1.101147394 0.677289066 1 15.65774522 -4.76059942 2.228508443 0.996847019 1.502890874 0.44876437 0.134516126 0.662156591 3.68002847 0.036044671 0.686149733 1.74E-05 4.76059942 0.506043855 ES(ph)YAMT(ph)SAHERKKPLS(ph)NCIHPGFT(ph)GPK ddPTM_A459_MK2206_30min_R1 1 ESYAMTSAHERKKPLSNCIHPGFTGPK 27 3 Q8NDH2 Q8NDH2 CCDC168 Coiled-coil domain-containing protein 168 4 ES(0.548)Y(0.509)AMT(0.788)S(0.158)AHERKKPLS(0.998)NCIHPGFT(0.998)GPK 45.011 0.019373 4537800 481.88 301.53 365.25 319.32 508.82 660.29 843.17 387.69 552.37 594.31 TRUE FALSE 440.8935755 281.9003422 340.4578476 343.9140817 488.552622 697.6750492 786.9236678 384.3004672 609.7908382 667.9376096 0.660081974 0.422045919 0.509715043 0.51488953 0.731434516 1.044521283 1.17813948 0.575353838 0.912945804 1 9.38356954 -6.478322691 3.442646804 0.929382422 0.520070019 0.615630654 0.154167679 0.175674269 4.224732791 0.053674737 0.058780274 3.32E-07 6.478322691 -0.409312403 ES(ph)YSVYVYK ddPTM_A459_MK2206_30min_R1 2 ESYSVYVYK 9 0 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880 U3KQK0 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L 1 ES(0.998)YS(0.002)VYVYK;ES(0.98)YS(0.019)VYVYK 149.33 0.0014374 10009700 2842.7 4066.1 3750 2868.47 3568.8 3010.7 4681.8 3589.9 3363.8 2950.9 TRUE FALSE 2600.913437 3801.396151 3495.460448 3089.400056 3426.647139 3181.163232 4369.485664 3558.513883 3713.479047 3316.47977 0.784239199 1.146214183 1.053967065 0.931529896 1.033218164 0.959198745 1.317507106 1.072979222 1.11970502 1 11.69543701 ESAAPAAAPTAEAPPPS(ph)VVTRPEPQALPSPAIR ddPTM_A459_MK2206_30min_R1 1 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR 33 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 ESAAPAAAPTAEAPPPS(0.39)VVT(0.39)RPEPQALPS(0.221)PAIR 97.819 3.76E-11 81461000 2309 2301.5 1710.3 1635.1 2158.8 1628.5 2082.2 2095.3 1610.2 1559 TRUE FALSE 2112.607425 2151.671932 1594.209601 1761.035685 2072.810425 1720.704263 1943.300237 2076.981013 1777.586052 1752.14069 1.205729333 1.228024635 0.909863923 1.005076645 1.183015974 0.982058275 1.10910057 1.185396256 1.014522442 1 10.77490291 -5.215741201 24.98928551 1.058276742 1.216877166 0.387115296 0.083980564 468.8667422 256390.3048 0.021709142 0.057436537 6.08E-06 5.215741201 0.158600425 ESAAPAAAPTAEAPPPS(ph)VVTRPEPQALPSPAIR ddPTM_A459_MK2206_30min_R2 2 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR 33 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 ESAAPAAAPTAEAPPPS(0.393)VVT(0.393)RPEPQALPS(0.214)PAIR;ESAAPAAAPT(0.073)AEAPPPS(0.346)VVT(0.346)RPEPQALPS(0.235)PAIR 89.723 8.43E-09 72177000 84488 100671 99261 109815 101065 114862 97448 64528 89882 113326 TRUE FALSE 90956.46624 95671.82453 102570.3122 100842.7632 97096.68029 119233.1539 84652.96054 72962.03116 97699.77389 109628.1819 0.829681426 0.872693708 0.935619933 0.919861677 0.885690874 1.087614077 0.772182472 0.66554083 0.891192139 1 16.74225919 -8.559421339 21.27622497 1.000000008 0.873032855 0.120856724 0.103642949 5439.69907 3167158.485 0.107442923 0.027741643 2.76E-09 8.559421339 -0.126967153 ESAAPAAAPTAEAPPPSVVT(ph)RPEPQALPSPAIR ddPTM_A459_MK2206_30min_R1 1 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR 33 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 ESAAPAAAPT(0.007)AEAPPPS(0.346)VVT(0.373)RPEPQALPS(0.273)PAIR 68.43 0.00017749 96350000 4821.1 4216.7 3805.1 3603.7 4241.9 3467.6 4275.6 3484.4 3331.3 2962.8 TRUE FALSE 4411.040128 3942.192064 3546.820414 3881.257598 4072.936141 3663.932515 3990.382525 3453.936258 3677.600556 3329.854032 1.324694742 1.183893356 1.065157926 1.165593915 1.223157562 1.100328267 1.1983656 1.037263563 1.104432963 1 11.70124322 -1.522878756 0.077767324 0.869638648 1.835000619 0.499736851 0.065442624 193.0233412 1.10183595 2.134021555 20.09135546 0.029999999 1.522878756 0.965361971 ESAAPAAAPTAEAPPPSVVTRPEPQALPS(ph)PAIR ddPTM_A459_MK2206_30min_R2 2 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR 33 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 ESAAPAAAPT(0.001)AEAPPPS(0.145)VVT(0.124)RPEPQALPS(0.73)PAIR;ESAAPAAAPTAEAPPPS(0.028)VVT(0.028)RPEPQALPS(0.944)PAIR 83.467 5.96E-07 83827000 162034 185046 158983 187561 167107 160271 158244 122037 126863 142366 TRUE FALSE 174439.4476 175856.8847 164283.4139 172236.6663 160545.5395 166370.2252 137466.3727 137987.6549 137897.3144 137720.6091 1.266618328 1.276910449 1.192874581 1.250623763 1.165733586 1.20802708 0.99815397 1.00193904 1.001283071 1 17.07138494 -7.233734872 4.069195242 0.998349205 1.228344682 0.927024262 0.031151778 0.058327851 2.227910215 0.013829534 0.010017012 5.84E-08 7.233734872 0.229995477 ESADPLGAWLQDAR ddPTM_A459_MK2206_30min_R1 1 ESADPLGAWLQDAR 14 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 155.88 0.0045018 2019000 819.48 861.02 735.51 1295.1 908.2 948.04 941.89 1126.5 744.77 632.85 FALSE TRUE 749.7789227 804.9674415 685.5856304 1394.848826 872.0244709 1001.717206 879.0582367 1116.651129 822.1915067 711.2522358 1.054167404 1.131760859 0.963913498 1.961116966 1.226041096 1.408385317 1.235930367 1.569979078 1.155977395 1 9.474217472 ESAIAEGGAS(ph)R ddPTM_A459_MK2206_30min_R2 1 ESAIAEGGASR 11 0 P78344-2;P78344 P78344-2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 ESAIAEGGAS(1)R 84.687 0.035931 33516000 4042.6 24128 12468 129140 36103 16637 12287 11225 13461 16098 TRUE FALSE 4352.104564 22929.83861 12883.6769 118588.8489 34685.41482 17270.13269 10673.70214 12692.14604 14631.81345 15572.72358 0.279469711 1.472435987 0.827323289 7.615164316 2.227318468 1.10899886 0.685410107 0.815024166 0.939579604 1 13.92673366 -6.74361307 4.801111842 0.869067745 2.639833703 0.149977919 1.874303555 0.384814028 22.41624386 0.690922202 0.658228315 1.80E-07 6.74361307 1.770765958 ESAS(ph)PTIPNLDLLEAHTK ddPTM_A459_MK2206_30min_R1 2 ESASPTIPNLDLLEAHTK 18 0 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 ES(0.216)AS(0.707)PT(0.078)IPNLDLLEAHTK;ES(0.046)AS(0.953)PTIPNLDLLEAHTK 246.98 6.01E-33 47744000 12036.9 13408.5 13332.7 10226.2 12810.5 11785.1 11706.2 11530.2 11181.4 8399.9 TRUE FALSE 11013.09845 12535.60421 12427.71347 11013.8237 12300.23066 12452.36218 10925.30076 11429.39268 12343.74654 9440.543028 1.166574678 1.327847792 1.316419345 1.166651501 1.302915587 1.319030287 1.157274611 1.210671107 1.307525055 1 13.20465413 -11.44576848 2.483962704 0.836800232 1.253692358 0.559117544 0.067332345 14465143.57 6881843.675 13702142.98 0.016605348 3.58E-12 11.44576848 0.416892125 ESAS(ph)PTIPNLDLLEAHTK ddPTM_A459_MK2206_30min_R2 3 ESASPTIPNLDLLEAHTK 18 0 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 ES(0.178)AS(0.821)PTIPNLDLLEAHTK;ES(0.161)AS(0.839)PTIPNLDLLEAHTK;ES(0.419)AS(0.577)PT(0.004)IPNLDLLEAHTK 178.22 1.22E-09 52517800 132971 145571 116856 150955 129559 128798 163425 136434 105578 129114 TRUE FALSE 143151.362 138342.1558 120751.9207 138621.4936 124471.8627 133699.4981 141967.1012 154266.3922 114760.9836 124901.0208 1.146118431 1.107614293 0.966780896 1.109850766 0.996564015 1.070443599 1.136636837 1.235109139 0.918815418 1 16.93042574 -7.017397213 24.29704824 1.093848127 1.061601942 0 0.092756969 2573.654522 3594378.439 0.034225164 0.027161113 9.61E-08 7.017397213 -0.032246185 ESCS(ph)SPSTVGSSLTTR ddPTM_A459_MK2206_30min_R1 2 ESCSSPSTVGSSLTTR 16 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4;H0YEP9 Q7Z589 EMSY;C11orf30 Protein EMSY 1 ES(0.087)CS(0.815)S(0.087)PS(0.004)T(0.004)VGS(0.002)S(0.002)LTTR;ESCS(0.961)S(0.038)PS(0.001)TVGSSLTTR 189.33 9.57E-07 26254000 6710.7 6304.6 6824.9 5366.9 7464.4 6276.9 7122.2 6462.4 5877.7 6418.9 TRUE FALSE 6139.919726 5894.169394 6361.644803 5780.259568 7167.077142 6632.292654 6647.091033 6405.899918 6488.707949 7214.121792 0.85109732 0.817032144 0.881832188 0.801242304 0.993478811 0.919348584 0.921399891 0.8879667 0.899445301 1 12.81660806 -6.251311973 24.99911093 0.929681653 0.839462586 0.596439813 0.039672348 537.7172236 1327333.719 0.011584299 0.014776568 5.61E-07 6.251311973 -0.090219067 ESCS(ph)SPSTVGSSLTTR ddPTM_A459_MK2206_30min_R2 1 ESCSSPSTVGSSLTTR 16 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4;H0YEP9 Q7Z589 EMSY;C11orf30 Protein EMSY 1 ES(0.001)CS(0.976)S(0.023)PSTVGSSLTTR 271.43 1.45E-50 17333000 18738 19669 18433 24012 19071 21384 20829 16645 19510 18206 TRUE FALSE 20172.59569 18692.26606 19047.54702 22050.14279 18322.17672 22197.7831 18094.12728 18820.55865 21206.94453 17611.93971 1.145393183 1.061340566 1.081513299 1.251999675 1.040327018 1.260382642 1.027378448 1.068624976 1.204123162 1 14.10426619 -10.72921299 4.565223408 0.999971379 1.123965163 0.176866102 0.081852245 2.34E-05 4.07E-06 0.075385501 0.018279319 1.87E-11 10.72921299 0.123993784 ESCSS(ph)PSTVGSSLTTR ddPTM_A459_MK2206_30min_R2 1 ESCSSPSTVGSSLTTR 16 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4;H0YEP9 Q7Z589 EMSY;C11orf30 Protein EMSY 1 ESCS(0.001)S(0.94)PS(0.029)T(0.029)VGSSLTTR 226.65 4.63E-15 21794000 25952 28278 27090 30622 28748 28097 35233 23802 25719 30718 TRUE FALSE 27938.90507 26873.75564 27993.16708 28120.08465 27619.20907 29166.25102 30606.86478 26913.00312 27955.99213 29715.67418 0.94020768 0.90436298 0.94203372 0.946304784 0.929449183 0.981510662 1.02999059 0.905683747 0.940782698 1 14.85893649 -6.752364092 24.76667306 0.96934859 0.932209799 0.260735444 0.032827292 280.0784354 764338.4955 0.01150211 0.011340724 1.77E-07 6.752364092 -0.03713879 ESDESGES(ph)APDEGGEGAR ddPTM_A459_MK2206_30min_R1 1 ESDESGESAPDEGGEGAR 18 0 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 ESDES(0.215)GES(0.785)APDEGGEGAR 114.58 0.0010845 559920 0 76.7 149.71 0 131.79 175.03 68.15 185.21 0 65.753 TRUE FALSE 0 71.70681606 139.5481023 0 126.5405252 184.9400473 63.60383785 183.5907285 0 73.89897805 0 0.970335693 1.888363087 0 1.712344725 2.502606291 0.860686298 2.484347326 0 1 6.207482508 -6.310659209 24.99948625 1.526379852 0.816768861 0.130034653 0.86379875 761.5830532 386817.4228 0.258610918 0.293237683 4.89E-07 6.310659209 -0.709610991 ESDKEDGRES(ph)PSYDTPSQR ddPTM_A459_MK2206_30min_R2 1 ESDKEDGRESPSYDTPSQR 19 2 Q9Y6M7-6;Q9Y6M7-13;Q9Y6M7-11;C9JRP1;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7-7;Q9Y6M7-14;Q9Y6M7;Q9Y6M7-8;E9PFN4;A0A0A0MST8;Q9Y6M7-10;Q9Y6M7-12 Q9Y6M7-6 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 ESDKEDGRES(0.869)PS(0.065)Y(0.052)DT(0.011)PS(0.003)QR 72.428 0.014454 15165000 18027 9682.3 13808 12969 11168 10133 23265 12196 16863 15940 TRUE FALSE 19407.16098 9201.491061 14268.35183 11909.39121 10729.48821 10518.61842 20210.27755 13790.05908 18329.71326 15419.87911 1.258580618 0.596729131 0.9253219 0.772340116 0.695821811 0.68214662 1.310663814 0.894303968 1.188706677 1 13.91250383 -7.249237396 24.98866261 1.089610623 0.808319708 0.315165867 0.198978462 879.4813683 1801108.507 0.0724418 0.055691187 5.63E-08 7.249237396 -0.281290915 ESDQTLAALLS(ph)PK ddPTM_A459_MK2206_30min_R1 6 ESDQTLAALLSPK 13 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQT(0.008)LAALLS(0.992)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK 203.2 6.18E-05 948364000 33274.7 42724.8 41808.9 33751.6 23981.8 21641.3 29472.1 28702.8 36145.7 34941.8 TRUE FALSE 30444.51203 39943.40775 38971.02835 36351.15408 23026.55412 22866.6117 27506.06998 28451.85445 39903.17486 39270.65398 0.775248409 1.017131209 0.992370241 0.925656957 0.58635525 0.582282427 0.700423018 0.724506764 1.016106706 1 15.261164 -6.127094646 8.844057056 0.741984549 0.940642563 0.197065603 0.151451425 0.438094393 29.33316279 0.045413518 0.058726054 7.46E-07 6.127094646 0.198658014 ESDQTLAALLS(ph)PK ddPTM_A459_MK2206_30min_R2 7 ESDQTLAALLSPK 13 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQT(0.001)LAALLS(0.999)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK 181.58 0.00011519 379686800 439096.6 431808.9 436445.6 353408.4 377963 267201.1 455559.9 347794.4 277580.8 477351 TRUE FALSE 472714.1733 410365.8979 450996.4785 324533.8032 363122.2735 277369.6251 395744.3379 393252.3222 301724.2762 461775.076 1.023689233 0.888670522 0.976658339 0.702796275 0.786361786 0.600659584 0.857006708 0.851610108 0.653400956 1 18.81683078 -5.752915318 24.99404755 0.768797683 0.955572532 0.36218555 0.111312693 193.8632507 568435.1897 0.029034931 0.049274785 1.77E-06 5.752915318 0.18677485 ESDSAEGDEAES(ph)PEQQVR ddPTM_A459_MK2206_30min_R1 2 ESDSAEGDEAESPEQQVR 18 0 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3 DENND1A DENN domain-containing protein 1A 1 ESDSAEGDEAES(1)PEQQVR;ESDSAEGDEAES(1)PEQQVR 271.27 4.19E-112 2210600 781.5 698.27 623.67 611.98 1019.12 678.26 882 753.57 592.25 786.85 TRUE FALSE 715.0293212 652.8124961 581.337018 659.1148056 978.5262924 716.6624951 823.1633893 746.9816169 653.8165069 884.3309184 0.808554022 0.738199335 0.657374978 0.745325977 1.106515979 0.810400813 0.930831855 0.844685628 0.739334669 1 9.78844252 -6.03920086 24.99324166 0.896957622 0.729440315 0.396746781 0.101132809 546.5565635 348466.4059 0.029568243 0.038179529 9.14E-07 6.03920086 -0.167517307 ESDSAEGDEAES(ph)PEQQVR ddPTM_A459_MK2206_30min_R2 2 ESDSAEGDEAESPEQQVR 18 0 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3 DENND1A DENN domain-containing protein 1A 1 ESDSAEGDEAES(1)PEQQVR;ESDSAEGDEAES(1)PEQQVR 302.9 7.92E-96 5844300 10795 14557.4 16206.5 21057.4 18390.8 17982.1 19096.7 17028 14136.7 18909.1 TRUE FALSE 11621.4735 13834.50068 16746.81662 19336.94306 17668.68479 18666.42142 16589.28035 19253.61807 15366.28461 18292.09762 0.635327547 0.756310237 0.915521936 1.057120045 0.965919008 1.020463689 0.906909678 1.0525648 0.840050438 1 14.1589329 -5.155058862 2.168353878 0.978781133 0.63774696 0.764735968 0.063082238 0.157573311 1.304444168 0.016308711 0.075882347 7.00E-06 5.155058862 -0.341034173 ESDTKNEVNGTSEDIKSEGDT(ph)QSN ddPTM_A459_MK2206_30min_R1 2 ESDTKNEVNGTSEDIKSEGDTQSN 24 2 O95232 O95232 LUC7L3 Luc7-like protein 3 1 ESDTKNEVNGTSEDIKS(0.315)EGDT(0.651)QS(0.033)N;ESDTKNEVNGTSEDIKS(0.165)EGDT(0.67)QS(0.165)N 121.59 4.85E-07 55516000 5444.7 6977.4 7064.6 6229.6 3744.2 3694.3 4351.1 5123.7 5463.4 3840.2 TRUE FALSE 4981.599674 6523.169992 6585.074635 6709.404871 3595.060586 3903.468073 4060.846058 5078.904031 6031.339981 4315.952968 1.15422937 1.511408961 1.525752177 1.554559311 0.832970288 0.904427852 0.940892101 1.176774647 1.397452666 1 12.07546343 -6.252797378 24.98045328 1.038982361 1.448215055 0.532731645 0.180808495 527.8827836 1525889.823 0.057605507 0.073179439 5.59E-07 6.252797378 0.409232694 ESDTKNEVNGTSEDIKSEGDT(ph)QSN ddPTM_A459_MK2206_30min_R2 1 ESDTKNEVNGTSEDIKSEGDTQSN 24 2 O95232 O95232 LUC7L3 Luc7-like protein 3 1 ESDTKNEVNGTSEDIKS(0.147)EGDT(0.426)QS(0.426)N 56.234 0.045836 10590000 29825 42958 34316 32945 44792 24138 36436 36175 32499 35379 TRUE FALSE 32108.42493 40824.76819 35460.07831 30253.28811 43033.24102 25056.5885 31651.90943 40903.19671 35325.70428 34224.58613 0.938168392 1.192849142 1.036099551 0.883963593 1.257377981 0.732122469 0.924829575 1.195140726 1.032173308 1 15.06274547 -3.740259358 14.81128837 1.022237701 1.029248107 0 0.153271857 0 0 0.034480238 0 0.000181861 3.740259358 0.007010405 ESDTKNEVNGTSEDIKSEGDTQS(ph)N ddPTM_A459_MK2206_30min_R1 3 ESDTKNEVNGTSEDIKSEGDTQSN 24 2 O95232 O95232 LUC7L3 Luc7-like protein 3 1 ESDTKNEVNGTSEDIKSEGDT(0.006)QS(0.994)N;ESDTKNEVNGTSEDIKSEGDT(0.007)QS(0.993)N;ESDTKNEVNGTSEDIKSEGDT(0.013)QS(0.987)N 148.26 1.73E-09 63999000 7423.8 7794.34 8326.13 7032.94 5336.9 4641.85 5555.81 6621.14 5514.65 4583.89 TRUE FALSE 6792.366826 7286.927049 7760.975494 7574.618257 5124.319972 4904.667536 5185.192052 6563.252071 6087.917602 5151.7769 1.318451276 1.414449265 1.506465758 1.470292368 0.994670397 0.952034149 1.006486141 1.273978318 1.181712198 1 12.3308544 -6.257541345 25 1.072957107 1.432135088 0.750427902 0.101462971 190.2747819 1220324.297 0.034201404 0.042483199 5.53E-07 6.257541345 0.359177982 ESDTKNEVNGTSEDIKSEGDTQS(ph)N ddPTM_A459_MK2206_30min_R2 5 ESDTKNEVNGTSEDIKSEGDTQSN 24 2 O95232 O95232 LUC7L3 Luc7-like protein 3 1 ESDTKNEVNGTSEDIKS(0.103)EGDT(0.097)QS(0.8)N;ESDTKNEVNGTSEDIKSEGDT(0.009)QS(0.991)N;ESDTKNEVNGTSEDIKSEGDT(0.004)QS(0.996)N;ESDTKNEVNGTSEDIKS(0.008)EGDT(0.036)QS(0.956)N;ESDTKNEVNGTSEDIKSEGDT(0.005)QS(0.995)N 115.06 1.71E-07 161667000 275603 426973 400660 387518 422610 264596 436175 317685 312548 362954 TRUE FALSE 296703.3776 405770.1417 414017.8044 355856.5398 406016.208 274665.3862 378904.6986 359207.5203 339732.8601 351110.8407 0.845041916 1.155675344 1.179165541 1.013516242 1.156376166 0.782275437 1.079159783 1.023060181 0.967594334 1 18.42156702 ESEAGTGSS(ph)EHEDGER ddPTM_A459_MK2206_30min_R1 1 ESEAGTGSSEHEDGER 16 0 Q8TDJ6-3;Q8TDJ6;Q8TDJ6-2 Q8TDJ6-3 DMXL2 DmX-like protein 2 1 ESEAGTGS(0.081)S(0.918)EHEDGER 79.565 0.016194 503980 401.28 371.93 238.27 142.42 381.48 255.57 246.8 301.36 341.29 293.82 TRUE FALSE 367.1490288 347.7172894 222.0968963 153.3892131 366.2848438 270.0401525 230.3364223 298.7252413 376.7683168 330.2206398 1.111829439 1.052984724 0.672571213 0.464505226 1.109212447 0.817756736 0.697522791 0.904623168 1.14095932 1 8.367286486 -8.093939842 5.348422297 1.064531582 0.839515158 0.164597134 0.197980594 0.428341862 18.73626141 0.146479692 0.053665018 8.05E-09 8.093939842 -0.225016424 ESEAGTGSS(ph)EHEDGER ddPTM_A459_MK2206_30min_R2 2 ESEAGTGSSEHEDGER 16 0 Q8TDJ6-3;Q8TDJ6;Q8TDJ6-2 Q8TDJ6-3 DMXL2 DmX-like protein 2 1 ESEAGTGS(0.23)S(0.769)EHEDGER;ESEAGT(0.001)GS(0.089)S(0.91)EHEDGER 82.755 0.014362 1243200 6525.7 3844.3 5276.7 7576.1 8750.8 6701.9 3214 5021.2 7093 5107.87 TRUE FALSE 7025.312609 3653.397652 5452.622544 6957.108395 8407.199623 6956.945501 2791.997939 5677.48808 7709.936319 4941.20062 1.421782508 0.739374483 1.10350155 1.407979341 1.701448751 1.407946375 0.56504444 1.149009829 1.560336629 1 12.27064592 -10.88226188 3.507689705 0.998796341 1.213046367 0.037874788 0.337501906 260895610.8 506317309.7 3433057.499 0.08931157 1.31E-11 10.88226188 0.214250027 ESEAGTGSSEHEDGEREGS(ph)PR ddPTM_A459_MK2206_30min_R1 2 ESEAGTGSSEHEDGEREGSPR 21 1 Q8TDJ6-3;Q8TDJ6;Q8TDJ6-2 Q8TDJ6-3 DMXL2 DmX-like protein 2 1 ESEAGT(0.01)GS(0.008)S(0.003)EHEDGEREGS(0.979)PR;ESEAGTGSS(0.001)EHEDGEREGS(0.999)PR 53.327 0.017213 1496570 463.334 442.17 528.59 313.092 675.97 982.17 625.01 666.9 281.92 355.1 TRUE FALSE 423.9250102 413.3846526 492.7107835 337.2064001 649.0446835 1037.779617 583.3167233 661.0693636 311.2265929 399.0924689 1.062222526 1.03581171 1.234578004 0.844933008 1.626301507 2.600348785 1.461607945 1.656431567 0.779835795 1 8.640579244 -6.274640627 23.93057056 1.604598313 1.057358971 0.190087475 0.462375897 663.508601 1202772.791 0.147002989 0.167787556 5.31E-07 6.274640627 -0.547239342 ESEDDPES(ph)EPDDHEK ddPTM_A459_MK2206_30min_R2 3 ESEDDPESEPDDHEK 15 0 P16383-3;P16383-4;P16383 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 1 ESEDDPES(1)EPDDHEK;ESEDDPES(1)EPDDHEK;ESEDDPES(1)EPDDHEK 118.72 0.0014445 5223600 84972 98087 85161.2 87489 84902.3 72539 90773 66806.6 71902.9 92973 TRUE FALSE 91477.52165 93216.14221 88000.4319 80340.86884 81568.6091 75299.52248 78854.39606 75538.452 78156.88427 89939.29862 1.017102902 1.036433946 0.978442497 0.893278801 0.906929566 0.837226036 0.87675129 0.8398826 0.868995928 1 16.45666401 -5.666179983 2.070801913 0.877336197 1.02878035 0.622759201 0.043916512 0.182365621 1.580978394 0.01239481 0.026617792 2.16E-06 5.666179983 0.151444153 ESEDKPEIEDVGS(ph)DEEEEK ddPTM_A459_MK2206_30min_R1 5 ESEDKPEIEDVGSDEEEEK 19 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK 206.95 1.33E-16 630034000 24810.6 33987.8 34553.1 19059.8 12879.9 14158.6 27713.1 20984.9 53897.4 77455 TRUE FALSE 22700.32818 31775.18804 32207.73184 20527.7891 12366.86631 14960.2477 25864.40966 20801.43123 59500.2276 87050.71016 0.260771315 0.365019286 0.369988157 0.235814149 0.142065082 0.171856699 0.297118882 0.238957628 0.68351226 1 16.40956845 -8.462072109 2.663113439 0.99719544 0.258999103 0.920806392 0.071105062 0.070635063 1.083451597 0.077548817 0.021014947 3.45E-09 8.462072109 -0.738196337 down ESEDKPEIEDVGS(ph)DEEEEK ddPTM_A459_MK2206_30min_R2 9 ESEDKPEIEDVGSDEEEEK 19 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK 154.08 4.88E-06 2370739600 1181063 529130 790303 455522 449553 279863.2 753241 592197 352558 937660 TRUE FALSE 1271486.091 502854.1736 816651.3076 418304.3955 431901.2904 290513.5902 654339.5519 669599.1812 383222.8576 907064.231 1.401759708 0.554375486 0.900323571 0.461162927 0.476152929 0.320278962 0.721381716 0.738204813 0.422487013 1 19.79084519 -3.305146267 11.44512264 0.671113016 0.825214219 0 0.313399508 0 0 0.069846678 0 0.000495283 3.305146267 0.154101203 ESEDKPEIEDVGS(ph)DEEEEKK ddPTM_A459_MK2206_30min_R1 9 ESEDKPEIEDVGSDEEEEKK 20 2 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK 136.77 0.00011252 2863484400 24942.85 39021.33 36716.45 22488.94 12879.8 12163 23646.08 20591.07 50969.9 70262.8 TRUE FALSE 22821.32963 36481.03432 34224.23967 24221.04206 12366.77029 12851.65855 22068.69315 20411.04445 56268.4035 78967.48612 0.288996532 0.461975379 0.433396596 0.306721706 0.15660585 0.162746203 0.279465565 0.258474031 0.712551536 1 16.26897114 -8.452007849 2.946859315 0.995899115 0.294193842 0.859614912 0.094296187 0.092665857 1.672419368 0.10506524 0.028202936 3.53E-09 8.452007849 -0.701705273 down ESEDKPEIEDVGS(ph)DEEEEKK ddPTM_A459_MK2206_30min_R2 6 ESEDKPEIEDVGSDEEEEKK 20 2 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK 118.05 0.00029416 2222677000 846601 380818 549143 282990 299961 148943.7 528824 373637 210984.6 686981 TRUE FALSE 911417.4235 361907.1319 567451.1535 259868.8118 288183.024 154611.8569 459388.7736 422472.6388 229335.6591 664564.8662 1.371449906 0.544577588 0.853868723 0.391036037 0.433641678 0.232651265 0.691262504 0.635713172 0.345091459 1 19.3420505 -3.048476558 11.20908581 0.618891709 0.821082418 0 0.329883114 0 0 0.073924553 0 0.000894383 3.048476558 0.20219071 ESEDKPEIEDVGS(ph)DEEEEKKDGDK ddPTM_A459_MK2206_30min_R1 2 ESEDKPEIEDVGSDEEEEKKDGDK 24 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK 93.5 1.54E-05 1172571000 15335.8 34078.6 26380.7 19582.1 5546.1 6232.8 12872.3 12366.6 33009.3 37518.2 TRUE FALSE 14031.40968 31860.07695 24590.05158 21090.31673 5325.187093 6585.69575 12013.61235 12258.48012 36440.73486 42166.23786 0.332764088 0.755582631 0.583169209 0.500170701 0.126290306 0.156184096 0.2849107 0.2907179 0.864215939 1 15.36380069 -8.360042306 4.381339124 0.985539136 0.383525401 0.596731829 0.18291492 0.176360669 5.433034408 0.200277252 0.052847012 4.36E-09 8.360042306 -0.602013735 ESEDKPEIEDVGS(ph)DEEEEKKDGDK ddPTM_A459_MK2206_30min_R2 2 ESEDKPEIEDVGSDEEEEKKDGDK 24 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK 69.081 0.0012954 5221400000 967130 702150 809940 367260 376080 146198 679430 502040 279938 929000 TRUE FALSE 1041174.216 667282.252 836942.9954 337253.6832 361313.2095 151761.6673 590220.0249 567658.3518 304286.5012 898686.8061 1.158550687 0.742508121 0.931295519 0.375273878 0.402045748 0.168870474 0.656758307 0.63165315 0.338590151 1 19.7774589 -3.464499271 11.38411857 0.614597645 0.804376532 0 0.306668217 0 0 0.07242834 0 0.000343163 3.464499271 0.189778886 ESEDKPEIEDVGSDEEEEKKDGDK ddPTM_A459_MK2206_30min_R1 1 ESEDKPEIEDVGSDEEEEKKDGDK 24 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 47.814 0.02537 44487000 2338.2 4502.6 4714.4 3037.4 1383.8 1070 2357.6 2229.4 5396.5 5823.8 FALSE TRUE 2139.323812 4209.479922 4394.399663 3271.341074 1328.680316 1130.582475 2200.328806 2209.908591 5957.485487 6545.296311 0.326849039 0.643130535 0.671382846 0.499800302 0.202997733 0.172732054 0.336169472 0.337633086 0.910193397 1 12.67624279 -8.307966994 5.407499684 0.976334142 0.403053673 0.66499392 0.158044319 0.147565401 10.2598654 0.169947796 0.045898432 4.92E-09 8.307966994 -0.573280469 ESEDSETQPFDTHLEAYGPCLS(ph)PPR ddPTM_A459_MK2206_30min_R1 4 ESEDSETQPFDTHLEAYGPCLSPPR 25 0 Q14676-3;Q14676 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 ESEDSETQPFDTHLEAYGPCLS(1)PPR;ESEDSETQPFDTHLEAYGPCLS(1)PPR;ESEDSETQPFDT(0.001)HLEAYGPCLS(0.998)PPR;ESEDSETQPFDTHLEAYGPCLS(1)PPR 167.97 2.96E-16 150555000 5920.55 5327.77 4843.5 4911.95 5703.85 6390.8 5240.09 4500.59 4649.47 3808 TRUE FALSE 5416.976132 4980.931205 4514.736715 5290.26924 5476.653576 6752.641573 4890.533157 4461.241816 5132.799045 4279.763789 1.265718483 1.163833204 1.054903246 1.236112435 1.279662581 1.577807072 1.142711 1.042403748 1.199318303 1 12.06331546 -10.4519212 6.743946714 0.999999987 1.21720128 0.174601766 0.142218524 3.02E-08 4.61E-09 0.148977419 0.036132329 3.53E-11 10.4519212 0.217201293 ESEDSETQPFDTHLEAYGPCLS(ph)PPR ddPTM_A459_MK2206_30min_R2 5 ESEDSETQPFDTHLEAYGPCLSPPR 25 0 Q14676-3;Q14676 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 ESEDSETQPFDTHLEAY(0.001)GPCLS(0.999)PPR;ESEDSETQPFDT(0.005)HLEAY(0.001)GPCLS(0.995)PPR;ESEDSETQPFDTHLEAY(0.003)GPCLS(0.997)PPR;ESEDSETQPFDTHLEAYGPCLS(1)PPR;ESEDSETQPFDTHLEAYGPCLS(1)PPR 117.99 5.14E-08 131452200 48504.3 61392.1 54469.2 65408.8 57563 51374.3 63404.6 46126.3 46407.1 52920.3 TRUE FALSE 52217.8265 58343.45759 56285.17594 60064.69181 55302.78739 53329.38499 55079.49986 52155.16579 50443.50567 51193.51494 1.020008619 1.139665007 1.099459101 1.173287122 1.080269394 1.041721496 1.075907757 1.018784622 0.985349526 1 15.64367344 -7.480379825 0.95585705 0.991444245 1.107463612 0.520449386 0.040431046 0.452185478 0.768256649 0.033253308 0.016202594 3.31E-08 7.480379825 0.116019366 ESEEGNPVRGSEEDS(ph)PKKESK ddPTM_A459_MK2206_30min_R1 1 ESEEGNPVRGSEEDSPKKESK 21 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ESEEGNPVRGS(0.001)EEDS(0.993)PKKES(0.006)K 51.348 0.038136 10587000 1851.7 2418.1 2840.2 3287.2 1850.7 1102.5 1177 2226.4 1218.9 586.8 TRUE FALSE 1694.203191 2260.68125 2647.415137 3540.380714 1776.9827 1164.922597 1098.484478 2206.93482 1345.609017 659.4972141 2.568931536 3.427885975 4.014293132 5.368302758 2.694450654 1.766379861 1.665639299 3.346389905 2.040355877 1 9.365222755 -6.510526113 23.87808021 2.107174953 3.852698468 0.518053454 0.850220106 293.8146898 567955.9128 0.27974577 0.30141568 3.09E-07 6.510526113 1.745523515 ESEGFEEHVPSDNS(ph) ddPTM_A459_MK2206_30min_R2 1 ESEGFEEHVPSDNS 14 0 P62699 P62699 YPEL5 Protein yippee-like 5 1 ESEGFEEHVPS(0.037)DNS(0.963) 92.039 0.024607 0 14085 20433 15822 20797 18580 23162 24267 13811 16734 16604 TRUE FALSE 15163.35843 19418.32693 16349.49758 19097.81857 17850.45584 24043.44614 21080.71375 15616.14512 18189.49307 16062.21284 0.944039192 1.208944691 1.017885751 1.188990506 1.111332294 1.496895003 1.31244144 0.972228751 1.132440048 1 13.97138304 -4.755252119 24.83324921 1.169476542 0.944038785 0.154927919 0.149980521 376.2541785 1509978.797 0.039079882 0.35104553 1.76E-05 4.755252119 -0.225437756 ESEKS(ph)LENETLNK ddPTM_A459_MK2206_30min_R1 1 ESEKSLENETLNK 13 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 ES(0.002)EKS(0.998)LENETLNK 109.84 0.027523 5587800 1072.1 914.21 870.21 827.96 610.01 424.15 787.18 868.01 990.95 1214.1 TRUE FALSE 980.9122652 854.6947628 811.1425697 891.7296227 585.71201 448.1650065 734.6686585 860.4210801 1093.962799 1364.511874 0.718874115 0.626374002 0.594456219 0.653515473 0.429246547 0.328443464 0.538411334 0.630570607 0.801724646 1 10.41416923 -8.422508879 1.875323473 0.995286323 0.551251651 0.64455903 0.105930138 0.224690356 1.675278468 0.113295305 0.032368914 3.78E-09 8.422508879 -0.444034672 ESEKS(ph)LENETLNK ddPTM_A459_MK2206_30min_R2 1 ESEKSLENETLNK 13 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 ES(0.002)EKS(0.998)LENETLNK 117.2 0.017383 12897000 89054 55226 69129 50553 60799 46145 92790 65629 50219 85935 TRUE FALSE 95872.04271 52483.55715 71433.72636 46422.65819 58411.72577 47901.08031 80606.56154 74206.93564 54586.95784 83130.94799 1.153265361 0.631335964 0.859291613 0.55842811 0.702647175 0.576212367 0.969633614 0.892651142 0.656638222 1 16.34309804 -10.14544571 10.52475193 0.999999979 0.770310931 0.117922719 0.181287288 0 0 0.171233384 0.041530196 7.15E-11 10.14544571 -0.229689049 ESENSGDSGYPS(ph)EK ddPTM_A459_MK2206_30min_R1 1 ESENSGDSGYPSEK 14 0 O00418 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 ESENSGDSGYPS(1)EK 239.58 1.72E-19 6758200 2955.5 1782.5 3059.5 2145.5 1513.7 1090.8 1526.8 1709.2 2039.4 1905.8 TRUE FALSE 2704.119205 1666.458926 2851.829664 2310.746782 1453.406124 1152.560153 1424.949958 1694.256645 2251.402928 2141.904892 1.262483323 0.778026574 1.331445516 1.078827912 0.678557731 0.538100528 0.665272283 0.79100461 1.051121801 1 11.06467871 -6.231819016 9.483655178 0.758349739 1.104792012 0.387998077 0.198088998 0.478471249 148.5894238 0.059256588 0.075841148 5.86E-07 6.231819016 0.346442273 ESENSGDSGYPS(ph)EK ddPTM_A459_MK2206_30min_R2 4 ESENSGDSGYPSEK 14 0 O00418 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 ESENSGDSGYPS(1)EK;ESENSGDSGYPS(1)EK;ESENSGDSGYPS(1)EK;ES(0.002)ENSGDS(0.002)GYPS(0.995)EK 215.15 6.23E-07 35536500 209752 169873 145493 118147 149653 122326 182835 109662 86335 132114 TRUE FALSE 225810.7744 161437.3538 150343.664 108494.0122 143776.8713 126981.2016 158828.5449 123995.1999 93844.26224 127803.131 1.766864181 1.263172135 1.176369177 0.848915135 1.124987081 0.993568785 1.242759419 0.970204712 0.734287662 1 16.96356366 -4.354655403 1.124265818 1.002918584 2.946372182 0.745928852 0.136343414 1.929830788 1.063009266 0.042568154 5.590748361 4.42E-05 4.354655403 1.943453598 ESEPES(ph)PMDVDNSK ddPTM_A459_MK2206_30min_R1 1 ESEPESPMDVDNSK 14 0 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 ESEPES(1)PMDVDNSK 227.92 3.63E-13 3717100 1177.8 1066.8 1040.1 839.86 800.91 913.59 990.04 884.89 815.51 813.25 TRUE FALSE 1077.621925 997.3511261 969.5009099 904.5461627 769.0080587 965.3166763 923.996238 877.1535 900.2851828 914.0015497 1.179015424 1.091191942 1.060721298 0.989654955 0.841364064 1.056143369 1.010935089 0.959684916 0.984993059 1 9.836052801 -5.259946367 1.507191326 0.975646518 1.17409394 0.592645087 0.053940764 0.392409964 1.438659772 0.016740606 0.088286532 5.50E-06 5.259946367 0.198447422 ESEPES(ph)PMDVDNSK ddPTM_A459_MK2206_30min_R2 3 ESEPESPMDVDNSK 14 0 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 ESEPES(1)PMDVDNSK;ESEPES(0.973)PMDVDNS(0.027)K;ESEPES(1)PMDVDNSK 272.09 7.27E-52 24183000 118150 122246 107542 107302 97766 71602 102311 80468 81862 105937 TRUE FALSE 127195.6548 116175.4414 111127.3966 98535.08336 93927.21561 74326.86428 88877.4428 90985.44389 88982.20879 102480.2844 1.241171954 1.133636993 1.084378301 0.961502829 0.916539373 0.725279645 0.867263819 0.88783364 0.868286123 1 16.64498686 -5.649244287 1.254508085 0.861712692 1.216906477 0.784428547 0.066435626 0.226223675 0.677220503 0.022789328 0.069312348 2.24E-06 5.649244287 0.355193785 ESEQES(ph)EEEILAQK ddPTM_A459_MK2206_30min_R1 1 ESEQESEEEILAQK 14 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 ES(0.009)EQES(0.991)EEEILAQK 133.9 0.00068891 7843000 2509.3 2557.8 2420.7 2031.1 2006.1 1855.4 2334.9 1819.9 2866.5 3601.6 TRUE FALSE 2295.870858 2391.286755 2256.389628 2187.535674 1926.192789 1960.451145 2179.143081 1803.988806 3164.482933 4047.793399 0.567190721 0.590763045 0.557436955 0.540426711 0.475862427 0.484325891 0.538353336 0.445672155 0.781779755 1 11.98291994 -8.496930225 3.598636389 0.998479771 0.527198272 0.924589546 0.043932495 0.051382413 1.61340379 0.045960555 0.012119945 3.18E-09 8.496930225 -0.471281499 ESEQES(ph)EEEILAQKK ddPTM_A459_MK2206_30min_R1 2 ESEQESEEEILAQKK 15 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 ESEQES(1)EEEILAQKK;ES(0.001)EQES(0.999)EEEILAQKK 149.47 0.00014609 23547000 5403.3 5149.2 5570.2 4994.4 4637 3916.6 4482.4 4789.2 4577.6 4134.7 TRUE FALSE 4943.720961 4813.986144 5192.110343 5379.069553 4452.298471 4138.354507 4183.387275 4747.328529 5053.457901 4646.937851 1.063866382 1.035948037 1.117318654 1.15755143 0.958114486 0.890555166 0.900246013 1.02160362 1.087481275 1 12.18206463 -6.278685531 24.53885874 0.969320314 1.091237157 0.465195438 0.061336332 626.4521148 891351.1974 0.02115673 0.024045982 5.26E-07 6.278685531 0.121916843 ESEQES(ph)EEEILAQKK ddPTM_A459_MK2206_30min_R2 2 ESEQESEEEILAQKK 15 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 ES(0.042)EQES(0.958)EEEILAQKK;ES(0.005)EQES(0.995)EEEILAQKK 90.755 0.0078229 24710000 75907 91932 83201 89687 107049 66430 96513 77199 69980 101530 TRUE FALSE 81718.49828 87366.79056 85974.87981 82359.28521 102845.7184 68958.0402 83840.72717 87289.17436 76066.73391 98217.08441 0.832019183 0.889527429 0.87535565 0.838543373 1.047126567 0.702098221 0.853626715 0.888737177 0.774475585 1 16.58368638 -6.774904633 24.99983134 0.83744864 0.891730214 0.074507177 0.090783163 648.1010411 1203268.765 0.03055621 0.027095957 1.68E-07 6.774904633 0.054281574 ESGADGAST(ph)SPR ddPTM_A459_MK2206_30min_R2 1 ESGADGASTSPR 12 0 O75528;O75528-2 O75528 TADA3 Transcriptional adapter 3 1 ESGADGAS(0.061)T(0.469)S(0.469)PR 96.067 0.040831 1542200 8750.8 8718 7738.3 11140 10039 12680 12440 9346.8 10171 8561.7 TRUE FALSE 9420.767976 8285.076797 7996.29106 10229.82636 9644.818418 13162.54629 10806.61306 10568.45885 11055.6552 8282.33243 1.137453496 1.000331352 0.965463669 1.235138344 1.164505108 1.589231825 1.304778955 1.27602447 1.334848038 1 13.01582139 -6.033557879 2.196243036 1.31203864 1.033482664 0.334071686 0.14772864 0.31133977 2.995136695 0.045889331 0.06962994 9.26E-07 6.033557879 -0.278555975 ESGADGASTS(ph)PR ddPTM_A459_MK2206_30min_R1 1 ESGADGASTSPR 12 0 O75528;O75528-2 O75528 TADA3 Transcriptional adapter 3 1 ESGADGAST(0.025)S(0.975)PR 163.45 0.00050089 19384000 8674.4 8903.9 8117.3 6981.1 7237.9 6890.6 8769.7 8123.3 2456.3 5801 TRUE FALSE 7936.596729 8324.254492 7566.320292 7518.785532 6949.599116 7280.739817 8184.689314 8052.278845 2711.641175 6519.671675 1.217330738 1.276790444 1.160537013 1.153246038 1.065943112 1.116734121 1.255383664 1.235074287 0.41591683 1 12.6705836 -8.242127727 24.97799631 0.707958391 1.182391776 0.636510147 0.144225543 401.3221942 519078.3957 0.091254314 0.034375855 5.73E-09 8.242127727 0.474433385 ESGADGASTS(ph)PR ddPTM_A459_MK2206_30min_R2 1 ESGADGASTSPR 12 0 O75528;O75528-2 O75528 TADA3 Transcriptional adapter 3 1 ESGADGAS(0.006)T(0.164)S(0.83)PR 104.59 0.0096778 83332000 27158 31484 30443 35690 32728 35446 33959 28419 31224 29932 TRUE FALSE 29237.23736 29920.55034 31457.95443 32774.01283 31442.93427 36794.92237 29500.14251 32133.46088 33939.80708 28955.32129 1.009736244 1.033335118 1.086430854 1.131882202 1.085912118 1.270748199 1.018815927 1.109760122 1.172144033 1 14.82154088 -5.303264552 2.107724966 1.119040718 1.0112344 0.199461581 0.071788607 0.520432331 4.274878565 0.01956768 0.068824776 4.97E-06 5.303264552 -0.107806317 ESGGSGFRS(ph)PHLWK ddPTM_A459_MK2206_30min_R2 1 ESGGSGFRSPHLWK 14 1 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 ES(0.002)GGSGFRS(0.997)PHLWK 68.463 0.027108 3536400 28073 45142 42813 55508 51591 51435 47098 38409 49180 45998 TRUE FALSE 30222.29046 42900.31392 44240.36405 50972.81884 49565.27812 53392.39497 40913.97603 43429.18818 53457.5875 44497.08903 0.679197024 0.964115066 0.994230522 1.145531538 1.11389934 1.199907592 0.919475339 0.976000658 1.201372689 1 15.44142334 -4.516005084 1.39854231 1.075192377 0.275827985 0.630252622 0.090642838 1.565852547 1.72886241 0.026874709 2.105079715 3.05E-05 4.516005084 -0.799364392 ESGNS(ph)QELAR ddPTM_A459_MK2206_30min_R1 2 ESGNSQELAR 10 0 Q86W50 Q86W50 METTL16 Methyltransferase-like protein 16 1 ESGNS(1)QELAR;ES(0.001)GNS(0.999)QELAR 101.38 0.016419 15618300 3241.1 3750.7 3323.9 2992.1 3556.2 3158.4 3444.8 3385.1 2840.6 2813.8 TRUE FALSE 2965.427425 3506.528748 3098.282929 3222.55206 3414.549024 3337.225879 3215.003677 3355.504428 3135.890535 3162.394787 0.937715758 1.108820683 0.979726801 1.019022696 1.079735218 1.055284398 1.016635776 1.061064368 0.99161893 1 11.62680177 -4.727634376 24.62649312 1.035849864 0.937714867 0.35553462 0.039125262 5085.45093 3704419.72 0.009256675 1.811503781 1.87E-05 4.727634376 -0.098134997 ESGNS(ph)QELAR ddPTM_A459_MK2206_30min_R2 1 ESGNSQELAR 10 0 Q86W50 Q86W50 METTL16 Methyltransferase-like protein 16 1 ES(0.022)GNS(0.978)QELAR 89.26 0.031093 13572000 19268 29482 25492 23112 27857 25323 25443 21673 23858 26900 TRUE FALSE 20743.17289 28017.96675 26341.89056 21223.67567 26763.19421 26286.68451 22102.30354 24505.73551 25933.12571 26022.2552 0.797132022 1.07669249 1.012283153 0.815597092 1.028473282 1.01016166 0.84936157 0.941722204 0.996574875 1 14.66745838 ESGT(ph)T(ph)AWQLVNS(ph)SVKR ddPTM_A459_MK2206_30min_R2 1 ESGTTAWQLVNSSVKR 16 1 A0A0A0MTS7;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12;A0A0A0MRA3;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9 A0A0A0MTS7 TTN Titin 3 ES(0.054)GT(0.954)T(0.99)AWQLVNS(0.586)S(0.416)VKR 49.298 0.028226 510750 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 ESGVAGDPWKEET(ph)DTDLEVVLEK ddPTM_A459_MK2206_30min_R1 2 ESGVAGDPWKEETDTDLEVVLEK 23 1 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 ESGVAGDPWKEET(0.972)DT(0.028)DLEVVLEK;ESGVAGDPWKEET(0.5)DT(0.5)DLEVVLEK 99.569 7.29E-05 8450400 1939.24 2477.96 2254.4 2201.72 1569.28 1706.4 1821.49 1847 2099 1840.54 TRUE FALSE 1774.297455 2316.644354 2101.377609 2371.296856 1506.772255 1803.014893 1699.981726 1830.851874 2317.198561 2068.559991 0.857745225 1.119930949 1.015864959 1.146351504 0.728416029 0.871628042 0.821818914 0.88508522 1.120198869 1 11.01441108 -4.461184292 15.1049319 0.958081151 0.000115867 0.053681637 0.133092227 4435725.168 28607015.95 0.034916432 128828185.8 3.46E-05 4.461184292 -0.957965284 ESGVVAVSPEKS(ph)ESPQKEDGLSSQLK ddPTM_A459_MK2206_30min_R2 1 ESGVVAVSPEKSESPQKEDGLSSQLK 26 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 ES(0.001)GVVAVS(0.119)PEKS(0.479)ES(0.392)PQKEDGLS(0.004)S(0.004)QLK 40.086 0.040267 13212000 27567 34521 35482 27673 30732 20561 34399 25997 24693 29549 TRUE FALSE 29677.55072 32806.73734 36664.95217 25412.02738 29525.30726 21343.46326 29882.36998 29394.89716 26840.75251 28584.81855 1.03822771 1.147697939 1.282672203 0.889004327 1.032901686 0.746671287 1.045393027 1.02833947 0.938986282 1 14.80296151 -5.772552331 24.99982006 0.954049729 1.155349166 0.461674665 0.099821074 184.3066242 414618.3062 0.028116252 0.042148307 1.69E-06 5.772552331 0.201299438 ESHS(ph)PFGLDSFNSTAK ddPTM_A459_MK2206_30min_R1 1 ESHSPFGLDSFNSTAK 16 0 Q7LBC6;Q7LBC6-2;Q7LBC6-3 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 ES(0.18)HS(0.82)PFGLDSFNSTAK 127.37 0.00069017 5545500 8506.1 7443.7 8604.4 6737.6 8447.2 7551 8473.3 8313 6863.3 7671.8 TRUE FALSE 7782.611528 6959.113777 8020.357301 7256.531119 8110.730137 7978.531095 7908.061617 8240.320317 7576.764596 8622.240503 0.902620557 0.807112 0.930194107 0.841606206 0.94067547 0.925343139 0.91717015 0.955705227 0.878746608 1 13.07384709 -1.52289253 0.024642095 1.477988293 0.135263301 0.406021006 0.040868481 1846.070643 3.511623808 66.19961295 136.9268747 0.029999048 1.52289253 -1.342724992 ESHS(ph)PFGLDSFNSTAK ddPTM_A459_MK2206_30min_R2 3 ESHSPFGLDSFNSTAK 16 0 Q7LBC6;Q7LBC6-2;Q7LBC6-3 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 ES(0.408)HS(0.592)PFGLDSFNSTAK;ESHS(0.739)PFGLDS(0.261)FNSTAK;ES(0.363)HS(0.637)PFGLDSFNSTAK 141.97 0.00055773 6829100 55993.1 71272.2 55451.7 67467 66169.9 57741 65029.1 51363.8 48615.7 63106.5 TRUE FALSE 60279.97479 67732.92619 57300.432 61954.73028 63571.73725 59938.37422 56490.70106 58077.22502 52844.20571 61047.34007 0.987429996 1.109514782 0.93862291 1.014863714 1.041351469 0.98183433 0.925358926 0.951347347 0.86562667 1 15.89764082 -7.066835346 3.438058725 0.931770166 1.018691124 0.369217335 0.050722284 0.25666444 5.930791855 0.019634567 0.015315684 8.57E-08 7.066835346 0.086920958 ESHT(ph)PVSIQEEIVGDFK ddPTM_A459_MK2206_30min_R1 2 ESHTPVSIQEEIVGDFK 17 0 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;A0A0A0MR81;F5H176 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 ES(0.193)HT(0.804)PVS(0.003)IQEEIVGDFK;ES(0.134)HT(0.863)PVS(0.003)IQEEIVGDFK 150.37 0.00035257 4517200 3457.7 3825.9 3758.1 2959.68 3074.7 3345.5 3234 2712.6 3502.6 3093.6 TRUE FALSE 3163.604458 3576.833215 3503.010643 3187.635066 2952.228188 3534.919319 3018.265761 2688.884024 3866.707804 3476.858523 0.909903131 1.028754317 1.007521767 0.916814718 0.849107943 1.016699211 0.868101403 0.773365958 1.112126875 1 11.76356865 -5.770332605 24.62425963 0.921496775 0.986729195 0.040492868 0.094722043 387.9540563 1074199.744 0.025832964 0.038980431 1.70E-06 5.770332605 0.06523242 ESHT(ph)PVSIQEEIVGDFK ddPTM_A459_MK2206_30min_R2 2 ESHTPVSIQEEIVGDFK 17 0 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;A0A0A0MR81;F5H176 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 ES(0.181)HT(0.767)PVS(0.051)IQEEIVGDFK;ES(0.149)HT(0.849)PVS(0.002)IQEEIVGDFK 152.13 0.00024929 4459400 56624 66676 54784 70091 62019 56333 67120 57215 50185 62407 TRUE FALSE 60959.17698 63364.9668 56610.47122 64364.34109 59583.82244 58476.79179 58307.06337 64693.19695 54550.00059 60370.6647 1.009748315 1.049598627 0.93771489 1.066152599 0.98696648 0.968629252 0.965817813 1.071599878 0.903584561 1 15.88156007 -6.480654019 24.97850623 0.984550387 1.014379744 0.094843187 0.049795491 1333.284008 788719.2692 0.014716245 0.016684714 3.31E-07 6.480654019 0.029829358 ESIESEIRR ddPTM_A459_MK2206_30min_R1 4 ESIESEIRR 9 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ;;; 196.88 0.00098201 119785400 11664.2 10640 12123.3 10647.5 14593.5 11942.8 12919.8 11638.5 7971 7425.9 FALSE TRUE 10672.09854 9947.334066 11300.40417 11467.57229 14012.20999 12618.99102 12057.94372 11536.74582 8799.613975 8345.876555 1.278727102 1.191886077 1.354010462 1.374040488 1.678938084 1.512003075 1.444778585 1.382328836 1.054366658 1 13.02684787 -8.279473649 3.834573987 1.004873561 1.409125703 0.596487445 0.123796783 0.172085304 5.441315849 0.127465007 0.036436554 5.25E-09 8.279473649 0.404252142 ESIESEIRR ddPTM_A459_MK2206_30min_R2 4 ESIESEIRR 9 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ;;; 179.37 0.00098201 56723200 80806 110726 100261 130280 123746 122935 116403 88611 111680 88103.8 FALSE TRUE 86992.56949 105227.5079 103603.6517 119635.7073 118887.1103 127613.3776 101119.1463 100192.7619 121393.7245 85228.98022 1.020692366 1.23464469 1.215591826 1.403697509 1.394914147 1.497300299 1.18644088 1.175571521 1.424324499 1 16.37905645 -4.553229586 1.435218177 1.3075644 0.766209631 0.23626762 0.14144726 2.905718517 3.636714604 0.040050015 2.642138308 2.80E-05 4.553229586 -0.541354768 ESIPSLPQS(ph)PMR ddPTM_A459_MK2206_30min_R2 1 ESIPSLPQSPMR 12 0 Q8NEZ4;Q8NEZ4-3;H7BY37;Q8NEZ4-2;H0Y765 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 ESIPS(0.007)LPQS(0.993)PMR 83.243 0.034803 8553200 62929 148440 110510 120740 140590 202140 113600 94187 131510 69258 TRUE FALSE 67746.89262 141068.6855 114194.3482 110875.1558 135069.7302 209832.5793 98684.18354 106497.5643 142948.5021 66998.11713 1.011176068 2.10556194 1.704441156 1.654899578 2.016022778 3.131917557 1.472939655 1.589560556 2.133619693 1 16.03183293 -6.254889867 22.03795145 1.961329917 1.65987415 0.040535213 0.576654232 350.0531256 1177854.308 0.172811661 0.217023769 5.56E-07 6.254889867 -0.301455767 ESKEEETS(ph)IDVAGKPNEVTK ddPTM_A459_MK2206_30min_R1 1 ESKEEETSIDVAGKPNEVTK 20 2 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 ES(0.004)KEEET(0.422)S(0.574)IDVAGKPNEVTK 93.767 0.0013638 5533600 863.26 1023.6 653.52 776.77 758.26 786.19 1078.9 1497.3 1516.3 1064.8 TRUE FALSE 789.8352038 956.963454 609.1608832 836.59696 728.0568986 830.7033984 1006.92855 1484.209264 1673.924811 1196.715463 0.660002506 0.799658301 0.509027335 0.699077589 0.608379286 0.694152808 0.84141016 1.24023572 1.398765925 1 10.22486446 -7.633343845 2.864989188 1.247805873 0.663040006 0.818397974 0.115618955 0.098926546 1.625845614 0.062478918 0.03187385 2.33E-08 7.633343845 -0.584765867 ESKEEETS(ph)IDVAGKPNEVTK ddPTM_A459_MK2206_30min_R2 1 ESKEEETSIDVAGKPNEVTK 20 2 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 ES(0.005)KEEET(0.222)S(0.773)IDVAGKPNEVTK 113.7 0.0003356 3387200 16050 16657 16340 20009 17818 15499 25282 17225 17697 19175 TRUE FALSE 17278.80034 15829.8376 16884.76744 18374.20069 17118.37579 16088.82531 21962.44303 19476.36664 19236.25307 18549.32132 0.931505797 0.85339174 0.910263354 0.99055919 0.922857257 0.867353852 1.184002512 1.049977318 1.037032716 1 14.17907878 -7.246098673 24.99922037 1.071917919 0.913857502 0.646386602 0.05616115 502.2159185 818412.6003 0.021708441 0.01675408 5.67E-08 7.246098673 -0.158060417 ESLCDS(ph)PHQNLSR ddPTM_A459_MK2206_30min_R1 3 ESLCDSPHQNLSR 13 0 O15042-2;O15042;C9J5L1;E7EW00;E7ET15;U3KPT1;C9JDJ7;H0Y8D9 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 ES(0.234)LCDS(0.734)PHQNLS(0.031)R;ESLCDS(1)PHQNLSR;ES(0.016)LCDS(0.979)PHQNLS(0.005)R 217.39 1.85E-08 23470200 9098.4 9429.3 9528.6 8286.2 8937.3 7431.2 8829.8 8290.9 7662.1 8038.9 TRUE FALSE 8324.533302 8815.450856 8881.82518 8924.40456 8581.308416 7851.948122 8240.780153 8218.413535 8458.602714 9034.819623 0.921383453 0.97571963 0.983066132 0.987778941 0.949804066 0.869076357 0.912113412 0.90963781 0.936222644 1 13.14128008 -6.531935891 24.9899816 0.917876789 0.968763332 0.223544167 0.035245962 235.9325485 650967.102 0.01121802 0.011233765 2.94E-07 6.531935891 0.050886542 ESLCDS(ph)PHQNLSR ddPTM_A459_MK2206_30min_R2 3 ESLCDSPHQNLSR 13 0 O15042-2;O15042;C9J5L1;E7EW00;E7ET15;U3KPT1;C9JDJ7;H0Y8D9 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 ES(0.021)LCDS(0.979)PHQNLSR;ES(0.007)LCDS(0.993)PHQNLSR;ES(0.002)LCDS(0.998)PHQNLSR 220.72 1.14E-08 49185500 100069 117430 94566 103494 98961 107803 126094 87747 89206 121829 TRUE FALSE 107730.3596 111598.597 97718.78324 95038.20914 95075.2939 111905.5187 109537.7063 99215.83418 96964.97663 117853.7297 0.914102251 0.946924609 0.829153082 0.806408158 0.806722826 0.949528869 0.929437758 0.841855701 0.822756962 1 16.84663789 -6.765479803 24.99621019 0.900126945 0.860689928 0.119550701 0.063086282 311.8274815 1929115.471 0.023585212 0.021563546 1.72E-07 6.765479803 -0.039437018 ESLCDS(ph)PHQNLSRPLLENK ddPTM_A459_MK2206_30min_R1 2 ESLCDSPHQNLSRPLLENK 19 1 O15042-2;O15042;C9J5L1;E7EW00;E7ET15;U3KPT1;C9JDJ7;H0Y8D9 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 ES(0.011)LCDS(0.984)PHQNLS(0.005)RPLLENK;ES(0.002)LCDS(0.998)PHQNLSRPLLENK 114.37 0.00027052 22751000 2588.5 2098.19 2038.91 2273.8 2265 1820.03 1949.43 2237.66 1593.01 1219.22 TRUE FALSE 2368.334482 1961.59745 1900.51447 2448.92847 2174.780254 1923.078526 1819.387082 2218.096375 1758.60909 1370.266178 1.728375494 1.43154482 1.386967365 1.787191794 1.587122479 1.403434279 1.327761796 1.618733944 1.283406916 1 10.42024045 -9.7053303 0.32525453 0.848778199 1.58792838 0.575612158 0.14418192 4.917477056 0.667896917 1.037446646 0.152250237 1.97E-10 9.7053303 0.739150181 ESLCDS(ph)PHQNLSRPLLENK ddPTM_A459_MK2206_30min_R2 3 ESLCDSPHQNLSRPLLENK 19 1 O15042-2;O15042;C9J5L1;E7EW00;E7ET15;U3KPT1;C9JDJ7;H0Y8D9 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 ES(0.009)LCDS(0.984)PHQNLS(0.007)RPLLENK;ES(0.009)LCDS(0.972)PHQNLS(0.019)RPLLENK;ES(0.001)LCDS(0.999)PHQNLSRPLLENK 105.53 0.00047294 53907200 42553 58361 45882 56330 59885 65312 64480 41304 58780 48925 TRUE FALSE 45810.8904 55462.8776 47411.68298 51727.65881 57533.614 67797.49393 56013.69855 46702.57462 63892.57815 47328.58126 0.967932889 1.171868586 1.001755846 1.09294759 1.215620931 1.432485237 1.183506817 0.98677318 1.349978733 1 15.53042406 -4.759848071 24.64676484 1.163059397 0.967932612 0.141592566 0.141204546 71.96815554 1114239.566 0.035968997 0.221540345 1.74E-05 4.759848071 -0.195126785 ESLPPAAEPS(ph)PVSK ddPTM_A459_MK2206_30min_R1 2 ESLPPAAEPSPVSK 14 0 Q9NWT1 Q9NWT1 PAK1IP1 p21-activated protein kinase-interacting protein 1 1 ESLPPAAEPS(0.922)PVS(0.078)K;ESLPPAAEPS(0.814)PVS(0.186)K 211.7 3.38E-06 93003000 15016.3 15609.3 14390.3 13127.5 13306.8 12753.9 14380.5 13796.4 13984.3 12692.3 TRUE FALSE 13739.08483 14593.13173 13413.52653 14138.58232 12776.76198 13476.0148 13421.20308 13675.77953 15438.01803 14264.71795 0.963151524 1.023022803 0.9403289 0.99115751 0.895689773 0.944709517 0.940867049 0.95871363 1.082251895 1 13.8001636 -8.240442769 23.24858863 1.041125919 0.956956574 0.456827687 0.036602687 250.5385607 277411.7032 0.024840742 0.009359832 5.75E-09 8.240442769 -0.084169345 ESLPPAAEPS(ph)PVSK ddPTM_A459_MK2206_30min_R2 4 ESLPPAAEPSPVSK 14 0 Q9NWT1 Q9NWT1 PAK1IP1 p21-activated protein kinase-interacting protein 1 1 ESLPPAAEPS(0.986)PVS(0.014)K;ESLPPAAEPS(0.99)PVS(0.01)K;ESLPPAAEPS(0.998)PVS(0.002)K;ESLPPAAEPS(0.995)PVS(0.005)K 182.35 7.59E-05 119951000 375880 402178 386121 417080 431969 355653 462978 334870 347693 420779 TRUE FALSE 404657.6618 382206.4253 398994.0814 383003.2298 415007.7266 369187.6241 402188.4325 378638.6588 377934.7087 407049.0157 0.994125145 0.938969045 0.98021139 0.940926559 1.019552218 0.90698567 0.988058973 0.930204089 0.92847469 1 18.634843 -7.773699267 24.99098078 0.947004555 0.96512046 0.02230293 0.03555422 772.9681351 1575619.163 0.017805296 0.008652565 1.68E-08 7.773699267 0.018115905 ESLPS(ph)EDDSDQR ddPTM_A459_MK2206_30min_R2 1 ESLPSEDDSDQR 12 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 ESLPS(0.511)EDDS(0.489)DQR 87.831 0.027981 3955000 12447 18516 14151 19346 18508 25199 20146 12367 15279 15939 TRUE FALSE 13399.95189 17596.52236 14622.78728 17765.36992 17781.28292 26157.9656 17500.806 13983.40936 16607.9398 15418.91174 0.869059511 1.141229852 0.948367014 1.152180531 1.153212576 1.696485851 1.135022127 0.90689989 1.077114915 1 13.91241332 -4.003903566 0.847085307 1.165960956 0.149876094 0.124254423 0.206681301 17.38253623 3.718116565 0.078458361 22.53849856 9.91E-05 4.003903566 -1.016084862 ESLPVSGEESQLT(ph)PEKSPK ddPTM_A459_MK2206_30min_R2 2 ESLPVSGEESQLTPEKSPK 19 1 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 ESLPVSGEES(0.123)QLT(0.859)PEKS(0.018)PK;ESLPVSGEES(0.173)QLT(0.606)PEKS(0.221)PK 95.767 0.0023482 8882800 41752 40180 38023 37640 46664 29753 51532 36197 36005 52150 TRUE FALSE 44948.56522 38184.71963 39290.66784 34564.6916 44831.73689 30885.27126 44765.7865 40928.07218 39136.64982 50448.34977 0.890981874 0.756907209 0.778829595 0.685150094 0.888666073 0.61221569 0.887358788 0.81128664 0.775776611 1 15.62251946 -10.38792752 0.531895125 1.054861865 0.778945293 0.353229428 0.086049264 18.62040239 3.476583675 1.761217775 0.036931038 4.09E-11 10.38792752 -0.275916572 ESLS(ph)PGK ddPTM_A459_MK2206_30min_R1 1 ESLSPGK 7 0 E7EUA0;Q0ZGT2-2;Q0ZGT2;E7ETM8;Q0ZGT2-4;H7BXY5 E7EUA0 NEXN Nexilin 1 ES(0.01)LS(0.99)PGK 83.647 0.038904 11641000 6403.4 6343.8 6010.3 5325.5 3201.3 3006.4 6213.6 6328.9 1891.6 5731.6 TRUE FALSE 5858.757204 5930.817467 5602.337582 5735.670933 3073.785442 3176.61977 5799.102081 6273.567095 2088.238589 6441.673879 0.909508509 0.920695083 0.869702144 0.8904007 0.47717185 0.493135764 0.900247698 0.973903245 0.324176391 1 12.65321991 -6.056773181 24.55240657 0.692761846 0.898376642 0.183251855 0.209789243 409.7510297 177201.9254 0.062423522 0.080588778 8.77E-07 6.056773181 0.205614797 ESLT(ph)PGREENPSSVLAQER ddPTM_A459_MK2206_30min_R1 3 ESLTPGREENPSSVLAQER 19 1 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;D6RDA9;Q3MSN4 P04150-3 NR3C1 Glucocorticoid receptor 1 ES(0.002)LT(0.996)PGREENPS(0.001)S(0.001)VLAQER;ES(0.086)LT(0.904)PGREENPS(0.003)S(0.007)VLAQER;ES(0.042)LT(0.958)PGREENPSSVLAQER 149.74 0.00031097 14665500 3553.04 3579.09 2783.74 2831.35 3170.56 2815.72 3362.75 3206.55 2858.42 2557.77 TRUE FALSE 3250.83529 3346.09059 2594.787485 3049.421068 3044.269881 2975.143633 3138.427083 3178.515471 3155.562988 2874.645858 1.130864618 1.164000978 0.902645965 1.060798867 1.059006929 1.034960054 1.091761295 1.1057068 1.097722344 1 11.48916852 -7.280271098 23.83078348 1.08260651 1.056512951 0.004207637 0.06993981 2215.276231 2803329.472 0.030213957 0.020405731 5.24E-08 7.280271098 -0.02609356 ESLT(ph)PGREENPSSVLAQER ddPTM_A459_MK2206_30min_R2 3 ESLTPGREENPSSVLAQER 19 1 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;D6RDA9;Q3MSN4 P04150-3 NR3C1 Glucocorticoid receptor 1 ES(0.112)LT(0.887)PGREENPSSVLAQER;ES(0.001)LT(0.999)PGREENPSSVLAQER;ES(0.011)LT(0.989)PGREENPSSVLAQER 166.3 6.91E-08 11090700 30533.3 36450.5 32084.3 34809.2 40727 39123.8 35037.4 22443.5 27992.8 34337.6 TRUE FALSE 32870.95292 34640.42117 33153.97455 31965.17701 39127.85334 40612.68362 30436.94729 25376.94251 30427.56314 33217.16692 0.989577257 1.042846949 0.998097599 0.96230895 1.177940715 1.222641405 0.916301723 0.763970707 0.916019214 1 15.01964141 -7.501602446 24.38378783 0.872024212 1.062515685 0.424390503 0.094260309 509.9909534 584479.7066 0.041900391 0.027905906 3.15E-08 7.501602446 0.190491474 ESLTEAEVATEKEGEDGDQPT(ph)TPPKPLK ddPTM_A459_MK2206_30min_R1 1 ESLTEAEVATEKEGEDGDQPTTPPKPLK 28 2 P18858-3;P18858;M0R0Q7;P18858-2;B4E135 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 ESLTEAEVATEKEGEDGDQPT(0.5)T(0.5)PPKPLK 61.111 0.0045295 27813000 2290.3 2681.4 2185.9 1648.7 2652.5 2936 2655.9 2105.3 2270.6 2387.1 TRUE FALSE 2095.497958 2506.840373 2037.527198 1775.68316 2546.845308 3102.233783 2478.729757 2086.893584 2506.636995 2682.83197 0.781076855 0.934400813 0.759468808 0.661868943 0.94931227 1.156328021 0.923922849 0.777869657 0.934325006 1 11.38954098 -6.36753246 10.44532898 0.954552245 0.793250495 0.385091114 0.106688932 0.589787699 54.53281817 0.036224429 0.041069499 4.29E-07 6.36753246 -0.16130175 ESLTEAEVATEKEGEDGDQPT(ph)TPPKPLK ddPTM_A459_MK2206_30min_R2 1 ESLTEAEVATEKEGEDGDQPTTPPKPLK 28 2 P18858-3;P18858;M0R0Q7;P18858-2;B4E135 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 ESLTEAEVATEKEGEDGDQPT(0.5)T(0.5)PPKPLK 73.11 0.00027154 52762000 174100 158310 161900 149660 174470 94000 180010 150460 104860 186930 TRUE FALSE 187429.2299 150448.5556 167297.6652 137432.2993 167619.4312 97577.23587 156374.4708 170125.6386 113980.5333 180830.4894 1.036491304 0.831986664 0.925162929 0.760006234 0.926942308 0.539606104 0.864757217 0.940801737 0.630317009 1 17.46427842 -1.522888148 0.854099598 0.805981265 80.61035134 0.172739416 0.13798235 1174.89053 3.211889801 0.045414104 182228.8186 0.02999935 1.522888148 79.80437007 ESMEAS(ph)PEAMVK ddPTM_A459_MK2206_30min_R1 1 ESMEASPEAMVK 12 0 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 ES(0.014)MEAS(0.986)PEAMVK 232.37 3.66E-10 18202000 3366.8 3324.6 2812.2 2771.7 3036.5 3310 3411.7 2517.1 2785.3 2621.9 TRUE FALSE 3080.43598 3108.167936 2621.315699 2985.176814 2915.549775 3497.40934 3184.111718 2495.09326 3074.841902 2946.720766 1.045377633 1.054788757 0.889570444 1.013050455 0.989421804 1.186881831 1.080561061 0.846735561 1.043479225 1 11.52489464 -7.714648438 24.99995986 0.958827875 1.035102641 0.137807228 0.084127856 239.6575762 128046.4349 0.041372764 0.023886485 1.93E-08 7.714648438 0.076274767 ESMEAS(ph)PEAMVK ddPTM_A459_MK2206_30min_R2 2 ESMEASPEAMVK 12 0 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 ES(0.001)MEAS(0.999)PEAMVK;ESMEAS(1)PEAMVK 166.62 0.00043869 37889000 84035 100475 90305 109330 98249 106940 120988 93253 85666 93564 TRUE FALSE 90468.78421 95485.5576 93315.72363 100397.3893 94391.2506 111009.6766 105102.1303 105441.4873 93117.07383 90511.01434 0.999533426 1.05496064 1.030987491 1.109228418 1.042870321 1.226476992 1.16120818 1.164957525 1.028792733 1 16.46580574 -5.870435686 1.367632948 1.123436631 1.022898457 0.18507645 0.067548823 0.627738309 2.378076306 0.023340544 0.049224412 1.35E-06 5.870435686 -0.100538174 ESMQMQVEAERR ddPTM_A459_MK2206_30min_R1 1 ESMQMQVEAERR 12 1 A0A087WYB4;Q9UJZ1 A0A087WYB4 STOML2 "Stomatin-like protein 2, mitochondrial" 0 157.03 0.00078216 0 1065.1 925.29 884.61 991.56 1564.5 1433.4 1712 1024.8 1049.1 594.43 FALSE TRUE 974.5076519 865.0534528 824.5651379 1067.930123 1502.182652 1514.557869 1597.795604 1015.840282 1158.157699 668.0724761 1.458685527 1.294849711 1.234245037 1.598524354 2.248532466 2.26705623 2.391650099 1.520554009 1.733580922 1 9.383860812 -6.012750845 5.506039215 1.934191593 1.335486944 0.259456534 0.391278649 0.204883475 20.80648965 0.115405557 0.160635132 9.71E-07 6.012750845 -0.598704649 ESNCYDPER ddPTM_A459_MK2206_30min_R1 1 ESNCYDPER 9 0 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 167.12 0.011928 16901000 5738.6 5406.6 5544.1 4796 5804.4 5381.6 5754.3 5221.9 4997 4800.4 FALSE TRUE 5250.501935 5054.629357 5167.781939 5165.388751 5573.198457 5686.301541 5370.441146 5176.245479 5516.456032 5395.109793 0.973196494 0.936890916 0.957864091 0.957420507 1.033009275 1.053973276 0.995427591 0.959432834 1.022491894 1 12.3974366 -6.24190235 22.07012343 1.010091908 0.955062176 0.535020342 0.024819813 157.9724351 178453.2481 0.008021408 0.010328733 5.73E-07 6.24190235 -0.055029733 ESNLQLT(ph)DFSPSR ddPTM_A459_MK2206_30min_R2 1 ESNLQLTDFSPSR 13 0 Q5BKX5-3;Q5BKX5 Q5BKX5-3 C19orf54 UPF0692 protein C19orf54 1 ESNLQLT(0.837)DFS(0.034)PS(0.129)R 113.65 0.010512 4337600 18309 17508 15272 18621 18661 15102 19774 14227 11707 16706 TRUE FALSE 19710.75112 16638.57818 15781.16086 17099.60473 17928.27538 15676.71719 17177.65005 16086.51775 12725.2537 16160.88459 1.219657935 1.029558629 0.976503531 1.058085938 1.109362255 0.970040786 1.062915211 0.995398344 0.787410716 1 13.98021855 -8.034872072 6.493489557 0.891412649 1.05318038 0.395047329 0.081839839 0.201714073 26.09459773 0.052208653 0.020353238 9.23E-09 8.034872072 0.161767732 ESNYFGLS(ph)PEER ddPTM_A459_MK2206_30min_R1 2 ESNYFGLSPEER 12 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 ESNYFGLS(1)PEER;ESNYFGLS(1)PEER 219.84 3.48E-08 32441000 4864.8 5237.1 4709.9 3993.3 4846.3 4897.8 5688.8 4530.7 4064.9 4292.5 TRUE FALSE 4451.023214 4896.163838 4390.205111 4300.864658 4653.261609 5175.109203 5309.310532 4491.088568 4487.460901 4824.287307 0.922628138 1.014898891 0.910021487 0.891502596 0.964549023 1.072719943 1.100537798 0.930933065 0.930181106 1 12.23610011 -6.531681955 24.89632048 1.009547542 0.937382829 0.254627065 0.058241292 291.8440115 825356.3911 0.020959934 0.020989573 2.94E-07 6.531681955 -0.072164713 ESNYFGLS(ph)PEER ddPTM_A459_MK2206_30min_R2 1 ESNYFGLSPEER 12 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 ESNYFGLS(1)PEER 133.48 0.0017354 12406000 34039 38194 31929 38315 42824 33603 45018 31398 42225 33735 TRUE FALSE 36645.05201 36297.3415 32993.49692 35184.54194 41142.51459 34881.78571 39107.08252 35501.82641 45897.65417 32634.22971 1.122902313 1.112247533 1.011008907 1.078148381 1.260716583 1.068871121 1.198345506 1.087870825 1.406426767 1 14.99409837 -6.187762482 23.6215383 1.171089018 1.078297933 0.138849988 0.108846246 157.9652857 50643.85751 0.030407366 0.039255732 6.49E-07 6.187762482 -0.092791085 ESPES(ph)EGPIYEGLIL ddPTM_A459_MK2206_30min_R1 1 ESPESEGPIYEGLIL 15 0 Q96QK1 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 1 ES(0.08)PES(0.92)EGPIYEGLIL 85.672 0.020477 562670 0 112.92 0 0 0 0 0 0 123.36 0 TRUE FALSE 0 105.5688875 0 0 0 0 0 0 136.1837134 0 0 ESPFSTSAS(ph)PLLSGSQHFDVPPR ddPTM_A459_MK2206_30min_R1 2 ESPFSTSASPLLSGSQHFDVPPR 23 0 O14980 O14980 XPO1 Exportin-1 1 ESPFST(0.003)S(0.091)AS(0.899)PLLS(0.006)GS(0.001)QHFDVPPR;ESPFS(0.002)T(0.011)S(0.053)AS(0.933)PLLSGSQHFDVPPR 149.82 5.68E-08 20543400 3500.7 2505.4 3067.2 2322.13 2996.6 3128.3 3317.3 2548.5 2893.48 2386.47 TRUE FALSE 3202.947082 2342.298005 2859.00701 2500.980855 2877.239077 3305.421643 3096.00897 2526.218733 3194.2676 2682.123921 1.194183109 0.873299696 1.065948888 0.932462828 1.072746511 1.232389606 1.154312426 0.941872489 1.190947061 1 11.38916018 -6.512702309 24.30135115 1.108882536 1.008883832 0.117257767 0.112078406 653.8849675 1561484.004 0.034725159 0.036834729 3.07E-07 6.512702309 -0.099998705 ESPFSTSAS(ph)PLLSGSQHFDVPPR ddPTM_A459_MK2206_30min_R2 2 ESPFSTSASPLLSGSQHFDVPPR 23 0 O14980 O14980 XPO1 Exportin-1 1 ESPFSTS(0.003)AS(0.997)PLLSGSQHFDVPPR;ESPFSTS(0.001)AS(0.999)PLLSGSQHFDVPPR 216.9 1.32E-26 21366100 43848 53881 49634 70852 64491 74383 75700 47545 48599 54982 TRUE FALSE 47205.03659 51205.34789 51288.77279 65063.16496 61958.7593 77213.69719 65760.49907 53759.29475 52826.05317 53187.94184 0.887513879 0.962724748 0.96429324 1.223269085 1.164902366 1.451714327 1.236379841 1.010742151 0.993196039 1 15.69881159 -5.70017858 6.105218115 1.170868565 0.936509495 0.354207635 0.132629393 0.231201138 16.67394511 0.039520833 0.068521376 1.99E-06 5.70017858 -0.23435907 ESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR ddPTM_A459_MK2206_30min_R1 11 ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 40 1 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ES(0.024)PRPLQLPGAEGPAIS(0.976)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR 154.83 2.94E-48 1225664800 10716.02 10797.44 10966.54 9394.04 12395.75 11049.43 11092.83 10368.35 8926.89 8899.43 TRUE FALSE 9804.566227 10094.52469 10222.16182 10117.57059 11902.00103 11675.03918 10352.84755 10277.70061 9854.872161 10001.95858 0.98026463 1.009254799 1.022016012 1.011558937 1.189967039 1.167275298 1.035082026 1.027568804 0.985294239 1 13.28799491 -1.606552917 17.38422656 1.048543563 0.005229351 0 0.07025178 0 0 0.017686043 0 0.0247427 1.606552917 -1.043314212 ESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR ddPTM_A459_MK2206_30min_R2 13 ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 40 1 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 ES(0.006)PRPLQLPGAEGPAIS(0.994)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ES(0.306)PRPLQLPGAEGPAIS(0.694)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ES(0.002)PRPLQLPGAEGPAIS(0.998)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR 136.2 1.13E-43 1245963300 127345.3 151225.3 136266.3 156430.2 143926.8 156248.5 165002.1 137576.9 126257 146744.7 TRUE FALSE 137094.9541 143715.6715 140809.3504 143649.3523 138275.5107 162194.6462 143337.1261 155558.6732 137238.6056 141956.4325 0.96575373 1.01239281 0.991919478 1.011925629 0.97407006 1.142566373 1.009726179 1.095819827 0.966765671 1 17.1150887 ESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGRR ddPTM_A459_MK2206_30min_R1 2 ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGRR 41 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGRR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGRR 64.221 9.43E-08 39642000 1110.55 1212.77 1128.5 1853.43 1756.9 1619.66 1215.52 1487.03 1041.1 944.16 TRUE FALSE 1016.091891 1133.818453 1051.900564 1996.1815 1686.918953 1711.36375 1134.434879 1474.029053 1149.326071 1061.129669 0.957556763 1.068501321 0.991302567 1.881185267 1.589738749 1.612775328 1.069082236 1.389113034 1.083115574 1 10.05138525 -3.470616576 13.34976749 1.292466973 1.219016043 0 0.312919923 0 0 0.075803168 0 0.000338363 3.470616576 -0.07345093 ESQLAHIKDEPPPLS(ph)PAPLTPATPSSLDPFFSR ddPTM_A459_MK2206_30min_R1 2 ESQLAHIKDEPPPLSPAPLTPATPSSLDPFFSR 33 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 ESQLAHIKDEPPPLS(0.946)PAPLT(0.052)PAT(0.001)PSSLDPFFSR;ESQLAHIKDEPPPLS(0.875)PAPLT(0.115)PAT(0.007)PS(0.001)S(0.001)LDPFFSR 74.429 5.65E-06 120480000 5983.3 4501.1 4872 4561.3 6431.8 5115 4626.6 5430.3 3014.09 1956.75 TRUE FALSE 5474.388915 4208.077572 4541.302214 4912.612116 6175.607786 5404.60688 4317.967956 5382.82346 3327.415442 2199.166963 2.48930118 1.913487081 2.065010202 2.233851363 2.808157767 2.457570058 1.963456176 2.447664753 1.51303448 1 11.10274142 -8.458201257 3.246969432 1.005304893 2.285671842 0.731644815 0.260445717 0.118998668 2.589600685 0.264840711 0.070457402 3.48E-09 8.458201257 1.280366949 ESQLAHIKDEPPPLS(ph)PAPLTPATPSSLDPFFSR ddPTM_A459_MK2206_30min_R2 1 ESQLAHIKDEPPPLSPAPLTPATPSSLDPFFSR 33 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 ES(0.002)QLAHIKDEPPPLS(0.617)PAPLT(0.124)PAT(0.16)PS(0.041)S(0.041)LDPFFS(0.016)R 49.287 0.0048088 21885000 17748 50819 33645 44737 44961 42369 38126 27036 42494 27736 TRUE FALSE 19106.80053 48295.40236 34766.70751 41081.84399 43195.60523 43981.38198 33120.0104 30569.69803 46190.05131 26830.97659 0.712117222 1.79998675 1.295767502 1.531134875 1.609915505 1.639201683 1.234394517 1.139343472 1.721519571 1 14.71161195 -10.56461209 4.99425961 0.999993124 1.420584929 0.134620305 0.310102814 2.24E-05 4.31E-06 0.283356153 0.068722837 2.73E-11 10.56461209 0.420591805 ESQLAHIKDEPPPLSPAPLT(ph)PATPSSLDPFFSR ddPTM_A459_MK2206_30min_R2 1 ESQLAHIKDEPPPLSPAPLTPATPSSLDPFFSR 33 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 ESQLAHIKDEPPPLS(0.469)PAPLT(0.513)PAT(0.012)PS(0.004)S(0.002)LDPFFSR 62.519 0.00022069 22437000 14353 35433 21404 31499 47698 38576 32265 21640 32182 17527 TRUE FALSE 15451.87672 33673.44874 22117.59868 28925.43094 45825.13686 40044.03671 28028.56674 24468.4223 34981.13219 16955.09543 0.911341183 1.986037112 1.304480932 1.70600225 2.702735414 2.361770058 1.653105809 1.443130911 2.063163392 1 14.04943128 -5.999134035 24.92231797 1.933566395 1.466841363 0.135363264 0.508626744 57.7372913 1661515.624 0.145548816 0.213807449 1.00E-06 5.999134035 -0.466725032 ESQMTPSHGGS(ph)PVGPPQLPIMSSLR ddPTM_A459_MK2206_30min_R2 3 ESQMTPSHGGSPVGPPQLPIMSSLR 25 0 A0A5F9ZH11;P55201-3;P55201;P55201-2 A0A5F9ZH11 BRPF1 Peregrin 1 ES(0.001)QMT(0.001)PS(0.011)HGGS(0.986)PVGPPQLPIMSSLR;ES(0.006)QMT(0.022)PS(0.019)HGGS(0.953)PVGPPQLPIMSSLR;ESQMTPSHGGS(1)PVGPPQLPIMSSLR 101.59 0.00015161 6589100 19727.1 25189 20343.7 26811 24493 27383.5 27940.5 24011.8 24884.1 27691.5 TRUE FALSE 21237.42194 23938.15089 21021.9488 24620.45554 23531.28175 28425.59828 24271.87879 27150.2247 27048.47404 26787.92862 0.792798213 0.893617092 0.784754547 0.919087694 0.878428567 1.061134613 0.906075237 1.013524602 1.009726225 1 14.70929541 -6.354966433 1.46018368 0.993359907 0.832907048 0.637438228 0.053808213 0.254660748 1.093289417 0.019645138 0.025052426 4.42E-07 6.354966433 -0.16045286 ESRPGLVTVTSSQS(ph)TPAK ddPTM_A459_MK2206_30min_R2 1 ESRPGLVTVTSSQSTPAK 18 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 ESRPGLVT(0.002)VT(0.002)S(0.055)S(0.042)QS(0.45)T(0.45)PAK 71.929 0.011431 8256800 34832 27349 33617 30633 23728 24502 33628 28617 24783 38069 TRUE FALSE 37498.7647 25990.88843 34737.774 28130.18591 22796.3195 25434.44078 29212.60321 32357.34016 26938.58054 36826.81165 1.0182463 0.705759941 0.943274002 0.763850701 0.619014204 0.69065009 0.793242801 0.878635394 0.731493695 1 15.16846888 -4.74940359 24.75550384 0.783325931 1.018246905 0.264805892 0.112420106 672.9561582 1384055.794 0.027853417 0.453475124 1.78E-05 4.74940359 0.234920974 ESRPGLVTVTSSQS(ph)TPAKAPR ddPTM_A459_MK2206_30min_R2 1 ESRPGLVTVTSSQSTPAKAPR 21 2 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 ESRPGLVT(0.001)VT(0.004)S(0.003)S(0.01)QS(0.491)T(0.491)PAKAPR 49.708 0.025702 15684000 20333 35176 28226 20920 28119 22218 31204 20588 24184 29417 TRUE FALSE 21889.71011 33429.21099 29167.04075 19210.76908 27014.90677 23063.52156 27106.87732 23278.92229 26287.48061 28457.1257 0.769217185 1.174721978 1.024946829 0.675077634 0.949319586 0.810465604 0.952551484 0.818034911 0.923757406 1 14.79650233 ESRPGLVTVTSSQST(ph)PAK ddPTM_A459_MK2206_30min_R1 1 ESRPGLVTVTSSQSTPAK 18 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 ESRPGLVTVTSSQS(0.008)T(0.992)PAK 105.46 0.0023947 5243600 2473 2538.3 2318.2 1763.3 1571.5 1894.2 2688.6 2372 2427.2 3125.1 TRUE FALSE 2262.658364 2373.056209 2160.847043 1899.109672 1508.903827 2001.447967 2509.2484 2351.261854 2679.516126 3512.260981 0.644217037 0.675649168 0.615229635 0.540708587 0.429610395 0.569846027 0.714425384 0.669443947 0.76290348 1 11.77818433 -8.580806939 0.86915704 0.997660161 0.583785925 0.760190766 0.070477773 0.37641707 0.623892156 0.077514743 0.027203509 2.63E-09 8.580806939 -0.413874236 ESRS(ph)PQQSAALPR ddPTM_A459_MK2206_30min_R1 2 ESRSPQQSAALPR 13 1 E5RJN3;A0A0A6YYG7;Q6IBW4-2;Q6IBW4;Q6IBW4-4 E5RJN3 NCAPH2 Condensin-2 complex subunit H2 1 ES(0.001)RS(0.998)PQQS(0.001)AALPR;ES(0.009)RS(0.99)PQQS(0.001)AALPR 134.02 0.0059981 17525300 2941.6 2445.4 2491.06 2621.3 3113.6 2737.3 2564.5 2703.1 1737.55 1730.02 TRUE FALSE 2691.401473 2286.204016 2321.973788 2823.19298 2989.578719 2892.28356 2393.426884 2679.467082 1918.17454 1944.347939 1.38421803 1.175820423 1.194217219 1.451999883 1.537573939 1.487533945 1.23096635 1.378080038 0.986538727 1 10.9250707 -8.263204069 24.67404283 0.993269296 1.35331138 0.607742926 0.116253785 98.96322397 1383639.997 0.105890562 0.032819643 5.46E-09 8.263204069 0.360042085 ESS(ph)NPSDRWR ddPTM_A459_MK2206_30min_R1 2 ESSNPSDRWR 10 1 Q9Y388 Q9Y388 RBMX2 "RNA-binding motif protein, X-linked 2" 1 ES(0.001)S(0.989)NPS(0.01)DRWR;ESS(1)NPSDRWR 149.49 0.0035424 19517900 8498.9 8355.1 9668.6 9678.2 11815.9 8680.4 9002.6 10130.7 7155.5 4332.5 TRUE FALSE 7776.023925 7811.181471 9012.32237 10423.61664 11345.24768 9171.876747 8402.05298 10042.12836 7899.339831 4869.242809 1.59696779 1.604188121 1.850867316 2.140705865 2.329981915 1.883635117 1.72553584 2.062359334 1.622293268 1 12.24948173 -8.605064203 4.156296066 1.000180939 1.902417069 0.607232322 0.219680058 0.301067494 12.91453936 0.235435935 0.061578817 2.48E-09 8.605064203 0.902236129 ESS(ph)NPSDRWR ddPTM_A459_MK2206_30min_R2 1 ESSNPSDRWR 10 1 Q9Y388 Q9Y388 RBMX2 "RNA-binding motif protein, X-linked 2" 1 ES(0.005)S(0.995)NPSDRWR 118.77 0.019089 0 21605 33660 30396 33487 39804 35266 33264 23279 31359 30896 TRUE FALSE 23259.09541 31988.49335 31409.38747 30751.00498 38241.09496 36608.07234 28896.39684 26321.64523 34086.54914 29887.86605 0.77821198 1.070283616 1.050907663 1.028879242 1.279485625 1.22484731 0.966827033 0.880679978 1.140481193 1 14.86727227 -4.761331105 7.858484562 1.073960612 0.774256041 0.37967715 0.112383858 0.112239482 57.54556868 0.030345586 0.178626563 1.73E-05 4.761331105 -0.299704571 ESS(ph)PEKEAEEGCPEK ddPTM_A459_MK2206_30min_R1 2 ESSPEKEAEEGCPEK 15 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ES(0.086)S(0.914)PEKEAEEGCPEK;ES(0.038)S(0.962)PEKEAEEGCPEK 91.518 0.0079477 46160000 6823.5 8637.6 9458.5 6403.7 4513.7 4901.5 6802.3 6123.9 10186.2 12307.6 TRUE FALSE 6243.125493 8075.29067 8816.483373 6896.914084 4333.909771 5179.018694 6348.530978 6070.359388 11245.09194 13832.35841 0.451342086 0.583797096 0.637381068 0.498607243 0.313316764 0.374413281 0.458962296 0.438852089 0.812955507 1 13.75575954 -8.421160559 3.160728993 0.995577726 0.470740607 0.801969956 0.088979377 0.111003969 2.102578617 0.098096981 0.026244452 3.79E-09 8.421160559 -0.524837119 down ESS(ph)PEKEAEEGCPEK ddPTM_A459_MK2206_30min_R2 2 ESSPEKEAEEGCPEK 15 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ES(0.109)S(0.891)PEKEAEEGCPEK;ES(0.304)S(0.696)PEKEAEEGCPEK 178.85 9.42E-05 67495000 154055 94842 124607 98021 87014 62235 129625 114531 70285 132401 TRUE FALSE 165849.5692 90132.28419 128761.3352 90012.37075 83597.39315 64603.39654 112605.0818 129500.5949 76398.26225 128080.7662 1.294882707 0.703714436 1.005313592 0.702778203 0.652692794 0.504395769 0.879172456 1.011085417 0.59648505 1 16.96669432 -5.758703432 24.94217172 0.753632304 0.971544703 0.215163535 0.204877867 117.846856 1074319.237 0.056237342 0.092074185 1.74E-06 5.758703432 0.217912399 ESS(ph)PEKEAEEGCPEKESEEGCPK ddPTM_A459_MK2206_30min_R1 2 ESSPEKEAEEGCPEKESEEGCPK 23 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ES(0.058)S(0.942)PEKEAEEGCPEKESEEGCPK;ES(0.225)S(0.775)PEKEAEEGCPEKESEEGCPK 88.829 0.00022963 129657000 2501.46 2954.39 3699.54 3635.61 1229.11 1266.16 1857.82 2389.37 3155.22 2421.16 TRUE FALSE 2288.697691 2762.058674 3448.425532 3915.625312 1180.151946 1337.848885 1733.888218 2368.47999 3483.21641 2721.11158 0.841089248 1.015047929 1.267285604 1.438980063 0.433702151 0.491655283 0.6371985 0.870408993 1.280071143 1 11.4099804 -6.259179982 24.99653226 0.756918555 1.140681563 0.285418653 0.273015333 273.8609512 3029819.753 0.088883032 0.1092388 5.51E-07 6.259179982 0.383763008 ESS(ph)PEKEAEEGCPEKESEEGCPK ddPTM_A459_MK2206_30min_R2 4 ESSPEKEAEEGCPEKESEEGCPK 23 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ES(0.432)S(0.567)PEKEAEEGCPEKES(0.001)EEGCPK;ES(0.015)S(0.985)PEKEAEEGCPEKESEEGCPK;ES(0.063)S(0.937)PEKEAEEGCPEKESEEGCPK;ES(0.192)S(0.808)PEKEAEEGCPEKESEEGCPK 84.125 0.00012126 264982000 284085 261604 286077 228988 219187 110334.5 308371 222726 157086 269994 TRUE FALSE 305834.766 248613.1258 295614.6644 210278.9479 210580.6171 114533.3567 267881.5173 251837.0529 170749.0563 261184.1179 1.170954683 0.951869232 1.131824809 0.805098524 0.80625353 0.438515778 1.025642445 0.964212736 0.653749767 1 17.99470765 -5.769567705 24.681858 0.804793403 1.071581547 0.341070749 0.172367479 174.835316 530893.2094 0.048953596 0.074078088 1.70E-06 5.769567705 0.266788144 ESS(ph)PFLSPLEASR ddPTM_A459_MK2206_30min_R1 1 ESSPFLSPLEASR 13 0 Q9UP95-3;Q9UP95-5;Q9UP95-2;Q9UP95-6;Q9UP95;Q9UP95-4 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 ES(0.155)S(0.844)PFLS(0.001)PLEASR 147.7 0.00056637 4758300 1592.3 1711.5 1530 1330.9 1925.5 1644.2 1789.2 1738.6 1805.4 1519.9 TRUE FALSE 1456.866523 1600.081039 1426.147863 1433.406149 1848.803258 1737.293183 1669.845733 1723.399603 1993.077791 1708.196687 0.852868136 0.936707729 0.834885042 0.839134135 1.08231287 1.017033458 0.977548865 1.00889998 1.166773011 1 10.73825839 -6.258426437 24.99991748 1.038059345 0.868741273 0.700356462 0.056411169 160.329761 1330337.004 0.017237956 0.021306276 5.52E-07 6.258426437 -0.169318072 ESS(ph)PFLSPLEASR ddPTM_A459_MK2206_30min_R2 1 ESSPFLSPLEASR 13 0 Q9UP95-3;Q9UP95-5;Q9UP95-2;Q9UP95-6;Q9UP95;Q9UP95-4 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 ES(0.002)S(0.998)PFLSPLEASR 111.72 0.0051562 1463600 19255 23232 19208 20710 24091 21861 25079 19097 21037 23814 TRUE FALSE 20729.1776 22078.33266 19848.38513 19017.92675 23145.06629 22692.93567 21786.09717 21593.04347 22866.76023 23036.95113 0.899822962 0.958387789 0.861589063 0.825540092 1.004693119 0.985066797 0.945702279 0.937322103 0.992612265 1 14.49166217 -6.275814744 24.99253365 0.973214044 0.889714037 0.586032883 0.037413789 662.2430697 1151351.576 0.012480741 0.014216355 5.30E-07 6.275814744 -0.083500007 ESS(ph)PIPS(ph)PTSDRK ddPTM_A459_MK2206_30min_R1 3 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 2 ES(0.067)S(0.933)PIPS(0.646)PT(0.216)S(0.138)DRK;ES(0.082)S(0.918)PIPS(0.867)PT(0.076)S(0.056)DRK;ES(0.08)S(0.92)PIPS(0.94)PT(0.034)S(0.025)DRK 144.51 0.0022377 9543400 6317.7 6932.3 7634.6 6309.1 5540.2 5710.9 6974.2 6436 7779.9 7252.5 TRUE FALSE 5780.346439 6481.00601 7116.384623 6795.027975 5319.522102 6034.246223 6508.963843 6379.730731 8588.648446 8150.994454 0.709158431 0.795118442 0.873069496 0.833644044 0.652622466 0.740307978 0.798548432 0.782693543 1.053693325 1 12.99276037 -8.256503252 24.31035861 1.026846685 0.774959967 0.740764049 0.060025365 135.9222404 669427.9252 0.046999158 0.01645919 5.54E-09 8.256503252 -0.251886718 ESS(ph)PIPS(ph)PTSDRK ddPTM_A459_MK2206_30min_R2 2 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 2 ES(0.052)S(0.948)PIPS(0.94)PT(0.052)S(0.008)DRK;ES(0.298)S(0.702)PIPS(0.779)PT(0.135)S(0.086)DRK 187.63 0.0004785 41018000 193011 185301 195024 172969 188576 151490 208112 174946 163945 208794 TRUE FALSE 207788.0706 176099.2218 201526.0028 158836.8794 181171.5587 157255.0581 180786.6444 197812.0429 178204.6398 201981.0689 1.028750227 0.871860035 0.997746987 0.786394885 0.896972967 0.778563352 0.895067272 0.979359323 0.882283873 1 17.62386055 -10.41761114 9.565039915 0.999996593 0.898734166 0.12273993 0.07828068 0 0 0.074928244 0.018172768 3.82E-11 10.41761114 -0.101262427 ESS(ph)PIPSPT(ph)SDR ddPTM_A459_MK2206_30min_R2 1 ESSPIPSPTSDR 12 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 2 ES(0.013)S(0.987)PIPS(0.113)PT(0.691)S(0.196)DR 236.05 1.99E-09 20709000 69533 66130 68790 68746 66629 64268 72767 66196 57506 74349 TRUE FALSE 74856.49994 62846.08036 71083.42427 63129.23189 64012.81068 66713.76377 63212.60549 74848.04448 62507.76793 71922.99822 1.0407867 0.873796726 0.988326766 0.877733596 0.890018662 0.927572062 0.878892803 1.040669137 0.869092912 1 16.13416554 -7.730848534 24.99984387 0.966161148 0.922647324 0.089104307 0.064650168 479.6844757 392013.9803 0.028468487 0.016433857 1.86E-08 7.730848534 -0.043513824 ESS(ph)PIPSPTS(ph)DRK ddPTM_A459_MK2206_30min_R1 1 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 2 ES(0.383)S(0.617)PIPS(0.376)PT(0.358)S(0.266)DRK 111.12 0.022487 0 1582 1224.9 1497.9 1008.9 955.18 1026.3 1409.9 1246.3 1580.6 1522.1 TRUE FALSE 1447.442593 1145.158787 1396.226721 1086.605653 917.133158 1084.408219 1315.848144 1235.40373 1744.909026 1710.669239 0.84612651 0.669421511 0.816187425 0.635193308 0.536125358 0.633908762 0.769200798 0.722175685 1.020015434 1 10.74034512 -8.237281709 4.63463389 1.015564318 0.696327878 0.661816744 0.087590942 0.11638186 6.447683159 0.074548478 0.023906467 5.79E-09 8.237281709 -0.31923644 ESS(ph)PIPSPTSDR ddPTM_A459_MK2206_30min_R1 2 ESSPIPSPTSDR 12 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 ES(0.184)S(0.816)PIPSPTSDR;ES(0.013)S(0.987)PIPSPTSDR 160.22 0.0003192 3952100 5623.7 5584.6 5968.9 5482.1 5883.1 4920.5 5949.5 4972.3 5792.7 6244.9 TRUE FALSE 5145.374784 5221.041525 5563.747698 5904.332292 5648.763669 5199.094458 5552.61971 4928.827705 6394.871894 7018.565359 0.733109193 0.743890134 0.792718656 0.841244897 0.804831669 0.740763132 0.791133149 0.702255725 0.911136617 1 12.77696045 -8.475453983 4.521598329 0.999240391 0.772727897 0.797567702 0.038839742 0.079383471 3.577815345 0.039313034 0.010261566 3.35E-09 8.475453983 -0.226512495 ESS(ph)PIPSPTSDRK ddPTM_A459_MK2206_30min_R1 2 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 ES(0.004)S(0.996)PIPSPTSDRK;ES(0.049)S(0.945)PIPS(0.003)PT(0.003)S(0.001)DRK 130.69 0.0028729 14325300 6191.6 6889.6 6847.8 6157.2 6059.4 5914.9 6510.5 5950 6801.9 6727.5 TRUE FALSE 5664.971907 6441.085788 6382.990415 6631.428611 5818.041267 6249.796526 6076.196424 5897.979777 7508.981846 7560.95349 0.749240412 0.851888032 0.844204428 0.877062479 0.769485128 0.82658841 0.80362833 0.780057672 0.993126311 1 12.88435246 -8.269199874 24.79008946 0.996563207 0.815977382 0.793873928 0.037432643 248.4417098 793609.253 0.033851208 0.00939682 5.38E-09 8.269199874 -0.180585825 ESS(ph)PIPSPTSDRK ddPTM_A459_MK2206_30min_R2 2 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 ES(0.191)S(0.795)PIPS(0.002)PT(0.009)S(0.002)DRK;ES(0.094)S(0.906)PIPSPTSDRK 104.55 0.0039038 16555100 63616 73544 70704 74680 73223 59469 78658 62242 69320 75803 TRUE FALSE 68486.48987 69891.9119 73061.23607 68578.40511 70347.8971 61732.13447 68330.11011 70377.24311 75349.3283 73329.55432 0.933954809 0.953120642 0.996340926 0.935208263 0.959338943 0.841845216 0.931822248 0.959739136 1.027543792 1 16.16210715 -8.098879058 3.815359549 1.012868399 0.936546375 0.404793725 0.037164201 0.261488377 6.643836893 0.030114084 0.010437868 7.96E-09 8.098879058 -0.076322024 ESS(ph)PLPK ddPTM_A459_MK2206_30min_R1 2 ESSPLPK 7 0 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 ES(0.014)S(0.986)PLPK;ES(0.019)S(0.981)PLPK 111.95 0.014773 19215900 25091 28279 26146 19078.9 21179 20382.5 27465 22343 22153 30017 TRUE FALSE 22956.87869 26438.03196 24371.28237 20548.36018 20335.39558 21536.53954 25632.85996 22147.65751 24455.88363 33735.73258 0.680491483 0.783680387 0.722417464 0.609097791 0.60278506 0.638389562 0.759813349 0.656504419 0.724925228 1 15.04198987 -8.723549061 4.046089439 0.999997196 0.682733809 0.736752149 0.056744066 1.243306652 24.63021077 0.060090735 0.015727605 1.89E-09 8.723549061 -0.317263387 ESS(ph)PLPK ddPTM_A459_MK2206_30min_R2 2 ESSPLPK 7 0 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 ES(0.019)S(0.981)PLPK;ES(0.12)S(0.88)PLPK 101.72 0.019741 52967000 437890 408300 405400 386680 351110 280320 474830 381970 311400 448080 TRUE FALSE 471415.1951 388024.4157 418915.8337 355087.0071 337323.6572 290987.774 412484.2506 431894.7905 338485.0091 433459.1863 1.087565358 0.895180972 0.966448161 0.819193636 0.778213193 0.671315278 0.951610356 0.996390904 0.780892457 1 18.72553663 -3.825205631 1.060380421 0.85678834 2.332152622 0.282259855 0.103460663 15.29259612 3.0408023 0.033660498 41.04949486 0.000149553 3.825205631 1.475364282 ESS(ph)PLSSR ddPTM_A459_MK2206_30min_R1 1 ESSPLSSR 8 0 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 ES(0.172)S(0.828)PLSSR 109.44 0.01245 10787000 3514.9 3292 3343.5 2499.5 2972.2 2645.1 3047.3 2826 1887.5 3223.9 TRUE FALSE 3215.939298 3077.690202 3116.552536 2692.011923 2853.81098 2794.863276 2844.020177 2801.29258 2083.712379 3623.301071 0.887571646 0.849416083 0.860141753 0.742972188 0.787627339 0.771358278 0.784925161 0.773132711 0.575086734 1 11.82308897 -5.750031702 23.2366455 0.767597952 0.86408057 0.147902751 0.096543403 160.3921632 326699.3571 0.024794963 0.042381117 1.78E-06 5.750031702 0.096482619 ESS(ph)PLSSR ddPTM_A459_MK2206_30min_R2 4 ESSPLSSR 8 0 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 ES(0.039)S(0.961)PLSSR;ES(0.373)S(0.627)PLSSR;ES(0.042)S(0.958)PLSSR;ES(0.062)S(0.938)PLSSR 162.64 0.00036287 47912100 261047 256217 216181 268389 257243 264912 297684 221865 210713 272468 TRUE FALSE 281032.959 243493.6364 223388.3666 246460.7602 247142.3473 274993.4118 258597.7332 250863.5173 229040.4359 263577.3915 1.066225587 0.923803195 0.847524765 0.935060321 0.937646229 1.043311834 0.981107415 0.95176417 0.868968444 1 18.0078671 -4.756103259 24.98045794 0.94262418 1.066225783 0.312784467 0.05468069 226.9586925 1062366.608 0.01456648 0.121497609 1.75E-05 4.756103259 0.123601603 ESS(ph)PLYS(ph)PTFSDSTSAVK ddPTM_A459_MK2206_30min_R1 8 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 ES(0.101)S(0.899)PLY(0.004)S(0.747)PT(0.082)FS(0.109)DS(0.022)T(0.029)S(0.006)AVK;ES(0.062)S(0.938)PLYS(0.425)PT(0.179)FS(0.275)DS(0.118)T(0.002)SAVK;ES(0.477)S(0.523)PLYS(0.935)PT(0.051)FS(0.01)DS(0.002)T(0.002)SAVK;ES(0.008)S(0.992)PLYS(0.938)PT(0.03)FS(0.03)DS(0.002)TSAVK;ES(0.116)S(0.883)PLY(0.003)S(0.905)PT(0.044)FS(0.01)DS(0.031)T(0.007)S(0.002)AVK;ES(0.006)S(0.994)PLYS(0.996)PT(0.001)FS(0.002)DSTSAVK;ES(0.1)S(0.9)PLYS(0.855)PT(0.068)FS(0.049)DS(0.023)T(0.003)SAVK;ES(0.007)S(0.993)PLYS(0.962)PT(0.013)FS(0.022)DS(0.002)TSAVK 248.75 1.34E-31 162924000 17428.25 16791.03 16289.6 13990.9 15609.09 13345.86 15716.97 15206.9 13994.45 13705.33 TRUE FALSE 15945.88582 15697.9309 15183.90734 15068.48154 14987.34689 14101.49106 14668.51961 15073.94768 15449.22316 15403.24975 1.035228674 1.019131102 0.985759991 0.978266391 0.972999019 0.915488049 0.952300316 0.97862126 1.002984656 1 13.91094714 -5.258619824 1.408078877 0.966629182 1.04059636 0.469621943 0.02344037 0.535054787 1.657575225 0.007689612 0.043543968 5.51E-06 5.258619824 0.073967178 ESS(ph)PLYS(ph)PTFSDSTSAVK ddPTM_A459_MK2206_30min_R2 6 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 ES(0.142)S(0.858)PLYS(0.989)PT(0.004)FS(0.005)DS(0.001)TSAVK;ES(0.064)S(0.936)PLY(0.001)S(0.954)PT(0.018)FS(0.027)DSTSAVK;ES(0.077)S(0.923)PLYS(0.9)PT(0.05)FS(0.05)DSTSAVK;ES(0.073)S(0.927)PLYS(0.793)PT(0.173)FS(0.03)DS(0.004)T(0.001)SAVK;ES(0.065)S(0.935)PLYS(0.846)PT(0.06)FS(0.091)DS(0.003)TSAVK;ES(0.085)S(0.914)PLY(0.008)S(0.931)PT(0.049)FS(0.011)DSTSAVK 216.34 2.58E-38 89163900 770074.9 839120 780031.6 837667 835245 683908.7 904224 684993.2 719706.4 861785 TRUE FALSE 829032.4264 797450.521 806037.4642 769226.9265 802449.0845 709935.3248 785498.3026 774524.1632 782305.1617 833665.026 0.994443092 0.956559884 0.966860117 0.922705046 0.962555774 0.851583433 0.942222929 0.929059201 0.938392684 1 19.66910829 -5.177614891 1.09446692 0.929772807 0.997095548 0.176452498 0.036183727 1.499918962 2.302150797 0.01165241 0.100198174 6.64E-06 5.177614891 0.06732274 ESS(ph)PLYSPT(ph)FSDSTSAVK ddPTM_A459_MK2206_30min_R1 1 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 ES(0.012)S(0.988)PLYS(0.166)PT(0.417)FS(0.417)DSTSAVK 226.08 2.22E-16 5479400 3278.9 2746.8 2673.1 2531.1 2638.4 2752.7 2964 2744.4 2306.1 2584.1 TRUE FALSE 3000.012337 2567.982821 2491.65742 2726.045761 2533.306941 2908.555495 2766.276968 2720.406 2545.827347 2904.237817 1.032977506 0.884219194 0.857938494 0.938644124 0.872279442 1.001486682 0.952496711 0.936702216 0.876590523 1 11.50394388 -6.750472593 24.9992683 0.949439216 0.913276574 0.090792591 0.055949152 575.3524699 1311538.308 0.018523152 0.018354953 1.78E-07 6.750472593 -0.036162641 ESS(ph)PLYSPTFS(ph)DSTSAVK ddPTM_A459_MK2206_30min_R1 1 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 ES(0.179)S(0.821)PLYS(0.389)PT(0.083)FS(0.468)DS(0.05)T(0.009)S(0.001)AVK 235.79 8.83E-19 154960000 25597 26680 25932 22173 23199 21340 22608 24407 22209 21547 TRUE FALSE 23419.84073 24943.12715 24171.80809 23880.7683 22274.93471 22548.25236 21099.86157 24193.61217 24517.70503 24216.40503 0.967106418 1.030009496 0.9981584 0.986140109 0.919828301 0.931114768 0.871304454 0.999058784 1.012441979 1 14.56369709 -4.397938942 20.54816045 0.969026144 0.258404573 0 0.046919131 69976.24218 2331132.33 0.012446064 1871136.463 4.00E-05 4.397938942 -0.710621571 ESS(ph)PLYSPTFS(ph)DSTSAVK ddPTM_A459_MK2206_30min_R2 1 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 ES(0.013)S(0.987)PLYS(0.149)PT(0.192)FS(0.503)DS(0.119)T(0.032)S(0.005)AVK 218.64 5.10E-13 11574000 92044 103930 93751 113690 107750 80308 111690 83217 90871 110770 TRUE FALSE 99090.95941 98768.98733 96876.61155 104401.1633 103519.1936 83364.17721 97024.96884 94093.74763 98774.79532 107155.584 0.924739111 0.921734395 0.904074318 0.974295127 0.966064388 0.777973243 0.905458822 0.878104007 0.921788596 1 16.70934751 ESS(ph)PLYSPTFSDSTSAVK ddPTM_A459_MK2206_30min_R1 13 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.003)S(0.997)PLYSPTFSDSTSAVK;ES(0.006)S(0.994)PLYSPTFSDSTSAVK;ES(0.002)S(0.998)PLYSPTFSDSTSAVK;ES(0.006)S(0.994)PLYSPTFSDSTSAVK;ES(0.063)S(0.937)PLYSPTFSDSTSAVK;ES(0.09)S(0.91)PLYSPTFSDSTSAVK;ES(0.008)S(0.992)PLYSPTFSDSTSAVK;ES(0.062)S(0.938)PLYSPTFSDSTSAVK;ES(0.315)S(0.679)PLYS(0.005)PT(0.002)FSDSTSAVK;ES(0.137)S(0.838)PLY(0.003)S(0.021)PTFSDSTSAVK;ES(0.005)S(0.995)PLYSPTFSDSTSAVK;ES(0.007)S(0.993)PLYSPTFSDSTSAVK;ES(0.022)S(0.978)PLYSPTFSDSTSAVK 309.15 2.11E-111 4858196500 41246.44 47121.65 45206.47 41949.49 39988.39 37799.33 41693.57 42032.25 40487.87 39348.56 TRUE FALSE 37738.21368 44054.02202 42137.98077 45180.44699 38395.56775 39939.4954 38912.26802 41664.76647 44696.72897 44223.35668 0.8533548 0.996170923 0.952844468 1.02164219 0.868219209 0.90313125 0.879903086 0.942143917 1.010704124 1 15.43252091 -8.203994294 4.789307125 1.005745094 0.92853135 0.273330311 0.051247052 0.284793224 13.51493674 0.039829949 0.013626782 6.25E-09 8.203994294 -0.077213744 ESS(ph)PLYSPTFSDSTSAVK ddPTM_A459_MK2206_30min_R2 10 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.075)S(0.925)PLYSPTFSDSTSAVK;ES(0.075)S(0.925)PLYSPTFSDSTSAVK;ES(0.014)S(0.986)PLYSPTFSDSTSAVK;ES(0.014)S(0.986)PLYSPTFSDSTSAVK;ES(0.009)S(0.991)PLYSPTFSDSTSAVK;ES(0.132)S(0.868)PLYSPTFSDSTSAVK;ES(0.01)S(0.99)PLYSPTFSDSTSAVK;ES(0.007)S(0.993)PLYSPTFSDSTSAVK;ES(0.008)S(0.518)PLY(0.095)S(0.373)PT(0.004)FS(0.002)DSTSAVK;ES(0.026)S(0.974)PLYSPTFSDSTSAVK 278.79 6.80E-67 848437900 528543 803866 565638 661656 637622 564161 706073 548527 564697 657549 TRUE FALSE 569008.6585 763947.1834 584496.0886 607596.5883 612585.7565 585630.5422 613364.767 620221.3623 613813.3243 636093.23 0.894536574 1.200998765 0.91888431 0.955200527 0.963043981 0.92066778 0.964268661 0.975047891 0.964973836 1 19.27887871 ESS(ph)PPREEAPPPPPPTEDSCAK ddPTM_A459_MK2206_30min_R2 1 ESSPPREEAPPPPPPTEDSCAK 22 1 C9JR56;Q9UPW6-2;Q9UPW6 C9JR56 SATB2 DNA-binding protein SATB;DNA-binding protein SATB2 1 ES(0.01)S(0.99)PPREEAPPPPPPTEDSCAK 127.37 5.85E-05 0 9461.9 13096 11560 11516 12141 9265.8 13755 12716 9904.1 11696 TRUE FALSE 10186.31034 12445.67168 11945.40463 10575.10596 11664.28334 9618.416512 11948.95198 14378.02486 10765.54072 11314.36048 0.900299258 1.099988966 1.055773736 0.93466228 1.030927321 0.850106953 1.056087262 1.270776628 0.951493523 1 13.46586742 -7.514239555 24.86139295 1.099367421 0.985117582 0.140853151 0.10458284 622.6457596 1791832.196 0.0453365 0.027852714 3.06E-08 7.514239555 -0.114249839 ESSAMAS(ph)PLPR ddPTM_A459_MK2206_30min_R1 2 ESSAMASPLPR 11 0 Q9C0C2;E9PKK0;E9PKE7 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 ESSAMAS(1)PLPR;ESSAMAS(1)PLPR 152.96 0.00056908 28223000 5324.9 4381.3 4897.6 3536.1 5031.1 4366.8 5858.2 4984.4 4428.9 4531 TRUE FALSE 4871.989293 4096.076574 4565.164557 3808.451035 4830.700633 4614.044442 5467.410167 4940.821916 4889.300004 5092.334487 0.956730023 0.804361258 0.896477749 0.747879198 0.948622021 0.906076467 1.073654957 0.970246933 0.96012939 1 12.31411147 -6.758028724 2.048312507 0.995076316 0.853664864 0.471737273 0.064864668 0.266197962 2.299311203 0.024694563 0.022751166 1.75E-07 6.758028724 -0.141411452 ESSAMAS(ph)PLPR ddPTM_A459_MK2206_30min_R2 1 ESSAMASPLPR 11 0 Q9C0C2;E9PKK0;E9PKE7 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 ESS(0.008)AMAS(0.992)PLPR 96.067 0.020599 8143300 39417 39313 37030 46075 36625 37942 44728 32602 46648 43907 TRUE FALSE 42434.79583 37360.77359 38264.56172 42310.52511 35186.91847 39385.9094 38855.15987 36863.19334 50705.35872 42474.31819 0.9990695 0.879608554 0.900887015 0.996143715 0.828428094 0.927287619 0.914791844 0.867893704 1.193788644 1 15.37430317 -8.251379829 24.99786888 1.096894327 0.912982563 0.549423946 0.06614701 411.9665625 1023738.751 0.042457599 0.015621576 5.61E-09 8.251379829 -0.183911764 ESSANNSVS(ph)PSESLR ddPTM_A459_MK2206_30min_R1 3 ESSANNSVSPSESLR 15 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 ESSANNS(0.007)VS(0.984)PS(0.009)ESLR;ESSANNS(0.072)VS(0.849)PS(0.078)ESLR;ESSANNS(0.003)VS(0.754)PS(0.223)ES(0.02)LR 252.01 3.48E-28 50875000 6513.8 6252.7 6120.7 5401.7 6822.2 5914 6227 5640.7 6010.5 5300.39 TRUE FALSE 5959.767105 5845.648094 5705.243937 5817.73987 6550.457328 6248.845569 5811.608192 5591.383955 6635.312984 5957.042329 1.000457404 0.981300412 0.957730972 0.9766155 1.09961571 1.048984584 0.975586184 0.938617462 1.113860305 1 12.5403805 ESSANNSVS(ph)PSESLR ddPTM_A459_MK2206_30min_R2 4 ESSANNSVSPSESLR 15 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 ESSANNS(0.001)VS(0.993)PS(0.006)ESLR;ESSANNS(0.01)VS(0.567)PS(0.179)ES(0.244)LR;ESSANNS(0.001)VS(0.987)PS(0.012)ESLR;ESSANNS(0.008)VS(0.966)PS(0.027)ESLR 236.31 6.96E-20 108818000 109242 142021 130571 150204 133625 144472 129643 103844 121766 129518 TRUE FALSE 117605.6515 134968.4437 134924.172 137931.8527 128378.2111 149969.9832 112620.7184 117416.7673 132356.9866 125291.8383 0.938653731 1.077232528 1.076879179 1.10088458 1.024633471 1.196965303 0.898867156 0.937146178 1.056389533 1 16.93493291 -7.284342418 24.99966459 0.967862908 1.0693353 0.301703498 0.071451859 990.4789453 1081146.418 0.029347024 0.019801683 5.20E-08 7.284342418 0.101472392 ESSFEESNIEDPLIVTPDCQEKT(ph)SPK ddPTM_A459_MK2206_30min_R1 1 ESSFEESNIEDPLIVTPDCQEKTSPK 26 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 ESSFEESNIEDPLIVT(0.058)PDCQEKT(0.55)S(0.392)PK 90.454 5.80E-05 14234000 2383.3 2729.5 3204.5 2549.6 1821 1319.9 1941.2 2358.4 3067.1 3034.3 TRUE FALSE 2180.58782 2551.809054 2986.987468 2745.970634 1748.465714 1394.631597 1811.70609 2337.780757 3385.936021 3410.211992 0.639428817 0.748284582 0.875894952 0.805219922 0.512714669 0.408957449 0.531259081 0.685523587 0.992881389 1 11.73564571 -8.244456362 4.683604686 1.004144498 0.64829173 0.521709519 0.132713811 0.17253994 10.2428511 0.126568053 0.040023711 5.70E-09 8.244456362 -0.355852768 ESSFEESNIEDPLIVTPDCQEKT(ph)SPK ddPTM_A459_MK2206_30min_R2 1 ESSFEESNIEDPLIVTPDCQEKTSPK 26 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 ESSFEESNIEDPLIVT(0.022)PDCQEKT(0.489)S(0.489)PK 107.7 0.00028056 0 7410.2 12144 9631.4 10223 10818 9816.1 8731.4 7011.3 10705 12361 TRUE FALSE 7977.530609 11540.94662 9952.506069 9387.748198 10393.23096 10189.65856 7584.956692 7927.700983 11636.10155 11957.66158 0.66714805 0.965150798 0.83231207 0.785082278 0.869169184 0.852144752 0.634317725 0.662980879 0.973108452 1 13.54564767 ESSIIAPAPAEDVDT(ph)PPR ddPTM_A459_MK2206_30min_R1 5 ESSIIAPAPAEDVDTPPR 18 0 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 ESSIIAPAPAEDVDT(1)PPR;ESSIIAPAPAEDVDT(1)PPR;ESSIIAPAPAEDVDT(1)PPR;ESSIIAPAPAEDVDT(1)PPR;ESSIIAPAPAEDVDT(1)PPR 210.43 2.69E-11 146369000 9965.24 9188.86 9887.05 7555.47 9563.35 9825.98 10063.51 8139.26 8941.39 8858.33 TRUE FALSE 9117.644008 8590.663544 9215.944593 8137.393609 9182.421519 10382.3185 9392.19161 8068.099308 9870.879488 9955.766797 0.915815345 0.862883163 0.925689079 0.817354783 0.922321877 1.042844686 0.943392086 0.810394565 0.991473554 1 13.28131672 -6.51524598 24.96194595 0.949070434 0.880842246 0.243314095 0.063274196 595.8140793 1948537.373 0.020961272 0.021856057 3.05E-07 6.51524598 -0.068228188 ESSIIAPAPAEDVDT(ph)PPR ddPTM_A459_MK2206_30min_R2 5 ESSIIAPAPAEDVDTPPR 18 0 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 ESSIIAPAPAEDVDT(1)PPR;ESSIIAPAPAEDVDT(1)PPR;ESSIIAPAPAEDVDT(1)PPR;ESSIIAPAPAEDVDT(1)PPR;ESSIIAPAPAEDVDT(1)PPR 202.81 2.32E-10 121080200 141439 156720 140981 162685 158159 148139 151696 115193 141373 152660 TRUE FALSE 152267.6786 148937.5127 145681.2362 149393.1151 151948.883 153776.5335 131778.133 130249.1206 153669.368 147678.7167 1.031073956 1.008523882 0.986474148 1.011608974 1.028915245 1.041291101 0.89232989 0.881976249 1.040565434 1 17.1721024 -7.247994153 24.86973977 0.943882578 1.016326554 0.312064089 0.045782431 797.7212358 1475553.237 0.017502764 0.013473458 5.65E-08 7.247994153 0.072443976 ESSIIAPAPAEDVDT(ph)PPRK ddPTM_A459_MK2206_30min_R2 2 ESSIIAPAPAEDVDTPPRK 19 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 ESSIIAPAPAEDVDT(1)PPRK;ESSIIAPAPAEDVDT(1)PPRK 108.69 0.00090887 19998200 321748 288463 308717 280196 292285 222780 320557 280599 230633 336644 TRUE FALSE 346381.2743 274138.3469 319009.4707 257303.0905 280808.4223 231258.049 278467.4808 317274.2527 250693.0415 325659.3338 1.063630728 0.84179484 0.979580308 0.790098928 0.862276597 0.710122588 0.855088284 0.974251986 0.769801493 1 18.31300405 -4.758321245 24.99308539 0.860014484 1.063631008 0.299399382 0.090993205 107.5689282 862060.1352 0.022006305 0.152140524 1.74E-05 4.758321245 0.203616523 ESSKELESPLT(ph)PGK ddPTM_A459_MK2206_30min_R1 2 ESSKELESPLTPGK 14 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 ESSKELES(0.005)PLT(0.995)PGK;ESSKELES(0.001)PLT(0.999)PGK 86.488 0.032207 22362800 13547.8 16076 16474.1 15365.6 11815.5 10272.3 11259.3 13140.7 11133.6 6825.2 TRUE FALSE 12395.48847 15029.44948 15355.88399 16549.06117 11344.86362 10853.90875 10508.21264 13025.81225 12290.97756 7670.757304 1.61594064 1.959317559 2.001873268 2.15742208 1.478975695 1.414972254 1.369905503 1.698112941 1.602316052 1 12.9051533 -6.28277896 21.9633368 1.458791614 1.940346424 0.572320765 0.213330358 130.1455717 133948.9108 0.065804273 0.074739533 5.21E-07 6.28277896 0.48155481 ESSKELESPLT(ph)PGK ddPTM_A459_MK2206_30min_R2 2 ESSKELESPLTPGK 14 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 ESSKELESPLT(1)PGK;ESSKELESPLT(1)PGK 108.18 0.0068761 19440400 90184 174111 170416 158682 199098 117191 170427 135748 165215 148238 TRUE FALSE 97088.55638 165464.9009 176097.5844 145717.173 191280.4121 121650.7856 148049.7302 153490.7297 179585.1021 143401.0062 0.677042365 1.153861506 1.228008011 1.016151677 1.333884728 0.848325886 1.032417652 1.0703602 1.252328047 1 17.12969562 -4.757377929 24.96357189 1.104223804 0.677041732 0.472807075 0.135229948 104.2836995 640887.9435 0.033007553 0.246155236 1.75E-05 4.757377929 -0.427182072 ESSPIPS(ph)PTSDR ddPTM_A459_MK2206_30min_R1 1 ESSPIPSPTSDR 12 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 ESS(0.01)PIPS(0.756)PT(0.23)S(0.004)DR 106.54 0.0088575 7405000 3754 3359.6 4049.1 3920 4911.4 4820.7 5308.1 4722.7 4556.9 4844.4 TRUE FALSE 3434.702587 3140.889429 3774.258373 4221.919079 4715.768538 5093.643868 4954.006334 4681.409932 5030.606062 5444.560845 0.630850253 0.576885725 0.693216309 0.775437946 0.86614305 0.935547239 0.909900077 0.859832421 0.923969114 1 12.41059997 -5.901243333 1.271807878 0.918042185 0.595635991 0.923516918 0.037229478 0.114642032 0.374995868 0.013193317 0.027924907 1.26E-06 5.901243333 -0.322406193 ESSPIPS(ph)PTSDR ddPTM_A459_MK2206_30min_R2 2 ESSPIPSPTSDR 12 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 ESSPIPS(0.708)PT(0.29)S(0.003)DR;ESS(0.001)PIPS(0.735)PT(0.258)S(0.007)DR 135.94 0.0014486 15988400 98708 140408 118521 165728 161747 160423 144814 137127 142644 133040 TRUE FALSE 106265.1604 133435.5429 122472.431 152187.4923 155396.0001 166528.0097 125799.7478 155049.9697 155050.9173 128698.9157 0.825688078 1.03680394 0.951619758 1.18250796 1.207438301 1.293934831 0.977473254 1.20474962 1.204756982 1 16.97364037 -5.757489052 24.58146797 1.162340797 0.947913846 0.47381114 0.103315052 69.69246771 433660.9817 0.027737431 0.045826713 1.75E-06 5.757489052 -0.214426951 ESSPIPS(ph)PTSDRK ddPTM_A459_MK2206_30min_R1 2 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 ESSPIPS(0.436)PT(0.128)S(0.436)DRK;ESS(0.001)PIPS(0.759)PT(0.12)S(0.12)DRK 140.31 0.0015957 26392000 4785.6 5845.2 5395.8 4787.2 5898.5 5479.2 6708.3 6563.8 6119.4 6378 TRUE FALSE 4378.55959 5464.676418 5029.54813 5155.910973 5663.550255 5789.427569 6260.801547 6506.413389 6755.533528 7168.154791 0.610834966 0.762354689 0.701651719 0.719280083 0.790098766 0.807659396 0.873418855 0.907683159 0.942436893 1 12.80738608 -7.108110897 0.443064385 1.007323777 0.653225804 0.919329291 0.032320036 0.286729701 0.124525542 0.031816707 0.036805663 7.80E-08 7.108110897 -0.354097974 ESSPLY(ph)SPTFSDSTSAVK ddPTM_A459_MK2206_30min_R2 1 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.004)S(0.147)PLY(0.782)S(0.044)PT(0.02)FS(0.004)DSTSAVK 121.21 0.013094 4750600 7738.3 17215 10867 12083 12869 10951 12583 10076 12578 12574 TRUE FALSE 8330.750198 16360.12813 11229.30036 11095.78025 12363.6984 11367.74798 10930.83699 11392.9678 13672.0117 12163.71141 0.684885552 1.344994762 0.923180432 0.91220351 1.01644128 0.934562453 0.898643236 0.936635819 1.124000007 1 13.57029587 -8.248989309 24.61549176 1.062000011 0.966155559 0.065386701 0.156215799 1704.827264 3370695.589 0.101851337 0.037883432 5.64E-09 8.248989309 -0.095844452 ESSPLYSPT(ph)FSDSTSAVK ddPTM_A459_MK2206_30min_R2 1 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.003)S(0.003)PLY(0.305)S(0.305)PT(0.384)FSDSTSAVK 86.367 0.0098749 15706000 19880 23551 21334 23405 23775 19583 27008 15683 19024 21014 TRUE FALSE 21402.02809 22381.49159 22045.26491 21492.73663 22841.47404 20328.24479 23461.81716 17732.82195 20678.67313 20328.3149 1.052818602 1.10100083 1.08446101 1.05728078 1.123628503 0.999996551 1.154144713 0.872321293 1.017234986 1 14.31120301 -7.75789683 24.99999999 0.958583609 1.080244636 0.512210229 0.053016781 64.68977805 456530.2494 0.023745079 0.013005254 1.75E-08 7.75789683 0.121661027 ESSPLYSPTFSDSTSAVK ddPTM_A459_MK2206_30min_R2 1 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 132.86 0.0075108 0 8791.1 8634.4 9897.6 11260 12052 10091 13688 8615.8 7884.1 9910.1 FALSE TRUE 9464.153375 8205.628252 10227.58104 10340.02198 11578.77792 10475.02008 11890.74916 9741.914642 8569.844767 9586.734249 0.98721349 0.855935717 1.066847247 1.078576052 1.207791686 1.092657813 1.240333658 1.016186992 0.893927436 1 13.22682372 -5.364184791 5.866409119 1.08796477 0.922685847 0.272083637 0.098498492 0.265237977 12.45748131 0.026873504 0.057095496 4.32E-06 5.364184791 -0.165278923 ESSS(ph)IYISK ddPTM_A459_MK2206_30min_R1 1 ESSSIYISK 9 0 O60701;O60701-2;O60701-3 O60701 UGDH UDP-glucose 6-dehydrogenase 1 ES(0.001)S(0.027)S(0.96)IYIS(0.012)K 131.42 0.0036081 8275200 2765 2324.6 2370.1 1818.2 2612.2 1865.6 1901 1651.1 2179.2 1582.9 TRUE FALSE 2529.82223 2173.268117 2209.224215 1958.238079 2508.150543 1971.22866 1774.187759 1636.664607 2405.735638 1779.001602 1.422046066 1.22162235 1.241833741 1.100751161 1.409864128 1.108053336 0.997294076 0.919990519 1.352295375 1 10.79685209 -6.948110152 9.7973393 1.059564648 1.26382793 0.355541876 0.137047645 0.448319838 81.14572518 0.047117067 0.041530672 1.13E-07 6.948110152 0.204263282 ESSS(ph)IYISK ddPTM_A459_MK2206_30min_R2 2 ESSSIYISK 9 0 O60701;O60701-2;O60701-3 O60701 UGDH UDP-glucose 6-dehydrogenase 1 ES(0.055)S(0.018)S(0.924)IYIS(0.003)K;ES(0.002)S(0.006)S(0.992)IYISK 139.15 0.0024046 4263600 85908 103983 78629 127612 116014 132665 111602 85335 104559 87756 TRUE FALSE 92485.18253 98819.35543 81250.45162 117185.6914 111458.7074 137713.6595 96948.52334 96488.5775 113653.3528 84892.52891 1.08943842 1.16405244 0.957097788 1.380400524 1.312938946 1.62221177 1.142014787 1.136596809 1.33879099 1 16.37334997 -5.767089823 24.99999875 1.29219266 1.079581833 0.241206649 0.165429725 189.4296936 838122.391 0.046913479 0.071798054 1.71E-06 5.767089823 -0.212610827 ESSTFTDENPS(ph)ETEESEAAGGIGK ddPTM_A459_MK2206_30min_R1 1 ESSTFTDENPSETEESEAAGGIGK 24 0 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 ES(0.035)S(0.032)T(0.03)FT(0.025)DENPS(0.591)ET(0.119)EES(0.169)EAAGGIGK 51.234 0.022445 1445400 967.45 970.93 1111.7 654.19 880.2 863.1 900.95 933.13 721.72 626.18 TRUE FALSE 885.1632972 907.7222805 1036.240901 704.5758272 845.1397701 911.9679761 840.8492694 924.9717428 796.7453767 703.7559058 1.257770329 1.289825454 1.472443631 1.001165065 1.200899009 1.295858363 1.194802434 1.314336029 1.13213313 1 9.458931314 -14.52287875 0.166997823 0.060638089 1.302195881 0.311957104 0.114193897 172.4047491 1.609245327 53.51266955 0.439693305 3.00E-15 14.52287875 1.241557792 ESSTSEGADQKMS(ph)SPEDDSDTKR ddPTM_A459_MK2206_30min_R2 1 ESSTSEGADQKMSSPEDDSDTKR 23 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 ES(0.001)S(0.005)T(0.005)S(0.009)EGADQKMS(0.779)S(0.197)PEDDS(0.002)DT(0.002)KR 45.237 0.030709 17543000 25214 36265 29679 26864 28590 20076 33664 23648 23563 36774 TRUE FALSE 27144.40323 34464.13283 30668.48305 24669.12527 27467.41295 20840.00625 29243.87636 26738.8748 25612.46715 35574.06739 0.763039068 0.968799335 0.862102236 0.693458102 0.772118989 0.585820171 0.822056023 0.751639516 0.719975786 1 15.11853832 -5.675037155 7.104846097 0.748815427 0.877226868 0.139282265 0.109997763 0.331638878 22.92876729 0.028090004 0.04880567 2.11E-06 5.675037155 0.128411441 ESTES(ph)SNTTIEDEDVK ddPTM_A459_MK2206_30min_R2 1 ESTESSNTTIEDEDVK 16 0 H0Y9J2;D6R938;Q13557-8;Q13557-12;Q13557;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11 H0Y9J2 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 ESTES(0.94)S(0.05)NT(0.007)T(0.002)IEDEDVK 220.78 9.27E-40 0 13549 11957 11866 12231 12681 10301 17094 11447 10028 11863 TRUE FALSE 14586.32186 11363.23277 12261.60652 11231.68817 12183.08022 10693.01177 14849.53727 12943.1622 10900.21731 11475.91128 1.271038221 0.990181301 1.068464736 0.978718631 1.061622029 0.931778881 1.293974561 1.127854851 0.949834575 1 13.4863211 ESTESSNT(ph)TIEDEDVK ddPTM_A459_MK2206_30min_R1 1 ESTESSNTTIEDEDVK 16 0 H0Y9J2;D6R938;Q13557-8;Q13557-12;Q13557;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11 H0Y9J2 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 ESTESSNT(0.752)T(0.248)IEDEDVK 233.84 2.65E-15 13965000 5635.5 6070.1 6575.5 5438.5 5533.1 4259.5 5939.1 4743.1 7494.3 7263.1 TRUE FALSE 5156.171132 5674.935387 6129.17338 5857.374212 5312.70491 4500.669209 5542.913476 4701.631577 8273.359304 8162.907662 0.631658638 0.695210043 0.750856635 0.717559778 0.650834866 0.551356134 0.67903665 0.575975102 1.013530919 1 12.99486742 -8.269323069 24.99745855 1.00676554 0.660077254 0.85591371 0.057460384 242.4098822 768618.7302 0.055946556 0.015499902 5.38E-09 8.269323069 -0.346688286 ESTESSNT(ph)TIEDEDVK ddPTM_A459_MK2206_30min_R2 1 ESTESSNTTIEDEDVK 16 0 H0Y9J2;D6R938;Q13557-8;Q13557-12;Q13557;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11 H0Y9J2 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 ESTESSNT(0.767)T(0.233)IEDEDVK 276.14 3.52E-51 32061000 110080 92165 92671 89136 78835 64577 107230 91882 74878 101660 TRUE FALSE 118507.8094 87588.22012 95760.60489 81853.30367 75739.54179 67034.52299 93150.57219 103891.2929 81390.75309 98342.84253 1.205047631 0.890641534 0.973742495 0.832325989 0.770158151 0.681641096 0.947202357 1.056419463 0.82762254 1 16.58553244 ESTESSNT(ph)TIEDEDVKAR ddPTM_A459_MK2206_30min_R2 1 ESTESSNTTIEDEDVKAR 18 1 H0Y9J2;D6R938;Q13557-8;Q13557-12;Q13557;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11 H0Y9J2 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 ES(0.015)T(0.005)ES(0.018)S(0.004)NT(0.479)T(0.479)IEDEDVKAR 88.555 0.0089393 5455200 13604 19287 17295 19698 24117 21646 18415 13852 19420 13431 TRUE FALSE 14645.5327 18329.23563 17871.60667 18088.61039 23170.0454 22469.7537 15997.08838 15662.50396 21109.1165 12992.74757 1.127208285 1.410728218 1.375506341 1.392208252 1.783306054 1.729407393 1.231232139 1.20548051 1.62468457 1 13.66541893 -10.92447319 3.543814768 0.996713642 1.434328064 0.275843142 0.209481692 50256561.93 64575376.55 1624508.214 0.055145528 1.19E-11 10.92447319 0.437614423 ESTESSNTT(ph)IEDEDVK ddPTM_A459_MK2206_30min_R1 1 ESTESSNTTIEDEDVK 16 0 H0Y9J2;D6R938;Q13557-8;Q13557-12;Q13557;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11 H0Y9J2 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 ESTESS(0.001)NT(0.078)T(0.921)IEDEDVK 255.23 9.35E-30 9192300 2162.7 2671.5 2579.3 1992.7 1866.6 1809.2 1847.2 1858.3 2479.1 2766.2 TRUE FALSE 1978.751008 2497.584864 2404.224302 2146.178099 1792.249369 1911.635341 1723.976658 1842.053079 2736.811317 3108.89774 0.636479928 0.803366683 0.773336566 0.690334092 0.576490293 0.614891676 0.55452987 0.592510025 0.880315644 1 11.60218745 -8.441579087 3.957770491 0.997111197 0.658719195 0.692604377 0.077704488 0.131466213 3.714061715 0.086263152 0.022669841 3.62E-09 8.441579087 -0.338392001 ESTESSNTT(ph)IEDEDVK ddPTM_A459_MK2206_30min_R2 1 ESTESSNTTIEDEDVK 16 0 H0Y9J2;D6R938;Q13557-8;Q13557-12;Q13557;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11 H0Y9J2 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 ESTESSNT(0.465)T(0.535)IEDEDVK 256.33 7.53E-31 30811000 65107 66215 64340 59200 55241 47894 69668 58382 51812 67233 TRUE FALSE 70091.64198 62926.85939 66485.06349 54363.17063 53071.96078 49716.63973 60520.50791 66012.72786 56318.51411 65039.19272 1.077683148 0.967522147 1.022230761 0.835852482 0.815999685 0.764410468 0.930523664 1.014968438 0.865916561 1 15.98902173 -5.74992673 24.99372469 0.88370484 1.016983085 0.377482575 0.077798802 249.4959895 541645.7244 0.022646589 0.038804908 1.78E-06 5.74992673 0.133278245 ESTESSNTT(ph)IEDEDVKAR ddPTM_A459_MK2206_30min_R1 2 ESTESSNTTIEDEDVKAR 18 1 H0Y9J2;D6R938;Q13557-8;Q13557-12;Q13557;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11 H0Y9J2 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 ESTES(0.002)SNT(0.235)T(0.763)IEDEDVKAR;ESTESSNT(0.004)T(0.996)IEDEDVKAR 205.63 3.49E-11 22662000 3831.7 3057.4 4044.8 3492.4 3762.4 3163.8 3544.1 4055.7 2268.81 1797.32 TRUE FALSE 3505.793794 2858.362704 3770.250245 3761.385253 3612.535641 3342.931622 3307.679556 4020.241442 2504.660919 2019.985571 1.73555388 1.41504115 1.86647385 1.862085209 1.788396756 1.654928466 1.637476823 1.990232753 1.239940005 1 10.98012927 -8.450711005 4.775333332 1.003718726 1.734011271 0.74428349 0.149198821 0.094475766 3.809678309 0.145765042 0.037992212 3.54E-09 8.450711005 0.730292545 ESTESSNTT(ph)IEDEDVKAR ddPTM_A459_MK2206_30min_R2 1 ESTESSNTTIEDEDVKAR 18 1 H0Y9J2;D6R938;Q13557-8;Q13557-12;Q13557;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11 H0Y9J2 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 ESTESSNT(0.061)T(0.939)IEDEDVKAR 109.23 0.0020255 5954600 10877 19517 14340 18894 21149 25653 17248 12988 23525 14576 TRUE FALSE 11709.75148 18547.81416 14818.08844 17350.29976 20318.58399 26629.24289 14983.31688 14685.57619 25571.16198 14100.38631 0.830456076 1.315411773 1.050899466 1.230484001 1.440994845 1.888547044 1.062617474 1.041501691 1.8135079 1 13.78344707 -4.760092113 7.044393993 1.320843174 0.819947141 0.189240368 0.301355185 0.197028309 56.957093 0.075295833 0.46741035 1.74E-05 4.760092113 -0.500896033 ESTGAQVQVAGDMLPNSTER ddPTM_A459_MK2206_30min_R1 2 ESTGAQVQVAGDMLPNSTER 20 0 Q15365;H3BRU6;F8VZX2;F8W0G4;J3QT27;E9PFP8;P57721-2;P57721-3;P57721-5;P57721-4;P57721;F8VXH9;Q15366;Q15366-2;Q15366-6;Q15366-3;Q15366-5;Q15366-8;Q15366-4;Q15366-7 Q15365;H3BRU6;Q15366;Q15366-5 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 0 ; 191.19 2.23E-13 16004500 1766.8 1939.89 1906.23 1510.87 1700.71 1352.74 1470.63 1345.54 1468.67 1579.68 FALSE TRUE 1616.524382 1813.602808 1776.840419 1627.237469 1632.967119 1429.33097 1372.526956 1333.776086 1621.343502 1775.382684 0.910521656 1.021527823 1.000821082 0.916555897 0.919783173 0.805083311 0.773087948 0.751261177 0.913236068 1 10.79391432 -6.398856148 1.895354631 0.829670916 0.976048075 0.319293843 0.075215462 0.33121227 2.356867658 0.026627836 0.03159209 3.99E-07 6.398856148 0.14637716 ESTHQSEDVFLPS(ph)PR ddPTM_A459_MK2206_30min_R1 2 ESTHQSEDVFLPSPR 15 0 Q13017-2;Q13017;A0A0A0MSK6 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 ESTHQSEDVFLPS(1)PR;ESTHQSEDVFLPS(1)PR 182.17 1.36E-05 4653300 3067.5 1248.7 1364.67 1092.07 4932.1 4948.7 3635.7 2337.1 1208.12 1028.61 TRUE FALSE 2806.593017 1167.409403 1272.040003 1176.181421 4735.644013 5228.891117 3393.169087 2316.666981 1333.708397 1156.041972 2.427760483 1.00983306 1.100340674 1.017421035 4.096429132 4.523097986 2.935160805 2.00396442 1.153685099 1 10.17497806 -6.231973871 24.99414835 2.779962013 1.341159793 0.214837277 1.125352824 1038.746302 881117.5735 0.356080206 0.459625766 5.86E-07 6.231973871 -1.43880222 ESTHQSEDVFLPS(ph)PR ddPTM_A459_MK2206_30min_R2 2 ESTHQSEDVFLPSPR 15 0 Q13017-2;Q13017;A0A0A0MSK6 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 ESTHQSEDVFLPS(1)PR;ESTHQSEDVFLPS(1)PR 163.79 6.63E-05 6554100 12804.9 29706 20336.1 45100 46213 62836 35246 24548 35378 19945.1 TRUE FALSE 13785.25299 28230.84324 21014.09542 41415.18573 44398.44542 65227.26801 30618.15786 27756.50789 38455.11449 19294.29302 0.714473081 1.463170649 1.08913529 2.146499262 2.301118023 3.380650845 1.586902294 1.438586418 1.99308233 1 14.23588656 -5.75928533 24.99081182 2.051990684 1.126350553 0.297342032 0.618347538 70.97374699 823397.7409 0.177277191 0.288805214 1.74E-06 5.75928533 -0.925640131 ESTLHLVLR ddPTM_A459_MK2206_30min_R1 1 ESTLHLVLR 9 0 P62979;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;A0A2R8Y422;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QTR3;J3QS39;P62987;P0CG47;M0R2S1;M0R1M6 P62979 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin 0 111.46 0.014419 5754600 7536.2 6257.1 7292.3 5183.3 9645 8292 9294.8 7440.4 6202.1 7011.8 FALSE TRUE 6895.206616 5849.761653 6797.318994 5582.518664 9260.819226 8761.485874 8674.760851 7375.349367 6846.830489 7880.47472 0.874973509 0.74231082 0.86255197 0.708398778 1.17516007 1.111796711 1.10079166 0.935901659 0.868834776 1 12.94406683 -6.254130122 24.99669107 1.036297234 0.797826285 0.595951922 0.094764661 426.6824653 1459196.558 0.03012499 0.038074017 5.57E-07 6.254130122 -0.23847095 ESTLHLVLR ddPTM_A459_MK2206_30min_R2 2 ESTLHLVLR 9 0 P62979;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;A0A2R8Y422;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QTR3;J3QS39;P62987;P0CG47;M0R2S1;M0R1M6 P62979 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin 0 ; 135.71 0.0037976 8237800 93629 121167 104711 152149 128781 155502 142565 102786 131454 124756 FALSE TRUE 100797.3082 115150.023 108202.0125 139717.94 123724.4109 161419.7376 123846.0442 116220.4831 142887.6313 120685.2219 0.835208376 0.954135238 0.896563894 1.157705457 1.025182776 1.337526956 1.026190633 0.963005091 1.183969578 1 16.8808895 -5.752250663 24.99160526 1.101360289 0.901185702 0.433405381 0.106687097 188.9187164 513818.6129 0.028984418 0.049320637 1.77E-06 5.752250663 -0.200174587 ESTPGDS(ph)PSTVNK ddPTM_A459_MK2206_30min_R1 2 ESTPGDSPSTVNK 13 0 Q5T6F2 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 1 EST(0.001)PGDS(0.831)PS(0.129)T(0.038)VNK;ESTPGDS(1)PSTVNK 298.78 7.07E-74 11150900 7629.6 8342.4 8257.9 6898.1 5660.4 5670.3 5991.2 5974.9 6428.5 6707 TRUE FALSE 6980.662455 7799.308244 7697.376756 7429.392857 5434.934282 5991.347486 5591.53798 5922.662079 7096.76558 7537.913795 0.926073532 1.034677293 1.021154787 0.985603319 0.721013059 0.794828337 0.741788528 0.785716345 0.941476086 1 12.87994958 -6.186040739 7.971648094 0.81399679 0.997944841 0.452897767 0.085464368 0.257567994 24.80379875 0.024625951 0.031841486 6.52E-07 6.186040739 0.183948051 ESTPSEEPS(ph)PPHNSK ddPTM_A459_MK2206_30min_R1 2 ESTPSEEPSPPHNSK 15 0 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 ESTPS(0.001)EEPS(0.997)PPHNS(0.003)K;ESTPS(0.001)EEPS(0.998)PPHNS(0.001)K 89.374 0.011022 20350500 11735.3 4784.4 5927.9 4056.2 16044.5 16267.9 13848.3 9195.3 4888.4 3999.3 TRUE FALSE 10737.15111 4472.93469 5525.530664 4368.609227 15405.41359 17188.97444 12924.50517 9114.906462 5396.566673 4494.763477 2.388813375 0.995143507 1.229326235 0.971933061 3.427413627 3.824222237 2.875458351 2.027894573 1.200634183 1 12.13402949 -6.245391152 24.59902706 2.539722251 1.355722698 0.212211989 0.913076632 951.4310544 1458370.745 0.284205441 0.365661606 5.68E-07 6.245391152 -1.183999553 ESTQLS(ph)PADLTEGKPTDPSK ddPTM_A459_MK2206_30min_R1 4 ESTQLSPADLTEGKPTDPSK 20 1 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 ES(0.003)T(0.003)QLS(0.985)PADLT(0.009)EGKPTDPSK;ES(0.054)T(0.044)QLS(0.902)PADLTEGKPTDPSK;ES(0.049)T(0.087)QLS(0.864)PADLTEGKPTDPSK;ES(0.004)T(0.003)QLS(0.991)PADLT(0.002)EGKPTDPSK 129.66 9.69E-05 126095000 19386.8 22503.2 21128.4 15291.9 15174.5 15693.7 21102.8 17477.7 25108.6 31893.7 TRUE FALSE 17737.85086 21038.23759 19694.26308 16469.68479 14570.06753 16582.26373 19695.07072 17324.89431 27718.72882 35844.93234 0.494849612 0.586923624 0.549429495 0.459470383 0.406474963 0.462611104 0.549452027 0.483328972 0.77329561 1 15.12948155 -8.480120542 2.53569594 0.99885629 0.49821938 0.910292379 0.05105578 0.077396434 1.114705858 0.054562532 0.014844682 3.31E-09 8.480120542 -0.500636911 down ESTQLS(ph)PADLTEGKPTDPSK ddPTM_A459_MK2206_30min_R2 2 ESTQLSPADLTEGKPTDPSK 20 1 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 ES(0.026)T(0.093)QLS(0.816)PADLT(0.042)EGKPT(0.021)DPS(0.004)K;ES(0.152)T(0.129)QLS(0.719)PADLTEGKPTDPSK 109.68 0.00021655 165330000 320820 256064 284360 244181 211229 193774 284673 219487 164014 323420 TRUE FALSE 345382.2259 243348.2341 293840.4205 224230.6312 202935.0881 201148.2054 247295.0931 248174.7045 178279.6413 312866.8319 1.103927264 0.777801318 0.93918687 0.716696717 0.648630879 0.642919558 0.790416458 0.793227914 0.569825955 1 18.2551892 -1.522888223 0.816823143 0.731888932 100.4058278 0.395836475 0.125296766 527.8455731 1.706939762 0.042507023 97504.65241 0.029999345 1.522888223 99.67393888 ESTSSKS(ph)PPR ddPTM_A459_MK2206_30min_R1 1 ESTSSKSPPR 10 1 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347 A0A494C1K3 GTF2I General transcription factor II-I 1 ESTS(0.001)S(0.003)KS(0.997)PPR 131.17 0.012601 116520000 5208.5 4509.7 3635.8 4618.8 2285.8 2398.8 4759.6 5643.7 207.83 2476.6 TRUE FALSE 4765.489724 4216.11771 3389.012026 4974.540776 2194.751746 2534.617983 4442.095768 5594.357726 229.4346722 2783.419905 1.712098744 1.514725716 1.21757124 1.78720457 0.788509036 0.910612868 1.595912913 2.009886369 0.082429055 1 11.44264285 -1.522878745 0.19102914 0.968068398 4.092648885 0.15192916 0.506315217 127.4933118 1.495465258 1.031291414 117.6087169 0.03 1.522878745 3.124580487 ESVAS(ph)GDDR ddPTM_A459_MK2206_30min_R1 1 ESVASGDDR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.005)VAS(0.995)GDDR 99.568 0.018691 2257100 2769.5 2652.2 2484.1 2149.2 1759.8 1354.6 3775.9 2742.9 719.38 3534.2 TRUE FALSE 2533.939482 2479.541298 2315.486213 2314.731756 1689.70344 1431.296281 3524.016601 2718.919114 794.1621253 3972.043378 0.637943557 0.624248293 0.582945853 0.582755911 0.42539904 0.360342561 0.887204964 0.684513953 0.199937929 1 11.95566566 -10.92463512 4.028873056 1.001703095 0.561861375 0.356901544 0.179352795 46595896.72 63188368.9 588110.9196 0.043755953 1.19E-11 10.92463512 -0.43984172 ESVAS(ph)GDDR ddPTM_A459_MK2206_30min_R2 2 ESVASGDDR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.031)VAS(0.969)GDDR;ES(0.001)VAS(0.999)GDDR 97.597 0.02045 19110400 89791 67944 69321 70037 59734 61789 85649 80002 60741 110412 TRUE FALSE 96665.468 64569.99976 71632.12754 64314.75306 57388.54302 64140.42369 74403.18342 90458.53609 66024.14239 106809.2655 0.905028862 0.604535566 0.670654622 0.602145823 0.537299295 0.600513667 0.696598587 0.846916564 0.618149953 1 16.70467728 -9.573323408 0.582850652 1.023412694 0.654712476 0.42779184 0.11106644 4.545023384 1.744137403 0.372130221 0.047724076 2.67E-10 9.573323408 -0.368700218 ESVAS(ph)GDDRAEEDMDEAIEK ddPTM_A459_MK2206_30min_R1 4 ESVASGDDRAEEDMDEAIEK 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.005)VAS(0.995)GDDRAEEDMDEAIEK;ES(0.006)VAS(0.994)GDDRAEEDMDEAIEK;ES(0.001)VAS(0.999)GDDRAEEDMDEAIEK;ES(0.006)VAS(0.994)GDDRAEEDMDEAIEK 110.91 0.00020027 286836000 13236 12900.6 14207.9 9295.5 10980.7 11039.5 16607.5 12138.3 16514.5 20941.1 TRUE FALSE 12110.20869 12060.7686 13243.50733 10011.44102 10543.31547 11664.54695 15499.64398 12032.17612 18231.24137 23535.44157 0.514552007 0.512451341 0.562704859 0.425377233 0.447976106 0.495616236 0.658566101 0.511236472 0.774629247 1 14.5225473 -8.579456964 0.959936976 1.003728707 0.498005982 0.865680773 0.061514884 0.219411961 0.440593672 0.059398474 0.019983984 2.63E-09 8.579456964 -0.505722725 ESVAS(ph)GDDRAEEDMDEAIEK ddPTM_A459_MK2206_30min_R2 3 ESVASGDDRAEEDMDEAIEK 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.025)VAS(0.975)GDDRAEEDMDEAIEK;ES(0.006)VAS(0.994)GDDRAEEDMDEAIEK;ES(0.009)VAS(0.991)GDDRAEEDMDEAIEK 81.808 0.0019555 234634300 238980 178233 197937 187099 182463 151965 235820 162060 173410 258360 TRUE FALSE 257276.4925 169382.2084 204536.1208 171812.4132 175298.5858 157748.1346 204856.5507 183241.7984 188492.8883 249929.7344 1.029395295 0.677719315 0.818374498 0.687442867 0.701391478 0.631169936 0.819656578 0.733173261 0.754183526 1 17.93116302 -9.320392965 7.517262394 1 0.753719063 0.310003876 0.106241598 8166330.685 76903047.2 0.098362519 0.026280563 4.78E-10 9.320392965 -0.246280937 ESVASMGADS(ph)GDDFASDGSSSR ddPTM_A459_MK2206_30min_R1 1 ESVASMGADSGDDFASDGSSSR 22 0 Q5T165;Q92805 Q5T165 GOLGA1 Golgin subfamily A member 1 1 ESVAS(0.001)MGADS(0.999)GDDFASDGSSSR 333.01 7.78E-162 4232100 1584.6 1915.6 1735 1599.4 2265.5 1797.7 2050 1643.9 1568.3 1937.1 TRUE FALSE 1449.821449 1790.894092 1617.233034 1722.586065 2175.260338 1899.48422 1913.24824 1629.527556 1731.330397 2177.082572 0.665946927 0.822611928 0.742844141 0.791235981 0.999162992 0.872490665 0.878812896 0.748491388 0.795252518 1 11.08818041 -3.928299778 0.681307453 0.863357138 0.229203025 0.341327402 0.083397652 11.65897223 1.738936536 0.036171301 7.472602774 0.000117951 3.928299778 -0.634154113 ESVASMGADS(ph)GDDFASDGSSSR ddPTM_A459_MK2206_30min_R2 4 ESVASMGADSGDDFASDGSSSR 22 0 Q5T165;Q92805 Q5T165 GOLGA1 Golgin subfamily A member 1 1 ESVAS(0.002)MGADS(0.997)GDDFASDGSSSR;ESVAS(0.009)MGADS(0.99)GDDFASDGSSSR;ESVASMGADS(1)GDDFASDGSSSR;ESVAS(0.019)MGADS(0.981)GDDFASDGSSSR 299.47 7.28E-107 27654100 67257.1 97275 87348 106130 93684 106716 90039 78780.6 86035 91878.6 TRUE FALSE 72406.35529 92444.46495 90260.13872 97458.83951 90005.49544 110777.1522 78216.77114 89077.49491 93518.16878 88880.60881 0.814647382 1.040097117 1.015521157 1.096514086 1.012656154 1.246359061 0.88002065 1.002215175 1.05217741 1 16.43958108 -4.761434428 12.41902472 1.04032688 0.814401685 0.372316172 0.08712321 0.062840444 631.1835674 0.021271102 0.11894806 1.73E-05 4.761434428 -0.225925196 ESVFTVEGGHR ddPTM_A459_MK2206_30min_R1 3 ESVFTVEGGHR 11 0 F5H3X6;F5GY37;J3KPX7;Q99623-2;Q99623;F5H2D2;F5H0C5;F5GWA7 F5H3X6 PHB2 Prohibitin-2 0 ;; 119.45 0.0070487 14569400 13413.2 10029.3 12057.5 9884.9 14109.5 14133.6 13759.3 11957.8 9847.4 9989.7 FALSE TRUE 12272.3369 9376.390747 11239.07049 10646.23671 13547.48874 14933.83222 12841.4422 11853.25422 10871.07247 11227.29945 1.093080037 0.835142127 1.00104843 0.948245547 1.206656043 1.330135736 1.143769457 1.055752923 0.968271356 1 13.45472333 -6.248142312 24.36977993 1.132170733 0.962052766 0.282070537 0.114030825 703.1443985 1288664.69 0.035674315 0.045752576 5.65E-07 6.248142312 -0.170117966 ESVGGS(ph)PQTK ddPTM_A459_MK2206_30min_R1 2 ESVGGSPQTK 10 0 Q08495;Q08495-2;E5RGQ0;Q08495-3;Q08495-4;E5RFK4;E5RGQ7;E5RJC0 Q08495 DMTN Dematin 1 ESVGGS(0.998)PQT(0.002)K;ES(0.009)VGGS(0.809)PQT(0.181)K 111.52 0.0087958 41026000 7592 7214.8 8208.1 6218.1 6941.4 7033.1 8828.6 8268.8 5114.3 8932.1 TRUE FALSE 6946.260533 6745.115209 7650.957041 6697.019139 6664.909339 7431.308044 8239.660203 8196.506753 5645.949787 10038.67598 0.691949869 0.671912832 0.762148022 0.667121755 0.663923146 0.740267746 0.820791528 0.816492809 0.562419765 1 13.29328138 -6.99340138 5.5986057 0.784438506 0.693329309 0.193548228 0.102409092 0.320487834 34.72822793 0.036114426 0.030380023 1.02E-07 6.99340138 -0.091109197 ESVGGS(ph)PQTK ddPTM_A459_MK2206_30min_R2 2 ESVGGSPQTK 10 0 Q08495;Q08495-2;E5RGQ0;Q08495-3;Q08495-4;E5RFK4;E5RGQ7;E5RJC0 Q08495 DMTN Dematin 1 ESVGGS(1)PQTK;ESVGGS(1)PQTK 152.96 0.00061384 87367000 265490 266290 288340 289970 296290 278040 397960 358590 306150 392560 TRUE FALSE 285816.1185 253066.4258 297953.1117 266278.5234 284656.1659 288621.007 345707.374 405458.9442 332778.3736 379750.7993 0.752641256 0.666401299 0.784601671 0.701192792 0.749586746 0.760027385 0.910353249 1.067697408 0.876307237 1 18.53469348 -7.317235923 2.861355864 0.981079319 0.730512719 0.818821558 0.053277354 0.10223775 1.65565433 0.023099514 0.015006216 4.82E-08 7.317235923 -0.2505666 ESVNS(ph)PVFGK ddPTM_A459_MK2206_30min_R1 1 ESVNSPVFGK 10 0 E7ESJ3;Q9UPS8;Q9UPS8-2 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 1 ESVNS(1)PVFGK 174.46 8.29E-05 22146000 3107.8 2932.8 3131.9 2566.7 2926.7 1806.8 2932.3 2795.3 2411.7 2433.6 TRUE FALSE 2843.46529 2741.874187 2919.315354 2764.387679 2810.123342 1909.099455 2736.691617 2770.860987 2662.404845 2735.092741 1.039622989 1.002479421 1.067355161 1.010710766 1.027432562 0.698001726 1.000584579 1.013077526 0.973423974 1 11.41737404 -6.589480493 24.99999929 0.933020244 1.029300542 0.221429984 0.086571501 88.20021579 33105.98025 0.029318815 0.029318814 2.57E-07 6.589480493 0.096280298 ESVNS(ph)PVFGK ddPTM_A459_MK2206_30min_R2 2 ESVNSPVFGK 10 0 E7ESJ3;Q9UPS8;Q9UPS8-2 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 1 ES(0.002)VNS(0.998)PVFGK;ES(0.102)VNS(0.898)PVFGK 164.13 0.00038059 47747000 187486 209847 196391 221890 205908 162599 211104 184949 175534 212038 TRUE FALSE 201840.0723 199426.3031 202938.5779 203760.8772 197823.0173 168786.8189 183385.7912 209122.4693 190801.63 205119.2174 0.984013467 0.972245827 0.989368917 0.993377801 0.964429466 0.822871796 0.894044905 1.019516708 0.930198703 1 17.64610314 -6.534183411 24.99784611 0.927819964 0.983527522 0.181670963 0.051026899 375.6979261 830769.0593 0.017719218 0.017731923 2.92E-07 6.534183411 0.055707558 ESVPEFPLS(ph)PPK ddPTM_A459_MK2206_30min_R1 7 ESVPEFPLSPPK 12 0 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK 199.96 0.00010239 1411568000 46435 59631.7 56329.7 47096.4 31191.4 29617.1 40414.2 38979.7 59800.9 62075.4 TRUE FALSE 42485.45941 55749.66549 52506.19691 50723.77289 29948.98049 31293.99461 37718.24246 38638.90459 66017.41755 69765.7692 0.608972852 0.799097697 0.752606866 0.727058176 0.429279012 0.44855801 0.540641104 0.553837577 0.946272338 1 16.09023173 -8.299619331 6.433780183 0.980844367 0.609210378 0.608311072 0.117382703 0.177179482 21.31413191 0.125820754 0.034054349 5.02E-09 8.299619331 -0.371633989 ESVPEFPLS(ph)PPK ddPTM_A459_MK2206_30min_R2 9 ESVPEFPLSPPK 12 0 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ES(0.002)VPEFPLS(0.998)PPK 176.87 3.68E-05 1121014700 3596296 2994474 3113525 2565043 2921782 1966174.2 3596549 2730997 2249950 3857421 TRUE FALSE 3871631.187 2845772.776 3217328.37 2355470.782 2807058.158 2040998.337 3124317.796 3087947.685 2445646.584 3731553.669 1.037538658 0.762624105 0.86219539 0.631230579 0.752249172 0.546956715 0.837269961 0.827523321 0.655396331 1 21.83134501 ESVPEFPLS(ph)PPKK ddPTM_A459_MK2206_30min_R2 1 ESVPEFPLSPPKK 13 1 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 ESVPEFPLS(1)PPKK 108.66 0.0031836 6846800 51284 46318 54177 40759 40722 29414 66618 45346 32821 61974 TRUE FALSE 55210.34247 44017.91547 55983.23414 37428.85932 39123.04967 30533.37038 57870.97658 51272.8779 35675.71125 59951.79346 0.920912274 0.73422183 0.93380416 0.624315924 0.652575134 0.509298699 0.965291833 0.855235097 0.595073295 1 15.87151529 -9.695545513 13.26147474 0.999995666 0.754319724 0.192348885 0.150901454 0 0 0.148561699 0.036031504 2.02E-10 9.695545513 -0.245675943 ESVPSAS(ph)PTGIPK ddPTM_A459_MK2206_30min_R2 2 ESVPSASPTGIPK 13 0 Q5THJ4-2;Q5THJ4;H3BLS7;A0A2R8YD87 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 ESVPSAS(0.897)PT(0.103)GIPK;ESVPS(0.047)AS(0.95)PT(0.002)GIPK 163.38 1.53E-06 5121800 174696 170791 165403 141995 135782 127357 164669 136156 108999 156587 TRUE FALSE 188070.8601 162309.7673 170917.4535 130393.5543 130450.5164 132203.6599 143047.7625 153952.0567 118479.536 151477.579 1.241575561 1.071510176 1.128334996 0.860810921 0.861186964 0.872760581 0.944349411 1.016335604 0.782158896 1 17.20874474 -5.752956783 24.36455908 0.904476652 1.139577374 0.678278669 0.076248527 78.90972364 226648.8875 0.020414266 0.034609169 1.77E-06 5.752956783 0.235100722 ESVS(ph)PEDSEK ddPTM_A459_MK2206_30min_R1 4 ESVSPEDSEK 10 0 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 ES(0.004)VS(0.971)PEDS(0.024)EK;ES(0.001)VS(0.998)PEDSEK;ES(0.002)VS(0.509)PEDS(0.489)EK;ES(0.033)VS(0.955)PEDS(0.013)EK 211.63 7.96E-05 86632000 25885 30238.1 25650.4 27233.3 19726.6 20211.3 17167.3 16631 20422.3 13934.8 TRUE FALSE 23683.34482 28269.59419 23909.32231 29330.81348 18940.84775 21355.64634 16022.10074 16485.59692 22545.27117 15661.14823 1.512235532 1.805078005 1.52666471 1.872839275 1.209416288 1.36360668 1.02304764 1.052642928 1.439566936 1 13.93490237 -6.280791921 21.56076561 1.185206593 1.677299541 0.680054975 0.167266896 78.81565041 87808.34871 0.050069978 0.056925973 5.24E-07 6.280791921 0.492092949 ESVS(ph)PEDSEK ddPTM_A459_MK2206_30min_R2 3 ESVSPEDSEK 10 0 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 ES(0.007)VS(0.97)PEDS(0.023)EK;ES(0.005)VS(0.976)PEDS(0.019)EK;ES(0.001)VS(0.997)PEDS(0.003)EK 184.87 0.00018291 260034900 492630 505764 396350 483770 394836 349523 656902 528144 293671 456165 TRUE FALSE 530346.1316 480648.4952 409564.1112 444244.4435 379332.7547 362824.3427 570649.9783 597174.2342 319213.9727 441280.3734 1.20183485 1.089213398 0.928126733 1.006716977 0.859618459 0.822208203 1.293168726 1.353276217 0.723381306 1 18.75133606 -9.993726361 15.65217728 1 1.034851862 0.001847562 0.195979583 0 0 0.195156282 0.047332351 1.01E-10 9.993726361 0.034851862 ESVSTASDQPSHS(ph)LER ddPTM_A459_MK2206_30min_R1 5 ESVSTASDQPSHSLER 16 0 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 ESVSTASDQPS(0.002)HS(0.998)LER;ESVSTASDQPS(0.003)HS(0.997)LER;ESVSTASDQPS(0.009)HS(0.991)LER;ESVSTASDQPS(0.004)HS(0.996)LER;ESVSTASDQPS(0.001)HS(0.999)LER 300.87 4.66E-88 92175000 15371.1 12768.4 13197.3 12557.6 15262.7 14230.4 14604 13080.1 10876.9 10760.7 TRUE FALSE 14063.70723 11937.17484 12301.50405 13524.78853 14654.75434 15036.11295 13629.79381 12965.74206 12007.59268 12093.81676 1.162884101 0.987047768 1.017173015 1.118322594 1.211755944 1.243289299 1.127005153 1.072096785 0.9928704 1 13.561982 -8.077088467 2.947937662 0.996201361 1.121869843 0.322318247 0.073380727 0.391204472 6.271763485 0.067854515 0.022718304 8.37E-09 8.077088467 0.125668482 ESVSTASDQPSHS(ph)LER ddPTM_A459_MK2206_30min_R2 4 ESVSTASDQPSHSLER 16 0 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 ESVSTASDQPSHS(1)LER;ESVSTASDQPS(0.08)HS(0.92)LER;ESVSTASDQPS(0.015)HS(0.985)LER;ESVSTASDQPSHS(1)LER 226.79 4.55E-15 90972000 115323 142641 111950 130360 134113 146464 135568 119239 136059 126917 TRUE FALSE 124152.2175 135557.6554 115682.3571 119709.171 128847.0498 152037.7902 117767.7588 134823.9467 147893.1659 122775.7087 1.011211573 1.104108107 0.942225122 0.975023254 1.04945067 1.238337712 0.95921058 1.098132099 1.204580022 1 16.90566562 -6.528279212 24.98447681 1.102550679 1.010531944 0.201285379 0.086379572 238.85706 1105024.985 0.028190271 0.028280821 2.96E-07 6.528279212 -0.092018735 ESVSTEDLSPPS(ph)PPLPK ddPTM_A459_MK2206_30min_R1 3 ESVSTEDLSPPSPPLPK 17 0 Q13127-4;Q13127 Q13127-4 REST RE1-silencing transcription factor 1 ESVSTEDLS(0.087)PPS(0.913)PPLPK;ESVSTEDLS(0.033)PPS(0.967)PPLPK;ESVSTEDLS(0.005)PPS(0.995)PPLPK 229.16 2.54E-16 18476100 7233.5 7115.3 6790.6 5397.6 8903 7957.8 7887.4 6851.7 5858.4 4913.6 TRUE FALSE 6618.25284 6652.092677 6329.672992 5813.324087 8548.374658 8408.363759 7361.245937 6791.796309 6467.401644 5522.333864 1.198452141 1.204579955 1.146195277 1.052693341 1.547964116 1.522610542 1.332995454 1.229877888 1.171135575 1 12.4310624 -6.230490145 24.99788752 1.32496183 1.154038397 0.173033551 0.155570776 1136.058825 917601.9226 0.047804937 0.061708429 5.88E-07 6.230490145 -0.170923432 ESVSTEDLSPPS(ph)PPLPK ddPTM_A459_MK2206_30min_R2 4 ESVSTEDLSPPSPPLPK 17 0 Q13127-4;Q13127 Q13127-4 REST RE1-silencing transcription factor 1 ESVSTEDLS(0.041)PPS(0.959)PPLPK;ESVSTEDLS(0.013)PPS(0.987)PPLPK;ESVSTEDLS(0.113)PPS(0.887)PPLPK;ESVSTEDLS(0.003)PPS(0.997)PPLPK 197.49 3.88E-09 24773000 102737 143829 122285 159836 135238 163121 133617 111704 129277 119213 TRUE FALSE 110602.6237 136686.661 126361.9209 146776.8875 129927.8766 169328.684 116072.9274 126304.0963 140521.2798 115323.0896 0.95906747 1.185249732 1.095720912 1.272745016 1.12664235 1.468298192 1.006502062 1.095219499 1.218500825 1 16.81532187 -11.18390338 2.513845798 0.977167501 1.162771058 0.108277152 0.13613654 15366020.05 12226968.75 2252566.676 0.035547387 6.55E-12 11.18390338 0.185603557 ESYDAPPT(ph)PSGAR ddPTM_A459_MK2206_30min_R1 2 ESYDAPPTPSGAR 13 0 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 ESYDAPPT(0.991)PS(0.009)GAR;ESYDAPPT(0.988)PS(0.012)GAR 201.3 0.00022786 20109900 6139.8 6765.1 5342.3 4973.2 7154.2 6403.5 6141.3 5433.6 4359 4086.2 TRUE FALSE 5617.577769 6324.69076 4979.679561 5356.236726 6869.233065 6766.060636 5731.625082 5386.094608 4812.133649 4592.429305 1.223225747 1.377199373 1.084323618 1.166318819 1.495773284 1.473307521 1.248059513 1.172820364 1.04784055 1 12.1650418 -8.056044753 1.987776207 1.011666315 1.301019427 0.450213291 0.121042361 0.353877062 2.512246907 0.116207577 0.037453256 8.79E-09 8.056044753 0.289353112 ESYDAPPT(ph)PSGAR ddPTM_A459_MK2206_30min_R2 1 ESYDAPPTPSGAR 13 0 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 ESYDAPPT(0.998)PS(0.002)GAR 165.78 0.00081648 7301800 39141 61700 45581 59996 49369 44210 36766 35104 46120 39331 TRUE FALSE 42137.66505 58636.06772 47100.64779 55094.13488 47430.525 45892.44253 31938.58004 39692.21333 50131.43423 38047.63269 1.107497683 1.541122629 1.237938985 1.44803056 1.246609096 1.206183914 0.839436721 1.043224257 1.317596673 1 15.21551907 -6.863972494 2.790513393 1.052232615 1.336821422 0.383455912 0.156743695 0.266622193 4.200979657 0.058698265 0.051345089 1.37E-07 6.863972494 0.284588807 ESYS(ph)IYVYK ddPTM_A459_MK2206_30min_R1 2 ESYSIYVYK 9 0 Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 1 ES(0.004)YS(0.996)IYVYK;ES(0.035)YS(0.964)IYVYK 176.48 0.00048639 19777000 6765.3 7679.9 6086.4 6637 6652.5 6671.2 5990.2 5523.1 5395.6 4077.5 TRUE FALSE 6189.875709 7179.937114 5673.272126 7148.18289 6387.516838 7048.917579 5590.604688 5474.812119 5956.491928 4582.651484 1.350719279 1.566764817 1.237989 1.559835592 1.393847396 1.538174484 1.219949784 1.194682192 1.299791605 1 12.16196686 -8.243516524 0.621518172 1.014958857 1.446898132 0.553594136 0.116693285 0.534594615 0.482452297 0.112253541 0.051807885 5.71E-09 8.243516524 0.431939275 ESYS(ph)IYVYK ddPTM_A459_MK2206_30min_R2 1 ESYSIYVYK 9 0 Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 1 ES(0.194)YS(0.806)IYVYK 91.549 0.027071 6491400 24815 27443 25626 25765 21674 20931 29711 22340 19935 29153 TRUE FALSE 26714.85548 26080.22053 26480.35805 23659.91708 20822.96986 21727.54387 25809.91001 25259.9147 21668.91027 28201.74 0.947276852 0.924773455 0.938961853 0.838952387 0.738357628 0.770432742 0.915188567 0.895686391 0.768353664 1 14.78349656 -5.76323452 22.68871148 0.83752411 0.935781041 0.23041091 0.074295562 20.0313177 253200.4594 0.020861685 0.032877368 1.72E-06 5.76323452 0.09825693 ESYS(ph)VYVYK ddPTM_A459_MK2206_30min_R1 4 ESYSVYVYK 9 0 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880 U3KQK0 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L 1 ES(0.279)YS(0.721)VYVYK;ESYS(1)VYVYK;ES(0.001)YS(0.989)VYVY(0.009)K;ES(0.007)YS(0.993)VYVYK 150.15 0.0013502 55383400 12837.7 12845.7 12032.5 12549.1 13249.3 12274.3 10999.8 9613.8 9285.8 7403.8 TRUE FALSE 11745.7862 12009.4426 11215.76742 13515.63386 12721.55233 12969.26026 10266.02341 9529.74756 10251.09214 8321.03864 1.411576933 1.443262448 1.347880705 1.624272455 1.528841876 1.558610748 1.233743029 1.145259381 1.231948628 1 13.0225479 -7.405761329 4.032176236 1.147896441 1.485144324 0.766751514 0.090999906 0.122339031 3.407394107 0.042258655 0.027220511 3.93E-08 7.405761329 0.337247883 ESYS(ph)VYVYK ddPTM_A459_MK2206_30min_R2 2 ESYSVYVYK 9 0 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880 U3KQK0 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L 1 ES(0.013)YS(0.986)VYVYK;ES(0.062)YS(0.938)VYVYK 130.94 0.0037228 16186100 61914 77791 51721 74999 55143 52225 76210 66159 55264 53401 TRUE FALSE 66654.18344 73928.01206 53445.35233 68871.34179 52977.80875 54212.45897 66203.53546 74806.20846 60070.76283 51658.52974 1.290284175 1.43109013 1.03458911 1.333203677 1.025538454 1.049438674 1.281560582 1.448090157 1.16284306 1 15.65671896 -5.244594204 24.65173772 1.183700803 1.360687156 0.214941968 0.145327059 1172.853371 1716381.327 0.037877571 0.099602109 5.69E-06 5.244594204 0.176986353 ESYSIYVYK ddPTM_A459_MK2206_30min_R1 3 ESYSIYVYK 9 0 Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 0 ;; 156.51 0.00037113 28084000 9179 9895.2 10519 9971.9 9036 7571 7784.5 8230.4 7172.1 7939.5 FALSE TRUE 8398.277849 9251.020681 9804.999588 10739.93747 8676.076986 7999.663477 7265.210209 8158.442481 7917.665461 8923.1052 0.941183328 1.036749032 1.098832678 1.203609867 0.972315891 0.896511169 0.814202012 0.914305312 0.887321766 1 13.12333013 -6.52103598 5.327043381 0.894692922 1.072381668 0.531578246 0.073888424 0.13470742 12.34403371 0.025151977 0.026557334 3.01E-07 6.52103598 0.177688746 ESYSVYVYK ddPTM_A459_MK2206_30min_R2 2 ESYSVYVYK 9 0 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880 U3KQK0 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L 0 ; 158.07 0.012022 51337000 160181 186414 152513 178969 182953 167670 147321 131506 144674 131650 FALSE TRUE 172444.5805 177156.9518 157597.7073 164346.6602 175769.346 174050.7993 127977.5757 148694.2857 157257.483 127354.2713 1.354054158 1.391056225 1.237474846 1.29046838 1.380160588 1.366666368 1.004894256 1.167564183 1.234803367 1 16.95848782 -7.794603255 0.364413422 0.99844698 1.379861219 0.546096498 0.093388912 1.007430248 0.398304083 0.133851926 0.123653964 1.60E-08 7.794603255 0.381414239 ESYTEEIVS(ph)EAESHVS(ph)GISR ddPTM_A459_MK2206_30min_R1 1 ESYTEEIVSEAESHVSGISR 20 0 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 2 ESYTEEIVS(1)EAES(0.001)HVS(0.972)GIS(0.028)R 96.793 0.0021786 0 241.12 277.56 384.18 356.31 346.82 240.16 461.27 306.64 320.74 278.68 TRUE FALSE 220.6114778 259.4907936 358.102932 383.7530579 333.005425 253.7576517 430.4995199 303.9590788 354.0820708 313.2049823 0.704367715 0.828501487 1.143350049 1.2252457 1.063218799 0.810196727 1.374497675 0.970479705 1.130512255 1 8.290963352 -5.119075751 3.761490218 1.092295375 0.726578072 0.455141248 0.143891391 0.200343176 4.90222992 0.036706804 0.119065665 7.60E-06 5.119075751 -0.365717303 ESYTEEIVS(ph)EAESHVSGISR ddPTM_A459_MK2206_30min_R1 6 ESYTEEIVSEAESHVSGISR 20 0 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 ESYTEEIVS(1)EAESHVSGISR;ESYTEEIVS(1)EAESHVSGISR;ESYTEEIVS(1)EAESHVSGISR;ESYTEEIVS(1)EAESHVSGISR;ESYTEEIVS(1)EAESHVSGISR;ESYTEEIVS(1)EAESHVSGISR 234.73 9.69E-25 89961300 13933.5 7741.57 8941.7 5730.05 19641.5 17917.44 15781 12411.1 7093.1 7249.69 TRUE FALSE 12748.38266 7237.592386 8334.762317 6171.379444 18859.13746 18931.90997 14728.27828 12302.59106 7830.453128 8147.83633 1.564634112 0.888283968 1.022941795 0.757425554 2.314619084 2.323550597 1.807630601 1.509921231 0.961046935 1 12.99220128 -6.244294381 24.99516535 1.719570426 1.043648716 0.267959822 0.473459467 1070.373842 1560464.903 0.1471244 0.189446261 5.70E-07 6.244294381 -0.67592171 ESYTEEIVS(ph)EAESHVSGISR ddPTM_A459_MK2206_30min_R2 4 ESYTEEIVSEAESHVSGISR 20 0 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 ESYTEEIVS(1)EAESHVSGISR;ESYTEEIVS(1)EAESHVSGISR;ESYTEEIVS(1)EAESHVSGISR;ESYTEEIVS(1)EAESHVSGISR 169.51 1.47E-09 13154200 13387 34711.8 24229.9 58637 55529.5 79843 51448.3 35326.3 51232.2 30995.9 TRUE FALSE 14411.91901 32988.06249 25037.71277 53846.16953 53349.13282 82881.48131 44693.07641 39943.5687 55688.28415 29984.50632 0.480645533 1.100170272 0.835021678 1.795799769 1.779223318 2.764143602 1.490539011 1.332140282 1.857235319 1 14.8719296 -5.760366651 24.66270501 1.767637168 0.834768016 0.456539532 0.453158829 21.41369051 492280.7512 0.12739157 0.205557253 1.74E-06 5.760366651 -0.932869152 ESYTEEIVSEAESHVS(ph)GISR ddPTM_A459_MK2206_30min_R1 1 ESYTEEIVSEAESHVSGISR 20 0 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 ESYTEEIVSEAESHVS(0.995)GIS(0.005)R 174.25 2.90E-10 3076700 556.09 746.74 752.67 564.83 868.42 742.88 937.8 986.42 719.88 614.24 TRUE FALSE 508.7916254 698.1270903 701.5808575 608.3333045 833.8289925 784.9412236 875.2410731 977.7958339 794.7141021 690.3366885 0.737019535 1.011284931 1.016287949 0.881212479 1.207858435 1.137041152 1.267846672 1.416404271 1.151197836 1 9.431156349 -6.268450928 23.65939545 1.218116892 0.926070536 0.555065212 0.123966041 195.8072665 660720.5846 0.038151709 0.04425611 5.39E-07 6.268450928 -0.292046356 ET(ph)QSPEQVKSEK ddPTM_A459_MK2206_30min_R2 1 ETQSPEQVKSEK 12 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 ET(0.5)QS(0.5)PEQVKSEK 164.7 0.0053122 23594000 7292.3 21193 15083 18177 27212 18490 22675 13476 18298 13664 TRUE FALSE 7850.604095 20140.58644 15585.85969 16691.88095 26143.52015 19193.64991 19697.74526 15237.35947 19889.52696 13218.1448 0.59392632 1.523707505 1.179126113 1.262800583 1.977850943 1.452068365 1.490204984 1.152760822 1.504713957 1 13.69023208 -4.756603854 24.99688174 1.410766011 0.593925074 0.463973576 0.257299457 133.8332496 691759.9119 0.063858897 0.510306958 1.75E-05 4.756603854 -0.816840937 ET(ph)SHGSPTVTK ddPTM_A459_MK2206_30min_R2 1 ETSHGSPTVTK 11 0 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 ET(0.975)S(0.006)HGS(0.018)PTVTK 223.77 1.19E-05 5908600 22687 24290 23714 25656 26267 18668 26143 21137 25138 27779 TRUE FALSE 24423.93416 23083.79392 24504.61292 23559.82273 25235.6256 19378.42382 22710.3927 23899.67847 27324.4578 26872.5735 0.908879611 0.859009425 0.911881883 0.876723725 0.939084811 0.721122739 0.845114172 0.889370661 1.016815818 1 14.71384687 -8.201651305 4.210487708 1.00996419 0.865411191 0.502040001 0.055848085 0.180174318 6.301763267 0.045347816 0.014975936 6.29E-09 8.201651305 -0.144552999 ET(ph)T(ph)SSS(ph)ISRHYGLSDSRK ddPTM_A459_MK2206_30min_R1 1 ETTSSSISRHYGLSDSRK 18 2 Q9Y483-2;Q9Y483-3;Q9Y483-4;Q9Y483 Q9Y483-2 MTF2 Metal-response element-binding transcription factor 2 3 ET(0.862)T(0.433)S(0.433)S(0.433)S(0.831)IS(0.006)RHY(0.001)GLSDSRK 68.576 0.036109 17205000 341.27 295.24 324.57 240.12 380.56 220.64 359.64 196.16 175.71 237.64 TRUE FALSE 312.2431944 276.0198223 302.5390927 258.614084 365.4014894 233.1324461 335.6490718 194.4449938 193.9756833 267.0806373 1.169097085 1.033469985 1.132763108 0.968299637 1.368131711 0.872891605 1.25673308 0.728038527 0.726281341 1 8.061131578 -7.7708688 24.98511042 0.795369872 1.106912108 0.447021801 0.150256571 165.7094349 439072.3019 0.074417527 0.036491412 1.69E-08 7.7708688 0.311542236 ET(ph)VNSPAIYK ddPTM_A459_MK2206_30min_R2 2 ETVNSPAIYK 10 0 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 1 ET(0.717)VNS(0.283)PAIYK;ET(0.953)VNS(0.047)PAIYK 168.98 0.00058236 27270000 169149 164067 141901 201980 179222 159363 216946 181902 158680 167298 TRUE FALSE 182099.1775 155919.6714 146631.9085 185477.5879 172184.8438 165427.6706 188460.7296 205677.216 172481.6996 161839.08 1.125186683 0.963424109 0.906035233 1.146061804 1.06392624 1.02217382 1.164494569 1.270874847 1.065760505 1 17.3042005 -6.650156003 1.104339825 1.137565128 1.014270188 0.118196023 0.095541881 0.802381046 2.087537912 0.049441535 0.049902244 2.24E-07 6.650156003 -0.12329494 ET(ph)YYLSDSPLLGPPVGEPR ddPTM_A459_MK2206_30min_R1 1 ETYYLSDSPLLGPPVGEPR 19 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 ET(0.686)Y(0.006)Y(0.001)LS(0.031)DS(0.277)PLLGPPVGEPR 201.04 4.08E-15 4581200 1494.7 1342.7 1141.4 1319.8 1396.6 1302 1504.7 1544.6 1143 1190.9 TRUE FALSE 1367.567916 1255.289986 1063.924948 1421.451225 1340.970465 1375.718115 1404.324208 1531.095725 1261.81894 1338.437683 1.021764355 0.93787705 0.794900623 1.062022717 1.001892342 1.027853693 1.049226443 1.143942482 0.942755092 1 10.38633425 -5.806182372 24.99978279 1.037749799 0.920149427 0.352076576 0.070822112 133.4256873 74549.8826 0.019846621 0.029437465 1.56E-06 5.806182372 -0.117600372 ETAPEEPGS(ph)PAK ddPTM_A459_MK2206_30min_R1 2 ETAPEEPGSPAK 12 0 P35612 P35612 ADD2 Beta-adducin 1 ETAPEEPGS(1)PAK;ETAPEEPGS(1)PAK 228.62 7.27E-10 61369000 15059.3 18474 18241.6 12807.8 10688.5 10569.4 16845.5 12388.9 23284.4 31600 TRUE FALSE 13778.42746 17271.33924 17003.41102 13794.25898 10262.75441 11167.83029 15721.76743 12280.58515 25704.8967 35514.84657 0.387962466 0.486313216 0.478769097 0.388408238 0.288970822 0.31445526 0.442681553 0.345787363 0.723778903 1 15.11613463 -8.485578937 2.921618525 0.997955583 0.393098565 0.905971496 0.063564625 0.070650936 1.365494879 0.067873622 0.018189849 3.27E-09 8.485578937 -0.604857018 down ETAPEEPGS(ph)PAK ddPTM_A459_MK2206_30min_R2 4 ETAPEEPGSPAK 12 0 P35612 P35612 ADD2 Beta-adducin 1 ETAPEEPGS(1)PAK;ETAPEEPGS(1)PAK;ETAPEEPGS(1)PAK;ETAPEEPGS(1)PAK 206.45 1.03E-05 119197000 1360329 764272 977052 815942 661151 526168 963028 806082 537005 1118015 TRUE FALSE 1464476.834 726319.3638 1009626.426 749276.9285 635190.8897 546191.6919 836581.2668 911439.6851 583712.7242 1081534.262 1.354073454 0.671563897 0.933513122 0.692790746 0.587305379 0.505015616 0.773513421 0.842728443 0.539708028 1 20.04464794 -2.986504271 1.619874101 0.709291328 199.9972787 0.56693729 0.160434178 304.082825 3.360837971 0.043338004 223027.6063 0.001031563 2.986504271 199.2879874 ETAPTSAYS(ph)SPAR ddPTM_A459_MK2206_30min_R1 2 ETAPTSAYSSPAR 13 0 A0A6I8PIW1;O43301;A0A6I8PIU5;A0A6I8PRZ9;A0A6I8PIX2 A0A6I8PIW1 HSPA12A Heat shock 70 kDa protein 12A 1 ETAPT(0.046)S(0.046)AYS(0.454)S(0.454)PAR;ETAPT(0.021)S(0.021)AY(0.002)S(0.628)S(0.328)PAR 87.216 0.025429 19807700 7609.7 6600.5 6754.6 5346 7051 5964.6 7116.3 6794.3 5249.7 6513.1 TRUE FALSE 6962.455055 6170.80625 6296.116571 5757.749846 6770.143739 6302.310497 6641.584611 6734.898151 5795.425101 7319.991999 0.951156102 0.84300724 0.860126155 0.786578708 0.924884035 0.86097232 0.907321294 0.920069059 0.791725606 1 12.83762636 ETAPTSAYSS(ph)PAR ddPTM_A459_MK2206_30min_R1 1 ETAPTSAYSSPAR 13 0 A0A6I8PIW1;O43301;A0A6I8PIU5;A0A6I8PRZ9;A0A6I8PIX2 A0A6I8PIW1 HSPA12A Heat shock 70 kDa protein 12A 1 ETAPT(0.002)S(0.002)AYS(0.209)S(0.788)PAR 133.98 0.0012684 18926000 4157.7 3187.6 3274.9 3157.7 4125.6 3512.5 4033.2 3838.1 3298.5 3314.8 TRUE FALSE 3804.065782 2980.086661 3052.608912 3400.906601 3961.268616 3711.374715 3764.152587 3804.543896 3641.390879 3725.462449 1.021098946 0.799923956 0.8193906 0.912881729 1.063295811 0.996218527 1.010385325 1.021227283 0.977433252 1 11.86320381 -6.081627714 5.236099889 1.011033195 0.871002791 0.515153267 0.058867583 0.164959245 7.737912795 0.017203398 0.022692071 8.29E-07 6.081627714 -0.140030404 ETAPTSAYSS(ph)PAR ddPTM_A459_MK2206_30min_R2 1 ETAPTSAYSSPAR 13 0 A0A6I8PIW1;O43301;A0A6I8PIU5;A0A6I8PRZ9;A0A6I8PIX2 A0A6I8PIW1 HSPA12A Heat shock 70 kDa protein 12A 1 ETAPT(0.002)S(0.002)AYS(0.229)S(0.767)PAR 122.52 0.0019473 0 69181 95583 66380 86351 82349 75123 67652 67427 70533 58056 TRUE FALSE 74477.55055 90836.48721 68593.07607 79295.84708 79115.56449 77981.85841 58769.21114 76239.94041 76667.83285 56161.63747 1.326128544 1.617411658 1.221351071 1.411921921 1.408711855 1.388525369 1.046429801 1.357509215 1.36512816 1 15.77729738 -14.07271222 0.110370938 2.49E-10 1.552824418 0.409271179 0.133034406 148.7343248 1.201135072 34.61511013 1.697253233 8.46E-15 14.07271222 1.552824418 ETAVPGPLGIEDIS(ph)PNLSPDDKSFSR ddPTM_A459_MK2206_30min_R1 2 ETAVPGPLGIEDISPNLSPDDKSFSR 26 1 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 ETAVPGPLGIEDIS(0.841)PNLS(0.155)PDDKS(0.002)FS(0.002)R;ETAVPGPLGIEDIS(0.625)PNLS(0.372)PDDKS(0.002)FSR 101.51 7.71E-07 19920300 5632 5836.2 5439.3 5533.8 4705.9 4414.7 5551.8 5869.5 4913.1 4114.9 TRUE FALSE 5152.968825 5456.262319 5070.095471 5960.014235 4518.454038 4664.656499 5181.449552 5818.18358 5423.834327 4624.684878 1.114231339 1.179812779 1.096311555 1.288739534 0.977029605 1.008643102 1.120389754 1.258071357 1.172800844 1 12.17513935 -11.05402967 2.942597188 0.994385469 1.134620215 0.161516047 0.09234927 63167401.76 67032377.67 2809923.103 0.023932421 8.83E-12 11.05402967 0.140234746 ETAVPGPLGIEDISPNLS(ph)PDDK ddPTM_A459_MK2206_30min_R2 2 ETAVPGPLGIEDISPNLSPDDK 22 0 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 ETAVPGPLGIEDIS(0.024)PNLS(0.976)PDDK;ETAVPGPLGIEDIS(0.039)PNLS(0.961)PDDK 108.49 7.41E-05 0 14725.6 10690.2 11607.1 11907.1 12071 9810.6 17757.9 9941.5 11844.5 16068.5 TRUE FALSE 15853.00326 10159.34021 11994.07492 10934.25184 11597.03189 10183.94926 15426.2664 11240.88818 12874.7132 15544.18616 1.019867048 0.653578136 0.771611636 0.70343032 0.746068772 0.655161303 0.992413899 0.723157074 0.828265505 1 13.92408746 -8.555061795 16.3556356 1.000000008 0.777173268 0.224511526 0.120310295 106.3157453 54032.15415 0.110620731 0.028562138 2.79E-09 8.555061795 -0.22282674 ETAVPGPLGIEDISPNLS(ph)PDDKSFSR ddPTM_A459_MK2206_30min_R1 2 ETAVPGPLGIEDISPNLSPDDKSFSR 26 1 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 ETAVPGPLGIEDIS(0.192)PNLS(0.747)PDDKS(0.023)FS(0.038)R;ETAVPGPLGIEDIS(0.003)PNLS(0.983)PDDKS(0.01)FS(0.004)R 95.152 2.36E-06 16399800 7386.3 8218.4 8134.7 7429.4 7280.1 5992.7 7117.4 8726.8 6752.1 5626.6 TRUE FALSE 6758.056398 7683.380666 7582.539229 8001.613675 6990.118201 6332.001495 6642.611232 8650.502508 7454.004958 6323.665687 1.068692865 1.215020061 1.199073386 1.265344196 1.105390219 1.001318192 1.050436813 1.367956963 1.178747474 1 12.62654538 -4.736013955 23.25494388 1.160605665 1.068691846 0.046309442 0.111842365 3489.712037 3191403.814 0.029090295 1.784429345 1.84E-05 4.736013955 -0.091913819 ETAVPGPLGIEDISPNLS(ph)PDDKSFSR ddPTM_A459_MK2206_30min_R2 4 ETAVPGPLGIEDISPNLSPDDKSFSR 26 1 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 ET(0.007)AVPGPLGIEDIS(0.102)PNLS(0.885)PDDKS(0.005)FS(0.001)R;ET(0.003)AVPGPLGIEDIS(0.262)PNLS(0.691)PDDKS(0.033)FS(0.012)R;ETAVPGPLGIEDIS(0.432)PNLS(0.568)PDDKSFSR;ETAVPGPLGIEDIS(0.017)PNLS(0.791)PDDKS(0.062)FS(0.131)R 103.35 3.10E-07 15989300 70418.6 106732.6 97803.6 97471.7 115076 90054.1 126047 90268.1 115300.5 113914.6 TRUE FALSE 75809.90216 101432.4143 101064.3232 89507.95031 110557.538 93481.17188 109496.8775 102066.4506 125329.1291 110197.5759 0.687945279 0.920459578 0.917119296 0.812249721 1.003266516 0.848305156 0.993641435 0.926213211 1.13731294 1 16.74973296 -2.43200258 0.229709359 1.038170977 2.52E-17 0.50011802 0.082577092 30.24190861 0.569075477 0.119779956 10.82425608 0.00369826 2.43200258 -1.038170977 ETCSTLAES(ph)PR ddPTM_A459_MK2206_30min_R1 4 ETCSTLAESPR 11 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 ETCSTLAES(1)PR;ETCSTLAES(1)PR;ETCSTLAES(0.999)PR;ETCS(0.002)T(0.002)LAES(0.995)PR 185.3 2.03E-05 120640900 14119.3 12786.5 13322.4 11511.5 13306.8 11506.1 13782.8 12826.8 11225.3 10880 TRUE FALSE 12918.37939 11954.09653 12418.11261 12398.11772 12776.76198 12157.56544 12863.37456 12714.65664 12392.21011 12227.89654 1.056467836 0.977608576 1.015555911 1.013920725 1.044886333 0.994248307 1.051969529 1.039807345 1.013437599 1 13.57788863 -6.045207632 24.91904929 1.026267256 1.012998483 0.015570142 0.024937849 1279.23724 705129.3865 0.007049568 0.009101213 9.01E-07 6.045207632 -0.013268773 ETCSTLAES(ph)PR ddPTM_A459_MK2206_30min_R2 3 ETCSTLAESPR 11 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 ETCSTLAES(1)PR;ETCSTLAES(1)PR;ETCSTLAES(0.999)PR 202.18 1.85E-05 236601300 111845 144456 109259 131308 148822 142958 141711 99494 116632 131690 TRUE FALSE 120407.9392 137282.5251 112901.6405 120579.7164 142978.5005 148398.3669 123104.1755 112498.2074 126776.4405 127392.9661 0.945169446 1.077630338 0.886247051 0.94651785 1.12234219 1.164886661 0.966334165 0.883080211 0.995160443 1 16.9589261 -7.502353849 24.97726761 0.948413611 1.024680784 0.111124279 0.085269786 1602.873223 1950584.312 0.038746721 0.025774942 3.15E-08 7.502353849 0.076267174 ETDKS(ph)PTSTEPR ddPTM_A459_MK2206_30min_R1 1 ETDKSPTSTEPR 12 1 Q6IQ19;Q6IQ19-2 Q6IQ19 CCSAP "Centriole, cilia and spindle-associated protein" 1 ET(0.004)DKS(0.915)PT(0.08)S(0.001)T(0.001)EPR 153 0.0022819 4618100 1880.4 1690.5 1546.8 1815.6 1392.8 1328.3 1377.8 1197 1330.1 1359.8 TRUE FALSE 1720.462106 1580.448143 1441.807526 1955.437827 1337.321827 1403.507198 1285.889476 1186.534755 1468.368655 1528.26229 1.125763632 1.034147183 0.943429368 1.279517161 0.87506041 0.91836801 0.841406272 0.776394709 0.960809322 1 10.57767645 -6.333023562 24.99962724 0.882613931 1.080440374 0.49384125 0.098392534 126.4118348 44146.72533 0.029815644 0.033807765 4.64E-07 6.333023562 0.197826443 ETDKSPT(ph)STEPR ddPTM_A459_MK2206_30min_R1 2 ETDKSPTSTEPR 12 1 Q6IQ19;Q6IQ19-2 Q6IQ19 CCSAP "Centriole, cilia and spindle-associated protein" 1 ET(0.001)DKS(0.058)PT(0.397)S(0.148)T(0.397)EPR;ETDKS(0.103)PT(0.854)S(0.036)T(0.007)EPR 146.67 0.0067374 8774000 3103.23 2871.49 3173.58 2479.52 2658.87 2103.52 2988.05 2644.37 2619.74 2425.81 TRUE FALSE 2839.283993 2684.555479 2958.166232 2670.49306 2552.961578 2222.619485 2788.722637 2621.250552 2892.071348 2726.337657 1.04142786 0.984674614 1.085032965 0.979516625 0.936406968 0.81523999 1.022882338 0.961454846 1.060789862 1 11.41274854 -5.980141308 20.86677192 0.95935557 1.031886191 0.187625918 0.065131741 60.04273054 63086.24506 0.018926105 0.028063757 1.05E-06 5.980141308 0.072530621 ETDPS(ph)PEER ddPTM_A459_MK2206_30min_R1 2 ETDPSPEER 9 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H0Y482 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 ETDPS(1)PEER;ETDPS(1)PEER 141.1 0.0022363 25983000 11557.6 11568.7 11551.7 10277.9 12201 11248.8 12251.8 11784.3 9461.9 10408 TRUE FALSE 10574.56543 10815.57553 10767.60279 11069.50564 11715.00833 11885.69733 11434.50478 11681.27111 10445.49836 11697.42162 0.904008232 0.924611926 0.920510788 0.946320138 1.00150347 1.016095489 0.977523522 0.99861931 0.892974427 1 13.51390294 -5.991400924 3.300779624 0.982464284 0.917454643 0.448833891 0.032243253 0.227546614 5.195025684 0.009725131 0.014338676 1.02E-06 5.991400924 -0.065009641 ETDPS(ph)PEER ddPTM_A459_MK2206_30min_R2 2 ETDPSPEER 9 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H0Y482 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 ET(0.025)DPS(0.975)PEER;ETDPS(1)PEER 115.91 0.0080154 22525000 124349 131093 126941 143744 133952 139823 147491 165742 155634 137049 TRUE FALSE 133869.255 124583.1122 131173.1496 131999.6554 128692.3714 145144.0622 128125.2545 187405.0485 169170.764 132577.1024 1.009746424 0.939703086 0.989410292 0.995644444 0.970698327 1.094789822 0.966420688 1.41355517 1.276017962 1 17.0164721 -7.743357826 24.99770501 1.258589942 0.995749384 0.516650526 0.102888693 154.0954096 213037.1014 0.045893047 0.026428848 1.81E-08 7.743357826 -0.262840558 ETDPVKS(ph)PPLPEHQK ddPTM_A459_MK2206_30min_R2 4 ETDPVKSPPLPEHQK 15 1 Q96JM3;A0A2R8Y4S6;S4R3K0;A0A2R8Y735 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 ET(0.004)DPVKS(0.996)PPLPEHQK;ET(0.004)DPVKS(0.996)PPLPEHQK;ET(0.022)DPVKS(0.978)PPLPEHQK;ET(0.007)DPVKS(0.993)PPLPEHQK 74.133 0.017621 178295700 268925 271089 268868 263219 261350 193547 267978 229983 189225 288784 TRUE FALSE 289514.1048 257627.1145 277831.9249 241713.1657 251088.0858 200912.5667 232792.1667 260042.5677 205683.4485 279361.0017 1.036344024 0.922201427 0.99452652 0.865235893 0.898794335 0.719186162 0.833302305 0.930847778 0.736264 1 18.09177111 -5.877307217 2.051532066 0.841274308 0.982721022 0.323402372 0.083775773 0.363578426 3.117120337 0.025118946 0.044067881 1.33E-06 5.877307217 0.141446714 ETDSPST(ph)PGKDQR ddPTM_A459_MK2206_30min_R1 1 ETDSPSTPGKDQR 13 1 Q7Z5J4-3;Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 ETDSPS(0.013)T(0.987)PGKDQR 222.81 7.15E-08 14931000 4216.7 4324.1 3701.1 3202.1 3049.4 2608.8 3427.3 3383 3793.4 3922.9 TRUE FALSE 3858.047522 4042.600304 3449.879644 3448.726297 2927.935941 2756.508002 3198.67107 3353.422788 4187.737505 4408.898468 0.875059281 0.91691844 0.782481082 0.782219487 0.664096931 0.62521467 0.725503455 0.760603314 0.949837592 1 12.10620254 -10.42237106 7.725874375 1.000000001 0.779495298 0.293020474 0.098712588 1.28E-09 2.03E-10 0.105292635 0.025537215 3.78E-11 10.42237106 -0.220504703 ETDSPST(ph)PGKDQR ddPTM_A459_MK2206_30min_R2 1 ETDSPSTPGKDQR 13 1 Q7Z5J4-3;Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 ETDSPS(0.047)T(0.953)PGKDQR 199.33 1.07E-20 0 38436 35360 28114 29853 26191 26341 33709 26123 30352 35828 TRUE FALSE 41378.68971 33604.07382 29051.30673 27413.9144 25162.60974 27343.42521 29282.96781 29537.36579 32991.9621 34658.93529 1.193882309 0.969564516 0.8382054 0.790962393 0.726006426 0.788928598 0.844889422 0.852229462 0.951903508 1 15.08093972 -1.825952009 10.31739571 0.880013953 1.07245358 0 0.130305838 0 0 0.031533475 0 0.014929594 1.825952009 0.192439627 ETDVS(ph)PFPPR ddPTM_A459_MK2206_30min_R1 2 ETDVSPFPPR 10 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3 Q9H8V3-2 ECT2 Protein ECT2 1 ET(0.005)DVS(0.995)PFPPR;ET(0.015)DVS(0.985)PFPPR 95.618 0.022574 11741600 4295.9 4176.5 4002.2 2955.8 4284.6 4149.1 4217.1 3859.9 3181.9 3187.8 TRUE FALSE 3930.511146 3904.609091 3730.541815 3183.456228 4113.935309 4384.018456 3935.784954 3826.153301 3512.669892 3582.728731 1.097071936 1.089842236 1.041257124 0.888556312 1.148268713 1.223653474 1.098543945 1.067943902 0.980445397 1 11.8068431 -8.195676821 4.615462995 0.989940616 1.082686703 0.174183616 0.080224173 0.410352094 16.87549792 0.066813763 0.022820746 6.37E-09 8.195676821 0.092746087 ETDVS(ph)PFPPR ddPTM_A459_MK2206_30min_R2 4 ETDVSPFPPR 10 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3 Q9H8V3-2 ECT2 Protein ECT2 1 ET(0.003)DVS(0.997)PFPPR;ET(0.014)DVS(0.986)PFPPR;ET(0.005)DVS(0.995)PFPPR;ET(0.036)DVS(0.964)PFPPR 121.29 0.0048236 17613500 109176 129553 114771 136925 132088 141413 127774 97173 107320 119025 TRUE FALSE 117534.5985 123119.5864 118597.4079 125737.7895 126901.5614 146794.5708 110997.1203 109873.8447 116654.4996 115141.224 1.020786426 1.069291971 1.030016911 1.092031031 1.102138374 1.274908896 0.964008515 0.954252881 1.013142779 1 16.81304493 ETDYPAGEDLSES(ph)GQVDK ddPTM_A459_MK2206_30min_R1 2 ETDYPAGEDLSESGQVDK 18 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBS5;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 ETDYPAGEDLS(0.02)ES(0.98)GQVDK;ETDYPAGEDLS(0.001)ES(0.999)GQVDK 283.83 2.52E-67 33449000 4816.1 6640.8 7364.3 5091.4 5832.4 5153.7 6102.1 6151.7 6171.3 6329.6 TRUE FALSE 4406.465405 6208.482713 6864.431834 5483.54051 5600.083158 5445.49804 5695.040043 6097.916335 6812.828719 7113.758634 0.619428579 0.872742952 0.964951468 0.770835896 0.787218606 0.765488165 0.800566949 0.857200342 0.95769748 1 12.79639631 -8.228171678 2.09357831 0.998170831 0.804027574 0.434419345 0.082300735 0.326298159 2.584985733 0.078159877 0.023041954 5.91E-09 8.228171678 -0.194143258 ETDYPAGEDLSES(ph)GQVDK ddPTM_A459_MK2206_30min_R2 2 ETDYPAGEDLSESGQVDK 18 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBS5;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 ETDYPAGEDLS(0.001)ES(0.999)GQVDK;ETDYPAGEDLSES(1)GQVDK 205.02 4.13E-11 29911000 107817 137420 144397 138765 130066 103942 146651 115883 110346 130171 TRUE FALSE 116071.5524 130595.9226 149211.1239 127427.4556 124958.9553 107897.5856 127395.5475 131029.306 119943.6956 125923.5309 0.921762212 1.037104993 1.184934403 1.011943158 0.992339989 0.856850065 1.011689766 1.040546632 0.952512169 1 16.94218837 -6.122105273 4.120056546 0.973905 1.053199309 0.150083507 0.07513321 0.425259785 12.18167186 0.023700592 0.031467798 7.55E-07 6.122105273 0.079294308 ETEAAPT(ph)SPPIVPLK ddPTM_A459_MK2206_30min_R1 1 ETEAAPTSPPIVPLK 15 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 ETEAAPT(0.502)S(0.498)PPIVPLK 238.67 1.24E-19 36097000 9823.2 10121 9475.9 8394.4 10093 8663.3 8863.6 8401.6 7630.9 7064.7 TRUE FALSE 8987.685256 9462.12106 8832.702309 9040.938142 9690.974438 9153.808559 8272.325417 8328.145697 8424.159362 7939.928372 1.131960496 1.191713655 1.112441057 1.138667469 1.220536759 1.152883015 1.041863985 1.048894311 1.060986821 1 12.95491028 -7.252374488 6.136692483 1.041609974 1.159780937 0.769592689 0.032172404 0.077255102 13.42721475 0.013032698 0.009517435 5.59E-08 7.252374488 0.118170963 ETEAAPT(ph)SPPIVPLK ddPTM_A459_MK2206_30min_R2 1 ETEAAPTSPPIVPLK 15 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 ETEAAPT(0.592)S(0.408)PPIVPLK 115.83 0.005446 28699000 79200 95807 81860 91743 98431 91515 95804 64757 79418 82617 TRUE FALSE 85263.61289 91049.3637 84589.17154 84247.30343 94566.10436 94997.66745 83224.81972 73220.96224 86325.63409 79921.21406 1.066845817 1.139238996 1.058406989 1.054129425 1.18324159 1.188641446 1.041335779 0.916164289 1.080134168 1 16.28629088 -7.515121266 24.77096177 0.994639535 1.114021131 0.456953939 0.057790566 294.1478047 939274.6364 0.026528444 0.016177769 3.05E-08 7.515121266 0.119381597 ETEAAPTS(ph)PPIVPLK ddPTM_A459_MK2206_30min_R1 3 ETEAAPTSPPIVPLK 15 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 ETEAAPT(0.055)S(0.945)PPIVPLK;ETEAAPT(0.024)S(0.976)PPIVPLK;ETEAAPT(0.047)S(0.952)PPIVPLK 268.93 7.65E-45 41086400 10541.8 9885 9930.2 9040.2 9731.7 8697.2 9161.1 9294.6 8681.3 7811.8 TRUE FALSE 9645.164553 9241.484703 9256.165691 9736.47777 9344.065782 9189.627948 8549.979734 9213.338292 9583.752201 8779.58476 1.098590061 1.052610682 1.054282856 1.108990691 1.064294729 1.046704166 0.973847849 1.049404789 1.091595157 1 13.09993699 -6.795071086 3.579405089 1.030520002 1.07577312 0.310053422 0.033171527 0.318140916 8.513822299 0.012399209 0.011319622 1.60E-07 6.795071086 0.045253118 ETEAAPTS(ph)PPIVPLK ddPTM_A459_MK2206_30min_R2 3 ETEAAPTSPPIVPLK 15 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 ETEAAPT(0.016)S(0.984)PPIVPLK;ETEAAPT(0.061)S(0.939)PPIVPLK;ETEAAPT(0.003)S(0.997)PPIVPLK 209.22 1.45E-06 49946000 252574 272315 249602 280379 290706 255736 285581 223346 232828 274249 TRUE FALSE 271911.2596 258792.2331 257923.6061 257471.1388 279291.4218 265468.2127 248083.8717 252538.0891 253078.9586 265300.2776 1.024918866 0.975469138 0.97219501 0.970489519 1.052737013 1.000633 0.935105963 0.951895307 0.953934013 1 18.01726666 -7.244119739 23.99691294 0.956225097 0.998191746 0.309822736 0.02835719 588.9656677 816030.9076 0.011213471 0.008663252 5.70E-08 7.244119739 0.041966649 ETEEQDS(ph)DSAEQGDPAGEGK ddPTM_A459_MK2206_30min_R2 1 ETEEQDSDSAEQGDPAGEGK 20 0 H0Y626;O95361 H0Y626 TRIM16 Tripartite motif-containing protein 16 1 ET(0.001)EEQDS(0.988)DS(0.011)AEQGDPAGEGK 214.16 1.63E-17 31657000 222410 190050 206320 183180 192740 140700 215060 187740 156670 232040 TRUE FALSE 239437.8806 180612.3934 213198.6058 168213.608 185172.0592 146054.4371 186822.3637 212278.2626 170296.8734 224468.5538 1.066687857 0.804622252 0.949792754 0.749386073 0.824935413 0.650667698 0.832287465 0.945692655 0.758666951 1 17.77615382 -4.757997527 24.97715438 0.828153611 1.066688194 0.3208005 0.100626955 114.1269468 828075.663 0.024471421 0.173534522 1.75E-05 4.757997527 0.238534583 ETEEQDSDS(ph)AEQGDPAGEGK ddPTM_A459_MK2206_30min_R2 1 ETEEQDSDSAEQGDPAGEGK 20 0 H0Y626;O95361 H0Y626 TRIM16 Tripartite motif-containing protein 16 1 ETEEQDS(0.014)DS(0.986)AEQGDPAGEGK 241.36 2.29E-30 21967000 190600 172430 170360 163200 152100 134060 174780 156900 116520 187550 TRUE FALSE 205192.4825 163867.3769 176039.7174 149866.0379 146127.7898 139161.7472 151831.1761 177407.3687 126654.699 181430.2589 1.130971668 0.903197614 0.97028863 0.826025597 0.805421271 0.767026119 0.836856966 0.977826796 0.698090273 1 17.46905556 ETEPLVS(ph)PHQDK ddPTM_A459_MK2206_30min_R2 2 ETEPLVSPHQDK 12 0 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 ETEPLVS(1)PHQDK;ETEPLVS(1)PHQDK 95.195 0.01826 10859900 53794 55359 52510 57551 55453 45320 65487 50019 39112 55314 TRUE FALSE 57912.51 52609.95256 54260.65719 52848.8992 53275.63659 47044.68436 56888.47824 56556.65504 42513.89106 53509.10871 1.082292555 0.983196204 1.014045244 0.987661736 0.995636778 0.879190207 1.063155033 1.056953786 0.794516898 1 15.70749688 -1.522878847 0.720964446 0.970894428 15.59818265 0.153354344 0.076663526 677.814973 3.303189854 0.028972232 16036.50864 0.029999993 1.522878847 14.62728823 ETERAS(ph)PIK ddPTM_A459_MK2206_30min_R2 1 ETERASPIK 9 1 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ETERAS(1)PIK 123.67 0.02636 140650000 205700 170120 171770 146410 147430 114010 207690 157290 126680 177870 TRUE FALSE 221448.5502 161672.0882 177496.7261 134447.8347 141641.1574 118348.7304 180420.0535 177848.3431 137698.3974 172066.1165 1.286996852 0.939592823 1.03156118 0.781373099 0.823178673 0.687809622 1.048550739 1.033604679 0.800264458 1 17.3926035 -3.565767769 1.206744573 0.888440642 6.984373108 0.483007602 0.119184848 21.84706083 2.532543899 0.03677657 315.9477406 0.000271789 3.565767769 6.095932467 ETERAS(ph)PIKMDLAPSK ddPTM_A459_MK2206_30min_R1 2 ETERASPIKMDLAPSK 16 2 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ET(0.134)ERAS(0.866)PIKMDLAPSK;ET(0.011)ERAS(0.989)PIKMDLAPSK 76.704 0.032671 641920000 9451.7 9776.7 9588.3 9019.4 8039.9 7026.3 7698.8 8527.4 7126.5 4622.9 TRUE FALSE 8647.783282 9140.235053 8937.472911 9714.075751 7719.653758 7424.123034 7185.227099 8452.845841 7867.325177 5195.619753 1.664437294 1.759219398 1.720193805 1.869666414 1.485800371 1.428919626 1.382939368 1.62691772 1.514222663 1 12.34308013 -6.381595871 5.35082768 1.432459259 1.750266696 0.527144024 0.160411804 0.198620752 7.910997239 0.048381762 0.054919405 4.15E-07 6.381595871 0.317807437 ETERAS(ph)PIKMDLAPSK ddPTM_A459_MK2206_30min_R2 2 ETERASPIKMDLAPSK 16 2 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ET(0.016)ERAS(0.984)PIKMDLAPSK;ET(0.009)ERAS(0.991)PIKMDLAPSK 90.442 0.013976 181585000 482051 707867 652089 638182 766146 551545 810316 567646 592182 644082 TRUE FALSE 518957.1952 672715.3541 673829.3218 586040.4892 736063.2585 572534.4315 703920.5358 641839.2812 643688.9199 623065.6571 0.832909324 1.07968614 1.081474021 0.940575817 1.181357454 0.918899036 1.129769436 1.030131053 1.033099662 1 19.24902467 -4.755870556 24.99654294 1.045849526 0.832908985 0.410289536 0.075848383 165.3556065 742147.2924 0.017185812 0.146257423 1.75E-05 4.755870556 -0.212940541 ETES(ph)APGSPR ddPTM_A459_MK2206_30min_R1 2 ETESAPGSPR 10 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 ET(0.003)ES(0.997)APGSPR;ET(0.009)ES(0.984)APGS(0.007)PR 139.31 0.0015418 78044000 7163.4 4973.9 4757.3 4712.1 9157.4 8239.7 8529.7 4982.2 3433.6 3223.4 TRUE FALSE 6554.115213 4650.098206 4434.387731 5075.026758 8792.641367 8706.224693 7960.699276 4938.641151 3790.535007 3622.739127 1.809160136 1.283586271 1.224042796 1.400881096 2.427069976 2.403216016 2.197425483 1.363234 1.046317406 1 11.82286521 ETESAPGS(ph)PR ddPTM_A459_MK2206_30min_R1 4 ETESAPGSPR 10 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 ETES(0.005)APGS(0.995)PR;ETESAPGS(1)PR;ETESAPGS(1)PR;ETESAPGS(1)PR 130.69 0.0027371 353707700 16928.6 18317.4 16277.3 15879.1 18128.9 17246.9 19355.9 16289.2 15149.72 14384.4 TRUE FALSE 15488.73367 17124.93393 15172.44223 17102.11103 17406.78752 18223.40457 18064.70323 16146.78524 16724.58761 16166.44807 0.958078955 1.059288587 0.938514271 1.057876842 1.076723066 1.127236143 1.117419433 0.998783726 1.034524562 1 13.98071512 -4.757166723 24.71517088 1.048364171 0.958078801 0.190180985 0.053906705 203.2514724 1175531.905 0.01444644 0.109549077 1.75E-05 4.757166723 -0.090285369 ETESAPGS(ph)PR ddPTM_A459_MK2206_30min_R2 4 ETESAPGSPR 10 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 ETESAPGS(1)PR;ETES(0.001)APGS(0.999)PR;ETESAPGS(1)PR;ETES(0.039)APGS(0.961)PR 132.17 0.0024854 838639000 76223 81094 78297.9 94296 83658 96989 94637 82310 92216 86553 TRUE FALSE 82058.69149 77066.98988 80908.31291 86591.71516 80373.16657 100679.9844 82211.04822 93068.19961 100236.781 83728.7827 0.980053559 0.920436048 0.966314215 1.034192931 0.959922789 1.202453698 0.981873205 1.111543684 1.197160376 1 16.35343603 -6.356746464 1.299439323 1.097058201 0.953994818 0.36021995 0.07619317 0.462255353 1.595178594 0.03027184 0.039481415 4.40E-07 6.356746464 -0.143063383 ETFAS(ph)DTNEALASLDESQEGHAEAK ddPTM_A459_MK2206_30min_R1 2 ETFASDTNEALASLDESQEGHAEAK 25 0 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 1 ET(0.083)FAS(0.575)DT(0.305)NEALAS(0.036)LDES(0.002)QEGHAEAK;ET(0.024)FAS(0.703)DT(0.273)NEALASLDESQEGHAEAK 99.254 3.06E-06 8660800 1896.6 1961.1 2276.9 1757.79 1841.64 1808.51 2221.95 1683 2299.2 2653.2 TRUE FALSE 1735.284211 1833.432034 2122.350372 1893.17529 1768.283579 1910.906273 2073.72777 1668.285708 2538.210068 2981.898447 0.581939406 0.614853948 0.711744685 0.634889257 0.593005969 0.640835464 0.695438764 0.559471001 0.851206073 1 11.54201541 -8.471114771 3.785165862 0.998416187 0.633624663 0.877289008 0.045913025 0.061814492 1.88064219 0.044012911 0.011581624 3.38E-09 8.471114771 -0.364791524 ETFAS(ph)DTNEALASLDESQEGHAEAK ddPTM_A459_MK2206_30min_R2 2 ETFASDTNEALASLDESQEGHAEAK 25 0 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 1 ET(0.093)FAS(0.808)DT(0.093)NEALAS(0.004)LDES(0.001)QEGHAEAK;ET(0.075)FAS(0.838)DT(0.088)NEALASLDESQEGHAEAK 84.971 6.78E-05 10421600 52365 45700 47533 49267 46100 43044 56541 44186 37368 55523 TRUE FALSE 56374.10466 43430.60445 49117.7265 45241.7285 44289.88237 44682.06958 49117.09878 49961.26191 40618.20109 53711.28906 1.049576461 0.808593598 0.914476777 0.842313214 0.824591685 0.83189345 0.91446509 0.93018177 0.756232103 1 15.71293773 -4.750074916 24.99819873 0.866442659 1.049576861 0.390848478 0.067478843 502.7196894 1105752.939 0.015729321 0.240397864 1.78E-05 4.750074916 0.183134201 ETFASDTNEALASLDES(ph)QEGHAEAK ddPTM_A459_MK2206_30min_R1 1 ETFASDTNEALASLDESQEGHAEAK 25 0 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 1 ETFASDTNEALASLDES(1)QEGHAEAK 153.16 1.51E-10 10539000 3176.1 2806.9 2741.3 2280.9 2520.2 2539.7 3075.8 2662.7 2419.4 2954.8 TRUE FALSE 2905.956017 2624.1703 2555.228194 2456.575313 2419.815097 2683.495619 2870.618994 2639.420295 2670.905288 3320.862932 0.875060512 0.790207351 0.769447052 0.739740051 0.728670574 0.80807178 0.864419596 0.794799529 0.804280497 1 11.69734246 -10.46242012 0.450334906 1.071019542 0.785751945 0.658899453 0.043935474 10.26350936 1.426481592 1.014549865 0.02632295 3.45E-11 10.46242012 -0.285267597 ETFASDTNEALASLDES(ph)QEGHAEAK ddPTM_A459_MK2206_30min_R2 1 ETFASDTNEALASLDESQEGHAEAK 25 0 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 1 ETFASDTNEALAS(0.019)LDES(0.981)QEGHAEAK 76.259 0.0025218 0 8376 9654.1 6379.3 8578.5 7282.3 6694.8 10474 7198.6 5570.1 7572.9 TRUE FALSE 9017.273 9174.691432 6591.982678 7877.609109 6996.360311 6949.575305 9098.751218 8139.481736 6054.57723 7325.796893 1.230893121 1.252381354 0.899831482 1.075324531 0.955030615 0.948644278 1.242015217 1.111071172 0.826473532 1 12.83876999 -5.242923445 24.6012012 1.018116369 1.241637309 0.415809993 0.110511368 688.240838 914427.1015 0.028679691 0.075555733 5.72E-06 5.242923445 0.22352094 ETFLTSPEELYR ddPTM_A459_MK2206_30min_R2 1 ETFLTSPEELYR 12 0 O95433-2;O95433;H0YJ63;G3V438;H0YJG7 O95433-2 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 0 124.1 0.043409 3485800 10325 10096 5939.7 9666.9 9361.7 8822.7 10359 6619.2 7424.4 11017 FALSE TRUE 11115.48994 9594.647321 6137.726633 8877.083347 8994.112619 9158.454031 8998.850857 7484.352167 8070.160892 10657.51619 1.042971902 0.90027049 0.575905917 0.832941108 0.843922022 0.859342258 0.844366614 0.702260455 0.757227176 1 13.37958363 -4.998428001 9.75139184 0.793567619 1.00815014 0.327345765 0.105762266 0.101639186 188.6957821 0.025976062 0.089117008 1.00E-05 4.998428001 0.214582521 ETFS(ph)SAEGTVDKDTTIMELR ddPTM_A459_MK2206_30min_R1 2 ETFSSAEGTVDKDTTIMELR 20 1 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 ET(0.004)FS(0.577)S(0.419)AEGTVDKDTTIMELR;ET(0.033)FS(0.841)S(0.125)AEGTVDKDTTIMELR 142.58 2.69E-05 54476000 7148.3 7576.4 7044 6299.5 7582.2 6732.2 7343.3 6828 6789.2 5904.7 TRUE FALSE 6540.299548 7083.174983 6565.872906 6784.688582 7280.184918 7113.371346 6853.441856 6768.303516 7494.961635 6636.218814 0.985546096 1.067351029 0.9893997 1.022372645 1.097038106 1.071901266 1.032732953 1.019903609 1.129402427 1 12.69614574 -6.036353847 23.28946464 1.058949278 1.01716782 0.206990241 0.040692005 416.6193481 266899.0037 0.011618558 0.015007028 9.20E-07 6.036353847 -0.041781457 ETFS(ph)SAEGTVDKDTTIMELR ddPTM_A459_MK2206_30min_R2 1 ETFSSAEGTVDKDTTIMELR 20 1 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 ET(0.02)FS(0.785)S(0.191)AEGT(0.004)VDKDTTIMELR 60.542 0.015986 5637900 7576.9 8493 8149.5 9518.7 10131 6664.9 9051.1 5866.9 6890.4 7304.1 TRUE FALSE 8156.99329 8071.24997 8421.200263 8740.991761 9733.206036 6918.53744 7862.679698 6633.723974 7489.714537 7065.767815 1.154438343 1.142303311 1.191830879 1.237090149 1.377515691 0.979162863 1.112784895 0.938853943 1.060000092 1 12.78663063 -6.786545609 24.99997832 1.020252703 1.215597814 0.649521012 0.07431232 154.9381678 154281.3058 0.027031442 0.023848424 1.63E-07 6.786545609 0.195345111 ETGEHLVHVK ddPTM_A459_MK2206_30min_R1 2 ETGEHLVHVK 10 0 P21333-2;P21333;Q60FE5 P21333-2 FLNA Filamin-A 0 ; 111.06 0.0051208 21274500 15308.7 15671.1 15487.4 13522.9 16103.4 14732.9 16161.7 14268.9 13418.1 12595.5 FALSE TRUE 14006.61468 14650.90854 14436.15844 14564.4361 15461.96748 15567.06407 15083.58248 14144.14851 14812.95951 14155.92563 0.989452406 1.034966481 1.019796149 1.028857913 1.092261141 1.099685352 1.065531345 0.999168043 1.046414053 1 13.78911847 -4.785992301 1.011319578 1.050963019 0.966314611 0.196325773 0.032705605 3.269773356 2.68749248 0.011734235 0.30215653 1.64E-05 4.785992301 -0.084648408 ETGEHLVHVK ddPTM_A459_MK2206_30min_R2 4 ETGEHLVHVK 10 0 P21333-2;P21333;Q60FE5 P21333-2 FLNA Filamin-A 0 ;;; 111.06 0.0051208 39806500 313673 361503 341248 384917 363591 359438 410863 296007 323782 369928 FALSE TRUE 337688.0461 343551.2867 352625.038 353468.0498 349314.5904 373116.665 356916.1946 334696.1312 351943.9731 357857.2797 0.94363889 0.960023189 0.985378971 0.987734692 0.976128223 1.042640981 0.997370222 0.935278253 0.983475796 1 18.4490248 -5.080148648 1.98124918 0.988498336 0.941162529 0.271001071 0.024818062 0.662200211 4.205219746 0.007439367 0.045791022 8.31E-06 5.080148648 -0.047335806 ETGTDGILAGSQEHDPGQGS(ph)SSPEQAGSPTEGEGVSTWESFKR ddPTM_A459_MK2206_30min_R1 1 ETGTDGILAGSQEHDPGQGSSSPEQAGSPTEGEGVSTWESFKR 43 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 ETGTDGILAGS(0.036)QEHDPGQGS(0.283)S(0.283)S(0.283)PEQAGS(0.106)PT(0.008)EGEGVSTWESFKR 53.018 0.00037513 5465800 1309.6 1238.2 1361.2 844.05 1449.9 1340.4 1834.3 1436.7 1330.4 1504 TRUE FALSE 1198.211643 1157.592955 1268.805537 909.0588772 1392.147413 1416.29229 1711.937194 1424.139083 1468.699841 1690.326875 0.708863866 0.684833787 0.750627323 0.537800641 0.823596568 0.837880715 1.012784698 0.84252289 0.868885103 1 10.72308655 -6.590142587 2.760437445 0.911670075 0.677293531 0.686440058 0.076393164 0.158792291 2.456490388 0.026308592 0.026943353 2.57E-07 6.590142587 -0.234376544 ETHQQVVSR ddPTM_A459_MK2206_30min_R2 3 ETHQQVVSR 9 0 J3QRP6;O14745 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 0 ;; 128.91 0.0059172 4473890 30353.2 26079.4 26100.7 26634.7 30840.5 29081.5 31100 29896.3 28385.4 30705.9 FALSE TRUE 32677.06433 24784.33492 26970.88431 24458.55981 29629.54701 30188.21686 27016.53264 33803.84906 30854.31078 29703.969 1.100090844 0.834377888 0.907989243 0.823410495 0.997494544 1.016302463 0.909526018 1.138024655 1.038726871 1 14.85836809 -7.089945004 1.119208066 1.050286117 0.916550292 0.209020381 0.089216123 0.688901482 1.740995671 0.055661651 0.036787861 8.13E-08 7.089945004 -0.133735825 ETHVMDYR ddPTM_A459_MK2206_30min_R1 1 ETHVMDYR 8 0 H0YM70;A0A087X1Z3;Q9UL46 H0YM70 PSME2 Proteasome activator complex subunit 2 0 120.87 0.01008 9576600 4866 5609.2 5368.9 4383.4 5729.2 5435 5047.5 5208.4 5075.6 4458.9 FALSE TRUE 4452.121148 5244.04006 5004.474027 4721.010228 5500.993832 5742.725003 4710.790485 5162.863508 5603.226783 5011.302195 0.888416019 1.046442592 0.998637446 0.942072548 1.097717443 1.14595464 0.940033209 1.030243898 1.118117919 1 12.29096982 -4.076775297 1.750768252 1.036612231 2.60E-22 0.296433352 0.066559936 13.77205922 6.695236513 0.018671186 43.55056399 8.38E-05 4.076775297 -1.036612231 ETHVMDYR ddPTM_A459_MK2206_30min_R2 1 ETHVMDYR 8 0 H0YM70;A0A087X1Z3;Q9UL46 H0YM70 PSME2 Proteasome activator complex subunit 2 0 145.16 0.0028552 7506400 58131 65803 62834 73349 65130 76323 61010 62456 50998 58921 FALSE TRUE 62581.55406 62535.31871 64928.8542 67356.15207 62572.66895 79227.52525 52999.31371 70619.21364 55433.71386 56998.4126 1.097952578 1.097141409 1.139134429 1.181719788 1.097796695 1.389995294 0.929838417 1.238968077 0.97254838 1 15.79863412 -8.281459158 24.09357105 0.986274093 1.14510887 0.249461075 0.111191805 798.1482803 960548.2014 0.099680363 0.02588978 5.23E-09 8.281459158 0.158834778 ETIELSPT(ph)GRPK ddPTM_A459_MK2206_30min_R2 1 ETIELSPTGRPK 12 1 A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;Q9NRZ9-4 A0A087WSW7 HELLS Lymphoid-specific helicase 1 ETIELS(0.106)PT(0.894)GRPK 87.863 0.038672 20374000 41336 47832 48169 44092 47632 37158 52372 38646 38786 55983 TRUE FALSE 44500.71594 45456.73243 49774.93042 40489.54256 45761.72835 38572.07373 45495.49349 43697.16489 42159.53617 54156.27929 0.821709256 0.839362176 0.919098045 0.74764262 0.84499395 0.712236406 0.840077902 0.806871622 0.778479185 1 15.724841 -10.87630962 3.327453444 1.001314232 0.812991065 0.518590816 0.054257214 23120898.67 30953420.56 294265.3796 0.013660193 1.33E-11 10.87630962 -0.188323167 ETIEQEKR ddPTM_A459_MK2206_30min_R2 1 ETIEQEKR 8 1 P63313 P63313 TMSB10 Thymosin beta-10 0 93.143 0.033116 47869000 62896 88774 75081 79041 66700 52870 60868 71757 62508 60135 FALSE TRUE 67711.36612 84365.61225 77584.16307 72583.09746 64081.02286 54882.0049 52875.95848 81135.88628 67944.83285 58172.79987 1.163969523 1.450258754 1.333684527 1.247715386 1.101563325 0.943430693 0.908946425 1.394739233 1.167982854 1 15.82805712 -6.123841815 3.020611392 1.089318677 1.326477481 0.354341741 0.14260687 0.318310174 5.546929751 0.047380394 0.064590602 7.52E-07 6.123841815 0.237158805 ETIQGTGSWGPEPPGPGIPPAYS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 ETIQGTGSWGPEPPGPGIPPAYSSPR 26 0 Q9H4L4 Q9H4L4 SENP3 Sentrin-specific protease 3 1 ETIQGTGSWGPEPPGPGIPPAY(0.004)S(0.697)S(0.299)PR 73.968 0.00015495 4670300 1083.1 895.03 818.17 733.86 1190.9 941.84 1071.6 897.79 949.22 904.09 TRUE FALSE 990.9766574 836.7633843 762.6349 790.3820244 1143.463931 995.1661669 1000.115519 889.9407167 1047.894816 1016.095495 0.975279058 0.823508606 0.750554356 0.777861951 1.125350853 0.979402204 0.984273156 0.875843581 1.031295603 1 9.988820281 -6.24138808 24.99783548 0.991400766 0.825405341 0.512868495 0.079677596 719.6463039 897178.7476 0.024388916 0.031445328 5.74E-07 6.24138808 -0.165995425 ETIQGTGSWGPEPPGPGIPPAYS(ph)SPR ddPTM_A459_MK2206_30min_R2 1 ETIQGTGSWGPEPPGPGIPPAYSSPR 26 0 Q9H4L4 Q9H4L4 SENP3 Sentrin-specific protease 3 1 ETIQGTGSWGPEPPGPGIPPAY(0.056)S(0.708)S(0.235)PR 81.133 0.0011657 0 5886.7 3773.9 6752.5 7227.1 6485.3 9262.1 5701.7 3698.2 4166.5 8713.7 TRUE FALSE 6337.390278 3586.493614 6977.62498 6636.622812 6230.654536 9614.575706 4953.059941 4181.567438 4528.894639 8429.372683 0.751822291 0.425475744 0.82777512 0.787321081 0.739159932 1.140603941 0.58759532 0.496071012 0.537275407 1 13.04120955 -4.43702916 22.29465378 0.717048768 3.604531401 0 0.214492532 10501.85727 2406214.337 0.053334634 181052.2428 3.66E-05 4.43702916 2.887482633 ETIQGTGSWGPEPPGPGIPPAYS(ph)SPRR ddPTM_A459_MK2206_30min_R2 2 ETIQGTGSWGPEPPGPGIPPAYSSPRR 27 1 Q9H4L4 Q9H4L4 SENP3 Sentrin-specific protease 3 1 ETIQGTGSWGPEPPGPGIPPAY(0.296)S(0.352)S(0.352)PRR;ETIQGTGSWGPEPPGPGIPPAY(0.434)S(0.508)S(0.058)PRR 71.524 0.0002522 12521800 4887.6 7439.5 5367.4 10583.9 10895.7 13160.7 6833.5 10161.4 13212.4 10093.6 TRUE FALSE 5261.798414 7070.065248 5546.346437 9719.161514 10467.88007 13661.53966 5936.253241 11489.52987 14361.59067 9764.246659 0.538884217 0.724076879 0.568026048 0.995382629 1.072062232 1.399139139 0.60795814 1.17669394 1.470834481 1 13.25329302 -5.871471999 3.629676306 1.113345836 0.619666359 0.506423226 0.225092094 0.200999655 5.074347452 0.066143072 0.10398103 1.34E-06 5.871471999 -0.493679477 ETIQGTGSWGPEPPGPGIPPAYSS(ph)PRR ddPTM_A459_MK2206_30min_R1 2 ETIQGTGSWGPEPPGPGIPPAYSSPRR 27 1 Q9H4L4 Q9H4L4 SENP3 Sentrin-specific protease 3 1 ETIQGTGSWGPEPPGPGIPPAY(0.012)S(0.233)S(0.755)PRR;ETIQGTGSWGPEPPGPGIPPAY(0.003)S(0.247)S(0.75)PRR 154.41 4.86E-15 26738000 1340.63 1548.35 1435.56 1370.92 1498.09 1221.65 1213.4 1191.47 1231.24 867.99 TRUE FALSE 1226.602379 1447.552134 1338.118187 1476.508496 1438.417903 1290.818767 1132.4563 1181.053103 1359.231804 975.5231542 1.257379052 1.483872656 1.371692903 1.513555562 1.474509238 1.323206693 1.160870754 1.2106869 1.393336281 1 9.930032306 -7.013576774 4.223714209 1.210493837 1.42539981 0.477733642 0.111918085 0.193438719 8.182762512 0.041476031 0.033754754 9.69E-08 7.013576774 0.214905973 ETLNLLLPEIMPGLIQGYDNS(ph)ES(ph)S(ph)VRK ddPTM_A459_MK2206_30min_R2 1 ETLNLLLPEIMPGLIQGYDNSESSVRK 27 1 E3W994;J3KR49;O75122;A0A0U1RQI6;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 3 ETLNLLLPEIMPGLIQGY(0.248)DNS(0.888)ES(0.888)S(0.976)VRK 43.888 0.041702 16369000 18083 15219 23335 11686 13354 4200.6 20895 16047 7182.2 19759 TRUE FALSE 19467.44838 14463.24659 24112.97725 10731.21642 12829.65486 4360.456777 18151.4614 18144.398 7806.894774 19114.26545 1.018477453 0.756672896 1.261517337 0.561424474 0.671208365 0.228125783 0.949629032 0.949259497 0.408432895 1 14.22236214 -5.781638546 24.99934332 0.670935931 0.986667765 0.253509681 0.258814721 336.5726737 416555.45 0.072788333 0.108112135 1.65E-06 5.781638546 0.315731834 ETMQS(ph)LNDR ddPTM_A459_MK2206_30min_R1 1 ETMQSLNDR 9 0 P05783;F8VZY9;CON__Q92764;C4AM86;CON__Q497I4;Q92764 P05783 KRT18;KRT35 "Keratin, type I cytoskeletal 18;Keratin, type I cuticular Ha5" 1 ET(0.004)MQS(0.996)LNDR 82.505 0.04117 4797800 1703.4 1535.4 1585.7 1193.7 1448.3 1604.8 1925.6 1135.8 1281.4 1435.7 TRUE FALSE 1558.516885 1435.445181 1478.067102 1285.638981 1390.611144 1695.662389 1797.146737 1125.86982 1414.606116 1613.565355 0.965883954 0.889610809 0.916025556 0.796769078 0.861825113 1.050879274 1.113773751 0.697752847 0.87669589 1 10.6560363 -4.749340885 23.10281865 0.90771946 0.965884292 0.018946499 0.114599493 1214.282695 2318355.142 0.029881843 0.449157338 1.78E-05 4.749340885 0.058164832 ETMQS(ph)LNDR ddPTM_A459_MK2206_30min_R2 1 ETMQSLNDR 9 0 P05783;F8VZY9;CON__Q92764;C4AM86;CON__Q497I4;Q92764 P05783 KRT18;KRT35 "Keratin, type I cytoskeletal 18;Keratin, type I cuticular Ha5" 1 ETMQS(1)LNDR 137.01 0.0025907 20565000 26201 35083 23763 34919 25618 25991 34075 34268 21806 30835 TRUE FALSE 28206.96871 33340.82924 24555.24656 32066.006 24612.1086 26980.10572 29600.91157 38746.94526 23702.64646 29828.85648 0.945626887 1.117737425 0.823204422 1.074999507 0.825110698 0.904496816 0.992358242 1.298975215 0.794621359 1 14.86442105 -7.530474958 24.99934843 1.057212274 0.950476412 0.053865802 0.14429524 438.85161 1444249.421 0.064049359 0.037067095 2.95E-08 7.530474958 -0.106735862 ETMQSLNDR ddPTM_A459_MK2206_30min_R1 2 ETMQSLNDR 9 0 P05783;F8VZY9;CON__Q92764;C4AM86;CON__Q497I4;Q92764 P05783 KRT18;KRT35 "Keratin, type I cytoskeletal 18;Keratin, type I cuticular Ha5" 0 ; 200.56 0.02869 99585000 6122.1 6107.8 6267.5 4258.9 6246.2 5700.4 6864.5 5875.1 5575.8 5993.8 FALSE TRUE 5601.383247 5710.18111 5842.079562 4586.921216 5997.400627 6023.151722 6406.58173 5823.73462 6155.424363 6736.357195 0.831515177 0.847666023 0.867246108 0.68092013 0.890303239 0.894125942 0.951045431 0.864522835 0.913761575 1 12.71775292 -6.502410521 24.86492498 0.915020286 0.810511108 0.478849619 0.057742405 692.2301564 840926.7672 0.017841557 0.019991547 3.14E-07 6.502410521 -0.104509177 ETMQSLNDR ddPTM_A459_MK2206_30min_R2 6 ETMQSLNDR 9 0 P05783;F8VZY9;CON__Q92764;C4AM86;CON__Q497I4;Q92764 P05783 KRT18;KRT35 "Keratin, type I cytoskeletal 18;Keratin, type I cuticular Ha5" 0 ;;;;; 260.23 1.39E-17 753920000 730117 881891 850925 1011265 818215 885876 873542 805051 690525 857941 FALSE TRUE 786015.3189 838097.5753 879294.4148 928641.4146 786087.7679 919588.6319 758844.8861 910273.9299 750585.6163 829946.4554 0.947067505 1.00982126 1.059459209 1.118917261 0.947154799 1.10800959 0.914329932 1.096786333 0.904378362 1 19.66265874 -8.273040235 24.98317203 0.952189193 1.025410992 0.14268162 0.071578768 1571.230218 3383703.801 0.062524963 0.016727051 5.33E-09 8.273040235 0.073221799 ETNLDS(ph)LPLVDTHSK ddPTM_A459_MK2206_30min_R1 8 ETNLDSLPLVDTHSK 15 0 P08670 P08670 VIM Vimentin 1 ET(0.003)NLDS(0.996)LPLVDTHSK;ET(0.017)NLDS(0.982)LPLVDTHSK;ETNLDS(1)LPLVDTHSK;ET(0.015)NLDS(0.985)LPLVDTHSK;ET(0.012)NLDS(0.988)LPLVDTHSK;ET(0.001)NLDS(0.999)LPLVDTHSK;ETNLDS(0.999)LPLVDT(0.001)HSK;ET(0.007)NLDS(0.778)LPLVDT(0.214)HS(0.001)K 178.54 5.13E-06 587765600 76942.7 45761.4 46754 38980.1 43024.3 38539.92 45825.6 43200.7 47331.7 49387.87 TRUE FALSE 70398.31932 42782.32454 43580.46874 41982.35406 41310.55103 40722.01696 42768.65784 42823.00083 52251.99959 55506.41219 1.268291654 0.770763644 0.78514296 0.756351427 0.744248266 0.733645274 0.770517426 0.771496466 0.941368709 1 15.76036682 -4.759797979 24.99543076 0.79318761 1.268292243 0.719272162 0.085777777 20.48759273 311891.0085 0.020151449 0.124778549 1.74E-05 4.759797979 0.475104633 ETNLDS(ph)LPLVDTHSK ddPTM_A459_MK2206_30min_R2 10 ETNLDSLPLVDTHSK 15 0 P08670 P08670 VIM Vimentin 1 ET(0.002)NLDS(0.998)LPLVDTHSK;ET(0.025)NLDS(0.975)LPLVDTHSK;ET(0.008)NLDS(0.992)LPLVDTHSK;ETNLDS(1)LPLVDTHSK;ETNLDS(1)LPLVDTHSK;ET(0.043)NLDS(0.957)LPLVDTHSK;ET(0.001)NLDS(0.999)LPLVDTHSK;ET(0.009)NLDS(0.991)LPLVDTHSK;ET(0.038)NLDS(0.962)LPLVDTHSK;ET(0.001)NLDS(0.996)LPLVDT(0.004)HSK 179.69 1.32E-05 314359600 761336 417152.3 429114.7 458303.3 445909.6 375583.2 467819.3 340356.5 348827.1 462021.1 TRUE FALSE 819624.4695 396437.1234 443421.1699 420858.4544 428400.9486 389876.2819 406394.064 384842.2632 379167.4506 446945.3893 1.833835831 0.88699231 0.992114877 0.941632836 0.958508486 0.872313019 0.909270067 0.861049856 0.848352975 1 18.76973904 -4.760299826 24.99999829 0.917049711 1.833836923 0.967061223 0.050655022 4.616503592 101234.4621 0.012971582 0.077624934 1.74E-05 4.760299826 0.916787213 ETNLDS(ph)LPLVDTHSKR ddPTM_A459_MK2206_30min_R1 1 ETNLDSLPLVDTHSKR 16 1 P08670 P08670 VIM Vimentin 1 ET(0.005)NLDS(0.995)LPLVDTHSKR 66.702 0.036016 60954000 14565 7144.6 7287.9 7757.7 9839.2 5943.9 6757.4 9124.8 4130.4 2755.1 TRUE FALSE 13326.17027 6679.485241 6793.217653 8355.199398 9447.283829 6280.438481 6306.626176 9045.022836 4559.769861 3096.422588 4.303731124 2.157162032 2.193892294 2.698339507 3.051031815 2.02828855 2.036745953 2.921120286 1.472592881 1 11.59638666 -2.247462063 0.077780682 3.42E-26 7.83982918 0.49249098 0.620987049 180.6495077 1.188074269 21.18981687 154.9447565 0.005656372 2.247462063 7.83982918 ETNLDSLPLVDT(ph)HSK ddPTM_A459_MK2206_30min_R2 1 ETNLDSLPLVDTHSK 15 0 P08670 P08670 VIM Vimentin 1 ET(0.064)NLDS(0.017)LPLVDT(0.919)HSK 201.04 3.99E-05 21101000 123190 67056 65096 65411 72703 59975 86442 47116 56702 63183 TRUE FALSE 132621.5211 63726.09655 67266.26815 60066.71206 69848.31492 62257.39065 75092.06156 53274.22297 61633.83747 61121.34388 2.169807021 1.04261609 1.100536472 0.982745278 1.142781072 1.018586744 1.22857347 0.871614065 1.008384855 1 15.89938864 -4.761276119 24.99697243 1.047885902 2.169808258 0.931041159 0.091912922 0.87605596 133735.615 0.0222273 0.12488072 1.73E-05 4.761276119 1.121922356 ETNLDSLPLVDTHS(ph)KR ddPTM_A459_MK2206_30min_R2 2 ETNLDSLPLVDTHSKR 16 1 P08670 P08670 VIM Vimentin 1 ETNLDS(0.038)LPLVDT(0.001)HS(0.961)KR;ETNLDSLPLVDT(0.002)HS(0.998)KR 118.23 0.00091334 21808900 32076 42543 32297 40928 46045 34376 41290 33108 43160 32774 TRUE FALSE 34531.76322 40430.37648 33373.76586 37584.05148 44237.04194 35684.20277 35868.5734 37435.32928 46913.97878 31704.58706 1.089172464 1.275221671 1.052647864 1.185445229 1.395288381 1.125521764 1.131337031 1.180754356 1.47972212 1 14.95240397 -6.000634614 24.9978778 1.225282623 1.147036729 0.059738305 0.139227639 74.35159445 2929105.699 0.038566345 0.056450392 9.99E-07 6.000634614 -0.078245894 ETNLDSLPLVDTHSK ddPTM_A459_MK2206_30min_R1 2 ETNLDSLPLVDTHSK 15 0 P08670 P08670 VIM Vimentin 0 ; 195.6 4.75E-05 18351300 11267.6 11538.4 11600.2 9884 10798.7 11931 12571.1 10040.1 10266.4 10902.1 FALSE TRUE 10309.23145 10787.24806 10812.81074 10645.26739 10368.56491 12606.52291 11732.50486 9952.320464 11333.62902 12252.73445 0.8413821 0.880395156 0.88248144 0.868807484 0.846224567 1.028874245 0.957541755 0.812253012 0.924987729 1 13.58081613 ETNLDSLPLVDTHSK ddPTM_A459_MK2206_30min_R2 3 ETNLDSLPLVDTHSK 15 0 P08670 P08670 VIM Vimentin 0 ;; 215.37 1.70E-07 42073700 272006 332449 292869 310900 311864 283070 331453 262748 290013 276061 FALSE TRUE 292830.9885 315940.0661 302633.1063 285498.4755 299618.6524 293842.4272 287932.823 297090.0657 315237.8065 267053.1522 1.096526988 1.183060614 1.133231732 1.069069858 1.12194389 1.100314394 1.07818545 1.112475413 1.180430951 1 18.02676739 -11.96233078 2.109031172 1.45E-05 1.118352921 0.493865236 0.036267892 525986.3813 87305.48721 2531337.19 0.009374336 1.09E-12 11.96233078 1.118338376 ETNLDSLPLVDTHSKR ddPTM_A459_MK2206_30min_R1 2 ETNLDSLPLVDTHSKR 16 1 P08670 P08670 VIM Vimentin 0 ; 108.06 0.002166 26743000 13748.9 12971.5 14394.3 15529.9 18679.7 13884.1 12468.1 17367.8 7371.3 4556 FALSE TRUE 12579.48386 12127.05299 13417.25502 16726.01559 17935.64799 14670.20574 11636.3758 17215.95516 8137.573013 5120.431676 2.45672331 2.368365357 2.620336696 3.266524513 3.502760925 2.865033003 2.272538047 3.362207768 1.589235738 1 12.32204973 -8.440297786 4.410664961 1.011959316 2.830537029 0.705309362 0.407156097 0.113985734 3.772976207 0.4198412 0.109771945 3.63E-09 8.440297786 1.818577713 ETNLDSLPLVDTHSKR ddPTM_A459_MK2206_30min_R2 2 ETNLDSLPLVDTHSKR 16 1 P08670 P08670 VIM Vimentin 0 ; 97.223 0.0052214 11304700 26975.1 78877 51233 71754 88557 83208 69120 36345 89192 47014 FALSE TRUE 29040.3344 74960.08288 52941.08265 65891.46867 85079.80722 86374.53875 60044.46097 41095.41629 96949.75894 45479.93703 0.638530664 1.648201114 1.164053561 1.448802988 1.870710752 1.899178943 1.320240636 0.903594397 2.131703896 1 15.47294264 -4.75499166 24.80336951 1.49268877 0.638529077 0.306016164 0.383418746 248.5248133 955937.4341 0.093944398 0.864985852 1.76E-05 4.75499166 -0.854159693 ETPAAQS(ph)PTR ddPTM_A459_MK2206_30min_R1 1 ETPAAQSPTR 10 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 ETPAAQS(0.698)PT(0.301)R 106.79 0.011689 6348100 2474.4 2344.4 2649 2088.6 2550.3 2597.2 2725.4 2099.8 2553.1 3023.5 TRUE FALSE 2263.939286 2191.779134 2469.193261 2249.464334 2448.716151 2744.25122 2543.593539 2081.44167 2818.503881 3398.074006 0.666241901 0.645006298 0.726644934 0.661982149 0.720618841 0.807590186 0.748539771 0.612535709 0.829441583 1 11.73050156 -14.52287875 0.188755276 2.245498328 0.657661878 0.703806473 0.059008539 78.18206528 0.76113389 36.51006004 0.166955954 3.00E-15 14.52287875 -1.58783645 ETPAAQS(ph)PTR ddPTM_A459_MK2206_30min_R2 1 ETPAAQSPTR 10 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 ET(0.03)PAAQS(0.651)PT(0.319)R 87.719 0.033258 14577000 31261 32871 25496 36646 30952 20157 34164 28591 25730 38324 TRUE FALSE 33654.3662 31238.67394 26346.02391 33651.90458 29736.66896 20924.08876 29678.22576 32327.94187 27967.94889 37073.49102 0.907774404 0.842614846 0.71064319 0.907708005 0.802100588 0.564394887 0.800524174 0.871996162 0.754392104 1 15.17810035 -11.15822113 2.550322667 1.024222633 0.793718436 0.281537804 0.097813381 16377031.66 13805436.87 2611537.338 0.025250534 6.95E-12 11.15822113 -0.230504197 ETPAAQS(ph)PTRGPSDTK ddPTM_A459_MK2206_30min_R1 4 ETPAAQSPTRGPSDTK 16 1 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 ETPAAQS(0.495)PT(0.495)RGPS(0.01)DTK;ETPAAQS(0.945)PT(0.053)RGPS(0.002)DTK;ETPAAQS(0.607)PT(0.167)RGPS(0.225)DTK;ETPAAQS(0.916)PT(0.056)RGPS(0.028)DTK 191.61 5.08E-06 18913300 6130.29 4745.91 4894.91 4441.32 4718.86 4222 4554.65 4381.93 3401.28 3543.53 TRUE FALSE 5608.876644 4436.950396 4562.657147 4783.391236 4530.897814 4461.045991 4250.817609 4343.619248 3754.855228 3982.529249 1.408370484 1.114103656 1.145668208 1.201093812 1.137693544 1.120153981 1.067366325 1.090668512 0.942831802 1 11.95946924 -1.522878745 0.204437825 0.978576087 2.568650105 0.677667179 0.067195891 33.55608921 0.410998108 0.119616226 17.20465598 0.03 1.522878745 1.590074018 ETPAAQS(ph)PTRGPSDTK ddPTM_A459_MK2206_30min_R2 2 ETPAAQSPTRGPSDTK 16 1 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 ETPAAQS(0.904)PT(0.093)RGPS(0.002)DTK;ETPAAQS(0.487)PT(0.487)RGPS(0.023)DT(0.003)K 200.9 3.12E-06 14779900 28041 36264 33259 35165 38114 32983 37787 25749 30824 30818 TRUE FALSE 30187.84052 34463.18249 34367.83846 32291.90701 36617.45285 34238.19118 32825.52151 29114.48271 33505.0158 29812.41118 1.012593055 1.15600118 1.152803047 1.083169919 1.228262036 1.148454279 1.101068991 0.976589332 1.123861321 1 14.86362544 -7.556240952 8.444291746 1.037560448 1.133939024 0.318171885 0.063111623 0.298462219 66.77670283 0.028886528 0.016721716 2.78E-08 7.556240952 0.096378576 ETPAATEAPSS(ph)TPK ddPTM_A459_MK2206_30min_R2 3 ETPAATEAPSSTPK 14 0 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 ETPAATEAPSS(0.5)T(0.5)PK;ETPAATEAPSS(0.5)T(0.5)PK;ETPAAT(0.001)EAPS(0.059)S(0.643)T(0.297)PK 172.33 0.00012452 81059900 320258 225655 232184 200623 190847 159747 329584 212195 230452 262151 TRUE FALSE 344777.1987 214449.3008 239924.8987 184231.4591 183353.3879 165826.284 286309.2249 239929.6151 250496.2984 253597.0343 1.35954744 0.84563016 0.946087163 0.72647324 0.723010773 0.653896779 1.128992796 0.946105761 0.98777298 1 17.95217835 -9.965613556 18.76327764 1 0.909492622 0.008083129 0.199302881 0 0 0.196952457 0.047767987 1.08E-10 9.965613556 -0.090507378 ETPAATEAPSST(ph)PK ddPTM_A459_MK2206_30min_R1 5 ETPAATEAPSSTPK 14 0 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 ETPAATEAPSS(0.056)T(0.944)PK;ETPAATEAPSS(0.021)T(0.979)PK;ETPAATEAPSS(0.08)T(0.92)PK;ETPAATEAPSS(0.143)T(0.857)PK;ETPAATEAPS(0.005)S(0.03)T(0.965)PK 250.81 3.81E-27 333011000 37330.5 40974.9 34564.2 36471.7 29526.2 27607.8 33134.3 34759 42880.8 38022.4 TRUE FALSE 34155.34494 38307.42656 32218.07841 39280.75665 28350.10893 29170.92978 30923.9713 34455.10573 47338.41261 42732.90197 0.799275111 0.896438688 0.753940803 0.919215753 0.663425783 0.682633953 0.723657179 0.806289864 1.107774348 1 15.38305967 -8.2122125 6.276200122 1.053495121 0.778156174 0.642455761 0.081597425 0.124847365 12.10574139 0.061001892 0.021996112 6.13E-09 8.2122125 -0.275338947 ETPAATEAPSST(ph)PK ddPTM_A459_MK2206_30min_R2 3 ETPAATEAPSSTPK 14 0 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 ETPAATEAPS(0.004)S(0.031)T(0.966)PK;ETPAATEAPS(0.01)S(0.282)T(0.708)PK;ETPAATEAPSS(0.227)T(0.773)PK 247.73 5.91E-27 196533000 410505 302758 320461 264535 237027 230796 412102 277670 329233 351111 TRUE FALSE 441933.5784 287723.478 331145.0098 242921.6443 227720.129 239579.1035 357992.5124 313962.4224 357869.0912 339654.2768 1.301127672 0.84710689 0.97494727 0.715202666 0.670446818 0.705361657 1.053990887 0.924358808 1.053627514 1 18.37370749 -9.720882483 13.6049819 0.999999465 0.900879816 0.012114265 0.184852564 0 0 0.185084565 0.044889601 1.90E-10 9.720882483 -0.099119649 ETPHS(ph)PGVEDAPIAK ddPTM_A459_MK2206_30min_R1 7 ETPHSPGVEDAPIAK 15 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 ET(0.004)PHS(0.996)PGVEDAPIAK;ET(0.154)PHS(0.846)PGVEDAPIAK;ET(0.018)PHS(0.982)PGVEDAPIAK;ET(0.103)PHS(0.897)PGVEDAPIAK;ETPHS(1)PGVEDAPIAK;ET(0.056)PHS(0.944)PGVEDAPIAK;ET(0.178)PHS(0.822)PGVEDAPIAK 210.2 8.18E-07 276078800 40411.6 40657.6 40815.8 35381.3 41666.2 36653.8 38732.5 38050.4 32762.7 29805 TRUE FALSE 36974.38121 38010.78285 38045.33722 38106.37386 40006.54702 38729.10648 36148.7256 37717.72936 36168.49991 33497.46842 1.103796285 1.134735986 1.135767537 1.137589664 1.194315538 1.156180103 1.079147987 1.12598746 1.079738309 1 15.03176445 -8.652153907 0.814441351 1.000115818 1.141546704 0.703774583 0.027385339 0.467566105 0.665162975 0.028391912 0.01015162 2.23E-09 8.652153907 0.141430887 ETPHS(ph)PGVEDAPIAK ddPTM_A459_MK2206_30min_R2 4 ETPHSPGVEDAPIAK 15 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 ET(0.005)PHS(0.995)PGVEDAPIAK;ET(0.058)PHS(0.942)PGVEDAPIAK;ET(0.037)PHS(0.963)PGVEDAPIAK;ET(0.099)PHS(0.901)PGVEDAPIAK 160.81 0.00012582 437716000 475882 540080 512668 522026 563890 440398 537400 460954 451147 499313 TRUE FALSE 512315.8918 513260.4125 529760.0952 479374.8059 541748.8453 457157.6545 466838.7345 521202.2705 490386.9506 483020.4577 1.060650504 1.06260595 1.096765337 0.992452386 1.121585715 0.946456091 0.966498886 1.079048024 1.015250892 1 18.88172477 -6.761279139 25 1.004206794 1.064111291 0.346338436 0.044740096 5.768269683 899979.8462 0.015501613 0.014577829 1.73E-07 6.761279139 0.059904496 ETPPNGNLS(ph)PAPR ddPTM_A459_MK2206_30min_R1 1 ETPPNGNLSPAPR 13 0 P48634;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 ETPPNGNLS(1)PAPR 121.92 0.002747 12072000 2183.7 1984.2 1993.7 1626.3 2003.1 1582.6 2083.6 1940.8 1190.9 1193.9 TRUE FALSE 1997.964848 1855.028219 1858.373199 1751.557908 1923.312285 1672.205444 1944.606846 1923.83179 1314.698317 1341.809345 1.489007999 1.382482709 1.384975597 1.305370181 1.433372254 1.246231776 1.449242288 1.433759421 0.979795171 1 10.38996398 -8.264768738 24.9987889 0.989897516 1.385833387 0.849696394 0.067380685 104.2260378 782570.9596 0.055709799 0.016669546 5.44E-09 8.264768738 0.395935871 ETPPNGNLS(ph)PAPR ddPTM_A459_MK2206_30min_R2 2 ETPPNGNLSPAPR 13 0 P48634;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 ETPPNGNLS(1)PAPR;ET(0.001)PPNGNLS(0.999)PAPR 89.136 0.022864 37454000 74462 76386 76331 72916 64209 75247 57789 40431 61881 57059 TRUE FALSE 80162.86797 72592.78232 78875.83744 66958.52955 61687.83204 78110.57731 50201.23488 45715.47052 67263.29752 55197.1695 1.452300339 1.315154073 1.428983373 1.213079043 1.117590496 1.415119254 0.909489297 0.828221283 1.218600485 1 15.75230667 -6.634206693 0.714635123 0.980753122 1.405659698 0.506267661 0.14814658 0.599405452 0.68065131 0.10526179 0.121852556 2.32E-07 6.634206693 0.424906576 ETPQGELRPEVVEDEVPRS(ph)PVAEEPGGGGSSSSEAK ddPTM_A459_MK2206_30min_R1 1 ETPQGELRPEVVEDEVPRSPVAEEPGGGGSSSSEAK 36 2 Q7L8J4 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 ETPQGELRPEVVEDEVPRS(1)PVAEEPGGGGSSSSEAK 84.067 3.09E-08 4546200 379.75 506.15 461.92 340.71 510.21 424.34 537.03 363.86 406.87 455.45 TRUE FALSE 347.4502684 473.199543 430.5661574 366.9515432 489.8872553 448.3657641 501.2057086 360.6788104 449.1655925 511.8745845 0.678780074 0.924444302 0.841155569 0.716877834 0.957045476 0.875928944 0.979157246 0.704623401 0.877491491 1 8.999646565 -6.268532066 24.83603543 0.887122459 0.803526657 0.213623356 0.099363814 1058.296338 3705769.76 0.030533124 0.035369576 5.39E-07 6.268532066 -0.083595801 ETPS(ph)QENGPTAK ddPTM_A459_MK2206_30min_R1 3 ETPSQENGPTAK 12 0 O15355 O15355 PPM1G Protein phosphatase 1G 1 ET(0.003)PS(0.997)QENGPTAK;ET(0.001)PS(0.999)QENGPTAK;ETPS(0.948)QENGPT(0.052)AK 156.2 0.00043309 14074000 4875.1 5398.1 5330.8 4677.38 4836.9 4939.5 5135.5 4864.5 4169.3 3968.7 TRUE FALSE 4460.447145 5046.682709 4968.960148 5037.632618 4644.236031 5219.170221 4792.920165 4821.970189 4602.713655 4460.372518 1.000016731 1.131448705 1.114023577 1.129419706 1.04122156 1.170119805 1.074556025 1.08106894 1.031912388 1 12.12294849 -8.324795183 1.646759961 1.000273208 1.098929595 0.324826891 0.045708405 0.395875854 2.119305903 0.041178556 0.012223869 4.73E-09 8.324795183 0.098656386 ETPS(ph)QENGPTAK ddPTM_A459_MK2206_30min_R2 3 ETPSQENGPTAK 12 0 O15355 O15355 PPM1G Protein phosphatase 1G 1 ETPS(1)QENGPTAK;ET(0.002)PS(0.998)QENGPTAK;ET(0.014)PS(0.986)QENGPTAK 155.09 0.0004247 7520500 52613 63467 58360 66098 60861 63510 64594 51101 50585 53077.5 TRUE FALSE 56641.09173 60315.32107 60305.69327 60697.58196 58471.29134 65926.91755 56112.73021 57780.07616 54984.79186 51345.58552 1.103134596 1.174693412 1.174505903 1.182138276 1.138779327 1.283984142 1.092844295 1.12531731 1.070876713 1 15.64795262 -8.292209929 1.134526267 1.003740399 1.171794317 0.558492506 0.048277752 0.336524718 0.886727699 0.044569818 0.014637867 5.10E-09 8.292209929 0.168053918 ETPSSSPAS(ph)PQETR ddPTM_A459_MK2206_30min_R1 1 ETPSSSPASPQETR 14 0 Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-5;Q9BX66-12;Q9BX66-7;Q9BX66-3;Q9BX66-2;Q9BX66-11;Q9BX66;S4R406 Q9BX66-4 SORBS1 Sorbin and SH3 domain-containing protein 1 1 ETPSSS(0.001)PAS(0.964)PQET(0.035)R 147.83 0.00047108 1851100 584.68 631.01 715.49 562.69 839.42 664.88 548.9 602.8 809.31 599.71 TRUE FALSE 534.9498957 589.9311343 666.9245323 606.0284813 805.9841239 702.524931 512.2838825 597.5297832 893.4406706 674.0066024 0.793686432 0.875260171 0.989492581 0.899143242 1.195810428 1.042311646 0.760057662 0.886534021 1.325566645 1 9.396618913 -4.983581715 1.25996278 1.010195361 0.73900127 0.197991574 0.149744704 1.891004601 3.3660621 0.04750933 0.607929972 1.04E-05 4.983581715 -0.27119409 ETQPWS(ph)SPK ddPTM_A459_MK2206_30min_R1 2 ETQPWSSPK 9 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 ETQPWS(0.94)S(0.06)PK;ETQPWS(0.5)S(0.5)PK 131.43 0.0036045 14055200 8093 9711.8 8916.2 7172.5 5550.9 4844 6676.4 5664.8 9942.3 9711.3 TRUE FALSE 7404.647852 9079.560055 8310.993186 7724.927193 5329.795899 5118.263094 6231.029538 5615.273251 10975.83766 10914.40916 0.678428648 0.831887455 0.761469821 0.707773282 0.488326562 0.468945503 0.570899391 0.514482568 1.005628202 1 13.41394641 -8.272477737 24.5137878 1.002814241 0.629864724 0.635074089 0.113708021 463.0071204 1028223.692 0.123096167 0.033061161 5.34E-09 8.272477737 -0.372949516 ETQS(ph)PEQVK ddPTM_A459_MK2206_30min_R1 3 ETQSPEQVK 9 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 ETQS(1)PEQVK;ET(0.012)QS(0.988)PEQVK;ETQS(1)PEQVK 173.04 0.00045359 838610000 21688.1 22958.4 23341 17684.6 17610.4 15441.6 21708.5 18398.5 12419 18584.6 TRUE FALSE 19843.41321 21463.80399 21756.67795 19046.67096 16908.94048 16315.89005 20260.36557 18237.64385 13709.99949 20887.00055 0.950036515 1.027615427 1.041637256 0.91189115 0.809543737 0.781150458 0.969998805 0.873157628 0.6563891 1 14.35031771 -5.958595457 4.2494059 0.845422284 1.007348037 0.365617374 0.092960042 0.221022112 8.783179721 0.026804592 0.039888335 1.10E-06 5.958595457 0.161925753 ETQS(ph)PEQVK ddPTM_A459_MK2206_30min_R2 8 ETQSPEQVK 9 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 ET(0.315)QS(0.685)PEQVK;ET(0.112)QS(0.888)PEQVK;ETQS(1)PEQVK;ET(0.054)QS(0.946)PEQVK;ET(0.004)QS(0.996)PEQVK;ETQS(1)PEQVK;ET(0.017)QS(0.983)PEQVK;ET(0.001)QS(0.999)PEQVK 173.04 0.00045359 2087480900 8915245 10276797 8948595 10107994 9096984 7717732 10054714 8736014 7371318 10149440 TRUE FALSE 9597803.012 9766466.205 9246936.691 9282138.556 8739790.699 8011435.699 8734517.974 9877841.025 8012461.915 9818264.604 0.977545768 0.994724282 0.941809685 0.94539503 0.890156362 0.815972682 0.88961933 1.006067918 0.816077203 1 23.22703662 -5.762409767 1.737400379 0.899743178 0.983724415 0.210314448 0.060701612 0.545748167 3.35217217 0.019051378 0.040096658 1.73E-06 5.762409767 0.083981237 ETQS(ph)PEQVKSEK ddPTM_A459_MK2206_30min_R1 3 ETQSPEQVKSEK 12 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 ETQS(0.999)PEQVKS(0.001)EK;ETQS(0.998)PEQVKS(0.002)EK;ET(0.001)QS(0.993)PEQVKS(0.006)EK 219.84 1.65E-07 86609100 5210 5902 6197.6 7045.2 6104.4 4753.4 4468.3 6676.3 2988.97 1780.21 TRUE FALSE 4766.862141 5517.778727 5776.92418 7587.822525 5861.248822 5022.5334 4170.22786 6617.929813 3299.684128 2000.755855 2.382530647 2.757847098 2.887370873 3.792477981 2.929517266 2.510317982 2.084326206 3.307714831 1.649218779 1 10.96632942 -8.452959205 4.173753807 1.00937511 2.82676794 0.65028343 0.453289498 0.12586523 4.10824109 0.461841948 0.12099798 3.52E-09 8.452959205 1.81739283 ETQST(ph)PQSAPQVR ddPTM_A459_MK2206_30min_R2 1 ETQSTPQSAPQVR 13 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 ETQS(0.209)T(0.791)PQSAPQVR 162.88 0.00084939 1637000 8442.5 11623 9555.3 10585 10326 12800 11241 8326.7 9564 7969.2 TRUE FALSE 9088.864291 11045.81872 9873.868933 9720.17164 9920.549356 13287.11297 9765.043197 9415.02828 10395.85943 7709.165657 1.178968606 1.432816366 1.280796051 1.260859096 1.286851236 1.723547471 1.266679642 1.221277204 1.348506427 1 12.91235901 -9.353407712 0.885613507 0.996521398 1.345799764 0.317168544 0.146290753 5.176907528 4.522698121 0.200831754 0.048106464 4.43E-10 9.353407712 0.349278366 ETQSTPQS(ph)APQVR ddPTM_A459_MK2206_30min_R1 1 ETQSTPQSAPQVR 13 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 ETQS(0.051)T(0.398)PQS(0.551)APQVR 134.06 0.0015791 0 1007.5 902.63 1000.2 729 1120.1 1094 1063 991.12 621.89 744.19 TRUE FALSE 921.8068344 843.8686229 932.3092107 785.1477063 1075.484045 1155.941335 992.0892096 982.4547423 686.537691 836.3858755 1.102131039 1.008946525 1.114687895 0.938738601 1.285870645 1.38206702 1.18616208 1.174642914 0.820838456 1 9.708024888 -8.251649932 24.62850918 0.910419226 1.149873772 0.36543553 0.125835057 579.7718721 1458613.728 0.095963746 0.035248807 5.60E-09 8.251649932 0.239454546 ETQSTPQS(ph)APQVR ddPTM_A459_MK2206_30min_R2 2 ETQSTPQSAPQVR 13 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 ETQS(0.004)T(0.105)PQS(0.891)APQVR;ETQST(0.027)PQS(0.973)APQVR 164.93 0.00036255 23977000 38721 48226 48999 55205 50396 60805 56965 42733 46373 44852 TRUE FALSE 41685.50953 45831.16697 50632.6022 50694.57491 48417.19982 63118.97688 49485.42707 48318.34982 50406.43972 43388.48291 0.960750566 1.056297983 1.166959497 1.168387819 1.11589981 1.454740351 1.140519874 1.113621555 1.161746997 1 15.40502452 -4.9735885 1.690054825 1.179935315 0.92563539 0.262600903 0.108860221 0.845618474 3.195496411 0.030944594 0.312390307 1.06E-05 4.9735885 -0.254299925 ETQTHENMSQLS(ph)EEEQNKDYQDCSK ddPTM_A459_MK2206_30min_R1 1 ETQTHENMSQLSEEEQNKDYQDCSK 25 1 A0A087X0M4;Q9BWU0 A0A087X0M4 SLC4A1AP Kanadaptin 1 ETQTHENMS(0.031)QLS(0.697)EEEQNKDY(0.251)QDCS(0.02)K 52.654 0.0094839 12875000 2453 3185.9 3396.5 2651.8 2505.7 2515.5 2625 2773 2605.8 2236.3 TRUE FALSE 2244.359469 2978.497331 3165.955043 2856.042095 2405.892663 2657.925436 2449.89104 2748.755953 2876.682235 2513.349727 0.892975396 1.185070784 1.259655594 1.136348859 0.957245479 1.057523116 0.97475135 1.093662344 1.144561063 1 11.29539572 -6.214274559 24.0683465 1.040458317 1.133348533 0.124297887 0.101614384 527.7160416 269294.0662 0.030725414 0.039666181 6.11E-07 6.214274559 0.092890217 ETQTHENMSQLS(ph)EEEQNKDYQDCSK ddPTM_A459_MK2206_30min_R2 1 ETQTHENMSQLSEEEQNKDYQDCSK 25 1 A0A087X0M4;Q9BWU0 A0A087X0M4 SLC4A1AP Kanadaptin 1 ET(0.001)QT(0.003)HENMS(0.136)QLS(0.562)EEEQNKDY(0.246)QDCS(0.052)K 59.429 0.0044627 6245700 6640.4 7500.3 7489.5 6120.9 9097.2 6150.5 9569.2 7277.9 7279.1 9080.1 TRUE FALSE 7148.79413 7127.846008 7739.196192 5620.80289 8739.998218 6384.561587 8312.752545 8229.146519 7912.22296 8783.817081 0.813859631 0.811474777 0.88107438 0.639904365 0.99501141 0.726855025 0.946371318 0.936853129 0.900772738 1 13.1006323 -7.588692301 0.766838167 0.977743195 0.805392546 0.3067992 0.092594022 0.809287474 0.895707245 0.078204909 0.039402752 2.58E-08 7.588692301 -0.172350649 ETQTHENMSQLSEEEQNKDY(ph)QDCSK ddPTM_A459_MK2206_30min_R2 1 ETQTHENMSQLSEEEQNKDYQDCSK 25 1 A0A087X0M4;Q9BWU0 A0A087X0M4 SLC4A1AP Kanadaptin 1 ETQTHENMS(0.001)QLS(0.386)EEEQNKDY(0.583)QDCS(0.03)K 76.533 0.00066194 21183000 37109 39142 44734 44011 46858 28290 51882 42085 37196 56332 TRUE FALSE 39950.09357 37198.2652 46225.40923 40415.16052 45018.11948 29366.59577 45069.83108 47585.654 40431.24085 54493.89145 0.733111409 0.682613486 0.848267723 0.741645704 0.826113134 0.538897021 0.827062078 0.873229141 0.741940789 1 15.7338069 -9.489367023 0.502598969 1.023426417 0.740126677 0.396314745 0.091540903 4.20180464 1.347745064 0.297179045 0.046259955 3.24E-10 9.489367023 -0.283299741 ETS(ph)FGSSENITMTSLSK ddPTM_A459_MK2206_30min_R2 1 ETSFGSSENITMTSLSK 17 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;A0A087WZS7 Q9UMZ2-6 SYNRG Synergin gamma 1 ET(0.026)S(0.923)FGS(0.039)S(0.012)ENITMTSLSK 154.47 8.21E-05 8128800 12387 17392 14611 19344 15481 17880 18356 10744 15963 17292 TRUE FALSE 13335.35824 16528.33857 15098.12345 17763.53332 14873.13815 18560.43593 15945.83515 12148.27769 17351.43289 16727.76346 0.797199116 0.98807821 0.902578727 1.061919208 0.889128914 1.109558727 0.953255657 0.726234426 1.037283492 1 14.02995695 -4.754756922 24.88896222 0.957712119 0.797198828 0.190291246 0.102129141 387.2270186 1442097.049 0.025092739 0.236313929 1.76E-05 4.754756922 -0.160513291 ETS(ph)FSRS(ph)ISLTR ddPTM_A459_MK2206_30min_R1 1 ETSFSRSISLTR 12 1 A0A087WZ32;A0A087X038;A8K727;Q9HB19 A0A087WZ32 PLEKHA2 Pleckstrin homology domain-containing family A member 2 2 ET(0.003)S(0.97)FS(0.455)RS(0.571)ISLTR 128.57 0.020339 0 1747.2 2055.4 2197.5 2104.7 2150.7 1783.6 2211.7 1942 1658.4 2087.2 TRUE FALSE 1598.591465 1921.593086 2048.339823 2266.804359 2065.033065 1884.585891 2064.161528 1925.021299 1830.796615 2345.778094 0.681475997 0.819170872 0.873202725 0.966333672 0.880319017 0.803394786 0.879947483 0.820632311 0.780464537 1 11.19585083 ETS(ph)HGSPTVTK ddPTM_A459_MK2206_30min_R2 1 ETSHGSPTVTK 11 0 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 ET(0.109)S(0.662)HGS(0.23)PTVTK 182.41 3.66E-05 5906000 19767 20399 19758 22478 25026 22866 24090 20930 22702 24646 TRUE FALSE 21280.37672 19386.01532 20416.72186 20641.4755 24043.35349 23736.18165 20926.95406 23665.62286 24676.57892 23841.80304 0.892565746 0.813110287 0.856341352 0.865768225 1.008453658 0.995569908 0.877742091 0.992610451 1.035013119 1 14.54120572 -6.204446808 6.107995666 0.979632918 0.85262438 0.679855688 0.042908903 0.141805347 11.54313874 0.013313382 0.017170168 6.25E-07 6.204446808 -0.127008537 ETS(ph)RSRGGGGAVS(ph)ER ddPTM_A459_MK2206_30min_R1 1 ETSRSRGGGGAVSER 15 2 Q8N7J2-2;Q8N7J2 Q8N7J2-2 AMER2 APC membrane recruitment protein 2 2 ETS(0.999)RS(0.001)RGGGGAVS(1)ER 117.14 0.020738 93236000 6636 2127.4 2648.8 6043.2 3410.4 5229.6 3786.1 2939.1 1778.6 1904.2 TRUE FALSE 6071.573353 1988.905873 2469.006836 6508.648311 3274.556546 5525.695433 3533.536177 2913.403759 1963.491835 2140.106672 2.837042393 0.929348943 1.153684005 3.041272847 1.53009034 2.581971967 1.651102827 1.361335767 0.917473816 1 11.06346699 -7.842302048 2.309456233 0.986089876 1.954431856 0.288120525 0.654117144 0.431934254 4.500577658 0.46782193 0.18579519 1.44E-08 7.842302048 0.96834198 ETS(ph)RSRGGGGAVS(ph)ER ddPTM_A459_MK2206_30min_R2 2 ETSRSRGGGGAVSER 15 2 Q8N7J2-2;Q8N7J2 Q8N7J2-2 AMER2 APC membrane recruitment protein 2 2 ETS(1)RS(0.005)RGGGGAVS(0.995)ER;ETS(0.997)RS(0.004)RGGGGAVS(0.999)ER 107.09 0.041206 36421000 54256 74660 51510 59053 63094 64233 40966 38738 29863 26130 TRUE FALSE 58409.88108 70952.49297 53227.31769 54228.181 60616.61254 66677.43183 35587.11499 43801.18961 32460.42976 25277.38024 2.310756911 2.806955954 2.105729201 2.145324416 2.39805755 2.637829996 1.407864053 1.732821566 1.284169065 1 14.62555933 -7.658643196 1.0638119 1.12095172 2.409521532 0.757289153 0.28201496 0.265288361 0.546805442 0.241274742 0.102356203 2.19E-08 7.658643196 1.288569811 up ETSFGS(ph)SENITMTSLSK ddPTM_A459_MK2206_30min_R1 5 ETSFGSSENITMTSLSK 17 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;A0A087WZS7 Q9UMZ2-6 SYNRG Synergin gamma 1 ETSFGS(0.765)S(0.226)ENIT(0.01)MTSLSK;ETS(0.002)FGS(0.763)S(0.224)ENIT(0.01)MTSLSK;ETSFGS(0.98)S(0.02)ENITMTSLSK;ETSFGS(0.922)S(0.077)ENIT(0.001)MTSLSK;ETSFGS(0.957)S(0.043)ENITMTSLSK 321.09 1.23E-118 85136000 12096.76 10920.1 12023.39 10263.09 12027.44 10475.69 12357.9 11468.95 11455.53 10897.19 TRUE FALSE 11067.86704 10209.19951 11207.27579 11053.55497 11548.3616 11068.81451 11533.52704 11368.67818 12646.37334 12247.21617 0.903704719 0.833593477 0.915087611 0.902536121 0.94293768 0.903782081 0.94172642 0.928266312 1.032591665 1 13.58016624 -7.41519045 0.427540881 1.013863524 0.871020018 0.653180421 0.030815926 0.676329252 0.294894921 0.032591159 0.032146801 3.84E-08 7.41519045 -0.142843505 ETSFGS(ph)SENITMTSLSK ddPTM_A459_MK2206_30min_R2 8 ETSFGSSENITMTSLSK 17 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;A0A087WZS7 Q9UMZ2-6 SYNRG Synergin gamma 1 ETS(0.001)FGS(0.915)S(0.084)ENITMTSLSK;ETSFGS(0.769)S(0.23)ENITMTSLSK;ETS(0.007)FGS(0.928)S(0.065)ENITMTSLSK;ETS(0.009)FGS(0.869)S(0.113)ENIT(0.009)MTSLSK;ET(0.002)S(0.046)FGS(0.705)S(0.153)ENIT(0.091)MT(0.002)SLSK;ETS(0.001)FGS(0.941)S(0.057)ENIT(0.001)MTSLSK;ETS(0.001)FGS(0.941)S(0.054)ENIT(0.004)MTSLSK;ETSFGS(0.953)S(0.047)ENITMTSLSK 281.65 8.41E-64 84378900 374489 392008 376434 433496 386939 387668 461772 371019 369504 439362 TRUE FALSE 403160.1658 372541.4528 388984.1217 398077.9901 371745.8306 402420.9774 401140.7817 419512.4572 401642.79 425025.6539 0.948554898 0.876515216 0.915201513 0.936597559 0.874643277 0.946815736 0.943803693 0.987028555 0.944984818 1 18.6971904 -7.264647038 1.76663667 0.973803921 0.91064134 0.518339361 0.026728385 0.289504844 1.762825954 0.01366018 0.008429452 5.44E-08 7.264647038 -0.06316258 ETSFGSSENIT(ph)MTSLSK ddPTM_A459_MK2206_30min_R1 1 ETSFGSSENITMTSLSK 17 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;A0A087WZS7 Q9UMZ2-6 SYNRG Synergin gamma 1 ETSFGS(0.018)S(0.074)ENIT(0.889)MT(0.017)S(0.002)LSK 112.12 0.019919 10328000 4218.7 3797.3 3936.1 3461.1 3753.3 3549.7 4327.4 3971.8 4226.3 4244.8 TRUE FALSE 3859.877412 3550.09508 3668.928499 3727.674522 3603.798113 3750.680946 4038.727042 3937.074971 4665.639009 4770.677871 0.809083639 0.744148982 0.769058108 0.781372086 0.75540588 0.786194551 0.846572993 0.825265314 0.977982403 1 12.21997856 -8.138578807 1.120054273 1.008789579 0.772221804 0.903870197 0.026392929 0.125167095 0.299676001 0.023425785 0.007980784 7.27E-09 8.138578807 -0.236567776 ETSHGS(ph)PTVTK ddPTM_A459_MK2206_30min_R1 3 ETSHGSPTVTK 11 0 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 ET(0.001)S(0.032)HGS(0.967)PTVTK;ET(0.006)S(0.012)HGS(0.969)PT(0.012)VT(0.001)K;ET(0.003)S(0.064)HGS(0.906)PT(0.02)VT(0.008)K 151.16 0.00060076 9214600 6681 5525.8 4731.2 4865.8 4658.2 3745.21 7321.5 6678 1120.39 4192.3 TRUE FALSE 6112.745867 5166.069416 4410.059326 5240.564759 4472.65403 3957.260554 6833.096094 6619.61495 1236.85855 4711.673774 1.297361863 1.096440387 0.935985711 1.112251189 0.949270736 0.839884241 1.450248133 1.404939151 0.262509378 1 12.20202394 -4.817168453 3.327123824 1.021740578 1.32339922 0.076228654 0.310111996 0.883127545 15.861876 0.077691236 0.653890453 1.52E-05 4.817168453 0.301658642 ETSQVILRPS(ph)SSPNPTTIQNENLK ddPTM_A459_MK2206_30min_R2 1 ETSQVILRPSSSPNPTTIQNENLK 24 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2;Q9ULH0-5 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 ET(0.011)S(0.067)QVILRPS(0.306)S(0.306)S(0.306)PNPT(0.004)T(0.001)IQNENLK 73.981 0.00027791 7797900 23662 19087 20555 21584 14084 23038 30758 17688 24052 21158 TRUE FALSE 25473.58091 18139.16734 21240.29344 19820.51816 13530.99139 23914.72723 26719.43765 19999.88233 26143.99948 20467.61619 1.244579763 0.886237418 1.037751209 0.968384299 0.661092687 1.168417807 1.305449418 0.977147614 1.277334851 1 14.32105546 ETSQVILRPSSS(ph)PNPTTIQNENLK ddPTM_A459_MK2206_30min_R2 1 ETSQVILRPSSSPNPTTIQNENLK 24 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2;Q9ULH0-5 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 ETSQVILRPS(0.043)S(0.209)S(0.743)PNPT(0.004)T(0.001)IQNENLK 86.987 4.97E-05 6510100 36340 28978 36723 37014 26721 37535 43374 22775 41583 38799 TRUE FALSE 39122.21834 27538.99466 37947.32649 33989.8378 25671.79928 38963.42073 37678.9417 25751.7707 45199.81418 37532.99181 1.042342122 0.733727671 1.011039213 0.905598945 0.683979561 1.038111242 1.003888576 0.686110258 1.204268884 1 15.19587167 -8.279517242 24.97326304 1.102134433 0.889691255 0.265903853 0.142232305 1224.933906 1692141.221 0.129013264 0.033584168 5.25E-09 8.279517242 -0.212443178 ETSS(ph)LESFVR ddPTM_A459_MK2206_30min_R2 2 ETSSLESFVR 10 0 A0A087X2H1;Q9ULT8;H0YJP0 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 ET(0.008)S(0.146)S(0.789)LES(0.056)FVR;ET(0.004)S(0.136)S(0.582)LES(0.278)FVR 104.07 0.013546 3784000 28616 33533 28375 36481 38470 39753 29724 23342.2 26344 25486 TRUE FALSE 30806.86296 31867.79998 29321.00834 33500.3856 36959.4745 41265.82827 25821.2031 26393.10569 28635.3535 24654.39391 1.249548583 1.292580953 1.189281247 1.358799804 1.499102945 1.67377176 1.047326622 1.070523404 1.161470593 1 14.58955717 -7.321529527 24.99937025 1.075706741 1.369501704 0.562157923 0.132738709 220.9058713 91902.77429 0.061415325 0.04140621 4.77E-08 7.321529527 0.293794962 ETSVSKEDTDHEEKAS(ph)NEDVTK ddPTM_A459_MK2206_30min_R2 1 ETSVSKEDTDHEEKASNEDVTK 22 2 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 ET(0.006)S(0.005)VS(0.005)KEDT(0.059)DHEEKAS(0.918)NEDVT(0.008)K 40.689 0.047099 6223800 14485 18487 18737 17031 15995 8134.9 23998 17220 14545 17494 TRUE FALSE 15593.98274 17568.96246 19361.68223 15639.51282 15366.95593 8444.47932 20847.03377 19470.71313 15810.09781 16923.17221 0.921457428 1.038160118 1.144092962 0.924147827 0.908042283 0.49898915 1.231863241 1.150535661 0.934227792 1 14.0467124 -9.718050289 11.76889633 0.999998245 0.975011123 0.00169548 0.191718136 0 0 0.193653604 0.046967898 1.91E-10 9.718050289 -0.024987122 ETTDTDTADQVIASFK ddPTM_A459_MK2206_30min_R1 2 ETTDTDTADQVIASFK 16 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 284.91 5.81E-62 14855500 6215.3 5775.4 6495.1 6576.7 6677.6 5992.6 6377 6223.5 5222.5 5002.3 FALSE TRUE 5686.656097 5399.42041 6054.230708 7083.238574 6411.617052 6331.895833 5951.601965 6169.088596 5765.397564 5622.022689 1.011496469 0.960405304 1.076877672 1.259909283 1.140446669 1.126266503 1.0586229 1.097307666 1.025502365 1 12.45687356 -5.387519329 5.206704056 1.1102198 0.98759008 0.295102405 0.068777749 0.251615672 9.496793068 0.018857473 0.040396033 4.10E-06 5.387519329 -0.122629721 ETTDTDTADQVIASFK ddPTM_A459_MK2206_30min_R2 3 ETTDTDTADQVIASFK 16 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ;; 218.31 1.56E-09 10872100 52084 65334 55544 63483 65305 58111 66309 51436 59140 62253 FALSE TRUE 56071.59109 62089.60856 57395.80924 58296.23583 62740.79757 60322.45483 57602.54865 58158.86181 64283.8903 60221.68971 0.931086314 1.031017377 0.953075371 0.968027236 1.041830574 1.001673236 0.956508343 0.965746097 1.067454112 1 15.87799557 -4.738988567 24.55962489 0.995089306 0.931085995 0.225941283 0.036914419 2458.995739 2689796.375 0.009130973 0.467049427 1.82E-05 4.738988567 -0.064003311 ETTGSES(ph)DGGDSSSTK ddPTM_A459_MK2206_30min_R2 1 ETTGSESDGGDSSSTK 16 0 Q5JPT2;Q96B97-2;Q96B97;Q5JPT1;Q5VSN0;Q5JPT3 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 ET(0.016)T(0.061)GS(0.021)ES(0.902)DGGDSSSTK 241.64 1.43E-21 19032000 17459 11184 13811 17295 15757 10478 16660 20566 15594 16727 TRUE FALSE 18795.67446 10628.61882 14271.45185 15881.94318 15138.30101 10876.74763 14472.52199 23254.04681 16950.33793 16181.19936 1.161574865 0.656849878 0.881977382 0.981505933 0.935548761 0.672184267 0.89440354 1.437102794 1.047532853 1 13.98203092 -7.629752657 10.29444985 1.181198436 0.870544687 0.346791054 0.173951581 0.318504728 28.52174784 0.078246742 0.045110393 2.35E-08 7.629752657 -0.310653749 ETTSGTSTEPVKNS(ph)SPAPPQPAPGK ddPTM_A459_MK2206_30min_R1 1 ETTSGTSTEPVKNSSPAPPQPAPGK 25 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 ETTSGT(0.001)S(0.001)T(0.001)EPVKNS(0.498)S(0.498)PAPPQPAPGK 72.167 0.00041796 17636000 3419 3444.1 2905.5 2752.3 5047 3723.3 4181.9 3261.5 2200.2 1873.9 TRUE FALSE 3128.196096 3219.888464 2708.282755 2964.282623 4845.967303 3934.110028 3902.933081 3232.985049 2428.918663 2106.052879 1.48533597 1.528873513 1.285951925 1.407506265 2.300971334 1.868001543 1.853198046 1.535092058 1.153303741 1 11.04032594 -8.267110736 2.764738255 1.016740438 1.677125149 0.43107027 0.273114718 0.286945968 4.064086158 0.281135627 0.08053786 5.41E-09 8.267110736 0.660384711 ETTSGTSTEPVKNS(ph)SPAPPQPAPGK ddPTM_A459_MK2206_30min_R2 1 ETTSGTSTEPVKNSSPAPPQPAPGK 25 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 ETTS(0.001)GT(0.002)S(0.002)T(0.002)EPVKNS(0.496)S(0.496)PAPPQPAPGK 72.864 0.00033467 39860000 39320 68805 69303 69942 73091 54649 76202 48837 60662 69179 TRUE FALSE 42330.36943 65388.24375 71613.52743 64227.51487 70221.08009 56728.70599 66196.58586 55220.16358 65938.27111 66921.6949 0.632535824 0.977085889 1.07010929 0.959741306 1.049302176 0.847687825 0.989164814 0.825145921 0.985304858 1 16.03018636 -4.760078307 24.97123508 0.964118068 0.632535416 0.651173006 0.073423969 21.51486083 394579.5582 0.018349432 0.111443569 1.74E-05 4.760078307 -0.331582651 ETTSGTSTEPVKNSS(ph)PAPPQPAPGK ddPTM_A459_MK2206_30min_R1 1 ETTSGTSTEPVKNSSPAPPQPAPGK 25 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 ETTSGTSTEPVKNS(0.031)S(0.969)PAPPQPAPGK 111.72 8.61E-08 16777000 1582.8 1901.8 1998.2 1682.4 1533.3 1320.1 1549 1393.5 1137.4 801.04 TRUE FALSE 1448.174548 1777.992474 1862.567751 1811.97874 1472.225414 1394.842921 1445.669036 1381.316776 1255.6368 900.2788827 1.60858438 1.974935221 2.068878641 2.01268604 1.635299286 1.549345373 1.60580134 1.534320979 1.394719819 1 9.814228169 -8.080513565 0.404645919 0.980116246 1.955446129 0.766326446 0.147124352 0.550576395 0.259463032 0.205206597 0.14565058 8.31E-09 8.080513565 0.975329882 ETTSGTSTEPVKNSS(ph)PAPPQPAPGK ddPTM_A459_MK2206_30min_R2 1 ETTSGTSTEPVKNSSPAPPQPAPGK 25 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 ETTSGTSTEPVKNS(0.074)S(0.926)PAPPQPAPGK 107.57 1.47E-07 29615000 35419 62005 51212 56922 68577 47076 61293 39422 48518 46250 TRUE FALSE 38130.70587 58925.92186 52919.38252 52271.29052 65884.32241 48867.51017 53245.15547 44574.59076 52738.00794 44740.86629 0.852256763 1.317049194 1.182797449 1.16831199 1.472575922 1.092234331 1.190078778 0.996283587 1.178743559 1 15.44930557 -7.733854318 20.51108781 1.065635741 1.194572897 0.113181385 0.155788091 59.80457093 44467.93374 0.071404401 0.041187745 1.85E-08 7.733854318 0.128937156 ETVDQVEELRR ddPTM_A459_MK2206_30min_R1 1 ETVDQVEELRR 11 1 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7;A0A2R8Y5T0 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 105.2 0.016006 5720700 2905.7 2362.6 2621.5 1744.8 3790 3583.8 3891.5 3039.4 2583.3 2360.8 FALSE TRUE 2658.554957 2208.794311 2443.559884 1879.184798 3639.036275 3786.711659 3631.905135 3012.826846 2851.843279 2653.273727 1.001990458 0.832478869 0.920960344 0.708251387 1.371526894 1.427184696 1.368839219 1.135513014 1.074839452 1 11.3735578 -6.265140859 24.99987843 1.253262343 0.867463024 0.593736434 0.146617476 223.5401321 1509792.939 0.046834547 0.05515937 5.43E-07 6.265140859 -0.385799318 ETVDQVEELRR ddPTM_A459_MK2206_30min_R2 2 ETVDQVEELRR 11 1 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7;A0A2R8Y5T0 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ; 99.215 0.023647 8059400 26209 42750 35733 42101 41866 44562 47008 30529 39146 39042 FALSE TRUE 28215.58119 40627.09716 36924.32039 38661.21363 40222.13048 46257.83814 40835.79313 34519.24512 42550.84832 37768.06274 0.747075151 1.07569979 0.977659899 1.023648311 1.064977326 1.224787156 1.081225516 0.913979765 1.126635714 1 15.20487916 -4.759068449 24.97908619 1.054753714 0.747074746 0.566312619 0.080652773 48.69243935 512888.8844 0.020828337 0.135798953 1.74E-05 4.759068449 -0.307678968 ETVFTKS(ph)PYQEFTDHLVK ddPTM_A459_MK2206_30min_R1 2 ETVFTKSPYQEFTDHLVK 18 1 P15880;H0YEN5;E9PQD7 P15880 RPS2 40S ribosomal protein S2 1 ET(0.008)VFT(0.34)KS(0.549)PY(0.099)QEFT(0.004)DHLVK;ETVFT(0.142)KS(0.823)PY(0.035)QEFTDHLVK 99.238 0.0013178 49665000 9989.6 10679.4 11005.3 11239.2 10773.2 9255.8 8987.1 10086.9 6984.8 4750.4 TRUE FALSE 9139.932063 9984.169119 10258.2909 12104.84513 10344.08063 9779.855397 8387.586957 9998.711297 7710.894955 5338.915416 1.71194547 1.870074414 1.921418509 2.26728543 1.937487266 1.831805645 1.571028253 1.872798222 1.444281161 1 12.38233098 -8.64564539 0.654615199 0.988656142 1.94158075 0.747070924 0.163525438 0.491168407 0.466059883 0.179298621 0.071102645 2.26E-09 8.64564539 0.952924609 ETVFTKS(ph)PYQEFTDHLVK ddPTM_A459_MK2206_30min_R2 2 ETVFTKSPYQEFTDHLVK 18 1 P15880;H0YEN5;E9PQD7 P15880 RPS2 40S ribosomal protein S2 1 ET(0.006)VFT(0.175)KS(0.796)PY(0.022)QEFT(0.001)DHLVK;ET(0.002)VFT(0.151)KS(0.808)PY(0.038)QEFTDHLVK 77.726 0.0057914 8998600 55334 92131 77496 100036 110251 96718 116955 83284 87831 90747 TRUE FALSE 59570.41358 87555.90851 80079.67796 91862.7388 105921.9918 100398.6713 101598.668 94169.50476 95470.38162 87785.93282 0.678587237 0.997379713 0.912215379 1.046440311 1.206594136 1.143676077 1.157345656 1.072717481 1.087536221 1 16.42170215 -4.20132886 0.782825873 1.113824534 4.92E-11 0.738808048 0.073184311 2.960912361 0.730392645 0.027963493 3.558427921 6.29E-05 4.20132886 -1.113824534 ETVNS(ph)PAIYK ddPTM_A459_MK2206_30min_R1 2 ETVNSPAIYK 10 0 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 1 ET(0.092)VNS(0.908)PAIYK;ET(0.321)VNS(0.678)PAIY(0.001)K 161.48 0.00042476 39436000 9076.7 9937.4 8766.9 7729.5 7929.9 7557.6 7521.3 7087.8 7196 5581.5 TRUE FALSE 8304.679001 9290.473454 8171.827254 8324.827429 7614.035291 7985.504781 7019.5678 7025.832112 7944.049951 6272.978358 1.323881341 1.481030688 1.302702925 1.327093281 1.213783128 1.273000531 1.119016741 1.12001536 1.266392055 1 12.61493487 -2.904225605 0.110693455 0.882848552 2.211850132 0.69896959 0.070622564 40.6997656 0.433995663 0.716152915 8.111000972 0.001246736 2.904225605 1.32900158 ETVNS(ph)PAIYK ddPTM_A459_MK2206_30min_R2 2 ETVNSPAIYK 10 0 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 1 ET(0.009)VNS(0.991)PAIYK;ET(0.139)VNS(0.861)PAIYK 174.9 6.96E-05 31079000 169900 185345 151887 173168 203919 166474 223573 163242 144155 190089 TRUE FALSE 182907.6746 176141.0368 156950.8368 159019.6205 195912.1154 172809.2847 194217.5965 184578.2899 156693.3413 183886.4115 0.994677492 0.95787957 0.853520581 0.864770916 1.065397458 0.939761037 1.056182428 1.003762531 0.852120285 1 17.48845535 -6.24785482 24.96028599 0.987568865 0.915996136 0.195330458 0.068033806 1329.916424 2443589.568 0.020570817 0.026404099 5.65E-07 6.24785482 -0.071572729 ETVQTT(ph)QSPTPVEK ddPTM_A459_MK2206_30min_R2 1 ETVQTTQSPTPVEK 14 0 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 ETVQT(0.001)T(0.433)QS(0.433)PT(0.133)PVEK 120.21 0.004912 7685200 43915 37900 46077 42118 35072 28002 41158 38080 27443 48423 TRUE FALSE 47277.16616 36017.94111 47613.18418 38676.82467 33694.89706 29067.63573 35753.90516 43057.18675 29829.94253 46842.96148 1.009269369 0.768908284 1.016442656 0.825669929 0.719316115 0.62053369 0.763271664 0.919181567 0.636807358 1 15.51554467 -5.992594396 23.28911262 0.76478654 0.916240242 0.226628094 0.126024702 113.5675513 357135.1191 0.034276669 0.050687675 1.02E-06 5.992594396 0.151453702 ETVQTTQS(ph)PTPVEK ddPTM_A459_MK2206_30min_R1 3 ETVQTTQSPTPVEK 14 0 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 ETVQT(0.274)T(0.274)QS(0.441)PT(0.011)PVEK;ETVQTT(0.005)QS(0.978)PT(0.018)PVEK;ETVQT(0.07)T(0.007)QS(0.901)PT(0.022)PVEK 302.15 3.94E-80 66915000 12577.3 13620.5 12699.7 8773.5 11229.9 11325.2 14714.4 10735.4 15844.6 17441.4 TRUE FALSE 11507.53459 12733.80297 11837.67975 9449.23649 10782.5893 11966.42304 13732.82922 10641.54153 17491.70287 19602.17231 0.587054047 0.649611827 0.603896321 0.482050476 0.550071142 0.610464129 0.700576906 0.542875624 0.892334921 1 14.25872592 -8.382405939 3.7238386 0.995326733 0.59238528 0.85976152 0.057977267 0.081224167 1.888327274 0.058945017 0.015649375 4.15E-09 8.382405939 -0.402941453 ETVQTTQS(ph)PTPVEK ddPTM_A459_MK2206_30min_R2 3 ETVQTTQSPTPVEK 14 0 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 ETVQTTQS(0.522)PT(0.478)PVEK;ETVQT(0.272)T(0.022)QS(0.433)PT(0.272)PVEK;ETVQTT(0.001)QS(0.566)PT(0.433)PVEK 233.14 1.33E-13 201733600 418525 358205 371625 370425 339305 280655 413656 347767 252546 393077 TRUE FALSE 450567.5958 340417.0606 384014.792 340160.0926 325982.1808 291335.5227 359342.4703 393221.341 274511.9946 380250.9297 1.184921747 0.895243204 1.009898365 0.894567419 0.857281746 0.766166497 0.945014048 1.034110137 0.72192327 1 18.53659225 -2.221469294 1.237086187 0.894364359 199.9999999 0.418999526 0.097974082 1024.093495 3.015342597 0.028191297 576961.7454 0.006005245 2.221469294 199.1056355 ETVQTTQSPT(ph)PVEK ddPTM_A459_MK2206_30min_R1 1 ETVQTTQSPTPVEK 14 0 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 ETVQT(0.001)T(0.009)QS(0.336)PT(0.655)PVEK 200.63 0.00015905 32239000 8245 8731.8 8848.7 5753.5 6929.9 7610.2 10570 6379.2 10535 11058 TRUE FALSE 7543.719454 8163.358233 8248.074898 6196.635567 6653.867409 8041.082947 9864.894586 6323.427327 11630.15095 12427.94852 0.606996355 0.656854848 0.663671473 0.498604863 0.535395475 0.647016113 0.793766933 0.50880701 0.935806173 1 13.60130055 -8.353938455 5.386511273 0.990101475 0.618032438 0.742526412 0.083516387 0.117091638 5.104704952 0.082409758 0.021533055 4.43E-09 8.353938455 -0.372069037 ETVSEAPPLLFS(ph)DEEEKEAQLGVK ddPTM_A459_MK2206_30min_R1 2 ETVSEAPPLLFSDEEEKEAQLGVK 24 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 ETVSEAPPLLFS(1)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK 148.58 8.01E-10 16920600 4014.4 4600 4580.6 3649.8 3117.4 2807 3648 2967.5 3944.7 4247.9 TRUE FALSE 3672.9542 4300.539164 4269.681634 3930.908228 2993.227357 2965.929914 3404.648576 2941.55546 4354.765681 4774.161922 0.769340098 0.900794576 0.894331132 0.823371367 0.626963937 0.621246192 0.713140575 0.616140698 0.912152908 1 12.22103178 -6.054570075 8.326935656 0.721115811 0.859400564 0.112218029 0.124595989 0.531564478 76.23971565 0.035325588 0.045938062 8.82E-07 6.054570075 0.138284754 ETVSEAPPLLFS(ph)DEEEKEAQLGVK ddPTM_A459_MK2206_30min_R2 2 ETVSEAPPLLFSDEEEKEAQLGVK 24 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 ETVS(0.001)EAPPLLFS(0.999)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK 86.039 5.51E-05 5803000 40116 35941 34018 25066 32786 23111.8 42060 32041 22359 40480 TRUE FALSE 43187.3118 34156.2222 35152.14314 23018.02762 31498.6569 23991.33574 36537.47148 36228.86871 24303.7454 39159.14092 1.102866682 0.872241357 0.897674012 0.587807267 0.804375586 0.612662464 0.933050895 0.925170161 0.620640413 1 15.25706149 -3.250045735 10.32081745 0.825068007 0.914612708 0 0.167504806 0 0 0.037997249 0 0.000562282 3.250045735 0.089544701 ETVSEESNVLCLS(ph)K ddPTM_A459_MK2206_30min_R1 1 ETVSEESNVLCLSK 14 0 P13639 P13639 EEF2 Elongation factor 2 1 ETVSEESNVLCLS(1)K 103.77 0.0066562 3400800 615.06 998.25 576.16 506.24 831.42 586.64 845.32 752.62 759.96 832.71 TRUE FALSE 562.7459172 933.2637436 537.0518645 545.2306925 798.3027808 619.8550498 788.9302452 746.0399227 838.9605615 935.8724014 0.601306243 0.997212592 0.573851589 0.582590844 0.853003871 0.662328592 0.842989113 0.797159871 0.896447593 1 9.870168033 -8.23417493 0.761265413 0.998570749 0.714822897 0.353036179 0.126149183 0.731180832 0.924821475 0.119188415 0.047834911 5.83E-09 8.23417493 -0.283747852 ETVSEESNVLCLSK ddPTM_A459_MK2206_30min_R1 2 ETVSEESNVLCLSK 14 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 287.29 2.60E-65 11650100 2961.4 2955.5 3047.4 2590.6 2761.8 2266.88 2484.7 2756.7 2600.3 2790 FALSE TRUE 2709.517379 2763.096413 2840.550979 2790.128461 2651.791658 2395.228787 2318.950197 2732.598463 2870.61049 3135.646263 0.864101736 0.881188814 0.905890123 0.8898097 0.845692223 0.763870853 0.739544579 0.871462605 0.915476508 1 11.6145471 -8.500346523 2.330743766 0.998056602 0.843338778 0.483362305 0.050637138 0.286067644 3.561576583 0.056305005 0.015451636 3.16E-09 8.500346523 -0.154717824 ETVYCLNDDDETEVLKEDIIQGFR ddPTM_A459_MK2206_30min_R1 1 ETVYCLNDDDETEVLKEDIIQGFR 24 1 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 0 232.29 1.94E-38 7402200 1086.5 1285.1 1361 1037.8 1013.1 1149.9 1042.5 1029.3 878.1 992.49 FALSE TRUE 994.0874696 1201.439756 1268.619112 1117.731536 972.7460817 1215.006344 972.9567271 1020.300939 969.3816373 1115.447154 0.891200866 1.077092493 1.137318884 1.002047952 0.872068281 1.089254959 0.872257124 0.914701279 0.869052051 1 10.12340645 -6.681268023 1.01039467 0.916215529 1.033778577 0.164375233 0.08869972 0.852302502 1.875076476 0.049409468 0.04881947 2.08E-07 6.681268023 0.117563048 ETYEVEASTFCFPESVDVGGAS(ph)PHSK ddPTM_A459_MK2206_30min_R2 1 ETYEVEASTFCFPESVDVGGASPHSK 26 0 C9JUH3;A0A0A0MT72;Q9BSQ5-3;Q9BSQ5-4;Q9BSQ5;Q9BSQ5-2 C9JUH3 CCM2 Cerebral cavernous malformations 2 protein 1 ETYEVEASTFCFPES(0.018)VDVGGAS(0.87)PHS(0.111)K 77.233 0.0021966 0 14204 14261 14121 12569 11669 11145 17835 11777 11743 16453 TRUE FALSE 15291.46916 13552.81948 14591.78709 11542.07249 11210.81643 11569.13078 15493.24308 13316.29434 12764.38491 15916.13996 0.960752368 0.851514219 0.916791831 0.725180384 0.704367796 0.726880438 0.973429683 0.836653508 0.801977423 1 13.95820287 -9.831177451 12.92661849 1.000000221 0.830219436 0.229662521 0.091589335 0 0 0.094573275 0.022937388 1.48E-10 9.831177451 -0.169780785 ETYVEQEQGENANDRNDR ddPTM_A459_MK2206_30min_R2 1 ETYVEQEQGENANDRNDR 18 1 F2Z2C0;Q9Y2L1 F2Z2C0 DIS3 Exosome complex exonuclease RRP44 0 84.859 0.02213 4533400 7117.6 13568 10756 13061 10863 14726 11481 11222 10532 9230.2 FALSE TRUE 7662.528929 12894.23285 11114.59967 11993.87452 10436.46404 15286.40825 9973.530909 12688.75393 11448.05432 8929.01933 0.85816019 1.444081637 1.244772719 1.343246562 1.168825338 1.711991842 1.116979429 1.421069152 1.282117767 1 13.12428602 -4.751758893 24.99525477 1.318941824 0.858159269 0.33333532 0.18790258 419.9063469 1084132.99 0.042858724 0.547515629 1.77E-05 4.751758893 -0.460782555 ETYYLSDS(ph)PLLGPPVGEPR ddPTM_A459_MK2206_30min_R1 2 ETYYLSDSPLLGPPVGEPR 19 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 ETYY(0.002)LS(0.053)DS(0.945)PLLGPPVGEPR;ET(0.001)YYLS(0.011)DS(0.989)PLLGPPVGEPR 258.17 3.51E-47 8136000 1336.79 1424.01 1270.31 1130.93 1122.99 1333.88 1315.85 1288.75 1036.9 771.04 TRUE FALSE 1223.088991 1331.30669 1184.084896 1218.034425 1078.25893 1409.403133 1228.072047 1277.482595 1144.689466 866.5622563 1.411426567 1.536308189 1.366416421 1.405593673 1.244294824 1.626430326 1.417176941 1.47419598 1.320954677 1 9.75915959 -8.661365261 3.198935823 1.000096099 1.434117215 0.652652305 0.095677235 0.380760537 7.469502863 0.090913374 0.024084306 2.18E-09 8.661365261 0.434021116 EVAATEEDVTRLPS(ph)PTSPFSSLSQDQAATSK ddPTM_A459_MK2206_30min_R1 4 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK 31 1 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 EVAATEEDVTRLPS(0.964)PT(0.026)S(0.008)PFS(0.001)SLSQDQAATSK;EVAATEEDVT(0.003)RLPS(0.948)PT(0.036)S(0.012)PFS(0.001)SLSQDQAATSK;EVAATEEDVT(0.002)RLPS(0.67)PT(0.133)S(0.184)PFS(0.004)S(0.006)LS(0.001)QDQAATSK;EVAATEEDVT(0.005)RLPS(0.917)PT(0.046)S(0.019)PFS(0.008)S(0.003)LS(0.002)QDQAATSK 138.34 1.36E-18 339054000 13475.6 14227.16 14972.3 12765.1 15689.8 13133.17 15164.3 14422.2 11479.26 11499.29 TRUE FALSE 12329.42946 13300.9693 13956.02199 13748.27021 15064.84204 13876.75874 14152.71722 14296.10823 12672.57016 12923.90886 0.954001579 1.029175418 1.079860756 1.06378576 1.165656784 1.073727685 1.09508024 1.106175259 0.980552424 1 13.65775486 -4.827536024 1.938826439 1.078973792 0.923025805 0.330380779 0.049742347 0.740666984 3.25607139 0.013151653 0.203595392 1.49E-05 4.827536024 -0.155947986 EVAATEEDVTRLPS(ph)PTSPFSSLSQDQAATSK ddPTM_A459_MK2206_30min_R2 4 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK 31 1 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 EVAATEEDVT(0.006)RLPS(0.644)PT(0.12)S(0.163)PFS(0.018)S(0.024)LS(0.024)QDQAATSK;EVAAT(0.001)EEDVT(0.033)RLPS(0.503)PT(0.183)S(0.183)PFS(0.069)S(0.021)LS(0.007)QDQAATSK;EVAATEEDVT(0.001)RLPS(0.937)PT(0.019)S(0.019)PFS(0.008)S(0.011)LS(0.005)QDQAATSK;EVAATEEDVT(0.004)RLPS(0.671)PT(0.221)S(0.073)PFS(0.012)S(0.015)LS(0.003)QDQAATSK 96.505 2.65E-08 311716000 125827 178503 165518 192218 200200 169385 197758 146320 174138 180952 TRUE FALSE 135460.4119 169638.8006 171036.2875 176513.1745 192339.1421 175831.0649 171792.1371 165444.5264 189284.2085 175047.5511 0.773849226 0.96910125 0.977084721 1.008372716 1.09878225 1.004476006 0.981402688 0.94514048 1.081330229 1 17.41738735 -4.155074368 1.339637028 1.014057909 0.021071826 0.728384701 0.04356265 3.246190248 1.568956439 0.012966586 6.627833983 7.00E-05 4.155074368 -0.992986083 EVAEAATGEDAS(ph)SPPPKTEAASDPQHPAASEGAAAAAASPPLLR ddPTM_A459_MK2206_30min_R2 1 EVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLR 44 1 K7ERT7;Q99536-3;Q99536 K7ERT7 VAT1 Synaptic vesicle membrane protein VAT-1 homolog 1 EVAEAAT(0.011)GEDAS(0.373)S(0.373)PPPKT(0.177)EAAS(0.066)DPQHPAASEGAAAAAASPPLLR 62.135 2.46E-06 12076000 9271.4 11231 12478 15061 10980 15431 12565 10383 11029 10621 TRUE FALSE 9981.225512 10673.28487 12894.01029 13830.46812 10548.87003 16018.23752 10915.20041 11740.09375 11988.28248 10274.43764 0.971461978 1.038819373 1.254960198 1.346104634 1.02671021 1.559037884 1.062364753 1.142650738 1.166806681 1 13.32677181 -5.129266822 4.346122675 1.207165778 0.986282698 0.189153324 0.157586013 0.329378702 9.864398491 0.039047145 0.117174923 7.43E-06 5.129266822 -0.22088308 EVAEAATGEDASSPPPKT(ph)EAASDPQHPAASEGAAAAAASPPLLR ddPTM_A459_MK2206_30min_R2 1 EVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLR 44 1 K7ERT7;Q99536-3;Q99536 K7ERT7 VAT1 Synaptic vesicle membrane protein VAT-1 homolog 1 EVAEAAT(0.001)GEDAS(0.152)S(0.152)PPPKT(0.542)EAAS(0.152)DPQHPAASEGAAAAAASPPLLR 89.329 6.11E-13 12570000 7853.6 12402 9775.7 13832 12522 12243 13794 9069.3 6734.3 12782 TRUE FALSE 8454.877654 11786.13471 10101.61696 12701.88135 12030.32336 12708.91594 11982.83123 10254.68865 7320.037241 12364.92439 0.683779164 0.953191006 0.816957439 1.027251033 0.972939501 1.027819948 0.969098626 0.829336948 0.592000162 1 13.5939658 -1.522959242 0.00380417 1.749288337 1.64E-05 0.006468334 0.143523376 1423239.904 419.9215839 91251.62333 102124.5391 0.02999444 1.522959242 -1.749271923 EVAENQQNQS(ph)SDPEEEKGSQPPPAAESQSSLRR ddPTM_A459_MK2206_30min_R1 1 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQS(0.41)S(0.41)DPEEEKGS(0.177)QPPPAAESQS(0.001)S(0.001)LRR 63.893 8.98E-05 22027000 615.22 841.94 1134.1 982.68 1047.7 964.93 970.78 772.66 733.03 545.93 TRUE FALSE 562.8923084 787.129553 1057.120452 1058.366184 1005.96789 1019.563503 906.0210375 765.9047151 809.2310917 613.56393 0.917414276 1.282881073 1.722918184 1.724948505 1.639548613 1.661707041 1.476653032 1.248288365 1.318902648 1 9.261069862 -8.362528057 1.156546331 1.023770657 1.509554493 0.271032685 0.238117514 0.64704838 1.828580432 0.245243595 0.079137139 4.34E-09 8.362528057 0.485783836 EVAENQQNQSS(ph)DPEEEK ddPTM_A459_MK2206_30min_R2 1 EVAENQQNQSSDPEEEK 17 0 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQS(0.463)S(0.537)DPEEEK 240.34 1.36E-22 5076100 43225 26425 38538 25542 20104 19604 32538 25214 17124 33696 TRUE FALSE 46534.33923 25112.77293 39822.83769 23455.1369 19314.61595 20350.04396 28265.72151 28509.55637 18613.41457 32596.50228 1.427586888 0.770413117 1.221690516 0.71955993 0.592536456 0.62430146 0.867139709 0.874620109 0.571024903 1 14.99242955 -5.771263104 24.98783937 0.737756006 1.102948468 0.442242911 0.199099087 182.3908125 463933.6359 0.053824949 0.080938009 1.69E-06 5.771263104 0.365192462 EVAENQQNQSSDPEEEKGS(ph)QPPPAAESQSSLRR ddPTM_A459_MK2206_30min_R1 1 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQS(0.132)S(0.184)DPEEEKGS(0.683)QPPPAAESQSSLRR 81.001 1.72E-06 10059000 1299.9 1332.3 1358 1675.5 1515.1 1014.8 1281.3 1853.7 939.3 643.9 TRUE FALSE 1189.336679 1245.567028 1265.822744 1804.5473 1454.750359 1072.257099 1195.826815 1837.493296 1036.943596 723.6711932 1.643476609 1.721178126 1.749168345 2.493601123 2.010236655 1.481691007 1.652444959 2.539127319 1.432893289 1 9.499190534 -6.72743131 24.99741361 1.719377139 1.934273942 0.090081944 0.426074633 641.7116011 471684.3988 0.143007538 0.143000274 1.87E-07 6.72743131 0.214896803 EVAENQQNQSSDPEEEKGS(ph)QPPPAAESQSSLRR ddPTM_A459_MK2206_30min_R2 1 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQS(0.067)S(0.067)DPEEEKGS(0.558)QPPPAAES(0.04)QS(0.134)S(0.134)LRR 49.09 0.0045608 7221100 3895.3 6734.5 5463.6 4503.5 5980.6 4681.1 5990.4 4495.6 5063.2 5423.1 TRUE FALSE 4193.527163 6400.074523 5645.753697 4135.549644 5745.771594 4859.242541 5203.853284 5083.190356 5503.587984 5246.144691 0.79935408 1.219957683 1.076171938 0.788302627 1.095236966 0.926250195 0.991938574 0.968938269 1.049072854 1 12.35704188 -4.496604311 15.622816 1.006290094 0.266881172 0.25971342 0.107631239 1041249.73 18506744.82 0.026594508 19348767.38 3.19E-05 4.496604311 -0.739408921 EVAENQQNQSSDPEEEKGSQPPPAAES(ph)QSSLRR ddPTM_A459_MK2206_30min_R1 1 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQSSDPEEEKGS(0.001)QPPPAAES(0.333)QS(0.333)S(0.333)LRR 80.722 1.86E-06 18087000 5484.2 4136.7 3632.5 3169 3116 3499.7 3342.5 3163.9 2540.3 3159.7 TRUE FALSE 5017.739991 3867.400078 3385.936021 3413.076929 2991.883122 3697.84999 3119.527924 3136.238356 2804.373276 3551.147491 1.412991154 1.08905645 0.953476596 0.961119452 0.842511647 1.041311294 0.878456311 0.883161954 0.78970904 1 11.79406957 -3.627304507 0.924575718 0.903778583 4.881074088 0.827621855 0.069365367 5.553630647 0.718768072 0.022564276 36.27132816 0.000235882 3.627304507 3.977295505 EVAENQQNQSSDPEEEKGSQPPPAAES(ph)QSSLRR ddPTM_A459_MK2206_30min_R2 2 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQSSDPEEEKGS(0.002)QPPPAAES(0.333)QS(0.333)S(0.333)LRR;EVAENQQNQSSDPEEEKGS(0.002)QPPPAAES(0.384)QS(0.307)S(0.307)LRR 59.536 0.00028766 98036000 159079 176304 132244 133734 96658 110174 131310 102423 116482 107867 TRUE FALSE 171258.2106 167548.9997 136652.949 122807.5044 92862.72125 114366.7488 114068.8393 115810.0378 126613.3938 104347.3086 1.641232657 1.605685877 1.309597255 1.176911087 0.889938825 1.096020111 1.093165131 1.109851699 1.213384375 1 16.67103386 -5.461831852 1.847176596 1.074970912 1.654237739 0.876026635 0.081565157 0.122975276 0.797734464 0.025075302 0.075364155 3.45E-06 5.461831852 0.579266826 EVAENQQNQSSDPEEEKGSQPPPAAESQS(ph)SLRR ddPTM_A459_MK2206_30min_R1 1 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQSSDPEEEKGS(0.002)QPPPAAES(0.252)QS(0.373)S(0.373)LRR 56.211 0.00043864 20155000 1948.2 1515.9 1512.4 1268.3 1073.8 1087.4 1338.8 1757.8 1314.8 1275.6 TRUE FALSE 1782.49536 1417.214634 1409.742502 1365.984686 1031.028272 1148.967648 1249.491095 1742.43174 1451.478165 1433.630958 1.243343239 0.988549129 0.983337095 0.952814724 0.719172718 0.801438921 0.871556998 1.215397679 1.012448955 1 10.48545798 -10.66413552 15.1153951 1 0.967542519 0 0.154568316 0 0 0.161664202 0.039209329 2.17E-11 10.66413552 -0.032457481 EVAES(ph)PRPR ddPTM_A459_MK2206_30min_R1 1 EVAESPRPR 9 1 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 EVAES(1)PRPR 83.397 0.021398 9055100 3255.8 3239.9 2814.4 2746.4 3227.7 3156.4 3545.5 2952.4 2171.6 2979.8 TRUE FALSE 2978.877113 3028.981921 2623.366369 2957.928204 3099.133874 3335.11264 3308.986164 2926.587478 2397.345591 3348.96012 0.889493158 0.904454461 0.783337596 0.88323781 0.925401845 0.99586514 0.988063771 0.873879465 0.715847757 1 11.70949748 -4.382549684 10.3316755 0.89570681 0.714655222 0.000499411 0.087180798 1491608.143 2162697.972 0.022506013 6082161.498 4.14E-05 4.382549684 -0.181051589 EVDAT(ph)SPAPSTSSTVK ddPTM_A459_MK2206_30min_R2 1 EVDATSPAPSTSSTVK 16 0 Q16666-3;Q16666-2;Q16666;H3BM18;X6RHM1;Q16666-6 Q16666-3 IFI16 Gamma-interferon-inducible protein 16 1 EVDAT(0.5)S(0.5)PAPSTSSTVK 239.51 1.71E-64 0 24516 32603 25561 31924 29692 26920 30391 30110 25932 25733 TRUE FALSE 26392.96381 30983.98243 26413.19098 29315.70708 28526.14289 27944.45946 26400.62519 34045.48038 28187.51849 24893.33432 1.060242211 1.244669839 1.061054765 1.177652889 1.145934993 1.122567958 1.060549979 1.367654487 1.132331978 1 14.60347186 EVDDLEQWIAER ddPTM_A459_MK2206_30min_R1 4 EVDDLEQWIAER 12 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 0 ;;; 181.66 0.0014421 16324400 4419.05 4459.63 4379.22 4275.49 4368.57 4335 4516.88 3989.19 3575.65 3839.85 FALSE TRUE 4043.186592 4169.307276 4081.970748 4604.788981 4194.560606 4580.443954 4215.567177 3954.312932 3947.351613 4315.559607 0.936885818 0.96611046 0.945872869 1.067020132 0.971962153 1.06137891 0.976829788 0.916292044 0.914678969 1 12.07533193 -10.69618552 4.820213195 1.000002508 0.97578117 0.02253393 0.050438595 1.44E-06 2.46E-07 0.051629649 0.012520733 2.01E-11 10.69618552 -0.024221338 EVDDLEQWIAER ddPTM_A459_MK2206_30min_R2 1 EVDDLEQWIAER 12 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 0 152.96 0.0066739 4282300 7658.7 8460.8 9304.9 8779.8 7772.2 7714.9 9570.7 8441.1 7706.5 8832.9 FALSE TRUE 8245.055961 8040.648975 9615.120722 8062.462255 7467.024376 8008.495926 8314.055594 9544.380753 8376.79744 8544.683196 0.964934073 0.941011947 1.125275274 0.943564796 0.873879605 0.937249017 0.973009227 1.116996445 0.980352021 1 13.06081129 -7.558591039 24.98583167 1.038205207 0.964655544 0.166645853 0.068416878 311.5414354 217964.2787 0.033639225 0.019421683 2.76E-08 7.558591039 -0.073549663 EVDEDFDSK ddPTM_A459_MK2206_30min_R2 3 EVDEDFDSK 9 0 Q96C19;H0Y4Y4 Q96C19 EFHD2 EF-hand domain-containing protein D2 0 ;; 172.23 0.0070492 22079900 161551 169392 166736 171045 167593 132539 177692 163101 128369 177774 FALSE TRUE 173919.4688 160980.2396 172294.895 157070.0764 161012.4567 137582.8645 154360.827 184418.8607 139534.3036 171973.2489 1.011316992 0.936077213 1.001870326 0.91334017 0.936264551 0.800024803 0.897586269 1.072369464 0.811372143 1 17.39182464 -5.773456032 24.53296985 0.916629874 0.978387078 0.125338928 0.077502453 380.6581123 777144.5143 0.02164809 0.032404005 1.68E-06 5.773456032 0.061757204 EVDEDS(ph)EPER ddPTM_A459_MK2206_30min_R1 2 EVDEDSEPER 10 0 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EVDEDS(1)EPER;EVDEDS(1)EPER 163.45 0.00039198 31512000 11463.5 12619.9 11488.2 9206.3 9996.4 8965 11857.5 9903.4 11070.7 12794.4 TRUE FALSE 10488.46913 11798.34222 10708.41299 9915.370821 9598.22222 9472.590553 11066.50781 9816.815618 12221.53888 14379.46686 0.729405981 0.82049928 0.74470167 0.689550657 0.667494999 0.65875812 0.769604876 0.682696772 0.849929903 1 13.81172257 -8.538314938 3.266446029 0.999571238 0.721684805 0.775882995 0.047421373 0.111635743 3.171067845 0.049718028 0.013178046 2.90E-09 8.538314938 -0.277886432 EVDEDS(ph)EPER ddPTM_A459_MK2206_30min_R2 2 EVDEDSEPER 10 0 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EVDEDS(1)EPER;EVDEDS(1)EPER 132.03 0.0025097 57994000 118236 114575 112156 124862 104169 110835 120863 106149 85171 117400 TRUE FALSE 127288.2391 108885.3721 115895.2251 114660.3752 100078.8017 115052.9036 104993.5429 120023.0388 92579.01963 113569.2476 1.120798471 0.958757537 1.020480698 1.009607597 0.881213918 1.013063888 0.9244892 1.056826925 0.815176833 1 16.79321271 -1.78222845 1.138522393 0.961846389 199.9675702 0.30065734 0.070063585 2373.283718 3.192844991 0.019812617 1233423.574 0.016510931 1.78222845 199.0057238 EVDEDS(ph)EPEREVR ddPTM_A459_MK2206_30min_R1 1 EVDEDSEPEREVR 13 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EVDEDS(1)EPEREVR 144.88 0.0042505 0 996.09 1124.7 1067.9 889.6 1187.5 733.17 1093.5 1149.1 543.64 459.01 TRUE FALSE 911.3673148 1051.481826 995.4139233 958.1171461 1140.19936 774.6814518 1020.55461 1139.05354 600.1533234 515.8756241 1.766641555 2.038246772 1.929561849 1.857263847 2.210221431 1.501682606 1.978295857 2.208000314 1.163368253 1 9.010879468 -8.359591584 5.383846687 1.024075791 1.931616535 0.749351587 0.198167263 0.107155321 4.486567328 0.184322417 0.048105627 4.37E-09 8.359591584 0.907540745 EVDEDS(ph)EPEREVR ddPTM_A459_MK2206_30min_R2 2 EVDEDSEPEREVR 13 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EVDEDS(1)EPEREVR;EVDEDS(1)EPEREVR 101.61 0.046708 7165800 15945 30637.3 27813.4 33061.2 36722.5 39130.7 35334.4 24259.8 36279.3 27054.6 TRUE FALSE 17165.76146 29115.89623 28740.68487 30359.9942 35280.59013 40619.84621 30694.95084 27430.63916 39434.80794 26171.81062 0.655887424 1.112490712 1.098154243 1.160026513 1.348037805 1.552045703 1.172824887 1.048098642 1.506766517 1 14.67572612 -4.439409126 1.058747445 1.266487145 1.94E-16 0.503453402 0.173682446 2.814129162 1.591281494 0.055181971 4.770534702 3.64E-05 4.439409126 -1.266487145 EVDEQMLNVQNK ddPTM_A459_MK2206_30min_R1 4 EVDEQMLNVQNK 12 0 P68371;P07437;Q5JP53;Q5ST81;Q9BVA1;Q13885 P68371;P07437;Q9BVA1 TUBB4B;TUBB;TUBB2B;TUBB2A Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 ;;; 330.9 7.43E-114 195618000 20974.6 20795 22917.7 19141.2 22670.2 19555.7 25424.5 23745.8 20898 20853 FALSE TRUE 19190.60013 19441.24172 21362.11038 20615.45854 21767.19793 20662.92683 23728.47799 23538.19297 23070.42188 23436.42707 0.818836424 0.829530955 0.911491769 0.879633166 0.928776296 0.881658572 1.01246141 1.004342211 0.984383064 1 14.51646502 -6.211304567 0.432162425 1.016268176 0.792558256 0.804390143 0.030518567 0.752124406 0.249358957 0.029177472 0.076408856 6.15E-07 6.211304567 -0.22370992 EVDEQMLNVQNK ddPTM_A459_MK2206_30min_R2 6 EVDEQMLNVQNK 12 0 P68371;P07437;Q5JP53;Q5ST81;Q9BVA1;Q13885 P68371;P07437;Q9BVA1 TUBB4B;TUBB;TUBB2B;TUBB2A Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 ;;;;; 308.92 2.14E-192 30221200 101817.5 126302 131712 137822 146338 120778 146189 112651 127066 123093 FALSE TRUE 109612.7261 120030.0263 136103.2123 126561.5017 140592.0348 125374.2914 126994.2087 127374.8725 138117.971 119076.4855 0.920523692 1.008007801 1.142989834 1.062858894 1.180686802 1.052888745 1.066492752 1.069689553 1.159909704 1 16.86152902 -4.978733377 3.419221086 1.094077517 0.924534683 0.517760193 0.052417631 0.179761664 4.231000526 0.012817814 0.061929438 1.05E-05 4.978733377 -0.169542835 EVDGLLTSEPMGS(ph)PVSSK ddPTM_A459_MK2206_30min_R1 13 EVDGLLTSEPMGSPVSSK 18 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EVDGLLTS(0.001)EPMGS(0.994)PVS(0.005)SK;EVDGLLTSEPMGS(0.997)PVS(0.003)SK;EVDGLLTSEPMGS(0.932)PVS(0.065)S(0.002)K;EVDGLLTS(0.003)EPMGS(0.992)PVS(0.004)S(0.001)K;EVDGLLTSEPMGS(0.997)PVS(0.003)SK;EVDGLLTSEPMGS(0.994)PVS(0.004)S(0.001)K;EVDGLLTS(0.001)EPMGS(0.985)PVS(0.011)S(0.003)K;EVDGLLTSEPMGS(0.995)PVS(0.004)S(0.001)K;EVDGLLTS(0.006)EPMGS(0.984)PVS(0.009)S(0.002)K;EVDGLLTSEPMGS(0.957)PVS(0.037)S(0.006)K;EVDGLLT(0.001)S(0.001)EPMGS(0.986)PVS(0.01)S(0.002)K;EVDGLLTSEPMGS(0.991)PVS(0.009)SK;EVDGLLTSEPMGS(0.998)PVS(0.001)SK 376.22 8.68E-231 410601300 51588.9 50130.82 51350.5 44820.3 49093.44 42918.83 49940.08 47124.81 45034.39 40903.66 TRUE FALSE 47200.99315 46867.29451 47864.97113 48272.36727 47137.94433 45348.85706 46608.66838 46712.80275 49715.876 45971.11421 1.026753299 1.019494422 1.041196672 1.050058675 1.025381811 0.986464171 1.013868582 1.016133795 1.081459017 1 15.48844001 -6.518021352 24.99168055 1.018645839 1.03429005 0.07520647 0.024351631 610.3223468 3140188.523 0.008160176 0.008380249 3.03E-07 6.518021352 0.015644211 EVDGLLTSEPMGS(ph)PVSSK ddPTM_A459_MK2206_30min_R2 14 EVDGLLTSEPMGSPVSSK 18 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EVDGLLTSEPMGS(1)PVSSK;EVDGLLTS(0.001)EPMGS(0.998)PVSSK;EVDGLLTSEPMGS(0.992)PVS(0.006)S(0.002)K;EVDGLLTS(0.002)EPMGS(0.993)PVS(0.004)S(0.001)K;EVDGLLTSEPMGS(0.995)PVS(0.004)S(0.001)K;EVDGLLTS(0.095)EPMGS(0.903)PVS(0.001)SK;EVDGLLT(0.001)S(0.005)EPMGS(0.988)PVS(0.005)S(0.002)K;EVDGLLTS(0.015)EPMGS(0.977)PVS(0.006)S(0.002)K;EVDGLLTSEPMGS(0.986)PVS(0.011)S(0.004)K;EVDGLLT(0.054)S(0.151)EPMGS(0.699)PVS(0.071)S(0.025)K;EVDGLLTSEPMGS(0.995)PVS(0.004)S(0.001)K;EVDGLLT(0.005)S(0.059)EPMGS(0.861)PVS(0.056)S(0.019)K;EVDGLLTSEPMGS(1)PVSSK;EVDGLLT(0.023)S(0.133)EPMGS(0.808)PVS(0.023)S(0.011)K 202.79 9.96E-11 299807400 984563 1111373 996286 1103120 1144627 992047 1193350 914762 930730 1085101 TRUE FALSE 1059941.9 1056183.833 1029501.678 1012991.567 1099683.193 1029800.044 1036661.712 1034324.534 1011683.213 1049694.243 1.009762516 1.006182362 0.980763384 0.965034889 1.047622391 0.981047624 0.98758445 0.985357918 0.963788474 1 20.00153773 -5.153113632 6.127897814 0.989326838 1.008710069 0.106097804 0.022177593 0.552259628 26.53979094 0.005721111 0.015671665 7.03E-06 5.153113632 0.019383231 EVDIGIPDATGR ddPTM_A459_MK2206_30min_R2 1 EVDIGIPDATGR 12 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 129.88 0.031122 3029100 20287 24689 21416 24599 23014 23938 21049 19135 19465 20579 FALSE TRUE 21840.18832 23462.98016 22129.99875 22589.18301 22110.35472 24848.97736 18285.24102 21636.0102 21158.03052 19907.50892 1.097082935 1.178599505 1.111640781 1.134706663 1.110654016 1.248221335 0.918509749 1.086826599 1.062816579 1 14.28102508 -7.260857838 24.99999433 1.024273786 1.144468937 0.544111998 0.058021541 44.43226813 1910148.28 0.022457135 0.016322654 5.48E-08 7.260857838 0.120195152 EVDKT(ph)PPPQPPLISSMDSISQK ddPTM_A459_MK2206_30min_R1 1 EVDKTPPPQPPLISSMDSISQK 22 1 Q92625;A0A3B3ISP1;A0A3B3ITU5 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 EVDKT(1)PPPQPPLISSMDSISQK 105.96 8.80E-05 7699900 3706.9 3837.9 4017.3 3597.7 3359 3328.6 3013.8 3533.5 3471.5 2851 TRUE FALSE 3391.608689 3588.052012 3744.616869 3874.795477 3225.203917 3517.062455 2812.754901 3502.606982 3832.374848 3204.203404 1.058487325 1.119795331 1.168657665 1.209285114 1.006554051 1.097640197 0.877832817 1.093128788 1.196046057 1 11.64575002 -6.273538932 24.91198915 1.044110376 1.139794953 0.226832196 0.084870482 1155.949103 2379999.529 0.027202673 0.031095534 5.33E-07 6.273538932 0.095684577 EVDKT(ph)PPPQPPLISSMDSISQK ddPTM_A459_MK2206_30min_R2 2 EVDKTPPPQPPLISSMDSISQK 22 1 Q92625;A0A3B3ISP1;A0A3B3ITU5 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 EVDKT(0.999)PPPQPPLISSMDSISQK;EVDKT(0.945)PPPQPPLIS(0.038)S(0.015)MDS(0.002)ISQK 70.112 0.0059159 8552100 38903 40435 41029 39014 37914 25380 43770 36936 32262 42936 TRUE FALSE 41881.44359 38427.0567 42396.88638 35826.4314 36425.30586 26345.85368 38022.94642 41763.66202 35068.09044 41535.00184 1.008340959 0.925172866 1.020750801 0.862560005 0.876978554 0.634304864 0.915443475 1.005505241 0.844302128 1 15.34204 -5.773312059 24.6804557 0.868729768 0.978796673 0.193294708 0.099643346 309.0772774 642497.4119 0.029279515 0.043831801 1.69E-06 5.773312059 0.110066905 EVDPSTGELQSLQMPES(ph)EGPSSLDPSQEGPTGLK ddPTM_A459_MK2206_30min_R1 3 EVDPSTGELQSLQMPESEGPSSLDPSQEGPTGLK 34 0 Q13501;Q13501-2 Q13501 SQSTM1 Sequestosome-1 1 EVDPSTGELQSLQMPES(0.333)EGPS(0.333)S(0.333)LDPS(0.001)QEGPTGLK;EVDPSTGELQSLQMPES(0.652)EGPS(0.172)S(0.172)LDPS(0.003)QEGPTGLK;EVDPSTGELQSLQMPES(0.606)EGPS(0.378)S(0.016)LDPSQEGPTGLK 141.3 2.96E-26 18118600 5044.72 4236.91 5107.42 4479.43 4587.42 4237.15 5013.01 5241.65 4259.13 3889.93 TRUE FALSE 4615.640073 3961.086389 4760.74256 4824.436475 4404.693347 4477.053771 4678.60125 5195.822807 4701.881805 4371.843896 1.055765069 0.906044791 1.088955295 1.103524414 1.007513867 1.024065332 1.070166584 1.188474001 1.075491696 1 12.09402617 -7.521125459 24.97668445 1.105053764 1.031578186 0.119091429 0.066570797 113.6411083 1618972.785 0.030824071 0.018133155 3.01E-08 7.521125459 -0.073475578 EVEDKES(ph)EGEEEDEDEDLSK ddPTM_A459_MK2206_30min_R1 5 EVEDKESEGEEEDEDEDLSK 20 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK 120.33 0.00013799 177959900 14616.81 21194.73 21647.02 17577.66 9608.23 8255.33 10620.2 12631.46 18248.66 17079.55 TRUE FALSE 13373.57355 19814.94922 20177.68059 18931.49442 9225.513853 8722.73965 9911.745836 12521.02448 20145.67351 19195.4936 0.696703812 1.032270888 1.051167582 0.986246815 0.480608316 0.454416012 0.516357956 0.652289789 1.049500155 1 14.22848004 -6.243222283 24.5927611 0.654129021 0.955900446 0.237823589 0.211645019 848.0016769 1144786.738 0.0641179 0.082600903 5.71E-07 6.243222283 0.301771426 EVEDKES(ph)EGEEEDEDEDLSK ddPTM_A459_MK2206_30min_R2 5 EVEDKESEGEEEDEDEDLSK 20 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(0.999)EGEEEDEDEDLS(0.001)K;EVEDKES(0.998)EGEEEDEDEDLS(0.002)K;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(0.999)EGEEEDEDEDLS(0.001)K 90.442 0.00092911 940459700 425912 376825.3 429198 300607.1 320669 180553.2 441911 305678.5 230970.2 432313 TRUE FALSE 458520.1502 358112.7036 443507.2471 276046.5383 308077.9238 187424.2785 383887.5549 345631.7295 251059.5705 418206.6622 1.096396092 0.856305592 1.060497804 0.660072073 0.736664314 0.448161867 0.917937445 0.826461558 0.600324177 1 18.67385652 -5.761691767 24.99999999 0.729087051 0.989590431 0.361971727 0.159078485 7.207135764 714031.8661 0.043059585 0.068671634 1.73E-06 5.761691767 0.260503381 EVEEDEYK ddPTM_A459_MK2206_30min_R1 2 EVEEDEYK 8 0 P14625 P14625 HSP90B1 Endoplasmin 0 ; 152.63 0.013488 19168700 6375.7 6567.6 6546.4 5575.2 5342.3 4861.5 5443.5 5890.7 5750 5629.4 FALSE TRUE 5833.413235 6140.048046 6102.048607 6004.60287 5129.504878 5136.753929 5080.374047 5839.198231 6347.733077 6326.812572 0.922014548 0.970480471 0.964474376 0.949072349 0.810756573 0.81190234 0.802991078 0.92292891 1.003306642 1 12.62726314 -6.0774351 14.21459882 0.879679338 0.95457796 0.135876826 0.069474935 3.611415043 660.5359169 0.021653653 0.02795815 8.37E-07 6.0774351 0.074898622 EVEEDEYK ddPTM_A459_MK2206_30min_R2 1 EVEEDEYK 8 0 P14625 P14625 HSP90B1 Endoplasmin 0 137 0.035441 18926000 118000 122480 121620 133120 110690 113490 123430 102380 86793 123320 FALSE TRUE 127034.1707 116397.8213 125674.7501 122243.6702 106343.7544 117808.9415 107223.4927 115761.4175 94342.09825 119296.0785 1.064864598 0.975705344 1.053469248 1.024708203 0.891427076 0.987534066 0.898801487 0.970370686 0.79082313 1 16.86418709 -6.248450253 23.50229449 0.923678782 1.027529793 0.429479155 0.060127128 339.418457 614135.9566 0.016770465 0.021484084 5.64E-07 6.248450253 0.103851011 EVEEELATSGGQS(ph)PTGEQIPQFQQR ddPTM_A459_MK2206_30min_R2 1 EVEEELATSGGQSPTGEQIPQFQQR 25 0 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 EVEEELAT(0.001)S(0.002)GGQS(0.553)PT(0.445)GEQIPQFQQR 86.825 5.56E-05 2134700 3737.7 6971 6647.6 7818.1 7289.4 5831.5 6378.4 4674.9 6913.2 6334 TRUE FALSE 4023.861186 6624.830277 6869.227666 7179.336221 7003.18153 6053.421819 5540.908418 5285.925481 7514.49764 6127.322099 0.656707958 1.081195042 1.121081535 1.171692316 1.142943266 0.987939221 0.904295274 0.862681184 1.22639181 1 12.58104098 -4.758931281 24.99665159 1.052665385 0.656707437 0.537402637 0.110934176 58.09223204 578848.4231 0.029709074 0.195720325 1.74E-05 4.758931281 -0.395957948 EVELVS(ph)E ddPTM_A459_MK2206_30min_R1 1 EVELVSE 7 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 EVELVS(1)E 98.458 0.040366 224270000 8653.8 8771.4 8355.2 7481.5 8930.8 8710.1 8494.5 8212.9 7578.6 6823.8 TRUE FALSE 7917.748867 8200.380266 7788.072303 8057.726426 8575.067325 9203.258335 7927.847404 8141.095481 8366.42259 7669.183861 1.032410881 1.069263746 1.015502098 1.050662831 1.11811993 1.200030994 1.033727649 1.061533486 1.090914332 1 12.90485734 -6.098662352 6.619671945 1.090243108 1.040655406 0.134207169 0.051495417 0.46805939 26.72255008 0.01568103 0.020391881 7.97E-07 6.098662352 -0.049587702 EVELVS(ph)E ddPTM_A459_MK2206_30min_R2 2 EVELVSE 7 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 EVELVS(1)E;EVELVS(1)E 107.9 0.0165 20859300 194875 215135 215670 231251 232620 224060 236872 180251 182103 226276 TRUE FALSE 209794.7798 204451.7087 222860.3302 212357.0536 223486.17 232586.7603 205770.4219 203810.4246 197941.9898 218892.6327 0.958436916 0.934027364 1.018126227 0.970142535 1.020985345 1.062560935 0.940051839 0.93109769 0.90428804 1 17.73986387 -7.468472676 24.99960009 0.937730424 0.99328053 0.263459026 0.040601611 402.1370636 184782.1275 0.017656523 0.011903946 3.40E-08 7.468472676 0.055550106 EVEPEPTEDKDLEADEEDTR ddPTM_A459_MK2206_30min_R1 1 EVEPEPTEDKDLEADEEDTR 20 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 0 116.87 0.00074701 12066000 1310.4 1446.8 1737.1 1337.9 1462.5 1284.7 1473.4 1490.9 1621.5 1291.9 FALSE TRUE 1198.943599 1352.613057 1619.190492 1440.94529 1404.245528 1357.438604 1375.112174 1477.865218 1790.060728 1451.950325 0.825746982 0.931583563 1.115183119 0.992420515 0.967144332 0.934907056 0.947079353 1.017848333 1.23286637 1 10.50377638 -8.02767326 10.46844216 1.119566076 0.965984153 0.348406475 0.085009948 0.734387055 271.6820974 0.055607594 0.02187029 9.38E-09 8.02767326 -0.153581923 EVEPEPTEDKDLEADEEDTR ddPTM_A459_MK2206_30min_R2 2 EVEPEPTEDKDLEADEEDTR 20 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 0 ; 193.3 4.59E-15 53092000 114034 120864 121466 111076 106971 93869 132815 106336 101757 143178 FALSE TRUE 122764.5307 114862.0695 125515.6158 102000.7355 102770.7811 97441.25057 115376.231 120234.4803 110607.6399 138506.1136 0.886347379 0.829292416 0.906209932 0.736434897 0.741994547 0.703515881 0.833004609 0.868080673 0.798575868 1 17.07959013 -11.27166696 11.57828675 1.000234908 0.809673575 0.438724805 0.063934134 0.000421169 9.14E-06 0.067250972 0.016291288 5.35E-12 11.27166696 -0.190561332 EVFEDAAEIR ddPTM_A459_MK2206_30min_R1 4 EVFEDAAEIR 10 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ;;; 161.27 0.0059319 60369800 17427.3 17227.2 17206.7 16753.3 19715.6 17554.5 18831.4 16825.5 14929 14594.7 FALSE TRUE 15945.01662 16105.70615 16038.75714 18043.64207 18930.2859 18548.42062 17575.19167 16678.39643 16480.92297 16402.80162 0.972091048 0.981887517 0.977805958 1.100034158 1.154088572 1.130808081 1.071474988 1.016801691 1.004762684 1 14.00165463 -5.752335396 24.81431601 1.07529516 0.977724067 0.415068093 0.049021883 181.7633922 495418.3068 0.014929142 0.025392857 1.77E-06 5.752335396 -0.097571094 EVFEDAAEIR ddPTM_A459_MK2206_30min_R2 3 EVFEDAAEIR 10 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ;; 147.95 0.011153 61726000 91617 110666 91732 102762 108202 107045 114592 94365 95768 101588 FALSE TRUE 98631.26796 105170.4874 94790.2991 94366.01588 103953.4458 111118.6725 99545.93275 106698.8295 104097.7275 98273.19188 1.00364368 1.070184914 0.964559075 0.96024169 1.057800646 1.130711951 1.012951048 1.085736888 1.059268815 1 16.58451029 -6.388156383 7.987522684 1.063938715 1.002334998 0.288045701 0.044106484 0.359724356 21.70591935 0.013767676 0.015606054 4.09E-07 6.388156383 -0.061603718 EVFEFRPELVNDDDEEADDTR ddPTM_A459_MK2206_30min_R1 4 EVFEFRPELVNDDDEEADDTR 21 1 Q8WU90;Q8WU90-2 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 0 ;;; 237.39 1.85E-30 19731200 4041.65 4489.68 3777.08 3134.18 3848.74 3466.43 3882.91 3459.76 4127.75 4107.33 FALSE TRUE 3697.886444 4197.401016 3520.702333 3375.575087 3695.436536 3662.696271 3623.888159 3429.511683 4556.844384 4616.177049 0.80107119 0.909280769 0.76268789 0.731249051 0.800540468 0.793447962 0.785040981 0.742933307 0.987146796 1 12.17248284 -8.271414305 24.62711934 0.993573471 0.7920334 0.758017062 0.04582708 314.65481 776841.5064 0.044702895 0.012111912 5.35E-09 8.271414305 -0.201540072 EVFEFRPELVNDDDEEADDTR ddPTM_A459_MK2206_30min_R2 4 EVFEFRPELVNDDDEEADDTR 21 1 Q8WU90;Q8WU90-2 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 0 ;;; 147.6 7.78E-06 19100700 60977 71380 62091.5 71992 59935.9 64880 74289 55536 53978 67113 FALSE TRUE 65645.446 67835.373 64161.59962 66110.02331 57582.51541 67349.05386 64534.76506 62794.74588 58672.90887 64923.10831 1.011126049 1.044857136 0.988270606 1.018281857 0.88693405 1.037366442 0.994018413 0.967217182 0.903729202 1 15.98644445 EVFQRFLESQMVIEES(ph)ILQSDK ddPTM_A459_MK2206_30min_R1 1 EVFQRFLESQMVIEESILQSDK 22 1 Q6ZN66-2;Q6ZN66 Q6ZN66-2 GBP6 Guanylate-binding protein 6 1 EVFQRFLESQMVIEES(0.775)ILQS(0.225)DK 58.564 0.035408 6500800 1909.7 2189.6 1871.6 2103.2 2084.9 1638.7 1963.1 1767.7 1465.2 1535.3 TRUE FALSE 1747.269987 2047.056642 1744.561007 2265.188828 2001.854018 1731.481778 1832.145181 1752.245185 1617.512783 1725.504555 1.012613952 1.1863525 1.011043988 1.312768965 1.160155743 1.003464044 1.061802576 1.015497282 0.93741438 1 10.75280257 -6.764880882 24.98534763 1.008239647 1.142165058 0.374449082 0.085666035 99.12463534 719640.5882 0.02952292 0.027080437 1.72E-07 6.764880882 0.133925411 EVFSSCSSEVVLS(ph)GDDEEYQR ddPTM_A459_MK2206_30min_R1 3 EVFSSCSSEVVLSGDDEEYQR 21 0 Q09666;E9PKR9;E9PLK4 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 EVFSSCSSEVVLS(1)GDDEEYQR;EVFSSCSS(0.002)EVVLS(0.998)GDDEEYQR;EVFSSCSS(0.001)EVVLS(0.999)GDDEEYQR 153.93 4.11E-07 14449600 1816.37 1751.54 1947.11 1626.43 1952.96 2063.23 2213.49 2328.64 1974.14 1939.93 TRUE FALSE 1661.878193 1637.514428 1814.945598 1751.69792 1875.169468 2180.0483 2065.832121 2308.280946 2179.358918 2180.263174 0.762237428 0.751062737 0.832443358 0.803434164 0.860065652 0.999901446 0.947515027 1.05871666 0.999585253 1 11.09028657 -6.577704154 1.115428662 1.016969201 0.77087032 0.904076249 0.03306397 0.131899768 0.348953554 0.015688822 0.017004979 2.64E-07 6.577704154 -0.24609888 EVGDMAPIYFKKAIMESDEEWS(ph)MNKK ddPTM_A459_MK2206_30min_R2 1 EVGDMAPIYFKKAIMESDEEWSMNKK 26 3 Q2TBE0 Q2TBE0 CWF19L2 CWF19-like protein 2 1 EVGDMAPIY(0.001)FKKAIMES(0.018)DEEWS(0.982)MNKK 44.953 0.031648 5892400 24999 14074 20002 8162 10216 4043.4 24745 13001 9022.6 27999 TRUE FALSE 26912.94266 13375.10563 20668.8567 7495.138491 9814.868509 4197.27442 21495.95178 14700.27534 9807.369439 27085.39492 0.993633017 0.493812465 0.763099698 0.276722511 0.362367561 0.15496449 0.793636269 0.542738084 0.362090694 1 14.72522751 -10.79055155 6.856062708 1.000004592 0.518133395 0.249979292 0.245354906 1.73E-05 1.85E-06 0.239133477 0.057997835 1.62E-11 10.79055155 -0.481871197 EVGGGHGCT(ph)SPPFPQEAR ddPTM_A459_MK2206_30min_R1 1 EVGGGHGCTSPPFPQEAR 18 0 A0A1B0GVD3;Q6ZN17-2;Q6ZN17 A0A1B0GVD3 LIN28B Protein lin-28 homolog B 1 EVGGGHGCT(0.634)S(0.366)PPFPQEAR 121.77 0.0012529 3831800 1647.4 1406.7 1224.1 1537.9 1938.3 1403.2 1663.7 1688.3 1506.7 1463.4 TRUE FALSE 1507.279979 1315.123574 1141.011503 1656.349324 1861.093407 1482.647971 1552.717609 1673.539371 1663.326857 1644.69704 0.916448405 0.799614484 0.693751782 1.00708476 1.131572175 0.901471782 0.944075152 1.017536562 1.011327203 1 10.68360614 -5.781557211 24.96041876 1.001410829 0.802905863 0.599078809 0.074449382 157.6245073 195565.9441 0.021801129 0.032381782 1.65E-06 5.781557211 -0.198504967 EVGS(ph)IIGK ddPTM_A459_MK2206_30min_R1 2 EVGSIIGK 8 0 Q15365;H3BSP4;C9K0A2;F8WC71;F8VTZ0;C9IZV9;C9J7A9;C9JSA6;C9J5V4;C9JTY5;C9JZY3;C9J0A4;P57723-2;P57723;H3BRU6;F8VZX2;F8W0G4;J3QT27;E9PFP8;P57721-2;P57721-3;P57721-5;P57721-4;P57721;F8W1G6;Q15366;Q15366-2;Q15366-6;Q15366-3;Q15366-5;Q15366-8;Q15366-4;Q15366-7 Q15365;H3BRU6;Q15366;Q15366-5 PCBP1;PCBP2;PCBP4;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 4;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 1 EVGS(1)IIGK;EVGS(1)IIGK 112.71 0.011056 10740500 6260.8 6629.9 6496.3 5352.1 6700 5858.2 6131.8 5308 5797.2 4654 TRUE FALSE 5728.286083 6198.292305 6055.349256 5764.319669 6433.124813 6189.886221 5722.75881 5261.592716 6399.839685 5230.572656 1.095154672 1.18501218 1.157683805 1.102043705 1.229908317 1.183405074 1.094097948 1.005930528 1.223544745 1 12.35275319 -10.90551804 0.281990952 0.89607866 1.159028542 0.281788593 0.066136151 26.02743931 1.487638485 2.06359632 0.08305062 1.24E-11 10.90551804 0.262949882 EVGS(ph)PPLDPTER ddPTM_A459_MK2206_30min_R1 2 EVGSPPLDPTER 12 0 A0A1B0GV79;A0A1B0GW21;A0A1B0GTE6;A0A0D9SFK7;A0A1B0GUH6;A0A1B0GUA3;Q96EK5 A0A1B0GV79 KIF1BP;KIAA1279 KIF1-binding protein 1 EVGS(0.997)PPLDPT(0.003)ER;EVGS(1)PPLDPTER 131.79 0.0019749 19303400 9001.8 7762.1 8276.6 6448 9536.2 7100.9 8239.4 7933.7 7098.4 7386.2 TRUE FALSE 8236.14964 7256.785879 7714.807452 6944.626077 9156.352961 7502.946822 7689.76466 7864.336497 7836.304082 8301.258219 0.992156782 0.874179033 0.92935399 0.836575118 1.103007848 0.903832482 0.926337244 0.947366808 0.94398992 1 13.01911431 EVGS(ph)PPLDPTER ddPTM_A459_MK2206_30min_R2 2 EVGSPPLDPTER 12 0 A0A1B0GV79;A0A1B0GW21;A0A1B0GTE6;A0A0D9SFK7;A0A1B0GUH6;A0A1B0GUA3;Q96EK5 A0A1B0GV79 KIF1BP;KIAA1279 KIF1-binding protein 1 EVGS(0.983)PPLDPT(0.017)ER;EVGS(1)PPLDPTER 122.46 0.0035367 20871100 52762 65194 56411 68191 66039 65113 63968 47481 57923 56391 TRUE FALSE 56801.49929 61956.56076 58291.71458 62619.57717 63445.97704 67590.92084 55568.92476 53686.92973 62961.03784 54550.96629 1.041255603 1.135755514 1.068573456 1.147909587 1.16305872 1.239041679 1.018660686 0.98416093 1.154169067 1 15.73531713 -7.320317419 24.99887832 1.03792767 1.131913223 0.326305581 0.065696732 328.4177704 139440.5405 0.027809279 0.018749016 4.78E-08 7.320317419 0.093985553 EVGVYEALKDDSWLK ddPTM_A459_MK2206_30min_R1 2 EVGVYEALKDDSWLK 15 1 A0A5K1VW95;P40925;P40925-3;B9A041;P40925-2;B8ZZ51 A0A5K1VW95 MDH1 "Malate dehydrogenase, cytoplasmic" 0 ; 129.77 0.0024083 11831200 2710.4 2691.6 3012.5 2641.3 2912.7 2563 2548.8 2654.3 2612.2 2354.6 FALSE TRUE 2479.866247 2516.376351 2808.019893 2844.733384 2796.680991 2708.114845 2378.774203 2631.093735 2883.747538 2646.305624 0.937105006 0.950901637 1.061109445 1.074982934 1.056824641 1.023356796 0.898903808 0.994251651 1.089725809 1 11.36976397 -5.156125279 6.361944349 1.022942886 0.941250806 0.28301036 0.051535373 0.338244497 17.34881218 0.01448024 0.039469236 6.98E-06 5.156125279 -0.08169208 EVHDELEDLPSPPPPLS(ph)PPPTTSPHK ddPTM_A459_MK2206_30min_R1 2 EVHDELEDLPSPPPPLSPPPTTSPHK 26 0 H0YJ30;G3V582;F5H039;Q9NQX3;Q9NQX3-2 H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase 1 EVHDELEDLPSPPPPLS(0.99)PPPT(0.003)T(0.003)S(0.004)PHK;EVHDELEDLPSPPPPLS(1)PPPTTSPHK 130.07 3.19E-09 20491600 4540.9 3218.7 4185 2937.8 5981.2 4389.5 4578.5 4382.4 3213.9 3140.4 TRUE FALSE 4154.67261 3009.162045 3900.93386 3164.069865 5742.956139 4638.029697 4273.076619 4344.085139 3547.996406 3529.456461 1.177142332 0.852585116 1.105250597 0.896475109 1.6271503 1.314091773 1.21068971 1.230808536 1.005252918 1 11.78523031 EVHDELEDLPSPPPPLS(ph)PPPTTSPHK ddPTM_A459_MK2206_30min_R2 2 EVHDELEDLPSPPPPLSPPPTTSPHK 26 0 H0YJ30;G3V582;F5H039;Q9NQX3;Q9NQX3-2 H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase 1 EVHDELEDLPS(0.008)PPPPLS(0.903)PPPT(0.05)T(0.02)S(0.02)PHK;EVHDELEDLPSPPPPLS(0.999)PPPTTSPHK 102.9 4.01E-07 11238100 17078.6 26619 19726.7 32433.7 29337.3 33976 26220 23897.3 26182.8 24131.6 TRUE FALSE 18386.15075 25297.13917 20384.37833 29783.76296 28185.37019 35268.98049 22777.2825 27020.75916 28460.13262 23344.18787 0.787611497 1.083658995 0.873210002 1.275853464 1.207382769 1.510824908 0.975715353 1.157494076 1.219152826 1 14.51077578 -5.759704388 24.99967596 1.203778647 0.931710011 0.397288694 0.155781131 46.94400071 676397.6197 0.042436545 0.068889075 1.74E-06 5.759704388 -0.272068637 EVIEIEDAS(ph)PTK ddPTM_A459_MK2206_30min_R1 1 EVIEIEDASPTK 12 0 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 EVIEIEDAS(0.987)PT(0.013)K 225.33 4.83E-09 11382000 2617.3 3265.6 2930.1 1766.3 1859.6 2003.6 2682.3 1982.4 3673.8 4979.6 TRUE FALSE 2394.684891 3053.008846 2731.212976 1902.340732 1785.528194 2117.042101 2503.368661 1965.068086 4055.704657 5596.510442 0.427888935 0.545520084 0.488020706 0.339915516 0.319043127 0.378278951 0.447308852 0.351123813 0.724684551 1 12.45031184 -8.496712516 3.124825495 0.998101031 0.414089801 0.886388279 0.067914733 0.074818898 1.715938295 0.073073417 0.01945939 3.19E-09 8.496712516 -0.584011229 down EVIEIEDAS(ph)PTK ddPTM_A459_MK2206_30min_R2 2 EVIEIEDASPTK 12 0 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 EVIEIEDAS(0.998)PT(0.002)K;EVIEIEDAS(0.988)PT(0.012)K 194.86 0.00016483 17073200 117831 75444 86361 77334 69319 54627 105715 72140 53596 98016 TRUE FALSE 126852.232 71697.56067 89240.23264 71015.56482 66597.18776 56705.86876 91834.49351 81568.94569 58257.6832 94817.74595 1.337853275 0.756161834 0.941176483 0.748969131 0.702370501 0.598051221 0.968536982 0.860270879 0.614417508 1 16.53286948 -4.759057302 24.98868657 0.793413688 1.337853989 0.589977485 0.134724848 44.28029816 464411.4152 0.033109543 0.216142385 1.74E-05 4.759057302 0.544440301 EVIEIEDAS(ph)PTKCPITTK ddPTM_A459_MK2206_30min_R1 3 EVIEIEDASPTKCPITTK 18 1 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 EVIEIEDAS(0.966)PT(0.033)KCPIT(0.001)TK;EVIEIEDAS(0.625)PT(0.349)KCPIT(0.019)T(0.007)K;EVIEIEDAS(0.953)PT(0.04)KCPIT(0.003)T(0.004)K 78.324 0.0071646 127790000 13559 13043.6 13616.7 11494.3 10670.2 9518.3 11936.5 11205.5 13368.7 12472.1 TRUE FALSE 12405.73585 12194.45927 12692.43634 12379.59298 10245.18334 10057.21792 11140.23786 11107.53149 14758.42421 14017.23791 0.885034265 0.869961639 0.905487688 0.883169213 0.730898869 0.717489279 0.794752714 0.792419417 1.052876772 1 13.77491447 -8.261855302 24.99987442 1.026438409 0.821313286 0.629305569 0.062634659 26.98607816 1621763.664 0.057071864 0.018232689 5.47E-09 8.261855302 -0.205125123 EVIEIEDAS(ph)PTKCPITTK ddPTM_A459_MK2206_30min_R2 3 EVIEIEDASPTKCPITTK 18 1 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 EVIEIEDAS(0.97)PT(0.029)KCPIT(0.001)TK;EVIEIEDAS(0.954)PT(0.039)KCPIT(0.005)T(0.002)K;EVIEIEDAS(0.937)PT(0.063)KCPITTK 91.067 0.0030297 141974000 214962 202789 208111 199904 212496 153448 254278 171384 157133 224378 TRUE FALSE 231419.656 192718.7931 215049.3169 183571.2037 204152.3393 159287.5712 220890.9932 193784.4772 170800.1443 217056.5642 1.066172114 0.8878736 0.990752423 0.845729796 0.940549023 0.733852817 1.017665575 0.892783307 0.786892324 1 17.72771153 -1.632247602 1.065064883 0.890507621 199.9843572 0.229773363 0.088743532 2867.016702 3.721180084 0.025799784 1393979.961 0.023321281 1.632247602 199.0938496 EVIEIEDASPT(ph)K ddPTM_A459_MK2206_30min_R1 1 EVIEIEDASPTK 12 0 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 EVIEIEDAS(0.358)PT(0.642)K 215.09 2.22E-06 7879800 2342.8 2725.6 2561.1 1791.5 1623.2 1676.5 2722.5 1767 3544.5 4107.5 TRUE FALSE 2143.532557 2548.162945 2387.259668 1929.48164 1558.544507 1771.421981 2540.886992 1751.551305 3912.963459 4616.36811 0.464333109 0.551984349 0.517129399 0.417965291 0.337612701 0.383726327 0.550408228 0.379421932 0.847628128 1 12.17254255 -8.391872663 3.760529526 0.993517401 0.452293334 0.877395241 0.071634771 0.074993117 1.765329925 0.073746226 0.019531191 4.06E-09 8.391872663 -0.541224067 down EVIGGLCSLANIPLT(ph)PETQR ddPTM_A459_MK2206_30min_R2 2 EVIGGLCSLANIPLTPETQR 20 0 Q01664 Q01664 TFAP4 Transcription factor AP-4 1 EVIGGLCS(0.001)LANIPLT(0.995)PET(0.004)QR;EVIGGLCS(0.001)LANIPLT(0.499)PET(0.499)QR 127.67 0.00046601 8193400 40097 42702 35667 44097 39411 41273 43209 35200 35795 45973 TRUE FALSE 43166.85715 40581.48077 36856.11998 40494.13404 37863.52612 42843.67294 37535.6064 39800.76086 38908.3844 44472.90478 0.970632734 0.912498992 0.828732015 0.910534948 0.851384147 0.963365743 0.844010675 0.894944035 0.874878414 1 15.44063902 -10.69469855 3.626433851 1.000105265 0.892894578 0.330041381 0.045014765 45911114.51 65794224.6 54048.27411 0.01123728 2.02E-11 10.69469855 -0.107210686 EVLAS(ph)PDRLWGSR ddPTM_A459_MK2206_30min_R1 1 EVLASPDRLWGSR 13 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EVLAS(0.703)PDRLWGS(0.297)R 66.436 0.040097 10536000 1378.3 1231.2 1125.2 1003.2 1249.6 1272.1 1307.6 984.78 966.07 980.78 TRUE FALSE 1261.068347 1151.048656 1048.824559 1080.466638 1199.825786 1344.125203 1220.37239 976.1701723 1066.496434 1102.286431 1.144047783 1.044237345 0.951499111 0.98020497 1.088488212 1.219397395 1.107128198 0.885586672 0.967531128 1 10.10628344 -7.754588088 24.98524987 0.944919169 1.072647548 0.356677892 0.076921152 189.752533 691995.7281 0.041771729 0.02342955 1.76E-08 7.754588088 0.127728379 EVLDEDT(ph)DEEKETLK ddPTM_A459_MK2206_30min_R2 2 EVLDEDTDEEKETLK 15 1 Q9Y3P9 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 EVLDEDT(1)DEEKETLK;EVLDEDT(0.972)DEEKET(0.028)LK 89.311 0.023154 24609000 63512 57179 61844 39522 50813 27144 54605 50104 39202 64393 TRUE FALSE 68374.52755 54339.57401 63905.84809 36292.92618 48817.82631 28176.98394 47435.29791 56652.76483 42611.7191 62291.86168 1.097647842 0.872338256 1.025910069 0.582627091 0.783695093 0.452338125 0.761500726 0.909472976 0.68406559 1 15.92675607 -5.746747847 24.96663965 0.726171066 0.986002765 0.370550238 0.154103284 249.8831718 424645.3557 0.041152087 0.070889467 1.79E-06 5.746747847 0.259831699 EVLEEER ddPTM_A459_MK2206_30min_R2 1 EVLEEER 7 0 A0A1B0GVM6 A0A1B0GVM6 0 101.69 0.027791 0 9901.8 12952 10925 11912 13052 11322 9905.8 10040 13111 10467 FALSE TRUE 10659.88942 12308.82251 11289.23405 10938.7515 12539.5129 11752.86664 8605.156561 11352.26247 14251.37108 10125.46265 1.05278048 1.215630628 1.114935133 1.080321154 1.238413822 1.160723915 0.849853173 1.121159879 1.40747851 1 13.30570021 -3.513107822 15.22215046 1.125136035 1.130460983 0 0.141706792 0 0 0.03231803 0 0.000306826 3.513107822 0.005324948 EVLHGNQR ddPTM_A459_MK2206_30min_R2 1 EVLHGNQR 8 0 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 89.752 0.041066 3782700 4676.4 3138.3 3247.6 971.51 3111.8 3208.9 3646.3 10399 7807.8 2736.1 FALSE TRUE 5034.42878 2982.456586 3355.873363 892.1345253 2989.615096 3331.016938 3167.53643 11758.18501 8486.908331 2646.821281 1.902066005 1.126806939 1.26788816 0.337058846 1.129511508 1.258497112 1.196732266 4.442379653 3.206453111 1 11.37004507 -7.70114915 12.54458324 3.117597565 1.144289874 0.442695652 0.866283465 0.630680934 129.9680691 0.388481051 0.224140417 1.99E-08 7.70114915 -1.973307691 EVLS(ph)PLK ddPTM_A459_MK2206_30min_R1 1 EVLSPLK 7 0 Q8WVV4-3;Q8WVV4;Q8WVV4-1 Q8WVV4-3 POF1B Protein POF1B 1 EVLS(1)PLK 111.46 0.014982 10739000 6890 6954 7155.6 5326.3 4582.7 3443.5 4787.8 4497.7 4640.7 3729.1 TRUE FALSE 6303.969319 6501.293336 6669.897809 5736.532549 4400.161355 3638.467994 4468.414598 4458.377083 5123.117372 4191.089061 1.50413633 1.55121813 1.591447405 1.368745084 1.049884956 0.868143802 1.06617028 1.063775314 1.222383323 1 12.03310946 -6.113219722 2.964010991 1.038997816 1.545817636 0.880704127 0.084534136 0.089010369 1.501384612 0.028043528 0.038538221 7.71E-07 6.113219722 0.50681982 EVLS(ph)PLK ddPTM_A459_MK2206_30min_R2 3 EVLSPLK 7 0 Q8WVV4-3;Q8WVV4;Q8WVV4-1 Q8WVV4-3 POF1B Protein POF1B 1 EVLS(1)PLK;EVLS(1)PLK;EVLS(1)PLK 110.76 0.01528 16460800 127191 126773 112467 103835 96654 79960 114533 83568 67481 102472 TRUE FALSE 136928.8408 120477.6372 116216.5936 95351.34835 92858.87831 83002.93383 99494.67952 94490.62453 73350.3754 99128.34703 1.381328801 1.215370182 1.172385066 0.961897895 0.936754027 0.837327932 1.003695537 0.953214972 0.739953581 1 16.59701005 -5.431788489 1.101446334 0.903616128 1.388474664 0.806092254 0.078670611 0.303859815 0.590269629 0.026827425 0.13319991 3.70E-06 5.431788489 0.484858536 EVLT(ph)PTSTSDNETR ddPTM_A459_MK2206_30min_R2 1 EVLTPTSTSDNETR 14 0 Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150;H7C183 Q70CQ2-3 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 EVLT(0.412)PT(0.412)S(0.131)T(0.042)S(0.002)DNET(0.001)R 103.66 0.015747 8888100 17173 19648 14806 16800 24728 20174 25182 12769 16773 17764 TRUE FALSE 18487.77808 18672.30889 15299.62465 15427.38626 23757.05447 20941.73571 21875.57315 14437.95214 18231.88522 17184.36213 1.075848957 1.086587256 0.890322523 0.897757283 1.382481019 1.218650744 1.272993026 0.840179695 1.060957927 1 14.06880868 -4.42561994 15.73448988 1.076900227 1.040364617 0 0.167668393 53213095.3 99379662.43 0.044792419 67630014.59 3.75E-05 4.42561994 -0.036535611 EVLTPT(ph)STSDNETR ddPTM_A459_MK2206_30min_R2 2 EVLTPTSTSDNETR 14 0 Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150;H7C183 Q70CQ2-3 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 EVLT(0.122)PT(0.265)S(0.265)T(0.174)S(0.174)DNETR;EVLT(0.189)PT(0.286)S(0.165)T(0.18)S(0.18)DNETR 122.1 0.004266 17530500 68432 76840 71724 77593 83965 91040 89369 65836 75558 89008 TRUE FALSE 73671.20654 73024.23734 74115.24236 71253.40369 80668.11221 94504.59099 77634.74295 74440.99125 82129.89826 86103.67625 0.855610466 0.848096626 0.860767456 0.827530331 0.93687187 1.097567434 0.901642605 0.864550673 0.953848916 1 16.39378722 -6.341555732 5.570110551 0.957534548 0.849136293 0.467147519 0.058333989 0.231290422 12.23084472 0.019603563 0.022350407 4.55E-07 6.341555732 -0.108398255 EVLTPTST(ph)SDNETR ddPTM_A459_MK2206_30min_R1 1 EVLTPTSTSDNETR 14 0 Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150;H7C183 Q70CQ2-3 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 EVLT(0.002)PT(0.084)S(0.084)T(0.747)S(0.084)DNETR 153.14 0.00086328 7102500 2135.9 1952.5 1982.9 1619.1 1939.5 1922.1 2303.3 2081.2 1782.4 1574.2 TRUE FALSE 1954.230489 1825.391895 1848.306273 1743.803363 1862.245608 2030.927641 2149.65106 2063.004288 1967.686858 1769.223781 1.104569422 1.031747321 1.044698976 0.985631881 1.052577762 1.147920158 1.215024964 1.166050508 1.112175226 1 10.78890082 -6.728289758 5.580533499 1.144271662 1.039054349 0.322734264 0.058860748 0.177398547 14.49719167 0.019497496 0.018957998 1.87E-07 6.728289758 -0.105217313 EVLTPTSTS(ph)DNETR ddPTM_A459_MK2206_30min_R1 1 EVLTPTSTSDNETR 14 0 Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150;H7C183 Q70CQ2-3 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 EVLT(0.001)PT(0.036)S(0.036)T(0.21)S(0.717)DNETR 180.95 7.43E-05 6084900 2331.2 2216.9 2158.5 1670.6 2379.7 2224.6 2301.5 1960.8 1915.4 1753.8 TRUE FALSE 2132.919198 2072.579407 2011.987034 1799.269901 2284.91151 2350.55493 2147.971134 1943.656932 2114.512684 1971.073985 1.082110167 1.05149752 1.020756729 0.912837324 1.159221586 1.192524963 1.08974658 0.986090298 1.07277185 1 10.94476621 -4.75335311 22.78635802 1.05679744 1.082110295 0.010474146 0.077801337 885.8137004 2495487.005 0.020917806 0.21198863 1.76E-05 4.75335311 0.025312854 EVLYDS(ph)EGLSGEER ddPTM_A459_MK2206_30min_R1 1 EVLYDSEGLSGEER 14 0 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 EVLYDS(1)EGLSGEER 151.38 0.00012318 0 706.46 541.62 523.81 537.67 972.79 634.4 743.9 536.62 653.82 607.69 TRUE FALSE 646.3718672 506.3604396 488.2552366 579.0814366 934.0417144 670.3191798 694.2757883 531.9283879 721.7869287 682.975225 0.946406024 0.741403818 0.714894507 0.84788059 1.367607023 0.981469247 1.016546081 0.778839947 1.056827396 1 9.415689435 -6.020467974 24.99143314 1.027100548 0.792690945 0.35635967 0.146185055 863.7772266 1054673.528 0.044409768 0.058066022 9.54E-07 6.020467974 -0.234409603 EVLYDS(ph)EGLSGEER ddPTM_A459_MK2206_30min_R2 2 EVLYDSEGLSGEER 14 0 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 EVLYDS(1)EGLSGEER;EVLYDS(0.998)EGLS(0.002)GEER 205.26 4.84E-10 5471500 26460 29606 26662 33067 31022 34226 36470 25340 29072 34309 TRUE FALSE 28485.79794 28135.80909 27550.89777 30365.32032 29803.92041 35528.49441 31681.44519 28652.02501 31600.63001 33189.50014 0.858277402 0.847732234 0.830108849 0.914907431 0.897992446 1.070473923 0.954562288 0.863285825 0.952127326 1 15.01843928 -6.090610037 2.019860487 0.957206639 0.846388296 0.475849154 0.05225606 0.319282751 2.579883336 0.018159618 0.026821327 8.12E-07 6.090610037 -0.110818343 EVMESAVGNSSGS(ph)GQNEESPR ddPTM_A459_MK2206_30min_R2 1 EVMESAVGNSSGSGQNEESPR 21 0 Q9NVF7 Q9NVF7 FBXO28 F-box only protein 28 1 EVMES(0.001)AVGNS(0.032)S(0.032)GS(0.884)GQNEES(0.05)PR 119.37 7.46E-05 22320000 38044 47006 41538 43186 47615 45664 45719 35427 42844 45981 TRUE FALSE 40956.67789 44671.75039 42922.85619 39657.56565 45745.39585 47401.77552 39716.04038 40057.43054 46570.49368 44480.64374 0.920775296 1.0042964 0.964978305 0.891569058 1.028433764 1.065671976 0.892883669 0.900558696 1.046983356 1 15.44089005 -4.588357727 0.004333054 1.917622285 2.84E-05 0.03902806 0.061931597 205945.425 131.7604157 28192.2579 30142.04552 2.58E-05 4.588357727 -1.91759386 EVMESAVGNSSGSGQNEES(ph)PR ddPTM_A459_MK2206_30min_R1 2 EVMESAVGNSSGSGQNEESPR 21 0 Q9NVF7 Q9NVF7 FBXO28 F-box only protein 28 1 EVMESAVGNSSGSGQNEES(1)PR;EVMESAVGNSSGSGQNEES(1)PR 388.39 3.93E-295 28148000 4328.7 4540.1 4576.8 3393.3 4534 4123.2 5200.5 3920.6 3833.5 3572.7 TRUE FALSE 3960.521334 4244.538665 4266.139568 3654.652554 4353.401179 4356.652021 4853.584134 3886.322608 4232.006043 4015.313049 0.986354311 1.057087857 1.062467488 0.910178736 1.084199694 1.085009305 1.208768551 0.967875371 1.05396665 1 11.97129675 EVMESAVGNSSGSGQNEES(ph)PR ddPTM_A459_MK2206_30min_R2 4 EVMESAVGNSSGSGQNEESPR 21 0 Q9NVF7 Q9NVF7 FBXO28 F-box only protein 28 1 EVMESAVGNS(0.005)S(0.002)GS(0.01)GQNEES(0.983)PR;EVMESAVGNSSGSGQNEES(1)PR;EVMESAVGNSSGSGQNEES(1)PR;EVMESAVGNS(0.003)S(0.006)GS(0.115)GQNEES(0.877)PR 295.9 1.35E-175 22906000 66157.9 87429 76465 94456 91671 93004 89765 72507.3 79237 93534 TRUE FALSE 71222.99969 83087.40299 79014.30494 86738.64265 88071.53593 96543.33239 77978.74767 81984.25306 86128.89103 90481.99324 0.787151091 0.91827556 0.873259995 0.958628778 0.973359812 1.066989452 0.861815096 0.906083632 0.951889851 1 16.46534309 -3.709025869 0.854936064 0.954086747 3.15E-17 0.447692195 0.055528678 12.45387421 1.75686344 0.020165175 17.14026319 0.000195422 3.709025869 -0.954086747 EVMS(ph)PLQAMSSYTVAGR ddPTM_A459_MK2206_30min_R2 4 EVMSPLQAMSSYTVAGR 17 0 Q9BYT8 Q9BYT8 NLN "Neurolysin, mitochondrial" 1 EVMS(0.984)PLQAMS(0.009)S(0.003)YT(0.004)VAGR;EVMS(0.989)PLQAMS(0.007)S(0.002)YT(0.002)VAGR;EVMS(1)PLQAMSSYTVAGR;EVMS(0.999)PLQAMS(0.001)SYTVAGR 127.91 0.00085899 1295100 20261 23941.1 18001.9 24507.2 26335.5 23079.1 26143.8 18105.2 18840 19527.6 TRUE FALSE 21812.19774 22752.21979 18602.07436 22504.88337 25301.43594 23957.39132 22711.08766 20471.6118 20478.66915 18890.41601 1.154670057 1.204431907 0.984736088 1.191338685 1.3393795 1.268229948 1.2022545 1.083703598 1.084077192 1 14.20536685 -7.862490126 3.620236482 1.052705456 1.193378887 0.342800192 0.087238861 0.318770403 7.921917564 0.059373441 0.026273187 1.37E-08 7.862490126 0.14067343 EVMS(ph)PTGSAR ddPTM_A459_MK2206_30min_R1 1 EVMSPTGSAR 10 0 H0YHB7;O43347 H0YHB7 MSI1 RNA-binding protein Musashi homolog 1 1 EVMS(0.954)PT(0.032)GS(0.015)AR 116.84 0.006211 4634500 1981 1885.5 1794.5 1653.7 2043.9 1929 1847.1 1614.2 1544.6 1524.3 TRUE FALSE 1812.505547 1762.753607 1672.69434 1781.068261 1962.487135 2038.218313 1723.883329 1600.08722 1705.166697 1713.141792 1.058000894 1.02895955 0.976389898 1.039650232 1.145548573 1.189754592 1.006270081 0.934007463 0.995344755 1 10.74242885 -7.511306535 24.72890357 0.972833401 1.070895174 0.364586812 0.058553636 596.8479438 1275426.342 0.029248387 0.018449772 3.08E-08 7.511306535 0.098061773 EVMS(ph)PTGSAR ddPTM_A459_MK2206_30min_R2 1 EVMSPTGSAR 10 0 H0YHB7;O43347 H0YHB7 MSI1 RNA-binding protein Musashi homolog 1 1 EVMS(1)PTGSAR 90.697 0.029073 6869000 18878 33551 30081 45840 29645 53502 24174 29303 39468 30201 TRUE FALSE 20323.31419 31884.90613 31083.88553 42094.72537 28480.98835 55538.0561 20999.92476 33133.00271 42900.8553 29215.54384 0.695633609 1.091367879 1.063950262 1.440833195 0.974857374 1.900976288 0.718792875 1.134088172 1.468425696 1 14.83444852 -4.429186751 1.286486987 1.230004821 1.08E-10 0.203029545 0.310099536 4.825601529 3.848311504 0.087530929 9.737581898 3.72E-05 4.429186751 -1.230004821 EVNS(ph)QEEEEEELLRK ddPTM_A459_MK2206_30min_R1 2 EVNSQEEEEEELLRK 15 1 Q96RL1-2;Q96RL1-3;Q96RL1;D6RC40;D6RCQ3;Q96RL1-5 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 EVNS(1)QEEEEEELLRK;EVNS(1)QEEEEEELLRK 138.46 0.00020407 12217200 2765.5 2679.88 3028.8 2780.34 3158.7 2740.9 2763.6 2636.4 2359.68 1977.23 TRUE FALSE 2530.279703 2505.419325 2823.213495 2994.482269 3032.88229 2896.087389 2579.245286 2613.350233 2604.97718 2222.18418 1.138645359 1.127457997 1.270467822 1.34754009 1.364820395 1.303261636 1.160680249 1.176027737 1.172259799 1 11.11776268 -8.593488782 0.880387454 1.00434388 1.254424642 0.471846258 0.078308052 0.704715512 1.192062106 0.086902367 0.030271496 2.55E-09 8.593488782 0.250080762 EVPIPEHIDIYHLTR ddPTM_A459_MK2206_30min_R1 1 EVPIPEHIDIYHLTR 15 0 C9JHK9;C9JZV3;Q9UG63;Q9UG63-2 C9JHK9 ABCF2 ATP-binding cassette sub-family F member 2 0 81.703 0.015105 3736900 4657.1 4013.1 4687.3 3758.7 5313.6 4830.9 5249.6 3831.4 3396.1 3458.4 FALSE TRUE 4260.98919 3751.846461 4369.139136 4048.195725 5101.94806 5104.421383 4899.408762 3797.902474 3749.136748 3886.852702 1.096256925 0.965265923 1.12408148 1.04150994 1.312616776 1.313253106 1.260507958 0.977115102 0.964568775 1 11.92438672 -7.784370246 24.40810852 0.97813121 1.15758474 0.367998098 0.107176234 234.56474 249671.039 0.067300831 0.032369084 1.64E-08 7.784370246 0.17945353 EVPPPPAEES(ph)EEEDDDGLPK ddPTM_A459_MK2206_30min_R1 2 EVPPPPAEESEEEDDDGLPK 20 0 Q9H6X2-5;Q9H6X2 Q9H6X2-5 ANTXR1 Anthrax toxin receptor 1 1 EVPPPPAEES(1)EEEDDDGLPK;EVPPPPAEES(1)EEEDDDGLPK 98.376 0.00058296 6165800 2931.5 3940.6 3417.2 2799.7 2576.6 2545.6 3518.4 3099.7 5401.3 5444.1 TRUE FALSE 2682.160531 3684.066224 3185.249985 3015.333379 2473.968566 2689.729672 3283.693956 3072.59965 5962.784464 6118.556209 0.438364941 0.602113652 0.520588498 0.492817795 0.404338619 0.439602021 0.53667791 0.502177237 0.974541094 1 12.57897555 -8.266152447 5.504238444 0.996924893 0.492411032 0.932727546 0.053218601 0.039005989 4.428224571 0.047679624 0.014484847 5.42E-09 8.266152447 -0.504513861 down EVPPPPAEES(ph)EEEDDDGLPK ddPTM_A459_MK2206_30min_R2 3 EVPPPPAEESEEEDDDGLPK 20 0 Q9H6X2-5;Q9H6X2 Q9H6X2-5 ANTXR1 Anthrax toxin receptor 1 1 EVPPPPAEES(1)EEEDDDGLPK;EVPPPPAEES(1)EEEDDDGLPK;EVPPPPAEES(1)EEEDDDGLPK 99.93 0.0005987 4095500 227980 117292 157986 107247 115893 94568 188857 108145 104577 209387 TRUE FALSE 245434.3241 111467.4498 163253.1744 98484.57703 111342.4585 98166.85151 164059.849 122279.9228 113672.9184 202554.7193 1.211693931 0.550307839 0.805970727 0.486212207 0.549690764 0.484643615 0.809953229 0.603688343 0.5611961 1 17.62795217 -4.756353786 24.99636998 0.63422334 1.211694825 0.520879179 0.16090529 118.6396443 583064.1335 0.037563819 0.306627822 1.75E-05 4.756353786 0.577471485 EVPSKEEPS(ph)PVK ddPTM_A459_MK2206_30min_R1 1 EVPSKEEPSPVK 12 1 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EVPSKEEPS(1)PVK 73.499 0.029718 68086000 6323.8 7547.3 6990.6 5517.5 4754 4540.6 6613.6 6132.8 7780.4 9693.1 TRUE FALSE 5785.927602 7055.969398 6516.097549 5942.458806 4564.638113 4797.684848 6172.418811 6079.181576 8589.200422 10893.95441 0.531113624 0.647695881 0.598138867 0.545482254 0.419006537 0.440398837 0.56659121 0.558032588 0.788437339 1 13.41124011 -8.472826269 2.045668009 0.99913709 0.533941343 0.847623626 0.063630427 0.127313297 1.181146574 0.069534561 0.019480235 3.37E-09 8.472826269 -0.465195747 EVPSKEEPS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 EVPSKEEPSPVK 12 1 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EVPS(0.007)KEEPS(0.993)PVK;EVPS(0.002)KEEPS(0.998)PVK 68.536 0.037938 220701000 606660 440390 470460 442590 398970 344380 541540 445130 344750 516540 TRUE FALSE 653106.356 418520.873 486144.9016 406428.9812 383304.4331 357485.6222 470435.1475 503310.0194 374735.7318 499685.3421 1.30703525 0.837568841 0.972902066 0.813369829 0.767091609 0.71542147 0.941462772 1.00725392 0.749943415 1 18.93066037 -4.759399705 24.94351393 0.86351696 1.307035832 0.624404422 0.102296491 34.99142859 427805.1945 0.025941825 0.165258267 1.74E-05 4.759399705 0.443518872 EVPSKEEPS(ph)PVKAEVAEK ddPTM_A459_MK2206_30min_R1 3 EVPSKEEPSPVKAEVAEK 18 2 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EVPS(0.001)KEEPS(0.999)PVKAEVAEK;EVPS(0.054)KEEPS(0.946)PVKAEVAEK;EVPS(0.001)KEEPS(0.999)PVKAEVAEK 101.05 0.00298 912195000 11272.4 13525.9 14779.4 13063.1 9169.5 7942.2 9963.4 11339.1 11539.3 9004.6 TRUE FALSE 10313.62319 12645.36145 13776.21551 14069.22223 8804.259398 8391.8805 9298.759765 11239.96344 12738.85153 10120.15783 1.019116832 1.249522158 1.361264887 1.390217669 0.869972539 0.829224271 0.918835449 1.110651003 1.258760164 1 13.30494417 -6.262325367 24.99745567 0.99105205 1.262225121 0.420972895 0.147502318 84.86481562 2394395.739 0.049314333 0.059231484 5.47E-07 6.262325367 0.271173071 EVPSKEEPS(ph)PVKAEVAEK ddPTM_A459_MK2206_30min_R2 4 EVPSKEEPSPVKAEVAEK 18 2 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK 140.73 0.00035681 299857000 215338 238718 241741 232875 231307 147920 288477 201444 181213 263633 TRUE FALSE 231824.4428 226863.6112 249800.5243 213848.3676 222224.725 153549.1993 250599.6234 227773.4225 196974.5792 255030.6768 0.909006108 0.889554206 0.979492065 0.838520174 0.871364683 0.602081291 0.98262541 0.893121664 0.772356415 1 17.96031127 -5.789548999 24.70012384 0.842891712 0.922371146 0.088203898 0.107258873 427.5724537 375709.2234 0.030022108 0.044540875 1.62E-06 5.789548999 0.079479434 EVPWS(ph)PSAEK ddPTM_A459_MK2206_30min_R1 1 EVPWSPSAEK 10 0 Q5JSZ5;Q5JT00;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 EVPWS(0.9)PS(0.1)AEK 154.67 0.00054837 69906000 5122 5651.1 5154.2 4625.6 4936.7 4329.8 5059.9 4469 4146 4699 TRUE FALSE 4686.347003 5283.212363 4804.347264 4981.864513 4740.060785 4574.949534 4722.363303 4429.928004 4576.991537 5281.147596 0.887372852 1.000390969 0.90971653 0.943329915 0.897543706 0.866279431 0.894192639 0.838819201 0.86666609 1 12.36663575 -6.372226542 3.806431314 0.88303171 0.938140957 0.129513481 0.048616907 0.363614882 9.416311344 0.014722674 0.016884658 4.24E-07 6.372226542 0.055109247 EVPWS(ph)PSAEK ddPTM_A459_MK2206_30min_R2 4 EVPWSPSAEK 10 0 Q5JSZ5;Q5JT00;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 EVPWS(0.985)PS(0.015)AEK;EVPWS(0.993)PS(0.007)AEK;EVPWS(0.996)PS(0.004)AEK;EVPWS(0.989)PS(0.011)AEK 182.41 0.00014953 111597000 518084 564747 550185 593140 540832 506849 561365 451992 464502 549274 TRUE FALSE 557748.9094 536702.4852 568527.8933 544678.5646 519596.2182 526137.4939 487657.1012 511068.9063 504903.5443 531351.2344 1.049680274 1.010071024 1.069966261 1.02508196 0.977877126 0.99018777 0.91776789 0.961828774 0.950225598 1 19.0193063 -6.385209834 1.75622582 0.957444136 1.041447004 0.670237007 0.025131186 0.203212017 1.245224621 0.009012588 0.010898978 4.12E-07 6.385209834 0.084002868 EVQAEQPSSS(ph)SPRR ddPTM_A459_MK2206_30min_R1 2 EVQAEQPSSSSPRR 14 1 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 "RNA-binding motif protein, X-linked 2" 1 EVQAEQPS(0.014)S(0.098)S(0.51)S(0.377)PRR;EVQAEQPS(0.021)S(0.066)S(0.456)S(0.456)PRR 135.57 0.0010815 7182400 3351.9 3089.7 2982.2 3099.2 4117.2 2864 3448.5 3127.9 2599.3 2340.2 TRUE FALSE 3066.803303 2888.559968 2779.776573 3337.900921 3953.203206 3026.157205 3218.456857 3100.5531 2869.506537 2630.121644 1.166030975 1.098260978 1.056900383 1.269105149 1.50304957 1.150576899 1.223691256 1.178863003 1.091016662 1 11.36091381 -8.42912102 1.799629865 1.001063199 1.211221329 0.259372114 0.114506018 0.522232133 3.613215184 0.119866809 0.034460333 3.72E-09 8.42912102 0.21015813 EVQAEQPSSS(ph)SPRR ddPTM_A459_MK2206_30min_R2 1 EVQAEQPSSSSPRR 14 1 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 "RNA-binding motif protein, X-linked 2" 1 EVQAEQPS(0.018)S(0.028)S(0.477)S(0.477)PRR 113.86 0.0016233 6116200 13711 20317 19642 22315 21739 21583 24160 14799 23489 21672 TRUE FALSE 14760.7247 19308.08732 20296.85448 20491.79312 20885.41763 22404.35619 20987.76298 16733.28011 25532.03076 20964.84441 0.704070319 0.920974511 0.968137615 0.977435974 0.99621143 1.068663127 1.00109319 0.798159041 1.217849761 1 14.3556845 -4.204056163 1.177056079 1.002092027 4.86E-09 0.469345091 0.096696995 4.582453938 2.077732879 0.02770542 7.852960749 6.25E-05 4.204056163 -1.002092022 EVQAEQPSSSS(ph)PR ddPTM_A459_MK2206_30min_R1 4 EVQAEQPSSSSPR 13 0 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 "RNA-binding motif protein, X-linked 2" 1 EVQAEQPSSS(0.006)S(0.994)PR;EVQAEQPSSS(0.002)S(0.998)PR;EVQAEQPSSS(0.003)S(0.997)PR;EVQAEQPSSS(0.006)S(0.994)PR 285.04 4.10E-49 373004000 36234.8 33832.6 33358.9 30290 35856.4 32666.6 36039.8 31289.9 29524.4 26939.4 TRUE FALSE 33152.83998 31630.09159 31094.59081 32622.94105 34428.16366 34516.15466 33635.6507 31016.3357 32593.56703 30276.85625 1.09498951 1.044695371 1.027008569 1.077487728 1.137111574 1.140017787 1.110936037 1.024423918 1.076517547 1 14.88592779 -8.643375721 1.145114279 1.002409529 1.086169513 0.296305337 0.038588574 0.931797966 2.562444411 0.041604429 0.013065713 2.27E-09 8.643375721 0.083759984 EVQAEQPSSSS(ph)PR ddPTM_A459_MK2206_30min_R2 7 EVQAEQPSSSSPR 13 0 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 "RNA-binding motif protein, X-linked 2" 1 EVQAEQPSSS(0.008)S(0.992)PR;EVQAEQPSSS(0.002)S(0.998)PR;EVQAEQPSS(0.002)S(0.016)S(0.981)PR;EVQAEQPSSS(0.002)S(0.998)PR;EVQAEQPS(0.003)S(0.021)S(0.318)S(0.659)PR;EVQAEQPSSS(0.049)S(0.951)PR;EVQAEQPSS(0.001)S(0.019)S(0.981)PR 257.48 1.53E-29 617128900 1426858.6 1820815.6 1460557.6 1768341.2 1739437.8 1804404 1875256.6 1367133 1567826.7 1524036.3 TRUE FALSE 1536099.991 1730396.545 1509251.861 1623862.067 1671138.732 1873071.859 1629033.156 1545821.977 1704193.432 1474307.12 1.041913161 1.173701545 1.023702484 1.101440836 1.133507876 1.270476031 1.104948306 1.048507435 1.155928374 1 20.49160566 -4.723641307 23.64223651 1.116225666 1.041911828 0.072160901 0.074814509 9988.389623 6246835.116 0.018693259 4.571734924 1.89E-05 4.723641307 -0.074313838 EVQAEQPSSSS(ph)PRR ddPTM_A459_MK2206_30min_R1 1 EVQAEQPSSSSPRR 14 1 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 "RNA-binding motif protein, X-linked 2" 1 EVQAEQPS(0.079)S(0.079)S(0.207)S(0.635)PRR 94.339 0.023868 3723000 1956.9 1787.8 1734.9 1630.7 1733.8 2136.6 2275.6 1983.7 1419.1 1395.5 TRUE FALSE 1790.455379 1671.413895 1617.139822 1756.296797 1664.739075 2257.572446 2123.798876 1966.35672 1566.620523 1568.385075 1.141591696 1.065691023 1.031085954 1.119812235 1.061435167 1.439424846 1.354131016 1.253746131 0.998874924 1 10.6150641 EVQHNCQLHR ddPTM_A459_MK2206_30min_R1 1 EVQHNCQLHR 10 0 Q9UBP9-4;Q9UBP9;Q9UBP9-2 Q9UBP9-4 GULP1 PTB domain-containing engulfment adapter protein 1 0 78.098 0.030103 828100 436.98 533.9 478.63 292.98 387.5 291.84 513.11 414.42 94.16 410.55 FALSE TRUE 399.8125563 499.143013 446.1419291 315.5453704 372.0650545 308.3637286 478.8813681 410.7967696 103.948269 461.4120335 0.866497896 1.081772855 0.966905708 0.683868966 0.806361836 0.668304479 1.037860596 0.890303546 0.225282961 1 8.849911819 -5.709728675 8.531134162 0.764221349 0.983976527 0.165169446 0.218602841 0.510910549 76.32685923 0.058484067 0.101119779 1.95E-06 5.709728675 0.219755178 EVQHNCQLHR ddPTM_A459_MK2206_30min_R2 2 EVQHNCQLHR 10 0 Q9UBP9-4;Q9UBP9;Q9UBP9-2 Q9UBP9-4 GULP1 PTB domain-containing engulfment adapter protein 1 0 ; 78.655 0.029324 1776770 1055.29 4087.6 3879.2 3986.3 4161.1 4070.1 2763.91 2104.78 2519.16 2236.6 FALSE TRUE 1136.083814 3884.615728 4008.530592 3660.606538 3997.714306 4224.990508 2401.005297 2379.881973 2738.271983 2163.619925 0.525084744 1.795424271 1.852696282 1.691889826 1.847697121 1.952741541 1.109716762 1.099953807 1.265597507 1 11.07923137 -7.284393473 24.02285132 1.127146353 1.644741306 0.277552706 0.38655373 654.2991575 684759.7334 0.162997159 0.109993052 5.20E-08 7.284393473 0.517594953 EVQS(ph)PEGMISLR ddPTM_A459_MK2206_30min_R1 1 EVQSPEGMISLR 12 0 A0A0A0MRW6;Q9H6R4-2;Q9H6R4-4;Q9H6R4 A0A0A0MRW6 NOL6 Nucleolar protein 6 1 EVQS(1)PEGMISLR 104.09 0.010096 6300100 1584.2 1595.4 1483.5 1187.4 1603.1 1226.8 1501.5 1674.6 1328 1479 TRUE FALSE 1449.455471 1491.53917 1382.804153 1278.853754 1539.245132 1296.260356 1401.337675 1659.959149 1466.050352 1662.229686 0.871994697 0.897312317 0.831897159 0.769360435 0.926012299 0.779832274 0.843046955 0.998634041 0.881978204 1 10.69890403 -7.747629299 24.9866933 0.955229585 0.844722398 0.482910905 0.054248577 191.5591405 346590.9037 0.025054334 0.014367892 1.79E-08 7.747629299 -0.110507187 EVQTPQYLNPFDEPEAFVT(ph)IKDSPPQSTKR ddPTM_A459_MK2206_30min_R1 1 EVQTPQYLNPFDEPEAFVTIKDSPPQSTKR 30 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1;B5MC86 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 EVQTPQY(0.002)LNPFDEPEAFVT(0.496)IKDS(0.496)PPQS(0.003)T(0.003)KR 52.402 0.015144 12217000 1630 1957.8 1871.6 1531.2 1800 1693.9 1907.6 2077.8 1428.1 1134.3 TRUE FALSE 1491.359941 1830.346864 1744.561007 1649.133289 1728.302188 1789.807154 1780.347485 2059.634014 1576.556106 1274.825648 1.169854045 1.435762504 1.368470277 1.293614772 1.355716518 1.403962305 1.396541941 1.615620158 1.236683705 1 10.31608423 -8.531518209 24.5108572 0.999999993 1.382031245 0.55136933 0.105761695 662.9276238 1880780.307 0.100746328 0.02601259 2.94E-09 8.531518209 0.382031252 EVQTPQYLNPFDEPEAFVTIKDS(ph)PPQSTK ddPTM_A459_MK2206_30min_R2 1 EVQTPQYLNPFDEPEAFVTIKDSPPQSTK 29 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1;B5MC86 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 EVQTPQYLNPFDEPEAFVT(0.055)IKDS(0.945)PPQSTK 99.378 4.48E-08 7683400 39930 37239 41767 36044 39602 32025 46677 35105 33057 41531 TRUE FALSE 42987.0715 35389.76541 43159.49093 33099.0899 38047.0265 33243.73382 40548.25383 39693.34403 35932.23811 40175.84687 1.069973002 0.880871672 1.074264622 0.823855437 0.947012433 0.827455708 1.009269424 0.987990226 0.89437413 1 15.29404081 -4.745425864 24.89222634 0.937660279 1.069973395 0.204908108 0.077775739 1423.736805 2213002.611 0.018463056 0.468523937 1.80E-05 4.745425864 0.132313116 EVQTPQYLNPFDEPEAFVTIKDS(ph)PPQSTKR ddPTM_A459_MK2206_30min_R1 2 EVQTPQYLNPFDEPEAFVTIKDSPPQSTKR 30 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1;B5MC86 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 EVQTPQYLNPFDEPEAFVT(0.281)IKDS(0.485)PPQS(0.117)T(0.117)KR;EVQTPQYLNPFDEPEAFVT(0.334)IKDS(0.479)PPQS(0.116)T(0.072)KR 60.18 0.0010456 23966000 2713.1 2765.4 2397.1 2242.3 2552.2 1938.66 2021.35 2484.1 2138.33 1555.02 TRUE FALSE 2482.336598 2585.371957 2234.391531 2415.002335 2450.54047 2048.425254 1886.50943 2462.381776 2360.617056 1747.667617 1.420371112 1.479327037 1.278499131 1.381843041 1.402177648 1.172090868 1.079444061 1.408953139 1.350724264 1 10.77121511 -6.75391026 24.91998757 1.220127134 1.390351313 0.380178411 0.120335816 208.8756915 691339.0285 0.041303918 0.040531919 1.76E-07 6.75391026 0.170224179 EVRS(ph)PTKAPHLQLIEGK ddPTM_A459_MK2206_30min_R2 1 EVRSPTKAPHLQLIEGK 17 2 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 EVRS(0.846)PT(0.154)KAPHLQLIEGK 54.281 0.032405 8445400 32338 75853 54345 74221 85874 67528 77632 47953 75931 43811 TRUE FALSE 34813.82214 72086.25032 56156.83518 68156.90688 82502.15528 70097.82536 67438.82515 54220.62175 82535.34113 42381.45066 0.821440078 1.700891527 1.325033341 1.608177772 1.946657181 1.653974186 1.591234469 1.279347944 1.947440209 1 15.37114535 -5.761073298 21.65634976 1.606321212 1.324298595 0.132110884 0.332252766 3.642800197 215211.7133 0.087903105 0.140918058 1.73E-06 5.761073298 -0.282022617 EVS(ph)DDEAEEK ddPTM_A459_MK2206_30min_R2 2 EVSDDEAEEK 10 0 P07900;P07900-2;G3V2J8 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 EVS(1)DDEAEEK;EVS(1)DDEAEEK 155.99 0.00051622 15189100 96649 42434 63800 34485 30091 21204 56953 42521 29321 72311 TRUE FALSE 104048.5218 40326.78926 65927.06016 31667.46519 28909.47614 22010.93308 49475.00269 48078.6407 31871.28758 69951.49799 1.487438078 0.576496436 0.942468168 0.452706033 0.413278871 0.314659925 0.707275814 0.687313954 0.455619801 1 16.09406733 -3.453098636 9.921741317 0.672390759 0.814831494 0 0.338462478 0 0 0.076438117 0 0.000352291 3.453098636 0.142440734 EVS(ph)DSEAGGGPQGER ddPTM_A459_MK2206_30min_R1 1 EVSDSEAGGGPQGER 15 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 EVS(0.928)DS(0.072)EAGGGPQGER 218.34 2.87E-09 7300100 1513.3 1392.7 1067.8 658.01 1083 1099.1 1566.1 1091.8 1785.3 2151.8 TRUE FALSE 1384.585888 1302.034977 995.3207111 708.6900442 1039.861817 1161.330092 1461.628327 1082.254508 1970.888324 2418.381229 0.572525899 0.538391119 0.411564851 0.293043146 0.429982587 0.480209687 0.604382927 0.447511953 0.814961802 1 11.23982597 -8.416316406 2.633446218 1.000053513 0.467024744 0.813460654 0.085339425 0.113223017 1.575853987 0.089744283 0.02448101 3.83E-09 8.416316406 -0.533028769 EVS(ph)DSEAGGGPQGER ddPTM_A459_MK2206_30min_R2 2 EVSDSEAGGGPQGER 15 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 EVS(0.889)DS(0.111)EAGGGPQGER;EVS(0.996)DS(0.004)EAGGGPQGER 133.25 0.00055393 25966600 21428.8 13153.2 15633 20887 13558.9 14600.3 19009 15054.7 12378.1 19024.2 TRUE FALSE 23069.4054 12500.03121 16154.19642 19180.46529 13026.50946 15155.92465 16513.09547 17022.40098 13454.72476 18403.44191 1.253537546 0.679222467 0.877781259 1.042221633 0.707830064 0.823537506 0.897282994 0.924957465 0.731098282 1 14.16768799 -4.745098511 24.91433741 0.853918947 1.253538738 0.521140884 0.11496205 742.3162331 1131719.329 0.027716196 0.730230795 1.80E-05 4.745098511 0.399619792 EVS(ph)FQSTGESEWK ddPTM_A459_MK2206_30min_R1 2 EVSFQSTGESEWK 13 0 Q07021;I3L3Q7;I3L3B0 Q07021 C1QBP "Complement component 1 Q subcomponent-binding protein, mitochondrial" 1 EVS(0.769)FQS(0.134)T(0.093)GES(0.004)EWK;EVS(0.984)FQS(0.01)T(0.002)GES(0.003)EWK 141 0.00085166 8246800 1831.47 1881.97 1517.4 1541.93 1815.83 1906.77 1777.07 1668.33 1443.54 1619.91 TRUE FALSE 1675.693859 1759.453411 1414.403116 1660.689716 1743.501646 2014.72967 1658.524903 1653.743967 1593.601149 1820.59668 0.920409159 0.966415807 0.776889869 0.912167826 0.957653974 1.106631519 0.910978758 0.908352731 0.875318057 1 10.83019564 -4.434227889 15.16011049 0.932433107 0.655231637 0.002031869 0.080998735 3518657.463 9639422.445 0.021280142 32050812.02 3.68E-05 4.434227889 -0.27720147 EVS(ph)PAPAVAGQSK ddPTM_A459_MK2206_30min_R1 6 EVSPAPAVAGQSK 13 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 EVS(1)PAPAVAGQSK;EVS(1)PAPAVAGQSK;EVS(1)PAPAVAGQSK;EVS(1)PAPAVAGQSK;EVS(1)PAPAVAGQSK;EVS(1)PAPAVAGQSK 180.95 0.0001118 478891100 26865.1 25675.3 26386.2 22310.7 25308 22240.6 25496.8 24495.3 21759.4 20031.4 TRUE FALSE 24580.08217 24003.8333 24595.17826 24029.07398 24299.92877 23499.84355 23795.95499 24281.14017 24021.3675 22513.04106 1.091815277 1.066219052 1.092485826 1.06734021 1.079371228 1.043832483 1.056985368 1.078536663 1.066997898 1 14.45847333 -14.52287875 0.198963303 0.682844622 1.082367497 0.731650159 0.013316807 75.79147692 0.74699939 9.56431196 0.033300406 3.00E-15 14.52287875 0.399522875 EVS(ph)PAPAVAGQSK ddPTM_A459_MK2206_30min_R2 6 EVSPAPAVAGQSK 13 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 EVS(1)PAPAVAGQSK;EVS(1)PAPAVAGQSK;EVS(1)PAPAVAGQSK;EVS(1)PAPAVAGQSK;EVS(1)PAPAVAGQSK;EVS(1)PAPAVAGQSK 191.63 0.00013811 704966200 1907473 2057112 1966038 2103918 2202627 1950341 2373707 1822241 1852433 1972954 TRUE FALSE 2053510.599 1954958.809 2031584.726 1932021.169 2116140.797 2024562.593 2062036.42 2060414.155 2013554.274 1908576.673 1.075938226 1.024301951 1.06445015 1.012283759 1.108753359 1.060770899 1.080405335 1.079555349 1.055003083 1 20.86406571 -4.427925657 21.97182032 1.057736193 3.297380881 0.029207945 0.031893124 2842.000429 527998.0853 0.007284842 62961.04724 3.73E-05 4.427925657 2.239644688 EVS(ph)PEVVR ddPTM_A459_MK2206_30min_R1 4 EVSPEVVR 8 0 Q5T200;A0A087WX14;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 EVS(1)PEVVR;EVS(1)PEVVR;EVS(1)PEVVR;EVS(1)PEVVR 109.44 0.01245 259204000 22322.7 22592.9 23178 19138.8 23446.8 20081.9 22541.4 20047.8 18222 16882.7 TRUE FALSE 20424.03714 21122.0981 21604.74194 20612.87369 22512.86431 21218.91982 21037.70434 19872.5242 20116.24211 18974.25633 1.07640778 1.113197679 1.138634451 1.086360031 1.186495213 1.118300473 1.108749875 1.0473414 1.060186062 1 14.21175572 -8.038846914 1.24020345 1.012206517 1.122319753 0.611052989 0.030709359 0.302425139 0.846169534 0.028089478 0.009560848 9.14E-09 8.038846914 0.110113236 EVS(ph)PEVVR ddPTM_A459_MK2206_30min_R2 4 EVSPEVVR 8 0 Q5T200;A0A087WX14;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 EVS(1)PEVVR;EVS(1)PEVVR;EVS(1)PEVVR;EVS(1)PEVVR 111.61 0.011527 407049000 582837 606563 584074 682894 692823 685630 627593 476707 558980 573868 TRUE FALSE 627459.4488 576441.9634 603546.7356 627099.3757 665619.2879 711722.1301 545189.2852 539014.2417 607599.07 555142.7342 1.130266885 1.038367123 1.087191993 1.129618271 1.199005674 1.2820525 0.982070469 0.970947125 1.094491619 1 19.08249923 -7.311818224 24.99993331 1.009456166 1.138804346 0.473696394 0.068268869 375.9146594 186542.0391 0.031374315 0.021152577 4.88E-08 7.311818224 0.129348179 EVS(ph)PGAGTEVQDALER ddPTM_A459_MK2206_30min_R1 1 EVSPGAGTEVQDALER 16 0 Q6SZW1 Q6SZW1 SARM1 Sterile alpha and TIR motif-containing protein 1 1 EVS(1)PGAGTEVQDALER 128.45 0.00095284 5791500 1732 1446.6 1579 1509.3 1565.9 1454.6 1801.5 1255.3 1239.6 1514.9 TRUE FALSE 1584.684305 1352.426077 1471.821879 1625.546548 1503.526887 1536.958195 1681.325222 1244.325044 1368.460856 1702.577249 0.930756185 0.794340508 0.864467019 0.954756413 0.883088793 0.9027245 0.987517731 0.730847922 0.803758453 1 10.73350454 -10.60282416 5.124001661 1.000002456 0.872779866 0.209038667 0.074417477 2.16E-06 3.88E-07 0.074547719 0.018080129 2.50E-11 10.60282416 -0.127222589 EVS(ph)PGAGTEVQDALER ddPTM_A459_MK2206_30min_R2 1 EVSPGAGTEVQDALER 16 0 Q6SZW1 Q6SZW1 SARM1 Sterile alpha and TIR motif-containing protein 1 1 EVS(1)PGAGTEVQDALER 167.35 1.49E-05 2426600 8341.3 10679 11976 12455 7507.1 6571.4 9914.7 7394.9 10019 11855 TRUE FALSE 8979.916341 10148.69639 12375.27386 11437.38666 7212.333534 6821.479232 8612.88798 8361.43882 10890.43451 11468.17232 0.783029422 0.884944532 1.079097307 0.997315556 0.628899997 0.594818341 0.751025337 0.72909951 0.949622503 1 13.48534787 -6.248417105 24.93272628 0.75176701 0.942657312 0.233350542 0.1383565 993.3962089 1901977.263 0.042164201 0.05408755 5.64E-07 6.248417105 0.190890302 EVS(ph)PLLPK ddPTM_A459_MK2206_30min_R1 4 EVSPLLPK 8 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 EVS(1)PLLPK;EVS(1)PLLPK;EVS(1)PLLPK;EVS(1)PLLPK 107.21 0.013401 39949600 23823.2 27612.5 28006 20166.3 24007.4 22715.1 27908.8 25507.3 28503.6 27625.8 TRUE FALSE 21796.91174 25814.92123 26105.03075 21719.51192 23051.13442 24001.20933 26047.05487 25284.29237 31466.65122 31048.29267 0.702032539 0.831444148 0.840787963 0.699539654 0.742428406 0.773028314 0.838920682 0.814353711 1.013474446 1 14.92222632 -8.16799001 2.016568538 1.018226465 0.773956693 0.764839398 0.050190591 0.162252709 1.176499456 0.046961664 0.014233376 6.79E-09 8.16799001 -0.244269772 EVS(ph)PLLPK ddPTM_A459_MK2206_30min_R2 4 EVSPLLPK 8 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 EVS(1)PLLPK;EVS(1)PLLPK;EVS(1)PLLPK;EVS(1)PLLPK 132.01 0.0034229 50567500 613303 706370 678810 688210 572719 567853 731780 551978 530176 629872 TRUE FALSE 660257.9492 671292.693 701441.1866 631981.0415 550231.1744 589463.0438 635696.407 624123.4198 576289.7501 609319.3282 1.083599221 1.101709173 1.151188144 1.03719185 0.903025965 0.967412351 1.043289417 1.024296114 0.945792663 1 19.21683898 -5.975384525 6.408249932 0.982976764 1.109366991 0.682192273 0.040185297 0.104655359 14.9212083 0.012229982 0.017919691 1.06E-06 5.975384525 0.126390227 EVS(ph)PLLPKLPEEPEAESK ddPTM_A459_MK2206_30min_R1 1 EVSPLLPKLPEEPEAESK 18 1 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 EVS(1)PLLPKLPEEPEAESK 66.137 0.017607 3630400 1122.9 1260.4 1364.1 1576.6 1641 936.27 759.36 1902.6 687.96 422.69 TRUE FALSE 1027.391458 1178.347731 1271.508693 1698.030005 1575.635495 989.2807983 708.7044799 1885.965769 759.4759039 475.0560283 2.162674289 2.480439486 2.676544695 3.574378397 3.316736134 2.082450783 1.491833463 3.969985973 1.598708065 1 8.891953865 -8.511606812 23.54120335 0.999999775 2.701756575 0.408101656 0.702549266 258.3042482 539462.1797 0.690365418 0.178251584 3.08E-09 8.511606812 1.7017568 EVS(ph)PPGAR ddPTM_A459_MK2206_30min_R1 2 EVSPPGAR 8 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 EVS(1)PPGAR;EVS(1)PPGAR 109.44 0.01245 99313000 2064.47 2136.06 1956.35 1845.69 2090.98 2055.9 2337.1 1908.08 1921.21 1938.48 TRUE FALSE 1888.875986 1997.002106 1823.558413 1987.845364 2007.691839 2172.303281 2181.196323 1891.397858 2120.926655 2178.633537 0.867000325 0.916630572 0.837019343 0.912427597 0.921537195 0.997094392 1.001176327 0.868157873 0.97351235 1 11.08920783 -6.305137605 2.349263674 0.960991604 0.879011276 0.472568989 0.041944027 0.297271059 3.22424261 0.014320564 0.017722232 4.95E-07 6.305137605 -0.081980328 EVS(ph)PPGAR ddPTM_A459_MK2206_30min_R2 1 EVSPPGAR 8 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 EVS(1)PPGAR 81.525 0.043521 19411000 13898 25603 24026 20431 23436 26884 25089 23864 25318 23013 TRUE FALSE 14962.04157 24331.59225 24827.01485 18761.72194 22515.78488 27907.08946 21794.78416 26983.10674 27520.11388 22262.08769 0.672086184 1.092960938 1.115215032 0.842765611 1.01139593 1.253570188 0.979008998 1.212065423 1.236187471 1 14.44230127 -6.557031766 9.822475838 1.139023355 0.951961788 0.307156843 0.144781826 0.511587463 141.3802188 0.04711964 0.04722778 2.77E-07 6.557031766 -0.187061566 EVS(ph)PSDVR ddPTM_A459_MK2206_30min_R1 2 EVSPSDVR 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 EVS(0.5)PS(0.5)DVR;EVS(0.981)PS(0.019)DVR 117.53 0.0088168 24265000 14345.3 15986.2 15232.5 9553.8 13703.3 14303.6 15227.5 11965.2 16261.5 15341.8 TRUE FALSE 13125.1569 14945.49547 14198.56034 10289.63533 13157.46854 15113.45747 14211.70126 11860.58952 17951.94112 17242.45801 0.761211476 0.866784508 0.82346498 0.596761513 0.763085433 0.876525694 0.824227106 0.687871156 1.041147446 1 14.07367783 -8.271771967 24.97206772 1.020573778 0.778354827 0.600513676 0.080083434 562.0257638 1358303.146 0.077814042 0.020997492 5.35E-09 8.271771967 -0.24221895 EVS(ph)PSDVR ddPTM_A459_MK2206_30min_R2 2 EVSPSDVR 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 EVS(0.914)PS(0.086)DVR;EVS(0.994)PS(0.006)DVR 117.71 0.0087284 140052000 148788 150837 134665 148365 118340 130611 164850 120744 101825 135212 TRUE FALSE 160179.3237 143346.6539 139154.6639 136243.1049 113693.377 135581.4931 143204.997 136525.6554 110681.5544 130800.0435 1.224612159 1.095922066 1.063873223 1.041613605 0.869215131 1.036555413 1.094839062 1.043773776 0.846188973 1 16.9970035 -4.531035885 0.908623601 0.992567978 1.442047388 0.495100901 0.073997304 2.948334863 1.409305343 0.026527857 1.462524664 2.94E-05 4.531035885 0.44947941 EVS(ph)S(ph)RPSTPGLSVVSGISATSEDIPNKIEDLR ddPTM_A459_MK2206_30min_R1 1 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR 32 2 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 2 EVS(0.548)S(0.548)RPS(0.391)T(0.391)PGLS(0.11)VVS(0.009)GIS(0.001)AT(0.001)S(0.001)EDIPNKIEDLR 52.721 0.013393 18449000 970.85 997.12 1037.9 863.39 805.46 1079 962.38 1011.5 881.45 752.43 TRUE FALSE 888.2741094 932.2073068 967.4502398 929.8884474 773.3768226 1140.092048 898.1813862 1002.656562 973.0798818 845.646709 1.050408049 1.102360237 1.144035954 1.099618124 0.914538914 1.34818954 1.06212367 1.185668378 1.150693158 1 9.723911255 -6.745522492 24.99995943 1.155488608 1.071049982 0.151577249 0.101492116 482.6048837 758004.7739 0.032245974 0.032145706 1.80E-07 6.745522492 -0.084438626 EVS(ph)SRPSTPGLS(ph)VVSGISATSEDIPNKIEDLR ddPTM_A459_MK2206_30min_R2 1 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR 32 2 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 2 EVS(0.438)S(0.438)RPS(0.311)T(0.311)PGLS(0.469)VVS(0.031)GIS(0.001)ATSEDIPNKIEDLR 73.13 0.00013192 3232300 5436.8 5970.5 5306.2 6544 5307.6 4949.2 6731.9 5990.6 5592.7 6589.5 TRUE FALSE 5853.045588 5674.013652 5483.10606 6009.334267 5099.196955 5137.545274 5847.993444 6773.591989 6079.142937 6374.485155 0.918198952 0.890113243 0.860164535 0.942716803 0.799938635 0.805954544 0.917406395 1.06261005 0.953668067 1 12.63809311 -7.5678399 6.310958745 1.004616627 0.869429109 0.614679417 0.048102271 0.131462216 12.77729128 0.023417339 0.013472252 2.70E-08 7.5678399 -0.135187518 EVS(ph)SRPSTPGLSVVSGISATSEDIPNK ddPTM_A459_MK2206_30min_R2 1 EVSSRPSTPGLSVVSGISATSEDIPNK 27 1 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 EVS(0.529)S(0.196)RPS(0.087)T(0.037)PGLS(0.085)VVS(0.063)GIS(0.003)ATSEDIPNK 58.838 0.0034583 2270600 10970 6466.1 12421 9383.5 7186.3 6733.8 11644 7918.7 6577.3 10314 TRUE FALSE 11809.87163 6145.002877 12835.10994 8616.838034 6904.129754 6990.059478 10115.12881 8953.701279 7149.381665 9977.455025 1.183655712 0.615888807 1.286411205 0.863630857 0.691973027 0.700585416 1.013798487 0.897393299 0.716553635 1 13.28445616 -5.976160037 24.99975426 0.828558646 1.001983176 0.160356554 0.194677971 451.1876179 473134.1314 0.053140173 0.078815266 1.06E-06 5.976160037 0.17342453 EVS(ph)TYIK ddPTM_A459_MK2206_30min_R1 1 EVSTYIK 7 0 P68104;A0A087WVQ9;Q5VTE0;A0A087WV01 P68104 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 EVS(0.5)T(0.5)YIK 111.06 0.015151 22918000 5513.9 6485.6 5221 4772.8 5430.3 5470.5 6385.7 4438.4 5687.3 6125.5 TRUE FALSE 5044.91385 6063.386261 4866.613067 5140.401883 5213.999652 5780.234982 5959.721604 4399.595537 6278.515187 6884.373185 0.732806563 0.880746307 0.706907214 0.746676821 0.757367376 0.839616742 0.865688341 0.639069879 0.911995184 1 12.74910959 -8.514001455 21.03500548 1.00000001 0.776709483 0.539785334 0.070511547 43.90828548 104040.4919 0.065928646 0.017022703 3.06E-09 8.514001455 -0.223290527 EVS(ph)TYIKK ddPTM_A459_MK2206_30min_R1 1 EVSTYIKK 8 1 P68104;A0A087WVQ9;Q5VTE0;A0A087WV01 P68104 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 EVS(0.982)T(0.018)YIKK 98.048 0.035511 9575500 2932.3 3452.9 3023.1 2396.2 3401.1 2746.5 2130.8 2732.7 2685 1932 TRUE FALSE 2682.892487 3228.115582 2817.900395 2580.755739 3265.626985 2902.004457 1988.65822 2708.808292 2964.115358 2171.350746 1.235586877 1.48668546 1.2977638 1.188548531 1.503961067 1.336497322 0.915862269 1.247522215 1.365102052 1 11.08437707 -7.049184905 24.99466156 1.148952851 1.347554854 0.323894545 0.147334241 494.2441153 251162.2433 0.056192181 0.043527075 8.93E-08 7.049184905 0.198602003 EVSFQS(ph)TGESEWK ddPTM_A459_MK2206_30min_R1 1 EVSFQSTGESEWK 13 0 Q07021;I3L3Q7;I3L3B0 Q07021 C1QBP "Complement component 1 Q subcomponent-binding protein, mitochondrial" 1 EVS(0.051)FQS(0.716)T(0.053)GES(0.181)EWK 234.9 9.26E-14 15778000 3060.5 3268.3 2491.1 2374.8 2040.9 2240.9 2728.2 2223.4 2779 2970.9 TRUE FALSE 2800.188404 3055.533076 2322.011073 2557.707507 1959.606631 2367.777821 2546.206756 2203.961048 3067.886995 3338.957521 0.838641518 0.915115888 0.695429953 0.766019781 0.586891753 0.709136851 0.762575367 0.660074599 0.918815821 1 11.70518202 -8.440548439 4.606656205 0.998278463 0.741856479 0.512885737 0.086451913 0.169343523 5.996486072 0.089180047 0.02327748 3.63E-09 8.440548439 -0.256421984 EVSFQS(ph)TGESEWK ddPTM_A459_MK2206_30min_R2 3 EVSFQSTGESEWK 13 0 Q07021;I3L3Q7;I3L3B0 Q07021 C1QBP "Complement component 1 Q subcomponent-binding protein, mitochondrial" 1 EVSFQS(0.945)T(0.031)GES(0.024)EWK;EVS(0.021)FQS(0.718)T(0.026)GES(0.235)EWK;EVSFQS(0.747)T(0.019)GES(0.234)EWK 174.24 0.0001287 12687100 42532 50690 41745.3 49356 44947 41395 49705 32096.1 41761 48066 TRUE FALSE 45788.28262 48172.80831 43137.06747 45323.45692 43182.15494 42970.31573 43178.67379 36291.17047 45393.29629 46497.61036 0.984744856 1.036027614 0.927726546 0.974748091 0.928696219 0.924140303 0.928621352 0.780495389 0.97625009 1 15.50486895 -5.790736273 0.855586182 0.907600312 1.013251759 0.188732546 0.059110077 1.080729771 1.45282475 0.02564189 0.081787207 1.62E-06 5.790736273 0.105651447 EVSFQSTGESEWK ddPTM_A459_MK2206_30min_R1 1 EVSFQSTGESEWK 13 0 Q07021;I3L3Q7;I3L3B0 Q07021 C1QBP "Complement component 1 Q subcomponent-binding protein, mitochondrial" 0 135.94 0.01764 0 975.74 854.03 668.93 835.93 857.73 838.22 997.12 1041.4 716.38 749.43 FALSE TRUE 892.7481892 798.4324918 623.5248953 900.3134734 823.5647978 885.679292 930.6039441 1032.29515 790.8502646 842.2750463 1.059924775 0.947947461 0.740286559 1.068906739 0.977786059 1.051532152 1.104869423 1.225603387 0.938945381 1 9.718147614 -6.448699408 1.526178319 1.082079724 0.931094185 0.189953902 0.108724367 0.559084914 2.635115449 0.043068423 0.050463201 3.56E-07 6.448699408 -0.150985539 EVSSLEGS(ph)PPPCLGQEEAVCTK ddPTM_A459_MK2206_30min_R1 4 EVSSLEGSPPPCLGQEEAVCTK 22 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 EVS(0.003)S(0.002)LEGS(0.996)PPPCLGQEEAVCTK;EVS(0.18)S(0.148)LEGS(0.672)PPPCLGQEEAVCTK;EVS(0.004)S(0.013)LEGS(0.983)PPPCLGQEEAVCTK;EVS(0.001)S(0.004)LEGS(0.996)PPPCLGQEEAVCTK 246.92 1.76E-44 120952800 16466.24 16388.13 16342.08 14395.37 16714.5 14669.04 16349.89 14591.19 13863.91 13313.21 TRUE FALSE 15065.69982 15321.25976 15232.82514 15504.10389 16048.72607 15499.58837 15259.21867 14463.62076 15305.11306 14962.55096 1.006893801 1.023973773 1.018063376 1.03619389 1.072592909 1.035892102 1.019827348 0.966654737 1.022894632 1 13.86906854 -7.533926457 24.6739734 0.995513004 1.032807208 0.379440267 0.02042912 199.4569913 445460.4059 0.009994477 0.005776574 2.92E-08 7.533926457 0.037294204 EVSSLEGS(ph)PPPCLGQEEAVCTK ddPTM_A459_MK2206_30min_R2 4 EVSSLEGSPPPCLGQEEAVCTK 22 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 EVS(0.001)S(0.008)LEGS(0.991)PPPCLGQEEAVCTK;EVSS(0.001)LEGS(0.999)PPPCLGQEEAVCTK;EVS(0.002)S(0.008)LEGS(0.991)PPPCLGQEEAVCTK;EVS(0.004)S(0.019)LEGS(0.977)PPPCLGQEEAVCTK 227.43 1.60E-30 41596800 284651 320398 291928 321572 320692 284613 338459 254084 285790 317663 TRUE FALSE 306444.0994 304487.5012 301660.7338 295298.5389 308100.0207 295444.1472 294018.9267 287293.6512 310647.4976 307297.6823 0.997222293 0.990855183 0.981656391 0.960952705 1.002610948 0.961426539 0.956788624 0.93490341 1.01090088 1 18.22927736 -5.054497715 0.99960369 0.971569623 1.005616114 0.077476694 0.022653563 2.861830247 3.101044408 0.007709632 0.095112917 8.82E-06 5.054497715 0.034046491 EVSSRPS(ph)TPGLSVVSGISATSEDIPNKIEDLR ddPTM_A459_MK2206_30min_R1 1 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR 32 2 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 EVS(0.096)S(0.096)RPS(0.329)T(0.329)PGLS(0.135)VVS(0.003)GIS(0.012)AT(0.002)SEDIPNKIEDLR 68.461 6.85E-05 15700000 1508 1446.2 1577.2 1513.6 1346.4 1237.8 1709.5 1373 1219.7 1310.8 TRUE FALSE 1379.736681 1352.052117 1470.144058 1630.177734 1292.770037 1307.883166 1595.462374 1360.996006 1346.49218 1473.1918 0.93656283 0.917770597 0.997931198 1.106561776 0.877530025 0.88778879 1.08299705 0.923841692 0.913996521 1 10.52472956 EVSSRPS(ph)TPGLSVVSGISATSEDIPNKIEDLR ddPTM_A459_MK2206_30min_R2 1 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR 32 2 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 EVS(0.131)S(0.131)RPS(0.365)T(0.365)PGLS(0.008)VVSGISATSEDIPNKIEDLR 68.386 6.93E-05 4940900 8896 10015 11039 10879 11504 9921.7 13248 10229 10167 13155 TRUE FALSE 9577.0846 9517.669663 11407.03475 9990.1509 11052.29516 10299.27725 11508.52169 11565.96542 11051.30728 12725.75343 0.752575056 0.747906182 0.896374019 0.78503414 0.868498295 0.809325539 0.904348945 0.90886292 0.868420667 1 13.63546345 -1.522878745 0.064689044 1.191748022 0.104828907 0.699291865 0.041534897 161.9085404 0.781362778 2.484020592 16.29088408 0.03 1.522878745 -1.086919116 EVSSRPST(ph)PGLSVVSGISATSEDIPNKIEDLR ddPTM_A459_MK2206_30min_R1 1 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR 32 2 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 EVS(0.039)S(0.039)RPS(0.211)T(0.559)PGLS(0.077)VVS(0.025)GIS(0.031)AT(0.016)S(0.004)EDIPNKIEDLR 45.615 0.027752 17346000 1063.4 1102.3 1463.1 1406.4 1408.3 1275.1 1471.8 1320 1338.3 1089.1 TRUE FALSE 972.9522459 1030.54007 1363.788848 1514.721172 1352.204429 1347.29506 1373.618907 1308.459379 1477.421074 1224.02593 0.794878786 0.841926665 1.114182972 1.237491081 1.104718777 1.10070794 1.122213896 1.068980115 1.207017791 1 10.25741841 -5.243421421 4.56940106 1.126082625 0.809329487 0.786131498 0.062918291 0.0769711 4.297129239 0.015844017 0.041621599 5.71E-06 5.243421421 -0.316753138 EVTWEVLEGEVEK ddPTM_A459_MK2206_30min_R2 1 EVTWEVLEGEVEK 13 0 P05455 P05455 SSB Lupus La protein 0 149.38 0.004926 0 5726.6 6074.5 4212.1 5681 4583.6 4101.5 5825.2 3546.3 5116.9 4999.1 FALSE TRUE 6165.032899 5772.849163 4352.529312 5216.844127 4403.624833 4257.585457 5060.344243 4009.813586 5561.958713 4835.979776 1.27482603 1.193728971 0.900030503 1.078756399 0.910596205 0.880397697 1.046394831 0.829162604 1.150120342 1 12.2395925 -5.134728029 4.361708006 0.969358581 1.25741139 0.554031446 0.094077684 0.146229839 4.410075761 0.022587156 0.067459637 7.33E-06 5.134728029 0.288052809 EVVCTTQNT(ph)PTVK ddPTM_A459_MK2206_30min_R2 1 EVVCTTQNTPTVK 13 0 H0YNU5;A0A3B3IT82;P54132;H0YLV8 H0YNU5 BLM Bloom syndrome protein 1 EVVCTTQNT(0.992)PT(0.008)VK 176.4 9.04E-10 0 13286 11896 13140 13980 12667 13936 13936 8646.4 10039 11982 TRUE FALSE 14303.18638 11305.26194 13578.08104 12837.78928 12169.62993 14466.34425 12106.18646 9776.514168 10912.17407 11591.02832 1.2339877 0.975345899 1.171430236 1.107562584 1.049918057 1.24806392 1.044444559 0.843455291 0.941432785 1 13.50072094 -7.555806432 6.659633389 0.922297001 1.123189477 0.538296821 0.08387031 0.135247557 18.35854222 0.037474682 0.021714972 2.78E-08 7.555806432 0.200892476 EVVEEAENGR ddPTM_A459_MK2206_30min_R1 3 EVVEEAENGR 10 0 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 0 ;; 242.39 3.10E-08 102630000 9543.9 10057.3 9631 7927.2 9082.1 9610.1 9922.2 9118.6 8585.9 8890.7 FALSE TRUE 8732.141188 9402.567942 8977.274554 8537.754318 8720.340725 10154.21556 9260.308142 9038.877042 9478.43503 9992.147037 0.87390039 0.940995755 0.898432991 0.854446425 0.872719416 1.016219589 0.926758594 0.904598082 0.948588426 1 13.28657899 -6.725142258 24.99999961 0.951240813 0.889742203 0.470340077 0.037243341 187.4717723 129122.5725 0.01275683 0.012756479 1.88E-07 6.725142258 -0.06149861 EVVEEAENGR ddPTM_A459_MK2206_30min_R2 2 EVVEEAENGR 10 0 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 0 ; 155.42 0.0072813 160241000 181607 217388 163223 220773 212558 337520 210242 181284 201657 195668 FALSE TRUE 195510.9716 206592.828 168664.7734 202735.1397 204211.9049 350364.5601 182636.9729 204978.4412 219196.7613 189283.3692 1.032900948 1.091447331 0.89107022 1.071066838 1.078868713 1.851005514 0.964886528 1.082918389 1.158034973 1 17.53018813 -6.540687839 24.99998969 1.230456291 1.024494066 0.125281957 0.236697144 495.6702719 695805.7762 0.079526997 0.079540917 2.88E-07 6.540687839 -0.205962226 EVVETPLLHPER ddPTM_A459_MK2206_30min_R2 1 EVVETPLLHPER 12 0 P35998;P35998-2 P35998 PSMC2 26S protease regulatory subunit 7 0 102.97 0.01563 2147400 37488 33088 30518 34583 31700 26660 37174 25163 26808 32808 FALSE TRUE 40358.1101 31444.89803 31535.45489 31757.45827 30455.29872 27674.56498 32293.00915 28451.8905 29139.71138 31737.47765 1.271623112 0.990781258 0.993634568 1.000629559 0.959600478 0.871983757 1.017503959 0.89647611 0.918148307 1 14.95389985 -2.12654645 1.165230443 0.948712205 199.9999031 0.799007916 0.046809277 398.8525619 1.176877825 0.013831657 211440.5182 0.007472287 2.12654645 199.0511909 EVVKPVPITS(ph)PAVSK ddPTM_A459_MK2206_30min_R1 2 EVVKPVPITSPAVSK 15 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 EVVKPVPIT(0.078)S(0.876)PAVS(0.046)K;EVVKPVPIT(0.241)S(0.605)PAVS(0.154)K 135.26 0.00022573 366410000 24072 20601.9 20071.8 17728.5 20059.7 17647.2 20489.8 20263.6 18183 17345.5 TRUE FALSE 22024.54999 19260.71257 18709.38214 19093.95214 19260.67967 18646.36921 19122.96283 20086.43748 20073.18792 19494.39149 1.129789047 0.988013018 0.959731528 0.979458741 0.98801133 0.956499167 0.980946896 1.030370068 1.029690407 1 14.2507715 -10.88107791 14.56143968 1 1.000310628 0 0.048176518 0 0 0.047250487 0.011459926 1.31E-11 10.88107791 0.000310628 EVVKPVPITS(ph)PAVSK ddPTM_A459_MK2206_30min_R2 2 EVVKPVPITSPAVSK 15 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 EVVKPVPIT(0.052)S(0.933)PAVS(0.015)K;EVVKPVPIT(0.066)S(0.758)PAVS(0.177)K 137.99 0.00021966 351460000 293330 295870 266420 313150 255920 224620 294290 222055 215560 267390 TRUE FALSE 315787.5703 281177.526 275302.3098 287564.6433 245871.2949 233168.0715 255649.3695 251078.3509 234309.0192 258665.0862 1.220835695 1.08703316 1.064319557 1.111725774 0.950539164 0.901428465 0.98834123 0.970669659 0.905839372 1 17.98072581 -5.240536303 0.632920199 0.945296185 1.268879063 0.744752832 0.048183953 1.124776359 0.502888413 0.02615362 0.243464692 5.75E-06 5.240536303 0.323582878 EVVQGSGAPAALS(ph)PK ddPTM_A459_MK2206_30min_R1 1 EVVQGSGAPAALSPK 15 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 EVVQGSGAPAALS(1)PK 130.27 0.00097296 0 1648.2 1318.5 1215.8 1392.4 1149.5 985.15 1121.9 1068.3 1300.1 977.42 TRUE FALSE 1508.011935 1232.66541 1133.274883 1499.642889 1103.712981 1040.928342 1047.060098 1058.959966 1435.250047 1098.510169 1.372779222 1.122124715 1.031647149 1.36516068 1.004736244 0.94758189 0.953163774 0.963996507 1.306542341 1 10.10133251 -1.522878745 0.585310382 1.042618211 17.83255607 0.28850331 0.139738009 219.0619438 1.786038261 0.066821622 4682.380797 0.03 1.522878745 16.78993786 EVVQGSGAPAALS(ph)PK ddPTM_A459_MK2206_30min_R2 2 EVVQGSGAPAALSPK 15 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 EVVQGSGAPAALS(1)PK;EVVQGS(0.001)GAPAALS(0.999)PK 149.47 0.00028457 11677400 85602 76603 74650 70062 73492 56398 95909 64509 48397 90212 TRUE FALSE 92155.75494 72799.00641 77138.79374 64337.71048 70606.33481 58544.26541 83316.03309 72940.54779 52606.48358 87268.38983 1.056003842 0.834196741 0.883925943 0.737239573 0.80907113 0.670853049 0.954710328 0.83581865 0.602812584 1 16.41317156 EVVYWS(ph)PK ddPTM_A459_MK2206_30min_R2 1 EVVYWSPK 8 0 E6ZCI6;C0MHM2;Q86VZ5 E6ZCI6 SGMS1 Phosphatidylcholine:ceramide cholinephosphotransferase 1 1 EVVYWS(1)PK 96.143 0.02145 0 18286 15583 15837 12372 12624 13652 19058 10013 15578 16086 TRUE FALSE 19685.99022 14809.17088 16364.99768 11361.16802 12128.31833 14171.53643 16555.66171 11321.73348 16932.94628 15561.11514 1.265075802 0.951677997 1.0516597 0.730099863 0.779399048 0.910701855 1.063912294 0.72756569 1.088157637 1 13.92565783 -4.154537294 1.322643054 0.89977515 2.382895597 0.385930262 0.129284076 6.038494755 2.872695102 0.036707403 18.13596745 7.01E-05 4.154537294 1.483120447 EVYELLDS(ph)PGK ddPTM_A459_MK2206_30min_R1 4 EVYELLDSPGK 11 0 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK 271.32 7.20E-31 55835700 20138.5 21803.6 21825 15260.8 13019.8 12683 17855 14576.2 22413.1 26244.1 TRUE FALSE 18425.61482 20384.18168 20343.57981 16436.18946 12501.1938 13401.1005 16663.92553 14448.76182 24743.02195 29495.41724 0.624694158 0.69109657 0.689720021 0.557245532 0.423835123 0.454345175 0.564966598 0.489864636 0.838876824 1 14.8482032 -8.447032429 3.693150729 0.996985364 0.562981693 0.743697576 0.086251557 0.117567518 3.049371447 0.095884598 0.02529348 3.57E-09 8.447032429 -0.434003672 EVYELLDS(ph)PGK ddPTM_A459_MK2206_30min_R2 6 EVYELLDSPGK 11 0 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK 154.28 0.00054572 6577300 96178 77043.7 74079.7 77756.8 70944.3 60108.5 92759 59887.9 53232.5 89646.5 TRUE FALSE 103541.4616 73217.82189 76549.48022 71403.82071 68158.67032 62395.97109 80579.63188 67715.45416 57862.56663 86721.34205 1.193955942 0.844288386 0.882706361 0.823370799 0.785950364 0.719499602 0.929178792 0.780839555 0.667224068 1 16.40409946 EVYELLDS(ph)PGKVLLQSK ddPTM_A459_MK2206_30min_R1 2 EVYELLDSPGKVLLQSK 17 1 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 EVYELLDS(1)PGKVLLQSK;EVYELLDS(1)PGKVLLQSK 98.269 0.0028913 57343000 14198.6 14170.1 15099.3 13758.2 10964.9 9238.1 10378.8 13343.2 10047.3 5946.2 TRUE FALSE 12990.93451 13247.62391 14074.40159 14817.85895 10528.14481 9761.153239 9686.449189 13226.54181 11091.75279 6682.860148 1.943918356 1.982328467 2.106044609 2.217292988 1.575395053 1.460625095 1.44944664 1.979173814 1.659731394 1 12.70624997 -6.274516891 23.65451509 1.563118004 2.059794724 0.549044718 0.238639543 316.4006669 572301.9875 0.073900245 0.084380996 5.31E-07 6.274516891 0.49667672 EVYELLDS(ph)PGKVLLQSK ddPTM_A459_MK2206_30min_R2 1 EVYELLDSPGKVLLQSK 17 1 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 EVY(0.002)ELLDS(0.998)PGKVLLQSK 69.805 0.018389 21551000 54761 90488 78198 78619 101820 70784 86742 50088 80241 74971 TRUE FALSE 58953.54426 85994.4975 80805.08229 72195.57621 97822.0352 73477.73472 75352.6712 56634.67358 87220.21714 72524.70241 0.812875369 1.185726996 1.114173235 0.995461875 1.348809881 1.013140796 1.03899318 0.78090184 1.202627715 1 16.14618485 -6.974416771 24.99993618 0.992900049 1.101422709 0.061511387 0.159393032 548.0713714 535573.9736 0.05424242 0.047835877 1.06E-07 6.974416771 0.108522661 EVYFAER ddPTM_A459_MK2206_30min_R1 2 EVYFAER 7 0 P50238 P50238 CRIP1 Cysteine-rich protein 1 0 ; 137.18 0.039832 92353000 10606.3 10793.5 9976 9100.2 11043.2 9444.9 10350.9 9382.3 9147.8 7867.6 FALSE TRUE 9704.178489 10090.84119 9298.856915 9801.098981 10603.32596 9979.662076 9660.410347 9300.27154 10098.74655 8842.297685 1.097472494 1.141201252 1.051633551 1.108433501 1.199159578 1.128627697 1.092522633 1.051793535 1.142095291 1 13.11020559 -10.66706794 0.442786739 0.951600499 1.11656639 0.388413054 0.042042632 22.3816797 2.669538691 1.373817861 0.024812907 2.15E-11 10.66706794 0.16496589 EVYMT(ph)PLR ddPTM_A459_MK2206_30min_R2 1 EVYMTPLR 8 0 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 EVYMT(1)PLR 97.565 0.047161 6743700 25508 18286 20562 20953 18868 19236 17274 13225 12899 19288 TRUE FALSE 27460.91209 17377.94383 21247.52682 19241.07287 18127.14752 19968.03946 15005.90305 14953.55291 14020.9317 18658.63414 1.471753607 0.931362055 1.138750385 1.031215508 0.971515245 1.070176912 0.804233736 0.801428057 0.751444698 1 14.18755576 -1.522878745 0.389492866 0.857863999 8.302662703 0.590746979 0.126769793 52.14330091 0.702725474 0.09549458 295.3546043 0.03 1.522878745 7.444798705 EVYQQQQYGS(ph)GGR ddPTM_A459_MK2206_30min_R1 3 EVYQQQQYGSGGR 13 0 Q99729-3;Q99729-4;D6R9P3;D6RD18;D6RBZ0;Q99729-2;Q99729 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 EVYQQQQYGS(1)GGR;EVYQQQQYGS(1)GGR;EVYQQQQYGS(1)GGR 247.11 1.01E-22 20380400 5839.3 5345.45 5070.98 3900.43 5207.4 4681.97 5561.63 5111.21 4172.21 3892.73 TRUE FALSE 5342.636872 4997.460233 4726.776006 4200.841794 4999.978231 4947.059095 5190.62381 5066.52323 4605.92616 4374.990781 1.221176715 1.142279032 1.080408221 0.960194433 1.142854575 1.130758747 1.1864308 1.158064893 1.052785341 1 12.09506426 -8.489868039 4.441356634 1.000366444 1.123296084 0.28556527 0.066389263 0.252779558 12.50034892 0.069317502 0.018101557 3.24E-09 8.489868039 0.12292964 EVYQQQQYGS(ph)GGR ddPTM_A459_MK2206_30min_R2 3 EVYQQQQYGSGGR 13 0 Q99729-3;Q99729-4;D6R9P3;D6RD18;D6RBZ0;Q99729-2;Q99729 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 EVYQQQQYGS(1)GGR;EVYQQQQYGS(1)GGR;EVYQQQQYGS(1)GGR 179.55 0.00010981 21066000 36005 41756 39309 44937 39141 39543.5 42872 32740.1 36479.2 36944.1 TRUE FALSE 38761.57048 39682.45776 40619.54244 41265.50335 37604.12767 41048.3556 37242.8549 37019.34348 39652.09488 35738.61704 1.08458507 1.11035236 1.136572867 1.154647459 1.052198736 1.148571461 1.042089985 1.035835926 1.109502778 1 15.12519619 -7.276886412 24.59175781 1.049843492 1.114297968 0.432554972 0.037886143 670.639246 1067656.982 0.015379141 0.010416724 5.29E-08 7.276886412 0.064454475 EVYQQQQYGSGGR ddPTM_A459_MK2206_30min_R1 1 EVYQQQQYGSGGR 13 0 Q99729-3;Q99729-4;D6R9P3;D6RD18;D6RBZ0;Q99729-2;Q99729 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 0 160.86 0.0050395 10951000 1528.1 1531.2 1656.9 1431.2 1480.2 1367.5 1318.4 1580.3 1270.3 1134.6 FALSE TRUE 1398.127071 1431.518602 1544.434244 1541.431272 1421.2405 1444.926668 1230.451942 1566.483604 1402.352231 1275.162814 1.096430241 1.122616333 1.211166314 1.208811342 1.114556106 1.133131121 0.964937127 1.228457721 1.099743669 1 10.31646575 -6.674173019 2.653817564 1.09028076 1.159889548 0.177775631 0.074520755 0.55292641 7.921872993 0.027510464 0.026850959 2.12E-07 6.674173019 0.069608788 EWFLQAAK ddPTM_A459_MK2206_30min_R2 1 EWFLQAAK 8 0 P06744-2;P06744;A0A2U3TZU2;K7EQ48;A0A0J9YXP8;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;K7ERC6 P06744-2 GPI Glucose-6-phosphate isomerase 0 148.38 0.021819 3135000 21997 27902 26885 22923 22909 23587 26715 21643 23348 26564 FALSE TRUE 23681.10723 26516.42725 27781.33248 21050.11757 22009.47755 24484.61981 23207.28841 24471.81441 25378.76684 25697.21886 0.921543587 1.031879263 1.081102692 0.819159369 0.856492591 0.952812051 0.903105061 0.952313733 0.98760753 1 14.64932461 -5.748532057 24.99985871 0.919966422 1.01354556 0.277700193 0.063988799 296.5273993 574331.2691 0.017932313 0.030808611 1.78E-06 5.748532057 0.093579138 EWNGVVSESDS(ph)PVK ddPTM_A459_MK2206_30min_R1 1 EWNGVVSESDSPVK 14 0 P18858-3;P18858;M0R0Q7;P18858-2;B4E135;F5GZ28;M0QY71;M0R1G7 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 EWNGVVSESDS(1)PVK 268.42 3.17E-44 46134000 2711.6 3410.5 3079.3 2062.1 1859.2 1931.3 2534.6 2195.4 3214.3 3285.5 TRUE FALSE 2480.964181 3188.47583 2870.285695 2220.923299 1785.144127 2040.648537 2365.521459 2176.205849 3548.437987 3692.532544 0.671886883 0.863492953 0.777321706 0.601463433 0.483447094 0.552641991 0.640623049 0.589353194 0.960976767 1 11.85039492 -8.27120081 21.54208557 0.980489148 0.648656041 0.625197113 0.103117424 86.14937191 190104.8123 0.108342588 0.029810783 5.36E-09 8.27120081 -0.331833107 EWNGVVSESDS(ph)PVK ddPTM_A459_MK2206_30min_R2 4 EWNGVVSESDSPVK 14 0 P18858-3;P18858;M0R0Q7;P18858-2;B4E135;F5GZ28;M0QY71;M0R1G7 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 EWNGVVS(0.001)ES(0.013)DS(0.986)PVK;EWNGVVS(0.002)ES(0.035)DS(0.963)PVK;EWNGVVS(0.001)ES(0.01)DS(0.989)PVK;EWNGVVSESDS(1)PVK 197.51 0.00010426 37605400 189729 143900 152410 154917 133007 102250.5 185336 135432 113385 191244 TRUE FALSE 204254.7981 136754.1353 157491.2733 142259.7855 127784.4769 106141.7144 161001.1606 153133.4274 123247.0223 185003.7239 1.104057766 0.739196662 0.851287044 0.768956335 0.690712998 0.573727448 0.870259026 0.827731595 0.666186711 1 17.49719479 -4.758554212 24.97654537 0.767088983 1.104058226 0.424576466 0.113948746 74.13603081 641667.5221 0.027707014 0.187888913 1.74E-05 4.758554212 0.336969243 EWNGVVSESDS(ph)PVKRPGR ddPTM_A459_MK2206_30min_R1 1 EWNGVVSESDSPVKRPGR 18 2 P18858-3;P18858;M0R0Q7;P18858-2;B4E135;F5GZ28;M0QY71;M0R1G7 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 EWNGVVS(0.001)ES(0.041)DS(0.958)PVKRPGR 62.438 0.016391 20281000 2716.1 3149.3 3352.2 2811 2643.3 2739 2805.4 2666.6 2535.2 2537.6 TRUE FALSE 2485.081432 2944.279998 3124.662004 3027.503707 2538.011764 2894.079813 2618.256885 2643.286197 2798.743112 2851.977046 0.871353939 1.032364549 1.095612606 1.061545608 0.88991311 1.01476266 0.918049775 0.926825902 0.981334375 1 11.47774665 -6.249280349 24.93189124 0.952614788 1.02218623 0.165428052 0.065206146 1229.408797 2520882.951 0.019611575 0.025129126 5.63E-07 6.249280349 0.069571442 EWNGVVSESDS(ph)PVKRPGR ddPTM_A459_MK2206_30min_R2 4 EWNGVVSESDSPVKRPGR 18 2 P18858-3;P18858;M0R0Q7;P18858-2;B4E135;F5GZ28;M0QY71;M0R1G7 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 EWNGVVS(0.001)ES(0.007)DS(0.992)PVKRPGR;EWNGVVSES(0.072)DS(0.928)PVKRPGR;EWNGVVS(0.001)ES(0.01)DS(0.989)PVKRPGR;EWNGVVSES(0.008)DS(0.991)PVKRPGR 88.555 0.0072995 299827000 342657 400675 401259 406815 419122 364744 440420 353040 328093 428276 TRUE FALSE 368891.0834 380778.0621 414636.7748 373576.9132 402665.1644 378624.5885 382592.325 399183.5402 356629.9361 414301.3892 0.890393064 0.919084686 1.000809521 0.90170326 0.971913623 0.913886843 0.923463775 0.963510021 0.860798311 1 18.66032113 -4.999467679 19.91188615 0.940087566 0.897565269 0.126613854 0.041967338 2.988879769 110910.3182 0.00969272 0.035368459 1.00E-05 4.999467679 -0.042522297 EWPVSSFNRPFPNS(ph)P ddPTM_A459_MK2206_30min_R1 2 EWPVSSFNRPFPNSP 15 1 Q96H12 Q96H12 MSANTD3 Myb/SANT-like DNA-binding domain-containing protein 3 1 EWPVS(0.001)SFNRPFPNS(0.999)P;EWPVSSFNRPFPNS(1)P 158.65 0.00068509 27951000 3799.5 3354.7 4240.1 4050.4 3985.4 3345.2 3879 4501.7 3300.1 3222.1 TRUE FALSE 3476.332573 3136.30842 3952.293826 4362.36251 3826.653079 3534.602333 3620.238988 4462.342112 3643.157205 3621.278074 0.959973938 0.866077765 1.091408543 1.204647205 1.056713404 0.976064876 0.999713061 1.232256132 1.006041826 1 11.82228325 -5.268544371 24.89465348 1.077497498 0.913025848 0.352378303 0.08520669 496.1170822 1738313.14 0.022792286 0.049099058 5.39E-06 5.268544371 -0.16447165 EWPVSSFNRPFPNS(ph)P ddPTM_A459_MK2206_30min_R2 1 EWPVSSFNRPFPNSP 15 1 Q96H12 Q96H12 MSANTD3 Myb/SANT-like DNA-binding domain-containing protein 3 1 EWPVSSFNRPFPNS(1)P 130.95 0.0035746 3160500 7168.5 11398 11695 12457 10941 14688 11355 9778.6 11472 11476 TRUE FALSE 7717.325872 10831.99189 12084.90546 11439.22325 10511.40137 15246.96213 9864.07486 11056.69659 12469.81382 11101.53906 0.695158197 0.975719838 1.088579286 1.030417782 0.946841813 1.373409763 0.888532194 0.995960698 1.123250907 1 13.43847208 -4.769788011 2.840494479 1.055998236 0.623896728 0.431679082 0.124055374 0.416199104 4.547618679 0.03120956 0.4292829 1.70E-05 4.769788011 -0.432101508 EWQELDDAEK ddPTM_A459_MK2206_30min_R1 1 EWQELDDAEK 10 0 Q13200;Q13200-3;Q13200-2 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 135.99 0.026386 2447700 1310.2 1482.8 1204 960.88 1437.1 1043.9 1101.6 1322.8 1375.5 1051.5 FALSE TRUE 1198.76061 1386.26945 1122.275835 1034.887144 1379.857264 1103.004716 1028.114274 1311.234899 1518.488147 1181.767758 1.01437918 1.173047277 0.949658532 0.8757111 1.167621349 0.933351505 0.869979966 1.109553793 1.284929409 1 10.20673083 -7.98677229 24.66900894 1.160723693 1.001077483 0.212958888 0.117847603 254.9040635 475383.007 0.064252318 0.030837988 1.03E-08 7.98677229 -0.15964621 EWSLESS(ph)PAQNWTPPQPR ddPTM_A459_MK2206_30min_R1 1 EWSLESSPAQNWTPPQPR 18 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;E5RHT6;E5RHC5;F8W1U7;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 EWSLES(0.021)S(0.725)PAQNWT(0.253)PPQPR 124.68 0.00086058 9725600 254.64 237.52 460.12 224.82 432.95 355.88 316.66 166.35 226.18 130.96 TRUE FALSE 232.9815308 222.0574048 428.8883364 242.1356754 415.7046847 376.0296181 295.5361892 164.8956195 249.6922204 147.1843135 1.582923651 1.508702929 2.913954118 1.64511876 2.824381721 2.554821293 2.007932654 1.120334196 1.696459456 1 7.201480111 -7.6640755 5.179473834 1.310194563 2.187525007 0.395339669 0.497835572 0.222261896 9.465087594 0.248669128 0.138774787 2.17E-08 7.6640755 0.877330444 EWSLESSPAQNWT(ph)PPQPR ddPTM_A459_MK2206_30min_R1 3 EWSLESSPAQNWTPPQPR 18 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;E5RHT6;E5RHC5;F8W1U7;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 EWSLESSPAQNWT(1)PPQPR;EWSLES(0.003)S(0.001)PAQNWT(0.996)PPQPR;EWS(0.001)LES(0.033)S(0.238)PAQNWT(0.728)PPQPR 292.19 2.59E-151 10238400 3135.73 3118.08 3109.38 2575.2 3391.69 3340.91 3562.36 3096.37 2719.42 2925.64 TRUE FALSE 2869.019697 2915.092425 2898.323949 2773.54235 3256.591805 3530.069437 3324.721464 3069.298764 3002.113441 3288.090371 0.872548919 0.88656092 0.881461159 0.843511594 0.990420408 1.073592584 1.011140537 0.933459369 0.913026438 1 11.68303424 -6.270165323 24.53941523 0.989155533 0.872876418 0.64464725 0.042134576 353.7205891 994744.4366 0.014639713 0.016861319 5.37E-07 6.270165323 -0.116279114 EWSLESSPAQNWT(ph)PPQPR ddPTM_A459_MK2206_30min_R2 2 EWSLESSPAQNWTPPQPR 18 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;E5RHT6;E5RHC5;F8W1U7;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 EWSLESS(0.001)PAQNWT(0.999)PPQPR;EWSLESS(0.001)PAQNWT(0.999)PPQPR 171.87 1.38E-07 19423100 30122 33244 29981 33972 27775 32352 29093 26882 29517 34615 TRUE FALSE 32428.16348 31593.1513 30980.55158 31196.37893 26684.41394 33583.17803 25273.05415 30395.5697 32084.33531 33485.51538 0.968423604 0.943487085 0.925192616 0.93163801 0.796894228 1.002916564 0.754745861 0.907722917 0.958155636 1 15.03124955 -5.506376451 1.669324387 0.896045448 0.95979283 0.053681035 0.075598231 1.048139003 5.560289174 0.02212235 0.067155935 3.12E-06 5.506376451 0.063747383 EWSQHINGASHSR ddPTM_A459_MK2206_30min_R2 2 EWSQHINGASHSR 13 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991;H0Y8T4 D6REM6 MATR3 Matrin-3 0 ; 93.649 0.0094946 5612000 6758.6 21677.3 13842 30799 29374 41090 28576 20115 29021 17318.9 FALSE TRUE 7276.043612 20600.8368 14303.48537 28282.62318 28220.62917 42653.70874 24823.93687 22744.09957 31545.19412 16753.78571 0.434292508 1.229622794 0.853746468 1.688133277 1.684432979 2.545914665 1.481691201 1.357549867 1.882869619 1 14.03219951 -5.764212026 16.75677305 1.707981648 0.878249522 0.44835121 0.415941734 1.049414511 6346.129049 0.115261072 0.181308328 1.72E-06 5.764212026 -0.829732126 EWTDGLFTHVLR ddPTM_A459_MK2206_30min_R1 1 EWTDGLFTHVLR 12 0 Q14204;A0A2R8YFZ7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 89.629 0.035851 3235700 3349.5 3210.2 3515.1 2803.4 3419.2 3096.6 3505.8 3294.7 2906 2841.6 FALSE TRUE 3064.607436 3001.215397 3276.504806 3019.318354 3283.006024 3271.926816 3271.934479 3265.894785 3208.089099 3193.638861 0.959597365 0.939747895 1.025947187 0.945416337 1.027982864 1.024513716 1.024516115 1.022624951 1.004524694 1 11.64098547 -5.505479311 0.814000172 1.01840617 0.941277691 0.439119672 0.025252626 0.968450837 0.960988645 0.010573159 0.056306766 3.12E-06 5.505479311 -0.077128479 EWYQETHEK ddPTM_A459_MK2206_30min_R1 1 EWYQETHEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 147.74 0.002257 13604000 6332.5 6039.2 5779.1 5633.2 6360.9 6193.8 5762 5391.4 5216.5 4962.3 FALSE TRUE 5793.887622 5646.046982 5386.830793 6067.07004 6107.531884 6544.487603 5377.627493 5344.263558 5758.773842 5577.067187 1.038877142 1.012368471 0.965889528 1.08786031 1.09511535 1.173464006 0.964239324 0.95825698 1.032581041 1 12.44529094 EWYQETHEK ddPTM_A459_MK2206_30min_R2 2 EWYQETHEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 ; 92.538 0.036193 17364200 102997 133597 111717 143944 137499 125123 147665 107852 111181 130747 FALSE TRUE 110882.5295 126962.7672 115441.589 132183.3147 132100.0984 129884.6434 128276.4081 121948.6267 120851.3224 126480.7361 0.876675239 1.003811103 0.912720724 1.045086539 1.044428602 1.026912457 1.014197198 0.964167592 0.955491928 1 16.94855814 -3.711790728 1.079725083 1.002311656 1.27E-18 0.430237185 0.040359687 15.02674543 2.411980693 0.013078138 29.36854496 0.000194182 3.711790728 -1.002311656 EY(ph)QMELKY(ph)LKQY(ph)KEK ddPTM_A459_MK2206_30min_R1 1 EYQMELKYLKQYKEK 15 3 A0A494C0Y7;E7ESD9;A0A494BZX5;A0A494C122;E7EN38;A0A494C1B7;A0A1W2PQ90;Q92878-3;Q92878;Q92878-2 A0A494C0Y7 RAD50 DNA repair protein RAD50 3 EY(1)QMELKY(1)LKQY(1)KEK 42.958 0.038189 7022100 2498.1 3164.5 3222.6 2128 1967.9 1349.5 2121.6 2600.5 2681.3 2293.4 TRUE FALSE 2285.623477 2958.490475 3003.858891 2291.898929 1889.514376 1425.907524 1980.071935 2577.764103 2960.03073 2577.523706 0.88675168 1.1478034 1.165404952 0.889186363 0.73307352 0.553208306 0.76820707 1.000093266 1.148400972 1 11.33176998 -5.884611347 6.078086047 0.843676482 1.0732516 0.209267419 0.17123763 0.312835551 15.43255094 0.053353274 0.080045039 1.30E-06 5.884611347 0.229575118 EYAENIGDGRS(ph)PEFR ddPTM_A459_MK2206_30min_R1 2 EYAENIGDGRSPEFR 15 1 A0A087WUB9;Q8WYA6-3;Q8WYA6-2;Q8WYA6-4;Q8WYA6 A0A087WUB9 CTNNBL1 Beta-catenin-like protein 1 1 EYAENIGDGRS(1)PEFR;EYAENIGDGRS(1)PEFR 164.63 0.00044147 6392600 3974.9 4011.4 3794.2 3402.1 3463.5 3820.4 3661.7 2915.1 3617.7 3359.2 TRUE FALSE 3636.813882 3750.257131 3536.660275 3664.130331 3325.541461 4036.707746 3417.434674 2889.613588 3993.772861 3775.363057 0.963301761 0.993350063 0.936773556 0.970537211 0.88085342 1.069223724 0.905193652 0.765386943 1.057851338 1 11.88239967 EYAENIGDGRS(ph)PEFR ddPTM_A459_MK2206_30min_R2 2 EYAENIGDGRSPEFR 15 1 A0A087WUB9;Q8WYA6-3;Q8WYA6-2;Q8WYA6-4;Q8WYA6 A0A087WUB9 CTNNBL1 Beta-catenin-like protein 1 1 EYAENIGDGRS(1)PEFR;EYAENIGDGRS(1)PEFR 172.43 0.00018575 24194100 37311.9 44498 39878 51845 47311 46587 47477 38765 40206 42689 TRUE FALSE 40168.52775 42288.29403 41207.51262 47609.09766 45453.33242 48359.90093 41243.21287 43831.7186 43703.0452 41296.06143 0.972696339 1.024027294 0.997855757 1.152872599 1.100669915 1.171053589 0.998720252 1.061401913 1.058286037 1 15.33371657 -5.718585722 24.9841561 1.081702471 1.000776353 0.309076264 0.054099897 173.0340908 100879.4279 0.01493967 0.025876049 1.91E-06 5.718585722 -0.080926118 EYCLS(ph)PR ddPTM_A459_MK2206_30min_R1 1 EYCLSPR 7 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 EYCLS(1)PR 93.143 0.026096 42717000 3959.1 3543.1 3384.5 3134.6 3737.6 3149.2 3850.8 3130.4 3010.5 2917.3 TRUE FALSE 3622.357755 3312.443546 3154.76957 3376.027435 3588.723478 3327.504983 3593.920158 3103.031243 3323.452248 3278.717148 1.10480947 1.010286461 0.962196319 1.029679378 1.094551105 1.014880159 1.096136079 0.946416267 1.013644086 1 11.67891573 -7.772592231 24.99881631 0.98502265 1.040354248 0.252187332 0.045291253 341.4137125 765258.1513 0.024906291 0.012144004 1.69E-08 7.772592231 0.055331598 EYCLS(ph)PR ddPTM_A459_MK2206_30min_R2 3 EYCLSPR 7 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 EYCLS(1)PR;EYCLS(1)PR;EYCLS(1)PR 96.948 0.022817 93935000 195531 208012 182383 215921 224948 238458 243557 177960 201374 195863 TRUE FALSE 210501.0037 197682.4266 188463.5582 198279.5636 216115.4112 247532.6863 211577.6733 201219.983 218889.1465 189472.0064 1.110987358 1.043333157 0.994677588 1.046484742 1.140619216 1.30643408 1.116669831 1.062003759 1.155258504 1 17.53162519 -4.428499684 20.76233717 1.1005192 2.066580921 0.000354992 0.087319039 9666.296087 1462247.981 0.022905559 137935.6733 3.73E-05 4.428499684 0.966061721 EYDQLY(ph)EEYTR ddPTM_A459_MK2206_30min_R1 1 EYDQLYEEYTR 11 0 A0A5F9ZHY3;E9PFP1;O00459 A0A5F9ZHY3 PIK3R2 Phosphatidylinositol 3-kinase regulatory subunit beta 1 EYDQLY(1)EEYTR 138.22 0.017741 1971300 784.07 828.33 752.58 585.7 790.03 656.09 474.81 717.67 661.47 865.57 TRUE FALSE 717.3807292 774.4055664 701.4969664 630.8107155 758.5614322 693.2372488 443.1362912 711.3954869 730.2321736 972.8033463 0.737436535 0.796055615 0.72110871 0.648446285 0.779768527 0.712618076 0.455525048 0.731283964 0.750647267 1 9.926004381 -8.773168808 2.364700625 0.999785677 0.696256757 0.502076896 0.089946958 1.072770632 8.825023434 0.09136671 0.024790414 1.69E-09 8.773168808 -0.303528921 EYDS(ph)GDTDEIIAMK ddPTM_A459_MK2206_30min_R2 1 EYDSGDTDEIIAMK 14 0 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 1 EY(0.014)DS(0.959)GDT(0.027)DEIIAMK 86.497 0.041124 0 6673.1 7457.9 5396.4 8622.4 6335.2 5871.9 8264.6 6950 7606.6 6809.6 TRUE FALSE 7183.997667 7087.551531 5576.313283 7917.922338 6086.448216 6095.359269 7179.448092 7858.388863 8268.208318 6587.40331 1.090565938 1.075924943 0.846511595 1.201979288 0.92395257 0.925305311 1.08987529 1.192941815 1.255154411 1 12.68549417 -7.526972377 5.434246304 1.164831261 1.010368084 0.235821604 0.111889249 0.220493921 21.76941417 0.050796781 0.030448773 2.97E-08 7.526972377 -0.154463177 EYEIHHGK ddPTM_A459_MK2206_30min_R2 1 EYEIHHGK 8 0 Q8IXB1-2;Q8IXB1 Q8IXB1-2 DNAJC10 DnaJ homolog subfamily C member 10 0 79.451 0.027372 919230 6562.5 6313.2 6477.4 6647.2 5040.1 5014.4 6615.4 8802.2 6656.7 6717.9 FALSE TRUE 7064.930046 5999.695668 6693.353283 6104.102497 4842.20035 5205.226506 5746.790033 9952.677762 7235.687733 6498.695473 1.087130498 0.923215389 1.029953367 0.939281202 0.74510344 0.800964829 0.884299019 1.531488559 1.113406185 1 12.66593443 -7.723725757 24.99944007 1.241835989 0.910321392 0.430765683 0.156648922 132.2270466 87650.03001 0.073055742 0.042177528 1.89E-08 7.723725757 -0.331514597 EYESCHEGR ddPTM_A459_MK2206_30min_R2 1 EYESCHEGR 9 0 B1AMX7;B1AMX8;Q12933-4;Q12933-3;Q12933 B1AMX7 TRAF2 TNF receptor-associated factor 2 0 100.48 0.025123 2110300 7107.2 24500 14953 27921 24666 31098 31401 18245 25631 15704 FALSE TRUE 7651.332697 23283.36563 15451.52556 25639.76499 23697.4889 32281.45618 27278.01098 20629.68414 27860.33805 15191.57977 0.503656158 1.532649401 1.017111176 1.687761601 1.559909454 2.124957159 1.795600681 1.357968326 1.833932907 1 13.89098428 -4.643406173 0.9529504 1.651061606 1.11E-12 0.425447081 0.346613646 2.476253001 1.499057287 0.113342497 4.499330343 2.27E-05 4.643406173 -1.651061606 EYFDDS(ph)TEER ddPTM_A459_MK2206_30min_R2 2 EYFDDSTEER 10 0 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 EYFDDS(0.58)T(0.42)EER;EYFDDS(0.847)T(0.153)EER 109.16 0.01024 32077000 50876 73122 53017 106642 83235 176697 57499 52088 110070 50225 TRUE FALSE 54771.10568 69490.86781 54784.56032 97929.00747 79966.77568 183421.3282 49949.31223 58896.08044 119643.6896 48586.16236 1.127298453 1.430260478 1.127575376 2.015574038 1.645875529 3.77517629 1.02805634 1.21219865 2.462505451 1 15.56825786 -5.762754505 24.99216852 1.919977784 1.248566258 0.126107639 0.77624484 72.39616855 1375840.297 0.217618771 0.343848205 1.73E-06 5.762754505 -0.671411527 EYGS(ph)PLK ddPTM_A459_MK2206_30min_R1 2 EYGSPLK 7 0 P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;P21127-10;P21127-5;P21127-4;P21127-12;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 EY(0.001)GS(0.999)PLK;EY(0.004)GS(0.996)PLK 82.749 0.040579 367830000 11510.5 13244.1 11877.8 10194.4 9864.8 9836.6 12644.6 9928.5 13415.9 14730 TRUE FALSE 10531.47153 12381.90668 11071.56803 10979.57445 9471.864127 10393.53979 11801.10181 9841.696171 14810.53081 16554.86361 0.636155741 0.747931664 0.668780383 0.663223492 0.572149934 0.627823946 0.712848024 0.594489716 0.894633213 1 14.0149675 -8.414980097 3.881723066 0.996616031 0.655832162 0.851109514 0.05001986 0.077617056 1.95592603 0.049499162 0.013045214 3.85E-09 8.414980097 -0.340783869 EYGS(ph)PLK ddPTM_A459_MK2206_30min_R2 4 EYGSPLK 7 0 P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;P21127-10;P21127-5;P21127-4;P21127-12;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 EY(0.003)GS(0.997)PLK;EYGS(1)PLK;EY(0.001)GS(0.999)PLK;EYGS(1)PLK 83.783 0.038651 706791000 1114410 990487 1067875 1011531 884573 709713 1147950 957920 711557 1115250 TRUE FALSE 1199730.086 941300.8559 1103477.42 928885.6816 849840.2194 736721.6255 997222.7861 1083123.433 773446.9417 1078859.484 1.112035538 0.872496252 1.022818482 0.860988568 0.787720952 0.682870788 0.924330556 1.003952275 0.716911658 1 20.04107554 -1.522880361 0.799133566 0.855309761 60.68618509 0.283897336 0.112573095 671.7706242 2.346533366 0.040950174 72755.63464 0.029999888 1.522880361 59.83087533 EYGS(ph)TSSIDK ddPTM_A459_MK2206_30min_R2 2 EYGSTSSIDK 10 0 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 EYGS(0.985)T(0.013)S(0.002)SIDK;EYGS(0.942)T(0.022)S(0.035)SIDK 190.53 0.0001799 25924000 105190 104933 103143 103420 87595 86441 111061 83910 72917 99211 TRUE FALSE 113243.4273 99722.17981 106581.7361 94970.25518 84155.58017 89730.57283 96478.55729 94877.32511 79259.18886 95973.75319 1.179941635 1.039056789 1.110530042 0.989544037 0.876860364 0.934949086 1.005259814 0.988575751 0.825842339 1 16.55035229 -5.870044131 3.809643643 0.940474809 1.103495649 0.607531864 0.061340057 0.158378606 4.32432312 0.017586476 0.027493835 1.35E-06 5.870044131 0.163020841 EYGS(ph)TSSIDR ddPTM_A459_MK2206_30min_R1 2 EYGSTSSIDR 10 0 Q9P2F8 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 EYGS(0.866)T(0.133)S(0.001)SIDR;EYGS(0.835)T(0.076)S(0.088)S(0.001)IDR 158.08 0.00048138 17516500 4358.1 3729.3 4289.4 3577.4 4541.2 3706.7 4924.4 4062 3294.1 3278.7 TRUE FALSE 3987.42071 3486.521892 3998.247479 3852.931968 4360.314388 3916.570151 4595.902261 4026.486362 3636.533483 3684.890109 1.082100305 0.946167128 1.085038457 1.04560295 1.183295637 1.062872985 1.247229124 1.092701883 0.986877051 1 11.84740588 -5.673981585 2.144143404 1.104477393 1.016809513 0.085177219 0.081620801 0.59076015 5.498738919 0.023932218 0.050163538 2.12E-06 5.673981585 -0.087667879 EYGST(ph)SSIDK ddPTM_A459_MK2206_30min_R2 1 EYGSTSSIDK 10 0 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 EYGS(0.194)T(0.675)S(0.104)S(0.027)IDK 152.69 0.0014592 14679000 35869 32231 35683 37461 39222 30085 41728 32159 28183 33356 TRUE FALSE 38615.15822 30630.45541 36872.65341 34400.31647 37681.94721 31229.90576 36249.06348 36362.29172 30634.3064 32267.59645 1.196716287 0.94926362 1.142714595 1.06609479 1.167795292 0.967841091 1.123389018 1.126898056 0.949382965 1 14.9777985 -8.265635977 24.99612968 0.974691471 1.087974556 0.270910662 0.077067732 488.2608534 2908161.718 0.061062502 0.018001958 5.42E-09 8.265635977 0.113283084 EYGSTS(ph)SIDR ddPTM_A459_MK2206_30min_R1 1 EYGSTSSIDR 10 0 Q9P2F8 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 EYGS(0.204)T(0.041)S(0.749)S(0.006)IDR 88.134 0.032676 5962000 1582.6 1904.2 1872.6 1867.1 1940.3 1913.1 1711.2 1912.5 1075 1109 TRUE FALSE 1447.991559 1780.236234 1745.493129 2010.904366 1863.013742 2021.418069 1597.04897 1895.779214 1186.750097 1246.391293 1.161747172 1.428312477 1.400437519 1.613381269 1.494726218 1.621816584 1.281338356 1.521014488 0.952148899 1 10.28354134 -8.265154621 24.9917805 0.97607437 1.446944493 0.658758602 0.133592197 196.9661677 1324926.999 0.113600666 0.033774096 5.43E-09 8.265154621 0.470870123 EYGSTSS(ph)IDK ddPTM_A459_MK2206_30min_R2 1 EYGSTSSIDK 10 0 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 EYGS(0.042)T(0.068)S(0.043)S(0.847)IDK 131.83 0.0025439 8817500 38194 39652 33622 31659 40972 33198 43600 39739 33699 35075 TRUE FALSE 41118.16201 37682.93934 34742.9407 29072.35843 39363.23341 34461.37315 37875.26763 44933.02374 36630.07811 33930.50562 1.211834638 1.110591742 1.02394409 0.856820666 1.160113376 1.01564573 1.116260042 1.324266259 1.079561811 1 15.05029531 -7.520202275 24.97281125 1.165201032 1.059176091 0.054508298 0.11838397 222.2911197 2074156.44 0.054619601 0.032279867 3.02E-08 7.520202275 -0.106024941 EYIIPS(ph)PGY(ph)RSVRERTSTSGTHR ddPTM_A459_MK2206_30min_R1 1 EYIIPSPGYRSVRERTSTSGTHR 23 3 F8WDH3;E9PET4;C9JZL5;A5PKY6;F8WCY8;O15440-4;O15440-3;O15440-2;O15440-5;O15440 F8WDH3 ABCC5 Multidrug resistance-associated protein 5 2 EY(0.481)IIPS(0.519)PGY(0.925)RS(0.003)VRERT(0.014)S(0.014)T(0.014)S(0.014)GT(0.014)HR 46.362 0.031458 5830600 2677.8 2696.2 2499.3 2302.5 2385.7 1857.9 2469.7 2317.9 2027.6 2044.9 TRUE FALSE 2450.039048 2520.67689 2329.654479 2479.838949 2290.672517 1963.092692 2304.950819 2297.634845 2238.376276 2298.23765 1.066051219 1.096786875 1.013669965 1.079017633 0.996708289 0.854173063 1.002921007 0.99973771 0.973953358 1 11.16631227 -6.411596913 4.969822048 0.964367304 1.061866594 0.510729166 0.045025619 0.194290324 7.23909525 0.014613406 0.016532257 3.88E-07 6.411596913 0.09749929 EYINECDSDYHEER ddPTM_A459_MK2206_30min_R2 1 EYINECDSDYHEER 14 0 Q93008;Q93008-3 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X 0 104.09 0.01709 0 37965 39099 33420 39390 35594 35031 32855 29387 28593 35435 FALSE TRUE 40871.62959 37157.40052 34534.20612 36171.711 34196.40071 36364.12925 28541.09903 33227.9818 31079.96746 34278.75885 1.192331081 1.083977418 1.007452057 1.055222307 0.9975974 1.060835645 0.832617632 0.969346117 0.906682987 1 15.06502725 -1.522878745 0.353931533 0.935789282 3.942637812 0.60997828 0.058383136 41.73513939 0.585671878 0.048793473 84.05946584 0.03 1.522878745 3.006848529 EYIPGQPPLSQS(ph)SDS(ph)SPTR ddPTM_A459_MK2206_30min_R1 1 EYIPGQPPLSQSSDSSPTR 19 0 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 2 EYIPGQPPLS(0.002)QS(0.997)S(0.005)DS(0.589)S(0.383)PT(0.022)R 205.92 4.90E-15 11226000 4988.3 5102.3 4981.8 3855.2 5307 4515.6 4735.2 4617 4705 4149.2 TRUE FALSE 4564.01889 4770.139343 4643.649296 4152.128172 5095.610952 4771.26937 4419.323448 4576.634056 5194.101587 4663.234221 0.978723923 1.022925102 0.995800141 0.890396659 1.092720355 1.023167429 0.947694934 0.981429162 1.113841026 1 12.18711518 -6.274299736 24.998823 1.021442504 0.977304473 0.180853333 0.055766357 1808.285886 3515060.979 0.01786151 0.020388442 5.32E-07 6.274299736 -0.044138031 EYIPGQPPLSQS(ph)SDS(ph)SPTR ddPTM_A459_MK2206_30min_R2 1 EYIPGQPPLSQSSDSSPTR 19 0 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 2 EYIPGQPPLS(0.315)QS(0.656)S(0.04)DS(0.739)S(0.247)PT(0.003)R 171.39 5.35E-08 11413000 104910 116340 104100 124070 108860 124220 121240 91500 103850 107280 TRUE FALSE 112941.9903 110562.7248 107570.642 113933.0841 104585.6094 128947.2791 105321.0424 103459.3642 112882.6853 103779.4624 1.08828845 1.065362281 1.036531117 1.09783845 1.007767886 1.242512499 1.014854384 0.996915592 1.087716998 1 16.66316144 EYIPGQPPLSQS(ph)SDSS(ph)PTR ddPTM_A459_MK2206_30min_R1 1 EYIPGQPPLSQSSDSSPTR 19 0 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 2 EYIPGQPPLS(0.137)QS(0.843)S(0.023)DS(0.293)S(0.649)PT(0.055)R 151.64 0.00037767 13202000 1685.5 1709.2 1630 1209.1 1656.2 1691.5 1686.7 1273.8 1693.9 1429.8 TRUE FALSE 1542.139374 1597.930769 1519.360141 1302.225092 1590.230047 1787.271268 1574.183321 1262.663301 1869.986967 1606.934418 0.959677854 0.994397003 0.945502271 0.810378492 0.989604821 1.11222415 0.979618896 0.785759074 1.163698372 1 10.65009534 -6.491443757 24.94580611 0.999506056 0.92935934 0.120052612 0.102622681 1681.792139 1334618.171 0.032359536 0.036653064 3.23E-07 6.491443757 -0.070146715 EYIPGQPPLSQS(ph)SDSS(ph)PTR ddPTM_A459_MK2206_30min_R2 1 EYIPGQPPLSQSSDSSPTR 19 0 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 2 EYIPGQPPLS(0.066)QS(0.928)S(0.006)DS(0.299)S(0.655)PT(0.047)R 178.1 1.28E-11 10449000 80900 90795 86411 106570 96121 92363 96738 77850 78031 93374 TRUE FALSE 87093.7662 86286.25233 89291.89961 97862.8901 92346.80657 95877.93869 84036.1844 88025.2623 84817.99533 90327.21403 0.96420295 0.955263076 0.988538178 1.08342642 1.022358628 1.061451299 0.930352888 0.974515413 0.939008208 1 16.46287309 -9.752697512 8.166430927 1.000000012 0.993331091 0.001047876 0.048158055 0 0 0.050371953 0.012216993 1.77E-10 9.752697512 -0.006668922 EYIPGQPPLSQSS(ph)DSSPTR ddPTM_A459_MK2206_30min_R1 3 EYIPGQPPLSQSSDSSPTR 19 0 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 EYIPGQPPLSQS(0.106)S(0.578)DS(0.225)S(0.09)PTR;EYIPGQPPLS(0.001)QS(0.009)S(0.485)DS(0.319)S(0.16)PT(0.027)R;EYIPGQPPLSQS(0.021)S(0.62)DS(0.233)S(0.09)PT(0.036)R 234.51 3.28E-24 176527000 12096 11847.3 12064.1 9468 12597.3 11623.7 13617.1 11210.6 11554 11024.9 TRUE FALSE 11067.17168 11076.03862 11245.2225 10197.227 12095.52287 12281.82385 12708.7281 11112.58691 12755.07965 12390.74785 0.893180284 0.893895893 0.907549943 0.822971069 0.976173756 0.991209248 1.025662717 0.896845537 1.029403536 1 13.59697564 -6.362352053 7.500962195 0.98421572 0.882636032 0.63033837 0.040171457 0.186311937 12.22188972 0.012145055 0.013773037 4.34E-07 6.362352053 -0.101579688 EYIPGQPPLSQSS(ph)DSSPTR ddPTM_A459_MK2206_30min_R2 2 EYIPGQPPLSQSSDSSPTR 19 0 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 EYIPGQPPLSQS(0.206)S(0.585)DS(0.206)S(0.002)PTR;EYIPGQPPLS(0.001)QS(0.182)S(0.381)DS(0.051)S(0.381)PT(0.004)R 254.02 4.25E-38 141289800 102985 123499 106279 128995 127411 131660 127459 97996 110079 124924 TRUE FALSE 110869.6108 117366.2192 109822.2888 118455.6959 122408.204 136670.4136 110723.4802 110804.4137 119653.4724 120847.7401 0.917432222 0.971190848 0.908765764 0.980206132 1.012912644 1.130930652 0.91622301 0.916892724 0.990117584 1 16.88283097 -5.914246525 6.390372277 0.993548694 0.936710877 0.186182523 0.057887792 0.425596675 25.76692205 0.017785536 0.026583638 1.22E-06 5.914246525 -0.056837817 EYIPGQPPLSQSSDS(ph)SPTR ddPTM_A459_MK2206_30min_R1 3 EYIPGQPPLSQSSDSSPTR 19 0 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 EYIPGQPPLSQS(0.002)S(0.059)DS(0.68)S(0.255)PT(0.003)R;EYIPGQPPLSQS(0.007)S(0.025)DS(0.683)S(0.274)PT(0.01)R;EYIPGQPPLSQS(0.076)S(0.021)DS(0.619)S(0.278)PT(0.005)R 239.8 8.84E-30 716352300 14302.3 14429.8 14461.8 12734.6 13589.6 13164.9 15289.4 13104.3 13797.8 12147.9 TRUE FALSE 13085.81428 13490.4174 13480.17331 13715.4211 13048.29746 13910.28526 14269.47202 12989.73049 15232.13069 13652.87356 0.958465939 0.988100954 0.98735063 1.004581273 0.955718032 1.018854031 1.045162541 0.951428315 1.115672141 1 13.73691701 -6.886380637 7.394365465 1.02509058 0.981372258 0.253978231 0.040584765 0.349753196 21.33818244 0.013467596 0.011880935 1.30E-07 6.886380637 -0.043718322 EYIPGQPPLSQSSDS(ph)SPTR ddPTM_A459_MK2206_30min_R2 5 EYIPGQPPLSQSSDSSPTR 19 0 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 EYIPGQPPLS(0.003)QS(0.109)S(0.109)DS(0.328)S(0.328)PT(0.124)R;EYIPGQPPLS(0.21)QS(0.054)S(0.054)DS(0.394)S(0.251)PT(0.036)R;EYIPGQPPLSQS(0.023)S(0.181)DS(0.342)S(0.342)PT(0.112)R;EYIPGQPPLSQS(0.002)S(0.176)DS(0.597)S(0.224)PT(0.001)R;EYIPGQPPLSQS(0.001)S(0.042)DS(0.471)S(0.471)PT(0.016)R 239.8 8.84E-30 877384000 650799 757412 723414 823278 789586 856821 817714 620163 703236 801901 TRUE FALSE 700624.6718 719800.0215 747532.2617 756013.5539 758582.8863 889427.9236 710347.1695 701220.4334 764402.1961 775735.036 0.903175233 0.927894175 0.963643805 0.974577038 0.977889165 1.146561496 0.915708504 0.903943229 0.985390837 1 19.56520444 -5.231689673 1.552142361 0.986093397 0.899745873 0.178006825 0.061480375 1.05568978 4.075972597 0.019544144 0.106556742 5.87E-06 5.231689673 -0.086347524 EYIPGQPPLSQSSDSS(ph)PTR ddPTM_A459_MK2206_30min_R1 1 EYIPGQPPLSQSSDSSPTR 19 0 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 EYIPGQPPLSQS(0.008)S(0.109)DS(0.403)S(0.478)PT(0.002)R 216.9 4.71E-19 801200000 9748.5 8948.4 10413 7685 9758.6 9327.9 11068 8738.6 9635.6 8624.9 TRUE FALSE 8919.338884 8365.857534 9706.194572 8276.900032 9369.894298 9856.037637 10329.67391 8662.199342 10637.2551 9693.417727 0.920143868 0.863045189 1.001318095 0.853868085 0.966624421 1.016776323 1.065637962 0.893616636 1.097368895 1 13.24278971 -6.518075857 5.097000851 1.009945254 0.912121815 0.38876406 0.061881619 0.19467595 15.18360895 0.019177736 0.020337793 3.03E-07 6.518075857 -0.097823439 EYIPGQPPLSQSSDSS(ph)PTR ddPTM_A459_MK2206_30min_R2 2 EYIPGQPPLSQSSDSSPTR 19 0 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 EYIPGQPPLSQS(0.033)S(0.107)DS(0.349)S(0.502)PT(0.01)R;EYIPGQPPLSQS(0.001)S(0.016)DS(0.084)S(0.532)PT(0.368)R 184.97 5.57E-14 898350000 188007 239290 212257 248348 229724 239673 228819 178854 207692 221309 TRUE FALSE 202400.9605 227407.2066 219333.5424 228057.174 220703.8815 248793.924 198774.7904 202230.8319 225756.6747 214087.7055 0.945411415 1.062215161 1.024503215 1.065251148 1.030904045 1.162112151 0.928473637 0.944616747 1.054505555 1 17.70784242 -10.65320579 5.276584407 0.999999339 1.025648686 0.011239693 0.066960118 5.28E-07 8.71E-08 0.065753802 0.015947229 2.22E-11 10.65320579 0.025649347 EYPS(ph)PPPSPLR ddPTM_A459_MK2206_30min_R1 1 EYPSPPPSPLR 11 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 EYPS(0.978)PPPS(0.022)PLR 87.216 0.032367 6644700 1977 2025.2 2308.7 2230.9 2405.6 2521.1 2940.8 2653.1 2522.9 2377.9 TRUE FALSE 1808.845768 1893.359112 2151.991876 2402.724305 2309.779858 2663.842503 2744.624598 2629.904226 2785.164483 2672.492204 0.676838557 0.708461978 0.80523785 0.899057554 0.864279362 0.996763433 1.026990684 0.984064321 1.042160003 1 11.38397002 -5.588175933 0.58898981 1.025751012 0.587701267 0.941903128 0.030441719 0.364314361 0.180637014 0.018725143 0.097070797 2.58E-06 5.588175933 -0.438049745 EYPS(ph)PPPSPLR ddPTM_A459_MK2206_30min_R2 1 EYPSPPPSPLR 11 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 EYPS(0.879)PPPS(0.121)PLR 87.641 0.031769 8232700 14394 19433 20490 23537 21378 19391 23869 23132 20654 23148 TRUE FALSE 15496.01571 18467.98548 21173.12637 21613.95181 20538.5923 20128.93809 20734.97163 26155.43182 22450.44759 22392.68266 0.692012473 0.824733051 0.945537732 0.96522387 0.917201062 0.898906951 0.925970861 1.168034765 1.002579634 1 14.45073975 -3.660359891 0.45284825 1.017217435 7.61E-28 0.654782341 0.06877497 9.095090385 0.660257084 0.049529356 6.149985498 0.000218595 3.660359891 -1.017217435 EYQDLLNVK ddPTM_A459_MK2206_30min_R2 1 EYQDLLNVK 9 0 P08670;B0YJC4;P17661;E7ESP9;E7EMV2;P07197;P12036-2;P07196;P07197-2;Q16352;P12036;B0YJC5 P08670;B0YJC5 VIM;DES;NEFM;NEFH;NEFL;INA Vimentin;Desmin;Neurofilament medium polypeptide;Neurofilament heavy polypeptide;Neurofilament light polypeptide;Alpha-internexin 0 132.01 0.048004 9244600 26050 28902 30235 27716 33402 21616 36056 23399 20342 27428 FALSE TRUE 28044.40803 27466.76871 31243.01981 25451.51414 32090.46965 22438.61203 31321.80389 26457.32964 22111.31039 26533.02661 1.05696227 1.035191692 1.177514359 0.959239009 1.209453792 0.845686109 1.180483642 0.997147066 0.833350477 1 14.69550163 -8.00326672 24.98566305 0.916199726 1.0642253 0.229215792 0.110002461 164.5922449 1258881.921 0.056805939 0.026419497 9.93E-09 8.00326672 0.148025574 EYS(ph)PPYAPSHQQYPPSHATPLPK ddPTM_A459_MK2206_30min_R1 4 EYSPPYAPSHQQYPPSHATPLPK 23 0 Q9UPT8 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 EY(0.002)S(0.85)PPY(0.008)APS(0.005)HQQY(0.121)PPS(0.013)HAT(0.001)PLPK;EYS(0.999)PPYAPSHQQYPPSHATPLPK;EY(0.001)S(0.998)PPY(0.001)APS(0.001)HQQYPPSHATPLPK;EY(0.019)S(0.901)PPY(0.019)APS(0.06)HQQY(0.001)PPSHATPLPK 92.38 6.63E-05 129354000 37371.4 22920 31693.7 21172 44401 41346.1 39871.2 35012.8 24991.3 23926.1 TRUE FALSE 34192.76618 21427.90383 29542.41995 22802.67111 42632.41415 43687.08045 37211.465 34706.68678 27589.23507 26890.2459 1.271567628 0.796865299 1.098629594 0.847990427 1.585422993 1.624644141 1.38382762 1.290679412 1.025994153 1 14.71479533 -6.252858952 24.99620425 1.351542809 0.995760981 0.310863847 0.226195089 724.4749721 2110515.113 0.068142972 0.086561382 5.59E-07 6.252858952 -0.355781829 EYS(ph)PPYAPSHQQYPPSHATPLPK ddPTM_A459_MK2206_30min_R2 7 EYSPPYAPSHQQYPPSHATPLPK 23 0 Q9UPT8 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 EY(0.003)S(0.987)PPY(0.003)APS(0.008)HQQYPPSHATPLPK;EY(0.07)S(0.604)PPY(0.238)APS(0.082)HQQY(0.004)PPSHATPLPK;EY(0.044)S(0.885)PPY(0.051)APS(0.019)HQQY(0.001)PPSHATPLPK;EYS(1)PPYAPSHQQYPPSHATPLPK;EY(0.007)S(0.958)PPY(0.021)APS(0.011)HQQY(0.002)PPS(0.001)HATPLPK;EYS(0.998)PPY(0.001)APS(0.001)HQQYPPSHATPLPK;EYS(0.998)PPY(0.001)APS(0.001)HQQYPPSHATPLPK 162.61 4.01E-10 253325200 327901.7 554707 439578 633501 630176 603535 683411 469279 514674 473125.2 TRUE FALSE 353006.1063 527161.057 454233.3111 581741.9418 605432.1239 626502.9473 593678.3148 530615.3766 559439.4142 457687.1635 0.771282514 1.151793406 0.992453683 1.2710471 1.322807743 1.368845354 1.297126863 1.159340744 1.222318341 1 18.8040023 -4.233786818 0.915224058 1.244141526 2.91E-15 0.540658914 0.119290728 3.874775821 1.268686187 0.040289245 6.103748442 5.84E-05 4.233786818 -1.244141526 EYTINIHK ddPTM_A459_MK2206_30min_R2 1 EYTINIHK 8 0 P62899-3;H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899;P62899-2;B8ZZK4 P62899-3 RPL31 60S ribosomal protein L31 0 115.49 0.01379 8166900 132710 142070 119180 153010 132940 124110 156930 143450 109740 147900 FALSE TRUE 142870.3796 135015.0104 123153.4017 140508.5935 127720.1076 128833.093 136324.9025 162199.4075 119284.9868 143074.0351 0.998576573 0.943672346 0.860766956 0.982069132 0.892685438 0.900464525 0.952827691 1.133674656 0.833729102 1 17.12640235 -7.533468536 24.99870298 0.998871344 0.92779961 0.101165541 0.077540479 415.2404121 980220.3079 0.034293457 0.019822673 2.93E-08 7.533468536 -0.071071734 EYVNSTSEES(ph)HDEDEIRPVQQQDLHR ddPTM_A459_MK2206_30min_R2 1 EYVNSTSEESHDEDEIRPVQQQDLHR 26 1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 1 EY(0.003)VNS(0.092)T(0.092)S(0.076)EES(0.736)HDEDEIRPVQQQDLHR 45.099 0.026682 9512400 7049.2 8740.1 7288.2 13271 11134 8682.7 11903 6694.6 9428.2 9550.3 TRUE FALSE 7588.892172 8306.079343 7531.18495 12186.71685 10696.82322 9013.126233 10340.1218 7569.607206 10248.24779 9238.674493 0.821426513 0.899055308 0.815180246 1.319097979 1.157830945 0.975586513 1.119221357 0.819339096 1.109276856 1 13.17347016 -5.6663562 23.52160071 1.065759073 0.850592018 0.408735189 0.124518168 11.03509984 2721.187509 0.034928152 0.060497312 2.16E-06 5.6663562 -0.215167055 EYVSNDAAQS(ph)DDEEK ddPTM_A459_MK2206_30min_R2 2 EYVSNDAAQSDDEEK 15 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 EYVSNDAAQS(1)DDEEK;EYVSNDAAQS(1)DDEEK 240.34 1.25E-20 4330300 55909 34162 41264 33876 31023 24673 42569 34972 23262 51275 TRUE FALSE 60189.43603 32465.56476 42639.72116 31108.22244 29804.88114 25611.9483 36979.63917 39542.96048 25285.28671 49601.90095 1.213450188 0.654522592 0.859638852 0.627157868 0.600881833 0.516350136 0.745528668 0.797206553 0.509764469 1 15.59810779 EYVSNDAAQS(ph)DDEEKLQSQPTDTDGGR ddPTM_A459_MK2206_30min_R1 2 EYVSNDAAQSDDEEKLQSQPTDTDGGR 27 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 EYVS(0.002)NDAAQS(0.996)DDEEKLQS(0.002)QPTDTDGGR;EY(0.001)VS(0.025)NDAAQS(0.947)DDEEKLQS(0.018)QPT(0.008)DT(0.001)DGGR 92.716 7.63E-06 44858700 2340.6 2502.29 2625.68 2138.28 1917.11 1911.21 2125.46 2041.26 2572.01 2365.33 TRUE FALSE 2141.519679 2339.390466 2447.456157 2302.970696 1840.747449 2019.421059 1983.674442 2023.413479 2839.379644 2658.364938 0.805577763 0.88001103 0.920662217 0.866310966 0.692435949 0.759647793 0.74620095 0.761149626 1.068092497 1 11.37632345 -8.262987189 24.99714608 1.034046274 0.805375257 0.651946451 0.067228626 96.7266717 1562059.543 0.06225061 0.019376782 5.46E-09 8.262987189 -0.228671017 EYVSNDAAQS(ph)DDEEKLQSQPTDTDGGR ddPTM_A459_MK2206_30min_R2 3 EYVSNDAAQSDDEEKLQSQPTDTDGGR 27 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 EYVS(0.014)NDAAQS(0.986)DDEEKLQSQPTDTDGGR;EYVSNDAAQS(0.999)DDEEKLQSQPTDTDGGR;EYVSNDAAQS(0.998)DDEEKLQS(0.001)QPTDTDGGR 143 5.95E-13 131684000 242401 243160 235307 256320 214613 161063 249864 198658 162026 260664 TRUE FALSE 260959.4069 231085.028 243152.0179 235377.8361 206186.2153 167192.3653 217056.5567 224623.2827 176118.7286 252158.555 1.034902056 0.916427475 0.964282247 0.933451717 0.817684791 0.663044588 0.860793942 0.890801752 0.698444392 1 17.94397165 -6.20392113 3.823669591 0.809783063 0.963284139 0.353128934 0.093117192 0.252991235 7.546183211 0.027879932 0.03596211 6.25E-07 6.20392113 0.153501076 EYVSNDAAQSDDEEKLQS(ph)QPTDTDGGR ddPTM_A459_MK2206_30min_R1 1 EYVSNDAAQSDDEEKLQSQPTDTDGGR 27 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 EYVS(0.001)NDAAQS(0.404)DDEEKLQS(0.589)QPT(0.005)DTDGGR 110.13 6.38E-10 19529000 851.88 1033 1171.6 764.86 751.32 921.98 750.6 893.69 1121.4 900.02 TRUE FALSE 779.4231326 965.7515122 1092.075056 823.7696497 721.3933335 974.1817108 700.5288435 885.8765626 1237.973543 1011.521272 0.770545468 0.954751559 1.079636273 0.814386877 0.713176631 0.963085738 0.692549789 0.875786389 1.223872969 1 9.982310945 -8.20590398 9.077551887 1.111470254 0.860059157 0.403022436 0.123618725 0.395179594 62.43765907 0.08556104 0.032098823 6.22E-09 8.20590398 -0.251411096 EYVTCHTCR ddPTM_A459_MK2206_30min_R1 2 EYVTCHTCR 9 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 0 ; 160.82 0.0012842 9430700 7301.2 6082.9 7275.8 5926 7332.7 7414.1 7324.3 6755.6 5147.4 5393.1 FALSE TRUE 6680.1946 5686.902104 6781.938968 6382.421547 7040.623032 7833.879935 6835.709311 6696.536501 5682.49065 6061.237944 1.102117201 0.938241026 1.118903272 1.05298977 1.161581693 1.292455437 1.127774454 1.104813334 0.937513211 1 12.56539676 -3.661935191 15.48564331 1.09183131 45.15637815 0 0.10235233 0 0 0.024561896 0 0.000217803 3.661935191 44.06454684 EYVTCHTCR ddPTM_A459_MK2206_30min_R2 3 EYVTCHTCR 9 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 0 ;; 136.99 0.003642 11021900 88436 122310 113037 133962 131316 134207 143612 129609 120598 122671 FALSE TRUE 95206.72816 116236.2633 116805.5972 123016.8761 126159.874 139314.3414 124755.5719 146549.3413 131087.396 118668.2553 0.802293148 0.979505959 0.984303653 1.03664519 1.063130773 1.173981543 1.051296925 1.234949827 1.104654279 1 16.85657453 -3.740654693 0.523380269 1.124795001 0.046460665 0.65895922 0.065443578 6.544601935 0.597051487 0.034443955 5.479017846 0.000181696 3.740654693 -1.078334336 FACNGTVIEHPEYGEVIQLQGDQR ddPTM_A459_MK2206_30min_R2 1 FACNGTVIEHPEYGEVIQLQGDQR 24 0 K7EM18;P41567;O60739;K7EQP2 K7EM18 EIF1;EIF1B Eukaryotic translation initiation factor 1;Eukaryotic translation initiation factor 1b 0 129.07 1.74E-07 4202100 5281.4 9641.3 6094.1 9745.9 7431.2 9706.2 9197.5 6075.4 7943.7 8517.1 FALSE TRUE 5685.748045 9162.527062 6297.274252 8949.628794 7139.413749 10075.57624 7989.857202 6869.47564 8634.628667 8239.187725 0.690085993 1.112066792 0.764307655 1.086227076 0.866519126 1.222884656 0.969738458 0.833756417 1.047995137 1 13.0082864 -4.744774178 24.67427395 0.98293497 0.690084987 0.316471625 0.131614269 1034.838629 1532070.74 0.031139007 0.834373344 1.80E-05 4.744774178 -0.292849982 FADLS(ph)EAANR ddPTM_A459_MK2206_30min_R2 2 FADLSEAANR 10 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 FADLS(1)EAANR;FADLS(1)EAANR 92.247 0.026895 13708300 30192.4 38165 32850.3 43925 30015.3 32713.5 39058 28455.9 29146.1 31007.5 TRUE FALSE 32503.95336 36269.7816 33945.51261 40336.18699 28836.74851 33958.43517 33929.63768 32175.18383 31681.17509 29995.72781 1.083619426 1.209164912 1.131678245 1.344731064 0.961361854 1.132109058 1.131149005 1.072658881 1.056189578 1 14.87246942 -6.27593755 24.99961795 1.069816113 1.189173164 0.397743238 0.079698008 908.1948343 1566023.414 0.024115427 0.027463542 5.30E-07 6.27593755 0.119357051 FADLSEAANR ddPTM_A459_MK2206_30min_R1 4 FADLSEAANR 10 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 ;;; 228.31 0.00011009 61927000 13136.5 11852.3 11580.8 10922.2 12606.3 11305.6 12373.3 10755.9 9205.2 9183.2 FALSE TRUE 12019.17169 11080.71312 10794.72756 11763.42974 12104.16438 11945.7133 11547.89973 10661.8623 10162.11348 10320.88415 1.164548649 1.073620531 1.045911126 1.139769575 1.172783669 1.157431198 1.118886674 1.033037688 0.984616564 1 13.33327895 -7.863105446 3.175267356 0.995426943 1.123989835 0.683102446 0.037730491 0.166310634 3.268732845 0.027171335 0.011625323 1.37E-08 7.863105446 0.128562892 FADLSEAANR ddPTM_A459_MK2206_30min_R2 4 FADLSEAANR 10 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 ;;; 173.39 0.0015978 97468000 276968 348099 310724 373564 335655 315889 348501 275952 310610 315386 FALSE TRUE 298172.883 330812.9098 321083.3831 343042.6262 322475.4982 327910.3772 302742.4001 312019.8739 337626.2963 305094.9806 0.977311663 1.084294829 1.052404672 1.124379777 1.056967563 1.074781291 0.992289022 1.0226975 1.106626847 1 18.21889892 -7.205321548 24.991055 1.032294483 1.064930291 0.101261689 0.044904751 672.4861738 299480.0019 0.016979526 0.013152283 6.23E-08 7.205321548 0.032635808 FADQDDIGNVS(ph)FDR ddPTM_A459_MK2206_30min_R1 2 FADQDDIGNVSFDR 14 0 E9PQP7;Q5H9R7-2;Q5H9R7;Q5H9R7-5;H0YEN2;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-3 E9PQP7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 FADQDDIGNVS(1)FDR;FADQDDIGNVS(1)FDR 205.33 1.33E-05 6078400 1323.16 1106.51 1153.95 860.84 933.58 1263.62 1234.1 883.92 1124.25 1315.44 TRUE FALSE 1210.618294 1034.475998 1075.623089 927.142046 896.3935317 1335.165072 1151.775441 876.1919806 1241.119811 1478.406638 0.818866922 0.699723588 0.727555641 0.627122486 0.606324071 0.903110848 0.779065388 0.592659663 0.839498267 1 10.52982742 -6.75418775 24.99987316 0.794670474 0.694065566 0.22379871 0.112200675 327.7617802 1129951.831 0.037851777 0.037108794 1.76E-07 6.75418775 -0.100604908 FADQHVPGS(ph)PFSVK ddPTM_A459_MK2206_30min_R2 1 FADQHVPGSPFSVK 14 0 P21333-2;P21333;Q60FE5 P21333-2 FLNA Filamin-A 1 FADQHVPGS(0.933)PFS(0.067)VK 111.64 0.0038662 3219900 28219 29201 28205 29518 30741 26043 37890 24053 23683 30086 TRUE FALSE 30379.46834 27750.9208 29145.34062 27106.28498 29533.95388 27034.08461 32914.99749 27196.80969 25742.90453 29104.29628 1.043813877 0.953499117 1.00141025 0.931349953 1.014762686 0.928869207 1.130932601 0.934460309 0.884505307 1 14.82894451 -7.948174301 24.99994368 0.931324281 0.99675703 0.164204916 0.061830209 155.6047652 75060.99709 0.032212023 0.015474151 1.13E-08 7.948174301 0.065432748 FADSDQDRDPHR ddPTM_A459_MK2206_30min_R1 1 FADSDQDRDPHR 12 1 E9PCT3;P51636-3;P51636-2;P51636 E9PCT3 CAV2 Caveolin;Caveolin-2 0 76.843 0.03742 4030200 2622.4 2041.9 1784.2 1655.9 2125.3 2362.6 3709.3 2238.5 3687.5 3926.8 FALSE TRUE 2399.351109 1908.971939 1663.093475 1783.437705 2040.644801 2496.36837 3461.859365 2218.929031 4070.828821 4413.28163 0.543665986 0.432551579 0.376838284 0.404106933 0.462387169 0.565649007 0.784418411 0.502784371 0.922404044 1 12.1076361 -8.009960193 0.581800634 1.00711273 0.422103644 0.765320472 0.102410982 0.364801837 0.280701284 0.101286853 0.053421564 9.77E-09 8.009960193 -0.585009086 FADSDQDRDPHR ddPTM_A459_MK2206_30min_R2 2 FADSDQDRDPHR 12 1 E9PCT3;P51636-3;P51636-2;P51636 E9PCT3 CAV2 Caveolin;Caveolin-2 0 ; 95.483 0.014333 9417600 76932 46478 53488 50009 44818 63181 83769 44717 66506 66652 FALSE TRUE 82821.97307 44169.97011 55271.26322 45923.10473 43058.22013 65585.39723 72770.02968 50561.66544 72290.57166 64477.1507 1.284516642 0.685048418 0.857222483 0.712238432 0.667805876 1.017188206 1.12861733 0.784179587 1.121181238 1 15.97650037 -6.801506381 24.99509023 1.004143706 0.826389021 0.167932135 0.186212465 272.9790821 170291.2987 0.064275762 0.056686597 1.58E-07 6.801506381 -0.177754684 FAELPEFRPEEVLPS(ph)PT(ph)LQSLATSPR ddPTM_A459_MK2206_30min_R1 1 FAELPEFRPEEVLPSPTLQSLATSPR 26 1 I3L2J0;A0A0A0MQR4;Q96RK0;I3L135;I3L1Q4;I3L373 I3L2J0 CIC Protein capicua homolog 2 FAELPEFRPEEVLPS(0.625)PT(0.429)LQS(0.206)LAT(0.423)S(0.316)PR 61.903 0.013706 22039000 1199.3 1566.6 1301.7 959.26 1250.9 1188.1 1005.4 1125.8 889.65 877.15 TRUE FALSE 1097.293237 1464.614055 1213.344231 1033.142371 1201.074004 1255.369195 938.3316005 1115.957249 982.1323011 985.8179641 1.113078963 1.48568408 1.230799473 1.048005219 1.218352726 1.273429011 0.951830495 1.132011477 0.996261315 1 9.945177461 -6.856266898 0.462812761 0.988471351 1.305638366 0.358376669 0.123147939 1.26661469 0.578147489 0.11944739 0.15939068 1.39E-07 6.856266898 0.317167015 FAELPEFRPEEVLPS(ph)PTLQSLAT(ph)SPR ddPTM_A459_MK2206_30min_R1 1 FAELPEFRPEEVLPSPTLQSLATSPR 26 1 I3L2J0;A0A0A0MQR4;Q96RK0;I3L135;I3L1Q4;I3L373 I3L2J0 CIC Protein capicua homolog 2 FAELPEFRPEEVLPS(0.944)PT(0.188)LQS(0.114)LAT(0.453)S(0.301)PR 90.98 0.00012436 21876000 2982.1 2950.5 3043.7 2130.5 2686.6 2218.3 2415.7 2028.3 1990.6 1788.6 TRUE FALSE 2728.456735 2758.421914 2837.102124 2294.591479 2579.587033 2343.898229 2254.553061 2010.566787 2197.529993 2010.185271 1.357316052 1.372222727 1.411363502 1.141482585 1.283258349 1.166011045 1.121564809 1.000189791 1.093197739 1 10.97311276 -6.564107025 0.502893387 1.001158736 1.421332878 0.811738903 0.062545433 0.45468986 0.240469102 0.054071314 0.0866924 2.73E-07 6.564107025 0.420174142 FAELPEFRPEEVLPS(ph)PTLQSLATS(ph)PR ddPTM_A459_MK2206_30min_R2 1 FAELPEFRPEEVLPSPTLQSLATSPR 26 1 I3L2J0;A0A0A0MQR4;Q96RK0;I3L135;I3L1Q4;I3L373 I3L2J0 CIC Protein capicua homolog 2 FAELPEFRPEEVLPS(0.621)PT(0.144)LQS(0.189)LAT(0.401)S(0.644)PR 56.474 0.019254 3346700 7363.6 10257 9773.2 12358 8598.8 10049 8068.3 7663.2 7398.5 7901 TRUE FALSE 7927.362878 9747.652295 10099.03361 11348.31187 8261.167906 10431.42174 7008.922518 8664.806552 8042.008157 7643.191017 1.037179741 1.275338046 1.321311163 1.484760991 1.080853257 1.364799298 0.917015223 1.133663483 1.052179402 1 12.89995937 -7.258221113 24.99615704 1.03685315 1.266135952 0.432896408 0.131429607 285.1283839 2214590.014 0.051514319 0.038187202 5.52E-08 7.258221113 0.229282802 FAELPEFRPEEVLPS(ph)PTLQSLATSPR ddPTM_A459_MK2206_30min_R1 1 FAELPEFRPEEVLPSPTLQSLATSPR 26 1 I3L2J0;A0A0A0MQR4;Q96RK0;I3L135;I3L1Q4;I3L373 I3L2J0 CIC Protein capicua homolog 1 FAELPEFRPEEVLPS(0.854)PT(0.028)LQS(0.084)LAT(0.017)S(0.017)PR 53.381 0.0083884 12070000 1323.9 1471.5 1520.6 1270.7 1580.9 1383.6 1556.4 1515.5 1177 1351.7 TRUE FALSE 1211.295353 1375.705083 1417.385909 1368.569534 1517.929405 1461.938236 1452.575396 1502.250143 1299.353362 1519.158801 0.797346105 0.905570294 0.933007075 0.900873255 0.999190739 0.962334047 0.956170872 0.988869723 0.855311085 1 10.56905697 -3.706419585 0.875262583 0.955268272 5.15E-10 0.551537698 0.042095207 9.144898967 1.306077012 0.013838071 12.99972697 0.000196599 3.706419585 -0.955268272 FAELPEFRPEEVLPSPTLQSLATS(ph)PR ddPTM_A459_MK2206_30min_R1 1 FAELPEFRPEEVLPSPTLQSLATSPR 26 1 I3L2J0;A0A0A0MQR4;Q96RK0;I3L135;I3L1Q4;I3L373 I3L2J0 CIC Protein capicua homolog 1 FAELPEFRPEEVLPSPTLQS(0.018)LAT(0.256)S(0.725)PR 139.56 1.42E-09 7040400 1104.5 876.18 1084.5 875.99 1325.2 949.23 1189.9 1054.5 746.13 775.37 TRUE FALSE 1010.556475 819.1405227 1010.887162 943.4589016 1272.414478 1002.974582 1110.523942 1045.280618 823.6928836 871.4286893 1.159654814 0.939997194 1.160034291 1.082657609 1.460147564 1.150954283 1.274371564 1.199502186 0.945221214 1 9.7672388 -3.697079609 13.12154762 1.149591301 45.30105467 0 0.150755792 0 0 0.034770937 0 0.000200872 3.697079609 44.15146337 FAGHSEAGGGS(ph)GDR ddPTM_A459_MK2206_30min_R1 3 FAGHSEAGGGSGDR 14 0 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 FAGHS(0.001)EAGGGS(0.999)GDR;FAGHSEAGGGS(1)GDR;FAGHS(0.059)EAGGGS(0.941)GDR 118.51 0.0023485 16540600 5122.93 4873.59 4671.71 3728.8 4952.18 4663.69 4938.15 4547.17 4101.5 4360.73 TRUE FALSE 4687.197902 4556.318405 4354.607341 4015.992822 4754.924184 4927.744098 4608.735024 4507.414572 4527.865602 4900.970154 0.956381646 0.929676832 0.888519457 0.819428133 0.9702006 1.005462988 0.940371983 0.919698433 0.923871287 1 12.25885165 FAGHSEAGGGS(ph)GDR ddPTM_A459_MK2206_30min_R2 4 FAGHSEAGGGSGDR 14 0 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 FAGHSEAGGGS(1)GDR;FAGHSEAGGGS(1)GDR;FAGHSEAGGGS(1)GDR;FAGHSEAGGGS(1)GDR 125.22 0.0013974 17561100 50089.3 57013.4 45552.3 55234.2 55958.1 60016.6 63748.5 49296.9 49716.7 53926.9 TRUE FALSE 53924.17532 54182.19746 47070.99095 50721.38917 53760.90383 62300.57377 55378.24537 55740.17409 54040.9687 52167.26967 1.033678313 1.038624367 0.902308885 0.972283761 1.030548544 1.194246396 1.061551538 1.068489389 1.035917138 1 15.67085731 -6.524810648 24.9993934 1.07974718 0.986528211 0.317980655 0.058379376 71.50032196 925216.4868 0.019721893 0.01984816 2.99E-07 6.524810648 -0.093218969 FAGHSEAGGGSGDR ddPTM_A459_MK2206_30min_R2 1 FAGHSEAGGGSGDR 14 0 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 0 83.243 0.039604 1467700 3787.6 3979.6 3681.4 4081.8 5039.5 3495.6 4833.3 3834.7 3722 3016.5 FALSE TRUE 4077.581568 3781.978851 3804.136039 3748.303883 4841.623909 3628.627507 4198.681904 4335.908456 4045.732832 2918.071852 1.397354752 1.296054053 1.303647145 1.28451391 1.659185981 1.243501768 1.438854873 1.48588132 1.386440443 1 11.51079969 -10.2795998 4.277499067 0.99999816 1.388174758 0.505209005 0.11530672 14206658.32 34094574.86 442.9351606 0.028647192 5.25E-11 10.2795998 0.388176599 FAIQDIS(ph)VEETSAK ddPTM_A459_MK2206_30min_R1 4 FAIQDISVEETSAK 14 0 O43707;G3V2E8;P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;G3V2N5;Q08043;G3V2W4;A0A087WSZ2;A0A494C033;A0A494C166;G3V2X9;G3V5M4 O43707;P12814-4 ACTN4;ACTN1;ACTN2;ACTN3 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3 1 FAIQDIS(1)VEETSAK;FAIQDIS(0.999)VEET(0.001)SAK;FAIQDIS(0.997)VEET(0.002)S(0.001)AK;FAIQDIS(1)VEETSAK 203.05 3.98E-05 65575000 23453.1 25834.1 26993.5 21510.5 23647.9 21890 22862.9 23001.6 22075.8 19676.2 TRUE FALSE 21458.29069 24152.29539 25161.25643 23167.24244 22705.95407 23129.39288 21337.75766 22800.49944 24370.65841 22113.8362 0.970355866 1.092180261 1.137806041 1.047635617 1.0267759 1.045924039 0.964905295 1.031051294 1.102054758 1 14.4326617 -5.994882962 24.93794025 1.028564813 1.073220698 0.099873867 0.050687164 292.0783987 1423418.041 0.014575244 0.021540499 1.01E-06 5.994882962 0.044655885 FAIQDIS(ph)VEETSAK ddPTM_A459_MK2206_30min_R2 4 FAIQDISVEETSAK 14 0 O43707;G3V2E8;P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;G3V2N5;Q08043;G3V2W4;A0A087WSZ2;A0A494C033;A0A494C166;G3V2X9;G3V5M4 O43707;P12814-4 ACTN4;ACTN1;ACTN2;ACTN3 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3 1 FAIQDIS(0.579)VEET(0.109)S(0.312)AK;FAIQDIS(0.999)VEET(0.001)SAK;FAIQDIS(0.99)VEET(0.009)S(0.001)AK;FAIQDIS(0.987)VEET(0.01)S(0.003)AK 194.32 0.00011971 16328800 97435 110405 105189 113380 119297 86669 123691 88555 92019 113374 TRUE FALSE 104894.6985 104922.4482 108695.9488 104116.4913 114612.8004 89967.24953 107450.2231 100129.4426 100022.6463 109674.6157 0.956417288 0.956670307 0.991076632 0.949321688 1.045025776 0.820310598 0.979718255 0.912968256 0.9119945 1 16.74287013 -6.734884391 24.99998244 0.922978656 0.97736682 0.220148523 0.051315446 338.9112469 319064.4945 0.01592795 0.015923638 1.84E-07 6.734884391 0.054388163 FAIQDISVEETSAK ddPTM_A459_MK2206_30min_R1 2 FAIQDISVEETSAK 14 0 O43707;G3V2E8;P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;G3V2N5;Q08043;G3V2W4;A0A087WSZ2;A0A494C033;A0A494C166;G3V2X9;G3V5M4 O43707;P12814-4 ACTN4;ACTN1;ACTN2;ACTN3 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3 0 ; 255.24 4.77E-27 18801900 5048.8 5267.1 5491.6 5142 5010.1 4870.1 4715.6 4981.6 3569.3 3796.8 FALSE TRUE 4619.373048 4924.210833 5118.845492 5538.037731 4810.537108 5145.840853 4401.030928 4938.046396 3940.341508 4267.176248 1.082536267 1.153974091 1.199586142 1.29782259 1.127334993 1.205912424 1.031368444 1.157216414 0.923407255 1 12.05906598 -7.840787148 1.097192758 0.975314318 1.180864248 0.509611833 0.073510173 0.417445133 0.907347389 0.064327853 0.02453693 1.44E-08 7.840787148 0.20554993 FALVT(ph)PK ddPTM_A459_MK2206_30min_R2 1 FALVTPK 7 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 FALVT(1)PK 105.52 0.040957 31528000 73042 67385 67562 58978 62865 48943 79928 51140 45119 61914 TRUE FALSE 78634.15168 64038.75889 69814.48336 54159.30874 60396.60423 50805.56016 69433.35759 57824.17359 49043.36906 59893.75125 1.312894084 1.069206011 1.16563885 0.904256414 1.00839575 0.848261448 1.159275486 0.96544585 0.818839496 1 15.87011787 -1.522892367 0.595260574 0.958280729 22.02718187 0.515535805 0.102156202 137.0777241 1.079935776 0.045910617 3750.95337 0.029999059 1.522892367 21.06890114 FAMEPEEFDSDTLR ddPTM_A459_MK2206_30min_R1 2 FAMEPEEFDSDTLR 14 0 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 ; 231.17 7.95E-14 3258000 1450.24 1411.67 1201.42 1216.09 1286.27 1345.1 1470.32 1509.42 1176.77 1375.34 FALSE TRUE 1326.889472 1319.770026 1119.870958 1309.753463 1235.035142 1421.2584 1372.237636 1496.2233 1299.099453 1545.727502 0.858423927 0.85381804 0.724494425 0.847337878 0.798999267 0.919475391 0.887761674 0.967973526 0.840445325 1 10.59407029 -6.766751975 24.98146767 0.918918954 0.815270604 0.493673067 0.05384346 113.7979266 535109.1867 0.018027759 0.016364654 1.71E-07 6.766751975 -0.10364835 FAMEPEEFDSDTLR ddPTM_A459_MK2206_30min_R2 1 FAMEPEEFDSDTLR 14 0 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 223.08 5.65E-08 2860500 9003.1 12021 11278 13625 11544 11200 11106 9677.9 10152 9747.5 FALSE TRUE 9692.384258 11424.05462 11654.00289 12511.79392 11090.72456 11626.22385 9647.768859 10942.83476 11035.00261 9429.439873 1.027885472 1.211530565 1.235916772 1.326886229 1.176180633 1.232970781 1.023153972 1.160496796 1.170271274 1 13.20295636 -7.241887102 24.87948178 1.101855236 1.208392075 0.2885668 0.085860712 1088.408203 1384957.12 0.033332672 0.025785864 5.73E-08 7.241887102 0.106536839 FANLT(ph)PSR ddPTM_A459_MK2206_30min_R1 1 FANLTPSR 8 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 FANLT(1)PSR 115.23 0.023255 15241000 4866.4 4315.1 4171.1 3465.2 4537.8 3895.3 3624.8 3091.7 2843.6 2648.9 TRUE FALSE 4452.487126 4034.186206 3887.977353 3732.090304 4357.049817 4115.84852 3382.996206 3064.669593 3139.202396 2977.06573 1.495595841 1.355088054 1.305976322 1.253613673 1.463538333 1.382518524 1.136352541 1.029426244 1.054461903 1 11.53967536 -7.401101844 3.09277106 1.035146339 1.370967614 0.849728561 0.067133283 0.105731937 1.919340487 0.033928147 0.021088264 3.97E-08 7.401101844 0.335821275 FANLTPS(ph)R ddPTM_A459_MK2206_30min_R1 1 FANLTPSR 8 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 FANLT(0.422)PS(0.578)R 86.189 0.034221 16768000 5170.2 3897.7 3746.2 3295.3 3918.1 3402 3622 3221.5 3259.2 2844.5 TRUE FALSE 4730.44734 3643.959022 3491.918382 3549.104577 3762.03378 3594.6183 3380.382989 3193.334765 3598.005503 3196.898135 1.479699115 1.139842081 1.09228328 1.110171306 1.176776244 1.124408145 1.057394651 0.998885367 1.125467673 1 11.64245706 -4.750661619 3.435179147 1.090921588 1.544357325 0.831371236 0.052876265 0.140384423 2.541578553 0.014054132 0.175182037 1.78E-05 4.750661619 0.453435738 FANLTPS(ph)R ddPTM_A459_MK2206_30min_R2 1 FANLTPSR 8 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 FANLT(0.114)PS(0.886)R 86.189 0.034221 18891000 78872 81702 95808 90579 65777 67568 73631 42411 55842 83844 TRUE FALSE 84910.50096 77644.79749 99002.1909 83178.40595 63194.26448 70139.34759 63963.16125 47954.26332 60699.03622 81108.17715 1.046879661 0.957299254 1.220619109 1.025524292 0.779135553 0.864762963 0.788615445 0.591238331 0.748371352 1 16.30755975 -6.224984387 4.296418389 0.776632343 1.071281 0.56870978 0.113737215 0.153223885 6.548108587 0.035283586 0.044817007 5.96E-07 6.224984387 0.294648657 FAPSAPSPHHIS(ph)PR ddPTM_A459_MK2206_30min_R2 1 FAPSAPSPHHISPR 14 0 Q8NEA6-2;Q8NEA6 Q8NEA6-2 GLIS3 Zinc finger protein GLIS3 1 FAPSAPSPHHIS(1)PR 81.606 0.035978 0 11898 21967 19799 25721 27928 34386 26463 19793 22910 27984 TRUE FALSE 12808.92003 20876.15072 20459.08878 23619.51202 26831.40639 35694.58333 22988.37631 22380.01306 24902.67039 27070.88437 0.47316223 0.771166189 0.755759897 0.87250611 0.99115367 1.318559927 0.849191921 0.826718948 0.919906053 1 14.7244544 -4.779447388 0.872829623 0.97656411 0.232450028 0.560652173 0.135399173 1.947123431 1.145073063 0.053449993 1.400462982 1.66E-05 4.779447388 -0.744114082 FAQSAPGS(ph)PLSSQPVLITVQR ddPTM_A459_MK2206_30min_R1 2 FAQSAPGSPLSSQPVLITVQR 21 0 Q01167-2;Q01167 Q01167-2 FOXK2 Forkhead box protein K2 1 FAQSAPGS(0.995)PLS(0.005)SQPVLITVQR;FAQS(0.003)APGS(0.99)PLS(0.005)S(0.001)QPVLITVQR 364.72 2.82E-218 153990000 14991.4 13854.1 13712.1 12176.4 14491.7 12949.5 15393.6 15972.6 14147.2 12131.2 TRUE FALSE 13716.30271 12952.19557 12781.36086 13114.22844 13914.4649 13682.6895 14366.72103 15832.95324 15617.85207 13634.10464 1.006028857 0.949985049 0.937455095 0.961869428 1.020563159 1.00356348 1.053734103 1.161275614 1.145498914 1 13.73493234 -7.216314059 1.566342605 1.113558586 0.96861285 0.576740176 0.047205507 0.255365138 1.227852337 0.026098326 0.016298987 6.08E-08 7.216314059 -0.144945736 FAQSAPGS(ph)PLSSQPVLITVQR ddPTM_A459_MK2206_30min_R2 2 FAQSAPGSPLSSQPVLITVQR 21 0 Q01167-2;Q01167 Q01167-2 FOXK2 Forkhead box protein K2 1 FAQSAPGS(0.99)PLS(0.008)S(0.002)QPVLITVQR;FAQSAPGS(0.977)PLS(0.022)S(0.001)QPVLITVQR 196.75 1.67E-16 165124000 184857 196488 199077 204127 204752 212596 255459 196002 202242 226959 TRUE FALSE 199009.7941 186730.6916 205714.1278 187449.1711 196712.4077 220686.4898 221916.9264 221620.1344 219832.6436 219553.3464 0.906430247 0.850502599 0.936966488 0.853775058 0.895966338 1.00516113 1.010765402 1.009413603 1.001272115 1 17.744212 -6.748960046 5.62755908 1.006769714 0.886587464 0.862388882 0.023300378 0.054390657 5.451352467 0.007494823 0.007138936 1.78E-07 6.748960046 -0.12018225 FARKGKK ddPTM_A459_MK2206_30min_R1 1 FARKGKK 7 3 P36537-2;P36537;Q9BY64;O75310 P36537-2 UGT2B10;UGT2B28;UGT2B11 UDP-glucuronosyltransferase 2B10;UDP-glucuronosyltransferase 2B28;UDP-glucuronosyltransferase 2B11 0 74.517 0.03616 0 1928 2384.2 2373.7 1953.8 1925.2 1748.3 2199.5 2060.8 2166.3 1955.5 FALSE TRUE 1764.013476 2228.988147 2212.579858 2104.282015 1848.515207 1847.287235 2052.775368 2042.782643 2391.494637 2197.762103 0.802640774 1.014208109 1.006742201 0.957465784 0.841089763 0.840531026 0.934029832 0.929483059 1.088149911 1 11.10181951 -8.1941259 6.849859938 1.043463708 0.918662858 0.353055931 0.069417481 0.270512906 23.10757369 0.050726713 0.018732492 6.40E-09 8.1941259 -0.124800849 FAS(ph)DDEHDEHDENGATGPVK ddPTM_A459_MK2206_30min_R1 10 FASDDEHDEHDENGATGPVK 20 0 P05455 P05455 SSB Lupus La protein 1 FAS(1)DDEHDEHDENGATGPVK;FAS(0.999)DDEHDEHDENGAT(0.001)GPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(0.993)DDEHDEHDENGAT(0.007)GPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK 147 1.50E-05 1143110000 42889.3 48652.6 45965.4 35360.6 34520.1 35121.9 45075.2 35380.3 52149.9 58441.3 TRUE FALSE 39241.33981 45485.3069 42845.39671 38084.07954 33145.09132 37110.47163 42068.31565 35070.97377 57571.06873 65681.44945 0.597449358 0.69251375 0.652321121 0.579830072 0.504633981 0.565006892 0.640490062 0.533955539 0.876519462 1 16.00319834 -8.412477789 3.800773477 0.995876128 0.598163451 0.867884884 0.054301021 0.077250843 1.882748085 0.056851902 0.015006746 3.87E-09 8.412477789 -0.397712677 FAS(ph)DDEHDEHDENGATGPVK ddPTM_A459_MK2206_30min_R2 9 FASDDEHDEHDENGATGPVK 20 0 P05455 P05455 SSB Lupus La protein 1 FAS(0.999)DDEHDEHDENGAT(0.001)GPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(0.995)DDEHDEHDENGAT(0.005)GPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK 134.8 7.74E-05 3125398000 3139033 2448880 2625128 2554842 2238762 1893971 3089566 2277876 1833838 2860249 TRUE FALSE 3379359.78 2327272.18 2712648.457 2346103.236 2150856.955 1966047.394 2683902.273 2575602.214 1993341.914 2766919.309 1.221343813 0.841105909 0.98038582 0.847911693 0.777347192 0.710554654 0.969996582 0.930855557 0.720419243 1 21.39984914 -2.747416963 1.540977414 0.855273687 199.9999995 0.51180213 0.102436817 634.3985969 3.639704534 0.02867284 444603.1209 0.001788888 2.747416963 199.1447259 FAS(ph)DDEHDEHDENGATGPVKR ddPTM_A459_MK2206_30min_R1 15 FASDDEHDEHDENGATGPVKR 21 1 P05455 P05455 SSB Lupus La protein 1 FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR 138.09 1.41E-05 2020907300 81209.9 90552.1 85668.48 76949.59 75819 63745.28 72612.18 77263.4 70347.72 61666.09 TRUE FALSE 74302.57155 84657.14183 79853.54226 82876.26075 72798.96868 67354.48267 67768.35396 76587.89424 77660.61724 69305.75078 1.072098213 1.221502413 1.152192154 1.195806406 1.050403002 0.971845509 0.977817182 1.105072716 1.12055084 1 16.08068745 -6.321005363 6.346311862 1.035833618 1.16404684 0.517269099 0.058106555 0.194045174 16.40421673 0.019004043 0.021687792 4.78E-07 6.321005363 0.128213222 FAS(ph)DDEHDEHDENGATGPVKR ddPTM_A459_MK2206_30min_R2 6 FASDDEHDEHDENGATGPVKR 21 1 P05455 P05455 SSB Lupus La protein 1 FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR 136.92 1.62E-05 2033014000 485664 697801 562722 677519 729864 556453 692459 562020.2 496412 622646 TRUE FALSE 522846.8093 663149.217 581482.8706 622163.5304 701205.8721 577629.2088 601538.3015 635478.1698 539589.0185 602329.112 0.868041738 1.100974872 0.965390613 1.032929536 1.164157365 0.958992679 0.998687079 1.055034793 0.895837521 1 19.20019246 -10.14769673 10.22826898 1 1.011656045 0 0.08525837 0 0 0.078698222 0.019087122 7.12E-11 10.14769673 0.011656045 FATHAAALS(ph)VR ddPTM_A459_MK2206_30min_R2 1 FATHAAALSVR 11 0 P23246;P23246-2 P23246 SFPQ "Splicing factor, proline- and glutamine-rich" 1 FATHAAALS(1)VR 72.681 0.039608 2204500 15634 17650 12061 21313 18042 15288 19902 20192 14671 14469 TRUE FALSE 16830.95106 16773.52667 12463.10772 19571.65972 17333.58043 15869.79555 17288.84349 22831.16373 15947.05706 13996.87771 1.202478967 1.19837631 0.890420562 1.398287541 1.238389074 1.133809688 1.235192866 1.631161191 1.139329598 1 13.77281742 -5.783108154 24.99924553 1.273627576 1.107220117 0.130466073 0.179703182 436.6199283 503726.3865 0.050381259 0.074800544 1.65E-06 5.783108154 -0.166407459 FAVLHGEAPR ddPTM_A459_MK2206_30min_R2 1 FAVLHGEAPR 10 0 P55884;P55884-2 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B 0 99.788 0.025123 0 21055 28462 23934 31547 28691 31173 30823 23482 25032 30394 FALSE TRUE 22666.98699 27048.61847 24731.94761 28969.50919 27564.44718 32359.31036 26775.90307 26551.17803 27209.23811 29402.24627 0.77092705 0.919950749 0.84115844 0.985282176 0.937494603 1.100572727 0.910675424 0.903032298 0.925413585 1 14.84363876 -3.656881706 0.737955683 0.961733152 6.37E-06 0.442892736 0.063124147 12.55764212 1.473419988 0.024923866 14.68574459 0.000220353 3.656881706 -0.961726785 FCDS(ph)PTSDLEMR ddPTM_A459_MK2206_30min_R1 2 FCDSPTSDLEMR 12 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 FCDS(0.647)PT(0.239)S(0.114)DLEMR;FCDS(0.478)PT(0.252)S(0.27)DLEMR 203.87 4.11E-05 32414000 4992 4338.5 4349.3 4168.3 5257.4 4422.9 5272.8 4434.2 4138.7 3763 TRUE FALSE 4567.404186 4056.062861 4054.081634 4489.343188 5047.986625 4673.320776 4921.061133 4395.432257 4568.932675 4229.188849 1.07997168 0.959064021 0.958595555 1.061514004 1.19360634 1.105015865 1.163594559 1.03930858 1.080333094 1 12.04616527 -5.9707746 7.082849804 1.104914718 0.996945141 0.335725949 0.060857401 0.187569033 32.22820391 0.017154412 0.025261968 1.07E-06 5.9707746 -0.107969577 FCDS(ph)PTSDLEMR ddPTM_A459_MK2206_30min_R2 2 FCDSPTSDLEMR 12 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 FCDS(0.933)PT(0.045)S(0.023)DLEMR;FCDS(0.807)PT(0.125)S(0.068)DLEMR 201.09 8.47E-05 20875800 51035 58343 53450 60598 57741 57887 64634 46573 52160 63226 TRUE FALSE 54942.27884 55445.77146 55231.99632 55646.94956 55473.79821 60089.93035 56147.47816 52660.25101 56696.78252 61162.9408 0.898293609 0.906525598 0.903030423 0.909814813 0.906983829 0.982456526 0.917998341 0.86098298 0.92697934 1 15.90037015 -6.564816419 24.99861487 0.929648503 0.90495899 0.157205438 0.035594951 367.400459 219001.3457 0.012036396 0.0120364 2.72E-07 6.564816419 -0.024689513 FCDSPT(ph)SDLEMR ddPTM_A459_MK2206_30min_R1 2 FCDSPTSDLEMR 12 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 FCDS(0.009)PT(0.642)S(0.349)DLEMR;FCDS(0.3)PT(0.427)S(0.273)DLEMR 187.62 0.0002424 12405200 2675.66 2709.6 3014.3 2300.97 2679.86 2601.9 2713.2 2261.31 2296.89 2022.08 TRUE FALSE 2448.081067 2533.204548 2809.697714 2478.191108 2573.115502 2749.217329 2532.207379 2241.539605 2535.659935 2272.590536 1.077220479 1.114677064 1.236341378 1.090469695 1.132238941 1.209728407 1.114238284 0.986336768 1.1157575 1 11.15012205 -7.583236739 6.919921196 1.039387136 1.144957531 0.431918358 0.056034372 0.208998868 19.19273659 0.026104645 0.01497893 2.61E-08 7.583236739 0.105570395 FCFTPHTEEGCLSER ddPTM_A459_MK2206_30min_R1 1 FCFTPHTEEGCLSER 15 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 0 93.237 0.017816 5117600 2286.1 2698.6 2562.9 2187.8 2691.2 2018.1 2244.1 2103.2 1945.7 1786.1 FALSE TRUE 2091.65519 2522.92065 2388.937489 2356.304735 2584.003805 2132.363078 2094.400184 2084.811944 2147.962478 2007.375552 1.041984988 1.256825434 1.190079996 1.173823569 1.287254795 1.062264147 1.043352442 1.038575936 1.070035189 1 10.97109484 -6.887943818 7.672910312 1.04295379 1.192509216 0.583998812 0.06226539 0.164036115 10.44412315 0.021110928 0.018623408 1.29E-07 6.887943818 0.149555426 FCGVNETENEDNTNRDS(ph)PIFDYSPR ddPTM_A459_MK2206_30min_R1 1 FCGVNETENEDNTNRDSPIFDYSPR 25 1 F8W9J4;Q03001;Q03001-9 F8W9J4 DST Dystonin 1 FCGVNETENEDNT(0.04)NRDS(0.96)PIFDYSPR 106.58 1.62E-07 7688200 218.75 325.16 245.47 264.84 293.27 382.15 285.56 358.49 249.98 187.68 TRUE FALSE 200.1441638 303.9920249 228.8081803 285.2380227 281.5884349 403.7870028 266.5108134 355.3557597 275.9663156 210.9312153 0.948859862 1.441190316 1.084752581 1.352279805 1.33497754 1.91430653 1.263496316 1.684699722 1.308323736 1 7.720628802 -6.109600188 2.445416051 1.471579774 1.188809679 0.141674787 0.261912437 0.490516994 5.749821269 0.078688344 0.110993449 7.77E-07 6.109600188 -0.282770096 FCIWTES(ph)AFR ddPTM_A459_MK2206_30min_R1 2 FCIWTESAFR 10 0 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 1 FCIWTES(1)AFR;FCIWT(0.002)ES(0.998)AFR 123.96 0.0039915 6887600 3784.8 4021.9 3646.1 3263.8 3370.9 2989.8 3087.7 3365.4 3273.5 2343.95 TRUE FALSE 3462.882885 3760.073579 3398.612891 3515.178442 3236.629915 3159.079892 2881.725167 3335.976663 3613.792039 2634.336222 1.314518191 1.427332452 1.290121156 1.334369703 1.228632051 1.199193886 1.093909404 1.266344301 1.371803648 1 11.36322377 -6.247762581 1.864929205 1.196522293 1.353908789 0.359293707 0.097796098 0.419509353 2.871589519 0.034107402 0.045340232 5.65E-07 6.247762581 0.157386496 FDDMS(ph)SPGLELPSCELSR ddPTM_A459_MK2206_30min_R1 1 FDDMSSPGLELPSCELSR 18 0 Q6IN85-2;Q6IN85;H0YIY8;G3V5Z3;Q6IN85-5;G3V231 Q6IN85-2 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A 1 FDDMS(0.551)S(0.449)PGLELPSCELSR 95.767 0.0081473 0 493.75 439.91 229.32 274.26 264.64 463.3 560.1 387.07 437.07 535.32 TRUE FALSE 451.7539697 411.271779 213.7543973 295.3835527 254.0988284 489.5316456 522.736751 383.6858878 482.5049906 601.6394831 0.750871548 0.683585088 0.355286518 0.490964375 0.422344004 0.813662766 0.8688538 0.63773389 0.801983587 1 9.232755438 -6.775652815 24.93309521 0.804580695 0.535499483 0.517498467 0.13631786 211.6220237 371223.337 0.050298714 0.044568286 1.68E-07 6.775652815 -0.269081212 FDGSENRPFS(ph)PSPLNNISSTVTVK ddPTM_A459_MK2206_30min_R1 2 FDGSENRPFSPSPLNNISSTVTVK 24 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 FDGS(0.037)ENRPFS(0.836)PS(0.037)PLNNIS(0.065)S(0.023)T(0.001)VTVK;FDGS(0.084)ENRPFS(0.895)PS(0.016)PLNNIS(0.004)S(0.001)T(0.001)VTVK 63.165 0.0024124 98983000 4164.1 4011.4 3945 4081 4258 3336.9 4222.6 4203.4 4437.1 3678.2 TRUE FALSE 3809.921428 3750.257131 3677.224391 4395.319327 4088.394844 3525.832394 3940.918059 4166.650117 4898.352423 4133.883185 0.921632581 0.90719959 0.889532729 1.063242267 0.98899622 0.852910505 0.953321098 1.007926429 1.184927634 1 12.01328191 -7.985014551 3.968926876 1.095590504 0.940592113 0.441493174 0.06843223 0.192759615 6.788389156 0.045733161 0.018466912 1.04E-08 7.985014551 -0.154998391 FDGSENRPFS(ph)PSPLNNISSTVTVK ddPTM_A459_MK2206_30min_R2 2 FDGSENRPFSPSPLNNISSTVTVK 24 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 FDGS(0.03)ENRPFS(0.613)PS(0.338)PLNNIS(0.012)S(0.005)T(0.001)VTVK;FDGS(0.008)ENRPFS(0.976)PS(0.016)PLNNISSTVTVK 66.122 0.0014541 61494000 110599 114994 122513 123277 116156 118257 155643 90964 106766 136490 TRUE FALSE 119066.5445 109283.5652 126597.5223 113204.8748 111595.1318 122757.353 135206.8871 102853.3071 116052.3137 132036.3425 0.901770999 0.827677919 0.958808158 0.857376633 0.845184967 0.929723974 1.024012667 0.778977251 0.878942203 1 17.01057555 -6.781257747 24.97653947 0.914872387 0.878684361 0.083793842 0.070899967 832.7713276 1049511.597 0.025476264 0.022499091 1.65E-07 6.781257747 -0.036188026 FDHILYTGS(ph)TGVGK ddPTM_A459_MK2206_30min_R2 1 FDHILYTGSTGVGK 14 0 P30838;A8MYB8;C9JMC5;I3L3I9;E9PNN6;C9JKT2 P30838 ALDH3A1 "Aldehyde dehydrogenase, dimeric NADP-preferring" 1 FDHILYT(0.006)GS(0.932)T(0.062)GVGK 107.62 0.0034037 4133600 23441 29728 25867 25356 20873 25944 34888 21669 18844 31936 TRUE FALSE 25235.66098 28251.75075 26729.39287 23284.33369 20053.42114 26931.3171 30307.16369 24501.2127 20483.01706 30893.93094 0.816848495 0.914475753 0.865198829 0.753686339 0.649105521 0.871734878 0.981007038 0.793075273 0.663011033 1 14.91503583 -10.51288391 4.315468412 1.000007532 0.816256268 0.243812418 0.099065288 21345207.79 8668400.967 1544.467571 0.02564078 3.07E-11 10.51288391 -0.183751264 FDHILYTGST(ph)GVGK ddPTM_A459_MK2206_30min_R2 1 FDHILYTGSTGVGK 14 0 P30838;A8MYB8;C9JMC5;I3L3I9;E9PNN6;C9JKT2 P30838 ALDH3A1 "Aldehyde dehydrogenase, dimeric NADP-preferring" 1 FDHILYTGS(0.415)T(0.585)GVGK 125.41 0.0018737 1801600 26282 29488 23929 30604 22959 18765 29544 24155 19116 28207 TRUE FALSE 28294.17013 28023.6688 24726.78092 28103.5553 22057.5143 19479.11522 25664.83731 27312.14144 20778.67513 27286.6079 1.036925155 1.027011818 0.906187424 1.0299395 0.808364102 0.713870896 0.940565328 1.000935753 0.761497186 1 14.73590544 -6.254980729 24.82689797 0.866553588 0.995242213 0.30450292 0.095373244 641.8579104 2467283.701 0.029295165 0.036893209 5.56E-07 6.254980729 0.128688624 FDHILYTGSTGVGK ddPTM_A459_MK2206_30min_R2 1 FDHILYTGSTGVGK 14 0 P30838;A8MYB8;C9JMC5;I3L3I9;E9PNN6;C9JKT2 P30838 ALDH3A1 "Aldehyde dehydrogenase, dimeric NADP-preferring" 0 142.1 0.00077115 5718000 35320 61031 55402 53914 55286 54915 55060 45992 57303 47123 FALSE TRUE 38024.12636 58000.28929 57249.07503 49509.05374 53115.19385 57004.82881 47830.55586 52003.31231 62287.11136 45585.38037 0.834129847 1.27234409 1.255864809 1.086073064 1.165180446 1.250506815 1.049252095 1.140789259 1.366383495 1 15.47628359 -4.751678484 24.93563123 1.178339022 0.834129134 0.480236925 0.106761668 330.3347169 843827.9131 0.025676905 0.329768477 1.77E-05 4.751678484 -0.344209887 FDIYDPFHPTDEAYS(ph)PPPAPEQK ddPTM_A459_MK2206_30min_R1 8 FDIYDPFHPTDEAYSPPPAPEQK 23 0 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 FDIYDPFHPT(0.004)DEAY(0.449)S(0.547)PPPAPEQK;FDIYDPFHPT(0.008)DEAY(0.442)S(0.55)PPPAPEQK;FDIYDPFHPTDEAY(0.001)S(0.999)PPPAPEQK;FDIYDPFHPT(0.001)DEAY(0.452)S(0.547)PPPAPEQK;FDIYDPFHPTDEAY(0.138)S(0.862)PPPAPEQK;FDIYDPFHPTDEAY(0.059)S(0.941)PPPAPEQK;FDIYDPFHPTDEAY(0.001)S(0.999)PPPAPEQK;FDIYDPFHPT(0.017)DEAY(0.456)S(0.528)PPPAPEQK 166.36 2.46E-12 611121400 39531.22 39874.45 40673.12 34391.08 40162.13 36627.63 38944.94 39375.45 36565.92 30433.13 TRUE FALSE 36168.88215 37278.61606 37912.34194 37039.88694 38562.38732 38701.45476 36346.99411 39031.19459 40367.07824 34203.4159 1.057464034 1.089909153 1.108437299 1.082929467 1.127442576 1.131508469 1.062671466 1.141149022 1.180206046 1 15.06185279 -2.842139862 0.770468617 1.11107956 1.44E-06 0.074562507 0.04664032 105.186248 3.834457764 0.016461393 182.8194511 0.001438335 2.842139862 -1.111078116 FDIYDPFHPTDEAYS(ph)PPPAPEQK ddPTM_A459_MK2206_30min_R2 7 FDIYDPFHPTDEAYSPPPAPEQK 23 0 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 FDIYDPFHPTDEAY(0.064)S(0.936)PPPAPEQK;FDIYDPFHPTDEAY(0.062)S(0.938)PPPAPEQK;FDIYDPFHPTDEAY(0.009)S(0.991)PPPAPEQK;FDIYDPFHPTDEAY(0.146)S(0.854)PPPAPEQK;FDIYDPFHPT(0.094)DEAY(0.434)S(0.471)PPPAPEQK;FDIYDPFHPTDEAY(0.084)S(0.916)PPPAPEQK;FDIYDPFHPT(0.004)DEAY(0.454)S(0.542)PPPAPEQK 133.98 4.16E-06 224037500 287956.4 384720 325797.7 375021.3 380611.1 329039.1 412234.5 304158.6 315695.9 327971.8 TRUE FALSE 310002.5634 365615.3642 336659.6327 344380.8602 365666.3958 341560.9135 358107.615 343913.1734 343154.5587 317270.107 0.977093513 1.15237886 1.061113623 1.085450071 1.152539706 1.076561914 1.128715271 1.083975974 1.081584906 1 18.27535207 -1.634255836 20.63312284 1.087193803 0.036322233 0 0.055503254 0 0 0.011661704 0 0.023213689 1.634255836 -1.05087157 FDLDEEMGPPGSS(ph)PTPEPPQK ddPTM_A459_MK2206_30min_R1 2 FDLDEEMGPPGSSPTPEPPQK 21 0 Q969S2-2;Q969S2 Q969S2-2 NEIL2 Endonuclease 8-like 2 1 FDLDEEMGPPGS(0.056)S(0.907)PT(0.037)PEPPQK;FDLDEEMGPPGS(0.04)S(0.857)PT(0.102)PEPPQK 101.33 0.0001626 7330500 3526.1 3482.8 3620.7 3132.4 3331.9 3304 3656 3504.2 3623.5 3179 TRUE FALSE 3226.186679 3256.069087 3374.936972 3373.657991 3199.183368 3491.069625 3412.114911 3473.563149 4000.175792 3572.83852 0.902975788 0.911339561 0.944609434 0.94425146 0.895417845 0.977113744 0.955015149 0.972213866 1.119607217 1 11.802855 -8.055522339 4.314613211 1.059570476 0.934521538 0.660316647 0.035816816 0.127154436 4.788909132 0.024884976 0.009136257 8.80E-09 8.055522339 -0.125048938 FDLDEEMGPPGSS(ph)PTPEPPQK ddPTM_A459_MK2206_30min_R2 1 FDLDEEMGPPGSSPTPEPPQK 21 0 Q969S2-2;Q969S2 Q969S2-2 NEIL2 Endonuclease 8-like 2 1 FDLDEEMGPPGS(0.128)S(0.606)PT(0.266)PEPPQK 69.361 0.022393 0 7686.5 10614 9020.1 9791.3 12482 9214.5 10921 8703.5 8486.6 11853 TRUE FALSE 8274.98435 10086.92419 9320.825632 8991.319469 11991.89396 9565.164254 9487.059582 9841.077334 9224.749128 11466.23758 0.721682617 0.87970654 0.812893119 0.784156041 1.045843842 0.834202517 0.827390808 0.858265605 0.804514041 1 13.48510446 FDLMY(ph)AKR ddPTM_A459_MK2206_30min_R1 1 FDLMYAKR 8 1 Q9BQE3;F5H5D3;Q9NY65;Q9NY65-2;C9J2C0;V9GZ17;P68363;P68363-2;P68366-2;P68366;A6NHL2-2;A6NHL2 Q9BQE3;P68363;P68366-2;A6NHL2-2 TUBA1C;TUBA8;TUBA1B;TUBA4A;TUBAL3 Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha chain-like 3 1 FDLMY(1)AKR 82.305 0.014825 0 1162 1196.5 1754.2 1205.1 898.85 946.58 934.23 974 1589.6 2021.7 TRUE FALSE 1063.165798 1118.607633 1635.129791 1297.917011 863.0469012 1000.174542 871.9092213 965.4844207 1754.844608 2272.163459 0.467909029 0.492309489 0.719635634 0.571225193 0.379834865 0.440185999 0.383735254 0.424918558 0.772323224 1 11.14985091 -8.483430205 3.405279614 0.997496671 0.488451751 0.754627067 0.09569559 0.112483516 2.944350836 0.103769664 0.027473596 3.29E-09 8.483430205 -0.50904492 down FDLSHGS(ph)PQMVR ddPTM_A459_MK2206_30min_R1 2 FDLSHGSPQMVR 12 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0;A8MY87 KSR1 Kinase suppressor of Ras 1 1 FDLS(0.09)HGS(0.91)PQMVR;FDLS(0.071)HGS(0.929)PQMVR 73.834 0.035079 24509000 11150 10919.2 11923.2 9790.8 12166.9 11008.8 12674.4 12869.7 11628.5 12441 TRUE FALSE 10201.63395 10208.3581 11113.8864 10544.88911 11682.26661 11632.10874 11828.9139 12757.18157 12837.32419 13982.285 0.729611358 0.730092263 0.794854804 0.754160647 0.835504827 0.831917583 0.845992904 0.912381743 0.918113469 1 13.77131253 -7.226016778 0.292812307 1.019207781 0.682461673 0.949740462 0.018824947 0.387844192 0.090558551 0.02937452 0.047185131 5.94E-08 7.226016778 -0.336746108 FDLSHGS(ph)PQMVR ddPTM_A459_MK2206_30min_R2 1 FDLSHGSPQMVR 12 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0;A8MY87 KSR1 Kinase suppressor of Ras 1 1 FDLS(0.024)HGS(0.976)PQMVR 99.796 0.0092854 19907000 92750 129330 130640 144890 124250 134220 125950 104970 134510 114620 TRUE FALSE 99851.01131 122907.6603 134995.4724 133052.0235 119371.3207 139327.8362 109412.6137 118689.9394 146209.4367 110879.9588 0.900532544 1.108474981 1.217492087 1.199964583 1.076581575 1.256564646 0.986766363 1.070436359 1.318628166 1 16.7586391 -4.774936515 4.169523963 1.142964058 0.879527786 0.323430716 0.103514745 0.25144719 8.673232508 0.025124094 0.199466506 1.68E-05 4.774936515 -0.263436272 FDPFGPIGTS(ph)PPGPRPDR ddPTM_A459_MK2206_30min_R2 2 FDPFGPIGTSPPGPRPDR 18 1 Q5QPM7 Q5QPM7 PSMF1 1 FDPFGPIGT(0.211)S(0.789)PPGPRPDR;FDPFGPIGT(0.298)S(0.702)PPGPRPDR 75.611 0.0084091 17104700 23498.1 24260.4 22268.3 24256.8 23771.4 29325.6 32403 25768 24369.6 35155 TRUE FALSE 25297.1326 23055.66381 23010.71401 22274.94185 22838.01539 30441.60626 28148.44718 29135.96607 26489.22376 34007.89523 0.743860578 0.677950331 0.676628584 0.654993251 0.671550393 0.895133499 0.827703302 0.856741233 0.778913943 1 15.0535821 -6.756670298 24.99995376 0.859995038 0.682473395 0.722706229 0.057585658 64.42421165 337717.331 0.01842862 0.017860835 1.75E-07 6.756670298 -0.177521643 FDQLFDDES(ph)DPFEVLK ddPTM_A459_MK2206_30min_R1 1 FDQLFDDESDPFEVLK 16 0 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 FDQLFDDES(1)DPFEVLK 129.05 0.00070662 0 173.66 262.61 234.17 152.07 201.7 150.35 179.7 291.31 332.51 250.77 TRUE FALSE 158.8893051 245.5140413 218.2751928 163.7824577 193.6658619 158.8626871 167.7125409 288.7631074 367.0756044 281.8372808 0.563762553 0.87111982 0.774472391 0.581124177 0.687154877 0.563668109 0.595068688 1.024573848 1.302438071 1 8.138718651 -7.880038562 4.497946042 1.154465318 0.66941587 0.758356585 0.116612681 0.101234416 3.454877826 0.068950474 0.031553734 1.32E-08 7.880038562 -0.485049447 FDSSLLS(ph)SDDETK ddPTM_A459_MK2206_30min_R1 3 FDSSLLSSDDETK 13 0 A0A494C0S2;A0A090HNM7;A0A1W2PS85;R4GMW8;P28715 A0A494C0S2 ERCC5-201;BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells 1 FDSS(0.002)LLS(0.499)S(0.499)DDETK;FDSS(0.009)LLS(0.496)S(0.496)DDETK;FDSSLLS(0.5)S(0.5)DDETK 194.98 3.32E-21 3832000 5202.8 6089.3 5968.5 5225.9 4437.3 3959.7 4554.3 4992 5229.2 4779 TRUE FALSE 4760.274539 5692.885463 5563.374849 5628.399723 4260.552945 4183.894792 4250.490957 4948.35547 5772.794053 5371.0586 0.886282369 1.059918703 1.035806023 1.047912552 0.793242685 0.778970237 0.791369314 0.921299848 1.074796327 1 12.39099075 -6.247642817 24.87836798 0.878533729 1.013248839 0.230137376 0.099948016 1036.439357 1868937.173 0.031189856 0.040051723 5.65E-07 6.247642817 0.134715109 FDTGNLCMVTGGANLGR ddPTM_A459_MK2206_30min_R1 2 FDTGNLCMVTGGANLGR 17 0 P62701 P62701 RPS4X "40S ribosomal protein S4, X isoform" 0 ; 278.35 2.04E-61 24242800 2165.32 2219.29 2088.99 2094.17 2183.66 2393.31 2221 2082.46 2140.4 1749.32 FALSE TRUE 1981.148163 2074.813818 1947.195179 2255.463336 2096.680198 2528.817144 2072.841142 2064.253272 2362.902239 1966.038968 1.007685094 1.055326904 0.990415353 1.147211918 1.066448952 1.286249756 1.054323529 1.049955421 1.201859311 1 10.9410762 -5.762759447 24.99867933 1.119796851 1.021560889 0.235808813 0.079910579 49.67976379 940842.4099 0.021627102 0.034196961 1.73E-06 5.762759447 -0.098235962 FDWGPAPPTTFKPNS(ph)PDLAK ddPTM_A459_MK2206_30min_R1 2 FDWGPAPPTTFKPNSPDLAK 20 1 Q5VT82;B7ZM79;Q9HC56-2;Q9HC56 Q5VT82 PCDH9 Protocadherin-9 1 FDWGPAPPT(0.002)T(0.002)FKPNS(0.995)PDLAK;FDWGPAPPTTFKPNS(1)PDLAK 96.805 0.00053576 54471000 10639.9 11080.6 8963.3 10080.7 8876.8 8496.7 11245.4 11672.8 14969 14472.5 TRUE FALSE 9734.920633 10359.25093 8354.896169 10857.11726 8523.218259 8977.775811 10495.23988 11570.74594 16525.08112 16265.46256 0.598502538 0.63688634 0.513658689 0.667495143 0.524007124 0.551953305 0.645246936 0.711369006 1.015961339 1 13.98952423 -8.123909645 2.184950686 1.024365083 0.58706836 0.916622989 0.049518395 0.079946508 0.680529172 0.042742938 0.01325898 7.52E-09 8.123909645 -0.437296722 FDWGPAPPTTFKPNS(ph)PDLAK ddPTM_A459_MK2206_30min_R2 2 FDWGPAPPTTFKPNSPDLAK 20 1 Q5VT82;B7ZM79;Q9HC56-2;Q9HC56 Q5VT82 PCDH9 Protocadherin-9 1 FDWGPAPPT(0.009)T(0.008)FKPNS(0.984)PDLAK;FDWGPAPPT(0.063)T(0.063)FKPNS(0.873)PDLAK 52.019 0.034063 14656600 101334 64621 72025 61649 68565 60409 114189 65249 98801 103694 TRUE FALSE 109092.209 61412.01511 74426.27755 56612.07949 65872.79359 62707.90683 99195.84713 73777.26833 107394.5324 100310.4733 1.087545551 0.612219374 0.741959191 0.564368581 0.656689092 0.625138181 0.988888238 0.735489186 1.070621331 1 16.61411272 -7.841295468 1.194043006 1.013339764 0.709432278 0.310673698 0.161918876 0.574587383 1.478068121 0.138379673 0.051769101 1.44E-08 7.841295468 -0.303907486 FEDEDS(ph)DDVPR ddPTM_A459_MK2206_30min_R2 1 FEDEDSDDVPR 11 0 P49756 P49756 RBM25 RNA-binding protein 25 1 FEDEDS(1)DDVPR 174.72 5.59E-08 0 27588 21652 23964 23411 20608 20084 23345 17006 17684 32513 TRUE FALSE 29700.15849 20576.79316 24762.9478 21498.24641 19798.82637 20848.31069 20279.77346 19228.74259 19222.12235 31452.10347 0.944298003 0.654226296 0.78732247 0.683523327 0.629491328 0.662859027 0.64478274 0.61136587 0.611155383 1 14.94086889 -4.757492081 24.84960293 0.683547618 0.944298411 0.292368114 0.112727433 122.5263766 771229.4735 0.026046284 0.192041371 1.75E-05 4.757492081 0.260750793 FEDEDSDDVPR ddPTM_A459_MK2206_30min_R2 1 FEDEDSDDVPR 11 0 P49756 P49756 RBM25 RNA-binding protein 25 0 150.81 0.0084073 3734600 22788 19695 18305 22522 20090 17764 20262 20377 16298 22792 FALSE TRUE 24532.6668 18716.97494 18915.27956 20681.88056 19301.16566 18440.02147 17601.57506 23040.34386 17715.57058 22048.29891 1.112678439 0.848907892 0.857901993 0.938026133 0.875403846 0.836346674 0.79831896 1.044994172 0.803489224 1 14.42837973 -4.755649204 24.99654599 0.886286197 1.112678804 0.426876992 0.077591778 174.3184406 752467.4356 0.018284889 0.158731123 1.76E-05 4.755649204 0.226392607 FEDEGAGFEESS(ph)ETGDYEEK ddPTM_A459_MK2206_30min_R1 2 FEDEGAGFEESSETGDYEEK 20 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 FEDEGAGFEES(0.056)S(0.943)ET(0.001)GDYEEK;FEDEGAGFEES(0.159)S(0.841)ETGDYEEK 166.91 2.13E-09 15347300 4230.4 4902.7 4248 2023.96 2821.53 2896 6203.2 4050.8 8656.3 14652.1 TRUE FALSE 3870.582265 4583.533339 3959.657596 2179.84575 2709.142485 3059.969017 5789.395846 4015.384283 9556.153362 16467.31277 0.235046381 0.278341306 0.240455601 0.132374103 0.164516368 0.185820787 0.351568949 0.24383968 0.580310431 1 14.00731753 -8.596722001 1.372865405 1.002017729 0.215451777 0.945626268 0.058300806 0.111372806 0.452733468 0.058272082 0.017460676 2.53E-09 8.596722001 -0.786565952 down FEDEGAGFEESS(ph)ETGDYEEK ddPTM_A459_MK2206_30min_R2 1 FEDEGAGFEESSETGDYEEK 20 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 FEDEGAGFEES(0.092)S(0.798)ET(0.108)GDY(0.002)EEK 96.544 0.001754 0 41392 17914 27545 19835 18374 17277 26343 18127 16371 32203 TRUE FALSE 44561.00335 17024.41681 28463.33655 18214.41705 17652.54444 17934.48834 22884.13246 20496.26114 17794.91999 31152.21875 1.430427916 0.546491309 0.913685692 0.584690843 0.566654484 0.575705008 0.734590773 0.657939048 0.571224802 1 14.9270473 -4.755665215 24.99286943 0.6714441 1.43042914 0.690864812 0.149709745 99.1734018 429218.1583 0.034979821 0.304067199 1.76E-05 4.755665215 0.75898504 FEDENFILK ddPTM_A459_MK2206_30min_R1 2 FEDENFILK 9 0 P62937;F8WE65;C9J5S7;P62937-2 P62937 PPIA "Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase" 0 ; 195.05 0.011621 66097000 11191.1 9823.9 8717.2 8095.2 9509.3 9269 10317.5 9053.3 9002.3 11485.4 FALSE TRUE 10239.23818 9184.362324 8125.500752 8718.693707 9130.524445 9793.80277 9629.2384 8974.147953 9938.1213 12908.29806 0.793229141 0.711508386 0.62947886 0.67543325 0.70733759 0.758721461 0.745972734 0.695223174 0.769901753 1 13.65601118 -10.15713835 0.480024555 1.065368586 0.704191892 0.791348371 0.043628838 5.041030253 0.939698797 0.563691131 0.023992733 6.96E-11 10.15713835 -0.361176694 FEDENFILK ddPTM_A459_MK2206_30min_R2 3 FEDENFILK 9 0 P62937;F8WE65;C9J5S7;P62937-2 P62937 PPIA "Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase" 0 ;; 156.35 0.011444 45550600 165106 143378 147328 165915 148358 123221 160568 141443 109741 147662 FALSE TRUE 177746.6423 136258.057 152239.842 152359.2138 142532.7195 127910.2615 139485.2287 159930.0857 119286.0738 142843.801 1.244342709 0.953895486 1.06577843 1.06661411 0.997822226 0.89545546 0.976487798 1.119615164 0.835080507 1 17.1240789 -4.755579874 24.97489529 0.995438143 1.244343116 0.478003045 0.079533788 169.257678 721351.4641 0.0193755 0.169714728 1.76E-05 4.755579874 0.248904974 FEEESKEPVADEEEEDS(ph)DDDVEPITEFR ddPTM_A459_MK2206_30min_R1 3 FEEESKEPVADEEEEDSDDDVEPITEFR 28 1 E9PJF4;P54105 E9PJF4 CLNS1A Methylosome subunit pICln 1 FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR 156.56 1.93E-17 155681000 8556.3 8841.28 9208.29 8575.56 7463.54 7127.86 7527.13 7535.62 7534.77 7422.81 TRUE FALSE 7828.541754 8265.711065 8583.256931 9236.051117 7166.251397 7531.433273 7025.008892 7469.736869 8318.036305 8342.403742 0.938403606 0.990806885 1.028870958 1.107121089 0.859015173 0.902789353 0.842084501 0.895393834 0.997079087 1 13.02624742 -6.27644035 24.99172008 0.906467676 1.015377539 0.37890269 0.062144574 808.9524915 1347717.115 0.019655349 0.022369602 5.29E-07 6.27644035 0.108909862 FEELCSDLFR ddPTM_A459_MK2206_30min_R2 4 FEELCSDLFR 10 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;P17066;P48741 A0A0G2JIW1;P17066 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 ;;; 176.38 0.00093771 19865300 73814 75596 67553 77179 66484 72167.2 78437 54877.3 68157 65425.3 FALSE TRUE 79465.25659 71842.01257 69805.1833 70873.22882 63873.5041 74913.57337 68138.12768 62049.95153 74085.17266 63290.47782 1.255564175 1.135115661 1.102933422 1.119808718 1.009211912 1.183646829 1.076593668 0.98039948 1.170557961 1 15.94970084 -1.522879027 0.7519461 1.074587627 33.14373048 0.415097724 0.064346756 372.6890384 1.594711713 0.022996574 20250.29669 0.029999981 1.522879027 32.06914285 FEELNADLFR ddPTM_A459_MK2206_30min_R1 2 FEELNADLFR 10 0 P11142;E9PKE3;P11142-2;E9PN89;E9PNE6;A8K7Q2;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 201.61 0.0025765 58764000 5034.3 4658.1 4838.6 4205 4792 4434.9 5072.1 4476.9 4445.6 4957.1 FALSE TRUE 4606.106349 4354.856843 4510.169313 4528.869829 4601.124493 4686.000205 4733.749464 4437.758935 4907.736029 5571.222972 0.826767547 0.781669817 0.809547443 0.81290407 0.825873334 0.841107999 0.849678695 0.796550229 0.880908205 1 12.44377834 -14.52287875 0.200460426 1.818606195 0.794755202 0.870664406 0.02116411 44.9694711 0.443857548 14.69210413 0.049155055 3.00E-15 14.52287875 -1.023850992 FEELNADLFR ddPTM_A459_MK2206_30min_R2 4 FEELNADLFR 10 0 P11142;E9PKE3;P11142-2;E9PN89;E9PNE6;A8K7Q2;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ;;; 201.61 0.0025454 65984000 138076 142875 127616 141011 122208 128306 153951 109981 109866 137657 FALSE TRUE 148647.2047 135780.0353 131870.6537 129489.9502 117409.4999 133188.7747 133737.0488 124355.8943 119421.9461 133165.2634 1.11626111 1.01963554 0.990278173 0.972400361 0.881682632 1.000176558 1.004293803 0.933846344 0.896795028 1 17.02285827 -4.469689618 1.03715387 0.953788281 1.29771752 0.597120834 0.04034125 2.272224468 1.292268476 0.013352396 1.009130851 3.39E-05 4.469689618 0.34392924 FEEPAPLS(ph)YDSRPR ddPTM_A459_MK2206_30min_R2 1 FEEPAPLSYDSRPR 14 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 FEEPAPLS(0.997)YDS(0.003)RPR 88.133 0.011646 2704700 8403 8704.8 8865.8 8609.6 8280.5 8295.9 9956.3 7508.4 8661.5 9453.1 TRUE FALSE 9046.340141 8272.53229 9161.381347 7906.168139 7955.365964 8611.606288 8649.02585 8489.77366 9414.861614 9144.646121 0.989249887 0.90463121 1.001830057 0.864567971 0.86994793 0.941710174 0.945802138 0.928387337 1.029549038 1 13.15871163 -8.255488062 24.46853788 1.014774523 0.92889565 0.384244617 0.042485977 333.9224269 1372924.245 0.030781907 0.010929104 5.55E-09 8.255488062 -0.085878873 FEEPAPLSYDSRPR ddPTM_A459_MK2206_30min_R2 2 FEEPAPLSYDSRPR 14 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 0 ; 169.09 0.00051893 4954100 21857.7 33225 28266 36561 29518 31859 33137 25497 29597 28638 FALSE TRUE 23531.14232 31575.09481 29208.37433 33573.84935 28358.975 33071.41657 28786.0721 28829.54544 32171.29356 27703.54441 0.849391037 1.139749281 1.05431904 1.211897252 1.023658727 1.193761206 1.039075422 1.040644656 1.161269948 1 14.75778295 -4.755655903 24.99897344 1.098640096 0.849390636 0.513986709 0.071913518 143.3651176 619630.5731 0.016496804 0.143517824 1.76E-05 4.755655903 -0.249249459 FEEVEEEPEVIPGPPS(ph)ESPGMLTK ddPTM_A459_MK2206_30min_R2 1 FEEVEEEPEVIPGPPSESPGMLTK 24 0 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 FEEVEEEPEVIPGPPS(0.493)ES(0.493)PGMLT(0.015)K 67.11 0.013359 0 2844 3009.9 1108.5 3892.1 2898.9 2983.3 3915.3 2666.9 2981.5 3527.5 TRUE FALSE 3061.738827 2860.432743 1145.456837 3574.10298 2785.07462 3096.831572 3401.216407 3015.472987 3240.825481 3412.397964 0.897239671 0.838247113 0.335675044 1.047387502 0.816163487 0.907523567 0.996723255 0.88368151 0.949720846 1 11.73657019 FEEVEEEPEVIPGPPSES(ph)PGMLTK ddPTM_A459_MK2206_30min_R1 1 FEEVEEEPEVIPGPPSESPGMLTK 24 0 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 FEEVEEEPEVIPGPPS(0.006)ES(0.98)PGMLT(0.014)K 152.52 3.86E-10 3511900 2269.6 1919.3 1314.3 1585.2 1817.5 1743.8 1302.2 1449 1212.4 991.54 TRUE FALSE 2076.558602 1794.353221 1225.088978 1707.292379 1745.105126 1842.532449 1215.332614 1436.331546 1338.433319 1114.379461 1.86342146 1.610181526 1.099346336 1.532056574 1.565988236 1.653415657 1.090591362 1.288907052 1.20105706 1 10.12202486 -1.522878747 0.085237368 0.655783069 3.457696964 0.492336597 0.197106418 168.3516218 1.042763601 4.801289668 55.28956368 0.03 1.522878747 2.801913895 FEGGDRDLEHLSK ddPTM_A459_MK2206_30min_R1 2 FEGGDRDLEHLSK 13 1 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 ; 83.137 0.025195 14033700 15129.3 6589.9 9797.8 5479.4 19998.7 19907.4 18258.7 12675.5 7556.5 6349.8 FALSE TRUE 13842.47359 6160.896312 9132.752634 5901.424337 19202.10943 21034.53978 17040.69544 12564.67944 8342.025216 7136.461163 1.939683167 0.863298513 1.279731288 0.82693988 2.690704678 2.947474849 2.387835518 1.760631657 1.168930234 1 12.80099313 -6.252869282 24.81378577 2.098133649 1.205142026 0.243820287 0.643791956 762.238498 2206977.536 0.199069564 0.252832428 5.59E-07 6.252869282 -0.892991623 FEGLS(ph)PLQR ddPTM_A459_MK2206_30min_R1 2 FEGLSPLQR 9 0 Q9Y3E2 Q9Y3E2 BOLA1 BolA-like protein 1 1 FEGLS(1)PLQR;FEGLS(1)PLQR 91.658 0.026926 8568500 6438.3 6427.6 6733.9 5886.5 6810.5 6463 7780.5 6358.3 6194.9 5582.2 TRUE FALSE 5890.688776 6009.162072 6276.82163 6339.87925 6539.223364 6828.929475 7261.477041 6302.710053 6838.882024 6273.765079 0.938939967 0.95782389 1.000487196 1.010538197 1.042312436 1.088489828 1.15743528 1.004613653 1.090076204 1 12.61511579 -5.786494814 1.11267903 1.072199189 0.942316509 0.529555184 0.043221123 0.431948501 1.041103497 0.016234497 0.043757337 1.63E-06 5.786494814 -0.12988268 FEGLS(ph)PLQR ddPTM_A459_MK2206_30min_R2 1 FEGLSPLQR 9 0 Q9Y3E2 Q9Y3E2 BOLA1 BolA-like protein 1 1 FEGLS(1)PLQR 82.494 0.041196 5013600 22513 23740 23047 27139 25968 25012 28737 21447 20080 24119 TRUE FALSE 24236.61259 22561.10612 23815.37548 24921.65689 24948.36584 25963.84919 24963.79738 24250.19654 21826.5221 23331.99901 1.038771371 0.966959844 1.020717319 1.068132091 1.069276826 1.11280003 1.069938216 1.039353573 0.935475872 1 14.5100223 -4.280087625 18.96373475 1.036291548 100.7077277 0 0.050623305 11396.37263 890331.6313 0.013096501 10528.69351 5.25E-05 4.280087625 99.67143615 FEHCNFNDVTTR ddPTM_A459_MK2206_30min_R1 1 FEHCNFNDVTTR 12 0 E9PNW4;A0A2U3TZL5;P13987;P13987-2 E9PNW4 CD59 CD59 glycoprotein 0 85.672 0.043468 3991300 2151.6 2015.2 2142.9 1824 2335 2055.5 2565.3 2512.3 2099.7 1900.3 FALSE TRUE 1968.595121 1884.010114 1997.445918 1964.484796 2241.992006 2171.880634 2394.173518 2490.335226 2317.971329 2135.723511 0.921746243 0.882141394 0.935254919 0.919821684 1.049757609 1.016929684 1.121012859 1.166038213 1.085333058 1 11.06050917 -6.450795369 1.242115305 1.10189217 0.903109169 0.734679931 0.046623864 0.211814371 0.677812366 0.019814766 0.023894793 3.54E-07 6.450795369 -0.198783001 FEPES(ph)PGFESR ddPTM_A459_MK2206_30min_R1 3 FEPESPGFESR 11 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 FEPES(1)PGFESR;FEPES(0.999)PGFES(0.001)R;FEPES(0.999)PGFES(0.001)R 203.88 1.79E-05 83095000 11121.6 11154.2 10587.8 9452.2 12807.1 12401.1 10975.7 10043.1 9283.7 7912.5 TRUE FALSE 10175.64952 10428.05955 9869.129635 10180.21008 12296.96609 13103.23957 10243.53108 9955.294236 10248.77384 8892.760236 1.144262214 1.172645981 1.109793739 1.144775054 1.382806436 1.473472715 1.151895565 1.119483037 1.152485119 1 13.11841557 -8.390564099 1.242977913 1.012958827 1.227839817 0.262515156 0.112659428 0.686583359 2.254015998 0.120504943 0.037874093 4.07E-09 8.390564099 0.21488099 FEPES(ph)PGFESR ddPTM_A459_MK2206_30min_R2 2 FEPESPGFESR 11 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 FEPES(1)PGFESR;FEPES(0.998)PGFES(0.002)R 166.11 0.00061395 75330000 85734 93859 86043 102225 87338 93101 96883 71416 69007 80367 TRUE FALSE 92297.86096 89198.09854 88911.63068 93872.8905 83908.67128 96644.02379 84162.14572 80750.31641 75009.10412 77744.63137 1.187192727 1.147321647 1.143636919 1.207451741 1.079285731 1.243095788 1.082546077 1.038660998 0.96481394 1 16.24645543 -7.683892913 2.321077563 0.990202649 1.163805965 0.743611073 0.044042473 0.143866748 1.55003926 0.02576873 0.011893796 2.07E-08 7.683892913 0.173603316 FEPLDSACSS(ph)R ddPTM_A459_MK2206_30min_R1 2 FEPLDSACSSR 11 0 Q9UPZ3;Q9UPZ3-2;G3V159 Q9UPZ3 HPS5 Hermansky-Pudlak syndrome 5 protein 1 FEPLDSACS(0.003)S(0.997)R;FEPLDSACS(0.031)S(0.969)R 147.62 0.00066322 11346400 5358.4 5545.4 5304.1 4182.6 5817.3 4604.6 5424.1 5417.4 4854.7 4083.3 TRUE FALSE 4902.639942 5184.393452 4944.07247 4504.744577 5585.584623 4865.308473 5062.268186 5370.036243 5359.363438 4589.170031 1.068306449 1.129701758 1.077334777 0.981603328 1.217123049 1.060171761 1.103090134 1.170154125 1.167828475 1 12.16401755 -6.258598789 24.99891878 1.12442593 1.069848255 0.139313464 0.066378665 538.0657106 4735317.872 0.019582459 0.024269181 5.51E-07 6.258598789 -0.054577675 FEPLDSACSS(ph)R ddPTM_A459_MK2206_30min_R2 2 FEPLDSACSSR 11 0 Q9UPZ3;Q9UPZ3-2;G3V159 Q9UPZ3 HPS5 Hermansky-Pudlak syndrome 5 protein 1 FEPLDSACS(0.028)S(0.972)R;FEPLDS(0.003)ACS(0.457)S(0.54)R 116.74 0.0058015 8979200 49105 60698 55582 67590 61059 65156 62016 52095 57858 52428 TRUE FALSE 52864.51656 57683.82558 57435.07614 62067.68079 58661.51686 67635.55724 53873.22471 58903.99537 62890.38426 50717.27865 1.042337404 1.137360425 1.132455795 1.223797539 1.156637707 1.333580173 1.06222625 1.161418691 1.240018903 1 15.63018972 -4.574093286 1.372985818 1.175173046 0.932241726 0.140908088 0.087773513 3.664082462 4.346098331 0.024224661 1.415369454 2.67E-05 4.574093286 -0.242931319 FERNNT(ph)DT(ph)FNFPDMLSLGHLCK ddPTM_A459_MK2206_30min_R2 1 FERNNTDTFNFPDMLSLGHLCK 22 1 J3QKX9;J3KRE7;F5GZB4;A0A2R8Y7K4;Q8IVV2-4;Q8IVV2-5;Q8IVV2-3;Q8IVV2 J3QKX9 LOXHD1 Lipoxygenase homology domain-containing protein 1 2 FERNNT(1)DT(1)FNFPDMLS(0.001)LGHLCK 58.49 0.035349 22755000 3879.9 21935 16842 43946 30675 106030 11490 27615 53012 8329.9 TRUE FALSE 4176.948127 20845.7398 17403.50387 40355.47122 29470.54537 110065.0459 9981.349198 31224.37532 57622.88794 8058.096045 0.518354225 2.586931166 2.15975384 5.008065304 3.657259135 13.65893945 1.238673397 3.874907316 7.150930892 1 12.97622329 -5.727972437 1.957635631 5.446291341 1.503667595 0.16464717 3.400556498 0.590908725 4.60825486 1.03723272 2.139846474 1.87E-06 5.727972437 -3.942623746 FERPDGSHFDVR ddPTM_A459_MK2206_30min_R1 1 FERPDGSHFDVR 12 1 B4DEM9;Q9Y2S7 B4DEM9 POLDIP2 Polymerase delta-interacting protein 2 0 103.46 0.0085008 4279100 2397.6 2540.6 2564.5 2123.2 2803.2 2269.3 2353.8 2553.5 2080.1 2192 FALSE TRUE 2193.67153 2375.206478 2390.428885 2286.729232 2691.542608 2397.785805 2196.782297 2531.175019 2296.333839 2463.561509 0.890447233 0.964135245 0.970314269 0.92822088 1.092541265 0.973300564 0.891709945 1.027445432 0.932119547 1 11.26652978 -3.693319252 1.210629071 0.978556307 2.17E-05 0.191577861 0.053049419 30.74604427 4.830632759 0.015676284 68.61973619 0.000202619 3.693319252 -0.978534607 FES(ph)PEVAER ddPTM_A459_MK2206_30min_R1 2 FESPEVAER 9 0 A0A087X0X3;P52272-2;P52272 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 FES(1)PEVAER;FES(1)PEVAER 115.57 0.0081236 11490800 6973.3 7053 7890.9 5967.2 6382.2 6013.9 7912.9 5883.4 7255.7 7452.4 TRUE FALSE 6380.184217 6593.848418 7355.287693 6426.794778 6127.983459 6354.401821 7385.044879 5831.962054 8009.95598 8375.659575 0.761753049 0.787263183 0.878174146 0.767318051 0.731641897 0.758674796 0.881726963 0.696298841 0.956337338 1 13.03198709 -8.401934412 5.496409188 0.997621864 0.786859844 0.667762304 0.055363036 0.126285391 4.7818809 0.052442304 0.013628436 3.96E-09 8.401934412 -0.210762021 FES(ph)PEVAER ddPTM_A459_MK2206_30min_R2 4 FESPEVAER 9 0 A0A087X0X3;P52272-2;P52272 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 FES(1)PEVAER;FES(1)PEVAER;FES(1)PEVAER;FES(1)PEVAER 131.82 0.0035118 20933200 124893 133665 122742 128745 128702 116316 125798 120692 109976 127375 TRUE FALSE 134454.9041 127027.3905 126834.157 118226.1217 123648.5128 120742.4869 109280.5715 136466.8588 119541.5137 123218.7642 1.091188546 1.030909467 1.029341252 0.959481475 1.003487688 0.979903407 0.886882548 1.10751686 0.970156733 1 16.91086245 -4.809751274 1.199038652 0.988214701 1.132191555 0.26977894 0.052041459 2.031006027 2.562912839 0.015857729 0.362955439 1.55E-05 4.809751274 0.143976854 FESLEPEMNNQASR ddPTM_A459_MK2206_30min_R1 2 FESLEPEMNNQASR 14 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 0 ; 248.98 3.20E-25 18020500 4649.6 5039.7 4355.2 4303.7 6032.6 4948.9 5327.5 4865 4332.3 4514.8 FALSE TRUE 4254.127104 4711.614614 4059.581158 4635.17172 5792.308768 5229.102441 4972.112196 4822.465818 4782.658088 5074.127509 0.838395783 0.928556605 0.800055015 0.913491376 1.141537882 1.030542183 0.979895004 0.950402963 0.942557726 1 12.30894406 -6.010365451 24.87107411 1.006848945 0.861927083 0.572376642 0.059679796 368.1925787 883452.4105 0.018128712 0.025120672 9.76E-07 6.010365451 -0.144921862 FESPATGILS(ph)PR ddPTM_A459_MK2206_30min_R1 4 FESPATGILSPR 12 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 FESPATGILS(1)PR;FESPATGILS(1)PR;FESPATGILS(1)PR;FESPATGILS(1)PR 211.38 4.98E-06 223211000 10693.8 10650.6 10660.4 8451 9144.6 8184.9 8879.3 7178.9 6653.9 6623.9 TRUE FALSE 9784.236155 9957.244004 9936.80175 9101.897484 8780.351218 8648.321965 8286.978098 7116.135634 7345.596716 7444.51874 1.314287262 1.337526891 1.334780944 1.222630744 1.179438393 1.161703297 1.113165053 0.955889277 0.9867121 1 12.86196287 -6.857311331 0.655758191 0.963225042 1.344264544 0.933897081 0.035406967 0.183468915 0.170638496 0.029932855 0.02893124 1.39E-07 6.857311331 0.381039502 FESPATGILS(ph)PR ddPTM_A459_MK2206_30min_R2 3 FESPATGILSPR 12 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 FESPATGILS(1)PR;FESPATGILS(1)PR;FESPATGILS(1)PR 105.66 0.0092291 110948400 39519 38489.6 38295.2 36967.6 36184.1 37088.4 41425.5 24493 29836.2 33874.5 TRUE FALSE 42544.60502 36578.26243 39571.94285 33947.22883 34763.33042 38499.82505 35986.28209 27694.3192 32431.29874 32769.17784 1.29831164 1.116239858 1.207596451 1.035949971 1.06085452 1.174879188 1.098174701 0.845133172 0.989689119 1 15.00005186 -3.243504133 0.238124673 0.944456824 1.852932365 0.53405513 0.082631446 19.05179999 0.512348192 0.127412946 5.765998646 0.000570816 3.243504133 0.908475541 FFDANYDGKDYDPVAAR ddPTM_A459_MK2206_30min_R2 1 FFDANYDGKDYDPVAAR 17 1 Q15691 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 0 89.992 0.02404 0 13852 26110 22640 21077 27964 20670 22157 19492 20092 18576 FALSE TRUE 14912.51977 24813.41537 23394.8063 19354.94168 26865.99285 21456.61133 19247.75928 22039.67133 21839.56584 17969.86664 0.829862573 1.380834697 1.301890925 1.077077647 1.495057998 1.194032864 1.071113084 1.226479404 1.215343791 1 14.13329208 -10.63147341 7.872885584 0.99999998 1.209457811 0.103424068 0.17343587 5.87E-08 6.40E-09 0.161084875 0.039068817 2.34E-11 10.63147341 0.209457831 FFEHFIEGGR ddPTM_A459_MK2206_30min_R1 1 FFEHFIEGGR 10 0 J3KR44;F5H6Q1;F5GYJ8;Q96FW1;F5GYN4;F5H3F0;Q96FW1-2 J3KR44 OTUB1 Ubiquitin thioesterase OTUB1 0 110.54 0.013202 7241500 5431.5 5365.1 5011.2 4659.6 5631.6 5120.1 5156.8 4154.7 4224.3 4163.2 FALSE TRUE 4969.522403 5015.831015 4671.053706 5018.483199 5407.281447 5409.995637 4812.799281 4118.375896 4663.431102 4678.968647 1.062097821 1.071995004 0.998308401 1.072561835 1.155656696 1.156236779 1.028602593 0.880188821 0.99667928 1 12.19197485 -7.528272477 22.94514946 0.953939456 1.084747127 0.538561381 0.052746661 42.54736889 180987.0445 0.026377565 0.015312545 2.96E-08 7.528272477 0.130807671 FFMT(ph)PPR ddPTM_A459_MK2206_30min_R2 1 FFMTPPR 7 0 H0Y322;Q5TKA1;Q5TKA1-2;C9J5J4;H7C4T7;Q5TKA1-3 H0Y322 LIN9 Protein lin-9 homolog 1 FFMT(1)PPR 111.17 0.035325 7414400 39218 49310 42255 48671 47606 48913 49588 38458 41425 45472 TRUE FALSE 42220.56023 46861.3371 43663.76061 44694.42361 45736.74924 50774.41849 43077.03603 43484.59265 45028.07162 43988.25236 0.95981445 1.065314819 0.992623218 1.016053633 1.039749178 1.154272238 0.979285007 0.988550131 1.023638567 1 15.42483066 -1.536444288 18.67887334 1.024826443 0.005128699 0 0.052883396 0 0 0.012208221 0 0.029077409 1.536444288 -1.019697744 FFPNDDPEAVS(ph)SPR ddPTM_A459_MK2206_30min_R1 2 FFPNDDPEAVSSPR 14 0 F5H7T0;F6RJM5;Q96S38-2;Q96S38;A0A087X1U5 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 FFPNDDPEAVS(0.912)S(0.088)PR;FFPNDDPEAVS(0.894)S(0.106)PR 167.92 0.0002057 6449600 3880.7 2996.8 3307.3 2165.58 2967.5 2632.1 2668.2 2599.1 2363.59 2389.41 TRUE FALSE 3550.626087 2801.707775 3082.809691 2332.373347 2849.298191 2781.127227 2490.209246 2576.376343 2609.293639 2685.42815 1.322182493 1.043300218 1.147976977 0.868529418 1.061021942 1.035636432 0.927304365 0.959391277 0.971649023 1 11.39093641 -1.52287884 0.800733329 0.979160125 84.02640226 0.668125587 0.069664172 286.7979243 0.995786597 0.023905693 43207.12185 0.029999993 1.52287884 83.04724214 FFPNDDPEAVS(ph)SPR ddPTM_A459_MK2206_30min_R2 2 FFPNDDPEAVSSPR 14 0 F5H7T0;F6RJM5;Q96S38-2;Q96S38;A0A087X1U5 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 FFPNDDPEAVS(0.996)S(0.004)PR;FFPNDDPEAVS(0.959)S(0.041)PR 172.09 0.00012899 1871700 28624 31649 25517 30253 25846 27181 23610 24044 20589.9 23490 TRUE FALSE 30815.47545 30077.35668 26367.72404 27781.23313 24831.15617 28215.392 20509.97864 27186.63336 22380.77228 22723.52322 1.356104647 1.323622063 1.160371294 1.222575956 1.092751152 1.241682098 0.902587967 1.196409249 0.98491647 1 14.47189892 -1.522878786 0.224121981 0.990342545 3.104556424 0.60029606 0.090025468 33.33720891 0.430513114 0.127808265 25.6415142 0.029999997 1.522878786 2.114213878 FFQGS(ph)QEFLASASASAER ddPTM_A459_MK2206_30min_R1 2 FFQGSQEFLASASASAER 18 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 FFQGS(0.683)QEFLAS(0.311)AS(0.006)ASAER;FFQGS(0.996)QEFLAS(0.004)ASASAER 239.13 5.85E-25 9829300 1421.78 1173.9 1060.94 656.933 1552.92 1282.89 1739.64 1476.45 993.51 1116.76 TRUE FALSE 1300.850145 1097.478897 988.9263487 707.5300935 1491.063908 1355.526123 1623.59179 1463.541553 1096.78892 1255.11266 1.03644094 0.874406682 0.787918392 0.563718394 1.187992087 1.080003546 1.293582514 1.166063892 0.873856949 1 10.29360115 -6.286215919 24.98791785 1.117207363 0.817841268 0.456612143 0.151428559 691.3416948 697237.7639 0.048448193 0.054958794 5.17E-07 6.286215919 -0.299366095 FFQGS(ph)QEFLASASASAER ddPTM_A459_MK2206_30min_R2 1 FFQGSQEFLASASASAER 18 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 FFQGS(0.996)QEFLAS(0.004)ASASAER 164.94 1.04E-06 6094400 16665 16093 13016 14033 13011 13238 14646 12039 10286 14867 TRUE FALSE 17940.88521 15293.84502 13449.94694 12886.45901 12500.12276 13741.78137 12722.96261 13612.53864 11180.65769 14381.89101 1.247463578 1.063409882 0.935200172 0.896019793 0.869157106 0.95549197 0.88465158 0.946505479 0.777412211 1 13.81196576 -4.842929323 1.539658235 0.901064542 1.355059759 0.784906224 0.056239572 0.394048493 0.972626143 0.015011046 0.264460531 1.44E-05 4.842929323 0.453995217 FFQGSQEFLAS(ph)ASASAER ddPTM_A459_MK2206_30min_R1 1 FFQGSQEFLASASASAER 18 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 FFQGS(0.029)QEFLAS(0.97)AS(0.001)ASAER 206.81 1.90E-11 7700900 1601.4 1290.9 1516.6 1148.1 1375.7 1131 1377.3 1460.9 1247.2 1223 TRUE FALSE 1465.192521 1206.862175 1413.657417 1236.526861 1320.902956 1195.036243 1285.42283 1448.127505 1376.850903 1374.514473 1.065970966 0.878027987 1.028477652 0.899609924 0.960996033 0.86942427 0.93518319 1.053555662 1.001699822 1 10.42470638 -7.750259083 24.99941085 1.020720808 0.944215603 0.220416729 0.06010085 278.1304514 621909.9706 0.027064788 0.015434089 1.78E-08 7.750259083 -0.076505205 FFSRSRKTSGLSSSPS(ph)T(ph)PT(ph)QVT(ph)K ddPTM_A459_MK2206_30min_R1 1 FFSRSRKTSGLSSSPSTPTQVTK 23 3 A0A494C0H7;A0A494C094;F8WDA1;A0A494C188;A0A494C155;A0A494C1K7;Q9UGJ0-3;Q9UGJ0 A0A494C0H7 PRKAG2 5-AMP-activated protein kinase subunit gamma-2 4 FFS(0.014)RS(0.209)RKT(0.045)S(0.045)GLS(0.041)S(0.198)S(0.347)PS(0.677)T(0.816)PT(0.804)QVT(0.804)K 46.356 0.031779 3790700 613.52 491.14 800.69 447.22 616.47 803.69 762.1 625.01 608.13 561.37 TRUE FALSE 561.3369023 459.1666967 746.3413937 481.6649619 591.9146945 849.1942333 711.2616995 619.5456035 671.3472897 630.9167537 0.889716272 0.727776991 1.182947495 0.763436633 0.938181925 1.345968748 1.12734635 0.981976782 1.064082204 1 9.301305851 -6.546312509 24.99773497 1.108422068 0.893998384 0.328736926 0.146520367 275.2173578 293583.31 0.048329303 0.04833157 2.84E-07 6.546312509 -0.214423684 FFTFDSPAELPS(ph)RTPR ddPTM_A459_MK2206_30min_R2 1 FFTFDSPAELPSRTPR 16 1 Q9NXH8 Q9NXH8 TOR4A Torsin-4A 1 FFTFDSPAELPS(0.637)RT(0.363)PR 95.554 0.0047477 3651900 23104 24858 18460 23049 23565 25677 23043 17381 23316 19639 TRUE FALSE 24872.86 23623.58787 19075.44719 21165.82297 22639.7197 26654.15623 20017.42642 19652.75638 25343.98353 18998.18104 1.309223233 1.243465773 1.004067029 1.114097341 1.19167828 1.402984642 1.05364963 1.034454632 1.334021583 1 14.21357368 -11.54825602 2.940059421 0.786730124 1.179627169 0.157087672 0.129152181 102401655.2 372718306.3 152487095.8 0.033033194 2.83E-12 11.54825602 0.392897045 FFTSS(ph)TSLTLK ddPTM_A459_MK2206_30min_R2 2 FFTSSTSLTLK 11 0 Q99567;J3KMX1;I3L245 Q99567 NUP88 Nuclear pore complex protein Nup88 1 FFTS(0.001)S(0.506)T(0.246)S(0.246)LT(0.001)LK;FFTS(0.004)S(0.982)T(0.007)S(0.007)LTLK 175.74 7.43E-05 5275600 43266 48307 38305 54197 42175 41228 46353 34781 44474 47393 TRUE FALSE 46578.47823 45908.14462 39582.06958 49768.93173 40518.99759 42796.96043 40266.79542 39326.99612 48342.26813 45846.57029 1.01596429 1.001343052 0.863359447 1.085554087 0.883795611 0.933482268 0.878294607 0.857795815 1.054435868 1 15.48452619 FFTT(ph)PSK ddPTM_A459_MK2206_30min_R1 2 FFTTPSK 7 0 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 FFT(0.042)T(0.949)PS(0.009)K;FFT(0.038)T(0.962)PSK 138.06 0.0068613 504300000 40954 39321 35263 32239 31262 28721 31647 30793 28925 25800 TRUE FALSE 37470.64724 36761.19575 32869.44581 34722.05337 30016.76834 30347.1582 29535.88637 30523.78005 31931.85726 28996.29878 1.292256213 1.267789246 1.133573842 1.197465015 1.035193097 1.046587305 1.018608844 1.052678491 1.101239075 1 14.82358114 -5.520143992 0.813933238 1.038857243 1.331419077 0.835470504 0.040470194 0.412728819 0.414087585 0.017493071 0.090717766 3.02E-06 5.520143992 0.292561834 FFTT(ph)PSK ddPTM_A459_MK2206_30min_R2 2 FFTTPSK 7 0 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 FFT(0.039)T(0.961)PSK;FFT(0.003)T(0.968)PS(0.029)K 131.62 0.0090662 432630000 395780 405890 353870 375470 410920 331020 490100 354270 335130 345500 TRUE FALSE 426081.2211 385734.0928 365667.8492 344792.8999 394785.2161 343617.1981 425749.2813 400574.3054 364279.0016 334226.3633 1.274828284 1.154110313 1.094072429 1.031614911 1.181191131 1.028097229 1.273835125 1.198511995 1.089917019 1 18.35046601 -4.788148485 3.368203859 1.121652509 1.293670093 0.260295289 0.081298372 0.449317906 8.174818259 0.020632132 0.199863345 1.63E-05 4.788148485 0.172017584 FFVS(ph)TPSQPSCK ddPTM_A459_MK2206_30min_R2 2 FFVSTPSQPSCK 12 0 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 FFVS(0.662)T(0.168)PS(0.168)QPS(0.001)CK;FFVS(0.966)T(0.014)PS(0.02)QPS(0.001)CK 134.61 0.0015748 9018400 74631 47112 51539 55616 43994 64129 84192 37019 63477 58866 TRUE FALSE 80344.80674 44772.48659 53257.28454 51071.99489 42266.57451 66569.47403 73137.48927 41857.51041 68998.11472 56945.20724 1.410914292 0.786238013 0.935237347 0.896862043 0.742232342 1.16900925 1.284348461 0.735048873 1.211657979 1 15.7972868 -6.797744086 24.99910979 1.076224368 0.940709813 0.074457311 0.218809896 476.0941103 327831.1408 0.075795854 0.066847703 1.59E-07 6.797744086 -0.135514555 FGDES(ph)PLLTMR ddPTM_A459_MK2206_30min_R1 1 FGDESPLLTMR 11 0 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 FGDES(1)PLLTMR 104.94 0.011983 3740300 1463.5 1695.8 1399.7 1243 1453.2 1276.4 1648.8 1716.4 1851.9 1410.7 TRUE FALSE 1339.02164 1585.403112 1304.692264 1338.736075 1395.315967 1348.668665 1538.81156 1701.393696 2044.411632 1585.468166 0.844559146 0.999958968 0.822906629 0.844379032 0.880065583 0.8506438 0.970572348 1.073117538 1.289468736 1 10.6306932 -7.708454734 2.426101026 1.151106264 0.877367717 0.652299321 0.080943195 0.16676139 1.965676776 0.048538262 0.022191238 1.96E-08 7.708454734 -0.273738547 FGDFLQHS(ph)PSILQSK ddPTM_A459_MK2206_30min_R1 1 FGDFLQHSPSILQSK 15 0 Q96Q89-5;Q96Q89-3;Q96Q89;Q96Q89-2 Q96Q89-5 KIF20B Kinesin-like protein KIF20B 1 FGDFLQHS(0.5)PS(0.5)ILQSK 103.73 0.0036151 17819000 6289.2 5341.6 5813.6 4593.7 6112.4 6185.1 6059.9 5232.5 4008.4 4122.6 TRUE FALSE 5754.270514 4993.860869 5418.98903 4947.50757 5868.930165 6535.295017 5655.655128 5186.752804 4425.087524 4633.338812 1.241927419 1.077810424 1.169564595 1.067806127 1.266674077 1.41049366 1.220643548 1.119441728 0.955053732 1 12.17783647 -8.071514026 3.293769032 0.979457901 1.205217469 0.493174574 0.092442934 0.244886957 4.958865493 0.079412625 0.027345981 8.48E-09 8.071514026 0.225759567 FGDFLQHS(ph)PSILQSK ddPTM_A459_MK2206_30min_R2 1 FGDFLQHSPSILQSK 15 0 Q96Q89-5;Q96Q89-3;Q96Q89;Q96Q89-2 Q96Q89-5 KIF20B Kinesin-like protein KIF20B 1 FGDFLQHS(0.998)PS(0.002)ILQSK 100.46 0.0050127 11006000 57441 76791 67348 69652 84261 69418 73176 53444 69085 70294 TRUE FALSE 61838.72712 72977.6706 69593.34871 63961.20879 80952.48976 72059.75063 63567.9033 60429.3143 75093.88842 68000.31254 0.909388866 1.073196106 1.023426895 0.940601689 1.190472319 1.059697345 0.934817811 0.888662302 1.104316813 1 16.05325376 -9.96947679 7.987531711 0.999999096 1.014253379 0.002047912 0.091264645 0 0 0.089461039 0.021697489 1.07E-10 9.96947679 0.014254283 FGDFLQHSPS(ph)ILQSK ddPTM_A459_MK2206_30min_R1 1 FGDFLQHSPSILQSK 15 0 Q96Q89-5;Q96Q89-3;Q96Q89;Q96Q89-2 Q96Q89-5 KIF20B Kinesin-like protein KIF20B 1 FGDFLQHS(0.16)PS(0.838)ILQS(0.002)K 78.508 0.021728 19064000 6054.5 5660.1 5840.8 5091.3 6249 5978.6 5695.6 5781 4778.1 4540.7 TRUE FALSE 5539.532982 5291.626461 5444.342769 5483.432808 6000.089098 6317.103165 5315.656916 5730.457326 5274.800594 5103.236197 1.085494139 1.036915843 1.066841228 1.074501081 1.175741993 1.237862196 1.041624709 1.122906545 1.033618745 1 12.3171967 -6.020682165 23.94699713 1.113086325 1.062167625 0.051954728 0.067085904 1046.9019 1212163.914 0.020093659 0.026275888 9.53E-07 6.020682165 -0.050918699 FGDFLQHSPS(ph)ILQSK ddPTM_A459_MK2206_30min_R2 1 FGDFLQHSPSILQSK 15 0 Q96Q89-5;Q96Q89-3;Q96Q89;Q96Q89-2 Q96Q89-5 KIF20B Kinesin-like protein KIF20B 1 FGDFLQHS(0.289)PS(0.711)ILQSK 99.413 0.0054582 11556000 31993 45593 40307 50076 49644 41738 50653 38016 36715 45233 TRUE FALSE 34442.40868 43328.91792 41650.81526 45984.63061 47694.72712 43326.36884 44002.20025 42984.82173 39908.40433 43757.05091 0.787128199 0.99021568 0.951865228 1.050907903 1.089989524 0.990157425 1.005602511 0.982351891 0.91204511 1 15.41722789 -4.436494616 1.903437215 1.003041543 0.468272633 0.641425132 0.046709288 1.847860935 2.988822245 0.013337484 2.420667922 3.66E-05 4.436494616 -0.53476891 FGESEEVEMEVES(ph)DEEDDKQEK ddPTM_A459_MK2206_30min_R1 13 FGESEEVEMEVESDEEDDKQEK 22 1 Q15459;Q15459-2;H7C1L2 Q15459 SF3A1 Splicing factor 3A subunit 1 1 FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGES(0.012)EEVEMEVES(0.988)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK 141.69 3.47E-06 374912200 28925.26 40665.37 40148.39 33084.36 18507.92 17514.28 25012.78 27028.64 38785.95 35130.34 TRUE FALSE 26465.01474 38018.04702 37423.22915 35632.52314 17770.71036 18505.9234 23344.22308 26792.33145 42817.8883 39482.55174 0.670296462 0.962907546 0.947842211 0.902487848 0.450090219 0.468711433 0.591254163 0.678586623 1.084476216 1 15.26892761 -6.152089371 23.4128952 0.677699138 0.882960224 0.10955525 0.207005144 29.79950012 6351.923106 0.062837419 0.081122764 7.05E-07 6.152089371 0.205261086 FGESEEVEMEVES(ph)DEEDDKQEK ddPTM_A459_MK2206_30min_R2 7 FGESEEVEMEVESDEEDDKQEK 22 1 Q15459;Q15459-2;H7C1L2 Q15459 SF3A1 Splicing factor 3A subunit 1 1 FGES(0.006)EEVEMEVES(0.994)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGES(0.002)EEVEMEVES(0.998)DEEDDKQEK;FGES(0.029)EEVEMEVES(0.971)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGES(0.011)EEVEMEVES(0.989)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK 95.365 0.00011915 108603600 210241.1 196390 207711.4 143684.3 163185.7 98002.6 214276.1 165712.3 124539.7 226353.1 TRUE FALSE 226337.3203 186637.5582 214636.3944 131944.8331 156778.2095 101732.1576 186141.3907 187371.4666 135371.938 218967.2169 1.033658479 0.852353886 0.980221594 0.602578025 0.715989415 0.464599948 0.850087942 0.855705567 0.618229249 1 17.74035536 -5.748826272 24.98246306 0.716998051 0.945105646 0.323168021 0.148752655 264.9384357 524752.2332 0.039741922 0.068241582 1.78E-06 5.748826272 0.228107594 FGESTTGFNFS(ph)FK ddPTM_A459_MK2206_30min_R1 1 FGESTTGFNFSFK 13 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 FGESTTGFNFS(1)FK 104.55 0.0076041 7308600 1860.8 2291.7 1816.6 1868.2 1716 1363.5 1441.4 1536.1 1538.9 1644.3 TRUE FALSE 1702.529189 2142.509913 1693.294253 2012.089088 1647.648086 1440.700192 1345.246836 1522.67004 1698.874162 1848.008298 0.921277892 1.159361631 0.916280655 1.088787908 0.891580459 0.77959617 0.727944153 0.823951949 0.919300072 1 10.85175552 -6.444895788 4.885172416 0.83157104 1.022657099 0.40510742 0.097180454 0.195960095 8.400635617 0.029807469 0.033463893 3.59E-07 6.444895788 0.19108606 FGEYNSNMS(ph)PEEK ddPTM_A459_MK2206_30min_R1 3 FGEYNSNMSPEEK 13 0 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 1 FGEYNS(0.151)NMS(0.849)PEEK;FGEYNS(0.046)NMS(0.954)PEEK;FGEYNS(0.095)NMS(0.905)PEEK 188.19 0.00014662 110181000 19026.6 21220.8 21225 18505.2 14333.1 14292 15420.3 16649.5 18046.6 15042 TRUE FALSE 17408.28776 19839.32206 19784.30614 19930.47371 13762.18228 15101.20069 14391.63992 16503.93518 19922.60865 16905.51652 1.029740069 1.173541313 1.170286995 1.178933142 0.814064584 0.893270588 0.851298445 0.976245544 1.178467906 1 14.04520648 -6.243727958 24.71270264 0.943042785 1.142952364 0.44404386 0.101536069 670.0762494 934955.1781 0.031489195 0.040557 5.71E-07 6.243727958 0.199909579 FGEYNSNMS(ph)PEEK ddPTM_A459_MK2206_30min_R2 5 FGEYNSNMSPEEK 13 0 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 1 FGEYNSNMS(1)PEEK;FGEYNS(0.444)NMS(0.556)PEEK;FGEYNS(0.008)NMS(0.992)PEEK;FGEYNS(0.006)NMS(0.994)PEEK;FGEYNS(0.004)NMS(0.996)PEEK 169.98 0.00023965 136501700 179793 178336 176111 171745 178965 117154 235900 152646 137624 208900 TRUE FALSE 193558.0903 169480.0936 181982.4528 157712.8841 171937.9349 121612.3776 204926.0466 172597.3563 149594.2868 202083.6101 0.957811919 0.838663232 0.900530492 0.780433822 0.850825729 0.601792384 1.014065646 0.854088841 0.740259374 1 17.62459279 -10.65657454 21.15437956 1 0.836935719 0.167016592 0.108789556 0 0 0.102727091 0.024914979 2.21E-11 10.65657454 -0.163064281 FGGEHVPNS(ph)PFQVTALAGDQPSVQPPLR ddPTM_A459_MK2206_30min_R1 1 FGGEHVPNSPFQVTALAGDQPSVQPPLR 28 0 P21333-2;P21333;Q60FE5;A0A087WWY3;H0Y5F3 P21333-2 FLNA Filamin-A 1 FGGEHVPNS(0.95)PFQVT(0.05)ALAGDQPSVQPPLR 58.924 0.0035216 18763000 5124.3 4962.9 5177.8 4694.7 5312.3 4836.1 5191.6 5495.5 4096 3431.8 TRUE FALSE 4688.451376 4639.814308 4826.345362 5056.286607 5100.699842 5109.915803 4845.277837 5447.453423 4521.793858 3856.957293 1.215582912 1.202972695 1.251334924 1.310952189 1.322467286 1.324856724 1.25624358 1.412370687 1.172373328 1 11.91324746 -8.530776766 23.03809568 0.999999997 1.285747335 0.704118634 0.057771992 192.0934861 560327.5666 0.058247758 0.015039506 2.95E-09 8.530776766 0.285747338 FGGEHVPNS(ph)PFQVTALAGDQPSVQPPLR ddPTM_A459_MK2206_30min_R2 4 FGGEHVPNSPFQVTALAGDQPSVQPPLR 28 0 P21333-2;P21333;Q60FE5;A0A087WWY3;H0Y5F3 P21333-2 FLNA Filamin-A 1 FGGEHVPNS(0.999)PFQVT(0.001)ALAGDQPSVQPPLR;FGGEHVPNS(1)PFQVTALAGDQPSVQPPLR;FGGEHVPNS(1)PFQVTALAGDQPSVQPPLR;FGGEHVPNS(0.965)PFQVT(0.035)ALAGDQPSVQPPLR 86.519 1.91E-05 39344300 130164 163435 162657 169260 174493 162925 171732 130099 168379 152743 TRUE FALSE 140129.4559 155319.0556 168079.9032 155430.9166 167641.5281 169125.225 149183.3821 147103.386 183024.3011 147759.0084 0.948364891 1.051164712 1.137527282 1.051921763 1.134560457 1.144601787 1.009639843 0.995562894 1.238667632 1 17.17288656 -4.817746924 3.436888932 1.088697134 0.936308813 0.24779683 0.07373993 0.38365466 7.483246487 0.018152527 0.145494109 1.52E-05 4.817746924 -0.152388321 FGGPVHHQAQR ddPTM_A459_MK2206_30min_R1 2 FGGPVHHQAQR 11 0 Q15717;Q15717-2 Q15717 ELAVL1 ELAV-like protein 1 0 ; 81.525 0.023532 3966400 4983 5080.5 4997.9 4372 4900.2 4098.8 4925.4 4387.1 2571.6 4307.7 FALSE TRUE 4559.169683 4749.758527 4658.656473 4708.732198 4705.014658 4330.870514 4596.835553 4348.744047 2838.927023 4841.370397 0.941710571 0.981077285 0.962259875 0.97260317 0.971835301 0.894554673 0.949490573 0.898246507 0.58638914 1 12.24119976 -8.014753953 24.23244769 0.776235627 0.951809369 0.302828388 0.095549406 443.3979771 728248.1613 0.054845914 0.02238752 9.67E-09 8.014753953 0.175573742 FGGPVHHQAQR ddPTM_A459_MK2206_30min_R2 1 FGGPVHHQAQR 11 0 Q15717;Q15717-2 Q15717 ELAVL1 ELAV-like protein 1 0 80.755 0.024356 3391100 13173 14816 14299 16474 15041 15757 17195 15069 13396 13521 FALSE TRUE 14181.53501 14080.25898 14775.72152 15128.0215 14450.41477 16356.64368 14937.27585 17038.57004 14561.15987 13079.81088 1.084230892 1.076487964 1.129658652 1.156593291 1.104787745 1.250526008 1.142010078 1.302661804 1.113254618 1 13.67505406 -5.5683354 1.089798789 1.173118335 1.070216344 0.08658121 0.078580525 1.185610141 2.463769403 0.026740241 0.104075948 2.70E-06 5.5683354 -0.102901991 FGGS(ph)GSQVDSAR ddPTM_A459_MK2206_30min_R2 1 FGGSGSQVDSAR 12 0 Q13200;Q13200-3;Q13200-2 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 FGGS(0.997)GS(0.003)QVDSAR 163.33 0.00049983 14346000 22880 33381 29285 31714 28499 34434 26476 25185 25358 26242 TRUE FALSE 24631.71039 31723.34808 30261.34728 29122.86475 27379.98606 35744.41 22999.6694 28476.76597 27563.593 25385.72569 0.970297666 1.249652993 1.192061541 1.147214191 1.078558336 1.408051534 0.906007954 1.121762928 1.085791021 1 14.63172988 -7.29630073 24.99999867 1.03853744 1.172954543 0.265256883 0.118477848 934.4434283 670110.4621 0.047817195 0.032239873 5.05E-08 7.29630073 0.134417103 FGGSGS(ph)QVDSAR ddPTM_A459_MK2206_30min_R2 2 FGGSGSQVDSAR 12 0 Q13200;Q13200-3;Q13200-2 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 FGGS(0.132)GS(0.867)QVDS(0.001)AR;FGGS(0.197)GS(0.787)QVDS(0.015)AR 137.09 0.0013528 17030400 49771 61636 46824 57866 66694 63029 58787 47814 53195 52231 TRUE FALSE 53581.50603 58575.24587 48385.08879 53138.1627 64075.25845 65427.61276 51068.19628 54063.45397 57821.80495 50526.70675 1.060459101 1.159292771 0.957614139 1.051684666 1.268146344 1.294911483 1.010716897 1.06999758 1.144381035 1 15.62475853 -4.502331595 15.35582104 1.110090878 0.957846781 0.015359222 0.106301426 1812649.674 36984050.14 0.028060673 6397442.555 3.15E-05 4.502331595 -0.152244097 FGINIPS(ph)PEHSNTIDVCNTVDIK ddPTM_A459_MK2206_30min_R2 1 FGINIPSPEHSNTIDVCNTVDIK 23 0 C9IZ03;Q9HCI7-2;Q9HCI7 C9IZ03 MSL2 E3 ubiquitin-protein ligase MSL2 1 FGINIPS(0.975)PEHS(0.024)NT(0.001)IDVCNTVDIK 92.336 0.0010031 0 14384 17376 13244 18665 14899 15779 16876 18190 12915 12700 TRUE FALSE 15485.2501 16513.13311 13685.54835 17140.00979 14313.9904 16379.4809 14660.16093 20567.49546 14038.32336 12285.60004 1.260439055 1.344104729 1.113950341 1.39513005 1.165103076 1.33322596 1.193280009 1.674114035 1.142664852 1 13.5846807 FGQAAT(ph)MEGIGAIGGTPPAFNR ddPTM_A459_MK2206_30min_R1 2 FGQAATMEGIGAIGGTPPAFNR 22 0 Q15233-2;Q15233 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 1 FGQAAT(0.944)MEGIGAIGGT(0.056)PPAFNR;FGQAAT(0.998)MEGIGAIGGT(0.002)PPAFNR 93.649 0.0026974 73034000 3626 3219.5 3357.2 2896.3 3791.2 3339.5 3555 3188 2835.6 2296.96 TRUE FALSE 3317.589659 3009.909965 3129.322618 3119.373528 3640.188476 3528.579604 3317.852436 3160.127652 3130.370767 2581.524746 1.285127971 1.165942713 1.212199349 1.208345391 1.41009242 1.366858718 1.285229763 1.224132233 1.212605369 1 11.33400771 -8.833146757 1.356021215 1.000572938 1.273054116 0.57609593 0.069784519 0.913788022 2.771101452 0.075685466 0.022450876 1.47E-09 8.833146757 0.272481178 FGQAATMEGIGAIGGT(ph)PPAFNR ddPTM_A459_MK2206_30min_R1 4 FGQAATMEGIGAIGGTPPAFNR 22 0 Q15233-2;Q15233 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 1 FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR 188.86 1.53E-21 296538000 5205.77 4518.38 4430.99 3710.46 4975.01 3834.84 4280.83 4118.44 3643.85 4154.64 TRUE FALSE 4762.991925 4224.232641 4130.226744 3996.240272 4776.844817 4051.965327 3995.263642 4082.432913 4022.641247 4669.348169 1.020054995 0.904672877 0.884540324 0.855845426 1.023021767 0.867779651 0.855636268 0.874304671 0.861499529 1 12.18900545 FGQAATMEGIGAIGGT(ph)PPAFNR ddPTM_A459_MK2206_30min_R2 8 FGQAATMEGIGAIGGTPPAFNR 22 0 Q15233-2;Q15233 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 1 FGQAATMEGIGAIGGT(1)PPAFNR;FGQAAT(0.042)MEGIGAIGGT(0.958)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAAT(0.004)MEGIGAIGGT(0.996)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR 141.5 1.56E-05 288834900 254237.6 265545 259377.7 298771.7 264022 260675 278341 224380.5 229592.1 265499 TRUE FALSE 273702.2261 252358.4214 268025.2231 274361.0964 253655.1697 270595.1698 241794.4924 253707.8018 249561.6059 256835.7894 1.065670119 0.982567196 1.043566489 1.068235455 0.987616135 1.053572676 0.941436133 0.98782106 0.971677687 1 17.97048673 -7.255036174 24.99637329 0.974218808 1.031166795 0.463232644 0.030675358 459.7159113 1794608.679 0.01144877 0.008650789 5.56E-08 7.255036174 0.056947987 FGS(ph)NINLEADES ddPTM_A459_MK2206_30min_R1 1 FGSNINLEADES 12 0 Q9NQP4 Q9NQP4 PFDN4 Prefoldin subunit 4 1 FGS(1)NINLEADES 94.728 0.018689 1523200 1567.8 1395 1513.8 1445 1113 937.19 1161.1 1272.9 1216.6 1088 TRUE FALSE 1434.450377 1304.185246 1411.047474 1556.29415 1068.666853 990.2528879 1083.645138 1261.77117 1343.069924 1222.789654 1.173096593 1.06656549 1.153957648 1.272740692 0.873958043 0.809830934 0.886207316 1.031879167 1.098365462 1 10.25596054 -6.269035389 24.99909236 0.941432006 1.158543174 0.574325061 0.091046236 474.3789341 1561217.952 0.031147461 0.035978192 5.38E-07 6.269035389 0.217111167 FGS(ph)TLQLDLEK ddPTM_A459_MK2206_30min_R2 1 FGSTLQLDLEK 11 0 E5RIQ4;E5RIK1;A0A0D9SF44;A0A0R4J2E2;Q9Y3T6-3;Q9Y3T6 E5RIQ4 R3HCC1 R3H and coiled-coil domain-containing protein 1 1 FGS(0.826)T(0.174)LQLDLEK 132.86 0.0019315 3382500 20925 26905 21589 18313 18375 15032 23044 15458 11847 20017 TRUE FALSE 22527.03409 25568.93682 22308.76648 16816.76932 17653.50517 15604.05329 20018.29512 17478.41368 12877.43065 19363.84693 1.163355307 1.320447167 1.152083394 0.868462211 0.911673452 0.805834365 1.033797426 0.902631266 0.665024398 1 14.24107797 -5.671310135 3.881895989 0.883209671 1.241031056 0.687082267 0.102387471 0.120181066 3.42392474 0.028116882 0.050480908 2.13E-06 5.671310135 0.357821384 FGSTGST(ph)PPVS(ph)PTPSER ddPTM_A459_MK2206_30min_R2 3 FGSTGSTPPVSPTPSER 17 0 W0Z7M9;A0A499FIJ6;A0A494BZX7;B0QY83;Q969V6;E7ER32;A0A087X287;A0A087WU73 W0Z7M9 mkl1;MKL1 MKL/myocardin-like protein 1 2 FGST(0.001)GS(0.001)T(0.998)PPVS(0.999)PT(0.001)PSER;FGSTGST(1)PPVS(0.998)PT(0.002)PSER;FGST(0.001)GS(0.007)T(0.992)PPVS(0.996)PT(0.004)PSER 189.52 1.23E-05 18966600 123991 131512 128319 134558 123018 110140 137721 116179 97297 112159 TRUE FALSE 133483.8463 124981.3053 132597.0914 123564.181 118187.6952 114331.4549 119638.0673 131363.9942 105759.7172 108499.261 1.230274244 1.151909277 1.222101332 1.138848134 1.089294933 1.053753305 1.102662508 1.210736303 0.974750576 1 16.72732569 -1.522878745 0.115051174 0.954624952 1.775810656 0.519478463 0.059330154 90.38639529 0.723136102 0.482484693 11.83179872 0.03 1.522878745 0.821185704 FGSTGST(ph)PPVSPTPSER ddPTM_A459_MK2206_30min_R1 1 FGSTGSTPPVSPTPSER 17 0 W0Z7M9;A0A499FIJ6;A0A494BZX7;B0QY83;Q969V6;E7ER32;A0A087X287;A0A087WU73 W0Z7M9 mkl1;MKL1 MKL/myocardin-like protein 1 1 FGS(0.001)TGS(0.029)T(0.922)PPVS(0.039)PT(0.008)PS(0.001)ER 85.28 0.027624 8810200 1814.7 1513 1938.7 1694.4 1914.1 1660.3 2261.4 1924.3 2126.3 2115.6 TRUE FALSE 1660.350236 1414.503425 1807.106446 1824.902982 1837.857344 1754.304751 2110.546132 1907.476048 2347.336494 2377.6965 0.698302006 0.594904953 0.760024017 0.767508798 0.77295708 0.737816938 0.887643201 0.802236975 0.987231337 1 11.21534886 -7.199458243 0.299431253 1.031119334 0.603137539 0.784410577 0.055406108 0.86858169 0.206564394 0.083068486 0.134073113 6.32E-08 7.199458243 -0.427981796 FGT(ph)FGGLGSK ddPTM_A459_MK2206_30min_R2 1 FGTFGGLGSK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FGT(1)FGGLGSK 118.87 0.013046 11494000 79055 62923 63134 39357 49764 32846 57634 44261 42958 55395 TRUE FALSE 85107.51158 59798.33532 65238.85605 36141.4072 47810.01532 34095.97755 50066.58657 50046.06467 46694.40919 53587.46569 1.588198107 1.115901537 1.217427531 0.674437702 0.892186535 0.636267775 0.934296592 0.933913631 0.871368119 1 15.70960797 -4.68059112 1.02738353 0.850114242 2.035743404 0.704414018 0.141771993 1.186596169 0.884545934 0.045373486 1.629193673 2.09E-05 4.68059112 1.185629162 FGVSSS(ph)S(ph)SGPS(ph)QTLTSTGNFK ddPTM_A459_MK2206_30min_R2 1 FGVSSSSSGPSQTLTSTGNFK 21 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 3 FGVS(0.451)S(0.495)S(0.521)S(0.521)S(0.011)GPS(0.825)QT(0.136)LT(0.025)S(0.007)T(0.006)GNFK 64.589 0.027704 10858000 21437 25681 23512 27978 21289 17680 21973 18862 20149 22751 TRUE FALSE 23078.2332 24405.71888 24295.87835 25692.1079 20453.08689 18352.82479 19087.91871 21327.32816 21901.5236 22008.63673 1.048598942 1.108915522 1.103924729 1.167364804 0.929320936 0.83389194 0.867292188 0.969043581 0.995133132 1 14.42578216 -6.275452081 23.55749261 0.922713621 1.107089439 0.698195932 0.05606811 207.6150123 349031.6014 0.018539777 0.021140307 5.30E-07 6.275452081 0.184375818 FGYVDFESAEDLEK ddPTM_A459_MK2206_30min_R1 1 FGYVDFESAEDLEK 14 0 P19338 P19338 NCL Nucleolin 0 253.76 1.04E-92 0 388.08 603.6 500.8 396.7 539.48 444.39 495.78 613.53 482.18 483.9 FALSE TRUE 355.0717581 564.3055303 466.8070913 427.2539027 517.9913692 469.5509778 462.7074208 608.1659719 532.3043365 543.8491853 0.652886439 1.037614003 0.858339231 0.785611001 0.952454069 0.863384538 0.850800982 1.118262173 0.978771966 1 9.087062823 -7.746979545 24.97868097 1.036387802 0.865410497 0.388735239 0.100189673 223.7583154 386533.3291 0.044838092 0.025736999 1.79E-08 7.746979545 -0.170977305 FHALSS(ph)PQSPFPSTPTSR ddPTM_A459_MK2206_30min_R2 1 FHALSSPQSPFPSTPTSR 18 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 FHALS(0.233)S(0.76)PQS(0.007)PFPSTPTSR 71.434 0.014385 5377000 17130 24529 20159 30286 27436 30542 27456 22898 28204 25479 TRUE FALSE 18441.48597 23310.92553 20831.091 27811.53692 26358.72479 31704.29721 23850.99422 25890.84722 30657.13294 24647.62232 0.748205475 0.945767719 0.845156207 1.128365915 1.069422618 1.28630246 0.967679313 1.050439953 1.243817052 1 14.58916086 -5.76028622 24.99454564 1.108830279 0.856315538 0.570831746 0.103268335 22.00692949 476972.2192 0.027835635 0.044967246 1.74E-06 5.76028622 -0.252514741 FHDFDHR ddPTM_A459_MK2206_30min_R1 4 FHDFDHR 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3;K7EII0;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 0 ;;; 154.01 0.0025041 49229800 6803.1 6608.4 7476.08 6345.7 7191.2 6499.9 6752.1 6007.6 5085.94 5236 FALSE TRUE 6224.46062 6178.191959 6968.624519 6834.446914 6904.759276 6867.918721 6301.679729 5955.076187 5614.641663 5884.67521 1.057740725 1.049878156 1.184198664 1.161397472 1.173345857 1.167085434 1.070862793 1.011963443 0.954112413 1 12.52274708 -7.664003801 2.469008682 0.980382193 1.133669371 0.668456306 0.045356549 0.191090236 2.33654355 0.030553808 0.014613381 2.17E-08 7.664003801 0.153287178 FHDFDHR ddPTM_A459_MK2206_30min_R2 2 FHDFDHR 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3;K7EII0;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 0 ; 139.31 0.0042381 10715500 26313 55395 32551 48232 55138 43523 42147 27730.4 21142.8 40068 FALSE TRUE 28327.54351 52644.16485 33636.23409 44291.29131 52973.00507 45179.29826 36613.04827 31354.85849 22981.76253 38760.58444 0.730833756 1.358188108 0.867794812 1.142688944 1.36667199 1.165598995 0.944594846 0.80893668 0.59291579 1 15.2423027 -7.55571433 2.916599838 0.774909691 1.118131989 0.30555198 0.205092643 0.295584842 5.119326046 0.105770537 0.057661043 2.78E-08 7.55571433 0.343222298 FHDLLSQLDDQYSR ddPTM_A459_MK2206_30min_R1 1 FHDLLSQLDDQYSR 14 0 A0A669KB68;A0A669KB56;A0A669KBA4;A0A669KB53;P42224;A0A669KB75;A0A669KB52;J3KPM9;A0A669KBI6;P42224-2;E7EPD2;D2KFR9;A0A669KB17;E7ENM1 A0A669KB68 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription 0 111.66 0.0054241 10948000 2589.6 2162.2 2478 2348.8 2085 1928.9 2297.1 2179.1 1851.8 1865.5 FALSE TRUE 2369.340921 2021.440387 2309.800264 2529.704983 2001.950035 2038.112651 2143.86465 2160.048358 2044.301237 2096.612224 1.130080658 0.964146047 1.101682151 1.206567888 0.95484993 0.972098048 1.022537514 1.030256494 0.975049756 1 11.03384434 -6.29845806 24.99993927 0.994463361 1.090947142 0.437105047 0.05969895 635.0657125 428879.1255 0.019308414 0.021894291 5.03E-07 6.29845806 0.096483782 FHDT(ph)SSPLLISGTSAAELPWAVKPEDK ddPTM_A459_MK2206_30min_R2 1 FHDTSSPLLISGTSAAELPWAVKPEDK 27 1 B1AUU8;P42566 B1AUU8 EPS15 Epidermal growth factor receptor substrate 15 1 FHDT(0.36)S(0.32)S(0.32)PLLISGTSAAELPWAVKPEDK 59.943 0.0029832 8656900 10705 19006 12878 14386 16819 12080 21265 12710 10218 16914 TRUE FALSE 11524.58303 18062.18968 13307.34609 13210.61778 16158.60155 12539.71286 18472.87996 14371.24064 11106.74317 16362.09757 0.704346309 1.103904289 0.813303187 0.807391456 0.987562963 0.766387856 1.129004388 0.878325079 0.67880925 1 13.99807009 FHDTS(ph)SPLLISGTSAAELPWAVKPEDK ddPTM_A459_MK2206_30min_R1 1 FHDTSSPLLISGTSAAELPWAVKPEDK 27 1 B1AUU8;P42566 B1AUU8 EPS15 Epidermal growth factor receptor substrate 15 1 FHDT(0.107)S(0.446)S(0.446)PLLISGTSAAELPWAVKPEDK 125.37 3.17E-12 33842000 5552.1 4802.9 5699 4201.8 5776.9 5961.5 6587.2 5276.2 4890 4825.6 TRUE FALSE 5079.86474 4490.230337 5312.167758 4525.423364 5546.79384 6299.034978 6147.779907 5230.07074 5398.332999 5423.431759 0.936651361 0.827931564 0.979484576 0.834420633 1.022746129 1.161448186 1.133559005 0.964347109 0.995372163 1 12.40499031 -6.399505384 5.627243662 1.057632397 0.896773945 0.527202311 0.070490774 0.189095624 7.919289591 0.023112077 0.02618778 3.99E-07 6.399505384 -0.160858453 FHDTS(ph)SPLLISGTSAAELPWAVKPEDK ddPTM_A459_MK2206_30min_R2 2 FHDTSSPLLISGTSAAELPWAVKPEDK 27 1 B1AUU8;P42566 B1AUU8 EPS15 Epidermal growth factor receptor substrate 15 1 FHDT(0.162)S(0.419)S(0.419)PLLISGTSAAELPWAVKPEDK;FHDT(0.108)S(0.446)S(0.446)PLLISGTSAAELPWAVKPEDK 121.48 3.38E-12 11871200 52860 84704 63523 83053 94368 66143 113043 68204 60745 98392 TRUE FALSE 56907.00224 80497.72253 65640.82512 76267.30423 90662.63816 68660.11821 98200.31831 77118.49698 66028.4903 95181.4771 0.597878957 0.845728864 0.689638647 0.80128305 0.952523967 0.721360083 1.031716688 0.81022589 0.693711553 1 16.53839322 -3.64702557 0.556644697 0.861998613 9.30E-14 0.278751084 0.116318752 18.41625402 1.651697079 0.057694509 13.59091194 0.000225411 3.64702557 -0.861998613 FHDTS(ph)SPLMVTPPSAEAHWAVR ddPTM_A459_MK2206_30min_R1 1 FHDTSSPLMVTPPSAEAHWAVR 22 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 FHDT(0.084)S(0.493)S(0.42)PLMVT(0.003)PPSAEAHWAVR 82.36 0.0017305 8348600 1393.6 948.66 1102.4 666.15 1815.1 1565.5 1508.1 1267.7 873.55 896.47 TRUE FALSE 1275.067002 886.9020616 1027.572159 717.4569884 1742.800723 1654.137257 1407.497401 1256.616633 964.3586485 1007.531472 1.265535656 0.880272316 1.01989088 0.712093874 1.729772987 1.641772296 1.396976115 1.247223206 0.957149901 1 9.976609189 -6.250975351 24.97255047 1.360232765 0.966681542 0.306876457 0.26203354 860.2346153 2052961.021 0.080904563 0.103305267 5.61E-07 6.250975351 -0.393551222 FHDTS(ph)SPLMVTPPSAEAHWAVR ddPTM_A459_MK2206_30min_R2 2 FHDTSSPLMVTPPSAEAHWAVR 22 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 FHDT(0.131)S(0.434)S(0.434)PLMVT(0.001)PPSAEAHWAVR;FHDT(0.128)S(0.436)S(0.436)PLMVTPPSAEAHWAVR 79.589 0.00085053 8341000 13018.8 19304.3 14653.8 29162 33374 30278 29250 19318.9 17664.6 24309 TRUE FALSE 14015.52934 18345.67653 15142.35038 26779.37132 32063.56907 31430.25051 25409.43986 21843.94656 19201.03498 23515.79932 0.596004803 0.780142588 0.643922419 1.138782099 1.363490504 1.336558884 1.08052631 0.928905127 0.816516365 1 14.52134275 -5.76257386 24.99790703 1.112659149 0.684035133 0.580874888 0.163559052 23.29640647 513350.469 0.051477515 0.081481822 1.73E-06 5.76257386 -0.428624016 FHDTSS(ph)PLLISGTSAAELPWAVKPEDK ddPTM_A459_MK2206_30min_R1 1 FHDTSSPLLISGTSAAELPWAVKPEDK 27 1 B1AUU8;P42566 B1AUU8 EPS15 Epidermal growth factor receptor substrate 15 1 FHDT(0.046)S(0.186)S(0.768)PLLISGTSAAELPWAVKPEDK 124.21 3.26E-12 31138000 3742.9 3502.2 4204 2617.8 3925.3 3730.4 4178.1 3441.3 2712.4 3268.6 TRUE FALSE 3424.5467 3274.206143 3918.644193 2819.42341 3768.946989 3941.612024 3899.386572 3411.213077 2994.363686 3673.538845 0.932220087 0.89129482 1.066721861 0.767495194 1.025971726 1.072974097 1.061479608 0.928590447 0.815116925 1 11.84295481 FHDTSS(ph)PLMVTPPSAEAHWAVR ddPTM_A459_MK2206_30min_R1 2 FHDTSSPLMVTPPSAEAHWAVR 22 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 FHDT(0.023)S(0.077)S(0.9)PLMVTPPSAEAHWAVR;FHDT(0.043)S(0.179)S(0.778)PLMVTPPSAEAHWAVR 104.77 4.48E-05 122762000 4664.4 2743.5 3532 2688.7 5624.2 5281.4 4892.7 4203.1 2794.8 2343.12 TRUE FALSE 4267.668286 2564.897651 3292.257681 2895.78414 5400.176205 5580.428304 4566.31691 4166.35274 3085.329461 2633.403395 1.620590409 0.973985853 1.250191173 1.099635607 2.050645265 2.119093609 1.733998262 1.582117175 1.171612928 1 11.36271282 -6.23827108 24.75547707 1.67038058 1.218384693 0.194105982 0.359523983 1001.62534 1070242.757 0.108122364 0.139492941 5.78E-07 6.23827108 -0.451995887 FHDTSS(ph)PLMVTPPSAEAHWAVR ddPTM_A459_MK2206_30min_R2 5 FHDTSSPLMVTPPSAEAHWAVR 22 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 FHDT(0.012)S(0.044)S(0.944)PLMVTPPSAEAHWAVR;FHDT(0.01)S(0.041)S(0.948)PLMVTPPSAEAHWAVR;FHDT(0.316)S(0.316)S(0.368)PLMVTPPSAEAHWAVR;FHDT(0.02)S(0.064)S(0.916)PLMVTPPSAEAHWAVR;FHDT(0.178)S(0.16)S(0.661)PLMVT(0.001)PPSAEAHWAVR 120.79 2.72E-05 75853900 66390.6 129270 81631.2 163121 154397 184494 156552 110035 121680 133545 TRUE FALSE 71473.51538 122850.6398 84352.74347 149793.4925 148334.598 191515.0485 135996.5343 124416.9523 132263.5065 129187.4376 0.553254378 0.950948808 0.652948499 1.159505098 1.148212247 1.482458759 1.052707112 0.963073149 1.023810898 1 16.97910626 -5.766890308 24.99988452 1.13065642 0.742240361 0.547503533 0.165771136 103.854204 476314.6376 0.04832842 0.074061799 1.71E-06 5.766890308 -0.388416059 FHFPPLDTHS(ph)PTNDVQPGR ddPTM_A459_MK2206_30min_R1 3 FHFPPLDTHSPTNDVQPGR 19 0 P41162 P41162 ETV3 ETS translocation variant 3 1 FHFPPLDT(0.003)HS(0.983)PT(0.013)NDVQPGR;FHFPPLDT(0.178)HS(0.805)PT(0.017)NDVQPGR;FHFPPLDT(0.024)HS(0.963)PT(0.013)NDVQPGR 115.99 0.00035651 23452800 6945.4 6535.3 6737.7 5647 6795.5 6696.8 6572.7 6508.9 5529.5 5339.3 TRUE FALSE 6354.657258 6109.850782 6280.363696 6081.932918 6524.820845 7075.967029 6134.247176 6451.993374 6104.311313 6000.772794 1.058973148 1.018177324 1.046592483 1.013524945 1.087330094 1.179175962 1.022242865 1.075193745 1.017254197 1 12.55093259 -4.445194931 21.18710962 1.055284874 1.222232965 0 0.050560068 72617.18602 2677396.369 0.012552465 500179.8496 3.59E-05 4.445194931 0.166948091 FHFPPLDTHS(ph)PTNDVQPGR ddPTM_A459_MK2206_30min_R2 2 FHFPPLDTHSPTNDVQPGR 19 0 P41162 P41162 ETV3 ETS translocation variant 3 1 FHFPPLDT(0.038)HS(0.807)PT(0.154)NDVQPGR;FHFPPLDT(0.003)HS(0.953)PT(0.044)NDVQPGR 101.89 0.00059407 10762500 23487 34773 27010 36064 31739 32475 31464 22286 27966 25864 TRUE FALSE 25285.18278 33046.22338 27910.49992 33117.45584 30492.76738 33710.85888 27332.739 25198.85672 30398.43213 25020.0598 1.010596417 1.320789145 1.115524909 1.323636159 1.218732794 1.34735325 1.092433001 1.007146143 1.214962409 1 14.61079762 -7.41943528 9.175572866 1.076673992 1.226618721 0.29108627 0.110349102 0.443829072 36.16479828 0.04366119 0.029374797 3.81E-08 7.41943528 0.14994473 FHHTIGGSR ddPTM_A459_MK2206_30min_R1 1 FHHTIGGSR 9 0 P61313;E7ERA2 P61313 RPL15 60S ribosomal protein L15;Ribosomal protein L15 0 90.601 0.039801 5762700 2091.2 1020.2 1374.7 976.65 1731.2 1746 2712.6 2525.9 281.29 977.32 FALSE TRUE 1913.332459 953.7847946 1281.389194 1051.871752 1662.242638 1844.857011 2531.647403 2503.816323 310.5311021 1098.39778 1.741930377 0.868341881 1.166598492 0.957641914 1.513333938 1.679589166 2.304854807 2.279516918 0.282712791 1 10.1011849 -6.433082919 5.207514725 1.635391303 1.162041286 0.046349899 0.596988417 0.509199896 22.37575436 0.188395705 0.212434925 3.69E-07 6.433082919 -0.473350017 FHPEPYGLEDDQR ddPTM_A459_MK2206_30min_R1 1 FHPEPYGLEDDQR 13 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 0 99.844 0.016034 5725000 3467.6 3762.1 3047 2753.9 3883.1 3983.8 4286.3 3614.3 3076.7 2757 FALSE TRUE 3172.662411 3517.186606 2840.178129 2966.005855 3728.427904 4209.359313 4000.368748 3582.700556 3396.533975 3098.557974 1.023915782 1.135104341 0.916612874 0.957221353 1.203278407 1.358489771 1.291042085 1.156247708 1.096166024 1 11.59738125 -6.272346683 23.62253761 1.206072603 1.010734307 0.383484992 0.107168396 341.3004452 739171.1176 0.034547384 0.039603774 5.34E-07 6.272346683 -0.195338296 FHPEPYGLEDDQR ddPTM_A459_MK2206_30min_R2 3 FHPEPYGLEDDQR 13 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 0 ;; 122.46 0.0037136 13043800 80213 90222.8 80182 96594 94479 85561 99364 74915 81579 86738 FALSE TRUE 86354.16895 85742.46695 82855.22786 88701.96121 90769.27974 88817.08381 86317.38744 84706.64772 88674.59396 83907.74616 1.029156102 1.021865929 0.987456244 1.05713674 1.081774733 1.058508754 1.028717745 1.00952119 1.056810581 1 16.35651638 -5.777587878 24.99696987 1.043997152 1.013730064 0.214123406 0.025153207 359.8141899 556971.5293 0.007473168 0.011123842 1.67E-06 5.777587878 -0.030267088 FHPIQGHR ddPTM_A459_MK2206_30min_R1 2 FHPIQGHR 8 0 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 0 ; 142.64 0.0030943 6462400 6690.4 6937.7 6544.7 6244.1 5585.8 5401.8 7487 6529.2 1815.27 4575.3 FALSE TRUE 6121.346347 6486.054469 6100.463999 6725.021664 5363.305758 5707.645248 6987.555891 6472.115893 2003.973813 5142.122706 1.190431792 1.261357389 1.186370755 1.307829869 1.043013958 1.109978422 1.358885482 1.258646723 0.389717229 1 12.32814832 -8.242220076 24.92660492 0.694858604 1.213899328 0.622889297 0.16175013 401.5339216 520774.1143 0.102586662 0.038639512 5.73E-09 8.242220076 0.519040724 FHQLDIDDLQSIR ddPTM_A459_MK2206_30min_R2 4 FHQLDIDDLQSIR 13 0 P16152;E9PQ63;A8MTM1;P16152-2;O75828 P16152 CBR1;CBR3 Carbonyl reductase [NADPH] 1;Carbonyl reductase [NADPH] 3 0 ;;; 128.35 0.0029207 13304400 91804 125151 93970 131527 121325 119445 122831 96367 89609 116765 FALSE TRUE 98832.58483 118936.1833 97102.9129 120780.8234 116561.1709 123990.5632 106703.1422 108962.4978 97403.02884 112954.9676 0.874973336 1.052952215 0.859660402 1.069282971 1.031926026 1.097699072 0.944652054 0.964654323 0.862317354 1 16.78538819 -7.482960145 24.99120113 0.939022015 1.000652288 0.100677299 0.07985889 1136.795506 711696.7392 0.033024561 0.022261665 3.29E-08 7.482960145 0.061630273 FHS(ph)LPFSLTK ddPTM_A459_MK2206_30min_R1 2 FHSLPFSLTK 10 0 J3KRR7;Q9NQC7-2;Q9NQC7 J3KRR7 CYLD Ubiquitin carboxyl-terminal hydrolase CYLD 1 FHS(1)LPFSLTK;FHS(1)LPFSLTK 97.779 0.013405 8202900 19038.3 14626 17798.3 13976.8 14951.4 12177.4 13478.7 15681.9 13103.3 13651.2 TRUE FALSE 17418.99261 13673.84474 16590.20098 15053.29556 14355.85408 12866.87386 12579.56052 15544.7948 14465.43493 15342.41372 1.135348905 0.891244689 1.081329267 0.981155627 0.935697234 0.838647302 0.819920565 1.013190955 0.942839581 1 13.90523785 -4.751732033 24.80335257 0.943188019 1.135349331 0.361842174 0.075848889 430.6740634 1100335.281 0.020166919 0.256797798 1.77E-05 4.751732033 0.192161311 FHS(ph)PSTTWSPNK ddPTM_A459_MK2206_30min_R1 2 FHSPSTTWSPNK 12 0 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 FHS(0.989)PS(0.011)TTWSPNK;FHS(0.778)PS(0.125)T(0.078)T(0.02)WSPNK 193.49 0.00015596 36346000 5546.5 4885.9 5625.1 3753.5 4805.8 5415.3 5862.7 4258.8 5088.9 5238.2 TRUE FALSE 5074.741049 4567.827022 5243.283884 4042.59522 4614.37481 5721.909606 5471.60998 4221.565761 5617.909366 5887.147762 0.862003343 0.775898144 0.890632289 0.68668146 0.783804823 0.971932392 0.929416111 0.717081672 0.954266751 1 12.52335312 -6.737093661 24.94246156 0.897786804 0.797237302 0.286026565 0.088637189 341.9928548 350374.6867 0.029355321 0.029341415 1.83E-07 6.737093661 -0.100549503 FHS(ph)PSTTWSPNK ddPTM_A459_MK2206_30min_R2 1 FHSPSTTWSPNK 12 0 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 FHS(0.78)PS(0.217)T(0.002)T(0.001)WSPNK 96.756 0.016828 15336000 55572 48127 42990 57064 44452 50448 60648 43382 37120 57231 TRUE FALSE 59826.63505 45737.08316 44423.26514 52401.68866 42706.59113 52367.83399 52684.84475 49052.17635 40348.6305 55363.55716 1.080614002 0.826122553 0.802391816 0.946501478 0.771384523 0.94588998 0.951615963 0.886001169 0.72879404 1 15.75664902 -4.753828961 24.99039709 0.871246545 1.080614377 0.351011882 0.084576382 307.3147582 1009048.728 0.020406129 0.211699535 1.76E-05 4.753828961 0.209367832 FHSPS(ph)TTWSPNKDTPQEK ddPTM_A459_MK2206_30min_R1 2 FHSPSTTWSPNKDTPQEK 18 1 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 FHS(0.01)PS(0.378)T(0.304)T(0.304)WS(0.003)PNKDTPQEK;FHS(0.033)PS(0.474)T(0.378)T(0.112)WS(0.003)PNKDTPQEK 78.69 0.0069967 40066000 5188.3 4531.9 5155.6 4656 5219.9 5045.1 4723.8 4879.7 3844 2888.5 TRUE FALSE 4747.00784 4236.872486 4805.652236 5014.605927 5011.98033 5330.749202 4408.683921 4837.037297 4243.597556 3246.349187 1.462260394 1.305119148 1.480325116 1.544690863 1.543882078 1.642075111 1.358043657 1.489992918 1.307190728 1 11.66460247 -8.694017696 1.530352021 0.999654491 1.482878197 0.72599289 0.090098012 0.366515572 1.687552978 0.091888738 0.026704618 2.02E-09 8.694017696 0.483223706 FHSPS(ph)TTWSPNKDTPQEK ddPTM_A459_MK2206_30min_R2 1 FHSPSTTWSPNKDTPQEK 18 1 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 FHS(0.006)PS(0.374)T(0.306)T(0.306)WS(0.008)PNKDTPQEK 74.141 0.0090839 13719000 17900 50908 30796 43577 49207 40337 42893 36747 34971 36499 TRUE FALSE 19270.43776 48379.98275 31822.72327 40016.6197 47274.88593 41872.0528 37261.09758 41549.95907 38012.71437 35308.04062 0.545780435 1.370225645 0.901288282 1.133357133 1.338926916 1.185907008 1.055314793 1.176784617 1.076602204 1 15.10770914 -4.747316227 24.99990164 1.140837443 0.54577893 0.631489878 0.135608707 468.6816396 829583.1177 0.032679326 0.676288785 1.79E-05 4.747316227 -0.595058513 FHSQLMR ddPTM_A459_MK2206_30min_R1 1 FHSQLMR 7 0 P49458 P49458 SRP9 Signal recognition particle 9 kDa protein 0 143.37 9.50E-05 0 938.69 1287.6 1200.8 1357.4 1459.8 1233 1182.4 1144.7 1044.4 1270.6 FALSE TRUE 858.8494862 1203.777006 1119.293042 1461.947183 1401.653075 1302.811394 1103.524253 1134.692009 1152.969117 1428.011521 0.601430362 0.842974296 0.783812333 1.023764278 0.981541854 0.912325549 0.772769853 0.794595836 0.807394829 1 10.4797919 -4.365238648 1.514599645 0.88367134 0.112100429 0.475528416 0.088963878 3.426807623 3.169137503 0.027121042 5.39524385 4.31E-05 4.365238648 -0.771570911 FHSQLMR ddPTM_A459_MK2206_30min_R2 2 FHSQLMR 7 0 P49458 P49458 SRP9 Signal recognition particle 9 kDa protein 0 ; 193.98 6.02E-06 6499800 13719.8 17356.6 17759.1 17617.9 19833.1 21300 18651.7 13966.8 19515.4 17768.5 FALSE TRUE 14770.19844 16494.69648 18351.17953 16178.46121 19054.35284 22110.58643 16202.70939 15792.30872 21212.81422 17188.7153 0.859296241 0.959623578 1.067629501 0.941225736 1.10853851 1.286343164 0.942636439 0.91876027 1.234112838 1 14.0691741 -4.43876608 0.909897289 1.069207143 0.60782598 0.242998331 0.116016769 5.724242266 2.441312573 0.040831539 3.035760009 3.64E-05 4.43876608 -0.461381162 FHVEEEGK ddPTM_A459_MK2206_30min_R1 5 FHVEEEGK 8 0 P00558-2;P00558;P07205 P00558-2 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 0 ;;;; 150.05 0.0018808 64771000 37837.4 42445.2 42389.7 33742.5 31410.3 30409.6 37752.5 31076.1 39199.2 40651 FALSE TRUE 34619.13044 39682.00977 39512.40527 36341.3532 30159.16124 32131.36527 35234.09961 30804.40493 43274.09712 45687.15278 0.757743224 0.868559482 0.864847181 0.795439221 0.660123457 0.703291042 0.771203664 0.674246545 0.947183059 1 15.47950092 -8.406777606 5.250651369 0.997367899 0.765494042 0.616846514 0.067169908 0.15665669 5.668454294 0.07219215 0.018781286 3.92E-09 8.406777606 -0.231873856 FHVEEEGK ddPTM_A459_MK2206_30min_R2 4 FHVEEEGK 8 0 P00558-2;P00558;P07205 P00558-2 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 0 ;;; 150.4 0.0018121 88215000 674810 701400 650740 666300 611945 499477 745340 606020 457372 739920 FALSE TRUE 726473.9724 666569.4959 672435.3468 611861.1586 587916.9645 518484.9472 647475.9627 685228.8948 497153.3898 715776.471 1.01494531 0.931253712 0.9394488 0.854821559 0.821369503 0.724367129 0.904578439 0.957322464 0.694565147 1 19.44914959 -5.546495751 1.747890613 0.843735064 0.982216621 0.244867695 0.090245212 0.540545878 3.211182324 0.026882587 0.074234641 2.84E-06 5.546495751 0.138481557 FICEQDHQNFLR ddPTM_A459_MK2206_30min_R1 1 FICEQDHQNFLR 12 0 Q92598-2;Q92598;Q92598-3;Q92598-4;A0A0A0MSM0 Q92598-2 HSPH1 Heat shock protein 105 kDa 0 181.66 0.00014629 11547000 2212.6 2441 2654.8 2226.5 2697.3 2145.4 2307.9 2325.3 2512.3 2025.2 FALSE TRUE 2024.406751 2282.090456 2474.599573 2397.985416 2589.860829 2266.870694 2153.944202 2304.970147 2773.462575 2276.097065 0.889420219 1.002633188 1.087211793 1.053551473 1.137851662 0.995946407 0.946332314 1.012685347 1.218516828 1 11.15234637 -4.831520108 2.976139405 1.053535561 0.871649289 0.318600323 0.074142988 0.432394143 5.93310804 0.019485645 0.17935941 1.47E-05 4.831520108 -0.181886272 FICVTPTTCSNTIDLPMS(ph)PR ddPTM_A459_MK2206_30min_R1 1 FICVTPTTCSNTIDLPMSPR 20 0 G8JLH9;P40763;P40763-2 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 1 FICVTPTTCS(0.004)NT(0.009)IDLPMS(0.988)PR 65.854 0.03062 5535000 2350.8 2485.3 2258.5 2325.1 2640.8 1792.7 2084.5 2080.2 1989.3 1739.8 TRUE FALSE 2150.852115 2323.506518 2105.199313 2504.179605 2535.611344 1894.201125 1945.446808 2062.013031 2196.094854 1955.339559 1.099989056 1.188287992 1.076641294 1.280687845 1.296762668 0.968732574 0.994940648 1.05455496 1.123127103 1 10.93320345 -6.772482488 24.99903433 1.029597587 1.187373548 0.535133111 0.074648795 188.8804295 427578.936 0.027858245 0.024798597 1.69E-07 6.772482488 0.157775961 FICVTPTTCSNTIDLPMS(ph)PR ddPTM_A459_MK2206_30min_R2 3 FICVTPTTCSNTIDLPMSPR 20 0 G8JLH9;P40763;P40763-2 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 1 FICVTPTTCSNTIDLPMS(1)PR;FICVTPTTCSNT(0.005)IDLPMS(0.995)PR;FICVTPTTCS(0.004)NT(0.015)IDLPMS(0.981)PR 129.32 0.00011917 16323300 54154 65005 55343 59935 62606 55248 65304 47262 48036 49342 TRUE FALSE 58300.07188 61776.94623 57188.108 55038.11878 60147.77387 57350.50135 56729.50636 53439.30567 52214.08445 47731.97458 1.221404989 1.294246609 1.198108993 1.153066037 1.260114931 1.201511185 1.188501143 1.119570396 1.093901623 1 15.5426684 -8.216503767 0.740451188 0.99962864 1.229553339 0.807844493 0.035545749 0.274369621 0.329169169 0.035563075 0.014589544 6.07E-09 8.216503767 0.229924699 FIDFIDT(ph)CLIK ddPTM_A459_MK2206_30min_R1 1 FIDFIDTCLIK 11 0 Q8N4C8;Q8N4C8-2;Q8N4C8-3;I3L2I2;A0A590UJE1;Q8N4C8-4;Q8N4C8-5 Q8N4C8;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 FIDFIDT(1)CLIK 93.143 0.045613 0 2811.5 2391.6 2745.5 2458.7 2502.5 2442.4 2459.6 2693.4 2263.4 2444.3 TRUE FALSE 2572.367161 2235.906405 2559.143109 2648.0695 2402.820126 2580.686577 2295.524572 2669.851888 2498.68853 2747.118338 0.93638746 0.813909752 0.931573669 0.963944459 0.874669319 0.939415875 0.835611827 0.971873636 0.909567125 1 11.42370334 -14.52287875 0.191009543 1.406663712 0.890918988 0.242239512 0.04946413 194.4953588 1.89936978 29.9777784 0.129059296 3.00E-15 14.52287875 -0.515744724 FIEEHATK ddPTM_A459_MK2206_30min_R2 1 FIEEHATK 8 0 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 124.92 0.0073348 3798900 48444 68549 55470 81751 72393 64502 76033 55186 67632 54303 FALSE TRUE 52152.90989 65144.95634 57319.34211 75071.68179 69550.48707 66956.66881 66049.77577 62398.99968 73514.50911 52531.09756 0.99280069 1.240121744 1.091150667 1.429090297 1.323986939 1.274610125 1.257346198 1.187848771 1.399447423 1 15.68088411 -4.022235026 1.150055612 1.266846449 1.23E-14 0.262487832 0.124203449 9.804882862 3.049891892 0.035561592 22.83598361 9.50E-05 4.022235026 -1.266846449 FIHQQPQSS(ph)SPVYGSSAK ddPTM_A459_MK2206_30min_R1 1 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 FIHQQPQSS(0.964)S(0.036)PVYGSSAK 165.53 1.06E-07 138820000 7957.5 6582.3 8537.9 7082 8018.6 8172.2 8751.1 7849.8 5848.5 5923.7 TRUE FALSE 7280.672839 6153.791074 7958.371136 7627.456867 7699.202182 8634.902902 8167.330086 7781.170026 6456.472504 6657.572678 1.093592694 0.924329537 1.195386295 1.145681352 1.15645785 1.297004677 1.226772952 1.168769821 0.96979377 1 12.70078056 -5.273318851 24.66687332 1.15979596 1.008961111 0.216415335 0.100414301 730.8805893 1517622.65 0.026223747 0.05528488 5.33E-06 5.273318851 -0.15083485 FIHQQPQSS(ph)SPVYGSSAK ddPTM_A459_MK2206_30min_R2 2 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 FIHQQPQS(0.027)S(0.486)S(0.486)PVYGSSAK;FIHQQPQS(0.001)S(0.498)S(0.498)PVY(0.001)GSSAK 102.9 0.0014473 313209000 177732 210900 192166 228940 253300 199538 256930 202902 206119 216540 TRUE FALSE 191339.2986 200427.0127 198572.7185 210234.8697 243354.1693 207131.5584 223194.7824 229421.9881 224046.858 209474.3175 0.913426051 0.956809479 0.947957348 1.003630765 1.161737497 0.988816008 1.065499508 1.095227285 1.069567194 1 17.67641385 -5.952098004 4.14464801 1.0661146 0.942606132 0.585796249 0.046613024 0.144640406 5.302123137 0.013111142 0.01961161 1.12E-06 5.952098004 -0.123508467 FIHQQPQSSS(ph)PVYGSSAK ddPTM_A459_MK2206_30min_R1 2 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 FIHQQPQS(0.001)S(0.114)S(0.885)PVYGSSAK;FIHQQPQS(0.004)S(0.032)S(0.935)PVY(0.028)GS(0.001)SAK 122.46 0.0009091 187529000 13274.4 11163.3 12742.7 10591.1 13652.9 12847.9 13944 12915.9 11077 10209.6 TRUE FALSE 12145.34257 10436.56714 11877.76103 11406.82836 13109.07608 13575.337 13013.8212 12802.97765 12228.49379 11474.44233 1.058469094 0.909548965 1.035149307 0.994107429 1.142458667 1.183093401 1.134157184 1.115782125 1.06571574 1 13.48613642 -6.254602323 24.44997408 1.117832704 0.995465893 0.437666999 0.058876614 333.9236641 1194140.944 0.01710881 0.021580284 5.56E-07 6.254602323 -0.12236681 FIHQQPQSSS(ph)PVYGSSAK ddPTM_A459_MK2206_30min_R2 2 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 FIHQQPQS(0.001)S(0.168)S(0.831)PVYGSSAK;FIHQQPQSS(0.204)S(0.796)PVYGSSAK 178.73 1.15E-09 295727000 423330 500200 409870 548760 534590 470830 592110 427430 442000 451000 TRUE FALSE 455740.4703 475360.7954 423534.8612 503924.5526 513599.3105 488747.7656 514365.2457 483296.5686 480444.361 436283.9069 1.044596106 1.089567568 0.970778098 1.155038141 1.177213512 1.120251648 1.178969101 1.107757038 1.101219535 1 18.73490773 -5.780285902 24.9999872 1.129397435 1.040439258 0.320316832 0.055474663 247.2513994 327979.0801 0.01496816 0.022244378 1.66E-06 5.780285902 -0.088958176 FIHQQPQSSSPVY(ph)GSSAK ddPTM_A459_MK2206_30min_R1 1 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 FIHQQPQS(0.011)S(0.209)S(0.049)PVY(0.584)GS(0.127)S(0.019)AK 143.94 0.0040405 6250800 2193.6 1931.7 2015.5 1721.3 2031.1 1908.9 1603.1 1735.6 1338.3 1159.9 TRUE FALSE 2007.022801 1805.945979 1878.693476 1853.874824 1950.196986 2016.980268 1496.160124 1720.425832 1477.421074 1303.597169 1.539603529 1.385355862 1.441161058 1.422122469 1.496011983 1.547241983 1.14771661 1.319752661 1.133341733 1 10.34828241 -7.989698813 0.817774936 1.013923574 1.46658792 0.757401043 0.088349631 0.295310461 0.387030076 0.082633558 0.03387909 1.02E-08 7.989698813 0.452664346 FIHQQPQSSSPVY(ph)GSSAK ddPTM_A459_MK2206_30min_R2 3 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 FIHQQPQSSS(0.001)PVY(0.598)GS(0.159)S(0.241)AK;FIHQQPQSS(0.001)S(0.002)PVY(0.968)GS(0.027)S(0.003)AK;FIHQQPQSSS(0.002)PVY(0.84)GS(0.12)S(0.038)AK 127.49 0.001771 33040000 167027 195972 188526 204605 244276 210962 234762 137288 157168 153810 TRUE FALSE 179814.7155 186240.3154 194811.3627 187888.117 234684.4969 218990.3067 203937.4674 155232.013 170838.1885 148791.1923 1.208503761 1.251689113 1.309293647 1.262763703 1.57727412 1.471796169 1.370628626 1.043287648 1.148174068 1 17.1829296 -7.759863936 24.99989668 1.07179809 1.354948645 0.593441478 0.108544934 32.21614505 511249.7971 0.060283636 0.032423614 1.74E-08 7.759863936 0.283150555 FIHQQPQSSSPVYGSS(ph)AK ddPTM_A459_MK2206_30min_R2 1 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 FIHQQPQSSSPVY(0.32)GS(0.231)S(0.449)AK 119.96 0.00063754 10052000 29507 31794 34585 37432 42089 33478 43231 22294 26585 24344 TRUE FALSE 31766.07861 30215.15619 35738.04664 34373.68586 40436.37438 34752.02875 37554.71777 25207.90235 28897.31525 23549.65727 1.348897703 1.283040167 1.517561221 1.459625737 1.717068487 1.475691487 1.594703368 1.070414828 1.227080076 1 14.52341844 -7.76774798 24.99987641 1.111560472 1.486259684 0.669204924 0.124291453 99.47444237 394191.3275 0.06987134 0.034866794 1.71E-08 7.76774798 0.374699212 FIIGSVSEDNS(ph)EDEISNLVK ddPTM_A459_MK2206_30min_R1 1 FIIGSVSEDNSEDEISNLVK 20 0 Q13085;A0A0C4DGT1;Q13085-4;A0A087X2F8;A0A087X126;A0A087WYK6 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase 1 FIIGSVS(0.004)EDNS(0.996)EDEISNLVK 110.38 0.00024939 5871200 1820.5 1950.6 1952.8 1610.6 1870.3 1766.6 1751.2 2019.2 1863.6 1638.9 TRUE FALSE 1665.656915 1823.615585 1820.249377 1734.648691 1795.801991 1866.623365 1634.380643 2001.546347 2057.327889 1841.939305 0.904295223 0.990051942 0.988224407 0.941751276 0.974951773 1.013401126 0.887315146 1.086651629 1.116935766 1 10.84700981 -7.78348382 24.99802907 1.076345363 0.961859735 0.545085786 0.046016476 172.7542338 195897.58 0.023872755 0.011482522 1.65E-08 7.78348382 -0.114485628 FIIPNVVK ddPTM_A459_MK2206_30min_R1 1 FIIPNVVK 8 0 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2 P00338 LDHA L-lactate dehydrogenase A chain 0 138.85 0.033824 8878400 8145 7972.5 8021.9 8013.7 7573.7 7394.9 7325.5 7897.9 6159.4 6620 FALSE TRUE 7452.224979 7453.488801 7477.395778 8630.916563 7272.023491 7813.592847 6836.829261 7828.849493 6799.691672 7440.135578 1.00162489 1.001794755 1.005008 1.160048291 0.977404701 1.050194955 0.918911919 1.052245542 0.913920398 1 12.8611132 -7.231783377 24.85193933 0.975623235 1.033294663 0.200585774 0.05979947 1136.115484 952073.8688 0.022327405 0.017291743 5.86E-08 7.231783377 0.057671428 FILPEGASQGMT(ph)PFR ddPTM_A459_MK2206_30min_R2 1 FILPEGASQGMTPFR 15 0 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390;H0Y4F5;H0Y314;H0Y6T5;H0Y7I1 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 FILPEGAS(0.002)QGMT(0.998)PFR 116.79 0.0050591 0 8088.8 9601.8 9311.5 8138.3 9005.7 8316.2 10947 6344.7 8824.2 8158.2 TRUE FALSE 8708.084747 9124.988574 9621.940763 7473.374857 8652.090968 8632.678818 9509.64575 7173.974075 9591.712965 7891.998602 1.103406778 1.156232918 1.219202036 0.946955928 1.096311771 1.093852046 1.204973066 0.90901867 1.215371853 1 12.94617499 -8.926499056 0.012899046 2.24E-07 2.125007 0.072670172 0.10162137 3452.508957 20.2800539 1717.721722 1620.174098 1.18E-09 8.926499056 2.125006776 FIPAPPS(ph)SPLR ddPTM_A459_MK2206_30min_R2 1 FIPAPPSSPLR 11 0 H7C0K1;Q9H9A5-5;Q9H9A5-2;Q9H9A5;Q9H9A5-6 H7C0K1 CNOT10 CCR4-NOT transcription complex subunit 10 1 FIPAPPS(0.846)S(0.154)PLR 78.548 0.047372 1450600 11662 11627 9837.4 15699 12069 11492 13175 8753.1 9023.2 12597 TRUE FALSE 12554.85169 11049.62009 10165.37401 14416.34148 11595.11042 11929.33611 11445.10667 9897.160224 9808.021626 12185.96092 1.030271783 0.906750002 0.834187314 1.183028698 0.951513836 0.978940946 0.939204282 0.81217725 0.80486239 1 13.5729324 -7.584907314 4.975347722 0.85722587 0.977359763 0.190364078 0.098237423 0.311554024 15.41283028 0.047904224 0.027152775 2.60E-08 7.584907314 0.120133893 FIPCS(ph)PFSDYVYK ddPTM_A459_MK2206_30min_R1 1 FIPCSPFSDYVYK 13 0 Q14195-2;Q14195 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 FIPCS(0.997)PFS(0.003)DYVYK 93.011 0.021951 0 1373.6 1429.6 1281.7 1478.4 1499.7 1095.4 1241.2 1238.7 1390.7 1023.6 TRUE FALSE 1256.768107 1336.53278 1194.701775 1592.266624 1439.963773 1157.420601 1158.401813 1227.870176 1535.268242 1150.411296 1.092451119 1.161786906 1.038499691 1.384084657 1.251694745 1.006092869 1.006945791 1.067331467 1.334538567 1 10.16793403 -6.757486934 24.99796026 1.082437711 1.187217916 0.143975234 0.125205823 219.4532696 1387975.964 0.043899855 0.042358669 1.75E-07 6.757486934 0.104780205 FIPHENGVHTIDVK ddPTM_A459_MK2206_30min_R1 2 FIPHENGVHTIDVK 14 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7 O75369-8 FLNB Filamin-B 0 ; 101.62 0.0046021 16237900 7368.8 7825.5 8126.8 6991.3 6956.2 7375.7 7270 7498 6529.6 6586.7 FALSE TRUE 6742.044865 7316.058528 7575.175459 7529.771137 6679.119824 7793.30576 6785.031565 7432.445777 7208.375286 7402.710123 0.910753596 0.988294612 1.023297594 1.017164121 0.902253325 1.05276387 0.916560483 1.00401686 0.97374815 1 12.85383782 -6.515504151 0.002673631 1.957773697 6.43E-05 0.025176799 0.048857328 276404.2007 245.8608499 89224.2135 90798.65059 3.05E-07 6.515504151 -1.957709402 FIQELSGS(ph)SPK ddPTM_A459_MK2206_30min_R1 1 FIQELSGSSPK 11 0 Q01664;I3L254 Q01664 TFAP4 Transcription factor AP-4 1 FIQELSGS(0.774)S(0.226)PK 225.72 1.19E-06 103340000 9247.3 12536 13457 11907 7190.2 7145.9 8032.4 9323.6 10394 9548.7 TRUE FALSE 8460.768575 11719.90412 12543.57633 12824.0792 6903.799109 7550.494683 7496.573252 9242.084748 11474.4935 10731.66505 0.788392905 1.092086277 1.168837853 1.194975724 0.643311087 0.703571594 0.698547077 0.861197653 1.069218378 1 13.38958631 -6.255776145 24.99977922 0.809542684 1.070985885 0.324378672 0.162113874 539.6814815 2382368.374 0.050693852 0.063625567 5.55E-07 6.255776145 0.261443201 FIQELSGS(ph)SPK ddPTM_A459_MK2206_30min_R2 1 FIQELSGSSPK 11 0 Q01664;I3L254 Q01664 TFAP4 Transcription factor AP-4 1 FIQELSGS(0.5)S(0.5)PK 198.37 1.98E-05 42601000 145370 142630 144090 126850 129680 95529 160000 114590 116820 147600 TRUE FALSE 156499.639 135547.2016 148893.8887 116485.9492 124588.1116 99164.42304 138991.8078 129567.3064 126980.7924 142783.8241 1.096060005 0.949317631 1.042792415 0.815820349 0.872564609 0.694507404 0.973442256 0.90743687 0.889321975 1 17.12347302 -5.753461761 24.99951817 0.871134645 1.021382815 0.387055216 0.086144717 185.692026 581897.9716 0.023329928 0.039506303 1.76E-06 5.753461761 0.15024817 FIQELSGS(ph)SPKR ddPTM_A459_MK2206_30min_R2 1 FIQELSGSSPKR 12 1 Q01664;I3L254 Q01664 TFAP4 Transcription factor AP-4 1 FIQELSGS(0.902)S(0.098)PKR 76.311 0.02464 16978000 14802 15605 24239 25426 21759 15698 23289 21312 20907 18561 TRUE FALSE 15935.2525 14830.07839 25047.11616 23348.61447 20904.63233 16295.39839 20231.12632 24097.55158 22725.45307 17955.35609 0.887492981 0.825941759 1.394966273 1.300370449 1.164256071 0.907550834 1.126746037 1.342081519 1.265664293 1 14.13212664 -5.241368495 24.84850932 1.190925407 0.856717281 0.460178097 0.143360796 711.4156759 880755.9016 0.039189049 0.103380872 5.74E-06 5.241368495 -0.334208126 FIQELSGSS(ph)PK ddPTM_A459_MK2206_30min_R1 1 FIQELSGSSPK 11 0 Q01664;I3L254 Q01664 TFAP4 Transcription factor AP-4 1 FIQELS(0.002)GS(0.292)S(0.706)PK 130.15 0.0024482 98727000 4833.6 5210.7 5643.9 5318.5 3263.8 2993 4261.4 3975.6 4416 3955.7 TRUE FALSE 4422.476938 4871.482483 5260.807793 5728.131792 3133.795935 3162.461073 3977.129781 3940.841748 4875.059003 4445.76198 0.994762418 1.095758726 1.18333096 1.288447699 0.704895122 0.711342867 0.894589004 0.886426616 1.096563204 1 12.118215 -6.259420106 24.99996915 0.868690447 1.140427791 0.485159287 0.129886496 163.3822464 2022780.772 0.041643047 0.051102559 5.50E-07 6.259420106 0.271737343 FIQELSGSS(ph)PK ddPTM_A459_MK2206_30min_R2 3 FIQELSGSSPK 11 0 Q01664;I3L254 Q01664 TFAP4 Transcription factor AP-4 1 FIQELSGS(0.024)S(0.976)PK;FIQELS(0.001)GS(0.037)S(0.962)PK;FIQELSGS(0.026)S(0.974)PK 167.73 0.00052008 83081000 198323 187291 204979 170185 180651 139342 231558 173123 157700 225135 TRUE FALSE 213506.7614 177990.4013 211812.8976 156280.3411 173557.734 144644.7575 201154.1564 195750.7705 171416.4609 217788.8634 0.980338287 0.817261262 0.972560737 0.717577284 0.796908213 0.664151303 0.92362003 0.898809827 0.787076338 1 17.73257066 -10.41536592 16.62465471 0.999999972 0.837229362 0.188965373 0.099429737 0 0 0.096809874 0.023479843 3.84E-11 10.41536592 -0.16277061 FIQELSGSS(ph)PKR ddPTM_A459_MK2206_30min_R2 1 FIQELSGSSPKR 12 1 Q01664;I3L254 Q01664 TFAP4 Transcription factor AP-4 1 FIQELSGS(0.033)S(0.967)PKR 85.976 0.015669 16990000 23390 28413 30817 31977 32782 23843 35023 29276 27005 37385 TRUE FALSE 25180.75638 27002.05174 31844.4234 29364.37681 31494.81396 24750.36207 30424.43803 33102.47372 29353.84609 36165.13051 0.696271686 0.746632222 0.880528369 0.81195274 0.870861338 0.684370877 0.841264433 0.915314648 0.811661556 1 15.14231174 -14.52287875 0.094524751 1.615401281 0.665826858 0.484874064 0.066968673 187.9835115 1.218716351 23.01124148 1.409411622 3.00E-15 14.52287875 -0.949574423 FIQENVFVAANHNGS(ph)PLSIK ddPTM_A459_MK2206_30min_R1 1 FIQENVFVAANHNGSPLSIK 20 0 E9PFD2;P11172-4;P11172-2;P11172-3;P11172 E9PFD2 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase 1 FIQENVFVAANHNGS(0.99)PLS(0.01)IK 125.98 0.00014467 47091000 3359.9 3084.8 3373.9 2684.9 3144.4 2837.9 3166.7 3321.4 2874.4 2227.3 TRUE FALSE 3074.122861 2883.978959 3144.889068 2891.691463 3019.15189 2998.579446 2955.455221 3292.36135 3173.204166 2503.234739 1.228060163 1.152100885 1.256330067 1.1551819 1.206100188 1.197881844 1.180654445 1.315242753 1.267641471 1 11.28957787 FIQENVFVAANHNGS(ph)PLSIK ddPTM_A459_MK2206_30min_R2 3 FIQENVFVAANHNGSPLSIK 20 0 E9PFD2;P11172-4;P11172-2;P11172-3;P11172 E9PFD2 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase 1 FIQENVFVAANHNGS(0.967)PLS(0.033)IK;FIQENVFVAANHNGS(0.96)PLS(0.04)IK;FIQENVFVAANHNGS(0.987)PLS(0.013)IK 99.378 0.0013201 11270000 91349 102914 94755 101594 106748 96034 113009 82037 80604 106756 TRUE FALSE 98342.74968 97803.44041 97914.08441 93293.44522 102556.5372 99688.64116 98170.78255 92759.51758 87614.79022 103272.5605 0.952264079 0.947041886 0.948113264 0.903371087 0.993066665 0.9652965 0.950598902 0.898201005 0.848384022 1 16.65609746 -7.755540677 24.18663375 0.904969381 0.951390261 0.125141341 0.040676427 141.22108 579064.3858 0.018991177 0.010574337 1.76E-08 7.755540677 0.04642088 FIS(ph)LFYT(ph)MVTPTLNPIIY(ph)T(ph)LRNK ddPTM_A459_MK2206_30min_R1 1 FISLFYTMVTPTLNPIIYTLRNK 23 1 Q8NGZ4 Q8NGZ4 OR2G3 Olfactory receptor 2G3 4 FIS(0.974)LFY(0.442)T(0.48)MVT(0.109)PT(0.27)LNPIIY(0.857)T(0.868)LRNK 42.309 0.045853 0 517.95 420.77 514.52 534.43 448.8 500.96 455.56 442.45 536.81 328.3 TRUE FALSE 473.8956326 393.3777965 479.5958159 575.5918912 430.9233457 529.3239223 425.1704236 438.5817063 592.6133205 368.9722825 1.284366482 1.066144573 1.299815294 1.559986802 1.167901672 1.434589934 1.152309926 1.188657596 1.606118802 1 8.527368634 -9.86549521 15.28253111 1.000000808 1.298502325 0.226972858 0.169176875 0 0 0.160910764 0.039026593 1.36E-10 9.86549521 0.298501517 FIVS(ph)PVPESR ddPTM_A459_MK2206_30min_R1 1 FIVSPVPESR 10 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4;H0YH68 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 FIVS(0.68)PVPES(0.32)R 110.84 0.0092149 3443700 1592.7 1725.6 1643.9 1390.9 1581.4 1743.7 1649.4 1650.1 1089.8 1276.3 TRUE FALSE 1457.232501 1613.263126 1532.316648 1498.027359 1518.409489 1842.426787 1539.371536 1635.67335 1203.08861 1434.41768 1.015905285 1.124681569 1.068249973 1.044345298 1.058554639 1.28444233 1.073168267 1.140304789 0.83872963 1 10.48624946 -8.253121446 24.99616961 0.919364811 1.102746621 0.456844699 0.07929636 482.2849754 1449322.491 0.055139358 0.020063531 5.58E-09 8.253121446 0.18338181 FIVS(ph)PVPESR ddPTM_A459_MK2206_30min_R2 2 FIVSPVPESR 10 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4;H0YH68 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 FIVS(0.999)PVPES(0.001)R;FIVS(1)PVPESR 108.31 0.010756 14020200 76289 91938 82434 106177 91413 94148 92082 76472 85426 88661 TRUE FALSE 82129.7445 87372.49261 85182.30842 97501.99946 87823.66631 97730.86811 79991.52279 86467.15297 92856.19907 85767.99883 0.957580282 1.018707371 0.993171224 1.136810941 1.023967768 1.139479403 0.932649985 1.00815169 1.08264388 1 16.38815184 -4.808592311 1.585864252 1.043062822 0.932789143 0.143431638 0.061237899 2.011370176 5.071543885 0.017285671 0.342320293 1.55E-05 4.808592311 -0.11027368 FIVT(ph)LDGVPSPPGYMSDQEEDMCFEGMK ddPTM_A459_MK2206_30min_R2 1 FIVTLDGVPSPPGYMSDQEEDMCFEGMK 28 0 Q6PJT7-5;Q6PJT7;G3V411;Q6PJT7-9;Q6PJT7-2;H0YJA2 Q6PJT7-5;Q6PJT7-9 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 FIVT(0.999)LDGVPS(0.001)PPGYMSDQEEDMCFEGMK 40.254 0.028733 4825800 18730 43780 20144 28405 27231 28426 45856 38398 13073 15319 TRUE FALSE 20163.9832 41605.94886 20815.59091 26084.22064 26161.77412 29507.77135 39835.05212 43416.75044 14210.06591 14819.14228 1.360671408 2.807581442 1.404642084 1.76017074 1.765404071 1.99119293 2.688080818 2.929774855 0.95889935 1 13.85517433 -6.99438953 22.61002373 2.095665057 1.851219821 0 0.700697155 226.1472268 911342.3909 0.241835443 0.212389549 1.01E-07 6.99438953 -0.244445236 FKAEAPLPS(ph)PK ddPTM_A459_MK2206_30min_R1 1 FKAEAPLPSPK 11 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FKAEAPLPS(1)PK 109.44 0.044593 205480000 8045.6 10416 9856.7 7740.3 4728.4 4410.7 4284.4 5083.1 5678.4 5063 TRUE FALSE 7361.279471 9737.916507 9187.654666 8336.459247 4540.057815 4660.430022 3998.595493 5038.658993 6268.69 5690.242664 1.293667055 1.711335892 1.61463319 1.465044593 0.797867171 0.819021314 0.702710891 0.885491057 1.101656005 1 12.47427446 -6.21186251 5.080122453 0.865750522 1.550589658 0.82414895 0.143934702 0.080453152 4.789926547 0.043926859 0.056380338 6.14E-07 6.21186251 0.684839136 FKAEAPLPS(ph)PK ddPTM_A459_MK2206_30min_R2 1 FKAEAPLPSPK 11 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FKAEAPLPS(1)PK 63.681 0.047118 714690000 2263100 1827700 2018400 1474400 1540800 938110 1566300 1085700 1033900 1419900 TRUE FALSE 2436364.676 1736939.076 2085692.449 1353936.804 1480300.45 973810.4334 1360642.929 1227604.718 1123826.753 1373568.779 1.773747855 1.264544668 1.518447769 0.985707322 1.077703914 0.708963721 0.990589586 0.893733708 0.818180181 1 20.38949772 -5.518569006 0.870957741 0.875972144 1.723704336 0.765871998 0.150421233 0.438839402 0.516720162 0.058026318 0.290257703 3.03E-06 5.518569006 0.847732192 FKDDDGDEEDENGVGDAELR ddPTM_A459_MK2206_30min_R2 2 FKDDDGDEEDENGVGDAELR 20 1 Q6NZY4 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 0 ; 116.6 0.00075007 10816800 54374 61404 65673 59035 57083 50411 70787 48498 44289 59985 FALSE TRUE 58536.91525 58354.76665 67862.50504 54211.65166 54841.6346 52329.42593 61492.58187 54836.85512 48141.17716 58027.69436 1.00877548 1.005636486 1.169484774 0.934237561 0.945094152 0.901800882 1.059710928 0.945011787 0.82962416 1 15.82445399 -5.818900316 24.99971061 0.945752126 1.055734526 0.365254485 0.070096066 88.27744168 38406.54224 0.019883011 0.029491292 1.52E-06 5.818900316 0.109982399 FKIDSNIS(ph)PK ddPTM_A459_MK2206_30min_R1 2 FKIDSNISPK 10 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 FKIDS(0.003)NIS(0.997)PK;FKIDS(0.001)NIS(0.999)PK 83.53 0.021952 729770000 21507.7 26761 27871 25031 14946.4 15709.3 18948 20867 21762 19762.5 TRUE FALSE 19678.35717 25018.85404 25979.19417 26958.89196 14351.05324 16598.74699 17684.01349 20684.56202 24024.23778 22210.8277 0.885980362 1.126426011 1.169663487 1.213772504 0.646128701 0.747326809 0.796188856 0.931282809 1.081645317 1 14.43897554 -6.246803005 24.9891203 0.854125788 1.105972613 0.388117721 0.141956138 846.9263814 1445982.534 0.044440644 0.057123979 5.66E-07 6.246803005 0.251846825 FKIPSLGWS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 FKIPSLGWSPSK 12 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 FKIPS(0.001)LGWS(0.929)PS(0.071)K 68.481 0.038029 28090000 154470 154650 162360 141510 152870 120820 191850 143070 153610 193370 TRUE FALSE 166296.342 146970.3059 167773.0014 129948.1803 146867.5557 125417.8898 166659.8645 161769.7402 166970.7201 187060.3527 0.888998334 0.785683891 0.896892361 0.694685851 0.785134603 0.670467515 0.890941678 0.864799718 0.892603471 1 17.51314429 -8.299723173 1.061358936 0.991370065 0.792502163 0.430028075 0.072784227 0.469090596 1.098289859 0.069427865 0.023325654 5.02E-09 8.299723173 -0.198867902 FKIPSLGWSPS(ph)K ddPTM_A459_MK2206_30min_R1 2 FKIPSLGWSPSK 12 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 FKIPSLGWS(0.066)PS(0.934)K;FKIPSLGWS(0.048)PS(0.952)K 105.28 0.005164 147850000 29294 30033 28933 26209 23939 22614 26131 27288 28020 26094 TRUE FALSE 26802.39147 28077.84624 26969.10857 28227.62172 22985.45894 23894.38514 24387.84867 27049.42389 30932.77927 29326.72172 0.913923886 0.957415101 0.919608705 0.962522235 0.78377185 0.814764956 0.831591369 0.922347344 1.054764306 1 14.83992819 -8.123080676 4.473577666 1.025191119 0.883765226 0.492543797 0.057479196 0.215343795 6.660064623 0.04743629 0.016755101 7.53E-09 8.123080676 -0.141425892 FKMPFLSISS(ph)PK ddPTM_A459_MK2206_30min_R1 2 FKMPFLSISSPK 12 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FKMPFLSIS(0.04)S(0.96)PK;FKMPFLSIS(0.024)S(0.976)PK 111.07 0.0038231 43179000 26185 28244 26963 27293 18657.2 15244.6 16636.8 20499 16115.7 13824.8 TRUE FALSE 23957.82825 26405.31047 25132.82668 29395.11159 17914.04422 16107.73608 15526.98943 20319.7794 17790.98469 15537.5206 1.541933805 1.699454575 1.617557095 1.891879171 1.152953852 1.036699258 0.99932221 1.30778777 1.145033699 1 13.92346868 -6.312281028 8.382497141 1.112345032 1.683199463 0.852524233 0.118319596 0.13152899 20.42702158 0.037162627 0.042262365 4.87E-07 6.312281028 0.570854431 FKMPS(ph)FGVSAPGK ddPTM_A459_MK2206_30min_R1 1 FKMPSFGVSAPGK 13 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 FKMPS(0.973)FGVS(0.027)APGK 91.065 0.011157 12096000 8267.7 7432.1 7246.7 8241.7 6075.8 5857.2 5792.2 5938.7 5225.5 4275.5 TRUE FALSE 7564.4887 6948.268939 6754.814194 8876.477162 5833.78802 6188.829602 5405.812906 5886.778572 5768.709425 4805.181218 1.574235883 1.445995192 1.405735577 1.847272092 1.214062021 1.287949262 1.124996678 1.225089815 1.200518599 1 12.23037513 -6.406189313 9.333222526 1.1870559 1.547735013 0.682328817 0.131004928 0.221537817 16.45393256 0.039831325 0.045150884 3.92E-07 6.406189313 0.360679113 FKMPSFGMLS(ph)PGK ddPTM_A459_MK2206_30min_R1 2 FKMPSFGMLSPGK 13 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 FKMPSFGMLS(1)PGK;FKMPSFGMLS(1)PGK 77.13 0.024051 19050100 7602.3 9094.6 8412.4 8087.4 6781.1 5993.7 6213.1 7963.1 6750 4750.8 TRUE FALSE 6955.684464 8502.539887 7841.389726 8710.292949 6510.994428 6333.058114 5798.635435 7893.479456 7451.686655 5339.364971 1.302717552 1.592425304 1.468599687 1.631334999 1.21943236 1.18610699 1.086015934 1.478355479 1.395612905 1 12.38245245 -6.276680098 24.33395014 1.242352449 1.503304115 0.430307691 0.152257932 582.8861124 930657.4662 0.047917911 0.054551116 5.29E-07 6.276680098 0.260951666 FLCADYAEQDELDYHR ddPTM_A459_MK2206_30min_R1 1 FLCADYAEQDELDYHR 16 0 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 0 91.616 0.016072 2671100 1204.7 1265.4 1454.2 1280.8 1277.4 1267.7 1201.5 1070 1270.9 1055.1 FALSE TRUE 1102.233939 1183.02223 1355.492956 1379.447438 1226.518453 1339.476078 1121.350127 1060.645103 1403.014603 1185.813754 0.929516912 0.9976459 1.143090938 1.163291819 1.034326385 1.129583861 0.945637647 0.894444933 1.183166074 1 10.21166172 -7.265597783 24.94864307 0.997015912 1.069578294 0.083855905 0.09573008 853.6252259 5121358.785 0.040177591 0.028132327 5.43E-08 7.265597783 0.072562382 FLDT(ph)MSMHMAISGLSSFQRSLWIAAK ddPTM_A459_MK2206_30min_R1 1 FLDTMSMHMAISGLSSFQRSLWIAAK 26 1 A0A590UJP1;A0A1B0GTQ6;A0A1B0GVT8;H0YD36;P54098 A0A590UJP1 POLG DNA polymerase subunit gamma-1 1 FLDT(0.5)MS(0.5)MHMAIS(0.001)GLSSFQRSLWIAAK 45.011 0.035204 11899000 255.76 711.84 946.46 548.65 260.43 150.04 304.5 408.1 744.52 878.49 TRUE FALSE 234.006269 665.4990866 882.2169322 590.9071181 250.0565216 158.5351351 284.1873606 404.5320247 821.9155183 987.3239735 0.237010622 0.674043277 0.893543513 0.598493639 0.25326694 0.160570531 0.287835977 0.409725719 0.832467904 1 9.947379748 -8.392147977 3.551607794 0.991269958 0.446989035 0.445310547 0.216085007 0.245558914 5.334359269 0.236683897 0.062957478 4.05E-09 8.392147977 -0.544280923 FLEDDT(ph)SDPTYTSALGGK ddPTM_A459_MK2206_30min_R1 1 FLEDDTSDPTYTSALGGK 18 0 B1AKC9;P29323-2;P29323-3;P29323 B1AKC9 EPHB2 Receptor protein-tyrosine kinase;Ephrin type-B receptor 2 1 FLEDDT(0.912)S(0.088)DPTYTSALGGK 185.02 6.83E-10 3084400 1595.4 1145.7 1156.4 1083.3 1704.2 1701.6 1700.9 1445.5 1983.7 2098.7 TRUE FALSE 1459.702852 1071.114722 1077.90679 1166.735954 1636.318105 1797.943122 1587.436064 1432.862146 2189.912714 2358.7028 0.61885832 0.454111778 0.456991355 0.494651532 0.693736449 0.76225929 0.673012329 0.607478884 0.928439443 1 11.20377793 -7.887338829 0.326872035 1.036231102 0.450890047 0.723140962 0.093240658 0.779617958 0.277431782 0.160597057 0.150516938 1.30E-08 7.887338829 -0.585341054 FLEDDTS(ph)DPTYTSALGGK ddPTM_A459_MK2206_30min_R1 1 FLEDDTSDPTYTSALGGK 18 0 B1AKC9;P29323-2;P29323-3;P29323 B1AKC9 EPHB2 Receptor protein-tyrosine kinase;Ephrin type-B receptor 2 1 FLEDDT(0.09)S(0.909)DPT(0.001)YTSALGGK 151.04 0.00012241 0 1080 792.93 659.56 690.3 732.29 868.79 825.49 1064.8 1139.3 697.17 TRUE FALSE 988.1403287 741.3101129 614.7909048 743.4670256 703.1213387 917.980139 770.4230683 1055.490566 1257.734312 783.540683 1.261121918 0.946102901 0.78463176 0.948855678 0.897364175 1.17157942 0.98325854 1.347078191 1.605193373 1 9.613864374 -7.766238856 8.797795644 1.3579651 0.989325207 0.3718293 0.18717584 0.110518603 84.55871801 0.094879063 0.049135079 1.71E-08 7.766238856 -0.368639893 FLEES(ph)VSMSPEER ddPTM_A459_MK2206_30min_R1 1 FLEESVSMSPEER 13 0 A0A087WTB8;Q5TBK7;P15374 A0A087WTB8 UCHL3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L3 1 FLEES(0.598)VS(0.058)MS(0.344)PEER 166.62 0.00032724 8329100 1943.9 1853.2 1773 1636.6 2180.9 1987.2 2025.7 1903.2 1679.2 1942.1 TRUE FALSE 1778.561097 1732.556343 1652.6537 1762.651216 2094.030135 2099.713547 1890.569249 1886.560523 1853.758849 2182.70201 0.814843753 0.793766779 0.757159563 0.807554676 0.95937518 0.961979023 0.866160035 0.864323446 0.849295433 1 11.09189947 -6.144796284 5.820495769 0.909468566 0.788358582 0.615548416 0.047724908 0.173609457 7.676162084 0.014911296 0.019405446 7.16E-07 6.144796284 -0.121109984 FLEESVSMS(ph)PEER ddPTM_A459_MK2206_30min_R1 2 FLEESVSMSPEER 13 0 A0A087WTB8;Q5TBK7;P15374 A0A087WTB8 UCHL3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L3 1 FLEES(0.001)VS(0.001)MS(0.999)PEER;FLEESVSMS(1)PEER 203.87 4.92E-05 9639700 2647.88 2140.82 1894.76 1666.1 2454.84 2065.45 2423.24 2319.32 1739.6 1717.43 TRUE FALSE 2422.663901 2001.452229 1766.14897 1794.423311 2357.058525 2182.393994 2261.590081 2299.04243 1920.437645 1930.198194 1.255137378 1.036915398 0.91500913 0.929657543 1.221148446 1.130657981 1.17168801 1.191091379 0.99494324 1 10.91453328 -6.263474828 24.99951648 1.131101224 1.025863065 0.112923855 0.111046975 349.3011372 4290130.245 0.034651708 0.041335893 5.45E-07 6.263474828 -0.105238158 FLEESVSMS(ph)PEER ddPTM_A459_MK2206_30min_R2 1 FLEESVSMSPEER 13 0 A0A087WTB8;Q5TBK7;P15374 A0A087WTB8 UCHL3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L3 1 FLEES(0.011)VS(0.011)MS(0.978)PEER 126.09 0.0020632 1813700 8145.2 11428 10261 13125 13097 14314 11780 10409 12709 9849.1 TRUE FALSE 8768.802775 10860.50214 10603.09662 12052.64552 12582.74597 14858.7293 10233.27185 11769.49204 13814.40585 9527.724674 0.920345946 1.139884129 1.112867655 1.265007746 1.320645422 1.55952547 1.074052011 1.235288848 1.449916567 1 13.21791601 -4.914335014 1.032061368 1.28650263 0.816875578 0.307957359 0.15705291 1.835372635 1.841593939 0.051555602 0.908037856 1.22E-05 4.914335014 -0.469627052 FLENGS(ph)QEDLLHGNPGSTYLASNSTSAPNWK ddPTM_A459_MK2206_30min_R2 1 FLENGSQEDLLHGNPGSTYLASNSTSAPNWK 31 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 FLENGS(0.643)QEDLLHGNPGS(0.196)T(0.082)Y(0.069)LAS(0.007)NS(0.002)T(0.001)S(0.001)APNWK 68.483 0.00017269 14561000 39317 41754 36086 52677 44207 56531 60594 51649 48922 49850 TRUE FALSE 42327.13975 39680.55708 37289.08923 48373.12059 42471.21106 58682.32682 52637.93501 58399.70164 53177.14713 48223.39858 0.877730334 0.822848622 0.773257181 1.003104759 0.880717915 1.216884926 1.091543453 1.211024178 1.102724998 1 15.55744571 -6.505256131 1.703697041 1.135208933 0.844340624 0.656203897 0.087450378 0.200806808 1.178559991 0.03198283 0.035448143 3.12E-07 6.505256131 -0.290868308 FLENGSQEDLLHGNPGS(ph)TYLASNSTSAPNWK ddPTM_A459_MK2206_30min_R1 2 FLENGSQEDLLHGNPGSTYLASNSTSAPNWK 31 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 FLENGSQEDLLHGNPGS(0.733)T(0.165)Y(0.089)LAS(0.012)NS(0.001)TSAPNWK;FLENGS(0.351)QEDLLHGNPGS(0.453)T(0.147)Y(0.041)LAS(0.008)NSTSAPNWK 145.65 6.71E-20 22136100 22700 13295.5 14546.2 10650.5 17303.2 16691.4 20029.7 18013.8 15689.5 15050 TRUE FALSE 20769.2458 12429.96053 13558.84447 11470.80336 16613.9769 17636.45264 18693.55526 17856.30725 17320.47967 16914.50762 1.227895382 0.734869782 0.801610356 0.678163598 0.98223237 1.042682 1.105178801 1.055679991 1.024001411 1 14.04597356 -6.49904281 13.25125273 1.048259971 0.845266988 0.278899219 0.139522374 2.63256436 1462.202019 0.043479031 0.048336683 3.17E-07 6.49904281 -0.202992983 FLENGSQEDLLHGNPGS(ph)TYLASNSTSAPNWK ddPTM_A459_MK2206_30min_R2 1 FLENGSQEDLLHGNPGSTYLASNSTSAPNWK 31 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 FLENGS(0.191)QEDLLHGNPGS(0.693)T(0.084)Y(0.03)LAS(0.001)NSTSAPNWK 77.488 1.61E-05 15325000 30753 25641 24159 31017 27460 39789 36441 30159 31329 37957 TRUE FALSE 33107.47333 24367.70523 24964.449 28482.81188 26381.78242 41303.19828 31656.25293 34100.88485 34053.93979 36718.4662 0.901657306 0.66363625 0.679888121 0.775708106 0.718488138 1.124861754 0.862134403 0.928712127 0.927433614 1 15.16421818 -6.733335267 24.99919051 0.957517066 0.740964689 0.608335693 0.088253134 147.1083957 130855.6243 0.028451226 0.028445614 1.85E-07 6.733335267 -0.216552377 FLESAAADFS(ph)DEDEDDDVDGREK ddPTM_A459_MK2206_30min_R1 2 FLESAAADFSDEDEDDDVDGREK 23 1 O43815-2;O43815 O43815-2 STRN Striatin 1 FLESAAADFS(1)DEDEDDDVDGREK;FLES(0.008)AAADFS(0.992)DEDEDDDVDGREK 155.06 1.97E-09 11584400 2112.66 1540.07 1958.07 2335.5 2036.45 1354.28 1434.63 2148.89 1573.1 1040.74 TRUE FALSE 1932.967173 1439.811163 1825.161664 2515.380615 1955.333884 1430.958163 1338.92845 2130.102481 1736.629374 1169.674728 1.652568125 1.230950048 1.560401041 2.15049582 1.671690289 1.223381277 1.144701529 1.821106697 1.484711375 1 10.19189168 -6.743290533 24.56750878 1.374219433 1.65223137 0.221842605 0.293588925 388.2730274 525591.2448 0.103887751 0.103676731 1.81E-07 6.743290533 0.278011937 FLFERVEGIS(ph)RATIIDLDAHQGNGHER ddPTM_A459_MK2206_30min_R2 2 FLFERVEGISRATIIDLDAHQGNGHER 27 2 C9JEC8;B5MCV5;B5MCQ6;E7ETT9;Q96DB2-2;Q96DB2 C9JEC8 HDAC11 Histone deacetylase 11 1 FLFERVEGIS(0.975)RAT(0.025)IIDLDAHQGNGHER;FLFERVEGIS(0.99)RAT(0.01)IIDLDAHQGNGHER 44.258 0.024244 12699900 77844 44785 55715 37251 38187 22491.2 45713 38613 29561 60104 TRUE FALSE 83803.79649 42561.04202 57572.51029 34207.47414 36687.58651 23347.11838 39710.82819 43659.85168 32132.16235 58142.8114 1.441344071 0.73200867 0.990191374 0.588335399 0.630990928 0.401547806 0.682987754 0.750907131 0.552642048 1 15.82731321 -2.05729672 0.980531976 0.652839422 200 0.604979148 0.177355867 287.0051178 1.42151109 0.054782125 127169.6753 0.008764018 2.05729672 199.3471606 FLIATGERPR ddPTM_A459_MK2206_30min_R1 2 FLIATGERPR 10 1 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;Q16881-7;E2QRB9;E9PKD3 Q16881 TXNRD1 "Thioredoxin reductase 1, cytoplasmic" 0 ; 125.71 0.010086 54556000 8626.9 9058.3 9942 8168.9 9553.7 8522.6 8820 8143.6 7406.2 6408.1 FALSE TRUE 7893.136853 8468.603024 9267.16474 8798.070093 9173.155899 9005.142247 8231.633893 8072.401364 8176.100993 7201.983807 1.095967037 1.175870878 1.286751677 1.221617589 1.27369849 1.250369688 1.142967565 1.120858028 1.135256787 1 12.81417864 -8.353708935 0.848282139 1.008064625 1.218593041 0.565243257 0.056055365 0.451915047 0.716528947 0.057292219 0.021086072 4.43E-09 8.353708935 0.210528417 FLIATGERPR ddPTM_A459_MK2206_30min_R2 1 FLIATGERPR 10 1 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;Q16881-7;E2QRB9;E9PKD3 Q16881 TXNRD1 "Thioredoxin reductase 1, cytoplasmic" 0 139.98 0.0041376 14813000 37227 47547 41472 45905 46183 47668 46911 38862 37947 41399 FALSE TRUE 40077.12774 45185.88512 42854.65578 42154.41466 44369.62337 49482.03914 40751.52935 43941.39683 41247.56147 40048.15402 1.000723472 1.128288837 1.07007818 1.052593202 1.10790683 1.235563545 1.01756324 1.097214039 1.029949132 1 15.28944812 -8.394174109 1.570733525 0.999203881 1.093698005 0.187835251 0.061903638 0.624850345 3.226786038 0.058697891 0.017398591 4.03E-09 8.394174109 0.094494124 FLIVAHDDGR ddPTM_A459_MK2206_30min_R1 2 FLIVAHDDGR 10 0 Q16658 Q16658 FSCN1 Fascin 0 ; 99.973 0.025181 36528000 14169.2 13256.3 14088.4 12511.8 14557.5 14187.7 14371.2 13590.1 11940.2 11052.1 FALSE TRUE 12964.03513 12393.31246 13132.11866 13475.461 13977.64395 14990.99531 13412.52347 13471.28319 13181.42652 12421.31759 1.04369243 0.997745398 1.057224289 1.084865668 1.125294789 1.206876421 1.079798771 1.084529326 1.061193905 1 13.60053059 -5.640084304 2.604055287 1.101901329 1.021171592 0.225454773 0.050713252 0.357293611 4.874420877 0.014971061 0.030068109 2.29E-06 5.640084304 -0.080729737 FLIVAHDDGR ddPTM_A459_MK2206_30min_R2 2 FLIVAHDDGR 10 0 Q16658 Q16658 FSCN1 Fascin 0 ; 109.79 0.013846 36489000 152353 184305 164213 166716 165559 181686 173713 139578 154153 146430 FALSE TRUE 164017.2628 175152.6817 169687.7795 153094.7695 159058.3218 188600.188 150904.2744 157821.3238 167560.9493 141652.0011 1.157888781 1.236499875 1.197920101 1.080780845 1.122880867 1.331433277 1.065316926 1.114148213 1.182905628 1 17.11199146 -14.52287875 0.190259438 0.281658901 1.195268547 0.318097304 0.074004495 171.3449473 1.671608329 46.53502419 0.204402161 3.00E-15 14.52287875 0.913609646 FLLGPPQGGS(ph)PR ddPTM_A459_MK2206_30min_R2 1 FLLGPPQGGSPR 12 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 FLLGPPQGGS(1)PR 107.53 0.0084425 5799800 19421 21691 16491 18893 18859 17971 22879 18783 14295 17953 TRUE FALSE 20907.88669 20613.85648 17040.80171 17349.38146 18118.5009 18654.899 19874.95982 21238.00259 15538.35326 17367.19508 1.203872392 1.186942185 0.981206328 0.998974295 1.043260055 1.074145762 1.144396647 1.222880407 0.894695614 1 14.08407715 -5.173021853 7.443473293 1.055921943 1.197926536 0.322221114 0.086166326 0.355742145 26.23705775 0.022520827 0.060471833 6.71E-06 5.173021853 0.142004594 FLLSLPEHR ddPTM_A459_MK2206_30min_R2 1 FLLSLPEHR 9 0 Q15008-4;Q15008;C9J7B7 Q15008-4 PSMD6 26S proteasome non-ATPase regulatory subunit 6 0 119.62 0.0096106 2251100 13858 15196 11424 15902 18576 15417 17341 11469 14690 14299 FALSE TRUE 14918.97913 14441.38874 11804.87046 14602.75573 17846.6129 16003.70474 15064.10587 12968.03768 15967.70965 13832.4248 1.078551255 1.044024381 0.85342018 1.055690231 1.290201332 1.156970305 1.089043034 0.93751008 1.154368079 1 13.75576646 -4.399425972 17.13238661 1.066149783 2.696967217 0.001148233 0.115555536 1568.728861 220122.2452 0.030061342 1111.784496 3.99E-05 4.399425972 1.630817433 FLMECRNS(ph)PVTK ddPTM_A459_MK2206_30min_R2 1 FLMECRNSPVTK 12 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 FLMECRNS(0.998)PVT(0.002)K 66.215 0.04178 81131000 21832 65553 42765 62870 88135 98810 113830 74591 166370 92178 TRUE FALSE 23503.47471 62297.73334 44190.76376 57733.31989 84674.37706 102570.2838 98883.98427 84340.29981 180840.5619 89170.23941 0.263579809 0.698638175 0.495577494 0.647450543 0.949581134 1.15027485 1.10893483 0.945834623 2.028037191 1 16.44427467 -6.4712322 0.702409157 1.353285317 0.403573978 0.590347916 0.290351774 0.53268175 0.583270407 0.187595121 0.264023483 3.38E-07 6.4712322 -0.949711339 FLMPEAYPSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 FLMPEAYPSSPR 12 0 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 FLMPEAYPS(0.142)S(0.858)PR 143.76 0.00079925 3078700 19146 20501 15230 21562 17729 20971 25204 16403 17571 20195 TRUE FALSE 20611.83248 19482.95015 15737.7606 19800.31563 17032.87038 21769.0661 21894.68452 18546.92842 19099.29382 19536.0388 1.055067135 0.997282527 0.805575826 1.013527657 0.871869193 1.114302972 1.120733059 0.949369962 0.977644138 1 14.25385035 -6.759701018 24.9999542 1.034765831 0.947019622 0.20048029 0.083521514 79.9190376 1149347.122 0.029373117 0.027938318 1.74E-07 6.759701018 -0.087746209 FLNRS(ph)PEESFDIK ddPTM_A459_MK2206_30min_R2 1 FLNRSPEESFDIK 13 1 F5H7T0;F6RJM5;Q96S38-2;Q96S38 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 FLNRS(0.99)PEES(0.01)FDIK 66.022 0.040783 1384200 5258.2 6649.7 8415 8641.9 7451.6 6858.7 8470.3 6168 7398.4 7893.3 TRUE FALSE 5660.771835 6319.485568 8695.5519 7935.829126 7159.012743 7119.712635 7358.139435 6974.178778 8041.899459 7635.742267 0.741351873 0.827619025 1.138795889 1.039300286 0.937566053 0.932419192 0.96364429 0.913359636 1.053191579 1 12.89855269 -5.053288068 7.112149829 0.990061571 0.761472979 0.643485752 0.064597986 0.136612028 15.8444757 0.017441533 0.048192729 8.85E-06 5.053288068 -0.228588592 FLPIS(ph)STPQPER ddPTM_A459_MK2206_30min_R2 3 FLPISSTPQPER 12 0 J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-5;Q08AE8-2;Q08AE8 J3KNG6 SPIRE1 Protein spire homolog 1 1 FLPIS(0.372)S(0.372)T(0.256)PQPER;FLPIS(0.333)S(0.333)T(0.333)PQPER;FLPIS(0.369)S(0.369)T(0.263)PQPER 100.04 0.013816 28617300 154436 177976 153853 182299 173933 177336 196112 152802 156969 176549 TRUE FALSE 166259.7389 169137.9706 158982.3822 167404.5886 167103.5165 184084.6457 170362.2588 172773.746 170621.8799 170788.2206 0.973484813 0.990337449 0.930874399 0.980188142 0.978425303 1.077853292 0.997505907 1.011625658 0.999026041 1 17.38184895 -6.547865071 24.97954592 1.017969061 0.969029955 0.447259072 0.026040415 205.3000846 205242.9318 0.008523557 0.008523887 2.83E-07 6.547865071 -0.048939105 FLPIS(ph)STPQPERR ddPTM_A459_MK2206_30min_R2 1 FLPISSTPQPERR 13 1 J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-5;Q08AE8-2;Q08AE8 J3KNG6 SPIRE1 Protein spire homolog 1 1 FLPIS(0.37)S(0.315)T(0.315)PQPERR 70.98 0.030415 3138000 30694 36840 33153 36170 39375 29386 38876 26815 28194 33035 TRUE FALSE 33043.95624 35010.57917 34258.30447 33214.7953 37828.93966 30504.30482 33771.5345 30319.81257 30646.26316 31957.07066 1.034010801 1.095550326 1.072010161 1.039356694 1.183742404 0.954540081 1.056778165 0.948766954 0.958982239 1 14.96384755 -6.793667542 24.99999884 0.985171688 1.082273934 0.5254632 0.048005808 162.2070799 125826.0048 0.016482848 0.014537577 1.61E-07 6.793667542 0.097102246 FLPISST(ph)PQPER ddPTM_A459_MK2206_30min_R1 4 FLPISSTPQPER 12 0 J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-5;Q08AE8-2;Q08AE8 J3KNG6 SPIRE1 Protein spire homolog 1 1 FLPIS(0.168)S(0.171)T(0.661)PQPER;FLPIS(0.003)S(0.02)T(0.977)PQPER;FLPIS(0.054)S(0.314)T(0.633)PQPER;FLPIS(0.038)S(0.217)T(0.745)PQPER 149.41 0.001349 42019500 14301.4 15519.9 13774.3 13502.6 15864.3 13612 14404.2 14302.2 12054 11300.3 TRUE FALSE 13084.99083 14509.55169 12839.33889 14542.57259 15232.39134 14382.69968 13443.3221 14177.15737 13307.05644 12700.26648 1.030292621 1.142460413 1.010950354 1.14506043 1.199375727 1.132472276 1.058507089 1.116288182 1.047777734 1 13.63257115 -8.496450892 2.17035039 0.999523154 1.107220593 0.276465636 0.054400253 0.412882518 4.414163976 0.053352618 0.014786359 3.19E-09 8.496450892 0.107697438 FLPISST(ph)PQPERR ddPTM_A459_MK2206_30min_R2 1 FLPISSTPQPERR 13 1 J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-5;Q08AE8-2;Q08AE8 J3KNG6 SPIRE1 Protein spire homolog 1 1 FLPIS(0.046)S(0.208)T(0.746)PQPERR 84.859 0.035668 4429400 12116 15650 13497 13668 16989 13749 13646 12169 14384 11841 TRUE FALSE 13043.61028 14872.84376 13946.98324 12551.28068 16321.9265 14272.22783 11854.26381 13759.53008 15635.09432 11454.62914 1.138719562 1.298413382 1.21758488 1.095738721 1.424919681 1.245979041 1.034888486 1.201220041 1.36495858 1 13.48364313 -10.97873274 3.652307994 0.997709849 1.223117981 0.264479469 0.112393841 83220037.44 37909121.91 1684045.186 0.028238102 1.05E-11 10.97873274 0.225408131 FLPLFDR ddPTM_A459_MK2206_30min_R2 2 FLPLFDR 7 0 P61604;B8ZZL8;S4R3N1 P61604 HSPE1;HSPE1-MOB4 "10 kDa heat shock protein, mitochondrial" 0 ; 143.97 0.046034 13180900 26894 33637 35534 37923 29196 37612 30682 22417.2 38564 31491 FALSE TRUE 28953.02532 31966.63549 36718.68582 34824.56959 28049.61834 39043.35102 26653.41654 25347.20501 41918.22701 30463.45125 0.950418424 1.049343859 1.205335716 1.143159037 0.920762986 1.281645691 0.874930957 0.832052967 1.376017007 1 14.89479178 -7.293520575 24.9969524 1.006754712 1.089572808 0.03787264 0.169393656 2370.995621 1847417.544 0.069688913 0.046987801 5.09E-08 7.293520575 0.082818097 FLPLNIRNS(ph)PFTR ddPTM_A459_MK2206_30min_R1 2 FLPLNIRNSPFTR 13 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2;H3BSK8 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 FLPLNIRNS(0.998)PFT(0.002)R;FLPLNIRNS(0.95)PFT(0.05)R 87.719 0.013615 59441000 7509.5 6463.8 6979.3 7477.2 8967.4 6864.8 6707 6851.6 4718.4 2513 TRUE FALSE 6870.777591 6043.005445 6505.564561 8053.09524 8610.209469 7253.479044 6259.588268 6791.697184 5208.894565 2824.329412 2.432711128 2.139624868 2.303401485 2.85133002 3.048585421 2.568212834 2.216309557 2.404711417 1.844294275 1 11.46369265 -8.616624576 1.140137407 0.999024758 2.539088529 0.769748572 0.25803103 0.323828568 0.897067477 0.281005355 0.088564055 2.42E-09 8.616624576 1.540063771 FLPS(ph)PVVIK ddPTM_A459_MK2206_30min_R2 2 FLPSPVVIK 9 0 H7C399;A0A087WTG3;Q13618-3;Q13618-2;Q13618 H7C399 CUL3 Cullin-3 1 FLPS(1)PVVIK;FLPS(1)PVVIK 118.28 0.007265 15748100 122817 135157 112982 144059 110637 120235 122815 122815 98688 130303 TRUE FALSE 132219.964 128445.2999 116748.7635 132288.9189 106292.8355 124810.6272 106689.243 138867.3422 107271.7039 126051.2238 1.04893836 1.018992883 0.926200952 1.049485399 0.843251119 0.990157996 0.846395932 1.101673891 0.851016758 1 16.9436506 -4.821575933 1.133785642 0.94862036 1.100036166 0.133788392 0.083740382 3.070727016 3.443061625 0.024431498 0.548749935 1.51E-05 4.821575933 0.151415806 FLPSELRDEH ddPTM_A459_MK2206_30min_R1 1 FLPSELRDEH 10 1 Q9Y490 Q9Y490 TLN1 Talin-1 0 131.12 0.0075077 2912500 1278.7 990.15 1099.8 1400.9 1386.7 1269.4 1210.7 1227 632.47 464.19 FALSE TRUE 1169.93985 925.691055 1025.14864 1508.797561 1331.464803 1341.272331 1129.936412 1216.272468 698.2175198 521.6973617 2.242564246 1.77438324 1.965025541 2.892093523 2.552178524 2.570977792 2.16588485 2.33137554 1.338357391 1 9.027069327 -8.356546682 3.147762654 1.010732317 2.318882485 0.701573909 0.30137088 0.148173427 2.672090144 0.318669939 0.086473135 4.40E-09 8.356546682 1.308150168 up FLQDYFDGNLKR ddPTM_A459_MK2206_30min_R1 2 FLQDYFDGNLKR 12 1 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 ; 101.72 0.016605 12474200 3198.6 3692.6 3734.6 3812 3827.6 3243.1 3303.9 3530.1 2892.6 2863.7 FALSE TRUE 2926.542273 3452.211069 3481.105757 4105.600901 3675.138587 3426.721519 3083.502859 3499.236708 3193.296121 3218.476776 0.909294203 1.072622644 1.081600397 1.275634776 1.141887558 1.064702888 0.958062796 1.087233792 0.99217622 1 11.65216234 -7.00427774 22.0457521 1.015886977 1.103978387 0.170351777 0.089183804 75.19542502 387535.0159 0.034118463 0.029263473 9.90E-08 7.00427774 0.08809141 FLQEHGSDS(ph)FLAEHK ddPTM_A459_MK2206_30min_R1 1 FLQEHGSDSFLAEHK 15 0 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 1 FLQEHGSDS(1)FLAEHK 101.17 0.0047077 5247700 1883.7 1372.1 1391.5 1182.6 1940.6 1519.3 1543.2 1853.2 1325.8 1085.9 TRUE FALSE 1723.481423 1282.776041 1297.048857 1273.684057 1863.301793 1605.321453 1440.255944 1836.997668 1463.621654 1220.42949 1.412192541 1.051085746 1.062780658 1.043635923 1.526759069 1.315374191 1.180122207 1.505205899 1.199267689 1 10.25317323 -6.228924848 24.99901694 1.309044573 1.130210789 0.133417726 0.175475353 1085.806757 834829.6719 0.049916138 0.064436776 5.90E-07 6.228924848 -0.178833784 FLQEHGSDS(ph)FLAEHK ddPTM_A459_MK2206_30min_R2 1 FLQEHGSDSFLAEHK 15 0 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 1 FLQEHGS(0.001)DS(0.999)FLAEHK 88.176 0.011838 5667900 17591 25128 20845 27298 28722 27673 30647 22314 16952 23348 TRUE FALSE 18937.78049 23880.18006 21539.9619 25067.66608 27594.22996 28726.11541 26623.01209 25230.51642 18426.45432 22586.15667 0.838468481 1.057292766 0.953679823 1.1098686 1.221731982 1.271846106 1.178731401 1.117078783 0.815829563 1 14.46315118 -5.780460385 6.382858776 1.12286789 0.960005525 0.212195016 0.129951152 0.237835151 35.33645095 0.03797572 0.059322404 1.66E-06 5.780460385 -0.162862365 FLS(ph)LEYSPAGK ddPTM_A459_MK2206_30min_R2 2 FLSLEYSPAGK 11 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 FLS(1)LEYSPAGK;FLS(1)LEYSPAGK 128.85 0.0026981 6353300 40189 42645 38190 38098 35088 28959 32620 25613 30867 32032 TRUE FALSE 43265.90074 40527.31131 39463.23554 34985.27153 33710.26882 30061.05504 28336.95482 28960.70704 33551.75587 30986.79846 1.396268827 1.307889596 1.273549947 1.129037954 1.087891311 0.970124586 0.914484755 0.934614367 1.082775812 1 14.91936608 -5.875559708 1.011606363 0.97078062 1.383679575 0.904698829 0.048821061 0.170838709 0.344303312 0.020396502 0.051491361 1.33E-06 5.875559708 0.412898955 FLSHS(ph)TDSLNK ddPTM_A459_MK2206_30min_R1 2 FLSHSTDSLNK 11 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36 Q12802-4 AKAP13 A-kinase anchor protein 13 1 FLS(0.002)HS(0.879)T(0.119)DSLNK;FLS(0.12)HS(0.864)T(0.015)DSLNK 120.6 0.0030976 78347000 13872.7 9786.7 11448.8 7877.8 15541.6 13909.5 13559.6 12206.6 8766 8457.3 TRUE FALSE 12692.75402 9149.584051 10671.68735 8484.549521 14922.54516 14697.04387 12655.06382 12099.87898 9677.257069 9505.054173 1.33536893 0.962601989 1.122738194 0.892635577 1.569958981 1.546234624 1.331403651 1.272994216 1.018116982 1 13.21447913 -4.461630665 22.10080568 1.21129377 4.136460512 0.028493393 0.226330401 1654.391276 636624.959 0.05867024 15663.64929 3.45E-05 4.461630665 2.925166742 FLSHS(ph)TDSLNK ddPTM_A459_MK2206_30min_R2 3 FLSHSTDSLNK 11 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36 Q12802-4 AKAP13 A-kinase anchor protein 13 1 FLSHS(0.982)T(0.018)DSLNK;FLS(0.001)HS(0.973)T(0.027)DSLNK;FLSHS(0.891)T(0.109)DSLNK 138.31 0.00083454 102066000 433920 617800 509510 752460 705950 689340 777960 555740 599130 576050 TRUE FALSE 467141.2488 587120.9504 526496.8091 690981.611 678230.8559 715573.3167 675812.9175 628377.1261 651241.2444 557253.5357 0.838292122 1.053597533 0.944806583 1.239977078 1.217095653 1.284107271 1.212756626 1.127632372 1.168662382 1 19.08797434 -5.75591201 24.99979921 1.191345259 0.956368558 0.594397138 0.08763986 89.17180596 403310.6643 0.023298 0.038931881 1.75E-06 5.75591201 -0.234976701 FLSHSTDS(ph)LNK ddPTM_A459_MK2206_30min_R2 1 FLSHSTDSLNK 11 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36 Q12802-4 AKAP13 A-kinase anchor protein 13 1 FLS(0.001)HS(0.169)T(0.007)DS(0.824)LNK 68.919 0.046694 3923500 32198 42064 42016 47593 54484 39627 46520 33441 35740 48064 TRUE FALSE 34663.10364 39975.16293 43416.79247 43704.49966 52344.6844 41135.03325 40411.86812 37811.85352 38848.6006 46495.67562 0.74551242 0.859760879 0.933781301 0.939969128 1.125796834 0.884706647 0.869153262 0.813233769 0.835531479 1 15.50480892 -4.841649448 2.449620573 0.922603137 0.718465108 0.297680216 0.084668679 0.664288191 5.581527113 0.024392119 0.275061931 1.44E-05 4.841649448 -0.204138028 FLSLEYS(ph)PAGK ddPTM_A459_MK2206_30min_R1 2 FLSLEYSPAGK 11 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 FLSLEYS(1)PAGK;FLSLEYS(0.999)PAGK 124.21 0.0036397 10490100 4868.5 4082.9 4285.5 4131.3 3998.9 4257.5 4138.2 4226.7 3728.3 3420.2 TRUE FALSE 4454.408509 3817.102468 3994.6122 4449.493442 3839.615345 4498.555971 3862.148229 4189.746408 4115.870127 3843.920197 1.158819195 0.993023339 1.039202688 1.157540535 0.998880088 1.170304205 1.004742042 1.089967063 1.070748069 1 11.90836267 -12.79451845 0.470615565 0.704548826 1.074500047 0.110227932 0.064719247 643.6091762 17.75127761 190.8932424 0.030774247 1.61E-13 12.79451845 0.369951221 FLVHNVK ddPTM_A459_MK2206_30min_R1 2 FLVHNVK 7 0 D3YTB1;F8W727;P62910 D3YTB1 RPL32 60S ribosomal protein L32 0 ; 103.29 0.026319 13355000 21147 20340 20738.2 19362.3 21686 19329.1 21405.7 20973.2 18806.6 17603.6 FALSE TRUE 19348.3366 19015.8623 19330.54876 20853.5877 20822.2007 20423.49694 19977.76481 20789.83352 20761.61337 19784.46687 0.977955925 0.961151111 0.977056844 1.054038395 1.052451948 1.032299585 1.009770187 1.050815959 1.04938958 1 14.27208057 -5.708421594 6.97849097 1.037112986 0.970212591 0.726241208 0.017845593 0.105364661 10.94277285 0.004883787 0.008440374 1.96E-06 5.708421594 -0.066900395 FMSS(ph)PVLSDLPR ddPTM_A459_MK2206_30min_R2 1 FMSSPVLSDLPR 12 0 E9PJV4;E9PLJ6;E9PL62;E9PP25;E9PS02;E9PP62;E9PIU0;Q6MZQ0-4;Q6MZQ0 E9PJV4 PRR5L Proline-rich protein 5-like 1 FMS(0.275)S(0.725)PVLSDLPR 132.56 0.0018656 1232000 5241.9 7157.9 6222.6 6832.6 5566.9 5752.1 6458 4255.7 6769.5 7725.1 TRUE FALSE 5643.223894 6802.449095 6430.058378 6274.354724 5348.315535 5971.000196 5610.056843 4811.934602 7358.298874 7473.03062 0.755145293 0.910266456 0.860435171 0.839599761 0.715682272 0.799006521 0.75070706 0.643906716 0.984647227 1 12.86747772 -8.373293439 8.340502253 0.998016152 0.790131433 0.571869019 0.071874444 0.251681175 16.85982077 0.073775279 0.019069528 4.23E-09 8.373293439 -0.207884719 FMY(ph)TTPLRRAAVSRLGNMSQIDMS(ph)EK ddPTM_A459_MK2206_30min_R2 1 FMYTTPLRRAAVSRLGNMSQIDMSEK 26 3 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5 Q8IVL0-3 NAV3 Neuron navigator 3 2 FMY(0.607)T(0.195)T(0.195)PLRRAAVS(0.007)RLGNMS(0.264)QIDMS(0.731)EK 42.185 0.042638 6619000 5269.9 8710.4 8198.1 10977 7819.6 10955 11709 9081 9187.2 6714.3 TRUE FALSE 5673.367596 8277.854202 8471.420562 10080.14399 7512.563214 11371.9002 10171.59423 10267.91788 9986.286049 6495.212941 0.873469068 1.27445463 1.304256017 1.551934337 1.156630781 1.75081253 1.566013975 1.580843919 1.537484012 1 12.66516111 -4.30998024 0.897331676 1.486168662 2.44E-13 0.383404092 0.212214746 4.377493885 1.539690154 0.069296087 7.795213865 4.90E-05 4.30998024 -1.486168662 FNADEFEDMVAEK ddPTM_A459_MK2206_30min_R1 1 FNADEFEDMVAEK 13 0 X1WI28;P27635;F8W7C6;A0A087WV22 X1WI28 RPL10 60S ribosomal protein L10 0 143.94 0.012029 0 926.93 1597.6 1162.6 1088.2 1140.5 880.3 991.14 1096.1 1399.9 1097.9 FALSE TRUE 848.089736 1493.59595 1083.685951 1172.013353 1095.07147 930.1418253 925.022859 1086.516913 1545.424615 1233.916141 0.687315538 1.210451748 0.878249271 0.949832257 0.887476413 0.753812836 0.749664283 0.880543562 1.252455141 1 10.26902863 -8.240616781 23.66747034 1.126227525 0.880717451 0.31841831 0.147004828 425.9869073 484189.5459 0.099306699 0.037425127 5.75E-09 8.240616781 -0.245510074 FNADEFEDMVAEK ddPTM_A459_MK2206_30min_R2 1 FNADEFEDMVAEK 13 0 X1WI28;P27635;F8W7C6;A0A087WV22 X1WI28 RPL10 60S ribosomal protein L10 0 151.99 0.0062409 2082500 7682.7 8027.6 7263 8080.6 7809.8 5726.6 8771.2 6756.5 6225.6 6958.1 FALSE TRUE 8270.893419 7628.961057 7505.144795 7420.389131 7503.148011 5944.529776 7619.530904 7639.597749 6767.091435 6731.057767 1.228765776 1.133397056 1.115002286 1.102410555 1.114705633 0.883149422 1.131996065 1.134977297 1.005353344 1 12.71661752 -1.522878745 0.459334173 1.044979252 5.438550427 0.390994063 0.071572784 103.9610021 1.225797529 0.044796167 430.8910797 0.03 1.522878745 4.393571175 FNADEFEDMVAEKR ddPTM_A459_MK2206_30min_R1 1 FNADEFEDMVAEKR 14 1 X1WI28;P27635;F8W7C6;A0A087WV22 X1WI28 RPL10 60S ribosomal protein L10 0 90.476 0.024624 16965000 801.34 790.6 1099.4 1000.8 1071.8 878.88 907.67 1210.9 533.38 461.41 FALSE TRUE 733.181825 739.1317963 1024.775791 1077.881789 1029.107936 928.6414261 847.1209904 1200.313229 588.8267597 518.5729543 1.41384509 1.42531883 1.976145849 2.078553809 1.984499824 1.790763322 1.633561842 2.3146468 1.135475259 1 9.018403155 -8.409841654 6.65369471 1.005098481 1.823479239 0.563498558 0.26844002 0.175025193 8.470619798 0.270349112 0.070001392 3.89E-09 8.409841654 0.818380758 FNADEFEDMVAEKR ddPTM_A459_MK2206_30min_R2 2 FNADEFEDMVAEKR 14 1 X1WI28;P27635;F8W7C6;A0A087WV22 X1WI28 RPL10 60S ribosomal protein L10 0 ; 147.51 0.00064579 6391000 14129.5 29399 20345 24895 30341 28485 25081 20623.6 26377 21961 FALSE TRUE 15211.26538 27939.08841 21023.29215 22860.99886 29149.65989 29569.01664 21787.83457 23319.17533 28671.22378 21244.41437 0.71601246 1.315126316 0.989591512 1.076094566 1.372109364 1.391848988 1.025579439 1.097661481 1.349588804 1 14.37479595 -4.751150802 24.95437843 1.181427709 0.716011477 0.447503758 0.154566436 409.4824124 993108.8363 0.039081793 0.53264186 1.77E-05 4.751150802 -0.465416232 FNAHGDANTIVCNSK ddPTM_A459_MK2206_30min_R2 2 FNAHGDANTIVCNSK 15 0 P09382 P09382 LGALS1 Galectin-1 0 ; 149.6 0.0003962 25136000 181270 219947 213672 218405 234161 224626 237102 189055 205362 224642 FALSE TRUE 195148.1706 209024.7518 220795.7178 200560.6129 224966.6626 233174.2998 205970.2226 213765.1376 223224.0156 217311.9499 0.898009385 0.961864968 1.016031184 0.922915711 1.035224536 1.072993454 0.947809003 0.983678706 1.027205433 1 17.72940798 -3.41525118 0.842794437 1.003189304 1.66E-09 0.379188018 0.040600098 22.16997392 1.966850412 0.014557435 34.54152537 0.000384369 3.41525118 -1.003189302 FNDEHIPESPYLVPVIAPSDDAR ddPTM_A459_MK2206_30min_R1 2 FNDEHIPESPYLVPVIAPSDDAR 23 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7 O75369-8 FLNB Filamin-B 0 ; 145.81 2.09E-07 31786000 9573.6 8941.1 9346.7 7945.2 8724.5 9319.9 9404.3 8898 7695.9 7832.6 FALSE TRUE 8759.315047 8359.032765 8712.272045 8557.140681 8376.984691 9847.584684 8776.956306 8820.205724 8495.916345 8802.961621 0.995041831 0.949570511 0.989697834 0.9720752 0.951609816 1.118667229 0.997045845 1.001958898 0.96512023 1 13.10377326 FNDEHIPESPYLVPVIAPSDDAR ddPTM_A459_MK2206_30min_R2 3 FNDEHIPESPYLVPVIAPSDDAR 23 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7 O75369-8 FLNB Filamin-B 0 ;; 157.53 2.46E-09 21132500 75505 88476 83111 91407 84460 87851 80146 67432 76297 78586 FALSE TRUE 81285.72085 84082.4105 85881.87926 83938.7557 81143.67602 91194.23137 69622.73393 76245.59393 82933.17515 76021.74526 1.069243025 1.106031047 1.129701495 1.104141393 1.067374549 1.199580871 0.915826566 1.002944535 1.090913855 1 16.21412453 -7.262094797 24.99999928 1.002666621 1.110702981 0.516797501 0.052208576 52.11303293 1987717.213 0.02076627 0.014957168 5.47E-08 7.262094797 0.108036361 FNDFDHR ddPTM_A459_MK2206_30min_R1 2 FNDFDHR 7 0 Q9NWH9;Q9NWH9-3;H7C3F4;H0YMM0 Q9NWH9 SLTM SAFB-like transcription modulator 0 ; 131.03 0.005736 6739400 10450.4 10746 10089.7 9732.8 11408.3 10858.6 10297.7 9603.2 9382.5 7912.3 FALSE TRUE 9561.538603 10046.43345 9404.839276 10482.42194 10953.88325 11473.40455 9610.759222 9519.240235 10357.84445 8892.535459 1.075231991 1.129760291 1.057610545 1.178788883 1.231806531 1.290228709 1.08076704 1.070475376 1.164779663 1 13.11837911 -10.9196772 4.969376458 0.999855719 1.143464249 0.257078242 0.072469963 0.000126469 1.54E-05 0.076605359 0.018560913 1.20E-11 10.9196772 0.143608529 FNDFDHR ddPTM_A459_MK2206_30min_R2 3 FNDFDHR 7 0 Q9NWH9;Q9NWH9-3;H7C3F4;H0YMM0 Q9NWH9 SLTM SAFB-like transcription modulator 0 ;; 127.56 0.0074494 13417500 114884 138817 118202 135940 124403 134268 142009 109111 113339 120825 FALSE TRUE 123679.6074 131923.5496 122142.7957 124833.2671 119518.3131 139377.6628 123363.0477 123372.1823 123197.0213 116882.4901 1.058153426 1.12868531 1.045005078 1.068023679 1.022551051 1.192459732 1.055445068 1.05552322 1.054024612 1 16.83469929 -8.557280122 1.181177238 1.001474265 1.08221895 0.222098372 0.045826746 0.827995626 2.519315575 0.043243752 0.013550052 2.77E-09 8.557280122 0.080744685 FNDPSGCAPS(ph)PGAYDVK ddPTM_A459_MK2206_30min_R1 3 FNDPSGCAPSPGAYDVK 17 0 O75330-2;O75330;O75330-3 O75330-2 HMMR Hyaluronan mediated motility receptor 1 FNDPSGCAPS(1)PGAYDVK;FNDPS(0.42)GCAPS(0.57)PGAY(0.01)DVK;FNDPSGCAPS(1)PGAYDVK 153.25 0.00013507 17351700 7451.9 7472.2 6411.8 6117.67 5856.6 5545.2 5910.1 5874.3 5135.03 5233.39 TRUE FALSE 6818.076774 6985.758422 5976.58488 6588.854003 5623.31922 5859.164432 5515.848013 5822.941614 5668.834744 5881.741863 1.159193472 1.187702314 1.016124988 1.120221553 0.956063586 0.996161438 0.937791583 0.990002919 0.963802029 1 12.52202775 -5.551725439 0.82164716 0.968829461 1.205548094 0.733951484 0.043711072 0.490605231 0.515413586 0.017861049 0.087075664 2.81E-06 5.551725439 0.236718633 FNDPSGCAPS(ph)PGAYDVK ddPTM_A459_MK2206_30min_R2 1 FNDPSGCAPSPGAYDVK 17 0 O75330-2;O75330;O75330-3 O75330-2 HMMR Hyaluronan mediated motility receptor 1 FNDPS(0.152)GCAPS(0.848)PGAYDVK 193.06 8.49E-08 8162900 42737 43784 40604 47014 47787 41415 50365 30903 29168 42453 TRUE FALSE 46008.97758 41609.75023 41957.71709 43172.80581 45910.64227 42991.07685 43752.015 34942.12821 31704.97992 41067.76209 1.120318596 1.013197411 1.021670404 1.051257814 1.117924132 1.046832714 1.065361558 0.850840816 0.772016256 1 15.32571871 -7.761026992 24.9999145 0.858571353 1.060021954 0.65636041 0.062035972 5.944405687 360444.6461 0.030035646 0.015959554 1.73E-08 7.761026992 0.2014506 FNDS(ph)EGDDTEETEDYR ddPTM_A459_MK2206_30min_R1 2 FNDSEGDDTEETEDYR 16 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 FNDS(0.805)EGDDT(0.163)EET(0.033)EDYR;FNDS(1)EGDDTEETEDYR 156.83 0.00040688 2569700 1105.82 902.36 930.55 853.86 970.85 897.93 888.6 1106.29 690.57 948.62 TRUE FALSE 1011.764202 843.6162 867.3868587 919.6244451 932.1789887 948.7700206 829.3231153 1096.617823 762.3572227 1066.142207 0.948995542 0.791279244 0.813575199 0.862572027 0.874347702 0.889909446 0.777872886 1.028584945 0.715061478 1 10.05818417 -11.2544679 2.658602341 1.027603658 0.857198143 0.206289226 0.084815568 32487934.78 25572317.83 5927510.751 0.020483716 5.57E-12 11.2544679 -0.170405515 FNDS(ph)EGDDTEETEDYR ddPTM_A459_MK2206_30min_R2 3 FNDSEGDDTEETEDYR 16 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 FNDS(0.951)EGDDT(0.019)EET(0.031)EDYR;FNDS(0.763)EGDDT(0.115)EET(0.122)EDYR;FNDS(0.995)EGDDT(0.005)EETEDYR 170.22 1.00E-05 268004700 326730 385415 346194 421241 462035 338704 444678 306412 303940 413533 TRUE FALSE 351744.7 366275.8515 357735.9352 386824.2628 443893.1844 351593.6181 386291.2444 346461.1005 330376.1518 400039.4521 0.879275027 0.915599323 0.894251638 0.966965285 1.109623519 0.878897359 0.965632871 0.866067331 0.825858925 1 18.60978276 -10.33239789 20.33002557 1 0.926575034 0.085640607 0.074929481 0 0 0.076144912 0.018467854 4.65E-11 10.33239789 -0.073424966 FNDSEGDDT(ph)EETEDYR ddPTM_A459_MK2206_30min_R1 2 FNDSEGDDTEETEDYR 16 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 FNDS(0.087)EGDDT(0.913)EETEDYR;FNDS(0.232)EGDDT(0.767)EET(0.001)EDYR 292.19 2.12E-74 66558000 2300.54 2398.69 2305.8 2046.66 2270.6 2061.61 2586.74 2083.23 2188.87 1892 TRUE FALSE 2104.866992 2242.534845 2149.28872 2204.294108 2180.157194 2178.336577 2414.183294 2065.01654 2416.410869 2126.395244 0.989875706 1.054618069 1.010766332 1.036634235 1.025283141 1.024426942 1.135340808 0.971134856 1.136388391 1 11.05419407 FNDSEGDDTEET(ph)EDYR ddPTM_A459_MK2206_30min_R2 1 FNDSEGDDTEETEDYR 16 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 FNDS(0.003)EGDDT(0.238)EET(0.759)EDYR 276.3 2.45E-51 218530000 199300 176760 213140 194940 171650 147710 194730 146260 181440 189420 TRUE FALSE 214558.5612 167982.3554 220245.9812 179012.7784 164910.1585 153331.2076 169161.7171 165376.6842 197221.3232 183239.2409 1.170920378 0.916737892 1.201958599 0.97693473 0.899971849 0.836781504 0.923174077 0.902517841 1.076305066 1 17.48336897 -5.986172974 24.68671149 0.929801401 1.080373545 0.356747756 0.092994766 219.6010076 392070.6943 0.025297116 0.037501306 1.03E-06 5.986172974 0.150572144 FNEEHIPDSPFVVPVAS(ph)PSGDAR ddPTM_A459_MK2206_30min_R2 1 FNEEHIPDSPFVVPVASPSGDAR 23 0 P21333-2;P21333;Q60FE5;A0A087WWY3;H0Y5C6 P21333-2 FLNA Filamin-A 1 FNEEHIPDSPFVVPVAS(0.5)PS(0.5)GDAR 96.46 4.74E-05 1468400 6025.1 8023.9 7706.6 5875.2 6576.7 7730.8 7336.8 6288 5270.7 7357.8 TRUE FALSE 6486.386289 7625.444794 7963.534198 5395.177366 6318.465713 8025.001011 6373.469347 7109.86319 5729.135959 7117.715589 0.911301696 1.071333168 1.118832875 0.757992828 0.887709776 1.127468625 0.895437485 0.998896781 0.804912178 1 12.79719857 -5.7180286 24.99999911 0.930280831 1.037573475 0.170443432 0.109802709 258.8117967 149046.1845 0.0300011 0.051963019 1.91E-06 5.7180286 0.107292644 FNEEHIPDSPFVVPVAS(ph)PSGDARR ddPTM_A459_MK2206_30min_R1 1 FNEEHIPDSPFVVPVASPSGDARR 24 1 P21333-2;P21333;Q60FE5;A0A087WWY3;H0Y5C6 P21333-2 FLNA Filamin-A 1 FNEEHIPDSPFVVPVAS(0.568)PS(0.432)GDARR 58.342 0.0076647 2037300 792 835.19 1055 839.27 1301.6 723.42 964.03 993.51 364.95 262.01 TRUE FALSE 724.636241 780.8189792 983.3895394 903.9107208 1249.754516 764.3794152 899.7213177 984.8238468 402.8878585 294.4697769 2.460817028 2.651609912 3.339526215 3.069621373 4.244084161 2.595782234 3.055394435 3.344397029 1.368180676 1 8.201975759 -8.326231255 4.712040767 1.062894988 3.108873122 0.715206312 0.48336346 0.117768342 5.017394595 0.466614162 0.124643462 4.72E-09 8.326231255 2.045978134 up FNEEHIPDSPFVVPVASPS(ph)GDAR ddPTM_A459_MK2206_30min_R1 4 FNEEHIPDSPFVVPVASPSGDAR 23 0 P21333-2;P21333;Q60FE5;A0A087WWY3;H0Y5C6 P21333-2 FLNA Filamin-A 1 FNEEHIPDSPFVVPVAS(0.351)PS(0.649)GDAR;FNEEHIPDSPFVVPVAS(0.361)PS(0.639)GDAR;FNEEHIPDSPFVVPVAS(0.37)PS(0.63)GDAR;FNEEHIPDSPFVVPVAS(0.398)PS(0.602)GDAR 185.65 3.15E-22 181150000 18801.1 19031.7 19039.6 16271.9 19548.2 16847.6 19290.8 17830.1 16414.2 16495.5 TRUE FALSE 17201.96772 17792.73287 17747.245 17525.16456 18769.5538 17801.49655 18003.94593 17674.21332 18120.51483 18539.08707 0.927875663 0.959741588 0.957287968 0.94530893 1.012431396 0.960214302 0.971134439 0.953348633 0.977422176 1 14.17828258 -1.993226427 0.527533719 0.974760273 8.39E-07 0.367606004 0.018913514 85.70603606 1.419676739 0.009769844 89.91096568 0.01015719 1.993226427 -0.974759433 FNEEHIPDSPFVVPVASPS(ph)GDAR ddPTM_A459_MK2206_30min_R2 7 FNEEHIPDSPFVVPVASPSGDAR 23 0 P21333-2;P21333;Q60FE5;A0A087WWY3;H0Y5C6 P21333-2 FLNA Filamin-A 1 FNEEHIPDSPFVVPVAS(0.414)PS(0.586)GDAR;FNEEHIPDS(0.001)PFVVPVAS(0.438)PS(0.562)GDAR;FNEEHIPDSPFVVPVAS(0.409)PS(0.591)GDAR;FNEEHIPDSPFVVPVAS(0.395)PS(0.605)GDAR;FNEEHIPDSPFVVPVAS(0.391)PS(0.609)GDAR;FNEEHIPDSPFVVPVAS(0.383)PS(0.617)GDAR;FNEEHIPDSPFVVPVAS(0.192)PS(0.808)GDAR 165.17 1.84E-11 87813400 234414.9 279504.1 262561.9 316214 313996.6 298833.4 326439.5 260931.9 259984.6 277106 TRUE FALSE 252361.885 265624.3328 271315.5827 290378.3047 301667.5158 310205.7144 283577.6015 295036.5952 282597.5906 268064.0539 0.941423818 0.990898738 1.012129671 1.083242234 1.125356091 1.157207428 1.05787254 1.100619762 1.054216656 1 18.03221825 -5.525963141 1.928259219 1.091500702 0.960126068 0.561928187 0.04190337 0.243049908 1.763720467 0.012339866 0.032767307 2.98E-06 5.525963141 -0.131374634 FNEEHIPDSPFVVPVASPSGDAR ddPTM_A459_MK2206_30min_R2 2 FNEEHIPDSPFVVPVASPSGDAR 23 0 P21333-2;P21333;Q60FE5;A0A087WWY3;H0Y5C6 P21333-2 FLNA Filamin-A 0 ; 149.41 1.30E-07 22020000 38223 46820 36863 40827 37997 46116 41222 33830.8 40591 42596 FALSE TRUE 41149.38227 44494.98688 38091.99402 37491.3035 36505.04686 47870.9767 35809.50188 38252.60172 44121.53181 41206.09601 0.998623657 1.079815639 0.924426182 0.909848472 0.885913746 1.161745017 0.869034084 0.928323851 1.070752536 1 15.33057016 FNGGHSPT(ph)HSPEK ddPTM_A459_MK2206_30min_R2 1 FNGGHSPTHSPEK 13 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 FNGGHS(0.131)PT(0.854)HS(0.015)PEK 70.197 0.048188 7302300 33047 41789 39890 49362 41489 39947 40041 37334 36371 45663 TRUE FALSE 35577.10373 39713.81903 41219.91269 45328.9667 39859.93339 41467.21108 34783.5686 42213.68199 39534.48384 44173.02005 0.805403472 0.899051479 0.933146809 1.026168613 0.902359253 0.938745212 0.787439223 0.955644009 0.894991644 1 15.43087785 -4.781378723 3.02661792 0.925600515 0.786040647 0.270456285 0.061129454 0.542389738 7.237596167 0.015793092 0.1854975 1.65E-05 4.781378723 -0.139559868 FNGS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 FNGSPSK 7 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 FNGS(0.995)PS(0.005)K 79.07 0.047444 27960000 106870 68432 66555 69635 119270 62604 99788 130110 105930 99105 TRUE FALSE 115052.0494 65033.76639 68773.91048 63945.59775 114586.8605 64986.43909 86685.71573 147115.8237 115143.5999 95871.21197 1.20006879 0.678345095 0.717357266 0.666994778 1.195216564 0.67785144 0.904189213 1.534515114 1.201023723 1 16.54881005 -7.634299462 7.530541904 1.273485405 0.843966295 0.378519803 0.223868811 0.211983844 13.21633821 0.102932008 0.059021537 2.32E-08 7.634299462 -0.42951911 FNHDGEEEEEDDDYGSR ddPTM_A459_MK2206_30min_R1 2 FNHDGEEEEEDDDYGSR 17 0 Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4;G3V5I6;Q6PJT7-9;Q6PJT7-2;H0YJA2;Q6PJT7-3;Q6PJT7-11 Q6PJT7-5;Q6PJT7-9 ZC3H14 Zinc finger CCCH domain-containing protein 14 0 ; 207.05 7.78E-09 12074900 3166.2 2901.9 3117.7 2763.1 2885.7 2785.5 3028.3 2863 2561 2398.1 FALSE TRUE 2896.898064 2712.985783 2906.07921 2975.914441 2770.756458 2943.212603 2826.287632 2837.969093 2827.225115 2695.194733 1.074838129 1.006601026 1.078244616 1.104155631 1.02803572 1.092022245 1.048639491 1.052973671 1.048987326 1 11.3961738 -9.050353389 0.898416948 0.999734291 1.061723642 0.309817515 0.027392819 2.35515045 2.838901108 0.027489591 0.008760679 8.91E-10 9.050353389 0.061989351 FNHDGEEEEEDDDYGSR ddPTM_A459_MK2206_30min_R2 2 FNHDGEEEEEDDDYGSR 17 0 Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4;G3V5I6;Q6PJT7-9;Q6PJT7-2;H0YJA2;Q6PJT7-3;Q6PJT7-11 Q6PJT7-5;Q6PJT7-9 ZC3H14 Zinc finger CCCH domain-containing protein 14 0 ; 197.51 8.77E-08 15933400 70303 101100 81732 83660 100038 91967 93238 65661 73815 87176 FALSE TRUE 75685.45173 96079.52101 84456.90409 76824.71038 96110.00547 95466.86863 80995.7386 74243.11815 80235.29527 84331.45426 0.897475947 1.139308243 1.001487581 0.910985243 1.139669727 1.132043429 0.960445178 0.880372796 0.951427863 1 16.36378321 -7.503215317 23.85738531 0.933621983 1.039452092 0.201659586 0.086167748 608.2788957 738021.156 0.036857575 0.024411616 3.14E-08 7.503215317 0.105830109 FNHPEQAR ddPTM_A459_MK2206_30min_R2 1 FNHPEQAR 8 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;O43896;A0A3B3ITK3;A0A3F2YNW9;A0A3B3IUA1;A0A3B3IU40;A0A3B3IT28;A0A3B3ITE5;A0A3B3ITF7;A0A3B3ITW6;Q12756;Q12756-3;Q12756-2;O60333-3 A0A087WWA3;O43896;A0A3B3ITK3;O60333-3 KIF1B;KIF1Bbeta;KIF1C;KIF1A Kinesin-like protein;Kinesin-like protein KIF1B;Kinesin-like protein KIF1C;Kinesin-like protein KIF1A 0 101.72 0.024616 0 3177.7 4282.8 3471.4 5269.8 5768.6 5993.5 6168.7 5392.7 5661.8 3856.3 FALSE TRUE 3420.987155 4070.12238 3587.134743 4839.240483 5542.095779 6221.586842 5358.74228 6097.544406 6154.25313 3730.469247 0.917039367 1.091048367 0.961577353 1.297220313 1.485629665 1.667775937 1.436479415 1.634524775 1.649726274 1 11.8651414 -5.977282439 2.504788185 1.518600336 0.995157188 0.571515343 0.186922009 0.18443748 2.336481769 0.054235642 0.083811863 1.05E-06 5.977282439 -0.523443148 FNHWELK ddPTM_A459_MK2206_30min_R1 1 FNHWELK 7 0 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 0 107.32 0.02353 4457400 5502.4 5693 5838 5299.5 5507.4 5176.2 6355.1 5081.5 4590.7 4512.4 FALSE TRUE 5034.391986 5322.384665 5441.732826 5707.668408 5288.028596 5469.271971 5931.162875 5037.072981 5067.919693 5071.430179 0.992696697 1.049483968 1.0730174 1.125455386 1.042709533 1.078447652 1.169524703 0.993225343 0.999307792 1 12.30817694 FNHWELK ddPTM_A459_MK2206_30min_R2 1 FNHWELK 7 0 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 0 98.997 0.032534 0 20063 24458 22968 21624 24073 22376 26196 20920 19068 23025 FALSE TRUE 21599.03871 23243.45129 23733.74166 19857.25003 23127.77306 23227.53436 22756.43373 23654.31583 20726.50017 22273.69614 0.969710576 1.043538133 1.065550213 0.891511221 1.038344643 1.042823527 1.02167299 1.06198431 0.93053708 1 14.44305336 FNNDSHS(ph)PK ddPTM_A459_MK2206_30min_R2 4 FNNDSHSPK 9 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 FNNDSHS(1)PK;FNNDSHS(1)PK;FNNDSHS(1)PK;FNNDS(0.071)HS(0.929)PK 132.86 0.0032612 29782000 432512 275651 343458 292550 332177 191550 343162 580106 386553 478842 TRUE FALSE 465625.4513 261962.5722 354908.7183 268647.7292 319134.0619 198839.5695 298104.4172 655927.846 420174.6812 463217.4248 1.00519848 0.56552832 0.766181709 0.579960327 0.688950901 0.429257534 0.643551821 1.416025846 0.907078747 1 18.82133 -7.736983394 24.99845067 1.121164192 0.656375468 0.537022407 0.186572346 149.7988098 153121.7535 0.08360695 0.048241538 1.83E-08 7.736983394 -0.464788725 FNPFVTSDR ddPTM_A459_MK2206_30min_R2 1 FNPFVTSDR 9 0 J3KSS0;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;P61254;E5RHH1;E5RIT6;Q9UNX3 J3KSS0 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 0 160.82 0.01266 14439000 29246 28067 31586 33701 31059 30478 34732 29596 29471 33637 FALSE TRUE 31485.09625 26673.23359 32639.06148 30947.5205 29839.4676 31637.86165 30171.64668 33464.29882 32034.33431 32539.42744 0.967598348 0.819720434 1.003061948 0.951077598 0.917024974 0.972293127 0.927233484 1.028423099 0.984477504 1 14.98990125 -6.999592967 0.43816606 1.0096092 0.909305365 0.236310946 0.049076622 1.638245616 0.685273025 0.048622809 0.061666288 1.00E-07 6.999592967 -0.100303835 FNS(ph)LPRPDPEPVPPVGSK ddPTM_A459_MK2206_30min_R1 1 FNSLPRPDPEPVPPVGSK 18 1 A1L390-3;A1L390;G3V311;A1L390-2 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 FNS(1)LPRPDPEPVPPVGSK 61.612 0.024698 13057000 4153.4 3855.3 3599.4 2673.2 2770.4 2834.4 2775.9 2800.8 2708.5 2693.2 TRUE FALSE 3800.13152 3604.319269 3355.082757 2879.090327 2660.049102 2994.881279 2590.724776 2776.312901 2990.058267 3026.853949 1.255472376 1.190780702 1.108438931 0.951182441 0.87881647 0.989436996 0.855913374 0.917227243 0.987843589 1 11.56360335 -5.54759736 1.924697198 0.929507444 1.234663343 0.859784746 0.046849646 0.113896976 0.828616091 0.01363184 0.03519468 2.83E-06 5.54759736 0.305155899 FNS(ph)LPRPDPEPVPPVGSK ddPTM_A459_MK2206_30min_R2 1 FNSLPRPDPEPVPPVGSK 18 1 A1L390-3;A1L390;G3V311;A1L390-2 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 FNS(1)LPRPDPEPVPPVGSK 85.805 0.0041224 3495400 24046 23200 23167 21799 19707 15054 20769 14750 16072 17878 TRUE FALSE 25886.98025 22047.92174 23939.37622 20017.95197 18933.20416 15626.89052 18042.00535 16677.87564 17469.91351 17294.64232 1.496820794 1.274841152 1.38420765 1.157465508 1.094743898 0.903568297 1.043213558 0.964337702 1.010134421 1 14.07803756 -5.991781952 1.370946298 0.984976987 1.401098058 0.87519196 0.065102107 0.13287737 0.506608529 0.021951104 0.040214953 1.02E-06 5.991781952 0.41612107 FNS(ph)TLVSR ddPTM_A459_MK2206_30min_R1 1 FNSTLVSR 8 0 A0A3B3ISL2;A0A3B3IRU6;Q9GZU2-2;Q9GZU2-4;Q9GZU2;M0QZD4;Q9GZU2-3 A0A3B3ISL2 PEG3 Paternally-expressed gene 3 protein 1 FNS(0.5)T(0.5)LVSR 79.713 0.031684 7868100 1397.6 1391 1207 1147.3 1228.7 1111.5 1592.1 1540.8 247.69 696.67 TRUE FALSE 1278.726781 1300.445647 1125.072203 1235.665245 1179.758277 1174.432169 1485.893914 1527.328948 273.4382619 782.9787392 1.633156454 1.660895222 1.436912839 1.578159384 1.506756465 1.499954099 1.897744906 1.95066465 0.349228208 1 9.612829323 -8.26106006 25 0.674614059 1.635771839 0.766931226 0.214040472 15.39430266 1014792.364 0.168065977 0.054522468 5.48E-09 8.26106006 0.96115778 FNVWDTAGQEK ddPTM_A459_MK2206_30min_R1 2 FNVWDTAGQEK 11 0 F5H018;B5MDF5;J3KQE5;P62826;H0YFC6 F5H018 RAN GTP-binding nuclear protein Ran 0 ; 145.23 0.0097725 14751800 3504.3 3118 3229.9 3132.3 4245.1 4074.1 4087.1 2879.6 2999.8 3068.8 FALSE TRUE 3206.240883 2915.017633 3010.663387 3373.550289 4076.008678 4304.772021 3814.457016 2854.423961 3311.639945 3448.986112 0.92961838 0.84518103 0.872912586 0.978128116 1.181799098 1.248126806 1.105964736 0.827612483 0.960177814 1 11.7519566 -5.946910276 4.418430778 1.059551338 0.881124531 0.320317328 0.111357972 0.276142525 11.37514547 0.037031351 0.055434133 1.13E-06 5.946910276 -0.178426807 FNVWDTAGQEK ddPTM_A459_MK2206_30min_R2 1 FNVWDTAGQEK 11 0 F5H018;B5MDF5;J3KQE5;P62826;H0YFC6 F5H018 RAN GTP-binding nuclear protein Ran 0 160.67 0.0083431 7325400 28702 36191 28674 29132 32026 27442 32803 28095 22386 29526 FALSE TRUE 30899.44719 34393.80757 29629.97685 26751.82241 30768.49832 28486.32454 28495.9267 31767.11296 24333.09382 28562.56904 1.081816105 1.204156654 1.037370861 0.93660421 1.077231473 0.997330615 0.997666795 1.112193827 0.851922451 1 14.80183813 -5.42937015 5.848733482 1.003053626 1.141072808 0.388219075 0.072324675 0.217910295 10.94868658 0.017857139 0.03765784 3.72E-06 5.42937015 0.138019182 FPATS(ph)PLK ddPTM_A459_MK2206_30min_R2 1 FPATSPLK 8 0 H0YES2;Q5TB30-2;Q5TB30 H0YES2 DEPDC1 DEP domain-containing protein 1A 1 FPAT(0.383)S(0.617)PLK 86.882 0.03325 5061400 75176 74294 65277 82372 82738 58337 97552 67426 61423 77747 TRUE FALSE 80931.53236 70604.66799 67453.3026 75641.94411 79489.29039 60557.05541 84743.30522 76238.80971 66765.46151 75210.12176 1.076072349 0.938765506 0.896864691 1.005741546 1.05689618 0.805171618 1.126753996 1.01367752 0.887719099 1 16.19863921 FPEAEALS(ph)PEQAAHYLR ddPTM_A459_MK2206_30min_R1 3 FPEAEALSPEQAAHYLR 17 0 Q2NKX8 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 FPEAEALS(1)PEQAAHYLR;FPEAEALS(1)PEQAAHYLR;FPEAEALS(1)PEQAAHYLR 183.09 4.43E-08 22554300 7415.91 7778.1 8088.9 5960.03 7014.62 8153.6 9776.9 6590.81 9585.4 12193.8 TRUE FALSE 6785.147912 7271.744276 7539.848005 6419.072543 6735.212832 8615.249786 9124.70084 6533.187243 10581.83663 13704.46 0.495105091 0.530611514 0.550174761 0.468392957 0.49146138 0.628645695 0.665819802 0.476719786 0.772145464 1 13.74235786 -9.146253612 0.466076984 1.040248662 0.507583167 0.811473132 0.069574655 1.027799413 0.375883929 0.14787515 0.040010163 7.14E-10 9.146253612 -0.532665495 FPEAEALS(ph)PEQAAHYLR ddPTM_A459_MK2206_30min_R2 4 FPEAEALSPEQAAHYLR 17 0 Q2NKX8 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 FPEAEALS(1)PEQAAHYLR;FPEAEALS(1)PEQAAHYLR;FPEAEALS(1)PEQAAHYLR;FPEAEALS(1)PEQAAHYLR 189.15 4.66E-08 17570700 86984.9 64601.2 67845.9 80407.6 70540.5 72095.7 85692 64004.4 60320.4 82609.3 TRUE FALSE 93644.53082 61393.19835 70107.84844 73838.04187 67770.72553 74839.35238 74440.53747 72369.99484 65566.95936 79913.76531 1.171819779 0.768243094 0.87729377 0.923971503 0.848048209 0.936501391 0.931510825 0.905601113 0.820471406 1 16.28615641 -4.745519807 24.994352 0.889307843 1.17182057 0.646853522 0.062425932 564.1950737 885760.2459 0.014974419 0.378515531 1.80E-05 4.745519807 0.282512727 FPEFCSSPS(ph)PPVEVK ddPTM_A459_MK2206_30min_R2 2 FPEFCSSPSPPVEVK 15 0 Q68E01-4;Q68E01-3;Q68E01-2;Q68E01 Q68E01-4 INTS3 Integrator complex subunit 3 1 FPEFCS(0.009)S(0.058)PS(0.932)PPVEVK;FPEFCS(0.096)S(0.024)PS(0.879)PPVEVK 91.592 0.014376 8098800 24414 31191 30534 31487 30689 25515.8 32949 27749 27085 38462 TRUE FALSE 26283.15461 29642.1003 31551.98832 28914.41138 29483.99566 26486.82165 28622.75672 31375.88958 29440.80434 37206.98809 0.706403715 0.796680995 0.848012428 0.777123139 0.792431669 0.711877607 0.769284433 0.84327948 0.79127083 1 15.18328599 -9.424389913 0.767020086 1.005218399 0.777040554 0.702660212 0.042999458 2.467180306 1.639730809 0.080907928 0.015478059 3.76E-10 9.424389913 -0.228177845 FPLDYYSIPFPTPT(ph)TPLTGR ddPTM_A459_MK2206_30min_R2 1 FPLDYYSIPFPTPTTPLTGR 20 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5;H0Y5H6;H7C2T8 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 FPLDYYSIPFPT(0.004)PT(0.346)T(0.346)PLT(0.305)GR 74.475 0.015106 26504000 12074 14648 13561 11716 14900 12076 9910 10702 4452.4 4590.3 TRUE FALSE 12998.39472 13920.60162 14013.11697 10758.76532 14314.95113 12535.56064 8608.805096 12100.78815 4839.661704 4440.518887 2.927224285 3.13490427 3.155738626 2.422862192 3.22371135 2.822994556 1.938693498 2.725084265 1.089886526 1 12.11651255 -8.096031995 0.814973798 0.919864281 2.986673343 0.772221697 0.376479031 0.266063341 0.359577462 0.339764537 0.135362784 8.02E-09 8.096031995 2.066809062 up FPPEDFRHS(ph)PEDFR ddPTM_A459_MK2206_30min_R1 5 FPPEDFRHSPEDFR 14 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR 108.06 0.0021432 107862400 15143 14909.9 15502.1 12691.7 15654 14422.1 15290.3 13334.9 13644.4 12273.5 TRUE FALSE 13855.00833 13939.2628 14449.86064 13669.21693 15030.46803 15238.66684 14270.31199 13218.31438 15062.78421 13794.03384 1.004420352 1.010528389 1.047544236 0.990951385 1.089635433 1.104728828 1.034527837 0.958263154 1.091978197 1 13.75175679 -5.188015179 4.976745052 1.040394137 1.006104092 0.076235989 0.044884379 0.615290341 28.2405968 0.011863324 0.0332286 6.49E-06 5.188015179 -0.034290046 FPPEDFRHS(ph)PEDFR ddPTM_A459_MK2206_30min_R2 4 FPPEDFRHSPEDFR 14 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR 71.354 0.023541 39659800 46091.5 60158.8 54361 69271 61022.1 59719.5 61054 48756 47692.1 53105 TRUE FALSE 49620.30068 57171.40147 56173.36861 63611.33771 58626.06574 61992.16742 53037.53646 55128.5766 51840.27265 51372.1882 0.965898133 1.112886242 1.093458748 1.23824466 1.141202425 1.206726238 1.032417312 1.073121051 1.009111632 1 15.64869991 -7.299368966 23.94252721 1.034755855 1.130047341 0.313824998 0.070449908 465.258446 293685.5462 0.030637679 0.020656583 5.02E-08 7.299368966 0.095291486 FPQGPPSQMGS(ph)PMGSR ddPTM_A459_MK2206_30min_R1 2 FPQGPPSQMGSPMGSR 16 0 Q8WXF1 Q8WXF1 PSPC1 Paraspeckle component 1 1 FPQGPPSQMGS(0.62)PMGS(0.38)R;FPQGPPSQMGS(0.968)PMGS(0.032)R 149.19 0.00026633 17716800 2302.18 2078.52 2318.44 2247.95 2399.53 2387.95 3157.53 2445.41 3023.79 3066.26 TRUE FALSE 2106.367502 1943.20797 2161.070752 2421.087499 2303.951639 2523.153665 2946.896935 2424.030038 3338.123791 3446.131438 0.611226687 0.563880979 0.627100501 0.70255228 0.668561743 0.732169887 0.855131903 0.703406147 0.968658292 1 11.75076201 -7.486441055 0.325040021 1.028976703 0.536662857 0.827323136 0.058955446 0.579476727 0.178425148 0.081695542 0.101668852 3.26E-08 7.486441055 -0.492313846 FPQGPPSQMGSPMGS(ph)R ddPTM_A459_MK2206_30min_R2 1 FPQGPPSQMGSPMGSR 16 0 Q8WXF1 Q8WXF1 PSPC1 Paraspeckle component 1 1 FPQGPPS(0.018)QMGS(0.068)PMGS(0.914)R 104.78 0.0037824 11900000 8170.9 6672.6 6671.4 10283 5452.5 6014 10893 9350.4 7119.7 8725.9 TRUE FALSE 8796.470386 6341.248387 6893.821146 9442.846006 5238.407453 6242.866984 9462.736015 10572.52938 7738.958637 8441.174598 1.0420908 0.751228199 0.816689794 1.118664932 0.620578024 0.739573256 1.12102124 1.252495048 0.916810634 1 13.04322805 -7.272780603 24.54141562 1.093623007 0.84425618 0.32181331 0.158386279 661.0049346 1430350.242 0.065984499 0.044957561 5.34E-08 7.272780603 -0.249366827 FPTTATKIS(ph)PK ddPTM_A459_MK2206_30min_R1 1 FPTTATKISPK 11 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 FPTTATKIS(0.999)PK 135.58 0.007053 25240000 2699.9 4054.6 3211.1 2947.6 2266.1 1872.3 2149.2 2629 2263.7 1525 TRUE FALSE 2470.259327 3790.644803 2993.139479 3174.624663 2175.836438 1978.308008 2005.830789 2606.01493 2499.019716 1713.928513 1.441284924 2.211670308 1.746361914 1.852250335 1.269502445 1.154253513 1.170311815 1.520492197 1.458065314 1 10.74309122 -6.261875015 24.9278362 1.278146652 1.836623927 0.591180606 0.223799994 26.44128612 1513011.236 0.066801449 0.080497595 5.47E-07 6.261875015 0.558477275 FPYSPS(ph)PPMANGAAR ddPTM_A459_MK2206_30min_R2 1 FPYSPSPPMANGAAR 15 0 Q92908-2;Q92908 Q92908-2 GATA6 Transcription factor GATA-6 1 FPY(0.001)S(0.417)PS(0.582)PPMANGAAR 113.54 0.002737 2083700 12004 16072 15127 13473 13547 8542.8 12123 8065.6 13048 10606 TRUE FALSE 12923.03547 15273.88785 15631.32663 12372.2128 13015.07671 8867.90224 10531.23554 9119.801613 14182.89145 10259.92709 1.259564065 1.488693606 1.523531941 1.205877264 1.26853501 0.864324099 1.026443507 0.88887587 1.382357919 1 13.32473286 -6.275320992 1.819159223 1.031774353 1.418713266 0.495423525 0.160149777 0.277020151 1.806505705 0.055234198 0.072198646 5.30E-07 6.275320992 0.386938913 FQCVFSSS(ph)VLQPHS(ph)T(ph)S(ph)CLFK ddPTM_A459_MK2206_30min_R1 1 FQCVFSSSVLQPHSTSCLFK 20 0 Q9H334-3;Q9H334-4 Q9H334-3 FOXP1 Forkhead box protein P1 4 FQCVFS(0.298)S(0.344)S(0.397)VLQPHS(0.961)T(1)S(1)CLFK 64.069 0.045464 0 1055.7 828.55 667.75 458.45 1796.7 1657.3 1572.5 1456.8 638.67 712.8 TRUE FALSE 965.9071713 774.6112444 622.4249905 493.7598984 1725.133634 1751.134894 1467.601394 1444.063351 705.062032 801.1070454 1.205715487 0.966926017 0.776956081 0.616346968 2.153437102 2.185893763 1.831966655 1.80258476 0.880109638 1 9.645851221 -6.254570803 24.98462462 1.71912105 0.88869397 0.417211017 0.429017976 506.7097462 1843168.655 0.130999672 0.165343332 5.56E-07 6.254570803 -0.83042708 FQDGDLTLYQSNTILR ddPTM_A459_MK2206_30min_R1 2 FQDGDLTLYQSNTILR 16 0 P09211;A8MX94;A0A087X2E9 P09211 GSTP1 Glutathione S-transferase P 0 ; 260.73 5.63E-38 39146000 3456.2 2913.3 3501.7 3321.6 3572 3234.2 3024.2 3244.1 2536.5 2924.8 FALSE TRUE 3162.232041 2723.64364 3264.01436 3577.430208 3429.719676 3417.317609 2822.461136 3215.737176 2800.178252 3287.146305 0.961999177 0.828573902 0.99296291 1.088308787 1.043372992 1.039600094 0.85863569 0.978276255 0.851856897 1 11.68261995 -10.24103207 11.19119606 1.000003769 0.963543845 0.018410955 0.083967273 0 0 0.086612162 0.021006535 5.74E-11 10.24103207 -0.036459923 FQDGDLTLYQSNTILR ddPTM_A459_MK2206_30min_R2 2 FQDGDLTLYQSNTILR 16 0 P09211;A8MX94;A0A087X2E9 P09211 GSTP1 Glutathione S-transferase P 0 ; 154.72 0.0014633 11622900 27126 32305 36691 31257 34647 31218 30117 29154 33862 28965 FALSE TRUE 29202.78742 30700.78068 37914.25963 28703.20311 33286.58469 32406.02287 26162.60172 32964.5279 36807.25555 28019.87442 1.042216927 1.095678739 1.353120255 1.024387286 1.187963379 1.156537049 0.933715881 1.176469509 1.313612438 1 14.77416287 FQELLAS(ph)PAYR ddPTM_A459_MK2206_30min_R2 2 FQELLASPAYR 11 0 Q9NSI2-2;Q9NSI2 Q9NSI2-2 FAM207A Protein FAM207A 1 FQELLAS(1)PAYR;FQELLAS(1)PAYR 98.592 0.018095 5600000 25821 26501 24688.6 31837 24201 29179 31292 24459 21484.3 25533 TRUE FALSE 27797.87561 25184.99888 25511.7056 29235.81526 23250.74714 30289.42729 27183.32281 27655.87528 23352.96558 24699.8603 1.125426431 1.019641349 1.032868417 1.18364294 0.941331119 1.226299539 1.10054561 1.119677397 0.945469541 1 14.59221526 -8.261631434 24.99999028 0.972734761 1.091754247 0.275990148 0.078306125 22.47062407 2923900.616 0.059604895 0.01901321 5.47E-09 8.261631434 0.119019486 FQEQECPPS(ph)PEPTR ddPTM_A459_MK2206_30min_R1 2 FQEQECPPSPEPTR 14 0 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 FQEQECPPS(1)PEPTR;FQEQECPPS(1)PEPTR 167.18 0.00021927 14441400 4989.7 4368.4 3703.8 4038.6 5445.1 4597.5 5716 4848.9 6645.2 8582.8 TRUE FALSE 4565.299813 4084.016366 3452.396375 4349.653672 5228.210137 4857.806477 5334.696069 4806.506579 7335.99232 9646.102061 0.473279236 0.42338515 0.357905852 0.450923455 0.542002366 0.503603056 0.553041636 0.498284856 0.760513653 1 13.23573036 -8.762764204 0.518021874 1.025472272 0.427794405 0.904031929 0.055412419 0.384048653 0.223132697 0.073477071 0.029772989 1.73E-09 8.762764204 -0.597677867 down FQEQECPPS(ph)PEPTR ddPTM_A459_MK2206_30min_R2 2 FQEQECPPSPEPTR 14 0 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 FQEQECPPS(0.91)PEPT(0.09)R;FQEQECPPS(0.956)PEPT(0.044)R 135.57 0.00060224 22061300 149293 82084 95572 94456 89594 108836 162114 89526 123686 132545 TRUE FALSE 160722.9869 78007.82792 98758.32278 86738.64265 86076.08939 112977.8302 140828.2371 101227.3556 134443.9847 128220.0675 1.253493232 0.608390164 0.770225166 0.676482584 0.671315271 0.881124402 1.098332264 0.789481378 1.048540898 1 16.96826255 -6.997103995 23.4445883 0.96985727 0.777362789 0.186060202 0.182446367 66.41226261 537624.7941 0.062646645 0.054888588 1.01E-07 6.997103995 -0.19249448 FQEQECPPS(ph)PEPTRK ddPTM_A459_MK2206_30min_R2 1 FQEQECPPSPEPTRK 15 1 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 FQEQECPPS(0.998)PEPT(0.002)RK 68.49 0.029416 8913800 30566 25259 23526 35093 32500 34449 37940 20652 42888 29416 TRUE FALSE 32906.15646 24004.67479 24310.3451 32225.78964 31223.8867 35759.98083 32958.43243 23351.28731 46618.32072 28456.15833 1.156380847 0.843566954 0.854308752 1.132471547 1.097262896 1.256669309 1.158217917 0.820605756 1.638250679 1 14.79645329 -5.8379581 7.176088162 1.153051448 0.941256801 0.166120352 0.211393198 0.377799865 29.48845818 0.056921244 0.085151393 1.45E-06 5.8379581 -0.211794646 FQEQECPPSPEPT(ph)R ddPTM_A459_MK2206_30min_R2 1 FQEQECPPSPEPTR 14 0 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 FQEQECPPS(0.069)PEPT(0.931)R 125.39 0.0032355 15094000 69837 53900 58754 60435 40460 48409 66143 43893 49206 47603 TRUE FALSE 75183.77442 51223.40438 60712.82904 55497.26718 38871.3371 50251.23842 57458.34465 49629.96581 53485.84894 46049.71801 1.632665251 1.112350012 1.318419127 1.205159762 0.844116724 1.091238787 1.247745852 1.077747442 1.161480488 1 15.4909047 -2.118914732 1.079998737 1.104330888 200 0.585524133 0.128206296 472.5861336 1.882446143 0.040402661 231197.466 0.007604756 2.118914732 198.8956691 FQETEFLS(ph)PPR ddPTM_A459_MK2206_30min_R1 3 FQETEFLSPPR 11 0 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 FQETEFLS(1)PPR;FQETEFLS(1)PPR;FQETEFLS(1)PPR 190.35 1.98E-05 135481000 6931.5 5503 5630.7 5032.1 6360 5060.1 5819.8 5095.7 4667 4024 TRUE FALSE 6341.939526 5144.7537 5248.503772 5419.673214 6106.667732 5346.598489 5431.571761 5051.148832 5152.151351 4522.5235 1.402301066 1.137584736 1.160525484 1.198373699 1.350278828 1.182215745 1.201004652 1.116887249 1.139220471 1 12.14291228 -8.376201248 0.705042046 1.002882822 1.23740036 0.469691837 0.079319298 0.652450697 0.744617448 0.078015973 0.031817611 4.21E-09 8.376201248 0.234517538 FQETEFLS(ph)PPR ddPTM_A459_MK2206_30min_R2 4 FQETEFLSPPR 11 0 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 FQET(0.018)EFLS(0.982)PPR;FQET(0.012)EFLS(0.988)PPR;FQETEFLS(1)PPR;FQETEFLS(1)PPR 153.81 0.00055408 122258500 89335.4 91062.7 79710.3 88372.3 99647.2 101408.9 99837.2 76525.9 83127.5 107446.6 TRUE FALSE 96174.98691 86540.65874 82367.80162 81152.0004 95734.55024 105268.0868 86728.45571 86528.09788 90357.77969 103940.6262 0.925287738 0.83259705 0.792450504 0.780753429 0.921050351 1.012771335 0.834403821 0.832476203 0.869321101 1 16.66540013 -6.277987681 24.55290939 0.904485993 0.829879548 0.243368857 0.067365369 1078.411173 1600047.766 0.022184497 0.025226147 5.27E-07 6.277987681 -0.074606444 FQFDGDKK ddPTM_A459_MK2206_30min_R2 1 FQFDGDKK 8 1 P52209-2;P52209;K7ELN9 P52209-2 PGD "6-phosphogluconate dehydrogenase, decarboxylating" 0 87.639 0.043551 26643000 150010 201870 197790 212950 223970 159500 231060 162710 150440 225620 FALSE TRUE 161494.8809 191845.4293 204384.2199 195551.3038 215175.8124 165569.8843 200721.5444 183976.7557 163524.9993 218258.0379 0.739926385 0.878984486 0.936433874 0.895963813 0.985878067 0.758596961 0.919652474 0.842932327 0.749227845 1 17.73567526 -7.206105598 0.008007795 1.747873575 3.95E-06 0.07303076 0.087505056 12736.6353 57.80065256 6219.888499 6390.934031 6.22E-08 7.206105598 -1.747869628 FQPHFGQQECVS(ph)PYR ddPTM_A459_MK2206_30min_R1 1 FQPHFGQQECVSPYR 15 0 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7 P25054-2 APC Adenomatous polyposis coli protein 1 FQPHFGQQECVS(1)PYR 78.552 0.021673 5784400 1283.9 1592.4 1900.4 1322.7 978.47 960.34 1212.3 1516.1 1526.7 1379.8 TRUE FALSE 1174.697563 1488.734471 1771.406143 1424.574583 939.495468 1014.713621 1131.429679 1502.844898 1685.405928 1550.740041 0.757507727 0.960015497 1.142297288 0.918641775 0.605836854 0.654341536 0.729606284 0.969114654 1.086839756 1 10.59874114 -10.54482358 9.765298459 0.999999997 0.866248743 0.050002342 0.170351581 1.30E-10 0 0.184161089 0.044665625 2.85E-11 10.54482358 -0.133751254 FQPHFGQQECVS(ph)PYR ddPTM_A459_MK2206_30min_R2 2 FQPHFGQQECVSPYR 15 0 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7 P25054-2 APC Adenomatous polyposis coli protein 1 FQPHFGQQECVS(1)PYR;FQPHFGQQECVS(1)PYR 139.74 0.00025952 13400800 50470 50657 48440 66149 61641 64278 62909 49925 55580 50016 TRUE FALSE 54334.022 48141.44704 50054.96542 60744.4151 59220.66462 66724.14433 54648.97273 56450.36892 60414.24793 48383.98202 1.122975409 0.994987288 1.03453588 1.255465395 1.223972525 1.379054422 1.12948481 1.166716061 1.248641501 1 15.56224189 -5.754744987 24.96958732 1.212884668 1.045248253 0.328068286 0.096910475 158.7165925 591993.8742 0.025761868 0.043353768 1.76E-06 5.754744987 -0.167636415 FQPPQVPDQAPAEAPTEKTEVS(ph)PVPR ddPTM_A459_MK2206_30min_R1 2 FQPPQVPDQAPAEAPTEKTEVSPVPR 26 1 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 FQPPQVPDQAPAEAPT(0.108)EKT(0.065)EVS(0.826)PVPR;FQPPQVPDQAPAEAPT(0.052)EKT(0.041)EVS(0.907)PVPR 110.7 1.08E-08 22771600 2338.25 2118.7 2439.6 2636.6 2664.2 1923.09 1645.81 2636.6 1148.01 458.47 TRUE FALSE 2139.369559 1980.772245 2274.006749 2839.671389 2558.079272 2031.973694 1536.021018 2613.548484 1267.349748 515.2687249 4.151949178 3.844153835 4.413244273 5.511049384 4.964553735 3.943522275 2.981009605 5.07220477 2.459589893 1 9.009181218 -8.488573418 3.811463724 1.009239793 4.337092231 0.721485684 0.682418053 0.106211534 3.629105119 0.702921943 0.184806888 3.25E-09 8.488573418 3.327852438 FQPPQVPDQAPAEAPTEKTEVS(ph)PVPR ddPTM_A459_MK2206_30min_R2 1 FQPPQVPDQAPAEAPTEKTEVSPVPR 26 1 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 FQPPQVPDQAPAEAPT(0.001)EKT(0.001)EVS(0.998)PVPR 153.25 1.20E-11 6019500 10592 22068 18981 20916 28183 22633 25189 12968 23882 17324 TRUE FALSE 11402.93166 20972.13521 19613.81707 19207.09589 27076.39381 23494.31467 21881.65404 14662.96213 25959.21319 16758.7193 0.680417845 1.251416343 1.170364914 1.146095686 1.615660083 1.401915878 1.305687723 0.874945267 1.548997434 1 14.03262428 -4.760687445 6.459572774 1.265428515 0.663355094 0.389074299 0.2166877 0.12857562 24.77420166 0.053518771 0.340249991 1.74E-05 4.760687445 -0.60207342 FQPSSVLS(ph)PYER ddPTM_A459_MK2206_30min_R2 2 FQPSSVLSPYER 12 0 Q7Z6J9;J3QLM6 Q7Z6J9 TSEN54 tRNA-splicing endonuclease subunit Sen54 1 FQPSSVLS(1)PYER;FQPS(0.001)S(0.004)VLS(0.995)PYER 90.689 0.024065 4250000 21400 29902 24732 27977 29354 31566 30723 20067.6 22635 24247 TRUE FALSE 23038.40045 28417.11016 25556.55254 25691.18961 28201.41447 32767.26625 26689.0332 22690.50422 24603.75139 23455.82238 0.98220391 1.211516258 1.089561139 1.095301166 1.202320431 1.396977933 1.137842569 0.967371933 1.048940045 1 14.51765846 -7.675143078 5.940831556 1.006954652 1.16863776 0.321236178 0.102569242 0.251804709 13.61671733 0.052149662 0.02943291 2.11E-08 7.675143078 0.161683108 FQS(ph)LGVAFYR ddPTM_A459_MK2206_30min_R1 1 FQSLGVAFYR 10 0 C9IZZ0;C9J592;C9J8S3;P51149 C9IZZ0 RAB7A Ras-related protein Rab-7a 1 FQS(1)LGVAFYR 97.779 0.020266 7817800 2371.5 1354.2 1288.8 1272.1 1587 1340.3 1524.4 1221.3 1408.9 1408.6 TRUE FALSE 2169.791472 1266.041334 1201.319847 1370.077362 1523.786429 1416.186628 1422.710057 1210.622303 1555.360197 1583.108002 1.370589668 0.799718864 0.758836318 0.865435182 0.962528411 0.894560968 0.898681616 0.764712389 0.982472576 1 10.62854397 -4.756308931 24.9867242 0.872674795 1.370590445 0.761385131 0.082150113 75.04687251 365458.5351 0.020348815 0.166606187 1.75E-05 4.756308931 0.49791565 FQS(ph)LGVAFYR ddPTM_A459_MK2206_30min_R2 1 FQSLGVAFYR 10 0 C9IZZ0;C9J592;C9J8S3;P51149 C9IZZ0 RAB7A Ras-related protein Rab-7a 1 FQS(1)LGVAFYR 96.23 0.021921 2207900 25690 10453 9084.1 10286 12079 9126.6 13907 7801.4 10506 10776 TRUE FALSE 27656.84615 9933.91922 9386.95936 9445.600897 11604.71777 9473.919158 12080.99419 8821.069766 11419.79289 10424.38 2.653092668 0.952950604 0.90048131 0.906106732 1.113228582 0.908823274 1.158917287 0.846196106 1.095488929 1 13.34767396 -4.760798019 24.99999941 0.983760264 2.653094581 0.962017922 0.099319333 2.477868724 96512.53228 0.023178188 0.13422454 1.73E-05 4.760798019 1.669334316 FQS(ph)MPDGFVFK ddPTM_A459_MK2206_30min_R2 1 FQSMPDGFVFK 11 0 P30305-3 P30305-3 CDC25B M-phase inducer phosphatase 2 1 FQS(1)MPDGFVFK 86.463 0.033429 2657900 8558.4 9360.1 8961.9 12234 12583 8198.7 13332 9909.7 11363 13130 TRUE FALSE 9213.637684 8895.291045 9260.685273 11234.44307 12088.9282 8510.707274 11581.49239 11204.93182 12351.3332 12701.56918 0.725393655 0.700330087 0.729097732 0.884492531 0.951766512 0.670051641 0.911815873 0.882169097 0.972425771 1 13.63271912 -2.301660491 0.131337963 1.063177054 3.78E-12 0.540012062 0.079757503 55.4178774 0.598552844 0.461029337 10.59638783 0.004992746 2.301660491 -1.063177054 FQSDSSSYPTVDSNS(ph)LLGQSR ddPTM_A459_MK2206_30min_R2 1 FQSDSSSYPTVDSNSLLGQSR 21 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 FQSDSSSYPT(0.008)VDS(0.011)NS(0.98)LLGQSR 149.18 2.23E-06 5640000 7622.9 12650 14427 17739 14450 17721 14260 11290 13653 11105 TRUE FALSE 8206.515085 12021.81939 14907.98898 16289.66696 13882.62039 18395.38507 12387.64487 12765.64176 14840.51326 10742.64476 0.763919432 1.119074461 1.387739175 1.516355359 1.292290745 1.71237023 1.153128038 1.188314614 1.381458067 1 13.3910616 -4.876904346 2.515230401 1.347473758 0.69998001 0.457817915 0.187996036 0.354194595 3.376092045 0.048720744 0.456615631 1.33E-05 4.876904346 -0.647493748 FQSPQIQATIS(ph)PPLQPK ddPTM_A459_MK2206_30min_R1 2 FQSPQIQATISPPLQPK 17 0 A0A087WYN9;Q7Z478 A0A087WYN9 DHX29 ATP-dependent RNA helicase DHX29 1 FQSPQIQAT(0.001)IS(0.999)PPLQPK;FQSPQIQAT(0.226)IS(0.774)PPLQPK 268.42 1.70E-51 168792000 8619.5 8736.4 9179.6 7508.2 8373.5 7219.5 8084.5 8351.4 7284.3 6590.2 TRUE FALSE 7886.366262 8167.658772 8556.514328 8086.482865 8039.965764 7628.261851 7545.197756 8278.38459 8041.529052 7406.643729 1.064769219 1.102747624 1.155248536 1.091787746 1.08550729 1.029921531 1.018706722 1.11769715 1.085718356 1 12.85460423 -6.440189493 3.006428742 1.055974466 1.107359095 0.297214016 0.037929055 0.377981599 6.637460974 0.013328049 0.014934344 3.63E-07 6.440189493 0.051384628 FQSPQIQATIS(ph)PPLQPK ddPTM_A459_MK2206_30min_R2 3 FQSPQIQATISPPLQPK 17 0 A0A087WYN9;Q7Z478 A0A087WYN9 DHX29 ATP-dependent RNA helicase DHX29 1 FQSPQIQAT(0.068)IS(0.932)PPLQPK;FQSPQIQAT(0.026)IS(0.974)PPLQPK;FQS(0.014)PQIQAT(0.055)IS(0.931)PPLQPK 197.1 7.90E-08 206045000 81017 102446 89546 98899 89969 88660 102519 70332.2 80966.3 91753 TRUE FALSE 87219.72381 97358.68061 92531.41895 90818.63534 86436.365 92034.01843 89058.13215 79524.86003 88008.60242 88759.10712 0.982656616 1.096886661 1.042500561 1.023203571 0.973830943 1.036896623 1.00336895 0.895962821 0.991544477 1 16.43760753 -6.767329252 0.843818459 0.96371232 1.043773747 0.265881589 0.0426392 0.726874182 1.127001278 0.027938873 0.026181097 1.71E-07 6.767329252 0.080061427 FQSQADQDQQASGLQS(ph)PPSR ddPTM_A459_MK2206_30min_R1 2 FQSQADQDQQASGLQSPPSR 20 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 FQSQADQDQQASGLQS(1)PPSR;FQSQADQDQQAS(0.001)GLQS(0.999)PPSR 184.68 4.28E-14 11057400 1561.01 1801.89 1807.15 1242.29 2119.1 2000.68 2093.51 1509.91 1781.42 1376.27 TRUE FALSE 1428.237902 1684.586633 1684.485693 1337.971391 2034.69176 2113.956773 1953.855768 1496.709016 1966.604984 1546.772718 0.923366365 1.089097716 1.089032457 0.865008398 1.315443269 1.366688686 1.263182202 0.967633447 1.271424664 1 10.59504551 -6.26710314 24.98972931 1.207531055 1.00554607 0.351109128 0.136099547 563.3486596 2485611.589 0.043069688 0.05018001 5.41E-07 6.26710314 -0.201984985 FQSQADQDQQASGLQS(ph)PPSR ddPTM_A459_MK2206_30min_R2 1 FQSQADQDQQASGLQSPPSR 20 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 FQSQADQDQQAS(0.013)GLQS(0.984)PPS(0.003)R 165.41 3.78E-09 13328000 18607 15336 16529 21634 13592 18234 22267 15609 14714 17779 TRUE FALSE 20031.56623 14574.43654 17080.06861 19866.433 13058.30979 18927.90765 19343.31615 17649.14989 15993.79712 17198.87269 1.16470228 0.847406502 0.993092334 1.155100881 0.75925382 1.100531877 1.124685118 1.026180623 0.929932875 1 14.07002638 FQSSHHPTDITSLDQYVER ddPTM_A459_MK2206_30min_R2 1 FQSSHHPTDITSLDQYVER 19 0 P14625 P14625 HSP90B1 Endoplasmin 0 65.808 0.013196 4212400 5313.5 10910 9932.2 14951 19244 25415 14417 9128.5 10729 5806.1 FALSE TRUE 5720.305645 10368.22526 10263.33459 13729.45547 18488.38387 26382.18563 12524.03058 10321.62629 11662.18903 5616.647432 1.018455531 1.845981146 1.827306185 2.444421808 3.291711664 4.697141124 2.229805366 1.837684565 2.07636124 1 12.45549353 -5.520830097 1.834748116 2.662755002 1.354827661 0.176002547 0.940195099 0.622884844 4.065444818 0.299700801 0.829423577 3.01E-06 5.520830097 -1.307927341 FRDQDLAS(ph)CDR ddPTM_A459_MK2206_30min_R2 1 FRDQDLASCDR 11 1 Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 FRDQDLAS(1)CDR 122.46 0.015636 0 27236 21523 26397 31797 23440 24146 27952 23689 16686 27866 TRUE FALSE 29321.2091 20454.19912 27277.06281 29199.08339 22519.62782 25064.89295 24281.86882 26785.23364 18137.31812 26956.7347 1.08771368 0.758778811 1.011883045 1.083183246 0.835398948 0.929819328 0.900771888 0.993637914 0.672830679 1 14.71835813 -6.291918391 24.99318726 0.891080278 0.97109566 0.127479539 0.121496903 1742.354254 1428748.727 0.036757785 0.04168402 5.11E-07 6.291918391 0.080015383 FRDQDLASCDR ddPTM_A459_MK2206_30min_R2 2 FRDQDLASCDR 11 1 Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 0 ; 188.27 5.48E-05 19614700 45362 60947 55852 55364 54081 65000 64995 43585 56450 49793 FALSE TRUE 48834.9496 57920.46061 57714.0778 50840.5841 51957.5082 67473.62055 56461.07843 49281.70915 61359.91896 48168.25849 1.01384088 1.202461173 1.198176551 1.055478975 1.078666944 1.400790119 1.172163582 1.023115859 1.273866253 1 15.55579514 -4.751085381 24.52746288 1.160704699 1.013840491 0.116760277 0.116741141 773.143679 1831333.69 0.028781487 0.38963576 1.77E-05 4.751085381 -0.146864208 FRDQDLASCDRDR ddPTM_A459_MK2206_30min_R1 2 FRDQDLASCDRDR 13 2 Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 0 ; 106.26 0.0044529 32546000 2323 2040.26 1857.87 1773.32 2348.03 1914.52 2249.84 2316.3 1313.61 1165.46 FALSE TRUE 2125.416651 1907.438703 1731.762961 1909.901414 2254.502993 2022.918468 2099.757279 2296.048833 1450.16446 1309.845984 1.622646233 1.456231288 1.322111899 1.45811144 1.721197012 1.544394145 1.603056623 1.752915123 1.107125936 1 10.35518147 -8.385772055 5.371147594 1.009223518 1.550554328 0.733963589 0.122405828 0.121510091 4.511989431 0.127367979 0.033145477 4.11E-09 8.385772055 0.54133081 FRDQDLASCDRDR ddPTM_A459_MK2206_30min_R2 1 FRDQDLASCDRDR 13 2 Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 0 92.112 0.01198 11242000 8776.4 10289 12110 9820.6 11546 12213 8219.2 8301.9 9650 9749.7 FALSE TRUE 9448.327932 9778.063222 12513.74136 9018.225565 11092.64603 12677.77427 7140.009167 9386.986835 10489.33956 9431.568087 1.001776994 1.036737808 1.326793301 0.956174571 1.176118957 1.344185204 0.757033094 0.995273188 1.112152238 1 13.20328194 -7.261069053 24.99999203 0.96572074 1.13732659 0.258659251 0.144409831 50.51525142 3410400.713 0.058140804 0.042231004 5.48E-08 7.261069053 0.17160585 FRELAEEAAR ddPTM_A459_MK2206_30min_R1 2 FRELAEEAAR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 128.51 0.0087497 8815400 5514.2 5399.1 5502.5 5785.8 6098.8 5388.5 4921.8 5723.8 4122.3 2928.2 FALSE TRUE 5045.188334 5047.617609 5129.005631 6231.423319 5855.871882 5693.592213 4593.475702 5673.75742 4550.827837 3290.967523 1.533041058 1.533779223 1.55850995 1.893492803 1.779376989 1.730066363 1.395782751 1.724039323 1.382823685 1 11.68429607 -8.578423939 2.852695281 1.000192728 1.644531158 0.677056722 0.137809387 0.187229079 3.791732764 0.141727681 0.037920002 2.64E-09 8.578423939 0.64433843 FRELAEEAAR ddPTM_A459_MK2206_30min_R2 1 FRELAEEAAR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 112.85 0.022515 2537900 6816.7 12903 10784 14366 14885 16365 12807 7876.3 13902 10633 FALSE TRUE 7338.591793 12262.25578 11143.53318 13192.25185 14300.54011 16987.78154 11125.42552 8905.759453 15111.17083 10286.04608 0.713451188 1.192125301 1.083364112 1.282538669 1.390285441 1.651536597 1.081603702 0.865809795 1.469094219 1 13.3284009 -4.431055012 1.582000575 1.245161226 3.54E-10 0.318848551 0.222700725 3.640736178 4.228009823 0.064493298 9.190187228 3.71E-05 4.431055012 -1.245161225 FRIDELEPR ddPTM_A459_MK2206_30min_R1 2 FRIDELEPR 9 1 F5H6X6;Q14697;Q14697-2 F5H6X6 GANAB Neutral alpha-glucosidase AB 0 ; 131.12 0.010372 6277700 3531.4 3698 3337 2964.8 3473.1 3492.6 3518.9 3349.7 3086.3 3020.9 FALSE TRUE 3231.035886 3457.259528 3110.493737 3193.14941 3334.759073 3690.347994 3284.160602 3320.413926 3407.131929 3395.151899 0.951661658 1.018293034 0.916157459 0.940502665 0.98221204 1.086946359 0.967308886 0.977986855 1.00352857 1 11.72926041 -6.523530101 24.99925733 1.006764781 0.958563097 0.279145136 0.03822299 32.84426444 1260507.688 0.012946907 0.01305626 3.00E-07 6.523530101 -0.048201684 FRIDELEPR ddPTM_A459_MK2206_30min_R2 1 FRIDELEPR 9 1 F5H6X6;Q14697;Q14697-2 F5H6X6 GANAB Neutral alpha-glucosidase AB 0 125.68 0.014049 4287800 34567 38963 37305 48950 36194 42507 39056 25123 36171 36488 FALSE TRUE 37213.4761 37028.15408 38548.73008 44950.62842 34772.8417 44124.63367 33927.90029 28406.66236 39317.0882 35297.39955 1.054283788 1.049033486 1.092112466 1.273482721 0.98513891 1.250081712 0.961201129 0.804780599 1.113880589 1 15.10727428 -7.393515192 9.979617311 0.952368822 1.114102203 0.299681418 0.109070191 0.443461994 33.5024656 0.043922495 0.029576474 4.04E-08 7.393515192 0.161733381 FRNS(ph)VEGLNQEIEIIIK ddPTM_A459_MK2206_30min_R1 2 FRNSVEGLNQEIEIIIK 17 1 Q6P1L5 Q6P1L5 FAM117B Protein FAM117B 1 FRNS(1)VEGLNQEIEIIIK;FRNS(1)VEGLNQEIEIIIK 178.22 4.75E-08 9336200 3841 4146.8 3746.5 3186.3 4528.5 3678.9 3759.4 3765.9 3715.7 3065.5 TRUE FALSE 3514.30278 3876.842566 3492.198018 3431.709378 4348.120256 3887.196139 3508.617285 3732.975133 4101.960312 3445.277283 1.020034816 1.125262859 1.013618856 0.996061883 1.26205234 1.128268008 1.018384588 1.083504991 1.190603825 1 11.75040438 FRPDMEEEEAK ddPTM_A459_MK2206_30min_R2 2 FRPDMEEEEAK 11 1 Q99436 Q99436 PSMB7 Proteasome subunit beta type-7 0 ; 136.7 0.0039283 9744500 50580 51381 43368 51758 50629 45610 59475 53027 45448 65117 FALSE TRUE 54452.44369 48829.49425 44813.86747 47529.20583 48641.05107 47345.72051 51665.86106 59957.81097 49400.98489 62992.23762 0.864431012 0.775166847 0.711418885 0.754524805 0.772175317 0.751611981 0.820194091 0.951828562 0.784239245 1 15.94288644 -8.458347091 0.569005211 0.993949368 0.763957389 0.529549159 0.060600599 0.681604689 0.531997227 0.064986841 0.029738632 3.48E-09 8.458347091 -0.229991979 FRS(ph)LTTAFFR ddPTM_A459_MK2206_30min_R1 1 FRSLTTAFFR 10 1 P51159-2;P51159;H3BUD9;H3BS49;H3BVH7;H3BN55;O00194 P51159-2 RAB27A;RAB27B Ras-related protein Rab-27A;Ras-related protein Rab-27B 1 FRS(1)LTTAFFR 82.831 0.017833 33161000 885.97 1009.2 1038.1 1005.9 608.67 737.06 822.6 804.2 336.86 480.76 TRUE FALSE 810.6135991 943.5008966 967.6366643 1083.374592 584.425385 778.7917002 767.7258549 797.1689642 371.8778025 540.3201784 1.500246764 1.746188527 1.790857908 2.005060399 1.08162791 1.441352242 1.420872079 1.475364045 0.688254515 1 9.07767075 -7.490324775 0.580030626 0.91388605 1.73496718 0.523762834 0.260258702 0.685344042 0.475705327 0.251289382 0.168185427 3.23E-08 7.490324775 0.821081131 FRTPS(ph)FLK ddPTM_A459_MK2206_30min_R2 1 FRTPSFLK 8 1 P35611;P35611-3;P35612;Q9UEY8-2;Q9UEY8 P35611;P35612;Q9UEY8-2 ADD1;ADD2;ADD3 Alpha-adducin;Beta-adducin;Gamma-adducin 1 FRT(0.088)PS(0.912)FLK 68.786 0.041695 29691000 60450 68346 59345 77276 64737 55182 65662 55469 45772 67100 TRUE FALSE 65078.09848 64952.03702 61323.53268 70962.30361 62195.1001 57281.98968 57040.50053 62718.98875 49753.16582 64910.5325 1.002581491 1.000639411 0.944739325 1.093232498 0.958166536 0.88247604 0.878755702 0.966237471 0.766488333 1 15.98616497 -6.566332695 5.021416427 0.896582899 1.007410005 0.382660295 0.066674323 0.198927394 11.58813719 0.021056813 0.021373352 2.71E-07 6.566332695 0.110827106 FRVEIS(ph)FHFEVTNHNIR ddPTM_A459_MK2206_30min_R1 1 FRVEISFHFEVTNHNIR 17 1 Q96BQ3;A6NCK2 Q96BQ3 TRIM43;TRIM43B Tripartite motif-containing protein 43;Tripartite motif-containing protein 43B 1 FRVEIS(1)FHFEVTNHNIR 63.212 0.027305 49115000 4124.8 3251.6 4137.9 3364.8 5078.1 3813.4 4008 3722.9 3055.4 3350.4 TRUE FALSE 3773.9641 3039.920249 3857.030877 3623.957479 4875.828524 4029.311413 3740.633633 3690.351078 3373.019764 3765.472846 1.00225503 0.807314346 1.024315148 0.962417637 1.294878153 1.070067845 0.993403428 0.980049845 0.895775883 1 11.87861533 -5.396926807 8.10514952 1.035233757 0.905110582 0.167204116 0.10882659 0.470809222 28.71662357 0.029930622 0.062532672 4.01E-06 5.396926807 -0.130123175 FS(ph)CDIEQLK ddPTM_A459_MK2206_30min_R2 2 FSCDIEQLK 9 0 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3 B8ZZZ7 SPATS2L SPATS2-like protein 1 FS(1)CDIEQLK;FS(1)CDIEQLK 99.5 0.018752 3540100 13012.2 18101 13453.8 14875.7 19167.1 9837.5 15329.2 12258.8 9986.9 14628.3 TRUE FALSE 14008.42404 17202.13066 13902.34298 13660.30772 18414.50335 10211.87296 13316.45763 13861.06725 10855.54251 14150.97977 0.989926087 1.215614109 0.982429712 0.965325931 1.301288225 0.721637167 0.941027253 0.979512901 0.767123032 1 13.78861432 -6.770994046 24.99999798 0.884277618 1.084840125 0.399971529 0.127902723 216.225853 565756.1226 0.043462335 0.038814549 1.69E-07 6.770994046 0.200562507 FS(ph)DSEGEETVPEPR ddPTM_A459_MK2206_30min_R2 2 FSDSEGEETVPEPR 14 0 A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286 A0A1B0GWH8 CLN3 Battenin 1 FS(0.977)DS(0.023)EGEETVPEPR;FS(0.951)DS(0.049)EGEETVPEPR 228.93 3.19E-13 11581000 29233 22409.1 21738.8 20927.8 24488.5 22809.2 29434 17911.9 28163 27010 TRUE FALSE 31471.10096 21296.29668 22463.56074 19217.9318 23526.95845 23677.22009 25569.28044 20253.04683 30612.56683 26128.66591 1.20446643 0.815054881 0.859728576 0.735511406 0.900427084 0.906177918 0.97859112 0.775127475 1.171608491 1 14.67334584 -8.266782053 24.99198654 1.085804247 0.890691522 0.255667712 0.128590795 621.0461911 2905082.827 0.108413576 0.031192099 5.41E-09 8.266782053 -0.195112725 FS(ph)GGFGAR ddPTM_A459_MK2206_30min_R2 1 FSGGFGAR 8 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;F6S8Q4;A0A0D9SFB3;A0A2R8Y7T2;O15523;O15523-2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 1 FS(1)GGFGAR 93.598 0.023839 70997000 55468 58446 66747 56692 52539 49920 70575 39919 46226 54319 TRUE FALSE 59714.67273 55543.65663 68972.31167 52060.08225 50476.05487 51819.74058 61308.41772 45136.55036 50246.65392 52546.57548 1.136414166 1.05703666 1.312593847 0.990741676 0.960596469 0.986167797 1.166744306 0.858981769 0.9562308 1 15.68130912 -5.863789153 14.24099284 0.988626389 1.157491627 0.443468985 0.092248145 0.692058626 92.0107404 0.026088009 0.038699788 1.37E-06 5.863789153 0.168865237 FS(ph)PDSQYIDNR ddPTM_A459_MK2206_30min_R1 2 FSPDSQYIDNR 11 0 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 FS(0.97)PDS(0.007)QY(0.022)IDNR;FS(0.995)PDS(0.005)QYIDNR 188.09 1.94E-05 93914000 4140.9 4365.1 3459.8 3109.9 3227.1 3483.4 4319.1 3493.9 4416.5 5237.1 TRUE FALSE 3788.69471 4080.931197 3224.958416 3349.425037 3098.557774 3680.627098 4030.98072 3463.353201 4875.61098 5885.911486 0.6436887 0.693338866 0.54791147 0.569058003 0.526436352 0.625328313 0.684852419 0.588414081 0.828352752 1 12.52305013 -8.475002645 2.566116895 0.999555457 0.608230159 0.851965396 0.053004474 0.09776843 1.429519495 0.054686269 0.014864283 3.35E-09 8.475002645 -0.391325298 FS(ph)PDSQYIDNR ddPTM_A459_MK2206_30min_R2 4 FSPDSQYIDNR 11 0 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 FS(1)PDSQYIDNR;FS(1)PDSQYIDNR;FS(1)PDSQYIDNR;FS(0.999)PDSQY(0.001)IDNR 201.76 1.86E-05 131889800 127650 122777 119646 132442 117261 102780 137768 91611 84260 130146 TRUE FALSE 137422.9821 116680.0727 123634.9379 121621.0649 112656.744 106691.3649 119678.8961 103584.8722 91588.78249 125899.3467 1.091530542 0.926772662 0.982014134 0.966018237 0.894815954 0.847433825 0.950591876 0.82275941 0.727476233 1 16.94191127 -5.177404191 0.511852166 0.853457533 1.124617178 0.385714944 0.076464243 3.239913794 0.871565992 0.050253155 0.502790152 6.65E-06 5.177404191 0.271159645 FS(ph)PEVPGQK ddPTM_A459_MK2206_30min_R1 1 FSPEVPGQK 9 0 P46821;D6RA32;D6RGJ3 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 FS(1)PEVPGQK 88.134 0.031598 5596600 5001.7 5091.3 4949 4428.9 4066.2 3938.1 4858.9 4344.9 5063.8 5253.3 TRUE FALSE 4576.27915 4759.855445 4613.075669 4770.014645 3904.234644 4161.071819 4534.771647 4306.912997 5590.200131 5904.118464 0.77509948 0.806192402 0.781331827 0.807913099 0.661273087 0.704774446 0.768069217 0.729476047 0.946830617 1 12.52750595 -8.350203792 4.090916077 0.994972267 0.754260313 0.801463323 0.043861093 0.10241649 2.931225532 0.045647644 0.012146736 4.46E-09 8.350203792 -0.240711955 FS(ph)PEVPGQK ddPTM_A459_MK2206_30min_R2 2 FSPEVPGQK 9 0 P46821;D6RA32;D6RGJ3 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 FS(1)PEVPGQK;FS(1)PEVPGQK 94.363 0.023342 14765400 194516 196496 175109 198775 196826 150196 209310 173516 150226 214810 TRUE FALSE 209408.2945 186738.2944 180947.0467 182534.4467 189097.6223 155911.814 181827.3456 196195.137 163292.3859 207800.7673 1.007735906 0.898641024 0.870771793 0.87841084 0.909994822 0.750294698 0.875008057 0.944150205 0.785812238 1 17.66484146 -4.720762554 2.461612805 0.871476275 1.052600273 0.248909204 0.067369006 0.909142284 5.953842266 0.016750794 0.37478913 1.90E-05 4.720762554 0.181123997 FS(ph)PGAPGGSGSQPNQK ddPTM_A459_MK2206_30min_R2 5 FSPGAPGGSGSQPNQK 16 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FS(0.991)PGAPGGS(0.004)GS(0.004)QPNQK;FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK 249.86 2.21E-29 277053100 234978 173054 168380 182437 171282 128234 216266 167150 119546 210157 TRUE FALSE 252968.0963 164460.39 173993.7052 167531.3135 164556.6081 133114.0347 187870.0144 188997.0789 129943.895 203299.5943 1.24431186 0.80895582 0.855848757 0.824061229 0.809429102 0.654767833 0.924104227 0.929648087 0.639174394 1 17.63324781 -4.760281183 24.9996366 0.822994588 1.244312363 0.573011825 0.107926273 20.24821176 436868.6568 0.025687162 0.153952073 1.74E-05 4.760281183 0.421317775 FS(ph)PPPVGGQGK ddPTM_A459_MK2206_30min_R2 4 FSPPPVGGQGK 11 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 FS(1)PPPVGGQGK;FS(1)PPPVGGQGK;FS(1)PPPVGGQGK;FS(1)PPPVGGQGK 110.98 0.0085117 39808700 377616 323653 331003 333936 248120 211469 322139 281965 206254 308069 TRUE FALSE 406526.5713 307580.8627 342038.4748 306652.3606 238377.5621 219516.601 279841.7623 318818.7936 224193.6001 298016.7338 1.364106526 1.03209259 1.147715669 1.028976986 0.799879789 0.736591527 0.939013588 1.06980165 0.752285274 1 18.18503382 -5.942404378 2.791927149 0.882461721 1.170864967 0.533852152 0.124771818 0.223736002 3.541237222 0.038196104 0.059530713 1.14E-06 5.942404378 0.288403246 FS(ph)PTMGR ddPTM_A459_MK2206_30min_R1 2 FSPTMGR 7 0 P78344-2;P78344;H0Y3P2;D3DQV9;H0YCH5 P78344-2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 FS(0.63)PT(0.37)MGR;FS(0.611)PT(0.389)MGR 88.177 0.03262 132918000 12466.7 11490.6 11838.5 7816 9804.7 10766.7 14361.2 9465.3 14590 18530 TRUE FALSE 11406.3417 10742.55985 11034.9356 8417.989674 9414.158037 11376.30125 13403.19055 9382.54588 16106.68271 20825.63629 0.547706756 0.515833452 0.529872675 0.404212844 0.452046598 0.546264282 0.643590926 0.450528654 0.773406511 1 14.34607296 -8.496120965 3.105651608 0.998906739 0.512213866 0.859221092 0.063927538 0.080183621 1.811549821 0.064931736 0.017300279 3.19E-09 8.496120965 -0.486692873 FS(ph)PTMGR ddPTM_A459_MK2206_30min_R2 3 FSPTMGR 7 0 P78344-2;P78344;H0Y3P2;D3DQV9;H0YCH5 P78344-2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 FS(0.637)PT(0.363)MGR;FS(0.63)PT(0.37)MGR;FS(0.63)PT(0.37)MGR 96.034 0.023406 197679500 253698 218357 208670 240925 202063 185230 300228 217608 163472 245122 TRUE FALSE 273121.3139 207513.7089 215626.9537 221240.6568 194128.9913 192279.0574 260807.703 246050.1128 177690.4991 237123.6892 1.151809483 0.875128544 0.909343787 0.933017943 0.818682401 0.810880845 1.09988042 1.037644588 0.749357855 1 17.85528027 -4.755342097 24.9261537 0.915976843 1.151809885 0.322811967 0.102936736 248.1958888 1014541.062 0.026168166 0.234076991 1.76E-05 4.755342097 0.235833042 FS(ph)PVLGR ddPTM_A459_MK2206_30min_R1 1 FSPVLGR 7 0 F8VZ44;Q9NRG9-2;Q9NRG9 F8VZ44 AAAS Aladin 1 FS(1)PVLGR 80.219 0.0453 33650000 5880.4 6464.9 7230.5 5453.6 4979.1 5359.9 6297.4 6024.4 5554.3 5678.6 TRUE FALSE 5380.241101 6044.033835 6739.713805 5873.637217 4780.771904 5663.372906 5877.311936 5971.729306 6131.689361 6382.107839 0.843019459 0.947027845 1.05603258 0.920328732 0.749089803 0.887382828 0.920904517 0.93569859 0.960762418 1 12.63981727 -8.289185653 1.480682751 0.996919345 0.905036077 0.159032867 0.073193271 0.850672803 3.646928084 0.076213036 0.023269405 5.14E-09 8.289185653 -0.091883268 FS(ph)PVLGR ddPTM_A459_MK2206_30min_R2 4 FSPVLGR 7 0 F8VZ44;Q9NRG9-2;Q9NRG9 F8VZ44 AAAS Aladin 1 FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR 97.635 0.022374 199062000 230500 272849 251692 286312 258345 244607 275813 209336 221746 232857 TRUE FALSE 248147.2572 259299.7154 260083.2857 262919.3937 248201.0772 253915.6908 239598.4218 236696.934 241033.0663 225258.8952 1.101609138 1.151118651 1.154597182 1.16718762 1.101848063 1.127217154 1.063657982 1.050777301 1.070026851 1 17.78122455 -7.603644178 0.66663685 1.01345329 1.14630927 0.779418911 0.023708617 0.327083543 0.285260857 0.022023943 0.012203522 2.49E-08 7.603644178 0.13285598 FS(ph)PVTPK ddPTM_A459_MK2206_30min_R2 4 FSPVTPK 7 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FS(0.998)PVT(0.002)PK;FS(0.985)PVT(0.015)PK;FS(0.999)PVT(0.001)PK;FS(1)PVTPK 101.46 0.019909 558510000 3282380 2860540 3057650 2835980 2930820 2164980 3515240 2724940 2189400 3162110 TRUE FALSE 3533681.537 2718489.743 3159590.525 2604271.362 2815741.281 2247369.831 3053684.765 3081099.014 2379830.054 3058930.61 1.155201601 0.888705921 1.032906897 0.851366603 0.920498579 0.734691341 0.998285072 1.007247109 0.777994129 1 21.54459595 -2.539879742 1.468177353 0.907270907 199.9624695 0.346431172 0.097555816 1231.573001 4.338574704 0.026280708 823977.4658 0.00288483 2.539879742 199.0551986 FS(ph)RLQS(ph)LPLNLCQTS(ph)PL ddPTM_A459_MK2206_30min_R1 1 FSRLQSLPLNLCQTSPL 17 1 H7C184 H7C184 NCOR2 3 FS(1)RLQS(1)LPLNLCQT(0.268)S(0.732)PL 82.865 0.043035 3470300 1495 1484.9 1498.9 1596.3 1651.3 1148.4 1398.6 1676.8 1227.2 1279.2 TRUE FALSE 1367.842399 1388.23274 1397.158844 1719.247303 1585.525224 1213.421416 1305.301946 1662.139914 1354.771832 1437.676953 0.95142542 0.965608259 0.971816958 1.195850917 1.102838312 0.844015349 0.907924373 1.156128928 0.94233397 1 10.48952382 -5.550346582 24.99421657 1.024071139 0.961065389 0.063366166 0.10316779 648.0805687 589714.4657 0.029976166 0.051921439 2.82E-06 5.550346582 -0.063005751 FS(ph)SKNQLK ddPTM_A459_MK2206_30min_R1 2 FSSKNQLK 8 1 H7C5R8;Q460N5-5;Q460N5-3;Q460N5-4;Q460N5-1;Q460N5 H7C5R8 PARP14 Poly [ADP-ribose] polymerase 14 1 FS(0.5)S(0.5)KNQLK;FS(0.5)S(0.5)KNQLK 118.74 0.0045198 8188800 3292.3 3885.4 3448.1 3604.7 2964.5 2397.01 3353.6 2944.9 1717.82 2571.94 TRUE FALSE 3012.272596 3632.459754 3214.052579 3882.334619 2846.417688 2532.726635 3129.887463 2919.15305 1896.393536 2890.571344 1.042102836 1.256658052 1.111909099 1.343102853 0.984724938 0.876202776 1.082791978 1.009887909 0.656061834 1 11.49713897 -6.430891313 6.81809391 0.934884137 1.187021443 0.481145823 0.129953553 0.227990748 14.4292611 0.039796373 0.045033848 3.71E-07 6.430891313 0.252137306 FS(ph)SPIVK ddPTM_A459_MK2206_30min_R1 1 FSSPIVK 7 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 FS(0.5)S(0.5)PIVK 106.68 0.017017 35403000 15580 13297 13659 11424 11814 9901.2 11339 11304 10617 9716.4 TRUE FALSE 14254.83919 12431.36288 12731.86514 12303.87846 11343.42336 10461.79739 10582.596 11205.17032 11720.67514 10920.14099 1.30537135 1.138388497 1.165906663 1.12671425 1.038761622 0.958027685 0.969089686 1.02610125 1.073308042 1 13.41470386 -5.457531386 0.762951052 1.001973851 1.301919406 0.795530066 0.045666543 0.60599421 0.496788389 0.02220909 0.133160373 3.49E-06 5.457531386 0.299945556 FS(ph)SPIVK ddPTM_A459_MK2206_30min_R2 1 FSSPIVK 7 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 FS(0.5)S(0.5)PIVK 120.87 0.0091095 25206000 283990 272040 249730 281480 277950 218710 286930 188170 213820 277040 TRUE FALSE 305732.4928 258530.8892 258055.8736 258482.1836 267036.2864 227033.1623 249255.7463 212764.4651 232417.6771 268000.2075 1.140792 0.96466675 0.962894305 0.964485013 0.996403282 0.847138009 0.930058035 0.793896643 0.867229467 1 18.03187459 -1.522878745 0.460487808 0.886794215 6.449016142 0.529697319 0.062755364 71.30995236 0.838527554 0.038308005 375.3813374 0.03 1.522878745 5.562221927 FS(ph)SPTEELDYR ddPTM_A459_MK2206_30min_R1 1 FSSPTEELDYR 11 0 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 FS(0.5)S(0.5)PTEELDYR 225.55 1.54E-06 28318000 2957.3 2445.8 2104.8 1933.3 2758.9 1935.9 2595.2 2337.1 2014.2 1627.9 TRUE FALSE 2705.766106 2286.577975 1961.93204 2082.203101 2649.007171 2045.508985 2422.078943 2316.666981 2223.583298 1829.576542 1.478902928 1.249785359 1.072342149 1.138079251 1.447879938 1.118023181 1.323846741 1.266231244 1.215354071 1 10.83729406 -8.743315308 3.331737442 1.000014378 1.254144382 0.277468724 0.125757783 2.365335792 34.2039644 0.121395297 0.032063631 1.81E-09 8.743315308 0.254130004 FS(ph)SPTEELDYR ddPTM_A459_MK2206_30min_R2 4 FSSPTEELDYR 11 0 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 FS(0.497)S(0.497)PT(0.006)EELDYR;FS(0.497)S(0.497)PT(0.007)EELDYR;FS(0.5)S(0.5)PTEELDYR;FS(0.5)S(0.5)PTEELDYR 264.3 2.13E-22 146231000 347410 366165 347137 411189 353862 345164 385243 310475 293674 374909 TRUE FALSE 374007.9767 347981.7786 358710.3743 377593.5434 339967.5999 358299.4579 334660.1313 351055.1485 319217.2337 362675.75 1.031246166 0.959484549 0.989066333 1.041132591 0.937387184 0.98793332 0.922752986 0.967958703 0.880172533 1 18.46832076 -6.283714877 24.65010885 0.948362956 1.000809991 0.338998208 0.038000584 808.2180055 894373.0363 0.011345964 0.012876536 5.20E-07 6.283714877 0.052447035 FS(ph)YGQPLILTFR ddPTM_A459_MK2206_30min_R1 1 FSYGQPLILTFR 12 0 Q9Y6N6 Q9Y6N6 LAMC3 Laminin subunit gamma-3 1 FS(0.994)Y(0.006)GQPLILTFR 77.124 0.046449 18152000 3029.7 3027.6 2219.2 2288.5 3115.1 2963.4 4077.9 3199.5 4143.2 3191.3 TRUE FALSE 2772.008105 2830.50269 2068.566887 2464.760667 2991.018971 3131.185147 3805.870732 3171.527109 4573.900467 3586.662337 0.772865646 0.789174565 0.576738676 0.687201759 0.833928229 0.873008065 1.061117656 0.884255838 1.275252599 1 11.80842622 -6.964117306 1.199465179 1.069198303 0.70384317 0.679145804 0.106615315 0.275024616 0.815881924 0.059186252 0.044101689 1.09E-07 6.964117306 -0.365355133 FSAS(ph)SGGGGSR ddPTM_A459_MK2206_30min_R2 4 FSASSGGGGSR 11 0 P78344-2;P78344;H0Y3P2;D3DQV9;H0YCH5;H0YD77;H0YD99;H0YEN8;H0YDC0;H0YCF8;H0YEC5 P78344-2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 FS(0.01)AS(0.495)S(0.495)GGGGSR;FSAS(0.5)S(0.5)GGGGSR;FS(0.012)AS(0.494)S(0.494)GGGGSR;FS(0.004)AS(0.498)S(0.498)GGGGSR 158.06 0.00056835 85562000 151567 165755 148713 163014 178652 178452 182919 151192 161544 146639 TRUE FALSE 163171.0861 157523.8477 153671.0172 149695.2347 171637.2248 185243.1159 158901.5156 170953.3135 175594.8051 141854.1814 1.150273361 1.110463196 1.083302696 1.055275447 1.209955343 1.305869972 1.120175056 1.205134116 1.237854276 1 17.11404915 -6.272026204 24.80512931 1.193407275 1.099407856 0.185183573 0.079196372 896.1763426 2099751.816 0.023631533 0.027052554 5.35E-07 6.272026204 -0.093999419 FSASS(ph)GGGGSR ddPTM_A459_MK2206_30min_R2 1 FSASSGGGGSR 11 0 P78344-2;P78344;H0Y3P2;D3DQV9;H0YCH5;H0YD77;H0YD99;H0YEN8;H0YDC0;H0YCF8;H0YEC5 P78344-2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 FS(0.002)AS(0.159)S(0.839)GGGGSR 102.05 0.014669 9871600 39023 47906 47103 45940 47888 43900 52003 38853 48273 50215 TRUE FALSE 42010.63088 45527.0577 48673.39051 42186.55505 46007.6765 45570.64526 45174.94363 43931.2205 52471.69828 48576.48866 0.864834656 0.937224138 1.00199483 0.868456247 0.9471182 0.938121435 0.929975486 0.904372088 1.080187138 1 15.56797059 -8.255934493 24.9987795 1.040093573 0.926639384 0.554623305 0.041555693 297.3130181 1350172.246 0.028858585 0.010206739 5.55E-09 8.255934493 -0.113454189 FSASSGGGGS(ph)R ddPTM_A459_MK2206_30min_R1 1 FSASSGGGGSR 11 0 P78344-2;P78344;H0Y3P2;D3DQV9;H0YCH5;H0YD77;H0YD99;H0YEN8;H0YDC0;H0YCF8;H0YEC5 P78344-2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 FS(0.001)AS(0.174)S(0.174)GGGGS(0.65)R 106.4 0.011142 20043000 2781.2 2970.3 2655.3 2597.5 3281.2 2946.2 3264.3 3212.8 2041.1 2572.1 TRUE FALSE 2544.644335 2776.93293 2475.065634 2797.5599 3150.502856 3113.011298 3046.544503 3184.710828 2253.279649 2890.751166 0.880270971 0.960626761 0.856201552 0.967762266 1.089856122 1.076886636 1.053893721 1.101689715 0.779478938 1 11.49722871 -5.9971712 7.699642529 1.027156743 0.905984903 0.251188952 0.089936404 0.162574402 75.17156061 0.025424266 0.036229479 1.01E-06 5.9971712 -0.12117184 FSCPPNFTAKPPASES(ph)PR ddPTM_A459_MK2206_30min_R1 1 FSCPPNFTAKPPASESPR 18 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 FSCPPNFTAKPPAS(0.004)ES(0.996)PR 153.25 4.09E-05 21754000 1407.4 1624.6 1440.6 1587 1765.1 1368.5 1422.8 1211.6 1433.6 1039.5 TRUE FALSE 1287.693239 1518.838245 1342.816086 1709.231015 1694.792329 1445.983287 1327.887608 1201.007109 1582.62785 1168.281108 1.102211814 1.300062318 1.149394676 1.463030604 1.45067169 1.237701507 1.136616521 1.028012095 1.354663565 1 10.19017174 -7.140019025 4.108800321 1.13263118 1.298451827 0.235741597 0.137714346 0.362804755 10.36763994 0.05570069 0.042495082 7.24E-08 7.140019025 0.165820647 FSCPPNFTAKPPASES(ph)PR ddPTM_A459_MK2206_30min_R2 2 FSCPPNFTAKPPASESPR 18 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 FSCPPNFTAKPPAS(0.488)ES(0.512)PR;FSCPPNFTAKPPAS(0.1)ES(0.9)PR 81.224 0.0058341 44822000 40294 49802 48997 55833 58269 45079 59044 53139 50525 41840 TRUE FALSE 43378.93962 47328.9051 50630.53553 51271.2653 55981.06628 46794.51293 51291.45188 60084.44975 54919.57317 40474.76423 1.071752744 1.169343565 1.250916132 1.266746485 1.383110374 1.15614047 1.267245229 1.484491656 1.356884326 1 15.30473506 -4.902568133 1.214855191 1.29438194 0.998015982 0.19862627 0.124500656 1.790052381 2.633440447 0.037882664 0.636329883 1.25E-05 4.902568133 -0.296365957 FSEGVLQS(ph)PSQDQEK ddPTM_A459_MK2206_30min_R1 4 FSEGVLQSPSQDQEK 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 FSEGVLQS(0.95)PS(0.05)QDQEK;FS(0.021)EGVLQS(0.945)PS(0.034)QDQEK;FS(0.024)EGVLQS(0.974)PS(0.002)QDQEK;FSEGVLQS(0.812)PS(0.188)QDQEK 270.78 5.82E-45 65506000 17901.7 17597.1 17765.7 16528 16096.3 14747.7 17426 17274.9 16527.3 16493.8 TRUE FALSE 16379.06641 16451.52559 16559.81378 17800.98942 15455.15029 15582.70203 16263.54334 17123.86737 18245.37198 18537.17647 0.883579354 0.887488212 0.893329888 0.960285913 0.8337381 0.840618961 0.877347387 0.923758125 0.984258418 1 14.17813389 -8.145483428 2.362991228 0.998191392 0.882653897 0.645349543 0.032337889 0.207812227 2.070644133 0.030869281 0.009486625 7.15E-09 8.145483428 -0.115537495 FSEGVLQS(ph)PSQDQEK ddPTM_A459_MK2206_30min_R2 4 FSEGVLQSPSQDQEK 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 FS(0.005)EGVLQS(0.981)PS(0.014)QDQEK;FSEGVLQS(0.996)PS(0.004)QDQEK;FS(0.28)EGVLQS(0.715)PS(0.005)QDQEK;FS(0.296)EGVLQS(0.648)PS(0.056)QDQEK 201.04 1.70E-05 61529500 274298 239877 239164 236880 293438 202725 310860 204044 200214 289509 TRUE FALSE 295298.4658 227965.057 247137.6084 217526.1463 281916.1497 210439.8419 270043.7086 230713.2514 217628.2518 280062.345 1.054402604 0.813979676 0.882437831 0.776706152 1.006619257 0.751403556 0.964227121 0.823792471 0.777070733 1 18.0953885 -4.752476431 24.91684443 0.862309274 1.054402989 0.28069789 0.090160636 411.7804963 1144655.082 0.020535046 0.24311647 1.77E-05 4.752476431 0.192093715 FSFYGNLS(ph)PR ddPTM_A459_MK2206_30min_R2 2 FSFYGNLSPR 10 0 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 FSFYGNLS(1)PR;FSFYGNLS(1)PR 100.09 0.017801 8512200 44450 74299 49362 56397 73205 64287 66298 56555 70294 54568 TRUE FALSE 47853.12618 70609.4197 51007.70444 51789.18469 70330.60387 66733.48683 57592.99296 63946.93268 76408.04506 52787.45063 0.906524668 1.337617537 0.966284673 0.981088953 1.332335679 1.264192266 1.091035696 1.211404073 1.447466096 1 15.68790737 -6.257191649 24.99797739 1.230296673 1.062746408 0.229482403 0.157303124 596.9012961 3512772.26 0.046242081 0.057601579 5.53E-07 6.257191649 -0.167550265 FSGDLDDQTCR ddPTM_A459_MK2206_30min_R2 3 FSGDLDDQTCR 11 0 P05455 P05455 SSB Lupus La protein 0 ;; 187.16 0.00026688 64743000 279085 321426 295661 307735 303263 283110 311106 269542 260257 332452 FALSE TRUE 300451.9622 305464.4522 305518.1902 282592.0661 291355.3708 293883.9494 270257.4085 304772.0649 282893.6834 321604.1185 0.934229212 0.949815113 0.949982207 0.87869542 0.905944153 0.913806548 0.840341877 0.947662195 0.879633273 1 18.29492636 -5.741713546 24.97544534 0.904416881 0.945189492 0.12739397 0.04079548 407.6737137 516163.3281 0.010296853 0.017802809 1.81E-06 5.741713546 0.040772611 FSGEEGEIEDDES(ph)GTENR ddPTM_A459_MK2206_30min_R2 1 FSGEEGEIEDDESGTENR 18 0 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 FSGEEGEIEDDES(0.833)GT(0.167)ENR 224.64 5.32E-15 19558000 52026 32333 52061 50555 32386 32038 48479 28465 27343 52188 TRUE FALSE 56009.15056 30727.39024 53796.68776 46424.49478 31114.36291 33257.22854 42113.64907 32185.47323 29721.24472 50485.10983 1.109419208 0.608642634 1.065595141 0.919568065 0.61630772 0.658753218 0.834179607 0.637524081 0.588713084 1 15.62357032 -6.245834097 24.09231207 0.706844504 0.913136671 0.253284999 0.169101396 698.3191848 1078103.099 0.047666499 0.061288505 5.68E-07 6.245834097 0.206292167 FSGEEGEIEDDES(ph)GTENREEK ddPTM_A459_MK2206_30min_R1 2 FSGEEGEIEDDESGTENREEK 21 1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 FSGEEGEIEDDES(0.955)GT(0.045)ENREEK;FSGEEGEIEDDES(0.954)GT(0.046)ENREEK 113.23 4.85E-05 33784000 3208.8 3500.3 3470.5 2406.1 2154.37 2655.2 3915.6 2608.8 4661.2 5554.2 TRUE FALSE 2935.87471 3272.429834 3234.932129 2591.418239 2068.556881 2805.535129 3654.397468 2585.991537 5145.74842 6242.296228 0.470319671 0.524234947 0.51822791 0.41513862 0.331377558 0.449439602 0.585425192 0.414269276 0.824335826 1 12.60786111 -8.413090074 3.259200274 0.996570555 0.464407099 0.877322133 0.068407087 0.077211407 1.511802273 0.070237442 0.018758929 3.86E-09 8.413090074 -0.532163456 down FSGEEGEIEDDES(ph)GTENREEK ddPTM_A459_MK2206_30min_R2 1 FSGEEGEIEDDESGTENREEK 21 1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 FSGEEGEIEDDES(0.928)GT(0.072)ENREEK 69.639 0.0037387 43658000 111430 75441 80805 92300 58668 56362 86815 73808 46678 77651 TRUE FALSE 119961.1665 71694.70964 83498.99837 84758.79475 56364.39954 58506.8954 75416.08622 83454.95902 50737.96807 75117.25423 1.596985509 0.954437304 1.111582142 1.128353207 0.750352234 0.778874255 1.003978207 1.110995867 0.675450249 1 16.19685671 -2.341211432 1.140781547 0.928968255 199.9999866 0.605138967 0.15583937 338.9232906 1.919318858 0.047930184 174837.2145 0.00455815 2.341211432 199.0710184 FSGEEGEIEDDES(ph)GTENREEKDNIQPTTE ddPTM_A459_MK2206_30min_R1 3 FSGEEGEIEDDESGTENREEKDNIQPTTE 29 2 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 FSGEEGEIEDDES(0.499)GT(0.499)ENREEKDNIQPT(0.001)T(0.001)E;FSGEEGEIEDDES(0.481)GT(0.481)ENREEKDNIQPT(0.035)T(0.003)E;FSGEEGEIEDDES(0.5)GT(0.5)ENREEKDNIQPT(0.001)TE 60.86 0.0022877 75790200 8296.4 9449.4 9485.1 7668.7 7866.2 7944.4 8058.7 7899.5 9145.2 7250.6 TRUE FALSE 7590.747614 8834.242342 8841.277839 8259.344603 7552.872597 8394.205063 7521.118827 7830.435504 10095.87627 8148.859067 0.931510479 1.084107882 1.084971254 1.013558405 0.926862587 1.030108018 0.922965873 0.960924154 1.238931264 1 12.99238236 -8.232669716 24.99713286 1.119465758 0.997586662 0.289440016 0.078268239 783.4855947 680750.2134 0.052199317 0.019723279 5.85E-09 8.232669716 -0.121879097 FSGEEGEIEDDES(ph)GTENREEKDNIQPTTE ddPTM_A459_MK2206_30min_R2 4 FSGEEGEIEDDESGTENREEKDNIQPTTE 29 2 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 FSGEEGEIEDDES(0.819)GT(0.18)ENREEKDNIQPTTE;FS(0.001)GEEGEIEDDES(0.5)GT(0.5)ENREEKDNIQPTTE;FSGEEGEIEDDES(0.5)GT(0.5)ENREEKDNIQPTTE;FSGEEGEIEDDES(0.55)GT(0.45)ENREEKDNIQPTTE 77.675 5.25E-05 93592000 113928 148034 133656 143355 145869 116510 141058 115348 104131 149709 TRUE FALSE 122650.4153 140682.8468 138112.0243 131642.4379 140141.4501 120943.8697 122536.9152 130424.3796 113188.1262 144824.0076 0.846892841 0.971405564 0.953654209 0.908982151 0.967667257 0.835109259 0.846109131 0.900571541 0.781556373 1 17.14394125 -6.764418988 24.99999461 0.864794973 0.932213778 0.167340615 0.06228278 118.3181089 992722.158 0.020138627 0.018528887 1.72E-07 6.764418988 0.067418804 FSGEEGEIEDDESGT(ph)ENR ddPTM_A459_MK2206_30min_R2 1 FSGEEGEIEDDESGTENR 18 0 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 FSGEEGEIEDDES(0.322)GT(0.678)ENR 150.59 0.00032899 23688000 47308 26260 34642 36061 22449 26991 32174 31489 25984 40740 TRUE FALSE 50929.93685 24955.96659 35796.94699 33114.70095 21567.53946 28018.16142 27949.51515 35604.72042 28244.04135 39410.65714 1.292288446 0.633228888 0.90830627 0.840247368 0.547251455 0.710928552 0.709186732 0.903428743 0.716659995 1 15.26629818 -4.752438906 24.99911278 0.766470721 1.292289456 0.581270343 0.131723878 246.6493599 685026.7288 0.032070039 0.381870149 1.77E-05 4.752438906 0.525818735 FSGFSAKPNNSGEAPS(ph)SPTPK ddPTM_A459_MK2206_30min_R2 1 FSGFSAKPNNSGEAPSSPTPK 21 1 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 FSGFSAKPNNSGEAPS(0.532)S(0.352)PT(0.116)PK 97.152 0.0002018 60600000 159810 148820 154560 151070 144060 108770 173570 146240 110360 184090 TRUE FALSE 172045.1765 141429.8152 159712.9533 138727.0978 138403.4806 112909.3186 150780.0505 165354.0701 119958.9133 178083.1584 0.966094593 0.794178498 0.896844793 0.779001782 0.777184557 0.634025809 0.84668338 0.928521662 0.67361178 1 17.44219156 -2.100687913 1.252145194 0.803397386 170.0535868 0.141891708 0.106190384 2975.035373 5.843459773 0.029504129 1445143.84 0.00793071 2.100687913 169.2501894 FSGFSAKPNNSGEAPSS(ph)PTPK ddPTM_A459_MK2206_30min_R1 2 FSGFSAKPNNSGEAPSSPTPK 21 1 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 FSGFSAKPNNSGEAPS(0.236)S(0.674)PT(0.09)PK;FSGFSAKPNNSGEAPS(0.186)S(0.628)PT(0.186)PK 120.33 4.07E-05 131094000 12235.9 13455.9 13658.3 11943.8 10056.4 9023.5 10852.9 10496.6 14277.1 14471 TRUE FALSE 11195.17245 12579.91846 12731.21265 12863.71355 9655.832293 9534.402772 10128.92284 10404.82933 15761.25564 16263.77673 0.688350107 0.773493062 0.782795587 0.790942581 0.593701725 0.586235469 0.622790328 0.639754806 0.96910182 1 13.98937469 -8.269382574 22.99017349 0.984551175 0.686138322 0.730192718 0.072889751 128.0911125 370722.821 0.075942159 0.021203736 5.38E-09 8.269382574 -0.298412853 FSGFSAKPNNSGEAPSS(ph)PTPK ddPTM_A459_MK2206_30min_R2 1 FSGFSAKPNNSGEAPSSPTPK 21 1 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 FSGFSAKPNNSGEAPS(0.233)S(0.692)PT(0.075)PK 136.96 1.73E-05 58020000 98752 101520 80059 84784 87390 58776 112810 78771 65760 113680 TRUE FALSE 106312.529 96478.66442 82728.1271 77856.87599 83958.6295 61012.76187 97997.91149 89066.64016 71479.68593 109970.6309 0.966735647 0.877313003 0.752274734 0.707978806 0.763464107 0.554809601 0.891128028 0.809912969 0.649988868 1 16.74675876 -5.053317007 2.60602882 0.753770115 0.96608948 0.233506382 0.116415696 0.416880226 5.081424921 0.029733197 0.147612811 8.84E-06 5.053317007 0.212319364 FSGISGCS(ph)DGVSQEGSASSTK ddPTM_A459_MK2206_30min_R2 1 FSGISGCSDGVSQEGSASSTK 21 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 FSGISGCS(0.751)DGVS(0.249)QEGSASSTK 181.26 4.32E-13 0 9164.7 11297 9762 10391 11496 7813.9 9207.1 7028.7 6825.2 7404.8 TRUE FALSE 9866.356478 10736.00741 10087.46021 9542.022061 11044.60928 8111.26344 7998.19671 7947.375223 7418.843559 7163.181982 1.37737063 1.498776303 1.408237321 1.332092649 1.541857977 1.132354791 1.116570364 1.109475543 1.035691063 1 12.80638488 -6.853017187 5.926319272 1.082355449 1.42780003 0.88169519 0.064771029 0.068600886 3.598190496 0.022577605 0.019963069 1.40E-07 6.853017187 0.345444582 FSGWYDADLSPAGHEEAK ddPTM_A459_MK2206_30min_R1 1 FSGWYDADLSPAGHEEAK 18 0 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 0 75.548 0.021558 12073000 2013.6 2350.3 2408.2 2172.3 2207.1 1796.9 2181.5 2234.7 1694.2 1502.6 FALSE TRUE 1842.332746 2197.295043 2244.738094 2339.610922 2119.186533 1898.638925 2035.976115 2215.162254 1870.318153 1688.753432 1.090942414 1.301134317 1.32922785 1.385407057 1.254882147 1.124284273 1.205608869 1.311714435 1.10751405 1 10.72174299 -6.596053738 6.483863737 1.173528528 1.286726724 0.244300872 0.103510526 0.34339314 24.0633133 0.034457273 0.034471737 2.53E-07 6.596053738 0.113198196 FSHEEIAMATVTALR ddPTM_A459_MK2206_30min_R1 1 FSHEEIAMATVTALR 15 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BR68;H3BU78 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 142.95 0.000533 14093000 4378.6 4291.5 4918.9 3768.2 4076 3996.6 4526.5 3906.7 4342.9 4266.7 FALSE TRUE 4006.177077 4012.12257 4585.018773 4058.427417 3913.644289 4222.884038 4224.545444 3872.544134 4794.359996 4795.291008 0.835439824 0.836679685 0.956150266 0.846336001 0.816143229 0.880631443 0.880977909 0.807572289 0.999805849 1 12.22740265 -8.275455092 24.38496534 0.999902992 0.85989035 0.667899009 0.040139936 390.9265291 680136.7281 0.038323072 0.010111871 5.30E-09 8.275455092 -0.140012641 FSHLSRNMT(ph)LQRT(ph)MKLY(ph)R ddPTM_A459_MK2206_30min_R1 1 FSHLSRNMTLQRTMKLYR 18 3 O60551;Q5VUC6 O60551 NMT2 Glycylpeptide N-tetradecanoyltransferase 2;Glycylpeptide N-tetradecanoyltransferase 3 FS(0.024)HLS(0.182)RNMT(0.865)LQRT(0.931)MKLY(0.998)R 45.047 0.034558 75733000 1870.6 1645.4 1512.8 1499.1 2384.6 1920.1 1807.1 1742.1 1683.6 1853.6 TRUE FALSE 1711.495647 1538.284161 1410.115351 1614.560942 2289.616333 2028.814403 1686.551656 1726.869003 1858.616245 2083.237962 0.82155552 0.7384102 0.676886355 0.775024731 1.099066153 0.973875496 0.809581856 0.828935069 0.89217664 1 11.02461193 -6.026508834 24.39888687 0.922608613 0.741739768 0.518561931 0.085333742 481.9525919 443591.6333 0.027270132 0.035334344 9.41E-07 6.026508834 -0.180868845 FSIGDS(ph)PDSSTPK ddPTM_A459_MK2206_30min_R1 2 FSIGDSPDSSTPK 13 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 FS(0.001)IGDS(0.557)PDS(0.051)S(0.196)T(0.196)PK;FSIGDS(0.673)PDS(0.24)S(0.086)T(0.001)PK 142.1 0.00079322 4489700 8104.9 7849.5 7702.2 6864 7059.5 6807.3 6746.4 7396.9 7273.8 5779.9 TRUE FALSE 7415.535694 7338.496123 7179.396124 7392.666469 6778.305166 7192.723443 6296.359966 7332.229683 8029.93754 6495.957648 1.141561583 1.129701966 1.105209811 1.138041051 1.043465111 1.107261444 0.969273555 1.128737298 1.236143764 1 12.66532651 -6.233499683 23.97556997 1.082995779 1.127032506 0.101301538 0.069523214 1248.903019 1071705.665 0.020983936 0.027083904 5.84E-07 6.233499683 0.044036727 FSIGDS(ph)PDSSTPK ddPTM_A459_MK2206_30min_R2 2 FSIGDSPDSSTPK 13 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 FSIGDS(0.927)PDS(0.056)S(0.014)T(0.003)PK;FSIGDS(0.707)PDS(0.245)S(0.041)T(0.007)PK 136.3 0.0015007 0 54568 59162 44994 52592 58954 45302 63613 55202 43433 61744 TRUE FALSE 58745.76804 56224.10111 46494.0775 48295.06537 56639.16974 47025.99935 55260.53669 62417.09094 47210.72383 59729.29834 0.983533537 0.941315279 0.778413254 0.808565758 0.948264442 0.787318798 0.925183088 1.044999568 0.790411492 1 15.86615115 -7.507800384 24.75541059 0.94764158 0.872137239 0.116730456 0.089415354 1273.758237 2091247.069 0.038364288 0.024844356 3.11E-08 7.507800384 -0.075504341 FSIGDSPDS(ph)STPK ddPTM_A459_MK2206_30min_R2 1 FSIGDSPDSSTPK 13 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 FSIGDS(0.222)PDS(0.62)S(0.13)T(0.027)PK 117.7 0.0035649 5017200 36186 41966 32982 35918 43102 29813 47143 35169 30475 42986 TRUE FALSE 38956.42798 39882.02946 34081.60342 32983.3845 41409.59891 30947.55461 40953.06747 39765.70905 33125.66041 41583.37034 0.936827094 0.959086027 0.819596948 0.793186897 0.995821132 0.744229108 0.984842429 0.956288745 0.796608359 1 15.34371907 FSIGDSPDSS(ph)TPK ddPTM_A459_MK2206_30min_R1 1 FSIGDSPDSSTPK 13 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 FS(0.001)IGDS(0.092)PDS(0.073)S(0.793)T(0.042)PK 100.02 0.011267 4357900 1424.2 1303.8 1357.2 1438.9 1369.8 1222.2 1245.4 1340.4 1645.4 1282.3 TRUE FALSE 1303.064311 1218.922383 1265.077045 1549.724327 1315.237965 1291.399908 1162.321638 1328.681024 1816.445218 1441.161005 0.904176776 0.845791954 0.877817982 1.075330461 0.912623892 0.896083022 0.806517547 0.921951829 1.260404085 1 10.49301581 -8.162007868 7.611603755 1.128723442 0.903615666 0.513196233 0.087813699 0.202235811 13.38415468 0.059743843 0.022352477 6.89E-09 8.162007868 -0.225107776 FSKEEPVSS(ph)GPEEAVGK ddPTM_A459_MK2206_30min_R1 1 FSKEEPVSSGPEEAVGK 17 1 O00567 O00567 NOP56 Nucleolar protein 56 1 FSKEEPVS(0.086)S(0.914)GPEEAVGK 150.92 0.0011208 7242400 3880 4072.1 4462.8 4063 3798.6 3718.5 2896.8 4685.1 2735 1847.5 TRUE FALSE 3549.985625 3807.00555 4159.87757 4375.932964 3647.293718 3929.038257 2703.559758 4644.138665 3019.313037 2076.382248 1.709697542 1.833480109 2.003425706 2.107479472 1.75656179 1.892251901 1.302053011 2.236649186 1.454121966 1 11.01985634 -9.927505477 0.405419452 0.797454407 1.89502136 0.502054078 0.254841593 6.168950525 1.027416904 1.983554635 0.164488124 1.18E-10 9.927505477 1.097566954 FSKEEPVSS(ph)GPEEAVGK ddPTM_A459_MK2206_30min_R2 2 FSKEEPVSSGPEEAVGK 17 1 O00567 O00567 NOP56 Nucleolar protein 56 1 FSKEEPVS(0.121)S(0.878)GPEEAVGK;FSKEEPVS(0.09)S(0.91)GPEEAVGK 86.439 0.0061463 43332000 87042 121179 101719 116891 112278 87749 124362 96477 101680 104577 TRUE FALSE 93706.00244 115161.4271 105110.2607 107340.6314 107869.4016 91088.34968 108033.12 109086.8752 110523.9426 101164.6611 0.926272094 1.138356278 1.039001758 1.061048693 1.06627552 0.900396925 1.067893856 1.078310094 1.092515326 1 16.62634589 -10.60175782 4.115936824 0.999994203 1.04298514 0.029959454 0.069465909 48274070.16 0.077571321 3180.011265 0.016456281 2.50E-11 10.60175782 0.042990937 FSLS(ph)DDQR ddPTM_A459_MK2206_30min_R2 1 FSLSDDQR 8 0 Q6UB99;A0A2R8Y438 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 FS(0.104)LS(0.896)DDQR 81.972 0.042442 2291900 27513 17832 21050 22853 20947 22596 25876 14542 18007 24568 TRUE FALSE 29619.41643 16946.48881 21751.79649 20985.8368 20124.51553 23455.90661 22478.45012 16442.68933 19573.21631 23766.34817 1.246275457 0.71304555 0.915235119 0.883006369 0.846765157 0.986937768 0.945810015 0.691847532 0.823568525 1 14.53663262 FSLS(ph)PSLGPQASR ddPTM_A459_MK2206_30min_R2 2 FSLSPSLGPQASR 13 0 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 FS(0.012)LS(0.698)PS(0.29)LGPQASR;FS(0.034)LS(0.724)PS(0.237)LGPQAS(0.005)R 136.33 0.0010997 14792900 56517 60561 57361 74301 66928 69820 63911 50606 58723 58156 TRUE FALSE 60843.98497 57553.6288 59273.38711 68230.37062 64300.07043 72477.04903 55519.40893 57220.37796 63830.62039 56258.37448 1.081509829 1.023023316 1.053592246 1.212803805 1.142942202 1.288289071 0.98686479 1.017099738 1.134597666 1 15.77978025 FSNS(ph)MESLSSR ddPTM_A459_MK2206_30min_R1 1 FSNSMESLSSR 11 0 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 FS(0.001)NS(0.999)MESLSSR 136.33 0.0014242 4336800 1222.7 1782 1481.5 1377.6 1432.8 1538.7 1853 1289.1 1448.1 1410.3 TRUE FALSE 1118.702944 1665.991476 1380.939908 1483.702991 1375.728542 1625.819864 1729.389751 1277.829535 1598.635177 1585.018611 0.705797986 1.051086381 0.871245232 0.936079223 0.867957343 1.025741813 1.091084823 0.806192133 1.008590792 1 10.63028407 -6.754917087 24.99689197 0.980756604 0.89749496 0.181269455 0.104499819 328.7476015 1259935.416 0.03398771 0.033218656 1.76E-07 6.754917087 -0.083261644 FSNS(ph)MESLSSR ddPTM_A459_MK2206_30min_R2 2 FSNSMESLSSR 11 0 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 FS(0.007)NS(0.993)MESLSSR;FS(0.005)NS(0.995)MESLSSR 136.33 0.0014242 7228600 25971.8 35280 30748 39892 30080 35496 39356 36095 29954 30892 TRUE FALSE 27960.22098 33528.0465 31773.12297 36632.69599 28898.90806 36846.82515 34188.50992 40812.74043 32559.34478 29883.99657 0.935625224 1.121939846 1.06321532 1.225829882 0.967036253 1.232995228 1.144040753 1.365705565 1.089524445 1 14.86708548 -6.783342856 24.99983807 1.187909024 1.075106872 0.148397985 0.1169379 407.464389 465061.7804 0.03917615 0.034578335 1.65E-07 6.783342856 -0.112802152 FSPAGPILS(ph)IR ddPTM_A459_MK2206_30min_R1 1 FSPAGPILSIR 11 0 P11940;E7ERJ7;P11940-2;A0A087WTT1;Q9H361;H0YBN4;E5RH24;E5RJB9;E5RHG7;E5RFD8;E5RGC4;Q4VXU2;Q5JQF8;Q4VXU2-2 P11940 PABPC1;PABPC3;PABPC1L;PABPC1L2A Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 1-like 2 1 FSPAGPILS(1)IR 92.792 0.024509 3953600 945.9 1252.4 930.24 882.22 1154.8 1138.8 1052.8 876.46 955.43 724.87 TRUE FALSE 865.4462379 1170.868532 867.0979006 950.1687373 1108.801871 1203.277872 982.5696329 868.7972026 1054.750368 814.6723681 1.062324281 1.437226274 1.064351676 1.166320075 1.361040234 1.477008328 1.206091763 1.066437548 1.2946927 1 9.670076166 -10.25850992 7.100797802 1 1.240733957 0.19266399 0.145560098 6.22E-10 0 0.142627618 0.034592279 5.51E-11 10.25850992 0.240733957 FSPPS(ph)PLPQAVFSTSSR ddPTM_A459_MK2206_30min_R1 2 FSPPSPLPQAVFSTSSR 17 0 A0A1X7SBS4;Q99594 A0A1X7SBS4 TEAD3 Transcriptional enhancer factor TEF-5 1 FS(0.14)PPS(0.859)PLPQAVFSTSSR;FS(0.006)PPS(0.99)PLPQAVFS(0.001)T(0.001)SS(0.001)R 101.3 0.004039 22630000 2568.21 2649.5 2539.6 2352.91 2981.5 2040.84 2229.73 2186.82 1867.78 1711.56 TRUE FALSE 2349.770253 2477.017068 2367.219028 2534.131536 2862.740542 2156.390597 2080.98878 2167.700863 2061.942415 1923.600974 1.221547652 1.287697969 1.230618543 1.317389401 1.488219532 1.121017626 1.081819363 1.126897362 1.071917951 1 10.90959385 -6.968760158 22.0953117 1.083688424 1.304068674 0.703789195 0.074548255 33.55437147 23731.84344 0.027044991 0.023850817 1.07E-07 6.968760158 0.22038025 FSPPS(ph)PLPQAVFSTSSR ddPTM_A459_MK2206_30min_R2 1 FSPPSPLPQAVFSTSSR 17 0 A0A1X7SBS4;Q99594 A0A1X7SBS4 TEAD3 Transcriptional enhancer factor TEF-5 1 FS(0.004)PPS(0.996)PLPQAVFSTSSR 86.016 0.011408 8003600 19604 23713 19687 21827 13758 19275 16929 14901 15153 16411 TRUE FALSE 21104.89731 22535.4469 20343.35475 20043.66428 13217.79179 20008.52363 14706.20196 16848.61186 16470.98055 15875.51041 1.329399607 1.41951007 1.281429965 1.262552432 0.832590036 1.260338919 0.926345143 1.061295758 1.037508724 1 13.95451536 -6.070717391 6.158533357 1.030005351 1.339352875 0.662259172 0.107149733 0.134910327 9.266222612 0.030151302 0.039496656 8.50E-07 6.070717391 0.309347524 FSPT(ph)MGR ddPTM_A459_MK2206_30min_R2 1 FSPTMGR 7 0 P78344-2;P78344;H0Y3P2;D3DQV9;H0YCH5 P78344-2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 FS(0.24)PT(0.76)MGR 99.013 0.0089974 12553000 150490 124800 127960 134530 97980 101000 149990 115210 95353 160790 TRUE FALSE 162011.6301 118602.6135 132226.1225 123538.4687 94132.81289 104843.6258 130296.1328 130268.3426 103646.6316 155543.4355 1.041584491 0.762504783 0.850091308 0.794237753 0.605186664 0.674047255 0.837683265 0.837504599 0.666351693 1 17.24695798 -4.76030571 24.93759433 0.771299135 1.041584823 0.342334078 0.10768987 30.80022008 677213.3434 0.026480596 0.158124454 1.74E-05 4.76030571 0.270285688 FSS(ph)KNQLK ddPTM_A459_MK2206_30min_R1 2 FSSKNQLK 8 1 H7C5R8;Q460N5-5;Q460N5-3;Q460N5-4;Q460N5-1;Q460N5 H7C5R8 PARP14 Poly [ADP-ribose] polymerase 14 1 FS(0.075)S(0.925)KNQLK;FS(0.117)S(0.883)KNQLK 98.629 0.015059 3723000 2243.4 2638.04 2535.94 1882.67 2112.3 2070.39 2547.63 2301.28 1603.45 2147.88 TRUE FALSE 2052.587049 2466.303117 2363.807458 2027.67357 2028.162618 2187.613693 2377.682251 2281.160152 1770.134366 2413.97559 0.850293208 1.021676908 0.979217631 0.83997269 0.84017528 0.906228589 0.984965325 0.944980621 0.733285942 1 11.23719537 -5.743299325 24.98462309 0.892715621 0.957524023 0.088726431 0.083653432 570.680523 786002.6886 0.022686328 0.039192973 1.81E-06 5.743299325 0.064808402 FSS(ph)PAPSSDGK ddPTM_A459_MK2206_30min_R2 3 FSSPAPSSDGK 11 0 Q96QT6;Q96QT6-4;Q96QT6-5;Q96QT6-3 Q96QT6 PHF12 PHD finger protein 12 1 FS(0.015)S(0.984)PAPSSDGK;FS(0.006)S(0.994)PAPSSDGK;FS(0.039)S(0.931)PAPS(0.025)S(0.005)DGK 114.76 0.0063725 10417200 161487 174231 156674 165067 153833 128032 202344 148825 131612 198391 TRUE FALSE 173850.5689 165578.9419 161897.433 151580.4981 147792.7435 132904.3475 175775.9897 168276.9385 143059.3739 191917.5179 0.905860865 0.862760959 0.843578193 0.789821063 0.770084696 0.69250764 0.915893409 0.876819064 0.745421134 1 17.55012688 -9.840940994 8.86651893 1 0.822344297 0.374516248 0.068805447 0 0 0.069787206 0.016925884 1.44E-10 9.840940994 -0.177655703 FSS(ph)PIVK ddPTM_A459_MK2206_30min_R1 1 FSSPIVK 7 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 FS(0.049)S(0.951)PIVK 93.143 0.026096 33122000 10542 9415.1 9173.6 8774.6 8370.1 7216.1 8434.2 8492.7 7686.4 6737 TRUE FALSE 9645.347542 8802.175279 8550.921591 9450.421212 8036.701193 7624.669346 7871.569907 8418.449219 8485.428786 7571.630422 1.273879865 1.16252046 1.129336895 1.248135565 1.061422804 1.007004954 1.039613593 1.111841011 1.120687133 1 12.88638828 -6.2770407 23.97918943 1.059008383 1.19524826 0.650765827 0.052496956 328.086729 504266.9773 0.016879669 0.019216032 5.28E-07 6.2770407 0.136239877 FSS(ph)PIVK ddPTM_A459_MK2206_30min_R2 1 FSSPIVK 7 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 FS(0.024)S(0.976)PIVK 101.25 0.020043 22748000 148740 132710 109720 119300 137610 102170 149630 102590 93317 133780 TRUE FALSE 160127.6488 126119.8144 113378.01 109552.8084 132206.74 106058.1509 129983.4013 115998.8652 101433.544 129414.7696 1.237321283 0.974539574 0.876082463 0.846524773 1.021573816 0.819521229 1.00439387 0.896334056 0.783786459 1 16.98164275 -4.772264239 3.010966836 0.905188546 1.295611432 0.625093964 0.076788924 0.243592365 3.148641017 0.018718626 0.234822615 1.69E-05 4.772264239 0.390422886 FSS(ph)PTEELDYR ddPTM_A459_MK2206_30min_R1 3 FSSPTEELDYR 11 0 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 FS(0.068)S(0.932)PTEELDYR;FS(0.062)S(0.938)PTEELDYR;FS(0.251)S(0.746)PT(0.003)EELDYR 216.91 1.88E-05 193823000 9066.2 8660.4 9254.6 7698 8731.1 7379.2 9421.9 7416 7631.5 6550.2 TRUE FALSE 8295.072081 8096.606386 8626.423537 8290.901294 8383.321799 7797.003927 8793.382242 7351.162694 8424.821735 7361.688227 1.126789376 1.099830112 1.171799629 1.126222822 1.138777077 1.059132591 1.194479034 0.998570228 1.144414362 1 12.84582094 -9.71757075 0.311004121 0.963806582 1.137001359 0.326743523 0.052257059 7.365843903 0.92615402 0.362418932 0.0548026 1.92E-10 9.71757075 0.173194776 FSSLKRTMS(ph)IKES(ph)S(ph)S(ph)LECIAIPK ddPTM_A459_MK2206_30min_R2 1 FSSLKRTMSIKESSSLECIAIPK 23 3 Q9Y4E5;Q9Y4E5-2;E9PH99 Q9Y4E5 ZNF451 Zinc finger protein 451 4 FS(0.108)S(0.108)LKRT(0.104)MS(0.698)IKES(0.994)S(0.994)S(0.994)LECIAIPK 57.989 0.02334 0 7315.6 9054 7992.8 9995.5 8281.4 8935.1 9715.3 6342.4 7908.7 9906.6 TRUE FALSE 7875.687961 8604.391526 8259.275963 9178.835676 7956.230625 9275.131492 8439.66944 7171.373457 8596.58443 9583.348453 0.821809621 0.897848134 0.861836132 0.957790038 0.83021406 0.967838281 0.880659769 0.74831605 0.897033482 1 13.22631411 -11.93738812 1.909712237 1.776600351 0.874545252 0.276420782 0.061287067 4214792.495 361603.9908 14125638.93 0.015504863 1.16E-12 11.93738812 -0.902055099 FSSSIENSDS(ph)PVR ddPTM_A459_MK2206_30min_R2 3 FSSSIENSDSPVR 13 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 FSSS(0.001)IENS(0.094)DS(0.906)PVR;FSSS(0.002)IENS(0.018)DS(0.979)PVR;FSSSIENS(0.023)DS(0.977)PVR 96.135 0.01443 25214100 177321 186234 194826 203466 194174 164388 204599 157558 152960 191606 TRUE FALSE 190896.8321 176985.8904 201321.4016 186842.1769 186549.7531 170643.9005 177734.9055 178151.3716 166264.1843 185353.9119 1.029904522 0.954853817 1.086145955 1.008029315 1.006451664 0.920638247 0.958894817 0.961141687 0.897009308 1 17.49992304 -6.656599854 5.738256464 0.946030265 1.018233822 0.443595819 0.039069818 0.195896607 9.291031529 0.01265014 0.012593503 2.20E-07 6.656599854 0.072203557 FSSVS(ph)SPQPR ddPTM_A459_MK2206_30min_R1 1 FSSVSSPQPR 10 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 FS(0.001)S(0.003)VS(0.498)S(0.498)PQPR 111.5 0.008813 38793000 5526.3 6156 5865.4 4818.6 5435.4 5519.8 6034.7 5710.8 5548.7 5163.2 TRUE FALSE 5056.259165 5755.243281 5467.27299 5189.729407 5218.896508 5832.326306 5632.136174 5660.871078 6125.507221 5802.856196 0.871339732 0.991794917 0.942169305 0.894340516 0.899366852 1.005078552 0.970580001 0.975531856 1.055602106 1 12.50254746 -6.769579331 24.99985073 0.997905601 0.923629927 0.544435447 0.037152398 161.2811148 495332.0799 0.013257205 0.011892594 1.70E-07 6.769579331 -0.074275674 FSSVSS(ph)PQPR ddPTM_A459_MK2206_30min_R1 1 FSSVSSPQPR 10 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 FSSVS(0.046)S(0.954)PQPR 136.81 0.0018153 33011000 6164.9 5857.6 5969.8 5105.1 5505.3 5281.5 6249.9 5857.2 5186.2 4526.5 TRUE FALSE 5640.542882 5476.269175 5564.586609 5498.295687 5286.012243 5580.533966 5832.980575 5805.991118 5725.324049 5087.276993 1.108754819 1.076463731 1.093824185 1.080793457 1.039065152 1.096958938 1.146582068 1.141276782 1.125420152 1 12.31267793 -7.00124447 24.99742987 1.116046774 1.079190474 0.033721505 0.04222785 89.88924355 1805603.162 0.014305549 0.012445689 9.97E-08 7.00124447 -0.036856299 FSSVSS(ph)PQPR ddPTM_A459_MK2206_30min_R2 2 FSSVSSPQPR 10 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 FS(0.005)S(0.025)VS(0.057)S(0.912)PQPR;FSS(0.029)VS(0.151)S(0.82)PQPR 95.483 0.022718 42530000 569340 589530 608430 740360 647080 544990 738220 556160 585320 736110 TRUE FALSE 612929.1081 560254.7975 628714.7525 679870.2197 621672.3879 565729.9763 641290.8272 628852.0216 636230.0756 712090.791 0.860745731 0.78677439 0.882913753 0.954752158 0.873024052 0.794463267 0.900574527 0.883106522 0.893467636 1 19.44170167 -14.52287873 0.189743514 1.56671059 0.845651117 0.446018481 0.045242575 139.7639399 1.362545669 29.8485399 0.132929991 3.00E-15 14.52287873 -0.721059473 FSTLTDDPS(ph)PR ddPTM_A459_MK2206_30min_R2 3 FSTLTDDPSPR 11 0 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 FSTLTDDPS(0.999)PR;FSTLT(0.017)DDPS(0.983)PR;FST(0.001)LT(0.021)DDPS(0.978)PR 103.43 0.012081 1923100 47552 63694 50357 59976 58828 60788 57666 48163 57157 52305 TRUE FALSE 51192.61768 60531.04858 52035.87725 55075.76895 56518.11713 63101.32994 50094.38493 54458.06947 62128.41254 50598.29213 1.011745961 1.19630616 1.028411732 1.088490671 1.116996538 1.247103949 0.990041023 1.076282759 1.227875684 1 15.62680107 -4.703577076 23.26692029 1.108182863 1.011739987 0.100068237 0.086544033 30860.11574 12405809.02 0.020763789 41.06060014 1.98E-05 4.703577076 -0.096442876 FSTYSQS(ph)PPDTPSLR ddPTM_A459_MK2206_30min_R2 1 FSTYSQSPPDTPSLR 15 0 A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4;H3BMG9;H3BSV5 A0A0A0MTL6 FAM65A Protein FAM65A 1 FST(0.041)YS(0.015)QS(0.722)PPDT(0.214)PS(0.008)LR 144.08 0.00037477 9892000 18590 18733 18077 17577 17938 21138 23819 14526 17000 18374 TRUE FALSE 20013.26469 17802.74646 18679.67816 16140.90287 17233.66399 21942.4214 20691.53669 16424.59808 18478.62927 17774.45788 1.125956405 1.00159153 1.050928151 0.908095368 0.969574662 1.234491738 1.16411633 0.924056204 1.039617039 1 14.11751794 -7.785172017 24.99923866 0.986377538 1.058805607 0.122534345 0.093477508 623.4848736 656750.0355 0.055761426 0.026811767 1.64E-08 7.785172017 0.072428069 FSTYTS(ph)DKDENK ddPTM_A459_MK2206_30min_R1 2 FSTYTSDKDENK 12 1 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 FSTYT(0.052)S(0.948)DKDENK;FSTYT(0.028)S(0.972)DKDENK 124.12 0.014859 7069200 3891.4 5614 5140.8 4663.2 2958.5 3159.8 4101 4192.5 5364.9 5330.7 TRUE FALSE 3560.415995 5248.52758 4791.856819 5022.360472 2840.65668 3338.705145 3827.429773 4155.845415 5922.600553 5991.107361 0.594283457 0.876053 0.799828234 0.838302532 0.474145514 0.557276801 0.638851809 0.693668994 0.988565251 1 12.54860697 -8.262759838 6.07609555 0.998358017 0.686197773 0.516235261 0.12015671 0.130356557 22.97631858 0.108356884 0.033683518 5.46E-09 8.262759838 -0.312160245 FSTYTS(ph)DKDENK ddPTM_A459_MK2206_30min_R2 1 FSTYTSDKDENK 12 1 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 FSTYT(0.046)S(0.954)DKDENK 169.09 0.0017176 5488200 37364 26170 34773 21330 22597 13916 35075 25844 15960 39814 TRUE FALSE 40224.61657 24870.43585 35932.31446 19587.27077 21709.72824 14445.58313 30469.61037 29221.89954 17348.17195 38514.87244 1.04439179 0.645735901 0.932946475 0.508563823 0.563671301 0.375065065 0.791112846 0.758717287 0.45042787 1 15.23312803 -3.344019331 12.03217725 0.688542678 0.832678019 0 0.224409699 0 0 0.050245292 0 0.000452877 3.344019331 0.144135341 FSVCVLGDQQHCDEAK ddPTM_A459_MK2206_30min_R1 2 FSVCVLGDQQHCDEAK 16 0 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 ; 106.35 0.0049287 15509900 5535.2 6096.5 6343.5 5028.9 5372.4 4807.5 5113 4883.4 5025.9 4860.4 FALSE TRUE 5064.402174 5699.616742 5912.920894 5416.226749 5158.405932 5079.696495 4771.921099 4840.704949 5548.36029 5462.543046 0.927114373 1.043399877 1.082448384 0.991521111 0.944323164 0.929914227 0.873571349 0.886163259 1.015710127 1 12.41535703 -6.199105454 3.225304028 0.930938354 1.02189292 0.268610343 0.055367234 0.291447089 6.02032523 0.01754668 0.02281642 6.32E-07 6.199105454 0.090954566 FSVCVLGDQQHCDEAK ddPTM_A459_MK2206_30min_R2 1 FSVCVLGDQQHCDEAK 16 0 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 107.13 0.0047391 5221500 30536 34115 29841 30592 36074 29775 36632 27890 30806 39279 FALSE TRUE 32873.85964 32420.89871 30835.88405 28092.53574 34657.5535 30908.10849 31822.1744 31535.31876 33485.4502 37997.32945 0.865162371 0.853241509 0.811527665 0.739329215 0.912104982 0.813428442 0.837484499 0.829935135 0.881257991 1 15.21361041 -8.703883276 2.007058575 0.999952921 0.831417107 0.595068976 0.041732763 0.472666764 3.555385405 0.039999104 0.011089374 1.98E-09 8.703883276 -0.168535814 FTATMS(ph)TPDKK ddPTM_A459_MK2206_30min_R1 1 FTATMSTPDKK 11 1 H0Y322;Q5TKA1;Q5TKA1-2;C9J5J4;H7C4T7;Q5TKA1-3;B1B047 H0Y322 LIN9 Protein lin-9 homolog 1 FTATMS(0.972)T(0.028)PDKK 235.31 8.43E-08 16295000 6755.8 7663 6269 5523.6 4182.3 3995 4484.1 5577.3 5339.4 4952.1 TRUE FALSE 6181.183734 7164.137307 5843.477746 5949.028629 4015.710135 4221.193448 4184.973871 5528.538254 5894.449737 5565.603534 1.110604393 1.287216609 1.049927058 1.068891917 0.721522852 0.758443073 0.751935319 0.993340295 1.059085452 1 12.44232243 -5.887909445 2.29429813 0.870175711 1.178548539 0.489583088 0.12353212 0.249839266 2.673546566 0.040345059 0.068017752 1.29E-06 5.887909445 0.308372828 FTDEEVDELYR ddPTM_A459_MK2206_30min_R1 4 FTDEEVDELYR 11 0 J3QRS3;P19105;O14950 J3QRS3 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B 0 ;;; 290.43 1.05E-51 77655900 6822.6 6653.8 6310.9 5455 6422.8 7086.9 7302 6198.3 6111.3 6588.5 FALSE TRUE 6242.302043 6220.636411 5882.533691 5875.145045 6166.966275 7488.154154 6814.896903 6144.108917 6746.591505 7404.733121 0.843015128 0.840089212 0.79442886 0.793431032 0.832841127 1.011265907 0.920343352 0.829754269 0.911118793 1 12.85423202 -6.583567249 12.4926224 0.922939941 0.817104975 0.561803587 0.049843927 0.732616263 149.1913632 0.017138783 0.017137756 2.61E-07 6.583567249 -0.105834966 FTDEEVDELYR ddPTM_A459_MK2206_30min_R2 4 FTDEEVDELYR 11 0 J3QRS3;P19105;O14950 J3QRS3 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B 0 ;;; 245.5 3.05E-10 102177700 72108 75010 74889 86660 74173 81694 84420 65356 65614 75339 FALSE TRUE 77628.64392 71285.11247 77385.76188 79579.60079 71260.59533 84802.92242 73335.55259 73898.2536 71320.98712 72880.6946 1.065146873 0.97810693 1.061814275 1.091916059 0.977770529 1.16358554 1.006241131 1.013961983 0.978599168 1 16.15324909 -7.488131222 24.99992113 0.999788554 1.053935626 0.229898651 0.050847238 961.5286718 691796.4187 0.020814749 0.014025184 3.25E-08 7.488131222 0.054147073 FTDKDQQPS(ph)GSEGEDDDAEAALKK ddPTM_A459_MK2206_30min_R1 1 FTDKDQQPSGSEGEDDDAEAALKK 24 2 H3BNW0;Q9NXG2 H3BNW0 THUMPD1 THUMP domain-containing protein 1 1 FT(0.001)DKDQQPS(0.758)GS(0.241)EGEDDDAEAALKK 80.844 0.0028179 0 546.5 891.25 604.91 545.93 627.94 450.5 488.09 495.59 529.46 532.79 TRUE FALSE 500.0173052 833.229463 563.8503946 587.9776232 602.9278201 476.0069207 455.5304067 491.2571089 584.4992617 598.7960476 0.835037752 1.391507954 0.941640141 0.98193304 1.006900133 0.794939984 0.760743843 0.820408069 0.976124115 1 9.225920888 -6.099978415 1.304234974 0.860450568 1.097239091 0.198151115 0.153095493 0.582218268 2.009229312 0.05602478 0.093539837 7.94E-07 6.099978415 0.236788522 FTDKDQQPSGS(ph)EGEDDDAEAALKK ddPTM_A459_MK2206_30min_R2 1 FTDKDQQPSGSEGEDDDAEAALKK 24 2 H3BNW0;Q9NXG2 H3BNW0 THUMPD1 THUMP domain-containing protein 1 1 FT(0.003)DKDQQPS(0.079)GS(0.918)EGEDDDAEAALKK 48.354 0.020341 9680300 16250 27242 28175 23738 19710 20058 27883 30914 26082 28839 TRUE FALSE 17494.11249 25889.20189 29114.34044 21798.52947 18936.08637 20821.32125 24221.92861 34954.56594 28350.56521 27897.98579 0.627074393 0.927995379 1.043600088 0.78136571 0.678761775 0.746337797 0.868232165 1.252942281 1.016222656 1 14.76787334 -7.617812445 6.700351233 1.098917144 0.810976096 0.502638529 0.128361277 0.187216445 11.18132558 0.06420671 0.036691922 2.41E-08 7.617812445 -0.287941049 FTGSFDDDPDPHRDPYGEEVDRR ddPTM_A459_MK2206_30min_R2 2 FTGSFDDDPDPHRDPYGEEVDRR 23 2 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 0 ; 48.196 0.029028 22637200 65948 86295 69413 85248 84499 94489 76744 44746 76903 69290 FALSE TRUE 70997.02959 82009.71578 71727.19478 78282.96571 81181.14469 98084.84511 66667.42061 50594.45584 83591.88393 67029.07297 1.059197546 1.223494704 1.070090807 1.167895694 1.211133335 1.463317942 0.994604545 0.754813599 1.247098911 1 16.03249936 -7.481831281 24.95410555 0.97551537 1.196497003 0.289685634 0.151937685 571.033815 347151.0503 0.062580638 0.04218596 3.30E-08 7.481831281 0.220981633 FTGVASGS(ph)TGSTGSCSVGAK ddPTM_A459_MK2206_30min_R2 1 FTGVASGSTGSTGSCSVGAK 20 0 B3KRP1;Q9UKI8;Q9UKI8-2;F8W7X8;Q9UKI8-5 B3KRP1 TLK1 Serine/threonine-protein kinase tousled-like 1 1 FTGVAS(0.011)GS(0.295)T(0.295)GS(0.145)T(0.243)GS(0.01)CSVGAK 138.46 8.49E-05 4492400 14245 14358 14291 16164 13989 15818 16219 14307 11761 14507 TRUE FALSE 15335.60815 13645.0026 14767.45481 14843.34949 13439.72157 16419.96507 14089.42582 16176.97402 12783.95052 14033.63778 1.092774974 0.972306883 1.052289865 1.05769792 0.957679098 1.170043387 1.003975308 1.152728486 0.910950583 1 13.77660141 -4.471167358 15.86253721 1.038014474 1.454618536 0.046933974 0.077911759 776315.6995 6594211.844 0.017906578 9976570.23 3.38E-05 4.471167358 0.416604062 FTGVASGSTGST(ph)GSCSVGAK ddPTM_A459_MK2206_30min_R2 1 FTGVASGSTGSTGSCSVGAK 20 0 B3KRP1;Q9UKI8;Q9UKI8-2;F8W7X8;Q9UKI8-5 B3KRP1 TLK1 Serine/threonine-protein kinase tousled-like 1 1 FTGVASGS(0.014)T(0.172)GS(0.278)T(0.525)GS(0.01)CS(0.001)VGAK 118.66 0.00060272 5005200 15235 22037 22520 23915 20096 20652 23574 20783 18052 22306 TRUE FALSE 16401.40331 20942.67462 23270.80556 21961.068 19306.93007 21437.92633 20478.70548 23499.40946 19622.13033 21578.15705 0.76009287 0.970549736 1.078442682 1.017745304 0.894744163 0.993501265 0.949047939 1.089036909 0.909351539 1 14.39728403 -4.768161225 4.891838752 0.992711854 0.745646686 0.570574275 0.059831598 0.122774463 7.433991314 0.014736046 0.103962212 1.71E-05 4.768161225 -0.247065168 FTIGDHSR ddPTM_A459_MK2206_30min_R1 2 FTIGDHSR 8 0 D6RD66;O75083 D6RD66 WDR1 WD repeat-containing protein 1 0 ; 138.4 0.0034713 18955300 12662.1 11121.7 12484.8 9934.1 13741.1 12582.3 13466.9 12848.8 10976.7 10187.2 FALSE TRUE 11585.1219 10397.67531 11637.36656 10699.2261 13193.76289 13294.69895 12568.54767 12736.4643 12117.76725 11449.26725 1.011865795 0.908152032 1.016428939 0.934490031 1.152367449 1.16118339 1.097760005 1.112426151 1.058388016 1 13.48296765 -6.257921231 24.98801791 1.10588723 0.966956522 0.588041658 0.052698744 198.8144163 1412097.326 0.015258983 0.018911858 5.52E-07 6.257921231 -0.138930708 FTIGDHSR ddPTM_A459_MK2206_30min_R2 4 FTIGDHSR 8 0 D6RD66;O75083 D6RD66 WDR1 WD repeat-containing protein 1 0 ;;; 141.52 0.0031935 25567700 135118 182532 156741 193278 190768 203555 194607 132896 166986 160852 FALSE TRUE 145462.738 173467.7263 161966.6667 177486.5691 183277.4898 211301.4282 169054.8671 150265.9635 181510.1404 155603.4124 0.93483 1.114806697 1.040894054 1.14063417 1.177850067 1.357948549 1.086447042 0.965698381 1.16649203 1 17.24751417 -1.599617013 16.05737699 1.10669672 0.00549008 0 0.117697159 0 0 0.027927965 0 0.025141025 1.599617013 -1.10120664 FTPPSTALS(ph)PGK ddPTM_A459_MK2206_30min_R2 2 FTPPSTALSPGK 12 0 C9JWM1;A8MZI9;H9KVB1;Q01196-6;Q01196-5;Q01196-7;Q01196-3;Q01196-4;Q01196;Q01196-9;Q01196-10;Q01196-2;Q01196-8 C9JWM1 RUNX1 Runt-related transcription factor 1 1 FTPPS(0.065)T(0.065)ALS(0.87)PGK;FTPPS(0.001)T(0.002)ALS(0.997)PGK 105.66 0.010795 4198400 94955 103532 101509 87928 89859 69263 96024 81405 72001 95298 TRUE FALSE 102224.8278 98390.75143 104893.2594 80744.00113 86330.68415 71898.852 83415.93345 92044.91301 78263.51683 92188.43406 1.108868253 1.067278693 1.137813658 0.875858257 0.93645895 0.779911848 0.904841636 0.998443177 0.848951581 1 16.49229814 -5.763284962 25 0.902210483 1.100916074 0.667536579 0.064068305 27.80301444 376625.7481 0.017682917 0.027814673 1.72E-06 5.763284962 0.198705591 FTPVAS(ph)KFSPGAPGGSGSQPNQK ddPTM_A459_MK2206_30min_R1 1 FTPVASKFSPGAPGGSGSQPNQK 23 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FT(0.131)PVAS(0.379)KFS(0.379)PGAPGGS(0.081)GS(0.03)QPNQK 81.345 0.00027633 183050000 7237.2 7276.9 7886.4 7886.3 7366.3 5970.3 6441.8 7234 5509.9 4170.9 TRUE FALSE 6621.638136 6803.172487 7351.093141 8493.704192 7072.884673 6308.333227 6012.079276 7170.753901 6082.673822 4687.622581 1.412579196 1.451305512 1.568192194 1.811942844 1.508842606 1.345742563 1.282543373 1.529720829 1.297603149 1 12.1946407 -6.726970974 4.158379503 1.32143692 1.564693036 0.401532733 0.157087723 0.2514851 9.4621079 0.055676722 0.053409656 1.88E-07 6.726970974 0.243256116 FTPVASKFS(ph)PGAPGGSGSQPNQK ddPTM_A459_MK2206_30min_R1 1 FTPVASKFSPGAPGGSGSQPNQK 23 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FTPVAS(0.008)KFS(0.989)PGAPGGS(0.002)GSQPNQK 117.83 5.90E-06 157420000 4589.5 4638.9 5055.8 4749.1 4275.9 3499.9 4062.9 4764 3572 2755.6 TRUE FALSE 4199.138925 4336.906767 4712.626382 5114.876505 4105.581849 3698.061313 3791.871354 4722.34885 3943.322183 3096.984532 1.355879851 1.400364362 1.521682247 1.651566694 1.325670763 1.194084528 1.224375296 1.524821581 1.273277972 1 11.59664846 -6.502980735 23.63805134 1.273257222 1.480485266 0.381399045 0.141252897 465.5545923 553061.0097 0.045057867 0.050342025 3.14E-07 6.502980735 0.207228045 FTPVASKFS(ph)PGAPGGSGSQPNQK ddPTM_A459_MK2206_30min_R2 1 FTPVASKFSPGAPGGSGSQPNQK 23 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FTPVAS(0.064)KFS(0.856)PGAPGGS(0.003)GS(0.077)QPNQK 98.76 3.17E-05 149270000 49324 58214 62581 53585 67969 54086 65036 46602 53220 53974 TRUE FALSE 53100.28336 55323.17741 64667.41931 49206.93409 65300.19554 56144.28063 56496.69508 52693.04141 57848.9794 52212.8328 1.01699679 1.059570501 1.23853497 0.942429887 1.250654141 1.075296582 1.082046157 1.009197138 1.10794562 1 15.67211681 -8.549519223 0.682553201 1.004982337 1.098752867 0.073073718 0.0912139 2.151006496 2.282887304 0.087769965 0.035015749 2.82E-09 8.549519223 0.093770531 FTPVASKFSPGAPGGSGS(ph)QPNQK ddPTM_A459_MK2206_30min_R2 1 FTPVASKFSPGAPGGSGSQPNQK 23 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FT(0.005)PVAS(0.023)KFS(0.284)PGAPGGS(0.284)GS(0.403)QPNQK 55.972 0.010116 147880000 112780 144830 142270 180880 193280 165010 187680 146760 145800 162470 TRUE FALSE 121414.5235 137637.9528 147013.2108 166101.5254 185690.856 171289.5712 163037.3906 165942.0359 158481.4205 157168.6172 0.772511241 0.875734324 0.935385279 1.056836462 1.181475407 1.089845888 1.037340618 1.055821696 1.008352833 1 17.26195365 -5.390304446 1.714886406 1.069191743 0.794031675 0.779076794 0.051524354 0.195878219 1.049130317 0.016320181 0.058703212 4.07E-06 5.390304446 -0.275160068 FTQQNYHDR ddPTM_A459_MK2206_30min_R1 1 FTQQNYHDR 9 0 Q9BZE4-2;Q9BZE4;Q5T3R7 Q9BZE4-2 GTPBP4 Nucleolar GTP-binding protein 1 0 101.3 0.024097 2679200 1186.9 1152.1 1297.4 1134.6 1693.4 1416.1 1216.9 1137.1 1000.7 1009.5 FALSE TRUE 1085.947922 1077.098081 1209.336103 1221.987089 1625.948292 1496.278358 1135.722821 1127.158455 1104.726346 1134.564481 0.957149585 0.949349374 1.065903369 1.07705389 1.433103467 1.318812974 1.001020956 0.993472362 0.973700803 1 10.14792289 -7.479390411 24.61690282 0.989601009 1.135390116 0.196194697 0.140451235 741.4728702 419717.2175 0.068010842 0.045849163 3.32E-08 7.479390411 0.145789108 FTS(ph)PADLDASGAGPGPK ddPTM_A459_MK2206_30min_R2 1 FTSPADLDASGAGPGPK 17 0 P52735-3;P52735-2;P52735 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 1 FT(0.197)S(0.803)PADLDASGAGPGPK 72.662 0.026895 3800200 10274 13390 13031 17322 17987 16421 14361 12174 13310 13806 TRUE FALSE 11060.58534 12725.07207 13465.44704 15906.73719 17280.74 17045.91266 12475.38345 13765.1836 14467.67974 13355.51135 0.828166369 0.952795572 1.008231485 1.191024198 1.293903284 1.27632048 0.934100022 1.030674396 1.083274115 1 13.70514759 -5.24025195 1.960493736 1.121181034 0.847399872 0.39888748 0.111668026 0.430463552 2.930001033 0.035204473 0.149419618 5.75E-06 5.24025195 -0.273781161 FTSGAFLS(ph)PSVSVQECR ddPTM_A459_MK2206_30min_R1 1 FTSGAFLSPSVSVQECR 17 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;H7C3P6 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 FTS(0.008)GAFLS(0.768)PS(0.192)VS(0.032)VQECR 78.326 0.018912 11544000 2269.7 1872.2 2249.5 1813.7 1944.9 2143.5 2154.3 1913.5 1899.6 1723.2 TRUE FALSE 2076.650096 1750.31944 2096.810207 1953.391488 1867.430515 2264.863118 2010.590578 1896.770471 2097.070218 1936.683025 1.072271543 0.903771767 1.082681151 1.008627361 0.964241691 1.169454726 1.038161925 0.979391282 1.082815407 1 10.91937213 FTSGAFLS(ph)PSVSVQECR ddPTM_A459_MK2206_30min_R2 2 FTSGAFLSPSVSVQECR 17 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;H7C3P6 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 FTS(0.007)GAFLS(0.983)PS(0.009)VSVQECR;FT(0.003)S(0.009)GAFLS(0.959)PS(0.029)VSVQECR 216.77 1.01E-11 24419000 48956 49568 52003 58850 50010 47757 55548 34670 39532 44748 TRUE FALSE 52704.109 47106.5252 53736.75407 54041.76675 48046.35612 49574.4261 48254.48087 39201.48804 42970.4219 43287.87642 1.217525861 1.088215202 1.241381156 1.248427301 1.109926383 1.145226567 1.114734306 0.905599703 0.992666433 1 15.40167541 -7.609089454 4.216156937 0.962825235 1.171931704 0.740542798 0.055152676 0.111914176 3.714737347 0.028406134 0.01573292 2.46E-08 7.609089454 0.209106469 FTVHS(ph)PDASSGTNSNGITNPCIR ddPTM_A459_MK2206_30min_R2 1 FTVHSPDASSGTNSNGITNPCIR 23 0 A0A087WV86;Q6PGQ7-2;Q6PGQ7 A0A087WV86 BORA Protein aurora borealis 1 FT(0.062)VHS(0.929)PDAS(0.009)SGTNSNGITNPCIR 82.146 0.0019892 0 5673.3 8310.6 6958.2 6443.4 9169.1 8258.9 6671 6885.4 5414.2 7174.7 TRUE FALSE 6107.65221 7897.907689 7190.182915 5916.953609 8809.075063 8573.198227 5795.089687 7785.345421 5885.117329 6940.590127 0.879990332 1.137930283 1.035961321 0.852514484 1.269211249 1.235226122 0.834956334 1.121712315 0.847927514 1 12.76084262 -7.274717206 24.99538439 0.961291754 1.06945995 0.133234487 0.145670387 1920.642677 3615577.01 0.061430996 0.041666887 5.31E-08 7.274717206 0.108168196 FTVQMPTSQS(ph)PAVK ddPTM_A459_MK2206_30min_R2 1 FTVQMPTSQSPAVK 14 0 Q16594 Q16594 TAF9 Transcription initiation factor TFIID subunit 9 1 FTVQMPT(0.001)S(0.001)QS(0.998)PAVK 128.45 0.001521 0 20961 21690 16358 23537 20151 19385 19354 15941 17654 21672 TRUE FALSE 22565.79028 20612.90614 16903.36756 21613.95181 19359.77049 20122.70976 16812.79655 18024.54343 19189.51301 20964.84441 1.076363355 0.983212932 0.806272025 1.030961708 0.923439741 0.959831104 0.801951888 0.85975088 0.915318646 1 14.3556845 -7.130821835 20.15558513 0.882304235 0.95838475 0.139789208 0.081284849 6.986681141 1076.673055 0.030882794 0.023921726 7.40E-08 7.130821835 0.076080514 FVAFSGEGQS(ph)LR ddPTM_A459_MK2206_30min_R1 2 FVAFSGEGQSLR 12 0 Q92890;Q92890-1 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 FVAFS(0.001)GEGQS(0.999)LR;FVAFS(0.002)GEGQS(0.998)LR 82.774 0.035695 14847600 3419.4 3106.1 3766.3 3010.2 3329 3644.9 2584.2 3481.2 2481.7 2857.2 TRUE FALSE 3128.562074 2903.892325 3510.65405 3242.046126 3196.398881 3851.271088 2411.812733 3450.764235 2739.681596 3211.171507 0.974274363 0.904309321 1.093262706 1.009614752 0.995399615 1.199335221 0.751069424 1.074612249 0.853171993 1 11.64888401 -8.262683519 24.98982599 0.926586012 0.998620798 0.059562752 0.116917765 357.6954105 7184240.796 0.089909617 0.028239348 5.46E-09 8.262683519 0.072034786 FVAFSGEGQS(ph)LR ddPTM_A459_MK2206_30min_R2 3 FVAFSGEGQSLR 12 0 Q92890;Q92890-1 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 FVAFS(0.005)GEGQS(0.995)LR;FVAFSGEGQS(1)LR;FVAFSGEGQS(1)LR 131.79 0.0019749 16163800 35357.2 52273 33229.2 46069.6 39242 49044 50398 42643 56786 28792.7 TRUE FALSE 38064.17442 49677.19883 34337.04494 42305.56631 37701.1619 50910.40379 43780.68206 48216.58652 61725.14363 27853.19656 1.366599856 1.78353672 1.232786509 1.518876522 1.353566792 1.827811888 1.571836897 1.731097054 2.216088323 1 14.76555529 -6.759863491 24.99872986 1.708964779 1.461183273 0.102200731 0.31195459 87.91682038 1394655.331 0.100521264 0.095496839 1.74E-07 6.759863491 -0.247781506 FVCVGGS(ph)PSR ddPTM_A459_MK2206_30min_R2 1 FVCVGGSPSR 10 0 F8WD51;C9J486;C9JIP2;B4DND0;Q16831 F8WD51 UPP1 Uridine phosphorylase 1 1 FVCVGGS(0.804)PS(0.196)R 83.883 0.039045 5330000 14886 14718 12297 10520 15658 12484 14458 10146 14677 11795 TRUE FALSE 16025.68361 13987.12552 12706.97584 9660.482348 15043.18824 12959.08737 12559.64723 11472.11704 15953.57893 11410.13012 1.40451366 1.225851535 1.1136574 0.846658386 1.318406372 1.135752812 1.100745312 1.005432622 1.398194303 1 13.47802762 -4.883959637 2.584355305 1.114075258 1.431395395 0.266420752 0.148253676 0.524054951 5.414654537 0.03780704 0.333520245 1.31E-05 4.883959637 0.317320137 FVFSVPQMAVPEGDLHAAVGAPVMS(ph)PLSPGER ddPTM_A459_MK2206_30min_R1 1 FVFSVPQMAVPEGDLHAAVGAPVMSPLSPGER 32 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 FVFS(0.001)VPQMAVPEGDLHAAVGAPVMS(0.805)PLS(0.194)PGER 46.101 0.038014 9111900 1448.9 1101.8 913.91 732.3 1136.6 838.54 1014.3 670.23 746.67 1017.6 TRUE FALSE 1325.663447 1030.07262 851.8763355 788.7018729 1091.326815 886.0174101 946.6378977 664.3702498 824.2890185 1143.66797 1.159133141 0.900674537 0.744863332 0.689624868 0.954233959 0.774715593 0.827720914 0.580911827 0.720741544 1 10.15945255 -4.823440525 2.547598873 0.775810317 1.221084953 0.484104522 0.116122238 0.376310475 3.398313767 0.030206385 0.354018669 1.50E-05 4.823440525 0.445274637 FVFSVPQMAVPEGDLHAAVGAPVMSPLS(ph)PGER ddPTM_A459_MK2206_30min_R1 2 FVFSVPQMAVPEGDLHAAVGAPVMSPLSPGER 32 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 FVFSVPQMAVPEGDLHAAVGAPVMS(0.194)PLS(0.806)PGER;FVFSVPQMAVPEGDLHAAVGAPVMS(0.232)PLS(0.768)PGER 54.083 0.0039208 16589400 5247.2 4195 3568.5 2662.3 3102.2 2724.9 2998.4 2426.2 2128.16 2496.8 TRUE FALSE 4800.898086 3921.904738 3326.280162 2867.350807 2978.632805 2879.181483 2798.382207 2404.987989 2349.389848 2806.122434 1.710865509 1.397624241 1.185365301 1.021819566 1.061476423 1.026035589 0.997241665 0.85705027 0.837237114 1 11.45436224 -1.522878745 0.464882346 0.913964183 21.56018513 0.94782784 0.057322929 19.71124228 0.22936657 0.037073212 389.8544956 0.03 1.522878745 20.64622095 FVHGPS(ph)PR ddPTM_A459_MK2206_30min_R1 2 FVHGPSPR 8 0 Q5T200;Q5T9K0;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 FVHGPS(1)PR;FVHGPS(1)PR 93.667 0.015705 9168800 8646.9 8096.4 7433 5934.5 7487.9 6633.8 7578.5 6501.5 6003.5 5356.5 TRUE FALSE 7911.435748 7569.322888 6928.46867 6391.576218 7189.641087 7009.400023 7072.952093 6444.658071 6627.585309 6020.10366 1.314169356 1.257340956 1.150888599 1.061705343 1.194271975 1.164332114 1.174888755 1.070522774 1.100908835 1 12.55557261 -1.522878745 0.189882702 1.034539311 2.157844459 0.650421806 0.052972229 40.48304684 0.472970713 0.119189445 13.32144251 0.03 1.522878745 1.123305147 FVHGPS(ph)PR ddPTM_A459_MK2206_30min_R2 3 FVHGPSPR 8 0 Q5T200;Q5T9K0;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 FVHGPS(1)PR;FVHGPS(1)PR;FVHGPS(1)PR 80.916 0.029761 28407000 183964 223742 193605 204345 198234 205486 200201 143710 161156 177643 TRUE FALSE 198048.4253 212631.2976 200059.6941 187649.3598 190450.3371 213305.9137 173914.3682 162493.3904 175173.0576 171846.5235 1.152472691 1.237332553 1.164176557 1.091959011 1.108258307 1.241258243 1.01203309 0.945572754 1.019357588 1 17.39076114 -7.378203507 5.984595148 0.98581389 1.162699783 0.755504636 0.047897295 0.121007497 5.510722045 0.021343596 0.014234226 4.19E-08 7.378203507 0.176885893 FVINYDYPNSSEDYIHR ddPTM_A459_MK2206_30min_R1 2 FVINYDYPNSSEDYIHR 17 0 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ; 109.87 0.0030779 33241000 5458.1 5040.6 5544.3 5355.6 5713.3 5649.6 5916.9 5354.5 4249.4 4079.2 FALSE TRUE 4993.859933 4712.456024 5167.968363 5768.08924 5485.727163 5969.47547 5522.194397 5307.686171 4691.140337 4584.562092 1.089277412 1.027896652 1.127254525 1.258154895 1.196565136 1.302081933 1.204519491 1.15773024 1.023247203 1 12.16256822 -8.270678507 3.712417835 1.00219601 1.174737531 0.422406651 0.074628266 0.247136289 7.212005168 0.076305244 0.02205302 5.36E-09 8.270678507 0.172541521 FVMQEEFSR ddPTM_A459_MK2206_30min_R1 1 FVMQEEFSR 9 0 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 150.36 0.0043135 0 1370.2 1354.8 1515.7 1183.4 1166 948.96 1238.2 1257.9 959.6 1091.9 FALSE TRUE 1253.657295 1266.602274 1412.818507 1274.545673 1119.555751 1002.689295 1155.601937 1246.902313 1059.353854 1227.172815 1.021581703 1.032130323 1.151279175 1.038603249 0.912304882 0.81707261 0.94167824 1.016077196 0.863247491 1 10.26112271 -6.192632461 4.681391163 0.921251145 1.068259886 0.523470689 0.063697085 0.178848792 7.643785103 0.019791188 0.025630888 6.42E-07 6.192632461 0.14700874 FVS(ph)EGDGGR ddPTM_A459_MK2206_30min_R1 1 FVSEGDGGR 9 0 Q53EL6;Q53EL6-2 Q53EL6 PDCD4 Programmed cell death protein 4 1 FVS(1)EGDGGR 90.149 0.028927 32608000 3583.7 3966.2 3557 2284 3408.8 3476.1 5109.5 4175.6 4388.8 4198.3 TRUE FALSE 3278.887496 3707.999659 3315.56075 2459.914076 3273.020278 3672.913778 4768.654578 4139.093169 4845.031465 4718.4171 0.6949126 0.785856693 0.702684964 0.521343074 0.693669129 0.77842075 1.010647104 0.877220704 1.026834077 1 12.20408724 -7.074308571 2.979544439 0.9690757 0.679155145 0.789328447 0.07273 0.131962379 2.287975905 0.031826872 0.024534029 8.43E-08 7.074308571 -0.289920555 FVS(ph)EGDGGR ddPTM_A459_MK2206_30min_R2 4 FVSEGDGGR 9 0 Q53EL6;Q53EL6-2 Q53EL6 PDCD4 Programmed cell death protein 4 1 FVS(1)EGDGGR;FVS(1)EGDGGR;FVS(1)EGDGGR;FVS(1)EGDGGR 125.68 0.0049856 157119000 384701 468320 428370 461410 348909 395016 486014 423167 415131 470228 TRUE FALSE 414154.0043 445063.9098 442651.642 423711.327 335209.0795 410048.6107 422199.778 478476.3798 451238.344 454884.4989 0.9104597 0.978410807 0.973107774 0.931470138 0.736910315 0.901434566 0.928147209 1.051863453 0.991984438 1 18.79514075 -7.643011113 5.412734725 1.01569657 0.90604358 0.367491916 0.064220217 0.251155885 10.83866051 0.034579286 0.019463558 2.28E-08 7.643011113 -0.10965299 FVS(ph)FTSR ddPTM_A459_MK2206_30min_R1 1 FVSFTSR 7 0 Q8N5V2;Q8N5V2-3 Q8N5V2 NGEF Ephexin-1 1 FVS(0.997)FT(0.001)S(0.001)R 93.143 0.026096 4335600 3346.8 1640 1701.2 1511.7 1578.1 1644.9 1451.6 1802 1051.7 1494 TRUE FALSE 3062.137085 1533.235702 1585.727284 1628.131396 1515.240935 1738.032817 1354.766413 1786.245304 1161.027979 1679.087999 1.82369065 0.913136002 0.944397962 0.969652214 0.902419013 1.035105258 0.806846582 1.063818755 0.691463449 1 10.71346213 -4.760854375 24.99994335 0.928211116 1.823691672 0.869929802 0.104220986 4.22328529 180329.6302 0.023280555 0.134401017 1.73E-05 4.760854375 0.895480556 FVSEDDRNS(ph)FTLK ddPTM_A459_MK2206_30min_R2 2 FVSEDDRNSFTLK 13 1 A0A087WYC1;P34932 A0A087WYC1 HSPA4 Heat shock 70 kDa protein 4 1 FVSEDDRNS(0.995)FT(0.005)LK;FVS(0.011)EDDRNS(0.989)FTLK 157.37 0.0017324 13727700 64244 63022 62323 66559 63834 52152 79819 51731 53070 63280 TRUE FALSE 69162.57004 59892.41912 64400.81771 61120.91679 61327.55642 54136.6809 69338.66942 58492.41932 57685.93267 61215.17878 1.129827135 0.978391639 1.052040017 0.998460153 1.001835781 0.884366949 1.132703862 0.955521498 0.942346879 1 15.9016018 -2.843215533 1.743880259 0.994270937 116.0153826 0.284495947 0.063157742 1534.228102 7.030505411 0.016635206 704751.355 0.001434777 2.843215533 115.0211117 FVYS(ph)LLWPR ddPTM_A459_MK2206_30min_R1 2 FVYSLLWPR 9 0 C9JFR9;Q9UNU6 C9JFR9 CYP8B1 7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase 1 FVY(0.334)S(0.666)LLWPR;FVY(0.354)S(0.646)LLWPR 96.19 0.021704 123943000 4177.2 4666.6 4818.4 3843.2 4852.4 4101 4777.7 4820.1 3743.4 3598.7 TRUE FALSE 3821.907205 4362.803492 4491.340433 4139.20393 4659.118633 4333.195076 4458.98835 4777.958374 4132.539826 4044.534125 0.944956103 1.07869123 1.110471638 1.02340685 1.151954339 1.071370631 1.102472674 1.18133714 1.021759169 1 11.98175782 -4.763344924 4.787478447 1.090259356 0.934737744 0.353352341 0.055069456 0.184518303 10.32411861 0.012873207 0.097565452 1.72E-05 4.763344924 -0.155521611 FWEGDFHR ddPTM_A459_MK2206_30min_R1 2 FWEGDFHR 8 0 P49589-3;B4DKY1;P49589-2;P49589 P49589-3 CARS "Cysteine--tRNA ligase, cytoplasmic" 0 ; 146.58 0.002571 8244500 5488.2 4970.9 5653.2 4445.9 5756.5 4751 5787.5 4912.3 4207 3445.6 FALSE TRUE 5021.39977 4647.293506 5269.476535 4788.323988 5527.206415 5019.997514 5401.426435 4869.352279 4644.332705 3872.466941 1.296692741 1.200086037 1.360754427 1.236504807 1.42730887 1.296330631 1.394828288 1.257429012 1.19932146 1 11.91903721 -8.613526616 1.690918404 1.001456205 1.313229209 0.678873841 0.065583065 0.273659787 1.688963808 0.061767747 0.01767939 2.43E-09 8.613526616 0.311773004 FWEGDFHR ddPTM_A459_MK2206_30min_R2 2 FWEGDFHR 8 0 P49589-3;B4DKY1;P49589-2;P49589 P49589-3 CARS "Cysteine--tRNA ligase, cytoplasmic" 0 ; 148.99 0.002093 4343800 24944 32738 28603 32954 30816 28668 31212 25090 28578 24985 FALSE TRUE 26853.73182 31112.27853 29556.60974 30261.55279 29606.009 29758.98083 27113.82691 28369.34915 31063.66278 24169.7415 1.111047539 1.287240847 1.222876535 1.252042881 1.224920383 1.231249446 1.121808726 1.173754761 1.285229417 1 14.56091442 -7.241694328 23.74855567 1.15967779 1.226146079 0.177022556 0.077834159 820.6994024 987105.0051 0.028372787 0.021936022 5.73E-08 7.241694328 0.066468289 FWEVISDEHGIDPTGTYHGDS(ph)DLQLER ddPTM_A459_MK2206_30min_R1 2 FWEVISDEHGIDPTGTYHGDSDLQLER 27 0 P04350;M0QY85;M0R2D3;M0QZL7;M0QYM7;M0R278;M0R0X0;M0QY37;M0QX14;P68371 P04350;P68371 TUBB4A;TUBB4B Tubulin beta-4A chain;Tubulin beta-4B chain 1 FWEVISDEHGIDPTGTY(0.005)HGDS(0.995)DLQLER;FWEVISDEHGIDPTGTY(0.001)HGDS(0.999)DLQLER 129.84 3.25E-12 26300000 1990.6 1681.88 2037.86 1525.76 2408.78 2543.36 2172.37 1816.26 1524 1460.08 TRUE FALSE 1821.289017 1572.389306 1899.535741 1643.2743 2312.833192 2687.362845 2027.455161 1800.38063 1682.425254 1640.965733 1.109888512 0.958209714 1.157571851 1.001406834 1.409434179 1.637671519 1.235525593 1.097146999 1.025265317 1 10.6803294 -6.243571724 24.6526185 1.259273756 1.05692944 0.174125412 0.184479495 1203.577188 1660615.884 0.059250368 0.076319364 5.71E-07 6.243571724 -0.202344316 FWEVISDEHGIDPTGTYHGDSDLQLDR ddPTM_A459_MK2206_30min_R1 4 FWEVISDEHGIDPTGTYHGDSDLQLDR 27 0 P07437;Q5JP53 P07437 TUBB Tubulin beta chain 0 ;;; 195.97 5.29E-40 95439000 6364.25 4880.26 5735.58 4441.17 7098 7073.07 7114.38 6083.22 4512.21 4533.22 FALSE TRUE 5822.937117 4562.554187 5346.26481 4783.229683 6815.27163 7473.541111 6639.792691 6030.035049 4981.270377 5094.829518 1.142911082 0.895526371 1.049351071 0.938839988 1.337683941 1.466887378 1.303241388 1.18355973 0.977710905 1 12.31481816 -6.255996447 24.99496155 1.238046927 1.001768778 0.294090902 0.152114618 533.8673168 2451616.026 0.04734132 0.059364724 5.55E-07 6.255996447 -0.236278149 FWEVISDEHGIDPTGTYHGDSDLQLER ddPTM_A459_MK2206_30min_R1 1 FWEVISDEHGIDPTGTYHGDSDLQLER 27 0 P04350;M0QY85;M0R2D3;M0QZL7;M0QYM7;M0R278;M0R0X0;M0QY37;M0QX14;P68371 P04350;P68371 TUBB4A;TUBB4B Tubulin beta-4A chain;Tubulin beta-4B chain 0 111.33 4.82E-10 10633000 1540.9 937.14 1027.8 998.12 2008.3 1529.3 1475.9 1481.7 776.34 968.16 FALSE TRUE 1409.838363 876.1320157 958.0357996 1074.995375 1928.305158 1615.887644 1377.445404 1468.745653 857.0433212 1088.10297 1.295684694 0.805192192 0.880464281 0.987953718 1.772171579 1.485050302 1.26591457 1.3498223 0.787649096 1 10.08759937 -6.048486197 24.99882492 1.311033541 0.968135242 0.196203611 0.275439436 540.9681067 278914.7314 0.082409035 0.106392008 8.94E-07 6.048486197 -0.342898298 FYCDYCDTYLTHDS(ph)PSVR ddPTM_A459_MK2206_30min_R1 2 FYCDYCDTYLTHDSPSVR 18 0 A0A0A0MRR7;P09234 A0A0A0MRR7 SNRPC U1 small nuclear ribonucleoprotein C 1 FYCDYCDT(0.002)YLT(0.015)HDS(0.865)PS(0.118)VR;FYCDYCDTYLT(0.043)HDS(0.903)PS(0.053)VR 218.74 1.83E-14 44425000 5695.6 4687.1 5066.7 3768.7 5328.6 5261.6 5955.5 4397 4134 4624.9 TRUE FALSE 5211.159311 4381.968938 4722.786521 4058.965927 5116.350579 5559.507245 5558.219461 4358.557493 4563.744094 5197.867528 1.002557161 0.843032054 0.908600786 0.780890607 0.984317232 1.069574631 1.069326879 0.838528006 0.878003156 1 12.34370415 FYCDYCDTYLTHDS(ph)PSVR ddPTM_A459_MK2206_30min_R2 2 FYCDYCDTYLTHDSPSVR 18 0 A0A0A0MRR7;P09234 A0A0A0MRR7 SNRPC U1 small nuclear ribonucleoprotein C 1 FYCDYCDTYLT(0.02)HDS(0.829)PS(0.151)VR;FYCDYCDTYLT(0.005)HDS(0.913)PS(0.082)VR 147.41 0.00014571 10336800 75312 110711 80398 122554 114439 110427 105729 77891 100750 96533 TRUE FALSE 81077.94463 105213.2527 83078.42919 112540.9462 109945.5499 114629.3769 91846.6553 88071.62114 109513.0529 93383.13612 0.868228976 1.126683651 0.889651308 1.205152781 1.177359793 1.22751689 0.983546485 0.943121262 1.172728369 1 16.51087442 -4.195183448 1.88772487 1.083920278 3.71E-40 0.224494909 0.114466667 11.83149249 8.880017779 0.031667888 39.36920808 6.38E-05 4.195183448 -1.083920278 FYDPS(ph)PPR ddPTM_A459_MK2206_30min_R1 3 FYDPSPPR 8 0 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;H0Y470;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4W8;A0A2R8YG73;A0A2R8Y802;A0A2R8Y4X4 Q3V6T2 CCDC88A Girdin 1 FYDPS(1)PPR;FYDPS(1)PPR;FYDPS(1)PPR 114.86 0.010127 22792800 21478.5 22354.2 22540.7 19123.7 22793.5 21859.1 22824.1 21438.3 18909.1 17784.7 TRUE FALSE 19651.64079 20898.93752 21010.70009 20596.61069 21885.58663 23096.74335 21301.54593 21250.8672 20874.76861 19988.0029 0.9831718 1.045574068 1.051165551 1.030448654 1.094936134 1.155530318 1.065716572 1.063181114 1.044364898 1 14.28684671 -3.786829707 0.847638713 1.072360893 0.619433882 0.266826646 0.039108866 14.03837563 2.208464285 0.014217068 8.823665228 0.000163369 3.786829707 -0.452927011 FYDPS(ph)PPR ddPTM_A459_MK2206_30min_R2 1 FYDPSPPR 8 0 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;H0Y470;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4W8;A0A2R8YG73;A0A2R8Y802;A0A2R8Y4X4 Q3V6T2 CCDC88A Girdin 1 FYDPS(1)PPR 83.647 0.038396 13093000 57904 66258 70364 73899 71609 75156 68554 63826 73141 79443 TRUE FALSE 62337.17476 62967.72407 72709.90064 67861.21531 68797.27085 78016.11424 59552.77745 72168.27735 79502.67197 76850.78142 0.81114562 0.819350473 0.946117909 0.883025703 0.895205873 1.015163578 0.774914404 0.939070183 1.034507008 1 16.22977231 -1.522878745 0.143380939 1.019464003 0.318854531 0.356432599 0.068991876 91.35143602 0.871009792 0.285149962 13.17562657 0.03 1.522878745 -0.700609471 FYDS(ph)NTVK ddPTM_A459_MK2206_30min_R1 1 FYDSNTVK 8 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 FYDS(0.958)NT(0.042)VK 103.31 0.015517 7954600 1815.5 1914.3 1846.5 1991.2 1968.7 1694.5 1770.7 1941.1 1802.5 1581.2 TRUE FALSE 1661.082191 1789.678722 1721.164725 2144.562569 1890.28251 1790.441126 1652.579834 1924.129167 1989.876325 1777.090993 0.93471983 1.007083334 0.968529316 1.206782645 1.063694835 1.007512352 0.929935406 1.082740937 1.119738006 1 10.79530184 FYDS(ph)NTVK ddPTM_A459_MK2206_30min_R2 2 FYDSNTVK 8 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 FYDS(0.963)NT(0.037)VK;FYDS(0.975)NT(0.025)VK 135.8 0.0024038 7484900 64648 71437 64421 63584 76979 61144 75563 47407 58774 70741 TRUE FALSE 69597.50059 67889.54246 66568.76399 58388.9838 73956.41767 63470.87777 65641.48733 53603.25767 63886.05628 68432.72696 1.01702071 0.992062504 0.972762112 0.853231873 1.080717092 0.927493037 0.959211919 0.783298577 0.933559996 1 16.06239882 -7.553117169 24.99953948 0.889308569 0.971472576 0.132805293 0.074698439 326.0362473 269546.0074 0.033696507 0.019454926 2.80E-08 7.553117169 0.082164008 FYEAFS(ph)K ddPTM_A459_MK2206_30min_R2 2 FYEAFSK 7 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 FYEAFS(1)K;FYEAFS(1)K 96.034 0.023406 9074100 38683 37988 33746 43457 32222 25819 53351 29367 25345 45313 TRUE FALSE 41644.60022 36101.57116 34871.0748 39906.42409 30956.80238 26801.56014 46345.94961 33205.36773 27549.46229 43834.44052 0.950042928 0.823589185 0.795517734 0.910389721 0.706220999 0.611426993 1.057295338 0.757517772 0.628488968 1 15.41977721 -2.080307291 1.139021038 0.798405071 92.46433999 0.080600159 0.139369838 2414.678586 6.988849939 0.041847879 576152.1639 0.008311755 2.080307291 91.66593492 FYEEVHDLER ddPTM_A459_MK2206_30min_R1 5 FYEEVHDLER 10 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;F8VVB5;P55209;F8W020;P55209-2;P55209-3;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8VUX1;F8VXI6;F8W118;F8VRJ2;F8W543;H0YH88 E9PNJ7;P55209 NAP1L4;NAP1L1 Nucleosome assembly protein 1-like 4;Nucleosome assembly protein 1-like 1 0 ;;;; 188.99 0.00025795 341202300 46642.5 47152.9 48525.1 41271.8 50198.4 44669.1 49905.4 45278.3 40110.4 36750.4 FALSE TRUE 42675.31045 44083.23764 45231.35141 44450.56119 48198.89143 47198.22584 46576.30182 44882.4366 44280.01962 41303.317 1.033217512 1.067305021 1.095102154 1.07619834 1.166949653 1.142722407 1.127664924 1.086654532 1.072069336 1 15.33397003 -1.965293594 20.00739626 1.093506873 0.167861649 0 0.047808279 0 0 0.011200357 0 0.010831944 1.965293594 -0.925645224 FYEEVHDLER ddPTM_A459_MK2206_30min_R2 5 FYEEVHDLER 10 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;F8VVB5;P55209;F8W020;P55209-2;P55209-3;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8VUX1;F8VXI6;F8W118;F8VRJ2;F8W543;H0YH88 E9PNJ7;P55209 NAP1L4;NAP1L1 Nucleosome assembly protein 1-like 4;Nucleosome assembly protein 1-like 1 0 ;;;; 200.71 0.00015309 146200100 465363 573733 526539 565847 578441 595266 605523 491560 527283 545775 FALSE TRUE 500991.5491 545242.2535 544093.5475 519615.49 555728.4999 617919.2648 526017.1027 555808.5798 573145.1222 527966.4064 0.948908004 1.032721489 1.030545771 0.984182864 1.052583068 1.170376102 0.996307902 1.052734744 1.085571194 1 19.01008661 -2.901456386 0.612578164 1.057528763 2.24E-17 0.2507226 0.050656639 44.28219674 1.910771261 0.023171339 53.76126231 0.001254711 2.901456386 -1.057528763 FYEQMNGPVAGASR ddPTM_A459_MK2206_30min_R1 1 FYEQMNGPVAGASR 14 0 P29692;E9PI39;E9PQ49;E9PK01;P29692-2;E9PRY8;A0A087X1X7;E9PL12;P29692-3;E9PL71;E9PPR1;E9PMW7;P29692-4;E9PIZ1;E9PQZ1;H0YCK7;E9PK06;E9PN91;E9PK72;E9PKK3 P29692 EEF1D Elongation factor 1-delta 0 247.29 3.92E-25 17996000 1310.1 1205.6 878.26 872.58 1181.6 1357 1391.3 1227.9 999.54 1075.6 FALSE TRUE 1198.669115 1127.115221 818.6461582 939.7862628 1134.53437 1433.832167 1298.488916 1217.1646 1103.44576 1208.853448 0.991575213 0.932383675 0.677208771 0.777419516 0.938521019 1.186109176 1.07414916 1.006875235 0.912803584 1 10.23942364 -6.523873069 24.90451106 1.041414797 0.841330893 0.44033044 0.101657126 31.65788947 792891.0815 0.036156081 0.036453546 2.99E-07 6.523873069 -0.200083904 FYFHDGVR ddPTM_A459_MK2206_30min_R2 1 FYFHDGVR 8 0 H0Y8C6;O00410-2;O00410;O00410-3 H0Y8C6 IPO5 Importin-5 0 90.37 0.039849 2590500 29236 39858 32670 35953 43478 41296 36146 31603 31039 36908 FALSE TRUE 31474.33064 37878.70968 33759.20149 33015.52489 41770.83526 42867.54822 31399.98678 35733.62061 33738.71611 35703.69498 0.881542671 1.060918476 0.945538032 0.924708911 1.169930319 1.200647391 0.879460425 1.000838166 0.944964271 1 15.12378577 -1.554699466 21.32266629 1.005768221 0.00069929 0 0.106445887 0 0 0.025198656 0 0.027880498 1.554699466 -1.005068931 FYHDAK ddPTM_A459_MK2206_30min_R2 1 FYHDAK 6 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 0 106.75 0.036363 3823800 69268 53532 56325 46887 61219 48450 59112 107170 92380 66035 FALSE TRUE 74571.21134 50873.67872 58202.84739 43056.18212 58815.23446 50293.7987 51350.52339 121177.487 100415.0454 63880.28336 1.167358806 0.796390937 0.911123814 0.674013637 0.920710294 0.787313331 0.803855598 1.89694661 1.571925485 1 15.96308309 -7.745775387 24.99936755 1.550827028 0.856609543 0.584767356 0.239134489 134.2979306 214337.0706 0.106667563 0.061312786 1.80E-08 7.745775387 -0.694217485 FYHDWNDKEIEVLNK ddPTM_A459_MK2206_30min_R1 1 FYHDWNDKEIEVLNK 15 1 J3KQ32;Q9NTK5;Q9NTK5-2;Q9NTK5-3;C9JCJ9 J3KQ32 OLA1 Obg-like ATPase 1 0 99.669 0.0064402 5286500 3175.3 4081.1 3629.9 3429 3476.7 2851 3608.9 3219 3334.2 3106.6 FALSE TRUE 2905.224061 3815.419648 3383.512501 3693.102174 3338.215677 3012.421156 3368.156866 3190.856622 3680.802022 3491.469062 0.832092168 1.092783462 0.969079904 1.057750222 0.956106332 0.862794744 0.964681859 0.913900873 1.054227306 1 11.76961847 -3.162474888 16.66195788 0.970204111 0.406530122 0 0.080405194 0 0 0.017777398 0 0.0006879 3.162474888 -0.563673989 FYPEDVSEELIQDITQR ddPTM_A459_MK2206_30min_R1 2 FYPEDVSEELIQDITQR 17 0 P26038;V9GZ54 P26038 MSN Moesin 0 ; 211.82 3.55E-08 3674100 1049.03 1349.24 1093.83 1109.37 1205.9 1317.97 1162.59 1276.42 882.83 1298.53 FALSE TRUE 959.8044898 1261.404231 1019.583867 1194.81387 1157.866449 1392.592322 1085.035742 1265.260395 974.6033377 1459.4017 0.657669845 0.864329698 0.69863141 0.818701163 0.793384337 0.954221393 0.74347984 0.866971989 0.667810198 1 10.51116132 FYQGLPWGVSS(ph)LPR ddPTM_A459_MK2206_30min_R1 1 FYQGLPWGVSSLPR 14 0 Q5JTC6 Q5JTC6 AMER1 APC membrane recruitment protein 1 1 FYQGLPWGVS(0.001)S(0.999)LPR 244 5.90E-20 6436500 3361.6 3232.1 3161.7 2630.3 2789.5 2533.6 2747.2 2618.6 2427.8 2006 TRUE FALSE 3075.678268 3021.689703 2947.092613 2832.886162 2678.388308 2677.050243 2563.939301 2595.705856 2680.178498 2254.518425 1.364228491 1.340281663 1.307193847 1.256537153 1.188009057 1.187415553 1.137244776 1.151334949 1.188803103 1 11.13860358 -1.522878745 0.120324835 0.942161161 2.347628391 0.923700664 0.028520065 24.56172105 0.203837391 0.208340367 5.786161605 0.03 1.522878745 1.40546723 FYSLPQS(ph)PQQFK ddPTM_A459_MK2206_30min_R1 1 FYSLPQSPQQFK 12 0 A0A3B3ITS3;A0A3B3IS54;A0A3B3IS01;A0A3B3IT01;A0A3B3ISK7;Q6PI48 A0A3B3ITS3 DARS2 "Aspartate--tRNA ligase, mitochondrial" 1 FYSLPQS(1)PQQFK 198.74 8.11E-20 0 2200.6 2341.9 2208.9 2115.9 2297.8 2119.3 1961.8 1801 2245.8 1758.6 TRUE FALSE 2013.427414 2189.441884 2058.966022 2278.866985 2206.27376 2239.292935 1830.931902 1785.254047 2479.258947 1976.468645 1.018699396 1.107754424 1.041739786 1.15299931 1.11627056 1.132976706 0.926365266 0.903254424 1.254388201 1 10.94870935 -7.237267128 24.96743318 1.012939818 1.096822029 0.122781843 0.095962918 1499.644201 1548978.741 0.036180752 0.028010237 5.79E-08 7.237267128 0.083882211 FYVHNDIFR ddPTM_A459_MK2206_30min_R2 2 FYVHNDIFR 9 0 Q13283;E5RIZ6 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 0 ; 161.79 0.001307 9895800 72862 89904 76789 80672 81847 94964 90521 72792 81224 77450 FALSE TRUE 78440.37074 85439.49809 79349.10693 74080.83954 78633.27553 98577.92156 78635.48396 82306.16433 88288.7167 74922.81284 1.04694909 1.14036693 1.059078055 0.988762124 1.049523804 1.315726383 1.04955328 1.098546106 1.178395649 1 16.19311744 FYVHNDMFR ddPTM_A459_MK2206_30min_R1 1 FYVHNDMFR 9 0 Q9UN86-2;Q9UN86;D6RAC7;D6RB17 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 0 105.4 0.019348 6719700 4655.2 4846.2 5282.9 4804.2 5482.2 4748.4 4912.1 4643.6 4282.5 3902.2 FALSE TRUE 4259.250795 4530.711499 4924.311467 5174.220316 5263.832365 5017.250305 4584.422772 4603.001495 4727.6812 4385.633996 0.971182456 1.033080167 1.122827731 1.179811248 1.200244336 1.144019384 1.045327261 1.049563529 1.077992647 1 12.0985697 -10.32025403 10.09658211 0.999992231 1.095500586 0.140064685 0.067428331 0 0 0.073548478 0.017838126 4.78E-11 10.32025403 0.095508355 FYVHNDMFR ddPTM_A459_MK2206_30min_R2 1 FYVHNDMFR 9 0 Q9UN86-2;Q9UN86;D6RAC7;D6RB17 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 0 129.42 0.0060673 0 17894 20397 19822 24783 18988 20474 18330 16951 17093 14042 FALSE TRUE 19263.9784 19384.11464 20482.85559 22758.14962 18242.43571 21253.15242 15923.24898 19166.5539 18579.71824 13583.81069 1.418157161 1.427001236 1.507887297 1.67538772 1.342954207 1.564594273 1.172222534 1.410985057 1.36778395 1 13.72960064 -9.462376515 0.344881426 0.906866302 1.504850213 0.577717752 0.118163407 3.364376468 0.58844251 0.576491324 0.110954087 3.45E-10 9.462376515 0.597983911 FYWGHK ddPTM_A459_MK2206_30min_R1 1 FYWGHK 6 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 0 123.07 0.024174 5459000 4773.1 4607.5 5768.2 5180.9 5154.3 4981.6 5508.4 4768.3 4644.8 3857.7 FALSE TRUE 4367.12278 4307.550913 5376.670655 5579.933816 4948.993317 5263.653887 5140.944687 4726.611256 5127.643582 4335.621 1.007265806 0.993525705 1.240115466 1.286997599 1.141472771 1.214048434 1.185745868 1.090180912 1.182678002 1 12.08202293 -12.01417081 1.663564289 3.40E-05 1.152299518 0.195584462 0.090514958 1422821.797 97501.33974 5339976.863 0.026284069 9.68E-13 12.01417081 1.152265498 GAAAADLLSS(ph)SPESQHGGTQSPGGGQPLLQPTK ddPTM_A459_MK2206_30min_R1 1 GAAAADLLSSSPESQHGGTQSPGGGQPLLQPTK 33 0 Q9H3S7 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 1 GAAAADLLS(0.03)S(0.469)S(0.39)PES(0.108)QHGGT(0.002)QSPGGGQPLLQPTK 99.774 3.20E-11 14075000 2911.3 1206.2 1820.7 1041.9 4081.8 3828.5 4042.7 2407 1835 1921.5 TRUE FALSE 2663.678647 1127.676161 1697.115957 1122.147319 3919.213263 4045.266361 3773.018859 2385.955853 2025.754817 2159.549927 1.233441568 0.522181102 0.785865581 0.519620919 1.814828736 1.873198814 1.747132036 1.104839404 0.93804491 1 11.07651496 -6.255137473 24.99328844 1.457965101 0.749383859 0.427993004 0.364443428 492.379254 1952769.114 0.115492434 0.145439848 5.56E-07 6.255137473 -0.708581242 GAAAADLLSS(ph)SPESQHGGTQSPGGGQPLLQPTK ddPTM_A459_MK2206_30min_R2 1 GAAAADLLSSSPESQHGGTQSPGGGQPLLQPTK 33 0 Q9H3S7 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 1 GAAAADLLS(0.053)S(0.467)S(0.384)PES(0.095)QHGGT(0.001)QSPGGGQPLLQPTK 94.588 6.70E-11 16332000 32247 66827 49196 89797 78721 88019 93870 57700 69134 52174 TRUE FALSE 34715.85511 63508.46836 50836.17009 82460.29785 75630.018 91368.62472 81544.75624 65241.58811 75147.15035 50471.56665 0.687829949 1.258301903 1.007223937 1.633797073 1.498467811 1.810298962 1.615657323 1.29264044 1.488900689 1 15.62318325 -4.708105847 0.958176018 1.498878883 0.260339251 0.4611265 0.242380853 1.975607761 1.310063065 0.080894225 2.634159923 1.96E-05 4.708105847 -1.238539632 GAAAADLLSSS(ph)PESQHGGTQSPGGGQPLLQPTK ddPTM_A459_MK2206_30min_R2 2 GAAAADLLSSSPESQHGGTQSPGGGQPLLQPTK 33 0 Q9H3S7 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 1 GAAAADLLS(0.05)S(0.186)S(0.601)PES(0.162)QHGGT(0.001)QSPGGGQPLLQPTK;GAAAADLLS(0.044)S(0.16)S(0.607)PES(0.138)QHGGT(0.008)QS(0.044)PGGGQPLLQPTK 104.54 7.34E-14 34622000 69539 130138 102241 187533 169707 207784 188611 122893 167544 106817 TRUE FALSE 74862.95931 123675.5362 105649.6639 172210.954 163043.4505 215691.3657 163846.1491 138955.5371 182116.6743 103331.57 0.724492614 1.196880451 1.022433549 1.666586058 1.577866768 2.087371417 1.585634952 1.344753951 1.762449503 1 16.65692157 -5.756968127 24.0553012 1.611234004 1.002829705 0.472482084 0.285400719 58.06807373 312396.9548 0.076303283 0.126443432 1.75E-06 5.756968127 -0.608404299 GAAAADLLSSSPESQHGGT(ph)QSPGGGQPLLQPTK ddPTM_A459_MK2206_30min_R2 1 GAAAADLLSSSPESQHGGTQSPGGGQPLLQPTK 33 0 Q9H3S7 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 1 GAAAADLLS(0.023)S(0.125)S(0.125)PES(0.125)QHGGT(0.599)QS(0.004)PGGGQPLLQPTK 108.75 8.76E-14 12972000 37800 87459 62136 115590 103470 122970 103370 66469 101630 72201 TRUE FALSE 40693.99706 83115.91324 64207.58323 106145.9272 99407.2479 127649.7095 89797.39483 75156.72652 110469.5937 69845.08728 0.582632203 1.190003714 0.919285604 1.519733619 1.423253256 1.827611855 1.285665153 1.07604886 1.581637277 1 16.09187102 -4.581756685 0.967060057 1.391945622 1.01E-13 0.435995997 0.259925685 2.654599636 1.532272114 0.086964169 4.232654201 2.62E-05 4.581756685 -1.391945622 GAAAHPDSEEQQQR ddPTM_A459_MK2206_30min_R1 1 GAAAHPDSEEQQQR 14 0 Q9Y490 Q9Y490 TLN1 Talin-1 0 152.96 0.00052349 819670 1099 967.4 1350.8 1106.3 1124.5 1002 1259.4 1123.7 451.33 940.34 FALSE TRUE 1005.524279 904.4220842 1259.11146 1191.507418 1079.708784 1058.732374 1175.387724 1113.875609 498.2473686 1056.836418 0.951447416 0.855782473 1.191396736 1.127428424 1.021642295 1.001793992 1.112175644 1.053971636 0.47145174 1 10.04553637 -8.220346323 24.6936784 0.735725682 1.041904581 0.402246431 0.148077983 349.3424271 209927.7245 0.095702117 0.036171088 6.02E-09 8.220346323 0.306178899 GAAAHPDSEEQQQR ddPTM_A459_MK2206_30min_R2 4 GAAAHPDSEEQQQR 14 0 Q9Y490 Q9Y490 TLN1 Talin-1 0 ;;; 209.67 7.02E-06 12210900 66784.8 95836.9 80329.5 97438.9 99948.9 100406 91831.4 81276.9 92501.3 80768.9 FALSE TRUE 71897.89564 91077.77891 83007.64544 89477.83018 96024.40398 104227.0207 79773.82687 91900.0699 100546.8959 78133.41741 0.92019392 1.165669977 1.062383397 1.14519284 1.228979957 1.33396214 1.020994979 1.176194168 1.286861617 1 16.2536521 -3.98794584 1.123318546 1.173400092 7.39E-14 0.303031774 0.10455576 10.36765897 2.948914569 0.031499133 22.09901504 0.000102814 3.98794584 -1.173400092 GAADEVEVEPPEPPGPVAS(ph)R ddPTM_A459_MK2206_30min_R1 2 GAADEVEVEPPEPPGPVASR 20 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 GAADEVEVEPPEPPGPVAS(1)R;GAADEVEVEPPEPPGPVAS(1)R 234.38 1.82E-24 8046600 3587.1 3798.5 3407.14 1807.99 2533.47 2454.69 3554.7 1758.39 2556.2 3852 TRUE FALSE 3281.998308 3551.21696 3175.87283 1947.241703 2432.556525 2593.672426 3317.572449 1743.016582 2821.926137 4329.214841 0.758104744 0.820291228 0.73359095 0.449790961 0.561893233 0.599109197 0.766321971 0.402617252 0.65183324 1 12.07988968 -8.582480397 21.30814643 1.000000001 0.633143978 0.4075494 0.130943191 12180.92715 4354786.459 0.134491733 0.034725616 2.62E-09 8.582480397 -0.366856023 GAADEVEVEPPEPPGPVAS(ph)R ddPTM_A459_MK2206_30min_R2 2 GAADEVEVEPPEPPGPVASR 20 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 GAADEVEVEPPEPPGPVAS(1)R;GAADEVEVEPPEPPGPVAS(1)R 265.96 1.27E-48 9674700 64236 40188 45367 46947 35338 34117 33183 24823.4 18855 32228 TRUE FALSE 69153.95755 38192.32236 46879.51314 43111.27992 33950.45256 35415.34634 28826.03224 28067.90361 20494.97382 31176.403 2.218150617 1.225039411 1.503685757 1.382817637 1.088979141 1.135966402 0.924610586 0.9002932 0.657387378 1 14.92816687 -1.522878745 0.328784888 0.834686446 12.90804953 0.777624389 0.19324398 27.11940555 0.386222026 0.174774679 198.7064578 0.03 1.522878745 12.07336309 up GAAEEAELEDS(ph)DDEEKPVKQDDFPK ddPTM_A459_MK2206_30min_R2 1 GAAEEAELEDSDDEEKPVKQDDFPK 25 2 Q9UBB9;F6XM96 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 GAAEEAELEDS(1)DDEEKPVKQDDFPK 52.144 0.0098604 6434400 19416 22666 19668 14268 18833 10968 20191 19072 13905 22249 TRUE FALSE 20902.50389 21540.4394 20323.7213 13102.25876 18093.52179 11385.39493 17539.89745 21564.77588 15114.43177 21523.01695 0.971169792 1.00080948 0.94427846 0.608755677 0.84065918 0.528986942 0.814936748 1.001940199 0.702245034 1 14.3935927 -3.11925559 11.07565677 0.83282365 1.000827151 0 0.166218146 0 0 0.039238558 0 0.000759879 3.11925559 0.168003501 GAAEEEQQDS(ph)GSEPR ddPTM_A459_MK2206_30min_R1 2 GAAEEEQQDSGSEPR 15 0 D6RGI7;A0A499FJW5;Q9UJV9 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 1 GAAEEEQQDS(0.971)GS(0.029)EPR;GAAEEEQQDS(0.993)GS(0.007)EPR 189.59 2.64E-05 2446900 917.99 860.89 783.42 584.98 748.55 481.15 790.44 603.77 1019.6 1018.63 TRUE FALSE 839.9101299 804.8459045 730.2436331 630.035261 718.7336684 508.3922972 737.7111898 598.4913025 1125.591069 1144.825575 0.733657728 0.703029284 0.637864535 0.550332972 0.627810633 0.444078389 0.644387413 0.522779466 0.983198745 1 10.16091209 -8.270139073 24.40433425 0.991599518 0.606644149 0.783533257 0.080649143 230.5234195 646652.2989 0.076505512 0.021026586 5.37E-09 8.270139073 -0.384955369 GAAEEEQQDS(ph)GSEPR ddPTM_A459_MK2206_30min_R2 3 GAAEEEQQDSGSEPR 15 0 D6RGI7;A0A499FJW5;Q9UJV9 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 1 GAAEEEQQDS(0.994)GS(0.006)EPR;GAAEEEQQDS(0.988)GS(0.012)EPR;GAAEEEQQDS(1)GSEPR 178.02 2.56E-09 1568500 11815.1 7242.5 9611.6 9778.1 7764.7 8146.1 10485.9 7279 8081.5 9610.6 TRUE FALSE 12719.67314 6882.847982 9932.045947 8979.197951 7459.818864 8456.105544 9109.088734 8230.390293 8784.414262 9297.006909 1.368147111 0.740329447 1.068305751 0.965815992 0.8023893 0.909551389 0.979787239 0.885273118 0.944864766 1 13.18255061 -4.746435514 24.99671034 0.921877316 1.368148298 0.685950045 0.090601277 461.0492239 768073.6849 0.0215919 0.493288284 1.79E-05 4.746435514 0.446270982 GAAGGAS(ph)TPTPQHGEEK ddPTM_A459_MK2206_30min_R1 1 GAAGGASTPTPQHGEEK 17 0 O60299-2;O60299 O60299-2 LZTS3 Leucine zipper putative tumor suppressor 3 1 GAAGGAS(0.478)T(0.478)PT(0.043)PQHGEEK 120.79 0.0009611 4617400 1879.6 2017.2 1898.8 1699.2 2180.7 2111.4 2279.8 2018.7 1489.3 1778.7 TRUE FALSE 1719.73015 1885.879913 1769.914746 1830.072678 2093.838101 2230.945643 2127.718702 2001.050719 1644.118065 1999.058784 0.860269925 0.94338392 0.885374037 0.915467165 1.047411971 1.115998019 1.064360247 1.000996436 0.822446082 1 10.96510518 -6.191476362 6.01958325 1.016614031 0.901745823 0.331668952 0.074269414 0.284805264 19.07754801 0.023554433 0.030481206 6.43E-07 6.191476362 -0.114868207 GAAGGAS(ph)TPTPQHGEEK ddPTM_A459_MK2206_30min_R2 2 GAAGGASTPTPQHGEEK 17 0 O60299-2;O60299 O60299-2 LZTS3 Leucine zipper putative tumor suppressor 3 1 GAAGGAS(0.493)T(0.493)PT(0.014)PQHGEEK;GAAGGAS(0.489)T(0.489)PT(0.023)PQHGEEK 111.09 0.0013645 6979400 40776 44503 38809 51847 40619 36659 48960 40801 36511 47799 TRUE FALSE 43897.84191 42293.04573 40102.87269 47610.93425 39024.09397 38054.08393 42531.49319 46133.83079 39686.66078 46239.32254 0.949361701 0.914655393 0.867289365 1.029663317 0.843959034 0.822981001 0.919812204 0.997718571 0.858288111 1 15.49683264 -11.09683169 5.399168332 1.000440849 0.911978382 0.149417609 0.063319895 0.000339346 2.68E-05 0.061917031 0.01494269 8.00E-12 11.09683169 -0.088462467 GAANAS(ph)GSSPDAPAK ddPTM_A459_MK2206_30min_R1 1 GAANASGSSPDAPAK 15 0 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 GAANAS(0.652)GS(0.303)S(0.046)PDAPAK 120.21 0.0018186 6646500 3551.7 3573 3534.4 2789.1 3648 3588.2 3439.7 3293 3552.1 3005.4 TRUE FALSE 3249.609264 3340.397051 3294.494775 3003.916965 3502.692435 3791.360783 3210.243889 3264.209648 3921.353506 3377.731642 0.962068515 0.988946845 0.97535717 0.88932967 1.036995477 1.122457668 0.950414133 0.966391056 1.160942882 1 11.721839 -6.342152159 14.34932906 1.037563747 0.957961822 0.291715956 0.065185279 3.00746186 532.3490639 0.020465947 0.023205668 4.55E-07 6.342152159 -0.079601925 GAANASGSS(ph)PDAPAK ddPTM_A459_MK2206_30min_R1 2 GAANASGSSPDAPAK 15 0 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 GAANAS(0.008)GS(0.29)S(0.702)PDAPAK;GAANAS(0.009)GS(0.229)S(0.762)PDAPAK 197.94 2.67E-05 11048400 5962.9 4956.3 5327.1 3884.5 4918.7 4777.9 6544.3 4483.9 5741.7 6191.2 TRUE FALSE 5455.724043 4633.643969 4965.511294 4183.684863 4722.777763 5048.420569 6107.741688 4444.697735 6338.570262 6958.212597 0.784069754 0.66592446 0.713618796 0.601258557 0.67873433 0.725534108 0.877774515 0.638770039 0.910948059 1 12.76450104 -8.57249907 0.647351539 1.006350842 0.689039405 0.587715509 0.079558341 0.614362812 0.587582819 0.080137957 0.032698228 2.68E-09 8.57249907 -0.317311437 GAANASGSS(ph)PDAPAK ddPTM_A459_MK2206_30min_R2 2 GAANASGSSPDAPAK 15 0 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 GAANASGS(0.146)S(0.854)PDAPAK;GAANAS(0.001)GS(0.176)S(0.823)PDAPAK 169.15 6.13E-05 17750800 85426 75007 73685 82249 81904 71412 92868 74032 58650 88536 TRUE FALSE 91966.28024 71282.26145 76141.62112 75528.9936 78688.03743 74129.6337 80674.32005 83708.23659 63751.27099 85647.07757 1.073781883 0.832278969 0.889015986 0.881863056 0.918747489 0.86552438 0.94193897 0.977362439 0.744348468 1 16.3861164 -4.274682287 0.000981429 1.638819466 0.17264104 0 0.087945248 12488950.93 1646.624768 1220281.676 1239712.21 5.31E-05 4.274682287 -1.466178426 GAANASGSS(ph)PDAPAKDAR ddPTM_A459_MK2206_30min_R1 1 GAANASGSSPDAPAKDAR 18 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 GAANAS(0.015)GS(0.088)S(0.897)PDAPAKDAR 93.255 0.0025753 2641300 751 694.23 901.17 812.39 1188.7 866.26 949.02 927.46 535.37 326.33 TRUE FALSE 687.1235063 649.0355008 840.0010912 874.9604186 1141.351562 915.3068926 885.7126074 919.351315 591.0236273 366.7582241 1.873505381 1.769654934 2.290340164 2.385659983 3.111999914 2.495668352 2.414976814 2.506695841 1.61148023 1 8.518685507 -5.293162422 6.062483904 2.336194961 1.820258349 0.053446209 0.546136323 0.351677048 42.4117677 0.138516053 0.305643847 5.09E-06 5.293162422 -0.515936612 GAAPPDS(ph)PVVYSDR ddPTM_A459_MK2206_30min_R1 2 GAAPPDSPVVYSDR 14 0 B4DEY6;Q9NZU5-2;Q9NZU5 B4DEY6 LMCD1 LIM and cysteine-rich domains protein 1 1 GAAPPDS(0.999)PVVYS(0.001)DR;GAAPPDS(0.99)PVVYS(0.01)DR 182.7 7.63E-05 12835300 4563.1 4406.5 4415.4 4180 4746.8 4133.1 4295.3 4167.3 3599.7 3015.4 TRUE FALSE 4174.984383 4119.636049 4115.69495 4501.944324 4557.724904 4367.11255 4008.768374 4130.865735 3973.901697 3388.970517 1.231932931 1.215601029 1.21443811 1.32841059 1.344870037 1.288625123 1.182886766 1.218914627 1.172598486 1 11.72663137 -8.741120557 0.823713882 1.000276199 1.266353728 0.740025356 0.046806785 0.529463107 0.72940072 0.052356315 0.018354378 1.82E-09 8.741120557 0.266077528 GAAPPDS(ph)PVVYSDR ddPTM_A459_MK2206_30min_R2 2 GAAPPDSPVVYSDR 14 0 B4DEY6;Q9NZU5-2;Q9NZU5 B4DEY6 LMCD1 LIM and cysteine-rich domains protein 1 1 GAAPPDS(0.994)PVVYS(0.006)DR;GAAPPDS(0.987)PVVYS(0.013)DR 143.88 0.00053437 24518000 57557 93486 83254 94047 82938 85633 80879 79880 77663 85046 TRUE FALSE 61963.60817 88843.62118 86029.64681 86363.05926 79681.43739 88891.82382 70259.49015 90320.59027 84417.98736 82270.95598 0.753165044 1.079890468 1.045686728 1.049739343 0.968524511 1.080476369 0.854001139 1.097842965 1.026097076 1 16.32809559 -4.753833773 24.99997982 1.021970217 0.753164565 0.58957704 0.067407562 189.8907696 624128.6915 0.016132458 0.167167617 1.76E-05 4.753833773 -0.268805652 GAAPT(ph)PPGK ddPTM_A459_MK2206_30min_R1 2 GAAPTPPGK 9 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GAAPT(1)PPGK;GAAPT(1)PPGK 113.44 0.021306 18795400 15777.5 15004.1 13879.1 12194.8 15054.7 12847.9 14357.6 13436.2 14197.7 14111.9 TRUE FALSE 14435.54077 14027.33036 12937.02536 13134.04561 14455.03942 13575.337 13399.8307 13318.72872 15673.60172 15860.18871 0.910174591 0.884436536 0.815691767 0.828114082 0.911403999 0.855937924 0.844872085 0.839758528 0.988235513 1 13.95312232 -8.268727997 23.94191034 0.994117821 0.860387497 0.749042593 0.030747942 172.4515087 566461.247 0.028804256 0.008084314 5.39E-09 8.268727997 -0.133730324 GAAPT(ph)PPGK ddPTM_A459_MK2206_30min_R2 1 GAAPTPPGK 9 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GAAPT(1)PPGK 108.47 0.028043 6098300 85946 103230 89910 94936 92155 83889 108490 68388 78316 84810 TRUE FALSE 92526.09184 98103.74831 92907.55453 87179.42511 88536.53166 87081.45468 94245.13268 77326.54641 85127.78412 82042.65665 1.127780299 1.195765134 1.132429864 1.062610948 1.079152422 1.061416807 1.148733312 0.942516364 1.037603944 1 16.32408659 -6.115071222 0.326349431 0.988513285 1.216154544 0.51826411 0.049513613 2.426486296 0.399451032 0.058761738 0.205693525 7.67E-07 6.115071222 0.227641259 GAAQENGAPECS(ph)PR ddPTM_A459_MK2206_30min_R1 1 GAAQENGAPECSPR 14 0 Q6IE81-2;Q6IE81;Q6IE81-3 Q6IE81-2 JADE1 Protein Jade-1 1 GAAQENGAPECS(1)PR 181.97 7.54E-05 4707700 1839.2 2293.7 1936.5 1637.3 1877.8 1961.7 2135.4 1504.2 1707.6 1755.9 TRUE FALSE 1682.766382 2144.379713 1805.055775 1763.40513 1803.00325 2072.769759 1992.951362 1491.048938 1885.111131 1973.434148 0.85270967 1.086623394 0.914677481 0.893571813 0.913637403 1.05033642 1.009889975 0.755560523 0.955244001 1 10.94649266 GAAQENGAPECS(ph)PR ddPTM_A459_MK2206_30min_R2 2 GAAQENGAPECSPR 14 0 Q6IE81-2;Q6IE81;Q6IE81-3 Q6IE81-2 JADE1 Protein Jade-1 1 GAAQENGAPECS(1)PR;GAAQENGAPECS(1)PR 157.07 0.0003161 15248100 47907 55527 48535 64797 55847 60574 59311 41527 45270 52058 TRUE FALSE 51574.79675 52769.60992 50153.13268 59502.87782 53654.16617 62879.18602 51523.39445 46954.72148 49207.50277 50359.35172 1.024135438 1.047861184 0.99590505 1.181565604 1.06542607 1.248609918 1.023114728 0.932393287 0.977127407 1 15.61997209 -7.518379419 24.83065549 0.968406975 1.09387468 0.380492624 0.071688227 194.8162412 1075162.823 0.033769562 0.020149925 3.03E-08 7.518379419 0.125467705 GAAS(ph)PGPSR ddPTM_A459_MK2206_30min_R2 2 GAASPGPSR 9 0 M0QZR4;Q92888-2;Q92888;Q92888-3;Q92888-4 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 GAAS(1)PGPSR;GAAS(0.991)PGPS(0.009)R 102.06 0.016467 4484200 47373 16057.7 22657 25953 28039 17352.4 27860 65655 42299 46208 TRUE FALSE 50999.9133 15260.29797 23412.37307 23832.55688 26938.04798 18012.75774 24201.94853 74236.33393 45978.09056 44700.23674 1.140931615 0.341391882 0.523763961 0.533163997 0.602637703 0.402967838 0.541427748 1.660759301 1.028587182 1 15.44799485 -7.740035551 24.90452753 1.258504881 0.563952867 0.556462854 0.263517912 139.7766305 162638.0868 0.116914809 0.067417706 1.82E-08 7.740035551 -0.694552014 GAAS(ph)PVLQEDHCDSLPSVLQVEEK ddPTM_A459_MK2206_30min_R1 2 GAASPVLQEDHCDSLPSVLQVEEK 24 0 Q8N9B5-2;Q8N9B5 Q8N9B5-2 JMY Junction-mediating and -regulatory protein 1 GAAS(1)PVLQEDHCDSLPSVLQVEEK;GAAS(1)PVLQEDHCDSLPSVLQVEEK 145.33 1.44E-09 41160000 3788.3 3393.6 3214.07 2786.1 3383.38 3376.11 3749.23 2839.05 3101.59 3124.02 TRUE FALSE 3466.085192 3172.676023 2995.907883 3000.685905 3248.61281 3567.262431 3499.125708 2814.228485 3424.01138 3511.047183 0.987194137 0.903626713 0.85328044 0.854641293 0.925254672 1.016010963 0.996604581 0.801535365 0.975210871 1 11.77768567 -6.520148148 24.97758972 0.950416161 0.895814425 0.142213599 0.066023121 244.9570123 2240722.114 0.022610775 0.023011807 3.02E-07 6.520148148 -0.054601736 GAAS(ph)PVLQEDHCDSLPSVLQVEEK ddPTM_A459_MK2206_30min_R2 4 GAASPVLQEDHCDSLPSVLQVEEK 24 0 Q8N9B5-2;Q8N9B5 Q8N9B5-2 JMY Junction-mediating and -regulatory protein 1 GAAS(1)PVLQEDHCDSLPSVLQVEEK;GAAS(1)PVLQEDHCDSLPSVLQVEEK;GAAS(1)PVLQEDHCDSLPSVLQVEEK;GAAS(0.98)PVLQEDHCDS(0.02)LPSVLQVEEK 163.09 2.54E-13 69610000 171264 201904 181545 219069 196614 178944 215494 170564 162193 200988 TRUE FALSE 184376.1035 191877.741 187597.6197 201170.3619 188893.9465 185753.8393 187199.3789 192857.3004 176300.254 194429.778 0.948291488 0.986874248 0.964860535 1.034668475 0.971527862 0.955377521 0.962812286 0.991912362 0.906755415 1 17.56888967 GAAS(ph)PVPPPLVR ddPTM_A459_MK2206_30min_R1 1 GAASPVPPPLVR 12 0 Q4G0W2 Q4G0W2 DUSP28 Dual specificity phosphatase 28 1 GAAS(1)PVPPPLVR 77.674 0.045401 3455600 993.07 1406.2 1160.5 965.97 1420.3 1119 1390.5 1246.1 955.13 918.12 TRUE FALSE 908.6041817 1314.656124 1081.728493 1040.369177 1363.726443 1182.356813 1297.742282 1235.205479 1054.419181 1031.863637 0.880546759 1.274059941 1.048325045 1.008242891 1.321614983 1.145845992 1.257668393 1.197062707 1.021859036 1 10.01103661 -4.744015056 24.7869496 1.150087396 0.880545848 0.321635051 0.113151869 1155.890474 1644213.203 0.027645846 0.811099787 1.80E-05 4.744015056 -0.269541548 GAAS(ph)PVPPPLVR ddPTM_A459_MK2206_30min_R2 2 GAASPVPPPLVR 12 0 Q4G0W2 Q4G0W2 DUSP28 Dual specificity phosphatase 28 1 GAAS(1)PVPPPLVR;GAAS(1)PVPPPLVR 111.52 0.0067616 6149000 25889 34023 26782 34560 36355 35470 35760 28648 24529.4 30074 TRUE FALSE 27871.08175 32333.46729 27674.89851 31736.33745 34927.52003 36819.83571 31064.66904 32392.39196 26662.92287 29092.68784 0.958009858 1.111394982 0.951266472 1.090869899 1.200560093 1.265604467 1.067782709 1.113420394 0.916481936 1 14.82836897 -4.75532928 24.8054324 1.088801468 0.95800962 0.11002021 0.100899712 425.5406881 1727398.57 0.026302145 0.235625122 1.76E-05 4.75532928 -0.130791848 GAASTLVPGVSET(ph)SASPGSPSVR ddPTM_A459_MK2206_30min_R1 1 GAASTLVPGVSETSASPGSPSVR 23 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 GAASTLVPGVS(0.045)ET(0.49)S(0.322)AS(0.141)PGS(0.001)PSVR 198.88 1.90E-22 6586900 3507.4 3182 2945.9 2659.9 3751.9 3674.8 3460.8 3124.1 3150.5 2571.7 TRUE FALSE 3209.077212 2974.851222 2745.940516 2864.765959 3602.453878 3882.864 3229.936347 3096.786323 3478.005749 2890.301611 1.110291466 1.029252868 0.950053276 0.991165056 1.246393755 1.343411354 1.117508406 1.071440541 1.203336612 1 11.49700433 -6.250475897 24.72462284 1.173931616 1.015828143 0.344168611 0.096341661 707.0770914 1594584.981 0.029890521 0.038182023 5.62E-07 6.250475897 -0.158103473 GAASTLVPGVSET(ph)SASPGSPSVR ddPTM_A459_MK2206_30min_R2 1 GAASTLVPGVSETSASPGSPSVR 23 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 GAASTLVPGVS(0.054)ET(0.821)S(0.04)AS(0.052)PGS(0.031)PS(0.001)VR 131.31 8.06E-06 0 12167 14637 16419 21020 16867 16915 18509 14039 16190 17220 TRUE FALSE 13098.51487 13910.14786 16966.40127 19302.59876 16204.71683 17558.71218 16078.74607 15873.9455 17598.17694 16658.11281 0.786314454 0.835037439 1.018506806 1.158750633 0.972782272 1.054063709 0.965220145 0.952925802 1.056432811 1 14.02393735 -5.22019365 4.231511966 1.023448093 0.800820764 0.692273302 0.056760078 0.119009464 4.784743274 0.015316519 0.04276473 6.02E-06 5.22019365 -0.222627329 GAASTLVPGVSETS(ph)ASPGSPSVR ddPTM_A459_MK2206_30min_R2 1 GAASTLVPGVSETSASPGSPSVR 23 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 GAASTLVPGVSET(0.09)S(0.51)AS(0.374)PGS(0.025)PSVR 270.73 6.51E-66 24255000 56485 79718 57260 74721 80287 82725 79219 56640 51786 68851 TRUE FALSE 60809.53503 75759.32004 59169.01982 68616.05528 77134.52897 85873.15784 68817.45014 64043.04247 56290.25267 66604.39751 0.912995798 1.137452223 0.888365063 1.030203077 1.158099643 1.289301624 1.033226825 0.961543755 0.845143185 1 16.02332981 -7.779636567 3.654643662 0.920238489 1.07267363 0.211850976 0.115247524 0.352824446 9.963733548 0.070258472 0.033342183 1.66E-08 7.779636567 0.152435141 GAASTLVPGVSETSAS(ph)PGSPSVR ddPTM_A459_MK2206_30min_R1 2 GAASTLVPGVSETSASPGSPSVR 23 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 GAASTLVPGVS(0.067)ET(0.045)S(0.031)AS(0.596)PGS(0.254)PS(0.007)VR;GAASTLVPGVSET(0.032)S(0.177)AS(0.757)PGS(0.034)PSVR 249.26 6.41E-45 27403900 6040.2 5963.2 5432.2 4981.3 6838.9 5990.5 5915.2 5174.2 5371.1 4513.8 TRUE FALSE 5526.449272 5574.994596 5063.477399 5364.960589 6566.492131 6329.676933 5520.607801 5128.962515 5929.445066 5073.003621 1.089384058 1.098953404 0.998122173 1.057551106 1.29439926 1.247717803 1.088232576 1.011030722 1.168823346 1 12.30862448 GAASTLVPGVSETSAS(ph)PGSPSVR ddPTM_A459_MK2206_30min_R2 2 GAASTLVPGVSETSASPGSPSVR 23 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 GAASTLVPGVS(0.001)ET(0.09)S(0.037)AS(0.872)PGS(0.001)PSVR;GAASTLVPGVS(0.003)ET(0.002)S(0.01)AS(0.736)PGS(0.233)PS(0.016)VR 228.11 7.14E-31 20316000 72706 79307 72367 86035 88753 74089 90381 68358 72809 74833 TRUE FALSE 78272.42726 75368.7297 74779.67966 79005.66529 85268.11127 76908.50881 78513.86613 77292.62531 79141.79521 72391.20534 1.081242216 1.041131023 1.032993985 1.091371043 1.177879424 1.062401274 1.084577412 1.067707395 1.093251519 1 16.14352682 -5.77594278 24.90285429 1.088505412 1.05072327 0.085617573 0.042800488 440.229177 755887.4036 0.011987716 0.017868577 1.68E-06 5.77594278 -0.037782142 GAASTLVPGVSETSASPGS(ph)PSVR ddPTM_A459_MK2206_30min_R1 1 GAASTLVPGVSETSASPGSPSVR 23 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 GAASTLVPGVS(0.01)ET(0.035)S(0.017)AS(0.151)PGS(0.735)PS(0.051)VR 186.58 4.42E-22 25131000 3290.6 3580.2 3295.3 3295.9 3144.8 3074.4 3526 3098.5 2939 2470.9 TRUE FALSE 3010.71719 3347.128329 3071.624217 3549.750789 3019.535957 3248.469871 3290.786974 3071.410141 3244.519567 2777.013746 1.084156387 1.205297717 1.106088949 1.278261872 1.087332017 1.169770901 1.185009249 1.106011861 1.1683484 1 11.4393186 -10.83746199 0.503052493 0.927902772 1.159642658 0.388462436 0.057934142 30.27200301 3.864030288 2.97695602 0.025733678 1.45E-11 10.83746199 0.231739886 GAASTLVPGVSETSASPGS(ph)PSVR ddPTM_A459_MK2206_30min_R2 2 GAASTLVPGVSETSASPGSPSVR 23 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 GAASTLVPGVS(0.001)ET(0.01)S(0.005)AS(0.213)PGS(0.771)PS(0.001)VR;GAASTLVPGVS(0.005)ET(0.123)S(0.021)AS(0.334)PGS(0.485)PS(0.031)VR 201.95 4.95E-23 8647100 51908 60456 54491 73607 61632 65618 70552 58481 59496 63903 TRUE FALSE 55882.11639 57453.84295 56307.70274 67593.07264 59212.018 68115.13897 61288.43765 66124.6675 64670.85454 61817.85034 0.903980259 0.929405384 0.910864781 1.093423215 0.957846604 1.10186845 0.991435925 1.069669475 1.046151786 1 15.91573587 -5.74605277 24.99891926 1.037583615 0.916215607 0.628515832 0.043134626 143.38227 232954.0208 0.010753422 0.018536318 1.79E-06 5.74605277 -0.121368009 GACST(ph)PDMPQFEPVK ddPTM_A459_MK2206_30min_R1 1 GACSTPDMPQFEPVK 15 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GACS(0.023)T(0.977)PDMPQFEPVK 187.63 5.60E-05 14342000 1535.5 1524.7 1256.3 681.26 1184.6 1155 1810.8 1085 1762 2537.4 TRUE FALSE 1404.897662 1425.441753 1171.025856 733.7307632 1137.414874 1220.395102 1690.004836 1075.513959 1945.166205 2851.752268 0.492643655 0.499847679 0.410633795 0.2572912 0.398847714 0.427945693 0.592619792 0.377141441 0.682095085 1 11.47763295 -8.558957945 2.63747834 0.999794962 0.431375926 0.816148285 0.08438013 0.125179293 2.127657599 0.086752833 0.023396086 2.76E-09 8.558957945 -0.568419035 down GACST(ph)PDMPQFEPVK ddPTM_A459_MK2206_30min_R2 10 GACSTPDMPQFEPVK 15 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GACS(0.1)T(0.9)PDMPQFEPVK;GACS(0.102)T(0.898)PDMPQFEPVK;GACS(0.111)T(0.889)PDMPQFEPVK;GACS(0.107)T(0.893)PDMPQFEPVK;GACS(0.101)T(0.899)PDMPQFEPVK;GACS(0.095)T(0.905)PDMPQFEPVK;GACS(0.04)T(0.96)PDMPQFEPVK;GACS(0.143)T(0.857)PDMPQFEPVK;GACS(0.128)T(0.872)PDMPQFEPVK;GACS(0.251)T(0.749)PDMPQFEPVK 297.45 4.65E-80 161153500 1034055 803928.1 810731 916072 585030.6 660827 943093 724057 602837 948094 TRUE FALSE 1113223.046 764006.1996 837760.3669 841225.9872 562059.3591 685975.2345 819263.7562 818693.736 655270.6726 917157.7704 1.213774862 0.833015021 0.91343103 0.917209682 0.612827342 0.747935913 0.893263714 0.892642207 0.714457963 1 19.8068104 -2.524047552 1.354321032 0.820964694 199.9514496 0.502444236 0.110791247 597.0351804 2.867960169 0.032037182 367515.1018 0.002991937 2.524047552 199.1304849 GACST(ph)PDMPQFEPVKTETMTVSSLAIR ddPTM_A459_MK2206_30min_R2 2 GACSTPDMPQFEPVKTETMTVSSLAIR 27 1 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GACS(0.193)T(0.807)PDMPQFEPVKTETMTVSSLAIR;GACS(0.204)T(0.796)PDMPQFEPVKTETMTVSSLAIR 108.73 2.10E-09 26331000 37513 49247 50160 66072 48231 58749 54262 40548 62075 48014 TRUE FALSE 40385.02412 46801.46559 51832.30936 60673.70625 46337.2086 60984.73436 47137.33422 45847.76282 67474.17129 46447.30711 0.869480421 1.007624952 1.115937879 1.306291151 0.997629604 1.312987515 1.014856127 0.987091947 1.452703622 1 15.50330734 -5.001936504 2.215750404 1.15006827 0.856848578 0.255410366 0.152980074 0.557074238 4.419643235 0.039402131 0.270116957 9.96E-06 5.001936504 -0.293219692 GADAGSSGGTGPTEGYS(ph)PPAASTR ddPTM_A459_MK2206_30min_R1 5 GADAGSSGGTGPTEGYSPPAASTR 24 0 J3KT76;J3KSI9;Q969W3;Q969W3-2 J3KT76 FAM104A Protein FAM104A 1 GADAGSSGGTGPT(0.001)EGYS(0.998)PPAASTR;GADAGSSGGT(0.015)GPT(0.021)EGYS(0.964)PPAASTR;GADAGSSGGTGPTEGY(0.09)S(0.909)PPAASTR;GADAGSSGGTGPT(0.001)EGYS(0.999)PPAASTR;GADAGSSGGTGPT(0.001)EGYS(0.997)PPAAS(0.001)TR 319.31 2.80E-149 44954000 4232.48 4040.19 3747.24 3240.76 4706.74 3898.42 3935.72 4151.88 3357.87 3577.05 TRUE FALSE 3872.48535 3777.172897 3492.887789 3490.363897 4519.260579 4119.145171 3673.1753 4115.580551 3706.932603 4020.201959 0.963256421 0.939548046 0.86883391 0.868206108 1.124137699 1.024611503 0.913679297 1.023724826 0.922076214 1 11.97305226 -6.203916635 24.99997179 0.999336105 0.909136808 0.349528435 0.061048501 338.7689695 147232.0896 0.018690966 0.024129922 6.25E-07 6.203916635 -0.090199298 GADAGSSGGTGPTEGYS(ph)PPAASTR ddPTM_A459_MK2206_30min_R2 4 GADAGSSGGTGPTEGYSPPAASTR 24 0 J3KT76;J3KSI9;Q969W3;Q969W3-2 J3KT76 FAM104A Protein FAM104A 1 GADAGSSGGTGPT(0.008)EGY(0.001)S(0.991)PPAASTR;GADAGSSGGTGPTEGYS(1)PPAASTR;GADAGSSGGTGPTEGYS(1)PPAASTR;GADAGSSGGTGPTEGY(0.001)S(0.999)PPAASTR 215.59 1.31E-36 32065200 48120.8 55979.4 52321.5 60961 58738.2 68312.3 63040.5 43728.7 60566.3 50653 TRUE FALSE 51804.96545 53199.5444 54065.8727 55980.2913 56431.84313 70911.97245 54763.20662 49444.19123 65834.2473 49000.19676 1.057239947 1.085700628 1.103380726 1.142450337 1.151665644 1.4471773 1.117611974 1.009061075 1.343550672 1 15.58049992 -5.853741906 1.991798903 1.187305722 1.075572405 0.100959316 0.128611183 0.763891821 6.183055011 0.040601527 0.073465122 1.40E-06 5.853741906 -0.111733318 GADFLVTEVENGGS(ph)LGSK ddPTM_A459_MK2206_30min_R1 1 GADFLVTEVENGGSLGSK 18 0 P14618;P14618-3;B4DNK4;H3BQ34;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 GADFLVTEVENGGS(0.996)LGS(0.004)K 164.97 9.65E-07 3377200 1364.4 1324.3 1556 1180.6 1333.6 1312.8 1726.1 1320.4 1533.5 1449.3 TRUE FALSE 1248.350615 1238.087829 1450.383055 1271.530017 1280.479888 1387.129602 1610.955018 1308.855882 1692.912813 1628.850226 0.766399879 0.760099247 0.890433652 0.780630408 0.786125003 0.85160046 0.989013596 0.803545876 1.039329943 1 10.66963824 -7.56469144 0.572812348 1.00877397 0.783528647 0.573953036 0.066126471 0.616239518 0.42200961 0.062111745 0.040441805 2.72E-08 7.56469144 -0.225245323 GADFLVTEVENGGSLGS(ph)K ddPTM_A459_MK2206_30min_R1 1 GADFLVTEVENGGSLGSK 18 0 P14618;P14618-3;B4DNK4;H3BQ34;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 GADFLVTEVENGGS(0.013)LGS(0.987)K 145.82 0.00025997 4070000 1736.1 1745.4 2190 1546.3 1799.3 1384.4 2322.8 1925.9 1769 1876.3 TRUE FALSE 1588.435578 1631.774143 2041.348902 1665.396294 1727.630071 1462.783532 2167.85025 1909.062059 1952.89388 2108.750209 0.753259239 0.773811016 0.96803732 0.789755129 0.819267291 0.693673212 1.028026098 0.905304977 0.926090663 1 11.0421725 -7.271361768 24.9996564 0.956964182 0.806558197 0.547521514 0.073279799 623.7057727 1571432.956 0.031183359 0.021310451 5.35E-08 7.271361768 -0.150405984 GADFLVTEVENGGSLGS(ph)K ddPTM_A459_MK2206_30min_R2 1 GADFLVTEVENGGSLGSK 18 0 P14618;P14618-3;B4DNK4;H3BQ34;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 GADFLVTEVENGGS(0.324)LGS(0.676)K 174.19 2.19E-08 1741600 18930 19869 16440 21578 17207 17280 24246 17911 16785 19168 TRUE FALSE 20379.29535 18882.33435 16988.10139 19815.00838 16531.36672 17937.60251 21062.47108 20252.0292 18244.92896 18542.54973 1.099055721 1.01832459 0.916168577 1.068623715 0.891536869 0.967375187 1.135899398 1.092192255 0.983949307 1 14.17855202 -7.227799222 24.77889514 1.060692982 0.989904892 0.13880181 0.071246461 989.3041183 728709.5402 0.027413533 0.021233045 5.92E-08 7.227799222 -0.07078809 GADNDGS(ph)GSESGYTT(ph)PK ddPTM_A459_MK2206_30min_R1 1 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 2 GADNDGS(0.982)GS(0.007)ES(0.011)GYT(0.026)T(0.975)PK 115.2 0.019448 0 1434.7 1557.7 1683.5 1392 1230.6 988.12 1131.5 1060.8 1545.9 1504.9 TRUE FALSE 1312.671231 1456.293447 1569.22871 1499.212081 1181.582596 1044.0665 1056.0197 1051.525537 1706.601837 1691.338373 0.776113906 0.861030217 0.927802937 0.886405763 0.698608046 0.617301964 0.624369266 0.621712103 1.009024488 1 10.7239496 -4.404682655 13.9546372 0.786826104 0.299500343 0 0.148420947 2112793.508 2639562.307 0.038985447 32015699.97 3.94E-05 4.404682655 -0.48732576 GADNDGS(ph)GSESGYTT(ph)PK ddPTM_A459_MK2206_30min_R2 1 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 2 GADNDGS(0.99)GS(0.01)ESGYT(0.313)T(0.687)PK 156.08 0.0081979 4550400 28212 32560 29783 26668 30997 19950 31192 25136 27531 35057 TRUE FALSE 30371.93241 30943.11775 30775.95036 24489.13909 29779.90203 20709.21123 27096.45293 28421.3615 29925.59662 33913.09296 0.895581316 0.912423936 0.907494648 0.722114586 0.878124035 0.610655338 0.798996805 0.838064565 0.882420151 1 15.04955475 -5.722441628 24.67905445 0.804873627 0.905892594 0.131274035 0.097627311 239.9552258 151849.5071 0.025851608 0.04478041 1.89E-06 5.722441628 0.101018967 GADNDGS(ph)GSESGYTTPK ddPTM_A459_MK2206_30min_R1 2 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGS(0.596)GS(0.404)ESGYTTPK;GADNDGS(0.947)GS(0.053)ES(0.001)GYTTPK 261.02 2.88E-40 217197600 14121.9 13803 14473.3 12918.8 12704.5 10966.7 13438.3 12841.1 11855.5 10433 TRUE FALSE 12920.75825 12904.42219 13490.89272 13913.80821 12198.45286 11587.62508 12541.85553 12728.83162 13087.92165 11725.51881 1.101934888 1.100541682 1.150558278 1.186626233 1.040333743 0.988239861 1.06962052 1.085566603 1.116191264 1 13.51736414 -6.280864325 24.93806229 1.052164143 1.133577374 0.494429855 0.042026695 763.3321453 979975.9071 0.014075762 0.015985128 5.24E-07 6.280864325 0.081413231 GADNDGS(ph)GSESGYTTPK ddPTM_A459_MK2206_30min_R2 1 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGS(0.992)GS(0.008)ESGYTTPK 105.01 0.0027 82724000 26613 26348 23945 27886 25423 24002 32190 21258 25809 24295 TRUE FALSE 28650.51174 25039.59663 24743.31435 25607.6246 24424.76528 24915.41293 27963.41433 24036.49359 28053.82017 23502.25614 1.219053676 1.065412464 1.052805918 1.089581547 1.03925194 1.060128559 1.189818295 1.022731326 1.193664983 1 14.52051164 -4.757474772 24.98323704 1.081078204 1.219053877 0.317252916 0.061468362 138.1434511 870398.6003 0.014296835 0.106354448 1.75E-05 4.757474772 0.137975673 GADNDGSGS(ph)ESGYTT(ph)PK ddPTM_A459_MK2206_30min_R1 1 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 2 GADNDGS(0.017)GS(0.845)ES(0.137)GYT(0.019)T(0.982)PK 130.38 0.0069906 0 2326.2 2258.7 2602.6 2157.7 1523.4 1442.1 1849.6 2085.9 2063 1666.1 TRUE FALSE 2128.344475 2111.658219 2425.942763 2323.886428 1462.719752 1523.750456 1726.216559 2067.663196 2277.456233 1872.509046 1.136627072 1.127715897 1.295557299 1.241054847 0.781154972 0.813747981 0.921873548 1.104220671 1.216259135 1 10.87075697 -6.235625491 24.86085597 0.967580539 1.201867068 0.43313063 0.127333772 764.7660011 736531.3719 0.04222947 0.054498737 5.81E-07 6.235625491 0.234286529 GADNDGSGS(ph)ESGYTT(ph)PK ddPTM_A459_MK2206_30min_R2 1 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 2 GADNDGS(0.185)GS(0.766)ES(0.049)GYT(0.312)T(0.688)PK 152.86 0.025969 12332000 44804 33805 37404 35350 40193 26491 41741 35519 28846 40081 TRUE FALSE 48234.22869 32126.29286 38651.03069 32461.79192 38614.82087 27499.13357 36260.35656 40161.45525 31354.97294 38773.16025 1.244010763 0.828570399 0.996850152 0.837223268 0.995916263 0.709231164 0.935192188 1.035805567 0.808677259 1 15.24277071 -4.753498246 24.99450192 0.904769291 1.244011381 0.503600927 0.10089064 234.6501345 738496.0702 0.023755169 0.254071235 1.76E-05 4.753498246 0.339242091 GADNDGSGS(ph)ESGYTTPK ddPTM_A459_MK2206_30min_R1 3 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGS(0.021)GS(0.976)ES(0.003)GYTTPK;GADNDGS(0.023)GS(0.95)ES(0.026)GYTTPK;GADNDGS(0.056)GS(0.942)ES(0.002)GYTTPK 223.93 2.30E-12 337133000 17777.5 17580.1 18894.1 16493.9 17082.6 15360.6 18430.6 16522.3 16308.5 14793.6 TRUE FALSE 16265.43027 16435.63229 17611.62113 17764.26304 16402.16387 16230.3039 17201.1283 16377.84727 18003.82694 16626.34285 0.978292726 0.988529615 1.059260072 1.068440799 0.986516639 0.976180032 1.034570768 0.985054105 1.082849493 1 14.02118325 -8.242254755 24.93411345 1.041424777 1.011467742 0.104199639 0.036997306 1724.220832 2240965.847 0.025881768 0.009732386 5.72E-09 8.242254755 -0.029957035 GADNDGSGS(ph)ESGYTTPK ddPTM_A459_MK2206_30min_R2 5 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGS(0.334)GS(0.665)ES(0.001)GYTTPK;GADNDGS(0.251)GS(0.69)ES(0.059)GYTTPK;GADNDGS(0.411)GS(0.589)ESGYTTPK;GADNDGS(0.395)GS(0.605)ESGYTTPK;GADNDGS(0.148)GS(0.706)ES(0.146)GYTTPK 238.05 1.88E-22 309127300 675012 786811 749221 758161 766299 722169 928716 666785 751995 835080 TRUE FALSE 726691.4377 747739.1099 774199.6542 696216.8211 736210.2509 749651.6473 806774.4736 753936.0889 817402.1658 807831.408 0.899558287 0.925612823 0.958367856 0.861834306 0.911341455 0.927980319 0.99869164 0.933283952 1.011847469 1 19.62369471 -7.124678008 4.348867395 0.980184787 0.912556108 0.580118991 0.029994024 0.186769236 5.740939493 0.011762388 0.009033041 7.50E-08 7.124678008 -0.067628679 GADNDGSGSESGYT(ph)TPK ddPTM_A459_MK2206_30min_R1 2 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGSGSESGYT(0.5)T(0.5)PK;GADNDGSGSESGYT(0.5)T(0.5)PK 203.93 5.26E-08 90801000 10386.4 11768.7 11496.2 9867.6 7657.7 6290.2 8058.3 8469.3 8607.4 8027 TRUE FALSE 9502.982139 11002.55549 10715.86997 10627.60426 7352.677594 6646.345688 7520.74551 8395.253803 9502.170032 9021.445361 1.053376899 1.219600081 1.187821856 1.178037868 0.815022128 0.736727367 0.833651949 0.930588555 1.053286879 1 13.13914288 -6.254816444 24.80502718 0.880439924 1.165995165 0.649725976 0.094860567 297.9513587 1115923.087 0.030186701 0.038064165 5.56E-07 6.254816444 0.285555242 GADNDGSGSESGYT(ph)TPK ddPTM_A459_MK2206_30min_R2 1 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGSGSESGYT(0.5)T(0.5)PK 188.71 1.61E-07 56914000 82665 85648 77476 68745 81491 58501 83422 68935 70156 76848 TRUE FALSE 88993.89596 81394.84486 80059.01117 63128.3136 78291.25388 60727.29655 72468.59119 77945.04119 76258.04207 74340.45605 1.197112591 1.094892999 1.076923864 0.849178455 1.053144654 0.816880872 0.974820374 1.048487531 1.02579465 1 16.18185992 -5.314755225 2.120419046 0.967303989 1.169370099 0.456396376 0.078944441 0.309979819 2.587933589 0.022230615 0.076208623 4.84E-06 5.314755225 0.202066111 GADNDGSGSESGYTT(ph)PK ddPTM_A459_MK2206_30min_R1 1 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGSGSESGYT(0.137)T(0.863)PK 121.27 0.0021992 0 819.73 998.22 959.06 918.96 676.01 863.7 622.98 734.32 910.11 719.81 TRUE FALSE 750.0076589 933.2356966 893.9616793 989.7384584 649.0830902 912.6019476 581.4221409 727.8999177 1004.719191 808.9854971 0.927096545 1.153587672 1.105040427 1.223431646 0.80234206 1.128081963 0.718705271 0.89976881 1.241949571 1 9.659970029 -6.252858299 24.97894285 0.955954952 1.106149774 0.154220988 0.15635489 1137.887925 3312312.538 0.045716567 0.05808673 5.59E-07 6.252858299 0.150194822 GADNDGSGSESGYTT(ph)PK ddPTM_A459_MK2206_30min_R2 1 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGSGSESGYT(0.109)T(0.891)PK 157.47 9.60E-05 66303000 146690 147070 150440 129740 148540 119270 155990 120510 124410 152030 TRUE FALSE 157920.6992 139766.7177 155455.5945 119139.827 142707.5732 123808.9034 135508.3256 136261.0708 135230.9569 147069.2736 1.073784451 0.950346148 1.05702293 0.810093258 0.970342545 0.841840722 0.92139114 0.926509443 0.919505167 1 17.16613634 -5.739312354 24.99999904 0.909547079 1.019380694 0.429821107 0.060018925 218.7174304 247113.7589 0.015019972 0.025989227 1.82E-06 5.739312354 0.109833615 GADNDGSGSESGYTT(ph)PKK ddPTM_A459_MK2206_30min_R1 2 GADNDGSGSESGYTTPKK 18 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGSGS(0.002)ES(0.007)GYT(0.263)T(0.728)PKK;GADNDGS(0.013)GS(0.004)ES(0.008)GY(0.002)T(0.243)T(0.73)PKK 72.317 0.025005 11642200 4235 3788.6 4044.4 3501.8 3082 3307.9 3025.1 3272.1 3180.5 3119.9 TRUE FALSE 3874.791011 3541.961451 3769.877396 3771.509243 2959.237414 3495.190439 2823.301099 3243.492375 3511.124357 3506.416766 1.105057177 1.01013704 1.075136713 1.075602102 0.84394914 0.996798348 0.805181268 0.925016218 1.001342564 1 11.77578177 -6.243636769 24.66582051 0.922192922 1.063076648 0.515241781 0.065248502 548.2844311 759657.198 0.018643927 0.02401356 5.71E-07 6.243636769 0.140883726 GADNDGSGSESGYTT(ph)PKK ddPTM_A459_MK2206_30min_R2 1 GADNDGSGSESGYTTPKK 18 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGS(0.019)GS(0.143)ES(0.273)GYT(0.047)T(0.519)PKK 74 0.020932 10285000 15672 14914 15330 13728 13992 8126.9 15462 10058 11581 12819 TRUE FALSE 16871.86037 14173.39245 15841.09455 12606.37849 13442.60378 8436.174874 13431.82083 11372.61513 12588.29445 12400.71708 1.360555221 1.142949424 1.277433752 1.016584638 1.084018262 0.680297342 1.08314872 0.917093347 1.015126332 1 13.59813593 -5.908384451 1.761604021 0.947337545 1.261578427 0.548693083 0.11973153 0.264777582 1.67098715 0.03738774 0.067134158 1.23E-06 5.908384451 0.314240882 GADS(ph)GEEKEEGINR ddPTM_A459_MK2206_30min_R1 3 GADSGEEKEEGINR 14 1 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR 231.13 1.05E-12 263050000 9812.8 11711.5 10176.1 9103 8091.4 8284.1 10785.7 9625.5 12390.8 14432.8 TRUE FALSE 8978.169831 10949.07922 9485.374684 9804.114637 7769.102404 8753.138583 10066.20563 9541.345268 13678.868 16220.84423 0.553495842 0.675000578 0.584764551 0.604414573 0.478957957 0.539622874 0.62057224 0.588215085 0.843289524 1 13.98556129 -8.418800095 2.389058437 0.999205518 0.578361814 0.89006324 0.049429182 0.085881413 1.008545803 0.0499718 0.013788403 3.81E-09 8.418800095 -0.420843704 GADS(ph)GEEKEEGINR ddPTM_A459_MK2206_30min_R2 3 GADSGEEKEEGINR 14 1 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR 227.74 1.76E-12 192402000 164182 145900 160586 132723 131291 94035 155957 135336 99057 162466 TRUE FALSE 176751.9002 138654.8182 165939.8571 121879.1063 126135.8557 97613.56782 135479.6586 153024.8799 107672.7988 157164.7477 1.124628154 0.882225945 1.055833827 0.775486285 0.802570917 0.62109073 0.862023199 0.973659056 0.685095102 1 17.26191813 -5.764106335 24.99989661 0.809129976 1.00702899 0.364847022 0.12247633 75.29573668 705829.1726 0.03355041 0.052435864 1.72E-06 5.764106335 0.197899014 GADS(ph)GEEKEEGINREDK ddPTM_A459_MK2206_30min_R1 1 GADSGEEKEEGINREDK 17 2 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 GADS(1)GEEKEEGINREDK 73.448 0.028365 91245000 5585 7181.5 7666.7 6001.4 2995.2 3873.2 4489.6 4808.4 6240.3 6786.6 TRUE FALSE 5109.966422 6713.983045 7146.305765 6463.628868 2875.894842 4092.497237 4190.106976 4766.360666 6889.001516 7627.375244 0.669950836 0.880248163 0.936928568 0.847425053 0.377049083 0.536553809 0.549351099 0.624901819 0.903194257 1 12.89697096 GADS(ph)GEEKEEGINREDK ddPTM_A459_MK2206_30min_R2 1 GADSGEEKEEGINREDK 17 2 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 GADS(1)GEEKEEGINREDK 83.423 0.015023 65071000 163240 129190 133450 108450 108000 69515 168550 129250 107330 164780 TRUE FALSE 175737.7799 122774.6125 137899.1564 99589.28809 103759.3773 72160.44204 146419.1825 146143.4188 116665.3694 159403.2421 1.102473059 0.770214024 0.865096309 0.624763253 0.650923883 0.452691182 0.918545825 0.916815849 0.73188831 1 17.28232145 -9.94277187 13.87561766 0.999999424 0.773507767 0.123828467 0.17320448 0 0 0.174832657 0.042403148 1.14E-10 9.94277187 -0.226491657 GADTAPTLAPEALPS(ph)QGEVER ddPTM_A459_MK2206_30min_R1 2 GADTAPTLAPEALPSQGEVER 21 0 Q8IZL8;C9JFV4 Q8IZL8 PELP1 "Proline-, glutamic acid- and leucine-rich protein 1" 1 GADTAPTLAPEALPS(1)QGEVER;GADTAPTLAPEALPS(1)QGEVER 261.94 1.05E-48 6173000 1178.26 989.41 1139.66 585.99 981 1119.25 1267.88 999.14 1087.74 1197.98 TRUE FALSE 1078.0428 924.9992292 1062.303054 631.1230513 941.9246927 1182.620968 1183.302039 990.4046243 1200.814466 1346.394807 0.800688471 0.687019309 0.788998182 0.468750361 0.69959026 0.878361207 0.878867055 0.735597478 0.891873958 1 10.3948858 -6.732160621 6.933136078 0.860655076 0.681404106 0.445563506 0.1039104 0.184987267 29.49798114 0.035066273 0.034330744 1.85E-07 6.732160621 -0.17925097 GADTAPTLAPEALPS(ph)QGEVER ddPTM_A459_MK2206_30min_R2 1 GADTAPTLAPEALPSQGEVER 21 0 Q8IZL8;C9JFV4 Q8IZL8 PELP1 "Proline-, glutamic acid- and leucine-rich protein 1" 1 GADTAPTLAPEALPS(1)QGEVER 151.58 1.41E-06 3404500 14917 14057 14962 14680 15142 20608 15718 12064 10447 13146 TRUE FALSE 16059.05699 13358.94982 15460.82561 13480.59704 14547.449 21392.25188 13654.20772 13640.80622 11355.66118 12717.0471 1.262797634 1.050475768 1.215755945 1.06004145 1.143932934 1.682171318 1.073693257 1.072639436 0.892947953 1 13.63447609 -7.508916377 24.85763089 1.004309382 1.227983149 0.303368052 0.170738134 872.0224174 1552496.343 0.077426937 0.049815569 3.10E-08 7.508916377 0.223673767 GAEAFGDS(ph)EEDGEDVFEVEK ddPTM_A459_MK2206_30min_R1 2 GAEAFGDSEEDGEDVFEVEK 20 0 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GAEAFGDS(1)EEDGEDVFEVEK;GAEAFGDS(1)EEDGEDVFEVEK 107.56 0.00029442 2122900 1464.48 1497.59 1510.72 1354.78 1258.5 1210.41 1387.97 1433.09 1210 1134.21 TRUE FALSE 1339.918286 1400.096619 1408.176536 1459.12539 1208.37128 1278.942368 1295.381054 1420.560645 1335.78383 1274.724498 1.051143434 1.098352327 1.104690887 1.144659409 0.947947013 1.003308849 1.016204722 1.114406013 1.047900023 1 10.31596976 -6.244413346 24.99661154 1.026160966 1.099970095 0.419365851 0.044820784 956.7434881 1404634.143 0.014339623 0.018460532 5.70E-07 6.244413346 0.07380913 GAEEEEEEEDDDS(ph)GEEMK ddPTM_A459_MK2206_30min_R2 1 GAEEEEEEEDDDSGEEMK 18 0 Q08495;Q08495-2;Q08495-3;Q08495-4;E5RFK4 Q08495 DMTN Dematin 1 GAEEEEEEEDDDS(1)GEEMK 238.81 2.33E-65 0 11865 10476 11652 10319 8446 7083.1 9018.4 7194.7 10066 13175 TRUE FALSE 12773.39352 9955.777074 12040.47186 9475.904691 8114.367602 7352.652334 7834.273247 8135.071993 10941.52248 12745.10083 1.002219888 0.781145415 0.944713739 0.743493898 0.636665626 0.576900288 0.614688997 0.638290124 0.858488499 1 13.63765517 -5.89046822 4.80475998 0.690227891 0.89548096 0.272857702 0.132545956 0.242515111 9.199131832 0.036602806 0.0555834 1.29E-06 5.89046822 0.205253069 GAEEMETVIPVDVMR ddPTM_A459_MK2206_30min_R1 1 GAEEMETVIPVDVMR 15 0 Q99497;K7ELW0 Q99497 PARK7 Protein deglycase DJ-1 0 196.67 0.0004259 3113600 1035.4 1143.6 1192.6 1144.8 918.08 927.53 1117.7 1115.2 921.8 910.84 FALSE TRUE 947.3337929 1069.151432 1111.649635 1232.972694 881.5109295 980.045947 1043.140272 1105.449924 1017.624409 1023.681736 0.925418282 1.044417806 1.08593286 1.204449246 0.861118157 0.957373677 1.019008385 1.079876572 0.994082803 1 9.999551533 -4.756297239 24.22834911 1.029579298 0.925418037 0.114006441 0.085055694 263.2453026 1240129.235 0.022214384 0.179090498 1.75E-05 4.756297239 -0.104161261 GAEETSWS(ph)GEER ddPTM_A459_MK2206_30min_R1 2 GAEETSWSGEER 12 0 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 GAEET(0.001)S(0.01)WS(0.989)GEER;GAEETSWS(1)GEER 190.35 0.00013569 95517000 3483.3 3458.6 3189.9 3100.9 4000.6 3272.1 3849.4 3534 3367.4 2604.38 TRUE FALSE 3187.027043 3233.444511 2973.378476 3339.731855 3841.247631 3457.363474 3592.61355 3503.102611 3717.45328 2927.030256 1.088826136 1.104684348 1.015834554 1.140996697 1.312336154 1.181184741 1.22739201 1.196811206 1.270042656 1 11.51522194 -6.000598775 23.72239938 1.210091868 1.074129178 0.333887187 0.080028594 11.37455209 450741.3132 0.020968517 0.030644466 9.99E-07 6.000598775 -0.13596269 GAEETSWS(ph)GEER ddPTM_A459_MK2206_30min_R2 2 GAEETSWSGEER 12 0 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 GAEETS(0.006)WS(0.994)GEER;GAEET(0.001)S(0.006)WS(0.993)GEER 164.13 0.00050729 195127000 35319 41997 34919 50396 38425 43097 47638 39007 37658 45679 TRUE FALSE 38023.0498 39911.49005 36083.18203 46278.48559 36916.24143 44737.08653 41383.07338 44105.34883 40933.42477 44188.49797 0.860473914 0.903209928 0.816574079 1.047297096 0.835426483 1.012414737 0.936512334 0.998118308 0.926336641 1 15.43138327 -5.513296746 0.499847985 0.976120329 0.825519404 0.262478903 0.065050574 3.197060274 1.031738323 0.044099146 0.261882725 3.07E-06 5.513296746 -0.150600925 GAES(ph)ENEEESPR ddPTM_A459_MK2206_30min_R2 2 GAESENEEESPR 12 0 Q9UEG4 Q9UEG4 ZNF629 Zinc finger protein 629 1 GAES(1)ENEEESPR;GAES(0.982)ENEEES(0.018)PR 103.3 0.010825 7767500 90444 62731 70361 68758 58342 58913 61952 51113 47381 81341 TRUE FALSE 97368.46218 59615.86976 72706.80062 63140.25145 56051.19993 61154.9755 53817.62798 57793.6446 51502.11373 78686.84983 1.23741721 0.75763447 0.924001924 0.802424441 0.712332493 0.777194355 0.683946912 0.734476532 0.654519959 1 16.26383493 -2.535168673 1.323830667 0.762933541 200 0.612420457 0.1055747 392.8122205 2.14817149 0.029313076 236139.4382 0.002916294 2.535168673 199.2370664 GAES(ph)PFEEK ddPTM_A459_MK2206_30min_R1 9 GAESPFEEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK 163.9 0.00096556 6020399700 86968.5 106308.9 96366.2 88040.8 77221.2 69768.4 81353.7 80675.3 78494.4 73102.3 TRUE FALSE 79571.37239 99388.17129 89825.13084 94821.71767 74145.31609 73718.62652 75926.74311 79969.96436 86654.17377 82158.76482 0.968507408 1.209708684 1.093311603 1.154127839 0.902463861 0.897270385 0.924146599 0.973358893 1.054716121 1 16.32612687 -6.259531136 24.99990215 0.952532171 1.11285621 0.500996354 0.071970323 135.8443 1779692.966 0.021563495 0.026432254 5.50E-07 6.259531136 0.160324039 GAES(ph)PFEEK ddPTM_A459_MK2206_30min_R2 14 GAESPFEEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK 177.44 0.00060158 6813526100 1728328.7 2058891 1790295.1 1757527 1813019.6 1379646.6 2080642 1552662.5 1550226.5 1836202 TRUE FALSE 1860650.874 1956649.467 1849982.645 1613931.422 1741831.341 1432150.018 1807451.206 1755600.82 1685062.399 1776286.879 1.047494578 1.101539109 1.041488662 0.908598403 0.980602492 0.80626054 1.017544647 0.988354325 0.94864316 1 20.76043317 -5.622009943 5.15401335 0.947960002 1.073861379 0.45227072 0.057845528 0.176587757 7.441093409 0.015860856 0.028085105 2.39E-06 5.622009943 0.125901377 GAGAELKDTQS(ph)PSTCSEGLLGWSQK ddPTM_A459_MK2206_30min_R2 1 GAGAELKDTQSPSTCSEGLLGWSQK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GAGAELKDT(0.158)QS(0.829)PS(0.009)T(0.003)CS(0.001)EGLLGWSQK 89.462 3.17E-05 7070500 25185 37515 35936 36511 41196 27746 39024 29693 28320 35155 TRUE FALSE 27113.18296 35652.05965 37134.0883 33527.93451 39578.43805 28801.89347 33900.10192 33573.97705 30783.22241 34007.89523 0.797261424 1.04834655 1.091925509 0.985886785 1.163801458 0.846917849 0.996830345 0.987240664 0.9051787 1 15.0535821 -6.78294361 24.99995917 0.94953593 1.021545902 0.112668454 0.098074683 558.6241058 649429.3753 0.034095845 0.030094603 1.65E-07 6.78294361 0.072009972 GAGATS(ph)GSPPAGRN ddPTM_A459_MK2206_30min_R1 1 GAGATSGSPPAGRN 14 1 B4DEE8;P16455 B4DEE8 MGMT Methylated-DNA--protein-cysteine methyltransferase 1 GAGAT(0.237)S(0.527)GS(0.237)PPAGRN 91.307 0.030786 10918000 1203.8 1172.9 1241.6 1048.6 1400 1015.7 1345.9 1233.3 839.27 531.47 TRUE FALSE 1101.410489 1096.543997 1157.323651 1129.363354 1344.235035 1073.208056 1256.117467 1222.517388 926.5151199 597.312516 1.843943428 1.835796116 1.937551316 1.89074115 2.250471905 1.79672789 2.102948512 2.04669642 1.551139638 1 9.222342142 -8.55644668 3.048569139 1.001769285 1.962815766 0.836323808 0.133035987 0.096262544 2.324766748 0.128801775 0.034296016 2.78E-09 8.55644668 0.961046481 GAGATS(ph)GSPPAGRN ddPTM_A459_MK2206_30min_R2 2 GAGATSGSPPAGRN 14 1 B4DEE8;P16455 B4DEE8 MGMT Methylated-DNA--protein-cysteine methyltransferase 1 GAGAT(0.126)S(0.647)GS(0.227)PPAGRN;GAGAT(0.135)S(0.73)GS(0.135)PPAGRN 86.756 0.041169 41339000 5957.2 12321.1 9358.1 10292.7 10335.5 13997.7 9900.9 8088 10883.3 10473.6 TRUE FALSE 6413.287812 11709.25209 9670.094383 9451.753485 9929.676338 14530.39228 8600.899937 9145.12937 11829.90976 10131.84729 0.632983071 1.155687779 0.954425596 0.932875636 0.980045993 1.434130605 0.84889751 0.902612239 1.167596532 1 13.30660962 -4.750909113 24.98710969 1.036931349 0.632982223 0.362137764 0.162658167 516.3817614 1225233.018 0.04058819 0.567605068 1.77E-05 4.750909113 -0.403949127 GAGATSGS(ph)PPAGR ddPTM_A459_MK2206_30min_R1 2 GAGATSGSPPAGR 13 0 B4DEE8;P16455 B4DEE8 MGMT Methylated-DNA--protein-cysteine methyltransferase 1 GAGAT(0.002)S(0.016)GS(0.983)PPAGR;GAGAT(0.004)S(0.023)GS(0.973)PPAGR 150.14 0.00050046 15988900 3407.4 3386.3 2916.2 2507.5 3072.5 2943.8 3431.4 2861.8 3085.7 4020.5 TRUE FALSE 3117.582737 3165.851255 2718.256469 2700.628084 2950.115819 3110.475412 3202.497567 2836.779584 3406.469557 4518.589893 0.689945937 0.700628145 0.601571847 0.597670545 0.652884172 0.688373029 0.708738266 0.627801958 0.753878895 1 12.14165691 -8.660747117 2.929988418 0.999928657 0.65871277 0.88126937 0.037865691 0.195392055 3.304721779 0.039873063 0.010628255 2.18E-09 8.660747117 -0.341215887 GAGDGS(ph)DEEVDGK ddPTM_A459_MK2206_30min_R1 4 GAGDGSDEEVDGK 13 0 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 1 GAGDGS(1)DEEVDGK;GAGDGS(1)DEEVDGK;GAGDGS(1)DEEVDGK;GAGDGS(1)DEEVDGK 193.45 0.00010376 74381500 13460.4 13105.4 14022.8 10444.3 9658.1 10623.9 15143.9 10649.3 14896.5 19573.5 TRUE FALSE 12315.5223 12252.23608 13070.97141 11248.7218 9273.397426 11225.41604 14133.67806 10556.19429 16445.04448 21998.41295 0.559836854 0.55696 0.594177927 0.511342424 0.421548475 0.510282995 0.64248626 0.47986163 0.74755595 1 14.42511183 -8.542842568 3.027559768 0.999421841 0.535847782 0.861785765 0.058688959 0.087061175 2.051391814 0.059237779 0.015787898 2.87E-09 8.542842568 -0.463574059 GAGDGS(ph)DEEVDGK ddPTM_A459_MK2206_30min_R2 3 GAGDGSDEEVDGK 13 0 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 1 GAGDGS(1)DEEVDGK;GAGDGS(1)DEEVDGK;GAGDGS(1)DEEVDGK 158.31 0.00036465 331690000 214366 165145 161798 131422 134023 121702 179825 130479 111431 152068 TRUE FALSE 230778.0258 156944.1394 167192.2646 120684.4022 128760.5836 126333.4549 156213.7615 147533.0533 121123.067 147106.0336 1.56878695 1.06687765 1.136542536 0.820390566 0.875290975 0.858791797 1.061912674 1.002902802 0.823372529 1 17.16649689 -3.241361099 1.008704671 0.92962415 14.08038533 0.794122545 0.095695398 15.76013323 0.973218847 0.030867433 424.4569648 0.000573639 3.241361099 13.15076118 GAGDGS(ph)DEEVDGKADGAEAK ddPTM_A459_MK2206_30min_R2 1 GAGDGSDEEVDGKADGAEAK 20 1 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 1 GAGDGS(1)DEEVDGKADGAEAK 63.894 0.010379 7142800 28920 24112 23743 30159 21337 27304 23319 18041 22620 27943 TRUE FALSE 31134.13744 22914.63314 24534.57977 27694.91323 20499.20217 28343.07285 20257.18729 20399.02064 24587.44671 27031.2222 1.151784304 0.847709844 0.907638567 1.024552757 0.758352768 1.048530941 0.749399607 0.754646627 0.90959434 1 14.72233912 -4.756904038 24.99458305 0.882637418 1.151784707 0.352449265 0.106577163 151.2709094 833561.2186 0.025908816 0.201522013 1.75E-05 4.756904038 0.26914729 GAGDGS(ph)DEEVDGKADGAEAKPAE ddPTM_A459_MK2206_30min_R1 5 GAGDGSDEEVDGKADGAEAKPAE 23 2 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 1 GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE 78.707 0.00077468 407934600 12996.1 14123.9 14052.6 12149.6 10058.18 9083.62 11457.08 12302.5 12211.79 10092.5 TRUE FALSE 11890.71345 13204.43154 13098.74866 13085.3643 9657.541392 9597.926714 10692.7991 12194.94054 13481.24927 11342.83509 1.048301712 1.164120913 1.154803764 1.15362378 0.851422181 0.846166468 0.942691929 1.075122792 1.188525546 1 13.46949366 -6.231497356 24.87219806 0.978788382 1.134391112 0.342845583 0.098952228 816.336282 678112.9311 0.03252381 0.041982009 5.87E-07 6.231497356 0.15560273 GAGDGS(ph)DEEVDGKADGAEAKPAE ddPTM_A459_MK2206_30min_R2 4 GAGDGSDEEVDGKADGAEAKPAE 23 2 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 1 GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE 74.287 0.0011209 424387000 130894 165346 163350 144295 159891 99950 157388 121726 123755.7 142690 TRUE FALSE 140915.3453 157135.1581 168796.0075 132505.6369 153612.876 103753.6673 136722.7665 137636.0061 134519.7471 138034.037 1.020873897 1.13837979 1.222857863 0.959949008 1.112862301 0.751652777 0.990500383 0.99711643 0.974540411 1 17.07466453 -6.137360546 1.900330192 0.953961294 1.120710718 0.307328526 0.099583434 0.39456472 2.81485302 0.033152103 0.047809358 7.29E-07 6.137360546 0.166749424 GAGGPAS(ph)AQGSVK ddPTM_A459_MK2206_30min_R2 2 GAGGPASAQGSVK 13 0 Q9UHV7 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 1 GAGGPAS(0.999)AQGS(0.001)VK;GAGGPAS(1)AQGSVK 145.61 0.00062246 10522000 69468 84492 73484 73510 73738 67685 87147 65945 60724 72931 TRUE FALSE 74786.52349 80296.25014 75933.91988 67503.99785 70842.67562 70260.8001 75704.49422 74564.23792 66005.66376 70551.26744 1.0600309 1.13812626 1.076294199 0.956807727 1.004130446 0.99588289 1.073042299 1.056880204 0.935570205 1 16.10638438 -5.586625695 7.113682121 1.008432567 1.101115821 0.480956421 0.042204742 0.181461872 16.56509615 0.011674132 0.020382999 2.59E-06 5.586625695 0.092683253 GAGGS(ph)PVGVEEGLVNVGTGQK ddPTM_A459_MK2206_30min_R1 3 GAGGSPVGVEEGLVNVGTGQK 21 0 Q7Z5J4-3;Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 GAGGS(1)PVGVEEGLVNVGTGQK;GAGGS(1)PVGVEEGLVNVGTGQK;GAGGS(1)PVGVEEGLVNVGTGQK 343.25 3.51E-175 47940400 11308.3 11721.5 10522.3 8642.2 10873.7 10307.9 11139.4 9445.9 10345.2 9541.7 TRUE FALSE 10346.4697 10958.42822 9808.075593 9307.823741 10440.5775 10891.52439 10396.31095 9363.315492 11420.62056 10723.79783 0.964813946 1.021879412 0.914608401 0.867959643 0.97358955 1.015640593 0.96946167 0.873134279 1.0649791 1 13.38852831 -6.488428565 24.87537819 0.977859654 0.942863831 0.101492096 0.058034127 1735.80844 1253373.593 0.018648415 0.021133636 3.25E-07 6.488428565 -0.034995823 GAGGS(ph)PVGVEEGLVNVGTGQK ddPTM_A459_MK2206_30min_R2 3 GAGGSPVGVEEGLVNVGTGQK 21 0 Q7Z5J4-3;Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 GAGGS(1)PVGVEEGLVNVGTGQK;GAGGS(1)PVGVEEGLVNVGTGQK;GAGGS(1)PVGVEEGLVNVGTGQK 251.41 4.79E-39 54129300 76488 100095 90030 100446 90361 89564 100151 82242 79182 91086 TRUE FALSE 82343.98009 95124.42785 93031.55527 92239.24049 86812.97311 92972.42078 87001.0534 92991.31178 86069.10723 88113.87128 0.934517788 1.079562462 1.055810554 1.046818613 0.985236171 1.05513944 0.987370684 1.055353833 0.976794073 1 16.42708153 -8.277799808 24.72229298 0.988397033 1.026978886 0.106361563 0.042092332 1726.808807 2609358.586 0.037867243 0.009920919 5.27E-09 8.277799808 0.038581854 GAGPQLLEELDNAPGSDAAELELAPART(ph)PPDSVKDASAAEPAAAER ddPTM_A459_MK2206_30min_R1 1 GAGPQLLEELDNAPGSDAAELELAPARTPPDSVKDASAAEPAAAER 46 2 Q9UHR6 Q9UHR6 ZNHIT2 Zinc finger HIT domain-containing protein 2 1 GAGPQLLEELDNAPGS(0.199)DAAELELAPART(0.789)PPDS(0.01)VKDAS(0.002)AAEPAAAER 63.021 1.96E-06 4065300 1382.1 1301.6 1436.8 1250.5 1679 1265.6 1130 1467.6 767.92 296.4 TRUE FALSE 1264.545137 1216.865603 1339.274019 1346.813727 1612.121875 1337.257178 1054.619762 1454.768928 847.748032 333.1202697 3.79606182 3.652931731 4.020391855 4.043025445 4.839458962 4.014337463 3.165882889 4.367098193 2.544870754 1 8.379899332 -8.527925002 3.088033056 1.004309855 3.979206696 0.836765111 0.418734024 0.089881283 2.175876169 0.419514211 0.111686814 2.97E-09 8.527925002 2.97489684 GAGQQQS(ph)QEMMEVDR ddPTM_A459_MK2206_30min_R2 2 GAGQQQSQEMMEVDR 15 0 B5MBZ8;Q15435-3;Q15435;C9JRC4 B5MBZ8 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 GAGQQQS(1)QEMMEVDR;GAGQQQS(1)QEMMEVDR 210.09 1.26E-06 17717700 45588 50804 40469 39125 41282 39356 54674 37626 34328 48473 TRUE FALSE 49078.25233 48281.14724 41818.21626 35928.36235 39661.06125 40853.72016 47495.23812 42543.84739 37313.78739 46891.32998 1.046638096 1.029639109 0.891811264 0.766204805 0.845807984 0.871242513 1.012878887 0.907286004 0.795750246 1 15.51703358 -5.259545658 5.053813919 0.880766131 1.040978593 0.404794047 0.073558077 0.168145251 13.93533504 0.020065305 0.049678924 5.50E-06 5.259545658 0.160212462 GAGSIAGASAS(ph)PK ddPTM_A459_MK2206_30min_R1 2 GAGSIAGASASPK 13 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 GAGS(0.001)IAGAS(0.027)AS(0.972)PK;GAGS(0.013)IAGAS(0.044)AS(0.944)PK 86.262 0.026704 5787100 7579.4 8219.7 8170.7 6643.2 6420.7 6147.9 6785.4 6377.6 9683.4 10296.6 TRUE FALSE 6934.732229 7684.596036 7616.095649 7154.860415 6164.949923 6495.988785 6332.758347 6321.841316 10690.02408 11572.22054 0.599256833 0.664055443 0.658136061 0.618278954 0.532736989 0.561343327 0.547237959 0.546294576 0.923766017 1 13.4983781 -8.3325354 4.599037153 0.987913079 0.592017325 0.915327429 0.045260628 0.064987657 2.519734374 0.049354601 0.013144355 4.65E-09 8.3325354 -0.395895754 GAGTDDHTLIR ddPTM_A459_MK2206_30min_R2 1 GAGTDDHTLIR 11 0 P08758;D6RBE9;D6RBL5 P08758 ANXA5 Annexin A5;Annexin 0 208.15 2.54E-05 8312000 77590 87856 77194 105030 93191 93598 93512 83114 82374 90046 FALSE TRUE 83530.35006 83493.19879 79767.60943 96448.71303 89531.85309 97159.93748 81233.76207 93977.28517 89538.74162 87107.80639 0.958930703 0.958504206 0.915734338 1.107233864 1.027828122 1.11539874 0.932565811 1.078861804 1.027907203 1 16.4105144 -5.748498838 24.99999812 1.042668384 0.945801181 0.428013552 0.051368715 213.6598415 412768.6181 0.013378198 0.022982637 1.78E-06 5.748498838 -0.096867203 GAGTDEGCLIEILASR ddPTM_A459_MK2206_30min_R1 2 GAGTDEGCLIEILASR 16 0 P09525;P09525-2 P09525 ANXA4 Annexin A4 0 ; 277.11 2.96E-61 4085700 1099.46 1583.05 1172.61 1489.01 1410.14 1264.29 1330.53 1146.19 893.26 963.23 FALSE TRUE 1005.945154 1479.993157 1093.0165 1603.693808 1353.971138 1335.873007 1241.772771 1136.168982 986.1175736 1082.562204 0.929226191 1.367120662 1.009656993 1.481387214 1.250709781 1.233991915 1.147068285 1.049518427 0.910910772 1 10.08023421 -7.782505716 2.056441325 0.957810014 1.222973061 0.317091598 0.150327206 0.374288138 3.092834376 0.102866946 0.04182461 1.65E-08 7.782505716 0.265163046 GAGTDEGCLIEILASR ddPTM_A459_MK2206_30min_R2 2 GAGTDEGCLIEILASR 16 0 P09525;P09525-2 P09525 ANXA4 Annexin A4 0 ; 202.61 6.33E-06 6101100 12946.1 14881.5 12167.3 19475.2 12989.1 19000.4 15402.1 11808.5 14122.5 15754.4 FALSE TRUE 13937.26337 14142.50635 12572.95171 17884.01386 12479.08267 19723.47354 13379.78577 13351.91149 15350.84952 15240.33522 0.914498479 0.927965569 0.824978685 1.173465912 0.818819435 1.294162711 0.877919388 0.876090408 1.007251435 1 13.89560702 GAILSEEELAAMS(ph)PTAAAVAK ddPTM_A459_MK2206_30min_R1 4 GAILSEEELAAMSPTAAAVAK 21 0 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 GAILSEEELAAMS(0.931)PT(0.069)AAAVAK;GAILSEEELAAMS(0.997)PT(0.003)AAAVAK;GAILSEEELAAMS(0.853)PT(0.147)AAAVAK;GAILSEEELAAMS(0.877)PT(0.123)AAAVAK 372.7 4.72E-242 33920000 17883.68 16472.6 16342.04 14274.64 16143.74 14728.18 16699.97 15704.59 14710.67 15036.62 TRUE FALSE 16362.57911 15400.23075 15232.78786 15374.07525 15500.70065 15562.07682 15585.94547 15567.28643 16239.89679 16899.47001 0.968230311 0.911284836 0.901376662 0.909737124 0.917229987 0.920861827 0.922274217 0.921170097 0.960970775 1 14.04469038 -8.50074784 2.173264987 0.999867689 0.919526736 0.684233491 0.017021334 0.170029632 1.82926572 0.016299284 0.004514801 3.16E-09 8.50074784 -0.080340953 GAILSEEELAAMS(ph)PTAAAVAK ddPTM_A459_MK2206_30min_R2 8 GAILSEEELAAMSPTAAAVAK 21 0 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 GAILS(0.002)EEELAAMS(0.859)PT(0.14)AAAVAK;GAILS(0.041)EEELAAMS(0.791)PT(0.168)AAAVAK;GAILSEEELAAMS(0.938)PT(0.062)AAAVAK;GAILSEEELAAMS(0.945)PT(0.055)AAAVAK;GAILSEEELAAMS(0.997)PT(0.003)AAAVAK;GAILSEEELAAMS(0.807)PT(0.192)AAAVAK;GAILSEEELAAMS(0.833)PT(0.167)AAAVAK;GAILS(0.002)EEELAAMS(0.862)PT(0.136)AAAVAK 223.18 7.99E-21 52918400 138313 133633.2 131967.2 154727 151266 141869 159420 119376.4 124160.8 143583 TRUE FALSE 148902.3496 126997.1696 136366.9206 142085.3092 145326.5368 147267.9242 138487.9625 134979.3054 134960.082 138897.8985 1.072027376 0.91432031 0.981778141 1.022947868 1.046283194 1.060260276 0.997048652 0.97178796 0.97164956 1 17.08366525 -4.437147651 21.93519761 0.998961202 6.621438814 0.247453011 0.039396311 712.2671109 180174.9496 0.010397028 2263.854406 3.65E-05 4.437147651 5.622477612 GAILSEEELAAMSPT(ph)AAAVAK ddPTM_A459_MK2206_30min_R2 2 GAILSEEELAAMSPTAAAVAK 21 0 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 GAILSEEELAAMS(0.366)PT(0.634)AAAVAK;GAILSEEELAAMS(0.152)PT(0.848)AAAVAK 151.78 1.37E-05 8166900 41980 45475 39327 44085 39061 38904 47757 31729 34247 41034 TRUE FALSE 45194.02108 43216.77763 40638.14255 40483.11448 37527.26887 40384.51898 41486.44853 35876.08924 37225.74216 39695.06394 1.138529998 1.088719184 1.023758083 1.019852608 0.9453888 1.017368785 1.045128649 0.903792202 0.937792724 1 15.276672 -3.080175211 0.454804559 0.964546965 1.95067813 0.65834168 0.039218595 13.60917995 0.634879304 0.026296202 10.05791078 0.000831428 3.080175211 0.986131165 GAKEEHGGLIRS(ph)PR ddPTM_A459_MK2206_30min_R1 3 GAKEEHGGLIRSPR 14 2 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR 69.352 0.023777 169521000 25242.9 25063.6 26873 29101.3 33972.5 25479.4 21752.3 30460.1 12371.9 6667.6 TRUE FALSE 23095.8588 23431.95508 25048.93563 31342.68717 32619.30339 26922.02161 20301.24376 30193.79056 13658.00328 7493.632626 3.082064461 3.126915377 3.342695977 4.182575893 4.352936021 3.592652983 2.709132509 4.029259515 1.822614473 1 12.87144954 -8.425517398 3.821996365 1.019464387 3.549143736 0.753857973 0.498519718 0.10871173 2.752598408 0.515819069 0.135958913 3.75E-09 8.425517398 2.529679349 GAKLT(ph)PEEEEILNK ddPTM_A459_MK2206_30min_R1 2 GAKLTPEEEEILNK 14 1 P62241;Q5JR95 P62241 RPS8 40S ribosomal protein S8 1 GAKLT(1)PEEEEILNK;GAKLT(1)PEEEEILNK 122.5 0.0024427 14975700 11250.3 13031.6 12718.2 10860.2 9711.6 8467.4 10369 10927.2 11956.4 10920.1 TRUE FALSE 10293.40291 12183.24047 11854.92402 11696.65449 9324.766407 8946.816871 9677.302929 10831.66464 13199.31057 12272.96443 0.838705511 0.9926893 0.965938106 0.953042319 0.759781099 0.728985806 0.788505742 0.882563027 1.075478597 1 13.58319614 -8.206958378 6.296869518 1.037292576 0.86333047 0.398025841 0.085670978 0.233977282 20.94848325 0.069867644 0.025330177 6.21E-09 8.206958378 -0.173962106 GAKLT(ph)PEEEEILNK ddPTM_A459_MK2206_30min_R2 1 GAKLTPEEEEILNK 14 1 P62241;Q5JR95 P62241 RPS8 40S ribosomal protein S8 1 GAKLT(1)PEEEEILNK 85.362 0.034187 16447000 30704 37059 33889 34359 32133 26197 33858 26247 25196 31724 TRUE FALSE 33054.72185 35218.70395 35018.84235 31551.75979 30871.29696 27193.94519 29412.40393 29677.57302 27387.50254 30688.84848 1.077092282 1.147605912 1.141093397 1.028118074 1.005945107 0.886118135 0.958406893 0.967047462 0.892425226 1 14.90542689 -6.123699233 1.840327114 0.941790399 1.124557866 0.784081719 0.040172542 0.145721547 0.977519677 0.013150497 0.019302001 7.52E-07 6.123699233 0.182767467 GALEAFAAALRR ddPTM_A459_MK2206_30min_R2 1 GALEAFAAALRR 12 1 Q17RB8-2;Q17RB8 Q17RB8-2 LONRF1 LON peptidase N-terminal domain and RING finger protein 1 0 67.726 0.048196 1140300 6490.8 4112 5026.7 3153.5 6011.1 4181 4274.5 9852.9 11367 6566.9 FALSE TRUE 6987.740639 3907.804059 5194.287669 2895.848962 5775.074011 4340.110885 3713.253015 11140.70786 12355.68111 6352.622591 1.099977299 0.615148154 0.817660359 0.455850937 0.909085016 0.683199863 0.584522843 1.753717886 1.944973267 1 12.6331366 -7.762537609 24.99985684 1.637009379 0.729895251 0.639755004 0.283301479 15.84893872 360748.2818 0.136287726 0.071286979 1.73E-08 7.762537609 -0.907114128 GALGLGS(ph)CHFTGK ddPTM_A459_MK2206_30min_R2 1 GALGLGSCHFTGK 13 0 Q8NCL4 Q8NCL4 GALNT6 Polypeptide N-acetylgalactosaminyltransferase 6 1 GALGLGS(0.971)CHFT(0.029)GK 77.597 0.042793 4525900 9253.9 28425 15321 50319 42493 60645 26002 27107 40233 15583 TRUE FALSE 9962.385699 27013.45583 15831.79449 46207.77674 40824.51131 62952.88797 22587.90617 30649.97797 43732.39362 15074.52799 0.660875465 1.791993478 1.05023484 3.065288464 2.708178415 4.17611006 1.498415485 2.033229697 2.901078804 1 13.87982521 -5.752906986 24.90787486 2.5651182 1.230130122 0.322202888 0.867252057 210.1711497 613527.5917 0.234887921 0.39860423 1.77E-06 5.752906986 -1.334988078 GALHT(ph)VSHEDIR ddPTM_A459_MK2206_30min_R1 1 GALHTVSHEDIR 12 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 GALHT(0.592)VS(0.408)HEDIR 122.52 0.0047746 63227000 5526.5 6363.2 5355.8 5335 5820.2 6452.1 6897.2 4511.5 4482.2 4547.3 TRUE FALSE 5056.442154 5948.954523 4992.263218 5745.902624 5588.36911 6817.412326 6437.100373 4472.056431 4948.14073 5110.653854 0.989392414 1.164030023 0.976834542 1.124298923 1.093474391 1.333960883 1.259545365 0.875045847 0.968201109 1 12.31929217 -7.772169302 24.99970097 0.941217586 1.135277252 0.393764935 0.10609487 234.9405678 547380.449 0.061114116 0.029830157 1.69E-08 7.772169302 0.194059665 GALHTVS(ph)HEDIR ddPTM_A459_MK2206_30min_R1 2 GALHTVSHEDIR 12 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 GALHT(0.028)VS(0.972)HEDIR;GALHT(0.048)VS(0.952)HEDIR 106.58 0.0058494 62833100 7479.3 8481 7223.3 6508.2 7782.1 9436.2 8913.8 6976.5 6250.8 6102.6 TRUE FALSE 6843.14626 7928.885359 6733.002521 7009.462692 7472.122478 9970.469489 8319.176666 6915.505196 6900.593029 6858.63616 0.997741548 1.156044026 0.981682417 1.021990747 1.089447275 1.453710221 1.212949116 1.008291595 1.006117378 1 12.74370601 -4.746189303 23.7923319 1.111211546 0.997740989 0.047813428 0.137434702 1673.134133 2610058.433 0.037262938 0.804152457 1.79E-05 4.746189303 -0.113470556 GALHTVS(ph)HEDIR ddPTM_A459_MK2206_30min_R2 4 GALHTVSHEDIR 12 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 GALHT(0.122)VS(0.878)HEDIR;GALHT(0.229)VS(0.771)HEDIR;GALHT(0.022)VS(0.978)HEDIR;GALHT(0.39)VS(0.61)HEDIR 122.1 0.0023983 169556000 358538 464482 399739 508772 413551 520337 509225 402956 381751 372530 TRUE FALSE 385987.9449 441416.4993 413066.0987 467203.7001 397312.9098 540138.7892 442363.1458 455623.7328 414955.0119 360374.3766 1.071074888 1.224883144 1.146213842 1.296439843 1.102500443 1.498826843 1.227509986 1.264306683 1.151455372 1 18.45913691 -4.758358616 6.080868868 1.227589707 1.065239083 0.090798727 0.126304084 0.30188718 43.86933492 0.029921229 0.202960725 1.74E-05 4.758358616 -0.162350624 GALPPS(ph)PALPR ddPTM_A459_MK2206_30min_R1 1 GALPPSPALPR 11 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 GALPPS(1)PALPR 90.434 0.027833 3978800 2528.3 2488.6 2623.3 2140.9 2647.5 2620.1 3454.3 1985.7 2583.7 2928.7 TRUE FALSE 2313.254808 2326.591688 2445.237705 2305.792489 2542.044469 2768.447798 3223.86995 1968.339234 2852.284861 3291.529467 0.702790247 0.706842127 0.742887989 0.700523119 0.772298864 0.841082489 0.979444353 0.598001402 0.866553039 1 11.6845424 -6.552151524 3.230479214 0.839120988 0.715597037 0.296387057 0.102860681 0.375300999 8.123976521 0.035029858 0.036540071 2.80E-07 6.552151524 -0.123523951 GALPPS(ph)PALPR ddPTM_A459_MK2206_30min_R2 1 GALPPSPALPR 11 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 GALPPS(1)PALPR 107.97 0.010242 3603900 20005 19947 16519 24854 16806 15929 19777 15568 17230 21837 TRUE FALSE 21536.59818 18956.46099 17069.73522 22823.3487 16146.112 16535.18926 17180.25614 17602.79105 18728.63426 21124.46048 1.019509975 0.897370184 0.80805544 1.080422798 0.764332515 0.782750843 0.813287334 0.833289497 0.886585211 1 14.36662687 -4.795148543 3.553007841 0.862936918 1.035485353 0.175795792 0.094473607 0.450518234 9.564779675 0.023801101 0.204691388 1.60E-05 4.795148543 0.172548435 GALPPS(ph)PALPRPSR ddPTM_A459_MK2206_30min_R1 1 GALPPSPALPRPSR 14 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 GALPPS(1)PALPRPSR 82.942 0.015843 28563000 1987.2 2273.1 1833.8 1801.9 2146.8 1807.5 1757.7 1839.4 1527.5 1366.9 TRUE FALSE 1818.178205 2125.120777 1709.326765 1940.68265 2061.28841 1909.839088 1640.44704 1823.31832 1686.289091 1536.241892 1.183523386 1.383324324 1.112667722 1.263266326 1.341773338 1.243189044 1.067831211 1.186869288 1.097671597 1 10.58518968 -8.013646714 0.669476153 1.009614497 1.261496657 0.486292736 0.083013954 0.60108472 0.573264007 0.080108649 0.037436391 9.69E-09 8.013646714 0.251882159 GALPPS(ph)PALPRPSR ddPTM_A459_MK2206_30min_R2 6 GALPPSPALPRPSR 14 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 GALPPS(0.998)PALPRPS(0.002)R;GALPPS(1)PALPRPSR;GALPPS(1)PALPRPSR;GALPPS(0.976)PALPRPS(0.024)R;GALPPS(1)PALPRPSR;GALPPS(1)PALPRPSR 110.6 0.0023093 135875000 156928 204719 168136 187152 194057 200323 186634 147452 187406 186583 TRUE FALSE 168942.5283 194552.9521 173741.5703 171861.0829 186437.3471 207946.4321 162128.7316 166724.4827 203706.2351 180494.812 0.935996589 1.077886672 0.962584843 0.952166331 1.032923579 1.15209091 0.898245938 0.923707894 1.128598838 1 17.46159784 -4.398079963 8.112957194 1.009474435 0.179659681 0.075380279 0.080660994 4795.450941 13658.46367 0.020180814 64785.51548 4.00E-05 4.398079963 -0.829814754 GALQNIIPAS(ph)TGAAK ddPTM_A459_MK2206_30min_R1 2 GALQNIIPASTGAAK 15 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 GALQNIIPAS(0.699)T(0.301)GAAK;GALQNIIPAS(0.5)T(0.5)GAAK 228.51 9.13E-14 341370000 11755.4 13518.1 12734.2 10573.7 12115.2 11501.5 12409.8 11187 10804.1 10046.9 TRUE FALSE 10755.5415 12638.06923 11869.83798 11388.08821 11632.62593 12152.70499 11581.96488 11089.19324 11927.22486 11291.58582 0.9525271 1.119246617 1.05121089 1.008546398 1.03020303 1.076262022 1.025716411 0.982075805 1.056293159 1 13.4629605 -7.518768125 24.92619492 1.01228991 1.042715565 0.067414911 0.044173309 429.5193792 2604589.928 0.019571031 0.011647979 3.03E-08 7.518768125 0.030425655 GALQNIIPAST(ph)GAAK ddPTM_A459_MK2206_30min_R2 2 GALQNIIPASTGAAK 15 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 GALQNIIPAS(0.095)T(0.905)GAAK;GALQNIIPAS(0.081)T(0.919)GAAK 260.07 5.33E-36 286360000 1031180 1305620 1261320 1314400 1197330 1052780 1402950 1052680 1042770 1167300 TRUE FALSE 1110127.934 1240784.809 1303371.779 1207009.315 1150316.808 1092844.281 1218740.98 1190268.89 1133468.25 1129211.097 0.983100447 1.09880678 1.154232174 1.068896081 1.01869067 0.967794493 1.079285338 1.054071195 1.003770024 1 20.10688378 -6.170423473 4.828754054 1.023694473 1.084901086 0.235242608 0.048548269 0.336895719 13.21810901 0.015101995 0.019679888 6.75E-07 6.170423473 0.061206613 GALQNIIPASTGAAK ddPTM_A459_MK2206_30min_R1 2 GALQNIIPASTGAAK 15 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 196.11 0.00045002 71898000 6480.6 6080.8 5913.8 6149.2 6048.9 6249 6795.9 5954.5 5256.2 5597.1 FALSE TRUE 5929.390939 5684.938815 5512.387733 6622.812449 5807.959504 6602.81298 6342.557911 5902.440434 5802.600799 6290.511004 0.942592889 0.903732433 0.876302057 1.052825827 0.923288983 1.049646519 1.008273876 0.938308578 0.922437111 1 12.6189615 -5.742168897 24.99997062 0.983494211 0.907161453 0.367035542 0.046565353 273.435037 354729.846 0.012745195 0.022031504 1.81E-06 5.742168897 -0.076332758 GALQNIIPASTGAAK ddPTM_A459_MK2206_30min_R2 1 GALQNIIPASTGAAK 15 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 119.74 0.025935 12329000 52266 58503 60134 59568 56849 51269 67166 53853 56878 64853 FALSE TRUE 56267.52515 55597.82609 62138.83755 54701.10385 54616.82262 53220.07772 58347.02352 60891.772 61825.14563 62736.85192 0.896881552 0.886206821 0.990467893 0.871913432 0.870570023 0.848306475 0.930027914 0.970590174 0.985467771 1 15.93702552 -7.695034905 2.858587405 0.987358161 0.8956749 0.562983629 0.035984059 0.218524471 3.587762852 0.02242954 0.010872845 2.02E-08 7.695034905 -0.091683261 GALSS(ph)SLRDLSDAGVCY ddPTM_A459_MK2206_30min_R1 1 GALSSSLRDLSDAGVCY 17 1 A0A1W2PR28;Q5JU85-3 A0A1W2PR28 IQSEC2 IQ motif and SEC7 domain-containing protein 2 1 GALS(0.007)S(0.894)S(0.099)LRDLSDAGVCY 111.34 0.0096678 9366000 1491.8 1731.7 1811.8 1523.5 1725.4 1302.6 1422.5 1580 1115.1 707.17 TRUE FALSE 1364.914576 1618.966015 1688.820064 1640.840234 1656.673664 1376.352086 1327.60762 1566.186227 1231.018635 794.7795585 1.717349876 2.037000069 2.124891168 2.064522441 2.08444423 1.731740672 1.670409872 1.970591984 1.548880595 1 9.634410957 -9.08871336 0.467041295 0.927529055 2.009892234 0.774172853 0.155649316 1.080540188 0.41421543 0.321012526 0.093715817 8.15E-10 9.08871336 1.082363179 GALSSS(ph)LRDLSDAGVCY ddPTM_A459_MK2206_30min_R1 1 GALSSSLRDLSDAGVCY 17 1 A0A1W2PR28;Q5JU85-3 A0A1W2PR28 IQSEC2 IQ motif and SEC7 domain-containing protein 2 1 GALS(0.013)S(0.053)S(0.934)LRDLSDAGVCY 102.72 0.016476 10139000 1971 1797.9 1859.8 1597.4 2121 1615.9 1744.1 1579.7 1423.8 1078.9 TRUE FALSE 1803.3561 1680.856383 1733.561958 1720.432025 2036.516079 1707.390862 1627.754271 1565.888849 1571.809105 1212.562277 1.487227612 1.386202107 1.429668389 1.418840135 1.679514625 1.408085089 1.3424088 1.291388392 1.296270826 1 10.24384313 -8.537166773 0.69591646 1.00390649 1.469340237 0.736833685 0.083717725 0.426290404 0.470338167 0.088570128 0.035064682 2.90E-09 8.537166773 0.465433747 GAMPPAPVPAGTPAPPGPATMMPDGTLGLT(ph)PPTTER ddPTM_A459_MK2206_30min_R1 1 GAMPPAPVPAGTPAPPGPATMMPDGTLGLTPPTTER 36 0 Q15233-2;Q15233 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 1 GAMPPAPVPAGTPAPPGPAT(0.002)MMPDGT(0.063)LGLT(0.815)PPT(0.06)T(0.06)ER 80.323 2.15E-06 6201100 1604.1 1348.4 1399.7 1092.5 1553.7 1418.5 1371.8 1370.9 1062.8 947.6 TRUE FALSE 1467.662872 1260.618915 1304.692264 1176.644539 1491.812839 1498.814244 1280.289725 1358.914366 1173.281863 1064.995842 1.378092584 1.183684354 1.225067941 1.104834867 1.400768698 1.407342813 1.20215467 1.275980912 1.101677412 1 10.05663208 -8.431044162 2.496280828 1.000146226 1.270076686 0.481187833 0.094627705 0.245070192 3.169595435 0.094371455 0.02585392 3.71E-09 8.431044162 0.269930459 GANDFMCDEMER ddPTM_A459_MK2206_30min_R1 4 GANDFMCDEMER 12 0 F5H282;E7EQR6;P17987;F5GZ03;E7ERF2 F5H282 TCP1 T-complex protein 1 subunit alpha 0 ;;; 293.88 3.93E-54 43891800 9518.2 8697.9 9130.9 8280.2 10015.4 9042.1 8608.1 7670 7245.6 6451.7 FALSE TRUE 8708.627108 8131.665129 8511.119948 8917.942439 9616.46541 9554.055888 8033.869355 7602.941999 7998.806049 7250.985304 1.201026722 1.121456573 1.173788057 1.229893879 1.326228782 1.317621742 1.107969334 1.048539154 1.103133673 1 12.82396133 -7.459987111 5.993630715 1.060414872 1.22530496 0.63259134 0.061991869 0.170997661 12.31799716 0.030528741 0.020096837 3.47E-08 7.459987111 0.164890088 GAPHS(ph)SPAR ddPTM_A459_MK2206_30min_R2 1 GAPHSSPAR 9 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 GAPHS(0.689)S(0.311)PAR 94.363 0.01544 1132500 1222.3 457.09 0 525.83 1103.7 558.37 823.31 10755 5122.6 2743.9 TRUE FALSE 1315.880228 434.3915753 0 482.868007 1060.363192 579.6191616 715.208408 12160.71543 5568.154488 2654.366768 0.495741675 0.163651678 0 0.181914577 0.399478778 0.218364383 0.269445962 4.581399818 2.09773365 1 11.37415201 -7.726391364 23.47397952 2.754672802 0.236504378 0.61341214 0.837065034 48.93345319 32773.87901 0.363808164 0.210026543 1.88E-08 7.726391364 -2.518168424 GAPPGS(ph)PEPPALLAAPLAAGACPGGR ddPTM_A459_MK2206_30min_R2 2 GAPPGSPEPPALLAAPLAAGACPGGR 26 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 GAPPGS(1)PEPPALLAAPLAAGACPGGR;GAPPGS(1)PEPPALLAAPLAAGACPGGR 145.43 7.36E-11 29871000 48578 54837 45120 57057 59396 60919 49884 48655 59044 53923 TRUE FALSE 52297.16903 52113.87432 46624.27828 52395.26058 57063.8146 63237.31523 43334.17088 55014.37556 64179.54039 52163.49693 1.00256256 0.99904871 0.893810443 1.004443024 1.09394151 1.212290566 0.830737459 1.054652751 1.230353488 1 15.67075297 -6.054186995 5.552871303 1.067257385 0.965421736 0.163911664 0.108011714 0.409182989 27.96126394 0.032819741 0.043611142 8.83E-07 6.054186995 -0.101835649 GAPS(ph)SPATGVLPS(ph)PQGK ddPTM_A459_MK2206_30min_R2 1 GAPSSPATGVLPSPQGK 17 0 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 2 GAPS(0.5)S(0.5)PAT(0.001)GVLPS(1)PQGK 168.08 0.0001652 0 24896 22942 20810 21471 28113 22268 24465 16166 18794 24899 TRUE FALSE 26802.0569 21802.73364 21503.79501 19716.75062 27009.14236 23115.42434 21252.71611 18278.95171 20428.66815 24086.54767 1.112739662 0.905183007 0.892771987 0.818579353 1.121337218 0.959681921 0.882347956 0.758886328 0.848135998 1 14.55594001 -7.355137208 4.240424509 0.848106442 0.962149272 0.159105188 0.103930653 0.393868128 12.5144987 0.046081826 0.030319395 4.41E-08 7.355137208 0.11404283 GAPS(ph)SPATGVLPSPQGK ddPTM_A459_MK2206_30min_R1 1 GAPSSPATGVLPSPQGK 17 0 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 GAPS(0.855)S(0.145)PATGVLPSPQGK 265.43 5.85E-41 9102000 4951.8 3626.3 3835.9 3075.3 4016.4 4253.6 4039.3 3806.8 3618.3 3530.6 TRUE FALSE 4530.623407 3390.227211 3575.529795 3312.160139 3856.418283 4494.435156 3769.845667 3773.517549 3994.435233 3967.997383 1.141790926 0.854392502 0.901091773 0.834718328 0.971880249 1.132670897 0.950062539 0.950987913 1.006662769 1 11.95419536 -6.516935683 24.99540127 1.007041881 0.92237896 0.126859312 0.091171473 521.449969 2193129.369 0.029654889 0.030636218 3.04E-07 6.516935683 -0.084662921 GAPS(ph)SPATGVLPSPQGK ddPTM_A459_MK2206_30min_R2 1 GAPSSPATGVLPSPQGK 17 0 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 GAPS(0.84)S(0.16)PATGVLPSPQGK 244.54 4.01E-23 8368900 63538 59854 46514 59075 55150 48349 70226 45980 50504 52757 TRUE FALSE 68402.51813 56881.7374 48064.75354 54248.38353 52984.53389 50188.95507 61005.24184 51989.74387 54896.74663 51035.54341 1.340291757 1.11455142 0.941789787 1.062952991 1.038188885 0.98341179 1.195348139 1.018696783 1.075657139 1 15.63921473 -4.80533691 3.552634447 1.043643236 1.367212059 0.662702302 0.064361928 0.155163031 3.295484009 0.015964135 0.129757999 1.57E-05 4.80533691 0.323568823 GAPSQDDES(ph)GGIEDSPDR ddPTM_A459_MK2206_30min_R2 2 GAPSQDDESGGIEDSPDR 18 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GAPSQDDES(1)GGIEDSPDR;GAPSQDDES(1)GGIEDSPDR 166.52 1.45E-07 11371800 15830 14365.4 11046.3 20165.5 11523.2 14033 17275.1 12307.4 8438.8 14569.9 TRUE FALSE 17041.95697 13652.03513 11414.57813 18517.91414 11070.74127 14567.03565 15006.85862 13916.01944 9172.79157 14094.48536 1.20912233 0.968608273 0.809861293 1.3138411 0.785466158 1.033527318 1.064732641 0.98733789 0.65080713 1 13.78284318 -8.031400617 22.95769239 0.823292891 1.018530444 0.178608167 0.169476824 411.1921629 300626.5703 0.10737798 0.040723449 9.30E-09 8.031400617 0.195237553 GAPSQDDESGGIEDS(ph)PDR ddPTM_A459_MK2206_30min_R2 2 GAPSQDDESGGIEDSPDR 18 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GAPSQDDESGGIEDS(1)PDR;GAPSQDDESGGIEDS(1)PDR 261.94 9.61E-43 21864100 29237 24581 24471 35220 22997 29976 28699 23948 24206.1 27993 TRUE FALSE 31475.4072 23360.34328 25286.85093 32342.41334 22094.02223 31116.75769 24930.78683 27078.08583 26311.50282 27079.5907 1.162329503 0.862654962 0.933797383 1.194346462 0.81589203 1.149085229 0.920648584 0.999944428 0.971635913 1 14.72491831 GAPSS(ph)PATGVLPS(ph)PQGK ddPTM_A459_MK2206_30min_R2 2 GAPSSPATGVLPSPQGK 17 0 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 2 GAPS(0.32)S(0.664)PAT(0.016)GVLPS(1)PQGK;GAPS(0.291)S(0.668)PAT(0.04)GVLPS(1)PQGK 142.58 0.011184 0 43530 41392 32144 39582 40477 35064 40093 28966 32251 38211 TRUE FALSE 46862.69027 39336.53347 33215.66492 36348.02398 38887.6696 36398.38509 34828.74094 32751.95566 35056.13368 36964.1782 1.267786613 1.064179846 0.89859065 0.983331045 1.052036634 0.984693475 0.942229549 0.886045822 0.948381254 1 15.17384022 -4.844528168 2.909367096 0.962172252 1.298825722 0.800825621 0.046432481 0.156593271 2.06375694 0.013057735 0.117017815 1.43E-05 4.844528168 0.33665347 GAPSS(ph)PATGVLPSPQGK ddPTM_A459_MK2206_30min_R1 3 GAPSSPATGVLPSPQGK 17 0 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 GAPS(0.004)S(0.989)PAT(0.006)GVLPSPQGK;GAPS(0.001)S(0.999)PATGVLPSPQGK;GAPS(0.011)S(0.765)PAT(0.223)GVLPSPQGK 268.18 1.75E-51 61806000 16539 14621.1 14903.8 12973.5 14884.2 13533.2 15323.4 13847.1 13713.2 14104 TRUE FALSE 15132.2712 13669.26373 13892.17158 13972.72122 14291.3308 14299.43809 14301.20395 13726.03626 15138.73621 15851.31 0.954638525 0.862342843 0.876405267 0.881486844 0.901586733 0.902098192 0.902209593 0.86592441 0.955046379 1 13.95231445 -8.481723386 4.092937628 0.999624449 0.892468343 0.664904999 0.024878686 0.103359371 3.950199396 0.023073347 0.006046096 3.30E-09 8.481723386 -0.107156106 GAPSS(ph)PATGVLPSPQGK ddPTM_A459_MK2206_30min_R2 3 GAPSSPATGVLPSPQGK 17 0 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 GAPS(0.002)S(0.998)PATGVLPSPQGK;GAPSS(0.995)PAT(0.005)GVLPSPQGK;GAPS(0.014)S(0.983)PAT(0.002)GVLPSPQGK 262.24 2.24E-40 127799000 564287 578661 522169 591855 618166 601334 631084 485471 539361 581470 TRUE FALSE 607489.2466 549925.5362 539577.8538 543498.5532 593893.6968 624218.1867 548221.9127 548923.7266 586273.6448 562496.6815 1.079987254 0.977651165 0.959255177 0.96622535 1.055817245 1.109727768 0.974622484 0.97587016 1.042270406 1 19.10148506 -4.746360149 24.6227963 1.007057423 1.07998749 0.186212435 0.045880492 1338.665258 2185752.564 0.012440761 0.278212952 1.79E-05 4.746360149 0.072930067 GAPTT(ph)PAATPPSPK ddPTM_A459_MK2206_30min_R2 1 GAPTTPAATPPSPK 14 0 E9PAV3 E9PAV3 NACA "Nascent polypeptide-associated complex subunit alpha, muscle-specific form" 1 GAPT(0.059)T(0.552)PAAT(0.008)PPS(0.381)PK 134.04 0.0019257 0 15286 18254 15099 18637 17791 15027 16830 13945 16267 15501 TRUE FALSE 16456.30791 17347.5329 15602.39312 17114.29748 17092.43595 15598.86301 14620.20078 15767.65938 17681.87426 14995.20364 1.097438108 1.156872112 1.040492247 1.14131811 1.139860209 1.040256831 0.974991813 1.051513521 1.179168665 1 13.87221349 -6.770746753 24.99008159 1.047768602 1.114812491 0.24333924 0.05817134 302.445804 812053.8608 0.020772975 0.018564446 1.70E-07 6.770746753 0.067043889 GAPVNIS(ph)SSDLTGR ddPTM_A459_MK2206_30min_R1 2 GAPVNISSSDLTGR 14 0 P48730-2;H7BYT1;P48730;J3KRM8 P48730-2 CSNK1D Casein kinase I isoform delta 1 GAPVNIS(0.705)S(0.133)S(0.133)DLT(0.029)GR;GAPVNIS(0.754)S(0.224)S(0.02)DLT(0.001)GR 176.42 6.93E-05 32943000 3179.5 2901.5 3104.2 2652.7 5389.5 4401.7 5030.5 3043.7 2466.3 2735.9 TRUE FALSE 2909.066829 2712.611823 2893.495553 2857.011414 5174.824803 4650.92045 4694.924524 3017.089252 2722.680711 3074.843947 0.946086006 0.882194957 0.941021919 0.929156557 1.682955263 1.512571217 1.526882211 0.981217032 0.885469558 1 11.58629748 -6.067386739 24.99821615 1.29091262 0.921688413 0.311194319 0.246163759 226.5538809 84043.1466 0.079384298 0.10248475 8.56E-07 6.067386739 -0.369224207 GAPVNIS(ph)SSDLTGR ddPTM_A459_MK2206_30min_R2 1 GAPVNISSSDLTGR 14 0 P48730-2;H7BYT1;P48730;J3KRM8 P48730-2 CSNK1D Casein kinase I isoform delta 1 GAPVNIS(0.442)S(0.304)S(0.093)DLT(0.161)GR 130.47 0.00096881 15595000 18252 14512 13420 14879 17554 19131 17925 15366 11651 16367 TRUE FALSE 19649.38715 13791.35518 13867.4161 13663.3381 16864.74176 19859.04361 15571.42597 17374.38896 12664.38292 15832.94613 1.241044275 0.87105426 0.875858225 0.862968774 1.065167633 1.254286059 0.983482533 1.097356665 0.799875324 1 13.95064211 -4.744144949 24.581249 0.986539644 1.241045223 0.26971558 0.128857305 1333.336928 1894998.338 0.03414978 0.972657322 1.80E-05 4.744144949 0.254505579 GAPVNISSS(ph)DLTGR ddPTM_A459_MK2206_30min_R2 1 GAPVNISSSDLTGR 14 0 P48730-2;H7BYT1;P48730;J3KRM8 P48730-2 CSNK1D Casein kinase I isoform delta 1 GAPVNIS(0.153)S(0.1)S(0.702)DLT(0.045)GR 125.33 0.0013881 15623000 11643 15127 11331 14096 16372 19225 14122 11935 11006 14993 TRUE FALSE 12534.39703 14375.81518 11708.76988 12944.31171 15729.15302 19956.62085 12267.76444 13494.94548 11963.28199 14503.77964 0.864215904 0.991177165 0.807290939 0.892478515 1.084486486 1.375960015 0.845832241 0.930443361 0.824838924 1 13.82414129 -4.75601246 23.8419174 0.974812955 0.864215594 0.040358034 0.158047116 413.9984092 1818441.77 0.042088512 0.346081782 1.75E-05 4.75601246 -0.110597362 GAPVNISSSDLT(ph)GR ddPTM_A459_MK2206_30min_R2 1 GAPVNISSSDLTGR 14 0 P48730-2;H7BYT1;P48730;J3KRM8 P48730-2 CSNK1D Casein kinase I isoform delta 1 GAPVNIS(0.156)S(0.099)S(0.314)DLT(0.432)GR 103.11 0.020542 0 24975 30401 26798 22909 23718 21429 22801 22830 20087 22866 TRUE FALSE 26887.1052 28891.33055 27691.43194 21037.26142 22786.71215 22244.49561 19807.20131 25813.95939 21834.13095 22119.88429 1.215517443 1.30612485 1.251879602 0.951056576 1.030146082 1.005633453 0.895447781 1.16700246 0.987081608 1 14.43305622 -5.751717956 24.6552521 1.008638904 1.262669188 0.74244623 0.068151314 82.38837307 208948.9242 0.018298822 0.031183222 1.77E-06 5.751717956 0.254030283 GAQASS(ph)GSPALPR ddPTM_A459_MK2206_30min_R1 1 GAQASSGSPALPR 13 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 GAQAS(0.115)S(0.669)GS(0.216)PALPR 95.755 0.014739 7762100 1512.3 1725.6 1802.1 1278.3 1760.2 1755 1828.7 1696.5 1586.1 1483.8 TRUE FALSE 1383.670944 1613.263126 1679.778473 1376.754887 1690.087507 1854.366583 1706.71076 1681.667679 1750.980771 1667.624346 0.829725799 0.967401999 1.007288288 0.825578549 1.013470156 1.111980997 1.02343838 1.008421161 1.049985133 1 10.70357862 -6.500544268 23.94610368 1.04104376 0.918982652 0.525201571 0.059164385 380.3446102 407789.9291 0.018350615 0.02062224 3.16E-07 6.500544268 -0.122061108 GAQASS(ph)GSPALPR ddPTM_A459_MK2206_30min_R2 1 GAQASSGSPALPR 13 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 GAQAS(0.346)S(0.625)GS(0.03)PALPR 99.796 0.01403 0 12748 18649 14776 18939 19406 18435 17588 14274 18345 14821 TRUE FALSE 13723.99668 17722.91778 15268.62447 17391.62312 18644.02293 19136.55684 15278.67447 16139.66081 19940.61494 14337.39198 0.957217093 1.23613261 1.064951316 1.213025572 1.300377569 1.334730672 1.065652281 1.125704091 1.390811869 1 13.807495 -4.755641183 24.79458182 1.196831238 0.957216662 0.251519381 0.121480571 241.605972 1033052.493 0.029699986 0.25719082 1.76E-05 4.755641183 -0.239614576 GAQASSGS(ph)PALPR ddPTM_A459_MK2206_30min_R1 2 GAQASSGSPALPR 13 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 GAQAS(0.11)S(0.339)GS(0.55)PALPR;GAQAS(0.005)S(0.014)GS(0.981)PALPR 115.09 0.0040713 62600400 5022.4 4810.9 4553.9 4162.9 5423.8 4735.9 5570.5 5092.9 4323.8 4454.5 TRUE FALSE 4595.218506 4497.709536 4244.793956 4483.527279 5207.758561 5004.042565 5198.902109 5048.373312 4773.274483 5006.35709 0.917876696 0.898399666 0.84788078 0.895566816 1.040229146 0.999537683 1.038460105 1.008392574 0.953442672 1 12.28954548 -6.244632263 17.75237648 1.008328728 0.887531352 0.808064189 0.027857435 7.95958886 8406.396 0.008425275 0.010790306 5.69E-07 6.244632263 -0.120797376 GAQASSGS(ph)PALPR ddPTM_A459_MK2206_30min_R2 2 GAQASSGSPALPR 13 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 GAQAS(0.116)S(0.249)GS(0.635)PALPR;GAQAS(0.03)S(0.212)GS(0.759)PALPR 114.21 0.0043056 147840000 37545 39342 39410 46744 39642 47408 54219 34043 42959 43204 TRUE FALSE 40419.47407 37388.33349 40723.90973 42924.86567 38085.45589 49212.14466 47099.98017 38492.53699 46695.49617 41794.25702 0.967105936 0.894580647 0.974390087 1.027051771 0.911260508 1.177485812 1.126948618 0.921000629 1.117270637 1 15.35101709 -6.738088556 24.99934426 1.067254218 0.956621626 0.368027037 0.074446032 276.0092165 295494.1343 0.02502356 0.025008894 1.83E-07 6.738088556 -0.110632592 GAQPGRHS(ph)VTGYGDCAVGAR ddPTM_A459_MK2206_30min_R1 1 GAQPGRHSVTGYGDCAVGAR 20 1 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 GAQPGRHS(0.967)VT(0.024)GY(0.009)GDCAVGAR 49.708 0.042703 5853500 750.04 774.92 948.65 835.81 1089.5 834.98 940.87 701.05 760.12 895.73 TRUE FALSE 686.2451594 724.4725672 884.2582811 900.184231 1046.102908 882.255846 878.106279 694.9207938 839.1371941 1006.699795 0.681678056 0.719651053 0.87837336 0.894193319 1.039140877 0.876384251 0.872262301 0.690295953 0.833552563 1 9.97541781 -5.216780239 3.90481215 0.880164288 0.690911572 0.412271247 0.088513014 0.242822627 7.896364041 0.025169873 0.072197802 6.07E-06 5.216780239 -0.189252717 GAQPGRHS(ph)VTGYGDCAVGAR ddPTM_A459_MK2206_30min_R2 1 GAQPGRHSVTGYGDCAVGAR 20 1 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 GAQPGRHS(0.974)VT(0.017)GY(0.009)GDCAVGAR 48.51 0.047181 61917000 5602.7 9014.7 10021 7762.8 8053.8 6553.5 9575.5 5398.9 8603.4 5412.6 TRUE FALSE 6031.64702 8567.043107 10355.09514 7128.554408 7737.567345 6802.898035 8318.225348 6104.554767 9351.708181 5235.987305 1.151959825 1.636184851 1.977677663 1.361453723 1.477766636 1.299257931 1.588664155 1.16588418 1.786044854 1 12.35424588 GARPPAAGPGGDEDEDEEDTAPESALDT(ph)SLDK ddPTM_A459_MK2206_30min_R2 1 GARPPAAGPGGDEDEDEEDTAPESALDTSLDK 32 1 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2 INF2 Inverted formin-2 1 GARPPAAGPGGDEDEDEEDTAPES(0.002)ALDT(0.499)S(0.499)LDK 117.77 2.07E-16 2884700 22504 14924 17970 16701 13069 13579 20157 16573 13383 22456 TRUE FALSE 24226.92354 14182.89586 18569.11083 15336.47488 12555.84539 14095.75836 17510.36169 18739.148 14547.02915 21723.26256 1.115252531 0.652889768 0.854803038 0.705993164 0.577990776 0.648878515 0.806065002 0.862630461 0.669652135 1 14.40695317 -10.30842263 15.42276779 1 0.758579905 0.184181688 0.146985153 0 0 0.139826012 0.033912789 4.92E-11 10.30842263 -0.241420095 GAS(ph)PLGPGSAAGSGAAASGGLGLGLGGR ddPTM_A459_MK2206_30min_R1 2 GASPLGPGSAAGSGAAASGGLGLGLGGR 28 0 B4E1M0;E9PPE2;A0A6I8PS01;Q6P1R3-3;Q6P1R3 B4E1M0 MSANTD2 Myb/SANT-like DNA-binding domain-containing protein 2 1 GAS(0.985)PLGPGS(0.015)AAGSGAAASGGLGLGLGGR;GAS(0.998)PLGPGS(0.001)AAGS(0.001)GAAASGGLGLGLGGR 322.36 1.12E-159 30791000 2824.61 2597.69 2845.89 2276.56 3478 2602.23 3015.4 2826.34 2255.74 2591.4 TRUE FALSE 2584.362087 2428.579909 2652.718916 2451.901046 3339.463895 2749.566014 2814.248168 2801.629607 2490.232245 2912.442196 0.887352233 0.833863729 0.910822855 0.841871145 1.146619802 0.944075737 0.966284643 0.961952004 0.855032333 1 11.5080137 GAS(ph)PLGPGSAAGSGAAASGGLGLGLGGR ddPTM_A459_MK2206_30min_R2 4 GASPLGPGSAAGSGAAASGGLGLGLGGR 28 0 B4E1M0;E9PPE2;A0A6I8PS01;Q6P1R3-3;Q6P1R3 B4E1M0 MSANTD2 Myb/SANT-like DNA-binding domain-containing protein 2 1 GAS(0.998)PLGPGS(0.002)AAGSGAAASGGLGLGLGGR;GAS(0.996)PLGPGSAAGS(0.004)GAAASGGLGLGLGGR;GAS(1)PLGPGSAAGSGAAASGGLGLGLGGR;GAS(1)PLGPGSAAGSGAAASGGLGLGLGGR 213.71 7.99E-43 31755300 60191 84192 68319 83285 76874 83745 84409 63375.5 64928 80367 TRUE FALSE 64799.26924 80011.14771 70596.72136 76480.34908 73855.5405 86931.97466 73325.99691 71658.89545 70575.32008 77744.63137 0.833488668 1.029153349 0.908059118 0.983738012 0.949976084 1.118173347 0.943164764 0.921721464 0.907783841 1 16.24645543 -4.746250131 24.95627302 0.972191957 0.833488287 0.319225424 0.061324214 1067.367055 1753608.816 0.015502311 0.36117776 1.79E-05 4.746250131 -0.138703669 GASGTVLLAGSSLMAS(ph)PYK ddPTM_A459_MK2206_30min_R1 2 GASGTVLLAGSSLMASPYK 19 0 Q9NPG3;Q9NPG3-2 Q9NPG3 UBN1 Ubinuclein-1 1 GASGTVLLAGSSLMAS(1)PYK;GASGTVLLAGS(0.015)S(0.006)LMAS(0.979)PYK 137.27 0.00016341 9287900 3655.8 3020.5 3119.1 2356.43 2851.6 2673.87 2679.57 2758.9 2744.81 2474.29 TRUE FALSE 3344.855013 2823.864901 2907.384182 2537.922647 2738.014734 2825.262209 2500.820774 2734.779228 3030.142822 2780.823725 1.202828853 1.015477851 1.045511859 0.912651393 0.984605644 1.015980331 0.899309349 0.983442137 1.089656563 1 11.44129658 -4.047518639 1.334784059 0.983616742 2.151994519 0.582171479 0.053220736 5.606100459 2.110787223 0.015336174 14.32581644 8.96E-05 4.047518639 1.168377778 GASGTVLLAGSSLMAS(ph)PYK ddPTM_A459_MK2206_30min_R2 1 GASGTVLLAGSSLMASPYK 19 0 Q9NPG3;Q9NPG3-2 Q9NPG3 UBN1 Ubinuclein-1 1 GASGTVLLAGSSLMAS(1)PYK 184.83 7.39E-15 0 16137 17194 15479 15975 14551 12782 17498 13463 12957 14216 TRUE FALSE 17372.46113 16340.17096 15995.06213 14669.7914 13979.65463 13268.42797 15200.49158 15222.66033 14083.97644 13752.13308 1.263255745 1.188191742 1.163096811 1.066728435 1.016544455 0.964826903 1.105318825 1.106930847 1.024130319 1 13.74736779 -5.54566604 1.645823263 1.040674307 1.239139457 0.758968749 0.043793105 0.216519256 1.130795199 0.014548551 0.042053639 2.85E-06 5.54566604 0.19846515 GAST(ph)VSSSSSTK ddPTM_A459_MK2206_30min_R2 1 GASTVSSSSSTK 12 0 Q5VTQ0-2;Q5VTQ0-3;Q5VTQ0-4;Q5VTQ0 Q5VTQ0-2 TTC39B Tetratricopeptide repeat protein 39B 1 GAS(0.116)T(0.875)VS(0.001)S(0.001)S(0.006)SSTK 92.295 0.043442 0 31542 38122 32918 40600 33546 24251 24802 26595 22529 25829 TRUE FALSE 33956.87977 36228.91691 34015.46969 37282.85013 32228.81548 25173.8888 21545.46761 30071.05781 24488.5317 24986.20185 1.359025273 1.449956946 1.361370163 1.492137555 1.289864529 1.007511624 0.862294627 1.203506559 0.980082201 1 14.60884399 -6.645998662 3.604762856 1.013202154 1.412580008 0.832528717 0.086492184 0.091964354 2.300075002 0.029742718 0.029495962 2.26E-07 6.645998662 0.399377853 GATQQILDEAER ddPTM_A459_MK2206_30min_R2 2 GATQQILDEAER 12 0 F8VQ14;F5GWF6;P78371-2;P78371 F8VQ14 CCT2 T-complex protein 1 subunit beta 0 ; 169.89 0.0045568 9515200 29031 43795 34920 39117 36012 39882 33098 26915 34932 35195 FALSE TRUE 31253.63568 41620.20398 36084.21537 35921.01597 34597.98793 41399.73746 28752.19284 30432.88291 37970.32222 34046.59003 0.917966694 1.222448531 1.059848147 1.055054733 1.016195393 1.215973095 0.844495523 0.89385994 1.115245967 1 15.05522269 -7.267854921 24.99821053 0.954555361 1.082545754 0.224809621 0.106685999 749.3838167 2919965.374 0.042541594 0.02947926 5.40E-08 7.267854921 0.127990393 GAVAAEGAS(ph)DTER ddPTM_A459_MK2206_30min_R1 2 GAVAAEGASDTER 13 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.999)DT(0.001)ER;GAVAAEGAS(0.929)DT(0.071)ER 215.02 1.18E-06 11401000 3759.4 3810 3237.3 2362.3 3412.8 3120.7 4105.4 2904.55 4635.8 6169.3 TRUE FALSE 3439.643289 3561.968308 3017.561096 2544.244755 3276.860949 3297.391337 3831.536257 2879.155826 5117.707999 6933.59946 0.496083356 0.51372571 0.435208453 0.366944294 0.472606035 0.475567035 0.552604211 0.415246921 0.73810263 1 12.75938878 -8.50994731 2.916589538 0.998886214 0.466648924 0.918071023 0.051072407 0.062812319 1.282284439 0.051567887 0.013804305 3.09E-09 8.50994731 -0.53223729 down GAVAAEGAS(ph)DTER ddPTM_A459_MK2206_30min_R2 1 GAVAAEGASDTER 13 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.686)DT(0.314)ER 183.06 0.00011948 14926000 31325 28654 29762 49893 33158 64204 30065 28859 44461 28268 TRUE FALSE 33723.26608 27231.08403 30754.25023 45816.5823 31856.05031 66647.32821 26117.42939 32630.97039 48328.13741 27345.61748 1.233223792 0.995811634 1.124650056 1.675463439 1.164941708 2.43722155 0.955086474 1.193279706 1.767308325 1 14.73902202 -5.691888704 9.27396471 1.47188513 1.103593832 0.119702638 0.418442705 0.670688131 82.96438661 0.111226237 0.192712542 2.03E-06 5.691888704 -0.368291298 GAVAAEGAS(ph)DTEREEPTESQGLAAR ddPTM_A459_MK2206_30min_R1 2 GAVAAEGASDTEREEPTESQGLAAR 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.821)DT(0.179)EREEPTESQGLAAR;GAVAAEGAS(0.806)DT(0.194)EREEPTESQGLAAR 121.48 4.24E-08 189689000 3677.9 3905.1 3535.1 3004.4 3825.7 3627.4 3938.4 3068.5 3018.8 2666.4 TRUE FALSE 3365.075292 3650.87728 3295.147261 3235.799409 3673.314268 3832.780253 3675.676522 3041.672428 3332.615063 2996.733762 1.122914332 1.218285497 1.099579583 1.079775404 1.225772644 1.278985908 1.226560921 1.014995882 1.112082463 1 11.5491752 -7.765352336 24.9998451 1.047654358 1.179154691 0.477100824 0.065404902 100.7388119 643600.5672 0.037073519 0.018862229 1.72E-08 7.765352336 0.131500334 GAVAAEGAS(ph)DTEREEPTESQGLAAR ddPTM_A459_MK2206_30min_R2 2 GAVAAEGASDTEREEPTESQGLAAR 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.963)DT(0.037)EREEPTESQGLAAR;GAVAAEGAS(0.764)DT(0.232)EREEPT(0.002)ES(0.002)QGLAAR 104.03 4.04E-07 233510000 75323 81368 77695 73192 78646 80173 91540 58342 76721 71065 TRUE FALSE 81089.78679 77327.38344 80285.31252 67211.97947 75557.96288 83224.03969 79520.68804 65967.49972 83394.0539 68746.15487 1.179553779 1.124824851 1.167851681 0.977683473 1.099086386 1.210599194 1.156729248 0.959580937 1.213072266 1 16.0689914 -14.52287875 0.253773769 0.288256125 1.126172282 0.147240371 0.084470456 387.0726094 3.819143011 143.4559553 0.118338395 3.00E-15 14.52287875 0.837916157 GAVAAEGASDT(ph)EREEPTESQGLAAR ddPTM_A459_MK2206_30min_R1 1 GAVAAEGASDTEREEPTESQGLAAR 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.017)DT(0.972)EREEPT(0.006)ES(0.006)QGLAAR 126.16 1.01E-07 63459000 1519.8 1716.3 1429.4 1439.1 1783.7 1694.5 1599.5 1314.6 1284.1 1343.3 TRUE FALSE 1390.533029 1604.568558 1332.376311 1549.939731 1712.651452 1790.441126 1492.800273 1303.106591 1417.58679 1509.718145 0.921054724 1.06282657 0.88253315 1.026641785 1.134418009 1.185943966 0.98879402 0.863145611 0.938974467 1 10.56006352 -7.52709578 24.57174127 0.925829945 1.038392169 0.205359364 0.089101637 156.1017135 909541.8123 0.044648629 0.025924344 2.97E-08 7.52709578 0.112562225 GAVAAEGASDTEREEPT(ph)ESQGLAAR ddPTM_A459_MK2206_30min_R1 1 GAVAAEGASDTEREEPTESQGLAAR 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.001)DT(0.011)EREEPT(0.494)ES(0.494)QGLAAR 102.67 2.55E-06 81842000 918.05 785.01 1051.8 777.04 1076.2 1001.6 1029 719.78 869.29 692.9 TRUE FALSE 839.9650266 733.9057063 980.4067465 836.8877554 1033.332675 1058.309726 960.3572875 713.4870393 959.6558063 778.7416831 1.078618295 0.942425097 1.258962719 1.074666701 1.326926114 1.358999716 1.23321675 0.91620502 1.232315962 1 9.60500104 -5.259776855 24.99162587 1.182639045 1.010521694 0.185835204 0.137131139 231.9156286 3486153.766 0.036423553 0.086553037 5.50E-06 5.259776855 -0.172117351 GAVAAEGASDTEREEPT(ph)ESQGLAAR ddPTM_A459_MK2206_30min_R2 3 GAVAAEGASDTEREEPTESQGLAAR 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.021)DT(0.002)EREEPT(0.489)ES(0.489)QGLAAR;GAVAAEGAS(0.071)DT(0.304)EREEPT(0.449)ES(0.176)QGLAAR;GAVAAEGAS(0.06)DT(0.214)EREEPT(0.363)ES(0.363)QGLAAR 95.307 1.08E-05 407300300 14388 18139.2 22562 32723.9 38585.7 28064.3 30410.3 13849.6 20303.1 23799.2 TRUE FALSE 15489.55634 17238.4337 23314.20582 30050.25269 37070.63154 29132.3066 26417.39108 15659.79027 22069.02694 23022.63405 0.672796879 0.748760271 1.01266457 1.305248245 1.610182026 1.265376782 1.147453025 0.680191078 0.958579582 1 14.49076528 -3.740040111 12.06110737 1.054823152 0.985178725 0 0.286017977 0 0 0.074131414 0 0.000181953 3.740040111 -0.069644428 GAVDGGLSIPHSTK ddPTM_A459_MK2206_30min_R2 2 GAVDGGLSIPHSTK 14 0 A0A2R8Y6J3;P46777;Q5T7N0 A0A2R8Y6J3 RPL5 60S ribosomal protein L5 0 ; 94.09 0.01912 8154800 63918 113534 81376 135739 141368 153773 141404 103948 110562 104307 FALSE TRUE 68811.61122 107896.0667 84089.03522 124648.6895 135817.182 159624.9393 122837.4849 117534.3605 120178.4829 100903.4711 0.681954847 1.069299851 0.833361175 1.23532608 1.346010999 1.581956869 1.217376207 1.164819794 1.191024269 1 16.62261628 -5.797072589 6.471836352 1.273431226 0.881927197 0.528190594 0.165974395 0.139847935 16.58416282 0.047616549 0.072819763 1.60E-06 5.797072589 -0.39150403 GAVEKGEELSCEER ddPTM_A459_MK2206_30min_R1 1 GAVEKGEELSCEER 14 1 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 0 123.26 0.004663 14409000 2169.2 2429.5 2344.5 2235.6 3168.3 2631.6 2287.5 2694 1328.5 646.87 FALSE TRUE 1984.698149 2271.339108 2185.361872 2407.786299 3042.099902 2780.598918 2134.905049 2670.446642 1466.602329 727.0091392 2.72994938 3.124223598 3.005962036 3.311906508 4.184403934 3.824709715 2.93655875 3.673195422 2.017309343 1 9.50582969 -4.47580419 1.757628156 3.171344919 2.195028827 0 0.886217126 13.24334944 20.7633768 0.230131962 28.07367141 3.34E-05 4.47580419 -0.976316092 GAVYQAPS(ph)PPPAPVGLGSMAVFR ddPTM_A459_MK2206_30min_R2 2 GAVYQAPSPPPAPVGLGSMAVFR 23 0 Q13057-2;K7EPT0;K7ESK6 Q13057-2 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase 1 GAVY(0.003)QAPS(0.996)PPPAPVGLGSMAVFR;GAVY(0.044)QAPS(0.955)PPPAPVGLGS(0.001)MAVFR 122.83 1.05E-05 7522700 39268 42356 38603 49861 45900 49841 51397 38943 43082 45548 TRUE FALSE 42274.38827 40252.66263 39890.00475 45787.1968 44097.73537 51737.73418 44648.51216 44032.98381 46829.19449 44061.77249 0.959434582 0.913550689 0.90532002 1.039159213 1.000816192 1.174209099 1.013316298 0.999346629 1.062807777 1 15.42723991 -5.76878106 24.56280143 1.044027268 0.924846652 0.519382599 0.05076815 101.910609 340960.0124 0.014480427 0.021987026 1.70E-06 5.76878106 -0.119180616 GCALQCAILS(ph)PAFK ddPTM_A459_MK2206_30min_R1 1 GCALQCAILSPAFK 14 0 A0A087WYC1;P34932;A0A087WTS8;D6RJ96;E9PDE8;O95757;Q92598-2;Q92598;Q92598-3;Q92598-4;A0A0A0MSM0 A0A087WYC1;D6RJ96;Q92598-2 HSPA4;HSPA4L;HSPH1 Heat shock 70 kDa protein 4;Heat shock 70 kDa protein 4L;Heat shock protein 105 kDa 1 GCALQCAILS(1)PAFK 124.78 0.0014334 14578000 3641.2 4295.8 4573.9 3487.9 4191 3667 4184.7 4187.7 3661.9 3531.1 TRUE FALSE 3331.496819 4016.142639 4263.436412 3756.538662 4024.063595 3874.622371 3905.546298 4151.08738 4042.567609 3968.559326 0.839472601 1.011990072 1.074303308 0.946574904 1.013986 0.976329709 0.984121939 1.04599353 1.018648652 1 11.95439966 -4.760621972 24.93161114 1.008036064 0.839472398 0.69127407 0.03378611 11.15039343 339883.9719 0.008452174 0.049553186 1.74E-05 4.760621972 -0.168563667 GCALQCAILS(ph)PAFK ddPTM_A459_MK2206_30min_R2 2 GCALQCAILSPAFK 14 0 A0A087WYC1;P34932;A0A087WTS8;D6RJ96;E9PDE8;O95757;Q92598-2;Q92598;Q92598-3;Q92598-4;A0A0A0MSM0 A0A087WYC1;D6RJ96;Q92598-2 HSPA4;HSPA4L;HSPH1 Heat shock 70 kDa protein 4;Heat shock 70 kDa protein 4L;Heat shock protein 105 kDa 1 GCALQCAILS(1)PAFK;GCALQCAILS(1)PAFK 145.43 0.00051719 12130500 53306 60363 53480 56076 58861 53551 60638 48161 45677 57944 TRUE FALSE 57387.14835 57365.4612 55262.99651 51494.41142 56549.82139 55588.92083 52676.15776 54455.80806 49649.90289 56053.29203 1.023796217 1.023409315 0.985900997 0.918668816 1.008858166 0.991715541 0.939751366 0.971500622 0.885762479 1 15.77451148 -5.417080848 3.85015962 0.960356037 1.023107131 0.333493184 0.035852228 0.265918694 6.937452018 0.009567672 0.02129925 3.83E-06 5.417080848 0.062751094 GCDS(ph)PDPDTSYVLTPHTEEK ddPTM_A459_MK2206_30min_R1 2 GCDSPDPDTSYVLTPHTEEK 20 0 Q02078-3;Q02078-5;Q02078 Q02078-3 MEF2A Myocyte-specific enhancer factor 2A 1 GCDS(1)PDPDTSYVLTPHTEEK;GCDS(0.996)PDPDT(0.002)S(0.002)YVLTPHTEEK 125.77 0.00014626 20312700 5847.5 5334.5 6031 5078.5 5349.4 4900.4 5666.3 5266.1 5562.4 5059.6 TRUE FALSE 5350.139419 4987.22308 5621.632523 5469.64695 5136.32207 5177.856413 5288.311466 5220.059043 6140.631385 5686.421446 0.940862275 0.877040706 0.98860638 0.961878574 0.903260885 0.910565012 0.929989364 0.917986662 1.079876236 1 12.47330531 -8.252097727 24.99440779 1.039938119 0.928730347 0.626474697 0.034334736 368.1556627 985038.9253 0.023720529 0.008716269 5.60E-09 8.252097727 -0.111207772 GCDS(ph)PDPDTSYVLTPHTEEK ddPTM_A459_MK2206_30min_R2 3 GCDSPDPDTSYVLTPHTEEK 20 0 Q02078-3;Q02078-5;Q02078 Q02078-3 MEF2A Myocyte-specific enhancer factor 2A 1 GCDS(1)PDPDTSYVLTPHTEEK;GCDS(0.969)PDPDT(0.004)S(0.004)Y(0.017)VLT(0.005)PHTEEK;GCDS(0.471)PDPDT(0.08)S(0.08)Y(0.368)VLT(0.001)PHTEEK 151.01 8.22E-06 47249900 241704 294424 274427 294531 284614 281302 297288 233776 239253 245110 TRUE FALSE 260209.0441 279803.3323 283576.2592 270466.8751 273438.6243 292007.1447 258253.7285 264331.3259 260062.7935 237112.0808 1.097409475 1.180046716 1.195958714 1.140671004 1.153204102 1.231515255 1.089163098 1.114794847 1.096792676 1 17.85520964 -8.501720476 0.771887517 1.001893754 1.164657585 0.608834218 0.038946204 0.464378112 0.624974994 0.037723151 0.014215368 3.15E-09 8.501720476 0.16276383 GCGFPVGEHS(ph)PHSR ddPTM_A459_MK2206_30min_R2 2 GCGFPVGEHSPHSR 14 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 GCGFPVGEHS(0.954)PHS(0.046)R;GCGFPVGEHS(0.779)PHS(0.221)R 102.39 0.0050421 13409200 146937 192917 143086 195435 173185 192545 181347 150920 160653 172762 TRUE FALSE 158186.6097 183337.0223 147856.4158 179467.3353 166384.8867 199872.4349 157535.9211 170645.7622 174626.3075 167124.7901 0.946517926 1.097006747 0.884706666 1.073852271 0.995572749 1.195947261 0.942624496 1.021067922 1.044885726 1 17.35056622 GCITIIGGGDT(ph)ATCCAK ddPTM_A459_MK2206_30min_R2 1 GCITIIGGGDTATCCAK 17 0 P00558-2;P00558 P00558-2 PGK1 Phosphoglycerate kinase 1 1 GCITIIGGGDT(0.993)AT(0.007)CCAK 156 0.00044782 0 11874 9533.4 9803.1 11608 10067 9283.8 11326 10056 8143.5 8895.6 TRUE FALSE 12783.08257 9059.985219 10129.93046 10659.58927 9671.718997 9637.101514 9838.882595 11370.35373 8851.80691 8605.337301 1.485483035 1.052833248 1.177168321 1.238718355 1.123920964 1.119898172 1.143346536 1.321314125 1.028641482 1 13.07101603 -1.52287903 0.021021265 1.56E-06 2.687463843 0.278048598 0.118695298 4465.656602 7.258588376 339.0403495 630.4825951 0.02999998 1.52287903 2.687462281 GCPSPS(ph)PSEVR ddPTM_A459_MK2206_30min_R1 1 GCPSPSPSEVR 11 0 B4E099;Q8NFT6-4;Q8NFT6-2;Q8NFT6 B4E099 DBF4B Protein DBF4 homolog B 1 GCPS(0.261)PS(0.661)PS(0.078)EVR 109.39 0.0094245 3561100 2289.3 1403.1 1875.5 1512.2 2412.8 2088.7 2435.3 1837.4 1664.8 1563 TRUE FALSE 2094.583013 1311.757935 1748.196285 1628.669906 2316.693067 2206.960389 2272.84558 1821.335806 1837.861918 1756.63624 1.1923829 0.746744206 0.995195389 0.927152628 1.31882345 1.256355948 1.293862399 1.03683151 1.046239327 1 10.77859976 -6.239547675 24.73350581 1.172169393 0.951883183 0.295367363 0.144786284 820.5934531 927116.0091 0.042912116 0.055351114 5.76E-07 6.239547675 -0.220286209 GCT(ph)PSGEGADSEPR ddPTM_A459_MK2206_30min_R1 1 GCTPSGEGADSEPR 14 0 Q92917 Q92917 GPKOW G patch domain and KOW motifs-containing protein 1 GCT(0.921)PS(0.077)GEGADS(0.002)EPR 122.52 0.0041211 1652300 717.99 585.7 526.28 479.59 624.88 593.64 566.35 717.6 562.15 528.98 TRUE FALSE 656.9211802 547.5708235 490.5575799 516.5281049 599.9897064 627.2513838 528.5698249 711.3260989 620.5875042 594.514036 1.104971692 0.921039354 0.825140451 0.868824071 1.00921033 1.055065727 0.889078799 1.196483272 1.043856775 1 9.215567061 -6.436067221 5.452230788 1.039278729 0.92241647 0.211537861 0.097368192 0.348202682 16.7462722 0.03168411 0.035732916 3.66E-07 6.436067221 -0.11686226 GCT(ph)PSGEGADSEPR ddPTM_A459_MK2206_30min_R2 2 GCTPSGEGADSEPR 14 0 Q92917 Q92917 GPKOW G patch domain and KOW motifs-containing protein 1 GCT(0.839)PS(0.07)GEGADS(0.091)EPR;GCT(0.988)PS(0.012)GEGADSEPR 140.33 0.00094869 0 15217.4 21558 15401.1 21711 17710.4 19885.5 20609.9 15009 17384.8 18822.3 TRUE FALSE 16382.45584 20487.46107 15914.56499 19937.14185 17015.00071 20642.25664 17903.79537 16970.72783 18896.89848 18208.12989 0.899733028 1.125182058 0.874036218 1.094958239 0.934472722 1.133683512 0.983285789 0.932041233 1.03782753 1 14.15229513 -4.482159964 15.42516876 1.009526754 0.433507779 0.14433625 0.082258538 619467.5554 7395442.152 0.018862839 9935000.157 3.29E-05 4.482159964 -0.576018975 GCT(ph)WGPNSIQMK ddPTM_A459_MK2206_30min_R1 1 GCTWGPNSIQMK 12 0 Q5TCX8;Q5TCX8-3 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 GCT(0.807)WGPNS(0.193)IQMK 136.3 0.0033177 11063000 1876.8 1684.6 1913.2 1380.1 1779.1 1709.4 1943.9 1495.6 1733.2 1759.4 TRUE FALSE 1717.168305 1574.932234 1783.337314 1486.395541 1708.23468 1806.184751 1814.225978 1482.524127 1913.372342 1977.367755 0.8684112 0.796479173 0.901874378 0.751704147 0.863893262 0.913428848 0.91749548 0.749746284 0.967636059 1 10.9493655 -6.520304931 24.02579365 0.893860233 0.829334858 0.200052046 0.072328331 119.2042117 1112758.948 0.022681215 0.023095767 3.02E-07 6.520304931 -0.064525375 GDAAS(ph)SPAPAASVGSSQGGAR ddPTM_A459_MK2206_30min_R1 2 GDAASSPAPAASVGSSQGGAR 21 0 E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2;F8WCC1 E7EXA6 CHTF18 Chromosome transmission fidelity protein 18 homolog 1 GDAAS(0.906)S(0.093)PAPAASVGSSQGGAR;GDAAS(0.5)S(0.5)PAPAASVGSSQGGAR 335.14 2.34E-156 45061100 5534.9 4592.6 5329 4505.7 5554.7 4385 5966.8 4748.5 4498.9 4150.8 TRUE FALSE 5064.12769 4293.620905 4967.282327 4852.729795 5333.444537 4633.274911 5568.765659 4706.984365 4966.576754 4665.032441 1.08555037 0.920383933 1.064790522 1.040234951 1.143281339 0.993192431 1.193724959 1.008992847 1.064639275 1 12.1876714 -5.47242829 24.98952092 1.068323693 1.000372101 0.103086291 0.070450767 657.2939866 325574.7673 0.017099559 0.035595007 3.37E-06 5.47242829 -0.067951592 GDAAS(ph)SPAPAASVGSSQGGAR ddPTM_A459_MK2206_30min_R2 3 GDAASSPAPAASVGSSQGGAR 21 0 E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2;F8WCC1 E7EXA6 CHTF18 Chromosome transmission fidelity protein 18 homolog 1 GDAAS(0.5)S(0.5)PAPAASVGSSQGGAR;GDAAS(0.847)S(0.153)PAPAASVGSSQGGAR;GDAAS(0.5)S(0.5)PAPAASVGSSQGGAR 292.35 7.41E-87 51052100 30883.8 34629.4 29114.1 39060.2 35464.8 35926 38739.7 29746.8 31018.7 36614.2 TRUE FALSE 33248.28747 32909.75435 30084.74956 35868.85671 34072.27376 37293.1891 33653.13086 33634.8089 33716.65046 35419.48165 0.938700566 0.929142743 0.849384242 1.012687229 0.961964212 1.052900476 0.950130529 0.949613245 0.951923882 1 15.11225548 -5.775071136 24.99999215 0.981344466 0.908082524 0.461410061 0.038078218 212.5501907 389806.6574 0.010964263 0.016362191 1.68E-06 5.775071136 -0.073261942 GDAASS(ph)PAPAASVGSSQGGAR ddPTM_A459_MK2206_30min_R1 2 GDAASSPAPAASVGSSQGGAR 21 0 E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2;F8WCC1 E7EXA6 CHTF18 Chromosome transmission fidelity protein 18 homolog 1 GDAAS(0.094)S(0.905)PAPAASVGSSQGGAR;GDAAS(0.074)S(0.926)PAPAASVGSSQGGAR 351.47 1.51E-195 43400900 7752.5 7385.9 6951.8 6123.8 7914.9 6702.4 8311.8 6748.9 6826.8 6640.7 TRUE FALSE 7093.109165 6905.076568 6479.931185 6595.456137 7599.632773 7081.884096 7757.334988 6689.895079 7536.47029 7463.400051 0.950385765 0.925191805 0.86822777 0.883706634 1.01825344 0.948881749 1.039383516 0.896360242 1.009790476 1 12.8656173 -6.254270041 24.99832922 0.981131689 0.905425391 0.443449034 0.042944629 553.8862736 1931310.857 0.012534046 0.015821867 5.57E-07 6.254270041 -0.075706298 GDAASS(ph)PAPAASVGSSQGGAR ddPTM_A459_MK2206_30min_R2 1 GDAASSPAPAASVGSSQGGAR 21 0 E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2;F8WCC1 E7EXA6 CHTF18 Chromosome transmission fidelity protein 18 homolog 1 GDAAS(0.227)S(0.773)PAPAASVGSSQGGAR 269.99 6.29E-60 48404000 48345 55910 49944 51810 56938 62725 67964 45486 49981 53640 TRUE FALSE 52046.33037 53133.5907 51609.10803 47576.95727 54702.32803 65112.04383 59040.24516 51431.17638 54328.25704 51889.73119 1.003017922 1.023971207 0.994591933 0.916885792 1.054203342 1.254815593 1.137802101 0.991162899 1.046994382 1 15.66316144 -6.514838016 24.8257285 1.096128261 0.987815792 0.286137745 0.074970785 464.2751344 1433453.908 0.025993083 0.027172072 3.06E-07 6.514838016 -0.108312469 GDAVANHVPAGWPDQSLAES(ph)DSEDPSGKPR ddPTM_A459_MK2206_30min_R2 1 GDAVANHVPAGWPDQSLAESDSEDPSGKPR 30 1 A0A6I8PL36;A0A6I8PRU0;Q9NYQ6 A0A6I8PL36 CELSR1 Cadherin EGF LAG seven-pass G-type receptor 1 1 GDAVANHVPAGWPDQS(0.326)LAES(0.601)DS(0.068)EDPS(0.005)GKPR 68.948 0.00013953 6925800 20004 13882 13901 15735 16478 17418 29109 15330 20788 21917 TRUE FALSE 21535.52162 13192.64007 14364.4524 14449.40017 15830.99092 18080.8542 25286.95333 17333.68364 22596.10266 21201.85008 1.01573785 0.622240041 0.677509385 0.681516005 0.746679694 0.852796059 1.192676735 0.81755524 1.065760892 1 14.37190254 -7.001513428 4.870675572 1.007401912 0.737723584 0.483248125 0.131124376 0.159699856 10.65709131 0.047767215 0.039544187 9.97E-08 7.001513428 -0.269678328 GDCSTNS(ph)PVGVSK ddPTM_A459_MK2206_30min_R2 1 GDCSTNSPVGVSK 13 0 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 NSD1 "Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific" 1 GDCS(0.006)T(0.035)NS(0.905)PVGVS(0.054)K 114.54 0.0047447 0 20684 19000 16362 23303 18849 18834 20524 15956 16959 21578 TRUE FALSE 22267.58294 18056.48763 16907.50091 21399.07036 18108.89355 19550.74107 17829.17415 18041.50399 18434.06317 20873.91163 1.066766179 0.865026544 0.809982394 1.025158616 0.867537138 0.936611279 0.854136707 0.864308727 0.883114938 1 14.34941336 GDDDEES(ph)DEEAVK ddPTM_A459_MK2206_30min_R2 1 GDDDEESDEEAVK 13 0 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 GDDDEES(1)DEEAVK 156.24 0.00010135 0 43942 38897 44182 23497 32458 17217 48112 34619 27701 43331 TRUE FALSE 47306.23331 36965.43154 45655.00583 21577.21994 31183.53583 17872.205 41794.83661 39143.82216 30110.38291 41917.11302 1.128566113 0.881869692 1.089173432 0.514759209 0.743933291 0.426370132 0.9970829 0.933838696 0.718331506 1 15.35525174 -5.735167483 24.99996907 0.754340402 1.018069847 0.302385152 0.188062924 294.8308119 280554.5753 0.051800718 0.089685783 1.84E-06 5.735167483 0.263729444 GDDDEES(ph)DEEAVKK ddPTM_A459_MK2206_30min_R1 2 GDDDEESDEEAVKK 14 1 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 GDDDEES(1)DEEAVKK;GDDDEES(1)DEEAVKK 180.62 0.00013279 17224100 3365.84 4864.92 4253.2 3253.36 2667.5 2777.94 3479.29 3279.25 4491.18 4113.53 TRUE FALSE 3079.557633 4548.212824 3964.504634 3503.934351 2561.247826 2935.224562 3247.192912 3250.579863 4958.054233 4623.145152 0.666117444 0.983791915 0.857534104 0.757911386 0.554005497 0.634897773 0.702377452 0.70311006 1.072441827 1 12.17465894 -8.261014823 24.99916049 1.036220945 0.735658496 0.532187264 0.113884368 32.53617217 1916150.01 0.099615635 0.032290448 5.48E-09 8.261014823 -0.300562449 GDDDEES(ph)DEEAVKK ddPTM_A459_MK2206_30min_R2 4 GDDDEESDEEAVKK 14 1 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 GDDDEES(1)DEEAVKK;GDDDEES(1)DEEAVKK;GDDDEES(1)DEEAVKK;GDDDEES(1)DEEAVKK 194.77 0.00015 91915000 455971 305918 333607 326091 298062 219981 446951 331439 193805 375562 TRUE FALSE 490880.4903 290726.557 344729.2909 299448.3222 286358.5882 228352.5311 388265.7968 374759.2153 210661.8086 363307.4427 1.351143502 0.800221858 0.948863828 0.824228427 0.788199069 0.628537994 1.068697613 1.031520886 0.579844462 1 18.4708314 -4.757733578 24.99943986 0.853137177 1.351144209 0.480693476 0.15556535 94.57849159 637935.6286 0.038285286 0.277411195 1.75E-05 4.757733578 0.498007032 GDDGIFDDNFIEER ddPTM_A459_MK2206_30min_R1 2 GDDGIFDDNFIEER 14 0 O60493-4;O60493;O60493-2 O60493-4 SNX3 Sorting nexin-3 0 ; 223.22 5.39E-08 8554800 1596.77 1717.64 1649.96 1291.68 1735.28 1741.26 1488.04 1354.67 1604.95 1038.95 FALSE TRUE 1460.956327 1605.821324 1537.965312 1391.165417 1666.160123 1839.848636 1388.775567 1342.826263 1771.790296 1167.66297 1.251179805 1.375243855 1.317131186 1.191410067 1.426918697 1.575667538 1.189363372 1.150011859 1.517381592 1 10.1894082 -11.14988282 8.220335643 0.999716911 1.329666779 0.350215167 0.13589762 0.000715467 3.25E-05 0.133524265 0.032357536 7.08E-12 11.14988282 0.329949868 GDDGIFDDNFIEER ddPTM_A459_MK2206_30min_R2 2 GDDGIFDDNFIEER 14 0 O60493-4;O60493;O60493-2 O60493-4 SNX3 Sorting nexin-3 0 ; 191.53 0.0014806 6019900 18002.7 20469.8 20226.6 20230.7 20052.2 22009 18229.9 18513.1 21784.1 21535.5 FALSE TRUE 19381.00055 19453.2995 20900.94475 18577.7871 19264.84987 22846.56792 15836.29223 20932.82573 23678.84164 20832.7984 0.930311914 0.933782353 1.003271109 0.891756678 0.924736538 1.096663419 0.760161546 1.004801435 1.136613583 1 14.34656902 -7.999091735 24.99986812 1.069107065 0.937043708 0.287388789 0.085289549 34.14138813 939750.3703 0.04500308 0.021343388 1.00E-08 7.999091735 -0.132063357 GDDLLPAGTEDYIHIR ddPTM_A459_MK2206_30min_R1 2 GDDLLPAGTEDYIHIR 16 0 K7EM18;P41567;O60739 K7EM18 EIF1;EIF1B Eukaryotic translation initiation factor 1;Eukaryotic translation initiation factor 1b 0 ; 172.43 8.84E-06 4036500 5848.1 6001 5101.6 4421 5528.7 5082.7 6424.4 4629.8 6193.5 6275.4 FALSE TRUE 5350.688385 5610.333809 4755.317606 4761.506186 5308.480172 5370.478082 5995.839998 4589.322147 6837.336489 7052.843929 0.758656854 0.795471141 0.674241151 0.675118609 0.752672287 0.761462771 0.850130821 0.65070519 0.969443895 1 12.7839894 -8.322190876 7.484115855 0.988973075 0.742266904 0.74309872 0.057594829 0.1612772 17.31272164 0.055788871 0.014543226 4.76E-09 8.322190876 -0.246706171 GDDLLPAGTEDYIHIR ddPTM_A459_MK2206_30min_R2 1 GDDLLPAGTEDYIHIR 16 0 K7EM18;P41567;O60739 K7EM18 EIF1;EIF1B Eukaryotic translation initiation factor 1;Eukaryotic translation initiation factor 1b 0 157.37 0.00060058 0 27639 25317 24971 30702 27533 28070 26787 23632 23964 26408 FALSE TRUE 29755.06309 24059.79459 25803.52068 28193.54839 26451.91608 29138.22352 23269.83472 26720.78354 26048.3454 25546.30912 1.164749982 0.941810986 1.010068443 1.103625117 1.03544962 1.140604045 0.910888325 1.045974329 1.019652008 1 14.64082725 -7.258754646 24.99941945 0.997959863 1.058176303 0.203343109 0.068520939 464.6347484 4326574.965 0.026728306 0.019765633 5.51E-08 7.258754646 0.06021644 GDDWNDREWDR ddPTM_A459_MK2206_30min_R1 1 GDDWNDREWDR 11 1 C9JUL9;Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5 C9JUL9;Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 0 136.49 0.0039769 6552500 1818.7 1682.9 1993.3 1552.7 2036.3 2063.9 2222.4 1607.2 1300.3 966.89 FALSE TRUE 1664.010015 1573.342904 1858.00035 1672.289223 1955.189859 2180.756234 2074.147751 1593.14842 1435.470838 1086.675633 1.531284925 1.447849622 1.709802165 1.538903765 1.799239626 2.006814332 1.908709175 1.466075406 1.320974534 1 10.08570565 -8.363100373 1.888758778 1.022660814 1.700935539 0.629060989 0.171470297 0.231275195 1.652834579 0.182874034 0.052656221 4.33E-09 8.363100373 0.678274724 GDEASEEGQNGS(ph)SPK ddPTM_A459_MK2206_30min_R1 1 GDEASEEGQNGSSPK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 GDEASEEGQNGS(0.5)S(0.5)PK 251.05 4.24E-28 86966000 4776 6218.4 6722.7 5166.2 3408.4 2865.7 4436.8 4090.3 4120.4 5510.3 TRUE FALSE 4369.77612 5813.58103 6266.381855 5564.101619 3272.636211 3027.953458 4140.829167 4054.538938 4548.730325 6192.957565 0.705604079 0.938740653 1.011856094 0.898456281 0.528444798 0.48893496 0.668635159 0.654701554 0.734500483 1 12.59641285 -6.240716111 23.35238074 0.65189614 0.901040665 0.311022566 0.14899259 365.0669975 411380.9889 0.043488822 0.05605761 5.74E-07 6.240716111 0.249144525 GDEASEEGQNGSS(ph)PK ddPTM_A459_MK2206_30min_R1 2 GDEASEEGQNGSSPK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 GDEASEEGQNGS(0.462)S(0.538)PK;GDEASEEGQNGS(0.028)S(0.972)PK 218.78 2.70E-09 11479800 6128.1 7764.6 8061.8 6659.1 4371.5 4344 6111.2 5302.6 5563.8 7218.7 TRUE FALSE 5606.872915 7259.123129 7514.587477 7171.985036 4197.373898 4589.953526 5703.532999 5256.239927 6142.17692 8113.007054 0.691096763 0.894751241 0.926239485 0.884010699 0.517363521 0.565752439 0.703010975 0.647878141 0.757077725 1 12.98602103 -6.230163157 24.87646984 0.674494473 0.857806126 0.214458216 0.136138608 809.912279 644187.5344 0.03915587 0.050545105 5.89E-07 6.230163157 0.183311653 GDEASEEGQNGSS(ph)PK ddPTM_A459_MK2206_30min_R2 4 GDEASEEGQNGSSPK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 GDEASEEGQNGS(0.025)S(0.975)PK;GDEASEEGQNGS(0.095)S(0.905)PK;GDEASEEGQNGS(0.1)S(0.9)PK;GDEASEEGQNGS(0.493)S(0.507)PK 196.18 2.03E-05 264751400 184025 177478 190823 155875 146862 111870 193612 153639 125124 194788 TRUE FALSE 198114.0955 168664.7006 197184.9436 143139.5139 141095.46 116127.2912 168190.5118 173720.1448 136007.0593 188432.0835 1.051381972 0.89509545 1.046451007 0.759634512 0.748786817 0.616281947 0.892578953 0.921924449 0.721782919 1 17.5236851 -5.765179514 24.99504025 0.798439194 0.987388086 0.373683694 0.111295951 99.9051805 667665.5711 0.031271046 0.048470626 1.72E-06 5.765179514 0.188948891 GDEELDSLIK ddPTM_A459_MK2206_30min_R2 2 GDEELDSLIK 10 0 Q71UI9-3;Q71UI9-4;Q71UI9;P0C0S5;C9J386;C9J0D1;A0A494C189;Q71UI9-2 Q71UI9-3 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A 0 ; 155.42 0.0072813 7063000 54034 57608 59055 69888 57012 50485 65859 51979 47632 62046 FALSE TRUE 58170.88459 54747.27049 61023.86423 64177.92684 54773.42242 52406.24205 57211.63419 58772.83377 51774.94526 60021.4441 0.969168361 0.912128512 1.016701033 1.069249962 0.912564222 0.873125311 0.953186566 0.979197263 0.862607457 1 15.87319041 GDFS(ph)YIGNLMTK ddPTM_A459_MK2206_30min_R2 2 GDFSYIGNLMTK 12 0 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 GDFS(1)YIGNLMTK;GDFS(1)YIGNLMTK 137.8 0.0012942 3727700 35679.8 40497 39235.7 41229 46898 46293 50536 34829.2 31765.7 41794.1 TRUE FALSE 38411.47292 38485.97787 40543.79866 37860.45881 45056.54888 48054.71255 43900.5625 39381.49603 34528.62317 40430.36194 0.950065027 0.951907824 1.002805731 0.936436307 1.114423585 1.188579826 1.085831548 0.974057469 0.854027061 1 15.3031515 -1.562214141 16.91281859 1.011901262 0.005027418 0 0.093215077 0 0 0.023473771 0 0.027402227 1.562214141 -1.006873844 GDIFDGTSFSHLPPSSSDGQGVPLS(ph)PVSK ddPTM_A459_MK2206_30min_R2 3 GDIFDGTSFSHLPPSSSDGQGVPLSPVSK 29 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 GDIFDGTSFSHLPPS(0.002)S(0.002)S(0.002)DGQGVPLS(0.839)PVS(0.154)K;GDIFDGTSFSHLPPS(0.005)S(0.006)S(0.006)DGQGVPLS(0.877)PVS(0.107)K;GDIFDGTSFSHLPPS(0.001)S(0.001)S(0.001)DGQGVPLS(0.912)PVS(0.086)K 104.48 1.19E-07 16086200 49811.3 86133 65834 109093 90099 92545 91445 66506 81313 65299 TRUE FALSE 53624.89143 81855.76047 68028.8727 100179.7529 86561.26055 96066.86482 79438.16165 75198.56255 88385.45776 63168.29898 0.848920935 1.295836073 1.076946408 1.585918167 1.370327553 1.520808165 1.25756373 1.1904478 1.399205918 1 15.9469131 -4.332830412 1.417433017 1.330190479 2.08E-16 0.363107464 0.175158981 4.000321678 3.095753839 0.048515268 10.34241657 4.65E-05 4.332830412 -1.330190479 GDLAFGAPGPRPPS(ph)PFDDPADDPEHK ddPTM_A459_MK2206_30min_R1 2 GDLAFGAPGPRPPSPFDDPADDPEHK 26 1 Q7Z3Z5;Q93074-3;Q93074;Q93074-2 Q7Z3Z5 TNRC11;MED12 Mediator of RNA polymerase II transcription subunit 12 1 GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK 103.94 1.27E-07 42579000 11818.1 11876.2 11525 8834.4 9000.7 8722.5 11112 8462 11531.2 12268.5 TRUE FALSE 10812.90854 11103.05722 10742.71511 9514.827019 8642.18306 9216.360412 10370.73875 8388.017626 12729.9095 13788.4144 0.784202463 0.805245396 0.779111709 0.690059549 0.626771346 0.668413361 0.752134252 0.608338086 0.923232297 1 13.75116894 -8.428223894 5.037573802 0.997872682 0.716148493 0.710720839 0.06390994 0.116085518 4.343363596 0.066913201 0.017418958 3.73E-09 8.428223894 -0.281724189 GDLAFGAPGPRPPS(ph)PFDDPADDPEHK ddPTM_A459_MK2206_30min_R2 5 GDLAFGAPGPRPPSPFDDPADDPEHK 26 1 Q7Z3Z5;Q93074-3;Q93074;Q93074-2 Q7Z3Z5 TNRC11;MED12 Mediator of RNA polymerase II transcription subunit 12 1 GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK 88.684 2.51E-05 21721200 120794 132425 121665.3 118006.4 124402.7 104691 153507 107620.2 99213.7 141616 TRUE FALSE 130042.0815 125848.9671 125721.5604 108364.8996 119518.0249 108675.0894 133351.3465 121686.5297 107843.1283 136995.0815 0.949246353 0.918638579 0.91770857 0.791013067 0.872425664 0.793277307 0.973402439 0.888254734 0.787204381 1 17.06376457 -5.547503736 24.84752598 0.867415932 0.930000313 0.122564923 0.068948063 390.7495831 394278.7549 0.018173804 0.031479366 2.83E-06 5.547503736 0.06258438 GDLGIEIPAEK ddPTM_A459_MK2206_30min_R1 4 GDLGIEIPAEK 11 0 P14618;P14618-3;B4DNK4;P30613-2;P30613;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM;PKLR Pyruvate kinase PKM;Pyruvate kinase;Pyruvate kinase PKLR 0 ;;; 169.65 0.0056614 43350200 17998.6 19226.7 19404.2 19284.3 17835 17007.6 18932 17999 17295.4 17581.3 FALSE TRUE 16467.72456 17975.03834 18087.09697 20769.58013 17124.59418 17970.55561 17669.08082 17841.63664 19093.31872 19759.40418 0.833412 0.909695362 0.915366516 1.051123806 0.866655393 0.909468497 0.894211215 0.902944061 0.966290206 1 14.27025182 -14.52287875 0.199924563 1.376874628 0.904304223 0.198174484 0.054491586 264.9852764 2.614135231 39.81369026 0.135117489 3.00E-15 14.52287875 -0.472570405 GDLGIEIPAEK ddPTM_A459_MK2206_30min_R2 2 GDLGIEIPAEK 11 0 P14618;P14618-3;B4DNK4;P30613-2;P30613;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM;PKLR Pyruvate kinase PKM;Pyruvate kinase;Pyruvate kinase PKLR 0 ; 133.89 0.02401 29216000 105673 119396 102567 117704 109884 91790 122658 97319 98081 120712 FALSE TRUE 113763.4061 113466.9683 105986.5326 108087.2067 105569.402 95283.13277 106552.8573 110038.9274 106611.9081 116773.1773 0.974225492 0.971686914 0.907627377 0.925616731 0.904055233 0.81596763 0.91247716 0.942330507 0.912982849 1 16.8333494 -5.259354586 20.0065025 0.909414978 0.97295632 0.217174459 0.042826666 15.16205739 145440.1436 0.01116779 0.026549044 5.50E-06 5.259354586 0.063541342 GDLPSDS(ph)GFSDPESEAK ddPTM_A459_MK2206_30min_R2 1 GDLPSDSGFSDPESEAK 17 0 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L "Histone-lysine N-methyltransferase, H3 lysine-79 specific" 1 GDLPSDS(0.663)GFS(0.316)DPES(0.02)EAK 125.52 0.0012398 2045500 12824 12372 14045 12497 11322 12247 13915 11642 8371.9 16003 TRUE FALSE 13805.8153 11757.62447 14513.25329 11475.95512 10877.44139 12713.06817 12087.94379 13163.64937 9100.072729 15480.82342 0.891801096 0.759496065 0.937498794 0.741301339 0.702639717 0.821213951 0.780833387 0.850319716 0.587828727 1 13.91819459 -5.788904248 24.9976063 0.775309053 0.852588547 0.096216593 0.108282152 485.785658 442143.9269 0.028654339 0.042512661 1.63E-06 5.788904248 0.077279495 GDLQS(ph)LSWLTAVDVPR ddPTM_A459_MK2206_30min_R2 1 GDLQSLSWLTAVDVPR 16 0 A0A0C4DG65 A0A0C4DG65 FOXN4 1 GDLQS(0.333)LS(0.333)WLT(0.333)AVDVPR 84.403 0.041139 0 23976 24184 26040 26624 27547 25762 27500 24358 23757 22531 TRUE FALSE 25811.62099 22983.05773 26908.1606 24448.73403 26465.36637 26742.39096 23889.21697 27541.67423 25823.34092 21795.81532 1.184246637 1.054471117 1.234556277 1.121716884 1.214240715 1.226950705 1.096046035 1.263622114 1.184784352 1 14.41176355 -4.436988255 22.98049855 1.164265155 3.065449614 0.000218115 0.081952849 6903.22234 2036831.413 0.01851536 70625.48374 3.66E-05 4.436988255 1.901184459 GDLS(ph)DVEEEEEEEMDVDEATGAVK ddPTM_A459_MK2206_30min_R1 2 GDLSDVEEEEEEEMDVDEATGAVK 24 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 GDLS(1)DVEEEEEEEMDVDEATGAVK;GDLS(1)DVEEEEEEEMDVDEATGAVK 185.06 1.60E-21 7281600 2915.5 3015.35 3054.8 2420.25 3028.18 2795.66 2738.09 2876.53 2650.99 2808.8 TRUE FALSE 2667.521415 2819.050167 2847.448687 2606.658074 2907.561178 2953.947853 2555.437012 2851.380801 2926.569897 3156.775349 0.845014649 0.893015769 0.902011823 0.825734424 0.921054195 0.935748517 0.809508669 0.903257434 0.927075757 1 11.62423588 -8.561936641 1.97811772 0.999121269 0.87927022 0.485743836 0.038687092 0.321797232 2.868710484 0.03677208 0.010281988 2.74E-09 8.561936641 -0.119851049 GDLS(ph)DVEEEEEEEMDVDEATGAVKK ddPTM_A459_MK2206_30min_R1 1 GDLSDVEEEEEEEMDVDEATGAVKK 25 1 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 GDLS(1)DVEEEEEEEMDVDEATGAVKK 190.28 6.01E-27 11876000 5507.4 6138.1 5431.5 6064.7 5526.5 4579.6 4982.9 6219.5 4632 3579.1 TRUE FALSE 5038.966709 5738.508574 5062.824913 6531.804245 5306.367802 4838.892994 4650.499833 6165.123567 5113.512976 4022.505929 1.25269342 1.426600402 1.258624599 1.623814697 1.319169666 1.202954845 1.156120069 1.532657422 1.271225715 1 11.97387883 -6.518290772 24.73489718 1.261098655 1.394588037 0.171534492 0.157673786 361.0048044 1946281.278 0.050825614 0.052118571 3.03E-07 6.518290772 0.133489382 GDMEQNDSDNRR ddPTM_A459_MK2206_30min_R1 1 GDMEQNDSDNRR 12 1 Q9UN86-2;Q9UN86 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 0 111.5 0.0087783 0 318.08 336.4 528.3 396.19 438.63 289.57 358.23 361.41 119.07 278.56 FALSE TRUE 291.0256257 314.5002989 492.4404679 426.7046224 421.1584383 305.9652032 334.3331303 358.2502305 131.4477526 313.0701158 0.929586093 1.004568252 1.572939872 1.362968233 1.345252763 0.977305682 1.067917739 1.144313086 0.419866816 1 8.290341992 -8.144477972 7.191893009 0.713434161 1.187621612 0.395049298 0.230555048 0.250699103 13.62744206 0.164102027 0.061261514 7.17E-09 8.144477972 0.474187451 GDMEQNDSDNRR ddPTM_A459_MK2206_30min_R2 2 GDMEQNDSDNRR 12 1 Q9UN86-2;Q9UN86 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 0 ; 137.01 0.00184 32875000 58739 81357 73748 78787 89440 76426 75649 63264 78697 84983 FALSE TRUE 63236.103 77316.92968 76206.72151 72349.85007 85928.1362 79334.44498 65716.19543 71532.82202 85541.92281 82210.01167 0.769201971 0.940480704 0.926976167 0.880061304 1.04522715 0.965021697 0.799369737 0.870123 1.040529262 1 16.32702648 -4.760079251 24.85202421 0.934067076 0.769201758 0.324930681 0.073645338 41.67718809 761212.5606 0.018777223 0.113912602 1.74E-05 4.760079251 -0.164865318 GDMS(ph)DEDDENEFFDAPEIITMPENLGHK ddPTM_A459_MK2206_30min_R1 5 GDMSDEDDENEFFDAPEIITMPENLGHK 28 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(0.923)DEDDENEFFDAPEIIT(0.077)MPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK 99.954 8.96E-07 23115200 3082.81 2811.67 2814.78 2343.05 2600.43 2985.64 3114.35 2946.93 2844.72 2809.08 TRUE FALSE 2820.600821 2628.629772 2623.720576 2523.512117 2496.849367 3154.684357 2906.597394 2921.165302 3140.438824 3157.090038 0.893417922 0.832611595 0.83105662 0.799315853 0.790870497 0.999238007 0.920657111 0.925271458 0.994725772 1 11.62437969 -6.76098935 25 0.960350358 0.828044522 0.778252718 0.036855087 6.058171583 336551.348 0.012899629 0.012160156 1.73E-07 6.76098935 -0.132305836 GDMS(ph)DEDDENEFFDAPEIITMPENLGHK ddPTM_A459_MK2206_30min_R2 4 GDMSDEDDENEFFDAPEIITMPENLGHK 28 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 GDMS(0.999)DEDDENEFFDAPEIIT(0.001)MPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK 91.748 1.38E-05 5723700 19360 22982.2 21956.8 22321.4 20958.5 20449.7 22211.5 19824.4 20399.6 24334.3 TRUE FALSE 20842.21649 21840.93737 22688.82875 20497.67022 20135.56398 21227.92766 19295.10337 22415.51715 22173.92033 23540.27378 0.885385475 0.927811527 0.963830283 0.870749015 0.855366601 0.901770636 0.819663507 0.9522199 0.941956773 1 14.52284348 -8.298171859 1.885014943 0.991500459 0.892976205 0.410716715 0.040214246 0.343605673 2.317924941 0.039462308 0.011518671 5.03E-09 8.298171859 -0.098524253 GDPEWS(ph)SETDALVGSR ddPTM_A459_MK2206_30min_R1 3 GDPEWSSETDALVGSR 16 0 Q7Z7N9 Q7Z7N9 TMEM179B Transmembrane protein 179B 1 GDPEWS(0.935)S(0.046)ET(0.019)DALVGSR;GDPEWS(0.865)S(0.108)ET(0.027)DALVGSR;GDPEWS(0.946)S(0.041)ET(0.012)DALVGSR 287.43 1.82E-74 14099000 2888.68 2554.32 2058.97 2656.75 3238.5 2312.68 3306.64 3056.83 2801.62 2775.26 TRUE FALSE 2642.982597 2388.033304 1919.212853 2861.373345 3109.503687 2443.621943 3086.060079 3030.104458 3092.858425 3119.080161 0.847359625 0.76562101 0.615313732 0.917377303 0.996929712 0.783443136 0.989413519 0.971473736 0.991593119 1 11.60690492 -5.899769592 7.735856229 0.947979141 0.745847398 0.586614524 0.080091824 0.170295768 11.62609115 0.022885696 0.034084528 1.26E-06 5.899769592 -0.202131744 GDPEWS(ph)SETDALVGSR ddPTM_A459_MK2206_30min_R2 3 GDPEWSSETDALVGSR 16 0 Q7Z7N9 Q7Z7N9 TMEM179B Transmembrane protein 179B 1 GDPEWS(0.935)S(0.061)ET(0.004)DALVGSR;GDPEWS(0.667)S(0.222)ET(0.109)DALVGS(0.002)R;GDPEWS(0.992)S(0.004)ET(0.004)DALVGSR 205.66 9.92E-08 4608600 7849 9699.8 9941.5 7526.1 9399.4 10564 12560 4642.51 12235.9 10901 TRUE FALSE 8449.925475 9218.122037 10272.94465 6911.193555 9030.332328 10966.02042 10910.85691 5249.301997 13300.15646 10545.30126 0.801297684 0.874144968 0.974172704 0.655381329 0.856337065 1.039896362 1.034665264 0.497785873 1.261240066 1 13.36431269 -6.543899275 23.7625659 0.940524915 0.829689117 0.101618847 0.193698619 400.2384398 452442.5467 0.062201471 0.062208919 2.86E-07 6.543899275 -0.110835798 GDPPRLS(ph)PDPVAGSAVSQELR ddPTM_A459_MK2206_30min_R1 1 GDPPRLSPDPVAGSAVSQELR 21 1 E9PMR3;E9PMG4;Q9BUR4 E9PMR3 WRAP53 Telomerase Cajal body protein 1 1 GDPPRLS(0.999)PDPVAGSAVSQELR 52.866 0.023893 17600000 4082.1 2660.3 3443.3 2477.4 4075.7 5067.3 4394.9 3520.3 2853.4 3212.2 TRUE FALSE 3734.895959 2487.113986 3209.57839 2668.209777 3913.356239 5354.206147 4101.72424 3489.522388 3150.021141 3610.151587 1.034553777 0.688922314 0.889042555 0.739085247 1.083986682 1.483097321 1.136163992 0.966586113 0.872545395 1 11.8178437 -6.318547339 7.506489744 1.111584224 0.831174746 0.331373553 0.174145402 0.330679076 38.83587572 0.0575896 0.0655189 4.80E-07 6.318547339 -0.280409477 GDPPRLS(ph)PDPVAGSAVSQELR ddPTM_A459_MK2206_30min_R2 3 GDPPRLSPDPVAGSAVSQELR 21 1 E9PMR3;E9PMG4;Q9BUR4 E9PMR3 WRAP53 Telomerase Cajal body protein 1 1 GDPPRLS(1)PDPVAGSAVSQELR;GDPPRLS(0.998)PDPVAGS(0.001)AVSQELR;GDPPRLS(1)PDPVAGSAVSQELR 85.163 0.0020006 155281000 373022 382870.5 366608.5 433860.1 359529.8 410668.3 364909 345450.7 356450.4 381698.8 TRUE FALSE 401580.8511 363857.7077 378831.0444 398412.342 345412.8536 426296.5699 316996.01 390602.2926 387453.8115 369243.9994 1.087575835 0.985412649 1.025963983 1.078994764 0.935459626 1.154511842 0.858500099 1.057843305 1.049316474 1 18.49421495 -4.743769518 23.8846555 1.017165062 1.087576217 0.072398644 0.076554628 1804.947944 2439548.346 0.017698204 0.504394524 1.80E-05 4.743769518 0.070411155 GDQCCYSHS(ph)PPTPR ddPTM_A459_MK2206_30min_R1 2 GDQCCYSHSPPTPR 14 0 Q9NXH9-2;Q9NXH9 Q9NXH9-2 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase 1 GDQCCYS(0.006)HS(0.904)PPT(0.091)PR;GDQCCYS(0.027)HS(0.96)PPT(0.013)PR 108.66 0.0048167 10386200 6513.5 3237.1 3987.1 6165.4 4890.1 6611.5 4520.8 4031.1 2923.65 3210.6 TRUE FALSE 5959.492621 3026.364202 3716.466761 6640.260176 4695.316962 6985.837416 4219.225681 3995.856518 3227.57388 3608.353367 1.651582319 0.838710596 1.029961975 1.840246645 1.301235352 1.936018096 1.169293928 1.107390577 0.894472784 1 11.81712491 -7.512684793 23.26136815 1.028227084 1.412863794 0.27110478 0.320470515 311.2839613 710324.3732 0.148934465 0.092868051 3.07E-08 7.512684793 0.38463671 GDQCCYSHS(ph)PPTPR ddPTM_A459_MK2206_30min_R2 4 GDQCCYSHSPPTPR 14 0 Q9NXH9-2;Q9NXH9 Q9NXH9-2 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase 1 GDQCCYS(0.015)HS(0.906)PPT(0.078)PR;GDQCCYSHS(1)PPTPR;GDQCCYSHS(0.984)PPT(0.016)PR;GDQCCYS(0.001)HS(0.5)PPT(0.5)PR 125.73 0.00089676 30592600 38101.2 47571.8 47370.6 53241.8 50529.5 60132 51164.8 40895.8 43766.2 49960.6 TRUE FALSE 41018.25717 45209.45359 48949.91216 48891.77463 48545.45794 62420.3654 44446.8003 46241.02148 47572.90496 48330.38971 0.848705285 0.935424975 1.012818486 1.011615568 1.004449958 1.291534493 0.91964498 0.956769059 0.984326947 1 15.56064301 -4.898293381 1.506885002 1.028801431 0.801943921 0.256943035 0.094751226 1.302356284 3.296487254 0.028534691 0.416139663 1.26E-05 4.898293381 -0.22685751 GDQPAASGDS(ph)DDDEPPPLPR ddPTM_A459_MK2206_30min_R1 1 GDQPAASGDSDDDEPPPLPR 20 0 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 GDQPAAS(0.001)GDS(0.999)DDDEPPPLPR 224.1 5.15E-20 8671100 4112.9 3768.1 3495.6 3170.7 3341.6 3929.7 4326.7 3398.7 3839.7 3579.9 TRUE FALSE 3763.076257 3522.796005 3258.328411 3414.907863 3208.496996 4152.196218 4038.073738 3368.985524 4238.850556 4023.405039 0.935296402 0.87557578 0.809843498 0.848760647 0.797458114 1.032010493 1.003645842 0.837346847 1.053548056 1 11.97420127 -6.76109438 24.99999901 0.976290402 0.851943512 0.506735323 0.064766248 8.532826651 618338.9392 0.022277473 0.020972053 1.73E-07 6.76109438 -0.12434689 GDQPAASGDS(ph)DDDEPPPLPR ddPTM_A459_MK2206_30min_R2 3 GDQPAASGDSDDDEPPPLPR 20 0 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 GDQPAAS(0.001)GDS(0.999)DDDEPPPLPR;GDQPAAS(0.002)GDS(0.998)DDDEPPPLPR;GDQPAAS(0.006)GDS(0.994)DDDEPPPLPR 235.21 9.79E-25 70047400 237617 122805 148623 118733 108699 139698 223296 132953 162716 144552 TRUE FALSE 255809.1402 116706.6823 153578.0166 109032.1341 104430.9311 145014.3053 193976.967 150330.4136 176868.7436 139835.2801 1.829360517 0.834601126 1.098278035 0.779718352 0.746813902 1.037036613 1.387181882 1.075053545 1.264836338 1 17.09336887 -4.75306562 24.99984374 1.024832549 1.829362012 0.610828652 0.192651078 235.1810785 702078.8663 0.051947168 0.581516992 1.77E-05 4.75306562 0.804529463 GDQVLNFS(ph)DAEDLIDDSK ddPTM_A459_MK2206_30min_R1 5 GDQVLNFSDAEDLIDDSK 18 0 F8W126;Q96EZ8-3;Q96EZ8;Q96EZ8-2;Q96EZ8-4 F8W126 MCRS1 Microspherule protein 1 1 GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK 240.44 4.78E-25 54604700 12655.16 14030.49 13919.7 12187.12 10121.76 10518.93 12540.33 11010.95 12158.54 11838.57 TRUE FALSE 11578.77219 13117.10255 12974.86955 13125.77409 9718.588866 11114.50273 11703.78747 10914.68243 13422.46374 13305.22143 0.870242728 0.985861274 0.97517126 0.986513014 0.730434207 0.835348948 0.879638684 0.820330761 1.008811752 1 13.6997049 GDQVLNFS(ph)DAEDLIDDSK ddPTM_A459_MK2206_30min_R2 3 GDQVLNFSDAEDLIDDSK 18 0 F8W126;Q96EZ8-3;Q96EZ8;Q96EZ8-2;Q96EZ8-4 F8W126 MCRS1 Microspherule protein 1 1 GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK 114.1 0.0011186 22182300 96245 102944 103055 103301 101660 75445 125879 87754 75079 104518 TRUE FALSE 103613.5912 97831.95065 106490.8023 94860.97786 97668.3176 78316.11234 109350.9361 99223.7491 81609.23571 101107.5862 1.024785529 0.967602475 1.053242454 0.938218203 0.96598407 0.77458196 1.081530478 0.981367994 0.807152448 1 16.62553172 -5.811998665 12.25198833 0.935381839 1.010427277 0.150617446 0.086467748 1.717504516 412.9984654 0.024236427 0.035982984 1.54E-06 5.811998665 0.075045438 GDQVLNFSDAEDLIDDS(ph)K ddPTM_A459_MK2206_30min_R1 1 GDQVLNFSDAEDLIDDSK 18 0 F8W126;Q96EZ8-3;Q96EZ8;Q96EZ8-2;Q96EZ8-4 F8W126 MCRS1 Microspherule protein 1 1 GDQVLNFS(0.006)DAEDLIDDS(0.994)K 139.48 0.0003261 31958000 2084.7 2647.6 2472.4 1854.1 1818 1670.4 2139 1930.8 2257.6 2195 TRUE FALSE 1907.385318 2475.240759 2304.580377 1996.903103 1745.58521 1764.976604 1996.311213 1913.919219 2492.285599 2466.933171 0.773180782 1.003367577 0.93418841 0.809467855 0.70759323 0.715453756 0.809227926 0.775829374 1.010276901 1 11.26850292 -10.59342496 7.515962877 1.000000017 0.834437811 0.179439229 0.103971148 3.18E-08 3.94E-09 0.107472141 0.02606582 2.55E-11 10.59342496 -0.165562207 GDREEEVERPVS(ph)SPGDPEQK ddPTM_A459_MK2206_30min_R1 3 GDREEEVERPVSSPGDPEQK 20 2 O43149 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 GDREEEVERPVS(0.5)S(0.5)PGDPEQK;GDREEEVERPVS(0.5)S(0.5)PGDPEQK;GDREEEVERPVS(0.5)S(0.5)PGDPEQK 80.453 0.0046257 31781300 6807 7336.3 7259.3 5739.5 5955.4 5537.4 7127.6 6173.7 7214.1 7409.2 TRUE FALSE 6228.028905 6858.705537 6766.558942 6181.557284 5718.183807 5850.922803 6652.130809 6119.723992 7964.031511 8327.107633 0.747922229 0.823660008 0.812594149 0.742341466 0.686695076 0.702635664 0.798852507 0.734915923 0.956398291 1 13.02359976 -8.328208704 4.385041546 0.994251088 0.756952687 0.810693803 0.043020783 0.099579435 3.604249893 0.045017867 0.01206949 4.70E-09 8.328208704 -0.237298402 GDRS(ph)PEPGQTWTR ddPTM_A459_MK2206_30min_R1 2 GDRSPEPGQTWTR 13 1 Q09666;E9PKR9;E9PLK4;E9PJZ0;E9PJC6;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GDRS(1)PEPGQTWTR;GDRS(1)PEPGQTWTR 205.26 0.00010958 22483000 6139.8 6496.9 6206.9 4883.2 5811.4 6545.4 7185.1 6207.4 5739.7 6658 TRUE FALSE 5617.577769 6073.950629 5785.592921 5259.30491 5579.919632 6915.994892 6705.795089 6153.129356 6336.362355 7482.843305 0.750727703 0.811716934 0.773181087 0.702848462 0.745695106 0.924246922 0.896156022 0.822298304 0.846785386 1 12.86937085 -6.754482686 24.99986686 0.886682142 0.75779189 0.650062524 0.051418478 115.2651787 414221.5267 0.017557757 0.017193357 1.76E-07 6.754482686 -0.128890253 GDRS(ph)PEPGQTWTR ddPTM_A459_MK2206_30min_R2 2 GDRSPEPGQTWTR 13 1 Q09666;E9PKR9;E9PLK4;E9PJZ0;E9PJC6;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GDRS(0.999)PEPGQT(0.001)WTR;GDRS(0.997)PEPGQT(0.003)WTR 73.593 0.028258 33240300 31439 36716 32250 44042 31029.7 41785 40822 33001 29268.8 30030.6 TRUE FALSE 33845.99401 34892.73683 33325.1989 40443.62772 29811.31807 43375.15746 35462.02236 37314.34401 31814.54732 29050.70398 1.165066225 1.201097807 1.147139117 1.392173757 1.026182294 1.493084556 1.22069408 1.284455758 1.095138601 1 14.8262855 -8.461261101 3.674826662 1.001312804 1.241916139 0.297327254 0.123070115 0.245032225 6.710092789 0.111845581 0.029492906 3.46E-09 8.461261101 0.240603335 GDRSEDFGVNEDLADSDAR ddPTM_A459_MK2206_30min_R1 7 GDRSEDFGVNEDLADSDAR 19 1 P04083 P04083 ANXA1 Annexin A1 0 ;;;;;; 354.39 7.02E-193 240081600 16211.7 17065 17816.6 16919.7 20876.8 15548.8 15298.5 17631 11301.3 7469.2 FALSE TRUE 14832.80978 15954.0654 16607.25883 18222.85823 20045.23285 16429.15962 14277.96498 17476.85403 12476.11058 8394.540886 1.766959026 1.900528643 1.978340335 2.170798674 2.38788912 1.95712426 1.700863117 2.081930896 1.486217144 1 13.03523571 -8.51150457 2.54945543 1.000020644 2.000114191 0.742254798 0.187226981 0.144053082 2.196988157 0.195294209 0.05298244 3.08E-09 8.51150457 1.000093547 GDRSEDFGVNEDLADSDAR ddPTM_A459_MK2206_30min_R2 4 GDRSEDFGVNEDLADSDAR 19 1 P04083 P04083 ANXA1 Annexin A1 0 ;;; 337.03 3.66E-154 79311000 129927.2 268793 198855 307155 269010 267098 256476 183352 322900 197284 FALSE TRUE 139874.5263 255445.1305 205484.7265 282059.454 258447.3157 277262.6016 222800.3931 207316.7359 350985.2583 190846.6392 0.732915847 1.338483777 1.076700786 1.477937757 1.354214655 1.452803165 1.167431578 1.086300166 1.83909583 1 17.54205426 -4.759867019 24.9601893 1.312321632 0.732915119 0.352038627 0.23499684 43.14681077 684701.4594 0.055227686 0.340546931 1.74E-05 4.759867019 -0.579406513 GDS(ph)ETDLEALFNAVMNPK ddPTM_A459_MK2206_30min_R1 4 GDSETDLEALFNAVMNPK 18 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 GDS(0.758)ET(0.242)DLEALFNAVMNPK;GDS(0.979)ET(0.021)DLEALFNAVMNPK;GDS(0.847)ET(0.153)DLEALFNAVMNPK;GDS(0.959)ET(0.041)DLEALFNAVMNPK 228.38 1.88E-18 36140800 3827.57 2989.75 3190.76 3078.16 3150.55 2399.31 3517.02 3214.35 3127.55 2839.95 TRUE FALSE 3502.015072 2795.116732 2974.180101 3315.240417 3025.056922 2535.156859 3282.406013 3186.247277 3452.670015 3191.784447 1.097196609 0.875722273 0.931823609 1.038679294 0.947763539 0.79427571 1.028392132 0.998265181 1.081736587 1 11.64014751 -7.420262275 22.79408889 1.027013785 0.944709676 0.190681349 0.080125812 29.76690133 6597.670757 0.033491776 0.022580128 3.80E-08 7.420262275 -0.082304109 GDS(ph)LILEHQWELEK ddPTM_A459_MK2206_30min_R1 4 GDSLILEHQWELEK 14 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK 122.46 0.0011711 21843600 9545.8 10277.4 10500.6 7255.2 8588.1 8175.6 11116.6 10268 11556.4 12922.6 TRUE FALSE 8733.879583 9608.339392 9787.848528 7813.996761 8246.017791 8638.495407 10375.0319 10178.22796 12757.72913 14523.54925 0.601359863 0.66156965 0.673929517 0.538022533 0.567768777 0.59479231 0.71435926 0.700808582 0.878416764 1 13.82610644 -8.282715076 1.110166378 1.001491442 0.609319738 0.894942644 0.044470276 0.149350322 0.376462362 0.045451594 0.01506547 5.22E-09 8.282715076 -0.392171704 GDS(ph)LILEHQWELEK ddPTM_A459_MK2206_30min_R2 2 GDSLILEHQWELEK 14 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK 114.96 0.001896 5238000 27142 30186 31319 30776 29876 26003 33230 23638.7 28461 35048 TRUE FALSE 29220.01239 28687.00713 32363.15983 28261.50235 28702.91813 26992.56239 28866.86108 26728.35925 30936.48633 33904.38663 0.861835747 0.846114913 0.954541965 0.833564773 0.846584203 0.796137759 0.851419653 0.788345164 0.912462646 1 15.04918432 -8.539537448 8.318356748 0.99999859 0.848853694 0.558286351 0.042464547 0.209323775 99.7527137 0.042302446 0.010932363 2.89E-09 8.539537448 -0.151144897 GDS(ph)LKEPTSIAESSR ddPTM_A459_MK2206_30min_R1 3 GDSLKEPTSIAESSR 15 1 Q9C0B5-2;Q9C0B5;H0YEF4 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 GDS(1)LKEPTSIAESSR;GDS(1)LKEPTSIAESSR;GDS(0.997)LKEPT(0.003)SIAESSR 149.19 0.0013765 43282700 5339.8 5313.8 4740.9 3984.9 4964.7 4474.7 5215.9 5064.7 6452.6 5837.3 TRUE FALSE 4885.62197 4967.870654 4419.100917 4291.817688 4766.945486 4728.053647 4867.956828 5020.419862 7123.370861 6560.468793 0.744706228 0.757243241 0.673595296 0.654193751 0.726616593 0.720688383 0.742013564 0.765253219 1.08580211 1 12.67958319 -8.18981313 4.481785654 1.043519927 0.717691004 0.923577483 0.036920234 0.053364352 1.991993915 0.029916632 0.010188763 6.46E-09 8.18981313 -0.325828924 GDS(ph)LKEPTSIAESSR ddPTM_A459_MK2206_30min_R2 1 GDSLKEPTSIAESSR 15 1 Q9C0B5-2;Q9C0B5;H0YEF4 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 GDS(0.998)LKEPT(0.001)SIAESSR 109.42 0.017805 15675000 33559 19427 22245 20155 18835 22197 38376 20111 25525 35321 TRUE FALSE 36128.30284 18462.28343 22986.6372 18508.27203 18095.44326 23041.72239 33337.1851 22739.57675 27745.11836 34168.47866 1.057357666 0.540330859 0.672743947 0.541676795 0.529594643 0.674356111 0.975670747 0.665513293 0.812009181 1 15.06037839 -7.096151985 8.662333238 0.834916449 0.649277503 0.232695636 0.167675449 0.54127566 44.71220824 0.062959672 0.048775694 8.01E-08 7.096151985 -0.185638946 GDS(ph)VSDSGSDALR ddPTM_A459_MK2206_30min_R2 1 GDSVSDSGSDALR 13 0 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 GDS(0.328)VS(0.328)DS(0.049)GS(0.294)DALR 182.72 0.00011855 8565400 14146 14753 13876 15633 13005 17063 19768 18007 21320 22877 TRUE FALSE 15229.02864 14020.38747 14338.61891 14355.73389 12494.35836 17712.34442 17172.43785 20360.57673 23174.37506 22130.52536 0.688145825 0.633531615 0.647911366 0.648684731 0.564575768 0.800358063 0.775961599 0.920022295 1.047167868 1 14.43375008 -7.598263004 1.140462044 1.030219699 0.641340212 0.898190634 0.050476769 0.142654516 0.341966724 0.040128343 0.017537721 2.52E-08 7.598263004 -0.388879487 GDSET(ph)DLEALFNAVMNPK ddPTM_A459_MK2206_30min_R2 1 GDSETDLEALFNAVMNPK 18 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 GDS(0.348)ET(0.652)DLEALFNAVMNPK 135.23 0.0019072 0 4872.2 6328.9 6652.5 8013.8 5121 5570.4 7557.4 5944.8 5080.1 5751.3 TRUE FALSE 5245.219378 6014.616029 6874.29103 7359.046905 4919.923809 5782.385475 6565.104302 6721.805772 5521.957915 5563.635552 0.942768326 1.081058594 1.235575365 1.322704702 0.88430016 1.039317802 1.180002579 1.20816788 0.99250892 1 12.4418122 -6.258243511 24.99646825 1.06701902 1.147353906 0.109923492 0.127148103 828.4941316 6480049.586 0.041039921 0.050844587 5.52E-07 6.258243511 0.080334886 GDSSS(ph)LVAELQEK ddPTM_A459_MK2206_30min_R2 1 GDSSSLVAELQEK 13 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 GDS(0.122)S(0.197)S(0.681)LVAELQEK 89.26 0.0297 0 29859 17075 13541 18936 15053 13461 14830 11208 10678 15100 TRUE FALSE 32145.028 16227.08033 13992.45018 17388.86823 14461.94358 13973.26779 12882.80319 12672.92408 11606.75314 14607.28824 2.200615712 1.110889309 0.957908816 1.190424119 0.990049854 0.956595609 0.881943519 0.86757541 0.794586439 1 13.83440075 -4.751733608 3.507723133 0.959640215 2.397553509 0.933687844 0.09896943 0.08396017 1.623872759 0.027931603 0.336302255 1.77E-05 4.751733608 1.437913294 up GDTGGEDTAAPGRFS(ph)FSPEPTLEDIRR ddPTM_A459_MK2206_30min_R1 2 GDTGGEDTAAPGRFSFSPEPTLEDIRR 27 2 Q9H773 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 GDTGGEDT(0.001)AAPGRFS(0.944)FS(0.052)PEPT(0.003)LEDIRR;GDTGGEDTAAPGRFS(0.944)FS(0.056)PEPTLEDIRR 93.729 2.82E-06 8484400 2189 1832.65 1964.71 1929.45 2208.1 1674.16 1713.98 1918.8 1753.82 1455.98 TRUE FALSE 2002.814055 1713.344152 1831.350959 2078.056573 2120.146701 1768.949492 1599.643522 1902.024134 1936.135865 1636.357794 1.223946292 1.047047386 1.119162915 1.269927995 1.295649832 1.081028549 0.97756342 1.162352231 1.183198364 1 10.67627252 GDTPGHAT(ph)PGHGGATSSAR ddPTM_A459_MK2206_30min_R1 2 GDTPGHATPGHGGATSSAR 19 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 GDT(0.231)PGHAT(0.768)PGHGGATSSAR;GDTPGHAT(1)PGHGGATSSAR 91.774 0.0032506 13670300 1448.54 1516.73 1579.49 859.2 1450.61 1789.27 2233 1841.01 1175.26 1384.45 TRUE FALSE 1325.334066 1417.990601 1472.27862 925.3757329 1392.829132 1890.576921 2084.040644 1824.914244 1297.432483 1555.966118 0.85177566 0.911324858 0.946215089 0.594727431 0.895153896 1.215050186 1.339386906 1.172849603 0.83384366 1 10.60359493 -6.657316567 5.579830877 1.136127525 0.83022239 0.440240853 0.153536512 0.195508476 8.994406919 0.053586908 0.053320898 2.20E-07 6.657316567 -0.305905135 GDTPGHAT(ph)PGHGGATSSAR ddPTM_A459_MK2206_30min_R2 1 GDTPGHATPGHGGATSSAR 19 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 GDTPGHAT(0.999)PGHGGATSSAR 79.237 0.0095367 2615000 5304.5 5743.4 4913.3 5591.4 5685.1 6602.7 6319.3 5977.4 5785.1 7134.1 TRUE FALSE 5710.616598 5458.191108 5077.10697 5134.564734 5461.874409 6853.970375 5489.568319 6758.666703 6288.277541 6901.314901 0.827467907 0.790891473 0.735672411 0.743998036 0.791425183 0.993139782 0.795438029 0.979330287 0.911170933 1 12.75265555 -6.667145037 6.825489733 0.925368711 0.772658853 0.633438339 0.05984533 0.147498137 9.067275567 0.019319103 0.019262036 2.15E-07 6.667145037 -0.152709858 GDTPGHATPGHGGATSSAR ddPTM_A459_MK2206_30min_R1 4 GDTPGHATPGHGGATSSAR 19 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 0 ;;; 127.88 0.00019149 1847360 1167.3 629.321 727.21 662.086 1478.33 1679.19 1786.78 1418.71 473.904 491.25 FALSE TRUE 1068.015005 588.3520885 677.8490113 713.0799784 1419.444986 1774.264287 1667.587166 1406.306368 523.1680167 552.1097587 1.934425154 1.065643342 1.227743217 1.291554745 2.570947105 3.213607908 3.020390674 2.547149993 0.947579731 1 9.108811291 -6.256924337 24.5995555 2.384008752 1.346534645 0.212883606 0.746675017 400.1116161 2179947.075 0.22708261 0.283138819 5.53E-07 6.256924337 -1.037474108 GDTPGHATPGHGGATSSAR ddPTM_A459_MK2206_30min_R2 4 GDTPGHATPGHGGATSSAR 19 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 0 ;;; 152.68 8.84E-06 1767320 981.95 7805.02 3069.56 14194 10916.75 18486.5 15456.5 7966.41 13789.1 7037.63 FALSE TRUE 1057.128847 7417.434056 3171.897598 13034.3048 10488.10354 19190.01671 13427.04298 9007.64714 14988.45099 6807.992709 0.155277611 1.089518508 0.465907902 1.914559159 1.540557399 2.818748129 1.972246969 1.323098823 2.201596217 1 12.73301378 -5.764651092 24.99251126 1.873628109 0.622162912 0.552950858 0.514808691 59.02469048 459316.9011 0.140702083 0.218918022 1.72E-06 5.764651092 -1.251465197 GDTSHS(ph)PTPGK ddPTM_A459_MK2206_30min_R2 2 GDTSHSPTPGK 11 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 GDT(0.002)S(0.023)HS(0.962)PT(0.013)PGK;GDTS(0.001)HS(0.967)PT(0.031)PGK 85.973 0.034119 5598700 44364 25741 29116 34836 43289 29473 37482 91896 61910 47374 TRUE FALSE 47760.54195 24462.73937 30086.71291 31989.78737 41589.25635 30594.61567 32560.56838 103907.1227 67294.81989 45828.19026 1.042165132 0.533792394 0.656511041 0.698037326 0.90750379 0.6675938 0.710492127 2.267318917 1.46841539 1 15.48394769 -7.734709092 24.98203158 1.650900321 0.735066013 0.587126032 0.318464828 121.2398179 113310.4225 0.139966707 0.080781139 1.84E-08 7.734709092 -0.915834308 GDTVS(ph)ASPCSAPLAR ddPTM_A459_MK2206_30min_R1 1 GDTVSASPCSAPLAR 15 0 Q15477 Q15477 SKIV2L Helicase SKI2W 1 GDT(0.337)VS(0.542)AS(0.122)PCSAPLAR 145.7 0.00035776 28909000 4146.9 3318.1 4308.5 3139 4138.9 3473.3 4225.8 3769.1 3078.2 3160.4 TRUE FALSE 3794.184379 3102.091087 4016.051024 3380.766324 3974.038849 3669.955244 3943.904592 3736.147156 3398.189905 3551.934212 1.068202324 0.87335263 1.130665937 0.95180995 1.118837966 1.033227257 1.110354065 1.051862713 0.956715328 1 11.79438915 -4.445040357 23.24400334 1.029964427 3.533125266 0.023046421 0.07867061 3684.075951 1222786.529 0.018006081 54185.11699 3.59E-05 4.445040357 2.503160839 GDTVSAS(ph)PCSAPLAR ddPTM_A459_MK2206_30min_R1 3 GDTVSASPCSAPLAR 15 0 Q15477 Q15477 SKIV2L Helicase SKI2W 1 GDTVS(0.022)AS(0.976)PCS(0.002)APLAR;GDTVS(0.002)AS(0.979)PCS(0.019)APLAR;GDTVS(0.002)AS(0.998)PCSAPLAR 257.81 3.08E-36 23130000 6564 5836.3 6019.1 5484 7454.2 6802.4 6698.9 6162.6 5165.7 5228 TRUE FALSE 6005.697331 5456.355809 5610.540262 5906.37863 7157.283429 7187.546009 6252.028604 6108.721038 5702.693001 5875.684109 1.022127333 0.92863328 0.954874387 1.005223991 1.218119166 1.223269644 1.064051179 1.039661242 0.970558133 1 12.52054112 -6.015833063 23.61693447 1.09533198 0.967136345 0.305990347 0.08052081 414.4953385 618272.5543 0.025651552 0.03421551 9.64E-07 6.015833063 -0.128195635 GDTVSAS(ph)PCSAPLAR ddPTM_A459_MK2206_30min_R2 4 GDTVSASPCSAPLAR 15 0 Q15477 Q15477 SKIV2L Helicase SKI2W 1 GDTVS(0.174)AS(0.823)PCS(0.003)APLAR;GDTVS(0.006)AS(0.974)PCS(0.019)APLAR;GDT(0.199)VS(0.236)AS(0.555)PCS(0.01)APLAR;GDT(0.001)VS(0.002)AS(0.995)PCS(0.002)APLAR 198.87 2.06E-05 77947800 191158 206735 173298 223234 218198 254636 235210 178854 190851 184899 TRUE FALSE 205793.2035 196468.8405 179075.6688 204995.0681 209630.4502 264326.3514 204326.6445 202230.8319 207450.875 178865.7608 1.150545541 1.098415033 1.001173551 1.146083338 1.171998762 1.477791782 1.142346325 1.130629088 1.159813226 1 17.44851772 -6.06717357 3.7250518 1.19893689 1.083501691 0.10441476 0.118101944 0.456909927 12.37382367 0.036584139 0.050255387 8.57E-07 6.06717357 -0.1154352 GDVEEDETIPDSEQDIRPR ddPTM_A459_MK2206_30min_R1 2 GDVEEDETIPDSEQDIRPR 19 1 Q92973-3;Q92973-2;Q92973 Q92973-3 TNPO1 Transportin-1 0 ; 169.15 1.29E-08 7160100 2304.88 2260.16 2672.03 2207.72 2487.8 2543.3 3066.4 2318.54 1999.2 2230.43 FALSE TRUE 2108.837853 2113.023173 2490.660048 2377.758977 2388.705658 2687.299448 2861.846051 2298.269249 2207.023994 2506.752507 0.841262888 0.842932506 0.993580356 0.948541577 0.952908455 1.072024239 1.141654807 0.916831336 0.88043155 1 11.29160385 -5.260591468 23.01609161 0.991067057 0.842097648 0.40394764 0.070946386 25.154654 682704.3607 0.020124602 0.047265021 5.49E-06 5.260591468 -0.148969409 GDVEEDETIPDSEQDIRPR ddPTM_A459_MK2206_30min_R2 3 GDVEEDETIPDSEQDIRPR 19 1 Q92973-3;Q92973-2;Q92973 Q92973-3 TNPO1 Transportin-1 0 ;; 285.18 8.75E-72 31590000 85350 93116 94064 116668 118150 121507 118382 88317 104185 113200 FALSE TRUE 91884.46162 88491.99484 97200.04681 107135.8512 113510.8373 126131.034 102838.3012 99860.33514 113246.823 109506.2933 0.839079279 0.808099628 0.887620646 0.978353371 1.036569077 1.151815391 0.939108595 0.911914121 1.034158125 1 16.74065426 -5.677325516 2.445265905 1.010928159 0.824871504 0.613913288 0.060803572 0.206858173 2.502873853 0.019482946 0.038645592 2.10E-06 5.677325516 -0.186056655 GDVEGSQS(ph)QDEGEGSGESER ddPTM_A459_MK2206_30min_R1 2 GDVEGSQSQDEGEGSGESER 20 0 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 GDVEGSQS(1)QDEGEGSGESER;GDVEGSQS(1)QDEGEGSGESER 270.73 5.31E-59 12759700 2382.5 2470.1 2446.4 2219.59 3073.7 2757 3116.7 2733 2392.7 2410.3 TRUE FALSE 2179.855864 2309.296041 2280.345184 2390.543206 2951.26802 2913.098957 2908.79063 2709.105669 2641.429727 2708.906161 0.804699659 0.852482849 0.841795562 0.882475459 1.089468533 1.07537832 1.07378789 1.000073649 0.975090893 1 11.4034947 -6.131002346 4.39685462 1.039059822 0.838590808 0.863409664 0.037346697 0.086305706 2.68935486 0.012328064 0.016260007 7.40E-07 6.131002346 -0.200469014 GDVTAEEAAGAS(ph)PAK ddPTM_A459_MK2206_30min_R1 4 GDVTAEEAAGASPAK 15 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK 222.75 1.22E-09 364095100 19832 21416.5 19899.2 16045.4 14553.9 13389 18704.6 15497.3 22948.8 24262.3 TRUE FALSE 18145.18426 20022.28196 18548.49775 17281.21949 13974.18734 14147.07361 17456.85026 15361.80874 25334.40988 27268.0969 0.665436401 0.734275004 0.680227073 0.633752313 0.512473877 0.518814117 0.640193202 0.563361968 0.929086103 1 14.73492639 -8.339154095 4.684793249 0.989426181 0.618877969 0.807826956 0.067682257 0.103106477 3.9606843 0.073136406 0.019374012 4.58E-09 8.339154095 -0.370548213 GDVTAEEAAGAS(ph)PAK ddPTM_A459_MK2206_30min_R2 8 GDVTAEEAAGASPAK 15 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK;GDVT(0.001)AEEAAGAS(0.999)PAK;GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK 173.51 3.18E-05 615892000 675692 571710 581273 556701 487265 417942 691956 505926 431250 615999 TRUE FALSE 727423.499 543319.7127 600652.3517 511216.7475 468132.5278 433847.0757 601101.346 572052.2653 468759.3455 595899.0031 1.220716087 0.911764762 1.007976769 0.857891597 0.785590386 0.72805471 1.008730243 0.959981914 0.786642272 1 19.18470831 -1.999161127 1.097756633 0.877618967 199.9999999 0.502711919 0.097256091 811.1279412 2.257544325 0.030764298 405083.2409 0.010019334 1.999161127 199.1223809 GDVTAEEAAGAS(ph)PAKANGQENGHVK ddPTM_A459_MK2206_30min_R1 1 GDVTAEEAAGASPAKANGQENGHVK 25 1 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GDVT(0.008)AEEAAGAS(0.992)PAKANGQENGHVK 50.827 0.018178 15151000 2493.6 2840.7 3163.4 2832.3 2596.4 2305.5 2232.5 2479.1 1899.7 1679.7 TRUE FALSE 2281.506226 2655.769914 2948.677222 3050.444237 2492.97989 2436.035418 2083.573998 2457.42549 2097.180613 1887.793917 1.208556827 1.406811352 1.561969871 1.615877776 1.32057841 1.290413851 1.103708397 1.301744575 1.110916077 1 10.88248556 -6.824269702 2.035867219 1.155543594 1.450993706 0.543572048 0.12681545 0.273278522 2.327253456 0.05403132 0.047554196 1.50E-07 6.824269702 0.295450112 GDVTAEEAAGAS(ph)PAKANGQENGHVK ddPTM_A459_MK2206_30min_R2 2 GDVTAEEAAGASPAKANGQENGHVK 25 1 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GDVTAEEAAGAS(1)PAKANGQENGHVK;GDVTAEEAAGAS(1)PAKANGQENGHVK 65.111 0.00098172 42118500 100956 192103 171093 177494 203029 151669 188021 126377 188718 157506 TRUE FALSE 108685.269 182563.4444 176797.1552 162992.1724 195057.0613 157440.8701 163333.6168 142894.9078 205132.3505 152366.5921 0.7133143 1.19818552 1.160340681 1.069736943 1.280182608 1.033303088 1.071977883 0.937836214 1.346307925 1 17.21718709 -4.754698305 24.99839461 1.120218444 0.713313609 0.509740845 0.120224481 186.8305145 692774.4806 0.028512661 0.271637903 1.76E-05 4.754698305 -0.406904835 GDYDAFFEAR ddPTM_A459_MK2206_30min_R1 2 GDYDAFFEAR 10 0 O75368 O75368 SH3BGRL SH3 domain-binding glutamic acid-rich-like protein 0 ; 136.99 0.024867 9459100 4389.9 4548 3918.8 3553.1 4403.8 4458.9 4549.7 4019.1 3479.8 4277.4 FALSE TRUE 4016.515953 4251.924373 3652.802774 3826.760378 4228.387321 4711.359065 4246.197814 3983.961432 3841.537663 4807.316605 0.835500609 0.884469388 0.759842356 0.796028365 0.879573298 0.980039272 0.88327817 0.82872874 0.799102281 1 12.23101611 -6.351268536 6.201656673 0.890871983 0.819627358 0.253677563 0.063909258 0.396546334 22.49619161 0.020970842 0.023827655 4.45E-07 6.351268536 -0.071244625 GDYDAFFEAR ddPTM_A459_MK2206_30min_R2 2 GDYDAFFEAR 10 0 O75368 O75368 SH3BGRL SH3 domain-binding glutamic acid-rich-like protein 0 ; 132.88 0.032774 7015100 31401 40624 32372 42836 34184 42835 38687 29030 34147 40625 FALSE TRUE 33805.0847 38606.67123 33451.26632 39336.16177 32841.7644 44465.11594 33607.35043 32824.32067 37117.04434 39299.40958 0.860193195 0.982372805 0.851190048 1.000935184 0.83568086 1.131444885 0.855161713 0.835236993 0.944468244 1 15.26222002 -4.728363974 23.0379014 0.931847545 0.860191891 0.057789487 0.091069767 5700.343819 3969834.831 0.02172376 2.884081851 1.87E-05 4.728363974 -0.071655654 GDYPLEAVR ddPTM_A459_MK2206_30min_R1 1 GDYPLEAVR 9 0 P14618;P14618-3;B4DNK4;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 158.07 0.012022 33596000 3714 3047.8 3295.7 2947.3 3562.2 3334.2 4293.4 2943.1 3448 3268.8 FALSE TRUE 3398.104797 2849.387666 3071.997066 3174.301557 3420.310031 3522.979523 4006.99512 2917.368787 3806.431939 3673.763622 0.924965552 0.775604519 0.836198891 0.864046216 0.931009826 0.958956505 1.090705754 0.794109008 1.036112371 1 11.84304309 -6.325465479 2.190549551 0.969558749 0.839398592 0.360311343 0.078984319 0.35421049 3.336351958 0.026371637 0.032421842 4.73E-07 6.325465479 -0.130160157 GDYPLEAVR ddPTM_A459_MK2206_30min_R2 3 GDYPLEAVR 9 0 P14618;P14618-3;B4DNK4;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;; 158.07 0.012022 81165600 93832 103723 94106 118367 100823 109597 106244 92716 91547 93092 FALSE TRUE 101015.8501 98572.26665 97243.44707 108696.0375 96864.18243 113767.7906 92294.03518 104834.2995 99509.59258 90054.41566 1.121720121 1.094585601 1.07982986 1.207003973 1.075618355 1.263322734 1.024869625 1.164121701 1.10499404 1 16.4585094 -8.556371694 19.47978562 0.999999997 1.128361315 0.257932711 0.065353358 750.5097599 436504.0508 0.05875483 0.015170432 2.78E-09 8.556371694 0.128361318 GEAAAERPGEAAVAS(ph)SPSK ddPTM_A459_MK2206_30min_R1 2 GEAAAERPGEAAVASSPSK 19 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.935)S(0.051)PS(0.014)K;GEAAAERPGEAAVAS(0.984)S(0.015)PS(0.001)K 201.9 7.02E-15 14686600 5711.3 5820.1 5323.6 4557.6 3349.1 3756.3 5083.5 4760.6 6647.2 7564 TRUE FALSE 5225.523944 5441.210432 4962.248864 4908.627142 3215.698255 3968.97846 4744.38899 4718.978576 7338.200227 8501.085425 0.614689029 0.64006067 0.583719445 0.577411812 0.378269138 0.466879023 0.558092144 0.555103065 0.863207445 1 13.05343134 -8.370618839 2.776756611 0.996938589 0.541568837 0.827177103 0.07163111 0.110713911 1.609599674 0.077198599 0.021121758 4.26E-09 8.370618839 -0.455369751 GEAAAERPGEAAVAS(ph)SPSKANGQENGHVK ddPTM_A459_MK2206_30min_R2 2 GEAAAERPGEAAVASSPSKANGQENGHVK 29 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.333)S(0.333)PS(0.333)KANGQENGHVK;GEAAAERPGEAAVAS(0.415)S(0.17)PS(0.415)KANGQENGHVK 71.426 9.78E-05 66494000 62695 84726 73972 85860 89072 64512 96843 63592 68894 83739 TRUE FALSE 67494.9774 80518.63004 76438.18956 78844.96335 85574.58573 66967.04937 84127.39777 71903.69274 74886.27559 81006.60329 0.833203402 0.99397613 0.943604428 0.973315263 1.056390248 0.826686303 1.038525186 0.887627549 0.924446558 1 16.30575189 -5.941100662 0.004585358 1.88890007 4.68E-05 0.036450309 0.074444043 118798.0522 132.3083293 26677.02686 27827.82435 1.15E-06 5.941100662 -1.888853307 GEAAAERPGEAAVASS(ph)PSK ddPTM_A459_MK2206_30min_R1 2 GEAAAERPGEAAVASSPSK 19 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.313)S(0.606)PS(0.08)K;GEAAAERPGEAAVAS(0.204)S(0.653)PS(0.143)K 74.812 0.0053126 443220000 11505.4 12610.4 11484 9167.9 8007.7 7952.7 12111.7 10395.3 12158.1 14674.2 TRUE FALSE 10526.80531 11789.46067 10704.49808 9874.013247 7688.736352 8402.975001 11303.75059 10304.41499 13421.978 16492.15068 0.638291847 0.714852835 0.649066231 0.598709861 0.466205803 0.509513596 0.68540185 0.62480723 0.813840369 1 14.00949193 -8.499704833 1.63969114 1.00051907 0.603648373 0.759755326 0.07063829 0.205883873 1.229512031 0.076123528 0.022103248 3.16E-09 8.499704833 -0.396870697 GEAAAERPGEAAVASS(ph)PSK ddPTM_A459_MK2206_30min_R2 3 GEAAAERPGEAAVASSPSK 19 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.211)S(0.578)PS(0.211)K;GEAAAERPGEAAVAS(0.394)S(0.589)PS(0.017)K;GEAAAERPGEAAVAS(0.209)S(0.791)PSK 229.93 5.85E-23 156749000 314636 225424 231301 218610 204898 169127 278541 212711 157476 269649 TRUE FALSE 338724.7741 214229.772 239012.4599 200748.8637 196852.675 175563.2465 241968.2321 240513.058 171172.9778 260850.3752 1.29854049 0.82127454 0.916281833 0.769593923 0.754657435 0.673041955 0.927613127 0.922034549 0.656211354 1 17.99286298 -4.76142708 21.39342554 0.821416999 1.298543007 0.627553012 0.108969392 0.042950621 51597.6614 0.026611521 0.148282407 1.73E-05 4.76142708 0.477126009 GEAAAERPGEAAVASS(ph)PSKANGQENGHVK ddPTM_A459_MK2206_30min_R1 2 GEAAAERPGEAAVASSPSKANGQENGHVK 29 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.235)S(0.652)PS(0.113)KANGQENGHVK;GEAAAERPGEAAVAS(0.215)S(0.57)PS(0.215)KANGQENGHVK 55.852 0.002632 24363000 3044.11 2963.7 2691.83 2656.49 2532.5 2001.53 2579.96 2459.95 2810.87 2259.84 TRUE FALSE 2785.192459 2770.762591 2509.116079 2861.09332 2431.625162 2114.854899 2407.855576 2438.442917 3103.069995 2539.80604 1.096616204 1.09093472 0.987916416 1.126500715 0.957405851 0.832683624 0.948047031 0.960090211 1.221774398 1 11.31050261 -6.27691893 24.05613919 0.975041204 1.070339667 0.160722932 0.097000716 902.7272825 1402888.889 0.031225407 0.03554263 5.29E-07 6.27691893 0.095298463 GEAAAERPGEAAVASS(ph)PSKANGQENGHVK ddPTM_A459_MK2206_30min_R2 2 GEAAAERPGEAAVASSPSKANGQENGHVK 29 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.113)S(0.443)PS(0.443)KANGQENGHVK;GEAAAERPGEAAVAS(0.174)S(0.618)PS(0.208)KANGQENGHVK 43.494 0.022286 19742400 16529.9 21580 22503.4 20709.6 27127.5 17773.1 26422.6 18073.9 20731 23262.8 TRUE FALSE 17795.44185 20508.36858 23253.65212 19017.55943 26062.33805 18449.46777 22953.28088 20436.22079 22534.14491 22503.73674 0.790777197 0.911331696 1.033324038 0.845084514 1.158133796 0.819840189 1.019976422 0.90812566 1.00135125 1 14.45787696 -4.84610669 3.292133466 0.968533824 0.7784709 0.262608592 0.092817168 0.367014719 6.529429239 0.021546386 0.162854405 1.43E-05 4.84610669 -0.190062924 GEAEQS(ph)EEEADEEDKAEDAR ddPTM_A459_MK2206_30min_R1 1 GEAEQSEEEADEEDKAEDAR 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GEAEQS(1)EEEADEEDKAEDAR 121.5 0.00013535 22928000 1831.1 2414.9 2586.8 1023 910.47 1406.1 2642.7 1830.3 4637 9693 TRUE FALSE 1675.35533 2257.689571 2411.215223 1101.791637 874.2040519 1485.712167 2466.410305 1814.29788 5119.032744 10893.84202 0.153789207 0.207244567 0.221337451 0.10113894 0.080247543 0.136380917 0.226404082 0.166543436 0.469901504 1 13.41122523 -8.651340377 1.745466584 1.000041636 0.156409877 0.967848619 0.047006527 0.091129581 0.575142223 0.049104293 0.013946093 2.23E-09 8.651340377 -0.843631759 GEAEQS(ph)EEEADEEDKAEDAR ddPTM_A459_MK2206_30min_R2 3 GEAEQSEEEADEEDKAEDAR 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GEAEQS(1)EEEADEEDKAEDAR;GEAEQS(1)EEEADEEDKAEDAR;GEAEQS(1)EEEADEEDKAEDAR 170.92 9.33E-10 376177100 555493 204208 310656 166948.6 147666.6 136585.4 272884 188241 118588.4 394180 TRUE FALSE 598021.9712 194067.3277 321013.116 153308.3653 141868.4673 141783.2531 237054.003 212844.745 128903.0047 381317.9389 1.568302747 0.508938363 0.841851597 0.402048657 0.372047714 0.371824241 0.62167021 0.55818183 0.338046002 1 18.54063488 -3.031896866 1.526932401 0.520997124 199.99654 0.656173117 0.21500311 151.7920524 2.424652716 0.056915449 104311.1095 0.000929187 3.031896866 199.4755428 GEAEQSEEEADEEDKAEDAREEEY(ph)EPEKMEAEDYVMAVVDK ddPTM_A459_MK2206_30min_R1 1 GEAEQSEEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK 41 3 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GEAEQS(0.103)EEEADEEDKAEDAREEEY(0.836)EPEKMEAEDY(0.061)VMAVVDK 48.07 0.0014397 38816000 2150.2 2992.1 2394.6 1978.2 1233.5 1171.6 1679.7 1577.6 2791.8 2284.3 TRUE FALSE 1967.314199 2797.313746 2232.061224 2130.561307 1184.367083 1237.93498 1567.650278 1563.80721 3082.017601 2567.29633 0.766298061 1.089595196 0.869420954 0.829885231 0.461328546 0.482194036 0.610623035 0.609126103 1.20049157 1 11.32603411 -6.017511697 13.34577738 0.685651756 0.91377323 0.098090599 0.228408789 3.336178863 2543.45173 0.067360274 0.090361993 9.60E-07 6.017511697 0.228121474 GEAGDLRR ddPTM_A459_MK2206_30min_R2 2 GEAGDLRR 8 1 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 0 ; 98.523 0.026236 4776400 21137 21790 19974.1 24667 26672 20168.2 23289.1 24933 23082 25780 FALSE TRUE 22755.26497 20707.94029 20640.02652 22651.62719 25624.72326 20935.71498 20231.21319 28191.82871 25089.63064 24938.80071 0.912444236 0.830350285 0.827627069 0.908288552 1.027504232 0.839483631 0.811234407 1.130440434 1.006048002 1 14.60610447 -7.759485121 24.99999997 1.051183169 0.880925036 0.555718211 0.067925698 38.81881785 496614.6574 0.035344505 0.019078507 1.74E-08 7.759485121 -0.170258133 GEAGT(ph)PVAAGTTAAAIPR ddPTM_A459_MK2206_30min_R2 1 GEAGTPVAAGTTAAAIPR 18 0 Q9Y6R0;A0A0C4DGH3;M0QXQ4 Q9Y6R0;M0QXQ4 NUMBL Numb-like protein 1 GEAGT(0.974)PVAAGT(0.013)T(0.013)AAAIPR 79.92 0.027353 3591700 12478 15295 9643.1 12151 11587 11534 14045 9638.8 11746 18711 TRUE FALSE 13433.32527 14535.47254 9964.596141 11158.22443 11132.03616 11972.93445 12200.87463 10898.62425 12767.64585 18100.4616 0.74215374 0.803044301 0.550516134 0.616460766 0.615013937 0.661471222 0.674064281 0.602118581 0.705376809 1 14.14373887 -8.565063068 18.58658331 1.000000002 0.656956048 0.690286156 0.068300157 348.8960731 153725.6759 0.069869847 0.018040312 2.72E-09 8.565063068 -0.343043954 GEAGVPAEFSIWTR ddPTM_A459_MK2206_30min_R1 1 GEAGVPAEFSIWTR 14 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7 O75369-8 FLNB Filamin-B 0 140.45 0.0077888 9234600 1538.5 1918.8 1751.1 1726.6 1874.7 1793.3 1900.7 1658.5 1489.5 1618.9 FALSE TRUE 1407.642496 1793.885771 1632.240211 1859.583031 1800.026729 1894.835096 1773.907771 1643.999909 1644.338855 1819.461554 0.773658829 0.985943213 0.897100687 1.022051291 0.989318365 1.04142629 0.974963042 0.903563972 0.903750261 1 10.82929585 -4.758263963 24.9998848 0.968211727 0.773658562 0.593262289 0.048442172 67.2973158 529738.9833 0.012814733 0.089037575 1.74E-05 4.758263963 -0.194553165 GEAGVPAEFSIWTR ddPTM_A459_MK2206_30min_R2 2 GEAGVPAEFSIWTR 14 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7 O75369-8 FLNB Filamin-B 0 ; 124.39 0.021906 3577200 36168 48682 42118 42243 45965 42625 43891 36847 34424 42513 FALSE TRUE 38937.04989 46264.52267 43522.1931 38791.61177 44160.18314 44247.12424 38128.05898 41663.02941 37418.1373 41125.80429 0.946779049 1.124951195 1.058269713 0.943242629 1.073782845 1.075896873 0.927107922 1.013062969 0.909845727 1 15.32775627 -7.261398848 24.99998364 0.963592736 1.039500604 0.270262218 0.060008005 5.158508682 3182899.364 0.023542936 0.017039496 5.48E-08 7.261398848 0.075907868 GEAS(ph)SLNGESH ddPTM_A459_MK2206_30min_R2 1 GEASSLNGESH 11 0 Q8IY57-3;Q8IY57;Q8IY57-5 Q8IY57-3 YAF2 YY1-associated factor 2 1 GEAS(0.613)S(0.387)LNGESH 147.91 0.0006582 10356000 33722 29752 33114 42568 31618 47339 31065 27809 26491 31925 TRUE FALSE 36303.78225 28274.55894 34218.00423 39090.05823 30376.51845 49140.51882 26986.12818 31443.73178 28795.1393 30883.28986 1.175515381 0.915529371 1.107977951 1.265734914 0.983590757 1.591168526 0.873810022 1.018147093 0.932385747 1 14.91453882 GEASS(ph)LNGESH ddPTM_A459_MK2206_30min_R2 1 GEASSLNGESH 11 0 Q8IY57-3;Q8IY57;Q8IY57-5 Q8IY57-3 YAF2 YY1-associated factor 2 1 GEAS(0.323)S(0.672)LNGES(0.005)H 152.67 0.001838 0 40580 37199 49604 52541 42669 47107 52103 29102 34236 46491 TRUE FALSE 43686.836 35351.75175 51257.7726 48248.23223 40993.60067 48899.68989 45261.81351 32905.73132 37213.7854 44974.00248 0.971379766 0.786048602 1.139720056 1.072802721 0.911495495 1.087287926 1.006399498 0.731661171 0.827451046 1 15.45680366 -7.738585625 24.98981344 0.834667077 0.99702916 0.252550862 0.111723208 277.7218405 303680.0033 0.05306418 0.030610265 1.83E-08 7.738585625 0.162362083 GEAVLRPGLDAEPELS(ph)PEEQR ddPTM_A459_MK2206_30min_R1 2 GEAVLRPGLDAEPELSPEEQR 21 1 C9JQV0;Q9BRJ6 C9JQV0 C7orf50 Uncharacterized protein C7orf50 1 GEAVLRPGLDAEPELS(1)PEEQR;GEAVLRPGLDAEPELS(1)PEEQR 69.081 0.003097 240850000 13616.4 13983.1 14722.6 12038.3 16338.6 13984 14890.3 13884.8 12752.3 11685.4 TRUE FALSE 12458.25368 13072.79765 13723.27093 12965.49195 15687.79896 14775.762 13896.99526 13763.40666 14077.94722 13133.07557 0.948616614 0.99541022 1.044939615 0.987239575 1.194525904 1.125080101 1.058167615 1.047995695 1.071945954 1 13.68091719 -5.374736268 1.262875296 1.080964705 0.95185982 0.348559058 0.055175427 0.717010231 1.859199514 0.018542174 0.091322862 4.22E-06 5.374736268 -0.129104885 GECSGPATVNNSS(ph)DTESIPSPHTEAAK ddPTM_A459_MK2206_30min_R1 1 GECSGPATVNNSSDTESIPSPHTEAAK 27 0 Q9Y618 Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 GECSGPATVNNS(0.148)S(0.469)DT(0.148)ES(0.219)IPS(0.015)PHTEAAK 90.778 1.76E-05 3691700 631.3 958.49 711.14 667.42 1016.9 621.7 765.08 907 591.58 751.58 TRUE FALSE 577.6046199 896.0921268 662.8697981 718.824804 976.3947197 656.9001167 714.0429092 899.0701946 653.076858 844.6914045 0.68380549 1.06085148 0.784747891 0.850991025 1.155918853 0.777680598 0.84532991 1.064377108 0.773154379 1 9.72228056 -4.736954707 24.64239723 0.919318709 0.683804229 0.229537009 0.13162077 2907.550076 2926098.313 0.031302249 2.01190939 1.83E-05 4.736954707 -0.235514481 GECSGPATVNNSSDT(ph)ESIPSPHTEAAK ddPTM_A459_MK2206_30min_R2 1 GECSGPATVNNSSDTESIPSPHTEAAK 27 0 Q9Y618 Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 GECSGPATVNNS(0.001)S(0.004)DT(0.788)ES(0.207)IPSPHTEAAK 173.68 5.55E-22 12302000 14167 17412 15629 18794 16123 17760 17300 12631 13411 16530 TRUE FALSE 15251.63641 16547.3454 16150.06306 17258.47008 15489.93001 18435.86925 15028.48922 14281.91507 14577.46454 15990.62745 0.953785988 1.034815266 1.009970566 1.079286609 0.968688068 1.152917188 0.939831114 0.893142881 0.911625549 1 13.96493893 -7.491159784 24.86266561 0.924727894 1.032662507 0.394282609 0.058569585 545.7005831 427744.3233 0.023210066 0.015630798 3.23E-08 7.491159784 0.107934613 GECSGPATVNNSSDTESIPS(ph)PHTEAAK ddPTM_A459_MK2206_30min_R2 1 GECSGPATVNNSSDTESIPSPHTEAAK 27 0 Q9Y618 Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 GECSGPATVNNS(0.002)S(0.019)DT(0.016)ES(0.036)IPS(0.885)PHT(0.042)EAAK 118.9 5.39E-12 16614000 39370 54160 47350 64177 52143 47163 52192 46988 44164 47796 TRUE FALSE 42384.19747 51470.49316 48928.62537 58933.53381 50095.60382 48957.82101 45339.12771 53129.49293 48005.30489 46236.42043 0.91668423 1.113202378 1.058226933 1.274612811 1.08346631 1.058858375 0.980593378 1.149083178 1.038257383 1 15.49674209 -6.722275956 4.884540556 1.050358838 1.09985779 0.048802161 0.091368398 0.658240786 36.00010526 0.031812575 0.030855663 1.90E-07 6.722275956 0.049498952 GEDAEES(ph)LEEEEALDPLGIMR ddPTM_A459_MK2206_30min_R1 3 GEDAEESLEEEEALDPLGIMR 21 0 H7BZZ1;F6TR53;Q53T59 H7BZZ1 HS1BP3 HCLS1-binding protein 3 1 GEDAEES(1)LEEEEALDPLGIMR;GEDAEES(1)LEEEEALDPLGIMR;GEDAEES(1)LEEEEALDPLGIMR 156.2 1.24E-07 7376100 3359.26 2823.1 3681.9 2316.26 3475.83 3372.38 4351.66 3190.45 3430.67 3906.1 TRUE FALSE 3073.537297 2639.315677 3431.982886 2494.658747 3337.380331 3563.321241 4061.368701 3162.556232 3787.300423 4390.017158 0.700119655 0.601208511 0.781769812 0.568257175 0.760220339 0.811687315 0.925137319 0.720397237 0.862707431 1 12.10001086 -6.626906912 2.818126392 0.852762177 0.666418892 0.541626822 0.0866944 0.218200685 3.503839676 0.029390627 0.029456246 2.36E-07 6.626906912 -0.186343285 GEDAEES(ph)LEEEEALDPLGIMR ddPTM_A459_MK2206_30min_R2 1 GEDAEESLEEEEALDPLGIMR 21 0 H7BZZ1;F6TR53;Q53T59 H7BZZ1 HS1BP3 HCLS1-binding protein 3 1 GEDAEES(1)LEEEEALDPLGIMR 118.05 0.00033536 0 695.66 968.09 1933.6 1263.1 1998.6 2219.2 1081.8 666.96 1296.2 2023.7 TRUE FALSE 748.9202645 920.0160583 1998.065259 1159.90069 1920.124922 2303.653211 939.7583605 754.133962 1408.941133 1957.666835 0.382557569 0.469955379 1.020636006 0.592491362 0.980823135 1.176734044 0.480039986 0.385220789 0.719704246 1 10.93491955 -5.093469769 7.10056424 0.773960399 0.403595439 0.268367782 0.24309488 0.340831724 21.97552576 0.066152285 0.179297786 8.06E-06 5.093469769 -0.37036496 GEDLQSIS(ph)PGSR ddPTM_A459_MK2206_30min_R2 1 GEDLQSISPGSR 12 0 Q13077 Q13077 TRAF1 TNF receptor-associated factor 1 1 GEDLQSIS(0.5)PGS(0.5)R 120.29 0.0040688 10888000 72019 87847 89429 76913 83521 80583 86716 64499 76992 84206 TRUE FALSE 77532.83001 83484.64572 92410.51823 70628.96187 80241.54588 83649.64253 75330.08504 72929.24076 83688.62499 81458.36512 0.951809307 1.024875046 1.134450932 0.867055971 0.985062071 1.026900582 0.924767947 0.895294678 1.027379139 1 16.31377524 -5.764546682 24.99999661 0.958808615 1.035828075 0.223136307 0.064993357 121.1540402 974765.936 0.018214827 0.028355405 1.72E-06 5.764546682 0.07701946 GEDLQSISPGS(ph)R ddPTM_A459_MK2206_30min_R2 1 GEDLQSISPGSR 12 0 Q13077 Q13077 TRAF1 TNF receptor-associated factor 1 1 GEDLQSIS(0.003)PGS(0.997)R 103.88 0.010291 12161000 58796 74770 72569 74090 78479 61644 81476 62995 67866 73868 TRUE FALSE 63297.46697 71057.03053 74988.41424 68036.61 75397.52013 63989.90562 70778.10333 71228.66279 73768.86201 71457.69321 0.885803391 0.994393008 1.04940995 0.952124354 1.055135098 0.895493581 0.990489619 0.996794881 1.032343177 1 16.12480172 -4.761547231 10.04125521 0.994965074 0.885365766 0.356823458 0.044452728 0.080660475 178.4565375 0.010709218 0.060412095 1.73E-05 4.761547231 -0.109599308 GEDLTEEEDGGIIR ddPTM_A459_MK2206_30min_R2 1 GEDLTEEEDGGIIR 14 0 Q02790 Q02790 FKBP4 "Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed" 0 220.29 1.10E-07 3332600 8895.4 9296.7 8700.4 6953.2 7458.2 6017.2 6723.4 4411.9 5847.7 7927.6 FALSE TRUE 9576.438663 8835.039397 8990.466994 6385.101318 7165.353594 6246.188762 5840.609504 4988.550478 6356.322376 7668.923061 1.248733178 1.152057378 1.172324578 0.83259426 0.934336352 0.814480562 0.761594484 0.65048905 0.828841589 1 12.90480828 -5.75086765 1.207711894 0.793479138 1.243425805 0.727355866 0.098128949 0.251206859 0.716463563 0.034181459 0.091650981 1.77E-06 5.75086765 0.449946668 GEDS(ph)AEETEAK ddPTM_A459_MK2206_30min_R2 1 GEDSAEETEAK 11 0 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 GEDS(1)AEETEAK 145.29 0.00070435 3760500 20032 11444 15186 13410 12144 10315 19671 16866 11408 16214 TRUE FALSE 21565.66532 10875.7076 15692.29366 12314.3601 11667.16554 10707.54455 17088.17407 19070.44411 12400.24722 15684.93851 1.374928267 0.693385415 1.000468931 0.785107324 0.743845157 0.682664108 1.089463887 1.215844366 0.790583094 1 13.93709225 -10.19341021 12.61555419 0.999999986 0.921754436 0.007110427 0.224282077 0 0 0.215726291 0.052321311 6.41E-11 10.19341021 -0.07824555 GEDS(ph)AEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_A459_MK2206_30min_R1 1 GEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 41 1 Q12906-7;Q12906-4;Q12906-6 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 GEDS(0.742)AEET(0.258)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 99.94 1.31E-16 17740000 10331 11010 10831 8440.6 7830 7347.7 12152 10136 13568 16879 TRUE FALSE 9452.2942 10293.247 10095.8219 9090.696474 7518.11452 7763.720424 11341.36225 10047.38202 14978.44215 18970.09795 0.498273347 0.542603788 0.532196614 0.479211889 0.396313954 0.409260956 0.597854702 0.529643128 0.789581698 1 14.21143951 -8.447248322 1.473459518 1.00220215 0.485703201 0.899072179 0.055621386 0.122164591 0.574817797 0.057126964 0.017060198 3.57E-09 8.447248322 -0.516498949 down GEDS(ph)AEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_A459_MK2206_30min_R2 2 GEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 41 1 Q12906-7;Q12906-4;Q12906-6 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 GEDS(0.892)AEET(0.108)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK;GEDS(0.951)AEET(0.049)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 81.384 1.66E-09 16672800 360260 254500 308340 280230 251990 206401 314970 242430 210100 334960 TRUE FALSE 387841.7826 241861.9001 318619.9017 257334.3126 242095.6065 214255.7347 273614.0607 274116.4334 228374.1182 324030.2826 1.196930668 0.746417582 0.983302854 0.794167479 0.747138831 0.661221331 0.844408919 0.845959307 0.704792516 1 18.30576912 -4.755882886 24.99789812 0.808075778 1.196931286 0.544039519 0.104993751 134.763846 606220.5695 0.025603395 0.217761203 1.75E-05 4.755882886 0.388855508 GEDVPS(ph)EEEEEEENGFEDR ddPTM_A459_MK2206_30min_R1 2 GEDVPSEEEEEEENGFEDR 19 0 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 1 GEDVPS(1)EEEEEEENGFEDR;GEDVPS(1)EEEEEEENGFEDR 294.94 5.97E-86 48463000 13756.1 14380.4 13012.7 8085.5 11079.8 13282.7 18458.9 9981.3 16559.7 19341.1 TRUE FALSE 12586.07146 13444.23335 12129.43418 8708.246611 10638.4681 14034.755 17227.54046 9894.034546 18281.14007 21737.22149 0.579010131 0.618489044 0.558002971 0.400614523 0.489412509 0.645655426 0.792536455 0.455165558 0.841006294 1 14.40787992 -8.730124992 0.609180718 1.011680797 0.541586917 0.607129505 0.111828559 0.796881005 0.633827006 0.126866438 0.050127717 1.86E-09 8.730124992 -0.470093881 GEDVPS(ph)EEEEEEENGFEDR ddPTM_A459_MK2206_30min_R2 2 GEDVPSEEEEEEENGFEDR 19 0 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 1 GEDVPS(1)EEEEEEENGFEDR;GEDVPS(1)EEEEEEENGFEDR 143.99 6.76E-05 315710000 107394 100622 102973 117135 97542 103104 117563 90469 84922 119209 TRUE FALSE 115616.1672 95625.2578 106406.0684 107564.6958 93712.01097 107027.695 102126.8369 102293.6089 92308.36206 115319.2201 1.002575001 0.829222204 0.92270888 0.932756012 0.812631328 0.928099365 0.885601176 0.887047353 0.800459472 1 16.81527346 -4.742420941 24.60379393 0.886388176 1.002575471 0.25349112 0.058488856 1425.140961 1843560.177 0.013576615 0.470032923 1.81E-05 4.742420941 0.116187294 GEEDWLYER ddPTM_A459_MK2206_30min_R2 1 GEEDWLYER 9 0 J3QQZ9;Q9NVS9-4;Q9NVS9-3;Q9NVS9 J3QQZ9 PNPO Pyridoxine-5-phosphate oxidase 0 133.57 0.042803 3078600 13159 17697 13634 14568 14503 15589 14150 12612 12173 13314 FALSE TRUE 14166.46316 16818.19271 14088.55076 13377.7478 13933.53935 16182.25032 12292.088 14260.4317 13231.78554 12879.56527 1.099917805 1.305804378 1.093868501 1.038680073 1.081833048 1.256428302 0.954386871 1.107213746 1.027347217 1 13.65279628 -2.422676177 0.131922444 0.960937099 1.607020185 0.234598754 0.09065276 93.87753519 1.049895071 0.50286976 10.91725041 0.003778538 2.422676177 0.646083086 GEEGS(ph)DDDETENGPKPK ddPTM_A459_MK2206_30min_R1 4 GEEGSDDDETENGPKPK 17 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 GEEGS(1)DDDETENGPKPK;GEEGS(0.999)DDDET(0.001)ENGPKPK;GEEGS(0.912)DDDET(0.088)ENGPKPK;GEEGS(0.972)DDDET(0.028)ENGPKPK 227.67 1.46E-15 147029500 16779.2 20614.8 21088 17022.9 13472.9 11803.9 15145.3 14717.4 18587.4 17604.6 TRUE FALSE 15352.04093 19272.77277 19656.60531 18334.00671 12936.24586 12472.22662 14134.98467 14588.72732 20519.62675 19785.59076 0.77592027 0.97408124 0.99348084 0.926634283 0.653821563 0.63036918 0.714408018 0.737341003 1.037099524 1 14.27216252 -6.221724845 20.93161669 0.770061859 0.926994225 0.141646342 0.138143281 124.1177443 65415.11176 0.041357725 0.053390669 6.00E-07 6.221724845 0.156932366 GEEGS(ph)DDDETENGPKPK ddPTM_A459_MK2206_30min_R2 6 GEEGSDDDETENGPKPK 17 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 GEEGS(1)DDDETENGPKPK;GEEGS(0.943)DDDET(0.057)ENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(0.999)DDDET(0.001)ENGPKPK;GEEGS(0.995)DDDET(0.005)ENGPKPK;GEEGS(0.969)DDDET(0.031)ENGPKPK 198.95 3.13E-07 319003600 338582 329145 303273 265361 292283 199426.5 366260 273832 215903.4 322104 TRUE FALSE 364504.0982 312800.1379 313383.9705 243680.1575 280806.5008 207015.8152 318169.622 309622.7826 234682.2875 311593.7729 1.169805465 1.003871596 1.005745293 0.782044375 0.9011942 0.664377254 1.021103917 0.993674488 0.75316745 1 18.24930688 -4.989185216 1.365084283 0.875003542 1.214762819 0.381666961 0.114086942 0.943558908 2.076191802 0.034021932 0.400700265 1.03E-05 4.989185216 0.339759277 GEEHCGHLIEAHK ddPTM_A459_MK2206_30min_R2 2 GEEHCGHLIEAHK 13 0 H7C4E5;C9J8T6;Q14061 H7C4E5 COX17 Cytochrome c oxidase copper chaperone 0 ; 87.641 0.008737 6077300 39256 35686 32418 32833 35747 30369 42314 29163 26190 37443 FALSE TRUE 42261.46954 33913.88513 33498.79994 30150.43887 34343.39317 31524.71358 36758.12097 32974.70423 28467.95886 36221.23798 1.16675939 0.936298344 0.924838625 0.832396698 0.94815625 0.870337828 1.014822326 0.910369332 0.785946601 1 15.14454824 -4.748726935 3.608252114 0.909301224 1.206575658 0.570590848 0.066168344 0.229774347 4.810223703 0.016246648 0.194428214 1.78E-05 4.748726935 0.297274434 GEELSCEER ddPTM_A459_MK2206_30min_R2 1 GEELSCEER 9 0 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 0 132.76 0.045517 22837000 29367 44170 46664 51191 38163 51546 47596 45703 44360 44257 FALSE TRUE 31615.3601 41976.58203 48219.75447 47008.53155 36664.52887 53507.61915 41346.58803 51676.53902 48218.35262 42812.89771 0.738454106 0.9804658 1.126290371 1.097999296 0.856389799 1.249801392 0.965750749 1.207032034 1.126257628 1 15.38575786 -4.809861661 2.755322099 1.080533142 0.685655028 0.469176785 0.10933516 0.347528825 3.774453734 0.027129571 0.307917457 1.55E-05 4.809861661 -0.394878115 GEFS(ph)ASPMLK ddPTM_A459_MK2206_30min_R1 1 GEFSASPMLK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEFS(0.623)AS(0.377)PMLK 130.01 0.0028521 275980000 8080.5 8022.6 7837.8 7084.5 7679.7 6504.7 7725 6827.1 6519.9 6244.1 TRUE FALSE 7393.211043 7500.327282 7305.791973 7630.149418 7373.801287 6872.990493 7209.679345 6767.411384 7197.666937 7017.666249 1.0535142 1.068777998 1.0410572 1.087277329 1.050748358 0.979384064 1.027361389 0.964339304 1.025649651 1 12.77677562 -6.658943932 5.72375594 0.99906388 1.06229976 0.683637751 0.020810239 0.113522965 5.410394428 0.006427792 0.006397313 2.19E-07 6.658943932 0.063235879 GEFS(ph)ASPMLK ddPTM_A459_MK2206_30min_R2 2 GEFSASPMLK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEFS(0.823)AS(0.177)PMLK;GEFS(0.5)AS(0.5)PMLK 122.18 0.004546 449070000 108056 113510 117121 109986 109955 99062 120837 97617 96092 111983 TRUE FALSE 116328.8504 107873.2585 121025.7557 100999.792 105637.6142 102831.8738 104970.9567 110375.8771 104449.9085 108329.0039 1.073847689 0.995792951 1.11720547 0.932343032 0.97515541 0.949255233 0.969001403 1.018894969 0.964191534 1 16.72506003 -5.770611979 24.99927293 0.972451325 1.055633134 0.565399624 0.035852339 140.7885109 383709.7702 0.00974644 0.014687211 1.70E-06 5.770611979 0.08318181 GEFSAS(ph)PMLK ddPTM_A459_MK2206_30min_R1 5 GEFSASPMLK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEFS(0.067)AS(0.933)PMLK;GEFS(0.047)AS(0.953)PMLK;GEFS(0.045)AS(0.955)PMLK;GEFS(0.155)AS(0.845)PMLK;GEFS(0.106)AS(0.894)PMLK 159.09 0.00046461 917170000 25275 24661.8 25639.4 21939 23835.9 21160.4 24385.4 22783.6 21620.3 19551.5 TRUE FALSE 23125.22853 23056.31234 23899.06896 23628.74558 22886.46563 22358.48356 22758.69446 22584.40539 23867.80755 21973.68743 1.052405456 1.04926915 1.087622141 1.075320001 1.041539601 1.017511678 1.035724866 1.027793149 1.086199466 1 14.42348937 -6.380555198 5.226707867 1.03480366 1.066335876 0.314069216 0.022871793 0.296655307 11.52671337 0.007186264 0.008160147 4.16E-07 6.380555198 0.031532216 GEFSAS(ph)PMLK ddPTM_A459_MK2206_30min_R2 2 GEFSASPMLK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEFS(0.397)AS(0.603)PMLK;GEFS(0.271)AS(0.729)PMLK 132.17 0.0024854 416480000 80958 95927 93423 95850 94446 71904 97586 88660 79995 82928 TRUE FALSE 87156.20673 91163.40467 96537.67619 88018.74839 90737.57549 74640.35711 84772.84098 100248.1664 86952.8205 80222.06615 1.086436824 1.136388142 1.203380576 1.097188749 1.131080011 0.930421774 1.05672722 1.249633314 1.083901533 1 16.2917115 -6.576656271 24.99999608 1.073884179 1.133641634 0.139231468 0.081086973 233.9983549 108778.8559 0.028573461 0.028573462 2.65E-07 6.576656271 0.059757456 GEGDAPFSEPGT(ph)TSTQRPSSPETATK ddPTM_A459_MK2206_30min_R2 2 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEGDAPFS(0.061)EPGT(0.282)T(0.075)S(0.092)T(0.031)QRPS(0.217)S(0.217)PET(0.023)AT(0.002)K;GEGDAPFS(0.001)EPGT(0.166)T(0.166)S(0.166)T(0.166)QRPS(0.166)S(0.166)PET(0.001)ATK 85.062 0.00012887 121648400 105312 104553 104549 113226 95484 88059 117476 90082 82171 116156 TRUE FALSE 113374.7677 99361.05005 108034.6115 103975.0736 91734.81839 91410.14695 102051.2601 101856.0267 89318.08505 112365.8392 1.008978961 0.884263854 0.96145423 0.925326365 0.816394191 0.813504777 0.908205383 0.906467903 0.794886468 1 16.77784398 -6.063071498 7.583921751 0.86743024 0.944656885 0.240294612 0.06293338 0.400528449 43.24768376 0.017903022 0.023293129 8.65E-07 6.063071498 0.077226644 GEGDAPFSEPGTT(ph)STQRPSSPETATK ddPTM_A459_MK2206_30min_R1 1 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEGDAPFS(0.001)EPGT(0.009)T(0.196)S(0.196)T(0.196)QRPS(0.196)S(0.196)PET(0.01)AT(0.001)K 73.389 0.00045611 15046000 1057.7 1162 1521.9 830.56 1130.4 1084.7 1173.7 1176 1217.7 1087.5 TRUE FALSE 967.7370608 1086.353589 1418.597668 894.5298751 1085.373774 1146.114777 1095.404615 1165.718356 1344.284273 1222.22771 0.791781313 0.888830763 1.160665608 0.731884793 0.888029101 0.937726061 0.896236115 0.953765281 1.099864012 1 10.25529738 -8.056671483 4.32500065 1.048099223 0.904351942 0.235138514 0.107217863 0.338858995 12.75574259 0.076200368 0.027948798 8.78E-09 8.056671483 -0.143747281 GEGDAPFSEPGTTST(ph)QRPSSPETATK ddPTM_A459_MK2206_30min_R1 1 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEGDAPFSEPGT(0.015)T(0.036)S(0.116)T(0.548)QRPS(0.142)S(0.142)PET(0.001)ATK 100.24 2.74E-06 139650000 3875 3634.1 3630.4 2856.9 3291.2 3317.8 4098 3231.5 3963.9 3713.6 TRUE FALSE 3545.410902 3397.519429 3383.978563 3076.938933 3160.104535 3505.650969 3824.629897 3203.247336 4375.96159 4173.668804 0.849471069 0.814036664 0.810792308 0.737226425 0.757152683 0.839944695 0.916371202 0.767489584 1.048468816 1 12.02710041 -8.264728342 24.98577169 1.024234438 0.811765927 0.744481713 0.049837584 153.0955191 1163015.128 0.044623587 0.013368912 5.44E-09 8.264728342 -0.212468511 GEGDAPFSEPGTTSTQRPS(ph)SPETATK ddPTM_A459_MK2206_30min_R1 2 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEGDAPFSEPGT(0.001)T(0.011)S(0.011)T(0.04)QRPS(0.368)S(0.368)PET(0.172)AT(0.029)K;GEGDAPFSEPGT(0.015)T(0.044)S(0.044)T(0.046)QRPS(0.407)S(0.407)PET(0.024)AT(0.013)K 99.971 1.16E-06 421990000 8172.8 8291.3 8606.3 6195.6 6902.6 7128.6 8634.4 6935.3 9138.1 8194.3 TRUE FALSE 7477.660443 7751.534863 8022.128335 6672.786186 6627.654826 7532.215172 8058.41493 6874.665403 10088.0382 9209.471748 0.811953242 0.841691584 0.871073668 0.724556888 0.71965635 0.817877005 0.875013807 0.746477712 1.095398137 1 13.16890269 -8.262618066 24.99999882 1.047699092 0.802492333 0.749965565 0.056964314 52.93462799 1122673.435 0.047928229 0.015036762 5.46E-09 8.262618066 -0.245206759 GEGDAPFSEPGTTSTQRPS(ph)SPETATK ddPTM_A459_MK2206_30min_R2 2 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEGDAPFS(0.005)EPGT(0.004)T(0.016)S(0.016)T(0.003)QRPS(0.472)S(0.472)PET(0.011)AT(0.001)K;GEGDAPFSEPGT(0.002)T(0.006)S(0.006)T(0.027)QRPS(0.478)S(0.478)PET(0.001)ATK 81.477 7.17E-05 134962000 108263 104374 108874 108476 114293 97940 113806 107541 88780 115237 TRUE FALSE 116551.6985 99190.93893 112503.8048 99613.1638 109805.2825 101667.1753 98863.13549 121596.9779 96501.92392 111476.8261 1.045524012 0.889789765 1.009212486 0.893577322 0.985005461 0.91200278 0.886849213 1.090782561 0.865668025 1 16.76638431 -10.71398119 4.54688082 1.000009863 0.953013367 0.035959462 0.072759223 6.66E-06 1.18E-06 0.064470673 0.015633154 1.93E-11 10.71398119 -0.046996496 GEGDAPFSEPGTTSTQRPSS(ph)PETATK ddPTM_A459_MK2206_30min_R1 2 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEGDAPFS(0.003)EPGT(0.009)T(0.038)S(0.012)T(0.009)QRPS(0.402)S(0.516)PET(0.01)AT(0.002)K;GEGDAPFSEPGT(0.012)T(0.02)S(0.053)T(0.168)QRPS(0.135)S(0.589)PET(0.02)AT(0.002)K 89.954 2.57E-05 229876000 4963.8 4935.4 5085.3 4184.8 4194 4289.6 5281.2 4382.1 4730.6 5210.4 TRUE FALSE 4541.602744 4614.104563 4740.124004 4507.114021 4026.944099 4532.473445 4928.900784 4343.787762 5222.362799 5855.903689 0.775559672 0.787940651 0.809460718 0.769670107 0.687672529 0.774000681 0.84169772 0.741779236 0.891811593 1 12.51567611 -8.506057505 3.238079878 0.99953511 0.774655228 0.780797833 0.038599392 0.10120739 2.588323197 0.038968829 0.010345266 3.12E-09 8.506057505 -0.224879881 GEGDHNHDTGEGGQGGEEPR ddPTM_A459_MK2206_30min_R1 3 GEGDHNHDTGEGGQGGEEPR 20 0 Q5TE25;Q9NWM0-5;Q9NWM0;Q9NWM0-6 Q5TE25 SMOX Spermine oxidase 0 ;; 121.01 0.0011313 1638750 1276.8 663.15 959.15 434.22 1047.39 1013.59 1253.76 883.34 746.59 791.62 FALSE TRUE 1168.201455 619.9788145 894.0455703 467.6636996 1005.670238 1070.97859 1170.123958 875.6170515 824.2007022 889.691862 1.313040509 0.696846673 1.004893501 0.525646822 1.130357915 1.2037635 1.315201372 0.984180129 0.926388941 1 9.797161946 GEGDHNHDTGEGGQGGEEPR ddPTM_A459_MK2206_30min_R2 1 GEGDHNHDTGEGGQGGEEPR 20 0 Q5TE25;Q9NWM0-5;Q9NWM0;Q9NWM0-6 Q5TE25 SMOX Spermine oxidase 0 65.423 0.0095194 846870 2543.4 3651.8 3030.5 3711.5 4161.1 3948 4342.6 2708 4116.7 2938.4 FALSE TRUE 2738.12466 3470.456922 3131.535357 3408.258577 3997.714306 4098.243906 3772.411404 3061.944898 4474.763125 2842.520249 0.963273581 1.220908426 1.101675655 1.199027018 1.406397829 1.441764191 1.327136159 1.077193698 1.574223834 1 11.47295491 -6.009643012 4.295526038 1.316302369 1.110917544 0.235141063 0.167946483 0.296140705 13.28302267 0.047535474 0.067456555 9.78E-07 6.009643012 -0.205384825 GEGDIHENVDTDLPGS(ph)LGQSEEKPVPAAPVPSPVAPAPVPSR ddPTM_A459_MK2206_30min_R1 4 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSR 42 1 Q9UK76;Q9UK76-3 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 GEGDIHENVDT(0.002)DLPGS(0.831)LGQS(0.166)EEKPVPAAPVPSPVAPAPVPSR;GEGDIHENVDT(0.003)DLPGS(0.834)LGQS(0.164)EEKPVPAAPVPSPVAPAPVPSR;GEGDIHENVDT(0.01)DLPGS(0.843)LGQS(0.147)EEKPVPAAPVPSPVAPAPVPSR;GEGDIHENVDTDLPGS(0.831)LGQS(0.169)EEKPVPAAPVPSPVAPAPVPSR 119.11 8.16E-30 325972000 11103.2 11297.7 10270.7 7734.1 8796.8 9913.3 12078.4 8746.9 12361.8 15135.4 TRUE FALSE 10158.81453 10562.21768 9573.5535 8329.781722 8446.404828 10474.58248 11272.67197 8670.426775 13646.85335 17010.48762 0.597208896 0.620923863 0.562803002 0.489685064 0.496541017 0.615772029 0.662689526 0.509710654 0.802261149 1 14.05413688 -8.494684842 3.284657363 0.998813476 0.570910193 0.862942319 0.055551127 0.076761852 1.947308395 0.057541713 0.015266516 3.20E-09 8.494684842 -0.427903283 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(ph)PVAPAPVPSR ddPTM_A459_MK2206_30min_R2 4 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSR 42 1 Q9UK76;Q9UK76-3 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 GEGDIHENVDTDLPGS(0.001)LGQS(0.001)EEKPVPAAPVPS(0.993)PVAPAPVPS(0.005)R;GEGDIHENVDTDLPGS(0.023)LGQS(0.005)EEKPVPAAPVPS(0.971)PVAPAPVPS(0.001)R;GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(0.996)PVAPAPVPS(0.004)R;GEGDIHENVDTDLPGS(0.017)LGQS(0.004)EEKPVPAAPVPS(0.967)PVAPAPVPS(0.012)R 105.21 9.68E-23 509630000 199447 154927 169005 185857 152172 138479 173094 148588 117194 203253 TRUE FALSE 214716.8157 147233.5505 174639.5423 170671.8886 146196.9627 143748.9154 150366.5499 168008.9618 127387.3223 196620.8713 1.092034708 0.74881954 0.888204499 0.868025289 0.743547528 0.73109693 0.764753756 0.854481829 0.647883012 1 17.58505695 -4.755327639 24.9928403 0.799704588 1.092035189 0.44952911 0.095047377 178.2547226 728869.2615 0.022456757 0.201278646 1.76E-05 4.755327639 0.292330601 GEGPAIPGDT(ph)PPPTPR ddPTM_A459_MK2206_30min_R1 1 GEGPAIPGDTPPPTPR 16 0 O75145-2;O75145 O75145-2 PPFIA3 Liprin-alpha-3 1 GEGPAIPGDT(0.965)PPPT(0.035)PR 92.773 0.024622 3974600 1441.2 1068.4 1028.5 976.02 1231 1510.7 1528.2 1129.5 961.97 961.63 TRUE FALSE 1318.618372 998.8469658 958.6882856 1051.19323 1181.966663 1596.234528 1426.256566 1119.624901 1061.970224 1080.763984 1.220079861 0.924204526 0.887046848 0.972639026 1.093639944 1.47695015 1.319674404 1.035956894 0.982610671 1 10.07783579 -6.521649527 24.99866086 1.187322082 0.993090046 0.170038168 0.164086043 74.5637233 1516451.939 0.057513342 0.058249805 3.01E-07 6.521649527 -0.194232036 GEGPGEAGGPLT(ph)PR ddPTM_A459_MK2206_30min_R1 3 GEGPGEAGGPLTPR 14 0 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 GEGPGEAGGPLT(1)PR;GEGPGEAGGPLT(1)PR;GEGPGEAGGPLT(1)PR 162.67 0.00064058 206731000 7383.3 7319.3 5948.5 4836 7527.8 7024.8 6585.5 4944.4 3507.06 4039.3 TRUE FALSE 6755.311564 6842.81224 5544.732393 5208.469558 7227.951786 7422.538105 6146.193311 4901.171632 3871.631437 4539.718979 1.488046197 1.507320667 1.221382297 1.147311008 1.592158417 1.635021493 1.353870876 1.07962005 0.852835044 1 12.14838728 -7.831444814 3.026385941 0.935309391 1.424919441 0.667008047 0.146594655 0.171200407 3.109728554 0.103289279 0.044828148 1.47E-08 7.831444814 0.489610049 GEGPGEAGGPLT(ph)PR ddPTM_A459_MK2206_30min_R2 3 GEGPGEAGGPLTPR 14 0 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 GEGPGEAGGPLT(1)PR;GEGPGEAGGPLT(1)PR;GEGPGEAGGPLT(1)PR 111.72 0.0089867 165315000 64967 97255 71046 89127 83584 115976 63361 48736 65133 49769 TRUE FALSE 69940.92347 92425.45812 73414.63818 81845.039 80302.07218 120389.5479 55041.62459 55105.96254 70798.15061 48145.04161 1.45271291 1.919729531 1.524863947 1.699968185 1.667919883 2.500559641 1.143245966 1.144582302 1.470518007 1 15.5550996 GEHGFIGCR ddPTM_A459_MK2206_30min_R1 3 GEHGFIGCR 9 0 Q16658;C9JPH9;C9JFC0;A0A0A0MSB2 Q16658;C9JPH9 FSCN1 Fascin 0 ;; 121.09 0.0089525 24711200 4092.8 3640 4327.3 3407.5 4598.3 3973.8 3919.9 3675.39 3717 3111.2 FALSE TRUE 3744.685868 3403.035338 4033.574933 3669.94624 4415.139974 4198.793122 3658.410623 3643.256453 4103.395451 3496.638944 1.070938672 0.973230406 1.153557744 1.049563967 1.262681119 1.200808316 1.046264908 1.041930983 1.173525639 1 11.77175312 -5.267216152 24.91614548 1.120937405 1.022084538 0.172983856 0.081616009 691.8797809 2984200.151 0.021687835 0.047175065 5.40E-06 5.267216152 -0.098852867 GEHGFIGCR ddPTM_A459_MK2206_30min_R2 2 GEHGFIGCR 9 0 Q16658;C9JPH9;C9JFC0;A0A0A0MSB2 Q16658;C9JPH9 FSCN1 Fascin 0 ; 115.7 0.0088207 2429500 4710.4 8293.1 9276.6 7596.5 8384.5 9254.5 11140.9 7070.6 8473.8 9448 FALSE TRUE 5071.031846 7881.276713 9585.877214 6975.84165 8055.282401 9606.686482 9678.086447 7994.751697 9210.835807 9139.712534 0.554834939 0.862311225 1.048816052 0.763245192 0.881349645 1.051092849 1.058904907 0.874726822 1.007781784 1 13.15793307 -4.793197639 3.290050157 0.953594092 0.505460286 0.640977508 0.091073842 0.204970082 3.510067864 0.023943685 0.232644167 1.61E-05 4.793197639 -0.448133807 GEIPS(ph)PQLTRPK ddPTM_A459_MK2206_30min_R2 1 GEIPSPQLTRPK 12 1 Q8IWZ3-6;H7C0V5 Q8IWZ3-6 ANKHD1;ANKHD1-EIF4EBP3 Ankyrin repeat and KH domain-containing protein 1 1 GEIPS(0.991)PQLT(0.009)RPK 71.316 0.033334 41696000 154310 137340 133510 145830 145140 131980 181010 154900 128080 171790 TRUE FALSE 166124.0922 130519.8953 137961.1568 133915.2225 139441.0743 137002.5914 157243.1696 175145.9619 139220.1669 166184.5064 0.999636464 0.785391479 0.830168587 0.805822549 0.839073855 0.824400507 0.946196327 1.053924735 0.837744564 1 17.34242636 -7.323299517 5.353937693 0.965951296 0.841561043 0.35110488 0.074413562 0.226569689 13.35701518 0.030285721 0.020318434 4.75E-08 7.323299517 -0.124390253 GEIQGLVS(ph)ALQEVR ddPTM_A459_MK2206_30min_R1 2 GEIQGLVSALQEVR 14 0 A0A590UK13 A0A590UK13 1 GEIQGLVS(1)ALQEVR;GEIQGLVS(1)ALQEVR 76.326 0.028084 38488000 3947.6 4094.5 4695.4 4427.3 5934.2 4207.8 4340.7 5711.3 3161.8 2242.09 TRUE FALSE 3611.83589 3827.947306 4376.68933 4768.291413 5697.828248 4446.042 4051.139823 5661.366706 3490.480425 2519.857036 1.433349527 1.519112891 1.736880016 1.892286485 2.261171236 1.764402478 1.607686375 2.246701549 1.385189864 1 11.29912617 -5.254016791 2.910382641 1.806657171 1.450851241 0.056574684 0.357589105 0.561265506 9.439739363 0.091312894 0.278675311 5.57E-06 5.254016791 -0.35580593 GELIPISPS(ph)TEVGGSGIGTPPSVLKR ddPTM_A459_MK2206_30min_R1 1 GELIPISPSTEVGGSGIGTPPSVLKR 26 1 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 GELIPIS(0.266)PS(0.351)T(0.351)EVGGS(0.027)GIGT(0.003)PPS(0.001)VLKR 46.878 0.026803 5525400 1063 1286.7 1161.8 1443.7 1348.7 1230.6 1093.9 1238.4 899.75 779.21 TRUE FALSE 972.586268 1202.935596 1082.940253 1554.894024 1294.978423 1300.275509 1020.927927 1227.572799 993.2822323 875.7444175 1.110582321 1.373614918 1.236593955 1.775511203 1.478717303 1.484765969 1.165782969 1.401747787 1.134214746 1 9.774366076 -8.393732588 1.038540644 0.998274226 1.405869715 0.333415429 0.179014138 0.61696217 1.4400612 0.175771283 0.058678001 4.04E-09 8.393732588 0.407595489 GELS(ph)EEELPYYVELPDR ddPTM_A459_MK2206_30min_R1 1 GELSEEELPYYVELPDR 17 0 Q9Y3R5-2;Q9Y3R5 Q9Y3R5-2 DOPEY2 Protein dopey-2 1 GELS(1)EEELPYYVELPDR 135.61 0.00051797 0 547.43 626.4 617.12 474.06 507.04 657.03 583.55 535.96 605.22 545.03 TRUE FALSE 500.8682038 585.6212461 575.2316138 510.5721833 486.8435231 694.2304708 544.6224442 531.2741582 668.1347848 612.5524312 0.817674012 0.956034482 0.939073269 0.833515888 0.794778534 1.133340487 0.889103392 0.867312137 1.090738932 1 9.258689526 -6.732754318 24.99958543 0.981119047 0.875102944 0.333242299 0.088929785 311.2393364 271250.4046 0.02985588 0.029850733 1.85E-07 6.732754318 -0.106016103 GELS(ph)PSFLNPPLPPSIDDR ddPTM_A459_MK2206_30min_R1 5 GELSPSFLNPPLPPSIDDR 19 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GELS(0.949)PS(0.051)FLNPPLPPSIDDR;GELS(0.994)PS(0.006)FLNPPLPPSIDDR;GELS(0.773)PS(0.226)FLNPPLPPSIDDR;GELS(0.994)PS(0.006)FLNPPLPPSIDDR;GELS(0.78)PS(0.22)FLNPPLPPSIDDR 177.12 7.99E-13 19927300 5821.97 5922.71 5502.94 4515.42 6577.66 6247.68 7353.43 5421.11 6012.8 5475.92 TRUE FALSE 5326.780879 5537.140502 5129.415765 4863.198431 6315.657874 6601.418242 6862.896102 5373.713807 6637.852077 6154.318311 0.865535484 0.8997163 0.833466114 0.790209116 1.026215668 1.072648165 1.115135057 0.8731615 1.078568209 1 12.58738335 -6.274195067 24.54106783 1.027906541 0.849997392 0.642348062 0.065928916 396.7520799 763322.2014 0.020825955 0.023774574 5.32E-07 6.274195067 -0.177909149 GELS(ph)PSFLNPPLPPSIDDR ddPTM_A459_MK2206_30min_R2 5 GELSPSFLNPPLPPSIDDR 19 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GELS(0.946)PS(0.053)FLNPPLPPS(0.001)IDDR;GELS(0.974)PS(0.026)FLNPPLPPSIDDR;GELS(0.974)PS(0.026)FLNPPLPPSIDDR;GELS(0.859)PS(0.141)FLNPPLPPSIDDR;GELS(0.892)PS(0.108)FLNPPLPPSIDDR 130.36 0.00028922 16372700 50973.1 57225.7 51246.9 56207.4 47028.7 53111.7 52656 39773.2 44651.6 51335.7 TRUE FALSE 54875.63973 54383.95495 52955.44607 51615.07562 45182.11694 55132.90296 45742.20395 44971.6938 48535.31546 49660.62031 1.105013175 1.095112276 1.066346851 1.03935624 0.909817812 1.110193602 0.921096105 0.905580589 0.977340097 1 15.59981466 -5.760934296 0.730606198 0.957998442 1.128919763 0.459464317 0.057076473 0.928115817 0.854626727 0.029303732 0.106852621 1.73E-06 5.760934296 0.170921321 GELS(ph)PSFLNPPLPPSIDDRDLSTEEVR ddPTM_A459_MK2206_30min_R2 1 GELSPSFLNPPLPPSIDDRDLSTEEVR 27 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GELS(0.545)PS(0.448)FLNPPLPPS(0.008)IDDRDLSTEEVR 76.796 7.27E-05 2695600 12181 19151 15904 16880 20149 15938 20492 13724 18794 12893 TRUE FALSE 13113.58673 18199.98919 16434.23142 15500.85 19357.84902 16544.53176 17801.37578 15517.77392 20428.66815 12472.30247 1.05141667 1.459232506 1.317658184 1.242821848 1.552066996 1.326501807 1.427272617 1.244178768 1.637922766 1 13.6064402 -4.750810373 24.72089658 1.366670832 1.051415904 0.222636872 0.169998763 550.2837102 1279749.449 0.038405996 0.534622946 1.77E-05 4.750810373 -0.315254928 GELSPS(ph)FLNPPLPPSIDDRDLSTEEVR ddPTM_A459_MK2206_30min_R1 1 GELSPSFLNPPLPPSIDDRDLSTEEVR 27 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GELS(0.164)PS(0.686)FLNPPLPPS(0.144)IDDRDLS(0.003)T(0.004)EEVR 81.406 5.14E-05 7913900 881.6 1070.6 1057 1154.6 1204.8 999.16 997.27 1160.7 803.38 549.27 TRUE FALSE 806.6152905 1000.903745 985.253785 1243.527492 1156.810265 1055.731576 930.7439379 1150.552122 886.8942259 617.3177144 1.306645301 1.621375383 1.596023833 2.014404355 1.87393013 1.71019161 1.507722711 1.863792494 1.436690063 1 9.269869381 -8.570526819 4.801603034 1.000162286 1.692355708 0.550461981 0.190789363 0.200541897 15.52048891 0.192100303 0.050016952 2.69E-09 8.570526819 0.692193422 GELSPSFLNPPLPPS(ph)IDDRDLSTEEVR ddPTM_A459_MK2206_30min_R1 1 GELSPSFLNPPLPPSIDDRDLSTEEVR 27 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GELSPS(0.001)FLNPPLPPS(0.997)IDDRDLS(0.001)T(0.001)EEVR 75.945 7.66E-05 7300500 1072 1201.2 965.8 1358.5 1306.8 731.54 1124.3 1080.4 757.11 596.18 TRUE FALSE 980.8207707 1123.001662 900.2441869 1463.131905 1254.747389 772.9591626 1049.299998 1070.954177 835.8142938 670.0392793 1.46382578 1.676023625 1.343569272 2.183650945 1.872647511 1.153602761 1.566027591 1.598345365 1.24741089 1 9.388101862 -6.756138963 24.99870864 1.366283296 1.712355288 0.338412969 0.270957784 183.5512411 865694.8049 0.093461515 0.090824475 1.75E-07 6.756138963 0.346071992 GELSPSFLNPPLPPS(ph)IDDRDLSTEEVR ddPTM_A459_MK2206_30min_R2 1 GELSPSFLNPPLPPSIDDRDLSTEEVR 27 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GELS(0.01)PS(0.004)FLNPPLPPS(0.848)IDDRDLS(0.069)T(0.069)EEVR 65.881 0.00067194 2571000 10918 20174 18610 19072 17361 18591 20205 12696 19286 14051 TRUE FALSE 11753.89047 19172.1885 19230.44811 17513.75659 16679.31991 19298.49353 17552.05923 14355.41079 20963.46142 13592.51702 0.864732445 1.410495824 1.414781978 1.288485169 1.227095753 1.419788072 1.29130309 1.056126012 1.542279578 1 13.73052501 -9.90555029 6.157677669 1.000000004 1.283921754 0.167166979 0.186887371 11574867.22 4137758.545 0.171460451 0.042865113 1.24E-10 9.90555029 0.283921751 GEMMDLQHGS(ph)LFLR ddPTM_A459_MK2206_30min_R1 2 GEMMDLQHGSLFLR 14 0 P00338;P00338-3;P00338-5;P00338-4;P00338-2;F5GYU2;F5GXY2;F5GXH2;F5H5J4;F5H6W8 P00338 LDHA L-lactate dehydrogenase A chain 1 GEMMDLQHGS(1)LFLR;GEMMDLQHGS(1)LFLR 104.16 0.0042212 4495300 2808.2 3113.2 2956.5 2268.07 2762.6 3352.8 3695.6 2674.1 2972.6 2968.2 TRUE FALSE 2569.347844 2910.530114 2755.821017 2442.757144 2652.559792 3542.632639 3449.073267 2650.720626 3281.612408 3335.923025 0.770205974 0.872481197 0.826104498 0.732258246 0.79515018 1.061964743 1.033918721 0.794598858 0.983719463 1 11.70387028 -6.739919406 24.8893556 0.965695178 0.801080168 0.577207692 0.074931374 187.9397212 217364.8953 0.026067144 0.026043729 1.82E-07 6.739919406 -0.164615011 GEMMDLQHGS(ph)LFLR ddPTM_A459_MK2206_30min_R2 1 GEMMDLQHGSLFLR 14 0 P00338;P00338-3;P00338-5;P00338-4;P00338-2;F5GYU2;F5GXY2;F5GXH2;F5H5J4;F5H6W8 P00338 LDHA L-lactate dehydrogenase A chain 1 GEMMDLQHGS(1)LFLR 78.228 0.025489 811910 8898.1 9824.2 8445.8 10095 10385 10312 9888.4 8644.3 6670.3 7356 TRUE FALSE 9579.345377 9336.344514 8727.378757 9270.206208 9977.23272 10704.43039 8590.041202 9774.13969 7250.470637 7115.974322 1.346174809 1.312026167 1.226448883 1.302731824 1.402089477 1.504281761 1.207148988 1.373549039 1.018900618 1 12.79684559 -8.267036905 24.3988978 1.009450204 1.332602668 0.723054384 0.080414221 189.2319041 824819.1759 0.073191023 0.021020899 5.41E-09 8.267036905 0.323152464 GEMMDLQHGSLFLR ddPTM_A459_MK2206_30min_R1 1 GEMMDLQHGSLFLR 14 0 P00338;P00338-3;P00338-5;P00338-4;P00338-2;F5GYU2;F5GXY2;F5GXH2;F5H5J4;F5H6W8 P00338 LDHA L-lactate dehydrogenase A chain 0 112.02 0.0052628 5827400 3175.1 2016.3 1799.6 1399.2 4839.3 5689.5 4904.1 2659.8 2267.4 2404.8 FALSE TRUE 2905.041072 1885.038504 1677.448166 1506.966626 4646.540434 6011.634573 4576.956437 2636.545649 2503.104344 2702.724779 1.074856417 0.697458549 0.620650752 0.557573097 1.719205917 2.224286623 1.693460049 0.975513922 0.926141042 1 11.40019889 -6.2579507 24.9843429 1.475454168 0.726408962 0.408639906 0.400921144 320.0876904 2292320.867 0.134101948 0.166206333 5.52E-07 6.2579507 -0.749045206 GEMMDLQHGSLFLR ddPTM_A459_MK2206_30min_R2 1 GEMMDLQHGSLFLR 14 0 P00338;P00338-3;P00338-5;P00338-4;P00338-2;F5GYU2;F5GXY2;F5GXH2;F5H5J4;F5H6W8 P00338 LDHA L-lactate dehydrogenase A chain 0 95.195 0.033687 0 5261.3 9899.3 5849 15125 14903 22629 13904 8869.6 13910 7097 FALSE TRUE 5664.109173 9407.715157 6044.002741 13889.23912 14317.83334 23490.16245 12078.3881 10028.88717 15119.86666 6865.425471 0.825019396 1.370303297 0.880353704 2.023070409 2.085498328 3.421515906 1.759306564 1.460781596 2.202320413 1 12.74513342 -5.769565214 24.01182783 2.066024539 1.059733225 0.34623101 0.603214928 117.6552729 347672.7719 0.172942361 0.261924528 1.70E-06 5.769565214 -1.006291314 GEPAAAAAPEAGAS(ph)PVEK ddPTM_A459_MK2206_30min_R1 4 GEPAAAAAPEAGASPVEK 18 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEPAAAAAPEAGAS(1)PVEK;GEPAAAAAPEAGAS(1)PVEK;GEPAAAAAPEAGAS(1)PVEK;GEPAAAAAPEAGAS(1)PVEK 220.82 1.98E-14 183549900 18344.5 19453 17693 11979.4 12724.4 13382.1 18214.6 13145.7 21320 22653 TRUE FALSE 16784.20394 18186.60616 16492.04846 12902.05546 12217.5602 14139.78294 16999.53727 13030.76853 23536.29029 25459.42466 0.659253073 0.714336887 0.647777736 0.506769326 0.479883594 0.555385015 0.667710975 0.511824941 0.924462772 1 14.6359122 -8.349448649 4.875606776 0.989367808 0.593626154 0.792123451 0.075892239 0.105737903 4.06658262 0.079962754 0.021031051 4.47E-09 8.349448649 -0.395741654 GEPAAAAAPEAGAS(ph)PVEK ddPTM_A459_MK2206_30min_R2 4 GEPAAAAAPEAGASPVEK 18 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEPAAAAAPEAGAS(1)PVEK;GEPAAAAAPEAGAS(1)PVEK;GEPAAAAAPEAGAS(1)PVEK;GEPAAAAAPEAGAS(1)PVEK 197 2.48E-10 291853000 570060 500993 473440 431606 365138 323070 458106 356429 308770 438788 TRUE FALSE 613704.2319 476114.4161 489224.2533 396342.4092 350800.8474 335364.6552 397956.1319 403015.4941 335626.2565 424470.3835 1.445811665 1.121666987 1.15255215 0.933733953 0.826443637 0.790077867 0.937535685 0.94945492 0.790694167 1 18.69530437 -4.761407713 0.833404527 0.875642238 1.745024894 0.809641622 0.083400603 1.05862467 0.552782487 0.031556389 0.86031694 1.73E-05 4.761407713 0.869382655 GEPNVS(ph)YICSR ddPTM_A459_MK2206_30min_R2 1 GEPNVSYICSR 11 0 P49841;P49841-2;A0A3B3ITW1;A8MT37;P49840 P49841;P49840 GSK3B;GSK3A Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha 1 GEPNVS(0.963)Y(0.037)ICSR 166.86 0.00057022 580690000 225410 200320 204290 178540 186150 171720 248390 164790 175640 189540 TRUE FALSE 242667.5629 190372.4001 211100.9266 163952.7109 178840.8157 178254.9249 215776.0946 186328.6188 190916.8497 183355.3253 1.323482492 1.038270363 1.151321492 0.894180251 0.975378355 0.972182971 1.176819349 1.016216019 1.041239732 1 17.48428264 GEPNVSY(ph)ICSR ddPTM_A459_MK2206_30min_R1 5 GEPNVSYICSR 11 0 P49841;P49841-2;A0A3B3ITW1;A8MT37;P49840 P49841;P49840 GSK3B;GSK3A Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha 1 GEPNVS(0.001)Y(0.999)ICSR;GEPNVS(0.061)Y(0.939)ICSR;GEPNVS(0.132)Y(0.868)ICSR;GEPNVS(0.003)Y(0.997)ICSR;GEPNVS(0.125)Y(0.875)ICSR 217.02 0.00025998 1303081000 13040.4 11247.5 12764.2 10452 13013.2 11318 12393 11817.3 10703.6 9909.8 TRUE FALSE 11931.2455 10515.28571 11897.80167 11257.01485 12494.85669 11958.81538 11566.28558 11713.98259 11816.27752 11137.50084 1.071267753 0.944133326 1.06826494 1.010730775 1.12187257 1.073743163 1.038499188 1.051760423 1.060945152 1 13.44313792 GEPNVSY(ph)ICSR ddPTM_A459_MK2206_30min_R2 3 GEPNVSYICSR 11 0 P49841;P49841-2;A0A3B3ITW1;A8MT37;P49840 P49841;P49840 GSK3B;GSK3A Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha 1 GEPNVS(0.015)Y(0.985)ICSR;GEPNVS(0.012)Y(0.988)ICSR;GEPNVS(0.015)Y(0.985)ICSR 190.26 0.00027662 896760000 287275 383758 331740 385789 331562 332909 380013 334313 326741 308077 TRUE FALSE 309268.9949 364701.1358 342800.046 354268.8046 318543.2099 345578.0853 330116.8366 378008.857 355160.3416 298024.4727 1.037730197 1.223728818 1.150241263 1.18872387 1.068849169 1.159562777 1.107683653 1.268381934 1.191715359 1 18.18507128 GEPPAAS(ph)PEASTCQSK ddPTM_A459_MK2206_30min_R2 4 GEPPAASPEASTCQSK 16 0 Q7Z333-3;Q7Z333;Q7Z333-4;X6RI79 Q7Z333-3 SETX Probable helicase senataxin 1 GEPPAAS(0.999)PEAS(0.001)TCQSK;GEPPAAS(0.977)PEAS(0.022)T(0.001)CQSK;GEPPAAS(1)PEASTCQSK;GEPPAAS(1)PEASTCQSK 222.64 1.65E-20 12763400 63890 71758 66744 70975 68739 64789 83289 52358 57109 67821 TRUE FALSE 68781.46752 68194.60207 68969.21165 65176.11546 66039.96147 67254.59079 72353.05425 59201.37037 62076.23759 65608.00632 1.048370029 1.039425001 1.051231633 0.993417101 1.006583879 1.02509731 1.102808305 0.902349785 0.946168632 1 16.00158426 -7.771818598 24.99999919 0.943194407 1.035252108 0.56451298 0.035479374 152.7416984 367897.0413 0.019106349 0.009336984 1.69E-08 7.771818598 0.092057701 GEPPAPKS(ph)PPK ddPTM_A459_MK2206_30min_R2 1 GEPPAPKSPPK 11 1 O95466;O95466-2;O95466-3;K7EK60;K7ERL1;K7EJE6 O95466 FMNL1 Formin-like protein 1 1 GEPPAPKS(1)PPK 67.234 0.041459 11314000 64291 55533 62284 47935 54637 36758 75116 52193 38095 68013 TRUE FALSE 69213.16839 52775.31197 64360.51747 44018.55716 52491.67685 38156.85145 65253.17897 59014.80431 41408.43424 65793.74138 1.051971919 0.802132708 0.97821641 0.669038669 0.797821734 0.579946521 0.991783984 0.89696684 0.629367374 1 16.00566273 -1.880694522 1.102850386 0.801676679 199.1034392 0.183022043 0.145843389 2259.089987 4.548578629 0.044266942 1131000.984 0.013161503 1.880694522 198.3017625 GEQVS(ph)QNGLPAEQGS(ph)PR ddPTM_A459_MK2206_30min_R2 1 GEQVSQNGLPAEQGSPR 17 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 2 GEQVS(1)QNGLPAEQGS(1)PR 160.02 0.00051283 5204200 19883 20362 25743 25439 24322 23011 26427 18283 19883 22429 TRUE FALSE 21405.25777 19350.85269 26601.25877 23360.55232 23366.99607 23886.69973 22957.10316 20672.65087 21612.3874 21697.14357 0.986547271 0.891861762 1.226025845 1.076664873 1.076961859 1.100914489 1.058070298 0.95278214 0.996093672 1 14.4052175 -10.1628568 6.768661963 1 1.043560232 0.018295839 0.087041357 0 0 0.088315397 0.02141963 6.87E-11 10.1628568 0.043560232 GEQVSQNGLPAEQGS(ph)PR ddPTM_A459_MK2206_30min_R1 3 GEQVSQNGLPAEQGSPR 17 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR 324.39 5.80E-119 431397000 11442.3 11406.1 11650.6 8003.2 10005.1 9889.9 12324.2 9896.6 12254.6 14079.1 TRUE FALSE 10469.0723 10663.56082 10859.78973 8619.607851 9606.575681 10449.85759 11502.0751 9810.07507 13528.50952 15823.3252 0.661622773 0.673914028 0.686315272 0.544740612 0.607114848 0.660408445 0.726906321 0.619975571 0.854972602 1 13.94976519 -8.460082954 2.85212919 0.999114938 0.647478451 0.854819643 0.047842008 0.088369532 1.532710785 0.048903852 0.013160126 3.47E-09 8.460082954 -0.351636487 GEQVSQNGLPAEQGS(ph)PR ddPTM_A459_MK2206_30min_R2 4 GEQVSQNGLPAEQGSPR 17 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR 321.6 1.13E-118 557014400 101657 93792 93965 103132 82081 80005 88473 78424 78750 88362 TRUE FALSE 109439.9381 89134.42567 97097.7462 94705.7857 78858.08752 83049.64634 76856.38882 88674.28607 85599.53265 85478.75518 1.280317406 1.042767007 1.135928407 1.107945308 0.922546045 0.971582309 0.899128546 1.037383919 1.001412953 1 16.38327828 -1.522878758 0.478111771 0.972309084 8.679017241 0.644423468 0.063386641 65.34251515 0.735852356 0.038467054 499.9363346 0.029999999 1.522878758 7.706708157 GES(ph)DDFHMDFDSAVAPR ddPTM_A459_MK2206_30min_R1 1 GESDDFHMDFDSAVAPR 17 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GES(1)DDFHMDFDSAVAPR 120.54 0.00096741 1556200 628.65 574.81 549.64 442.48 420.32 578.21 616.56 405.22 439.29 499.78 TRUE FALSE 575.1800163 537.3897645 512.3319682 476.5598863 403.5777644 610.9477505 575.4304074 401.6772043 484.9557675 561.6965195 1.02400495 0.956726178 0.912115262 0.84842948 0.71849789 1.087682991 1.024450726 0.715114284 0.863376843 1 9.133647053 -5.009871393 2.054494319 0.888601352 1.031226287 0.109220871 0.114943349 1.063217449 6.988707268 0.032990399 0.239778604 9.78E-06 5.009871393 0.142624934 GES(ph)ENAGTNQETR ddPTM_A459_MK2206_30min_R1 2 GESENAGTNQETR 13 0 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 GES(0.975)ENAGT(0.025)NQETR;GES(0.967)ENAGT(0.033)NQETR 181.75 0.00010981 7770300 716.65 767.08 602.84 421.552 730.44 684.42 777.96 553.95 701.55 871.54 TRUE FALSE 655.6951542 717.1429526 561.9209004 454.0200081 701.3450281 723.1712689 726.0637079 549.1068736 774.478633 979.512955 0.669409374 0.732142387 0.573673781 0.463516083 0.71601404 0.738296788 0.741249724 0.560591742 0.790677274 1 9.935920763 -9.884098082 0.424597464 1.073974157 0.634356913 0.568228118 0.091737578 5.622666888 1.036564171 0.714370093 0.060515335 1.31E-10 9.884098082 -0.439617245 GES(ph)ENAGTNQETR ddPTM_A459_MK2206_30min_R2 3 GESENAGTNQETR 13 0 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 GES(0.999)ENAGTNQET(0.001)R;GES(1)ENAGTNQETR;GES(1)ENAGTNQETR 123.68 0.002407 10357000 5765.02 8149.15 6756.65 7223.68 6550.19 7247 8347.23 6324.27 6873.52 5670.98 TRUE FALSE 6206.394364 7744.475061 6981.913339 6633.482237 6292.996629 7522.789663 7251.228674 7150.873803 7471.366345 5485.936387 1.131328168 1.411696111 1.272693091 1.209179576 1.1471144 1.371286346 1.321785045 1.303491929 1.361912683 1 12.42152218 -10.63630697 4.83872135 0.999985472 1.28319731 0.472024806 0.08918541 1.39E-05 2.55E-06 0.086145616 0.02089231 2.31E-11 10.63630697 0.283211838 GESAAATASLFQR ddPTM_A459_MK2206_30min_R1 1 GESAAATASLFQR 13 0 H3BV60 H3BV60 TGFBR3L Transforming growth factor-beta receptor type 3-like protein 0 128.86 0.02471 194350000 2376.2 2389 2402.7 1592.6 2181 2155.6 2535.9 1994.4 2182.3 2179.1 FALSE TRUE 2174.091712 2233.475666 2239.611418 1715.262328 2094.126152 2277.648209 2366.734738 1976.963171 2409.157894 2449.063359 0.887723751 0.911971369 0.914476716 0.700374828 0.855072264 0.930007874 0.966383629 0.80723235 0.983705826 1 11.25801438 -6.754275567 9.827274509 0.927254961 0.851932538 0.231274926 0.074965974 0.271253145 284.9611751 0.026155662 0.025041037 1.76E-07 6.754275567 -0.075322423 GESAADS(ph)DGWDSAPSDLR ddPTM_A459_MK2206_30min_R2 4 GESAADSDGWDSAPSDLR 18 0 I3L0Y2;I3L4Q4;Q9BUL5-4;Q9BUL5;A0A087WVQ2;Q9BUL5-2 I3L0Y2 PHF23 PHD finger protein 23 1 GESAADS(1)DGWDSAPSDLR;GESAADS(1)DGWDSAPSDLR;GESAADS(0.999)DGWDS(0.001)APSDLR;GESAADS(1)DGWDSAPSDLR 333.65 1.83E-144 19866600 42363.8 38898.5 33486.1 42778.4 38167.9 37245.3 41876.7 33441.7 32489.1 38155 TRUE FALSE 45607.2051 36966.85705 34602.50986 39283.26788 36669.23647 38662.69599 36378.23899 37812.64501 35314.94319 36910.00547 1.235632575 1.001540276 0.937483195 1.06429862 0.993476863 1.047485512 0.985592891 1.024455145 0.956785098 1 15.17172433 -4.761267289 24.96149591 1.002692016 1.235632835 0.791496799 0.036084586 1.686148779 243869.4394 0.008583132 0.048245313 1.73E-05 4.761267289 0.232940819 GESAPTLSTSPSPSSPSPT(ph)SPSPTLGR ddPTM_A459_MK2206_30min_R2 1 GESAPTLSTSPSPSSPSPTSPSPTLGR 27 0 F8WBJ7;Q9H330-4;Q9H330 F8WBJ7 TMEM245 Transmembrane protein 245 1 GESAPTLSTSPSPSS(0.004)PS(0.25)PT(0.368)S(0.368)PS(0.008)PT(0.003)LGR 203.53 3.91E-42 0 14496 7569.1 8843.3 9917.2 7351.4 10383 14576 10830 13028 9982.7 TRUE FALSE 15605.82491 7193.229501 9138.131208 9106.933036 7062.747098 10778.13234 12662.15369 12245.51818 14161.15189 9656.965317 1.616017496 0.744874737 0.946273587 0.943042948 0.731362997 1.116099311 1.311193866 1.268050343 1.466418427 1 13.23735418 -7.001482295 24.92652299 1.273737991 0.971318433 0.192517755 0.252866075 78.65525992 1322704.237 0.087199868 0.075851612 9.97E-08 7.001482295 -0.302419558 GESDEPAPQVQPES(ph)PETVSPK ddPTM_A459_MK2206_30min_R2 1 GESDEPAPQVQPESPETVSPK 21 0 A0A1B0GTL5 A0A1B0GTL5 1 GESDEPAPQVQPES(0.979)PET(0.019)VS(0.002)PK 98.924 0.00089533 0 35525 40090 35516 45689 41037 35860 36200 33910 32989 39060 TRUE FALSE 38244.82131 38099.1889 36700.08571 41956.06255 39425.68119 37224.67743 31446.89652 38342.15343 35858.32359 37785.4754 1.01215668 1.008302489 0.97127495 1.110375405 1.043408367 0.985158372 0.83224827 1.014732593 0.94899755 1 15.20554415 -6.999021463 18.48092182 0.944291181 1.027754222 0.310950438 0.056146329 1.486252171 28022.45019 0.020188627 0.017519907 1.00E-07 6.999021463 0.083463041 GESPVDYDGGR ddPTM_A459_MK2206_30min_R1 2 GESPVDYDGGR 11 0 Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 Q15084-3 PDIA6 Protein disulfide-isomerase A6 0 ; 180.09 0.00068902 26057000 7853.8 7762.6 7527.7 6570.1 7390.3 6972.3 7967.8 6245.8 6215.5 6117.8 FALSE TRUE 7185.793068 7257.253329 7016.740697 7076.13024 7095.928702 7367.065601 7436.2826 6191.193629 6861.623467 6875.719251 1.045096928 1.055490061 1.020510065 1.02914764 1.032027115 1.071461084 1.081527958 0.900443052 0.997949919 1 12.74729492 -7.750146824 24.9999972 0.961897352 1.046708405 0.591708331 0.031053716 135.1857983 299282.2664 0.014493905 0.008271377 1.78E-08 7.750146824 0.084811054 GESPVDYDGGR ddPTM_A459_MK2206_30min_R2 2 GESPVDYDGGR 11 0 Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 Q15084-3 PDIA6 Protein disulfide-isomerase A6 0 ; 142 0.01327 51947000 128064 159516 133007 166419 174636 168575 158680 144881 132439 161473 FALSE TRUE 137868.6783 151594.6674 137441.387 152822.0354 167778.9132 174990.2398 137845.1254 163817.4442 143958.3048 156204.1492 0.882618541 0.970490657 0.879883074 0.978348118 1.074100233 1.120266271 0.882467758 1.04873939 0.921603591 1 17.25307325 -5.953629218 6.546568748 1.011135432 0.918018727 0.280951229 0.068891751 0.266987814 27.48199553 0.019580316 0.029066846 1.11E-06 5.953629218 -0.093116705 GESQNTDLSPKPLIS(ph)EQTVILGK ddPTM_A459_MK2206_30min_R1 1 GESQNTDLSPKPLISEQTVILGK 23 1 E9PPG5;E9PL28;P15622-2;P15622-3;P15622 E9PPG5 ZNF250 Zinc finger protein 250 1 GES(0.018)QNT(0.019)DLS(0.108)PKPLIS(0.746)EQT(0.11)VILGK 44.541 0.04566 6302600 1536.4 1624.2 1782.3 1451.4 1220.2 1149.3 1211.3 1303.5 1433.1 1575 TRUE FALSE 1405.721112 1518.464285 1661.322442 1563.187079 1171.59685 1214.372373 1130.496387 1292.103637 1582.075873 1770.122891 0.794137582 0.857829868 0.938535087 0.883095229 0.661873171 0.686038455 0.638654182 0.729951374 0.893766123 1 10.78963381 -4.456114517 20.27085292 0.795863075 0.755225738 0 0.119220492 1872188.415 2466892.655 0.030812074 3415141.937 3.50E-05 4.456114517 -0.040637337 GESS(ph)SPSPSAEK ddPTM_A459_MK2206_30min_R2 1 GESSSPSPSAEK 12 0 E9PHV5;P28290-3;P28290;P28290-2 E9PHV5 SSFA2 Sperm-specific antigen 2 1 GES(0.023)S(0.492)S(0.2)PS(0.2)PS(0.084)AEK 90.861 0.02383 3736900 19137 20329 17055 20541 16361 12740 15319 13758 15415 14945 TRUE FALSE 20602.14343 19319.49142 17623.60519 18862.73459 15718.58493 13224.82963 13307.5969 15556.21784 16755.76884 14457.34587 1.425029436 1.336309693 1.219006956 1.304716285 1.087238631 0.914748097 0.920473026 1.076007863 1.158979593 1 13.8195151 -6.321822552 3.128543111 1.011525836 1.319898931 0.763564451 0.081181541 0.137760118 2.676519626 0.0288614 0.034414042 4.77E-07 6.321822552 0.308373095 GESSSPS(ph)PSAEK ddPTM_A459_MK2206_30min_R1 1 GESSSPSPSAEK 12 0 E9PHV5;P28290-3;P28290;P28290-2 E9PHV5 SSFA2 Sperm-specific antigen 2 1 GESS(0.008)S(0.008)PS(0.983)PSAEK 177.36 0.00010365 5820800 3505.2 3266.9 2867 2608.1 2691.2 2398.4 2806.5 2007.9 1909.5 2503.7 TRUE FALSE 3207.064333 3054.224216 2672.396028 2808.976314 2584.003805 2534.195335 2619.283506 1990.345142 2107.999358 2813.877258 1.139731424 1.085414869 0.949720184 0.998258295 0.918307221 0.900606211 0.930844975 0.707331898 0.749144033 1 11.45834368 -5.434800674 0.524066259 0.823616618 1.225782234 0.573415887 0.082809246 1.669218054 0.568232537 0.057104947 0.381104443 3.67E-06 5.434800674 0.402165616 GEVISSGSKPLS(ph)PGPCLDIPSILSNK ddPTM_A459_MK2206_30min_R1 2 GEVISSGSKPLSPGPCLDIPSILSNK 26 1 Q8TEP8-1;H0Y966;A0A0A0MR42;K7ENP4;Q8TEP8;K7EPA2;Q8TEP8-2;C9JT09 Q8TEP8-1 CEP192 Centrosomal protein of 192 kDa 1 GEVIS(0.001)S(0.001)GS(0.001)KPLS(0.997)PGPCLDIPSILSNK;GEVISS(0.001)GS(0.001)KPLS(0.998)PGPCLDIPSILSNK 80.868 7.53E-05 25294000 5086.1 4594.4 4685.6 4060.6 4253.8 3599.8 3432.8 3865.9 3848.9 4052.8 TRUE FALSE 4653.500487 4295.303725 4367.554527 4373.348116 4084.362138 3803.617565 3203.804175 3832.100844 4249.006928 4554.891461 1.02164904 0.943009018 0.958871263 0.960143212 0.896698016 0.835062174 0.703376623 0.841315512 0.932844825 1 12.15320096 -6.426640879 2.622998909 0.843416216 0.969437099 0.303466473 0.074777302 0.319681066 4.301682186 0.025899847 0.029397184 3.74E-07 6.426640879 0.126020883 GEVISSGSKPLS(ph)PGPCLDIPSILSNK ddPTM_A459_MK2206_30min_R2 2 GEVISSGSKPLSPGPCLDIPSILSNK 26 1 Q8TEP8-1;H0Y966;A0A0A0MR42;K7ENP4;Q8TEP8;K7EPA2;Q8TEP8-2;C9JT09 Q8TEP8-1 CEP192 Centrosomal protein of 192 kDa 1 GEVISS(0.001)GS(0.002)KPLS(0.996)PGPCLDIPSILSNK;GEVIS(0.003)S(0.002)GS(0.003)KPLS(0.992)PGPCLDIPSILSNK 92.886 1.03E-05 13565100 43718 51757 49004 44359 46177 37524 49480 38045 35499 43247 TRUE FALSE 47065.08369 49186.82264 50637.7689 40734.7278 44363.85896 38952.00211 42983.21656 43017.61213 38586.63885 41835.85393 1.124993977 1.17570978 1.210391665 0.973679846 1.060426758 0.931067457 1.027425343 1.028247498 0.9223342 1 15.35245226 -5.765066128 24.99950672 0.994862916 1.17089962 0.769951496 0.044686638 40.48505878 279070.0192 0.012104102 0.01877295 1.72E-06 5.765066128 0.176036704 GEVPGGSAHYGGPS(ph)PEK ddPTM_A459_MK2206_30min_R1 1 GEVPGGSAHYGGPSPEK 17 0 J3KS37;O94762-4;O94762 J3KS37 RECQL5 ATP-dependent DNA helicase Q5 1 GEVPGGSAHYGGPS(1)PEK 99.813 0.0046371 2846500 1512.5 1045.1 1377.6 1099.3 1552.2 1380 1508 1524 1296.5 1087.2 TRUE FALSE 1383.853933 977.0638 1284.09235 1183.968276 1490.372587 1458.134407 1407.404072 1510.675829 1431.275815 1221.890544 1.132551471 0.799632835 1.050906202 0.968964268 1.219726754 1.193342902 1.151824997 1.236343006 1.171361724 1 10.25489934 -6.255146238 24.6886553 1.174965454 0.979050227 0.420839826 0.099140371 358.6045063 1406841.812 0.02762184 0.034766862 5.56E-07 6.255146238 -0.195915227 GEVPGGSAHYGGPS(ph)PEKK ddPTM_A459_MK2206_30min_R1 2 GEVPGGSAHYGGPSPEKK 18 1 J3KS37;O94762-4;O94762 J3KS37 RECQL5 ATP-dependent DNA helicase Q5 1 GEVPGGSAHY(0.009)GGPS(0.99)PEKK;GEVPGGS(0.002)AHY(0.055)GGPS(0.943)PEKK 117.37 0.0005239 27722000 4195.7 2998.5 3785.4 2828.7 3694.8 3143.2 3889.3 3404 2919.1 2747.8 TRUE FALSE 3838.833683 2803.297105 3528.457595 3046.566964 3547.628292 3321.165268 3629.851893 3374.239187 3222.550891 3088.218209 1.243057784 0.907739323 1.142554495 0.986512856 1.148762183 1.075430894 1.175387116 1.092616829 1.043498443 1 11.59255898 -4.681882721 23.38191199 1.073086621 1.243089636 0.31085735 0.079029586 76307.13261 22413850.49 0.018625788 400.8495933 2.08E-05 4.681882721 0.170003015 GEVPGGSAHYGGPS(ph)PEKK ddPTM_A459_MK2206_30min_R2 4 GEVPGGSAHYGGPSPEKK 18 1 J3KS37;O94762-4;O94762 J3KS37 RECQL5 ATP-dependent DNA helicase Q5 1 GEVPGGSAHYGGPS(1)PEKK;GEVPGGSAHYGGPS(1)PEKK;GEVPGGSAHYGGPS(1)PEKK;GEVPGGSAHY(0.013)GGPS(0.987)PEKK 125.35 0.00042605 60834000 111678.1 164258 140715 178691 165424 121429.4 186650 140050 129881 163688 TRUE FALSE 120228.2612 156101.1866 145406.3679 164091.3737 158928.6226 126050.4809 162142.6308 158355.0159 141177.8146 158346.874 0.759271454 0.985817924 0.918277477 1.036277948 1.003673888 0.796040223 1.023971151 1.000051418 0.891573108 1 17.27272886 -4.757102014 24.99862609 0.960791929 0.759271156 0.429605915 0.069982393 126.8884989 731234.5744 0.017177845 0.131116868 1.75E-05 4.757102014 -0.201520773 GEVRPELGSR ddPTM_A459_MK2206_30min_R2 1 GEVRPELGSR 10 1 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 0 107.21 0.032216 3827600 9417 13084 12369 14527 12530 16890 16527 10622 13730 10901 FALSE TRUE 10137.97276 12434.26759 12781.37629 13340.09763 12038.00924 17532.76079 14356.98505 12010.33187 14924.21058 10545.30126 0.96137346 1.179128721 1.212044679 1.265027646 1.141551952 1.662613552 1.361458027 1.138927336 1.415247437 1 13.36431269 -3.948655172 0.79844324 1.307137945 1.47E-09 0.23645307 0.171215232 11.56830541 2.140178236 0.062059854 18.3566562 0.00011255 3.948655172 -1.307137943 GFAFVQYVNER ddPTM_A459_MK2206_30min_R1 1 GFAFVQYVNER 11 0 B4DY08;G3V4W0;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V4M8;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V576;G3V555;G3V575 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 157.75 0.0078155 14894000 1608.2 1462.3 1684 1542.7 1446.7 1382.7 1408.7 1492.4 1125.3 1285.3 FALSE TRUE 1471.414145 1367.104004 1569.694772 1661.519021 1389.074876 1460.987279 1314.728193 1479.352104 1242.278962 1444.532668 1.018609117 0.946398815 1.086645396 1.150212147 0.961608489 1.011390958 0.910140852 1.024104292 0.859986755 1 10.49638711 -6.412942486 23.17852441 0.962343195 1.046906392 0.302312744 0.066328576 20.5657679 4313.38869 0.02094657 0.023751164 3.86E-07 6.412942486 0.084563196 GFAFVQYVNER ddPTM_A459_MK2206_30min_R2 2 GFAFVQYVNER 11 0 B4DY08;G3V4W0;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V4M8;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V576;G3V555;G3V575 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 ; 146.11 0.009557 15654300 51549 65951 60418 64558 57362 67512 59559 37895 59419 60427 FALSE TRUE 55495.63107 62675.96924 62432.30597 59283.40489 55109.67966 70081.21647 51738.83176 42848.00661 64587.15722 58455.27194 0.949369137 1.072203878 1.068035506 1.014166951 0.942766629 1.198886159 0.885101207 0.733005 1.104898755 1 15.83504552 GFAFVTFDDHDSVDK ddPTM_A459_MK2206_30min_R1 1 GFAFVTFDDHDSVDK 15 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8VZ49;Q32P51;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1;HNRNPA1L2 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2" 0 171.26 6.61E-05 13126000 7341.7 3471.3 4572.6 2686.1 8615 8221.6 8993.5 5357.6 3318.4 3630.1 FALSE TRUE 6717.249862 3245.317739 4262.224652 2892.983887 8271.846307 8687.099887 8393.560025 5310.759068 3663.359555 4079.824194 1.646455715 0.79545529 1.044707921 0.709095233 2.027500675 2.129282899 2.057333754 1.301712725 0.897920935 1 11.99429127 -6.257425191 24.96105688 1.636479115 1.030521843 0.222021472 0.466225464 487.8643739 3033639.365 0.147256093 0.183089082 5.53E-07 6.257425191 -0.605957273 GFAFVTFDDHDSVDK ddPTM_A459_MK2206_30min_R2 1 GFAFVTFDDHDSVDK 15 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8VZ49;Q32P51;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1;HNRNPA1L2 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2" 0 174.95 3.11E-05 4258500 11880 23137 20344 31008 35594 32044 37435 23317 25776 19156 FALSE TRUE 12789.54193 21988.05022 21022.25881 28474.54721 34196.40071 33263.45687 32519.73953 26364.61196 28017.94989 18530.94129 0.690172276 1.186558733 1.134440959 1.536594756 1.845367711 1.795022517 1.754888703 1.422734633 1.51195503 1 14.17764855 -5.237039015 1.241396322 1.600716089 0.702760318 0.520134299 0.248849675 0.566922095 1.260373818 0.079047423 0.53095303 5.79E-06 5.237039015 -0.897955771 GFAFVTFDDHDTVDK ddPTM_A459_MK2206_30min_R1 2 GFAFVTFDDHDTVDK 15 0 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ; 209.11 2.07E-06 25009000 7798.3 6823.3 7290.4 5827.2 7507.7 6960.7 7610.5 6751.4 6050.2 6869.7 FALSE TRUE 7135.013634 6379.10193 6795.54796 6276.011954 7208.652411 7354.808819 7102.817431 6692.373222 6679.139941 7720.7703 0.924132354 0.8262261 0.880164504 0.812873808 0.933670104 0.952600393 0.919962278 0.866801234 0.865087249 1 12.91452908 -6.282237702 24.84154739 0.917686386 0.859755773 0.297467181 0.046361802 1041.021051 1243393.629 0.014416497 0.016367084 5.22E-07 6.282237702 -0.057930613 GFCFLEYEDHK ddPTM_A459_MK2206_30min_R1 2 GFCFLEYEDHK 11 0 O43390;B4DT28;O43390-4;O43390-3;O43390-2;O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5 O43390;O60506-2 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q 0 ; 161.67 0.00086448 33066000 8264.5 8945.1 8812.1 7759.5 7772.4 7355.5 6991 7265.8 6858.5 6232.5 FALSE TRUE 7561.560876 8362.772364 8213.959204 8357.138034 7462.80885 7771.962054 6524.643146 7202.275877 7571.465618 7004.629153 1.079509095 1.193892236 1.172647263 1.193087864 1.065410986 1.109546542 0.931475886 1.028216586 1.080923123 1 12.77409296 -6.688779414 1.729674916 1.01663283 1.16105779 0.577044395 0.052943622 0.250402019 1.547021293 0.021554476 0.020781383 2.05E-07 6.688779414 0.14442496 GFCFLEYEDHK ddPTM_A459_MK2206_30min_R2 1 GFCFLEYEDHK 11 0 O43390;B4DT28;O43390-4;O43390-3;O43390-2;O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5 O43390;O60506-2 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q 0 133.42 0.0025627 4281500 50311 55291 49207 54211 47016 47460 62756 44755 48357 50399 FALSE TRUE 54162.84884 52545.32934 50847.53682 49781.78789 45169.9156 49266.12356 54516.06182 50604.63217 52563.00445 48754.48476 1.110930597 1.077753762 1.042930452 1.021070946 0.92647714 1.010494189 1.118175325 1.037948251 1.078116295 1 15.57324731 -5.116722748 2.117984949 1.028309222 1.110986906 0.24977903 0.047197598 0.621178735 4.763202403 0.014294322 0.074582003 7.64E-06 5.116722748 0.082677683 GFDNPEENS(ph)SEFPVTFK ddPTM_A459_MK2206_30min_R1 1 GFDNPEENSSEFPVTFK 17 0 Q8IWI9;Q8IWI9-3;H3BU53 Q8IWI9 MGA MAX gene-associated protein 1 GFDNPEENS(0.976)S(0.024)EFPVTFK 141.22 0.00050192 2438500 248.87 283.83 231.21 384.29 294.14 345.65 292.31 253.63 327.28 245.56 TRUE FALSE 227.7022996 265.3526154 215.5161094 413.8880824 282.4237809 365.2204043 272.8105332 251.4125396 361.3019272 275.9818267 0.825062659 0.961485829 0.780906888 1.499693249 1.023341951 1.323349471 0.98850905 0.910974982 1.309151155 1 8.108429459 GFDNPEENS(ph)SEFPVTFKEESK ddPTM_A459_MK2206_30min_R1 1 GFDNPEENSSEFPVTFKEESK 21 1 Q8IWI9;Q8IWI9-3;H3BU53 Q8IWI9 MGA MAX gene-associated protein 1 GFDNPEENS(0.862)S(0.138)EFPVTFKEESK 89.829 0.00042935 3476900 921.98 1024 905.62 831.89 840.84 718.47 820.39 717.44 813.9 458.97 TRUE FALSE 843.5607595 957.3374139 844.1490376 895.9623119 807.3475623 759.1491505 765.66328 711.1674977 898.5078176 515.8306686 1.635344331 1.855914105 1.636484779 1.736931064 1.565140678 1.47170224 1.484330666 1.378684016 1.741865833 1 9.010753741 -12.21672263 0.138667445 2.30E-14 1.878830513 0.685381989 0.12822854 36.2599964 0.578747565 12.282156 0.926923462 6.07E-13 12.21672263 1.878830513 GFDQTINLILDESHER ddPTM_A459_MK2206_30min_R1 1 GFDQTINLILDESHER 16 0 F2Z2Y6;C9JIZ0;C9JNV3;O95777 F2Z2Y6 LSM8 U6 snRNA-associated Sm-like protein LSm8 0 95.197 0.026837 0 1393.2 1196.5 832.76 1201.3 1390.2 1399.9 1028.9 1205.9 1035.6 976.01 FALSE TRUE 1274.701024 1118.607633 776.2345714 1293.824334 1334.82539 1479.161128 960.2639583 1195.356943 1143.254326 1096.925487 1.162067104 1.019766288 0.70764567 1.179500658 1.216878818 1.348460899 0.875414027 1.089733949 1.042235174 1 10.09924981 -4.747179609 23.49156816 1.058016895 1.162067684 0.035179092 0.169275234 1641.824367 2704400.268 0.044517256 0.847966774 1.79E-05 4.747179609 0.10405079 GFEGSCS(ph)QK ddPTM_A459_MK2206_30min_R2 1 GFEGSCSQK 9 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 GFEGS(0.013)CS(0.987)QK 93.561 0.024405 4036900 43723 28168 31010 27290 23009 25016 29799 26668 20667 33814 TRUE FALSE 47070.4665 26769.21808 32043.85792 25060.3197 22105.55105 25968.00141 25886.3555 30153.59916 22464.5783 32710.65195 1.438995058 0.818363942 0.979615386 0.766121071 0.675790598 0.793869882 0.791373879 0.921828131 0.68676645 1 14.99747289 -2.817712296 1.464345162 0.808245301 199.9995857 0.730927981 0.10992742 214.8868934 1.925942736 0.029770321 142427.3811 0.001521555 2.817712296 199.1913404 GFFDPNTHENLTYLQLLER ddPTM_A459_MK2206_30min_R1 1 GFFDPNTHENLTYLQLLER 19 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;A0A075B730;P58107;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC;EPPK1 Plectin;Epiplakin 0 140.3 0.00016891 7464000 1737.1 1885 1743.1 1364.6 1881.2 1474.9 1667.9 1836.7 1349 1552.3 FALSE TRUE 1589.350523 1762.286157 1624.783229 1469.701728 1806.26782 1558.407563 1556.637434 1820.641926 1489.233377 1744.610643 0.911005862 1.010131495 0.931315669 0.842423915 1.035341512 0.89326955 0.892254922 1.043580659 0.853619335 1 10.76868938 -10.74728012 4.102896542 1.000033416 0.937857249 0.073863176 0.068512159 21675593466 4097419211 8662909.011 0.015653231 1.79E-11 10.74728012 -0.062176167 GFFDPNTHENLTYR ddPTM_A459_MK2206_30min_R1 2 GFFDPNTHENLTYR 14 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 156.08 0.00045453 20023300 8817.4 9315.8 9302.8 7888.4 9478.1 8838.2 9413.2 8899.6 8052.9 7593.1 FALSE TRUE 8067.433828 8709.339727 8671.351855 8495.965935 9100.567207 9338.611246 8785.262603 8821.791735 8890.027773 8533.790553 0.945351749 1.020571067 1.016119601 0.995567665 1.066415581 1.094309872 1.029467802 1.03374833 1.041744312 1 13.05897099 -3.171756564 0.753673046 1.042525424 6.24E-18 0.483814642 0.027663118 23.00791934 1.398596008 0.010873219 34.20379252 0.000673354 3.171756564 -1.042525424 GFFDPNTHENLTYR ddPTM_A459_MK2206_30min_R2 1 GFFDPNTHENLTYR 14 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 129.54 0.0014679 4577300 39013 53538 36358 46117 44514 51460 48982 40471 40401 45377 FALSE TRUE 41999.86528 50879.38077 37570.15757 42349.09358 42766.1567 53418.34636 42550.60456 45760.69866 43915.00595 43896.35221 0.956796252 1.159079928 0.855883364 0.964752 0.974253088 1.216919942 0.969342609 1.042471558 1.00042495 1 15.42181344 GFGDGYNGYGGGPGGGNFGGS(ph)PGYGGGR ddPTM_A459_MK2206_30min_R1 4 GFGDGYNGYGGGPGGGNFGGSPGYGGGR 28 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GFGDGYNGYGGGPGGGNFGGS(1)PGYGGGR;GFGDGYNGYGGGPGGGNFGGS(1)PGYGGGR;GFGDGYNGYGGGPGGGNFGGS(1)PGYGGGR;GFGDGYNGYGGGPGGGNFGGS(0.986)PGY(0.014)GGGR 138.33 1.09E-12 216123000 10735.6 10367.1 9609.2 8149.6 10388.1 8913.7 10947.6 9283 9114.7 8710.88 TRUE FALSE 9822.480845 9692.199906 8956.954277 8777.283604 9974.31998 9418.385991 10217.30558 9201.83971 10062.20568 9790.049578 1.003312676 0.990005191 0.914903873 0.896551497 1.018822213 0.962036598 1.043641863 0.93991758 1.027799257 1 13.25710045 -6.292813686 24.999169 0.996112428 0.951373452 0.244229395 0.040790376 1073.265435 855179.2344 0.012915956 0.014646197 5.10E-07 6.292813686 -0.044738976 GFGDGYNGYGGGPGGGNFGGS(ph)PGYGGGR ddPTM_A459_MK2206_30min_R2 4 GFGDGYNGYGGGPGGGNFGGSPGYGGGR 28 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GFGDGYNGYGGGPGGGNFGGS(1)PGYGGGR;GFGDGYNGYGGGPGGGNFGGS(0.998)PGY(0.002)GGGR;GFGDGYNGYGGGPGGGNFGGS(0.999)PGY(0.001)GGGR;GFGDGYNGYGGGPGGGNFGGS(0.999)PGY(0.001)GGGR 134.17 1.69E-12 126969000 298773 320372 302767 352026 323578 341527 352633 273275 274648 336145 TRUE FALSE 321647.2906 304462.7923 312861.1007 323264.3497 310872.7019 354524.0493 306331.8635 308992.9808 298536.3866 325176.6162 0.989146435 0.936299774 0.962126688 0.994119299 0.956011861 1.090250749 0.942047639 0.950231245 0.918074584 1 18.31086399 -10.2731802 0.003509107 1.096865557 0.853559278 0.001198722 0.046257848 1595169.855 1175.330877 41516.92265 39981.78569 5.33E-11 10.2731802 -0.243306279 GFGFGQGAGALVHS(ph)E ddPTM_A459_MK2206_30min_R1 6 GFGFGQGAGALVHSE 15 0 E9PP21;P21291 E9PP21 CSRP1 Cysteine and glycine-rich protein 1 1 GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E 198.48 1.91E-05 567912000 24623 23994.5 24737.9 22177 26086.2 23416.9 25968.9 24370.1 22957.9 20894.7 TRUE FALSE 22528.68455 22432.45369 23058.76027 23885.07638 25047.13142 24742.74464 24236.56206 24157.03479 25344.45586 23483.29318 0.959349456 0.955251613 0.981921918 1.017109321 1.066593651 1.053631807 1.032076799 1.028690252 1.079254756 1 14.51934712 -5.767441934 2.245209162 1.044708742 0.958498464 0.739484729 0.020855277 0.14157595 1.456137197 0.006067399 0.011408144 1.71E-06 5.767441934 -0.086210278 GFGFGQGAGALVHS(ph)E ddPTM_A459_MK2206_30min_R2 6 GFGFGQGAGALVHSE 15 0 E9PP21;P21291 E9PP21 CSRP1 Cysteine and glycine-rich protein 1 1 GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E 161.87 0.00011668 377030800 301805 355443 322335 416049 382129 394870 439586 320842 343890 367206 TRUE FALSE 324911.4228 337792.2175 333081.488 382056.4658 367124.6954 409897.0545 381867.8302 362777.151 373800.9306 355224.0983 0.91466605 0.950927088 0.937665799 1.075536451 1.03350166 1.153911169 1.075005418 1.021262782 1.052296092 1 18.43836993 -5.757624072 24.92982622 1.063259246 0.936070351 0.669533537 0.039948752 55.14046708 360289.9223 0.011231368 0.018551164 1.75E-06 5.757624072 -0.127188894 GFGFVDFNS(ph)EEDAK ddPTM_A459_MK2206_30min_R1 3 GFGFVDFNSEEDAK 14 0 P19338;H7BY16 P19338 NCL Nucleolin 1 GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK 162.79 0.000273 13187500 7861.7 8476.6 9057.7 7329.9 6953.4 6108.3 7698.8 6950.7 7374.4 7376.7 TRUE FALSE 7193.021132 7924.771799 8442.88856 7894.450168 6676.431354 6454.146667 7185.227099 6889.930763 8140.99527 8290.581287 0.867613607 0.955876497 1.018371121 0.952219138 0.805303165 0.778491452 0.8666735 0.831055209 0.981957113 1 13.01725754 -4.389335835 10.5643557 0.901340693 0.000257122 0.01409041 0.081208743 239084.3579 386530.7701 0.021980775 4941535.645 4.08E-05 4.389335835 -0.901083572 GFGFVDFNS(ph)EEDAK ddPTM_A459_MK2206_30min_R2 4 GFGFVDFNSEEDAK 14 0 P19338;H7BY16 P19338 NCL Nucleolin 1 GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK 154.65 8.35E-05 0 26718 27294.3 23338.2 26817.4 24221.5 19723.8 34731.8 22664.7 21859 28764.3 TRUE FALSE 28763.55062 25938.90475 24116.28394 24626.33264 23270.44221 20474.40303 30171.47294 25627.05411 23760.25631 27825.72325 1.033703612 0.932191574 0.866690282 0.885020397 0.836292448 0.735808477 1.084301481 0.920984295 0.853895372 1 14.76413157 -9.841782415 12.3783379 1.000000005 0.903175081 0.083729868 0.09358295 0 0 0.092742516 0.022493364 1.44E-10 9.841782415 -0.096824924 GFGFVDFNSEEDAK ddPTM_A459_MK2206_30min_R2 4 GFGFVDFNSEEDAK 14 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ;;; 203.39 0.00048189 9862600 52975.8 67917.5 63442.5 79708.6 70209.1 63089.9 71437.2 58316 61500.6 69187.1 FALSE TRUE 57031.66798 64544.81571 65557.64129 73196.1524 67452.33796 65490.83035 62057.40983 65938.10143 66849.81102 66929.53059 0.852115165 0.964369765 0.979502481 1.093630147 1.007811311 0.978504253 0.927205215 0.98518697 0.998808903 1 16.03035528 -4.727721403 2.313703578 0.996181151 0.803851225 0.553653088 0.038863214 0.609695503 3.457500277 0.011289946 0.253766306 1.87E-05 4.727721403 -0.192329925 GFGFVSFER ddPTM_A459_MK2206_30min_R2 1 GFGFVSFER 9 0 P11940;E7ERJ7;P11940-2;A0A087WTT1;E7EQV3;Q9H361;H0YAR2;H0YAP2 P11940 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 0 134.81 0.038688 4211300 13270 14646 13415 14392 13190 14824 12981 8357.8 13902 14831 FALSE TRUE 14285.9614 13918.70094 13862.2494 13216.12756 12672.09433 15388.13771 11276.57911 9450.193157 15111.17083 14347.06568 0.995740991 0.970142693 0.966207984 0.921172862 0.883253385 1.072563411 0.785985048 0.658684735 1.053258636 1 13.80846808 -7.277690519 24.7974036 0.84603917 0.962182775 0.12212065 0.11254035 1244.359351 1898744.15 0.045682268 0.030904439 5.28E-08 7.277690519 0.116143605 GFGFVTFDDHDPVDK ddPTM_A459_MK2206_30min_R1 2 GFGFVTFDDHDPVDK 15 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 167.37 0.00010292 135145000 8225.8 9407.5 8586.4 7321.2 7252.9 7325.8 8418.7 7306.5 7649.9 7818.6 FALSE TRUE 7526.152515 8795.07004 8003.579091 7885.080093 6964.001635 7740.580465 7857.103884 7242.620041 8445.13448 8787.227195 0.856487757 1.000892528 0.910819638 0.897334269 0.792514121 0.880889989 0.894150533 0.824221325 0.961069322 1 13.10119228 -10.85799812 7.724511693 1.000000805 0.889881201 0.245403196 0.057350666 8.10E-07 6.97E-08 0.056541104 0.013713132 1.39E-11 10.85799812 -0.110119604 GFGFVTFDDHDPVDK ddPTM_A459_MK2206_30min_R2 4 GFGFVTFDDHDPVDK 15 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;; 188.09 3.45E-05 66331400 247095 269873 268362 267808 249300 216695.5 266988 234478.6 208858.1 261181 FALSE TRUE 266012.7832 256471.4993 277309.0551 245927.2297 239511.2294 224941.9991 231932.1549 265125.7581 227024.2 252658.6854 1.052854299 1.015090769 1.097563912 0.973357513 0.94796357 0.890299887 0.917966285 1.049343535 0.898541048 1 17.94683025 -5.912594168 5.922979449 0.949518885 1.050588784 0.48569656 0.048099558 0.180534877 9.744290726 0.013662488 0.020469236 1.22E-06 5.912594168 0.101069899 GFGQSNS(ph)LPTAGSVGGGMGR ddPTM_A459_MK2206_30min_R2 1 GFGQSNSLPTAGSVGGGMGR 20 0 G3V2R1;Q9UPU9-2;Q9UPU9-3;Q9UPU9 G3V2R1 SAMD4A Protein Smaug homolog 1 1 GFGQS(0.015)NS(0.77)LPT(0.192)AGS(0.022)VGGGMGR 208.62 1.01E-16 4878500 16284 14331 13153 16008 15845 13730 15084 10271 11288 13232 TRUE FALSE 17530.71556 13619.34338 13591.51446 14700.09519 15222.84569 14252.50477 13103.45268 11613.45497 12269.80984 12800.24092 1.369561375 1.063991175 1.061817081 1.148423321 1.189262435 1.113455978 1.023687973 0.907284092 0.958560851 1 13.64388334 -7.340879728 2.445543558 0.950592743 1.15353911 0.552194702 0.083632133 0.237025692 2.771394622 0.041393772 0.025778005 4.56E-08 7.340879728 0.202946367 GFGQSNSLPT(ph)AGSVGGGMGR ddPTM_A459_MK2206_30min_R1 1 GFGQSNSLPTAGSVGGGMGR 20 0 G3V2R1;Q9UPU9-2;Q9UPU9-3;Q9UPU9 G3V2R1 SAMD4A Protein Smaug homolog 1 1 GFGQS(0.112)NS(0.177)LPT(0.708)AGS(0.004)VGGGMGR 142.84 0.00010923 3488800 820.86 845.75 733.16 692.31 735.62 628.76 680.44 466.23 534.82 623.68 TRUE FALSE 751.0415465 790.6915213 683.3951419 745.6318362 706.3186977 664.3598478 635.0490891 462.1538003 590.4164529 700.9461869 1.071468196 1.128034557 0.974960924 1.06375047 1.007664655 0.947804354 0.905988364 0.659328503 0.842313524 1 9.45315988 -7.05305717 1.591992946 0.815725636 1.056002451 0.529283779 0.087550789 0.271315344 1.378849488 0.043263961 0.03103358 8.85E-08 7.05305717 0.240276815 GFGQSNSLPT(ph)AGSVGGGMGR ddPTM_A459_MK2206_30min_R2 1 GFGQSNSLPTAGSVGGGMGR 20 0 G3V2R1;Q9UPU9-2;Q9UPU9-3;Q9UPU9 G3V2R1 SAMD4A Protein Smaug homolog 1 1 GFGQSNS(0.274)LPT(0.719)AGS(0.007)VGGGMGR 134.08 0.00029304 4293300 13839 12362 13127 15820 15372 15995 13594 9103.5 14684 13737 TRUE FALSE 14898.52448 11748.12106 13564.64763 14527.45539 14768.41804 16603.70093 11809.09147 10293.35871 15961.18778 13288.76282 1.121137061 0.88406432 1.02076076 1.093213537 1.111346349 1.249454232 0.888652438 0.774591198 1.201104121 1 13.69791918 -12.08300362 2.136835564 0.511752405 1.031031017 0.004160107 0.142410537 4365082.632 2017446.043 9663526.9 0.036919878 8.26E-13 12.08300362 0.519278612 GFGS(ph)EEGSR ddPTM_A459_MK2206_30min_R1 4 GFGSEEGSR 9 0 Q9Y5S9 Q9Y5S9 RBM8A RNA-binding protein 8A 1 GFGS(0.885)EEGS(0.115)R;GFGS(0.999)EEGS(0.001)R;GFGS(0.991)EEGS(0.009)R;GFGS(0.619)EEGS(0.381)R 110.53 0.010796 103496200 12293.2 11898.8 11800.8 10110.4 12082.4 10666.1 12354.1 10721.8 9657.5 9915.9 TRUE FALSE 11247.59879 11124.18596 10999.79457 10889.10476 11601.13242 11270.00536 11529.98053 10628.06043 10661.43168 11144.35655 1.009264082 0.998190062 0.987028235 0.97709587 1.040987191 1.011274658 1.034602624 0.953671967 0.95666642 1 13.4440257 -7.774397179 24.99996521 0.966376888 1.007304009 0.391636414 0.021661734 239.0965535 461290.8328 0.012138664 0.005891933 1.68E-08 7.774397179 0.040927121 GFGS(ph)EEGSR ddPTM_A459_MK2206_30min_R2 3 GFGSEEGSR 9 0 Q9Y5S9 Q9Y5S9 RBM8A RNA-binding protein 8A 1 GFGS(0.936)EEGS(0.064)R;GFGS(0.986)EEGS(0.014)R;GFGS(0.99)EEGS(0.01)R 112.85 0.0094578 122676000 268178 344154 304677 410633 335096 372210 340936 282300 279215 317959 TRUE FALSE 288709.9139 327063.8128 314834.7791 377082.9704 321938.4473 386374.7124 296170.6937 319197.5793 303500.616 307584.0239 0.938637548 1.063331602 1.02357325 1.225951093 1.0466683 1.256159886 0.962893618 1.037757343 0.986724252 1 18.23062105 GFGS(ph)LPCILNACSGDAK ddPTM_A459_MK2206_30min_R2 3 GFGSLPCILNACSGDAK 17 0 Q8WWL2-4;Q8WWL2-3;Q8WWL2-2;Q8WWL2 Q8WWL2-4 SPIRE2 Protein spire homolog 2 1 GFGS(0.994)LPCILNACS(0.006)GDAK;GFGS(1)LPCILNACSGDAK;GFGS(0.981)LPCILNACS(0.019)GDAK 180.78 7.67E-10 2821400 33744.7 33707.1 36967.5 42808 37238.3 44304.4 53379 38760.7 39648.5 43290 TRUE FALSE 36328.22018 32033.25443 38199.978 39310.44946 35776.13723 45990.43499 46370.27318 43826.85658 43097.05486 41877.45085 0.867488814 0.764928471 0.912184893 0.938702062 0.854305516 1.098214769 1.107285001 1.046550248 1.029123168 1 15.35388601 -6.75749705 24.99998779 1.062334687 0.868258012 0.771520939 0.051293167 49.66740472 314962.2594 0.018392184 0.017746033 1.75E-07 6.75749705 -0.194076674 GFGS(ph)VEELCTNSSLGMEK ddPTM_A459_MK2206_30min_R1 3 GFGSVEELCTNSSLGMEK 18 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 GFGS(0.992)VEELCT(0.006)NS(0.001)SLGMEK;GFGS(1)VEELCTNSSLGMEK;GFGS(1)VEELCTNSSLGMEK 298.33 1.66E-95 42168700 3605.04 3358 3952.22 3149.45 3596.8 2981.97 3482.59 3447.03 3035.27 2957.09 TRUE FALSE 3298.412417 3139.39359 3683.954318 3392.021185 3453.53184 3150.806564 3250.272775 3416.89298 3350.797178 3323.436634 0.992470379 0.944622671 1.108477376 1.020636636 1.039144783 0.948056759 0.977985481 1.028120394 1.008232606 1 11.69846013 GFGS(ph)VEELCTNSSLGMEK ddPTM_A459_MK2206_30min_R2 3 GFGSVEELCTNSSLGMEK 18 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 GFGS(0.998)VEELCT(0.002)NSSLGMEK;GFGS(1)VEELCTNSSLGMEK;GFGS(1)VEELCTNSSLGMEK 165.66 2.28E-06 0 12337.7 15055.6 12596.8 17024.8 14008 15141.8 16958.4 14431.3 13785.8 15993.7 TRUE FALSE 13282.2838 14307.9608 13016.77102 15633.81938 13457.97554 15718.03181 14731.74171 16317.52046 14984.86396 15471.82688 0.85848193 0.924775135 0.841320881 1.01047016 0.869837521 1.015913113 0.952165625 1.054660228 0.96852583 1 13.91735594 -6.299452994 0.622188001 1.009161778 0.868651558 0.441713785 0.052329869 0.826492038 0.678308044 0.034169235 0.063337459 5.02E-07 6.299452994 -0.14051022 GFGSSAPEGLEPDS(ph)MASAASALHLLSPRPR ddPTM_A459_MK2206_30min_R1 1 GFGSSAPEGLEPDSMASAASALHLLSPRPR 30 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 GFGSSAPEGLEPDS(0.492)MAS(0.131)AAS(0.131)ALHLLS(0.246)PRPR 70.295 0.00013996 41373000 2542.5 2042.1 2434.3 1522.9 2464.5 2783.1 2865.6 1917.8 1461.4 1548 TRUE FALSE 2326.247024 1909.158919 2269.066498 1640.194022 2366.333746 2940.676717 2674.441053 1901.032877 1613.31776 1739.777927 1.337094228 1.097357823 1.304227662 0.942760565 1.360135515 1.690259815 1.537231282 1.092687088 0.927312466 1 10.76468745 -7.969336731 9.438308239 0.97881156 1.31567497 0.367460171 0.195398495 0.368236146 107.8640238 0.120852151 0.057532287 1.07E-08 7.969336731 0.336863411 GFGSSAPEGLEPDS(ph)MASAASALHLLSPRPR ddPTM_A459_MK2206_30min_R2 1 GFGSSAPEGLEPDSMASAASALHLLSPRPR 30 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 GFGSSAPEGLEPDS(0.703)MAS(0.208)AAS(0.023)ALHLLS(0.066)PRPR 63.479 0.00052016 7704200 12225 18337 11585 19755 16432 20681 14486 10842 17149 13291 TRUE FALSE 13160.9554 17426.41124 11971.23812 18140.95331 15786.79712 21468.02995 12583.9708 12259.08663 18640.58902 12857.31576 1.023616099 1.355369314 0.931083777 1.410944061 1.227845486 1.669713208 0.978740122 0.953471693 1.449804094 1 13.65030186 -11.27440666 2.79001419 0.95513928 1.221439154 0.073421036 0.23688398 52359656.9 50655718.36 16382752.65 0.057492853 5.32E-12 11.27440666 0.266299874 GFGSSAPEGLEPDSMASAAS(ph)ALHLLSPRPR ddPTM_A459_MK2206_30min_R2 1 GFGSSAPEGLEPDSMASAASALHLLSPRPR 30 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 GFGSSAPEGLEPDS(0.015)MAS(0.22)AAS(0.383)ALHLLS(0.383)PRPR 79.36 1.13E-05 15485000 20660 34443 24747 38865 31253 31791 26870 20760 27833 23333 TRUE FALSE 22241.74548 32732.6107 25572.05263 35689.60518 30025.85019 33000.82878 23341.93672 23473.40328 30253.86403 22571.64612 0.98538429 1.450164978 1.132928121 1.5811698 1.330246364 1.462047943 1.03412647 1.039950881 1.340348146 1 14.46222402 -7.270446872 24.64920801 1.106935609 1.332742445 0.260413619 0.181250818 753.6503819 2062371.107 0.072434532 0.049647851 5.36E-08 7.270446872 0.225806836 GFGSSAPEGLEPDSMASAASALHLLS(ph)PR ddPTM_A459_MK2206_30min_R1 3 GFGSSAPEGLEPDSMASAASALHLLSPR 28 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 GFGSSAPEGLEPDSMASAAS(0.005)ALHLLS(0.995)PR;GFGSSAPEGLEPDSMAS(0.014)AAS(0.212)ALHLLS(0.773)PR;GFGSSAPEGLEPDSMASAAS(0.001)ALHLLS(0.999)PR 164.83 1.19E-18 199194400 11237.9 8878.2 8462.5 4930.7 9624.1 10811.1 10683.6 7952.6 6323.1 9399.4 TRUE FALSE 10282.05759 8300.227566 7888.089078 5310.463368 9240.751718 11423.21514 9970.916537 7883.071257 6980.408872 10563.86863 0.973323121 0.785718552 0.746704579 0.502700625 0.874750722 1.081347708 0.943869796 0.74622958 0.660781492 1 13.36685065 -6.480086259 24.99932206 0.885715998 0.745950936 0.15048521 0.154018607 979.8669439 572437.2059 0.051405015 0.058283331 3.31E-07 6.480086259 -0.139765062 GFGSSAPEGLEPDSMASAASALHLLS(ph)PR ddPTM_A459_MK2206_30min_R2 5 GFGSSAPEGLEPDSMASAASALHLLSPR 28 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 GFGSSAPEGLEPDS(0.002)MAS(0.008)AAS(0.024)ALHLLS(0.966)PR;GFGSSAPEGLEPDS(0.001)MAS(0.031)AAS(0.025)ALHLLS(0.943)PR;GFGSSAPEGLEPDSMAS(0.003)AAS(0.013)ALHLLS(0.984)PR;GFGSSAPEGLEPDSMASAASALHLLS(0.999)PR;GFGSSAPEGLEPDS(0.001)MAS(0.24)AAS(0.131)ALHLLS(0.628)PR 109.02 1.43E-09 25969000 74684.9 94768.6 68603.9 106265 95159.7 90416.3 83174 64276.1 77069.8 72256.2 TRUE FALSE 80402.83337 90062.52913 70891.11979 97582.80958 91423.25204 93857.15565 72253.15389 72677.20696 83773.19189 69898.48611 1.15028004 1.288476105 1.014201075 1.396064708 1.307943235 1.342763783 1.033686964 1.039753663 1.198497944 1 16.09297359 -7.272564369 24.73967141 1.071297438 1.250266908 0.390451635 0.111353711 721.0195447 1603391.389 0.046925518 0.031981077 5.34E-08 7.272564369 0.17896947 GFGSSAPEGLEPDSMASAASALHLLS(ph)PRPR ddPTM_A459_MK2206_30min_R1 1 GFGSSAPEGLEPDSMASAASALHLLSPRPR 30 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 GFGSSAPEGLEPDS(0.126)MAS(0.346)AAS(0.16)ALHLLS(0.369)PRPR 65.125 0.00022629 31862000 4560.5 3166.4 3808.5 2845.4 4045.7 4339.2 4212.3 2999.3 2308 2578.2 TRUE FALSE 4172.605527 2960.266784 3549.989631 3064.553201 3884.551202 4584.881754 3931.305153 2973.077436 2547.924859 2897.60688 1.440017814 1.021624708 1.225145362 1.057615242 1.340606701 1.582299443 1.356742069 1.026045823 0.879320406 1 11.50064616 -11.16594994 6.704591563 0.999119776 1.217598002 0.087173221 0.207882388 0.002919243 0.00015541 0.214826934 0.051902852 6.82E-12 11.16594994 0.218478225 GFGSSAPEGLEPDSMASAASALHLLS(ph)PRPR ddPTM_A459_MK2206_30min_R2 1 GFGSSAPEGLEPDSMASAASALHLLSPRPR 30 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 GFGSSAPEGLEPDS(0.015)MAS(0.017)AAS(0.057)ALHLLS(0.911)PRPR 68.041 0.00020567 14596000 7838.6 10093 7126.6 10380 8858.6 10461 8136.7 6348.5 8229.3 6319.5 TRUE FALSE 8438.729243 9591.796297 7364.197287 9531.920796 8510.766853 10859.10069 7068.341516 7178.270748 8945.069639 6113.295233 1.380389613 1.569005901 1.204619932 1.559211593 1.392173374 1.776308893 1.156224466 1.174206459 1.463215712 1 12.57773453 -8.938045958 0.493695229 0.985817752 1.458960613 0.32069459 0.18392865 2.109870211 0.99807091 0.286386111 0.099791372 1.15E-09 8.938045958 0.473142861 GFIDQNLS(ph)PTK ddPTM_A459_MK2206_30min_R2 1 GFIDQNLSPTK 11 0 F8WAY9;C9JTZ9;Q14188 F8WAY9 TFDP2 Transcription factor Dp-2 1 GFIDQNLS(0.998)PT(0.002)K 108.68 0.0098291 3617300 23417 20134 18254 19260 19992 20091 22366 20004 17070 26155 TRUE FALSE 25209.82352 19134.17484 18862.57925 17686.39639 19207.01363 20855.57708 19429.31733 22618.59148 18554.71774 25301.56449 0.996374099 0.756244731 0.745510391 0.699023825 0.759123557 0.824280138 0.767909721 0.893960193 0.733342705 1 14.62693897 -11.27776925 6.882099605 1.004250116 0.793334137 0.343869983 0.083833997 0.005485782 0.000195379 0.081451783 0.019444564 5.28E-12 11.27776925 -0.210915979 GFIDQNLSPT(ph)K ddPTM_A459_MK2206_30min_R1 1 GFIDQNLSPTK 11 0 F8WAY9;C9JTZ9;Q14188 F8WAY9 TFDP2 Transcription factor Dp-2 1 GFIDQNLS(0.458)PT(0.542)K 126.83 0.0072106 11690000 2887.7 3714.4 3241.7 2598 2537.1 2348.4 3029.9 2474 3209.2 3413.7 TRUE FALSE 2642.085951 3472.591885 3021.662436 2798.09841 2436.041935 2481.364379 2827.780899 2452.370079 3542.807824 3836.614928 0.688650282 0.905118692 0.787585539 0.729314373 0.634945644 0.646758777 0.737051008 0.639201516 0.923420226 1 11.90561826 -8.422607596 4.682744489 0.997454667 0.725517795 0.612631233 0.077460077 0.149024728 4.920075736 0.081302487 0.021219772 3.78E-09 8.422607596 -0.271936871 GFIDQNLSPT(ph)K ddPTM_A459_MK2206_30min_R2 2 GFIDQNLSPTK 11 0 F8WAY9;C9JTZ9;Q14188 F8WAY9 TFDP2 Transcription factor Dp-2 1 GFIDQNLS(0.412)PT(0.588)K;GFIDQNLS(0.053)PT(0.947)K 128.57 0.0064357 21458000 105761 81287 81536 91776 73967 73546 99481 76353 64656 85162 TRUE FALSE 113858.1435 77250.40578 84254.36954 84277.60722 71062.68393 76344.84457 86419.0252 86332.59926 70279.66201 82383.17091 1.382055852 0.937696436 1.02271336 1.022995428 0.862587384 0.926704371 1.048988819 1.047939747 0.85308275 1 16.33006204 -4.758536524 24.99247407 0.97187667 1.382056408 0.765463853 0.068545815 38.71918778 333296.5542 0.017326158 0.117754024 1.74E-05 4.758536524 0.410179738 GFLS(ph)PGSR ddPTM_A459_MK2206_30min_R1 2 GFLSPGSR 8 0 Q5UIP0;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 GFLS(0.998)PGS(0.002)R;GFLS(0.994)PGS(0.006)R 104.01 0.014949 16913100 12355.8 10737.4 9348.5 8958.2 9760 9228.1 10326.4 7963.3 8785.6 8831.3 TRUE FALSE 11304.87433 10038.39331 8713.949866 9648.162116 9371.238533 9750.587047 9637.544698 7893.677708 9698.89456 9925.388117 1.138985619 1.011385468 0.877945503 0.972069001 0.944168472 0.98238849 0.970999278 0.795301666 0.977180383 1 13.2769078 -4.876026404 3.130255993 0.936630288 1.150148822 0.519663491 0.058379016 0.228385777 3.729361329 0.014819862 0.107307978 1.33E-05 4.876026404 0.213518535 GFQVAPEHHNDHK ddPTM_A459_MK2206_30min_R2 1 GFQVAPEHHNDHK 13 0 P21399 P21399 ACO1 Cytoplasmic aconitate hydratase 0 84.605 0.010162 1242000 12698 11981 12266 13842 14080 14066 15061 13115 10344 12404 FALSE TRUE 13670.16864 11386.04096 12674.94232 12711.06432 13527.14845 14601.29149 13083.47261 14829.17553 11243.70242 11999.2585 1.139251117 0.948895381 1.056310465 1.059320818 1.127332031 1.216849482 1.090356759 1.235840993 0.937033103 1 13.55065764 -4.433083642 22.51986242 1.084999237 6.848778056 0.029748643 0.095437951 3044.154001 749525.0652 0.023024587 16438.81944 3.69E-05 4.433083642 5.763778819 GFS(ph)DSGGGPPAK ddPTM_A459_MK2206_30min_R2 3 GFSDSGGGPPAK 12 0 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 GFS(0.98)DS(0.02)GGGPPAK;GFS(0.763)DS(0.237)GGGPPAK;GFS(0.857)DS(0.143)GGGPPAK 113.65 0.0061175 0 48131.1 45754.1 48326.1 70668.2 51930.9 44181.1 55553.2 41770.2 42236.5 58690.1 TRUE FALSE 51816.05402 43482.01793 49937.26805 64894.382 49891.83193 45862.44272 48258.99811 47229.70856 45910.15442 56775.04684 0.912655416 0.765864941 0.879563661 1.143008868 0.878763378 0.807792248 0.850003669 0.831874409 0.808632612 1 15.79296937 -6.516522136 24.97290586 0.847963462 0.92315496 0.080987821 0.100809277 722.668489 2839127.296 0.034245228 0.035437779 3.04E-07 6.516522136 0.075191498 GFS(ph)FVATGLMEDDGKPR ddPTM_A459_MK2206_30min_R1 1 GFSFVATGLMEDDGKPR 17 1 E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q5SVM6 E9PGT3 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 1 GFS(1)FVATGLMEDDGKPR 134.4 0.0003057 6207800 1743.2 2160.7 2249.8 2049.7 1896.8 1607.8 1729.7 2193.2 1596.4 1210.6 TRUE FALSE 1594.931686 2020.038037 2097.089844 2207.568249 1821.246439 1698.832247 1614.314869 2174.025084 1762.351493 1360.578268 1.172245452 1.484690801 1.541322461 1.622522057 1.338582633 1.248610453 1.186491735 1.597868447 1.29529593 1 10.41000423 -6.501472445 22.93439282 1.297575129 1.465591317 0.193473032 0.176138678 496.5315038 531976.7204 0.05542761 0.062119007 3.15E-07 6.501472445 0.168016188 GFS(ph)LEELR ddPTM_A459_MK2206_30min_R1 2 GFSLEELR 8 0 P26373-2;P26373;J3QSB4 P26373-2 RPL13 60S ribosomal protein L13 1 GFS(1)LEELR;GFS(1)LEELR 125.71 0.0050199 5593100 4599.6 5511.6 5229 4939.2 5361.7 5215.7 6691.4 5180.6 5515.8 3921.6 TRUE FALSE 4208.379867 5152.793838 4874.070049 5319.61804 5148.132135 5511.008427 6245.028915 5135.30656 6089.187148 4407.437415 0.95483599 1.169113331 1.10587391 1.206963943 1.168055641 1.250388357 1.416929687 1.165145657 1.381570871 1 12.10572437 -3.530988185 0.572802929 1.251336507 5.45E-14 0.315753772 0.114466061 15.83600468 1.30651247 0.053105999 18.09969285 0.00029445 3.530988185 -1.251336507 GFS(ph)LEELR ddPTM_A459_MK2206_30min_R2 1 GFSLEELR 8 0 P26373-2;P26373;J3QSB4 P26373-2 RPL13 60S ribosomal protein L13 1 GFS(1)LEELR 99.013 0.017795 0 7092.2 9132.7 9365.4 10005 9426.5 9584.5 9935.1 9553.5 16176 10246 TRUE FALSE 7635.184285 8679.183398 9677.637762 9187.559496 9056.368246 9949.244864 8630.609436 10802.17525 17582.95924 9911.673859 0.770322389 0.875652642 0.976387833 0.926943282 0.913707248 1.003790581 0.87075196 1.089843694 1.773964669 1 13.274913 -8.023078048 10.98947412 1.402264404 0.916697804 0.520238629 0.183429272 0.510606235 238.9657281 0.107507371 0.042927634 9.48E-09 8.023078048 -0.4855666 GFS(ph)TWLK ddPTM_A459_MK2206_30min_R2 2 GFSTWLK 7 0 P26038;V9GZ54 P26038 MSN Moesin 1 GFS(0.962)T(0.038)WLK;GFS(0.983)T(0.017)WLK 88.948 0.031607 2886800 16485.5 24082 22971 23951 17865.3 21068 21324 17209.3 23114.7 18865 TRUE FALSE 17747.64256 22886.1229 23736.84168 21994.12668 17163.81856 21869.7575 18524.13319 19458.6146 25125.17482 18249.43659 0.972503587 1.254072847 1.300689013 1.205194833 0.940512244 1.198379873 1.015052333 1.066258374 1.376764411 1 14.1555643 GFS(ph)VVADTPELQR ddPTM_A459_MK2206_30min_R1 2 GFSVVADTPELQR 13 0 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 1 GFS(0.568)VVADT(0.432)PELQR;GFS(0.648)VVADT(0.352)PELQR 133.98 0.0012684 11449100 2911.5 2850 3327.4 2364.3 2798.6 2830.9 3525.6 2714.7 2321.87 2231.27 TRUE FALSE 2663.861636 2664.464482 3101.545359 2546.398796 2687.125836 2991.183112 3290.413657 2690.965664 2563.236695 2507.696573 1.062274306 1.062514704 1.236810463 1.015433375 1.071551425 1.192801053 1.312125914 1.073082642 1.022147864 1 11.29214708 -7.995783006 24.99976281 1.023254324 1.136601899 0.252710207 0.086300433 174.7575047 1036022.802 0.050559867 0.024125111 1.01E-08 7.995783006 0.113347574 GFS(ph)VVADTPELQR ddPTM_A459_MK2206_30min_R2 3 GFSVVADTPELQR 13 0 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 1 GFS(0.936)VVADT(0.064)PELQR;GFS(0.723)VVADT(0.277)PELQR;GFS(0.826)VVADT(0.174)PELQR 185.66 0.00026296 135871900 371307 325046 343554 408811 354418 361393 386960 289104 299557 353574 TRUE FALSE 399734.5494 308904.6883 355007.9189 375409.8336 340501.7685 375146.0639 336151.6872 326890.8854 325611.9264 342036.9093 1.168688345 0.903132615 1.037922836 1.09757112 0.995511769 1.096799946 0.982793605 0.955718159 0.951978917 1 18.38379249 -7.454914512 8.113079318 0.966102379 1.042360594 0.238578177 0.067102599 0.489574498 53.98387068 0.027206808 0.01822776 3.51E-08 7.454914512 0.076258215 GFSQYGVSGS(ph)PTK ddPTM_A459_MK2206_30min_R1 2 GFSQYGVSGSPTK 13 0 Q9NXC5 Q9NXC5 MIOS WD repeat-containing protein mio 1 GFS(0.003)QYGVS(0.029)GS(0.745)PT(0.223)K;GFSQYGVS(0.016)GS(0.582)PT(0.401)K 174.47 0.00012262 122608000 15761.7 15532.4 16449.6 14436.1 13603.4 12510.5 15101.6 13915.8 14630.9 13534.3 TRUE FALSE 14421.08465 14521.23794 15333.04698 15547.97092 13061.54777 13218.8337 14094.19982 13794.13563 16151.83441 15211.03126 0.948067517 0.954651771 1.008021528 1.022151007 0.858689168 0.869029421 0.926577533 0.906850784 1.061850057 1 13.89283035 -8.261290351 24.99999793 1.030925033 0.937374553 0.349402269 0.051394869 16.53120594 2774515.876 0.044692652 0.01447356 5.48E-09 8.261290351 -0.09355048 GFSQYGVSGS(ph)PTK ddPTM_A459_MK2206_30min_R2 3 GFSQYGVSGSPTK 13 0 Q9NXC5 Q9NXC5 MIOS WD repeat-containing protein mio 1 GFSQYGVSGS(0.591)PT(0.409)K;GFSQYGVS(0.002)GS(0.969)PT(0.028)K;GFSQYGVS(0.024)GS(0.975)PT(0.001)K 233.28 2.10E-13 125929000 244538 259476 249767 256917 264987 207768 288775 221712 217289 274089 TRUE FALSE 263260.0173 246590.7992 258094.1071 235926.0593 254582.2789 215674.7568 250858.4956 250690.5197 236188.4045 265145.4984 0.992888881 0.930020689 0.973405578 0.889798472 0.960160668 0.813420398 0.946116367 0.945482843 0.89078791 1 18.01642473 -3.904614119 0.833524943 0.918765575 1.215445958 0.128163115 0.050035345 17.05902389 3.122758313 0.016979896 6.582436672 0.000124562 3.904614119 0.296680383 GFSVVADT(ph)PELQR ddPTM_A459_MK2206_30min_R1 4 GFSVVADTPELQR 13 0 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 1 GFSVVADT(1)PELQR;GFS(0.068)VVADT(0.932)PELQR;GFS(0.002)VVADT(0.998)PELQR;GFS(0.024)VVADT(0.976)PELQR 206.45 2.88E-05 674600000 27723.2 23922 23061.2 19161.3 27210.6 22768.8 27022.2 24744.1 21616.2 22602.5 TRUE FALSE 25365.19626 22364.67345 21495.87 20637.10665 26126.74418 24057.94978 25219.59834 24527.76494 23863.28134 25402.66834 0.998524876 0.880406466 0.846205198 0.812399169 1.028503929 0.947063885 0.992793277 0.965558603 0.939400579 1 14.63269243 -6.267632478 24.99991201 0.976268828 0.88137277 0.454704679 0.050607617 478.8830709 1933121.436 0.015976898 0.018567184 5.40E-07 6.267632478 -0.094896058 GFSVVADT(ph)PELQR ddPTM_A459_MK2206_30min_R2 4 GFSVVADTPELQR 13 0 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 1 GFS(0.001)VVADT(0.999)PELQR;GFS(0.004)VVADT(0.996)PELQR;GFS(0.175)VVADT(0.825)PELQR;GFS(0.442)VVADT(0.558)PELQR 189.1 0.00035904 130239600 330998 327580 312245 380678 351161 405377 343052 276475.4 288543.1 348293 TRUE FALSE 356339.4614 311312.8535 322655.0925 349575.3897 337372.6547 420803.9058 298008.8603 312611.6841 313640.0573 336928.2279 1.057612369 0.923973795 0.95763746 1.037536664 1.001319055 1.24894227 0.884487661 0.927828713 0.930880915 1 18.36208178 GFSVVADTPELQR ddPTM_A459_MK2206_30min_R1 1 GFSVVADTPELQR 13 0 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 0 175.49 0.0013659 3649200 1638.2 1859.6 1660.5 1678.8 1708.4 2023.6 1903.2 1660.2 1768.3 1507.6 FALSE TRUE 1498.862487 1738.539702 1547.789886 1808.101467 1640.35081 2138.174483 1776.241001 1645.685046 1952.121113 1694.37287 0.884611949 1.026066773 0.913488355 1.067121352 0.968116782 1.26192677 1.048317659 0.971264989 1.152120143 1 10.72653568 -5.966604186 1.707324033 1.077020534 0.947597071 0.268489059 0.091046387 0.511194841 3.014498579 0.029807244 0.051204593 1.08E-06 5.966604186 -0.129423463 GFTECEMTKS(ph)SPLK ddPTM_A459_MK2206_30min_R1 1 GFTECEMTKSSPLK 14 1 Q9NQW6 Q9NQW6 ANLN Actin-binding protein anillin 1 GFTECEMT(0.002)KS(0.499)S(0.499)PLK 121.56 0.009032 14888000 2479.6 2366.1 1899.5 2094.5 2027.7 1595.3 1560.5 1841.1 1585.8 1004.9 TRUE FALSE 2268.696999 2212.06646 1770.567232 2255.818753 1946.932415 1685.624507 1456.401892 1825.003457 1750.649585 1129.394599 2.008772666 1.958630281 1.567713565 1.997369879 1.723872611 1.492502717 1.289542109 1.615913038 1.55007788 1 10.14133392 -6.700918645 2.791484679 1.412744715 1.866644629 0.589890783 0.195977175 0.210020777 3.334728338 0.070423493 0.0677285 1.99E-07 6.700918645 0.453899914 GFTIPEAFR ddPTM_A459_MK2206_30min_R2 1 GFTIPEAFR 9 0 O00299 O00299 CLIC1 Chloride intracellular channel protein 1 0 139.97 0.032325 5994900 22888 27881 23483 29401 26465 28259 22165 21393 24849 22962 FALSE TRUE 24640.32288 26496.47008 24265.9115 26998.84425 25425.85112 29334.41605 19254.70888 24189.13855 27010.3211 22212.75182 1.109287272 1.192849508 1.092431577 1.215465984 1.144651114 1.320611525 0.866831315 1.088975321 1.215982663 1 14.43910051 -7.250317435 24.99814393 1.050361924 1.175967676 0.306251806 0.100156526 1007.700929 2264952.435 0.038265601 0.029365186 5.62E-08 7.250317435 0.125605752 GFVLHK ddPTM_A459_MK2206_30min_R2 1 GFVLHK 6 0 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 104.64 0.036785 2797200 41382 50016 39717 52398 42287 52044 47578 44016 47411 47428 FALSE TRUE 44550.23774 47532.27817 41041.14496 48116.91579 40626.5999 54024.57089 41330.95145 49769.04233 51534.72308 45880.42824 0.971007452 1.036003368 0.894524017 1.048746004 0.885488681 1.177507991 0.900840577 1.084755401 1.123239801 1 15.48559124 -6.743436051 24.99989687 1.052789273 0.971476815 0.221031379 0.08418144 413.9570751 574831.0101 0.026478755 0.026427546 1.81E-07 6.743436051 -0.081312458 GGAAGGALPTS(ph)PGPALGAK ddPTM_A459_MK2206_30min_R1 1 GGAAGGALPTSPGPALGAK 19 0 Q9UPR0 Q9UPR0 PLCL2 Inactive phospholipase C-like protein 2 1 GGAAGGALPT(0.243)S(0.757)PGPALGAK 100.68 0.0012499 7862700 5554.9 5580.7 5224.4 4443.8 5287 4739.2 5463.1 5446.8 4679.1 4316.7 TRUE FALSE 5082.426585 5217.395416 4869.782284 4786.062246 5076.407595 5007.529408 5098.666567 5399.179202 5165.509189 4851.485385 1.047602163 1.075422268 1.003771401 0.986514823 1.046361514 1.032164175 1.050949588 1.112891985 1.064727352 1 12.24421081 -7.522770375 24.99999984 1.069669958 1.032112197 0.094232083 0.03456522 6.883297492 1589080.478 0.016288806 0.009531843 3.00E-08 7.522770375 -0.037557761 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVS(ph)GTDVQEECR ddPTM_A459_MK2206_30min_R1 1 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVSGTDVQEECR 41 2 P49321-4;P49321;P49321-3;E9PPR5 P49321-4 NASP Nuclear autoantigenic sperm protein 1 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKS(0.367)VS(0.471)GT(0.163)DVQEECR 72.959 1.58E-08 22214000 1233.8 1004.6 659.15 800.32 1833.7 1504.1 1018.9 1413.6 764.76 782.98 TRUE FALSE 1128.858831 939.2003574 614.4087345 861.9607851 1760.659846 1589.260842 950.9310401 1401.241044 844.2595387 879.9814736 1.282821133 1.067295603 0.698206443 0.979521514 2.000791947 1.806016251 1.080626205 1.592352892 0.959406038 1 9.781329341 -6.115320059 18.49920658 1.444469206 0.988768059 0.236517293 0.34706191 4.231414928 663.9664613 0.104396874 0.13477705 7.67E-07 6.115320059 -0.455701147 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVS(ph)GTDVQEECR ddPTM_A459_MK2206_30min_R2 1 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVSGTDVQEECR 41 2 P49321-4;P49321;P49321-3;E9PPR5 P49321-4 NASP Nuclear autoantigenic sperm protein 1 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKS(0.212)VS(0.525)GT(0.262)DVQEECR 42.505 0.0081308 22597000 31206 28634 36228 27356 28687 22641 34519 25425 25401 32511 TRUE FALSE 33595.15535 27212.0772 37435.82344 25120.92729 27560.60424 23502.61912 29986.61384 28748.1348 27610.33307 31450.16873 1.068202706 0.865244235 1.190321863 0.798753339 0.876326117 0.747297076 0.953464323 0.914085232 0.877907311 1 14.94078014 -5.786004198 24.9998983 0.874778047 1.023655299 0.344154856 0.100158305 252.4184298 256888.2245 0.027138877 0.040273906 1.64E-06 5.786004198 0.148877253 GGAEQFMEETER ddPTM_A459_MK2206_30min_R1 7 GGAEQFMEETER 12 0 Q99832-2;Q99832-4;Q99832-3;Q99832 Q99832-2 CCT7 T-complex protein 1 subunit eta 0 ;;;;;; 265.67 8.22E-24 99150700 9034.7 8821.8 8745.72 8188.5 9615 8745.7 10073.1 8572.4 7541.56 7575.53 FALSE TRUE 8266.251322 8247.499217 8152.084893 8819.179689 9232.01419 9240.873976 9401.141878 8497.452411 8325.53215 8514.043849 0.970896024 0.968693533 0.957486834 1.03583912 1.084327771 1.08536838 1.104192326 0.998051286 0.977858735 1 13.0556288 -5.812912241 5.446289047 1.04773988 0.965881006 0.4240872 0.039672934 0.185273403 11.83327284 0.012320096 0.018938425 1.54E-06 5.812912241 -0.081858874 GGAEQFMEETER ddPTM_A459_MK2206_30min_R2 2 GGAEQFMEETER 12 0 Q99832-2;Q99832-4;Q99832-3;Q99832 Q99832-2 CCT7 T-complex protein 1 subunit eta 0 ; 155.99 0.0059716 8740900 46681 59960 48197 54839 54451 52604 56478 42116 52731 59100 FALSE TRUE 50254.93325 56982.47359 49803.86392 50358.47828 52312.98015 54605.88208 49062.37076 47620.70581 57317.44706 57171.57184 0.879019618 0.996692443 0.87112987 0.880830746 0.91501735 0.95512298 0.858160257 0.832943791 1.002551534 1 15.80301033 -8.290306429 24.59170186 1.00127586 0.901456828 0.449722623 0.045336784 646.3124891 550583.6207 0.044592041 0.011522533 5.12E-09 8.290306429 -0.099819032 GGAES(ph)HTFK ddPTM_A459_MK2206_30min_R2 1 GGAESHTFK 9 0 P50238;K4DIB9;H3BRQ4 P50238 CRIP1 Cysteine-rich protein 1 1 GGAES(0.738)HT(0.262)FK 94.616 0.023109 5529700 20960 22514 22748 28566 21765 19789 30933 22880 18569 20033 TRUE FALSE 22564.71372 21395.9875 23506.40697 26232.06642 20910.39674 20542.08426 26871.45994 25870.49456 20184.09805 19379.32485 1.164370477 1.104062585 1.212963153 1.353610955 1.07900543 1.059999996 1.386604546 1.334953346 1.041527412 1 14.24223069 -5.271701734 23.3566925 1.200720316 1.134216532 0.008623849 0.133477774 1028.847961 2341628.174 0.035354116 0.075185178 5.35E-06 5.271701734 -0.066503784 GGAESHTFK ddPTM_A459_MK2206_30min_R1 1 GGAESHTFK 9 0 P50238;K4DIB9;H3BRQ4 P50238 CRIP1 Cysteine-rich protein 1 0 99.136 0.026804 2359700 6835.3 4613.1 4942.6 7217.3 2289.7 3198.6 6080.4 10984 1259 3889.5 FALSE TRUE 6253.921841 4312.786352 4607.110083 7773.177697 2198.4964 3379.701968 5674.78761 10887.96805 1389.877555 4371.360624 1.430657953 0.986600448 1.053930453 1.778205544 0.50293183 0.773146454 1.298174207 2.490750359 0.317950788 1 12.09386669 -10.41084075 15.23543363 1.000006366 1.199445735 0.007401797 0.597997559 0 0 0.56855892 0.137895793 3.88E-11 10.41084075 0.199439369 GGAESHTFK ddPTM_A459_MK2206_30min_R2 2 GGAESHTFK 9 0 P50238;K4DIB9;H3BRQ4 P50238 CRIP1 Cysteine-rich protein 1 0 ; 134.77 0.0039397 36905000 293750 268838 257230 263440 273040 197678 236277 368830 340140 279700 FALSE TRUE 316239.7259 255487.8958 265805.9198 241916.1093 262319.0777 205200.7748 205253.5461 417037.3474 369724.7624 270573.4119 1.168776058 0.944246125 0.982380042 0.894086775 0.969493181 0.758392236 0.758587271 1.541309416 1.366448979 1 18.04566055 -7.758331328 24.99997879 1.34040941 0.922172432 0.514279812 0.16686984 57.29428166 460865.5767 0.081726675 0.044595985 1.74E-08 7.758331328 -0.418236978 GGAGAWLGGPAASLS(ph)PPK ddPTM_A459_MK2206_30min_R2 2 GGAGAWLGGPAASLSPPK 18 0 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 GGAGAWLGGPAAS(0.181)LS(0.819)PPK;GGAGAWLGGPAAS(0.02)LS(0.98)PPK 176.49 2.25E-09 6772500 52422 40266 41970.3 38895 36032 33863 52059 36322.9 30144 48203 TRUE FALSE 56435.46863 38266.44899 43369.56885 35717.15408 34617.20263 35151.68019 45223.59077 41070.42775 32765.87063 46630.14006 1.210278772 0.820637659 0.930075887 0.76596712 0.742378268 0.753840331 0.969836048 0.880769985 0.702675793 1 15.50897514 -4.760044338 24.99714663 0.835669071 1.210279227 0.565923481 0.097016914 25.89577261 463847.5525 0.023985037 0.146006395 1.74E-05 4.760044338 0.374610157 GGAGAWLGGPAASLS(ph)PPKGSSASQGGSK ddPTM_A459_MK2206_30min_R2 2 GGAGAWLGGPAASLSPPKGSSASQGGSK 28 1 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 GGAGAWLGGPAAS(0.076)LS(0.556)PPKGS(0.105)S(0.105)AS(0.14)QGGS(0.018)K;GGAGAWLGGPAAS(0.028)LS(0.956)PPKGS(0.007)S(0.007)AS(0.001)QGGS(0.001)K 74.873 5.80E-05 15601600 85100 92849 99598 92873 88098 67843 96557 70646 63535 85765 TRUE FALSE 91615.32143 88238.25368 102918.5476 85284.97881 84638.82986 70424.8129 83878.94991 79879.67476 69061.15946 82966.49507 1.104244808 1.063540814 1.240483252 1.02794482 1.020156749 0.848834374 1.010997871 0.962794375 0.832398179 1 16.34024122 -6.23208333 2.24262574 0.935844332 1.126698716 0.574121113 0.073000025 0.221116577 2.184432671 0.023705825 0.031049031 5.86E-07 6.23208333 0.190854384 GGAGGGPGGAGGGS(ph)GQR ddPTM_A459_MK2206_30min_R2 2 GGAGGGPGGAGGGSGQR 17 0 Q6VY07-2;Q6VY07 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 GGAGGGPGGAGGGS(1)GQR;GGAGGGPGGAGGGS(1)GQR 146.77 0.00041631 2230760 2093.55 3695.47 2933.28 4970.4 5015.2 2694.04 4337.5 2086.89 2742.4 2133.06 TRUE FALSE 2253.833798 3511.958334 3031.074091 4564.30242 4818.278049 2796.56358 3767.98104 2359.653688 2980.928995 2063.458427 1.092260337 1.701976782 1.468929081 2.21196723 2.335049733 1.355279827 1.826051347 1.14354312 1.4446276 1 11.01084866 -7.762554265 24.99941337 1.220563915 1.732605627 0.295266158 0.364571559 40.63343665 911050.9511 0.194297288 0.101612216 1.73E-08 7.762554265 0.512041712 GGAGGS(ph)PGSSSGSGSSR ddPTM_A459_MK2206_30min_R2 1 GGAGGSPGSSSGSGSSR 17 0 Q8TAE6 Q8TAE6 PPP1R14C Protein phosphatase 1 regulatory subunit 14C 1 GGAGGS(0.915)PGS(0.071)S(0.011)S(0.003)GS(0.001)GSSR 117.48 0.0017183 0 1085.5 579.01 590.54 709.15 839.42 678.45 903.21 5440.5 2520.4 1718.4 TRUE FALSE 1168.606715 550.2572054 610.2283089 651.2101765 806.4601531 704.2688902 784.6174421 6151.59203 2739.619836 1662.328749 0.702993746 0.331015875 0.367092435 0.391745722 0.485138787 0.423664026 0.471998961 3.700586923 1.648061395 1 10.69899001 -7.683916284 12.86340154 2.255100214 0.441866907 0.582214108 0.642235055 0.429745422 69.89363923 0.2778414 0.160345839 2.07E-08 7.683916284 -1.813233307 GGAGTGGTGS(ph)PQASLEILAPEDSQVLQQATR ddPTM_A459_MK2206_30min_R2 1 GGAGTGGTGSPQASLEILAPEDSQVLQQATR 31 0 Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4;Q9Y2J4-3;D6RIC7;D6RBK2;D6RJA4;D6RF61;D6RCL7 Q9Y2J4 AMOTL2 Angiomotin-like protein 2 1 GGAGT(0.114)GGT(0.099)GS(0.771)PQAS(0.016)LEILAPEDSQVLQQATR 78.532 1.38E-05 1797300 1126.7 2941.4 3019.2 3223.9 2577.8 3199.5 2843.4 1102.2 2533.5 3309.1 TRUE FALSE 1212.961018 2795.334353 3119.858621 2960.497057 2476.58262 3321.259214 2470.058164 1246.261324 2753.85925 3201.124338 0.378917184 0.873235169 0.974613383 0.924830386 0.773660239 1.037528963 0.771622063 0.389319874 0.860278752 1 11.644363 -10.20548126 13.9296635 1.000000189 0.785200827 0.088982792 0.213198371 0 0 0.211568482 0.051312894 6.23E-11 10.20548126 -0.214799362 GGAPDPSPGATATPGAPAQPS(ph)SPDAR ddPTM_A459_MK2206_30min_R1 2 GGAPDPSPGATATPGAPAQPSSPDAR 26 0 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 GGAPDPSPGATATPGAPAQPS(0.638)S(0.362)PDAR;GGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDAR 197.32 3.98E-32 27356000 7010 7614.2 7362 6057 7412.3 7134.5 9025.8 6853.9 6863.6 6986.9 TRUE FALSE 6413.762689 7118.514196 6862.287952 6523.511189 7117.052395 7538.449224 8423.705351 6793.977075 7577.095782 7852.48992 0.816780761 0.906529555 0.873899619 0.830757028 0.906343398 0.960007501 1.072743224 0.865200356 0.964929068 1 12.93893447 -6.619541647 3.260605408 0.970667518 0.862078687 0.516656359 0.052701696 0.221303943 4.685549602 0.018540118 0.018614037 2.40E-07 6.619541647 -0.108588831 GGAPDPSPGATATPGAPAQPS(ph)SPDAR ddPTM_A459_MK2206_30min_R2 3 GGAPDPSPGATATPGAPAQPSSPDAR 26 0 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 GGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDAR;GGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDAR;GGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDAR 139.64 1.69E-09 32840500 135174 174080 161923 171483 160393 180049 166745 142075 154857 172638 TRUE FALSE 145523.0254 165435.4403 167321.432 157472.2904 154095.1649 186900.8909 144851.1812 160644.6903 168326.1819 167004.8362 0.871370127 0.990602692 1.001895728 0.94292054 0.922698818 1.119134602 0.867347225 0.961916397 1.007912021 1 17.34953036 -4.756868683 24.9180057 0.976849921 0.871369962 0.211799263 0.06233742 217.0703738 1183248.126 0.015014567 0.116854001 1.75E-05 4.756868683 -0.105479959 GGAPDPSPGATATPGAPAQPSS(ph)PDAR ddPTM_A459_MK2206_30min_R2 1 GGAPDPSPGATATPGAPAQPSSPDAR 26 0 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 GGAPDPSPGAT(0.001)AT(0.01)PGAPAQPS(0.282)S(0.707)PDAR 90.869 2.51E-05 4561400 35570 46934 48144 46855 37755 47270 54731 34653 40149 52172 TRUE FALSE 38293.26655 44603.32581 49749.09693 43026.79662 36272.549 49068.89297 47544.75396 39182.26608 43641.08745 50469.63191 0.758738772 0.883765625 0.985723395 0.852528441 0.718700486 0.972245905 0.942046775 0.776353316 0.864699935 1 15.62312794 GGAPDPSPGATATPGAPAQPSS(ph)PDARR ddPTM_A459_MK2206_30min_R1 1 GGAPDPSPGATATPGAPAQPSSPDARR 27 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 GGAPDPSPGATAT(0.007)PGAPAQPS(0.133)S(0.86)PDARR 87.709 2.40E-05 10777000 958.47 973.46 1419.4 1171.7 1203.6 847.59 1020.7 1187 641.58 656.97 TRUE FALSE 876.9470934 910.0875771 1323.055083 1261.944537 1155.658063 895.5798133 952.6109654 1176.622184 708.2745369 738.3604035 1.187695181 1.232579067 1.791882496 1.709117297 1.565167983 1.212930446 1.290170709 1.593560785 0.959253142 1 9.528181376 -6.76335471 24.96912689 1.25321727 1.510716955 0.253998296 0.239257531 85.91014362 1119951.43 0.086562063 0.080202533 1.72E-07 6.76335471 0.257499685 GGASS(ph)SCCEEEQTQGR ddPTM_A459_MK2206_30min_R1 2 GGASSSCCEEEQTQGR 16 0 Q9UJK0 Q9UJK0 TSR3 Ribosome biogenesis protein TSR3 homolog 1 GGAS(0.172)S(0.663)S(0.165)CCEEEQTQGR;GGAS(0.003)S(0.996)S(0.001)CCEEEQTQGR 365.19 4.19E-197 19496000 3360.3 3398 3077.6 3326.7 3595.5 3415.7 3826.4 2824.7 2583.2 2853.1 TRUE FALSE 3074.488839 3176.789582 2868.701087 3582.92301 3452.283621 3609.093982 3571.147838 2800.003946 2851.732884 3206.563568 0.95881113 0.990714675 0.894634092 1.117371583 1.076630339 1.125533271 1.113699374 0.873210179 0.889342383 1 11.64681229 -7.771424119 24.99993361 0.910957189 1.039887209 0.32817679 0.077490513 254.4701374 637135.3919 0.045439452 0.022229593 1.69E-08 7.771424119 0.12893002 GGASS(ph)SCCEEEQTQGR ddPTM_A459_MK2206_30min_R2 2 GGASSSCCEEEQTQGR 16 0 Q9UJK0 Q9UJK0 TSR3 Ribosome biogenesis protein TSR3 homolog 1 GGASS(0.976)S(0.023)CCEEEQTQGR;GGAS(0.001)S(0.927)S(0.072)CCEEEQTQGR 285.18 3.60E-63 47086000 28500 36159 31048 38213 35435 36607 40197 31260.4 34470 38853 TRUE FALSE 30681.98191 34363.39664 32083.12482 35090.87566 34043.64385 38000.10504 34919.08561 35346.24161 37468.13829 37585.22979 0.816330832 0.914279275 0.853609915 0.933634725 0.905771869 1.011038252 0.929064045 0.940429041 0.996884641 1 15.1978782 -1.522878745 0.2172899 1.000642572 0.118663739 0.671972474 0.034198562 30.80880346 0.391159728 0.053056384 9.490532798 0.03 1.522878745 -0.881978832 GGCGS(ph)PGLQCK ddPTM_A459_MK2206_30min_R1 1 GGCGSPGLQCK 11 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 GGCGS(1)PGLQCK 82.774 0.039349 13729000 3674 4403.4 4128.3 4085 3775.4 3063.4 3808.8 3233.3 3446.3 3127.9 TRUE FALSE 3361.507007 4116.73786 3848.082498 4399.627408 3625.017823 3236.847061 3554.721902 3205.031599 3804.555218 3515.407866 0.956221052 1.171055541 1.094633296 1.251526871 1.031179869 0.920760032 1.01118335 0.911709742 1.082251438 1 11.77947637 -6.512381184 24.76698354 0.980697026 1.123044123 0.368752394 0.082107876 443.9298369 1047369.896 0.025127038 0.026718377 3.07E-07 6.512381184 0.142347097 GGCGS(ph)PGLQCK ddPTM_A459_MK2206_30min_R2 4 GGCGSPGLQCK 11 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 GGCGS(1)PGLQCK;GGCGS(1)PGLQCK;GGCGS(1)PGLQCK;GGCGS(1)PGLQCK 108.72 0.0098109 79536000 177831 187379 178702 199447 198057 178145 206154 157338 156562 182050 TRUE FALSE 191445.8781 178074.0313 184659.8355 183151.5421 190280.287 184924.4328 179085.7322 177902.6168 170179.4798 176109.7234 1.087082953 1.011153887 1.048549915 1.039985405 1.080464402 1.050052372 1.016898606 1.010180548 0.966326427 1 17.42611504 -7.624354169 1.809264085 0.986248723 1.051358515 0.615757678 0.021927684 0.246501717 1.580929086 0.014586641 0.00662596 2.37E-08 7.624354169 0.065109792 GGCPGGEATLS(ph)QPPPR ddPTM_A459_MK2206_30min_R1 4 GGCPGGEATLSQPPPR 16 0 P20290 P20290 BTF3 Transcription factor BTF3 1 GGCPGGEAT(0.003)LS(0.997)QPPPR;GGCPGGEAT(0.001)LS(0.999)QPPPR;GGCPGGEAT(0.013)LS(0.987)QPPPR;GGCPGGEAT(0.003)LS(0.997)QPPPR 153.94 0.0001283 103382000 13089.3 13584.75 13265.6 11225.4 12233.88 10648.24 12312.6 11636.19 12365.09 11255.67 TRUE FALSE 11975.9863 12700.38031 12365.16803 12089.98225 11746.57865 11251.13415 11491.24892 11534.45602 13650.48535 12650.10738 0.946710249 1.003974111 0.977475342 0.95572171 0.928575411 0.88941017 0.908391413 0.911806965 1.079080592 1 13.62686201 -8.257774539 24.9973904 1.039540299 0.940991475 0.540504338 0.036611108 252.3246196 1721102.918 0.030232719 0.010397411 5.52E-09 8.257774539 -0.098548824 GGCPGGEATLS(ph)QPPPR ddPTM_A459_MK2206_30min_R2 5 GGCPGGEATLSQPPPR 16 0 P20290 P20290 BTF3 Transcription factor BTF3 1 GGCPGGEATLS(1)QPPPR;GGCPGGEAT(0.001)LS(0.999)QPPPR;GGCPGGEAT(0.004)LS(0.996)QPPPR;GGCPGGEAT(0.002)LS(0.998)QPPPR;GGCPGGEAT(0.002)LS(0.998)QPPPR 199.15 8.62E-07 99850000 70116.4 84272 74921.3 89731 92642 81038 78486.7 57751.4 61161 80858.1 TRUE FALSE 75484.56549 80087.17502 77419.13875 82399.69026 89004.40959 84121.95788 68181.30201 65299.70627 66480.67323 78219.70682 0.96503258 1.023874651 0.989765136 1.053439007 1.137877054 1.075457341 0.871663993 0.834824227 0.849922301 1 16.25524451 -7.26761109 24.619682 0.875337968 1.042786054 0.59394266 0.061056614 277.5781364 1107285.746 0.026199243 0.01817391 5.40E-08 7.26761109 0.167448086 GGDDYS(ph)EDEGDSSVSR ddPTM_A459_MK2206_30min_R2 2 GGDDYSEDEGDSSVSR 16 0 A6NDA1;Q99871-3;Q99871;Q99871-2 A6NDA1 HAUS7 HAUS augmin-like complex subunit 7 1 GGDDYS(0.966)EDEGDS(0.033)S(0.001)VSR;GGDDYS(1)EDEGDSSVSR 270.79 1.63E-50 13150000 18658.2 23349 21069 24097 27642 25689 26662 22488 25531 23159 TRUE FALSE 20086.68614 22189.52261 21771.42994 22128.19802 26556.63619 26666.6129 23161.24737 25427.25881 27751.64023 22403.32373 0.896594023 0.990456723 0.971794641 0.987719424 1.185388227 1.190297173 1.033830857 1.134977074 1.238728707 1 14.45142516 -6.160683259 5.131936523 1.135084254 0.960689028 0.578151421 0.070853022 0.165408848 6.718166223 0.020962821 0.027326382 6.91E-07 6.160683259 -0.174395226 GGDHVPVS(ph)HEQPR ddPTM_A459_MK2206_30min_R2 2 GGDHVPVSHEQPR 13 0 Q9HBR0 Q9HBR0 SLC38A10 Putative sodium-coupled neutral amino acid transporter 10 1 GGDHVPVS(1)HEQPR;GGDHVPVS(1)HEQPR 83.37 0.020616 6577700 51976 48889 48315 43274 44837 54965 67365 39599 60292 41362 TRUE FALSE 55955.32252 46461.24335 49925.79799 39738.37577 43076.47409 57056.73159 58519.89458 44774.72526 65536.08918 40012.36133 1.398450895 1.161172243 1.247759351 0.993152477 1.076579154 1.425977615 1.462545389 1.119022317 1.637896065 1 15.28815815 -6.763576939 24.99812923 1.344868241 1.168523691 0.133158131 0.193556248 104.8789941 1226517.147 0.06407052 0.059265092 1.72E-07 6.763576939 -0.176344551 GGDISVCEWYQR ddPTM_A459_MK2206_30min_R1 2 GGDISVCEWYQR 12 0 P14854 P14854 COX6B1 Cytochrome c oxidase subunit 6B1 0 ; 169.99 0.0044992 17131400 3477.9 3202.6 3335.8 3106.8 3802.7 2706.3 3328.9 3131.6 2779.34 2463.11 FALSE TRUE 3182.086342 2994.110158 3109.37519 3346.086274 3651.230407 2859.528367 3106.835155 3104.220751 3068.262339 2768.258662 1.14949025 1.081586124 1.123224225 1.208733244 1.318962876 1.032970078 1.122306668 1.121362246 1.108372704 1 11.43476304 GGDLMAYDRR ddPTM_A459_MK2206_30min_R1 4 GGDLMAYDRR 10 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ;;; 136.57 0.0024916 97095000 15358.9 16307.6 15046.2 13945.2 18789.6 14762.1 15845.9 17148.9 11411.5 8812.4 FALSE TRUE 14052.5449 15245.97228 14024.90587 15019.26172 18041.17044 15597.91734 14788.84892 16998.96898 12597.76626 9904.146642 1.418854689 1.539352438 1.416064036 1.516461969 1.821577476 1.574887561 1.493197694 1.716348676 1.271968875 1 13.27381696 -8.51432153 4.411638829 1.000829788 1.56036567 0.69772606 0.118935104 0.093240668 5.627443798 0.118905635 0.031050449 3.06E-09 8.51432153 0.559535882 GGDLMAYDRR ddPTM_A459_MK2206_30min_R2 2 GGDLMAYDRR 10 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 136.57 0.0024916 49355000 122537 209023 178550 176836 227095 215957 201281 151786 211059 179195 FALSE TRUE 131918.5269 198643.2218 184502.7679 162387.9331 218178.1092 224175.395 174852.5629 171624.9514 229416.5303 173347.8818 0.761004551 1.145922406 1.064349711 0.936774833 1.258614221 1.293211042 1.008680124 0.990060851 1.323445824 1 17.40331068 -4.758174769 24.98772793 1.112964633 0.76100406 0.394986812 0.130858321 98.02026141 750135.2456 0.032876641 0.229881215 1.75E-05 4.758174769 -0.351960572 GGDS(ph)IGETPTPGASK ddPTM_A459_MK2206_30min_R2 1 GGDSIGETPTPGASK 15 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 GGDS(1)IGETPTPGASK 90.725 0.015269 7148300 28688 30178 28894 33250 29744 24418 37059 27908 24067 31864 TRUE FALSE 30884.37534 28679.4044 29857.31154 30533.36864 28576.10111 25347.2441 32193.10878 31555.67142 26160.30416 30824.28029 1.001949601 0.930416027 0.968629641 0.990562256 0.927064666 0.822314223 1.044407476 1.02372776 0.848691483 1 14.91177959 -8.249090003 24.98664352 0.924345722 0.960353637 0.0489623 0.068043396 2567.302941 5194479.673 0.047263322 0.017521919 5.64E-09 8.249090003 0.036007915 GGDSGLDGLGGPGVQLGS(ph)PDKK ddPTM_A459_MK2206_30min_R2 1 GGDSGLDGLGGPGVQLGSPDKK 22 1 Q9Y3Y4-2 Q9Y3Y4-2 1 GGDSGLDGLGGPGVQLGS(1)PDKK 105.52 3.34E-05 13638000 54047 41805 46960 46510 35483 23886 43119 35613 35327 51317 TRUE FALSE 58184.87988 39729.02449 48525.62296 42709.98422 34089.75913 24794.99847 37457.4235 40267.74138 38399.6786 49642.53049 1.172077235 0.800302162 0.977500995 0.860350667 0.686704702 0.499470882 0.754542992 0.811154085 0.773523795 1 15.59928904 -1.522879248 0.704883116 0.751104348 51.49111612 0.400247607 0.135994965 299.3255271 1.558015439 0.055190104 23956.00542 0.029999965 1.522879248 50.74001177 GGDSIGETPTPGAS(ph)K ddPTM_A459_MK2206_30min_R2 1 GGDSIGETPTPGASK 15 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 GGDS(0.001)IGET(0.355)PT(0.025)PGAS(0.619)K 78.326 0.033194 2912500 20128 22545 22441 18172 19724 13495 24902 19131 18662 25206 TRUE FALSE 21669.01516 21425.44808 23189.17174 16687.28947 18949.53665 14008.56168 21632.33749 21631.48739 20285.18703 24383.53028 0.888674236 0.878685237 0.951017817 0.684367246 0.777144918 0.574509167 0.887170038 0.887135174 0.831921661 1 14.5736194 -10.12566758 12.56761908 0.999999996 0.815350179 0.205831723 0.107237964 0 0 0.110339396 0.026761234 7.49E-11 10.12566758 -0.184649817 GGDVS(ph)PSPYSSSSWR ddPTM_A459_MK2206_30min_R1 3 GGDVSPSPYSSSSWR 15 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 GGDVS(0.992)PS(0.008)PYSSSSWR;GGDVS(0.999)PS(0.001)PYSSSSWR;GGDVS(0.948)PS(0.05)PYSSS(0.001)SWR 196.97 2.33E-05 156800100 6422.3 7039.9 6596.7 5805.1 6463.3 6027.2 6804.3 5486.4 5143.7 5157.7 TRUE FALSE 5876.04966 6581.60123 6148.934383 6252.209808 6205.853075 6368.454855 6350.397562 5438.432983 5678.406022 5796.674815 1.013693169 1.135409772 1.060769248 1.07858557 1.070588445 1.098639316 1.095524204 0.938198736 0.979597132 1 12.50100984 -7.756315707 24.99967641 0.969173442 1.080908529 0.692179963 0.032484077 60.91247292 297211.2008 0.014757148 0.008186527 1.75E-08 7.756315707 0.111735088 GGDVS(ph)PSPYSSSSWR ddPTM_A459_MK2206_30min_R2 3 GGDVSPSPYSSSSWR 15 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 GGDVS(0.982)PS(0.018)PYSSSSWR;GGDVS(0.999)PS(0.001)PYSSSSWR;GGDVS(0.997)PS(0.003)PYSSSSWR 198.38 2.54E-05 209292000 117192 165188 119051 169416 159226 148058 167374 109070 136622 150240 TRUE FALSE 126164.3096 156985.0041 123020.1009 155574.1709 152973.9872 153692.4509 145397.5927 123325.8235 148505.1346 145337.6811 0.868077079 1.080139733 0.846443262 1.070432456 1.052541819 1.057485229 1.000412224 0.848546795 1.021793753 1 17.14904927 -4.731778362 24.47357437 0.994038978 0.868076104 0.18841286 0.080309569 5128.455856 4231234.989 0.020059317 2.260864831 1.85E-05 4.731778362 -0.125962875 GGET(ph)PEGLATSVVHYGAGAK ddPTM_A459_MK2206_30min_R1 2 GGETPEGLATSVVHYGAGAK 20 0 Q9ULL5;Q9ULL5-2 Q9ULL5 PRR12 Proline-rich protein 12 1 GGET(1)PEGLATSVVHYGAGAK;GGET(1)PEGLATSVVHYGAGAK 207.1 1.66E-16 12042200 5957.9 3774.8 4224.7 3603.9 6538.5 5314.4 5335.2 4457.5 3175 3374 TRUE FALSE 5451.149319 3529.059834 3937.939135 3881.473002 6278.057699 5615.296735 4979.298543 4418.528547 3505.052612 3791.996592 1.437540669 0.930660075 1.038486992 1.023596121 1.655607421 1.480828529 1.313107336 1.16522482 0.924329051 1 11.88874195 -8.105186241 3.774260683 0.965276713 1.25964044 0.241598276 0.213764481 0.406084521 10.01676983 0.180322824 0.062090798 7.85E-09 8.105186241 0.294363727 GGET(ph)PGSEQWK ddPTM_A459_MK2206_30min_R1 1 GGETPGSEQWK 11 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3;D6RHI8 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 GGET(0.999)PGS(0.001)EQWK 124.48 0.0083236 23708000 4946.1 6441 6568.9 6110.9 6105.1 6385.4 5714.9 5311.2 4883.2 5533.6 TRUE FALSE 4525.408222 6021.689729 6123.02137 6581.562577 5861.920939 6746.93583 5333.669448 5264.764738 5390.826115 6219.144145 0.727657716 0.968250549 0.984544051 1.058274647 0.942560713 1.084865646 0.857621133 0.846541681 0.866811572 1 12.60250034 -9.948232286 10.01296486 1.000000894 0.933942398 0.040801227 0.101277799 0 0 0.101511336 0.024620115 1.13E-10 9.948232286 -0.066058496 GGET(ph)PGSEQWK ddPTM_A459_MK2206_30min_R2 3 GGETPGSEQWK 11 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3;D6RHI8 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 GGET(0.973)PGS(0.027)EQWK;GGET(0.998)PGS(0.002)EQWK;GGET(0.999)PGS(0.001)EQWK 146.67 0.0015903 81875000 154903 166110 166814 197585 230986 167663 210885 128761 132859 177546 TRUE FALSE 166762.4928 157861.2189 172375.4955 181441.6735 221916.329 174043.533 183195.5462 145590.5048 144414.8357 171752.6886 0.970945458 0.919119347 1.003626185 1.056412421 1.292069026 1.013338041 1.066624038 0.847675259 0.840830131 1 17.38997316 -7.757843566 24.99385113 0.883189504 1.048114189 0.312824711 0.101197318 109.1739787 758866.3482 0.053846131 0.02951025 1.75E-08 7.757843566 0.164924685 GGFDS(ph)PFYR ddPTM_A459_MK2206_30min_R1 2 GGFDSPFYR 9 0 A0A2R8Y6S1;A0A2R8YFV7;A0A2R8Y5N2;A0A2R8Y5S3;Q92574-2;Q92574;A0A2R8YEH9 A0A2R8Y6S1 TSC1 Hamartin 1 GGFDS(1)PFYR;GGFDS(1)PFYR 123.11 0.0057306 30629000 6434 5190.7 5836.7 5096.4 6692.7 5224.7 6509.9 5706 5488 4896.2 TRUE FALSE 5886.754514 4852.784487 5440.521066 5488.925611 6426.115587 5520.517999 6075.636449 5656.113044 6058.497239 5502.77822 1.069778624 0.881878988 0.988686232 0.997482615 1.167794763 1.003223786 1.104103456 1.027864983 1.100988809 1 12.42594447 -6.02008796 24.08281009 1.068745326 0.974089917 0.289744209 0.063767595 525.0096636 629417.7816 0.017497212 0.022923076 9.55E-07 6.02008796 -0.094655409 GGFDS(ph)PFYR ddPTM_A459_MK2206_30min_R2 3 GGFDSPFYR 9 0 A0A2R8Y6S1;A0A2R8YFV7;A0A2R8Y5N2;A0A2R8Y5S3;Q92574-2;Q92574;A0A2R8YEH9 A0A2R8Y6S1 TSC1 Hamartin 1 GGFDS(0.999)PFY(0.001)R;GGFDS(0.984)PFY(0.016)R;GGFDS(1)PFYR 98.04 0.020054 39697600 116078 130222 126954 146636 133191 136580 129835 106046 121762 132601 TRUE FALSE 124965.0209 123755.3648 131186.583 134655.3697 127961.2521 141777.6476 112787.5085 119906.5763 132352.6387 128274.2402 0.974201996 0.964771763 1.022704034 1.049745993 0.997560008 1.105269829 0.879268576 0.934767387 1.031794368 1 16.96887195 GGGAGGNS(ph)DSDNLDSTDCNSESSSGGK ddPTM_A459_MK2206_30min_R1 1 GGGAGGNSDSDNLDSTDCNSESSSGGK 27 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 GGGAGGNS(0.713)DS(0.287)DNLDSTDCNSESSSGGK 153.48 1.42E-14 5418500 1674 1312.4 1203.7 1606.7 1847.3 1663.8 1495.7 1384.9 1111 1195.9 TRUE FALSE 1531.617509 1226.962521 1121.996198 1730.448312 1773.718129 1758.002918 1395.924582 1372.791965 1226.492426 1344.057121 1.13954793 0.912879745 0.834783121 1.287481228 1.319674664 1.307982296 1.038590221 1.021379184 0.912529986 1 10.39237874 -7.642697156 3.299779245 0.97204298 1.127804583 0.170321139 0.15339632 0.535413032 11.43485981 0.094972271 0.049657757 2.28E-08 7.642697156 0.155761603 GGGAPWPGGAQT(ph)YSPSSTCR ddPTM_A459_MK2206_30min_R2 2 GGGAPWPGGAQTYSPSSTCR 20 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 GGGAPWPGGAQT(0.982)Y(0.001)S(0.018)PSSTCR;GGGAPWPGGAQT(0.76)YS(0.209)PS(0.03)S(0.001)TCR 183.71 2.22E-16 9931700 47173 53049.4 45980.6 51951 55483.1 66109.7 62874.3 46215.3 52643.8 62268.4 TRUE FALSE 50784.60115 50415.04394 47513.57025 47706.43712 53304.55471 68625.55096 54618.82888 52255.79839 57222.66257 60236.58721 0.843085631 0.836950536 0.788782573 0.791984396 0.8849199 1.139266916 0.906738436 0.86750928 0.949965216 1 15.87835241 -6.526175881 24.99716103 0.966048561 0.81781541 0.539090849 0.068672074 86.47766703 655619.0445 0.023802449 0.023921184 2.98E-07 6.526175881 -0.148233152 GGGAPWPGGAQTYS(ph)PSSTCR ddPTM_A459_MK2206_30min_R2 2 GGGAPWPGGAQTYSPSSTCR 20 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 GGGAPWPGGAQT(0.085)Y(0.001)S(0.489)PS(0.256)S(0.085)T(0.085)CR;GGGAPWPGGAQT(0.059)YS(0.871)PS(0.02)S(0.02)T(0.029)CR 107.33 0.0012284 10860000 18866.5 17194 16399.1 18497.3 18534 19753 27563.3 17022.2 18996.9 21351.3 TRUE FALSE 20310.93375 16340.17096 16945.83781 16986.01142 17806.26203 20504.71426 23944.2056 19247.05999 20649.21602 20654.60883 0.983360852 0.791115005 0.820438574 0.822383593 0.862096309 0.992742803 1.159266961 0.931853038 0.999738905 1 14.33417612 -6.784763171 4.299948108 1.024160561 0.846984815 0.559502598 0.071544998 0.150184891 6.328170631 0.025472217 0.023372491 1.64E-07 6.784763171 -0.177175746 GGGDVLEPVSSDSLS(ph)TK ddPTM_A459_MK2206_30min_R2 2 GGGDVLEPVSSDSLSTK 17 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 GGGDVLEPVSS(0.002)DS(0.022)LS(0.673)T(0.303)K;GGGDVLEPVS(0.138)S(0.112)DS(0.112)LS(0.631)T(0.007)K 123.03 0.0011007 2989100 18926.5 24773 26054 26469 22138 21786.9 30006 23478.5 20248.3 27262.8 TRUE FALSE 20375.52739 23542.80884 26922.62736 24306.39803 21268.75089 22616.01575 26066.17616 26547.22056 22009.46053 26373.21707 0.77258407 0.892678689 1.02083213 0.921631895 0.806452653 0.857537239 0.988357851 1.006597735 0.83453833 1 14.68678594 -7.259748579 24.99229238 0.957923291 0.884397518 0.19751612 0.077238765 301.5703226 4457671.725 0.032260117 0.023667715 5.50E-08 7.259748579 -0.073525773 GGGESLQEAS(ph)PR ddPTM_A459_MK2206_30min_R2 2 GGGESLQEASPR 12 0 P98175-5 P98175-5 RBM10 RNA-binding protein 10 1 GGGESLQEAS(1)PR;GGGESLQEAS(1)PR 151.3 0.0005262 26512000 75211 92097 80049 93303 75575 108824 92497 76533 75665 82567 TRUE FALSE 80969.21199 87523.5969 82717.79371 85679.84644 72607.54577 112965.3736 80352.03279 86536.12588 82246.20493 79872.84555 1.013726398 1.095786638 1.035618465 1.072703068 0.909039177 1.414315125 1.005999376 1.0834236 1.029714221 1 16.28541749 -4.750017932 23.4457405 1.076903055 1.013726085 0.017546509 0.125425098 1228.924017 2522346.527 0.030217608 0.430394511 1.78E-05 4.750017932 -0.06317697 GGGGEGGGEAS(ph)PDR ddPTM_A459_MK2206_30min_R2 1 GGGGEGGGEASPDR 14 0 A0A0D9SGA5;A0A0D9SGD0 A0A0D9SGA5 SLC12A5 1 GGGGEGGGEAS(1)PDR 77.776 0.039466 1400700 3789.8 3386.7 2032.2 3062.6 2732.9 2201.7 2464.3 2127 1903.8 2604.6 TRUE FALSE 4079.950002 3218.521403 2099.952534 2812.375783 2625.592614 2285.487236 2140.73445 2405.006203 2069.389083 2519.612115 1.619277022 1.277387652 0.833442783 1.116193944 1.042062228 0.907078999 0.849628575 0.954514462 0.821312562 1 11.29898594 -4.958435384 2.674728469 0.944292354 1.645511968 0.844167601 0.092661632 0.123205815 1.525515064 0.025240112 0.163017145 1.10E-05 4.958435384 0.701219614 GGGGEGGGEAS(ph)PDRQGSLPSR ddPTM_A459_MK2206_30min_R1 1 GGGGEGGGEASPDRQGSLPSR 21 1 A0A0D9SGA5;A0A0D9SGD0 A0A0D9SGA5 SLC12A5 1 GGGGEGGGEAS(1)PDRQGSLPSR 160.47 4.73E-07 2664700 897.21 1080.6 714.27 695.19 1030.7 762.96 798.99 1045.9 666.98 531.21 TRUE FALSE 820.8975781 1010.252744 665.7873425 748.7336543 989.6450365 806.1581359 745.6908349 1036.755807 736.3149578 597.0203052 1.374991053 1.692158097 1.115183749 1.25411757 1.657640499 1.35030271 1.249020893 1.736550327 1.233316441 1 9.22163619 -8.526413498 24.58625194 0.999999984 1.424318285 0.321022949 0.196682325 353.8257569 2461069.668 0.186678705 0.048200234 2.98E-09 8.526413498 0.424318301 GGGGGGQGAEGPPGT(ph)PR ddPTM_A459_MK2206_30min_R1 4 GGGGGGQGAEGPPGTPR 17 0 Q8TER5;Q8TER5-4;Q8TER5-3;G3V485;G3V3N2;G3V5C1 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 GGGGGGQGAEGPPGT(1)PR;GGGGGGQGAEGPPGT(1)PR;GGGGGGQGAEGPPGT(1)PR;GGGGGGQGAEGPPGT(1)PR 221.34 1.20E-11 17785900 4402.31 4177.53 3901.55 3656.56 5065.22 4034.28 5451.92 5023.87 4293.28 4482.24 TRUE FALSE 4027.870417 3905.572038 3636.723656 3938.188885 4863.461562 4262.697447 5088.232364 4979.946834 4739.58182 5037.53373 0.7995719 0.775294469 0.72192542 0.781769234 0.965444962 0.846187376 1.010064178 0.988568435 0.940853615 1 12.29850188 -6.233991647 5.375627543 0.955304898 0.764982852 0.798049473 0.046535488 0.085555263 7.468262103 0.014472826 0.018266507 5.83E-07 6.233991647 -0.190322046 GGGGGGQGAEGPPGT(ph)PR ddPTM_A459_MK2206_30min_R2 3 GGGGGGQGAEGPPGTPR 17 0 Q8TER5;Q8TER5-4;Q8TER5-3;G3V485;G3V3N2;G3V5C1 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 GGGGGGQGAEGPPGT(1)PR;GGGGGGQGAEGPPGT(1)PR;GGGGGGQGAEGPPGT(1)PR 145.79 0.0010726 24356800 35779.6 35891.8 40830.3 46752.8 30865.1 45241.1 30708.4 28043.1 32936.1 38321.3 TRUE FALSE 38518.91369 34109.4654 42191.56182 42932.94669 29653.18109 46962.78176 26676.35019 31708.42946 35800.82244 37070.87912 1.039061242 0.920114824 1.138132217 1.158131334 0.799904987 1.266837552 0.719603927 0.855346035 0.965739775 1 15.17799871 -7.27617686 24.97929656 0.873117959 1.044674097 0.256002389 0.139636062 1132.104595 1918853.091 0.056318045 0.038149388 5.29E-08 7.27617686 0.171556137 GGGGGQDNGLEGLGNDS(ph)R ddPTM_A459_MK2206_30min_R1 5 GGGGGQDNGLEGLGNDSR 18 0 P08621;P08621-4;P08621-2 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R 265.42 2.35E-43 141475200 9682.9 10313.6 10723.9 7660.29 10572.2 9808.8 12933.7 9172.9 12689.9 13506.9 TRUE FALSE 8859.318508 9642.182765 9995.991546 8250.286863 10151.08689 10364.16578 12070.91647 9092.702302 14009.06052 15180.23674 0.583608718 0.635179999 0.658487197 0.543488682 0.668704122 0.682740721 0.795173137 0.598982905 0.922848619 1 13.88990667 -8.450174235 0.52707365 1.015411442 0.608168436 0.734959 0.073418098 0.485995182 0.333099595 0.078836841 0.037980229 3.55E-09 8.450174235 -0.407243005 GGGGGQDNGLEGLGNDS(ph)R ddPTM_A459_MK2206_30min_R2 5 GGGGGQDNGLEGLGNDSR 18 0 P08621;P08621-4;P08621-2 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R 260.98 1.16E-42 285465800 491685.2 557409.3 532508.6 610838.3 429513.9 416932.3 577298.9 473749.3 339411.8 420725.1 TRUE FALSE 529328.997 529729.1647 550262.1709 560930.8569 412649.0262 432798.9508 501498.861 535669.9601 368933.2248 406996.8744 1.300572634 1.301555855 1.352005889 1.378219078 1.013887457 1.063396252 1.232193396 1.316152516 0.906476801 1 18.63465819 -6.144925611 0.226588847 0.971079494 1.501331477 0.411981684 0.125403506 6.930051067 0.578753914 0.280834889 1.069501957 7.16E-07 6.144925611 0.530251983 GGGGNFGPGPGS(ph)NFR ddPTM_A459_MK2206_30min_R1 1 GGGGNFGPGPGSNFR 15 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GGGGNFGPGPGS(1)NFR 93.716 0.012186 8054700 1045.5 1263.6 1188.9 1178.3 1613.2 1057.3 1256.9 1090.9 1392.5 1119 TRUE FALSE 956.5747349 1181.33941 1108.20078 1269.05287 1548.942828 1117.163412 1173.054494 1081.362376 1537.255358 1257.630168 0.76061688 0.939337685 0.881181772 1.00908272 1.23163619 0.888308376 0.932749964 0.859841314 1.222342941 1 10.29649202 -4.457300126 0.999225344 1.008038069 0.497271871 0.279789467 0.122206237 4.838894118 2.519297622 0.040473005 3.094170631 3.49E-05 4.457300126 -0.510766198 GGGGNFGPGPGS(ph)NFR ddPTM_A459_MK2206_30min_R2 1 GGGGNFGPGPGSNFR 15 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GGGGNFGPGPGS(1)NFR 135.61 0.00040902 7058200 26436 20739 19931 27125 19614 25283 26227 23424 17687 26766 TRUE FALSE 28459.96049 19709.13142 20595.48959 24908.80073 18843.85581 26245.16228 22783.3634 26485.59723 19225.38329 25892.62761 1.099153045 0.761186995 0.795419063 0.962003591 0.727769158 1.013615253 0.879917007 1.022901098 0.742504144 1 14.66025376 -6.799773867 24.99968367 0.929976774 0.864177242 0.058130786 0.125264169 509.430685 332219.595 0.041917888 0.036968817 1.59E-07 6.799773867 -0.065799532 GGGGNFGPGPGSNFR ddPTM_A459_MK2206_30min_R2 1 GGGGNFGPGPGSNFR 15 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 148.13 0.0043024 5488400 14806 12873 9225.1 12038 11439 10632 14368 8647.2 10636 13558 FALSE TRUE 15939.55874 12233.74554 9532.66023 11054.45689 10989.84738 11036.60821 12481.46434 9777.41873 11561.10005 13115.60357 1.215312636 0.93276268 0.726818265 0.842847745 0.837921589 0.841486871 0.951650015 0.745479892 0.881476784 1 13.67899658 -4.803255602 3.525778307 0.845586489 1.250339254 0.655681815 0.078256219 0.147969697 3.079542836 0.018632343 0.154802103 1.57E-05 4.803255602 0.404752765 GGGPLILLDLNDENS(ph)NQSFHSEGSLQK ddPTM_A459_MK2206_30min_R1 1 GGGPLILLDLNDENSNQSFHSEGSLQK 27 0 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 1 GGGPLILLDLNDENS(0.973)NQS(0.025)FHS(0.002)EGSLQK 77.693 0.002082 0 1000.2 663.99 799.06 643.09 1183.1 1244.6 1205.4 802.48 489.89 713.56 TRUE FALSE 915.1277377 620.7641303 744.8220335 692.6209032 1135.974622 1315.068176 1124.989965 795.464002 540.8158186 801.9611999 1.141112236 0.774057561 0.92875071 0.863658869 1.416495738 1.639815214 1.402798496 0.991898364 0.674366564 1 9.647388628 -6.243168594 24.33550423 1.220531768 0.916110425 0.178094435 0.268391766 999.679228 1331506.858 0.087194022 0.112320992 5.71E-07 6.243168594 -0.304421343 GGGQSVQFTDIETLKQES(ph)PNGSR ddPTM_A459_MK2206_30min_R1 3 GGGQSVQFTDIETLKQESPNGSR 23 1 Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23 1 GGGQSVQFTDIETLKQES(0.984)PNGS(0.016)R;GGGQSVQFTDIET(0.001)LKQES(0.987)PNGS(0.011)R;GGGQSVQFTDIETLKQES(0.937)PNGS(0.063)R 135.06 3.19E-06 126445000 10848.8 10473 10407.2 10721.9 9306.6 8996.9 8230.8 9092.1 8551.6 6543.1 TRUE FALSE 9926.052591 9791.205796 9700.78826 11547.7026 8935.898415 9506.296703 7681.73835 9012.608728 9440.569422 7353.708626 1.349802269 1.331465019 1.319169518 1.570323653 1.215155355 1.292721426 1.044607387 1.225586869 1.283783449 1 12.8442563 -6.680735331 2.188392738 1.165287954 1.380387458 0.464808041 0.111355331 0.295313084 2.898264361 0.041697406 0.040499986 2.09E-07 6.680735331 0.215099504 GGGQSVQFTDIETLKQES(ph)PNGSR ddPTM_A459_MK2206_30min_R2 3 GGGQSVQFTDIETLKQESPNGSR 23 1 Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23 1 GGGQSVQFTDIET(0.069)LKQES(0.921)PNGS(0.01)R;GGGQSVQFT(0.003)DIET(0.027)LKQES(0.889)PNGS(0.08)R;GGGQSVQFTDIET(0.001)LKQES(0.995)PNGS(0.004)R 128.55 4.79E-06 111600800 237815 281109 254888 252340 289837 245060 274053 230754 267808 290884 TRUE FALSE 256022.2992 267149.5358 263385.8387 231723.0148 278456.5431 254385.93 238069.5119 260914.3401 291101.4558 281392.4789 0.909840591 0.949384066 0.936008808 0.823486881 0.989566403 0.904025335 0.846040778 0.927225707 1.034503327 1 18.10222424 -8.189764912 5.216508283 1.016895309 0.909369648 0.467380582 0.045706947 0.1776977 8.852200192 0.03307829 0.011715279 6.46E-09 8.189764912 -0.10752566 GGGS(ph)CSGSAGGGGSGSLPSQR ddPTM_A459_MK2206_30min_R1 1 GGGSCSGSAGGGGSGSLPSQR 21 0 O15234 O15234 CASC3 Protein CASC3 1 GGGS(0.33)CS(0.33)GS(0.33)AGGGGS(0.01)GSLPSQR 265.38 2.67E-49 2616900 379.44 398.98 296.01 204.32 404.1 324.35 387.69 338.91 371.56 449.41 TRUE FALSE 347.1666355 373.0063295 275.9176659 220.0567618 388.0038413 342.7144167 361.8279075 335.9469456 410.1849916 505.0863037 0.687341219 0.738500187 0.546278258 0.435681507 0.768193155 0.67852645 0.71636848 0.665127807 0.81210872 1 8.980386111 -8.803804015 0.585746486 1.009902229 0.628598318 0.589538265 0.091521936 0.963676209 0.68144604 0.11432395 0.043884569 1.57E-09 8.803804015 -0.381303911 GGGS(ph)CSGSAGGGGSGSLPSQR ddPTM_A459_MK2206_30min_R2 1 GGGSCSGSAGGGGSGSLPSQR 21 0 O15234 O15234 CASC3 Protein CASC3 1 GGGS(0.969)CS(0.031)GSAGGGGSGSLPSQR 203.81 5.44E-32 0 3316.2 3123.4 2385.6 4676 4165 4920.2 4090.2 3823.9 3396 4519.4 TRUE FALSE 3570.090822 2968.296498 2465.134713 4293.955842 4001.461173 5107.441659 3553.151827 4323.696859 3691.377941 4371.932348 0.816593336 0.678943831 0.563854725 0.982164293 0.915261457 1.168234376 0.812718849 0.988967009 0.844335559 1 12.09405536 -5.774595382 24.99998665 0.959176141 0.685711952 0.574466315 0.107414837 152.6675019 290109.5967 0.029719992 0.044379201 1.68E-06 5.774595382 -0.273464189 GGGSCS(ph)GSAGGGGSGSLPSQR ddPTM_A459_MK2206_30min_R2 1 GGGSCSGSAGGGGSGSLPSQR 21 0 O15234 O15234 CASC3 Protein CASC3 1 GGGS(0.271)CS(0.729)GSAGGGGSGSLPSQR 263.19 9.96E-114 0 4740.1 4058.3 4650.4 5193.7 4255.6 4591.4 4689.3 3089.8 2567.5 4641.2 TRUE FALSE 5103.005701 3856.770723 4805.442015 4769.358096 4088.503761 4766.128944 4073.589277 3493.647469 2790.816509 4489.758024 1.136588135 0.859015275 1.070312028 1.062275087 0.910628978 1.061555861 0.907307088 0.77813714 0.621596196 1 12.13242198 -7.582778732 3.2806175 0.775188921 1.008744236 0.411283718 0.115096945 0.219214941 4.799547119 0.05674444 0.030897128 2.61E-08 7.582778732 0.233555315 GGGSCSGSAGGGGS(ph)GSLPSQR ddPTM_A459_MK2206_30min_R1 1 GGGSCSGSAGGGGSGSLPSQR 21 0 O15234 O15234 CASC3 Protein CASC3 1 GGGSCSGSAGGGGS(0.915)GS(0.085)LPSQR 193.71 1.73E-16 14576000 797.9 752.59 1028.2 738.75 990.76 1069.6 1506.4 959.89 932.85 1116.2 TRUE FALSE 730.0344151 703.5962542 958.4086487 795.648653 951.2959312 1130.159828 1405.910805 951.4977829 1029.823096 1254.483283 0.58194033 0.560865389 0.763986784 0.634244126 0.758316945 0.900896682 1.120709079 0.75847785 0.820914164 1 10.29287753 -6.564250789 2.547864103 0.918651422 0.638636156 0.626577 0.103964638 0.206945921 2.722429521 0.039016517 0.040691448 2.73E-07 6.564250789 -0.280015266 GGGSCSGSAGGGGS(ph)GSLPSQR ddPTM_A459_MK2206_30min_R2 3 GGGSCSGSAGGGGSGSLPSQR 21 0 O15234 O15234 CASC3 Protein CASC3 1 GGGSCSGSAGGGGS(0.971)GS(0.029)LPSQR;GGGSCSGSAGGGGS(0.611)GS(0.389)LPSQR;GGGS(0.004)CS(0.056)GS(0.056)AGGGGS(0.69)GS(0.193)LPS(0.001)QR 240.94 3.95E-31 23072660 9796.54 12113.2 11807.41 12916.14 13796.51 13608 14484.84 12737.86 11973.3 16274.56 TRUE FALSE 10546.57063 11511.6761 12201.06316 11860.85005 13254.7897 14125.86198 12582.96311 14402.74204 13014.71599 15743.52244 0.669899044 0.731200794 0.774989409 0.753379689 0.841920209 0.89724914 0.799247002 0.91483606 0.826671162 1 13.94247074 -2.082866321 0.124329524 1.040084654 1.16E-16 0.797782042 0.041504868 33.48109862 0.326091038 0.263603347 5.942419889 0.008262922 2.082866321 -1.040084654 GGGSCSGSAGGGGSGS(ph)LPSQR ddPTM_A459_MK2206_30min_R1 1 GGGSCSGSAGGGGSGSLPSQR 21 0 O15234 O15234 CASC3 Protein CASC3 1 GGGSCSGSAGGGGS(0.014)GS(0.979)LPS(0.006)QR 124.77 7.10E-05 1984000 189.01 328.92 293.92 220.22 360.94 181.83 325.94 282.38 255.83 185.98 TRUE FALSE 172.933707 307.5072482 273.9695293 237.1813826 346.5629955 192.1250575 304.1971373 279.9111814 282.424444 209.0206065 0.827352431 1.471181494 1.31072976 1.134727272 1.658032676 0.919168022 1.455345205 1.339155915 1.351179909 1 7.707501368 -10.83076027 3.701307457 0.999220705 1.284969365 0.103468819 0.240137315 161549597 278102647.6 1417541.855 0.055565734 1.48E-11 10.83076027 0.28574866 GGGSGGGEES(ph)EGEEVDED ddPTM_A459_MK2206_30min_R1 1 GGGSGGGEESEGEEVDED 18 0 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 GGGSGGGEES(1)EGEEVDED 144.8 0.00028179 2532100 1671.3 1537.2 1584.5 1442.7 1823.3 1625.4 2148.5 1730.2 1475.9 1482.2 TRUE FALSE 1529.147159 1437.128001 1476.948555 1553.817004 1750.6741 1717.428743 2005.177485 1715.073044 1629.325087 1665.826126 0.91795124 0.862711887 0.886616275 0.932760616 1.050934472 1.030977193 1.203713553 1.02956306 0.978088326 1 10.70202211 -6.169146936 2.524029473 1.059576555 0.886694868 0.610948391 0.058587123 0.193788865 2.415228827 0.019559152 0.026408419 6.77E-07 6.169146936 -0.172881686 GGGT(ph)PDANSLAPPGK ddPTM_A459_MK2206_30min_R1 2 GGGTPDANSLAPPGK 15 0 Q9BRQ0;Q5T171 Q9BRQ0 PYGO2 Pygopus homolog 2 1 GGGT(1)PDANSLAPPGK;GGGT(0.771)PDANS(0.229)LAPPGK 196.45 4.79E-05 110310000 18613.3 17959.5 17847.3 15010.5 18333.7 16452.9 17994.5 16603.4 15186.2 13978.6 TRUE FALSE 17030.14109 16790.33329 16635.875 16166.61131 17603.42991 17384.44898 16794.11974 16458.23822 16764.85983 15710.3745 1.084006055 1.068741759 1.058910149 1.02904048 1.120497153 1.106558534 1.068982775 1.047603176 1.067120318 1 13.93942995 -9.018341393 0.910020418 0.999987484 1.075305127 0.442137078 0.024839687 1.768171749 2.248586237 0.026853468 0.008629655 9.59E-10 9.018341393 0.075317644 GGGT(ph)PDANSLAPPGK ddPTM_A459_MK2206_30min_R2 3 GGGTPDANSLAPPGK 15 0 Q9BRQ0;Q5T171 Q9BRQ0 PYGO2 Pygopus homolog 2 1 GGGT(0.83)PDANS(0.17)LAPPGK;GGGT(0.993)PDANS(0.007)LAPPGK;GGGT(0.78)PDANS(0.22)LAPPGK 205.33 8.42E-06 150919000 879060 961260 872900 1081720 963870 906330 1014680 862430 827680 940540 TRUE FALSE 946361.5095 913525.2262 902002.0503 993340.0157 926023.6207 940821.0232 881451.2972 975152.5622 899670.1103 909850.2568 1.040128859 1.004039093 0.991374178 1.091762088 1.017775852 1.034039411 0.968787216 1.071772585 0.988811185 1 19.7952696 GGGTPDANS(ph)LAPPGK ddPTM_A459_MK2206_30min_R2 1 GGGTPDANSLAPPGK 15 0 Q9BRQ0;Q5T171 Q9BRQ0 PYGO2 Pygopus homolog 2 1 GGGT(0.4)PDANS(0.6)LAPPGK 72.848 0.044825 33729000 96231 113600 109600 120820 111030 101390 121080 91482 98756 114130 TRUE FALSE 103598.5193 107958.7892 113254.0093 110948.6195 106670.4043 105248.4675 105182.0506 103439.0115 107345.6184 110405.9474 0.938341835 0.977834906 1.025796272 1.004915243 0.966165381 0.953286213 0.952684642 0.936897096 0.972281121 1 16.75245837 -6.443259168 6.061960461 0.958548143 0.988755568 0.148833177 0.025949581 0.37050203 22.42606594 0.008454942 0.009539909 3.60E-07 6.443259168 0.030207425 GGGTSSGGS(ph)STNSLTGSR ddPTM_A459_MK2206_30min_R1 1 GGGTSSGGSSTNSLTGSR 18 0 Q5T9C2-3;Q5T9C2-2;Q5T9C2 Q5T9C2-3 FAM102A Protein FAM102A 1 GGGT(0.001)S(0.001)S(0.002)GGS(0.681)S(0.157)T(0.157)NS(0.001)LTGS(0.001)R 69.431 0.02563 13303000 0 0 0 0 75.912 0 111.98 76.454 126.56 0 TRUE FALSE 0 0 0 0 72.88826429 0 104.5100185 75.78557074 139.7163649 0 0 GGGTSSGGSSTNS(ph)LTGSRPPK ddPTM_A459_MK2206_30min_R1 2 GGGTSSGGSSTNSLTGSRPPK 21 1 Q5T9C2-3;Q5T9C2-2;Q5T9C2 Q5T9C2-3 FAM102A Protein FAM102A 1 GGGTSSGGSST(0.003)NS(0.995)LT(0.001)GSRPPK;GGGTSSGGSST(0.002)NS(0.971)LT(0.026)GSRPPK 131.75 2.68E-05 10670700 1992.25 2309.4 1846.17 1631.71 1979.82 2056.99 1787.9 1588.56 1347.39 1458.31 TRUE FALSE 1822.798676 2159.05764 1720.857124 1757.384587 1900.959577 2173.454996 1668.632453 1574.671387 1487.456012 1638.976452 1.11215672 1.31732072 1.049958419 1.072245171 1.15984557 1.326105078 1.01809422 0.960765107 0.907551789 1 10.67857941 -7.477620826 8.661000924 0.95809817 1.169233064 0.56246844 0.088227644 0.286092587 52.36394087 0.038512612 0.025664635 3.33E-08 7.477620826 0.211134894 GGGTSSGGSSTNS(ph)LTGSRPPK ddPTM_A459_MK2206_30min_R2 2 GGGTSSGGSSTNSLTGSRPPK 21 1 Q5T9C2-3;Q5T9C2-2;Q5T9C2 Q5T9C2-3 FAM102A Protein FAM102A 1 GGGTS(0.001)S(0.002)GGS(0.001)S(0.004)T(0.004)NS(0.931)LT(0.056)GS(0.001)RPPK;GGGTSSGGSST(0.002)NS(0.694)LT(0.288)GS(0.014)RPPK 76.909 0.0014947 18059400 24300 30595 25158.4 26768 24401.3 24543 23602.8 20516.4 24189.9 22974.7 TRUE FALSE 26160.42668 29075.69679 25997.1685 24580.96877 23443.18236 25477.00106 20503.72401 23197.96392 26293.89378 22225.03742 1.177070085 1.308240622 1.169724397 1.106003482 1.054809579 1.146319828 0.922550708 1.043776147 1.183075343 1 14.43989823 -5.719715071 2.059324505 1.058565122 1.243995428 0.491971978 0.074310329 0.262771441 2.267193012 0.022391241 0.045559258 1.91E-06 5.719715071 0.185430306 GGHMIAVS(ph)PQK ddPTM_A459_MK2206_30min_R2 2 GGHMIAVSPQK 11 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 GGHMIAVS(1)PQK;GGHMIAVS(1)PQK 72.891 0.039213 16289100 178724 195437 182776 193553 203332 166978 226590 160106 158606 195095 TRUE FALSE 192407.2469 185731.8828 188869.6606 177739.1008 195348.164 173332.4648 196838.4608 181032.4039 172401.2632 188729.0661 1.019489212 0.984119122 1.000744954 0.94176856 1.035071958 0.918419554 1.042968446 0.959218459 0.913485489 1 17.5259571 -1.522878745 0.543736864 0.972549055 2.803175202 0.089882082 0.042117978 348.9373717 3.25958998 0.02028097 744.163822 0.03 1.522878745 1.830626147 GGIDNPAIT(ph)SDQELDDK ddPTM_A459_MK2206_30min_R2 1 GGIDNPAITSDQELDDK 17 0 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GGIDNPAIT(0.71)S(0.29)DQELDDK 208.59 3.26E-29 0 64523 64871 57007 55539 58772 46667 74297 55865 41047 67918 TRUE FALSE 69462.93049 61649.60047 58907.58493 51001.28604 56464.31597 48442.94539 64541.71465 63166.74731 44617.19386 65701.84122 1.057244808 0.938323787 0.89658956 0.776253528 0.859402338 0.737314883 0.982342556 0.961415177 0.679085898 1 16.00364618 -4.863351123 1.750372462 0.855769153 1.102876182 0.2691183 0.100333158 1.009431779 3.594279756 0.027332279 0.399250764 1.37E-05 4.863351123 0.24710703 GGIDNPAIT(ph)SDQELDDKK ddPTM_A459_MK2206_30min_R1 2 GGIDNPAITSDQELDDKK 18 1 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GGIDNPAIT(0.5)S(0.5)DQELDDKK;GGIDNPAIT(0.86)S(0.14)DQELDDKK 147.08 0.00028526 113776000 9306.5 11688.7 11386 10209 6492.9 5823.3 7537.1 8659.5 10136.1 8406.2 TRUE FALSE 8514.933305 10927.76351 10613.15004 10995.29895 6234.274044 6153.010214 7034.313811 8583.790904 11189.78387 9447.62352 0.901277796 1.156667969 1.123367164 1.163816374 0.659877485 0.651275974 0.744559073 0.908566148 1.184401966 1 13.20573576 -6.245855058 24.97404591 0.837522151 1.093958799 0.308790832 0.165367072 978.4342778 1567951.277 0.052087676 0.067004079 5.68E-07 6.245855058 0.256436648 GGIDNPAIT(ph)SDQELDDKK ddPTM_A459_MK2206_30min_R2 3 GGIDNPAITSDQELDDKK 18 1 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GGIDNPAIT(0.926)S(0.074)DQELDDKK;GGIDNPAIT(0.839)S(0.161)DQELDDKK;GGIDNPAIT(0.637)S(0.363)DQELDDKK 150.65 0.00017367 184821000 529420 505340 530300 445500 478900 259996 592430 399206 389243 597030 TRUE FALSE 569952.8023 480245.5504 547979.9373 409101.2249 460095.9797 269890.33 514643.2294 451383.5949 423098.6525 577548.96 0.986847595 0.831523531 0.94880257 0.708340337 0.796635457 0.467302945 0.891081562 0.781550355 0.732576252 1 19.13958373 -5.759479319 24.99142381 0.752876288 0.913304483 0.210417586 0.134243222 75.41895545 961586.0077 0.035838611 0.058281994 1.74E-06 5.759479319 0.160428195 GGIDNPAITS(ph)DQELDDK ddPTM_A459_MK2206_30min_R2 1 GGIDNPAITSDQELDDK 17 0 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GGIDNPAIT(0.226)S(0.774)DQELDDK 245.04 2.87E-23 12068000 125970 122770 135390 115170 122050 90217 146260 103190 97465 145870 TRUE FALSE 135614.3601 116673.4203 139903.835 105760.2426 117257.7037 93650.27115 127055.8863 116677.2873 105942.3295 141110.2738 0.961052348 0.82682442 0.991450383 0.749486481 0.830965036 0.663667277 0.900401387 0.826851824 0.750776869 1 17.1064635 -5.766793286 24.99987516 0.807847176 0.916480588 0.211513582 0.094594296 189.843856 886473.9887 0.025032686 0.03838225 1.71E-06 5.766793286 0.108633412 GGIDNPAITS(ph)DQELDDKK ddPTM_A459_MK2206_30min_R1 2 GGIDNPAITSDQELDDKK 18 1 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GGIDNPAIT(0.039)S(0.961)DQELDDKK;GGIDNPAIT(0.222)S(0.778)DQELDDKK 177.29 1.06E-09 99315000 11999.5 14138.3 13857.2 13295.6 8541.4 7405.1 9701.9 11063.9 12343.4 11082.8 TRUE FALSE 10978.87951 13217.8941 12916.61187 14319.62942 8201.177951 7824.370363 9054.703953 10967.16949 13626.5406 12455.82093 0.881425606 1.061182091 1.036994024 1.149633532 0.658421311 0.628169785 0.726945578 0.880485481 1.093989764 1 13.60453249 -6.255723514 24.99445479 0.80998183 1.034705846 0.297798948 0.149019755 589.0556795 2575833.792 0.047354699 0.059456839 5.55E-07 6.255723514 0.224724016 GGIDNPAITS(ph)DQELDDKK ddPTM_A459_MK2206_30min_R2 1 GGIDNPAITSDQELDDKK 18 1 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GGIDNPAIT(0.034)S(0.966)DQELDDKK 158.99 8.60E-06 119260000 257660 241450 260550 194950 246500 148000 287910 242310 205310 317370 TRUE FALSE 277386.6477 229459.9441 269236.607 179021.9614 236821.1714 153632.2437 250107.0712 273980.749 223167.4927 307014.2429 0.903497652 0.747391854 0.87695152 0.583106372 0.771368681 0.500407545 0.814643219 0.892404034 0.72689622 1 18.22794606 -11.45156508 13.11291898 1.028562129 0.754008074 0.254443878 0.124456067 0.066996494 0.000364355 0.077686498 0.029427925 3.54E-12 11.45156508 -0.274554055 GGIPAS(ph)PIDPFQSR ddPTM_A459_MK2206_30min_R1 4 GGIPASPIDPFQSR 14 0 Q96LD4-2;Q96LD4 Q96LD4-2 TRIM47 Tripartite motif-containing protein 47 1 GGIPAS(0.999)PIDPFQS(0.001)R;GGIPAS(1)PIDPFQSR;GGIPAS(1)PIDPFQSR;GGIPAS(1)PIDPFQSR 147.39 0.00047954 127666000 17607.4 17186.1 16808.7 11576.1 13045.5 14208.2 15198.7 11335.3 14403.7 17234.3 TRUE FALSE 16109.79817 16067.28177 15667.77228 12467.69323 12525.87011 15012.65601 14184.82245 11236.19667 15901.01616 19369.4152 0.831713194 0.829518166 0.808892376 0.643679383 0.646682927 0.775070174 0.732330962 0.580099944 0.820934241 1 14.24149278 -8.535479166 23.606789 1.000000005 0.730661545 0.508273637 0.080849331 836.5616869 1567292.106 0.083621667 0.021591022 2.91E-09 8.535479166 -0.26933846 GGIPAS(ph)PIDPFQSR ddPTM_A459_MK2206_30min_R2 4 GGIPASPIDPFQSR 14 0 Q96LD4-2;Q96LD4 Q96LD4-2 TRIM47 Tripartite motif-containing protein 47 1 GGIPAS(1)PIDPFQSR;GGIPAS(1)PIDPFQSR;GGIPAS(0.999)PIDPFQS(0.001)R;GGIPAS(1)PIDPFQSR 203.85 3.06E-05 111039400 450348 430306 385943 418417 351615 323186 363161 248948 267973 321982 TRUE FALSE 484826.9891 408937.6298 398810.147 384230.9927 337808.8284 335485.0697 315477.5245 281486.3584 291280.8072 311475.7537 1.556548089 1.312903572 1.280389058 1.233582351 1.084542936 1.077082456 1.012847776 0.903718363 0.935163664 1 18.24876034 -4.946674082 0.408050817 0.923362049 1.88472475 0.933949583 0.049599693 1.152909734 0.167329787 0.041998546 0.536525788 1.13E-05 4.946674082 0.961362701 GGKDPLSS(ph)PGGPGSR ddPTM_A459_MK2206_30min_R2 1 GGKDPLSSPGGPGSR 15 1 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 GGKDPLS(0.269)S(0.718)PGGPGS(0.013)R 59.579 0.047732 8241600 87858 98137 82232 91566 88928 88991 88200 67134 70430 85731 TRUE FALSE 94584.47603 93263.65928 84973.57384 84084.76489 85436.23989 92377.61486 76619.23405 75908.64431 76555.87409 82933.60449 1.140484326 1.124558131 1.024597621 1.013880506 1.030176373 1.113874351 0.923862342 0.915294165 0.923098358 1 16.33966918 -7.270421474 24.95599835 0.933504887 1.069814844 0.664160954 0.046509362 422.5009447 1173878.227 0.020778692 0.014232748 5.37E-08 7.270421474 0.136309957 GGLHDFRS(ph)PPPGMGLNQNR ddPTM_A459_MK2206_30min_R2 2 GGLHDFRSPPPGMGLNQNR 19 1 P23246;P23246-2 P23246 SFPQ "Splicing factor, proline- and glutamine-rich" 1 GGLHDFRS(1)PPPGMGLNQNR;GGLHDFRS(1)PPPGMGLNQNR 115.74 0.00020222 6141200 21697 23493.5 21851 20392.5 23821 23846 27495 18703.5 23700 16443.7 TRUE FALSE 23358.139 22326.84695 22579.50143 18726.36752 22885.66785 24753.47624 23884.87347 21148.11167 25761.38316 15907.14342 1.468405633 1.403573625 1.419456708 1.177230068 1.438703811 1.556123283 1.501518711 1.329472622 1.619485189 1 13.95738716 -10.54645391 4.438483377 0.99998146 1.428470229 0.560012488 0.115516618 17054456.21 13507920.49 2859.008884 0.028531588 2.84E-11 10.54645391 0.428488769 GGLLTSEEDSGFST(ph)SPK ddPTM_A459_MK2206_30min_R1 1 GGLLTSEEDSGFSTSPK 17 0 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 GGLLTSEEDS(0.063)GFS(0.031)T(0.796)S(0.11)PK 122.12 0.0032771 17214000 1773 1936.5 2023.5 1808.7 1776.5 1885.6 2252.7 1712.2 2114.7 2087.1 TRUE FALSE 1622.19704 1810.433498 1886.150458 1948.006387 1705.738243 1992.361042 2102.426493 1697.230416 2334.530633 2345.665705 0.691572135 0.771820765 0.804100283 0.830470592 0.727187271 0.849379789 0.896302695 0.72356023 0.995252916 1 11.19578171 -14.52287858 0.040110612 2.024666836 0.225975703 0.557202442 0.068538495 638.4021983 1.9054111 77.16021367 23.04341192 3.00E-15 14.52287858 -1.798691133 GGLLTSEEDSGFST(ph)SPK ddPTM_A459_MK2206_30min_R2 3 GGLLTSEEDSGFSTSPK 17 0 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 GGLLTSEEDSGFS(0.001)T(0.5)S(0.5)PK;GGLLTSEEDSGFS(0.002)T(0.975)S(0.023)PK;GGLLTSEEDSGFS(0.002)T(0.795)S(0.203)PK 244.57 9.22E-23 35078500 266204 208361 229177 169560 179681 125845 247290 200381 129120 245938 TRUE FALSE 286584.7829 198014.0957 236817.6468 155706.4056 172625.8211 130634.1197 214820.526 226571.4847 140350.6242 237913.0632 1.204577752 0.83229602 0.995395728 0.654467659 0.725583618 0.549083425 0.902937077 0.952328896 0.589923993 1 17.86007496 GGLLTSEEDSGFST(ph)SPKDNSLPK ddPTM_A459_MK2206_30min_R2 1 GGLLTSEEDSGFSTSPKDNSLPK 23 1 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 GGLLTSEEDS(0.001)GFS(0.099)T(0.438)S(0.438)PKDNS(0.024)LPK 96.012 0.00010302 6410800 29839 51495 46198 42096 57076 33297 58087 41804 41986 46408 TRUE FALSE 32123.49678 48937.83318 47738.21826 38656.62214 54834.90946 34564.14067 50460.10713 47267.92633 45637.86639 44893.71076 0.715545591 1.09008216 1.063360935 0.86106988 1.221438561 0.76991053 1.123990561 1.05288526 1.016575944 1 15.45422573 -4.753517156 24.96371535 1.021581165 0.715545024 0.364591605 0.121425431 300.6920171 947433.6149 0.028054093 0.2986238 1.76E-05 4.753517156 -0.306036141 GGLLTSEEDSGFSTS(ph)PK ddPTM_A459_MK2206_30min_R1 1 GGLLTSEEDSGFSTSPK 17 0 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 GGLLTSEEDSGFS(0.001)T(0.1)S(0.899)PK 143.93 0.0004951 9664600 2700.4 3489.3 3352.8 2532.5 1919.7 1732.4 2181.5 2337.1 3315.2 2977.9 TRUE FALSE 2470.7168 3262.145936 3125.221277 2727.553589 1843.234284 1830.486991 2035.976115 2316.666981 3659.826904 3346.824734 0.738227125 0.974698765 0.933786955 0.81496756 0.550741204 0.546932432 0.608330665 0.692198476 1.093522128 1 11.70857729 -6.006367471 22.08034194 0.713106592 0.888632825 0.080596195 0.180134238 118.8934607 412301.8251 0.052574033 0.074706467 9.85E-07 6.006367471 0.175526233 GGLLTSEEDSGFSTS(ph)PKDNSLPK ddPTM_A459_MK2206_30min_R1 2 GGLLTSEEDSGFSTSPKDNSLPK 23 1 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 GGLLTSEEDSGFS(0.002)T(0.068)S(0.93)PKDNSLPK;GGLLTSEEDS(0.002)GFS(0.02)T(0.085)S(0.893)PKDNSLPK 132.74 3.77E-06 36755000 10039.4 12391.3 13780.8 12848.2 9267.3 7295.4 7463.9 11202.6 8228.3 5058.7 TRUE FALSE 9185.496311 11584.62412 12845.39769 13837.77059 8898.163817 7708.459243 6965.99685 11104.65685 9083.66123 5685.409947 1.615626032 2.037605771 2.259361737 2.433909027 1.565087461 1.355831737 1.225240909 1.953184898 1.59771438 1 12.47304866 -6.396266985 6.434709325 1.472476801 2.093289356 0.515063011 0.303464907 0.21771334 10.48814024 0.098265721 0.111361387 4.02E-07 6.396266985 0.620812555 GGLRPGS(ph)LDAEIDLLSSTLAELNGGR ddPTM_A459_MK2206_30min_R1 2 GGLRPGSLDAEIDLLSSTLAELNGGR 26 1 Q15654 Q15654 TRIP6 Thyroid receptor-interacting protein 6 1 GGLRPGS(1)LDAEIDLLSSTLAELNGGR;GGLRPGS(1)LDAEIDLLSSTLAELNGGR 162.98 1.14E-14 522770000 732.52 705.79 676.84 623.29 944.26 867.59 794.43 591.4 579.75 696.88 TRUE FALSE 670.2153274 659.8429427 630.8979866 671.2959038 906.6481247 916.712196 741.4350242 586.2294522 640.0170872 783.2147556 0.855723571 0.842480224 0.805523622 0.857103239 1.15759837 1.170448066 0.946656098 0.748491328 0.817166789 1 9.613264135 -6.02882164 24.72989344 0.972789966 0.834690716 0.221991235 0.122690042 1098.506304 942552.4593 0.042039233 0.054386116 9.36E-07 6.02882164 -0.13809925 GGLRPGSLDAEIDLLSSTLAELNGGR ddPTM_A459_MK2206_30min_R1 1 GGLRPGSLDAEIDLLSSTLAELNGGR 26 1 Q15654 Q15654 TRIP6 Thyroid receptor-interacting protein 6 0 75.483 0.00054743 8626200 1527.1 1674.6 1670.9 1566.8 1569.2 1747.1 1389.2 1599.1 1687.3 1571.7 FALSE TRUE 1397.212126 1565.583236 1557.483963 1687.475207 1506.695441 1846.019292 1296.529003 1585.119237 1862.700873 1766.414062 0.790987887 0.886305917 0.881720768 0.95531124 0.852968437 1.045066008 0.73398929 0.897365613 1.054509763 1 10.78660785 -1.522878745 0.057198728 1.162995227 0.390235692 0.21247094 0.088385232 684.8837679 2.94693778 8.426044606 44.73358727 0.03 1.522878745 -0.772759535 GGLS(ph)PANDTGAK ddPTM_A459_MK2206_30min_R1 6 GGLSPANDTGAK 12 0 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 GGLS(1)PANDTGAK;GGLS(0.998)PANDT(0.002)GAK;GGLS(1)PANDTGAK;GGLS(1)PANDTGAK;GGLS(1)PANDTGAK;GGLS(0.996)PANDT(0.004)GAK 204.18 3.62E-05 2068271000 44203.8 44759.9 41686.4 35969.6 38381.7 34666.7 39958.4 36511 38163.4 34611.4 TRUE FALSE 40444.03469 41846.02237 38856.84331 38739.98482 36852.87561 36629.4986 37292.84804 36191.78818 42130.622 38899.32153 1.039710542 1.075751985 0.998907996 0.995903869 0.947391218 0.941648778 0.958701761 0.930396386 1.083068299 1 15.24745737 -5.496852589 2.268254081 0.972179109 1.058372804 0.332343935 0.042359502 0.319672937 3.219372997 0.011951886 0.029863316 3.19E-06 5.496852589 0.086193695 GGLS(ph)PANDTGAK ddPTM_A459_MK2206_30min_R2 10 GGLSPANDTGAK 12 0 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 GGLS(0.999)PANDT(0.001)GAK;GGLS(0.993)PANDT(0.007)GAK;GGLS(0.999)PANDT(0.001)GAK;GGLS(1)PANDTGAK;GGLS(0.999)PANDT(0.001)GAK;GGLS(0.997)PANDT(0.003)GAK;GGLS(1)PANDTGAK;GGLS(1)PANDTGAK;GGLS(0.999)PANDT(0.001)GAK;GGLS(1)PANDTGAK 172.85 0.00020773 3057994300 3916215 4314235 3679098 4146134 3933808 3322360 4451464 3698202 3341261 3840422 TRUE FALSE 4216043.431 4099996.363 3801757.291 3807381.589 3779346.932 3448794.738 3866981.43 4181569.699 3631877.842 3715109.345 1.13483697 1.103600455 1.023323121 1.02483702 1.017290901 0.928315809 1.040879573 1.125557638 0.977596486 1 21.82497324 -5.17080727 2.700283257 1.018751407 1.132698139 0.434583274 0.047135897 0.296249487 4.037181871 0.013336203 0.049746728 6.75E-06 5.17080727 0.113946732 GGLS(ph)PANDTGAKK ddPTM_A459_MK2206_30min_R1 4 GGLSPANDTGAKK 13 1 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 GGLS(1)PANDTGAKK;GGLS(1)PANDTGAKK;GGLS(1)PANDTGAKK;GGLS(1)PANDTGAKK 180.85 0.00020361 33195200 8806.8 8307.76 7552.32 8191.7 8009.3 6568.53 6389.79 7983.25 4912.5 3627.5 TRUE FALSE 8057.735414 7766.923314 7039.68956 8822.626153 7690.272621 6940.434492 5963.538768 7913.453287 5423.171955 4076.902086 1.976435843 1.905104207 1.726725198 2.164051519 1.886302996 1.702379489 1.462762323 1.941045706 1.330218838 1 11.99325759 -8.71642723 0.401558179 0.926321872 1.96518697 0.71462194 0.177938293 0.926181497 0.353997315 0.316626233 0.140745465 1.92E-09 8.71642723 1.038865098 GGLS(ph)PANDTGAKK ddPTM_A459_MK2206_30min_R2 1 GGLSPANDTGAKK 13 1 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 GGLS(1)PANDTGAKK 118.52 0.0061185 6192400 11966 22056 17949 18122 23312 16601 21545 13680 19619 19881 TRUE FALSE 12882.12616 20960.73111 18547.4107 16641.37463 22396.65375 17232.76269 18716.11562 15468.02297 21325.42516 19232.2846 0.669817779 1.089872137 0.964389363 0.865283297 1.164534231 0.896033053 0.973161328 0.804273818 1.108834733 1 14.23124253 -4.748062209 24.99928553 0.97708815 0.669817032 0.436339454 0.107168156 637.913333 1192064.515 0.025404005 0.482492719 1.79E-05 4.748062209 -0.307271118 GGLTS(ph)PIFCSTKPK ddPTM_A459_MK2206_30min_R1 2 GGLTSPIFCSTKPK 14 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 GGLT(0.08)S(0.92)PIFCSTKPK;GGLT(0.086)S(0.914)PIFCSTKPK 80.719 0.018365 27215000 7806.7 7295.4 7441.6 6079.3 6906.3 6021.6 6012.1 6388 5590.6 5266.7 TRUE FALSE 7142.69917 6820.468134 6936.484925 6547.528739 6631.207447 6362.537788 5611.043779 6332.150389 6171.762876 5919.178558 1.206704461 1.152265989 1.17186614 1.106154963 1.120291842 1.074902155 0.947942983 1.069768436 1.042672191 1 12.53118126 -6.417826812 0.910098194 1.0181636 1.18210768 0.760734199 0.036777129 0.294608494 0.530255419 0.019799675 0.026687073 3.82E-07 6.417826812 0.16394408 GGLVS(ph)DAYGEDDFSR ddPTM_A459_MK2206_30min_R1 2 GGLVSDAYGEDDFSR 15 0 J3KS14;F5H478;J3KRU5;X6R3T8;J3QLH3;J3QQJ0;Q9UHR5-2;Q9UHR5 J3KS14 SAP30BP SAP30-binding protein 1 GGLVS(1)DAYGEDDFSR;GGLVS(1)DAYGEDDFSR 219.95 2.27E-09 25981000 5761.7 5462.7 5229.8 4434.6 5399.5 5438.7 6001 5463.3 5194.1 5058 TRUE FALSE 5271.637159 5107.077237 4874.815747 4776.15366 5184.426481 5746.634494 5600.684239 5415.534944 5734.045282 5684.623226 0.927350318 0.898402064 0.857544212 0.840188254 0.912008813 1.010908598 0.985234028 0.952663832 1.00869399 1 12.47284902 -6.619992992 4.720603285 0.987703433 0.879934427 0.795766981 0.026729818 0.100763549 3.846733391 0.009580036 0.009572947 2.40E-07 6.619992992 -0.107769005 GGMGS(ph)GGLATGIAGGLAGMGGIQNEK ddPTM_A459_MK2206_30min_R1 2 GGMGSGGLATGIAGGLAGMGGIQNEK 26 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 GGMGS(1)GGLATGIAGGLAGMGGIQNEK;GGMGS(1)GGLATGIAGGLAGMGGIQNEK 109.33 1.57E-08 26239000 6467.2 6418.7 6265.6 4799.6 6430.6 6005.8 7035.8 5631.4 6713.4 6512.8 TRUE FALSE 5917.130679 6000.841463 5840.308529 5169.266024 6174.455585 6345.843206 6566.45462 5582.165264 7411.281954 7319.654833 0.808389304 0.819825743 0.79789398 0.706217184 0.843544638 0.866959351 0.897098944 0.762626844 1.012517957 1 12.8375599 -8.225627301 0.621620688 1.01026278 0.793560882 0.559450598 0.061230235 0.577256904 0.519274004 0.061095906 0.028347206 5.95E-09 8.225627301 -0.216701898 GGMGS(ph)GGLATGIAGGLAGMGGIQNEK ddPTM_A459_MK2206_30min_R2 2 GGMGSGGLATGIAGGLAGMGGIQNEK 26 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 GGMGS(1)GGLATGIAGGLAGMGGIQNEK;GGMGS(0.998)GGLAT(0.002)GIAGGLAGMGGIQNEK 105.74 2.29E-08 12832300 74644 77838 80194 92812 72208 74026 93771 69222 64314 84546 TRUE FALSE 80358.80203 73972.67811 82867.62793 85228.96271 69372.7511 76843.1113 81458.75506 78269.55307 69907.91547 81787.27094 0.982534337 0.904452212 1.013209354 1.04208102 0.848209633 0.939548544 0.995983288 0.956989421 0.854753003 1 16.3195887 -6.240852979 24.98847114 0.93394863 0.981749439 0.168111638 0.057446977 1771.269055 2150027.29 0.017422017 0.022461472 5.74E-07 6.240852979 0.047800809 GGMGSGGLAT(ph)GIAGGLAGMGGIQNEK ddPTM_A459_MK2206_30min_R1 1 GGMGSGGLATGIAGGLAGMGGIQNEK 26 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 GGMGS(0.143)GGLAT(0.857)GIAGGLAGMGGIQNEK 80.93 0.00021919 3963500 975.32 1273.1 1217.4 1037.7 1180.7 1360.2 1247.5 1218.5 1223.2 1248.2 TRUE FALSE 892.3639124 1190.220959 1134.76628 1117.623834 1133.670219 1437.213349 1164.281551 1207.846783 1350.356017 1402.836439 0.63611401 0.848438867 0.808908471 0.796688625 0.808127154 1.024505287 0.829948181 0.861003285 0.962589778 1 10.4541311 -2.324526611 0.195841914 0.98828236 8.66E-12 0.581457932 0.070158185 31.74623443 0.497196914 0.140410196 8.96815226 0.004736673 2.324526611 -0.98828236 GGNFGFGDSR ddPTM_A459_MK2206_30min_R1 1 GGNFGFGDSR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 137.46 0.024155 20196000 5865.6 6135.1 6185.3 5618.2 6691.4 6008.9 6436.6 5850 5499.3 5063.5 FALSE TRUE 5366.699919 5735.703875 5765.459069 6050.914737 6424.867369 6349.118725 6007.226158 5798.854067 6070.971914 5690.804607 0.943047651 1.007889792 1.013118437 1.0632793 1.128991032 1.115680323 1.055602252 1.018986675 1.066803788 1 12.47441693 -5.171625087 1.387337869 1.06848473 0.94153638 0.485156246 0.03818949 0.604190379 1.676022057 0.012476664 0.087866237 6.74E-06 5.171625087 -0.126948351 GGNFGFGDSR ddPTM_A459_MK2206_30min_R2 1 GGNFGFGDSR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 142.36 0.016728 55776000 58325 78463 67905 88968 83812 93874 86668 65591 79901 65062 FALSE TRUE 62790.40684 74566.64152 70168.91881 81699.02981 80521.11976 97446.44085 75288.38749 74163.96891 86850.64455 62939.03227 0.997638581 1.184744011 1.11487127 1.29806619 1.279351094 1.548267225 1.196211393 1.178346191 1.379917063 1 15.94166738 -5.756790619 21.31006208 1.285110596 1.10765015 0.227973796 0.140402497 25.78615215 118189.185 0.037766975 0.062431358 1.75E-06 5.756790619 -0.177460446 GGNIGDGGGAADR ddPTM_A459_MK2206_30min_R2 1 GGNIGDGGGAADR 13 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 122.39 0.036788 15054000 57281 60109 51103 71356 59155 58019 62363 56771 66030 52320 FALSE TRUE 61666.4774 57124.07447 52806.74851 65525.98654 56832.27747 60226.9537 54174.66319 64191.16462 71773.17005 50612.80268 1.218396811 1.12864871 1.043347646 1.294652402 1.12288343 1.189954923 1.070374694 1.268279195 1.418083296 1 15.62721475 -7.790976878 24.995752 1.257386054 1.153240863 0.065754626 0.117579749 420.0836225 355485.0932 0.060624135 0.029129933 1.62E-08 7.790976878 -0.104145191 GGNLPPVS(ph)PNDSGAK ddPTM_A459_MK2206_30min_R1 4 GGNLPPVSPNDSGAK 15 0 Q9UK61-3;Q9UK61;Q9UK61-2;A0A087X0F1;Q9UK61-4 Q9UK61-3 FAM208A Protein FAM208A 1 GGNLPPVS(1)PNDSGAK;GGNLPPVS(0.999)PNDS(0.001)GAK;GGNLPPVS(0.996)PNDS(0.004)GAK;GGNLPPVS(1)PNDSGAK 183.31 2.09E-05 43975700 22250.7 24595.8 23845.1 19503.7 20344.1 17346.5 20882.8 20589 20721.1 19314.5 TRUE FALSE 20358.16112 22994.60895 22226.56105 21005.87835 19533.75142 18328.64384 19489.74651 20408.99254 22875.1325 21707.32608 0.937847483 1.059301771 1.023919803 0.96768613 0.899869074 0.844352905 0.897841883 0.940189154 1.053797801 1 14.4058944 -4.447895359 21.75706864 0.959761279 1.86E-05 0.008816765 0.06758158 1927.391574 941732.1157 0.018230052 61931.90639 3.57E-05 4.447895359 -0.959742722 GGNLPPVS(ph)PNDSGAK ddPTM_A459_MK2206_30min_R2 5 GGNLPPVSPNDSGAK 15 0 Q9UK61-3;Q9UK61;Q9UK61-2;A0A087X0F1;Q9UK61-4 Q9UK61-3 FAM208A Protein FAM208A 1 GGNLPPVS(1)PNDSGAK;GGNLPPVS(1)PNDSGAK;GGNLPPVS(0.999)PNDS(0.001)GAK;GGNLPPVS(1)PNDSGAK;GGNLPPVS(1)PNDSGAK 170.35 5.32E-05 82627000 200789 220462 214164 219280 212769 188212 231374 187667 185058 219324 TRUE FALSE 216161.5602 209514.1777 221304.1209 201364.1226 204414.62 195374.5395 200994.3159 212195.7213 201154.0103 212167.4758 1.018825149 0.987494322 1.043063363 0.949081011 0.963458792 0.920850563 0.947338017 1.000133128 0.948090698 1 17.69484399 -5.77443628 24.99946789 0.959109874 1.013564285 0.483253103 0.026030163 187.4979641 360651.1918 0.007304456 0.010914408 1.68E-06 5.77443628 0.054454411 GGPAS(ph)PGGLQGLETR ddPTM_A459_MK2206_30min_R1 4 GGPASPGGLQGLETR 15 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 GGPAS(0.999)PGGLQGLET(0.001)R;GGPAS(1)PGGLQGLETR;GGPAS(1)PGGLQGLETR;GGPAS(1)PGGLQGLETR 200.81 1.78E-05 312922000 11713.8 10378.6 10062.6 8915.5 11066.7 9335.5 10850.3 8976.9 8339 7577.5 TRUE FALSE 10717.4798 9702.951254 9379.578748 9602.173355 10625.8899 9864.067942 10126.49628 8898.41591 9205.868891 8516.257907 1.258472901 1.139344458 1.101373262 1.127510869 1.24771819 1.158263177 1.18907816 1.044873935 1.080975822 1 13.05600393 -7.765969786 24.98127733 1.047193614 1.170749736 0.593553303 0.050153952 88.53544367 488182.9993 0.027037441 0.013684323 1.71E-08 7.765969786 0.123556121 GGPAS(ph)PGGLQGLETR ddPTM_A459_MK2206_30min_R2 4 GGPASPGGLQGLETR 15 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 GGPAS(0.998)PGGLQGLET(0.002)R;GGPAS(1)PGGLQGLETR;GGPAS(1)PGGLQGLETR;GGPAS(1)PGGLQGLETR 189.8 2.00E-05 401755000 149578 175607 151781 179217 181259 187209 191223 153584 169251 165004 TRUE FALSE 161029.8067 166886.6117 156841.3028 164574.3978 174141.8609 194333.3697 166115.1904 173657.9561 183972.146 159619.933 1.008832692 1.045524883 0.98259221 1.031039136 1.090978161 1.217475575 1.040692019 1.087946555 1.152563734 1 17.2842813 -6.253360513 4.137186769 1.106477531 1.015159475 0.325520157 0.057139239 0.238391583 9.956647887 0.017340917 0.021459469 5.58E-07 6.253360513 -0.091318056 GGPASVPS(ph)SSPGTSVK ddPTM_A459_MK2206_30min_R1 3 GGPASVPSSSPGTSVK 16 0 O43237-2;O43237;J3KRZ2;J3KRI4 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 GGPASVPS(0.471)S(0.253)S(0.253)PGT(0.023)SVK;GGPASVPS(0.325)S(0.325)S(0.325)PGT(0.022)S(0.002)VK;GGPASVPS(0.615)S(0.33)S(0.055)PGT(0.001)SVK 275.42 3.50E-51 75488000 17645.1 14997.3 14149.77 11927.41 13613.1 11405.68 13898.4 13557.78 12488.11 12533.8 TRUE FALSE 16144.29159 14020.97304 13189.32304 12846.06118 13070.8614 12051.45975 12971.2631 13439.24576 13786.29372 14086.58177 1.146075879 0.995342467 0.936304013 0.911936011 0.927894475 0.855527618 0.920824037 0.954045913 0.978682689 1 13.78203395 -4.72971079 1.922026938 0.929011997 1.232828908 0.742257531 0.037354784 0.461448051 1.635032445 0.010413267 0.264214141 1.86E-05 4.72971079 0.303816912 GGPASVPS(ph)SSPGTSVK ddPTM_A459_MK2206_30min_R2 3 GGPASVPSSSPGTSVK 16 0 O43237-2;O43237;J3KRZ2;J3KRI4 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 GGPASVPS(0.5)S(0.306)S(0.189)PGT(0.005)SVK;GGPASVPS(0.655)S(0.168)S(0.168)PGT(0.007)S(0.001)VK;GGPASVPS(0.464)S(0.287)S(0.179)PGT(0.066)S(0.004)VK 218.68 1.08E-10 72056400 217315 212354 185995 207415 204791 183001 232975 165576 163777 212491 TRUE FALSE 233952.8035 201808.8092 192195.9805 190468.531 196749.8763 189965.2313 202385.1026 187217.3517 178022.0274 205557.4361 1.138138362 0.981763603 0.934998919 0.926595187 0.957152804 0.924146725 0.984567168 0.910778784 0.866045183 1 17.64918204 -4.732919432 2.399531092 0.936357915 1.201740034 0.739052505 0.035625311 0.329022555 2.079942128 0.009161646 0.192991673 1.85E-05 4.732919432 0.265382118 GGPASVPSS(ph)SPGTSVK ddPTM_A459_MK2206_30min_R1 1 GGPASVPSSSPGTSVK 16 0 O43237-2;O43237;J3KRZ2;J3KRI4 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 GGPASVPS(0.117)S(0.768)S(0.114)PGT(0.002)SVK 244.23 6.32E-22 25596000 5018.4 4062.7 3828.1 3817.9 3524 3465.2 4278.6 3699 3672.3 3342.4 TRUE FALSE 4591.558727 3798.217492 3568.259238 4111.95532 3383.631618 3661.396629 3993.182401 3666.660033 4054.048726 3756.481746 1.222302952 1.011110328 0.949893938 1.094629389 0.900744858 0.97468772 1.063011262 0.976088873 1.079214276 1 11.87516638 -4.762426527 6.304224469 1.002900241 1.2290588 0.564666795 0.05711561 0.087763107 15.21723828 0.013660613 0.0856019 1.73E-05 4.762426527 0.226158559 GGPASVPSS(ph)SPGTSVK ddPTM_A459_MK2206_30min_R2 2 GGPASVPSSSPGTSVK 16 0 O43237-2;O43237;J3KRZ2;J3KRI4 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 GGPASVPS(0.051)S(0.754)S(0.129)PGT(0.067)SVK;GGPASVPS(0.257)S(0.512)S(0.179)PGT(0.052)SVK 238.64 2.34E-21 70655000 263921 264116 246067 250003 258620 221567 283919 201996 191817 259991 TRUE FALSE 284126.9947 251000.3835 254270.751 229576.9552 248465.2793 229998.8874 246640.0943 228397.5708 208500.8959 251507.515 1.129695845 0.997983633 1.010986694 0.912803561 0.987903997 0.914481174 0.980647017 0.908114299 0.829004636 1 17.94024198 -1.522878745 0.563876999 0.925386198 10.59358152 0.584507633 0.049630031 99.54884156 0.871922656 0.023323416 1171.769965 0.03 1.522878745 9.668195322 GGPASVPSSS(ph)PGTSVK ddPTM_A459_MK2206_30min_R2 1 GGPASVPSSSPGTSVK 16 0 O43237-2;O43237;J3KRZ2;J3KRI4 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 GGPASVPS(0.034)S(0.214)S(0.734)PGT(0.018)SVK 235.93 1.14E-16 9124900 77973 72480 71891 82087 79345 70469 86319 59983 65744 81371 TRUE FALSE 83942.67283 68880.7486 74287.81006 75380.22952 76229.51662 73150.74717 74985.21161 67822.98405 71462.29428 78715.87093 1.066400865 0.875055409 0.943746276 0.957624284 0.968413558 0.929301122 0.952606008 0.861617654 0.907851154 1 16.26436693 -7.623713693 23.31969791 0.912259385 0.952073981 0.056726252 0.054928293 17.86993297 4102.346245 0.024414817 0.014095815 2.38E-08 7.623713693 0.039814596 GGPEGVAAQAVASAAS(ph)AGPADAEMEEIFDDASPGK ddPTM_A459_MK2206_30min_R2 1 GGPEGVAAQAVASAASAGPADAEMEEIFDDASPGK 35 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 GGPEGVAAQAVAS(0.192)AAS(0.722)AGPADAEMEEIFDDAS(0.086)PGK 62.833 0.0015301 0 4132.2 5322.3 4406.6 3481 3335.3 3302.4 4049.5 2812.3 3266.3 4594.9 TRUE FALSE 4448.564409 5058.002321 4553.513845 3196.591165 3204.339363 3428.075146 3517.795786 3179.877266 3550.39687 4444.968789 1.000808919 1.137916274 1.024419756 0.719148169 0.720891308 0.77122592 0.791410683 0.715387985 0.798745062 1 12.11795757 -5.691933022 5.529454413 0.773076107 1.06992368 0.673226101 0.084691679 0.099954028 5.560754892 0.021604234 0.037615269 2.03E-06 5.691933022 0.296847573 GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(ph)PGK ddPTM_A459_MK2206_30min_R1 4 GGPEGVAAQAVASAASAGPADAEMEEIFDDASPGK 35 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK;GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK;GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK;GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK 192.46 1.06E-49 75370000 8570.56 9552.57 10135.8 7273.64 6294.13 6302.38 8965.08 6873.09 11133.28 11894.66 TRUE FALSE 7841.588866 8930.695957 9447.810136 7833.857013 6043.421474 6659.215309 8367.035871 6812.999299 12290.6243 13368.26028 0.586582599 0.66805222 0.706734454 0.586004226 0.452072397 0.49813627 0.625888163 0.509639935 0.919388465 1 13.70652411 -8.34812089 4.684154061 0.989260376 0.581384653 0.806741042 0.074731075 0.102020874 3.703211584 0.079369804 0.020937637 4.49E-09 8.34812089 -0.407875724 GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(ph)PGK ddPTM_A459_MK2206_30min_R2 6 GGPEGVAAQAVASAASAGPADAEMEEIFDDASPGK 35 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 GGPEGVAAQAVAS(0.01)AAS(0.131)AGPADAEMEEIFDDAS(0.859)PGK;GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK;GGPEGVAAQAVAS(0.008)AAS(0.014)AGPADAEMEEIFDDAS(0.977)PGK;GGPEGVAAQAVASAAS(0.001)AGPADAEMEEIFDDAS(0.999)PGK;GGPEGVAAQAVASAAS(0.002)AGPADAEMEEIFDDAS(0.998)PGK;GGPEGVAAQAVAS(0.003)AAS(0.01)AGPADAEMEEIFDDAS(0.987)PGK 110.57 3.09E-12 20173200 51808.3 43932 43838.4 42657.5 37738.2 39370.4 53115.5 38421.7 26483.1 50687.2 TRUE FALSE 55774.78328 41750.40076 45299.95038 39172.2458 36256.40865 40868.66816 46141.37105 43443.54811 28786.55217 49033.28082 1.137488301 0.851470676 0.923861296 0.798890981 0.73942449 0.833488347 0.941021492 0.88600125 0.58708191 1 15.58147368 GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(ph)PGKQK ddPTM_A459_MK2206_30min_R1 1 GGPEGVAAQAVASAASAGPADAEMEEIFDDASPGKQK 37 1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 GGPEGVAAQAVAS(0.201)AAS(0.201)AGPADAEMEEIFDDAS(0.598)PGKQK 65.609 1.72E-05 2540900 656.9 1005.9 930.84 769.22 731.83 613.45 666.66 866.38 512.2 402.02 TRUE FALSE 601.0272055 940.4157272 867.6571743 828.4654577 702.6796614 648.1830089 622.1883278 858.805331 565.4450229 451.8252727 1.330220423 2.081370353 1.920337853 1.833596985 1.555202207 1.434587767 1.37705517 1.900746556 1.251468338 1 8.819621159 -6.384947393 3.277877878 1.45059112 1.822383419 0.300719768 0.277689857 0.340464263 6.854155861 0.088207306 0.101308462 4.12E-07 6.384947393 0.371792299 GGPGAAPGGASPAS(ph)SSSAASSPSSGR ddPTM_A459_MK2206_30min_R2 1 GGPGAAPGGASPASSSSAASSPSSGR 26 0 Q9BXK1 Q9BXK1 KLF16 Krueppel-like factor 16 1 GGPGAAPGGAS(0.045)PAS(0.512)S(0.31)S(0.056)S(0.027)AAS(0.045)S(0.005)PSSGR 293.67 5.58E-184 0 6936.7 7132.9 7188.2 9863.8 8475.4 8627.3 9746.7 6627.2 8165.3 6575.3 TRUE FALSE 7467.779085 6778.690558 7427.851 9057.895987 8142.613211 8955.617947 8466.946582 7493.397795 8875.503035 6360.748499 1.17404093 1.065706427 1.167763668 1.42402989 1.280134439 1.40795033 1.331124251 1.178068555 1.395355128 1 12.63498083 -5.572331992 8.923064239 1.301792095 1.119034829 0.247610814 0.121884245 0.334803877 56.20929434 0.03088531 0.05367949 2.68E-06 5.572331992 -0.182757265 GGPGAAPGGASPASSSSAAS(ph)SPSSGR ddPTM_A459_MK2206_30min_R1 2 GGPGAAPGGASPASSSSAASSPSSGR 26 0 Q9BXK1 Q9BXK1 KLF16 Krueppel-like factor 16 1 GGPGAAPGGASPASSSS(0.001)AAS(0.913)S(0.085)PS(0.001)SGR;GGPGAAPGGASPASSS(0.001)SAAS(0.496)S(0.496)PS(0.004)S(0.004)GR 362.08 6.28E-241 20545200 2246.43 2326.99 2269.07 2044.81 2185.97 2440.71 2989.7 2342.02 2454.88 2099.76 TRUE FALSE 2055.359332 2175.502528 2115.05185 2202.301621 2098.898186 2578.900891 2790.262568 2321.543966 2710.073561 2359.894121 0.870954046 0.921864464 0.89624862 0.933220521 0.88940354 1.092803642 1.182367693 0.983749205 1.148387776 1 11.20450642 -6.763225709 24.99733434 1.086752642 0.904800383 0.703914474 0.05802425 25.2044772 352698.8874 0.018913466 0.017545862 1.72E-07 6.763225709 -0.181952259 GGPGAAPGGASPASSSSAAS(ph)SPSSGR ddPTM_A459_MK2206_30min_R2 1 GGPGAAPGGASPASSSSAASSPSSGR 26 0 Q9BXK1 Q9BXK1 KLF16 Krueppel-like factor 16 1 GGPGAAPGGAS(0.001)PAS(0.026)S(0.008)S(0.003)S(0.012)AAS(0.624)S(0.325)PS(0.001)SGR 142.27 1.36E-09 1268200 2793.9 3252.5 3367.2 3710.9 2942 4136.7 3735.6 3768 2774 4418.8 TRUE FALSE 3007.803132 3090.98558 3479.460767 3407.707599 2826.482298 4294.125017 3245.111233 4260.490537 3015.277506 4274.614918 0.703643063 0.723102698 0.813982273 0.797196394 0.661225011 1.004564177 0.75915873 0.996695754 0.705391612 1 12.06157874 -6.75245614 24.99998236 0.884580339 0.746207216 0.356883677 0.102414738 231.7204016 644867.2979 0.031793321 0.031352153 1.77E-07 6.75245614 -0.138373123 GGPGAAPGGASPASSSSAASS(ph)PSSGR ddPTM_A459_MK2206_30min_R1 2 GGPGAAPGGASPASSSSAASSPSSGR 26 0 Q9BXK1 Q9BXK1 KLF16 Krueppel-like factor 16 1 GGPGAAPGGASPASSSSAAS(0.051)S(0.948)PSSGR;GGPGAAPGGASPASSS(0.001)S(0.001)AAS(0.269)S(0.533)PS(0.152)S(0.044)GR 280.93 1.49E-87 17716500 3472.3 3019.38 3034.01 2691.4 3113.25 3719.96 3980.84 3130.57 3431.09 3550.52 TRUE FALSE 3176.962651 2822.817813 2828.069854 2898.692094 2989.24266 3930.58092 3715.285427 3103.199757 3787.764084 3990.385223 0.796154375 0.707404838 0.708721012 0.726419113 0.7491113 0.9850129 0.931059339 0.777669218 0.949222662 1 11.96231231 -6.694717704 7.520539167 0.91459488 0.73256597 0.703923585 0.061598558 0.141551865 13.56559541 0.020679952 0.020604144 2.02E-07 6.694717704 -0.182028911 GGPGAAPGGASPASSSSAASS(ph)PSSGR ddPTM_A459_MK2206_30min_R2 2 GGPGAAPGGASPASSSSAASSPSSGR 26 0 Q9BXK1 Q9BXK1 KLF16 Krueppel-like factor 16 1 GGPGAAPGGASPASSSSAAS(0.041)S(0.947)PS(0.01)S(0.001)GR;GGPGAAPGGASPASSSSAAS(0.232)S(0.765)PS(0.003)SGR 327.32 7.50E-154 37827000 23928.5 27201 23757.3 29144.7 21085.6 30398.5 32420 27652 29767 30905 TRUE FALSE 25760.48436 25850.23789 24549.35652 26763.48478 20257.6734 31555.33622 28163.21506 31266.21134 32356.07985 29896.57238 0.861653437 0.864655572 0.821142846 0.895202448 0.677591837 1.055483412 0.942021537 1.045812575 1.082267206 1 14.86769247 -6.786728066 24.99995045 1.022786839 0.830096576 0.706272325 0.064765972 129.5066048 128027.0089 0.022359712 0.019726711 1.63E-07 6.786728066 -0.192690263 GGPGS(ph)AVSPYPTFNPSSDVAALHK ddPTM_A459_MK2206_30min_R1 1 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 GGPGS(0.432)AVS(0.375)PY(0.072)PT(0.115)FNPS(0.004)S(0.002)DVAALHK 91.691 2.71E-05 35205000 1536.7 1585.5 1515.9 1430.5 1414.9 1432.6 1508.3 1738.9 1419.3 1232.7 TRUE FALSE 1405.995595 1482.283662 1413.004932 1540.677358 1358.541537 1513.712574 1407.684059 1723.696981 1566.841314 1385.416182 1.014854318 1.069919408 1.019913691 1.112068256 0.980601753 1.092604947 1.016073059 1.244172692 1.130953524 1 10.43610372 -7.725355252 24.9999799 1.140672816 1.045892839 0.227629063 0.066726693 193.3608685 133965.139 0.029063233 0.01677893 1.88E-08 7.725355252 -0.094779977 GGPGS(ph)AVSPYPTFNPSSDVAALHK ddPTM_A459_MK2206_30min_R2 4 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 GGPGS(0.998)AVS(0.002)PYPTFNPSSDVAALHK;GGPGS(0.688)AVS(0.312)PYPTFNPSSDVAALHK;GGPGS(0.941)AVS(0.059)PYPTFNPSSDVAALHK;GGPGS(0.768)AVS(0.228)PY(0.004)PTFNPSSDVAALHK 180.7 1.66E-20 37019300 56502.4 67875 60405.7 63415.4 63849 64181 90666 63924 69167 56427 TRUE FALSE 60828.26719 64504.4262 62419.59589 58234.15896 61341.96744 66623.45293 78761.44529 72279.08628 75183.02063 54585.79161 1.114360814 1.181707259 1.143513615 1.066837308 1.123771693 1.220527375 1.442892793 1.324137365 1.37733682 1 15.73623785 -6.974067981 4.598070534 1.316006189 1.128678474 0.295719595 0.112803858 0.202792544 10.4933986 0.039412925 0.033439161 1.06E-07 6.974067981 -0.187327715 GGPGSAVS(ph)PYPTFNPSSDVAALHK ddPTM_A459_MK2206_30min_R1 2 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 GGPGS(0.003)AVS(0.996)PY(0.001)PTFNPSSDVAALHK;GGPGS(0.003)AVS(0.997)PYPTFNPSSDVAALHK 153.23 2.82E-10 464910000 11920.9 11949.8 11534.8 8864.6 12470.6 10673 11683.7 11351.2 10939.4 9418.9 TRUE FALSE 10906.96486 11171.86585 10751.84991 9547.353028 11973.8696 11277.29604 10904.30169 11251.95766 12076.58978 10585.78444 1.030340729 1.055364948 1.015687593 0.901903216 1.131127283 1.065324549 1.030089149 1.062930926 1.14083088 1 13.36984056 -6.290125099 24.99486144 1.072462639 1.005781509 0.290195086 0.05408736 1013.316827 882934.8368 0.017027626 0.019310526 5.13E-07 6.290125099 -0.066681131 GGPGSAVS(ph)PYPTFNPSSDVAALHK ddPTM_A459_MK2206_30min_R2 4 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 GGPGS(0.003)AVS(0.76)PY(0.201)PT(0.036)FNPSSDVAALHK;GGPGS(0.001)AVS(0.999)PYPTFNPSSDVAALHK;GGPGS(0.004)AVS(0.996)PYPTFNPSSDVAALHK;GGPGS(0.005)AVS(0.95)PY(0.04)PT(0.004)FNPSSDVAALHK 150.34 7.06E-10 385273000 473652 580820 532535 599270 549303 521730 611680 449653 520808 506810 TRUE FALSE 509915.1613 551977.3234 550289.4511 550307.724 527734.6042 541584.8007 531365.6812 508424.191 566106.9384 490272.8312 1.04006408 1.125857458 1.122414737 1.122452008 1.076410053 1.104660031 1.08381629 1.037022977 1.15467736 1 18.90322529 -7.520111267 24.72096208 1.069594031 1.100466073 0.108260823 0.043586587 243.091394 2171542.768 0.019185197 0.011326695 3.02E-08 7.520111267 0.030872042 GGPGSAVSPY(ph)PTFNPSSDVAALHK ddPTM_A459_MK2206_30min_R1 2 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 GGPGSAVS(0.109)PY(0.774)PT(0.055)FNPS(0.017)S(0.044)DVAALHK;GGPGS(0.012)AVS(0.165)PY(0.752)PT(0.069)FNPS(0.001)SDVAALHK 106.89 3.60E-06 38337000 3659.5 4137.1 4124.4 3792.5 4117.3 3841.6 4830.3 3968.5 3404.4 3706.5 TRUE FALSE 3348.240308 3867.774038 3844.447219 4084.599007 3953.299222 4059.108072 4508.0795 3933.803823 3758.299563 4165.689203 0.803766231 0.928483583 0.922883833 0.980533786 0.949014444 0.974414527 1.082192953 0.94433445 0.902203544 1 12.02433949 -3.692582357 0.824506538 0.978137062 4.09E-11 0.557623403 0.045300399 9.712024648 1.302545345 0.01672796 13.15592424 0.000202963 3.692582357 -0.978137062 GGPGSAVSPYPT(ph)FNPSSDVAALHK ddPTM_A459_MK2206_30min_R1 1 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 GGPGSAVS(0.002)PY(0.001)PT(0.997)FNPSSDVAALHK 107.24 7.24E-07 21402000 2466.5 2790.5 2421.3 2315.3 2634.4 2759.5 2833.6 2213.8 2017.6 2049.1 TRUE FALSE 2256.711223 2608.837943 2256.948902 2493.624807 2529.46627 2915.740505 2644.575714 2194.44498 2227.33674 2302.957978 0.979918542 1.132820472 0.980021748 1.082792144 1.098355373 1.26608498 1.148338676 0.952881034 0.967163431 1 11.16927237 -7.769612187 24.99264003 0.970016633 1.100964252 0.347879128 0.078320484 219.0090221 669722.4771 0.044926333 0.022164553 1.70E-08 7.769612187 0.13094762 GGPGSAVSPYPT(ph)FNPSSDVAALHK ddPTM_A459_MK2206_30min_R2 2 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 GGPGSAVS(0.003)PY(0.004)PT(0.99)FNPS(0.002)S(0.001)DVAALHK;GGPGSAVS(0.001)PY(0.036)PT(0.953)FNPS(0.008)S(0.001)DVAALHK 113.05 3.16E-07 13652800 36893 63886 43330 55376 42722 43239 50294 43559 39465 43645 TRUE FALSE 39717.55645 60713.51414 44774.60057 50851.60366 41044.51962 44884.49044 43690.33739 49252.31086 42897.59436 42220.86722 0.940709158 1.437997799 1.060485099 1.204418739 0.972138242 1.063087838 1.034804358 1.166539536 1.016028262 1 15.36566859 -6.2467683 24.57228541 1.051111319 1.173522527 0.168427283 0.127159051 1111.352398 1861379.116 0.035382292 0.045467878 5.67E-07 6.2467683 0.122411207 GGPGSAVSPYPTFNPSSDVAALHK ddPTM_A459_MK2206_30min_R2 2 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 0 ; 110.57 5.08E-07 13061500 66624 105731 97109 117410 109896 106695 103809 82741 85376 76411 FALSE TRUE 71724.78467 100480.5523 100346.5656 107817.2274 105580.9309 110755.353 90178.7536 93555.53279 92801.85016 73917.71533 0.970332813 1.359356845 1.357544198 1.45861147 1.428357605 1.498360068 1.219988378 1.265671326 1.255475088 1 16.17363255 -8.788000483 0.924607167 1.002017139 1.344797829 0.317793164 0.141281569 1.169546339 1.918763843 0.14050552 0.04683726 1.63E-09 8.788000483 0.34278069 GGPISFSS(ph)SR ddPTM_A459_MK2206_30min_R2 1 GGPISFSSSR 10 0 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 1 GGPISFS(0.285)S(0.647)S(0.067)R 96.171 0.021983 4397500 18292 24008 18016 24870 19676 25936 23217 18029 22726 16642 TRUE FALSE 19692.44958 22815.79763 18616.64445 22838.04144 18903.42138 26923.01265 20168.58001 20385.4522 24702.6664 16098.9729 1.223211549 1.417220699 1.156387091 1.418602391 1.174200459 1.672343498 1.252786754 1.266257936 1.534424994 1 13.97468103 -10.57009813 4.320750687 0.999974855 1.344238381 0.303022675 0.157471644 19078415.87 11668154.55 4320.48897 0.035852442 2.69E-11 10.57009813 0.344263526 GGPISFSSS(ph)R ddPTM_A459_MK2206_30min_R2 1 GGPISFSSSR 10 0 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 1 GGPISFSS(0.032)S(0.968)R 108.31 0.010756 3696900 8887.2 11233 7738.6 8254.5 8470.2 11232 13657 7929.6 8715.1 7422.2 TRUE FALSE 9567.610865 10675.18555 7996.601062 7580.080945 8137.617389 11659.44163 11863.8195 8966.025946 9473.123645 7180.014222 1.332533693 1.4867917 1.113730532 1.055719489 1.13337065 1.623874448 1.652339275 1.248747658 1.319373939 1 12.80977099 -6.728663835 24.99976507 1.402131306 1.22348223 0.097119429 0.208180972 402.8846626 307302.0149 0.072076508 0.072071677 1.87E-07 6.728663835 -0.178649076 GGPPFAFVEFEDPRDAEDAVYGR ddPTM_A459_MK2206_30min_R2 1 GGPPFAFVEFEDPRDAEDAVYGR 23 1 J3KTL2;Q07955;Q07955-3;Q07955-2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 0 72.793 0.004274 2997100 1152.7 3503 2320.9 4268 4020.2 3615.5 2470.3 3195.9 3507.1 3465.2 FALSE TRUE 1240.951598 3329.046114 2398.277648 3919.290747 3862.346748 3753.090386 2145.946643 3613.615103 3812.141219 3352.130808 0.370197844 0.993113427 0.715448706 1.169193857 1.152206453 1.119613345 0.640173897 1.078005397 1.137229254 1 11.71086273 -4.612842405 2.184487332 1.006631803 1.29E-34 0.530971508 0.175825517 1.067270417 3.815922381 0.047610787 2.485905446 2.44E-05 4.612842405 -1.006631803 GGPPS(ph)PTK ddPTM_A459_MK2206_30min_R2 1 GGPPSPTK 8 0 Q5TCQ9-3;Q5TCQ9-2;Q5TCQ9;Q5TCQ9-1 Q5TCQ9-3 MAGI3 "Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3" 1 GGPPS(0.999)PT(0.001)K 97.813 0.019965 33630000 108060 102650 106100 105630 115750 82949 112470 112320 98557 110320 TRUE FALSE 116333.1567 97552.55027 109637.321 96999.69111 111205.0734 86105.68232 97702.5539 127000.6097 107129.3097 106720.2674 1.090075573 0.914095819 1.027333642 0.908915368 1.042023939 0.806835331 0.915501397 1.190032715 1.003832845 1 16.70347466 -7.733698577 24.99538597 1.072699808 0.954367191 0.223623963 0.090655067 272.8787213 245873.1097 0.041312393 0.02384494 1.85E-08 7.733698577 -0.118332617 GGPS(ph)PGDVEAIK ddPTM_A459_MK2206_30min_R1 2 GGPSPGDVEAIK 12 0 P09661;H0YLR3;H0YMA0 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 1 GGPS(1)PGDVEAIK;GGPS(1)PGDVEAIK 136.3 0.0014186 11408000 4089.6 5070.9 4795.9 4125.7 4436.6 3873.4 4308.3 4092 3639 3781.3 TRUE FALSE 3741.758045 4740.783488 4470.36767 4443.462129 4259.880827 4092.708561 4020.901168 4056.224075 4017.287072 4249.755991 0.880464208 1.115542515 1.051911611 1.045580532 1.002382451 0.963045542 0.946148714 0.954460464 0.94529829 1 12.05316429 -6.623954289 2.919282254 0.957353088 1.031681205 0.200445417 0.057145627 0.360179408 6.190712861 0.019653072 0.019719401 2.38E-07 6.623954289 0.074328117 GGPS(ph)PGDVEAIK ddPTM_A459_MK2206_30min_R2 2 GGPSPGDVEAIK 12 0 P09661;H0YLR3;H0YMA0 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 1 GGPS(1)PGDVEAIK;GGPS(1)PGDVEAIK 119.17 0.0043427 9799400 62749 81602 69762 63991 73798 58117 76641 62913 55185 75053 TRUE FALSE 67553.11169 77549.76334 72087.83026 58762.7306 70900.31971 60328.68316 66577.94464 71135.94511 59984.89155 72604.02676 0.930432026 1.068119315 0.99289025 0.809359112 0.976534262 0.83092751 0.917000718 0.979779611 0.826192351 1 16.14776194 -5.554999774 24.6767294 0.904841179 1.007082995 0.257661188 0.07094027 186.1131973 142979.1024 0.017919196 0.03103733 2.79E-06 5.554999774 0.102241817 GGPTSHPSPVPPPASS(ph)PSPLSGSALCGGK ddPTM_A459_MK2206_30min_R2 1 GGPTSHPSPVPPPASSPSPLSGSALCGGK 29 0 J3KR72;P49848-4;P49848-2;P49848;P49848-3 J3KR72 TAF6 Transcription initiation factor TFIID subunit 6 1 GGPTSHPSPVPPPAS(0.201)S(0.667)PS(0.062)PLS(0.035)GS(0.035)ALCGGK 81.763 1.37E-05 11217000 14583 32712 23655 45531 46352 55631 40702 27588 32348 25394 TRUE FALSE 15699.48569 31087.56965 24443.64589 41810.97165 44531.98758 57748.07669 35357.77851 31193.84632 35161.57057 24565.39586 0.639089465 1.265502491 0.995043843 1.702027189 1.812793404 2.350789583 1.439332739 1.269828767 1.431345571 1 14.58433987 -5.756933226 24.89897112 1.620462367 0.996440793 0.357037805 0.367914213 120.7542202 667221.8177 0.105561456 0.175163084 1.75E-06 5.756933226 -0.624021574 GGQGDPAVPAQQPADPS(ph)TPERQSSPSGS(ph)EQLVR ddPTM_A459_MK2206_30min_R2 1 GGQGDPAVPAQQPADPSTPERQSSPSGSEQLVR 33 1 O15231-3;O15231-2;H7BZT5;O15231-4;O15231-7;O15231;O15231-8;O15231-6;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 GGQGDPAVPAQQPADPS(0.491)T(0.491)PERQS(0.175)S(0.175)PS(0.11)GS(0.558)EQLVR 70.028 0.00018948 6672800 9766.6 25811 12879 23526 26327 24329 21376 13868 27343 16119 TRUE FALSE 10514.33841 24529.26327 13308.37943 21603.85054 25293.2697 25254.85714 18569.30552 15680.59522 29721.24472 15593.03835 0.674296963 1.573090678 0.85348212 1.385480498 1.622087314 1.619623872 1.190871535 1.005615125 1.906058592 1 13.92861445 -4.749367475 24.94892706 1.348315294 0.674295394 0.287578115 0.319367782 728.423674 1505333.481 0.077654377 1.281586475 1.78E-05 4.749367475 -0.674019899 GGQGDPAVPAQQPADPST(ph)PER ddPTM_A459_MK2206_30min_R1 3 GGQGDPAVPAQQPADPSTPER 21 0 O15231-3;O15231-2;H7BZT5;O15231-4;O15231-7;O15231;O15231-8;O15231-6;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 GGQGDPAVPAQQPADPS(0.26)T(0.74)PER;GGQGDPAVPAQQPADPS(0.004)T(0.996)PER;GGQGDPAVPAQQPADPS(0.083)T(0.917)PER 273.52 6.94E-60 51760800 14680.4 14319 12828.4 10568.5 13762.6 13465.5 15511.4 12766.1 13676.7 12478.9 TRUE FALSE 13431.75489 13386.8305 11957.64395 11382.4877 13214.4065 14227.90497 14476.66281 12654.48733 15098.44191 14024.88034 0.957709054 0.954505862 0.852602208 0.8115925 0.942211711 1.014476033 1.032212928 0.902288435 1.076546932 1 13.77570084 -6.55386336 5.334540122 0.99941464 0.893164458 0.452997198 0.057429607 0.184263153 14.01274873 0.019764139 0.0201655 2.79E-07 6.55386336 -0.106250182 GGQGDPAVPAQQPADPST(ph)PER ddPTM_A459_MK2206_30min_R2 4 GGQGDPAVPAQQPADPSTPER 21 0 O15231-3;O15231-2;H7BZT5;O15231-4;O15231-7;O15231;O15231-8;O15231-6;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 GGQGDPAVPAQQPADPS(0.011)T(0.989)PER;GGQGDPAVPAQQPADPS(0.045)T(0.955)PER;GGQGDPAVPAQQPADPS(0.089)T(0.911)PER;GGQGDPAVPAQQPADPS(0.047)T(0.953)PER 189.98 3.54E-16 150276000 516410 610090 559350 641290 591470 576210 609280 494969 515880 596300 TRUE FALSE 555946.7467 579793.8178 577998.4498 588894.5556 568245.9159 598138.0753 529280.8041 559663.1478 560750.3099 576842.7798 0.963775167 1.005115844 1.00200344 1.020892653 0.985096695 1.036916984 0.917547766 0.970217826 0.972102503 1 19.13781864 -7.252100519 24.99992766 0.962485175 1.00247777 0.324505296 0.026289478 748.2377719 2003021.527 0.00973716 0.00743712 5.60E-08 7.252100519 0.039992595 GGQVSLTVHGTQQVHS(ph)PPEQSPVQANSSSSK ddPTM_A459_MK2206_30min_R2 1 GGQVSLTVHGTQQVHSPPEQSPVQANSSSSK 31 0 P22670 P22670 RFX1 MHC class II regulatory factor RFX1 1 GGQVSLTVHGTQQVHS(1)PPEQSPVQANSSSSK 117.33 3.75E-16 6897800 13567 28858 18663 39455 29654 42464 36955 27386 29379 24176 TRUE FALSE 14605.69995 27424.95368 19285.21511 36231.40029 28489.63496 44079.99728 32102.76411 30965.44423 31934.33231 23387.1391 0.624518454 1.17265107 0.824607705 1.549201898 1.21817529 1.884796472 1.372667429 1.324037288 1.365465531 1 14.51342777 -5.757631052 24.99999358 1.414279525 0.903798178 0.469270524 0.2486932 82.85225075 543878.4834 0.065601145 0.10833279 1.75E-06 5.757631052 -0.510481347 GGRPGGFPDHPHR ddPTM_A459_MK2206_30min_R1 2 GGRPGGFPDHPHR 13 1 O00625 O00625 PIR Pirin 0 ; 105.03 0.005925 4404900 5035.7 5145.3 5344.9 4316.1 5411.8 4732.8 5533.8 5130.9 4450.7 4502.6 FALSE TRUE 4607.387271 4810.340035 4982.10308 4648.52677 5196.236546 5000.767046 5164.650299 5086.041082 4913.366192 5060.416081 0.910475976 0.95058192 0.984524395 0.918605643 1.026839782 0.988212622 1.020597954 1.005063813 0.970941147 1 12.3050403 -6.262543555 24.99911125 1.002442017 0.94483358 0.611822726 0.023683881 71.77885216 1625106.349 0.0071468 0.008570183 5.46E-07 6.262543555 -0.057608438 GGRS(ph)PDEVTLTSIVPTR ddPTM_A459_MK2206_30min_R1 4 GGRSPDEVTLTSIVPTR 17 1 A0A0C4DGG1;Q9UKS6;H0YDM6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 GGRS(1)PDEVTLTSIVPTR;GGRS(1)PDEVTLTSIVPTR;GGRS(1)PDEVTLTSIVPTR;GGRS(1)PDEVTLTSIVPTR 127.37 0.00060371 36970000 7242.4 4866.8 5121.3 5676 5525.9 7255.9 6415.2 5245 4704.2 3877.58 TRUE FALSE 6626.395849 4549.970435 4773.680425 6113.166503 5305.791702 7666.722788 5987.253713 5199.143518 5193.218424 4357.963885 1.520525645 1.044058775 1.095392378 1.402757495 1.21749327 1.759244223 1.373864922 1.193021249 1.191661648 1 12.08943853 -8.417546911 1.636018847 1.012560337 1.331073946 0.220200547 0.197227929 0.611688672 3.478053179 0.197751841 0.057955271 3.82E-09 8.417546911 0.318513609 GGRS(ph)PRPGSSAPEHSPR ddPTM_A459_MK2206_30min_R2 1 GGRSPRPGSSAPEHSPR 17 2 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 GGRS(0.997)PRPGS(0.003)SAPEHSPR 85.988 0.004471 648160 0 1698.7 965.86 1564 1844.7 3380.6 1162.5 1214.3 1699.4 1750 TRUE FALSE 0 1614.345028 998.0612903 1436.216197 1772.267809 3509.251102 1009.862354 1373.013179 1847.21074 1692.897643 0 0.953598721 0.589557965 0.848377457 1.046884208 2.072925741 0.596528891 0.811043234 1.091153235 1 10.72527903 -4.967411707 0.977913116 1.083335736 2.64E-14 0.333433922 0.404591039 2.099296613 1.966393902 0.144585593 2.253213914 1.08E-05 4.967411707 -1.083335736 GGS(ph)DGTPRGS(ph)PSPASVSSGR ddPTM_A459_MK2206_30min_R1 1 GGSDGTPRGSPSPASVSSGR 20 1 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 2 GGS(0.5)DGT(0.5)PRGS(0.984)PS(0.016)PASVSSGR 110.56 0.012798 2941200 1769.6 1328.6 1549.2 1313.8 1737.5 1494.8 1431.2 1443.5 1100.2 650.02 TRUE FALSE 1619.086227 1242.107899 1444.04462 1414.989104 1668.291696 1579.434284 1335.727259 1430.879632 1214.569727 730.549385 2.216258422 1.7002381 1.97665572 1.936883574 2.283612484 2.16198154 1.828387357 1.958635051 1.662542947 1 9.512837992 -8.755374399 1.169900969 0.999703201 2.019699908 0.780074229 0.164495159 0.397079382 1.029629519 0.162257521 0.050225591 1.76E-09 8.755374399 1.019996707 GGS(ph)GGGGEGIQDR ddPTM_A459_MK2206_30min_R2 1 GGSGGGGEGIQDR 13 0 O43823 O43823 AKAP8 A-kinase anchor protein 8 1 GGS(1)GGGGEGIQDR 98.592 0.01243 4808200 3589 9110.2 8781.4 10650 9976.3 10085 9663.8 9190 11999 10037 TRUE FALSE 3863.776599 8657.800715 9074.167493 9779.860932 9584.580335 10468.79174 8394.931452 10391.16455 13042.65133 9709.493512 0.397938018 0.891684072 0.934566513 1.00724728 0.987134944 1.078201631 0.864610645 1.070206653 1.343288537 1 13.24518033 -4.626111513 1.553684549 1.03763756 5.20E-28 0.724459036 0.118294584 0.887284979 1.522894582 0.0338418 1.57743244 2.37E-05 4.626111513 -1.03763756 down GGS(ph)GGGGGGGGGGYNR ddPTM_A459_MK2206_30min_R2 4 GGSGGGGGGGGGGYNR 16 0 H3BPE7;P35637-2;P35637;H3BNZ4 H3BPE7 FUS RNA-binding protein FUS 1 GGS(1)GGGGGGGGGGYNR;GGS(1)GGGGGGGGGGYNR;GGS(1)GGGGGGGGGGYNR;GGS(1)GGGGGGGGGGYNR 183.41 8.71E-07 21044900 14353.4 9459.19 12037.1 11992.4 10966.1 14480.4 14816.9 14216.29 14924.4 13252.12 TRUE FALSE 15452.30734 8989.46038 12438.41091 11012.58256 10535.51581 15031.46177 12871.42323 16074.40791 16222.49733 12819.70441 1.205355977 0.701222126 0.970257231 0.859035607 0.821822054 1.172527953 1.004034323 1.253882882 1.265434585 1 13.64607538 -6.768949893 24.99886217 1.146597319 0.900199659 0.375880042 0.146143062 171.1314183 569610.0948 0.049094937 0.044135854 1.70E-07 6.768949893 -0.24639766 GGS(ph)GSGPTIEEVD ddPTM_A459_MK2206_30min_R2 1 GGSGSGPTIEEVD 13 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 1 GGS(0.881)GS(0.119)GPTIEEVD 143 0.0007459 7323200 40029 49612 44744 48112 51615 48803 42404 35187 48197 37444 TRUE FALSE 43093.65102 47148.34022 46235.74263 44181.0957 49588.33576 50660.23236 36836.30386 39786.06172 52389.08794 36222.20535 1.189702576 1.301641901 1.276447477 1.219724069 1.369003772 1.398596024 1.016953648 1.098388719 1.446325188 1 15.14458677 -13.48667968 0.29538228 2.66E-13 1.268608985 0.254064564 0.127854546 194.89743 3.233388365 119.0389649 0.137049636 3.26E-14 13.48667968 1.268608985 GGS(ph)GSVLQDEEVLASLER ddPTM_A459_MK2206_30min_R1 1 GGSGSVLQDEEVLASLER 18 0 A0A0D9SG79;Q9NZ09-2;Q9NZ09;Q9NZ09-3;Q9NZ09-4 A0A0D9SG79 UBAP1 Ubiquitin-associated protein 1 1 GGS(0.999)GS(0.001)VLQDEEVLASLER 149.82 0.00011941 0 626.32 607.95 510.15 480.42 478.57 385.29 454.43 412.59 302.27 275.48 TRUE FALSE 573.0481951 568.3723445 475.5224394 517.4220316 459.5075435 407.1047868 424.1158039 408.9827691 333.6920482 309.6085422 1.850879795 1.835777335 1.535882815 1.671213682 1.484156543 1.314901663 1.369845292 1.320967329 1.077786956 1 8.274301466 -5.153143283 0.208844931 0.913573685 2.5675373 0.922786144 0.07605961 2.865042427 0.133907294 0.162321828 1.246898296 7.03E-06 5.153143283 1.653963615 GGS(ph)PAPLPAKVDEATSGLIR ddPTM_A459_MK2206_30min_R1 2 GGSPAPLPAKVDEATSGLIR 20 1 A0A087WWH3;Q9NZM4-2;Q9NZM4 A0A087WWH3 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein 1 GGS(1)PAPLPAKVDEATSGLIR;GGS(1)PAPLPAKVDEATSGLIR 67.194 0.0081307 30101000 3098.6 3358 2951.7 2678.5 3214.4 2589.5 2320.2 3228.6 2298.4 1788.04 TRUE FALSE 2835.047799 3139.39359 2751.346828 2884.798534 3086.363641 2736.115252 2165.423691 3200.372691 2537.326905 2009.555894 1.410783252 1.56223253 1.369131775 1.435540331 1.535843641 1.361552202 1.077563305 1.592577096 1.26263067 1 10.97266099 -13.31850972 0.161218836 8.09E-11 1.526388774 0.47423298 0.136258091 76.86594799 1.00942114 25.7563736 0.597053888 4.80E-14 13.31850972 1.526388774 GGS(ph)PDLWK ddPTM_A459_MK2206_30min_R1 4 GGSPDLWK 8 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 GGS(1)PDLWK;GGS(1)PDLWK;GGS(1)PDLWK;GGS(1)PDLWK 123.86 0.0057027 468120000 26395.6 28873.7 29305.7 24117.5 27148.9 23185 29082 27059.8 24725.7 22726.3 TRUE FALSE 24150.51561 26994.01688 27316.51073 25975.03403 26067.50182 24497.71466 27141.99284 26823.21902 27296.025 25541.80562 0.945528909 1.056856249 1.069482367 1.016961542 1.020581795 0.959122273 1.06264973 1.050169257 1.06868032 1 14.6405729 GGS(ph)PDLWK ddPTM_A459_MK2206_30min_R2 6 GGSPDLWK 8 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 GGS(1)PDLWK;GGS(1)PDLWK;GGS(1)PDLWK;GGS(1)PDLWK;GGS(1)PDLWK;GGS(1)PDLWK 128.27 0.0043716 416402000 1504256 1636853 1515916 1661229 1587713 1293543 1862991 1456733 1374193 1564674 TRUE FALSE 1619422.996 1555569.26 1566455.883 1525501.277 1525371.41 1342769.685 1618378.044 1647133.005 1493717.823 1513618.816 1.06990147 1.02771533 1.034907776 1.007850366 1.007764567 0.887125392 1.069211103 1.088208595 0.986852045 1 20.5295705 -4.609966633 1.129868441 1.009287589 1.11362346 0.119120256 0.050765131 5.794467767 4.810560632 0.016775444 0.788513267 2.45E-05 4.609966633 0.10433587 GGS(ph)PPWAANSQPQPPR ddPTM_A459_MK2206_30min_R2 1 GGSPPWAANSQPQPPR 16 0 Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746 Q15746-4 MYLK "Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form" 1 GGS(0.999)PPWAANS(0.001)QPQPPR 121.45 0.0015243 22240000 5525.4 5997 6251.5 7992.2 8557.8 5896.2 7544.5 6107.1 5631.7 7899.9 TRUE FALSE 5948.428872 5699.1977 6459.92189 7339.211694 8221.777773 6120.584023 6553.898087 6905.318939 6121.535086 7642.12691 0.778373474 0.745760672 0.845304189 0.960362446 1.075849416 0.800900599 0.857601315 0.903586007 0.801025049 1 12.8997585 -5.477701756 4.123768453 0.909800597 0.764957893 0.359345027 0.080924997 0.252314557 9.062390178 0.022921691 0.048267892 3.33E-06 5.477701756 -0.144842703 GGS(ph)PQMDDIK ddPTM_A459_MK2206_30min_R2 1 GGSPQMDDIK 10 0 A0A3B3ITG6;A0A3B3IUB1;Q13144 A0A3B3ITG6 EIF2B5 Translation initiation factor eIF-2B subunit epsilon 1 GGS(1)PQMDDIK 120.6 0.0050371 100490000 675320 607610 558430 507870 385100 455710 659970 490470 384220 753900 TRUE FALSE 727023.0184 577436.9709 577047.7775 466375.3964 369979.039 473052.3634 573315.1462 554576.113 417638.7611 729300.3047 0.996877437 0.791768449 0.791234796 0.639483342 0.507306848 0.648638648 0.786116696 0.76042216 0.572656776 1 19.47615347 -4.685108386 1.360082891 0.690756595 1.17008051 0.301103729 0.129820365 1.884173954 2.657911116 0.03744119 1.329237092 2.06E-05 4.685108386 0.479323915 GGS(ph)PYNQFDIIPGDTLGGHTGPAGDSWLPAK ddPTM_A459_MK2206_30min_R1 1 GGSPYNQFDIIPGDTLGGHTGPAGDSWLPAK 31 0 Q9UPQ9;Q9UPQ9-1;H0Y720;Q9UPQ9-2 Q9UPQ9;Q9UPQ9-2 TNRC6B Trinucleotide repeat-containing gene 6B protein 1 GGS(0.996)PY(0.003)NQFDIIPGDT(0.001)LGGHTGPAGDSWLPAK 81.986 6.06E-06 20082000 4087.5 2688.7 3887.5 2350.3 4614 4645.7 5060.6 4129.4 3163.3 2663.6 TRUE FALSE 3739.836661 2513.665141 3623.627331 2531.320513 4430.21461 4908.735519 4723.016608 4093.297091 3492.136355 2993.586877 1.249282822 0.839683378 1.210463394 0.84558111 1.479901801 1.63975048 1.577711555 1.36735537 1.166539171 1 11.54765942 -6.273187605 24.89715713 1.413929641 1.034655632 0.357085666 0.216244643 694.0025787 1470746.056 0.065993113 0.075441213 5.33E-07 6.273187605 -0.379274009 GGS(ph)PYNQFDIIPGDTLGGHTGPAGDSWLPAK ddPTM_A459_MK2206_30min_R2 1 GGSPYNQFDIIPGDTLGGHTGPAGDSWLPAK 31 0 Q9UPQ9;Q9UPQ9-1;H0Y720;Q9UPQ9-2 Q9UPQ9;Q9UPQ9-2 TNRC6B Trinucleotide repeat-containing gene 6B protein 1 GGS(0.946)PY(0.015)NQFDIIPGDT(0.038)LGGHT(0.002)GPAGDSWLPAK 82.813 4.21E-06 8692000 17613 41167 30782 46574 41302 36410 42349 30782 30634 30497 TRUE FALSE 18961.46482 39122.70664 31808.25652 42768.75522 39680.27595 37795.60806 36788.52543 34805.31309 33298.48995 29501.88539 0.642720442 1.326108692 1.078177076 1.44969566 1.345008139 1.281125174 1.246988962 1.179765721 1.128690235 1 14.84851954 -4.756411024 24.99996507 1.240232507 0.642719523 0.649995209 0.128069098 94.17178766 468150.1428 0.031221676 0.253718204 1.75E-05 4.756411024 -0.597512983 GGS(ph)REYDTGGGSSSSR ddPTM_A459_MK2206_30min_R1 2 GGSREYDTGGGSSSSR 16 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 GGS(0.975)REYDT(0.025)GGGSSSSR;GGS(0.999)REYDT(0.001)GGGSSSSR 295.22 1.56E-74 31525000 6215.8 6563.8 6930.7 7203.1 8684.7 6974.5 7966.5 8049.6 4517.9 2896.9 TRUE FALSE 5687.11357 6136.495427 6460.263394 7757.88401 8338.770009 7369.390163 7435.069321 7979.223196 4987.551872 3255.789842 1.746769246 1.884794696 1.984238451 2.382796306 2.561212613 2.263472312 2.283645346 2.450779559 1.531902277 1 11.66879186 -8.491101837 3.890506012 1.004067951 2.19817851 0.717219204 0.244298231 0.109066275 3.966215777 0.263687016 0.06924933 3.23E-09 8.491101837 1.19411056 GGS(ph)REYDTGGGSSSSR ddPTM_A459_MK2206_30min_R2 1 GGSREYDTGGGSSSSR 16 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 GGS(1)REYDTGGGSSSSR 167.95 6.58E-05 1872500 2806.7 6787 5032.9 6065.3 5595.6 6611.3 7246.7 3615 5634.1 3041.3 TRUE FALSE 3021.58311 6449.967449 5200.694374 5569.745588 5375.888628 6862.897654 6295.199585 4087.492912 6124.143834 2942.06263 1.02702882 2.192328397 1.767703488 1.893143107 1.827251593 2.332682379 2.139723173 1.389328993 2.081581735 1 11.52261224 -11.00176014 3.10528062 0.979187386 1.867484594 0.317981836 0.372708456 53328491.77 65684599.46 9611451.005 0.091841645 9.96E-12 11.00176014 0.888297208 GGS(ph)SKDLLDNQSQEEQR ddPTM_A459_MK2206_30min_R2 2 GGSSKDLLDNQSQEEQR 17 1 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 GGS(0.953)S(0.047)KDLLDNQSQEEQR;GGS(0.802)S(0.193)KDLLDNQS(0.005)QEEQR 99.915 0.0031553 14207700 41237 36467 35316 34774.4 33495.9 29578.7 39505 41689 19616.3 31963 TRUE FALSE 44394.13643 34656.10181 36493.41781 31933.22028 32180.68266 30704.33816 34317.94605 47137.89544 21322.49032 30920.04993 1.435771822 1.120829426 1.180250934 1.032767423 1.040770721 0.993023563 1.10989297 1.524509034 0.689600773 1 14.91625503 GGSDGYGS(ph)GR ddPTM_A459_MK2206_30min_R2 1 GGSDGYGSGR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GGSDGYGS(1)GR 92.112 0.027084 10261000 34596 40097 36564 41627 54278 50382 65931 105100 79193 54694 TRUE FALSE 37244.69636 38105.84129 37783.02551 38225.94094 52146.77299 52299.32231 57274.1805 118836.9309 86081.06399 52909.33926 0.703934256 0.720210115 0.714108814 0.722480029 0.985587303 0.988470524 1.082496612 2.246048288 1.626954054 1 15.69123478 -7.574134543 6.731659285 1.703510486 0.820217974 0.595254217 0.299423944 0.12686708 12.74647724 0.138789217 0.0797502 2.67E-08 7.574134543 -0.883292512 GGSDGYGSGR ddPTM_A459_MK2206_30min_R2 1 GGSDGYGSGR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 140.11 0.020135 7193100 15560 6815.2 10295 10843 18492 8070.2 13562 68990 31408 18409 FALSE TRUE 16751.28556 6476.767078 10638.23016 9957.092215 17765.91117 8377.317116 11781.29311 78007.22988 34139.81107 17808.31584 0.940644007 0.363693408 0.597374297 0.55912599 0.997618827 0.470416023 0.66156133 4.38038221 1.917071293 1 14.12026346 -7.670344982 14.54269992 2.611237533 0.64351517 0.499739795 0.808649691 0.622609146 96.92334631 0.350860799 0.202539017 2.14E-08 7.670344982 -1.967722363 GGSGS(ph)GPTIEEVD ddPTM_A459_MK2206_30min_R1 1 GGSGSGPTIEEVD 13 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 1 GGS(0.071)GS(0.929)GPTIEEVD 122.7 0.0025965 5545200 2358.4 2437.7 2270.1 2146.4 2250.2 2285.7 2639.3 2055.1 2286.8 1915 TRUE FALSE 2157.805696 2279.005287 2116.011937 2311.7161 2160.569769 2415.114359 2463.237113 2037.132477 2524.521043 2152.244658 1.002583832 1.058896942 0.983165148 1.074095406 1.003868107 1.122137463 1.144496795 0.946515291 1.172971221 1 11.07162637 -6.746270298 24.9971751 1.078085909 1.026888101 0.13302763 0.067117675 516.6636096 851410.8336 0.02110489 0.021032576 1.79E-07 6.746270298 -0.051197809 GGSGS(ph)HNWGTVK ddPTM_A459_MK2206_30min_R1 2 GGSGSHNWGTVK 12 0 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 GGS(0.46)GS(0.54)HNWGTVK;GGS(0.218)GS(0.782)HNWGTVK 167.73 0.00041747 7654000 2815 2721.6 2969.3 2288.3 2646.27 2755.9 3519.4 2578.8 2857.6 3191.4 TRUE FALSE 2575.569468 2544.423345 2767.752189 2464.545262 2540.863462 2911.936676 3284.627248 2556.253823 3154.657746 3586.774726 0.718073942 0.709390341 0.771654871 0.687120171 0.708397838 0.811853796 0.915760676 0.712688702 0.879524918 1 11.80847142 -6.886879848 4.186748206 0.854384561 0.719757898 0.518462035 0.07063613 0.202521612 6.384142165 0.024835535 0.021806727 1.30E-07 6.886879848 -0.134626663 GGSGSHNWGTVKDELTES(ph)PK ddPTM_A459_MK2206_30min_R1 1 GGSGSHNWGTVKDELTESPK 20 1 Q8NC51;Q8NC51-2 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 GGSGSHNWGT(0.008)VKDELT(0.403)ES(0.589)PK 56.746 0.017389 14684000 5951.1 5066.9 5640.2 4209.8 4527.6 4295 4980.7 4195.4 3581.6 2791.4 TRUE FALSE 5444.927695 4737.043889 5257.358938 4534.039525 4347.256105 4538.179188 4648.446591 4158.72006 3953.920137 3137.219706 1.735590174 1.509949679 1.675801962 1.445241312 1.385703429 1.446560845 1.481708974 1.325606891 1.260326183 1 11.61527085 -7.887784 0.060409824 4.34E-11 2.689263116 0.860650164 0.073702388 9.295509547 0.573542313 12.3041028 12.49944613 1.29E-08 7.887784 2.689263116 GGSGSVLQDEEVLAS(ph)LER ddPTM_A459_MK2206_30min_R2 2 GGSGSVLQDEEVLASLER 18 0 A0A0D9SG79;Q9NZ09-2;Q9NZ09;Q9NZ09-3;Q9NZ09-4 A0A0D9SG79 UBAP1 Ubiquitin-associated protein 1 1 GGSGSVLQDEEVLAS(1)LER;GGSGSVLQDEEVLAS(1)LER 136.38 0.00041745 0 12932.8 9637.7 10704.8 11887.6 12446.4 11852 10197.9 8769.4 10928 10286.9 TRUE FALSE 13922.94511 9159.105833 11061.69269 10916.34505 11957.6918 12303.03617 8858.90348 9915.59069 11878.49769 9951.239295 1.399116703 0.920398511 1.111589457 1.096983474 1.201628405 1.236332059 0.890231178 0.996417672 1.193670189 1 13.28066049 -7.250110855 24.98855091 1.019781226 1.146761162 0.207284459 0.133277662 1318.657679 2908710.576 0.050742742 0.038926564 5.62E-08 7.250110855 0.126979937 GGSISVQVNSIKFDS(ph)E ddPTM_A459_MK2206_30min_R1 6 GGSISVQVNSIKFDSE 16 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 GGSISVQVNSIKFDS(1)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNS(0.008)IKFDS(0.992)E;GGSISVQVNS(0.001)IKFDS(0.999)E;GGSISVQVNS(0.002)IKFDS(0.998)E;GGSISVQVNS(0.001)IKFDS(0.999)E 184.87 3.80E-06 598094400 39887.3 49115.8 48235.4 42454.5 36670.5 30904.1 35717.2 41382.4 38429.4 31418.9 TRUE FALSE 36494.67568 45918.35249 44961.31544 45724.35295 35209.83633 32653.86344 33334.57076 41020.59804 42424.27365 35311.31053 1.033512354 1.300386528 1.273283681 1.29489255 0.997126298 0.924742326 0.944019643 1.161684384 1.201435829 1 15.10784275 -6.265297612 24.91157158 1.035873585 1.234278255 0.418277485 0.108022017 327.9508772 2117487.192 0.035547784 0.041855413 5.43E-07 6.265297612 0.19840467 GGSISVQVNSIKFDS(ph)E ddPTM_A459_MK2206_30min_R2 15 GGSISVQVNSIKFDSE 16 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 GGSISVQVNSIKFDS(1)E;GGSISVQVNS(0.001)IKFDS(0.999)E;GGSISVQVNS(0.003)IKFDS(0.997)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNS(0.013)IKFDS(0.987)E;GGSISVQVNS(0.012)IKFDS(0.988)E;GGSISVQVNS(0.012)IKFDS(0.988)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNS(0.004)IKFDS(0.996)E;GGSISVQVNS(0.006)IKFDS(0.994)E;GGSISVQVNS(0.018)IKFDS(0.982)E;GGSISVQVNS(0.077)IKFDS(0.923)E;GGSISVQVNS(0.001)IKFDS(0.999)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNS(0.016)IKFDS(0.984)E 197.29 4.44E-06 148592400 849591.8 1079470 990620.6 1038590 1137563 856263.7 1263729 855872.3 931620.9 1137153 TRUE FALSE 914637.2014 1025865.089 1023647.396 953733.8747 1092896.561 888849.4151 1097799.864 967737.7483 1012651.602 1100047.791 0.831452242 0.932564111 0.930548113 0.866993128 0.993499164 0.808009818 0.997956519 0.879723369 0.920552371 1 20.06913477 -14.52287875 0.196105201 1.401215876 0.893548371 0.199426701 0.058545105 231.4570995 2.274390758 36.39100755 0.136733367 3.00E-15 14.52287875 -0.507667505 GGSSVEAPCPSDVT(ph)PEDDR ddPTM_A459_MK2206_30min_R1 1 GGSSVEAPCPSDVTPEDDR 19 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 GGSSVEAPCPS(0.03)DVT(0.97)PEDDR 139.12 0.00028503 0 738.97 624.12 616.51 579.91 674.4 487.98 827.4 795.68 719.11 884.98 TRUE FALSE 676.116721 583.4896746 574.6630189 624.5747687 647.5372199 515.6090059 772.2056557 788.7234536 793.8640579 994.6180037 0.679775269 0.586647007 0.577772589 0.627954417 0.651041121 0.518399028 0.776384152 0.79299133 0.798159751 1 9.957998735 -8.181456046 0.744193125 0.988538782 0.603118345 0.810658915 0.058843307 0.256357529 0.306662631 0.056294936 0.023219842 6.58E-09 8.181456046 -0.385420437 GGSSVEAPCPSDVT(ph)PEDDR ddPTM_A459_MK2206_30min_R2 1 GGSSVEAPCPSDVTPEDDR 19 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 GGSSVEAPCPS(0.373)DVT(0.627)PEDDR 207.16 5.52E-16 8054300 29590 22792 25272 25537 21815 24956 29557 22990 17477 27759 TRUE FALSE 31855.43315 21660.18242 26114.55587 23450.54541 20958.43349 25905.71807 25676.1304 25994.87194 18997.11787 26853.2261 1.186279556 0.806613788 0.972492309 0.873285963 0.780481027 0.9647153 0.956165576 0.968035343 0.707442666 1 14.7128078 -4.750750408 24.99747297 0.893839734 1.186280173 0.470810316 0.093538223 406.1004587 949653.2579 0.022417367 0.31958284 1.78E-05 4.750750408 0.292440439 GGT(ph)PAFLPSSLSPQSSLPASR ddPTM_A459_MK2206_30min_R2 2 GGTPAFLPSSLSPQSSLPASR 21 0 Q96JY6;Q96JY6-3;Q96JY6-5;A0A087WVI1;E5RGS7;H0YBP7;B3KPU0 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 GGT(0.982)PAFLPS(0.004)S(0.001)LS(0.01)PQS(0.002)S(0.002)LPASR;GGT(0.932)PAFLPS(0.006)S(0.006)LS(0.048)PQS(0.006)S(0.002)LPASR 116.85 0.00017836 9002000 16886.2 20900.7 18411.5 19316.6 18545.5 21499 21448.6 17348 15605.5 20998.3 TRUE FALSE 18179.02046 19862.80163 19025.33022 17738.37199 17817.31049 22317.15951 18632.37306 19615.44316 16962.83818 20313.12719 0.894939528 0.977830811 0.936602722 0.873246735 0.877132818 1.098657006 0.917257736 0.965653539 0.835067788 1 14.31012474 GGTLGGGTLGPPS(ph)PPGAPSPPEPGGEIELVFRPHPLLVEK ddPTM_A459_MK2206_30min_R1 1 GGTLGGGTLGPPSPPGAPSPPEPGGEIELVFRPHPLLVEK 40 1 Q06587;Q06587-2 Q06587 RING1 E3 ubiquitin-protein ligase RING1 1 GGT(0.003)LGGGT(0.016)LGPPS(0.92)PPGAPS(0.062)PPEPGGEIELVFRPHPLLVEK 42.387 0.010149 7392400 1695.8 1848.1 1874 1335.6 1438.1 1451.5 1721.6 1470.4 2080.2 1751.8 TRUE FALSE 1551.563305 1727.788354 1746.798101 1438.468143 1380.817432 1533.682676 1606.755205 1457.544448 2296.444234 1968.826209 0.788065141 0.877572813 0.887228183 0.730622203 0.701340436 0.778983268 0.816098037 0.74031138 1.166402714 1 10.94312005 -8.257637857 24.9996067 1.083201371 0.791750306 0.750737444 0.067566577 151.9727616 999421.9196 0.052200646 0.018025263 5.53E-09 8.257637857 -0.291451065 GGTMTDLDEQEDESMET(ph)TGKDEDENSTGNKGEQTK ddPTM_A459_MK2206_30min_R2 1 GGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTK 35 2 Q8TAQ2;F8VXC8;Q8TAQ2-2;Q8TAQ2-3 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 1 GGT(0.001)MT(0.009)DLDEQEDES(0.098)MET(0.38)T(0.38)GKDEDENS(0.098)T(0.032)GNKGEQT(0.001)K 42.865 0.042449 4010200 6721.6 5160.5 6625.3 4605 6569.6 2731.2 6470.4 7304.7 6898.7 8335.9 TRUE FALSE 7236.210864 4904.237074 6846.184195 4228.756769 6311.644494 2835.13773 5620.828708 8259.449371 7498.736456 8063.900266 0.897358676 0.608171841 0.848991675 0.524405887 0.78270369 0.351583928 0.69703599 1.024249941 0.929914335 1 12.97726208 -7.724992118 6.715886677 0.983041459 0.662094522 0.471063747 0.151251673 0.152881851 19.67117014 0.07187276 0.04012312 1.88E-08 7.724992118 -0.320946937 GGTPAFLPSSLS(ph)PQSSLPASR ddPTM_A459_MK2206_30min_R1 2 GGTPAFLPSSLSPQSSLPASR 21 0 Q96JY6;Q96JY6-3;Q96JY6-5;A0A087WVI1;E5RGS7;H0YBP7;B3KPU0 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 GGTPAFLPS(0.008)S(0.207)LS(0.784)PQS(0.001)SLPASR;GGTPAFLPS(0.032)S(0.314)LS(0.628)PQS(0.007)S(0.019)LPASR 294.28 4.30E-87 59068000 8531.9 7823.4 7246.5 7239.1 7607.8 7189.1 8226.3 7439.7 6448 5580.4 TRUE FALSE 7806.217102 7314.095238 6754.62777 7796.656736 7304.765216 7596.140629 7677.538537 7374.655487 7118.292674 6271.742082 1.244664879 1.166198345 1.076993869 1.243140524 1.164710717 1.211169166 1.224147683 1.175854394 1.13497854 1 12.61465052 -8.705631688 2.012657355 1.000216063 1.187129288 0.601183974 0.046435554 0.485850747 3.658921722 0.045114924 0.012502126 1.97E-09 8.705631688 0.186913225 GGTPAFLPSSLS(ph)PQSSLPASR ddPTM_A459_MK2206_30min_R2 3 GGTPAFLPSSLSPQSSLPASR 21 0 Q96JY6;Q96JY6-3;Q96JY6-5;A0A087WVI1;E5RGS7;H0YBP7;B3KPU0 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 GGTPAFLPS(0.012)S(0.017)LS(0.96)PQS(0.001)S(0.01)LPASR;GGTPAFLPS(0.043)S(0.104)LS(0.853)PQSSLPASR;GGTPAFLPS(0.013)S(0.053)LS(0.924)PQS(0.004)S(0.004)LPASR 218.38 2.14E-20 30983500 47920 57377 54539 57314 70102 64513 64333 47082 53035 52053 TRUE FALSE 51588.79204 54527.74161 56357.30304 52631.26286 67349.44325 66968.08742 55885.99982 53235.77906 57647.88843 50354.51487 1.024511748 1.082876913 1.119210525 1.045214376 1.337505553 1.329932134 1.109850824 1.05721958 1.144840509 1 15.61983352 GGTPAFLPSSLSPQSS(ph)LPASR ddPTM_A459_MK2206_30min_R2 1 GGTPAFLPSSLSPQSSLPASR 21 0 Q96JY6;Q96JY6-3;Q96JY6-5;A0A087WVI1;E5RGS7;H0YBP7;B3KPU0 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 GGTPAFLPS(0.06)S(0.32)LS(0.2)PQS(0.018)S(0.403)LPASR 223.93 5.89E-21 14171000 37072 35646 38810 44189 49195 34145 45733 34218 35508 42025 TRUE FALSE 39910.26082 33875.87147 40103.90603 40578.61735 47263.35711 35444.4119 39728.20216 38690.41009 38596.42166 40653.72769 0.981712209 0.833278358 0.986475492 0.998152436 1.162583601 0.871861301 0.977233932 0.951706333 0.949394406 1 15.31110002 -5.380569039 12.85965964 0.987717997 0.907517685 0.148696664 0.076257717 1.219802166 124.6140288 0.020104027 0.041857013 4.16E-06 5.380569039 -0.080200312 GGTSQVGSPT(ph)LLSPAVPSK ddPTM_A459_MK2206_30min_R2 2 GGTSQVGSPTLLSPAVPSK 19 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 GGT(0.002)S(0.002)QVGS(0.074)PT(0.653)LLS(0.268)PAVPS(0.002)K;GGT(0.001)S(0.003)QVGS(0.118)PT(0.845)LLS(0.031)PAVPS(0.003)K 149.36 7.45E-05 11094700 77912 71202 65960 78505 70458 63876 83537 61091 59273 77243 TRUE FALSE 83877.00262 67666.21222 68159.07348 72090.89037 67691.4649 66306.84594 72568.49155 69075.80346 64428.4584 74722.56724 1.122512324 0.905565945 0.912161827 0.964780695 0.905903898 0.887373767 0.971172354 0.924430276 0.862235611 1 16.1892564 -4.758211331 24.99845998 0.92395924 1.122512598 0.689664673 0.039534398 49.19255762 380890.9751 0.009380523 0.065348263 1.74E-05 4.758211331 0.198553358 GGTSQVGSPTLLS(ph)PAVPSK ddPTM_A459_MK2206_30min_R2 2 GGTSQVGSPTLLSPAVPSK 19 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 GGTSQVGS(0.026)PT(0.052)LLS(0.922)PAVPSK;GGTSQVGS(0.158)PT(0.292)LLS(0.55)PAVPSK 161.14 1.50E-06 6660400 59346.6 61038.7 55062.6 64271.3 53696.5 54920.6 67886 55513.5 37833.5 70815 TRUE FALSE 63890.22133 58007.60692 56898.3596 59020.1292 51588.10561 57010.64192 58972.48665 62769.30506 41124.18944 68504.31235 0.932645247 0.846773071 0.830580699 0.861553487 0.753063622 0.832219753 0.860858019 0.916282536 0.600315338 1 16.06390719 -4.410165546 1.594938209 0.827341937 1.094148748 0.083582487 0.098553241 7.579626106 8.49230337 0.02561966 4.207220195 3.89E-05 4.410165546 0.266806811 GGTTSWGTS(ph)GQPSPSYDSSR ddPTM_A459_MK2206_30min_R2 1 GGTTSWGTSGQPSPSYDSSR 20 0 Q99081;Q99081-3;H0YNQ5 Q99081 TCF12 Transcription factor 12 1 GGTTSWGT(0.014)S(0.525)GQPS(0.462)PSYDSSR 251.56 4.43E-38 7744100 23238 27449 21402 28816 25314 29182 27832 19031 23267 22016 TRUE FALSE 25017.11915 26085.92257 22115.532 26461.64062 24320.04517 30292.54146 24177.62497 21518.41704 25290.7216 21297.61972 1.174643903 1.224828075 1.038403929 1.242469392 1.141913767 1.422343992 1.135226625 1.01036723 1.187490524 1 14.37840458 -7.520432975 24.96108659 1.073916681 1.205791453 0.279597303 0.102016177 137.5136661 1403489.042 0.046700454 0.027553012 3.02E-08 7.520432975 0.131874773 GGTTSWGTSGQPS(ph)PSYDSSR ddPTM_A459_MK2206_30min_R1 2 GGTTSWGTSGQPSPSYDSSR 20 0 Q99081;Q99081-3;H0YNQ5 Q99081 TCF12 Transcription factor 12 1 GGTTSWGT(0.309)S(0.003)GQPS(0.686)PS(0.002)YDSSR;GGTTSWGTS(0.024)GQPS(0.972)PS(0.003)YDSSR 282.97 3.76E-72 15719300 2755.4 2359.03 1828.58 1740.38 2468.07 2076.97 2238.2 1933.92 1730.94 1421.97 TRUE FALSE 2521.038761 2205.456718 1704.461084 1874.424369 2369.761546 2194.566247 2088.893762 1917.011941 1910.877407 1598.134379 1.577488598 1.38001957 1.066531768 1.172882828 1.482829965 1.373205079 1.307082677 1.199531132 1.195692573 1 10.64217301 -14.46998334 0.11719406 1.04E-11 1.459618906 0.377765957 0.13614591 199.5691006 1.540193865 47.15466097 1.567917217 3.39E-15 14.46998334 1.459618906 GGTTSWGTSGQPS(ph)PSYDSSR ddPTM_A459_MK2206_30min_R2 3 GGTTSWGTSGQPSPSYDSSR 20 0 Q99081;Q99081-3;H0YNQ5 Q99081 TCF12 Transcription factor 12 1 GGTTSWGT(0.229)S(0.022)GQPS(0.731)PS(0.018)YDSSR;GGTTSWGT(0.001)S(0.007)GQPS(0.992)PSYDSSR;GGTTSWGT(0.001)SGQPS(0.499)PS(0.499)Y(0.001)DSSR 391.67 2.49E-294 30177000 66352 76168 59774 68579 74987 67714 70362 46356 54887 61925 TRUE FALSE 71431.96014 72385.60788 61766.83533 62975.87633 72042.6336 70290.90372 61123.38488 52414.88836 59660.97205 59904.39232 1.192432764 1.208352261 1.031090258 1.051273102 1.202626899 1.173384805 1.020348968 0.874975713 0.99593652 1 15.87037417 -7.44727805 4.348714469 0.950241778 1.13868002 0.627121037 0.065456586 0.153028655 5.398272961 0.031280237 0.019989874 3.57E-08 7.44727805 0.188438241 GGTVS(ph)PPPGTSR ddPTM_A459_MK2206_30min_R2 2 GGTVSPPPGTSR 12 0 Q16584;Q16584-2;E9PID4 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 GGT(0.003)VS(0.832)PPPGT(0.04)S(0.126)R;GGT(0.024)VS(0.976)PPPGT(0.001)SR 89.44 0.025775 16330400 113062 121726 129690 133797 113976 138190 129392 95910 112270 118384 TRUE FALSE 121718.1136 115681.2638 134013.7999 122865.3571 109500.7296 143448.9173 112402.675 108445.7663 122035.0417 114521.1398 1.062844064 1.010130218 1.170210148 1.072861808 0.956161716 1.252597709 0.981501539 0.946949764 1.065611484 1 16.80525441 GGVDHAAAFGR ddPTM_A459_MK2206_30min_R2 1 GGVDHAAAFGR 11 0 I3L3Q4;F6TLX2;Q9HC38-2;Q9HC38 I3L3Q4 GLOD4 Glyoxalase domain-containing protein 4 0 93.561 0.032914 4280600 41108 48345 46718 47437 47130 48360 50056 40290 42495 42300 FALSE TRUE 44255.26009 45944.2576 48275.5548 43561.24536 45279.43939 50200.37369 43483.58707 45556.04134 46191.13829 40919.75446 1.081513334 1.122789181 1.179761595 1.064552951 1.106542304 1.226800462 1.062655132 1.113301923 1.12882247 1 15.32050987 -11.30624485 0.57813045 0.908032173 1.122729771 0.360925706 0.048131937 99.00552562 10.81688718 12.62632842 0.019845778 4.94E-12 11.30624485 0.214697598 GGVGAPGS(ph)PSTPPTR ddPTM_A459_MK2206_30min_R1 3 GGVGAPGSPSTPPTR 15 0 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 GGVGAPGS(0.957)PS(0.003)T(0.04)PPTR;GGVGAPGS(0.868)PS(0.009)T(0.123)PPTR;GGVGAPGS(0.851)PS(0.012)T(0.136)PPT(0.001)R 176.43 1.93E-05 17549400 6354.9 5831.6 5678.4 5361.9 6065.4 6268.6 6641.7 5617.5 5539.9 4569.9 TRUE FALSE 5814.382384 5451.96178 5292.966029 5774.874467 5823.802274 6623.522715 6198.644311 5568.38679 6115.79243 5136.053713 1.132071958 1.061507937 1.030551144 1.124379687 1.13390603 1.28961321 1.206888529 1.084176121 1.190757101 1 12.32644457 -6.099127708 2.92594056 1.165048241 1.074040447 0.147313423 0.076425179 0.421395552 6.971806109 0.023672914 0.032852177 7.96E-07 6.099127708 -0.091007793 GGVGAPGS(ph)PSTPPTR ddPTM_A459_MK2206_30min_R2 2 GGVGAPGSPSTPPTR 15 0 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 GGVGAPGS(0.935)PS(0.032)T(0.032)PPTR;GGVGAPGS(0.908)PS(0.037)T(0.055)PPTR 115.91 0.0023189 15658300 82249 93141 82566 95679 90659 98389 93235 70161 85202 97206 TRUE FALSE 88546.04668 88515.75338 85318.70923 87861.71964 87099.27214 102133.2623 80993.1325 79331.2836 92612.71595 94034.17618 0.941636863 0.941314711 0.907315964 0.934359434 0.926251238 1.086129177 0.861315915 0.843643097 0.984883579 1 16.52089757 -2.84673911 16.4310366 0.938357763 0.947835601 0 0.066221421 0 0 0.015202208 0 0.001423183 2.84673911 0.009477838 GGVT(ph)GSPEASISGSK ddPTM_A459_MK2206_30min_R1 1 GGVTGSPEASISGSK 15 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GGVT(0.821)GS(0.176)PEAS(0.003)ISGSK 165.86 0.00019515 757000000 3119.6 3171.4 2915.7 2443.5 2629.9 3530.3 3383.6 2958.6 2926.1 3251.9 TRUE FALSE 2854.261638 2964.941284 2717.790408 2631.698793 2525.145514 3730.182535 3157.886218 2932.733272 3230.278566 3654.769923 0.780968898 0.811252513 0.743628317 0.720072357 0.690917778 1.020634025 0.864045148 0.802439917 0.883852783 1 11.83556487 -6.745919051 24.99995724 0.898712569 0.750859595 0.59737267 0.067053826 196.3683395 316307.209 0.023076168 0.022997568 1.80E-07 6.745919051 -0.147852974 GGVT(ph)GSPEASISGSK ddPTM_A459_MK2206_30min_R2 3 GGVTGSPEASISGSK 15 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GGVT(0.401)GS(0.291)PEAS(0.291)IS(0.013)GS(0.005)K;GGVT(0.995)GS(0.005)PEASISGSK;GGVT(0.712)GS(0.287)PEAS(0.001)ISGSK 189.33 3.27E-14 43928400 111976 167340 110281.4 150987 125486.1 123159.3 145288.9 107994 109126 142177 TRUE FALSE 120548.9687 159030.1389 113958.1268 138650.8791 120558.8852 127846.2135 126212.2929 122109.1866 118617.5822 137537.7761 0.876478972 1.156265162 0.828558742 1.008093071 0.876551073 0.929535267 0.917655472 0.887822895 0.862436383 1 17.0694684 -5.28241821 24.92021511 0.912557738 1.016372144 0.198904924 0.082282333 969.4146829 1151541.41 0.019654388 0.040976564 5.22E-06 5.28241821 0.103814406 GGVTGS(ph)PEASISGSK ddPTM_A459_MK2206_30min_R1 3 GGVTGSPEASISGSK 15 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GGVT(0.078)GS(0.922)PEASISGSK;GGVT(0.072)GS(0.923)PEAS(0.005)ISGSK;GGVT(0.002)GS(0.944)PEAS(0.051)IS(0.003)GSK 265.64 3.22E-37 991709000 16220.8 17011.5 16544.5 13136.5 15023.1 14161.6 15928.4 14688.8 15047.5 14558.1 TRUE FALSE 14841.13578 15904.04826 15421.50544 14148.27551 14424.69812 14963.41755 14865.8455 14560.37737 16611.74147 16361.66734 0.907067445 0.972031024 0.942538747 0.864720888 0.881615414 0.914541119 0.908577665 0.889907921 1.015284148 1 13.99803215 -8.266268158 24.98338624 1.00764209 0.91090085 0.646445742 0.028842558 292.4668494 1513151.799 0.027498159 0.007994988 5.42E-09 8.266268158 -0.09674124 GGVTGS(ph)PEASISGSK ddPTM_A459_MK2206_30min_R2 5 GGVTGSPEASISGSK 15 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GGVT(0.038)GS(0.549)PEAS(0.4)IS(0.013)GSK;GGVT(0.012)GS(0.987)PEAS(0.001)ISGSK;GGVT(0.012)GS(0.804)PEAS(0.182)IS(0.002)GSK;GGVT(0.048)GS(0.95)PEAS(0.002)ISGSK;GGVT(0.127)GS(0.872)PEASISGSK 205.33 3.60E-06 1376174400 252592 226975 229965 256493 235841 221119 292627 207886 197202 279676 TRUE FALSE 271930.6377 215703.7516 237631.9183 235536.7014 226580.6973 229533.8385 254204.7234 235057.414 214354.2735 270550.195 1.005102353 0.797278123 0.878328394 0.870584112 0.837481183 0.8483965 0.939584329 0.868812584 0.79229022 1 18.04553676 GGVTGSPEAS(ph)ISGSK ddPTM_A459_MK2206_30min_R2 1 GGVTGSPEASISGSK 15 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GGVT(0.001)GS(0.192)PEAS(0.804)IS(0.001)GS(0.001)K 188.19 2.47E-05 862560000 55431 40323 47040 53485 61007 53966 60675 44918 45321 60884 TRUE FALSE 59674.83998 38320.61846 48608.29012 49115.10441 58611.55864 56019.71395 52708.29962 50788.93683 49262.93866 58897.36007 1.01320059 0.650633889 0.825305074 0.833910117 0.995147466 0.951141339 0.894917863 0.862329598 0.836420149 1 15.84591535 -6.071986483 8.673904571 0.916444113 0.814694052 0.177942691 0.095189546 0.607217871 68.89064139 0.027565096 0.035702007 8.47E-07 6.071986483 -0.101750061 GGVTGSPEASIS(ph)GSK ddPTM_A459_MK2206_30min_R1 1 GGVTGSPEASISGSK 15 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GGVTGS(0.002)PEAS(0.094)IS(0.484)GS(0.42)K 116.96 0.0026969 0 1240.2 877.4 992.18 814.18 1243 972.09 1160.5 817.2 1231.8 1143.2 TRUE FALSE 1134.714477 820.2811005 924.833586 876.8882847 1193.488678 1027.128896 1083.085162 810.0553066 1359.850018 1284.828247 0.88316433 0.638436384 0.719811063 0.682494557 0.928909121 0.79942895 0.842980504 0.630477504 1.058390506 1 10.3273598 -8.27640039 24.9850605 1.029195323 0.766305593 0.544916663 0.096313369 694.3960318 1159637.917 0.091116037 0.023919116 5.29E-09 8.27640039 -0.26288973 GGVTGSPEASISGS(ph)KGDLK ddPTM_A459_MK2206_30min_R2 4 GGVTGSPEASISGSKGDLK 19 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GGVTGSPEAS(0.007)IS(0.173)GS(0.82)KGDLK;GGVTGSPEAS(0.153)IS(0.269)GS(0.578)KGDLK;GGVTGSPEAS(0.061)IS(0.306)GS(0.633)KGDLK;GGVTGS(0.002)PEAS(0.033)IS(0.238)GS(0.727)KGDLK 98.887 0.00077701 92038000 260690 192294 221449 178810 221394 166477 332422 221487 205959 320741 TRUE FALSE 280648.6268 182744.9596 228831.9991 164200.651 212700.9591 172812.3989 288774.5921 250436.1114 223872.9415 310275.2474 0.904515037 0.58897692 0.737512905 0.529209637 0.685523453 0.556964825 0.930704574 0.807141767 0.721530136 1 18.24318908 -7.265621254 24.98121615 0.8487726 0.661333239 0.387086817 0.121085552 398.6983277 2381685.422 0.047590593 0.033388853 5.42E-08 7.265621254 -0.187439361 GGY(ph)KFFADLLDY(ph)IKALNR ddPTM_A459_MK2206_30min_R2 1 GGYKFFADLLDYIKALNR 18 2 P00492 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase 2 GGY(1)KFFADLLDY(1)IKALNR 58.814 0.044888 0 14132 15516 16079 13281 16578 12580 16187 11335 13442 15407 TRUE FALSE 15213.95679 14745.498 16615.06583 12195.89982 15927.06442 13058.74072 14061.62746 12816.52342 14611.16086 14904.27085 1.020778335 0.989347158 1.114785554 0.818282218 1.068624194 0.87617441 0.943462957 0.859922874 0.980333826 1 13.86343818 -5.748759593 24.99912739 0.93285773 1.036407994 0.298473288 0.074544756 280.7723589 553558.5585 0.018970332 0.032576443 1.78E-06 5.748759593 0.103550264 GGYFDEFGIIR ddPTM_A459_MK2206_30min_R1 1 GGYFDEFGIIR 11 0 P11413-3;P11413;P11413-2;E7EUI8;E7EM57 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 157.99 0.0078602 23094000 2391.5 2691.6 2623.8 2448.5 2425.1 2347.1 2792.7 2482.9 1914.6 1964.4 FALSE TRUE 2188.090367 2516.376351 2445.703766 2637.083894 2328.503132 2479.990774 2606.404079 2461.192267 2113.629521 2207.764702 0.991088572 1.139784665 1.107773742 1.194458762 1.054688088 1.123303933 1.180562438 1.114789209 0.957361769 1 11.10837071 -8.255140575 23.96843281 0.978680875 1.11733067 0.479359838 0.05599538 207.6468809 790158.0355 0.039025359 0.013907201 5.56E-09 8.255140575 0.138649794 GGYFDEFGIIR ddPTM_A459_MK2206_30min_R2 4 GGYFDEFGIIR 11 0 P11413-3;P11413;P11413-2;E7EUI8;E7EM57 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ;;; 187.22 0.00026702 20090500 73537.8 86641.7 72942.6 85140 84664.1 93113.2 88825.3 71543.8 77160.9 78899.3 FALSE TRUE 79167.91051 82339.19917 75374.46988 78183.78965 81339.76203 96656.68807 77162.43141 80894.82031 83872.21561 76324.8223 1.03724985 1.078799749 0.98754858 1.024356 1.065705226 1.266386022 1.010974269 1.059875646 1.098885174 1 16.21986471 -6.521420335 24.99751665 1.095072453 1.033766994 0.112586909 0.071398708 116.1255329 1990489.89 0.0236105 0.023943075 3.01E-07 6.521420335 -0.06130546 GGYLS(ph)DGDSPELTTK ddPTM_A459_MK2206_30min_R2 1 GGYLSDGDSPELTTK 15 0 Q5VT97-2;Q5VT97 Q5VT97-2 SYDE2 Rho GTPase-activating protein SYDE2 1 GGYLS(0.996)DGDS(0.004)PELTTK 125.28 0.0012431 4105100 33673 34398 35933 36557 40902 31931 36963 31102 32705 34345 TRUE FALSE 36251.03077 32689.84534 37130.98829 33570.17616 39295.98196 33146.15658 32109.7137 35167.13819 35549.62178 33224.32546 1.091099075 0.983912988 1.117584413 1.010409563 1.182747322 0.997647239 0.966451937 1.058475611 1.069987766 1 15.01995229 GGYSEVNQCLS(ph)TTQNK ddPTM_A459_MK2206_30min_R1 1 GGYSEVNQCLSTTQNK 16 0 A0A087WTN2;Q96JC4 A0A087WTN2 ZNF479 Zinc finger protein 479 1 GGYSEVNQCLS(0.333)T(0.333)T(0.333)QNK 56.851 0.044989 7378200 2859.7 3043.3 2698 2330.3 2713.8 2645.1 2880.4 2411.8 2128.4 1976.6 TRUE FALSE 2616.467498 2845.180617 2514.867277 2509.78011 2605.703599 2794.863276 2688.253772 2390.713887 2349.654797 2221.476131 1.177805812 1.280761282 1.132070357 1.129780363 1.172960431 1.258110874 1.210120485 1.076182568 1.057699772 1 11.11730292 -7.873761007 3.771170569 1.038595374 1.194618828 0.680166353 0.047618838 0.148229848 3.917719956 0.031125597 0.013801644 1.34E-08 7.873761007 0.156023454 GHAS(ph)PLPPSAAPTTDSTDSITGQNSR ddPTM_A459_MK2206_30min_R1 2 GHASPLPPSAAPTTDSTDSITGQNSR 26 0 Q96II8-3;Q96II8;Q96II8-2;E9PD99;Q96II8-4 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 GHAS(0.996)PLPPS(0.004)AAPTTDSTDSITGQNSR;GHAS(0.498)PLPPS(0.476)AAPT(0.018)T(0.007)DSTDSITGQNSR 90.799 2.55E-05 4817000 2507.24 2072.8 2304.7 1875.55 2493.93 2158.94 2437.53 2431.1 2174.84 2083.44 TRUE FALSE 2293.986072 1937.860343 2148.263385 2020.005186 2394.591487 2281.177317 2274.926821 2409.845149 2400.922401 2341.552276 0.979686038 0.827596447 0.917452669 0.862677808 1.022651303 0.97421584 0.971546458 1.029165641 1.025355028 1 11.19324953 -6.264717978 24.99411078 1.00218654 0.893377713 0.621182697 0.040875183 182.7577076 1393235.743 0.012010299 0.01419441 5.44E-07 6.264717978 -0.108808827 GHDGGHSHGGDMSNRPVCR ddPTM_A459_MK2206_30min_R2 2 GHDGGHSHGGDMSNRPVCR 19 1 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 0 ; 62.104 0.013793 1465030 598.55 0 595.37 1369.2 1807.2 1027.9 2027.4 624.23 510.24 647.84 FALSE TRUE 644.3754482 0 615.2193386 1257.33198 1736.240248 1067.017455 1761.199945 705.8190043 554.6197529 626.7010339 1.028202306 0 0.981679151 2.006270793 2.770444205 1.702594055 2.810271325 1.126245157 0.884982987 1 9.291633563 -5.606354924 4.254232237 1.84245745 0.505108176 0.360974677 0.673097668 0.209720072 7.077719554 0.191101387 0.348508846 2.48E-06 5.606354924 -1.337349274 GHEDDSYEAR ddPTM_A459_MK2206_30min_R2 1 GHEDDSYEAR 10 0 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 0 123.11 0.0059782 5215900 3068.7 8003.7 2289.6 12050 9450.9 20947 4099.2 7292.9 9475.6 3484.4 FALSE TRUE 3303.642031 7606.247896 2365.934121 11065.47645 9079.810179 21744.15276 3560.970116 8246.10707 10299.77056 3370.704313 0.980104371 2.25657524 0.701910907 3.282838073 2.693742712 6.450922639 1.056446898 2.446404758 3.055673118 1 11.71883436 -5.770596522 24.99661467 2.983566879 1.407234626 0.183877335 1.467633917 312.1568537 852107.9056 0.411435972 0.619999357 1.70E-06 5.770596522 -1.576332252 GHFDYQSLLMR ddPTM_A459_MK2206_30min_R1 1 GHFDYQSLLMR 11 0 Q9H832-2;Q9H832 Q9H832-2 UBE2Z Ubiquitin-conjugating enzyme E2 Z 0 93.561 0.033207 0 3990.1 3483.7 3986.2 3361.4 4486.6 3636.5 4285 3717.2 3376.9 2685.9 FALSE TRUE 3650.721042 3256.910497 3715.62785 3620.29561 4307.889221 3842.395487 3999.155468 3684.700912 3727.940839 3018.64957 1.20938882 1.078929641 1.230890756 1.199309667 1.427091526 1.272885573 1.324816073 1.220645467 1.234969729 1 11.55968757 -5.57381341 2.556852673 1.262847376 1.145639325 0.078555944 0.107688482 0.505348342 6.621357462 0.029434021 0.063540997 2.67E-06 5.57381341 -0.117208051 GHHDDS(ph)DEEASPEK ddPTM_A459_MK2206_30min_R1 1 GHHDDSDEEASPEK 14 0 Q5VT06;H0Y6Q4 Q5VT06 CEP350 Centrosome-associated protein 350 1 GHHDDS(1)DEEASPEK 125.98 0.00088343 2950000 1834.9 1674.4 1334.2 1495.1 1451.2 1287.8 1757.6 1390.9 506.53 1422.7 TRUE FALSE 1678.83212 1565.396256 1243.638221 1610.252861 1393.395631 1360.714123 1640.353711 1378.739508 559.1856061 1598.954817 1.049955947 0.979012189 0.777781966 1.007065893 0.871441529 0.851002235 1.025891222 0.862275465 0.349719454 1 10.64291346 -8.019519486 24.97350694 0.651905586 0.930747281 0.27691252 0.166486672 838.2319441 1072439.636 0.10011481 0.039065177 9.56E-09 8.019519486 0.278841695 GHHDDS(ph)DEEASPEK ddPTM_A459_MK2206_30min_R2 1 GHHDDSDEEASPEK 14 0 Q5VT06;H0Y6Q4 Q5VT06 CEP350 Centrosome-associated protein 350 1 GHHDDS(1)DEEASPEK 115.66 0.0022967 0 17998 25324 18945 27427 30561 28220 32971 18965 20339 22394 TRUE FALSE 19375.94072 24066.44698 19576.61684 25186.12637 29361.02158 29293.93187 28641.86809 21443.79062 22108.04946 21663.28561 0.894413759 1.110932451 0.90367718 1.162618026 1.355335571 1.35223864 1.322138691 0.989867881 1.020530766 1 14.40296445 -5.858868976 6.453815821 1.194941051 0.984803316 0.282911079 0.144259085 0.282904661 15.84251304 0.044045597 0.066042968 1.38E-06 5.858868976 -0.210137735 GHLENNPALEK ddPTM_A459_MK2206_30min_R1 2 GHLENNPALEK 11 0 F8VWS0;P05388-2;Q8NHW5;P05388;F8VWV4;F8VS58;F8VQY6;F8VPE8;F8VRK7;G3V210;F8VW21;F8VZS0;F8VU65 F8VWS0 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like 0 ; 135.99 0.0020409 20160900 19809.8 21332.6 21330 18225 19877 20882.2 21003.1 18820.2 18840.6 17635.1 FALSE TRUE 18124.87248 19943.84386 19882.17903 19628.69266 19085.257 22064.53212 19602.02152 18655.65698 20799.14779 19819.86933 0.914479918 1.006255063 1.0031438 0.990354292 0.962935562 1.113253158 0.989008615 0.941260342 1.049408926 1 14.27465983 -4.761033866 24.6075979 1.005212977 0.914479792 0.274109073 0.044742806 11.10476838 672859.0009 0.011084251 0.063008324 1.73E-05 4.761033866 -0.090733185 GHLENNPALEK ddPTM_A459_MK2206_30min_R2 1 GHLENNPALEK 11 0 F8VWS0;P05388-2;Q8NHW5;P05388;F8VWV4;F8VS58;F8VQY6;F8VPE8;F8VRK7;G3V210;F8VW21;F8VZS0;F8VU65 F8VWS0 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like 0 97.911 0.026372 6689800 50887 58351 64734 69126 64814 60559 63812 54954 62052 67490 FALSE TRUE 54782.94785 55453.37419 66892.19925 63478.18468 62269.0767 62863.61518 55433.40775 62136.67649 67449.1708 65287.80683 0.839099221 0.849368004 1.024574151 0.972282387 0.953762727 0.962869152 0.849062182 0.95173478 1.03310517 1 15.99452596 -5.201112809 9.72801644 0.961826682 0.843761643 0.508472458 0.048496933 0.491469748 76.6193694 0.012927101 0.034299589 6.29E-06 5.201112809 -0.118065039 GHLS(ph)EGLVTK ddPTM_A459_MK2206_30min_R2 1 GHLSEGLVTK 10 0 Q16659 Q16659 MAPK6 Mitogen-activated protein kinase 6 1 GHLS(1)EGLVTK 101.39 0.010855 5154300 34422 41231 38866 37885 47272 45730 46133 37628 37307 45413 TRUE FALSE 37057.37479 39183.5285 40161.77304 34789.67431 45415.86376 47470.28719 40075.68168 42546.1088 40551.89542 43931.17753 0.843532472 0.891929848 0.914197508 0.791913085 1.03379573 1.080560319 0.912237821 0.96847185 0.923077816 1 15.42295755 -6.269308252 24.99912591 0.985785031 0.866489006 0.557200324 0.054902183 505.0210165 1604430.782 0.017815048 0.020565607 5.38E-07 6.269308252 -0.119296025 GHLSRPEAQSLSPYTTS(ph)ANR ddPTM_A459_MK2206_30min_R1 1 GHLSRPEAQSLSPYTTSANR 20 1 O94776;O94776-2 O94776 MTA2 Metastasis-associated protein MTA2 1 GHLSRPEAQS(0.001)LS(0.221)PYT(0.221)T(0.221)S(0.335)ANR 74.308 0.0035887 7123900 1238.1 665.19 950.39 1012.9 1582.4 1518.2 1169.6 1129 665.59 771.19 TRUE FALSE 1132.793093 621.8860101 885.8801747 1090.913734 1519.369657 1604.159172 1091.578118 1119.129272 734.7804623 866.7308394 1.306972179 0.717507653 1.022093751 1.258653418 1.752989034 1.850815846 1.259419959 1.291207398 0.847760838 1 9.759440228 -4.450950345 23.05969692 1.248853064 3.955297186 8.32E-05 0.342792126 10798.32918 3701509.002 0.0917359 105110.1598 3.54E-05 4.450950345 2.706444122 GHLSRPEAQSLSPYTTS(ph)ANR ddPTM_A459_MK2206_30min_R2 1 GHLSRPEAQSLSPYTTSANR 20 1 O94776;O94776-2 O94776 MTA2 Metastasis-associated protein MTA2 1 GHLSRPEAQS(0.006)LS(0.255)PY(0.164)T(0.22)T(0.058)S(0.297)ANR 71.651 0.0052354 6640900 1432.9 6166.2 4143.8 8571.1 8481.5 12858 7909.3 5475.4 6044.2 4221.7 TRUE FALSE 1542.603926 5859.995474 4281.952224 7870.813712 8148.473694 13347.3202 6870.799409 6191.05358 6569.913591 4083.946275 0.377723854 1.434885545 1.048483975 1.927256918 1.995245076 3.268240888 1.682392213 1.515948831 1.608716949 1 11.99574817 -4.909647718 1.036475312 1.918925856 4.18E-05 0.337864566 0.58923864 1.782554357 1.797126767 0.203299721 3.622110758 1.23E-05 4.909647718 -1.918884083 GHNSSNS(ph)PSLQAGGAEGAGDR ddPTM_A459_MK2206_30min_R1 1 GHNSSNSPSLQAGGAEGAGDR 21 0 Q8IWZ3-6;H7C0V5 Q8IWZ3-6 ANKHD1;ANKHD1-EIF4EBP3 Ankyrin repeat and KH domain-containing protein 1 1 GHNS(0.008)S(0.08)NS(0.908)PS(0.004)LQAGGAEGAGDR 84.674 0.0047411 0 453.97 191.62 492.15 360.38 579.4 323.98 475.8 420.16 322.44 267.97 TRUE FALSE 415.3574676 179.1455032 458.7442292 388.13653 556.3212711 342.3234676 444.0602501 416.4865854 355.9587919 301.1681467 1.379154709 0.594835494 1.523216297 1.288770191 1.847211524 1.136652303 1.47445955 1.382903836 1.181927092 1 8.23442538 -4.456585457 23.60496619 1.291680409 4.590823461 0.006382596 0.317916952 7580.81956 2722229.113 0.076363691 11241.50056 3.49E-05 4.456585457 3.299143052 GHPEFSTNR ddPTM_A459_MK2206_30min_R1 3 GHPEFSTNR 9 0 P45974-2;P45974 P45974-2 USP5 Ubiquitin carboxyl-terminal hydrolase 5 0 ;; 138.4 0.0034707 7708300 264.78 318.152 499.26 506.15 498.49 409.17 173.52 508.79 0 232.69 FALSE TRUE 242.2590706 297.440247 465.3716222 545.1337607 478.6340877 432.3368518 161.9447974 504.3417027 0 261.5173939 0.926359302 1.13736315 1.779505429 2.08450288 1.830218941 1.653185837 0.619250578 1.928520681 0 1 8.030763095 -7.243886202 24.22612114 0.964319535 1.593863556 0.268054865 0.544836605 823.3056813 1136291.25 0.209305437 0.1617063 5.70E-08 7.243886202 0.629544021 GHPEFSTNR ddPTM_A459_MK2206_30min_R2 4 GHPEFSTNR 9 0 P45974-2;P45974 P45974-2 USP5 Ubiquitin carboxyl-terminal hydrolase 5 0 ;;; 111.46 0.014419 8517400 1444.6 6914 2985.96 12987.81 6495.01 14951.97 7065.37 5988.8 7968.31 2272 FALSE TRUE 1555.199687 6570.660814 3085.510416 11926.66438 6239.983273 15520.9777 6137.678432 6771.556723 8661.3792 2197.864826 0.707595694 2.98956548 1.403867235 5.426477659 2.839111486 7.061843618 2.79256411 3.080970514 3.940815239 1 11.10188694 -5.740230417 24.98380755 3.883326849 1.829264264 0.242457228 1.628204445 330.0680829 388811.6878 0.422541434 0.730940347 1.82E-06 5.740230417 -2.054062586 GHPHSAS(ph)SPSER ddPTM_A459_MK2206_30min_R2 2 GHPHSASSPSER 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 GHPHSAS(0.483)S(0.483)PS(0.034)ER;GHPHSAS(0.801)S(0.139)PS(0.06)ER 151.3 0.00034807 25806250 22751.4 10116.48 13273.28 16558.7 24197.7 22786.93 23845.5 102350.6 69305.9 32523.9 TRUE FALSE 24493.26468 9614.110314 13715.80453 15205.80124 23247.57671 23654.10259 20714.55721 115728.1748 75334.00191 31462.64781 0.778487075 0.305572194 0.435939296 0.483296935 0.738894478 0.751815382 0.658385694 3.678271948 2.394394851 1 14.94135247 -7.701842582 11.05729117 2.525873072 0.581899525 0.624544186 0.622782286 0.287774788 52.21840302 0.275738881 0.158947351 1.99E-08 7.701842582 -1.943973548 GHPHSASS(ph)PSER ddPTM_A459_MK2206_30min_R2 2 GHPHSASSPSER 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 GHPHS(0.004)AS(0.091)S(0.53)PS(0.375)ER;GHPHS(0.017)AS(0.137)S(0.516)PS(0.33)ER 149.32 0.00038308 45209000 79569 47840 40826 67402 84804 79517 85525 353438 235773 107602 TRUE FALSE 85660.86382 45464.33517 42187.11846 61895.04099 81474.16885 82543.07516 74295.46477 399633.5601 256280.1094 104090.9556 0.822942429 0.436775077 0.405290914 0.594624583 0.782720923 0.792989888 0.713755238 3.839272663 2.462078554 1 16.66748519 -7.696161633 10.7904639 2.611304485 0.638614101 0.604682493 0.656285384 0.265190949 42.48775529 0.290314239 0.167345719 2.01E-08 7.696161633 -1.972690384 GHPHSASSPS(ph)ER ddPTM_A459_MK2206_30min_R2 1 GHPHSASSPSER 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 GHPHS(0.009)AS(0.124)S(0.124)PS(0.743)ER 157.09 0.00029198 19998000 43945 25606 37082 37372 47821 47777 50892 230230 147930 79677 TRUE FALSE 47309.46299 24334.44327 38318.29537 34318.58805 45943.30726 49595.18721 44209.81927 260321.8515 160796.684 77077.14602 0.613793653 0.315715417 0.497142115 0.445249855 0.596069129 0.643448672 0.57357883 3.377419442 2.086178489 1 16.23401553 -7.729875009 20.68049118 2.298840713 0.521246957 0.649052274 0.545525402 14.8339907 9718.894367 0.239112819 0.137994736 1.86E-08 7.729875009 -1.777593756 GHQFSCVCLHGDR ddPTM_A459_MK2206_30min_R1 2 GHQFSCVCLHGDR 13 0 F1T0B3;A0A087X2G1;Q92499-3;Q92499-2;Q92499 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 0 ; 216.83 1.11E-08 15539300 2941.3 2662.89 2674.66 2265.86 2629.56 2827.5 2875.73 3016.4 2117.58 1977.86 FALSE TRUE 2691.12699 2489.535377 2493.111531 2440.37693 2524.819057 2987.590607 2683.895299 2990.027933 2337.710019 2222.892229 1.210642133 1.11995325 1.121562035 1.097838617 1.135826121 1.34401055 1.207388853 1.345107016 1.051652432 1 11.11822229 -6.579669975 24.99999325 1.215378386 1.132820705 0.029589254 0.106867147 175.3600371 77193.54081 0.03333158 0.033331587 2.63E-07 6.579669975 -0.082557681 GHQFSCVCLHGDR ddPTM_A459_MK2206_30min_R2 2 GHQFSCVCLHGDR 13 0 F1T0B3;A0A087X2G1;Q92499-3;Q92499-2;Q92499 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 0 ; 166.62 0.00018457 6468000 6317.5 9082.9 9729.3 10130.6 11853.7 13846.2 10706.9 9052.1 9561.7 9751.9 FALSE TRUE 6801.172657 8631.856394 10053.67001 9302.897574 11388.26418 14373.12684 9301.071169 10235.24055 10393.35938 9433.696302 0.720944627 0.915002574 1.065719065 0.986134944 1.207190036 1.523594399 0.98594134 1.084966086 1.101727154 1 13.20360744 -4.862193444 1.029545871 1.150287609 0.545083448 0.436669949 0.148126885 1.627544206 1.527780555 0.051680612 1.057504607 1.37E-05 4.862193444 -0.60520416 GHQQLYWS(ph)HPR ddPTM_A459_MK2206_30min_R2 1 GHQQLYWSHPR 11 0 A0A2R8Y851;P62273;P62273-2 A0A2R8Y851 RPS29 40S ribosomal protein S29 1 GHQQLYWS(1)HPR 107.17 0.0055785 3223600 2283.1 3609.6 3548.4 6821.2 4268.5 10816 3152.5 4239.9 6780.4 4003.9 TRUE FALSE 2457.895891 3430.352513 3666.701885 6263.88614 4100.897243 11227.61046 2738.572963 4794.069488 7370.146936 3873.253071 0.634581796 0.885651531 0.946672427 1.61721582 1.058773379 2.898754678 0.707047258 1.23773722 1.902831238 1 11.91933005 -5.648691418 3.650881374 1.508279138 0.785584502 0.221433393 0.576028282 0.348262682 8.820743278 0.159013755 0.291400635 2.25E-06 5.648691418 -0.722694636 GHQQLYWSHPR ddPTM_A459_MK2206_30min_R1 2 GHQQLYWSHPR 11 0 A0A2R8Y851;P62273;P62273-2 A0A2R8Y851 RPS29 40S ribosomal protein S29 0 ; 125.74 0.0018571 54857000 5068 4299.9 5150.8 4288.8 5990.2 5473.4 5558.3 5487.7 4060.1 3943.1 FALSE TRUE 4636.939987 4019.975728 4801.178047 4619.124119 5751.59765 5783.299178 5187.515949 5439.721617 4482.161924 4431.600997 1.046335171 0.9071159 1.083395832 1.042314983 1.297859995 1.305013511 1.170573784 1.227484519 1.011409179 1 12.11361228 -6.097784516 6.254268443 1.18685045 1.011205438 0.317852835 0.105482426 0.255190798 13.6331243 0.031286593 0.040764555 7.98E-07 6.097784516 -0.175645012 GHQQLYWSHPR ddPTM_A459_MK2206_30min_R2 2 GHQQLYWSHPR 11 0 A0A2R8Y851;P62273;P62273-2 A0A2R8Y851 RPS29 40S ribosomal protein S29 0 ; 163.84 0.00036294 26391000 53661 67129 62290 74286 69491 73545 81515 65955 58292 56918 FALSE TRUE 57769.32742 63795.47147 64366.71751 68216.59617 66762.43418 76343.80651 70811.98258 74575.54496 63362.13279 55060.77032 1.04919214 1.158637467 1.169012296 1.238932833 1.212522705 1.386537204 1.286069595 1.354422478 1.150767278 1 15.74873717 -4.984861293 0.982758716 1.257930387 0.996447672 0.197252818 0.10431596 1.97234083 1.905051578 0.034300068 0.509669001 1.04E-05 4.984861293 -0.261482715 GHSGTTAS(ph)GGENER ddPTM_A459_MK2206_30min_R2 2 GHSGTTASGGENER 14 0 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 GHSGT(0.009)T(0.167)AS(0.824)GGENER;GHSGT(0.001)T(0.009)AS(0.99)GGENER 123.58 0.0010635 4333000 11100.2 7014.6 9498.3 7264.5 7275.4 5758.5 7270.8 9823 7408.9 11384.8 TRUE FALSE 11950.03985 6666.265164 9814.968581 6670.967112 6989.73124 5977.643753 6316.135226 11106.89983 8053.31273 11013.31491 1.085053859 0.605291433 0.891191132 0.605718366 0.634661889 0.542765171 0.573499921 1.008497434 0.731234219 1 13.42696115 -7.764193329 24.99983 0.902399363 0.695929744 0.231222121 0.17267903 110.3540963 1001733.222 0.088285478 0.045403147 1.72E-08 7.764193329 -0.206469619 GHTAS(ph)ESDEQQWPEEK ddPTM_A459_MK2206_30min_R1 2 GHTASESDEQQWPEEK 16 0 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 GHT(0.001)AS(0.5)ES(0.5)DEQQWPEEK;GHTAS(0.5)ES(0.5)DEQQWPEEK 325.08 5.99E-118 16902500 2961.9 2776.7 2562.5 2310.5 2988.1 2378.9 2481.7 2604.8 2459.3 2453.7 TRUE FALSE 2709.974851 2595.936325 2388.56464 2488.45511 2869.07765 2513.591262 2316.150321 2582.026508 2714.953036 2757.68288 0.982699958 0.941346934 0.866149134 0.902371744 1.040394336 0.911486698 0.839890017 0.936302911 0.984505164 1 11.42924085 -8.272130945 4.05971971 0.995997886 0.925086783 0.193081191 0.053295508 0.367895075 13.91796014 0.049672533 0.0144272 5.34E-09 8.272130945 -0.070911103 GHTAS(ph)ESDEQQWPEEK ddPTM_A459_MK2206_30min_R2 4 GHTASESDEQQWPEEK 16 0 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 GHT(0.027)AS(0.487)ES(0.487)DEQQWPEEK;GHT(0.028)AS(0.957)ES(0.015)DEQQWPEEK;GHT(0.097)AS(0.667)ES(0.236)DEQQWPEEK;GHT(0.008)AS(0.757)ES(0.235)DEQQWPEEK 233.47 1.31E-15 72882500 203612 226695 186364 210648 196749 180584 250034 192611 147469 204694 TRUE FALSE 219200.6913 215437.6559 192577.2827 193437.3846 189023.6457 187456.2507 217204.2355 217785.919 160295.5871 198014.8515 1.106991165 1.087987362 0.972539591 0.976883214 0.954593275 0.946677733 1.096908811 1.099846387 0.809512952 1 17.59524911 -5.217079754 5.717273533 0.987321216 1.099942818 0.261444026 0.077229979 0.29233778 24.42731546 0.01997091 0.053561854 6.07E-06 5.217079754 0.112621602 GHTASES(ph)DEQQWPEEK ddPTM_A459_MK2206_30min_R1 1 GHTASESDEQQWPEEK 16 0 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 GHTAS(0.028)ES(0.972)DEQQWPEEK 233.62 1.24E-15 8316500 1684.3 1767.3 1862.6 1126.9 1776.4 1912.1 1789.9 1562.8 1920.5 1647.5 TRUE FALSE 1541.04144 1652.248449 1736.171902 1213.694033 1705.642226 2020.36145 1670.499037 1549.136604 2120.142848 1851.604738 0.832273438 0.892333237 0.937657949 0.655482246 0.921169725 1.091140786 0.902189869 0.83664541 1.145029932 1 10.85456044 -6.51683004 24.99815833 0.982009108 0.834992733 0.347888128 0.106004901 353.3298948 1460252.185 0.034438526 0.035572491 3.04E-07 6.51683004 -0.147016375 GHTDSVQDISFDHSGK ddPTM_A459_MK2206_30min_R2 1 GHTDSVQDISFDHSGK 16 0 P43034 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha 0 86.548 0.0087032 3169500 13154 21719 13340 16662 17491 17345 20507 13232 15804 16340 FALSE TRUE 14161.08035 20640.46604 13784.74894 15300.6613 16804.21545 18005.07613 17814.40627 14961.46783 17178.60335 15806.82714 0.895883799 1.30579438 0.872075643 0.967978024 1.063098578 1.139069591 1.127007091 0.946519355 1.08678378 1 13.94826019 -4.503751895 21.0202081 1.054188484 0.496362037 0.149214404 0.114926535 33897013.64 829608162.6 0.028038018 640877377.7 3.14E-05 4.503751895 -0.557826447 GHTDT(ph)EGRPPSPPPTS(ph)TPEK ddPTM_A459_MK2206_30min_R2 1 GHTDTEGRPPSPPPTSTPEK 20 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 2 GHT(0.049)DT(0.801)EGRPPS(0.151)PPPT(0.121)S(0.526)T(0.353)PEK 74.287 0.022014 17715000 55962 62245 53984 58095 58426 52988 64461 46219 50525 62860 TRUE FALSE 60246.49375 59154.00381 55783.79962 53348.45266 56131.90167 55004.49547 55997.19327 52259.98199 54919.57317 60808.88335 0.990751522 0.972785563 0.91736267 0.877313473 0.923087197 0.904547041 0.920871922 0.859413611 0.903150496 1 15.89199448 -5.239391347 3.293834928 0.906546383 0.98672391 0.374468735 0.035144037 0.218600361 4.902320208 0.008767993 0.025774319 5.76E-06 5.239391347 0.080177527 GHTDTEGRPPS(ph)PPPTST(ph)PEK ddPTM_A459_MK2206_30min_R1 1 GHTDTEGRPPSPPPTSTPEK 20 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 2 GHT(0.002)DT(0.027)EGRPPS(0.971)PPPT(0.014)S(0.026)T(0.959)PEK 94.955 0.0036508 11206000 2794.5 2887.5 3162.7 2362.7 2246.9 2464.3 2195.1 2356 2456.4 2360.2 TRUE FALSE 2556.8131 2699.523225 2948.024736 2544.675563 2157.401215 2603.826536 2048.668884 2335.40174 2711.75157 2652.599395 0.963889649 1.017689754 1.111372016 0.959313935 0.813315882 0.981613184 0.772325021 0.880420068 1.022299702 1 11.3731911 -5.996566345 24.90827437 0.900768618 1.030602524 0.293842134 0.081763913 111.2264522 806834.2919 0.022622936 0.033370685 1.01E-06 5.996566345 0.129833906 GHTDTEGRPPS(ph)PPPTSTPEK ddPTM_A459_MK2206_30min_R2 3 GHTDTEGRPPSPPPTSTPEK 20 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 1 GHT(0.002)DTEGRPPS(0.998)PPPTSTPEK;GHT(0.008)DT(0.008)EGRPPS(0.976)PPPT(0.005)S(0.003)T(0.001)PEK;GHT(0.192)DT(0.047)EGRPPS(0.747)PPPT(0.009)S(0.003)T(0.001)PEK 74.408 0.002777 238733000 123936 152471 140154 153103 141670 126061 147398 142536 125022 143751 TRUE FALSE 133424.6355 144899.5119 144826.6644 140593.9951 136107.324 130858.3397 128044.4655 161165.9446 135896.1876 139060.4166 0.959472427 1.041989628 1.041465774 1.011028145 0.978763959 0.941017889 0.920782985 1.158963481 0.977245652 1 17.08535229 GHVECLR ddPTM_A459_MK2206_30min_R2 1 GHVECLR 7 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;D6RB27;D6R9G4;D6RBY4;D6REL2;D6R9G6;D6RF74;D6RE17;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 0 102.71 0.026838 1055800 4827.6 6117.1 4355.4 4561.2 5625.1 5638.7 4932.4 4647.2 5729.2 5041.6 FALSE TRUE 5197.204768 5813.333709 4500.606862 4188.535369 5404.23031 5853.28468 4284.769955 5254.604996 6227.51546 4877.093005 1.065635772 1.191966957 0.922805216 0.858818022 1.108084325 1.200158511 0.878549979 1.077405125 1.276890856 1 12.25180577 GHVS(ph)PAEDQTIQAPPVSVSALAR ddPTM_A459_MK2206_30min_R1 2 GHVSPAEDQTIQAPPVSVSALAR 23 0 E9PEM3;H0Y6E6;Q92622-3;Q92622-2;Q92622;H7C357 E9PEM3 KIAA0226 Run domain Beclin-1 interacting and cysteine-rich containing protein 1 GHVS(1)PAEDQTIQAPPVSVSALAR;GHVS(1)PAEDQTIQAPPVSVSALAR 109.71 1.09E-05 9620900 1768.18 1973.2 1714.29 1583.88 1702.15 1568.79 1705.94 1806.22 1588.73 1435.05 TRUE FALSE 1617.787006 1844.744321 1597.928771 1705.870712 1634.349761 1657.613534 1592.139855 1790.428409 1753.884169 1612.834828 1.00307048 1.143789983 0.990757853 1.057684694 1.013339824 1.027763975 0.987168573 1.11011269 1.0874543 1 10.65538298 -10.72311261 3.842302144 0.999968692 1.046883668 0.072320152 0.050276962 35667560.59 17429892.85 13408.16482 0.012341351 1.89E-11 10.72311261 0.046914976 GHVT(ph)PNLSR ddPTM_A459_MK2206_30min_R2 1 GHVTPNLSR 9 0 Q96CP6-2;Q96CP6-3;Q96CP6;M0QZ12 Q96CP6-2 GRAMD1A GRAM domain-containing protein 1A 1 GHVT(1)PNLSR 94.538 0.031423 9563500 15954 11801 12842 10732 10321 12220 25155 8043.4 15200 11965 TRUE FALSE 17175.45051 11214.9795 13270.14587 9855.16127 9915.745681 12685.04066 21852.11828 9094.699997 16522.06852 11574.58303 1.483893671 0.968931621 1.146490188 0.851448492 0.856682755 1.095939321 1.88794 0.785747527 1.42744395 1 13.4986726 -7.022371905 24.97929337 1.29093006 1.042091554 0.092817162 0.315763893 1675.984633 1871311.809 0.116419357 0.090937242 9.50E-08 7.022371905 -0.248838506 GHYAYDCHR ddPTM_A459_MK2206_30min_R1 1 GHYAYDCHR 9 0 Q16629;C9JAB2;Q16629-4;A0A0B4J1Z1;Q16629-3;Q16629-2;F8WEA1 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 0 151.44 0.0017043 3241900 688.62 625.63 693.23 480.22 567.61 680.62 681.74 570.64 258.06 552.81 FALSE TRUE 630.0492529 584.9013733 646.175479 517.2066276 545.0008918 719.1561162 636.2623685 565.6509546 284.8862605 621.2962763 1.014088249 0.941421019 1.040044024 0.832463749 0.877199675 1.157509136 1.024088495 0.910436737 0.458535278 1 9.279137597 -8.018391173 24.42834811 0.714340357 0.980128801 0.314516498 0.148011706 599.0686297 795716.161 0.091633322 0.03609034 9.59E-09 8.018391173 0.265788444 GHYAYDCHR ddPTM_A459_MK2206_30min_R2 4 GHYAYDCHR 9 0 Q16629;C9JAB2;Q16629-4;A0A0B4J1Z1;Q16629-3;Q16629-2;F8WEA1 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 0 ;;; 172.23 0.00071506 9010800 3067.84 4334.57 4668.2 4982.63 5210.42 5851.16 4751.2 4052.88 2325.29 3681.56 FALSE TRUE 3302.716189 4119.321557 4823.835458 4575.53319 5005.832731 6073.829994 4127.361733 4582.605332 2527.539521 3561.430999 0.927356501 1.156647864 1.354465511 1.284745708 1.405567799 1.705446489 1.158905433 1.286731466 0.709697737 1 11.79824132 -8.247954545 23.6323548 0.854848918 1.296846015 0.424568316 0.199921699 316.7860954 555176.5853 0.143355723 0.05339749 5.65E-09 8.247954545 0.441997097 GHYEVT(ph)GSDDETGK ddPTM_A459_MK2206_30min_R2 1 GHYEVTGSDDETGK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHYEVT(0.673)GS(0.287)DDET(0.04)GK 129.17 0.0025135 94711000 67639 42499 51754 44485 42264 28268 54535 42575 32439 57803 TRUE FALSE 72817.49385 40388.56146 53479.45253 40850.4332 40604.503 29343.75855 47374.48899 48139.69868 35260.48558 55916.89284 1.302244995 0.72229624 0.956409589 0.730556208 0.72615807 0.524774483 0.847230355 0.860915123 0.630587355 1 15.77099658 GHYEVT(ph)GSDDETGKLQGSGVSLASK ddPTM_A459_MK2206_30min_R1 3 GHYEVTGSDDETGKLQGSGVSLASK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHY(0.071)EVT(0.325)GS(0.325)DDET(0.277)GKLQGS(0.002)GVSLASK;GHY(0.017)EVT(0.446)GS(0.446)DDET(0.089)GKLQGSGVSLASK;GHY(0.045)EVT(0.49)GS(0.425)DDET(0.039)GKLQGS(0.001)GVSLASK 81.346 0.00024135 29321000 4573.9 4624.1 3828.8 4088.7 4236.9 3574 3981.7 4137.1 3817.9 4572.1 TRUE FALSE 4184.865786 4323.07025 3568.911724 4403.612382 4068.135301 3776.356791 3716.088058 4100.929771 4214.784367 5138.526266 0.81440973 0.841305469 0.69453994 0.856979639 0.791693005 0.734910477 0.72318168 0.798075082 0.820232135 1 12.32713894 -8.828012281 1.944442054 0.999881747 0.780276113 0.640772164 0.048815204 0.89271193 4.805033166 0.047634749 0.013224909 1.49E-09 8.828012281 -0.219605634 GHYEVT(ph)GSDDETGKLQGSGVSLASK ddPTM_A459_MK2206_30min_R2 4 GHYEVTGSDDETGKLQGSGVSLASK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHY(0.071)EVT(0.33)GS(0.293)DDET(0.17)GKLQGS(0.124)GVS(0.012)LAS(0.001)K;GHY(0.008)EVT(0.514)GS(0.45)DDET(0.026)GKLQGSGVS(0.002)LASK;GHY(0.073)EVT(0.461)GS(0.461)DDET(0.004)GKLQGS(0.001)GVSLASK;GHY(0.117)EVT(0.477)GS(0.401)DDET(0.004)GKLQGSGVSLASK 76.807 0.00038117 260243500 70113 85545 73425.7 71110 79934 63199 95300 73498 68141.1 94166 TRUE FALSE 75480.90519 81296.95969 75873.67619 65300.08553 76795.38952 65604.08223 82786.99552 83104.44096 74067.88971 91093.37113 0.828610296 0.892457472 0.832922036 0.716847831 0.843040372 0.72018503 0.908814708 0.912299544 0.813098569 1 16.47505845 -9.105872832 0.551153833 1.005693844 0.815086441 0.39619511 0.064210359 2.254122837 1.14048084 0.106572714 0.030920312 7.84E-10 9.105872832 -0.190607403 GHYEVTGS(ph)DDETGK ddPTM_A459_MK2206_30min_R1 4 GHYEVTGSDDETGK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHYEVTGS(1)DDETGK;GHYEVT(0.002)GS(0.92)DDET(0.079)GK;GHYEVT(0.311)GS(0.652)DDET(0.037)GK;GHYEVTGS(1)DDETGK 222.56 4.80E-09 176910000 23064.5 25409.4 23629.2 20051.9 15434.6 16147.6 23842.4 18935.9 30897.6 39919.6 TRUE FALSE 21102.74316 23755.24344 22025.31574 21596.30081 14819.8072 17061.86316 22251.917 18770.34542 34109.51609 44865.14143 0.470359448 0.529481078 0.490922686 0.481360364 0.330318968 0.380292196 0.495973406 0.41837259 0.76026766 1 15.45330734 -8.471025984 2.804592048 0.998025671 0.449218867 0.905215203 0.058166339 0.072499023 1.249155517 0.061528354 0.016570707 3.38E-09 8.471025984 -0.548806804 down GHYEVTGS(ph)DDETGK ddPTM_A459_MK2206_30min_R2 3 GHYEVTGSDDETGK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHYEVT(0.008)GS(0.945)DDET(0.047)GK;GHYEVT(0.481)GS(0.518)DDET(0.001)GK;GHYEVT(0.002)GS(0.998)DDETGK 204.17 2.69E-05 243568000 274260 158160 205344 166303 150482 120418 244292 187711 124846 245502 TRUE FALSE 295257.5565 150306.0044 212190.0665 152715.5129 144573.3206 125000.5914 212216.167 212245.4722 135704.8794 237491.2898 1.243235306 0.632890598 0.893464626 0.643036269 0.608752096 0.526337583 0.893574527 0.893697922 0.571409922 1 17.85751508 -4.754553026 24.99939645 0.732761044 1.24323618 0.474936604 0.158446117 209.2007454 759390.2795 0.038935492 0.375583063 1.76E-05 4.754553026 0.510475136 GHYEVTGS(ph)DDETGKLQGSGVSLASK ddPTM_A459_MK2206_30min_R1 4 GHYEVTGSDDETGKLQGSGVSLASK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHY(0.041)EVT(0.156)GS(0.622)DDET(0.176)GKLQGS(0.005)GVSLASK;GHY(0.022)EVT(0.172)GS(0.786)DDET(0.02)GKLQGSGVSLASK;GHY(0.003)EVT(0.028)GS(0.967)DDET(0.001)GKLQGSGVSLASK;GHY(0.007)EVT(0.041)GS(0.558)DDET(0.323)GKLQGS(0.032)GVS(0.036)LAS(0.002)K 112.39 7.61E-08 410857600 18025.7 19469.5 19130.7 15646.2 15651.6 15384.7 18107.8 16463.7 17968.6 17525.2 TRUE FALSE 16492.51956 18202.03201 17832.16139 16851.27304 15028.16363 16255.76842 16899.8617 16319.75961 19836.50027 19696.35408 0.837338702 0.924132047 0.905353413 0.855552909 0.762992154 0.825318653 0.858019795 0.828567538 1.007115336 1 14.26564098 -8.265701687 24.99725903 1.003557697 0.850773152 0.684178704 0.041818916 245.3656694 1438972.317 0.040144078 0.011804635 5.42E-09 8.265701687 -0.152784545 GHYEVTGS(ph)DDETGKLQGSGVSLASK ddPTM_A459_MK2206_30min_R2 4 GHYEVTGSDDETGKLQGSGVSLASK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHY(0.001)EVT(0.074)GS(0.918)DDET(0.004)GKLQGS(0.001)GVS(0.002)LASK;GHY(0.004)EVT(0.081)GS(0.904)DDET(0.004)GKLQGS(0.002)GVS(0.006)LASK;GHY(0.006)EVT(0.066)GS(0.926)DDET(0.002)GKLQGSGVSLASK;GHYEVT(0.048)GS(0.952)DDETGKLQGSGVSLASK 98.133 2.37E-06 613040000 612810 621910 651550 646040 642020 475988 786150 607450 567966 754330 TRUE FALSE 659727.2048 591026.8537 673272.3518 593256.4654 616811.0689 494102.0569 682927.5607 686845.8007 617366.656 729716.2739 0.904087285 0.809940623 0.922649495 0.812996073 0.845275199 0.677115304 0.935880951 0.94125049 0.846036574 1 19.4769761 -8.640881308 0.753383879 0.994702523 0.839763911 0.261044041 0.074691123 1.159180201 1.431795684 0.074850086 0.027799409 2.29E-09 8.640881308 -0.154938612 GHYTEGAELVDSVLDVVR ddPTM_A459_MK2206_30min_R1 2 GHYTEGAELVDSVLDVVR 18 0 P68371;P07437;Q5JP53;Q5ST81;A0A0B4J269;Q13509;Q13509-2;G3V2A3;Q9BVA1;Q13885 P68371;P07437;A0A0B4J269;Q9BVA1 TUBB4B;TUBB;TUBB3;TUBB2B;TUBB2A Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 ; 214.54 4.07E-12 85985000 7502 7047.2 6976.1 6065.7 9353.6 8265 9104.5 7576.8 5711.5 5940.1 FALSE TRUE 6863.915505 6588.425999 6502.581769 6532.881265 8981.026305 8732.957158 8497.155417 7510.556836 6305.230864 6676.004433 1.028147236 0.986881609 0.974022985 0.978561553 1.345269674 1.308111348 1.272790559 1.125007766 0.944461755 1 12.7047692 -6.225722422 24.58468215 1.184641669 0.990267414 0.325898452 0.120829944 568.644729 391408.9319 0.037857263 0.048871449 5.95E-07 6.225722422 -0.194374254 GHYTEGAELVDSVLDVVR ddPTM_A459_MK2206_30min_R2 1 GHYTEGAELVDSVLDVVR 18 0 P68371;P07437;Q5JP53;Q5ST81;A0A0B4J269;Q13509;Q13509-2;G3V2A3;Q9BVA1;Q13885 P68371;P07437;A0A0B4J269;Q9BVA1 TUBB4B;TUBB;TUBB3;TUBB2B;TUBB2A Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 160.64 2.48E-05 0 3661.9 4870.3 4035.8 5221.5 4849.1 5627.8 4299.3 2897.6 4292.9 4672.8 FALSE TRUE 3942.25788 4628.447984 4170.351558 4794.886747 4658.699969 5841.969873 3734.796746 3276.326269 4666.288682 4520.326919 0.872117869 1.02391886 0.922577423 1.060738932 1.030611293 1.292377737 0.826222708 0.724798522 1.03229009 1 12.1422114 GHYTIGK ddPTM_A459_MK2206_30min_R1 2 GHYTIGK 7 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;F8VQQ4;F8VS66;F8VRZ4;F8VWV9;P68363;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2 Q9BQE3;P68363;P68366-2 TUBA1C;TUBA1B;TUBA1A;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ; 107.43 0.023463 22749000 32994 20653.5 22569.5 19933 19985.6 25591 39394 35538 0 20424.6 FALSE TRUE 30187.68704 19308.9534 21037.54522 21468.24311 19189.53123 27039.9403 36766.09814 35227.29501 0 22954.95365 1.315083773 0.84116717 0.916470821 0.935233564 0.835964713 1.17795665 1.601662922 1.534627147 0 1 14.4865179 -6.777201245 24.77488585 1.129939407 0.956923962 0 0.429029654 938.2214638 1474709.343 0.151555433 0.13410959 1.67E-07 6.777201245 -0.173015446 GHYTIGK ddPTM_A459_MK2206_30min_R2 1 GHYTIGK 7 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;F8VQQ4;F8VS66;F8VRZ4;F8VWV9;P68363;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2 Q9BQE3;P68363;P68366-2 TUBA1C;TUBA1B;TUBA1A;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 108.24 0.022978 31085000 207250 285570 234600 347130 319360 304550 329660 299290 293630 262920 FALSE TRUE 223117.2193 271389.0091 242421.4469 318768.3686 306820.3217 316139.8637 286375.246 338408.2306 319169.4066 254340.9419 0.877236742 1.067028403 0.95313576 1.253311269 1.20633477 1.242976696 1.125950245 1.33052991 1.254888042 1 17.95640419 -5.759100768 24.99997943 1.214490196 0.975923062 0.562905902 0.094808281 41.6657152 445398.9659 0.024664983 0.040248436 1.74E-06 5.759100768 -0.238567134 GIAPAS(ph)PMLGNASNPNK ddPTM_A459_MK2206_30min_R2 4 GIAPASPMLGNASNPNK 17 0 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YIY6;P27448-6;P27448-7;H0YKP9 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 GIAPAS(1)PMLGNASNPNK;GIAPAS(1)PMLGNASNPNK;GIAPAS(1)PMLGNASNPNK;GIAPAS(1)PMLGNASNPNK 237.46 2.01E-22 64544000 433471 405451 390545 446008 342192 388119 493247 426931 323762 452264 TRUE FALSE 466657.873 385316.8929 403565.5754 409567.7197 328755.8227 402889.1405 428483.0764 482732.3476 351922.2335 437506.6627 1.066630323 0.880710914 0.922421553 0.936140531 0.751430437 0.92087544 0.979374974 1.10337142 0.804381427 1 18.73894546 -7.221688159 5.491988335 0.980531223 0.905184492 0.072893884 0.099091433 0.460296042 37.17276539 0.038504666 0.029007177 6.00E-08 7.221688159 -0.075346732 GIAPAS(ph)PMLGNASNPNKADIPER ddPTM_A459_MK2206_30min_R1 4 GIAPASPMLGNASNPNKADIPER 23 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YIY6;P27448-6;P27448-7;H0YKP9 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 GIAPAS(1)PMLGNASNPNKADIPER;GIAPAS(0.999)PMLGNAS(0.001)NPNKADIPER;GIAPAS(1)PMLGNASNPNKADIPER;GIAPAS(0.998)PMLGNAS(0.002)NPNKADIPER 127.37 5.08E-06 43331200 8663.4 8048.2 7490.58 7061.64 9074.8 8760.6 8070.6 7932.1 5912.62 4273.64 TRUE FALSE 7926.532337 7524.260717 6982.1403 7605.528736 8713.3315 9256.617601 7532.225 7862.750486 6527.258008 4803.090788 1.650298253 1.566545595 1.45367652 1.583465538 1.814109265 1.927221036 1.568203753 1.637018918 1.358970358 1 12.22974736 -8.557734437 1.909390592 1.000677664 1.655112082 0.722274494 0.126843507 0.222561382 1.84032868 0.136649093 0.038432427 2.77E-09 8.557734437 0.654434419 GIAPAS(ph)PMLGNASNPNKADIPER ddPTM_A459_MK2206_30min_R2 3 GIAPASPMLGNASNPNKADIPER 23 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YIY6;P27448-6;P27448-7;H0YKP9 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 GIAPAS(1)PMLGNASNPNKADIPER;GIAPAS(1)PMLGNASNPNKADIPER;GIAPAS(0.999)PMLGNAS(0.001)NPNKADIPER 115.38 5.97E-06 61126000 95448 153157 120204 143406 156768 161892 138244 118381 144034 122515 TRUE FALSE 102755.5723 145551.4461 124211.5414 131689.2711 150612.5006 168052.9135 120092.3967 133853.8032 156561.817 118517.3456 0.867008721 1.22810248 1.048045252 1.111139221 1.270805551 1.417960491 1.013289626 1.129402641 1.321003404 1 16.85473869 -4.755423884 24.97144497 1.17530903 0.867008211 0.326378683 0.130926741 239.1283503 992567.7249 0.032785065 0.291315266 1.76E-05 4.755423884 -0.308300819 GIAPASPMLGNAS(ph)NPNKADIPER ddPTM_A459_MK2206_30min_R1 1 GIAPASPMLGNASNPNKADIPER 23 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YIY6;P27448-6;P27448-7;H0YKP9 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 GIAPAS(0.403)PMLGNAS(0.597)NPNKADIPER 67.312 0.0019985 24457000 2251.1 2264.8 2483.6 1983 2640.7 2435.9 2463.2 2535.4 1892.9 1688.5 TRUE FALSE 2059.632124 2117.361108 2315.020152 2135.731004 2535.515327 2573.818553 2298.884422 2513.233265 2089.673729 1897.684128 1.085339807 1.115760562 1.219918593 1.125440727 1.33611031 1.356294504 1.21141574 1.324368597 1.101170473 1 10.89002416 -5.243974416 1.29416022 1.23599862 1.068874666 0.113016329 0.108603707 1.182935013 2.935851861 0.033062433 0.210163335 5.70E-06 5.243974416 -0.167123954 GIASTSDPPTANIKPTPVVS(ph)TPSK ddPTM_A459_MK2206_30min_R2 2 GIASTSDPPTANIKPTPVVSTPSK 24 1 P12270 P12270 TPR Nucleoprotein TPR 1 GIASTSDPPTANIKPTPVVS(0.487)T(0.487)PS(0.027)K;GIASTSDPPTANIKPT(0.155)PVVS(0.355)T(0.355)PS(0.136)K 102.69 1.55E-06 76966000 226849 200027 218486 214404 209935 163309 236069 179807 145539 197962 TRUE FALSE 244216.7339 190093.95 225770.2142 196886.5074 201691.8971 169523.8384 205072.8567 203308.3923 158197.7191 191502.5162 1.27526645 0.99264466 1.178941242 1.028114467 1.053207556 0.885230345 1.070862466 1.061648674 0.826086896 1 17.54700382 -1.522878746 0.3710984 0.968903556 4.291870696 0.423827053 0.092924776 68.76078786 0.94879502 0.071311262 163.033486 0.03 1.522878746 3.32296714 GIASTSDPPTANIKPTPVVST(ph)PSK ddPTM_A459_MK2206_30min_R1 2 GIASTSDPPTANIKPTPVVSTPSK 24 1 P12270 P12270 TPR Nucleoprotein TPR 1 GIASTSDPPTANIKPT(0.014)PVVS(0.17)T(0.646)PS(0.17)K;GIASTSDPPTANIKPT(0.007)PVVS(0.224)T(0.72)PS(0.048)K 102.46 4.30E-06 46477000 20079.3 19463.5 17661.1 13848.1 14318.6 15427.1 14941.9 13787.3 17652.6 17500.5 TRUE FALSE 18371.45009 18196.42261 16462.31374 14914.68306 13748.25984 16300.56907 13945.15311 13666.75909 19487.65094 19668.59406 0.93404999 0.92515116 0.836984773 0.758299399 0.698995556 0.828761274 0.709006097 0.694851856 0.990800404 1 14.26360622 -5.370283072 3.075006672 0.790807824 0.93263252 0.143007693 0.10526735 0.3845335 6.847210266 0.027564462 0.068657377 4.26E-06 5.370283072 0.141824696 GIAYIEFK ddPTM_A459_MK2206_30min_R2 1 GIAYIEFK 8 0 P19338;H7BY16 P19338 NCL Nucleolin 0 137.18 0.035287 3009800 19290 24440 20390 26762 23190 24960 27526 20792 20479 25773 FALSE TRUE 20766.85723 23226.34514 21069.79242 24575.45899 22279.44408 25909.87029 23911.80314 23509.58579 22260.2264 24932.02912 0.832938913 0.931586636 0.845089356 0.985698311 0.893607334 1.03922028 0.959079705 0.942947149 0.892836531 1 14.60571268 -5.762529343 24.9994239 0.957292602 0.876043131 0.411800351 0.048645181 30.12026089 690868.7139 0.013157815 0.020833146 1.73E-06 5.762529343 -0.081249471 GICDYFPSPS(ph)K ddPTM_A459_MK2206_30min_R2 1 GICDYFPSPSK 11 0 Q86XL3;Q86XL3-2 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 GICDYFPS(0.311)PS(0.689)K 109.72 0.0092334 3241600 39248 27158 24444 22499 26007 22234 37560 18032 19252 28173 TRUE FALSE 42252.85706 25809.37321 25258.95076 20660.75973 24985.83451 23080.13045 32628.32688 20388.84431 20926.50416 27253.71732 1.55035207 0.947003776 0.926807542 0.758089603 0.916786294 0.846861739 1.197206477 0.748112416 0.767840362 1 14.7341654 -4.756360924 4.221078877 0.893331468 1.61871006 0.701190745 0.127561754 0.131615815 4.665646068 0.032152828 0.298835214 1.75E-05 4.756360924 0.725378593 GIEFEDESS(ph)DRDARPALETQPQQEK ddPTM_A459_MK2206_30min_R2 2 GIEFEDESSDRDARPALETQPQQEK 25 2 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 GIEFEDES(0.479)S(0.521)DRDARPALETQPQQEK;GIEFEDES(0.44)S(0.493)DRDARPALET(0.067)QPQQEK 55.046 0.015225 18537400 42128 50961 44620 53529 47257 45027 49986 40041 38268 44640 TRUE FALSE 45353.35207 48430.35084 46107.60853 49155.50947 45401.45273 46740.53404 43422.77816 45274.49618 41596.48147 43183.40046 1.05024967 1.121503873 1.067716022 1.138296404 1.051363539 1.082372707 1.00554328 1.0484236 0.963251644 1 15.39818923 -7.35909438 1.031665459 0.991955855 1.09315211 0.603822716 0.032214387 0.349021877 0.707436381 0.022573481 0.011865846 4.37E-08 7.35909438 0.101196255 GIEGHS(ph)PGNLPK ddPTM_A459_MK2206_30min_R2 1 GIEGHSPGNLPK 12 0 H0YAP0;Q96GY0 H0YAP0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A 1 GIEGHS(1)PGNLPK 114.7 0.0056461 0 16221 20260 15172 21988 15129 14296 21379 18591 12050 17336 TRUE FALSE 17462.89223 19253.91786 15677.82691 20191.51006 14534.95944 14840.0443 18571.91162 21020.90753 13098.08722 16770.32774 1.041297016 1.14809431 0.934855129 1.204002115 0.86670694 0.884898884 1.107426874 1.253458362 0.781027504 1 14.03362326 -6.260625802 24.99894572 0.996316996 1.076263929 0.102984536 0.140263599 230.3688525 7078607.929 0.043072944 0.052449177 5.49E-07 6.260625802 0.079946933 GIEYSRVS(ph)PQPMISR ddPTM_A459_MK2206_30min_R1 1 GIEYSRVSPQPMISR 15 1 Q9P270;D6RIF6 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 GIEY(0.001)S(0.01)RVS(0.989)PQPMISR 61.957 0.042807 8688400 6075.5 4520.5 4588.5 5593.4 5306.7 5245.4 4213.8 4267.3 3101.7 2450.8 TRUE FALSE 5558.746821 4226.214628 4277.045404 6024.204637 5095.322902 5542.390015 3932.705091 4229.991446 3424.132815 2754.423607 2.018116171 1.534337209 1.552791442 2.187101731 1.849869021 2.012177793 1.427777877 1.535708391 1.243139511 1 11.42753474 -8.05385485 1.047714593 1.028533888 1.837668041 0.646419595 0.211613839 0.336774979 0.69423947 0.204075398 0.072883874 8.83E-09 8.05385485 0.809134153 GIGLDES(ph)ELDSEAELMR ddPTM_A459_MK2206_30min_R1 1 GIGLDESELDSEAELMR 17 0 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 GIGLDES(0.872)ELDS(0.128)EAELMR 97.823 0.0094134 0 200.5 344.36 218.88 234.03 375.08 227.39 327.46 335.5 207.11 267.93 TRUE FALSE 183.4464221 321.9421014 204.0230354 252.0550312 360.1397694 240.2646253 305.6157409 332.5667589 228.6398257 301.1231912 0.60920722 1.069137519 0.677540095 0.837049548 1.195988153 0.79789479 1.014919308 1.104420943 0.759289993 1 8.234210012 -6.025985817 24.65911592 0.980355118 0.804281768 0.226694617 0.164285788 952.6659386 904026.9636 0.045751573 0.059302464 9.42E-07 6.025985817 -0.17607335 GIGLDESELDS(ph)EAELMR ddPTM_A459_MK2206_30min_R1 1 GIGLDESELDSEAELMR 17 0 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 GIGLDESELDS(1)EAELMR 105.14 0.01019 2234400 1436.4 1342.7 1324.7 840.84 1409.3 1498.9 1238.2 1226.5 1014.7 776.55 TRUE FALSE 1314.226637 1255.289986 1234.783055 905.6016425 1353.164597 1583.766423 1155.601937 1215.77684 1120.181696 872.7548767 1.50583706 1.438307616 1.414810834 1.037635729 1.55045206 1.814674962 1.32408534 1.393033568 1.28350093 1 9.769432703 -8.663281823 1.409308047 1.001447672 1.439942952 0.351724089 0.182278924 0.753422076 3.065128862 0.18545412 0.054976565 2.17E-09 8.663281823 0.438495279 GIGT(ph)PPNTTPIK ddPTM_A459_MK2206_30min_R1 2 GIGTPPNTTPIK 12 0 O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7;O96028-5 O96028-3;O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GIGT(0.947)PPNT(0.051)T(0.002)PIK;GIGT(0.971)PPNT(0.025)T(0.004)PIK 121.04 0.0090834 20245000 6735.1 6497.2 6051.5 5880.4 6408.6 6464.8 6397.5 4602.6 4871.7 5087.8 TRUE FALSE 6162.244378 6074.231099 5640.74104 6333.309427 6153.331892 6830.831389 5970.734448 4562.359953 5378.130649 5718.115075 1.077670578 1.062278569 0.986468612 1.107586914 1.076111937 1.19459495 1.044178784 0.797878303 0.94054257 1 12.48132394 -7.60366815 7.39500474 0.903277 1.08262999 0.566879974 0.066926146 0.159234611 12.36537952 0.031645522 0.018154002 2.49E-08 7.60366815 0.17935299 GIGTPPNTTPIKNGS(ph)PEIK ddPTM_A459_MK2206_30min_R2 1 GIGTPPNTTPIKNGSPEIK 19 1 O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7;O96028-5 O96028-3;O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GIGT(0.001)PPNT(0.058)T(0.041)PIKNGS(0.9)PEIK 73.168 0.0063791 7666600 18823 46171 32626 39894 43296 31388 53306 36800 44963 41080 TRUE FALSE 20264.10335 43878.21528 33713.73456 36634.53259 41595.9815 32582.49233 46306.85817 41609.88635 48873.80047 39739.56296 0.509922652 1.104144384 0.848367019 0.921865513 1.046714619 0.819900621 1.165258365 1.047064518 1.22985249 1 15.27828839 -4.755028585 24.99964669 1.012458548 0.509921814 0.603399856 0.123996864 154.065553 600740.806 0.031121012 0.287052648 1.76E-05 4.755028585 -0.502536733 GIHNFRASGDYDNDCT(ph)NPITPLCTQPDQVIK ddPTM_A459_MK2206_30min_R1 1 GIHNFRASGDYDNDCTNPITPLCTQPDQVIK 31 1 Q8TAF3-4;Q8TAF3-3;Q8TAF3 Q8TAF3-4 WDR48 WD repeat-containing protein 48 1 GIHNFRAS(0.312)GDY(0.286)DNDCT(0.372)NPIT(0.028)PLCT(0.003)QPDQVIK 45.511 0.016872 8751000 641.24 685.68 755.38 762.94 930.26 737.81 634.9 673.64 446.02 217.42 TRUE FALSE 586.6991707 641.0421074 704.1069102 821.701771 893.2057743 779.5841646 592.5469794 667.7504365 492.3853751 244.355631 2.401005323 2.623398138 2.881484283 3.362729017 3.655351712 3.190367094 2.424936871 2.732699196 2.015035925 1 7.932838541 -8.537740159 1.056120854 1.004043039 3.003106049 0.73464029 0.368080227 0.323453241 0.79090996 0.395624157 0.128927503 2.90E-09 8.537740159 1.99906301 GIIS(ph)RLMSVEEELK ddPTM_A459_MK2206_30min_R1 1 GIISRLMSVEEELK 14 1 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 GIIS(1)RLMSVEEELK 76.357 0.01815 10268000 3927.6 4528.4 4424.1 4136.7 4279.4 4171.4 4532.8 4156.9 3256.3 3052.2 TRUE FALSE 3593.536995 4233.600337 4123.804418 4455.309351 4108.942436 4407.581063 4230.425183 4120.556662 3594.804038 3430.329579 1.047577766 1.234167225 1.202159828 1.298799211 1.197827305 1.284885595 1.233241613 1.201213052 1.04794713 1 11.74413148 -8.31069775 3.008816132 1.002386095 1.220085407 0.582701897 0.064353704 0.171742929 2.905659653 0.059269128 0.016486859 4.89E-09 8.31069775 0.217699312 GIITDS(ph)FGR ddPTM_A459_MK2206_30min_R1 3 GIITDSFGR 9 0 C9JUH3;A0A0A0MT72;Q9BSQ5-3;Q9BSQ5-4;Q9BSQ5;Q9BSQ5-2 C9JUH3 CCM2 Cerebral cavernous malformations 2 protein 1 GIIT(0.006)DS(0.994)FGR;GIIT(0.016)DS(0.984)FGR;GIIT(0.011)DS(0.989)FGR 99.788 0.018495 39324300 8027.8 8950.8 8294.7 7137.9 8753.6 8710.2 8517.4 8312.9 7215.3 7122.6 TRUE FALSE 7344.993454 8368.101293 7731.678874 7687.662295 8404.925576 9203.363997 7949.219787 8240.221192 7965.356255 8005.001461 0.917550545 1.045359121 0.965856023 0.960357388 1.049959281 1.149701726 0.993031647 1.029384096 0.995047446 1 12.96668595 -4.753665625 24.97280394 1.022324387 0.917550354 0.264653045 0.051670277 421.8149642 1354948.702 0.013700389 0.144634276 1.76E-05 4.753665625 -0.104774033 GIITDS(ph)FGR ddPTM_A459_MK2206_30min_R2 2 GIITDSFGR 9 0 C9JUH3;A0A0A0MT72;Q9BSQ5-3;Q9BSQ5-4;Q9BSQ5;Q9BSQ5-2 C9JUH3 CCM2 Cerebral cavernous malformations 2 protein 1 GIIT(0.001)DS(0.999)FGR;GIIT(0.21)DS(0.79)FGR 82.029 0.042377 22020200 79377 102228 80919 95884 83475 97886 88614 72725 77375 90635 TRUE FALSE 85454.16415 97151.50617 83616.79907 88049.97048 80197.35207 101611.1203 76978.87536 82230.4072 84104.93764 87677.58737 0.974640917 1.108054054 0.95368499 1.004247187 0.91468475 1.158917842 0.87797666 0.937872604 0.959252417 1 16.41992048 GILAADES(ph)TGSIAK ddPTM_A459_MK2206_30min_R1 5 GILAADESTGSIAK 14 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 GILAADES(0.849)T(0.079)GS(0.072)IAK;GILAADES(0.478)T(0.478)GS(0.045)IAK;GILAADES(0.845)T(0.058)GS(0.097)IAK;GILAADES(0.927)T(0.073)GSIAK;GILAADES(0.988)T(0.011)GS(0.001)IAK 267.77 3.42E-44 75563500 19569.8 20016.5 19359.6 16440.2 17507.2 17194.4 18177.6 16378.8 18239.1 15919.9 TRUE FALSE 17905.28574 18713.42221 18045.52429 17706.42705 16809.85115 18167.93207 16965.00547 16235.60188 20135.11971 17892.1774 1.00073263 1.045899657 1.008570611 0.989618349 0.939508411 1.015412024 0.948180039 0.90741342 1.125358824 1 14.12704135 -5.669916584 3.413951243 0.982592265 1.023906589 0.047845227 0.056156747 0.603247174 13.76111518 0.015321342 0.028056707 2.14E-06 5.669916584 0.041314324 GILAADES(ph)TGSIAK ddPTM_A459_MK2206_30min_R2 4 GILAADESTGSIAK 14 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 GILAADES(0.787)T(0.174)GS(0.039)IAK;GILAADES(0.959)T(0.03)GS(0.011)IAK;GILAADES(0.768)T(0.227)GS(0.005)IAK;GILAADES(0.981)T(0.019)GSIAK 178.67 7.18E-05 40308100 182047 200652 177629 200235 194718 175003 218228 189328 165041 169240 TRUE FALSE 195984.6583 190687.9135 183551.0622 183875.16 187072.3929 181662.8618 189574.4015 214073.8197 179395.9679 163717.7127 1.197088911 1.164735998 1.121143578 1.123123192 1.142652129 1.109610309 1.157934584 1.307578857 1.095763952 1 17.32085089 -4.908660338 3.595300395 1.143290103 1.197130339 0.05959124 0.072156315 0.869449074 20.01091402 0.018084975 0.102871085 1.23E-05 4.908660338 0.053840237 GILAADEST(ph)GSIAK ddPTM_A459_MK2206_30min_R2 4 GILAADESTGSIAK 14 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 GILAADES(0.143)T(0.459)GS(0.398)IAK;GILAADES(0.264)T(0.479)GS(0.257)IAK;GILAADES(0.262)T(0.737)GS(0.001)IAK;GILAADES(0.224)T(0.753)GS(0.023)IAK 227.92 8.49E-13 55619100 172356 169373 154134 173636 158794 116538 209080 156466 114881 147444 TRUE FALSE 185551.7079 160962.1831 159272.7506 159449.3834 152558.9497 120972.9353 181627.5448 176916.6434 124873.1417 142632.9144 1.300903853 1.128506585 1.116661966 1.117900339 1.069591478 0.84814179 1.273391529 1.240363378 0.875486155 1 17.12194741 -1.522883029 0.88694573 1.070904812 105.2212366 0.235301356 0.128585474 1365.761943 3.196748862 0.043811403 287706.4433 0.029999704 1.522883029 104.1503318 GILAADESTGS(ph)IAK ddPTM_A459_MK2206_30min_R1 2 GILAADESTGSIAK 14 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 GILAADEST(0.015)GS(0.984)IAK;GILAADEST(0.022)GS(0.978)IAK 226.19 4.40E-13 24119000 6922.4 7081.9 6768.8 5388 5729.6 5682.4 6312.8 5010.9 5833.1 5469.9 TRUE FALSE 6333.613529 6620.867023 6309.352715 5802.984694 5501.377899 6004.132577 5891.68463 4967.09023 6439.471619 6147.552508 1.030265869 1.07699235 1.026319451 0.943950407 0.894889127 0.976670402 0.958378903 0.807978496 1.04748542 1 12.58579644 -5.698297656 3.707007235 0.938015968 1.053055246 0.345219134 0.061364808 0.220773324 6.057028849 0.016500168 0.029340193 2.00E-06 5.698297656 0.115039278 GILAADESTGS(ph)IAKR ddPTM_A459_MK2206_30min_R1 2 GILAADESTGSIAKR 15 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 GILAADES(0.006)T(0.02)GS(0.974)IAKR;GILAADES(0.003)T(0.001)GS(0.996)IAKR 159.41 0.00024746 6716600 4864.9 5478.5 5772.1 4828 5547.6 5161.8 4923.5 5351.1 4027.6 3086.5 TRUE FALSE 4451.114708 5121.848654 5380.305934 5199.853397 5326.627345 5454.056655 4595.062298 5304.315897 4446.283433 3468.878922 1.28315655 1.476514104 1.551021542 1.499001122 1.535547208 1.572282221 1.324653412 1.529115318 1.281763801 1 11.76025377 -8.577260145 2.815076446 1.000214692 1.475773178 0.719717844 0.091117527 0.156841531 3.080968765 0.087452508 0.023426119 2.65E-09 8.577260145 0.475558486 GILAADESTGS(ph)IAKR ddPTM_A459_MK2206_30min_R2 3 GILAADESTGSIAKR 15 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 GILAADES(0.217)T(0.17)GS(0.612)IAKR;GILAADES(0.004)T(0.071)GS(0.924)IAKR;GILAADES(0.155)T(0.155)GS(0.691)IAKR 109.67 0.0018943 53071300 251361 317875 306613 363568 352925 291813 367826 314127 289647 332425 TRUE FALSE 270605.3914 302089.7897 316835.3244 333863.3314 339067.3912 302918.1482 319530.0044 355184.4775 314839.9725 321577.9995 0.841492241 0.939398187 0.985251867 1.038203272 1.054386157 0.941974105 0.99363142 1.104504904 0.97904699 1 18.29480918 -4.820849793 1.456646519 1.017548553 0.780081412 0.618147816 0.042232566 0.730537509 1.51353123 0.012503187 0.249212414 1.51E-05 4.820849793 -0.237467141 GILAADESTGSIAK ddPTM_A459_MK2206_30min_R1 1 GILAADESTGSIAK 14 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 170.52 3.30E-06 0 949.97 785.21 808.25 643.9 924.47 783.46 606.96 617.67 738.84 691.03 FALSE TRUE 869.170063 734.0926863 753.3882419 693.4932896 887.6464023 827.8188281 566.4708059 612.2697763 815.645062 776.6400134 1.119141492 0.945216154 0.970061069 0.892940458 1.142931586 1.065897731 0.729386583 0.788357239 1.050222816 1 9.601102228 -7.233129543 24.98596943 0.874354708 1.016350674 0.237875935 0.11251853 990.9013091 874560.5141 0.043733721 0.033868781 5.85E-08 7.233129543 0.141995967 GILAADESTGSIAK ddPTM_A459_MK2206_30min_R2 1 GILAADESTGSIAK 14 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 127.87 0.016358 3149300 27430 42325 39047 35606 35697 34708 31924 29531 32214 28859 FALSE TRUE 29530.06189 40223.20205 40348.80749 32696.8759 34295.35642 36028.83726 27732.34045 33390.8031 35015.91549 27917.33319 1.057768007 1.440796718 1.44529591 1.171203412 1.228461049 1.290554403 0.993373553 1.196059912 1.254271504 1 14.76887351 -6.705297329 1.161670524 1.132417899 1.306749817 0.207087557 0.136001811 0.761793338 2.18055527 0.069284777 0.065987871 1.97E-07 6.705297329 0.174331919 GILFVGS(ph)GVSGGEEGAR ddPTM_A459_MK2206_30min_R2 1 GILFVGSGVSGGEEGAR 17 0 P52209-2;P52209;K7EM49;K7EMN2;K7EPF6 P52209-2 PGD "6-phosphogluconate dehydrogenase, decarboxylating" 1 GILFVGS(0.794)GVS(0.206)GGEEGAR 75.998 0.021479 2519100 7858 11986 10363 9787.3 9237.8 10551 9751.2 9306.9 9623.8 10362 TRUE FALSE 8459.614522 11390.79267 10708.49725 8987.646282 8875.077556 10952.5257 8470.855727 10523.34379 10460.86073 10023.88879 0.843945369 1.136364629 1.068297691 0.896622705 0.88539266 1.09264238 0.84506681 1.04982647 1.043593055 1 13.29115469 -9.997550943 6.443629817 1 0.987043196 0.001505674 0.103117882 0 0 0.097957902 0.023758281 1.01E-10 9.997550943 -0.012956804 GILFVGSGVS(ph)GGEEGAR ddPTM_A459_MK2206_30min_R1 2 GILFVGSGVSGGEEGAR 17 0 P52209-2;P52209;K7EM49;K7EMN2;K7EPF6 P52209-2 PGD "6-phosphogluconate dehydrogenase, decarboxylating" 1 GILFVGS(0.238)GVS(0.762)GGEEGAR;GILFVGS(0.001)GVS(0.999)GGEEGAR 160.03 7.65E-05 4117000 1722.98 1793.93 2096.9 1824.54 2284.19 1928.5 2309 1864.99 1727.44 1834.55 TRUE FALSE 1576.431503 1677.144831 1954.56827 1965.066387 2193.205875 2037.690003 2154.970823 1848.684589 1907.01357 2061.827904 0.764579575 0.813426197 0.947978377 0.953070032 1.063719174 0.98829296 1.045174924 0.8966241 0.924914037 1 11.0097082 -5.224783652 1.964724286 0.984011412 0.758284074 0.72573996 0.047259744 0.215736323 1.465286797 0.014300094 0.062592136 5.96E-06 5.224783652 -0.225727338 GILFVGSGVS(ph)GGEEGAR ddPTM_A459_MK2206_30min_R2 1 GILFVGSGVSGGEEGAR 17 0 P52209-2;P52209;K7EM49;K7EMN2;K7EPF6 P52209-2 PGD "6-phosphogluconate dehydrogenase, decarboxylating" 1 GILFVGS(0.137)GVS(0.863)GGEEGAR 119.04 0.0015207 1577700 8740.7 10498 7704.5 9344.7 9234.7 9556.6 8040.1 5837.7 8838 10062 TRUE FALSE 9409.894712 9976.684586 7961.364185 8581.208118 8872.099277 9920.28311 6984.425212 6600.707434 9606.713265 9733.677764 0.966735795 1.024965571 0.817919432 0.881599774 0.911484795 1.019171104 0.717552541 0.678130877 0.986956164 1 13.2487693 -7.257108951 24.97443871 0.81883747 0.931890859 0.119963608 0.111611268 637.8852666 3678822.754 0.04369118 0.032649672 5.53E-08 7.257108951 0.113053389 GILHLS(ph)PDVYQEMEASR ddPTM_A459_MK2206_30min_R1 2 GILHLSPDVYQEMEASR 17 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 GILHLS(1)PDVYQEMEASR;GILHLS(1)PDVYQEMEASR 172.09 4.02E-07 16719700 7853.8 6891 6749.7 5772.4 7473 7382.6 7740.9 6361.7 6307.7 5264.8 TRUE FALSE 7185.793068 6442.394648 6291.54917 6216.991248 7175.334586 7800.596432 7224.518685 6306.080328 6963.407987 5917.043171 1.214422958 1.088786149 1.063292761 1.050692224 1.212655439 1.318326773 1.220967716 1.065748575 1.176839138 1 12.53066071 -4.133848517 5.375903153 1.141717849 10.20894266 0.057122901 0.093194097 5389.121292 914.8907444 0.025041349 592644.5727 7.35E-05 4.133848517 9.067224815 GILHLS(ph)PDVYQEMEASR ddPTM_A459_MK2206_30min_R2 2 GILHLSPDVYQEMEASR 17 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 GILHLS(1)PDVYQEMEASR;GILHLS(1)PDVYQEMEASR 141.18 0.00033207 6699900 39506 45260 34912 44788 40766 46310 45809 36777 36337 41774 TRUE FALSE 42530.60973 43012.45421 36075.94866 41128.67713 39165.32201 48072.3595 39794.22327 41583.88017 39497.52658 40410.9178 1.052453447 1.064377068 0.892727773 1.01776152 0.969176751 1.189588411 0.984739408 1.029025878 0.977397415 1 15.3024575 GILHTDSQSQS(ph)LR ddPTM_A459_MK2206_30min_R2 2 GILHTDSQSQSLR 13 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 GILHTDS(0.001)QS(0.036)QS(0.963)LR;GILHTDSQS(0.012)QS(0.988)LR 108.14 0.0042196 23953000 105373 152005 156632 182882 205157 215042 216032 149111 217707 167038 TRUE FALSE 113440.4379 144456.6527 161854.0327 167939.9556 197101.5053 223225.574 187666.7389 168600.3197 236642.7613 161587.5637 0.702036934 0.893983729 1.001649069 1.039312381 1.219781404 1.381452686 1.161393455 1.043399107 1.464486226 1 17.30195664 -5.269170433 0.920716489 1.21834263 0.639188274 0.597736422 0.135541605 0.790324612 0.86483661 0.049958689 0.394647165 5.38E-06 5.269170433 -0.579154356 GILLEDGSES(ph)PAKR ddPTM_A459_MK2206_30min_R1 3 GILLEDGSESPAKR 14 1 Q08999;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 GILLEDGS(0.223)ES(0.777)PAKR;GILLEDGS(0.204)ES(0.796)PAKR;GILLEDGS(0.065)ES(0.935)PAKR 97.073 0.0058274 26732800 6923.7 7786.5 8132.7 6863.7 6762.9 6694.9 7091.7 7352 7341.8 6682 TRUE FALSE 6334.802957 7279.597435 7580.674983 7392.343363 6493.519372 7073.959452 6618.625633 7287.722239 8105.006383 7509.816607 0.843536306 0.969344235 1.009435434 0.984357375 0.864670832 0.941961678 0.881329862 0.970426126 1.079254902 1 12.87456196 -8.044997181 6.093983799 1.036582946 0.932279471 0.408155149 0.053250041 0.225960325 21.21768075 0.036872228 0.014097042 9.02E-09 8.044997181 -0.104303476 GILQVLPDEITFPLS(ph)PLRK ddPTM_A459_MK2206_30min_R1 1 GILQVLPDEITFPLSPLRK 19 1 A0A0U1RR07;A0A0U1RRJ3;A0A0U1RQP0;Q9HCH5-11;Q9HCH5-7;Q9HCH5-8 A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 GILQVLPDEIT(0.012)FPLS(0.988)PLRK 110.91 0.00032647 1549800 373.91 333.21 496.48 324.41 465.38 373.45 239.05 286.25 276.59 241.33 TRUE FALSE 342.106991 311.5179684 462.7803209 349.3961144 446.8429291 394.5944163 223.1034107 283.7473464 305.3425203 271.2277823 1.261327243 1.148547416 1.706242321 1.288201789 1.647482147 1.454845123 0.822568428 1.046158856 1.125778921 1 8.083361154 -7.248498974 24.71193434 1.002473125 1.423200559 0.58352938 0.173425159 484.5771764 925384.7175 0.067910237 0.052254781 5.64E-08 7.248498974 0.420727435 GILSLPHQAS(ph)PVSR ddPTM_A459_MK2206_30min_R1 1 GILSLPHQASPVSR 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 GILSLPHQAS(0.981)PVS(0.019)R 99.915 0.0061903 46317000 3051.2 2929.2 2819.2 2598.6 3198.2 3179.1 3550.1 2561.1 2699.9 2734.2 TRUE FALSE 2791.679418 2738.508548 2627.840559 2798.744622 3070.808922 3359.097895 3313.279307 2538.708573 2980.564267 3072.933338 0.908473797 0.891170828 0.855157034 0.91077297 0.999308668 1.093124232 1.078213857 0.826151528 0.969941075 1 11.58540076 -6.175292698 4.175506191 0.994900145 0.885654286 0.353237849 0.068808874 0.293213591 9.344834715 0.023017339 0.030054188 6.68E-07 6.175292698 -0.109245859 GILSLPHQAS(ph)PVSR ddPTM_A459_MK2206_30min_R2 4 GILSLPHQASPVSR 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 GILSLPHQAS(0.997)PVS(0.003)R;GILSLPHQAS(0.999)PVS(0.001)R;GILSLPHQAS(0.996)PVS(0.004)R;GILSLPHQAS(0.999)PVS(0.001)R 185.63 5.28E-05 98841000 473816 566537 440600 612094 553834 563891 596021 411640 521065 522171 TRUE FALSE 510091.7173 538403.5964 455289.3841 562083.9622 532087.6944 585350.2671 517762.7268 465442.7614 566386.2918 505132.603 1.00981745 1.06586586 0.901326466 1.112745364 1.053362407 1.158805161 1.025003581 0.921426886 1.121262592 1 18.94630264 -4.696524065 20.58295928 1.039126989 1.009810898 0.012934255 0.078726801 27072.57116 8575264.422 0.019512073 36.82086308 2.01E-05 4.696524065 -0.02931609 GIPHLVTHDAR ddPTM_A459_MK2206_30min_R1 2 GIPHLVTHDAR 11 0 P62701;C9JEH7;P22090;Q8TD47 P62701 RPS4X;RPS4Y1;RPS4Y2 "40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2" 0 ; 163.66 0.00031954 65997000 26430 25913 24718.1 20983.4 26992 27134 28598 25463 22460.7 21856.2 FALSE TRUE 24181.98971 24226.05899 23040.30424 22599.5451 25916.85148 28670.30363 26690.2796 25240.37968 24795.57014 24563.91106 0.984451932 0.986245998 0.937973769 0.920030407 1.05507838 1.167171773 1.086564739 1.027539125 1.009430871 1 14.58425266 -6.328570979 7.043275645 1.06644749 0.95803332 0.506726799 0.048123757 0.221731663 20.05297739 0.016205037 0.018424548 4.69E-07 6.328570979 -0.10841417 GIPHLVTHDAR ddPTM_A459_MK2206_30min_R2 1 GIPHLVTHDAR 11 0 P62701;C9JEH7;P22090;Q8TD47 P62701 RPS4X;RPS4Y1;RPS4Y2 "40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2" 0 112.83 0.0041991 4092300 39277 45003 49903 57438 54090 63433 59824 46336 54022 58892 FALSE TRUE 42284.07732 42768.21646 51566.74111 52745.13166 51966.15482 65846.98726 51969.03694 52392.2743 58720.73591 56970.35886 0.742211883 0.750709971 0.905150365 0.92583464 0.912161269 1.155811348 0.912211859 0.919640939 1.030724347 1 15.79792387 -5.383210157 1.162234845 0.987960567 0.703762027 0.644094289 0.069217186 0.458504264 0.977968882 0.02361576 0.123252589 4.14E-06 5.383210157 -0.28419854 GIPLATGDTS(ph)PEPELLPGAPLPPPK ddPTM_A459_MK2206_30min_R1 2 GIPLATGDTSPEPELLPGAPLPPPK 25 0 K7ENA8;O75821;K7EL20;K7ER90;K7EL60 K7ENA8 EIF3G Eukaryotic translation initiation factor 3 subunit G 1 GIPLAT(0.005)GDT(0.135)S(0.859)PEPELLPGAPLPPPK;GIPLAT(0.012)GDT(0.182)S(0.806)PEPELLPGAPLPPPK 126.59 4.72E-08 151404000 16016.3 17895.8 17682.1 13846.2 16878.4 16382.6 18037.2 14246.2 15503.5 15310.1 TRUE FALSE 14654.02958 16730.78017 16481.88832 14912.63672 16206.09759 17310.16865 16833.9713 14121.64698 17115.1443 17206.83077 0.851640245 0.972333627 0.957868915 0.866669576 0.941840935 1.006005631 0.978330729 0.820700056 0.994671508 1 14.07069378 -6.508662826 24.7316902 0.952555617 0.917765633 0.113844875 0.060416207 1798.035242 3128080.016 0.019440343 0.021204012 3.10E-07 6.508662826 -0.034789984 GIPLATGDTS(ph)PEPELLPGAPLPPPK ddPTM_A459_MK2206_30min_R2 5 GIPLATGDTSPEPELLPGAPLPPPK 25 0 K7ENA8;O75821;K7EL20;K7ER90;K7EL60 K7ENA8 EIF3G Eukaryotic translation initiation factor 3 subunit G 1 GIPLAT(0.003)GDT(0.198)S(0.799)PEPELLPGAPLPPPK;GIPLAT(0.029)GDT(0.203)S(0.768)PEPELLPGAPLPPPK;GIPLAT(0.018)GDT(0.203)S(0.78)PEPELLPGAPLPPPK;GIPLAT(0.006)GDT(0.216)S(0.778)PEPELLPGAPLPPPK;GIPLAT(0.011)GDT(0.178)S(0.81)PEPELLPGAPLPPPK 131.26 3.82E-08 39345260 220466.2 241027.8 233164.7 277242.7 244014.8 237079 266215.4 213297.5 205526.4 243366.5 TRUE FALSE 237345.2618 229058.7099 240938.2947 254591.0846 234433.5529 246101.2075 231260.9982 241176.2156 223402.7148 235425.471 1.008154558 0.972956363 1.023416428 1.081408411 0.9957867 1.045346565 0.982310865 1.024427028 0.948931795 1 17.84491089 -8.245656444 24.7970513 0.974465895 1.016754871 0.221841408 0.031659301 973.5781675 1529624.413 0.021707899 0.008141769 5.68E-09 8.245656444 0.042288976 GIPNMLLS(ph)EEETES ddPTM_A459_MK2206_30min_R1 1 GIPNMLLSEEETES 14 0 F5GYQ2;Q9UI30-2;Q9UI30 F5GYQ2 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein 1 GIPNMLLS(0.995)EEET(0.004)ES(0.001) 109.44 0.0045667 4060500 2133 1787.5 2014.3 1793.8 1849.3 1918.3 2172.6 1834.1 1508.5 1275.4 TRUE FALSE 1951.577149 1671.133425 1877.574928 1931.958787 1775.638465 2026.912488 2027.669818 1818.064657 1665.313973 1433.406181 1.361496256 1.165847788 1.309869424 1.347809723 1.238754576 1.414053124 1.414581467 1.26835274 1.161787912 1 10.48523177 -8.486004407 2.113113526 1.003089485 1.317071585 0.661044485 0.072266964 0.193774823 1.942991686 0.072342042 0.020144141 3.27E-09 8.486004407 0.313982099 GIQLS(ph)PGVGSSAGPPGDLEDDEGLKHLQQEAEK ddPTM_A459_MK2206_30min_R2 1 GIQLSPGVGSSAGPPGDLEDDEGLKHLQQEAEK 33 1 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 GIQLS(0.475)PGVGS(0.263)S(0.263)AGPPGDLEDDEGLKHLQQEAEK 51.66 0.0026259 5938900 10970 16447 13432 14054 15807 13678 12618 13043 15056 13930 TRUE FALSE 11809.87163 15630.2659 13879.81618 12905.74324 15186.33776 14198.52587 10961.24144 14747.76488 16365.54366 13475.46524 0.876398063 1.159905474 1.030006455 0.957721534 1.126962037 1.053657564 0.813422115 1.094416009 1.214469658 1 13.71804746 -7.98124278 24.99435689 1.122971008 1.010368251 0.143747555 0.110098345 401.7133197 535290.4341 0.059011038 0.028341384 1.04E-08 7.98124278 -0.112602756 GIQLSPGVGS(ph)SAGPPGDLEDDEGLKHLQQEAEK ddPTM_A459_MK2206_30min_R2 2 GIQLSPGVGSSAGPPGDLEDDEGLKHLQQEAEK 33 1 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 GIQLS(0.165)PGVGS(0.417)S(0.417)AGPPGDLEDDEGLKHLQQEAEK;GIQLS(0.144)PGVGS(0.428)S(0.428)AGPPGDLEDDEGLKHLQQEAEK 63.893 9.82E-05 21984100 53127.5 84001 79430 76241 75449 58574 84552 59147 71141 68116 TRUE FALSE 57194.98225 79829.63249 82078.15656 70011.86642 72486.49316 60803.07461 73450.22083 66877.71598 77328.71559 65893.3805 0.867992837 1.211496995 1.245620667 1.062502271 1.100057284 0.922749359 1.114682845 1.014938306 1.173543002 1 16.00784592 -5.965014154 24.99982297 1.054219946 1.124579295 0.03808886 0.113931774 511.8253788 365731.7269 0.031645625 0.046937874 1.08E-06 5.965014154 0.070359349 GIRDDIEEEDDQEAYFR ddPTM_A459_MK2206_30min_R1 1 GIRDDIEEEDDQEAYFR 17 1 Q86XP3-2;Q86XP3;A0A0A0MSJ0;J3KRE3 Q86XP3-2 DDX42 ATP-dependent RNA helicase DDX42 0 189.8 2.01E-14 0 971.71 789.81 947.8 774.55 988.67 605.88 993.97 963.75 828 736.96 FALSE TRUE 889.0609618 738.3932254 883.4659767 834.2059752 949.2891804 640.184402 927.6640749 955.3240354 914.073563 828.2601686 1.073407844 0.891499137 1.066652738 1.00717867 1.14612439 0.772926704 1.120015317 1.153410573 1.103606811 1 9.6939402 GIS(ph)HVIVDEIHER ddPTM_A459_MK2206_30min_R2 2 GISHVIVDEIHER 13 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 1 GIS(1)HVIVDEIHER;GIS(1)HVIVDEIHER 94.339 0.01259 1652200 2515.4 763.99 665.05 2363.5 2062 1804.48 2283.2 1893.88 1643.4 2053.94 TRUE FALSE 2707.980958 726.0513675 687.2224351 2170.39449 1981.035519 1873.150751 1983.413097 2141.416619 1786.339961 1986.920106 1.362903798 0.365415482 0.34587321 1.092341098 0.997038338 0.942740851 0.998234952 1.077756782 0.899049718 1 10.95631815 -5.788265216 24.99582839 1.0015524 0.658798941 0.218703312 0.266046889 286.8428289 267273.8579 0.074165738 0.110039086 1.63E-06 5.788265216 -0.342753459 GIS(ph)PIVFDR ddPTM_A459_MK2206_30min_R1 6 GISPIVFDR 9 0 J3QR07;Q96MU7;Q96MU7-2 J3QR07 YTHDC1 YTH domain-containing protein 1 1 GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR 140.07 0.0023247 470007400 26538.7 26378.3 26149.1 20961.7 24212.7 23264.8 29597.2 23473.9 28125.8 32498.2 TRUE FALSE 24281.4442 24661.06788 24374.17195 22576.17377 23248.25689 24582.03287 27622.82479 23268.67017 31049.57756 36524.32236 0.664802045 0.675195768 0.667340839 0.618113419 0.636514393 0.673031867 0.756285757 0.637073289 0.850106875 1 15.15656989 -8.485379802 2.78359703 0.999516114 0.666546952 0.899031171 0.036349231 0.072058736 1.262849804 0.036519096 0.009832585 3.27E-09 8.485379802 -0.332969161 GIS(ph)PIVFDR ddPTM_A459_MK2206_30min_R2 6 GISPIVFDR 9 0 J3QR07;Q96MU7;Q96MU7-2 J3QR07 YTHDC1 YTH domain-containing protein 1 1 GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR 140.07 0.0023247 411086400 151465 138644 133484 145052 117376 122125 136908 109639 105820 137162 TRUE FALSE 163061.2769 131759.1406 137934.2899 133200.7876 112767.2285 126772.5525 118931.8151 123969.1937 115024.0323 132686.4152 1.228922167 0.993011533 1.039550957 1.003876602 0.849877724 0.95542978 0.896337541 0.93430208 0.866886276 1 17.01766115 -1.522878745 0.624726627 0.917780916 22.74506384 0.724257773 0.054054554 97.1917546 0.689217197 0.022692727 2915.91788 0.03 1.522878745 21.82728293 GIS(ph)PVVSEHR ddPTM_A459_MK2206_30min_R1 3 GISPVVSEHR 10 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 GIS(1)PVVSEHR;GIS(0.959)PVVS(0.041)EHR;GIS(1)PVVSEHR 98.902 0.012612 13355900 21795 8056.4 8780 6400.5 30243.3 29726 27044.8 18675.8 8629.2 8165.9 TRUE FALSE 19941.2208 7531.926896 8184.038062 6893.467619 29038.64532 31409.06043 25240.69074 18512.51945 9526.23622 9177.553341 2.172825377 0.82069007 0.891745083 0.751122588 3.16409442 3.422378412 2.750263583 2.017151932 1.03799301 1 13.16389388 -6.248951455 24.96093481 2.368271918 1.11582743 0.272915319 0.839229464 934.7548802 1868392.732 0.260204306 0.333545482 5.64E-07 6.248951455 -1.252444488 GIS(ph)PVVSEHR ddPTM_A459_MK2206_30min_R2 1 GISPVVSEHR 10 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 GIS(1)PVVSEHR 80.312 0.031677 2439800 14828 39391 25593 56407 56768 62620 36990 32404 46774 22939 TRUE FALSE 15963.24308 37434.90022 26446.25785 51798.36766 54539.00308 65003.04798 32133.16857 36639.31406 50842.31797 22190.50231 0.719372769 1.686978496 1.191782749 2.334258456 2.457763341 2.929318457 1.44805954 1.651125943 2.291174723 1 14.4376547 -5.752781585 24.98832939 2.075890367 1.248137788 0.299819898 0.565221576 235.8589194 680734.3774 0.155600644 0.264204329 1.77E-06 5.752781585 -0.827752578 GIS(ph)SLPR ddPTM_A459_MK2206_30min_R2 2 GISSLPR 7 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 GIS(0.663)S(0.337)LPR;GIS(0.51)S(0.49)LPR 85.212 0.036515 57847000 171513 170377 146822 146374 103433 121482 106078 109839 125414 106684 TRUE FALSE 184644.1672 161916.3259 151716.9722 134414.776 99371.70071 126105.0826 92149.83118 124195.3344 136322.283 103202.9098 1.78913722 1.56891241 1.470084249 1.302432036 0.962876927 1.221914022 0.892899545 1.203409232 1.32091511 1 16.65512412 -5.557219652 1.275275846 1.103737575 1.747845301 0.76199251 0.13077925 0.261441704 0.778333552 0.043803508 0.152793505 2.77E-06 5.557219652 0.644107726 GISEDSHLESLQDVGQSAAPT(ph)FMISPETVTGTGKK ddPTM_A459_MK2206_30min_R1 1 GISEDSHLESLQDVGQSAAPTFMISPETVTGTGKK 35 1 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 GISEDSHLESLQDVGQS(0.024)AAPT(0.59)FMIS(0.383)PET(0.002)VTGTGKK 130.25 1.06E-25 58703000 4770.3 3778.9 4479.9 3744.7 5837.7 4393.3 4246.4 4586.8 2514.3 1950.2 TRUE FALSE 4364.560935 3532.892923 4175.81687 4033.117443 5605.172047 4642.044849 3963.130404 4546.698091 2775.670483 2191.805499 1.991308506 1.611864248 1.905194996 1.840089116 2.557330954 2.117909117 1.808157889 2.074407648 1.266385399 1 11.09790406 -8.379592902 3.548363304 1.010957295 1.986366114 0.680803286 0.236778672 0.141362426 3.065884163 0.242751142 0.064737672 4.17E-09 8.379592902 0.975408819 GISEDSHLESLQDVGQSAAPTFMIS(ph)PETVTGTGKK ddPTM_A459_MK2206_30min_R1 1 GISEDSHLESLQDVGQSAAPTFMISPETVTGTGKK 35 1 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 GISEDSHLESLQDVGQS(0.006)AAPT(0.025)FMIS(0.957)PET(0.01)VT(0.002)GT(0.001)GKK 107.74 1.57E-14 46524000 5550.4 3340.8 3661 4300 5976.7 5189.1 4437.7 4753.3 3157.6 1848.2 TRUE FALSE 5078.309334 3123.313313 3412.50152 4631.186745 5738.635383 5482.902358 4141.66913 4711.742399 3485.84382 2077.168969 2.444822453 1.503639501 1.642861785 2.229566691 2.76271958 2.639603441 1.993900925 2.268348155 1.678170564 1 11.02040286 -8.566552286 2.721715721 1.001241488 2.174394495 0.490953301 0.376743734 0.284538935 5.197981123 0.403760937 0.108525751 2.71E-09 8.566552286 1.173153008 GISEDSHLESLQDVGQSAAPTFMIS(ph)PETVTGTGKK ddPTM_A459_MK2206_30min_R2 2 GISEDSHLESLQDVGQSAAPTFMISPETVTGTGKK 35 1 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 GISEDSHLESLQDVGQS(0.011)AAPT(0.152)FMIS(0.769)PET(0.033)VT(0.017)GT(0.017)GKK;GISEDSHLESLQDVGQS(0.016)AAPT(0.205)FMIS(0.774)PET(0.004)VT(0.001)GTGKK 90.454 3.63E-09 18406900 36466 64823 52190 77198 77906 77212 77388 53319 70823 60453 TRUE FALSE 39257.865 61603.98408 53929.98855 70890.67646 74847.01899 80150.35677 67226.86264 60287.97637 76983.05652 58480.42356 0.671299259 1.053412071 0.922188747 1.21221209 1.279864516 1.37055021 1.149561829 1.030908682 1.316390201 1 15.83566614 -4.347389059 0.873685882 1.198256852 4.05E-13 0.573991452 0.130499891 3.223209343 1.137535936 0.046298385 4.427131708 4.49E-05 4.347389059 -1.198256852 GISHVIVDEIHER ddPTM_A459_MK2206_30min_R1 4 GISHVIVDEIHER 13 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ;;; 230.81 2.20E-13 23637900 10814.4 10851.2 10889.8 9296.7 11175 12063.5 12970.2 10417.6 10231.2 9675.1 FALSE TRUE 9894.578491 10144.78491 10150.63072 10012.73344 10729.87609 12746.52494 12104.98162 10326.52002 11294.76985 10873.72443 0.90995303 0.932963215 0.933500824 0.920819128 0.986771014 1.172231743 1.113232334 0.94967645 1.038721362 1 13.40855855 -6.526544734 24.98732144 1.057972077 0.929110162 0.541058846 0.056602228 90.73918973 618468.6309 0.02003831 0.020126213 2.97E-07 6.526544734 -0.128861914 GISHVIVDEIHER ddPTM_A459_MK2206_30min_R2 2 GISHVIVDEIHER 13 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ; 207.34 6.28E-06 11409800 50708 59516 51378 64529 68933 64978 61987 44955 50932 55027 FALSE TRUE 54590.24347 56560.52198 53090.91688 59256.77428 66226.34406 67450.78332 53848.03244 50830.77285 55361.9733 53231.4735 1.025525688 1.062539101 0.99735952 1.113190569 1.244120061 1.267122228 1.011582601 0.954900729 1.040023311 1 15.69999188 -7.490447842 24.96197213 0.99512549 1.117728578 0.325208774 0.082466618 839.8622414 646441.1328 0.039377536 0.026522817 3.23E-08 7.490447842 0.122603088 GISQDRS(ph)PLVK ddPTM_A459_MK2206_30min_R2 1 GISQDRSPLVK 11 1 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 GISQDRS(1)PLVK 63.694 0.047093 19336000 109160 106950 110960 122070 101660 98265 116260 99358 105590 137560 TRUE FALSE 117517.3735 101639.0185 114659.351 112096.4905 97668.3176 102004.5434 100994.9223 112344.4317 114774.0273 133071.4285 0.883114992 0.763792947 0.861637636 0.842378351 0.733954078 0.766539779 0.758952718 0.84424157 0.862499401 1 17.02184132 -8.675147699 1.523697897 0.999078224 0.801253385 0.610176896 0.047050359 0.421080861 1.969887287 0.046290829 0.013478271 2.11E-09 8.675147699 -0.197824839 GISQEQMQEFR ddPTM_A459_MK2206_30min_R1 3 GISQEQMQEFR 11 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ;; 215.72 0.0028571 230643000 3659.62 4155.1 4001.1 3311.4 3640.34 3591.67 3418.67 3133.04 3913 3854.6 FALSE TRUE 3348.350102 3884.602235 3729.51648 3566.444602 3495.337549 3795.027252 3190.616762 3105.648162 4319.770353 4332.136949 0.772909569 0.896694237 0.860895333 0.823252968 0.806839117 0.876017378 0.736499515 0.716885961 0.997145382 1 12.08086314 -8.283554872 24.16965561 0.998572846 0.815672697 0.649250968 0.054996841 398.2208761 435202.7685 0.055844588 0.014476087 5.21E-09 8.283554872 -0.182900149 GISQEQMQEFR ddPTM_A459_MK2206_30min_R2 3 GISQEQMQEFR 11 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ;; 205.59 0.00026102 56976000 51230.1 56503 63983.8 69064 75420 70487 72670 61723.4 53801.8 65588 FALSE TRUE 55152.31585 53697.14318 66116.98796 63421.25028 72458.63184 73169.43218 63128.34171 69790.86031 58481.38331 63447.86893 0.869254031 0.846319098 1.042067907 0.999580464 1.14201837 1.153221273 0.994963941 1.099971701 0.921723366 1 15.95328409 -5.275588835 7.270419022 1.052052456 0.857323255 0.541344846 0.068329997 0.102026168 33.12033572 0.017971296 0.040268422 5.30E-06 5.275588835 -0.194729201 GISS(ph)DNESVASCNSVK ddPTM_A459_MK2206_30min_R2 2 GISSDNESVASCNSVK 16 0 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;Q8IVL1-5;E9PNV5 A0A0A0MTL4 NAV2 Neuron navigator 2 1 GIS(0.452)S(0.548)DNESVASCNSVK;GIS(0.003)S(0.997)DNESVASCNSVK 282.52 9.45E-63 12489800 111111 148230 140293 141353 139146 128551 148398 126401 141821 127314 TRUE FALSE 119617.7436 140869.1137 144970.2986 129804.0077 133682.4289 133443.0984 128913.1643 142922.0447 154156.3342 123159.7546 0.971240516 1.14379177 1.177091486 1.053948249 1.085439227 1.083495975 1.046715015 1.160460616 1.251677829 1 16.91017137 -7.77978494 24.82096265 1.154551963 1.085728208 0.086642988 0.077921614 466.5711879 631246.8736 0.041117876 0.019810318 1.66E-08 7.77978494 -0.068823755 GITVTAYS(ph)PLGSPDRPWAKPEDPSLLEDPK ddPTM_A459_MK2206_30min_R2 1 GITVTAYSPLGSPDRPWAKPEDPSLLEDPK 30 2 O60218;C9JRZ8;C9JRZ8-2 O60218 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 1 GIT(0.117)VT(0.083)AY(0.192)S(0.273)PLGS(0.254)PDRPWAKPEDPS(0.08)LLEDPK 41.27 0.027276 11630000 28857 27567 26502 26019 25192 17031 31423 27048 21734 28032 TRUE FALSE 31066.31411 26198.06287 27385.56345 23893.16447 24202.8355 17679.12664 27297.12235 30583.26647 23624.38403 27117.31814 1.145626347 0.966100804 1.00989203 0.88110352 0.892523198 0.651949671 1.006630605 1.127813094 0.871191757 1 14.72692688 -4.136879773 1.148106497 0.920950299 1.75946628 0.231236046 0.118368983 9.73812331 3.76714426 0.038320998 14.08579383 7.30E-05 4.136879773 0.838515981 GITVTAYSPLGSPDRPWAKPEDPSLLEDPK ddPTM_A459_MK2206_30min_R1 1 GITVTAYSPLGSPDRPWAKPEDPSLLEDPK 30 2 O60218;C9JRZ8;C9JRZ8-2 O60218 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 80.664 1.27E-05 19499000 2414.4 3465.1 3281.4 3323.8 1684.5 1737.1 2111.7 2470.2 2671.4 2782.6 FALSE TRUE 2209.042601 3239.52136 3058.667711 3579.799652 1617.402798 1835.453101 1970.832346 2448.603302 2949.10159 3127.329496 0.706367079 1.035874654 0.978044595 1.144682598 0.517183367 0.586907489 0.630196578 0.782969401 0.943009553 1 11.61071551 -6.257406636 24.99984525 0.719043633 0.972058995 0.275497504 0.174294139 433.2231173 2685641.472 0.053228963 0.066191786 5.53E-07 6.257406636 0.253015362 GIVEFSGKPAAR ddPTM_A459_MK2206_30min_R2 1 GIVEFSGKPAAR 12 1 Q15233-2;Q15233;H7C367;C9IZL7 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 0 136.81 0.0038789 5059800 17369 23599 19078 28645 18736 22491 22436 15947 18133 19850 FALSE TRUE 18698.78399 22427.10798 19714.051 26304.61187 18000.3305 23346.91077 19490.12625 18031.32765 19710.17556 19202.29613 0.973778546 1.167938867 1.026650712 1.369868046 0.937405109 1.215839534 1.01498936 0.939019351 1.026448891 1 14.22899121 -7.480801482 12.65840641 0.985038101 1.116982749 0.199030079 0.118866343 2.721151943 817.8112054 0.046961509 0.031543577 3.31E-08 7.480801482 0.131944648 GIVVTAYSPLGS(ph)PDRPWAKPEDPSLLEDPR ddPTM_A459_MK2206_30min_R2 1 GIVVTAYSPLGSPDRPWAKPEDPSLLEDPR 30 2 P15121;E9PCX2 P15121 AKR1B1 Aldose reductase 1 GIVVT(0.063)AY(0.177)S(0.177)PLGS(0.575)PDRPWAKPEDPS(0.008)LLEDPR 41.047 0.028156 3482500 7527 8815.8 7712.8 8579 9391.6 6837.9 10113 8679.5 8572.3 9693.5 TRUE FALSE 8103.272907 8378.020191 7969.940902 7878.068257 9022.838595 7098.121076 8785.150952 9813.940451 9317.903159 9377.201889 0.86414615 0.893445645 0.849927409 0.840129961 0.962210124 0.75695513 0.936862729 1.046574508 0.993676287 1 13.19494178 -7.52874659 6.937272857 1.011394012 0.864099108 0.657181577 0.049439381 0.080622259 21.65488906 0.021604235 0.012960701 2.96E-08 7.52874659 -0.147294904 GIYAYGFEKPS(ph)AIQQR ddPTM_A459_MK2206_30min_R2 1 GIYAYGFEKPSAIQQR 16 1 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;J3QR64;Q14240-2;Q14240;E7EQG2;J3QLN6;J3KS25;J3QKZ9;J3KT04;J3KSN7;E7EMV8;J3KS93;F8WE11;E9PBH4;J3QQP0;I3L3H2;P38919 P60842;I3L3H2 EIF4A1;EIF4A2;EIF4A3 "Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed" 1 GIYAYGFEKPS(0.999)AIQQR 72.489 0.020451 5160900 14522 17802 14569 17387 14480 14180 15850 15784 10551 14134 TRUE FALSE 15633.81549 16917.97857 15054.72319 15966.42648 13911.44244 14719.62984 13768.87596 17847.02299 11468.70691 13672.80874 1.143423841 1.237344783 1.101070269 1.167750298 1.017453159 1.076562257 1.007026151 1.305293107 0.838796704 1 13.73902202 -1.522878792 0.145209391 0.969246223 1.791778043 0.216457389 0.112181243 116.2122175 1.118889483 0.416342952 19.98287397 0.029999997 1.522878792 0.82253182 GIYAYGFEKPSAIQQR ddPTM_A459_MK2206_30min_R2 1 GIYAYGFEKPSAIQQR 16 1 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;J3QR64;Q14240-2;Q14240;E7EQG2;J3QLN6;J3KS25;J3QKZ9;J3KT04;J3KSN7;E7EMV8;J3KS93;F8WE11;E9PBH4;J3QQP0;I3L3H2;P38919 P60842;I3L3H2 EIF4A1;EIF4A2;EIF4A3 "Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed" 0 160.18 0.00015783 9098200 28819 28688 15837 30283 29347 26642 28551 20077 24476 34186 FALSE TRUE 31025.4048 27263.39564 16364.99768 27808.78203 28194.68932 27655.87998 24802.2194 22701.13283 26604.87824 33070.51362 0.938159145 0.824401942 0.494851633 0.840893563 0.852562789 0.836270047 0.749979867 0.686446334 0.804489417 1 15.01325783 -8.562745839 20.15927796 1.000000004 0.773768488 0.251271735 0.11410279 2020.510508 1021696.051 0.113569309 0.02932347 2.74E-09 8.562745839 -0.226231516 GKAS(ph)PFEEDQNR ddPTM_A459_MK2206_30min_R2 4 GKASPFEEDQNR 12 1 Q8TB72-3;Q8TB72;C9JW01;Q8TB72-2;Q8TB72-4;A0A0A0MR59;A0A0C4DG68 Q8TB72-3 PUM2 Pumilio homolog 2 1 GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR 180.95 0.00049388 244757000 252870 272919 287375 303394 296675 278298 308771 271701 275420 273907 TRUE FALSE 272229.9216 259366.2393 296955.9391 278605.7397 285026.0488 288888.8254 268228.9968 307213.2536 299375.5338 264969.437 1.027401215 0.978853419 1.120717704 1.051463681 1.075694058 1.090272254 1.012301644 1.159429016 1.129849303 1 18.01546644 -5.25523379 24.97299772 1.082440844 1.003127314 0.284791795 0.048580593 592.2635219 2383417.712 0.012243042 0.030708288 5.56E-06 5.25523379 -0.07931353 GKGGVTGS(ph)PEASISGSK ddPTM_A459_MK2206_30min_R1 3 GKGGVTGSPEASISGSK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GKGGVT(0.342)GS(0.655)PEAS(0.003)IS(0.001)GSK;GKGGVT(0.07)GS(0.678)PEAS(0.228)IS(0.023)GS(0.001)K;GKGGVT(0.001)GS(0.999)PEASISGSK 304.91 5.69E-89 971940000 22339 23833.5 21857.9 21232.3 21102.8 20867.9 21218.7 22992.7 18135.8 14084.6 TRUE FALSE 20438.95074 22281.93482 20374.24665 22867.61542 20262.23079 22049.42246 19803.23924 22791.67725 20021.08131 15829.50658 1.291193168 1.407620301 1.287105605 1.444619597 1.280029209 1.39293176 1.251033261 1.439822343 1.264795034 1 13.95032867 -8.547189073 20.58009732 0.999999998 1.348469491 0.713544409 0.066550652 252.8464496 214049.6061 0.057106271 0.014744776 2.84E-09 8.547189073 0.348469492 GKGGVTGS(ph)PEASISGSK ddPTM_A459_MK2206_30min_R2 3 GKGGVTGSPEASISGSK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GKGGVTGS(0.998)PEAS(0.002)ISGSK;GKGGVTGS(1)PEASISGSK;GKGGVT(0.114)GS(0.881)PEAS(0.004)IS(0.001)GSK 139.25 0.00027876 646407000 270321 346940 370280 389643 417623 310521 442257 302573 349963 362014 TRUE FALSE 291016.9836 329711.4641 382624.9504 357807.9205 401225.0226 322338.0942 384188.1247 342120.33 380402.1492 350201.5128 0.830998648 0.94149069 1.092585087 1.021720088 1.145697571 0.920436042 1.097048729 0.976924192 1.086237881 1 18.41782579 -4.959866738 3.161412382 1.04201866 0.831087452 0.52744334 0.063263747 0.195440542 3.689079134 0.015170509 0.083035788 1.10E-05 4.959866738 -0.210931208 GKGGVTGSPEASISGS(ph)KGDLK ddPTM_A459_MK2206_30min_R1 2 GKGGVTGSPEASISGSKGDLK 21 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GKGGVTGSPEAS(0.028)IS(0.245)GS(0.727)KGDLK;GKGGVTGSPEASIS(0.003)GS(0.997)KGDLK 143.63 9.51E-06 20911600 6738.4 8059.7 7262.2 7387.2 5412.4 5293.9 6682.4 7396.4 8288.7 6620 TRUE FALSE 6165.263695 7535.012065 6769.262098 7956.163424 5196.812647 5593.636043 6236.629289 7331.734055 9150.340026 7440.135578 0.828649375 1.012751984 0.909830476 1.069357317 0.698483595 0.751819101 0.83824135 0.985430168 1.229862 1 12.8611132 -8.007856215 5.068992142 1.115916685 0.877110322 0.41130438 0.115992888 0.181332624 13.76758072 0.07814747 0.031936774 9.82E-09 8.007856215 -0.238806363 GKGS(ph)PRPQAPK ddPTM_A459_MK2206_30min_R1 1 GKGSPRPQAPK 11 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 GKGS(1)PRPQAPK 142.08 0.031048 41829000 5510.8 5280.7 4772.2 4875.4 3713.4 4077.2 5217.5 5132.9 799.99 3487.3 TRUE FALSE 5042.077522 4936.92547 4448.27636 5250.904153 3565.487415 4308.047541 4869.450095 5088.023596 883.1518233 3919.333052 1.286463144 1.259634077 1.134957479 1.339744309 0.909717895 1.099178734 1.242418042 1.298186076 0.22533217 1 11.93639246 -8.243113886 24.99867448 0.61266602 1.189885012 0.552619282 0.20998392 488.7211391 666690.1844 0.133556986 0.050272944 5.71E-09 8.243113886 0.577218992 GKIEVLDS(ph)PASK ddPTM_A459_MK2206_30min_R2 3 GKIEVLDSPASK 12 1 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 GKIEVLDS(0.999)PAS(0.001)K;GKIEVLDS(0.742)PAS(0.258)K;GKIEVLDS(0.779)PAS(0.221)K 136.57 0.006629 134213200 219692 207656 209548 219737 245448 177749 266891 196286 182040 259516 TRUE FALSE 236511.7884 197344.105 216534.2257 201783.7842 235810.4782 184513.3627 231847.8911 221941.2542 197873.5101 251048.0142 0.942097826 0.786081123 0.862521165 0.803765705 0.939304296 0.734972405 0.923520116 0.884058991 0.788189904 1 17.93760379 -11.261014 2.72999793 1.028739269 0.850816423 0.29904768 0.068144436 56436900.71 44406666.41 10972261.23 0.016083864 5.48E-12 11.261014 -0.177922846 GKIEVLDSPAS(ph)K ddPTM_A459_MK2206_30min_R1 2 GKIEVLDSPASK 12 1 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 GKIEVLDS(0.091)PAS(0.909)K;GKIEVLDSPAS(1)K 220.97 1.36E-07 159792000 12938.7 13053.5 12442 11097.6 10691.7 11335.9 11708.6 11810.3 10612.7 9481.3 TRUE FALSE 11838.19562 12203.71478 11597.47171 11952.33907 10265.82695 11977.72886 10927.54066 11707.04379 11715.92814 10655.91502 1.11095064 1.145252637 1.088360003 1.121662386 0.963392344 1.124045081 1.025490597 1.098642751 1.099476499 1 13.37936686 -1.522878745 0.26054633 1.046873429 1.64718214 0.211294657 0.050710933 83.76901475 1.156755223 0.060796648 22.34304413 0.03 1.522878745 0.600308711 GKIEVLDSPAS(ph)KK ddPTM_A459_MK2206_30min_R1 1 GKIEVLDSPASKK 13 2 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 GKIEVLDS(0.302)PAS(0.698)KK 82.59 0.037005 17676000 5033.7 5093.4 5218.6 4754.4 4798.2 4126.1 3980.3 4499.1 3711.6 2951.5 TRUE FALSE 4605.557382 4761.818734 4864.375972 5120.584712 4607.077534 4359.716216 3714.781449 4459.764843 4097.434102 3317.154103 1.388406218 1.43551327 1.466430507 1.543668022 1.388864488 1.314294145 1.119870025 1.344455128 1.235225731 1 11.69573032 -6.85166103 2.390589893 1.20364157 1.456647266 0.649856863 0.092500828 0.196721665 2.295294354 0.03590446 0.031364857 1.41E-07 6.85166103 0.253005696 GKLS(ph)AEENPDDSEVPSSSGINSTK ddPTM_A459_MK2206_30min_R1 4 GKLSAEENPDDSEVPSSSGINSTK 24 1 A0A494C1S7;Q9Y5Q9-2;Q9Y5Q9 A0A494C1S7 GTF3C3 General transcription factor 3C polypeptide 3 1 GKLS(1)AEENPDDSEVPSSSGINSTK;GKLS(0.997)AEENPDDS(0.003)EVPSSSGINSTK;GKLS(1)AEENPDDSEVPSSSGINSTK;GKLS(0.996)AEENPDDS(0.004)EVPSSSGINSTK 139.57 2.76E-08 350568000 16251.9 16387.6 16591.9 14555.1 14132.3 12261.3 14364.8 14918 13900.7 13011.1 TRUE FALSE 14869.59056 15320.76426 15465.68806 15676.13632 13569.38057 12955.52421 13406.5504 14787.5735 15345.72751 14623.0133 1.016862275 1.04771595 1.057626615 1.072018195 0.927946948 0.885968162 0.916811749 1.011253508 1.04942307 1 13.83595301 -6.258098005 24.96303388 0.959412186 1.049143693 0.424898344 0.047196472 301.2657529 2250720.621 0.015864285 0.019634688 5.52E-07 6.258098005 0.089731507 GKLS(ph)AEENPDDSEVPSSSGINSTK ddPTM_A459_MK2206_30min_R2 5 GKLSAEENPDDSEVPSSSGINSTK 24 1 A0A494C1S7;Q9Y5Q9-2;Q9Y5Q9 A0A494C1S7 GTF3C3 General transcription factor 3C polypeptide 3 1 GKLS(0.999)AEENPDDS(0.001)EVPSSSGINSTK;GKLS(1)AEENPDDSEVPSSSGINSTK;GKLS(1)AEENPDDSEVPSSSGINSTK;GKLS(0.987)AEENPDDS(0.013)EVPSSSGINSTK;GKLS(1)AEENPDDSEVPSSSGINSTK 139.59 2.75E-08 342108400 608365 617142 610157 647696 670029 478558 755027 562759 500655 665850 TRUE FALSE 654941.8922 586495.6257 630499.3298 594777.1649 643720.2948 496769.86 655891.0479 636313.5335 544201.0669 644123.369 1.016795731 0.910533065 0.978848712 0.923390135 0.999374228 0.771234027 1.018269294 0.987875249 0.844870863 1 19.29697751 -4.749083545 24.15807866 0.936943076 1.016796017 0.093018328 0.074602884 957.4769449 1871876.705 0.017695448 0.289532716 1.78E-05 4.749083545 0.079852941 GKPPS(ph)PTPWSGSNMK ddPTM_A459_MK2206_30min_R2 1 GKPPSPTPWSGSNMK 15 1 Q9Y6R9-2;Q9Y6R9 Q9Y6R9-2 CCDC61 Coiled-coil domain-containing protein 61 1 GKPPS(0.599)PT(0.397)PWS(0.003)GS(0.001)NMK 83.666 0.012677 10185000 69732 61510 59775 74821 61157 61348 90061 57917 53343 84624 TRUE FALSE 75070.73553 58455.50284 61767.86867 68707.88496 58755.66889 63682.64113 78235.88252 65486.95076 57982.67772 81862.72581 0.917031956 0.714067389 0.754529831 0.839306098 0.717734088 0.777919871 0.955696036 0.799960545 0.708291559 1 16.32091909 GKS(ph)EEELEASK ddPTM_A459_MK2206_30min_R1 1 GKSEEELEASK 11 1 Q7RTP6;J3QR21;A0A5F9ZHV5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 GKS(1)EEELEASK 162.88 0.0029953 6563500 1441 1397.3 1399 1333.6 1107.4 976.93 1109 1069.9 1074.8 1196.1 TRUE FALSE 1318.435383 1306.335516 1304.039778 1436.314103 1063.289913 1032.242932 1035.020633 1060.545977 1186.529306 1344.281898 0.980772995 0.971772005 0.970064225 1.068461983 0.790972425 0.767876837 0.769943146 0.788931234 0.882649173 1 10.39261999 -6.271308407 24.99584063 0.816393477 0.993932133 0.553792846 0.071275307 464.2453159 1175817.955 0.021291959 0.024437691 5.35E-07 6.271308407 0.177538657 GKS(ph)EEELEASK ddPTM_A459_MK2206_30min_R2 1 GKSEEELEASK 11 1 Q7RTP6;J3QR21;A0A5F9ZHV5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 GKS(1)EEELEASK 132.86 0.0091687 4659100 15345 17942 13472 15008 12821 8208.8 23763 16118 12709 17231 TRUE FALSE 16519.825 17051.02637 13921.14976 13781.79839 12317.58312 8521.191636 20642.88956 18224.67794 13814.40585 16668.75388 0.991065386 1.022933477 0.835164395 0.82680436 0.738962445 0.511207478 1.238418283 1.093343754 0.828760563 1 14.02485864 -9.671478184 9.972863471 1.000008062 0.897858689 0.024621455 0.191579607 0 0 0.197912224 0.048000765 2.13E-10 9.671478184 -0.102149373 GKS(ph)SPICSTTGDDK ddPTM_A459_MK2206_30min_R1 1 GKSSPICSTTGDDK 14 1 Q12802-4;Q12802;Q12802-2;H0YMW2 Q12802-4 AKAP13 A-kinase anchor protein 13 1 GKS(0.942)S(0.058)PICSTTGDDK 67.095 0.036987 4615000 827.72 1383.6 1136.3 875.36 785.47 882.45 1185.6 978.76 1423.2 1510 TRUE FALSE 757.3180675 1293.527389 1059.171122 942.7803789 754.1830666 932.4135564 1106.510787 970.2028045 1571.146733 1697.0702 0.446250289 0.762212069 0.624117448 0.555534107 0.444402987 0.549425449 0.652012384 0.571692794 0.925799494 1 10.72883053 -8.316910392 3.769333457 0.994710146 0.578714598 0.753143384 0.088974005 0.113921103 3.121973328 0.085419796 0.023360677 4.82E-09 8.316910392 -0.415995548 GKS(ph)SPICSTTGDDK ddPTM_A459_MK2206_30min_R2 1 GKSSPICSTTGDDK 14 1 Q12802-4;Q12802;Q12802-2;H0YMW2 Q12802-4 AKAP13 A-kinase anchor protein 13 1 GKS(0.5)S(0.5)PICSTTGDDK 62.525 0.04492 4515700 27170 20890 22605 22437 20349 15535 28305 18190 16628 24208 TRUE FALSE 29250.15609 19852.63298 23358.63942 20603.82533 19549.99601 16126.19531 24588.5195 20567.49546 18074.27338 23418.09494 1.249040802 0.847747566 0.997461129 0.879824998 0.834824355 0.688621143 1.049979495 0.878273639 0.771808015 1 14.5153361 -4.758343877 24.96695113 0.880456415 1.249041315 0.526053519 0.10415442 67.98215844 548217.797 0.025678634 0.177359817 1.74E-05 4.758343877 0.3685849 GKSEEELEAS(ph)K ddPTM_A459_MK2206_30min_R1 1 GKSEEELEASK 11 1 Q7RTP6;J3QR21;A0A5F9ZHV5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 GKSEEELEAS(1)K 149.57 0.0029851 5963100 2252 1926.5 2134.3 1944.8 1660.4 1580.3 1897.6 1768.1 2323.3 2036 TRUE FALSE 2060.455574 1801.0845 1989.429663 2094.588833 1594.262752 1669.77522 1771.014566 1752.641688 2564.815349 2288.235051 0.900456259 0.78710642 0.869416654 0.915373109 0.696721585 0.729721896 0.773965317 0.765936038 1.12087058 1 11.16001954 -8.2582695 24.99713877 1.060435305 0.802946556 0.663588186 0.072785441 158.2743921 1248150.887 0.056712238 0.019436756 5.52E-09 8.2582695 -0.257488749 GKSEVPEDLAGFIELFQT(ph)PSHTK ddPTM_A459_MK2206_30min_R1 1 GKSEVPEDLAGFIELFQTPSHTK 23 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 GKSEVPEDLAGFIELFQT(0.893)PS(0.096)HT(0.011)K 94.834 4.63E-05 3100700 2617.2 2771.4 1874.1 2327.5 2331 2141.1 1677.6 1696.1 1376.5 1214.4 TRUE FALSE 2394.593397 2590.981356 1746.891314 2506.764453 2238.151334 2262.327232 1565.690365 1681.271177 1519.592101 1364.84904 1.75447491 1.898364786 1.279915406 1.836660597 1.639852664 1.657565903 1.147152776 1.231836728 1.113377418 1 10.41452567 -7.257366938 5.618480648 1.139593978 1.677050843 0.733311445 0.163801286 0.090155037 11.12172412 0.065766746 0.047421904 5.53E-08 7.257366938 0.537456866 GKSS(ph)PICSTTGDDK ddPTM_A459_MK2206_30min_R2 1 GKSSPICSTTGDDK 14 1 Q12802-4;Q12802;Q12802-2;H0YMW2 Q12802-4 AKAP13 A-kinase anchor protein 13 1 GKS(0.269)S(0.721)PICS(0.004)T(0.005)T(0.001)GDDK 62.916 0.044117 5617000 23494 21348 20506 18253 15518 11736 22370 16220 12825 20455 TRUE FALSE 25292.7187 20287.88936 21189.65981 16761.67151 14908.68535 12182.6217 19432.79213 18340.00969 13940.49532 19787.55503 1.278213436 1.025285304 1.070857909 0.847081486 0.753437468 0.615670895 0.982071413 0.92684567 0.704508228 1 14.27230574 -5.289377732 1.233294696 0.822258739 1.257415839 0.543522631 0.125414895 0.563089145 1.288386859 0.041334703 0.248647586 5.14E-06 5.289377732 0.4351571 GKSSPICS(ph)TTGDDKLCADSACQQNTVTSSGDLVAK ddPTM_A459_MK2206_30min_R2 1 GKSSPICSTTGDDKLCADSACQQNTVTSSGDLVAK 35 2 Q12802-4;Q12802;Q12802-2;H0YMW2 Q12802-4 AKAP13 A-kinase anchor protein 13 1 GKS(0.064)S(0.165)PICS(0.239)T(0.239)T(0.239)GDDKLCADS(0.035)ACQQNT(0.01)VT(0.005)S(0.002)SGDLVAK 50.099 0.0035471 8289900 20584 25060 28602 24495 23791 17743 30075 15275 16616 23799 TRUE FALSE 22159.92687 23815.55684 29555.5764 22493.68014 22856.8458 18418.2223 26126.11637 17271.49495 18061.22965 23022.44058 0.962535957 1.034449704 1.283772513 0.977032824 0.992807245 0.800011721 1.134810894 0.750202607 0.78450543 1 14.49075316 -6.281427873 2.31390859 0.895355412 1.086719618 0.265395394 0.133571364 0.409076154 4.3068791 0.04533243 0.057127595 5.23E-07 6.281427873 0.191364207 GLAAEDS(ph)GGDSK ddPTM_A459_MK2206_30min_R1 1 GLAAEDSGGDSK 12 0 P41227;P41227-2 P41227 NAA10 N-alpha-acetyltransferase 10 1 GLAAEDS(0.989)GGDS(0.011)K 127.78 0.0025448 4901500 2124.4 2435.2 2430.7 1940.4 1885.8 1792 2535.1 2054.5 1944.5 3545.9 TRUE FALSE 1943.708624 2276.668037 2265.710856 2089.849944 1810.684593 1893.461491 2365.988105 2036.537723 2146.637733 3985.192862 0.487732637 0.571281771 0.568532298 0.524403716 0.454353065 0.47512418 0.593694756 0.511026139 0.538653412 1 11.96043383 -10.48313097 0.795706469 1.070936226 0.523332748 0.919611684 0.042157796 14.79110666 4.654626169 2.711053935 0.01507827 3.29E-11 10.48313097 -0.547603478 GLAAEDS(ph)GGDSK ddPTM_A459_MK2206_30min_R2 1 GLAAEDSGGDSK 12 0 P41227;P41227-2 P41227 NAA10 N-alpha-acetyltransferase 10 1 GLAAEDS(0.901)GGDS(0.099)K 147.39 0.00063095 39573000 240900 168680 205810 161260 151870 124260 204480 173720 118570 193340 TRUE FALSE 259343.4892 160303.5965 212671.6027 148084.5422 145906.8207 128988.8014 177631.5304 196425.8005 128883.0043 187031.3316 1.38663125 0.857094879 1.13709078 0.791763288 0.78011967 0.689664134 0.949742104 1.050229385 0.689098469 1 17.51292045 -2.302330684 1.170270247 0.865741888 200 0.505053171 0.146517041 507.9713387 2.345768066 0.043685007 269629.1437 0.004985048 2.302330684 199.1342581 GLAAEDS(ph)GGDSKDLSEVSETTESTDVK ddPTM_A459_MK2206_30min_R1 2 GLAAEDSGGDSKDLSEVSETTESTDVK 27 1 P41227;P41227-2 P41227 NAA10 N-alpha-acetyltransferase 10 1 GLAAEDS(0.918)GGDS(0.079)KDLS(0.003)EVSETTESTDVK;GLAAEDS(0.96)GGDS(0.036)KDLS(0.003)EVSETTESTDVK 111.88 1.41E-09 11684000 1360.63 1695.95 1762.57 1417.82 1356.49 1444.61 1369.73 1247.09 1663.53 1379.38 TRUE FALSE 1244.901274 1585.543347 1642.931659 1527.020742 1302.458131 1526.40257 1278.357811 1236.186824 1836.459897 1550.268008 0.803023262 1.022754349 1.059772665 0.985004357 0.840150299 0.984605605 0.824604394 0.797402009 1.184608008 1 10.59830193 -8.268182882 24.9992565 1.092303995 0.922294749 0.333520755 0.099981262 724.8615948 2687140.841 0.091649966 0.025810966 5.39E-09 8.268182882 -0.170009246 GLAEVQQDGEAEEGAT(ph)SDGEK ddPTM_A459_MK2206_30min_R2 1 GLAEVQQDGEAEEGATSDGEK 21 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.939)S(0.061)DGEK 146.04 4.46E-06 21889000 305670 216620 267780 207410 225020 151430 289580 211760 180860 286730 TRUE FALSE 329072.3302 205862.9658 276707.6515 190463.9395 216184.5842 157192.7748 251557.7982 239437.7591 196590.8759 277374.0236 1.186384817 0.742185455 0.997597569 0.686668265 0.779397369 0.566717722 0.906926304 0.863230651 0.708757343 1 18.08147316 -3.027663718 1.808509209 0.795014489 199.1833909 0.404851485 0.13449817 676.2293948 5.557344758 0.035352488 553897.2067 0.000938288 3.027663718 198.3883764 GLAEVQQDGEAEEGAT(ph)SDGEKKR ddPTM_A459_MK2206_30min_R1 1 GLAEVQQDGEAEEGATSDGEKKR 23 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.5)S(0.5)DGEKKR 71.556 0.0064806 44870000 4715.6 5368.8 5703.7 6190 4097.5 2903 3100.6 5183.9 2731.5 1449.6 TRUE FALSE 4314.513457 5019.290144 5316.548735 6666.754873 3934.287898 3067.365351 2893.764631 5138.577709 3015.4492 1629.187392 2.648261016 3.080855013 3.263313209 4.092073696 2.414877452 1.88275785 1.776201219 3.15407407 1.850891564 1 10.66993684 -6.479285192 8.740486412 2.067129102 3.258314931 0.521118211 0.598714139 0.345417172 66.03672298 0.186632791 0.209824558 3.32E-07 6.479285192 1.191185829 GLAEVQQDGEAEEGATS(ph)DGEK ddPTM_A459_MK2206_30min_R1 1 GLAEVQQDGEAEEGATSDGEK 21 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.1)S(0.9)DGEK 165.01 3.93E-09 31125000 5215.5 6231.1 5761.1 4376 3359.7 3815.9 4779.8 4319 5713.5 6187.4 TRUE FALSE 4771.894337 5825.454257 5370.052583 4713.040278 3225.876035 4031.95296 4460.948263 4281.239438 6307.438771 6953.941824 0.686214302 0.837719729 0.772231451 0.677750893 0.46389172 0.579808267 0.641499221 0.615656493 0.907030707 1 12.76361528 -8.388112024 3.877355066 0.994881239 0.660080307 0.602265159 0.096710567 0.173489485 4.259189588 0.106637256 0.028197421 4.09E-09 8.388112024 -0.334800931 GLAEVQQDGEAEEGATS(ph)DGEK ddPTM_A459_MK2206_30min_R2 1 GLAEVQQDGEAEEGATSDGEK 21 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.263)S(0.737)DGEK 115.81 5.09E-05 25169000 199900 163470 153120 143350 146590 112280 162520 141010 98882 180400 TRUE FALSE 215204.4977 155352.3175 158224.9444 131637.8464 140834.14 116552.8941 141180.9288 159440.4912 107482.5776 174513.5628 1.233167751 0.890201971 0.906662736 0.754312985 0.807009712 0.667872985 0.808996886 0.913628079 0.615898134 1 17.41297964 GLAEVQQDGEAEEGATS(ph)DGEKKR ddPTM_A459_MK2206_30min_R1 1 GLAEVQQDGEAEEGATSDGEKKR 23 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.264)S(0.736)DGEKKR 68.386 0.0036388 36896000 2113.8 2637.9 2914.2 3281.5 2235.5 1729.8 1601.9 2712.6 1512.9 708.14 TRUE FALSE 1934.01021 2466.172231 2716.392223 3534.241699 2146.455301 1827.739781 1495.040174 2688.884024 1670.171369 795.8697294 2.430058763 3.098713445 3.413111623 4.440728888 2.696993267 2.296531346 1.878498602 3.378547927 2.098548679 1 9.636388495 -6.512359822 20.21647494 2.289272832 3.362336985 0.379529841 0.718196055 48.20137599 92640.6572 0.230302211 0.245265067 3.07E-07 6.512359822 1.073064154 GLAEVQQDGEAEEGATS(ph)DGEKKR ddPTM_A459_MK2206_30min_R2 2 GLAEVQQDGEAEEGATSDGEKKR 23 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.29)S(0.71)DGEKKR;GLAEVQQDGEAEEGAT(0.266)S(0.734)DGEKKR 84.113 0.00012157 46843000 61303 151257 129568 115602 195691 96701 149834 81605 142592 101115 TRUE FALSE 65996.40481 143745.7973 133887.7325 106156.9468 188007.1881 100381.0243 130160.6158 92271.05369 154994.3944 97815.62583 0.674702066 1.469558632 1.368776525 1.085275956 1.922056793 1.026226878 1.330673036 0.94331609 1.584556589 1 16.57777733 GLAGPPAS(ph)PGK ddPTM_A459_MK2206_30min_R1 4 GLAGPPASPGK 11 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK 130.44 0.0023944 210458000 32982.7 37961.2 34865.9 30513.7 27596.6 25972.4 29088.2 29296.6 32354.4 30355.4 TRUE FALSE 30177.34817 35489.91898 32499.29985 32863.87046 26497.36899 27442.93484 27147.77925 29040.46291 35717.75566 34116.05612 0.884549728 1.040270272 0.952610106 0.963296295 0.776683239 0.804399393 0.795747878 0.851225675 1.046948555 1 15.05816326 -6.152205606 11.08348237 0.863841549 0.965657096 0.150488662 0.08961606 0.827290134 79.39214237 0.026688196 0.03447051 7.04E-07 6.152205606 0.101815547 GLAGPPAS(ph)PGK ddPTM_A459_MK2206_30min_R2 4 GLAGPPASPGK 11 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK 115.57 0.0061379 368911000 1256990 1227060 1271060 1149660 1221350 992090 1429800 1083820 963860 1410430 TRUE FALSE 1353226.121 1166125.985 1313436.506 1055729.1 1173393.662 1029844.68 1242065.543 1225478.995 1047694.801 1364407.785 0.991804749 0.854675558 0.962642196 0.773763615 0.860002175 0.754792439 0.910333081 0.89817649 0.767875127 1 20.37984346 GLAPDLPEDLYHLIK ddPTM_A459_MK2206_30min_R1 1 GLAPDLPEDLYHLIK 15 0 P62277;J3KMX5 P62277 RPS13 40S ribosomal protein S13 0 204.18 1.01E-05 4959200 2380 2886.6 2761 2566.4 2402.8 2212 2496.8 2551.4 2123 2440 FALSE TRUE 2177.568502 2698.681815 2573.591013 2764.064573 2307.091388 2337.241528 2330.243028 2529.093379 2343.693447 2742.285621 0.794070641 0.984099466 0.938483939 1.007941898 0.841302368 0.852296898 0.84974483 0.922257463 0.85464965 1 11.42116313 -4.736048907 24.79155114 0.911386148 0.794070028 0.255395537 0.06223913 3562.856558 3478612.655 0.016066985 1.164657099 1.84E-05 4.736048907 -0.11731612 GLAPPPPTS(ph)ASPSLLSNRPPPPAR ddPTM_A459_MK2206_30min_R2 2 GLAPPPPTSASPSLLSNRPPPPAR 24 1 Q8TF74-2;Q8TF74 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 GLAPPPPT(0.065)S(0.441)AS(0.441)PS(0.051)LLS(0.003)NRPPPPAR;GLAPPPPT(0.067)S(0.35)AS(0.35)PS(0.217)LLS(0.016)NRPPPPAR 78.088 0.00018175 16742000 45626 57196 45426 46172 57454 47444 47432 36756 36362 45087 TRUE FALSE 49119.16164 54355.72981 46940.48017 42399.5999 55198.06728 49249.51467 41204.12142 41560.1354 39524.70103 43615.81488 1.126177781 1.246239007 1.076226142 0.972115276 1.265551668 1.129166446 0.944705986 0.952868484 0.906201137 1 15.41256372 -7.254954769 7.404578917 0.946715926 1.136904185 0.561734809 0.08001193 0.105453057 44.61282557 0.033026094 0.024173037 5.56E-08 7.254954769 0.190188259 GLAS(ph)PTAITPVASPICGK ddPTM_A459_MK2206_30min_R2 2 GLASPTAITPVASPICGK 18 0 O95425-3;O95425;A0A6I8PIX7;A0A0J9YWY6;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 GLAS(0.897)PT(0.103)AITPVASPICGK;GLAS(0.5)PT(0.5)AITPVASPICGK 210.09 1.22E-11 12483100 89513 102074 79954 88095 81399 75710 87916 61064 65968 75726 TRUE FALSE 96366.1841 97005.15359 82619.62645 80897.3567 78202.86626 78591.1971 76372.52359 69045.27446 71705.7774 73255.06682 1.315488311 1.32421084 1.127834975 1.104324386 1.067542078 1.072843156 1.042556193 0.942532407 0.978850754 1 16.16064093 -4.651733121 0.441413326 0.975701943 1.671463172 0.909775947 0.037033281 1.59595553 0.222726199 0.028259782 0.599084311 2.23E-05 4.651733121 0.69576123 GLAT(ph)SLQNDLQEVPK ddPTM_A459_MK2206_30min_R1 1 GLATSLQNDLQEVPK 15 0 Q8N0X7 Q8N0X7 SPG20 Spartin 1 GLAT(0.986)S(0.014)LQNDLQEVPK 160.79 8.18E-05 0 1059.8 977.75 919.06 863.78 982.22 720.64 864.54 835.09 735.4 802.22 TRUE FALSE 969.6584448 914.0982973 856.6767678 930.3084853 943.0960975 761.442014 806.868114 827.7888962 811.8474617 901.6050701 1.075480248 1.013856651 0.950168534 1.031835907 1.046019071 0.844540519 0.894924109 0.91812804 0.900446868 1 9.816351818 -6.750667442 24.99994605 0.905448169 1.019330142 0.58739687 0.046670305 150.3007812 348823.5975 0.015404517 0.015257684 1.78E-07 6.750667442 0.113881973 GLAT(ph)SLQNDLQEVPK ddPTM_A459_MK2206_30min_R2 2 GLATSLQNDLQEVPK 15 0 Q8N0X7 Q8N0X7 SPG20 Spartin 1 GLAT(0.768)S(0.232)LQNDLQEVPK;GLAT(0.994)S(0.006)LQNDLQEVPK 142.57 0.00089075 3826000 38946 49685 56096 50984 44899 37166 55964 33017 37263 39725 TRUE FALSE 41927.7357 47217.71515 57966.21264 46818.44411 43136.03966 38580.37817 48615.85958 37332.43526 40504.06838 38428.7765 1.091050497 1.22870722 1.508406406 1.218317323 1.122493183 1.003945004 1.265089966 0.971470826 1.05400359 1 15.22989942 -6.256438747 3.340384839 1.071006368 1.28173117 0.376799859 0.122700245 0.271528952 6.396475922 0.039816539 0.049582631 5.54E-07 6.256438747 0.210724802 GLCAIAQAESLR ddPTM_A459_MK2206_30min_R2 1 GLCAIAQAESLR 12 0 P23396;P23396-2;F2Z2S8;H0YF32;H0YCJ7 P23396 RPS3 40S ribosomal protein S3 0 139.43 0.040239 0 9393.1 12947 15535 14028 11458 13027 14596 13714 12558 12330 FALSE TRUE 10112.24296 12304.07081 16052.92915 12881.86753 11008.10135 13522.75161 12679.52767 15506.46689 13650.27214 11927.67311 0.847796789 1.031556674 1.345855893 1.079998371 0.922904346 1.133729227 1.06303447 1.300041236 1.144420376 1 13.542025 GLCTSPAEHQYFMTEY(ph)VATR ddPTM_A459_MK2206_30min_R1 1 GLCTSPAEHQYFMTEYVATR 20 0 Q13164-2;Q13164;I3L0J8;C9JUK9;Q13164-4;Q13164-3 Q13164-2 MAPK7 Mitogen-activated protein kinase 7 1 GLCTSPAEHQYFMT(0.4)EY(0.523)VAT(0.077)R 117.29 0.001719 6675400 1591.4 1094.6 1649.8 1223 2129.8 1759.7 2026.8 1576.8 1211.7 1331.9 TRUE FALSE 1456.043073 1023.341341 1537.816173 1317.195672 2044.965556 1859.332693 1891.59587 1563.014204 1337.660551 1496.905827 0.972701854 0.683637756 1.027329939 0.879945584 1.366128395 1.242117346 1.26367059 1.04416335 0.893617038 1 10.54776775 -6.221633679 24.15589534 1.148952085 0.885843634 0.375246245 0.15357532 378.9519691 229964.6745 0.047210182 0.060946855 6.00E-07 6.221633679 -0.263108451 GLCTSPAEHQYFMTEYVAT(ph)R ddPTM_A459_MK2206_30min_R1 1 GLCTSPAEHQYFMTEYVATR 20 0 Q13164-2;Q13164;I3L0J8;C9JUK9;Q13164-4;Q13164-3 Q13164-2 MAPK7 Mitogen-activated protein kinase 7 1 GLCTSPAEHQYFMT(0.086)EY(0.321)VAT(0.593)R 98.227 0.0028287 0 1078.9 643.77 860.8 862.49 1225.1 870.41 1453.8 975.65 783.88 572.78 TRUE FALSE 987.1338895 601.860456 802.3712943 928.9191292 1176.301673 919.691862 1356.819655 967.1199949 865.3671311 643.7403107 1.533434947 0.934942936 1.246420771 1.443002891 1.827292238 1.428669056 2.107712741 1.502344935 1.344279854 1 9.330335002 -5.867719396 3.609854461 1.586760159 1.205412503 0.140335707 0.308042644 0.340614765 8.530900049 0.086361639 0.136119534 1.36E-06 5.867719396 -0.381347656 GLDDDRGPR ddPTM_A459_MK2206_30min_R2 1 GLDDDRGPR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 104.06 0.041389 14773000 92019 110260 103750 121550 103120 115800 116710 94133 105120 91658 FALSE TRUE 99064.04539 104784.6487 107208.9732 111618.9762 99070.99066 120206.8501 101385.8368 106436.5063 114263.1476 88667.20697 1.117256862 1.181774551 1.20911639 1.258852963 1.117335191 1.355708094 1.14344232 1.20040441 1.288674263 1 16.43611301 -10.62688443 4.245637933 0.999968003 1.208362619 0.426999874 0.072306049 9532526.027 11953748.86 2241.935898 0.016651193 2.36E-11 10.62688443 0.208394616 GLDDDRGPWR ddPTM_A459_MK2206_30min_R1 1 GLDDDRGPWR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 108.43 0.030104 8821300 3337.9 3301.1 2847.1 2806.9 3562.4 3026.1 3398.4 3125.4 3269.7 3033.9 FALSE TRUE 3053.994077 3086.19779 2653.846784 3023.087924 3420.502064 3197.435167 3171.698937 3098.074957 3609.597016 3409.762437 0.895661834 0.905106396 0.778308411 0.886597814 1.00314967 0.9377296 0.930181793 0.908589679 1.058606599 1 11.73545551 -6.104134577 5.627015312 0.964043659 0.859422699 0.504907245 0.051705934 0.204668109 9.156226367 0.015449526 0.02020245 7.87E-07 6.104134577 -0.10462096 GLDDDRGPWR ddPTM_A459_MK2206_30min_R2 2 GLDDDRGPWR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 119.62 0.015061 28962000 84044 110727 98853 104518 103785 118929 112414 82545 89767 97619 FALSE TRUE 90478.47326 105228.4582 102148.7097 95978.54506 99709.87942 123454.9264 97653.90677 93333.91492 97574.7714 94433.70002 0.958116363 1.114310444 1.081697632 1.016359044 1.055871785 1.307318536 1.034100186 0.988353892 1.033262187 1 16.52701418 -10.58804915 5.87489156 0.999999776 1.06959358 0.042623254 0.091262408 2.76E-07 4.39E-08 0.091176938 0.022113584 2.58E-11 10.58804915 0.069593804 GLDDTEEPS(ph)PPEDK ddPTM_A459_MK2206_30min_R1 2 GLDDTEEPSPPEDK 14 0 O94806;O94806-2 O94806 PRKD3 Serine/threonine-protein kinase D3 1 GLDDTEEPS(1)PPEDK;GLDDT(0.008)EEPS(0.992)PPEDK 185.32 9.73E-15 3443700 3205.9 3079.4 3346.5 2874.6 2349.4 2295.82 2695.7 2693.3 2811 2861 TRUE FALSE 2933.22137 2878.9305 3119.348904 3096.00219 2255.818423 2425.807344 2515.874772 2669.752762 3103.213509 3215.442279 0.912229521 0.895345103 0.970115036 0.962854227 0.701557741 0.754424161 0.78243506 0.830290993 0.965096941 1 11.65080148 -6.218733317 24.99955069 0.823428137 0.934792297 0.212926699 0.087572539 672.2284276 393513.0913 0.02626781 0.033911395 6.04E-07 6.218733317 0.111364161 GLDDTEEPS(ph)PPEDK ddPTM_A459_MK2206_30min_R2 2 GLDDTEEPSPPEDK 14 0 O94806;O94806-2 O94806 PRKD3 Serine/threonine-protein kinase D3 1 GLDDT(0.002)EEPS(0.998)PPEDK;GLDDTEEPS(1)PPEDK 188.92 4.46E-15 2761500 38238 43013 39082 37533 42294 29794 44683 36066 30172 39520 TRUE FALSE 41165.53068 40877.03697 40384.97437 34466.43384 40633.32505 30927.83155 38816.06843 40779.95003 32796.30602 38230.46564 1.076772935 1.069226762 1.056355807 0.901543658 1.062851953 0.808983909 1.0153177 1.066687244 0.857857875 1 15.22243515 -5.645074346 7.213791278 0.962417701 1.070244875 0.280550711 0.079644193 0.291139943 17.14323304 0.020965275 0.036461689 2.26E-06 5.645074346 0.107827173 GLDIESYDS(ph)LERPLR ddPTM_A459_MK2206_30min_R1 1 GLDIESYDSLERPLR 15 1 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 GLDIESYDS(1)LERPLR 105.02 0.0026583 2811900 1100 1140.2 1209.6 954.64 1191.9 1267.8 1053.7 908.22 931.64 1410.8 TRUE FALSE 1006.439224 1065.972773 1127.495722 1028.166538 1144.424099 1339.58174 983.4095956 900.2795283 1028.487312 1585.580555 0.634744933 0.672291779 0.711093308 0.648447999 0.721769762 0.844852528 0.62022052 0.567791731 0.648650306 1 10.63079546 -11.60141466 2.553984137 1.513661037 0.676354594 0.656522207 0.070634252 12051027.39 3533642.76 36086592.32 0.018841388 2.50E-12 11.60141466 -0.837306443 GLDIESYDS(ph)LERPLRK ddPTM_A459_MK2206_30min_R1 2 GLDIESYDSLERPLRK 16 2 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 GLDIES(0.018)YDS(0.982)LERPLRK;GLDIES(0.031)Y(0.004)DS(0.966)LERPLRK 68.123 0.019046 22984900 10713 10012.1 9916 10039.5 11471.8 10922.5 10967.5 10602.8 8714.5 7806.7 TRUE FALSE 9801.803094 9360.31047 9242.929548 10812.74403 11014.85391 11540.92251 10235.87809 10510.10084 9620.40346 8773.852934 1.117160633 1.066841505 1.053463013 1.232382639 1.255418115 1.31537679 1.166634335 1.197888877 1.096485607 1 13.09899481 -5.758241897 24.99927779 1.196994887 1.077923678 0.217952837 0.084126213 105.768165 826924.1783 0.022977176 0.037764598 1.74E-06 5.758241897 -0.11907121 GLDS(ph)GAETEEEKDTWEEK ddPTM_A459_MK2206_30min_R2 1 GLDSGAETEEEKDTWEEK 18 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GLDS(0.606)GAET(0.384)EEEKDT(0.01)WEEK 56.748 0.03451 6079400 16791 21875 16626 14598 16555 9550 19798 14236 17059 19566 TRUE FALSE 18076.53187 20788.71931 17180.30254 13405.2967 15904.96752 9913.431942 17198.49882 16096.69408 18542.76098 18927.56302 0.955037468 1.098330476 0.907686981 0.708242085 0.840307202 0.523756383 0.908648345 0.850436692 0.979669753 1 14.20820105 -5.507686373 6.847823278 0.814105334 1.022064716 0.248892536 0.133703121 0.194132836 43.62739019 0.03577391 0.069549558 3.11E-06 5.507686373 0.207959382 GLDSGAET(ph)EEEKDTWEEK ddPTM_A459_MK2206_30min_R1 1 GLDSGAETEEEKDTWEEK 18 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GLDS(0.005)GAET(0.992)EEEKDT(0.002)WEEK 84.859 0.010871 3783900 849.94 1025.7 1159.5 1131.9 714.87 567.41 791.96 1060.6 1098.6 1057 TRUE FALSE 777.6481398 958.9267436 1080.796371 1219.079134 686.3952141 599.5362639 739.1297934 1051.327286 1212.803401 1187.94914 0.654614001 0.807211952 0.909800205 1.026204821 0.577798486 0.504681761 0.622189763 0.884993516 1.020921991 1 10.21425736 -7.984724582 5.030455061 0.996383037 0.7359561 0.373044445 0.147845117 0.22577864 16.06514957 0.104065575 0.044717321 1.04E-08 7.984724582 -0.260426937 GLEERLS(ph)PPLPHEER ddPTM_A459_MK2206_30min_R2 1 GLEERLSPPLPHEER 15 1 Q9UPV0 Q9UPV0 CEP164 Centrosomal protein of 164 kDa 1 GLEERLS(1)PPLPHEER 58.577 0.038776 2452700 6479.1 9933.4 8366.1 10498 10384 9462.4 9398.1 7930.7 7893.8 8106.9 TRUE FALSE 6975.144878 9440.121801 8645.021598 9640.279819 9976.271985 9822.498263 8164.118181 8967.26972 8580.388455 7842.372517 0.889417694 1.203732898 1.102347737 1.229255534 1.272098713 1.252490651 1.041026572 1.143438379 1.094106208 1 12.93707446 -10.63566511 5.196505918 0.999996445 1.144945107 0.119361863 0.108992228 4.51E-06 7.70E-07 0.106030667 0.025715583 2.31E-11 10.63566511 0.144948662 GLEGERPAR ddPTM_A459_MK2206_30min_R1 1 GLEGERPAR 9 1 P46783;A0A2R8Y6L3;F6U211;A0A2R8Y7H1;S4R435;A0A2R8YFH6;A0A1W2PQS6 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 0 107.69 0.035058 13257000 2027.9 1976.1 2237 1747.6 2417.4 1807 1994.7 2162.7 1696.1 1872.1 FALSE TRUE 1855.416456 1847.455531 2085.158673 1882.200455 2321.109839 1909.310778 1861.637203 2143.791742 1872.415665 2104.029882 0.881839404 0.878055748 0.991030922 0.89456926 1.103173419 0.907454212 0.88479599 1.018897954 0.889918761 1 11.03893948 -5.247296067 23.49321696 0.959943298 0.879947536 0.192990578 0.066444023 583.9581313 969991.398 0.016354443 0.042740774 5.66E-06 5.247296067 -0.079995762 GLEGNANS(ph)PAHLR ddPTM_A459_MK2206_30min_R2 2 GLEGNANSPAHLR 13 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 GLEGNANS(1)PAHLR;GLEGNANS(1)PAHLR 124.16 0.0023127 16087100 36615 43364 38215 47396 45403 47120 41645 34895 39603 48568 TRUE FALSE 39418.27255 41210.60682 39489.06903 43523.59519 43620.25009 48913.18462 36176.96148 39455.89631 43047.59735 46983.23014 0.838986005 0.877134388 0.840492851 0.926364472 0.928421693 1.041077518 0.769997324 0.839786796 0.916233244 1 15.51985828 -5.760215321 24.99802823 0.910205272 0.854697406 0.142601834 0.071686123 79.34807259 1620376.209 0.020757739 0.0335105 1.74E-06 5.760215321 -0.055507866 GLEPADLAGSAPAEEEGRGS(ph)PASGSPDVEGAR ddPTM_A459_MK2206_30min_R1 1 GLEPADLAGSAPAEEEGRGSPASGSPDVEGAR 32 1 E7EUN2 E7EUN2 AGAP1 1 GLEPADLAGS(0.006)APAEEEGRGS(0.917)PAS(0.057)GS(0.02)PDVEGAR 67.658 0.0053811 0 542.82 694.27 615.5 429.52 818.18 694.77 595.7 447.32 519.22 671.44 TRUE FALSE 496.6503085 649.0728968 573.7215749 462.6017048 785.5901581 734.107277 555.9619399 443.4091284 573.194777 754.6230563 0.658143565 0.860128632 0.760275703 0.61302355 1.041036517 0.972813209 0.736741258 0.587590221 0.759577609 1 9.55961237 -2.648288569 19.77130253 0.792766721 0.309908942 0 0.154713387 0 0 0.036417025 0 0.002247561 2.648288569 -0.482857779 GLEYLYLNVHDEDRDDQTR ddPTM_A459_MK2206_30min_R1 1 GLEYLYLNVHDEDRDDQTR 19 1 Q9Y6G9;C9JGM7;C9JLW1 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 0 71.685 0.011132 5466500 2921 2738.6 2879.3 3015.8 3401.2 2986.8 3029 2738.9 2542.6 2257.1 FALSE TRUE 2672.553611 2560.316642 2683.861138 3248.077439 3265.723002 3155.910035 2826.940937 2714.954086 2806.912369 2536.726588 1.053544211 1.009299407 1.058001738 1.280420781 1.287376817 1.244087577 1.114405056 1.070258852 1.106509618 1 11.30875232 -3.735016693 10.73912791 1.1315434 1.121298656 0 0.103696885 0 0 0.026386269 0 0.00018407 3.735016693 -0.010244744 GLFDEYGSK ddPTM_A459_MK2206_30min_R2 1 GLFDEYGSK 9 0 P14625;Q58FF3 P14625 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein 0 155.07 0.00046939 0 19527 30892 23375 22613 21633 23352 28991 18188 20688 21261 FALSE TRUE 21022.00213 29357.9482 24154.31083 20765.44556 20783.57972 24240.67672 25184.44688 20565.23405 22487.40484 20567.25531 1.022110234 1.427412057 1.174406136 1.009636203 1.010517904 1.17860533 1.224492354 0.999901724 1.093359542 1 14.32806166 -1.52287876 0.10235883 0.940837938 1.730973162 0.125277546 0.123633152 246.7723787 1.790750198 1.525848424 27.40415833 0.029999999 1.52287876 0.790135223 GLFIIDDK ddPTM_A459_MK2206_30min_R1 2 GLFIIDDK 8 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5;Q13162;H7C3T4 Q06830;Q13162 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 0 ; 151.27 0.016158 78373000 11890.1 12745.7 12066.1 12080.4 10965.3 10983.2 11686.6 11295.9 9803.3 10376.5 FALSE TRUE 10878.78456 11915.95261 11247.08675 13010.8345 10528.52888 11605.05929 10907.00824 11197.14114 10822.38812 11662.01916 0.932838851 1.021774399 0.964420191 1.115658817 0.902804972 0.99511578 0.935258988 0.960137433 0.928002944 1 13.50952998 GLFIIDDK ddPTM_A459_MK2206_30min_R2 1 GLFIIDDK 8 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5;Q13162;H7C3T4 Q06830;Q13162 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 0 151.27 0.016158 29753000 95723 101330 100870 95464 95859 84264 108620 80731 76060 96222 FALSE TRUE 103051.6265 96298.09955 104232.9555 87664.28583 92095.09401 87470.72557 94358.06352 91282.81889 82675.56131 93082.28402 1.107102469 1.034548094 1.119793702 0.941793455 0.989394437 0.939714001 1.013705933 0.980668017 0.888198675 1 16.50621899 -5.765566793 24.99960382 0.965996073 1.081888096 0.664371762 0.039796843 61.11923548 370200.2973 0.010717401 0.016565022 1.72E-06 5.765566793 0.115892023 GLFQDEDS(ph)CSDCSYR ddPTM_A459_MK2206_30min_R1 3 GLFQDEDSCSDCSYR 15 0 Q8NEM2 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 1 GLFQDEDS(0.771)CS(0.229)DCSYR;GLFQDEDS(0.885)CS(0.048)DCS(0.067)YR;GLFQDEDS(0.49)CS(0.49)DCS(0.02)YR 205.98 2.15E-06 8844100 4631.55 4215.29 4483.9 3685.47 4816.56 4055.01 4246.71 4172.28 3680.6 3542.62 TRUE FALSE 4237.612351 3940.873855 4179.545361 3969.325538 4624.706216 4284.601162 3963.419724 4135.802196 4063.211541 3981.506511 1.064323853 0.989794653 1.049739678 0.996940612 1.161546817 1.07612562 0.995457301 1.038753091 1.020521134 1 11.9590987 -7.260998314 24.99730651 1.016912307 1.055156157 0.172534238 0.04557372 92.1552911 5223130.236 0.019318399 0.013984972 5.48E-08 7.260998314 0.03824385 GLFQDEDS(ph)CSDCSYR ddPTM_A459_MK2206_30min_R2 4 GLFQDEDSCSDCSYR 15 0 Q8NEM2 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 1 GLFQDEDS(0.911)CS(0.088)DCSYR;GLFQDEDS(0.93)CS(0.07)DCSYR;GLFQDEDS(0.912)CS(0.088)DCSYR;GLFQDEDS(0.643)CS(0.357)DCSYR 138.28 0.00039823 21528700 76065 90358.8 85562.9 103177 100780 104154 105969 83101.7 79905 90904.5 TRUE FALSE 81888.59488 85871.71339 88415.52438 94747.10905 96822.87082 108117.6535 92055.14301 93963.37752 86854.99246 87938.29361 0.931205184 0.976499655 1.005426882 1.077427195 1.101031949 1.229471815 1.046815207 1.068514906 0.987681122 1 16.42420392 -5.505112498 1.942808975 1.083170585 0.947235876 0.364323701 0.0633976 0.376407089 2.756862809 0.019587169 0.053267777 3.13E-06 5.505112498 -0.135934709 GLFQDEDSCS(ph)DCSYR ddPTM_A459_MK2206_30min_R1 1 GLFQDEDSCSDCSYR 15 0 Q8NEM2 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 1 GLFQDEDS(0.098)CS(0.902)DCSYR 236.31 6.96E-20 3920400 770.18 743.23 1102.7 856.47 1037.9 802.65 835.87 760.69 695.33 629.36 TRUE FALSE 704.6721466 694.8455919 1027.851796 922.4354678 996.5582452 848.0953494 780.1106374 754.0393675 767.6120418 707.3298682 0.996242599 0.982350136 1.453143494 1.304109312 1.408901688 1.199009666 1.102895088 1.066036373 1.08522498 1 9.466239373 -7.297798728 3.147869458 1.061912588 1.23719762 0.232035213 0.144484227 0.441060789 8.878696875 0.072074619 0.048039799 5.04E-08 7.297798728 0.175285032 GLFS(ph)DEEDSEDLFSSQSASK ddPTM_A459_MK2206_30min_R1 2 GLFSDEEDSEDLFSSQSASK 20 0 F8W7U3;Q641Q2-2;Q641Q2;E7ESD2;A0A087WYF6 F8W7U3 FAM21A WASH complex subunit FAM21A 1 GLFS(1)DEEDSEDLFSSQSASK;GLFS(1)DEEDSEDLFSSQSASK 219.61 1.13E-19 10762500 5879.3 5174.9 5337 5248.7 5370.9 4724 5580.7 4968.3 4604.7 4318.9 TRUE FALSE 5379.234662 4838.013069 4974.73931 5652.955783 5156.96568 4991.468798 5208.421686 4924.862677 5083.375043 4853.957938 1.108216167 0.996715079 1.024883069 1.164607493 1.06242488 1.028329636 1.073025715 1.014607613 1.047263925 1 12.24494589 -7.762223414 24.99999999 1.02320182 1.063521781 0.167883196 0.045489758 44.76426428 1427185.44 0.023949653 0.012579657 1.73E-08 7.762223414 0.040319961 GLFS(ph)DEEDSEDLFSSQSASNLK ddPTM_A459_MK2206_30min_R1 5 GLFSDEEDSEDLFSSQSASNLK 22 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5 A0A0A0MR88 FAM21C WASH complex subunit FAM21C 1 GLFS(1)DEEDSEDLFSSQSASNLK;GLFS(0.994)DEEDS(0.006)EDLFSSQSASNLK;GLFS(1)DEEDSEDLFSSQSASNLK;GLFS(1)DEEDSEDLFSSQSASNLK;GLFS(1)DEEDSEDLFSSQSASNLK 210.16 1.13E-23 31088800 5128.67 4812.86 4842.74 4504.22 5432.31 4820.03 5328.02 4618.61 4148.35 4337.48 TRUE FALSE 4692.449685 4499.541939 4514.028301 4851.135805 5215.92959 5092.935933 4972.597507 4578.22998 4579.585828 4874.839769 0.96258542 0.923013299 0.925984959 0.995137489 1.069969442 1.044739145 1.020053529 0.939154967 0.939433098 1 12.25113908 -5.811106604 6.134184812 1.004584349 0.935786402 0.35286651 0.039623495 0.227297502 19.20746117 0.012812044 0.019491587 1.54E-06 5.811106604 -0.068797946 GLFS(ph)DEEDSEDLFSSQSASNLK ddPTM_A459_MK2206_30min_R2 6 GLFSDEEDSEDLFSSQSASNLK 22 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5 A0A0A0MR88 FAM21C WASH complex subunit FAM21C 1 GLFS(1)DEEDSEDLFSSQSASNLK;GLFS(1)DEEDSEDLFSSQSASNLK;GLFS(1)DEEDSEDLFSSQSASNLK;GLFS(1)DEEDSEDLFSSQSASNLK;GLFS(1)DEEDSEDLFSSQSASNLK;GLFS(0.999)DEEDS(0.001)EDLFSSQSASNLK 208.61 4.68E-36 13433700 129146.8 160359.8 139406 165634.5 157910.9 140619.6 159631.9 127731.6 138380.1 143833.8 TRUE FALSE 139034.3783 152396.5655 144053.7265 152101.6315 151710.5246 145970.9774 138672.0398 144426.5587 150416.151 139140.5149 0.999237199 1.095270961 1.03531115 1.093151277 1.0903404 1.049090393 0.996633079 1.037990687 1.081037763 1 17.08618304 -7.002291028 24.96868597 1.030764195 1.065154859 0.168785963 0.035002711 157.8275351 1720103.597 0.012239024 0.010610656 9.95E-08 7.002291028 0.034390664 GLGACTLLGS(ph)PR ddPTM_A459_MK2206_30min_R1 1 GLGACTLLGSPR 12 0 K7ER53;O95644-8;O95644-11;O95644-3;O95644-10;O95644-2;O95644-5;O95644-4;O95644-6;O95644 K7ER53 NFATC1 "Nuclear factor of activated T-cells, cytoplasmic 1" 1 GLGACTLLGS(1)PR 94.538 0.018863 11258000 2712.9 2824.3 2578.7 2181.9 2657 2743.3 2511.6 2511 2414.9 2294.3 TRUE FALSE 2482.153609 2640.437557 2403.665029 2349.950316 2551.166064 2898.623275 2344.055747 2489.046592 2665.937497 2578.535205 0.962621571 1.024006789 0.932182358 0.911350875 0.989385779 1.124135621 0.909064861 0.965294787 1.033896102 1 11.33233603 -6.511117499 24.98056915 1.004725277 0.959213158 0.138468948 0.057505712 1334.190086 2833789.851 0.01907093 0.020500486 3.08E-07 6.511117499 -0.045512119 GLGACTLLGS(ph)PR ddPTM_A459_MK2206_30min_R2 3 GLGACTLLGSPR 12 0 K7ER53;O95644-8;O95644-11;O95644-3;O95644-10;O95644-2;O95644-5;O95644-4;O95644-6;O95644 K7ER53 NFATC1 "Nuclear factor of activated T-cells, cytoplasmic 1" 1 GLGACTLLGS(1)PR;GLGACTLLGS(1)PR;GLGACTLLGS(1)PR 152.96 0.00048183 23705100 61416 76980 75919 83750 73647 73423 88751 57439 67206 76871 TRUE FALSE 66118.05618 73157.28514 78450.10157 76907.3571 70755.24873 76217.16371 77097.88709 64946.47452 73051.4564 74362.70557 0.889129244 0.983789987 1.054965671 1.034219459 0.95148836 1.024938013 1.03678163 0.873374281 0.982366844 1 16.18229164 -10.51227041 9.42955218 1 0.983903466 0.007311441 0.058577673 0 1.30E-17 0.058419746 0.014168869 3.07E-11 10.51227041 -0.016096534 GLGHPPS(ph)SPLLK ddPTM_A459_MK2206_30min_R2 1 GLGHPPSSPLLK 12 0 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 GLGHPPS(0.713)S(0.287)PLLK 112.64 0.0065658 0 55034 62228 52758 63924 57213 57532 51598 45855 34588 46922 TRUE FALSE 59247.44535 59137.84801 54516.92539 58701.20472 54966.53015 59721.42057 44823.12062 51848.40594 37596.40172 45390.93898 1.305270318 1.302855798 1.201053043 1.293236184 1.210958208 1.315712385 0.987490491 1.142263348 0.828279885 1 15.47011671 -7.482664254 1.373988899 0.953166557 1.27299052 0.713423582 0.08523115 0.228539811 0.823428004 0.05551535 0.026836489 3.29E-08 7.482664254 0.319823963 GLGKPGGQGDAIQLS(ph)PK ddPTM_A459_MK2206_30min_R2 1 GLGKPGGQGDAIQLSPK 17 1 Q5VV41 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 GLGKPGGQGDAIQLS(1)PK 69.485 0.018792 6449100 66989 74976 85478 65829 63456 46963 87665 56670 63727 77427 TRUE FALSE 72117.72935 71252.80087 88327.79386 60450.56012 60964.3986 48750.20987 76154.4802 64076.96358 69269.85927 74900.56333 0.962846288 0.951298598 1.179267417 0.80707751 0.813937785 0.650865731 1.016741087 0.855493747 0.924824276 1 16.19268895 -5.787856574 24.99927348 0.85599409 1.023153733 0.298191785 0.114335505 260.0622183 246102.578 0.032460142 0.048162464 1.63E-06 5.787856574 0.167159643 GLGLGANLTEAQALT(ph)PTGPSR ddPTM_A459_MK2206_30min_R1 2 GLGLGANLTEAQALTPTGPSR 21 0 Q92917 Q92917 GPKOW G patch domain and KOW motifs-containing protein 1 GLGLGANLT(0.001)EAQALT(0.999)PTGPSR;GLGLGANLTEAQALT(0.986)PT(0.011)GPS(0.002)R 229.15 1.76E-24 10384700 3584.4 3125.8 3254.8 2708.9 3017.9 3276.9 3341.9 2706.9 2720.3 2775.7 TRUE FALSE 3279.527958 2922.309852 3033.873244 2917.539947 2897.690652 3462.435246 3118.967949 2683.233859 3003.08492 3119.574671 1.051274069 0.936765476 0.972527849 0.935236452 0.928873631 1.109906193 0.999805511 0.860128108 0.962658451 1 11.60713363 GLGLGANLTEAQALT(ph)PTGPSR ddPTM_A459_MK2206_30min_R2 1 GLGLGANLTEAQALTPTGPSR 21 0 Q92917 Q92917 GPKOW G patch domain and KOW motifs-containing protein 1 GLGLGANLT(0.008)EAQALT(0.973)PT(0.01)GPS(0.01)R 93.029 0.0012774 9299600 12017 14377 11337 13889 10507 13293 11263 12517 9867.7 12958 TRUE FALSE 12937.03076 13663.05909 11714.96992 12754.22427 10094.44239 13798.87443 9784.154571 14153.01488 10725.97471 12535.18152 1.032057712 1.089976963 0.934567234 1.017474238 0.805288888 1.100811696 0.780535531 1.129063417 0.855669676 1 13.61369527 -5.264643368 24.90855814 0.953693063 1.061017341 0.132585567 0.110575792 457.0902489 3553558.492 0.026093692 0.058220242 5.44E-06 5.264643368 0.107324278 GLGPPS(ph)PPAPPR ddPTM_A459_MK2206_30min_R1 5 GLGPPSPPAPPR 12 0 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 1 GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR 150.51 0.00054734 519382000 8967 8985.1 8711.3 6784.2 8378.9 8295.1 8897.6 8096.1 8275.5 7767.7 TRUE FALSE 8204.309562 8400.168357 8120.001227 7306.720259 8045.15067 8764.761394 8304.057339 8025.316651 9135.767839 8730.021319 0.93978116 0.962216248 0.930123871 0.836964767 0.921549945 1.00397938 0.951206994 0.919278013 1.046477151 1 13.09176946 -6.694479451 8.262724116 0.977007885 0.916458596 0.356202757 0.043865929 0.353133666 38.84907029 0.015168253 0.015132373 2.02E-07 6.694479451 -0.060549289 GLGPPS(ph)PPAPPR ddPTM_A459_MK2206_30min_R2 4 GLGPPSPPAPPR 12 0 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 1 GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR 130.69 0.0021322 577000000 224867 282109 242868 289197 327300 350370 321364 251671 287204 229967 TRUE FALSE 242082.9904 268099.8773 250965.0979 265568.68 314448.5574 363703.5759 279168.5208 284565.2638 312184.4848 222463.1956 1.088193441 1.205142615 1.12811963 1.193764565 1.413485752 1.634893245 1.254897557 1.279156595 1.403308461 1 17.76320715 -6.131985457 4.839256806 1.355605316 1.149243552 0.238516563 0.15288208 0.304394761 10.67923106 0.045295593 0.059426739 7.38E-07 6.131985457 -0.206361765 GLGPS(ph)PAGDGPSGSGK ddPTM_A459_MK2206_30min_R1 1 GLGPSPAGDGPSGSGK 16 0 Q92934;F5GYS3;A8MXU7 Q92934 BAD Bcl2-associated agonist of cell death 1 GLGPS(0.997)PAGDGPS(0.002)GSGK 102.29 0.0050172 6961300 4364.3 4645.4 5070 3942.5 4335.3 3757.1 4858.2 4623.9 4307.9 4488.5 TRUE FALSE 3993.093367 4342.983616 4725.862526 4246.152033 4162.615821 3969.823755 4534.118342 4583.47373 4755.721621 5044.569266 0.791562799 0.860922586 0.936821813 0.841727372 0.82516774 0.786949994 0.898811792 0.908595658 0.94274087 1 12.30051537 -8.143577222 1.225671909 0.993039083 0.846591572 0.606614219 0.041626271 0.336025113 0.948103405 0.041639186 0.01377284 7.18E-09 8.143577222 -0.146447511 GLGPS(ph)PAGDGPSGSGK ddPTM_A459_MK2206_30min_R2 2 GLGPSPAGDGPSGSGK 16 0 Q92934;F5GYS3;A8MXU7 Q92934 BAD Bcl2-associated agonist of cell death 1 GLGPS(0.996)PAGDGPS(0.004)GSGK;GLGPS(1)PAGDGPSGSGK 164.01 2.77E-05 14693500 79173 99702 92764 110896 93344 92047 98118 76109 83983 93227 TRUE FALSE 85234.54575 94750.94366 95856.70546 101835.4421 89678.84554 95549.91309 85234.98874 86056.70762 91287.68953 90185.01062 0.945107675 1.050628514 1.062889551 1.129183679 0.994387481 1.05948774 0.945112587 0.954224067 1.012226853 1 16.46060005 -7.254749626 24.9226451 0.974076215 1.043733781 0.28172635 0.048463424 641.8173133 2391094.113 0.01914971 0.01447154 5.56E-08 7.254749626 0.069657565 GLGS(ph)SPDLELLLR ddPTM_A459_MK2206_30min_R1 4 GLGSSPDLELLLR 13 0 Q9NQQ7-2;Q9NQQ7;Q9NQQ7-3 Q9NQQ7-2 SLC35C2 Solute carrier family 35 member C2 1 GLGS(0.923)S(0.077)PDLELLLR;GLGS(0.5)S(0.5)PDLELLLR;GLGS(0.931)S(0.069)PDLELLLR;GLGS(0.944)S(0.056)PDLELLLR 194.86 0.00019757 55771400 1497.31 1691.11 1368.65 1216.69 2123.6 1728.35 2324 2145.73 1718 1627.25 TRUE FALSE 1369.955922 1581.018432 1275.749851 1310.399675 2039.012515 1826.207683 2168.9702 2126.970109 1896.592248 1828.846015 0.749082159 0.864489639 0.69757095 0.716517227 1.114917548 0.998557379 1.185977487 1.163012135 1.037043159 1 10.83671789 -6.263664409 24.99950745 1.092303516 0.760360028 0.832048022 0.071751473 77.16212106 866959.9553 0.022295037 0.026518543 5.45E-07 6.263664409 -0.331943488 GLGS(ph)SPDLELLLR ddPTM_A459_MK2206_30min_R2 2 GLGSSPDLELLLR 13 0 Q9NQQ7-2;Q9NQQ7;Q9NQQ7-3 Q9NQQ7-2 SLC35C2 Solute carrier family 35 member C2 1 GLGS(0.5)S(0.5)PDLELLLR;GLGS(0.925)S(0.075)PDLELLLR 166.6 0.0003278 797830 0 0 1143.12 1342.13 485.75 0 1795.36 551.24 1087.5 1668.2 TRUE FALSE 0 0 1181.23105 1232.473686 466.6770143 0 1559.627075 623.2889607 1182.088784 1613.766771 0 0 0.731971355 0.763724789 0.28918492 0 0.966451351 0.386232368 0.732502866 1 10.65621637 -7.993892705 0.177314151 1.21152973 9.70E-15 0.35587283 0.305684684 4.613818435 0.851451351 2.374233575 2.311052547 1.01E-08 7.993892705 -1.21152973 GLGTDEDS(ph)LIEIICSR ddPTM_A459_MK2206_30min_R1 8 GLGTDEDSLIEIICSR 16 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YMM1;H0YNA0;H0YN52;H0YLE2 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(0.998)LIEIICS(0.002)R 273.54 8.70E-51 105202500 20030.75 20282.78 21253.94 17556.05 22127.98 19681.13 21032.48 18939.77 17777.56 16404.42 TRUE FALSE 18327.02953 18962.36734 19811.28177 18908.22001 21246.5757 20795.45857 19629.44164 18774.18159 19625.60098 18436.7234 0.994050251 1.028510703 1.074555459 1.025573775 1.152405188 1.127936788 1.064692528 1.018303588 1.064484212 1 14.17029466 -2.922184133 16.02741747 1.059542157 0.526524795 0 0.050229073 0 0 0.012131566 0 0.001196233 2.922184133 -0.533017361 GLGTDEDS(ph)LIEIICSR ddPTM_A459_MK2206_30min_R2 6 GLGTDEDSLIEIICSR 16 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YMM1;H0YNA0;H0YN52;H0YLE2 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 GLGTDEDS(1)LIEIICSR;GLGT(0.074)DEDS(0.926)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGT(0.004)DEDS(0.996)LIEIICSR;GLGT(0.005)DEDS(0.992)LIEIICS(0.003)R;GLGTDEDS(1)LIEIICSR 213.02 2.44E-08 23080500 57295.8 65788.1 57691.6 72480.9 65490.8 60111.7 67018.8 58112.7 56220.6 61325.5 TRUE FALSE 61682.4105 62521.15862 59615.00915 66558.97862 62919.30213 62399.29287 58219.15106 65708.22942 61110.56616 59324.45396 1.039746789 1.053885109 1.004897731 1.121948441 1.060596397 1.051830884 0.981368511 1.107607825 1.03010752 1 15.8563393 -8.528158999 24.59198454 0.999999996 1.052433984 0.150177065 0.039263811 989.5902346 4608871.606 0.037070812 0.009571642 2.96E-09 8.528158999 0.052433987 GLGTDEDSLIEIICSR ddPTM_A459_MK2206_30min_R1 4 GLGTDEDSLIEIICSR 16 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YMM1;H0YNA0;H0YN52;H0YLE2 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;; 378.97 2.23E-245 113390000 7094.19 7516.23 6978.89 7143.6 8040.56 6808.09 6942.36 6449.72 5576.75 5619.79 FALSE TRUE 6490.791887 7026.922061 6505.182391 7693.80131 7720.287469 7193.558172 6479.247831 6393.330778 6156.473119 6316.012012 1.027672505 1.112556792 1.029950921 1.218142286 1.22233578 1.138939913 1.025844761 1.012241707 0.974740565 1 12.6247982 -7.360456261 3.841016104 0.998993458 1.128720748 0.486427179 0.061640218 0.232746222 6.230649444 0.030282703 0.019739895 4.36E-08 7.360456261 0.12972729 GLGTDEDSLIEIICSR ddPTM_A459_MK2206_30min_R2 4 GLGTDEDSLIEIICSR 16 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YMM1;H0YNA0;H0YN52;H0YLE2 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;; 327.06 9.70E-118 40933500 35010.6 40981.9 35148.2 41012.1 38717.2 40426.5 40758.6 32789.2 40782.5 39913.7 FALSE TRUE 37691.03845 38946.79844 36320.02345 37661.28024 37196.96819 41964.95879 35406.94686 37074.86102 44329.68813 38611.31924 0.976165518 1.008688623 0.940657407 0.975394806 0.963369523 1.086856383 0.917009508 0.960207052 1.148100842 1 15.23673623 -8.238247047 24.82791273 1.074050451 0.979234086 0.331563388 0.054235589 689.2072607 737814.3643 0.03511273 0.013252066 5.78E-09 8.238247047 -0.094816365 GLGTDEDTLIEILAS(ph)R ddPTM_A459_MK2206_30min_R1 3 GLGTDEDTLIEILASR 16 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 1 GLGTDEDTLIEILAS(1)R;GLGTDEDTLIEILAS(1)R;GLGTDEDTLIEILAS(1)R 194.01 1.19E-06 12236000 1375.11 1632.45 1497.17 1267.63 1299.92 1649.21 1201.79 1079.05 1400.91 1184.16 TRUE FALSE 1258.149674 1526.177208 1395.546272 1365.263082 1248.141434 1742.586845 1121.620782 1069.61598 1546.539608 1330.862681 0.945364005 1.146757836 1.048602754 1.025848198 0.93784389 1.309366376 0.842777244 0.803701235 1.162057987 1 10.37814601 GLGTDEDTLIEILAS(ph)R ddPTM_A459_MK2206_30min_R2 2 GLGTDEDTLIEILASR 16 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 1 GLGTDEDTLIEILAS(1)R;GLGTDEDTLIEILAS(1)R 113.11 0.0023303 9451500 16910.3 22268.6 20666.9 24710.5 21622.9 26393.2 25792.1 15258.4 22490.9 21610.2 TRUE FALSE 18204.96557 21162.77371 21355.92413 22691.57311 20773.8763 27397.61172 22405.56629 17252.72527 24447.11783 20905.06094 0.87084011 1.012327769 1.021567179 1.085458357 0.993724742 1.310573157 1.071777133 0.825289403 1.169435377 1 14.35156463 -4.205874674 1.158476921 1.06440492 0.420575877 0.190698371 0.118137262 9.148574943 4.070790847 0.036438977 9.878044909 6.22E-05 4.205874674 -0.643829043 GLGTDEDTLIEILASR ddPTM_A459_MK2206_30min_R1 4 GLGTDEDTLIEILASR 16 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 ;;; 336.8 1.71E-134 340328600 1114.919 1520.25 1569.696 1271.97 1219.36 1124.07 1357.09 1066.18 1066.36 1313.03 FALSE TRUE 1020.089284 1421.281449 1463.149409 1369.93735 1170.790309 1187.713872 1266.561002 1056.858501 1177.211938 1475.698069 0.691258805 0.963124828 0.991496458 0.928331736 0.793380661 0.804848835 0.85827923 0.716175295 0.797732248 1 10.52718186 -6.262076621 24.96010357 0.814527607 0.905518342 0.075253971 0.101955231 109.6683286 4295593.358 0.030507542 0.036697408 5.47E-07 6.262076621 0.090990734 GLGTDEDTLIEILASR ddPTM_A459_MK2206_30min_R2 2 GLGTDEDTLIEILASR 16 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 ; 308.58 9.80E-101 52925000 61812 68059 53551 67265 64457 70226 74485 54940 55600 60670 FALSE TRUE 66544.37425 64679.28903 55336.36361 61769.23433 61926.09431 72898.49964 64705.03003 62120.84664 60435.9875 58690.34287 1.133821528 1.102043128 0.942852962 1.052459933 1.055132604 1.242086791 1.102481718 1.058450907 1.029743303 1 15.84083552 -8.252848837 2.326471975 1.005085291 1.087320668 0.153434327 0.070722278 0.653664959 6.437031112 0.071363837 0.020692601 5.59E-09 8.252848837 0.082235378 GLHQSIEEFR ddPTM_A459_MK2206_30min_R1 1 GLHQSIEEFR 10 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 94.409 0.033531 3086300 3849.4 2057.6 2342.8 2068.8 5404.5 5159.4 5148.2 3103.3 2098 1754.5 FALSE TRUE 3521.988316 1923.649866 2183.777263 2228.139334 5189.227321 5451.520769 4804.772971 3076.168175 2316.094608 1971.860706 1.786124297 0.975550585 1.107470349 1.129967917 2.631639905 2.764658149 2.436669567 1.560033204 1.174573133 1 10.94534193 -6.234359769 24.6141203 2.023204187 1.220025594 0.231391697 0.589369631 840.1562092 763663.0406 0.184441168 0.238043661 5.83E-07 6.234359769 -0.803178593 GLHSENREDEGWQVYR ddPTM_A459_MK2206_30min_R1 2 GLHSENREDEGWQVYR 16 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 0 ; 99.161 0.0053348 15356200 7296.4 7087.7 7563 6988.2 8746.3 7567.6 8370.1 8300.5 5291.2 3925.1 FALSE TRUE 6675.802865 6626.289442 7049.644632 7526.432375 8397.91635 7996.070972 7811.745901 8227.929604 5841.239175 4411.371021 1.513317024 1.50209298 1.598062053 1.706143586 1.903697583 1.812604502 1.770820424 1.865163815 1.324132372 1 12.10701139 -8.498531579 3.967172822 1.002042322 1.70850754 0.753763843 0.131418787 0.09926178 3.9713111 0.144855259 0.038000084 3.17E-09 8.498531579 0.706465219 GLHSENREDEGWQVYR ddPTM_A459_MK2206_30min_R2 1 GLHSENREDEGWQVYR 16 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 0 64.104 0.047174 2977900 10174 12090 12908 16877 12616 13835 9872.1 10258 15541 12981 FALSE TRUE 10952.92926 11489.62818 13338.34628 15498.09511 12120.63245 14361.50062 8575.881411 11598.75582 16892.72809 12557.43103 0.87222691 0.914966457 1.0621875 1.234177203 0.965215928 1.143665498 0.68293279 0.923656741 1.345237576 1 13.61625373 -5.155181652 4.538036377 1.036208009 0.88339247 0.111390732 0.170613841 0.545462113 18.05405877 0.045119787 0.131484918 7.00E-06 5.155181652 -0.152815539 GLHVVEVTYDDVPIPNS(ph)PFK ddPTM_A459_MK2206_30min_R2 1 GLHVVEVTYDDVPIPNSPFK 20 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 1 GLHVVEVTYDDVPIPNS(1)PFK 90.978 0.0010661 3925800 17462 17660 17581 16078 17722 15538 23422 16223 12551 17464 TRUE FALSE 18798.90415 16783.03008 18167.14177 14764.37597 17026.14523 16129.30948 20346.66327 18343.4018 13642.66329 16894.15111 1.1127463 0.993422515 1.075350969 0.873934172 1.007813007 0.95472743 1.204361387 1.085784168 0.807537662 1 14.04423624 -3.844983457 1.844586087 1.005594929 3.030016328 0.088307296 0.105144563 79.07351821 16.85012549 0.02869811 595.1001348 0.000142895 3.844983457 2.024421399 GLIVYCVT(ph)SPK ddPTM_A459_MK2206_30min_R2 1 GLIVYCVTSPK 11 0 E9PCH4;Q8TEU7;A0A5F9ZHG7;Q8TEU7-4 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 GLIVYCVT(0.5)S(0.5)PK 168.85 0.0010653 18546000 200710 222960 215510 173240 220830 154850 233450 151880 173700 234520 TRUE FALSE 216076.5119 211888.1306 222694.9958 159085.7378 212159.1046 160742.9253 202797.7346 171731.2375 188808.112 226867.6316 0.952434291 0.933972507 0.98160762 0.701227128 0.935166921 0.708531773 0.893903344 0.756966678 0.832239093 1 17.79149126 -5.728940404 24.99964726 0.824111303 0.953801675 0.276546619 0.090743052 223.7585699 172123.4046 0.022349104 0.038706048 1.87E-06 5.728940404 0.129690371 GLIVYCVTS(ph)PK ddPTM_A459_MK2206_30min_R1 2 GLIVYCVTSPK 11 0 E9PCH4;Q8TEU7;A0A5F9ZHG7;Q8TEU7-4 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 GLIVYCVT(0.268)S(0.732)PK;GLIVYCVT(0.056)S(0.944)PK 199.03 1.95E-05 66590000 15464.9 16277.8 17106.1 16835.4 10582.2 8708.5 11642.3 12858.5 12727.3 11070.7 TRUE FALSE 14149.52905 15218.11226 15944.98559 18132.06543 10160.68857 9201.567744 10865.66341 12746.07949 14050.34838 12442.2219 1.137218832 1.223102464 1.281522362 1.457301242 0.816629751 0.739543775 0.873289634 1.02442149 1.129247533 1 13.60295652 -6.269786413 24.99644525 0.919332566 1.271575683 0.63705602 0.127122552 430.1479065 1288140.185 0.043222022 0.049806076 5.37E-07 6.269786413 0.352243117 GLIVYCVTS(ph)PK ddPTM_A459_MK2206_30min_R2 1 GLIVYCVTSPK 11 0 E9PCH4;Q8TEU7;A0A5F9ZHG7;Q8TEU7-4 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 GLIVYCVT(0.165)S(0.835)PK 170.89 0.00033734 18737000 178470 191010 186170 165640 200050 145160 219820 144400 158790 183410 TRUE FALSE 192133.8004 181524.7212 192376.8149 152106.6821 192195.0318 150684.1655 190957.3699 163273.5758 172601.2672 177425.3467 1.082899394 1.023104785 1.084269065 0.857299619 1.083244505 0.849282069 1.076268828 0.920238167 0.972810652 1 17.4368526 -5.707028549 24.99999321 0.966934871 1.059392659 0.259631245 0.075591436 124.5158893 57209.71976 0.018682884 0.032359678 1.96E-06 5.707028549 0.092457787 GLLAQGLRPES(ph)PPPAGPLLNGAPAGES(ph)PQPK ddPTM_A459_MK2206_30min_R1 1 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK 31 1 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 2 GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK 85.175 2.72E-06 51135000 2627.1 2926.8 2847.3 2345 2473.4 1866.2 2483.4 2297.3 2126.3 2123.7 TRUE FALSE 2403.65135 2736.264788 2654.033209 2525.612306 2374.87924 1971.862631 2317.736917 2277.214948 2347.336494 2386.799989 1.007060231 1.146415619 1.111962972 1.058158337 0.995005552 0.826153276 0.971064575 0.954087045 0.98346594 1 11.22086196 -6.295331113 3.045504678 0.943489923 1.091365826 0.557238174 0.055904535 0.18282644 3.426767264 0.018054424 0.021968718 5.07E-07 6.295331113 0.147875903 GLLAQGLRPES(ph)PPPAGPLLNGAPAGES(ph)PQPK ddPTM_A459_MK2206_30min_R2 2 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK 31 1 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 2 GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK 80.542 2.77E-05 15830400 46032 48580 49219 49927 50381 38854 48366 42922 39133 47035 TRUE FALSE 49556.24531 46167.58784 50859.93689 45847.80439 48402.7888 40332.6162 42015.4861 48532.05277 42536.7176 45500.2518 1.089142221 1.014666645 1.117794625 1.007638476 1.063791669 0.88642622 0.923412167 1.06663262 0.934867741 1 15.47358691 -6.726751206 24.9561391 0.964003772 1.056622329 0.441113001 0.054179309 179.177001 128907.0386 0.017865583 0.017864784 1.88E-07 6.726751206 0.092618557 GLLAQGLRPES(ph)PPPAGPLLNGAPAGESPQPK ddPTM_A459_MK2206_30min_R2 2 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK 31 1 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 GLLAQGLRPES(0.999)PPPAGPLLNGAPAGES(0.001)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK 71.338 8.08E-05 1086020000 165544 200803 196366 221796 179651 163169 233854 152869 175992 179756 TRUE FALSE 178218.1759 190831.415 202912.7444 203674.5573 172596.9991 169378.5106 203148.6889 172849.5032 191299.466 173890.5764 1.024886912 1.097422407 1.166899027 1.171280017 0.992560969 0.97405227 1.168255883 0.994013055 1.100114048 1 17.40782023 -6.263773684 24.97324171 1.041165495 1.117556179 0.240153356 0.066877027 316.5640212 3386725.784 0.020803346 0.024783905 5.45E-07 6.263773684 0.076390684 GLLAQGLRPESPPPAGPLLNGAPAGES(ph)PQPK ddPTM_A459_MK2206_30min_R1 2 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK 31 1 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 GLLAQGLRPES(0.46)PPPAGPLLNGAPAGES(0.54)PQPK;GLLAQGLRPESPPPAGPLLNGAPAGES(1)PQPK 135.37 1.93E-18 1007460000 4531.4 4030.1 3863.2 3766.7 4047.8 4218 4382.1 3851 3518.2 2922.8 TRUE FALSE 4145.980635 3767.739757 3600.976747 4056.811887 3886.567555 4456.819515 4089.778105 3817.331113 3883.92948 3284.89853 1.262133547 1.146988171 1.096221608 1.234988493 1.183162134 1.356760178 1.245024182 1.162084941 1.182359042 1 11.68163309 -8.943306939 1.382429283 1.000294859 1.211844976 0.466942086 0.067550178 1.714114367 4.534322157 0.069689244 0.020499922 1.14E-09 8.943306939 0.211550118 GLLASDLNT(ph)DGDMRVTPEPGAGPTQGLLR ddPTM_A459_MK2206_30min_R2 1 GLLASDLNTDGDMRVTPEPGAGPTQGLLR 29 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 GLLAS(0.074)DLNT(0.586)DGDMRVT(0.327)PEPGAGPT(0.012)QGLLR 52.272 0.021427 5030700 1433.3 3559.3 2590.4 3183.9 2370.9 3547.5 5977.4 1135.6 3911.9 3729.5 TRUE FALSE 1543.03455 3382.550338 2676.762643 2923.765185 2277.806553 3682.502598 5192.5602 1284.026819 4252.149991 3607.80672 0.427693241 0.937564177 0.741936265 0.810399617 0.631354928 1.020703958 1.439256757 0.35590233 1.178596948 1 11.81690634 -6.770294504 24.98520352 0.986158734 0.729819149 0.206578847 0.281373726 356.4602181 1005765.248 0.096356805 0.086237165 1.70E-07 6.770294504 -0.256339585 GLLASDLNTDGDMRVT(ph)PEPGAGPTQGLLR ddPTM_A459_MK2206_30min_R1 2 GLLASDLNTDGDMRVTPEPGAGPTQGLLR 29 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 GLLAS(0.005)DLNT(0.289)DGDMRVT(0.697)PEPGAGPT(0.009)QGLLR;GLLAS(0.036)DLNT(0.308)DGDMRVT(0.65)PEPGAGPT(0.007)QGLLR 59.687 0.0054133 40450000 2046.84 2308.33 2263.68 1989.96 2398.83 2162.27 2778.39 2282.82 1878.02 1879.94 TRUE FALSE 1872.74551 2158.057297 2110.027709 2143.227064 2303.279521 2284.695859 2593.048673 2262.861545 2073.2469 2112.84116 0.886363606 1.021400633 0.998668404 1.014381537 1.090133781 1.081338201 1.227280461 1.0710041 0.981260181 1 11.0449686 -3.857291487 0.639970499 1.082475891 0.418975378 0.384704822 0.066347695 10.19050618 1.307350778 0.030623626 6.480029299 0.000138902 3.857291487 -0.663500512 GLLASDLNTDGDMRVT(ph)PEPGAGPTQGLLR ddPTM_A459_MK2206_30min_R2 1 GLLASDLNTDGDMRVTPEPGAGPTQGLLR 29 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 GLLASDLNT(0.022)DGDMRVT(0.97)PEPGAGPT(0.007)QGLLR 69.649 0.00051087 5789200 19644 23565 16048 20240 23918 25874 22759 18926 20128 19351 TRUE FALSE 21147.95974 22394.79637 16583.03231 18586.32726 22978.85914 26858.6532 19770.71596 21399.69318 21878.69706 18719.57845 1.129724144 1.196330164 0.885865691 0.99288172 1.227530801 1.434789425 1.056151772 1.143171746 1.168760136 1 14.19226033 GLLEFEHQR ddPTM_A459_MK2206_30min_R2 4 GLLEFEHQR 9 0 F5H6X6;Q14697;Q14697-2;E9PKU7;E9PNH1 F5H6X6 GANAB Neutral alpha-glucosidase AB 0 ;;; 191.17 0.0024513 16543600 150102 174450 170534 198846 184657 200287 174814 143087 160172 183654 FALSE TRUE 161593.9245 165787.0667 176219.5184 182599.6457 177406.4384 207909.0621 151860.7118 161788.9622 174103.471 177661.385 0.909561324 0.933163201 0.991884187 1.027795915 0.998564985 1.170254651 0.854776134 0.910659129 0.979973622 1 17.43877062 -5.166555545 3.496412416 0.991708484 0.914343226 0.121608829 0.076690594 0.568130288 12.83043207 0.021266469 0.06804792 6.81E-06 5.166555545 -0.077365257 GLLPGGTQVLDGTS(ph)GFSPAPK ddPTM_A459_MK2206_30min_R2 1 GLLPGGTQVLDGTSGFSPAPK 21 0 Q96S94;Q96S94-3 Q96S94 CCNL2 Cyclin-L2 1 GLLPGGTQVLDGT(0.058)S(0.545)GFS(0.397)PAPK 131.9 4.82E-05 31488000 115120 137530 117030 113700 142750 122500 141580 111290 92134 126980 TRUE FALSE 123933.6757 130700.4602 120931.7218 104410.3463 137144.9177 127161.8233 122990.3759 125835.9851 100147.6488 122836.653 1.008930744 1.06401841 0.98449216 0.849993416 1.116482047 1.035210747 1.001251442 1.024417241 0.815291253 1 16.90638158 -8.226512488 24.88614413 0.907645518 1.010194572 0.224770696 0.076477052 737.3762616 525397.5433 0.051108336 0.019315223 5.94E-09 8.226512488 0.102549054 GLLPGGTQVLDGTSGFS(ph)PAPK ddPTM_A459_MK2206_30min_R1 2 GLLPGGTQVLDGTSGFSPAPK 21 0 Q96S94;Q96S94-3 Q96S94 CCNL2 Cyclin-L2 1 GLLPGGTQVLDGTSGFS(1)PAPK;GLLPGGTQVLDGT(0.092)S(0.158)GFS(0.75)PAPK 244.73 1.16E-31 53119000 14601.8 13677.8 14542 13061.7 12698.5 10921.8 13079.5 13500.3 13513.8 11755.9 TRUE FALSE 13359.84023 12787.37273 13554.92956 14067.7144 12192.69186 11540.18288 12206.99042 13382.2683 14918.60787 13212.30964 1.011166147 0.967837803 1.025931871 1.064743014 0.922828195 0.873441752 0.92391041 1.01286366 1.129144583 1 13.68959507 -8.004138778 24.04723936 1.066716254 0.9700405 0.285850498 0.059854191 131.369575 763279.2935 0.036943581 0.017046827 9.91E-09 8.004138778 -0.096675754 GLLPGGTQVLDGTSGFS(ph)PAPK ddPTM_A459_MK2206_30min_R2 2 GLLPGGTQVLDGTSGFSPAPK 21 0 Q96S94;Q96S94-3 Q96S94 CCNL2 Cyclin-L2 1 GLLPGGTQVLDGT(0.01)S(0.081)GFS(0.909)PAPK;GLLPGGTQVLDGT(0.086)S(0.042)GFS(0.872)PAPK 130.01 5.42E-05 32196600 176268 182719 207440 205514 192329 171398 218206 179131 180525 214425 TRUE FALSE 189763.2136 173645.4402 214355.9461 188722.8488 184777.1971 177920.671 189555.2901 202544.0367 196226.7382 207428.3298 0.914837495 0.83713464 1.033397638 0.909821956 0.890800197 0.857745281 0.913835108 0.976453105 0.945997774 1 17.66225342 -7.732291712 6.530423192 0.971057628 0.907517455 0.265958214 0.050136844 0.252045868 34.33462209 0.025275163 0.013949292 1.85E-08 7.732291712 -0.063540173 GLLPGLLPAPADKLT(ph)PK ddPTM_A459_MK2206_30min_R1 2 GLLPGLLPAPADKLTPK 17 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 GLLPGLLPAPADKLT(1)PK;GLLPGLLPAPADKLT(1)PK 114.53 0.0023584 18395700 10095.6 11708 11361.3 9986 7113.4 6202.7 7390 8750 9245.4 9623.4 TRUE FALSE 9236.916206 10945.80707 10590.12661 10755.12345 6830.058215 6553.891514 6897.026584 8673.499673 10206.49241 10815.61944 0.854034875 1.012037001 0.979151186 0.994406608 0.631499495 0.605965432 0.637691315 0.801942017 0.9436808 1 13.40082867 -6.247172313 24.69482048 0.745396796 0.965005532 0.331175296 0.129205982 732.8229858 1268439.982 0.039508725 0.050749897 5.66E-07 6.247172313 0.219608736 GLLPGLLPAPADKLT(ph)PK ddPTM_A459_MK2206_30min_R2 1 GLLPGLLPAPADKLTPK 17 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 GLLPGLLPAPADKLT(1)PK 112.02 0.002721 18273000 100410 82911 78636 67484 80177 46464 107540 73367 57647 97036 TRUE FALSE 108097.4668 78793.7603 81257.68499 61970.34133 77028.84812 48232.22008 93419.86882 82956.31881 62661.03186 93869.72327 1.151569037 0.839394829 0.865643172 0.6601739 0.82059311 0.51382084 0.995207673 0.883738824 0.667531869 1 16.51837229 -3.163203081 10.36006298 0.82698867 0.944458054 0 0.178835193 0 0 0.040165404 0 0.000686747 3.163203081 0.117469384 GLLS(ph)DSMTDVPVDTGVAAR ddPTM_A459_MK2206_30min_R2 2 GLLSDSMTDVPVDTGVAAR 19 0 O43399;O43399-5;O43399-7;A0A087WYR3;A0A087WZ51;O43399-2;O43399-4;O43399-3 O43399;O43399-2 TPD52L2 Tumor protein D54 1 GLLS(0.494)DS(0.444)MT(0.062)DVPVDTGVAAR;GLLS(0.967)DS(0.033)MTDVPVDTGVAAR 178.99 2.96E-10 2878300 6524 11735.9 13202.7 15504.9 15099.1 15455.4 12381.4 10627.6 10551.4 9947.1 TRUE FALSE 7023.482456 11153.11227 13642.87143 14238.10007 14506.23347 16043.56608 10755.70731 12016.66381 11469.1417 9622.526942 0.729900004 1.159062722 1.41780548 1.479663311 1.507528486 1.667292404 1.117763283 1.248805421 1.191905387 1 13.23220009 -8.47222162 1.183934805 1.009016356 1.323734876 0.1153967 0.245883494 1.091909255 3.348195652 0.251086463 0.079298253 3.37E-09 8.47222162 0.31471852 GLLS(ph)PPMGQSGLR ddPTM_A459_MK2206_30min_R1 1 GLLSPPMGQSGLR 13 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 GLLS(1)PPMGQSGLR 120.9 0.0029462 107770000 4094.5 3821.9 4534 3663.5 4891.9 4296.5 4471.2 3800.7 3368.6 3415.9 TRUE FALSE 3746.241274 3573.093615 4226.244712 3945.663405 4697.045264 4539.764117 4172.934406 3767.470881 3718.778025 3839.087481 0.975815553 0.930714299 1.10084616 1.027760744 1.223479613 1.182511245 1.086959968 0.981345411 0.968661965 1 11.90654772 -5.261680601 24.9979105 1.079169727 0.95326492 0.25544144 0.079840293 28.59285894 2963531.461 0.022805227 0.052731795 5.47E-06 5.261680601 -0.125904807 GLLS(ph)PPMGQSGLR ddPTM_A459_MK2206_30min_R2 4 GLLSPPMGQSGLR 13 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 GLLS(0.999)PPMGQS(0.001)GLR;GLLS(1)PPMGQSGLR;GLLS(0.989)PPMGQS(0.011)GLR;GLLS(1)PPMGQSGLR 113.07 0.0067312 140588000 237050 293680 266067 322492 340305 303848 310976 250978 279755 297922 TRUE FALSE 255198.7303 279096.2783 274937.541 296143.372 326942.9158 315411.1486 270144.4777 283781.6863 304087.5842 288200.8295 0.885489229 0.968409004 0.953979006 1.027559055 1.134427393 1.094414437 0.937348022 0.984666445 1.055123903 1 18.13671496 -5.693395137 3.296912131 1.035994715 0.933440098 0.398897872 0.055368294 0.278616041 6.061243888 0.017411802 0.031586171 2.03E-06 5.693395137 -0.102554618 GLLS(ph)QGSPLSWEETKR ddPTM_A459_MK2206_30min_R2 1 GLLSQGSPLSWEETKR 16 1 E1CEI4;P48506;D6RGF8;A0A0C4DGB2 E1CEI4 GCLC Glutamate--cysteine ligase catalytic subunit 1 GLLS(0.91)QGS(0.089)PLSWEETKR 65.265 0.028839 2657400 13744 11274 11002 12252 12306 11679 11341 8749.4 9802.5 11677 TRUE FALSE 14796.25121 10714.14955 11368.80119 11250.97241 11822.80461 12123.45253 9851.913077 9892.976621 10655.10373 11295.98045 1.309868699 0.948492219 1.006446607 0.99601557 1.046638197 1.073253675 0.872160954 0.875796189 0.943265065 1 13.46352188 -7.256678565 24.82565977 0.912455232 1.051806253 0.328499803 0.097215053 441.3184452 2301299.294 0.037212822 0.027860817 5.54E-08 7.256678565 0.139351021 GLLSDS(ph)MTDVPVDTGVAAR ddPTM_A459_MK2206_30min_R1 4 GLLSDSMTDVPVDTGVAAR 19 0 O43399;O43399-5;O43399-7;A0A087WYR3;A0A087WZ51;O43399-2;O43399-4;O43399-3 O43399;O43399-2 TPD52L2 Tumor protein D54 1 GLLS(0.001)DS(0.982)MT(0.017)DVPVDTGVAAR;GLLS(0.015)DS(0.942)MT(0.043)DVPVDTGVAAR;GLLS(0.015)DS(0.978)MT(0.008)DVPVDTGVAAR;GLLS(0.016)DS(0.932)MT(0.052)DVPVDTGVAAR 195.6 2.82E-15 30243600 5094.4 6592 7897 6142.1 7278.8 5763.5 6525.4 6123.3 5236.65 5550.6 TRUE FALSE 4661.094528 6162.859602 7360.973642 6615.165606 6988.869983 6089.824389 6090.102472 6069.764634 5781.018507 6238.250233 0.747179795 0.987914779 1.17997409 1.060420047 1.120325367 0.976207135 0.976251712 0.972991529 0.926705132 1 12.60692571 -6.966886672 24.95313617 0.968092399 1.030614199 0.043768163 0.107807578 577.8403054 435440.0962 0.040154055 0.035412375 1.08E-07 6.966886672 0.0625218 GLLSDS(ph)MTDVPVDTGVAAR ddPTM_A459_MK2206_30min_R2 8 GLLSDSMTDVPVDTGVAAR 19 0 O43399;O43399-5;O43399-7;A0A087WYR3;A0A087WZ51;O43399-2;O43399-4;O43399-3 O43399;O43399-2 TPD52L2 Tumor protein D54 1 GLLS(0.009)DS(0.961)MT(0.031)DVPVDTGVAAR;GLLS(0.002)DS(0.499)MT(0.499)DVPVDTGVAAR;GLLSDS(1)MTDVPVDTGVAAR;GLLS(0.002)DS(0.995)MT(0.002)DVPVDTGVAAR;GLLS(0.165)DS(0.815)MT(0.02)DVPVDTGVAAR;GLLS(0.028)DS(0.968)MT(0.003)DVPVDTGVAAR;GLLS(0.097)DS(0.461)MT(0.441)DVPVDT(0.001)GVAAR;GLLS(0.373)DS(0.613)MT(0.014)DVPVDTGVAAR 210.91 1.35E-16 26626900 83478.7 105142.1 109874.5 125629.9 121947.8 113943.8 109254.4 84214.7 95996.4 105443.8 TRUE FALSE 89869.89346 99920.8962 113537.661 115365.5353 117159.5166 118280.0112 94909.16604 95221.85044 104345.9934 102003.1774 0.881049941 0.979586114 1.113079649 1.130999428 1.148586932 1.15957183 0.930453035 0.933518473 1.022968068 1 16.63825457 -9.939294604 7.321670667 0.999999928 1.038095173 0.008539563 0.095946516 0 0 0.103327461 0.02506059 1.15E-10 9.939294604 0.038095245 GLLSDSMT(ph)DVPVDTGVAAR ddPTM_A459_MK2206_30min_R1 3 GLLSDSMTDVPVDTGVAAR 19 0 O43399;O43399-5;O43399-7;A0A087WYR3;A0A087WZ51;O43399-2;O43399-4;O43399-3 O43399;O43399-2 TPD52L2 Tumor protein D54 1 GLLS(0.001)DS(0.156)MT(0.843)DVPVDTGVAAR;GLLSDS(0.111)MT(0.889)DVPVDTGVAAR;GLLSDS(0.07)MT(0.93)DVPVDTGVAAR 298.1 9.48E-100 70932000 7279.7 9935 12186.6 9290.3 11769.1 8201.3 10209.4 8938.8 8046.7 8380.3 TRUE FALSE 6660.523288 9288.229694 11359.40755 10005.84052 11300.31183 8665.650519 9528.349554 8860.649014 8883.18326 9418.514832 0.707173414 0.986167125 1.206072056 1.06235863 1.199797636 0.920065496 1.011661576 0.940769237 0.943161785 1 13.20128387 GLLSGQTSPT(ph)NAK ddPTM_A459_MK2206_30min_R2 2 GLLSGQTSPTNAK 13 0 G3V1P3;Q969J3 G3V1P3 LOH12CR1 Loss of heterozygosity 12 chromosomal region 1 protein 1 GLLS(0.001)GQT(0.097)S(0.097)PT(0.805)NAK;GLLSGQT(0.077)S(0.337)PT(0.586)NAK 175.66 0.00023168 18561300 94897 111866 103565 107240 99708 88608 116495 75525 90266 97141 TRUE FALSE 102162.3873 106310.8971 107017.8054 98478.14896 95792.96293 91980.03953 101199.0666 85396.37682 98117.17352 93971.29713 1.087165873 1.131312436 1.138835035 1.047959877 1.019385343 0.978809938 1.07691465 0.90874958 1.04411854 1 16.51993254 -5.991138511 2.650326862 1.002311201 1.120383497 0.579473979 0.043336334 0.185633821 2.635043797 0.012732747 0.019297643 1.02E-06 5.991138511 0.118072296 GLLSNHTGS(ph)PR ddPTM_A459_MK2206_30min_R1 2 GLLSNHTGSPR 11 0 Q13111 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 GLLSNHT(0.002)GS(0.998)PR;GLLSNHT(0.094)GS(0.906)PR 90.229 0.018602 9855500 4492.6 2366 2806.2 1881.11 4857.9 5016.5 5002.6 3135.9 2604.7 2483.1 TRUE FALSE 4110.480778 2211.97297 2615.722963 2025.993418 4664.399556 5300.529895 4668.885682 3108.483157 2875.467886 2790.725174 1.472907765 0.792615837 0.937291492 0.725973821 1.671393371 1.899337829 1.673000883 1.113862155 1.030365839 1 11.44642434 -6.262210395 24.9999822 1.442504055 0.965448148 0.261778725 0.336662532 92.84196542 3010377.77 0.108933922 0.130949279 5.47E-07 6.262210395 -0.477055907 GLLSNHTGS(ph)PR ddPTM_A459_MK2206_30min_R2 4 GLLSNHTGSPR 11 0 Q13111 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 GLLSNHT(0.058)GS(0.942)PR;GLLSNHT(0.078)GS(0.922)PR;GLLSNHT(0.235)GS(0.765)PR;GLLSNHT(0.091)GS(0.909)PR 108.97 0.0063931 32707700 53413.2 126666 87763.3 175106 174948 220000 172645 117850 147557 103795 TRUE FALSE 57502.55566 120375.9506 90689.28462 160799.2797 168078.6625 228372.2542 149976.5041 133253.3996 160391.2411 100408.1777 0.572687972 1.198866003 0.903206161 1.601456011 1.673953919 2.274438791 1.493668221 1.327117001 1.597392213 1 16.61551725 -5.763018483 23.18897606 1.611385878 0.922314323 0.458457785 0.333375441 14.58461035 214191.9585 0.093761643 0.147980533 1.73E-06 5.763018483 -0.689071555 GLLSQGS(ph)PLSWEETKR ddPTM_A459_MK2206_30min_R1 2 GLLSQGSPLSWEETKR 16 1 E1CEI4;P48506;D6RGF8;A0A0C4DGB2 E1CEI4 GCLC Glutamate--cysteine ligase catalytic subunit 1 GLLS(0.226)QGS(0.774)PLSWEETKR;GLLS(0.001)QGS(0.997)PLS(0.002)WEETKR 148.19 0.00015168 65519000 4734.8 4869.9 5266 4596.1 4767.3 3954.5 4351.4 4578.9 3925.4 3818.9 TRUE FALSE 4332.080397 4552.868625 4908.558592 4950.092418 4577.408346 4178.400373 4061.126046 4538.86716 4333.459377 4292.014163 1.009335066 1.060776701 1.143649206 1.153326208 1.066494231 0.973529027 0.946205183 1.057514488 1.009656355 1 12.06743912 -6.616642439 5.190433259 0.998324157 1.095133257 0.488059369 0.046182382 0.194699029 8.531877475 0.01690091 0.016889331 2.42E-07 6.616642439 0.0968091 GLLSQGS(ph)PLSWEETKR ddPTM_A459_MK2206_30min_R2 2 GLLSQGSPLSWEETKR 16 1 E1CEI4;P48506;D6RGF8;A0A0C4DGB2 E1CEI4 GCLC Glutamate--cysteine ligase catalytic subunit 1 GLLS(0.003)QGS(0.962)PLS(0.013)WEET(0.022)KR;GLLS(0.007)QGS(0.969)PLS(0.025)WEETKR 103.31 0.0022965 43406000 114437 133965 117660 152590 130085 132101 147755 103012 117019 131914 TRUE FALSE 123198.3847 127312.4929 121582.7257 140122.9089 124977.2093 137128.1961 128354.591 116476.0221 127197.1011 127609.657 0.965431517 0.997671304 0.95277057 1.098058816 0.979371093 1.074591057 1.005837599 0.912752411 0.996767048 1 16.96137799 -9.963545049 5.567976786 0.999998614 0.999141386 0 0.051643466 69732471.54 15.09161281 0.072651368 0.01264698 1.09E-10 9.963545049 -0.000857228 GLLTDS(ph)PAATVLAEAR ddPTM_A459_MK2206_30min_R1 2 GLLTDSPAATVLAEAR 16 0 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 GLLT(0.13)DS(0.858)PAAT(0.012)VLAEAR;GLLT(0.121)DS(0.866)PAAT(0.012)VLAEAR 123.63 0.0013516 5040000 2663.2 2749.3 2337.5 1901.35 2969.6 2531.3 2436 2141.7 1960.33 2044.22 TRUE FALSE 2436.680855 2570.32007 2178.837013 2047.792306 2851.314544 2674.620018 2273.498885 2122.975343 2164.113319 2297.473407 1.060591538 1.118759444 0.948362234 0.891323617 1.241065309 1.164157117 0.989564832 0.924047842 0.941953588 1 11.16583245 -7.508952813 22.16972858 0.951161611 1.067750454 0.237165488 0.095168566 233.5063885 371743.6026 0.045179151 0.028981458 3.10E-08 7.508952813 0.116588843 GLLYDS(ph)DEEDEERPAR ddPTM_A459_MK2206_30min_R1 13 GLLYDSDEEDEERPAR 16 1 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR 281.54 5.51E-62 1156021600 34273.9 33544.15 32947.81 28231.26 35227.31 31295.8 34833.45 30026.27 29445.36 29538.72 TRUE FALSE 31358.72483 31360.41974 30711.40446 30405.63654 33824.13165 33067.74115 32509.77411 29763.75349 32506.31054 33198.19964 0.944591127 0.944642182 0.925092469 0.915882092 1.018854396 0.996070314 0.979263167 0.896547217 0.979158837 1 15.01881738 -6.232983059 24.98241757 0.974078136 0.932882732 0.333040266 0.031383654 1039.630897 912714.1708 0.010023755 0.012938418 5.85E-07 6.232983059 -0.041195404 GLLYDS(ph)DEEDEERPAR ddPTM_A459_MK2206_30min_R2 11 GLLYDSDEEDEERPAR 16 1 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLY(0.004)DS(0.996)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR 249.36 1.13E-28 3961120200 692854.4 822812.3 778387.5 902838.4 834797.5 770495.8 845600.5 653198.8 708507.5 768413.5 TRUE FALSE 745899.8656 781952.6377 804338.5508 829073.6147 802019.1556 799817.5576 734572.1386 738574.1259 770132.2017 743340.2304 1.003443423 1.051944461 1.082059759 1.115335321 1.078939526 1.075977762 0.98820447 0.99358826 1.036042676 1 19.50366316 -7.256008816 24.83954068 1.003924539 1.070517267 0.531636627 0.029133186 339.550484 1553116.952 0.012281693 0.009237619 5.55E-08 7.256008816 0.066592728 GLLYDS(ph)DEEDEERPARK ddPTM_A459_MK2206_30min_R1 1 GLLYDSDEEDEERPARK 17 2 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 GLLY(0.001)DS(0.999)DEEDEERPARK 54.103 0.032663 10588000 1963.8 2068.2 1915 1989.1 2354.1 2373.1 1921.9 2400.4 1866.2 1352.3 TRUE FALSE 1796.768498 1933.559804 1785.015135 2142.300827 2260.331212 2507.462871 1793.693558 2379.413556 2060.198168 1519.833133 1.182214322 1.272218484 1.174480998 1.409563181 1.487223276 1.649827745 1.180191113 1.565575525 1.355542344 1 10.56969722 -5.769047455 24.73546467 1.409441167 1.215895985 0.142657833 0.17813993 229.0619871 744731.3585 0.047294583 0.071705748 1.70E-06 5.769047455 -0.193545182 GLLYDS(ph)DEEDEERPARK ddPTM_A459_MK2206_30min_R2 2 GLLYDSDEEDEERPARK 17 2 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK 81.606 0.0059858 112528000 61578 132687 103522 111147 159189 120939 115916 78085 109651 109177 TRUE FALSE 66292.45903 126097.9565 106973.3718 102065.9346 152938.44 125541.4184 100696.09 88290.97761 119188.2458 105614.5634 0.627682934 1.193944778 1.012865729 0.966400194 1.448080975 1.188675258 0.953429969 0.835973513 1.128520934 1 16.68844926 -4.752584418 24.99132703 1.080909367 0.627682065 0.413663262 0.161865868 372.9947064 1052623.629 0.042967245 0.504402387 1.77E-05 4.752584418 -0.453227302 GLMAGGRPEGQYS(ph)EDEDTDTDEYK ddPTM_A459_MK2206_30min_R2 1 GLMAGGRPEGQYSEDEDTDTDEYK 24 1 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3;H0YC88 H0YE35 RIC8A Synembryn-A 1 GLMAGGRPEGQY(0.458)S(0.532)EDEDT(0.008)DT(0.001)DEYK 64.522 0.0016936 12386000 15061 11076 12368 11322 12887 7943.1 17057 11534 9271.1 14359 TRUE FALSE 16214.08174 10525.98195 12780.34295 10396.95638 12380.99163 8245.380236 14817.39541 13041.5334 10077.48352 13890.46701 1.167281254 0.757784597 0.920080149 0.748495812 0.89133012 0.59359993 1.066731263 0.938883725 0.725496379 1 13.76180748 -10.49342673 21.33382832 1 0.863116482 0.056521961 0.161111111 0 0 0.148527675 0.036023253 3.21E-11 10.49342673 -0.136883518 GLMAGGRPEGQYS(ph)EDEDTDTDEYKEAK ddPTM_A459_MK2206_30min_R2 3 GLMAGGRPEGQYSEDEDTDTDEYKEAK 27 2 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3;H0YC88 H0YE35 RIC8A Synembryn-A 1 GLMAGGRPEGQY(0.454)S(0.504)EDEDT(0.036)DT(0.004)DEY(0.001)KEAK;GLMAGGRPEGQY(0.194)S(0.773)EDEDT(0.025)DT(0.006)DEY(0.002)KEAK;GLMAGGRPEGQY(0.459)S(0.514)EDEDT(0.023)DT(0.002)DEY(0.002)KEAK 57.227 0.0030509 13898400 37183.7 65777 49491.2 42538.3 49073.6 39091.3 54358 48564 48248 48687 TRUE FALSE 40030.51266 62510.60983 51141.21191 39062.78482 47146.72389 40578.94681 47220.7293 54911.48155 52444.52383 47098.34718 0.849934553 1.327235743 1.085838781 0.829387593 1.001027142 0.861578999 1.002598438 1.165889778 1.113510919 1 15.52338881 -10.34890279 11.2387488 0.999996758 1.028957715 0.002554747 0.148146198 0 0 0.148042614 0.035905608 4.48E-11 10.34890279 0.028960957 GLNNDS(ph)PER ddPTM_A459_MK2206_30min_R2 1 GLNNDSPER 9 0 Q7Z6B7;Q7Z6B7-2;G5EA48 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 GLNNDS(1)PER 100.09 0.018229 22592000 92672 108610 102040 114020 114020 118920 120070 79001 114560 108750 TRUE FALSE 99767.03957 103216.5853 105441.9627 104704.2013 109543.0019 123445.5839 104304.6648 89326.70195 124524.2217 105201.4964 0.9483424 0.981132292 1.002285768 0.995272927 1.041268477 1.173420418 0.991475106 0.849101058 1.183673484 1 16.6827957 -5.425243002 1.307878445 1.03337707 0.953834287 0.095207412 0.089562102 1.637942129 4.784211171 0.029445676 0.127263405 3.76E-06 5.425243002 -0.079542784 GLNNDS(ph)PERR ddPTM_A459_MK2206_30min_R1 2 GLNNDSPERR 10 1 Q7Z6B7;Q7Z6B7-2;G5EA48 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 GLNNDS(1)PERR;GLNNDS(1)PERR 102.05 0.021543 38675000 7866.1 6254.5 6563.6 5865.4 6955.4 7255.7 7553.9 7330.5 4679 5960.9 TRUE FALSE 7197.046888 5847.330913 6118.081119 6317.154124 6678.35169 7666.511464 7049.993114 7266.410211 5165.398794 6699.381294 1.074285307 0.872816557 0.913230767 0.9429459 0.996860963 1.144361117 1.052334955 1.084638998 0.771026244 1 12.70981215 -4.429727655 20.16427461 0.982827015 7.986090633 0.07319006 0.10255641 625.7948385 135299.8361 0.025696145 245.4242586 3.72E-05 4.429727655 7.003263618 GLNPDGTPALS(ph)TLGGFSPAS(ph)KPSSPR ddPTM_A459_MK2206_30min_R2 1 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 2 GLNPDGT(0.001)PALS(0.988)T(0.01)LGGFS(0.001)PAS(0.416)KPS(0.292)S(0.291)PR 93.583 2.41E-05 9396900 15441 19616 19314 20128 20884 19191 30324 23886 21518 29591 TRUE FALSE 16623.17483 18641.89796 19957.91912 18483.47801 20063.98923 19921.32695 26342.42237 27007.98221 23389.59674 28625.44809 0.580713174 0.651235149 0.697208968 0.645700915 0.700914416 0.695930659 0.920244891 0.943495526 0.817091026 1 14.80501066 -7.209725307 3.681615153 0.917779521 0.659885117 0.854051201 0.05245251 0.087711856 2.445225067 0.021555616 0.015742929 6.17E-08 7.209725307 -0.257894404 GLNPDGTPALSTLGGFS(ph)PASKPS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 2 GLNPDGTPALS(0.007)T(0.001)LGGFS(0.983)PAS(0.115)KPS(0.556)S(0.34)PR 95.361 8.28E-06 21292000 1879.1 1944.1 1860.6 1713.8 1845.7 2110.2 2276 2589.5 2834.9 2551 TRUE FALSE 1719.272677 1817.538737 1734.307656 1845.797173 1772.181861 2229.6777 2124.172193 2566.860275 3129.598 2867.037139 0.599668785 0.633943213 0.604912867 0.643799534 0.618123092 0.777694042 0.740894551 0.895300671 1.091579163 1 11.48534488 -7.676569476 1.029218387 1.055073959 0.622281751 0.91694029 0.048722617 0.135467142 0.260756509 0.040708898 0.017215845 2.11E-08 7.676569476 -0.432792208 GLNPDGTPALSTLGGFSPASKPS(ph)S(ph)PR ddPTM_A459_MK2206_30min_R2 1 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 2 GLNPDGT(0.002)PALS(0.018)T(0.02)LGGFS(0.095)PAS(0.555)KPS(0.657)S(0.653)PR 57.922 0.038974 0 8613.2 17189 13826 11549 16472 13126 16063 10202 13126 14832 TRUE FALSE 9272.633214 16335.41926 14286.95194 10605.40976 15825.22651 13625.51913 13953.9088 11535.43643 14267.67575 14348.03305 0.646265114 1.138512798 0.995742893 0.73915426 1.102954423 0.949643695 0.97253113 0.803973366 0.99439942 1 13.80856535 -4.73843582 24.97186939 0.957960477 0.64626381 0.413235075 0.114023993 2060.66169 2236866.714 0.027986413 1.590203888 1.83E-05 4.73843582 -0.311696668 GLNPDGTPALSTLGGFSPASKPS(ph)SPR ddPTM_A459_MK2206_30min_R2 1 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 1 GLNPDGTPALSTLGGFS(0.001)PAS(0.104)KPS(0.447)S(0.447)PR 98.718 1.47E-06 22996000 33534 39722 23021 37872 34185 35888 50123 39212 48489 49251 TRUE FALSE 36101.38882 37749.46324 23788.50865 34777.73645 32842.72513 37253.74299 43541.78989 44337.14303 52706.48557 47643.9439 0.757733006 0.792324483 0.499297638 0.729950831 0.689336827 0.781919798 0.913899781 0.930593469 1.106257821 1 15.54000522 -7.391356076 1.237656099 1.038274084 0.686167993 0.757432249 0.080855417 0.233741015 0.684137366 0.057684081 0.029647885 4.06E-08 7.391356076 -0.352106091 GLNPDGTPALSTLGGFSPASKPSS(ph)PR ddPTM_A459_MK2206_30min_R1 2 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 1 GLNPDGTPALSTLGGFSPAS(0.008)KPS(0.239)S(0.753)PR;GLNPDGTPALSTLGGFS(0.002)PAS(0.013)KPS(0.343)S(0.642)PR 171.89 1.16E-17 66038000 4664 5468.5 5086 4625.3 5584.5 5522.6 6819.2 6777.6 7349.6 6574.8 TRUE FALSE 4267.302308 5112.499656 4740.77649 4981.541407 5362.05754 5835.284839 6364.30361 6718.344158 8113.617221 7389.335861 0.577494702 0.691875393 0.641570038 0.674152793 0.725648102 0.789690028 0.861282222 0.909194586 1.098017112 1 12.85122899 -7.339030044 0.775532314 1.047918839 0.63780495 0.921737512 0.044424443 0.161670447 0.187790494 0.035872079 0.020909491 4.58E-08 7.339030044 -0.410113889 GLNPDGTPALSTLGGFSPASKPSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 1 GLNPDGTPALSTLGGFSPAS(0.01)KPS(0.251)S(0.739)PR 137.05 2.05E-09 19946000 33437 49899 43467 58574 51175 54238 72055 50007 50540 78378 TRUE FALSE 35996.96243 47421.08822 44916.16809 53788.31683 49165.61237 56302.0651 62594.09195 56543.0866 54935.87784 75820.53228 0.474765362 0.625438609 0.592401118 0.709416239 0.648447207 0.742570164 0.825555955 0.745749006 0.724551466 1 16.21030096 -5.423939347 0.096916389 1.22079897 1.85E-13 0.837808461 0.054046312 19.4747393 0.385967446 1.321435433 3.897542056 3.77E-06 5.423939347 -1.22079897 down GLNSS(ph)FETSPK ddPTM_A459_MK2206_30min_R2 1 GLNSSFETSPK 11 0 M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63 M0QZ79 VRK3 Inactive serine/threonine-protein kinase VRK3 1 GLNS(0.038)S(0.344)FET(0.309)S(0.309)PK 103.43 0.013295 16562000 68972 64864 74515 59403 55632 42926 71477 61405 48870 78637 TRUE FALSE 74252.54935 61642.94808 76999.29291 54549.58488 53447.60815 44559.57901 62091.98404 69430.84433 53120.62426 76071.08113 0.976094309 0.810333535 1.012201901 0.71708702 0.702600875 0.585762399 0.816236382 0.912710104 0.698302475 1 16.21506049 -5.771777839 24.99972062 0.763141971 0.920622287 0.254579022 0.120984689 276.6179172 668897.8488 0.03409425 0.051196639 1.69E-06 5.771777839 0.157480316 GLNSSFETS(ph)PK ddPTM_A459_MK2206_30min_R2 2 GLNSSFETSPK 11 0 M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63 M0QZ79 VRK3 Inactive serine/threonine-protein kinase VRK3 1 GLNSSFET(0.202)S(0.798)PK;GLNS(0.001)S(0.003)FET(0.113)S(0.883)PK 119.39 0.0056476 30630000 318999 328155 296236 255998 288481 183908 330075 241405 205909 334927 TRUE FALSE 343421.8087 311859.2999 306112.3604 235082.1445 277153.7864 190906.7478 286735.756 272957.4624 223818.5926 323998.3594 1.059949221 0.962533577 0.94479602 0.725565848 0.855417253 0.589221341 0.884991382 0.842465569 0.690801623 1 18.30562698 -5.610671508 4.371580904 0.789397214 0.999960585 0.393737637 0.109579911 0.199795923 6.949164122 0.02891809 0.052401511 2.45E-06 5.610671508 0.210563371 GLPLGSAVS(ph)SPVLFSPVGR ddPTM_A459_MK2206_30min_R2 1 GLPLGSAVSSPVLFSPVGR 19 0 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 GLPLGS(0.004)AVS(0.498)S(0.498)PVLFS(0.001)PVGR 80.17 0.0064811 6763000 10231 11614 9842.4 9525.9 11166 10845 11224 6591 9076.7 10805 TRUE FALSE 11014.29323 11037.26565 10170.5407 8747.603498 10727.56674 11257.71407 9750.275318 7452.46633 9866.174959 10452.43373 1.05375394 1.055951746 0.973030871 0.836896336 1.026322386 1.077042377 0.932823452 0.712988622 0.943911744 1 13.35155128 -7.524197089 24.9983067 0.861651312 0.998794179 0.234438108 0.093835248 57.13669609 1083340.873 0.044058771 0.025689674 2.99E-08 7.524197089 0.137142867 GLPLGSAVSSPVLFS(ph)PVGR ddPTM_A459_MK2206_30min_R1 2 GLPLGSAVSSPVLFSPVGR 19 0 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 GLPLGSAVSSPVLFS(1)PVGR;GLPLGS(0.02)AVS(0.015)S(0.084)PVLFS(0.881)PVGR 253.73 4.76E-38 30382000 3912.2 3439 3523.1 3126.4 3519.6 3098.97 4140.1 3361.6 3354.1 3505.6 TRUE FALSE 3579.446846 3215.120475 3283.961788 3367.19587 3379.406879 3274.431003 3863.921483 3332.209886 3702.770698 3939.900194 0.908512061 0.816041097 0.833513954 0.85463989 0.85773921 0.831094912 0.980715575 0.845759974 0.939813324 1 11.94394337 -8.443353278 0.464015485 1.003870669 0.843541385 0.51074598 0.043921048 0.877821301 0.487309134 0.053079699 0.027661678 3.60E-09 8.443353278 -0.160329284 GLPLGSAVSSPVLFS(ph)PVGR ddPTM_A459_MK2206_30min_R2 2 GLPLGSAVSSPVLFSPVGR 19 0 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 GLPLGSAVS(0.002)S(0.002)PVLFS(0.996)PVGR;GLPLGSAVSSPVLFS(1)PVGR 136.33 0.00017685 16738200 47843 38807 43562 42714 39849 45052 40987 31012 35510 45032 TRUE FALSE 51505.89687 36879.90081 45014.33534 39224.12956 38284.32803 46766.48543 35605.35767 35065.37488 38598.59561 43562.60953 1.182341862 0.846595308 1.033325042 0.900408171 0.878834589 1.073546464 0.817337576 0.804942019 0.886048748 1 15.41080276 -4.752607049 24.99117558 0.913484612 1.182342377 0.459972238 0.086654908 317.2734601 897661.9004 0.021741017 0.254971394 1.77E-05 4.752607049 0.268857765 GLPPS(ph)MER ddPTM_A459_MK2206_30min_R1 6 GLPPSMER 8 0 P38159;P38159-2;H3BUY5 P38159 RBMX "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed" 1 GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER 159.34 0.00047511 458398000 36602 40155.2 38968.2 35652.7 45852.2 40282.6 44564.7 39071.4 35901.2 31479.7 TRUE FALSE 33488.8077 37541.08918 36323.14716 38398.67713 44025.80978 42563.366 41591.87018 38729.80287 39633.25821 35379.6429 0.946555843 1.061092937 1.026667998 1.085332524 1.244382537 1.203046795 1.17558762 1.094691741 1.120227763 1 15.11063187 -5.927457934 3.687718892 1.150543147 1.016606315 0.407052583 0.068045402 0.219068888 5.952405546 0.01997908 0.030510298 1.18E-06 5.927457934 -0.133936832 GLPPS(ph)MER ddPTM_A459_MK2206_30min_R2 11 GLPPSMER 8 0 P38159;P38159-2;H3BUY5 P38159 RBMX "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed" 1 GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER 156.83 0.00056044 527216200 1056449.4 1409868.3 1381934.9 1653055.3 1379476.9 1486754.1 1582347.8 1238884.6 1272785.1 1338274.3 TRUE FALSE 1137331.978 1339856.29 1428007.92 1517995.394 1325311.706 1543333.569 1374583.633 1400811.071 1383489.647 1294606.519 0.878515566 1.034952528 1.103043974 1.172553491 1.023717775 1.192125597 1.06177716 1.082036163 1.068656481 1 20.30408224 -4.7894016 2.590572506 1.093979053 0.835709796 0.555167539 0.056195723 0.331943627 2.938352241 0.013790169 0.189201358 1.62E-05 4.7894016 -0.258269258 GLPRFHSVSTQSEPHGSPIS(ph)R ddPTM_A459_MK2206_30min_R2 1 GLPRFHSVSTQSEPHGSPISR 21 1 A2ABL6;B7ZCJ6;B7ZL25;A0A140TA45;A0A140TA40;A0A0A0MTG1;B4E0K6;A0A140T8Y0;A0A0G2JIA5;A0A140TA36;A0A140TA35;A0A0G2JL52;Q5ST30;Q5ST30-4 A2ABL6 VARS2 "Valine--tRNA ligase, mitochondrial" 1 GLPRFHSVSTQSEPHGS(0.236)PIS(0.764)R 53.747 0.015947 25909000 120770 157010 124790 110410 138440 133360 101610 99680 93803 76137 TRUE FALSE 130016.2441 149213.1117 128950.4363 101389.1498 133004.15 138435.1082 88268.48494 112708.5183 101961.8154 73652.65593 1.765262127 2.025902662 1.750791396 1.376585115 1.805829652 1.879567091 1.198442661 1.53027093 1.384360334 1 16.16844993 -8.428061719 0.105114449 0.29247072 2.493895148 0.60296857 0.195888796 8.63548931 0.688854608 7.397542328 5.930651179 3.73E-09 8.428061719 2.201424428 GLPS(ph)PYNMSSAPGSR ddPTM_A459_MK2206_30min_R2 1 GLPSPYNMSSAPGSR 15 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 GLPS(0.816)PY(0.175)NMS(0.001)SAPGS(0.007)R 108.25 0.0058122 0 5846.5 6360 5727.1 7367.6 4816.3 4535.7 8219.4 5258.1 5128.2 5136.1 TRUE FALSE 6294.112535 6044.171648 5918.038656 6765.643512 4627.187862 4708.309242 7140.182907 5945.351724 5574.241566 4968.509478 1.266800952 1.216495948 1.191109463 1.361704862 0.931303016 0.947630122 1.437087509 1.196606699 1.121914246 1 12.2785974 -14.52287875 0.170628168 0.312878477 1.225978341 0.13060535 0.149861493 325.3965231 3.063672253 76.39946856 0.568993819 3.00E-15 14.52287875 0.913099864 GLPSPYNMSS(ph)APGSR ddPTM_A459_MK2206_30min_R1 3 GLPSPYNMSSAPGSR 15 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 GLPSPYNMS(0.233)S(0.758)APGS(0.008)R;GLPSPYNMS(0.218)S(0.747)APGS(0.035)R;GLPSPYNMS(0.23)S(0.761)APGS(0.009)R 144.4 0.00037347 54736000 7184.9 7574.9 8234.7 6746.4 7597.2 6488.4 7436.6 6897.2 6836.3 5975.9 TRUE FALSE 6573.786526 7081.772633 7675.751507 7266.008897 7294.587437 6855.767601 6940.517983 6836.898508 7546.957849 6716.239608 0.978789756 1.054425251 1.142864453 1.081856712 1.086111852 1.020774719 1.033393445 1.017965246 1.123687999 1 12.71343799 -6.755156516 24.99868741 1.039926432 1.072849472 0.081378277 0.048834092 401.0015901 1595528.051 0.01676464 0.016384513 1.76E-07 6.755156516 0.03292304 GLPSPYNMSS(ph)APGSR ddPTM_A459_MK2206_30min_R2 2 GLPSPYNMSSAPGSR 15 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 GLPSPYNMS(0.027)S(0.972)APGSR;GLPS(0.004)PY(0.004)NMS(0.079)S(0.911)APGS(0.003)R 178.22 1.97E-05 25928000 133268 134921 126015 113574 96958 110138 135427 96366 90329 126513 TRUE FALSE 143471.1005 128221.0193 130216.2772 104294.6409 93150.94175 114329.3788 117645.2722 108961.3671 98185.65314 122384.8912 1.17229422 1.047686672 1.063989811 0.852185592 0.761131058 0.934178865 0.961272843 0.890317146 0.802269399 1 16.90106594 -5.693921782 5.011972893 0.881293442 1.096061717 0.632320489 0.073124913 0.133373462 6.33917572 0.02074884 0.036206497 2.02E-06 5.693921782 0.214768275 GLPSPYNMSSAPGS(ph)R ddPTM_A459_MK2206_30min_R2 3 GLPSPYNMSSAPGSR 15 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 GLPSPYNMSSAPGS(1)R;GLPSPYNMSSAPGS(1)R;GLPSPYNMSSAPGS(1)R 165.16 8.84E-05 69458300 59453.8 73868.5 61407.4 79811.1 68425.4 74526.9 76964.4 64323.8 70036.5 59599.1 TRUE FALSE 64005.62864 70200.2977 63454.69207 73290.27783 65738.67499 77363.0734 66858.88183 72731.14152 76128.14817 57654.38625 1.110160611 1.217605498 1.100604762 1.271200382 1.140219839 1.341841938 1.159649529 1.261502311 1.320422489 1 15.81514275 GLPSTAS(ph)GR ddPTM_A459_MK2206_30min_R1 2 GLPSTASGR 9 0 P48730-2;H7BYT1;P48730 P48730-2 CSNK1D Casein kinase I isoform delta 1 GLPSTAS(1)GR;GLPSTAS(1)GR 117.02 0.0076638 33229000 6586.1 6563.5 5879 5372 7024.7 5890.4 7311.5 6329.4 5263 5599.3 TRUE FALSE 6025.91761 6136.214957 5479.94986 5785.752371 6744.891324 6223.909358 6823.763176 6274.062723 5810.107684 6292.983557 0.957561315 0.975088351 0.870803143 0.919397344 1.071811369 0.989023617 1.08434467 0.996993345 0.923267578 1 12.61952846 -6.238262805 24.6298253 1.013334171 0.929602985 0.390557542 0.049012302 697.8411708 741597.8627 0.014889959 0.019209175 5.78E-07 6.238262805 -0.083731186 GLPSTAS(ph)GR ddPTM_A459_MK2206_30min_R2 3 GLPSTASGR 9 0 P48730-2;H7BYT1;P48730 P48730-2 CSNK1D Casein kinase I isoform delta 1 GLPSTAS(1)GR;GLPSTAS(1)GR;GLPS(0.001)T(0.009)AS(0.99)GR 115.91 0.0080154 71589000 149101 158877 125808 140894 169446 156793 166150 429192 188546 154440 TRUE FALSE 160516.2872 150987.3992 130002.3759 129382.5095 162792.6986 162759.8675 144334.3054 485288.868 204945.3903 149400.6354 1.074401636 1.010620864 0.870159458 0.866010436 1.089638596 1.089418843 0.966088966 3.248238313 1.371783926 1 17.18882676 GLPTGDS(ph)PLGPMTHR ddPTM_A459_MK2206_30min_R1 1 GLPTGDSPLGPMTHR 15 0 J3QQZ9;Q9NVS9-4;Q9NVS9-3;Q9NVS9 J3QQZ9 PNPO Pyridoxine-5-phosphate oxidase 1 GLPTGDS(1)PLGPMTHR 141.6 0.00025454 11219000 5133.1 5066 5288.2 4258.9 4863.9 4246.9 5026.2 4483.8 4463.5 4185.7 TRUE FALSE 4696.50289 4736.202479 4929.251718 4586.921216 4670.160564 4487.355808 4690.911369 4444.598609 4927.496798 4704.256116 0.99835187 1.006790949 1.047828093 0.975057714 0.99275219 0.953892751 0.997163261 0.944803705 1.047455044 1 12.19975089 -5.790420353 24.99995125 0.984249407 1.016570417 0.180903924 0.029066605 304.9261783 263038.2321 0.007759274 0.0115111 1.62E-06 5.790420353 0.03232101 GLPTGDS(ph)PLGPMTHR ddPTM_A459_MK2206_30min_R2 3 GLPTGDSPLGPMTHR 15 0 J3QQZ9;Q9NVS9-4;Q9NVS9-3;Q9NVS9 J3QQZ9 PNPO Pyridoxine-5-phosphate oxidase 1 GLPTGDS(1)PLGPMTHR;GLPT(0.012)GDS(0.988)PLGPMTHR;GLPT(0.397)GDS(0.603)PLGPMTHR 157.42 0.00010248 28643500 98942 125373 111366 113134 102603 107830 106997 83671 103729 95173 TRUE FALSE 106517.0756 119147.1591 115078.8869 103890.5903 98574.29068 111933.5462 92948.16537 94607.08699 112751.1609 92067.5128 1.156945293 1.29412814 1.249940216 1.128417475 1.070673983 1.215776801 1.009565291 1.027583825 1.224657401 1 16.49040455 -5.849766242 4.217815344 1.09533795 1.239965677 0.389445883 0.079370463 0.216034069 7.085153875 0.02230811 0.034731402 1.41E-06 5.849766242 0.144627727 GLQLT(ph)PGIGGMQQHFFDDEDR ddPTM_A459_MK2206_30min_R1 7 GLQLTPGIGGMQQHFFDDEDR 21 0 P12270 P12270 TPR Nucleoprotein TPR 1 GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR 172.74 1.50E-10 107161900 27051.1 29162.3 21266.5 14941.66 16198.1 12873.81 11309.51 8470.23 8919.17 8679.66 TRUE FALSE 24750.26189 27263.82897 19822.98923 16092.46924 15552.89538 13602.714 10555.07322 8396.175672 9846.349639 9754.961809 2.537197211 2.794867833 2.032092962 1.649670143 1.594357383 1.394440518 1.082020968 0.860708205 1.009368343 1 13.25192051 -5.717200326 0.564992351 0.916583432 3.112813134 0.942405579 0.152934957 0.347767522 0.170993671 0.10366901 0.445582676 1.92E-06 5.717200326 2.196229702 up GLQLT(ph)PGIGGMQQHFFDDEDR ddPTM_A459_MK2206_30min_R2 10 GLQLTPGIGGMQQHFFDDEDR 21 0 P12270 P12270 TPR Nucleoprotein TPR 1 GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR 155.73 2.50E-07 74817900 205668.7 223302.7 196918.5 186433.8 103596.7 119899.9 84488.6 67575.9 67466.9 82522.1 TRUE FALSE 221414.8538 212213.8126 203483.6645 171201.5622 99528.97303 124462.7747 73395.14533 76408.30215 73335.04901 79829.41064 2.773600006 2.658341217 2.54898117 2.144592586 1.246770736 1.559109277 0.919399815 0.957144761 0.918647005 1 16.28463274 -6.171135706 0.956840582 0.954318212 2.828444197 0.95546093 0.156070991 0.106894562 0.205086413 0.071167543 0.125729096 6.74E-07 6.171135706 1.874125985 up GLQT(ph)PVKDAGGGTGR ddPTM_A459_MK2206_30min_R1 1 GLQTPVKDAGGGTGR 15 1 O15061;A0A075B7B1;O15061-2;H0YL34 O15061 SYNM Synemin 1 GLQT(1)PVKDAGGGTGR 140.68 0.0040267 5550200 1691.4 1414.5 1177.4 1327.5 1760 1161 1223.3 1510.3 1012.5 750.14 TRUE FALSE 1547.537548 1322.415793 1097.481368 1429.74428 1689.895473 1226.734817 1141.695889 1497.095606 1117.752998 843.0730065 1.835591386 1.568566165 1.301763145 1.695872444 2.004447373 1.455075429 1.354207619 1.775760337 1.325808073 1 9.719513757 -8.53424694 4.440086444 1.000499234 1.610496088 0.477160915 0.206938704 0.15508831 10.75985571 0.206417546 0.053882326 2.92E-09 8.53424694 0.609996854 GLQT(ph)PVKDAGGGTGR ddPTM_A459_MK2206_30min_R2 1 GLQTPVKDAGGGTGR 15 1 O15061;A0A075B7B1;O15061-2;H0YL34 O15061 SYNM Synemin 1 GLQT(1)PVKDAGGGTGR 147.49 0.0033471 7984800 22630 33769 23497 26597 34947 29590 34122 24038 24090 30581 TRUE FALSE 24362.5702 32092.08056 24280.37825 24423.94002 33574.80519 30716.06818 29641.74041 27179.84913 26185.30466 29583.14447 0.823528757 1.084809649 0.82075042 0.825603243 1.134930238 1.038296257 1.00198072 0.918761329 0.885142709 1 14.85248779 -6.231294576 24.98482934 0.994818667 0.897831177 0.232356258 0.095421889 1250.918638 1036795.369 0.029485 0.038060347 5.87E-07 6.231294576 -0.09698749 GLQTSQDAR ddPTM_A459_MK2206_30min_R2 1 GLQTSQDAR 9 0 P27797 P27797 CALR Calreticulin 0 134.77 0.038838 6152700 33871 37371 31921 40149 40141 35134 37672 27572 32983 31199 FALSE TRUE 36464.1898 35515.21048 32985.23021 36868.69827 38564.86265 36471.04899 32725.62115 31175.75507 35851.80172 30180.97919 1.208184452 1.176741492 1.092914514 1.221587214 1.277786993 1.208411721 1.08431277 1.032960358 1.187893922 1 14.88135199 -7.267305904 21.61231102 1.079038391 1.19663225 0.475748358 0.062355162 72.85804282 268403.0395 0.026326878 0.018361805 5.40E-08 7.267305904 0.11759386 GLQVDLQS(ph)DGAAAEDIVASEQSLGQK ddPTM_A459_MK2206_30min_R1 2 GLQVDLQSDGAAAEDIVASEQSLGQK 26 0 A0A3B3ITP6;A0A3B3IT92;P33991;A0A3B3IS57;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 GLQVDLQS(0.94)DGAAAEDIVAS(0.057)EQS(0.003)LGQK;GLQVDLQS(1)DGAAAEDIVASEQSLGQK 114.01 6.41E-09 12070700 2431.3 2190.24 2325.96 2371.7 2324.58 2101.89 2397.74 2260.29 2290.54 2211.23 TRUE FALSE 2224.505168 2047.654978 2168.080316 2554.368745 2231.987056 2220.897195 2237.79114 2240.528523 2528.64983 2485.173866 0.895110478 0.823948379 0.872405889 1.027843073 0.898121088 0.893658679 0.900456572 0.901558057 1.017494134 1 11.27913107 -1.522878748 0.054143434 1.156623461 0.457979648 0.321762333 0.053019617 554.0770952 2.263907205 6.473049357 31.50339379 0.03 1.522878748 -0.698643813 GLS(ph)APDLR ddPTM_A459_MK2206_30min_R1 2 GLSAPDLR 8 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 GLS(1)APDLR;GLS(1)APDLR 114.86 0.010127 30711000 13740.4 11837.3 12910.5 11367.5 14567.5 12939.6 14261.3 13593.9 13068.1 11289.1 TRUE FALSE 12571.70683 11066.68962 12034.17123 12243.02682 13987.24563 13672.22897 13309.9547 13475.04997 14426.57576 12687.67894 0.99085947 0.872239097 0.94849273 0.964954022 1.102427457 1.077598908 1.049045674 1.062057925 1.137053974 1 13.63114055 -6.130120211 3.945796953 1.073474148 0.933713961 0.678917824 0.043023566 0.129370639 3.480174157 0.012554574 0.016679067 7.41E-07 6.130120211 -0.139760188 GLS(ph)APDLR ddPTM_A459_MK2206_30min_R2 4 GLSAPDLR 8 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 GLS(1)APDLR;GLS(1)APDLR;GLS(1)APDLR;GLS(1)APDLR 142.36 0.0022197 55040700 352572 405534 358708 422320 395389 455274 450987 350642 407156 406908 TRUE FALSE 379565.1834 385395.7713 370667.1457 387815.1051 379864.0412 472599.7711 391771.8652 396472.1133 442569.6929 393630.6253 0.96426741 0.979079743 0.941662365 0.985225946 0.965026644 1.200617383 0.995277908 1.007218666 1.124327388 1 18.58648294 -6.623343117 22.27800135 1.063920151 0.967261529 0.405567852 0.05956696 5.946580776 1306.187661 0.019150493 0.019150495 2.38E-07 6.623343117 -0.096658622 GLS(ph)EDTTEETLK ddPTM_A459_MK2206_30min_R1 1 GLSEDTTEETLK 12 0 P19338;H7BY16 P19338 NCL Nucleolin 1 GLS(0.819)EDT(0.146)T(0.035)EETLK 102.97 0.012562 0 480.05 579.94 427.13 276.49 613.05 604.63 570.73 483.09 563.12 489.71 TRUE FALSE 439.2192267 542.1858006 398.1376057 297.7853077 588.6309203 638.8636281 532.6576431 478.8663951 621.6583391 550.3789719 0.798030537 0.985113582 0.723388112 0.541055024 1.069501108 1.160770416 0.967801588 0.870066662 1.129509612 1 9.10428154 -6.296295061 24.9882349 1.029579378 0.775090163 0.521607036 0.126889054 555.8860039 398516.2959 0.042060195 0.047693774 5.05E-07 6.296295061 -0.254489214 GLS(ph)EDTTEETLK ddPTM_A459_MK2206_30min_R2 1 GLSEDTTEETLK 12 0 P19338;H7BY16 P19338 NCL Nucleolin 1 GLS(0.55)EDT(0.183)T(0.266)EETLK 97.551 0.016098 2098900 10750 11063 11639 13071 9402.8 10657 11676 11882 9031.5 11810 TRUE FALSE 11573.02827 10513.62751 12027.03845 12003.05749 9033.598827 11062.5596 10142.92717 13435.0182 9817.043545 11424.64067 1.012988382 0.920258922 1.052727941 1.050628885 0.790711856 0.968307006 0.887811483 1.175968557 0.859286855 1 13.47986117 -10.37570163 9.670715615 1.000015907 0.970661303 0.007547396 0.105483887 0 0 0.098805988 0.023963972 4.21E-11 10.37570163 -0.029354603 GLS(ph)GEEEDDEPDCCNDER ddPTM_A459_MK2206_30min_R1 2 GLSGEEEDDEPDCCNDER 18 0 Q6P158;A0A087WW12;A0A087WZ11;Q6P158-3;Q6P158-2 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 1 GLS(1)GEEEDDEPDCCNDER;GLS(1)GEEEDDEPDCCNDER 241.66 3.78E-25 38174000 2210.99 1800.33 2118.4 1370.24 1945.52 1457.33 2222.9 1480.6 1714 1560.04 TRUE FALSE 2022.93369 1683.12819 1974.60891 1475.776122 1868.025819 1539.842765 2074.614397 1467.65527 1892.176434 1753.309533 1.153780124 0.959972075 1.126218088 0.841708834 1.065428428 0.87824924 1.183256212 0.837077106 1.07920273 1 10.775865 -3.12197473 1.960840013 0.994050549 90.08385548 0.139224864 0.113698159 1462.887971 12.74175741 0.027352482 583834.5417 0.000755136 3.12197473 89.08980493 GLS(ph)GEEEDDEPDCCNDER ddPTM_A459_MK2206_30min_R2 3 GLSGEEEDDEPDCCNDER 18 0 Q6P158;A0A087WW12;A0A087WZ11;Q6P158-3;Q6P158-2 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 1 GLS(1)GEEEDDEPDCCNDER;GLS(1)GEEEDDEPDCCNDER;GLS(1)GEEEDDEPDCCNDER 325.33 1.46E-127 175919400 27068 29934 25089.4 32044 27995.4 30439.5 33134.4 26119 26627 29044.4 TRUE FALSE 29140.34689 28447.52109 25925.86807 29425.9027 26896.15993 31597.8965 28783.81348 29532.84298 28942.96833 28096.68361 1.037145426 1.012486793 0.92273766 1.047308754 0.957271695 1.124613031 1.024455907 1.051114907 1.030120449 1 14.77811223 -6.728740599 24.99999858 1.047905441 0.995188033 0.237799815 0.045297293 273.2100927 208883.3204 0.01438526 0.014384321 1.87E-07 6.728740599 -0.052717407 GLS(ph)GPCRPPPPPQAR ddPTM_A459_MK2206_30min_R1 4 GLSGPCRPPPPPQAR 15 1 Q9UEE5 Q9UEE5 STK17A Serine/threonine-protein kinase 17A 1 GLS(1)GPCRPPPPPQAR;GLS(1)GPCRPPPPPQAR;GLS(1)GPCRPPPPPQAR;GLS(1)GPCRPPPPPQAR 141.59 0.001827 19778000 8583.8 8253.67 7905.7 7144.8 8776.1 7647.83 7789.42 7458.05 6813.54 7179.03 TRUE FALSE 7853.702735 7716.354583 7369.083111 7695.093734 8426.529353 8080.843525 7269.802004 7392.845055 7521.831865 8068.422435 0.973387648 0.956364722 0.913323908 0.953729654 1.044383759 1.001539469 0.901019011 0.916268963 0.932255584 1 12.97807091 -9.991338638 9.892703161 1 0.954807284 0.097152666 0.041430048 0 0 0.044558766 0.010807088 1.02E-10 9.991338638 -0.045192716 GLS(ph)PADVAQEHLK ddPTM_A459_MK2206_30min_R2 2 GLSPADVAQEHLK 13 0 P10070 P10070 GLI2 Zinc finger protein GLI2 1 GLS(1)PADVAQEHLK;GLS(1)PADVAQEHLK 139.49 0.00061647 6578200 62622 70301 63433 74497 71004 65695 80151 53583 49957 73834 TRUE FALSE 67416.38847 66809.95457 65547.82456 68410.3568 68216.02619 68195.06926 69627.07742 60586.48208 54302.16956 71424.80263 0.943879241 0.935388718 0.917717966 0.957795532 0.95507476 0.954781347 0.974830519 0.848255506 0.760270488 1 16.12413752 -7.769772255 24.99703523 0.853197209 0.9476601 0.276264778 0.056761714 195.7016569 587056.7406 0.028574644 0.014082939 1.70E-08 7.769772255 0.09446289 GLS(ph)PAMSPALQR ddPTM_A459_MK2206_30min_R2 2 GLSPAMSPALQR 12 0 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 GLS(0.748)PAMS(0.252)PALQR;GLS(0.991)PAMS(0.009)PALQR 114.87 0.005396 10127400 49535 43758 51987 43250 41009 41451 49958 40287 38659 52987 TRUE FALSE 53327.43769 41585.04135 53720.22063 39716.33665 39398.78061 43028.44685 43398.45459 45552.64923 42021.48994 51258.03853 1.040372188 0.811288191 1.048035043 0.774831378 0.768636135 0.839447784 0.846666315 0.888692789 0.819802925 1 15.64549065 -1.575898191 1.044748074 0.853970739 199.9999978 0.221081197 0.089505572 2585.473671 3.301819241 0.027844964 1233420.57 0.026552279 1.575898191 199.146027 GLS(ph)PAQADSQFLENAK ddPTM_A459_MK2206_30min_R2 1 GLSPAQADSQFLENAK 16 0 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 GLS(1)PAQADSQFLENAK 127.57 0.0010266 2872200 9458.5 11322 11198 9333.9 10252 9587.5 13009 10457 10788 12504 TRUE FALSE 10182.65003 10759.76594 11571.33573 8571.290512 9849.454968 9952.359031 11300.90267 11823.7658 11726.32074 12095.9955 0.841819925 0.889531245 0.956625333 0.70860563 0.814274027 0.82278131 0.934268095 0.977494229 0.969438252 1 13.56224189 -7.429288665 3.268847496 0.978377489 0.839620298 0.550287905 0.059196104 0.220207916 4.472037912 0.030206175 0.018627487 3.72E-08 7.429288665 -0.138757191 GLS(ph)QEGTGPPTSAGEGHSR ddPTM_A459_MK2206_30min_R2 1 GLSQEGTGPPTSAGEGHSR 19 0 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4;Q63HN8-5 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 GLS(0.995)QEGT(0.005)GPPTSAGEGHSR 133.27 0.0001523 8516400 13815 14325 10646 16379 19830 20210 18554 10564 18394 14804 TRUE FALSE 14872.68702 13613.64133 11000.93233 15040.78331 19051.37456 20979.10571 16117.83751 11944.75107 19993.87687 14320.94669 1.038526806 0.950610433 0.768170748 1.050264597 1.330315305 1.464924503 1.125472908 0.834075521 1.396128154 1 13.80583925 -6.001737545 23.92293699 1.193536471 0.920080753 0.305879461 0.185133106 49.84099216 686269.7458 0.054774847 0.079799115 9.96E-07 6.001737545 -0.273455718 GLS(ph)SAGGGSPHREDAQPEHSASAR ddPTM_A459_MK2206_30min_R1 1 GLSSAGGGSPHREDAQPEHSASAR 24 1 Q92994-9;Q92994-3;Q92994-7;Q92994-8;Q92994-5;Q92994 Q92994-9 BRF1 Transcription factor IIIB 90 kDa subunit 1 GLS(0.454)S(0.454)AGGGS(0.091)PHREDAQPEHSASAR 51.31 0.014322 18561000 1896.5 1538.4 1739.2 1410 1928.7 1800.2 1985.7 1807.3 1281.3 1617.4 TRUE FALSE 1735.192716 1438.24988 1621.14795 1518.598444 1851.875795 1902.125768 1853.237576 1791.498967 1414.49572 1817.775723 0.954569199 0.791214154 0.891830565 0.835415737 1.01875923 1.046402889 1.019508377 0.985544555 0.778146447 1 10.8279585 -6.258438771 24.92117438 0.979827017 0.864438118 0.297567571 0.079821912 314.8346446 2614817.785 0.024355115 0.030111656 5.52E-07 6.258438771 -0.115388899 GLS(ph)SAGGGSPHREDAQPEHSASAR ddPTM_A459_MK2206_30min_R2 2 GLSSAGGGSPHREDAQPEHSASAR 24 1 Q92994-9;Q92994-3;Q92994-7;Q92994-8;Q92994-5;Q92994 Q92994-9 BRF1 Transcription factor IIIB 90 kDa subunit 1 GLS(0.398)S(0.353)AGGGS(0.248)PHREDAQPEHSASAR;GLS(0.459)S(0.459)AGGGS(0.083)PHREDAQPEHSASAR 41.904 0.04106 37944400 19433.2 28645 22644.2 35913 36654.7 39096 36310.9 29508 34319 27545.8 TRUE FALSE 20921.02073 27222.53095 23399.14633 32978.79302 35215.4523 40583.82568 31543.23521 33364.79692 37304.00459 26646.9828 0.785117808 1.021598999 0.878116164 1.23761828 1.32155496 1.523017671 1.183745096 1.252104119 1.399933526 1 14.70168457 -5.817412092 4.637431595 1.297837936 0.905849326 0.605192795 0.139834349 0.128865022 5.659867072 0.038536228 0.06023473 1.52E-06 5.817412092 -0.39198861 GLSAS(ph)LPDLDSENWIEVK ddPTM_A459_MK2206_30min_R1 4 GLSASLPDLDSENWIEVK 18 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;H0YC73 Q6PKG0 LARP1 La-related protein 1 1 GLS(0.244)AS(0.755)LPDLDS(0.001)ENWIEVK;GLS(0.005)AS(0.977)LPDLDS(0.018)ENWIEVK;GLSAS(1)LPDLDSENWIEVK;GLS(0.044)AS(0.949)LPDLDS(0.007)ENWIEVK 273.52 2.61E-54 509398500 14282.8 14742.6 12648.8 11664.8 12225.9 12147.8 12709.7 12878 12777.8 10810 TRUE FALSE 13067.97286 13782.85406 11790.2347 12563.22492 11738.91651 12835.59794 11861.8591 12765.409 14106.09804 12149.22441 1.075621983 1.134463699 0.970451635 1.034076291 0.966227647 1.056495255 0.976347024 1.050718019 1.161069839 1 13.5685766 -10.52790359 13.57444502 0.999999999 1.043093934 0.045069704 0.062677222 0 0 0.061677092 0.014958892 2.97E-11 10.52790359 0.043093934 GLSAS(ph)LPDLDSENWIEVK ddPTM_A459_MK2206_30min_R2 2 GLSASLPDLDSENWIEVK 18 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;H0YC73 Q6PKG0 LARP1 La-related protein 1 1 GLS(0.098)AS(0.795)LPDLDS(0.107)ENWIEVK;GLS(0.001)AS(0.998)LPDLDSENWIEVK 186.17 1.83E-10 208117000 576373.7 559853.3 502606.1 613691.6 582192.9 539447 692184.3 556862.4 568318.1 662187.6 TRUE FALSE 620501.3136 532051.7992 519362.7365 563551.0332 559333.0815 559976.0336 601299.6699 629646.2277 617749.3811 640580.4728 0.968654744 0.830577612 0.810768917 0.879750565 0.873165988 0.87416969 0.938679363 0.982930724 0.964358745 1 19.28902029 -7.418398888 2.05905426 0.982159347 0.866712627 0.609523847 0.039665812 0.226616729 1.879822765 0.022165076 0.012500978 3.82E-08 7.418398888 -0.11544672 GLSASLPDLDS(ph)ENWIEVK ddPTM_A459_MK2206_30min_R1 1 GLSASLPDLDSENWIEVK 18 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;H0YC73 Q6PKG0 LARP1 La-related protein 1 1 GLS(0.001)AS(0.123)LPDLDS(0.876)ENWIEVK 101.71 0.0024767 10783000 852.43 913.99 883.37 891.03 913.47 914.69 805.58 967.87 1179.7 832.74 TRUE FALSE 779.9263522 854.4890849 823.4093056 959.657285 877.0845556 966.4789573 751.8412281 959.4080146 1302.334037 935.9061181 0.833338235 0.913007265 0.879799042 1.025377724 0.937150146 1.032666566 0.80332975 1.025111383 1.391522089 1 9.870220008 -8.009839301 24.45978876 1.199946335 0.924658844 0.495572666 0.111289786 255.058128 634051.5733 0.061835112 0.02688042 9.78E-09 8.009839301 -0.275287491 GLSAST(ph)MDLSSSS ddPTM_A459_MK2206_30min_R1 2 GLSASTMDLSSSS 13 0 Q9NSK0-5;Q9NSK0;Q9NSK0-3 Q9NSK0-5 KLC4 Kinesin light chain 4 1 GLS(0.02)AS(0.103)T(0.877)MDLSSSS;GLS(0.013)AS(0.084)T(0.903)MDLSSSS 123.67 0.0056317 8695000 4962.3 4993.8 4436.4 4040.4 5457.7 4936.9 5113.8 4530.6 4643.8 3674.3 TRUE FALSE 4540.230327 4668.702712 4135.269529 4351.592308 5240.308252 5216.423012 4772.667733 4490.989442 5126.539628 4129.500024 1.099462478 1.130573359 1.001397144 1.053781882 1.268993394 1.263209343 1.155749535 1.087538302 1.241443177 1 12.0117514 -6.231622011 24.86385004 1.177864936 1.070543918 0.246538677 0.083316415 900.1064102 750572.949 0.024697616 0.031879689 5.87E-07 6.231622011 -0.107321017 GLSDHVS(ph)LDGQELGTR ddPTM_A459_MK2206_30min_R1 2 GLSDHVSLDGQELGTR 16 0 Q7L8J4;Q7L8J4-2 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 GLSDHVS(1)LDGQELGTR;GLSDHVS(1)LDGQELGTR 174.35 3.04E-06 59289000 2408.4 1942.59 2186.9 1824.02 2834.4 2683.1 2477.3 2415 2087.5 1977.91 TRUE FALSE 2203.552933 1816.127038 2038.459321 1964.506336 2721.499846 2835.014803 2312.043837 2393.88591 2304.503095 2222.948423 0.991274881 0.816990182 0.917007025 0.883739054 1.224274849 1.275339893 1.040079839 1.07689674 1.036687613 1 11.11825876 -6.24550141 24.58619476 1.117607662 0.897216449 0.559722448 0.089532936 494.5982763 762975.4762 0.027740703 0.0356892 5.68E-07 6.24550141 -0.220391214 GLSDHVS(ph)LDGQELGTR ddPTM_A459_MK2206_30min_R2 3 GLSDHVSLDGQELGTR 16 0 Q7L8J4;Q7L8J4-2 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 GLS(0.001)DHVS(0.999)LDGQELGTR;GLSDHVS(1)LDGQELGTR;GLS(0.007)DHVS(0.993)LDGQELGTR 98.408 0.0091399 18562100 38787.6 63276 51815.2 73244 69778 72723 69463 51835 59961.4 51644.3 TRUE FALSE 41757.20848 60133.80585 53542.69291 67259.7309 67038.16511 75490.52472 60342.42466 58610.01248 65176.73419 49959.15072 0.835827028 1.203659489 1.071729446 1.346294521 1.341859582 1.511044996 1.207835277 1.173158703 1.304600524 1 15.60846133 -4.241241902 1.101952198 1.275929934 3.25E-16 0.430489632 0.138964982 4.503561934 1.983778887 0.042929169 8.922466581 5.74E-05 4.241241902 -1.275929934 GLSEDTTEETLKESFDGSVR ddPTM_A459_MK2206_30min_R1 2 GLSEDTTEETLKESFDGSVR 20 1 P19338;H7BY16 P19338 NCL Nucleolin 0 ; 222.09 2.96E-19 34377000 5949.4 5831.6 6288.6 5440.6 6100.2 5754.5 6053.4 6092.6 4123.1 3838.6 FALSE TRUE 5443.372288 5451.96178 5861.747353 5859.635955 5857.216117 6080.314817 5649.588731 6039.333041 4551.711 4314.154748 1.261747111 1.263738113 1.358724407 1.358234996 1.357674089 1.409387278 1.309547075 1.399887902 1.055064379 1 12.07486221 -8.327072779 5.296348011 1.01194917 1.340387704 0.869937658 0.048366969 0.076192899 4.093326706 0.048226078 0.012767911 4.71E-09 8.327072779 0.328438534 GLSHS(ph)PWAVK ddPTM_A459_MK2206_30min_R1 2 GLSHSPWAVK 10 0 Q96KB5;Q96KB5-2;E5RFX4 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 GLS(0.001)HS(0.999)PWAVK;GLS(0.001)HS(0.999)PWAVK 143.24 0.0011118 42049000 8756.2 8748.8 7654.4 6710.1 6807.1 7531.7 8423.7 6595.4 7025.4 7229.2 TRUE FALSE 8011.439209 8179.25153 7134.840654 7226.913065 6535.958793 7958.138345 7861.770343 6537.737113 7755.715471 8124.807874 0.986046604 1.006700916 0.878155 0.889487256 0.80444472 0.979486342 0.967625385 0.804663595 0.954572169 1 12.98811798 -5.255994713 24.79075004 0.902893239 0.996373771 0.214531101 0.065194606 541.3696677 2464951.974 0.016458664 0.040920378 5.55E-06 5.255994713 0.093480532 GLSHS(ph)PWAVK ddPTM_A459_MK2206_30min_R2 1 GLSHSPWAVK 10 0 Q96KB5;Q96KB5-2;E5RFX4 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 GLSHS(1)PWAVK 114.86 0.0068265 10762000 101970 83746 83183 104530 86966 85575 99207 68428 74673 102050 TRUE FALSE 109776.9016 79587.29542 85956.2797 95989.56463 83551.27787 88831.61659 86181.00173 77371.77455 81167.92256 98720.11686 1.112001334 0.80619126 0.870706827 0.972340468 0.846345006 0.899832976 0.872983182 0.783748814 0.822202456 1 16.59105648 -4.751876526 24.99323912 0.87090657 1.112001813 0.542384515 0.065234167 295.1200293 771264.1329 0.016082711 0.202854562 1.77E-05 4.751876526 0.241095243 GLSLVDKENT(ph)PPALSGTR ddPTM_A459_MK2206_30min_R2 1 GLSLVDKENTPPALSGTR 18 1 P31350-2;P31350;A0A286YFD6 P31350-2 RRM2 Ribonucleoside-diphosphate reductase subunit M2 1 GLSLVDKENT(0.829)PPALS(0.148)GT(0.023)R 108.97 0.015352 5521900 23203 21647 18697 19305 20595 17812 19769 17010 15157 22096 TRUE FALSE 24979.43952 20572.04146 19320.34865 17727.71975 19786.33682 18489.84814 17173.30655 19233.2654 16475.32846 21375.00933 1.168628239 0.962434268 0.903875566 0.829366644 0.925676172 0.865021758 0.803429196 0.899801498 0.770775264 1 14.38363743 -4.475977872 1.314065751 0.865021134 1.520779951 0.678142057 0.06144598 1.422806418 1.288238894 0.016722103 1.516936818 3.34E-05 4.475977872 0.655758817 GLSLVDKENTPPALS(ph)GTR ddPTM_A459_MK2206_30min_R2 1 GLSLVDKENTPPALSGTR 18 1 P31350-2;P31350;A0A286YFD6 P31350-2 RRM2 Ribonucleoside-diphosphate reductase subunit M2 1 GLSLVDKENT(0.256)PPALS(0.372)GT(0.372)R 59.618 0.02872 56496000 30748 29491 30428 33466 30873 27632 35793 26016 25159 34755 TRUE FALSE 33102.09052 28026.51982 31442.45433 30731.72075 29660.7709 28683.55512 31093.3361 29416.38053 27347.28434 33620.9472 0.984567458 0.833602922 0.935204298 0.914064692 0.882211043 0.853145361 0.924820349 0.874942052 0.813400175 1 15.03707275 -4.737357751 24.75455955 0.88995502 0.984567927 0.221941139 0.051605017 2864.580456 2944455.246 0.012075776 0.751648627 1.83E-05 4.737357751 0.094612907 GLSQEGT(ph)GPPTSAGEGHSR ddPTM_A459_MK2206_30min_R2 1 GLSQEGTGPPTSAGEGHSR 19 0 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4;Q63HN8-5 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 GLS(0.015)QEGT(0.917)GPPT(0.049)S(0.019)AGEGHSR 66.261 0.030735 7757700 8493.7 9814.2 11080 11285 13587 14749 12154 10317 11388 12676 TRUE FALSE 9143.984203 9326.841099 11449.40167 10362.9794 13053.50611 15310.28353 10558.1652 11665.46732 12378.50766 12262.38316 0.74569389 0.76060591 0.933701184 0.845103213 1.064516248 1.248556935 0.861020657 0.951321385 1.009469978 1 13.58195177 -5.539029028 1.270299498 1.015218359 0.733434918 0.485588264 0.102552116 0.509277427 1.488096295 0.036342242 0.131201461 2.89E-06 5.539029028 -0.281783441 GLSQNQQIPQNSVT(ph)PR ddPTM_A459_MK2206_30min_R2 2 GLSQNQQIPQNSVTPR 16 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 GLSQNQQIPQNS(0.001)VT(0.999)PR;GLSQNQQIPQNS(0.014)VT(0.986)PR 206.81 1.79E-07 16638700 37516 39464 30683 40761 33673 51259 46607 38229 29788 34699 TRUE FALSE 40388.2538 37504.27515 31705.95591 37430.69591 32350.82883 53209.69716 40487.44491 43225.66156 32378.9064 33566.77447 1.203221175 1.117303516 0.944563677 1.11511149 0.963775321 1.585189462 1.206176213 1.287751422 0.96461179 1 15.03474629 GLSSAGGGS(ph)PHR ddPTM_A459_MK2206_30min_R2 1 GLSSAGGGSPHR 12 0 Q92994-9;Q92994-3;Q92994-7;Q92994-8;Q92994-5;Q92994 Q92994-9 BRF1 Transcription factor IIIB 90 kDa subunit 1 GLSSAGGGS(1)PHR 97.45 0.010939 0 13136 10766 10249 13692 11853 15892 17304 13835 10682 17238 TRUE FALSE 14141.70226 10231.3761 10590.69654 12573.3198 11387.59166 16496.7812 15031.96401 15643.282 11611.10105 16675.52547 0.848051372 0.613556443 0.635104217 0.753998417 0.682892523 0.989281041 0.901438701 0.938098294 0.696295962 1 14.0254446 -6.748583346 24.99495352 0.900929936 0.700192624 0.500858541 0.098831439 190.7962786 370949.223 0.032025082 0.031827688 1.78E-07 6.748583346 -0.200737312 GLSSAGGGS(ph)PHREDAQPEHSASAR ddPTM_A459_MK2206_30min_R2 3 GLSSAGGGSPHREDAQPEHSASAR 24 1 Q92994-9;Q92994-3;Q92994-7;Q92994-8;Q92994-5;Q92994 Q92994-9 BRF1 Transcription factor IIIB 90 kDa subunit 1 GLS(0.076)S(0.212)AGGGS(0.697)PHREDAQPEHS(0.013)AS(0.001)AR;GLS(0.207)S(0.207)AGGGS(0.586)PHREDAQPEHSASAR;GLS(0.153)S(0.153)AGGGS(0.694)PHREDAQPEHSASAR 66.845 0.0010478 38849700 23310.59 38610.7 30583.9 48714.91 38606.22 50754.2 43591.4 38157.7 44297.9 32926.6 TRUE FALSE 25095.26669 36693.34878 31603.55196 44734.74602 37090.34582 52685.68665 37867.79682 43145.0424 48150.85127 31852.20774 0.787865849 1.151987614 0.992193452 1.404447264 1.164451335 1.65406703 1.188859407 1.354538522 1.511695882 1 14.95910575 -4.787672723 0.787566138 1.349193211 0.532057378 0.40121892 0.192883349 2.472474739 1.177205867 0.070995084 1.783378452 1.63E-05 4.787672723 -0.817135833 GLSTS(ph)LPDLDSEPWIEVK ddPTM_A459_MK2206_30min_R2 2 GLSTSLPDLDSEPWIEVK 18 0 A0A3B3ISF0;Q659C4-2;Q659C4;H0Y9K3;D6R9W6;D6RJB0;Q659C4-9;Q659C4-4 A0A3B3ISF0 LARP1B La-related protein 1B 1 GLS(0.157)T(0.157)S(0.685)LPDLDSEPWIEVK;GLS(0.149)T(0.149)S(0.703)LPDLDSEPWIEVK 105.17 0.0017505 5839800 8108.6 11405.6 10855.9 15800.2 12458.8 12557.4 18225.4 15683.6 13595.3 12669 TRUE FALSE 8729.40065 10839.21449 11217.83029 14509.27312 11969.60491 13035.28066 15832.38309 17733.50037 14777.79462 12255.61157 0.712277849 0.88442869 0.915321951 1.183888135 0.976663208 1.063617314 1.291847657 1.446969845 1.205798221 1 13.58115486 -5.213790586 0.536576979 1.246752198 0.532434842 0.583292411 0.132715022 1.964089827 0.6000622 0.086992513 0.830149792 6.11E-06 5.213790586 -0.714317356 GLTLAPGLS(ph)PARPLFGSDFEK ddPTM_A459_MK2206_30min_R1 2 GLTLAPGLSPARPLFGSDFEK 21 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 GLTLAPGLS(1)PARPLFGSDFEK;GLT(0.004)LAPGLS(0.996)PARPLFGSDFEK 104.53 8.44E-05 74045000 8853.4 8198.4 7902.6 5760 7200.6 6236.8 8365.3 6968.8 7814.8 8408.1 TRUE FALSE 8100.371839 7664.68267 7366.19353 6203.636198 6913.784854 6589.922226 7807.2661 6907.872516 8627.176426 9449.758906 0.857204075 0.811098224 0.779511266 0.656486188 0.731636111 0.697364059 0.826186803 0.731010451 0.912952014 1 13.20606181 -8.435540947 3.26356364 0.998783534 0.759036417 0.655667189 0.058037191 0.142588835 2.92974249 0.059099547 0.015743615 3.67E-09 8.435540947 -0.239747117 GLTLAPGLS(ph)PARPLFGSDFEK ddPTM_A459_MK2206_30min_R2 2 GLTLAPGLSPARPLFGSDFEK 21 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 GLT(0.001)LAPGLS(0.999)PARPLFGSDFEK;GLTLAPGLS(1)PARPLFGSDFEK 71.492 0.0029431 131659000 79349 78215 72449 86434 67404 65958 94158 73356 61553 107528 TRUE FALSE 85424.02045 74330.95684 74864.4135 79372.06571 64757.38028 68468.07791 81794.9415 82943.88107 66906.76868 104019.3702 0.821231856 0.714587646 0.719716082 0.76305082 0.622551167 0.658224308 0.786343364 0.797388803 0.643214514 1 16.66649268 -10.89697067 3.587937648 1.001559663 0.724729055 0.621006654 0.064414991 95839409.27 154752800.2 1585028.749 0.016382059 1.27E-11 10.89697067 -0.276830608 GLTS(ph)VINQK ddPTM_A459_MK2206_30min_R1 2 GLTSVINQK 9 0 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 1 GLT(0.182)S(0.818)VINQK;GLT(0.013)S(0.987)VINQK 136.49 0.0026355 24562000 11107.5 12380.6 11703.6 10073.3 11619.5 11485.6 11676.4 9840.6 10139.5 9266.2 TRUE FALSE 10162.7488 11574.62069 10909.19224 10849.14731 11156.67071 12135.90475 10897.48866 9754.564672 11193.53731 10414.16681 0.975858077 1.111430314 1.047533849 1.041768152 1.071297485 1.165326518 1.046410035 0.936662995 1.074837528 1 13.3462598 -7.532717692 24.90441038 1.001757442 1.071808733 0.215311846 0.055312762 287.3331588 727288.1952 0.025278691 0.014617295 2.93E-08 7.532717692 0.070051291 GLTS(ph)VINQK ddPTM_A459_MK2206_30min_R2 4 GLTSVINQK 9 0 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 1 GLT(0.015)S(0.985)VINQK;GLT(0.001)S(0.999)VINQK;GLT(0.026)S(0.974)VINQK;GLT(0.002)S(0.998)VINQK 141.89 0.0021677 25549300 218325 222044 187745 260252 232240 194639 299876 232015 165837 224050 TRUE FALSE 235040.1299 211017.6178 194004.3246 238988.5791 223121.0907 202046.1235 260501.921 262340.1571 180261.2025 216739.2668 1.084437229 0.973601235 0.895104645 1.102654736 1.029444705 0.932208208 1.201913824 1.210395149 0.831696098 1 17.72560103 -7.23121488 24.84055538 1.078534313 1.002416268 0.048589088 0.11596876 1668.079668 1370943.449 0.044183 0.034219152 5.87E-08 7.23121488 -0.076118045 GLVAAYSGDS(ph)DNEEELVER ddPTM_A459_MK2206_30min_R1 4 GLVAAYSGDSDNEEELVER 19 0 P52756 P52756 RBM5 RNA-binding protein 5 1 GLVAAYS(0.009)GDS(0.991)DNEEELVER;GLVAAYS(0.063)GDS(0.937)DNEEELVER;GLVAAYS(0.006)GDS(0.994)DNEEELVER;GLVAAYSGDS(1)DNEEELVER 223.76 5.54E-52 18713300 4384.79 3836.93 4252.29 3637.44 4406.7 4050.59 4274.35 3684.93 3536.99 3429.94 TRUE FALSE 4011.840585 3587.14516 3963.656402 3917.596259 4231.171808 4279.930905 3989.21591 3652.713046 3904.672768 3854.866862 1.040720919 0.930549689 1.028221348 1.016272779 1.097618143 1.110266855 1.0348518 0.947558807 1.012920266 1 11.91246532 -4.400823365 22.77716022 1.021789397 12.45034764 0.012541778 0.053112139 8367.811383 1518361.271 0.014100859 138477.4477 3.97E-05 4.400823365 11.42855824 GLVAAYSGDS(ph)DNEEELVER ddPTM_A459_MK2206_30min_R2 4 GLVAAYSGDSDNEEELVER 19 0 P52756 P52756 RBM5 RNA-binding protein 5 1 GLVAAYS(0.006)GDS(0.994)DNEEELVER;GLVAAYSGDS(1)DNEEELVER;GLVAAY(0.007)S(0.003)GDS(0.99)DNEEELVER;GLVAAYS(0.147)GDS(0.853)DNEEELVER 216.16 2.96E-40 7734100 46378.2 56933 55656 69853 64975 71158 69126 57196 58103 62673 TRUE FALSE 49928.95065 54105.79001 57511.54326 64145.78645 62423.75503 73865.96755 60049.67316 64671.71358 63156.69391 60627.98514 0.82352977 0.892422697 0.948597304 1.058022732 1.029619488 1.218347721 0.990461303 1.066697391 1.041708606 1 15.88769626 -5.424193073 1.490606381 1.066407452 0.829827863 0.645468015 0.060450813 0.292120673 1.157644128 0.018412807 0.070725284 3.77E-06 5.424193073 -0.236579589 GLVAAYSGES(ph)DSEEEQER ddPTM_A459_MK2206_30min_R2 1 GLVAAYSGESDSEEEQER 18 0 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 GLVAAYS(0.001)GES(0.969)DS(0.03)EEEQER 183.74 5.87E-10 3282200 16076 21867 16789 25470 19005 20221 17457 13333 16911 16368 TRUE FALSE 17306.79092 20781.11658 17348.73688 23389.01953 18258.76821 20990.52432 15164.87493 15075.66888 18381.88821 15833.9135 1.093020429 1.312443483 1.09566955 1.477147107 1.153143107 1.32566875 0.957746481 0.952112621 1.160918822 1 13.95073025 -7.26501828 24.98182687 1.013703859 1.245894571 0.45160794 0.121489125 274.4077837 1915437.517 0.04693774 0.033051425 5.43E-08 7.26501828 0.232190711 GLVGEIIK ddPTM_A459_MK2206_30min_R2 1 GLVGEIIK 8 0 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;E5RHP0;F6XY72;C9K028;P15531;P15531-2 Q32Q12;P15531 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 138.9 0.033783 2990500 25796 26303 23467 26245 24046 26689 29836 23781 22723 25219 FALSE TRUE 27770.96159 24996.83127 24249.37807 24100.69955 23101.83322 27704.6686 25918.49736 26889.25835 24699.40547 24396.1061 1.138335826 1.024623814 0.993985596 0.987891242 0.946947563 1.135618467 1.062403043 1.10219468 1.012432286 1 14.57436327 -6.762745769 24.99995999 1.068908934 1.015658496 0.118114703 0.05884771 68.34905636 1307939.663 0.020409911 0.019002784 1.73E-07 6.762745769 -0.053250438 GLVGEIIKR ddPTM_A459_MK2206_30min_R1 2 GLVGEIIKR 9 1 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;E5RHP0;F6XY72;C9K028;P15531;P15531-2 Q32Q12;P15531 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ; 112.41 0.013137 23718000 10727.9 10597.9 11845.7 9624.1 11797.1 10481.6 11921.3 12048.4 7857.3 7843 FALSE TRUE 9815.435771 9907.974784 11041.64689 10365.34985 11327.19653 11075.05913 11126.05183 11943.06211 8674.094453 8814.650052 1.113536637 1.124034956 1.252647221 1.175923013 1.285042113 1.256437756 1.26222275 1.354910523 0.984054319 1 13.10568758 -8.280919934 24.85254555 0.992027052 1.227685756 0.646757928 0.069784298 569.8772679 727020.0784 0.07116578 0.018490939 5.24E-09 8.280919934 0.235658704 GLVGEIIKR ddPTM_A459_MK2206_30min_R2 1 GLVGEIIKR 9 1 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;E5RHP0;F6XY72;C9K028;P15531;P15531-2 Q32Q12;P15531 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 112.41 0.013137 4050100 24311 39988 32260 34912 38112 40251 34193 24399 35667 32166 FALSE TRUE 26172.26885 38002.25407 33335.5323 32059.57792 36615.53138 41782.78001 29703.41803 27588.03307 38769.25119 31116.42605 0.841107806 1.221292381 1.071316232 1.030310418 1.176726765 1.34278853 0.954589643 0.88660674 1.245941649 1 14.92538875 -11.44517089 6.563062148 0.972772123 1.088107976 0.026714245 0.154410662 0.06847265 0.000810728 0.166410551 0.035994289 3.59E-12 11.44517089 0.115335853 GLVGPELHDR ddPTM_A459_MK2206_30min_R1 2 GLVGPELHDR 10 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 132.78 0.0033474 7826800 5378.4 4839 5146.8 4555.7 5101.3 5176 4915.1 5026.8 4491 4395.1 FALSE TRUE 4920.938837 4523.98022 4797.449556 4906.580803 4898.104419 5469.060647 4587.222647 4982.851218 4957.855521 4939.598169 0.9962225 0.915859968 0.971222636 0.993315779 0.991599772 1.107187358 0.92866312 1.00875639 1.003696121 1 12.27017797 -5.784000832 2.49181044 1.007263555 0.954033566 0.175262845 0.044498239 0.460588441 5.832439765 0.013086929 0.023506368 1.64E-06 5.784000832 -0.053229989 GLVLDHGAR ddPTM_A459_MK2206_30min_R1 2 GLVLDHGAR 9 0 P40227;P40227-2 P40227 CCT6A T-complex protein 1 subunit zeta 0 ; 154.12 0.0013042 10520600 12755.2 13255.1 14871.5 11688.3 14718 13307 15535.3 14483 13649.5 13053.8 FALSE TRUE 11670.30326 12392.19058 13862.06401 12588.53489 14131.75089 14060.43084 14498.96848 14356.37666 15068.41437 14671.0033 0.795467292 0.844672333 0.944861352 0.858055488 0.963243659 0.958382365 0.988273821 0.978554525 1.0270882 1 13.84067991 -2.475824295 0.27713246 1.018679712 1.25E-11 0.836604682 0.029267323 11.38605152 0.256299852 0.032779342 5.038765209 0.003343303 2.475824295 -1.018679712 GLVLDHGAR ddPTM_A459_MK2206_30min_R2 2 GLVLDHGAR 9 0 P40227;P40227-2 P40227 CCT6A T-complex protein 1 subunit zeta 0 ; 154.12 0.0013042 12131100 53966 64008 69491 63671 64811 69732 58875 47961 74609 69798 FALSE TRUE 58097.67845 60829.4558 71807.79526 58468.87563 62266.19449 72385.70012 51144.64178 54229.66737 81098.35596 67520.49698 0.860445066 0.900903556 1.063496249 0.865942614 0.922182112 1.072055203 0.757468385 0.803158593 1.201092403 1 16.0430379 -8.262707572 24.99842817 1.100546198 0.910633449 0.356270231 0.104593349 131.8821634 2599485.959 0.084975142 0.026645629 5.46E-09 8.262707572 -0.189912749 GLVLGPIHK ddPTM_A459_MK2206_30min_R2 1 GLVLGPIHK 9 0 F5GZS6;J3KPF3;P08195-2;P08195-3;P08195;P08195-4;F5H0E2;H0YFS2 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 107.66 0.017503 2146200 29468 18997 20019 22615 21652 26206 35902 19973 26643 26596 FALSE TRUE 31724.09274 18053.6366 20686.42347 20767.28216 20801.83369 27203.28769 31188.02427 22583.53968 28960.35998 25728.1747 1.233048714 0.701706857 0.804037741 0.807180548 0.808523493 1.057334537 1.212212862 0.877774655 1.125628239 1 14.65106149 -6.769406333 24.73630875 1.056802452 0.854245399 0.258636939 0.154192579 203.0039987 630295.5983 0.052461618 0.04709719 1.70E-07 6.769406333 -0.202557053 GLVSDGTS(ph)PGER ddPTM_A459_MK2206_30min_R2 1 GLVSDGTSPGER 12 0 Q9NRF2-2;Q9NRF2-3;Q9NRF2 Q9NRF2-2 SH2B1 SH2B adapter protein 1 1 GLVS(0.004)DGT(0.257)S(0.738)PGER 80.318 0.040369 2260800 27008 31403 24030 27772 25820 32318 31172 23492 25175 32294 TRUE FALSE 29075.75325 29843.57268 24831.14821 25502.93876 24806.17706 33547.88414 27079.07896 26562.48506 27364.67599 31240.24942 0.930714504 0.955292395 0.794844749 0.816348756 0.794045423 1.073867359 0.866800984 0.85026482 0.875942942 1 14.93111835 GLVVDMDGFEEER ddPTM_A459_MK2206_30min_R2 1 GLVVDMDGFEEER 13 0 P49588;P49588-2 P49588 AARS "Alanine--tRNA ligase, cytoplasmic" 0 161.67 2.15E-05 0 12229 12902 12103 10782 15868 14485 11883 11846 10193 13909 FALSE TRUE 13165.26164 12261.30544 12506.50798 9901.07611 15244.94259 15036.23683 10322.74783 13394.31287 11079.56872 13455.15047 0.978455178 0.911272265 0.929495958 0.735857702 1.133019109 1.117507891 0.767196759 0.99547849 0.82344443 1 13.7158709 -4.73765403 22.26693491 0.934949191 0.978455867 0.01051954 0.126986898 3909.041945 3658728.528 0.031752535 1.448066861 1.83E-05 4.73765403 0.043506676 GLWSTDS(ph)AEEDKETK ddPTM_A459_MK2206_30min_R1 4 GLWSTDSAEEDKETK 15 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GLWST(0.002)DS(0.998)AEEDKETK;GLWSTDS(0.999)AEEDKETK;GLWS(0.003)T(0.069)DS(0.927)AEEDKETK;GLWST(0.003)DS(0.997)AEEDKETK 263.98 4.29E-36 34340600 6890.4 8902.7 9126.4 8804.9 5283.68 4377.7 5534.4 6267.1 8172.7 6966.8 TRUE FALSE 6304.335297 8323.132612 8506.925396 9483.054924 5073.219837 4625.561591 5165.210274 6212.307405 9022.281411 7829.899781 0.805161685 1.062993505 1.086466703 1.211133627 0.64792909 0.590756168 0.659677699 0.793408291 1.152285682 1 12.93477813 -6.265898655 24.95148981 0.778800649 1.046194769 0.269780849 0.185072371 470.3228921 2631646.879 0.059367739 0.06964894 5.42E-07 6.265898655 0.26739412 GLWSTDS(ph)AEEDKETK ddPTM_A459_MK2206_30min_R2 4 GLWSTDSAEEDKETK 15 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GLWS(0.016)T(0.211)DS(0.772)AEEDKETK;GLWS(0.057)T(0.251)DS(0.692)AEEDKETK;GLWS(0.13)T(0.19)DS(0.679)AEEDKET(0.001)K;GLWST(0.029)DS(0.97)AEEDKETK 109.07 0.018211 67779600 241350 217221 238953 159809 149902 108236 251740 193231 132464 229686 TRUE FALSE 259827.9416 206434.121 246919.5738 146752.0935 144016.0943 112354.9968 218686.2356 218486.9552 143985.4793 222191.3646 1.169388117 0.929082556 1.111292395 0.660476134 0.648162428 0.505667702 0.984224729 0.983327842 0.648024641 1 17.76144322 -5.755211578 24.99538688 0.767126375 1.055837231 0.385335581 0.169768482 166.2125448 667088.3724 0.048538304 0.081453183 1.76E-06 5.755211578 0.288710856 GLYDGPVCEVSVT(ph)PK ddPTM_A459_MK2206_30min_R1 5 GLYDGPVCEVSVTPK 15 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 GLYDGPVCEVS(0.004)VT(0.996)PK;GLYDGPVCEVS(0.231)VT(0.769)PK;GLYDGPVCEVS(0.438)VT(0.562)PK;GLYDGPVCEVS(0.143)VT(0.857)PK;GLYDGPVCEVS(0.083)VT(0.917)PK 238.12 1.33E-19 1119727400 34138 40507.9 40919.2 35077.8 26321.8 20572.5 25123.5 23338.1 25640.5 24720.7 TRUE FALSE 31234.38383 37870.82835 38141.71871 37779.49823 25273.34697 21737.29717 23447.55716 23134.05745 28305.92173 27783.28695 1.124214852 1.363079481 1.3728296 1.359792249 0.909660078 0.782387527 0.843944678 0.832660927 1.018811121 1 14.76192967 -6.281054913 8.154099273 0.880520671 1.31412025 0.81221095 0.095635451 0.087476385 31.24716793 0.029569291 0.034381724 5.24E-07 6.281054913 0.433599579 GLYDGPVCEVSVT(ph)PK ddPTM_A459_MK2206_30min_R2 6 GLYDGPVCEVSVTPK 15 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 GLYDGPVCEVS(0.053)VT(0.947)PK;GLYDGPVCEVS(0.211)VT(0.789)PK;GLYDGPVCEVS(0.013)VT(0.987)PK;GLYDGPVCEVS(0.019)VT(0.981)PK;GLYDGPVCEVS(0.005)VT(0.995)PK;GLYDGPVCEVS(0.452)VT(0.548)PK 205.95 5.04E-06 861827800 2442776.6 2420416 2665417.6 2157216 2330734 1555052.1 2419613 1667025.7 1549008.8 2180710.9 TRUE FALSE 2629797.455 2300221.661 2754281.292 1980964.552 2239217.672 1614230.697 2101914.907 1884911.683 1683738.785 2109554.482 1.246612722 1.090382676 1.305622261 0.939044035 1.061464727 0.765199814 0.996378584 0.893511734 0.798148993 1 21.00850692 -5.809859388 8.901517789 0.919372917 1.201555582 0.647572528 0.098658516 0.180042972 30.81288847 0.027043881 0.040355469 1.55E-06 5.809859388 0.282182666 GMDDDRGPR ddPTM_A459_MK2206_30min_R1 1 GMDDDRGPR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 104.06 0.041389 2747100 2998.7 3281.2 2694.5 2650.7 2795.6 2509.5 3454.3 2941.9 1012.4 2930 FALSE TRUE 2743.644818 3067.593284 2511.604847 2854.857373 2684.245332 2651.585721 3223.86995 2916.179278 1117.642603 3292.99052 0.83317726 0.931552419 0.762712444 0.86694977 0.815139101 0.805221183 0.979009788 0.88557172 0.339400492 1 11.68518264 GMDGSTNETAS(ph)SR ddPTM_A459_MK2206_30min_R2 2 GMDGSTNETASSR 13 0 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 GMDGSTNET(0.001)AS(0.951)S(0.048)R;GMDGST(0.001)NET(0.002)AS(0.966)S(0.031)R 101.75 0.022736 6881100 22203.2 19828.7 16292 22863 20872 21185.4 21075.5 15212.7 17553.8 21510 TRUE FALSE 23903.09406 18844.03559 16835.16715 20995.01976 20052.46041 21991.62524 18308.26153 17201.05212 19080.59779 20808.13046 1.148738187 0.905609258 0.809066782 1.008981552 0.963683904 1.056876555 0.879860955 0.826650532 0.916977997 1 14.34485973 -7.31884719 24.99721933 0.891426509 0.971191605 0.123963893 0.093651179 588.3983657 256205.1582 0.03986865 0.026879446 4.80E-08 7.31884719 0.079765096 GMEFIAPVS(ph)APT(ph)K ddPTM_A459_MK2206_30min_R1 1 GMEFIAPVSAPTK 13 0 Q8WU49 Q8WU49 C7orf33 Uncharacterized protein C7orf33 2 GMEFIAPVS(1)APT(1)K 90.15 0.037277 0 2040.7 2027.9 2273.2 2218.2 1616.3 1632.2 2102.9 2330.3 974.45 1692.3 TRUE FALSE 1867.127749 1895.883341 2118.901517 2389.046148 1551.919348 1724.613753 1962.619378 2309.926433 1075.747565 1901.9549 0.981688761 0.996807727 1.114065069 1.256100315 0.81596012 0.90675849 1.031895855 1.21450116 0.565600985 1 10.89326732 -6.274392831 24.97680385 0.937865277 1.082632756 0.178727013 0.170960149 1569.387532 3026080.036 0.053015819 0.060466859 5.32E-07 6.274392831 0.144767479 GMGPGT(ph)PAGYGR ddPTM_A459_MK2206_30min_R2 4 GMGPGTPAGYGR 12 0 P23246 P23246 SFPQ "Splicing factor, proline- and glutamine-rich" 1 GMGPGT(1)PAGYGR;GMGPGT(1)PAGYGR;GMGPGT(1)PAGYGR;GMGPGT(1)PAGYGR 148.13 0.0014292 252219000 136817 163306 142106 194887 150610 156677 165125 121853 122945 161456 TRUE FALSE 147291.8147 155196.4615 146843.7431 178964.1087 144696.2946 162639.453 143443.8891 137779.6055 133638.5339 156187.7039 0.943043601 0.993653518 0.940174799 1.145827131 0.926425647 1.041307663 0.918407055 0.88214118 0.855627751 1 17.25292135 -7.391114346 5.712959211 0.901548638 0.998729156 0.260087588 0.06889583 0.287752663 12.15406422 0.028387849 0.018875705 4.06E-08 7.391114346 0.097180517 GMKDDKEEEEDGTGS(ph)PQLNNR ddPTM_A459_MK2206_30min_R2 1 GMKDDKEEEEDGTGSPQLNNR 21 2 P49407-2;P49407 P49407-2 ARRB1 Beta-arrestin-1 1 GMKDDKEEEEDGT(0.211)GS(0.789)PQLNNR 44.474 0.040118 19140000 70683 75245 65608 78437 70288 51505 64605 81168 44142 94831 TRUE FALSE 76094.54483 71508.44272 67795.33797 72028.44619 67528.13995 53465.05887 56122.2859 91776.93629 47981.39137 91736.67224 0.829488829 0.779496803 0.739021117 0.785165239 0.736108454 0.582810097 0.611775907 1.000438909 0.523033921 1 16.48521095 -11.16750026 5.933514552 1.002061925 0.73520101 0.278643643 0.129300779 0.003427893 0.000205308 0.121681935 0.029307447 6.80E-12 11.16750026 -0.266860915 GMLTSSGGQS(ph)PSR ddPTM_A459_MK2206_30min_R2 1 GMLTSSGGQSPSR 13 0 O43365 O43365 HOXA3 Homeobox protein Hox-A3 1 GMLTSSGGQS(0.744)PS(0.256)R 116.51 0.0037962 3568200 13973 16039 12921 21184 13061 11972 19401 13594 14519 11203 TRUE FALSE 15042.78362 15242.52658 13351.77969 19453.19944 12548.15951 12427.60285 16853.6254 15370.78248 15781.83638 10837.44703 1.388037569 1.406468382 1.232004148 1.794998341 1.157851981 1.146727898 1.555128745 1.418302893 1.456231928 1 13.40373732 GMSNNT(ph)PQLNR ddPTM_A459_MK2206_30min_R1 1 GMSNNTPQLNR 11 0 F8VVY1;F8VX63;F8VP97;Q9NZN8-4;Q9NZN8-5;Q9NZN8;F8VQD8;A0A087X050;F8VUB4;F8VV52;F8W145;F8VWH8 F8VVY1 CNOT2 CCR4-NOT transcription complex subunit 2 1 GMS(0.196)NNT(0.804)PQLNR 96.82 0.036126 0 1011 1217.7 850.09 798.28 1334.7 1237.3 1135.2 814.75 843.22 874.69 TRUE FALSE 925.009141 1138.427509 792.3882593 859.7636639 1281.536073 1307.354857 1059.472879 807.6267266 930.8757365 983.0532008 0.940955322 1.158052797 0.806048196 0.874585082 1.303628402 1.329892274 1.077737073 0.821549359 0.946923051 1 9.941125684 -7.739162041 24.04125503 0.913177186 1.074804083 0.142466356 0.164825676 294.322279 317627.2114 0.085870871 0.049518313 1.82E-08 7.739162041 0.161626897 GMSNNT(ph)PQLNR ddPTM_A459_MK2206_30min_R2 1 GMSNNTPQLNR 11 0 F8VVY1;F8VX63;F8VP97;Q9NZN8-4;Q9NZN8-5;Q9NZN8;F8VQD8;A0A087X050;F8VUB4;F8VV52;F8W145;F8VWH8 F8VVY1 CNOT2 CCR4-NOT transcription complex subunit 2 1 GMS(0.012)NNT(0.988)PQLNR 116.98 0.0087835 0 25503 25747 25271 27345 26125 28664 26570 21501 21285 21911 TRUE FALSE 27455.52929 24468.44142 26113.52253 25110.82603 25099.20123 29754.82861 23081.32708 24311.25452 23136.33083 21196.04586 1.295313733 1.154387077 1.231999718 1.18469389 1.184145448 1.403791481 1.088944949 1.146971217 1.091539949 1 14.37150753 -8.123446912 1.104506136 1.012989431 1.22819648 0.489726283 0.077053158 0.421169816 0.977620319 0.07091849 0.02437172 7.53E-09 8.123446912 0.215207049 GMYDGPVFDLTT(ph)TPK ddPTM_A459_MK2206_30min_R1 2 GMYDGPVFDLTTTPK 15 0 Q14195-2;Q14195;H0YBT4 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GMYDGPVFDLT(0.002)T(0.576)T(0.422)PK;GMYDGPVFDLTT(0.832)T(0.168)PK 125.47 0.0096318 142763000 22225.1 26017.6 27322.5 22255.9 18136.9 13586.1 17067.7 16048.1 17831.7 16056.2 TRUE FALSE 20334.73854 24323.84951 25467.92482 23970.05327 17414.46887 14355.33324 15929.14487 15907.79315 19685.36903 18045.36327 1.126867785 1.347927949 1.411327909 1.328322013 0.96503842 0.795513674 0.882727858 0.881544633 1.090882391 1 14.13934057 -6.294632779 5.118409967 0.917269733 1.315648549 0.761351108 0.100627507 0.090524593 6.442005439 0.032104782 0.037595008 5.07E-07 6.294632779 0.398378816 GMYDGPVFDLTT(ph)TPK ddPTM_A459_MK2206_30min_R2 3 GMYDGPVFDLTTTPK 15 0 Q14195-2;Q14195;H0YBT4 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GMYDGPVFDLTT(0.628)T(0.372)PK;GMYDGPVFDLTT(0.61)T(0.389)PK;GMYDGPVFDLT(0.005)T(0.931)T(0.064)PK 186.16 5.18E-05 84267000 303351 314837 352202 297673 305619 200338 309000 222150 181890 259990 TRUE FALSE 326575.7858 299202.6524 363944.2389 273352.1637 293618.8624 207962.003 268427.9288 251185.7678 197710.4634 251506.5476 1.298478266 1.189641603 1.447056716 1.086859035 1.167440233 0.826865165 1.067280082 0.998724567 0.786104637 1 17.94023643 -6.31844359 1.599726091 0.945721228 1.291435565 0.635222847 0.115439757 0.241874493 1.232131893 0.0412452 0.053298349 4.80E-07 6.31844359 0.345714337 GMYDGPVFDLTTT(ph)PK ddPTM_A459_MK2206_30min_R2 1 GMYDGPVFDLTTTPK 15 0 Q14195-2;Q14195;H0YBT4 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GMYDGPVFDLTT(0.225)T(0.775)PK 206.46 4.77E-06 16492000 82682 79883 82321 79565 80933 54467 81096 58762 48835 65788 TRUE FALSE 89012.19749 75916.12638 85065.54105 73064.28498 77755.16376 56539.77985 70447.99779 66442.39516 53082.58003 63641.34295 1.398653664 1.192874362 1.336639629 1.148063218 1.22177126 0.88841274 1.10695335 1.044013091 0.834089565 1 15.95767666 -6.341616771 0.754511383 0.96085254 1.334080645 0.669079057 0.099084034 0.435113896 0.541877156 0.057384667 0.0913102 4.55E-07 6.341616771 0.373228105 GNAEGS(ph)SDEEGKLVIDEPAK ddPTM_A459_MK2206_30min_R1 2 GNAEGSSDEEGKLVIDEPAK 20 1 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.5)S(0.5)DEEGKLVIDEPAK;GNAEGS(0.89)S(0.11)DEEGKLVIDEPAK 102.92 0.00033678 125945000 7360 9165 9239.3 6243 5271.5 5313.6 7220.5 6088.3 11514.8 12803.5 TRUE FALSE 6733.993351 8568.356834 8612.162058 6723.836942 5061.524992 5614.45144 6738.83362 6035.070635 12711.80467 14389.69424 0.467973345 0.595450931 0.598495139 0.467267534 0.351746528 0.390171698 0.468309716 0.419402284 0.88339644 1 13.81274832 -8.351658016 4.073446633 0.98893729 0.471329549 0.861457772 0.076117243 0.086816312 2.454272472 0.083085165 0.022102635 4.45E-09 8.351658016 -0.517607742 down GNAEGS(ph)SDEEGKLVIDEPAK ddPTM_A459_MK2206_30min_R2 3 GNAEGSSDEEGKLVIDEPAK 20 1 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.5)S(0.5)DEEGKLVIDEPAK;GNAEGS(0.663)S(0.337)DEEGKLVIDEPAK;GNAEGS(0.776)S(0.224)DEEGKLVIDEPAK 87.24 0.0011848 189199000 285861 203963 230832 192570 176392 116172 258162 213226 133514 265332 TRUE FALSE 307746.7379 193834.494 238527.8237 176836.415 169465.9638 120593.0069 224265.0193 241095.3703 145126.8064 256674.2386 1.198977894 0.755177049 0.929301768 0.688952721 0.660237524 0.469829024 0.873734039 0.939304901 0.565412436 1 17.96957898 -2.431088836 1.265498503 0.744251371 199.8633126 0.372756279 0.16575221 697.7304841 3.381237883 0.048427659 400839.6447 0.003706049 2.431088836 199.1190613 GNAEGS(ph)SDEEGKLVIDEPAKEK ddPTM_A459_MK2206_30min_R1 2 GNAEGSSDEEGKLVIDEPAKEK 22 2 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.915)S(0.085)DEEGKLVIDEPAKEK;GNAEGS(0.763)S(0.237)DEEGKLVIDEPAKEK 82.627 0.0010063 61446000 5839.6 7603.9 8464 7018 4652 4146.5 4927 5737 6175.2 5275.1 TRUE FALSE 5342.911355 7108.884728 7889.487262 7558.527576 4466.700989 4381.271247 4598.32882 5686.842014 6817.134138 5928.619213 0.9012067 1.199079326 1.330746162 1.274922086 0.753413371 0.739003651 0.775615477 0.959218632 1.149868779 1 12.53348042 -6.256792438 24.98741701 0.880259873 1.1891206 0.426485485 0.158325069 384.6180583 2068157.355 0.050895336 0.063523682 5.54E-07 6.256792438 0.308860727 GNAEGS(ph)SDEEGKLVIDEPAKEK ddPTM_A459_MK2206_30min_R2 4 GNAEGSSDEEGKLVIDEPAKEK 22 2 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.724)S(0.276)DEEGKLVIDEPAKEK;GNAEGS(0.766)S(0.234)DEEGKLVIDEPAKEK;GNAEGS(0.873)S(0.127)DEEGKLVIDEPAKEK;GNAEGS(0.5)S(0.5)DEEGKLVIDEPAKEK 81.763 0.0011334 129583000 127317.4 179561.4 177646 164996.1 180358 97872.4 197591 147795.9 121805.6 206774 TRUE FALSE 137064.918 170644.642 183568.629 151515.3908 173276.2387 101597.0028 171647.0644 167113.3316 132400.0309 200026.9813 0.685232148 0.85310812 0.917719339 0.757474766 0.866264329 0.507916493 0.858119556 0.83545395 0.661910858 1 17.60983509 -10.72034352 3.446036942 1.00037927 0.777225154 0.252817805 0.117488998 40560009.6 63156065.02 167551.8272 0.02990836 1.90E-11 10.72034352 -0.223154117 GNAEGSS(ph)DEEGKLVIDEPAK ddPTM_A459_MK2206_30min_R1 2 GNAEGSSDEEGKLVIDEPAK 20 1 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.357)S(0.643)DEEGKLVIDEPAK;GNAEGS(0.17)S(0.83)DEEGKLVIDEPAK 95.209 0.00058765 98582000 6444 7695.7 7837.7 5569.3 4089.2 4819.2 6340.7 4967.3 9288.5 10575.2 TRUE FALSE 5895.903961 7194.708531 7305.698761 5998.248451 3926.318505 5092.058939 5917.723472 4923.87142 10254.07281 11885.33561 0.496065416 0.605343321 0.614681739 0.504676405 0.330349822 0.42843207 0.497901251 0.414281227 0.862749959 1 13.53689502 -8.388288689 3.947635465 0.992485975 0.488874866 0.828924567 0.081703428 0.094972614 2.38903213 0.088416585 0.02334976 4.09E-09 8.388288689 -0.503611109 down GNAEGSS(ph)DEEGKLVIDEPAK ddPTM_A459_MK2206_30min_R2 3 GNAEGSSDEEGKLVIDEPAK 20 1 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.04)S(0.96)DEEGKLVIDEPAK;GNAEGS(0.203)S(0.797)DEEGKLVIDEPAK;GNAEGS(0.222)S(0.778)DEEGKLVIDEPAK 92.39 0.00077349 193364000 152187 109203 120865 106735 103916 66681 145241 117482 82848 152106 TRUE FALSE 163838.5537 103780.1378 124894.5788 98014.40907 99835.7357 69218.59218 126170.6822 132837.3008 90053.96929 147142.7937 1.113466379 0.705302212 0.848798474 0.666117631 0.678495584 0.47041782 0.857471026 0.902778162 0.612017531 1 17.16685736 -4.758299172 24.96602445 0.739008548 1.113466903 0.350916502 0.148122569 96.32246171 765673.4341 0.036423665 0.25203367 1.74E-05 4.758299172 0.374458355 GNAEGSS(ph)DEEGKLVIDEPAKEK ddPTM_A459_MK2206_30min_R2 2 GNAEGSSDEEGKLVIDEPAKEK 22 2 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.258)S(0.742)DEEGKLVIDEPAKEK;GNAEGS(0.455)S(0.545)DEEGKLVIDEPAKEK 84.946 0.00073257 51482000 122006 159282 149756 137036 161464 89043 167627 121690 101861 142703 TRUE FALSE 131346.8732 151372.2875 154748.7903 125839.7204 155124.1121 92431.59376 145617.3735 137595.3008 110720.6857 138046.6128 0.951467555 1.096530255 1.120989405 0.911574126 1.123708209 0.669567995 1.054842061 0.996730728 0.802052897 1 17.07479596 GNDPLTS(ph)SPGR ddPTM_A459_MK2206_30min_R2 1 GNDPLTSSPGR 11 0 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 GNDPLT(0.021)S(0.489)S(0.489)PGR 94.538 0.022115 21344000 75367 89366 78415 83225 94336 91351 87281 67804 73539 75921 TRUE FALSE 81137.15547 84928.21439 81029.31696 76425.25128 90631.89464 94827.42632 75820.89986 76666.21561 79935.28929 73443.70399 1.104753043 1.156371612 1.103284728 1.040596363 1.234032187 1.291158005 1.032367592 1.043877303 1.088388588 1 16.1643512 GNDPLTSS(ph)PGR ddPTM_A459_MK2206_30min_R1 4 GNDPLTSSPGR 11 0 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 GNDPLTS(0.002)S(0.998)PGR;GNDPLTS(0.005)S(0.995)PGR;GNDPLTS(0.011)S(0.989)PGR;GNDPLTS(0.003)S(0.997)PGR 163.71 0.00064187 2111040000 37381.3 38572.2 37179.5 30408.5 39695.5 34944 39337.9 33963.5 29945.9 30565.2 TRUE FALSE 34201.82414 36061.14277 34655.85913 32750.56794 38114.34418 36922.49908 36713.74047 33666.5607 33058.88347 34351.84773 0.995632736 1.04975846 1.008849929 0.95338592 1.109528212 1.074832986 1.068755915 0.980050941 0.962361144 1 15.06810008 -7.784735826 23.22238457 0.978404372 1.037637986 0.26951094 0.042526435 151.8630559 151375.4755 0.024759671 0.011911422 1.64E-08 7.784735826 0.059233614 GNDPLTSS(ph)PGR ddPTM_A459_MK2206_30min_R2 5 GNDPLTSSPGR 11 0 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 GNDPLTS(0.005)S(0.995)PGR;GNDPLTS(0.003)S(0.997)PGR;GNDPLT(0.008)S(0.047)S(0.945)PGR;GNDPLTS(0.004)S(0.996)PGR;GNDPLT(0.003)S(0.019)S(0.979)PGR 148.13 0.00065431 2285771000 802180 927950 835570 983070 946700 961050 983330 753899 822710 906120 TRUE FALSE 863595.5176 881869.3524 863427.4868 902750.0363 909527.8012 997623.4312 854217.5898 852436.1878 894267.8287 876553.3786 0.98521726 1.006064632 0.985025565 1.029885981 1.037618271 1.13812057 0.974518621 0.972486341 1.020209209 1 19.74148242 -2.05263632 19.66945047 1.016421093 0.19071196 0 0.046344452 0 0 0.01121014 0 0.008858571 2.05263632 -0.825709132 GNDS(ph)DGEGESDDPEK ddPTM_A459_MK2206_30min_R2 1 GNDSDGEGESDDPEK 15 0 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 GNDS(0.907)DGEGES(0.093)DDPEK 172.56 3.83E-05 10963000 39628 23361 28208 24405 22758 19815 34139 26145 16986 30246 TRUE FALSE 42661.95015 22200.92671 29148.44064 22411.03343 21864.40657 20569.07371 29656.50829 29562.24127 18463.41158 29259.0755 1.458075808 0.758770615 0.996218785 0.765951523 0.747269222 0.702998074 1.013583231 1.010361427 0.631031954 1 14.83659656 -4.756364795 24.99966323 0.847341758 1.458076751 0.636399225 0.138488049 101.7464092 501191.8066 0.03415213 0.277980732 1.75E-05 4.756364795 0.610734993 GNDT(ph)PLALESTNTEK ddPTM_A459_MK2206_30min_R1 1 GNDTPLALESTNTEK 15 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GNDT(0.999)PLALESTNTEK 167.93 0.00016259 9809500 2091.6 2356.2 2091.1 1229.2 1685 2076.3 2569.9 1613.3 1985.3 2028.2 TRUE FALSE 1913.698437 2202.810952 1949.161958 1323.873197 1617.882882 2193.858312 2398.46666 1599.195088 2191.679039 2279.468728 0.839537043 0.966370332 0.855094845 0.580781469 0.70976314 0.96244282 1.05220424 0.701564829 0.961486776 1 11.1544819 -6.773501385 24.94380193 0.924179079 0.792049279 0.242583471 0.127504952 398.2380113 823537.1883 0.048654042 0.043230189 1.68E-07 6.773501385 -0.132129801 GNDT(ph)PLALESTNTEK ddPTM_A459_MK2206_30min_R2 2 GNDTPLALESTNTEK 15 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GNDT(1)PLALESTNTEK;GNDT(0.798)PLALES(0.115)T(0.087)NTEK 206.63 4.69E-06 23998000 70907 69506 69712 71278 77738 61138 85769 62460 50997 76135 TRUE FALSE 76335.69444 66054.43311 72036.16329 65454.35939 74685.61552 63464.64943 74507.42727 70623.73646 55432.62688 73650.72119 1.036455492 0.896860642 0.978078179 0.888713082 1.014051381 0.861697597 1.011632012 0.958900813 0.752642011 1 16.16841203 GNDTPLALES(ph)TNTEK ddPTM_A459_MK2206_30min_R1 1 GNDTPLALESTNTEK 15 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GNDT(0.135)PLALES(0.66)T(0.199)NT(0.006)EK 149.6 0.00028199 6411900 3292.6 3629.4 3571.1 2566.8 3013.6 2840.8 3385.7 3160.7 3720 3790.4 TRUE FALSE 3012.54708 3393.1254 3328.703682 2764.495381 2893.561931 3001.643641 3159.846131 3133.066333 4106.707312 4259.983368 0.707173437 0.79651142 0.781388891 0.648945111 0.679242542 0.704613934 0.741750814 0.735464452 0.964019565 1 12.05663208 -8.285056377 3.776563701 0.998080326 0.723084749 0.861178031 0.041511608 0.083528205 2.505910273 0.041678552 0.011812781 5.19E-09 8.285056377 -0.274995577 GNDVAFHFNPR ddPTM_A459_MK2206_30min_R2 3 GNDVAFHFNPR 11 0 P17931;G3V3R6 P17931 LGALS3 Galectin-3;Galectin 0 ;; 127.87 0.0040539 9925700 97450 123185 105590 119209 117970 131659 110724 91825 119799 106669 FALSE TRUE 104910.8469 117067.812 109110.3179 109469.2434 113337.905 136669.3755 96185.8058 103826.8428 130218.9005 103188.3993 1.016692261 1.134505554 1.057389384 1.060867735 1.098358981 1.324464537 0.932137784 1.006187164 1.261952907 1 16.65492126 -2.688278099 18.73862721 1.091439868 0.446197729 0 0.115743442 0 0 0.025815408 0 0.002049849 2.688278099 -0.645242138 GNFNYIEFTR ddPTM_A459_MK2206_30min_R2 1 GNFNYIEFTR 10 0 J3QRS3;P19105;O14950 J3QRS3 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B 0 164.66 0.0051483 9478900 24107 24761 26764 29757 26676 31118 29154 22530 22102 28316 FALSE TRUE 25952.65046 23531.40475 27656.2984 27325.75791 25628.5662 32302.2173 25326.04478 25474.74836 24024.39201 27392.05124 0.94745188 0.859059606 1.009646856 0.997579833 0.935620556 1.179255143 0.924576424 0.930005137 0.877057063 1 14.74146969 -1.586431341 20.57106193 0.967124927 0.010431383 0 0.08554166 0 0 0.019983678 0 0.025916041 1.586431341 -0.956693544 GNGSGGS(ph)RENSTVDFSK ddPTM_A459_MK2206_30min_R2 2 GNGSGGSRENSTVDFSK 17 1 Q9Y6M7-6;Q9Y6M7-13;Q9Y6M7-11;C9JRP1;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7-7;Q9Y6M7-14;Q9Y6M7-3;Q9Y6M7;Q9Y6M7-4;Q9Y6M7-8;E9PFN4;A0A0A0MST8;Q9Y6M7-10;Q9Y6M7-12 Q9Y6M7-6 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 GNGS(0.021)GGS(0.979)RENSTVDFSK;GNGS(0.052)GGS(0.947)RENSTVDFSK 138.05 0.0024206 16798700 42591 33791 35975 38391 42910 38445 61028 29713 58995 44919 TRUE FALSE 45851.79971 32112.98808 37174.38854 35254.33249 41225.13779 39908.05141 53014.95029 33596.59112 64126.27846 43453.29671 1.055197262 0.739023055 0.855502145 0.811315485 0.948722903 0.918412513 1.220044377 0.773165529 1.475751745 1 15.40717801 -7.034093914 1.262748786 1.114815478 0.856015163 0.260638369 0.184223323 0.614673227 1.990715573 0.097797928 0.068715751 9.24E-08 7.034093914 -0.258800315 GNHECASINR ddPTM_A459_MK2206_30min_R1 3 GNHECASINR 10 0 P62136-3;P62136;P62136-2;E9PMD7;F8VYE8;F8W0W8;P36873;P36873-2;F8VR82;E7ETD8;C9JP48;A0A087WYY5;P62140 P62136-3;P62140 PPP1CA;PPP1CC;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit 0 ;; 136.49 0.0025994 9140500 10601.2 9885.1 10076.1 9010 9001.2 9128.5 10714.8 9047.7 2243.46 7576.5 FALSE TRUE 9699.512271 9241.578193 9392.162406 9703.951761 8642.663144 9645.347781 10000.03524 8968.596913 2476.675695 8515.13402 1.13909097 1.085312125 1.102996428 1.139612335 1.014976761 1.132730003 1.174383776 1.053253759 0.29085575 1 13.05581352 -8.101938982 8.49429587 0.647672806 1.109648837 0.56048671 0.163593876 0.206371848 15.59425226 0.099225386 0.0373312 7.91E-09 8.101938982 0.461976031 GNHECASINR ddPTM_A459_MK2206_30min_R2 3 GNHECASINR 10 0 P62136-3;P62136;P62136-2;E9PMD7;F8VYE8;F8W0W8;P36873;P36873-2;F8VR82;E7ETD8;C9JP48;A0A087WYY5;P62140 P62136-3;P62140 PPP1CA;PPP1CC;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit 0 ;; 163.66 0.00054567 26396600 53420.1 65182.3 54572.7 77199.4 67521.5 67109 70931.2 60987.5 55957.2 57981.1 FALSE TRUE 57509.98393 61945.44177 56392.12658 70891.96207 64870.26664 69662.88002 61617.84824 68958.77565 60824.25611 56089.18146 1.025331132 1.104409802 1.005401133 1.263915077 1.156555773 1.24200208 1.098569218 1.229448779 1.084420463 1 15.77543491 -5.74360924 24.99999332 1.164637938 1.050983594 0.271985713 0.079751305 288.9304386 405112.1187 0.020014252 0.034571543 1.80E-06 5.74360924 -0.113654344 GNIETTS(ph)EDGQVFSPK ddPTM_A459_MK2206_30min_R1 1 GNIETTSEDGQVFSPK 16 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GNIET(0.004)T(0.054)S(0.943)EDGQVFSPK 173.51 4.47E-06 7143000 1975.6 2714.4 2246.2 1715.5 2248 1907 1861.1 2086 1814.8 1738.1 TRUE FALSE 1807.564846 2537.692067 2093.734202 1847.628107 2158.4574 2014.972692 1736.949415 2067.762322 2003.454954 1953.42895 0.925329199 1.29909617 1.071825112 0.945838397 1.104958232 1.031505493 0.889179724 1.058529578 1.025609329 1 10.93179307 -5.523685737 24.9994401 1.010334558 1.13052467 0.148528534 0.100709737 38.96904143 1207200.333 0.025902252 0.04537115 2.99E-06 5.523685737 0.120190113 GNIETTSEDGQVFS(ph)PK ddPTM_A459_MK2206_30min_R1 8 GNIETTSEDGQVFSPK 16 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GNIETTS(0.001)EDGQVFS(0.999)PK;GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK;GNIETT(0.001)S(0.003)EDGQVFS(0.995)PK;GNIETTSEDGQVFS(1)PK;GNIETT(0.001)S(0.007)EDGQVFS(0.992)PK;GNIETTS(0.001)EDGQVFS(0.999)PK 238.88 2.27E-21 186450300 21110.92 24414.34 22674.64 20795 17843.03 14314.55 18200.76 17809.51 20877.9 18023.5 TRUE FALSE 19315.3254 22824.96203 21135.54861 22396.6345 17132.30433 15125.02745 16986.62051 17653.80333 23048.23242 20256.38725 0.953542463 1.126803203 1.043401686 1.105657896 0.845772947 0.746679418 0.838580952 0.871517863 1.137825424 1 14.30608927 -6.261685159 24.99675276 0.8888954 1.061315762 0.308877943 0.108360362 25.45101812 2588444.53 0.033792314 0.040769859 5.47E-07 6.261685159 0.172420362 GNIETTSEDGQVFS(ph)PK ddPTM_A459_MK2206_30min_R2 5 GNIETTSEDGQVFSPK 16 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GNIETTSEDGQVFS(1)PK;GNIETTS(0.009)EDGQVFS(0.991)PK;GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK;GNIET(0.001)T(0.007)S(0.037)EDGQVFS(0.955)PK 200.9 6.57E-07 197745400 374685 356060 351928 323721 323285 247098.3 402827 305954 283191 385347 TRUE FALSE 403371.1717 338378.5782 363661.1039 297271.9588 310591.2065 256501.799 349935.331 345943.2383 307822.4413 372773.1589 1.082082124 0.907733215 0.975556032 0.797460739 0.833190907 0.688090848 0.938735321 0.928026147 0.825763427 1 18.50793846 -4.267800373 1.041016026 0.856950073 1.476942016 0.338349287 0.087814632 5.270434451 2.221392006 0.028090116 4.694602899 5.40E-05 4.267800373 0.619991942 GNIETTSEDGQVFS(ph)PKK ddPTM_A459_MK2206_30min_R1 1 GNIETTSEDGQVFSPKK 17 1 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GNIETTSEDGQVFS(1)PKK 84.707 0.0062256 5594100 1673.4 1705.8 1661 1683 1593.2 1214.9 1611.6 1705.5 1742.1 1198.5 TRUE FALSE 1531.068543 1594.75211 1548.255948 1812.624952 1529.73947 1283.686588 1504.093105 1690.588993 1923.197529 1346.979228 1.136668265 1.18394707 1.149428228 1.345696291 1.135681559 0.953011421 1.116641647 1.255096558 1.427785588 1 10.39551189 -10.97394839 3.355113103 0.997354217 1.183863902 0.17172294 0.124220808 97267900.89 179047309.9 2581810.294 0.033019218 1.06E-11 10.97394839 0.186509685 GNIETTSEDGQVFS(ph)PKK ddPTM_A459_MK2206_30min_R2 2 GNIETTSEDGQVFSPKK 17 1 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GNIETTSEDGQVFS(1)PKK;GNIETTSEDGQVFS(1)PKK 83.064 0.0070263 13964900 39579 48707 48390 38612 59069 38841 61590 44300 49902 62425 TRUE FALSE 42609.19867 46288.28121 50003.29845 35457.27609 56749.65426 40319.12147 53503.15902 50090.1621 54242.38576 60388.07736 0.705589589 0.766513577 0.828032629 0.587156896 0.939749314 0.667666918 0.88598878 0.829471053 0.89823005 1 15.88197612 -8.231144707 0.493114541 1.005838725 0.736949532 0.43066492 0.09238186 0.864262425 0.54138973 0.096414478 0.053836704 5.87E-09 8.231144707 -0.268889193 GNIWS(ph)AEK ddPTM_A459_MK2206_30min_R1 1 GNIWSAEK 8 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 GNIWS(1)AEK 94.363 0.022767 8599800 5180.6 5699 5128.7 4431.9 4016.7 3458.9 4483 4022.3 5015.4 4695.5 TRUE FALSE 4739.962766 5327.994064 4780.578133 4773.245706 3856.706333 3654.739929 4183.94725 3987.133455 5536.768778 5277.213989 0.898194156 1.009622516 0.905890522 0.904501071 0.730822427 0.69255102 0.792832593 0.755537574 1.049184056 1 12.36556077 -6.056720513 5.954391233 0.814854745 0.93932575 0.130880913 0.110910835 0.344896892 26.54695356 0.032824959 0.043327761 8.78E-07 6.056720513 0.124471005 GNIWS(ph)AEK ddPTM_A459_MK2206_30min_R2 2 GNIWSAEK 8 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 GNIWS(1)AEK;GNIWS(1)AEK 103.26 0.015562 11072000 89314 79806 82150 75925 85856 75460 81021 65402 60902 85754 TRUE FALSE 96151.94851 75842.95009 84888.84 69721.68463 82484.86205 78331.68318 70382.84538 73950.26596 66199.14587 82955.854 1.159073698 0.914256757 1.023301381 0.840467324 0.994322378 0.94425745 0.848437355 0.891441199 0.798004513 1 16.34005617 -1.588952881 0.995208501 0.905010868 199.9999987 0.491988556 0.072321016 1180.933072 1.913742597 0.022132686 535703.7618 0.025766007 1.588952881 199.0949878 GNKHDDGTQS(ph)DSENAGAHR ddPTM_A459_MK2206_30min_R1 4 GNKHDDGTQSDSENAGAHR 19 1 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 GNKHDDGT(0.067)QS(0.61)DS(0.323)ENAGAHR;GNKHDDGT(0.001)QS(0.97)DS(0.029)ENAGAHR;GNKHDDGT(0.046)QS(0.928)DS(0.027)ENAGAHR;GNKHDDGT(0.001)QS(0.996)DS(0.002)ENAGAHR 103.31 0.00043301 12621240 6219.69 6836.01 6088.51 5544.42 5308.08 5180.62 6977.343 6147.82 2050.74 5024.51 TRUE FALSE 5690.672705 6390.984506 5675.238905 5971.452189 5096.647934 5473.942227 6511.897179 6094.070258 2263.921762 5646.984232 1.007736603 1.131751789 1.005003498 1.057458626 0.902543327 0.96935674 1.153163691 1.07917253 0.400908108 1 12.46326489 -8.226374711 24.99651159 0.700453758 1.037927972 0.444007353 0.151210751 435.8363996 310695.1033 0.094697706 0.035789162 5.94E-09 8.226374711 0.337474214 GNKHDDGTQS(ph)DSENAGAHR ddPTM_A459_MK2206_30min_R2 4 GNKHDDGTQSDSENAGAHR 19 1 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 GNKHDDGT(0.037)QS(0.741)DS(0.223)ENAGAHR;GNKHDDGTQS(0.937)DS(0.062)ENAGAHR;GNKHDDGTQS(0.997)DS(0.003)ENAGAHR;GNKHDDGT(0.004)QS(0.99)DS(0.006)ENAGAHR 113.7 0.0002226 47649800 28057.8 33531.7 30754.8 33662.4 36362.7 31326.9 35804.6 28230.8 29487.3 31809 TRUE FALSE 30205.92674 31866.56454 31780.14968 30912.07424 34934.91769 32519.06713 31103.41301 31920.66249 32052.05205 30771.07494 0.981633784 1.035601278 1.032792964 1.004582203 1.135316779 1.056806342 1.01080034 1.037359356 1.041629261 1 14.90928722 -3.478657273 1.149436148 1.044142515 4.84E-13 0.180059305 0.036400175 47.79073464 4.599294369 0.011287628 114.039226 0.000332156 3.478657273 -1.044142515 GNKHDDGTQSDS(ph)ENAGAHR ddPTM_A459_MK2206_30min_R2 1 GNKHDDGTQSDSENAGAHR 19 1 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 GNKHDDGT(0.019)QS(0.432)DS(0.549)ENAGAHR 59.539 0.023346 649580 1068.8 2299.7 1100.6 2888.3 2377.6 2303.1 2382 2310.1 870.37 2437.7 TRUE FALSE 1150.62815 2185.500242 1137.293455 2652.316651 2284.243478 2390.746084 2069.240539 2612.038002 946.0732093 2358.158049 0.487935128 0.926782767 0.48228042 1.124740834 0.968655803 1.013819275 0.877481702 1.107660279 0.401191604 1 11.2034447 -4.757646228 24.94350836 0.8838274 0.487934545 0.201458009 0.232764475 172.9607295 1137209.568 0.055671086 0.406540802 1.75E-05 4.757646228 -0.395892855 GNKS(ph)PSPPDGS(ph)PAATPEIR ddPTM_A459_MK2206_30min_R2 2 GNKSPSPPDGSPAATPEIR 19 1 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 2 GNKS(0.969)PS(0.031)PPDGS(0.996)PAAT(0.004)PEIR;GNKS(0.991)PS(0.01)PPDGS(0.993)PAAT(0.007)PEIR 94.955 0.0034922 17395200 71889 77221 81679 98147 89956 78685 100829 80020 75307 99269 TRUE FALSE 77392.87711 73386.31743 84402.13709 90128.07614 86423.87545 81679.41281 87590.03118 90478.88875 81857.06674 96029.86066 0.805925121 0.764203102 0.878915543 0.938542194 0.899968769 0.850562651 0.912112447 0.942195356 0.852412637 1 16.55119546 -2.488250248 0.352977316 0.928556975 2.36E-31 0.497523223 0.046724941 27.53298336 0.731578672 0.040387309 15.15263069 0.003249 2.488250248 -0.928556975 GNKS(ph)PSPPDGSPAATPEIR ddPTM_A459_MK2206_30min_R1 4 GNKSPSPPDGSPAATPEIR 19 1 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 GNKS(0.858)PS(0.142)PPDGSPAATPEIR;GNKS(0.9)PS(0.099)PPDGSPAATPEIR;GNKS(0.769)PS(0.23)PPDGSPAATPEIR;GNKS(0.642)PS(0.291)PPDGS(0.068)PAATPEIR 171.33 1.41E-08 173512000 12263.1 12460.9 13472 10690.5 12378 11899.9 12482.7 12376.3 10654.2 10425.2 TRUE FALSE 11220.05895 11649.69315 12557.55818 11513.88416 11884.95805 12573.66205 11650.00186 12268.09531 11761.74222 11716.75248 0.957608259 0.994276628 1.071760984 0.982685619 1.014355989 1.073135416 0.994302976 1.047055943 1.003839778 1 13.51628513 -4.992533204 6.113870777 1.024652319 0.965081966 0.318852634 0.029943057 0.154410022 24.65334037 0.007150448 0.025726781 1.02E-05 4.992533204 -0.059570354 GNKS(ph)PSPPDGSPAATPEIR ddPTM_A459_MK2206_30min_R2 2 GNKSPSPPDGSPAATPEIR 19 1 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 GNKS(0.594)PS(0.406)PPDGSPAATPEIR;GNKS(0.729)PS(0.271)PPDGSPAATPEIR 90.378 0.0014881 130998000 93105 101761 99791 103695 108091 88578 124727 92090 88103 115374 TRUE FALSE 100233.1904 96707.69671 103117.9821 95222.7868 103846.8042 91948.89786 108350.1951 104126.4792 95766.03969 111609.3558 0.898071579 0.866483782 0.9239188 0.853179253 0.930448917 0.823845789 0.970798499 0.932954755 0.858046702 1 16.76809844 -14.52287874 0.221779087 1.528803485 0.883735321 0.344128121 0.042962999 171.7537354 1.714432285 40.62538031 0.077303808 3.00E-15 14.52287874 -0.645068164 GNKSPS(ph)PPDGSPAATPEIR ddPTM_A459_MK2206_30min_R1 1 GNKSPSPPDGSPAATPEIR 19 1 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 GNKS(0.143)PS(0.857)PPDGSPAATPEIR 126.43 0.0017509 22903000 1629 1688.1 1798.2 1994.2 2108.8 1398.4 1539.8 1620.3 1435.3 1165.7 TRUE FALSE 1490.444996 1578.204383 1676.143194 2147.79363 2024.802031 1477.5762 1437.082752 1606.133888 1584.504571 1310.115717 1.13764378 1.204629761 1.279385609 1.639392309 1.545513885 1.127821139 1.09691284 1.225948111 1.209438641 1 10.35547853 -6.79570643 24.98425662 1.143951266 1.363505841 0.365612908 0.150591724 243.2583502 177359.1292 0.059494596 0.052471776 1.60E-07 6.79570643 0.219554576 GNLELRPGGAHPGT(ph)CSPSRPGS ddPTM_A459_MK2206_30min_R2 1 GNLELRPGGAHPGTCSPSRPGS 22 2 Q5JTU8;B1AMJ5;A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8 Q5JTU8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 GNLELRPGGAHPGT(0.445)CS(0.445)PS(0.11)RPGS(0.001) 72.383 0.0096995 25985000 12416 12812 11015 14805 15274 15976 14641 13361 11868 13411 TRUE FALSE 13366.57851 12175.77471 11382.2346 13595.38414 14674.26601 16583.97787 12718.61911 15107.32858 12900.25719 12973.40017 1.030306499 0.938518396 0.877351693 1.047943019 1.131104092 1.2783062 0.980361274 1.164484898 0.994362081 1 13.66326902 -5.956640475 5.921690285 1.102449296 0.948433588 0.32079898 0.091976471 0.203272972 17.52573847 0.025828578 0.038305823 1.10E-06 5.956640475 -0.154015709 GNLELRPGGAHPGTCS(ph)PSRPGS ddPTM_A459_MK2206_30min_R2 2 GNLELRPGGAHPGTCSPSRPGS 22 2 Q5JTU8;B1AMJ5;A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8 Q5JTU8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 GNLELRPGGAHPGT(0.207)CS(0.743)PS(0.042)RPGS(0.008);GNLELRPGGAHPGT(0.041)CS(0.818)PS(0.131)RPGS(0.01) 74.505 0.0022018 27164900 32570 39627 38526 39536 36243 35754 36548 34971 38654 33786 TRUE FALSE 35063.58424 37659.1808 39810.43761 36305.78233 34819.91771 37114.64352 31749.2037 39541.82977 42016.05505 32683.56559 1.072820043 1.152235998 1.218056748 1.110826854 1.06536472 1.135575108 0.971411874 1.209838311 1.285540739 1 14.99627776 -11.43710692 2.542656244 0.919403121 1.133185906 0.187567353 0.084601287 25685113.52 16695596.26 12385454.03 0.021964707 3.66E-12 11.43710692 0.213782785 GNLLHFPSS(ph)QGEEEKEK ddPTM_A459_MK2206_30min_R2 1 GNLLHFPSSQGEEEKEK 17 1 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 GNLLHFPS(0.488)S(0.512)QGEEEKEK 61.649 0.023742 10795000 113390 73301 89519 86359 71335 46206 98538 70844 54792 98954 TRUE FALSE 122071.2256 69660.97893 92503.51878 79303.19345 68534.02947 47964.40171 85599.84223 80103.55404 59557.70912 95725.13908 1.275226411 0.727718754 0.966345097 0.828446887 0.71594599 0.501063798 0.894225311 0.836807915 0.622174172 1 16.54661023 -2.987015704 1.693613322 0.776139191 200 0.477544544 0.148886531 484.7402552 4.503739412 0.04068098 372603.6289 0.001030349 2.987015704 199.2238608 GNPS(ph)PPAAGEGQRPPPPLCVPGGGGGAPAR ddPTM_A459_MK2206_30min_R2 2 GNPSPPAAGEGQRPPPPLCVPGGGGGAPAR 30 1 Q92623 Q92623 TTC9 Tetratricopeptide repeat protein 9A 1 GNPS(1)PPAAGEGQRPPPPLCVPGGGGGAPAR;GNPS(1)PPAAGEGQRPPPPLCVPGGGGGAPAR 77.445 1.95E-05 14279000 16399 20426.4 18048.9 19535.8 18446.5 23910.4 24065 16224.3 16788.7 19957.3 TRUE FALSE 17654.52005 19412.05468 18650.64132 17939.66265 17722.19772 24820.32703 20905.23659 18344.87172 18248.95078 19306.09494 0.914453187 1.005488409 0.966049394 0.929222751 0.917958696 1.285621308 1.082830923 0.950211411 0.945242984 1 14.23676876 GNPT(ph)VEVDLFTSK ddPTM_A459_MK2206_30min_R1 1 GNPTVEVDLFTSK 13 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798 P06733 ENO1 Alpha-enolase;Enolase 1 GNPT(1)VEVDLFTSK 105.39 0.017112 2671500 1051 1031.4 882.32 945.57 751.65 804.42 800 1053.4 848.28 611.53 TRUE FALSE 961.606931 964.2556725 822.4305767 1018.397965 721.7101889 849.9655652 746.6334597 1044.190235 936.4617416 687.2909532 1.39912642 1.402980307 1.196626513 1.481756686 1.05007957 1.236689587 1.086342627 1.519284126 1.362540475 1 9.424777159 -5.16344497 1.063901966 1.245998388 1.444768018 0.119211172 0.165578027 2.620964017 3.697893422 0.056171403 0.510333859 6.86E-06 5.16344497 0.19876963 GNPTVEVDLFT(ph)SK ddPTM_A459_MK2206_30min_R1 1 GNPTVEVDLFTSK 13 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798 P06733 ENO1 Alpha-enolase;Enolase 1 GNPTVEVDLFT(0.5)S(0.5)K 176.56 0.00023749 9371300 3666.1 4429.3 4215.8 3800 2776.5 3149.9 2834.1 2854.5 3638.2 2731.6 TRUE FALSE 3354.278944 4140.951765 3929.643242 4092.676658 2665.906126 3328.244616 2645.04236 2829.543407 4016.403909 3070.011231 1.092595008 1.348839289 1.280009403 1.333114556 0.868370154 1.084114802 0.861574164 0.921672005 1.308270103 1 11.58402822 -6.252331929 24.97818481 0.999968231 1.270894542 0.457189872 0.136584226 567.7496221 1557115.645 0.039755026 0.050585377 5.59E-07 6.252331929 0.270926311 GNPTVEVDLFTS(ph)K ddPTM_A459_MK2206_30min_R1 1 GNPTVEVDLFTSK 13 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798 P06733 ENO1 Alpha-enolase;Enolase 1 GNPTVEVDLFT(0.064)S(0.936)K 225.32 7.33E-51 0 3532.2 4120.6 3743.6 3092.2 2610.9 2039.6 2560.9 2801.5 2721.1 2645.8 TRUE FALSE 3231.767842 3852.348191 3489.494862 3330.36178 2506.902324 2155.080389 2390.067034 2777.006781 3003.968083 2973.581679 1.086826659 1.295524592 1.173498911 1.119983286 0.843058169 0.724742288 0.80376707 0.933892888 1.010218789 1 11.53798599 -6.156533258 3.75398601 0.870368486 1.190131742 0.682537571 0.094742035 0.139553534 3.566884622 0.030699887 0.040529637 6.97E-07 6.156533258 0.319763256 GNPTVEVDLFTSK ddPTM_A459_MK2206_30min_R1 2 GNPTVEVDLFTSK 13 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798 P06733 ENO1 Alpha-enolase;Enolase 0 ; 203.82 0.00069495 68017000 4756.6 5059.3 5535.2 5670.1 5749.9 5161.8 4998 5331.9 4464 4318.7 FALSE TRUE 4352.026192 4729.93865 5159.486046 6106.812084 5520.869307 5454.056655 4664.592539 5285.28376 4928.048775 4853.733161 0.896634827 0.974494991 1.062993345 1.25816807 1.137448048 1.123682839 0.961031928 1.088911068 1.015311022 1 12.24487908 -5.12076983 2.785416765 1.090188224 0.90659604 0.365901194 0.079190667 0.314445064 4.474243091 0.022527244 0.090146921 7.57E-06 5.12076983 -0.183592183 GNPTVEVDLFTSK ddPTM_A459_MK2206_30min_R2 1 GNPTVEVDLFTSK 13 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798 P06733 ENO1 Alpha-enolase;Enolase 0 190.1 0.0022324 5981900 29575 33109 30938 36421 35059 30374 42219 27956 36057 27738 FALSE TRUE 31839.28474 31464.8552 31969.45748 33445.28779 33682.4075 31529.90385 36675.59459 31609.94519 39193.17268 26832.91133 1.186575856 1.172621741 1.191427091 1.246427843 1.255264741 1.175045953 1.36681384 1.178028906 1.460638102 1 14.71171597 -5.732964969 3.694080086 1.251488421 1.180010195 0.043643066 0.114738031 0.635085433 18.27713728 0.03016578 0.052334526 1.85E-06 5.732964969 -0.071478226 GNRGS(ph)GGGGGGGGQGSTNYGK ddPTM_A459_MK2206_30min_R1 4 GNRGSGGGGGGGGQGSTNYGK 21 1 Q99729-3;Q99729-4 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK 153.19 8.81E-07 22654500 5742.3 5322.6 5475.11 5044.5 5270.95 4766.33 5469.26 5413.89 2533.2 2527.86 TRUE FALSE 5253.887231 4976.097773 5103.474788 5433.028264 5060.9969 5036.195486 5104.415645 5366.556931 2796.535205 2841.030381 1.849289351 1.751511637 1.796346432 1.912344303 1.781394854 1.772665128 1.796677599 1.888947392 0.984338367 1 11.47219854 -8.264224223 24.99971689 0.992169039 1.815282345 0.978630607 0.048849478 31.3849961 281736.9789 0.041120435 0.012457729 5.44E-09 8.264224223 0.823113306 GNRGS(ph)GGGGGGGGQGSTNYGK ddPTM_A459_MK2206_30min_R2 3 GNRGSGGGGGGGGQGSTNYGK 21 1 Q99729-3;Q99729-4 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK 165.34 2.30E-10 13701300 21421.4 40642.4 31166.6 37910.1 43721 32788.1 34009.9 26801.8 33717.7 32026.6 TRUE FALSE 23061.43885 38624.15752 32205.67889 34812.72356 42004.29386 34035.87412 29544.35928 30304.88728 36650.4046 30981.57466 0.744359804 1.24668155 1.039510717 1.123658947 1.355783052 1.098584384 0.953610641 0.978158393 1.182974235 1 14.91912285 -10.55095706 13.48394937 0.999998033 1.087233907 0.020479652 0.160548067 0 0 0.153684902 0.037274064 2.81E-11 10.55095706 0.087235874 GNS(ph)LPCVLEQK ddPTM_A459_MK2206_30min_R1 2 GNSLPCVLEQK 11 0 Q08495;Q08495-4 Q08495 DMTN Dematin 1 GNS(1)LPCVLEQK;GNS(1)LPCVLEQK 121.18 0.0045149 12638800 5873.2 5001.7 5201.6 4485.9 4963.4 4826.9 5214.4 4047.9 5106.6 5109.1 TRUE FALSE 5373.653499 4676.088421 4848.529884 4831.404795 4765.697268 5100.194907 4866.55689 4012.509637 5637.449344 5742.05388 0.935841706 0.814358158 0.844389479 0.841407081 0.829963871 0.888217877 0.847528949 0.698793449 0.981782732 1 12.48735115 -8.446287757 11.68284517 0.999993255 0.838928816 0.539364101 0.056792365 0.5544137 82.79695591 0.052948352 0.013672828 3.58E-09 8.446287757 -0.161064439 GNS(ph)LPCVLEQK ddPTM_A459_MK2206_30min_R2 1 GNSLPCVLEQK 11 0 Q08495;Q08495-4 Q08495 DMTN Dematin 1 GNS(1)LPCVLEQK 105.95 0.0114 5190400 52612 49845 44954 51656 41597 37496 52528 45292 35483 35228 TRUE FALSE 56640.01517 47369.76978 46452.74392 47435.53956 39963.69277 38922.93655 45631.0105 51211.81991 38569.2472 34078.51325 1.662044784 1.390018674 1.363109464 1.391948622 1.172694727 1.142154773 1.338996516 1.502759805 1.131776111 1 15.05657478 -1.522878746 0.597250869 1.245367174 26.04602937 0.483273509 0.135010955 162.0857133 1.26816742 0.062228317 5241.480599 0.03 1.522878746 24.8006622 GNS(ph)PEMR ddPTM_A459_MK2206_30min_R2 1 GNSPEMR 7 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 GNS(1)PEMR 96.665 0.022999 19992000 99318 136520 105720 119520 124930 98046 125360 127950 137950 117820 TRUE FALSE 106921.8624 129740.6153 109244.652 109754.8337 120024.6205 101777.2092 108900.0814 144673.5043 149948.6416 113975.543 0.938112332 1.138319782 0.958492051 0.962968289 1.053073469 0.892974111 0.955468853 1.269338144 1.315621208 1 16.79836476 -7.758900751 24.99998933 1.219359786 0.988617459 0.472220801 0.100404624 50.43817156 496723.5725 0.048179967 0.026152915 1.74E-08 7.758900751 -0.230742327 GNS(ph)PPSSGEACR ddPTM_A459_MK2206_30min_R1 3 GNSPPSSGEACR 12 0 P41227;P41227-2 P41227 NAA10 N-alpha-acetyltransferase 10 1 GNS(0.999)PPSS(0.001)GEACR;GNS(0.993)PPS(0.004)S(0.004)GEACR;GNS(0.976)PPS(0.012)S(0.012)GEACR 135.86 0.0014554 59471600 2580.04 2889.01 3011.79 1956.78 2417.61 2648.6 3274.05 2644.71 2408.4 2411.57 TRUE FALSE 2360.59405 2700.934924 2807.358086 2107.491535 2321.311474 2798.561443 3055.644098 2621.587579 2658.761799 2710.333498 0.870960733 0.996532318 1.035798026 0.777576463 0.856467101 1.032552431 1.127405207 0.967256458 0.980972194 1 11.40425467 -6.777860899 24.63645008 1.026201326 0.912328376 0.343652334 0.078621979 265.5032088 398319.2878 0.029958417 0.026500638 1.67E-07 6.777860899 -0.11387295 GNS(ph)PPSSGEACR ddPTM_A459_MK2206_30min_R2 3 GNSPPSSGEACR 12 0 P41227;P41227-2 P41227 NAA10 N-alpha-acetyltransferase 10 1 GNS(0.921)PPS(0.03)S(0.049)GEACR;GNS(0.926)PPS(0.058)S(0.016)GEACR;GNS(0.854)PPS(0.073)S(0.073)GEACR 123.1 0.0033806 135273800 35873.3 42304.6 39107.3 53080.1 47458.6 51461 46648.9 43267.7 46295.3 41673.7 TRUE FALSE 38619.78743 40203.81508 40411.11786 48743.28604 45595.1369 53419.38442 40523.84339 48922.93695 50321.98151 40313.89058 0.957977185 0.997269539 1.002411756 1.20909407 1.131003142 1.325086308 1.005207952 1.213550373 1.248254157 1 15.2989894 -5.71786498 7.162473452 1.169595978 0.985355136 0.411682757 0.096053609 0.191961668 24.71760748 0.024998926 0.043029779 1.91E-06 5.71786498 -0.184240842 GNS(ph)RPGTPSAEGGS(ph)TSSTLR ddPTM_A459_MK2206_30min_R1 1 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 2 GNS(1)RPGTPSAEGGS(0.554)T(0.217)S(0.16)S(0.04)T(0.03)LR 144.95 0.00097166 7396000 1775.5 1613.3 1360.5 1010.6 1512.5 1483.8 1779.2 1284.8 1584.2 1744.3 TRUE FALSE 1624.484401 1508.273877 1268.153051 1088.436587 1452.253922 1567.811474 1660.512814 1273.567129 1748.883259 1960.397053 0.828650706 0.76937163 0.646885818 0.555212316 0.74079581 0.799741803 0.847028826 0.649647543 0.892106656 1 10.93693017 -6.687758632 3.777427704 0.817393323 0.696182876 0.263966291 0.106676268 0.371936719 10.44547208 0.037893969 0.036975266 2.05E-07 6.687758632 -0.121210447 GNS(ph)RPGTPSAEGGSTSSTLR ddPTM_A459_MK2206_30min_R1 2 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 GNS(0.971)RPGT(0.024)PSAEGGS(0.002)T(0.002)SSTLR;GNS(1)RPGTPSAEGGSTSSTLR 101.54 0.0003817 32235700 2422.52 2400.3 2128.98 1804.73 2460.1 2431.4 3069.9 2345.6 2671.4 2700.2 TRUE FALSE 2216.471953 2244.040034 1984.470769 1943.730617 2362.109008 2569.063767 2865.112572 2325.092666 2949.10159 3034.721161 0.730370876 0.739455098 0.653921947 0.640497269 0.778361135 0.846556777 0.944110651 0.766163526 0.971786676 1 11.56734825 -6.689188686 2.288486682 0.90010661 0.692605413 0.700194135 0.066801819 0.178059409 1.909771311 0.024820312 0.023984091 2.05E-07 6.689188686 -0.207501197 GNS(ph)RPGTPSAEGGSTSSTLR ddPTM_A459_MK2206_30min_R2 5 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 GNS(0.958)RPGT(0.032)PS(0.008)AEGGSTS(0.001)STLR;GNS(1)RPGTPSAEGGSTSSTLR;GNS(0.816)RPGT(0.169)PS(0.012)AEGGS(0.001)TSSTLR;GNS(0.974)RPGT(0.023)PS(0.003)AEGGSTSSTLR;GNS(0.948)RPGT(0.051)PSAEGGSTSSTLR 101.5 0.0032573 65839600 30532.5 27772.6 29844 26832.4 27465.6 28241.8 41221.2 33842.6 28321.6 39414.9 TRUE FALSE 32870.09168 26393.45307 30838.98406 24640.10709 26387.16254 29316.56149 35808.80692 38265.94402 30784.96157 38128.79504 0.862080526 0.692218389 0.808810875 0.646233563 0.692053408 0.768882454 0.939153909 1.003596992 0.807394032 1 15.21859332 -7.215444275 4.313809576 0.938953138 0.736217071 0.603903855 0.076519855 0.144750232 5.956521218 0.030112021 0.022300903 6.09E-08 7.215444275 -0.202736067 GNSPPS(ph)SGEACREEK ddPTM_A459_MK2206_30min_R2 1 GNSPPSSGEACREEK 15 1 P41227;P41227-2 P41227 NAA10 N-alpha-acetyltransferase 10 1 GNS(0.065)PPS(0.468)S(0.468)GEACREEK 60.764 0.045277 32241000 8799.6 18578 10313 17225 18397 14923 16484 11391 18658 12158 TRUE FALSE 9473.304142 17655.44353 10656.83027 15817.6624 17674.64134 15490.90522 14319.631 12879.84281 20280.83911 11761.28546 0.80546503 1.501149139 0.906094008 1.344892313 1.502781427 1.317109875 1.217522613 1.095105026 1.724372662 1 13.52175813 -4.744764541 24.74309498 1.287830811 0.805463429 0.274877832 0.236018363 1179.906927 1750707.345 0.055911503 1.516384234 1.80E-05 4.744764541 -0.482367382 GNSPPSS(ph)GEACR ddPTM_A459_MK2206_30min_R2 1 GNSPPSSGEACR 12 0 P41227;P41227-2 P41227 NAA10 N-alpha-acetyltransferase 10 1 GNS(0.049)PPS(0.332)S(0.619)GEACR 89.46 0.025748 136610000 15418 12705 13840 18673 14626 16762 18126 12621 13276 16508 TRUE FALSE 16598.41393 12074.08817 14301.41869 17147.35617 14051.70975 17399.88966 15746.03443 14270.60803 14430.72248 15969.34531 1.039392261 0.756079096 0.895554477 1.07376701 0.87991771 1.089580651 0.986016278 0.893625115 0.903651477 1 13.96301755 -5.550500808 24.99427549 0.973005257 0.879755884 0.124980418 0.092302179 354.3196519 320610.2555 0.024342189 0.04216289 2.82E-06 5.550500808 -0.093249373 GNSRPGT(ph)PS(ph)AEGGSTSSTLR ddPTM_A459_MK2206_30min_R1 1 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 2 GNS(0.01)RPGT(0.99)PS(0.948)AEGGS(0.036)T(0.009)S(0.007)STLR 135.36 0.010726 11535000 2567.3 2066 2331.1 1466.3 1908.7 1957.3 2567.4 1558 2498.4 2524.5 TRUE FALSE 2348.937654 1931.503024 2172.871427 1579.23468 1832.672437 2068.120635 2396.13343 1544.37857 2758.117621 2837.254119 0.827891178 0.680764903 0.765836029 0.55660671 0.645931721 0.728916251 0.844525492 0.544321554 0.972108068 1 11.47027966 -8.345198334 7.75781212 0.992321487 0.700428022 0.591595478 0.095306503 0.223301615 18.27549238 0.089860775 0.023268269 4.52E-09 8.345198334 -0.291893464 GNSRPGT(ph)PSAEGGSTSSTLR ddPTM_A459_MK2206_30min_R1 5 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 GNSRPGT(0.807)PS(0.005)AEGGS(0.063)T(0.063)S(0.018)S(0.03)T(0.014)LR;GNSRPGT(0.966)PS(0.024)AEGGS(0.005)T(0.005)SSTLR;GNS(0.011)RPGT(0.79)PS(0.194)AEGGS(0.001)T(0.001)S(0.001)S(0.001)T(0.001)LR;GNSRPGT(0.869)PS(0.116)AEGGS(0.007)T(0.002)S(0.005)S(0.001)TLR;GNSRPGT(0.982)PS(0.014)AEGGSTS(0.002)S(0.002)TLR 198.35 1.38E-14 66752800 4822.06 5313.89 4802.5 4791.78 5211.62 5785.14 8211.6 7231.45 8323.42 9111.11 TRUE FALSE 4411.918475 4967.954795 4476.519681 5160.843726 5004.03014 6112.689627 7663.819147 7168.226195 9188.669295 10239.86309 0.430857174 0.485158322 0.43716597 0.503995383 0.488681352 0.596950328 0.748429845 0.700031449 0.897342983 1 13.32190881 -7.713077564 0.585626575 1.002539142 0.436284557 0.957995363 0.038997242 0.139235497 0.100665557 0.036697302 0.021724812 1.94E-08 7.713077564 -0.566254585 down GNSRPGT(ph)PSAEGGSTSSTLR ddPTM_A459_MK2206_30min_R2 1 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 GNSRPGT(0.966)PS(0.006)AEGGS(0.013)T(0.013)S(0.001)S(0.001)TLR 243.23 2.23E-29 8029400 20990 18770 21079 22744 23721 25741 30629 31243 32340 46172 TRUE FALSE 22597.01054 17837.90909 21781.76334 20885.74245 22789.59435 26720.59179 26607.37551 35326.56737 35152.87474 44665.41142 0.505917439 0.399367397 0.487665123 0.46760439 0.510229138 0.598239016 0.595704252 0.790915526 0.787026776 1 15.44687043 -7.937372589 0.575335072 1.000288703 0.443632548 0.951553184 0.039171846 0.137488112 0.102061449 0.035939652 0.019688143 1.16E-08 7.937372589 -0.556656155 GNSRPGTPS(ph)AEGGSTSSTLR ddPTM_A459_MK2206_30min_R1 1 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 GNS(0.015)RPGT(0.315)PS(0.461)AEGGS(0.04)T(0.112)S(0.043)S(0.013)TLR 168 1.33E-08 9120700 1900.6 1712.5 1740 1292.4 1660.3 1570.6 2564 1644.3 2345.3 3064.3 TRUE FALSE 1738.94399 1601.015939 1621.893648 1391.940872 1594.166735 1659.526015 2392.960238 1629.924058 2589.102328 3443.928618 0.504930323 0.464880698 0.470942876 0.404172393 0.462891921 0.481870038 0.694834447 0.473274635 0.751787454 1 11.74983953 -8.733566963 0.577514067 1.014212091 0.455006363 0.839655237 0.071036816 0.426429717 0.307041824 0.079410628 0.031872908 1.85E-09 8.733566963 -0.559205728 GNSRPGTPSAEGGSTS(ph)STLR ddPTM_A459_MK2206_30min_R2 1 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 GNSRPGT(0.001)PSAEGGS(0.011)T(0.011)S(0.469)S(0.469)T(0.039)LR 150.13 6.97E-05 8713100 5735.1 4782.9 6853.8 7219.7 5607.3 6111.3 9959.3 9056.6 8523 11186 TRUE FALSE 6174.183666 4545.388141 7082.302271 6629.827415 5387.129228 6343.869804 8651.631947 10240.32872 9264.315134 10821.00174 0.570574131 0.420052436 0.654495993 0.612681485 0.497840159 0.586255317 0.799522277 0.94633833 0.856142098 1 13.40154644 -7.38484392 2.419562302 0.92644299 0.550892626 0.864455007 0.06821244 0.106667434 1.217781597 0.03510045 0.021098377 4.12E-08 7.38484392 -0.375550364 GNSS(ph)DHEGCWNEESWTFSQSGTSGSK ddPTM_A459_MK2206_30min_R2 1 GNSSDHEGCWNEESWTFSQSGTSGSK 26 0 C9JA69;Q8WY36-2;Q8WY36 C9JA69 BBX HMG box transcription factor BBX 1 GNS(0.255)S(0.737)DHEGCWNEES(0.008)WTFSQSGTSGSK 88.209 4.18E-05 4691400 15994 16893 15166 21161 20536 22894 23531 15586 21065 20045 TRUE FALSE 17218.51294 16054.11818 15671.62687 19432.07861 19729.65345 23765.24721 20441.35143 17623.14371 22897.19562 19390.93329 0.88796721 0.827918798 0.808193532 1.002121884 1.017467966 1.225585528 1.054170582 0.908834219 1.180819679 1 14.24309462 -5.916023607 3.125175914 1.065361374 0.83953011 0.569323393 0.086401589 0.184316914 3.620432808 0.025999811 0.040635856 1.21E-06 5.916023607 -0.225831264 GNT(ph)PATGTTQGK ddPTM_A459_MK2206_30min_R2 2 GNTPATGTTQGK 12 0 Q9P2E9;A0A087WVV2;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 GNT(0.571)PAT(0.174)GT(0.227)T(0.028)QGK;GNT(0.966)PAT(0.024)GT(0.01)TQGK 109.95 0.017358 5533500 37934 40817 36799 41517 34152 34047 47497 30990.3 26717 39469 TRUE FALSE 40838.25621 38790.08713 38025.86029 38124.92829 32811.02088 35342.68244 41260.58685 35040.83862 29040.79637 38181.12976 1.069592662 1.015949171 0.995933345 0.99852803 0.859351755 0.925658373 1.080653902 0.917752797 0.760606 1 15.22057217 -4.903208303 0.617691884 0.924077036 1.146156789 0.255442366 0.080422929 4.871526638 1.561321631 0.042619575 0.75411041 1.25E-05 4.903208303 0.222079754 GNVFSS(ph)PT(ph)AAGTPNKETAGLK ddPTM_A459_MK2206_30min_R2 1 GNVFSSPTAAGTPNKETAGLK 21 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 2 GNVFS(0.453)S(0.552)PT(0.894)AAGT(0.102)PNKETAGLK 84.125 0.0040962 6972800 46900 44387 41631 40544 37944 33713 43764 31410 27292 37530 TRUE FALSE 50490.70006 42182.80612 43018.95676 37231.42551 36454.12791 34995.97184 38017.73423 35515.39485 29665.80883 36305.39917 1.390721524 1.161887958 1.184918986 1.025506574 1.004096601 0.963932986 1.047164749 0.978240032 0.817118376 1 15.14789649 -1.522878745 0.395551652 0.939134328 7.960524702 0.824427419 0.061906034 28.09218479 0.375221427 0.044840744 153.1651985 0.03 1.522878745 7.021390374 GNVFSS(ph)PTAAGT(ph)PNKETAGLK ddPTM_A459_MK2206_30min_R1 3 GNVFSSPTAAGTPNKETAGLK 21 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 2 GNVFS(0.229)S(0.754)PT(0.042)AAGT(0.96)PNKET(0.015)AGLK;GNVFS(0.224)S(0.746)PT(0.048)AAGT(0.898)PNKET(0.084)AGLK;GNVFS(0.137)S(0.77)PT(0.128)AAGT(0.906)PNKET(0.06)AGLK 87.196 0.011645 28525000 18828.5 18889.8 17759.1 15993.8 13652.3 12302.7 13594 15014.1 14220.7 13094.4 TRUE FALSE 17227.0372 17660.07059 16553.66177 17225.64525 13108.49998 12999.26824 12687.16906 14882.83331 15698.99265 14716.63313 1.170582772 1.200007531 1.124826693 1.170488188 0.89072683 0.883304498 0.862097258 1.011293356 1.066751649 1 13.84516003 -6.253481815 24.95128099 0.944960793 1.165896428 0.738891005 0.062261436 320.8794784 1006130.547 0.020333253 0.025779026 5.58E-07 6.253481815 0.220935634 GNVFSSPTAAGT(ph)PNKETAGLK ddPTM_A459_MK2206_30min_R2 2 GNVFSSPTAAGTPNKETAGLK 21 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 GNVFSS(0.001)PT(0.18)AAGT(0.804)PNKET(0.014)AGLK;GNVFSSPT(0.015)AAGT(0.944)PNKET(0.041)AGLK 106.1 0.00019626 36060000 132077 134937 102185 86878 136767 80184 138981 91060 88478 128799 TRUE FALSE 142188.9167 128236.2248 105591.7969 79779.78949 131396.8404 83235.45831 120732.6278 102961.8547 96173.65651 124596.2992 1.141196951 1.029213754 0.847471374 0.640306253 1.054580603 0.668041177 0.96899048 0.826363667 0.771882128 1 16.92690169 -5.113581711 3.02072793 0.838683167 1.127090133 0.36936037 0.127827164 0.260191667 4.351074428 0.03157987 0.119901353 7.70E-06 5.113581711 0.288406965 GNVVPS(ph)PLPTR ddPTM_A459_MK2206_30min_R1 5 GNVVPSPLPTR 11 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 GNVVPS(0.962)PLPT(0.038)R;GNVVPS(0.868)PLPT(0.132)R;GNVVPS(0.973)PLPT(0.027)R;GNVVPS(0.759)PLPT(0.241)R;GNVVPS(0.948)PLPT(0.052)R 132.51 0.0019981 1588123000 25392.8 26789.3 26101.3 18746.3 22063.6 24227.9 31189.6 20799 31541.7 36279.9 TRUE FALSE 23233.00902 25045.3117 24329.61648 20190.14327 21184.76009 25599.66276 29108.99869 20617.15654 34820.57259 40774.52791 0.569792226 0.614239158 0.59668665 0.495165593 0.519558685 0.627834682 0.71390155 0.505638142 0.853978559 1 15.31538055 -8.44027942 3.740554973 0.997427654 0.583723603 0.835026991 0.063062755 0.081529198 2.101094736 0.06344226 0.016728447 3.63E-09 8.44027942 -0.413704051 GNVVPS(ph)PLPTR ddPTM_A459_MK2206_30min_R2 1 GNVVPSPLPTR 11 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 GNVVPS(0.999)PLPT(0.001)R 78.985 0.046542 3410800 7681.8 99537 10231 33108 10166 12868 13821 9454.1 10873 23090 TRUE FALSE 8269.924514 94594.13732 10572.09643 30402.97049 9766.83176 13357.70076 12006.2861 10689.78333 11818.71389 22336.57519 0.370241384 4.234943652 0.473308748 1.361129458 0.437257354 0.598019197 0.537516875 0.478577546 0.529119338 1 14.44712038 -5.376418445 20.6995712 0.666273088 2.317098667 0.339370919 0.907090782 5.090237282 899.8690447 0.215227201 0.448031539 4.20E-06 5.376418445 1.650825579 GNVVPS(ph)PLPTRR ddPTM_A459_MK2206_30min_R1 1 GNVVPSPLPTRR 12 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 GNVVPS(1)PLPTRR 127.18 0.0013503 245370000 4873.5 4609.3 4642.1 4375.7 5098.4 4880 4974.8 3983.2 3486.7 2590.8 TRUE FALSE 4458.983233 4309.233732 4327.007186 4712.717172 4895.319932 5156.301383 4642.940169 3948.375302 3849.154942 2911.767864 1.531366318 1.479937253 1.48604126 1.618507173 1.681219164 1.77084906 1.594543379 1.356006209 1.321930567 1 11.50767963 -8.390880646 1.279926492 1.015945451 1.595056598 0.79330045 0.094348825 0.210626636 0.731549934 0.102133742 0.031829339 4.07E-09 8.390880646 0.579111147 GNVVPS(ph)PLPTRR ddPTM_A459_MK2206_30min_R2 4 GNVVPSPLPTRR 12 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 GNVVPS(1)PLPTRR;GNVVPS(0.999)PLPT(0.001)RR;GNVVPS(0.996)PLPT(0.004)RR;GNVVPS(1)PLPTRR 169.58 0.00061369 397359000 917770 1637020 1371180 1673310 1575930 1677250 1536880 1107180 1432570 1329330 TRUE FALSE 988035.1768 1555727.967 1416894.457 1536595.22 1514051.07 1741078.924 1335085.81 1251892.228 1557172.349 1285954.071 0.768328511 1.209785017 1.101823532 1.194906766 1.177375696 1.353919991 1.038206449 0.973512395 1.210908215 1 20.29440769 -4.755336412 24.99526188 1.144408101 0.768327893 0.50986849 0.109261124 170.8223516 699550.6609 0.027650436 0.24794707 1.76E-05 4.755336412 -0.376080209 GNVVPSPLPT(ph)R ddPTM_A459_MK2206_30min_R1 1 GNVVPSPLPTR 11 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 GNVVPS(0.347)PLPT(0.653)R 101.43 0.035734 1160300000 6081 5702.9 5807 3622.3 5163.7 5945.8 6958.2 4153.2 7584 8268.2 TRUE FALSE 5563.779017 5331.640173 5412.837019 3901.290174 4958.018895 6282.446058 6494.031174 4116.88901 8372.38394 9292.527038 0.59873692 0.57375568 0.582493545 0.41983092 0.533549042 0.67607509 0.698844474 0.443032234 0.900980315 1 13.18185527 -8.393186782 4.779279607 0.993800798 0.569541022 0.773211355 0.083901948 0.102070463 3.267337517 0.084288306 0.02201602 4.04E-09 8.393186782 -0.424259776 GNVVPSPLPT(ph)R ddPTM_A459_MK2206_30min_R2 3 GNVVPSPLPTR 11 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 GNVVPS(0.156)PLPT(0.844)R;GNVVPS(0.009)PLPT(0.991)R;GNVVPS(0.159)PLPT(0.841)R 125.84 0.0076543 2589789000 757753 678570 685432 735383 636157 629047 760063 723500 511243 724536 TRUE FALSE 815767.1523 644873.2005 708283.9608 675299.8565 611178.2797 652985.8244 660265.8151 818063.9341 555709.992 700894.4497 1.163894439 0.920071775 1.010542973 0.963482956 0.871997603 0.931646448 0.942033163 1.167171369 0.792858315 1 19.41883767 -4.754721653 24.82642308 0.958946506 1.163894821 0.313292919 0.09241957 259.3754137 958468.6824 0.021961625 0.207644067 1.76E-05 4.754721653 0.204948314 GNVVPSPLPT(ph)RR ddPTM_A459_MK2206_30min_R1 1 GNVVPSPLPTRR 12 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 GNVVPS(0.071)PLPT(0.929)RR 125.47 0.003585 278530000 5536.5 5616.9 5092.4 4485.5 5480.7 4941.6 6034.6 5536.8 4084.7 3171.9 TRUE FALSE 5065.591602 5251.238789 4746.742076 4830.973987 5262.392113 5221.389122 5632.042845 5488.392341 4509.319182 3564.858919 1.420979544 1.473056553 1.331537148 1.355165547 1.476185239 1.464683243 1.579878187 1.539581921 1.264936225 1 11.79962927 -8.55751578 4.001814335 1.000416958 1.452324451 0.799207598 0.071085561 0.101376722 5.136751173 0.077275439 0.020248614 2.77E-09 8.55751578 0.451907494 GNVVPSPLPT(ph)RR ddPTM_A459_MK2206_30min_R2 2 GNVVPSPLPTRR 12 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 GNVVPS(0.195)PLPT(0.805)RR;GNVVPS(0.26)PLPT(0.74)RR 87.083 0.0362 12126000 27679 45962 48935 50710 42446 53041 43616 40143 42957 37679 TRUE FALSE 29798.12552 43679.59392 50566.46848 46566.83079 40779.35677 55059.51242 37889.16681 45389.82793 46693.32221 36449.53732 0.81751725 1.19835798 1.387300696 1.277569874 1.118789421 1.510568212 1.039496509 1.245278576 1.28104019 1 15.15361288 -4.769584282 4.624010031 1.244830164 0.787162167 0.41798438 0.145408236 0.168228852 8.285053257 0.034191776 0.252041387 1.70E-05 4.769584282 -0.457667997 GPAADPS(ph)SPGTSGVGPAAGAGDSR ddPTM_A459_MK2206_30min_R1 1 GPAADPSSPGTSGVGPAAGAGDSR 24 0 A0A0U1RRM4 A0A0U1RRM4 1 GPAADPS(0.926)S(0.073)PGT(0.001)SGVGPAAGAGDSR 227.66 1.51E-38 9788800 3196.9 2763.9 2763.9 2399.6 2975.9 2713.8 2931.1 2691.8 1983.2 2440.3 TRUE FALSE 2924.986867 2583.969608 2576.294169 2584.417608 2857.363601 2867.453011 2735.571667 2668.265876 2189.360737 2742.622787 1.066492585 0.942152752 0.939354176 0.9423161 1.041836163 1.045514908 0.997429059 0.972888393 0.798272641 1 11.4213405 -8.024411254 24.08761089 0.89461767 0.993099252 0.272671891 0.062433023 608.9861327 600906.623 0.041007659 0.015700619 9.45E-09 8.024411254 0.098481583 GPAADPS(ph)SPGTSGVGPAAGAGDSR ddPTM_A459_MK2206_30min_R2 2 GPAADPSSPGTSGVGPAAGAGDSR 24 0 A0A0U1RRM4 A0A0U1RRM4 1 GPAADPS(0.596)S(0.392)PGT(0.009)S(0.002)GVGPAAGAGDSR;GPAADPS(0.61)S(0.388)PGT(0.002)S(0.001)GVGPAAGAGDSR 244.33 3.22E-45 28023000 84032 104208 97127 107323 107617 107867 99218 83177 91035 98016 TRUE FALSE 90465.55453 99033.18225 100365.1657 98554.36759 103391.4158 111971.9543 86190.55742 94048.51949 98953.05975 94817.74595 0.9540994 1.044458305 1.058506134 1.039408463 1.090422629 1.180917698 0.909012934 0.991887316 1.043613289 1 16.53286948 -10.80098624 7.197983806 0.999999766 1.036811529 0.020687144 0.070295688 2.74E-07 2.75E-08 0.070527679 0.017105366 1.58E-11 10.80098624 0.036811763 GPAADPSS(ph)PGTSGVGPAAGAGDSR ddPTM_A459_MK2206_30min_R1 2 GPAADPSSPGTSGVGPAAGAGDSR 24 0 A0A0U1RRM4 A0A0U1RRM4 1 GPAADPS(0.053)S(0.946)PGT(0.001)SGVGPAAGAGDSR;GPAADPS(0.146)S(0.851)PGT(0.003)S(0.001)GVGPAAGAGDSR 307.25 4.52E-131 17497100 4219.9 4402.7 4260.9 3398.74 4329.9 3737.6 4428.2 3705 3381.41 3325.61 TRUE FALSE 3860.975345 4116.08343 3971.68198 3660.511544 4157.430914 3949.219682 4132.802858 3672.607576 3732.91967 3737.611674 1.033006016 1.10126032 1.062625635 0.979371819 1.112322862 1.056615836 1.105733612 0.982608119 0.998744652 1 11.86790097 -7.777875926 24.99367549 0.993007255 1.064038647 0.430907485 0.037193876 238.9407459 363331.7749 0.02009061 0.009693357 1.67E-08 7.777875926 0.071031392 GPAADPSS(ph)PGTSGVGPAAGAGDSR ddPTM_A459_MK2206_30min_R2 1 GPAADPSSPGTSGVGPAAGAGDSR 24 0 A0A0U1RRM4 A0A0U1RRM4 1 GPAADPS(0.323)S(0.673)PGT(0.003)S(0.001)GVGPAAGAGDSR 255.63 7.78E-101 0 19271 26509 15531 22335 21748 25545 21058 16378 22012 20201 TRUE FALSE 20746.40258 25192.60161 16048.79579 20510.15905 20894.06425 26517.13288 18293.0593 18518.66083 23926.56397 19541.84302 1.061640018 1.289162009 0.821252927 1.049550906 1.069196197 1.356941249 0.936096932 0.947641469 1.224376019 1 14.25427892 -10.88733839 3.224105662 0.999283992 1.080512202 0.024559936 0.15742082 114109787.3 182989605.3 801125.3366 0.039044642 1.30E-11 10.88733839 0.08122821 GPAFNMAS(ph)PESDFGINLK ddPTM_A459_MK2206_30min_R2 1 GPAFNMASPESDFGINLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GPAFNMAS(0.508)PES(0.492)DFGINLK 92.236 0.0050678 10899000 50991 56687 48726 62094 47902 44870 62714 41128 51292 57501 TRUE FALSE 54894.91017 53872.00601 50350.50052 57020.72157 46021.12679 46577.55929 54479.57647 46503.57081 55753.28545 55624.74708 0.986879277 0.968489905 0.905181653 1.025096285 0.827349861 0.837353188 0.97941257 0.836023052 1.002310813 1 15.76343925 -6.250310641 24.98799443 0.90500686 0.966472345 0.13643231 0.068562522 1391.416377 3124226.205 0.01963219 0.025103876 5.62E-07 6.250310641 0.061465484 GPAFNMASPES(ph)DFGINLK ddPTM_A459_MK2206_30min_R1 3 GPAFNMASPESDFGINLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GPAFNMAS(0.099)PES(0.901)DFGINLK;GPAFNMAS(0.034)PES(0.966)DFGINLK;GPAFNMAS(0.101)PES(0.899)DFGINLK 176.85 2.16E-09 78163000 11244 9837.6 9939.2 8183.2 8584.9 9351.4 9827.8 8854.2 8939.7 8394.6 TRUE FALSE 10287.63876 9197.170452 9264.554796 8813.471482 8242.945254 9880.868187 9172.205394 8776.788663 9869.013806 9434.586424 1.090417565 0.974835572 0.98197784 0.934166172 0.873694392 1.047302737 0.972189451 0.93027805 1.046046256 1 13.20374356 -10.52798316 14.93490639 1 0.97844612 0.00061983 0.060964804 0 0 0.058680142 0.014232025 2.96E-11 10.52798316 -0.02155388 GPAFNMASPES(ph)DFGINLK ddPTM_A459_MK2206_30min_R2 1 GPAFNMASPESDFGINLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GPAFNMAS(0.231)PES(0.769)DFGINLK 78.166 0.01316 9628100 46423 53487 51816 53433 52731 48053 55195 36238 46375 60712 TRUE FALSE 49977.18057 50830.91336 53543.51958 49067.35298 50660.51599 49881.69059 47947.8302 40974.43102 50408.61367 58730.97241 0.850951015 0.865487345 0.911674324 0.83545957 0.862586024 0.849325127 0.81639769 0.697663079 0.858296936 1 15.8418339 -7.073110571 3.36179024 0.818392889 0.865772361 0 0.072402557 0.679449537 14.88765051 0.028062311 0.02179486 8.45E-08 7.073110571 0.047379472 GPAGDATVAS(ph)EKESVM ddPTM_A459_MK2206_30min_R1 1 GPAGDATVASEKESVM 16 1 M0QXM4;Q15758-3;Q15758-2;Q15758 M0QXM4 SLC1A5 Amino acid transporter;Neutral amino acid transporter B(0) 1 GPAGDAT(0.004)VAS(0.962)EKES(0.033)VM 122.33 0.0069044 8324400 2583.9 2431.3 1781.1 1922.7 2064.5 1861.8 2737.4 3140.5 3322.2 2351 TRUE FALSE 2364.125736 2273.021928 1660.203894 2070.786687 1982.266593 1967.213507 2554.793041 3113.04294 3667.554579 2642.259629 0.89473635 0.860256843 0.628327314 0.783718097 0.750216433 0.744519382 0.96689705 1.178174508 1.38803717 1 11.36755652 -7.587067154 2.597129764 1.219103117 0.773845047 0.733563567 0.110921475 0.136227084 1.849767549 0.061617706 0.031906614 2.59E-08 7.587067154 -0.445258069 GPAGDATVASEKES(ph)VM ddPTM_A459_MK2206_30min_R1 1 GPAGDATVASEKESVM 16 1 M0QXM4;Q15758-3;Q15758-2;Q15758 M0QXM4 SLC1A5 Amino acid transporter;Neutral amino acid transporter B(0) 1 GPAGDATVAS(0.175)EKES(0.825)VM 127.05 0.0050805 4805000 1280.7 1070.8 1162.9 1371.5 1348.9 1028.5 1436.9 1377.9 1425 1356.6 TRUE FALSE 1171.76974 1001.090725 1083.965588 1477.133168 1295.170457 1086.732781 1341.047023 1365.853166 1573.133849 1524.66585 0.768541999 0.656596805 0.710952887 0.968824197 0.849478236 0.712767838 0.879567823 0.895837711 1.03178926 1 10.57427738 -6.641038816 0.260339491 1.040646582 0.624077385 0.526054209 0.085649823 3.043714944 0.419957672 0.160842914 0.418510228 2.29E-07 6.641038816 -0.416569196 GPAGEAGAS(ph)PPVR ddPTM_A459_MK2206_30min_R2 2 GPAGEAGASPPVR 13 0 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 1 GPAGEAGAS(1)PPVR;GPAGEAGAS(1)PPVR 80.371 0.037207 143632000 188218 191936 213067 224485 178344 166823 232907 183650 168910 206070 TRUE FALSE 202628.1148 182404.7373 220170.5474 206143.8574 171341.3185 173171.5662 202326.0311 207653.6856 183601.4865 199345.9528 1.016464653 0.915016005 1.104464597 1.034101042 0.859517417 0.868698681 1.014949279 1.041674951 0.921019383 1 17.60491479 GPAPAPQQCS(ph)EPETK ddPTM_A459_MK2206_30min_R1 1 GPAPAPQQCSEPETK 15 0 Q3YEC7;Q3YEC7-2;G3V154 Q3YEC7 RABL6 Rab-like protein 6 1 GPAPAPQQCS(0.817)EPET(0.183)K 135.23 0.00041055 12270000 5946.6 7274.3 5757.5 5033.2 5059.6 4889.3 6196.2 5572.7 6169.5 5437.6 TRUE FALSE 5440.810443 6800.741748 5366.696941 5420.857936 4858.065418 5166.127941 5782.862804 5523.978471 6810.841603 6111.25094 0.890294065 1.112823187 0.878166679 0.887029184 0.79493797 0.845347048 0.946264989 0.903903068 1.114475853 1 12.57725201 -8.247921094 23.91763127 1.057237918 0.90802891 0.344684237 0.082666756 458.1039897 810520.2833 0.059947288 0.022345855 5.65E-09 8.247921094 -0.149209009 GPAPAPQQCSEPET(ph)K ddPTM_A459_MK2206_30min_R2 1 GPAPAPQQCSEPETK 15 0 Q3YEC7;Q3YEC7-2;G3V154 Q3YEC7 RABL6 Rab-like protein 6 1 GPAPAPQQCS(0.064)EPET(0.936)K 167.92 0.00016274 52451000 17921 18853 22005 20395 18846 14030 24212 17876 15846 21103 TRUE FALSE 19293.04554 17916.78743 22738.63572 18728.66326 18106.01135 14563.92148 21032.93532 20212.45458 17224.25644 20414.41084 0.945069916 0.877653907 1.113852165 0.917423648 0.886923041 0.713413754 1.030298424 0.990107172 0.843730273 1 14.31730031 -3.694343348 0.001292467 1.329286336 0.527296645 0.001008959 0.105622223 29537529.27 4119.820306 1260908.241 1295678.649 0.000202142 3.694343348 -0.801989691 GPAPGPPPAGSALGGAPPVPS(ph)RPGASPDPFGPPPQVPSRPNR ddPTM_A459_MK2206_30min_R1 1 GPAPGPPPAGSALGGAPPVPSRPGASPDPFGPPPQVPSRPNR 42 2 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 1 GPAPGPPPAGS(0.003)ALGGAPPVPS(0.767)RPGAS(0.226)PDPFGPPPQVPS(0.004)RPNR 75.114 3.35E-09 26905000 1898.3 1853.6 1787.9 1490.9 1903.2 1652.6 1697.8 1773 1426.5 1250.5 TRUE FALSE 1736.839617 1732.930303 1666.542329 1605.729376 1827.391514 1746.168784 1584.54286 1757.498848 1574.78978 1405.421381 1.235814141 1.233032546 1.185795486 1.142525223 1.300244566 1.242452127 1.127450373 1.250513812 1.12051076 1 10.45678704 -8.552917421 3.534279354 1.00018353 1.212495309 0.653056794 0.049016237 0.139965868 4.988733375 0.04763552 0.012560086 2.80E-09 8.552917421 0.212311779 GPAPGPPPAGSALGGAPPVPS(ph)RPGASPDPFGPPPQVPSRPNR ddPTM_A459_MK2206_30min_R2 2 GPAPGPPPAGSALGGAPPVPSRPGASPDPFGPPPQVPSRPNR 42 2 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 1 GPAPGPPPAGS(0.025)ALGGAPPVPS(0.767)RPGAS(0.192)PDPFGPPPQVPS(0.016)RPNR;GPAPGPPPAGSALGGAPPVPS(0.828)RPGAS(0.164)PDPFGPPPQVPS(0.008)RPNR 82.554 6.26E-10 27832000 35577 37073 33128 44723 38290 40525 39721 28982 33990 32769 TRUE FALSE 38300.80247 35232.00873 34232.47099 41068.98784 36786.54221 42067.20727 34505.58499 32770.04691 36946.38876 31699.75021 1.208236728 1.111428591 1.079897184 1.295561875 1.160467889 1.327051696 1.088512835 1.033763569 1.165510407 1 14.95218385 -7.490855973 24.91391598 1.072009793 1.192118845 0.368413362 0.080413973 724.9949908 564051.9108 0.033854842 0.022802368 3.23E-08 7.490855973 0.120109052 GPAPGPPPAGSALGGAPPVPSRPGAS(ph)PDPFGPPPQVPSRPNR ddPTM_A459_MK2206_30min_R1 1 GPAPGPPPAGSALGGAPPVPSRPGASPDPFGPPPQVPSRPNR 42 2 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 1 GPAPGPPPAGSALGGAPPVPS(0.264)RPGAS(0.73)PDPFGPPPQVPS(0.006)RPNR 65.269 5.95E-08 33931000 1485.3 1724.1 1501.9 1134.1 1583.3 1303.6 1249.2 1136.7 1259.6 1216.5 TRUE FALSE 1358.967435 1611.860777 1399.955213 1221.448579 1520.233808 1377.408705 1165.868147 1126.761952 1390.539928 1367.209204 0.993971831 1.178942309 1.023950986 0.893388206 1.111924791 1.007460088 0.852735736 0.824132802 1.017064487 1 10.4170183 -7.09339688 5.809764442 0.909838731 1.040963608 0.27542075 0.088689269 0.285663077 14.31868705 0.034591331 0.026809704 8.06E-08 7.09339688 0.131124877 GPAS(ph)PLEAK ddPTM_A459_MK2206_30min_R2 2 GPASPLEAK 9 0 Q13099-3;Q13099;Q13099-1 Q13099-3 IFT88 Intraflagellar transport protein 88 homolog 1 GPAS(1)PLEAK;GPAS(1)PLEAK 85.958 0.034482 16385900 129723 154237 116572 105950 108783 102059 117092 84172 82088 98412 TRUE FALSE 139654.6926 146577.8149 120458.4523 97293.54608 104511.6328 105942.9268 101717.6797 95173.56941 89227.86586 95200.8245 1.466948352 1.539669595 1.265308919 1.021982179 1.097801761 1.112836231 1.068453769 0.999713709 0.937259381 1 16.53868645 -5.514512985 2.705356203 1.040492232 1.504655656 0.924484969 0.05378458 0.071104119 1.036466061 0.016495148 0.037145776 3.06E-06 5.514512985 0.464163424 GPAS(ph)PTRPAAPRPAEAPLLDL ddPTM_A459_MK2206_30min_R1 1 GPASPTRPAAPRPAEAPLLDL 21 2 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 GPAS(0.573)PT(0.427)RPAAPRPAEAPLLDL 55.536 0.036451 13895000 2210.7 2007.4 2141.9 1870.6 2382 1933.9 2394.7 2168 1579.1 1410.7 TRUE FALSE 2022.668356 1876.717895 1996.513796 2014.673936 2287.119896 2043.395747 2234.953932 2149.045405 1743.253096 1585.468166 1.275754631 1.183699512 1.259258204 1.270712323 1.442551762 1.288827988 1.4096492 1.355464241 1.099519456 1 10.6306932 -8.417755266 3.827527809 1.003763262 1.309944576 0.684492825 0.072191612 0.133178473 3.312304316 0.076015991 0.020046572 3.82E-09 8.417755266 0.306181315 GPAS(ph)TPTYSPAPTQPAPR ddPTM_A459_MK2206_30min_R1 1 GPASTPTYSPAPTQPAPR 18 0 Q6P1N0;Q6P1N0-2;K7EJY5 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 GPAS(0.467)T(0.467)PT(0.065)YS(0.001)PAPTQPAPR 195.5 2.85E-10 6107400 1992.2 1643.3 1734.4 1598.9 2155.9 1728.2 2283 2383.4 1974.1 1497.1 TRUE FALSE 1822.752929 1536.320871 1616.67376 1722.047555 2070.025938 1826.049191 2130.705236 2362.562185 2179.314759 1682.572051 1.083313447 0.913078801 0.960834789 1.023461405 1.230274767 1.085272509 1.266338184 1.404137305 1.295228195 1 10.71645257 -6.397998921 1.223675903 1.257631637 0.971503413 0.443805021 0.115308128 0.377367087 1.168998312 0.049204655 0.062560206 4.00E-07 6.397998921 -0.286128224 GPASQFYITPSTSLS(ph)PR ddPTM_A459_MK2206_30min_R1 2 GPASQFYITPSTSLSPR 17 0 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 GPASQFYITPSTS(0.001)LS(0.999)PR;GPASQFYITPSTSLS(1)PR 205.15 1.19E-08 121033000 7702.1 7780.9 8096.9 6605.8 7682.5 6795 8613.7 7651.4 7068.8 7139 TRUE FALSE 7046.99595 7274.361996 7547.304987 7114.579861 7376.489757 7179.727028 8039.09579 7584.504616 7803.627056 8023.433217 0.878301814 0.906639564 0.940657794 0.88672513 0.91936825 0.894844742 1.001952104 0.945294167 0.972604476 1 12.97000398 -7.253613369 24.97204159 0.975403868 0.906045572 0.736332576 0.022064717 317.8127232 1014112.303 0.008354718 0.006343322 5.58E-08 7.253613369 -0.069358296 GPASQFYITPSTSLS(ph)PR ddPTM_A459_MK2206_30min_R2 4 GPASQFYITPSTSLSPR 17 0 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 GPASQFYITPSTSLS(1)PR;GPASQFYITPSTSLS(1)PR;GPASQFYITPSTS(0.002)LS(0.998)PR;GPASQFYITPSTSLS(1)PR 190.8 6.24E-08 94550000 275666 322860 289885 352033 361504 334798 359864 292898 296581 359053 TRUE FALSE 296771.2009 306827.2419 299549.6212 323270.7778 347309.5365 347538.9725 312613.4245 331180.7743 322377.0793 347337.13 0.854418302 0.883370119 0.862417505 0.930711835 0.999920557 1.000581114 0.900028812 0.953485089 0.928138835 1 18.40597712 -5.885470955 4.002529037 0.960455492 0.868420971 0.64989403 0.03167744 0.149398311 4.39826111 0.009558694 0.014765363 1.30E-06 5.885470955 -0.092034521 GPASTPTYS(ph)PAPTQPAPR ddPTM_A459_MK2206_30min_R2 1 GPASTPTYSPAPTQPAPR 18 0 Q6P1N0;Q6P1N0-2;K7EJY5 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 GPAS(0.009)T(0.04)PT(0.391)Y(0.001)S(0.558)PAPTQPAPR 120.59 0.0009501 6906400 31137 27125 26534 30257 26820 24239 27335 22978 25643 24890 TRUE FALSE 33520.87266 25778.01194 27418.63032 27784.90631 25766.91204 25161.43213 23745.88166 25981.3035 27873.38179 24077.84134 1.392187621 1.070611422 1.138749522 1.153961683 1.070150421 1.045003652 0.986213063 1.079054519 1.157636243 1 14.55541843 -2.703306061 1.537470906 1.075660474 199.9558702 0.715536753 0.058522697 483.9439161 2.361666527 0.01686782 338304.2425 0.001980131 2.703306061 198.8802097 GPCAPAAS(ph)SPTQK ddPTM_A459_MK2206_30min_R1 1 GPCAPAASSPTQK 13 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 GPCAPAAS(0.489)S(0.489)PT(0.021)QK 97.957 0.012947 3990800 2820.7 3597.9 3695.3 2785.9 2842.7 2590.5 3262.9 3242.3 2686.8 3373.7 TRUE FALSE 2580.784653 3363.676056 3444.473332 3000.470501 2729.469239 2737.171871 3045.237894 3213.952913 2966.102475 3791.659426 0.680647802 0.887125049 0.908434262 0.79133439 0.719861394 0.721892861 0.803141198 0.847637552 0.782270278 1 11.88861367 -10.14685454 0.830143665 1.014693555 0.795793528 0.440622843 0.069664224 29.51792261 12.5341734 1.414747059 0.024525947 7.13E-11 10.14685454 -0.218900027 GPCAPAAS(ph)SPTQK ddPTM_A459_MK2206_30min_R2 1 GPCAPAASSPTQK 13 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 GPCAPAAS(0.8)S(0.193)PT(0.007)QK 160.52 2.15E-05 0 25045 27596 24219 25869 27564 26745 33434 27255 21270 29394 TRUE FALSE 26962.46446 26225.62277 25026.44937 23755.41995 26481.69886 27762.79972 29044.07564 30817.32208 23120.02615 28434.87619 0.948218106 0.922304799 0.880132173 0.835432509 0.931310504 0.976364361 1.021424375 1.083786048 0.813086929 1 14.7953739 -6.658577286 3.514718802 0.987387628 0.895999023 0.232526956 0.069696683 0.328201148 7.891030344 0.024139241 0.023809493 2.19E-07 6.658577286 -0.091388605 GPCAPAASS(ph)PTQK ddPTM_A459_MK2206_30min_R2 2 GPCAPAASSPTQK 13 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 GPCAPAAS(0.115)S(0.879)PT(0.006)QK;GPCAPAAS(0.268)S(0.54)PT(0.193)QK 171.32 7.16E-08 0 67209 65470 59560 68728 64133 48768 79015 50213 47771 67942 TRUE FALSE 72354.57271 62218.855 61545.70067 63112.70255 61614.81618 50623.90041 68640.23559 56776.01151 51926.03523 65725.0581 1.100867383 0.94665348 0.936411506 0.960253279 0.937463092 0.770237439 1.044354126 0.863841176 0.790049286 1 16.00415589 -1.522878852 0.776688497 0.901256587 41.43867328 0.324846962 0.081216395 519.122162 2.000467627 0.029047541 36936.60608 0.029999993 1.522878852 40.5374167 GPDEAMEDGEEGS(ph)DDEAEWVVTK ddPTM_A459_MK2206_30min_R1 2 GPDEAMEDGEEGSDDEAEWVVTK 23 0 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 GPDEAMEDGEEGS(1)DDEAEWVVTK;GPDEAMEDGEEGS(1)DDEAEWVVTK 151.47 3.97E-08 22236000 10949.6 11968.7 11667.5 9329.1 11503.6 11053.5 11770 10189.4 10970 10857.8 TRUE FALSE 10018.27902 11189.53545 10875.54261 10047.6289 11045.38725 11679.33962 10984.84478 10100.31515 12110.37076 12202.94624 0.820972151 0.916953598 0.891222693 0.823377298 0.905141024 0.957091787 0.900179724 0.8276948 0.992413678 1 13.57494189 -14.52287874 0.104586696 1.369425408 0.820363716 0.395479183 0.048811455 200.3467686 1.405716199 15.74645243 0.725284966 3.00E-15 14.52287874 -0.549061692 GPDEAMEDGEEGS(ph)DDEAEWVVTK ddPTM_A459_MK2206_30min_R2 1 GPDEAMEDGEEGSDDEAEWVVTK 23 0 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 GPDEAMEDGEEGS(0.986)DDEAEWVVT(0.014)K 62.108 0.015128 2457800 17471 18632 17411 20252 18749 17917 20796 12703 16200 21751 TRUE FALSE 18808.59319 17706.76197 17991.47405 18597.34682 18012.82005 18598.84399 18065.46022 14363.32572 17609.04672 21041.26665 0.893890729 0.841525478 0.855056606 0.883851107 0.856071089 0.883922261 0.858572847 0.682626477 0.836881496 1 14.36093393 -7.552154832 24.99940135 0.809972358 0.867581404 0 0.074326144 460.9830229 393636.9004 0.032654865 0.018853618 2.80E-08 7.552154832 0.057609046 GPEEEEIGSPEPMAAPASASQKLS(ph)PLQK ddPTM_A459_MK2206_30min_R1 1 GPEEEEIGSPEPMAAPASASQKLSPLQK 28 1 H3BRB3;Q14807-2;Q14807 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 GPEEEEIGSPEPMAAPAS(0.035)AS(0.048)QKLS(0.917)PLQK 106.37 6.17E-10 5567100 471.68 451.14 388.03 416.14 449.22 506.01 356.16 480.84 523.81 256.53 TRUE FALSE 431.5611391 421.770704 361.6916047 448.1911749 431.3266162 534.6598489 332.4012163 476.6360666 578.261924 288.3108731 1.496860436 1.462902524 1.254519473 1.554541354 1.496046998 1.854456071 1.152926397 1.653201842 2.005688921 1 8.171481436 -5.899612477 23.51920854 1.554519237 1.409554916 0.035151224 0.284595586 27.37566105 6369.155945 0.07787938 0.115514138 1.26E-06 5.899612477 -0.14496432 GPEENYSRPEAPNEFYDGDHDNDKES(ph)DVEI ddPTM_A459_MK2206_30min_R2 2 GPEENYSRPEAPNEFYDGDHDNDKESDVEI 30 2 O15379;O15379-2 O15379 HDAC3 Histone deacetylase 3 1 GPEENYS(0.001)RPEAPNEFY(0.002)DGDHDNDKES(0.997)DVEI;GPEENYSRPEAPNEFY(0.011)DGDHDNDKES(0.988)DVEI 42.708 0.021597 8780100 21979 15767.9 18107.5 15973.8 14103.1 11151.9 19649.4 15646 13118.2 26296 TRUE FALSE 23661.72914 14984.88901 18711.19501 14668.68944 13549.34143 11576.29337 17069.41018 17690.98592 14259.19732 25437.96367 0.930173871 0.589075808 0.735561826 0.576645585 0.532642534 0.455079405 0.671021093 0.695456057 0.560547908 1 14.63469557 -12.33386906 16.06735636 0.991390096 0.652613704 0 0.16687384 0 0 0 0.036427371 4.64E-13 12.33386906 -0.338776392 GPESESEDHR ddPTM_A459_MK2206_30min_R1 1 GPESESEDHR 10 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 0 155.06 0.0015318 0 614.72 351.12 287.2 394.31 249.84 362.38 608.6 632.09 94.793 259.14 FALSE TRUE 562.434836 328.2620242 267.7056642 424.6798245 239.8883438 382.8976424 568.0014045 626.5637038 104.6470716 291.2442196 1.93114506 1.127102281 0.919179322 1.458157093 0.823667313 1.31469611 1.950258121 2.151334384 0.359310381 1 8.186085606 -4.753110629 24.74724239 1.279012727 1.931146445 0.142239076 0.502839779 614.7454793 1826434.024 0.126986312 1.401861254 1.77E-05 4.753110629 0.652133718 GPESESEDHR ddPTM_A459_MK2206_30min_R2 1 GPESESEDHR 10 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 0 181.87 0.00019985 6985100 68392 70812 61319 82004 90000 92291 90939 89716 98231 75309 FALSE TRUE 73628.1441 67295.57905 63363.34486 75304.01088 86466.14779 95803.19868 78998.60006 101442.1892 106774.9548 72851.6735 1.01065824 0.923734155 0.869758261 1.03366206 1.186879362 1.315044584 1.084375914 1.392448304 1.465648621 1 16.15267449 -6.236389141 2.30350023 1.265470494 0.934141325 0.530483772 0.132116475 0.232136899 2.421403969 0.043827648 0.057048718 5.80E-07 6.236389141 -0.331329169 GPGAPAAS(ph)SPTQK ddPTM_A459_MK2206_30min_R1 2 GPGAPAASSPTQK 13 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 GPGAPAAS(0.404)S(0.404)PT(0.192)QK;GPGAPAAS(0.493)S(0.493)PT(0.014)QK 155.88 0.00036541 12102800 10731.5 10772.7 10229.5 7972.7 8794.9 7895.5 9061.9 9272.3 8992.7 9550 TRUE FALSE 9818.729572 10071.39527 9535.150041 8586.758735 8444.580509 8342.536387 8457.397185 9191.233259 9927.523346 10733.1261 0.914806132 0.938346869 0.888385169 0.800024024 0.78677735 0.77726995 0.787971473 0.856342614 0.924942394 1 13.38978271 -10.97242227 8.220735288 1.000004512 0.848815158 0.357331665 0.059024127 5.57E-06 3.73E-07 0.065164997 0.015804362 1.07E-11 10.97242227 -0.151189354 GPGAPAAS(ph)SPTQK ddPTM_A459_MK2206_30min_R2 2 GPGAPAASSPTQK 13 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 GPGAPAAS(0.474)S(0.474)PT(0.052)QK;GPGAPAAS(0.685)S(0.244)PT(0.071)QK 151.16 0.00047295 17784800 115935 104803 85079 100918 94763 76271 115553 81832 65518 109629 TRUE FALSE 124811.0727 99598.63542 87915.4914 92672.67658 91042.12847 79173.54635 100380.7523 92527.72337 71216.63721 106051.8147 1.176887666 0.939150694 0.828986205 0.873843383 0.85846837 0.746555319 0.94652555 0.872476568 0.671526814 1 16.69440978 -4.761346652 2.287539404 0.846024931 1.270879563 0.560149071 0.087379764 0.458955856 2.73765024 0.02198002 0.406382459 1.73E-05 4.761346652 0.424854632 GPGAPAASSPT(ph)QK ddPTM_A459_MK2206_30min_R2 1 GPGAPAASSPTQK 13 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 GPGAPAAS(0.179)S(0.179)PT(0.642)QK 100.09 0.026228 5671700 34526 27455 26284 27605 27807 21379 31693 25127 19116 33033 TRUE FALSE 37169.33711 26091.62462 27160.29544 25349.5832 26715.15746 22192.59283 27531.67103 28411.18517 20778.67513 31955.13592 1.163172556 0.816508016 0.849950866 0.793286665 0.836020774 0.694492206 0.861572647 0.889096052 0.650245243 1 14.9637602 -4.761422604 10.50397323 0.815492655 1.164257756 0.550627386 0.092538362 0.048690454 144.1378161 0.021341006 0.120319171 1.73E-05 4.761422604 0.348765101 GPGAPGLAHLQESQAGS(ph)DTDVEEGKAPQAVPLEK ddPTM_A459_MK2206_30min_R1 2 GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK 34 1 Q14676-3;Q14676;Q14676-2;Q14676-4 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 GPGAPGLAHLQES(0.011)QAGS(0.585)DT(0.404)DVEEGKAPQAVPLEK;GPGAPGLAHLQES(0.022)QAGS(0.932)DT(0.045)DVEEGKAPQAVPLEK 105.58 2.75E-14 37563000 6623.3 6905 6626.3 6819.8 5419.3 5505.5 5970.5 5691.5 5903.6 4599.3 TRUE FALSE 6059.953555 6455.483245 6176.525218 7345.062178 5203.437805 5817.216652 5572.218839 5641.739816 6517.300346 5169.096007 1.172343007 1.248861162 1.19489466 1.420956811 1.006643676 1.125383751 1.077987105 1.091436454 1.260820139 1 12.33569628 -6.279689507 24.99924514 1.099081039 1.253923075 0.43873236 0.091532543 819.5778097 1122664.848 0.027704401 0.031472548 5.25E-07 6.279689507 0.154842036 GPGAPGLAHLQESQAGS(ph)DTDVEEGKAPQAVPLEK ddPTM_A459_MK2206_30min_R2 2 GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK 34 1 Q14676-3;Q14676;Q14676-2;Q14676-4 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 GPGAPGLAHLQES(0.018)QAGS(0.552)DT(0.431)DVEEGKAPQAVPLEK;GPGAPGLAHLQES(0.084)QAGS(0.685)DT(0.231)DVEEGKAPQAVPLEK 60.379 0.00021776 50097000 132873 144603 121406 170551 158756 112139 199868 171168 111975 151204 TRUE FALSE 143045.859 137422.2253 125453.6154 156616.4377 152522.4418 116406.5282 173625.0915 193540.2453 121714.3831 146270.2259 0.977956096 0.939509216 0.857683884 1.070733547 1.042744283 0.795832013 1.187015953 1.323169115 0.832120019 1 17.15827661 -7.281500755 24.79757265 1.112507029 0.952911259 0.177729916 0.140607929 1145.138198 1415482.219 0.057798334 0.039024767 5.23E-08 7.281500755 -0.15959577 GPGAPGLAHLQESQAGSDT(ph)DVEEGKAPQAVPLEK ddPTM_A459_MK2206_30min_R2 1 GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK 34 1 Q14676-3;Q14676;Q14676-2;Q14676-4 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 GPGAPGLAHLQES(0.016)QAGS(0.308)DT(0.676)DVEEGKAPQAVPLEK 49.608 0.0058656 8466700 20088 22218 23808 28228 19909 17066 31427 30704 14098 26273 TRUE FALSE 21625.95273 21114.68643 24601.74684 25921.6821 19127.27263 17715.45859 27300.59715 34717.11822 15324.21856 25415.71416 0.850889044 0.830772895 0.967973856 1.019907681 0.752576634 0.697027771 1.07416211 1.365970596 0.60294267 1 14.63343315 -7.29352927 24.64203828 1.041266432 0.860394267 0.128554066 0.194073315 1054.289132 809590.9763 0.080229409 0.054096259 5.09E-08 7.29352927 -0.180872165 GPGDLMGPQGLS(ph)PEEMAR ddPTM_A459_MK2206_30min_R1 2 GPGDLMGPQGLSPEEMAR 18 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 GPGDLMGPQGLS(1)PEEMAR;GPGDLMGPQGLS(1)PEEMAR 229.22 8.98E-19 36411000 4932.1 4988.5 4670.7 3768 4794.9 4804.6 4902 4100.2 4456.5 4161.4 TRUE FALSE 4512.598996 4663.747743 4353.665897 4058.212013 4603.90898 5076.6323 4574.996524 4064.352384 4919.769123 4676.945649 0.96486026 0.997178093 0.930878018 0.867705618 0.984383682 1.085458904 0.978201773 0.86901852 1.051919242 1 12.19135095 -6.494356356 24.79117301 0.992825464 0.941375707 0.163674731 0.060720202 1403.956653 1220296.399 0.019959402 0.022584818 3.20E-07 6.494356356 -0.051449756 GPGDLMGPQGLS(ph)PEEMAR ddPTM_A459_MK2206_30min_R2 4 GPGDLMGPQGLSPEEMAR 18 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 GPGDLMGPQGLS(1)PEEMAR;GPGDLMGPQGLS(1)PEEMAR;GPGDLMGPQGLS(1)PEEMAR;GPGDLMGPQGLS(1)PEEMAR 198.98 1.99E-10 21495200 62556 73534 62622 75985 73465 67518.8 81801 55049.5 63473.1 66776 TRUE FALSE 67345.33546 69882.40849 64709.78623 69776.78244 70580.39497 70088.27525 71060.43044 62244.65866 68993.8755 64597.10459 1.04254418 1.081819517 1.001744376 1.080184366 1.092624746 1.085006452 1.100055968 0.963582796 1.06806452 1 15.97918188 -7.75063829 24.99992425 1.011867733 1.068973777 0.357935432 0.035947032 231.4674883 535751.7968 0.016952928 0.009661814 1.78E-08 7.75063829 0.057106044 GPGEPDS(ph)PTPLHPPTPPILSTDR ddPTM_A459_MK2206_30min_R1 1 GPGEPDSPTPLHPPTPPILSTDR 23 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 GPGEPDS(0.693)PT(0.306)PLHPPTPPILSTDR 53.209 0.017359 5754400 985.47 1023.8 962.06 621.73 975.78 1029.2 1006 1072.1 801.66 695.06 TRUE FALSE 901.6506016 957.1504339 896.7580477 669.6157523 936.9126164 1087.472415 938.8915756 1062.726743 884.9954258 781.1692802 1.154232027 1.225279153 1.147968911 0.85719673 1.19937207 1.392108525 1.201905399 1.360430792 1.132911199 1 9.609491406 -6.50928428 24.96001456 1.245326926 1.098990459 0.136525581 0.137610074 1045.011545 1918689.977 0.043261938 0.046983578 3.10E-07 6.50928428 -0.146336467 GPGEPDS(ph)PTPLHPPTPPILSTDR ddPTM_A459_MK2206_30min_R2 1 GPGEPDSPTPLHPPTPPILSTDR 23 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 GPGEPDS(0.55)PT(0.45)PLHPPTPPILSTDR 52.824 0.019028 4219100 9681.4 12695 7313.9 11674 13435 11389 11304 9705.4 7665.7 13668 TRUE FALSE 10422.61543 12064.58476 7557.741776 10720.19686 12907.47439 11822.41638 9819.771221 10973.9291 8332.44873 13222.01428 0.788277429 0.912461937 0.571602905 0.810783942 0.976210895 0.894146393 0.742683453 0.829974077 0.630195109 1 13.69065436 -5.989987284 24.99879687 0.839701317 0.759322997 0.087325005 0.126579407 611.4996374 1526718.557 0.036123796 0.053516969 1.02E-06 5.989987284 -0.08037832 GPGGS(ph)PGGLQK ddPTM_A459_MK2206_30min_R1 4 GPGGSPGGLQK 11 0 Q96A00-2;Q96A00;K7EJB8;K7EMN0 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 GPGGS(1)PGGLQK;GPGGS(1)PGGLQK;GPGGS(1)PGGLQK;GPGGS(1)PGGLQK 142.89 0.00088397 1125890000 41928.1 38522.2 37124.9 31988.1 35822.7 32644.8 42589.1 37167.7 36720.2 34589.5 TRUE FALSE 38361.89492 36014.39778 34604.96522 34451.829 34395.806 34493.12036 39748.05885 36842.74672 40537.39619 38874.7084 0.986808558 0.926422326 0.890166554 0.886227329 0.884786212 0.887289495 1.022465775 0.947730497 1.042770425 1 15.24654423 -7.260286672 24.99992318 0.998885884 0.907850173 0.605947234 0.036625508 76.06721095 1649772.291 0.014964861 0.010920488 5.49E-08 7.260286672 -0.091035711 GPGGS(ph)PGGLQK ddPTM_A459_MK2206_30min_R2 3 GPGGSPGGLQK 11 0 Q96A00-2;Q96A00;K7EJB8;K7EMN0 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 GPGGS(1)PGGLQK;GPGGS(1)PGGLQK;GPGGS(1)PGGLQK 124.39 0.0035881 1570461000 584373 662497 631565 652882 625656 617213 673307 601166 556903 708635 TRUE FALSE 629113.0462 629598.3623 652621.0619 599539.4521 601089.6018 640701.4732 584900.9821 679740.4603 605341.4163 685512.298 0.917726856 0.918434818 0.952019481 0.874585991 0.876847291 0.934631625 0.853231932 0.991580257 0.883049681 1 19.38682302 -10.25121807 0.5674291 1.016988726 0.909799329 0.307526241 0.039488241 18.73658376 4.23072009 0.633027456 0.016187395 5.61E-11 10.25121807 -0.107189397 GPGGS(ph)QGSQGPSPQGAR ddPTM_A459_MK2206_30min_R1 1 GPGGSQGSQGPSPQGAR 17 0 Q96MG7 Q96MG7 NDNL2 Melanoma-associated antigen G1 1 GPGGS(0.724)QGS(0.021)QGPS(0.255)PQGAR 80.316 0.016717 1142600 399.1 244.89 111.71 241.74 578.59 477.89 476.49 420.34 363.32 485.41 TRUE FALSE 365.1544492 228.9476165 104.1274364 260.3588567 555.5435351 504.9477188 444.7042215 416.6650117 401.0884142 545.5462555 0.669337285 0.419666736 0.190868209 0.477244329 1.018325265 0.925581862 0.815154017 0.76375744 0.735205146 1 9.091557714 -6.169281502 5.973153194 0.863049831 0.413594243 0.704223795 0.138562235 0.136431843 7.202554508 0.043269069 0.056170623 6.77E-07 6.169281502 -0.449455588 GPGGSQGSQGPS(ph)PQGAR ddPTM_A459_MK2206_30min_R1 5 GPGGSQGSQGPSPQGAR 17 0 Q96MG7 Q96MG7 NDNL2 Melanoma-associated antigen G1 1 GPGGSQGSQGPS(1)PQGAR;GPGGSQGS(0.001)QGPS(0.999)PQGAR;GPGGSQGSQGPS(1)PQGAR;GPGGS(0.002)QGS(0.03)QGPS(0.968)PQGAR;GPGGSQGSQGPS(1)PQGAR 255.72 1.77E-31 84855100 5656.14 5621.97 5175.33 4493.47 5792.11 4896.5 5953.16 5411.61 4718.61 4178.22 TRUE FALSE 5175.055591 5255.978731 4824.043019 4839.557838 5561.397994 5173.735599 5556.035559 5364.296864 5209.126395 4695.849438 1.102048875 1.119281783 1.027299338 1.030603281 1.184322042 1.101767778 1.18318009 1.142348565 1.10930439 1 12.19717044 -6.252361138 24.98397109 1.129503252 1.070305785 0.152729163 0.05552636 1039.484765 2860736.094 0.016060705 0.020429358 5.59E-07 6.252361138 -0.059197467 GPGGSQGSQGPS(ph)PQGAR ddPTM_A459_MK2206_30min_R2 6 GPGGSQGSQGPSPQGAR 17 0 Q96MG7 Q96MG7 NDNL2 Melanoma-associated antigen G1 1 GPGGSQGSQGPS(1)PQGAR;GPGGSQGSQGPS(1)PQGAR;GPGGS(0.004)QGS(0.03)QGPS(0.966)PQGAR;GPGGSQGSQGPS(1)PQGAR;GPGGS(0.001)QGS(0.084)QGPS(0.916)PQGAR;GPGGSQGSQGPS(1)PQGAR 205.98 6.20E-09 139155400 33326.3 29597.7 28748 31617.5 27294.5 35972.9 34488.6 61804.2 34434.4 36263.7 TRUE FALSE 35877.78715 28127.92126 29706.44397 29034.24911 26222.78079 37341.87392 29960.20539 69882.22115 37429.44187 35080.41844 1.022729738 0.801812593 0.846809853 0.827648312 0.747504789 1.064464895 0.854043558 1.992057799 1.066961101 1 15.09837834 GPGGSQGSQGPS(ph)PQGARR ddPTM_A459_MK2206_30min_R1 2 GPGGSQGSQGPSPQGARR 18 1 Q96MG7 Q96MG7 NDNL2 Melanoma-associated antigen G1 1 GPGGS(0.001)QGS(0.052)QGPS(0.946)PQGARR;GPGGSQGS(0.019)QGPS(0.981)PQGARR 71.735 0.010865 2181520 806.4 553.22 617.98 551.99 789.68 496.57 595.79 668.5 312.85 533.548 TRUE FALSE 737.8114454 517.2052774 576.0332394 594.5043654 758.2253734 524.6853643 556.0459362 662.655375 345.371877 599.6479543 1.230407675 0.86251487 0.960619035 0.991422319 1.264450863 0.874989001 0.927287306 1.105074019 0.575957734 1 9.227971951 -8.240306474 24.98468079 0.787978757 1.01771929 0.258616871 0.161319527 933.9265751 1104152.072 0.104159575 0.039281467 5.75E-09 8.240306474 0.229740533 GPGLLES(ph)PSIFNFTADR ddPTM_A459_MK2206_30min_R2 2 GPGLLESPSIFNFTADR 17 0 Q92615 Q92615 LARP4B La-related protein 4B 1 GPGLLES(0.5)PS(0.5)IFNFTADR;GPGLLES(0.665)PS(0.335)IFNFTADR 163.41 1.11E-05 13684100 37750 37010 31794 41317 32851 33332 30325 22016.8 28252 32839 TRUE FALSE 40640.16902 35172.13722 32853.99609 37941.26893 31561.10468 34600.47262 26343.29107 24894.47135 30709.30789 31767.46612 1.279301562 1.107174777 1.034202601 1.194343571 0.993504001 1.089179492 0.829253771 0.783646743 0.966690506 1 14.9552624 -6.924219745 1.57265869 0.880406792 1.134993226 0.550628104 0.096170031 0.281372966 1.425788736 0.045165426 0.03592903 1.19E-07 6.924219745 0.254586434 GPGPGQGS(ph)PGGGPGPR ddPTM_A459_MK2206_30min_R1 2 GPGPGQGSPGGGPGPR 16 0 H0YDS2;Q8IYL2 H0YDS2 TRMT44 Probable tRNA (uracil-O(2)-)-methyltransferase 1 GPGPGQGS(1)PGGGPGPR;GPGPGQGS(1)PGGGPGPR 140.68 0.00039891 7135700 2641.54 2652.79 2741.64 2562.2 2722.68 2230.39 3041.2 2528.56 1954.68 2299.28 TRUE FALSE 2416.863152 2480.092889 2555.545115 2759.541088 2614.22989 2356.672754 2838.327097 2506.453067 2157.875981 2584.132165 0.93527072 0.959739181 0.988937466 1.067879238 1.011647131 0.911978414 1.09836762 0.969939967 0.835048613 1 11.33546414 -9.883677649 5.796702592 0.999999992 0.980732767 0.005648649 0.071435655 20140929.73 8585330.577 0.069623176 0.017405794 1.31E-10 9.883677649 -0.019267225 GPGPGQGS(ph)PGGGPGPR ddPTM_A459_MK2206_30min_R2 4 GPGPGQGSPGGGPGPR 16 0 H0YDS2;Q8IYL2 H0YDS2 TRMT44 Probable tRNA (uracil-O(2)-)-methyltransferase 1 GPGPGQGS(1)PGGGPGPR;GPGPGQGS(1)PGGGPGPR;GPGPGQGS(1)PGGGPGPR;GPGPGQGS(1)PGGGPGPR 132.5 0.00061388 10432300 32798 40071.6 35902.1 41701.4 38727.9 37149.5 36935.7 33511.2 35795.1 41354.6 TRUE FALSE 35309.0401 38081.70261 37099.0581 38294.26222 37207.24805 38563.25025 32085.99822 37891.2289 38908.4931 40005.20279 0.882611201 0.95191875 0.927355831 0.957232049 0.930060229 0.963955875 0.802045634 0.947157526 0.972585823 1 15.28790002 -8.241880494 3.442282497 0.991215901 0.919833693 0.268616474 0.045161226 0.331804169 7.852099228 0.03959053 0.011786384 5.73E-09 8.241880494 -0.071382208 GPGQPS(ph)SPQRLDR ddPTM_A459_MK2206_30min_R2 1 GPGQPSSPQRLDR 13 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GPGQPS(0.713)S(0.287)PQRLDR 135.04 0.0055454 6761700 18896 29510 27922 28671 26492 28275 28765 22255 23599 23778 TRUE FALSE 20342.69229 28044.57631 28852.90554 26328.48759 25451.79097 29351.02494 24988.12095 25163.80491 25651.59836 23002.12581 0.884383142 1.219216717 1.254358218 1.144611059 1.106497338 1.276013582 1.086339635 1.093977362 1.115183813 1 14.48947958 -8.689545394 0.873752572 1.002196071 1.149792956 0.125177303 0.104461144 1.615456268 2.569942326 0.099969708 0.034488298 2.04E-09 8.689545394 0.147596885 GPGQPSS(ph)PQR ddPTM_A459_MK2206_30min_R1 2 GPGQPSSPQR 10 0 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GPGQPS(0.005)S(0.995)PQR;GPGQPS(0.037)S(0.963)PQR 91.701 0.027661 26085000 13429.5 13663.5 13982.6 9316.7 12018.4 12538.1 15288.6 10735.8 12123.7 17111 TRUE FALSE 12287.2505 12774.00367 13033.50007 10034.27385 11539.68168 13247.99639 14268.72539 10641.93803 13384.002 19230.83986 0.63893468 0.664245751 0.677739514 0.521780324 0.600061243 0.688893282 0.741970995 0.553378745 0.695965548 1 14.23113415 -14.522843 0.372029817 5.804762059 0.632190232 0.745232908 0.063030791 282.8381256 2.172549844 1093.000492 0.045535432 3.00E-15 14.522843 -5.172571826 GPGQPSS(ph)PQR ddPTM_A459_MK2206_30min_R2 3 GPGQPSSPQR 10 0 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GPGQPS(0.009)S(0.991)PQR;GPGQPS(0.004)S(0.996)PQR;GPGQPS(0.001)S(0.999)PQR 100.09 0.017801 72499900 214888 182085 187926 213429 174353 191287 213785 186257 146466 210048 TRUE FALSE 231339.9905 173042.9237 194191.359 195991.168 167507.0252 198566.5608 185714.7727 210601.4294 159205.3479 203194.151 1.138516977 0.851613705 0.955693646 0.964551229 0.824369325 0.977225771 0.913976962 1.036454191 0.783513439 1 17.63249935 -4.748998492 24.92866755 0.924827063 1.13851749 0.414732526 0.076764055 541.1735763 1084318.87 0.017635426 0.301852501 1.78E-05 4.748998492 0.213690427 GPGQVPTATSALSLELQEVEPLGLPQAS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 GPGQVPTATSALSLELQEVEPLGLPQASPSR 31 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 GPGQVPTATSALSLELQEVEPLGLPQAS(0.689)PS(0.311)R;GPGQVPTATSALSLELQEVEPLGLPQAS(0.557)PS(0.443)R 66.72 0.0002193 80589000 102278 95070 80222 127771 104283 112378 112789 72277 91343 103756 TRUE FALSE 110108.4823 90348.96204 82896.56144 117331.7006 100188.3254 116654.6235 97979.66882 81723.85206 99287.84903 100370.4502 1.097020907 0.900154994 0.825906044 1.168986493 0.998185474 1.162240712 0.976180426 0.814222233 0.989213945 1 16.61497507 -7.527028261 24.9676957 0.92007111 1.020380753 0.115473836 0.111005517 251.6993656 1514439.867 0.053239102 0.03090199 2.97E-08 7.527028261 0.100309643 GPGSWWTST(ph)ESLCSNASGDSR ddPTM_A459_MK2206_30min_R1 1 GPGSWWTSTESLCSNASGDSR 21 0 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ES05 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 GPGSWWTS(0.241)T(0.503)ES(0.256)LCSNASGDSR 162.37 1.41E-07 4209600 831.61 779.22 554.33 804.41 770.88 654.29 850.1 604.78 513.38 432.9 TRUE FALSE 760.8772025 728.4926364 516.7036241 866.3657976 740.1742172 691.3353344 793.3913801 599.4924722 566.7476881 486.5309202 1.563882522 1.497320327 1.062016005 1.780700386 1.521330272 1.420948404 1.630711116 1.23217754 1.164874964 1 8.926387684 -7.947104351 4.350463581 1.11101676 1.48853399 0.478529347 0.177729164 0.190439649 7.482875784 0.108959324 0.04755703 1.13E-08 7.947104351 0.377517229 GPHHLDNS(ph)SPGPGSEAR ddPTM_A459_MK2206_30min_R1 2 GPHHLDNSSPGPGSEAR 17 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 GPHHLDNS(0.836)S(0.164)PGPGSEAR;GPHHLDNS(0.562)S(0.403)PGPGS(0.035)EAR 192.18 5.40E-08 29876700 6091.8 4367.3 4531.6 3071.38 6338.1 6081.1 6633.4 4426 3877.5 3421.53 TRUE FALSE 5573.660421 4082.987976 4224.007618 3307.93822 6085.640056 6425.406627 6190.897989 4387.303949 4280.580001 3845.414968 1.449430157 1.061780851 1.098453003 0.860229194 1.58257044 1.670926722 1.609942761 1.140918207 1.113164648 1 11.90892358 -3.640684825 16.14713965 1.271856717 1.274736653 0 0.275954065 0 0 0.068433231 0 0.000228726 3.640684825 0.002879936 GPHHLDNS(ph)SPGPGSEAR ddPTM_A459_MK2206_30min_R2 1 GPHHLDNSSPGPGSEAR 17 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 GPHHLDNS(0.673)S(0.327)PGPGSEAR 168.62 7.54E-07 3643200 10827 10264 9233.9 11271 9570.5 12199 10350 8079 10451 11606 TRUE FALSE 11655.92344 9754.304685 9541.753617 10350.12325 9194.714082 12663.24149 8991.032567 9134.953039 11360.00909 11227.29717 1.038177156 0.868802574 0.849870942 0.921871319 0.818960605 1.127897596 0.800818971 0.813637771 1.011820469 1 13.45472304 GPHHLDNSS(ph)PGPGSEAR ddPTM_A459_MK2206_30min_R1 2 GPHHLDNSSPGPGSEAR 17 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 GPHHLDNS(0.014)S(0.986)PGPGSEAR;GPHHLDNS(0.262)S(0.732)PGPGS(0.006)EAR 216.16 7.10E-12 37817900 7385.61 5760.92 5907.08 4845.56 6631 6129 6619.1 5535.13 4302.44 4198.86 TRUE FALSE 6757.425086 5385.883061 5506.123868 5218.765871 6366.873229 6476.018683 6177.551916 5486.736942 4749.694034 4719.046477 1.431947136 1.141307484 1.166787379 1.105894146 1.349186379 1.372315089 1.309067827 1.162679149 1.006494439 1 12.20427966 -8.115483222 3.009388603 0.999761354 1.2596769 0.523569302 0.0999482 0.23846577 3.880323361 0.087746758 0.02853778 7.67E-09 8.115483222 0.259915546 GPHHLDNSS(ph)PGPGSEAR ddPTM_A459_MK2206_30min_R2 3 GPHHLDNSSPGPGSEAR 17 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 GPHHLDNS(0.038)S(0.961)PGPGS(0.001)EAR;GPHHLDNS(0.239)S(0.76)PGPGS(0.001)EAR;GPHHLDNS(0.246)S(0.754)PGPGSEAR 152.86 0.00010067 51869800 122777.2 131530.2 110403.7 122570 126333 143305 141216 121705.8 113325.7 139597.2 TRUE FALSE 132177.1168 124998.6015 114084.5043 112555.6389 121372.5316 148758.5722 122674.1696 137613.1659 123182.5645 135042.1548 0.978784121 0.925626533 0.844806604 0.833485211 0.89877514 1.101571375 0.908413893 1.019038582 0.912178606 1 17.0430503 -6.564197109 24.99995776 0.986189329 0.890674836 0.341864658 0.063615128 168.6838713 102062.2459 0.020920679 0.020920697 2.73E-07 6.564197109 -0.095514493 GPHHLDNSSPGPGSEAR ddPTM_A459_MK2206_30min_R2 2 GPHHLDNSSPGPGSEAR 17 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 0 ; 95.822 0.0035195 1343210 1739.08 3489.85 4748.1 6521.1 6425.6 5040.7 5667.6 3337.7 4523.4 4398.2 FALSE TRUE 1872.225302 3316.549124 4906.399284 5988.30527 6173.298658 5232.527371 4923.437312 3773.94885 4916.837156 4254.687094 0.440038306 0.779504826 1.153175116 1.407460793 1.450940697 1.229826602 1.157179648 0.88700973 1.15562838 1 12.05483732 -5.035469236 2.357010945 1.197195944 0.425308487 0.696136151 0.158413835 0.219817614 2.087896044 0.048123166 0.278618024 9.22E-06 5.035469236 -0.771887456 GPIHS(ph)PVELK ddPTM_A459_MK2206_30min_R1 1 GPIHSPVELK 10 0 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 GPIHS(1)PVELK 78.964 0.033885 4039100 3434 3503.5 3628.9 2958.9 3309.2 3027.6 3430.7 3015.3 3113.6 3059.6 TRUE FALSE 3141.920267 3275.421513 3382.580379 3186.794991 3177.387557 3199.020096 3201.844263 2988.93755 3437.269862 3438.646347 0.913708463 0.952532242 0.983695338 0.926758576 0.92402278 0.930313784 0.931135086 0.869219236 0.999599702 1 11.74762503 -8.348723184 15.3820274 0.999871656 0.931421307 0.517785521 0.027274431 2.552420019 447.4649908 0.027237026 0.007032679 4.48E-09 8.348723184 -0.068450349 GPIHS(ph)PVELK ddPTM_A459_MK2206_30min_R2 4 GPIHSPVELK 10 0 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 GPIHS(1)PVELK;GPIHS(1)PVELK;GPIHS(1)PVELK;GPIHS(1)PVELK 112.43 0.0054528 24557700 236433 255738 251578 250505 244028 216917 279917 210434 181464 250531 TRUE FALSE 254534.4923 243038.4228 259965.485 230037.9402 234446.2346 225171.9284 243163.5617 237938.4463 197247.4107 242356.194 1.050249585 1.002814984 1.072658721 0.949172936 0.967362256 0.929095002 1.003331327 0.981771674 0.813874023 1 17.88676943 -5.775354715 24.96843861 0.950640895 1.037998481 0.389127461 0.053124565 235.772808 423049.1397 0.014663506 0.021872156 1.68E-06 5.775354715 0.087357585 GPKPEPPGS(ph)GSPAPPR ddPTM_A459_MK2206_30min_R1 1 GPKPEPPGSGSPAPPR 16 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 GPKPEPPGS(0.868)GS(0.132)PAPPR 116.09 0.0010715 46666000 6028.4 7506.1 6441.5 6280 7422 7199.8 7630 6610.3 6007.7 5589.3 TRUE FALSE 5515.652924 7017.451526 6004.268927 6763.686688 7126.366024 7607.446454 7121.016622 6552.506844 6632.221914 6281.744681 0.878044748 1.117118234 0.955828234 1.076721044 1.13445649 1.211040378 1.133604911 1.043103019 1.055792976 1 12.61694959 -4.756112469 24.99629499 1.085554691 0.878044422 0.432263249 0.069539651 172.9103802 811286.6831 0.018569133 0.154535253 1.75E-05 4.756112469 -0.207510269 GPKPEPPGSGS(ph)PAPPR ddPTM_A459_MK2206_30min_R1 4 GPKPEPPGSGSPAPPR 16 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 GPKPEPPGS(0.034)GS(0.966)PAPPR;GPKPEPPGS(0.001)GS(0.999)PAPPR;GPKPEPPGS(0.089)GS(0.911)PAPPR;GPKPEPPGS(0.173)GS(0.827)PAPPR 193.41 5.50E-06 45452400 8022 8718.2 8391.6 7509.5 7874.5 7430 7487.4 7687.7 6786.5 6497.27 TRUE FALSE 7339.686775 8150.643595 7822.001572 8087.882991 7560.84199 7850.680179 6987.929208 7620.487249 7491.980961 7302.200859 1.005133509 1.116190002 1.071184116 1.107595251 1.035419613 1.075111508 0.956962064 1.043587734 1.025989439 1 12.83411564 -7.222185561 24.94055503 1.010267104 1.07101324 0.405450256 0.036479244 519.2230069 329897.1689 0.01345891 0.010425094 6.00E-08 7.222185561 0.060746136 GPKPEPPGSGS(ph)PAPPR ddPTM_A459_MK2206_30min_R2 3 GPKPEPPGSGSPAPPR 16 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 GPKPEPPGS(0.159)GS(0.841)PAPPR;GPKPEPPGS(0.005)GS(0.995)PAPPR;GPKPEPPGS(0.251)GS(0.749)PAPPR 139.12 0.0011022 160196000 475194 490288 474944 546811 494422 485377 550816 418141 432923 524472 TRUE FALSE 511575.218 465941.0109 490778.3959 502134.7921 475008.508 503848.3619 478493.1976 472793.4644 470577.86 507358.5216 1.008311078 0.918366384 0.967320691 0.989704067 0.936238356 0.9930815 0.943106654 0.931872521 0.92750558 1 18.95264605 GPLS(ph)PFNSR ddPTM_A459_MK2206_30min_R1 3 GPLSPFNSR 9 0 A1L390-3;A1L390;A0A0U1RR71;G3V3I3;G3V278 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 GPLS(0.991)PFNS(0.009)R;GPLS(0.698)PFNS(0.302)R;GPLS(0.836)PFNS(0.164)R 106.16 0.01333 168491000 10504.7 9802.8 10441.5 8076.6 10613.2 9221.6 10447.4 9517 9427.5 8655 TRUE FALSE 9611.220103 9164.635938 9732.760072 8698.661131 10190.45377 9743.719023 9750.473008 9433.793872 10407.52236 9727.246742 0.988071996 0.942161352 1.000566792 0.894257272 1.047619541 1.001693417 1.002387753 0.969831867 1.069935064 1 13.2478158 -6.282274028 24.97305192 1.012415796 0.958421443 0.375611684 0.037104805 888.5773764 1065073.906 0.010944954 0.01242429 5.22E-07 6.282274028 -0.053994353 GPLS(ph)PFNSR ddPTM_A459_MK2206_30min_R2 4 GPLSPFNSR 9 0 A1L390-3;A1L390;A0A0U1RR71;G3V3I3;G3V278 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 GPLS(0.999)PFNS(0.001)R;GPLS(0.963)PFNS(0.037)R;GPLS(0.923)PFNS(0.077)R;GPLS(0.998)PFNS(0.002)R 84.687 0.036166 163789000 80076 97040 92558 94065 101262 100790 104446 74959 87681 96403 TRUE FALSE 86206.68013 92221.13471 95643.83752 86379.5886 97285.94508 104625.6341 90732.11474 84756.39867 95307.33489 93257.37801 0.924395281 0.988888351 1.025590034 0.92624938 1.043198374 1.121901948 0.972921571 0.908843895 1.021981713 1 16.50893025 -4.778836538 3.906664811 1.001600617 0.916897801 0.144055926 0.056843257 0.525539885 14.72922961 0.015220694 0.127608236 1.66E-05 4.778836538 -0.084702816 GPLSEETEASDSVDGGHDS(ph)VILDPER ddPTM_A459_MK2206_30min_R1 1 GPLSEETEASDSVDGGHDSVILDPER 26 0 A0A087X030;P51956-2;P51956;A0A087WY58 A0A087X030 NEK3 Serine/threonine-protein kinase Nek3 1 GPLSEETEASDSVDGGHDS(1)VILDPER 154.1 7.97E-12 2915700 776.9 754.07 927.42 518.12 640.92 725.2 652.39 677.13 677.34 616.24 TRUE FALSE 710.8205753 704.9799059 864.4693143 558.0256922 615.3907992 766.2601973 608.8702535 671.2099238 747.7519169 692.5844636 1.026330524 1.017897373 1.248178901 0.805715002 0.888542599 1.106377976 0.879127797 0.969138003 1.079654477 1 9.435846214 -5.762735451 24.99999828 0.9595356 1.089511743 0.265647191 0.103529145 49.48839791 954621.5377 0.029041035 0.045885905 1.73E-06 5.762735451 0.129976143 GPLSS(ph)APEIVHEDLK ddPTM_A459_MK2206_30min_R2 1 GPLSSAPEIVHEDLK 15 0 E5RJM2;E5RGN0;Q00536;Q00536-3;Q00536-2;E5RIY8;H0YBX5;E5RIU4 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 GPLS(0.224)S(0.776)APEIVHEDLK 119.68 0.0012434 1771800 20939 25762 22888 22636 23607 19000 22718 17325 14978 20879 TRUE FALSE 22542.10594 24482.69654 23651.0745 20786.56639 22680.07056 19723.05831 19735.09931 19589.43699 16280.75937 20197.71994 1.116071814 1.212151501 1.170977445 1.029154105 1.122902517 0.976499247 0.977095403 0.969883583 0.806069171 1 14.30190482 -6.668930172 0.780833675 0.914072946 1.171935174 0.686515412 0.063533143 0.358664707 0.483844227 0.040909057 0.043780657 2.14E-07 6.668930172 0.257862228 GPMSTTVAGSQEGS(ph)K ddPTM_A459_MK2206_30min_R2 1 GPMSTTVAGSQEGSK 15 0 O95490-6;O95490-7;A0A6I8PRJ0;H0Y5C0;A0A6I8PTT2;B1ALU3;A0A6I8PRM6;O95490;O95490-2;O95490-5;O95490-3;A0A6I8PUE4;A0A6I8PRQ0;A0A6I8PLG0;O95490-4;A0A6I8PIV6 O95490-6 LPHN2;ADGRL2 Latrophilin-2 1 GPMSTTVAGS(0.001)QEGS(0.999)K 58.246 0.047858 16407000 7640.8 62386 26737 119430 74780 216980 32348 43609 113610 18172 TRUE FALSE 8225.785523 59288.00196 27628.39824 109672.187 71843.76146 225237.3259 28100.66874 49308.84603 123491.5924 17579.04913 0.467931198 3.372651247 1.571666251 6.238800868 4.086896904 12.81282761 1.598531783 2.804977998 7.024930162 1 14.10156942 -5.755564514 24.98946114 5.291838836 1.960938934 0.174940288 3.23320151 249.2024999 1059999.008 0.882375885 1.477746389 1.76E-06 5.755564514 -3.330899902 GPPAS(ph)SPAPAPK ddPTM_A459_MK2206_30min_R1 4 GPPASSPAPAPK 12 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 GPPAS(0.627)S(0.373)PAPAPK;GPPAS(0.5)S(0.5)PAPAPK;GPPAS(0.637)S(0.363)PAPAPK;GPPAS(0.5)S(0.5)PAPAPK 152.96 0.00048183 657391900 29834.8 32020.6 30020.2 25821.7 27699.9 26891.1 31485.2 30314.7 25199.5 25961.2 TRUE FALSE 27297.19359 29936.05312 27982.51247 27810.49181 26596.55433 28413.65084 29384.87976 30049.66177 27819.0782 29177.46945 0.935557267 1.025998953 0.959045215 0.953149548 0.911544244 0.973821629 1.007108578 1.029892665 0.953443829 1 14.83256714 -7.081532097 5.401210294 0.999468351 0.959172756 0.256080231 0.03233019 0.335345587 16.55972319 0.012852797 0.009985128 8.29E-08 7.081532097 -0.040295595 GPPAS(ph)SPAPAPK ddPTM_A459_MK2206_30min_R2 1 GPPASSPAPAPK 12 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 GPPAS(0.59)S(0.41)PAPAPK 119.45 0.0042741 392880000 42847 51011 44529 49722 47257 41881 54960 40520 47294 48494 TRUE FALSE 46127.39926 48477.86792 46013.57464 45659.55355 45401.45273 43474.8108 47743.68598 45816.10313 51407.54663 46911.64475 0.983282499 1.033386661 0.980856137 0.973309586 0.967807737 0.926738149 1.017736347 0.976646702 1.095837652 1 15.51765846 -8.2348414 24.88466723 1.047918837 0.982637531 0.366013129 0.034454294 639.930355 598711.0273 0.02306574 0.008712217 5.82E-09 8.2348414 -0.065281307 GPPASS(ph)PAPAPK ddPTM_A459_MK2206_30min_R1 2 GPPASSPAPAPK 12 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 GPPAS(0.065)S(0.935)PAPAPK;GPPAS(0.261)S(0.739)PAPAPK 132.56 0.0018656 381808100 10232.3 10258 9959.4 8219.9 9971.4 9015.8 9787.9 10106.4 8002.1 9296 TRUE FALSE 9361.989153 9590.202336 9283.383676 8852.998122 9574.218023 9526.266805 9134.96705 10018.04081 8833.946931 10447.65866 0.896084899 0.917928375 0.888561158 0.847366708 0.916398433 0.911808771 0.874355427 0.958879031 0.845543219 1 13.35089205 -11.15539168 2.813743261 1.0095468 0.896649293 0.483221176 0.032478509 30184793.16 29647833.16 2108313.672 0.007814397 6.99E-12 11.15539168 -0.112897507 GPPASS(ph)PAPAPK ddPTM_A459_MK2206_30min_R2 5 GPPASSPAPAPK 12 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 GPPAS(0.265)S(0.735)PAPAPK;GPPAS(0.048)S(0.952)PAPAPK;GPPAS(0.031)S(0.969)PAPAPK;GPPAS(0.163)S(0.837)PAPAPK;GPPAS(0.039)S(0.961)PAPAPK 151.55 0.00051962 911908100 232520 266318 258364 267532 247013 238653 292739 229762 246990 256788 TRUE FALSE 250321.91 253093.0354 266977.7268 245673.7798 237314.0285 247735.1071 254302.0177 259792.6823 268472.7437 248409.0286 1.007700531 1.018856025 1.074750496 0.988988932 0.955335761 0.997287049 1.023722926 1.045826248 1.080768864 1 17.92235808 -7.609360545 3.498368799 1.04742284 1.007707034 0.175299332 0.033463545 0.411314162 9.926673385 0.018705956 0.010101554 2.46E-08 7.609360545 -0.039715806 GPPASSPAPAPKFS(ph)PVTPK ddPTM_A459_MK2206_30min_R1 1 GPPASSPAPAPKFSPVTPK 19 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 GPPAS(0.001)S(0.005)PAPAPKFS(0.971)PVT(0.022)PK 65.438 0.013193 67896000 5994.6 6562.2 7347.1 7842.2 6687.3 4931.5 4738.7 7368 4188.4 2444.6 TRUE FALSE 5484.727791 6134.999587 6848.399322 8446.207603 6420.93068 5210.717268 4422.589969 7303.582353 4623.799168 2747.455504 1.996293583 2.232975049 2.492633389 3.074192682 2.337046286 1.896561113 1.609703947 2.658307784 1.682938691 1 11.4238804 -6.722039511 4.529725013 1.859590786 2.464758813 0.330222175 0.460434567 0.279742936 12.6977766 0.159734362 0.154355743 1.90E-07 6.722039511 0.605168027 GPPASSPAPAPKFS(ph)PVTPK ddPTM_A459_MK2206_30min_R2 2 GPPASSPAPAPKFSPVTPK 19 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 GPPASSPAPAPKFS(0.959)PVT(0.041)PK;GPPASSPAPAPKFS(0.825)PVT(0.175)PK 90.397 0.0014859 129062000 87958 209108 163427 176620 282035 195656 202215 134840 240978 185319 TRUE FALSE 94692.13211 198724.0008 168875.5746 162189.581 270960.8888 203101.8262 175663.9276 152464.051 261937.8309 179272.0562 0.528203525 1.108505168 0.942007239 0.904712003 1.511450778 1.132925178 0.979873447 0.850461886 1.46111913 1 17.4517911 -4.53937234 2.383884634 1.09873414 1.37E-06 0.385401302 0.213819342 1.94184378 6.545089541 0.056081584 5.807587413 2.89E-05 4.53937234 -1.098732767 GPPDFS(ph)SDEEREPTPVLGSGAAAAGR ddPTM_A459_MK2206_30min_R1 5 GPPDFSSDEEREPTPVLGSGAAAAGR 26 1 P42166;G5E972;P42167;P42167-2;P42167-3 P42166;G5E972 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 GPPDFS(0.83)S(0.168)DEEREPT(0.002)PVLGSGAAAAGR;GPPDFS(0.511)S(0.453)DEEREPT(0.011)PVLGS(0.025)GAAAAGR;GPPDFS(0.541)S(0.453)DEEREPT(0.005)PVLGSGAAAAGR;GPPDFS(0.548)S(0.445)DEEREPT(0.006)PVLGSGAAAAGR;GPPDFS(0.342)S(0.289)DEEREPT(0.342)PVLGS(0.027)GAAAAGR 79.455 8.35E-05 627490000 2579.8 2174.57 2718.33 2225.19 2493.51 2367.85 2295.73 2218.67 2221.42 2282.2 TRUE FALSE 2360.374463 2033.005098 2533.817333 2396.574519 2394.188217 2501.915621 2142.58604 2199.272402 2452.344558 2564.936166 0.920246864 0.792614306 0.9878676 0.934360298 0.933429942 0.975429975 0.835336984 0.85743748 0.956103544 1 11.32470721 -5.263224585 24.99844475 0.927710432 0.856430589 0.219429302 0.057983709 244.9414991 3430000.655 0.015199608 0.034498588 5.45E-06 5.263224585 -0.071279843 GPPDFS(ph)SDEEREPTPVLGSGAAAAGR ddPTM_A459_MK2206_30min_R2 5 GPPDFSSDEEREPTPVLGSGAAAAGR 26 1 P42166;G5E972;P42167;P42167-2;P42167-3 P42166;G5E972 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 GPPDFS(0.584)S(0.406)DEEREPT(0.009)PVLGS(0.001)GAAAAGR;GPPDFS(0.498)S(0.498)DEEREPT(0.003)PVLGS(0.001)GAAAAGR;GPPDFS(0.531)S(0.453)DEEREPT(0.015)PVLGS(0.001)GAAAAGR;GPPDFS(0.551)S(0.448)DEEREPT(0.001)PVLGSGAAAAGR;GPPDFS(0.548)S(0.448)DEEREPT(0.004)PVLGSGAAAAGR 76.668 9.99E-05 618127200 41149.8 43453.65 29793.5 39596 33419.3 48423.3 50024.4 29275.5 24054.23 44671 TRUE FALSE 44300.26033 41295.80493 30786.80042 36360.88014 32107.09036 50266.08261 43456.13619 33101.90837 26146.42345 43213.38893 1.025151265 0.955625235 0.712436612 0.841426258 0.74298941 1.163206216 1.005617409 0.76601047 0.60505376 1 15.39919076 -7.788922126 23.29880844 0.764148626 0.913655384 0.121758927 0.15514473 208.2721542 176559.3543 0.087694396 0.042150603 1.63E-08 7.788922126 0.149506757 GPPDFSSDEEREPT(ph)PVLGSGAAAAGR ddPTM_A459_MK2206_30min_R1 2 GPPDFSSDEEREPTPVLGSGAAAAGR 26 1 P42166;G5E972;P42167;P42167-2;P42167-3 P42166;G5E972 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 GPPDFSSDEEREPT(0.959)PVLGS(0.041)GAAAAGR;GPPDFS(0.001)S(0.001)DEEREPT(0.996)PVLGS(0.002)GAAAAGR 113.08 1.73E-08 182954000 5211.8 6422.4 4038.8 4274.9 6441.4 6118.4 4928.4 4740.6 5530.8 3834.4 TRUE FALSE 4768.509042 6004.300593 3764.657509 4604.153539 6184.825398 6464.818521 4599.635428 4699.153434 6105.746452 4309.43442 1.106527812 1.393292021 0.873585056 1.06838928 1.435182624 1.500154751 1.067340857 1.090433912 1.416832432 1 12.07328282 -4.496211895 17.30849865 1.207957318 0.812969379 0.02004316 0.205694793 154147016.4 2792435000 0.052573414 1753153629 3.19E-05 4.496211895 -0.39498794 GPPDFSSDEEREPT(ph)PVLGSGAAAAGR ddPTM_A459_MK2206_30min_R2 3 GPPDFSSDEEREPTPVLGSGAAAAGR 26 1 P42166;G5E972;P42167;P42167-2;P42167-3 P42166;G5E972 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 GPPDFSSDEEREPT(0.882)PVLGS(0.117)GAAAAGR;GPPDFSSDEEREPT(0.905)PVLGS(0.094)GAAAAGR;GPPDFSSDEEREPT(0.862)PVLGS(0.138)GAAAAGR 80.943 0.00018834 167413400 101624 61824 69421 75278 42205.7 85741 130400 62747 71747.1 58926.9 TRUE FALSE 109404.4116 58753.91006 71735.46149 69127.5466 40548.49215 89003.93384 113278.3234 70948.24834 77987.53307 57004.12008 1.919236915 1.030695851 1.258425907 1.212676321 0.711325639 1.561359665 1.987195368 1.244616148 1.368103445 1 15.79877858 GPPEDRDAEPQPGS(ph)PAAESLEEPDAAAGLSSTK ddPTM_A459_MK2206_30min_R1 2 GPPEDRDAEPQPGSPAAESLEEPDAAAGLSSTK 33 1 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 GPPEDRDAEPQPGS(0.974)PAAES(0.026)LEEPDAAAGLSSTK;GPPEDRDAEPQPGS(1)PAAESLEEPDAAAGLSSTK 131.83 2.72E-25 21282000 1990.37 1810.46 2090.11 1582.7 2204.65 1731.95 1531.44 1886.36 1096.77 645.241 TRUE FALSE 1821.07858 1692.598725 1948.239157 1704.599828 2116.834122 1830.011512 1429.280432 1869.867753 1210.783166 725.1783264 2.511214847 2.334044832 2.686565615 2.350594007 2.919053211 2.523533103 1.970936499 2.57849371 1.669635071 1 9.502191997 -8.584024172 1.041912506 0.986532817 2.526607831 0.791532471 0.245171244 0.264200394 0.621613876 0.229277362 0.074724742 2.61E-09 8.584024172 1.540075014 GPPNS(ph)PDLK ddPTM_A459_MK2206_30min_R1 1 GPPNSPDLK 9 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 GPPNS(1)PDLK 85.924 0.034527 10913000 3346.5 3640.3 3808.1 3101.4 2779 2649.3 2818.2 2868.2 3143.3 2883.1 TRUE FALSE 3061.862602 3403.315808 3549.616782 3340.270365 2668.306545 2799.301077 2630.20302 2843.12363 3470.057283 3240.280194 0.944937604 1.050315283 1.095466 1.030858495 0.823480189 0.863907103 0.811720858 0.877431413 1.070912722 1 11.66190286 -6.235167597 20.09761506 0.894770906 1.036465666 0.340614743 0.082105842 68.67425644 52533.63157 0.024743766 0.031911385 5.82E-07 6.235167597 0.14169476 GPPPRS(ph)PR ddPTM_A459_MK2206_30min_R2 1 GPPPRSPR 8 1 Q01130-2 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 GPPPRS(1)PR 75.738 0.03162 443020 1212.7 0 548.25 779.39 692.47 941.49 825.48 1002.3 525.92 842.08 TRUE FALSE 1305.545244 0 566.5283814 715.7113439 665.2801484 977.3190617 717.0934844 1133.304051 571.663571 814.6029986 1.602676699 0 0.695465622 0.878601411 0.816692487 1.199748913 0.880298115 1.391234814 0.701769539 1 9.669953315 -6.365668825 1.889063044 1.046028686 0.71147574 0.061334739 0.403098689 0.763840883 5.383746591 0.138396694 0.168246126 4.31E-07 6.365668825 -0.334552946 GPPQEEEEEEDEEEEATKEDAEAPGIR ddPTM_A459_MK2206_30min_R1 1 GPPQEEEEEEDEEEEATKEDAEAPGIR 27 1 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 0 103.71 6.56E-07 4970500 491.93 480.68 399.37 254.25 377.41 431.74 393.74 392.38 520.81 576.71 FALSE TRUE 450.0887703 449.3876446 372.2618771 273.8323791 362.3769605 456.1847457 367.474323 388.949463 574.9500632 648.1571887 0.694412988 0.693331267 0.574338885 0.422478349 0.559088084 0.703818076 0.566952476 0.600085087 0.887053439 1 9.340199923 -8.364773442 3.122488607 0.995175364 0.597328938 0.749493405 0.080162667 0.128146186 2.274734556 0.083613062 0.022646086 4.32E-09 8.364773442 -0.397846426 GPPQEEEEEEDEEEEATKEDAEAPGIR ddPTM_A459_MK2206_30min_R2 2 GPPQEEEEEEDEEEEATKEDAEAPGIR 27 1 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 0 ; 131.94 1.60E-11 10739100 20136.2 23432 22938 22254 22340 16816.1 25373 17145.1 21389.5 25119 FALSE TRUE 21677.84295 22268.40095 23702.74147 20435.77701 21462.81935 17456.04847 22041.49462 19386.02344 23249.92005 24299.36909 0.892115465 0.916418894 0.975446786 0.841000313 0.883266527 0.718374556 0.907080943 0.797799456 0.956811675 1 14.56863124 -5.778286025 24.99358113 0.859146739 0.926836248 0.082820304 0.077359014 450.7655938 668751.8732 0.020789715 0.030926669 1.67E-06 5.778286025 0.067689508 GPPQS(ph)PVFEGVYNNSR ddPTM_A459_MK2206_30min_R1 4 GPPQSPVFEGVYNNSR 16 0 H3BUF6;Q8WWM7-7;H3BSK9;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR;GPPQS(0.998)PVFEGVY(0.002)NNSR 214.46 1.24E-08 667060000 7010.9 6593.7 7243.5 5985.7 7214.8 6418.8 6858.6 6869 6190.8 6014.7 TRUE FALSE 6414.586139 6164.448932 6751.831402 6446.719651 6927.419238 6782.226909 6401.075308 6808.945057 6834.355814 6759.846445 0.94892483 0.911921444 0.998814316 0.953678416 1.024789438 1.003310795 0.946926141 1.007263273 1.011022346 1 12.72277476 -5.268074088 24.98574625 0.99190651 0.930423136 0.508136732 0.024688174 375.1978036 1412966.476 0.006445008 0.013946523 5.39E-06 5.268074088 -0.061483374 GPPQS(ph)PVFEGVYNNSR ddPTM_A459_MK2206_30min_R2 4 GPPQSPVFEGVYNNSR 16 0 H3BUF6;Q8WWM7-7;H3BSK9;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 GPPQS(1)PVFEGVYNNSR;GPPQS(0.94)PVFEGVY(0.051)NNS(0.009)R;GPPQS(1)PVFEGVYNNSR;GPPQS(0.997)PVFEGVY(0.003)NNSR 197.41 1.06E-06 826310000 150608 187337 191521 196076 180529 202929 187560 143852 166140 178589 TRUE FALSE 162138.6643 178034.117 197906.2146 180055.9636 173440.5244 210651.6053 162933.1467 162653.9503 180590.5569 172761.6556 0.938510712 1.030518702 1.145544791 1.0422218 1.003929511 1.21931921 0.943109431 0.941493353 1.045316198 1 17.39842352 GPPS(ph)PGPAAQPPAPPR ddPTM_A459_MK2206_30min_R1 1 GPPSPGPAAQPPAPPR 16 0 H9KV50;Q9NZV5-2;Q9NZV5 H9KV50 SEPN1 Selenoprotein N 1 GPPS(1)PGPAAQPPAPPR 93.424 0.010015 5598000 693.38 583.6 592.19 734.77 821.83 781.38 505.34 865.27 598.83 517.73 TRUE FALSE 634.4043899 545.6075339 551.9937927 791.3621127 789.0947708 825.6210603 471.6296906 857.7050356 661.0805214 581.8703011 1.090284878 0.937678952 0.948654351 1.3600318 1.356135155 1.418909092 0.810540923 1.474048485 1.136130372 1 9.184553802 -5.749499027 24.99994979 1.238625884 0.986753275 0.22238139 0.195385957 309.0844124 647135.6932 0.051908298 0.089018579 1.78E-06 5.749499027 -0.251872608 GPPS(ph)PGPAAQPPAPPR ddPTM_A459_MK2206_30min_R2 2 GPPSPGPAAQPPAPPR 16 0 H9KV50;Q9NZV5-2;Q9NZV5 H9KV50 SEPN1 Selenoprotein N 1 GPPS(1)PGPAAQPPAPPR;GPPS(1)PGPAAQPPAPPR 137.39 0.00040737 18094300 16375.4 17973.2 16420.6 17097.8 14743.3 20163.6 23383 20283.1 20116 15125.8 TRUE FALSE 17629.11321 17080.67702 16968.05461 15700.85505 14164.40396 20930.93993 20312.78401 22934.17081 21865.65332 14632.24638 1.204812491 1.167331152 1.159634287 1.073031074 0.968026617 1.430466613 1.388220474 1.567371831 1.494346988 1 13.83686365 -6.778131897 24.98449043 1.412300719 1.117694636 0.408612073 0.154236195 212.8734443 318615.8135 0.05265668 0.046563518 1.67E-07 6.778131897 -0.294606084 GPPS(ph)PPAPVMHS(ph)PSR ddPTM_A459_MK2206_30min_R1 2 GPPSPPAPVMHSPSR 15 0 G3V4X8;G3V3A4;Q13573 G3V4X8 SNW1 SNW domain-containing protein 1 2 GPPS(1)PPAPVMHS(0.894)PS(0.106)R;GPPS(1)PPAPVMHS(0.912)PS(0.088)R 127.1 0.0043348 67276000 8195.2 7707.5 8541.7 6627.4 9105 8313.5 9214.6 7905.8 6579.8 6497.5 TRUE FALSE 7498.155205 7205.740349 7961.913203 7137.843496 8742.32857 8784.203186 8599.910847 7836.680424 7263.793756 7302.459354 1.026798623 0.986755283 1.09030572 0.977457477 1.19717593 1.202910247 1.177673224 1.073156322 0.994705127 1 12.83416671 -6.249391152 24.96267109 1.119530119 1.022929452 0.236052025 0.075041193 1057.89227 2191840.663 0.023353027 0.029893272 5.63E-07 6.249391152 -0.096600667 GPPS(ph)PPAPVMHS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 GPPSPPAPVMHSPSR 15 0 G3V4X8;G3V3A4;Q13573 G3V4X8 SNW1 SNW domain-containing protein 1 2 GPPS(1)PPAPVMHS(0.842)PS(0.158)R;GPPS(1)PPAPVMHS(0.969)PS(0.031)R 123.58 0.0056928 24697400 38066 43225 42641 43790 45101 40884 41715 35784 47152 44972 TRUE FALSE 40980.36223 41078.50936 44062.62966 40212.21692 43330.10813 42439.86927 36237.77039 40461.09166 51253.19573 43504.56732 0.941978389 0.944234408 1.012827672 0.92432173 0.995989865 0.975526752 0.832964735 0.930042388 1.178110688 1 15.40887925 -8.241523841 24.73727138 1.089055352 0.945317425 0.47244551 0.06099938 522.5279825 649039.3176 0.040856907 0.015395319 5.73E-09 8.241523841 -0.143737927 GPPS(ph)PPAPVMHSPSR ddPTM_A459_MK2206_30min_R1 2 GPPSPPAPVMHSPSR 15 0 G3V4X8;G3V3A4;Q13573 G3V4X8 SNW1 SNW domain-containing protein 1 1 GPPS(0.999)PPAPVMHS(0.001)PSR;GPPS(1)PPAPVMHSPSR 98.421 0.0088919 57535000 7828.1 6497.8 7352.8 6341.6 8475.7 7278.4 7503.7 7403.3 6158.3 5913.9 TRUE FALSE 7162.278988 6074.792039 6853.712422 6830.031131 8138.094921 7690.496718 7003.141864 7338.573729 6798.477323 6646.55858 1.077592096 0.913975551 1.031167083 1.027604143 1.224407312 1.157064461 1.05364931 1.104116309 1.022856752 1 12.69839183 -6.019987722 24.52961774 1.10241473 1.003412547 0.232764983 0.071651859 762.6178668 935911.1453 0.021195352 0.027753497 9.55E-07 6.019987722 -0.099002183 GPPS(ph)PPAPVMHSPSR ddPTM_A459_MK2206_30min_R2 3 GPPSPPAPVMHSPSR 15 0 G3V4X8;G3V3A4;Q13573 G3V4X8 SNW1 SNW domain-containing protein 1 1 GPPS(1)PPAPVMHSPSR;GPPS(1)PPAPVMHSPSR;GPPS(1)PPAPVMHSPSR 92.671 0.008774 54335000 150357 165048 148849 160079 184024 175957 224741 183093 180719 204966 TRUE FALSE 161868.4475 156851.9563 153811.5514 147000.0336 176798.2931 182653.1669 195232.2367 207023.8838 196437.612 198277.9762 0.816371292 0.791070997 0.775736944 0.741383569 0.89166884 0.921197454 0.984639043 1.044109324 0.990718262 1 17.59716491 -6.762894748 1.468568412 1.010338606 0.781402054 0.920758316 0.028975776 0.10214969 0.45896117 0.013524282 0.012233291 1.73E-07 6.762894748 -0.228936552 GPQGS(ph)PLLSR ddPTM_A459_MK2206_30min_R2 2 GPQGSPLLSR 10 0 Q8TEP8-1;H0Y966;A0A0A0MR42;K7ENP4;Q8TEP8;K7EPA2 Q8TEP8-1 CEP192 Centrosomal protein of 192 kDa 1 GPQGS(1)PLLSR;GPQGS(1)PLLSR 102.05 0.015706 34220000 24159 26734 21991 35113 19453.5 25697 28629 25169.7 30817 31635 TRUE FALSE 26008.63162 25406.42843 22724.16896 32244.15558 18689.65784 26674.91734 24869.97791 28459.46621 33497.40696 30602.75254 0.849878833 0.830200761 0.742553106 1.053635798 0.610718197 0.871650918 0.812671274 0.929964263 1.094588041 1 14.9013738 -7.994557774 3.312756765 1.044800534 0.824208035 0.412669841 0.106326467 0.231259027 5.168079596 0.071756881 0.027122588 1.01E-08 7.994557774 -0.220592498 GPQPPTVS(ph)PIR ddPTM_A459_MK2206_30min_R1 2 GPQPPTVSPIR 11 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GPQPPT(0.215)VS(0.785)PIR;GPQPPT(0.045)VS(0.955)PIR 113.54 0.0070392 388500000 3807.1 4373.3 4036.3 3514.6 4412.9 3958.6 3941.5 3378.9 3248.3 2835.2 TRUE FALSE 3483.286153 4088.597375 3762.327202 3785.295101 4237.124849 4182.732511 3678.569727 3349.358634 3585.972409 3186.445981 1.093157133 1.283121509 1.18072838 1.187936379 1.329733777 1.31266387 1.154442833 1.051126758 1.125383085 1 11.63773249 -7.550977018 4.365726139 1.068658705 1.234207815 0.53689558 0.071449844 0.167877813 7.512715729 0.035166846 0.020257391 2.81E-08 7.550977018 0.165549109 GPQPPTVS(ph)PIR ddPTM_A459_MK2206_30min_R2 3 GPQPPTVSPIR 11 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GPQPPT(0.009)VS(0.991)PIR;GPQPPT(0.001)VS(0.999)PIR;GPQPPT(0.002)VS(0.998)PIR 127.78 0.0029026 1221520000 192466 321462 227283 350723 287342 392084 282518 239405 282499 222424 TRUE FALSE 207201.3449 305498.6645 234860.5018 322067.809 276059.5093 407005.0314 245423.0472 270696.0555 307070.2524 215166.3231 0.962982227 1.41982565 1.091530024 1.496831866 1.28300519 1.891583337 1.140620166 1.258078177 1.42712971 1 17.71509277 -4.755031846 24.89593172 1.349608167 0.962981544 0.175840057 0.239096614 349.6656841 1358462.417 0.057405555 0.528246779 1.76E-05 4.755031846 -0.386626623 GPRIS(ph)APNVDFNLEGPK ddPTM_A459_MK2206_30min_R1 1 GPRISAPNVDFNLEGPK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GPRIS(1)APNVDFNLEGPK 72.916 0.014471 18531000 3243 5335.5 5663.3 8132.6 6801 5222.8 4137.5 7058.5 2811.2 1262 TRUE FALSE 2967.16582 4988.15798 5278.890975 8758.974261 6530.101769 5518.510423 3861.494924 6996.788279 3103.4343 1418.346088 2.091989992 3.516883519 3.721863811 6.175484487 4.60402565 3.890806673 2.722533631 4.933061359 2.188065612 1 10.46999389 -8.479645973 4.553640648 1.008236562 3.979570786 0.453001329 1.076577477 0.165415612 7.876237685 1.088761194 0.284104778 3.31E-09 8.479645973 2.971334224 GPS(ph)PAPAS(ph)SPK ddPTM_A459_MK2206_30min_R2 1 GPSPAPASSPK 11 0 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 2 GPS(1)PAPAS(0.718)S(0.282)PK 137.09 0.024779 11403000 175970 150490 164150 135850 133650 102860 182080 121990 102640 178740 TRUE FALSE 189442.3985 143016.8854 169622.6791 124750.6204 128402.2295 106774.4094 158172.6773 137934.5119 111567.4417 172907.7284 1.095627131 0.827128358 0.981001142 0.721486666 0.742605496 0.617522481 0.914780841 0.797734798 0.645242654 1 17.39964283 -5.75816238 24.99379729 0.766281761 0.95383986 0.327920468 0.124060324 97.44932374 743234.2288 0.032797749 0.053936124 1.75E-06 5.75816238 0.187558099 GPS(ph)PAPAS(ph)SPKR ddPTM_A459_MK2206_30min_R1 1 GPSPAPASSPKR 12 1 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 2 GPS(0.999)PAPAS(0.688)S(0.312)PKR 106.54 0.029777 6079900 3478.5 3775.9 4223.4 3569.7 3646.3 3264.7 3637.5 3812.3 3479.1 3460.3 TRUE FALSE 3182.635309 3530.088224 3936.727375 3844.638913 3501.06015 3449.544493 3394.849012 3778.969463 3840.764895 3888.988088 0.818371061 0.907713818 1.012275504 0.988596217 0.900249646 0.887003101 0.872938907 0.971710218 0.987600067 1 11.9251791 -14.52287763 0.010918648 2.065617608 1.26E-07 0.217267248 0.055174254 22409.69058 18.51370726 2064.193161 1482.858571 3.00E-15 14.52287763 -2.065617482 GPS(ph)PAPASS(ph)PKR ddPTM_A459_MK2206_30min_R2 2 GPSPAPASSPKR 12 1 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 2 GPS(0.999)PAPAS(0.234)S(0.767)PKR;GPS(0.998)PAPAS(0.004)S(0.998)PKR 111.72 0.022458 20063800 66027 74953 71041 77397 70250 69646 85768 70948 61216 79481 TRUE FALSE 71082.07789 71230.94301 73409.47148 71073.41752 67491.63202 72296.42733 74506.55857 80221.1472 66540.45703 76887.54148 0.924494093 0.926430234 0.954764193 0.924381456 0.877796724 0.940287931 0.969032917 1.043356904 0.865425734 1 16.23046223 -7.161618572 4.050068346 0.973040409 0.922849909 0.195761185 0.045174957 0.372601351 10.8206385 0.017485843 0.013235423 6.89E-08 7.161618572 -0.050190501 GPS(ph)PEGSSSTESSPEHPPK ddPTM_A459_MK2206_30min_R1 2 GPSPEGSSSTESSPEHPPK 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GPS(0.557)PEGS(0.252)S(0.086)S(0.086)T(0.018)ESSPEHPPK;GPS(0.938)PEGS(0.015)S(0.015)S(0.015)T(0.015)ESSPEHPPK 108.18 0.00049582 14574100 5416.5 3048.1 4339.5 2850.8 6114.4 5713 5303.9 4800.1 2938.1 3381.8 TRUE FALSE 4955.798232 2849.668136 4044.946831 3070.36911 5870.850501 6036.465123 4950.086509 4758.133232 3243.526009 3800.762915 1.30389565 0.74976214 1.064246027 0.807829685 1.544650543 1.58822459 1.302392867 1.251888986 0.853388144 1 11.89207332 -6.250875303 24.95101705 1.288207097 0.970800626 0.219408014 0.249905341 989.2005748 2336366.122 0.075497919 0.096437589 5.61E-07 6.250875303 -0.31740647 GPS(ph)PEGSSSTESSPEHPPK ddPTM_A459_MK2206_30min_R2 2 GPSPEGSSSTESSPEHPPK 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GPS(0.646)PEGS(0.049)S(0.137)S(0.137)T(0.03)ES(0.001)SPEHPPK;GPS(0.365)PEGS(0.365)S(0.227)S(0.037)T(0.006)ESSPEHPPK 131.09 0.00033705 0 54652 83747 66824 107934 105134 101721 110575 76546 88056 81572 TRUE FALSE 58836.19914 79588.24576 69051.87881 99115.44694 101005.9109 105592.0639 96056.36968 86550.82502 95714.95171 78910.31232 0.745608494 1.008591189 0.875067869 1.25605189 1.280009012 1.338127563 1.217285382 1.096825275 1.212958724 1 16.26792623 -5.758488804 24.99963746 1.214000882 0.889639305 0.652615256 0.107785879 46.07873554 390407.1186 0.029534149 0.048441084 1.74E-06 5.758488804 -0.324361577 GPS(ph)PSPVGSPASVAQSR ddPTM_A459_MK2206_30min_R1 3 GPSPSPVGSPASVAQSR 17 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3;A0A087WUV6 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 GPS(0.998)PS(0.002)PVGSPASVAQSR;GPS(0.897)PS(0.097)PVGS(0.005)PASVAQSR;GPS(0.987)PS(0.013)PVGSPASVAQSR 236.75 2.17E-22 87181000 5257.4 5429.2 5147.7 4744 5678.9 5032.3 5248.4 5409.4 4461.7 4502.7 TRUE FALSE 4810.230522 5075.758093 4798.288466 5109.383702 5452.697388 5317.224477 4898.288812 5362.106186 4925.509681 5060.52847 0.950539168 1.003009493 0.948179325 1.009654176 1.077495645 1.050725139 0.967940175 1.059594115 0.973319232 1 12.30507234 -5.929522541 6.593199521 1.025044784 0.971417342 0.305671622 0.036263836 0.256707858 19.04303955 0.01010056 0.01506582 1.18E-06 5.929522541 -0.053627442 GPS(ph)PSPVGSPASVAQSR ddPTM_A459_MK2206_30min_R2 4 GPSPSPVGSPASVAQSR 17 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3;A0A087WUV6 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 GPS(0.991)PS(0.009)PVGSPASVAQSR;GPS(0.956)PS(0.044)PVGSPASVAQSR;GPS(0.975)PS(0.025)PVGSPASVAQSR;GPS(0.986)PS(0.014)PVGSPASVAQSR 237.06 2.10E-22 154535700 107112 123321.8 122472 145851 125111 145929 135194 113868 109877.4 124759.8 TRUE FALSE 115312.5771 117197.8187 126555.1554 133934.5067 120198.5135 151482.4304 117442.8654 128750.9386 119434.3376 120688.8979 0.955453062 0.971073734 1.048606438 1.109750019 0.995936789 1.255148012 0.973104133 1.066800184 0.989605007 1 16.88093344 -5.263388029 3.86805712 1.062103777 0.959632689 0.178445695 0.078119673 0.331725711 11.48857751 0.019980707 0.052619762 5.45E-06 5.263388029 -0.102471088 GPS(ph)PVSLGNQDTLPVAVALTESVNAYFK ddPTM_A459_MK2206_30min_R2 1 GPSPVSLGNQDTLPVAVALTESVNAYFK 28 0 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 GPS(0.988)PVS(0.012)LGNQDTLPVAVALTESVNAYFK 115.32 1.22E-08 0 30521 24041 22488 22921 24045 25600 29020 14525 20693 29505 TRUE FALSE 32857.71123 22847.1589 23237.7387 21048.28098 23100.87248 26574.22594 25209.63914 16423.46737 22492.83974 28542.25427 1.151195379 0.80046792 0.814152186 0.737442838 0.809356972 0.931048602 0.883239246 0.575408908 0.788054073 1 14.80081166 -4.760955322 24.83189185 0.805255007 1.151195804 0.460658121 0.1084775 9.628626092 493395.4321 0.027183987 0.15577942 1.73E-05 4.760955322 0.345940797 GPS(ph)SPPTTTAPMR ddPTM_A459_MK2206_30min_R2 2 GPSSPPTTTAPMR 13 0 Q9NXL9-4;Q9NXL9 Q9NXL9-4 MCM9 DNA helicase MCM9 1 GPS(0.931)S(0.067)PPTT(0.001)T(0.001)APMR;GPS(0.617)S(0.382)PPTT(0.001)TAPMR 133.88 0.0012783 15313600 42407 55471 57664 56066 53601 55743 62098 45454 43568 60526 TRUE FALSE 45653.71253 52716.3908 59586.48898 51485.22845 51496.35542 57864.33893 53944.45801 51394.99387 47357.46589 58551.04158 0.779725028 0.900349326 1.017684526 0.879322162 0.8795122 0.988271726 0.921323627 0.877781035 0.808823628 1 15.83740721 -4.777789287 4.792557482 0.919053912 0.771755696 0.318348056 0.061749614 0.211782157 11.64791205 0.015549587 0.102531074 1.67E-05 4.777789287 -0.147298216 GPS(ph)SVEDIK ddPTM_A459_MK2206_30min_R1 1 GPSSVEDIK 9 0 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 GPS(0.936)S(0.064)VEDIK 99.343 0.018892 4822200 2846.9 3099.1 3251 2811.2 2826.5 2428.7 3962.2 3042.9 2474.7 2426.6 TRUE FALSE 2604.756205 2897.348027 3030.331178 3027.719111 2713.91452 2566.210895 3697.888867 3016.296246 2731.953921 2727.225528 0.955093805 1.062379329 1.111140662 1.110182887 0.995119213 0.94096028 1.355916051 1.105994431 1.001733774 1 11.41321829 GPS(ph)WDPFR ddPTM_A459_MK2206_30min_R1 2 GPSWDPFR 8 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 GPS(1)WDPFR;GPS(1)WDPFR 145.46 0.001989 66749000 19530.6 16344.2 17531.7 13102 16061.3 14449.2 18265.2 14580.8 17142.4 19869.6 TRUE FALSE 17869.41991 15280.18961 16341.69705 14111.11831 15421.54441 15267.30122 17046.76183 14453.3216 18924.41382 22331.19606 0.800199858 0.684253077 0.73178781 0.631901591 0.690583002 0.683675929 0.763360896 0.647225593 0.847442912 1 14.4467729 -8.525137138 3.667715722 0.999496903 0.703416679 0.790957918 0.048332389 0.080817445 3.024571859 0.044744019 0.011778905 2.98E-09 8.525137138 -0.296080224 GPS(ph)WDPFR ddPTM_A459_MK2206_30min_R2 2 GPSWDPFR 8 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 GPS(1)WDPFR;GPS(1)WDPFR 117.31 0.008922 30168000 262580 205560 242710 190041 176568 199472 214430 168854 177578 213990 TRUE FALSE 282683.3267 195352.1893 250801.8303 174514.0424 169635.0531 207063.0467 186275.0834 190923.7976 193023.4135 207007.5238 1.365570301 0.943696083 1.211559008 0.843032365 0.819463225 1.000268217 0.899846923 0.922303663 0.932446367 1 17.65932368 -5.760232771 24.99835987 0.912248505 1.150617253 0.528099992 0.110564816 25.46726327 527602.0083 0.029026648 0.046905305 1.74E-06 5.760232771 0.238368748 GPS(ph)WDPFRDWYPHSR ddPTM_A459_MK2206_30min_R1 1 GPSWDPFRDWYPHSR 15 1 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 GPS(0.999)WDPFRDWY(0.001)PHSR 68.243 0.0319 7568900 3329.4 2267.1 3257.8 3570.8 3762.8 2364.8 3602.8 3482.6 1700.9 1313.5 TRUE FALSE 3046.217047 2119.511378 3036.669613 3845.823635 3612.919708 2498.692932 3362.463786 3452.151995 1877.714642 1476.226296 2.063516315 1.435763191 2.057048855 2.60517215 2.447402351 1.692621882 2.277742778 2.338497833 1.271969376 1 10.52769818 -8.38629714 4.405830834 1.019362584 2.107359111 0.58931177 0.329438655 0.164036582 4.771204403 0.340595982 0.089372553 4.11E-09 8.38629714 1.087996527 GPSAGGGPGSGT(ph)SPQVEWTAR ddPTM_A459_MK2206_30min_R1 1 GPSAGGGPGSGTSPQVEWTAR 21 0 Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-4;Q7Z406-5;A0A2R8Y454;A0A2R8Y4C3;M0QY43 Q7Z406 MYH14 Myosin-14 1 GPSAGGGPGS(0.043)GT(0.576)S(0.381)PQVEWTAR 206.8 3.11E-17 6375400 896.68 917.94 1030.9 784.45 820.75 838.41 1097.6 992.48 618.4 842.2 TRUE FALSE 820.4126573 858.1819392 960.9253803 844.8684749 788.0577895 885.8800497 1024.381107 983.802852 682.684893 946.5380943 0.866750807 0.906653355 1.015199902 0.892587926 0.832568488 0.935915897 1.082239704 1.039369528 0.72124397 1 9.886516759 -7.002609788 24.98944168 0.970434624 0.906210349 0.066548714 0.099632906 293.3543276 2808973.307 0.036119875 0.031297662 9.94E-08 7.002609788 -0.064224274 GPSAGGGPGSGT(ph)SPQVEWTAR ddPTM_A459_MK2206_30min_R2 2 GPSAGGGPGSGTSPQVEWTAR 21 0 Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-4;Q7Z406-5;A0A2R8Y454;A0A2R8Y4C3;M0QY43 Q7Z406 MYH14 Myosin-14 1 GPSAGGGPGS(0.001)GT(0.499)S(0.499)PQVEWTAR;GPSAGGGPGS(0.102)GT(0.449)S(0.449)PQVEWTAR 229.62 1.64E-24 12750300 43360 51353 48353 54626 52367 59578 59737 39055 42669 52855 TRUE FALSE 46679.67494 48802.88469 49965.06489 50162.88106 50310.80846 61845.28254 51893.46014 44159.6226 46380.27249 51130.34568 0.912954417 0.95447985 0.977209605 0.981078465 0.983971608 1.209561205 1.014924884 0.863667593 0.907098747 1 15.64189216 -4.984241687 1.318415326 0.997868289 0.896637848 0.082928964 0.084757522 2.849434418 5.699275199 0.028657077 0.35287434 1.04E-05 4.984241687 -0.101230442 GPSHPLDLGTS(ph)SPNTSQIHWTPYR ddPTM_A459_MK2206_30min_R1 1 GPSHPLDLGTSSPNTSQIHWTPYR 24 0 O60504-2;O60504;H0YAZ3 O60504-2 SORBS3 Vinexin 1 GPSHPLDLGT(0.005)S(0.493)S(0.493)PNT(0.008)S(0.001)QIHWTPYR 91.583 2.78E-05 12379000 2029.7 988.73 1157.6 719.52 2657.9 2729.1 2221.3 1651.1 1005.9 853.48 TRUE FALSE 1857.063357 924.3634973 1079.025337 774.9375551 2552.030215 2883.619284 2073.12113 1636.664607 1110.466905 959.2155458 1.936022998 0.963666093 1.12490393 0.807886776 2.660538839 3.006226594 2.161267234 1.706253213 1.157682347 1 9.90571123 -6.251674609 24.99252186 2.047482596 1.18471496 0.235634149 0.638144219 943.2847861 2414296.722 0.199420667 0.254226372 5.60E-07 6.251674609 -0.862767636 GPSHPLDLGTS(ph)SPNTSQIHWTPYR ddPTM_A459_MK2206_30min_R2 3 GPSHPLDLGTSSPNTSQIHWTPYR 24 0 O60504-2;O60504;H0YAZ3 O60504-2 SORBS3 Vinexin 1 GPSHPLDLGT(0.148)S(0.663)S(0.188)PNT(0.001)SQIHWTPYR;GPSHPLDLGT(0.002)S(0.818)S(0.18)PNTSQIHWTPYR;GPSHPLDLGT(0.036)S(0.481)S(0.481)PNT(0.002)S(0.001)QIHWTPYR 118.85 7.87E-08 15031300 20849.1 68015 30027.5 83160 79269 114854 70019 44049.1 66679 34278.3 TRUE FALSE 22445.32313 64637.474 31028.60186 76365.56198 76156.50077 119224.8495 60825.42119 49806.46861 72478.61889 33159.80188 0.676883511 1.94927202 0.93572941 2.302955918 2.29665126 3.595463263 1.83431196 1.502013456 2.185737392 1 15.01714777 -5.769455204 24.87046446 2.182493424 1.263492655 0.256076333 0.702028828 225.5209347 699718.9378 0.199985272 0.302660919 1.70E-06 5.769455204 -0.91900077 GPSHPLDLGTSS(ph)PNTSQIHWTPYR ddPTM_A459_MK2206_30min_R1 1 GPSHPLDLGTSSPNTSQIHWTPYR 24 0 O60504-2;O60504;H0YAZ3 O60504-2 SORBS3 Vinexin 1 GPSHPLDLGT(0.003)S(0.293)S(0.7)PNT(0.003)S(0.001)QIHWTPYR 115.06 1.00E-07 8774200 3801.8 1300.3 1906.8 1090.2 4592.5 4257.5 4006.2 2857.9 1242.4 1132 TRUE FALSE 3478.436946 1215.650234 1777.371729 1174.167393 4409.571 4498.555971 3738.953708 2832.913682 1371.551926 1272.240706 2.734102854 0.955519052 1.39704045 0.922912926 3.465987984 3.535931486 2.93887288 2.226712027 1.078060087 1 10.31315594 -6.247282067 24.95333364 2.521910532 1.455806114 0.161416662 0.93558514 1245.256044 2194857.263 0.284702137 0.365792816 5.66E-07 6.247282067 -1.066104418 GPSHPLDLGTSS(ph)PNTSQIHWTPYR ddPTM_A459_MK2206_30min_R2 1 GPSHPLDLGTSSPNTSQIHWTPYR 24 0 O60504-2;O60504;H0YAZ3 O60504-2 SORBS3 Vinexin 1 GPSHPLDLGT(0.284)S(0.284)S(0.43)PNT(0.002)SQIHWTPYR 86.136 5.17E-05 9310500 8077.2 25469 13154 37840 31142 46678 28136 18248 30505 13814 TRUE FALSE 8695.596642 24204.2465 13592.54779 34748.35096 29919.2086 48454.364 24441.7094 20633.07625 33158.26976 13363.25031 0.650709703 1.811254443 1.017158811 2.600291856 2.238917023 3.625941509 1.829024289 1.544016296 2.481302751 1 13.70598333 -5.756894203 24.99848281 2.258182536 1.22486216 0.301887498 0.709354603 141.9125767 780507.1702 0.193908119 0.321858662 1.75E-06 5.756894203 -1.033320376 GPSLNPVLDYDHGS(ph)R ddPTM_A459_MK2206_30min_R2 1 GPSLNPVLDYDHGSR 15 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 GPSLNPVLDYDHGS(1)R 66.536 0.0416 2867100 15326 16468 13527 15815 13853 11981 16804 15641 10897 11812 TRUE FALSE 16499.37034 15650.22307 13977.98343 14522.86391 13309.06161 12436.94535 14597.61461 17685.3324 11844.80136 11426.57541 1.443947093 1.369633727 1.223287199 1.27097257 1.164746316 1.088422813 1.277514399 1.5477369 1.036601164 1 13.48010547 -14.52287875 0.08400473 0.232330901 1.492578285 0.297006909 0.141124537 370.2926144 2.178306715 53.64822739 4.437611391 3.00E-15 14.52287875 1.260247384 GPSPAAAS(ph)PEGSPLR ddPTM_A459_MK2206_30min_R2 2 GPSPAAASPEGSPLR 15 0 Q9P107;Q9P107-2 Q9P107 GMIP GEM-interacting protein 1 GPS(0.001)PAAAS(0.999)PEGSPLR;GPS(0.037)PAAAS(0.926)PEGS(0.038)PLR 140.49 0.00038932 10039200 18826.5 23197.1 19377.3 30168 26007 31497 21378 17608.7 22638 22244 TRUE FALSE 20267.87132 22045.16575 20023.32951 27703.1779 24985.83451 32695.64041 18571.04292 19910.21755 24607.01232 21518.1801 0.941895236 1.024490252 0.930530808 1.287431268 1.161149985 1.519442641 0.863039664 0.925274231 1.143545235 1 14.39326845 GPSPAPASS(ph)PK ddPTM_A459_MK2206_30min_R1 2 GPSPAPASSPK 11 0 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 GPSPAPAS(0.317)S(0.683)PK;GPSPAPAS(0.398)S(0.602)PK 138.42 0.0012521 30363000 11267.3 13832.5 12591.1 10677.3 8893.2 7772.5 9777.3 8995 10544.6 10513.6 TRUE FALSE 10308.95697 12932.00174 11736.45121 11499.6675 8538.965012 8212.572233 9125.074157 8916.357663 11640.7489 11816.10414 0.872449738 1.094438707 0.993258952 0.973219883 0.722654854 0.695032147 0.772257425 0.754593693 0.98515964 1 13.52846683 -6.171960717 6.334242333 0.800882821 0.994318266 0.334955583 0.109083988 0.240928829 14.14047082 0.031921108 0.041394186 6.73E-07 6.171960717 0.193435445 GPSPAPASS(ph)PK ddPTM_A459_MK2206_30min_R2 2 GPSPAPASSPK 11 0 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 GPSPAPAS(0.016)S(0.984)PK;GPSPAPAS(0.064)S(0.936)PK 128.57 0.0027519 27856000 251228 225463 217098 185901 204013 122883 264583 195016 171095 230914 TRUE FALSE 270462.2088 214266.8353 224335.939 170712.2936 196002.4245 127559.3987 229842.9343 220505.2608 185976.5338 223379.2951 1.210775639 0.959206336 1.004282599 0.764226127 0.87744222 0.571043966 1.028935713 0.987133838 0.832559409 1 17.76913594 -4.433009042 1.180500847 0.866642089 1.636111144 0.365094451 0.131251538 3.483669699 2.387469626 0.040451499 4.019531617 3.69E-05 4.433009042 0.769469055 GPSPAPASS(ph)PKR ddPTM_A459_MK2206_30min_R1 3 GPSPAPASSPKR 12 1 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 GPS(0.081)PAPAS(0.211)S(0.709)PKR;GPS(0.003)PAPAS(0.031)S(0.965)PKR;GPSPAPAS(0.006)S(0.994)PKR 141.34 0.0017952 11745700 10681.5 11102.8 11220.5 8596.8 9178.3 8626.6 9831.1 9288.3 8890 8145.3 TRUE FALSE 9772.982334 10380.0057 10458.88372 9258.927026 8812.708876 9115.030637 9175.285257 9207.093372 9814.147313 9154.401258 1.067571986 1.133881442 1.142497846 1.011418089 0.962674524 0.995699269 1.002281307 1.005755932 1.072068728 1 13.16024981 -5.772222436 24.12993689 1.004837655 1.116573521 0.711433407 0.031349842 69.29823767 155073.4601 0.009059182 0.013602536 1.69E-06 5.772222436 0.111735865 GPSPEGSS(ph)STESSPEHPPK ddPTM_A459_MK2206_30min_R1 1 GPSPEGSSSTESSPEHPPK 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GPS(0.02)PEGS(0.211)S(0.707)S(0.027)T(0.035)ESSPEHPPK 129.98 0.00019641 5252200 3607.3 2070 2937.6 1544.8 4196.4 4313 3863.5 3809.8 2429.3 2451.4 TRUE FALSE 3300.480192 1935.242624 2738.203897 1663.780764 4029.248502 4557.198333 3605.772964 3776.49132 2681.834428 2755.097939 1.197953853 0.702422443 0.993868079 0.603891695 1.462470152 1.654096672 1.308763987 1.37072852 0.973408019 1 11.42788789 -6.27204316 24.98369041 1.332099571 0.870764189 0.416099405 0.241543524 636.5129888 1499692.838 0.073959488 0.084721919 5.35E-07 6.27204316 -0.461335382 GPSPRPPATAYDAPAS(ph)AFGSSLLGSGGSAFAPPLR ddPTM_A459_MK2206_30min_R1 1 GPSPRPPATAYDAPASAFGSSLLGSGGSAFAPPLR 35 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 GPS(0.261)PRPPAT(0.103)AY(0.193)DAPAS(0.396)AFGS(0.028)S(0.015)LLGS(0.003)GGS(0.001)AFAPPLR 40.918 0.030212 9827400 409.13 512.69 479.67 478.89 495.14 371.75 562.67 446.12 533.7 514.43 TRUE FALSE 374.3313451 479.3137878 447.1113368 515.7741908 475.4175253 392.7981637 525.1353109 442.2196199 589.1800249 578.1614721 0.647451211 0.829031008 0.773332985 0.892093672 0.822291952 0.679391801 0.908284859 0.76487217 1.019057916 1 9.175328663 -8.264825508 24.91092576 1.009528996 0.795155839 0.558959307 0.078020464 211.3534399 1554835.412 0.063487126 0.018957082 5.43E-09 8.264825508 -0.214373156 GPSQATS(ph)PIR ddPTM_A459_MK2206_30min_R2 1 GPSQATSPIR 10 0 Q7RTP6;J3QR21;J3QLA3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 GPSQAT(0.006)S(0.994)PIR 103.43 0.01423 15048000 77775 91884 77442 91126 79835 93181 107920 77745 67360 96045 TRUE FALSE 83729.5138 87321.17417 80023.87763 83680.7143 76700.27676 96727.06825 93749.97436 87906.53844 73218.85104 92911.05952 0.901179195 0.939836168 0.861295502 0.900653967 0.825523648 1.041071631 1.009029225 0.946136433 0.788053128 1 16.50356272 -6.750075061 24.99928797 0.95675232 0.888180634 0.208546622 0.069229091 395.9678574 871050.6695 0.023820064 0.023617753 1.78E-07 6.750075061 -0.068571686 GPSQEEEDNHS(ph)DEEDR ddPTM_A459_MK2206_30min_R1 2 GPSQEEEDNHSDEEDR 16 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPSQEEEDNHS(1)DEEDR;GPSQEEEDNHS(1)DEEDR 148.69 0.0001858 6386400 933.79 719.9 780.73 760.98 860.6 584.85 983.23 770.91 1020.04 1160.31 TRUE FALSE 854.366257 673.0343792 727.7362228 819.5908115 826.3204796 617.9637016 917.6405207 764.1700151 1126.076808 1304.057963 0.655159726 0.516107718 0.55805512 0.628492624 0.633653184 0.47387748 0.703680777 0.585993903 0.863517451 1 10.34879228 -8.403151809 2.387738844 1.001369094 0.589341713 0.819604094 0.06466784 0.10387017 1.195006288 0.059275087 0.016396055 3.95E-09 8.403151809 -0.412027381 GPSQEEEDNHS(ph)DEEDR ddPTM_A459_MK2206_30min_R2 2 GPSQEEEDNHSDEEDR 16 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPSQEEEDNHS(1)DEEDR;GPSQEEEDNHS(1)DEEDR 109.42 0.0019665 4976300 4964.23 6048.6 5385 8546.1 4998.65 7947.9 7891.5 8186.4 3631.9 8380.4 TRUE FALSE 5344.295266 5748.235319 5564.533212 7847.856292 4802.377885 8250.362904 6855.336571 9256.390588 3947.796097 8106.948234 0.659224052 0.709050453 0.686390618 0.968040755 0.592378013 1.01769034 0.845612476 1.141784839 0.486964513 1 12.98494322 -5.555554946 0.708988923 0.887783803 0.619817633 0.139117282 0.189122182 2.51457572 1.872211547 0.089373655 0.463672709 2.78E-06 5.555554946 -0.26796617 GPSQEEEDNHS(ph)DEEDRASEPK ddPTM_A459_MK2206_30min_R1 2 GPSQEEEDNHSDEEDRASEPK 21 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPSQEEEDNHS(1)DEEDRASEPK;GPSQEEEDNHS(0.999)DEEDRAS(0.001)EPK 126.86 3.54E-05 12597500 3470.1 3725 4130.4 3351 3452.9 3076.5 3635 3687.6 3099.8 2728.5 TRUE FALSE 3174.949773 3482.501823 3850.039956 3609.094601 3315.363681 3250.688771 3392.515782 3655.359702 3422.035303 3066.527179 1.035356802 1.135650076 1.255504918 1.176932207 1.081146029 1.060055425 1.106305467 1.192019339 1.115931835 1 11.58239002 -6.261185949 24.99940872 1.101237725 1.157249072 0.140306758 0.067968755 52.02170315 5131883.898 0.021709299 0.026351781 5.48E-07 6.261185949 0.056011347 GPSQEEEDNHS(ph)DEEDRASEPK ddPTM_A459_MK2206_30min_R2 4 GPSQEEEDNHSDEEDRASEPK 21 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPSQEEEDNHS(0.999)DEEDRAS(0.001)EPK;GPS(0.002)QEEEDNHS(0.996)DEEDRAS(0.002)EPK;GPSQEEEDNHS(0.995)DEEDRAS(0.005)EPK;GPSQEEEDNHS(1)DEEDRASEPK 91.114 0.00037758 27122300 94689.4 101022.3 100155.6 109840.7 108450.4 111750.1 114010.2 89763 97569.1 107622.4 TRUE FALSE 101938.8933 96005.67948 103494.7377 100866.3634 104192.0924 116002.8284 99040.52379 101495.3323 106055.484 104110.6899 0.979139542 0.922150065 0.99408368 0.96883772 1.000781884 1.114225912 0.951300235 0.974879068 1.018680061 1 16.66775868 -6.28598833 4.574290476 1.011420367 0.964514636 0.200716835 0.043178135 0.349423081 18.87504849 0.014015291 0.016672096 5.18E-07 6.28598833 -0.046905731 GPSQEEEDNHSDEEDRAS(ph)EPK ddPTM_A459_MK2206_30min_R1 1 GPSQEEEDNHSDEEDRASEPK 21 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPSQEEEDNHS(0.267)DEEDRAS(0.733)EPK 102.47 0.00011708 26178000 2518 2937.6 2857.1 2846.6 2407.2 2249.4 2225 2455.6 2384.5 2523.5 TRUE FALSE 2303.830877 2746.361706 2663.168012 3065.845625 2311.316127 2376.759084 2076.57431 2434.130948 2632.377308 2836.130231 0.812314911 0.968348236 0.939014712 1.080996067 0.814954159 0.838028895 0.73218581 0.858257819 0.928158122 1 11.46970807 -6.324255099 24.99935459 0.847161306 0.950672203 0.176704245 0.089977114 327.1315991 130190.6608 0.027778206 0.03149753 4.74E-07 6.324255099 0.103510897 GPSS(ph)PPTTTAPMR ddPTM_A459_MK2206_30min_R1 1 GPSSPPTTTAPMR 13 0 Q9NXL9-4;Q9NXL9 Q9NXL9-4 MCM9 DNA helicase MCM9 1 GPS(0.264)S(0.664)PPT(0.002)T(0.056)T(0.014)APMR 82.705 0.032505 11053000 6621.5 6953.3 7386.7 6315.6 5957.9 5359.3 6449.2 6495.6 6495 6072.6 TRUE FALSE 6058.306654 6500.638906 6885.311385 6802.028606 5720.584227 5662.738935 6018.985635 6438.809654 7170.178493 6824.919534 0.887674444 0.952485795 1.008848727 0.996645978 0.838190721 0.829715121 0.881913055 0.943426457 1.05058799 1 12.73659632 -8.121987348 4.628622439 1.023545002 0.915669121 0.366401073 0.057716163 0.285950399 9.259060998 0.048059955 0.01709295 7.55E-09 8.121987348 -0.107875881 GPSS(ph)PPTTTAPMR ddPTM_A459_MK2206_30min_R2 1 GPSSPPTTTAPMR 13 0 Q9NXL9-4;Q9NXL9 Q9NXL9-4 MCM9 DNA helicase MCM9 1 GPS(0.198)S(0.791)PPT(0.004)T(0.004)T(0.003)APMR 92.295 0.018642 8143900 27322 28624 26763 32547 24645 24383 40454 24894 24958 26073 TRUE FALSE 29413.79333 27202.57378 27655.26506 29887.80599 23677.31347 25310.91215 35142.34121 28147.73127 27128.80173 25222.24015 1.16618481 1.078515375 1.096463474 1.18497825 0.938747444 1.003515628 1.393307692 1.115988553 1.075590494 1 14.6224088 GPSS(ph)TGASGQAK ddPTM_A459_MK2206_30min_R2 1 GPSSTGASGQAK 12 0 Q9NWH9;H7BXE3 Q9NWH9 SLTM SAFB-like transcription modulator 1 GPS(0.21)S(0.77)T(0.019)GASGQAK 105.66 0.0092291 1091100 8996.3 5752.3 4189.6 7646.9 6391.2 5962.3 6090 21230 10221 7986.7 TRUE FALSE 9685.063645 5466.649147 4329.279173 7022.123809 6140.249375 6189.199504 5290.375685 24004.83389 11110.0041 7726.094633 1.253552293 0.707556587 0.560345087 0.908884002 0.794741673 0.801077362 0.684741248 3.106981604 1.437984471 1 12.91552363 -7.71061814 24.99984231 1.954373255 0.80404857 0.440255043 0.529346129 76.19925812 37483.55585 0.230459282 0.133055471 1.95E-08 7.71061814 -1.150324684 GPSS(ph)VEDIK ddPTM_A459_MK2206_30min_R1 6 GPSSVEDIK 9 0 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 GPS(0.038)S(0.962)VEDIK;GPS(0.372)S(0.628)VEDIK;GPS(0.111)S(0.889)VEDIK;GPS(0.047)S(0.953)VEDIK;GPS(0.015)S(0.985)VEDIK;GPS(0.114)S(0.886)VEDIK 138.76 0.0024384 245618000 49812.5 54607.3 57861.8 46852.3 44283.1 39186.4 52569 49188.4 48847.7 44894 TRUE FALSE 45575.6853 51052.35484 53934.30223 50460.87226 42519.21036 41405.1001 49062.21793 48758.351 53925.59322 50455.80765 0.903279274 1.011823162 1.068941411 1.000100377 0.842702007 0.820621095 0.972379994 0.966357557 1.068768804 1 15.62273272 -8.099415162 4.468733352 1.033530318 0.947500687 0.184116844 0.073318311 0.454111402 14.83056097 0.060263185 0.021501574 7.95E-09 8.099415162 -0.086029631 GPSS(ph)VEDIK ddPTM_A459_MK2206_30min_R2 5 GPSSVEDIK 9 0 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 GPSS(1)VEDIK;GPS(0.026)S(0.974)VEDIK;GPS(0.383)S(0.617)VEDIK;GPS(0.004)S(0.996)VEDIK;GPS(0.067)S(0.933)VEDIK 143.24 0.0020506 215943000 571785 625197 629285 603486 600501 440299 727689 531193 442050 630758 TRUE FALSE 615561.2992 594150.6261 650265.0478 554179.2633 576922.3135 457054.887 632142.5602 600621.749 480498.71 610176.4181 1.008825122 0.973735806 1.065700064 0.908227927 0.945500836 0.749053673 1.035999658 0.984341137 0.787475058 1 19.2188669 -5.780043636 24.96526403 0.914445401 1.011851877 0.217332755 0.08707529 361.732133 485411.2148 0.024353671 0.036195361 1.66E-06 5.780043636 0.097406476 GPSSSLNT(ph)PGSFR ddPTM_A459_MK2206_30min_R2 2 GPSSSLNTPGSFR 13 0 Q9NXR1;Q9NXR1-1;I3L533;I3L2R9;I3L2R3;I3L2T8;I3L522 Q9NXR1 NDE1 Nuclear distribution protein nudE homolog 1 1 GPSSSLNT(0.989)PGS(0.011)FR;GPSSSLNT(0.995)PGS(0.005)FR 170.74 0.00051418 11459400 33269 45068 39151 45286 44974 49370 46254 32361 39238 40327 TRUE FALSE 35816.10022 42829.98866 40456.2748 41585.98894 43208.09478 51248.80995 40180.79424 36590.69381 42650.85031 39011.13329 0.918099455 1.097891423 1.037044335 1.066003098 1.107583685 1.31369703 1.029982747 0.937955161 1.093299443 1 15.25159829 -4.757398255 24.66081234 1.079457407 0.918099175 0.204188869 0.093249506 174.9666394 1067552.025 0.02457916 0.182341484 1.75E-05 4.757398255 -0.161358232 GPSTPKS(ph)PGASNFSTLPK ddPTM_A459_MK2206_30min_R2 2 GPSTPKSPGASNFSTLPK 18 1 Q9Y4E8 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 GPS(0.001)T(0.002)PKS(0.984)PGAS(0.003)NFS(0.007)T(0.003)LPK;GPS(0.029)T(0.025)PKS(0.87)PGAS(0.048)NFS(0.023)T(0.006)LPK 75.548 0.0084381 19722100 15070.2 57516 40464 56343 78849 58398 59736 34476 73517 29871 TRUE FALSE 16223.9861 54659.83908 41813.04956 51739.59667 75752.99208 60620.37681 51892.59144 38982.13157 79911.37577 28896.31172 0.561455256 1.891585321 1.447002994 1.790525974 2.621545366 2.097858627 1.795820586 1.349034851 2.765452441 1 14.81859774 -4.761303527 22.95668171 1.886821048 0.561451768 0.364658531 0.514104256 1.228505492 205275.006 0.123812603 0.69453279 1.73E-05 4.761303527 -1.32536928 GPSWDPFRDWYPHSR ddPTM_A459_MK2206_30min_R1 1 GPSWDPFRDWYPHSR 15 1 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 0 90.229 0.012568 6989700 6208.5 3214.6 6462.2 6300.2 9805.8 5022.3 7978.3 6632.6 1990 1430.7 FALSE TRUE 5680.434473 3005.328956 6023.563869 6785.442496 9415.214222 5306.658286 7446.082164 6574.611877 2196.867621 1607.945917 3.532727321 1.869048532 3.746123426 4.219944479 5.855429664 3.300271625 4.630803863 4.0888265 1.366257159 1 10.65100317 -5.35665508 10.32255293 3.777135541 2.702079947 0.027770649 1.431010378 1.138929915 116.7430124 0.36503952 0.760640724 4.40E-06 5.35665508 -1.075055594 GPTS(ph)SPCEEEGDEGEEDRTSDLR ddPTM_A459_MK2206_30min_R1 1 GPTSSPCEEEGDEGEEDRTSDLR 23 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.124)S(0.482)S(0.394)PCEEEGDEGEEDRTSDLR 89.201 0.00010734 7375700 1093.8 1073.7 988.58 1037.1 855.53 1117.9 1203.9 1143.3 958.85 1013 TRUE FALSE 1000.766566 1003.801935 921.4779439 1116.977622 821.4524285 1181.194532 1123.590028 1133.304249 1058.525889 1138.498088 0.879023493 0.88168961 0.809380318 0.981097495 0.721522888 1.037502429 0.986905503 0.99543799 0.929756405 1 10.15291615 -6.791987011 24.99999992 0.989446925 0.860572538 0.513160132 0.06579831 168.471573 137874.9794 0.021767706 0.019199546 1.61E-07 6.791987011 -0.128874387 GPTS(ph)SPCEEEGDEGEEDRTSDLR ddPTM_A459_MK2206_30min_R2 1 GPTSSPCEEEGDEGEEDRTSDLR 23 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.111)S(0.488)S(0.401)PCEEEGDEGEEDRTSDLR 97.352 0.001668 0 13287 12772 11893 9071.7 12806 12176 13490 12553 11039 13600 TRUE FALSE 14304.26294 12137.76105 12289.50668 8330.513091 12303.1721 12639.36621 11718.7468 14193.7202 11999.15227 13156.23311 1.087261286 0.922586347 0.934120472 0.633198957 0.935159174 0.960713154 0.890737242 1.078858977 0.912050749 1 13.68345886 -7.727786239 24.99809516 0.996591283 0.902965653 0.111908142 0.112490884 395.8191578 294020.9112 0.054851726 0.031666342 1.87E-08 7.727786239 -0.09362563 GPTSS(ph)PCEEEGDEGEEDR ddPTM_A459_MK2206_30min_R1 2 GPTSSPCEEEGDEGEEDR 18 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.092)S(0.027)S(0.882)PCEEEGDEGEEDR;GPT(0.009)S(0.062)S(0.929)PCEEEGDEGEEDR 354.71 4.82E-184 5068600 1346.79 1246.85 1353.85 1005.3 1156.48 1121.46 1626.65 1025.35 1363.36 1880.31 TRUE FALSE 1232.238438 1165.679838 1261.954434 1082.72838 1110.414953 1184.956096 1518.139146 1016.385473 1505.086151 2113.256998 0.583099187 0.551603444 0.597160892 0.512350548 0.525451923 0.560725031 0.718388321 0.480956871 0.712211601 1 11.04525251 -8.591020159 4.3943012 0.999912583 0.569199784 0.826990441 0.060611348 0.12950207 6.900246431 0.057457194 0.014999166 2.56E-09 8.591020159 -0.430712799 GPTSS(ph)PCEEEGDEGEEDR ddPTM_A459_MK2206_30min_R2 2 GPTSSPCEEEGDEGEEDR 18 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.024)S(0.137)S(0.84)PCEEEGDEGEEDR;GPT(0.002)S(0.049)S(0.949)PCEEEGDEGEEDR 203.05 9.27E-11 7577300 16112 9886.7 11971.9 14531.4 10690.9 11649.7 12781.4 10204.1 9679.7 13860.1 TRUE FALSE 17345.54711 9395.740855 12371.03717 13344.13814 10271.12155 12093.0375 11103.18683 11537.81091 10521.62281 13407.84607 1.293686325 0.700764374 0.922671479 0.995248459 0.766053063 0.901937375 0.82811115 0.860526802 0.784736247 1 13.71078987 -4.747919312 24.99851879 0.861084232 1.293687386 0.664959755 0.091874696 397.1968196 734371.8588 0.021747267 0.42151273 1.79E-05 4.747919312 0.432603154 GPTSS(ph)PCEEEGDEGEEDRTSDLR ddPTM_A459_MK2206_30min_R2 1 GPTSSPCEEEGDEGEEDRTSDLR 23 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.033)S(0.16)S(0.807)PCEEEGDEGEEDRTSDLR 131.33 8.22E-06 0 7727.1 5613.4 5606.8 12244 7120.5 7051.5 8476.5 5905 7982 10093 TRUE FALSE 8318.692717 5334.646719 5793.727914 11243.62603 6840.913392 7319.849774 7363.525368 6676.803775 8676.259932 9763.666237 0.852005027 0.546377415 0.59339676 1.151578286 0.700650066 0.74970299 0.754176268 0.68384187 0.888627256 1 13.25320726 -14.52287875 0.206564631 2.123846968 0.727846408 0.167946832 0.160223894 275.4652592 2.732412337 127.8494665 0.363695722 3.00E-15 14.52287875 -1.39600056 GPTSS(ph)PCEEEGDEGEEDRTSDLRDEASSVTR ddPTM_A459_MK2206_30min_R2 1 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.12)S(0.264)S(0.6)PCEEEGDEGEEDRT(0.005)S(0.011)DLRDEASSVTR 43.995 0.013452 7150300 7877.9 8219.9 10601 13443 14317 11451 12955 11843 10130 13151 TRUE FALSE 8481.038081 7811.711719 10954.43205 12344.6639 13754.84264 11886.77583 11253.99294 13390.92076 11011.08909 12721.88395 0.66664954 0.614037335 0.861069956 0.970348727 1.081195419 0.934356568 0.884616853 1.052589445 0.865523466 1 13.63502471 -5.422984272 2.946667173 0.970690093 0.637449024 0.800081161 0.064937255 0.106641183 1.760838592 0.017788798 0.04276677 3.78E-06 5.422984272 -0.333241069 GPTSTSIDNIDGT(ph)PVRDER ddPTM_A459_MK2206_30min_R1 3 GPTSTSIDNIDGTPVRDER 19 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 GPTSTSIDNIDGT(1)PVRDER;GPTSTSIDNIDGT(1)PVRDER;GPTSTSIDNIDGT(1)PVRDER 188.1 2.69E-14 106806000 10260 9455.7 8455.9 8585.2 10257.4 9449.1 10022.7 8449.4 7800 6590.8 TRUE FALSE 9387.333123 8840.132211 7881.937067 9246.433592 9848.826038 9984.099876 9354.10397 8375.527787 8610.837913 7407.318062 1.267305257 1.193432243 1.064074339 1.248283591 1.329607552 1.347869741 1.262819268 1.130709889 1.16247714 1 12.85473557 -8.523554441 1.259183641 1.005798917 1.23955215 0.459986874 0.078528148 0.50157146 1.745234417 0.084284056 0.025997801 3.00E-09 8.523554441 0.233753233 GPTSTSIDNIDGT(ph)PVRDER ddPTM_A459_MK2206_30min_R2 4 GPTSTSIDNIDGTPVRDER 19 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 GPTSTS(0.001)IDNIDGT(0.999)PVRDER;GPTSTS(0.002)IDNIDGT(0.998)PVRDER;GPTSTSIDNIDGT(1)PVRDER;GPTSTSIDNIDGT(1)PVRDER 212.47 9.66E-16 63560000 163040 205718 166501 205480 192280 222586 192459 153903 176404 187762 TRUE FALSE 175522.4678 195502.3433 172052.0602 188691.6267 184730.1211 231056.6662 167188.9021 174018.6505 191747.3011 181635.3413 0.966345352 1.076345285 0.947238896 1.038848637 1.017038423 1.272090908 0.920464602 0.958066031 1.055671763 1 17.47068541 -4.729751794 23.01716166 1.031595022 0.966344259 0.042585337 0.093035339 5917.984245 4298041.532 0.02335335 2.668162838 1.86E-05 4.729751794 -0.065250762 GPTTGEGALDLSDVHS(ph)PPKS(ph)PEGK ddPTM_A459_MK2206_30min_R2 1 GPTTGEGALDLSDVHSPPKSPEGK 24 1 O95684;O95684-2 O95684 FGFR1OP FGFR1 oncogene partner 2 GPTTGEGALDLS(0.001)DVHS(0.999)PPKS(1)PEGK 83.167 0.00011948 3372900 12804 13131 14431 10052 11684 5393.1 19197 12992 9647.8 15085 TRUE FALSE 13784.28408 12478.93363 14912.12234 9230.719445 11225.22745 5598.3382 16676.41084 14690.09901 10486.9482 14592.77769 0.944596319 0.855144504 1.021883747 0.632553969 0.769231718 0.383637599 1.142785233 1.006669143 0.71863962 1 13.8329669 -10.41576215 11.48471193 1.000001531 0.830509749 0.056190708 0.208313673 0 0 0.206500041 0.050083616 3.84E-11 10.41576215 -0.169491782 GPVEGYEENEEFLR ddPTM_A459_MK2206_30min_R1 2 GPVEGYEENEEFLR 14 0 F5GYQ2;Q9UI30-2;Q9UI30;F5GX77 F5GYQ2 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein 0 ; 138.89 0.0073746 4051800 1021.44 777.97 1048.91 1044.56 989.27 968.18 1330 1012.93 826.4 706.16 FALSE TRUE 934.5611642 727.3240116 977.7129116 1125.012192 949.8652811 1022.997515 1241.278127 1004.07406 912.3072373 793.644432 1.177556506 0.9164356 1.231928143 1.417526725 1.196839848 1.288987201 1.564022976 1.265143456 1.149516333 1 9.632348987 -5.446009589 6.693572195 1.292642761 1.050125416 0.232692547 0.154764926 0.299560121 21.75648472 0.039706665 0.083060725 3.58E-06 5.446009589 -0.242517345 GPVEGYEENEEFLR ddPTM_A459_MK2206_30min_R2 2 GPVEGYEENEEFLR 14 0 F5GYQ2;Q9UI30-2;Q9UI30;F5GX77 F5GYQ2 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein 0 ; 163.71 0.0036847 7255100 10912.4 15184.5 11864.7 13977.5 13855.1 16165.1 13708.4 13108.5 11648.5 14717.3 FALSE TRUE 11747.86173 14430.45981 12260.26318 12835.49354 13311.07916 16780.27421 11908.47061 14821.82596 12661.66547 14237.07571 0.825159743 1.013583134 0.861150382 0.901554069 0.934958796 1.178632084 0.836440773 1.041072357 0.889344535 1 13.79736523 -6.534917402 24.99928495 0.990420716 0.907224234 0.159477756 0.096025431 438.4627963 910498.7629 0.030177665 0.030198627 2.92E-07 6.534917402 -0.083196482 GPVGTVS(ph)EAQLAR ddPTM_A459_MK2206_30min_R1 1 GPVGTVSEAQLAR 13 0 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;Q9NZM1-8;Q9NZM1-7 Q9NZM1-5 MYOF Myoferlin 1 GPVGT(0.058)VS(0.942)EAQLAR 125.47 0.0021254 9596200 1065 776 874.83 1080.5 1128 1041.5 1052.4 955.29 1107.3 963.28 TRUE FALSE 974.4161575 725.482259 815.448977 1163.720297 1083.069371 1100.46883 982.1963162 946.9380002 1222.407798 1082.618399 0.90005505 0.670118169 0.753219212 1.074912729 1.000416557 1.016488202 0.907241478 0.874673847 1.12912158 1 10.0803091 -5.750053999 24.99820998 0.991974302 0.764029457 0.587144696 0.086488731 150.8788038 331272.6922 0.023425889 0.040123701 1.78E-06 5.750053999 -0.227944845 GPVGTVS(ph)EAQLAR ddPTM_A459_MK2206_30min_R2 2 GPVGTVSEAQLAR 13 0 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;Q9NZM1-8;Q9NZM1-7 Q9NZM1-5 MYOF Myoferlin 1 GPVGT(0.079)VS(0.921)EAQLAR;GPVGT(0.008)VS(0.992)EAQLAR 121.18 0.0028905 11292100 21606 23329 18890.9 21131 22148.6 19508.4 28524 15653.6 17819.4 19278.3 TRUE FALSE 23260.17197 22170.51578 19520.71318 19404.52971 21278.93468 20250.80583 24778.76454 17699.57927 19369.2992 18649.25065 1.247244321 1.188815369 1.046729091 1.040499164 1.14100749 1.085877723 1.328673468 0.949077236 1.038610053 1 14.18683004 -1.522878877 0.077199391 0.89166327 1.658425914 0.215072164 0.099537113 382.0992546 2.16681824 3.385736517 31.38649313 0.029999991 1.522878877 0.766762644 GPVRS(ph)EDESVEAK ddPTM_A459_MK2206_30min_R1 2 GPVRSEDESVEAK 13 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GPVRS(1)EDESVEAK;GPVRS(1)EDESVEAK 161.82 0.0017257 12790300 2872.2 3032.1 2700.6 2554.9 2315.48 2387.1 3071.9 2606.58 3279.9 3055.6 TRUE FALSE 2627.904307 2834.709739 2517.290796 2751.678841 2223.249528 2522.255539 2866.979156 2583.790946 3620.857342 3434.150797 0.765226824 0.825447078 0.733016966 0.801269077 0.647394264 0.734462663 0.8348437 0.752381331 1.054367603 1 11.74573768 -8.259128509 24.99713389 1.027183826 0.761951976 0.805681182 0.052141421 80.18241098 867374.5374 0.040248874 0.013556592 5.51E-09 8.259128509 -0.26523185 GPVRS(ph)EDESVEAK ddPTM_A459_MK2206_30min_R2 1 GPVRSEDESVEAK 13 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GPVRS(0.999)EDES(0.001)VEAK 77.505 0.023635 10264000 33460 25553 25849 33321 26745 23845 34924 26209 18060 32406 TRUE FALSE 36021.72333 24284.07518 26710.79276 30598.56771 25694.85692 24752.43818 30338.43685 29634.60629 19630.82615 31348.59487 1.14906979 0.774646369 0.852057097 0.976074616 0.819649398 0.789586847 0.967776609 0.945324867 0.62621072 1 14.93611316 -4.750385655 24.94548091 0.862639034 1.149070423 0.382034987 0.109801784 501.0095311 1130577.839 0.026297865 0.389571499 1.78E-05 4.750385655 0.28643139 GPVS(ph)PSVSFQPLAR ddPTM_A459_MK2206_30min_R1 3 GPVSPSVSFQPLAR 14 0 Q7Z434-4;Q7Z434 Q7Z434-4 MAVS Mitochondrial antiviral-signaling protein 1 GPVS(0.976)PS(0.024)VSFQPLAR;GPVS(0.805)PS(0.118)VS(0.077)FQPLAR;GPVS(0.914)PS(0.086)VSFQPLAR 201.3 6.02E-05 66404000 5055.6 3968.9 3354.83 3092.33 4654 3703.71 4643.8 3547.93 4026.57 3836.88 TRUE FALSE 4625.594672 3710.523889 3127.113487 3330.501792 4468.621325 3913.41086 4334.020575 3516.910822 4445.146361 4312.221661 1.072670896 0.860466873 0.725174569 0.772340119 1.03626893 0.907516164 1.005055147 0.815568192 1.030825108 1 12.07421562 -6.259975523 24.99583007 0.955692005 0.848399918 0.19801878 0.104835971 233.2814694 3983352.076 0.032410348 0.039570531 5.50E-07 6.259975523 -0.107292087 GPVSGS(ph)PDSMNASR ddPTM_A459_MK2206_30min_R1 1 GPVSGSPDSMNASR 14 0 A0A499FJS7;O14920-4;O14920-2;O14920 A0A499FJS7 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta 1 GPVS(0.008)GS(0.932)PDS(0.06)MNASR 189.33 9.68E-05 4517100 1887 2076.8 2133.9 1772.9 2056.7 2078.6 2424.8 1751.6 2063.8 2384.6 TRUE FALSE 1726.500741 1941.599943 1989.056813 1909.449065 1974.777284 2196.288536 2263.046016 1736.285946 2278.339395 2680.022251 0.644211346 0.724471576 0.742179216 0.712475079 0.736851078 0.819503844 0.844413145 0.647862511 0.850119582 1 11.38802926 -14.52287875 0.134110554 1.857361565 0.648172946 0.664514155 0.059423099 90.79881783 0.756435902 20.84193287 0.421074423 3.00E-15 14.52287875 -1.209188619 GPVSGS(ph)PDSMNASR ddPTM_A459_MK2206_30min_R2 4 GPVSGSPDSMNASR 14 0 A0A499FJS7;O14920-4;O14920-2;O14920 A0A499FJS7 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta 1 GPVS(0.002)GS(0.675)PDS(0.323)MNASR;GPVS(0.007)GS(0.847)PDS(0.146)MNASR;GPVS(0.323)GS(0.663)PDS(0.014)MNASR;GPVS(0.018)GS(0.667)PDS(0.316)MNASR 179.55 7.28E-05 58432000 153085 167885 139273 177037 164305 174721 181864 129136 140908 164411 TRUE FALSE 164805.3053 159548.075 143916.2923 162572.5108 157853.5601 181370.1301 157985.0383 146014.5186 153163.9231 159046.2825 1.036209729 1.003155009 0.90487052 1.022171083 0.992500784 1.1403607 0.993327451 0.918063071 0.963014795 1 17.27908713 -7.53304481 24.31317788 0.955462377 1.014757872 0.161354823 0.056952427 287.1811982 686809.2547 0.028139126 0.016271368 2.93E-08 7.53304481 0.059295495 GPVSGSPDS(ph)MNASR ddPTM_A459_MK2206_30min_R2 1 GPVSGSPDSMNASR 14 0 A0A499FJS7;O14920-4;O14920-2;O14920 A0A499FJS7 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta 1 GPVS(0.001)GS(0.185)PDS(0.814)MNASR 113.54 0.012378 3797800 25729 25309 23361 29737 27917 26613 30368 21477 27362 24105 TRUE FALSE 27698.83202 24052.19186 24139.84408 27307.39198 26820.83831 27625.77636 26380.64512 24284.11764 29741.8973 23318.45582 1.187850183 1.031465893 1.035224813 1.171063478 1.150197874 1.184717229 1.131320415 1.041411911 1.275465988 1 14.50918463 -5.769356044 24.99927403 1.140424087 1.079508853 0.074208018 0.081758648 394.0997008 1244491.662 0.021892669 0.033142504 1.70E-06 5.769356044 -0.060915233 GPVSGTEPEPVYS(ph)MEAADYR ddPTM_A459_MK2206_30min_R1 1 GPVSGTEPEPVYSMEAADYR 20 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 GPVSGTEPEPVYS(1)MEAADYR 98.391 0.00088043 5074000 1333.9 1151 1049.8 908.51 1056.1 1020.1 1031.2 724.33 719.51 723 TRUE FALSE 1220.4448 1076.069691 978.5425009 978.4835976 1014.033301 1077.85718 962.4105295 717.9972592 794.3056393 812.5706984 1.501955218 1.324278236 1.204255215 1.204182725 1.247932399 1.326478032 1.184402208 0.883612048 0.977521883 1 9.666349531 -7.611107287 4.149463806 0.949655501 1.289391604 0.766900419 0.085372967 0.110984788 3.572747292 0.045564894 0.025168812 2.45E-08 7.611107287 0.339736103 GPVSGTEPEPVYS(ph)MEAADYR ddPTM_A459_MK2206_30min_R2 1 GPVSGTEPEPVYSMEAADYR 20 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 GPVSGTEPEPVY(0.334)S(0.641)MEAADY(0.025)R 58.672 0.034754 3806500 10328 10146 12117 14258 10713 12244 10933 10186 12940 10959 TRUE FALSE 11118.71962 9642.164394 12520.97473 13093.07579 10292.35379 12709.954 9497.483967 11517.34517 14065.49781 10601.40873 1.048796429 0.909517277 1.181067069 1.235031695 0.970847748 1.198892933 0.895869993 1.086397617 1.326757431 1 13.37196836 -5.260979907 24.998733 1.109701194 0.979156856 0.147098067 0.127730271 75.70288798 4118474.73 0.032692468 0.076352449 5.48E-06 5.260979907 -0.130544338 GPVSPS(ph)VSFQPLAR ddPTM_A459_MK2206_30min_R2 1 GPVSPSVSFQPLAR 14 0 Q7Z434-4;Q7Z434 Q7Z434-4 MAVS Mitochondrial antiviral-signaling protein 1 GPVS(0.327)PS(0.544)VS(0.129)FQPLAR 75.589 0.043977 34343000 27190 17564 16785 16087 16271 18874 22405 14336 19267 17127 TRUE FALSE 29271.68731 16691.7973 17344.60352 14772.64064 15632.11878 19592.2633 19463.19659 16209.76442 20942.80883 16568.14739 1.766744743 1.00746311 1.046864391 0.891628997 0.943504329 1.182525893 1.174735843 0.978369159 1.264040471 1 14.01612467 -4.759237479 24.99992483 1.052657003 1.766745662 0.785578281 0.111653041 26.8306054 304557.8223 0.028599626 0.184309083 1.74E-05 4.759237479 0.714088659 GQDVVQEWQET(ph)SPTREEPAGEQK ddPTM_A459_MK2206_30min_R1 1 GQDVVQEWQETSPTREEPAGEQK 23 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GQDVVQEWQET(0.563)S(0.428)PT(0.01)REEPAGEQK 76.294 0.0011802 16672000 3442.1 3790.9 3340.6 3498.6 3137.9 3086.7 3133.2 3172.1 3260.8 2316.8 TRUE FALSE 3149.33132 3544.111721 3113.849379 3768.062778 3012.910798 3261.466287 2924.189945 3144.366664 3599.771829 2603.822675 1.209502993 1.361118695 1.195876128 1.447127262 1.157110593 1.252568509 1.123037284 1.207596314 1.382495 1 11.34641549 -6.366140032 24.33528714 1.197580942 1.300166369 0.198786563 0.113119516 48.0291014 11141.80201 0.033309437 0.037769353 4.30E-07 6.366140032 0.102585427 GQDVVQEWQETS(ph)PTR ddPTM_A459_MK2206_30min_R2 1 GQDVVQEWQETSPTR 15 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GQDVVQEWQET(0.239)S(0.715)PT(0.046)R 92.427 0.013515 2650700 15999 14569 13268 12959 9303.5 11118 13706 11365 9767 14562 TRUE FALSE 17223.89574 13845.52465 13710.3485 11900.20825 8938.197844 11541.10328 11906.38574 12850.44452 10616.51601 14086.84313 1.222693799 0.982869229 0.973273314 0.844774669 0.634506806 0.819282445 0.845213198 0.912230256 0.753647635 1 13.78206072 -4.763026042 1.103366051 0.822264012 1.413218585 0.605308648 0.095480026 1.199589304 1.169179526 0.030714058 0.840559391 1.73E-05 4.763026042 0.590954573 GQDVVQEWQETSPT(ph)REEPAGEQK ddPTM_A459_MK2206_30min_R1 1 GQDVVQEWQETSPTREEPAGEQK 23 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GQDVVQEWQET(0.091)S(0.204)PT(0.704)REEPAGEQK 58.758 0.018984 12203000 1468.4 1314.4 1554.3 1119.9 1326.4 1022.9 1309.8 1488 1409.3 1015.6 TRUE FALSE 1343.504869 1228.832321 1448.798447 1206.154892 1273.566679 1080.815714 1222.425632 1474.990573 1555.801778 1141.420195 1.177046695 1.076581899 1.269294562 1.056714168 1.115773739 0.94690432 1.070968988 1.292241524 1.363040346 1 10.15661428 -7.757292853 24.99382614 1.245730712 1.100196983 0.160009706 0.117410502 149.3709562 900374.6756 0.056868964 0.031309968 1.75E-08 7.757292853 -0.145533729 GQFSTDELVAEVEKR ddPTM_A459_MK2206_30min_R1 1 GQFSTDELVAEVEKR 15 1 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 120.59 0.0024005 4660000 5027.6 5746.3 5533.6 4491.2 4302.9 3597.2 3564.8 4365.3 4239.1 3821.5 FALSE TRUE 4599.976219 5372.214826 5157.994649 4837.113002 4131.506381 3800.870355 3326.998696 4327.134642 4679.769615 4294.936271 1.071023161 1.250825271 1.200947889 1.126236269 0.961948239 0.884965484 0.774632844 1.007496822 1.089601642 1 12.06842101 -6.207099379 3.156966509 0.938793335 1.179849984 0.573304732 0.088681679 0.187530398 3.737494398 0.02974439 0.038516692 6.21E-07 6.207099379 0.241056649 GQFSTDELVAEVEKR ddPTM_A459_MK2206_30min_R2 1 GQFSTDELVAEVEKR 15 1 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 92.952 0.017554 4142200 22789 20106 14148 24840 18399 18708 22309 13542 17452 18056 FALSE TRUE 24533.74336 19107.56528 14619.68726 22810.49254 17676.56281 19419.94605 19379.8015 15311.9859 18969.94341 17466.8342 1.404590155 1.093934084 0.836996968 1.305931704 1.012007248 1.111818308 1.109519978 0.876632006 1.086055046 1 14.09233053 -4.77669266 4.658470623 1.04622597 1.427205651 0.431101622 0.123892902 0.167149905 8.351661021 0.029997442 0.2058627 1.67E-05 4.77669266 0.380979681 GQGESDPLDHEPAVS(ph)PLLPR ddPTM_A459_MK2206_30min_R1 4 GQGESDPLDHEPAVSPLLPR 20 0 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR 166.36 2.26E-09 136222000 7973 6065.09 7091.5 5569.84 9757.3 8259.8 8653.2 7517.1 6404.9 5966.45 TRUE FALSE 7294.854482 5670.251539 6610.148738 5998.830042 9368.64608 8727.462738 8075.960817 7451.378787 7070.712275 6705.61887 1.087871921 0.845597051 0.985762666 0.894597525 1.397133696 1.30151488 1.204357267 1.111214182 1.054445893 1 12.71115477 -6.23581902 24.98967196 1.191154227 0.948060491 0.443228895 0.122770774 695.5082264 678387.2721 0.037218452 0.048031392 5.81E-07 6.23581902 -0.243093735 GQGESDPLDHEPAVS(ph)PLLPR ddPTM_A459_MK2206_30min_R2 7 GQGESDPLDHEPAVSPLLPR 20 0 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR 182 1.74E-13 108657000 128915.5 180457.8 137756.5 187727 185567.5 213035 199915 140437.5 186360 161503 TRUE FALSE 138785.3698 171496.5281 142349.233 172389.1036 178281.1875 221142.1962 173665.9204 158793.1634 202569.2559 156233.1703 0.888322048 1.097696012 0.911133229 1.103409111 1.14112251 1.415462515 1.111581619 1.016385721 1.296582893 1 17.25334126 -5.972317568 3.664519138 1.172171905 0.97918224 0.322308306 0.126850642 0.278582417 8.048712321 0.03739716 0.055485681 1.07E-06 5.972317568 -0.192989665 GQGS(ph)SPVAMQK ddPTM_A459_MK2206_30min_R1 3 GQGSSPVAMQK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 GQGS(0.745)S(0.255)PVAMQK;GQGS(0.5)S(0.5)PVAMQK;GQGS(0.616)S(0.384)PVAMQK 201.09 1.88E-05 72637200 23515.9 23421 23953 19981.2 24299.5 20846.3 25168.3 24084.4 21642.5 21899.4 TRUE FALSE 21515.74922 21896.28864 22327.1371 21520.15549 23331.59946 22026.59949 23489.36863 23873.83263 23892.31532 24612.463 0.874181069 0.889642318 0.907147614 0.874360095 0.947958742 0.894936825 0.954368875 0.969989579 0.970740528 1 14.58710142 -7.37236466 0.507600433 1.001603031 0.879618839 0.814164578 0.018611482 0.367179045 0.205427867 0.017436095 0.014443887 4.24E-08 7.37236466 -0.121984191 GQGS(ph)SPVAMQK ddPTM_A459_MK2206_30min_R2 2 GQGSSPVAMQK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 GQGS(0.5)S(0.5)PVAMQK;GQGS(0.5)S(0.5)PVAMQK 179.83 5.12E-05 111894000 225990 233230 205563 240850 246010 210130 265340 187578 193728 223260 TRUE FALSE 243291.9682 221648.1373 212416.3678 221171.7846 236350.4113 218126.6444 230500.5393 212095.0887 210578.1113 215975.0445 1.126481852 1.026267354 0.983522741 1.024061762 1.094341302 1.009962262 1.067255431 0.982035166 0.975011311 1 17.7205051 -4.764192641 5.637438805 1.019938858 1.131092049 0.447484575 0.036155556 0.14186378 15.10711141 0.009365566 0.061323961 1.72E-05 4.764192641 0.111153191 GQGSS(ph)PVAMQK ddPTM_A459_MK2206_30min_R1 1 GQGSSPVAMQK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 GQGS(0.219)S(0.781)PVAMQK 95.183 0.021792 0 2497.5 2675.2 2766.7 2500.9 2408 1915.1 2642.6 2322.6 2506.5 2415.5 TRUE FALSE 2285.07451 2501.043994 2578.904112 2693.519751 2312.084261 2023.531307 2466.316976 2302.293753 2767.059645 2714.750376 0.84172546 0.921279546 0.949959943 0.99217953 0.851674718 0.745383931 0.908487571 0.848068306 1.019268537 1 11.40660383 -8.269189517 24.76832889 1.009634297 0.884841408 0.38350242 0.064493472 666.9288688 2131378.518 0.063347065 0.017584437 5.38E-09 8.269189517 -0.124792889 GQGSS(ph)PVAMQK ddPTM_A459_MK2206_30min_R2 2 GQGSSPVAMQK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 GQGS(0.225)S(0.775)PVAMQK;GQGS(0.05)S(0.95)PVAMQK 190.34 1.98E-05 109217000 195349 193263 193517 215319 227542 184148 230460 162778 146653 190692 TRUE FALSE 210305.0696 183665.8405 199968.7602 197726.7489 218607.5578 191155.8812 200200.3252 184053.6435 159408.6129 184469.7357 1.140051884 0.99564213 1.084019335 1.071865519 1.185059202 1.036245217 1.085274636 0.997744388 0.864145071 1 17.49302462 -7.931656051 3.562623216 0.930263937 1.08334167 0.539059359 0.057603629 0.170102242 4.264305348 0.035988146 0.015022214 1.17E-08 7.931656051 0.153077734 GQGT(ph)PPSGPGVVR ddPTM_A459_MK2206_30min_R1 1 GQGTPPSGPGVVR 13 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GQGT(0.762)PPS(0.238)GPGVVR 111.81 0.011986 22822000 3293.5 2779.6 3439.7 2807.2 3726.2 3011.2 3537.6 2743.2 2894.8 2301.5 TRUE FALSE 3013.37053 2598.647535 3206.222748 3023.41103 3577.777564 3181.691542 3301.613159 2719.216492 3195.724819 2586.627195 1.164980611 1.004647109 1.239538018 1.168862307 1.383182536 1.23005416 1.276416317 1.051259531 1.235479479 1 11.33685642 -9.575409541 0.850024574 0.995953497 1.198184609 0.240519662 0.102957379 11.05492363 7.494291884 0.264226639 0.035230856 2.66E-10 9.575409541 0.202231112 GQGT(ph)PPSGPGVVR ddPTM_A459_MK2206_30min_R2 1 GQGTPPSGPGVVR 13 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GQGT(0.689)PPS(0.311)GPGVVR 120.32 0.0071527 33027000 45348 44231 41999 52819 43229 48093 52996 42396 43344 47183 TRUE FALSE 48819.87775 42034.55286 43399.2257 48503.51874 41531.61225 49923.21282 46037.56154 47937.30277 47113.98277 45643.42257 1.069592835 0.920933411 0.950831976 1.062661738 0.909914505 1.093765761 1.008635176 1.050256533 1.032218447 1 15.47811936 -6.772042401 24.99999873 1.038344948 0.982012799 0.198025331 0.054478916 340.8882809 803749.1227 0.018219417 0.016232712 1.69E-07 6.772042401 -0.056332149 GQGTPPS(ph)GPGVVR ddPTM_A459_MK2206_30min_R1 3 GQGTPPSGPGVVR 13 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GQGT(0.171)PPS(0.829)GPGVVR;GQGT(0.144)PPS(0.856)GPGVVR;GQGT(0.338)PPS(0.662)GPGVVR 132.23 0.0014445 36743200 11308 10065.3 10494.4 9711.7 11312.6 10265 11271.6 9489.9 9371.9 7953.7 TRUE FALSE 10346.19522 9410.047141 9782.069367 10459.69682 10861.99519 10846.19543 10519.69213 9406.930805 10346.14254 8939.064403 1.157413657 1.052688147 1.094305727 1.170110914 1.215115441 1.213347946 1.176822501 1.052339527 1.157407764 1 13.12590813 -9.202940124 0.891496507 0.999441268 1.146999582 0.369445934 0.055962178 3.406564222 3.47440638 0.068612265 0.020033936 6.27E-10 9.202940124 0.147558314 GQGTPPS(ph)GPGVVR ddPTM_A459_MK2206_30min_R2 1 GQGTPPSGPGVVR 13 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GQGT(0.233)PPS(0.767)GPGVVR 86.498 0.026389 34255000 25269 36193 28726 36555 33653 38404 38237 27197 27662 32178 TRUE FALSE 27203.61407 34395.70825 29683.7105 33568.33957 32331.61413 39865.49113 33216.43597 30751.74128 30067.99076 31128.0345 0.873926495 1.104975268 0.95360054 1.078395733 1.038665455 1.280694132 1.067090695 0.987911437 0.96594569 1 14.92592686 -1.640102297 20.65240349 1.043470822 0.037840831 0 0.104722054 0 0 0.024313198 0 0.022903281 1.640102297 -1.005629991 GQHPNPLR ddPTM_A459_MK2206_30min_R2 2 GQHPNPLR 8 0 M0QZT2;M0R389;Q15102;M0R1K3 M0QZT2 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma 0 ; 101.28 0.024106 4327000 39422 43749 39920 45027 41801 47542 49612 36270 37635 42360 FALSE TRUE 42440.17863 41576.48828 41250.91288 41348.15007 40159.68271 49351.24412 43097.88481 41010.61353 40908.42427 40977.79667 1.035687179 1.014610146 1.00666498 1.009037904 0.980035189 1.204341086 1.051737485 1.000800845 0.998307074 1 15.32255479 -3.820302743 17.19617666 1.032525016 1.052862936 0 0.061181335 0 0 0.014614874 0 0.000151251 3.820302743 0.020337919 GQKS(ph)PGALETPSAAGSQGNTASQGK ddPTM_A459_MK2206_30min_R1 1 GQKSPGALETPSAAGSQGNTASQGK 25 1 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 GQKS(0.722)PGALET(0.278)PSAAGSQGNTASQGK 117.49 4.28E-08 4168700 1425.2 1475.4 1274.3 1846.5 1677.4 1322.3 1196.5 1771 863.93 382.12 TRUE FALSE 1303.979256 1379.351192 1187.804066 1988.71775 1610.585606 1397.167483 1116.683668 1755.516334 953.7386151 429.4599105 3.036323587 3.211827596 2.765808956 4.630741314 3.750258329 3.253312939 2.600204678 4.087730405 2.220786136 1 8.746379654 -8.524017696 4.514253577 1.002463949 3.401992621 0.639482649 0.579238585 0.103227338 7.196981571 0.570827029 0.14893398 2.99E-09 8.524017696 2.399528672 GQKS(ph)PGALETPSAAGSQGNTASQGK ddPTM_A459_MK2206_30min_R2 2 GQKSPGALETPSAAGSQGNTASQGK 25 1 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 GQKS(0.977)PGALET(0.02)PS(0.002)AAGSQGNTASQGK;GQKS(0.877)PGALET(0.123)PSAAGSQGNTASQGK 143.61 4.16E-09 32607000 21753.4 56559 45475 45258 72513 49170 56244 38962 60664 33573 TRUE FALSE 23418.85703 53750.3623 46991.1138 41560.27663 69665.77527 51041.19881 48859.09524 44054.46718 65940.44506 32477.51576 0.721079075 1.65500227 1.44688141 1.279663042 2.145046308 1.571585684 1.504397553 1.356460497 2.030341408 1 14.98715366 -4.757992239 24.98428537 1.571005314 0.721077875 0.377973135 0.32005763 99.65786934 722189.581 0.075790557 0.537771587 1.75E-05 4.757992239 -0.849927439 GQLCELSCSTDYR ddPTM_A459_MK2206_30min_R2 2 GQLCELSCSTDYR 13 0 E9PKG1;Q99873-2;Q99873-3;Q99873;Q99873-5 E9PKG1 PRMT1 Protein arginine N-methyltransferase 1 0 ; 162.31 0.0050332 11010100 40907 44075 42007 46700 44181 46085 42932 40461 41180 45776 FALSE TRUE 44038.87137 41886.29959 43407.49241 42884.46061 42446.23195 47838.79697 37294.97683 45749.39162 44761.76196 44282.33287 0.994502063 0.945891891 0.98024403 0.968432732 0.958536491 1.080313386 0.842208945 1.033129663 1.010826645 1 15.43444361 GQPEGPLPSS(ph)SPR ddPTM_A459_MK2206_30min_R2 1 GQPEGPLPSSSPR 13 0 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4 P49815 TSC2 Tuberin 1 GQPEGPLPS(0.01)S(0.758)S(0.232)PR 127.07 0.001964 14708000 24129 34390 36392 38677 41657 45698 52490 39232 52860 49181 TRUE FALSE 25976.33479 32682.24261 37605.29112 35516.96538 40021.33687 47437.06941 45597.99995 44359.7571 57457.66725 47576.228 0.545993995 0.686944804 0.79042187 0.74652756 0.841204495 0.99707504 0.958419822 0.932393318 1.207696988 1 15.53795327 -5.683531077 0.420019588 1.076179801 0.436647605 0.821154275 0.075614308 1.071530412 0.256070518 0.066025312 0.320589746 2.07E-06 5.683531077 -0.639532196 GQPEGPLPSSS(ph)PR ddPTM_A459_MK2206_30min_R1 3 GQPEGPLPSSSPR 13 0 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4 P49815 TSC2 Tuberin 1 GQPEGPLPS(0.085)S(0.085)S(0.829)PR;GQPEGPLPS(0.007)S(0.212)S(0.78)PR;GQPEGPLPS(0.001)S(0.036)S(0.964)PR 161.87 0.00036352 32854200 10339.4 11192.6 11770.5 10896.8 14021.7 13988.9 16108 14474.3 14842.4 15432.6 TRUE FALSE 9459.979736 10463.95971 10971.55125 11736.07342 13463.186 14780.93943 15033.46471 14347.75272 16385.32059 17344.507 0.545416467 0.603301074 0.632566337 0.67664497 0.77622189 0.85219715 0.866756531 0.827221709 0.944697972 1 14.08219121 -5.755703718 0.304435825 1.001299835 0.350085341 0.961875061 0.028202 0.799402126 0.095921116 0.037241685 0.185605179 1.76E-06 5.755703718 -0.651214494 GQPEGPLPSSS(ph)PR ddPTM_A459_MK2206_30min_R2 3 GQPEGPLPSSSPR 13 0 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4 P49815 TSC2 Tuberin 1 GQPEGPLPS(0.003)S(0.035)S(0.962)PR;GQPEGPLPS(0.001)S(0.188)S(0.811)PR;GQPEGPLPS(0.004)S(0.101)S(0.895)PR 173.71 0.00014237 54764000 101665 141308 131085 160228 167031 184056 206715 186938 185111 213358 TRUE FALSE 109448.5506 134290.8502 135455.3085 147136.8599 160472.5237 191060.3801 179573.0722 211371.4385 201211.6202 206396.1459 0.530283887 0.650646114 0.656287974 0.712885695 0.777497675 0.925697421 0.870040821 1.02410555 0.974880705 1 17.65505651 -6.340716641 0.56979857 1.016274506 0.534966851 0.942548094 0.03893176 0.212556318 0.144193465 0.028539921 0.053097158 4.56E-07 6.340716641 -0.481307656 GQS(ph)SPPPAPPICLR ddPTM_A459_MK2206_30min_R2 5 GQSSPPPAPPICLR 14 0 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 GQS(0.5)S(0.5)PPPAPPICLR;GQS(0.5)S(0.5)PPPAPPICLR;GQS(0.5)S(0.5)PPPAPPICLR;GQS(0.922)S(0.078)PPPAPPICLR;GQS(0.58)S(0.42)PPPAPPICLR 188.96 9.51E-05 183565900 296000 294047 279423 299684 288245 310366 318868 259450 253722 325907 TRUE FALSE 318661.9876 279445.0536 288738.8234 275198.8586 276927.053 322177.1956 277000.2486 293361.0058 275790.2809 315272.6813 1.010750396 0.886359872 0.915838385 0.872891547 0.878373134 1.021900135 0.8786053 0.930499289 0.874767455 1 18.26624064 GQSKYHYYGIAVKES(ph)S(ph)QY(ph)YDVMYS(ph)K ddPTM_A459_MK2206_30min_R1 1 GQSKYHYYGIAVKESSQYYDVMYSK 25 2 B4DZB7;F8VRD4;Q33E94-4;Q33E94;Q33E94-2 B4DZB7 RFX4 Transcription factor RFX4 4 GQS(0.007)KY(0.007)HY(0.005)Y(0.007)GIAVKES(0.868)S(0.868)QY(0.702)Y(0.453)DVMY(0.523)S(0.56)K 45.423 0.025313 7471800 964.33 1141.7 1172.5 1142.4 1188.7 824.21 1256 985 1045.3 1189.2 TRUE FALSE 882.3086696 1067.375122 1092.913967 1230.387846 1141.351562 870.8760579 1172.214532 976.3882488 1153.962676 1336.527074 0.660150241 0.798618407 0.81772677 0.9205858 0.853968157 0.651596271 0.877060072 0.730541317 0.863403891 1 10.38427335 -8.560449668 8.005225209 0.999998928 0.795080067 0.375213785 0.083321895 0.793619797 168.1944044 0.080495012 0.020806546 2.75E-09 8.560449668 -0.204918861 GQSPAGDGS(ph)PEPPTPR ddPTM_A459_MK2206_30min_R1 2 GQSPAGDGSPEPPTPR 16 0 A0A0A0MRW6;Q9H6R4-2;Q9H6R4-4;Q9H6R4;Q9H6R4-3 A0A0A0MRW6 NOL6 Nucleolar protein 6 1 GQS(0.003)PAGDGS(0.645)PEPPT(0.352)PR;GQS(0.343)PAGDGS(0.654)PEPPT(0.003)PR 121.51 0.001519 6434100 3325.6 3117.5 3271.7 2822 3330.7 3049.3 3512.1 3236.3 2914.7 2557 TRUE FALSE 3042.740257 2914.550183 3049.626119 3039.350929 3198.031166 3221.948731 3277.814217 3208.00537 3217.693495 2873.780464 1.058793563 1.01418679 1.061189662 1.057614166 1.112830714 1.121153397 1.140593117 1.116301475 1.119672687 1 11.48873414 -6.122944431 2.475194859 1.110896815 1.04176635 0.303887831 0.038569494 0.29292798 3.510392333 0.01158623 0.016169702 7.53E-07 6.122944431 -0.069130465 GQSPAGDGS(ph)PEPPTPR ddPTM_A459_MK2206_30min_R2 2 GQSPAGDGSPEPPTPR 16 0 A0A0A0MRW6;Q9H6R4-2;Q9H6R4-4;Q9H6R4;Q9H6R4-3 A0A0A0MRW6 NOL6 Nucleolar protein 6 1 GQS(0.004)PAGDGS(0.955)PEPPT(0.042)PR;GQS(0.039)PAGDGS(0.921)PEPPT(0.04)PR 137.52 0.00040705 7257300 23475 24095.2 24329.2 23797.2 25461.7 27308 28629 21680.3 25203.6 24475.9 TRUE FALSE 25272.26405 22898.66741 25140.32339 21852.89264 24461.94572 28347.22508 24869.97791 24513.98965 27395.76357 23677.25339 1.067364683 0.96711671 1.061792218 0.922948801 1.033141189 1.197234519 1.050374277 1.035339245 1.157049896 1 14.53121411 -6.533995168 24.97443491 1.090893508 1.002666623 0.261955378 0.066313795 274.816147 617404.2129 0.020919607 0.020935804 2.92E-07 6.533995168 -0.088226886 GQSQLS(ph)NPTDDSWK ddPTM_A459_MK2206_30min_R1 2 GQSQLSNPTDDSWK 14 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 GQSQLS(0.633)NPT(0.363)DDS(0.004)WK;GQSQLS(0.937)NPT(0.037)DDS(0.026)WK 153.23 0.0003673 31186000 9793.7 8994.5 9780.8 8015.2 8934.1 7051.2 9777.1 9068.2 9322.6 8844.8 TRUE FALSE 8960.694386 8408.956415 9116.906547 8632.532093 8578.235879 7450.43285 9124.887498 8988.917683 10291.71763 9940.560599 0.90142747 0.845923762 0.917142092 0.868415016 0.862952928 0.749498258 0.91794496 0.904266675 1.035325677 1 13.2791115 -8.061822703 2.176771877 1.018563925 0.861968769 0.618181156 0.04660792 0.215961243 1.849394276 0.040354087 0.013040555 8.67E-09 8.061822703 -0.156595156 GQSQLS(ph)NPTDDSWK ddPTM_A459_MK2206_30min_R2 1 GQSQLSNPTDDSWK 14 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 GQS(0.003)QLS(0.995)NPT(0.001)DDS(0.001)WK 178.85 7.20E-05 5782900 24297 36111 27244 33852 29418 29776 25525 27286 24434 31832 TRUE FALSE 26157.197 34317.78025 28152.30136 31086.18331 28262.90151 30909.14655 22173.53684 30852.37389 26559.22515 30793.32445 0.84944375 1.11445519 0.914233908 1.009510466 0.917825601 1.003761273 0.720076096 1.001917605 0.862499442 1 14.91033001 GQSQLSNPT(ph)DDSWK ddPTM_A459_MK2206_30min_R1 2 GQSQLSNPTDDSWK 14 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 GQSQLS(0.103)NPT(0.764)DDS(0.133)WK;GQSQLS(0.221)NPT(0.76)DDS(0.019)WK 260.08 2.07E-35 20643300 7100.2 6603.9 6915.6 6050.2 6289.6 5697.2 6088.9 6418.2 6769.3 6063.9 TRUE FALSE 6496.290705 6173.98491 6446.18834 6516.187452 6039.071914 6019.770541 5682.720591 6362.086354 7472.992959 6815.141712 0.953214325 0.905921721 0.9458627 0.956133816 0.886125655 0.883293524 0.83383748 0.93352224 1.09652789 1 12.73452794 -8.145654144 5.654367406 1.04631876 0.908805327 0.63528819 0.041472221 0.141490387 5.888591243 0.030337253 0.011074512 7.15E-09 8.145654144 -0.137513433 GQSQLSNPT(ph)DDSWK ddPTM_A459_MK2206_30min_R2 4 GQSQLSNPTDDSWK 14 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 GQSQLS(0.095)NPT(0.834)DDS(0.071)WK;GQSQLS(0.137)NPT(0.861)DDS(0.002)WK;GQSQLS(0.016)NPT(0.983)DDSWK;GQSQLS(0.108)NPT(0.888)DDS(0.004)WK 223.14 9.36E-09 64953700 197023 223051.2 200940 213102 221438 193314.6 264611 179051.1 197420.7 217529.7 TRUE FALSE 212107.2324 211974.8018 207639.2393 195690.8849 212743.2315 200671.3226 229867.2578 202453.6935 214591.9956 210431.7237 1.007962244 1.007332916 0.986729737 0.929949541 1.010984597 0.953617254 1.092360286 0.962087322 1.019770175 1 17.68299269 GQSQTS(ph)PDHR ddPTM_A459_MK2206_30min_R2 2 GQSQTSPDHR 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GQS(0.006)QT(0.065)S(0.929)PDHR;GQSQT(0.092)S(0.908)PDHR 114.76 0.0068572 2926800 16729.3 8210.8 7354.5 9037.3 12617 12498.9 11479 166303 34499 15078.6 TRUE FALSE 18010.10807 7803.063612 7599.695359 8298.923681 12121.59318 12974.5544 9971.793511 188039.3731 37499.66066 14586.58652 1.234703407 0.534947885 0.521005744 0.568942135 0.831009583 0.889485308 0.683627626 12.89125272 2.570831813 1 13.83235469 GQSTDS(ph)LPQTICR ddPTM_A459_MK2206_30min_R2 2 GQSTDSLPQTICR 13 0 Q96NE9-2;Q96NE9;Q96NE9-3 Q96NE9-2 FRMD6 FERM domain-containing protein 6 1 GQS(0.019)T(0.208)DS(0.773)LPQTICR;GQST(0.079)DS(0.92)LPQTICR 181.75 0.00011587 12057200 36417 52533 49406 50810 44765 53598 48287 32071 40402 33898 TRUE FALSE 39205.11352 49924.28761 51053.17138 46658.66047 43007.30117 55637.70945 41946.8589 36262.78982 43916.09293 32791.91104 1.195572697 1.5224574 1.556883078 1.422871037 1.311521647 1.696690058 1.279183115 1.105845578 1.339235547 1 15.00105236 -7.513614254 23.0667776 1.172027045 1.454483105 0.453407481 0.149724528 148.9873552 370957.2278 0.064398745 0.039847564 3.06E-08 7.513614254 0.28245606 GQTPLTEGSEDLDGHS(ph)DPEESFAR ddPTM_A459_MK2206_30min_R1 2 GQTPLTEGSEDLDGHSDPEESFAR 24 0 K7EQI9;Q86VR2-2;Q86VR2 K7EQI9 FAM134C Protein FAM134C 1 GQTPLTEGSEDLDGHS(0.997)DPEES(0.003)FAR;GQTPLTEGSEDLDGHS(1)DPEESFAR 204.91 1.62E-31 33998000 4036.7 3293.5 2993.8 3167.9 4663.3 3636.2 3841.4 3182.4 3623.7 2818.6 TRUE FALSE 3693.357467 3079.092551 2790.589197 3411.892207 4477.550886 3842.078502 3585.147215 3154.576612 4000.396583 3167.789447 1.165910023 0.972000382 0.880926351 1.07705776 1.413462277 1.212857914 1.131750476 0.995829005 1.262835377 1 11.62926073 -6.004165654 24.9876552 1.176416481 0.998874542 0.237951683 0.131625007 245.6577162 1473597.303 0.038357408 0.055393523 9.90E-07 6.004165654 -0.177541939 GQTPLTEGSEDLDGHS(ph)DPEESFAR ddPTM_A459_MK2206_30min_R2 2 GQTPLTEGSEDLDGHSDPEESFAR 24 0 K7EQI9;Q86VR2-2;Q86VR2 K7EQI9 FAM134C Protein FAM134C 1 GQTPLTEGSEDLDGHS(0.994)DPEES(0.006)FAR;GQTPLTEGSEDLDGHS(0.998)DPEES(0.002)FAR 154.32 1.22E-10 36318000 45435 33115.8 30395.6 38198.9 34203.7 47826 47089 23629.6 32073.6 30111.1 TRUE FALSE 48913.53853 31471.31753 31408.97413 35077.92768 32860.69088 49646.05194 40906.15774 26718.06985 34863.30375 29128.57727 1.679228548 1.080427555 1.078287272 1.204244456 1.128125503 1.704376135 1.404330783 0.917245961 1.196876299 1 14.83014762 -7.757484935 24.99989195 1.042795838 1.308943148 0.258220197 0.222033971 156.8818128 991822.2959 0.113891595 0.062603293 1.75E-08 7.757484935 0.26614731 GQVS(ph)ESEDSITK ddPTM_A459_MK2206_30min_R1 2 GQVSESEDSITK 12 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 GQVS(0.996)ES(0.002)EDS(0.002)ITK;GQVS(0.974)ES(0.021)EDS(0.005)ITK 152.99 0.00048093 11689100 2820.8 3068.8 2627.89 2294.94 2740 2137.99 2900.57 2642.79 2297 2166.35 TRUE FALSE 2580.876147 2869.020562 2449.516149 2471.696676 2630.859998 2259.041146 2707.078268 2619.684366 2535.78137 2434.733793 1.060023956 1.178371356 1.006071446 1.015181489 1.080553449 0.927839073 1.111858009 1.075963365 1.041502515 1 11.24954833 -5.274419678 24.98546571 1.03529655 1.119197661 0.281207922 0.055368659 861.7232983 1658712.579 0.014164212 0.02980816 5.32E-06 5.274419678 0.083901111 GQVS(ph)ESEDSITK ddPTM_A459_MK2206_30min_R2 1 GQVSESEDSITK 12 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 GQVS(0.5)ES(0.5)EDSITK 205.26 1.93E-05 8653800 28209 31260 30390 29429 28597 26709 34944 26799 27277 36349 TRUE FALSE 30368.70273 29707.67386 31403.18743 27024.55656 27474.13809 27725.42971 30355.81082 30301.72131 29649.50415 35162.93511 0.86365665 0.844857625 0.893076398 0.768552354 0.78133802 0.788484512 0.863290016 0.861751763 0.843203335 1 15.10176788 -9.358742159 0.773487694 1.003349832 0.82748233 0.627796227 0.038611708 2.609268003 1.860070367 0.066222864 0.014627212 4.38E-10 9.358742159 -0.175867502 GQVSES(ph)EDSITK ddPTM_A459_MK2206_30min_R1 2 GQVSESEDSITK 12 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 GQVS(0.019)ES(0.532)EDS(0.449)ITK;GQVS(0.008)ES(0.819)EDS(0.171)IT(0.001)K 154.23 0.00044769 11129000 3261.2 3109.3 3330.5 3058 3276.6 2907.1 3156.1 2728.7 3060.1 3061.2 TRUE FALSE 2983.817815 2906.884005 3104.434939 3293.52769 3146.086084 3071.69749 2945.562328 2704.843264 3378.208346 3440.444567 0.867276818 0.844915228 0.902335404 0.957297124 0.914441731 0.892819934 0.856157473 0.786190043 0.981910413 1 11.74837928 -5.271412433 22.28310768 0.902870104 0.856096025 0.109879959 0.059097724 357.1835933 798076.1334 0.015602747 0.033256048 5.35E-06 5.271412433 -0.046774079 GQVSES(ph)EDSITK ddPTM_A459_MK2206_30min_R2 3 GQVSESEDSITK 12 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 GQVS(0.089)ES(0.91)EDSITK;GQVS(0.024)ES(0.974)EDS(0.002)ITK;GQVS(0.087)ES(0.854)EDS(0.059)ITK 196.37 0.00015879 21339000 81511 94018 94176 101126 98989 88969 121562 84555 83739 103503 TRUE FALSE 87751.54483 89349.20283 97315.78084 92863.68231 95102.19448 92354.77764 105600.7634 95606.62882 91022.46685 100125.7056 0.876413747 0.892370269 0.97193603 0.92747094 0.949827958 0.922388283 1.05468184 0.954865968 0.909081902 1 16.61145288 -2.458994169 0.4590603 0.970465129 4.78E-11 0.359267188 0.040401929 42.93283323 1.194924269 0.025368917 35.14141341 0.003475408 2.458994169 -0.970465129 GQVSESEDS(ph)ITK ddPTM_A459_MK2206_30min_R1 1 GQVSESEDSITK 12 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 GQVSES(0.081)EDS(0.916)IT(0.003)K 160.65 0.00047473 11648000 2285.6 2978.9 2563.2 2313.1 1896.5 1697.1 2045 2091.5 2534.1 2373.7 TRUE FALSE 2091.197718 2784.973069 2389.217125 2491.255363 1820.958389 1793.188335 1908.581781 2073.214236 2797.528763 2667.771877 0.783874265 1.043932239 0.895585243 0.93383373 0.6825765 0.672167044 0.715421659 0.777133253 1.048638674 1 11.38141959 -6.226352202 24.63454767 0.792626646 0.922228174 0.100454412 0.132727654 927.0834053 650900.4131 0.039480698 0.050967173 5.94E-07 6.226352202 0.129601528 GQVSESEDS(ph)ITK ddPTM_A459_MK2206_30min_R2 4 GQVSESEDSITK 12 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 GQVS(0.005)ES(0.023)EDS(0.971)ITK;GQVSES(0.018)EDS(0.679)IT(0.303)K;GQVSES(0.005)EDS(0.974)IT(0.021)K;GQVSES(0.02)EDS(0.757)IT(0.224)K 164.15 0.00043309 70817000 203670 198225 195162 191816 195549 165418 216734 163411 157963 232676 TRUE FALSE 219263.1318 188381.4347 201668.6037 176144.0192 187870.7637 171713.0979 188276.5655 184769.3788 171702.3362 225083.8012 0.97413999 0.836939103 0.895971201 0.782570839 0.834670299 0.762885188 0.836473191 0.820891498 0.762837376 1 17.78010271 -1.522881565 1.023430164 0.822761148 173.9505965 0.254670141 0.067531387 2631.554082 3.066415058 0.018884455 1069224.993 0.029999805 1.522881565 173.1278354 GQVSESEDSIT(ph)K ddPTM_A459_MK2206_30min_R1 1 GQVSESEDSITK 12 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 GQVSES(0.321)EDS(0.104)IT(0.576)K 158.52 0.0010636 15254000 2644.2 2533.4 2598.6 1896.1 2012.4 2126.7 2416.3 1975.6 2533.1 2637.3 TRUE FALSE 2419.296905 2368.4752 2422.214272 2042.137951 1932.241847 2247.111916 2255.113036 1958.327537 2796.42481 2964.028635 0.816219141 0.799072982 0.817203398 0.688973759 0.651897159 0.7581276 0.760827007 0.660697915 0.943454047 1 11.53334367 -8.394830064 5.012865361 0.996295068 0.745001854 0.717622017 0.057484125 0.121068183 4.101148059 0.059556673 0.015525669 4.03E-09 8.394830064 -0.251293215 GRAEGEWEDQEALDY(ph)FSDKESGK ddPTM_A459_MK2206_30min_R2 1 GRAEGEWEDQEALDYFSDKESGK 23 2 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 GRAEGEWEDQEALDY(0.511)FS(0.461)DKES(0.028)GK 54.668 0.030201 25222000 30628 32709 30891 40991 34991 22486 40394 30093 29363 35958 TRUE FALSE 32972.90323 31084.71862 31920.89052 37641.90418 33617.07752 23341.72049 35090.21928 34026.25842 31916.94066 34784.6934 0.947914154 0.8936321 0.917670602 1.082139887 0.966433055 0.671034245 1.008783342 0.978196301 0.91755705 1 15.08616498 -8.985321252 0.901688325 0.999143611 0.928318527 0.038343425 0.101068999 6.744095755 8.744192083 0.104829198 0.034046698 1.03E-09 8.985321252 -0.070825084 GRAEGEWEDQEALDYFS(ph)DKESGK ddPTM_A459_MK2206_30min_R1 4 GRAEGEWEDQEALDYFSDKESGK 23 2 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 GRAEGEWEDQEALDY(0.369)FS(0.539)DKES(0.092)GK;GRAEGEWEDQEALDY(0.43)FS(0.505)DKES(0.065)GK;GRAEGEWEDQEALDY(0.126)FS(0.853)DKES(0.021)GK;GRAEGEWEDQEALDY(0.446)FS(0.517)DKES(0.038)GK 103.2 3.44E-05 167009000 20906.03 25885.9 26766.4 23378.5 17371.7 15710.02 17992.97 20923.77 19409.85 16542.02 TRUE FALSE 19127.86237 24200.72321 24949.57134 25179.11612 16679.7484 16599.50776 16792.6918 20740.83568 21427.57337 18591.37032 1.028857047 1.301718097 1.341997438 1.354344284 0.897176922 0.892860906 0.903251966 1.115616295 1.152554814 1 14.18234549 -6.260896256 24.9999951 0.989805591 1.266033299 0.54394008 0.117891828 40.08996715 1845337.914 0.038556886 0.046811107 5.48E-07 6.260896256 0.276227708 GRAEGEWEDQEALDYFS(ph)DKESGK ddPTM_A459_MK2206_30min_R2 2 GRAEGEWEDQEALDYFSDKESGK 23 2 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 GRAEGEWEDQEALDY(0.021)FS(0.958)DKES(0.021)GK;GRAEGEWEDQEALDY(0.043)FS(0.816)DKES(0.141)GK 83.467 0.00040172 16195300 33668 42936 40500 40906 40248 25160 50361 37834 35318 43584 TRUE FALSE 36245.64797 40803.86067 41850.24979 37563.84895 38667.66129 26117.48143 43748.54021 42779.0337 38389.8958 42161.85765 0.859678629 0.967790865 0.992609247 0.890943878 0.917124231 0.619457559 1.037633127 1.014638256 0.910536156 1 15.36365081 GRAS(ph)PGGVSTSSSDGK ddPTM_A459_MK2206_30min_R1 1 GRASPGGVSTSSSDGK 16 1 P54259 P54259 ATN1 Atrophin-1 1 GRAS(0.999)PGGVST(0.001)SSSDGK 118.84 0.00095167 39884000 5612.7 4435 4870.9 4236.2 4917.8 4834.5 4949.4 3981.3 4266.5 4220.1 TRUE FALSE 5135.310392 4146.280694 4540.276879 4562.472858 4721.913612 5108.225212 4619.234557 3946.491914 4710.017943 4742.917848 1.082732309 0.87420462 0.957275041 0.961954857 0.995571453 1.077021651 0.973922531 0.832081019 0.993063362 1 12.21155916 -7.544742274 24.9993226 0.928143668 0.986926275 0.078482541 0.070841783 522.6957244 597656.4914 0.032984875 0.019045388 2.85E-08 7.544742274 0.058782607 GRAS(ph)PGGVSTSSSDGK ddPTM_A459_MK2206_30min_R2 3 GRASPGGVSTSSSDGK 16 1 P54259 P54259 ATN1 Atrophin-1 1 GRAS(1)PGGVSTSSSDGK;GRAS(1)PGGVSTSSSDGK;GRAS(1)PGGVSTSSSDGK 167.95 6.58E-05 63969400 64713 74174 62038 79655 77422 70051 69201 59943 55573 72698 TRUE FALSE 69667.47704 70490.62702 64106.31596 73146.9317 74382.02327 72716.83989 60114.82557 67777.75592 60406.63909 70325.87021 0.990637966 1.002342762 0.911560934 1.040114135 1.057676543 1.033998437 0.854803864 0.963767042 0.858953311 1 16.10176788 -7.24791149 24.9972839 0.916361638 1.005485761 0.373983842 0.054877966 828.9673963 1531795.524 0.021070618 0.016233649 5.65E-08 7.24791149 0.089124123 GRAS(ph)PGGVSTSSSDGKAEK ddPTM_A459_MK2206_30min_R1 1 GRASPGGVSTSSSDGKAEK 19 2 P54259 P54259 ATN1 Atrophin-1 1 GRAS(1)PGGVSTSSSDGKAEK 96.544 0.00063627 3111000 2042.8 2500.6 2194 2712.7 2570.7 2098.2 1580.8 2473.4 1203.6 845.04 TRUE FALSE 1869.049133 2337.810485 2045.077393 2921.632624 2468.303575 2216.998271 1475.347716 2451.775325 1328.718527 949.7299349 1.967979595 2.46155291 2.15332519 3.076277283 2.598953118 2.334345996 1.553439206 2.581550012 1.399048801 1 9.891373517 -8.452176118 0.764691458 0.98137305 2.438263686 0.555491066 0.402153269 0.521857183 0.69237694 0.393460375 0.150434314 3.53E-09 8.452176118 1.456890635 GRAS(ph)PGGVSTSSSDGKAEK ddPTM_A459_MK2206_30min_R2 2 GRASPGGVSTSSSDGKAEK 19 2 P54259 P54259 ATN1 Atrophin-1 1 GRAS(0.998)PGGVSTSSS(0.001)DGKAEK;GRAS(0.998)PGGVS(0.001)TSSSDGKAEK 52.731 0.027572 8084300 15550.1 40954 29451 35874 45355 32775 41431 27440 37075 21717 TRUE FALSE 16740.62761 38920.28391 30432.88164 32942.97944 43574.13481 34022.27559 35991.05993 31026.50222 40299.71648 21008.37607 0.79685491 1.852607921 1.448607048 1.568087859 2.074131512 1.619462422 1.713176678 1.476863424 1.918268997 1 14.35867703 -4.753216413 24.99880753 1.653560835 0.796853332 0.436930715 0.282659203 268.9828461 817676.6952 0.065137108 0.717219647 1.77E-05 4.753216413 -0.856707503 GRASS(ph)HSSQTQGGGSVTK ddPTM_A459_MK2206_30min_R1 2 GRASSHSSQTQGGGSVTK 18 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 GRAS(0.15)S(0.795)HS(0.053)S(0.003)QTQGGGSVTK;GRAS(0.106)S(0.854)HS(0.028)S(0.012)QTQGGGSVTK 92.307 0.0027722 3252600 1172.32 697.5 435.33 609.79 1180.39 1266.38 1152.09 645.17 315.59 442.15 TRUE FALSE 1072.608028 652.0926232 405.7810125 656.7561315 1133.372567 1338.081341 1075.236178 639.5293467 348.3967098 496.9268801 2.158482608 1.312250654 0.816580927 1.321635351 2.280763252 2.692712741 2.163771415 1.286968712 0.701102564 1 8.956889773 GRASS(ph)HSSQTQGGGSVTK ddPTM_A459_MK2206_30min_R2 3 GRASSHSSQTQGGGSVTK 18 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 GRAS(0.283)S(0.606)HS(0.11)S(0.001)QTQGGGSVTK;GRAS(0.124)S(0.872)HS(0.004)SQTQGGGSVTK;GRAS(0.386)S(0.613)HS(0.002)SQTQGGGSVTK 91.518 0.002936 8326900 1839.27 8108.4 3733.64 12490.6 11406.3 17544.4 8934.6 5416.65 9626 2625.7 TRUE FALSE 1980.085925 7705.748647 3858.117694 11470.07802 10958.43135 18212.06444 7761.476288 6124.624753 10463.25208 2540.023624 0.779554137 3.033731094 1.518929847 4.51573675 4.314302925 7.170037422 3.055670906 2.411247161 4.119352269 1 11.3106262 -5.759040854 24.99963554 3.987929274 1.903037304 0.245000273 1.596845758 88.48379452 922235.0663 0.446043858 0.728220347 1.74E-06 5.759040854 -2.08489197 GRDHLS(ph)GVPTDVT(ph)VT(ph)ETPEK ddPTM_A459_MK2206_30min_R1 1 GRDHLSGVPTDVTVTETPEK 20 1 I3L072;Q9BSJ5-2;Q9BSJ5-3;Q9BSJ5 I3L072 C17orf80 Uncharacterized protein C17orf80 3 GRDHLS(1)GVPT(0.333)DVT(0.667)VT(0.774)ET(0.227)PEK 64.298 0.032922 1393700 65.162 0 270.79 155.26 211.07 155.06 241.54 146.2 126.79 0 TRUE FALSE 59.61962972 0 252.4095293 167.2181521 202.662635 163.8393632 225.4273073 144.9217888 139.9702742 0 0 GRDS(ph)PYQSR ddPTM_A459_MK2206_30min_R2 4 GRDSPYQSR 9 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 GRDS(1)PYQSR;GRDS(1)PYQSR;GRDS(0.999)PYQS(0.001)R;GRDS(0.999)PY(0.001)QSR 82.505 0.022641 21859100 2002.28 2472.74 2809.98 3447.17 3693.82 2961.96 3534.08 2763.73 2437.98 3084.72 TRUE FALSE 2155.576096 2349.947327 2903.663331 3165.525184 3548.782067 3074.679463 3070.051051 3124.959 2650.031094 2984.065839 0.72236211 0.787498485 0.973056054 1.060809431 1.18924389 1.030365826 1.028814784 1.047215165 0.888060531 1 11.54306365 -5.273098676 2.453431975 1.042381634 0.728817326 0.71814148 0.069538054 0.161409323 1.847567018 0.020081994 0.066232095 5.33E-06 5.273098676 -0.313564308 GRDWNVDLIPK ddPTM_A459_MK2206_30min_R2 1 GRDWNVDLIPK 11 1 P50395-2;P50395;Q5SX87;V9GYJ7;V9GYF8;Q5SX90;Q5SX86;G5E9U5;P31150 P50395-2 GDI2;GDI1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha 0 103.08 0.015842 0 37005 48725 49624 48097 48210 43210 50248 36887 43736 41805 FALSE TRUE 39838.13125 46305.38735 51278.43939 44167.32125 46317.03316 44854.38683 43650.37724 41708.25755 47540.07822 40440.90627 0.985094918 1.145013592 1.267984428 1.092144695 1.145301563 1.109134067 1.079361994 1.03133835 1.175544334 1 15.30352771 -7.096168953 2.86537151 1.073933007 1.133903478 0.099579954 0.077321024 0.660809235 10.51158829 0.032595838 0.024727334 8.01E-08 7.096168953 0.059970471 GRECS(ph)PTSSLER ddPTM_A459_MK2206_30min_R1 2 GRECSPTSSLER 12 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GRECS(0.932)PT(0.062)S(0.006)SLER;GRECS(0.964)PT(0.024)S(0.003)S(0.009)LER 184.11 0.00049552 58576000 9982.6 10957 10170.5 9354.3 10345.5 8918.2 9766.1 9108.9 6622 6162.2 TRUE FALSE 9133.527449 10243.69731 9480.154797 10074.76981 9933.416828 9423.140777 9114.621288 9029.261848 7310.380597 6925.619858 1.318802885 1.479101874 1.368852896 1.454710194 1.434300038 1.360620561 1.316072998 1.303747828 1.055556145 1 12.75772749 -8.171394653 1.231121998 0.986548449 1.407823284 0.891070558 0.050271053 0.125065372 0.359802627 0.044786631 0.014691686 6.74E-09 8.171394653 0.421274835 GRECS(ph)PTSSLER ddPTM_A459_MK2206_30min_R2 1 GRECSPTSSLER 12 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GRECS(0.978)PT(0.022)SSLER 112.62 0.029902 28519000 19227 28275 25023 32232 29215 31486 23599 23884 29992 25061 TRUE FALSE 20699.0339 26870.90462 25857.25433 29598.54249 28067.87231 32684.22179 20500.42295 27005.72081 32600.64995 24243.26162 0.853805656 1.10838653 1.0665749 1.220897706 1.157759741 1.34817758 0.845613238 1.113947505 1.344730361 1 14.56529619 -4.203849875 1.463779857 1.143978587 8.02E-16 0.257587723 0.143089585 7.829759449 4.698235874 0.040115384 19.85068726 6.25E-05 4.203849875 -1.143978587 GREDVSNFDDEFTSEAPILT(ph)PPR ddPTM_A459_MK2206_30min_R2 1 GREDVSNFDDEFTSEAPILTPPR 23 1 Q16513-3;Q16513-2;Q16513;Q16513-4;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 GREDVSNFDDEFTSEAPILT(1)PPR 94.15 0.0082939 0 3183.2 3995.7 4672.8 7962.1 4893.6 7781.4 6656 5384.3 5151.2 6509.6 TRUE FALSE 3426.908239 3797.279348 4828.58882 7311.570961 4701.452676 8077.52663 5782.059205 6088.046497 5599.242065 6297.192285 0.54419622 0.603011497 0.766784402 1.161084278 0.746595064 1.282718752 0.918196387 0.966787454 0.889164855 1 12.62049301 -5.497654519 3.52445565 0.992224131 0.580986201 0.595973026 0.139860582 0.15104052 3.910334118 0.036571722 0.077411867 3.18E-06 5.497654519 -0.41123793 GREDVSNFDDEFTSEAPILT(ph)PPREPR ddPTM_A459_MK2206_30min_R1 4 GREDVSNFDDEFTSEAPILTPPREPR 26 2 Q16513-3;Q16513-2;Q16513;Q16513-4;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFT(0.001)S(0.002)EAPILT(0.997)PPREPR 131.41 7.40E-09 426208000 12562.1 13098.2 13636.3 11743.9 14101.6 13394.8 13482.5 11779.6 10696.8 11876.8 TRUE FALSE 11493.62743 12245.5048 12710.70595 12648.41721 13539.90341 14153.202 12583.10703 11676.6122 11808.77064 13348.18765 0.86106277 0.917390819 0.952242078 0.947575622 1.014362681 1.060308888 0.942682809 0.874771355 0.884672208 1 13.70435625 -4.830507456 1.626769961 0.960590074 0.831059478 0.254684039 0.052918881 1.496785114 4.175885022 0.016935229 0.300780514 1.48E-05 4.830507456 -0.129530596 GREDVSNFDDEFTSEAPILT(ph)PPREPR ddPTM_A459_MK2206_30min_R2 5 GREDVSNFDDEFTSEAPILTPPREPR 26 2 Q16513-3;Q16513-2;Q16513;Q16513-4;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFT(0.033)S(0.033)EAPILT(0.934)PPREPR;GREDVSNFDDEFT(0.004)S(0.001)EAPILT(0.995)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR 111.38 2.28E-08 288005000 79869.4 101341.8 91076.1 112197.3 107226.1 111640.2 102704.7 74195.3 97211.7 97176.9 TRUE FALSE 85984.26267 96309.31358 94112.53172 103030.4217 103015.8645 115888.746 89219.44952 83892.88046 105666.9979 94006.02571 0.914667565 1.024501492 1.00113297 1.095998059 1.095843205 1.232779975 0.949082241 0.892420245 1.124044944 1 16.52046561 -4.41335383 1.365076939 1.052561792 0.722767346 0.164960052 0.090969929 6.233430576 5.36531443 0.027978646 3.623296422 3.86E-05 4.41335383 -0.329794446 GREETVAEDVCIDLTCDSGSQAVPS(ph)PATR ddPTM_A459_MK2206_30min_R1 1 GREETVAEDVCIDLTCDSGSQAVPSPATR 29 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 GREETVAEDVCIDLTCDS(0.001)GS(0.015)QAVPS(0.955)PAT(0.03)R 110.38 4.42E-11 19254000 1719.7 1775.9 1723.1 1590.5 1627.4 1671.9 1863.4 1746.5 1936 1527.3 TRUE FALSE 1573.430484 1660.288587 1606.140773 1713.000586 1562.577212 1766.561533 1739.095986 1731.230535 2137.254128 1716.513455 0.916643257 0.967244727 0.935699495 0.997953486 0.910320398 1.029156823 1.013156047 1.008573822 1.245113531 1 10.74526545 -7.582703842 1.274540906 1.107234589 0.952939894 0.431977356 0.067965593 0.418940874 1.273082712 0.049348715 0.021796286 2.61E-08 7.582703842 -0.154294696 GREETVAEDVCIDLTCDSGSQAVPS(ph)PATR ddPTM_A459_MK2206_30min_R2 2 GREETVAEDVCIDLTCDSGSQAVPSPATR 29 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 GREETVAEDVCIDLTCDS(0.003)GS(0.023)QAVPS(0.927)PAT(0.047)R;GREETVAEDVCIDLTCDSGSQAVPS(0.83)PAT(0.17)R 137.84 3.32E-14 6243800 14236.7 14698.3 12092.2 18418.9 16218.5 16013.1 18550.7 11800.4 14636.6 12877.4 TRUE FALSE 15326.6727 13968.4038 12495.34791 16914.01695 15581.6802 16622.48974 16114.97081 13342.7528 15909.66501 12457.21149 1.230345387 1.12131064 1.003061393 1.357769109 1.25081606 1.334366824 1.29362585 1.07108664 1.277144971 1 13.60469354 -3.948338942 15.29716459 1.20140604 1.185928317 0 0.127652303 0 0 0.029284647 0 0.000112632 3.948338942 -0.015477723 GREVS(ph)PSDVR ddPTM_A459_MK2206_30min_R1 1 GREVSPSDVR 10 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 GREVS(0.772)PS(0.228)DVR 74.537 0.0342 8507500 5048 5087.8 5108.3 3733 4636.8 4923.9 4917.5 4461.7 3908.9 2643.9 TRUE FALSE 4618.641092 4756.583295 4761.562829 4020.516307 4452.106437 5202.686963 4589.462547 4422.691827 4315.244143 2971.446292 1.554341098 1.600763678 1.602439472 1.353050303 1.498296116 1.750893824 1.544521454 1.488397027 1.452236964 1 11.53694959 -8.981453998 1.208788057 0.999975781 1.555521067 0.753236461 0.094270406 0.933400615 1.91906949 0.096642757 0.029274054 1.04E-09 8.981453998 0.555545287 GRGPS(ph)PEGSSSTESSPEHPPK ddPTM_A459_MK2206_30min_R1 1 GRGPSPEGSSSTESSPEHPPK 21 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GRGPS(0.679)PEGS(0.003)S(0.009)S(0.044)T(0.071)ES(0.191)S(0.003)PEHPPK 115.84 0.00097131 0 992.84 480.91 725.34 540.73 947.41 890.56 935.99 687.88 526.27 462.83 TRUE FALSE 908.3937444 449.6026716 676.1059417 582.3771183 909.6726535 940.9827376 873.5518149 681.8659377 580.9776498 520.1688746 1.746343906 0.86433982 1.299781619 1.119592399 1.748802548 1.808994701 1.679361949 1.310854938 1.116901987 1 9.022836265 -6.238568855 24.50711089 1.489698046 1.232449622 0.062326423 0.32135439 1380.828876 1479638.36 0.095860789 0.123660833 5.77E-07 6.238568855 -0.257248424 GRLDSSEMDHS(ph)ENEDYTMSSPLPGK ddPTM_A459_MK2206_30min_R1 1 GRLDSSEMDHSENEDYTMSSPLPGK 25 1 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 GRLDS(0.023)S(0.023)EMDHS(0.941)ENEDY(0.004)T(0.004)MS(0.005)S(0.001)PLPGK 55.846 0.0068697 8391000 786.98 753.96 902.92 891.59 838.34 733.37 668.42 668.58 563.52 938.17 TRUE FALSE 720.0432184 704.877067 841.6323061 960.2604163 804.9471426 774.8927756 623.8309214 662.7346755 622.0999206 1054.397582 0.682895362 0.668511649 0.798211529 0.910719478 0.763418995 0.734915167 0.591646768 0.628543432 0.590005071 1 10.04220325 -7.027024054 10.89357565 0.670377187 0.767378365 0.026687568 0.127076574 1.789081677 714.6571029 0.047208672 0.037303187 9.40E-08 7.027024054 0.097001178 GRLS(ph)PVPVPR ddPTM_A459_MK2206_30min_R1 3 GRLSPVPVPR 10 1 Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPL9 Q9UKM9-2 RALY RNA-binding protein Raly 1 GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR 89.189 0.017154 1405710000 5644.7 6008.4 5874.4 5103.4 6302 5313.8 6360.2 5836.6 5171.5 4861.2 TRUE FALSE 5164.588623 5617.252068 5475.662095 5496.464752 6050.977995 5614.662764 5935.922663 5785.571222 5709.095931 5463.442156 0.945299406 1.028152565 1.002236674 1.006044284 1.1075395 1.027678633 1.086480371 1.058960827 1.044963188 1 12.41559447 -2.889223368 0.59787367 1.054625149 5.06E-10 0.439554152 0.033216956 26.55735329 1.130791534 0.014835214 31.20976626 0.001290555 2.889223368 -1.054625149 GRLS(ph)PVPVPR ddPTM_A459_MK2206_30min_R2 5 GRLSPVPVPR 10 1 Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPL9 Q9UKM9-2 RALY RNA-binding protein Raly 1 GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR 80.312 0.026336 2821981000 169558.1 221828 215195.8 211882.6 214918.6 219220 210015.5 169314.8 164933.8 192112.4 TRUE FALSE 182539.5985 210812.3441 222370.3206 194571.1138 206479.8159 227562.5707 182440.2126 191444.8257 179279.4438 185843.7881 0.982220608 1.134352384 1.196544274 1.046960546 1.111039642 1.224483062 0.981685826 1.030138417 0.964678161 1 17.50373094 -7.296857374 24.88053182 0.996637101 1.117077221 0.448947796 0.066081114 558.2378469 392150.2074 0.027668228 0.018654841 5.05E-08 7.296857374 0.12044012 GRLT(ph)PSPDIIVLS(ph)DNEASSPR ddPTM_A459_MK2206_30min_R1 1 GRLTPSPDIIVLSDNEASSPR 21 1 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 2 GRLT(0.967)PS(0.033)PDIIVLS(0.536)DNEAS(0.253)S(0.211)PR 92.121 0.0020646 3225700 609.91 562.83 548.15 505.39 530.93 504.45 701.38 458.81 385.87 479.65 TRUE FALSE 558.0339517 526.1896647 510.9431052 544.3152254 509.7819338 533.0115231 654.5922199 454.7986725 425.9825673 539.0726632 1.035173901 0.976101555 0.947818615 1.009725149 0.945664599 0.988756358 1.214293109 0.843668588 0.790213633 1 9.074335941 GRLT(ph)PSPDIIVLSDNEASSPR ddPTM_A459_MK2206_30min_R2 1 GRLTPSPDIIVLSDNEASSPR 21 1 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 GRLT(0.709)PS(0.227)PDIIVLS(0.063)DNEASSPR 97.08 0.015362 0 2611.6 4254.8 3394.5 5042.5 4533.5 4219.8 3886.3 2674.1 4973.9 3509.2 TRUE FALSE 2811.546104 4043.512819 3507.670936 4630.51162 4355.492011 4380.387446 3376.024142 3023.614052 5406.520831 3394.695091 0.828217565 1.191126953 1.033280115 1.364043455 1.28302893 1.290362559 0.994499963 0.890687962 1.592638127 1 11.72906628 -4.32580521 1.854391939 1.185433115 2.54E-16 0.214386008 0.200522597 6.867612172 7.678475134 0.053274661 21.65381697 4.72E-05 4.32580521 -1.185433115 GRNDS(ph)GEENVPLDLTR ddPTM_A459_MK2206_30min_R1 5 GRNDSGEENVPLDLTR 16 1 Q6R327-3;Q6R327;Q6R327-4 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 GRNDS(1)GEENVPLDLTR;GRNDS(1)GEENVPLDLTR;GRNDS(1)GEENVPLDLTR;GRNDS(1)GEENVPLDLTR;GRNDS(1)GEENVPLDLTR 255.93 7.84E-30 64673200 6465.62 8035.41 7661.38 5583.63 7820.28 7499.99 8380.81 6711 7120.94 6828.12 TRUE FALSE 5915.685067 7512.303348 7141.346871 6013.68215 7508.781688 7924.632952 7821.741457 6652.326435 7861.187196 7674.039055 0.770869815 0.978924305 0.930585161 0.783639763 0.978465399 1.032654759 1.019247022 0.866861165 1.024387176 1 12.90577039 -6.415369614 11.22386759 0.984803338 0.878734335 0.395887469 0.072518295 0.663999152 65.76695558 0.022592791 0.025614164 3.84E-07 6.415369614 -0.106069003 GRNDS(ph)GEENVPLDLTR ddPTM_A459_MK2206_30min_R2 3 GRNDSGEENVPLDLTR 16 1 Q6R327-3;Q6R327;Q6R327-4 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 GRNDS(1)GEENVPLDLTR;GRNDS(1)GEENVPLDLTR;GRNDS(1)GEENVPLDLTR 139.44 0.00022113 33810000 56711 64755 67831 71079 74851 74474 76955 54377 59548 71885 TRUE FALSE 61052.83776 61539.36086 70092.45169 65271.61833 71911.97364 77308.16026 66850.71606 61484.2606 64727.3774 69539.39834 0.877960397 0.884956763 1.007953094 0.938627884 1.034118433 1.111717416 0.961335842 0.884164403 0.930801516 1 16.08554296 -5.25055613 22.50570219 0.983432847 0.881458491 0.322585924 0.059199825 246.9201743 510599.0309 0.016900256 0.043534921 5.62E-06 5.25055613 -0.101974356 GRNS(ph)ATSADEQPHIGNYR ddPTM_A459_MK2206_30min_R2 2 GRNSATSADEQPHIGNYR 18 1 Q7KZI7-14;E9PC69;Q7KZI7-13;E7ETY4;Q7KZI7-15;Q7KZI7-16;Q7KZI7-3;Q7KZI7-9;Q7KZI7-8;Q7KZI7-11;Q7KZI7-6;Q7KZI7;Q7KZI7-12;Q7KZI7-4;Q7KZI7-5;Q7KZI7-2;Q7KZI7-7;Q7KZI7-10;F5H4F6;F5H6N2;F5H4J8 Q7KZI7-14 MARK2 Serine/threonine-protein kinase MARK2 1 GRNS(0.993)AT(0.003)S(0.003)ADEQPHIGNYR;GRNS(0.992)AT(0.006)S(0.002)ADEQPHIGNYR 118.44 0.00054838 16735000 22261.3 24096.5 27483 25333 25434 24802 24462 17928.4 22679.9 23133.7 TRUE FALSE 23965.64224 22899.90285 28399.2695 23263.21286 24435.33336 25745.85749 21250.11002 20271.70344 24652.55671 22378.84926 1.070905924 1.023283306 1.26902278 1.039517832 1.091894095 1.150454931 0.94956223 0.905842083 1.101600731 1 14.44984823 -7.264593107 24.99424664 0.981404765 1.107225211 0.346831415 0.079213921 310.2771278 2459022.048 0.031874061 0.022499492 5.44E-08 7.264593107 0.125820446 GRPGS(ph)PLAAEETPGR ddPTM_A459_MK2206_30min_R1 3 GRPGSPLAAEETPGR 15 1 I3L4Y1 I3L4Y1 ABR 1 GRPGS(1)PLAAEETPGR;GRPGS(1)PLAAEETPGR;GRPGS(1)PLAAEETPGR 122.5 0.0073623 19090200 4688.1 4499.47 4339.81 3693.07 6819.4 6785.9 6452 4419.12 3770.38 3783.88 TRUE FALSE 4289.352477 4206.553685 4045.235789 3977.510891 6547.768858 7170.111794 6021.598852 4380.4841 4162.324493 4252.655621 1.008629162 0.989159259 0.95122581 0.935300491 1.539689418 1.686031608 1.415962022 1.030058507 0.97875889 1 12.05414832 -6.236631146 24.25571979 1.304177688 0.970952023 0.306338062 0.221528328 695.873302 680374.6264 0.072961622 0.094146053 5.80E-07 6.236631146 -0.333225665 GRPLAEESEQER ddPTM_A459_MK2206_30min_R1 1 GRPLAEESEQER 12 1 Q8N357 Q8N357 SLC35F6 Solute carrier family 35 member F6 0 106.79 0.012921 0 1766.7 1501.4 1812.5 1418.7 1836.6 1761.1 1524.2 1809.7 1123.3 1120.1 FALSE TRUE 1616.432888 1403.658587 1689.47255 1527.96852 1763.444333 1860.81196 1422.523399 1793.877984 1240.071055 1258.866444 1.284038426 1.115017875 1.34205861 1.213765389 1.400819238 1.478164716 1.130003429 1.424994678 0.985069592 1 10.29790952 -8.276638339 24.59661985 0.992534667 1.294880543 0.534743153 0.114155723 577.5129891 934583.3455 0.107195558 0.028133879 5.29E-09 8.276638339 0.302345875 GRPYDYNGPR ddPTM_A459_MK2206_30min_R1 3 GRPYDYNGPR 10 1 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 ;; 146.11 0.0024672 11111500 3650.1 3401.1 3524.2 3184.77 4042.1 3823.5 3514.44 3314 3194 2979.53 FALSE TRUE 3339.639828 3179.687772 3284.987123 3430.061537 3881.094598 4039.983266 3279.99812 3285.026047 3526.02773 3348.656671 0.997307325 0.949541289 0.980986541 1.024309708 1.159000453 1.206448933 0.979496689 0.980998164 1.052967825 1 11.70936675 -5.912482429 4.102528165 1.067087162 0.973898782 0.233538683 0.070057527 0.342207356 10.86260817 0.022556428 0.034416732 1.22E-06 5.912482429 -0.093188381 GRPYDYNGPR ddPTM_A459_MK2206_30min_R2 1 GRPYDYNGPR 10 1 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 132.25 0.0069666 3765700 8473.6 8653.2 8837.8 11060 9567 10101 9154.3 8296.3 8958.4 7508.4 FALSE TRUE 9122.345331 8223.494671 9132.447841 10156.36262 9191.35151 10485.40063 7952.329414 9380.654895 9737.585439 7263.401523 1.255932954 1.132182304 1.257323833 1.398292878 1.265433486 1.443593694 1.094849209 1.291496121 1.340637084 1 12.82642962 -10.69138055 6.174159645 0.999997985 1.274188124 0.401465673 0.10091465 2.82E-06 3.80E-07 0.098403754 0.023866241 2.04E-11 10.69138055 0.274190139 GRRS(ph)PILLPK ddPTM_A459_MK2206_30min_R1 1 GRRSPILLPK 10 2 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 GRRS(1)PILLPK 92.792 0.029534 58644000 4744 5202.8 4929.4 5077.7 5631.4 4927.3 4518.9 5059.7 3443.6 2569.4 TRUE FALSE 4340.497888 4864.096774 4594.806062 5468.785334 5407.089413 5206.279468 4217.452426 5015.463576 3801.574543 2887.71667 1.503089944 1.684409286 1.591155431 1.893809525 1.872444575 1.802905223 1.460479994 1.736826756 1.316463829 1 11.49571348 -8.516410018 1.620392339 0.995028244 1.70802766 0.718341861 0.139909492 0.218029936 1.274666431 0.139452858 0.040526902 3.05E-09 8.516410018 0.712999417 GRS(ph)ECDSSPEPK ddPTM_A459_MK2206_30min_R1 1 GRSECDSSPEPK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GRS(1)ECDSSPEPK 131.86 0.0093307 2255800 887.33 918.3 1150.9 971.32 1194 804.44 756.83 1100.7 1209.8 1045 TRUE FALSE 811.8579239 858.5185031 1072.780115 1046.131235 1146.440452 849.9866976 706.3432516 1091.076696 1335.563039 1174.462489 0.691259135 0.73098844 0.913422203 0.890731926 0.976140543 0.723724006 0.601418315 0.929000888 1.1371696 1 10.19778492 -7.999584831 24.99880579 1.056751659 0.798159989 0.504427721 0.111088985 12.14489591 731308.3064 0.06696527 0.03168004 1.00E-08 7.999584831 -0.25859167 GRS(ph)FAGNLNTYK ddPTM_A459_MK2206_30min_R1 1 GRSFAGNLNTYK 12 1 Q01813;Q01813-2;B1APP6 Q01813 PFKP "ATP-dependent 6-phosphofructokinase, platelet type" 1 GRS(1)FAGNLNTYK 168.89 0.0017573 102000000 2906.4 2768.2 2721.9 2670.4 3203.9 2807.4 2969.3 2967.9 2231 1668.5 TRUE FALSE 2659.195418 2587.989677 2537.145012 2876.074671 3076.281879 2966.352562 2771.223415 2941.951963 2462.920434 1875.206377 1.418081472 1.380109256 1.352995085 1.533737676 1.640503103 1.581880586 1.477823161 1.568868366 1.313413001 1 10.87283367 -8.58638375 3.625838924 1.000298118 1.493314167 0.752729118 0.087079251 0.160383995 5.728118506 0.095876428 0.025233613 2.59E-09 8.58638375 0.493016049 GRS(ph)IDQDYER ddPTM_A459_MK2206_30min_R2 1 GRSIDQDYER 10 1 Q9UDY2-7;Q9UDY2-4;A0A3B3IU51;A0A1B0GTW1;A0A2R8YDH4;A0A3B3ITE1;Q9UDY2-2;Q9UDY2-6;Q9UDY2-3;Q9UDY2;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3ISZ5;A0A3B3IRI3 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 GRS(1)IDQDYER 116.98 0.02927 13705000 38485 45313 43985 62201 51089 61661 41675 38522 50841 41615 TRUE FALSE 41431.44119 43062.82231 45451.43795 57118.97933 49082.98916 64007.55256 36203.02244 43556.95767 55263.05828 40257.10596 1.029170881 1.069694934 1.129028947 1.418854584 1.219237896 1.589969051 0.899295207 1.081969422 1.372752883 1 15.29695584 -5.530674726 24.92803429 1.234022785 1.06191512 0.12020488 0.192714121 354.1465482 1132397.887 0.052883172 0.091818465 2.95E-06 5.530674726 -0.172107666 GRS(ph)PDELPSAGGDGGK ddPTM_A459_MK2206_30min_R2 2 GRSPDELPSAGGDGGK 16 1 B4E2I7;A0A2R8Y5N1;A0A140T8Z0;A0A0G2JH68;O60610-2;O60610-3;O60610 B4E2I7 DIAPH1 Protein diaphanous homolog 1 1 GRS(1)PDELPSAGGDGGK;GRS(1)PDELPSAGGDGGK 70.072 0.023945 14751100 81745 87928 93194 96951 86346 84192 110130 83467 72365 94909 TRUE FALSE 88003.46005 83561.62338 96301.04145 89029.79317 82955.62219 87395.98556 95669.79871 94376.42349 78659.17689 91812.1271 0.958516732 0.910137103 1.04889239 0.969695355 0.903536655 0.951900237 1.042017016 1.027929822 0.8567406 1 16.48639711 GRS(ph)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK ddPTM_A459_MK2206_30min_R1 8 GRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFK 32 1 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 1 GRS(0.977)PQPPAEEDEDDFDDT(0.023)LVAIDTYNCDLHFK;GRS(0.753)PQPPAEEDEDDFDDT(0.247)LVAIDTYNCDLHFK;GRS(0.77)PQPPAEEDEDDFDDT(0.23)LVAIDTYNCDLHFK;GRS(0.91)PQPPAEEDEDDFDDT(0.09)LVAIDTYNCDLHFK;GRS(0.902)PQPPAEEDEDDFDDT(0.098)LVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(0.63)PQPPAEEDEDDFDDT(0.37)LVAIDTYNCDLHFK;GRS(0.993)PQPPAEEDEDDFDDT(0.007)LVAIDTYNCDLHFK 180.7 6.51E-35 340999500 20698.49 22845.36 24493.83 18678.13 22320.2 20563.71 24607.52 22251.77 21966.18 21855.59 TRUE FALSE 18937.97473 21358.12291 22831.25706 20116.72281 21431.13917 21728.00949 22965.99724 22057.22512 24249.64302 24563.22549 0.770988922 0.869516217 0.929489373 0.818977248 0.872488802 0.884574768 0.934974816 0.897977553 0.987233661 1 14.5842124 -1.522878794 0.079533844 1.115537841 0.316846555 0.650756431 0.039522119 132.0202303 0.76893378 1.174223835 11.59862816 0.029999997 1.522878794 -0.798691287 GRS(ph)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK ddPTM_A459_MK2206_30min_R2 2 GRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFK 32 1 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 1 GRS(0.977)PQPPAEEDEDDFDDT(0.023)LVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK 111.4 1.73E-12 6964600 12246.4 13327.1 13502.6 12840.7 13781.9 12828.8 14096.7 12133.8 12782.6 13095.6 TRUE FALSE 13183.9938 12665.29559 13952.76994 11791.57373 13240.75336 13317.00897 12245.78636 13719.72932 13894.40744 12668.29164 1.040708106 0.9997635 1.101393174 0.930794306 1.045188549 1.051207957 0.966648598 1.08299759 1.096786199 1 13.62893437 -7.801557817 24.99955152 1.067418959 1.02059449 0.11362038 0.050530842 299.7252273 186768.2536 0.02623993 0.012605464 1.58E-08 7.801557817 -0.046824469 GRS(ph)PS(ph)PIGVGSEMCR ddPTM_A459_MK2206_30min_R2 1 GRSPSPIGVGSEMCR 15 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 2 GRS(1)PS(1)PIGVGSEMCR 142.19 0.0025001 0 11657 10192 10316 13789 12864 11977 14994 12594 13932 14238 TRUE FALSE 12549.46888 9685.880101 10659.93029 12662.39459 12358.89472 12432.79313 13025.26979 14240.07904 15143.78018 13773.41523 0.911137047 0.703230095 0.773949679 0.919335864 0.897300671 0.902665964 0.945681922 1.033881489 1.099493476 1 13.74959871 -6.939181515 0.693872127 1.05626854 0.794221123 0.665097509 0.063774344 0.430544579 0.441166097 0.051692762 0.04455243 1.15E-07 6.939181515 -0.262047417 GRS(ph)YDSSMESR ddPTM_A459_MK2206_30min_R1 1 GRSYDSSMESR 11 1 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 GRS(0.997)YDS(0.002)SMESR 130.19 0.011593 5708500 1861.8 1979.6 2270 2003.7 2447.3 2268.4 2376.8 2299.7 1885.6 1716.2 TRUE FALSE 1703.444133 1850.72768 2115.918725 2158.025321 2349.818859 2396.834848 2218.248009 2279.593965 2081.614868 1928.815813 0.883155417 0.959514987 1.097004033 1.118834316 1.218270217 1.242645789 1.150056939 1.181861923 1.079219101 1 10.91349967 -5.201091212 1.592714808 1.158200913 0.865933021 0.637990001 0.066078274 0.308207653 1.240167637 0.019070902 0.10867393 6.29E-06 5.201091212 -0.292267892 GRSECDS(ph)SPEPK ddPTM_A459_MK2206_30min_R1 1 GRSECDSSPEPK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GRS(0.001)ECDS(0.989)S(0.011)PEPK 94.532 0.010377 8176900 6011.7 6390.4 5990.4 5839.8 4611.6 4071 5351.6 5815 1374.7 3328.7 TRUE FALSE 5500.373346 5974.383798 5583.788338 6289.582408 4427.910207 4301.496502 4994.604529 5764.160068 1517.604984 3741.084486 1.470261729 1.596965752 1.492558738 1.681219024 1.183590005 1.149799348 1.335068627 1.540772492 0.405659105 1 11.86924083 -7.494958375 0.569137805 0.859727822 1.558610044 0.437061028 0.268712267 0.824897148 0.556039297 0.253679125 0.172660261 3.20E-08 7.494958375 0.698882222 GRSECDS(ph)SPEPK ddPTM_A459_MK2206_30min_R2 1 GRSECDSSPEPK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GRS(0.003)ECDS(0.605)S(0.392)PEPK 64.244 0.045045 3159200 31158 34798 32262 36083 30468 34347 35086 34237 41104 48456 TRUE FALSE 33543.48044 33069.98192 33337.59898 33134.90348 29271.67323 35654.09915 30479.16605 38711.89345 44679.15162 46874.88469 0.71559601 0.705494683 0.711203861 0.70687968 0.624463898 0.760622653 0.650223809 0.825855759 0.953157579 1 15.51652752 -8.108932552 2.288648751 0.991155407 0.697067314 0.898591203 0.037615541 0.084140524 0.789397035 0.030835181 0.0096841 7.78E-09 8.108932552 -0.294088093 GRSECDSS(ph)PEPK ddPTM_A459_MK2206_30min_R1 3 GRSECDSSPEPK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GRSECDS(0.216)S(0.784)PEPK;GRSECDS(0.01)S(0.99)PEPK;GRSECDS(0.102)S(0.898)PEPK 144.51 0.0034978 74752000 18909.9 19888.5 19917.1 19345.9 13773.9 11950 15147.5 16234.8 4281.59 10583 TRUE FALSE 17301.51371 18593.75504 18565.18274 20835.92457 13225.2564 12626.59867 14137.03791 16092.86086 4726.676602 11894.10194 1.454629681 1.563275238 1.560873014 1.751786279 1.111917189 1.061584871 1.188575479 1.353011849 0.397396678 1 13.53795872 -6.868003413 0.711779921 0.884052321 1.600417516 0.536529058 0.249813194 0.58645222 0.640969126 0.191397022 0.173909252 1.36E-07 6.868003413 0.716365195 GRSECDSS(ph)PEPK ddPTM_A459_MK2206_30min_R2 1 GRSECDSSPEPK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GRSECDS(0.031)S(0.969)PEPK 133.48 0.0082418 12212000 46757 68937 62125 61704 65581 49130 73371 53306 57597 63816 TRUE FALSE 50336.75187 65513.68882 64196.21649 56662.58582 63005.96042 50999.67658 63737.29957 60273.27723 62606.68295 61733.68915 0.815385449 1.061230743 1.039889522 0.917855171 1.020609027 0.826123909 1.032455705 0.976343356 1.014141287 1 15.91377039 GRSPQPPAEEDEDDFDDT(ph)LVAIDTYNCDLHFK ddPTM_A459_MK2206_30min_R2 1 GRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFK 32 1 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 1 GRS(0.031)PQPPAEEDEDDFDDT(0.969)LVAIDTYNCDLHFK 77.63 7.62E-06 2228600 9186.6 12692 12791 13383 14606 12080 14861 10985 11182 15794 TRUE FALSE 9889.933159 12061.73374 13217.44556 12289.56609 14032.49505 12539.71286 12909.73285 12420.77722 12154.59015 15278.64307 0.647304418 0.789450587 0.865092894 0.804362405 0.918438567 0.820734721 0.84495284 0.812950283 0.795528117 1 13.8992288 -14.5228785 0.023553679 2.08252571 8.19E-12 0.475715906 0.062882206 2468.050339 4.376993626 275.0471597 134.908154 3.00E-15 14.5228785 -2.08252571 GRT(ph)SSTNEDEDLNPEQK ddPTM_A459_MK2206_30min_R1 1 GRTSSTNEDEDLNPEQK 17 1 Q99081;Q99081-3;B4DGI9;Q99081-4;Q99081-2;B4DZP2;F5GY10 Q99081 TCF12 Transcription factor 12 1 GRT(0.35)S(0.35)S(0.229)T(0.07)NEDEDLNPEQK 93.729 0.0099339 13542000 4787.7 4351.3 4127.5 3951.2 7408.9 6463.4 5978.9 4945 2586.7 1694.8 TRUE FALSE 4380.480974 4068.029579 3847.3368 4255.522109 7113.787824 6829.352122 5580.05849 4901.766386 2855.596722 1904.764619 2.299749234 2.135712486 2.019848942 2.234145923 3.734733286 3.585404755 2.929526533 2.573423686 1.499186142 1 10.89539701 -6.030066012 24.95151827 2.728366248 2.146302853 0.026224717 0.796840287 1612.981925 1338597.362 0.239718331 0.309949011 9.33E-07 6.030066012 -0.582063395 GRTRMGAVELSSTDHMDRR ddPTM_A459_MK2206_30min_R1 1 GRTRMGAVELSSTDHMDRR 19 3 K7ER99 K7ER99 FXYD5 0 61.167 0.020634 2090400 359.85 477.48 359.41 333.11 299.05 266.47 356.99 328.34 307.61 359.49 FALSE TRUE 329.2428679 446.3959652 335.0142506 358.7661899 287.1382053 281.5573011 333.1758485 325.469358 339.5871603 404.0263352 0.814904473 1.104868486 0.829189143 0.88797724 0.710691805 0.696878586 0.824638939 0.805564711 0.840507488 1 8.658305523 -5.485787811 22.47513241 0.809758278 0.961672377 0.205771114 0.103969509 215.9899378 130876.5333 0.026155621 0.054401801 3.27E-06 5.485787811 0.151914099 GRTSS(ph)TNEDEDLNPEQK ddPTM_A459_MK2206_30min_R1 2 GRTSSTNEDEDLNPEQK 17 1 Q99081;Q99081-3;B4DGI9;Q99081-4;Q99081-2;B4DZP2;F5GY10 Q99081 TCF12 Transcription factor 12 1 GRTS(0.024)S(0.899)T(0.077)NEDEDLNPEQK;GRT(0.003)S(0.017)S(0.885)T(0.095)NEDEDLNPEQK 289.81 4.79E-75 14010100 4281 5030.3 4641.6 5083.3 4544.9 3440.6 3942.8 4784.5 3230 2186.56 TRUE FALSE 3916.87847 4702.826556 4326.541124 5474.816647 4363.867009 3635.403799 3679.783006 4742.669621 3565.770059 2457.44756 1.593880794 1.913703727 1.760583295 2.227846785 1.775772179 1.479341353 1.497400419 1.929916918 1.451005554 1 11.26294492 -6.634882317 4.956801789 1.532889929 1.883266762 0.344300285 0.25935245 0.27446285 10.81518278 0.085253746 0.084962439 2.32E-07 6.634882317 0.350376833 GRTSS(ph)TNEDEDLNPEQK ddPTM_A459_MK2206_30min_R2 2 GRTSSTNEDEDLNPEQK 17 1 Q99081;Q99081-3;B4DGI9;Q99081-4;Q99081-2;B4DZP2;F5GY10 Q99081 TCF12 Transcription factor 12 1 GRT(0.033)S(0.033)S(0.467)T(0.467)NEDEDLNPEQK;GRT(0.126)S(0.126)S(0.374)T(0.374)NEDEDLNPEQK 114.1 0.00096168 30880000 62385 140456 106277 123003 141858 110705 105461 88693 124382 94210 TRUE FALSE 67161.24357 133481.1593 109820.2221 112953.2614 136287.9421 114917.9563 91613.84402 100285.4796 135200.5215 91135.93542 0.736934813 1.464638056 1.205015581 1.239393231 1.495435818 1.260951082 1.00524391 1.100394473 1.483503965 1 16.47573241 GRWES(ph)QQDVSQTTVSR ddPTM_A459_MK2206_30min_R1 4 GRWESQQDVSQTTVSR 16 1 Q9NQT8;H0YBA8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 GRWES(1)QQDVSQTTVSR;GRWES(1)QQDVSQTTVSR;GRWES(0.999)QQDVS(0.001)QTTVSR;GRWES(0.997)QQDVS(0.003)QTTVSR 210.2 2.28E-07 29339300 6015.8 5419.77 5014.52 5003.77 6136.7 5511.95 5774.7 4877.04 4617.17 3736.95 TRUE FALSE 5504.12462 5066.941988 4674.148354 5389.161232 5892.262244 5824.031846 5389.4803 4834.400553 5097.141344 4199.911579 1.310533452 1.206440158 1.112915895 1.283160641 1.402949118 1.386703443 1.283236611 1.151071984 1.213630632 1 12.03614324 -8.659658348 1.076432142 1.004404101 1.278090227 0.486981081 0.084753715 0.675310215 1.629071331 0.091815514 0.029378684 2.19E-09 8.659658348 0.273686126 GRWES(ph)QQDVSQTTVSR ddPTM_A459_MK2206_30min_R2 1 GRWESQQDVSQTTVSR 16 1 Q9NQT8;H0YBA8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 GRWES(1)QQDVSQTTVSR 62.002 0.036841 8113700 16964 17906 19445 13596 16454 18241 16216 12358 14530 16873 TRUE FALSE 18262.77688 17016.81408 20093.28659 12485.16331 15807.93329 18935.17404 14086.81972 13973.23303 15793.79314 16322.43539 1.118875734 1.042541365 1.231022584 0.764908116 0.968478839 1.160070393 0.863034185 0.856075254 0.967612538 1 13.99456871 -5.747870593 24.99922825 0.941174836 1.121986007 0.397593092 0.107446828 260.4044204 479766.8896 0.03000089 0.0515979 1.79E-06 5.747870593 0.180811171 GS(ph)ESPNSFLDQESR ddPTM_A459_MK2206_30min_R1 2 GSESPNSFLDQESR 14 0 A0A5H1ZRR2;Q6P9H4;Q5T4Y8;G9CGD6-3;G9CGD6;G9CGD6-2 A0A5H1ZRR2 CNKSR3 Connector enhancer of kinase suppressor of ras 3 1 GS(0.648)ES(0.352)PNSFLDQESR;GS(0.917)ES(0.081)PNS(0.001)FLDQESR 241.3 1.28E-19 35674000 5137.1 5140.4 4379 4007.5 4904.7 5187.5 5565 4555.8 4204.5 4790.7 TRUE FALSE 4700.162669 4805.759026 4081.765681 4316.158344 4709.335413 5481.211767 5193.769004 4515.969121 4641.572821 5384.208084 0.872953384 0.89256562 0.758099542 0.801632901 0.874657023 1.018016333 0.964630067 0.838743423 0.862071589 1 12.39451845 -6.52728503 24.96275361 0.930357291 0.831419332 0.390724857 0.062041796 149.1021467 844692.9752 0.022133721 0.022218776 2.97E-07 6.52728503 -0.098937959 GS(ph)ESPNSFLDQEYR ddPTM_A459_MK2206_30min_R2 1 GSESPNSFLDQEYR 14 0 A0A2R8YE27;A0A2R8YE71;A0A2R8Y7K8;A0A2R8Y5S6;A0A2R8Y622;A0A2R8YGJ7;A0A2U3TZH5;A0A2R8Y700;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2-4;Q8WXI2-2;Q8WXI2-5;Q8WXI2;A0A2R8Y604 A0A2R8YE27 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 GS(0.626)ES(0.349)PNS(0.024)FLDQEY(0.001)R 85.473 0.024556 12703000 11169 11772 9556.2 13272 11312 13371 15052 12000 10610 10447 TRUE FALSE 12024.10723 11187.4196 9874.798938 12187.63514 10867.83404 13879.84277 13075.65432 13568.4412 11532.83862 10106.11525 1.189785287 1.106995055 0.977111254 1.205966373 1.075372067 1.3734103 1.293835861 1.342597118 1.141174263 1 13.30294092 -5.94945531 14.90264115 1.225927958 1.092611675 0.143922369 0.119940768 3.63491748 1069.305899 0.03391956 0.050313203 1.12E-06 5.94945531 -0.133316283 GS(ph)FSQADVHR ddPTM_A459_MK2206_30min_R2 2 GSFSQADVHR 10 0 Q2TAM5;E9PKH5;A0A087X0W8;Q04206-2;Q04206-3;Q04206-4;Q04206 Q2TAM5 RELA Transcription factor p65 1 GS(0.974)FS(0.026)QADVHR;GS(0.962)FS(0.038)QADVHR 90.793 0.019142 7197200 36718 46972 37891 45612 49697 45450 47172 38423 41448 44038 TRUE FALSE 39529.15831 44639.43878 39154.26703 41885.35369 47745.64607 47179.6316 40978.25974 43445.01803 45053.07212 42601.04367 0.927891782 1.047848478 0.919091732 0.983200177 1.120762356 1.107475957 0.961907414 1.019811119 1.057557943 1 15.37860115 -6.026490632 24.82994845 1.045259162 0.969553025 0.315278936 0.054569781 868.2970961 813863.2489 0.016574799 0.021474764 9.41E-07 6.026490632 -0.075706137 GS(ph)FSSENYWR ddPTM_A459_MK2206_30min_R2 1 GSFSSENYWR 10 0 Q6P6C2-3;Q6P6C2;Q6P6C2-1;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 GS(0.955)FS(0.035)S(0.011)ENYWR 95.273 0.022942 6589300 13953 12647 8822.4 10864 9125.5 8592.9 13275 10549 10730 12398 TRUE FALSE 15021.25241 12018.96837 9116.534413 9976.376448 8767.187018 8919.908831 11531.97655 11927.79052 11663.276 11993.45428 1.252454219 1.002127335 0.760125832 0.831818442 0.730997661 0.743731424 0.961522535 0.994525034 0.972470127 1 13.54995961 -10.41872681 24.66175298 1 0.905122532 0.021661011 0.151169703 0 0 0.15766877 0.038240294 3.81E-11 10.41872681 -0.094877468 GS(ph)GFSLDVIDGPISQR ddPTM_A459_MK2206_30min_R1 2 GSGFSLDVIDGPISQR 16 0 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 GS(0.995)GFS(0.005)LDVIDGPISQR;GS(1)GFSLDVIDGPISQR 185.63 7.73E-07 6050900 1297.34 1061.36 855.49 875.36 1184.62 1268.9 1412.56 1036.38 1496.23 1788.14 TRUE FALSE 1186.99442 992.2652711 797.4217223 942.7803789 1137.434077 1340.744021 1318.3307 1027.319039 1651.768463 2009.668283 0.590641963 0.493745798 0.396792709 0.469122385 0.565981006 0.667146928 0.655994181 0.511188363 0.821910997 1 10.97274167 -8.771260832 0.392967557 1.044882461 0.47590145 0.766109376 0.082748423 0.906511135 0.322289228 0.166509338 0.07048735 1.69E-09 8.771260832 -0.568981012 GS(ph)GGGGGGGGQGSTNYGK ddPTM_A459_MK2206_30min_R1 1 GSGGGGGGGGQGSTNYGK 18 0 Q99729-3;Q99729-4 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 GS(1)GGGGGGGGQGSTNYGK 73.498 0.017745 17673000 1529.6 685.33 1204 1046.2 1082 975.4 1271.5 1445.4 701.63 1074 TRUE FALSE 1399.499488 640.7148924 1122.275835 1126.778505 1038.901649 1030.626305 1186.680555 1432.76302 774.5669493 1207.055228 1.159432854 0.530808266 0.929763451 0.933493745 0.860691064 0.853835252 0.983120347 1.186990443 0.641699676 1 10.23727597 -7.260722139 24.99979331 0.968535157 0.866310471 0.031202131 0.19051416 205.91944 7177640.331 0.072328548 0.052609103 5.49E-08 7.260722139 -0.102224685 GS(ph)GGGGGGGGQGSTNYGK ddPTM_A459_MK2206_30min_R2 2 GSGGGGGGGGQGSTNYGK 18 0 Q99729-3;Q99729-4 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 GS(1)GGGGGGGGQGSTNYGK;GS(1)GGGGGGGGQGSTNYGK 175.59 2.45E-09 17461500 31269 29444 24605 34231 27932 30133 33439 26381 24596 28798 TRUE FALSE 33662.97868 27981.85378 25425.31842 31434.2178 26835.24933 31279.73243 29048.41913 29829.08728 26735.31562 27858.32362 1.208363401 1.004434228 0.912665054 1.128359991 0.963275813 1.122814598 1.042719567 1.070742364 0.959688601 1 14.76582083 -6.868682971 0.007994565 1.57E-07 2.080955633 0.075791812 0.083457257 13359.06855 45.33469654 5781.869584 6014.779718 1.35E-07 6.868682971 2.080955476 GS(ph)GGLFSPSTAHVPDGALGQR ddPTM_A459_MK2206_30min_R1 3 GSGGLFSPSTAHVPDGALGQR 21 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GS(0.884)GGLFS(0.115)PS(0.001)T(0.001)AHVPDGALGQR;GS(1)GGLFSPSTAHVPDGALGQR;GS(0.997)GGLFS(0.003)PSTAHVPDGALGQR 116.92 5.04E-05 145446000 7049.4 5849.07 6817.4 5283.17 8128.2 7672.5 8062.3 6973.5 5981.4 6026.6 TRUE FALSE 6449.811512 5468.29448 6354.653882 5690.080669 7804.436582 8106.91032 7524.478677 6912.531425 6603.187935 6773.220707 0.952251786 0.807340365 0.938202689 0.840084934 1.15224897 1.196906268 1.110915915 1.020567869 0.974896319 1 12.72562629 -6.257146601 24.95860349 1.084749805 0.882798735 0.607187645 0.075233826 252.80734 1469844.053 0.023895718 0.029770162 5.53E-07 6.257146601 -0.20195107 GS(ph)GGLFSPSTAHVPDGALGQR ddPTM_A459_MK2206_30min_R2 4 GSGGLFSPSTAHVPDGALGQR 21 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GS(0.999)GGLFS(0.001)PSTAHVPDGALGQR;GS(1)GGLFSPSTAHVPDGALGQR;GS(0.998)GGLFS(0.002)PSTAHVPDGALGQR;GS(0.998)GGLFS(0.002)PSTAHVPDGALGQR 107.85 8.51E-05 124393000 101484 136933 116418 157600 170685 173125 170516 129256 137248 130486 TRUE FALSE 109253.6931 130133.1063 120299.318 144723.5759 163983.0493 179713.3932 148127.0444 146150.203 149185.583 126228.2525 0.86552488 1.030934864 0.953030052 1.14652285 1.299099417 1.423717667 1.173485661 1.157824814 1.18187157 1 16.94567533 -5.858467862 3.577493189 1.223352112 0.955538369 0.521324015 0.10895722 0.182312748 4.518345621 0.032333168 0.051272016 1.39E-06 5.858467862 -0.267813743 GS(ph)GIFDESTPVQTR ddPTM_A459_MK2206_30min_R2 1 GSGIFDESTPVQTR 14 0 A6NGP5;Q9H910;Q9H910-3;H3BMV3;H3BTV5;Q9H910-2;H3BU16;H3BMT0 A6NGP5;Q9H910-2 HN1L Hematological and neurological expressed 1-like protein 1 GS(1)GIFDESTPVQTR 125.47 0.0013769 2417600 7203.7 6962.5 8793.1 7974 6858 7818.7 12478 9816 6767.8 7722.9 TRUE FALSE 7755.220811 6616.752374 9086.257565 7322.498692 6588.720461 8116.246107 10839.62361 11098.9849 7356.451011 7470.902405 1.038056769 0.885669765 1.21621955 0.980135771 0.881917619 1.086380957 1.450912222 1.485628416 0.984680379 1 12.8670668 -7.014942116 22.95449267 1.270470419 1.002816078 0.264457336 0.175874797 270.714269 415878.2212 0.064808005 0.052120957 9.66E-08 7.014942116 -0.267654341 GS(ph)GLAGPK ddPTM_A459_MK2206_30min_R2 1 GSGLAGPK 8 0 Q9Y6W5 Q9Y6W5 WASF2 Wiskott-Aldrich syndrome protein family member 2 1 GS(1)GLAGPK 81.338 0.043973 26890000 40528 49520 69665 65128 67710 35562 62146 50650 56582 54614 TRUE FALSE 43630.85484 47060.90881 71987.59633 59806.83407 65051.36518 36915.33683 53986.15555 57270.12891 61503.40008 52831.94965 0.825842225 0.890766082 1.362576941 1.132020197 1.23128837 0.698731299 1.021846741 1.084005593 1.164132698 1 15.68912303 -5.024586262 24.30137354 1.083501374 0.842072962 0.241690015 0.163604746 663.4256758 655742.9326 0.043572745 0.116706332 9.45E-06 5.024586262 -0.241428412 GS(ph)IGLLLGK ddPTM_A459_MK2206_30min_R1 2 GSIGLLLGK 9 0 Q8IY63-2;Q8IY63 Q8IY63-2 AMOTL1 Angiomotin-like protein 1 1 GS(1)IGLLLGK;GS(1)IGLLLGK 112.13 0.0098724 8793200 5132.4 4699 3661.2 3326.2 4236.5 3964.8 4903.1 4008.8 4545.1 4274.5 TRUE FALSE 4695.862429 4393.094246 3412.687945 3582.3845 4067.751234 4189.28355 4576.023145 3973.751484 5017.57941 4804.057331 0.977478432 0.914455 0.71037619 0.745699781 0.84673245 0.872030299 0.952533001 0.827165708 1.044446197 1 12.23003765 -7.987118651 0.939282031 1.014445806 0.836648226 0.338455628 0.084266232 0.682275112 1.135196184 0.083272332 0.031773929 1.03E-08 7.987118651 -0.17779758 GS(ph)IGLLLGK ddPTM_A459_MK2206_30min_R2 2 GSIGLLLGK 9 0 Q8IY63-2;Q8IY63 Q8IY63-2 AMOTL1 Angiomotin-like protein 1 1 GS(1)IGLLLGK;GS(1)IGLLLGK 105.4 0.013771 5623400 33069 37260 29830 34586 28539 31302 27736 27802 28130 28049 TRUE FALSE 35600.78807 35409.72258 30824.51731 31760.21316 27418.41546 32493.21954 24094.22988 31435.81686 30576.69655 27133.76343 1.312047559 1.305005945 1.136020714 1.170505273 1.010490695 1.197519822 0.887979655 1.158549825 1.126887416 1 14.72780154 -5.336360678 1.068477187 1.06862678 1.361376745 0.524994959 0.087337082 0.664165963 1.109859166 0.029071422 0.179319989 4.61E-06 5.336360678 0.292749964 GS(ph)ISSGLEFVSHNPPSEAATPPVAR ddPTM_A459_MK2206_30min_R2 1 GSISSGLEFVSHNPPSEAATPPVAR 25 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB06;F8VRK6 Q99700;F8WB06 ATXN2 Ataxin-2 1 GS(0.68)IS(0.075)S(0.246)GLEFVSHNPPSEAATPPVAR 92.901 1.54E-05 2684200 1480.3 5641.8 3269.8 4729.6 4042.4 4392 3586.4 2417.5 3496.7 3859.4 TRUE FALSE 1593.632906 5361.636416 3378.8135 4343.176551 3883.675065 4559.140638 3115.501372 2733.475551 3800.836645 3733.468094 0.426850549 1.436100773 0.905006663 1.16330887 1.040232558 1.221154306 0.834479174 0.732154523 1.018044496 1 11.86630069 -7.294783043 24.64067409 0.873849062 1.051027788 0.057491862 0.256749091 1302.013833 962171.543 0.100364815 0.067671144 5.07E-08 7.294783043 0.177178726 GS(ph)KSPDLLMYQGPPDTAEIIK ddPTM_A459_MK2206_30min_R1 1 GSKSPDLLMYQGPPDTAEIIK 21 1 P82909 P82909 MRPS36 "28S ribosomal protein S36, mitochondrial" 1 GS(0.586)KS(0.412)PDLLMY(0.002)QGPPDTAEIIK 73.058 0.002271 15222000 3777.6 4244.7 3882.1 3780.8 3870.3 3409.4 3924.2 4316.3 3176.5 3470.4 TRUE FALSE 3456.295283 3968.369258 3618.593868 4071.997871 3716.137756 3602.437282 3662.423778 4278.563044 3506.708542 3900.339352 0.886152453 1.017442048 0.927763854 1.044011175 0.952772931 0.9236215 0.939001314 1.096971996 0.899077805 1 11.92938394 -4.745112385 24.74410914 0.977691579 0.886152155 0.180241657 0.05866705 1481.518463 2245152.564 0.013919474 0.361814176 1.80E-05 4.745112385 -0.091539425 GS(ph)LASLDSLR ddPTM_A459_MK2206_30min_R1 3 GSLASLDSLR 10 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14;O60716-27;O60716-29;O60716-25;O60716-26;O60716-31;O60716-32;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 1 GS(1)LASLDSLR;GS(1)LASLDSLR;GS(0.997)LAS(0.003)LDSLR 147.28 0.00083069 284030000 8468.5 9729.7 8431.5 7423.8 7650 6819.2 7572.1 6782.03 8422.9 7882.8 TRUE FALSE 7748.209605 9096.294762 7859.193272 7995.582362 7345.284301 7205.297211 7066.979025 6722.735427 9298.490597 8859.380776 0.874576881 1.026741596 0.88710413 0.902499008 0.829096806 0.813295804 0.797683179 0.758826784 1.049564392 1 13.11299015 -3.419463777 9.671711956 0.884261474 0.78768598 0 0.096314306 0 0 0.02224697 0 0.000380659 3.419463777 -0.096575494 GS(ph)LASLDSLR ddPTM_A459_MK2206_30min_R2 4 GSLASLDSLR 10 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14;O60716-27;O60716-29;O60716-25;O60716-26;O60716-31;O60716-32;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 1 GS(1)LASLDSLR;GS(1)LASLDSLR;GS(0.999)LAS(0.001)LDSLR;GS(1)LASLDSLR 129 0.0030223 226578600 105040 94266 85606 91475 77166 86041 93877 68735 69481 87665 TRUE FALSE 113081.9432 89584.88752 88460.06131 84001.19989 74136.07511 89315.35055 81550.83713 77718.9005 75524.33179 84804.49823 1.333442748 1.056369525 1.043105769 0.990527645 0.874199797 1.053191192 0.96163339 0.916447855 0.89056988 1 16.37185317 -1.52287875 0.820438697 0.950711692 109.91182 0.816693574 0.05312504 225.5681661 0.716440444 0.018763824 45766.56062 0.03 1.52287875 108.9611083 GS(ph)LDESSLGFGYPK ddPTM_A459_MK2206_30min_R1 4 GSLDESSLGFGYPK 14 0 Q2KJU6;Q9BUZ4 Q2KJU6 TRAF4 TNF receptor-associated factor 4 1 GS(0.967)LDES(0.032)S(0.001)LGFGYPK;GS(0.997)LDES(0.003)SLGFGYPK;GS(0.987)LDES(0.012)S(0.001)LGFGYPK;GS(0.959)LDES(0.039)S(0.002)LGFGYPK 309.49 6.87E-94 105519000 14204 14647.7 16044.2 13687.3 14971.7 14337.2 16492 13142.8 14000.2 12855.3 TRUE FALSE 12995.87521 13694.13207 14955.16441 14741.49822 14375.34549 15148.95987 15391.84877 13027.89389 15455.57089 14447.91162 0.899498527 0.947827785 1.035109073 1.020320349 0.994977397 1.048522463 1.065333813 0.901714672 1.069744286 1 13.81857335 -5.045826559 3.301462333 1.015490227 0.903630214 0.418775085 0.045495533 0.231620296 4.890997651 0.011521161 0.046777378 9.00E-06 5.045826559 -0.111860012 GS(ph)LDESSLGFGYPK ddPTM_A459_MK2206_30min_R2 3 GSLDESSLGFGYPK 14 0 Q2KJU6;Q9BUZ4 Q2KJU6 TRAF4 TNF receptor-associated factor 4 1 GS(0.999)LDES(0.001)SLGFGYPK;GS(1)LDESSLGFGYPK;GS(1)LDESSLGFGYPK 217.19 1.22E-08 33046900 131785 139359 132602 143057 154151 150970 165940 120535 125640 140635 TRUE FALSE 141874.5609 132438.6347 137022.8845 131368.7855 148098.2572 156715.2691 144151.8787 136289.3384 136567.9401 136046.0915 1.042841874 0.973483569 1.007179868 0.965619696 1.088588842 1.151927758 1.059581184 1.001787974 1.003835822 1 17.05373598 -4.438987803 15.46764441 1.030794996 1.28169372 0.004326316 0.054266517 784101.2559 2409336.423 0.01511675 6559336.386 3.64E-05 4.438987803 0.250898724 GS(ph)LPSGTTIEWLEPK ddPTM_A459_MK2206_30min_R1 1 GSLPSGTTIEWLEPK 15 0 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 GS(0.934)LPSGT(0.018)T(0.048)IEWLEPK 189.33 2.61E-05 17782000 4396.4 4452.3 3706.3 2919.7 2676.1 3266.3 3590.5 3094.5 3728.6 4333.6 TRUE FALSE 4022.463094 4162.454461 3454.726682 3144.5758 2569.50527 3451.235083 3350.984296 3067.445113 4116.201313 4870.479085 0.825886535 0.854629368 0.709319683 0.645639935 0.527567253 0.708602793 0.688019441 0.629803569 0.845132736 1 12.24984797 -8.524276527 4.030206196 0.999508482 0.69748972 0.540781371 0.088317508 0.152854305 7.463005661 0.094971225 0.024886484 2.99E-09 8.524276527 -0.302018762 GS(ph)LPSGTTIEWLEPK ddPTM_A459_MK2206_30min_R2 4 GSLPSGTTIEWLEPK 15 0 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 GS(0.999)LPS(0.001)GTTIEWLEPK;GS(0.648)LPS(0.088)GT(0.088)T(0.177)IEWLEPK;GS(0.996)LPS(0.004)GTTIEWLEPK;GS(0.843)LPS(0.144)GT(0.01)T(0.003)IEWLEPK 186.05 1.93E-05 15811700 200695 162835 156204 153570 157620 149635 165589 131255 138229 157124 TRUE FALSE 216060.3635 154748.8507 161411.7634 141022.8398 151431.0468 155329.4648 143846.9654 148410.4792 150251.9086 151997.0567 1.421477285 1.018104258 1.061940059 0.927799806 0.996276178 1.021924162 0.94637994 0.976403638 0.98851854 1 17.21368386 -4.749594159 4.114940152 0.989245084 1.47255466 0.930397329 0.035218478 0.061924158 1.981268607 0.009032399 0.092726237 1.78E-05 4.749594159 0.483309576 GS(ph)MESLALSNATGLSADGGAK ddPTM_A459_MK2206_30min_R2 2 GSMESLALSNATGLSADGGAK 21 0 A0A1X7SBR1;Q7Z3G6 A0A1X7SBR1 PRICKLE2 Prickle-like protein 2 1 GS(0.971)MES(0.029)LALSNATGLSADGGAK;GS(0.995)MES(0.005)LALSNATGLSADGGAK 252.41 3.83E-39 5476800 35867 43879 46921 43289 36933 36269 39180 38968 37414 43460 TRUE FALSE 38613.0051 41700.03267 48485.32272 39752.15023 35482.82485 37649.24221 34035.61894 44061.2514 40668.20209 42041.90376 0.918440928 0.991868325 1.153261827 0.945536398 0.84398711 0.895517064 0.80956417 1.048031784 0.967325417 1 15.35954038 -4.709961997 21.09154138 0.958161676 0.918436787 0.017480464 0.093974497 15030.32526 6154821.451 0.025451189 15.21348281 1.95E-05 4.709961997 -0.039724889 GS(ph)PATSPHLGR ddPTM_A459_MK2206_30min_R1 1 GSPATSPHLGR 11 0 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 1 GS(0.999)PAT(0.001)SPHLGR 92.151 0.01681 7509000 1375.4 1107.6 1261.4 988.62 1355.3 1496.9 2065.9 1483.8 1246.8 1443.9 TRUE FALSE 1258.415007 1035.495039 1175.779682 1064.763684 1301.315531 1581.653184 1928.08758 1470.827293 1376.409322 1622.781233 0.775468056 0.638098973 0.724546019 0.656135074 0.801904474 0.974655827 1.188137712 0.90636203 0.848179221 1 10.66425281 -6.63163141 3.185051532 0.991572922 0.697974069 0.697478628 0.088965627 0.145745895 2.944764805 0.032762412 0.0327084 2.34E-07 6.63163141 -0.293598853 GS(ph)PATSPHLGR ddPTM_A459_MK2206_30min_R2 2 GSPATSPHLGR 11 0 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 1 GS(1)PATSPHLGR;GS(0.979)PAT(0.021)SPHLGR 107.99 0.0067643 48147000 150784 156934 152674 210969 170882 228439 226300 168440 169711 150622 TRUE FALSE 162328.139 149140.8858 157764.075 193732.1578 164172.3141 237132.4062 196586.5382 190455.6863 184472.156 145707.2165 1.114070688 1.02356554 1.082747161 1.329598921 1.126727406 1.627458214 1.349188756 1.307112242 1.266046806 1 17.15271281 -5.744456483 8.104135622 1.309637612 1.067580894 0.277436974 0.154442176 0.195377935 66.64120187 0.041602838 0.069657365 1.80E-06 5.744456483 -0.242056719 GS(ph)PDGSLQTGKPSAPK ddPTM_A459_MK2206_30min_R1 4 GSPDGSLQTGKPSAPK 16 1 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 "Proline-, glutamic acid- and leucine-rich protein 1" 1 GS(0.858)PDGS(0.142)LQTGKPSAPK;GS(0.964)PDGS(0.036)LQTGKPSAPK;GS(0.792)PDGS(0.208)LQTGKPSAPK;GS(0.788)PDGS(0.212)LQTGKPSAPK 97.767 0.004095 245136900 16712.5 17345.4 17026.4 13586.1 14649.6 14666.5 17791.1 15225.3 17932.6 19472.6 TRUE FALSE 15291.01411 16216.21131 15870.69541 14632.50378 14066.07541 15496.90456 16604.28818 15092.18681 19796.75794 21885.0127 0.698697978 0.740973356 0.72518557 0.668608421 0.642726399 0.708105806 0.758705897 0.689612888 0.904580601 1 14.4176556 -8.401953098 2.98996033 0.998548855 0.703877011 0.904443773 0.032888525 0.071640318 1.208944387 0.034116025 0.009201354 3.96E-09 8.401953098 -0.294671844 GS(ph)PDGSLQTGKPSAPK ddPTM_A459_MK2206_30min_R2 6 GSPDGSLQTGKPSAPK 16 1 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 "Proline-, glutamic acid- and leucine-rich protein 1" 1 GS(0.926)PDGS(0.074)LQT(0.001)GKPSAPK;GS(0.995)PDGS(0.005)LQTGKPSAPK;GS(0.903)PDGS(0.096)LQT(0.002)GKPSAPK;GS(0.499)PDGS(0.499)LQT(0.001)GKPSAPK;GS(0.99)PDGS(0.01)LQTGKPSAPK;GS(1)PDGSLQTGKPSAPK 203.05 1.92E-06 207474400 310922 298988 295768 332058 268691 225058 318026 259881 232537 319010 TRUE FALSE 334726.4274 284140.6907 305628.7575 304927.7992 258140.8413 233622.7399 276268.8042 293848.339 252762.6479 308600.7298 1.084658573 0.920738881 0.990369523 0.988098114 0.83648811 0.757038844 0.89523056 0.952195865 0.819060435 1 18.23538195 -6.250361616 23.23404764 0.869225337 0.990193149 0.381637886 0.073884017 304.062189 637725.178 0.021869008 0.027910795 5.62E-07 6.250361616 0.120967812 GS(ph)PDGSLQTGKPSAPKK ddPTM_A459_MK2206_30min_R1 1 GSPDGSLQTGKPSAPKK 17 2 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 "Proline-, glutamic acid- and leucine-rich protein 1" 1 GS(0.829)PDGS(0.155)LQT(0.016)GKPSAPKK 67.168 0.044624 17827000 3764.2 5518.5 4701.9 4550.6 3851.3 3004.6 3396.3 4148 3630.7 3470.2 TRUE FALSE 3444.035023 5159.244647 4382.748128 4901.088 3697.894566 3174.717855 3169.739024 4111.734473 4008.124258 3900.114575 0.883059961 1.32284438 1.123748558 1.256652313 0.948150239 0.814006305 0.812729719 1.054259918 1.027693977 1 11.92930079 -6.325110153 8.15548771 0.931971013 1.157327853 0.365960447 0.130655319 0.343305948 40.78468702 0.0406817 0.046193618 4.73E-07 6.325110153 0.22535684 GS(ph)PDGSLQTGKPSAPKK ddPTM_A459_MK2206_30min_R2 1 GSPDGSLQTGKPSAPKK 17 2 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 "Proline-, glutamic acid- and leucine-rich protein 1" 1 GS(0.805)PDGS(0.194)LQT(0.002)GKPSAPKK 56.347 0.029405 20769000 37358 80684 56689 70409 81384 68265 64003 49464 62424 57950 TRUE FALSE 40218.1572 76677.34989 58578.98297 64656.35947 78188.45524 70862.87241 55599.32922 55929.11464 67853.52668 56059.09625 0.717424288 1.36779497 1.044950541 1.153360718 1.394750549 1.264074471 0.991798529 0.997681347 1.210392804 1 15.77466087 -7.271510963 24.53656348 1.049774953 1.172178337 0.068805777 0.188133485 1478.854678 3602794.866 0.076667308 0.052373515 5.35E-08 7.271510963 0.122403384 GS(ph)PEEELPLPAFEK ddPTM_A459_MK2206_30min_R1 4 GSPEEELPLPAFEK 14 0 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK 238.22 2.07E-19 89614300 9854.99 10663.11 9772.87 9147.16 11153.63 9018.09 10099.34 10100.22 8784.11 8550.21 TRUE FALSE 9016.77135 9968.939601 9109.514813 9851.675848 10709.3573 9528.686463 9425.631456 10011.91484 9697.249669 9609.474566 0.938320955 1.037407356 0.947972207 1.025204425 1.114458155 0.99159287 0.980868558 1.04187953 1.009134225 1 13.23024183 -4.011944736 2.106865892 1.017583876 7.59E-25 0.22356459 0.042411308 31.64312019 12.18696056 0.011555249 131.0633241 9.73E-05 4.011944736 -1.017583876 GS(ph)PEEELPLPAFEK ddPTM_A459_MK2206_30min_R2 5 GSPEEELPLPAFEK 14 0 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK 233.97 9.70E-14 29533900 81525.1 98350.2 90433.1 102897.2 101343.9 93512 102030.6 84779.7 81039 97279.6 TRUE FALSE 87766.72434 93466.27208 93448.09442 94490.16961 97364.62927 97070.66469 88633.85966 95860.69788 88087.62574 94105.37462 0.932643058 0.99320865 0.993015487 1.00408898 1.034634097 1.031510316 0.941857572 1.018652742 0.93605308 1 16.5219895 -4.759866397 5.126909555 0.996583091 0.928733353 0.258920141 0.031455458 0.236028467 17.06868731 0.007769636 0.057690991 1.74E-05 4.759866397 -0.067849738 GS(ph)PEPSALPPQR ddPTM_A459_MK2206_30min_R2 1 GSPEPSALPPQR 12 0 O00562-2;O00562 O00562-2 PITPNM1 Membrane-associated phosphatidylinositol transfer protein 1 1 GS(1)PEPSALPPQR 114.76 0.0056198 0 41382 39604 40599 37840 35851 36485 48618 32558 36074 42247 TRUE FALSE 44550.23774 37637.32295 41952.5504 34748.35096 34443.3096 37873.46224 42234.3982 36813.44239 39211.65131 40868.48385 1.090087851 0.920937588 1.026525734 0.850248105 0.84278413 0.926715617 1.033422193 0.900778275 0.959459408 1 15.3187011 -2.656503602 1.567271448 0.933916501 131.6991589 0.316967232 0.064030549 1330.419351 5.045578178 0.018141702 624376.9354 0.002205446 2.656503602 130.7652424 GS(ph)PETNHLIR ddPTM_A459_MK2206_30min_R2 2 GSPETNHLIR 10 0 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 GS(1)PETNHLIR;GS(1)PETNHLIR 160.86 0.00028782 14072200 31845 40588 21258 35566 32026 34066 32314 28579 31838 40063 TRUE FALSE 34283.07768 38572.45894 21966.73111 32660.14403 30768.49832 35362.4055 28071.13298 32314.37343 34607.21169 38755.74759 0.884593378 0.995270672 0.566799313 0.842717431 0.793908007 0.912442868 0.724308902 0.833795642 0.892956886 1 15.24212266 -8.55636897 2.299034721 0.999084763 0.816347325 0.211239357 0.108672308 0.51669112 6.4194067 0.103577967 0.028372233 2.78E-09 8.55636897 -0.182737437 GS(ph)PGGPEFLK ddPTM_A459_MK2206_30min_R2 2 GSPGGPEFLK 10 0 Q4VC44-2;Q4VC44;Q4VC44-4;I3L188 Q4VC44-2 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 1 GS(1)PGGPEFLK;GS(1)PGGPEFLK 126.66 0.0034191 6470100 44913 43121 39466 47757 50502 38968 47692 37702 41238 48624 TRUE FALSE 48351.57381 40979.67384 40781.77674 43855.10033 48519.03773 40450.95455 41429.98311 42629.78085 44824.8067 47037.40286 1.02793885 0.871214637 0.867007408 0.932345276 1.031499079 0.859974235 0.880788066 0.906295379 0.95296092 1 15.52152078 -8.557180481 3.79017163 0.999898319 0.919355114 0.141875013 0.058987325 0.436094183 18.90077649 0.057520142 0.015109646 2.77E-09 8.557180481 -0.080543205 GS(ph)PGGYLGAK ddPTM_A459_MK2206_30min_R2 4 GSPGGYLGAK 10 0 O60551 O60551 NMT2 Glycylpeptide N-tetradecanoyltransferase 2 1 GS(1)PGGYLGAK;GS(0.996)PGGY(0.004)LGAK;GS(1)PGGYLGAK;GS(1)PGGYLGAK 159.09 0.00046461 86732000 439615 319415 330204 364289 298887 281368 395895 316478 246999 413848 TRUE FALSE 473272.2624 303553.3156 341212.8366 334525.4234 287151.1946 292075.6564 343913.5109 357842.7612 268482.5265 400344.1737 1.182163482 0.758230881 0.852298744 0.835594584 0.717260831 0.729561401 0.859044626 0.893837815 0.670629284 1 18.61088128 -4.756853757 24.99907807 0.80740538 1.182164044 0.589200661 0.092385874 93.42305066 509244.9368 0.021852017 0.170707092 1.75E-05 4.756853757 0.374758665 GS(ph)PHY(ph)FSPFRPY ddPTM_A459_MK2206_30min_R1 1 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 2 GS(1)PHY(0.516)FS(0.484)PFRPY 78.505 0.046367 0 810.94 819.79 690.1 629.48 722.1 822.78 838.23 828.37 610.43 549.33 TRUE FALSE 741.9652946 766.421522 643.2579347 677.9626587 693.3372279 869.3650926 782.3132061 821.1276484 673.8863829 617.3851476 1.201786757 1.241399352 1.041907045 1.098119482 1.123022202 1.408140601 1.26713966 1.33000875 1.091516998 1 9.270026966 GS(ph)PHY(ph)FSPFRPY ddPTM_A459_MK2206_30min_R2 2 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 2 GS(1)PHY(0.877)FS(0.123)PFRPY;GS(1)PHY(0.796)FS(0.204)PFRPY 115.12 0.014606 2929000 13345 17514.1 15086 15767.9 17965.7 13642.9 18330 11023.8 13162.5 13967.8 TRUE FALSE 14366.70346 16644.37526 15588.95971 14479.61213 17260.27635 14162.09012 15923.24898 12464.64851 14307.35046 13512.03183 1.063252636 1.231818832 1.153709517 1.071608794 1.27740051 1.048109588 1.178449635 0.922485135 1.058860032 1 13.72195701 -7.752196236 24.99989084 0.993004431 1.148296004 0.461069988 0.075559318 155.8681546 421578.5696 0.033884324 0.019217685 1.77E-08 7.752196236 0.155291573 GS(ph)PHYFS(ph)PFRPY ddPTM_A459_MK2206_30min_R1 3 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 2 GS(1)PHY(0.007)FS(0.993)PFRPY;GS(1)PHY(0.018)FS(0.982)PFRPY;GS(1)PHY(0.187)FS(0.813)PFRPY 103.6 0.0208 89351000 13802.2 13354.2 12135.9 10027.5 13087.7 12030.1 12846.3 12186.1 10805.7 10552.6 TRUE FALSE 12628.25041 12484.83915 11312.14892 10799.81979 12566.3892 12711.23387 11989.34677 12079.55821 11928.99118 11859.93576 1.064782362 1.052690285 0.95381199 0.910613684 1.05956638 1.071779319 1.010911611 1.018518014 1.00582258 1 13.53380857 -5.031532673 22.65586414 1.005698713 1.061759417 0.201455684 0.043857616 318.8752436 229111.0998 0.012382609 0.032876405 9.30E-06 5.031532673 0.056060704 GS(ph)PHYFS(ph)PFRPY ddPTM_A459_MK2206_30min_R2 2 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 2 GS(0.999)PHY(0.026)FS(0.975)PFRPY;GS(1)PHYFS(1)PFRPY 103.77 0.020505 3467600 12495.3 15972.6 14722 16188.3 16577.8 15287.8 22539 12618.5 13823.2 14456.8 TRUE FALSE 13451.94978 15179.42391 15212.82413 14865.66411 15926.87228 15869.58794 19579.60223 14267.78128 15025.51695 13985.0758 0.961878932 1.085401619 1.087789895 1.062966288 1.138847762 1.134751657 1.400035474 1.020214798 1.074396533 1 13.77160045 -3.450073441 0.719537012 1.135352468 1.79E-10 0.15429829 0.105036904 30.18055456 2.666059445 0.041992212 42.86115043 0.000354753 3.450073441 -1.135352468 GS(ph)PHYFSPFRPY ddPTM_A459_MK2206_30min_R1 3 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 GS(0.655)PHY(0.326)FS(0.02)PFRPY;GS(0.921)PHY(0.001)FS(0.077)PFRPY(0.001);GS(1)PHYFSPFRPY 110.31 0.012024 656464100 8657.14 6605.97 7276.57 6276.86 10147.75 9089.04 8909.05 7755.52 6013.03 5781.49 TRUE FALSE 7920.804783 6175.920152 6782.656702 6760.304845 9743.543629 9603.65359 8314.74353 7687.714306 6638.105986 6497.744629 1.219008323 0.950471357 1.043847841 1.0404079 1.499527018 1.477998004 1.27963532 1.183135802 1.02160155 1 12.66572333 -4.436949955 21.31985712 1.18187962 3.741156129 0.000898338 0.186957156 4732.046829 1218202.045 0.050137014 22020.54375 3.66E-05 4.436949955 2.559276508 GS(ph)PHYFSPFRPY ddPTM_A459_MK2206_30min_R2 5 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 GS(1)PHYFSPFRPY;GS(0.966)PHY(0.034)FSPFRPY;GS(1)PHYFSPFRPY;GS(1)PHYFSPFRPY;GS(0.999)PHY(0.001)FSPFRPY 104.81 0.0052732 1411769900 58109.59 93478.45 65501 100218.4 87706.7 96690.7 101061.4 68018.2 86489.6 78894.2 TRUE FALSE 62558.50489 88836.4461 67684.77065 92030.23614 84262.89427 100370.3323 87791.91678 76908.41228 94012.30907 76319.88872 0.819688104 1.164001253 0.886856254 1.205848668 1.104075172 1.315126817 1.150315052 1.007711274 1.231819263 1 16.21977145 -3.919465088 0.844516191 1.140723252 3.46E-11 0.317610772 0.123279222 10.70560808 2.029491286 0.041956502 16.04918297 0.000120375 3.919465088 -1.140723252 GS(ph)PLAEGPQAFFPER ddPTM_A459_MK2206_30min_R1 1 GSPLAEGPQAFFPER 15 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 GS(1)PLAEGPQAFFPER 149.31 0.00028779 3990100 617.89 429.77 397.94 421.83 504.4 358.43 422.99 239.03 309.83 382.02 TRUE FALSE 565.3352108 401.7918949 370.9289415 454.3194197 484.3086799 378.7239969 394.7731089 236.9401859 342.0379372 429.3475217 1.316731045 0.93581976 0.863936375 1.058162437 1.12801089 0.88209196 0.919472197 0.551861077 0.796645887 1 8.746002054 -7.199639832 2.070320767 0.764262394 1.039008321 0.331787164 0.158368618 0.363925371 3.052829362 0.07624729 0.05131706 6.31E-08 7.199639832 0.274745927 GS(ph)PLAEGPQAFFPER ddPTM_A459_MK2206_30min_R2 5 GSPLAEGPQAFFPER 15 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER 129.05 0.00091671 8897300 13241.5 16095.1 12410.3 17673.9 14917.4 11431.1 14698.1 9492.2 11603.6 9411.2 TRUE FALSE 14255.27942 15295.84074 12824.05321 16229.88583 14331.66792 11866.11852 12768.22181 10732.86313 12612.86015 9104.113315 1.565806458 1.680102192 1.408599911 1.782698136 1.574197006 1.303379924 1.402467365 1.17890263 1.385402369 1 13.1523028 -7.764632748 0.423685758 1.013663801 1.65489864 0.67483482 0.126655408 0.605674571 0.28551252 0.144254963 0.117486496 1.72E-08 7.764632748 0.64123484 GS(ph)PLLGPVVPGPSPIPSVTEK ddPTM_A459_MK2206_30min_R1 1 GSPLLGPVVPGPSPIPSVTEK 21 0 P49454 P49454 CENPF Centromere protein F 1 GS(1)PLLGPVVPGPSPIPSVTEK 199.41 4.38E-24 0 1381.3 1580 1284 896.25 1114.6 1071.8 1517.8 979.47 1333 1476.7 TRUE FALSE 1263.813182 1477.141713 1196.845657 965.2793303 1070.203122 1132.48439 1416.550331 970.9065971 1471.57012 1659.644745 0.761496209 0.890034881 0.721145692 0.581618044 0.644838677 0.682365544 0.853526236 0.58500869 0.886677782 1 10.69665874 -8.493985752 6.101428211 0.999816956 0.718230299 0.491303175 0.096363186 0.135866789 16.92260581 0.097489177 0.025264221 3.21E-09 8.493985752 -0.281586657 GS(ph)PLNAAPYGIESMSQDTEVR ddPTM_A459_MK2206_30min_R2 1 GSPLNAAPYGIESMSQDTEVR 21 0 B4DSN5;P18031 B4DSN5 PTPN1 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 1 1 GS(0.992)PLNAAPY(0.002)GIES(0.003)MS(0.002)QDTEVR 92.792 0.0027769 0 8703.3 4939.3 5913.8 4611.6 4657.3 5795.9 5500.6 3707.6 4353.6 5237 TRUE FALSE 9369.63134 4694.021544 6110.96314 4234.817528 4474.431001 6016.467036 4778.364613 4192.19605 4732.268258 5066.117119 1.849469943 0.926552118 1.206241979 0.835909915 0.883207177 1.187589409 0.943200582 0.827496868 0.93410163 1 12.30666471 -4.759621813 24.99999431 0.972391985 1.849471042 0.818548966 0.123997377 19.33774336 265909.3771 0.031341215 0.196434508 1.74E-05 4.759621813 0.877079056 GS(ph)PLPVLSWANR ddPTM_A459_MK2206_30min_R1 1 GSPLPVLSWANR 12 0 I3L413;C9J2U0;P24864-2;P24864-3;P24864;I3L1Q9 I3L413 CCNE1 G1/S-specific cyclin-E1 1 GS(1)PLPVLSWANR 130.69 0.0021322 7884800 762.03 924.37 871.23 623.24 593.1 786.37 875.22 556.15 715.65 945.12 TRUE FALSE 697.2153469 864.193345 812.093335 671.2420528 569.4755711 830.8935898 816.8356707 551.2876392 790.0443785 1062.208601 0.656382698 0.813581574 0.764532818 0.631930538 0.536124044 0.78223203 0.768997417 0.519001295 0.743775166 1 10.0528514 -8.550909462 23.29297657 1.000000003 0.686828818 0.490145152 0.096320516 3510.748525 2917358.58 0.096288076 0.024861474 2.81E-09 8.550909462 -0.313171184 GS(ph)PMMNR ddPTM_A459_MK2206_30min_R2 2 GSPMMNR 7 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 GS(1)PMMNR;GS(1)PMMNR 101.46 0.019909 7197900 31620 42672 33536 45811 37819 47195 46092 35959 42854 38219 TRUE FALSE 34040.85151 40552.97053 34654.0735 42068.09476 36334.03603 48991.0388 40040.06503 40658.96477 46581.36346 36971.91716 0.920721838 1.096858742 0.937307994 1.137839149 0.982746875 1.325087866 1.082985901 1.099725627 1.259912037 1 15.17414224 -6.167769421 1.453520948 1.147624713 0.998765254 0.236062113 0.109818022 0.579784109 2.457322297 0.038328815 0.057650245 6.80E-07 6.167769421 -0.14885946 GS(ph)PNTASAEATLPR ddPTM_A459_MK2206_30min_R1 4 GSPNTASAEATLPR 14 0 Q6PJG6-3;Q6PJG6 Q6PJG6-3 BRAT1 BRCA1-associated ATM activator 1 1 GS(0.999)PNTASAEATLPR;GS(1)PNTASAEATLPR;GS(0.999)PNTASAEAT(0.001)LPR;GS(0.998)PNT(0.001)ASAEAT(0.001)LPR 151.73 0.00039617 64109900 3719.85 3902.9 3906.46 3505.97 4377.49 3604.56 4166.31 4027.97 3489.14 3273.94 TRUE FALSE 3403.457224 3648.820501 3641.300379 3776.000417 4203.125304 3808.647072 3888.383062 3992.753883 3851.848589 3679.540404 0.924968026 0.991651157 0.989607391 1.026215234 1.142296277 1.035087716 1.056757811 1.085122989 1.046828725 1 11.84530986 -5.717878408 2.14437045 1.064593457 0.961023254 0.540593688 0.03817503 0.228345958 2.136221137 0.011166358 0.022382215 1.91E-06 5.717878408 -0.103570203 GS(ph)PNTASAEATLPR ddPTM_A459_MK2206_30min_R2 4 GSPNTASAEATLPR 14 0 Q6PJG6-3;Q6PJG6 Q6PJG6-3 BRAT1 BRCA1-associated ATM activator 1 1 GS(1)PNTASAEATLPR;GS(0.996)PNT(0.001)ASAEAT(0.003)LPR;GS(1)PNTASAEATLPR;GS(1)PNTASAEATLPR 195.5 1.99E-06 46423000 68281 67452 57827.3 63239 69190 64493 67978 47066.2 63064 64626.5 TRUE FALSE 73508.64586 64102.43176 59755.23332 58072.17141 66473.25295 66947.32631 59052.40694 53217.91394 68549.19273 62517.7426 1.175804545 1.025347831 0.955812396 0.928891047 1.063270204 1.070853225 0.944570365 0.85124497 1.096475814 1 15.93197807 -7.275727715 24.39820719 0.960676532 1.028784511 0.107854726 0.084918686 1342.119898 2291739.675 0.036295319 0.024603681 5.30E-08 7.275727715 0.06810798 GS(ph)PPEDYR ddPTM_A459_MK2206_30min_R2 2 GSPPEDYR 8 0 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 GS(1)PPEDYR;GS(0.999)PPEDY(0.001)R 87.323 0.032633 17998600 110566 112348 99636 114250 109490 103126 114926 99045 100855 112684 TRUE FALSE 119031.018 106768.9617 102957.8145 104915.4095 105190.8725 107050.5322 99836.07815 111990.5216 109627.1856 109007.1303 1.091956257 0.979467686 0.94450532 0.962463733 0.96499075 0.982050733 0.91586741 1.027368772 1.005688209 1 16.73406298 -10.54155843 8.856121757 1.00000017 0.982346717 0.00248368 0.045980942 6.33E-11 0 0.044769808 0.010858273 2.87E-11 10.54155843 -0.017653453 GS(ph)PPTSSNIVQGQIK ddPTM_A459_MK2206_30min_R2 2 GSPPTSSNIVQGQIK 15 0 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 GS(1)PPTSSNIVQGQIK;GS(1)PPTSSNIVQGQIK 197.75 2.73E-05 17862400 35633 33149 31908 43455 35678 32741 41963 28596 34018 35750 TRUE FALSE 38361.08988 31502.86886 32971.79679 39904.58749 34277.10245 33986.9817 36453.20769 32333.59538 36976.82415 34583.48043 1.109231616 0.910922454 0.953397298 1.153862682 0.991140916 0.982751917 1.054064173 0.93494336 1.069204825 1 15.07779545 -6.816841777 0.004388192 0.713381774 1.312073718 0.002036853 0.07441426 261787.054 468.6030522 31600.19791 32326.63679 1.52E-07 6.816841777 0.598691944 GS(ph)PPVPSGPPMEEDGLR ddPTM_A459_MK2206_30min_R1 2 GSPPVPSGPPMEEDGLR 17 0 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 GS(1)PPVPSGPPMEEDGLR;GS(1)PPVPSGPPMEEDGLR 127.2 0.0011106 26109000 2842.3 2794.8 2689.6 2050.81 2925.3 3115.1 3522.2 2619.7 3354.9 3825.3 TRUE FALSE 2600.547459 2612.858012 2507.037446 2208.763742 2808.779107 3291.47427 3287.240465 2596.796239 3703.653861 4299.207044 0.604890026 0.607753473 0.5831395 0.513760728 0.653324922 0.765600316 0.764615528 0.604017488 0.861473714 1 12.06985487 -8.703646569 0.293764204 1.066174714 0.546126732 0.752304296 0.070677063 1.339408442 0.31106188 0.235543092 0.114804552 1.98E-09 8.703646569 -0.520047983 GS(ph)PQAISR ddPTM_A459_MK2206_30min_R2 2 GSPQAISR 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 GS(1)PQAISR;GS(1)PQAISR 123.62 0.0058231 57986000 151523 118354 78170 125711 90336 93597 150556 114035 82772 120280 TRUE FALSE 163123.7174 112476.7125 80776.14878 115440.0092 86788.95474 97158.89942 130787.8163 128939.766 89971.35894 116355.2735 1.401945202 0.966666221 0.694219921 0.992133882 0.745896186 0.835019304 1.12403858 1.108155756 0.773246938 1 16.82817707 -4.771873282 4.69757899 0.910190662 1.434392937 0.521222242 0.140730156 0.149721078 7.780029923 0.036447137 0.258568572 1.69E-05 4.771873282 0.524202275 GS(ph)PQQIDHAK ddPTM_A459_MK2206_30min_R2 2 GSPQQIDHAK 10 0 A0A087WTP3;Q92945;M0R3J3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 1 GS(1)PQQIDHAK;GS(1)PQQIDHAK 109.6 0.0065955 26211000 275230 402320 334030 474830 395940 446470 377290 309820 403310 337900 TRUE FALSE 296301.8204 382341.3738 345166.3935 436034.8701 380393.4062 463460.7287 327751.3698 350314.5378 438389.1748 326874.3507 0.906470085 1.169689127 1.055960472 1.333952539 1.163729749 1.417855906 1.002683047 1.071710084 1.341155015 1 18.31837665 -4.163679076 1.443076966 1.185796604 6.07E-17 0.238304243 0.141010392 8.896158438 4.763161454 0.038890427 23.63143492 6.86E-05 4.163679076 -1.185796604 GS(ph)PQSAAAELSSGLLASAAASSR ddPTM_A459_MK2206_30min_R2 2 GSPQSAAAELSSGLLASAAASSR 23 0 Q12948 Q12948 FOXC1 Forkhead box protein C1 1 GS(1)PQSAAAELSSGLLASAAASSR;GS(0.999)PQS(0.001)AAAELSSGLLASAAASSR 172.77 9.50E-16 3635300 12095.4 10949.3 12034.6 8990 12386 11159.1 15925.8 9225 12455.9 13729.3 TRUE FALSE 13021.43312 10405.57368 12435.82756 8255.488242 11899.66341 11583.76737 13834.72333 10430.73917 13539.29167 13281.31407 0.980432588 0.78347471 0.936340146 0.621586705 0.895970334 0.872185336 1.041668261 0.785369514 1.019424102 1 13.69711027 -6.854112404 2.737087079 0.943741614 0.830923218 0.183797925 0.113106933 0.485553611 7.378573102 0.041924846 0.03684472 1.40E-07 6.854112404 -0.112818396 GS(ph)PSGGSTAEASDTLSIR ddPTM_A459_MK2206_30min_R1 4 GSPSGGSTAEASDTLSIR 18 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 GS(0.962)PS(0.038)GGSTAEASDTLSIR;GS(0.996)PS(0.004)GGSTAEASDTLSIR;GS(0.997)PS(0.003)GGSTAEASDTLSIR;GS(0.999)PS(0.001)GGSTAEASDTLSIR 330.65 3.27E-144 34900300 3428.57 3567.04 3203.45 2593.05 4243.28 4125.31 4391.05 3212.41 3584.3 3121.22 TRUE FALSE 3136.952117 3334.825048 2986.008739 2792.76716 4074.261172 4358.881487 4098.131066 3184.324238 3956.900812 3507.900298 0.8942535 0.950661297 0.851223948 0.796136413 1.161452957 1.242589902 1.168257567 0.907757909 1.127996943 1 11.77639203 -6.265474134 24.99941 1.107138565 0.877050763 0.582007399 0.094671886 271.0194036 1679238.756 0.031251002 0.036740978 5.43E-07 6.265474134 -0.230087802 GS(ph)PSGGSTAEASDTLSIR ddPTM_A459_MK2206_30min_R2 4 GSPSGGSTAEASDTLSIR 18 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 GS(0.979)PS(0.021)GGSTAEASDTLSIR;GS(0.984)PS(0.016)GGSTAEASDTLSIR;GS(0.986)PS(0.014)GGSTAEASDTLSIR;GS(0.983)PS(0.017)GGSTAEASDTLSIR 192.23 2.40E-10 45994800 47612 44729.2 44546 51655.1 40311.1 40533.6 49977.1 39512.1 45392.5 48598.6 TRUE FALSE 51257.21133 42508.01297 46031.14141 47434.71309 38728.28367 42076.13455 43415.04674 44676.46714 49340.6576 47012.83166 1.090281302 0.904178954 0.979118674 1.008973751 0.823781132 0.89499256 0.923472278 0.950303684 1.049514693 1 15.52076696 -10.81016809 8.217000107 1.000000067 0.95172565 0.0208033 0.07445636 9.21E-08 8.02E-09 0.072468892 0.017576264 1.55E-11 10.81016809 -0.048274417 GS(ph)PSPAAPGPPAGPLPR ddPTM_A459_MK2206_30min_R2 1 GSPSPAAPGPPAGPLPR 17 0 Q6F5E8-2;Q6F5E8 Q6F5E8-2 RLTPR Leucine-rich repeat-containing protein 16C 1 GS(0.999)PS(0.001)PAAPGPPAGPLPR 176.4 9.38E-08 7076400 8650.1 10174 8206.9 11418 10034 9465.7 12999 11157 9547.9 9748.6 TRUE FALSE 9312.358307 9668.773954 8480.51395 10485.11288 9640.014743 9825.923846 11292.21569 12615.25821 10378.35908 9430.50398 0.987471966 1.025265879 0.899264129 1.111829537 1.022216285 1.041929876 1.197413808 1.337707744 1.100509485 1 13.20311916 -7.191534535 4.265934619 1.187295768 1.0120086 0.346855752 0.094407829 0.214587522 7.610971791 0.036833223 0.027658089 6.43E-08 7.191534535 -0.175287168 GS(ph)PSPASVSSGR ddPTM_A459_MK2206_30min_R1 2 GSPSPASVSSGR 12 0 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 1 GS(0.979)PS(0.021)PASVSSGR;GS(0.998)PS(0.002)PASVSSGR 142.12 0.00093539 39301000 6463.8 5557.9 5731.8 4512.8 6184 6699.7 8518.5 5008.9 4856.6 5889.8 TRUE FALSE 5914.019867 5196.0797 5342.741386 4860.376638 5937.678185 7079.031224 7950.246408 4965.107715 5361.46095 6619.47289 0.893427614 0.784968801 0.807124899 0.734254331 0.897001662 1.069425216 1.201039198 0.750075995 0.809952853 1 12.69250062 -6.517941849 23.66933904 0.967167897 0.805167265 0.276112949 0.123006544 158.5571674 760191.8258 0.043512728 0.04475876 3.03E-07 6.517941849 -0.162000632 GS(ph)PSPASVSSGR ddPTM_A459_MK2206_30min_R2 1 GSPSPASVSSGR 12 0 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 1 GS(0.975)PS(0.025)PASVSSGR 108.68 0.0079563 48667000 33620 26485 25723 43517 37873 44500 39224 37107 47286 32530 TRUE FALSE 36193.97305 25169.79341 26580.59198 39961.5219 36385.91572 46193.47868 34073.84168 41957.01231 51398.85081 31468.54876 1.1501634 0.799839662 0.844671681 1.269887665 1.156262909 1.467925294 1.082790374 1.333299881 1.633340361 1 14.94162303 -5.77043591 24.13688691 1.28628335 0.918386393 0.404081366 0.192198437 111.3817174 298828.1814 0.052787627 0.079675809 1.70E-06 5.77043591 -0.367896956 GS(ph)PSSHLLGADHGLR ddPTM_A459_MK2206_30min_R1 3 GSPSSHLLGADHGLR 15 0 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 GS(0.99)PS(0.01)S(0.001)HLLGADHGLR;GS(0.989)PS(0.009)S(0.003)HLLGADHGLR;GS(0.855)PS(0.09)S(0.055)HLLGADHGLR 184 2.10E-05 24173700 4931.3 3475.68 3845.7 2918.11 6400.6 4960.17 5816 4643.83 3584.6 3743.75 TRUE FALSE 4511.86704 3249.4126 3584.664599 3142.863338 6145.650549 5241.010539 5428.025252 4603.229484 3957.231998 4207.554014 1.0723254 0.772280662 0.851959259 0.746957336 1.460623091 1.245619313 1.290066683 1.094039309 0.940506523 1 12.03876608 -6.242146625 24.99347286 1.186114522 0.853914838 0.471043998 0.160920073 718.8740079 931290.2979 0.048691061 0.062760423 5.73E-07 6.242146625 -0.332199684 GS(ph)PSSHLLGADHGLR ddPTM_A459_MK2206_30min_R2 4 GSPSSHLLGADHGLR 15 0 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 GS(0.907)PS(0.046)S(0.046)HLLGADHGLR;GS(0.977)PS(0.017)S(0.007)HLLGADHGLR;GS(0.823)PS(0.17)S(0.008)HLLGADHGLR;GS(0.945)PS(0.041)S(0.014)HLLGADHGLR 118.52 0.001333 133845000 189582 269625 197591 301626 299319 335528 325355 219739 280084 248647 TRUE FALSE 204096.5437 256235.8146 204178.5853 276982.1909 287566.2321 348296.7532 282635.4977 248459.6418 304445.2 240533.6688 0.84851549 1.065280449 0.848856571 1.151531893 1.19553422 1.448016633 1.175035076 1.032951616 1.265707215 1 17.87587932 -5.86950047 5.594002388 1.197827631 0.936575987 0.458868178 0.129080634 0.188694678 8.581997381 0.037006052 0.055832837 1.35E-06 5.86950047 -0.261251644 GS(ph)PTGGAQLLK ddPTM_A459_MK2206_30min_R1 4 GSPTGGAQLLK 11 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 GS(0.992)PT(0.008)GGAQLLK;GS(0.995)PT(0.005)GGAQLLK;GS(1)PTGGAQLLK;GS(0.96)PT(0.04)GGAQLLK 158.25 0.00057087 148733000 12911.6 12898.1 12519.7 10731.6 11970.2 11983.3 14291.2 11883.8 12798.5 12358.6 TRUE FALSE 11813.40062 12058.43135 11669.89765 11558.14969 11493.40159 12661.78409 13337.86012 11779.90119 14128.94987 13889.67667 0.850516603 0.868157815 0.840184975 0.832139579 0.827477979 0.911596748 0.960271462 0.848104781 1.017226694 1 13.7617254 -7.788470404 0.640825456 1.003555488 0.842421872 0.642688866 0.04094109 0.479997888 0.40322054 0.038952007 0.020518018 1.63E-08 7.788470404 -0.161133616 GS(ph)PTGGAQLLK ddPTM_A459_MK2206_30min_R2 4 GSPTGGAQLLK 11 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 GS(1)PTGGAQLLK;GS(0.999)PT(0.001)GGAQLLK;GS(0.993)PT(0.007)GGAQLLK;GS(0.992)PT(0.008)GGAQLLK 136.27 0.0014288 294507000 226703 239389 215654 237102 237638 206485 265406 177291 178534 229155 TRUE FALSE 244059.556 227501.2904 222843.7967 217730.0081 228307.1381 214342.9314 230557.8734 200463.5424 194062.5646 221677.6911 1.100965797 1.02627057 1.005260365 0.98219179 1.029905792 0.966912504 1.04005898 0.904301833 0.875426677 1 17.75810406 -7.764583279 24.99967647 0.917398167 1.017893789 0.477388288 0.045162186 66.99034377 532674.7081 0.02302639 0.011796187 1.72E-08 7.764583279 0.100495622 GS(ph)PTGGAQLLKR ddPTM_A459_MK2206_30min_R2 2 GSPTGGAQLLKR 12 1 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 GS(0.806)PT(0.194)GGAQLLKR;GS(0.861)PT(0.139)GGAQLLKR 84.687 0.016576 25243000 61006 140785 124829 160099 218310 198294 187027 128214 218766 125079 TRUE FALSE 65676.66627 133793.8216 128990.7366 147018.3996 209738.0525 205840.2171 162470.1302 144972.01 237793.8712 120997.6825 0.542792762 1.105755242 1.066059563 1.215051368 1.733405535 1.701191402 1.342754067 1.198138733 1.965276246 1 16.88461989 -4.731162792 0.80975072 1.49035687 0.023894626 0.495809937 0.280897201 2.290178615 1.089862826 0.105680316 3.092737323 1.86E-05 4.731162792 -1.466462244 GS(ph)PTSAYPER ddPTM_A459_MK2206_30min_R1 1 GSPTSAYPER 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 GS(0.99)PT(0.009)S(0.001)AYPER 124.39 0.0038579 143970000 2095.1 1719.2 2106.6 1646.8 2055.6 2222 2171.7 1820.5 1850.7 1844 TRUE FALSE 1916.900743 1607.279768 1963.609861 1773.636821 1973.721099 2347.80772 2026.829855 1804.58356 2043.086888 2072.448641 0.924944872 0.775546248 0.947483002 0.85581702 0.952361887 1.132866539 0.977987978 0.870749472 0.985832337 1 11.01712063 -6.403300802 4.963868226 0.989928255 0.874713587 0.36417852 0.072928381 0.27152487 9.909172097 0.024067803 0.027261696 3.95E-07 6.403300802 -0.115214669 GS(ph)PTSAYPER ddPTM_A459_MK2206_30min_R2 2 GSPTSAYPER 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 GS(0.963)PT(0.027)S(0.009)AYPER;GS(0.971)PT(0.022)S(0.007)AYPER 104.07 0.013546 353310000 25783 31209 30566 31243 29849 34912 34802 25100.6 29004 34137 TRUE FALSE 27756.9663 29659.20644 31585.05518 28690.34696 28676.97828 36240.60062 30232.4556 28381.3346 31526.71549 33023.11249 0.840531501 0.898134797 0.956453005 0.868795967 0.868391139 1.097431402 0.915493826 0.85943851 0.954686373 1 15.01118848 GS(ph)PTSAYPERR ddPTM_A459_MK2206_30min_R2 1 GSPTSAYPERR 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 GS(0.991)PT(0.007)S(0.002)AYPERR 85.536 0.017832 2214700 7695.6 9484.1 7178.5 8834.6 8864.1 13795 9606.5 7932.9 10533 6935.8 TRUE FALSE 8284.781053 9013.133385 7417.827607 8112.78492 8516.050895 14319.97839 8345.155011 8969.757268 11449.1413 6709.485414 1.234786357 1.343341975 1.105573252 1.209151584 1.269255445 2.134288624 1.243784656 1.33687708 1.706411236 1 12.71198641 -6.55271452 24.99988885 1.513793838 1.225366809 0.159919008 0.286168507 342.8662818 287291.017 0.091799126 0.091800167 2.80E-07 6.55271452 -0.288427029 GS(ph)PTTGFIEQK ddPTM_A459_MK2206_30min_R2 2 GSPTTGFIEQK 11 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 GS(0.866)PT(0.117)T(0.017)GFIEQK;GS(0.982)PT(0.016)T(0.003)GFIEQK 135.02 0.0015323 10575800 43943 42445 39484 42897 38109 35804 52278 34959 30526 44876 TRUE FALSE 47307.30987 40337.24302 40800.37685 39392.17788 36612.64918 37166.54631 45413.8358 39528.26133 33181.0963 43411.6998 1.08973641 0.929179074 0.939847485 0.907409248 0.843382069 0.856141236 1.046119733 0.910543967 0.76433534 1 15.40579629 -3.266487353 1.240286469 0.903846205 7.854190605 0.341060781 0.074958882 66.75297964 3.522055028 0.02224259 1224.049971 0.000541393 3.266487353 6.950344399 GS(ph)PVFLPR ddPTM_A459_MK2206_30min_R1 4 GSPVFLPR 8 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 GS(1)PVFLPR;GS(1)PVFLPR;GS(1)PVFLPR;GS(1)PVFLPR 128.6 0.0042872 104631000 12785.5 12411.9 13182.8 8957.7 10887.6 11126.3 13276.8 9842.1 13104.7 12856.2 TRUE FALSE 11698.02609 11603.88305 12287.98827 9647.623606 10453.92384 11756.26149 12391.1289 9756.051557 14466.98046 14448.92312 0.809612315 0.80309674 0.85044319 0.667705374 0.723508856 0.813642747 0.857581482 0.675209597 1.001249736 1 13.81867435 -8.278609006 24.7878065 1.000624968 0.777279312 0.669507893 0.063365903 504.536735 728392.3265 0.061557934 0.01606354 5.26E-09 8.278609006 -0.223345657 GS(ph)PVFLPR ddPTM_A459_MK2206_30min_R2 5 GSPVFLPR 8 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 GS(1)PVFLPR;GS(1)PVFLPR;GS(1)PVFLPR;GS(1)PVFLPR;GS(1)PVFLPR 138.06 0.0024917 124402200 231441 236369 219581 282952 196717 225747 276035 195544 168753 265433 TRUE FALSE 249160.3009 224631.2592 226901.7209 259833.9165 188992.9022 234337.9603 239791.2729 221102.2722 183430.8309 256771.9429 0.970356411 0.874827898 0.883670226 1.011924876 0.736034085 0.912630709 0.93386867 0.861084236 0.714372563 1 17.97012804 -6.239304224 24.97574253 0.859077693 0.927202578 0.146791723 0.088364218 1803.43177 2034864.977 0.025744978 0.033206002 5.76E-07 6.239304224 0.068124885 GS(ph)PVPPVPER ddPTM_A459_MK2206_30min_R2 1 GSPVPPVPER 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 GS(1)PVPPVPER 87.184 0.03401 8337500 50473 58745 66013 66714 53386 65735 70104 55018 50760 63405 TRUE FALSE 54337.25169 55827.80872 68213.84047 61263.25279 51289.7974 68236.59149 60899.26059 62209.04151 55175.01305 61336.10004 0.885893489 0.910194953 1.112132014 0.998812327 0.836208976 1.112502938 0.992877939 1.014232099 0.899552026 1 15.90444882 -6.772200713 24.99993225 1.004037762 0.958381347 0.091716683 0.084085194 711.7514752 1653477.887 0.030625785 0.027272242 1.69E-07 6.772200713 -0.045656414 GS(ph)PVTTREPTPR ddPTM_A459_MK2206_30min_R1 1 GSPVTTREPTPR 12 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 GS(0.998)PVT(0.002)TREPTPR 130.19 0.010458 7725600 2602.6 2022.3 1874.9 2313.2 3055.6 1977.7 2433.3 2234.7 1222.5 1180.3 TRUE FALSE 2381.235203 1890.647902 1747.637012 2491.363065 2933.888982 2089.675665 2270.978997 2215.162254 1349.58325 1326.524475 1.795093305 1.425264244 1.317455535 1.878113154 2.211711158 1.575301251 1.711976703 1.669899271 1.017382849 1 10.37343558 -8.259402218 5.525014369 0.997061611 1.697584466 0.584922855 0.232437279 0.121328085 14.15577698 0.207467266 0.064681889 5.50E-09 8.259402218 0.700522855 GS(ph)SGCSEAGGAGHEEGR ddPTM_A459_MK2206_30min_R2 1 GSSGCSEAGGAGHEEGR 17 0 Q9C0C9 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 GS(0.499)S(0.499)GCS(0.001)EAGGAGHEEGR 137.99 0.00033741 1608700 5914.8 3539.3 2379.6 5253.2 2909.3 3207 3094.3 3362.7 3892.7 4839.7 TRUE FALSE 6367.641636 3363.543509 2458.934676 4823.996756 2795.066264 3329.044632 2688.014693 3802.216436 4231.28001 4681.780985 1.360089602 0.718432477 0.525213521 1.030376425 0.597009188 0.711063726 0.574143622 0.812130351 0.903775726 1 12.19284173 -4.759887104 24.96856828 0.74582409 1.360090369 0.533844758 0.166483742 28.98648568 466097.4467 0.039797176 0.244744574 1.74E-05 4.759887104 0.614266278 GS(ph)SGSPAHAESYSSGGGGQQK ddPTM_A459_MK2206_30min_R1 1 GSSGSPAHAESYSSGGGGQQK 21 0 P15408 P15408 FOSL2 Fos-related antigen 2 1 GS(0.394)S(0.303)GS(0.303)PAHAESYSSGGGGQQK 107.83 8.52E-05 15903000 2561.8 1557.4 1826 1309.5 3217 2663.9 3061.7 2513.5 1619.4 1985.1 TRUE FALSE 2343.905457 1456.012977 1702.056208 1410.357917 3088.860078 2814.727716 2857.459579 2491.524734 1787.742425 2231.029175 1.050593817 0.652619425 0.762901815 0.632155748 1.384500083 1.26162748 1.280780911 1.116760266 0.801308403 1 11.12349366 -6.253182228 24.95860271 1.159705007 0.765023827 0.482065449 0.1852625 517.4418514 1564052.392 0.056447893 0.071626394 5.58E-07 6.253182228 -0.39468118 GS(ph)SGSPAHAESYSSGGGGQQK ddPTM_A459_MK2206_30min_R2 1 GSSGSPAHAESYSSGGGGQQK 21 0 P15408 P15408 FOSL2 Fos-related antigen 2 1 GS(0.333)S(0.333)GS(0.333)PAHAESYSSGGGGQQK 149.64 1.37E-06 41787000 16451 29777 20647 32953 29809 32986 32200 22840 26930 24567 TRUE FALSE 17710.50121 28298.31748 21335.36067 30260.63449 28638.54888 34241.30534 27972.10132 25825.26642 29272.32272 23765.3808 0.745222698 1.190736968 0.897749582 1.273307368 1.205053229 1.440806088 1.17701044 1.086675894 1.231721173 1 14.5365739 -4.200982955 0.952096493 1.200976827 1.95E-10 0.41004219 0.145637077 5.426403288 1.800697417 0.047598457 8.754387642 6.30E-05 4.200982955 -1.200976826 GS(ph)SPGPRPVEGTPASR ddPTM_A459_MK2206_30min_R1 1 GSSPGPRPVEGTPASR 16 1 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 GS(0.5)S(0.5)PGPRPVEGTPASR 119.47 0.0079766 6662700 1615 1990.4 1830.4 1364 2026.6 1517 1818.3 1396 1278.5 1157.1 TRUE FALSE 1477.635769 1860.824598 1706.157548 1469.055516 1945.876231 1602.891229 1697.004525 1383.794919 1411.40465 1300.450284 1.136249334 1.430907911 1.311974452 1.129651425 1.49630959 1.232566327 1.304936103 1.064089059 1.08531996 1 10.34479553 -7.768429549 8.834306672 1.055430863 1.297382598 0.505496413 0.109546874 0.106178539 74.56093175 0.054474488 0.027996987 1.70E-08 7.768429549 0.241951735 GS(ph)SPLGPAGLGAEEPAAGPQLPSWLQPER ddPTM_A459_MK2206_30min_R1 2 GSSPLGPAGLGAEEPAAGPQLPSWLQPER 29 0 O43482;H0YKL4 O43482 OIP5 Protein Mis18-beta;Protein yippee-like 1 GS(0.5)S(0.5)PLGPAGLGAEEPAAGPQLPSWLQPER;GS(0.5)S(0.5)PLGPAGLGAEEPAAGPQLPSWLQPER 249.13 2.50E-64 6464300 1415.2 1650.96 1466.01 1298.26 1276.52 1385.71 1485.01 1389.68 1293.81 1198.31 TRUE FALSE 1294.829808 1543.482204 1366.501326 1398.25221 1225.673505 1464.167703 1385.947692 1377.530174 1428.306179 1346.76569 0.961436587 1.146065879 1.014654098 1.038229754 0.910086673 1.087173303 1.029093407 1.022843235 1.060545417 1 10.39528316 -7.326145102 0.002717656 5.44E-05 2.055308394 0.00377171 0.061462395 169192.2099 288.7837196 108763.6041 109620.5059 4.72E-08 7.326145102 2.055254027 GS(ph)SPLGPAGLGAEEPAAGPQLPSWLQPER ddPTM_A459_MK2206_30min_R2 2 GSSPLGPAGLGAEEPAAGPQLPSWLQPER 29 0 O43482;H0YKL4 O43482 OIP5 Protein Mis18-beta;Protein yippee-like 1 GS(0.5)S(0.5)PLGPAGLGAEEPAAGPQLPSWLQPER;GS(0.5)S(0.5)PLGPAGLGAEEPAAGPQLPSWLQPER 104.93 1.21E-10 8033700 12118.4 16083.1 13102.4 18985.6 17336.3 15927.9 16784.6 14534.2 14756.1 18199.1 TRUE FALSE 13046.19402 15284.43664 13539.22748 17434.41575 16655.58975 16534.0474 14580.76186 16433.86984 16039.55891 17605.26486 0.74103935 0.868174195 0.769044237 0.990295567 0.946057324 0.939153573 0.828204629 0.933463369 0.911066038 1 14.10371931 -5.753111802 24.99993469 0.928816685 0.800294733 0.594827494 0.053670952 139.6575116 419256.6172 0.014586511 0.024735423 1.77E-06 5.753111802 -0.128521953 GS(ph)SPLPTATTPKPLIPTEASIR ddPTM_A459_MK2206_30min_R1 1 GSSPLPTATTPKPLIPTEASIR 22 1 Q9BUK6-2;Q9BUK6;A0A3B3IUD2;Q9BUK6-7;Q9BUK6-3 Q9BUK6-2 MSTO1 Protein misato homolog 1 1 GS(0.522)S(0.475)PLPT(0.002)ATTPKPLIPTEASIR 60.104 0.0086829 14083000 1336.8 1393.7 1116.8 1101.4 1311 1127.3 1279.9 1217.5 978.11 1004.5 TRUE FALSE 1223.09814 1302.969877 1040.994728 1186.230019 1258.780094 1191.126752 1194.520206 1206.855526 1079.788035 1128.945044 1.083399185 1.154148188 0.922095131 1.050742041 1.115005643 1.055079482 1.058085345 1.069011758 0.956457571 1 10.14075954 -7.723803831 0.010189758 5.05E-08 2.078152549 0.137515259 0.061688143 2240.143979 21.36866673 2166.090484 2188.344275 1.89E-08 7.723803831 2.078152498 GS(ph)SPLPTATTPKPLIPTEASIR ddPTM_A459_MK2206_30min_R2 1 GSSPLPTATTPKPLIPTEASIR 22 1 Q9BUK6-2;Q9BUK6;A0A3B3IUD2;Q9BUK6-7;Q9BUK6-3 Q9BUK6-2 MSTO1 Protein misato homolog 1 1 GS(0.536)S(0.464)PLPTATTPKPLIPTEASIR 110.31 2.67E-05 11421000 31843 34487 39006 40849 38033 34839 35662 24857 33714 33688 TRUE FALSE 34280.92456 32774.42573 40306.44057 37511.50603 36539.63332 36164.82256 30979.53656 28105.89525 36646.38278 32588.76332 1.051924684 1.00569713 1.236820194 1.151056444 1.121234119 1.109732892 0.950620196 0.862441295 1.124509771 1 14.99208699 -7.253560831 22.08964548 0.972929585 1.115645687 0.362337013 0.08280529 126.4037161 354408.6242 0.032778897 0.024824684 5.58E-08 7.253560831 0.142716102 GS(ph)SPQNTTTPK ddPTM_A459_MK2206_30min_R2 1 GSSPQNTTTPK 11 0 Q27J81-2;Q27J81 Q27J81-2 INF2 Inverted formin-2 1 GS(0.607)S(0.392)PQNT(0.001)TTPK 125.84 0.003273 4429000 29990 22645 25172 27329 17984 18438 33302 20870 16503 30506 TRUE FALSE 32286.05746 21520.48223 26011.22192 25096.13328 17277.8578 19139.67101 28929.4074 23597.78066 17938.40111 29510.59172 1.094049817 0.729246043 0.88141987 0.85041105 0.585479883 0.648569544 0.980305908 0.799637665 0.607863146 1 14.84894523 -4.755613027 24.92139608 0.78108197 1.094050343 0.306434974 0.138327611 230.8571879 987355.5935 0.03443288 0.299967033 1.76E-05 4.755613027 0.312968374 GS(ph)SPQNTTTPKPSVEGQQPAAAAACEPVDHAQSESILK ddPTM_A459_MK2206_30min_R2 2 GSSPQNTTTPKPSVEGQQPAAAAACEPVDHAQSESILK 38 1 Q27J81-2;Q27J81 Q27J81-2 INF2 Inverted formin-2 1 GS(0.384)S(0.358)PQNT(0.069)T(0.069)T(0.06)PKPS(0.06)VEGQQPAAAAACEPVDHAQSESILK;GS(0.435)S(0.394)PQNT(0.083)T(0.083)T(0.004)PKPS(0.001)VEGQQPAAAAACEPVDHAQSESILK 86.366 8.10E-10 106482000 168054 194594 200704 204630 239884 189310 239402 156809 197508 233182 TRUE FALSE 180920.3435 184930.7449 207395.3712 187911.0744 230464.9488 196514.3247 207968.2298 177304.4747 214686.8888 225573.2904 0.802046834 0.819825541 0.919414576 0.833037786 1.02168545 0.871177276 0.921954144 0.786017149 0.95173896 1 17.78323673 -1.522879618 0.021641224 1.570627929 5.84E-10 0.278631972 0.066951179 4107.198584 6.87092101 180.4970199 341.8321451 0.02999994 1.522879618 -1.570627929 GS(ph)SPTPPCSPVQPSK ddPTM_A459_MK2206_30min_R2 1 GSSPTPPCSPVQPSK 15 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 GS(0.912)S(0.088)PT(0.001)PPCSPVQPSK 188.09 2.45E-05 54964000 67515 85256 84252 104960 106330 113600 118670 84047 109220 107620 TRUE FALSE 72684.00031 81022.31101 87060.91963 96384.43225 102154.9499 117923.1276 103088.4865 95032.23148 118719.7582 104108.3682 0.698157137 0.778249745 0.83625285 0.925808692 0.981236683 1.132695955 0.990203652 0.912820296 1.140347891 1 16.66772651 -5.652831518 1.138551377 1.02894651 0.706781958 0.767273514 0.064982315 0.285003452 0.686170885 0.023548418 0.0767613 2.22E-06 5.652831518 -0.322164552 GS(ph)SQPNLSTSHSEQEYGK ddPTM_A459_MK2206_30min_R2 1 GSSQPNLSTSHSEQEYGK 18 0 I3L2B2;O95208-3;O95208-2;O95208;F6PQP6;E9PBC1 I3L2B2 EPN2 Epsin-2 1 GS(0.499)S(0.499)QPNLS(0.001)TSHSEQEYGK 92.39 0.0033137 14142000 22797 50202 37531 67061 54132 55875 64303 47975 53393 43280 TRUE FALSE 24542.35585 47709.04168 38782.26481 61581.90178 52006.50569 58001.36228 55859.93886 54245.49722 58037.02663 41867.77714 0.586187219 1.139516949 0.926303412 1.470866284 1.24216066 1.385346112 1.33419882 1.295638339 1.386197945 1 15.3535527 -4.523592783 0.968767042 1.308434239 1.34E-16 0.617712838 0.158987229 1.878832449 1.008646973 0.048952645 2.894928649 3.00E-05 4.523592783 -1.308434239 GS(ph)SSQGPSQTSTPTDVTAIHL ddPTM_A459_MK2206_30min_R2 1 GSSSQGPSQTSTPTDVTAIHL 21 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 GS(0.272)S(0.272)S(0.063)QGPS(0.168)QT(0.1)S(0.1)T(0.026)PTDVTAIHL 90.581 0.0007256 3421000 3948.5 3561 3367.2 4462.8 4632 6085.7 3296.6 3794.4 4094.2 4464.3 TRUE FALSE 4250.800196 3384.165918 3479.460767 4098.174964 4450.124406 6317.295578 2863.75246 4290.341108 4450.306115 4318.630257 0.984293617 0.783620203 0.805686192 0.948952497 1.030448115 1.46280075 0.663115916 0.993449509 1.03049019 1 12.07635809 -6.00064331 3.81058633 1.031289484 0.851502515 0.14534987 0.186774707 0.438145098 14.19237445 0.056700735 0.081912963 9.99E-07 6.00064331 -0.17978697 GS(ph)SSSSPEHSASSDSTK ddPTM_A459_MK2206_30min_R2 1 GSSSSSPEHSASSDSTK 17 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 GS(0.2)S(0.2)S(0.2)S(0.2)S(0.2)PEHSASSDSTK 80.382 0.01101 21973000 9529.6 16446 12439 19457 22680 25356 23794 17795 18156 18210 TRUE FALSE 10259.1935 15629.31555 12853.71005 17867.30086 21789.46924 26320.94035 20669.81922 20120.8676 19735.17606 17615.80919 0.582385594 0.887232337 0.72966901 1.014276476 1.236926956 1.494165841 1.17336757 1.142205128 1.120310503 1 14.10458313 -5.949834116 2.804850555 1.214016364 0.744398317 0.689765923 0.137679097 0.153320735 2.451661209 0.042800713 0.066310177 1.12E-06 5.949834116 -0.469618047 GS(ph)VHSLDAGLLLPSGDPFSK ddPTM_A459_MK2206_30min_R2 1 GSVHSLDAGLLLPSGDPFSK 20 0 Q15276-2;Q15276;I3L456 Q15276-2 RABEP1 Rab GTPase-binding effector protein 1 1 GS(0.542)VHS(0.458)LDAGLLLPSGDPFSK 53.381 0.034842 2177400 8499.5 16691 14249 24927 16886 21030 20293 15499 19102 14222 TRUE FALSE 9150.228255 15862.14921 14724.05455 22890.38436 16222.97079 21830.31139 17628.50472 17524.77252 20763.45743 13757.9373 0.665087219 1.152945304 1.070222536 1.663794787 1.179171734 1.586743049 1.28133341 1.273793602 1.509198434 1 13.74797657 -4.519858385 1.183812276 1.357726882 2.14E-10 0.496270969 0.201163958 2.003665547 1.594224481 0.056638619 3.890954448 3.02E-05 4.519858385 -1.357726882 GS(ph)YGDLGGPIITTQVTIPK ddPTM_A459_MK2206_30min_R1 2 GSYGDLGGPIITTQVTIPK 19 0 P61978;P61978-2;P61978-3;Q5T6W2;S4R359 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 GS(1)YGDLGGPIITTQVTIPK;GS(1)YGDLGGPIITTQVTIPK 286.6 4.01E-73 107078000 14951.2 14646 16695.9 10502.5 12721.5 13687.4 19099.6 15345 17941.5 19911.6 TRUE FALSE 13679.52193 13692.54274 15562.62883 11311.40437 12214.77572 14462.36876 17825.50053 15210.84028 19806.58313 22378.39933 0.611282412 0.61186426 0.69543083 0.505460833 0.545828839 0.646264666 0.796549399 0.679710825 0.885075954 1 14.44981923 -8.193146341 0.746593657 0.999843287 0.596162375 0.796558632 0.065997125 0.28779998 0.347498471 0.066240467 0.027184815 6.41E-09 8.193146341 -0.403680912 GS(ph)YGDLGGPIITTQVTIPK ddPTM_A459_MK2206_30min_R2 2 GSYGDLGGPIITTQVTIPK 19 0 P61978;P61978-2;P61978-3;Q5T6W2;S4R359 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 GS(1)YGDLGGPIITTQVTIPK;GS(1)YGDLGGPIITTQVTIPK 267.6 1.58E-58 25125000 178785 152141 157825 150312 152690 139812 180049 139314 118712 189458 TRUE FALSE 192472.9171 144585.8992 163086.8067 138031.0288 146694.6234 145132.6436 156408.35 157522.8181 129037.3552 183276.001 1.050180689 0.788897065 0.889842674 0.753132042 0.800402795 0.79188024 0.853403333 0.859484151 0.704060294 1 17.48365836 -4.756522681 24.8948697 0.8209829 1.050181061 0.426861663 0.077393072 127.6738166 646375.969 0.017674977 0.141680148 1.75E-05 4.756522681 0.229198161 GSDALS(ph)ETSSVSHIEDLEK ddPTM_A459_MK2206_30min_R1 3 GSDALSETSSVSHIEDLEK 19 0 Q6P996-4;H3BND4;Q6P996-3;Q6P996-5;Q6P996 Q6P996-4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 GS(0.01)DALS(0.98)ET(0.01)SSVSHIEDLEK;GS(0.004)DALS(0.701)ET(0.281)S(0.011)S(0.003)VSHIEDLEK;GS(0.001)DALS(0.984)ET(0.011)S(0.003)SVS(0.001)HIEDLEK 133.51 0.00014902 25267900 7421.83 5938.26 8959.2 4948.77 10295 8462.9 10377.9 8974.6 7164.4 8041.9 TRUE FALSE 6790.564385 5551.678195 8351.074466 5329.925123 9884.92835 8942.062085 9685.609227 8896.136018 7909.165018 9038.191285 0.75131895 0.614246592 0.923976292 0.589711476 1.093684349 0.989364111 1.071631361 0.984282777 0.87508272 1 13.14181838 -6.267488632 24.99710417 1.004370713 0.726855913 0.65495177 0.10040344 297.1216283 1227783.079 0.029742095 0.034590608 5.40E-07 6.267488632 -0.2775148 GSDALS(ph)ETSSVSHIEDLEK ddPTM_A459_MK2206_30min_R2 4 GSDALSETSSVSHIEDLEK 19 0 Q6P996-4;H3BND4;Q6P996-3;Q6P996-5;Q6P996 Q6P996-4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 GS(0.017)DALS(0.441)ET(0.441)S(0.05)S(0.05)VS(0.001)HIEDLEK;GSDALS(0.998)ET(0.002)SSVSHIEDLEK;GS(0.02)DALS(0.624)ET(0.206)S(0.07)S(0.061)VS(0.019)HIEDLEK;GSDALS(0.767)ET(0.191)S(0.027)S(0.004)VS(0.011)HIEDLEK 157.98 2.64E-06 33169800 89503.1 121968.2 124960.2 163464.3 147011.1 137194.9 188936 142807.3 141156.2 159283.8 TRUE FALSE 96355.52615 115911.4365 129126.3107 150108.7438 141238.7055 142415.9481 164128.4762 161472.7044 153433.7111 154086.3827 0.625334468 0.752249709 0.838012474 0.974185656 0.916620295 0.924260441 1.065171843 1.04793624 0.995764249 1 17.23337984 -4.11768873 0.487400935 1.025892704 7.97E-14 0.909459335 0.039676884 2.410313565 0.271190812 0.02599178 1.624227594 7.63E-05 4.11768873 -1.025892704 GSDALSET(ph)SSVSHIEDLEK ddPTM_A459_MK2206_30min_R1 1 GSDALSETSSVSHIEDLEK 19 0 Q6P996-4;H3BND4;Q6P996-3;Q6P996-5;Q6P996 Q6P996-4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 GS(0.004)DALS(0.065)ET(0.801)S(0.049)S(0.081)VSHIEDLEK 126.9 0.0004872 17741000 5234.6 4228.4 5370 3484.7 6855.6 5308.5 6726.5 6365.9 5180.4 5163.9 TRUE FALSE 4789.369782 3953.130391 5005.499362 3753.092198 6582.526935 5609.062682 6277.787458 6310.243607 5718.921118 5803.642917 0.825235089 0.681146385 0.86247542 0.64667869 1.134206054 0.966472742 1.081697745 1.087290121 0.985401962 1 12.50274304 -6.26392287 24.99998801 1.045033327 0.756444894 0.779522528 0.075186727 93.94468059 945690.4048 0.021237804 0.025212286 5.45E-07 6.26392287 -0.288588434 GSDALSETS(ph)SVSHIEDLEK ddPTM_A459_MK2206_30min_R2 1 GSDALSETSSVSHIEDLEK 19 0 Q6P996-4;H3BND4;Q6P996-3;Q6P996-5;Q6P996 Q6P996-4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 GS(0.001)DALS(0.002)ET(0.005)S(0.493)S(0.493)VS(0.007)HIEDLEK 72.99 0.0078623 9452900 47962 60285 73026 67241 81792 73939 84965 49497 66360 69999 TRUE FALSE 51634.0076 57291.33456 75460.65039 61747.19521 78580.43511 76752.80046 73808.99344 55966.42785 72131.87285 67714.93836 0.762520189 0.846066406 1.11438705 0.911869621 1.160459376 1.133469251 1.089995727 0.826500462 1.065228362 1 16.04718652 -5.104467968 4.407187795 1.036231124 0.778842309 0.482390686 0.098162133 0.184358791 5.812440456 0.026063495 0.079138492 7.86E-06 5.104467968 -0.257388815 GSDALSETSS(ph)VSHIEDLEK ddPTM_A459_MK2206_30min_R1 3 GSDALSETSSVSHIEDLEK 19 0 Q6P996-4;H3BND4;Q6P996-3;Q6P996-5;Q6P996 Q6P996-4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 GSDALSETS(0.005)S(0.994)VS(0.001)HIEDLEK;GSDALSETS(0.005)S(0.993)VS(0.002)HIEDLEK;GSDALSETS(0.026)S(0.973)VS(0.001)HIEDLEK 174.2 5.81E-10 34258500 17016.3 17467 17613.4 16711.3 20579 17509.4 19846 18455.3 17540.6 15809 TRUE FALSE 15568.97433 16329.89513 16417.85148 17998.40722 19759.29485 18500.7671 18522.10955 18293.94726 19364.00814 17767.53827 0.876259507 0.919085969 0.924036365 1.012993863 1.112100875 1.041267891 1.042469095 1.02962757 1.089853183 1 14.11695619 -5.798178933 2.939779055 1.053762929 0.902373407 0.816815925 0.031039682 0.098817601 1.742289744 0.008855443 0.015133535 1.59E-06 5.798178933 -0.151389522 GSDALSETSS(ph)VSHIEDLEK ddPTM_A459_MK2206_30min_R2 2 GSDALSETSSVSHIEDLEK 19 0 Q6P996-4;H3BND4;Q6P996-3;Q6P996-5;Q6P996 Q6P996-4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 GS(0.001)DALS(0.034)ET(0.108)S(0.379)S(0.477)VSHIEDLEK;GSDALS(0.002)ET(0.009)S(0.211)S(0.766)VS(0.012)HIEDLEK 90.758 0.0017345 22525400 27366.2 42761 42303 54771 48921 40548 61153 47909 44146 48784 TRUE FALSE 29461.37731 40637.55092 43713.36091 50296.0341 47000.11573 42091.08255 53123.53764 54170.8708 47985.73928 47192.18208 0.624285126 0.861107691 0.926283952 1.065770471 0.995930124 0.891907954 1.125685131 1.147878068 1.016815438 1 15.52626026 -4.284873526 0.816409133 1.045729622 2.01E-15 0.76558751 0.069827407 2.509430403 0.731377169 0.027152674 2.870783525 5.19E-05 4.284873526 -1.045729622 GSDDAPYS(ph)PTAR ddPTM_A459_MK2206_30min_R1 2 GSDDAPYSPTAR 12 0 O75151;E7ET14;A0A087WW48 O75151 PHF2 Lysine-specific demethylase PHF2 1 GSDDAPYS(0.914)PT(0.086)AR;GSDDAPYS(0.945)PT(0.055)AR 184.34 5.38E-13 0 6609.4 6407.8 6256.2 5567.7 6492.2 6991 5934.3 5799 5027.1 4225.3 TRUE FALSE 6047.235823 5990.651055 5831.546575 5996.525219 6233.601927 7386.824378 5538.433675 5748.299954 5549.685035 4748.762063 1.273434159 1.261518471 1.228014059 1.262755459 1.312679356 1.55552632 1.166289993 1.210483886 1.168659318 1 12.21333576 -8.42771607 1.11935682 1.007798302 1.300095364 0.482944569 0.095373276 0.44899948 1.221579932 0.095396094 0.030848865 3.73E-09 8.42771607 0.292297062 GSDFDCELR ddPTM_A459_MK2206_30min_R1 3 GSDFDCELR 9 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ;; 185.72 1.56E-13 37300000 12277.6 12108.8 12083.4 10426.6 12917.5 11288.7 13289.1 11953.6 10744.5 9169.4 FALSE TRUE 11233.32565 11320.51492 11263.21247 11229.65854 12402.96862 11927.85644 12402.60839 11849.09094 11861.42922 10305.3745 1.090045359 1.098505923 1.09294548 1.089689515 1.203543707 1.157440367 1.203508751 1.149797219 1.150994486 1 13.33110931 -6.228960282 24.24202989 1.15533 1.093214995 0.162495963 0.053737853 642.6394306 479657.9843 0.014792999 0.019095114 5.90E-07 6.228960282 -0.062115005 GSDFDCELR ddPTM_A459_MK2206_30min_R2 4 GSDFDCELR 9 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ;;; 185.72 0.007034 184999000 583390 758760 669820 769590 675870 739440 731890 568660 648150 677380 FALSE TRUE 628054.787 721081.0817 692151.4645 706712.0352 649331.9478 767579.9074 635791.9638 642985.8145 704524.9154 655277.1461 0.958456724 1.100421533 1.056272859 1.078493336 0.9909272 1.171382082 0.970264212 0.981242545 1.075155634 1 19.32174569 GSDIDNPTLTVMDISPPS(ph)RSPR ddPTM_A459_MK2206_30min_R1 1 GSDIDNPTLTVMDISPPSRSPR 22 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 GSDIDNPTLTVMDIS(0.004)PPS(0.842)RS(0.154)PR 160.69 1.79E-09 17119000 2994.6 2857.5 3048.3 2507.3 3412.4 2673.9 3331.1 3558.6 2730.3 2275.8 TRUE FALSE 2739.893545 2671.476231 2841.389889 2700.41268 3276.476882 2825.293907 3108.888397 3527.487535 3014.124455 2557.743285 1.071215223 1.04446613 1.110897214 1.055779404 1.281003024 1.104604173 1.215481012 1.379140571 1.178431187 1 11.32065576 -6.246083784 24.73198021 1.208760283 1.071602649 0.272659405 0.096007195 854.0293708 1375512.733 0.027811825 0.035761024 5.67E-07 6.246083784 -0.137157634 GSDIDNPTLTVMDISPPS(ph)RSPR ddPTM_A459_MK2206_30min_R2 1 GSDIDNPTLTVMDISPPSRSPR 22 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 GSDIDNPTLTVMDIS(0.003)PPS(0.498)RS(0.498)PR 96.848 0.00010594 8686300 17518 30842 24354 32033 30965 32991 34864 26700 26607 25097 TRUE FALSE 18859.19155 29310.43113 25165.9502 29415.80143 29749.15851 34246.49562 30286.31492 30189.78167 28921.22877 24278.08695 0.776798913 1.207279272 1.036570561 1.211619412 1.225350193 1.41059284 1.247475346 1.243499199 1.191248257 1 14.56736712 -4.277177767 1.210851901 1.226472522 6.95E-36 0.534686314 0.113119973 3.388989868 1.836663906 0.033227505 7.030021967 5.28E-05 4.277177767 -1.226472522 GSDIDNPTLTVMDISPPSRS(ph)PR ddPTM_A459_MK2206_30min_R1 1 GSDIDNPTLTVMDISPPSRSPR 22 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 GSDIDNPTLT(0.002)VMDIS(0.024)PPS(0.218)RS(0.757)PR 64.422 0.0041256 6114600 1585.9 1432.1 1343.4 1291.1 1457.7 1278.5 1256.2 1453 1380.1 963.14 TRUE FALSE 1451.010877 1338.87003 1252.213751 1390.540746 1399.636722 1350.887565 1172.40119 1440.296574 1523.566334 1082.461055 1.340473979 1.236875936 1.156821066 1.284610416 1.293013468 1.247977985 1.083088565 1.330575884 1.407502217 1 10.0800994 -11.0956927 17.12073737 0.999999987 1.258111231 0.446183402 0.088158403 4.34E-08 1.15E-09 0.087995877 0.021342134 8.02E-12 11.0956927 0.258111244 GSDS(ph)DSEGDNPEK ddPTM_A459_MK2206_30min_R1 2 GSDSDSEGDNPEK 13 0 Q9UN37;I3L4J1 Q9UN37 VPS4A Vacuolar protein sorting-associated protein 4A 1 GS(0.002)DS(0.982)DS(0.016)EGDNPEK;GSDS(0.638)DS(0.362)EGDNPEK 238.88 1.04E-17 15725800 4814.1 4317.6 4062.2 3537.1 3200.9 3027.2 4309 4119.5 1506.18 3807.5 TRUE FALSE 4404.635515 4036.523455 3786.469182 3809.528055 3073.401375 3198.597448 4021.554472 4083.483646 1662.752801 4279.201845 1.029312399 0.943288866 0.884854073 0.890242665 0.71821837 0.747475245 0.939790788 0.954262919 0.388566107 1 12.06312602 -5.213558106 0.975562892 0.796410842 1.062464836 0.17902036 0.163576932 2.03704791 2.437107829 0.057356233 0.493266101 6.12E-06 5.213558106 0.266053994 GSDS(ph)DSEGDNPEK ddPTM_A459_MK2206_30min_R2 1 GSDSDSEGDNPEK 13 0 Q9UN37;I3L4J1 Q9UN37 VPS4A Vacuolar protein sorting-associated protein 4A 1 GSDS(0.921)DS(0.079)EGDNPEK 250.05 6.89E-23 30473000 61913 64188 62864 67261 53960 43837 67448 56473 48797 60750 TRUE FALSE 66653.10688 61000.51726 64959.85438 61765.56114 51841.25927 45505.24775 58591.99658 63854.215 53041.27486 58767.73248 1.13417864 1.03799338 1.105366017 1.051011474 0.882138158 0.774323695 0.997009653 1.086552302 0.902557792 1 15.84273661 -6.103779536 5.194969356 0.939821862 1.085838864 0.428490474 0.081029428 0.247023955 9.998429963 0.026287926 0.034518134 7.87E-07 6.103779536 0.146017001 GSDS(ph)DSEGDNPEKK ddPTM_A459_MK2206_30min_R1 1 GSDSDSEGDNPEKK 14 1 Q9UN37;I3L4J1 Q9UN37 VPS4A Vacuolar protein sorting-associated protein 4A 1 GS(0.012)DS(0.675)DS(0.313)EGDNPEKK 141.06 0.0010612 0 907.75 829 662.64 502.94 345.35 406.33 656.33 855.2 173.29 552 TRUE FALSE 830.5410957 775.0319493 617.661843 541.6765259 331.5939782 429.3360535 612.5474232 847.7230766 191.3041156 620.3859274 1.33874909 1.249273904 0.995609049 0.873128326 0.534496293 0.692046732 0.987365116 1.366444723 0.30836308 1 9.277022151 -5.358853705 2.060325494 0.828165119 1.331606825 0.328362402 0.26863951 0.429775038 3.40807665 0.077586439 0.252314453 4.38E-06 5.358853705 0.503441706 GSEEDPLLS(ph)PVETWK ddPTM_A459_MK2206_30min_R1 4 GSEEDPLLSPVETWK 15 0 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GSEEDPLLS(0.999)PVET(0.001)WK;GSEEDPLLS(0.998)PVET(0.002)WK;GSEEDPLLS(1)PVETWK;GSEEDPLLS(0.999)PVET(0.001)WK 239.51 4.73E-20 22198500 11034.09 10993.58 9844.45 8659.98 8397.85 9101.47 9471.22 9459.41 9651.19 9779.12 TRUE FALSE 10095.5827 10277.89594 9176.236162 9326.97316 8063.345852 9616.787366 8839.412195 9376.707376 10654.46574 10990.63121 0.918562593 0.935150652 0.834914391 0.848629435 0.733656302 0.87499864 0.804267928 0.853154582 0.969413451 1 13.42398663 -8.311183186 3.721414599 0.996302808 0.847486429 0.505583582 0.053440832 0.199070322 5.389014127 0.053104155 0.014608149 4.88E-09 8.311183186 -0.148816379 GSEEDPLLS(ph)PVETWK ddPTM_A459_MK2206_30min_R2 3 GSEEDPLLSPVETWK 15 0 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GSEEDPLLS(0.999)PVET(0.001)WK;GSEEDPLLS(1)PVETWK;GSEEDPLLS(0.996)PVET(0.004)WK 148.57 0.00039252 1651100 22039.8 22757.1 21844.3 19019.3 21870.5 16632.1 21597.8 14607.8 17525 22845 TRUE FALSE 23727.18403 21627.01551 22572.57806 17465.36235 21011.75428 17265.04622 18761.98292 16517.08962 19049.29282 22099.56952 1.07364915 0.978617049 1.021403518 0.790303283 0.950776632 0.781239028 0.84897504 0.747394179 0.861975741 1 14.43173065 -5.750623688 24.98087534 0.844599026 1.019962694 0.514265507 0.075332152 157.5497651 363887.3898 0.019431201 0.033230357 1.78E-06 5.750623688 0.175363668 GSEGDCS(ph)PEDK ddPTM_A459_MK2206_30min_R2 1 GSEGDCSPEDK 11 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 GS(0.001)EGDCS(0.999)PEDK 117.95 0.0054509 5830200 52194 37724 38510 38252 38238 28413 49077 43523 32152 50449 TRUE FALSE 56190.01277 35850.68102 39793.90418 35126.68924 36736.58399 29494.27662 42633.13095 49211.60554 34948.52284 48802.85326 1.151367369 0.734602152 0.815401181 0.719767122 0.75275484 0.604355579 0.873578656 1.008375582 0.716116385 1 15.57467788 -9.633472394 11.07605295 0.99999978 0.812876225 0.112563093 0.150911052 0 0 0.145498488 0.035288567 2.33E-10 9.633472394 -0.187123556 GSEGDCS(ph)PEDKNSVTAK ddPTM_A459_MK2206_30min_R1 2 GSEGDCSPEDKNSVTAK 17 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 GS(0.028)EGDCS(0.642)PEDKNS(0.165)VT(0.165)AK;GS(0.022)EGDCS(0.945)PEDKNS(0.028)VT(0.005)AK 68.952 0.019464 33316000 14569.3 15923.3 15795.1 13986.1 13226.5 11872.9 12783 13985.6 13184.9 12059 TRUE FALSE 13330.10453 14886.69028 14722.97262 15063.31185 12699.6605 12545.13334 11930.26939 13863.32537 14555.51754 13552.95996 0.983556697 1.098408784 1.086328939 1.11144074 0.937039623 0.925637896 0.880270393 1.022900194 1.07397333 1 13.72632035 -6.264049814 24.99742725 0.967413638 1.073138801 0.3806184 0.060051547 247.5782901 2370791.732 0.019657272 0.023311324 5.44E-07 6.264049814 0.105725163 GSEGDCS(ph)PEDKNSVTAK ddPTM_A459_MK2206_30min_R2 2 GSEGDCSPEDKNSVTAK 17 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 GS(0.018)EGDCS(0.941)PEDKNS(0.035)VT(0.006)AK;GS(0.034)EGDCS(0.963)PEDKNS(0.002)VTAK 78.088 0.010545 14624600 59790 67162 65896 59344 68507 41683 72602 50677 52496 70156 TRUE FALSE 64367.56837 63826.83274 68092.93975 54495.40537 65817.07096 43269.27577 63069.27019 57300.6579 57062.00719 67866.81547 0.948439498 0.940471898 1.003331883 0.802975725 0.969797544 0.637561605 0.929309409 0.844310397 0.84079394 1 16.0504187 -5.758986038 24.99999205 0.852301033 0.961720179 0.1914997 0.096256116 96.97928411 988211.1481 0.025154486 0.04107554 1.74E-06 5.758986038 0.109419146 GSEGSQS(ph)PGSSVDDAEDDPSR ddPTM_A459_MK2206_30min_R2 2 GSEGSQSPGSSVDDAEDDPSR 21 0 Q8IX07 Q8IX07 ZFPM1 Zinc finger protein ZFPM1 1 GSEGS(0.002)QS(0.407)PGS(0.212)S(0.379)VDDAEDDPSR;GSEGS(0.002)QS(0.998)PGSSVDDAEDDPSR 319.18 2.90E-136 12260900 12596 17501.6 17891 18656.3 17624.3 21974 21074.5 13726.7 18029.8 16102.2 TRUE FALSE 13560.35944 16632.49599 18487.47701 17132.02061 16932.28143 22810.23597 18307.39283 15520.82682 19597.99941 15576.78653 0.870549225 1.067774535 1.18686078 1.099843063 1.087020188 1.464373664 1.175299719 0.996407493 1.258154201 1 13.92711002 -4.744376416 1.937436473 1.166360516 0.759533128 0.314373239 0.128631232 1.076947592 4.018380429 0.035217576 0.821329024 1.80E-05 4.744376416 -0.406827388 GSEGYLAATYPT(ph)VGQTSPR ddPTM_A459_MK2206_30min_R1 1 GSEGYLAATYPTVGQTSPR 19 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 GSEGYLAAT(0.003)Y(0.002)PT(0.406)VGQT(0.295)S(0.295)PR 81.278 0.01362 12973000 4671.9 4138.7 4478 4093.7 4577.7 4547.4 5049.8 4064.3 4368.5 4094.2 TRUE FALSE 4274.530372 3869.269878 4174.045836 4408.997483 4395.360516 4804.869858 4712.937056 4028.766254 4822.621208 4601.420406 0.928958886 0.840885974 0.907121164 0.958181843 0.9552182 1.044214489 1.024235267 0.875548396 1.048072287 1 12.16786356 -5.870325792 1.870524079 0.989704048 0.882238498 0.435578301 0.050760211 0.325288891 2.320456316 0.016079609 0.029290238 1.35E-06 5.870325792 -0.10746555 GSEGYLAATYPTVGQT(ph)SPR ddPTM_A459_MK2206_30min_R2 1 GSEGYLAATYPTVGQTSPR 19 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 GSEGYLAATYPTVGQT(0.5)S(0.5)PR 144.75 0.00013299 26841000 35308 52781 46803 50353 47530 50364 51490 36762 46666 49743 TRUE FALSE 38011.20763 50159.97229 48363.38866 46238.99883 45663.73338 52280.63731 44729.30115 41566.91962 50724.92433 48119.88998 0.789927152 1.042395822 1.00506025 0.960912397 0.94895756 1.086466269 0.929538724 0.863819922 1.054136332 1 15.55434572 -4.75046239 24.92470673 0.983394278 0.789926721 0.475301883 0.062245003 429.2550474 974614.7521 0.015596124 0.228320536 1.78E-05 4.75046239 -0.193467557 GSEGYLAATYPTVGQTS(ph)PR ddPTM_A459_MK2206_30min_R1 3 GSEGYLAATYPTVGQTSPR 19 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 GSEGYLAATYPTVGQT(0.215)S(0.785)PR;GSEGYLAATYPTVGQT(0.226)S(0.774)PR;GSEGYLAATYPTVGQT(0.002)S(0.998)PR 321.67 3.72E-135 205216000 15355.2 13921.4 14509.5 12138.8 15989.5 13484.2 15298.3 14352.5 12504.6 12156.1 TRUE FALSE 14049.15961 13015.11433 13524.63557 13073.73248 15352.60436 14247.66375 14277.77832 14227.01761 13804.49792 13662.08944 1.028331696 0.952644497 0.98993903 0.956935067 1.123737655 1.042861256 1.045065499 1.041350056 1.010423623 1 13.73789052 -6.220407059 24.99999641 1.045979629 0.980438164 0.410654889 0.036284445 479.1083897 291909.0566 0.010422382 0.013455111 6.02E-07 6.220407059 -0.065541464 GSEGYLAATYPTVGQTS(ph)PR ddPTM_A459_MK2206_30min_R2 5 GSEGYLAATYPTVGQTSPR 19 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 GSEGYLAATYPT(0.003)VGQT(0.029)S(0.968)PR;GSEGYLAATYPT(0.007)VGQT(0.082)S(0.911)PR;GSEGYLAATYPTVGQT(0.002)S(0.998)PR;GSEGYLAAT(0.038)Y(0.019)PT(0.259)VGQT(0.307)S(0.376)PR;GSEGYLAATYPT(0.001)VGQT(0.213)S(0.787)PR 189.56 2.49E-15 194538800 369895 441785 395554 468145 452512 524309 495834 381031 451273 401739 TRUE FALSE 398214.4456 419846.5993 408741.5729 429896.056 434744.1052 544261.9464 430730.4002 430833.06 490523.9098 388630.2893 1.024661372 1.080323924 1.051749141 1.10618258 1.118657287 1.400461985 1.108329464 1.108593622 1.262186513 1 18.56803882 -6.259029355 2.860669828 1.183170242 1.060589744 0.198071372 0.101584696 0.412936969 6.802047207 0.032376486 0.040648586 5.51E-07 6.259029355 -0.122580499 GSEMDNNCS(ph)PTR ddPTM_A459_MK2206_30min_R2 2 GSEMDNNCSPTR 12 0 O95243-3;O95243-5;O95243-2;O95243 O95243-3 MBD4 Methyl-CpG-binding domain protein 4 1 GSEMDNNCS(0.5)PT(0.5)R;GSEMDNNCS(0.5)PT(0.5)R 94.673 0.018739 8046500 38533 34400 32364 35281 27101.5 30634 36408 33117 27541 35450 TRUE FALSE 41483.11611 32691.74602 33442.99961 32398.42944 26037.35894 31799.79834 31627.58587 37445.50561 29936.4664 34293.2694 1.209657663 0.953299192 0.975205928 0.94474601 0.759255661 0.927289783 0.922268026 1.091919967 0.872954574 1 15.06563783 -4.751361731 4.180506784 0.934608372 1.240503098 0.502896524 0.080970713 0.217237641 7.364869174 0.020968121 0.207724889 1.77E-05 4.751361731 0.305894726 GSEMDNNCS(ph)PTRK ddPTM_A459_MK2206_30min_R2 1 GSEMDNNCSPTRK 13 1 O95243-3;O95243-5;O95243-2;O95243 O95243-3 MBD4 Methyl-CpG-binding domain protein 4 1 GSEMDNNCS(0.893)PT(0.107)RK 162.64 0.00065235 5215200 15246 19612 15882 15631 15172 13404 16743 10682 12304 14946 TRUE FALSE 16413.24548 18638.0966 16411.49795 14353.8973 14576.27105 13914.09861 14544.62399 12078.17408 13374.17968 14458.31324 1.13521164 1.289092046 1.135090773 0.992778138 1.008158476 0.962359743 1.005969627 0.835379195 0.925016595 1 13.81961163 -5.725410476 2.214324579 0.951718105 1.216343638 0.757981857 0.059451957 0.142163354 1.418989571 0.018213696 0.035791268 1.88E-06 5.725410476 0.264625533 GSES(ph)PNSFLDQESR ddPTM_A459_MK2206_30min_R2 2 GSESPNSFLDQESR 14 0 A0A5H1ZRR2;Q6P9H4;Q5T4Y8;G9CGD6-3;G9CGD6;G9CGD6-2 A0A5H1ZRR2 CNKSR3 Connector enhancer of kinase suppressor of ras 3 1 GSES(0.94)PNS(0.06)FLDQESR;GS(0.078)ES(0.844)PNS(0.078)FLDQESR 134.02 0.00067854 15523000 30338.6 28375.8 30461.6 30994.9 40856 45771.1 41759.3 29129.6 32199.6 35846.7 TRUE FALSE 32661.34654 26966.69903 31477.17454 28462.51752 39251.78816 47512.95128 36276.25375 32936.93874 35000.263 34677.02511 0.941872794 0.777653185 0.90772419 0.820788906 1.131924899 1.370156498 1.046117815 0.949820194 1.009321385 1 15.08169252 -6.261578503 24.99867228 1.094405848 0.859249608 0.46851134 0.115822391 12.07111896 2169000.346 0.038318033 0.046299215 5.48E-07 6.261578503 -0.23515624 GSES(ph)PNSFLDQEYR ddPTM_A459_MK2206_30min_R1 4 GSESPNSFLDQEYR 14 0 A0A2R8YE27;A0A2R8YE71;A0A2R8Y7K8;A0A2R8Y5S6;A0A2R8Y622;A0A2R8YGJ7;A0A2U3TZH5;A0A2R8Y700;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2-4;Q8WXI2-2;Q8WXI2-5;Q8WXI2;A0A2R8Y604 A0A2R8YE27 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 GS(0.006)ES(0.984)PNS(0.01)FLDQEYR;GS(0.001)ES(0.996)PNS(0.003)FLDQEYR;GS(0.001)ES(0.946)PNS(0.053)FLDQEYR;GS(0.024)ES(0.965)PNS(0.011)FLDQEYR 223.14 4.00E-09 57409000 6835.2 6157.3 6224.2 5322.6 7144.9 6505.6 7226.6 6466.5 5804.7 5080.31 TRUE FALSE 6253.830347 5756.458651 5801.718646 5732.547574 6860.303503 6873.94145 6744.5267 6409.964072 6408.119337 5709.697157 1.095299834 1.008189838 1.016116702 1.004002037 1.201517929 1.203906488 1.181240706 1.122645194 1.122322106 1 12.47919851 -6.253559315 24.97688233 1.150134483 1.028223693 0.427322014 0.060168657 504.8548644 1600202.99 0.017600819 0.02230377 5.58E-07 6.253559315 -0.12191079 GSES(ph)PNSFLDQEYR ddPTM_A459_MK2206_30min_R2 1 GSESPNSFLDQEYR 14 0 A0A2R8YE27;A0A2R8YE71;A0A2R8Y7K8;A0A2R8Y5S6;A0A2R8Y622;A0A2R8YGJ7;A0A2U3TZH5;A0A2R8Y700;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2-4;Q8WXI2-2;Q8WXI2-5;Q8WXI2;A0A2R8Y604 A0A2R8YE27 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 GS(0.001)ES(0.997)PNS(0.001)FLDQEYR 187.08 8.65E-05 13155000 15668 16463 12827 17841 16104 13375 15140 11872 13687 13634 TRUE FALSE 16867.55413 15645.47136 13254.64578 16383.33323 15471.67604 13883.995 13152.09981 13423.71116 14877.47052 13189.1237 1.278898774 1.186240399 1.004967887 1.242185122 1.17306323 1.052685176 0.997192847 1.017786433 1.128010538 1 13.68706109 -6.789751218 5.288263352 1.036183615 1.172057803 0.45876699 0.074925575 0.185738844 13.59181213 0.027112043 0.02464555 1.62E-07 6.789751218 0.135874187 GSET(ph)PGATPGSK ddPTM_A459_MK2206_30min_R1 6 GSETPGATPGSK 12 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 GSET(0.999)PGATPGSK;GS(0.064)ET(0.936)PGATPGSK;GS(0.009)ET(0.991)PGATPGSK;GS(0.278)ET(0.715)PGAT(0.007)PGSK;GS(0.006)ET(0.994)PGATPGSK;GS(0.007)ET(0.952)PGAT(0.04)PGS(0.001)K 238.07 7.82E-13 489487000 63637.3 63634.1 65245.2 49902.8 60786.3 51858.9 61968.9 53599.6 44875.6 54418 TRUE FALSE 58224.61346 59491.50852 60816.53761 53746.3223 58365.05295 54795.1061 57835.06775 53130.98435 49540.57921 61159.71267 0.952009271 0.972723807 0.994388871 0.878786377 0.954305545 0.895934655 0.945639952 0.868725212 0.810019816 1 15.90029401 -6.083917996 0.83229523 0.895702796 0.974709423 0.17452711 0.053015365 1.099463646 1.569135597 0.026215853 0.055512145 8.24E-07 6.083917996 0.079006627 GSET(ph)PGATPGSK ddPTM_A459_MK2206_30min_R2 4 GSETPGATPGSK 12 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 GSET(1)PGATPGSK;GSET(1)PGATPGSK;GS(0.003)ET(0.995)PGAT(0.001)PGSK;GS(0.008)ET(0.986)PGAT(0.006)PGSK 182.25 0.00024364 348636000 307674 311296 314423 311736 302648 260745 341748 239135 236804 290787 TRUE FALSE 331229.758 295837.4933 324905.7059 286266.1716 290764.5188 270667.8337 296876.0771 270390.7656 257400.7839 281298.644 1.17750215 1.051684747 1.155020519 1.017659266 1.033650624 0.9622081 1.055376851 0.961223139 0.915044524 1 18.10174307 -5.72114336 0.543903898 0.964303971 1.180482883 0.629261324 0.04795176 1.130224203 0.509425764 0.032144179 0.138830619 1.90E-06 5.72114336 0.216178912 GSETDS(ph)AQDQPVK ddPTM_A459_MK2206_30min_R1 2 GSETDSAQDQPVK 13 0 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 GSET(0.001)DS(0.999)AQDQPVK;GSET(0.059)DS(0.941)AQDQPVK 164.66 1.29E-06 0 3184.5 3311.4 3412.1 3540.7 3331.3 2823.5 3436.2 2913.2 3111.4 2556.6 TRUE FALSE 2913.641553 3095.827258 3180.496159 3813.405327 3198.607267 2983.36413 3206.977368 2887.7302 3434.841164 2873.330909 1.014029238 1.077434989 1.106902149 1.327172347 1.113205324 1.038294657 1.116118355 1.005011358 1.195421367 1 11.48850844 -6.53124259 24.2875882 1.074287029 1.137583175 0.088287875 0.091545223 358.3568753 1040613.961 0.031073573 0.03112897 2.94E-07 6.53124259 0.063296146 GSETDS(ph)AQDQPVK ddPTM_A459_MK2206_30min_R2 2 GSETDSAQDQPVK 13 0 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 GS(0.001)ET(0.035)DS(0.964)AQDQPVK;GSET(0.014)DS(0.986)AQDQPVK 143.93 0.00069633 12997900 70737 91722 77931 73815 77786 77504 93142 71238 71310 86417 TRUE FALSE 76152.67911 87167.21886 80529.18064 67784.07838 74731.7308 80453.46903 80912.34352 80549.0512 77512.4149 83597.22037 0.910947502 1.042704751 0.96329974 0.810841294 0.893949948 0.962394069 0.96788318 0.963537434 0.927212826 1 16.35116735 -6.819221673 24.01305095 0.962156635 0.926781942 0.108455977 0.05677191 169.9302831 70617.06331 0.022121625 0.019509455 1.52E-07 6.819221673 -0.035374693 GSFS(ph)DTGLGDGK ddPTM_A459_MK2206_30min_R1 4 GSFSDTGLGDGK 12 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 GS(0.008)FS(0.872)DT(0.121)GLGDGK;GS(0.016)FS(0.906)DT(0.078)GLGDGK;GS(0.002)FS(0.947)DT(0.051)GLGDGK;GS(0.002)FS(0.686)DT(0.312)GLGDGK 139.19 0.0011784 308274000 13607.5 13803.7 14978.9 12522.3 12394.3 11332.2 13826.4 13074.2 12939.4 11249.3 TRUE FALSE 12450.11067 12905.07662 13962.174 13486.76972 11900.60879 11973.81937 12904.06608 12959.89365 14284.49693 12642.94821 0.984747423 1.020733171 1.104344791 1.066742463 0.94128431 0.947074936 1.020653242 1.02506895 1.129839077 1 13.6260453 GSFS(ph)DTGLGDGK ddPTM_A459_MK2206_30min_R2 2 GSFSDTGLGDGK 12 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 GS(0.004)FS(0.498)DT(0.498)GLGDGK;GS(0.005)FS(0.498)DT(0.498)GLGDGK 161.87 0.00048615 176183000 356200 389210 394120 368030 354500 327870 431030 351100 337880 377830 TRUE FALSE 383470.9459 369882.3974 407259.7641 337960.7717 340580.5488 340347.3226 374435.2432 396989.9755 367268.1917 365501.438 1.049163987 1.011986162 1.114249417 0.924649636 0.931817261 0.931179161 1.024442599 1.08615161 1.00483378 1 18.47951756 -10.75710118 14.77177019 1 1.00764402 0.001522624 0.061681151 0 0 0.064634005 0.015676049 1.75E-11 10.75710118 0.00764402 GSFSGRLS(ph)PAYSLGSLTGASPCQSPCVQR ddPTM_A459_MK2206_30min_R2 1 GSFSGRLSPAYSLGSLTGASPCQSPCVQR 29 1 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 GS(0.217)FS(0.192)GRLS(0.429)PAY(0.134)S(0.02)LGS(0.008)LT(0.001)GASPCQSPCVQR 40.92 0.045331 5402000 2648.2 8789.4 5046.8 6784.2 5691.6 5094.1 5387.1 7251.9 2512.8 8117.5 TRUE FALSE 2850.948228 8352.931177 5215.057793 6229.909158 5468.119186 5287.959545 4679.767299 8199.748229 2731.358802 7852.62664 0.363056638 1.063711744 0.664116357 0.793353542 0.696342694 0.673400098 0.595949294 1.04420452 0.347827412 1 12.93895959 -11.27194763 5.954960293 1.009181857 0.713440151 0.136292259 0.226507208 0.025480935 0.001073719 0.202390358 0.048316756 5.35E-12 11.27194763 -0.295741706 GSFSGRLSPAY(ph)SLGSLTGASPCQSPCVQR ddPTM_A459_MK2206_30min_R2 1 GSFSGRLSPAYSLGSLTGASPCQSPCVQR 29 1 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 GS(0.056)FS(0.056)GRLS(0.201)PAY(0.672)S(0.015)LGS(0.001)LTGASPCQSPCVQR 74.525 0.00060338 5403700 5962.7 10059 7792.5 11017 10205 9083.1 8295.7 6615.5 7080.1 9650.9 TRUE FALSE 6419.208897 9559.484687 8052.298061 10116.87586 9804.300424 9428.763735 7206.464625 7480.168564 7695.9143 9335.991923 0.687576526 1.023938834 0.862500538 1.08364231 1.050161622 1.009937006 0.771901335 0.801218406 0.824327438 1 13.1885876 -7.257834427 24.97688649 0.832796661 0.962432447 0.141215594 0.121117398 511.1152215 3541272.405 0.047136205 0.035052165 5.52E-08 7.257834427 0.129635786 GSGDISSDSIDHS(ph)PAK ddPTM_A459_MK2206_30min_R1 2 GSGDISSDSIDHSPAK 16 0 Q5JSS2;H0Y306;Q9H5I1-3;Q9H5I1-2;Q9H5I1 Q5JSS2 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 1 GSGDISSDSIDHS(1)PAK;GSGDISSDSIDHS(1)PAK 121.26 0.0010181 19190500 8528.9 5882.4 7236.8 5064.6 7557.1 6641.8 7818.4 6867.7 4830.5 4809.3 TRUE FALSE 7803.472268 5499.454691 6745.586179 5454.67637 7256.084705 7017.852976 7296.848801 6807.656423 5332.647761 5405.112392 1.44372063 1.017454271 1.248001094 1.009169833 1.342448441 1.298373182 1.349990208 1.259484712 0.986593316 1 12.4001089 -8.263417209 24.56471596 0.99329661 1.239045475 0.373340855 0.130746287 151.8885825 1886363.872 0.105977543 0.032747267 5.45E-09 8.263417209 0.245748865 GSGDISSDSIDHS(ph)PAK ddPTM_A459_MK2206_30min_R2 2 GSGDISSDSIDHSPAK 16 0 Q5JSS2;H0Y306;Q9H5I1-3;Q9H5I1-2;Q9H5I1 Q5JSS2 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 1 GSGDISSDSIDHS(1)PAK;GSGDISSDSIDHS(1)PAK 104.76 0.0025039 38617000 191553 244134 193854 269507 282652 208149 251537 190050 213065 243803 TRUE FALSE 206218.445 232010.6606 200316.9956 247487.416 271553.6623 216070.2561 218509.8897 214890.1875 231597.0086 235847.7281 0.874371132 0.983730742 0.849348846 1.049352555 1.151394014 0.916143046 0.926487151 0.911139528 0.981976848 1 17.84749618 -5.761447006 25 0.988110128 0.9106083 0.22438474 0.074769739 0.387950976 1259826.772 0.022620182 0.036142727 1.73E-06 5.761447006 -0.077501828 GSGDTSNFDDYEEEDIRVS(ph)ITEK ddPTM_A459_MK2206_30min_R1 1 GSGDTSNFDDYEEEDIRVSITEK 23 1 A0A087WVC4;A0A0A0MS54;P22694-10;P22694-4;P22694-3;P22694;P22694-5;P22694-7;P22694-6;P22694-9;P22694-2 A0A087WVC4 PRKACB cAMP-dependent protein kinase catalytic subunit beta 1 GSGDTSNFDDYEEEDIRVS(0.916)IT(0.084)EK 67.388 0.0019823 4293800 545.32 474.33 439.74 284.13 340.35 391.64 469.59 365.82 421.73 473.92 TRUE FALSE 498.9376704 443.4510308 409.891674 306.0137418 326.7931388 413.8143184 438.2645079 362.6216743 465.5703427 532.6327875 0.93673856 0.832564275 0.769557721 0.574530425 0.613543038 0.776922353 0.822826755 0.680809899 0.874092534 1 9.05699743 -8.519725752 4.288048387 0.999663461 0.747661561 0.380710646 0.10127973 0.191701357 11.01615214 0.106614269 0.027868331 3.02E-09 8.519725752 -0.252001899 GSGFTVTGGTEELPEEEGGGGS(ph)GGRR ddPTM_A459_MK2206_30min_R1 1 GSGFTVTGGTEELPEEEGGGGSGGRR 26 1 Q7Z3Z5;Q93074-3;Q93074;Q93074-2 Q7Z3Z5 TNRC11;MED12 Mediator of RNA polymerase II transcription subunit 12 1 GSGFTVTGGTEELPEEEGGGGS(1)GGRR 53.578 0.0072576 3241100 641.34 437.36 488.93 454.17 427.48 404.81 516.3 587.44 352.64 438.96 TRUE FALSE 586.7906652 408.8877845 455.7427938 489.1502521 410.4525664 427.7299924 481.858569 582.304074 389.2981899 493.3416788 1.189420417 0.82881257 0.923787333 0.991504009 0.831984371 0.867005588 0.97672382 1.180326129 0.789104604 1 8.946443365 -7.514939979 24.71252743 1.006534182 0.929890017 0.024317841 0.131327122 979.5259769 3049191.742 0.056658388 0.03465664 3.06E-08 7.514939979 -0.076644165 GSGGGGGGGGQGS(ph)TNYGK ddPTM_A459_MK2206_30min_R1 1 GSGGGGGGGGQGSTNYGK 18 0 Q99729-3;Q99729-4 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 GSGGGGGGGGQGS(0.88)T(0.12)NYGK 147.1 0.00011271 0 625.57 537.08 540.2 329.49 394.23 493.55 374.25 610.83 288.08 337.66 TRUE FALSE 572.3619865 502.1159944 503.5327291 354.8673769 378.5269843 521.4943745 349.2844654 605.4895777 318.0269469 379.49187 1.508232539 1.323127145 1.326860386 0.935111935 0.997457427 1.374191164 0.920400391 1.595527139 0.838033623 1 8.567925168 -5.584861752 7.685499195 1.119577609 1.393605042 0.266273473 0.221744966 0.326305806 34.691992 0.057563376 0.100257871 2.60E-06 5.584861752 0.274027434 GSGGGGGGGGQGST(ph)NYGK ddPTM_A459_MK2206_30min_R2 2 GSGGGGGGGGQGSTNYGK 18 0 Q99729-3;Q99729-4 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 GSGGGGGGGGQGS(0.05)T(0.95)NYGK;GSGGGGGGGGQGS(0.3)T(0.7)NYGK 203.17 3.01E-29 2946000 15264.5 15998.5 15684.3 16774.8 13533.4 12427 17035.8 18595.2 20018.4 12711.4 TRUE FALSE 16433.16186 15204.03775 16207.20673 15404.24518 13002.01072 12899.91819 14798.979 21025.65649 21759.56425 12296.62806 1.336395781 1.23643959 1.318020408 1.25272108 1.057363909 1.049061428 1.203498953 1.709871713 1.769555373 1 13.58597514 -7.744568227 24.47276271 1.554785101 1.202850275 0.258643113 0.213891633 192.6637003 279472.7504 0.098629098 0.056737921 1.80E-08 7.744568227 -0.351934826 GSGGGGGGGGQGSTNY(ph)GK ddPTM_A459_MK2206_30min_R1 1 GSGGGGGGGGQGSTNYGK 18 0 Q99729-3;Q99729-4 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 GSGGGGGGGGQGST(0.01)NY(0.99)GK 189.17 3.02E-09 17009000 4052 4388.5 3439.7 2615.6 2957.5 3135.6 4319.2 3403.7 1661.3 3124 TRUE FALSE 3707.356122 4102.807852 3206.222748 2817.053965 2839.696512 3313.134962 4031.074049 3373.94181 1833.99808 3511.024705 1.055918552 1.168549981 0.91318718 0.802345242 0.808794227 0.94363761 1.148118965 0.960956442 0.52235408 1 11.77767643 -5.316438638 6.662140515 0.890745684 1.111801018 0.249863077 0.155843276 0.309232951 30.73538383 0.042367645 0.090153662 4.83E-06 5.316438638 0.221055334 GSGGGGGPQVPHQS(ph)PPKR ddPTM_A459_MK2206_30min_R1 1 GSGGGGGPQVPHQSPPKR 18 1 Q9NYF3;D6RHW3 Q9NYF3 FAM53C Protein FAM53C 1 GSGGGGGPQVPHQS(1)PPKR 63.044 0.027258 3079800 2872.3 3597.8 3222.1 2562.3 2378.4 2600.9 2633 3345.5 3224 2985.2 TRUE FALSE 2627.995802 3363.582566 3003.392829 2759.64879 2283.663292 2748.16071 2457.357374 3316.250646 3559.146337 3355.029113 0.783300446 1.002549442 0.895191287 0.822540937 0.680668696 0.8191168 0.732439955 0.98844169 1.060839181 1 11.71210957 -7.892671193 6.165093444 1.028174587 0.824606906 0.541510902 0.083468483 0.176714396 8.881172029 0.050943194 0.02409149 1.28E-08 7.892671193 -0.203567681 GSGGGGGPQVPHQS(ph)PPKR ddPTM_A459_MK2206_30min_R2 1 GSGGGGGPQVPHQSPPKR 18 1 Q9NYF3;D6RHW3 Q9NYF3 FAM53C Protein FAM53C 1 GSGGGGGPQVPHQS(1)PPKR 57.248 0.04187 6084000 55710 64060 59688 55284 62619 50805 66372 53656 47599 79586 TRUE FALSE 59975.20043 60878.87355 61677.96813 50767.12036 60160.26342 52738.41988 57657.27667 60669.02343 51739.07498 76989.11534 0.779008827 0.790746501 0.80112582 0.659406465 0.781412582 0.685011377 0.748901665 0.788020789 0.672031037 1 16.23236687 -11.46240869 3.8311786 1.148860248 0.746224129 0.693433073 0.050845407 0.037000024 0.000583996 0.028175724 0.011689571 3.45E-12 11.46240869 -0.402636119 GSGGSFSKAQEEWTTGAWK ddPTM_A459_MK2206_30min_R1 1 GSGGSFSKAQEEWTTGAWK 19 1 H3BMY4;Q8TAC9-3;Q8TAC9;Q8TAC9-2 H3BMY4 SCAMP5 Secretory carrier-associated membrane protein 5 0 73.208 0.032507 43356000 5613.7 4991.1 5436.6 5989.3 4835.2 6254 6074.7 5487.4 7424 5766.5 FALSE TRUE 5136.225336 4666.178483 5067.578739 6450.596924 4642.603745 6608.096075 5669.467847 5439.42424 8195.751367 6480.897555 0.792517594 0.719989545 0.78192545 0.995324624 0.716351972 1.019626683 0.874796708 0.839301068 1.264601284 1 12.66197791 -7.099194679 0.483233927 1.069826891 0.755750599 0.384777625 0.127026177 1.112865806 0.56309356 0.12025926 0.126591602 7.96E-08 7.099194679 -0.314076292 GSGIFDEST(ph)PVQTR ddPTM_A459_MK2206_30min_R1 1 GSGIFDESTPVQTR 14 0 A6NGP5;Q9H910;Q9H910-3;H3BMV3;H3BTV5;Q9H910-2;H3BU16;H3BMT0 A6NGP5;Q9H910-2 HN1L Hematological and neurological expressed 1-like protein 1 GSGIFDES(0.026)T(0.974)PVQTR 206.67 1.73E-05 20058000 2394.6 2513.4 2076.6 2086.1 2154 1861 2269.4 1961.4 1668.5 1877.9 TRUE FALSE 2190.926695 2349.777203 1935.646178 2246.771783 2068.201619 1966.368212 2118.012467 1944.251687 1841.946546 2110.548429 1.038084066 1.113349104 0.917129477 1.064544055 0.979935637 0.931685899 1.003536539 0.921206858 0.872733608 1 11.04340222 -5.660585596 0.529777912 0.934827929 1.094839262 0.335475748 0.057831487 2.091460561 0.85173897 0.039535935 0.187711428 2.18E-06 5.660585596 0.160011333 GSGMSDLEGS(ph)GGR ddPTM_A459_MK2206_30min_R1 1 GSGMSDLEGSGGR 13 0 P85299;P85299-5;P85299-2;P85299-4;P85299-3 P85299 PRR5 Proline-rich protein 5 1 GSGMSDLEGS(1)GGR 88.224 0.033357 0 1576 1964.1 1911 1452.1 1875.2 1857.4 1744.2 1504.1 1578.2 1165.5 TRUE FALSE 1441.952924 1836.236733 1781.286644 1563.940994 1800.506813 1962.564383 1627.8476 1490.949812 1742.259538 1309.890939 1.100819069 1.401824135 1.35987401 1.193947486 1.374547116 1.498265485 1.242735217 1.138224388 1.330079845 1 10.35523098 -9.285351302 0.645757851 0.990990532 1.314281136 0.351327735 0.118686271 3.198772322 1.828008422 0.202575136 0.047244503 5.18E-10 9.285351302 0.323290604 GSGS(ph)PTHSLSQK ddPTM_A459_MK2206_30min_R1 2 GSGSPTHSLSQK 12 0 I3L419;I3L156;Q9BSJ6-2;Q9BSJ6;I3L2R2 I3L419 FAM64A Protein FAM64A 1 GS(0.011)GS(0.983)PT(0.005)HS(0.001)LSQK;GSGS(0.998)PT(0.002)HSLSQK 202.61 6.09E-05 109449000 17205.6 12640 12729.6 10790.9 15906.5 14731.1 15558.8 13576 8165.2 8855.4 TRUE FALSE 15742.17337 11817.1337 11865.55022 11622.01699 15272.91042 15565.16215 14520.90084 13457.30646 9014.001759 9952.473807 1.58173472 1.187356423 1.192221195 1.167751577 1.534584337 1.56394907 1.459024271 1.352156933 0.905704645 1 13.28083945 -10.3843594 7.525132305 0.999999999 1.332073333 0.185181749 0.205650496 2.96E-09 8.17E-10 0.206232933 0.050018833 4.13E-11 10.3843594 0.332073334 GSGS(ph)PTHSLSQK ddPTM_A459_MK2206_30min_R2 2 GSGSPTHSLSQK 12 0 I3L419;I3L156;Q9BSJ6-2;Q9BSJ6;I3L2R2 I3L419 FAM64A Protein FAM64A 1 GSGS(0.944)PT(0.05)HS(0.006)LSQK;GSGS(0.989)PT(0.011)HSLSQK 199.96 0.00010239 105796000 66842 98964 74277 107723 109947 101820 111852 83459 92941 82375 TRUE FALSE 71959.47491 94049.59167 76753.35811 98921.68631 105629.9283 105694.8314 97165.69804 94367.37786 101024.8402 79687.1105 0.903025276 1.180235939 0.963184104 1.241376249 1.325558521 1.326372995 1.21934021 1.184223863 1.267768897 1 16.28205876 -5.773066344 24.98570467 1.239559113 1.031957195 0.4239735 0.109512915 189.1278769 406425.3016 0.029396703 0.044017741 1.69E-06 5.773066344 -0.207601918 GSGS(ph)QSSVPSVDQFTGVGIR ddPTM_A459_MK2206_30min_R1 1 GSGSQSSVPSVDQFTGVGIR 20 0 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 GSGS(0.854)QS(0.142)S(0.004)VPSVDQFTGVGIR 248.94 6.81E-38 8871600 1628.1 1371.4 1708.7 1211.4 1404.2 1433.1 1687.6 1349.6 1390.9 1289.8 TRUE FALSE 1489.621546 1282.121611 1592.718205 1304.702238 1348.267741 1514.240884 1575.023283 1337.800589 1535.489032 1449.590161 1.027615657 0.884471794 1.098736903 0.900049043 0.930102712 1.044599311 1.086530059 0.922881946 1.05925735 1 10.50142935 -6.770605073 24.99946786 1.021826126 0.967010335 0.128852594 0.070750366 430.1714268 1173287.805 0.024093289 0.021541912 1.70E-07 6.770605073 -0.054815791 GSGTAS(ph)DDEFENLR ddPTM_A459_MK2206_30min_R1 4 GSGTASDDEFENLR 14 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GS(0.005)GT(0.083)AS(0.911)DDEFENLR;GSGT(0.004)AS(0.996)DDEFENLR;GSGTAS(1)DDEFENLR;GS(0.007)GT(0.006)AS(0.987)DDEFENLR 261.45 6.96E-36 584387000 9083.14 7748.95 8204.71 6831.33 9028.8 7452.1 8075.8 7856.46 6721.6 5851.29 TRUE FALSE 8310.571246 7244.491947 7647.797145 7357.48022 8669.163777 7874.031462 7537.078117 7787.771799 7420.334373 6576.19198 1.263736106 1.101624157 1.162952233 1.118805571 1.318265009 1.197354257 1.146115889 1.184237294 1.128363405 1 12.6830367 -8.812173467 1.245243981 0.999905971 1.186437627 0.463543486 0.061127502 0.948207575 2.564953119 0.059226334 0.017960925 1.54E-09 8.812173467 0.186531656 GSGTAS(ph)DDEFENLR ddPTM_A459_MK2206_30min_R2 4 GSGTASDDEFENLR 14 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GSGT(0.002)AS(0.998)DDEFENLR;GSGT(0.01)AS(0.99)DDEFENLR;GS(0.001)GT(0.006)AS(0.993)DDEFENLR;GSGT(0.002)AS(0.998)DDEFENLR 169.98 0.00016771 1055154000 41773.3 61422.9 52424.9 61947.7 62249.5 59348.8 61853.7 45610 56784.1 50433.5 TRUE FALSE 44971.49597 58372.7281 54172.72 56886.37475 59805.27185 61607.36017 53732.23489 51571.3836 61723.07838 48787.85903 0.921776378 1.196460129 1.110372972 1.165994489 1.225822839 1.262760068 1.101344391 1.057053632 1.265131933 1 15.57423455 -4.75584896 24.98129388 1.15869281 0.921775996 0.410661127 0.08323641 174.9270337 781595.3405 0.020155856 0.17262324 1.75E-05 4.75584896 -0.236916813 GSHQIS(ph)LDNPDYQQDFFPK ddPTM_A459_MK2206_30min_R1 1 GSHQISLDNPDYQQDFFPK 19 0 P00533;E9PFD7 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 GS(0.011)HQIS(0.989)LDNPDYQQDFFPK 113.31 0.00035453 4094100 2170.9 1526.1 1230.7 1596 1718.7 2449.2 1639.2 1338.4 1254.6 1480.2 TRUE FALSE 1986.253555 1426.750613 1147.163513 1718.924197 1650.24054 2587.871587 1529.851959 1326.69851 1385.02016 1663.578351 1.193964537 0.857639565 0.689575885 1.033269155 0.991982457 1.555605473 0.919615213 0.797496859 0.832554811 1 10.7000741 -7.510044335 24.81944601 0.860726631 1.042241605 0.123002392 0.217211544 1294.885201 2504090.45 0.102109276 0.06508298 3.09E-08 7.510044335 0.181514974 GSHQIS(ph)LDNPDYQQDFFPK ddPTM_A459_MK2206_30min_R2 1 GSHQISLDNPDYQQDFFPK 19 0 P00533;E9PFD7 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 GS(0.003)HQIS(0.997)LDNPDYQQDFFPK 107.56 0.00051287 2881900 32379 26697 24913 20521 20259 25580 35516 20856 39452 20927 TRUE FALSE 34857.96114 25371.2658 25743.58699 18844.36866 19463.52987 26553.46482 30852.70654 23581.95081 42883.46365 20244.1537 1.721877913 1.25326384 1.271655381 0.93085485 0.961439542 1.311660898 1.524030443 1.164877088 2.118313478 1 14.30521771 -7.006159433 24.18148842 1.458730867 1.207307471 0.08729352 0.338232136 430.5917624 1690478.265 0.120256231 0.102462746 9.86E-08 7.006159433 -0.251423397 GSIS(ph)SGLEFVSHNPPSEAATPPVAR ddPTM_A459_MK2206_30min_R1 2 GSISSGLEFVSHNPPSEAATPPVAR 25 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB06;F8VRK6 Q99700;F8WB06 ATXN2 Ataxin-2 1 GS(0.257)IS(0.372)S(0.372)GLEFVSHNPPSEAATPPVAR;GS(0.324)IS(0.629)S(0.047)GLEFVSHNPPSEAATPPVAR 110.33 1.28E-07 9347300 1573.31 1445.77 1355.61 1150.95 1463.71 1761.92 1589.39 1167.66 1199.1 1140.05 TRUE FALSE 1439.491723 1351.65011 1263.59497 1239.596368 1405.407331 1861.678388 1483.364693 1157.451272 1323.750736 1281.288001 1.123472413 1.054915139 0.986191215 0.967461154 1.096870751 1.452974184 1.157713716 0.90334981 1.033140664 1 10.32337908 -7.753096874 24.98261131 0.976183921 1.118354167 0.199740228 0.129376906 326.361095 977333.7617 0.069974256 0.03953832 1.77E-08 7.753096874 0.142170246 GSISSGLEFVSHNPPSEAAT(ph)PPVAR ddPTM_A459_MK2206_30min_R1 1 GSISSGLEFVSHNPPSEAATPPVAR 25 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB06;F8VRK6 Q99700;F8WB06 ATXN2 Ataxin-2 1 GSISSGLEFVSHNPPS(0.045)EAAT(0.955)PPVAR 130.62 8.08E-08 7817500 1355.1 1149.3 981.8 894.02 1434.1 1139 1235 1244.4 852.85 932.92 TRUE FALSE 1239.841629 1074.480361 915.1581515 962.8775753 1376.97676 1203.489196 1152.615403 1233.520342 941.5068095 1048.497173 1.182494013 1.024781362 0.87282844 0.91834065 1.313286097 1.147823024 1.099302347 1.17646511 0.897958367 1 10.03410726 -4.751386039 24.34362663 1.058762561 1.182494359 0.08029564 0.131516892 952.1229199 2305290.959 0.034872258 0.449479976 1.77E-05 4.751386039 0.123731798 GSISSGLEFVSHNPPSEAAT(ph)PPVAR ddPTM_A459_MK2206_30min_R2 2 GSISSGLEFVSHNPPSEAATPPVAR 25 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB06;F8VRK6 Q99700;F8WB06 ATXN2 Ataxin-2 1 GSISSGLEFVS(0.001)HNPPS(0.259)EAAT(0.741)PPVAR;GSISSGLEFVSHNPPS(0.181)EAAT(0.819)PPVAR 107.32 3.73E-07 15651000 20057.9 23429 21028 30032 25310 24284 29622 18821.3 18991.8 22060.6 TRUE FALSE 21593.54825 22265.54993 21729.06302 27578.28953 24316.20223 25208.14464 25732.59582 21281.30853 20643.67243 21340.76443 1.011845115 1.043334226 1.018195159 1.292282178 1.139425081 1.181220322 1.205795411 0.997213975 0.967335191 1 14.38132423 -7.85122934 7.790118512 0.984204332 1.128706018 0.370219986 0.083270065 0.285886301 21.50331745 0.049774209 0.023814902 1.41E-08 7.85122934 0.144501687 GSIST(ph)PNSPVK ddPTM_A459_MK2206_30min_R2 1 GSISTPNSPVK 11 0 Q96AY4;A0A087WW06 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 GSIS(0.002)T(0.549)PNS(0.448)PVK 128.68 0.0063865 8020500 49749 57006 54780 51323 54433 59091 68212 49332 58346 65046 TRUE FALSE 53557.82169 54175.16493 56606.33786 47129.74673 52295.68692 61339.74941 59255.68246 55779.86178 63420.82961 62923.55435 0.851156967 0.860967971 0.899604901 0.749000072 0.831098743 0.974829697 0.94170908 0.886470295 1.007902848 1 15.94131255 -6.757196783 24.99646454 0.953807202 0.838058812 0.626425068 0.047588762 79.10314984 466058.5073 0.016367797 0.015817536 1.75E-07 6.757196783 -0.11574839 GSISTPNS(ph)PVK ddPTM_A459_MK2206_30min_R1 1 GSISTPNSPVK 11 0 Q96AY4;A0A087WW06 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 GSIST(0.009)PNS(0.99)PVK 112.44 0.0076726 3763200 2950.5 3187.7 3042.6 2806 2865.2 3119.5 3298.4 3262.4 3266.2 3046 TRUE FALSE 2699.544481 2980.180151 2836.076789 3022.118606 2751.073017 3296.123394 3078.369754 3233.877181 3605.733178 3423.361476 0.78856542 0.87054206 0.828447948 0.882792725 0.803617449 0.962832414 0.899224279 0.944649638 1.053272698 1 11.74119792 -7.429708352 0.734989055 1.022845805 0.832575988 0.72014951 0.04340138 0.359967196 0.373380696 0.036310936 0.020599397 3.72E-08 7.429708352 -0.190269817 GSISTPNS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 GSISTPNSPVK 11 0 Q96AY4;A0A087WW06 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 GS(0.001)IS(0.009)T(0.125)PNS(0.865)PVK;GSIS(0.019)T(0.07)PNS(0.911)PVK 101.3 0.015406 11795100 75008 89516 89254 82755 90652 84790 107571 79288 93593 101328 TRUE FALSE 80750.67015 85070.76561 92229.68381 75993.65178 87092.54699 88016.74287 93446.79848 89651.21384 101733.55 98021.67566 0.823804221 0.86787708 0.940911112 0.775273951 0.88850294 0.897931425 0.953327903 0.914606012 1.037867893 1 16.58081319 -7.589942022 0.872898634 1.011545901 0.857571318 0.61559382 0.046092336 0.419749565 0.589361382 0.039621892 0.018616203 2.57E-08 7.589942022 -0.153974583 GSKPGGVGTGLGGSSGTET(ph)LEK ddPTM_A459_MK2206_30min_R1 1 GSKPGGVGTGLGGSSGTETLEK 22 1 Q6GQQ9;Q6GQQ9-2 Q6GQQ9 OTUD7B OTU domain-containing protein 7B 1 GSKPGGVGTGLGGS(0.003)S(0.015)GT(0.052)ET(0.93)LEK 104.96 9.28E-05 9883800 1854.2 1352.8 1121.8 1086.8 1184.3 820.08 919.79 1186.2 972.99 734.22 TRUE FALSE 1696.490553 1264.732474 1045.655342 1170.505524 1137.126823 866.5122209 858.4324874 1175.829178 1074.135792 825.1807167 2.055901839 1.532673327 1.267183443 1.418483855 1.378033684 1.050087821 1.04029635 1.424935356 1.301697641 1 9.688566298 -1.52287933 0.760062124 1.214930383 160.9159293 0.756656391 0.144682017 203.7323175 0.843242162 0.056172192 55777.37735 0.02999996 1.52287933 159.7009989 up GSLAEAVGS(ph)PPPAATPTPTPPTR ddPTM_A459_MK2206_30min_R1 3 GSLAEAVGSPPPAATPTPTPPTR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 GSLAEAVGS(1)PPPAATPTPTPPTR;GSLAEAVGS(1)PPPAATPTPTPPTR;GS(0.002)LAEAVGS(0.998)PPPAATPTPTPPTR 190.79 2.90E-22 52585300 11274.4 10813 10496.5 7817.2 10527.1 8989.4 10242 9453.6 9366.5 8799.7 TRUE FALSE 10315.45308 10109.07173 9784.026825 8419.282098 10107.78332 9498.37206 9558.774868 9370.948172 10340.18119 9889.87327 1.043031877 1.022163931 0.989297492 0.851303335 1.022033654 0.96041393 0.966521472 0.947529651 1.045532224 1 13.27173632 -10.69867539 14.76315046 0.999994785 0.979492534 0.004650616 0.054874 0 0 0.053550561 0.012987919 2.00E-11 10.69867539 -0.020502251 GSLAEAVGS(ph)PPPAATPTPTPPTR ddPTM_A459_MK2206_30min_R2 2 GSLAEAVGSPPPAATPTPTPPTR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 GSLAEAVGS(0.999)PPPAAT(0.001)PTPTPPTR;GS(0.041)LAEAVGS(0.959)PPPAATPTPTPPTR 230.62 4.91E-31 90133000 148214 161080 146978 174731 162171 162246 170741 126172 144146 167484 TRUE FALSE 159561.3778 153081.0014 151878.1732 160454.9184 155803.3517 168420.3852 148322.5016 142663.1136 156683.5585 162019.0108 0.984831206 0.944833577 0.937409582 0.990346241 0.961636236 1.03951002 0.915463567 0.880533173 0.967068974 1 17.30580358 -8.544030088 22.88264806 1.000000004 0.956265384 0.090876864 0.041015132 4411.36025 4772440.418 0.041777215 0.010786831 2.86E-09 8.544030088 -0.043734621 GSLAEAVGSPPPAAT(ph)PTPTPPTR ddPTM_A459_MK2206_30min_R1 4 GSLAEAVGSPPPAATPTPTPPTR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 GSLAEAVGSPPPAAT(0.882)PT(0.115)PT(0.003)PPTR;GSLAEAVGSPPPAAT(0.998)PT(0.002)PTPPTR;GSLAEAVGS(0.095)PPPAAT(0.87)PT(0.029)PT(0.006)PPT(0.001)R;GSLAEAVGS(0.047)PPPAAT(0.722)PT(0.172)PT(0.056)PPT(0.003)R 285.25 4.64E-79 36053900 7126.96 7009.89 6688.48 5856.51 7349.38 6929.03 6872.73 6475.24 6778.34 6928.78 TRUE FALSE 6520.774627 6553.544887 6234.484613 6307.579415 7056.638632 7321.345691 6414.262722 6418.627659 7482.9727 7787.169576 0.837374166 0.841582403 0.800609843 0.809996412 0.906187873 0.940180591 0.823696294 0.824256824 0.960936143 1 12.92688333 -14.52286843 0.109829299 1.486485677 0.772354246 0.527392668 0.04648768 147.0882334 1.070454924 15.85109237 0.629911505 3.00E-15 14.52286843 -0.714131431 GSLAEAVGSPPPAAT(ph)PTPTPPTR ddPTM_A459_MK2206_30min_R2 2 GSLAEAVGSPPPAATPTPTPPTR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 GSLAEAVGSPPPAAT(0.991)PT(0.009)PTPPTR;GSLAEAVGS(0.015)PPPAAT(0.737)PT(0.241)PT(0.006)PPTR 225.88 8.11E-28 32314000 64116 67626 79938 81747 85902 85130 84977 58777 74717 92687 TRUE FALSE 69024.77026 64267.79118 82603.09302 75068.0086 82529.05586 88369.6818 73819.41782 66459.35571 81215.7496 89662.63078 0.769827627 0.716773427 0.921265552 0.837227371 0.920439821 0.985579846 0.82330194 0.741215768 0.905792624 1 16.45221921 -5.258394099 24.96158383 0.882579769 0.743300518 0.387047739 0.07404539 279.7259698 2292832.236 0.019711154 0.047752395 5.52E-06 5.258394099 -0.139279251 GSLAPQDS(ph)DSEVSQNR ddPTM_A459_MK2206_30min_R2 1 GSLAPQDSDSEVSQNR 16 0 J3KN34;P26045-2;P26045;P26045-3 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 GSLAPQDS(0.97)DS(0.029)EVSQNR 245.67 1.91E-22 9575000 15794 21757 23499 25235 18728 24614 22933 16873 21343 19877 TRUE FALSE 17003.20078 20676.57902 24282.44493 23173.21978 17992.64462 25550.70302 19921.86955 19078.35903 23199.37556 19228.41512 0.884274688 1.075313742 1.262841726 1.205154956 0.935732067 1.32879922 1.036064045 0.992196128 1.206515223 1 14.23095223 -10.02358977 11.13522061 0.999999754 1.106375802 0.047077446 0.138250775 0 0 0.131930493 0.031997845 9.47E-11 10.02358977 0.106376049 GSLAS(ph)LDSLR ddPTM_A459_MK2206_30min_R1 1 GSLASLDSLR 10 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14;O60716-27;O60716-29;O60716-25;O60716-26;O60716-31;O60716-32;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 1 GS(0.049)LAS(0.951)LDSLR 141.91 0.001257 83819000 1756.9 1722.5 1598.2 1200.8 1582.1 1401.6 1574.7 1282.8 1293 1454.2 TRUE FALSE 1607.466429 1610.364937 1489.718637 1293.285824 1519.081607 1480.957381 1469.654636 1271.584615 1427.411977 1634.357275 0.983546532 0.985320017 0.911501212 0.791311572 0.929467278 0.906140538 0.899224826 0.778033441 0.873378177 1 10.67450768 -5.372565066 3.987380489 0.875485195 0.984525088 0.297508113 0.060648938 0.251080475 6.869297538 0.015952133 0.036081437 4.24E-06 5.372565066 0.109039893 GSLAS(ph)LDSLR ddPTM_A459_MK2206_30min_R2 2 GSLASLDSLR 10 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14;O60716-27;O60716-29;O60716-25;O60716-26;O60716-31;O60716-32;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 1 GSLAS(1)LDSLR;GS(0.01)LAS(0.985)LDS(0.005)LR 137.01 0.0017935 13377800 35337 33136 34861 39958 32174 41226 39028 29390 27528 34454 TRUE FALSE 38042.42789 31490.51442 36023.24834 36693.30358 30910.6871 42794.88432 33903.57672 33231.37391 29922.33568 33329.7688 1.141394893 0.944816468 1.080813028 1.100916835 0.927419787 1.283983834 1.017216079 0.997047838 0.897766074 1 15.02452369 -7.751001328 3.203453552 0.95372106 1.072340215 0.213181237 0.097616159 0.386325636 8.138851845 0.055583769 0.026382495 1.77E-08 7.751001328 0.118619156 GSLAS(ph)LDSLRK ddPTM_A459_MK2206_30min_R1 1 GSLASLDSLRK 11 1 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14;O60716-27;O60716-29;O60716-25;O60716-26;O60716-31;O60716-32;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 1 GSLAS(0.986)LDS(0.013)LRK 65.495 0.041245 66608000 2310.8 3063.4 2256.4 2037.4 2406.3 3093.4 3539.4 3102.7 3360.6 2875.4 TRUE FALSE 2114.254326 2863.972103 2103.241855 2194.320901 2310.451976 3268.545635 3303.293084 3075.573421 3709.946396 3231.62626 0.654238503 0.886232464 0.650830785 0.679014442 0.714950242 1.011424395 1.022176705 0.95171074 1.148012207 1 11.65804464 -6.768955957 7.616934567 1.024081259 0.720269817 0.800406496 0.077298203 0.058850001 21.28563688 0.026267791 0.024289147 1.70E-07 6.768955957 -0.303811441 GSLGIS(ph)QEEQ ddPTM_A459_MK2206_30min_R1 2 GSLGISQEEQ 10 0 H3BRR0;Q9NZD8-2;Q9NZD8 H3BRR0 SPG21 Maspardin 1 GS(0.001)LGIS(0.999)QEEQ;GS(0.002)LGIS(0.998)QEEQ 105.13 0.012697 19511600 9955.7 9585.6 11003.1 9133.3 10867.2 9811.4 12169.8 11395.8 10069.5 9060.6 TRUE FALSE 9108.915436 8961.575698 10256.24023 9836.748349 10434.33641 10366.91299 11357.97485 11296.16772 11116.26056 10183.09553 0.894513403 0.880044351 1.007182953 0.965988026 1.024672348 1.018051236 1.115375458 1.109305877 1.09163864 1 13.31388857 -5.716288675 0.647822495 1.084548999 0.85333917 0.724172978 0.040741065 0.650112723 0.439881866 0.023209548 0.095597996 1.92E-06 5.716288675 -0.231209828 GSLGIS(ph)QEEQ ddPTM_A459_MK2206_30min_R2 2 GSLGISQEEQ 10 0 H3BRR0;Q9NZD8-2;Q9NZD8 H3BRR0 SPG21 Maspardin 1 GSLGIS(1)QEEQ;GSLGIS(1)QEEQ 107.03 0.011542 16217200 182973 186853 183818 206070 159848 169474 204970 175594 161874 202228 TRUE FALSE 196981.5536 177574.1517 189946.4004 189233.4218 153571.5643 175923.4518 178057.1928 198544.7387 175953.5079 195629.3169 1.006912239 0.907707263 0.970950588 0.96730605 0.785013038 0.899269366 0.910176427 1.014902786 0.899423004 1 17.57776306 -10.16815091 8.914234441 0.999999409 0.927656112 0.101329093 0.063240417 0 0 0.062853104 0.015244117 6.79E-11 10.16815091 -0.072343297 GSLGS(ph)PGNR ddPTM_A459_MK2206_30min_R1 1 GSLGSPGNR 9 0 E9PNW1;Q9Y6N9-3;Q9Y6N9-2;Q9Y6N9-4;Q9Y6N9;Q9Y6N9-5 E9PNW1 USH1C Harmonin 1 GS(0.002)LGS(0.998)PGNR 105.17 0.013905 2475400 2834 2874.7 3103.6 2181.7 3544.6 2994.3 3606.4 2631.3 1616.1 2779 TRUE FALSE 2592.953418 2687.556507 2892.936279 2349.734912 3403.411076 3163.834678 3365.823636 2608.294822 1784.099378 3123.2835 0.830201107 0.860490733 0.926248379 0.752328411 1.089690089 1.012983509 1.077655498 0.835113054 0.571225564 1 11.60884781 -12.13009198 2.242128096 3.419475611 0.894774096 0.047831952 0.148418613 5733242.309 1056726.443 71639473.96 0.038837872 7.41E-13 12.13009198 -2.524701515 GSLGS(ph)QGAKDEPEEELQK ddPTM_A459_MK2206_30min_R2 1 GSLGSQGAKDEPEEELQK 18 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GS(0.235)LGS(0.765)QGAKDEPEEELQK 63.225 0.021445 8885700 26971 25305 22690 25238 26286 22397 36352 21539 23724 27936 TRUE FALSE 29035.9205 24048.3905 23446.47328 23175.97467 25253.87956 23249.33353 31578.93873 24354.22125 25787.47064 27024.45061 1.074431481 0.889875278 0.867602218 0.857592815 0.934482626 0.860307352 1.168532126 0.901192095 0.954227378 1 14.72197767 GSLLPTS(ph)PR ddPTM_A459_MK2206_30min_R2 2 GSLLPTSPR 9 0 H7C128;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2 H7C128 BRD8 Bromodomain-containing protein 8 1 GSLLPT(0.004)S(0.996)PR;GSLLPT(0.004)S(0.996)PR 102.06 0.016467 94889000 198911 238810 218931 248350 243990 224340 228700 176673 194023 200122 TRUE FALSE 214139.7791 226951.0427 226230.0503 228059.0106 234409.7266 232877.4159 198671.4153 199764.7677 210898.7698 193592.0355 1.106139406 1.17231601 1.168591723 1.17803922 1.210843855 1.202928701 1.026237545 1.031885259 1.089397966 1 17.56266008 -7.265257587 24.97419732 1.039537291 1.17483489 0.799768765 0.033384564 147.444661 964401.2107 0.013968558 0.009818932 5.43E-08 7.265257587 0.1352976 GSLLTILGSPS(ph)PER ddPTM_A459_MK2206_30min_R2 1 GSLLTILGSPSPER 14 0 Q96A19 Q96A19 CCDC102A Coiled-coil domain-containing protein 102A 1 GSLLTILGS(0.292)PS(0.707)PER 85.163 0.02495 1498100 13162 10919 13838 14588 12173 13989 13790 13069 13168 18441 TRUE FALSE 14169.69284 10376.77834 14299.35201 13396.11374 11695.02686 14521.3612 11979.35644 14777.16317 14313.32884 17839.27168 0.794297721 0.581681726 0.801565909 0.750933893 0.655577597 0.814010878 0.671516004 0.828350139 0.802349395 1 14.1227691 -8.924397018 0.609950628 1.00705555 0.71655157 0.558511858 0.072632712 1.039921904 0.725685591 0.082543369 0.029040298 1.19E-09 8.924397018 -0.29050398 GSLPQLVS(ph)PIVSR ddPTM_A459_MK2206_30min_R1 2 GSLPQLVSPIVSR 13 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 GS(0.001)LPQLVS(0.998)PIVS(0.001)R;GSLPQLVS(0.99)PIVS(0.01)R 177.39 0.00010385 137426000 5923.4 5613.2 6205.3 4846.2 5878.2 5242.3 6498.6 5776.8 4881.6 4316.6 TRUE FALSE 5419.583725 5247.77966 5784.101525 5219.455164 5644.058847 5539.114496 6065.090251 5726.294047 5389.059789 4851.372997 1.117123694 1.081710201 1.192260733 1.075871752 1.163394126 1.141762239 1.250180156 1.180345039 1.110831881 1 12.24417739 -5.240527327 24.71742545 1.1484104 1.099416948 0.042189773 0.065494407 1852.452467 2189533.9 0.016089685 0.042447366 5.75E-06 5.240527327 -0.048993452 GSLPQLVS(ph)PIVSR ddPTM_A459_MK2206_30min_R2 4 GSLPQLVSPIVSR 13 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 GSLPQLVS(1)PIVSR;GSLPQLVS(0.994)PIVS(0.006)R;GSLPQLVS(0.961)PIVS(0.039)R;GSLPQLVS(0.973)PIVS(0.027)R 142.54 0.00077006 130782000 137138 175485 167766 193287 146324 183250 174753 136750 148818 155351 TRUE FALSE 147637.3907 166770.6701 173359.2347 177494.8338 140578.5845 190223.7072 151807.7212 154623.6945 161761.9206 150281.9096 0.982402946 1.109718865 1.153560233 1.181079175 0.935432514 1.265779146 1.010152996 1.028890935 1.07638984 1 17.19731183 GSLQAHDT(ph)SSLPTVIMR ddPTM_A459_MK2206_30min_R2 1 GSLQAHDTSSLPTVIMR 17 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73 Q12802-4 AKAP13 A-kinase anchor protein 13 1 GSLQAHDT(0.763)S(0.047)S(0.189)LPTVIMR 100.45 0.010246 2502700 13452 19507 16037 19818 17063 16713 17296 14157 15015 16343 TRUE FALSE 14481.89546 18538.31075 16571.66558 18198.80601 16393.02089 17349.02493 15025.01442 16007.36851 16320.97756 15809.72925 0.916011605 1.172588756 1.048194141 1.151114337 1.036894474 1.097363823 0.950365069 1.012501116 1.032337575 1 13.94852504 -7.247836317 24.83069475 0.999842698 1.076149689 0.204527877 0.068557376 1052.622389 1921433.96 0.024735078 0.019049872 5.65E-08 7.247836317 0.076306991 GSLQAHDTS(ph)SLPTVIMR ddPTM_A459_MK2206_30min_R1 1 GSLQAHDTSSLPTVIMR 17 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73 Q12802-4 AKAP13 A-kinase anchor protein 13 1 GSLQAHDT(0.031)S(0.483)S(0.483)LPT(0.003)VIMR 115.38 0.0011001 18437000 4784.1 2839.6 3107.6 2275.2 4028.4 3877.4 3901.1 3436.5 2254.7 2307.4 TRUE FALSE 4377.187173 2654.741524 2896.66477 2450.436298 3867.940298 4096.935037 3640.864737 3406.455043 2489.084134 2593.258132 1.687910324 1.023708936 1.11699824 0.944925716 1.49153694 1.579840814 1.40397313 1.313581167 0.959828913 1 11.3405501 -8.259801487 23.87084238 0.979914404 1.308280331 0.26498045 0.226060917 112.3050168 1636874.726 0.183633721 0.061006922 5.50E-09 8.259801487 0.328365927 GSLQAHDTS(ph)SLPTVIMR ddPTM_A459_MK2206_30min_R2 2 GSLQAHDTSSLPTVIMR 17 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73 Q12802-4 AKAP13 A-kinase anchor protein 13 1 GSLQAHDTS(0.498)S(0.498)LPT(0.005)VIMR;GSLQAHDT(0.116)S(0.763)S(0.116)LPT(0.005)VIMR 204.63 1.09E-08 12670900 37813 54663 39318 59602 58383 75316 56314 45946 54376 37125 TRUE FALSE 40707.99235 51948.51491 40628.8425 54732.32594 56090.59007 78182.20316 48919.90415 51951.29996 59105.52619 35913.61429 1.133497509 1.446485293 1.131293614 1.523999381 1.561819694 2.176951685 1.362154857 1.446562842 1.645769365 1 15.13224323 -5.871899385 6.059507232 1.574866489 1.259597598 0.169050851 0.287719694 0.342091011 16.92826138 0.080459849 0.120851105 1.34E-06 5.871899385 -0.315268891 GSLQAHDTSS(ph)LPTVIMR ddPTM_A459_MK2206_30min_R1 1 GSLQAHDTSSLPTVIMR 17 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73 Q12802-4 AKAP13 A-kinase anchor protein 13 1 GSLQAHDT(0.021)S(0.159)S(0.703)LPT(0.117)VIMR 157.14 2.82E-05 22274000 7232.2 3100.2 3423.4 2476 5739.7 5562.5 5602.4 4679.2 3069.9 3038.9 TRUE FALSE 6617.063412 2898.376417 3191.029146 2666.701949 5511.075595 5877.443943 5228.674118 4638.290248 3389.027091 3415.381875 1.937430031 0.848624407 0.934311085 0.780791738 1.61360451 1.720874608 1.530919326 1.358059045 0.992283503 1 11.73783118 -6.273974329 24.8315121 1.412853784 1.091886215 0.083455664 0.373520775 1438.475768 2849589.203 0.117499166 0.134144879 5.32E-07 6.273974329 -0.320967569 GSLQAHDTSS(ph)LPTVIMR ddPTM_A459_MK2206_30min_R2 1 GSLQAHDTSSLPTVIMR 17 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73 Q12802-4 AKAP13 A-kinase anchor protein 13 1 GSLQAHDTS(0.267)S(0.721)LPT(0.012)VIMR 157.57 2.68E-05 7059000 26189 33909 24101 34106 37496 44307 34726 26333 35443 20832 TRUE FALSE 28194.04998 32225.12837 24904.51531 31319.4307 36023.71864 45993.13393 30166.43449 29774.81351 38525.76807 20152.25355 1.399051968 1.599083115 1.235817883 1.554140366 1.78757768 2.282282417 1.496926109 1.477492998 1.911734982 1 14.29865356 -6.002467738 23.98686527 1.703021033 1.42424166 0.096809123 0.322573906 121.8720034 1184671.91 0.090402896 0.131377576 9.94E-07 6.002467738 -0.278779373 GSLS(ph)PAR ddPTM_A459_MK2206_30min_R1 1 GSLSPAR 7 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 GS(0.002)LS(0.998)PAR 112.11 0.027173 7950200 7680.2 7266 6289.3 6365.9 6051.8 6012 7020.2 6516.4 2097.1 4969.3 TRUE FALSE 7026.95866 6792.982079 5862.399839 6856.202721 5810.743991 6352.394245 6551.895267 6459.427802 2315.10105 5584.9344 1.258198961 1.216304721 1.049681056 1.227624575 1.040431915 1.137416089 1.173137372 1.156580783 0.414526095 1 12.44732462 -8.234262878 24.75552101 0.707263095 1.154090785 0.600133794 0.146960172 339.9806593 309694.9744 0.090354599 0.034130745 5.83E-09 8.234262878 0.44682769 GSLSLS(ph)PPLNK ddPTM_A459_MK2206_30min_R2 1 GSLSLSPPLNK 11 0 Q9H7X7-3;Q9H7X7-2;Q9H7X7 Q9H7X7-3 IFT22 Intraflagellar transport protein 22 homolog 1 GSLS(0.015)LS(0.985)PPLNK 123.95 0.0037145 7145500 105000 80584 75258 87720 78180 76361 103960 82775 61557 102080 TRUE FALSE 113038.8807 76582.31574 77767.06416 80552.9954 75110.26038 79266.97136 90309.92712 93593.97671 66911.11659 98749.13796 1.144707519 0.775523891 0.787521448 0.815733657 0.760616871 0.802710515 0.914538891 0.94779538 0.677586843 1 16.59148053 -10.2882468 21.46263754 1 0.84366605 0.121053405 0.122973354 0 0 0.115318559 0.027968859 5.15E-11 10.2882468 -0.15633395 GSLTLHER ddPTM_A459_MK2206_30min_R1 2 GSLTLHER 8 0 P17041 P17041 ZNF32 Zinc finger protein 32 0 ; 91.318 0.037982 3401000 3087.5 2753.4 3089.4 2901.6 2547.6 2895.6 3900.6 3337.6 2070.13 2527.2 FALSE TRUE 2824.891912 2574.15316 2879.700136 3125.081735 2446.123697 3059.54637 3640.398091 3308.419715 2285.327422 2840.288615 0.994579176 0.906299855 1.013875886 1.100269078 0.861223639 1.07719559 1.281700061 1.164818145 0.804610985 1 11.47182182 -6.966118916 24.8929592 1.091221611 0.979380277 0.093530528 0.129422686 357.1668396 262414.9351 0.046446861 0.040962057 1.08E-07 6.966118916 -0.111841334 GSNMDFREPTEEER ddPTM_A459_MK2206_30min_R1 1 GSNMDFREPTEEER 14 1 Q15056-2;Q15056 Q15056-2 EIF4H Eukaryotic translation initiation factor 4H 0 118.37 0.006676 10993000 5529.8 5496.6 5757 5700.4 6807 5809.2 5437.4 5460 3095 2122 FALSE TRUE 5059.461472 5138.770341 5366.23088 6139.445796 6535.862776 6138.111884 5074.680967 5412.263796 3416.736326 2384.88938 2.12146589 2.154720627 2.250096346 2.57431051 2.740530789 2.573751191 2.127847526 2.269398254 1.432660296 1 11.21970664 -8.36803985 1.904059398 0.990885751 2.385698639 0.842257199 0.201129511 0.131942398 0.961739421 0.215712421 0.061979038 4.29E-09 8.36803985 1.394812888 GSNMDFREPTEEER ddPTM_A459_MK2206_30min_R2 1 GSNMDFREPTEEER 14 1 Q15056-2;Q15056 Q15056-2 EIF4H Eukaryotic translation initiation factor 4H 0 94.688 0.036703 7169500 17775 34983 26392 40132 43058 36660 27996 27738 39906 29388 FALSE TRUE 19135.86767 33245.79509 27271.89611 36853.08722 41367.32657 38055.12199 24320.09157 31363.45184 43376.95175 28429.07197 0.673109122 1.169429489 0.959296038 1.296316928 1.455106471 1.338598813 0.855465546 1.103217575 1.525795559 1 14.79507938 -4.417890114 1.38567141 1.209338761 3.34E-17 0.353808848 0.20735396 3.682800611 3.285591605 0.061648644 7.947560394 3.82E-05 4.417890114 -1.209338761 GSPASPT(ph)SPSDCPPALAPR ddPTM_A459_MK2206_30min_R2 1 GSPASPTSPSDCPPALAPR 19 0 O94885;A0A087WW74 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 GS(0.005)PAS(0.354)PT(0.512)S(0.111)PS(0.017)DCPPALAPR 80.609 0.04446 0 43679 44972 32925 50156 37791 49260 39116 26658 33898 29931 TRUE FALSE 47023.09782 42738.75588 34022.70307 46058.09436 36307.13546 51134.62382 33980.02221 30142.29213 36846.38677 28954.35392 1.624042379 1.476073546 1.175046183 1.590713938 1.253943899 1.766042646 1.17357211 1.041027965 1.272568087 1 14.82149268 -7.492950556 23.27761169 1.115538758 1.462207616 0.504976108 0.174529967 244.9262816 190499.9811 0.0701191 0.047166481 3.21E-08 7.492950556 0.346668858 GSPDGS(ph)LQTGKPSAPK ddPTM_A459_MK2206_30min_R2 1 GSPDGSLQTGKPSAPK 16 1 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 "Proline-, glutamic acid- and leucine-rich protein 1" 1 GS(0.411)PDGS(0.589)LQT(0.001)GKPSAPK 76.358 0.01619 77989000 192340 177910 179120 206140 180460 151010 190760 164200 138900 217770 TRUE FALSE 207065.6983 169075.2481 185091.7714 189297.7026 173374.2337 156756.7914 165712.9829 185661.5038 150981.2709 210664.1827 0.982918385 0.802581843 0.87861054 0.898575639 0.822988661 0.744107467 0.786621535 0.881314998 0.716691698 1 17.68458552 -4.754700967 24.88063672 0.831459247 0.982918659 0.235999624 0.078318224 307.4445587 1135086.887 0.018678828 0.176733838 1.76E-05 4.754700967 0.151459412 GSPHYFS(ph)PFRPY ddPTM_A459_MK2206_30min_R1 1 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 GS(0.139)PHY(0.362)FS(0.499)PFRPY 75.02 0.027746 715900000 3805.6 2460.3 2669.4 2767.9 4468.9 3782.7 4353.6 3346 2535.3 2603.1 TRUE FALSE 3481.913736 2300.134023 2488.208565 2981.084138 4290.89425 3996.873205 4063.179288 3316.746275 2798.853508 2925.59168 1.190157109 0.786211568 0.850497553 1.018967943 1.466675708 1.366176022 1.388840184 1.133701021 0.956679473 1 11.51451271 -6.030323608 12.80232833 1.241420686 0.928001522 0.323284993 0.182712384 2.040326568 860.9777538 0.055718221 0.072752389 9.33E-07 6.030323608 -0.313419165 GSPHYFS(ph)PFRPY ddPTM_A459_MK2206_30min_R2 1 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 GS(0.063)PHYFS(0.937)PFRPY 116.58 0.0027375 66670000 24500 29136 25323 32761 40100 43184 39845 25823 28010 27329 TRUE FALSE 26375.73884 27689.14861 26167.25618 30084.3215 38525.47251 44827.39738 34613.30364 29198.15476 30446.25917 26437.25697 0.997673052 1.047353311 0.98978711 1.1379517 1.457241671 1.695614543 1.309262291 1.104432082 1.151642139 1 14.69028488 -6.025448355 5.148345077 1.313182237 1.02033855 0.306436934 0.183652646 0.233202081 17.30663267 0.059052917 0.081141409 9.43E-07 6.025448355 -0.292843687 GSPLLGPVVPGPS(ph)PIPSVTEK ddPTM_A459_MK2206_30min_R2 1 GSPLLGPVVPGPSPIPSVTEK 21 0 P49454 P49454 CENPF Centromere protein F 1 GSPLLGPVVPGPS(1)PIPSVTEK 168.62 3.47E-09 0 17868 19716 14114 14893 21242 16843 20690 14859 16037 18009 TRUE FALSE 19235.98782 18736.93211 14584.55372 13676.19426 20407.93235 17483.97217 17973.37815 16801.12232 17431.86927 17421.3678 1.104160594 1.07551441 0.837164675 0.785024139 1.171431117 1.003593539 1.031685821 0.964397429 1.000602792 1 14.08857028 -5.027029525 24.78842304 0.975016981 1.096999138 0.179802922 0.09957403 992.4187629 910137.5046 0.026856937 0.07151833 9.40E-06 5.027029525 0.121982158 GSPS(ph)PPQAEAR ddPTM_A459_MK2206_30min_R1 1 GSPSPPQAEAR 11 0 M0R0S1;M0R2P6;Q8TBC3;M0R1G0;M0QZE8;M0R0K4;M0QYB1;M0R0E3;M0R0S2;M0QZF4 M0R0S1 SHKBP1 SH3KBP1-binding protein 1 1 GS(0.005)PS(0.995)PPQAEAR 99.539 0.017157 6425200 2366.5 2449.6 2316.4 2284.7 3025.8 2263.5 2649.3 2415.7 1661.7 1783.7 TRUE FALSE 2165.216748 2290.130595 2159.169222 2460.66799 2905.275979 2391.657414 2472.570031 2394.57979 1834.439661 2004.678222 1.080081942 1.142393113 1.077065236 1.227462823 1.449248037 1.193038058 1.233399956 1.194495836 0.915079358 1 10.96915497 -8.253392719 23.03509202 0.957539664 1.203805435 0.482036201 0.100313509 166.7303547 477307.7945 0.077076749 0.027835334 5.58E-09 8.253392719 0.246265771 GSPS(ph)PPQAEAR ddPTM_A459_MK2206_30min_R2 2 GSPSPPQAEAR 11 0 M0R0S1;M0R2P6;Q8TBC3;M0R1G0;M0QZE8;M0R0K4;M0QYB1;M0R0E3;M0R0S2;M0QZF4 M0R0S1 SHKBP1 SH3KBP1-binding protein 1 1 GS(0.078)PS(0.922)PPQAEAR;GS(0.249)PS(0.751)PPQAEAR 115.34 0.0062052 17525100 61992 85643 72822 88837 84209 93516 78933 63917 87853 72784 TRUE FALSE 66738.15518 81390.09316 75249.84913 81578.73292 80902.53154 97074.81691 68569.00228 72271.17136 95494.29514 70409.06404 0.947863121 1.155960447 1.0687523 1.158639644 1.149035748 1.378726137 0.973866124 1.026446983 1.356278434 1 16.10347354 -4.759007946 24.82750182 1.142455771 0.947862845 0.164907215 0.130245065 111.5315664 1138587.404 0.031625082 0.207164871 1.74E-05 4.759007946 -0.194592926 GSPS(ph)VAASSPPAIPK ddPTM_A459_MK2206_30min_R2 1 GSPSVAASSPPAIPK 15 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 GSPS(0.474)VAAS(0.076)S(0.451)PPAIPK 166.86 7.67E-05 17662000 104150 112390 108500 127910 119390 107850 127980 104080 108500 120270 TRUE FALSE 112123.8041 106808.876 112117.3358 117459.3438 114702.1487 111954.3073 111176.0723 117683.6134 117937.1339 116345.5997 0.963713319 0.918031075 0.963657724 1.009572722 0.985874403 0.96225648 0.955567486 1.011500337 1.013679367 1 16.82805712 -2.863410098 0.229693638 1.006596977 0.786597289 0.367839243 0.0234433 32.00519716 0.712246796 0.038901503 2.330063361 0.001369588 2.863410098 -0.219999687 GSPSQEWVIHAS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 GSPSQEWVIHASPVK 15 0 Q5T7B8;Q5T7B8-2;Q5T7B8-4 Q5T7B8 KIF24 Kinesin-like protein KIF24 1 GSPSQEWVIHAS(1)PVK;GSPSQEWVIHAS(1)PVK 115.53 0.0015634 6718600 48525 44951 52051 48867 52205 43619 56648 46660 40035 53743 TRUE FALSE 52240.11131 42718.7987 53786.35436 44874.40978 50155.16939 45278.95161 49210.04955 52758.62221 43517.17193 51989.37031 1.004822928 0.821683326 1.034564451 0.863145861 0.964719693 0.870927102 0.946540596 1.01479633 0.837039796 1 15.66592906 -10.91696876 2.99998108 1.001074446 0.92914993 0.078737357 0.073158292 54108198.59 69648642.88 507586.7886 0.016245489 1.21E-11 10.91696876 -0.071924516 GSPSS(ph)HLLGADHGLR ddPTM_A459_MK2206_30min_R1 1 GSPSSHLLGADHGLR 15 0 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 GS(0.162)PS(0.162)S(0.676)HLLGADHGLR 112.62 0.0029624 6266100 1334.9 1299 1365.9 1295 1432.6 1080.4 1453.1 1337 1203.6 1095.8 TRUE FALSE 1221.359745 1214.434864 1273.186514 1394.741124 1375.536508 1141.571314 1356.16635 1325.31075 1328.718527 1231.555977 0.991720854 0.986097982 1.033803203 1.132503232 1.11690945 0.926934168 1.10118125 1.07612709 1.07889414 1 10.26626649 -5.439698518 4.57885717 1.064543956 0.990790635 0.202769497 0.056819897 0.34259293 12.65400791 0.015436706 0.033058861 3.63E-06 5.439698518 -0.073753321 GSPSS(ph)PAGSTPAIPK ddPTM_A459_MK2206_30min_R2 1 GSPSSPAGSTPAIPK 15 0 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 GS(0.001)PS(0.06)S(0.928)PAGS(0.01)TPAIPK 151.66 0.00024204 10145000 57571 67753 56606 68455 63787 56873 73369 54577 46557 65704 TRUE FALSE 61978.68002 64388.48454 58493.21579 62862.00752 61282.40188 59037.34187 63735.56217 61710.40129 50606.4437 63560.08386 0.975119545 1.013033348 0.920282231 0.989017064 0.9641649 0.928843046 1.002760826 0.970898676 0.796198504 1 15.95583341 GSPSVAAS(ph)SPPAIPK ddPTM_A459_MK2206_30min_R2 2 GSPSVAASSPPAIPK 15 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 GSPSVAAS(0.63)S(0.37)PPAIPK;GSPSVAAS(0.597)S(0.403)PPAIPK 193.51 3.12E-05 8268300 57974 61789 61294 64372 57059 51499 63369 53673 52597 58304 TRUE FALSE 62412.53401 58720.64811 63337.51137 59112.60168 54818.57696 53458.83053 55048.57418 60688.24539 57171.79199 56401.54525 1.106574895 1.041117718 1.122974753 1.048067059 0.971933955 0.947825637 0.976011808 1.076003239 1.013656483 1 15.78344707 -6.029611563 5.362174267 0.998384723 1.085725349 0.557031741 0.037222957 0.156755568 12.76996753 0.011884991 0.016195328 9.34E-07 6.029611563 0.087340626 GSPSVAASS(ph)PPAIPK ddPTM_A459_MK2206_30min_R2 1 GSPSVAASSPPAIPK 15 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 GSPSVAAS(0.152)S(0.848)PPAIPK 169.94 5.59E-05 18124000 103100 121450 101400 117730 117950 107930 117740 87806 101490 106900 TRUE FALSE 110993.4153 115418.9696 104780.6254 108111.0824 113318.6903 112037.3518 102280.5966 99282.54568 110317.4167 103411.8618 1.073314157 1.11610958 1.013236041 1.045441795 1.095799732 1.083409097 0.989060586 0.960069222 1.066777204 1 16.65804215 -7.262061334 24.998918 1.000649186 1.070569017 0.454733108 0.035994095 51.70452043 2078139.439 0.014727732 0.010585678 5.47E-08 7.262061334 0.069919831 GSPTDAEGS(ph)PGLSR ddPTM_A459_MK2206_30min_R1 3 GSPTDAEGSPGLSR 14 0 Q8TER5;Q8TER5-4;Q8TER5-3;G3V485;G3V3N2;G3V5C1 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 GSPT(0.01)DAEGS(0.977)PGLS(0.013)R;GSPTDAEGS(1)PGLSR;GSPTDAEGS(1)PGLSR 238.67 1.96E-19 30957000 7311.4 6382.4 6212.2 5676 8068.8 5963.7 7653 8238.4 6442.6 7246.6 TRUE FALSE 6689.527036 5966.9046 5790.533172 6113.166503 7747.40261 6301.35954 7142.482334 8166.372537 7112.331325 8144.363517 0.821368916 0.732642224 0.710986581 0.75060089 0.951259432 0.773708041 0.876984717 1.002702362 0.873282646 1 12.99158624 -7.075001455 0.562367416 0.98077337 0.740574368 0.561076782 0.068516614 0.651169349 0.435063741 0.062429642 0.056866399 8.41E-08 7.075001455 -0.240199002 GSPTDAEGS(ph)PGLSR ddPTM_A459_MK2206_30min_R2 2 GSPTDAEGSPGLSR 14 0 Q8TER5;Q8TER5-4;Q8TER5-3;G3V485;G3V3N2;G3V5C1 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 GSPTDAEGS(1)PGLSR;GSPT(0.001)DAEGS(0.996)PGLS(0.004)R 164.7 0.00025862 27777000 52684 61360 58172 69310 57364 67255 57491 56618 61789 61025 TRUE FALSE 56717.52755 58312.95163 60111.42545 63647.15129 55111.60113 69814.43615 49942.36264 64018.167 67163.29553 59033.75925 0.960764286 0.987789908 1.018255083 1.07814837 0.93356076 1.182618845 0.845996651 1.084433175 1.137709954 1 15.84925259 -5.173278499 2.338288288 1.035391304 0.963363074 0.070935762 0.091667951 0.983847341 9.777022864 0.024110806 0.100567757 6.71E-06 5.173278499 -0.07202823 GSPVSSPQNS(ph)PGTQR ddPTM_A459_MK2206_30min_R1 1 GSPVSSPQNSPGTQR 15 0 A0A2R8Y6F3;Q9P2P5;A0A2R8YE75 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 GSPVSSPQNS(0.904)PGT(0.096)QR 197.29 6.04E-21 0 624.79 834.39 630.37 721.6 534.3 822.13 593.23 791.48 515.37 476.46 TRUE FALSE 571.6483296 780.0710593 587.5822407 777.177757 513.0176996 868.6782901 553.6567091 784.5601738 568.9445558 535.4874619 1.067528878 1.456749438 1.097284778 1.45134632 0.958038677 1.622219663 1.033930294 1.465132668 1.062479696 1 9.064708985 -8.465894795 9.129992401 1.000037329 1.269099133 0.169202111 0.213018672 0.578116052 87.76503076 0.181730223 0.046948778 3.42E-09 8.465894795 0.269061804 GSPVSSPQNS(ph)PGTQR ddPTM_A459_MK2206_30min_R2 1 GSPVSSPQNSPGTQR 15 0 A0A2R8Y6F3;Q9P2P5;A0A2R8YE75 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 GSPVSSPQNS(0.845)PGT(0.155)QR 205.12 3.17E-29 0 4300.1 7011.3 5252.4 5332.7 5695.2 6824.9 5554.7 4725.9 5021.2 4098.9 TRUE FALSE 4629.318962 6663.129037 5427.512394 4897.001352 5471.577832 7084.626352 4825.361218 5343.591356 5457.9349 3965.153229 1.167500648 1.680421576 1.368802687 1.23500936 1.379915861 1.786721961 1.216941929 1.347638048 1.376475154 1 11.9531609 -9.380696807 0.723178524 0.989026247 1.418084971 0.291190858 0.186029226 4.698980123 2.965221712 0.324686179 0.066417806 4.16E-10 9.380696807 0.429058725 GSPVSSPQNSPGT(ph)QR ddPTM_A459_MK2206_30min_R2 1 GSPVSSPQNSPGTQR 15 0 A0A2R8Y6F3;Q9P2P5;A0A2R8YE75 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 GSPVSSPQNS(0.071)PGT(0.929)QR 153.92 0.00059809 0 4448.1 6731.7 4603.2 6026.2 4451.6 6545.1 4902.8 5560.7 6098.2 5833.5 TRUE FALSE 4788.649956 6397.413567 4756.668391 5533.840183 4276.807817 6794.178367 4259.056471 6287.502583 6628.610413 5643.153373 0.848576964 1.133659347 0.842909642 0.980629059 0.757875523 1.203968405 0.754729881 1.114182473 1.174628789 1 12.46228585 -7.882095642 23.55821935 1.108368775 0.94123434 0.209470634 0.145064577 7.019429057 1386.242244 0.073284319 0.03520466 1.31E-08 7.882095642 -0.167134435 GSQEDDPAATQRPPS(ph)NGGAK ddPTM_A459_MK2206_30min_R1 1 GSQEDDPAATQRPPSNGGAK 20 1 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 GSQEDDPAATQRPPS(1)NGGAK 97.94 0.00049882 5495000 1726.5 1623.4 1487.9 1415.3 2082.7 1553.7 2059.9 1618.5 1750.4 2151.1 TRUE FALSE 1579.652109 1517.716365 1386.905494 1524.306651 1999.741649 1641.669151 1922.487829 1604.349625 1932.360344 2417.594508 0.653398286 0.627779539 0.573671676 0.630505507 0.827161727 0.679050662 0.795206898 0.663614026 0.799290509 1 11.23935657 -14.52287875 0.102485087 2.017913545 0.486752176 0.720820872 0.064452488 99.03448455 0.68417547 21.24464662 1.038356397 3.00E-15 14.52287875 -1.531161369 GSQEDDPAATQRPPS(ph)NGGAK ddPTM_A459_MK2206_30min_R2 3 GSQEDDPAATQRPPSNGGAK 20 1 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 GSQEDDPAAT(0.046)QRPPS(0.953)NGGAK;GSQEDDPAATQRPPS(1)NGGAK;GSQEDDPAAT(0.002)QRPPS(0.998)NGGAK 83.247 0.0016421 27817600 184703 170676 178934 173036 153792 140811 186998 137856 119365 190864 TRUE FALSE 198844.0037 162200.478 184899.5703 158898.4053 147753.3533 146169.6613 162444.938 155874.2525 129747.1519 184636.1233 1.076950708 0.878487238 1.001426844 0.86060302 0.800240769 0.791663401 0.879811247 0.844224032 0.702718133 1 17.49432531 -5.863384377 4.678005857 0.828800983 0.974635151 0.383738063 0.084204813 0.212553254 7.861773791 0.022757136 0.034854793 1.37E-06 5.863384377 0.145834168 GSQPPPAAESQSS(ph)LRR ddPTM_A459_MK2206_30min_R1 2 GSQPPPAAESQSSLRR 16 1 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 GSQPPPAAES(0.025)QS(0.081)S(0.894)LRR;GSQPPPAAESQS(0.036)S(0.964)LRR 180.93 1.78E-06 6741600 2432.1 1921.25 1605.87 1192 1530.08 1666.29 1824.56 1561.89 1766.06 2423.3 TRUE FALSE 2225.237124 1796.176276 1496.868019 1283.808047 1469.133674 1760.6339 1702.846931 1548.23456 1949.648257 2723.516699 0.817045522 0.659506247 0.549608533 0.471378805 0.539425249 0.646456069 0.625238293 0.568468907 0.715856913 1 11.411255 -8.652031826 3.071619589 0.999888908 0.604600801 0.642866243 0.087718173 0.363146258 6.923305279 0.090589652 0.024066387 2.23E-09 8.652031826 -0.395288107 GSQPPPAAESQSS(ph)LRR ddPTM_A459_MK2206_30min_R2 2 GSQPPPAAESQSSLRR 16 1 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 GSQPPPAAES(0.203)QS(0.203)S(0.594)LRR;GSQPPPAAES(0.272)QS(0.161)S(0.567)LRR 104.81 0.0019389 12935600 38997 30855 24308 28852 17570.1 22674 25953 19280.4 20609.1 23948 TRUE FALSE 41982.6403 29322.78557 25118.41659 26494.69931 16880.20959 23536.87496 22545.33992 21800.41448 22401.64227 23166.57872 1.81220718 1.265736556 1.084252314 1.143660427 0.728644907 1.015984071 0.973183835 0.941028658 0.966981035 1 14.49975738 -2.988564065 0.80961248 0.94776014 16.95679859 0.884386003 0.093143714 11.45993748 0.511945129 0.032663314 298.1650249 0.001026682 2.988564065 16.00903845 GSRPPLILQSQSLPCS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 GSRPPLILQSQSLPCSSPR 19 1 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 GSRPPLILQS(0.003)QS(0.039)LPCS(0.801)S(0.156)PR 84.895 0.018595 7966400 1886.2 1340 1430.6 1432.8 1965.7 1620.7 1510 1569.9 1337.1 1415.1 TRUE FALSE 1725.768785 1252.765756 1333.494858 1543.154504 1887.402007 1712.462633 1409.270655 1556.17453 1476.09633 1590.413271 1.085107133 0.787698254 0.83845808 0.970285228 1.186736832 1.076740659 0.88610343 0.978471796 0.928121235 1 10.63518599 -4.460953179 22.4558629 0.963748444 4.068197579 0.104139043 0.10865272 987.2702987 388384.4466 0.028957455 12919.29338 3.46E-05 4.460953179 3.104449135 GSRPPLILQSQSLPCS(ph)SPR ddPTM_A459_MK2206_30min_R2 1 GSRPPLILQSQSLPCSSPR 19 1 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 GSRPPLILQSQSLPCS(0.5)S(0.5)PR 108.97 0.00039409 42392000 51669 40217 46635 49009 49473 63961 49077 32104 37695 52801 TRUE FALSE 55624.81837 38219.88226 48189.78762 45004.80793 47530.44144 66395.08067 42633.13095 36300.10303 40973.64296 51078.10769 1.089014861 0.748263473 0.943452876 0.881097792 0.93054429 1.29987354 0.834665434 0.710678306 0.802176212 1 15.64041746 -7.494218032 24.99778153 0.80839058 0.97144324 0.171678786 0.151134946 1146.482606 999961.3133 0.064318687 0.04326666 3.20E-08 7.494218032 0.16305266 GSRPPLILQSQSLPCSS(ph)PR ddPTM_A459_MK2206_30min_R1 1 GSRPPLILQSQSLPCSSPR 19 1 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 GSRPPLILQSQSLPCS(0.245)S(0.755)PR 149.18 1.80E-05 30061000 1473 1311.2 1396 1041.7 1524.9 1194.1 1231.8 969.77 1106.9 1073.9 TRUE FALSE 1347.713615 1225.840642 1301.243409 1121.931914 1464.160004 1261.70891 1149.62887 961.2914031 1221.966216 1206.94284 1.116634169 1.015657578 1.078131761 0.929565078 1.21311462 1.045375861 0.952513103 0.796468044 1.012447463 1 10.23714164 -7.286986419 4.215612249 0.92044137 1.065903125 0.329393236 0.087308307 0.229563217 9.739735104 0.036153395 0.024803765 5.16E-08 7.286986419 0.145461755 GSRPPLILQSQSLPCSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 GSRPPLILQSQSLPCSSPR 19 1 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 GSRPPLILQSQSLPCS(0.03)S(0.97)PR 171.04 4.80E-07 0 16661 17897 20323 20385 19818 19513 20476 14286 15586 18670 TRUE FALSE 17936.57897 17008.261 21000.55868 18719.48029 19039.84574 20255.58089 17787.4766 16153.22925 16941.64211 18060.79943 0.993122095 0.94172249 1.162770162 1.036470194 1.05420836 1.121521833 0.984866516 0.894380634 0.938033899 1 14.14057413 -7.512936075 14.89913243 0.937644248 1.05129347 0.381025754 0.06223917 2.468875191 3704.315829 0.028247412 0.017652598 3.07E-08 7.512936075 0.113649222 GSS(ph)DLIK ddPTM_A459_MK2206_30min_R1 1 GSSDLIK 7 0 Q96JF6 Q96JF6 ZNF594 Zinc finger protein 594 1 GS(0.046)S(0.954)DLIK 82.75 0.040577 7323400 3914.3 4583.2 3832.1 3756.3 4019.9 3275.8 4410.7 4306.2 3567.6 3612.2 TRUE FALSE 3581.36823 4284.832847 3571.987729 4045.610877 3859.778871 3461.272965 4116.470251 4268.551347 3938.464787 4059.706607 0.882174151 1.05545382 0.879863516 0.996527894 0.950753156 0.852591899 1.013982204 1.051443309 0.970135325 1 11.98715975 GSS(ph)FEMTDDDSAIR ddPTM_A459_MK2206_30min_R1 1 GSSFEMTDDDSAIR 14 0 H7BXY3;Q7L2E3-3;Q7L2E3;Q7L2E3-2 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 1 GS(0.003)S(0.996)FEMT(0.001)DDDSAIR 236.42 2.54E-19 4205000 727.21 938.18 805.76 689.76 950.14 888.11 1054.6 811.68 751.92 773.02 TRUE FALSE 665.3569708 877.1043115 751.0672562 742.8854347 912.2939118 938.3940207 984.2495582 804.5835673 830.0847748 868.7875536 0.765845422 1.009572833 0.864500479 0.855082962 1.050077097 1.080119089 1.13290016 0.926099325 0.955451964 1 9.762859625 -6.262937992 24.98595477 1.028653077 0.882791311 0.46654296 0.078437283 131.1283969 2186265.447 0.024705535 0.029539193 5.46E-07 6.262937992 -0.145861766 GSS(ph)FEMTDDDSAIR ddPTM_A459_MK2206_30min_R2 2 GSSFEMTDDDSAIR 14 0 H7BXY3;Q7L2E3-3;Q7L2E3;Q7L2E3-2 H7BXY3 DHX30 Putative ATP-dependent RNA helicase DHX30 1 GS(0.005)S(0.995)FEMTDDDSAIR;GS(0.021)S(0.979)FEMTDDDSAIR 177.93 7.09E-05 4556500 14796 16628.7 16706.6 19867.5 15472.8 22240 21563 14635.7 22097 16736.1 TRUE FALSE 15928.79314 15802.94294 17263.58971 18244.2617 14865.26013 23086.35878 18731.7522 16548.63624 24018.95712 16190.00243 0.983866013 0.976092685 1.066311743 1.126884432 0.918175287 1.425963887 1.156995021 1.02215156 1.483567234 1 13.98281558 -6.739747807 24.99954215 1.215323864 1.021293313 0.309160614 0.151874761 310.1280091 357421.789 0.048302347 0.048261487 1.82E-07 6.739747807 -0.194030551 GSS(ph)FQSGR ddPTM_A459_MK2206_30min_R2 1 GSSFQSGR 8 0 Q96KP1 Q96KP1 EXOC2 Exocyst complex component 2 1 GS(0.004)S(0.996)FQSGR 119.34 0.0079276 42560000 107830 104300 100350 122890 124960 111650 131920 118780 106590 110900 TRUE FALSE 116085.5477 99120.61367 103695.6189 112849.4939 120053.4425 115898.919 114598.7455 134304.9538 115861.0055 107281.3421 1.082066513 0.923931522 0.966576451 1.051902332 1.119052392 1.080326893 1.068207605 1.251894796 1.079973491 1 16.71103966 -5.99261362 3.350169445 1.10945218 0.984775688 0.318004262 0.070330547 0.25175213 5.948135115 0.020821776 0.030625655 1.02E-06 5.99261362 -0.124676492 GSS(ph)GCSEAGGAGHEEGR ddPTM_A459_MK2206_30min_R2 1 GSSGCSEAGGAGHEEGR 17 0 Q9C0C9 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 GS(0.211)S(0.788)GCS(0.001)EAGGAGHEEGR 131.98 0.00049113 2577200 2402.8 2772.1 3033.5 3145 2254 2764.7 2402 2950.8 4314.3 3133 TRUE FALSE 2586.760215 2634.441545 3134.635376 2888.04344 2165.496635 2869.912596 2086.614515 3336.479692 4689.550016 3030.770467 0.853499215 0.869231627 1.034270134 0.952907345 0.714503674 0.94692509 0.68847659 1.100868485 1.547312826 1 11.56546888 -7.991859619 9.800805886 1.290662411 0.874334721 0.52732272 0.157458419 0.107549373 109.1178931 0.084022016 0.038832966 1.02E-08 7.991859619 -0.41632769 GSS(ph)GNASEVSVACLTER ddPTM_A459_MK2206_30min_R2 1 GSSGNASEVSVACLTER 17 0 F8WAN1;Q69YQ0-2;Q69YQ0;A0A494C1J1;C9J8U1 F8WAN1 SPECC1L-ADORA2A;SPECC1L Cytospin-A 1 GS(0.348)S(0.652)GNASEVSVACLTER 76.868 0.02052 3128000 9559 11232 11357 11337 12760 13718 11076 10197 9090.7 10495 TRUE FALSE 10290.84439 10674.23521 11735.63671 10410.73083 12258.97829 14240.0481 9621.707895 11529.78291 9881.392654 10152.54901 1.01362174 1.051384751 1.155930072 1.025430247 1.207477873 1.402608162 0.947713514 1.135654002 0.973291795 1 13.30955437 -8.01507098 1.616406062 0.993404261 1.128757645 0.14407671 0.121121612 0.822833898 3.85264098 0.110971395 0.036635327 9.66E-09 8.01507098 0.135353384 GSS(ph)GSPAHAESYSSGGGGQQK ddPTM_A459_MK2206_30min_R1 3 GSSGSPAHAESYSSGGGGQQK 21 0 P15408 P15408 FOSL2 Fos-related antigen 2 1 GS(0.121)S(0.51)GS(0.369)PAHAESYSSGGGGQQK;GS(0.12)S(0.513)GS(0.368)PAHAESYSSGGGGQQK;GS(0.096)S(0.526)GS(0.378)PAHAESYSSGGGGQQK 160.98 5.89E-08 29314700 16568.4 7977.2 10595.4 7245 18766.2 18002.8 17411.9 13940.2 8875.1 8935.6 TRUE FALSE 15159.17058 7457.88283 9876.213768 7803.011155 18018.70252 19022.10298 16250.38392 13818.3223 9797.698405 10042.60959 1.509485203 0.742623993 0.983431018 0.776990391 1.794225132 1.894139448 1.618143549 1.375969282 0.975612795 1 13.29384658 -6.254891865 24.99473407 1.493126146 0.983117628 0.276896228 0.341937058 640.214252 2443977.052 0.104866358 0.132148814 5.56E-07 6.254891865 -0.510008518 GSS(ph)GSPAHAESYSSGGGGQQK ddPTM_A459_MK2206_30min_R2 2 GSSGSPAHAESYSSGGGGQQK 21 0 P15408 P15408 FOSL2 Fos-related antigen 2 1 GS(0.095)S(0.453)GS(0.453)PAHAESYSSGGGGQQK;GS(0.107)S(0.446)GS(0.446)PAHAESYSSGGGGQQK 141.5 1.04E-05 58807000 48159 81316 63684 99334 103323 99827 93447 69064 90816 76891 TRUE FALSE 51846.09007 77277.96568 65807.19277 91218.09445 99266.01986 103625.9864 81177.29665 78090.90193 98715.01152 74382.05297 0.697024188 1.03893295 0.884718694 1.22634548 1.33454262 1.393158461 1.091355958 1.049862148 1.327134807 1 16.18266695 -5.760691877 24.98315336 1.214004926 0.890095972 0.522772091 0.143811613 16.02796477 535645.4829 0.040311215 0.06487107 1.74E-06 5.760691877 -0.323908954 GSS(ph)GSVDETLFALPAASEPVIR ddPTM_A459_MK2206_30min_R1 2 GSSGSVDETLFALPAASEPVIR 22 0 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 GS(0.377)S(0.623)GSVDETLFALPAASEPVIR;GS(0.389)S(0.611)GSVDETLFALPAASEPVIR 274.82 6.38E-66 12153000 912.81 1047.69 796.95 1022.01 970.18 696.31 1163.36 826.33 898.92 909.9 TRUE FALSE 835.1707161 979.4851906 742.8552544 1100.725387 931.5356762 735.7344705 1085.754377 819.1054839 992.3659508 1022.625281 0.816692811 0.957814371 0.726419802 1.076372164 0.910925725 0.719456563 1.061732383 0.800983018 0.970410148 1 9.998061883 -14.52287871 0.143641267 1.382448484 0.856440943 0.086343914 0.118998172 386.4670607 3.351428975 41.96075376 0.651978406 3.00E-15 14.52287871 -0.526007541 GSS(ph)LSGTDDGAQEVVK ddPTM_A459_MK2206_30min_R2 1 GSSLSGTDDGAQEVVK 16 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 GS(0.008)S(0.955)LS(0.037)GTDDGAQEVVK 177.07 6.41E-09 0 58232 51368 57708 61231 47135 63644 64317 50463 57580 60514 TRUE FALSE 62690.28669 48817.13982 59631.95592 56228.23143 45284.24307 66066.01702 55872.10064 57058.68737 62588.20432 58539.43314 1.070906965 0.833918902 1.018663023 0.960518892 0.773568185 1.128572886 0.954435287 0.974705157 1.069163143 1 15.83712116 -6.784101048 24.99977982 1.019360536 0.932545886 0.207637819 0.091288319 416.3772268 459333.7025 0.03109354 0.027440978 1.64E-07 6.784101048 -0.08681465 GSS(ph)PGPRPVEGTPASR ddPTM_A459_MK2206_30min_R2 1 GSSPGPRPVEGTPASR 16 1 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 GS(0.148)S(0.852)PGPRPVEGTPASR 107.82 0.015434 24617000 10654 11402 8458.7 13557 12284 11130 14865 9347.9 12614 10848 TRUE FALSE 11469.67843 10835.79326 8740.708836 12449.34973 11801.66844 11553.55995 12913.20764 10569.70263 13711.14292 10494.03065 1.092971692 1.032567335 0.832921985 1.186326794 1.124607773 1.100964952 1.230528867 1.007210955 1.306565931 1 13.35728129 -5.794893724 24.9999941 1.138830377 0.99079459 0.293563877 0.106837424 217.9971193 162905.5352 0.02850067 0.042276216 1.60E-06 5.794893724 -0.148035787 GSS(ph)PLPTATTPKPLIPTEASIR ddPTM_A459_MK2206_30min_R1 1 GSSPLPTATTPKPLIPTEASIR 22 1 Q9BUK6-2;Q9BUK6;A0A3B3IUD2;Q9BUK6-7;Q9BUK6-3 Q9BUK6-2 MSTO1 Protein misato homolog 1 1 GS(0.231)S(0.769)PLPTATTPKPLIPTEASIR 79.845 0.00068877 16471000 1282.3 1334.7 1382.6 1139.5 1682.3 1453.9 1621.7 1531.2 958.74 1248.1 TRUE FALSE 1173.233651 1247.810787 1288.752964 1227.264487 1615.290429 1536.218562 1513.519352 1517.81288 1058.404454 1402.724051 0.836396618 0.889562553 0.918750173 0.874915125 1.151538271 1.095168049 1.078985814 1.082046664 0.754535044 1 10.45401551 -6.231234548 24.32107782 1.037151108 0.883370392 0.328136015 0.102487216 591.7928927 476514.0478 0.03070784 0.03963715 5.87E-07 6.231234548 -0.153780716 GSS(ph)PLPTATTPKPLIPTEASIR ddPTM_A459_MK2206_30min_R2 1 GSSPLPTATTPKPLIPTEASIR 22 1 Q9BUK6-2;Q9BUK6;A0A3B3IUD2;Q9BUK6-7;Q9BUK6-3 Q9BUK6-2 MSTO1 Protein misato homolog 1 1 GS(0.238)S(0.76)PLPT(0.001)ATTPKPLIPTEASIR 50.189 0.029567 10870000 13533 17529 16977 15752 14468 13986 16330 9268.2 13095 15173 TRUE FALSE 14569.09689 16658.53535 17543.00471 14465.01121 13899.91362 14518.24703 14185.85138 10479.58556 14233.97943 14677.90625 0.99258686 1.134939484 1.195198035 0.985495544 0.946995667 0.98912248 0.966476495 0.713970057 0.96975544 1 13.84135857 -5.951538875 5.044220224 0.924611774 1.10996696 0.434630876 0.089677263 0.181034994 10.24109268 0.026707331 0.039761193 1.12E-06 5.951538875 0.185355186 GSS(ph)PQNTTTPK ddPTM_A459_MK2206_30min_R2 3 GSSPQNTTTPK 11 0 Q27J81-2;Q27J81 Q27J81-2 INF2 Inverted formin-2 1 GS(0.127)S(0.873)PQNTTTPK;GS(0.315)S(0.685)PQNTTTPK;GS(0.29)S(0.71)PQNTTTPK 114.87 0.0063424 5295200 105174 78011 81376 83745 70055 63878 94353 70005 56298 92145 TRUE FALSE 113226.2023 74137.08718 84089.03522 76902.76561 67304.2887 66308.92205 81964.33776 79154.89386 61194.69828 89138.3162 1.270230437 0.831708409 0.943354539 0.862735229 0.755054522 0.743887981 0.919518578 0.888000775 0.686513958 1 16.44375809 GSS(ph)PQNTTTPKPSVEGQQPAAAAACEPVDHAQSESILK ddPTM_A459_MK2206_30min_R1 1 GSSPQNTTTPKPSVEGQQPAAAAACEPVDHAQSESILK 38 1 Q27J81-2;Q27J81 Q27J81-2 INF2 Inverted formin-2 1 GS(0.292)S(0.566)PQNT(0.047)T(0.047)T(0.047)PKPSVEGQQPAAAAACEPVDHAQSESILK 154.25 1.52E-37 20028000 1499.4 1089.1 1364.6 1186 1356.5 1178.1 1230 1231.7 972.64 787.72 TRUE FALSE 1371.868156 1018.199392 1271.974754 1277.345925 1302.467733 1244.803004 1147.948944 1220.931377 1073.749409 885.3087006 1.54959299 1.150106614 1.436758447 1.442825451 1.471201776 1.406066611 1.296665156 1.379102426 1.212853108 1 9.79003679 -8.647361599 1.052951752 0.998750183 1.397429183 0.599798285 0.101292569 0.472372068 1.10055154 0.094862248 0.030616251 2.25E-09 8.647361599 0.398679 GSS(ph)PQNTTTPKPSVEGQQPAAAAACEPVDHAQSESILK ddPTM_A459_MK2206_30min_R2 2 GSSPQNTTTPKPSVEGQQPAAAAACEPVDHAQSESILK 38 1 Q27J81-2;Q27J81 Q27J81-2 INF2 Inverted formin-2 1 GS(0.23)S(0.584)PQNT(0.044)T(0.044)T(0.044)PKPS(0.055)VEGQQPAAAAACEPVDHAQSESILK;GS(0.277)S(0.315)PQNT(0.128)T(0.128)T(0.128)PKPS(0.023)VEGQQPAAAAACEPVDHAQSESILK 52.784 0.00085188 133945000 132880 181289 192303 197710 199227 153279 216570 140933 186260 209877 TRUE FALSE 143053.395 172286.4519 198714.286 181556.4606 191404.3469 159112.1398 188134.0989 159353.427 202460.5581 203028.7307 0.704596805 0.848581633 0.978749586 0.894240239 0.942745129 0.783692728 0.926637812 0.784881167 0.997201516 1 17.63132437 -14.52287875 0.017759266 2.091054995 9.70E-16 0.250819441 0.083874854 7234.66088 9.699935465 745.2579116 435.3427148 3.00E-15 14.52287875 -2.091054995 GSS(ph)PTPPCS(ph)PVQPSK ddPTM_A459_MK2206_30min_R2 1 GSSPTPPCSPVQPSK 15 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 2 GS(0.01)S(0.956)PT(0.034)PPCS(1)PVQPSK 165.89 0.0015156 10071000 41379 44810 36906 39218 37463 35293 40373 26040 32151 37967 TRUE FALSE 44547.00806 42584.80056 38136.42762 36013.76395 35992.01438 36636.09985 35071.9766 29443.51741 34947.43586 36728.1399 1.212884948 1.159459768 1.038343562 0.980549629 0.979957452 0.997494018 0.95490751 0.801661001 0.951516629 1 15.16459821 -4.727775044 0.584354936 0.921518872 1.451402959 0.762518324 0.052517018 1.90176944 0.471558378 0.028602266 0.694312537 1.87E-05 4.727775044 0.529884087 GSS(ph)PTPPCSPVQPSK ddPTM_A459_MK2206_30min_R1 4 GSSPTPPCSPVQPSK 15 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 GS(0.035)S(0.965)PTPPCSPVQPSK;GS(0.005)S(0.995)PTPPCSPVQPSK;GS(0.004)S(0.992)PT(0.004)PPCSPVQPSK;GS(0.004)S(0.996)PTPPCSPVQPSK 317.17 4.24E-97 80494300 8185.4 8687.6 7766.7 7732.9 9266.9 8393.3 9930.9 9215.3 8215 7135.9 TRUE FALSE 7489.188747 8122.035661 7239.518043 8328.489298 8897.77975 8868.521393 9268.427781 9134.731604 9068.978648 8019.949165 0.933819977 1.01272907 0.902688769 1.038471582 1.109455879 1.105807682 1.155671637 1.139001185 1.13080251 1 12.96937738 -6.043647113 3.192746653 1.115922905 0.956112633 0.677498532 0.047987974 0.134516158 2.75777434 0.013880895 0.019743821 9.04E-07 6.043647113 -0.159810272 GSS(ph)PTPPCSPVQPSK ddPTM_A459_MK2206_30min_R2 3 GSSPTPPCSPVQPSK 15 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 GS(0.305)S(0.682)PT(0.013)PPCSPVQPSK;GS(0.001)S(0.991)PT(0.008)PPCSPVQPSK;GS(0.004)S(0.996)PTPPCSPVQPSK 246.66 7.70E-28 85603000 103688 131850 127660 149558 155365 159846 167581 144650 151767 169427 TRUE FALSE 111626.433 125302.5207 131916.1207 137338.633 149264.5895 165929.0515 145577.4134 163556.2517 164967.4193 163898.6109 0.681070037 0.764512402 0.804864178 0.837948731 0.910712963 1.012388395 0.888216274 0.997911152 1.006521156 1 17.3224441 -5.315673771 0.471827248 1.003559474 0.562508813 0.896138448 0.035609296 0.909485367 0.226051563 0.026759265 0.211994719 4.83E-06 5.315673771 -0.44105066 GSS(ph)QPNLSTSHSEQEYGK ddPTM_A459_MK2206_30min_R1 2 GSSQPNLSTSHSEQEYGK 18 0 I3L2B2;O95208-3;O95208-2;O95208;F6PQP6;E9PBC1 I3L2B2 EPN2 Epsin-2 1 GS(0.175)S(0.824)QPNLSTSHSEQEYGK;GS(0.017)S(0.982)QPNLST(0.001)SHSEQEYGK 229.93 8.06E-19 33160600 9076.7 5278.15 6782.5 4875.1 11279.6 10228.7 9966.5 8373.9 5501.74 5479.44 TRUE FALSE 8304.679001 4934.541476 6322.122797 5250.581047 10830.30965 10807.84015 9301.65297 8300.687875 6073.665561 6158.274395 1.348539943 0.801286393 1.02660622 0.852605894 1.758659805 1.755011138 1.510431717 1.347891851 0.986260951 1 12.58831044 -6.246044319 24.93726402 1.434405068 0.99392913 0.30346943 0.281892731 916.7270332 1484934.475 0.085716601 0.1102529 5.67E-07 6.246044319 -0.440475938 GSS(ph)QPNLSTSHSEQEYGK ddPTM_A459_MK2206_30min_R2 2 GSSQPNLSTSHSEQEYGK 18 0 I3L2B2;O95208-3;O95208-2;O95208;F6PQP6;E9PBC1 I3L2B2 EPN2 Epsin-2 1 GS(0.179)S(0.82)QPNLS(0.001)TSHSEQEYGK;GS(0.019)S(0.981)QPNLSTSHSEQEYGK 200.45 1.61E-10 25705000 34791 69261 71488 106202 79565 84422 84965 62139 81290 71482 TRUE FALSE 37454.62571 65821.59945 73871.37424 97524.95688 76440.87832 87634.73837 73808.99344 70260.78066 88360.45726 69149.54819 0.541646716 0.951873167 1.068284265 1.410348432 1.105442918 1.267321923 1.06738215 1.016069989 1.277816841 1 16.0774322 -4.76754928 1.808371025 1.162381905 0.324821491 0.695577423 0.12339153 0.497436112 1.631074936 0.033535616 0.729231723 1.71E-05 4.76754928 -0.837560414 GSS(ph)TPTKGIENK ddPTM_A459_MK2206_30min_R2 2 GSSTPTKGIENK 12 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBE9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 GS(0.213)S(0.656)T(0.126)PT(0.006)KGIENK;GS(0.015)S(0.975)T(0.009)PTKGIENK 161.87 0.0023076 15017800 18754.5 130202 78507 112651 217090 137507 144365 60448.8 187837 56225.2 TRUE FALSE 20190.35894 123736.358 81124.3842 103447.0529 208565.9558 142739.9252 125409.7021 68349.66571 204174.7227 54390.57633 0.371210609 2.274959494 1.491515437 1.901929708 3.834597276 2.624350299 2.305724825 1.256645366 3.753862094 1 15.73106909 -4.769196438 1.187759268 2.410423011 4.14E-12 0.249817207 0.925098362 2.434866178 2.841757957 0.279427621 7.374379101 1.70E-05 4.769196438 -2.410423011 GSSAAASPGS(ph)PPPGR ddPTM_A459_MK2206_30min_R1 5 GSSAAASPGSPPPGR 15 0 Q86UX6 Q86UX6 STK32C Serine/threonine-protein kinase 32C 1 GSSAAASPGS(1)PPPGR;GSSAAASPGS(1)PPPGR;GSSAAASPGS(1)PPPGR;GSSAAAS(0.001)PGS(0.999)PPPGR;GSSAAASPGS(1)PPPGR 196.97 8.41E-06 72726000 9130.1 9256.83 9406.6 7799.29 9749.01 9017.67 10569.7 8970.27 8330.42 7482.17 TRUE FALSE 8353.537051 8654.208684 8768.1062 8399.992667 9360.686288 9528.242682 9864.614599 8891.843875 9196.39697 8409.117707 0.99339043 1.029145861 1.042690387 0.998914864 1.113159146 1.133084708 1.173085565 1.057405091 1.0936221 1 13.03773872 -6.265779591 24.97225674 1.103732262 1.018875775 0.41447397 0.045265517 340.5205887 1959251.437 0.013786198 0.016175101 5.42E-07 6.265779591 -0.084856487 GSSAAASPGS(ph)PPPGR ddPTM_A459_MK2206_30min_R2 4 GSSAAASPGSPPPGR 15 0 Q86UX6 Q86UX6 STK32C Serine/threonine-protein kinase 32C 1 GSSAAAS(0.037)PGS(0.963)PPPGR;GSSAAASPGS(1)PPPGR;GSSAAAS(0.011)PGS(0.989)PPPGR;GSS(0.001)AAAS(0.226)PGS(0.773)PPPGR 172.43 3.91E-05 50441000 37592 49268.2 43959.1 52320.9 44072.3 48373.2 52494.1 41764.1 42352.5 45993.2 TRUE FALSE 40470.07242 46821.61283 45424.67445 48046.1151 42341.80006 50214.07602 45601.56161 47222.81127 46036.24389 44492.44565 0.909594243 1.052349722 1.020952519 1.0798713 0.95166268 1.128597794 1.024928186 1.061366948 1.034697986 1 15.44127278 -4.758593781 24.95495873 1.041583157 0.909594061 0.429120518 0.044844305 68.46949048 600340.4751 0.010273089 0.06962878 1.74E-05 4.758593781 -0.131989096 GSSDGRGS(ph)DSESDLPHR ddPTM_A459_MK2206_30min_R1 2 GSSDGRGSDSESDLPHR 17 1 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46;D6RJ93;Q6NVB9;Q9UPQ0-7;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 GSSDGRGS(0.646)DS(0.222)ES(0.132)DLPHR;GSSDGRGS(0.831)DS(0.164)ES(0.005)DLPHR 130.47 0.00047225 37285000 4480.1 3410.7 3819.9 3174.7 5737.9 4660.1 4986.6 4248.5 2803.8 3058.2 TRUE FALSE 4099.043969 3188.66281 3560.615831 3419.215944 5509.347293 4923.950835 4653.953013 4211.355812 3095.265043 3437.072904 1.19259733 0.927726266 1.035944226 0.994804602 1.602918369 1.432600056 1.354045475 1.225273926 0.90055263 1 11.74696474 GSSDGRGS(ph)DSESDLPHR ddPTM_A459_MK2206_30min_R2 3 GSSDGRGSDSESDLPHR 17 1 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46;D6RJ93;Q6NVB9;Q9UPQ0-7;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 GS(0.007)S(0.007)DGRGS(0.919)DS(0.031)ES(0.036)DLPHR;GS(0.049)S(0.049)DGRGS(0.823)DS(0.077)ES(0.002)DLPHR;GS(0.019)S(0.019)DGRGS(0.404)DS(0.404)ES(0.154)DLPHR 74.698 0.012601 35648500 65725 92586 93810 111930 113955 122313 102910 95853 98080 91322 TRUE FALSE 70756.95653 87988.31387 96937.57858 102784.961 109480.5541 126967.7069 89397.79338 108381.3162 106610.8211 88342.17062 0.800942019 0.995994475 1.097296771 1.163486931 1.239278516 1.43722648 1.011949251 1.226835558 1.206794223 1 16.43081466 -4.890828313 1.193843187 1.199522194 0.670589453 0.512342156 0.116731701 1.001606872 1.390513885 0.035816986 0.630562571 1.29E-05 4.890828313 -0.52893274 GSSGCSEAGGAGHEEGRAS(ph)PLRR ddPTM_A459_MK2206_30min_R2 1 GSSGCSEAGGAGHEEGRASPLRR 23 2 Q9C0C9 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 GSSGCSEAGGAGHEEGRAS(1)PLRR 46.833 0.026619 15307000 7888.8 12920 10956 17611 16328 18656 15598 13096 12845 11238 TRUE FALSE 8492.772593 12278.41159 11321.26757 16172.12497 15686.88068 19365.96715 13549.96386 14807.69217 13962.23488 10871.30498 0.78121004 1.129433091 1.041389934 1.487597395 1.442962065 1.781383853 1.246397179 1.362089666 1.284320043 1 13.40823751 -5.694505563 5.625708833 1.401712903 0.989342332 0.426515639 0.204580732 0.184398328 10.81349752 0.05557829 0.096653849 2.02E-06 5.694505563 -0.412370571 GSSGS(ph)PAHAESYSSGGGGQQK ddPTM_A459_MK2206_30min_R1 2 GSSGSPAHAESYSSGGGGQQK 21 0 P15408 P15408 FOSL2 Fos-related antigen 2 1 GSS(0.007)GS(0.992)PAHAESYSSGGGGQQK;GS(0.009)S(0.18)GS(0.739)PAHAES(0.039)Y(0.027)S(0.005)S(0.001)GGGGQQK 308.25 6.34E-118 11177600 1033.23 249.61 759.58 534.08 1287.94 828.6 1259.31 738.22 507.81 590.83 TRUE FALSE 945.3483628 233.3603436 708.0218259 575.2149341 1236.638623 875.5146159 1175.303728 731.7658204 560.5986667 664.0264809 1.423660637 0.351432285 1.066255407 0.866253004 1.862333292 1.318493526 1.769965147 1.102013009 0.844241431 1 9.375096966 GSSGS(ph)PAHAESYSSGGGGQQK ddPTM_A459_MK2206_30min_R2 1 GSSGSPAHAESYSSGGGGQQK 21 0 P15408 P15408 FOSL2 Fos-related antigen 2 1 GS(0.001)S(0.063)GS(0.936)PAHAESYSSGGGGQQK 305.1 4.82E-102 3954900 3481.6 6375.8 5351.3 7517.3 6380.9 6134.9 6164.4 3832.8 6076.2 6142.7 TRUE FALSE 3748.153973 6059.187043 5529.709671 6903.112543 6130.353805 6368.367918 5355.006875 4333.76012 6604.696893 5942.264202 0.630761919 1.01967648 0.930572839 1.161697344 1.031652851 1.071707299 0.901172801 0.729311248 1.111478162 1 12.53679704 -4.758619769 24.98421519 0.990560061 0.630761432 0.473072018 0.115307865 73.2536502 648969.2125 0.029837536 0.201683748 1.74E-05 4.758619769 -0.359798629 GSSHS(ph)PDHPGCLMEN ddPTM_A459_MK2206_30min_R1 2 GSSHSPDHPGCLMEN 15 0 O95149 O95149 SNUPN Snurportin-1 1 GSSHS(1)PDHPGCLMEN;GSSHS(0.999)PDHPGCLMEN 109.95 0.0036195 9752600 2496.89 1606.14 1915.13 1630.34 3999.4 3582.8 3212.33 2669.76 1608.41 1643.32 TRUE FALSE 2284.516394 1501.579994 1785.136311 1755.909069 3840.095429 3785.65504 2998.041327 2646.41857 1775.609975 1846.906888 1.236941834 0.813024199 0.96655458 0.950729612 2.079203588 2.049727068 1.623276921 1.432892252 0.961396585 1 10.85089542 -6.223391142 24.60155543 1.577269329 0.977237572 0.33680261 0.361370188 514.4744424 332652.9713 0.112366489 0.145060819 5.98E-07 6.223391142 -0.600031757 GSSHS(ph)PDHPGCLMEN ddPTM_A459_MK2206_30min_R2 2 GSSHSPDHPGCLMEN 15 0 O95149 O95149 SNUPN Snurportin-1 1 GSSHS(1)PDHPGCLMEN;GS(0.003)S(0.237)HS(0.761)PDHPGCLMEN 108.23 0.0040433 15387600 33112 50425 34812 53892 49180 67300 58618 43788 49664 43870 TRUE FALSE 35647.08018 47920.96782 35972.61471 49488.85121 47248.94609 69861.14866 50921.38619 49511.24195 53983.68495 42438.52549 0.83996981 1.129185505 0.847640541 1.166130318 1.113350324 1.646172855 1.199885849 1.166657922 1.272044312 1 15.37308691 -6.053945591 2.356853122 1.262787734 0.959711546 0.342522236 0.176629451 0.329986654 3.637061539 0.055139211 0.081344412 8.83E-07 6.053945591 -0.303076188 GSSLSSESSPVSSPATNHS(ph)SPASTPK ddPTM_A459_MK2206_30min_R1 1 GSSLSSESSPVSSPATNHSSPASTPK 26 0 Q14687-3;Q14687 Q14687-3 GSE1 Genetic suppressor element 1 1 GSSLSSESSPVSSPAT(0.008)NHS(0.495)S(0.312)PAS(0.093)T(0.093)PK 147.03 6.14E-11 3661900 1202.3 787.71 985.82 742.56 1153.3 966.05 951.85 1000.8 450.26 556.6 TRUE FALSE 1100.038071 736.4299358 918.9052851 799.7520999 1107.361619 1020.746916 888.3538232 992.0501111 497.0661383 625.5558101 1.75849709 1.177240981 1.468942131 1.278466424 1.770204354 1.631743962 1.420103225 1.58586987 0.794599187 1 9.288994793 -8.260431713 24.99948184 0.897299541 1.500663515 0.635098104 0.186047662 54.95922189 1363595.91 0.142043132 0.046708418 5.49E-09 8.260431713 0.603363975 GSSLSSESSPVSSPATNHS(ph)SPASTPK ddPTM_A459_MK2206_30min_R2 2 GSSLSSESSPVSSPATNHSSPASTPK 26 0 Q14687-3;Q14687 Q14687-3 GSE1 Genetic suppressor element 1 1 GSSLSSESSPVSSPAT(0.019)NHS(0.457)S(0.457)PAS(0.026)T(0.04)PK;GSSLSSESSPVSSPAT(0.008)NHS(0.346)S(0.346)PAS(0.149)T(0.149)PK 111.88 1.07E-08 12185400 25676.4 33937.8 26306.2 38074 41948 36647 36119 22813.3 21402 24193.8 TRUE FALSE 27642.20493 32252.4982 27183.23558 34963.23241 40300.91075 38041.62726 31376.53191 25795.07664 23263.50727 23404.35829 1.181070832 1.378055224 1.16146041 1.493876994 1.721940429 1.625407832 1.340627738 1.102148426 0.993981847 1 14.51448959 -7.773473757 3.023885173 1.01162336 1.432377428 0.544057255 0.163371372 0.222446787 4.131219323 0.112272168 0.051398631 1.68E-08 7.773473757 0.420754068 GSSMGVRNS(ph)PQALR ddPTM_A459_MK2206_30min_R1 2 GSSMGVRNSPQALR 14 1 Q7L7X3;Q7L7X3-3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 GSSMGVRNS(1)PQALR;GSSMGVRNS(1)PQALR 145.46 0.0024524 18733000 4654.9 4714.9 4548.2 5665.7 6880.6 4929 4651.7 5459.5 3040.2 1578.59 TRUE FALSE 4258.976311 4407.959153 4239.480856 6102.073196 6606.531132 5208.07572 4341.393581 5411.768167 3356.239669 1774.157647 2.400562497 2.484536344 2.389573927 3.439419945 3.723756535 2.935520262 2.447016807 3.050331055 1.891737003 1 10.79291849 -8.502187605 2.876425451 1.003476949 2.86872494 0.653066393 0.435215155 0.162007529 3.154316453 0.465409038 0.124790801 3.15E-09 8.502187605 1.865247991 GSSMGVRNS(ph)PQALR ddPTM_A459_MK2206_30min_R2 1 GSSMGVRNSPQALR 14 1 Q7L7X3;Q7L7X3-3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 GSSMGVRNS(1)PQALR 68.978 0.034003 6386100 9555.1 16924 17352 36183 29046 50217 23534 10843 36065 11382 TRUE FALSE 10286.6458 16083.57877 17930.50702 33226.73316 27905.5081 52128.04312 20443.95753 12260.21733 39201.86851 11010.60627 0.93424881 1.460735074 1.628475906 3.017702417 2.534420667 4.734348122 1.856751302 1.113491576 3.560373293 1 13.42660629 -5.608432759 4.449948471 2.609590832 1.266316498 0.218032365 1.056163829 0.316964881 11.41027075 0.295120324 0.533863055 2.46E-06 5.608432759 -1.343274334 GSSPGS(ph)LEIPK ddPTM_A459_MK2206_30min_R1 1 GSSPGSLEIPK 11 0 A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 GS(0.172)S(0.11)PGS(0.718)LEIPK 136.02 0.0014496 3085900 3129.8 3068.2 2954.4 2598.9 2730.3 2604.7 2968.2 2804.5 3133.8 2909.1 TRUE FALSE 2863.594075 2868.459622 2753.863559 2799.067728 2621.546369 2752.175863 2770.196794 2779.980552 3459.569724 3269.501271 0.875850424 0.877338586 0.842288573 0.856114586 0.801818428 0.841772379 0.847284208 0.850276639 1.058133776 1 11.67485487 -8.255377885 24.94850004 1.029066896 0.848161602 0.90248169 0.023662702 119.5523784 492070.829 0.017422938 0.006211904 5.55E-09 8.255377885 -0.180905294 GSSPQNT(ph)TTPKPSVEGQQPAAAAACEPVDHAQSESILK ddPTM_A459_MK2206_30min_R1 2 GSSPQNTTTPKPSVEGQQPAAAAACEPVDHAQSESILK 38 1 Q27J81-2;Q27J81 Q27J81-2 INF2 Inverted formin-2 1 GS(0.113)S(0.093)PQNT(0.263)T(0.263)T(0.263)PKPS(0.005)VEGQQPAAAAACEPVDHAQSESILK;GS(0.002)S(0.009)PQNT(0.323)T(0.323)T(0.323)PKPS(0.019)VEGQQPAAAAACEPVDHAQSESILK 122.7 5.62E-24 36353000 3175.06 2602.35 3061.6 2600.64 3117.27 2546.43 2811.43 2762 2349.24 2336.63 TRUE FALSE 2905.004474 2432.936542 2853.787122 2800.941743 2993.102535 2690.606666 2623.884634 2737.852125 2593.451905 2626.109365 1.106200874 0.92644144 1.086697744 1.066574675 1.139747862 1.024560021 0.999152842 1.042550688 0.987564318 1 11.35871128 -6.982759519 24.94423587 1.011004766 1.061050476 0.206122503 0.053708381 450.1248435 651256.6108 0.019272505 0.016993168 1.04E-07 6.982759519 0.05004571 GSSPSHS(ph)ATSVHTSV ddPTM_A459_MK2206_30min_R1 2 GSSPSHSATSVHTSV 15 0 F8WA39;Q13613 F8WA39 MTMR1 Myotubularin-related protein 1 1 GSS(0.003)PS(0.081)HS(0.759)AT(0.141)S(0.012)VHT(0.002)S(0.002)V;GS(0.004)S(0.029)PS(0.067)HS(0.612)AT(0.248)S(0.031)VHT(0.004)S(0.004)V 98.942 0.0085555 5388300 2125.2 1183.49 1263.87 1024.19 2225.74 2680.1 2117.4 1731.42 1082.18 960.5 TRUE FALSE 1944.44058 1106.444586 1178.082026 1103.073291 2137.084063 2831.844946 1976.152109 1716.282377 1194.676484 1079.493991 1.801251879 1.024965951 1.091328007 1.021842919 1.979709086 2.623307743 1.830628169 1.589895258 1.106700448 1 10.0761395 -6.260189137 24.99910899 1.771727666 1.209604297 0.164885187 0.477093692 177.8878627 3556938.093 0.150823866 0.183950781 5.49E-07 6.260189137 -0.56212337 GSSPSIRPIQGSQGS(ph)SSPVEK ddPTM_A459_MK2206_30min_R1 1 GSSPSIRPIQGSQGSSSPVEK 21 1 Q92560;F8W6N3;H0Y8E8 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 GSSPSIRPIQGS(0.025)QGS(0.419)S(0.316)S(0.24)PVEK 68.445 0.0042511 9013800 1396.5 1356.9 1411 1148.1 1111.3 1300.8 1574.2 1432.1 1332.3 1262.5 TRUE FALSE 1277.720342 1268.565563 1315.225251 1236.526861 1067.034568 1374.450172 1469.18799 1419.579301 1470.797353 1418.908031 0.900495531 0.894043543 0.926927766 0.871463713 0.752011085 0.968667554 1.035435672 1.000473089 1.036569898 1 10.47056537 -6.987613326 24.99764932 1.015858032 0.872396904 0.715436662 0.044750173 130.548898 263460.7512 0.016555475 0.014591956 1.03E-07 6.987613326 -0.143461129 GSSPSIRPIQGSQGS(ph)SSPVEK ddPTM_A459_MK2206_30min_R2 1 GSSPSIRPIQGSQGSSSPVEK 21 1 Q92560;F8W6N3;H0Y8E8 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 GS(0.001)S(0.001)PS(0.001)IRPIQGS(0.023)QGS(0.542)S(0.216)S(0.216)PVEK 52.498 0.025317 21728000 30675 31753 27111 29831 30446 26873 37526 27730 23300 32300 TRUE FALSE 33023.50159 30176.19219 28014.86721 27393.71188 29250.53706 27895.67085 32598.79112 31354.40621 25326.59188 31246.05365 1.056885518 0.96576011 0.896588975 0.876709494 0.936135404 0.89277421 1.043293066 1.00346772 0.8105533 1 14.93138637 -10.02868355 15.31926713 0.999999899 0.942977423 0.052376128 0.073391457 0 0 0.071903806 0.017439234 9.36E-11 10.02868355 -0.057022476 GSSPSIRPIQGSQGSSS(ph)PVEK ddPTM_A459_MK2206_30min_R1 1 GSSPSIRPIQGSQGSSSPVEK 21 1 Q92560;F8W6N3;H0Y8E8 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 GSSPSIRPIQGS(0.002)QGS(0.269)S(0.269)S(0.46)PVEK 94.72 0.00024057 8356800 1724.2 2020.4 1992.9 1759.7 1718.2 1814.6 1657.9 1555.6 1975.8 2235 TRUE FALSE 1577.547736 1888.871593 1857.627501 1895.232399 1649.760456 1917.341084 1547.304516 1541.999553 2181.19148 2511.888673 0.628032505 0.751972654 0.739534168 0.754504934 0.656780881 0.763306553 0.615992473 0.613880531 0.868347194 1 11.29455681 -8.490964032 4.324130303 0.999111809 0.695967873 0.759255555 0.057159017 0.085255989 3.985197348 0.056704217 0.014822317 3.23E-09 8.490964032 -0.303143937 GSSPSIRPIQGSQGSSS(ph)PVEK ddPTM_A459_MK2206_30min_R2 1 GSSPSIRPIQGSQGSSSPVEK 21 1 Q92560;F8W6N3;H0Y8E8 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 GSSPSIRPIQGS(0.203)QGS(0.3)S(0.137)S(0.359)PVEK 62.468 0.0082504 24566000 36134 30342 31299 33819 36673 30287 35786 28551 25649 38341 TRUE FALSE 38900.44682 28835.2604 32342.49304 31055.87952 35233.03375 31439.59301 31087.25521 32282.71373 27879.90366 37089.93631 1.048814064 0.777441626 0.872001849 0.83731283 0.949935138 0.847658317 0.838158765 0.87039011 0.751683784 1 15.17874017 GSSPT(ph)PPCS(ph)PVQPSK ddPTM_A459_MK2206_30min_R2 1 GSSPTPPCSPVQPSK 15 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 2 GSS(0.007)PT(0.993)PPCS(1)PVQPSK 163.9 8.83E-05 0 24851 24222 23157 21121 19284 17926 22050 14787 19151 19081 TRUE FALSE 26753.61167 23019.1707 23929.04282 19395.34674 18526.81327 18608.18649 19154.80851 16719.71167 20816.71936 18458.38853 1.449401264 1.247084525 1.296377676 1.050760564 1.003706972 1.008115441 1.037729186 0.905805598 1.127764719 1 14.17198899 -5.645184103 1.499964734 1.005042678 1.376297642 0.81245525 0.068906581 0.165232276 0.730957648 0.020741015 0.055503133 2.26E-06 5.645184103 0.371254963 GSSPT(ph)PPCSPVQPSK ddPTM_A459_MK2206_30min_R2 1 GSSPTPPCSPVQPSK 15 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 GS(0.037)S(0.148)PT(0.624)PPCS(0.191)PVQPSK 135.61 0.0011761 0 12034 14498 11931 12987 12988 11626 10739 8330.9 8847.3 13853 TRUE FALSE 12955.33229 13778.0504 12328.77359 11925.92056 12478.02586 12068.43558 9328.9564 9419.777234 9616.822162 13400.97774 0.966745303 1.028137697 0.919990602 0.889929137 0.931128019 0.90056381 0.696139982 0.702917161 0.717620934 1 13.71005064 -7.112308789 4.457345176 0.755297398 0.944665875 0.434573661 0.088944661 0.192117212 6.196304678 0.033998892 0.026203594 7.72E-08 7.112308789 0.189368476 GSSQPNLS(ph)TSHSEQEYGK ddPTM_A459_MK2206_30min_R2 1 GSSQPNLSTSHSEQEYGK 18 0 I3L2B2;O95208-3;O95208-2;O95208;F6PQP6;E9PBC1 I3L2B2 EPN2 Epsin-2 1 GS(0.008)S(0.04)QPNLS(0.511)T(0.281)S(0.147)HS(0.012)EQEYGK 90.689 0.005652 8591000 7226 14289 12286 18161 16835 19005 18171 12543 13364 15040 TRUE FALSE 7779.228116 13579.42904 12695.60911 16677.18821 16173.97331 19728.24859 15785.12587 14182.41317 14526.37656 14549.24603 0.53468256 0.933342457 0.872595671 1.1462579 1.111670892 1.355963639 1.084944597 0.974786813 0.998428134 1 13.82865677 -4.50179541 1.039413173 1.099709271 9.65E-14 0.660925637 0.117273293 1.924800947 1.151323686 0.040100167 2.695903046 3.15E-05 4.50179541 -1.099709271 GSSQPNLSTSHS(ph)EQEYGK ddPTM_A459_MK2206_30min_R1 1 GSSQPNLSTSHSEQEYGK 18 0 I3L2B2;O95208-3;O95208-2;O95208;F6PQP6;E9PBC1 I3L2B2 EPN2 Epsin-2 1 GSSQPNLS(0.004)T(0.02)S(0.025)HS(0.942)EQEY(0.009)GK 63.979 0.023965 24658000 928.05 752.27 738.31 842.01 1053.7 1206 1176.2 829.55 806.65 689.91 TRUE FALSE 849.1144741 703.2970863 688.1955742 906.8617561 1011.728898 1274.282678 1097.737844 822.2973318 890.5041541 775.3812594 1.095092851 0.907033898 0.887557658 1.169568835 1.304814742 1.643427233 1.415739458 1.060507101 1.14847263 1 9.598762056 -5.944027811 3.987075117 1.289114593 0.959345251 0.347816147 0.180241248 0.24062657 7.913573747 0.056698531 0.085370512 1.14E-06 5.944027811 -0.329769342 GSSS(ph)QGPSQTSTPTDVTAIHL ddPTM_A459_MK2206_30min_R2 2 GSSSQGPSQTSTPTDVTAIHL 21 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 GS(0.004)S(0.025)S(0.971)QGPSQTSTPTDVTAIHL;GS(0.002)S(0.011)S(0.972)QGPS(0.015)QTSTPTDVTAIHL 263.19 7.64E-49 9655000 14259.9 15948.7 14381.1 20177.8 19881 23307.1 18990 15276.3 19575.4 19982.2 TRUE FALSE 15351.64891 15156.71075 14860.5587 18529.20919 19100.37205 24194.06802 16496.59019 17272.96486 21278.03291 19330.18245 0.794180238 0.784095587 0.76877488 0.958563596 0.988111317 1.251621297 0.853410992 0.893574849 1.100767308 1 14.23856763 -5.855959286 3.547129141 1.010658663 0.780895834 0.503679186 0.102999088 0.20533468 5.023257703 0.031116643 0.049471783 1.39E-06 5.855959286 -0.229762829 GSSSGS(ph)CSQECGEELR ddPTM_A459_MK2206_30min_R2 2 GSSSGSCSQECGEELR 16 0 J3KQ40;O95759-2;O95759 J3KQ40 TBC1D8 TBC1 domain family member 8 1 GSS(0.024)S(0.415)GS(0.561)CSQECGEELR;GSS(0.003)S(0.105)GS(0.866)CS(0.026)QECGEELR 195.17 8.32E-07 10613000 12302.1 20527.3 15651.6 17010.7 15037.8 12578.6 10542.9 11097.7 11276.1 11462.6 TRUE FALSE 13243.95823 19507.94413 16173.41653 15620.8714 14447.34041 13057.28744 9158.604566 12548.20749 12256.8748 11088.5763 1.1943786 1.759283032 1.458565653 1.408735529 1.302903098 1.177544085 0.825949546 1.131633778 1.10536055 1 13.43678652 -6.624930948 1.63968121 1.025403224 1.485826301 0.626460613 0.151520315 0.232713599 1.28813621 0.060845513 0.061638599 2.37E-07 6.624930948 0.460423077 GSSSQGPSQTS(ph)TPTDVTAIHL ddPTM_A459_MK2206_30min_R2 1 GSSSQGPSQTSTPTDVTAIHL 21 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 GSSSQGPSQT(0.022)S(0.489)T(0.489)PTDVTAIHL 227.64 9.12E-25 4768700 6983.2 9613.1 10412 9635.9 9293.6 15319 14672 11137 15935 14232 TRUE FALSE 7517.839161 9135.727433 10759.13088 8848.616146 8928.686567 15901.97528 12745.54878 12592.64414 17320.9975 13767.61101 0.546052555 0.663566644 0.781481324 0.642712533 0.648528388 1.155027933 0.925763284 0.914657171 1.258097537 1 13.74899062 -6.751637058 24.99970461 1.03756614 0.663043526 0.763859004 0.109447643 102.7888636 262150.9249 0.036294019 0.035866652 1.77E-07 6.751637058 -0.374522614 GSSSQGPSQTST(ph)PTDVTAIHL ddPTM_A459_MK2206_30min_R1 3 GSSSQGPSQTSTPTDVTAIHL 21 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 GSSSQGPSQT(0.001)S(0.017)T(0.707)PT(0.275)DVTAIHL;GSSSQGPSQT(0.001)S(0.009)T(0.904)PT(0.087)DVTAIHL;GSSSQGPSQTS(0.018)T(0.802)PT(0.179)DVTAIHL 207.56 2.85E-17 25648300 2033.15 1899.92 2057.72 1905.7 2476.96 3019.57 3604.42 3205.51 3633.32 3448.31 TRUE FALSE 1860.219916 1776.234863 1918.0477 2052.477344 2378.297438 3190.535444 3363.975718 3177.484564 4011.016616 3875.512676 0.479993248 0.458322553 0.494914573 0.529601505 0.613672986 0.823255066 0.868007926 0.819887542 1.034964133 1 11.92017146 -6.821525093 0.759786912 0.982269332 0.445744895 0.9468479 0.048571028 0.139920532 0.175422856 0.034984915 0.032221004 1.51E-07 6.821525093 -0.536524437 down GSSSQGPSQTST(ph)PTDVTAIHL ddPTM_A459_MK2206_30min_R2 2 GSSSQGPSQTSTPTDVTAIHL 21 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 GSSSQGPSQT(0.001)S(0.026)T(0.951)PT(0.022)DVTAIHL;GS(0.022)S(0.044)S(0.322)QGPS(0.001)QT(0.014)S(0.068)T(0.528)PT(0.001)DVTAIHL 206.64 3.16E-17 15679000 14444.4 21687.2 20387.3 19208.4 22047 26776 32467 21468.4 31865 28653 TRUE FALSE 15550.27437 20610.24518 21067.00241 17639.01228 21181.324 27794.97944 28204.0439 24274.39359 34636.5601 27718.05496 0.561016074 0.743567513 0.760046202 0.636372657 0.764170647 1.002775248 1.017533299 0.875761075 1.249602837 1 14.7585384 -6.704160663 3.211738886 1.025164251 0.686618473 0.741168067 0.100337022 0.130017519 2.724795972 0.034750784 0.033458738 1.98E-07 6.704160663 -0.338545778 GSSSQGPSQTSTPT(ph)DVTAIHL ddPTM_A459_MK2206_30min_R2 1 GSSSQGPSQTSTPTDVTAIHL 21 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 GSSSQGPSQT(0.02)S(0.299)T(0.299)PT(0.382)DVTAIHL 160.46 2.33E-07 9305900 16678 20852 17030 21418 23459 32484 32959 30034 36381 39876 TRUE FALSE 17954.8805 19816.52 17597.7717 19668.08089 22537.88179 33720.20138 28631.44371 33959.54692 39545.35362 38574.84939 0.465455622 0.513716069 0.456198066 0.509867989 0.584263637 0.874149917 0.742230862 0.880354621 1.02515899 1 15.2353729 -6.979025984 0.706814898 1.000481554 0.448974811 0.908107184 0.064931121 0.203391728 0.214270313 0.05265372 0.043253671 1.05E-07 6.979025984 -0.551506744 down GSSSS(ph)SPEHSASSDSTK ddPTM_A459_MK2206_30min_R1 1 GSSSSSPEHSASSDSTK 17 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 GSS(0.006)S(0.072)S(0.85)S(0.072)PEHSASSDSTK 233.62 9.21E-17 12428000 5639.9 2899.1 3341.2 2399 5788.5 5689 7436.4 6200.4 1025.8 3186.5 TRUE FALSE 5160.196889 2710.368063 3114.408653 2583.771396 5557.931788 6011.106264 6940.331324 6146.190557 1132.435581 3581.267677 1.440885562 0.756818062 0.869638612 0.721468382 1.551945369 1.678485611 1.937953806 1.716205297 0.316210818 1 11.80625464 -6.268359911 24.85554013 1.446752382 0.928063463 0.148488776 0.468483518 807.5777167 2900463.585 0.146357631 0.169582912 5.39E-07 6.268359911 -0.518688919 GSSSS(ph)SPEHSASSDSTK ddPTM_A459_MK2206_30min_R2 1 GSSSSSPEHSASSDSTK 17 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 GS(0.086)S(0.086)S(0.086)S(0.371)S(0.371)PEHSASSDSTK 93.92 0.0046777 21364000 12108 20963 19464 33322 30122 29657 33130 28346 26654 28146 TRUE FALSE 13034.99779 19922.0079 20112.92005 30599.48601 28939.25893 30785.61792 28779.9912 32050.91953 28972.31674 27227.59833 0.478742107 0.731684362 0.738696076 1.123840805 1.062864913 1.130676953 1.057015417 1.177148243 1.064079042 1 14.73278211 -5.450972825 1.406853043 1.101863572 0.525411981 0.874408813 0.076677559 0.15135968 0.532912039 0.022385697 0.086329109 3.54E-06 5.450972825 -0.576451591 GSSSSS(ph)PEHSASSDSTK ddPTM_A459_MK2206_30min_R1 3 GSSSSSPEHSASSDSTK 17 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 GSSS(0.005)S(0.064)S(0.931)PEHSASSDSTK;GSSS(0.003)S(0.029)S(0.967)PEHSASSDSTK;GS(0.001)S(0.006)S(0.032)S(0.376)S(0.563)PEHS(0.019)AS(0.001)S(0.001)DSTK 321.82 1.09E-118 13405900 3868.2 1658.17 2271.32 1798.61 3817.86 4202.7 5183.64 3939.35 213.26 1782.05 TRUE FALSE 3539.189277 1550.222832 2117.149127 1937.139254 3665.786552 4440.653242 4837.848834 3904.908678 235.4291402 2002.823808 1.767099664 0.774018576 1.057082065 0.967204028 1.830309055 2.217196153 2.415513943 1.949701548 0.117548603 1 10.96781979 -6.262615259 24.94457711 1.708660987 1.109093821 0.080600156 0.665813193 206.4408043 4379337.598 0.207342798 0.248496548 5.46E-07 6.262615259 -0.599567166 GSSSSS(ph)PEHSASSDSTK ddPTM_A459_MK2206_30min_R2 1 GSSSSSPEHSASSDSTK 17 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 GSS(0.004)S(0.015)S(0.065)S(0.912)PEHS(0.004)AS(0.001)SDSTK 120.59 0.0014608 10550000 3867.8 7609.3 5844.8 12944 11463 10717 13413 8297.9 10886 10930 TRUE FALSE 4163.921742 7231.433227 6039.662715 11886.43379 11012.90502 11124.84294 11651.85699 9382.464021 11832.8446 10573.355 0.393812725 0.683929862 0.571215354 1.124187526 1.041571481 1.052158274 1.102001871 0.887368676 1.119119202 1 13.36814561 -5.755008592 24.9999103 1.044263403 0.563080202 0.85864343 0.092353729 51.18964447 198999.0088 0.024222857 0.040696602 1.76E-06 5.755008592 -0.481183201 GSST(ph)PTKGIENK ddPTM_A459_MK2206_30min_R1 3 GSSTPTKGIENK 12 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBE9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 GS(0.004)S(0.122)T(0.868)PT(0.007)KGIENK;GS(0.003)S(0.169)T(0.824)PT(0.004)KGIENK;GSS(0.028)T(0.97)PT(0.002)KGIENK 180.3 0.0010775 21043100 16878.6 16463 17311 23317.2 21854.3 14007.7 11073.3 23801.3 4910.1 2519.37 TRUE FALSE 15442.98644 15391.25571 16135.97755 25113.09478 20983.79695 14800.80387 10334.62036 23593.20774 5420.522466 2831.488576 5.454016862 5.435747062 5.698761312 8.869219886 7.410871134 5.227216523 3.649889478 8.332439673 1.914372006 1 11.46734499 -8.382248562 5.65267261 1.084466638 6.208834146 0.626408646 1.488076857 0.152241532 6.064599918 1.493162987 0.388077787 4.15E-09 8.382248562 5.124367508 GSTDNLMDDIER ddPTM_A459_MK2206_30min_R1 2 GSTDNLMDDIER 12 0 P50990-2;P50990;P50990-3 P50990-2 CCT8 T-complex protein 1 subunit theta 0 ; 209.85 0.00098095 10104500 2444.2 2800.39 2239.13 2178.08 2656.8 2511.2 2529 2291.45 2262.1 1764.38 FALSE TRUE 2236.307955 2618.084102 2087.144094 2345.836099 2550.97403 2653.381974 2360.295024 2271.416094 2497.25339 1982.964715 1.127759833 1.320287791 1.052537183 1.182994373 1.286444489 1.338088345 1.190285942 1.145464706 1.259353417 1 10.95344329 -10.93669081 5.75466125 0.999910031 1.21252209 0.353210775 0.085837556 0.000100129 1.02E-05 0.083991259 0.020362282 1.16E-11 10.93669081 0.212612059 GSTDNLMDDIER ddPTM_A459_MK2206_30min_R2 2 GSTDNLMDDIER 12 0 P50990-2;P50990;P50990-3 P50990-2 CCT8 T-complex protein 1 subunit theta 0 ; 184.03 0.0014457 6142000 20139.1 31444 28495 35002 31088 30486 35310 25791 29244 28608 FALSE TRUE 21680.96498 29882.53668 29445.00908 32142.22463 29867.32892 31646.16609 30673.75459 29161.97225 31787.59026 27674.5233 0.783426863 1.079785056 1.063975294 1.161437337 1.079235533 1.1435126 1.108375174 1.053747952 1.148622866 1 14.75627085 -4.756843883 4.617621052 1.099271013 0.756992036 0.797558086 0.046827491 0.080569309 3.915234788 0.010893765 0.091942605 1.75E-05 4.756843883 -0.342278977 GSTDS(ph)LDSLSSR ddPTM_A459_MK2206_30min_R2 1 GSTDSLDSLSSR 12 0 Q9ULJ8-3;Q9ULJ8;Q9ULJ8-4;Q9ULJ8-5 Q9ULJ8-3 PPP1R9A Neurabin-1 1 GST(0.085)DS(0.911)LDS(0.003)LSSR 214.61 1.47E-06 12633000 53758 68682 59836 66102 46664 61022 79546 53470 57710 54224 TRUE FALSE 57873.75381 65271.35175 61830.90238 60701.25515 44831.73689 63344.23497 69101.51465 60458.71259 62729.51148 52454.67532 1.103309733 1.244338114 1.17874912 1.157213438 0.85467571 1.20759941 1.317356636 1.152589587 1.195880274 1 15.67878375 GSTES(ph)CNTTTEDEDLKVR ddPTM_A459_MK2206_30min_R2 1 GSTESCNTTTEDEDLKVR 18 1 Q8WU40;Q13555-10;Q5SWX3;Q13555-5;Q13555-4;Q13555-11 Q8WU40 CAMK2G 1 GS(0.102)T(0.13)ES(0.742)CNT(0.025)T(0.001)TEDEDLKVR 112.53 0.00067595 6478900 7070.4 10339 10269 11770 10733 7757.4 12910 8805.8 7625.1 6971.9 TRUE FALSE 7611.71526 9825.580294 10611.36333 10808.35335 10311.56849 8052.613293 11214.90149 9956.748295 8288.317415 6744.407474 1.128596588 1.456848557 1.573357389 1.602565294 1.52890651 1.193968977 1.662844592 1.476296967 1.228917062 1 12.71947599 -8.503267908 2.939677088 1.002433858 1.462477653 0.442954191 0.161640429 0.217042994 4.440380863 0.156705555 0.04193283 3.14E-09 8.503267908 0.460043795 GSTIYTGYPLS(ph)PTK ddPTM_A459_MK2206_30min_R1 2 GSTIYTGYPLSPTK 14 0 Q5SQL3;J3KP92;Q86Z02;H3BLW0;Q86Z02-4;Q86Z02-3 Q5SQL3 HIPK1 Homeodomain-interacting protein kinase 1 1 GSTIYTGYPLS(0.995)PT(0.005)K;GSTIYTGYPLS(0.956)PT(0.044)K 125.22 0.0013974 15548100 5517.7 6562.3 5863 5150.1 5366.1 4398.4 4899 5029.2 5543.3 4759.7 TRUE FALSE 5048.39064 6135.093077 5465.035895 5546.761594 5152.356874 4647.433607 4572.196649 4985.230235 6119.545872 5349.36757 0.943735979 1.146881944 1.021622804 1.036900441 0.963171217 0.868781879 0.854717233 0.9319289 1.143975581 1 12.38515262 -6.279996522 3.993943602 0.946026543 1.045215878 0.142770704 0.088241471 0.366044418 13.58662597 0.028458606 0.034355564 5.25E-07 6.279996522 0.099189336 GSTIYTGYPLS(ph)PTK ddPTM_A459_MK2206_30min_R2 2 GSTIYTGYPLSPTK 14 0 Q5SQL3;J3KP92;Q86Z02;H3BLW0;Q86Z02-4;Q86Z02-3 Q5SQL3 HIPK1 Homeodomain-interacting protein kinase 1 1 GSTIYTGYPLS(0.674)PT(0.326)K;GSTIYTGYPLS(0.993)PT(0.007)K 131.86 0.00085516 8157700 57356 61959 55883 53948 57250 45173 52491 45327 41643 59138 TRUE FALSE 61747.21946 58882.20616 57746.11133 49540.27583 55002.07734 46892.09017 45598.86865 51251.39453 45265.03287 57208.3319 1.079339624 1.029259274 1.009400369 0.8659626 0.961434734 0.819672391 0.797066915 0.895872906 0.791231476 1 15.80393766 -5.580330494 1.025051024 0.857525681 1.089058781 0.565763127 0.065385675 0.484163981 0.877224043 0.023224488 0.092818567 2.63E-06 5.580330494 0.2315331 GSVFLESDS(ph)SPPSSSDAGLR ddPTM_A459_MK2206_30min_R2 1 GSVFLESDSSPPSSSDAGLR 20 0 Q8TBP0 Q8TBP0 TBC1D16 TBC1 domain family member 16 1 GSVFLES(0.002)DS(0.495)S(0.495)PPS(0.006)S(0.002)S(0.001)DAGLR 195.96 1.71E-15 4013600 17014 15745 18738 16847 18491 20687 21605 15530 16931 16703 TRUE FALSE 18316.60492 14963.1262 19362.71557 15470.54621 17764.95043 21474.25828 18768.23755 17559.82432 18403.62778 16157.98248 1.1335948 0.926051641 1.198337453 0.957455315 1.099453503 1.32901854 1.161545853 1.08675847 1.13898055 1 13.97995945 -6.526123316 24.99978643 1.156982581 1.051725959 0.130146884 0.106016343 171.042868 1317887.717 0.033773814 0.033940764 2.98E-07 6.526123316 -0.105256622 GSVFLESDSS(ph)PPSSSDAGLR ddPTM_A459_MK2206_30min_R1 1 GSVFLESDSSPPSSSDAGLR 20 0 Q8TBP0 Q8TBP0 TBC1D16 TBC1 domain family member 16 1 GSVFLESDS(0.16)S(0.801)PPS(0.033)S(0.005)S(0.001)DAGLR 181.86 1.81E-13 5301100 1911.8 1728.1 2031.7 1535 2034.2 1765.5 2352.7 1640.8 1952.2 2432.7 TRUE FALSE 1749.191371 1615.600376 1893.793865 1653.225966 1953.173507 1865.461084 2195.755676 1626.454659 2155.138176 2734.081242 0.639773005 0.59091162 0.692661884 0.604673314 0.714380201 0.682299068 0.803105497 0.594881613 0.788249501 1 11.4168404 -14.52287875 0.162236282 2.236741364 0.591396029 0.741706078 0.06086561 64.25594792 0.592372812 25.45673451 0.238012947 3.00E-15 14.52287875 -1.645345335 GSVFLESDSS(ph)PPSSSDAGLR ddPTM_A459_MK2206_30min_R2 1 GSVFLESDSSPPSSSDAGLR 20 0 Q8TBP0 Q8TBP0 TBC1D16 TBC1 domain family member 16 1 GSVFLES(0.004)DS(0.218)S(0.688)PPS(0.055)S(0.018)S(0.018)DAGLR 135.95 0.00010676 4011200 13463 11947 11824 14619 12502 13127 14216 9613.8 9253 18058 TRUE FALSE 14493.73763 11353.72935 12218.20626 13424.58094 12011.10866 13626.55718 12349.42212 10870.35667 10057.80921 17468.76894 0.829694278 0.649944446 0.699431443 0.768490383 0.687576137 0.780052517 0.706942897 0.622273768 0.575759474 1 14.09249032 -7.514234827 24.52056013 0.692331652 0.730750228 0 0.116694642 1672.4838 4744451.048 0.04936601 0.030354326 3.06E-08 7.514234827 0.038418576 GSVPLSS(ph)SPPATHFPDETEITNPVPK ddPTM_A459_MK2206_30min_R1 2 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GS(0.009)VPLS(0.11)S(0.46)S(0.4)PPAT(0.021)HFPDETEITNPVPK;GS(0.109)VPLS(0.075)S(0.375)S(0.375)PPAT(0.066)HFPDETEITNPVPK 71.06 0.00047142 267759100 10611.1 10274.1 8625.9 7987.5 7897.6 9592.8 10369.1 7793.5 9517 9488.2 TRUE FALSE 9708.570224 9605.254223 8040.397941 8602.698634 7583.021869 10135.93605 9677.396258 7725.362251 10506.32621 10663.66985 0.910434247 0.900745649 0.753999144 0.806729649 0.711108087 0.950511052 0.907510866 0.724456248 0.985244888 1 13.3804164 -6.788702103 24.99918347 0.89594599 0.817251239 0.21039255 0.090748935 445.0606166 408105.4152 0.032603656 0.028760751 1.63E-07 6.788702103 -0.078694751 GSVPLSSS(ph)PPATHFPDETEITNPVPK ddPTM_A459_MK2206_30min_R1 2 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GSVPLS(0.012)S(0.184)S(0.66)PPAT(0.144)HFPDETEITNPVPK;GS(0.001)VPLS(0.05)S(0.14)S(0.405)PPAT(0.405)HFPDETEITNPVPK 129.42 4.17E-09 1562680000 13709.6 12224.3 11370.7 10025.5 10776.8 12693.4 12551 9237.5 12865.7 12402.5 TRUE FALSE 12543.52653 11428.49585 10598.88856 10797.66575 10347.53724 13412.08934 11713.74569 9156.737511 14203.13556 13939.01533 0.899886127 0.819892623 0.760375702 0.774636191 0.742343486 0.962197761 0.840356755 0.656914229 1.01894827 1 13.76684103 -8.292654037 24.75789187 1.009474315 0.808987034 0.505345161 0.080080731 576.7944585 457478.6996 0.078062485 0.020164705 5.10E-09 8.292654037 -0.200487281 GSVPLSSSPPAT(ph)HFPDETEITNPVPK ddPTM_A459_MK2206_30min_R1 1 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GSVPLS(0.004)S(0.014)S(0.051)PPAT(0.93)HFPDETEITNPVPK 94.359 6.55E-06 884610000 4106.1 3680.1 3490.6 3085.6 2780 3372.2 3545.8 2903.4 3437.6 3486.9 TRUE FALSE 3756.854633 3440.524821 3253.667797 3323.253447 2669.266713 3563.13105 3309.266152 2878.01588 3794.950822 3918.883497 0.95865433 0.877934959 0.83025377 0.848010269 0.681129387 0.909220969 0.844441065 0.734396897 0.968375514 1 11.93622697 -8.425640548 6.693964507 0.99936818 0.835015059 0.38687499 0.07534498 0.231224327 12.54525625 0.072937599 0.018882619 3.75E-09 8.425640548 -0.16435312 GSVPLSSSPPAT(ph)HFPDETEITNPVPK ddPTM_A459_MK2206_30min_R2 6 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GS(0.001)VPLS(0.008)S(0.022)S(0.022)PPAT(0.946)HFPDETEITNPVPK;GSVPLS(0.003)S(0.038)S(0.134)PPAT(0.826)HFPDETEITNPVPK;GSVPLS(0.018)S(0.061)S(0.206)PPAT(0.714)HFPDETEITNPVPK;GSVPLS(0.045)S(0.166)S(0.166)PPAT(0.623)HFPDETEITNPVPK;GSVPLS(0.005)S(0.097)S(0.195)PPAT(0.703)HFPDETEITNPVPK;GSVPLS(0.002)S(0.021)S(0.021)PPAT(0.957)HFPDETEITNPVPK 111.25 2.44E-08 3814022900 760589 1035916 726251 1031535 731403 783091 1096076 829413 572852 848609 TRUE FALSE 818820.2786 984473.9178 750463.8459 947255.2908 702684.4432 812892.0767 952159.9046 937820.1269 622677.6315 820918.9578 0.9974435 1.199233991 0.914175314 1.15389623 0.855972976 0.990222079 1.159870771 1.142402813 0.758512915 1 19.64688028 -1.522879093 0.172869079 0.974792173 1.386832225 0.036924192 0.136262749 260.5861768 2.854353998 0.338859138 27.88705177 0.029999976 1.522879093 0.412040052 GSVPLSSSPPATHFPDET(ph)EITNPVPK ddPTM_A459_MK2206_30min_R1 2 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GS(0.003)VPLS(0.01)S(0.14)S(0.14)PPAT(0.157)HFPDET(0.466)EIT(0.084)NPVPK;GS(0.01)VPLS(0.009)S(0.013)S(0.013)PPAT(0.047)HFPDET(0.735)EIT(0.172)NPVPK 62.57 0.002635 51455000 17053.7 14883.6 14393.7 12382.1 12278.8 16124.9 15520.5 10639.9 15236.1 14726.7 TRUE FALSE 15603.19326 13914.67493 13416.69575 13335.77149 11789.7094 17037.8779 14485.15576 10546.87648 16819.94712 16551.15478 0.942725355 0.840707197 0.810619919 0.805730577 0.712319446 1.0294072 0.875174932 0.63722904 1.016240096 1 14.01464426 -6.741773141 24.99987432 0.886659976 0.82185369 0.107185602 0.118199327 769.3542891 978007.1247 0.039405769 0.039354023 1.81E-07 6.741773141 -0.064806285 GSVS(ph)SVSPKPPSSFK ddPTM_A459_MK2206_30min_R2 1 GSVSSVSPKPPSSFK 15 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 GS(0.066)VS(0.613)S(0.178)VS(0.143)PKPPSSFK 65.905 0.03558 26114000 100370 86447 86278 85534 98739 74646 123550 95455 81388 116620 TRUE FALSE 108054.4044 82154.16769 89154.46546 78545.59859 94862.01074 77486.70584 107327.7366 107931.2962 88466.98112 112814.699 0.957804305 0.728222195 0.790273486 0.696235502 0.840865699 0.686849378 0.951363055 0.956713064 0.784179561 1 16.78359553 -7.277797528 24.90692446 0.919456684 0.779834024 0.365722466 0.089999498 861.948916 1312398.538 0.035928041 0.024303042 5.27E-08 7.277797528 -0.13962266 GSVSQPSTPS(ph)PPKPTGIFQTSANSSFEPVK ddPTM_A459_MK2206_30min_R1 2 GSVSQPSTPSPPKPTGIFQTSANSSFEPVK 30 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 GSVSQPS(0.008)T(0.143)PS(0.424)PPKPT(0.424)GIFQT(0.001)SANSSFEPVK;GSVSQPS(0.024)T(0.094)PS(0.664)PPKPT(0.208)GIFQT(0.005)S(0.005)ANSSFEPVK 116.83 7.62E-16 25926000 6374.6 6586.9 7265.8 5707.7 5319.8 4736.5 5158.5 5712.2 5130.5 5568.9 TRUE FALSE 5832.406796 6158.091613 6772.61774 6147.308043 5107.901101 5004.676537 4814.385877 5662.258838 5663.833835 6258.817375 0.931870423 0.983906582 1.082092244 0.982183642 0.816112821 0.799620158 0.769216545 0.904685102 0.904936747 1 12.61167437 -6.191561977 5.951552478 0.853027029 1.002149559 0.438391068 0.070771131 0.199230737 13.09831947 0.021527702 0.027859291 6.43E-07 6.191561977 0.149122529 GSVSQPSTPS(ph)PPKPTGIFQTSANSSFEPVK ddPTM_A459_MK2206_30min_R2 1 GSVSQPSTPSPPKPTGIFQTSANSSFEPVK 30 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 GSVS(0.001)QPS(0.01)T(0.011)PS(0.917)PPKPT(0.05)GIFQT(0.009)S(0.002)ANSSFEPVK 87.739 9.93E-07 13019000 40782 43255 44783 43412 45808 34560 43015 32777 30147 44173 TRUE FALSE 43904.30128 41107.0196 46276.04287 39865.10073 44009.34775 35875.20502 37367.07883 37061.06644 32769.13157 42731.63863 1.027442492 0.961980886 1.082945666 0.93291767 1.029900775 0.839546672 0.874459301 0.86729804 0.766858764 1 15.38301702 -6.762210556 24.99982713 0.86164034 1.004633716 0.521056613 0.06562416 15.62866868 506635.6773 0.021063375 0.019673895 1.73E-07 6.762210556 0.142993375 GSVSQPSTPSPPKPT(ph)GIFQTSANSSFEPVK ddPTM_A459_MK2206_30min_R2 1 GSVSQPSTPSPPKPTGIFQTSANSSFEPVK 30 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 GSVSQPSTPS(0.059)PPKPT(0.891)GIFQT(0.022)S(0.022)ANS(0.003)S(0.001)FEPVK 101.75 4.16E-08 12426000 43259 53530 47195 47443 45729 35655 51006 40180 33623 44618 TRUE FALSE 46570.9423 50871.77804 48768.45774 43566.75514 43933.44969 37011.87601 44308.85093 45431.66396 36547.46776 43162.11831 1.078977217 1.178620977 1.129890275 1.009374814 1.017870564 0.85750833 1.026568034 1.052581887 0.846748704 1 15.39747805 -5.880658545 2.379170338 0.967550248 1.13761217 0.531417781 0.068026008 0.226037224 2.600415485 0.020518057 0.034490578 1.32E-06 5.880658545 0.170061922 GSVSS(ph)VSPKPPSSFK ddPTM_A459_MK2206_30min_R2 1 GSVSSVSPKPPSSFK 15 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 GS(0.001)VS(0.148)S(0.477)VS(0.373)PKPPS(0.001)SFK 98.573 0.004836 27945000 147120 128700 136560 122050 140730 101350 176710 130890 120390 176370 TRUE FALSE 158383.6203 122308.9451 141112.8422 112078.1246 135204.2331 105206.9453 153507.7647 147997.7724 130861.3046 170615.0613 0.928309723 0.716870739 0.827083149 0.656906393 0.792451921 0.616633399 0.899731615 0.867436739 0.766997377 1 17.38038548 -9.18050338 0.585620883 1.007129841 0.765923665 0.309862078 0.095922219 2.786457758 1.474606238 0.153076456 0.04071542 6.60E-10 9.18050338 -0.241206176 GSVSSVS(ph)PKPPSSFK ddPTM_A459_MK2206_30min_R1 1 GSVSSVSPKPPSSFK 15 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 GSVS(0.011)S(0.036)VS(0.949)PKPPS(0.003)S(0.001)FK 148.18 0.0014699 10445000 2010.5 2815.9 2680.3 2667.4 1990.2 1762.6 1885.7 2189.4 2251.5 1817.6 TRUE FALSE 1839.496417 2632.584398 2498.368704 2872.84361 1910.92612 1862.396889 1759.908394 2170.258307 2485.551482 2042.77801 0.900487673 1.288727598 1.223025063 1.406341558 0.935454616 0.911698128 0.861526992 1.06240536 1.216750655 1 10.99631672 -6.287225885 24.97615085 0.989956874 1.211964203 0.313479663 0.149395252 896.7718616 868587.7849 0.047778416 0.054192696 5.16E-07 6.287225885 0.222007329 GSVSSVSPKPPS(ph)SFK ddPTM_A459_MK2206_30min_R1 1 GSVSSVSPKPPSSFK 15 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 GSVS(0.002)S(0.014)VS(0.024)PKPPS(0.823)S(0.137)FK 100.88 0.034675 7975800 1910.9 2504.5 2408.9 2309.2 1638.1 1716.8 2026.1 2257.8 2244.9 2080.8 TRUE FALSE 1748.36792 2341.456595 2245.39058 2487.054984 1572.851008 1814.003732 1890.942566 2238.060293 2478.265388 2338.585213 0.747617795 1.001227828 0.960149139 1.063487005 0.67256519 0.775684256 0.808583991 0.957014643 1.059728495 1 11.19142028 -7.980069988 5.208618863 1.024854868 0.868017033 0.262931809 0.114510522 0.265875459 20.5935903 0.074520969 0.032558008 1.05E-08 7.980069988 -0.156837834 GSWSS(ph)APTSR ddPTM_A459_MK2206_30min_R1 2 GSWSSAPTSR 10 0 Q9H7P9;Q9H7P9-3;H7BXC7 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 GS(0.006)WS(0.409)S(0.524)APT(0.061)SR;GSWS(0.224)S(0.776)APTSR 131.42 0.0026131 69279000 12143 11165.9 11129.7 9184.5 13097.6 10524.7 12396.3 11019.6 9808.4 9456.6 TRUE FALSE 11110.17408 10438.99788 10374.24697 9891.891781 12575.89486 11120.59942 11569.36545 10923.2568 10828.01828 10628.155 1.045353035 0.982202262 0.976109868 0.930725209 1.183262274 1.046333951 1.088558216 1.027766042 1.018805077 1 13.37560355 -6.217352365 24.99964485 1.062841987 0.982963105 0.328148433 0.054057793 539.6840022 306028.8475 0.015894025 0.020519009 6.06E-07 6.217352365 -0.079878882 GSWSS(ph)APTSR ddPTM_A459_MK2206_30min_R2 1 GSWSSAPTSR 10 0 Q9H7P9;Q9H7P9-3;H7BXC7 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 GSWS(0.454)S(0.545)APT(0.001)SR 119.03 0.0055279 33024000 177680 190340 166130 216510 188340 182990 170870 130530 179860 172750 TRUE FALSE 191283.3174 180887.9924 171668.6913 198820.4404 180944.8253 189953.8127 148434.5637 147590.7192 195503.8977 167113.1816 1.144633329 1.082428032 1.027260026 1.189735235 1.082768118 1.136677615 0.888227741 0.883178201 1.169889148 1 17.35046601 -7.244888203 24.94877768 0.975588618 1.107849935 0.343433079 0.084367996 870.2549299 1311799.782 0.031969477 0.024690955 5.69E-08 7.244888203 0.132261317 GSY(ph)REHY(ph)RS(ph)R ddPTM_A459_MK2206_30min_R1 1 GSYREHYRSR 10 2 B1AVT0;P49760-2;P49760-3;P49760 B1AVT0 CLK2 Dual specificity protein kinase CLK2 3 GS(0.004)Y(0.996)REHY(1)RS(1)R 53.567 0.043841 0 2810.6 2663.3 2881.4 2035.6 2743.6 3294.2 3701.9 2752.1 2978.5 2661 TRUE FALSE 2571.543711 2489.918686 2685.818596 2192.382265 2634.316602 3480.714757 3454.953005 2728.03868 3288.125734 2990.66477 0.859856891 0.83256362 0.898067421 0.73307523 0.880846502 1.163859886 1.155245831 0.912184711 1.099463159 1 11.54625049 -6.630257045 6.115844269 1.065235238 0.83257701 0.674937343 0.078683845 0.129244942 6.543735882 0.026619719 0.026566822 2.34E-07 6.630257045 -0.232658228 GSYGS(ph)DAEEEEYR ddPTM_A459_MK2206_30min_R2 1 GSYGSDAEEEEYR 13 0 Q9UDY2-7;Q9UDY2-4;A0A3B3IU51;A0A1B0GTW1;A0A2R8YDH4;A0A3B3ITE1;Q9UDY2-2;Q9UDY2-6;Q9UDY2-3;Q9UDY2;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 GSYGS(1)DAEEEEYR 153 0.00042345 23745000 48983 41901 49551 64748 37460 48941 51224 30579 39244 52228 TRUE FALSE 52733.17614 39820.25727 51203.00561 59457.88128 35989.13218 50803.48405 44498.22727 34575.78029 42657.37218 50523.80464 1.043729318 0.788148429 1.013443187 1.176829055 0.71232031 1.005535597 0.880737854 0.68434633 0.844302453 1 15.62467566 -6.274397301 24.99000104 0.847617382 0.990574412 0.236073034 0.131622506 1250.458137 2411566.287 0.041522594 0.047368338 5.32E-07 6.274397301 0.14295703 GSYGS(ph)DAEEEEYRQQLSEHSK ddPTM_A459_MK2206_30min_R2 3 GSYGSDAEEEEYRQQLSEHSK 21 1 Q9UDY2-7;Q9UDY2-4;A0A3B3IU51;A0A1B0GTW1;A0A2R8YDH4;A0A3B3ITE1;Q9UDY2-2;Q9UDY2-6;Q9UDY2-3;Q9UDY2;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 GS(0.283)Y(0.013)GS(0.704)DAEEEEYRQQLSEHSK;GS(0.296)Y(0.001)GS(0.703)DAEEEEYRQQLSEHSK;GS(0.017)Y(0.065)GS(0.824)DAEEEEY(0.093)RQQLS(0.001)EHSK 62.707 0.0061695 29862700 35846.8 78940 61352.4 94279 93384 94017 90229 67094 82413 55402.3 TRUE FALSE 38591.25857 75019.95439 63397.85839 86576.10412 89717.27494 97594.88282 78381.82392 75863.41617 89581.13377 53594.52749 0.720059685 1.39976893 1.18291664 1.615390753 1.67400067 1.820985974 1.462496781 1.415506764 1.671460464 1 15.70979807 -4.504857199 1.17198644 1.538500354 1.04E-12 0.477063387 0.233860639 2.278186797 1.734114252 0.068946368 5.007192577 3.13E-05 4.504857199 -1.538500354 GT(ph)LSDSEIETNSATSTIFGK ddPTM_A459_MK2206_30min_R1 1 GTLSDSEIETNSATSTIFGK 20 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;F8W8U2 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 GT(0.724)LS(0.112)DS(0.164)EIETNSATSTIFGK 115.87 0.00036494 6123800 3075.4 2882.5 3213.7 2628.5 3277.2 2691 2775.1 3170.4 2726.6 2666.1 TRUE FALSE 2813.82108 2694.848726 2995.562998 2830.947525 3146.662184 2843.362094 2589.978142 3142.681527 3010.039827 2996.396596 0.939068308 0.899363165 0.9997218 0.944783988 1.050148765 0.948927154 0.864364265 1.048820283 1.004553213 1 11.54901287 -1.522878745 0.350475363 0.988984271 0.161546628 0.124838072 0.054387063 142.2998026 2.002408122 0.047838076 77.84215537 0.03 1.522878745 -0.827437644 GT(ph)PDTDLEVQR ddPTM_A459_MK2206_30min_R2 2 GTPDTDLEVQR 11 0 P0C7T5 P0C7T5 ATXN1L Ataxin-1-like 1 GT(0.905)PDT(0.095)DLEVQR;GT(0.993)PDT(0.007)DLEVQR 128.57 0.0063769 11267000 28385 34671 27252 30478 30934 30045 33787 30452 22702 33001 TRUE FALSE 30558.17742 32949.28856 28160.56808 27987.84991 29719.37573 31188.38353 29350.72631 34432.18096 24676.57892 31924.18007 0.957211034 1.032110722 0.882107795 0.876697533 0.930936226 0.976951748 0.919388572 1.078561168 0.772974556 1 14.96236195 GT(ph)PGPDSSGSLGSGEFTGVK ddPTM_A459_MK2206_30min_R1 3 GTPGPDSSGSLGSGEFTGVK 20 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 GT(0.994)PGPDS(0.006)SGSLGSGEFTGVK;GT(0.975)PGPDS(0.023)S(0.002)GSLGSGEFTGVK;GT(1)PGPDSSGSLGSGEFTGVK 264.01 1.29E-47 40365400 3708.35 3983.79 4441.28 2840.9 3845.77 3970.01 4858.47 3460.01 4769.58 4915.67 TRUE FALSE 3392.935359 3724.444547 4139.818288 3059.70661 3692.584837 4194.788535 4534.370331 3429.759497 5265.394909 5524.660311 0.614143706 0.674149058 0.749334449 0.553827102 0.668382241 0.759284426 0.820750974 0.620809118 0.95307125 1 12.43167005 -8.409107563 0.565604598 1.012936912 0.653030799 0.631266018 0.084606832 0.580860687 0.45174544 0.088789321 0.041561105 3.90E-09 8.409107563 -0.359906113 GT(ph)PGPDSSGSLGSGEFTGVK ddPTM_A459_MK2206_30min_R2 2 GTPGPDSSGSLGSGEFTGVK 20 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 GT(0.654)PGPDS(0.131)S(0.215)GSLGSGEFTGVK;GT(1)PGPDSSGSLGSGEFTGVK 241.51 7.86E-30 20329100 41949 42352 35482 46574 45331 38704 46306 43429 30676 48764 TRUE FALSE 45160.64769 40248.86127 36664.95217 42768.75522 43551.07717 40176.90784 40225.96658 49105.31941 33344.14303 47172.83467 0.95734437 0.853221172 0.777247168 0.906639499 0.923223662 0.851695857 0.852735835 1.040966051 0.706850527 1 15.52566868 -10.77077039 4.088075625 1.000096175 0.87692652 0.155007664 0.087776888 120707208.4 235787.5566 117699.4621 0.020038596 1.70E-11 10.77077039 -0.123169656 GT(ph)PGSPSGTQEPR ddPTM_A459_MK2206_30min_R2 1 GTPGSPSGTQEPR 13 0 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 GT(0.479)PGS(0.476)PS(0.034)GT(0.011)QEPR 103.14 0.020427 7449000 6736.2 8456.6 7418.4 8760.5 8913.3 7922.2 9827.2 6792.5 8811.6 8089.4 TRUE FALSE 7251.928651 8036.657541 7665.725753 8044.739127 8563.319056 8223.684872 8536.876835 7680.303072 9578.01704 7825.44354 0.926711517 1.026990675 0.979589938 1.028023407 1.094291846 1.050890576 1.09091284 0.981452749 1.22395836 1 12.93395681 -4.720774748 0.553289044 1.077367671 0.848169976 0.306736477 0.065201635 5.386003547 1.197429121 0.034513268 0.810677824 1.90E-05 4.720774748 -0.229197695 GT(ph)PPLTPSDSPQTR ddPTM_A459_MK2206_30min_R1 3 GTPPLTPSDSPQTR 14 0 Q6NZY4;Q6NZY4-2 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 GT(1)PPLTPSDSPQTR;GT(1)PPLTPSDSPQTR;GT(0.999)PPLT(0.001)PSDSPQTR 175.01 0.0001762 37059300 3399.15 3346.3 2708.32 2534.24 3135.12 2713.54 3169.5 3165.84 2245.92 2414.9 TRUE FALSE 3110.034443 3128.455262 2524.486784 2729.427604 3010.241532 2867.17829 2958.068438 3138.161395 2479.391421 2714.076044 1.14589068 1.152677822 0.930145929 1.005656275 1.10912203 1.056410448 1.089898879 1.156254042 0.913530565 1 11.40624543 -7.48264445 0.009948967 6.06E-07 2.104369833 0.108356616 0.08081987 3969.554098 29.51081086 3085.916304 3151.449707 3.29E-08 7.48264445 2.104369227 GT(ph)PPLTPSDSPQTR ddPTM_A459_MK2206_30min_R2 2 GTPPLTPSDSPQTR 14 0 Q6NZY4;Q6NZY4-2 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 GT(1)PPLTPSDSPQTR;GT(1)PPLTPSDSPQTR 162.88 0.00063687 32994000 12181 6659.1 10755.6 9785.1 8619.6 10452.4 8679.5 5801 10308.2 8386.6 TRUE FALSE 13113.58673 6328.418777 11114.18634 8985.626029 8281.151194 10850.17341 7539.871224 6559.210618 11204.7886 8112.945929 1.616377927 0.780039561 1.369932258 1.107566365 1.020732945 1.33739008 0.929362933 0.808486914 1.381099874 1 12.98601016 -4.738399419 24.93068789 1.086790782 1.616380195 0.369766321 0.209343695 2110.432568 2283499.425 0.049771138 2.819721286 1.83E-05 4.738399419 0.529589412 GT(ph)PPPVFTPPLPK ddPTM_A459_MK2206_30min_R1 2 GTPPPVFTPPLPK 13 0 Q6NZY4;Q6NZY4-2 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 GT(1)PPPVFTPPLPK;GT(1)PPPVFTPPLPK 132.86 0.0032298 52711000 4384 4482.3 4451.3 4094.3 4633.5 4116.8 4660.6 3856.4 4058.9 3576.3 TRUE FALSE 4011.117779 4190.501455 4149.158158 4409.643695 4448.937883 4349.889658 4349.699878 3822.683901 4480.83718 4019.359044 0.997949607 1.042579528 1.032293486 1.097101216 1.106877449 1.082234658 1.082187441 0.951068033 1.114813862 1 11.97274974 -4.777682575 1.523309614 1.061970679 0.975114897 0.123756365 0.048720925 2.428295788 5.254733859 0.013926874 0.321756999 1.67E-05 4.777682575 -0.086855782 GT(ph)PPPVFTPPLPK ddPTM_A459_MK2206_30min_R2 2 GTPPPVFTPPLPK 13 0 Q6NZY4;Q6NZY4-2 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 GT(1)PPPVFTPPLPK;GT(1)PPPVFTPPLPK 155.39 0.00085493 61737000 162284 189324 175995 194116 184435 187212 213480 149240 154651 167347 TRUE FALSE 174708.5878 179922.4455 181862.5855 178256.1019 177193.1552 194336.4838 185449.8196 168746.1804 168102.2644 161886.4811 1.079204308 1.111411183 1.123395754 1.101117898 1.094551898 1.20044912 1.145554702 1.042373516 1.038395938 1 17.30462299 -7.849471041 5.353258608 1.026590357 1.122870087 0.640891245 0.032832654 0.145917023 6.751248392 0.019922876 0.009382428 1.41E-08 7.849471041 0.09627973 GT(ph)PQDLAR ddPTM_A459_MK2206_30min_R1 1 GTPQDLAR 8 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 GT(1)PQDLAR 105.17 0.033371 12005000 2452.4 2534.5 2369.5 1891.6 2396.9 2493 2951.5 2233.5 1880.6 2040.6 TRUE FALSE 2243.810502 2369.503589 2208.664942 2037.29136 2301.426397 2634.151506 2754.61082 2213.972745 2076.0951 2293.404934 0.978375196 1.033181517 0.963050576 0.888326056 1.003497622 1.148576715 1.201100939 0.965364953 0.905245763 1 11.16327539 -4.740970894 22.0356473 1.015467153 0.978374659 0.010463176 0.092976182 2405.419019 2588964.443 0.025795083 0.830527087 1.82E-05 4.740970894 -0.037092495 GT(ph)PQDLAR ddPTM_A459_MK2206_30min_R2 2 GTPQDLAR 8 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 GT(1)PQDLAR;GT(1)PQDLAR 120.63 0.017051 27984000 79768 85313 83483 100349 108456 107489 112930 72326 77043 93550 TRUE FALSE 85875.09941 81076.48048 86266.28155 92150.1657 104197.4725 111579.5692 98102.15535 81779.25653 83744.06088 90497.47116 0.948922642 0.895897746 0.953245217 1.018262328 1.15138546 1.232957869 1.084032008 0.903663445 0.925374597 1 16.46558986 -5.780403474 3.245657473 1.057335654 0.924364417 0.237903498 0.093114822 0.372996679 8.123078691 0.03104291 0.052786153 1.66E-06 5.780403474 -0.132971237 GT(ph)PSQSPVVGR ddPTM_A459_MK2206_30min_R2 3 GTPSQSPVVGR 11 0 P52594-2;P52594-3;P52594;P52594-4;C9J2I0;B8ZZY2 P52594-2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 1 GT(0.977)PS(0.023)QS(0.001)PVVGR;GT(0.964)PS(0.035)QSPVVGR;GT(0.997)PS(0.003)QSPVVGR 129.76 0.0059009 94827000 35781.3 40814.1 41506.6 44418.8 37650.6 38855.8 42451.5 31951.8 26660.6 37355.5 TRUE FALSE 38520.74384 38787.33114 42890.40933 40789.64195 36172.24826 40334.4847 36877.56706 36128.00997 28979.4908 36136.59309 1.06597608 1.073353292 1.186896873 1.128762799 1.000986678 1.116167332 1.02050481 0.999762481 0.801943081 1 15.14117288 -7.761675977 1.899529217 0.904783727 1.095307917 0.554021977 0.066391529 0.252317499 1.76711736 0.047701427 0.019364178 1.73E-08 7.761675977 0.19052419 GT(ph)SPRPPEGGLGYSQLGDDDLK ddPTM_A459_MK2206_30min_R1 2 GTSPRPPEGGLGYSQLGDDDLK 22 1 Q9UQ88-8;P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;P21127-10;P21127-5;P21127-4;P21127-12;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 Q9UQ88-8;P21127;Q5QPR4 CDK11A;CDK11B Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B 1 GT(0.533)S(0.466)PRPPEGGLGYSQLGDDDLK;GT(0.543)S(0.455)PRPPEGGLGYS(0.001)QLGDDDLK 93.176 0.00039538 61514000 4671.8 4793.5 5064.3 3884.2 3348.4 3750 4810.3 3676.9 6147 6924.6 TRUE FALSE 4274.438877 4481.442279 4720.549426 4183.361757 3215.026138 3962.321759 4489.413664 3644.753251 6786.002647 7782.471726 0.549239243 0.575837913 0.606561719 0.53753639 0.413111188 0.509134103 0.576862187 0.468328492 0.87195982 1 12.92601272 -8.388906085 3.829354125 0.993757733 0.531099316 0.897884764 0.055435646 0.067537361 1.629789616 0.057108635 0.01511226 4.08E-09 8.388906085 -0.462658417 GT(ph)SPRPPEGGLGYSQLGDDDLK ddPTM_A459_MK2206_30min_R2 2 GTSPRPPEGGLGYSQLGDDDLK 22 1 Q9UQ88-8;P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;P21127-10;P21127-5;P21127-4;P21127-12;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 Q9UQ88-8;P21127;Q5QPR4 CDK11A;CDK11B Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B 1 GT(0.499)S(0.499)PRPPEGGLGY(0.002)SQLGDDDLK;GT(0.538)S(0.462)PRPPEGGLGYSQLGDDDLK 69.581 0.0063325 70478000 114885 92618 99604 92322 82099 80713 109248 85889 60401 114670 TRUE FALSE 123680.6839 88018.7248 102924.7476 84778.99728 78875.38075 83784.58977 94903.60637 97114.9872 65654.5698 110928.3273 1.114960326 0.793473831 0.927849091 0.764268238 0.71104814 0.755303824 0.855539867 0.875475089 0.591864778 1 16.7592683 -2.416308259 1.330158807 0.795980791 199.9997872 0.397015454 0.110823222 869.8483586 3.252484436 0.030346802 526886.6084 0.00383435 2.416308259 199.2038064 GTAAFS(ph)PSHPLLPLR ddPTM_A459_MK2206_30min_R2 2 GTAAFSPSHPLLPLR 15 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 GT(0.002)AAFS(0.996)PS(0.002)HPLLPLR;GT(0.001)AAFS(0.996)PS(0.003)HPLLPLR 115.66 0.0015531 11690100 65904 67152 60244 77739 72940 79495 72996 56972 66624 80799 TRUE FALSE 70949.66091 63817.32933 62252.50489 71387.47503 70076.00911 82520.23793 63411.53752 64418.43601 72418.83509 78162.53525 0.907719545 0.816469542 0.796449408 0.913320874 0.896542172 1.055751808 0.811277901 0.824160012 0.926515944 1 16.25418964 -5.782943136 24.15887318 0.911268284 0.837838511 0.187494658 0.073376666 285.0278248 320219.6761 0.021344304 0.031696547 1.65E-06 5.782943136 -0.073429773 GTAGKS(ph)PDLSSQK ddPTM_A459_MK2206_30min_R1 1 GTAGKSPDLSSQK 13 1 Q9Y2I7 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 GT(0.005)AGKS(0.994)PDLS(0.001)SQK 159.18 0.0017297 7970300 2983.8 2263 2562.4 1911.7 2313.2 2005.6 2156.3 2135.4 2406.3 2610.5 TRUE FALSE 2730.012141 2115.678289 2388.471427 2058.939465 2221.060346 2119.155339 2012.457161 2116.730423 2656.443496 2933.908448 0.930503521 0.721112579 0.81409201 0.70177359 0.757031238 0.722297705 0.685930457 0.721471191 0.905428217 1 11.51860814 -8.448455972 3.543130906 0.998004187 0.752551595 0.587465568 0.067704703 0.141938942 3.461434921 0.063927388 0.01690795 3.56E-09 8.448455972 -0.245452593 GTAGKS(ph)PDLSSQK ddPTM_A459_MK2206_30min_R2 2 GTAGKSPDLSSQK 13 1 Q9Y2I7 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 GT(0.025)AGKS(0.962)PDLS(0.013)SQK;GTAGKS(0.914)PDLS(0.028)S(0.058)QK 174.39 0.00059161 4526800 36977 38553 33169 37381 33260 28272 41752 34385 29473 37419 TRUE FALSE 39807.98755 36638.51408 34274.83791 34326.85272 31954.04528 29347.91077 36269.91225 38879.23756 32036.50827 36198.02109 1.099728282 1.01216898 0.946870488 0.94830744 0.88275669 0.810760088 1.001986052 1.074070802 0.885034797 1 15.14362321 -4.875822152 1.838450952 0.94074886 1.13306335 0.330240242 0.069639067 0.865189583 3.577924284 0.020601469 0.273143607 1.33E-05 4.875822152 0.19231449 GTDDLNPVTSTPAKPS(ph)SPPPEFSFNTPGK ddPTM_A459_MK2206_30min_R2 1 GTDDLNPVTSTPAKPSSPPPEFSFNTPGK 29 1 B5MCR8;Q6NXT4-4;Q6NXT4-3;Q6NXT4;Q6NXT4-2 B5MCR8 SLC30A6 Zinc transporter 6 1 GTDDLNPVT(0.094)S(0.023)T(0.01)PAKPS(0.683)S(0.19)PPPEFSFNTPGK 76.818 2.85E-05 7099800 24980 16953 18236 15337 15601 13856 17438 11980 13146 15224 TRUE FALSE 26892.48801 16111.13867 18843.97914 14083.91804 14988.42635 14383.29979 15148.36965 13545.82713 14289.41532 14727.24213 1.82603693 1.093968479 1.279532106 0.956317409 1.017734768 0.976645842 1.028595138 0.919780297 0.970270957 1 13.84619967 -2.031560662 0.960003065 0.989397443 199.9999999 0.873394654 0.091822655 130.8735297 0.659124794 0.027981951 56633.37492 0.009299066 2.031560662 199.0106024 GTDDS(ph)PKDSQEDLQER ddPTM_A459_MK2206_30min_R2 1 GTDDSPKDSQEDLQER 16 1 Q969E4;Q6IPX3-2;Q6IPX3;Q5H9L2 Q969E4 TCEAL3;TCEAL6;TCEAL5 Transcription elongation factor A protein-like 3;Transcription elongation factor A protein-like 6;Transcription elongation factor A protein-like 5 1 GTDDS(0.999)PKDSQEDLQER 100.11 0.0034021 14586000 75429 84580 79433 64809 58949 42532 77419 53087 48497 73958 TRUE FALSE 81203.90224 80379.88019 82081.25657 59513.89739 56634.36607 44150.58506 67253.7923 60025.65317 52715.1814 71544.75652 1.135008437 1.123490862 1.14727145 0.831841497 0.791593526 0.617104414 0.940024057 0.838994443 0.736814044 1 16.12655842 -5.777722062 6.637779975 0.809697743 1.135069886 0.677532653 0.09869567 0.082628354 14.72953395 0.02733561 0.042754911 1.67E-06 5.777722062 0.325372144 GTDTQTPAVLS(ph)PSK ddPTM_A459_MK2206_30min_R1 6 GTDTQTPAVLSPSK 14 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GTDTQTPAVLS(0.769)PS(0.231)K;GTDT(0.001)QT(0.116)PAVLS(0.881)PS(0.002)K;GTDTQT(0.011)PAVLS(0.969)PS(0.019)K;GTDTQT(0.008)PAVLS(0.964)PS(0.028)K;GTDT(0.001)QT(0.059)PAVLS(0.915)PS(0.025)K;GTDTQT(0.002)PAVLS(0.77)PS(0.227)K 230.97 2.29E-13 871061200 65811.8 77200.9 72593.1 60085.5 53836.3 54262.8 58398.7 53983.7 73201 63329.5 TRUE FALSE 60214.16082 72175.10738 67665.68263 64713.29562 51691.88617 57335.11284 54503.02928 53511.7262 80810.5059 71175.23657 0.845998745 1.014048015 0.950691362 0.909210826 0.726262232 0.805548609 0.765758316 0.751830676 1.1353739 1 16.11908776 -2.996388969 9.285940087 0.878819947 0.504940838 0 0.127870738 0 0 0.029763067 0 0.001008349 2.996388969 -0.373879109 GTDTQTPAVLS(ph)PSK ddPTM_A459_MK2206_30min_R2 7 GTDTQTPAVLSPSK 14 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GTDTQTPAVLS(0.965)PS(0.035)K;GTDT(0.001)QT(0.002)PAVLS(0.983)PS(0.014)K;GTDTQTPAVLS(0.994)PS(0.006)K;GTDTQT(0.035)PAVLS(0.939)PS(0.026)K;GT(0.002)DT(0.005)QT(0.447)PAVLS(0.545)PS(0.001)K;GTDTQTPAVLS(0.911)PS(0.089)K;GTDTQTPAVLS(0.997)PS(0.003)K 188.71 9.40E-05 1931316600 3032984 2713124 2709236 2687437 2510982 2023279 3580874 2639652 2032128 3137779 TRUE FALSE 3265191.587 2578394.207 2799560.576 2467864.8 2412388.23 2100276.3 3110700.942 2984663.58 2208878.82 3035393.528 1.075706183 0.849443139 0.922305642 0.813029605 0.794753039 0.691928832 1.02480977 0.983287192 0.727707561 1 21.53345214 -10.44367482 21.38202527 1 0.874366768 0.088347535 0.119518516 0 0 0.116609412 0.028281937 3.60E-11 10.44367482 -0.125633232 GTDTQTPAVLS(ph)PSKTQATLKPK ddPTM_A459_MK2206_30min_R1 1 GTDTQTPAVLSPSKTQATLKPK 22 2 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GTDTQT(0.001)PAVLS(0.381)PS(0.381)KT(0.118)QAT(0.118)LKPK 54.668 0.010578 170660000 3823 4333 3650.9 3894 3233.3 3303.4 2983.5 3691.5 2698.5 1466.6 TRUE FALSE 3497.833775 4050.920912 3403.08708 4193.916555 3104.510814 3490.435653 2784.476159 3659.225605 2979.018732 1648.29348 2.122094042 2.457645414 2.064612353 2.544399165 1.883469692 2.11760569 1.689308483 2.220008541 1.807335142 1 10.68675742 -10.937097 0.21166474 2.42E-14 2.386063114 0.727738652 0.217246312 11.66471715 0.462366416 6.867886804 0.519058988 1.16E-11 10.937097 2.386063114 GTDTQTPAVLSPS(ph)K ddPTM_A459_MK2206_30min_R2 1 GTDTQTPAVLSPSK 14 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GTDTQTPAVLS(0.157)PS(0.843)K 142.39 0.00054651 4869900 29806 27030 28244 29889 30447 20684 35785 25731 21972 32757 TRUE FALSE 32087.97028 25687.72951 29185.64086 27446.97309 29251.4978 21471.14411 31086.38651 29094.13005 23883.08484 31688.14177 1.012617607 0.810641712 0.921027212 0.866159123 0.923105495 0.677576624 0.981010081 0.918139355 0.753691555 1 14.95165544 -4.745945209 24.86212392 0.870033484 1.012618024 0.162385068 0.095423143 1475.542175 2367532.116 0.022492453 0.535214563 1.79E-05 4.745945209 0.14258454 GTDTQTPAVLSPS(ph)KTQATLKPK ddPTM_A459_MK2206_30min_R2 1 GTDTQTPAVLSPSKTQATLKPK 22 2 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GTDTQTPAVLS(0.019)PS(0.559)KT(0.211)QAT(0.211)LKPK 52.432 0.015057 284180000 43675 66162 52857 57339 57395 44264 71377 50613 57283 53932 TRUE FALSE 47018.79158 62876.49129 54619.226 52654.22028 55141.38391 45948.49754 62005.11416 57228.29288 62265.3718 52172.20326 0.901223039 1.205172244 1.046902806 1.009238962 1.056911161 0.880708398 1.188470302 1.09691156 1.193458737 1 15.67099374 -7.307775005 24.9999277 1.127786095 1.02812217 0.202831383 0.097978097 716.7551345 386715.2109 0.039691644 0.026760255 4.92E-08 7.307775005 -0.099663924 GTDVNVFNTILT(ph)TR ddPTM_A459_MK2206_30min_R2 1 GTDVNVFNTILTTR 14 0 P04083 P04083 ANXA1 Annexin A1 1 GTDVNVFNTILT(0.909)T(0.091)R 117.13 0.0059625 3354600 10315 13849 10387 9585.9 10348 11239 10784 7491.4 10187 8778.8 TRUE FALSE 11104.72433 13161.2788 10733.2974 8802.701306 9941.685525 11666.70802 9368.047846 8470.551702 11073.04685 8492.348475 1.307615245 1.549780822 1.263878588 1.036544995 1.170663869 1.373790543 1.103116279 0.997433363 1.303885124 1 13.05194786 -1.522878745 0.237116232 1.065186843 3.258210259 0.33103075 0.140685098 58.69906757 0.779848656 0.202475314 50.45577678 0.03 1.522878745 2.193023416 GTEAPAVVT(ph)EEEDDDEETAPPVIAPRPDHTK ddPTM_A459_MK2206_30min_R1 4 GTEAPAVVTEEEDDDEETAPPVIAPRPDHTK 31 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK;GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK;GT(0.002)EAPAVVT(0.996)EEEDDDEET(0.003)APPVIAPRPDHTK;GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK 140.21 1.03E-18 116176000 22749.3 22710.7 22470.8 21205.9 23486.9 21338.9 22939 22720.2 19466.9 17266.8 TRUE FALSE 20814.35257 21232.2293 20945.5447 22839.18209 22551.36704 22547.09008 21408.78116 22521.55969 21490.55392 19405.94154 1.072576279 1.094109722 1.07933669 1.176916979 1.162085694 1.161865299 1.103207547 1.160549703 1.107421347 1 14.24421081 -5.724365009 24.88434753 1.133493687 1.083217699 0.119520049 0.048892316 268.6359049 180306.7689 0.012447294 0.021558455 1.89E-06 5.724365009 -0.050275988 GTEAPAVVT(ph)EEEDDDEETAPPVIAPRPDHTK ddPTM_A459_MK2206_30min_R2 3 GTEAPAVVTEEEDDDEETAPPVIAPRPDHTK 31 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK;GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK;GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK 131.3 2.34E-18 120879000 311188 405327 391245 407462 444803 397414 411631 321995 371182 380069 TRUE FALSE 335012.7925 385199.0506 404288.913 374171.0512 427337.7993 412537.8683 357583.3552 364080.8521 403466.7394 367667.3797 0.911184432 1.047683509 1.099605065 1.017689009 1.162294571 1.122040983 0.97257297 0.990245184 1.097368877 1 18.48804166 -4.7654625 4.98144702 1.059830248 0.902070599 0.351671174 0.059311351 0.200497034 13.0240883 0.015499031 0.110568403 1.72E-05 4.7654625 -0.157759649 GTEASS(ph)GTEAATGLEGEEK ddPTM_A459_MK2206_30min_R1 2 GTEASSGTEAATGLEGEEK 19 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 GTEAS(0.013)S(0.89)GT(0.097)EAATGLEGEEK;GTEAS(0.001)S(0.973)GT(0.026)EAATGLEGEEK 347.06 0 4053000 2724.8 2902.9 2756.8 1787.18 1779.15 1882.36 3618.6 2374.69 4178.8 5702.1 TRUE FALSE 2493.041452 2713.920682 2569.676097 1924.828913 1708.282688 1988.937596 3377.209797 2353.928336 4613.201214 6408.519197 0.389019893 0.423486394 0.400978138 0.300354708 0.26656434 0.310358374 0.526987545 0.367312364 0.719854474 1 12.64577532 -8.496983758 1.603640487 1.003759142 0.362986719 0.890160365 0.07156334 0.121992525 0.695212334 0.071733665 0.020927113 3.18E-09 8.496983758 -0.640772423 down GTEASS(ph)GTEAATGLEGEEK ddPTM_A459_MK2206_30min_R2 2 GTEASSGTEAATGLEGEEK 19 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 GTEAS(0.034)S(0.96)GT(0.006)EAATGLEGEEK;GT(0.003)EAS(0.12)S(0.431)GT(0.431)EAAT(0.016)GLEGEEK 311.43 7.55E-117 18244000 139705 79294 105003 84799 75457 73475 115067 80094 66849 133334 TRUE FALSE 150400.9222 75356.37526 108503.7476 77870.65044 72494.17904 76271.14261 99958.56468 90562.5608 72663.40518 128983.3225 1.166049372 0.584233479 0.841223078 0.603726505 0.562043043 0.591325616 0.774972785 0.702126128 0.563355043 1 16.97682501 -4.754527011 24.93029407 0.679513561 1.166050238 0.516759545 0.137250354 175.5898147 633227.8978 0.032139771 0.31021932 1.76E-05 4.754527011 0.486536677 GTEDITSPHGIPLDLLDR ddPTM_A459_MK2206_30min_R2 2 GTEDITSPHGIPLDLLDR 18 0 Q9Y265;H7C4G5;Q9Y265-2;J3QLR1;E7ETR0 Q9Y265 RUVBL1 RuvB-like 1 0 ; 137.73 0.00047862 3844600 29687 41779 32934 48545 53500 51222 42791 34825 44701 42536 FALSE TRUE 31959.85955 39704.31561 34032.00312 44578.71821 51399.32118 53171.2891 37172.4903 39376.74707 48589.01218 41148.0538 0.776704038 0.964913573 0.827062278 1.083373674 1.249131282 1.292194507 0.903383924 0.956952843 1.180833786 1 15.32853658 -5.784314091 9.777641296 1.100150186 0.867085759 0.435842553 0.124280393 0.309614813 126.1097227 0.037543442 0.056752628 1.64E-06 5.784314091 -0.233064426 GTENGVNGTLTSNVADS(ph)PR ddPTM_A459_MK2206_30min_R1 2 GTENGVNGTLTSNVADSPR 19 0 G3XAN4;Q15629-2;Q15629 G3XAN4 TRAM1 Translocating chain-associated membrane protein 1 1 GTENGVNGTLTSNVADS(1)PR;GTENGVNGTLTSNVADS(1)PR 237.14 1.25E-29 11167600 3490.5 3239 2055.29 2577.8 3515.6 2987.1 2848.3 3191.1 4214.5 2989.8 TRUE FALSE 3193.614646 3028.140511 1915.782641 2776.342603 3375.566208 3156.227021 2658.295104 3163.200549 4652.612357 3360.198996 0.95042426 0.901178923 0.570139639 0.826243507 1.004573304 0.93929765 0.791112404 0.941372982 1.384624054 1 11.71433096 -8.070166273 6.508515745 1.188809578 0.854159109 0.46867065 0.141747854 0.21392648 16.07542023 0.098312344 0.036834862 8.51E-09 8.070166273 -0.334650469 GTENGVNGTLTSNVADS(ph)PR ddPTM_A459_MK2206_30min_R2 3 GTENGVNGTLTSNVADSPR 19 0 G3XAN4;Q15629-2;Q15629 G3XAN4 TRAM1 Translocating chain-associated membrane protein 1 1 GTENGVNGTLTSNVADS(1)PR;GTENGVNGTLTSNVADS(1)PR;GTENGVNGTLTSNVADS(1)PR 285.27 2.93E-72 25535800 135959 58855 58964 62361 47189 79714 138438 54818 83423 74988 TRUE FALSE 146368.1256 55932.34628 60929.83033 57265.90682 45336.12275 82747.57213 120260.9243 61982.90082 90678.98175 72541.1477 2.017725528 0.771043029 0.839934744 0.789426534 0.624971126 1.140698414 1.657830461 0.854451615 1.250035113 1 16.14651195 -6.983786548 24.95421752 1.209995228 0.964768828 0.037131147 0.409964302 687.214076 1057691.335 0.144622915 0.12751156 1.04E-07 6.983786548 -0.245226399 GTENTFPS(ph)PK ddPTM_A459_MK2206_30min_R1 2 GTENTFPSPK 10 0 A6NIZ0;Q9GZM8-3;Q9GZM8;Q9GZM8-2;J3QSD2;J3QRZ1 A6NIZ0 NDEL1 Nuclear distribution protein nudE-like 1 1 GTENT(0.21)FPS(0.79)PK;GTENT(0.001)FPS(0.999)PK 97.163 0.020924 13101200 7321.4 8847.7 8751.9 7927.6 6045.2 5387.4 6739.2 7474.7 7200.4 7449.3 TRUE FALSE 6698.676484 8271.713122 8157.845412 8538.185126 5804.406883 5692.429932 6289.640264 7409.349486 7948.907347 8372.175523 0.800111807 0.988000443 0.974399711 1.019828729 0.693297324 0.679922431 0.751255184 0.884996912 0.949443466 1 13.03138684 -6.249297798 24.89821839 0.80964602 0.950673014 0.205500409 0.111641363 1055.772691 2165026.446 0.034609749 0.044333736 5.63E-07 6.249297798 0.141026994 GTENTFPS(ph)PK ddPTM_A459_MK2206_30min_R2 2 GTENTFPSPK 10 0 A6NIZ0;Q9GZM8-3;Q9GZM8;Q9GZM8-2;J3QSD2;J3QRZ1 A6NIZ0 NDEL1 Nuclear distribution protein nudE-like 1 1 GTENT(0.005)FPS(0.995)PK;GTENT(0.018)FPS(0.982)PK 144.28 0.00099767 12356300 125930 115896 116122 98504 97411 79867 130067 102867 88459 126548 TRUE FALSE 135571.2976 110140.7732 119993.4495 90455.9081 93586.15469 82906.39465 112989.0467 116312.0701 96153.00392 122418.7491 1.107439004 0.899705102 0.980188495 0.738905672 0.764475665 0.677236087 0.922971746 0.950116473 0.785443444 1 16.90146501 -3.240343921 9.595964856 0.872584482 0.99574793 0 0.129447941 0 0 0.030630758 0 0.000574984 3.240343921 0.123163447 GTEPS(ph)PGGTPQPSRPVS(ph)PAGPPEGVPEEAQPPR ddPTM_A459_MK2206_30min_R2 2 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 1 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 2 GT(0.014)EPS(0.672)PGGT(0.242)PQPS(0.16)RPVS(0.913)PAGPPEGVPEEAQPPR;GT(0.011)EPS(0.956)PGGT(0.035)PQPS(0.214)RPVS(0.784)PAGPPEGVPEEAQPPR 88.721 3.67E-08 20464500 19123 23594 23668 23546 26437 26428 22885 20407.9 21675.7 16613.9 TRUE FALSE 20587.07158 22422.35627 24457.07931 21622.21648 25398.95054 27433.73606 19880.17201 23075.2826 23561.01321 16071.7898 1.280944552 1.395137476 1.52173962 1.34535212 1.580343624 1.706949655 1.236960678 1.435763091 1.465985649 1 13.97224298 -10.08096643 8.008290459 1 1.444993402 0.498498134 0.132650011 0 0 0.130945765 0.031759013 8.30E-11 10.08096643 0.444993402 GTEPSPGGT(ph)PQPS(ph)RPVSPAGPPEGVPEEAQPPR ddPTM_A459_MK2206_30min_R2 1 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 1 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 2 GT(0.073)EPS(0.28)PGGT(0.676)PQPS(0.562)RPVS(0.409)PAGPPEGVPEEAQPPR 72.707 0.0011887 0 12252 14339 12525 16116 12771 12564 13751 10292 9958.2 11717 TRUE FALSE 13190.02254 13626.94611 12942.57725 14799.27125 12269.54637 13042.13182 11945.47718 11637.19974 10824.34624 11334.67525 1.163687733 1.202235248 1.141856909 1.305663455 1.082478862 1.150640097 1.053887908 1.026690177 0.9549763 1 13.46845544 -7.308450281 1.040139199 0.978205449 1.19307212 0.723898438 0.052357775 0.272993175 0.568466304 0.037060988 0.020272405 4.92E-08 7.308450281 0.214866671 GTEPSPGGTPQPS(ph)RPVSPAGPPEGVPEEAQPPR ddPTM_A459_MK2206_30min_R2 1 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 1 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 1 GTEPSPGGT(0.012)PQPS(0.494)RPVS(0.494)PAGPPEGVPEEAQPPR 106.72 4.78E-14 40779000 8516.1 18702 12873 20447 17374 23662 31573 22636 33801 31778 TRUE FALSE 9168.099164 17773.28588 13302.1794 18776.41469 16691.80946 24562.47399 27427.42717 25594.60292 36740.94988 30741.08646 0.298236016 0.578160629 0.432716632 0.610792163 0.542980466 0.799011252 0.892207476 0.832586153 1.195174085 1 14.90788053 -6.990498775 0.666526084 1.072095855 0.421230711 0.841206614 0.10364761 0.272120709 0.255003895 0.079983939 0.067587613 1.02E-07 6.990498775 -0.650865144 down GTEPSPGGTPQPSRPVS(ph)PAGPPEGVPEEAQPPR ddPTM_A459_MK2206_30min_R1 1 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 1 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 1 GTEPS(0.004)PGGT(0.003)PQPS(0.031)RPVS(0.962)PAGPPEGVPEEAQPPR 88.191 1.12E-08 25949000 223.49 214.69 304.76 189.59 362.03 307.19 379.81 384.88 445.23 257.41 TRUE FALSE 204.4810019 200.713642 284.0737403 204.1922547 347.6095785 324.5828323 354.4735679 381.5150347 491.5132518 289.2998941 0.706813262 0.693790928 0.981935169 0.705815172 1.201554461 1.121959734 1.225280669 1.318752763 1.698974876 1 8.176421985 -6.476326317 0.856083011 1.358999091 0.718700649 0.613406062 0.188604126 0.391041123 0.630317853 0.103726486 0.133435748 3.34E-07 6.476326317 -0.640298442 GTEPSPGGTPQPSRPVS(ph)PAGPPEGVPEEAQPPR ddPTM_A459_MK2206_30min_R2 1 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 1 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 1 GTEPS(0.008)PGGT(0.027)PQPS(0.084)RPVS(0.881)PAGPPEGVPEEAQPPR 88.295 1.10E-08 36556000 20280 33818 26513 35267 37114 43597 65496 57023 66235 71232 TRUE FALSE 21832.65239 32138.6473 27396.93019 32385.57329 35656.71788 45256.11438 56896.29653 64476.10189 71996.00057 68907.70567 0.316839056 0.466401355 0.397588774 0.469984786 0.517456176 0.656764203 0.825688448 0.935687834 1.044817845 1 16.0723777 -7.172431589 0.900304762 1.037505471 0.396141006 0.976753061 0.038799756 0.075264036 0.121338127 0.02739331 0.017134458 6.72E-08 7.172431589 -0.641364464 down GTGQS(ph)DDSDIWDDTALIK ddPTM_A459_MK2206_30min_R1 2 GTGQSDDSDIWDDTALIK 18 0 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 GT(0.164)GQS(0.51)DDS(0.327)DIWDDTALIK;GTGQS(0.905)DDS(0.085)DIWDDT(0.01)ALIK 209.9 4.17E-30 2457500 2873.8 3328.5 2976 2854.3 2886.97 2856.85 3398.25 2812.11 2925.19 2852.43 TRUE FALSE 2629.368219 3111.814045 2773.997412 3074.138681 2771.975872 3018.602378 3171.558943 2787.524019 3229.273968 3205.810563 0.82018827 0.970679329 0.865302973 0.958927117 0.864672387 0.941603479 0.989315769 0.869522376 1.007319024 1 11.64647346 -1.522878746 0.064642772 1.103337397 0.540889205 0.313942761 0.053150412 385.138899 1.857430675 3.059920615 20.04181308 0.03 1.522878746 -0.562448192 GTGQS(ph)DDSDIWDDTALIK ddPTM_A459_MK2206_30min_R2 1 GTGQSDDSDIWDDTALIK 18 0 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 GT(0.398)GQS(0.501)DDS(0.101)DIWDDTALIK 90.755 0.012008 0 1258.8 1217.3 1197.7 2231.1 2448.8 642.61 890.39 1124.7 1059.7 2152.2 TRUE FALSE 1355.174696 1156.850652 1237.63072 2048.811993 2352.647808 667.0649738 773.4807234 1271.702152 1151.870791 2081.97389 0.650908593 0.555650893 0.594450644 0.984071896 1.130008315 0.320400259 0.371513172 0.61081561 0.553258999 1 11.02373626 -6.786197386 24.99987861 0.534393443 0.771080642 0.157127276 0.236971115 416.3042583 420368.2023 0.087456702 0.077162325 1.64E-07 6.786197386 0.236687198 GTGQSDDS(ph)DIWDDTALIK ddPTM_A459_MK2206_30min_R1 2 GTGQSDDSDIWDDTALIK 18 0 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 GTGQS(0.191)DDS(0.808)DIWDDT(0.002)ALIK;GTGQS(0.005)DDS(0.689)DIWDDT(0.305)ALIK 247.18 8.89E-33 30440900 4835.1 5528.1 5900.7 4530.4 5355.6 4800.9 6879.3 5751.9 5132.3 6038.4 TRUE FALSE 4423.849355 5168.219685 5500.176924 4879.332193 5142.275111 5072.722809 6420.394449 5701.611745 5665.820951 6786.48258 0.651861889 0.761546151 0.810460627 0.718978077 0.757723173 0.74747452 0.946056278 0.840142397 0.834868562 1 12.72844831 -7.378149812 0.044605246 1.649172866 5.86E-11 0.694143742 0.054839382 42.74920445 1.290993329 22.17336902 24.88232304 4.19E-08 7.378149812 -1.649172866 GTGQSDDSDIWDDT(ph)ALIK ddPTM_A459_MK2206_30min_R1 2 GTGQSDDSDIWDDTALIK 18 0 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 GTGQS(0.049)DDS(0.04)DIWDDT(0.912)ALIK;GTGQS(0.004)DDS(0.211)DIWDDT(0.784)ALIK 268.42 1.60E-53 32883200 7379.8 7702.7 7794.8 6489.8 6951.6 6969.5 8276.1 7635.2 7546.8 8134.9 TRUE FALSE 6752.109257 7201.25283 7265.710694 6989.64552 6674.703052 7364.107067 7724.01647 7568.446251 8331.316866 9142.712827 0.738523607 0.787649461 0.794699651 0.764504546 0.73005717 0.805461924 0.844827637 0.827811875 0.911252166 1 13.15840659 -8.323759259 0.684059306 1.001361438 0.764971376 0.901914667 0.024482232 0.209659872 0.225446659 0.025299334 0.010657969 4.75E-09 8.323759259 -0.236390062 GTGQSDDSDIWDDT(ph)ALIK ddPTM_A459_MK2206_30min_R2 1 GTGQSDDSDIWDDTALIK 18 0 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 GT(0.001)GQS(0.008)DDS(0.029)DIWDDT(0.962)ALIK 124.12 0.0020408 4099000 9270.1 8837.3 7559.7 11420 7537 5438.7 9963.5 9804.6 8008.6 6677.7 TRUE FALSE 9979.825983 8398.452533 7811.736625 10486.94947 7241.05951 5645.67354 8655.280482 11086.09488 8705.173552 6459.807196 1.544910812 1.300108854 1.209283248 1.623415243 1.1209405 0.873969357 1.339866689 1.71616498 1.347590305 1 12.65727539 -11.69443047 2.361892294 0.14640054 1.335661727 0.16054225 0.234100524 6600402.813 1809696.982 30112508.27 0.061837 2.02E-12 11.69443047 1.189261187 GTHDLWDSR ddPTM_A459_MK2206_30min_R2 2 GTHDLWDSR 9 0 E9PGM4;Q04446 E9PGM4 GBE1 "1,4-alpha-glucan-branching enzyme" 0 ; 145.46 0.0025982 6086900 22366.1 28103 26037 31850 28324 29656 30787 21793.3 26995.9 25542.1 FALSE TRUE 24078.46581 26707.44589 26905.06058 29247.75312 27211.85744 30784.57986 26744.62992 24641.75914 29343.95458 24708.66337 0.974494875 1.080893996 1.088891786 1.183704383 1.101308356 1.245902273 1.082398895 0.997292276 1.187597813 1 14.59272935 -4.660737224 1.781514104 1.117053999 0.894031471 0.227589194 0.074955128 1.865060153 4.715978713 0.020273269 0.779282183 2.18E-05 4.660737224 -0.223022528 GTHEMAGASGDKELGLGCS(ph)PPAETLADAK ddPTM_A459_MK2206_30min_R1 2 GTHEMAGASGDKELGLGCSPPAETLADAK 29 1 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 GTHEMAGASGDKELGLGCS(0.996)PPAET(0.004)LADAK;GTHEMAGAS(0.003)GDKELGLGCS(0.987)PPAET(0.01)LADAK 107.65 7.26E-11 11219300 2451.21 2218.32 2589.2 2117.07 2460.76 2236.23 2547.92 2685.46 2158.49 1994.25 TRUE FALSE 2242.721718 2073.906965 2413.452318 2280.127098 2362.742718 2362.84341 2377.952906 2661.981306 2382.87276 2241.312746 1.000628637 0.925309049 1.076803013 1.017317687 1.054178058 1.054222984 1.060964343 1.18768847 1.06315942 1 11.13012826 -5.596730648 0.699413954 1.086802127 0.948224338 0.299404204 0.053727003 1.400048654 1.0410857 0.027050261 0.131519446 2.53E-06 5.596730648 -0.138577789 GTHQLYSTSHDR ddPTM_A459_MK2206_30min_R2 2 GTHQLYSTSHDR 12 0 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 0 ; 87.719 0.015868 1504890 4570.7 8242.2 4589.1 9673.7 8335.5 9291 8767.2 6904.1 8547.6 6559.8 FALSE TRUE 4920.636306 7832.904333 4742.098304 8883.327765 8008.206387 9644.575516 7616.056109 7806.489575 9291.054797 6345.754263 0.775421818 1.234353555 0.747286785 1.399885246 1.261978648 1.51984699 1.20018138 1.230190967 1.464137187 1 12.63157594 -5.772788354 24.9995041 1.310035829 0.95055398 0.460883528 0.185808241 181.1302356 398993.4179 0.048871908 0.073213459 1.69E-06 5.772788354 -0.359481849 GTLDEEDEEADS(ph)DTDDIDHR ddPTM_A459_MK2206_30min_R2 2 GTLDEEDEEADSDTDDIDHR 20 0 Q9HCN4-3;Q9HCN4-2;Q9HCN4-4;Q9HCN4;Q9HCN4-5 Q9HCN4-3 GPN1 GPN-loop GTPase 1 1 GTLDEEDEEADS(0.997)DT(0.003)DDIDHR;GTLDEEDEEADS(0.977)DT(0.023)DDIDHR 104.97 0.0003357 67487000 69496 83121 85134 84160 90083 97753 89156 69076 83804 89963 TRUE FALSE 74816.66719 78993.33201 87972.32507 77283.85879 86545.88879 101473.0589 77449.7101 78104.47037 91093.12044 87027.51468 0.859689806 0.907682269 1.010856456 0.888039364 0.99446582 1.165988243 0.889945098 0.897468699 1.046716326 1 16.40918398 -4.546791309 0.963199018 0.987523231 0.731649866 0.214642299 0.080126925 5.116826113 2.799842159 0.02784197 1.517425431 2.84E-05 4.546791309 -0.255873365 GTLS(ph)DSEIETNSATSTIFGK ddPTM_A459_MK2206_30min_R1 1 GTLSDSEIETNSATSTIFGK 20 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;F8W8U2 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 GT(0.167)LS(0.416)DS(0.416)EIETNSATSTIFGK 69.649 0.0078618 4161400 2263.9 2237 2675.7 1904.7 2459.1 2635.3 2633.5 2343.8 2744.5 2220.6 TRUE FALSE 2071.343417 2091.370893 2494.080939 2051.400324 2361.14884 2784.508409 2457.82402 2323.308404 3029.800596 2495.704693 0.829963346 0.837988124 0.999349381 0.821972379 0.946085026 1.115720308 0.984821653 0.930922801 1.21400605 1 11.28523152 -6.545508315 6.693341451 1.040317378 0.879323065 0.482546335 0.086251 0.155458261 26.36062032 0.027855381 0.028346838 2.85E-07 6.545508315 -0.160994313 GTLS(ph)DSEIETNSATSTIFGK ddPTM_A459_MK2206_30min_R2 3 GTLSDSEIETNSATSTIFGK 20 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;F8W8U2 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 GT(0.013)LS(0.955)DS(0.032)EIETNSATSTIFGK;GT(0.039)LS(0.922)DS(0.039)EIETNSATSTIFGK;GT(0.047)LS(0.944)DS(0.009)EIETNSATSTIFGK 261.02 4.75E-97 5164700 42056.6 45659.1 44466 48976.7 47018.9 46162.3 45657.2 34583.1 41948.8 43397.9 TRUE FALSE 45276.48563 43391.73549 45948.47425 44975.14694 45172.70173 47919.03867 39662.3548 39103.22991 45597.4308 41981.83008 1.078478131 1.033583705 1.094484785 1.071300295 1.076006016 1.141423292 0.944750496 0.931432237 1.08612299 1 15.35747744 -7.269330836 24.99928281 0.98486245 1.080054704 0.48736732 0.046017395 522.9427086 1656619.038 0.018901589 0.012998047 5.38E-08 7.269330836 0.095192254 GTLSDS(ph)EIETNSATSTIFGK ddPTM_A459_MK2206_30min_R2 1 GTLSDSEIETNSATSTIFGK 20 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;F8W8U2 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 GTLS(0.494)DS(0.506)EIETNSATSTIFGK 214.34 2.21E-17 4273400 13582 20618 17696 21460 20580 19266 19021 15791 17436 17810 TRUE FALSE 14621.84836 19594.1401 18285.97581 19706.64935 19771.92579 19999.18113 16523.51985 17854.93792 18952.55176 17228.86116 0.848683394 1.137285855 1.061357198 1.143816133 1.147604918 1.160795304 0.95906048 1.036338836 1.100046694 1 14.07253972 -10.56041069 14.77392838 1 1.071506622 0.040150696 0.093684384 0 0 0.090083267 0.021848401 2.75E-11 10.56041069 0.071506623 GTLTLCPYHSDR ddPTM_A459_MK2206_30min_R2 1 GTLTLCPYHSDR 12 0 Q13200;Q13200-3;Q13200-2 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 85.672 0.043468 3305600 15970 22636 22743 26037 25693 23666 24708 13672 23443 22646 FALSE TRUE 17192.67548 21511.92916 23501.24027 23909.69381 24684.16372 24566.62621 21463.80992 15458.97734 25482.02976 21907.06287 0.784800572 0.981963181 1.07277002 1.091414853 1.126767375 1.121402095 0.979766664 0.705661796 1.163187868 1 14.41910845 -10.55737723 13.42762811 0.999999384 1.004792625 0 0.143077684 0 0 0.142519259 0.034565998 2.77E-11 10.55737723 0.004793241 GTNSS(ph)DSEELSAGESITK ddPTM_A459_MK2206_30min_R1 2 GTNSSDSEELSAGESITK 18 0 Q4LE39-2;Q4LE39;H7C5R6 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 GTNS(0.023)S(0.977)DSEELSAGESITK;GTNS(0.078)S(0.917)DS(0.004)EELSAGESITK 290.18 9.57E-81 9898200 4587.2 3956 4064.1 3927.2 4607.2 3746.8 4669.1 4133.3 4603.7 4096.7 TRUE FALSE 4197.034552 3698.463681 3788.240215 4229.673624 4423.685468 3958.940578 4357.632858 4097.162994 5082.27109 4604.230125 0.911560552 0.803275158 0.822773865 0.918649483 0.960787221 0.859848546 0.946441151 0.88986929 1.103826471 1 12.16874423 -7.617450513 0.608333158 1.032158861 0.85780817 0.474836662 0.060718891 0.69855666 0.52744307 0.057625224 0.034415631 2.41E-08 7.617450513 -0.174350691 GTNSS(ph)DSEELSAGESITK ddPTM_A459_MK2206_30min_R2 1 GTNSSDSEELSAGESITK 18 0 Q4LE39-2;Q4LE39;H7C5R6 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 GTNS(0.332)S(0.667)DSEELSAGESITK 157.42 2.09E-05 7121700 30117 40288 32128 40557 37616 34591 38451 31008 33454 39282 TRUE FALSE 32422.78068 38287.3565 33199.13148 37243.36336 36139.00683 35907.38474 33402.33751 35060.85207 36363.76845 38000.23156 0.853225871 1.007555874 0.873656031 0.980082537 0.951020701 0.944925419 0.879003526 0.922648379 0.956935444 1 15.21372059 -8.572292938 3.413138982 0.999885032 0.929297286 0.198399944 0.045705322 0.428743841 13.6907872 0.04125593 0.010896982 2.68E-09 8.572292938 -0.070587746 GTNTSS(ph)PYDAGADYLR ddPTM_A459_MK2206_30min_R1 2 GTNTSSPYDAGADYLR 16 0 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 GTNT(0.001)S(0.097)S(0.901)PYDAGADYLR;GTNTS(0.118)S(0.882)PYDAGADYLR 185.74 7.78E-07 24893000 7980.9 7340.6 6903.1 5994.6 8406.6 6679.1 8749.1 7077.4 6687.4 6130.6 TRUE FALSE 7302.082546 6862.725606 6434.536805 6456.305131 8071.747321 7057.26487 8165.463503 7015.523038 7382.579161 6890.105012 1.059792635 0.996026272 0.933880804 0.937040164 1.171498447 1.024260858 1.185100008 1.018202629 1.071475565 1 12.75031026 -6.244126819 24.98725768 1.081958807 0.979294764 0.339608138 0.065942582 905.3888913 1306749.85 0.019014637 0.024488005 5.70E-07 6.244126819 -0.102664043 GTNTSS(ph)PYDAGADYLR ddPTM_A459_MK2206_30min_R2 2 GTNTSSPYDAGADYLR 16 0 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 GTNT(0.039)S(0.039)S(0.923)PYDAGADYLR;GTNT(0.004)S(0.097)S(0.899)PYDAGADYLR 194.94 1.23E-06 23135000 53429 67203 56384 65462 55695 71657 63137 47138 53705 63061 TRUE FALSE 57519.56532 63865.79674 58263.81442 60113.5452 53508.13446 74383.95735 54847.03606 53299.09845 58376.16382 61003.32473 0.942892303 1.046923213 0.955092442 0.985414245 0.877134725 1.219342678 0.899082735 0.873708092 0.956934136 1 15.89660025 GTPAGT(ph)TPGASQAPK ddPTM_A459_MK2206_30min_R1 1 GTPAGTTPGASQAPK 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 GT(0.001)PAGT(0.491)T(0.491)PGAS(0.016)QAPK 153.14 0.00049914 3244100 1791.5 1899.1 1658.3 1696.5 1754.2 1565.5 1982.1 1569.9 1178 1450.7 TRUE FALSE 1639.123517 1775.468245 1545.739216 1827.164724 1684.326499 1654.137257 1849.877726 1556.17453 1300.457316 1630.423668 1.005335944 1.08896128 0.948059849 1.12066867 1.033060629 1.014544434 1.134599406 0.954460218 0.797619257 1 10.67103118 -7.990737304 18.10485114 0.891219349 1.04750245 0.443949849 0.069436201 5.250892306 10263.85812 0.035291648 0.016825711 1.02E-08 7.990737304 0.156283101 GTPAGT(ph)TPGASQAPK ddPTM_A459_MK2206_30min_R2 1 GTPAGTTPGASQAPK 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 GTPAGT(0.911)T(0.086)PGAS(0.003)QAPK 96.135 0.024249 6111200 30733 30328 26696 32580 32510 28485 30331 24839 24743 31470 TRUE FALSE 33085.94211 28821.95562 27586.03132 29918.10978 31233.49405 29569.01664 26348.50327 28085.54259 26895.10141 30443.13648 1.086811214 0.946747246 0.906149448 0.982753857 1.025961766 0.971286801 0.86549897 0.922557457 0.883453695 1 14.89382938 -7.099114466 7.285884699 0.911745795 0.983848287 0.269337155 0.055354847 0.36977601 23.81598981 0.021253678 0.016464663 7.96E-08 7.099114466 0.072102492 GTPAGTT(ph)PGASQAPK ddPTM_A459_MK2206_30min_R1 1 GTPAGTTPGASQAPK 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 GTPAGT(0.038)T(0.961)PGAS(0.002)QAPK 132.31 0.0014854 3501600 2239.1 2421.1 2535.5 2345.9 2476.7 2395.6 2383.2 2596 1964.8 2065.5 TRUE FALSE 2048.652787 2263.48595 2363.397324 2526.581624 2378.047795 2531.236802 2224.221076 2573.303446 2169.047991 2321.389734 0.88251135 0.975056414 1.01809588 1.088391832 1.024406958 1.090397172 0.958142032 1.108518491 0.934374767 1 11.18077304 -4.841973066 1.9537891 1.033723853 0.8491081 0.407069108 0.053642493 0.597819341 2.750683496 0.013431236 0.193502295 1.44E-05 4.841973066 -0.184615753 GTPAGTT(ph)PGASQAPK ddPTM_A459_MK2206_30min_R2 1 GTPAGTTPGASQAPK 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 GTPAGT(0.044)T(0.912)PGAS(0.044)QAPK 110.38 0.0082174 5214000 21676 18175 16673 21903 15995 14727 16320 15273 14487 22016 TRUE FALSE 23335.53123 17272.45593 17228.8695 20113.45484 15366.95593 15287.4463 14177.1644 17269.23354 15747.05307 21297.61972 1.095687289 0.811004054 0.808957514 0.944399191 0.721533962 0.717800698 0.665668961 0.810852751 0.739380892 1 14.37840458 -4.757423386 4.514977707 0.789865656 1.12254979 0.442066975 0.09832923 0.192945905 8.661192739 0.024556974 0.210432261 1.75E-05 4.757423386 0.332684134 GTPEDGACEGS(ph)PLEEK ddPTM_A459_MK2206_30min_R2 1 GTPEDGACEGSPLEEK 16 0 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 GTPEDGACEGS(1)PLEEK 140.8 0.0003986 5526900 18903 22478 22728 22553 20816 17066 23572 18825 19782 18600 TRUE FALSE 20350.22821 21361.77521 23485.74018 20710.34776 19998.65925 17715.45859 20476.96808 21285.49214 21502.6026 17993.08352 1.13100282 1.187221478 1.305264889 1.151017152 1.111463703 0.984570464 1.138046631 1.1829819 1.195048229 1 14.13515483 -5.994128576 24.96840815 1.109291476 1.209497601 0.280824103 0.075461953 219.9315693 935250.7846 0.022343757 0.033035448 1.01E-06 5.994128576 0.100206125 GTPGPDS(ph)SGSLGSGEFTGVK ddPTM_A459_MK2206_30min_R1 1 GTPGPDSSGSLGSGEFTGVK 20 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 GT(0.032)PGPDS(0.738)S(0.225)GS(0.004)LGSGEFTGVK 176.68 4.33E-13 5943600 1679.9 1986.1 1859.5 1270 1761.2 1707.5 2130.5 1832.9 2325.1 2191.8 TRUE FALSE 1537.015683 1856.804529 1733.282321 1367.81562 1691.047675 1804.177174 1988.378232 1816.875149 2566.802465 2463.336731 0.623956792 0.753776171 0.703631907 0.555269445 0.686486607 0.732411916 0.807188967 0.737566702 1.04200227 1 11.26639814 -8.032772512 1.065396756 1.029045117 0.673271655 0.763251825 0.070423056 0.24166211 0.510279231 0.065055548 0.023239434 9.27E-09 8.032772512 -0.355773461 GTPGPDS(ph)SGSLGSGEFTGVK ddPTM_A459_MK2206_30min_R2 1 GTPGPDSSGSLGSGEFTGVK 20 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 GT(0.012)PGPDS(0.635)S(0.2)GS(0.123)LGS(0.026)GEFT(0.003)GVK 59.225 0.033073 10797000 11987 18129 12311 18797 17472 17186 16615 18221 14052 21165 TRUE FALSE 12904.73394 17228.74022 12721.4426 17261.22497 16785.96149 17840.02527 14433.43054 20602.54726 15274.21756 20474.38778 0.630286682 0.841477675 0.621334456 0.843064279 0.819851693 0.871333759 0.704950531 1.006259502 0.746015838 1 14.32153269 -2.564410962 0.067001012 1.228230804 2.39E-10 0.377826657 0.100876839 234.8397214 1.428897192 5.604742476 28.60210719 0.002726397 2.564410962 -1.228230804 GTPGPDSSGSLGS(ph)GEFTGVK ddPTM_A459_MK2206_30min_R1 1 GTPGPDSSGSLGSGEFTGVK 20 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 GTPGPDSS(0.004)GS(0.008)LGS(0.988)GEFTGVK 171.33 1.54E-09 3879600 950.06 1128.5 833.3 858.65 970.45 1086.1 878 1033.5 776.3 1052.6 TRUE FALSE 869.252408 1055.034445 776.7379177 924.7833718 931.7949215 1147.594043 819.430222 1024.464218 856.999163 1183.004035 0.734783976 0.891826582 0.656580954 0.781724613 0.787651516 0.970067734 0.692669 0.865985397 0.724426239 1 10.20823928 -6.540484958 24.98553805 0.837545475 0.769533205 0.125995098 0.103738916 613.3079278 870359.1767 0.032627453 0.032633918 2.88E-07 6.540484958 -0.068012269 GTPGS(ph)PSGTQEPR ddPTM_A459_MK2206_30min_R1 3 GTPGSPSGTQEPR 13 0 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 GT(0.011)PGS(0.961)PS(0.026)GT(0.001)QEPR;GT(0.005)PGS(0.944)PS(0.041)GT(0.011)QEPR;GT(0.002)PGS(0.935)PS(0.035)GT(0.028)QEPR 172.58 0.00017208 23008000 4554 5122.1 5173 4567.9 4765.9 4668.01 5533 5217.31 4542.7 3703.19 TRUE FALSE 4166.658386 4788.650359 4821.871173 4919.720449 4576.064111 4932.308692 5163.903666 5171.695609 5014.929921 4161.969135 1.001126691 1.150573251 1.158555246 1.182065578 1.099494966 1.185090166 1.240735695 1.242607872 1.204941641 1 12.02305055 -3.963754605 1.348369028 1.1765673 3.10E-14 0.322449842 0.068500242 11.21125036 3.479002245 0.019322839 30.64645641 0.000108704 3.963754605 -1.1765673 GTPGS(ph)PSGTQEPR ddPTM_A459_MK2206_30min_R2 2 GTPGSPSGTQEPR 13 0 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 GT(0.312)PGS(0.577)PS(0.042)GT(0.069)QEPR;GT(0.089)PGS(0.554)PS(0.277)GT(0.079)QEPR 135.81 0.0011272 17396900 17898.5 22624.3 18971.1 26781 23071 29220 24167 17082.9 21577.1 20367.5 TRUE FALSE 19268.82292 21500.81016 19603.58701 24592.90663 22165.11662 30331.98758 20993.84387 19315.69368 23453.83716 19702.91014 0.97796837 1.09125048 0.994958961 1.248186509 1.12496664 1.539467386 1.065519952 0.980347245 1.190374264 1 14.26612111 -5.751178257 24.9950985 1.173203637 1.028378364 0.155279659 0.151259058 409.2436612 996868.3958 0.042552418 0.072659479 1.77E-06 5.751178257 -0.144825272 GTPKPPGPPAQPPGPPNAS(ph)SNPDLR ddPTM_A459_MK2206_30min_R1 1 GTPKPPGPPAQPPGPPNASSNPDLR 25 1 Q8N4C8;Q8N4C8-4 Q8N4C8;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 GTPKPPGPPAQPPGPPNAS(0.5)S(0.5)NPDLR 135.02 5.29E-09 0 1030.1 1025.7 914.2 817.92 1180.3 1133.1 1544.9 1381.2 1292.4 1770.2 TRUE FALSE 942.4845857 958.9267436 852.1466511 880.9163401 1133.286152 1197.255143 1441.84254 1369.124314 1426.749605 1989.50574 0.473728005 0.481992449 0.42832078 0.442781502 0.569632009 0.601785217 0.724723991 0.688173091 0.717137717 1 10.95819435 -8.086098975 0.314762462 1.039910104 0.390493612 0.936321945 0.04225508 0.367661772 0.126559831 0.088466384 0.072763942 8.20E-09 8.086098975 -0.649416492 down GTPKPPGPPAQPPGPPNASS(ph)NPDLR ddPTM_A459_MK2206_30min_R1 1 GTPKPPGPPAQPPGPPNASSNPDLR 25 1 Q8N4C8;Q8N4C8-4 Q8N4C8;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 GTPKPPGPPAQPPGPPNAS(0.4)S(0.6)NPDLR 106.42 1.64E-07 12237000 1736.9 1443.3 1198.6 1231.8 2018.5 1861.4 2203.5 2497.2 2476.3 2556.8 TRUE FALSE 1589.167534 1349.340908 1117.242371 1326.673449 1938.098871 1966.790859 2056.508536 2475.367244 2733.720247 2873.555687 0.553031751 0.469571867 0.388801364 0.46168357 0.674460175 0.684445013 0.715666846 0.861430059 0.951337139 1 11.48862129 -7.301919097 0.648619205 1.003494244 0.44924868 0.914308679 0.058762843 0.217653294 0.183400291 0.057067718 0.038634572 4.99E-08 7.301919097 -0.554245564 GTPLT(ph)PPACACSSLQVEVER ddPTM_A459_MK2206_30min_R2 1 GTPLTPPACACSSLQVEVER 20 0 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 GT(0.054)PLT(0.946)PPACACSSLQVEVER 117.29 0.00061587 8486500 12345 17171 16627 16722 16750 19413 14145 12651 18461 15252 TRUE FALSE 13290.14269 16318.31311 17181.33588 15355.75911 16092.31084 20151.77532 12287.74451 14304.52914 20066.70441 14754.32849 0.900762288 1.106001749 1.164494602 1.040762995 1.090684056 1.365821246 0.832823027 0.969514075 1.360055419 1 13.84885064 -4.760669882 24.10856105 1.101705375 0.900761965 0.131211651 0.156337638 26.09312814 816643.896 0.038237924 0.223099331 1.74E-05 4.760669882 -0.20094341 GTPPLTPSDS(ph)PQTR ddPTM_A459_MK2206_30min_R1 1 GTPPLTPSDSPQTR 14 0 Q6NZY4;Q6NZY4-2 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 GTPPLTPS(0.001)DS(0.996)PQT(0.004)R 181.75 7.52E-05 8718400 1169.2 1211.7 1370.9 893.63 1295.6 1440.3 1927.2 1502.5 1333.1 1542.4 TRUE FALSE 1069.7534 1132.81811 1277.847128 962.4575374 1243.993509 1521.848541 1798.640004 1489.363801 1471.680516 1733.484157 0.617111726 0.653492047 0.737155354 0.555215653 0.71762612 0.877913153 1.037586642 0.859173587 0.848972579 1 10.75945894 -6.732142117 3.226254348 0.928082554 0.647684192 0.799217876 0.068407493 0.11005234 2.36479526 0.024726659 0.023435241 1.85E-07 6.732142117 -0.280398362 GTPPLTPSDS(ph)PQTR ddPTM_A459_MK2206_30min_R2 2 GTPPLTPSDSPQTR 14 0 Q6NZY4;Q6NZY4-2 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 GTPPLTPSDS(0.96)PQT(0.04)R;GTPPLTPS(0.02)DS(0.973)PQT(0.007)R 257.81 1.19E-35 26330000 26591 36092 30892 42857 35349 38588 52718 49407 51959 57464 TRUE FALSE 28626.82741 34299.72376 31921.92386 39355.44601 33961.02065 40056.49338 45796.06327 55864.66454 56478.2999 55588.95439 0.514973302 0.617024086 0.574249403 0.70797241 0.610931093 0.720583681 0.823833867 1.004959801 1.015998601 1 15.76251063 -7.385302962 1.169521324 1.032129218 0.599952191 0.931330521 0.047507609 0.115230383 0.300377375 0.0340031 0.017477424 4.12E-08 7.385302962 -0.432177027 GTPPPVFT(ph)PPLPK ddPTM_A459_MK2206_30min_R2 1 GTPPPVFTPPLPK 13 0 Q6NZY4;Q6NZY4-2 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 GT(0.002)PPPVFT(0.998)PPLPK 138.31 0.0023266 6403200 43727 58235 48366 47266 46566 48185 48364 42394 43424 47473 TRUE FALSE 47074.77274 55343.13458 49978.4983 43404.2166 44737.58486 50018.71394 42013.7487 47935.04136 47200.94103 45923.9599 1.025059094 1.205103713 1.088288083 0.945132273 0.974166535 1.089163784 0.91485466 1.043791552 1.027806425 1 15.48695943 -5.5928874 6.49447143 1.000753419 1.122741671 0.390303885 0.061601079 0.181733873 13.14839054 0.016077907 0.028163255 2.55E-06 5.5928874 0.121988252 GTPSQS(ph)PVVGR ddPTM_A459_MK2206_30min_R1 5 GTPSQSPVVGR 11 0 P52594-2;P52594-3;P52594;P52594-4;C9J2I0;B8ZZY2 P52594-2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 1 GTPS(0.005)QS(0.995)PVVGR;GT(0.002)PS(0.017)QS(0.981)PVVGR;GT(0.008)PS(0.06)QS(0.931)PVVGR;GT(0.002)PS(0.05)QS(0.948)PVVGR;GT(0.001)PS(0.022)QS(0.977)PVVGR 140.33 0.0010954 584746000 14653.7 16225.7 15078.3 13135.6 21914.9 19118.9 23144.2 15760.6 15554.2 13148.2 TRUE FALSE 13407.32587 15169.40398 14054.82701 14147.30619 21041.98313 20201.3956 21600.29265 15622.80674 17171.11475 14777.09828 0.907304371 1.026548223 0.951122253 0.95738053 1.42395907 1.367074592 1.461741151 1.057231023 1.162008564 1 13.85107538 -6.24133476 23.99540611 1.265104492 0.964623977 0.482925072 0.143448295 426.8134749 509412.6281 0.043943522 0.056643132 5.74E-07 6.24133476 -0.300480516 GTPSQS(ph)PVVGR ddPTM_A459_MK2206_30min_R2 6 GTPSQSPVVGR 11 0 P52594-2;P52594-3;P52594;P52594-4;C9J2I0;B8ZZY2 P52594-2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 1 GT(0.001)PS(0.122)QS(0.877)PVVGR;GT(0.006)PS(0.109)QS(0.885)PVVGR;GT(0.003)PS(0.063)QS(0.934)PVVGR;GT(0.003)PS(0.021)QS(0.976)PVVGR;GT(0.098)PS(0.153)QS(0.749)PVVGR;GT(0.019)PS(0.259)QS(0.722)PVVGR 108.23 0.010089 1380747000 157944 225776 178805 256832 217494 531179 242013 211919 363382 186541 TRUE FALSE 170036.3141 214564.2921 184766.2695 235848.004 208954.0927 551393.3891 210236.4024 239617.5409 394988.3095 180454.1824 0.942268623 1.189023658 1.023895744 1.306968898 1.157934329 3.05558664 1.165040342 1.327858062 2.188856496 1 17.46127306 -6.575873669 24.99999863 1.77324679 1.128998111 0.24025889 0.553580602 140.0396652 66061.70754 0.178876923 0.178876947 2.66E-07 6.575873669 -0.644248678 GTQEVAPPTPLTPT(ph)SHTANTSPRPVSGMER ddPTM_A459_MK2206_30min_R2 2 GTQEVAPPTPLTPTSHTANTSPRPVSGMER 30 1 P48730-2;H7BYT1;P48730 P48730-2 CSNK1D Casein kinase I isoform delta 1 GTQEVAPPTPLT(0.008)PT(0.204)S(0.204)HT(0.204)ANT(0.172)S(0.172)PRPVS(0.037)GMER;GTQEVAPPT(0.008)PLT(0.097)PT(0.369)S(0.369)HT(0.097)ANT(0.027)S(0.027)PRPVS(0.007)GMER 56.903 0.0060869 44862000 37756 49423 43422 45487 46931 49199 51765 46832 41700 49058 TRUE FALSE 40646.62839 46968.72569 44869.66781 41770.56659 45088.25313 51071.30242 44968.19332 52953.1032 45326.99062 47457.24148 0.856489487 0.989706191 0.945475683 0.880172663 0.950081626 1.076154046 0.947551773 1.115806599 0.955112207 1 15.53434062 -6.585121248 7.24449997 1.021332403 0.92381703 0.40717995 0.057857143 0.221469924 21.40460716 0.018010327 0.018024186 2.60E-07 6.585121248 -0.097515373 GTQEVAPPTPLTPTS(ph)HTANTSPRPVSGMER ddPTM_A459_MK2206_30min_R2 1 GTQEVAPPTPLTPTSHTANTSPRPVSGMER 30 1 P48730-2;H7BYT1;P48730 P48730-2 CSNK1D Casein kinase I isoform delta 1 GTQEVAPPTPLT(0.001)PT(0.064)S(0.218)HT(0.218)ANT(0.218)S(0.218)PRPVS(0.064)GMER 77.322 1.55E-05 30784000 12777 14226 13420 19688 14499 17617 17425 13140 11664 17838 TRUE FALSE 13755.21694 13519.55753 13867.4161 18079.42742 13929.69641 18287.42728 15137.07657 14857.44312 12678.51364 17255.94752 0.797129044 0.783472337 0.803631101 1.047721512 0.807240309 1.059775318 0.877209238 0.86100419 0.734732974 1 14.07480607 -5.559792801 24.99941245 0.908447452 0.791113115 0.235794427 0.097170018 235.4586767 159459.3411 0.025945744 0.044939506 2.76E-06 5.559792801 -0.117334337 GTQEVAPPTPLTPTSHT(ph)ANTSPRPVSGMER ddPTM_A459_MK2206_30min_R1 1 GTQEVAPPTPLTPTSHTANTSPRPVSGMER 30 1 P48730-2;H7BYT1;P48730 P48730-2 CSNK1D Casein kinase I isoform delta 1 GTQEVAPPT(0.001)PLT(0.004)PT(0.023)S(0.023)HT(0.311)ANT(0.311)S(0.311)PRPVS(0.016)GMER 61.499 0.0027013 14674000 1555.3 1589.7 1639.2 1040.3 1487.5 1754.2 1883.3 1635.1 1532.8 1519.9 TRUE FALSE 1423.013568 1486.210241 1527.935671 1120.424086 1428.249725 1853.521288 1757.668493 1620.804493 1692.140045 1708.196687 0.833050186 0.87004632 0.894472916 0.655910467 0.836115499 1.085074864 1.028961423 0.948839502 0.990600238 1 10.73825839 -6.684803528 7.211457174 1.008267627 0.814537817 0.671764445 0.067424857 0.147114929 11.58740711 0.023677831 0.02359799 2.07E-07 6.684803528 -0.19372981 GTQEVAPPTPLTPTSHTANT(ph)SPRPVSGMER ddPTM_A459_MK2206_30min_R2 1 GTQEVAPPTPLTPTSHTANTSPRPVSGMER 30 1 P48730-2;H7BYT1;P48730 P48730-2 CSNK1D Casein kinase I isoform delta 1 GTQEVAPPTPLT(0.001)PT(0.094)S(0.078)HT(0.078)ANT(0.399)S(0.329)PRPVS(0.02)GMER 69.356 0.00042116 12557000 33490 44981 37245 47136 41365 48785 45452 40103 38927 43629 TRUE FALSE 36054.02015 42747.30895 38486.72971 43284.83802 39740.80226 50641.54736 39484.0978 45344.59979 42312.8001 42205.3893 0.854251572 1.012840058 0.911891357 1.025576087 0.941604921 1.199883432 0.935522654 1.074379375 1.002544954 1 15.36513961 -3.109107009 0.539632877 1.033401059 2.14E-16 0.271211032 0.077639904 29.17640505 1.532719362 0.038091952 28.08283871 0.000777845 3.109107009 -1.033401059 GTQEVAPPTPLTPTSHTANTS(ph)PRPVSGMER ddPTM_A459_MK2206_30min_R1 1 GTQEVAPPTPLTPTSHTANTSPRPVSGMER 30 1 P48730-2;H7BYT1;P48730 P48730-2 CSNK1D Casein kinase I isoform delta 1 GTQEVAPPTPLT(0.001)PT(0.013)S(0.013)HT(0.029)ANT(0.211)S(0.708)PRPVS(0.026)GMER 68.961 0.00017883 11816000 2092.1 1700.5 1788.1 1495.9 2057.2 1825.8 2254 1858.8 1701.7 1550.7 TRUE FALSE 1914.155909 1589.797141 1666.728754 1611.114477 1975.257368 1929.175218 2103.639773 1842.548708 1878.597805 1742.812423 1.098314359 0.912202093 0.956344316 0.924433666 1.133373472 1.106932216 1.207037398 1.057227205 1.077911644 1 10.76720159 -6.265339574 24.91186114 1.105932135 0.967316406 0.434215502 0.068929391 274.3127851 1752124.895 0.02073415 0.024400775 5.43E-07 6.265339574 -0.138615728 GTQEVAPPTPLTPTSHTANTSPRPVS(ph)GMER ddPTM_A459_MK2206_30min_R2 2 GTQEVAPPTPLTPTSHTANTSPRPVSGMER 30 1 P48730-2;H7BYT1;P48730 P48730-2 CSNK1D Casein kinase I isoform delta 1 GTQEVAPPTPLT(0.003)PT(0.042)S(0.042)HT(0.182)ANT(0.182)S(0.182)PRPVS(0.366)GMER;GTQEVAPPTPLT(0.009)PT(0.141)S(0.141)HT(0.038)ANT(0.141)S(0.141)PRPVS(0.388)GMER 57.21 0.0018382 16592600 34957 48909 44215 60274 54620 54073 51626 51236 52386 49667 TRUE FALSE 37633.3348 46480.25018 45689.10603 55349.42139 52475.34436 56130.78591 44847.44419 57932.72112 56942.43959 48046.36986 0.783271138 0.967403996 0.950937733 1.152000069 1.092181251 1.168262786 0.933420034 1.205766873 1.185155918 1 15.55213981 -4.713307665 0.904615796 1.110069263 0.588231264 0.561990826 0.086845388 1.786576186 1.053204828 0.030030682 0.952381977 1.94E-05 4.713307665 -0.521837999 GTQSIPNDS(ph)PAR ddPTM_A459_MK2206_30min_R1 4 GTQSIPNDSPAR 12 0 J3QRX6;H9KV77;Q9NQ92 J3QRX6 COPRS Coordinator of PRMT5 and differentiation stimulator 1 GTQSIPNDS(1)PAR;GTQSIPNDS(1)PAR;GTQSIPNDS(1)PAR;GTQSIPNDS(1)PAR 218.45 4.24E-08 220053400 18694.4 18860.6 17759.8 13587.9 18155.1 17932.5 23856.8 17419 19711.6 24240.2 TRUE FALSE 17104.34311 17632.77151 16554.31426 14634.44241 17431.94392 18947.82265 22265.3564 17266.70752 21760.69136 27243.25898 0.627837629 0.647234295 0.607648089 0.537176643 0.639862651 0.695504993 0.817279475 0.63379743 0.798755075 1 14.73361168 -9.063361222 0.330226502 1.060694131 0.589451876 0.782283981 0.059855201 1.50041544 0.323633267 0.214835987 0.06901998 8.64E-10 9.063361222 -0.471242255 GTQSIPNDS(ph)PAR ddPTM_A459_MK2206_30min_R2 3 GTQSIPNDSPAR 12 0 J3QRX6;H9KV77;Q9NQ92 J3QRX6 COPRS Coordinator of PRMT5 and differentiation stimulator 1 GTQSIPNDS(1)PAR;GTQSIPNDS(1)PAR;GTQSIPNDS(1)PAR 166.64 0.0004619 315487000 114814 94944 105966 113543 101468 106932 105905 93390 94511 113584 TRUE FALSE 123604.2481 90229.21902 109498.8536 104266.1737 97483.85648 111001.3722 91999.54629 105596.3937 102731.3959 109877.7634 1.124925047 0.821178155 0.996551533 0.948928796 0.887202774 1.010225989 0.837289943 0.961035158 0.934960749 1 16.74553992 -4.738525063 24.93027931 0.932292305 1.124925866 0.457410831 0.06269144 1641.801813 1786149.834 0.014371964 0.796808553 1.83E-05 4.738525063 0.192633561 GTQSTEGS(ph)PVSK ddPTM_A459_MK2206_30min_R1 4 GTQSTEGSPVSK 12 0 A0A087WXK8;Q9H4H8-2;Q9H4H8 A0A087WXK8 FAM83D Protein FAM83D 1 GTQS(0.001)T(0.001)EGS(0.995)PVS(0.004)K;GTQS(0.001)T(0.001)EGS(0.761)PVS(0.237)K;GTQS(0.002)T(0.002)EGS(0.988)PVS(0.009)K;GTQST(0.004)EGS(0.98)PVS(0.016)K 152 0.00050742 46795200 17407.1 16936.6 14789.6 14080.1 14555.2 13994.7 16756.5 16506 8135.3 14336.2 TRUE FALSE 15926.53474 15834.02426 13785.72316 15164.55174 13975.43556 14787.06782 15638.70446 16361.68978 8980.993547 16112.27669 0.988472023 0.982730409 0.855603676 0.941179948 0.867378077 0.917751607 0.970607988 1.015479693 0.557400653 1 13.97587274 -8.209748085 24.99999893 0.778696051 0.938428733 0.25991034 0.110331254 379.0843586 183340.8281 0.06871662 0.025972377 6.17E-09 8.209748085 0.159732681 GTQSTEGS(ph)PVSK ddPTM_A459_MK2206_30min_R2 3 GTQSTEGSPVSK 12 0 A0A087WXK8;Q9H4H8-2;Q9H4H8 A0A087WXK8 FAM83D Protein FAM83D 1 GTQST(0.011)EGS(0.97)PVS(0.019)K;GTQST(0.012)EGS(0.979)PVS(0.009)K;GTQS(0.002)T(0.004)EGS(0.951)PVS(0.043)K 156.96 0.00044022 26485000 73852 82237 73589 83514 82117 77376 103257 77879 75305 89143 TRUE FALSE 79506.1659 78153.23016 76042.42053 76690.63905 78892.67398 80320.5979 89699.23187 88058.0527 81854.89278 86234.27121 0.921978754 0.906289681 0.881812062 0.88932901 0.914864507 0.931423166 1.040180784 1.021149149 0.949215337 1 16.39597372 -7.075645567 4.109805703 1.004008792 0.90240911 0.790723855 0.024254328 0.10428855 3.317622577 0.009898633 0.007712311 8.40E-08 7.075645567 -0.101599682 GTS(ph)PRPPEGGLGYSQLGDDDLK ddPTM_A459_MK2206_30min_R2 2 GTSPRPPEGGLGYSQLGDDDLK 22 1 Q9UQ88-8;P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;P21127-10;P21127-5;P21127-4;P21127-12;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 Q9UQ88-8;P21127;Q5QPR4 CDK11A;CDK11B Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B 1 GT(0.206)S(0.793)PRPPEGGLGYSQLGDDDLK;GT(0.246)S(0.754)PRPPEGGLGYSQLGDDDLK 105.68 3.55E-05 67498000 106404 73568 75907 69038 69429 46075 98200 73181 55930 87477 TRUE FALSE 114550.3721 69914.7201 78437.70149 63397.37456 66702.86861 47828.41641 85306.22204 82746.00797 60794.6903 84622.63265 1.353661171 0.826194103 0.92691162 0.749177526 0.78823911 0.565196507 1.008078092 0.977823608 0.718421165 1 16.36875595 -4.760901381 24.99999998 0.834235957 1.353661762 0.565641439 0.134950219 9.702398287 450446.6689 0.033853716 0.194724 1.73E-05 4.760901381 0.519425805 GTSS(ph)PDYR ddPTM_A459_MK2206_30min_R2 1 GTSSPDYR 8 0 Q66K14;Q66K14-2;G3V133 Q66K14 TBC1D9B TBC1 domain family member 9B 1 GT(0.007)S(0.11)S(0.882)PDYR 131.22 0.0036226 54695000 144590 170150 160060 184990 181470 171670 188370 153800 174000 150100 TRUE FALSE 155659.9216 161700.5984 165396.3205 169875.7252 174344.576 178203.0221 163636.7927 173902.1881 189134.2055 145202.2493 1.072021421 1.113623234 1.139075471 1.169924888 1.20070162 1.227274529 1.126957699 1.197654919 1.302556995 1 17.14770428 -5.277771204 1.276452647 1.185723307 1.067984176 0.165656306 0.073523521 1.084129422 2.675139337 0.022187914 0.132540412 5.28E-06 5.277771204 -0.117739132 GTT(ph)PPPPSWEPNSQTK ddPTM_A459_MK2206_30min_R1 2 GTTPPPPSWEPNSQTK 16 0 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 GTT(1)PPPPSWEPNSQTK;GT(0.008)T(0.992)PPPPSWEPNSQTK 236.05 1.33E-16 15132100 4785.5 5033.4 5354.3 4354.1 4648.1 4718.1 6089 4283.1 5265 5187.3 TRUE FALSE 4378.468095 4705.724745 4990.865034 4689.453536 4462.956334 4985.234745 5682.81392 4245.653308 5812.315591 5829.941886 0.751031173 0.807164949 0.856074577 0.804373976 0.765523297 0.855108823 0.974763391 0.728249679 0.996976592 1 12.50926579 -8.458825288 0.286124116 1.033588731 0.770930886 0.441121891 0.072960162 2.106951787 0.555760585 0.201471225 0.124460111 3.48E-09 8.458825288 -0.262657845 GTT(ph)PPPPSWEPNSQTK ddPTM_A459_MK2206_30min_R2 4 GTTPPPPSWEPNSQTK 16 0 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 GT(0.075)T(0.925)PPPPSWEPNSQTK;GTT(1)PPPPSWEPNSQTK;GT(0.02)T(0.98)PPPPSWEPNSQTK;GT(0.003)T(0.997)PPPPSWEPNSQTK 232.78 3.85E-15 42414700 130405 139166 140724 144889 143329 133631 155457 118180 115654 156332 TRUE FALSE 140388.9071 132255.2188 145415.6679 133051.1052 137701.1833 138716.4213 135045.3092 133626.5318 125713.3759 151230.8996 0.928308351 0.874525108 0.961547331 0.879787831 0.910536032 0.917249198 0.892974316 0.883592785 0.831267791 1 17.20639342 -7.278180401 20.18633193 0.892258082 0.911011714 0 0.045389531 273.0655158 329251.1079 0.017789372 0.012068181 5.27E-08 7.278180401 0.018753632 GTTATSAQANSTPTSVASVVTSAES(ph)PASR ddPTM_A459_MK2206_30min_R1 2 GTTATSAQANSTPTSVASVVTSAESPASR 29 0 Q86YP4-2;Q86YP4;Q86YP4-3 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 GTTATSAQANSTPT(0.001)S(0.001)VAS(0.032)VVT(0.184)S(0.017)AES(0.631)PAS(0.136)R;GTTATSAQANSTPTSVAS(0.005)VVT(0.025)S(0.046)AES(0.862)PAS(0.062)R 108.85 7.24E-11 15685500 1687.28 1707.28 1869.93 1580.72 1910.12 1883.66 2077.6 1645.6 1502.44 1246.5 TRUE FALSE 1543.767976 1596.135762 1743.004362 1702.467328 1834.035876 1990.311201 1939.007095 1631.212693 1658.624015 1400.925831 1.101962675 1.139343516 1.24418033 1.215244441 1.309159868 1.420711331 1.384089759 1.164381909 1.183948485 1 10.45216486 -5.189166227 1.700891094 1.263770736 1.090171183 0.132057502 0.113667748 0.847312893 3.978444122 0.033633999 0.184215484 6.47E-06 5.189166227 -0.173599553 GTVPDDAVEALADS(ph)LGKK ddPTM_A459_MK2206_30min_R1 2 GTVPDDAVEALADSLGKK 18 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7EVY3;E7ES10;E9PDE4;H0Y9H6;A0A0A0MR45;H0Y7F0;E7EQA0;H0YD33;E7EQ12;P20810-5;E9PCH5;P20810-2;P20810-3 P20810-6;P20810-5 CAST Calpastatin 1 GTVPDDAVEALADS(1)LGKK;GTVPDDAVEALADS(1)LGKK 167.89 6.31E-08 6276200 2124.3 2233.5 2383.1 2502.75 1680.79 1390.36 1780.25 2025.29 2050.6 2284.5 TRUE FALSE 1943.61713 2088.098744 2221.341812 2695.512239 1613.840575 1469.080982 1661.492771 2007.583103 2263.767208 2567.521107 0.757001422 0.813274227 0.865169835 1.04985008 0.628559808 0.572178736 0.64711942 0.781914936 0.881693709 1 11.32616042 -4.721813721 20.38514102 0.789502305 0.756999035 9.63E-05 0.148439434 8126.541144 4178112.166 0.039583688 6.568242907 1.90E-05 4.721813721 -0.032503269 GTVPDDAVEALADS(ph)LGKK ddPTM_A459_MK2206_30min_R2 2 GTVPDDAVEALADSLGKK 18 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7EVY3;E7ES10;E9PDE4;H0Y9H6;A0A0A0MR45;H0Y7F0;E7EQA0;H0YD33;E7EQ12;P20810-5;E9PCH5;P20810-2;P20810-3 P20810-6;P20810-5 CAST Calpastatin 1 GTVPDDAVEALADS(1)LGKK;GTVPDDAVEALADS(1)LGKK 94.463 0.0077136 4013200 9939.4 13049.9 12751.7 9988.1 13405 9384 15062.1 11462.1 11994.4 11362.2 TRUE FALSE 10700.36811 12401.86094 13176.83531 9172.04028 12878.65235 9741.114696 13084.42818 12960.23583 13037.65123 10991.45234 0.973517218 1.128318675 1.198825678 0.834470277 1.171697055 0.886244546 1.190418497 1.179119503 1.18616274 1 13.42409441 GTVT(ph)PPPR ddPTM_A459_MK2206_30min_R1 1 GTVTPPPR 8 0 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 GT(0.007)VT(0.993)PPPR 110.34 0.028221 11318000 1932.2 1810.6 1593 1863.4 2143.4 1705.9 1902.7 1982.7 1300.9 1548.1 TRUE FALSE 1767.856244 1692.729611 1484.871598 2006.919391 2058.023839 1802.486584 1775.774355 1965.365463 1436.13321 1739.890316 1.016073386 0.972894438 0.853428279 1.15347466 1.182846885 1.035977135 1.020624311 1.129591587 0.825415946 1 10.76478064 -5.762069231 24.9999993 1.058867971 0.950008291 0.170975421 0.101730525 28.32375695 1124322.463 0.028438566 0.045187745 1.73E-06 5.762069231 -0.10885968 GTVTDFPGFDER ddPTM_A459_MK2206_30min_R2 2 GTVTDFPGFDER 12 0 P08758;E9PHT9;D6RBE9;D6RCN3 P08758 ANXA5 Annexin A5;Annexin 0 ; 195.83 0.0023169 14266800 54797 63687 59008 68414 59575 63056 63375 54498 53866 53375 FALSE TRUE 58992.30045 60524.39619 60975.29727 62824.35735 57235.78616 65455.64027 55053.78637 61621.07572 58551.16731 51633.37812 1.142522581 1.172195165 1.180927909 1.216739242 1.108503612 1.267700132 1.066244131 1.193434905 1.133979016 1 15.65601637 -9.891762897 0.497029933 0.973051667 1.175015064 0.479001172 0.052627896 6.149591243 1.448971406 0.344805482 0.024346379 1.28E-10 9.891762897 0.201963397 GTYFPAILNPPPS(ph)PATER ddPTM_A459_MK2206_30min_R2 2 GTYFPAILNPPPSPATER 18 0 H0YGW5;F5H7J9;O75581 H0YGW5 LRP6 Low-density lipoprotein receptor-related protein 6 1 GTYFPAILNPPPS(0.922)PAT(0.078)ER;GTY(0.002)FPAILNPPPS(0.906)PAT(0.092)ER 146.67 0.00023876 6310400 33184 25213.8 31102 35730.8 34107.9 38915 47514 23145.7 38126.1 35888 TRUE FALSE 35724.59255 23961.71936 32138.92516 32811.47934 32768.65247 40395.93759 41275.35473 26170.92246 41442.23926 34716.9775 1.029023698 0.690201771 0.925740876 0.945113363 0.943879762 1.163578759 1.188909799 0.753836432 1.193716799 1 15.08335373 -6.166196924 1.724067396 1.048263164 0.864019403 0.210346605 0.14501355 0.558777996 3.289981409 0.049834805 0.071724676 6.82E-07 6.166196924 -0.18424376 GTYVPSS(ph)PTR ddPTM_A459_MK2206_30min_R1 4 GTYVPSSPTR 10 0 Q9Y4P8-4;Q9Y4P8 Q9Y4P8-4 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 1 GTYVPS(0.003)S(0.989)PT(0.008)R;GTYVPS(0.003)S(0.901)PT(0.095)R;GTYVPS(0.002)S(0.997)PT(0.001)R;GTYVPS(0.002)S(0.998)PTR 177.57 8.38E-05 217619000 23724.2 23183.3 21808.3 17804.4 22633.7 19011.5 21581.7 19397.4 17495.9 15887.4 TRUE FALSE 21706.33221 21674.06296 20328.01336 19175.69797 21732.1518 20087.9147 20142.02417 19227.81058 19314.66141 17855.65106 1.215656161 1.213848932 1.138463856 1.073928803 1.217102179 1.125017208 1.128047592 1.076847353 1.081711406 1 14.12409312 -1.522878901 0.046032351 0.686329024 1.909984674 0.675303416 0.039135317 359.8442275 1.259710181 8.385585537 32.34038393 0.029999989 1.522878901 1.223655651 GTYVPSS(ph)PTR ddPTM_A459_MK2206_30min_R2 2 GTYVPSSPTR 10 0 Q9Y4P8-4;Q9Y4P8 Q9Y4P8-4 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 1 GTYVPS(0.019)S(0.979)PT(0.002)R;GTYVPS(0.045)S(0.955)PTR 160.86 0.00043512 182206000 878890 1208320 980160 1128610 981420 923680 958590 825070 839570 794810 TRUE FALSE 946178.4942 1148316.586 1012838.045 1036398.953 942884.5196 958831.2897 832725.9815 932909.4819 912594.281 768875.4148 1.230600532 1.493501501 1.317297999 1.347941335 1.226316385 1.247056768 1.0830441 1.213342843 1.186920876 1 19.55239032 -7.198073164 0.281513219 0.994906272 1.444339983 0.622539156 0.079558211 1.386999871 0.300813974 0.134027092 0.224519817 6.34E-08 7.198073164 0.449433711 GVAPADS(ph)PEAPR ddPTM_A459_MK2206_30min_R1 2 GVAPADSPEAPR 12 0 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 GVAPADS(1)PEAPR;GVAPADS(1)PEAPR 158.86 0.00045796 24614700 4597.8 4040.6 4798.2 3857.3 5122.6 4264.4 5240.6 4385.9 4147.5 4669.5 TRUE FALSE 4206.732966 3777.556206 4472.511553 4154.389914 4918.555995 4505.846643 4891.009136 4347.554539 4578.647467 5247.992913 0.801588919 0.7198097 0.852232773 0.791615001 0.937226112 0.858584742 0.931977085 0.828422334 0.872456869 1 12.35755006 -1.522878745 0.102084799 1.043947435 0.219177252 0.56090801 0.051198208 95.35056091 0.690360607 0.617950579 11.02196515 0.03 1.522878745 -0.824770183 GVAPADS(ph)PEAPR ddPTM_A459_MK2206_30min_R2 3 GVAPADSPEAPR 12 0 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 GVAPADS(1)PEAPR;GVAPADS(1)PEAPR;GVAPADS(1)PEAPR 147.96 0.00061561 58120000 127996 154729 134344 145508 142949 154880 160066 117144 137371 128975 TRUE FALSE 137795.4722 147045.3829 138822.9619 133619.5309 137336.104 160774.0669 139049.1419 132455.123 149319.2813 124766.5563 1.104426348 1.17856409 1.112661646 1.070956311 1.100744527 1.288599058 1.114474472 1.061623619 1.196789313 1 16.92887175 -10.9418373 3.658207974 0.998983801 1.135710055 0.286313419 0.064658701 48073065.95 559.7499972 411553.65 0.015878399 1.14E-11 10.9418373 0.136726254 GVAPADS(ph)PEAPRR ddPTM_A459_MK2206_30min_R1 1 GVAPADSPEAPRR 13 1 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 GVAPADS(1)PEAPRR 117.27 0.0065532 10028000 3816.9 4018.5 4224.5 3593.4 4782.7 3558.9 4957.3 4923.1 3818.5 3267.1 TRUE FALSE 3492.252612 3756.89492 3937.75271 3870.164291 4592.194931 3760.401842 4626.607562 4880.057856 4215.44674 3671.853013 0.951087257 1.023160488 1.07241567 1.054008501 1.25064781 1.02411557 1.260019817 1.329044991 1.148043433 1 11.84229259 -5.602113927 0.796567742 1.191061888 0.942069726 0.326430821 0.100018624 1.115924192 1.130058053 0.044620114 0.202514545 2.50E-06 5.602113927 -0.248992162 GVAPADS(ph)PEAPRR ddPTM_A459_MK2206_30min_R2 2 GVAPADSPEAPRR 13 1 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 GVAPADS(1)PEAPRR;GVAPADS(1)PEAPRR 98.421 0.0064529 55745000 66052 95576 87447 82027 85878 96071 79166 59173 83996 80788 TRUE FALSE 71108.99191 90829.83482 90362.43933 75325.13171 82505.99822 99727.04923 68771.4091 66907.11427 91301.82025 78151.89418 0.909881874 1.162221796 1.156241193 0.963829892 1.055713353 1.27606695 0.87997111 0.856116349 1.168261131 1 16.25399322 GVDDLDFFIGDEAIEKPTYATK ddPTM_A459_MK2206_30min_R1 2 GVDDLDFFIGDEAIEKPTYATK 22 1 F8WDR7;B4DXW1;P61158 F8WDR7 ACTR3 Actin-related protein 3 0 ; 149.12 8.45E-07 8590000 2348.91 2453.5 2149.5 1982.46 2569.11 1956.08 2263.22 2234.8 1768.36 1997 FALSE TRUE 2149.12287 2293.776704 2003.597929 2135.149413 2466.776909 2066.831559 2112.244723 2215.261379 1952.18735 2244.403437 0.957547487 1.021998392 0.892708457 0.951321575 1.0990791 0.920882371 0.941116329 0.987015678 0.869802335 1 11.13211631 -9.891338319 5.475150788 0.999999991 0.96289815 0.034043633 0.062141443 3784330.832 1025508.642 0.059369755 0.014842439 1.28E-10 9.891338319 -0.037101841 GVDEATIIDILT(ph)KR ddPTM_A459_MK2206_30min_R1 2 GVDEATIIDILTKR 14 1 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 GVDEATIIDILT(1)KR;GVDEATIIDILT(1)KR 92.096 0.020145 8413600 4475.3 4965.6 5471 4237.3 4485.4 4682.5 5298.9 4972 4617.6 3915.1 TRUE FALSE 4094.652234 4642.338537 5099.643763 4563.65758 4306.73702 4947.619103 4945.420049 4928.530328 5097.616044 4400.132145 0.930574832 1.055045254 1.158975139 1.037163755 0.978774473 1.124425117 1.123925347 1.120086889 1.158514307 1 12.10333114 -6.791800236 24.98387848 1.114054241 1.040710217 0.218341715 0.067377271 328.32458 270175.1689 0.024168833 0.021317596 1.62E-07 6.791800236 -0.073344024 GVDEATIIDILTK ddPTM_A459_MK2206_30min_R1 2 GVDEATIIDILTK 13 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 0 ; 282.61 1.35E-47 248330000 8324.1 9023.2 8032 7635.5 8077.9 7692.3 8743.1 7738.7 4783.3 7147.2 FALSE TRUE 7616.091583 8435.78804 7486.810218 8223.587533 7756.140138 8127.831378 8159.863752 7671.041362 5280.541152 8032.649095 0.948141951 1.050187546 0.932047464 1.023770295 0.965576866 1.011849426 1.015837198 0.954982755 0.657384767 1 12.97166014 -8.022795782 24.10626747 0.82118943 0.992731579 0.371625689 0.083891188 433.254211 458157.0736 0.049763915 0.019147304 9.49E-09 8.022795782 0.171542149 GVDEATIIDILTKR ddPTM_A459_MK2206_30min_R1 2 GVDEATIIDILTKR 14 1 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 0 ; 231.74 2.64E-13 15361800 4950.7 4560.9 8194.5 7879 7688.3 5511.9 5290.8 6711.6 3377.4 2810.2 FALSE TRUE 4529.616968 4263.984581 7638.280171 8485.841945 7382.058731 5823.979015 4937.860386 6652.921189 3728.492816 3158.348792 1.434172495 1.350067666 2.418440987 2.686796964 2.337315863 1.843994884 1.563430992 2.106455502 1.180519652 1 11.62495479 -8.339038227 4.387773977 1.019741075 1.981282595 0.416554463 0.416189426 0.243109605 8.283129072 0.442547824 0.117789195 4.58E-09 8.339038227 0.96154152 GVDEVTIVNILT(ph)NR ddPTM_A459_MK2206_30min_R2 1 GVDEVTIVNILTNR 14 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9 P07355 ANXA2 Annexin A2;Annexin 1 GVDEVTIVNILT(1)NR 141.82 0.00076589 0 4796 7427.2 6158.3 5691.9 5701.9 6752.4 5507.7 4732.9 6706.8 6768.7 TRUE FALSE 5163.185447 7058.376048 6363.614648 5226.853563 5478.014756 7009.367314 4784.532374 5351.50628 7290.145341 6547.837873 0.788532879 1.077970497 0.97186503 0.798256411 0.836614293 1.070485777 0.73070416 0.817293645 1.113366806 1 12.67680289 -10.64224725 5.324017511 1.000001857 0.909366421 0.038842148 0.131356639 2.85E-06 4.71E-07 0.125072776 0.030333982 2.28E-11 10.64224725 -0.090635436 GVDEVTIVNILTNR ddPTM_A459_MK2206_30min_R1 2 GVDEVTIVNILTNR 14 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9 P07355 ANXA2 Annexin A2;Annexin 0 ; 218.02 1.53E-07 51817000 4006.1 3868.9 3997.1 3872.9 4036.1 3665.9 3793.8 3485.8 2428.25 2794 FALSE TRUE 3665.360158 3617.033907 3725.787989 4171.191429 3875.33359 3873.46009 3540.722524 3455.324018 2680.675277 3140.141814 1.167259435 1.151869604 1.186503098 1.328344921 1.234126935 1.233530305 1.127567713 1.100371965 0.853679686 1 11.616614 -7.911035962 1.93744658 0.931562936 1.215015677 0.751326055 0.06296007 0.172208157 1.209657695 0.052001331 0.01860908 1.23E-08 7.911035962 0.283452741 GVDLLLEGVQGES(ph)SPTR ddPTM_A459_MK2206_30min_R1 1 GVDLLLEGVQGESSPTR 17 0 F5H7T0;F6RJM5;Q96S38-2;Q96S38 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 GVDLLLEGVQGES(0.664)S(0.33)PT(0.006)R 146.86 0.00041253 3643400 1430.8 1681.2 1667.1 1328.7 1337 1398.5 1814.4 1381 1584.7 1560.4 TRUE FALSE 1309.102947 1571.753574 1553.941897 1431.036704 1283.744459 1477.681861 1693.364687 1368.926063 1749.435236 1753.714132 0.746474538 0.896242749 0.886086203 0.816003405 0.732014663 0.842601331 0.965587638 0.780586777 0.997560095 1 10.77619788 -8.275027591 24.33811828 0.998780126 0.837844265 0.490508393 0.067368703 556.2626598 996319.3085 0.064625685 0.017083337 5.31E-09 8.275027591 -0.160935862 GVDLLLEGVQGES(ph)SPTRR ddPTM_A459_MK2206_30min_R1 2 GVDLLLEGVQGESSPTRR 18 1 F5H7T0;F6RJM5;Q96S38-2;Q96S38 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 GVDLLLEGVQGES(0.906)S(0.094)PT(0.001)RR;GVDLLLEGVQGES(0.498)S(0.498)PT(0.004)RR 118.36 0.00051284 11253300 3470.3 3273.2 3135.9 2771 3268.1 2895.7 2907.6 3258 2737.6 2555 TRUE FALSE 3175.132762 3060.114085 2923.043845 2984.4229 3137.924657 3059.652032 2713.639309 3229.515649 3022.183317 2871.532689 1.105727535 1.065672732 1.017938558 1.039313573 1.092769958 1.065511823 0.945014249 1.124666162 1.05246349 1 11.48760527 GVDLLLEGVQGES(ph)SPTRR ddPTM_A459_MK2206_30min_R2 3 GVDLLLEGVQGESSPTRR 18 1 F5H7T0;F6RJM5;Q96S38-2;Q96S38 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 GVDLLLEGVQGES(0.5)S(0.5)PTRR;GVDLLLEGVQGES(0.629)S(0.186)PT(0.186)RR;GVDLLLEGVQGES(0.541)S(0.171)PT(0.288)RR 116.45 0.00053431 7156500 19626.4 26905.5 22716.1 29833.1 26550.3 26047.6 28026.4 21055.8 22323.6 22975.3 TRUE FALSE 21129.01227 25569.41199 23473.44344 27395.6403 25507.80182 27038.85967 24346.50001 23807.86536 24265.26638 22225.61784 0.950660289 1.150447748 1.056143573 1.232615466 1.147675714 1.216562791 1.095425116 1.07119026 1.091770161 1 14.4399359 -8.5363708 1.083100137 1.003753457 1.12724479 0.171722601 0.076751217 0.949214892 2.440047017 0.073295789 0.023676436 2.91E-09 8.5363708 0.123491333 GVDLLLEGVQGESS(ph)PTR ddPTM_A459_MK2206_30min_R1 1 GVDLLLEGVQGESSPTR 17 0 F5H7T0;F6RJM5;Q96S38-2;Q96S38 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 GVDLLLEGVQGES(0.224)S(0.766)PT(0.011)R 111.7 0.0019995 3180600 895.47 1013.1 1170.8 1133.5 815.6 1047.4 1207.1 806.71 896.06 1401 TRUE FALSE 819.3055742 947.1470059 1091.329358 1220.802366 783.1129249 1106.702883 1126.576561 799.6570195 989.2086436 1574.566457 0.520337246 0.601528758 0.693098315 0.775326034 0.497351459 0.702861971 0.715483654 0.507858538 0.628241913 1 10.62073893 -10.62904049 3.962895002 1.000096258 0.629993306 0.601136544 0.091143182 40924590.57 78715769.45 56708.84328 0.022926087 2.35E-11 10.62904049 -0.370102952 GVDPNS(ph)R ddPTM_A459_MK2206_30min_R2 1 GVDPNSR 7 0 Q9UK76;J3KT51;Q9UK76-2;F2Z3M5 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 GVDPNS(1)R 85.807 0.035733 7487200 17204 16825 20037 17135 17812 14086 14632 24415 22703 12282 TRUE FALSE 18521.15147 15989.49497 20705.02358 15735.01569 17112.61138 14622.0526 12710.80082 27606.12433 24677.6659 11881.23935 1.558856861 1.34577669 1.742665304 1.32435811 1.440305248 1.230684121 1.069821123 2.323505446 2.077027925 1 13.53639771 -7.75449653 24.9999268 1.900200033 1.393122793 0.199885546 0.362018091 194.9385716 701945.1085 0.167968174 0.09426169 1.76E-08 7.75449653 -0.50707724 GVEEEEEDGEMRE ddPTM_A459_MK2206_30min_R1 5 GVEEEEEDGEMRE 13 1 P62306 P62306 SNRPF Small nuclear ribonucleoprotein F 0 ;;;; 281.41 1.75E-47 57545000 11768.3 11475.07 11511.93 10767.44 13106.91 11750.73 12897.23 11704.95 9964.41 8841.43 FALSE TRUE 10767.34429 10728.04086 10730.53227 11596.75009 12584.83402 12416.04618 12036.87932 11602.61486 11000.24608 9936.773098 1.083585605 1.079630253 1.079880979 1.16705393 1.266491033 1.24950485 1.211346903 1.167644138 1.107023977 1 13.27856171 -5.801053218 4.91388037 1.184412084 1.080242596 0.207347618 0.072160074 0.243089018 13.44746788 0.020357599 0.031958652 1.58E-06 5.801053218 -0.104169488 GVEEEEEDGEMRE ddPTM_A459_MK2206_30min_R2 4 GVEEEEEDGEMRE 13 1 P62306 P62306 SNRPF Small nuclear ribonucleoprotein F 0 ;;; 172.61 0.0023962 53176700 39392.1 45579.4 41849.7 47152.4 46768 46899 48010 32853.6 44020.5 39910.4 FALSE TRUE 42407.98946 43315.99327 43244.94811 43299.89809 44931.65333 48683.77431 41706.22933 37147.67832 47849.32352 38608.12692 1.098421313 1.121939776 1.120099615 1.12152289 1.163787444 1.260972189 1.080244826 0.962172508 1.239358843 1 15.23661694 -14.0679912 0.332227962 0.074506925 1.13238605 0.186184819 0.07931433 468.1775981 5.427024166 302.7283852 0.067796895 8.55E-15 14.0679912 1.057879125 GVEICIAT(ph)PGR ddPTM_A459_MK2206_30min_R1 1 GVEICIATPGR 11 0 P17844-2;P17844;J3KTA4;J3QSF1;J3KRZ1;A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 P17844-2;A0A1X7SBZ2 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 1 GVEICIAT(1)PGR 125.36 0.0078693 11682000 2402.1 2153.1 2059.1 2098.6 2120.5 2193.3 2289.7 1576.6 1971.6 1707.3 TRUE FALSE 2197.788781 2012.932799 1919.334029 2260.234536 2036.035995 2317.482751 2136.958291 1562.815952 2176.554875 1918.813213 1.145389643 1.049050937 1.000271426 1.177933589 1.061091294 1.20776881 1.1136875 0.81447008 1.134323477 1 10.90599856 GVEPS(ph)PSPIKPGDIK ddPTM_A459_MK2206_30min_R1 1 GVEPSPSPIKPGDIK 15 1 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.591)PS(0.409)PIKPGDIK 164.63 0.00044147 20411000 2764.9 3096 3295.2 2455.3 1884.8 1662.9 2447 1993 3201.1 3174.8 TRUE FALSE 2529.730736 2894.449837 3071.531005 2644.407631 1809.724425 1757.051961 2283.765095 1975.575411 3533.8658 3568.118193 0.708981766 0.811197859 0.860826587 0.741121086 0.507192959 0.492430986 0.64004749 0.553674319 0.990400432 1 11.80094769 -10.19963426 6.17464312 1.000000002 0.69188564 0.257721089 0.151752115 4.67E-09 9.41E-10 0.155914821 0.037814899 6.31E-11 10.19963426 -0.308114362 GVEPS(ph)PSPIKPGDIK ddPTM_A459_MK2206_30min_R2 1 GVEPSPSPIKPGDIK 15 1 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.832)PS(0.168)PIKPGDIK 102.5 0.0034392 31394000 168130 135360 146050 119980 108270 66131 152020 115470 94421 166220 TRUE FALSE 181002.1621 128638.2192 150919.2341 110177.2502 104018.7758 68647.66155 132059.5914 130562.3255 102633.5679 160796.255 1.125661553 0.800007558 0.93857431 0.685197862 0.646898 0.426923261 0.821285243 0.811973671 0.638283323 1 17.29487428 -4.006172379 0.879164277 0.709398189 2.238699783 0.355905831 0.153685867 8.166940432 1.833817541 0.052998082 16.64995765 9.86E-05 4.006172379 1.529301594 GVEPSPS(ph)PIKPGDIK ddPTM_A459_MK2206_30min_R1 1 GVEPSPSPIKPGDIK 15 1 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.146)PS(0.854)PIKPGDIK 67.252 0.033459 75637000 4175.4 5851.7 5574.1 4464.1 3099.1 3844.6 4034.1 4170.8 6338.1 7471.1 TRUE FALSE 3820.260304 5470.753266 5195.745622 4807.925755 2975.656285 4062.27793 3764.99255 4134.335135 6996.968176 8396.676272 0.454972918 0.651537953 0.618785988 0.572598681 0.35438502 0.483795945 0.448390819 0.492377579 0.833302124 1 13.03560265 -8.409657867 3.164581348 0.994860302 0.511424255 0.799312397 0.083427293 0.108815232 2.026827183 0.088242704 0.023641395 3.89E-09 8.409657867 -0.483436047 GVEPSPS(ph)PIKPGDIK ddPTM_A459_MK2206_30min_R2 2 GVEPSPSPIKPGDIK 15 1 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.05)PS(0.95)PIKPGDIK;GVEPS(0.115)PS(0.885)PIKPGDIK 92.096 0.0076201 137036000 242530 197518 205806 166070 176473 113798 237375 180318 117790 235350 TRUE FALSE 261098.2833 187709.5433 212667.4693 152501.5498 169543.7833 118128.6626 206207.3774 203886.1817 128035.1613 227670.5488 1.146825027 0.824478811 0.9341018 0.669834331 0.744689132 0.518857899 0.905727063 0.895531648 0.562370328 1 17.79658815 GVEPSPS(ph)PIKPGDIKR ddPTM_A459_MK2206_30min_R1 2 GVEPSPSPIKPGDIKR 16 2 Q92890;Q92890-1;Q92890-3 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.032)PS(0.968)PIKPGDIKR;GVEPS(0.22)PS(0.78)PIKPGDIKR 82.859 0.021919 96642000 10823.3 10828.9 10761.4 11060.5 8883.9 6637.6 8477.4 9296.7 7740.6 5676.6 TRUE FALSE 9902.7215 10123.93664 10030.94615 11912.38163 8530.035451 7013.415176 7911.888114 9215.419932 8545.26307 6379.860064 1.55218475 1.58685873 1.572283099 1.86718541 1.337025478 1.099305487 1.240135055 1.444454869 1.339412304 1 12.63930906 -6.443652285 6.993177593 1.249523012 1.63377031 0.664753589 0.14081318 0.173247351 13.12888769 0.044785474 0.050633852 3.60E-07 6.443652285 0.384247298 GVEPSPS(ph)PIKPGDIKR ddPTM_A459_MK2206_30min_R2 2 GVEPSPSPIKPGDIKR 16 2 Q92890;Q92890-1;Q92890-3 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.057)PS(0.943)PIKPGDIKR;GVEPS(0.01)PS(0.99)PIKPGDIKR 72.681 0.014357 101010300 122134 165804 174642 151979 192347 128851 195902 142011 137737 140915 TRUE FALSE 131484.6729 157570.4145 180464.4771 139561.8295 184794.4903 133754.5151 170179.8321 160572.3253 149717.1153 136316.9551 0.964551129 1.155912075 1.323859361 1.023803895 1.355623665 0.981202338 1.248412804 1.177933627 1.098301493 1 17.05660549 -10.09243209 7.086232003 0.999999752 1.154574968 0.104414584 0.128400017 0 0 0.11592095 0.02811496 8.08E-11 10.09243209 0.154575217 GVESSDVHPAPTVQQMS(ph)SPKPAEER ddPTM_A459_MK2206_30min_R2 1 GVESSDVHPAPTVQQMSSPKPAEER 25 1 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 GVESSDVHPAPT(0.18)VQQMS(0.41)S(0.41)PKPAEER 51.568 0.017118 5286300 11017 15324 14429 12292 12099 13411 13517 10271 12350 16161 TRUE FALSE 11860.46999 14563.03244 14910.05566 11287.70428 11623.93247 13921.365 11742.20166 11613.45497 13424.18068 15633.66789 0.758649222 0.931517322 0.953714494 0.722012541 0.743519214 0.890473374 0.751084246 0.742849026 0.85867122 1 13.93236868 -4.435231892 11.60275264 0.831634026 9.62E-05 0.053695543 0.095693612 217086.6454 895932.1735 0.02413766 4262436.392 3.67E-05 4.435231892 -0.831537874 GVESSDVHPAPTVQQMSS(ph)PKPAEER ddPTM_A459_MK2206_30min_R1 2 GVESSDVHPAPTVQQMSSPKPAEER 25 1 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 GVESSDVHPAPTVQQMS(0.243)S(0.757)PKPAEER;GVESSDVHPAPT(0.015)VQQMS(0.391)S(0.594)PKPAEER 100.79 1.86E-06 19015300 3623 2918.66 3731.5 2926.82 3147.66 3002.13 3505.7 3543.7 3188.6 3151.4 TRUE FALSE 3314.844825 2728.654704 3478.216177 3152.244184 3022.282037 3172.108006 3271.84115 3512.717805 3520.066381 3541.819224 0.935915871 0.770410496 0.982042266 0.890007079 0.853313466 0.895615447 0.92377418 0.991783483 0.993858285 1 11.79027486 -7.621911576 2.195711603 0.998743186 0.885161924 0.466212949 0.051303083 0.277330735 2.668859345 0.030743724 0.014773577 2.39E-08 7.621911576 -0.113581262 GVESSDVHPAPTVQQMSS(ph)PKPAEER ddPTM_A459_MK2206_30min_R2 2 GVESSDVHPAPTVQQMSSPKPAEER 25 1 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 GVESSDVHPAPT(0.001)VQQMS(0.381)S(0.618)PKPAEER;GVESSDVHPAPT(0.001)VQQMS(0.395)S(0.604)PKPAEER 104.5 4.48E-06 9519900 34740 44707 38667 42373 40035 38206 51910 31124 35523 49846 TRUE FALSE 37399.72111 42486.91539 39956.13848 38910.99036 38463.02474 39659.9561 45094.15464 35192.01366 38612.72633 48219.5291 0.77561357 0.881114274 0.828629794 0.806955005 0.797664877 0.82248742 0.935184467 0.729829061 0.800769461 1 15.55732994 -7.043664608 24.95340712 0.84891783 0.82033905 0.0734869 0.072954876 1999.727384 1142795.448 0.027401101 0.021226454 9.04E-08 7.043664608 -0.028578781 GVFPEAATKPLLS(ph)MGWCGK ddPTM_A459_MK2206_30min_R1 1 GVFPEAATKPLLSMGWCGK 19 1 J3QL04 J3QL04 ASPSCR1 1 GVFPEAATKPLLS(1)MGWCGK 58.83 0.024759 21464000 1714.7 2827.4 2482.5 1917.3 971.07 874.37 1590.7 1449.4 2728.6 3455.6 TRUE FALSE 1568.855761 2643.335746 2313.994817 2064.970778 932.3902256 923.8760738 1484.587305 1436.728049 3012.247734 3883.705816 0.403958445 0.680622032 0.595821343 0.531701132 0.240077459 0.237885184 0.382260494 0.369937404 0.775611716 1 11.92321821 -8.454453409 3.374993104 0.996216274 0.433754736 0.661664756 0.135203564 0.149123281 3.426331683 0.14962457 0.039696771 3.51E-09 8.454453409 -0.562461538 GVGDDQLGEES(ph)EERDDHLLPM ddPTM_A459_MK2206_30min_R1 2 GVGDDQLGEESEERDDHLLPM 21 1 H0YF90;F5GX30;P20645 H0YF90 M6PR Cation-dependent mannose-6-phosphate receptor 1 GVGDDQLGEES(1)EERDDHLLPM;GVGDDQLGEES(1)EERDDHLLPM 85.387 0.00060836 10384800 2792.91 2705.57 2267.42 2316.06 3429.9 3274.8 3423.02 3104.53 2989.46 2748.27 TRUE FALSE 2555.358338 2529.436901 2113.513848 2494.443343 3293.27982 3460.216346 3194.676581 3077.387422 3300.225065 3088.746436 0.827312436 0.818920217 0.684262659 0.807590844 1.066218898 1.120265589 1.034295514 0.996322452 1.068467462 1 11.59280573 -6.228789604 5.528598147 1.050751045 0.777378943 0.871154151 0.049586102 0.065752902 5.889394503 0.015591474 0.019788168 5.90E-07 6.228789604 -0.273372102 GVGQADWT(ph)PDLGLR ddPTM_A459_MK2206_30min_R1 1 GVGQADWTPDLGLR 14 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GVGQADWT(1)PDLGLR 115.26 0.0066024 5561400 2079.1 1774.5 1924.3 1665 2373.9 2099.7 2538.2 2165.7 2123.4 2136.8 TRUE FALSE 1902.261627 1658.979727 1793.683877 1793.238588 2279.342536 2218.583199 2368.881309 2146.765513 2344.135029 2401.522916 0.792106382 0.690803205 0.746894342 0.746708922 0.949123792 0.923823456 0.986407955 0.893918396 0.976103544 1 11.22973386 -6.256822695 6.235656002 0.950055502 0.739728263 0.887152029 0.036794454 0.044688057 8.581724623 0.010536548 0.012894615 5.54E-07 6.256822695 -0.210327239 GVGS(ph)PEPGPTAPYLGR ddPTM_A459_MK2206_30min_R1 2 GVGSPEPGPTAPYLGR 16 0 Q9C0B5-2;Q9C0B5 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5 1 GVGS(0.999)PEPGPT(0.001)APYLGR;GVGS(0.999)PEPGPT(0.001)APYLGR 130.66 0.00076813 17823700 4334.1 4118.5 3068.9 3169.7 4870.2 4586.5 5636.4 5293.5 5272.9 5941.4 TRUE FALSE 3965.462036 3850.384901 2860.591618 3413.830843 4676.209621 4846.183666 5260.40604 5247.219488 5821.036824 6677.465487 0.593857361 0.576623707 0.428394819 0.511246498 0.700297086 0.72575196 0.787784834 0.78581005 0.871743453 1 12.7050849 -7.326715552 0.532123561 0.973727162 0.503201678 0.863673876 0.06079082 0.342867367 0.206204515 0.064878567 0.05245409 4.71E-08 7.326715552 -0.470525484 GVGS(ph)PEPGPTAPYLGR ddPTM_A459_MK2206_30min_R2 2 GVGSPEPGPTAPYLGR 16 0 Q9C0B5-2;Q9C0B5 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5 1 GVGS(1)PEPGPTAPYLGR;GVGS(1)PEPGPTAPYLGR 189.33 9.57E-07 22656000 88098 51724 68064 65466 46498 89658 101753 49241 98257 72137 TRUE FALSE 94842.85062 49155.46137 70333.21979 60117.21838 44672.25489 93069.99802 88392.70887 55676.96777 106803.2163 69783.1756 1.35910769 0.704402758 1.007882189 0.861485851 0.640157954 1.333702532 1.266676504 0.797856608 1.530500946 1 16.09059163 -6.776198528 24.99979447 1.178171403 0.905159949 0.216724807 0.257216098 374.6308979 634564.892 0.08678269 0.076849132 1.67E-07 6.776198528 -0.273011454 GVGS(ph)PPGR ddPTM_A459_MK2206_30min_R2 1 GVGSPPGR 8 0 O96028-3;O96028;O96028-6;H0Y9L4;O96028-5 O96028-3;O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GVGS(1)PPGR 89.029 0.030241 8846600 25374 24608 23041 31194 25411 28170 22725 23892 21778 22387 TRUE FALSE 27316.65295 23386.0025 23809.17544 28645.35042 24413.23646 29242.02909 19741.1802 27014.76643 23672.21107 21656.51402 1.26135965 1.079859966 1.099400181 1.322712898 1.127292991 1.350264824 0.911558535 1.247419894 1.093075785 1 14.40251342 -8.861490358 0.549423474 0.995490364 1.184713388 0.170856067 0.122982251 2.732150347 1.654055095 0.152721695 0.056848298 1.38E-09 8.861490358 0.189223025 GVGSGPHPPDTQQPS(ph)PSK ddPTM_A459_MK2206_30min_R1 4 GVGSGPHPPDTQQPSPSK 18 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 GVGSGPHPPDT(0.016)QQPS(0.869)PS(0.115)K;GVGSGPHPPDT(0.001)QQPS(0.972)PS(0.027)K;GVGSGPHPPDT(0.444)QQPS(0.535)PS(0.021)K;GVGSGPHPPDT(0.131)QQPS(0.774)PS(0.095)K 135.23 0.00023908 375165000 17070.7 14630.9 16157.6 13053.4 15848.5 14698.2 17088.2 14390.7 13197.2 13312.4 TRUE FALSE 15618.74732 13678.42575 15060.86713 14058.77513 15217.22069 15530.39938 15948.27736 14264.88363 14569.09617 14961.64062 1.043919429 0.914233011 1.006632061 0.939654647 1.017082356 1.038014465 1.065944422 0.953430442 0.973763275 1 13.86898076 -6.295969497 24.57222603 1.010104716 0.973870163 0.110705211 0.043918137 1051.255524 748089.0294 0.013719527 0.015557143 5.06E-07 6.295969497 -0.036234554 GVGSGPHPPDTQQPS(ph)PSK ddPTM_A459_MK2206_30min_R2 4 GVGSGPHPPDTQQPSPSK 18 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 GVGSGPHPPDT(0.178)QQPS(0.681)PS(0.141)K;GVGSGPHPPDT(0.044)QQPS(0.952)PS(0.004)K;GVGSGPHPPDT(0.372)QQPS(0.488)PS(0.14)K;GVGSGPHPPDT(0.084)QQPS(0.855)PS(0.061)K 119.87 0.00063882 860832000 365233 364387 343432 348658 373321 334061 470682 310961 344715 428323 TRUE FALSE 393195.5193 346292.0714 354881.8515 320171.5261 358662.5418 346773.9254 408880.888 351604.6704 374697.6876 414346.8556 0.948952584 0.835754071 0.856484963 0.772713783 0.865609421 0.836916995 0.986808232 0.848575694 0.904309234 1 18.66047945 -7.230188826 24.92809468 0.922304617 0.849084433 0.323383012 0.056935747 853.5932662 680899.2861 0.021413344 0.016585173 5.89E-08 7.230188826 -0.073220184 GVHIHQAGGS(ph)PPASSTSSSSLTNDVAK ddPTM_A459_MK2206_30min_R1 4 GVHIHQAGGSPPASSTSSSSLTNDVAK 27 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 1 GVHIHQAGGS(0.986)PPASST(0.01)S(0.003)S(0.001)SSLTNDVAK;GVHIHQAGGS(0.885)PPAS(0.001)S(0.001)T(0.097)S(0.013)S(0.003)S(0.001)SLTNDVAK;GVHIHQAGGS(0.431)PPAS(0.033)S(0.033)T(0.431)S(0.047)S(0.006)S(0.002)S(0.008)LT(0.011)NDVAK;GVHIHQAGGS(0.999)PPASSTSSSSLTNDVAK 160.1 2.76E-17 40389600 11387.8 10397.9 11175.42 8989.3 10849 10522.8 10745.4 10349.1 10312.56 9602.29 TRUE FALSE 10419.20781 9720.99482 10416.86363 9681.657444 10416.86136 11118.59184 10028.59397 10258.61891 11384.58752 10791.89418 0.965466084 0.900768175 0.965248867 0.897123089 0.965248656 1.030272504 0.92927097 0.950585573 1.054920232 1 13.39766049 -6.515676005 24.64225887 0.987251421 0.93213796 0.339145106 0.039643065 349.2677211 1194932.731 0.012583092 0.013085567 3.05E-07 6.515676005 -0.055113461 GVHIHQAGGS(ph)PPASSTSSSSLTNDVAK ddPTM_A459_MK2206_30min_R2 3 GVHIHQAGGSPPASSTSSSSLTNDVAK 27 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 1 GVHIHQAGGS(0.937)PPAS(0.002)S(0.002)T(0.054)S(0.003)S(0.001)SSLTNDVAK;GVHIHQAGGS(0.949)PPAS(0.006)S(0.006)T(0.029)S(0.009)SSSLTNDVAK;GVHIHQAGGS(0.994)PPASST(0.004)S(0.001)SSSLTNDVAK 130.81 3.96E-12 92938000 114409 148465 139718 162603 163911 144712 189264 123311 148234 173293 TRUE FALSE 123168.241 141092.444 144376.1284 149317.8148 157475.0306 150219.1166 164413.4095 139428.1711 161127.1254 167638.4636 0.734725423 0.841647203 0.861235097 0.890713334 0.939372905 0.896089795 0.980761849 0.831719452 0.961158447 1 17.35499368 -3.42852813 0.547960443 0.932904352 7.83E-11 0.658705055 0.044648171 9.74997544 0.70274027 0.021687272 8.050806053 0.000372797 3.42852813 -0.932904352 GVHIHQAGGSPPASST(ph)SSSSLTNDVAK ddPTM_A459_MK2206_30min_R2 1 GVHIHQAGGSPPASSTSSSSLTNDVAK 27 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 1 GVHIHQAGGS(0.432)PPAS(0.004)S(0.004)T(0.514)S(0.03)S(0.01)S(0.003)S(0.003)LT(0.001)NDVAK 129.26 8.66E-12 14829000 40557 47177 45447 40072 49004 34583 53647 33699 34577 58272 TRUE FALSE 43662.0751 44834.25878 46962.1803 36797.98942 47079.85673 35899.0803 46603.08446 38103.57501 37584.44496 56370.58941 0.77455417 0.795348412 0.833097202 0.652787026 0.835184752 0.636840606 0.826726932 0.675947784 0.666738548 1 15.78265503 -10.56007061 4.449269139 1.000012734 0.745517912 0.50782467 0.075556156 34234679.25 1.088782232 4643.370228 0.017574637 2.75E-11 10.56007061 -0.254494822 GVIS(ph)TPVIR ddPTM_A459_MK2206_30min_R1 2 GVISTPVIR 9 0 Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A0C4DG79;A0A494C0Y9 Q9NZB2-4 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 GVIS(0.5)T(0.5)PVIR;GVIS(0.5)T(0.5)PVIR 121.73 0.0061683 5703500 7271.6 7585.3 5951.4 6042.6 7620.1 7023 7650.9 6061.4 5767.2 5113.5 TRUE FALSE 6653.112235 7091.495591 5547.43555 6508.002099 7316.575281 7420.636191 7140.522421 6008.405819 6366.721078 5746.998985 1.157667202 1.233947598 0.965275192 1.132417478 1.273112332 1.291219332 1.242478455 1.045485798 1.107834036 1 12.48859308 -11.25938745 6.980412546 0.997644165 1.16271319 0.194097546 0.098395973 0.00396168 0.000149542 0.10462543 0.025049005 5.50E-12 11.25938745 0.165069024 GVIST(ph)PVIR ddPTM_A459_MK2206_30min_R2 2 GVISTPVIR 9 0 Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A0C4DG79;A0A494C0Y9 Q9NZB2-4 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 GVIS(0.069)T(0.931)PVIR;GVIS(0.076)T(0.924)PVIR 137.05 0.0060506 9393800 90045 92939 100405 111772 90607 110284 85605 67359 74169 83793 TRUE FALSE 96938.91443 88323.78441 103752.4526 102639.8701 87049.31392 114480.9349 74364.96067 76163.05258 80620.08555 81058.84127 1.195907971 1.089625549 1.279964665 1.266239049 1.073902767 1.412318917 0.917419488 0.939602039 0.994587195 1 16.30668193 -7.287190335 24.96314969 0.957868982 1.211982233 0.644321401 0.093321383 476.9512897 462357.6335 0.037792403 0.02548948 5.16E-08 7.287190335 0.254113251 GVLDLDRPGEPAGEES(ph)PGPLQER ddPTM_A459_MK2206_30min_R1 3 GVLDLDRPGEPAGEESPGPLQER 23 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GVLDLDRPGEPAGEES(1)PGPLQER;GVLDLDRPGEPAGEES(1)PGPLQER;GVLDLDRPGEPAGEES(1)PGPLQER 92.225 7.18E-05 19709900 4373.92 3814.84 3991.97 3259.7 3610.79 3678.81 4308.95 3664.25 4006.75 3427.96 TRUE FALSE 4001.895136 3566.493223 3721.006199 3510.762659 3466.964588 3887.101043 4021.507808 3632.213849 4423.266001 3852.641565 1.038740581 0.925726716 0.965832439 0.91126117 0.899892848 1.008944377 1.043831288 0.942785304 1.148112516 1 11.91163225 -6.924756286 6.853953248 1.028583865 0.946185987 0.31800484 0.059536125 0.267816499 19.91386923 0.020340701 0.01791194 1.19E-07 6.924756286 -0.082397879 GVLDLDRPGEPAGEES(ph)PGPLQER ddPTM_A459_MK2206_30min_R2 2 GVLDLDRPGEPAGEESPGPLQER 23 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GVLDLDRPGEPAGEES(1)PGPLQER;GVLDLDRPGEPAGEES(1)PGPLQER 78.343 0.00039075 14969700 27831 29679 26354 25590 24697.9 35837 33917 24824.8 20953.2 28785.8 TRUE FALSE 29961.76276 28205.18402 27232.62921 23499.21514 23728.13635 37200.80215 29463.65716 28069.4866 22775.67146 27846.5217 1.075960692 1.012879968 0.977954428 0.843883318 0.852104137 1.335922761 1.058073158 1.008006921 0.817900049 1 14.76520951 -8.095882013 9.657356429 0.909365802 1.019960525 0.099378069 0.134906065 1.119563118 105.8387357 0.096956101 0.036566648 8.02E-09 8.095882013 0.110594723 GVMAVTAVTATAAS(ph)DR ddPTM_A459_MK2206_30min_R2 1 GVMAVTAVTATAASDR 16 0 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;A0A087WT54 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 GVMAVTAVTATAAS(1)DR 183.75 1.11E-13 0 13985 9144.3 14119 12696 12370 12082 12600 9552.5 7074.3 12880 TRUE FALSE 15055.70235 8690.207359 14589.72041 11658.69619 11884.29165 12541.78898 10945.60486 10801.04455 7689.609827 12459.72665 1.20834933 0.697463725 1.17095028 0.93571043 0.953816402 1.006586206 0.878478731 0.866876525 0.617157185 1 13.6049848 -7.554009872 2.176443439 0.801757478 0.98551401 0.187550082 0.157508169 0.503931867 4.748864871 0.086562555 0.044094266 2.79E-08 7.554009872 0.183756532 GVNCIDYYSGGDKPYLISGADDR ddPTM_A459_MK2206_30min_R2 1 GVNCIDYYSGGDKPYLISGADDR 23 1 P35606;P35606-2 P35606 COPB2 Coatomer subunit beta 0 80.016 0.0052264 0 10017 11058 13692 14353 14105 9101.4 12261 10911 7131.7 12282 FALSE TRUE 10783.90922 10508.8758 14148.48445 13180.31399 13551.16683 9447.760155 10651.11597 12337.10516 7752.002375 11881.23935 0.907641779 0.884493233 1.19082564 1.109338311 1.140551624 0.795183051 0.896465062 1.038368541 0.652457387 1 13.53639771 -6.762782376 24.99965015 0.880140984 1.049067163 0.288719889 0.133382741 50.95636234 948528.0868 0.046870625 0.043600817 1.73E-07 6.762782376 0.168926178 GVNLPGAAVDLPAVSEK ddPTM_A459_MK2206_30min_R2 2 GVNLPGAAVDLPAVSEK 17 0 P14618;P14618-3;B4DNK4;H3BQ34;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 147.51 0.0043564 3364800 46918 42377 43735 41941 41976 36430 51376 40298 35674 47045 FALSE TRUE 50510.07815 40272.6198 45193.10307 38514.28614 40327.81133 37816.36918 44630.26949 45565.08696 38776.86004 45509.9255 1.109869498 0.884919484 0.993038388 0.846283217 0.88613222 0.830947728 0.980671117 1.001212075 0.852052813 1 15.4738936 -2.93537559 11.21882941 0.932737823 0.982658629 0 0.086790945 0 0 0.019292938 0 0.001160445 2.93537559 0.049920806 GVPAGNS(ph)DTEGGQPGR ddPTM_A459_MK2206_30min_R1 4 GVPAGNSDTEGGQPGR 16 0 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5;G3V3T3 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 GVPAGNS(0.613)DT(0.387)EGGQPGR;GVPAGNS(0.575)DT(0.425)EGGQPGR;GVPAGNS(0.92)DT(0.08)EGGQPGR;GVPAGNS(0.561)DT(0.439)EGGQPGR 230.48 2.76E-15 151368000 2772.91 2159.98 3198.86 2228.96 2820.79 2427.99 2737.16 2632.84 3002.2 2208.02 TRUE FALSE 2537.059443 2019.364909 2981.730296 2400.634885 2708.431961 2565.460696 2554.569051 2609.821357 3314.289433 2481.566187 1.022362191 0.813746141 1.201551791 0.967387007 1.0914204 1.033807081 1.02941806 1.051683155 1.335563585 1 11.27703522 -4.918994821 0.428360805 1.110098118 0.837245378 0.137867199 0.121986399 9.221572892 1.447367456 0.093053391 1.275581313 1.21E-05 4.918994821 -0.27285274 GVPAGNS(ph)DTEGGQPGR ddPTM_A459_MK2206_30min_R2 4 GVPAGNSDTEGGQPGR 16 0 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5;G3V3T3 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 GVPAGNS(0.917)DT(0.083)EGGQPGR;GVPAGNS(0.595)DT(0.405)EGGQPGR;GVPAGNS(0.998)DT(0.002)EGGQPGR;GVPAGNS(0.918)DT(0.082)EGGQPGR 212.59 2.80E-08 165163000 46494 73098.3 51440.7 95536 70585 81483 62498.4 59044 64888 51980.5 TRUE FALSE 50053.61639 69468.34472 53155.70726 87730.4032 67813.47824 84583.89266 54292.28501 66761.25353 70531.84095 50284.38054 0.995410818 1.381509406 1.057101762 1.744684975 1.348599257 1.682110662 1.07970476 1.327673779 1.40265904 1 15.61782272 -10.99039678 3.041826005 0.991767096 1.343522 0.153930392 0.235288903 156655243.5 184933463.2 10916592.18 0.059026515 1.02E-11 10.99039678 0.351754904 GVPAGNS(ph)DTEGGQPGRK ddPTM_A459_MK2206_30min_R1 2 GVPAGNSDTEGGQPGRK 17 1 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5;G3V3T3 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 GVPAGNS(0.928)DT(0.072)EGGQPGRK;GVPAGNS(1)DTEGGQPGRK 293.77 8.06E-76 22706400 2760.74 2939.6 2723.66 2994.82 3336.05 2122.72 2873.8 2967.95 1946.53 2219.98 TRUE FALSE 2525.924566 2748.231506 2538.785548 3225.481555 3203.168064 2242.906572 2682.094046 2942.001526 2148.878759 2495.007882 1.012391417 1.101492114 1.017546103 1.292774094 1.28383084 0.89895771 1.074984197 1.179155203 0.861271331 1 11.28482866 -6.768147726 24.9997426 1.018577826 1.140884223 0.244140744 0.120476133 284.5819517 1060534.06 0.043935174 0.039628254 1.71E-07 6.768147726 0.122306397 GVPAGNS(ph)DTEGGQPGRK ddPTM_A459_MK2206_30min_R2 1 GVPAGNSDTEGGQPGRK 17 1 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5;G3V3T3 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 GVPAGNS(1)DTEGGQPGRK 119.92 0.0026696 3390800 4290.6 4989.5 5475.5 5002.2 5605.4 5146.6 5799.7 4405 5799.4 6083.1 TRUE FALSE 4619.091635 4741.728685 5658.050437 4593.504259 5385.303831 5342.457469 5038.192423 4980.748625 6303.821329 5884.608945 0.784944535 0.805784841 0.961499819 0.780596349 0.915150672 0.907869583 0.856164355 0.846402653 1.071238784 1 12.52273083 -1.522878748 0.075616257 1.142089714 0.253372934 0.414944408 0.07013132 229.4563739 1.277141595 2.416647514 21.45454443 0.03 1.522878748 -0.88871678 GVPGCCYS(ph)SLPR ddPTM_A459_MK2206_30min_R2 1 GVPGCCYSSLPR 12 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 GVPGCCYS(0.599)S(0.401)LPR 103.46 0.010673 6993700 29698 31339 27217 30812 25136 26349 35344 23213 27164 36261 TRUE FALSE 31971.70171 29782.75083 28124.4012 28294.56104 24149.03434 27351.72966 30703.29034 26247.0188 29526.67562 35077.80654 0.911450996 0.849048266 0.801771946 0.806622872 0.688441973 0.779744584 0.875291056 0.748251427 0.84174806 1 15.09827092 -9.834401631 16.82333235 1 0.807537814 0.464339627 0.060652412 0 0 0.06092959 0.014777596 1.46E-10 9.834401631 -0.192462186 GVPGCCYSS(ph)LPR ddPTM_A459_MK2206_30min_R1 1 GVPGCCYSSLPR 12 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 GVPGCCYS(0.15)S(0.85)LPR 98.156 0.015542 9429400 674.65 815.34 971.49 713.75 730.01 797.43 802.12 692.1 970.85 1142 TRUE FALSE 617.2674748 762.2612178 905.5479655 768.7231487 700.9321559 842.5797975 748.6120384 686.0490427 1071.773332 1283.479582 0.480932836 0.593902099 0.705541388 0.598936796 0.546118665 0.656480874 0.583267587 0.534522756 0.835052888 1 10.32584463 -8.464057777 3.499713281 0.997765969 0.593376227 0.83699454 0.060246284 0.079687425 2.024584913 0.059256383 0.015672584 3.44E-09 8.464057777 -0.404389742 GVQKPAGPST(ph)SPDGNSR ddPTM_A459_MK2206_30min_R2 2 GVQKPAGPSTSPDGNSR 17 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 GVQKPAGPS(0.236)T(0.711)S(0.052)PDGNS(0.001)R;GVQKPAGPS(0.104)T(0.566)S(0.33)PDGNSR 102.79 0.0047631 102259000 24783.3 31439 26365 27523 32239 31453 36575 26387 32178 32570 TRUE FALSE 26680.7285 29877.78498 27243.99594 25274.28286 30973.13487 32649.96596 31772.65857 29835.8715 34976.78428 31507.24357 0.846812526 0.948283048 0.864689921 0.802173723 0.983048067 1.036268561 1.008423936 0.946952768 1.110118827 1 14.94339592 -6.425522568 5.686282695 1.015688834 0.871977998 0.675777068 0.050820026 0.144605815 6.84426366 0.015865989 0.017933126 3.75E-07 6.425522568 -0.143710836 GVQKPAGPSTS(ph)PDGNSR ddPTM_A459_MK2206_30min_R1 3 GVQKPAGPSTSPDGNSR 17 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 GVQKPAGPST(0.003)S(0.996)PDGNSR;GVQKPAGPST(0.001)S(0.998)PDGNSR;GVQKPAGPS(0.001)T(0.012)S(0.987)PDGNSR 226.06 1.74E-15 22627500 7323.3 6894 7308 6668.6 7763.7 6850.6 7137.6 7529.6 6391 5630.5 TRUE FALSE 6700.414879 6445.199347 6811.953321 7182.216727 7454.455389 7238.475052 6661.463727 7463.769501 7055.36732 6328.048848 1.058843735 1.018512894 1.076469775 1.13498124 1.178002188 1.143871551 1.052688417 1.179474065 1.11493566 1 12.62754502 -5.557970121 3.985067372 1.123291953 1.039547452 0.241802516 0.052764388 0.248998513 8.601147632 0.013982796 0.026816896 2.77E-06 5.557970121 -0.083744501 GVQKPAGPSTS(ph)PDGNSR ddPTM_A459_MK2206_30min_R2 1 GVQKPAGPSTSPDGNSR 17 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 GVQKPAGPS(0.009)T(0.015)S(0.975)PDGNS(0.001)R 137.32 0.0024293 5584500 20333 24549 21519 27986 23784 25206 24179 19731 19040 25004 TRUE FALSE 21889.71011 23329.93236 22236.43272 25699.45428 22850.12065 26165.23199 21004.26826 22309.90945 20696.06478 24188.12153 0.90497768 0.964520222 0.919312097 1.062482436 0.944683556 1.081738901 0.868371206 0.922349816 0.855629271 1 14.56201111 -10.23710102 5.141764431 1.000000009 0.951048641 0.045734778 0.070436646 97024211.32 45.76628678 13.7699792 0.017126507 5.79E-11 10.23710102 -0.048951368 GVQVETIS(ph)PGDGR ddPTM_A459_MK2206_30min_R1 1 GVQVETISPGDGR 13 0 P62942;Q1JUQ3;A0A087WTS4;A0A087WV48;A0A087WZM5 P62942 FKBP1A;FKBP12-Exin Peptidyl-prolyl cis-trans isomerase FKBP1A;Peptidyl-prolyl cis-trans isomerase 1 GVQVET(0.048)IS(0.952)PGDGR 89.136 0.022864 6576900 1604.2 1729.6 1674.9 1267.5 2952.1 2267.3 2527.6 1782.9 1196.9 1070.5 TRUE FALSE 1467.754366 1617.002726 1561.212455 1365.12307 2834.511606 2395.672567 2358.988416 1767.312293 1321.322038 1203.121622 1.219955106 1.344006039 1.297634775 1.134650932 2.355964313 1.991213958 1.96072315 1.468939018 1.098244778 1 10.23256677 GVQVETIS(ph)PGDGR ddPTM_A459_MK2206_30min_R2 3 GVQVETISPGDGR 13 0 P62942;Q1JUQ3;A0A087WTS4;A0A087WV48;A0A087WZM5 P62942 FKBP1A;FKBP12-Exin Peptidyl-prolyl cis-trans isomerase FKBP1A;Peptidyl-prolyl cis-trans isomerase 1 GVQVET(0.002)IS(0.998)PGDGR;GVQVET(0.035)IS(0.965)PGDGR;GVQVET(0.047)IS(0.953)PGDGR 144.41 0.00067105 12884600 95921 108180 106119 100739 105909 96754 127706 86260 91075 103304 TRUE FALSE 103264.7855 102807.9385 109656.9545 92508.30145 101750.4805 100436.0413 110938.0488 97534.47817 98996.53887 99933.19894 1.033338136 1.028766612 1.097302555 0.925701393 1.018184963 1.005031785 1.110122061 0.975996758 0.990627138 1 16.60867642 -1.522878745 0.20037617 1.002596677 1.181627055 0.042252747 0.050520075 228.0206963 2.758209724 0.095589055 12.82308791 0.03 1.522878745 0.179030378 GVQVPAS(ph)PDTVPQPSLR ddPTM_A459_MK2206_30min_R1 1 GVQVPASPDTVPQPSLR 17 0 Q92613;F2Z2B6;F2Z3N8 Q92613 JADE3 Protein Jade-3 1 GVQVPAS(0.766)PDT(0.234)VPQPSLR 152.68 0.00015978 7414200 2537.7 2438.8 2495.2 2233 2831.4 2632.7 2691.3 2495 2318.4 2270.2 TRUE FALSE 2321.855289 2280.033677 2325.832776 2404.986047 2718.619342 2781.761199 2511.768288 2473.186478 2559.405976 2551.449515 0.9100142 0.893622885 0.911573113 0.942595976 1.065519551 1.090266996 0.984447575 0.969326049 1.003118408 1 11.31710138 -6.057615817 4.492181042 1.018864969 0.906371393 0.696191493 0.03437479 0.137677885 5.702884178 0.011723302 0.015858068 8.76E-07 6.057615817 -0.112493576 GVQVPASPDT(ph)VPQPSLR ddPTM_A459_MK2206_30min_R2 1 GVQVPASPDTVPQPSLR 17 0 Q92613;F2Z2B6;F2Z3N8 Q92613 JADE3 Protein Jade-3 1 GVQVPAS(0.018)PDT(0.982)VPQPSLR 194.32 2.09E-07 6129300 32335 33876 26614 36116 29408 39753 43837 27443 31335 37646 TRUE FALSE 34810.59246 32193.7671 27501.29748 33165.20727 28253.29416 41265.82827 38081.14924 31029.89433 34060.46166 36417.6141 0.955872407 0.884016372 0.755164723 0.910691381 0.77581398 1.133128276 1.04567941 0.85205731 0.935274386 1 15.15234879 -6.742205401 24.99999836 0.987259751 0.855252743 0.379925396 0.087285905 291.604949 379022.3834 0.03034437 0.030299142 1.81E-07 6.742205401 -0.132007007 GVQVPVS(ph)PGTIPQPVAR ddPTM_A459_MK2206_30min_R2 2 GVQVPVSPGTIPQPVAR 17 0 Q6IE81-2;Q6IE81;Q6IE81-3;D6RCS1;D6RC05;D6RBB3;D6RFK0;D6RGE7 Q6IE81-2 JADE1 Protein Jade-1 1 GVQVPVS(0.988)PGT(0.012)IPQPVAR;GVQVPVS(0.96)PGT(0.04)IPQPVAR 226.06 3.66E-16 28459000 76649 99002 90301 105113 103275 96783 104866 82461 87673 85679 TRUE FALSE 82517.30637 94085.70464 93311.59027 96524.93166 99219.90458 100466.1449 91096.96823 93238.93583 95298.63906 82883.30125 0.995584215 1.13515875 1.125818939 1.164588406 1.197103676 1.21213976 1.099099178 1.124942352 1.149792994 1 16.33879385 -4.758537328 4.99783462 1.14277168 0.985756615 0.349086257 0.055845458 0.187735288 12.27622737 0.01351399 0.104165045 1.74E-05 4.758537328 -0.157015066 GVS(ph)MPNMLEPK ddPTM_A459_MK2206_30min_R1 2 GVSMPNMLEPK 11 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 GVS(1)MPNMLEPK;GVS(1)MPNMLEPK 173.59 0.00018083 89097000 16213.7 15349.5 13746 12423.6 12735.9 10493.2 12604.5 11760.9 12927.2 10702.6 TRUE FALSE 14834.63967 14350.24476 12812.95982 13380.46782 12228.60213 11087.31592 11763.6768 11658.07569 14271.0287 12028.51889 1.23328897 1.193018433 1.065215089 1.112395296 1.016634072 0.92175238 0.977982153 0.969202925 1.186432746 1 13.55417139 -5.282136297 0.998977757 1.00773785 1.272496407 0.542417241 0.069469761 0.772420452 1.043415509 0.025374496 0.184799404 5.22E-06 5.282136297 0.264758557 GVS(ph)MPNMLEPK ddPTM_A459_MK2206_30min_R2 4 GVSMPNMLEPK 11 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 GVS(1)MPNMLEPK;GVS(1)MPNMLEPK;GVS(1)MPNMLEPK;GVS(1)MPNMLEPK 146.67 0.00068001 47279100 304466 291159 252803 280013 257983 226421 304567 234522 218102 257199 TRUE FALSE 327776.1511 276700.4674 261231.3258 257135.0422 247853.2912 235037.6098 264576.987 265174.8306 237072.1177 248806.6177 1.317393219 1.112110562 1.049937209 1.033473485 0.996168404 0.9446598 1.063384043 1.065786887 0.952836866 1 17.92466533 -4.049693444 1.029611098 1.00864336 2.271429045 0.859043714 0.03789274 2.528362432 0.733581372 0.012437157 5.052319758 8.92E-05 4.049693444 1.262785685 GVS(ph)PSQAQGLGSNLVTEVR ddPTM_A459_MK2206_30min_R1 4 GVSPSQAQGLGSNLVTEVR 19 0 U3KQS6;A0A0A0MQU7;F5H0K0;A0A0A0MTK8;P20823-3;P20823-2;P20823;P20823-7;P20823-6 U3KQS6 HNF1A Hepatocyte nuclear factor 1-alpha 1 GVS(0.534)PS(0.466)QAQGLGSNLVTEVR;GVS(0.993)PS(0.007)QAQGLGSNLVTEVR;GVS(0.655)PS(0.345)QAQGLGSNLVTEVR;GVS(0.993)PS(0.007)QAQGLGSNLVTEVR 274.17 4.36E-59 43351800 2847.13 2721.37 2482.74 2364.16 3068.08 2487.75 2854.91 2480.02 2651.61 2120.55 TRUE FALSE 2604.966643 2544.208318 2314.218526 2546.248013 2945.871877 2628.604255 2664.464163 2458.337447 2927.254348 2383.259743 1.093026746 1.067532956 0.971030763 1.068388798 1.236068324 1.102944932 1.117991512 1.031502107 1.228256532 1 11.21872048 -6.012548813 24.95689239 1.123053905 1.041810321 0.175541398 0.074892168 936.5073799 1862517.927 0.021030687 0.028646578 9.72E-07 6.012548813 -0.081243585 GVS(ph)PSQAQGLGSNLVTEVR ddPTM_A459_MK2206_30min_R2 3 GVSPSQAQGLGSNLVTEVR 19 0 U3KQS6;A0A0A0MQU7;F5H0K0;A0A0A0MTK8;P20823-3;P20823-2;P20823;P20823-7;P20823-6 U3KQS6 HNF1A Hepatocyte nuclear factor 1-alpha 1 GVS(0.952)PS(0.048)QAQGLGSNLVTEVR;GVS(0.97)PS(0.03)QAQGLGSNLVTEVR;GVS(0.749)PS(0.251)QAQGLGSNLVTEVR 216.16 5.09E-19 27167800 19895.6 22204.2 21278 23362.5 22508.3 21923 24230.2 18049.8 17450.6 22653.9 TRUE FALSE 21418.82243 21101.57172 21987.3979 21453.70902 21624.51105 22757.29513 21048.74563 20408.97083 18968.42164 21914.7051 0.97737215 0.962895536 1.003317079 0.978964076 0.986758022 1.038448614 0.960485005 0.931291146 0.865556783 1 14.41961164 -7.618155491 3.723227998 0.923929396 0.99038627 0.344194904 0.035903308 0.229137656 6.104068509 0.017839664 0.009677967 2.41E-08 7.618155491 0.066456875 GVS(ph)QEKEAQISSAIVSSVQSK ddPTM_A459_MK2206_30min_R1 2 GVSQEKEAQISSAIVSSVQSK 21 1 Q12872;Q12872-2 Q12872 SFSWAP "Splicing factor, suppressor of white-apricot homolog" 1 GVS(0.669)QEKEAQIS(0.266)S(0.064)AIVS(0.002)SVQSK;GVS(0.614)QEKEAQIS(0.289)S(0.097)AIVSSVQSK 80.303 0.0011061 43196000 5159.4 5051.2 6026.1 6098.4 6268 4628.6 4370 6729.6 3281.1 2047.01 TRUE FALSE 4720.565937 4722.365962 5617.065122 6568.099825 6018.332287 4890.667332 4078.485274 6670.763817 3622.182087 2300.609053 2.051876624 2.052659036 2.441555689 2.854939572 2.615973487 2.125814173 1.772785023 2.899564273 1.574444855 1 11.16780013 -8.499244764 5.555888237 1.001175617 2.341104332 0.622015892 0.346448923 0.099707531 10.37131902 0.348327612 0.09040939 3.17E-09 8.499244764 1.339928715 GVS(ph)QEKEAQISSAIVSSVQSK ddPTM_A459_MK2206_30min_R2 2 GVSQEKEAQISSAIVSSVQSK 21 1 Q12872;Q12872-2 Q12872 SFSWAP "Splicing factor, suppressor of white-apricot homolog" 1 GVS(0.998)QEKEAQIS(0.002)S(0.001)AIVSSVQSK;GVS(0.921)QEKEAQIS(0.062)S(0.013)AIVS(0.004)SVQSK 70.538 0.0033526 18122900 26505 92149 59034 82272 109764 78699 87111 61925 85927 56677 TRUE FALSE 28534.24318 87573.01466 61002.1641 75550.11442 105454.1138 81693.94559 75673.22106 70018.81012 93400.77514 54827.63413 0.520435427 1.597242267 1.112617115 1.377956857 1.923375238 1.490014057 1.380202197 1.277071521 1.703534661 1 15.7426156 -4.755534232 24.99724498 1.442102479 0.520433935 0.527031821 0.25797889 152.4988021 645482.6906 0.063268926 0.556365694 1.76E-05 4.755534232 -0.921668544 GVS(ph)SESSGDREK ddPTM_A459_MK2206_30min_R1 1 GVSSESSGDREK 12 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 GVS(0.499)S(0.499)ES(0.001)SGDREK 138.2 0.0059829 8691900 4173.1 3920.9 3718.2 3344.6 3259.3 3104.5 3983.9 4458.7 1096.2 2447.5 TRUE FALSE 3818.155931 3665.648697 3465.818943 3602.201672 3129.475179 3280.274107 3718.1413 4419.718056 1210.153913 2750.714778 1.388059555 1.33261679 1.259970307 1.309551139 1.137695266 1.19251699 1.351700049 1.606752576 0.439941619 1 11.42559084 -8.262382741 24.99999996 0.719970809 1.310687952 0.659572418 0.17294531 49.43462896 1309962.554 0.134201511 0.04235231 5.47E-09 8.262382741 0.590717144 GVS(ph)SSFDMPK ddPTM_A459_MK2206_30min_R2 1 GVSSSFDMPK 10 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 GVS(0.961)S(0.002)S(0.038)FDMPK 140.78 0.0013808 2479600 32282 66979 36789 45384 37938 40161 41601 46667 37029 29223 TRUE FALSE 34753.53474 63652.92026 38015.5269 41675.98202 36448.3635 41689.355 36138.73873 52766.53713 40249.71549 28269.4559 1.229366949 2.251649995 1.344756228 1.474240685 1.289319597 1.474713738 1.278366971 1.866556516 1.42378812 1 14.7869565 -11.7157239 1.447645217 7.50E-05 1.525823699 0.209356706 0.299406787 153591.0592 24690.43489 500995.902 0.081157416 1.92E-12 11.7157239 1.525748743 GVSMS(ph)LPSSPLLPR ddPTM_A459_MK2206_30min_R1 2 GVSMSLPSSPLLPR 14 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 GVS(0.041)MS(0.946)LPS(0.013)S(0.001)PLLPR;GVS(0.388)MS(0.599)LPS(0.013)SPLLPR 121.76 0.0018732 14035500 2948.3 3438.6 3605.8 2739.5 3731 3094.3 3589.4 3354.4 3195.4 2241.99 TRUE FALSE 2697.531603 3214.746515 3361.048342 2950.496765 3582.386369 3269.496592 3349.957675 3325.072834 3527.573265 2519.744647 1.070557529 1.275822341 1.333884505 1.170950702 1.421725957 1.297550764 1.329483001 1.319607063 1.39997252 1 11.29906182 -4.764715329 4.379995476 1.298957674 1.050741672 0.225909542 0.11559824 0.275848832 11.23036991 0.026520842 0.217450851 1.72E-05 4.764715329 -0.248216003 GVSMS(ph)LPSSPLLPR ddPTM_A459_MK2206_30min_R2 1 GVSMSLPSSPLLPR 14 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 GVS(0.001)MS(0.933)LPS(0.054)S(0.011)PLLPR 101.61 0.0081704 4738200 7335.2 9148.1 6448.3 8172.4 8190.2 7912.4 9028.5 6235.4 6843.1 7976.7 TRUE FALSE 7896.788552 8693.818657 6663.283104 7504.688778 7868.611596 8213.511926 7843.047105 7050.388189 7438.300469 7716.420932 1.023374518 1.126664646 0.863519909 0.972560834 1.01972296 1.064419891 1.016409962 0.913686313 0.963957323 1 12.91371613 -7.73603586 24.84322092 0.954116351 1.01180411 0.118539996 0.065987987 429.4566965 419985.091 0.032424325 0.018710472 1.84E-08 7.73603586 0.057687759 GVSMSLPS(ph)SPLLPR ddPTM_A459_MK2206_30min_R2 1 GVSMSLPSSPLLPR 14 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 GVS(0.004)MS(0.166)LPS(0.415)S(0.415)PLLPR 104.7 0.023054 4824700 33535 36504 34724 34616 36193 35895 33304 27736 31868 32287 TRUE FALSE 36102.46538 34691.26444 35881.68083 31787.76207 34771.88096 37261.00938 28931.14479 31361.19043 34639.82104 31233.47783 1.155890022 1.110707704 1.148821179 1.017746478 1.113288797 1.192983041 0.92628637 1.004088965 1.109060644 1 14.9308056 -6.437289321 0.362787943 1.004484443 1.166433763 0.259347593 0.069798564 3.048677469 0.730359133 0.079405116 0.193772675 3.65E-07 6.437289321 0.16194932 GVSMSLPSS(ph)PLLPR ddPTM_A459_MK2206_30min_R1 2 GVSMSLPSSPLLPR 14 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 GVSMSLPS(0.035)S(0.965)PLLPR;GVSMSLPS(0.036)S(0.964)PLLPR 226.23 4.38E-13 55074000 9257.4 8823 9068.2 7680.4 9880 9861.1 10875.4 8722.9 9632.4 8235.7 TRUE FALSE 8470.009517 8248.621096 8452.675849 8271.945739 9486.458679 10419.42696 10149.92191 8646.636605 10633.72245 9256.000692 0.915083069 0.891164702 0.913210374 0.89368465 1.024898225 1.125694272 1.096577479 0.93416551 1.148846333 1 13.17617326 -6.343647772 4.156568866 1.060368372 0.90282031 0.624076395 0.058103454 0.150398094 4.825068643 0.01809555 0.020877895 4.53E-07 6.343647772 -0.157548062 GVSMSLPSS(ph)PLLPR ddPTM_A459_MK2206_30min_R2 2 GVSMSLPSSPLLPR 14 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 GVSMSLPS(0.221)S(0.779)PLLPR;GVSMS(0.001)LPS(0.285)S(0.714)PLLPR 101.61 0.0081704 46351000 99544 105559 110477 128038 125502 130776 129577 113629 120910 121562 TRUE FALSE 107165.1652 100317.0936 114160.248 117576.8858 120574.1609 135752.7723 112563.3843 128480.7004 131426.5332 117595.4419 0.911303733 0.853069574 0.970788036 0.999842204 1.025330225 1.154405053 0.957208736 1.09256531 1.11761588 1 16.84347262 -5.705974936 1.373941241 1.062929168 0.877342611 0.592540363 0.056501698 0.303569313 1.131192814 0.01848807 0.048280352 1.97E-06 5.705974936 -0.185586557 GVSNDTS(ph)SLETER ddPTM_A459_MK2206_30min_R2 1 GVSNDTSSLETER 13 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A0A0G2JRR0 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 GVSNDT(0.128)S(0.436)S(0.436)LETER 171.11 0.00021036 6128200 28477 27352 27299 36335 29580 33309 34942 24970 29168 32207 TRUE FALSE 30657.22102 25993.73945 28209.13503 33366.31427 28418.54057 34576.59734 30354.07343 28233.66473 31704.97992 31156.08823 0.983988131 0.834306902 0.905413248 1.070940422 0.912134423 1.109786218 0.974258168 0.906200564 1.017617478 1 14.92722649 -5.643607304 10.07949538 0.994742939 0.899439431 0.269791565 0.067875 0.385332868 32.10581907 0.017874299 0.030977306 2.27E-06 5.643607304 -0.095303508 GVSPS(ph)QAQGLGSNLVTEVR ddPTM_A459_MK2206_30min_R2 1 GVSPSQAQGLGSNLVTEVR 19 0 U3KQS6;A0A0A0MQU7;F5H0K0;A0A0A0MTK8;P20823-3;P20823-2;P20823;P20823-7;P20823-6 U3KQS6 HNF1A Hepatocyte nuclear factor 1-alpha 1 GVS(0.41)PS(0.59)QAQGLGSNLVTEVR 182 3.37E-13 16758000 6386.1 9897 7682.3 7691.4 8032.7 8088.6 8606.2 8112.2 6847.9 6108.3 TRUE FALSE 6875.024726 9405.529372 7938.424048 7062.988016 7717.295837 8396.417341 7476.195602 9172.492393 7443.517964 5908.986671 1.163486247 1.591733049 1.343449307 1.19529598 1.30602695 1.420957231 1.265224652 1.552295326 1.259694492 1 12.52869503 -8.541452828 22.75671806 0.999999991 1.357815103 0.39967372 0.131211524 1123.076125 1375977.743 0.122205021 0.031553201 2.87E-09 8.541452828 0.357815112 GVSSS(ph)FDMPK ddPTM_A459_MK2206_30min_R2 1 GVSSSFDMPK 10 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 GVS(0.107)S(0.105)S(0.788)FDMPK 84.31 0.03805 3720300 29886 50727 36043 37699 28730 34682 44037 41370 34650 25933 TRUE FALSE 32174.09514 48207.97094 37244.65563 34618.87111 27601.91584 36001.84781 38254.889 46777.20104 37663.79437 25086.80833 1.282510502 1.921646241 1.484631091 1.379963152 1.100256178 1.435090799 1.524900597 1.864613482 1.501338626 1 14.61464132 -11.45397332 2.520113864 0.660929303 1.505763342 0.294218918 0.231875523 7722870.963 3804378.749 15392646.12 0.062695433 3.52E-12 11.45397332 0.844834039 GVSTVIDAAS(ph)GTFDR ddPTM_A459_MK2206_30min_R1 1 GVSTVIDAASGTFDR 15 0 K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6;Q9H6U6-8;Q9H6U6-3;Q9H6U6-7 K7ESE9;Q9H6U6-8 BCAS3 Breast carcinoma-amplified sequence 3 1 GVSTVIDAAS(0.97)GT(0.03)FDR 97.797 0.0092952 3695700 1928 1555.5 1696.8 1930.1 1654.5 1139.1 1479.3 1636.6 1393.5 1216.8 TRUE FALSE 1764.013476 1454.236667 1581.625944 2078.756636 1588.597762 1203.594858 1380.618596 1622.291379 1538.359312 1367.54637 1.28991127 1.063391121 1.156542826 1.520062999 1.161640874 0.880112648 1.00955889 1.186278882 1.12490468 1 10.41737404 -6.527558021 24.99899007 1.046675344 1.249460157 0.375024554 0.13229733 161.9607741 865264.5043 0.046366564 0.046536218 2.97E-07 6.527558021 0.202784813 GVSTVIDAAS(ph)GTFDR ddPTM_A459_MK2206_30min_R2 2 GVSTVIDAASGTFDR 15 0 K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6;Q9H6U6-8;Q9H6U6-3;Q9H6U6-7 K7ESE9;Q9H6U6-8 BCAS3 Breast carcinoma-amplified sequence 3 1 GVSTVIDAAS(0.997)GT(0.003)FDR;GVSTVIDAAS(0.986)GT(0.014)FDR 153.09 0.00021437 4904200 27540 24147 19174.6 27330 22425 24379 24937 17005.2 18641.7 27507 TRUE FALSE 29648.48357 22947.89509 19813.87159 25097.05158 21544.48182 25306.75993 21662.74195 19227.83803 20263.12137 26609.44884 1.114208857 0.862396483 0.744617888 0.943163149 0.80965532 0.951044123 0.814099611 0.722594374 0.76150098 1 14.69965101 -4.767421258 4.861486607 0.836498191 1.13194083 0.449386723 0.08918302 0.155972382 9.233916071 0.022010143 0.157413795 1.71E-05 4.767421258 0.295442639 GVT(ph)PAGFPK ddPTM_A459_MK2206_30min_R2 2 GVTPAGFPK 9 0 Q8WX93;Q8WX93-3;Q8WX93-4;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 GVT(1)PAGFPK;GVT(1)PAGFPK 142.36 0.0049732 24519000 226287 217477 219684 258802 259587 177885 224722 146992 150915 238712 TRUE FALSE 243611.7067 206677.4084 227008.1549 237657.0487 249394.3101 184654.5383 195215.7315 166204.3591 164041.3139 230922.847 1.054948481 0.895006324 0.983047619 1.029162129 1.07998976 0.799637371 0.845372097 0.71973978 0.71037282 1 17.81705139 -6.775637942 24.97445388 0.799404815 1.001871049 0.54119006 0.088353632 175.761002 309151.5473 0.030810442 0.027298856 1.68E-07 6.775637942 0.202466234 GVTDHTQR ddPTM_A459_MK2206_30min_R2 1 GVTDHTQR 8 0 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8Y5T0;A0A2R8Y542 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 131.22 0.0069341 0 2355 833.62 2177.2 707.13 1197.5 1961.6 2296.5 7584.1 4682.2 2623.6 FALSE TRUE 2535.300611 792.223643 2249.786761 649.355217 1150.480133 2036.250063 1994.966791 8575.36791 5089.449293 2537.992147 0.998939502 0.312145821 0.886443547 0.255853911 0.453303267 0.802307472 0.786041357 3.378800017 2.005305374 1 11.30947189 -7.639658821 8.16638415 2.263013883 0.609857121 0.574041985 0.584319821 0.146261416 9.806392698 0.258731672 0.148654041 2.29E-08 7.639658821 -1.653156762 GVTEAIQNFS(ph)FR ddPTM_A459_MK2206_30min_R2 1 GVTEAIQNFSFR 12 0 E3W994;J3KR49;O75122;A0A0U1RQI6;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 GVTEAIQNFS(1)FR 98.253 0.015454 1841100 5612.4 5225.9 6030.9 3935.2 3898.9 2804 5197.9 4477.5 5061.7 6266.3 TRUE FALSE 6042.089659 4966.389405 6231.967196 3613.681572 3745.809596 2910.708185 4515.409486 5062.724624 5501.957517 6061.831144 0.996743313 0.819288642 1.028066775 0.596136957 0.617933675 0.48016979 0.744891994 0.83518074 0.907639521 1 12.56553795 -5.756840218 24.99946014 0.717668092 0.935158486 0.26726437 0.154053105 155.2426909 843832.4685 0.044118375 0.073281524 1.75E-06 5.756840218 0.217490395 GVTECYECHPKPTQR ddPTM_A459_MK2206_30min_R1 1 GVTECYECHPKPTQR 15 1 K7EPL2;Q9UBT2-2;Q9UBT2 K7EPL2 UBA2 SUMO-activating enzyme subunit 2 0 86.467 0.015656 3725100 1941.7 1965.3 1846.8 1843.7 2090.4 1630.2 1934.4 2053.6 1657.7 1501.7 FALSE TRUE 1776.548219 1837.358613 1721.444361 1985.702093 2007.134942 1722.500515 1805.359706 2035.645592 1830.023847 1687.741933 1.052618403 1.088649027 1.019968946 1.176543673 1.189242799 1.020594726 1.069689429 1.206135578 1.084303122 1 10.72087861 -5.744299822 24.99963567 1.113549621 1.057235833 0.109060272 0.067067142 535.0637135 780433.8079 0.018327908 0.031649318 1.80E-06 5.744299822 -0.056313788 GVTECYECHPKPTQR ddPTM_A459_MK2206_30min_R2 1 GVTECYECHPKPTQR 15 1 K7EPL2;Q9UBT2-2;Q9UBT2 K7EPL2 UBA2 SUMO-activating enzyme subunit 2 0 85.536 0.016421 3042600 15854 14424 11859 17965 15831 15633 17163 14458 12227 15595 FALSE TRUE 17067.79443 13707.72513 12254.37314 16497.20203 15209.3954 16227.92477 14909.47748 16347.71024 13290.48236 15086.13643 1.13135623 0.908630596 0.812293671 1.093533928 1.008170347 1.075684609 0.988289981 1.083624712 0.880973231 1 13.88093576 -4.739578608 24.76318614 0.987975022 1.131356855 0.201777595 0.087832758 2818.222941 3192208.822 0.0224426 1.084223068 1.82E-05 4.739578608 0.143381833 GVTIPYRPKPS(ph)SSPVIFAGGQDR ddPTM_A459_MK2206_30min_R2 1 GVTIPYRPKPSSSPVIFAGGQDR 23 2 Q15366;Q15366-2;Q15366-6;Q15366-3;H3BSS4 Q15366 PCBP2 Poly(rC)-binding protein 2 1 GVTIPYRPKPS(0.333)S(0.333)S(0.333)PVIFAGGQDR 57.985 0.01697 132570000 72767 79977 57766 45644 59975 49723 58582 44433 29381 33489 TRUE FALSE 78338.09747 76005.45848 59691.88961 41914.73919 57620.08015 51615.24361 50890.11303 50240.54566 31936.50627 32396.25667 2.418121892 2.346118542 1.842555151 1.29381427 1.778603026 1.59324715 1.57086399 1.550813298 0.985808533 1 14.9835395 -1.522878745 0.23482612 1.101068614 9.144377352 0.778286404 0.217649915 25.288905 0.334424356 0.328115634 78.70738839 0.03 1.522878745 8.043308738 up GVTIPYRPKPSS(ph)SPVIFAGGQDR ddPTM_A459_MK2206_30min_R1 1 GVTIPYRPKPSSSPVIFAGGQDR 23 2 Q15366;Q15366-2;Q15366-6;Q15366-3;H3BSS4 Q15366 PCBP2 Poly(rC)-binding protein 2 1 GVT(0.002)IPY(0.012)RPKPS(0.115)S(0.436)S(0.436)PVIFAGGQDR 43.604 0.034962 404740000 6889.3 6618.3 6654.3 7545.8 6234.4 5487.2 5997.9 6596.9 5984.6 5011.2 TRUE FALSE 6303.328858 6187.447467 6202.624656 8126.978823 5986.070646 5797.880522 5597.791035 6539.223999 6606.720586 5632.025289 1.119193991 1.098618552 1.101313353 1.442994022 1.062862885 1.029448595 0.993921502 1.161078593 1.173063019 1 12.4594381 GVTIPYRPKPSSS(ph)PVIFAGGQDR ddPTM_A459_MK2206_30min_R1 1 GVTIPYRPKPSSSPVIFAGGQDR 23 2 Q15366;Q15366-2;Q15366-6;Q15366-3;H3BSS4 Q15366 PCBP2 Poly(rC)-binding protein 2 1 GVT(0.007)IPY(0.086)RPKPS(0.099)S(0.387)S(0.422)PVIFAGGQDR 57.058 0.006485 480100000 3513.8 3846.5 4325.6 3670.8 4189.4 3649.4 3896.2 3930.4 3488.5 3497.7 TRUE FALSE 3214.932858 3596.092151 4031.990324 3953.525652 4022.527327 3856.025874 3636.291607 3896.036927 3851.142059 3931.021482 0.817836502 0.914798397 1.025685141 1.005724764 1.02327788 0.980922107 0.925024608 0.991100391 0.979679729 1 11.94068853 -4.925701119 2.99686326 0.989745209 0.812823547 0.797529027 0.027321726 0.137928847 2.181545649 0.007770189 0.049981929 1.19E-05 4.925701119 -0.176921662 GVVDSDDLPLNVSR ddPTM_A459_MK2206_30min_R2 2 GVVDSDDLPLNVSR 14 0 P14625 P14625 HSP90B1 Endoplasmin 0 ; 198.32 0.0013143 37948000 106482 110577 103804 111225 111689 124944 116402 90175 96903 110402 FALSE TRUE 114634.3438 105085.907 107264.7736 102137.5617 107303.5287 129698.8315 101118.2776 101961.1821 105331.4478 106799.5918 1.073359382 0.983954201 1.004355651 0.956347866 1.004718528 1.214413176 0.946803971 0.954696366 0.986253281 1 16.70454661 GVVDSEDLPLNISR ddPTM_A459_MK2206_30min_R1 3 GVVDSEDLPLNISR 14 0 P07900;P07900-2;P08238 P07900;P08238 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta 0 ;; 219.74 1.20E-07 79950500 5510.49 5996.92 6469.7 6270.03 6794.26 5844.29 6420.43 6211.79 5235.35 5157.59 FALSE TRUE 5041.793889 5606.519418 6030.55479 6752.948797 6523.630237 6175.188649 5992.134829 6157.480975 5779.583367 5796.551187 0.869792007 0.967216408 1.040369453 1.164994249 1.125433042 1.065321163 1.033741381 1.062266299 0.997072773 1 12.50097907 -5.014521323 2.191986823 1.069266125 0.862267467 0.604362554 0.049232858 0.284243501 2.216637248 0.014338975 0.095631355 9.67E-06 5.014521323 -0.206998658 GVVDSEDLPLNISR ddPTM_A459_MK2206_30min_R2 4 GVVDSEDLPLNISR 14 0 P07900;P07900-2;P08238 P07900;P08238 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta 0 ;;; 212.68 3.60E-05 60000000 98568 136448 115167 147465 132384 125577 145673 118901 113527 115257 FALSE TRUE 106114.4419 129672.1907 119006.6103 135416.6378 127185.939 130355.9207 126545.9601 134441.7689 123401.3733 111496.1735 0.951731692 1.163019202 1.067360489 1.214540674 1.140720214 1.16915152 1.134980297 1.205797156 1.106776756 1 16.76663467 -4.75755101 24.96065299 1.141862171 0.951731412 0.437257027 0.061251294 93.60095197 600766.9141 0.013939615 0.102354223 1.75E-05 4.75755101 -0.190130759 GVVHDDMECSHYMK ddPTM_A459_MK2206_30min_R1 2 GVVHDDMECSHYMK 14 0 P50579-3;P50579;F8VQZ7;F8VRR3;P50579-2 P50579-3 METAP2 Methionine aminopeptidase 2 0 ; 116.03 0.0014648 7056900 6369.8 5808.5 6351.5 4887.7 6463.7 6150.4 6103.1 5757.8 4887.8 4683.7 FALSE TRUE 5828.015061 5430.365594 5920.377876 5264.151501 6206.237142 6498.630333 5695.973335 5707.460162 5395.904301 5263.952116 1.107155789 1.03161379 1.124702077 1.000037877 1.179007142 1.234553467 1.082071647 1.084253815 1.025067132 1 12.36193065 -8.239435891 2.017882323 1.001229733 1.109051886 0.271953831 0.062777487 0.478084712 3.543134905 0.062306208 0.018347766 5.76E-09 8.239435891 0.107822153 GVVIPTWNIS(ph)PIKK ddPTM_A459_MK2206_30min_R1 1 GVVIPTWNISPIKK 14 1 Q3T8J9-3;Q3T8J9;A0A087WUE6;Q3T8J9-2;A4PB68 Q3T8J9-3 GON4L GON-4-like protein 1 GVVIPT(0.001)WNIS(0.999)PIKK 78.848 0.019125 9487200 4919.9 4730.1 4794 4328.8 3852.2 3463.7 4404.9 4078.7 3541.1 3884.9 TRUE FALSE 4501.43667 4422.16963 4468.596637 4662.204926 3698.758717 3659.811701 4111.057158 4043.040356 3909.210017 4366.190741 1.030975726 1.01282099 1.023454288 1.067796897 0.847136311 0.838216175 0.941566093 0.925988028 0.895336518 1 12.09215944 -6.256250698 24.99696829 0.902524983 1.03152993 0.647266998 0.045345508 270.8803226 1304991.184 0.013758812 0.017229618 5.54E-07 6.256250698 0.129004947 GVVIPTWNIS(ph)PIKK ddPTM_A459_MK2206_30min_R2 2 GVVIPTWNISPIKK 14 1 Q3T8J9-3;Q3T8J9;A0A087WUE6;Q3T8J9-2;A4PB68 Q3T8J9-3 GON4L GON-4-like protein 1 GVVIPT(0.015)WNIS(0.985)PIKK;GVVIPT(0.004)WNIS(0.996)PIKK 66.977 0.034703 18728800 111823 122726 119661 114688 121340 97715 139224 101340 102081 136898 TRUE FALSE 120384.2549 116631.6053 123650.438 105317.6235 116575.5819 101433.6128 120943.7216 114585.486 110959.8209 132431.0295 0.909033595 0.880696962 0.933696872 0.795263949 0.880273924 0.765935394 0.913258185 0.865246509 0.837868748 1 17.01488167 -11.17207862 5.764423106 1.001291732 0.864064536 0.39874791 0.049880598 0.000820091 4.99E-05 0.047831907 0.011495101 6.73E-12 11.17207862 -0.137227196 GVVPLAGTDGETTTQGLDGLSER ddPTM_A459_MK2206_30min_R2 1 GVVPLAGTDGETTTQGLDGLSER 23 0 P09972;K7EKH5;C9J8F3;J3KSV6;J3QKP5;A8MVZ9 P09972 ALDOC Fructose-bisphosphate aldolase C;Fructose-bisphosphate aldolase 0 149.35 1.59E-07 0 12222 19311 13453 17399 19807 16501 20168 14098 10351 15872 FALSE TRUE 13157.72572 18352.04382 13901.51631 15977.44604 19029.27766 17128.95712 17519.91737 15940.65701 11251.31127 15354.09794 0.856952051 1.195253794 0.905394531 1.040598159 1.239361487 1.115595145 1.141058071 1.038202118 0.732788817 1 13.90633614 -8.09171197 7.209536571 0.868659307 1.077056745 0.286695367 0.126845456 0.321262598 21.83913622 0.083870652 0.031402482 8.10E-09 8.09171197 0.208397438 GVVPLAGTNGETTTQGLDGLSER ddPTM_A459_MK2206_30min_R1 2 GVVPLAGTNGETTTQGLDGLSER 23 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8;H3BU78 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ; 268.13 1.30E-64 11273700 3556.5 3061.88 3763.9 2666.16 4113.9 3612.2 3356.2 3739.2 3206.34 2886.57 FALSE TRUE 3254.000999 2862.551055 3508.416955 2871.508105 3950.034652 3816.719642 3132.314022 3706.508569 3539.650517 3244.180084 1.003027241 0.882365029 1.081449508 0.885125989 1.217575643 1.176482052 0.965517925 1.142510117 1.091077075 1 11.66363819 -6.252718567 24.99985188 1.103199928 0.965694134 0.361568044 0.088305683 718.0493977 2058424.067 0.025740111 0.032721844 5.59E-07 6.252718567 -0.137505793 GVVPLAGTNGETTTQGLDGLSER ddPTM_A459_MK2206_30min_R2 3 GVVPLAGTNGETTTQGLDGLSER 23 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8;H3BU78 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ;; 231.06 7.35E-57 2609400 39948.2 44295.2 38411.4 47321 48755.3 48770.7 42757.4 37840 40022.9 40718.6 FALSE TRUE 43006.66491 42095.56478 39692.0169 43454.72293 46840.92195 50626.70316 37143.30202 42785.81792 43504.0195 39389.95542 1.091818065 1.0686878 1.00766849 1.103192996 1.18915905 1.28526937 0.942963799 1.086211382 1.104444497 1 15.26554016 -9.17872834 0.732070338 0.999200206 1.102467183 0.101412482 0.087535832 6.297541401 4.842589375 0.118133704 0.033643829 6.63E-10 9.17872834 0.103266977 GWAFGS(ph)NSLPIAGSVGMGVAR ddPTM_A459_MK2206_30min_R1 1 GWAFGSNSLPIAGSVGMGVAR 21 0 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 SAMD4B Protein Smaug homolog 2 1 GWAFGS(0.977)NS(0.023)LPIAGSVGMGVAR 267.69 5.38E-114 0 2870.2 2384.1 2496.6 2348.3 2854.9 2366.8 2597.8 2299.3 2299.9 1966.8 TRUE FALSE 2626.074418 2228.894657 2327.137748 2529.166473 2741.183288 2500.806171 2424.505502 2279.197463 2538.982835 2210.462033 1.188020594 1.008338811 1.052783406 1.144180011 1.240095169 1.131349977 1.096832004 1.031095504 1.148620876 1 11.11013224 -9.725446148 0.585282313 0.990244507 1.117144787 0.204349522 0.067868436 11.45377582 3.94326507 0.339089279 0.030612065 1.88E-10 9.725446148 0.12690028 GWAFGS(ph)NSLPIAGSVGMGVAR ddPTM_A459_MK2206_30min_R2 2 GWAFGSNSLPIAGSVGMGVAR 21 0 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 SAMD4B Protein Smaug homolog 2 1 GWAFGS(0.778)NS(0.219)LPIAGS(0.004)VGMGVAR;GWAFGS(0.54)NS(0.46)LPIAGSVGMGVAR 103.2 0.00019163 26452000 47623 56657 46043 54270 47169 48776 50710 43284 50718 40158 TRUE FALSE 51269.0535 53843.49577 47578.05064 49835.9674 45316.90805 50632.20486 44051.71609 48941.36742 55129.35996 38847.64775 1.319746663 1.386016886 1.224734402 1.282856757 1.16652901 1.30335317 1.133960964 1.259828336 1.419117068 1 15.24553962 -11.08828471 3.204582131 0.988998173 1.271932626 0.494177148 0.08401877 63381708.02 81825013.87 6045643.272 0.021294111 8.16E-12 11.08828471 0.282934454 GWAFGSNS(ph)LPIAGSVGMGVAR ddPTM_A459_MK2206_30min_R2 4 GWAFGSNSLPIAGSVGMGVAR 21 0 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 SAMD4B Protein Smaug homolog 2 1 GWAFGS(0.034)NS(0.962)LPIAGS(0.004)VGMGVAR;GWAFGS(0.007)NS(0.992)LPIAGS(0.001)VGMGVAR;GWAFGS(0.01)NS(0.99)LPIAGS(0.001)VGMGVAR;GWAFGS(0.001)NS(0.999)LPIAGSVGMGVAR 117.03 0.00052985 17917500 85454 91278.59 73526.98 86083.31 69082.22 88044.67 79291.61 63397.33 72942 72665.1 TRUE FALSE 91996.42394 86745.82795 75978.33282 79050.02821 66369.70493 91395.27161 68880.52636 71683.57871 79286.36331 70294.04374 1.308737114 1.234042365 1.080864448 1.124562253 0.944172527 1.300185147 0.979891363 1.019767464 1.127924346 1 16.10111483 -5.110371283 2.006793875 1.071826724 1.320802941 0.420912418 0.095369674 0.401737394 2.690429991 0.025525283 0.143069004 7.76E-06 5.110371283 0.248976216 GWAFGSNSLPIAGS(ph)VGMGVAR ddPTM_A459_MK2206_30min_R1 1 GWAFGSNSLPIAGSVGMGVAR 21 0 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 SAMD4B Protein Smaug homolog 2 1 GWAFGSNS(0.19)LPIAGS(0.81)VGMGVAR 119.21 0.0002834 12606000 2961.4 2336.6 2096.3 1904.5 2342.3 2034.2 2026.2 1995.2 1694 1565.1 TRUE FALSE 2709.517379 2184.486915 1954.008997 2051.18492 2249.001231 2149.374646 1891.035895 1977.756177 1870.097362 1758.996404 1.540376872 1.241893906 1.110865828 1.166110923 1.278570682 1.221932371 1.075065242 1.124366242 1.063161561 1 10.78053682 -4.771139957 2.618542175 1.142608593 1.628757488 0.723089469 0.07630359 0.28268028 2.47779829 0.020625583 0.310895454 1.69E-05 4.771139957 0.486148896 GWDS(ph)SHEDDLPVYLAR ddPTM_A459_MK2206_30min_R1 1 GWDSSHEDDLPVYLAR 16 0 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GWDS(0.5)S(0.5)HEDDLPVYLAR 67.153 0.033877 3347700 1395.6 1172.1 1297.9 1195 1021.4 1154.7 1305.8 1207.4 1065.9 1534.6 TRUE FALSE 1276.896891 1095.796077 1209.802164 1287.039107 980.7154751 1220.078116 1218.692465 1196.843829 1176.704119 1724.717834 0.740351185 0.635348029 0.701449327 0.746231692 0.568623723 0.707407375 0.706603968 0.69393602 0.682258916 1 10.75214464 GWDS(ph)SHEDDLPVYLAR ddPTM_A459_MK2206_30min_R2 1 GWDSSHEDDLPVYLAR 16 0 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GWDS(0.5)S(0.5)HEDDLPVYLAR 98.572 0.0071474 0 12150 9934.3 8605.9 11756 9735.5 9792.9 12702 10346 8173.5 11604 TRUE FALSE 13080.21334 9440.977108 8892.816411 10795.49719 9353.235353 10165.57567 11034.21214 11698.25772 8884.416256 11225.36243 1.165237508 0.841039848 0.792207509 0.961705892 0.833223463 0.905589974 0.982971571 1.042127396 0.79145919 1 13.45447441 -7.239510502 20.98938843 0.957650137 0.905690378 0.019973751 0.114018636 389.1157915 372443.9607 0.042918818 0.033181366 5.76E-08 7.239510502 -0.051959759 GWEEGVAQMSVGQR ddPTM_A459_MK2206_30min_R1 2 GWEEGVAQMSVGQR 14 0 P62942;Q1JUQ5;Q5W0X3 P62942 FKBP1A;FKBP12-Exip2 Peptidyl-prolyl cis-trans isomerase FKBP1A;Peptidyl-prolyl cis-trans isomerase 0 ; 224.75 2.62E-07 20400400 3603.9 3463.4 3487.6 3112.6 3620.8 3466 3392.8 3797.8 3800.3 2757.1 FALSE TRUE 3297.36938 3237.93203 3250.871429 3352.332991 3476.575869 3662.241925 3166.472503 3764.596235 4195.354785 3098.670363 1.064123961 1.044942395 1.049118186 1.081861766 1.121957311 1.181875287 1.021881043 1.214906974 1.35392097 1 11.59743357 -6.538400673 0.820675257 1.177282359 1.045837764 0.180226471 0.093390545 1.020935603 1.522350259 0.056641261 0.06886686 2.89E-07 6.538400673 -0.131444595 GWLRDPS(ph)ASPGDAGEQAIR ddPTM_A459_MK2206_30min_R2 1 GWLRDPSASPGDAGEQAIR 19 1 P18206;P18206-2 P18206 VCL Vinculin 1 GWLRDPS(0.893)AS(0.107)PGDAGEQAIR 84.948 0.0021477 10434000 7296.8 14783 11341 14859 15329 15239 12891 10856 13602 9581.9 TRUE FALSE 7855.448618 14048.89772 11719.10328 13644.97217 14727.10644 15818.93082 11198.39622 12274.91647 14785.07737 9269.243388 0.847474631 1.515646653 1.264299878 1.472069682 1.588814299 1.706604322 1.208124088 1.324263045 1.595068417 1 13.17823587 -4.755915618 24.99962995 1.424651465 0.847473716 0.406970824 0.202242656 172.4805174 780536.4457 0.048880975 0.41525291 1.75E-05 4.755915618 -0.577177749 GWLRDPSAS(ph)PGDAGEQAIR ddPTM_A459_MK2206_30min_R1 1 GWLRDPSASPGDAGEQAIR 19 1 P18206;P18206-2 P18206 VCL Vinculin 1 GWLRDPS(0.388)AS(0.612)PGDAGEQAIR 185.71 1.11E-14 5181400 1003.7 1149.6 913.24 1048.3 1173.9 908.09 1093.3 955.04 599.44 488.89 TRUE FALSE 918.3300444 1074.760831 851.2518132 1129.040248 1127.141077 959.505271 1020.367952 946.690186 661.7539331 549.4573841 1.671339891 1.956040381 1.549259029 2.05482769 2.051371243 1.746277871 1.857046572 1.722954706 1.204377177 1 9.10186378 -8.303589775 2.330385058 1.000972955 1.8476751 0.793122191 0.150712902 0.123389007 1.248199701 0.140821638 0.040032023 4.97E-09 8.303589775 0.846702145 GWLRDPSAS(ph)PGDAGEQAIR ddPTM_A459_MK2206_30min_R2 1 GWLRDPSASPGDAGEQAIR 19 1 P18206;P18206-2 P18206 VCL Vinculin 1 GWLRDPS(0.286)AS(0.714)PGDAGEQAIR 65.881 0.012802 5492300 15088 20657 17995 22442 25318 25778 26586 10648 26335 16424 TRUE FALSE 16243.14888 19631.20342 18594.94432 20608.41681 24323.88811 26758.99985 23095.22626 12039.73016 28625.5707 15888.08623 1.02234773 1.235592704 1.170370305 1.297098752 1.530951416 1.68421794 1.453619142 0.757783536 1.801700362 1 13.95565774 -5.847994135 3.342610493 1.381240837 1.147792347 0.10768367 0.292391503 0.568160453 12.57112957 0.084893502 0.136854767 1.42E-06 5.847994135 -0.23344849 GWS(ph)QEGPVK ddPTM_A459_MK2206_30min_R2 3 GWSQEGPVK 9 0 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GWS(1)QEGPVK;GWS(1)QEGPVK;GWS(1)QEGPVK 129.82 0.0039921 35112100 128875 215292 171648 170454 154431 154970 191867 149144 191922 142528 TRUE FALSE 138741.7691 204600.9123 177370.6586 156527.3629 148367.263 160867.4919 166674.6324 168637.6329 208615.0286 137877.323 1.006269675 1.48393447 1.286438225 1.135265463 1.076081691 1.166743656 1.208861826 1.223099123 1.513048151 1 17.07302567 -11.81199812 2.196214943 3.06E-05 1.231754447 0.172483078 0.153272363 2774558.879 480885.5406 13776933.67 0.038645312 1.54E-12 11.81199812 1.231723811 GWSQEGPVKS(ph)PAECR ddPTM_A459_MK2206_30min_R1 3 GWSQEGPVKSPAECR 15 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GWSQEGPVKS(1)PAECR;GWS(0.001)QEGPVKS(0.999)PAECR;GWSQEGPVKS(1)PAECR 158.14 0.00070603 51677800 8481.1 9209.7 9103.5 6788.9 7822.6 8151.5 9155 7615.4 8773.3 8717.6 TRUE FALSE 7759.737909 8610.146856 8485.579784 7311.782254 7511.009277 8613.030886 8544.286654 7548.819361 9685.315931 9797.602103 0.792003781 0.878801442 0.866087405 0.746282833 0.766617097 0.879095803 0.872079368 0.770476213 0.988539423 1 13.25821299 -8.274701066 23.85072966 0.994269827 0.824109861 0.670945503 0.048387311 296.9507786 534046.9585 0.047748634 0.012658982 5.31E-09 8.274701066 -0.170159965 GWSQEGPVKS(ph)PAECR ddPTM_A459_MK2206_30min_R2 2 GWSQEGPVKSPAECR 15 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GWSQEGPVKS(1)PAECR;GWS(0.113)QEGPVKS(0.887)PAECR 192.23 0.00010981 59859000 77138 62087 62175 67545 56436 38050 50779 46185 41311 65397 TRUE FALSE 83043.74459 59003.84986 64247.88347 62026.35743 54220.03907 39498.01941 44111.6563 52221.53808 44904.15611 63263.10125 1.312672679 0.932674003 1.015566455 0.980450787 0.857056294 0.624345292 0.697273062 0.825465983 0.709800108 1 15.94907666 -3.038822441 0.500818817 0.765771054 3.985398411 0.61226337 0.118417224 15.36970669 0.730499597 0.06805076 42.38601633 0.000914487 3.038822441 3.219627357 GY(ph)YSPYSVS(ph)GSGSTAGSR ddPTM_A459_MK2206_30min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GY(0.611)Y(0.17)S(0.218)PYS(0.137)VS(0.54)GS(0.304)GS(0.019)TAGSR 141.1 0.007927 9572600 5815.2 4881.3 6272.8 4999.6 5302.5 3463.1 3634.3 2648.9 2082 2236.9 TRUE FALSE 5320.586703 4563.526483 5847.019813 5384.670058 5091.290197 3659.177729 3391.862478 2625.740947 2298.431351 2514.02406 2.116362683 1.815227848 2.325761279 2.141853033 2.025155717 1.455506249 1.349176618 1.044437477 0.914243975 1 11.29578274 -7.080466925 1.293356377 0.984440726 2.112243982 0.920883704 0.141569489 0.118532162 0.398859939 0.084272341 0.056997612 8.31E-08 7.080466925 1.127803256 up GYADS(ph)PSK ddPTM_A459_MK2206_30min_R1 4 GYADSPSK 8 0 Q01518-2;Q01518;Q5T0R7;Q5T0R6;Q5T0R5;Q5T0R4;Q5T0R3;Q5T0R2;Q5T0R1;Q5T0R9;Q5T0R8;Q5T0S3 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein 1 GYADS(0.996)PS(0.004)K;GYADS(1)PSK;GYADS(0.998)PS(0.002)K;GYADS(0.987)PS(0.013)K 164.66 0.00029393 289181800 40452 39344.2 29105.7 27898 17320.9 15776.1 31209.5 32016.3 2618.86 21610 TRUE FALSE 37011.34498 36782.88543 27130.08618 30046.70879 16630.97188 16669.32915 29127.5712 31736.38486 2891.099869 24287.20995 1.523902707 1.514496128 1.117052401 1.23714123 0.684762552 0.686341872 1.199296719 1.306711843 0.119037958 1 14.56790915 -5.564436731 1.249642968 0.867498749 1.569980349 0.394333316 0.321034398 0.601757142 1.716296296 0.108346197 0.379689647 2.73E-06 5.564436731 0.7024816 GYADS(ph)PSK ddPTM_A459_MK2206_30min_R2 5 GYADSPSK 8 0 Q01518-2;Q01518;Q5T0R7;Q5T0R6;Q5T0R5;Q5T0R4;Q5T0R3;Q5T0R2;Q5T0R1;Q5T0R9;Q5T0R8;Q5T0S3 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein 1 GYADS(1)PSK;GYADS(0.971)PS(0.029)K;GYADS(0.972)PS(0.028)K;GYADS(0.997)PS(0.003)K;GYADS(0.98)PS(0.02)K 122.96 0.0061456 590479700 905284 818548 817801 745455 822610 514579 961013 822220 648975 902147 TRUE FALSE 974593.2391 777900.0966 845066.0772 684548.9419 790310.1981 534161.6644 834830.8387 929686.9771 705421.6724 872710.0173 1.1167435 0.891361485 0.968324026 0.784394505 0.905581674 0.612072342 0.956595916 1.065287391 0.808311648 1 19.73514283 GYADSPS(ph)K ddPTM_A459_MK2206_30min_R2 1 GYADSPSK 8 0 Q01518-2;Q01518;Q5T0R7;Q5T0R6;Q5T0R5;Q5T0R4;Q5T0R3;Q5T0R2;Q5T0R1;Q5T0R9;Q5T0R8;Q5T0S3 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein 1 GYADS(0.374)PS(0.626)K 91.265 0.027107 2470000 31767 32751 36137 30392 32495 16465 38195 30488 25940 32270 TRUE FALSE 34199.10594 31124.63296 37341.78954 27908.87638 31219.08303 17091.58711 33179.95062 34472.88628 28196.21431 31217.03254 1.095527126 0.997040091 1.196199206 0.894027206 1.000065685 0.547508386 1.062879714 1.104297349 0.90323173 1 14.93004578 -5.779738726 24.95996885 0.927115867 1.086333967 0.202511812 0.150450773 398.7071688 543827.8763 0.043906569 0.065262326 1.66E-06 5.779738726 0.159218101 GYAFIEYEHER ddPTM_A459_MK2206_30min_R1 1 GYAFIEYEHER 11 0 P08621;P08621-2;M0QYR1;P08621-3 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 0 136.5 0.0019815 11404000 4898.1 4362.4 4783.2 4516.7 5081.7 4913.4 4895.3 4765.5 3827.9 3914.2 FALSE TRUE 4481.490874 4078.406967 4458.529711 4864.577017 4879.285128 5191.592462 4568.743469 4723.835736 4225.823903 4399.120647 1.018724248 0.927095957 1.013504759 1.105806684 1.109150105 1.180143233 1.038558347 1.073813636 0.960606504 1 12.10299945 -5.561391237 5.335418197 1.07479151 0.971863554 0.274998054 0.061180409 0.20736847 14.6095859 0.017079047 0.030925337 2.75E-06 5.561391237 -0.102927956 GYALVPIIVNSST(ph)PK ddPTM_A459_MK2206_30min_R2 2 GYALVPIIVNSSTPK 15 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 GYALVPIIVNS(0.043)S(0.181)T(0.776)PK;GYALVPIIVNS(0.025)S(0.143)T(0.832)PK 154.72 0.00042738 5329500 53510 43502 41328 40862 42284 32880 44318 32984 31271 48707 TRUE FALSE 57606.76674 41341.75394 42705.85489 37523.44389 40623.7177 34131.27144 38498.99336 37295.12205 33990.89505 47117.69458 1.222614291 0.877414617 0.906365544 0.796376907 0.862175411 0.724383307 0.817081432 0.79153113 0.721404036 1 15.52398133 -1.923819927 1.033452378 0.807547892 199.9999359 0.687285426 0.079143595 407.9276497 1.212003429 0.022976043 191596.7251 0.01191736 1.923819927 199.192388 GYDDRDYYSR ddPTM_A459_MK2206_30min_R1 2 GYDDRDYYSR 10 1 P62995;H7C2L4;P62995-3;H7BXF3 P62995 TRA2B Transformer-2 protein homolog beta 0 ; 130.41 0.0078434 337410000 21620 19423.5 21302 18574.2 23909 19665.2 21639 19175.9 14002.4 12121 FALSE TRUE 19781.10547 18159.02662 19856.07959 20004.7881 22956.6539 20778.62663 20195.50179 19008.24713 15457.99959 13622.64099 1.452075665 1.33300339 1.457579305 1.468495582 1.6851838 1.525300905 1.482495341 1.395342294 1.134728545 1 13.7337188 -8.303000959 2.028504458 1.001824152 1.488217567 0.807736832 0.081914587 0.145150663 1.127319953 0.086681073 0.025023042 4.98E-09 8.303000959 0.486393415 GYDDRDYYSR ddPTM_A459_MK2206_30min_R2 2 GYDDRDYYSR 10 1 P62995;H7C2L4;P62995-3;H7BXF3 P62995 TRA2B Transformer-2 protein homolog beta 0 ; 125.97 0.0099642 240980000 383474 529160 409144 484060 523360 513300 501060 362085 440910 405518 FALSE TRUE 412833.0643 502882.6839 422784.6568 444510.7496 502810.2567 532833.9912 435270.2201 409410.7527 479259.5548 392285.9809 1.052377817 1.281928767 1.077746026 1.133129327 1.281744139 1.358279462 1.109573733 1.043653795 1.221709615 1 18.58154625 -10.7149622 5.359391335 0.999991791 1.175484803 0.202425368 0.103149335 1.04E-05 1.57E-06 0.102935034 0.024964245 1.93E-11 10.7149622 0.175493012 GYDRYEDYDYR ddPTM_A459_MK2206_30min_R1 2 GYDRYEDYDYR 11 1 Q13595;Q13595-4;Q13595-3 Q13595 TRA2A Transformer-2 protein homolog alpha 0 ; 149.94 0.0017536 28518000 7921.1 6495.5 8001.7 8086.6 10521.1 8179.8 7696.6 7968.3 3170.4 1837.83 FALSE TRUE 7247.36885 6072.641769 7458.566898 8709.431333 10102.02231 8642.933207 7183.173857 7898.633993 3499.974425 2065.514255 3.508747921 2.940014456 3.610997542 4.216592217 4.890802512 4.184397752 3.477668498 3.824052036 1.694480886 1 11.0122853 -8.345082921 3.024261564 1.015169939 3.858646524 0.8007142 0.500793237 0.119251478 2.008876171 0.543445584 0.148631392 4.52E-09 8.345082921 2.843476584 GYDS(ph)EDDTWEPEQHLVNCEEYIHDFNR ddPTM_A459_MK2206_30min_R1 1 GYDSEDDTWEPEQHLVNCEEYIHDFNR 27 0 Q9Y232-2;Q9Y232 Q9Y232-2 CDYL Chromodomain Y-like protein 1 GYDS(0.998)EDDT(0.002)WEPEQHLVNCEEYIHDFNR 95.867 1.30E-06 2867100 457.59 298.45 518.84 288.26 443.6 412.1 492.44 381 224.76 478.73 TRUE FALSE 418.6695676 279.0208508 483.6225864 310.4618351 425.9304727 435.4327459 459.5902261 377.6689572 248.1246063 538.0386866 0.778140268 0.518588826 0.898862105 0.577025115 0.791635403 0.809296351 0.854195502 0.701936434 0.461164991 1 9.0715661 GYDS(ph)EDDTWEPEQHLVNCEEYIHDFNR ddPTM_A459_MK2206_30min_R2 2 GYDSEDDTWEPEQHLVNCEEYIHDFNR 27 0 Q9Y232-2;Q9Y232 Q9Y232-2 CDYL Chromodomain Y-like protein 1 GY(0.001)DS(0.998)EDDT(0.001)WEPEQHLVNCEEYIHDFNR;GYDS(0.999)EDDT(0.001)WEPEQHLVNCEEYIHDFNR 195.38 7.64E-34 7083100 18610 24014 24366 25279 22582.8 23076 21381 18686.1 16346.6 25793 TRUE FALSE 20034.79591 22821.49968 25178.35028 23213.62484 21696.0858 23954.17335 18573.64902 21128.43743 17768.39772 24951.37652 0.802953532 0.914638904 1.009096643 0.930354476 0.869534624 0.960034142 0.744393761 0.846784441 0.712120941 1 14.60683179 -7.252570609 24.9798364 0.813056821 0.917430073 0.191096579 0.087623929 898.5692598 2530920.578 0.032452982 0.024764386 5.59E-08 7.252570609 0.104373252 GYEEWLLNEIR ddPTM_A459_MK2206_30min_R1 1 GYEEWLLNEIR 11 0 O43707;O43707-2;P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;F6THM6;A0A494C060 O43707;P12814-4 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 0 173.64 0.0024667 6525800 1550.7 1405.4 1236 1115.3 1651 1247.4 1580.6 1136.2 1164.8 1254.3 FALSE TRUE 1418.804822 1313.908205 1152.103764 1201.200599 1585.237174 1318.02671 1475.161058 1126.266323 1285.885128 1409.692153 1.006464297 0.932053286 0.817273304 0.852101359 1.124527203 0.93497485 1.046441987 0.798944876 0.912174424 1 10.46116443 -4.76136039 18.71551522 0.932179219 1.006465556 0.045973187 0.096139811 0.380393016 70606.11619 0.024620838 0.137573127 1.73E-05 4.76136039 0.074286337 GYEEWLLNEIR ddPTM_A459_MK2206_30min_R2 2 GYEEWLLNEIR 11 0 O43707;O43707-2;P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;F6THM6;A0A494C060 O43707;P12814-4 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 0 ; 146.71 0.0094095 4897300 12246.9 13438.5 13720 16233.2 13082.4 12125.1 13753.5 10978 12767.8 13168.1 FALSE TRUE 13184.53208 12771.16363 14177.41795 14906.89563 12568.71924 12586.52918 11947.64893 12412.86229 13878.32017 12738.42598 1.035020505 1.002569992 1.112964661 1.170230581 0.986677574 0.988075701 0.937921918 0.974442393 1.089484697 1 13.6368994 -6.379668833 20.50744436 0.991503599 1.077213706 0.357940429 0.054911558 5.966762233 1013.685627 0.018215145 0.020654021 4.17E-07 6.379668833 0.085710107 GYES(ph)PTLSK ddPTM_A459_MK2206_30min_R2 1 GYESPTLSK 9 0 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 GYES(0.607)PT(0.344)LS(0.05)K 80.979 0.045036 18356000 128990 147900 128300 150740 153130 129390 138500 118880 107770 144380 TRUE FALSE 138865.5736 140555.5011 132577.458 138424.0598 147117.3468 134314.0271 120314.7836 134418.0242 117143.6398 139668.8924 0.994248405 1.006347932 0.949226815 0.991087259 1.053329372 0.961660287 0.861428637 0.962404884 0.838723912 1 17.09165121 -7.005715267 24.81333613 0.912369001 0.997218555 0.391943103 0.048767502 225.0542551 977096.075 0.01653216 0.014132334 9.87E-08 7.005715267 0.084849554 GYES(ph)PTLSKDYEGYPAPAMPDFQPGDTTVR ddPTM_A459_MK2206_30min_R1 1 GYESPTLSKDYEGYPAPAMPDFQPGDTTVR 30 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 GY(0.016)ES(0.448)PT(0.448)LS(0.087)KDY(0.001)EGYPAPAMPDFQPGDTTVR 69.952 0.00014995 6459500 396.68 453.61 631.79 457.31 474.66 341.12 233.63 458.95 240.6 114.49 TRUE FALSE 362.940283 424.0799066 588.9058551 492.5320954 455.7532871 360.4339196 218.044969 454.9374485 265.611231 128.6738856 2.820621149 3.295772912 4.576731732 3.827754896 3.541925272 2.801142734 1.694554944 3.535584914 2.064220178 1 7.007575477 -6.872409759 3.136662549 2.277383627 3.671875658 0.487465936 0.730795275 0.243347877 4.772801476 0.276565744 0.242091936 1.34E-07 6.872409759 1.39449203 GYESPT(ph)LSK ddPTM_A459_MK2206_30min_R2 1 GYESPTLSK 9 0 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 GYES(0.384)PT(0.479)LS(0.137)K 105.4 0.032204 31104000 148050 144770 151450 167180 142640 130540 174390 125850 126690 154450 TRUE FALSE 159384.8218 137580.9323 156499.2674 153520.8592 137039.2369 135507.7912 151492.3835 142299.0271 137709.2672 149410.3091 1.0667592 0.920826234 1.047446246 1.027511824 0.917200678 0.906950745 1.013935279 0.952404342 0.921685177 1 17.18892017 -6.251280656 24.49529076 0.950490951 1.01113593 0.293445296 0.048114608 749.4086634 1807013.866 0.014137697 0.018037946 5.61E-07 6.251280656 0.060644979 GYFDAHALAMDFMS(ph)IGFR ddPTM_A459_MK2206_30min_R1 1 GYFDAHALAMDFMSIGFR 18 0 Q5TF93;Q9UBP5 Q5TF93 HEY2 Hairy/enhancer-of-split related with YRPW motif protein 2 1 GYFDAHALAMDFMS(1)IGFR 70.47 0.030424 6511100 2335.4 2496.7 2238 2185.8 2353.5 1963.9 2356.7 1945.8 2037.9 1908.9 TRUE FALSE 2136.761966 2334.164376 2086.090795 2354.150695 2259.755111 2075.094321 2199.488843 1928.788076 2249.746998 2145.388943 0.995978828 1.08799124 0.972360188 1.097307181 1.053307895 0.967234555 1.025216826 0.899038881 1.048642953 1 11.06702351 -6.757459745 24.98360555 0.984040957 1.043249706 0.213188805 0.050908167 142.7164405 895954.5758 0.016100643 0.015541996 1.75E-07 6.757459745 0.059208749 GYFDEEMNR ddPTM_A459_MK2206_30min_R2 2 GYFDEEMNR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;A0A075B730;P58107;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC;EPPK1 Plectin;Epiplakin 0 ; 154.12 0.012857 9980400 43664 66739 56594 67512 66137 58501 62205 46087 59590 56401 FALSE TRUE 47006.94941 63424.83831 58480.81571 61996.05364 63540.12907 60727.29655 54037.40878 52110.72914 64773.03049 54560.63999 0.861554216 1.162465072 1.071849885 1.136277977 1.164578148 1.113023904 0.990410098 0.955097469 1.18717505 1 15.73557295 -7.250172792 24.53331553 1.029428775 1.093837214 0.056248628 0.099558921 1523.14003 3316689.27 0.037496826 0.028781668 5.62E-08 7.250172792 0.064408439 GYFEYIEENK ddPTM_A459_MK2206_30min_R2 1 GYFEYIEENK 10 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 178.22 0.0012837 2097400 14371 12206 14075 15385 13333 10887 18401 13515 9138.8 13874 FALSE TRUE 15471.25481 11599.86779 14544.25348 14127.99629 12809.47943 11301.31241 15984.9266 15281.4569 9933.676305 13421.29252 1.152739558 0.864288426 1.083670105 1.052655418 0.954414741 0.842043522 1.191012459 1.138598007 0.740143045 1 13.71223599 -4.716619681 23.46736826 0.995714757 1.152743988 0.120294715 0.133215574 13002.52135 6806951.138 0.03272898 16.68065237 1.92E-05 4.716619681 0.157029231 GYFVQPT(ph)VFSNVTDEMR ddPTM_A459_MK2206_30min_R2 1 GYFVQPTVFSNVTDEMR 17 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 GYFVQPT(0.999)VFS(0.001)NVTDEMR 114.06 0.0040972 2081800 12284 13130 12124 13021 10241 15537 13741 15311 12067 14814 TRUE FALSE 13224.47248 12477.98329 12528.20811 11957.14265 9838.886883 16128.27142 11936.79019 17312.20027 13116.56585 14330.62039 0.92281228 0.87072178 0.8742265 0.834377181 0.686563918 1.125441257 0.832956974 1.208056581 0.915282485 1 13.80681345 -6.770983732 24.99999142 1.017889073 0.841412791 0.388566517 0.11196811 211.6318998 554334.5081 0.037494455 0.03348772 1.69E-07 6.770983732 -0.176476282 GYFVQPTVFS(ph)NVTDEMR ddPTM_A459_MK2206_30min_R2 2 GYFVQPTVFSNVTDEMR 17 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 GYFVQPT(0.03)VFS(0.878)NVT(0.092)DEMR;GYFVQPT(0.021)VFS(0.949)NVT(0.03)DEMR 116.04 0.001928 1782400 12394 17656.6 12070.6 17935.6 11900.8 11487.6 17988.7 15474.4 13087 14646.6 TRUE FALSE 13342.89417 16779.79892 12473.02778 16470.20411 11433.5148 11924.76867 15626.76208 17496.95721 14225.2836 14168.68264 0.941717343 1.184287865 0.880323746 1.162437223 0.806956799 0.841628609 1.10290861 1.234903601 1.003994794 1 13.79041801 -7.45491076 24.96198984 1.105451368 0.976274753 0.149119983 0.131642012 304.9078356 111980.2652 0.055213901 0.037225171 3.51E-08 7.45491076 -0.129176616 GYFVQPTVFSNVTDEMR ddPTM_A459_MK2206_30min_R1 2 GYFVQPTVFSNVTDEMR 17 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 264.58 1.42E-39 84249000 12672.7 14691.6 15072 15106.2 14891.4 13125.6 14767.9 13650.2 9193.4 11648.3 FALSE TRUE 11594.82032 13735.17417 14048.95463 16269.68214 14298.244 13868.76013 13782.76034 13530.85774 10149.08683 13091.37934 0.885683625 1.049177005 1.073145485 1.242778298 1.092187739 1.059381121 1.052811929 1.03357006 0.775249617 1 13.67632949 -8.089026125 6.461609377 0.888817624 1.070491523 0.349941558 0.095146725 0.264796858 15.86809237 0.066589689 0.024804351 8.15E-09 8.089026125 0.181673898 GYFVQPTVFSNVTDEMR ddPTM_A459_MK2206_30min_R2 2 GYFVQPTVFSNVTDEMR 17 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 227.91 4.14E-15 20593000 35131 45528 40499 43253 50221 46456 45659 36127 40367 34889 FALSE TRUE 37820.65637 43267.14572 41849.21645 39719.09154 48249.0712 48223.91563 39663.91845 40848.92294 43878.04869 33750.57479 1.120592956 1.28196767 1.239955666 1.176841929 1.429577763 1.428832425 1.175207199 1.210317845 1.300068191 1 15.04262445 -11.81295042 0.745811693 0.562130858 1.266080028 0.392318643 0.097911728 688.051793 60.34756104 499.8300034 0.035892989 1.54E-12 11.81295042 0.70394917 GYGFVHFETQEAAER ddPTM_A459_MK2206_30min_R1 2 GYGFVHFETQEAAER 15 0 P11940;E7ERJ7;P11940-2;A0A087WTT1;E7EQV3;H0YAR2;H0YBN4;E5RGH3 P11940 PABPC1 Polyadenylate-binding protein 1;Polyadenylate-binding protein 0 ; 100.4 0.010699 9936100 5906.7 6500.8 6394.8 5682.6 5165.5 5169.4 5952.7 5757.3 5819.9 6325 FALSE TRUE 5404.304148 6077.596738 5960.738793 6120.274837 4959.747197 5462.086961 5555.606244 5706.964533 6424.899432 7108.588751 0.760249937 0.854965303 0.838526324 0.860969041 0.697711933 0.768378528 0.781534344 0.802826656 0.903822074 1 12.79534746 -8.482564815 2.352155698 0.999096333 0.795739154 0.669745036 0.046388405 0.178743572 2.221799637 0.047760334 0.013110407 3.29E-09 8.482564815 -0.203357179 GYGFVHFETQEAAER ddPTM_A459_MK2206_30min_R2 2 GYGFVHFETQEAAER 15 0 P11940;E7ERJ7;P11940-2;A0A087WTT1;E7EQV3;H0YAR2;H0YBN4;E5RGH3 P11940 PABPC1 Polyadenylate-binding protein 1;Polyadenylate-binding protein 0 ; 122.78 0.0021334 7198300 31046 35529 35469 40949 38600 43104 42278 34681 35793 35970 FALSE TRUE 33422.90563 33764.68152 36651.51876 37603.33571 37084.37005 44744.35292 36726.84782 39213.92578 38906.21044 34796.30185 0.960530397 0.970352587 1.053316497 1.080670465 1.065756074 1.285893918 1.055481355 1.126956708 1.118113373 1 15.08664636 -5.480066438 1.321251066 1.11939313 0.948691021 0.381439262 0.070158021 0.529181402 1.638076877 0.022263094 0.086175059 3.31E-06 5.480066438 -0.170702109 GYLDDPTVPR ddPTM_A459_MK2206_30min_R2 2 GYLDDPTVPR 10 0 P11413-3;P11413;P11413-2;E7EUI8 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 160.11 0.0062 19321900 187799 224388 210942 260370 194231 243320 223240 195306 214920 230490 FALSE TRUE 202177.0358 213245.2182 217974.701 239096.9381 186604.515 252579.7131 193928.3198 220833.1648 233613.3531 222969.1302 0.906749 0.956388977 0.977600356 1.072332022 0.8369074 1.132801267 0.869754121 0.990420354 1.04773855 1 17.76648446 -4.88429442 2.223665253 0.988553508 0.896018404 0.090578194 0.082873366 1.271364654 8.853904747 0.020704009 0.21682434 1.31E-05 4.88429442 -0.092535104 GYLPSHYER ddPTM_A459_MK2206_30min_R2 1 GYLPSHYER 9 0 Q6P2Q9;I3L1T8 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 0 98.582 0.027498 2733300 9856.5 8850.1 9500.2 11023 11044 11291 12786 7886.4 10039 9639.2 FALSE TRUE 10611.12122 8410.616903 9816.931926 10122.38564 10610.35707 11720.68692 11107.18284 8917.179558 10912.17407 9324.673693 1.137961667 0.901974394 1.052790934 1.085548511 1.137879718 1.256954109 1.191160485 0.956299368 1.170247285 1 13.18683753 -5.803455291 2.724576854 1.125738541 1.013638115 0.132811727 0.098492612 0.46231769 6.98976342 0.029360435 0.050790257 1.57E-06 5.803455291 -0.112100426 GYNHGQGSYSYSNSYNS(ph)PGGGGGSDYNYESK ddPTM_A459_MK2206_30min_R1 1 GYNHGQGSYSYSNSYNSPGGGGGSDYNYESK 31 0 Q12906-7;Q12906 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 GYNHGQGSYSYSNS(0.001)Y(0.006)NS(0.993)PGGGGGSDYNYESK 177.8 7.35E-34 17812000 766.55 485.7 454.76 188.35 594.27 617.18 753.36 553.77 307.3 349.03 TRUE FALSE 701.3508972 454.0808417 423.8921582 202.8567496 570.5989675 652.1241982 703.104729 548.9284473 339.2449347 392.2704714 1.787926822 1.157570796 1.080611948 0.517134896 1.454605965 1.662435094 1.792397797 1.399362142 0.864824042 1 8.615704929 GYNHGQGSYSYSNSYNS(ph)PGGGGGSDYNYESK ddPTM_A459_MK2206_30min_R2 2 GYNHGQGSYSYSNSYNSPGGGGGSDYNYESK 31 0 Q12906-7;Q12906 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 GYNHGQGSYSYSNSY(0.001)NS(0.999)PGGGGGSDYNYESK;GYNHGQGSYSYSNS(0.004)Y(0.012)NS(0.984)PGGGGGSDYNYESK 182.21 3.15E-34 46240000 109397 183659 143453 219970 194064 228940 227520 159811 154692 159116 TRUE FALSE 117772.5184 174538.7611 148235.6514 201997.7474 186444.0723 237652.4721 197646.3507 180698.8464 168146.8305 153924.058 0.765133924 1.133927753 0.963044071 1.312320829 1.211273109 1.543959244 1.284051066 1.173948042 1.092401232 1 17.23185921 -4.241377935 0.877615827 1.244067297 8.60E-08 0.40994443 0.15609914 5.039270009 1.561033676 0.055101836 7.552848695 5.74E-05 4.241377935 -1.244067211 GYPHWPAR ddPTM_A459_MK2206_30min_R1 2 GYPHWPAR 8 0 O75475-3;O75475-2;O75475;H3BPQ6;M0R0J3;P51858;Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;Q9Y3E1 O75475-3;P51858;Q7Z4V5-2;Q9Y3E1 PSIP1;HDGFRP3;HDGFRP2;HDGF PC4 and SFRS1-interacting protein;Hepatoma-derived growth factor;Hepatoma-derived growth factor-related protein 2;Hepatoma-derived growth factor-related protein 3 0 ; 138.37 0.0034738 26033000 26674.8 28602 27810.5 24473.6 27654.7 26956.2 29805 23762.1 25037.7 24753.2 FALSE TRUE 24405.96819 26740.0046 25922.80074 26358.56091 26553.15474 28482.43675 27816.76283 23554.35046 27640.45851 27819.81329 0.877287275 0.961185624 0.931810738 0.9474744 0.954469193 1.023818401 0.999890349 0.846675361 0.993552984 1 14.76382512 -3.689945502 1.247475895 0.961212256 7.43E-15 0.218990126 0.047302976 32.52195148 5.061463735 0.014137568 74.24443444 0.000204199 3.689945502 -0.961212256 GYPHWPAR ddPTM_A459_MK2206_30min_R2 1 GYPHWPAR 8 0 O75475-3;O75475-2;O75475;H3BPQ6;M0R0J3;P51858;Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;Q9Y3E1 O75475-3;P51858;Q7Z4V5-2;Q9Y3E1 PSIP1;HDGFRP3;HDGFRP2;HDGF PC4 and SFRS1-interacting protein;Hepatoma-derived growth factor;Hepatoma-derived growth factor-related protein 2;Hepatoma-derived growth factor-related protein 3 0 107.32 0.018761 8773900 96472 108110 96161 108740 99454 108710 105800 89913 90793 102110 FALSE TRUE 103857.9705 102741.4146 99366.95975 99855.59416 95548.93624 112847.0352 91908.33291 101664.9378 98690.01102 98778.15906 1.051426464 1.040122792 1.005960839 1.010907625 0.967308332 1.142429018 0.930451972 1.029224869 0.999107616 1 16.59190446 -5.134734329 3.961906028 1.012047511 1.049187569 0.070614209 0.05130762 0.6651497 17.58452902 0.012709822 0.039535372 7.33E-06 5.134734329 0.037140058 GYS(ph)DRDGYGR ddPTM_A459_MK2206_30min_R1 1 GYSDRDGYGR 10 1 H3BT71;H0Y6E7;P38159;P38159-2;H3BUY5 H3BT71;P38159 RBMX "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed" 1 GYS(1)DRDGYGR 116.74 0.029632 7940500 6244.9 6861.5 6324.8 6114.6 7607.2 6192.1 7076.3 5955.9 5635.8 4745.9 TRUE FALSE 5713.738462 6414.815103 5895.490198 6585.547551 7304.189115 6542.691351 6604.252938 5903.828194 6221.661578 5333.857922 1.071220596 1.202659538 1.105295695 1.234668723 1.369400764 1.226633976 1.238175639 1.106858915 1.166446814 1 12.38096368 -8.709555393 1.073709655 1.002812077 1.207117465 0.34925883 0.080532283 0.908381119 2.099766038 0.082024974 0.026159806 1.95E-09 8.709555393 0.204305388 GYS(ph)FTTTAER ddPTM_A459_MK2206_30min_R1 4 GYSFTTTAER 10 0 P60709;A0A2R8Y793;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 GYS(0.332)FT(0.332)T(0.332)T(0.004)AER;GYS(0.389)FT(0.275)T(0.275)T(0.061)AER;GYS(0.498)FT(0.498)T(0.003)TAER;GYS(0.565)FT(0.089)T(0.291)T(0.054)AER 179.57 6.20E-05 119452000 6823.8 7885.5 8176.6 6315.7 8152 7715.6 10411.8 6998.8 6349.6 5627.77 TRUE FALSE 6243.399977 7372.152517 7621.595173 6802.136308 7827.288578 8152.450604 9717.247819 6937.610229 7009.663642 6324.980635 0.987101833 1.165561279 1.204998974 1.075439863 1.23751977 1.288928943 1.53632847 1.09685873 1.108250609 1 12.62684535 -3.804926047 0.917905421 1.218818517 7.56E-16 0.143854588 0.141722188 20.28490488 3.506706813 0.049078679 37.69996658 0.000156702 3.804926047 -1.218818517 GYS(ph)FTTTAER ddPTM_A459_MK2206_30min_R2 2 GYSFTTTAER 10 0 P60709;A0A2R8Y793;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 GYS(0.933)FT(0.065)T(0.002)TAER;GYS(0.757)FT(0.242)T(0.001)TAER 167.12 0.00030569 53350000 62184 81139 76133 82249 69508 70674 99532 62797 52861 73989 TRUE FALSE 66944.85485 77109.75525 78671.23622 75528.9936 66778.76667 73363.54859 86463.32884 71004.78351 57458.75423 71574.74499 0.935313914 1.077331889 1.099147978 1.055246423 0.932993428 1.024992106 1.208014487 0.992036835 0.802779727 1 16.127163 -8.008141466 24.99555956 0.90006264 1.049602992 0.309770946 0.086640965 418.0962394 1283613.582 0.050695159 0.022523783 9.81E-09 8.008141466 0.149540352 GYSFTT(ph)TAER ddPTM_A459_MK2206_30min_R1 2 GYSFTTTAER 10 0 P60709;A0A2R8Y793;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 GYSFT(0.018)T(0.762)T(0.22)AER;GYS(0.004)FT(0.025)T(0.946)T(0.025)AER 152.69 0.0014592 30711200 7823.1 8842 8730.9 6753.5 9230.7 8795.6 10007.5 7048.6 6483.9 6137.1 TRUE FALSE 7157.704264 8266.384193 8138.270834 7273.65574 8863.021673 9293.599271 9339.917935 6986.974833 7157.924608 6897.410281 1.03773793 1.198476509 1.179902384 1.054548801 1.284978175 1.347404155 1.354119525 1.012985244 1.037769875 1 12.75183907 -7.793835232 24.96382275 1.019032853 1.209108179 0.432198949 0.100440342 208.8437082 160929.5087 0.059979576 0.028816652 1.61E-08 7.793835232 0.190075326 GYSFTT(ph)TAER ddPTM_A459_MK2206_30min_R2 1 GYSFTTTAER 10 0 P60709;A0A2R8Y793;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 GYS(0.011)FT(0.019)T(0.967)T(0.003)AER 97.813 0.047308 15019000 49837 56922 49859 54050 45117 51679 52222 48919 50147 48491 TRUE FALSE 53652.55904 54095.33625 51521.27418 49633.9421 43345.47989 53645.68056 45365.18867 55312.88126 54508.69541 46908.74264 1.143764595 1.153203714 1.098329891 1.058095769 0.924038408 1.14361796 0.967094535 1.179159324 1.1620157 1 15.51756921 -5.458554649 3.197929078 1.063569034 1.14818123 0.159111393 0.079007169 0.488310055 9.71082775 0.022168585 0.050053049 3.48E-06 5.458554649 0.084612196 GYSFTTTAER ddPTM_A459_MK2206_30min_R1 2 GYSFTTTAER 10 0 P60709;A0A2R8Y793;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 0 ; 138.06 0.023241 315690000 9634.5 9737 10066.4 8828.8 9850.7 8825.2 9496.7 9442.3 9043 8510.8 FALSE TRUE 8815.035182 9103.11953 9383.120815 9508.795706 9458.32576 9324.875197 8863.192471 9359.746967 9983.052211 9565.182157 0.921575255 0.951693275 0.980966244 0.994105031 0.988828608 0.974876907 0.926609899 0.978522605 1.043686576 1 13.22357673 -4.978617689 2.167495407 0.98326875 0.917080489 0.366384414 0.027197464 0.530642877 3.890742066 0.007745522 0.058717692 1.05E-05 4.978617689 -0.066188262 GYSFTTTAER ddPTM_A459_MK2206_30min_R2 4 GYSFTTTAER 10 0 P60709;A0A2R8Y793;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 0 ;;; 209.6 0.00084964 501790000 183668 208797 178060 213385 202499 201259 204415 160353 184938 187414 FALSE TRUE 197729.7633 198428.4446 183996.4315 195950.7629 194547.8718 208918.0523 177575.065 181311.6877 201023.5729 181298.6965 1.090629812 1.09448357 1.014880057 1.080817274 1.073079264 1.152341723 0.979461344 1.000071656 1.108797674 1 17.46800903 -14.52287874 0.087430078 0.783903591 1.120938845 0.151604454 0.049900878 443.1879239 2.695824526 17.83456527 1.337335989 3.00E-15 14.52287874 0.337035254 GYT(ph)SDDDTWEPEIHLEDCK ddPTM_A459_MK2206_30min_R1 1 GYTSDDDTWEPEIHLEDCK 19 0 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GYT(0.464)S(0.464)DDDT(0.072)WEPEIHLEDCK 167.16 8.18E-09 13926000 4888.8 5488.2 4817 4489.7 4579.1 4458.4 5138.6 4426.6 5249.5 5550.1 TRUE FALSE 4472.981888 5130.917182 4490.035461 4835.497472 4396.704751 4710.830755 4795.81337 4387.898703 5795.204311 6237.688289 0.717089678 0.822567103 0.719823635 0.775206655 0.704861248 0.75522061 0.768844666 0.703449499 0.929062826 1 12.60679574 -8.401963812 4.015158624 0.996874773 0.748547254 0.857472791 0.036083797 0.070036584 1.809299466 0.032643352 0.008595792 3.96E-09 8.401963812 -0.248327519 GYT(ph)SDDDTWEPEIHLEDCK ddPTM_A459_MK2206_30min_R2 1 GYTSDDDTWEPEIHLEDCK 19 0 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GYT(0.495)S(0.495)DDDT(0.01)WEPEIHLEDCK 139.7 0.00017466 5088000 35348 36741 36878 35552 29979 28363 38940 32230 21535 29182 TRUE FALSE 38054.27006 34916.49537 38107.49411 32647.28787 28801.87383 29442.37384 33827.13122 36442.57166 23408.07537 28229.79373 1.348017999 1.236866826 1.349903385 1.156483401 1.020265118 1.042953913 1.198277662 1.290925892 0.829197535 1 14.78493097 -1.522878746 0.209780369 0.998157335 2.807634265 0.428219274 0.122531342 56.30201212 0.700421635 0.215666352 33.97715807 0.03 1.522878746 1.80947693 GYT(ph)SDSEVYTDHGR ddPTM_A459_MK2206_30min_R2 1 GYTSDSEVYTDHGR 14 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GYT(0.606)S(0.393)DS(0.001)EVYTDHGR 151.49 0.00054331 6519000 40157 28332 28265 40142 25817 33859 33842 21887 30919 30819 TRUE FALSE 43231.4508 26925.07408 29207.34099 36862.27019 24803.29486 35147.52797 29398.50475 24747.70605 33608.27873 29813.37855 1.450068825 0.903120525 0.979672295 1.236433842 0.83195183 1.178917978 0.986084308 0.830087271 1.127288498 1 14.86367226 -4.753005201 24.98226715 1.008244284 1.450069656 0.507402294 0.130620411 255.1859696 755809.5359 0.031025946 0.348078475 1.77E-05 4.753005201 0.441825372 GYT(ph)SDSEVYTDHGRPGK ddPTM_A459_MK2206_30min_R1 1 GYTSDSEVYTDHGRPGK 17 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GYT(0.575)S(0.422)DS(0.003)EVYTDHGRPGK 116.87 0.0022223 29655000 3307.3 3404.3 3372.6 2858.8 3797.2 3269.3 3697.4 3423.8 2788.4 3035.6 TRUE FALSE 3025.996768 3182.679451 3143.677309 3078.985271 3645.949483 3454.404941 3450.753192 3393.866078 3078.264158 3411.673046 0.886953916 0.932879385 0.921447415 0.902485446 1.068669077 1.012525202 1.011454833 0.994780576 0.90227408 1 11.73626368 -6.232560271 24.89174811 0.999393603 0.913258934 0.535899256 0.039788053 567.4307629 489084.939 0.01210007 0.015618579 5.85E-07 6.232560271 -0.086134668 GYT(ph)SDSEVYTDHGRPGK ddPTM_A459_MK2206_30min_R2 3 GYTSDSEVYTDHGRPGK 17 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GYT(0.859)S(0.14)DS(0.001)EVYTDHGRPGK;GYT(0.5)S(0.5)DSEVYTDHGRPGK;GYT(0.837)S(0.151)DS(0.011)EVYTDHGRPGK 113.81 0.0014184 327402000 246132 288875 250358 287494 298119 266592 293738 232623 228043 270327 TRUE FALSE 264976.0552 274529.8876 258704.8108 264004.8206 286413.3501 276737.3454 255169.8478 263027.6248 247877.7679 261506.2521 1.013268528 1.049802386 0.989287287 1.009554527 1.095244752 1.058243706 0.975769587 1.00581773 0.947884672 1 17.99648591 -7.271893104 24.56749554 0.982852804 1.035913296 0.415150692 0.031125051 631.1657591 1483305.835 0.013707686 0.009348727 5.35E-08 7.271893104 0.053060492 GYTS(ph)DDDTWEPEIHLEDCK ddPTM_A459_MK2206_30min_R1 3 GYTSDDDTWEPEIHLEDCK 19 0 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GYT(0.13)S(0.869)DDDT(0.001)WEPEIHLEDCK;GYT(0.15)S(0.846)DDDT(0.004)WEPEIHLEDCK;GY(0.013)T(0.132)S(0.812)DDDT(0.042)WEPEIHLEDCK 181.54 2.52E-13 22634900 7560.4 8652.3 7717.3 6570.8 6963.9 6956 7520.7 6859.7 7639.8 8345.4 TRUE FALSE 6917.348279 8089.033697 7193.471178 7076.884155 6686.513117 7349.842709 7019.007825 6799.726366 8433.984549 9379.291157 0.737512906 0.862435504 0.76695254 0.754522281 0.712901754 0.783624539 0.74835163 0.724972309 0.899213428 1 13.19526318 -8.477881155 3.606868792 0.998917656 0.763882009 0.796926737 0.039529944 0.088360208 2.533461726 0.039337553 0.010378187 3.33E-09 8.477881155 -0.235035647 GYTS(ph)DDDTWEPEIHLEDCK ddPTM_A459_MK2206_30min_R2 3 GYTSDDDTWEPEIHLEDCK 19 0 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GYT(0.288)S(0.704)DDDT(0.008)WEPEIHLEDCK;GYT(0.14)S(0.86)DDDTWEPEIHLEDCK;GYT(0.155)S(0.839)DDDT(0.006)WEPEIHLEDCK 172.83 1.25E-09 16085800 170436 176310 163947 169200 141768 139799 193600 149265 136105 179937 TRUE FALSE 183484.7112 167554.7018 169412.9112 155375.8188 136201.476 145119.1489 168180.0874 168774.448 147943.1669 174065.6704 1.054111996 0.962594757 0.973270092 0.892627583 0.782471786 0.833703444 0.966187572 0.969602148 0.849927309 1 17.40927217 -5.160262869 1.439707777 0.895551999 1.051725578 0.326732572 0.066121726 0.804445611 2.426768978 0.021177998 0.147796933 6.91E-06 5.160262869 0.156173579 GYTS(ph)DSEVYTDHGR ddPTM_A459_MK2206_30min_R2 1 GYTSDSEVYTDHGR 14 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GYT(0.107)S(0.874)DS(0.019)EVYTDHGR 134.81 0.00040652 8178800 23679 23336 17656 24041 22622 28290 28586 18039 19480 21060 TRUE FALSE 25491.88245 22177.16817 18244.64223 22076.7734 21733.74661 29366.59577 24832.62386 20396.75924 21174.33519 20372.81392 1.251269586 1.088566766 0.895538647 1.083638887 1.06680141 1.441459971 1.218909865 1.001175356 1.039342688 1 14.31435764 -7.780079189 24.72165887 1.01519418 1.142867737 0.175306852 0.134579221 476.2927176 631688.591 0.081494529 0.039262606 1.66E-08 7.780079189 0.127673557 GYTS(ph)DSEVYTDHGRPGK ddPTM_A459_MK2206_30min_R1 1 GYTSDSEVYTDHGRPGK 17 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GYT(0.035)S(0.964)DSEVYTDHGRPGK 107.72 0.0013284 32141000 3315.1 2596.4 3326.1 2766.6 3388.3 2546.9 2738 3005.5 2569.8 2535.8 TRUE FALSE 3033.133337 2427.373888 3100.333599 2979.684011 3253.336836 2691.103277 2555.353016 2979.22323 2836.939906 2849.954048 1.064274471 0.851723869 1.08785389 1.045520019 1.141540102 0.944261989 0.89662955 1.045358339 0.995433561 1 11.47672294 -9.761094607 14.82686074 0.999999634 1.006784563 0.000614074 0.084404156 0 0 0.082948958 0.020118077 1.73E-10 9.761094607 0.006784929 GYTS(ph)DSEVYTDHGRPGK ddPTM_A459_MK2206_30min_R2 3 GYTSDSEVYTDHGRPGK 17 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GYT(0.049)S(0.889)DS(0.013)EVYT(0.049)DHGRPGK;GYT(0.205)S(0.795)DS(0.001)EVYTDHGRPGK;GYT(0.077)S(0.922)DSEVYTDHGRPGK 113.23 0.0010113 324342000 76401 103544 82324 103797 96919 99363 110850 73705.8 84537.8 95574 TRUE FALSE 82250.3193 98402.15553 85068.64107 95316.45307 93113.47308 103144.3286 96295.26185 83339.40113 91890.74503 92455.42821 0.889621312 1.064319937 0.920104343 1.03094491 1.007117428 1.115611388 1.041531727 0.901400845 0.993892374 1 16.4964704 -3.734750627 12.95096176 0.999296205 0.751916587 0 0.06965421 0 120555371.9 0.016347011 0 0.000184183 3.734750627 -0.247379618 GYTSDDDT(ph)WEPEIHLEDCK ddPTM_A459_MK2206_30min_R2 2 GYTSDDDTWEPEIHLEDCK 19 0 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GY(0.002)T(0.162)S(0.162)DDDT(0.675)WEPEIHLEDCK;GYT(0.265)S(0.265)DDDT(0.471)WEPEIHLEDCK 113.17 0.0017528 0 23441 27775 22453 25472 20540.9 20036.4 26708 20522.3 18391.8 23934.7 TRUE FALSE 25235.66098 26395.73389 23201.57181 23390.85612 19734.36106 20798.89924 23201.20752 23204.63507 19991.48552 23153.7127 1.08991855 1.140021656 1.002067017 1.010242134 0.85231951 0.898296507 1.002051283 1.002199318 0.863424617 1 14.49895593 -5.547305114 1.892552432 0.940169313 1.117012134 0.576441172 0.056986447 0.254103936 1.784739039 0.017362927 0.045339834 2.84E-06 5.547305114 0.176842822 GYVLGETSNLPS(ph)PGK ddPTM_A459_MK2206_30min_R1 1 GYVLGETSNLPSPGK 15 0 B1AKT1;Q9H040 B1AKT1 SPRTN SprT-like domain-containing protein Spartan 1 GYVLGETSNLPS(1)PGK 173.19 3.40E-05 12394000 5023.8 5545 5707.5 4427.1 3442.9 3615.6 4163.1 3276.2 4822.6 4973.4 TRUE FALSE 4596.499429 5184.019492 5320.090802 4768.076009 3305.762003 3820.312147 3885.387195 3247.556529 5323.926528 5589.542339 0.822339138 0.927449723 0.951793632 0.853035136 0.591419083 0.683474946 0.695117231 0.581005802 0.952479864 1 12.44851445 -6.021147862 19.53764428 0.723388005 0.903085761 0.194029963 0.13362789 58.10916006 53685.95569 0.037443919 0.049167593 9.52E-07 6.021147862 0.179697756 GYVLGETSNLPS(ph)PGK ddPTM_A459_MK2206_30min_R2 4 GYVLGETSNLPSPGK 15 0 B1AKT1;Q9H040 B1AKT1 SPRTN SprT-like domain-containing protein Spartan 1 GYVLGETS(0.002)NLPS(0.997)PGK;GYVLGET(0.013)S(0.013)NLPS(0.973)PGK;GYVLGET(0.011)S(0.005)NLPS(0.983)PGK;GYVLGET(0.415)S(0.04)NLPS(0.546)PGK 166.3 8.05E-05 11790800 111576 111191 109279 92920 111434 78664 124277 90800 81021 117815 TRUE FALSE 120118.3443 105669.4166 112922.3073 85328.13876 107058.5412 81657.61364 107959.2806 102667.8718 88068.06013 113970.7062 1.053940511 0.927162954 0.990801155 0.74868483 0.93935139 0.716478965 0.947254643 0.900826846 0.772725405 1 16.79830353 -5.72260289 24.99923095 0.857494879 0.984287911 0.295429064 0.091657427 198.1316094 127536.8124 0.023307313 0.040368534 1.89E-06 5.72260289 0.126793033 GYYS(ph)PGIVSTR ddPTM_A459_MK2206_30min_R1 2 GYYSPGIVSTR 11 0 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 GYYS(0.989)PGIVS(0.011)TR;GYYS(0.997)PGIVS(0.002)TR 131.17 0.0022535 28153000 6781 6769.8 6757.9 5506.1 6889.6 6341.8 7543.1 6103.5 6178.8 5252.2 TRUE FALSE 6204.240342 6329.08479 6299.192577 5930.180776 6615.172643 6700.867236 7039.913562 6050.137743 6821.108371 5902.882188 1.051052714 1.072202458 1.067138455 1.00462462 1.120668249 1.135185664 1.192623084 1.024946382 1.155555567 1 12.52720383 -6.2880186 24.66487601 1.111984605 1.05174254 0.183718955 0.056574827 984.5660016 913651.1988 0.016926331 0.019200548 5.15E-07 6.2880186 -0.060242065 GYYS(ph)PYSVS(ph)GSGSTAGSR ddPTM_A459_MK2206_30min_R2 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GYY(0.003)S(0.861)PY(0.002)S(0.136)VS(0.492)GS(0.181)GS(0.289)T(0.037)AGSR;GYYS(0.863)PY(0.005)S(0.133)VS(0.912)GS(0.053)GS(0.029)T(0.004)AGSR 120.99 0.017129 39082800 184967 184667 159386 206693 195742 173205 152186 111856 128860 112828 TRUE FALSE 199128.2157 175496.7053 164699.8497 189805.5207 188056.1856 179796.4376 132203.7954 126475.9633 140068.0099 109146.4316 1.824413431 1.607901447 1.508980617 1.738998865 1.72297145 1.64729561 1.21125165 1.158773232 1.283303612 1 16.73590544 -7.270525652 4.420376537 1.169698665 1.672431455 0.859745126 0.101428323 0.075739265 3.873418911 0.042842527 0.029987177 5.36E-08 7.270525652 0.50273279 GYYS(ph)PYSVSGS(ph)GSTAGSR ddPTM_A459_MK2206_30min_R2 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GYY(0.017)S(0.983)PYS(0.005)VS(0.182)GS(0.561)GS(0.248)T(0.004)AGSR 166.36 2.69E-06 17617000 55305 54743 51477 59361 52888 44564 41513 25778 33104 29897 TRUE FALSE 59539.19332 52024.54222 53193.21749 54511.01641 50811.35138 46259.91425 36062.29323 29147.27311 35983.32608 28921.46334 2.058650789 1.798821229 1.839229809 1.884794548 1.756873461 1.599501163 1.24690417 1.007807688 1.24417377 1 14.81985293 -7.13081187 1.427511458 1.074257215 1.884222154 0.936195606 0.092571796 0.092975205 0.376505626 0.049865393 0.032827727 7.40E-08 7.13081187 0.809964939 GYYS(ph)PYSVSGSGS(ph)TAGSR ddPTM_A459_MK2206_30min_R1 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GY(0.002)Y(0.001)S(0.997)PYS(0.001)VS(0.022)GS(0.124)GS(0.762)T(0.088)AGS(0.002)R;GY(0.448)Y(0.019)S(0.533)PYS(0.032)VS(0.033)GS(0.035)GS(0.805)T(0.094)AGSR 154.31 0.00086784 29838300 8398.5 7851.9 7941.8 6324.9 7624.8 5741.9 5642.1 4379.6 3935.7 3446.5 TRUE FALSE 7684.163473 7340.739883 7402.732743 6812.044894 7321.08807 6067.001416 5265.725804 4341.309619 4344.830099 3873.47844 1.983788884 1.895128628 1.91113307 1.758637617 1.890055201 1.566292806 1.359430777 1.120778052 1.12168692 1 11.91941399 -7.26938793 1.001425059 1.025439107 1.915616971 0.972036227 0.060351156 0.078679639 0.153107732 0.04297732 0.024345912 5.38E-08 7.26938793 0.890177864 GYYS(ph)PYSVSGSGS(ph)TAGSR ddPTM_A459_MK2206_30min_R2 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GY(0.001)Y(0.041)S(0.949)PY(0.001)S(0.008)VS(0.004)GS(0.028)GS(0.863)T(0.102)AGS(0.003)R;GY(0.05)Y(0.097)S(0.967)PY(0.001)S(0.077)VS(0.001)GS(0.006)GS(0.51)T(0.124)AGS(0.167)R 129.42 0.011491 43799000 168718 184130 172222 202812 171053 187772 154747 115123 124440 136223 TRUE FALSE 181635.1798 174986.372 177963.7955 186241.6108 164336.5997 194917.795 134428.533 130169.9714 135263.5663 131778.0547 1.378341639 1.327887048 1.350481277 1.413297619 1.247071071 1.479136989 1.0201132 0.987797033 1.026449864 1 17.00775061 -7.275039105 24.97993449 1.007573068 1.36033563 0.904957753 0.056730827 209.7004457 385175.6324 0.021982236 0.014908739 5.31E-08 7.275039105 0.352762562 GYYS(ph)PYSVSGSGSTAGSR ddPTM_A459_MK2206_30min_R1 3 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYS(0.841)PYS(0.159)VSGSGSTAGSR;GYYS(0.998)PYS(0.002)VSGSGSTAGSR;GYYS(0.653)PYS(0.347)VSGSGSTAGSR 280.69 5.19E-67 414854000 14607.7 11893.5 12942.6 10808.1 13083.3 9414.7 10339.8 8181.5 7322.5 6761.6 TRUE FALSE 13365.23841 11119.23099 12064.09237 11640.54173 12562.16446 9947.752178 9650.050808 8109.970008 8083.700079 7599.278055 1.758751069 1.463195702 1.587531379 1.531795738 1.653073406 1.309039109 1.269864155 1.067202693 1.063745795 1 12.89164665 -7.271887337 1.128995532 1.021372115 1.596397958 0.882650177 0.087307403 0.155219751 0.384261727 0.057701097 0.032525622 5.35E-08 7.271887337 0.575025843 GYYS(ph)PYSVSGSGSTAGSR ddPTM_A459_MK2206_30min_R2 4 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYY(0.002)S(0.823)PYS(0.174)VSGSGSTAGSR;GYYS(0.98)PYS(0.02)VSGSGSTAGSR;GYY(0.014)S(0.356)PY(0.004)S(0.356)VS(0.263)GS(0.004)GS(0.001)T(0.001)AGSR;GYYS(0.849)PYS(0.15)VS(0.001)GSGSTAGSR 187.56 1.11E-14 450000000 102451 128416 118648 138917 126206 110894 108988 80426.3 103578 95204 TRUE FALSE 110294.7273 122039.0482 122603.6651 127567.0367 121250.5183 115114.1489 94677.74468 90938.29355 112587.0272 92097.50128 1.197586534 1.325107049 1.331237693 1.385130269 1.316545146 1.249916092 1.028016432 0.987413255 1.222476459 1 16.49087439 -7.133587599 3.687648759 1.058655796 1.315041434 0.717406316 0.074861883 0.130621175 3.176485198 0.030152196 0.022898506 7.35E-08 7.133587599 0.256385638 GYYSPYS(ph)VSGSGS(ph)TAGSR ddPTM_A459_MK2206_30min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GY(0.015)Y(0.001)S(0.028)PY(0.001)S(0.656)VS(0.313)GS(0.011)GS(0.519)T(0.253)AGS(0.202)R 125.61 0.014877 8484500 4351.4 3818.2 4218.7 2936.8 4359 3081 3253.3 2862.9 2767 2692.3 TRUE FALSE 3981.29058 3569.634486 3932.346398 3162.992845 4185.3718 3255.443557 3036.278293 2837.869967 3054.639552 3025.84245 1.315762683 1.179715912 1.299587293 1.04532635 1.383208766 1.07588006 1.003448905 0.937877637 1.009517053 1 11.56312116 -6.965184321 6.836963168 0.990046388 1.233581991 0.66391606 0.086774984 0.112498312 15.76453973 0.02940731 0.025664747 1.08E-07 6.965184321 0.243535603 GYYSPYS(ph)VSGSGSTAGSR ddPTM_A459_MK2206_30min_R1 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYS(0.005)PYS(0.817)VS(0.141)GS(0.035)GS(0.001)TAGSR;GYYS(0.03)PYS(0.618)VS(0.35)GS(0.003)GSTAGSR 236.31 8.15E-25 200997000 8346.9 6575.9 7356.5 6449.8 7280.2 5913.5 6290.8 6149 4610 4475 TRUE FALSE 7636.952324 6147.807715 6857.161276 6946.564714 6990.214218 6248.31726 5871.15221 6095.239941 5089.225997 5029.396785 1.51846288 1.222374765 1.363416245 1.38119242 1.389871294 1.242359179 1.167367074 1.211922662 1.011895902 1 12.29616966 -7.678556313 0.734589106 0.993787711 1.375210003 0.758297719 0.077733314 0.331523135 0.34145589 0.069652293 0.034540468 2.10E-08 7.678556313 0.381422292 GYYSPYS(ph)VSGSGSTAGSR ddPTM_A459_MK2206_30min_R2 5 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GY(0.001)YS(0.009)PYS(0.984)VS(0.006)GSGSTAGSR;GYYS(0.178)PYS(0.819)VS(0.003)GSGSTAGSR;GYYS(0.077)PY(0.003)S(0.786)VS(0.12)GS(0.006)GS(0.006)T(0.001)AGSR;GY(0.009)Y(0.003)S(0.451)PYS(0.529)VS(0.007)GS(0.001)GSTAGSR;GYYS(0.001)PYS(0.576)VS(0.338)GS(0.084)GS(0.001)TAGSR 237.34 7.31E-25 489434900 124689 127109 120492 138288 126507 122457 115603 82677.3 106939.3 92750 TRUE FALSE 134235.2857 120796.9519 124509.1431 126989.428 121539.6995 127117.1869 100424.1872 93483.50698 116240.687 89723.5751 1.496098273 1.346323436 1.38769708 1.415340705 1.354601613 1.416764622 1.11926199 1.04190573 1.295542302 1 16.45319949 -7.264049964 24.29294776 1.117669624 1.397929099 0.751164209 0.081343576 76.63630743 713135.9323 0.031035191 0.022025938 5.44E-08 7.264049964 0.280259475 GYYSPYSVS(ph)GSGS(ph)TAGSR ddPTM_A459_MK2206_30min_R2 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GYYS(0.043)PY(0.001)S(0.078)VS(0.838)GS(0.041)GS(0.636)T(0.332)AGS(0.031)R 107.63 0.028682 13575000 32934 41133 39632 41304 37898 34839 31142 26370 27401 31091 TRUE FALSE 35455.45236 39090.39503 40953.3111 37929.33108 36409.9341 36164.82256 27053.01799 29816.64954 29784.28945 30076.50322 1.178842238 1.299698796 1.361638047 1.261095108 1.210577368 1.202427766 0.899473513 0.991360243 0.990284317 1 14.87634922 -7.124428732 3.87813233 0.970187531 1.265841259 0.869708205 0.053737858 0.085582617 2.244789136 0.023029264 0.017599548 7.51E-08 7.124428732 0.295653727 GYYSPYSVS(ph)GSGSTAGSR ddPTM_A459_MK2206_30min_R1 3 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYS(0.016)PYS(0.333)VS(0.646)GS(0.005)GSTAGSR;GYYSPYS(0.004)VS(0.953)GS(0.043)GSTAGSR;GYYSPYS(0.038)VS(0.829)GS(0.133)GS(0.001)TAGSR 297.55 1.81E-95 177664000 9121.7 8729.2 9364.7 6275.5 8665.9 6114.6 7445.8 6331.4 5103.1 5376.8 TRUE FALSE 8345.851515 8160.927493 8729.050256 6758.840097 8320.718853 6460.803368 6949.104268 6276.045237 5633.585507 6042.918577 1.381096139 1.350494366 1.444508998 1.118472806 1.376937112 1.069152808 1.149958282 1.038578488 0.932262356 1 12.56102979 -6.871150969 0.597145826 0.959624204 1.398209425 0.730977967 0.091119651 0.418097615 0.321309981 0.072866681 0.074679828 1.35E-07 6.871150969 0.438585221 GYYSPYSVS(ph)GSGSTAGSR ddPTM_A459_MK2206_30min_R2 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYS(0.003)PYS(0.06)VS(0.933)GS(0.004)GSTAGSR;GYY(0.003)S(0.106)PYS(0.007)VS(0.708)GS(0.152)GS(0.023)TAGSR 142.4 0.00030179 36337200 30406 32618 31803 35829 31789 34826 40225 22426.1 29840 30406 TRUE FALSE 32733.90674 30998.23755 32863.29615 32901.65609 30540.80413 36151.32783 34943.40918 25357.26827 32435.42926 29413.85471 1.112873748 1.053865189 1.117272675 1.118576821 1.038313558 1.229057809 1.187991493 0.862085861 1.102726235 1 14.84420824 -7.745559183 24.99999238 0.986804468 1.120420762 0.399896681 0.07534991 230.7631279 363288.5132 0.035243516 0.020263327 1.80E-08 7.745559183 0.133616294 GYYSPYSVSGS(ph)GSTAGSR ddPTM_A459_MK2206_30min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYSPYSVS(0.003)GS(0.985)GS(0.005)T(0.007)AGSR 217.65 3.18E-14 4096000 1193.1 1020.1 1081.8 921.6 1051.1 809.78 1065.7 950.14 675.55 677.02 TRUE FALSE 1091.62058 953.6913046 1008.37043 992.5817917 1009.232461 855.6290438 994.6090975 941.8330262 745.77584 760.8943488 1.434654603 1.253382031 1.325243684 1.304493578 1.326376602 1.124504401 1.30715795 1.237797373 0.980130607 1 9.571552337 -8.202906319 3.74090452 0.984040325 1.289837077 0.73060921 0.073183708 0.116898372 3.15161235 0.059580737 0.018967405 6.27E-09 8.202906319 0.305796752 GYYSPYSVSGSGS(ph)TAGS(ph)R ddPTM_A459_MK2206_30min_R1 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GYYSPYSVSGS(0.025)GS(0.957)T(0.022)AGS(0.996)R;GYYSPYS(0.001)VS(0.003)GS(0.065)GS(0.883)T(0.048)AGS(1)R 183.76 1.06E-08 64179000 23321.6 23215.1 21084.6 16430.5 21879.6 19712.4 22145.6 19313.1 20104.2 20007.6 TRUE FALSE 21337.97545 21703.79277 19653.4361 17695.97996 21008.0892 20828.49905 20668.30743 19144.2476 22194.10353 22486.29254 0.948932574 0.965201032 0.874018519 0.786967435 0.934262025 0.926275375 0.919151407 0.851374124 0.987005906 1 14.45675819 -8.371886327 6.547845924 0.998262756 0.90094344 0.3581366 0.049730499 0.294899775 14.78979552 0.050967393 0.013210293 4.25E-09 8.371886327 -0.097319317 GYYSPYSVSGSGS(ph)TAGS(ph)R ddPTM_A459_MK2206_30min_R2 3 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GYYSPYS(0.004)VS(0.001)GS(0.218)GS(0.755)T(0.021)AGS(1)R;GYYSPYSVS(0.003)GS(0.313)GS(0.587)T(0.097)AGS(1)R;GYYSPYSVSGS(0.016)GS(0.98)T(0.005)AGS(0.999)R 181.86 1.85E-08 96740600 550756 731502 635132 725320 711605 762714 640362 470022 559002 657133 TRUE FALSE 592922.3028 695176.6744 656306.9839 666059.0358 683663.8122 791739.6157 556281.7002 531455.4892 607622.9835 635690.804 0.932721221 1.093576736 1.032431144 1.047772017 1.075465946 1.245479108 0.875082189 0.83602828 0.955846741 1 19.27796569 -7.310484789 24.99998869 0.903074904 1.069617676 0.448195766 0.083423272 339.549459 173077.7354 0.034708059 0.023400229 4.89E-08 7.310484789 0.166542772 GYYSPYSVSGSGS(ph)TAGSR ddPTM_A459_MK2206_30min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYSPYSVS(0.001)GS(0.004)GS(0.497)T(0.497)AGS(0.001)R 189.45 6.37E-15 0 966.6 1128.1 1184.6 1175.5 903.99 799.54 1001.4 979.7 939.94 906.78 TRUE FALSE 884.3855942 1054.660485 1104.192652 1266.037214 867.9821641 844.8092639 934.5984332 971.1345862 1037.650127 1019.118752 0.867794447 1.034874967 1.083477907 1.242286251 0.851698747 0.828960572 0.917065289 0.952916021 1.018183724 1 9.993106455 -6.304846364 24.99998651 0.920270749 1.057404242 0.280629131 0.100687668 619.0148101 356516.0625 0.0329575 0.037370531 4.96E-07 6.304846364 0.137133493 GYYSPYSVSGSGS(ph)TAGSR ddPTM_A459_MK2206_30min_R2 3 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYSPYSVSGS(0.004)GS(0.957)T(0.026)AGS(0.012)R;GYYSPYSVSGSGS(0.495)T(0.495)AGS(0.01)R;GYYSPYSVSGSGS(0.333)T(0.333)AGS(0.333)R 214.54 2.90E-12 22275000 45107.8 62088.6 53818.9 55125.1 64759.3 54308 62137 48192.6 55539.1 57456.3 TRUE FALSE 48561.28785 59005.37041 55613.19526 50621.20299 62216.52449 56374.729 53978.33726 54491.53829 60369.79053 55581.50564 0.873695077 1.061600792 1.000570147 0.910756238 1.119374579 1.014271354 0.971156442 0.980389748 1.086148888 1 15.7623173 -4.748932425 24.97389526 1.013416344 0.873694749 0.357907992 0.057096782 688.9495325 1375610.872 0.014031051 0.245159081 1.78E-05 4.748932425 -0.139721596 GYYSPYSVSGSGST(ph)AGSR ddPTM_A459_MK2206_30min_R2 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYSPYSVSGSGS(0.155)T(0.83)AGS(0.014)R 163.44 1.17E-05 108670000 14714 18869 10805 14122 17314 16785 15132 11153 13589 16950 TRUE FALSE 15840.51515 17931.9929 11165.23331 12968.18743 16634.16536 17423.76494 13145.15022 12610.73539 14770.94666 16396.92289 0.966066332 1.093619396 0.680934672 0.79089153 1.014468719 1.06262407 0.801683969 0.769091584 0.900836502 1 14.00113748 GYYSPYSVSGSGSTAGS(ph)R ddPTM_A459_MK2206_30min_R1 5 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYSPYSVS(0.208)GS(0.025)GS(0.228)T(0.22)AGS(0.318)R;GYYSPYSVSGSGS(0.011)T(0.001)AGS(0.988)R;GYYSPYSVSGSGSTAGS(1)R;GYYSPYSVSGSGS(0.003)TAGS(0.997)R;GYYSPYSVSGSGST(0.049)AGS(0.95)R 263.45 6.47E-43 2030212000 9675.7 10029.8 9568.4 7717 10188.2 9604.6 9962.4 9388.5 8128 8636.7 TRUE FALSE 8852.730906 9376.858197 8918.923667 8311.364677 9782.38242 10148.40415 9297.826473 9306.417334 8972.934686 9706.6796 0.912024634 0.966021192 0.918843934 0.856252088 1.007799044 1.045507276 0.957879198 0.958764245 0.924408248 1 13.24476216 -6.282938744 24.99415321 0.982261238 0.917449324 0.42212342 0.039491986 914.7653612 1063460.304 0.013255972 0.015044271 5.21E-07 6.282938744 -0.064811915 GYYSPYSVSGSGSTAGS(ph)R ddPTM_A459_MK2206_30min_R2 5 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYSPYSVS(0.001)GS(0.002)GS(0.057)T(0.001)AGS(0.939)R;GYYSPYSVSGSGS(0.184)T(0.184)AGS(0.632)R;GYYSPYSVSGSGS(0.004)T(0.043)AGS(0.954)R;GYYSPYSVSGSGS(0.001)T(0.001)AGS(0.998)R;GYYSPYSVS(0.005)GS(0.029)GS(0.029)T(0.098)AGS(0.84)R 313.76 9.00E-112 2549040000 165676 241678 193233 240476 219591 248123 238357 184872 227375 222256 TRUE FALSE 178360.2819 229676.622 199675.2918 220828.3416 210968.754 257565.4946 207060.4396 209035.4052 247151.6665 215003.8049 0.829568026 1.068244453 0.928705852 1.027090389 0.981232653 1.197957844 0.963054769 0.972240492 1.149522291 1 17.71400267 -4.754554823 24.99730231 1.029200885 0.829567684 0.360302535 0.080844114 268.041574 973152.4518 0.019595056 0.188576686 1.76E-05 4.754554823 -0.199633201 HAALCAMEVLPLALPS(ph)PPR ddPTM_A459_MK2206_30min_R1 2 HAALCAMEVLPLALPSPPR 19 0 Q9ULI0-2;Q9ULI0;H7BYF1 Q9ULI0-2 ATAD2B ATPase family AAA domain-containing protein 2B 1 HAALCAMEVLPLALPS(1)PPR;HAALCAMEVLPLALPS(1)PPR 118.37 0.00029903 46825200 3708.3 4270.8 3608.3 4041.6 4062.7 3838.6 4019.7 3951.7 3666.9 3781.3 TRUE FALSE 3392.889612 3992.770144 3363.378649 4352.884732 3900.874056 4055.938215 3751.553147 3917.150704 4048.087377 4249.755991 0.798372805 0.93952927 0.791428651 1.024266979 0.91790542 0.954393199 0.882769071 0.921735439 0.952545837 1 12.05316429 -3.190869501 0.623907894 0.93992229 7.34E-11 0.314905061 0.060020483 28.16836658 1.707438557 0.025386104 29.31712401 0.000644363 3.190869501 -0.93992229 HAALCAMEVLPLALPS(ph)PPR ddPTM_A459_MK2206_30min_R2 2 HAALCAMEVLPLALPSPPR 19 0 Q9ULI0-2;Q9ULI0;H7BYF1 Q9ULI0-2 ATAD2B ATPase family AAA domain-containing protein 2B 1 HAALCAMEVLPLALPS(1)PPR;HAALCAMEVLPLALPS(1)PPR 91.643 0.0016052 15035600 46390 69496 61815 78333 58324 59009 74270 57649 55560 62694 TRUE FALSE 49941.65407 66044.9297 63875.88125 71932.94333 56033.90671 61254.62884 64518.25979 65183.92224 60392.50837 60648.29991 0.82346338 1.088982375 1.053218002 1.186066937 0.923915539 1.00999746 1.063809866 1.074785647 0.995782379 1 15.88817958 -4.754820254 24.99880777 1.04692088 0.823463003 0.501038772 0.065986751 190.9968621 721282.3944 0.016418848 0.154534739 1.76E-05 4.754820254 -0.223457877 HAASYS(ph)SDSENQGSYSGVIPPPPGR ddPTM_A459_MK2206_30min_R1 2 HAASYSSDSENQGSYSGVIPPPPGR 25 0 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;F2Z3L2;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 HAAS(0.022)YS(0.546)S(0.426)DS(0.006)ENQGSYSGVIPPPPGR;HAAS(0.045)Y(0.001)S(0.51)S(0.136)DS(0.303)ENQGS(0.003)Y(0.001)S(0.001)GVIPPPPGR 137.28 2.40E-08 19656200 1689.9 1327.69 1280.69 1299.56 1664.42 1542.56 1623.26 1343.09 1219.28 1158.31 TRUE FALSE 1546.165131 1241.25714 1193.760331 1399.652336 1598.122627 1629.898414 1514.975287 1331.347506 1346.028519 1301.810188 1.187703972 0.953485502 0.917000299 1.075158537 1.227615702 1.252024627 1.163745146 1.02268942 1.033966804 1 10.34630339 -4.498395389 18.61747036 1.080484473 1.493884732 0.091840456 0.106241261 18195050.47 358114137.8 0.030136019 232652871.5 3.17E-05 4.498395389 0.41340026 HAASYS(ph)SDSENQGSYSGVIPPPPGR ddPTM_A459_MK2206_30min_R2 3 HAASYSSDSENQGSYSGVIPPPPGR 25 0 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;F2Z3L2;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 HAAS(0.04)YS(0.792)S(0.153)DS(0.014)ENQGSYSGVIPPPPGR;HAAS(0.013)YS(0.76)S(0.221)DS(0.006)ENQGSYSGVIPPPPGR;HAAS(0.068)Y(0.012)S(0.63)S(0.205)DS(0.082)ENQGS(0.003)YSGVIPPPPGR 150.34 3.64E-10 29133800 47848.5 41288 43268.8 39729.8 35319.2 28414.1 74729 44558.8 50001 49968 TRUE FALSE 51511.81795 39237.69796 44711.3602 36483.74825 33932.39074 29495.41849 64916.99253 50382.78815 54349.9966 48337.54825 1.065668819 0.811743652 0.924981961 0.754770351 0.701988247 0.610196825 1.342993074 1.042311619 1.124384636 1 15.56085668 -7.260026241 24.9999919 1.130948297 0.809160629 0.540785671 0.142568785 102.4453131 1812393.51 0.057877026 0.042345114 5.50E-08 7.260026241 -0.321787668 HAASYSS(ph)DSENQGSYSGVIPPPPGR ddPTM_A459_MK2206_30min_R1 1 HAASYSSDSENQGSYSGVIPPPPGR 25 0 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;F2Z3L2;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 HAAS(0.014)Y(0.001)S(0.209)S(0.759)DS(0.017)ENQGSYSGVIPPPPGR 109.17 1.49E-07 7775500 888.29 778.11 1050.3 779.84 1177.7 955.41 1186.1 885.78 798.04 905.06 TRUE FALSE 812.7362709 727.4548976 979.0085623 839.9034119 1130.789715 1009.504489 1106.977433 878.0357188 880.9991138 1017.185666 0.799004841 0.715164323 0.962467911 0.825712985 1.111684674 0.992448599 1.088274708 0.863201034 0.866114362 1 9.990367321 -5.448062815 1.572238774 0.977228884 0.748840015 0.418948804 0.093380391 0.436621528 1.977833273 0.029118145 0.102230546 3.56E-06 5.448062815 -0.228388869 HADGEKEDQFNGS(ph)PPRPQPR ddPTM_A459_MK2206_30min_R1 1 HADGEKEDQFNGSPPRPQPR 20 2 Q69YN4-3;Q69YN4;Q69YN4-4;Q69YN4-2 Q69YN4-3 KIAA1429 Protein virilizer homolog 1 HADGEKEDQFNGS(1)PPRPQPR 63.522 0.022611 6193000 424.35 498.29 710 590.73 722.3 545.75 568.46 542.79 645.23 400.24 TRUE FALSE 388.2568041 465.8512304 661.8071782 636.228127 693.5292615 576.6498934 530.5390706 538.0444443 712.3039675 449.8247529 0.863129033 1.03562827 1.471255581 1.4143911 1.541776563 1.281943445 1.179435029 1.196120135 1.583514386 1 8.813219241 -5.077234336 4.169795456 1.342504861 0.892618574 0.459705237 0.170638635 0.177582471 5.653205274 0.043801723 0.140995846 8.37E-06 5.077234336 -0.449886288 HADLEIR ddPTM_A459_MK2206_30min_R1 2 HADLEIR 7 0 Q14764;H3BP76;H3BUK7;H3BNF6;H3BRL2;H3BQK6 Q14764 MVP Major vault protein 0 ; 133.81 0.0019774 3228600 1685.22 1896.99 1398.99 1421.64 2076.13 1852.82 1888.09 2296.76 1826.4 1856.29 FALSE TRUE 1541.88319 1773.495606 1304.030457 1531.134959 1993.433346 1957.725067 1762.138961 2276.679669 2016.260816 2086.261219 0.73906526 0.850083197 0.625056174 0.733913349 0.955505153 0.938389234 0.844639657 1.091272583 0.966446961 1 11.02670409 -6.267523458 7.485856154 0.963456853 0.736819924 0.685250918 0.076029903 0.082221207 36.85048598 0.023885007 0.028551948 5.40E-07 6.267523458 -0.226636929 HAEATLGS(ph)GNLR ddPTM_A459_MK2206_30min_R2 1 HAEATLGSGNLR 12 0 Q9H8S9-2;Q9H8S9;D6RCK3;Q7L9L4;Q7L9L4-2 Q9H8S9-2 MOB1A;MOB1B MOB kinase activator 1A;MOB kinase activator 1B 1 HAEATLGS(1)GNLR 84.046 0.02201 7715000 31279 49551 51634 56503 57169 48249 47569 40804 47590 47131 TRUE FALSE 33673.74429 47090.36939 53355.45179 51886.52416 54924.25781 50085.1495 41323.13316 46137.2229 51729.29218 45593.11933 0.738570749 1.032839386 1.170252279 1.138034092 1.204661112 1.0985243 0.906345821 1.011933897 1.134585502 1 15.4765285 -4.774785836 3.961878427 1.085033698 0.704546467 0.595273581 0.08466119 0.179454323 5.254129062 0.023446988 0.198988016 1.68E-05 4.774785836 -0.380487231 HAELSGS(ph)PLK ddPTM_A459_MK2206_30min_R1 2 HAELSGSPLK 10 0 F6RRE2;E7EV10;Q9BTC8 F6RRE2 MTA3 Metastasis-associated protein MTA3 1 HAELS(0.004)GS(0.996)PLK;HAELS(0.004)GS(0.996)PLK 80.69 0.031058 5624400 7071.3 7120.1 7605.5 5633.9 6320.7 5871 6860.1 6585.6 6690.3 6559.1 TRUE FALSE 6469.848802 6656.580196 7089.25985 6067.823954 6068.933135 6203.410946 6402.475246 6528.022794 7385.780626 7371.690827 0.877661442 0.902992319 0.961687083 0.823125128 0.823275593 0.841518058 0.868521944 0.885552982 1.001911339 1 12.84777985 -8.237092841 4.336614603 1.003977764 0.871572402 0.640182386 0.038454124 0.13754522 6.180892958 0.035007924 0.011038333 5.79E-09 8.237092841 -0.132405362 HAEMVHTGLK ddPTM_A459_MK2206_30min_R2 2 HAEMVHTGLK 10 0 Q01518-2;Q01518;Q5T0R7;Q5T0R6;Q5T0R5;Q5T0R4;Q5T0R3;Q5T0R2;Q5T0R1;Q5T0R9 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein 0 ; 89.029 0.01772 17456700 92425 109709 112695 117584 109875 108253 123106 86500 104015 99492 FALSE TRUE 99501.12906 104261.0106 116452.1951 107977.0111 105560.7554 112372.6438 106942.0343 97805.847 113062.0367 96245.58419 1.033825395 1.083280978 1.209948446 1.121890547 1.09678544 1.167561553 1.111137048 1.016211266 1.174724406 1 16.55443273 -13.81531613 0.409389732 7.37E-09 1.115375314 0.250667917 0.057749309 637.0984547 7.822500804 559.8596948 0.035427489 1.53E-14 13.81531613 1.115375306 HALEHPEPGAEHNGLEGPNDS(ph)GRETPQPVPAQ ddPTM_A459_MK2206_30min_R2 1 HALEHPEPGAEHNGLEGPNDSGRETPQPVPAQ 32 1 Q5T457;A0A0A0MRN9;Q9GZV1-2;Q9GZV1 Q5T457 ANKRD2 Ankyrin repeat domain-containing protein 2 1 HALEHPEPGAEHNGLEGPNDS(0.5)GRET(0.5)PQPVPAQ 44.6 0.010205 6483300 11541 12045 11715 12142 17135 9757.9 13501 12013 9457.5 10607 TRUE FALSE 12424.58783 11446.86282 12105.57225 11149.95976 16462.1938 10129.24372 11728.30248 13583.14035 10280.09625 10260.89446 1.210867911 1.115581381 1.179777484 1.086645984 1.604362453 0.987169663 1.143009757 1.323777415 1.001871357 1 13.32486888 -8.288551275 22.58889146 1.00093516 1.202337415 0.213942349 0.157379585 405.1078072 337514.0528 0.147604326 0.038181725 5.15E-09 8.288551275 0.201402255 HALEHPEPGAEHNGLEGPNDSGRET(ph)PQPVPAQ ddPTM_A459_MK2206_30min_R2 1 HALEHPEPGAEHNGLEGPNDSGRETPQPVPAQ 32 1 Q5T457;A0A0A0MRN9;Q9GZV1-2;Q9GZV1 Q5T457 ANKRD2 Ankyrin repeat domain-containing protein 2 1 HALEHPEPGAEHNGLEGPNDS(0.443)GRET(0.557)PQPVPAQ 55.158 0.001079 6029200 7936.4 6308.6 8757.6 6184.8 9990.6 8158.1 9451.1 5547.6 7310.2 8201.4 TRUE FALSE 8544.016886 5995.324098 9049.574013 5679.482056 9598.318845 8468.562212 8210.159217 6272.690368 7946.027982 7933.78899 1.076915065 0.755669719 1.140637093 0.715859984 1.209802638 1.067404518 1.034834583 0.790629846 1.001542642 1 12.95379431 -4.460060863 23.07751004 0.968849887 4.120379574 0.041413695 0.156488744 2150.592007 782064.8726 0.036215562 3523.322366 3.47E-05 4.460060863 3.151529687 HALTS(ph)PSLGGQGR ddPTM_A459_MK2206_30min_R2 1 HALTSPSLGGQGR 13 0 M0QZ22;Q5PRF9;M0QX45 M0QZ22 SAMD4B Protein Smaug homolog 2 1 HALT(0.011)S(0.989)PSLGGQGR 88.78 0.015439 10832000 51577 54977 41461 50635 37631 40806 39112 23229 37456 34948 TRUE FALSE 55525.77478 52246.92212 42843.28905 46497.95853 36153.41786 42358.90092 33976.54742 26265.11006 40713.85518 33807.64962 1.642402693 1.545417168 1.267266122 1.375367973 1.069385724 1.252938356 1.004995846 0.776898434 1.204279376 1 15.0450621 -5.088573915 0.448969977 0.967931585 2.014169978 0.740568806 0.127366884 1.919372028 0.369454408 0.095192921 1.040953442 8.16E-06 5.088573915 1.046238393 HANS(ph)VDTSFSK ddPTM_A459_MK2206_30min_R2 1 HANSVDTSFSK 11 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 HANS(1)VDTSFSK 89.992 0.018822 3664600 56846 50987 45095 49594 50286 40575 67239 53114 46722 35543 TRUE FALSE 61198.17347 48455.05972 46598.44479 45542.01156 48311.51897 42119.11006 58410.43853 60056.18217 50785.79511 34383.23482 1.779884115 1.409264136 1.355266456 1.324541213 1.405089405 1.224989745 1.698805794 1.746670506 1.477051109 1 15.06941766 -7.26873858 24.97530118 1.542854375 1.408693928 0 0.233743814 1691.33483 5787127.204 0.093862629 0.064698521 5.39E-08 7.26873858 -0.134160447 HAPHCLS(ph)EEEGEQDRPR ddPTM_A459_MK2206_30min_R1 2 HAPHCLSEEEGEQDRPR 17 1 E9PH18;A0A0J9YX62;O75190-4;O75190-3;O75190 E9PH18 DNAJB6 DnaJ homolog subfamily B member 6 1 HAPHCLS(1)EEEGEQDRPR;HAPHCLS(1)EEEGEQDRPR 81.639 0.0065328 49067200 3846.94 4098.05 4465.74 4265.21 4188.14 4206.79 4218.19 4250.06 3449.15 3050.86 TRUE FALSE 3519.737552 3831.2662 4162.618011 4593.717213 4021.317515 4444.974814 3936.802242 4212.902174 3807.701485 3428.82357 1.026514628 1.117370469 1.21400764 1.339735662 1.172798026 1.296355652 1.148149551 1.228672776 1.110497933 1 11.74349796 -10.67805945 7.202581351 0.999999843 1.190570494 0.28228609 0.087316329 2.26E-07 2.65E-08 0.087047818 0.02111218 2.10E-11 10.67805945 0.19057065 HAPHCLS(ph)EEEGEQDRPR ddPTM_A459_MK2206_30min_R2 1 HAPHCLSEEEGEQDRPR 17 1 E9PH18;A0A0J9YX62;O75190-4;O75190-3;O75190 E9PH18 DNAJB6 DnaJ homolog subfamily B member 6 1 HAPHCLS(1)EEEGEQDRPR 91.622 0.0045823 10080000 7722.5 6808.7 9344.9 10916 9718.3 11592 11422 11999 8719.3 10592 TRUE FALSE 8313.740538 6470.589859 9656.454302 10024.12788 9336.710711 12033.14168 9922.27768 13567.3105 9477.688953 10246.38391 0.811382885 0.631499846 0.94242558 0.978308833 0.911220075 1.174379351 0.968368721 1.32410718 0.924978904 1 13.32282723 -5.671261267 0.942921086 1.084509392 0.692478354 0.479545478 0.127838423 0.582127343 0.915919948 0.048636938 0.176706771 2.13E-06 5.671261267 -0.392031038 HAPS(ph)PEPAVQGTGVAGVPEESGDAAAIPAK ddPTM_A459_MK2206_30min_R1 5 HAPSPEPAVQGTGVAGVPEESGDAAAIPAK 30 0 P13051 P13051 UNG Uracil-DNA glycosylase 1 HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(0.998)PEPAVQGT(0.002)GVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK 161.35 3.36E-23 373383800 21445.2 22846.4 22163.1 20339 21567.6 20760.6 21310.2 21071.3 19342.9 17365.3 TRUE FALSE 19621.17313 21359.09521 20658.73052 21905.5133 20708.51682 21936.04723 19888.63544 20887.07585 21353.66367 19516.64447 1.005355873 1.094404074 1.058518566 1.122401617 1.061069533 1.123966124 1.019060191 1.070218596 1.094125771 1 14.25241741 -11.26340248 7.95152961 0.999365098 1.073441169 0.252738197 0.03714326 0.000399509 1.30E-05 0.034367889 0.008265095 5.45E-12 11.26340248 0.07407607 HAPS(ph)PEPAVQGTGVAGVPEESGDAAAIPAK ddPTM_A459_MK2206_30min_R2 6 HAPSPEPAVQGTGVAGVPEESGDAAAIPAK 30 0 P13051 P13051 UNG Uracil-DNA glycosylase 1 HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(0.981)PEPAVQGT(0.019)GVAGVPEESGDAAAIPAK 130.95 4.99E-18 506180500 375302 428821 403759 465199 460352 372921 491194 376535 382610 342396 TRUE FALSE 404035.4097 407526.3727 417220.1235 427190.7536 442276.2674 387112.77 426699.6378 425749.4173 415888.7262 331223.6466 1.219826585 1.23036618 1.259632662 1.289735072 1.335279869 1.168735306 1.28825234 1.285383522 1.255613029 1 18.33744615 -8.612219941 18.97103345 1 1.260769764 0.762608586 0.043386899 5843.591749 1240848.774 0.042348537 0.010934345 2.44E-09 8.612219941 0.260769764 HAPS(ph)PEPAVQGTGVAGVPEESGDAAAIPAKK ddPTM_A459_MK2206_30min_R1 2 HAPSPEPAVQGTGVAGVPEESGDAAAIPAKK 31 1 P13051 P13051 UNG Uracil-DNA glycosylase 1 HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK 98.627 2.44E-08 19049400 2565.9 2425.32 2382.3 2139.32 2315.13 2001.57 2281.33 2036.19 2610.93 2061.83 TRUE FALSE 2347.656731 2267.431227 2220.596113 2304.090797 2222.91347 2114.897164 2129.146638 2018.387806 2882.345517 2317.265066 1.013115316 0.978494545 0.95828317 0.994314734 0.959283209 0.912669506 0.91881877 0.871021548 1.24385663 1 11.17820736 -8.252788271 24.99901669 1.121928322 0.951328878 0.508855743 0.067267172 436.3663058 1260972.444 0.045131151 0.016480803 5.59E-09 8.252788271 -0.170599444 HAPS(ph)PEPAVQGTGVAGVPEESGDAAAIPAKK ddPTM_A459_MK2206_30min_R2 3 HAPSPEPAVQGTGVAGVPEESGDAAAIPAKK 31 1 P13051 P13051 UNG Uracil-DNA glycosylase 1 HAPS(0.999)PEPAVQGT(0.001)GVAGVPEESGDAAAIPAKK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK;HAPS(0.997)PEPAVQGT(0.003)GVAGVPEESGDAAAIPAKK 141.29 9.80E-19 39345500 45839.4 58802 59539 64639 79850 60524.8 70944 47194.4 60111 53677.5 TRUE FALSE 49348.89971 55881.97819 61524.00054 59357.78693 76714.68779 62828.11368 61628.96758 53362.87012 65339.34612 51926.00757 0.950369613 1.076184764 1.184839802 1.143122487 1.477384674 1.209954638 1.186861276 1.027671347 1.258316385 1 15.66416968 -4.924890594 1.765740091 1.199145043 0.906860381 0.262318302 0.123831665 0.89133612 3.5548748 0.035187321 0.402373609 1.19E-05 4.924890594 -0.292284662 HAPTYTIPLS(ph)PVLS(ph)PTLPAEAPTAQVPPSLPR ddPTM_A459_MK2206_30min_R1 1 HAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPR 32 0 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 2 HAPT(0.001)YT(0.003)IPLS(0.986)PVLS(0.959)PT(0.052)LPAEAPTAQVPPSLPR 90.182 6.31E-07 6776000 1944.2 1963.5 1684.3 1236 1621.6 1659.7 1819 1482.7 1383.5 1404.8 TRUE FALSE 1778.835581 1835.675793 1569.974409 1331.196934 1557.008238 1753.67078 1697.657829 1469.73691 1527.319776 1578.83723 1.126674458 1.162675771 0.994386488 0.843150205 0.986174008 1.110735639 1.075258296 0.930898311 0.967370003 1 10.62464673 -5.267433469 22.56332113 0.988219096 1.144675136 0.447513265 0.069412192 112.8402347 424769.5052 0.020144525 0.043960618 5.40E-06 5.267433469 0.15645604 HAPTYTIPLS(ph)PVLSPTLPAEAPTAQVPPSLPR ddPTM_A459_MK2206_30min_R1 2 HAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPR 32 0 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 HAPTYT(0.001)IPLS(0.995)PVLS(0.004)PTLPAEAPTAQVPPSLPR;HAPT(0.013)YT(0.044)IPLS(0.929)PVLS(0.013)PT(0.001)LPAEAPTAQVPPSLPR 100.77 3.29E-09 80923000 6458.4 6615.3 6977.5 6036.2 7840.7 6812.9 7532.5 6366.4 5482 5540 TRUE FALSE 5909.079166 6184.642768 6503.88674 6501.10917 7528.388316 7198.64051 7030.020669 6310.739236 6051.873518 6226.337025 0.949045826 0.993303566 1.044576725 1.044130625 1.209119951 1.156159791 1.129078082 1.013555677 0.971979752 1 12.60416796 -5.291595645 1.648114594 1.086380929 0.951261933 0.256355896 0.070171952 0.66054193 3.06753093 0.022772232 0.102687608 5.11E-06 5.291595645 -0.135118995 HAPTYTIPLS(ph)PVLSPTLPAEAPTAQVPPSLPR ddPTM_A459_MK2206_30min_R2 2 HAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPR 32 0 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 HAPT(0.012)Y(0.002)T(0.012)IPLS(0.705)PVLS(0.216)PT(0.053)LPAEAPT(0.001)AQVPPSLPR;HAPT(0.023)Y(0.004)T(0.127)IPLS(0.817)PVLS(0.025)PT(0.003)LPAEAPT(0.001)AQVPPSLPR 45.846 0.013837 44036000 16767.2 19226.2 20394.9 25061 22540 21662 25411 15008 24723 20061.9 TRUE FALSE 18050.90972 18271.45487 21074.85579 23013.43613 21654.96635 22486.36259 22074.50518 16969.59713 26873.36185 19407.28185 0.930110145 0.941474185 1.085925167 1.185814496 1.115816554 1.15865595 1.137434152 0.874393296 1.384705085 1 14.24431045 -5.299019407 3.808479903 1.11994308 0.931343424 0.263389801 0.122930643 0.277537105 8.663556687 0.030837279 0.076438855 5.02E-06 5.299019407 -0.188599656 HAQDSDPRS(ph)PTLGIAR ddPTM_A459_MK2206_30min_R2 1 HAQDSDPRSPTLGIAR 16 1 F5GX58;F8WDL1;Q99618;J3KMY0 F5GX58 CDCA3 Cell division cycle-associated protein 3 1 HAQDSDPRS(0.861)PT(0.139)LGIAR 96.707 0.0044076 8893600 20445 35207 29486 44821 34989 37158 37485 24005 31367 26842 TRUE FALSE 22010.28492 33458.67158 30469.04852 41158.98092 33615.15605 38572.07373 32563.17447 27142.53592 34095.24496 25966.14774 0.847653073 1.288549688 1.173414279 1.585101546 1.294576169 1.485475401 1.25406259 1.045304687 1.3130652 1 14.66434438 -8.878102497 0.826632907 1.004957888 1.280598872 0.118805267 0.197539482 2.551518004 3.167951228 0.199993324 0.068127188 1.32E-09 8.878102497 0.275640984 HAS(ph)APSHVQPSDSEK ddPTM_A459_MK2206_30min_R1 3 HASAPSHVQPSDSEK 15 0 A0A3B3IRT3;O60343-2;O60343-3;O60343 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 HAS(0.999)APS(0.001)HVQPSDSEK;HAS(0.959)APS(0.041)HVQPSDSEK;HAS(0.62)APS(0.38)HVQPSDSEK 103.75 0.0036035 41505900 7337.6 6900.6 7485.7 5970.5 9296.8 9304.3 11880.1 12192.3 10297.3 9845.1 TRUE FALSE 6713.498589 6451.369686 6977.59154 6430.348945 8926.48877 9831.101425 11087.60021 12085.70401 11367.74118 11064.78531 0.606744586 0.583054212 0.630612465 0.581154425 0.806747579 0.888503586 1.002061937 1.092267375 1.027380185 1 13.43368784 -6.696290462 1.293364655 1.044946319 0.591407057 0.965998704 0.03604204 0.068188285 0.239614343 0.016633886 0.015925899 2.01E-07 6.696290462 -0.453539262 HAS(ph)APSHVQPSDSEK ddPTM_A459_MK2206_30min_R2 2 HASAPSHVQPSDSEK 15 0 A0A3B3IRT3;O60343-2;O60343-3;O60343 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 HAS(0.516)APS(0.484)HVQPSDSEK;HAS(0.893)APS(0.107)HVQPSDSEK 160.93 0.00012473 15895100 29884.9 42709.4 37867 42153.4 50194.9 49739 71888 56755 58442 56703 TRUE FALSE 32172.91092 40588.5133 39129.46688 38709.33238 48223.99602 51631.8525 62449.01925 64173.07337 63525.17952 54852.78575 0.586531941 0.739953546 0.713354232 0.705694922 0.879153089 0.941280407 1.138484006 1.169914572 1.158103069 1 15.74327727 -6.719615492 1.23060775 1.136833877 0.679046315 0.900468176 0.063478479 0.123554772 0.394711684 0.030258421 0.028373679 1.91E-07 6.719615492 -0.457787562 HAS(ph)PILPITEFSDIPR ddPTM_A459_MK2206_30min_R1 2 HASPILPITEFSDIPR 16 0 G5E972;P42167;H0YJH7 G5E972 TMPO "Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 HAS(1)PILPITEFSDIPR;HAS(0.938)PILPIT(0.062)EFSDIPR 119.5 0.0011103 14226900 4112.8 3936.4 2377.7 2936.9 4609.1 3853.7 3499.9 3002.4 3459.6 2974.3 TRUE FALSE 3762.984763 3680.139645 2216.308349 3163.100547 4425.509787 4071.893164 3266.428057 2976.150333 3819.2378 3342.778739 1.125705605 1.100922296 0.663013774 0.946248853 1.3239015 1.218116268 0.977159517 0.890322264 1.142533831 1 11.70683215 HAS(ph)PILPITEFSDIPR ddPTM_A459_MK2206_30min_R2 3 HASPILPITEFSDIPR 16 0 G5E972;P42167;H0YJH7 G5E972 TMPO "Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 HAS(0.999)PILPIT(0.001)EFSDIPR;HAS(0.993)PILPIT(0.007)EFSDIPR;HAS(0.996)PILPIT(0.003)EFS(0.001)DIPR 80.719 0.015015 12206600 38473 21206.8 25246.5 30663.7 20304.2 25528.5 38326 20933.1 25825.8 22277.5 TRUE FALSE 41418.52246 20153.70115 26088.20571 28158.37762 19506.95509 26500.00496 33293.75016 23669.12804 28072.0814 21550.587 1.921920849 0.935181077 1.210556618 1.306617663 0.905170476 1.229665111 1.544911522 1.098305491 1.302613307 1 14.39543955 -4.749233118 24.99993818 1.184196592 1.921922533 0.596270419 0.185218006 411.1499439 842034.8077 0.045833355 0.769243043 1.78E-05 4.749233118 0.73772594 HASAPS(ph)HVQPSDSEK ddPTM_A459_MK2206_30min_R2 1 HASAPSHVQPSDSEK 15 0 A0A3B3IRT3;O60343-2;O60343-3;O60343 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 HAS(0.379)APS(0.621)HVQPSDSEK 106.31 0.0023541 14258000 52220 63185 67932 64446 79391 70469 121150 87326 78924 86585 TRUE FALSE 56218.00335 60047.32478 70196.81897 59180.55565 76273.71043 73150.74717 105242.8595 98739.80803 85788.66686 83759.73854 0.671181696 0.716899621 0.838073521 0.706551342 0.910624982 0.873340204 1.256485052 1.178845705 1.024223193 1 16.35396932 -6.854457525 1.72520629 1.125107601 0.745570426 0.743130896 0.095509747 0.173221898 1.061733175 0.041718153 0.035439604 1.40E-07 6.854457525 -0.379537175 HASSSPES(ph)PKPAPAPGSHR ddPTM_A459_MK2206_30min_R2 1 HASSSPESPKPAPAPGSHR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HAS(0.003)S(0.003)S(0.003)PES(0.991)PKPAPAPGSHR 50.722 0.035796 3881000 590.58 4478.2 2317.5 8621.8 8558.5 9066.7 8201 4069 7066.2 5671.8 TRUE FALSE 635.7952589 4255.8191 2394.764293 7917.37136 8222.450287 9411.739622 7124.198849 4600.832271 7680.805303 5486.72963 0.11587873 0.775656791 0.43646479 1.443003737 1.498606791 1.715364207 1.298441755 0.838538179 1.399887696 1 12.42173077 -5.758464373 24.99586012 1.33051996 0.475965564 0.674094769 0.276980004 47.2611132 397076.7626 0.07942211 0.13027262 1.74E-06 5.758464373 -0.854554396 HATAEEVEEEERDR ddPTM_A459_MK2206_30min_R1 2 HATAEEVEEEERDR 14 1 Q8TDN6 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog 0 ; 90.434 0.014538 18382000 1844.62 1363.74 1854.73 1227.8 1851.31 1757.48 2124.89 1907.81 1338.19 1711.18 FALSE TRUE 1687.725383 1274.960278 1728.836095 1322.365369 1777.568402 1856.986999 1983.142465 1891.130218 1477.299639 1923.173897 0.877572946 0.662945915 0.898949439 0.687595319 0.924288961 0.965584548 1.031182083 0.983338127 0.768157077 1 10.9092735 -6.40708314 6.26619741 0.952749281 0.782231036 0.419356684 0.094631279 0.227835162 10.97061457 0.028541522 0.032328144 3.92E-07 6.40708314 -0.170518245 HATAEEVEEEERDR ddPTM_A459_MK2206_30min_R2 2 HATAEEVEEEERDR 14 1 Q8TDN6 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog 0 ; 89.356 0.015628 17119600 19364.2 22174.1 22805.9 20042 19439.2 21922 19237.6 18618.2 14966.1 21586.1 FALSE TRUE 20846.73804 21072.96644 23566.23732 18404.50449 18675.91933 22756.25707 16711.68001 21051.66267 16267.82433 20881.74732 0.99832345 1.009157237 1.128556771 0.881368029 0.894365737 1.089767859 0.800300844 1.008137027 0.779045167 1 14.34995482 -5.775371713 24.99828109 0.922980223 1.041726982 0.26257706 0.094764887 304.9545861 547168.5867 0.025406127 0.037901338 1.68E-06 5.775371713 0.118746759 HAVSDPSILDSLDLNEDEREVLINNINR ddPTM_A459_MK2206_30min_R1 1 HAVSDPSILDSLDLNEDEREVLINNINR 28 1 P05198;H0YJS4;G3V4T5 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 0 76.049 7.72E-05 1776000 233.99 244.08 266.37 315.29 417.28 502.47 326.41 173.32 315.42 194.32 FALSE TRUE 214.0879218 228.1903476 248.2895465 339.5736904 400.658854 530.9194172 304.6357845 171.8046815 348.2090377 218.3938286 0.980283752 1.044857124 1.136889023 1.554868526 1.834570402 2.431018406 1.394891909 0.786673701 1.594408779 1 7.770788279 -5.692067416 3.94328521 1.552963318 1.030418376 0.199266246 0.421192422 0.370940232 11.30146461 0.12914891 0.228992517 2.03E-06 5.692067416 -0.522544942 HAYGDQYR ddPTM_A459_MK2206_30min_R1 3 HAYGDQYR 8 0 O75874;C9J4N6 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic 0 ;; 127.46 0.00643 36942100 5756.68 5364.89 4958.08 4832.8 5485.72 4761.25 6165.91 5148.18 2360.56 4291.76 FALSE TRUE 5267.044136 5015.634686 4621.539344 5205.023093 5267.212156 5030.82786 5754.593394 5103.170005 2605.948659 4823.45563 1.091964878 1.039842609 0.958138666 1.07910666 1.091999711 1.042992462 1.193043709 1.057990453 0.540265913 1 12.23585138 -8.157061748 9.687819696 0.7708723 1.06960764 0.513051425 0.116650843 0.265566189 22.49787 0.073286345 0.02762883 6.97E-09 8.157061748 0.29873534 HAYGDQYR ddPTM_A459_MK2206_30min_R2 3 HAYGDQYR 8 0 O75874;C9J4N6 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic 0 ;; 139.97 0.0033313 30800300 44557.4 53382.8 46475 59605.3 48961.3 53302.4 51673.2 46267.8 51115.5 48745.7 FALSE TRUE 47968.7488 50731.88778 48024.4533 54735.35632 47038.83335 55330.86018 44888.44677 52315.16032 55561.43379 47155.1318 1.01725405 1.075850832 1.018435353 1.160750786 0.997533705 1.173379398 0.951931318 1.109426659 1.178269081 1 15.52512716 HCAPS(ph)PDRSPELSSS(ph)R ddPTM_A459_MK2206_30min_R1 1 HCAPSPDRSPELSSSR 16 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 2 HCAPS(1)PDRS(0.13)PELS(0.165)S(0.115)S(0.59)R 148.97 0.0093737 5468600 2338.7 2321.1 2141.3 2190.1 2718.8 2481.9 2194.5 2312.2 1873.3 1818.2 TRUE FALSE 2139.781284 2169.995968 1995.954522 2358.781881 2610.504439 2622.423033 2048.108909 2291.984679 2068.036239 2043.452343 1.047140293 1.061926389 0.976756091 1.154312157 1.277497099 1.283329676 1.002278774 1.12162375 1.01203057 1 10.99679288 -8.190840955 1.535903 0.9979807 1.123273143 0.163032846 0.09804585 0.814879444 3.539874576 0.101921015 0.031601385 6.44E-09 8.190840955 0.125292443 HCAPS(ph)PDRSPELSSSR ddPTM_A459_MK2206_30min_R2 1 HCAPSPDRSPELSSSR 16 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 HCAPS(0.999)PDRSPELSSSR 56.819 0.047532 4496200 8073.2 12104 8797.1 10708 11756 12206 12084 11365 11339 8726 TRUE FALSE 8691.290399 11502.93296 9090.390923 9833.122147 11294.40037 12670.50788 10497.35628 12850.44452 12325.24572 8441.271335 1.02961865 1.362701482 1.076898321 1.164886396 1.337997551 1.501018908 1.243575271 1.522335204 1.460117231 1 13.04324458 -6.309555497 4.638213323 1.375550091 1.166613796 0.223931865 0.163894816 0.282120543 13.66905577 0.048694283 0.056743602 4.90E-07 6.309555497 -0.208936295 HCCPAGFR ddPTM_A459_MK2206_30min_R2 1 HCCPAGFR 8 0 K7EQ05;P28799-3;P28799;P28799-2 K7EQ05 GRN Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 0 91.906 0.036824 957540 5345.8 4103.7 4690.1 4165.1 3626.1 4117.7 4297.3 3595.2 3689.1 3336.1 FALSE TRUE 5755.078558 3899.916225 4846.465593 3824.798007 3483.721094 4274.401959 3733.059348 4065.104984 4009.97125 3227.24333 1.783280022 1.208435753 1.501735412 1.185159474 1.079472707 1.324474643 1.156733152 1.259621469 1.242537621 1 11.65608664 -1.877822539 0.970380603 1.205021588 199.9999438 0.617905417 0.131684192 417.592302 1.442252521 0.040170909 183342.8804 0.013248828 1.877822539 198.7949222 HCDSINSDFGSES(ph)GGCGDSSPGPSASQGPR ddPTM_A459_MK2206_30min_R2 1 HCDSINSDFGSESGGCGDSSPGPSASQGPR 30 0 Q8TD19;G3V459 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 HCDSINSDFGS(0.026)ES(0.512)GGCGDS(0.231)S(0.231)PGPS(0.001)ASQGPR 89.773 8.51E-07 10877000 14707 22338 12096 18501 19852 16190 17539 14459 15791 16147 TRUE FALSE 15832.97923 21228.7274 12499.2746 16989.40912 19072.51073 16806.12179 15236.10823 16348.84095 17164.47264 15620.12471 1.013626941 1.359062606 0.800203253 1.087661554 1.221021668 1.075927504 0.975415274 1.046652395 1.098869116 1 13.93111835 -7.394143972 0.011982529 1.77E-07 2.126804091 0.029458003 0.138574825 4019.134837 32.87233754 2870.236416 2958.235424 4.04E-08 7.394143972 2.126803914 HCDSINSDFGSESGGCGDS(ph)SPGPSASQGPR ddPTM_A459_MK2206_30min_R2 1 HCDSINSDFGSESGGCGDSSPGPSASQGPR 30 0 Q8TD19;G3V459 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 HCDSINSDFGSESGGCGDS(0.602)S(0.398)PGPSASQGPR 159.54 4.90E-23 5100100 7751.4 13520 8777.9 12429 12786 14592 12293 7904.4 11259 7609 TRUE FALSE 8344.853144 12848.61646 9070.550805 11413.51094 12283.9574 15147.30879 10678.91433 8937.53222 12238.28747 7360.718953 1.133700824 1.745565419 1.232291419 1.550597301 1.66885293 2.057857239 1.450797728 1.214220007 1.662648383 1 12.84563097 -10.0553928 0.726119752 0.954085272 1.538754238 0.251929077 0.268112841 24.01194247 8.99686493 3.275595859 0.096738056 8.80E-11 10.0553928 0.584668966 HCECAEEGTR ddPTM_A459_MK2206_30min_R2 2 HCECAEEGTR 10 0 Q86VP6-2;Q86VP6;A0A0C4DGH5 Q86VP6-2 CAND1 Cullin-associated NEDD8-dissociated protein 1 0 ; 114.89 0.0095777 7310100 30700 27414 26200 29817 30646 28972 31503 30610 26083 33110 FALSE TRUE 33050.4156 26052.66062 27073.49492 27380.85572 29442.68406 30074.54976 27366.61826 34610.8321 28351.65219 32029.62341 1.031870253 0.813392661 0.845264229 0.85486037 0.919232914 0.938960455 0.854415861 1.080588168 0.885169701 1 14.96711922 -7.737657884 24.99998235 0.98715932 0.890219258 0.260497537 0.072824217 286.8514875 301549.3248 0.033019787 0.019050343 1.83E-08 7.737657884 -0.096940062 HCGLSLSS(ph)TPPGK ddPTM_A459_MK2206_30min_R1 1 HCGLSLSSTPPGK 13 0 D6R9S4;Q09GN1;Q71F23-3;Q71F23 D6R9S4 CENPU;MLF1IP Centromere protein U 1 HCGLSLS(0.02)S(0.855)T(0.125)PPGK 89.992 0.014367 8363900 4115.4 3356.9 3720.9 3254.3 5473.4 4977 4498.7 3765.1 2860.3 2854 TRUE FALSE 3765.363619 3138.3652 3468.335675 3504.94675 5255.382888 5258.793439 4198.599931 3732.182128 3157.638421 3207.575067 1.173897272 0.978422994 1.081295247 1.092709189 1.638428651 1.639491931 1.308963888 1.163552544 0.984431652 1 11.64726731 -6.040988555 24.9499427 1.320352414 1.071105884 0.174239303 0.215050427 787.7432238 479501.8275 0.068628985 0.0886112 9.10E-07 6.040988555 -0.24924653 HCNGVDWR ddPTM_A459_MK2206_30min_R1 2 HCNGVDWR 8 0 O15371-2;O15371-3;O15371 O15371-2 EIF3D Eukaryotic translation initiation factor 3 subunit D 0 ; 106.6 0.019191 18883000 2406.8 2670.4 2467.3 2323.6 2646 2568 2675.8 2811.3 1891.31 2253.6 FALSE TRUE 2202.089021 2496.556475 2299.82655 2502.564075 2540.604217 2713.397941 2497.302264 2786.7211 2087.918443 2532.792982 0.869431113 0.985693064 0.908019947 0.988064991 1.00308404 1.071306641 0.985987517 1.100256168 0.824354165 1 11.30651345 -5.878708462 4.772289318 1.00481858 0.927784337 0.175166832 0.073272242 0.351159732 13.10634645 0.019864809 0.030257127 1.32E-06 5.878708462 -0.077034243 HCNGVDWR ddPTM_A459_MK2206_30min_R2 2 HCNGVDWR 8 0 O15371-2;O15371-3;O15371 O15371-2 EIF3D Eukaryotic translation initiation factor 3 subunit D 0 ; 116.37 0.013185 12903600 10979.7 16950.1 13764.2 12461.7 15772.8 14085.7 15069.8 11225.5 13613.4 13336.4 FALSE TRUE 11820.31427 16108.38268 14223.09156 11443.53925 15153.48062 14621.74118 13091.11716 12692.71139 14797.46892 12901.23436 0.916215762 1.248592362 1.102459746 0.88701119 1.174576029 1.133359861 1.014718188 0.983836975 1.146980863 1 13.65522149 -14.52287874 0.268748655 0.53139402 1.07452142 0.026824594 0.110509273 931.3026085 9.04795673 242.3531553 0.135788403 3.00E-15 14.52287874 0.5431274 HCQLEPDHEGVPEETDDFGEFR ddPTM_A459_MK2206_30min_R2 1 HCQLEPDHEGVPEETDDFGEFR 22 0 E9PFH4;C9J7E5;Q9Y5L0-5;Q9Y5L0-3;Q9Y5L0;Q9Y5L0-1 E9PFH4 TNPO3 Transportin-3 0 132.6 1.20E-05 2524200 7146.8 9098.5 7518.2 7699.9 9254 8344.9 10401 6889.7 7454 7016.5 FALSE TRUE 7693.964503 8646.68172 7768.853036 7070.793539 8890.641462 8662.471017 9035.336206 7790.207446 8102.335446 6787.55218 1.133540384 1.273902799 1.1445736 1.04172953 1.309845026 1.276229013 1.331162688 1.147719714 1.193705069 1 12.72867567 -8.992255547 1.556799611 1.000189117 1.211687703 0.337278226 0.08679571 3.09523135 8.957189262 0.087690364 0.025157113 1.02E-09 8.992255547 0.211498586 HCSQVDSVR ddPTM_A459_MK2206_30min_R2 1 HCSQVDSVR 9 0 Q14247-3;Q14247;Q14247-2 Q14247-3 CTTN Src substrate cortactin 0 107.79 0.014972 0 860.5 1300.2 793.99 1043.7 2727.6 4928.9 2514 1153.1 2210.1 1287.6 FALSE TRUE 926.3805416 1235.633959 820.4612303 958.4263714 2620.500719 5116.472743 2183.90878 1303.814129 2402.330503 1245.585717 0.743730864 0.992010378 0.658695117 0.769458382 2.103830096 4.107684178 1.75331874 1.046747816 1.928675377 1 10.28260859 -6.261686224 24.58971407 2.086426013 0.795884919 0.341584805 0.808924602 21.12265302 2104166.29 0.262837036 0.317177916 5.47E-07 6.261686224 -1.290541094 HDADGQATLLNLLLR ddPTM_A459_MK2206_30min_R1 2 HDADGQATLLNLLLR 15 0 O43242;O43242-2 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 0 ; 214.58 4.09E-07 5893200 3071.3 3668.6 3171.7 3147.9 3244.3 3131 3108.1 2685.4 2725.5 2616.9 FALSE TRUE 2810.069807 3429.773473 2956.413841 3390.351803 3115.072661 3308.274514 2900.76432 2661.921831 3008.825478 2941.101329 0.955448144 1.166152774 1.005206387 1.152749064 1.059151764 1.124842073 0.986285067 0.905076546 1.023026799 1 11.52214077 -7.372384779 5.934777281 0.968302811 1.080369706 0.342485525 0.066610366 0.233472419 10.78687127 0.026130319 0.017428189 4.24E-08 7.372384779 0.112066895 HDDGTQS(ph)DSENAGAHR ddPTM_A459_MK2206_30min_R1 2 HDDGTQSDSENAGAHR 16 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 HDDGTQS(0.917)DS(0.083)ENAGAHR;HDDGTQS(0.964)DS(0.036)ENAGAHR 124.73 0.00083644 1990320 265.091 457.34 601.42 0 470.01 420.73 417.53 541.35 134.07 167.08 TRUE FALSE 242.5436184 427.5670829 560.5972861 0 451.2885064 444.551369 389.6773355 536.617034 148.0070563 187.7791318 1.291643092 2.276968046 2.985407807 0 2.403294243 2.367416255 2.075189782 2.857703244 0.788197575 1 7.552892933 HDDGTQS(ph)DSENAGAHR ddPTM_A459_MK2206_30min_R2 2 HDDGTQSDSENAGAHR 16 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 HDDGTQS(1)DSENAGAHR;HDDGTQS(1)DSENAGAHR 327.02 5.37E-119 36254000 34585 31842 31754 39047 35263 25343 39699 26622 19612.8 15813.2 TRUE FALSE 37232.85419 30260.77258 32812.66251 35856.73519 33878.39744 26307.44562 34486.47361 30101.58681 21318.68589 15297.21658 2.433962675 1.978188151 2.145008691 2.344003892 2.214677243 1.719753753 2.254428015 1.967781959 1.393631696 1 13.90098155 -8.365980828 1.985917191 1.003301339 2.145461561 0.809994616 0.18779745 0.128544212 1.011941454 0.177777176 0.050767986 4.31E-09 8.365980828 1.142160223 up HDDGTQSDSENAGAHRR ddPTM_A459_MK2206_30min_R2 1 HDDGTQSDSENAGAHRR 17 1 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 0 45.864 0.041806 452250 0 0 0 0 0 430.3 440.76 0 0 0 FALSE TRUE 0 0 0 0 0 446.675368 382.8876826 0 0 0 0 HDDYYR ddPTM_A459_MK2206_30min_R2 4 HDDYYR 6 0 F8WJN3;Q16630-3;Q16630;Q16630-2 F8WJN3 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 0 ;;; 159.65 0.0032997 11529700 18437.6 21682.6 19937 19855 22332.1 17854.5 20036.8 15975.8 19024 19767.5 FALSE TRUE 19849.19683 20605.87361 20601.68963 18232.78299 21455.22954 18533.96551 17405.94409 18063.89191 20678.67313 19122.48809 1.038002834 1.07757283 1.077354031 0.953473361 1.121989431 0.969223535 0.910234275 0.944641295 1.081379841 1 14.22298263 -6.807360488 24.99990663 0.973206893 1.050754402 0.277653273 0.057744333 161.9677144 88175.72612 0.020285035 0.01788977 1.56E-07 6.807360488 0.077547509 HDGGS(ph)PSIK ddPTM_A459_MK2206_30min_R1 2 HDGGSPSIK 9 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 HDGGS(0.897)PS(0.103)IK;HDGGS(0.995)PS(0.005)IK 112.94 0.0094044 16465200 6296.4 3965.6 3429.49 4337 2017.93 2537.17 4283.3 5452.3 707.19 2535.64 TRUE FALSE 5760.858116 3707.438719 3196.705774 4671.036491 1937.551575 2680.822373 3997.568872 5404.631116 780.7049312 2849.774226 2.021513867 1.300958751 1.121740012 1.639090019 0.679896519 0.940713951 1.40276687 1.896512035 0.273953257 1 11.47663191 -2.482766601 1.152454353 1.141708899 199.9207938 0.274391661 0.437499295 489.2723034 3.855633484 0.12907584 253538.0496 0.003290284 2.482766601 198.7790849 HDGGS(ph)PSIK ddPTM_A459_MK2206_30min_R2 2 HDGGSPSIK 9 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 HDGGS(1)PSIK;HDGGS(0.998)PS(0.002)IK 73.666 0.042183 21133800 175329 151587 143208 155034 175636 106877 175590 214462 184311 127541 TRUE FALSE 188752.323 144059.41 147982.4832 142367.2263 168739.6481 110944.2791 152534.8221 242492.9198 200342.0376 123379.3476 1.52985347 1.167613647 1.199410486 1.153898355 1.367649055 0.899212723 1.236307575 1.965425531 1.623789082 1 16.9127414 -7.567856448 24.35919603 1.596939155 1.20737513 0.203690547 0.268698295 120.559773 65291.58079 0.12029592 0.069452936 2.70E-08 7.567856448 -0.389564025 HDGSEPCVDVLFGDGHR ddPTM_A459_MK2206_30min_R2 1 HDGSEPCVDVLFGDGHR 17 0 Q96EL3 Q96EL3 MRPL53 "39S ribosomal protein L53, mitochondrial" 0 108.66 0.0013073 2020500 6197.9 9537.1 7027.7 10418 10381 9784.7 9014.7 6474.6 6623.2 5062.4 FALSE TRUE 6672.415989 9063.501482 7262.00001 9566.816074 9973.38978 10157.06361 7831.059061 7320.852451 7199.273964 4897.214303 1.362492139 1.850746347 1.482883852 1.95352204 2.036543464 2.074049243 1.599084414 1.494901386 1.470075337 1 12.25774561 -8.439374739 1.068069221 1.020695682 1.789093727 0.523675222 0.223710803 0.420698556 1.048386044 0.223511399 0.073379653 3.64E-09 8.439374739 0.768398045 HDLDLICR ddPTM_A459_MK2206_30min_R1 4 HDLDLICR 8 0 P62136-3;P62136;P62136-2;E9PMD7;F8VYE8;F8W0W8;P36873;P36873-2;F8VR82;P62140 P62136-3;P62140 PPP1CA;PPP1CC;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit 0 ;;; 162.25 0.00052817 28786700 25602.6 27545.3 26197.7 21750.4 24015.6 25021.3 25876.5 20719.4 25031.4 24230.8 FALSE TRUE 23424.96443 25752.09596 24419.47311 23425.61958 23059.0078 26437.98438 24150.3259 20538.25247 27633.50361 27232.69444 0.860177992 0.945631583 0.896696916 0.86020205 0.846739857 0.970817796 0.886813677 0.75417629 1.01471794 1 14.73305211 -8.332137702 24.99999499 1.007359908 0.882355192 0.464358313 0.055537654 167.3177683 59163.8704 0.053656159 0.013853961 4.65E-09 8.332137702 -0.125004717 HDLDLICR ddPTM_A459_MK2206_30min_R2 4 HDLDLICR 8 0 P62136-3;P62136;P62136-2;E9PMD7;F8VYE8;F8W0W8;P36873;P36873-2;F8VR82;P62140 P62136-3;P62140 PPP1CA;PPP1CC;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit 0 ;;; 148.99 0.002093 35329600 177290 199880 181652 215249 188240 188715 218787 184923 162044 181608 FALSE TRUE 190863.4587 189954.2499 187708.187 197662.4682 180848.7518 195896.6816 190060.0041 209093.071 176138.2942 175682.1458 1.086413521 1.081238215 1.068453406 1.12511415 1.029408828 1.115063119 1.081840179 1.190178262 1.002596441 1 17.42260806 -8.460908613 24.99864514 0.99999934 1.094594485 0.480996235 0.039783401 159.9962188 64542.06677 0.036714699 0.009479695 3.46E-09 8.460908613 0.094595145 HDLGHFMLR ddPTM_A459_MK2206_30min_R1 1 HDLGHFMLR 9 0 P30043;M0R192;A0A2R8YEP4 P30043 BLVRB Flavin reductase (NADPH) 0 93.649 0.034125 11013000 5353.7 5062.6 4917.3 4917.7 5069 4983.3 4714.5 5042 3613.8 3885.6 FALSE TRUE 4898.339702 4733.02382 4583.527376 5296.462106 4867.090996 5265.45014 4400.004307 4997.918326 3989.467442 4366.977463 1.121677349 1.083821444 1.049588054 1.21284393 1.114521666 1.205742458 1.007562861 1.144479991 0.913553476 1 12.09241937 -8.258114739 24.99914709 0.95677673 1.116493125 0.513214956 0.062617079 213.4010083 1604670.491 0.045298755 0.015539037 5.52E-09 8.258114739 0.159716395 HDLSTEGDSR ddPTM_A459_MK2206_30min_R2 1 HDLSTEGDSR 10 0 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 0 99.283 0.026217 1763100 20480 24653 21666 23093 23090 22282 26674 18206 21840 22857 FALSE TRUE 22047.96455 23428.76787 22388.33363 21206.22803 22183.37058 23129.95712 23171.67176 20585.58671 23739.60372 22111.17796 0.99714111 1.059589313 1.01253464 0.95907274 1.003264983 1.0460753 1.047961886 0.931003619 1.073647174 1 14.43248827 HDS(ph)PDLAPNVTYSLPR ddPTM_A459_MK2206_30min_R1 3 HDSPDLAPNVTYSLPR 16 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR 233.48 1.31E-15 58573000 7743.7 8605.9 8497.1 7717.2 7993.7 6772.4 7636.3 7650.7 8134 7829.8 TRUE FALSE 7085.057651 8045.654346 7920.340526 8311.580081 7675.294002 7155.847435 7126.89636 7583.810737 8979.558408 8799.814736 0.805137138 0.914298151 0.900057645 0.944517621 0.872210863 0.813181601 0.809891637 0.861814818 1.020425847 1 13.10325744 -8.260275382 24.94923984 1.01021294 0.867249528 0.631915394 0.044265428 69.25672061 1484542.692 0.03750397 0.012387389 5.49E-09 8.260275382 -0.142963412 HDS(ph)PDLAPNVTYSLPR ddPTM_A459_MK2206_30min_R2 3 HDSPDLAPNVTYSLPR 16 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR 142.57 0.00039403 80314000 66154 75375 64715 71361 67091 61227 78714 58132 57066 49074 TRUE FALSE 71218.8011 71631.98711 66872.5658 65530.57803 64456.67023 63557.03639 68378.75725 65730.052 62029.49753 47472.7194 1.500204791 1.508908443 1.40865252 1.38038391 1.357762333 1.338811789 1.440380035 1.384585775 1.306634596 1 15.53481107 -13.28885151 0.17923236 1.08E-12 1.497735447 0.887977504 0.045463668 28.57991984 0.408854748 10.59996126 0.170818292 5.14E-14 13.28885151 1.497735447 HDS(ph)PEDVK ddPTM_A459_MK2206_30min_R2 2 HDSPEDVK 8 0 P31948-2;P31948-3;P31948;H0YGI8 P31948-2 STIP1 Stress-induced-phosphoprotein 1 1 HDS(1)PEDVK;HDS(1)PEDVK 110.53 0.011984 143307000 247010 244350 228000 219070 270530 177522 302260 258590 214750 201533 TRUE FALSE 265921.2755 232215.9343 235601.4062 201171.2802 259907.6329 184277.7241 262572.8989 292388.6009 233428.5668 194956.9947 1.363999665 1.191113633 1.208478857 1.031875161 1.333153669 0.945222429 1.346824715 1.499759479 1.197333633 1 17.57279639 HDSSTAVAGS(ph)PR ddPTM_A459_MK2206_30min_R1 1 HDSSTAVAGSPR 12 0 Q9H1I8-3;Q9H1I8 Q9H1I8-3 ASCC2 Activating signal cointegrator 1 complex subunit 2 1 HDSSTAVAGS(1)PR 114.54 0.0036338 1243100 397.62 219.34 300.03 337.3 330.61 258.14 282.19 321.56 225.19 249.67 TRUE FALSE 363.800331 205.0609261 279.6647995 363.2789044 317.4411036 272.7556637 263.36562 318.7486348 248.5993064 280.6010045 1.296504022 0.730791846 0.996663572 1.294645773 1.131289976 0.972040938 0.938576897 1.135949728 0.885953016 1 8.132376363 -6.777149596 24.55160642 0.992005507 1.076210384 0.089790131 0.161308068 668.856297 1045267.454 0.058495214 0.051775184 1.67E-07 6.777149596 0.084204877 HDSSTAVAGS(ph)PR ddPTM_A459_MK2206_30min_R2 1 HDSSTAVAGSPR 12 0 Q9H1I8-3;Q9H1I8 Q9H1I8-3 ASCC2 Activating signal cointegrator 1 complex subunit 2 1 HDSSTAVAGS(0.999)PR 87.831 0.033889 0 784.46 2456.4 2213.9 5089.3 2803.1 4945.8 2634.9 1882.7 3509.2 2854.5 TRUE FALSE 844.5188607 2334.418748 2287.710321 4673.48791 2693.03621 5134.015885 2288.934465 2128.775354 3814.423873 2761.357899 0.305834626 0.84538797 0.828472949 1.692460044 0.975257938 1.859235953 0.828916261 0.770916133 1.381358018 1 11.43116217 -4.893719332 1.494271836 1.196561924 0.108608022 0.375338829 0.349635058 0.985325409 2.424660049 0.100814784 1.504808099 1.28E-05 4.893719332 -1.087953901 HDT(ph)PDPSPLR ddPTM_A459_MK2206_30min_R1 1 HDTPDPSPLR 10 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 1 HDT(1)PDPSPLR 90.926 0.038978 4487100 666.94 654.56 596.76 547.02 554.62 512.56 470.37 456.85 544 593.14 TRUE FALSE 610.2132508 611.948025 556.2535939 589.1515752 532.528311 541.5807043 438.9924755 452.8558086 600.5507467 666.6226612 0.915380299 0.917982632 0.83443547 0.8837857 0.798845197 0.812424683 0.658532182 0.679328554 0.900885586 1 9.380726551 -6.069621307 1.289046289 0.781374713 0.904538135 0.109295728 0.096347185 0.732866935 2.47331596 0.035878747 0.062151017 8.52E-07 6.069621307 0.123163422 HDWDYCEHR ddPTM_A459_MK2206_30min_R1 2 HDWDYCEHR 9 0 P17568 P17568 NDUFB7 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 0 ; 120.99 0.0036123 7937600 2862.9 2194.15 2080.8 1990.58 3509 2722.4 4497.2 2539.8 1990.17 1998.93 FALSE TRUE 2619.395321 2051.310436 1939.561093 2143.894817 3369.2291 2876.539935 4197.199994 2517.594796 2197.055293 2246.57254 1.165951811 0.913084443 0.863342296 0.954295835 1.499719702 1.280412666 1.868268182 1.120638106 0.977958759 1 11.13350993 -6.243437237 23.8830856 1.325515552 0.961889201 0.264433478 0.254850011 585.6863274 777017.2851 0.077298946 0.099540632 5.71E-07 6.243437237 -0.363626351 HEAPS(ph)SPISGQPCGDDQNAS(ph)PSK ddPTM_A459_MK2206_30min_R1 1 HEAPSSPISGQPCGDDQNASPSK 23 0 O75376-2;O75376;A0A088AWL3;O75376-3;E7EVU5;E7EW50;J3KS51 O75376-2 NCOR1 Nuclear receptor corepressor 1 2 HEAPS(0.491)S(0.491)PIS(0.017)GQPCGDDQNAS(0.839)PS(0.161)K 83.601 0.0013819 5587300 9822.1 12043 11660 11656 7353.5 4868.7 6525.5 8881.9 7401.4 7361.5 TRUE FALSE 8986.678817 11258.99851 10868.55169 12553.74714 7060.594524 5144.361587 6090.195801 8804.246485 8170.802016 8273.498196 1.086200614 1.360851026 1.313658555 1.517344519 0.853398932 0.621787963 0.736108918 1.064150408 0.987587333 1 13.01428174 -6.27666631 24.68928069 0.860557359 1.322048117 0.65641356 0.156499613 431.9976343 700448.8604 0.051917557 0.059091353 5.29E-07 6.27666631 0.461490758 HEAPS(ph)SPISGQPCGDDQNAS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 HEAPSSPISGQPCGDDQNASPSK 23 0 O75376-2;O75376;A0A088AWL3;O75376-3;E7EVU5;E7EW50;J3KS51 O75376-2 NCOR1 Nuclear receptor corepressor 1 2 HEAPS(0.484)S(0.484)PIS(0.032)GQPCGDDQNAS(0.909)PS(0.091)K 77.062 0.0031917 26739000 140980 165500 153050 140370 153960 106560 163350 122330 115910 145270 TRUE FALSE 151773.5372 157281.5107 158152.6106 128901.322 147914.7568 110615.2155 141901.9488 138318.951 125991.6423 140529.8518 1.080009231 1.119203562 1.125402244 0.917252244 1.052550436 0.787129667 1.00976374 0.984267394 0.89654718 1 17.1005171 -5.758034006 24.99921686 0.949010128 1.109304902 0.516406786 0.070310886 67.36872057 494551.718 0.01866737 0.030729361 1.75E-06 5.758034006 0.160294774 HEAPS(ph)SPISGQPCGDDQNASPSK ddPTM_A459_MK2206_30min_R1 1 HEAPSSPISGQPCGDDQNASPSK 23 0 O75376-2;O75376;A0A088AWL3;O75376-3;E7EVU5;E7EW50;J3KS51 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 HEAPS(0.52)S(0.463)PIS(0.017)GQPCGDDQNASPSK 61.538 0.0059821 25036000 9163.4 9285.8 8866.3 7831.4 11107 9294.1 9873.3 9606.7 8391 7849.3 TRUE FALSE 8384.004711 8681.292732 8264.480259 8434.575785 10664.58467 9820.32391 9214.670172 9522.709635 9263.274477 8821.730543 0.950380956 0.984080469 0.93683209 0.956113514 1.20889939 1.113196993 1.044542239 1.079460497 1.05005185 1 13.10684598 -6.200596977 24.98738474 1.086282669 0.957366514 0.579765185 0.052431944 172.87623 70998.32148 0.015678564 0.020240932 6.30E-07 6.200596977 -0.128916155 HEAPS(ph)SPISGQPCGDDQNASPSK ddPTM_A459_MK2206_30min_R2 1 HEAPSSPISGQPCGDDQNASPSK 23 0 O75376-2;O75376;A0A088AWL3;O75376-3;E7EVU5;E7EW50;J3KS51 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 HEAPS(0.543)S(0.456)PIS(0.001)GQPCGDDQNASPSK 109.25 1.13E-05 40356000 112920 149710 138800 164070 145900 136170 170310 128290 124890 118940 TRUE FALSE 121565.242 142275.6191 143427.5227 150664.9562 140171.2329 141352.0448 147948.0924 145057.9435 135752.7065 115058.9975 1.056547029 1.236544922 1.246556339 1.309458273 1.218255294 1.228517959 1.285845484 1.260726641 1.179853026 1 16.81201428 -10.17085427 9.031757379 1.000000136 1.230965289 0.508764229 0.065980801 0 0 0.063649646 0.015437307 6.75E-11 10.17085427 0.230965152 HEAPSS(ph)PISGQPCGDDQNAS(ph)PSK ddPTM_A459_MK2206_30min_R2 2 HEAPSSPISGQPCGDDQNASPSK 23 0 O75376-2;O75376;A0A088AWL3;O75376-3;E7EVU5;E7EW50;J3KS51 O75376-2 NCOR1 Nuclear receptor corepressor 1 2 HEAPS(0.193)S(0.697)PIS(0.109)GQPCGDDQNAS(0.905)PS(0.095)K;HEAPS(0.462)S(0.513)PIS(0.025)GQPCGDDQNAS(0.971)PS(0.029)K 86.324 0.0010251 31501900 160016 184988 188794 157414 153132 127251 189731 139883 136091 155472 TRUE FALSE 172266.948 175801.7649 195088.2977 144552.7727 147119.2683 132093.626 164819.0918 158166.1884 147927.9492 150398.9614 1.145399851 1.168902786 1.297138597 0.961128796 0.978193379 0.878288153 1.095879189 1.051644153 0.983570284 1 17.19843508 -5.772605007 24.99971154 0.99375484 1.200322655 0.690516091 0.064760757 122.6334388 274574.8915 0.019147937 0.028697749 1.69E-06 5.772605007 0.206567814 HEAPSS(ph)PISGQPCGDDQNASPSK ddPTM_A459_MK2206_30min_R1 1 HEAPSSPISGQPCGDDQNASPSK 23 0 O75376-2;O75376;A0A088AWL3;O75376-3;E7EVU5;E7EW50;J3KS51 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 HEAPS(0.248)S(0.743)PIS(0.009)GQPCGDDQNASPSK 76.818 0.00053994 27650000 6549.5 5785.7 6416.9 5064.1 6866.9 6235.2 6741.5 6161 6111.9 5058.2 TRUE FALSE 5992.430632 5409.049878 5981.338707 5454.137859 6593.376832 6588.231636 6291.786836 6107.135027 6747.253877 5684.848003 1.054105691 0.9514854 1.052154552 0.959416656 1.159815852 1.15891078 1.106764303 1.074282905 1.186883778 1 12.47290606 -6.262847693 24.99902429 1.119996543 1.003937631 0.461130763 0.058148828 106.3451016 1887729.647 0.016684105 0.019929563 5.46E-07 6.262847693 -0.116058912 HEAPSS(ph)PISGQPCGDDQNASPSK ddPTM_A459_MK2206_30min_R2 1 HEAPSSPISGQPCGDDQNASPSK 23 0 O75376-2;O75376;A0A088AWL3;O75376-3;E7EVU5;E7EW50;J3KS51 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 HEAPS(0.226)S(0.772)PIS(0.002)GQPCGDDQNASPSK 110.7 1.02E-05 36975000 96147 134840 130290 153640 142890 121300 157810 116550 121150 114410 TRUE FALSE 103508.0882 128144.0417 134633.8036 141087.1205 137279.4206 125916.1565 137089.3574 131783.4852 131687.408 110676.8111 0.935228321 1.157821954 1.216459006 1.274766766 1.240362993 1.137692307 1.238645712 1.190705478 1.18983739 1 16.75599346 -10.40226704 4.826576905 0.999999426 1.182382765 0.254986364 0.089461639 14712311.68 15854030.21 87.23382533 0.022094245 3.96E-11 10.40226704 0.182383339 HEASGFAR ddPTM_A459_MK2206_30min_R2 1 HEASGFAR 8 0 H0Y6J6;Q5W012;Q96I25;Q5W011;Q5W010 H0Y6J6 RBM17 Splicing factor 45 0 115.49 0.01379 349630 1022.2 1115.3 1153.5 777.67 0 2091.2 1242.2 2267 1093.3 924.69 FALSE TRUE 1100.460418 1059.915824 1191.957114 714.1318734 0 2170.782081 1079.097648 2563.304684 1188.393258 894.517441 1.230228017 1.184902356 1.332514113 0.798343152 0 2.426763282 1.206346124 2.865572616 1.328530002 1 9.804965802 -6.776167543 24.99289515 1.847097036 0.941873255 0.311110959 0.630308959 279.2006495 473785.3993 0.215090567 0.190480113 1.67E-07 6.776167543 -0.905223781 HECQANGPEDLNR ddPTM_A459_MK2206_30min_R1 3 HECQANGPEDLNR 13 0 P60981;P60981-2 P60981 DSTN Destrin 0 ;; 177.36 0.00014579 154666300 8995.8 9600.9 8311.9 6734 8799.7 8386 9332.8 7755 7716.1 6797.13 FALSE TRUE 8230.659971 8975.879665 7747.711386 7252.653847 8449.189315 8860.808073 8710.225941 7687.198853 8518.216207 7639.20978 1.077422954 1.174974889 1.01420325 0.94939844 1.106029231 1.159911604 1.140199862 1.006281942 1.115065099 1 12.89920769 -10.62045012 3.807421748 0.99997099 1.081807678 0.11395968 0.069071461 7956987.771 4442589.761 1814.718812 0.017748942 2.40E-11 10.62045012 0.081836688 HECQANGPEDLNR ddPTM_A459_MK2206_30min_R2 3 HECQANGPEDLNR 13 0 P60981;P60981-2 P60981 DSTN Destrin 0 ;; 115.12 0.0057138 128298100 65344.9 83000 76503.3 83263 71729 80764 75304 65886.6 72694.5 75888 FALSE TRUE 70347.75579 78878.34069 79053.88184 76460.14655 68912.55905 83837.53061 65416.49434 74498.20484 79017.33621 73411.78077 0.958262489 1.074464342 1.076855527 1.041524204 0.938712538 1.142017395 0.891089872 1.014799043 1.07635771 1 16.16372398 -7.260347681 24.99870828 0.996794918 1.037593908 0.085124483 0.069086783 305.958857 7006210.797 0.027067467 0.019719665 5.49E-08 7.260347681 0.04079899 HEDEQALLDQNS(ph)QTPPPSPFSVQAFNK ddPTM_A459_MK2206_30min_R2 1 HEDEQALLDQNSQTPPPSPFSVQAFNK 27 0 A0A499FJI4;O75592-2;O75592;A0A087WY34 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 HEDEQALLDQNS(0.495)QT(0.495)PPPS(0.01)PFS(0.001)VQAFNK 75.82 9.29E-05 10914000 12289 14343 12936 17442 18037 20256 15541 12115 15158 13490 TRUE FALSE 13229.85529 13630.74748 13367.27978 16016.93281 17328.77675 21026.85627 13500.44803 13698.4721 16476.41544 13049.8224 1.013795811 1.044515937 1.024326567 1.227367876 1.327893684 1.611275282 1.034531169 1.049705634 1.262577752 1 13.67174255 -5.76463717 12.63574512 1.231830183 1.029211152 0.20653297 0.167484095 0.313561975 1166.71785 0.049485772 0.078029435 1.72E-06 5.76463717 -0.202619031 HEDEQALLDQNSQT(ph)PPPSPFSVQAFNK ddPTM_A459_MK2206_30min_R1 2 HEDEQALLDQNSQTPPPSPFSVQAFNK 27 0 A0A499FJI4;O75592-2;O75592;A0A087WY34 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 HEDEQALLDQNS(0.054)QT(0.946)PPPSPFSVQAFNK;HEDEQALLDQNS(0.004)QT(0.995)PPPSPFSVQAFNK 129.27 8.66E-12 21433000 5039.2 4536.7 4784.2 4085.3 5094.7 3890 4425.3 4728.5 3798.3 3494.9 TRUE FALSE 4610.589578 4241.360005 4459.461834 4399.950514 4891.767311 4110.248438 4130.096311 4687.159223 4193.146877 3927.874597 1.173812825 1.079810442 1.13533712 1.120186097 1.245398036 1.046430668 1.05148375 1.193306738 1.067535832 1 11.93953316 -8.525168933 22.85801373 0.999999997 1.12739956 0.329153894 0.05926257 81.88691719 817313.1195 0.056765536 0.014656798 2.98E-09 8.525168933 0.127399563 HEDEQALLDQNSQT(ph)PPPSPFSVQAFNK ddPTM_A459_MK2206_30min_R2 1 HEDEQALLDQNSQTPPPSPFSVQAFNK 27 0 A0A499FJI4;O75592-2;O75592;A0A087WY34 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 HEDEQALLDQNS(0.011)QT(0.989)PPPSPFSVQAFNK 131.27 7.95E-12 12357000 15205 23120 20502 21465 25275 21163 26827 17265 19890 15844 TRUE FALSE 16369.10649 21971.89442 21185.52645 19711.24084 24282.5765 21968.37279 23304.58267 19521.59478 21619.99625 15327.01158 1.067990744 1.433540668 1.382234648 1.286045929 1.584299482 1.433310902 1.520490968 1.273672606 1.410581322 1 13.90378881 -10.07034642 1.160255454 0.992045727 1.385742025 0.405302602 0.136514891 73.07284975 50.71431459 2.9040395 0.039463965 8.50E-11 10.07034642 0.393696298 HEDGTQS(ph)DSEDPLAK ddPTM_A459_MK2206_30min_R1 2 HEDGTQSDSEDPLAK 15 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 HEDGT(0.001)QS(0.915)DS(0.085)EDPLAK;HEDGT(0.016)QS(0.923)DS(0.061)EDPLAK 170.48 5.23E-05 5317400 2728.3 2586.21 2560.41 2176.65 2294.96 2006.17 2154.23 2238.42 2750.65 2551.87 TRUE FALSE 2496.243758 2417.847259 2386.616503 2344.29596 2203.546884 2119.757612 2010.525247 2218.84973 3036.589911 2868.014921 0.870373351 0.843038591 0.832149263 0.817393223 0.768317789 0.739102714 0.701016314 0.773653482 1.058777585 1 11.48583681 -8.259711256 24.99978085 1.029388815 0.791205065 0.783124874 0.049723776 72.43296578 1047889.372 0.043385877 0.0144508 5.50E-09 8.259711256 -0.23818375 HEDGTQS(ph)DSEDPLAK ddPTM_A459_MK2206_30min_R2 2 HEDGTQSDSEDPLAK 15 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 HEDGT(0.182)QS(0.818)DSEDPLAK;HEDGT(0.002)QS(0.997)DS(0.001)EDPLAK 180.93 2.03E-05 13126500 83315 88534 80934 87138 81268 65350 95182 69797 63340 46805 TRUE FALSE 89693.66046 84137.5303 83632.29917 80018.54666 78077.00998 67836.94004 82684.48907 78919.70755 68849.19871 45277.75668 1.980965203 1.858253069 1.847094584 1.767281608 1.724401024 1.498239865 1.826161346 1.743012758 1.520596508 1 15.46651486 -11.71605401 0.179765026 1.93E-17 1.974292643 0.851206847 0.102487738 15.85288496 0.386488673 7.000952959 0.396915819 1.92E-12 11.71605401 1.974292643 HEEFEEGCK ddPTM_A459_MK2206_30min_R1 1 HEEFEEGCK 9 0 I3L3Q4;F6TLX2;Q9HC38-2;I3L1F4;Q9HC38-3 I3L3Q4 GLOD4 Glyoxalase domain-containing protein 4 0 113.62 0.012657 9066400 7156.1 6603.4 6573.7 5541.1 8489.1 7388.4 9144.5 6474.5 4567.3 5487.3 FALSE TRUE 6547.436117 6173.51746 6127.495559 5967.876482 8150.961171 7806.724823 8534.48709 6417.894129 5042.087179 6167.108151 1.06167039 1.001039273 0.993576796 0.967694475 1.321682865 1.265864751 1.383871805 1.040665085 0.817577227 1 12.59037843 -6.221781027 24.99177017 1.158969442 1.004754174 0.136654651 0.157813444 1022.3032 644231.4586 0.050126061 0.064711243 6.00E-07 6.221781027 -0.154215268 HEEQPAPGYDTHGR ddPTM_A459_MK2206_30min_R1 1 HEEQPAPGYDTHGR 14 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 0 115.12 0.0016042 9268800 3821.8 3296.7 3430.4 2825.2 3308.8 2974.1 3340.1 3122.4 3284.5 2812.7 FALSE TRUE 3496.735841 3082.084231 3197.554006 3042.797394 3177.00349 3142.490972 3117.288023 3095.101186 3625.935529 3161.158511 1.106156439 0.974985664 1.011513341 0.962557677 1.005012396 0.994094716 0.986122022 0.979103444 1.147027432 1 11.62623766 -8.230143399 24.99844653 1.073513814 0.999764094 0.243444834 0.049936818 730.562133 583556.2816 0.031316423 0.011834009 5.89E-09 8.230143399 -0.073749721 HEEQPAPGYDTHGR ddPTM_A459_MK2206_30min_R2 2 HEEQPAPGYDTHGR 14 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 0 ; 92.939 0.0084999 13370900 42605 46478 40162 53954 42574 42786 40577 46753 38765 43265 FALSE TRUE 45866.87156 44169.97011 41500.98103 49545.78561 40902.33084 44414.25121 35249.19116 52863.77763 42136.70963 41853.26659 1.095897054 1.055352992 0.991582842 1.183797339 0.977279294 1.061189599 0.842208841 1.263074114 1.006772304 1 15.35305261 -4.796790577 4.600303657 1.04530119 1.098290202 0.021185022 0.109168563 0.999150365 44.24480052 0.026124178 0.158381118 1.60E-05 4.796790577 0.052989013 HEGVFICR ddPTM_A459_MK2206_30min_R1 1 HEGVFICR 8 0 M0R2U2;M0R1H0;M0R2B0;M0R0P1;M0QXL5;M0R2Q4;P22087;M0R299 M0R2U2 FBL rRNA 2-O-methyltransferase fibrillarin 0 119.41 0.011089 3439000 2739.5 3256.8 3261.9 2875.4 2987.2 2931.2 3674.4 2668.1 3186.2 3250.4 FALSE TRUE 2506.491139 3044.781728 3040.491316 3096.863806 2868.213498 3097.162011 3429.28748 2644.773083 3517.416892 3653.084091 0.686130151 0.833482518 0.832308055 0.847739534 0.785148501 0.847821165 0.938737624 0.723983631 0.962862284 1 11.83489925 -14.52287873 0.046422014 1.741922899 0.440827562 0.467625915 0.069401166 612.1607656 2.101702052 58.16495301 14.39940436 3.00E-15 14.52287873 -1.301095338 HEGVFICR ddPTM_A459_MK2206_30min_R2 2 HEGVFICR 8 0 M0R2U2;M0R1H0;M0R2B0;M0R0P1;M0QXL5;M0R2Q4;P22087;M0R299 M0R2U2 FBL rRNA 2-O-methyltransferase fibrillarin 0 ; 143.89 0.0029831 9729100 31204 29431 25837 33229 26818 31726 30189 26172 25211 29034 FALSE TRUE 33593.00223 27969.49934 26698.39268 30514.08441 25764.99057 32933.35516 26225.14804 29592.77026 27403.80721 28086.62296 1.196049888 0.995829914 0.950573258 1.086427672 0.91734028 1.172563722 0.93372379 1.053625076 0.975688934 1 14.77759555 -4.758433951 24.79033396 1.011611608 1.196050169 0.368363354 0.073226887 77.42037645 638477.1162 0.016677144 0.113781212 1.74E-05 4.758433951 0.18443856 HEHPPNPPVS(ph)PGK ddPTM_A459_MK2206_30min_R2 2 HEHPPNPPVSPGK 13 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 HEHPPNPPVS(1)PGK;HEHPPNPPVS(1)PGK 103.13 0.0057798 19421000 78446 76288 75316 71526 72113 49032 83589 70085 53385 77347 TRUE FALSE 84451.88607 72499.64885 77826.99785 65682.097 69281.48128 50897.94712 72613.66389 79245.35014 58028.3308 74823.17372 1.128686233 0.968946454 1.040145639 0.877830941 0.925936148 0.680243093 0.970470247 1.059101695 0.775539554 1 16.19119754 -4.931096396 0.994119727 0.897709138 1.181921361 0.275804304 0.108879224 2.207012821 2.064994931 0.037384266 0.637798393 1.17E-05 4.931096396 0.284212223 HELIEFR ddPTM_A459_MK2206_30min_R1 2 HELIEFR 7 0 A0A087WVQ6;Q00610-2;Q00610;J3KS13;K7EJJ5;J3KRF5 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ; 168.45 4.63E-05 12687800 7431.5 7536.8 8011.5 6609.5 6822.5 7033.8 6973.5 6141.9 7561.7 7437.1 FALSE TRUE 6799.411901 7046.15295 7467.701701 7118.564835 6550.745378 7432.047678 6508.310539 6088.202016 8347.765775 8358.464095 0.813476235 0.842996138 0.893429895 0.851659438 0.78372597 0.889164276 0.778649099 0.72838765 0.998720061 1 13.02902215 -8.284413387 24.36862984 0.999360167 0.826136367 0.682336734 0.048172826 398.0246594 422180.9862 0.0481637 0.012472897 5.20E-09 8.284413387 -0.1732238 HELIEFR ddPTM_A459_MK2206_30min_R2 4 HELIEFR 7 0 A0A087WVQ6;Q00610-2;Q00610;J3KS13;K7EJJ5;J3KRF5 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ;;; 200.12 7.78E-06 19739100 97352 106500 98229 111056 101576 98911 123689 102814 84548 94703 FALSE TRUE 104805.344 101211.3649 101503.9058 101982.3695 97587.61586 102675.1274 107448.4857 116252.1428 91901.83221 91612.84887 1.144002673 1.104772596 1.107965827 1.113188497 1.065217566 1.120750295 1.172853885 1.268950199 1.003154398 1 16.48326233 -6.999879428 24.99966239 1.135530704 1.105866815 0 0.076322837 18.79822622 3896703.379 0.026215285 0.022878657 1.00E-07 6.999879428 -0.029663889 HELLQPFNVLYEK ddPTM_A459_MK2206_30min_R1 2 HELLQPFNVLYEK 13 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 ; 116.63 0.0052999 18231300 9514.8 9858.4 10174.8 8936.2 9281.3 8597.8 9694.2 9975.6 8862.4 9196.6 FALSE TRUE 8705.516296 9216.616368 9484.162925 9624.467672 8911.606168 9084.600006 9047.517606 9888.384381 9783.678194 10335.94424 0.842256507 0.891705311 0.917590373 0.931164822 0.862195651 0.878932761 0.875345048 0.956698697 0.946568399 1 13.33538257 -7.811088445 5.941701027 0.965312979 0.887658586 0.65831912 0.027102656 0.13640291 10.69842395 0.015694529 0.007536939 1.54E-08 7.811088445 -0.077654393 HELQANCYEEVKDR ddPTM_A459_MK2206_30min_R1 3 HELQANCYEEVKDR 14 1 P23528;G3V1A4;E9PP50;E9PK25 P23528 CFL1 Cofilin-1 0 ;; 310.51 2.82E-92 62330800 6653.8 7771.1 7946.2 6680.9 6346.7 5337.1 6355.6 5589.9 7588.7 7339.2 FALSE TRUE 6087.85937 7265.199978 7406.834083 7195.464076 6093.8975 5639.28199 5931.62952 5541.028094 8377.572521 8248.435504 0.738062311 0.880797331 0.897968358 0.872342891 0.738794344 0.683678982 0.719121768 0.67176716 1.015655941 1 13.00990479 -8.278291179 24.38902759 1.007828087 0.780010105 0.586410861 0.078026976 552.7473965 799961.8513 0.085098415 0.022230263 5.27E-09 8.278291179 -0.227817981 HELQANCYEEVKDR ddPTM_A459_MK2206_30min_R2 2 HELQANCYEEVKDR 14 1 P23528;G3V1A4;E9PP50;E9PK25 P23528 CFL1 Cofilin-1 0 ; 166.64 0.00064557 117593300 944264 903063 1022357 1031977 931767 813546 1037017 868408 824905 1094674 FALSE TRUE 1016557.578 858218.2046 1056441.872 947661.178 895181.1458 844506.0631 900855.4222 981911.9073 896653.7458 1058954.877 0.959963073 0.81043888 0.997626901 0.894902322 0.845343995 0.797490131 0.850702369 0.92724622 0.846734611 1 20.01420969 -11.2846881 2.30673063 1.033901481 0.87985577 0.252913945 0.061237468 8421931.229 5379220.423 1616611.222 0.016634884 5.19E-12 11.2846881 -0.154045711 HELS(ph)PPQKR ddPTM_A459_MK2206_30min_R1 1 HELSPPQKR 9 1 C9JUL9;Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5 C9JUL9;Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 HELS(1)PPQKR 65.695 0.0449 66719000 5204.4 5931 5276.8 4198.4 4976.5 4744.6 6919.5 5281.3 7089.2 8461.5 TRUE FALSE 4761.738451 5544.890822 4918.625518 4521.761495 4778.275467 5013.235152 6457.91278 5235.126151 7826.147709 9509.774501 0.500720438 0.583072798 0.517217892 0.47548567 0.502459387 0.527166564 0.679081589 0.550499505 0.822958284 1 13.21519542 -8.476211789 0.921599228 1.005392405 0.520601727 0.886051819 0.054765826 0.17988262 0.338923997 0.051457572 0.017845557 3.34E-09 8.476211789 -0.484790678 HELS(ph)PPQKR ddPTM_A459_MK2206_30min_R2 3 HELSPPQKR 9 1 C9JUL9;Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5 C9JUL9;Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR 128.51 0.0077317 78712000 349635 319795 326752 324076 287855 248195 327314 273360 221427 292547 TRUE FALSE 376403.3244 303914.4453 337645.7486 297597.9541 276552.3663 257640.2346 284337.2786 309089.0906 240686.3202 283001.2153 1.330041371 1.073898022 1.193089394 1.051578361 0.977212646 0.910385612 1.004721051 1.092182909 0.850478044 1 18.11044872 -1.522878747 0.440035126 0.965569546 8.179835065 0.648811945 0.077351811 54.32961496 0.668843365 0.049652522 349.8718199 0.03 1.522878747 7.214265519 HEMLPASLIQAQR ddPTM_A459_MK2206_30min_R2 2 HEMLPASLIQAQR 13 0 P52209-2;P52209 P52209-2 PGD "6-phosphogluconate dehydrogenase, decarboxylating" 0 ; 150.51 0.00068919 10524200 80237 99898 93094 100854 86014 98839 102094 72797 75005 91523 FALSE TRUE 86380.00641 94937.21059 96197.7075 92613.90558 82636.65817 102600.3874 88688.93516 82311.81785 81528.79932 88536.61201 0.975641652 1.07229324 1.086530254 1.046052062 0.933361423 1.158847002 1.001720454 0.929692429 0.920848421 1 16.43398655 -7.538096417 7.81164305 0.947758137 1.046500501 0.333377704 0.060413166 0.178850893 60.19125123 0.027650209 0.016289731 2.90E-08 7.538096417 0.098742364 HEQEYMEVR ddPTM_A459_MK2206_30min_R2 2 HEQEYMEVR 9 0 F5GX39;E7EQ72;Q15363 F5GX39 TMED2 Transmembrane emp24 domain-containing protein 2 0 ; 133.81 0.004263 1929500 18656.2 14781.6 17225.6 16201.2 16167.6 16042.9 16629.5 12085.8 15475.1 11837.6 FALSE TRUE 20084.53302 14047.56724 17799.89291 14877.51013 15532.77879 16653.4238 14446.02667 13665.45556 16821.09623 11451.34008 1.753902414 1.226718195 1.554393877 1.299193809 1.356415815 1.454277288 1.261514074 1.193349901 1.468919454 1 13.48322882 -11.89508007 0.059694191 1.56E-11 2.043399241 0.445709972 0.149300521 217.2541978 1.63292271 46.41684755 15.88505356 1.27E-12 11.89508007 2.043399241 HEQNIDCGGGYVK ddPTM_A459_MK2206_30min_R2 2 HEQNIDCGGGYVK 13 0 P27797 P27797 CALR Calreticulin 0 ; 180.3 0.00015717 20670000 170028 191183 188877 196531 184523 178017 220518 157135 152995 173671 FALSE TRUE 183045.4744 181689.1302 195174.0649 180473.7886 177277.6999 184791.5617 191563.7217 177673.084 166302.2285 168004.1295 1.089529614 1.081456335 1.161721831 1.074222337 1.055198467 1.099922735 1.140232221 1.057551886 0.989869886 1 17.35813717 -8.082378725 3.754126964 0.996663769 1.099347344 0.66502934 0.029635515 0.150506482 3.858885776 0.02316463 0.00810525 8.27E-09 8.082378725 0.102683576 HERPAGPGT(ph)PPPDSGPLAK ddPTM_A459_MK2206_30min_R2 4 HERPAGPGTPPPDSGPLAK 19 1 H0YME5;Q9P2K8-2;Q9P2K8 H0YME5 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 1 HERPAGPGT(1)PPPDSGPLAK;HERPAGPGT(1)PPPDSGPLAK;HERPAGPGT(1)PPPDSGPLAK;HERPAGPGT(0.99)PPPDS(0.01)GPLAK 113.59 0.00072591 68142000 140062 172733 157190 178452 197619 152175 191285 156210 141948 157542 TRUE FALSE 150785.2544 164155.3304 162430.6361 163871.9008 189859.4851 157966.1263 166169.0497 176627.1833 154294.3805 152401.4174 0.989395354 1.077124696 1.06580791 1.075264939 1.24578556 1.036513498 1.090337954 1.15896024 1.012420902 1 17.2175168 -4.079756385 1.220553687 1.096496237 0.618953618 0.136309423 0.068854461 12.54717984 4.656955318 0.019803459 11.49701221 8.32E-05 4.079756385 -0.477542619 HET(ph)SDHEAEEPDCIISEAPTSPLGHLTSEYDTDR ddPTM_A459_MK2206_30min_R2 1 HETSDHEAEEPDCIISEAPTSPLGHLTSEYDTDR 34 0 Q6XZF7 Q6XZF7 DNMBP Dynamin-binding protein 1 HET(0.5)S(0.5)DHEAEEPDCIISEAPTSPLGHLTSEYDTDR 48.226 0.010419 3181200 2174.4 4015.5 3019.1 4884.2 4521.6 3806.3 5036.7 2987.8 4207.1 3618.6 TRUE FALSE 2340.873736 3816.096109 3119.755287 4485.145236 4344.059265 3951.151414 4375.37524 3378.315719 4573.025953 3500.525378 0.668720687 1.090149534 0.891224873 1.281277737 1.24097351 1.128730972 1.249919588 0.965088195 1.306382745 1 11.77335575 -4.341505629 1.072989384 1.158087643 1.29E-17 0.515483864 0.134499704 3.14224417 1.564393776 0.040051776 5.198543716 4.56E-05 4.341505629 -1.158087643 HEVSASTQS(ph)TPASSR ddPTM_A459_MK2206_30min_R2 2 HEVSASTQSTPASSR 15 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 HEVSASTQS(0.5)T(0.5)PASS(0.001)R;HEVS(0.001)AS(0.007)T(0.007)QS(0.452)T(0.367)PAS(0.036)S(0.131)R 163.45 6.82E-05 10665500 20001.7 15425.7 20678.9 22312 22614 19597.9 20153.5 12977.7 14592.8 19984.7 TRUE FALSE 21533.04553 14659.68217 21368.32421 20489.03823 21726.06073 20343.71182 17507.32124 14673.92995 15862.05537 19332.60088 1.113820415 0.758288151 1.105300024 1.059817991 1.123804338 1.052300823 0.905585407 0.759025133 0.820482224 1 14.23874812 -7.417303458 4.119422073 0.840494427 1.030592886 0.332491334 0.11386221 0.260682855 7.616495816 0.051369732 0.033033834 3.83E-08 7.417303458 0.190098459 HEVSASTQST(ph)PASSR ddPTM_A459_MK2206_30min_R1 2 HEVSASTQSTPASSR 15 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 HEVSAS(0.002)T(0.002)QS(0.007)T(0.989)PASSR;HEVSAS(0.001)T(0.001)QS(0.02)T(0.97)PAS(0.007)S(0.001)R 203.52 2.17E-05 7178900 1391.49 1447.38 1475.11 1018.03 1459.58 1607.75 2165.45 1559.83 1800.45 2212.7 TRUE FALSE 1273.136468 1353.155299 1374.983643 1096.438847 1401.441838 1698.779416 2020.996782 1546.192571 1987.61322 2486.825981 0.511952376 0.544129468 0.55290706 0.440898903 0.563546404 0.683111496 0.812681224 0.621753425 0.799257059 1 11.28008984 -8.132988555 0.334105872 1.030835771 0.465356546 0.817796679 0.069346953 0.615056417 0.226635846 0.129175767 0.099759837 7.36E-09 8.132988555 -0.565479225 HFDETVNR ddPTM_A459_MK2206_30min_R2 2 HFDETVNR 8 0 B7Z4L4;P04843 B7Z4L4 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 0 ; 164.72 0.00041008 3686300 12860.3 6015.3 8959.6 9349 7011.5 12763 12976.5 9290.4 8750.7 9881.5 FALSE TRUE 13844.89446 5716.588949 9258.308592 8585.156794 6736.19328 13248.70491 11272.66996 10504.68718 9511.820068 9559.067464 1.448351997 0.59802789 0.968536798 0.898116561 0.704691468 1.38598299 1.17926461 1.098923846 0.995057322 1 13.22265417 -6.754973393 24.99933472 1.140992172 0.906547563 0.165431189 0.231910995 254.5504618 984163.7071 0.074583864 0.072890867 1.76E-07 6.754973393 -0.23444461 HFEALANR ddPTM_A459_MK2206_30min_R2 1 HFEALANR 8 0 F5H365;Q15436-2;Q15436 F5H365 SEC23A Protein transport protein Sec23A 0 122.18 0.006603 0 3012.1 3545.2 2800.2 2819.7 3683.4 6346 3295.6 2534.1 4284.8 4685.9 FALSE TRUE 3242.708692 3369.150523 2893.55727 2589.32149 3538.771208 6587.501477 2862.883761 2865.315571 4657.484159 4532.999467 0.715356072 0.743249706 0.638331703 0.571215926 0.78066879 1.453232352 0.63156499 0.632101458 1.027461881 1 12.14625028 -6.528200211 24.99736719 0.929480491 0.671120341 0.266797918 0.22006652 227.1813603 1067164.327 0.075427394 0.075659565 2.96E-07 6.528200211 -0.25836015 HFEASCGQLS(ph)PAR ddPTM_A459_MK2206_30min_R1 4 HFEASCGQLSPAR 13 0 A0A1B0GV70;Q96N21-2;Q96N21 A0A1B0GV70 ENTHD2 AP-4 complex accessory subunit tepsin 1 HFEASCGQLS(1)PAR;HFEAS(0.001)CGQLS(0.999)PAR;HFEASCGQLS(1)PAR;HFEASCGQLS(1)PAR 187.63 0.00014234 29887500 3492.64 3190.47 3171.89 2702.15 3405.73 3079.3 3646.27 3230.65 2947.03 2575.89 TRUE FALSE 3195.572627 2982.769823 2956.590944 2910.270061 3270.072562 3253.647305 3403.033981 3202.404768 3253.384315 2895.0107 1.103820662 1.03031392 1.021271163 1.005270917 1.129554569 1.123880925 1.17548235 1.106180633 1.123790083 1 11.49935297 -6.271455423 24.62390957 1.119110483 1.038115362 0.321607364 0.048400977 566.9638337 1393848.218 0.014443802 0.01656654 5.35E-07 6.271455423 -0.080995121 HFEASCGQLS(ph)PAR ddPTM_A459_MK2206_30min_R2 4 HFEASCGQLSPAR 13 0 A0A1B0GV70;Q96N21-2;Q96N21 A0A1B0GV70 ENTHD2 AP-4 complex accessory subunit tepsin 1 HFEASCGQLS(1)PAR;HFEASCGQLS(1)PAR;HFEASCGQLS(1)PAR;HFEASCGQLS(1)PAR 163.44 0.00024013 45702400 94610.2 108532.5 98760.3 125652.6 118954.4 115726.3 129652.3 96266.9 115897.6 102224.3 TRUE FALSE 101853.6297 103142.9339 102052.9191 115386.3806 114283.6526 120130.3454 112628.7973 108849.3144 125978.1638 98888.72946 1.029982185 1.043020114 1.031997475 1.166830449 1.155679249 1.214803204 1.13894473 1.100725178 1.273938541 1 16.59351848 -5.759646381 24.99888496 1.156788192 1.035801915 0.377763567 0.067332354 44.52602761 620781.9702 0.017390898 0.028222688 1.74E-06 5.759646381 -0.120986276 HFELGGDK ddPTM_A459_MK2206_30min_R2 3 HFELGGDK 8 0 R4GN19;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881 R4GN19 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a 0 ;; 102.07 0.023216 38612100 328396 339114 320887 362756 333011 274354 404056 286689 270097 333579 FALSE TRUE 353538.2503 322274.0919 331585.2124 333117.6744 319935.3149 284794.7337 351002.9618 324160.2367 293589.5488 322694.3445 1.095582418 0.998697676 1.027551979 1.032300937 0.991450022 0.882552603 1.087725793 1.004542664 0.909806923 1 18.29980877 -1.522878747 0.574983071 0.983905766 6.191952703 0.242176998 0.055446098 244.5483578 2.064576704 0.026585412 1587.337553 0.03 1.522878747 5.208046937 HFGAEYR ddPTM_A459_MK2206_30min_R2 3 HFGAEYR 7 0 P04818-2;P04818 P04818-2 TYMS Thymidylate synthase 0 ;; 117.93 0.023158 2592000 1473.35 2712.28 1827.4 1952.27 1403.99 2553.25 1590.19 1514.39 1733.57 1962.36 FALSE TRUE 1586.150809 2577.592119 1888.324604 1792.763296 1348.862298 2650.415718 1381.396143 1712.325973 1884.352785 1898.328354 0.835551345 1.357822062 0.994730232 0.944390517 0.710552679 1.396184023 0.727690834 0.902017804 0.99263796 1 10.89051384 -5.50512702 24.42998957 0.949845647 1.116584062 0.064807839 0.212054449 1287.305066 1771589.738 0.053402868 0.107448778 3.13E-06 5.50512702 0.166738415 HFIDVGAGVIDEDYR ddPTM_A459_MK2206_30min_R1 1 HFIDVGAGVIDEDYR 15 0 P33316-2;H0YNJ9;A0A0C4DGL3;H0YKC5;H0YMP1;P33316;H0YKI0;H0YNW5;H0YMM5 P33316-2;P33316;H0YNW5 DUT "Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial" 0 102.64 0.0086671 6320100 2385.3 2190.7 2164.4 2098.3 2195.4 1940.6 2217.9 2215.3 2011.3 1798.1 FALSE TRUE 2182.417709 2048.085032 2017.486558 2259.91143 2107.952569 2050.475095 2069.947938 2195.931866 2220.381833 2020.862203 1.079943851 1.013470898 0.998329602 1.118290711 1.043095648 1.014653593 1.024289501 1.086631173 1.098729953 1 10.98075524 -7.760850079 24.99985126 1.06951042 1.040925457 0.037415473 0.041262882 41.75289371 1771522.337 0.020855394 0.011076014 1.73E-08 7.760850079 -0.028584963 HFILDECDK ddPTM_A459_MK2206_30min_R2 2 HFILDECDK 9 0 Q13838;Q13838-2;F6S4E6;A0A0A0MT12;F6TRA5;F6WLT2;A0A0G2JJZ9;Q5STU3;A0A140T9L4;A0A140T973;A0A140T9K1;A0A140T9X9;A0A140T996;F6UJC5;A0A140TA18;A0A140T9X3 Q13838 DDX39B Spliceosome RNA helicase DDX39B 0 ; 182.98 0.0023376 10009400 146469 154064 149290 152011 137424 98473 156017 136898 106101 162812 FALSE TRUE 157682.7793 146413.4058 154267.2541 139591.215 132028.0433 102220.459 135531.7805 154791.0386 115329.4732 157499.4578 1.00116395 0.929612126 0.979478001 0.88629648 0.838276176 0.649021022 0.860522204 0.982803629 0.732253144 1 17.26498734 -5.949032053 3.132284763 0.834973341 0.966268056 0.24170588 0.098901549 0.359817706 7.221801764 0.029818692 0.045594143 1.12E-06 5.949032053 0.131294715 HFKDEDEDEDVAS(ph)PDGLGR ddPTM_A459_MK2206_30min_R2 3 HFKDEDEDEDVASPDGLGR 19 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR 130.47 0.00015779 26878100 64022 79241 75874 77445 69667 56518 74326 56991 57621.2 46724 TRUE FALSE 68923.57354 75306.00717 78403.60129 71117.49577 66931.52353 58668.83209 64566.90692 64439.91938 62632.98782 45199.39971 1.524878073 1.666084232 1.734615986 1.57341682 1.480805585 1.298000249 1.428490364 1.425680867 1.385703975 1 15.46401599 -11.64453683 0.095909548 1.03E-09 1.997191084 0.798149767 0.087608738 41.79308509 0.54449229 11.62507894 2.385617352 2.27E-12 11.64453683 1.997191083 HFLPLDFSTQVNSSLTS(ph)PTGR ddPTM_A459_MK2206_30min_R1 2 HFLPLDFSTQVNSSLTSPTGR 21 0 P19793 P19793 RXRA Retinoic acid receptor RXR-alpha 1 HFLPLDFSTQVNS(0.001)S(0.002)LT(0.222)S(0.648)PT(0.127)GR;HFLPLDFSTQVNSS(0.001)LT(0.131)S(0.434)PT(0.434)GR 162.75 3.47E-08 21371000 7750.1 6635.7 7379.3 6515 7660.3 6904.8 6428.7 5997.9 5369.1 5190.6 TRUE FALSE 7090.913298 6203.714724 6878.413676 7016.786429 7355.17403 7295.743809 5999.853153 5945.460993 5927.237159 5833.650715 1.215519002 1.063436093 1.179092478 1.202812231 1.260818378 1.250630894 1.028490296 1.019166433 1.016042517 1 12.51018329 -7.291763256 12.17976291 1.01746941 1.191952552 0.74829713 0.050963019 0.889804132 356.0354763 0.023672393 0.016030137 5.11E-08 7.291763256 0.174483142 HFLPLDFSTQVNSSLTS(ph)PTGR ddPTM_A459_MK2206_30min_R2 1 HFLPLDFSTQVNSSLTSPTGR 21 0 P19793 P19793 RXRA Retinoic acid receptor RXR-alpha 1 HFLPLDFSTQVNS(0.006)S(0.014)LT(0.214)S(0.652)PT(0.114)GR 167.04 3.24E-09 0 11788 17503 15750 14073 18173 17483 17689 10536 12936 14213 TRUE FALSE 12690.49834 16633.82647 16275.09714 12923.19088 17459.43671 18148.32782 15366.41305 11913.09138 14061.1499 13749.23097 0.922996957 1.209800497 1.183709632 0.939920997 1.269848237 1.31995221 1.11761982 0.866455106 1.022686281 1 13.74706331 -7.641752137 6.870969144 0.959814159 1.148780826 0.288256967 0.125677062 0.270714356 15.12560545 0.061055265 0.034886201 2.28E-08 7.641752137 0.188966667 HFNAPSHIR ddPTM_A459_MK2206_30min_R1 1 HFNAPSHIR 9 0 J3KSS0;J3QRI7;J3QQQ9;J3QQV1;J3QRC4;P61254 J3KSS0 RPL26 60S ribosomal protein L26 0 120.31 0.0093031 6114200 965.19 714.09 792.89 665.91 908.76 949.28 928.41 996.96 656.28 517.95 FALSE TRUE 883.0955221 667.6026112 739.0708359 717.1985036 872.5621649 1003.027413 866.4774629 988.2436838 724.5026545 582.1175563 1.517039836 1.146851875 1.269624714 1.232050976 1.498944939 1.723066763 1.488492236 1.697670295 1.244598529 1 9.185166719 -6.268777178 23.48462212 1.493377401 1.27951277 0.074273249 0.218226549 419.8762312 1343811.421 0.063819985 0.073962344 5.39E-07 6.268777178 -0.213864631 HFPNIDR ddPTM_A459_MK2206_30min_R2 2 HFPNIDR 7 0 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ; 104.21 0.025484 6069500 9094 9243.5 8722.1 10235.5 8620.4 8907 10007.8 3904.7 9708.8 9037.9 FALSE TRUE 9790.243632 8784.481231 9012.890461 9399.226908 8281.919782 9245.962126 8693.763838 4415.057697 10553.25387 8742.994063 1.119781572 1.00474519 1.03087002 1.075058137 0.947263572 1.057528126 0.99436918 0.504982351 1.207052618 1 13.0939117 -7.543631279 24.99998796 0.86354571 1.033982367 0.100046154 0.168277219 403.7603813 486392.795 0.073088302 0.042203075 2.86E-08 7.543631279 0.170436657 HFS(ph)GLEEAVYR ddPTM_A459_MK2206_30min_R2 1 HFSGLEEAVYR 11 0 P50990-2;P50990;H7C4C8 P50990-2 CCT8 T-complex protein 1 subunit theta 1 HFS(1)GLEEAVYR 90.689 0.017316 0 3681.3 4181 5010.2 6288.4 7296.7 8750.9 3455.3 4970.2 5944.4 6644.3 TRUE FALSE 3963.143158 3973.37762 5177.237567 5774.617604 7010.194895 9083.921632 3001.614959 5619.822205 6461.433167 6427.497035 0.616591985 0.618184279 0.805482685 0.898424001 1.090657041 1.413290676 0.466995931 0.874340692 1.005279836 1 12.65004132 -5.509846272 2.101672278 0.964587614 0.609401513 0.289171836 0.218767266 0.459924417 3.972567289 0.067190298 0.172588534 3.09E-06 5.509846272 -0.355186101 HFS(ph)QEPR ddPTM_A459_MK2206_30min_R2 1 HFSQEPR 7 0 Q9Y4G2 Q9Y4G2 PLEKHM1 Pleckstrin homology domain-containing family M member 1 1 HFS(1)QEPR 85.676 0.023751 2499500 4686.6 3353.6 4674.6 5601.3 6032.7 4272.2 5611.3 1710.1 1598.8 6245.7 TRUE FALSE 5045.409699 3187.065101 4830.448831 5143.655872 5795.825886 4434.781565 4874.52957 1933.615942 1737.860734 6041.90332 0.835069585 0.527493561 0.799491249 0.851330384 0.959271537 0.73400406 0.806787085 0.320034241 0.287634648 1 12.56078738 -7.744754683 24.78609193 0.47787584 0.785074417 0.21817017 0.209902067 249.6525645 370874.624 0.096323177 0.055410611 1.80E-08 7.744754683 0.307198577 HFSGLEEAVYR ddPTM_A459_MK2206_30min_R1 2 HFSGLEEAVYR 11 0 P50990-2;P50990;H7C4C8 P50990-2 CCT8 T-complex protein 1 subunit theta 0 ; 142.08 0.0013357 6767300 2637.2 1944.05 2234.63 1703.61 4456.9 4733 3447.7 2352.41 1867.31 1360.11 FALSE TRUE 2412.892292 1817.491992 2082.949542 1834.822337 4279.372235 5000.97837 3217.710224 2331.843127 2061.423557 1528.610695 1.578487119 1.188982909 1.362642266 1.200320228 2.799517398 3.271584051 2.104989998 1.525465663 1.348560208 1 10.57800531 -6.228631712 24.93298756 2.102619722 1.324494336 0.203910609 0.637917157 980.3831545 745065.898 0.203828631 0.263123554 5.91E-07 6.228631712 -0.778125386 HFSGLEEAVYR ddPTM_A459_MK2206_30min_R2 1 HFSGLEEAVYR 11 0 P50990-2;P50990;H7C4C8 P50990-2 CCT8 T-complex protein 1 subunit theta 0 111.52 0.010801 0 4623.6 6211 4499.9 9598.5 7807.6 12561 7480.8 5913.5 9059.5 5189.8 FALSE TRUE 4977.586371 5902.570772 4649.92442 8814.271846 7501.034394 13039.01766 6498.561974 6686.414754 9847.478934 5020.457251 0.991460762 1.175703821 0.926195402 1.755671128 1.494093868 2.59717731 1.294416355 1.331833819 1.961470528 1 12.29360305 -5.763187914 24.99875551 1.667562977 1.045578306 0.304565821 0.414743987 54.36718632 777306.8457 0.114141538 0.179693446 1.73E-06 5.763187914 -0.621984671 HFSQS(ph)EETGNEVFGALNEEQPLPR ddPTM_A459_MK2206_30min_R1 2 HFSQSEETGNEVFGALNEEQPLPR 24 0 A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 HFS(0.215)QS(0.785)EETGNEVFGALNEEQPLPR;HFS(0.127)QS(0.873)EETGNEVFGALNEEQPLPR 193.51 6.00E-27 58214000 2361.3 2318.4 2478.22 1914.24 2694.6 2598.8 2598.8 2559.1 2429 2122.18 TRUE FALSE 2160.459035 2167.471739 2310.005331 2061.675096 2587.268376 2745.94181 2425.438794 2536.726059 2681.503242 2385.09168 0.905818025 0.908758249 0.968518464 0.864400775 1.084766845 1.151294029 1.016916379 1.063575912 1.1242768 1 11.21982901 -6.27120139 24.92999283 1.077713819 0.915697375 0.729865536 0.048098562 331.6551486 846971.5536 0.014588654 0.016745382 5.36E-07 6.27120139 -0.162016444 HFSQS(ph)EETGNEVFGALNEEQPLPR ddPTM_A459_MK2206_30min_R2 4 HFSQSEETGNEVFGALNEEQPLPR 24 0 A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 HFS(0.195)QS(0.802)EET(0.003)GNEVFGALNEEQPLPR;HFS(0.122)QS(0.849)EET(0.029)GNEVFGALNEEQPLPR;HFS(0.447)QS(0.53)EET(0.024)GNEVFGALNEEQPLPR;HFS(0.165)QS(0.835)EET(0.001)GNEVFGALNEEQPLPR 117.9 9.95E-08 42518600 34095.6 35931.2 35971.9 37473.9 39122.3 44290.9 39692.5 30134.2 32349.7 26474.5 TRUE FALSE 36705.98535 34146.90886 37171.18519 34412.1625 37586.16193 45976.42124 34480.82707 34072.84341 35163.41843 25610.63923 1.433231909 1.33330951 1.451396228 1.343666676 1.467599523 1.795207875 1.346347772 1.330417531 1.37300042 1 14.64445564 -8.928942234 0.991501241 1.000990733 1.451097635 0.51783221 0.127847982 1.192899158 1.917400119 0.131671837 0.042196829 1.18E-09 8.928942234 0.450106902 HFVALSTNTTK ddPTM_A459_MK2206_30min_R1 1 HFVALSTNTTK 11 0 P06744-2;P06744;A0A2U3TZU2;K7EQ48;A0A0J9YXP8;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90 P06744-2 GPI Glucose-6-phosphate isomerase 0 108.31 0.01411 10037000 4959.9 5019.1 4567.5 4146.7 5151 4590.2 4408.8 4392.6 4194.8 4390.8 FALSE TRUE 4538.03446 4692.355678 4257.470826 4466.079552 4945.824763 4850.093157 4114.696996 4354.195961 4630.864471 4934.765453 0.919604894 0.950877144 0.862750391 0.905023672 1.002241101 0.982841678 0.833818149 0.882351148 0.938416327 1 12.2687658 -8.545534396 21.17919039 1.000000003 0.918026378 0.205066171 0.048952079 1178.863099 1102038.534 0.050791127 0.013114213 2.85E-09 8.545534396 -0.081973625 HFVGMLPEK ddPTM_A459_MK2206_30min_R2 1 HFVGMLPEK 9 0 P60981;P60981-2;F6RFD5 P60981 DSTN Destrin 0 101.25 0.024151 2608800 43691 41920 45898 45060 37927 35865 48102 36802 35215 48753 FALSE TRUE 47036.01655 39838.31376 47428.21641 41378.45386 36437.79541 37229.86771 41786.14962 41612.14776 38277.93705 47162.1936 0.997324614 0.844708668 1.005640594 0.877364912 0.772606035 0.78940068 0.886009459 0.882320023 0.811623339 1 15.5253432 -5.987310684 24.33283326 0.846980895 0.93922803 0.234188039 0.072803804 230.2963331 441606.8155 0.019718705 0.029224361 1.03E-06 5.987310684 0.092247135 HFVGMLPEKDCR ddPTM_A459_MK2206_30min_R1 2 HFVGMLPEKDCR 12 1 P60981;P60981-2;F6RFD5 P60981 DSTN Destrin 0 ; 87.568 0.022572 30267000 7393.1 8232.4 8187.2 7882.8 8656.8 6588.5 6649 8026.3 5225.7 4013.6 FALSE TRUE 6764.278022 7696.469264 7631.475675 8489.934622 8311.981325 6961.535176 6205.457342 7956.126905 5768.930215 4510.835069 1.499562258 1.706218282 1.691809955 1.882120382 1.842670192 1.543291889 1.375678172 1.76378138 1.278905153 1 12.13917882 -8.662432082 0.655604954 0.988057147 1.709731758 0.654525852 0.154890598 0.614259226 0.579897324 0.166709391 0.065702029 2.18E-09 8.662432082 0.72167461 HFVGYPTNSDFELK ddPTM_A459_MK2206_30min_R1 2 HFVGYPTNSDFELK 14 0 F6XGT7;Q5JVP2;F2Z3J9;Q14914-2;Q14914 F6XGT7 PTGR1 Prostaglandin reductase 1 0 ; 152 0.00054925 18624700 8755.2 9460.3 9061.7 9083.4 9532.4 8493.4 9918.3 9389.2 8383.9 8095.5 FALSE TRUE 8010.524265 8844.432751 8446.617051 9783.005042 9152.704323 8974.288968 9256.668304 9307.111214 9255.436407 9098.431658 0.88042913 0.972083221 0.928359674 1.075240812 1.005965057 0.986355595 1.01739164 1.022935772 1.017256243 1 13.15140217 -4.628743028 0.956484804 1.015073205 0.78820944 0.607641865 0.032144491 1.75527756 1.051450217 0.010628481 0.442442519 2.35E-05 4.628743028 -0.226863765 HFVGYPTNSDFELK ddPTM_A459_MK2206_30min_R2 1 HFVGYPTNSDFELK 14 0 F6XGT7;Q5JVP2;F2Z3J9;Q14914-2;Q14914 F6XGT7 PTGR1 Prostaglandin reductase 1 0 98.592 0.014452 3478300 29508 32844 33297 36623 36669 33322 41574 35005 34566 35654 FALSE TRUE 31767.15517 31213.01472 34407.10536 33630.78375 35229.19081 34590.09206 36115.28386 39580.27369 37572.4882 34490.6129 0.921037711 0.904971298 0.997578833 0.975070633 1.021413882 1.002884239 1.047104729 1.147566551 1.089354031 1 15.07391615 -6.126368974 0.627476304 1.082649578 0.902561327 0.635914782 0.04145198 0.62464201 0.492812292 0.028177671 0.064983239 7.48E-07 6.126368974 -0.180088252 HGAGS(ph)GCLGTMEVK ddPTM_A459_MK2206_30min_R1 2 HGAGSGCLGTMEVK 14 0 Q9BYG5-2;Q9BYG5 Q9BYG5-2 PARD6B Partitioning defective 6 homolog beta 1 HGAGS(0.997)GCLGT(0.003)MEVK;HGAGS(1)GCLGTMEVK 96.707 0.011608 10355000 5283.5 6996.9 6659.7 6696.4 5238.3 4619.8 4802.9 5297 5446.2 5512.5 TRUE FALSE 4834.11058 6541.400538 6207.658119 7212.157888 5029.647419 4881.369084 4482.507304 5250.688887 6012.351979 6195.430117 0.780270375 1.055842841 1.001973713 1.164109312 0.811831838 0.787898337 0.723518338 0.847509985 0.970449487 1 12.59698873 -6.299581142 24.95460636 0.839127503 1.004600466 0.255978387 0.117613952 663.2910777 433962.651 0.036603406 0.041505076 5.02E-07 6.299581142 0.165472963 HGAGS(ph)GCLGTMEVK ddPTM_A459_MK2206_30min_R2 2 HGAGSGCLGTMEVK 14 0 Q9BYG5-2;Q9BYG5 Q9BYG5-2 PARD6B Partitioning defective 6 homolog beta 1 HGAGS(1)GCLGTMEVK;HGAGS(1)GCLGTMEVK 88.951 0.01332 24480000 159595 199257 181348 161243 205820 139654 213999 140184 143779 136288 TRUE FALSE 171813.7159 189362.1871 187394.0518 148068.9311 197738.4726 144968.6308 185900.6742 158506.5301 156284.6375 131840.9337 1.303189465 1.436292825 1.42136472 1.123087701 1.499826094 1.09957224 1.410037604 1.202255822 1.185402994 1 17.00843884 -10.27206657 0.173723715 0.733569962 1.436719702 0.405724116 0.124143794 18.88582934 0.789083798 2.951664884 0.5492055 5.34E-11 10.27206657 0.70314974 HGAPAAPS(ph)PPPR ddPTM_A459_MK2206_30min_R1 3 HGAPAAPSPPPR 12 0 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 HGAPAAPS(1)PPPR;HGAPAAPS(1)PPPR;HGAPAAPS(1)PPPR 103.46 0.010673 20617600 10233.6 10268.1 10708.9 8750.3 10590.2 8883.5 10029.8 9357.4 7984.2 6558.4 TRUE FALSE 9363.178581 9599.644824 9982.009705 9424.249622 10168.36991 9386.476093 9360.730342 9275.589238 8814.186162 7370.904105 1.270289024 1.30237006 1.354244956 1.278574445 1.379528178 1.273449764 1.269956875 1.258405903 1.195808009 1 12.84762587 -8.818979202 0.729031575 0.996998399 1.314608936 0.887994217 0.033027324 0.334207016 0.348114224 0.033284086 0.011971002 1.52E-09 8.818979202 0.317610537 HGAPAAPS(ph)PPPR ddPTM_A459_MK2206_30min_R2 4 HGAPAAPSPPPR 12 0 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 HGAPAAPS(1)PPPR;HGAPAAPS(1)PPPR;HGAPAAPS(1)PPPR;HGAPAAPS(1)PPPR 130.56 0.0021493 21711100 90111 94424 86626 101879 87385 95537 101848 71037 86951 85714 TRUE FALSE 97009.96744 89735.04147 89514.0676 93555.15981 83953.82583 99172.72748 88475.23526 80321.77981 94513.84081 82917.1592 1.169962507 1.082225227 1.079560232 1.128296733 1.012502438 1.19604589 1.067031675 0.968699128 1.139858646 1 16.33938307 -8.018070226 0.013452808 7.51E-06 2.129900748 0.207443934 0.063450633 860.2220643 11.72549704 929.0443284 924.6650186 9.59E-09 8.018070226 2.129893235 HGAPS(ph)PSHPISAPQAAAAAALR ddPTM_A459_MK2206_30min_R1 1 HGAPSPSHPISAPQAAAAAALR 22 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;H0YF36 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 HGAPS(0.937)PS(0.042)HPIS(0.021)APQAAAAAALR 58.191 0.013061 7703000 1244.2 1098.1 1039.5 1016.9 1185.6 1050.9 1198.1 1127.2 925.96 947.15 TRUE FALSE 1138.374256 1026.61349 968.9416362 1095.221814 1138.375041 1110.40105 1118.176935 1117.345009 1022.216856 1064.490093 1.069408033 0.964418079 0.910240164 1.028869899 1.069408771 1.04312953 1.050434328 1.049652803 0.960287806 1 10.05594681 -5.961924611 24.99632645 1.034556206 0.977977185 0.172365868 0.046486455 241.0416423 158241.1845 0.013191379 0.019565943 1.09E-06 5.961924611 -0.056579021 HGAPS(ph)PSHPISAPQAAAAAALR ddPTM_A459_MK2206_30min_R2 2 HGAPSPSHPISAPQAAAAAALR 22 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;H0YF36 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 HGAPS(0.496)PS(0.496)HPIS(0.009)APQAAAAAALR;HGAPS(0.5)PS(0.5)HPIS(0.001)APQAAAAAALR 87.676 0.00027515 11417300 29048 27701 20232 32436 32081 24423 33498 18544.3 24554 16859.6 TRUE FALSE 31271.93721 26325.40862 20906.52478 29785.87504 30821.33875 25352.43438 29099.67236 20968.10368 26689.66254 16309.47263 1.917409466 1.61411771 1.281863936 1.82629296 1.889781444 1.554460708 1.784219086 1.285639588 1.636451597 1 13.99342251 -9.191949761 0.563130174 0.970695381 1.686466978 0.480170941 0.207603307 2.180358066 1.06895547 0.365772943 0.094823651 6.43E-10 9.191949761 0.715771597 HGDGYRHPESSSR ddPTM_A459_MK2206_30min_R2 1 HGDGYRHPESSSR 13 1 Q86XP3-2;Q86XP3 Q86XP3-2 DDX42 ATP-dependent RNA helicase DDX42 0 75.89 0.036821 578970 842.17 1349.6 685.03 2440.8 2371.4 2614.2 2011.7 1673.5 2643.4 3440.3 FALSE TRUE 906.6471827 1282.580827 707.8685583 2241.378832 2278.286921 2713.685213 1747.561374 1892.232196 2873.318154 3328.043293 0.272426499 0.38538586 0.212698122 0.673482475 0.684572501 0.815399613 0.525101755 0.568571989 0.863365618 1 11.70045849 -5.815506547 0.253048029 0.951952298 4.88E-32 0.669536733 0.14060857 4.121509997 0.354758264 0.246507994 1.209971112 1.53E-06 5.815506547 -0.951952298 HGDPGDAAQQEAK ddPTM_A459_MK2206_30min_R2 2 HGDPGDAAQQEAK 13 0 O14737;Q3HM38;X6R2P6;K7ESJ4;O14737-2 O14737 PDCD5 Programmed cell death protein 5 0 ; 125.03 0.0030479 24363000 133864 139179 135549 132179 143781 113016 151987 115025 109237 138640 FALSE TRUE 144112.7308 132267.5732 140068.136 121379.5529 138135.4355 117316.9031 132030.9243 130059.1624 118738.2368 134116.1882 1.074536436 0.986216318 1.044379041 0.905032827 1.029968398 0.87474081 0.984451811 0.969749918 0.885338589 1 17.03312386 -3.941650977 0.584006391 0.947139645 1.318677359 0.321083179 0.053140711 10.53358342 1.312017097 0.024277197 3.286529174 0.00011438 3.941650977 0.371537714 HGECAQTIR ddPTM_A459_MK2206_30min_R2 2 HGECAQTIR 9 0 Q9Y263;E5RIM3 Q9Y263 PLAA Phospholipase A-2-activating protein 0 ; 98.033 0.031587 0 3512.2 5040.4 2798.04 3731.5 6001.2 5363.1 5078.3 5695.8 5475.1 5352.4 FALSE TRUE 3781.096732 4790.101065 2891.325257 3426.624514 5765.562734 5567.196529 4411.51311 6440.260617 5951.314301 5177.751626 0.730258422 0.925131488 0.558413278 0.661797776 1.113526324 1.075215061 0.852013273 1.24383344 1.149401271 1 12.33811005 -6.263467607 24.99965494 1.073651503 0.722167682 0.648366307 0.12749911 121.3689571 1495975.885 0.040524372 0.04827173 5.45E-07 6.263467607 -0.351483821 HGENEHNLQGR ddPTM_A459_MK2206_30min_R2 4 HGENEHNLQGR 11 0 Q5W015;Q5VX20;A0A1W2PR17;Q16875-3;Q16875-2;Q16875;Q16875-4;F2Z2I2 Q5W015 PFKFB3 "6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase" 0 ;;; 128.51 0.0015577 4275680 12178.67 15025.31 11997.31 15011.09 13412.61 11570.46 13803.97 14317.79 13274.2 11654.82 FALSE TRUE 13111.07834 14279.17495 12397.29433 13784.63593 12885.96354 12010.78196 11991.49216 16189.17431 14428.76592 11274.52418 1.162894161 1.26649912 1.099584704 1.222635715 1.142927483 1.065302781 1.063591861 1.435907543 1.279767172 1 13.46077893 -7.732076324 24.99989615 1.268378644 1.148740695 0.100244599 0.116795981 338.0900521 287852.2855 0.053519454 0.030893387 1.85E-08 7.732076324 -0.11963795 HGESAWNLENR ddPTM_A459_MK2206_30min_R1 3 HGESAWNLENR 11 0 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 0 ;; 208.17 2.54E-05 84282000 17292.2 15819.8 18155 15137.1 21201.7 19356.3 21589.1 20977.2 16290.8 16924.7 FALSE TRUE 15821.40759 14789.92814 16922.68918 16302.96206 20357.19139 20452.23698 20148.93053 20793.79855 17984.28696 19021.45961 0.831766221 0.777539077 0.889663019 0.8570826 1.07022236 1.075219116 1.059273628 1.093175759 0.945473551 1 14.21534034 -6.216871532 5.15844941 1.048098233 0.835665605 0.809792046 0.047795691 0.083451098 5.41892319 0.014413948 0.018445797 6.07E-07 6.216871532 -0.212432627 HGESAWNLENR ddPTM_A459_MK2206_30min_R2 4 HGESAWNLENR 11 0 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 0 ;;; 184.36 3.60E-05 104246000 160086 213757 238399 235874 248685 219163 233885 195842 238342 208063 FALSE TRUE 172342.3072 203142.1382 246347.1037 216602.3397 238920.3774 227503.4015 203175.6186 221439.2218 259072.5563 201273.9213 0.856257513 1.009281962 1.223939505 1.076157001 1.187040903 1.130317331 1.009448304 1.100188342 1.287164053 1 17.61880073 -4.932506634 3.47478074 1.126736709 0.857808143 0.493599738 0.085349683 0.203745241 4.595124667 0.021252674 0.116890253 1.17E-05 4.932506634 -0.268928566 HGGICDCQTSR ddPTM_A459_MK2206_30min_R2 2 HGGICDCQTSR 11 0 Q10713 Q10713 PMPCA Mitochondrial-processing peptidase subunit alpha 0 ; 96.229 0.029568 282760 3093.33 2243.7 2071.29 2005.5 2773.68 1876.44 3306.76 527.7 3727.8 2102.99 FALSE TRUE 3330.157723 2132.281121 2140.345775 1841.644235 2664.771387 1947.849239 2872.57844 596.6722019 4052.037306 2034.369609 1.636948227 1.048128674 1.052092877 0.90526531 1.309875735 0.957470673 1.412023866 0.293295869 1.991790129 1 10.9903661 -4.758836802 24.76874904 1.088745404 1.636949041 0.13009674 0.407848532 119.7676126 1139569.21 0.091214851 0.60467921 1.74E-05 4.758836802 0.548203637 HGGNVSLDVLPVKGPQGS(ph)PLLSR ddPTM_A459_MK2206_30min_R2 1 HGGNVSLDVLPVKGPQGSPLLSR 23 1 Q8TEP8-1;H0Y966;A0A0A0MR42;K7ENP4;Q8TEP8;K7EPA2 Q8TEP8-1 CEP192 Centrosomal protein of 192 kDa 1 HGGNVSLDVLPVKGPQGS(0.879)PLLS(0.121)R 77.668 0.00032425 2538600 7746.3 17702 12296 21807 22010 20717 17480 10937 24606 12761 TRUE FALSE 8339.362684 16822.94442 12705.9425 20025.29834 21145.77681 21505.39995 15184.855 12366.50345 26746.1854 12344.60962 0.675546894 1.362776543 1.029270499 1.622189682 1.7129563 1.742088298 1.230079806 1.001773554 2.166628694 1 13.59159359 -4.508271691 1.095458846 1.481878502 1.75E-13 0.281749034 0.363764058 3.852036471 2.579160735 0.111791327 7.624866567 3.10E-05 4.508271691 -1.481878502 HGGPGPGGPEPELS(ph)PITEGSEAR ddPTM_A459_MK2206_30min_R1 1 HGGPGPGGPEPELSPITEGSEAR 23 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 HGGPGPGGPEPELS(0.934)PIT(0.059)EGS(0.007)EAR 152.03 3.39E-08 3763800 1016.2 843.91 875.44 867.49 1011 880.03 1133.4 917.42 729.62 894.8 TRUE FALSE 929.7668537 788.9713056 816.0175719 934.3042301 970.7297292 929.8565381 1057.792954 909.3990937 805.46661 1005.654579 0.924538975 0.78453509 0.811429281 0.929050838 0.965271525 0.924628155 1.051845212 0.904285738 0.800937644 1 9.97391914 -5.815632712 6.553170879 0.94119208 0.834740647 0.297104406 0.069866997 0.239899642 21.78175463 0.020125545 0.03039978 1.53E-06 5.815632712 -0.106451434 HGGPGPGGPEPELS(ph)PITEGSEAR ddPTM_A459_MK2206_30min_R2 2 HGGPGPGGPEPELSPITEGSEAR 23 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 HGGPGPGGPEPELS(0.97)PIT(0.027)EGS(0.003)EAR;HGGPGPGGPEPELS(0.927)PIT(0.066)EGS(0.007)EAR 204 1.86E-23 11174100 38992 46746 42441 47551 46722 37899 41348 34293 32070 22778 TRUE FALSE 41977.2575 44424.66162 43855.96176 43665.93119 44887.45952 39341.273 35918.95793 38775.21285 34859.39063 22034.75573 1.905047554 2.016117726 1.990308506 1.981684378 2.037120814 1.785419067 1.630104657 1.759729644 1.582018474 1 14.42749328 -8.95375627 0.369299355 0.889098482 2.033554168 0.931913494 0.077916059 0.594518039 0.167369957 0.208958424 0.073642664 1.11E-09 8.95375627 1.144455686 HGGS(ph)PQPLAT(ph)TPLSQEPVNPPS(ph)EASPTR ddPTM_A459_MK2206_30min_R2 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 HGGS(0.997)PQPLAT(0.728)T(0.275)PLSQEPVNPPS(0.511)EAS(0.284)PT(0.205)R 97.613 2.53E-06 15279000 8969.6 12107 11089 10472 11529 9337.3 11687 8857 9771.4 5306.2 TRUE FALSE 9656.319472 11505.78399 11458.70173 9616.404102 11076.31353 9692.637494 10152.48286 10014.64031 10621.29871 5133.059129 1.881201683 2.241506224 2.232333865 1.873425546 2.157838679 1.888277 1.977862052 1.951008173 2.069194693 1 12.32560316 -11.46893407 0.410284484 6.31E-14 2.066816699 0.840397706 0.134568188 16.79270295 1.106515004 16.18281604 0.081882605 3.40E-12 11.46893407 2.066816699 HGGS(ph)PQPLAT(ph)TPLSQEPVNPPSEAS(ph)PTR ddPTM_A459_MK2206_30min_R2 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 HGGS(1)PQPLAT(0.792)T(0.208)PLSQEPVNPPS(0.078)EAS(0.877)PT(0.044)R 121.76 9.44E-12 13681000 15101 14647 14120 15859 13322 11225 17188 10671 11067 8659.2 TRUE FALSE 16257.14417 13919.65128 14590.75375 14563.26897 12798.91134 11652.17524 14931.19495 12065.73634 12029.58766 8376.651013 1.940768948 1.661720329 1.741836174 1.738555056 1.527927011 1.391030284 1.782477858 1.440400981 1.436085571 1 13.03215785 -11.09656556 0.10489706 4.32E-14 2.172069442 0.768341848 0.121975763 31.40689114 0.534044783 10.53864773 2.434792426 8.01E-12 11.09656556 2.172069442 HGGS(ph)PQPLATT(ph)PLSQEPVNPPS(ph)EASPTR ddPTM_A459_MK2206_30min_R2 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 HGGS(0.983)PQPLAT(0.187)T(0.817)PLS(0.014)QEPVNPPS(0.872)EAS(0.094)PT(0.034)R 79.29 0.00017561 4684900 5882.9 6642.2 5130.1 5761.2 4017.9 6194.7 6187.8 5921.2 6077.8 5046 TRUE FALSE 6333.299347 6312.358007 5301.134974 5290.491531 3860.137058 6430.443649 5375.334427 6695.121171 6606.436058 4881.349433 1.297448469 1.293158397 1.085997847 1.083817416 0.79079302 1.317349585 1.101198449 1.371571788 1.353403633 1 12.25306432 HGGS(ph)PQPLATTPLS(ph)QEPVNPPSEAS(ph)PTR ddPTM_A459_MK2206_30min_R1 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 HGGS(0.981)PQPLAT(0.429)T(0.155)PLS(0.436)QEPVNPPS(0.193)EAS(0.485)PT(0.321)R 71.969 0.00082931 3186300 210.5 444.74 463.35 329.16 334.7 328.49 448.79 367.67 285.98 606.37 TRUE FALSE 192.5958696 415.7873452 431.899093 354.5119602 321.3681903 347.0888199 418.852038 364.4555 315.7086444 681.4916935 0.282609269 0.610113592 0.633755477 0.520199973 0.471565821 0.509307484 0.614610628 0.534790818 0.463261178 1 9.412552262 -11.01886405 3.315024453 1.010152258 0.523970191 0.69427387 0.096292459 212172693.8 296969186.4 19951392.21 0.023674845 9.57E-12 11.01886405 -0.486182066 HGGS(ph)PQPLATTPLSQEPVNPPS(ph)EASPTR ddPTM_A459_MK2206_30min_R2 4 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 HGGS(1)PQPLATTPLSQEPVNPPS(0.535)EAS(0.264)PT(0.201)R;HGGS(0.926)PQPLAT(0.034)T(0.037)PLS(0.004)QEPVNPPS(0.469)EAS(0.266)PT(0.266)R;HGGS(0.999)PQPLAT(0.001)TPLSQEPVNPPS(0.397)EAS(0.351)PT(0.252)R;HGGS(0.999)PQPLAT(0.002)T(0.003)PLS(0.005)QEPVNPPS(0.51)EAS(0.368)PT(0.112)R 100.58 2.40E-06 282937200 60293.2 69724.5 46908 61514.7 56113 61120.3 68256.8 53142.3 44601.7 54955.9 TRUE FALSE 64909.29375 66262.08272 48471.88931 56488.75223 53909.72167 63446.27585 59294.60017 60088.18107 48481.07524 53162.69348 1.220955702 1.24640191 0.911765114 1.062563774 1.014051737 1.193436067 1.115342288 1.13026969 0.911937904 1 15.69812658 -5.229195233 24.91847556 1.054777252 1.233678905 0.434799568 0.086309073 631.0670951 487690.584 0.022294726 0.058977653 5.90E-06 5.229195233 0.178901653 HGGS(ph)PQPLATTPLSQEPVNPPSEAS(ph)PTR ddPTM_A459_MK2206_30min_R1 3 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 HGGS(0.999)PQPLAT(0.001)TPLSQEPVNPPS(0.062)EAS(0.57)PT(0.367)R;HGGS(0.999)PQPLAT(0.001)TPLSQEPVNPPS(0.127)EAS(0.698)PT(0.175)R;HGGS(1)PQPLATTPLSQEPVNPPS(0.145)EAS(0.503)PT(0.352)R 158.38 1.11E-16 168470000 6069.55 6344.5 5391.35 4118.81 4861.21 4703.71 5918.15 4899.22 6125.92 6449.1 TRUE FALSE 5553.3029 5931.471897 5025.400183 4436.04146 4667.577712 4970.029995 5523.361012 4856.386636 6762.731306 7248.063196 0.766177495 0.818352674 0.69334387 0.612031289 0.643975857 0.685704561 0.762046475 0.670025427 0.933039782 1 12.82337982 -8.361162719 4.022727951 0.994995119 0.705582875 0.758799656 0.059012567 0.117808223 3.170487407 0.062818713 0.016669985 4.35E-09 8.361162719 -0.289412244 HGGS(ph)PQPLATTPLSQEPVNPPSEAS(ph)PTR ddPTM_A459_MK2206_30min_R2 2 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 HGGS(0.999)PQPLAT(0.001)TPLSQEPVNPPS(0.145)EAS(0.506)PT(0.35)R;HGGS(0.991)PQPLAT(0.004)T(0.005)PLSQEPVNPPS(0.301)EAS(0.399)PT(0.3)R 116.22 1.68E-11 313885000 41602 51945 43093 51637 44970 38862 40505 39746 33401 33774 TRUE FALSE 44787.08111 49365.48684 44529.69911 47418.09192 43204.25184 40340.92064 35186.64484 44940.93867 36306.1586 32671.95715 1.370811088 1.51094367 1.362933323 1.451339193 1.322364977 1.234726174 1.07696777 1.37552025 1.11123305 1 14.99576526 -6.658048796 2.021100013 1.169968492 1.426846837 0.613585041 0.100013944 0.229342916 1.920488614 0.037017574 0.036501613 2.20E-07 6.658048796 0.256878345 HGGS(ph)PQPLATTPLSQEPVNPPSEAS(ph)PTRDR ddPTM_A459_MK2206_30min_R2 1 HGGSPQPLATTPLSQEPVNPPSEASPTRDR 30 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 HGGS(0.991)PQPLAT(0.002)T(0.005)PLS(0.003)QEPVNPPS(0.046)EAS(0.728)PT(0.225)RDR 60.936 0.0044563 4942500 10664 12582 11559 12125 13640 12699 10524 9353.6 11068 8356.5 TRUE FALSE 11480.44404 11957.19618 11944.37129 11134.34871 13104.42506 13182.26934 9142.186158 10576.14764 12030.67463 8083.828089 1.420174194 1.47915023 1.477563743 1.377360898 1.621066767 1.630696398 1.130922882 1.308309321 1.488239792 1 12.98082293 -10.12798067 0.324305776 0.831309428 1.49208219 0.493091671 0.135732617 8.738603872 0.914838903 1.692809462 0.141377788 7.45E-11 10.12798067 0.660772762 HGGS(ph)PQPLATTPLSQEPVNPPSEASPT(ph)R ddPTM_A459_MK2206_30min_R1 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 HGGS(1)PQPLATTPLSQEPVNPPS(0.021)EAS(0.275)PT(0.703)R 130.15 9.99E-12 127550000 1894.2 2317.6 2292.3 1709.5 2271.5 2061.8 2462 1842.1 2410.8 2891.3 TRUE FALSE 1733.088343 2166.723819 2136.705063 1841.165986 2181.021345 2178.537334 2297.764472 1825.994714 2661.411287 3249.496072 0.533340649 0.66678764 0.657549668 0.566600465 0.671187562 0.670423132 0.707114094 0.561931658 0.819022774 1 11.66600029 -8.516651232 3.75945179 0.999299136 0.635587699 0.823056691 0.055059351 0.073068045 2.822161464 0.051782539 0.01361599 3.04E-09 8.516651232 -0.363711437 HGGS(ph)PQPLATTPLSQEPVNPPSEASPT(ph)R ddPTM_A459_MK2206_30min_R2 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 HGGS(0.999)PQPLAT(0.001)T(0.001)PLSQEPVNPPS(0.328)EAS(0.201)PT(0.471)R 94.745 4.83E-06 7693500 12014 11207 11781 13444 12816 10967 13949 13461 9568.2 9490.5 TRUE FALSE 12933.80108 10650.47668 12173.77266 12345.58219 12312.77944 11384.35687 12117.47954 15220.39892 10400.42474 9180.825762 1.408784069 1.160078293 1.325999749 1.344713702 1.341140739 1.240014479 1.319868153 1.657846398 1.13284197 1 13.16440821 -8.514934526 24.60088197 0.999999948 1.341182514 0.479219291 0.121892159 327.7889507 1015063.594 0.117266337 0.030278038 3.06E-09 8.514934526 0.341182566 HGGS(ph)PQPLATTPLSQEPVNPPSEASPTR ddPTM_A459_MK2206_30min_R2 2 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HGGS(0.995)PQPLAT(0.004)T(0.001)PLSQEPVNPPSEASPTR;HGGS(0.986)PQPLAT(0.008)T(0.006)PLSQEPVNPPSEASPTR 111.5 2.83E-10 20481000 20752.1 37134 25944 29901 25921 33470 36637 23513 24621 22264 TRUE FALSE 22340.89673 35289.97956 26808.96001 27457.99265 24903.2113 34743.7243 31826.51789 26586.22983 26762.49008 21537.5275 1.037300903 1.638534393 1.244755695 1.27489066 1.156270667 1.613171442 1.477723842 1.234414202 1.242598068 1 14.39456502 -8.616510555 1.5946437 1.003693467 1.351255159 0.237764228 0.182001324 0.709007605 3.866166003 0.170690615 0.049402319 2.42E-09 8.616510555 0.347561692 HGGSDNASTDCER ddPTM_A459_MK2206_30min_R2 2 HGGSDNASTDCER 13 0 F5H7V1;O43847;O43847-2;G3V1R5 F5H7V1 NRD1 Nardilysin 0 ; 137.09 0.0014884 1899910 3827.2 563.68 2755.05 2824.59 4039.8 3406.9 4236.9 10355.7 6761.3 3436.1 FALSE TRUE 4120.213375 535.6884709 2846.901992 2593.811962 3881.177154 3536.551967 3680.589941 11709.22555 7349.385652 3323.980338 1.239542042 0.161158736 0.856473776 0.780333124 1.167629396 1.063950928 1.107283908 3.522651867 2.211019592 1 11.69869613 -7.607712769 8.719821856 2.396608364 0.872513115 0.479433335 0.634623012 0.202848461 18.71113537 0.285583748 0.164353652 2.47E-08 7.607712769 -1.524095249 HGGSPQPLATTPLSQEPVNPPS(ph)EASPTR ddPTM_A459_MK2206_30min_R1 4 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HGGSPQPLATTPLSQEPVNPPS(0.436)EAS(0.419)PT(0.145)R;HGGSPQPLATTPLSQEPVNPPS(0.623)EAS(0.353)PT(0.024)R;HGGSPQPLATTPLSQEPVNPPS(0.751)EAS(0.142)PT(0.107)R;HGGSPQPLAT(0.003)T(0.002)PLS(0.001)QEPVNPPS(0.615)EAS(0.258)PT(0.121)R 228.72 3.35E-49 91001000 6561.4 5440.23 5573.86 4367.2 6412.59 6205.28 7502.32 5400.33 5906.55 6942.53 TRUE FALSE 6003.318475 5086.070038 5195.521913 4703.562501 6157.162961 6556.617591 7001.853922 5353.115484 6520.557009 7802.62303 0.769397477 0.651841056 0.665868631 0.602818114 0.789114499 0.840309415 0.897371806 0.686066143 0.835687817 1 12.92974349 -6.439829468 4.989129231 0.833439795 0.671214026 0.505277918 0.08274606 0.201309971 8.647696086 0.025806709 0.029029923 3.63E-07 6.439829468 -0.162225768 HGGSPQPLATTPLSQEPVNPPS(ph)EASPTR ddPTM_A459_MK2206_30min_R2 2 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HGGSPQPLATTPLSQEPVNPPS(0.893)EAS(0.099)PT(0.007)R;HGGSPQPLATTPLSQEPVNPPS(0.586)EAS(0.383)PT(0.031)R 187.7 1.37E-32 75877000 51945.9 52330 49739.3 64204 58195.8 57374.4 61588 52681 48902 53275.2 TRUE FALSE 55922.91804 49731.36829 51397.58344 58958.32782 55910.74048 59557.823 53501.42162 59566.58758 53155.40757 51536.83459 1.085105798 0.964967459 0.997298027 1.144003668 1.08486951 1.155636031 1.038120056 1.155806096 1.031406139 1 15.65331631 -5.745304726 24.99837658 1.094331511 1.010708101 0.23194386 0.058240063 285.3510701 442107.6193 0.014675355 0.025314429 1.80E-06 5.745304726 -0.08362341 HGGSPQPLATTPLSQEPVNPPSEAS(ph)PTR ddPTM_A459_MK2206_30min_R1 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HGGSPQPLATTPLSQEPVNPPS(0.34)EAS(0.545)PT(0.115)R 145.61 4.05E-14 46742000 2493.1 1854.2 2117.2 1580.9 2127.9 2411 2710.9 1732.6 2562 2323 TRUE FALSE 2281.048753 1733.491243 1973.490363 1702.661192 2043.141237 2547.508736 2530.060807 1717.452061 2828.329068 2610.790778 0.873700326 0.66397172 0.755897554 0.652163018 0.78257563 0.975761351 0.969078345 0.657828301 1.083322759 1 11.35027113 -6.613994602 5.347094793 0.91684668 0.730886473 0.394141001 0.118260831 0.228569417 10.5444728 0.038252197 0.038234712 2.43E-07 6.613994602 -0.185960207 HGGSPQPLATTPLSQEPVNPPSEAS(ph)PTR ddPTM_A459_MK2206_30min_R2 3 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HGGSPQPLATTPLSQEPVNPPS(0.256)EAS(0.616)PT(0.128)R;HGGSPQPLATTPLSQEPVNPPS(0.222)EAS(0.651)PT(0.127)R;HGGSPQPLATTPLSQEPVNPPS(0.312)EAS(0.344)PT(0.344)R 187.74 1.36E-32 171247000 99130 106971 101017 108262 106044 105858 120963 92789 89972 106686 TRUE FALSE 106719.469 101658.9757 104384.8564 99416.64829 101880.1797 109886.5004 105080.4128 104916.8409 97797.60193 103204.8446 1.03405484 0.985021354 1.011433686 0.963294395 0.987164703 1.064741688 1.018173258 1.016588333 0.947606698 1 16.65515117 -4.741692456 24.13755925 1.00135839 1.034055011 0.099909022 0.030727776 2529.616776 3091814.363 0.007919494 0.290964989 1.81E-05 4.741692456 0.032696621 HGGVCAPAAVAT(ph)SPPGAIPK ddPTM_A459_MK2206_30min_R2 2 HGGVCAPAAVATSPPGAIPK 20 0 A0A494BZT8;Q9Y6A5;E7EMT0 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 HGGVCAPAAVAT(0.547)S(0.453)PPGAIPK;HGGVCAPAAVAT(0.518)S(0.482)PPGAIPK 69.398 0.016514 78606000 920509 1073025 891767 1008439 932261 836321 1098352 829073 813751 1077473 TRUE FALSE 990983.8768 1019740.139 921498.0667 926046.3079 895655.7489 868147.7817 954137.063 937435.6877 884529.5911 1042315.144 0.950752642 0.978341478 0.884087765 0.88845136 0.859294575 0.832903356 0.915401708 0.899378363 0.848620109 1 19.99136011 -5.267237079 24.48541019 0.884994321 0.964547063 0.300641872 0.044100103 335.9265342 1418725.719 0.010887725 0.023698324 5.40E-06 5.267237079 0.079552742 HGGVCAPAAVATS(ph)PPGAIPK ddPTM_A459_MK2206_30min_R1 2 HGGVCAPAAVATSPPGAIPK 20 0 A0A494BZT8;Q9Y6A5;E7EMT0 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 HGGVCAPAAVAT(0.098)S(0.902)PPGAIPK;HGGVCAPAAVAT(0.411)S(0.589)PPGAIPK 179.74 2.84E-13 23372600 9553.2 8986.1 9471.1 8569.5 8473.8 7080.1 7646.4 7432.4 8153.2 7482.1 TRUE FALSE 8740.650174 8401.103257 8828.22812 9229.524375 8136.270602 7480.969143 7136.322608 7367.41931 9000.754317 8409.039035 1.039435081 0.99905628 1.04984982 1.097571832 0.967562473 0.889634251 0.848649005 0.876130944 1.070366576 1 13.03772523 -6.481003595 5.824997117 0.923944265 1.042790788 0.386170129 0.064311674 0.200324162 17.81850329 0.020891071 0.023163743 3.30E-07 6.481003595 0.118846523 HGGVCAPAAVATS(ph)PPGAIPK ddPTM_A459_MK2206_30min_R2 4 HGGVCAPAAVATSPPGAIPK 20 0 A0A494BZT8;Q9Y6A5;E7EMT0 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 HGGVCAPAAVAT(0.088)S(0.912)PPGAIPK;HGGVCAPAAVAT(0.022)S(0.978)PPGAIPK;HGGVCAPAAVAT(0.418)S(0.582)PPGAIPK;HGGVCAPAAVAT(0.084)S(0.916)PPGAIPK 216.72 2.48E-19 62733000 547775 555703 520042 619154 625728 560098 794178 415378 555677 641359 TRUE FALSE 589713.0752 528107.5971 537379.9407 568567.1376 601158.7747 581412.9219 689901.4746 469669.3308 604008.781 620431.5084 0.950488599 0.851194032 0.866139023 0.916405969 0.968936565 0.937110566 1.111970403 0.757004318 0.973530153 1 19.24291243 -6.021010197 4.56424247 0.952230495 0.885751993 0.11581084 0.085246526 0.464214274 24.27169839 0.024962897 0.034821563 9.53E-07 6.021010197 -0.066478502 HGHVWLQEAVRGPNAG ddPTM_A459_MK2206_30min_R1 1 HGHVWLQEAVRGPNAG 16 1 M0R3C8 M0R3C8 PNKP 0 101.3 0.015636 11289000 4706.1 4439.1 4561 3827.1 4230.9 3930.4 4069.7 4124.8 3347.4 3633.5 FALSE TRUE 4305.821482 4150.113783 4251.412028 4121.863905 4062.374294 4152.935851 3798.217739 4088.737308 3695.374209 4083.645412 1.054406308 1.016276725 1.041082562 1.009358916 0.994791145 1.016967791 0.930104687 1.0012469 0.904920442 1 11.99564189 -6.652226559 0.853104091 0.958001768 1.03700119 0.484995857 0.031402112 0.497454692 0.796414419 0.017953925 0.018976316 2.23E-07 6.652226559 0.078999422 HGIVEDWDLMER ddPTM_A459_MK2206_30min_R1 2 HGIVEDWDLMER 12 0 F8WDR7;B4DXW1;P61158 F8WDR7 ACTR3 Actin-related protein 3 0 ; 187.78 0.00016732 13300000 5543.1 5689.3 5808 4487.9 5687.5 5970.6 5880 4933.2 4968.5 4203.7 FALSE TRUE 5071.630237 5318.925536 5413.769142 4833.558836 5460.954832 6308.650212 5487.755929 4890.069553 5484.993355 4724.486092 1.073477652 1.125820974 1.145895879 1.023086689 1.155883354 1.335309299 1.161556161 1.03504793 1.160971426 1 12.20594169 -9.344565457 0.96646806 0.999276965 1.139033721 0.189040805 0.082976195 8.40953313 8.36914109 0.109105374 0.027709767 4.52E-10 9.344565457 0.139756756 HGIVEDWDLMER ddPTM_A459_MK2206_30min_R2 2 HGIVEDWDLMER 12 0 F8WDR7;B4DXW1;P61158 F8WDR7 ACTR3 Actin-related protein 3 0 ; 163.46 5.94E-05 3219500 21969 25801 22868 29378 30398 26211 25774 24600 23325 22383 FALSE TRUE 23650.96353 24519.75986 23630.40771 26977.72342 29204.42178 27208.47797 22389.84284 27815.30446 25353.76634 21652.64454 1.092289835 1.132414094 1.09134049 1.245932032 1.34876928 1.256589139 1.034046571 1.284614653 1.170931629 1 14.40225562 -5.753093837 24.99524394 1.206111233 1.108054713 0.118301856 0.102515755 350.7967492 1050638.575 0.027905807 0.047321187 1.77E-06 5.753093837 -0.09805652 HGLAHDEMKS(ph)PR ddPTM_A459_MK2206_30min_R2 1 HGLAHDEMKSPR 12 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 HGLAHDEMKS(1)PR 63.181 0.036598 27805000 47702 52071 57264 48589 45177 41101 59637 43906 40257 22444 TRUE FALSE 51354.1018 49485.22986 59173.15318 44619.12327 43403.12398 42665.12736 51806.59026 49644.66495 43758.48109 21711.65412 2.365278183 2.27920128 2.72540972 2.055077104 1.999070349 1.965079543 2.386118993 2.286544576 2.015437463 1 14.40618202 -11.20566776 0.336370091 2.51E-14 2.319063904 0.761311185 0.210547982 14.32774351 0.873053971 12.09200849 0.19603089 6.23E-12 11.20566776 2.319063904 HGLEVIYMIEPIDEYCVQQLK ddPTM_A459_MK2206_30min_R1 1 HGLEVIYMIEPIDEYCVQQLK 21 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 129.12 8.02E-05 6552500 2076.2 2203.2 2485.5 2556.3 2107.9 2128.1 2262.7 2232.1 1512.9 1860.5 FALSE TRUE 1899.608287 2059.77128 2316.791185 2753.186669 2023.937879 2248.591183 2111.759412 2212.584985 1670.171369 2090.992786 0.908471947 0.985068573 1.107986216 1.316688746 0.967931546 1.075370129 1.009931467 1.058150463 0.798745639 1 11.02997237 -8.233401597 23.19138214 0.899372872 1.058392506 0.228455373 0.11318157 376.470782 311398.2121 0.078800722 0.029762439 5.84E-09 8.233401597 0.159019634 HGLLLPAS(ph)PVR ddPTM_A459_MK2206_30min_R1 1 HGLLLPASPVR 11 0 Q96E09 Q96E09 FAM122A Protein FAM122A 1 HGLLLPAS(1)PVR 74.853 0.035975 30191000 7547.5 6986.1 6148.5 5709.3 6546.7 6404.3 6123.5 5986 5662.2 5018.4 TRUE FALSE 6905.545491 6531.30362 5731.156951 6149.031275 6285.931076 6766.905932 5715.012488 5933.665033 6250.805952 5640.117279 1.224362039 1.158008477 1.01614145 1.090231102 1.114503611 1.199781068 1.013279016 1.052046392 1.108275882 1 12.46150945 -5.019394585 4.838012118 1.08039863 1.212937587 0.420759548 0.056933122 0.169427612 10.97557532 0.014804182 0.050578204 9.56E-06 5.019394585 0.132538957 HGLLLPAS(ph)PVR ddPTM_A459_MK2206_30min_R2 4 HGLLLPASPVR 11 0 Q96E09 Q96E09 FAM122A Protein FAM122A 1 HGLLLPAS(1)PVR;HGLLLPAS(1)PVR;HGLLLPAS(1)PVR;HGLLLPAS(1)PVR 132.79 0.0019443 76319000 481606 534437 481723 589744 549078 539273 577474 488370 506874 529920 TRUE FALSE 518478.1257 507897.6357 497783.4044 541560.0287 527518.4388 559795.4119 501650.9701 552201.6358 550960.9843 512628.7538 1.011410542 0.990770869 0.97104074 1.05643709 1.029045747 1.092009388 0.978585314 1.077195986 1.07477581 1 18.96755488 -5.767481395 24.99997654 1.045874356 0.991043729 0.332055108 0.034331952 153.1192454 633564.0967 0.009312205 0.01422522 1.71E-06 5.767481395 -0.054830627 HGLQLGAQS(ph)PGR ddPTM_A459_MK2206_30min_R1 2 HGLQLGAQSPGR 12 0 Q8N1G0;A6PVV7 Q8N1G0 ZNF687 Zinc finger protein 687 1 HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR 115.04 0.003542 57940000 8540.6 8792.4 8302.4 7546.9 8804.3 8119.8 9333.4 7345.5 8231.8 7768.9 TRUE FALSE 7814.177122 8220.013162 7738.85622 8128.163546 8453.606088 8579.536059 8710.785916 7281.279068 9087.525068 8731.369984 0.894954301 0.941434526 0.886327831 0.930915029 0.968187822 0.982610527 0.997642516 0.833921719 1.040790287 1 13.09199232 -6.093310496 3.947319447 0.963981141 0.91053976 0.223804435 0.052381027 0.410078478 11.54002416 0.01534783 0.020665469 8.07E-07 6.093310496 -0.053441381 HGLQLGAQS(ph)PGR ddPTM_A459_MK2206_30min_R2 3 HGLQLGAQSPGR 12 0 Q8N1G0;A6PVV7 Q8N1G0 ZNF687 Zinc finger protein 687 1 HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR 96.489 0.011293 117833000 751770 865940 719850 899880 803030 835290 918360 704510 627090 725580 TRUE FALSE 809326.0892 822938.6788 743849.4397 826356.9254 771499.0073 867077.5463 797778.2289 796591.8759 681633.1547 701904.384 1.153043217 1.172437012 1.059758931 1.177306973 1.099151145 1.235321457 1.136591033 1.134900841 0.971119671 1 19.42091499 -8.237666676 6.594999908 0.98500317 1.146540323 0.673914297 0.044667703 0.088669027 16.27586201 0.031920902 0.011087146 5.79E-09 8.237666676 0.161537153 HGLTSGSAS(ph)PPPPALPLYPDPVR ddPTM_A459_MK2206_30min_R1 1 HGLTSGSASPPPPALPLYPDPVR 23 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 HGLT(0.003)S(0.01)GS(0.03)AS(0.957)PPPPALPLYPDPVR 93.546 6.76E-05 31429000 2114.8 1807.8 1759.6 1816.3 2659.6 2248.3 2234.7 2044.9 1810.4 1593.6 TRUE FALSE 1934.925155 1690.111891 1640.163255 1956.191741 2553.6625 2375.596803 2085.62724 2027.021655 1998.597559 1791.027199 1.080343814 0.943655067 0.915766804 1.092217774 1.425808889 1.326387899 1.164486637 1.131764864 1.115894588 1 10.80657153 -6.001470027 18.2217009 1.21062258 0.980909192 0.399003523 0.117007576 1.696087603 21052.54643 0.034848866 0.050339141 9.97E-07 6.001470027 -0.229713388 HGLTSGSAS(ph)PPPPALPLYPDPVR ddPTM_A459_MK2206_30min_R2 3 HGLTSGSASPPPPALPLYPDPVR 23 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 HGLT(0.023)S(0.059)GS(0.159)AS(0.759)PPPPALPLYPDPVR;HGLT(0.001)S(0.004)GS(0.012)AS(0.982)PPPPALPLYPDPVR;HGLT(0.008)S(0.014)GS(0.051)AS(0.928)PPPPALPLYPDPVR 103.36 1.95E-05 66787800 64006 101889 84416 138915 133471 120404 129152 109190 117844 94896 TRUE FALSE 68906.34857 96829.34042 87230.38731 127565.2001 128230.2579 124986.0586 112194.1873 123461.5079 128093.8581 91799.55129 0.750617488 1.054790999 0.950226729 1.389605922 1.396850596 1.361510561 1.222164876 1.344903174 1.395364752 1 16.48619948 -5.753090783 24.26863557 1.319026206 0.932169429 0.630579285 0.133724838 76.7014223 222960.6558 0.034597532 0.058613716 1.77E-06 5.753090783 -0.386856777 HGLYEK ddPTM_A459_MK2206_30min_R2 1 HGLYEK 6 0 A0A2R8Y8A0;E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4 A0A2R8Y8A0 RPS24 40S ribosomal protein S24 0 100.27 0.045076 2132900 71667 38377 55072 41581 58648 46658 54726 202880 134420 72725 FALSE TRUE 77153.88062 36471.25399 56908.07299 38183.69929 56345.18484 48433.60288 47540.41046 229397.1126 146111.6086 70351.98921 1.096683711 0.518411127 0.80890496 0.542752234 0.800903933 0.688446815 0.675750764 3.260705421 2.076865349 1 16.1023036 -7.735698168 24.99829628 2.251588973 0.721344844 0.580370995 0.53351991 123.9915673 120413.2069 0.232994766 0.134459889 1.84E-08 7.735698168 -1.530244129 HGLYLPTR ddPTM_A459_MK2206_30min_R2 1 HGLYLPTR 8 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 0 91.069 0.046137 0 11276 14107 11774 15252 16950 15265 14883 10172 13220 12473 FALSE TRUE 12139.29923 13406.46689 12166.53928 14005.86281 16284.45783 15845.92027 12928.84422 11501.51533 14369.8517 12066.00703 1.006074271 1.111093907 1.008331858 1.160770317 1.349614482 1.313269604 1.071509754 0.953216362 1.190936792 1 13.55866071 -7.501003794 24.68116878 1.045718535 1.160918889 0.158618737 0.118445833 1283.373899 1448016.78 0.054893294 0.036618123 3.15E-08 7.501003794 0.115200354 HGQEEAAQS(ph)PYR ddPTM_A459_MK2206_30min_R1 1 HGQEEAAQSPYR 12 0 J3KQ72;Q9NRD1 J3KQ72 FBXO6 F-box only protein 6 1 HGQEEAAQS(1)PYR 198.81 0.00012047 4561400 1116.1 764.51 895.04 1021.7 1162.7 1073 1006.5 1057.8 901.64 932.98 TRUE FALSE 1021.169834 714.74026 834.2871785 1100.391511 1116.387197 1133.752333 939.3582215 1048.551766 995.3687046 1048.564606 0.973874026 0.681636836 0.7956469 1.049426525 1.064681366 1.08124223 0.895851544 0.999987755 0.949267884 1 10.03420004 -5.755436019 24.98877634 1.006797288 0.803510951 0.513417728 0.083880731 108.2041372 450390.0203 0.022970892 0.038506886 1.76E-06 5.755436019 -0.203286337 HGQEEAAQS(ph)PYR ddPTM_A459_MK2206_30min_R2 3 HGQEEAAQSPYR 12 0 J3KQ72;Q9NRD1 J3KQ72 FBXO6 F-box only protein 6 1 HGQEEAAQS(1)PYR;HGQEEAAQS(1)PYR;HGQEEAAQS(1)PYR 136.14 0.0014321 11902700 19085.3 18979 14763.65 17513.4 16470.48 15025.8 18076.3 16618.49 14375.7 18430.5 TRUE FALSE 20546.48524 18036.53046 15255.86272 16082.4992 15823.7662 15597.61735 15702.8601 18790.5837 15626.0724 17829.11429 1.152411999 1.011633565 0.855671374 0.90203579 0.887523964 0.874839719 0.880742579 1.053926931 0.876435707 1 14.12194741 -4.905525841 3.074203206 0.914292994 1.161183127 0.597112324 0.05988977 0.198119566 3.231997986 0.015427665 0.103335244 1.24E-05 4.905525841 0.246890132 HGRPGIGATHS(ph)SR ddPTM_A459_MK2206_30min_R2 1 HGRPGIGATHSSR 13 1 K7EM56;A0A0B4J2B4;S4R417;K7EQJ5;K7ELC2;P62841 K7EM56 RPS15 40S ribosomal protein S15 1 HGRPGIGAT(0.024)HS(0.575)S(0.401)R 58.079 0.04344 473260 2683.1 3542.1 2044.9 4502.3 3431.3 3164.8 5347.7 4068.7 2124.8 796.97 TRUE FALSE 2888.520199 3366.204465 2113.075945 4134.447688 3296.569921 3285.238682 4645.540566 4600.49306 2309.611263 770.9649342 3.746629802 4.366222529 2.740819785 5.362692263 4.275901244 4.261203767 6.025618495 5.967188462 2.995741001 1 9.590521433 -5.767124326 24.99948468 4.549789358 3.692723922 0.015045713 1.462357727 396.1131735 1741911.531 0.392748277 0.601048094 1.71E-06 5.767124326 -0.857065436 HGS(ph)FHEDEDPIGS(ph)PR ddPTM_A459_MK2206_30min_R2 1 HGSFHEDEDPIGSPR 15 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 2 HGS(1)FHEDEDPIGS(1)PR 130.47 0.0031721 9039900 27232 38130 39052 42751 36790 34622 37406 30023 22334 26855 TRUE FALSE 29316.90286 36236.51965 40353.97419 39258.10655 35345.43975 35939.56447 32494.54727 33947.10918 24276.57095 25978.72355 1.128496664 1.394853738 1.553347073 1.511163798 1.360553365 1.383423031 1.250813852 1.306727373 0.934478975 1 14.66504293 -8.074076372 1.468201326 0.955765008 1.395277808 0.630076724 0.118684068 0.268152138 1.038774343 0.112012841 0.036377239 8.43E-09 8.074076372 0.4395128 HGS(ph)GADSDYENTQSGDPLLGLEGK ddPTM_A459_MK2206_30min_R1 5 HGSGADSDYENTQSGDPLLGLEGK 24 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 HGS(0.994)GADS(0.006)DYENTQSGDPLLGLEGK;HGS(0.83)GADS(0.15)DY(0.015)ENT(0.005)QSGDPLLGLEGK;HGS(0.687)GADS(0.313)DYENTQSGDPLLGLEGK;HGS(0.712)GADS(0.288)DYENTQSGDPLLGLEGK;HGS(0.945)GADS(0.054)DYENTQSGDPLLGLEGK 231.08 5.97E-39 71852200 16425.67 18135.2 18184.1 14529.63 14271.98 14228.27 15947.49 14042.51 17010.92 15923.62 TRUE FALSE 15028.58051 16954.59518 16949.81396 15648.70462 13703.49682 15033.86235 14883.66204 13919.73782 18779.26601 17896.35826 0.839756351 0.947376831 0.947109669 0.874407206 0.765714265 0.840051486 0.8316587 0.777797226 1.049334492 1 14.12737842 -8.272869395 24.93739727 1.02466728 0.855931112 0.583732163 0.057949192 634.5616775 1384437.026 0.059979928 0.016022313 5.33E-09 8.272869395 -0.168736169 HGS(ph)GADSDYENTQSGDPLLGLEGK ddPTM_A459_MK2206_30min_R2 5 HGSGADSDYENTQSGDPLLGLEGK 24 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 HGS(0.894)GADS(0.106)DYENTQSGDPLLGLEGK;HGS(0.93)GADS(0.07)DYENTQSGDPLLGLEGK;HGS(0.979)GADS(0.021)DYENTQSGDPLLGLEGK;HGS(0.937)GADS(0.061)DY(0.002)ENTQSGDPLLGLEGK;HGS(0.5)GADS(0.5)DYENTQSGDPLLGLEGK 160.33 5.74E-13 63569000 156381 202674 184244 184928 176635 137302 208206 154811.5 129317 127262.2 TRUE FALSE 168353.6496 192609.5039 190386.603 169818.7908 169699.4224 142527.1238 180868.3021 175045.8946 140564.7589 123109.6448 1.367509831 1.564536265 1.546479996 1.379410939 1.378441329 1.157725083 1.469164356 1.421869869 1.141785106 1 16.90958427 -13.13089716 0.104118973 1.37E-12 1.680228179 0.586821354 0.112857694 90.83859808 0.868118854 21.4054512 1.926149796 7.40E-14 13.13089716 1.680228179 HGS(ph)GADSDYENTQSGDPLLGLEGKR ddPTM_A459_MK2206_30min_R2 1 HGSGADSDYENTQSGDPLLGLEGKR 25 1 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 HGS(0.705)GADS(0.292)DY(0.003)ENTQSGDPLLGLEGKR 69.72 0.00088776 4288300 13901 28330 27283 25810 28590 28280 25718 23173 26046 16620 TRUE FALSE 14965.27125 26923.1734 28192.6016 23701.24044 27467.41295 29356.21522 22341.19571 26201.79066 28311.434 16077.69076 0.930809746 1.674567187 1.753523066 1.474169443 1.708417792 1.825897491 1.389577399 1.629698634 1.760914202 1 13.97277259 -10.69227978 4.243120192 0.999825215 1.585252232 0.320394102 0.249224344 33897193.94 28472708.59 48424.13886 0.058623964 2.03E-11 10.69227978 0.585427017 HGS(ph)GPPSSGGGLYR ddPTM_A459_MK2206_30min_R1 1 HGSGPPSSGGGLYR 14 0 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 1 HGS(1)GPPSSGGGLYR 127.78 0.0011884 13466000 853.84 1058.3 736.87 792.14 1048.5 912.66 986.45 912.38 724.29 732.25 TRUE FALSE 781.2164243 989.4044776 686.8533174 853.1507601 1006.736025 964.3340205 920.6457204 904.4031579 799.5825374 822.9666582 0.94926862 1.202241267 0.834606494 1.036677187 1.223301108 1.171777752 1.118691397 1.098954798 0.971585579 1 9.684690172 -4.658968863 20.33761159 1.076797205 0.949063833 0.098120878 0.112116123 70777.33896 13991362.5 0.028774528 1675.850466 2.19E-05 4.658968863 -0.127733372 HGS(ph)GPPSSGGGLYR ddPTM_A459_MK2206_30min_R2 1 HGSGPPSSGGGLYR 14 0 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 1 HGS(1)GPPSSGGGLYR 120.6 0.0020424 13365000 2127.2 5577.2 4994.5 5114.5 4879.5 2481.3 5600.2 5996 2321.1 4724.1 TRUE FALSE 2290.060068 5300.244358 5161.014137 4696.62899 4687.906312 2575.72761 4864.887013 6779.697787 2522.985082 4569.953004 0.501112389 1.159802815 1.12933637 1.027719319 1.025810617 0.563622341 1.064537646 1.483537748 0.552081188 1 12.15796361 -4.750870584 24.97428291 1.009809628 0.501111314 0.249506607 0.259512931 643.8167053 1521250.311 0.063661873 0.894649383 1.77E-05 4.750870584 -0.508698314 HGS(ph)PEFCGILGER ddPTM_A459_MK2206_30min_R1 2 HGSPEFCGILGER 13 0 Q15464 Q15464 SHB SH2 domain-containing adapter protein B 1 HGS(1)PEFCGILGER;HGS(1)PEFCGILGER 169.98 0.00015852 22535000 6869.1 7551.2 7479.5 7220.8 6252.4 5113.9 6291.2 6665 6884 6050.6 TRUE FALSE 6284.846974 7059.615508 6971.812379 7776.947267 6003.353668 5403.444599 5871.525527 6606.728608 7599.616435 6800.194008 0.924215834 1.038149132 1.025237276 1.143636087 0.88282094 0.794601535 0.863435002 0.971550018 1.117558768 1 12.73136019 -4.463443303 13.84261536 0.975137145 0.585710652 0.02307279 0.104584958 2227142.624 16356580.36 0.028794623 23272451.33 3.44E-05 4.463443303 -0.389426493 HGS(ph)PEFCGILGER ddPTM_A459_MK2206_30min_R2 3 HGSPEFCGILGER 13 0 Q15464 Q15464 SHB SH2 domain-containing adapter protein B 1 HGS(1)PEFCGILGER;HGS(1)PEFCGILGER;HGS(1)PEFCGILGER 166.52 0.00021821 21330200 78445.1 89838 86574.6 87505 91908.9 69937.1 97288.8 71633.4 78225.8 73780 TRUE FALSE 84450.91717 85376.77556 89460.95395 80355.56159 88300.09478 72598.60535 84514.6637 80996.13133 85029.73868 71372.56464 1.183240613 1.196212802 1.253436168 1.125860644 1.237171387 1.017178039 1.184133765 1.134835658 1.191350474 1 16.12308199 -6.724283705 24.99999026 1.118841083 1.197959688 0.32221096 0.066534488 233.3552375 157011.1665 0.020988862 0.020988328 1.89E-07 6.724283705 0.079118605 HGS(ph)SDISSPR ddPTM_A459_MK2206_30min_R2 1 HGSSDISSPR 10 0 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 HGS(0.837)S(0.162)DIS(0.001)SPR 86.189 0.042534 0 3096.8 5425.9 5013.3 4795.2 6540.7 4902.6 5429.3 5396.4 4807.9 4924.5 TRUE FALSE 3333.893389 5156.457696 5180.44092 4403.416821 6283.879254 5089.171878 4716.426388 6101.728009 5226.082451 4763.813968 0.699837024 1.082422137 1.087456596 0.924346931 1.319085778 1.068297778 0.990052596 1.280849347 1.097037476 1 12.21790136 -4.760444929 5.336122361 1.101961246 0.678077572 0.50907889 0.11618093 0.128689024 10.90792826 0.028400724 0.202937117 1.74E-05 4.760444929 -0.423883674 HGS(ph)VSADEAAR ddPTM_A459_MK2206_30min_R2 1 HGSVSADEAAR 11 0 A0A1B0GU90;A0A1B0GW73;H3BNF1;A0A1B0GTV3;A0A0S2Z5D0;H3BUV4;A0A1B0GUD2;H3BUT1;A0A1B0GTU6;Q9NWW5;Q9NWW5-2 A0A1B0GU90 CLN6 Ceroid-lipofuscinosis neuronal protein 6 1 HGS(0.991)VS(0.009)ADEAAR 115.57 0.0052055 0 33155 11104 15252 16388 9754.3 14114 22079 11206 11066 4176.7 TRUE FALSE 35693.37229 10552.59151 15760.49407 15049.04798 9371.297171 14651.11816 19180.00078 12670.66268 12028.50068 4040.414621 8.834086508 2.611759558 3.900712067 3.724629621 2.319389976 3.626142249 4.747037762 3.1359808 2.977046122 1 11.98028763 -4.757322277 24.99817529 3.268186909 8.834094625 0.754614569 0.974761095 58.24063163 353577.3889 0.231842586 1.740461447 1.75E-05 4.757322277 5.565907716 HGS(ph)YEDAVHSGALND ddPTM_A459_MK2206_30min_R2 1 HGSYEDAVHSGALND 15 0 F5H282;E7EQR6;P17987 F5H282 TCP1 T-complex protein 1 subunit alpha 1 HGS(0.998)Y(0.002)EDAVHSGALND 99.747 0.0053154 5326300 36271 35760 24558 34098 28305 31001 38112 24641 23422 22910 TRUE FALSE 39047.93565 33984.2104 25376.75146 31312.08433 27193.60348 32180.76478 33107.84862 27861.66331 25459.20322 22162.44858 1.761896278 1.533414067 1.145033744 1.412844083 1.227012592 1.452040133 1.493871424 1.257156366 1.14875408 1 14.43582966 -1.522878745 0.059375149 0.505016914 3.088721593 0.512301338 0.15085982 342.2179758 1.524964768 13.59305587 76.7564479 0.03 1.522878745 2.583704679 HGSSDIS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 HGSSDISSPR 10 0 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 HGSSDIS(0.5)S(0.5)PR 86.344 0.035191 1165000 1109.6 1184.4 1097.5 940.78 1150.4 960.15 1024.8 1095.3 648.67 935.26 TRUE FALSE 1015.222693 1107.295345 1023.004758 1013.239039 1104.577132 1014.512863 956.4374619 1085.723908 716.1015678 1051.12707 0.965842021 1.053436237 0.973245564 0.963954852 1.050850239 0.965166717 0.909916117 1.03291404 0.681270218 1 10.03772137 -8.225316645 24.99980777 0.840634722 0.988751578 0.339372457 0.083027994 523.3197721 362180.0671 0.051421241 0.019433886 5.95E-09 8.225316645 0.148116856 HGSSDISS(ph)PR ddPTM_A459_MK2206_30min_R1 3 HGSSDISSPR 10 0 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 HGSSDIS(0.047)S(0.953)PR;HGSS(0.001)DIS(0.487)S(0.513)PR;HGSSDIS(0.311)S(0.688)PR 94.363 0.02392 3054680 3395.6 2911.95 2518.4 2782.16 3854 3841.3 4289.5 3512.12 1412.54 2847.83 TRUE FALSE 3106.786389 2722.381526 2347.458025 2996.442445 3700.487019 4058.791086 4003.355282 3481.413905 1559.378588 3200.64068 0.970676405 0.850573931 0.73343379 0.936200825 1.156170713 1.268118321 1.2507981 1.087724069 0.487208263 1 11.64414501 -6.027526748 6.954840415 1.066422354 0.84840957 0.134507539 0.21243678 0.353145666 65.27229224 0.065378142 0.087762379 9.39E-07 6.027526748 -0.218012784 HGSSDISS(ph)PR ddPTM_A459_MK2206_30min_R2 2 HGSSDISSPR 10 0 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 HGSSDIS(0.094)S(0.906)PR;HGSSDIS(0.205)S(0.795)PR 125.23 0.0036618 5375000 20748.6 36809 26759 65189 62266 85976 52931 33373 55313 31908 TRUE FALSE 22337.12877 34981.11859 27651.1317 59862.85017 59821.12398 89247.87693 45981.09612 37734.96569 60124.02476 30866.84457 0.723660908 1.133291046 0.895819838 1.939390015 1.938038203 2.891383235 1.489659755 1.222508041 1.947851346 1 14.91377039 -5.758695321 24.98874963 1.826170088 0.939160429 0.386690439 0.492039442 74.13662655 675108.4397 0.140319056 0.229727009 1.74E-06 5.758695321 -0.887009659 HGTDLWIDNMSSAVPNHS(ph)PEKK ddPTM_A459_MK2206_30min_R1 1 HGTDLWIDNMSSAVPNHSPEKK 22 1 Q8N6H7;H0YF45;E9PJT7;E9PK28;E9PN48;E9PIY6 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 1 HGTDLWIDNMSSAVPNHS(0.999)PEKK 81.003 0.00075718 27810000 6384 4872.5 6462.3 4298 6261.8 5541.9 5810.4 7111.3 4765.3 4461.3 TRUE FALSE 5841.007276 4555.299364 6023.657081 4629.032705 6012.379246 5855.677589 5422.798818 7049.126654 5260.669988 5013.999525 1.164939735 0.908516114 1.201367701 0.923221608 1.199118432 1.167865605 1.081531578 1.405888975 1.049196347 1 12.29174614 -6.301180163 24.99019079 1.168304463 1.05028697 0.111926929 0.134035074 957.5517242 602134.6879 0.038967752 0.044185851 5.00E-07 6.301180163 -0.118017494 HGTDLWIDNMSSAVPNHS(ph)PEKK ddPTM_A459_MK2206_30min_R2 2 HGTDLWIDNMSSAVPNHSPEKK 22 1 Q8N6H7;H0YF45;E9PJT7;E9PK28;E9PN48;E9PIY6 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 1 HGTDLWIDNMSSAVPNHS(1)PEKK;HGTDLWIDNMSSAVPNHS(1)PEKK 117.29 2.29E-05 32507000 169497 290890 233566 281630 298650 198352 360850 243921 227064 142883 TRUE FALSE 182473.8206 276444.8256 241352.9739 258619.9281 286923.5004 205900.4244 313469.9615 275802.3122 246813.6163 138220.7394 1.320162382 2.000024213 1.746141533 1.871064568 2.075835375 1.489649276 2.267893826 1.995375755 1.785648213 1 17.07661458 -8.577108353 18.84539533 0.999999996 1.860314828 0.478364455 0.263180285 1240.899675 431227.2464 0.243376336 0.0628395 2.65E-09 8.577108353 0.860314832 HGVESTLER ddPTM_A459_MK2206_30min_R1 1 HGVESTLER 9 0 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 88.496 0.043722 1616900 1724.1 1432.7 1724.2 1510.4 2232.9 2133.9 2423.6 1950.3 1508.9 1975 FALSE TRUE 1577.456241 1339.43097 1607.166108 1626.73127 2143.958865 2254.719574 2261.926066 1933.248733 1665.755555 2219.67791 0.710668982 0.603434833 0.724053747 0.732868162 0.965887372 1.015786824 1.019033462 0.870959126 0.750449219 1 11.11613463 -6.146779257 3.476293141 0.938810995 0.677537476 0.685203937 0.081496793 0.155464814 3.469979028 0.027108479 0.036098852 7.13E-07 6.146779257 -0.26127352 HGVVPLATYMR ddPTM_A459_MK2206_30min_R2 1 HGVVPLATYMR 11 0 P46778;M0R181;G3V1B3 P46778 RPL21 60S ribosomal protein L21 0 86.189 0.047511 2895400 25967 30193 24814 28012 30453 28063 30286 26467 27846 26512 FALSE TRUE 27955.05349 28693.65952 25641.28638 25723.32999 29257.26221 29130.95713 26309.41182 29926.32777 30267.99475 25646.91561 1.089996704 1.118795724 0.99978051 1.002979477 1.140771181 1.135846414 1.025831418 1.166858745 1.180180697 1 14.64649771 -6.276188743 24.81117635 1.113850097 1.053802388 0.151367394 0.063374188 1360.070456 2287885.257 0.020097185 0.022886172 5.29E-07 6.276188743 -0.060047709 HGYIGEFEIIDDHR ddPTM_A459_MK2206_30min_R1 3 HGYIGEFEIIDDHR 14 0 I3L3P7;I3L246;H3BN98;P62244 I3L3P7 RPS15A 40S ribosomal protein S15a 0 ;; 116.63 0.0014789 55002600 13062.9 12904.3 12020.7 11033.3 12820.9 12312.6 13897.5 11080.4 10683.9 9496.6 FALSE TRUE 11951.83176 12064.22772 11204.76838 11883.08668 12310.2164 13009.72877 12970.42313 10983.52523 11794.52964 10673.1105 1.119807741 1.130338501 1.049812833 1.11336678 1.153386016 1.218925707 1.215243029 1.029083811 1.10506957 1 13.38169307 -8.356015965 1.474527071 1.012333341 1.137235177 0.333970421 0.056255679 0.480505862 2.140160657 0.057539017 0.017385589 4.41E-09 8.356015965 0.124901836 HGYIGEFEIIDDHR ddPTM_A459_MK2206_30min_R2 3 HGYIGEFEIIDDHR 14 0 I3L3P7;I3L246;H3BN98;P62244 I3L3P7 RPS15A 40S ribosomal protein S15a 0 ;; 147.96 0.00026427 10860900 55293 64609 59778 75311 76337 69677 75866 60914 55395 33283.3 FALSE TRUE 59526.27459 61400.61101 61770.96868 69157.85039 73339.62582 72328.60706 65904.70307 68875.66895 60213.15697 32197.26865 1.848798892 1.907013035 1.918515802 2.147941527 2.277821346 2.246420585 2.046903537 2.139177385 1.870132452 1 14.97465069 -8.728196579 3.067301309 1.000081706 2.070297001 0.845870953 0.13603803 0.493280797 6.81183573 0.149417118 0.039670969 1.87E-09 8.728196579 1.070215295 HHEDNLLR ddPTM_A459_MK2206_30min_R1 2 HHEDNLLR 8 0 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 0 ; 148.99 0.002093 13601600 1963.46 1878.58 1900.58 1377.77 1807.34 1413.08 2109.5 1678.28 753.91 1470.09 FALSE TRUE 1796.457416 1756.284101 1771.573925 1483.886084 1735.349821 1493.087368 1968.779104 1663.606975 832.2816424 1652.215848 1.087301891 1.062987081 1.072241213 0.898118782 1.050316654 0.903687839 1.191599213 1.006894455 0.50373663 1 10.69018646 -8.073403245 13.02481844 0.75267966 1.035158268 0.404588695 0.137395992 1.400265321 246.6111723 0.085650221 0.032368374 8.44E-09 8.073403245 0.282478608 HHEDNLLR ddPTM_A459_MK2206_30min_R2 1 HHEDNLLR 8 0 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 0 107.9 0.017773 0 3805 5174.2 4917 6196.4 5468.5 7549.6 7565.1 4344.1 4472.9 5477 FALSE TRUE 4096.313726 4917.256752 5080.930326 5690.134299 5253.779213 7836.905318 6571.793283 4911.888786 4861.944757 5298.285939 0.773139422 0.928084443 0.95897624 1.073957571 0.991599788 1.479139746 1.24036214 0.927071291 0.917644841 1 12.37130999 -5.252743324 1.141239952 1.110835038 0.761737723 0.282082234 0.15962158 1.17468987 2.147207739 0.057961246 0.405209661 5.59E-06 5.252743324 -0.349097316 HHFET(ph)LTESPCR ddPTM_A459_MK2206_30min_R2 1 HHFETLTESPCR 12 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 HHFET(0.819)LT(0.114)ES(0.067)PCR 96.135 0.023586 20401000 39172 55347 39471 69210 60542 46746 67373 37592 37059 54714 TRUE FALSE 42171.03844 52598.54846 40786.94344 63555.32161 58164.81688 48524.95179 58526.84417 42505.40347 40282.32483 52928.68666 0.796752028 0.993762585 0.770601842 1.200772693 1.098928021 0.916798713 1.105767928 0.803069302 0.761067908 1 15.69176224 -10.52143791 9.465471346 0.999994322 0.948007769 0.01141501 0.149975877 0 1.17E-10 0.148652716 0.036053579 3.01E-11 10.52143791 -0.051986553 HHFETLTES(ph)PCR ddPTM_A459_MK2206_30min_R1 5 HHFETLTESPCR 12 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 HHFETLTES(1)PCR;HHFETLTES(0.999)PCR;HHFETLT(0.019)ES(0.981)PCR;HHFET(0.001)LT(0.002)ES(0.998)PCR;HHFETLTES(1)PCR 241.41 1.31E-13 103171400 19136.05 19818.34 19047.89 15394.52 18963.74 18017.6 20121.8 16665.69 17153.99 17444.7 TRUE FALSE 17508.42846 18528.16246 17754.9723 16580.2086 18208.37408 19037.74094 18779.51144 16519.98363 18937.20865 19605.88114 0.893019209 0.945030847 0.905594203 0.845675258 0.928720008 0.97102195 0.957850928 0.842603478 0.96589429 1 14.25899886 -6.505618666 24.868055 0.939572686 0.899561178 0.20745549 0.044856262 1412.964842 2035782.214 0.014361954 0.015916566 3.12E-07 6.505618666 -0.040011508 HHFETLTES(ph)PCR ddPTM_A459_MK2206_30min_R2 3 HHFETLTESPCR 12 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 HHFETLT(0.002)ES(0.998)PCR;HHFET(0.01)LT(0.002)ES(0.988)PCR;HHFET(0.001)LT(0.043)ES(0.955)PCR 182.7 6.86E-05 82213000 160406 290354 195385 308941 312800 256820 335806 173279 187829 221952 TRUE FALSE 172686.8067 275935.4426 201899.0384 283699.532 300517.9003 266593.4651 291714.2688 195927.1603 204166.0269 214709.7244 0.804280324 1.285155776 0.940334859 1.321316642 1.399647366 1.241645975 1.358644885 0.91252113 0.950893246 1 17.71202801 -7.779560591 24.93381865 0.948780253 1.201583783 0.272806619 0.178007407 318.716372 438530.2005 0.097824619 0.047139529 1.66E-08 7.779560591 0.25280353 HHNS(ph)TAELQK ddPTM_A459_MK2206_30min_R2 2 HHNSTAELQK 10 0 A0A0A0MS99;I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9 A0A0A0MS99 ABCC1 Multidrug resistance-associated protein 1 1 HHNS(0.989)T(0.011)AELQK;HHNS(0.959)T(0.041)AELQK 115.12 0.0044635 6936300 86372 65540 56871 90678 93747 79508 149002 68483 133557 90091 TRUE FALSE 92984.70673 62285.3789 58767.05076 83269.31734 90066.02174 82533.73265 129437.8584 77433.96324 145173.5464 87151.33805 1.066933782 0.714680696 0.674310367 0.955456556 1.033443935 0.947016242 1.48520793 0.888499993 1.665763828 1 16.41123519 -6.739987873 1.219813704 1.251160008 0.823428299 0.342065908 0.239300004 0.488528885 1.533898686 0.112523014 0.103519727 1.82E-07 6.739987873 -0.42773171 HHPDLIFCR ddPTM_A459_MK2206_30min_R1 1 HHPDLIFCR 9 0 Q7RTV0 Q7RTV0 PHF5A PHD finger-like domain-containing protein 5A 0 117.81 0.010416 5752400 3204.6 2153.4 1939.6 1744.4 5679.4 4852.3 4908.7 2940 1835.6 1606.7 FALSE TRUE 2932.031942 2013.213269 1807.945356 1878.75399 5453.177472 5127.033033 4581.249579 2914.29589 2026.417189 1805.750126 1.623719639 1.114890283 1.001215689 1.040428553 3.019895939 2.839281559 2.537034063 1.613897653 1.122202435 1 10.81838256 -6.221903548 24.82378642 2.119357787 1.175490314 0.270942294 0.652662189 632.6298522 397215.8126 0.204964163 0.264603075 6.00E-07 6.221903548 -0.943867473 HHPVFSSS(ph)DPLEK ddPTM_A459_MK2206_30min_R2 1 HHPVFSSSDPLEK 13 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 HHPVFS(0.065)S(0.339)S(0.596)DPLEK 119.45 0.0021347 2755800 55425 68292 63523 63604 63263 69165 78286 53167 60923 69534 TRUE FALSE 59668.38061 64900.71859 65640.82512 58407.34974 60778.97675 71797.12254 68006.95416 60116.10945 66221.97242 67265.11127 0.88706284 0.964849643 0.975852472 0.868315664 0.90357357 1.067375363 1.011028643 0.893719022 0.984492126 1 16.03757079 HHTAAFEER ddPTM_A459_MK2206_30min_R1 4 HHTAAFEER 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ;;; 148.94 0.0020776 7624200 1051.48 844.77 756.774 967.409 1043.875 1156.328 1669.45 1443.48 308.15 972.53 FALSE TRUE 962.0461045 789.7753195 705.4062894 1041.919009 1002.295248 1221.798292 1558.084037 1430.859807 340.1832952 1093.014359 0.880177005 0.72256628 0.645376965 0.95325281 0.917000989 1.117824558 1.425492743 1.30909516 0.311234059 1 10.09409664 -6.156888297 1.935668057 1.066032124 0.752661532 0.129231876 0.286018221 0.615805701 4.548149644 0.098691783 0.139687674 6.97E-07 6.156888297 -0.313370592 HHTAAFEER ddPTM_A459_MK2206_30min_R2 4 HHTAAFEER 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ;;; 145.46 0.0025982 7168600 903.44 6311.38 3259.89 5054.8 11311.7 5589.7 6844.3 3320.11 3261.11 3271.99 FALSE TRUE 972.608061 5997.966047 3368.573106 4641.80667 10867.54582 5802.41995 5945.635189 3754.059777 3544.755453 3165.225234 0.307279258 1.894957105 1.064244361 1.466501221 3.433419431 1.833177585 1.878424045 1.18603243 1.119906228 1 11.62809245 -6.00425119 24.86013564 1.825019668 1.185428538 0.125774455 0.739275188 369.7016449 2161976.306 0.217605533 0.314104122 9.90E-07 6.00425119 -0.63959113 HHYEQQQEDLAR ddPTM_A459_MK2206_30min_R1 1 HHYEQQQEDLAR 12 0 A0A5F9ZHX5;K7EMY3;Q8TDI0;Q12873-2;Q12873;Q12873-3;Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;F5GWX5;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y4X2;A0A2R8Y7I0 A0A5F9ZHX5;Q12873-2;Q14839-2 CHD5;CHD3;CHD4 Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 4 0 225.55 5.75E-49 0 1748.3 2122.3 2222.5 1977.8 2081.1 2100.7 2228.1 1871.8 1624.9 1752 FALSE TRUE 1599.597904 1984.137884 2071.642892 2130.130499 1998.20538 2219.639819 2079.467514 1855.43505 1793.81417 1969.050987 0.812369977 1.007662015 1.052102209 1.081805658 1.014806317 1.12726376 1.056076012 0.942299139 0.911004429 1 10.94328475 -4.763453824 4.438357784 1.027973458 0.793991933 0.521544621 0.060093592 0.178353536 7.597458864 0.016385084 0.13406731 1.72E-05 4.763453824 -0.233981525 HIADLAGNSEVILPVPAFNVINGGS(ph)HAGNK ddPTM_A459_MK2206_30min_R1 1 HIADLAGNSEVILPVPAFNVINGGSHAGNK 30 0 P06733;A0A2R8Y6G6;P06733-2;K7EM90;A0A2R8YEM5 P06733 ENO1 Alpha-enolase;Enolase 1 HIADLAGNSEVILPVPAFNVINGGS(1)HAGNK 79.786 1.26E-05 2883900 885.7 433.09 603.81 478.38 775.75 1159.1 998.99 762.83 510.82 559.58 TRUE FALSE 810.366564 404.8957623 562.8250595 515.2249105 744.8502348 1224.72724 932.3491999 756.1606577 563.921567 628.904995 1.288535741 0.643810696 0.894928589 0.819241244 1.184360501 1.947396268 1.482496096 1.202344812 0.896672107 1 9.296698284 -6.441173961 5.433909585 1.352867643 0.897739813 0.259071049 0.308548949 0.284107435 14.15497958 0.101424477 0.114255204 3.62E-07 6.441173961 -0.45512783 HIADLAGNSEVILPVPAFNVINGGSHAGNK ddPTM_A459_MK2206_30min_R1 1 HIADLAGNSEVILPVPAFNVINGGSHAGNK 30 0 P06733;A0A2R8Y6G6;P06733-2;K7EM90;A0A2R8YEM5 P06733 ENO1 Alpha-enolase;Enolase 0 79.332 1.49E-05 21407000 2536.6 2551.4 3087.8 2821 3300.1 2733.1 3640.6 2916.2 2913.8 2530 FALSE TRUE 2320.84885 2385.303396 2878.208739 3038.273909 3168.650029 2887.84576 3397.742217 2890.703971 3216.699937 2843.435501 0.81621294 0.838880782 1.012229305 1.068522183 1.114373802 1.015618522 1.194942602 1.016623718 1.131272342 1 11.47341936 -5.337063245 2.217677298 1.082306824 0.809514076 0.752878721 0.056475193 0.142359759 1.316575795 0.014717976 0.046865611 4.60E-06 5.337063245 -0.272792747 HIAEDADR ddPTM_A459_MK2206_30min_R2 3 HIAEDADR 8 0 P09493-3;P09493-9;A0A0S2Z4G6;P09493-4;P09493-10;P09493;Q6ZN40;P09493-2;H7BYY1;H0YKX5;P09493-8;P09493-7;P09493-5;H0YKJ4;F5H7S3;A0A494BZZ2;H0YK48;B7Z596;P09493-6;A0A494C0V8;H0YL42 P09493-3 TPM1 Tropomyosin alpha-1 chain 0 ;; 137.9 0.003515 56691000 18083.4 11175.8 12951.6 9020.92 12297.3 10002.6 13862.8 35886.2 20655.2 12823.6 FALSE TRUE 19467.87901 10620.82602 13383.39988 8283.88198 11814.44621 10383.25595 12042.59771 40576.64956 22451.75196 12405.16698 1.569336312 0.856161472 1.078856891 0.667776741 0.952381071 0.837010575 0.970772721 3.27094747 1.809870999 1 13.59865353 -7.681948759 19.18933416 2.155291494 0.968729617 0.408407316 0.565015301 3.717425963 895.700509 0.248004125 0.143183528 2.08E-08 7.681948759 -1.186561877 HIAEEADR ddPTM_A459_MK2206_30min_R1 3 HIAEEADR 8 0 J3KN67;A0A2R2Y2Q3;A0A494C0P6;P06753;P06753-7;P06753-2;A0A087WWU8;P06753-5;P06753-3;P06753-6;P06753-4;P67936;A0A2R8Y5V9;A0A2R8YGX3;A0A2R8YH90;A0A2R8YE05;K7ENT6;P67936-2;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72 J3KN67;P06753-2;P67936 TPM3;TPM4 Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain 0 ;; 148.99 0.002093 34186400 5265.8 4564.8 3012.41 4112.86 1896.46 2861.29 4595.9 6449.4 523.95 2371.32 FALSE TRUE 4817.916058 4267.63069 2807.936002 4429.63319 1820.919982 3023.293767 4289.315897 6393.013576 578.4164775 2665.097024 1.807782611 1.601304062 1.053596164 1.662090779 0.683247164 1.13440289 1.609440804 2.398792058 0.217033929 1 11.37997234 -5.051588212 4.966974191 1.277844424 1.768463814 0.104692546 0.560691207 0.453376346 24.67858885 0.140856445 0.433255631 8.88E-06 5.051588212 0.49061939 HIAEEADR ddPTM_A459_MK2206_30min_R2 4 HIAEEADR 8 0 J3KN67;A0A2R2Y2Q3;A0A494C0P6;P06753;P06753-7;P06753-2;A0A087WWU8;P06753-5;P06753-3;P06753-6;P06753-4;P67936;A0A2R8Y5V9;A0A2R8YGX3;A0A2R8YH90;A0A2R8YE05;K7ENT6;P67936-2;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72 J3KN67;P06753-2;P67936 TPM3;TPM4 Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain 0 ;;; 148.99 0.002093 223304000 68902 61893.1 53409.1 58803.7 73598.3 56944.1 61641.1 77888.1 69767.4 63350.6 FALSE TRUE 74177.1901 58819.57865 55189.73274 53999.24961 70708.46094 59111.14763 53547.54953 88068.3421 75835.64234 61283.47511 1.210394645 0.959795092 0.900564673 0.881138831 1.153793267 0.964552802 0.873768164 1.437065081 1.237456626 1 15.90321049 -7.752068345 24.9999996 1.252945665 0.988148733 0.348164958 0.144401734 183.2823002 488963.0446 0.067566474 0.038333588 1.77E-08 7.752068345 -0.264796932 HIAFT(ph)PESQR ddPTM_A459_MK2206_30min_R2 2 HIAFTPESQR 10 0 E9PQP7;Q5H9R7-2;Q5H9R7;Q5H9R7-5;H0YEN2;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-3 E9PQP7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 HIAFT(0.997)PES(0.003)QR;HIAFT(0.999)PES(0.001)QR 103.46 0.019245 8501300 41759 36498 38535 41890 38394 45379 41469 30507 29822 40645 TRUE FALSE 44956.10115 34685.56239 39819.73767 38467.453 36886.45865 47105.92964 36024.07049 34494.36965 32415.86365 39318.75698 1.143375442 0.882163249 1.012741519 0.978348655 0.938138982 1.198052361 0.916205731 0.877300614 0.824437651 1 15.26293009 -7.499717938 24.98216156 0.889872069 1.016004633 0.273762937 0.095570791 967.0547436 1043107.054 0.039092041 0.026158453 3.16E-08 7.499717938 0.126132564 HIALS(ph)PR ddPTM_A459_MK2206_30min_R2 1 HIALSPR 7 0 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 HIALS(1)PR 90.906 0.021272 0 4094.3 10366 7553.6 10457 9705 11257 10407 6567.6 10431 7069.3 TRUE FALSE 4407.762756 9851.239514 7805.433254 9602.62965 9323.932936 11685.39302 9040.548399 7426.00787 11338.26953 6838.62932 0.64453892 1.440528365 1.141373935 1.404174609 1.363421309 1.708733209 1.321982517 1.085891269 1.657973988 1 12.73949148 -4.75729929 24.98410724 1.356181725 0.644537873 0.484405357 0.217273015 102.0249791 615605.1835 0.051877885 0.390451409 1.75E-05 4.75729929 -0.711643852 HIDCAYVYQNEHEVGEAIQEK ddPTM_A459_MK2206_30min_R2 2 HIDCAYVYQNEHEVGEAIQEK 21 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 131.84 2.73E-05 31266000 112808 127318 141582 157008 133431 116643 153249 123796 116270 127097 FALSE TRUE 121444.6672 120995.5733 146302.2732 144179.9442 128191.8285 121081.9311 133127.2222 139976.5623 126382.9544 122949.8353 0.987757868 0.984105208 1.189934682 1.172672935 1.042635219 0.984807591 1.082776743 1.138485155 1.027922926 1 16.90771028 -8.513595394 23.5840829 0.999999981 1.074152087 0.102661784 0.072023085 605.8744873 1539202.688 0.075175512 0.019410234 3.06E-09 8.513595394 0.074152106 HIDFSLR ddPTM_A459_MK2206_30min_R1 2 HIDFSLR 7 0 P46781 P46781 RPS9 40S ribosomal protein S9 0 ; 143.85 0.0046584 43512000 2962.6 2719 2595.3 2286.4 2829.7 2785.3 2557.5 2519.6 2186.2 2018.26 FALSE TRUE 2710.615313 2541.992606 2419.138267 2462.498924 2716.987057 2943.001279 2386.893841 2497.571403 2413.463313 2268.297286 1.195000025 1.120661133 1.066499652 1.085615602 1.197809068 1.297449544 1.052284397 1.101077631 1.063997796 1 11.14739402 -8.178383736 1.263067845 1.010187806 1.148102741 0.337271147 0.067942353 0.574746558 1.737133811 0.068691301 0.022333411 6.63E-09 8.178383736 0.137914935 HIDFSLR ddPTM_A459_MK2206_30min_R2 2 HIDFSLR 7 0 P46781 P46781 RPS9 40S ribosomal protein S9 0 ; 173.59 1.26E-05 24112000 10638.5 14459.7 11755.9 13727.5 14685.6 14422.4 18830.1 11530.9 10585.6 11841.6 FALSE TRUE 11452.99174 13741.65232 12147.83584 12605.91934 14108.96955 14971.25454 16357.68525 13038.02822 11506.31635 11455.20956 0.999806392 1.19959851 1.060463868 1.100452966 1.231664028 1.306938512 1.427969097 1.13817457 1.004461445 1 13.48371623 -6.251926655 21.38018168 1.210035251 1.095787609 0.093898221 0.130442015 199.8144284 449083.8432 0.040344726 0.051180114 5.60E-07 6.251926655 -0.114247642 HIDLVEGDEGR ddPTM_A459_MK2206_30min_R1 1 HIDLVEGDEGR 11 0 P19367-4;P19367-2;P19367;P19367-3 P19367-4 HK1 Hexokinase-1 0 100.09 0.023343 3017200 1687.8 2139.6 2183.5 1497.9 2001.9 2171.9 1930.7 1978.7 2011.5 1988.2 FALSE TRUE 1544.243747 2000.311651 2035.290104 1613.268518 1922.160084 2294.871101 1801.906526 1961.400435 2220.602623 2234.513226 0.691087316 0.895188996 0.910842719 0.72197761 0.860214234 1.027011644 0.806397789 0.877775263 0.993774661 1 11.12574487 -1.522878786 0.10317334 1.069593686 0.216213672 0.363151411 0.086167479 155.3113317 1.134631318 1.024642397 18.78316269 0.029999997 1.522878786 -0.853380014 HIDSAHLYNNEEQVGLAIR ddPTM_A459_MK2206_30min_R1 2 HIDSAHLYNNEEQVGLAIR 19 0 Q04828;A6NHU4;A0A0A0MSS8;P42330;S4R3Z2;S4R3D5 Q04828;A0A0A0MSS8 AKR1C1;AKR1C3 Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C3 0 ; 114.54 0.00027346 23516000 9120.6 7007.9 7922.7 6165.8 11856 10012.4 10514.3 8306.8 6942.4 6314.1 FALSE TRUE 8344.845076 6551.684436 7384.929198 6640.690984 11383.75041 10579.29344 9812.910231 8234.174523 7664.087324 7096.338377 1.175936748 0.923248595 1.040667568 0.935791197 1.604172435 1.490810172 1.382813179 1.160341304 1.080005901 1 12.79285909 -6.228918776 24.99653379 1.309419769 1.013632001 0.333109001 0.183593603 745.9870979 573393.1419 0.056706916 0.073202062 5.90E-07 6.228918776 -0.295787769 HIEPELAGRDS(ph)PIR ddPTM_A459_MK2206_30min_R1 2 HIEPELAGRDSPIR 14 1 P86791;P86790 P86791 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B 1 HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR 144.41 0.0002915 45763000 2906.8 3300.4 3415.1 2367.57 3239.6 3204.5 3672.9 2893.6 3215.6 4136.3 TRUE FALSE 2659.561396 3085.54336 3183.292527 2549.920652 3110.559872 3385.936021 3427.887543 2868.30156 3549.873127 4648.736071 0.572104192 0.663738124 0.684765166 0.548519127 0.669119482 0.72835626 0.737380546 0.617006755 0.763621138 1 12.1826228 -14.52287875 0.177384871 2.378399255 0.592191956 0.789633073 0.055214021 60.92042511 0.581842752 29.45176182 0.182780219 3.00E-15 14.52287875 -1.786207299 HIEPELAGRDS(ph)PIR ddPTM_A459_MK2206_30min_R2 4 HIEPELAGRDSPIR 14 1 P86791;P86790 P86791 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B 1 HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR 167.18 0.00012059 62215400 72439 71026 69629 77710 66886 75832 77961 64833.5 57795 76988 TRUE FALSE 77984.98554 67498.95212 71950.39611 71360.84442 64259.71956 78717.8399 67724.62705 73307.46106 62821.90463 74475.88787 1.047117232 0.906319536 0.966089807 0.958173799 0.862825827 1.056957388 0.90934971 0.984311341 0.84352005 1 16.1844858 -4.748105315 24.71942018 0.943760947 1.047117522 0.206139591 0.061246744 903.0162833 1673947.467 0.014095704 0.262302475 1.79E-05 4.748105315 0.103356575 HIISATSLST(ph)SPTELGSR ddPTM_A459_MK2206_30min_R1 1 HIISATSLSTSPTELGSR 18 0 Q5JSZ5;A0A1W2PQP5;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 HIISATSLS(0.002)T(0.985)S(0.013)PTELGSR 268.18 1.64E-53 22664000 4166.7 3205.2 3637.9 2871.8 4459.3 5011.5 4912.1 3893 2878.1 3023.9 TRUE FALSE 3812.300285 2996.540897 3390.969484 3092.986534 4281.676638 5295.246799 4584.422772 3858.963911 3177.288794 3398.523561 1.121751907 0.881718441 0.997777247 0.910097128 1.25986375 1.55810213 1.348945414 1.135482465 0.934902683 1 11.73069241 -6.266786519 24.7719478 1.237720977 0.972394987 0.278067654 0.175847427 488.9406889 2265136.266 0.057664182 0.067324753 5.41E-07 6.266786519 -0.26532599 HIISATSLST(ph)SPTELGSR ddPTM_A459_MK2206_30min_R2 2 HIISATSLSTSPTELGSR 18 0 Q5JSZ5;A0A1W2PQP5;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 HIISATS(0.001)LS(0.001)T(0.49)S(0.49)PT(0.019)ELGSR;HIISATS(0.001)LS(0.002)T(0.982)S(0.014)PTELGSR 286.84 3.34E-80 27801300 48859 73039 56304 82654 74314 77292 87310 55621 69764 56300 TRUE FALSE 52599.68261 69411.98947 58181.14726 75900.9038 71396.05896 80233.40122 75846.09212 62890.85568 75831.94662 54462.93561 0.965788605 1.274481236 1.068270496 1.393624911 1.310910956 1.473174377 1.392618508 1.154745975 1.392358781 1 15.73298713 -5.757652506 24.99999453 1.320156268 1.120010199 0.268616495 0.148170473 123.7990016 817275.2377 0.038778987 0.064024251 1.75E-06 5.757652506 -0.200146069 HIISATSLSTS(ph)PTELGSR ddPTM_A459_MK2206_30min_R1 2 HIISATSLSTSPTELGSR 18 0 Q5JSZ5;A0A1W2PQP5;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 HIISATS(0.001)LST(0.129)S(0.869)PT(0.001)ELGSR;HIISATSLST(0.028)S(0.869)PT(0.102)ELGS(0.001)R 231.17 6.46E-19 34453300 6303.5 5454.6 6576.6 4984.2 7531.4 7101.5 7157.3 6733.3 5109 5001.2 TRUE FALSE 5767.354224 5099.504549 6130.198715 5368.083948 7231.40839 7503.580793 6679.849576 6674.431468 5640.098833 5620.786413 1.026076033 0.907258197 1.090630076 0.95504144 1.286547443 1.334969921 1.188419037 1.187455096 1.003435893 1 12.45655628 -6.249886771 24.79020594 1.185666313 0.995350385 0.365613746 0.109346513 690.2590041 1481193.65 0.032940175 0.042147443 5.62E-07 6.249886771 -0.190315928 HIISATSLSTS(ph)PTELGSR ddPTM_A459_MK2206_30min_R2 2 HIISATSLSTSPTELGSR 18 0 Q5JSZ5;A0A1W2PQP5;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 HIISATS(0.006)LS(0.001)T(0.161)S(0.831)PT(0.001)ELGSR;HIISATSLST(0.049)S(0.947)PT(0.004)ELGSR 161.94 8.96E-06 48523900 81314 122564 99719 119687 110118 136446 127801 92890 118636 92673 TRUE FALSE 87539.46236 116477.65 103043.5817 109908.1892 105794.214 141638.5481 111020.5752 105031.0419 128954.7448 89649.0876 0.976467968 1.299261968 1.149410267 1.22598224 1.180092479 1.579921803 1.238390464 1.171579597 1.43843901 1 16.45200128 -4.756916896 24.95177578 1.262331582 0.976467529 0.228139947 0.152218256 196.5116027 1084070.437 0.036693639 0.284510988 1.75E-05 4.756916896 -0.285864053 HIISATSLSTSPT(ph)ELGSR ddPTM_A459_MK2206_30min_R1 1 HIISATSLSTSPTELGSR 18 0 Q5JSZ5;A0A1W2PQP5;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 HIISATS(0.001)LS(0.001)T(0.013)S(0.224)PT(0.758)ELGS(0.003)R 199.61 4.28E-10 4443700 1246.5 978.91 1182.8 1132.1 1492.8 1499.5 1221.8 1367.9 1059.3 1179.9 TRUE FALSE 1140.478629 915.1827811 1102.514831 1219.294538 1433.338615 1584.400394 1140.295951 1355.940595 1169.418026 1326.07492 0.860040871 0.690144099 0.831412174 0.919476358 1.080888111 1.194804585 0.859903113 1.022521861 0.881864221 1 10.37294657 -5.830056382 2.717615927 1.009007803 0.775261972 0.488028666 0.097496628 0.222150349 3.330136817 0.029558511 0.050133998 1.48E-06 5.830056382 -0.233745831 HIKEEPLS(ph)EEEPCT(ph)STAIASPEK ddPTM_A459_MK2206_30min_R1 1 HIKEEPLSEEEPCTSTAIASPEK 23 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 HIKEEPLS(0.992)EEEPCT(0.386)S(0.329)T(0.28)AIAS(0.013)PEK 78.221 0.0024224 16336000 4157.3 5407.3 5856.4 6091.5 4020.6 3448.9 4098.9 4647.5 4940.3 3757.6 TRUE FALSE 3803.699804 5055.283787 5458.883885 6560.668385 3860.450988 3644.173738 3825.46986 4606.867397 5453.861864 4223.119856 0.900684786 1.197049565 1.292618744 1.553512239 0.914122999 0.862910327 0.905839756 1.090868257 1.291429571 1 12.04409348 HIKEEPLS(ph)EEEPCTST(ph)AIASPEK ddPTM_A459_MK2206_30min_R1 3 HIKEEPLSEEEPCTSTAIASPEK 23 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 HIKEEPLS(0.992)EEEPCT(0.118)S(0.19)T(0.418)AIAS(0.281)PEK;HIKEEPLS(0.999)EEEPCT(0.232)S(0.202)T(0.424)AIAS(0.143)PEK;HIKEEPLS(1)EEEPCT(0.018)S(0.121)T(0.858)AIAS(0.003)PEK 84.971 0.00096255 126329000 10800.1 14386.7 13816.1 13893.2 9944.1 8659.4 9174.6 11283.2 12582.7 9325.5 TRUE FALSE 9881.494781 13450.12322 12878.30163 14963.25667 9548.00544 9149.687745 8562.579174 11184.55217 13890.71669 10480.81334 0.942817552 1.283309107 1.228750213 1.427680866 0.91099852 0.872994055 0.816976593 1.06714544 1.325347207 1 13.35546306 -6.281880173 24.96152824 0.986875071 1.225695205 0.285461358 0.171148276 1037.669603 1267159.517 0.055754048 0.063292374 5.23E-07 6.281880173 0.238820134 HIKEEPLS(ph)EEEPCTSTAIAS(ph)PEK ddPTM_A459_MK2206_30min_R2 5 HIKEEPLSEEEPCTSTAIASPEK 23 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 HIKEEPLS(1)EEEPCT(0.026)S(0.024)T(0.021)AIAS(0.929)PEK;HIKEEPLS(0.999)EEEPCT(0.027)S(0.074)T(0.074)AIAS(0.826)PEK;HIKEEPLS(0.99)EEEPCT(0.01)S(0.007)T(0.014)AIAS(0.979)PEK;HIKEEPLS(0.998)EEEPCT(0.012)S(0.012)T(0.012)AIAS(0.967)PEK;HIKEEPLS(0.998)EEEPCT(0.1)S(0.091)T(0.305)AIAS(0.505)PEK 74.45 0.0019343 179400900 171173 198979 165657 175804 174921 124986 226589 152992 131638 146824 TRUE FALSE 184278.1365 189097.9922 171179.9217 161440.2508 168052.7226 129742.4298 196837.5921 172988.5797 143087.6353 142033.1449 1.297430516 1.331365241 1.205211092 1.136637867 1.183193703 0.913465867 1.385856747 1.217945148 1.007424256 1 17.11586811 -1.522878745 0.266134716 1.086709206 2.800410917 0.273630107 0.124907231 78.66687104 1.093855512 0.152857332 61.61987905 0.03 1.522878745 1.71370171 HIKEEPLS(ph)EEEPCTSTAIAS(ph)PEKK ddPTM_A459_MK2206_30min_R2 2 HIKEEPLSEEEPCTSTAIASPEKK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 HIKEEPLS(0.982)EEEPCT(0.023)S(0.04)T(0.152)AIAS(0.804)PEKK;HIKEEPLS(0.998)EEEPCT(0.042)S(0.06)T(0.138)AIAS(0.762)PEKK 72.639 0.0093119 18857800 179905 183419 183935 152989 183717 103974 226554 160837 131562 166262 TRUE FALSE 193678.6651 174310.6792 190067.3011 140489.3093 176503.3475 107930.8034 196807.1877 181858.9481 143005.025 160836.8846 1.204193091 1.083773039 1.18173951 0.873489372 1.097405909 0.671057536 1.223644615 1.130704245 0.889130782 1 17.29523877 -5.740661156 24.98434357 0.990796217 1.149289058 0.220700677 0.148301191 406.2475251 488480.0908 0.040002936 0.069191834 1.82E-06 5.740661156 0.158492841 HIKEEPLS(ph)EEEPCTSTAIASPEK ddPTM_A459_MK2206_30min_R1 3 HIKEEPLSEEEPCTSTAIASPEK 23 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 HIKEEPLS(1)EEEPCTSTAIASPEK;HIKEEPLS(0.966)EEEPCT(0.022)S(0.009)T(0.003)AIASPEK;HIKEEPLS(0.555)EEEPCT(0.146)S(0.146)T(0.146)AIAS(0.008)PEK 98.189 3.36E-05 174836000 20685.7 23025.7 22548.4 20612.1 19631.8 18450.3 19148.7 21091.2 19039.4 16712.1 TRUE FALSE 18926.27259 21526.72274 21017.87743 22199.64751 18849.82383 19494.94004 17871.32516 20906.80186 21018.61376 18782.52112 1.007653471 1.146104009 1.119012581 1.181931189 1.003583263 1.037929888 0.951487026 1.113098808 1.119051784 1 14.1971031 -6.275790658 24.94837792 1.038898402 1.116372885 0.260755479 0.062722334 1112.046388 1933187.622 0.020006542 0.022789534 5.30E-07 6.275790658 0.077474483 HIKEEPLS(ph)EEEPCTSTAIASPEK ddPTM_A459_MK2206_30min_R2 7 HIKEEPLSEEEPCTSTAIASPEK 23 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 HIKEEPLS(0.994)EEEPCT(0.004)S(0.001)T(0.001)AIASPEK;HIKEEPLS(1)EEEPCTSTAIASPEK;HIKEEPLS(0.966)EEEPCT(0.01)S(0.012)T(0.012)AIASPEK;HIKEEPLS(0.951)EEEPCT(0.015)S(0.015)T(0.018)AIAS(0.001)PEK;HIKEEPLS(1)EEEPCTSTAIASPEK;HIKEEPLS(0.98)EEEPCT(0.006)S(0.006)T(0.006)AIAS(0.001)PEK;HIKEEPLS(1)EEEPCTSTAIASPEK 91.883 7.58E-05 418563200 693762 824406 766112 831207 814111 616900 848552 694825 614961 602444 TRUE FALSE 746876.9521 783467.1968 791653.7917 763294.7292 782144.9116 640376.5618 737136.1031 785641.0132 668449.1962 582786.3016 1.281562298 1.34434731 1.358394646 1.309733477 1.342078407 1.098818829 1.264848026 1.34807735 1.146988518 1 19.15260744 -14.52287871 0.137475815 0.001273597 1.388701363 0.6038733 0.074336213 99.21225719 0.838942672 26.92475886 0.495713064 3.00E-15 14.52287871 1.387427766 HIKEEPLS(ph)EEEPCTSTAIASPEKK ddPTM_A459_MK2206_30min_R1 1 HIKEEPLSEEEPCTSTAIASPEKK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 HIKEEPLS(0.971)EEEPCT(0.027)S(0.002)TAIASPEKK 83.064 6.25E-05 40044000 2858.2 3258.2 3679.2 3063.5 2648.2 2576.1 2917.3 3038.5 2396.3 1696.9 TRUE FALSE 2615.095081 3046.090588 3429.466155 3299.451301 2542.716586 2721.956556 2722.69224 3011.934715 2645.40396 1907.124783 1.371223899 1.597216194 1.798238996 1.730065767 1.333272269 1.427256664 1.42764242 1.579306578 1.387116346 1 10.89718353 -6.266365321 24.98091396 1.39489942 1.634692128 0.346610131 0.173951951 526.6798776 2670947.373 0.053324148 0.062358746 5.42E-07 6.266365321 0.239792707 HIKEEPLS(ph)EEEPCTSTAIASPEKK ddPTM_A459_MK2206_30min_R2 2 HIKEEPLSEEEPCTSTAIASPEKK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 HIKEEPLS(0.996)EEEPCT(0.004)STAIASPEKK;HIKEEPLS(0.93)EEEPCT(0.047)S(0.019)T(0.003)AIASPEKK 73.809 0.00021608 59087000 69671 120908 88469 101320 118921 101699 123489 86227 95246 78951 TRUE FALSE 75005.06533 114903.8845 91418.5123 93041.83189 114251.564 105569.2267 107274.746 97497.16496 103530.3249 76374.83534 0.982065166 1.50447309 1.196971645 1.218226285 1.49593205 1.382251448 1.404582353 1.276561377 1.355555458 1 16.22080974 -4.74173078 24.95384858 1.327443309 0.98206395 0.32074331 0.144302462 1578.567333 1998582.051 0.033885995 1.317874417 1.81E-05 4.74173078 -0.345379358 HIKEEPLSEEEPCTS(ph)TAIASPEK ddPTM_A459_MK2206_30min_R1 1 HIKEEPLSEEEPCTSTAIASPEK 23 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 HIKEEPLS(0.105)EEEPCT(0.248)S(0.316)T(0.316)AIAS(0.014)PEK 69.922 0.0011242 134200000 9879.9 11057 10493 9643.8 9257.2 8177.3 9507.1 10303 9111.4 7820.6 TRUE FALSE 9039.562624 10337.18729 9780.764395 10386.56715 8888.466122 8640.291659 8872.898706 10212.92196 10058.56264 8789.474971 1.028453082 1.176087005 1.112781415 1.181705071 1.011262465 0.983027051 1.009491322 1.161949035 1.144387198 1 13.10156127 -4.41528659 11.47243001 1.088441203 9.27E-05 0.050820171 0.075252513 329886.4365 851338.128 0.02006064 8744910.672 3.84E-05 4.41528659 -1.088348479 HIMGQNVADYMR ddPTM_A459_MK2206_30min_R1 2 HIMGQNVADYMR 12 0 A0A2R8Y6J3;P46777 A0A2R8Y6J3 RPL5 60S ribosomal protein L5 0 ; 128.28 0.0034748 23208000 3816.7 4571.3 4292.2 4628.3 4484.5 4812.5 5004.1 4263.8 3781.8 3154.3 FALSE TRUE 3492.069623 4273.707539 4000.857423 4984.772468 4305.872869 5084.979591 4670.285619 4226.522046 4174.931643 3545.078498 0.985047193 1.205532555 1.128566667 1.406110604 1.21460579 1.43437715 1.317399776 1.192222414 1.177669732 1 11.79160186 -4.273575678 1.211781557 1.259541904 0.445409996 0.255596278 0.122906863 5.570994909 3.002356755 0.035687071 7.694509802 5.33E-05 4.273575678 -0.814131909 HIMGQNVADYMR ddPTM_A459_MK2206_30min_R2 1 HIMGQNVADYMR 12 0 A0A2R8Y6J3;P46777 A0A2R8Y6J3 RPL5 60S ribosomal protein L5 0 84.605 0.045522 7287200 39472 65120 56148 69403 47755 62669 58623 37770 54459 51527 FALSE TRUE 42494.00667 61886.23549 58019.9463 63732.55289 45879.89875 65053.91271 50925.72968 42706.66868 59195.74538 49845.67821 0.852511355 1.241556695 1.163991511 1.278597367 0.92043885 1.305106381 1.021667906 0.856777763 1.187580298 1 15.6051808 -7.493183172 24.87631036 1.001151943 1.134081892 0.104927684 0.155918439 1254.454594 1050873.436 0.062166857 0.041836622 3.21E-08 7.493183172 0.13292995 HISDLYEDLR ddPTM_A459_MK2206_30min_R1 2 HISDLYEDLR 10 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;E9PIA2;E9PKG0;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 132.25 0.0034734 9401600 5380.6 3830.4 3873.3 2781.95 7694.8 9160.4 9104.8 4470.2 4685.6 4881.9 FALSE TRUE 4922.951715 3581.040264 3610.391188 2996.216271 7388.299822 9679.053932 8497.435405 4431.117513 5172.684888 5486.706628 0.897250764 0.652675732 0.658025193 0.546086473 1.346581897 1.764091756 1.548731503 0.807609703 0.942766807 1 12.42172472 -6.264949014 24.92489123 1.267488914 0.683772521 0.474486364 0.28046596 278.0507192 1974670.87 0.096063024 0.113292651 5.43E-07 6.264949014 -0.583716393 HITIFSPEGR ddPTM_A459_MK2206_30min_R1 1 HITIFSPEGR 10 0 G3V5Z7;P60900;G3V3I1;G3V295;G3V3U4;G3V4S5;G3V2S7 G3V5Z7 PSMA6 Proteasome subunit alpha type;Proteasome subunit alpha type-6 0 97.472 0.028935 4765200 7049.5 6776.2 6634.4 6039 8091.5 7629.6 7923.8 7006.2 5375.9 5629.1 FALSE TRUE 6449.903007 6335.068148 6184.075412 6504.124826 7769.198421 8061.581359 7395.21776 6944.945532 5934.744043 6326.475406 1.019509694 1.00135822 0.977491418 1.028080315 1.228045305 1.274261076 1.168931717 1.097759034 0.938080631 1 12.62718626 -6.070468408 8.161053917 1.132980946 1.000103885 0.247212657 0.093859063 0.441670277 47.24828498 0.029719987 0.038542839 8.50E-07 6.070468408 -0.132877061 HIVS(ph)NDSSDSDDESHEPK ddPTM_A459_MK2206_30min_R1 1 HIVSNDSSDSDDESHEPK 18 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 HIVS(0.586)NDS(0.241)S(0.123)DS(0.048)DDES(0.002)HEPK 99.059 0.0020647 7310600 5883.1 5446.1 6367.3 3975.1 5765.5 4852.5 6540.2 5411.5 5969.1 6268.3 TRUE FALSE 5382.711452 5091.5579 5935.105416 4281.262891 5535.847926 5127.244357 6103.915191 5364.187826 6589.609306 7044.864327 0.764061762 0.72273328 0.842472635 0.60771403 0.785799083 0.727798878 0.86643474 0.761432382 0.935377745 1 12.78235621 -8.316396182 0.831957876 1.003942805 0.7412787 0.613688354 0.06684464 0.382321361 0.579448997 0.060522485 0.022663728 4.83E-09 8.316396182 -0.262664105 HIVS(ph)NDSSDSDDESHEPK ddPTM_A459_MK2206_30min_R2 2 HIVSNDSSDSDDESHEPK 18 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 HIVS(0.432)NDS(0.152)S(0.398)DS(0.018)DDESHEPK;HIVS(0.65)NDS(0.203)S(0.13)DS(0.017)DDESHEPK 117.38 0.00067492 24295800 125342 172336 160258 162463 125155 105051 166245 116332 103448 75932 TRUE FALSE 134938.2799 163778.0448 165600.9217 149189.2532 120240.7858 109048.7894 144416.8318 131536.9918 112445.72 73454.34506 1.83703605 2.229657683 2.254474144 2.031047354 1.636945857 1.484579154 1.966076094 1.790731259 1.530824623 1 16.16456021 -10.40391397 0.132546157 5.55E-12 2.46314451 0.684765221 0.202935105 20.16097654 0.576568545 9.455757182 2.308715336 3.95E-11 10.40391397 2.46314451 HIVSNDS(ph)SDSDDESHEPK ddPTM_A459_MK2206_30min_R2 1 HIVSNDSSDSDDESHEPK 18 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 HIVS(0.203)NDS(0.487)S(0.307)DS(0.003)DDESHEPK 129.02 0.00043038 11125000 55920 75083 69694 70801 54946 46509 62230 53439 46688 35636 TRUE FALSE 60201.2782 71354.4874 72017.56318 65016.33182 52788.54396 48278.93259 54059.12625 60423.66078 50748.83785 34473.20024 1.746321136 2.069853884 2.089088413 1.885996408 1.531292238 1.400477248 1.568149341 1.752772019 1.47212436 1 15.07318761 -6.224099783 3.54510773 1.490565198 1.979073429 0.593019626 0.199890926 0.176593795 4.661496257 0.060847542 0.077535297 5.97E-07 6.224099783 0.48850823 HIVSNDSS(ph)DSDDESHEPK ddPTM_A459_MK2206_30min_R2 2 HIVSNDSSDSDDESHEPK 18 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 HIVS(0.001)NDS(0.148)S(0.825)DS(0.022)DDES(0.002)HEPK;HIVS(0.091)NDS(0.048)S(0.858)DS(0.003)DDESHEPK 138.82 0.00021934 21811000 83822 119813 106599 122188 88736 89967 118730 78382 67381 53567 TRUE FALSE 90239.47677 113863.2606 110152.9575 112204.8495 85251.77878 93390.75723 103140.6084 88626.79653 73241.67758 51819.11318 1.741432287 2.197321677 2.125720621 2.165317827 1.645180196 1.802245378 1.990397019 1.710310947 1.413410479 1 15.66119671 -8.532247463 0.557805822 0.967494286 2.030704143 0.755511051 0.175111706 0.484299827 0.358632324 0.200918294 0.090261525 2.94E-09 8.532247463 1.063209857 HIVSNDSSDS(ph)DDESHEPK ddPTM_A459_MK2206_30min_R1 1 HIVSNDSSDSDDESHEPK 18 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 HIVS(0.056)NDS(0.081)S(0.051)DS(0.811)DDESHEPK 119.38 0.00064597 7789900 2994.5 2988.8 2962 2621.7 3100.7 2209.9 3252.7 2728.3 3206.2 3490.7 TRUE FALSE 2739.80205 2794.228577 2760.947693 2823.623788 2977.192553 2335.022628 3035.718318 2704.446761 3539.495963 3923.154269 0.698367146 0.712240301 0.703757105 0.71973305 0.758877258 0.595190112 0.773795296 0.689355191 0.902206674 1 11.93779835 -8.410101541 2.990963296 0.998669729 0.70648661 0.82614162 0.045830992 0.087396852 1.49097185 0.041372814 0.011143598 3.89E-09 8.410101541 -0.292183119 HIVSNDSSDS(ph)DDESHEPK ddPTM_A459_MK2206_30min_R2 1 HIVSNDSSDSDDESHEPK 18 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 HIVS(0.051)NDS(0.037)S(0.027)DS(0.642)DDES(0.243)HEPK 92.01 0.0034085 12982000 22948 33765 31918 35925 26131 23820 34373 22229 18473 18627 TRUE FALSE 24704.91652 32088.2792 32982.13019 32989.81258 25104.96564 24726.48679 29859.78381 25134.40662 20079.74815 18019.20252 1.371032736 1.780782428 1.830387897 1.830814241 1.393234002 1.372229807 1.657109064 1.39486787 1.114352765 1 14.13724754 -8.084214863 0.596117122 0.974426361 1.683012437 0.608360489 0.173625915 0.53663863 0.436875583 0.183475888 0.092231265 8.24E-09 8.084214863 0.708586076 HIYDTK ddPTM_A459_MK2206_30min_R2 1 HIYDTK 6 0 A0A087X1X5;B4DDF4;B4DUT8;Q99439-2;Q99439 A0A087X1X5 CNN2 Calponin;Calponin-2 0 143.18 0.01451 2152100 35577 37953 36371 38218 41939 33752 40028 42339 41964 40497 FALSE TRUE 38300.80247 36068.30921 37583.59099 35095.46715 40292.26413 35036.45601 34772.27552 47872.85267 45613.95287 39175.58621 0.977670181 0.920683331 0.959362568 0.895850466 1.028504434 0.894344141 0.887600643 1.222007309 1.164346403 1 15.25766724 -7.756941934 24.9999941 1.144882655 0.938107383 0.632657251 0.066379297 61.74739188 343241.4512 0.030960441 0.017099348 1.75E-08 7.756941934 -0.206775272 HIYYITGETK ddPTM_A459_MK2206_30min_R1 3 HIYYITGETK 10 0 P07900;P07900-2;Q58FG0 P07900 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 ;; 234.05 2.97E-05 67967000 16595.1 17263 17192.6 17059.3 17170.1 15307.4 17813.1 17403.1 15585.3 14960.3 FALSE TRUE 15183.5996 16139.17556 16025.61421 18373.21024 16486.17856 16174.09176 16624.8206 17250.94653 17205.44771 16813.69491 0.903049549 0.959882741 0.953128643 1.092752684 0.980520858 0.961959394 0.988766639 1.026005683 1.023299626 1 14.03734918 -5.170306005 1.914632602 1.006680466 0.910398953 0.437180679 0.036565976 0.419570426 2.601439316 0.01061434 0.05386729 6.76E-06 5.170306005 -0.096281513 HIYYITGETK ddPTM_A459_MK2206_30min_R2 1 HIYYITGETK 10 0 P07900;P07900-2;Q58FG0 P07900 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 109.42 0.014164 25813000 225780 289840 246670 287770 252410 245220 286280 218390 223740 249770 FALSE TRUE 243065.8904 275446.9671 254893.8547 264258.2705 242499.1151 254552.0189 248691.0921 246934.3228 243200.5008 241620.0254 1.005984045 1.140000572 1.054936793 1.09369358 1.003638315 1.053522027 1.029265235 1.021994441 1.006541161 1 17.8823805 -6.736477724 0.717189964 1.008749421 1.078868028 0.308870266 0.036159163 0.816802541 0.925518959 0.02491291 0.025773819 1.83E-07 6.736477724 0.070118607 HKAEEVEDETVELDVS(ph)DEEMAR ddPTM_A459_MK2206_30min_R1 3 HKAEEVEDETVELDVSDEEMAR 22 1 H3BSB3;H3BNT4;Q99547 H3BSB3 MPHOSPH6 M-phase phosphoprotein 6 1 HKAEEVEDET(0.001)VELDVS(0.999)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR 146 2.48E-07 13760000 7051.4 8330.4 7106.6 6588.2 6639.1 6201.3 6774.9 6437.7 7504.2 5742.1 TRUE FALSE 6451.641402 7788.089446 6624.223792 7095.624306 6374.650588 6552.412247 6322.958783 6381.415868 8284.288444 6453.474699 0.999715921 1.206805606 1.026458474 1.099504474 0.987785788 1.015330896 0.979775869 0.988834103 1.283694263 1 12.65586043 -4.469715552 22.82603521 1.060846459 0.000264633 0.036870459 0.098240639 944.3195326 728139.5159 0.023221682 138689.825 3.39E-05 4.469715552 -1.060581826 HKS(ph)DNETNLQQQVVWGNR ddPTM_A459_MK2206_30min_R2 2 HKSDNETNLQQQVVWGNR 18 1 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 HKS(1)DNETNLQQQVVWGNR;HKS(1)DNETNLQQQVVWGNR 123.63 0.0004859 10961600 22993 24104 19020.1 28723 26998 24064 29402 16636 24379 19578.9 TRUE FALSE 24753.36176 22907.03041 19654.22064 26376.23902 25937.92287 24979.77238 25541.48208 18810.38232 26499.44135 18940.0421 1.306932774 1.209449815 1.037707337 1.392617761 1.36947546 1.318886846 1.348544103 0.993154198 1.399122622 1 14.20915192 -10.54146295 6.066163786 0.999999933 1.258750243 0.251715996 0.136278264 5.33E-07 8.62E-08 0.132398545 0.032111328 2.87E-11 10.54146295 0.25875031 HKSESPCES(ph)PYPNEK ddPTM_A459_MK2206_30min_R2 1 HKSESPCESPYPNEK 15 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H0Y594;B7ZBA0;B7ZB98 A0A0C4DG98 THOC2 THO complex subunit 2 1 HKS(0.001)ES(0.012)PCES(0.978)PY(0.009)PNEK 72.209 0.019974 6654500 20668 39442 23859 48364 51263 51029 54688 42541 34985 37930 TRUE FALSE 22250.35797 37483.36763 24654.44715 44412.50649 49250.15704 52970.94435 47507.39991 48101.25477 38027.93206 36692.34721 0.606403233 1.021558186 0.671923413 1.210402437 1.342246021 1.443651017 1.294749547 1.310934253 1.036399548 1 15.16319158 -5.824367544 6.403980586 1.265937364 0.793009186 0.627826597 0.163479378 0.12226398 9.432516578 0.044850519 0.067649628 1.50E-06 5.824367544 -0.472928178 HLAAVEER ddPTM_A459_MK2206_30min_R2 1 HLAAVEER 8 0 Q92922;Q8TAQ2;F8VXC8;Q8TAQ2-2;Q8TAQ2-3 Q92922;Q8TAQ2 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 0 95.815 0.030323 1428300 2040.9 3225.2 3622.7 3866.4 2518.3 4902.8 5066.1 3326.6 4301.7 2649.5 FALSE TRUE 2197.152873 3065.041258 3743.47901 3550.502752 2419.418889 5089.37949 4400.914985 3761.398042 4675.85409 2563.047032 0.857242511 1.195858375 1.460558064 1.385266329 0.943961956 1.985675419 1.717063686 1.467549364 1.824334096 1 11.32364424 -6.753704306 24.99996006 1.63553006 1.198352498 0.338819127 0.296947531 202.3417906 653973.3308 0.096783962 0.095060242 1.76E-07 6.753704306 -0.437177563 HLAESESLLT(ph)SPPK ddPTM_A459_MK2206_30min_R1 1 HLAESESLLTSPPK 14 0 Q14669;Q14669-2;Q14669-3;Q14669-4 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 HLAESESLLT(0.582)S(0.418)PPK 97.2 0.015268 5111000 3680.5 3712.1 4076.8 2828.1 2646 2577.3 3264.8 2615.4 4166.2 3595.3 TRUE FALSE 3367.454148 3470.441615 3800.078175 3045.920752 2540.604217 2723.224499 3047.011149 2592.533834 4599.291399 4040.712907 0.833381194 0.858868644 0.940447456 0.753807762 0.628751479 0.673946544 0.754077614 0.641603077 1.138237609 1 11.98039414 -8.267315851 24.99966203 1.069118838 0.762151692 0.613280057 0.097987033 379.3361825 1613745.056 0.095528299 0.027303143 5.40E-09 8.267315851 -0.306967145 HLAESESLLT(ph)SPPK ddPTM_A459_MK2206_30min_R2 1 HLAESESLLTSPPK 14 0 Q14669;Q14669-2;Q14669-3;Q14669-4 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 HLAESESLLT(0.629)S(0.371)PPK 109.79 0.0060398 22692000 88581 69436 69765 63547 69787 51576 98374 64090 56477 92324 TRUE FALSE 95362.82947 65987.90921 72090.93028 58355.00682 67046.81173 53538.76082 85457.37563 72466.78305 61389.26737 89311.47544 1.067755616 0.738851406 0.807185526 0.653387558 0.750707693 0.599461162 0.956846533 0.811393863 0.687361474 1 16.44655794 -10.05810729 17.51396005 1 0.780490771 0.189365342 0.132480541 0 0 0.125966712 0.030551415 8.75E-11 10.05810729 -0.219509229 HLAESESLLTS(ph)PPK ddPTM_A459_MK2206_30min_R1 4 HLAESESLLTSPPK 14 0 Q14669;Q14669-2;Q14669-3;Q14669-4 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 HLAESESLLT(0.151)S(0.848)PPK;HLAESESLLT(0.017)S(0.983)PPK;HLAES(0.001)ES(0.003)LLT(0.175)S(0.821)PPK;HLAESESLLT(0.225)S(0.775)PPK 121.95 0.0012203 73532700 16333.6 17724.2 18327.3 14423.5 12751.4 12729.9 15485.8 13298.2 17668.5 17515.4 TRUE FALSE 14944.34155 16570.35136 17083.29394 15534.40047 12243.48474 13450.65594 14452.77054 13181.93524 19505.2038 19685.33999 0.759160957 0.841760994 0.867818079 0.789135493 0.621959526 0.683282887 0.734189531 0.669632084 0.990849222 1 14.26483401 -8.273851391 24.38758267 0.995424725 0.747965507 0.659576106 0.071701928 425.4825848 835992.1081 0.076608482 0.020382757 5.32E-09 8.273851391 -0.247459217 HLAESESLLTS(ph)PPK ddPTM_A459_MK2206_30min_R2 2 HLAESESLLTSPPK 14 0 Q14669;Q14669-2;Q14669-3;Q14669-4 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 HLAESESLLT(0.233)S(0.767)PPK;HLAESESLLT(0.224)S(0.776)PPK 110.57 0.0027829 44457000 76902 71866 70195 70395 69626 57363 98847 66943 50267 82096 TRUE FALSE 82789.67625 68297.23894 72535.26627 64643.50332 66892.1334 59545.98916 85868.27016 75692.67995 54639.1328 79417.21424 1.042465126 0.85998029 0.91334438 0.813973443 0.842287583 0.749786929 1.081229945 0.953101675 0.688001126 1 16.27716414 -4.757862099 24.79861916 0.876838746 1.042465386 0.167107875 0.110147631 174.1555337 1207086.965 0.027154925 0.194382578 1.75E-05 4.757862099 0.16562664 HLAGEVAK ddPTM_A459_MK2206_30min_R2 1 HLAGEVAK 8 0 Q13200;Q13200-3 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 90.657 0.039285 1261600 9923.9 12086 12761 10339 12175 7886.2 11858 14517 12354 10824 FALSE TRUE 10683.68141 11485.82681 13186.44537 9494.270627 11696.94833 8186.314867 10301.03036 16414.42174 13428.52859 10470.81377 1.020329618 1.09693736 1.259352488 0.906736653 1.117100217 0.78182222 0.98378508 1.567635726 1.282472298 1 13.35408595 -7.73087078 24.99936004 1.318790817 1.025389895 0.308884343 0.175584532 204.1759172 166977.5747 0.081692415 0.047157959 1.86E-08 7.73087078 -0.293400922 HLAPPPLLS(ph)PLLPSIKPTVR ddPTM_A459_MK2206_30min_R1 1 HLAPPPLLSPLLPSIKPTVR 20 1 Q14676-3;Q14676;Q14676-2;H0Y6Z8 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 HLAPPPLLS(1)PLLPSIKPTVR 65.105 0.007387 1781300 2441.7 2073.3 2123.4 1842.8 1903.2 1741.2 2242.1 1812.9 1536 1214 TRUE FALSE 2234.020593 1938.327793 1979.269524 1984.732775 1827.391514 1839.785239 2092.5336 1797.050006 1695.672697 1364.399485 1.637365462 1.420645357 1.4506525 1.454656643 1.339337587 1.348421235 1.533666366 1.317099593 1.242797813 1 10.4140504 -13.14591958 0.12000473 2.18E-13 1.649819946 0.76940474 0.079137873 51.67837757 0.558757945 13.63388444 0.860890404 7.15E-14 13.14591958 1.649819946 HLDGEEDGS(ph)SDQSQASGTTGGR ddPTM_A459_MK2206_30min_R1 2 HLDGEEDGSSDQSQASGTTGGR 22 0 Q5H909;Q9UNF1-2;Q9UNF1;Q5H907 Q5H909 MAGED2 Melanoma-associated antigen D2 1 HLDGEEDGS(0.789)S(0.211)DQSQASGTTGGR;HLDGEEDGS(0.77)S(0.23)DQSQASGTTGGR 234.62 4.31E-31 8921800 1580.58 1777.38 1489.02 1307.3 1672.5 1196.64 1409.55 1540.36 1418.51 1289.21 TRUE FALSE 1446.143371 1661.672239 1387.949471 1407.988473 1605.880783 1264.392723 1315.521491 1526.892795 1565.969191 1448.927068 0.998078787 1.146829455 0.957915344 0.971745579 1.108324097 0.872640694 0.907928025 1.053809283 1.080778478 1 10.50076926 -4.424812792 19.86014662 1.009328868 0.001168894 0.001800814 0.083005235 3681.575311 747900.5914 0.020740309 520.3067753 3.76E-05 4.424812792 -1.008159974 HLDGEEDGS(ph)SDQSQASGTTGGR ddPTM_A459_MK2206_30min_R2 1 HLDGEEDGSSDQSQASGTTGGR 22 0 Q5H909;Q9UNF1-2;Q9UNF1;Q5H907 Q5H909 MAGED2 Melanoma-associated antigen D2 1 HLDGEEDGS(0.968)S(0.032)DQSQASGTTGGR 189.09 7.29E-22 18442000 11991 16831 15684 18792 16609 16226 19556 13048 13657 5252.3 TRUE FALSE 12909.04018 15995.19701 16206.89673 17256.63349 15956.84721 16843.4918 16988.27371 14753.4184 14844.86117 5080.917881 2.540690576 3.148092016 3.18975766 3.396361423 3.140544205 3.315049012 3.343544239 2.903691566 2.92168886 1 12.31087343 -9.2029262 1.154860036 0.996112378 3.159753761 0.88063173 0.2332379 1.18332177 1.735360205 0.234652298 0.069507197 6.27E-10 9.2029262 2.163641383 HLDMVLPEVASSCGPST(ph)SPSNTSPEAGPSSQPK ddPTM_A459_MK2206_30min_R2 1 HLDMVLPEVASSCGPSTSPSNTSPEAGPSSQPK 33 0 Q92551-2;Q92551 Q92551-2 IP6K1 Inositol hexakisphosphate kinase 1 1 HLDMVLPEVAS(0.006)S(0.016)CGPS(0.126)T(0.391)S(0.391)PS(0.057)NT(0.009)S(0.004)PEAGPSSQPK 84.221 9.94E-08 4497300 22821 25433 20444 24299 28078 26512 25341 21698 23617 26753 TRUE FALSE 24568.19331 24170.0342 21125.59276 22313.69397 26975.51664 27520.93274 22013.69626 24534.0031 25671.16397 25880.0518 0.949310051 0.933925264 0.816288658 0.86219665 1.042328541 1.06340331 0.850604799 0.947988949 0.991928616 1 14.65955288 -6.245153818 24.78336521 0.977537988 0.888241125 0.331019724 0.063983915 1003.381866 1526946.125 0.020493971 0.026373386 5.69E-07 6.245153818 -0.089296863 HLDMVLPEVASSCGPSTS(ph)PSNTSPEAGPSSQPK ddPTM_A459_MK2206_30min_R2 1 HLDMVLPEVASSCGPSTSPSNTSPEAGPSSQPK 33 0 Q92551-2;Q92551 Q92551-2 IP6K1 Inositol hexakisphosphate kinase 1 1 HLDMVLPEVAS(0.143)S(0.041)CGPS(0.143)T(0.143)S(0.46)PS(0.046)NT(0.004)S(0.018)PEAGPS(0.001)S(0.001)QPK 62.213 0.00028071 3581800 6621.6 7303 9183.4 7665.8 6934.5 8274.6 6989.7 5114 7316.7 8482 TRUE FALSE 7128.554787 6940.34364 9489.569973 7039.479618 6662.216687 8589.495701 6071.943994 5782.417359 7953.09334 8205.233035 0.868781515 0.845843574 1.156526565 0.857925618 0.811947285 1.046831414 0.74000872 0.704723112 0.969270867 1 13.00232859 -7.271837917 24.97866362 0.828894277 0.928900501 0.067326564 0.129325732 1625.072405 3903623.806 0.053573025 0.036558493 5.35E-08 7.271837917 0.100006223 HLDS(ph)PPAIPPR ddPTM_A459_MK2206_30min_R2 2 HLDSPPAIPPR 11 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 HLDS(1)PPAIPPR;HLDS(1)PPAIPPR 103.14 0.0075859 0 20875.9 18610.8 17919.4 20656.3 17317.9 14193.1 21360.7 15804.1 13339.4 14884.5 TRUE FALSE 22474.17495 17686.61473 18516.82385 18968.61421 16637.91223 14733.22837 18556.01443 17869.75013 14499.6369 14398.81998 1.560834498 1.228337791 1.285995927 1.317372829 1.15550526 1.023224707 1.288717718 1.241056569 1.007001748 1 13.81366296 -1.522878745 0.302527715 1.089687682 4.43958311 0.587273447 0.105767012 44.44647641 0.633828573 0.10976375 80.80745075 0.03 1.522878745 3.349895428 HLDVPDIIITPPT(ph)PTGMMLPR ddPTM_A459_MK2206_30min_R2 1 HLDVPDIIITPPTPTGMMLPR 21 0 R4GN89;R4GMY0;Q96GX8 R4GN89 C16orf74 Uncharacterized protein C16orf74 1 HLDVPDIIIT(0.001)PPT(0.5)PT(0.5)GMMLPR 76.909 0.0036846 6035700 29875 23265 22993 25128 22860 30740 35962 17468 45140 27460 TRUE FALSE 32162.25297 22109.69393 23759.57514 23074.96202 21962.40154 31909.83224 31240.1462 19751.12758 49066.19561 26563.98245 1.210746658 0.832318496 0.894428205 0.868655973 0.82677368 1.20124429 1.176033987 0.743530365 1.847094866 1 14.69718383 -7.517685489 1.008983522 1.272122385 0.931456714 0.165069314 0.281586276 0.975979365 1.838181489 0.21946556 0.103015448 3.04E-08 7.517685489 -0.340665671 HLEFSHDQYR ddPTM_A459_MK2206_30min_R1 3 HLEFSHDQYR 10 0 Q9NR45 Q9NR45 NANS Sialic acid synthase 0 ;; 154.85 0.00030547 32266900 4686.1 4947.3 4838.3 4511.8 5315.7 4799.3 5441.3 4069.4 4493.2 3965.7 FALSE TRUE 4287.522587 4625.229871 4509.889676 4859.299618 5103.964413 5071.032219 5078.320805 4033.821665 4960.284219 4457.000856 0.961974818 1.037744892 1.01186646 1.090262213 1.145156705 1.137767836 1.139403148 0.905052926 1.112919737 1 12.12185752 -5.119047011 1.375682542 1.077598194 0.962724608 0.169285163 0.072351938 1.375764785 3.554388076 0.022849011 0.185354291 7.60E-06 5.119047011 -0.114873586 HLEFSHDQYR ddPTM_A459_MK2206_30min_R2 2 HLEFSHDQYR 10 0 Q9NR45 Q9NR45 NANS Sialic acid synthase 0 ; 126.39 0.0019544 29160000 35452 47050 43418 39680 39157 37973 43188 39636 36857 40701 FALSE TRUE 38166.23238 44713.56542 44865.53445 36438.01707 37619.49943 39418.08912 37517.36372 44816.56129 40062.75524 39372.9297 0.969352107 1.135642325 1.139502059 0.925458617 0.955466096 1.001146966 0.952872037 1.13825823 1.0175203 1 15.26491645 -5.752020458 24.99986701 1.000829582 1.086913166 0.228744483 0.06940123 303.409106 805305.5733 0.019707237 0.03356626 1.77E-06 5.752020458 0.086083584 HLEINPDHPIVETLR ddPTM_A459_MK2206_30min_R1 3 HLEINPDHPIVETLR 15 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;; 152.11 0.00013167 50404400 4804 4803.6 4722.5 4157.37 4697.5 4296.82 5089.7 3938.64 4520.3 4684.7 FALSE TRUE 4395.394573 4490.884767 4401.949858 4477.571358 4510.388628 4540.102235 4750.1754 3904.204886 4990.201361 5265.076004 0.834820726 0.852957253 0.836065777 0.850428627 0.856661637 0.862305166 0.902204526 0.741528685 0.947792844 1 12.36223864 -8.509908029 22.46138145 1.000000007 0.845651905 0.66361214 0.038371582 84.92312617 147060.701 0.034737882 0.008969282 3.09E-09 8.509908029 -0.154348102 HLEINPDHPIVETLR ddPTM_A459_MK2206_30min_R2 3 HLEINPDHPIVETLR 15 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;; 98.421 0.0050152 91856100 219073 238771 220160 258024 202049 241946 254982 191313 191796 220488 FALSE TRUE 235845.3973 226913.9793 227500.0245 236942.6138 194115.541 251153.4246 221502.5571 216318.266 208478.0694 213293.4946 1.105731789 1.063857947 1.066605547 1.110875952 0.910086552 1.177501569 1.038487168 1.014181264 0.977423478 1 17.70248044 -7.738790796 3.232298738 0.99317893 1.068568925 0.214394782 0.06402001 0.393347468 8.426082212 0.035818993 0.01724132 1.82E-08 7.738790796 0.075389995 HLEINPDHSIIETLR ddPTM_A459_MK2206_30min_R1 2 HLEINPDHSIIETLR 15 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 185.66 1.21E-05 159029000 4960.7 4810.7 4741.1 3851.5 4995.5 4089.2 5311 4416 4589.6 4077.7 FALSE TRUE 4538.766415 4497.522556 4419.287341 4148.143197 4796.518657 4320.72697 4956.71288 4377.391378 5066.705344 4582.876261 0.990375074 0.981375516 0.964304312 0.90513969 1.046617535 0.942798087 1.081572488 0.955162463 1.105573237 1 12.16203762 -7.01076208 1.358442371 1.031472469 0.967737212 0.210144765 0.053245915 0.676466216 2.53811524 0.026849599 0.019447122 9.76E-08 7.01076208 -0.063735257 HLEINPDHSIIETLR ddPTM_A459_MK2206_30min_R2 2 HLEINPDHSIIETLR 15 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 134.4 0.00025631 60952000 64840 63439 71501 79321 65641 65440 67340 58137 48999 64015 FALSE TRUE 69804.20025 60288.71151 73884.80765 72840.22056 63063.60452 67930.36506 58498.17711 65735.70551 53260.84445 61926.19579 1.127216025 0.973557486 1.193110714 1.176242455 1.018367166 1.096956856 0.94464348 1.061516934 0.860069697 1 15.9182622 -7.174695577 1.270917149 0.960263349 1.106194685 0.393895955 0.078241704 0.498908013 1.593951691 0.047342678 0.029397452 6.69E-08 7.174695577 0.145931336 HLEMNPHFGSHR ddPTM_A459_MK2206_30min_R1 1 HLEMNPHFGSHR 12 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 81.709 0.021277 6013400 1337.9 938.75 962.95 969.11 1518.3 1555 1537.8 1301 1098.4 682.39 FALSE TRUE 1224.104579 877.6372044 897.5876369 1043.75102 1457.822896 1643.042756 1435.216168 1289.625494 1212.582611 766.929625 1.596110698 1.144351679 1.17036506 1.360947584 1.900856152 2.14236444 1.871379226 1.681543459 1.581087196 1 9.582950389 -6.165339027 5.498378912 1.760313426 1.286372937 0.255807634 0.304305985 0.261307676 11.95827381 0.089473614 0.116375305 6.83E-07 6.165339027 -0.473940489 HLFS(ph)STENLAAGSWKEPAEGGGLSSDR ddPTM_A459_MK2206_30min_R1 1 HLFSSTENLAAGSWKEPAEGGGLSSDR 27 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.357)S(0.321)T(0.321)ENLAAGSWKEPAEGGGLSSDR 44.625 0.025687 73675000 4832.4 3730.6 3781.3 3523.3 4825.4 4633.4 5023.7 4676.5 2851.5 2712.9 TRUE FALSE 4421.379004 3487.737262 3524.635891 3794.665176 4633.1941 4895.739104 4688.578139 4635.613854 3147.923629 3048.994533 1.450110506 1.143897512 1.155999413 1.244562801 1.51958098 1.605689696 1.537745669 1.520374603 1.032446465 1 11.57411785 -2.147001395 15.9460246 1.3433076 41.88773081 0 0.218992339 0 0 0.051958569 0 0.007128507 2.147001395 40.54442321 HLFS(ph)STENLAAGSWKEPAEGGGLSSDR ddPTM_A459_MK2206_30min_R2 2 HLFSSTENLAAGSWKEPAEGGGLSSDR 27 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.36)S(0.31)T(0.31)ENLAAGS(0.02)WKEPAEGGGLSSDR;HLFS(0.331)S(0.331)T(0.331)ENLAAGS(0.008)WKEPAEGGGLSSDR 62.082 0.0017903 28568000 14671.8 29764 24733 33774 30348 28266 29933 17118.1 36365 28510 TRUE FALSE 15795.08429 28285.96304 25557.58588 31014.55616 29156.38503 29341.68244 26002.76114 19355.49445 39527.96197 27579.72103 0.572706456 1.025607293 0.926680362 1.124542055 1.057167511 1.063886121 0.942821761 0.701801676 1.433225591 1 14.75132024 -4.761012377 24.90911306 1.020128047 0.572705939 0.383879289 0.173584024 10.24829806 597116.2743 0.040916361 0.233701929 1.73E-05 4.761012377 -0.447422108 HLFSS(ph)TENLAAGSWK ddPTM_A459_MK2206_30min_R1 2 HLFSSTENLAAGSWK 15 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.005)S(0.923)T(0.073)ENLAAGSWK;HLFS(0.006)S(0.919)T(0.075)ENLAAGSWK 276.34 3.40E-46 104918000 4891.9 4550.8 4438.9 3388.8 4322.2 4572.7 5203.5 3736.4 4613 5503.4 TRUE FALSE 4475.818217 4254.542093 4137.599835 3649.805963 4150.037622 4831.602322 4856.384009 3703.733049 5092.537858 6185.202741 0.723633227 0.687858147 0.668951368 0.590086714 0.670962262 0.781155045 0.785161653 0.59880544 0.823342107 1 12.59460517 -9.88731916 0.40761882 1.07084271 0.672896635 0.659168565 0.067327802 4.525306064 0.780316692 0.523242574 0.046137967 1.30E-10 9.88731916 -0.397946074 HLFSS(ph)TENLAAGSWK ddPTM_A459_MK2206_30min_R2 2 HLFSSTENLAAGSWK 15 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.111)S(0.777)T(0.111)ENLAAGSWK;HLFS(0.066)S(0.742)T(0.191)ENLAAGSWK 248.18 4.30E-28 119312000 434880 378470 401020 451400 364630 390630 452740 344880 343320 437250 TRUE FALSE 468174.7472 359675.7301 414389.8066 414519.176 350312.7941 405495.6984 393294.6942 389957.0002 373181.353 422982.5683 1.106841705 0.850332276 0.979685305 0.979991156 0.828196763 0.958658178 0.929813008 0.921922153 0.882261779 1 18.69023868 -4.746357173 24.97685502 0.924714017 1.106842197 0.499638672 0.054389165 673.7081206 1115630.093 0.012912323 0.296948581 1.79E-05 4.746357173 0.182128179 HLFSS(ph)TENLAAGSWKEPAEGGGLSSDR ddPTM_A459_MK2206_30min_R1 1 HLFSSTENLAAGSWKEPAEGGGLSSDR 27 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.133)S(0.377)T(0.377)ENLAAGS(0.113)WKEPAEGGGLSSDR 56.461 0.0046805 56179000 1408.6 1285.7 1654.7 1099.2 1544.6 1243.8 1523.7 1469.7 1197.5 819.26 TRUE FALSE 1288.791173 1202.000696 1542.383574 1183.860574 1483.075311 1314.222881 1422.056753 1456.850568 1321.98441 920.7561139 1.399709601 1.305449595 1.67512716 1.285748263 1.610714595 1.427330062 1.54444454 1.582232847 1.435759579 1 9.846675262 -8.569986824 21.08707758 0.999999999 1.479971146 0.580763959 0.12132077 2841.908554 1272127.094 0.11144588 0.028775203 2.69E-09 8.569986824 0.479971147 HLFSS(ph)TENLAAGSWKEPAEGGGLSSDR ddPTM_A459_MK2206_30min_R2 2 HLFSSTENLAAGSWKEPAEGGGLSSDR 27 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.153)S(0.674)T(0.173)ENLAAGSWKEPAEGGGLSSDR;HLFS(0.138)S(0.576)T(0.285)ENLAAGS(0.001)WKEPAEGGGLSSDR 117.01 4.58E-12 17777200 20893.8 36417 27659 41498 40448 32335 36925 27447 39952 24477 TRUE FALSE 22493.44539 34608.58474 28581.13726 38107.48065 38859.80829 33565.53108 32076.70315 31034.41714 43426.95274 23678.31749 0.949959616 1.46161503 1.207059465 1.609382958 1.641155808 1.417564026 1.354686757 1.310668173 1.834038789 1 14.53127895 -5.74249698 24.90544289 1.467773518 1.231751613 0.176917233 0.239983822 414.4850318 544959.8037 0.062318049 0.10770964 1.81E-06 5.74249698 -0.236021905 HLFSST(ph)ENLAAGSWKEPAEGGGLSSDR ddPTM_A459_MK2206_30min_R1 1 HLFSSTENLAAGSWKEPAEGGGLSSDR 27 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.018)S(0.216)T(0.766)ENLAAGSWKEPAEGGGLSSDR 102.27 9.01E-07 58305000 1388.7 1279.5 1589.4 1458.1 1779.6 1624 1353.5 1641.1 1005.7 1084.2 TRUE FALSE 1270.583773 1196.204317 1481.515956 1570.403115 1708.714764 1715.949477 1263.210485 1626.752036 1110.246114 1218.518881 1.042728014 0.981687142 1.215833402 1.288780288 1.402288294 1.408225595 1.036676989 1.33502407 0.911143956 1 10.25091289 -8.271795139 24.90810699 0.955571933 1.215574103 0.334771814 0.145648575 947.7224639 2279475.719 0.14602081 0.039381214 5.35E-09 8.271795139 0.26000217 HLGGSGSVVPGS(ph)PCLDR ddPTM_A459_MK2206_30min_R1 1 HLGGSGSVVPGSPCLDR 17 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 HLGGSGSVVPGS(1)PCLDR 86.748 0.0072807 6551800 2799.2 1827.3 1952.4 1122.8 3626.8 2853.1 3184.1 2444.3 1871.9 1805.6 TRUE FALSE 2561.113341 1708.342438 1819.876528 1209.278251 3482.336876 3014.640056 2971.694499 2422.929743 2066.490704 2029.29136 1.262072757 0.841841872 0.89680396 0.595911595 1.716035925 1.485562949 1.464400114 1.193978248 1.018331199 1 10.9867603 -6.25526248 24.99473677 1.338943331 0.894895472 0.386851268 0.253998851 523.2986751 2117519.837 0.078043781 0.098180422 5.56E-07 6.25526248 -0.444047859 HLGGSGSVVPGS(ph)PCLDR ddPTM_A459_MK2206_30min_R2 5 HLGGSGSVVPGSPCLDR 17 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 HLGGSGSVVPGS(1)PCLDR;HLGGSGSVVPGS(1)PCLDR;HLGGSGS(0.001)VVPGS(0.999)PCLDR;HLGGSGSVVPGS(1)PCLDR;HLGGSGSVVPGS(1)PCLDR 128.82 0.00098564 42259200 76246.7 159616 135607 206954 165837 195302 165534 108658.9 159532 111239 TRUE FALSE 82084.20598 151689.7015 140128.0697 190045.1962 159325.4061 202734.3545 143799.187 122860.9913 173407.805 107609.2805 0.762798576 1.409634009 1.302193166 1.766066971 1.480591686 1.883985781 1.336308414 1.141732299 1.611457712 1 16.71544298 -4.521198112 1.992932256 1.471252922 0.040481786 0.377748841 0.256409888 2.024238669 4.556987362 0.067638946 6.801553748 3.01E-05 4.521198112 -1.430771136 HLIPAANTGESK ddPTM_A459_MK2206_30min_R1 1 HLIPAANTGESK 12 0 P62258;P62258-2 P62258 YWHAE 14-3-3 protein epsilon 0 124.1 0.031902 0 3247.8 3408.9 3365.8 2983.2 2769.1 2968 3318.4 2924.6 2742.7 2934.9 FALSE TRUE 2971.557555 3186.97999 3137.338874 3212.966581 2658.800883 3136.045595 3097.035591 2899.030531 3027.81348 3298.497569 0.900882142 0.966191402 0.951141787 0.974069713 0.806064224 0.950749706 0.938923108 0.878894245 0.917937157 1 11.68759333 -4.429631524 16.48618436 0.927024555 0.000105093 0.023602623 0.0523348 4427473.299 8867857.212 0.012890094 149679414.8 3.72E-05 4.429631524 -0.926919463 HLLAPGPQDIY(ph)DVPPVR ddPTM_A459_MK2206_30min_R1 1 HLLAPGPQDIYDVPPVR 17 0 P56945-6;A0A2R8Y6M6;A0A2R8Y5C9;A0A2R8Y8C4;A0A2R8YFS8;A0A2R8Y5E4;A0A2R8Y4C2;A0A2R8YFK2;A0A2R8Y596;P56945;P56945-8;P56945-2;P56945-3;P56945-5;P56945-7;P56945-4;H3BN62 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 HLLAPGPQDIY(1)DVPPVR 145.7 0.0030206 7671100 3364.8 3257.1 2654.2 2851.2 2926.1 2842.9 3325.8 2916.6 2388.9 2483.4 TRUE FALSE 3078.606091 3045.062198 2474.040299 3070.799918 2809.547241 3003.862541 3103.94195 2891.100474 2637.234704 2791.062341 1.103023048 1.091004724 0.886415277 1.100226202 1.00662289 1.076243442 1.112100545 1.035842314 0.944885632 1 11.44659863 -8.138445433 5.738132238 0.973713124 1.051045506 0.195792424 0.064598131 0.382045357 15.90420746 0.045485896 0.016655503 7.27E-09 8.138445433 0.077332382 HLLAPGPQDIY(ph)DVPPVR ddPTM_A459_MK2206_30min_R2 1 HLLAPGPQDIYDVPPVR 17 0 P56945-6;A0A2R8Y6M6;A0A2R8Y5C9;A0A2R8Y8C4;A0A2R8YFS8;A0A2R8Y5E4;A0A2R8Y4C2;A0A2R8YFK2;A0A2R8Y596;P56945;P56945-8;P56945-2;P56945-3;P56945-5;P56945-7;P56945-4;H3BN62 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 HLLAPGPQDIY(1)DVPPVR 171.08 4.98E-06 3465200 26663 27953 30795 31982 35423 27757 31545 18966 22657 23046 TRUE FALSE 28704.33978 26564.89467 31821.68993 29368.96829 34032.11503 28813.31209 27403.10361 21444.92132 24627.66491 22294.01091 1.287535917 1.191570901 1.427364957 1.317347893 1.526513788 1.29242388 1.229168844 0.961914005 1.104676274 1 14.44436857 -7.55052372 2.862693464 1.024528655 1.344039178 0.705833182 0.091324051 0.151962959 2.530634862 0.050089359 0.02732586 2.81E-08 7.55052372 0.319510523 HLLGAEHGDEPR ddPTM_A459_MK2206_30min_R1 2 HLLGAEHGDEPR 12 0 U3KQC1;K7EIR0;A0A0A0MQU0;Q9BV38 U3KQC1 WDR18 WD repeat-containing protein 18 0 ; 151.79 0.00028944 6151600 1475.12 1499.85 1567.73 1391.92 1239.55 1334.26 1708.89 1263.38 1044.22 1129.19 FALSE TRUE 1349.653298 1402.209492 1461.316856 1499.12592 1190.176099 1409.804648 1594.893066 1252.334402 1152.770406 1269.082582 1.06348737 1.104900116 1.151474992 1.181267429 0.937823996 1.110884877 1.256729143 0.986802923 0.908349403 1 10.30957024 -7.977583423 24.86303243 0.951975137 1.112485301 0.427710284 0.080146441 194.4947273 215720.956 0.044711534 0.021476391 1.05E-08 7.977583423 0.160510164 HLLGAEHGDEPR ddPTM_A459_MK2206_30min_R2 2 HLLGAEHGDEPR 12 0 U3KQC1;K7EIR0;A0A0A0MQU0;Q9BV38 U3KQC1 WDR18 WD repeat-containing protein 18 0 ; 108.98 0.0044165 5567700 10359.2 13638.7 12809.2 12086.8 13159.9 12803.9 13488.7 11219.4 12782.8 10420.9 FALSE TRUE 11152.30832 12961.42199 13236.25233 11099.26978 12643.1762 13291.16139 11717.61749 12685.8141 13894.62484 10080.86689 1.106284652 1.285744781 1.313007352 1.101023345 1.254175494 1.31845421 1.162362088 1.25840508 1.378316468 1 13.29933209 -10.62320231 4.593920105 0.999984621 1.241955669 0.408082366 0.08742752 1.56E-05 3.06E-06 0.082818534 0.020084967 2.38E-11 10.62320231 0.241971048 HLLS(ph)PQLVQYQCGDSGK ddPTM_A459_MK2206_30min_R1 2 HLLSPQLVQYQCGDSGK 17 0 Q9P209 Q9P209 CEP72 Centrosomal protein of 72 kDa 1 HLLS(1)PQLVQYQCGDSGK;HLLS(1)PQLVQYQCGDSGK 227 2.25E-51 8125200 4599.4 4794.8 3818.7 3420.9 4261.8 3990.5 4784.1 4169.7 3723.9 3074.6 TRUE FALSE 4208.196878 4482.657649 3559.497284 3684.378311 4092.043481 4216.438661 4464.961418 4133.244753 4111.012731 3455.50466 1.217824107 1.297251224 1.030094772 1.066234508 1.184210089 1.220209224 1.292130053 1.196133462 1.189699663 1 11.75468071 -10.52997915 5.666248682 0.999999557 1.187283078 0.330503117 0.080347557 4.92E-07 8.62E-08 0.085141929 0.020649902 2.95E-11 10.52997915 0.187283521 HLLS(ph)PQLVQYQCGDSGK ddPTM_A459_MK2206_30min_R2 7 HLLSPQLVQYQCGDSGK 17 0 Q9P209 Q9P209 CEP72 Centrosomal protein of 72 kDa 1 HLLS(1)PQLVQYQCGDSGK;HLLS(1)PQLVQYQCGDSGK;HLLS(1)PQLVQYQCGDSGK;HLLS(1)PQLVQYQCGDSGK;HLLS(0.836)PQLVQY(0.164)QCGDSGK;HLLS(1)PQLVQYQCGDSGK;HLLS(0.711)PQLVQY(0.289)QCGDSGK 137.87 0.00033761 76727800 428127.9 514446 458571.5 510723 542999 435791 543563 452972.2 414066.8 471509 TRUE FALSE 460905.7012 488899.3597 473860.0449 468995.2972 521678.1309 452375.3319 472192.5252 512177.2218 450081.5818 456123.6999 1.010484001 1.071856954 1.038884945 1.028219532 1.14372073 0.991782124 1.035229095 1.122891053 0.986753334 1 18.79906561 -10.08101458 13.05689791 1.000000089 1.050648522 0.075051974 0.049367452 0 0 0.0451349 0.010946821 8.30E-11 10.08101458 0.050648433 HLNEIDLFHCIDPNDSK ddPTM_A459_MK2206_30min_R1 2 HLNEIDLFHCIDPNDSK 17 0 A0A087WYT3;Q15185-4;Q15185;Q15185-3 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 0 ; 135.23 0.00029161 60870000 11321.4 12434.1 12558.5 11589.7 11482.7 10238.4 10883.6 11740.3 10871.5 9829.6 FALSE TRUE 10358.45548 11624.63783 11706.06401 12482.3407 11025.31974 10818.08936 10157.5749 11637.65579 12001.63133 11047.36506 0.937640372 1.05225434 1.059624983 1.129893023 0.998004473 0.979246119 0.919456798 1.053432718 1.086379536 1 13.43141469 HLNSSQPSGFGPANS(ph)LEDVVR ddPTM_A459_MK2206_30min_R1 1 HLNSSQPSGFGPANSLEDVVR 21 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 HLNSSQPSGFGPANS(1)LEDVVR 149.16 1.48E-06 6786200 1674.2 1322.2 1355 1072.3 1782.9 1524.3 1456.2 1466 1298.4 1030.5 TRUE FALSE 1531.800498 1236.12454 1263.026375 1154.888732 1711.883318 1610.604549 1359.059555 1453.182917 1433.373326 1158.16612 1.322608624 1.06731195 1.090539909 0.997170192 1.478098252 1.39065072 1.173458221 1.254727531 1.237623258 1 10.17762648 -2.960832045 11.16305886 1.208013357 1.32168919 0 0.15652752 0 0 0.037154903 0 0.00109438 2.960832045 0.113675833 HLNSSQPSGFGPANS(ph)LEDVVR ddPTM_A459_MK2206_30min_R2 1 HLNSSQPSGFGPANSLEDVVR 21 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 HLNSSQPSGFGPANS(1)LEDVVR 97.999 0.00022649 6549100 6604.2 13267 8766 13442 12089 13576 11650 7306.4 10066 9837.9 TRUE FALSE 7109.82263 12608.18007 9058.254065 12343.7456 11614.32512 14092.64419 10120.34101 8261.371567 10941.52248 9516.890129 0.747074153 1.324821439 0.9518082 1.297035632 1.220390796 1.480803498 1.063408411 0.868074702 1.149695156 1 13.2162745 -7.512158978 24.91383509 0.998479243 1.183502878 0.119694194 0.201652018 961.2064912 2233958.462 0.087089878 0.054559777 3.07E-08 7.512158978 0.185023635 HLPS(ph)PPLTQEVDLHSIAGPPVPPR ddPTM_A459_MK2206_30min_R1 1 HLPSPPLTQEVDLHSIAGPPVPPR 24 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 HLPS(0.953)PPLT(0.047)QEVDLHSIAGPPVPPR 88.768 3.73E-05 30784000 7289.3 6693.3 7364.2 6394.4 7222.2 6165.8 7059.4 6577.5 5695 5510.8 TRUE FALSE 6669.306757 6257.564953 6864.338622 6886.897796 6934.524481 6514.902268 6588.480307 6519.993611 6287.01563 6193.519508 1.076820174 1.010340719 1.108309841 1.111952225 1.119641986 1.051890167 1.06377001 1.05271221 1.015095798 1 12.59654375 -8.098734458 1.128996095 0.999357612 1.081127136 0.471532172 0.03004139 0.466903905 1.117231914 0.030319817 0.010411047 7.97E-09 8.098734458 0.081769524 HLPS(ph)PPLTQEVDLHSIAGPPVPPR ddPTM_A459_MK2206_30min_R2 6 HLPSPPLTQEVDLHSIAGPPVPPR 24 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 HLPS(0.772)PPLT(0.227)QEVDLHS(0.001)IAGPPVPPR;HLPS(0.987)PPLT(0.013)QEVDLHSIAGPPVPPR;HLPS(1)PPLTQEVDLHSIAGPPVPPR;HLPS(0.999)PPLT(0.001)QEVDLHSIAGPPVPPR;HLPS(0.997)PPLT(0.003)QEVDLHSIAGPPVPPR;HLPS(0.932)PPLT(0.068)QEVDLHSIAGPPVPPR 121.14 9.89E-08 68030100 92140.1 119554 115548 131480 135454 137388 128757 96999.9 121437.4 95912.7 TRUE FALSE 99194.4169 113617.1222 119400.3126 120737.6634 130135.3954 142616.3966 111851.0512 109678.12 131999.8055 92783.07645 1.069100322 1.224545753 1.286875982 1.301289718 1.402576853 1.537094932 1.205511344 1.182091866 1.422671144 1 16.50157406 -4.718735165 1.60174647 1.310462359 0.953509667 0.181774569 0.140202528 1.939806507 4.280821277 0.038871955 1.141269876 1.91E-05 4.718735165 -0.356952692 HLPS(ph)PPTLDSIITEYLR ddPTM_A459_MK2206_30min_R1 1 HLPSPPTLDSIITEYLR 17 0 Q9Y4B6-3;Q9Y4B6-2;Q9Y4B6 Q9Y4B6-3 VPRBP Protein VPRBP 1 HLPS(1)PPTLDSIITEYLR 161.14 1.49E-05 24844000 7867.2 8016 8128.5 7128.4 8090.8 7192.6 8694.1 7511.6 6932.1 7017.4 TRUE FALSE 7198.053328 7494.156943 7576.760067 7677.430603 7768.526303 7599.838796 8114.132452 7445.926873 7652.716602 7886.768491 0.912674606 0.950218959 0.960692592 0.973457077 0.985007524 0.963618852 1.028828532 0.944103644 0.970323474 1 12.94521858 -3.83481047 0.716029458 0.981322058 0.702097819 0.503373771 0.021213357 8.305255438 1.179344638 0.00827628 2.565098451 0.000146282 3.83481047 -0.279224239 HLPSPPTLDSIITEYLR ddPTM_A459_MK2206_30min_R1 2 HLPSPPTLDSIITEYLR 17 0 Q9Y4B6-3;Q9Y4B6-2;Q9Y4B6 Q9Y4B6-3 VPRBP Protein VPRBP 0 ; 215.48 3.99E-10 9092800 4156.7 3625.8 3847.6 3675.1 4066.4 3890.9 4245.5 3704.6 2971.7 3076.8 FALSE TRUE 3803.150837 3389.759761 3586.435632 3958.156839 3904.426677 4111.199396 3962.290441 3672.211073 3280.618849 3457.977213 1.09981952 0.98027244 1.037148429 1.144645148 1.129107116 1.188902975 1.14584053 1.06195352 0.948710372 1 11.75571265 -8.093987953 4.422937763 0.976974724 1.10240378 0.444064985 0.057037078 0.245566671 8.05569936 0.047470971 0.016956421 8.05E-09 8.093987953 0.125429056 HLQLAIR ddPTM_A459_MK2206_30min_R1 2 HLQLAIR 7 0 H0YFX9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;A0A3B3IS11;Q96QV6;Q9BTM1-2;Q71UI9-3;Q71UI9-4;Q71UI9;P0C0S5;C9J386;C9J0D1;A0A494C189;Q71UI9-2;P16104 H0YFX9;Q71UI9-3;P16104 H2AFJ;HIST1H2AJ;HIST1H2AH;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AA;H2AFV;H2AFZ;H2AFX Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2A.V;Histone H2A.Z;Histone H2AX 0 ; 143.37 0.0046134 64200000 6884.2 7410.9 5680 5529.3 5852.7 5473.2 5387.6 4860.9 5488.6 4679.1 FALSE TRUE 6298.66264 6928.449063 5294.457425 5955.167644 5619.574566 5783.087854 5028.203034 4818.401664 6059.159611 5258.782233 1.197741675 1.31750066 1.006783926 1.132423322 1.068607582 1.099700957 0.956153499 0.916258071 1.152198236 1 12.36051304 -5.165106577 0.637227681 1.012611514 1.348497685 0.440519399 0.086078008 2.036639161 0.868683711 0.04344275 0.465587078 6.84E-06 5.165106577 0.335886171 HLQQGSES(ph)PMMIGELR ddPTM_A459_MK2206_30min_R1 2 HLQQGSESPMMIGELR 16 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 HLQQGSES(1)PMMIGELR;HLQQGSES(1)PMMIGELR 156.29 5.61E-05 14736500 3388.9 2677.2 3178 2701.7 3898.4 3340 3796.5 3367.8 2536.1 2451.2 TRUE FALSE 3100.656259 2502.913793 2962.286214 2909.785402 3743.118473 3529.107914 3543.242412 3338.35568 2799.736671 2754.873162 1.125516885 0.908540483 1.075289511 1.056232077 1.358726247 1.281041887 1.286172613 1.211800139 1.016285145 1 11.42777018 -6.086219403 8.965237065 1.212067371 1.030559801 0.27146087 0.118732529 0.436650362 42.42654043 0.035039417 0.045329093 8.20E-07 6.086219403 -0.18150757 HLQQGSES(ph)PMMIGELR ddPTM_A459_MK2206_30min_R2 3 HLQQGSESPMMIGELR 16 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 HLQQGSES(1)PMMIGELR;HLQQGS(0.001)ES(0.999)PMMIGELR;HLQQGS(0.005)ES(0.995)PMMIGELR 123.42 0.00090466 10486300 56480 74939 60150 75295 74834 72903 81637 47993 58444 59658 TRUE FALSE 60804.15223 71217.63823 62155.37098 69143.15764 71895.64115 75677.37475 70917.96384 54265.84988 63527.35348 57711.36435 1.053590621 1.234031443 1.077004013 1.198085653 1.245779613 1.311308017 1.228838802 0.94029747 1.10077719 1 15.81656782 -7.753057897 24.99940936 1.01540299 1.19662014 0.504522444 0.081204743 148.0370033 441552.4731 0.040028785 0.022622885 1.77E-08 7.753057897 0.18121715 HLS(ph)ESSGKPLSTK ddPTM_A459_MK2206_30min_R1 2 HLSESSGKPLSTK 13 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 HLS(0.986)ES(0.014)S(0.001)GKPLSTK;HLS(0.993)ES(0.006)SGKPLSTK 141.65 0.0038809 29991000 7511.2 6767.7 7368.7 5650.2 5599.2 3329 3686.9 4336.8 3381.5 2799 TRUE FALSE 6872.332997 6327.1215 6868.533174 6085.379383 5376.172007 3517.485103 3440.953628 4298.883815 3733.019026 3145.761251 2.184632732 2.011316497 2.183424814 1.93446956 1.70902099 1.118166581 1.093838137 1.366563916 1.186682246 1 11.61919347 -6.507498288 2.052663571 1.165760823 2.098355052 0.935810705 0.114552652 0.076121065 0.643563474 0.042215935 0.046116764 3.11E-07 6.507498288 0.932594229 HLS(ph)ESSGKPLSTK ddPTM_A459_MK2206_30min_R2 1 HLSESSGKPLSTK 13 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 HLS(0.999)ES(0.001)SGKPLSTK 83.292 0.017226 106590000 172700 210440 200240 186770 163080 102000 113480 70164 72456 95239 TRUE FALSE 185922.0448 199989.8556 206915.9017 171510.2936 156676.6598 105881.6815 98579.93969 79334.67571 78758.09191 92131.35923 2.01801044 2.17070341 2.245879182 1.861584318 1.700579055 1.149246927 1.069993328 0.861103932 0.854845653 1 16.49140468 -6.633205579 1.225944892 0.900823865 2.148865304 0.969435842 0.092960328 0.068165211 0.21588517 0.043624257 0.044385199 2.33E-07 6.633205579 1.248041439 up HLS(ph)LPAGQVVPK ddPTM_A459_MK2206_30min_R2 2 HLSLPAGQVVPK 12 0 Q8IXS8 Q8IXS8 FAM126B Protein FAM126B 1 HLS(1)LPAGQVVPK;HLS(1)LPAGQVVPK 111.07 0.0045985 10549800 176258 169865 175654 179565 189875 134673 189465 129199 153624 151321 TRUE FALSE 189752.448 161429.7511 181510.2167 164893.9651 182419.5535 139798.0754 164588.0179 146085.7529 166985.9378 146383.4082 1.296270188 1.102787216 1.239964412 1.126452562 1.246176433 0.95501312 1.124362522 0.997966605 1.140743612 1 17.15939251 -6.751158926 24.99979209 1.048536662 1.194675374 0.527514846 0.07485604 169.575634 412369.8755 0.022790928 0.022544978 1.77E-07 6.751158926 0.146138712 HLS(ph)PYATLTVGDSSHK ddPTM_A459_MK2206_30min_R1 1 HLSPYATLTVGDSSHK 16 0 Q9BSJ8;Q9BSJ8-2 Q9BSJ8 ESYT1 Extended synaptotagmin-1 1 HLS(0.995)PY(0.003)AT(0.002)LTVGDSSHK 75.608 0.02024 11932000 2634.1 1971.4 2494.1 1788.2 2813.6 2185 2334.4 2509.7 1704.2 1862.1 TRUE FALSE 2410.055963 1843.061502 2324.807441 1925.927474 2701.528354 2308.712812 2178.676435 2487.757957 1881.357689 2092.791006 1.151598968 0.880671551 1.110864599 0.920267465 1.290873454 1.103174089 1.041038703 1.188727374 0.898970649 1 11.03121253 -4.4543437 22.90787509 1.058558221 4.608351368 0.052697162 0.12474498 1913.766761 668829.6357 0.028982678 15901.68034 3.51E-05 4.4543437 3.549793147 HLS(ph)QEDNDLNK ddPTM_A459_MK2206_30min_R2 2 HLSQEDNDLNK 11 0 F5H777;A0A2R8Y4L3;A0A2R8YE98;A0A2R8Y7C3;Q8N4S0-2;Q8N4S0 F5H777 CCDC82 Coiled-coil domain-containing protein 82 1 HLS(1)QEDNDLNK;HLS(1)QEDNDLNK 141.65 0.0034344 0 33391 31775 27543 33782 29277 22053.3 36612 26807 24374.8 28455 TRUE FALSE 35947.44063 30197.09971 28461.26987 31021.90254 28127.43787 22892.55378 31804.80042 30310.76694 26494.87604 27526.51568 1.305920482 1.0970186 1.033958319 1.126982539 1.021830667 0.831654614 1.15542413 1.101147973 0.962521968 1 14.74853438 HLSVNDLPVGR ddPTM_A459_MK2206_30min_R1 1 HLSVNDLPVGR 11 0 P30048-2;P30048 P30048-2 PRDX3 "Thioredoxin-dependent peroxide reductase, mitochondrial" 0 117.25 0.0076947 0 2145.5 1436.2 1401.2 1526.6 2175.2 2085.8 2170 1526.7 1494.7 1401.8 FALSE TRUE 1963.013959 1342.703119 1306.090448 1644.178997 2088.557178 2203.896193 2025.243259 1513.352223 1650.079414 1575.465567 1.245989757 0.852257991 0.82901872 1.043614682 1.325676182 1.398885662 1.285488748 0.96057461 1.047359871 1 10.62156251 -6.009587247 23.16913211 1.184917992 0.958890861 0.208501943 0.170240853 254.193987 614309.2464 0.052485628 0.073049386 9.78E-07 6.009587247 -0.22602713 HLT(ph)PEPDIVASTK ddPTM_A459_MK2206_30min_R1 2 HLTPEPDIVASTK 13 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 HLT(1)PEPDIVASTK;HLT(0.998)PEPDIVAS(0.002)TK 136.57 0.001474 17066600 12833.7 13951.8 13750.1 12425.4 12430.8 11484.1 12263.6 12227.6 12523 11302.3 TRUE FALSE 11742.12642 13043.53528 12816.78152 13382.40646 11935.65491 12134.31982 11445.51762 12120.69538 13824.81066 12702.51425 0.924393879 1.026846735 1.008995642 1.053524223 0.939629327 0.955269136 0.901043478 0.954196558 1.088352305 1 13.63282646 -8.248114565 24.59517883 1.044176158 0.972566848 0.265918535 0.048875673 806.0420717 1487814.988 0.035591586 0.013275232 5.65E-09 8.248114565 -0.07160931 HLT(ph)PEPDIVASTK ddPTM_A459_MK2206_30min_R2 4 HLTPEPDIVASTK 13 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 HLT(1)PEPDIVASTK;HLT(1)PEPDIVASTK;HLT(1)PEPDIVASTK;HLT(1)PEPDIVASTK 173.03 0.00021735 34905100 255758 323840 308135 319663 295634 236170 374965 281047 244467 201235 TRUE FALSE 275339.0291 307758.5765 318408.0671 293545.5103 284025.9237 245157.6148 325731.6451 317780.8079 265730.2978 194668.7184 1.414397913 1.580934929 1.63564064 1.507923372 1.459021901 1.259358036 1.673261363 1.632418451 1.365038512 1 17.57066155 -8.594246764 5.206244947 1.000040542 1.519473219 0.646451416 0.116732014 0.318071935 21.8723424 0.11804884 0.030674258 2.55E-09 8.594246764 0.519432677 HLTGEFEK ddPTM_A459_MK2206_30min_R2 4 HLTGEFEK 8 0 F5H018;B5MDF5;J3KQE5;P62826;H0YFC6 F5H018 RAN GTP-binding nuclear protein Ran 0 ;;; 176.44 0.00022214 36197500 307701 411192 355569 474088 440403 395252 468085 363325 369911 387974 FALSE TRUE 331258.8251 390772.8032 367423.493 435353.4939 423110.5654 410293.5918 406624.8772 410812.825 402085.1901 375314.4402 0.882616787 1.041187765 0.978975104 1.159970007 1.12734955 1.093199589 1.083424547 1.094583051 1.071328857 1 18.51774027 -4.221408953 1.012396689 1.090269228 0.481458473 0.580973196 0.049736618 3.445240884 1.293067736 0.015618818 2.990417955 6.01E-05 4.221408953 -0.608810755 HLTPVTLELGGK ddPTM_A459_MK2206_30min_R1 1 HLTPVTLELGGK 12 0 J3QS00;I3L1M4;J3QRD1;A0A5F9ZI12;A0A5F9ZHI5;A0A5F9ZGX4;A0A5F9ZHN9;P51648;P51648-2;E9PJV0;A0A5F9ZHZ9;P48448;P43353-2;P43353;P30838;A8MYB8;C9JMC5;I3L3I9;E9PNN6;C9JKT2 J3QS00;P30838 ALDH3A2;ALDH3B2;ALDH3B1;ALDH3A1 "Fatty aldehyde dehydrogenase;Aldehyde dehydrogenase family 3 member B2;Aldehyde dehydrogenase family 3 member B1;Aldehyde dehydrogenase, dimeric NADP-preferring" 0 111.52 0.011679 0 6095.6 4249.6 5265.3 3921 8854.9 7346.5 7185.3 6008.1 3486.2 3559.2 FALSE TRUE 5577.137211 3972.950268 4907.906106 4222.996099 8502.190582 7762.452481 6705.981747 5955.571815 3848.602965 4000.140567 1.394235307 0.993202664 1.22693341 1.055711925 2.125472953 1.940544926 1.676436524 1.488840633 0.962116931 1 11.96583498 -6.157209386 20.93534156 1.585117809 1.159297474 0.192855466 0.355604622 14.1840131 2837.948907 0.108509274 0.140085246 6.96E-07 6.157209386 -0.425820335 HLTVEELFGTS(ph)LPK ddPTM_A459_MK2206_30min_R1 1 HLTVEELFGTSLPK 14 0 Q9NPI6-2;Q9NPI6;A0A087WT55 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 HLTVEELFGT(0.064)S(0.936)LPK 98.408 0.0068892 3457200 1907 2088.7 1913.6 1846.6 1745.8 2627.7 3491.7 3428.1 3792.5 4215.8 TRUE FALSE 1744.799636 1952.72525 1783.710164 1988.825452 1676.261089 2776.478103 3258.775064 3398.128483 4186.743947 4738.085132 0.368249955 0.412133847 0.376462245 0.419753001 0.353784502 0.585991603 0.687783139 0.717194476 0.883636286 1 12.21008841 -7.644058087 0.7067019 0.990362948 0.367925743 0.960926418 0.04377251 0.124911572 0.120256842 0.041412175 0.0214743 2.27E-08 7.644058087 -0.622437205 down HLTYENVER ddPTM_A459_MK2206_30min_R1 2 HLTYENVER 9 0 H3BMH2;H3BSC1;P62491-2;Q15907-2;P62491;Q15907 H3BMH2 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B 0 ; 167.12 0.0011949 7080800 3811 2500.25 2611.5 2279.5 3849.2 4720.4 4753.5 3261.3 2581.9 2261.4 FALSE TRUE 3486.854438 2337.483271 2434.238656 2455.067485 3695.878213 4987.664969 4436.402688 3232.786798 2850.297744 2541.559305 1.371935107 0.919704398 0.957773699 0.965968994 1.454177444 1.962442883 1.745543643 1.271969846 1.121475993 1 11.31149818 -6.272714465 17.53575055 1.482341536 1.037401853 0.269753487 0.290672999 16.4058875 25514.90217 0.094630774 0.109220136 5.34E-07 6.272714465 -0.444939682 HLYISS(ph)SNPDLITR ddPTM_A459_MK2206_30min_R1 2 HLYISSSNPDLITR 14 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 HLYIS(0.001)S(0.749)S(0.25)NPDLITR;HLYIS(0.001)S(0.595)S(0.405)NPDLITR 137.17 0.00039837 11285000 3361.21 3388.53 3948.5 2985.09 4012.2 4203.82 4056.5 3450.74 3422.47 3108.24 TRUE FALSE 3075.321439 3167.936081 3680.486821 3215.002149 3852.385578 4441.836656 3785.898287 3420.570544 3778.248004 3493.312237 0.880345423 0.906857408 1.053580834 0.920330601 1.102788791 1.271525805 1.083756054 0.97917687 1.081566075 1 11.77037988 -5.448544026 1.064166811 1.08546941 0.865490047 0.387317974 0.086728314 0.844680438 1.528684156 0.033207696 0.164196094 3.56E-06 5.448544026 -0.219979363 HLYISS(ph)SNPDLITR ddPTM_A459_MK2206_30min_R2 1 HLYISSSNPDLITR 14 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 HLYIS(0.001)S(0.599)S(0.4)NPDLITR 144.15 0.000352 8173000 22764 26642 23643 25146 28765 27674 29111 24287 24055 23818 TRUE FALSE 24506.82934 25318.99702 24431.24582 23091.49136 27635.54157 28727.15346 25288.69073 27461.39429 26147.26042 23040.82061 1.063626585 1.098875663 1.060346167 1.002199173 1.19941655 1.246793851 1.097560333 1.191858344 1.134823315 1 14.49190448 -6.266943347 24.99713095 1.157378485 1.059597471 0.287014364 0.066828319 532.4236678 2418083.578 0.019902184 0.023255099 5.41E-07 6.266943347 -0.097781015 HLYISSS(ph)NPDLITR ddPTM_A459_MK2206_30min_R1 1 HLYISSSNPDLITR 14 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 HLYISS(0.055)S(0.945)NPDLITR 175.7 4.53E-05 15683000 3284.2 3304.5 3307.9 2743 3775.9 3879.6 3852.9 3490.2 3180.9 2595.2 TRUE FALSE 3004.861544 3089.376449 3083.368964 2954.266335 3625.497907 4099.259599 3595.880071 3459.685549 3511.565938 2916.712969 1.030221889 1.059197968 1.057138291 1.012875236 1.243008121 1.405438123 1.232853596 1.186159072 1.203946352 1 11.5101277 -6.264872673 24.81323852 1.231933336 1.042474025 0.436892651 0.094031896 235.1247409 1699301.165 0.028649605 0.033836599 5.43E-07 6.264872673 -0.18945931 HLYISSS(ph)NPDLITR ddPTM_A459_MK2206_30min_R2 3 HLYISSSNPDLITR 14 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 HLYISS(0.032)S(0.968)NPDLITR;HLYISS(0.006)S(0.994)NPDLITR;HLYISS(0.166)S(0.834)NPDLITR 164.8 0.00017054 21151700 51476 70706 55046 68381 67704 67257 76679 63156 64544 60932 TRUE FALSE 55417.04214 67194.84286 56881.20617 62794.05356 65045.60077 69816.51226 66610.95519 71410.70605 70157.92045 58943.79383 0.940167548 1.139981642 0.965007552 1.065320867 1.103519074 1.184459088 1.130075804 1.211505087 1.190251185 1 15.8470523 -6.335646232 2.304712757 1.15515795 1.027164359 0.348204591 0.074307384 0.317051999 3.303720616 0.02385361 0.028967284 4.62E-07 6.335646232 -0.127993591 HLYTLDGGDIINALCFSPNR ddPTM_A459_MK2206_30min_R1 1 HLYTLDGGDIINALCFSPNR 20 0 P63244;J3KPE3;H0Y8W2;H0YAM7;H0YAF8;D6REE5;D6RAC2;D6R9L0;D6R9Z1;H0Y8R5;D6RF23 P63244 GNB2L1 "Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed" 0 221.9 1.55E-19 13445000 3382.8 3260.8 3081.4 2983.9 3426.6 2793.8 3602.7 3401.4 2858.4 2653.2 FALSE TRUE 3095.075096 3048.521327 2872.243153 3213.720495 3290.111266 2951.982542 3362.370456 3371.661918 3155.540909 2981.898447 1.037954562 1.022342438 0.963226349 1.077743106 1.103361273 0.989967497 1.127593886 1.130709841 1.058232185 1 11.54201541 -5.789254791 24.88936225 1.075602357 1.009291248 0.252714433 0.047937209 253.4471542 226784.709 0.013544341 0.020094545 1.62E-06 5.789254791 -0.066311108 HMDPPPAPVQDRS(ph)PSPR ddPTM_A459_MK2206_30min_R1 5 HMDPPPAPVQDRSPSPR 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HMDPPPAPVQDRS(0.851)PS(0.149)PR;HMDPPPAPVQDRS(0.671)PS(0.329)PR;HMDPPPAPVQDRS(0.772)PS(0.228)PR;HMDPPPAPVQDRS(0.736)PS(0.264)PR;HMDPPPAPVQDRS(0.955)PS(0.045)PR 161.49 1.14E-05 63864500 19342.2 20532.1 19635.8 18173.9 22246.5 20110.5 20426.3 18699.5 16402.4 14552.6 TRUE FALSE 17697.04432 19195.45656 18302.9766 19573.65693 21360.3748 21249.13913 19063.6988 18536.01224 18107.48818 16355.48595 1.082024977 1.173640246 1.119072625 1.196764008 1.306006734 1.299205611 1.16558437 1.133320789 1.107120157 1 13.997487 -8.432674643 1.33203576 1.004549765 1.195798307 0.442991184 0.066376591 0.43816674 1.676769885 0.070449457 0.021603958 3.69E-09 8.432674643 0.191248542 HMDPPPAPVQDRS(ph)PSPR ddPTM_A459_MK2206_30min_R2 10 HMDPPPAPVQDRSPSPR 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HMDPPPAPVQDRS(0.625)PS(0.375)PR;HMDPPPAPVQDRS(0.949)PS(0.051)PR;HMDPPPAPVQDRS(0.885)PS(0.115)PR;HMDPPPAPVQDRS(0.782)PS(0.218)PR;HMDPPPAPVQDRS(0.615)PS(0.385)PR;HMDPPPAPVQDRS(0.727)PS(0.273)PR;HMDPPPAPVQDRS(0.765)PS(0.235)PR;HMDPPPAPVQDRS(0.821)PS(0.179)PR;HMDPPPAPVQDRS(0.5)PS(0.5)PR;HMDPPPAPVQDRS(0.625)PS(0.375)PR 115.74 0.0021094 110548800 278231.3 358635.9 291627.7 349354.9 361972.7 340179.2 359514.8 306025.8 318508.2 346807.9 TRUE FALSE 299532.9023 340826.5627 301350.422 320811.4871 347759.833 353124.9578 312310.0749 346024.4228 346211.4675 335491.5866 0.892817925 1.015901967 0.898235407 0.956243017 1.03656797 1.052559802 0.930902852 1.031395232 1.031952756 1 18.35591706 -6.137991189 5.434674352 1.013006409 0.941344628 0.399298773 0.044210775 0.251425901 10.12976545 0.012949224 0.016896225 7.28E-07 6.137991189 -0.07166178 HMLPSGFR ddPTM_A459_MK2206_30min_R1 1 HMLPSGFR 8 0 D3YTB1;F8W727;P62910 D3YTB1 RPL32 60S ribosomal protein L32 0 104.75 0.021263 0 2530 2228.5 2227 1896.7 2135.6 2985.7 2600.9 2157.3 2260 2642.9 FALSE TRUE 2314.810214 2083.424245 2075.837445 2042.784163 2050.53453 3154.747754 2427.398707 2138.438954 2494.935087 2970.322405 0.779312781 0.701413504 0.698859303 0.687731459 0.690340727 1.062089337 0.81721725 0.719934964 0.839954304 1 11.53640382 HNDLDDVGK ddPTM_A459_MK2206_30min_R2 2 HNDLDDVGK 9 0 P49588;P49588-2 P49588 AARS "Alanine--tRNA ligase, cytoplasmic" 0 ; 110.53 0.015169 9201900 251370 186068 202604 196502 159704 148493 232360 189928 132875 218470 FALSE TRUE 270615.0805 176828.1337 209358.7162 180447.158 153433.2185 154144.0052 201850.8529 214752.2417 144432.2273 211341.3418 1.280464476 0.836694478 0.990618847 0.85381855 0.725997182 0.729360398 0.955094025 1.016139293 0.683407355 1 17.68921548 HNGPNDASDGTVR ddPTM_A459_MK2206_30min_R1 2 HNGPNDASDGTVR 13 0 P31942;P31942-2 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 0 ; 157.5 0.0005127 6906500 2712.6 2714.7 2390.78 2508.73 3136.9 2812 3102.8 2816.7 1639.38 2192.88 FALSE TRUE 2481.879126 2537.972537 2228.500515 2701.952819 3011.950631 2971.21301 2895.817873 2792.073889 1809.799418 2464.55053 1.007031138 1.029791236 0.904221881 1.09632681 1.222109506 1.205580074 1.174988233 1.132893749 0.734332445 1 11.26710885 -5.848495906 9.953636663 1.10172983 0.985438953 0.088799743 0.136377396 0.72115771 76.20074032 0.039670282 0.058928177 1.42E-06 5.848495906 -0.116290877 HNGPNDASDGTVR ddPTM_A459_MK2206_30min_R2 1 HNGPNDASDGTVR 13 0 P31942;P31942-2 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 0 141.73 0.0011426 5259500 3493.4 4576.3 3926 6024.3 4990.3 4972 5905.1 4385 5625.3 3586.3 FALSE TRUE 3760.85739 4349.047597 4056.890881 5532.095419 4794.355748 5161.212944 5129.753277 4958.134556 6114.578426 3469.279325 1.084045716 1.253588192 1.169375683 1.594594987 1.38194573 1.487690226 1.478622157 1.429154038 1.762492395 1 11.76042029 -5.745766745 24.69600097 1.465871273 1.177461523 0.317656423 0.185797591 227.426834 358362.1133 0.046692589 0.080506529 1.80E-06 5.745766745 -0.28840975 HNGS(ph)SEILNK ddPTM_A459_MK2206_30min_R1 1 HNGSSEILNK 10 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2 Q8TDM6-4 DLG5 Disks large homolog 5 1 HNGS(0.897)S(0.103)EILNK 89.013 0.020797 7611900 8220.7 7363.7 7388.3 6394.7 8133.5 6963.1 7547 6766.8 6173.9 6431.5 TRUE FALSE 7521.486296 6884.321792 6886.802781 6887.220902 7809.525472 7357.344705 7043.5534 6707.638581 6815.698999 7228.282775 1.040563372 0.952414565 0.952757798 0.952815643 1.08041228 1.01785513 0.974443532 0.927971247 0.942920914 1 12.81943723 -7.523463848 21.75864597 0.951509073 0.996714812 0.164736081 0.042633202 7.349295735 273037.7608 0.021085525 0.012370419 3.00E-08 7.523463848 0.045205739 HNGS(ph)SEILNK ddPTM_A459_MK2206_30min_R2 4 HNGSSEILNK 10 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2 Q8TDM6-4 DLG5 Disks large homolog 5 1 HNGS(0.943)S(0.057)EILNK;HNGS(0.967)S(0.033)EILNK;HNGS(0.951)S(0.049)EILNK;HNGS(0.957)S(0.043)EILNK 104.81 0.012897 22306400 122202 136195 122224 141476 141506 106427 146002 100549 113160 94752 TRUE FALSE 131557.8791 129431.7543 126298.8872 129916.9582 135949.7634 110477.1541 126831.762 113691.0995 123002.4523 91660.25 1.435277332 1.41208162 1.377902495 1.417375124 1.483192152 1.205289687 1.383716082 1.240353365 1.341938869 1 16.4840086 -13.6232369 0.148362925 4.05E-12 1.49394179 0.745078473 0.068994561 47.73703962 0.540009323 14.50841061 0.362753274 2.38E-14 13.6232369 1.49394179 HNGSLS(ph)PGLEAR ddPTM_A459_MK2206_30min_R1 6 HNGSLSPGLEAR 12 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 HNGSLS(1)PGLEAR;HNGS(0.331)LS(0.669)PGLEAR;HNGS(0.419)LS(0.581)PGLEAR;HNGS(0.006)LS(0.994)PGLEAR;HNGS(0.006)LS(0.994)PGLEAR;HNGS(0.005)LS(0.995)PGLEAR 123.95 0.0026501 211412000 17123.9 13687 14235.7 10568.2 16000.7 14172.4 15830.2 13561.4 13527.3 11960.6 TRUE FALSE 15667.42238 12795.97381 13269.42035 11382.1646 15363.35824 14974.82904 14774.19624 13442.83411 14933.51124 13442.36943 1.165525354 0.951913566 0.987134033 0.84673797 1.142905521 1.114002195 1.09907679 1.000034569 1.110928496 1 13.71449984 -6.299484951 24.99900858 1.080697804 0.985212681 0.21180834 0.084882164 846.395809 556147.9453 0.026263895 0.029781019 5.02E-07 6.299484951 -0.095485123 HNGSLS(ph)PGLEAR ddPTM_A459_MK2206_30min_R2 5 HNGSLSPGLEAR 12 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 HNGS(0.004)LS(0.996)PGLEAR;HNGS(0.021)LS(0.979)PGLEAR;HNGS(0.004)LS(0.996)PGLEAR;HNGS(0.362)LS(0.638)PGLEAR;HNGS(0.004)LS(0.996)PGLEAR 154.13 0.00045044 270970400 153584 204516 188165 234914 213398 196119 217475 153465 166224 99284 TRUE FALSE 165342.5091 194360.0328 194438.3272 215720.7747 205018.9223 203582.446 188920.2713 173523.4024 180681.8631 96044.37121 1.721522116 2.023648345 2.024463534 2.246053278 2.134627149 2.119670767 1.96701034 1.806700385 1.881233234 1 16.55141345 -9.201852895 0.738631602 0.98205356 2.050443168 0.828581286 0.137857848 0.999560521 0.763611177 0.187162896 0.051980615 6.28E-10 9.201852895 1.068389608 HNGVGGS(ph)PPK ddPTM_A459_MK2206_30min_R2 2 HNGVGGSPPK 10 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 HNGVGGS(1)PPK;HNGVGGS(1)PPK 92.151 0.017879 28829000 371100 351760 364080 292190 328180 242030 386370 319270 252000 293850 TRUE FALSE 399511.7013 334292.1099 376218.2455 268317.1423 315294.0042 251240.6212 335639.1549 360999.6852 273918.5045 284261.6986 1.40543627 1.17600124 1.323492568 0.943908883 1.109168086 0.883835643 1.180739989 1.269955422 0.963613831 1 18.1168602 -5.747909115 24.99841509 1.062390193 1.289079219 0.472845032 0.12097808 229.3189326 423684.3546 0.033162626 0.057036916 1.79E-06 5.747909115 0.226689026 HNPT(ph)GAVLFMGQINKP ddPTM_A459_MK2206_30min_R2 1 HNPTGAVLFMGQINKP 16 1 P07093-2;P07093;P07093-3 P07093-2 SERPINE2 Glia-derived nexin 1 HNPT(1)GAVLFMGQINKP 88.78 0.040094 6596300 19439 42762 33707 28054 38063 30116 32587 23537 34310 28515 TRUE FALSE 20927.26479 40638.50126 34830.77456 25761.89846 36568.45537 31262.08548 28308.28776 26613.36671 37294.22178 27584.55789 0.758658699 1.473233736 1.262691057 0.933924646 1.325685752 1.133318345 1.026236776 0.964792215 1.351996357 1 14.75157324 -7.005981212 24.6754198 1.082387372 1.169571744 0.017032659 0.211208588 959.3069522 3957620.84 0.073749377 0.062946237 9.86E-08 7.005981212 0.087184372 HNS(ph)GSSSVDDGSATR ddPTM_A459_MK2206_30min_R1 1 HNSGSSSVDDGSATR 15 0 Q9NV58-3;Q9NV58 Q9NV58-3 RNF19A E3 ubiquitin-protein ligase RNF19A 1 HNS(0.934)GS(0.029)S(0.029)S(0.009)VDDGSATR 189.52 2.63E-05 1436000 159.08 198.96 271.75 272.2 307.87 302.93 386.85 225.22 154.49 183.68 TRUE FALSE 145.5494106 186.0076678 253.3043671 293.1648912 295.606886 320.0816348 361.0439423 223.2509253 170.5497883 206.4356651 0.705059422 0.901044244 1.227037813 1.420127142 1.431956468 1.550515191 1.748941696 1.081455209 0.826164356 1 7.689548431 -5.183518444 2.267718107 1.333493141 0.714095662 0.362524407 0.259231775 0.370810121 3.451885449 0.07633243 0.320029791 6.55E-06 5.183518444 -0.619397478 HNS(ph)GSSSVDDGSATR ddPTM_A459_MK2206_30min_R2 2 HNSGSSSVDDGSATR 15 0 Q9NV58-3;Q9NV58 Q9NV58-3 RNF19A E3 ubiquitin-protein ligase RNF19A 1 HNS(0.999)GS(0.001)SSVDDGSATR;HNS(0.551)GS(0.366)S(0.057)S(0.016)VDDGS(0.01)ATR 193.31 3.10E-05 8537900 5971.4 5989.7 6023.4 8703.7 7594.6 5512.47 9468 3879.28 7150.6 6147.8 TRUE FALSE 6428.574975 5692.260208 6224.21715 7992.579868 7296.397844 5722.250909 8224.840227 4386.315216 7772.546263 5947.197789 1.080941849 0.957133159 1.046579813 1.343923668 1.226863155 0.962175988 1.382977415 0.737543188 1.306925806 1 12.53799434 -10.61034035 14.63546749 1.000000008 1.111540838 0.0312505 0.192441207 0 0 0.177839485 0.043132411 2.45E-11 10.61034035 0.111540831 HNS(ph)MEDAR ddPTM_A459_MK2206_30min_R2 1 HNSMEDAR 8 0 Q96RY7-2;Q96RY7 Q96RY7-2 IFT140 Intraflagellar transport protein 140 homolog 1 HNS(1)MEDAR 74.611 0.039834 1363000 9480.5 8724.8 7411.9 6719 7569.4 6976.6 6635 9690.5 5736.6 4277.8 TRUE FALSE 10206.33437 8291.539119 7659.009047 6170.036207 7272.187323 7242.099402 5763.81653 10957.08162 6235.559099 4138.215736 2.466361113 2.003650763 1.850799846 1.490989499 1.757324361 1.750053613 1.392826497 2.647779217 1.506823108 1 12.01479314 -4.785553237 1.630325775 1.71742602 2.733358497 0.27392399 0.399360715 1.425076598 3.708157248 0.10792698 2.315272344 1.64E-05 4.785553237 1.015932476 HNS(ph)SDGFFNNGPLR ddPTM_A459_MK2206_30min_R1 2 HNSSDGFFNNGPLR 14 0 Q9HC44 Q9HC44 GPBP1L1 Vasculin-like protein 1 1 HNS(0.758)S(0.242)DGFFNNGPLR;HNS(0.774)S(0.226)DGFFNNGPLR 123.58 0.0010635 7701000 2591.5 2246.5 2333.5 1966.52 2274.4 2169.1 2424.6 2001.91 2157.47 2151.47 TRUE FALSE 2371.079316 2100.252442 2175.108522 2117.981711 2183.805832 2291.912568 2262.859358 1984.407512 2381.746727 2418.010346 0.980591055 0.868587037 0.899544754 0.875919209 0.903141641 0.947850604 0.935835267 0.820677842 0.985002703 1 11.2396047 -8.490971592 22.92912007 1.000000043 0.904156259 0.415109697 0.042200089 179.4926921 128986.9137 0.039335074 0.010156272 3.23E-09 8.490971592 -0.095843784 HNS(ph)SDGFFNNGPLR ddPTM_A459_MK2206_30min_R2 4 HNSSDGFFNNGPLR 14 0 Q9HC44 Q9HC44 GPBP1L1 Vasculin-like protein 1 1 HNS(0.5)S(0.5)DGFFNNGPLR;HNS(0.747)S(0.253)DGFFNNGPLR;HNS(0.838)S(0.162)DGFFNNGPLR;HNS(0.898)S(0.102)DGFFNNGPLR 95.264 0.0083479 13359100 41974.8 49793.9 39801.5 45656.5 45186.4 43351 49928 32776.2 35016.3 35346.8 TRUE FALSE 45188.42296 47321.20733 41128.46214 41926.2179 43412.15489 45000.75268 43372.39363 37060.16188 38061.95448 34193.43681 1.321552531 1.383926617 1.20281744 1.226148109 1.269604899 1.316064043 1.268442066 1.083838459 1.113136263 1 15.06143182 -7.760986664 4.465900295 1.069254488 1.284628788 0.774607323 0.054108027 0.100208976 4.845942589 0.031284714 0.015680067 1.73E-08 7.760986664 0.2153743 HNS(ph)TTSSTSSGGYR ddPTM_A459_MK2206_30min_R1 7 HNSTTSSTSSGGYR 14 0 A0A0A0MRT6;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 A0A0A0MRT6 ABI1 Abl interactor 1 1 HNS(0.926)T(0.053)T(0.006)S(0.002)S(0.006)T(0.006)S(0.002)S(0.001)GGYR;HNS(0.406)T(0.406)T(0.07)S(0.023)S(0.07)T(0.023)S(0.001)SGGYR;HNS(0.995)T(0.005)TSSTSSGGYR;HNS(0.988)T(0.01)T(0.001)SSTSSGGYR;HNS(0.47)T(0.47)T(0.035)S(0.01)S(0.01)T(0.006)SSGGYR;HNS(0.498)T(0.498)T(0.004)SSTSSGGYR;HNS(0.538)T(0.189)T(0.14)S(0.106)S(0.027)TSSGGYR 224.06 2.73E-09 22390970 2153.51 2254.36 2904.25 2202.19 1877.42 1652.63 1839.06 2190.9 975.47 2390.71 TRUE FALSE 1970.342666 2107.600754 2707.117602 2371.803055 1802.638386 1746.200482 1716.379663 2171.745192 1076.873597 2686.889204 0.733317423 0.78440181 1.007528557 0.882731991 0.670901645 0.649896721 0.638798079 0.808274933 0.400788241 1 11.39172112 -6.26442686 24.88374958 0.680147424 0.858276412 0.192101367 0.156019463 364.0652001 3032421.424 0.045654576 0.054059353 5.44E-07 6.26442686 0.178128988 HNS(ph)TTSSTSSGGYR ddPTM_A459_MK2206_30min_R2 4 HNSTTSSTSSGGYR 14 0 A0A0A0MRT6;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 A0A0A0MRT6 ABI1 Abl interactor 1 1 HNS(0.708)T(0.035)T(0.222)S(0.035)STSSGGYR;HNS(0.857)T(0.054)T(0.087)S(0.001)STSSGGYR;HNS(0.98)T(0.008)T(0.013)SSTSSGGYR;HNS(0.848)T(0.058)T(0.091)S(0.002)STSSGGYR 130.64 0.00063155 66152110 2448.07 5040.45 3593.25 4667.37 6645.3 5854.5 7625.87 4943.61 4504.1 4726.73 TRUE FALSE 2635.496121 4790.148583 3713.047162 4286.030941 6384.372132 6077.2971 6624.584109 5589.756801 4895.858476 4572.497187 0.576380042 1.047600116 0.812039245 0.937350154 1.396255016 1.329098051 1.448789105 1.222473535 1.070718751 1 12.15876657 -6.123580598 4.669185345 1.268878729 0.840971432 0.581449498 0.167650742 0.161178174 5.429315364 0.04962517 0.065327759 7.52E-07 6.123580598 -0.427907297 HNS(ph)TTSSTSSGGYRR ddPTM_A459_MK2206_30min_R1 1 HNSTTSSTSSGGYRR 15 1 A0A0A0MRT6;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 A0A0A0MRT6 ABI1 Abl interactor 1 1 HNS(0.794)T(0.176)T(0.014)S(0.014)S(0.001)TSSGGYRR 62.589 0.038738 977140 1245.4 1657.7 1646.6 1489 1017.2 995.7 1393.4 1438.3 1158.4 1388 TRUE FALSE 1139.47219 1549.783429 1534.83338 1603.683038 976.68277 1052.075674 1300.448828 1425.725095 1278.819825 1559.955919 0.730451532 0.993478989 0.983895353 1.028030997 0.62609639 0.67442654 0.8336446 0.913952168 0.819779463 1 10.60728955 -6.235495607 24.99149508 0.801285996 0.941781773 0.18346599 0.125259857 1230.558085 1185389.856 0.038195713 0.049294558 5.81E-07 6.235495607 0.140495777 HNS(ph)WDTVNTVLPEDPEVADLFSR ddPTM_A459_MK2206_30min_R1 2 HNSWDTVNTVLPEDPEVADLFSR 23 0 Q8N961 Q8N961 ABTB2 Ankyrin repeat and BTB/POZ domain-containing protein 2 1 HNS(0.63)WDT(0.37)VNTVLPEDPEVADLFSR;HNS(0.929)WDT(0.071)VNTVLPEDPEVADLFSR 167.74 2.09E-12 7142500 1174.26 1461.04 1607.39 999.33 1632.98 1386.49 1547.15 1470.68 1219.42 1240.05 TRUE FALSE 1074.383021 1365.92603 1498.284845 1076.29857 1567.934949 1464.991866 1443.942446 1457.822 1346.183073 1393.676756 0.770898285 0.980088119 1.075059076 0.772272742 1.125034871 1.051170481 1.036066965 1.046025912 0.965922024 1 10.44468027 -6.280387715 24.99893712 1.040296199 0.917864395 0.339672701 0.092673005 1061.597371 1400583.943 0.028605151 0.03248672 5.24E-07 6.280387715 -0.122431804 HNS(ph)WSSSSR ddPTM_A459_MK2206_30min_R1 3 HNSWSSSSR 9 0 H3BQ37;H3BPW9;Q96F86 H3BQ37 EDC3 Enhancer of mRNA-decapping protein 3 1 HNS(1)WSSSSR;HNS(1)WSSSSR;HNS(0.975)WS(0.024)S(0.001)SSR 191.33 0.0019681 32578100 3542.38 2564.69 2884.46 1781.15 3138.93 3429.3 4193.7 3579.3 652.42 2210.38 TRUE FALSE 3241.081979 2397.728215 2688.670892 1918.334482 3013.899771 3623.464002 3913.945925 3548.006557 720.2413937 2484.218562 1.30466861 0.965184083 1.08230046 0.772208416 1.213218441 1.45859308 1.575523984 1.428218359 0.289926742 1 11.27857639 -6.460735376 24.98612938 1.218464806 1.025374599 0.015646634 0.358890083 743.2226112 298828.4288 0.113499685 0.128696393 3.46E-07 6.460735376 -0.193090207 HNS(ph)WSSSSR ddPTM_A459_MK2206_30min_R2 4 HNSWSSSSR 9 0 H3BQ37;H3BPW9;Q96F86 H3BQ37 EDC3 Enhancer of mRNA-decapping protein 3 1 HNS(0.785)WS(0.212)S(0.002)S(0.002)SR;HNS(0.975)WS(0.025)SSSR;HNS(0.996)WS(0.004)SSSR;HNS(0.999)WS(0.001)SSSR 152.96 0.0010517 81282600 17781.1 40766.8 27476.2 64240 51373.6 127583 34103.1 32929.8 75478 26164.3 TRUE FALSE 19142.43469 38742.37999 28392.24279 58991.38651 49356.41433 132438.2605 29625.322 37233.83792 82042.94001 25310.56103 0.756302267 1.530680412 1.121754779 2.330702446 1.95003241 5.232529626 1.170472751 1.471079123 3.241450867 1 14.62745187 -5.783407633 5.61373437 2.423992404 1.169273917 0.181116674 1.166076492 0.291717277 27.11282837 0.330937848 0.521055949 1.65E-06 5.783407633 -1.254718487 HNSFDT(ph)VNTALVEDSEGLDCAGQHCSR ddPTM_A459_MK2206_30min_R1 1 HNSFDTVNTALVEDSEGLDCAGQHCSR 27 0 A6QL63-2;A6QL63-3;A6QL63 A6QL63-2 BTBD11 Ankyrin repeat and BTB/POZ domain-containing protein BTBD11 1 HNS(0.419)FDT(0.579)VNT(0.002)ALVEDSEGLDCAGQHCSR 89.979 2.50E-05 3054500 866.56 703.78 951.91 433.69 1011.5 930.7 940.21 896.26 495.46 476.76 TRUE FALSE 792.8545215 657.9637941 887.2970014 467.0928789 971.2098131 983.3954297 877.4903064 888.4240933 546.96484 535.8246282 1.479690331 1.227946159 1.655946656 0.871727155 1.812551649 1.835293449 1.637644595 1.658050128 1.02079078 1 9.065617083 -8.272601173 23.50067589 1.010395023 1.519255329 0.360495409 0.272727462 419.7779555 883803.4898 0.261462744 0.070398773 5.34E-09 8.272601173 0.508860305 HNSFDT(ph)VNTALVEDSEGLDCAGQHCSR ddPTM_A459_MK2206_30min_R2 2 HNSFDTVNTALVEDSEGLDCAGQHCSR 27 0 A6QL63-2;A6QL63-3;A6QL63 A6QL63-2 BTBD11 Ankyrin repeat and BTB/POZ domain-containing protein BTBD11 1 HNS(0.374)FDT(0.625)VNT(0.001)ALVEDSEGLDCAGQHCSR;HNS(0.393)FDT(0.607)VNTALVEDSEGLDCAGQHCSR 141.36 1.45E-12 8674000 12399.9 32120 19792.9 44729 42122 60293 44697 26162 36025 18360.2 TRUE FALSE 13349.24588 30524.96751 20452.78541 41074.49762 40468.07863 62587.49236 38828.23021 29581.46323 39158.38938 17761.10818 0.751599829 1.718640932 1.151548946 2.312608944 2.278465861 3.523850637 2.186137814 1.665519005 2.204726698 1 14.11643398 -5.763223723 24.99935157 2.256995933 1.25840086 0.317327599 0.63452322 53.96073693 756030.4551 0.178205898 0.280539879 1.72E-06 5.763223723 -0.998595073 HNSTT(ph)SSTSSGGYR ddPTM_A459_MK2206_30min_R2 1 HNSTTSSTSSGGYR 14 0 A0A0A0MRT6;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 A0A0A0MRT6 ABI1 Abl interactor 1 1 HNS(0.076)T(0.024)T(0.512)S(0.363)S(0.015)T(0.011)SSGGYR 133.9 0.00093396 53905000 2699.2 3915.2 3912.9 8201 5921.9 6671 5877.9 3678.8 4546.7 4452.3 TRUE FALSE 2905.852827 3720.776861 4043.354133 7530.952066 5689.376451 6924.86958 5106.124669 4159.631791 4942.163747 4307.021816 0.674677991 0.863886235 0.938781902 1.748528888 1.320953711 1.607809265 1.185534898 0.965779132 1.147466616 1 12.07247492 -5.539708036 24.82684963 1.29598491 0.802294972 0.4501857 0.235294137 194.9048344 287525.6932 0.067614687 0.117148567 2.89E-06 5.539708036 -0.493689939 HNT(ph)PSLLEAALTQEASTPDSQVWPTAPDITR ddPTM_A459_MK2206_30min_R2 1 HNTPSLLEAALTQEASTPDSQVWPTAPDITR 31 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 HNT(0.75)PS(0.25)LLEAALTQEASTPDSQVWPTAPDITR 132.7 5.36E-18 4496000 8104.1 8688.5 10827 10791 9544.7 8496.3 12391 7597.4 8410.1 8820.4 TRUE FALSE 8724.556127 8257.041724 11187.96678 9909.340781 9169.92712 8819.63265 10764.04682 8590.406266 9141.595296 8532.59107 1.022497862 0.967706252 1.31120391 1.161351892 1.074694315 1.033640611 1.261521468 1.006775808 1.071373891 1 13.05876819 HNTPS(ph)LLEAALTQEASTPDSQVWPTAPDITR ddPTM_A459_MK2206_30min_R1 1 HNTPSLLEAALTQEASTPDSQVWPTAPDITR 31 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 HNT(0.41)PS(0.59)LLEAALTQEASTPDSQVWPTAPDITR 115.72 5.78E-16 5507600 750.23 808.77 887.7 635.97 827.18 763.74 887.51 669.05 1041.6 887.4 TRUE FALSE 686.4189989 756.118926 827.4453973 684.9525196 794.231669 806.9822988 828.3058273 663.2005664 1149.878047 997.3378115 0.688251253 0.75813723 0.829654093 0.68678086 0.796351707 0.809136372 0.83051682 0.664970844 1.152947411 1 9.961938437 -8.263879806 24.9999394 1.076473732 0.763399152 0.782675122 0.067083633 93.77764609 960634.6914 0.053053255 0.016179885 5.45E-09 8.263879806 -0.31307458 HNTPS(ph)LLEAALTQEASTPDSQVWPTAPDITR ddPTM_A459_MK2206_30min_R2 1 HNTPSLLEAALTQEASTPDSQVWPTAPDITR 31 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 HNT(0.434)PS(0.566)LLEAALTQEASTPDSQVWPTAPDITR 96.46 3.21E-08 3599300 8462.4 8825.4 8673.6 7641.2 9414.6 5463.7 12472 7610.4 8044 6471.1 TRUE FALSE 9110.28785 8387.143469 8962.773495 7016.889517 9044.935499 5671.624932 10834.41142 8605.10541 8743.65258 6259.948537 1.455329512 1.339810291 1.431764725 1.120918084 1.444889754 0.906017821 1.730750877 1.374628778 1.396761096 1 12.61193508 HNYYESFSLS(ph)PAAVADNVER ddPTM_A459_MK2206_30min_R1 1 HNYYESFSLSPAAVADNVER 20 0 B2WTI3;B2WTI4;K7EJU9;Q6NYC1-2;Q6NYC1;Q6NYC1-3 B2WTI3 JMJD6 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 1 HNYYESFSLS(1)PAAVADNVER 140.93 4.19E-05 7349100 1577.9 1839.2 1531 1356.8 1741.6 1420.7 1716.8 1588.4 1123.1 1424.4 TRUE FALSE 1443.691319 1719.467746 1427.079986 1461.300971 1672.228384 1501.138806 1602.275404 1574.512786 1239.850264 1600.865426 0.901819288 1.074086377 0.891442818 0.912819371 1.044577737 0.937704558 1.00088076 0.983538504 0.774487502 1 10.64463632 HPAKPDPSGECNPDLR ddPTM_A459_MK2206_30min_R2 1 HPAKPDPSGECNPDLR 16 1 E9PC52;Q16576;Q16576-2;Q5JP01 E9PC52 RBBP7 Histone-binding protein RBBP7 0 100.4 0.0048063 2779700 7620.7 10739 7133.7 9710.7 8866 11351 9230.2 6986 8115.3 8468 FALSE TRUE 8204.146651 10205.71688 7371.533998 8917.304747 8517.876292 11782.97026 8018.263653 7899.094187 8821.154125 8191.689853 1.001520663 1.245862216 0.899879528 1.08857939 1.039819188 1.438405319 0.978829008 0.964281403 1.07684181 1 12.99994538 HPASLTSSGSSGS(ph)PSSSIK ddPTM_A459_MK2206_30min_R2 2 HPASLTSSGSSGSPSSSIK 19 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 HPASLTSS(0.001)GS(0.031)S(0.031)GS(0.895)PS(0.031)S(0.009)S(0.003)IK;HPASLT(0.013)S(0.001)S(0.038)GS(0.025)S(0.025)GS(0.894)PS(0.004)S(0.001)SIK 230.27 1.17E-23 6515200 14459.3 23930.6 16516.5 26509.2 22963.1 26535.4 26741.2 19955.8 18677.6 19996.7 TRUE FALSE 15566.31513 22742.2412 17067.15187 24343.31356 22061.45331 27545.22324 23230.04832 22564.09158 20302.14389 19344.20932 0.804701545 1.175661451 0.882287386 1.258428978 1.140468083 1.423951881 1.200878668 1.166451997 1.049520482 1 14.23961414 -4.008797404 0.810867001 1.182599901 6.70E-15 0.312936974 0.143113024 9.063171083 1.847984037 0.051279865 12.95752018 9.80E-05 4.008797404 -1.182599901 HPCS(ph)PSDHR ddPTM_A459_MK2206_30min_R2 1 HPCSPSDHR 9 0 Q8WXF0 Q8WXF0 SRSF12 Serine/arginine-rich splicing factor 12 1 HPCS(0.94)PS(0.06)DHR 71.153 0.047123 275300 0 482.25 0 566.75 577.23 768.39 444.69 0 0 0 TRUE FALSE 0 458.3021663 0 520.4447121 554.5650499 797.6316199 386.3016688 0 0 0 0 HPDVEVDGFSELR ddPTM_A459_MK2206_30min_R1 1 HPDVEVDGFSELR 13 0 P09874;Q5VX84;Q5VX85 P09874 PARP1 Poly [ADP-ribose] polymerase 1 0 111.31 0.01009 0 1123.4 1341.7 1226.6 923.52 1355.4 1201.9 1126.4 1030.5 945.87 855.6 FALSE TRUE 1027.848931 1254.355086 1143.34181 994.6496704 1301.411548 1269.950539 1051.259911 1021.490447 1044.196571 961.5981875 1.068896494 1.304448264 1.189001627 1.034371407 1.353383944 1.320666528 1.093242401 1.062284081 1.085896984 1 9.909290366 -7.450053309 7.474145578 1.059753892 1.213287394 0.366104549 0.098586038 0.32977512 30.04665068 0.042769717 0.028599913 3.55E-08 7.450053309 0.153533501 HPDVEVDGFSELR ddPTM_A459_MK2206_30min_R2 1 HPDVEVDGFSELR 13 0 P09874;Q5VX84;Q5VX85 P09874 PARP1 Poly [ADP-ribose] polymerase 1 0 125.84 0.0030491 0 2443.7 2522.5 5989.1 6670.3 6173.4 6131.1 4983.6 1741.6 4574.1 4711.8 FALSE TRUE 2630.791551 2397.236318 6188.773605 6125.315153 5931.001297 6364.423307 4329.247334 1969.2331 4971.94695 4558.054352 0.577174239 0.525934123 1.357766522 1.343844255 1.301213377 1.396302636 0.949801604 0.432033703 1.090804665 1 12.15420241 -7.523488184 24.99998118 0.795035038 1.099232011 0.091501129 0.334394637 47.6003867 1952330.662 0.169566985 0.09902446 3.00E-08 7.523488184 0.304196973 HPELADK ddPTM_A459_MK2206_30min_R2 4 HPELADK 7 0 P46783;A0A2R8Y6L3;F6U211;A0A2R8Y7H1;S4R435;A0A2R8YFH6;A0A1W2PQS6;Q9NQ39 P46783 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 0 ;;; 109.86 0.022005 26483200 219910 214104 211678 220583 220632 153409 220110 243825 213941 222731 FALSE TRUE 236746.4787 203471.9067 218735.2389 202560.6633 211968.8791 159247.087 191209.2926 275693.7647 232549.2015 215463.3057 1.098778643 0.944345981 1.01518557 0.940116753 0.983781802 0.73909145 0.887433208 1.279539288 1.079298402 1 17.71708267 -7.743536527 24.99902658 1.134564198 0.940335435 0.351179373 0.108668299 237.9611319 332282.9433 0.052292896 0.030112367 1.80E-08 7.743536527 -0.194228763 HPEPVPEEGS(ph)EDELPPQVHKV ddPTM_A459_MK2206_30min_R1 2 HPEPVPEEGSEDELPPQVHKV 21 1 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 HPEPVPEEGS(1)EDELPPQVHKV;HPEPVPEEGS(1)EDELPPQVHKV 121.39 3.76E-05 34192000 9353.2 9187.1 8471.8 8433.7 10775.7 9159.7 9584.3 9321 8453 7671.4 TRUE FALSE 8557.661224 8589.01812 7896.75782 9083.265035 10346.48105 9678.314298 8944.948835 9239.50748 9331.719599 8621.790948 0.992561902 0.996198838 0.9159069 1.053524156 1.200038497 1.122541054 1.037481527 1.071645965 1.082341204 1 13.07377187 -5.952039307 7.434748354 1.092088078 0.972440536 0.487373959 0.053605266 0.18734173 24.05473921 0.015644015 0.023225262 1.12E-06 5.952039307 -0.119647542 HPEPVPEEGS(ph)EDELPPQVHKV ddPTM_A459_MK2206_30min_R2 4 HPEPVPEEGSEDELPPQVHKV 21 1 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 HPEPVPEEGS(1)EDELPPQVHKV;HPEPVPEEGS(1)EDELPPQVHKV;HPEPVPEEGS(1)EDELPPQVHKV;HPEPVPEEGS(1)EDELPPQVHKV 76.796 0.0014074 55096300 97022 129512 127704 131919 132061 127558 131544 93753 133227 97061 TRUE FALSE 104450.0789 123080.6224 131961.5876 121140.7957 126875.6216 132412.3091 114272.1148 106006.839 144814.8436 93893.90752 1.112426585 1.310847803 1.405432909 1.290188032 1.351265752 1.410233236 1.217034393 1.129006576 1.542324177 1 16.51874393 -10.60154057 5.883390925 0.999998839 1.306479032 0.353695129 0.124749044 1.85E-06 2.90E-07 0.117543361 0.028508344 2.50E-11 10.60154057 0.306480193 HPGSFDVVHVK ddPTM_A459_MK2206_30min_R2 1 HPGSFDVVHVK 11 0 P62701;C9JEH7;P22090 P62701 RPS4X;RPS4Y1 "40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1" 0 123.96 0.0020937 4032000 35889 51298 44629 65213 62283 64690 64538 46164 54769 58594 FALSE TRUE 38636.68943 48750.61591 46116.90859 59884.88929 59837.45647 67151.82328 56064.08308 52197.7933 59532.70862 56682.08258 0.681638494 0.860071008 0.813606461 1.056504747 1.055667925 1.184709881 0.989097093 0.920887006 1.050291484 1 15.79060515 -5.726529896 5.509312807 1.038757755 0.78851303 0.70091233 0.075378599 0.109259257 8.449056019 0.022078166 0.037701546 1.88E-06 5.726529896 -0.250244725 HPHDIIDDINSGAVECPAS ddPTM_A459_MK2206_30min_R1 2 HPHDIIDDINSGAVECPAS 19 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 0 ; 166.35 9.31E-09 32878000 5741.5 6323.1 6743.3 4729.5 5919.3 5218.2 6442.1 5405.3 5589.1 5376.7 FALSE TRUE 5253.155275 5911.465041 6285.583584 5093.766909 5683.521747 5513.649975 6012.359263 5358.042032 6170.106946 6042.806188 0.869323806 0.978264875 1.040176267 0.842947258 0.940543445 0.91243204 0.994961459 0.886681099 1.021066497 1 12.56100296 -8.282887395 24.34016131 1.010533284 0.936843868 0.225646523 0.057003772 1036.988528 1176805.169 0.0534826 0.013872211 5.21E-09 8.282887395 -0.073689416 HPHDIIDDINSGAVECPAS ddPTM_A459_MK2206_30min_R2 2 HPHDIIDDINSGAVECPAS 19 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 0 ; 116.78 0.00065235 6362500 24820.8 33263 27044.5 35842 33677 28650.7 31472.7 25273.3 28988.7 27142.8 FALSE TRUE 26721.09953 31611.20779 27946.15013 32913.59395 32354.67177 29741.02247 27340.29668 28576.60709 31510.08473 26257.13266 1.017670127 1.203909361 1.064326044 1.253510594 1.232224104 1.132683559 1.041252182 1.088336928 1.2000581 1 14.68042176 -7.008095098 24.57342405 1.089372443 1.160078716 0.141989277 0.082377035 634.1308588 1924965.696 0.029723479 0.025062886 9.82E-08 7.008095098 0.070706274 HPLLSSGGPQS(ph)PLR ddPTM_A459_MK2206_30min_R2 5 HPLLSSGGPQSPLR 14 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 HPLLS(0.016)S(0.03)GGPQS(0.954)PLR;HPLLS(0.001)S(0.013)GGPQS(0.986)PLR;HPLLS(0.001)S(0.003)GGPQS(0.996)PLR;HPLLSS(0.002)GGPQS(0.998)PLR;HPLLSS(0.001)GGPQS(0.999)PLR 143.93 0.00053395 28868800 49871.2 104809.6 70290.1 83816.1 125333 83821.2 114776.5 64568.31 100240.8 68441.1 TRUE FALSE 53689.37742 99604.90767 72633.53685 76968.05652 120411.7967 87011.0745 99706.20768 73007.60981 108959.5636 66207.87251 0.810921351 1.504426949 1.097052874 1.162521217 1.818693036 1.314210398 1.505956979 1.102702852 1.645719149 1 16.01471515 -4.751850387 24.85692838 1.357968365 0.81092018 0.289810842 0.252964753 455.6922604 1181172.233 0.060244294 0.759000412 1.77E-05 4.751850387 -0.547048185 HPPDDDLS(ph)QDSPEQEASKSPR ddPTM_A459_MK2206_30min_R1 1 HPPDDDLSQDSPEQEASKSPR 21 1 Q9P0K8-2;Q9P0K8 Q9P0K8-2 FOXJ2 Forkhead box protein J2 1 HPPDDDLS(0.491)QDS(0.188)PEQEAS(0.244)KS(0.077)PR 70.699 0.0032834 4546600 859.09 608.58 755.65 745.22 817.03 822.57 780.79 578 745.17 904.97 TRUE FALSE 786.0198842 568.9613314 704.3585834 802.6169735 784.485965 869.1432025 728.7049237 572.9466069 822.6330881 1017.084516 0.772816685 0.559404182 0.692527093 0.789134984 0.771308532 0.854543737 0.716464475 0.563322515 0.808814878 1 9.990223851 HPPDDDLSQDSPEQEAS(ph)KSPR ddPTM_A459_MK2206_30min_R1 1 HPPDDDLSQDSPEQEASKSPR 21 1 Q9P0K8-2;Q9P0K8 Q9P0K8-2 FOXJ2 Forkhead box protein J2 1 HPPDDDLSQDSPEQEAS(0.756)KS(0.244)PR 82.709 0.00083071 6978400 645.82 513.01 485.18 637.33 674.91 571.03 770.34 730.46 735.09 410.31 TRUE FALSE 590.8896177 479.6129558 452.2473334 686.417267 648.0269056 603.3612251 718.9520242 724.0736652 811.505236 461.1423005 1.281360693 1.040054134 0.980711015 1.488515077 1.405264503 1.308405723 1.55906761 1.570174032 1.759771843 1 8.8490682 -5.769960311 24.99655624 1.463187891 1.094643157 0.374521719 0.20047996 172.3894222 505713.4199 0.055391579 0.083651045 1.70E-06 5.769960311 -0.368544734 HPPDDDLSQDSPEQEAS(ph)KSPR ddPTM_A459_MK2206_30min_R2 1 HPPDDDLSQDSPEQEASKSPR 21 1 Q9P0K8-2;Q9P0K8 Q9P0K8-2 FOXJ2 Forkhead box protein J2 1 HPPDDDLSQDSPEQEAS(0.74)KS(0.26)PR 113.51 4.74E-05 6355200 14472 18924 18987 18999 20367 15452 19139 15309 16164 14492 TRUE FALSE 15579.98745 17984.26168 19620.0171 17446.72093 19567.28924 16040.03669 16626.02631 17309.93886 17569.9155 14019.12723 1.111337902 1.282837468 1.399517729 1.244494086 1.395756592 1.144153729 1.185953023 1.234737269 1.253281693 1 13.77510892 -6.787173999 24.99184834 1.179691696 1.290482326 0.269174431 0.099636479 345.176873 335211.6089 0.034654316 0.030572542 1.63E-07 6.787173999 0.11079063 HPPFS(ph)PPEPPLSSPASQHK ddPTM_A459_MK2206_30min_R2 1 HPPFSPPEPPLSSPASQHK 19 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 HPPFS(1)PPEPPLSSPASQHK 61.963 0.017549 4308300 8408.7 25768 16797 35842 29937 34607 30162 17497 21391 10314 TRUE FALSE 9052.476537 24488.39859 17357.0036 32913.59395 28761.52296 35923.99364 26201.69317 19783.91798 23251.55051 9977.455025 0.907293144 2.454373237 1.739622334 3.298796523 2.882651226 3.60051672 2.62608983 1.982862155 2.330408953 1 13.28445616 -4.624517829 1.718817599 2.573660775 1.41E-26 0.263402015 0.728281869 1.960455756 4.209463952 0.199337341 9.439990093 2.37E-05 4.624517829 -2.573660775 HPPFSPPEPPLS(ph)SPASQHK ddPTM_A459_MK2206_30min_R1 1 HPPFSPPEPPLSSPASQHK 19 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 HPPFSPPEPPLS(0.5)S(0.5)PASQHK 156.15 2.18E-06 18585000 2620.6 1857.9 1998.1 1607.2 3084.4 2471.3 3142.4 2431.8 1754.2 1911.7 TRUE FALSE 2397.704209 1736.950372 1862.474539 1730.986822 2961.541817 2611.22287 2932.77623 2410.539029 1936.555367 2148.535829 1.115971247 0.808434446 0.866857566 0.805658812 1.378400014 1.215349931 1.365011554 1.121944999 0.901337246 1 11.06913812 -6.247406211 24.82325447 1.182421892 0.89043272 0.394291703 0.15940773 715.3992227 1265468.01 0.048111508 0.061787875 5.66E-07 6.247406211 -0.291989171 HPPFSPPEPPLS(ph)SPASQHK ddPTM_A459_MK2206_30min_R2 1 HPPFSPPEPPLSSPASQHK 19 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 HPPFSPPEPPLS(0.483)S(0.483)PAS(0.035)QHK 71.735 0.0072438 13110000 73938 79953 76281 105200 102750 66393 101950 72729 80638 95518 TRUE FALSE 79598.75013 75982.65028 78824.17047 96604.82348 98715.51872 68919.63214 88563.84254 82234.93002 87651.74748 92401.25548 0.86144663 0.822311882 0.853063847 1.045492542 1.068335254 0.74587333 0.958470121 0.889976328 0.948599097 1 16.49562483 -5.558052094 24.70259128 0.943517428 0.840831301 0.241834009 0.084921081 229.6144115 161259.3627 0.023860701 0.041328163 2.77E-06 5.558052094 -0.102686127 HPPFSPPEPPLSS(ph)PASQHK ddPTM_A459_MK2206_30min_R2 1 HPPFSPPEPPLSSPASQHK 19 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 HPPFSPPEPPLS(0.047)S(0.939)PAS(0.014)QHK 133.92 0.00011312 13757000 68856 72696 64265 95069 75380 61371 95763 63593 60226 79457 TRUE FALSE 74127.6683 69086.02235 66407.56302 87301.55859 72420.20245 63706.51641 83189.20307 71904.82345 65464.34862 76864.3246 0.964396275 0.89880478 0.863958194 1.135787754 0.942182252 0.828817748 1.082286269 0.935477204 0.851687034 1 16.23002653 -6.250483297 0.003090852 1.896217925 6.22E-08 0.005978547 0.094252477 441774.3829 387.8651759 117543.361 120408.155 5.62E-07 6.250483297 -1.896217863 HPPLYQAGLTPPLS(ph)PPK ddPTM_A459_MK2206_30min_R1 2 HPPLYQAGLTPPLSPPK 17 0 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 HPPLYQAGLTPPLS(1)PPK;HPPLYQAGLTPPLS(1)PPK 125.23 0.000835 68115000 14789.7 19620.3 17502.1 14980.3 11723 11446 13717.1 13681.6 17328.9 15384.4 TRUE FALSE 13531.75835 18343.0149 16314.10622 16134.0853 11256.04809 12094.06263 12802.05729 13561.98321 19130.30117 17290.33562 0.782619762 1.060882525 0.943539014 0.933127364 0.65100229 0.699469513 0.740416934 0.784367841 1.106415838 1 14.07767825 -6.047557119 24.70791277 0.806972733 0.941556274 0.088682362 0.143963042 650.5722138 337998.1923 0.042897606 0.05538224 8.96E-07 6.047557119 0.134583541 HPPLYQAGLTPPLS(ph)PPK ddPTM_A459_MK2206_30min_R2 3 HPPLYQAGLTPPLSPPK 17 0 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 HPPLYQAGLTPPLS(1)PPK;HPPLYQAGLTPPLS(1)PPK;HPPLYQAGLTPPLS(1)PPK 98.169 0.0035042 72516000 157329 151171 159847 151602 148992 109736 174323 130130 113621 170731 TRUE FALSE 169374.2292 143664.068 165176.2192 139215.6316 143141.8255 113912.0804 151434.1807 147138.4378 123503.5492 165160.0615 1.025515659 0.869847509 1.000097831 0.842913416 0.86668547 0.689707181 0.916893463 0.890883889 0.747780959 1 17.33350533 -5.776432119 24.18924489 0.842865093 0.955623036 0.25156363 0.089310452 211.5567629 341324.7528 0.024200936 0.03607451 1.67E-06 5.776432119 0.112757944 HPPVLT(ph)PPDQEVIR ddPTM_A459_MK2206_30min_R1 1 HPPVLTPPDQEVIR 14 0 P05771-2 P05771-2 PRKCB Protein kinase C beta type 1 HPPVLT(1)PPDQEVIR 99.915 0.012687 6589900 723.12 866.81 835.58 762.99 1171.2 1095.1 1055 822.91 820 803.94 TRUE FALSE 661.6148467 810.3805115 778.8631577 821.755622 1124.548624 1157.103616 984.622875 815.7153846 905.2419344 903.5381566 0.732248928 0.896896833 0.862014683 0.909486352 1.244605572 1.280636138 1.089741333 0.902801258 1.001885673 1 9.819441718 -6.066507624 6.236247337 1.091547248 0.844171634 0.520885209 0.112681444 0.210494207 15.58042608 0.037661433 0.049364731 8.58E-07 6.066507624 -0.247375614 HPPVLT(ph)PPDQEVIR ddPTM_A459_MK2206_30min_R2 1 HPPVLTPPDQEVIR 14 0 P05771-2 P05771-2 PRKCB Protein kinase C beta type 1 HPPVLT(1)PPDQEVIR 99.371 0.013204 6920500 7874.6 9972.2 6662.8 10669 7880.2 9029.2 9109.3 6523.3 7784.3 6601 TRUE FALSE 8477.485431 9476.995049 6884.934427 9797.308572 7570.783753 9372.812533 7913.237968 7375.917708 8461.364343 6385.609911 1.327592125 1.484117442 1.078195274 1.534279217 1.185600727 1.46780224 1.23922978 1.155084293 1.325067529 1 12.64060871 -13.57449863 0.167121169 0.131866739 1.395281993 0.329331446 0.139746719 103.8390576 1.294356956 30.56541944 0.51393689 2.66E-14 13.57449863 1.263415254 HPQGEQMYR ddPTM_A459_MK2206_30min_R1 2 HPQGEQMYR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 189.38 0.0028391 5908900 340.03 333.67 0 0 323.38 145.45 289.94 0 0 0 FALSE TRUE 311.1086629 311.9480224 0 0 310.4990898 153.6852533 270.5986316 0 0 0 0 HPQGEQMYR ddPTM_A459_MK2206_30min_R2 2 HPQGEQMYR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 148.94 0.0020776 9079200 421.22 0 0 0 454.22 1258.6 0 0 520.66 0 FALSE TRUE 453.4689271 0 0 0 436.3850405 1306.496905 0 0 565.9460657 0 0 HPRPT(ph)ETASDSEGNFETPEAETPIR ddPTM_A459_MK2206_30min_R2 1 HPRPTETASDSEGNFETPEAETPIR 25 1 E5RFM9 E5RFM9 TACC1 1 HPRPT(0.637)ET(0.129)AS(0.129)DS(0.102)EGNFET(0.002)PEAETPIR 66.467 0.0011343 9160400 9520.7 12333 12447 12861 14961 15328 13184 13314 11071 8162.6 TRUE FALSE 10249.61211 11720.56115 12861.97677 11810.21516 14373.55597 15911.31778 11452.92496 15054.18551 12033.93557 7896.25503 1.298034584 1.484318973 1.628870486 1.495672963 1.820300372 2.015046084 1.450424906 1.906496872 1.524005433 1 12.94695287 -4.748481499 1.189953453 1.660209456 1.10854551 0.086586421 0.271158139 3.18263467 3.624068584 0.078674702 2.232296625 1.78E-05 4.748481499 -0.551663946 HPRPTETAS(ph)DSEGNFETPEAETPIR ddPTM_A459_MK2206_30min_R1 3 HPRPTETASDSEGNFETPEAETPIR 25 1 E5RFM9 E5RFM9 TACC1 1 HPRPT(0.038)ET(0.038)AS(0.913)DS(0.012)EGNFETPEAETPIR;HPRPT(0.047)ET(0.047)AS(0.898)DS(0.009)EGNFETPEAETPIR;HPRPT(0.134)ET(0.134)AS(0.66)DS(0.073)EGNFETPEAETPIR 118.08 4.27E-08 42237600 2496.7 2527.4 2389.61 2148.71 2779.02 2253.52 3192.33 2411.69 2358.54 2284.45 TRUE FALSE 2284.342554 2362.865801 2227.409931 2314.204017 2668.325749 2381.112355 2979.37549 2390.604849 2603.718673 2567.464913 0.889726883 0.920310844 0.867552238 0.901357602 1.039284212 0.927417681 1.160434745 0.931114905 1.01412045 1 11.32612885 -6.249457125 21.79983673 1.011804161 0.894621768 0.464505564 0.061712853 122.048054 222045.1856 0.017573976 0.022440378 5.63E-07 6.249457125 -0.117182392 HPRPTETAS(ph)DSEGNFETPEAETPIR ddPTM_A459_MK2206_30min_R2 1 HPRPTETASDSEGNFETPEAETPIR 25 1 E5RFM9 E5RFM9 TACC1 1 HPRPT(0.157)ET(0.045)AS(0.58)DS(0.218)EGNFETPEAETPIR 62.005 0.0021264 13230000 18588 19474 17898 25806 18466 20473 24416 17581 14655 15530 TRUE FALSE 20011.11157 18506.94948 18494.71039 23697.56725 17740.93206 21252.11436 21210.14987 19878.89706 15929.66541 15023.25737 1.332008836 1.231886602 1.231071926 1.577392084 1.180897832 1.414614277 1.411820975 1.323208181 1.060333656 1 13.87491003 -8.298538432 3.76433902 1.007277764 1.340050733 0.568576733 0.107839891 0.162670603 4.689278056 0.097896388 0.027276524 5.03E-09 8.298538432 0.332772969 HPRPTETASDS(ph)EGNFETPEAETPIR ddPTM_A459_MK2206_30min_R2 1 HPRPTETASDSEGNFETPEAETPIR 25 1 E5RFM9 E5RFM9 TACC1 1 HPRPT(0.276)ET(0.075)AS(0.276)DS(0.374)EGNFETPEAETPIR 54.626 0.0059866 9132900 14180 19060 22577 18803 18308 21513 25277 15445 15531 11667 TRUE FALSE 15265.6317 18113.50812 23329.70591 17266.73475 17589.13593 22331.69229 21958.09954 17463.71453 16881.85831 11286.30675 1.352579905 1.604910138 2.067080617 1.529883525 1.558449219 1.978653672 1.945552255 1.547336514 1.495782339 1 13.46228585 -8.652715045 1.628019778 1.004132103 1.71980687 0.490360545 0.216748211 0.486344947 2.664928102 0.215163406 0.061892609 2.22E-09 8.652715045 0.715674767 HPS(ph)SPSALR ddPTM_A459_MK2206_30min_R1 5 HPSSPSALR 9 0 O60504-2;O60504;H0YAZ3;H0YB51 O60504-2 SORBS3 Vinexin 1 HPS(0.951)S(0.048)PSALR;HPS(0.5)S(0.5)PSALR;HPS(0.487)S(0.487)PS(0.026)ALR;HPS(0.499)S(0.499)PS(0.001)ALR;HPS(0.496)S(0.496)PS(0.008)ALR 120.45 0.0065748 92836900 7707.15 4945.21 5612.24 4506.67 9991.33 8966.68 9937.5 7227.85 4369.64 4624.35 TRUE FALSE 7051.616421 4623.27593 5231.296785 4853.774504 9593.354169 9474.365673 9274.587507 7164.657669 4823.879715 5197.24939 1.356797777 0.889562071 1.006551041 0.933912179 1.84585219 1.822957677 1.784518466 1.378547984 0.928160139 1 12.34353257 -6.242930388 24.93826912 1.513306688 1.032612992 0.273795376 0.322497559 988.8436457 1332327.922 0.099398963 0.128084112 5.72E-07 6.242930388 -0.480693696 HPS(ph)SPSALR ddPTM_A459_MK2206_30min_R2 4 HPSSPSALR 9 0 O60504-2;O60504;H0YAZ3;H0YB51 O60504-2 SORBS3 Vinexin 1 HPS(0.973)S(0.027)PS(0.001)ALR;HPS(0.5)S(0.5)PSALR;HPS(0.746)S(0.254)PSALR;HPS(0.852)S(0.142)PS(0.006)ALR 117.71 0.0067728 125402800 18963.2 30469.7 22008.5 47074.7 36483 46238.9 36797.5 34140.7 36078.5 25838.5 TRUE FALSE 20415.03717 28956.61901 22742.25241 43228.54643 35050.49411 47998.55374 31965.94405 38603.00671 39216.54272 24995.39186 0.816752035 1.158478297 0.909857806 1.729460641 1.40227824 1.920296109 1.278873491 1.544404942 1.568950906 1 14.60937452 -5.752333915 24.99993988 1.51994358 0.981374126 0.487877257 0.247600901 152.1556701 417753.9913 0.062905649 0.106998055 1.77E-06 5.752333915 -0.538569454 HPSGGSS(ph)PPPR ddPTM_A459_MK2206_30min_R2 3 HPSGGSSPPPR 11 0 E9PKC0;Q6IQ23;Q6IQ23-2;H0YDE2;A0A1B0GTN9;Q6IQ23-3 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 HPSGGS(0.237)S(0.763)PPPR;HPSGGS(0.23)S(0.77)PPPR;HPSGGS(0.231)S(0.769)PPPR 125.84 0.002165 4613590 732 1954.1 1068.3 5223.89 4035.1 9568.4 4061.07 4920.66 7334.4 1371 TRUE FALSE 788.0424828 1857.062236 1103.916589 4797.081477 3876.661699 9932.532167 3527.846631 5563.807157 7972.332854 1326.264382 0.594182045 1.400220243 0.832350324 3.616987337 2.922993146 7.489104208 2.659987464 4.195096567 6.01111887 1 10.37315268 -5.885719844 2.072882209 4.31864472 0.887425382 0.391941176 1.710961424 0.302918143 2.649554383 0.512254235 0.889276538 1.30E-06 5.885719844 -3.431219338 HPTGNSITKS(ph)PPLMAK ddPTM_A459_MK2206_30min_R2 1 HPTGNSITKSPPLMAK 16 1 Q5VZ89-3;Q5VZ89;Q5VZ89-7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 HPTGNSIT(0.019)KS(0.981)PPLMAK 58.864 0.033722 22251000 31349 117650 75849 158630 176240 156750 161810 100530 162460 84798 TRUE FALSE 33749.10354 111807.6721 78377.7678 145669.4216 169319.9321 162715.2311 140564.1526 113669.6162 176590.4771 82031.0482 0.411418655 1.362992117 0.955464663 1.775783984 2.064095678 1.98358103 1.713548171 1.385690158 2.152727303 1 16.32388244 -4.853385722 0.963882832 1.753087336 2.13E-10 0.496979379 0.379250334 1.50903105 1.203327973 0.12680079 2.702910189 1.40E-05 4.853385722 -1.753087336 HPTPGSSDPLIQPSSPAVCPEPPSS(ph)PK ddPTM_A459_MK2206_30min_R2 3 HPTPGSSDPLIQPSSPAVCPEPPSSPK 27 0 A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636;P10636-9 A0A0G2JQJ7 MAPT Microtubule-associated protein tau 1 HPTPGSSDPLIQPSSPAVCPEPPS(0.286)S(0.714)PK;HPTPGSSDPLIQPSSPAVCPEPPS(0.132)S(0.868)PK;HPTPGSSDPLIQPSSPAVCPEPPS(0.177)S(0.823)PK 143.48 5.66E-13 25915400 59144.9 86997 59445 76588.1 85023.9 71405 82047.9 61598.9 57954.4 72194 TRUE FALSE 63673.07902 82676.85549 61426.86663 70330.60724 81685.43448 74122.36731 71274.91217 69650.08773 62995.16895 69838.31569 0.911721286 1.183832323 0.879558249 1.007049018 1.169636376 1.061342425 1.02057032 0.997304804 0.902014436 1 16.09173115 -7.915756492 2.962042515 0.950386307 1.039036747 0.107529191 0.093016271 0.553250194 9.505951274 0.06267532 0.025029649 1.21E-08 7.915756492 0.08865044 HPTT(ph)PSSTAK ddPTM_A459_MK2206_30min_R1 1 HPTTPSSTAK 10 0 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 HPT(0.006)T(0.965)PS(0.021)S(0.006)T(0.001)AK 106.16 0.028232 1486300 1990 1312.7 1109.9 1030.8 1589.2 1625.6 1983 2340.5 234 836.04 TRUE FALSE 1820.74005 1227.242991 1034.56308 1110.192395 1525.898799 1717.640067 1850.717688 2320.037255 258.3251374 939.614947 1.937751263 1.306112675 1.101050046 1.181539734 1.623961819 1.828025483 1.969655436 2.469136174 0.274926594 1 9.875925853 -6.3447376 8.853840887 1.63897348 1.356453655 0 0.594944268 1.372952796 136.4019235 0.18206861 0.206467642 4.52E-07 6.3447376 -0.282519825 HQAFEAELHANADR ddPTM_A459_MK2206_30min_R1 1 HQAFEAELHANADR 14 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 110.55 0.0023773 7380500 592.07 561.62 707.69 441.24 649.13 670.53 692.99 391.56 541.78 387.95 FALSE TRUE 541.7113374 525.0584359 659.6539745 475.2243813 623.2737775 708.4948291 646.7619015 388.1366322 598.0999698 436.0121749 1.242422502 1.204228841 1.512925585 1.089933742 1.429487096 1.624942765 1.483357435 0.890196776 1.371750617 1 8.76822461 -10.34018215 7.205201776 0.999999999 1.317141421 0.173881314 0.207012515 3.27E-09 4.26E-10 0.206079489 0.049981618 4.57E-11 10.34018215 0.317141422 HQAFEAELHANADR ddPTM_A459_MK2206_30min_R2 2 HQAFEAELHANADR 14 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 ; 145.52 0.00029071 13739100 21152.4 21358.9 19352.5 22906.1 20527.9 22718 30398 21748.3 19919 19740.1 FALSE TRUE 22771.84401 20298.24808 19997.70269 21034.59836 19721.8715 23582.54941 26406.70609 24590.87748 21651.51861 19095.98215 1.192493993 1.062959104 1.047220433 1.101519586 1.032775971 1.234948233 1.382840949 1.287751386 1.133825872 1 14.2209815 -6.774653224 24.21239732 1.2367933 1.084589251 0.230450621 0.103480623 184.2059216 337527.0607 0.035714678 0.031697587 1.68E-07 6.774653224 -0.152204048 HQDDLQDVIGR ddPTM_A459_MK2206_30min_R2 1 HQDDLQDVIGR 11 0 E5RID7;H0YBX2;G5EA19;U3KQS5;E5RG17;Q6P1N9 E5RID7 TATDN1 Putative deoxyribonuclease TATDN1 0 113.24 0.010132 2538600 13056 15990 12151 15435 14284 19091 15770 14127 11684 14387 FALSE TRUE 14055.5774 15195.95985 12556.10828 14173.91113 13723.13839 19817.52138 13699.38006 15973.44741 12700.2532 13917.55337 1.009917263 1.091855691 0.902177843 1.018419743 0.986030951 1.423922787 0.984323875 1.147719501 0.912534902 1 13.76461799 HQEGEIFDTEK ddPTM_A459_MK2206_30min_R1 2 HQEGEIFDTEK 11 0 Q02878 Q02878 RPL6 60S ribosomal protein L6 0 ; 190.53 1.94E-12 7629200 3064.8 3805.3 3050.4 2741.4 3070.7 3094.9 3488.8 2833.4 3947.6 3748.7 FALSE TRUE 2804.122666 3557.574278 2843.347347 2952.543103 2948.387517 3270.130563 3256.068518 2808.627883 4357.967147 4213.117257 0.665569576 0.844404288 0.674879709 0.700797752 0.699811407 0.776178389 0.772840707 0.666638907 1.034380693 1 12.04067235 -8.266948675 24.965924 1.0171904 0.729075813 0.816949366 0.055272403 183.1489153 829943.5 0.046688217 0.013421609 5.41E-09 8.266948675 -0.288114587 HQEVQDQDPVFQGSDS(ph)SGYQSDHKK ddPTM_A459_MK2206_30min_R2 1 HQEVQDQDPVFQGSDSSGYQSDHKK 25 1 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 HQEVQDQDPVFQGS(0.021)DS(0.258)S(0.258)GY(0.204)QS(0.258)DHKK 99.414 3.09E-06 17208000 49702 74888 60815 75611 76369 65519 88374 58280 49119 43679 TRUE FALSE 53507.22333 71169.17082 62842.54175 69433.33943 73370.36934 68012.37146 76770.38764 65897.39611 53391.28183 42253.75781 1.266330526 1.684327608 1.487265157 1.643246495 1.736422348 1.609617108 1.816888997 1.559562972 1.263586592 1 15.36679203 -8.437650524 2.49205754 1.006780638 1.615567936 0.657023046 0.141838745 0.154574166 2.012691205 0.133843221 0.036644807 3.65E-09 8.437650524 0.608787298 HQEVQDQDPVFQGSDSSGYQS(ph)DHK ddPTM_A459_MK2206_30min_R2 1 HQEVQDQDPVFQGSDSSGYQSDHK 24 0 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 HQEVQDQDPVFQGSDSSGYQS(1)DHK 148.69 9.48E-10 4584300 15018 9837.5 12596 12373 12294 7168.3 14694 10913 7605.5 10498 TRUE FALSE 16167.78963 9348.984055 13015.94435 11362.08632 11811.27579 7441.09468 12764.66015 12339.36657 8267.012642 10155.45112 1.592030668 0.920587766 1.28167072 1.118816504 1.163047869 0.732719265 1.256926945 1.215048591 0.814046815 1 13.30996671 -4.751100413 24.99654893 1.071150731 1.592031746 0.446102729 0.178500751 415.8772677 1005400.552 0.043229959 0.591794159 1.77E-05 4.751100413 0.520881015 HQGVMVGMGQK ddPTM_A459_MK2206_30min_R1 2 HQGVMVGMGQK 11 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2;ACTBL2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2" 0 ; 138.25 0.0017792 177894000 26739 26296 25940 25207 26692 24641 26882 24722 22495 21764 FALSE TRUE 24464.70764 24584.12562 24179.26507 27148.44751 25628.80112 26036.15213 25088.75083 24505.85816 24833.43575 24460.28863 1.000180661 1.005062777 0.988511029 1.109898903 1.047771819 1.064425384 1.025693164 1.001863001 1.015255221 1 14.57815381 HQGVMVGMGQK ddPTM_A459_MK2206_30min_R2 2 HQGVMVGMGQK 11 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2;ACTBL2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2" 0 ; 153.12 0.00079557 222284000 833260 961990 970320 1011830 993160 837190 1093430 840960 894150 913500 FALSE TRUE 897055.0263 914218.9755 1002669.985 929160.2523 954163.5482 869049.8521 949861.3276 950876.3594 971921.5507 883692.5698 1.01512116 1.034544147 1.134636658 1.051451924 1.079746035 0.983430077 1.074877576 1.076026202 1.099841261 1 19.75318503 -10.70205797 3.984915667 0.999967156 1.061286404 0.168081327 0.040760495 29571606.56 0.435794588 8911.91727 0.009986269 1.99E-11 10.70205797 0.061319248 HQLGPSLRS(ph)PPR ddPTM_A459_MK2206_30min_R2 1 HQLGPSLRSPPR 12 1 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;A0A0C4DGG3 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 HQLGPSLRS(1)PPR 72.523 0.031335 11424000 26103 32926 24880 34640 37977 35416 30242 22629 32338 26896 TRUE FALSE 28101.46575 31290.94272 25709.48678 31809.80119 36485.83216 36763.7807 26271.18907 25586.688 35150.70079 26018.38572 1.080061847 1.202647353 0.988127667 1.222589346 1.402309603 1.412992377 1.009716335 0.983407974 1.350994684 1 14.66724383 -10.98937039 2.931056082 0.99504146 1.181774477 0.1083132 0.157997561 19985462.02 23532985.18 812173.2037 0.046542469 1.02E-11 10.98937039 0.186733017 HQLLEADISAHEDR ddPTM_A459_MK2206_30min_R1 1 HQLLEADISAHEDR 14 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 126.56 0.00072618 3957600 2032.8 1134.5 1607.4 1260.8 1735.4 1787.3 2002 1303.1 1107 1236.2 FALSE TRUE 1859.899685 1060.643844 1498.294166 1357.907034 1666.275343 1888.495381 1868.450233 1291.707134 1222.076611 1389.349789 1.338683534 0.763410231 1.07841393 0.977368727 1.199320255 1.359265605 1.344837886 0.929720611 0.879603266 1 10.44019415 -7.915655274 24.91356532 0.928086325 1.137010608 0.233743903 0.176963965 38.12858167 11256.48936 0.103344326 0.049645001 1.21E-08 7.915655274 0.208924283 HQNS(ph)LPELEAAEAGAPGSGPVDLFR ddPTM_A459_MK2206_30min_R1 1 HQNSLPELEAAEAGAPGSGPVDLFR 25 0 Q96BZ8 Q96BZ8 LENG1 Leukocyte receptor cluster member 1 1 HQNS(1)LPELEAAEAGAPGSGPVDLFR 128.22 4.40E-08 4225600 907.61 767.09 1171.7 748.85 825.24 695.66 757.84 1068.9 593.01 649.38 TRUE FALSE 830.4130035 717.1523016 1092.168269 806.5265568 792.3689433 735.047668 707.2858764 1059.55472 654.6555116 729.830097 1.137816879 0.982629114 1.49646921 1.105088102 1.085689596 1.007149021 0.969110317 1.451782715 0.896997143 1 9.511416836 -5.97323232 24.99776032 1.084136426 1.202910916 0.097463735 0.183128944 598.9268 559320.7881 0.051061231 0.075734179 1.06E-06 5.97323232 0.11877449 HQNVQLPR ddPTM_A459_MK2206_30min_R1 1 HQNVQLPR 8 0 A0A0U1RRM4;A0A087WUW5;A0A0D9SF20;K7EK45;A6NLN1;P26599;P26599-2;P26599-3 A0A0U1RRM4;A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 0 96.492 0.029554 3504100 1800.6 2773.9 2175.5 2691.5 2688.2 2289.7 2292.5 2420.7 2026 2153.9 FALSE TRUE 1647.449515 2593.318606 2027.833121 2898.799796 2581.123302 2419.340835 2139.571508 2399.536075 2236.60995 2420.741393 0.680555767 1.071291057 0.837690935 1.197484293 1.066253219 0.999421434 0.883849681 0.991240156 0.92393593 1 11.24123325 -4.753061982 24.99944967 0.996544997 0.680555179 0.488941371 0.096993875 279.9762903 835428.5494 0.024293131 0.271999395 1.77E-05 4.753061982 -0.315989817 HQNVQLPR ddPTM_A459_MK2206_30min_R2 1 HQNVQLPR 8 0 A0A0U1RRM4;A0A087WUW5;A0A0D9SF20;K7EK45;A6NLN1;P26599;P26599-2;P26599-3 A0A0U1RRM4;A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 0 122.74 0.0087866 3475500 3878.3 6884.6 6254.2 7145.6 7403.3 6650.1 8503.3 5877 5620.8 7454.5 FALSE TRUE 4175.22563 6542.720775 6462.711906 6561.781622 7112.609243 6903.174215 7386.806496 6645.144079 6109.687024 7211.260275 0.578986955 0.90729228 0.896197289 0.909935486 0.986319863 0.957277085 1.024343348 0.921495526 0.847242616 1 12.8160357 -4.409088716 1.725797133 0.946223254 5.16E-14 0.819334264 0.050751781 1.254402636 1.598795044 0.014313127 2.689065065 3.90E-05 4.409088716 -0.946223254 HQPASASSTAAS(ph)PAHPAK ddPTM_A459_MK2206_30min_R1 1 HQPASASSTAASPAHPAK 18 0 Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-3 EP400 E1A-binding protein p400 1 HQPASASS(0.001)T(0.047)AAS(0.951)PAHPAK 109.84 0.00093909 1201400 4676.5 2625.4 3011.4 2731.2 3894.1 3161.3 4468.3 3404.7 2788.7 2862.6 TRUE FALSE 4278.739118 2454.485983 2806.994558 2941.557497 3738.989751 3340.290074 4170.22786 3374.933067 3078.595344 3217.2405 1.329940711 0.762916538 0.87248515 0.914310726 1.162172909 1.038246931 1.296212658 1.049014852 0.956905567 1 11.65160807 -6.2531777 24.68840789 1.09455666 0.948168642 0.097046608 0.162884419 1015.899376 3035815.084 0.047778913 0.060612254 5.58E-07 6.2531777 -0.146388019 HQPASASSTAAS(ph)PAHPAK ddPTM_A459_MK2206_30min_R2 3 HQPASASSTAASPAHPAK 18 0 Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-3 EP400 E1A-binding protein p400 1 HQPAS(0.001)AS(0.001)S(0.003)T(0.003)AAS(0.993)PAHPAK;HQPASAS(0.001)S(0.01)T(0.011)AAS(0.977)PAHPAK;HQPASASSTAAS(1)PAHPAK 101.2 0.0017211 4563500 25458.2 27948 21431.3 35263.7 34182.9 33517.2 40937 26129.5 25845 18909.7 TRUE FALSE 27407.29937 26560.14296 22145.80885 32382.54291 32840.70759 34792.72053 35561.92273 29544.71537 28092.95138 18292.67804 1.498266099 1.45195487 1.210637874 1.770246152 1.795292495 1.902002564 1.944052295 1.615111538 1.535748419 1 14.15897868 -3.771636573 14.65270069 1.607200964 1.470728748 0 0.287998343 0 0 0.067736241 0 0.000169186 3.771636573 -0.136472217 HQPS(ph)TPDPFLKPR ddPTM_A459_MK2206_30min_R2 1 HQPSTPDPFLKPR 13 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 HQPS(0.5)T(0.5)PDPFLKPR 66.326 0.031359 8404600 22594 22494 19128 22024 24491 18055 22898 17212 15008 18055 TRUE FALSE 24323.81401 21376.98067 19765.71797 20224.56875 23529.36028 18742.09568 19891.46509 19461.6675 16313.36871 17465.86683 1.392648544 1.223928986 1.131676897 1.157948182 1.347162469 1.073069883 1.138876489 1.11426863 0.934014262 1 14.09225062 -7.557331126 0.676347759 0.968620451 1.248143553 0.561279435 0.088881145 0.582304535 0.519235079 0.082842431 0.046456561 2.77E-08 7.557331126 0.279523102 HQPWQS(ph)PERPLSR ddPTM_A459_MK2206_30min_R1 2 HQPWQSPERPLSR 13 1 E7ES68;G5E9D5;Q9BQ52-2;Q9BQ52;J3QRS2;V9GYU5;J3QL08;V9GYS7 E7ES68 ELAC2 Zinc phosphodiesterase ELAC protein 2 1 HQPWQS(1)PERPLSR;HQPWQS(0.5)PERPLS(0.5)R 111.27 0.0074182 236430000 2935.8 3092.3 2863.3 2262.18 2537 2309.4 2886.9 2593.1 2729.2 3181.6 TRUE FALSE 2686.094794 2890.990708 2668.947174 2436.413496 2435.945918 2440.156232 2694.320168 2570.4288 3012.910107 3575.760628 0.75119536 0.808496711 0.746399844 0.681369294 0.681238531 0.682415991 0.753495675 0.718848119 0.842592785 1 11.80403445 -8.573930415 2.292728861 0.999764432 0.726797773 0.828747391 0.038541676 0.149915651 1.839133471 0.042004154 0.011499584 2.67E-09 8.573930415 -0.272966659 HQPWQS(ph)PERPLSR ddPTM_A459_MK2206_30min_R2 1 HQPWQSPERPLSR 13 1 E7ES68;G5E9D5;Q9BQ52-2;Q9BQ52;J3QRS2;V9GYU5;J3QL08;V9GYS7 E7ES68 ELAC2 Zinc phosphodiesterase ELAC protein 2 1 HQPWQS(0.991)PERPLS(0.009)R 66.436 0.040097 246770000 38199 48754 35029 55526 40779 42753 54854 45725 38163 54134 TRUE FALSE 41123.54481 46332.94725 36196.84938 50989.34818 39177.81156 44379.99537 47651.60391 51701.4145 41482.34876 52367.61201 0.785285852 0.884763415 0.691206797 0.973680988 0.748130573 0.847470291 0.909944183 0.987278444 0.79213749 1 15.6763872 -7.212215339 3.802509487 0.922335023 0.820556787 0.241335253 0.088458995 0.347540414 10.49006479 0.034269162 0.025080455 6.13E-08 7.212215339 -0.101778235 HQPWQSPERPLS(ph)R ddPTM_A459_MK2206_30min_R1 3 HQPWQSPERPLSR 13 1 E7ES68;G5E9D5;Q9BQ52-2;Q9BQ52;J3QRS2;V9GYU5;J3QL08;V9GYS7 E7ES68 ELAC2 Zinc phosphodiesterase ELAC protein 2 1 HQPWQS(0.007)PERPLS(0.993)R;HQPWQS(0.022)PERPLS(0.978)R;HQPWQS(0.482)PERPLS(0.518)R 91.932 0.010519 331193000 6779.1 6407.1 7342 6210.2 6162.1 6447.6 7421.3 5588.8 5451.3 6419.3 TRUE FALSE 6202.501947 5989.996625 6843.645496 6688.51068 5916.650509 6812.65754 6926.238618 5539.937711 6017.982143 7214.571347 0.859718706 0.83026369 0.948586571 0.927083587 0.820097304 0.944291381 0.960034669 0.767881755 0.834142717 1 12.81669796 -5.220797687 24.82685379 0.893776559 0.84499118 0.087262744 0.068997777 1386.538301 846991.6748 0.017927554 0.047430243 6.01E-06 5.220797687 -0.048785379 HQQIPLHS(ph)PPSK ddPTM_A459_MK2206_30min_R2 1 HQQIPLHSPPSK 12 0 Q8NDX5-2;Q8NDX5;Q8NDX5-7;E7EX82;C9JAU4 Q8NDX5-2 PHC3 Polyhomeotic-like protein 3 1 HQQIPLHS(0.866)PPS(0.134)K 105.17 0.0062408 12138000 143570 150280 130570 164650 169770 134200 186320 137140 128190 148920 TRUE FALSE 154561.8296 142817.3137 134923.1386 151197.5683 163103.9768 139307.075 161855.9602 155064.6689 139339.7345 144060.7526 1.072893393 0.991368649 0.936571108 1.04954032 1.132188843 0.967002272 1.123525716 1.076383859 0.967228978 1 17.13631782 -5.948403293 24.99767988 1.052165204 0.998331476 0.090967833 0.062203736 206.2407673 99918.36273 0.017245629 0.025579397 1.13E-06 5.948403293 -0.053833727 HQQQLLAS(ph)PGSSTVDNK ddPTM_A459_MK2206_30min_R1 2 HQQQLLASPGSSTVDNK 17 0 F2Z2X4;Q9C0E2 F2Z2X4 XPO4 Exportin-4 1 HQQQLLAS(0.998)PGS(0.002)STVDNK;HQQQLLAS(0.808)PGS(0.139)S(0.041)T(0.012)VDNK 287 1.41E-75 18137000 6389.8 6120 6274.7 5566.1 5496.4 4966.6 6439.7 6145.6 6114.4 6226.2 TRUE FALSE 5846.313956 5721.586888 5848.790846 5994.801986 5277.466749 5247.8046 6010.119363 6091.869667 6750.013761 6997.548661 0.835480286 0.817655891 0.835834251 0.856700293 0.754187931 0.749948997 0.858889256 0.870571962 0.964625483 1 12.7726339 -8.150082103 1.584927718 0.999465625 0.811212193 0.792793715 0.034258459 0.181214073 0.823217796 0.03457512 0.010798406 7.08E-09 8.150082103 -0.188253432 HQQQLLAS(ph)PGSSTVDNK ddPTM_A459_MK2206_30min_R2 4 HQQQLLASPGSSTVDNK 17 0 F2Z2X4;Q9C0E2 F2Z2X4 XPO4 Exportin-4 1 HQQQLLAS(0.997)PGS(0.002)ST(0.001)VDNK;HQQQLLAS(0.997)PGS(0.002)STVDNK;HQQQLLAS(0.933)PGS(0.046)S(0.015)T(0.005)VDNK;HQQQLLAS(0.999)PGS(0.001)STVDNK 101.62 0.0026254 106575800 200746 224309 204073 211730 229389 174531 258345 180466 171176 236948 TRUE FALSE 216115.2681 213170.1412 210876.692 194430.9817 220382.0353 181172.8995 224423.9912 204053.5258 186064.5791 229216.4062 0.942843803 0.929995129 0.919989522 0.848241995 0.961458383 0.7904011 0.979092182 0.890222167 0.811741979 1 17.80635078 -5.534547477 24.77798745 0.893572259 0.933562698 0.054023078 0.065386889 539.5463564 1145695.55 0.016713008 0.028976048 2.92E-06 5.534547477 0.039990439 HQQQLLASPGS(ph)STVDNK ddPTM_A459_MK2206_30min_R1 1 HQQQLLASPGSSTVDNK 17 0 F2Z2X4;Q9C0E2 F2Z2X4 XPO4 Exportin-4 1 HQQQLLAS(0.296)PGS(0.465)S(0.197)T(0.042)VDNK 161.91 1.22E-05 0 440.71 499.64 559.07 535.97 608.29 435.56 432.2 691.86 622.27 693.23 TRUE FALSE 403.2253002 467.1133452 521.1218861 577.2505023 584.0605212 460.2210308 403.3687266 685.811141 686.9571933 779.112566 0.517544342 0.599545387 0.668865975 0.740907704 0.749648442 0.590699022 0.517728431 0.880246541 0.881717512 1 9.605687973 -7.862133618 6.333415533 0.9198321 0.63528552 0.7380664 0.080436539 0.124576433 6.671198581 0.048885288 0.02321597 1.37E-08 7.862133618 -0.28454658 HQQQLLASPGS(ph)STVDNK ddPTM_A459_MK2206_30min_R2 1 HQQQLLASPGSSTVDNK 17 0 F2Z2X4;Q9C0E2 F2Z2X4 XPO4 Exportin-4 1 HQQQLLAS(0.19)PGS(0.693)S(0.09)T(0.027)VDNK 154.81 6.73E-05 22043000 26951 28913 29624 36592 36110 25061 51600 26280 28857 35045 TRUE FALSE 29014.38928 27477.22246 30611.64937 33602.31655 34692.13996 26014.71392 44824.85802 29714.88623 31366.9297 33901.48452 0.855844211 0.810502043 0.902958965 0.991175373 1.023322148 0.767362087 1.322209297 0.876506933 0.925237645 1 15.04906083 -5.566519342 3.085046471 0.987879519 0.834411683 0.176804915 0.133948562 0.426629087 8.246801156 0.03688221 0.075047674 2.71E-06 5.566519342 -0.153467836 HQS(ph)FGAAVLSR ddPTM_A459_MK2206_30min_R1 1 HQSFGAAVLSR 11 0 Q5VV41 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 HQS(1)FGAAVLSR 81.789 0.041219 9658600 1512.3 2949.8 2489 2169.8 1097.5 1114.6 1631.7 1603.6 2458.3 2494.7 TRUE FALSE 1383.670944 2757.767484 2320.053615 2336.918372 1053.784251 1177.707689 1522.85227 1589.579894 2713.849082 2803.76227 0.493505087 0.983595333 0.82747872 0.833493765 0.375846505 0.420045487 0.543146003 0.566945319 0.967931237 1 11.45314831 -10.52362801 7.30314713 1.000000017 0.664309222 0.181909052 0.211089427 6.21E-08 8.69E-09 0.218332879 0.052953498 2.99E-11 10.52362801 -0.335690795 HQS(ph)FGAAVLSR ddPTM_A459_MK2206_30min_R2 4 HQSFGAAVLSR 11 0 Q5VV41 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 HQS(1)FGAAVLSR;HQS(1)FGAAVLSR;HQS(1)FGAAVLSR;HQS(1)FGAAVLSR 139.21 0.00078536 33901500 86251.5 78825 89138 83292 106779 71479 92107 72128.8 58414.3 85905.7 TRUE FALSE 92854.98116 74910.66512 92109.81643 76486.77716 102586.3199 74199.18343 80013.24026 81556.28182 63495.07023 83102.60404 1.117353448 0.9014238 1.108386644 0.920389656 1.234453735 0.892862315 0.962824705 0.981392614 0.764056325 1 16.34260606 HRDYETATLSDIK ddPTM_A459_MK2206_30min_R1 2 HRDYETATLSDIK 13 1 O43707;O43707-2 O43707 ACTN4 Alpha-actinin-4 0 ; 99.539 0.0092871 24457000 9308.6 9488.4 8722.7 9250.4 9646.7 8423.8 8849.5 9665 7321.9 6817.8 FALSE TRUE 8516.854689 8870.703435 8130.627427 9962.867411 9262.451512 8900.748276 8259.166002 9580.499924 8083.037707 7662.440536 1.111506791 1.157686431 1.061101537 1.300221172 1.208812188 1.161607485 1.077876685 1.250319644 1.054890758 1 12.90358826 -8.472887008 6.178572647 1.000195942 1.164885688 0.397661996 0.069879677 0.183312715 15.93894376 0.067391644 0.017462159 3.37E-09 8.472887008 0.164689747 HRDYETATLSDIK ddPTM_A459_MK2206_30min_R2 2 HRDYETATLSDIK 13 1 O43707;O43707-2 O43707 ACTN4 Alpha-actinin-4 0 ; 103.83 0.017649 27463400 71490 87264 89622 94318 102349 84173 104759 74451 83815 88442 FALSE TRUE 76963.32937 82930.59665 92609.95275 86611.91769 98330.264 87376.2625 91004.01746 84182.00133 91105.0772 85556.14478 0.899565187 0.969311986 1.082446538 1.012340118 1.149306859 1.021273957 1.063675995 0.983938694 1.064857205 1 16.38458385 -5.003173376 3.257713004 1.048547769 0.902853538 0.521197542 0.045456731 0.18829999 3.956651185 0.011409205 0.052952432 9.93E-06 5.003173376 -0.145694231 HREDS(ph)DVEMVEDDSR ddPTM_A459_MK2206_30min_R2 1 HREDSDVEMVEDDSR 15 1 H0Y4N0;H0Y806;E7EUC9;A0A087WX20;A0A669KB03;A0A669KBB4;A0A669KBK2;H0Y818;A0A669KAW3;P40692-2;P40692-3;P40692 H0Y4N0 MLH1 DNA mismatch repair protein Mlh1 1 HREDS(1)DVEMVEDDSR 70.134 0.028922 7952000 11959 19217 11999 20590 21197 17311 19052 14825 11267 16946 TRUE FALSE 12874.59023 18262.71172 12399.04067 18907.73114 20364.69927 17969.78224 16550.44951 16762.6784 12246.98329 16393.05341 0.785368651 1.114051865 0.756359439 1.153398983 1.24227615 1.096182742 1.00960139 1.02254766 0.747083718 1 14.00079698 -8.13618791 9.360771456 0.873972973 1.030909074 0.127686603 0.154585981 0.656840088 46.14978222 0.105316932 0.039687982 7.31E-09 8.13618791 0.156936102 HRGS(ph)EEDPLLSPVETWK ddPTM_A459_MK2206_30min_R1 1 HRGSEEDPLLSPVETWK 17 1 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 HRGS(1)EEDPLLSPVETWK 98.76 0.015888 0 1123.2 1377.7 1407.5 1011.3 1218.8 1103.2 1211.2 1302.8 1053.3 975.13 TRUE FALSE 1027.665942 1288.01148 1311.962822 1089.190501 1170.252615 1165.662231 1130.403058 1291.409757 1162.794304 1095.936466 0.937705764 1.175261084 1.197115765 0.993844566 1.067810636 1.063622086 1.031449443 1.178361882 1.061005213 1 10.09794845 -5.774383417 24.99867346 1.063730253 1.110550929 0.059343548 0.080441561 674.2166803 1302105.492 0.022686564 0.033875584 1.68E-06 5.774383417 0.046820676 HRGS(ph)EEDPLLSPVETWK ddPTM_A459_MK2206_30min_R2 3 HRGSEEDPLLSPVETWK 17 1 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 HRGS(1)EEDPLLSPVETWK;HRGS(1)EEDPLLSPVETWK;HRGS(1)EEDPLLSPVETWK 142.23 0.00027463 10233300 65632 90287 75706 87335 77310 71705 78574 59850 59137 45863.5 TRUE FALSE 70656.83638 85803.47887 78230.00025 80199.45113 74274.42095 74433.78402 68257.13942 67672.6005 64280.62936 44366.97775 1.592554642 1.933949149 1.763248349 1.807638365 1.674092415 1.677684345 1.538467186 1.525292096 1.448839489 1 15.43719866 -8.737581459 0.391557264 0.938526063 1.814213279 0.875791599 0.085237339 0.532410711 0.192338755 0.152451795 0.066763609 1.83E-09 8.737581459 0.875687217 HRGSEEDPLLS(ph)PVETWK ddPTM_A459_MK2206_30min_R1 1 HRGSEEDPLLSPVETWK 17 1 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 HRGS(0.002)EEDPLLS(0.997)PVET(0.001)WK 54.859 0.034531 3069100 2156.9 1830.7 2181.3 2251.6 1795.1 1885.1 1780.2 2043.5 1348.4 1287.7 TRUE FALSE 1973.444329 1711.521097 2033.239433 2425.018622 1723.597366 1991.832733 1661.446106 2025.633895 1488.571005 1447.229998 1.363601039 1.182618589 1.404917972 1.675627665 1.19096299 1.37630697 1.148018013 1.399662734 1.02856561 1 10.4990785 -8.268902405 0.801118918 0.987315336 1.367821145 0.407722915 0.149838069 0.638493848 0.892069668 0.144261855 0.055711884 5.38E-09 8.268902405 0.380505809 HRHS(ph)PTGPPGFPR ddPTM_A459_MK2206_30min_R1 3 HRHSPTGPPGFPR 13 1 P98175-5;P98175-2;P98175 P98175-5 RBM10 RNA-binding protein 10 1 HRHS(1)PTGPPGFPR;HRHS(1)PTGPPGFPR;HRHS(0.999)PT(0.001)GPPGFPR 85.973 0.011599 11334600 4423.6 4393.8 4606.1 4004.8 4863.6 4821.2 5083.3 4405.6 4189 4221.9 TRUE FALSE 4047.349591 4107.762821 4293.450765 4313.25039 4669.872513 5094.172178 4744.202332 4367.082304 4624.46154 4744.940846 0.852982097 0.865714232 0.904848112 0.909020898 0.98417929 1.073600777 0.999844358 0.920366016 0.974608892 1 12.21217439 -6.05761807 2.108379725 0.992890611 0.871011766 0.683853396 0.036924495 0.212607717 1.878389553 0.013490633 0.020260882 8.76E-07 6.05761807 -0.121878845 HRHS(ph)PTGPPGFPR ddPTM_A459_MK2206_30min_R2 5 HRHSPTGPPGFPR 13 1 P98175-5;P98175-2;P98175 P98175-5 RBM10 RNA-binding protein 10 1 HRHS(1)PTGPPGFPR;HRHS(0.999)PT(0.001)GPPGFPR;HRHS(1)PTGPPGFPR;HRHS(0.982)PT(0.018)GPPGFPR;HRHS(0.994)PT(0.006)GPPGFPR 108.06 0.002742 76460300 122787.8 215417 150043 259738 226254 234896.8 232911.4 166252.2 145520 181795.8 TRUE FALSE 132188.5284 204719.705 155045.3587 238516.5745 217370.1311 243835.9623 202329.8534 187981.9334 158177.0666 175863.8179 0.751652784 1.164080863 0.881621703 1.35625723 1.236013944 1.386504428 1.150491646 1.068906246 0.899429277 1 17.42409917 -4.759368981 24.98176214 1.140928494 0.751652282 0.319059122 0.163386866 67.43343182 813458.8797 0.042331088 0.270278542 1.74E-05 4.759368981 -0.389276212 HRMS(ph)PGVAGSPR ddPTM_A459_MK2206_30min_R2 2 HRMSPGVAGSPR 12 1 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 HRMS(0.998)PGVAGS(0.002)PR;HRMS(0.983)PGVAGS(0.017)PR 73.296 0.030055 19854900 9996.2 18374.3 15069.7 18699.4 20100.5 23765.7 20391 37469 24877 12953.5 TRUE FALSE 10761.51676 17461.85898 15572.11628 17171.5992 19311.25337 24670.12037 17713.63721 42366.32695 27040.75649 12530.82836 0.858803301 1.393511944 1.242704459 1.37034829 1.541099505 1.968754153 1.413604648 3.380967782 2.157938464 1 13.61319417 -6.740890032 1.115730556 2.208354373 1.187769401 0.2580397 0.595468746 0.574955835 1.522307425 0.307358149 0.283263774 1.82E-07 6.740890032 -1.020584972 HRPELIDYGK ddPTM_A459_MK2206_30min_R2 2 HRPELIDYGK 10 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;G3V2N5;G3V2W4;G3V2X9 P12814-4 ACTN1 Alpha-actinin-1 0 ; 94.692 0.018767 10524700 132518 147868 132156 147540 150506 130442 154647 122963 124663 139596 FALSE TRUE 142663.68 140525.0901 136562.0151 135485.51 144596.3782 135406.0617 134341.6631 139034.6863 135505.9624 135040.994 1.0564472 1.040610603 1.011263403 1.003291712 1.070759137 1.002703385 0.994821344 1.029573926 1.003443165 1 17.0430379 -1.522878745 0.465538828 1.011792995 2.112264947 0.300635001 0.021102506 131.1280812 1.523439386 0.01303156 138.4856883 0.03 1.522878745 1.100471952 HRPELIEYDK ddPTM_A459_MK2206_30min_R1 4 HRPELIEYDK 10 1 O43707;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ;;; 107.06 0.01066 28616100 11469.2 14112.2 13809.4 11871.2 12218.8 12464 13245.2 11263.6 13818.5 14394.8 FALSE TRUE 10493.68431 13193.49321 12872.0564 12785.52188 11732.09932 13169.70091 12361.63688 11165.12353 15254.98252 16178.1365 0.648633686 0.815513778 0.795645185 0.790296329 0.725182367 0.814043132 0.764095227 0.690136564 0.942938176 1 13.98175782 -8.399289441 4.787715125 0.996694125 0.761652788 0.734464085 0.052254911 0.105852015 3.398030332 0.048724099 0.012720257 3.99E-09 8.399289441 -0.235041337 HRPELIEYDK ddPTM_A459_MK2206_30min_R2 4 HRPELIEYDK 10 1 O43707;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ;;; 133.91 0.0061732 62429800 242545 216277 232139 238698 220366 171287 263585 193722 183007 244074 FALSE TRUE 261114.4317 205536.9987 239878.3984 219195.6098 211713.3236 177805.4468 228975.9729 219042.1305 198924.6181 236109.8854 1.105902158 0.870514161 1.015960844 0.928362696 0.896672849 0.753062272 0.969785626 0.927712663 0.842508639 1 17.84909892 HRPS(ph)EADEEELAR ddPTM_A459_MK2206_30min_R2 2 HRPSEADEEELAR 13 1 A0A2R8Y611;O14617-3;O14617-2;O14617;O14617-5;O14617-4 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 HRPS(1)EADEEELAR;HRPS(1)EADEEELAR 90.561 0.011527 25377100 40489 48518 45067 49813 38344 36781 33530 30969.3 35464 27763 TRUE FALSE 43588.86897 46108.66667 46569.51129 45743.11856 36838.4219 38180.72673 29127.47072 35017.09384 38548.59462 26857.09558 1.622992659 1.716815079 1.733974217 1.703204221 1.371645783 1.421625306 1.084535393 1.303830257 1.435322539 1 14.71301567 -6.476033786 1.681561061 1.243615223 1.707211766 0.734448693 0.12720451 0.192268695 1.095577568 0.047932753 0.054382521 3.34E-07 6.476033786 0.463596542 HRPS(ph)PPATPPPK ddPTM_A459_MK2206_30min_R2 3 HRPSPPATPPPK 12 1 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 HRPS(1)PPATPPPK;HRPS(1)PPATPPPK;HRPS(1)PPATPPPK 101.62 0.0067972 30702100 155031 194756 158650 200615 184814 168316 183924 152359 157282 186276 TRUE FALSE 166900.2926 185084.7002 163939.3118 184224.1128 177557.2737 174721.3833 159774.5579 172272.8444 170962.1041 180197.8294 0.926205899 1.027119477 0.909774065 1.022343684 0.985346352 0.969608701 0.886661945 0.956020641 0.948746745 1 17.45922211 -7.024715036 24.89500397 0.94189852 0.976328044 0.071549576 0.04288752 1504.51747 1515468.011 0.015404211 0.011990025 9.45E-08 7.024715036 0.034429524 HRRLHS(ph)GENPY(ph)K ddPTM_A459_MK2206_30min_R1 1 HRRLHSGENPYK 12 2 Q86XN6 Q86XN6 ZNF761 Zinc finger protein 761 2 HRRLHS(1)GENPY(1)K 88.338 0.043195 5364100 1656.1 1549.6 1873.8 1405.1 1984.3 1894.8 1873.5 1559.8 1228.9 1041.6 TRUE FALSE 1515.239998 1448.720758 1746.611677 1513.321045 1905.261129 2002.081939 1748.522233 1546.162833 1356.648553 1170.641272 1.294367485 1.237544578 1.492012728 1.292728253 1.62753627 1.710243767 1.493644787 1.32078278 1.158893493 1 10.19308333 -8.294668448 1.987170551 1.013343984 1.452151902 0.52521505 0.142028473 0.280782181 2.085665404 0.148970953 0.043211445 5.07E-09 8.294668448 0.438807918 HRS(ph)EDCGGGPR ddPTM_A459_MK2206_30min_R2 2 HRSEDCGGGPR 11 1 Q9UGU0-2;Q9UGU0;A9JX13 Q9UGU0-2 TCF20 Transcription factor 20 1 HRS(1)EDCGGGPR;HRS(1)EDCGGGPR 81.625 0.02284 6659400 7799.8 1950.83 3293.4 5804.3 5787.2 3292.22 5882.1 13731.4 9306.2 6007.7 TRUE FALSE 8396.958685 1853.954619 3403.200312 5330.070123 5559.96545 3417.507739 5109.773204 15526.14113 10115.63645 5811.669241 1.44484456 0.319005529 0.585580523 0.917132394 0.956689932 0.588042367 0.879226431 2.671545899 1.740573325 1 12.50473688 -7.647437321 8.540214302 1.900844614 0.779036481 0.479096743 0.470368033 0.18150841 12.79037274 0.210292822 0.120923652 2.25E-08 7.647437321 -1.121808133 HRS(ph)NSFSDER ddPTM_A459_MK2206_30min_R1 1 HRSNSFSDER 10 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 HRS(0.997)NS(0.003)FSDER 92.943 0.014252 4358300 3132.1 2481 2815.4 2184.1 2405.1 2138.7 2250.5 2018.5 640.04 1078 TRUE FALSE 2865.698448 2319.486449 2624.298492 2352.31976 2309.299774 2259.791346 2100.373251 2000.852467 706.5744484 1211.550778 2.365314355 1.914477288 2.166065623 1.941577524 1.906069325 1.86520564 1.733623789 1.651480485 0.583198378 1 10.24263916 -8.05550812 2.270000938 0.787878634 1.989111568 0.843496758 0.200673309 0.113734424 1.065911395 0.16613446 0.054193539 8.80E-09 8.05550812 1.201232934 HRS(ph)NSFSDER ddPTM_A459_MK2206_30min_R2 2 HRSNSFSDER 10 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 HRS(0.998)NS(0.002)FSDER;HRS(0.999)NS(0.001)FSDER 105.25 0.0069428 37486000 82384 123602 102971 127939 115712 101496 83193 69567 87579 68834 TRUE FALSE 88691.38238 117464.1044 106404.0017 117485.9744 111168.5655 105358.5014 72269.65917 78659.64576 95196.46311 66587.95222 1.331943384 1.764044403 1.597946749 1.764372841 1.669499688 1.582245705 1.085326351 1.181289455 1.429634941 1 16.02297355 -7.193090428 5.681515725 1.189815877 1.636544931 0.66834136 0.153039209 0.131434966 8.09307814 0.057757603 0.04423886 6.41E-08 7.193090428 0.446729054 HRS(ph)PSGAGEGASCSDGPR ddPTM_A459_MK2206_30min_R1 1 HRSPSGAGEGASCSDGPR 18 1 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 HRS(0.994)PS(0.006)GAGEGASCSDGPR 69.03 0.014523 667180 596.71 501.42 555.69 831.66 628.08 727.3 1152.2 623.53 418.53 519.32 TRUE FALSE 545.9566811 468.7774669 517.971311 895.7145973 603.0622436 768.4790975 1075.33884 618.0785429 462.0376912 583.6572823 0.935406269 0.80317248 0.887457977 1.534658479 1.033247185 1.316661542 1.842414843 1.058975124 0.791624992 1 9.188977671 -5.654994437 9.497043966 1.249065438 0.86398571 0.240292587 0.283040449 0.402486079 33.08115637 0.079621296 0.138020108 2.21E-06 5.654994437 -0.385079728 HRSNS(ph)FSDER ddPTM_A459_MK2206_30min_R2 2 HRSNSFSDER 10 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 HRS(0.087)NS(0.842)FS(0.071)DER;HRS(0.38)NS(0.573)FS(0.046)DER 74.392 0.034397 22595000 5479.5 44568 29372 71592 105446 128929 68514 34370 122661 26996 TRUE FALSE 5899.014733 42354.81793 30351.24782 65742.70459 101305.6602 133835.4834 59518.0295 38862.27701 133329.8321 26115.12273 0.225885009 1.621850235 1.162209657 2.51741894 3.879195256 5.124826899 2.279063748 1.488113895 5.105464502 1 14.67259786 -5.851435233 3.095562532 3.227125011 1.021157073 0.343073834 1.321908507 0.286535247 5.494139775 0.388461474 0.632959129 1.41E-06 5.851435233 -2.205967939 HS(ph)AGSGAEESNSSSTVQK ddPTM_A459_MK2206_30min_R2 1 HSAGSGAEESNSSSTVQK 18 0 Q8IYL3 Q8IYL3 C1orf174 UPF0688 protein C1orf174 1 HS(0.657)AGS(0.343)GAEESNSSSTVQK 138.04 0.00022362 7188900 25466 32499 30353 36977 35336 30924 42575 28731 30996 26655 TRUE FALSE 27415.69654 30885.14692 31364.95387 33955.86082 33948.53109 32100.83449 36984.85136 32486.24035 33691.97605 25785.24953 1.063231772 1.197783519 1.216391326 1.316871523 1.316587262 1.244930147 1.434341417 1.259876904 1.30663758 1 14.65425839 -4.696462535 1.201746179 1.285638185 0.933710837 0.237209087 0.105314478 2.205632715 2.383560071 0.029834491 1.02195625 2.01E-05 4.696462535 -0.351927347 HS(ph)ASPVVFTSAR ddPTM_A459_MK2206_30min_R1 1 HSASPVVFTSAR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 HS(0.777)AS(0.223)PVVFTSAR 126.32 0.0027517 8124500 1326.3 1342.2 1343.8 1000.9 1454.1 1283.2 1420.9 1540.2 1320.2 1042.8 TRUE FALSE 1213.49122 1254.822536 1252.5866 1077.989491 1396.180118 1355.853675 1326.114354 1526.734194 1457.439514 1171.989937 1.035410956 1.070676886 1.068769075 0.919794153 1.191290193 1.15688167 1.131506604 1.302685412 1.243559751 1 10.19474447 -6.29011182 24.54447629 1.183442255 1.030242794 0.420405723 0.083841088 535.0094182 457982.6505 0.025889781 0.029362179 5.13E-07 6.29011182 -0.153199462 HS(ph)ASPVVFTSAR ddPTM_A459_MK2206_30min_R2 1 HSASPVVFTSAR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 HS(0.582)AS(0.413)PVVFT(0.004)S(0.001)AR 81.239 0.038617 7030000 25362 32174 40163 33541 28421 26467 34988 29677 30513 26488 TRUE FALSE 27303.73422 30576.28595 41502.01437 30800.59301 27305.04874 27474.22023 30394.03357 33555.8858 33166.96559 25623.69873 1.06556569 1.193281511 1.619673054 1.202035402 1.065616991 1.072219141 1.186168862 1.309564484 1.294386339 1 14.64519112 -10.49539801 4.011246912 0.999983557 1.225708643 0.15450675 0.156513849 118232475.1 270561359.1 29546.19755 0.041966032 3.20E-11 10.49539801 0.225725086 HS(ph)FNSFR ddPTM_A459_MK2206_30min_R1 1 HSFNSFR 7 0 P51828 P51828 ADCY7 Adenylate cyclase type 7 1 HS(0.999)FNS(0.001)FR 93.429 0.025721 3383200 394.57 804.72 301.14 196.29 374.87 493.97 497.13 299.76 254.72 252.11 TRUE FALSE 361.0097495 752.3325817 280.6994558 211.4082898 359.9381341 521.9381545 463.9673648 297.1392299 281.1990555 283.3432901 1.274107283 2.655198157 0.990669148 0.746120685 1.270325244 1.84206993 1.637474332 1.048689841 0.992432379 1 8.146407228 -1.522878745 0.298246152 1.150054783 6.82522269 0.104269979 0.507481762 125.370179 1.785580998 0.552372554 378.8320121 0.03 1.522878745 5.675167907 HS(ph)FNSFR ddPTM_A459_MK2206_30min_R2 1 HSFNSFR 7 0 P51828 P51828 ADCY7 Adenylate cyclase type 7 1 HS(0.997)FNS(0.003)FR 100.02 0.020839 1197400 2357.5 1500.3 1129.3 2766.9 3129.4 2937.4 2233.9 2091.9 1163.4 2537.3 TRUE FALSE 2537.992013 1425.797284 1166.950298 2540.835419 3006.524032 3049.184815 1940.586247 2365.318513 1264.590429 2454.508109 1.034012478 0.580889213 0.475431429 1.035170921 1.224898798 1.242279382 0.790621241 0.963662945 0.515211347 1 11.26121822 -4.478103408 22.79804801 0.87739593 2.676998563 0.033300628 0.262576483 636.993584 818931.702 0.068800239 83779.50348 3.33E-05 4.478103408 1.799602633 HS(ph)HSHSPMSTR ddPTM_A459_MK2206_30min_R2 1 HSHSHSPMSTR 11 0 P62995 P62995 TRA2B Transformer-2 protein homolog beta 1 HS(0.599)HS(0.373)HS(0.018)PMS(0.005)T(0.005)R 68.277 0.037748 2896000 443.38 650.46 0 2752.9 3144.6 2072.7 1135.4 2540.5 1312.2 3131.7 TRUE FALSE 477.3255137 618.1591023 0 2527.979264 3021.127204 2151.578051 986.3206161 2872.552073 1426.332784 3029.512885 0.157558503 0.204045708 0 0.834450738 0.997232003 0.710205941 0.325570695 0.948189422 0.470812582 1 11.56487013 -5.763578958 24.99999528 0.743357637 0.128885768 0.65063282 0.212974236 34.86805167 407425.6657 0.059541893 0.093433851 1.72E-06 5.763578958 -0.614471869 HS(ph)LEEGLDMVNR ddPTM_A459_MK2206_30min_R1 2 HSLEEGLDMVNR 12 0 Q7Z309-2;Q7Z309;Q7Z309-5 Q7Z309-2 FAM122B Protein FAM122B 1 HS(1)LEEGLDMVNR;HS(1)LEEGLDMVNR 129.76 0.0022633 6031800 3041.3 2956.7 3087.4 2939.2 2989.9 3218.6 3374.9 2874.9 2599.8 2395.8 TRUE FALSE 2782.621464 2764.218293 2877.83589 3165.577693 2870.805952 3400.834351 3149.766579 2849.765052 2870.058513 2692.609791 1.033429156 1.026594459 1.068790546 1.175654082 1.066179719 1.263025323 1.169782042 1.058365405 1.065902131 1 11.39478946 -5.548340696 6.900377901 1.123223006 1.034048149 0.179341132 0.071032168 0.249175167 43.79651703 0.019662361 0.035029695 2.83E-06 5.548340696 -0.089174857 HS(ph)LEEGLDMVNR ddPTM_A459_MK2206_30min_R2 1 HSLEEGLDMVNR 12 0 Q7Z309-2;Q7Z309;Q7Z309-5 Q7Z309-2 FAM122B Protein FAM122B 1 HS(1)LEEGLDMVNR 115.12 0.0035293 2360100 21024 23385 21174 29868 22848 23272 27502 21792 18796 20218 TRUE FALSE 22633.6136 22223.7349 21879.93059 27427.68886 21950.87272 24157.63227 23890.95436 24640.28922 20430.8421 19558.28832 1.157238979 1.136282201 1.118703756 1.402356301 1.122330971 1.235160863 1.22152583 1.259838736 1.044612993 1 14.25549249 -8.378657082 4.801072108 1.004003941 1.206234692 0.459073994 0.080495632 0.197607069 6.499841335 0.076936279 0.020121076 4.18E-09 8.378657082 0.202230751 HS(ph)PIAPSSPSPQVLAQK ddPTM_A459_MK2206_30min_R2 1 HSPIAPSSPSPQVLAQK 17 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 HS(1)PIAPSSPSPQVLAQK 192.24 1.32E-20 0 9863.2 6330.6 11515 10114 9859.4 6488.5 9503.7 8708.4 5882.9 8369.1 TRUE FALSE 10618.33418 6016.23161 11898.90435 9287.653847 9472.270416 6735.424414 8255.852774 9846.61778 6394.584008 8096.016952 1.311550388 0.743110056 1.469723251 1.147188043 1.169991426 0.831942973 1.019742526 1.216229887 0.789843209 1 12.9829966 -6.717747739 24.99105635 0.988077826 1.16026194 0.188346679 0.202437408 267.2176532 152844.2289 0.065008215 0.065007852 1.92E-07 6.717747739 0.172184114 HS(ph)PIKEEPCGSLSETVCK ddPTM_A459_MK2206_30min_R2 2 HSPIKEEPCGSLSETVCK 18 1 J3QQY0;J3KSZ8;Q68DK7;Q68DK7-2;J3KTC2;Q68DK7-3 J3QQY0 MSL1 Male-specific lethal 1 homolog 1 HS(1)PIKEEPCGSLSETVCK;HS(0.992)PIKEEPCGS(0.007)LS(0.001)ETVCK 103.39 0.0011376 12209800 106171 89703 87078 86015 83766 52227 123881 87272 59641 88318 TRUE FALSE 114299.5334 85248.47946 89981.13706 78987.29935 80476.92595 54214.53508 107615.2759 98678.75005 64828.46637 85436.19089 1.337835081 0.997802905 1.053196966 0.924518035 0.941953581 0.634561706 1.259598242 1.15499941 0.758793969 1 16.38255971 -3.319753544 1.337003838 0.964363228 16.59793663 0.299304391 0.169241618 82.52552836 4.514798731 0.049722333 3694.844329 0.000478902 3.319753544 15.63357341 HS(ph)PNPLLVAPTPPALQK ddPTM_A459_MK2206_30min_R2 1 HSPNPLLVAPTPPALQK 17 0 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L "Histone-lysine N-methyltransferase, H3 lysine-79 specific" 1 HS(1)PNPLLVAPTPPALQK 64.454 0.030226 2429800 29154 27924 28104 28964 28087 24879 30559 21503 25181 25370 TRUE FALSE 31386.05266 26537.33477 29040.97333 26597.54855 26984.16325 25825.78778 26546.56659 24313.51593 27371.19786 24542.17898 1.278861697 1.081294973 1.183308677 1.083748455 1.099501527 1.052302153 1.081671135 0.990682855 1.115271708 1 14.58297572 -1.522878745 0.338993209 1.03590852 3.214452688 0.608283782 0.050159408 40.10180483 0.568553644 0.041037674 55.23808227 0.03 1.522878745 2.178544168 HS(ph)PPMVR ddPTM_A459_MK2206_30min_R1 1 HSPPMVR 7 0 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256;I3L4G9 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 HS(1)PPMVR 82.426 0.027242 8949400 2115.6 2382.6 1858.2 1679.8 1498.3 1956.1 2419.4 1696.9 2499.6 3276.5 TRUE FALSE 1935.657111 2227.492307 1732.070561 1809.178487 1438.619538 2066.852692 2258.00624 1682.064182 2759.442365 3682.417556 0.525648458 0.604899437 0.470362346 0.491301831 0.390672572 0.561276026 0.613185823 0.456782577 0.749356183 1 11.84643751 -8.52694751 3.080452808 0.999191943 0.516157108 0.847444074 0.065429494 0.086395381 2.075098842 0.065487913 0.0174387 2.97E-09 8.52694751 -0.483034835 HS(ph)PPMVR ddPTM_A459_MK2206_30min_R2 2 HSPPMVR 7 0 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256;I3L4G9 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 HS(1)PPMVR;HS(1)PPMVR 78.149 0.03252 8821800 28425 20474.1 22370 22570.7 18982.7 18367.2 26524 20700 15547 17552.8 TRUE FALSE 30601.23986 19457.38597 23115.80464 20726.60161 18237.34382 19066.17667 23041.36694 23405.56107 16899.24996 16980.05357 1.802187474 1.145896618 1.361350513 1.220644065 1.074045128 1.122857274 1.356966681 1.378415031 0.995241263 1 14.05155339 -4.758146278 24.97874522 1.202516489 1.802188313 0.641655953 0.137979823 59.86074407 453979.4234 0.034060572 0.238376258 1.75E-05 4.758146278 0.599671824 HS(ph)PQQPSNGSLR ddPTM_A459_MK2206_30min_R1 2 HSPQQPSNGSLR 12 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 HS(0.996)PQQPS(0.003)NGS(0.001)LR;HS(1)PQQPSNGSLR 135.04 0.001523 31324000 2600.52 2309.93 2100.42 1641.72 2180.26 1900.24 2485.27 1850.94 2212.61 1665.23 TRUE FALSE 2379.332118 2159.553137 1957.849343 1768.165559 2093.415627 2007.829947 2319.482173 1834.757427 2442.618727 1871.531264 1.271329079 1.153896373 1.046121633 0.944769448 1.118557658 1.072827361 1.239349947 0.980350936 1.305144495 1 10.87000343 HS(ph)PSPPPPTPTESR ddPTM_A459_MK2206_30min_R2 1 HSPSPPPPTPTESR 14 0 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 HS(0.745)PS(0.246)PPPPT(0.008)PTESR 119.88 0.0025119 0 5332.2 6168.3 5679 6197.6 6599.3 5806 6523.3 7375.7 7623.2 6876.8 TRUE FALSE 5740.437332 5861.991192 5868.335026 5691.236255 6340.178323 6026.951398 5666.782874 8339.729315 8286.252156 6652.410579 0.86291086 0.881183012 0.882136626 0.855514882 0.953064795 0.905980069 0.851839015 1.253640198 1.245601434 1 12.6996615 -7.757782785 24.99856193 1.187215645 0.886760251 0.766236646 0.071030711 37.7592775 258149.4176 0.033288346 0.018252305 1.75E-08 7.757782785 -0.300455394 HS(ph)PTEDEESAK ddPTM_A459_MK2206_30min_R1 2 HSPTEDEESAK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HS(0.608)PT(0.392)EDEESAK;HS(0.634)PT(0.366)EDEESAK 169.09 0.00044143 16534600 4737.7 4739 3962.5 2443.8 1716.12 2643 5341.3 3814.4 883.67 7907.3 TRUE FALSE 4334.733736 4430.490239 3693.53654 2632.021899 1647.763306 2792.644376 4984.991623 3781.051103 975.5306587 8886.916021 0.487765804 0.498540802 0.415615106 0.296168198 0.185414524 0.314242238 0.560936056 0.42546268 0.109771563 1 13.11746714 -11.11627787 3.803114219 1.017906813 0.369945015 0.664783511 0.135037664 71740326.8 71601470.58 10049441.51 0.034503403 7.65E-12 11.11627787 -0.647961798 HS(ph)PTGPPGFPR ddPTM_A459_MK2206_30min_R2 1 HSPTGPPGFPR 11 0 P98175-5;P98175-2;P98175 P98175-5 RBM10 RNA-binding protein 10 1 HS(0.614)PT(0.386)GPPGFPR 75.102 0.035663 8389500 19285 18457 14980 19049 18067 12183 18934 15936 14066 14509 TRUE FALSE 20761.47443 17540.45222 15479.42572 17492.63577 17357.5988 12646.6326 16447.94306 18018.88992 15289.43525 14035.57252 1.479203958 1.249714053 1.102870988 1.246307248 1.236686197 0.901041449 1.171875464 1.283801562 1.089334634 1 13.77680029 HS(ph)PTPQQSNR ddPTM_A459_MK2206_30min_R2 3 HSPTPQQSNR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 HS(0.994)PT(0.006)PQQSNR;HS(1)PTPQQSNR;HS(1)PTPQQSNR 110.31 0.0063103 15817700 37358.2 10220 22174.7 19485.9 30295.1 20909.5 26894.7 136081 69580.5 30477.4 TRUE FALSE 40218.37252 9712.489661 22913.99343 17893.83964 29105.56215 21705.22567 23363.39358 153867.2539 75632.48612 29482.92493 1.364124238 0.329427616 0.777195393 0.606922131 0.987200633 0.736196484 0.792438119 5.218859875 2.565297924 1 14.84759204 -7.691716351 16.30499963 3.168921503 0.777266838 0.485706702 0.994523974 1.669988061 389.5529547 0.432707505 0.249807714 2.03E-08 7.691716351 -2.391654666 HS(ph)QFIGYPITLFVEK ddPTM_A459_MK2206_30min_R1 1 HSQFIGYPITLFVEK 15 0 P07900;P07900-2;G3V2J8;Q58FG0 P07900 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 1 HS(0.978)QFIGY(0.022)PITLFVEK 77.562 0.022917 792110 368.36 519.65 419.46 462.33 518.88 702.87 740.72 445.91 616.2 368.5 TRUE FALSE 337.0290477 485.8206905 390.9882239 497.9387367 498.2119109 742.665892 691.3079203 442.0114559 680.2561951 414.152562 0.813779941 1.173047652 0.944068104 1.202307513 1.20296711 1.793218152 1.669210778 1.067267226 1.642525623 1 8.694018503 -6.244650014 2.12488924 1.448506913 1.006662949 0.347286196 0.257401116 0.353153675 3.130672378 0.085728664 0.112035401 5.69E-07 6.244650014 -0.441843965 HS(ph)S(ph)ISPVRLPLNSSLGAELSR ddPTM_A459_MK2206_30min_R1 1 HSSISPVRLPLNSSLGAELSR 21 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 HS(0.707)S(0.646)IS(0.647)PVRLPLNSSLGAELSR 63.936 0.0086811 9311900 1295.6 1307.5 1190 788.46 1076.3 981.53 1172.9 1250.1 891.12 1006 TRUE FALSE 1185.402417 1222.381512 1109.226116 849.1873258 1033.428692 1037.10338 1094.657981 1239.170507 983.7551129 1130.630875 1.048443345 1.081149949 0.981068305 0.751073887 0.914028367 0.917278489 0.968183344 1.095999176 0.870093976 1 10.14291228 -5.516160533 24.99178353 0.929907826 1.056374796 0.284603993 0.084030895 393.8480619 1465113.7 0.023981006 0.043652176 3.05E-06 5.516160533 0.126466971 HS(ph)SEDFR ddPTM_A459_MK2206_30min_R2 1 HSSEDFR 7 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 HS(0.63)S(0.37)EDFR 88.177 0.03262 18944000 116740 103270 105970 116370 111800 110460 127120 114570 93595 121400 TRUE FALSE 125677.7042 98141.76197 109502.9869 106862.1988 107410.1703 114663.6327 110428.9913 129544.6924 101735.7239 117438.7279 1.07015553 0.835684818 0.932426541 0.909940023 0.914606043 0.976369846 0.940311541 1.103083239 0.866287686 1 16.84154872 -6.982880924 2.216680333 0.986375163 0.926214489 0.065360253 0.077440659 0.714807887 7.071585995 0.031204412 0.024823537 1.04E-07 6.982880924 -0.060160674 HS(ph)SGEQDTSTLPSPPLLTTVEDVNQDNK ddPTM_A459_MK2206_30min_R2 2 HSSGEQDTSTLPSPPLLTTVEDVNQDNK 28 0 O15063;A0A0J9YXL1 O15063 KIAA0355 Uncharacterized protein KIAA0355 1 HS(0.435)S(0.435)GEQDT(0.088)S(0.021)T(0.021)LPS(0.001)PPLLTTVEDVNQDNK;HS(0.488)S(0.488)GEQDT(0.014)S(0.005)T(0.005)LPSPPLLTTVEDVNQDNK 91.985 4.98E-05 3379400 9128 12960.9 9839 10155.9 11849 11504.8 15860.3 10030.7 10797 9044.2 TRUE FALSE 9826.846698 12317.28055 10167.02735 9326.130483 11383.74872 11942.62323 13777.82356 11341.74693 11736.10354 8749.088495 1.123185199 1.407835863 1.162067038 1.065954526 1.301135396 1.365013422 1.574772454 1.296334691 1.341408714 1 13.09491701 -6.508120882 22.17358069 1.348324729 1.200882504 0.112020699 0.156274361 283.323378 425692.6783 0.048597513 0.053070679 3.10E-07 6.508120882 -0.147442225 HS(ph)SISPVRLPLNSSLGAELSR ddPTM_A459_MK2206_30min_R1 1 HSSISPVRLPLNSSLGAELSR 21 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 HS(0.441)S(0.441)IS(0.116)PVRLPLNSSLGAELSR 50.232 0.026539 1987300 260.77 382.97 508.94 371.1 504.09 318.19 559.62 391.39 363.7 314.08 TRUE FALSE 238.5901421 358.0385834 474.3945708 399.6821863 484.0110279 336.2056428 522.2887709 387.9681185 401.5079165 352.9906016 0.67591075 1.014300612 1.34392975 1.1322743 1.371172563 0.952449276 1.479610983 1.099089088 1.137446478 1 8.463485962 -4.864310313 3.106815317 1.199273272 0.641046226 0.493057753 0.158297935 0.229427843 3.631182064 0.037459717 0.285273067 1.37E-05 4.864310313 -0.558227046 HS(ph)SISPVRLPLNSSLGAELSR ddPTM_A459_MK2206_30min_R2 1 HSSISPVRLPLNSSLGAELSR 21 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 HS(0.35)S(0.35)IS(0.3)PVRLPLNSSLGAELSR 58.479 0.010672 8370300 5851.1 13418 8533.4 21392 19060 33119 17279 12202 19248 7985.3 TRUE FALSE 6299.064715 12751.68163 8817.899297 19644.20517 18311.60863 34379.36675 15010.24654 13796.8433 20922.15625 7724.740315 0.81544032 1.650758616 1.14151401 2.543024667 2.370514462 4.450553074 1.943139307 1.786059173 2.708460789 1 12.91527072 -5.763136515 24.97765263 2.498146804 1.247389558 0.287208953 0.854076635 54.47594868 801773.7356 0.239339467 0.376998837 1.73E-06 5.763136515 -1.250757246 HS(ph)SNPPLESHVGWVMDSR ddPTM_A459_MK2206_30min_R1 5 HSSNPPLESHVGWVMDSR 18 0 Q6PKG0;Q6PKG0-3;H0YC33;H0YBR8 Q6PKG0 LARP1 La-related protein 1 1 HS(0.567)S(0.433)NPPLESHVGWVMDSR;HS(0.831)S(0.169)NPPLESHVGWVMDSR;HS(0.582)S(0.418)NPPLESHVGWVMDSR;HS(0.5)S(0.5)NPPLESHVGWVMDSR;HS(0.5)S(0.5)NPPLESHVGWVMDSR 157.53 1.36E-05 79716400 11452.1 10423.9 10358.8 9670.2 11836 11123.9 11246.6 10665.8 9105.4 7985.1 TRUE FALSE 10478.03876 9745.302215 9655.673517 10415.00048 11364.54706 11753.7256 10496.35983 10572.55004 10051.93891 8974.354472 1.167553476 1.085905649 1.075918446 1.160529207 1.266335879 1.30970151 1.169594968 1.178084738 1.120073755 1 13.13159245 -4.333772803 20.73631112 1.162119329 46.65882592 0 0.086165261 19271.71426 2116500.118 0.022040976 64995.85987 4.64E-05 4.333772803 45.49670659 HS(ph)SNPPLESHVGWVMDSR ddPTM_A459_MK2206_30min_R2 3 HSSNPPLESHVGWVMDSR 18 0 Q6PKG0;Q6PKG0-3;H0YC33;H0YBR8 Q6PKG0 LARP1 La-related protein 1 1 HS(0.5)S(0.5)NPPLESHVGWVMDSR;HS(0.5)S(0.5)NPPLESHVGWVMDSR;HS(0.555)S(0.445)NPPLESHVGWVMDSR 98.684 0.0016745 12772500 21400.2 27309.6 21736.4 29550.4 26861.6 28485.5 34199 23130 24234.9 29521 TRUE FALSE 23038.61577 25953.44498 22461.08073 27136.03779 25806.87862 29569.53566 29708.63022 26153.17042 26342.8078 28557.73219 0.806738281 0.908806232 0.78651486 0.950216831 0.903673949 1.035430106 1.04030075 0.915799975 0.922440466 1 14.8015938 -6.052223995 1.8940639 0.975935507 0.842225681 0.531515048 0.055471839 0.284027397 2.033074291 0.018651908 0.028814346 8.87E-07 6.052223995 -0.133709825 HS(ph)SPHISR ddPTM_A459_MK2206_30min_R2 2 HSSPHISR 8 0 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 HS(0.634)S(0.366)PHISR;HS(0.5)S(0.5)PHIS(0.001)R 91.549 0.017668 4153340 2171.01 7543.2 6537.5 13264.2 13173 15500.3 9872.7 12283.3 17411.8 19048.5 TRUE FALSE 2337.224195 7168.615657 6755.456987 12180.47243 12655.76183 16090.17478 8576.402631 13888.76948 18926.24689 18426.949 0.126837286 0.389028898 0.366607461 0.661014063 0.686807231 0.873187133 0.465427165 0.753720515 1.027096069 1 14.1695296 -5.580329633 0.408282959 0.910753676 3.32E-27 0.735868543 0.143596792 1.779566327 0.375848952 0.134554947 0.745804537 2.63E-06 5.580329633 -0.910753676 down HS(ph)SPSGTVAAR ddPTM_A459_MK2206_30min_R1 1 HSSPSGTVAAR 11 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 HS(0.602)S(0.394)PS(0.004)GTVAAR 89.561 0.029063 666540 722.33 848.19 664.32 641.21 688.97 757.18 849.76 657.81 332.64 892.01 TRUE FALSE 660.8920404 792.9726768 619.2278093 690.5961053 661.526866 800.0508773 793.0740609 652.0588365 367.2191184 1002.518933 0.65923148 0.79098025 0.617671935 0.688860911 0.659864711 0.798040666 0.79108138 0.650420471 0.366296442 1 9.969413768 HS(ph)SPSGTVAAR ddPTM_A459_MK2206_30min_R2 2 HSSPSGTVAAR 11 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 HS(0.931)S(0.068)PS(0.001)GTVAAR;HS(0.617)S(0.38)PS(0.001)GT(0.003)VAAR 111.5 0.0082133 15012400 74810 93110 70883 92835 78572 78243 98956 79116 74226 95293 TRUE FALSE 80537.51112 88486.29279 73246.20384 85250.08354 75486.86849 81220.59219 85962.95833 89456.73285 80682.04331 92183.59721 0.873664226 0.959891949 0.794568731 0.92478582 0.818875275 0.881074233 0.932519026 0.970419202 0.875232099 1 16.49222245 -7.282860966 4.375641003 0.943259579 0.8749701 0.292634345 0.052848235 0.282739388 13.55444125 0.021440004 0.014791821 5.21E-08 7.282860966 -0.068289478 HS(ph)SSENNSHYVR ddPTM_A459_MK2206_30min_R2 1 HSSSENNSHYVR 12 0 Q4KWH8-2;A0A2U3TZV8;Q4KWH8;Q4KWH8-3;Q4KWH8-4 Q4KWH8-2 PLCH1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1" 1 HS(0.991)S(0.008)S(0.001)ENNSHYVR 104.9 0.0069686 0 4159.5 5076.1 4375.8 4410.7 4477.5 5322.8 3655.6 5858.8 4882.8 5877.7 TRUE FALSE 4477.954518 4824.028255 4521.686988 4050.331701 4301.690852 5525.362884 3175.615329 6624.565276 5307.497118 5685.91113 0.787552675 0.848417808 0.795244049 0.712345235 0.756552601 0.971763849 0.558505973 1.16508421 0.933447076 1 12.47317583 -7.775464682 24.9999966 1.036949207 0.7836719 0.52576997 0.111686597 184.8133523 329423.5462 0.056917032 0.027555629 1.68E-08 7.775464682 -0.253277308 HS(ph)SYPAGTEDDEGMGEEPSPFR ddPTM_A459_MK2206_30min_R2 1 HSSYPAGTEDDEGMGEEPSPFR 22 0 Q92934 Q92934 BAD Bcl2-associated agonist of cell death 1 HS(0.5)S(0.5)YPAGTEDDEGMGEEPSPFR 149.12 2.78E-08 0 5254.4 7250 6970.2 8326 6675.9 6909.6 10481 8234.2 8945.7 6062.9 TRUE FALSE 5656.680904 6889.975542 7202.582989 7645.739166 6413.770622 7172.54967 9104.83211 9310.438212 9723.780816 5865.06807 0.964469779 1.174747754 1.228047638 1.303606212 1.093554337 1.222926927 1.552383025 1.587439072 1.657914401 1 12.51793214 -7.180861968 4.875095181 1.497954556 1.166782354 0.345718909 0.188282621 0.218330221 9.247432487 0.070944492 0.054073171 6.59E-08 7.180861968 -0.331172202 HS(ph)YPPALGSPGALAGAGVGAAGPLER ddPTM_A459_MK2206_30min_R1 3 HSYPPALGSPGALAGAGVGAAGPLER 26 0 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 HS(1)YPPALGSPGALAGAGVGAAGPLER;HS(1)YPPALGSPGALAGAGVGAAGPLER;HS(0.997)Y(0.003)PPALGSPGALAGAGVGAAGPLER 179.95 9.85E-22 116162000 5763.3 6132.6 5857.6 4854.6 4629.9 5249 6209 4955.8 6397.9 6306.6 TRUE FALSE 5273.101071 5733.366625 5460.002432 5228.502133 4445.481279 5546.193844 5794.808939 4912.471963 7062.9846 7087.90922 0.743957196 0.808893913 0.770326236 0.73766494 0.627192186 0.78248658 0.817562522 0.69307772 0.996483502 1 12.79114441 -8.269746254 24.96606377 0.998241815 0.749587008 0.781986294 0.052919077 308.203091 926283.2293 0.050145456 0.013808173 5.37E-09 8.269746254 -0.248654807 HS(ph)YPPALGSPGALAGAGVGAAGPLER ddPTM_A459_MK2206_30min_R2 3 HSYPPALGSPGALAGAGVGAAGPLER 26 0 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 HS(0.556)Y(0.441)PPALGS(0.003)PGALAGAGVGAAGPLER;HS(1)YPPALGSPGALAGAGVGAAGPLER;HS(0.995)Y(0.005)PPALGSPGALAGAGVGAAGPLER 167.62 3.09E-17 84681000 121842 112375 116274 125311 134237 114381 154967 104620 107035 94108 TRUE FALSE 131170.3172 106794.6209 120150.5171 115072.6904 128966.1809 118733.8491 134619.6468 118294.1932 116344.7108 91037.26367 1.440842046 1.173086894 1.319794909 1.264017456 1.416630682 1.304233501 1.478731251 1.299404095 1.277989981 1 16.47416957 -8.830796567 2.012933053 1.000190913 1.334545082 0.584784484 0.084904794 1.046472277 5.885410942 0.080264032 0.022177656 1.48E-09 8.830796567 0.334354169 HSADGIPPT(ph)VLRSPVGLSSDGISSSSSSSR ddPTM_A459_MK2206_30min_R1 1 HSADGIPPTVLRSPVGLSSDGISSSSSSSR 30 1 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 HS(0.018)ADGIPPT(0.619)VLRS(0.279)PVGLS(0.037)S(0.037)DGIS(0.004)S(0.004)S(0.001)SSSSR 46.847 0.018681 1894100 475.69 333.9 392.77 505.43 492.55 466.66 510.4 405.49 463.46 236.55 TRUE FALSE 435.2300676 312.1630493 366.1098667 544.3583062 472.9306905 493.0818859 476.3521473 401.9448437 511.6383255 265.8555999 1.637091969 1.174182712 1.377100452 2.047571337 1.778900617 1.854698138 1.791770222 1.511891583 1.92449708 1 8.054499045 -3.389851822 9.503957488 1.634145205 45.48472379 0 0.323171939 0 0 0.074152387 0 0.000407519 3.389851822 43.85057858 HSAGS(ph)GAEESNSSSTVQK ddPTM_A459_MK2206_30min_R1 3 HSAGSGAEESNSSSTVQK 18 0 Q8IYL3 Q8IYL3 C1orf174 UPF0688 protein C1orf174 1 HS(0.177)AGS(0.823)GAEESNSSSTVQK;HS(0.005)AGS(0.995)GAEESNSSSTVQK;HS(0.199)AGS(0.801)GAEESNSSSTVQK 187.57 1.31E-10 16422800 11084.2 8867.13 10039.36 8929.24 11591.2 10638.29 11125.44 11045.96 8529.92 8063.73 TRUE FALSE 10141.43058 8289.878225 9357.916214 9616.971612 11129.49796 11240.62079 10383.2822 10949.38634 9416.635709 9062.72575 1.119026534 0.914722397 1.032571929 1.061156641 1.228051942 1.240313466 1.145712944 1.208178051 1.039051161 1 13.14572931 -6.050944047 4.588787332 1.15880259 1.015264905 0.281566668 0.086573852 0.225865506 10.22125758 0.025006274 0.033905014 8.89E-07 6.050944047 -0.143537685 HSAGS(ph)GAEESNSSSTVQK ddPTM_A459_MK2206_30min_R2 1 HSAGSGAEESNSSSTVQK 18 0 Q8IYL3 Q8IYL3 C1orf174 UPF0688 protein C1orf174 1 HS(0.191)AGS(0.808)GAEES(0.001)NSSSTVQK 79.942 0.0077246 7073700 7841.1 11445 10469 12850 15120 11499 14164 9966.2 12840 9246.1 TRUE FALSE 8441.420645 10876.65794 10818.03123 11800.11389 14526.31283 11936.6025 12304.24979 11268.81656 13956.79999 8944.400514 0.94376595 1.216029842 1.209475271 1.319273872 1.624067796 1.334533542 1.375637167 1.259873878 1.56039524 1 13.12676908 -4.620375285 1.041930782 1.370369586 0.636397953 0.35284207 0.163170034 2.504163919 1.775984752 0.050224817 2.215791783 2.40E-05 4.620375285 -0.733971632 HSAIS(ph)PK ddPTM_A459_MK2206_30min_R2 2 HSAISPK 7 0 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 HSAIS(1)PK;HSAIS(1)PK 78.264 0.032378 33850000 267832 143938 196678 131111 211494 112977 200241 474230 295687 246080 TRUE FALSE 288337.4238 136790.2482 203235.1464 120398.8119 203189.6829 117276.4189 173949.1162 536213.4893 321405.3208 238050.4298 1.21124513 0.574627185 0.853748286 0.505770193 0.853557303 0.492653674 0.730723806 2.252520568 1.35015644 1 17.86090771 -7.727064592 24.53868857 1.601003582 0.728742932 0.509339133 0.352395811 96.08520946 68591.06506 0.15416207 0.088999191 1.87E-08 7.727064592 -0.87226065 HSAS(ph)PVVFTSAR ddPTM_A459_MK2206_30min_R1 1 HSASPVVFTSAR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 HS(0.157)AS(0.843)PVVFTSAR 131.79 0.0019749 6565600 1693.5 1740.2 1926.7 1551.9 1826 1675.4 1670.5 1906.4 1690.2 1490.6 TRUE FALSE 1549.458932 1626.912664 1795.920972 1671.427607 1753.266553 1770.2597 1559.063993 1889.732546 1865.902338 1675.266781 0.924902797 0.971136467 1.072020882 0.99770832 1.046559612 1.056703159 0.930636249 1.128018872 1.113794149 1 10.71017514 -5.057072477 3.733985382 1.042548089 0.930809321 0.339059005 0.054757866 0.254749589 6.959664452 0.014440276 0.051830634 8.77E-06 5.057072477 -0.111738768 HSAS(ph)PVVFTSAR ddPTM_A459_MK2206_30min_R2 2 HSASPVVFTSAR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 HS(0.01)AS(0.99)PVVFTSAR;HS(0.018)AS(0.982)PVVFTSAR 107.13 0.0056962 19131400 62667 91354 74387 92371 88085 82319 90584 80387 79173 80577 TRUE FALSE 67464.8337 86817.4932 76867.02545 84823.99382 84626.34031 85451.70723 78690.21199 90893.85691 86059.32443 77947.77909 0.865513226 1.113790466 0.986134901 1.088215659 1.085679942 1.096268659 1.009524747 1.166086551 1.104063842 1 16.2502203 -4.754807979 24.98927214 1.074412652 0.865512871 0.568313306 0.054009004 161.6523963 609103.0489 0.0130763 0.122819063 1.76E-05 4.754807979 -0.208899782 HSCSGS(ph)SPPR ddPTM_A459_MK2206_30min_R2 1 HSCSGSSPPR 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HSCSGS(0.5)S(0.5)PPR 71.153 0.04758 45813000 0 0 0 0 0 0 0 0 441.46 0 TRUE FALSE 0 0 0 0 0 0 0 0 479.8573928 0 0 HSCSGSS(ph)PPR ddPTM_A459_MK2206_30min_R1 2 HSCSGSSPPR 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HS(0.002)CS(0.004)GS(0.031)S(0.963)PPR;HS(0.001)CS(0.019)GS(0.153)S(0.827)PPR 90.149 0.029843 1481850 1369.03 1132.03 774.52 1320.63 420.21 494.6 1067.66 1526.32 146.66 842.25 TRUE FALSE 1252.586809 1058.334641 721.9477403 1422.345151 403.4721459 522.6038246 996.4383495 1512.975545 161.9058318 946.5942887 1.323256251 1.118044609 0.762679164 1.502592154 0.426235559 0.552088504 1.052656203 1.598335806 0.171040364 1 9.886602407 -3.83592251 0.765750587 0.881255479 2.824926914 0.10273562 0.421582649 25.50245631 3.893886652 0.157605007 59.53059904 0.000145907 3.83592251 1.943671435 HSCSGSS(ph)PPR ddPTM_A459_MK2206_30min_R2 2 HSCSGSSPPR 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HS(0.002)CS(0.002)GS(0.119)S(0.877)PPR;HSCS(0.001)GS(0.025)S(0.974)PPR 117.14 0.0061178 621560000 96875 83755 82087 103520 128232 87795 112587 191168 161783 80180 TRUE FALSE 104291.8245 79595.84849 84823.73961 95062.08486 123196.9674 91136.10025 97804.19166 216154.314 175854.5929 77563.73317 1.344595215 1.026199298 1.093600529 1.225599658 1.588332102 1.174983417 1.260952608 2.786796163 2.267227037 1 16.24309462 -7.696252658 12.55793242 2.144914506 1.239964675 0.383235948 0.440688039 0.661866906 125.9659256 0.197358849 0.113879049 2.01E-08 7.696252658 -0.904949831 HSCSPMGDGDPEAMEES(ph)PR ddPTM_A459_MK2206_30min_R1 2 HSCSPMGDGDPEAMEESPR 19 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 HSCSPMGDGDPEAMEES(1)PR;HS(0.001)CS(0.282)PMGDGDPEAMEES(0.718)PR 141.91 2.91E-05 6590900 2525.5 2530.1 2693.5 2318.3 2663.5 2554.4 2859.9 2389.9 2183.25 2284.8 TRUE FALSE 2310.692963 2365.39003 2510.672725 2496.855868 2557.407155 2699.027921 2669.121289 2369.005356 2410.20665 2567.858273 0.899852218 0.921152875 0.977730255 0.972349562 0.995930025 1.051081342 1.039434815 0.92256079 0.938605793 1 11.32634986 -5.186520781 1.637995781 0.991068917 0.892276732 0.413792502 0.037148143 0.573472289 2.447567798 0.012200313 0.069912561 6.51E-06 5.186520781 -0.098792185 HSCSPMGDGDPEAMEES(ph)PR ddPTM_A459_MK2206_30min_R2 7 HSCSPMGDGDPEAMEESPR 19 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 HSCSPMGDGDPEAMEES(1)PR;HSCS(0.002)PMGDGDPEAMEES(0.998)PR;HSCSPMGDGDPEAMEES(1)PR;HSCSPMGDGDPEAMEES(1)PR;HSCSPMGDGDPEAMEES(1)PR;HSCSPMGDGDPEAMEES(1)PR;HSCSPMGDGDPEAMEES(1)PR 173.01 1.16E-09 76225300 116113.8 141796 130204 176574 166449 153428 155271 119528 130977 109031 TRUE FALSE 125003.5618 134754.6168 134544.9364 162147.3394 159913.3759 159266.8101 134883.7312 135150.72 142369.1427 105473.3274 1.185167519 1.277617955 1.27562996 1.537330275 1.516149911 1.510019774 1.278842097 1.281373437 1.349811808 1 16.68651868 -9.280498838 0.83193106 0.995845381 1.373923206 0.460452403 0.116191899 3.245505834 2.771396507 0.165724122 0.043336675 5.24E-10 9.280498838 0.378077825 HSDPTLPGTDSLPCS(ph)PPVSNSYTQADPMAPR ddPTM_A459_MK2206_30min_R1 1 HSDPTLPGTDSLPCSPPVSNSYTQADPMAPR 31 0 A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4 A0A0A0MTL6 FAM65A Protein FAM65A 1 HSDPTLPGTDS(0.002)LPCS(0.997)PPVS(0.001)NSYTQADPMAPR 101.75 1.10E-08 4142400 370.25 264.51 355 345.02 263.46 296.37 495.9 319.38 609.69 551.4 TRUE FALSE 338.7582932 247.2903509 330.9035891 371.5935002 252.9658303 313.1502133 462.8194158 316.5876943 673.0694573 619.7115949 0.546638624 0.399041026 0.53396385 0.599623282 0.408199286 0.505316047 0.746830331 0.510862951 1.08610112 1 9.275453151 -8.259914358 24.99214935 1.043050613 0.53147999 0.825114229 0.094238939 51.21645497 839377.4684 0.07475152 0.024766727 5.50E-09 8.259914358 -0.511570623 HSDSGTSEASLS(ph)PPSS(ph)PPSRPR ddPTM_A459_MK2206_30min_R2 1 HSDSGTSEASLSPPSSPPSRPR 22 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 2 HSDS(0.001)GT(0.001)S(0.001)EAS(0.009)LS(0.982)PPS(0.117)S(0.863)PPS(0.025)RPR 66.556 0.012411 8616900 8630.3 12630 11538 14662 14873 12492 14901 12199 11259 11366 TRUE FALSE 9291.042404 12002.81257 11922.67116 13464.0677 14289.01129 12967.39181 12944.4808 13793.45119 12238.28747 10995.12835 0.845014456 1.091648245 1.084359435 1.224548479 1.299576579 1.17937612 1.177292378 1.2545057 1.113064539 1 13.42457683 -4.335362482 1.143831022 1.189338658 0.289502826 0.581469609 0.081764429 2.547844788 1.398790054 0.024014983 3.519389472 4.62E-05 4.335362482 -0.899835832 HSEEAEFTPPLKCS(ph)PK ddPTM_A459_MK2206_30min_R1 2 HSEEAEFTPPLKCSPK 16 1 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 HS(0.001)EEAEFT(0.072)PPLKCS(0.927)PK;HSEEAEFTPPLKCS(1)PK 86.699 0.0065555 21180000 9590.1 11630.3 11651.5 10406.5 9139.1 7890.6 8994.2 9254.4 9774.7 9205.4 TRUE FALSE 8774.411635 10873.16536 10860.62864 11208.01043 8775.070295 8337.358953 8394.213329 9173.489756 10790.81504 10345.83445 0.848110578 1.05097036 1.049758596 1.083335567 0.848174242 0.805866264 0.811361652 0.886684375 1.043010605 1 13.33676239 -6.270488316 24.95299375 0.884460183 1.014089591 0.238258165 0.092901139 816.6987785 2252092.512 0.02955219 0.034020998 5.36E-07 6.270488316 0.129629408 HSEEAEFTPPLKCS(ph)PK ddPTM_A459_MK2206_30min_R2 3 HSEEAEFTPPLKCSPK 16 1 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 HSEEAEFTPPLKCS(1)PK;HSEEAEFT(0.055)PPLKCS(0.945)PK;HSEEAEFTPPLKCS(1)PK 94.856 0.0049537 51705000 122217 128668 136673 124385 133021 89843 184512 137508 110095 167282 TRUE FALSE 131574.0275 122278.5342 141229.6096 114222.3476 127797.9272 93262.03832 160285.3528 155480.7677 119670.8641 161823.602 0.813070688 0.755628553 0.872738017 0.705844797 0.789736018 0.576319135 0.990494284 0.960804022 0.739514277 1 17.30406252 -7.290226796 24.99058177 0.919436816 0.757452636 0.413787328 0.099259931 771.6222373 669848.0134 0.040890997 0.027573865 5.13E-08 7.290226796 -0.16198418 HSEEMICR ddPTM_A459_MK2206_30min_R1 1 HSEEMICR 8 0 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 0 113.41 0.010428 0 1951.6 1766.8 1696.2 1612.1 2169.6 1894.4 2366.8 1728.5 1819.4 1961.1 FALSE TRUE 1785.606172 1651.780999 1581.06667 1736.264221 2083.180238 2001.659291 2208.91509 1713.387907 2008.533141 2204.055874 0.810145602 0.749427915 0.717344188 0.787758714 0.945157635 0.908170848 1.00220467 0.777379524 0.911289575 1 11.10594508 -6.166836986 4.722023075 0.915828723 0.757691859 0.602778178 0.062749014 0.163762067 6.104579882 0.018877306 0.024632529 6.81E-07 6.166836986 -0.158136864 HSESPPS(ph)TLNAQMLNGMIK ddPTM_A459_MK2206_30min_R2 1 HSESPPSTLNAQMLNGMIK 19 0 Q9Y2G1-2;Q9Y2G1 Q9Y2G1-2 MYRF "Myelin regulatory factor;Myelin regulatory factor, N-terminal;Myelin regulatory factor, C-terminal" 1 HS(0.037)ES(0.259)PPS(0.352)T(0.352)LNAQMLNGMIK 147.49 2.71E-05 3914000 30012 35307 26662 33798 27291 28936 38114 26516 25681 30927 TRUE FALSE 32309.7418 33553.70572 27550.89777 31036.59529 26219.41821 30037.17976 33109.58602 29981.73224 27914.68696 29917.85452 1.079948489 1.121527805 0.92088481 1.03739375 0.876380296 1.003988429 1.106683168 1.002135104 0.933044411 1 14.8687191 -5.245990954 24.67825496 0.988146808 1.100738166 0.359667364 0.061627824 782.593409 1250156.074 0.016102646 0.042254304 5.68E-06 5.245990954 0.112591358 HSGNITFDEIVNIAR ddPTM_A459_MK2206_30min_R1 1 HSGNITFDEIVNIAR 15 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 0 144.4 0.00052473 15322000 2620.7 3004.9 2529.7 2634 2918.9 2776.1 2934.2 2765.9 1871.7 2403.3 FALSE TRUE 2397.795703 2809.280464 2357.991012 2836.871136 2802.634032 2933.280383 2738.464872 2741.718028 2066.269913 2701.038948 0.887730888 1.04007403 0.87299408 1.050288867 1.037613335 1.085982261 1.013856121 1.015060531 0.764990788 1 11.39929873 -5.776201056 24.9993525 1.002328653 0.944247069 0.079850688 0.091992759 653.8855119 1107373.686 0.026138197 0.038948138 1.67E-06 5.776201056 -0.058081585 HSGPNS(ph)ADSANDGFVR ddPTM_A459_MK2206_30min_R1 2 HSGPNSADSANDGFVR 16 0 P52597 P52597 HNRNPF "Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed" 1 HSGPNS(0.995)ADS(0.005)ANDGFVR;HSGPNS(0.993)ADS(0.007)ANDGFVR 225.17 1.28E-11 17448400 2478 2483.23 2122.26 1987.34 2461.1 2151.06 2534.89 2115.79 1435.4 1814.4 TRUE FALSE 2267.233088 2321.571276 1978.206904 2140.405271 2363.069176 2272.851158 2365.792113 2097.291871 1584.614967 2039.18157 1.111834827 1.138481884 0.970098462 1.049639376 1.158832156 1.114589888 1.160167465 1.028496874 0.777083802 1 10.99377452 -8.044940864 6.74011961 0.890853955 1.097712484 0.569093014 0.072987569 0.165214383 19.41229613 0.048688941 0.01864964 9.02E-09 8.044940864 0.206858529 HSGPNS(ph)ADSANDGFVR ddPTM_A459_MK2206_30min_R2 2 HSGPNSADSANDGFVR 16 0 P52597 P52597 HNRNPF "Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed" 1 HSGPNS(0.972)ADS(0.028)ANDGFVR;HSGPNS(0.996)ADS(0.004)ANDGFVR 174.87 2.16E-06 10479300 22019.1 30210.2 28661.6 38983 34577 35398 36639 28653.6 34267 19332.5 TRUE FALSE 23704.89923 28710.0054 29617.16344 35797.9642 33219.33324 36745.09569 31828.25529 32398.7239 37247.48172 18701.68211 1.267527653 1.535156315 1.583663077 1.914157453 1.776275153 1.964801641 1.701892648 1.732396247 1.991664787 1 14.19088042 -4.978003003 1.481396935 1.763206175 1.192468281 0.195375138 0.268700316 1.079187346 2.897847084 0.072288922 0.818756792 1.05E-05 4.978003003 -0.570737894 HSGPNSADSANDGFVR ddPTM_A459_MK2206_30min_R1 4 HSGPNSADSANDGFVR 16 0 P52597 P52597 HNRNPF "Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed" 0 ;;; 140.46 0.00056126 26338000 9971.2 8207.9 8827.3 7297.2 10933 9747.9 10187.7 9623 6972.7 6734.6 FALSE TRUE 9123.097079 7673.564218 8228.12747 7859.231608 10497.51546 10299.81767 9508.097122 9538.867126 7697.537117 7568.933092 1.205334618 1.013823762 1.087092113 1.038353955 1.386921424 1.360801787 1.256200445 1.260265748 1.016991037 1 12.88587424 -4.438740962 22.21601432 1.172651324 3.623801689 0.000267029 0.141629791 5843.362111 1653640.176 0.036738958 51884.35051 3.64E-05 4.438740962 2.451150365 HSGPNSADSANDGFVR ddPTM_A459_MK2206_30min_R2 1 HSGPNSADSANDGFVR 16 0 P52597 P52597 HNRNPF "Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed" 0 96.773 0.023244 0 21004 32582 20066 30998 31718 35735 29520 25587 28379 23922 FALSE TRUE 22612.08239 30964.02526 20734.99042 28465.36424 30472.59195 37094.92047 25643.98854 28931.30875 30847.35412 23141.4271 0.977125667 1.338034389 0.896011743 1.230060883 1.316798304 1.602965984 1.108142053 1.250195532 1.332992732 1 14.49819022 -4.747359179 24.76442551 1.238430599 0.977124921 0.140882345 0.186861949 1345.405517 2366162.975 0.047056135 0.954199115 1.79E-05 4.747359179 -0.261305678 HSHS(ph)HSPMSTR ddPTM_A459_MK2206_30min_R2 1 HSHSHSPMSTR 11 0 P62995 P62995 TRA2B Transformer-2 protein homolog beta 1 HS(0.044)HS(0.797)HS(0.141)PMS(0.007)T(0.011)R 70.68 0.034183 3251700 0 2345 773.02 3296.6 3826 3661.4 2222.5 2189.9 3125.7 4920.4 TRUE FALSE 0 2228.55071 798.792101 3027.257235 3675.772016 3800.737143 1930.68308 2476.127449 3397.567736 4759.847751 0 0.468197898 0.167818834 0.635998753 0.772245712 0.79849973 0.405618663 0.520211481 0.713797565 1 12.21669971 -5.787875929 8.51432328 0.668815541 0.237568788 0.58040347 0.186036169 0.168658951 47.62874383 0.051885279 0.0786073 1.63E-06 5.787875929 -0.431246753 HSLDS(ph)DEEEDDDDGGSSK ddPTM_A459_MK2206_30min_R2 2 HSLDSDEEEDDDDGGSSK 18 0 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 HS(0.011)LDS(0.989)DEEEDDDDGGSSK;HS(0.016)LDS(0.984)DEEEDDDDGGSSK 203.93 6.98E-11 29531000 181760 151893 155804 164074 136512 103375 201013 120881 93253 152109 TRUE FALSE 195675.6853 144350.2145 160998.4276 150668.6294 131151.853 107309.0081 174619.7516 136680.5617 101363.9774 147145.6958 1.3298091 0.98100195 1.094142963 1.023941805 0.891306078 0.729270452 1.186713282 0.928879102 0.68886811 1 17.16688582 -1.522878747 0.614150377 0.912781439 27.13894136 0.409337685 0.141351696 195.7790317 1.442720614 0.063325641 6918.212153 0.03 1.522878747 26.22615992 HSLEEDEGSDFITENR ddPTM_A459_MK2206_30min_R2 1 HSLEEDEGSDFITENR 16 0 Q9NUQ3 Q9NUQ3 TXLNG Gamma-taxilin 0 161.82 6.17E-05 1211800 5537.8 8178.4 6266.2 7915.7 6063.6 6982.9 8761.6 5357.3 6135.2 5617.1 FALSE TRUE 5961.778226 7772.272549 6475.111981 7268.961989 5825.512597 7248.639153 7611.191395 6057.517504 6668.828606 5433.814487 1.097162636 1.430352944 1.191632875 1.337727301 1.072085293 1.333987233 1.400708731 1.114781802 1.227283085 1 12.4077496 -8.83880395 1.091152889 1.001655792 1.261254806 0.275315249 0.12070535 1.365169975 2.85037091 0.110479702 0.034717145 1.45E-09 8.83880395 0.259599014 HSLLLSSS(ph)PNR ddPTM_A459_MK2206_30min_R2 1 HSLLLSSSPNR 11 0 G1UD79;Q7Z309-4;Q7Z309-3 G1UD79 SPACIA2;FAM122B Protein FAM122B 1 HSLLLS(0.09)S(0.215)S(0.695)PNR 106.55 0.0073134 2895800 18952 20804 18725 23898 20488 19992 24934 19432 17899 21614 TRUE FALSE 20402.97969 19770.90361 19349.28215 21945.45695 19683.53818 20752.80957 21660.13585 21971.82912 19455.82267 20908.73695 0.9758112 0.945580963 0.925416117 1.0495831 0.941402545 0.992542477 1.035937077 1.050844399 0.930511619 1 14.35181829 -5.743012697 24.9999764 1.000966268 0.94860058 0.256316851 0.039931235 337.5144302 457911.2942 0.010790338 0.018643398 1.81E-06 5.743012697 -0.052365688 HSLS(ph)GSSPGMK ddPTM_A459_MK2206_30min_R2 1 HSLSGSSPGMK 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HSLS(0.333)GS(0.333)S(0.333)PGMK 120.86 0.0046096 27954000 28879 32363 31783 33411 37463 30118 43744 32750 27432 23681 TRUE FALSE 31089.99844 30755.90048 32842.62936 30681.21442 35992.01438 31264.16159 38000.36025 37030.53745 29817.98577 22908.29091 1.357150499 1.342566349 1.433656901 1.339306129 1.571134858 1.364753124 1.658803811 1.616468797 1.301624198 1 14.48358221 -6.207169284 24.99716369 1.458919483 1.371018756 0 0.180973798 1075.672021 495460.342 0.050941833 0.06576554 6.21E-07 6.207169284 -0.087900727 HSLS(ph)LDDIR ddPTM_A459_MK2206_30min_R1 2 HSLSLDDIR 9 0 Q96NE9-2;Q96NE9;Q96NE9-3 Q96NE9-2 FRMD6 FERM domain-containing protein 6 1 HS(0.434)LS(0.566)LDDIR;HS(0.146)LS(0.854)LDDIR 85.845 0.026101 0 880.45 649.86 522.61 792.02 815.5 690.09 838.96 598.97 685.12 686.34 TRUE FALSE 805.5631041 607.5539959 487.1366893 853.0215176 783.0169082 729.1622994 782.9945092 593.7332684 756.3406757 771.3689808 1.04432914 0.787630837 0.631522269 1.105854058 1.015100332 0.945283409 1.015071294 0.769713695 0.980517359 1 9.591277322 -5.773113647 24.99991368 0.968324518 0.817807708 0.247833333 0.123021036 318.8034554 682703.0467 0.035584058 0.05327643 1.69E-06 5.773113647 -0.15051681 HSLS(ph)LDDIR ddPTM_A459_MK2206_30min_R2 3 HSLSLDDIR 9 0 Q96NE9-2;Q96NE9;Q96NE9-3 Q96NE9-2 FRMD6 FERM domain-containing protein 6 1 HS(0.057)LS(0.943)LDDIR;HSLS(1)LDDIR;HS(0.001)LS(0.999)LDDIR 153.1 0.0010364 19162800 70950.7 95104.2 85382.5 100243.8 84918.6 95005 80887.5 64573.1 82138.1 57915.7 TRUE FALSE 76382.74014 90381.46372 88229.10994 92053.56088 81584.26908 98620.48185 70266.87409 73013.02588 89282.32347 56025.91545 1.363346579 1.613208155 1.574791045 1.643053222 1.456188059 1.760265425 1.254185202 1.303200944 1.59358973 1 15.7738067 -10.29507357 0.320410265 0.775081312 1.570468519 0.503911178 0.152032157 9.384553018 0.877561144 2.223824641 0.150728603 5.07E-11 10.29507357 0.795387207 HSLS(ph)PVPWEEDSFLQVK ddPTM_A459_MK2206_30min_R1 1 HSLSPVPWEEDSFLQVK 17 0 P10073 P10073 ZSCAN22 Zinc finger and SCAN domain-containing protein 22 1 HS(0.333)LS(0.667)PVPWEEDSFLQVK 80.411 0.010989 4292500 1568.7 2197.3 2179.5 1801.3 1826.1 1603.5 1794.6 1972.8 1980.3 1795.5 TRUE FALSE 1435.273827 2054.255371 2031.561612 1940.036438 1753.36257 1694.288784 1674.885508 1955.552018 2186.159272 2017.940095 0.711256905 1.017996211 1.006750209 0.961394465 0.868887324 0.839613023 0.829997636 0.969083286 1.083361829 1 10.97866763 -8.000622153 7.077262724 1.037328562 0.899878615 0.319943716 0.088167518 0.165581481 51.22208 0.054745269 0.02389232 9.99E-09 8.000622153 -0.137449947 HSLSGS(ph)SPGMK ddPTM_A459_MK2206_30min_R1 6 HSLSGSSPGMK 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HSLS(0.299)GS(0.616)S(0.085)PGMK;HSLS(0.033)GS(0.841)S(0.126)PGMK;HSLS(0.232)GS(0.384)S(0.384)PGMK;HSLS(0.02)GS(0.49)S(0.49)PGMK;HSLS(0.02)GS(0.49)S(0.49)PGMK;HSLS(0.004)GS(0.498)S(0.498)PGMK 211.63 1.93E-05 111619500 44453.1 37974.8 41808 32073.1 40716.8 39254.4 42364.9 38981.5 33125.7 32688.6 TRUE FALSE 40672.13041 35502.63362 38970.18944 34543.37572 39094.96364 41476.95021 39538.81482 38640.68886 36569.23506 36738.31055 1.107076776 0.966365439 1.060750722 0.940254878 1.064147018 1.128983603 1.076228444 1.051781867 0.995397842 1 15.16499766 -4.418012617 14.23249561 1.036684109 3.295025639 0.144727802 0.053793959 194849.8059 361133.4215 0.013942099 13780435.98 3.82E-05 4.418012617 2.258341529 HSLSGS(ph)SPGMK ddPTM_A459_MK2206_30min_R2 5 HSLSGSSPGMK 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HSLS(0.003)GS(0.498)S(0.498)PGMK;HSLS(0.004)GS(0.498)S(0.498)PGMK;HSLS(0.001)GS(0.499)S(0.499)PGMK;HSLS(0.001)GS(0.5)S(0.5)PGMK;HSLS(0.001)GS(0.5)S(0.5)PGMK 181.31 4.28E-05 100555800 268589 398470 337317 395933 399227 308012 449710 314777 300407 247665 TRUE FALSE 289152.3803 378682.5592 348562.9804 363584.0074 383551.342 319733.6125 390662.5368 355919.4347 326535.8578 239583.7113 1.206894988 1.58058558 1.454869275 1.517565636 1.600907424 1.33453819 1.630588885 1.485574427 1.362930126 1 17.8701703 -8.69849311 2.550012522 1.000269598 1.484471905 0.583402376 0.120787171 0.479496407 5.577043571 0.109374557 0.029486585 2.00E-09 8.69849311 0.484202307 HSLSGSS(ph)PGMK ddPTM_A459_MK2206_30min_R1 1 HSLSGSSPGMK 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HSLS(0.001)GS(0.342)S(0.657)PGMK 196.11 2.05E-05 13368000 6533.8 6011.8 6066.4 5047.4 6003.8 6421.4 6736.7 5729.1 5082.4 4834.8 TRUE FALSE 5978.066 5620.430727 5654.62967 5436.151623 5764.655933 6784.974119 6287.307035 5679.011083 5610.733668 5433.771525 1.100168819 1.034351684 1.04064546 1.000438019 1.06089406 1.248667539 1.157079757 1.045132475 1.032567093 1 12.40773819 -3.86030226 15.61997595 1.076305587 1.099872968 0 0.073847885 0 0 0.018420929 0 0.000137942 3.86030226 0.023567382 HSLSIPPVSS(ph)PPEQK ddPTM_A459_MK2206_30min_R2 2 HSLSIPPVSSPPEQK 15 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 HSLSIPPVS(0.214)S(0.786)PPEQK;HSLSIPPVS(0.063)S(0.937)PPEQK 107.62 0.0027738 15960200 129420 135411 116846 159556 156465 120272 168594 141985 140368 140036 TRUE FALSE 139328.4947 128686.6866 120741.5873 146519.7644 150321.3979 124849.0352 146457.4053 160542.927 152576.9549 135466.6368 1.028507816 0.949951144 0.891301284 1.081592988 1.109656233 0.921622019 1.081132659 1.185110451 1.12630651 1 17.04757806 -6.533367186 0.738709755 1.104111463 0.964176855 0.225663362 0.080015607 0.994848277 1.209137332 0.055461135 0.070820786 2.93E-07 6.533367186 -0.139934608 HSLYTAELIT(ph)VPFDSESPIR ddPTM_A459_MK2206_30min_R1 1 HSLYTAELITVPFDSESPIR 20 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 HSLYTAELIT(0.951)VPFDS(0.041)ES(0.008)PIR 123.55 0.00032223 6629900 1824.4 1783.5 1899.2 1635.2 1849.9 1697 1668.6 1937.2 1279.7 1116.7 TRUE FALSE 1669.2252 1667.393826 1770.287595 1761.143387 1776.214566 1793.082673 1557.290739 1920.263265 1412.729394 1255.045227 1.33001199 1.328552781 1.410536894 1.403250935 1.415259409 1.428699648 1.240824399 1.530035113 1.125640227 1 10.29352364 -8.456228261 5.003482327 1.001491222 1.382049316 0.768208672 0.072494784 0.080304154 3.688133218 0.066011124 0.017179782 3.50E-09 8.456228261 0.380558094 HSPAPPPDPGFPAPS(ph)PPPADSPSEGFSLK ddPTM_A459_MK2206_30min_R1 3 HSPAPPPDPGFPAPSPPPADSPSEGFSLK 29 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 HSPAPPPDPGFPAPS(1)PPPADSPSEGFSLK;HSPAPPPDPGFPAPS(1)PPPADSPSEGFSLK;HSPAPPPDPGFPAPS(1)PPPADSPSEGFSLK 111.55 1.06E-08 0 1977.78 2041.69 2270.88 1704.34 1944.75 1699.37 1902.9 1537.95 1419.11 1596.7 TRUE FALSE 1809.559425 1908.77561 2116.738993 1835.608562 1867.286489 1795.586861 1775.961013 1524.503865 1566.631563 1794.51125 1.008385668 1.063674362 1.179562955 1.022901674 1.040554351 1.000599389 0.989662791 0.84953709 0.873012951 1 10.80937525 -7.169175437 1.312411381 0.900353338 1.072057579 0.547382965 0.059161906 0.319258742 1.088117237 0.035931179 0.022535 6.77E-08 7.169175437 0.171704241 HSPAPPPDPGFPAPS(ph)PPPADSPSEGFSLK ddPTM_A459_MK2206_30min_R2 4 HSPAPPPDPGFPAPSPPPADSPSEGFSLK 29 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 HSPAPPPDPGFPAPS(1)PPPADSPSEGFSLK;HSPAPPPDPGFPAPS(0.897)PPPADS(0.042)PS(0.041)EGFS(0.02)LK;HS(0.001)PAPPPDPGFPAPS(0.998)PPPADS(0.001)PSEGFSLK;HSPAPPPDPGFPAPS(1)PPPADSPSEGFSLK 130.57 6.84E-14 13996000 57463.8 75489 62566.1 66732.4 52920.5 52478 57250.7 49268 45449.7 40375.3 TRUE FALSE 61863.27271 71740.32603 64652.02255 61280.14945 50842.57527 54475.08706 49733.61432 55707.49676 49402.83275 39057.85727 1.583888033 1.836770654 1.655288515 1.568958303 1.301724642 1.394727998 1.273331867 1.426281436 1.264862852 1 15.25332518 -1.522878975 0.101812767 0.763561095 3.73977833 0.790469984 0.103740747 55.46878979 0.400699707 1.302513455 23.07320355 0.029999984 1.522878975 2.976217235 HSPIAPS(ph)SPSPQVLAQK ddPTM_A459_MK2206_30min_R2 2 HSPIAPSSPSPQVLAQK 17 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 HSPIAPS(0.572)S(0.427)PS(0.001)PQVLAQK;HS(0.038)PIAPS(0.642)S(0.203)PS(0.117)PQVLAQK 137.69 0.0003379 16857800 187690 202665 180240 184075 201903 168384 219329 152368 155462 179177 TRUE FALSE 202059.6907 192600.9508 186249.1116 169035.4837 193975.2737 174791.9711 190530.8388 172283.0208 168983.8037 173330.4692 1.165748248 1.111177693 1.074531861 0.975220828 1.11910661 1.008431881 1.099234542 0.993956929 0.97492267 1 17.40316576 -1.522878745 0.414395804 1.015284708 3.71799418 0.504431712 0.046424064 66.91308894 0.866228835 0.032126786 149.2941611 0.03 1.522878745 2.702709472 HSPIAPSS(ph)PSPQVLAQK ddPTM_A459_MK2206_30min_R1 1 HSPIAPSSPSPQVLAQK 17 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 HS(0.054)PIAPS(0.272)S(0.662)PS(0.011)PQVLAQK 93.215 0.0049337 12521000 5102.1 4475.8 4258.8 3329.8 4631 4650.3 4071 4375.7 3799.8 3418 TRUE FALSE 4668.139603 4184.424606 3969.724522 3586.261773 4446.537464 4913.595967 3799.431018 4337.443716 4194.802808 3841.447645 1.215203234 1.089283258 1.033392848 0.933570389 1.157516092 1.279100074 0.989062294 1.129116968 1.091984896 1 11.90743438 -8.58150371 18.60104721 0.999999998 1.099430061 0.090501856 0.097002261 4786.465167 1518694.544 0.097014786 0.02504911 2.62E-09 8.58150371 0.099430063 HSPIAPSS(ph)PSPQVLAQK ddPTM_A459_MK2206_30min_R2 2 HSPIAPSSPSPQVLAQK 17 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 HS(0.007)PIAPS(0.404)S(0.474)PS(0.114)PQVLAQK;HS(0.005)PIAPS(0.389)S(0.445)PS(0.162)PQVLAQK 61.767 0.03639 23318600 129685 159741 146260 162369 152671 143668 169316 122807 131468 134231 TRUE FALSE 139613.7833 151808.4942 151136.2354 149102.9333 146676.3694 149135.3864 147084.6058 138858.2966 142902.849 129851.0535 1.075184063 1.169097132 1.163919979 1.148261253 1.129573966 1.148511178 1.132717848 1.069365961 1.10051359 1 16.98649819 -8.581474752 0.681139682 1.000694529 1.144331369 0.679521975 0.028396613 0.46256839 0.484451912 0.027945374 0.011069058 2.62E-09 8.581474752 0.14363684 HSPQQPSNGS(ph)LR ddPTM_A459_MK2206_30min_R1 2 HSPQQPSNGSLR 12 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 HSPQQPSNGS(1)LR;HSPQQPSNGS(1)LR 152.11 0.00050463 33790000 2522.42 2105.96 2467.34 1855.75 2124.15 2055.23 2578.09 2540.69 2083.18 2083.17 TRUE FALSE 2307.874933 1968.861621 2299.863835 1998.680187 2039.540608 2171.595347 2406.11032 2518.477015 2299.734016 2341.248827 0.98574526 0.840945054 0.98232354 0.853681234 0.871133638 0.927537185 1.027703802 1.075698143 0.982268091 1 11.19306256 -7.206228043 4.138346817 1.028393962 0.90424341 0.536272297 0.050674464 0.158872844 5.674243402 0.019593995 0.014541734 6.22E-08 7.206228043 -0.124150552 HSPQQPSNGS(ph)LR ddPTM_A459_MK2206_30min_R2 2 HSPQQPSNGSLR 12 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 HSPQQPS(0.378)NGS(0.622)LR;HSPQQPS(0.128)NGS(0.872)LR 128.95 0.0023784 121400000 29996 44765.2 37003.7 40576.5 40156.7 36969.7 42190.8 24904.3 34485.9 22022.9 TRUE FALSE 32292.51682 42542.22526 38237.38489 37261.27015 38579.94619 38376.60784 36651.09728 28159.37752 37485.42125 21304.29458 1.515774986 1.996884952 1.794820512 1.749002766 1.81089996 1.801355483 1.720361927 1.321770004 1.759524171 1 14.37885666 -9.397505645 0.401663609 0.892774635 1.815378859 0.642475564 0.165381411 2.247483206 0.529084256 0.578587465 0.112177448 4.00E-10 9.397505645 0.922604224 HSPT(ph)EDEESAK ddPTM_A459_MK2206_30min_R2 2 HSPTEDEESAK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HS(0.4)PT(0.6)EDEESAK;HS(0.25)PT(0.75)EDEESAK 113.07 0.017095 43294000 93520 59451 69400 56275 51221 33741 77092 60526 46810 64914 TRUE FALSE 100679.9631 56498.74979 71713.76136 51677.15249 49209.80618 35025.0374 66969.7278 68436.95602 50881.44919 62795.8615 1.603289782 0.899720912 1.142014134 0.822938825 0.783647282 0.557760282 1.066467219 1.089832266 0.810267555 1 15.93838186 -2.715366577 1.354190891 0.88944752 199.9917304 0.594398402 0.16986413 294.6667988 2.543376267 0.05084321 180281.4639 0.001925899 2.715366577 199.1022829 HSPTSEPTPPGDALPPVS(ph)SPHTHR ddPTM_A459_MK2206_30min_R1 4 HSPTSEPTPPGDALPPVSSPHTHR 24 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;Q9H6S3-2;A0A087WX39 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 HSPTSEPTPPGDALPPVS(0.75)S(0.181)PHT(0.069)HR;HSPTSEPTPPGDALPPVS(0.809)S(0.13)PHT(0.061)HR;HSPTSEPTPPGDALPPVS(0.58)S(0.347)PHT(0.073)HR;HSPTSEPTPPGDALPPVS(0.512)S(0.356)PHT(0.132)HR 123.83 7.76E-08 44653700 6834.79 4147.9 4356.19 2915.09 8351.02 8874.87 8808.01 6896.99 3608.23 3910.24 TRUE FALSE 6253.45522 3877.870956 4060.50396 3139.610737 8018.38119 9377.35747 8220.443724 6836.690344 3983.318421 4394.670052 1.422963532 0.882403209 0.923961051 0.714413301 1.824569557 2.133802392 1.870548557 1.555677733 0.906397607 1 12.10153914 -6.264500247 24.94695345 1.621650818 0.974113391 0.319574059 0.393402015 290.7491928 2369686.084 0.125262583 0.14814067 5.44E-07 6.264500247 -0.647537427 HSPTSEPTPPGDALPPVS(ph)SPHTHR ddPTM_A459_MK2206_30min_R2 2 HSPTSEPTPPGDALPPVSSPHTHR 24 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;Q9H6S3-2;A0A087WX39 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 HSPTSEPTPPGDALPPVS(0.907)S(0.083)PHT(0.01)HR;HSPTSEPTPPGDALPPVS(0.76)S(0.163)PHT(0.076)HR 115.83 7.87E-08 65301000 100571 192871 139309 270500 248330 258390 203586 162975 194669 128487 TRUE FALSE 108270.7931 183293.3066 143953.4925 248399.2847 238579.3164 268223.2125 176854.9136 184276.3921 211600.9577 124294.4797 0.871082878 1.474669728 1.15816481 1.998473989 1.919468322 2.157965608 1.42287022 1.482579053 1.702416376 1 16.9234027 -5.742991799 24.97285492 1.709758498 1.198641926 0.308281179 0.339275079 291.9221705 395177.6706 0.092077826 0.159106 1.81E-06 5.742991799 -0.511116572 HSQAVEELAEQLEQTK ddPTM_A459_MK2206_30min_R2 1 HSQAVEELAEQLEQTK 16 0 P35579 P35579 MYH9 Myosin-9 0 111.7 0.003619 1546400 16391 16673 17047 16449 15528 15450 18336 16487 14409 16165 FALSE TRUE 17645.90756 15845.04306 17615.33847 15105.06408 14918.2927 16037.96058 15928.46117 18641.90751 15662.26877 15637.53737 1.128432639 1.013269717 1.126477786 0.965949032 0.954005247 1.025606538 1.018604195 1.192125529 1.001581541 1 13.93272571 -10.65273319 14.85466891 1.000000445 1.046299844 0.036030817 0.073280251 0 0 0.071779104 0.01740899 2.22E-11 10.65273319 0.0462994 HSQFIGYPITLFVEK ddPTM_A459_MK2206_30min_R1 2 HSQFIGYPITLFVEK 15 0 P07900;P07900-2;G3V2J8;Q58FG0 P07900 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 ; 126.42 0.0016078 20372800 10531.6 10559.6 11090.3 10556 10711.9 9293.9 10813.2 10173.9 8083.9 8555.2 FALSE TRUE 9635.832116 9872.168121 10337.52134 11369.02495 10285.22234 9820.112586 10091.87116 10084.95066 8924.250334 9615.082764 1.002158 1.026737716 1.07513597 1.182415714 1.069696704 1.021323771 1.04958755 1.048867796 0.928151172 1 13.23108356 -8.152563776 5.490073216 0.965142471 1.062674095 0.378041661 0.049019391 0.243833838 10.05115039 0.037690057 0.013681841 7.04E-09 8.152563776 0.097531624 HSQFLGYPITLYLEK ddPTM_A459_MK2206_30min_R1 2 HSQFLGYPITLYLEK 15 0 Q58FF8 Q58FF8 HSP90AB2P Putative heat shock protein HSP 90-beta 2 0 ; 152.68 0.00031249 19380900 12352.9 11532.8 11794.5 11499.6 11528 10472.4 11437.2 10391.2 8387.3 9826.4 FALSE TRUE 11302.22099 10782.01262 10993.9222 12385.30118 11068.81535 11065.33824 10674.24526 10300.35083 9259.189849 11043.76862 1.023402552 0.976298309 0.995486467 1.121474165 1.002267951 1.001953103 0.966540103 0.932684412 0.838408533 1 13.43094495 -7.454772815 1.773814242 0.912921008 1.023302281 0.419010126 0.051502925 0.345898206 2.123328133 0.031436959 0.016529672 3.51E-08 7.454772815 0.110381273 HSQPAT(ph)PTPLQSR ddPTM_A459_MK2206_30min_R1 1 HSQPATPTPLQSR 13 0 Q9NR12-2;Q9NR12 Q9NR12-2 PDLIM7 PDZ and LIM domain protein 7 1 HSQPAT(0.99)PT(0.01)PLQSR 97.129 0.018466 14087000 3410.6 3162.1 2926.1 2263.2 2897.1 2587.1 2896.2 2482.2 2272.5 2264.4 TRUE FALSE 3120.51056 2956.246715 2727.484485 2437.512056 2781.702372 2733.579366 2702.999782 2460.498387 2508.734507 2544.930967 1.226167075 1.161621574 1.071732208 0.957791031 1.093036474 1.074127118 1.062111239 0.966823234 0.985777037 1 11.31341081 -5.206780872 2.288894239 1.025038154 1.219894272 0.714142861 0.043961963 0.193263367 1.855993849 0.012995067 0.051473533 6.21E-06 5.206780872 0.194856118 HSQPAT(ph)PTPLQSR ddPTM_A459_MK2206_30min_R2 4 HSQPATPTPLQSR 13 0 Q9NR12-2;Q9NR12 Q9NR12-2 PDLIM7 PDZ and LIM domain protein 7 1 HSQPAT(0.995)PT(0.005)PLQSR;HSQPAT(0.998)PT(0.002)PLQSR;HS(0.006)QPAT(0.982)PT(0.011)PLQSR;HSQPAT(0.989)PT(0.01)PLQSR 117.53 0.004879 39603100 111190 120052 105249 119084 123082 106706 117636 77151.4 93619 103190 TRUE FALSE 119702.7919 114090.3923 108757.9491 109354.4563 118249.1822 110766.7716 102190.2519 87235.35288 101761.8114 99822.91875 1.199151391 1.142927833 1.089508807 1.09548446 1.184589508 1.109632667 1.023715327 0.873901044 1.019423322 1 16.60708347 -7.349616636 3.039240325 0.958846265 1.13682593 0.721585656 0.048829203 0.135338159 2.42238753 0.022432918 0.014357905 4.47E-08 7.349616636 0.177979665 HSQPS(ph)PEPHS(ph)PTEPPAWGSSIVK ddPTM_A459_MK2206_30min_R2 1 HSQPSPEPHSPTEPPAWGSSIVK 23 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 2 HS(0.432)QPS(0.958)PEPHS(0.595)PT(0.015)EPPAWGSSIVK 71.864 0.007489 5295600 12970 15658 11391 15272 14496 12652 13105 11067 15281 13048 TRUE FALSE 13962.99317 14880.44649 11770.77025 14024.22875 13926.8142 13133.48073 11384.29776 12513.4949 16610.11376 12622.24483 1.106221069 1.178906501 0.932541748 1.111072471 1.103354783 1.040502771 0.901923383 0.991384264 1.315939754 1 13.62368089 -6.780135731 21.7556075 1.040159792 1.084378337 0.020845144 0.11519357 248.5117822 289167.7313 0.041308315 0.036537991 1.66E-07 6.780135731 0.044218546 HSS(ph)EDFR ddPTM_A459_MK2206_30min_R2 1 HSSEDFR 7 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 HS(0.122)S(0.878)EDFR 101.72 0.019741 13696000 115990 118090 102360 124380 105520 92097 138360 119820 94955 118300 TRUE FALSE 124870.2836 112225.8223 105772.6313 114217.7561 101376.7546 95601.81587 120193.1658 135480.8854 103214.0143 114439.8807 1.091143077 0.980653087 0.924263733 0.998059028 0.885851628 0.835388986 1.050273428 1.183860771 0.901905993 1 16.80423037 HSS(ph)ETFSSTPSATR ddPTM_A459_MK2206_30min_R1 4 HSSETFSSTPSATR 14 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 HS(0.004)S(0.995)ETFSSTPSATR;HS(0.008)S(0.978)ET(0.014)FSSTPSATR;HS(0.005)S(0.994)ET(0.001)FSSTPSATR;HS(0.04)S(0.959)ETFSSTPSATR 250.81 1.63E-27 150776500 9979 8161.3 10241 7516.5 11267.9 10457.2 11306.5 10030.9 9123.32 8584.7 TRUE FALSE 9130.233648 7629.997887 9545.869453 8095.422132 10819.07568 11049.27763 10552.26401 9943.200899 10071.72176 9648.237447 0.946311044 0.790817797 0.98938998 0.8390571 1.121352552 1.145212034 1.093698623 1.030571745 1.043892402 1 13.2360497 -6.263198481 24.99822041 1.078683227 0.891209678 0.653127306 0.064546375 94.42853677 1341901.993 0.019405379 0.023145026 5.46E-07 6.263198481 -0.187473548 HSS(ph)ETFSSTPSATR ddPTM_A459_MK2206_30min_R2 3 HSSETFSSTPSATR 14 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 HS(0.084)S(0.827)ET(0.084)FS(0.005)STPSATR;HS(0.001)S(0.867)ET(0.121)FS(0.011)STPSATR;HS(0.293)S(0.663)ET(0.044)FSSTPSATR 179.5 7.27E-05 76644000 59757 69222 51924 85214 73928 79710 78316 71735 74782 70947 TRUE FALSE 64332.04187 65784.53614 53655.12024 78251.74361 71025.21526 82743.41991 68033.01513 81111.0108 81286.40319 68632.0052 0.937347549 0.958511061 0.781779872 1.14016403 1.034870175 1.205609827 0.991272438 1.181824873 1.184380421 1 16.06659389 -5.776676382 24.97904026 1.10949764 0.89914264 0.571063213 0.084445917 156.9359981 257275.3033 0.022937758 0.034165994 1.67E-06 5.776676382 -0.210355 HSS(ph)GDPSSEGTSGSGSVSIR ddPTM_A459_MK2206_30min_R1 2 HSSGDPSSEGTSGSGSVSIR 20 0 Q9UPU7;C9JW56;Q9UPU7-2 Q9UPU7 TBC1D2B TBC1 domain family member 2B 1 HS(0.12)S(0.862)GDPS(0.017)S(0.001)EGTSGSGSVSIR;HS(0.003)S(0.983)GDPS(0.011)S(0.002)EGT(0.001)SGSGSVSIR 164.58 1.34E-07 6507500 4678.9 4473.2 4475.1 3986.7 5274 4855.3 6074.4 4387 3752.6 5078.1 TRUE FALSE 4280.934985 4181.993867 4171.34268 4293.756325 5063.925412 5130.20289 5669.187859 4348.644922 4142.696199 5707.213366 0.750091982 0.73275583 0.730889563 0.752338497 0.887285105 0.898898037 0.99333729 0.761955904 0.725870216 1 12.47857078 -6.224068449 5.850015046 0.872892968 0.739057187 0.403439663 0.081129799 0.228028761 22.42968254 0.025559786 0.032602523 5.97E-07 6.224068449 -0.133835782 HSS(ph)ISPVR ddPTM_A459_MK2206_30min_R2 1 HSSISPVR 8 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 HS(0.001)S(0.604)IS(0.395)PVR 72.243 0.042195 0 3560.4 7984.5 5114 10531 8406.8 12823 10327 7292.2 9092.6 6392.2 TRUE FALSE 3832.986961 7588.001341 5284.498208 9670.583613 8076.706791 13310.98825 8971.052495 8245.315578 9883.457912 6183.623037 0.619861033 1.227112535 0.854595789 1.563902514 1.306144754 2.152619616 1.450776097 1.333411744 1.598328011 1 12.59423666 -5.763445319 24.99764105 1.519104236 0.933181983 0.426699924 0.308923542 48.39353243 603084.8701 0.083862366 0.131765341 1.72E-06 5.763445319 -0.585922253 HSS(ph)NPPLESHVGWVMDSR ddPTM_A459_MK2206_30min_R2 3 HSSNPPLESHVGWVMDSR 18 0 Q6PKG0;Q6PKG0-3;H0YC33;H0YBR8 Q6PKG0 LARP1 La-related protein 1 1 HS(0.192)S(0.808)NPPLESHVGWVMDSR;HS(0.002)S(0.998)NPPLESHVGWVMDSR;HS(0.221)S(0.779)NPPLESHVGWVMDSR 246.42 3.81E-79 64309000 52820 60075 57786 62736 68155 57280 69876 54988 56726 46962 TRUE FALSE 56863.93981 57091.76286 59712.5564 57610.26812 65478.89225 59459.83054 60701.19726 62175.1204 61659.92494 45429.63379 1.251692674 1.25670753 1.314396605 1.268120901 1.441325558 1.308833587 1.336158631 1.368602721 1.357262205 1 15.47134606 -10.62400189 4.320478671 0.999958511 1.323630787 0.756113601 0.054956294 40968160.15 1.624469327 17245.0725 0.013936508 2.38E-11 10.62400189 0.323672276 HSS(ph)PAPAQPK ddPTM_A459_MK2206_30min_R2 1 HSSPAPAQPK 10 0 Q70CQ4;I3L4X5 Q70CQ4 USP31 Ubiquitin carboxyl-terminal hydrolase 31 1 HS(0.003)S(0.997)PAPAQPK 152.04 0.00064887 1844600 11022 11081 9595.2 10616 11463 7519.5 10812 11388 9470 8367.8 TRUE FALSE 11865.85279 10530.73365 9915.099179 9748.638841 11012.90502 7805.659842 9392.371412 12876.4507 10293.68348 8094.759371 1.465868502 1.300932266 1.224878804 1.20431484 1.360498134 0.964285593 1.160302732 1.59071445 1.271647866 1 12.98277248 -4.78156725 2.452632238 1.236295641 1.518297358 0.160800635 0.167084715 1.135444729 8.531206889 0.044919306 0.687133461 1.65E-05 4.78156725 0.282001717 HSS(ph)PHISR ddPTM_A459_MK2206_30min_R2 1 HSSPHISR 8 0 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 HS(0.155)S(0.845)PHISR 72.2 0.044049 949680 691.83 3217.8 2260.5 3297.9 4593.9 4771.9 3249.3 2552.6 4139.9 4419 TRUE FALSE 744.7970367 3058.008731 2335.863942 3028.451021 4413.520404 4953.497998 2822.663007 2886.233584 4499.981019 4274.808392 0.174229338 0.715355742 0.546425413 0.708441348 1.032448709 1.158764919 0.660301644 0.675172621 1.05267432 1 12.06164404 -4.873824028 0.831201235 0.901216201 5.06E-16 0.572776101 0.183189067 1.851395756 1.081896367 0.073430498 1.500133249 1.34E-05 4.873824028 -0.901216201 HSS(ph)PSGTVAAR ddPTM_A459_MK2206_30min_R2 2 HSSPSGTVAAR 11 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 HS(0.001)S(0.984)PS(0.005)GT(0.01)VAAR;HS(0.259)S(0.738)PS(0.002)GT(0.002)VAAR 97.452 0.019226 1492570 7100.5 9024.6 7226.3 9732.1 8228.3 8470.9 10555.4 8473.3 6428.7 7742.5 TRUE FALSE 7644.119739 8576.451487 7467.221235 8936.956299 7905.215598 8793.266035 9169.463301 9580.789403 6987.856706 7489.862859 1.020595421 1.145074569 0.996977031 1.193206934 1.05545532 1.174022302 1.224249826 1.279167534 0.932975254 1 12.87072359 -6.763580842 24.99869199 1.145916381 1.08717702 0.008327194 0.109310267 179.83243 2099273.525 0.036471083 0.033722799 1.72E-07 6.763580842 -0.058739361 HSS(ph)PTEERDEPAYPR ddPTM_A459_MK2206_30min_R1 1 HSSPTEERDEPAYPR 15 1 F5H4R1;J3KNB8;F5H538;Q9Y6R4-2;Q9Y6R4 F5H4R1 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 1 HS(0.144)S(0.855)PT(0.001)EERDEPAYPR 92.039 0.0076526 12459000 888.21 1006.4 930.85 804.73 920.75 926.97 1019.3 751.3 807.09 826.98 TRUE FALSE 812.6630753 940.8831771 867.6664955 866.710444 884.0745778 979.4542403 951.3043568 744.7314633 890.9898937 929.4325258 0.87436479 1.012320046 0.933544363 0.932515723 0.951198235 1.05381963 1.023532457 0.801275448 0.958638598 1 9.860206323 -1.537269699 24.95190546 0.953662049 0.004872403 0 0.071339917 0 0 0.016509349 0 0.029022198 1.537269699 -0.948789646 HSS(ph)TGDSADAGPPAAGSAR ddPTM_A459_MK2206_30min_R1 2 HSSTGDSADAGPPAAGSAR 19 0 F5H1N7;Q6ZU35 F5H1N7 KIAA1211 Uncharacterized protein KIAA1211 1 HSS(0.987)T(0.013)GDSADAGPPAAGSAR;HSS(1)TGDSADAGPPAAGSAR 227.63 1.69E-23 3594900 1164.73 1144.95 1399.69 732.22 1018.23 1098.16 966.19 1039.88 972.83 628.73 TRUE FALSE 1065.663597 1070.413547 1304.682943 788.6157113 977.671743 1160.33687 901.737228 1030.788439 1073.95916 706.6218191 1.508110234 1.514832288 1.846366624 1.116036457 1.383585557 1.64209035 1.276124235 1.458755463 1.519849983 1 9.464794487 -12.70685296 0.255913696 3.40E-13 1.519083726 0.367731992 0.186433912 76.04129146 1.728674182 41.221576 0.267530399 1.96E-13 12.70685296 1.519083726 HSS(ph)TGDSADAGPPAAGSAR ddPTM_A459_MK2206_30min_R2 1 HSSTGDSADAGPPAAGSAR 19 0 F5H1N7;Q6ZU35 F5H1N7 KIAA1211 Uncharacterized protein KIAA1211 1 HS(0.106)S(0.439)T(0.439)GDS(0.016)ADAGPPAAGSAR 81.379 0.0038125 4847000 7303.4 9845.5 6652.1 7970.7 7775.6 10756 8449.7 8589.7 9270.3 6894.8 TRUE FALSE 7862.553919 9356.586787 6873.877694 7319.468313 7470.290875 11165.32712 7340.24424 9712.403283 10076.61394 6669.823241 1.178824931 1.4028238 1.030593682 1.097400643 1.12001332 1.674006449 1.100515557 1.456171016 1.510776759 1 12.70343281 HSS(ph)YPAGTEDDEGMGEEPSPFR ddPTM_A459_MK2206_30min_R1 2 HSSYPAGTEDDEGMGEEPSPFR 22 0 Q92934 Q92934 BAD Bcl2-associated agonist of cell death 1 HS(0.146)S(0.853)Y(0.001)PAGTEDDEGMGEEPSPFR;HS(0.171)S(0.829)YPAGTEDDEGMGEEPSPFR 229.03 1.31E-30 20178900 3946.8 4012.2 4656.4 3584.5 4875.5 4324 5012.3 5637.3 5336.8 5228 TRUE FALSE 3611.103935 3751.005051 4340.336541 3860.578811 4681.298511 4568.821143 4677.938612 5588.01368 5891.579458 5875.684109 0.614584424 0.638394607 0.738694671 0.657043289 0.796723994 0.777581139 0.796152163 0.951040522 1.002705276 1 12.52054112 -7.313465215 0.56792031 1.030932576 0.639099346 0.901466008 0.04315973 0.247858696 0.165946125 0.041266286 0.031398005 4.86E-08 7.313465215 -0.39183323 HSS(ph)YPAGTEDDEGMGEEPSPFR ddPTM_A459_MK2206_30min_R2 2 HSSYPAGTEDDEGMGEEPSPFR 22 0 Q92934 Q92934 BAD Bcl2-associated agonist of cell death 1 HS(0.176)S(0.732)Y(0.092)PAGTEDDEGMGEEPSPFR;HS(0.189)S(0.803)Y(0.008)PAGTEDDEGMGEEPSPFR 158.75 3.06E-09 14036700 22208.6 33686.1 28582.2 33260 31557.2 33719 37159 31592.9 32292 30437.9 TRUE FALSE 23908.90749 32013.29726 29535.11628 30542.55161 30318.10577 35002.20017 32279.97866 35722.2005 35100.69979 29444.71382 0.811993203 1.087234111 1.003070244 1.037284716 1.029662097 1.188743093 1.096291133 1.213195711 1.192088332 1 14.84572103 -3.404352573 0.472882579 1.1409216 1.15E-12 0.520207587 0.07866607 13.17865769 0.821186081 0.047747606 11.10731073 0.000394137 3.404352573 -1.1409216 HSSAS(ph)FENVWLR ddPTM_A459_MK2206_30min_R2 1 HSSASFENVWLR 12 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 HS(0.005)S(0.005)AS(0.989)FENVWLR 78.548 0.043738 14592000 24042 25635 27472 36292 33074 32862 37747 23888 27354 26844 TRUE FALSE 25882.67401 24362.00318 28387.90277 33326.82751 31775.34858 34112.58644 32790.77356 27010.24362 29733.20148 25968.08248 0.996711021 0.938151794 1.093184404 1.283376527 1.223630917 1.31363517 1.262733726 1.040132387 1.144990259 1 14.66445187 -5.48527073 4.37206004 1.193837823 0.972470605 0.430642568 0.096853597 0.186472264 7.997702772 0.02706759 0.056141508 3.27E-06 5.48527073 -0.221367219 HSSIS(ph)PVR ddPTM_A459_MK2206_30min_R2 1 HSSISPVR 8 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 HSS(0.164)IS(0.836)PVR 80.916 0.029761 3535600 4225.7 5970.1 4617.2 10017 9339.9 15866 12447 8243.2 9945.3 6211.5 TRUE FALSE 4549.222841 5673.633515 4771.135144 9198.579057 8973.168597 16469.79175 10812.69395 9320.614543 10810.32422 6008.819264 0.757090976 0.944217702 0.794022076 1.530846353 1.493333083 2.740936451 1.799470657 1.551155749 1.799076281 1 12.55286581 -5.922186157 2.229158564 1.812284203 0.823788319 0.476922375 0.415286857 0.252151186 2.541217931 0.129549524 0.213928244 1.20E-06 5.922186157 -0.988495885 HSSSPLS(ph)PGGPTHLTKPTTTSSSER ddPTM_A459_MK2206_30min_R1 1 HSSSPLSPGGPTHLTKPTTTSSSER 25 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 HS(0.03)S(0.082)S(0.228)PLS(0.659)PGGPT(0.002)HLTKPTTTSSSER 50.493 0.015008 14218000 4137.1 2479.5 2759.9 2062 5306 4835.8 4752.9 3399.9 2362.4 2156.8 TRUE FALSE 3785.21792 2318.084099 2572.565678 2220.815597 5094.650784 5109.598817 4435.842713 3370.175033 2607.979934 2424.000667 1.561558118 0.956305058 1.061289179 0.9161778 2.101753046 2.107919724 1.829967612 1.390335852 1.075899017 1 11.24317438 -6.242112408 24.77543777 1.642292486 1.107398895 0.241963051 0.390863128 994.0690512 1274306.714 0.12149184 0.156599934 5.73E-07 6.242112408 -0.534893592 HSSSPLS(ph)PGGPTHLTKPTTTSSSER ddPTM_A459_MK2206_30min_R2 2 HSSSPLSPGGPTHLTKPTTTSSSER 25 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 HS(0.005)S(0.017)S(0.041)PLS(0.936)PGGPT(0.001)HLTKPTTTSSSER;HS(0.002)S(0.023)S(0.052)PLS(0.911)PGGPT(0.007)HLT(0.001)KPTTTSSSER 55.394 0.0055851 12212700 12973.4 29687 14908.2 49111 51709 89025 44358 26453 42997 22822 TRUE FALSE 13966.65348 28212.78675 15405.23195 45098.4742 49678.64484 92412.90876 38533.74132 29910.49793 46736.80134 22077.32001 0.632624498 1.277908131 0.697785417 2.042751302 2.250211748 4.185875311 1.74539941 1.354806558 2.116959908 1 14.43027743 -5.816343271 5.790234147 2.202629929 0.910470143 0.32052939 0.811736273 0.230467787 16.16336255 0.240990368 0.367506183 1.53E-06 5.816343271 -1.292159786 HSST(ph)GDSADAGPPAAGSAR ddPTM_A459_MK2206_30min_R2 1 HSSTGDSADAGPPAAGSAR 19 0 F5H1N7;Q6ZU35 F5H1N7 KIAA1211 Uncharacterized protein KIAA1211 1 HS(0.023)S(0.227)T(0.749)GDS(0.002)ADAGPPAAGSAR 130.01 0.00040159 5624600 8161.3 13637 8730.1 9793.6 8944.6 14405 10170 5613.6 9368.1 8970.7 TRUE FALSE 8786.135403 12959.80641 9021.157177 8993.431552 8593.390061 14953.19237 8834.666784 6347.316794 10182.9204 8677.986794 1.012462408 1.493411631 1.03954493 1.036349993 0.990251572 1.723117668 1.018054878 0.73142734 1.173419671 1 13.08314468 -7.505193031 24.96363598 0.946402258 1.21608938 0.18393899 0.243012346 1160.540364 1638125.85 0.102985223 0.067772761 3.12E-08 7.505193031 0.269687121 HSST(ph)PNSSEFSR ddPTM_A459_MK2206_30min_R1 1 HSSTPNSSEFSR 12 0 Q8N9Q2 Q8N9Q2 SREK1IP1 Protein SREK1IP1 1 HSS(0.002)T(0.974)PNS(0.019)S(0.004)EFSR 132.5 0.0043837 3190200 1384.7 1167.4 1230 1021 1877.6 1722.9 1853.2 1071.5 1222.4 932.57 TRUE FALSE 1266.923994 1091.402048 1146.511027 1099.637597 1802.811216 1820.449109 1729.576409 1062.131988 1349.472854 1048.103812 1.208777202 1.041311018 1.093890714 1.049168588 1.720069324 1.736897708 1.650195705 1.013384339 1.287537397 1 10.0335659 -6.229343795 24.7661046 1.43123661 1.093903095 0.256258646 0.249794789 823.7774764 635656.0361 0.078925633 0.101882907 5.90E-07 6.229343795 -0.337333515 HST(ph)SPASSEYSWK ddPTM_A459_MK2206_30min_R1 1 HSTSPASSEYSWK 13 0 Q96N46 Q96N46 TTC14 Tetratricopeptide repeat protein 14 1 HS(0.002)T(0.75)S(0.155)PAS(0.072)S(0.022)EYSWK 129.37 0.0032138 0 1713.7 1403 1364.8 1324.4 1858.6 2039.5 1913.1 1663.5 1078.9 873.87 TRUE FALSE 1567.940816 1311.664445 1272.161179 1426.405517 1784.568026 2154.974727 1785.48059 1648.956195 1191.055516 982.131613 1.596467108 1.335528179 1.295306211 1.452356791 1.81703552 2.194181206 1.817964686 1.678956438 1.212724955 1 9.939772559 -6.128881193 5.790047282 1.691689227 1.397909541 0.059353398 0.323497245 0.468191492 20.10019276 0.097839931 0.127493287 7.43E-07 6.128881193 -0.293779685 HST(ph)SPASSEYSWK ddPTM_A459_MK2206_30min_R2 3 HSTSPASSEYSWK 13 0 Q96N46 Q96N46 TTC14 Tetratricopeptide repeat protein 14 1 HS(0.09)T(0.455)S(0.455)PASSEYSWK;HS(0.054)T(0.473)S(0.473)PASSEYSWK;HST(0.93)S(0.07)PASSEYSWK 137.81 0.0026808 6310600 41340.7 68123 60052.1 87338 81790 64826 76570 56673 72880 43903.4 TRUE FALSE 44505.77578 64740.11088 62054.20704 80202.20602 78578.51364 67292.99886 66516.26702 64080.35569 79218.97066 42470.83565 1.047913824 1.524342761 1.461101626 1.888406592 1.850175831 1.584451961 1.566163368 1.508808449 1.865255756 1 15.37418487 -4.492919772 1.609349554 1.629223734 0.398106905 0.290846671 0.247840293 2.703271713 3.744685708 0.065439675 6.523692699 3.21E-05 4.492919772 -1.231116829 HSTENDS(ph)PTNVQQ ddPTM_A459_MK2206_30min_R1 2 HSTENDSPTNVQQ 13 0 B3KVN2;P49354-2;P49354 B3KVN2 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha 1 HST(0.001)ENDS(0.999)PTNVQQ;HS(0.001)T(0.004)ENDS(0.933)PT(0.062)NVQQ 223.22 6.04E-09 24224000 5253.3 3752.4 4595.5 3346.5 7012.4 5824.8 5211.1 4949.2 3408.1 3315.2 TRUE FALSE 4806.479249 3508.118078 4283.570264 3604.24801 6733.081259 6154.595142 4863.477027 4905.929666 3762.384191 3725.912004 1.290014161 0.941546143 1.149670271 0.96734652 1.807096155 1.651835882 1.305311833 1.316705725 1.009788794 1 11.86337789 -4.439632067 21.92006817 1.261100965 3.22793727 0 0.280710937 11337.48834 3157480.533 0.072924194 63943.19625 3.63E-05 4.439632067 1.966836305 HSTENDS(ph)PTNVQQ ddPTM_A459_MK2206_30min_R2 2 HSTENDSPTNVQQ 13 0 B3KVN2;P49354-2;P49354 B3KVN2 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha 1 HSTENDS(0.545)PT(0.455)NVQQ;HS(0.003)T(0.017)ENDS(0.975)PT(0.006)NVQQ 175.88 5.34E-10 19198000 17534.3 29141 24403 34635 38438 33405 38270 24076.9 31132 12868.9 TRUE FALSE 18876.73949 27693.90031 25216.58384 31805.20971 36928.73098 34676.25068 33245.10303 27223.8335 33839.80509 12448.98885 1.516327127 2.224590339 2.025592934 2.554842815 2.966404054 2.785467246 2.670506291 2.186830901 2.718277404 1 13.60374095 -4.504748544 1.09281673 2.485766427 0.581068888 0.167582947 0.535316747 4.308339635 2.855792191 0.15873361 10.95591681 3.13E-05 4.504748544 -1.90469754 HSTENDSPT(ph)NVQQ ddPTM_A459_MK2206_30min_R2 1 HSTENDSPTNVQQ 13 0 B3KVN2;P49354-2;P49354 B3KVN2 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha 1 HSTENDS(0.253)PT(0.747)NVQQ 108.68 0.01448 26263000 10185 13344 10970 18702 14355 13736 15904 13191 11579 6465.9 TRUE FALSE 10964.77143 12681.35636 11335.73432 17173.98678 13791.35057 14258.73311 13815.7857 14915.10899 12586.12049 6254.918213 1.752983981 2.027421612 1.812291375 2.745677272 2.20488104 2.279603445 2.208787585 2.38454101 2.012195853 1 12.6107753 -8.564849004 18.28253716 0.999999993 2.185123974 0.632930943 0.267298146 310.5835637 135293.1328 0.265141042 0.068459105 2.72E-09 8.564849004 1.185123981 HSTPS(ph)PTR ddPTM_A459_MK2206_30min_R1 2 HSTPSPTR 8 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 HST(0.001)PS(0.994)PT(0.006)R;HST(0.001)PS(0.996)PT(0.003)R 84.507 0.024654 2501700 3782.9 1441.25 1685.39 1916.33 1438.91 2036.64 3689.2 3926.6 170.243 1335.63 TRUE FALSE 3461.14449 1347.424363 1570.990423 2063.926069 1381.595168 2151.952797 3443.100199 3892.27015 187.9403691 1501.097928 2.305741968 0.89762589 1.046560916 1.374944319 0.920389764 1.433585882 2.293721239 2.592948853 0.125201938 1 10.55180238 -7.005856326 24.7201121 1.668276564 1.26544475 0 0.739617807 733.01636 3094141.991 0.261198391 0.223148756 9.87E-08 7.005856326 -0.402831814 HSTPS(ph)PTR ddPTM_A459_MK2206_30min_R2 2 HSTPSPTR 8 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 HS(0.005)T(0.123)PS(0.858)PT(0.013)R;HS(0.001)T(0.008)PS(0.94)PT(0.051)R 83.883 0.037826 61627000 42666.1 58620 37387 64455 82592 75155 66414 82860 79595 60226 TRUE FALSE 45932.64942 55709.01604 38633.46392 59188.82032 79349.02309 78015.07619 57693.76202 93690.0865 86518.02923 58260.83055 0.788396749 0.956200169 0.663112138 1.015928193 1.361961756 1.339065637 0.990266728 1.608114502 1.485011944 1 15.83023865 -6.07541737 3.733063869 1.312959614 0.818008208 0.573628725 0.192113103 0.170481342 4.543263303 0.058344104 0.079742865 8.41E-07 6.07541737 -0.494951406 HSTPSNSSNPSGPPS(ph)PNSPHR ddPTM_A459_MK2206_30min_R1 8 HSTPSNSSNPSGPPSPNSPHR 21 0 Q9Y5S2 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta 1 HSTPSNSSNPSGPPS(0.923)PNS(0.077)PHR;HSTPSNSSNPSGPPS(0.982)PNS(0.018)PHR;HSTPSNSSNPSGPPS(0.981)PNS(0.019)PHR;HSTPSNSSNPSGPPS(0.9)PNS(0.1)PHR;HSTPSNSSNPS(0.024)GPPS(0.854)PNS(0.122)PHR;HSTPSNSSNPS(0.001)GPPS(0.919)PNS(0.08)PHR;HSTPSNSSNPSGPPS(0.925)PNS(0.075)PHR;HSTPSNSSNPSGPPS(0.9)PNS(0.1)PHR 158.12 9.79E-08 35980710 5192.7 2255.28 2741.56 1730.25 8527.59 7550.7 6952.89 4845.15 2473.96 2339.14 TRUE FALSE 4751.033597 2108.460862 2555.470546 1863.514155 8187.918033 7978.214109 6489.075394 4802.789364 2731.136995 2628.930323 1.807211684 0.802022345 0.972057161 0.708848819 3.11454357 3.034775794 2.468332971 1.826898691 1.038877665 1 11.36026019 -4.486626252 20.73928129 1.724522727 2.274087348 0 0.875014444 29717.01223 1191748.966 0.236157273 709014.883 3.26E-05 4.486626252 0.549564621 HSTPSNSSNPSGPPS(ph)PNSPHR ddPTM_A459_MK2206_30min_R2 9 HSTPSNSSNPSGPPSPNSPHR 21 0 Q9Y5S2 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta 1 HSTPSNSSNPSGPPS(0.974)PNS(0.026)PHR;HSTPSNSSNPS(0.01)GPPS(0.979)PNS(0.011)PHR;HSTPSNSSNPSGPPS(0.908)PNS(0.092)PHR;HSTPSNSSNPSGPPS(0.788)PNS(0.212)PHR;HSTPSNSSNPSGPPS(0.99)PNS(0.01)PHR;HSTPSNSSNPSGPPS(0.5)PNS(0.5)PHR;HSTPSNSSNPSGPPS(0.964)PNS(0.036)PHR;HSTPSNSSNPS(0.131)GPPS(0.778)PNS(0.091)PHR;HSTPSNSSNPSGPPS(0.983)PNS(0.017)PHR 217.41 1.59E-20 58933300 10213.19 19524.61 10893.53 30327.65 28010.62 42012.96 28435.44 21128.31 35645.53 23719.67 TRUE FALSE 10995.11968 18555.04626 11256.71485 27849.78398 26910.78232 43611.79263 24701.83257 23889.85266 38745.91377 22945.69911 0.479179982 0.808650291 0.490580601 1.213725668 1.172802894 1.900652162 1.076534319 1.041147299 1.688591556 1 14.48593614 -5.836989122 4.993985874 1.320224222 0.614764165 0.56417081 0.284701294 0.149368738 6.722373421 0.080348242 0.123263683 1.46E-06 5.836989122 -0.705460057 HSTS(ph)PASSEYSWK ddPTM_A459_MK2206_30min_R1 1 HSTSPASSEYSWK 13 0 Q96N46 Q96N46 TTC14 Tetratricopeptide repeat protein 14 1 HST(0.003)S(0.919)PAS(0.059)S(0.017)EYS(0.002)WK 145.81 0.00082259 0 884.01 696.25 555.07 584.05 923.79 917.6 954.31 1027.3 694.62 681.7 TRUE FALSE 808.8203074 650.9239985 517.3933949 629.0336322 886.9934881 969.553719 890.6497211 1018.318424 766.8282347 766.1541426 1.055688748 0.849599268 0.675312403 0.821027516 1.157721976 1.265481272 1.162494166 1.329129959 1.000879839 1 9.581490867 -6.273223447 8.006605928 1.175599214 0.8376092 0.562126542 0.129533767 0.111443357 53.54885689 0.039623337 0.046729038 5.33E-07 6.273223447 -0.337990014 HSTSGT(ph)DEGEDGDEPDDGSNDVVDLLPR ddPTM_A459_MK2206_30min_R1 2 HSTSGTDEGEDGDEPDDGSNDVVDLLPR 28 0 Q14008-2;Q14008;Q14008-3 Q14008-2 CKAP5 Cytoskeleton-associated protein 5 1 HS(0.008)T(0.032)S(0.18)GT(0.781)DEGEDGDEPDDGSNDVVDLLPR;HS(0.005)T(0.017)S(0.064)GT(0.915)DEGEDGDEPDDGSNDVVDLLPR 195.49 5.95E-34 16956100 851.02 480.77 618.51 483.55 1120.39 775.46 1284.49 993.6 657.88 644.45 TRUE FALSE 778.6362801 449.4717856 576.5272645 520.7931048 1075.762494 819.3658751 1198.804016 984.91306 726.2689802 724.2893313 1.07503486 0.620569386 0.795990276 0.719040144 1.485266243 1.131268734 1.655145208 1.359833726 1.002733229 1 9.500422315 -6.253677022 24.97158652 1.302449457 0.789175951 0.518084874 0.220641469 434.1660688 1396715.784 0.06392854 0.080974263 5.58E-07 6.253677022 -0.513273505 HSTSGT(ph)DEGEDGDEPDDGSNDVVDLLPR ddPTM_A459_MK2206_30min_R2 2 HSTSGTDEGEDGDEPDDGSNDVVDLLPR 28 0 Q14008-2;Q14008;Q14008-3 Q14008-2 CKAP5 Cytoskeleton-associated protein 5 1 HS(0.01)T(0.037)S(0.052)GT(0.901)DEGEDGDEPDDGSNDVVDLLPR;HS(0.103)T(0.201)S(0.162)GT(0.534)DEGEDGDEPDDGSNDVVDLLPR 147.35 6.78E-14 6962200 5865.8 14451.2 9327.9 17512.8 11886.7 14520.8 15867.7 6844.2 10266.1 4900.2 TRUE FALSE 6314.890158 13733.57442 9638.88753 16081.94822 11419.96843 15073.39922 13784.25193 7738.76044 11159.02682 4740.306875 1.332169061 2.897191001 2.033388931 3.392596438 2.40912007 3.179836162 2.907881766 1.632544188 2.354072661 1 12.21076474 -8.708277024 0.994527146 1.025834326 2.593194323 0.34043192 0.621177566 0.857315914 1.717669518 0.577071728 0.188985566 1.96E-09 8.708277024 1.567359997 HSTSSLS(ph)PQR ddPTM_A459_MK2206_30min_R1 1 HSTSSLSPQR 10 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 HSTSSLS(1)PQR 76.728 0.041861 0 63.123 0 173.83 49.664 176.91 0 51.742 64.001 147.74 61.723 TRUE FALSE 57.75405738 0 162.0309039 53.48912989 169.8633001 0 48.29038559 63.441446 163.0981017 69.36971122 0.832554387 0 2.335758663 0.771073267 2.448666674 0 0.696130699 0.914541013 2.351142866 1 6.116233974 -5.225646794 24.99623973 1.263655917 0.416277231 0.164869635 0.802234518 1122.585432 783969.5538 0.199822226 0.528637962 5.95E-06 5.225646794 -0.847378686 HSTSSLS(ph)PQR ddPTM_A459_MK2206_30min_R2 3 HSTSSLSPQR 10 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 HSTS(0.001)S(0.016)LS(0.983)PQR;HST(0.001)S(0.001)S(0.009)LS(0.99)PQR;HSTSS(0.001)LS(0.999)PQR 89.46 0.020381 2003940 6293.43 5373.19 5805.3 9656.79 6862.18 6534.88 9350.9 6628.53 6238.51 5442.74 TRUE FALSE 6775.25984 5106.365198 5998.845805 8867.799366 6592.736334 6783.569438 8123.115598 7494.90163 6781.124323 5265.14384 1.286813817 0.969843437 1.139350792 1.684246364 1.252147431 1.288392045 1.542809816 1.423494183 1.287927648 1 12.36225723 -5.55905145 24.99903105 1.375672938 1.109895118 0.222814735 0.186563599 196.4225683 135747.1749 0.047932067 0.083021073 2.76E-06 5.55905145 -0.26577782 HSVTAAT(ph)PPPS(ph)PTSGESGDLLSNLLQSPSSAK ddPTM_A459_MK2206_30min_R2 2 HSVTAATPPPSPTSGESGDLLSNLLQSPSSAK 32 0 Q96QU8;Q96QU8-2 Q96QU8 XPO6 Exportin-6 2 HS(0.005)VT(0.03)AAT(0.616)PPPS(0.292)PT(0.292)S(0.285)GES(0.285)GDLLS(0.193)NLLQS(0.002)PS(0.001)S(0.001)AK;HS(0.006)VT(0.029)AAT(0.314)PPPS(0.485)PT(0.386)S(0.371)GES(0.371)GDLLS(0.037)NLLQS(0.002)PSSAK 68.326 0.002445 4509600 35032 34198 32339 39285 31936 34085 41494 24281 28969 33298 TRUE FALSE 37714.07686 32499.77705 33417.16612 36075.28983 30682.03217 35382.12856 36045.78796 27454.61007 31488.67126 32211.48899 1.170826871 1.008949852 1.037430034 1.119951016 0.952518283 1.098431947 1.119035136 0.852323532 0.977560251 1 14.97528773 -7.752833069 24.99967622 0.936206409 1.066873484 0.422097958 0.068888039 166.9402884 484933.0264 0.031832206 0.018005023 1.77E-08 7.752833069 0.130667075 HSVTAATPPPS(ph)PTSGESGDLLSNLLQSPSSAK ddPTM_A459_MK2206_30min_R2 2 HSVTAATPPPSPTSGESGDLLSNLLQSPSSAK 32 0 Q96QU8;Q96QU8-2 Q96QU8 XPO6 Exportin-6 1 HSVT(0.001)AAT(0.023)PPPS(0.43)PT(0.43)S(0.089)GES(0.025)GDLLS(0.002)NLLQSPSSAK;HSVT(0.002)AAT(0.022)PPPS(0.382)PT(0.382)S(0.099)GES(0.02)GDLLS(0.092)NLLQSPSSAK 87.772 1.59E-07 2703500 35316 37529 31888 37034 36281 29272 41806 32048 34783 35762 TRUE FALSE 38019.82011 35665.36443 32951.13 34008.20373 34856.42564 30385.96647 36316.82198 36236.78364 37808.36247 34595.08887 1.098994723 1.030937211 0.952479993 0.983035594 1.007554158 0.878331794 1.049768137 1.047454561 1.092882363 1 15.07827963 -10.38962587 5.143315519 0.999999984 1.010996384 0.000553025 0.062846497 1.23E-08 2.67E-09 0.063611146 0.015427946 4.08E-11 10.38962587 0.0109964 HSWDGLR ddPTM_A459_MK2206_30min_R2 1 HSWDGLR 7 0 Q86TI2-4;Q86TI2;M0R145;M0QXG6;M0R0I1;M0R3C4;M0R2G6;Q86TI2-2;M0R2A8 Q86TI2-4;M0R2A8 DPP9 Dipeptidyl peptidase 9 0 99.375 0.029861 1069100 9504.8 10255 11078 8595.1 8831.1 7282.3 8351.8 7726.8 5291.8 9010.1 FALSE TRUE 10232.4948 9745.751612 11447.33499 7892.852836 8484.346641 7559.433029 7255.198628 8736.71929 5752.071199 8716.101175 1.173976138 1.118131997 1.313354992 0.905548556 0.973410757 0.867295236 0.832390364 1.00236552 0.659936259 1 13.08946723 -5.778632255 24.0734656 0.891595781 1.193452066 0.649233725 0.104451357 88.39772161 123774.2323 0.028011494 0.041678702 1.66E-06 5.778632255 0.301856285 HT(ph)PYGNQTDYR ddPTM_A459_MK2206_30min_R2 1 HTPYGNQTDYR 11 0 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70 A0A6E1WJ75 LDB1 LIM domain-binding protein 1 1 HT(0.999)PY(0.001)GNQTDYR 85.457 0.047241 3735800 25472 23665 15611 19571 17457 13432 23767 24151 19116 12684 TRUE FALSE 27422.1559 22489.83051 16131.46295 17971.9867 16771.55047 13943.16417 20646.36435 27307.61862 20778.67513 12270.12212 2.234872289 1.83289378 1.314694572 1.464695015 1.366860925 1.136350889 1.682653534 2.22553764 1.693436701 1 13.58286199 -7.513073959 24.94231412 1.766511376 1.535385463 0 0.402828555 1490.859046 3792611.863 0.183012759 0.113613668 3.07E-08 7.513073959 -0.231125913 HT(ph)STLAAMKLMT(ph)SL ddPTM_A459_MK2206_30min_R1 1 HTSTLAAMKLMTSL 14 1 C9J3T3 C9J3T3 STAG3 2 HT(0.991)S(0.009)T(0.019)LAAMKLMT(0.921)S(0.06)L 64.842 0.023357 2628100 534.02 355.2 346.33 407.8 384.3 429.91 281.54 473.8 168.38 386.43 TRUE FALSE 488.5987947 332.0764154 322.8220845 439.2088267 368.9925172 454.2511327 262.7589803 469.6576166 185.8837036 434.3038658 1.125015993 0.764617683 0.743309259 1.011293846 0.849618312 1.045929287 0.605011838 1.081403261 0.428003797 1 8.762560984 -7.24876664 24.9794294 0.785388314 0.908554181 0.103634578 0.205358839 2058.963095 4058460.05 0.073878316 0.056838108 5.64E-08 7.24876664 0.123165867 HTDDEMT(ph)GYVATR ddPTM_A459_MK2206_30min_R2 1 HTDDEMTGYVATR 13 0 Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539;E7EX54;B4E0K5 Q16539-5 MAPK14 Mitogen-activated protein kinase 14 1 HTDDEMT(0.616)GY(0.384)VATR 152 0.0010531 19063000 15440 20879 17198 15757 22583 16973 18346 18234 21073 17007 TRUE FALSE 16622.09827 19842.17922 17771.37274 14469.6027 21696.27795 17618.91941 15937.14816 20617.24641 22905.89145 16452.06298 1.010335196 1.206060252 1.080191144 0.879500809 1.318757287 1.070924627 0.968702112 1.25317089 1.392280802 1 14.00598088 -7.788444261 24.88279194 1.242044568 1.08303262 0.15196054 0.145574206 351.8574132 324202.6898 0.077139269 0.037072048 1.63E-08 7.788444261 -0.159011948 HTDDEMTGY(ph)VATR ddPTM_A459_MK2206_30min_R1 3 HTDDEMTGYVATR 13 0 Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539;E7EX54;B4E0K5 Q16539-5 MAPK14 Mitogen-activated protein kinase 14 1 HTDDEMT(0.204)GY(0.796)VATR;HTDDEMT(0.003)GY(0.997)VATR;HTDDEMTGY(0.999)VATR 209.8 6.14E-29 22215000 5501.82 3908.17 5188.84 4540.9 5120.15 4983.56 4774.94 5042.55 3550.36 4271.27 TRUE FALSE 5033.861318 3653.747423 4836.635998 4890.640905 4916.203583 5265.72486 4456.412465 4998.463517 3919.432627 4800.427174 1.048627786 0.761129643 1.007542834 1.018792855 1.024117939 1.096928392 0.928336647 1.0412539 0.816475802 1 12.22894708 -4.457343806 23.90134817 0.970896 3.912635659 0.057116301 0.098898906 2908.528782 1121586.143 0.023644731 26280.74675 3.49E-05 4.457343806 2.941739659 HTDDEMTGY(ph)VATR ddPTM_A459_MK2206_30min_R2 1 HTDDEMTGYVATR 13 0 Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539;E7EX54;B4E0K5 Q16539-5 MAPK14 Mitogen-activated protein kinase 14 1 HTDDEMTGY(0.999)VAT(0.001)R 174.46 0.00080197 28935000 100950 75865 98513 111000 101970 88614 100430 78320 90156 91748 TRUE FALSE 108678.8096 72097.65442 101797.3743 101930.9449 97966.14544 91986.26786 87243.42036 88556.69291 97997.60592 88754.27027 1.22449105 0.812328851 1.146957481 1.14846243 1.103790783 1.036415122 0.982977158 0.997773883 1.10414525 1 16.43752891 -6.929140944 6.290920757 1.019480135 1.078344571 0.079662719 0.105715334 0.656683532 45.00968284 0.037387465 0.032869392 1.18E-07 6.929140944 0.058864436 HTENTFSR ddPTM_A459_MK2206_30min_R2 2 HTENTFSR 8 0 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1;C9J813 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 0 ; 146.79 0.002531 2426300 8152.5 7152.3 7851.4 8414.4 7889.9 6211.7 8308.3 8778.6 7637.1 9502.9 FALSE TRUE 8776.661668 6797.127182 8113.161757 7726.916604 7580.102882 6448.090596 7217.41023 9925.993161 8301.361153 9192.821151 0.954729949 0.739395129 0.882554074 0.84053812 0.824567644 0.701426743 0.785113744 1.079754843 0.903026505 1 13.16629196 -7.749997828 24.99992414 0.993543013 0.814363747 0.519391158 0.077485406 160.0543434 349722.4379 0.036025219 0.020568476 1.78E-08 7.749997828 -0.179179265 HTGMASIDSSAPETTSDS(ph)SPTLSR ddPTM_A459_MK2206_30min_R1 1 HTGMASIDSSAPETTSDSSPTLSR 24 0 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2;H0YCW2;S4R3B3;H7C453;S4R3U7 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 HTGMASIDSSAPETT(0.007)S(0.06)DS(0.493)S(0.376)PT(0.017)LS(0.046)R 146.45 1.28E-09 8646800 1773.2 1732.9 1853.1 1834.3 2104.7 1991.2 2014.8 1845.3 1702.6 1511.6 TRUE FALSE 1622.380029 1620.087895 1727.316735 1975.578104 2020.865342 2103.940023 1880.396368 1829.166737 1879.591363 1698.86842 0.95497686 0.953627648 1.016745449 1.16287882 1.189536116 1.238436125 1.106852271 1.076697121 1.106378423 1 10.7303584 -5.601947977 3.773242088 1.135335211 0.958944772 0.563834289 0.061740338 0.158960053 4.417042041 0.018025658 0.033728573 2.50E-06 5.601947977 -0.176390439 HTGMASIDSSAPETTSDS(ph)SPTLSR ddPTM_A459_MK2206_30min_R2 2 HTGMASIDSSAPETTSDSSPTLSR 24 0 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2;H0YCW2;S4R3B3;H7C453;S4R3U7 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 HTGMASIDSSAPETT(0.005)S(0.194)DS(0.368)S(0.233)PT(0.051)LS(0.149)R;HTGMASIDSSAPETT(0.005)S(0.06)DS(0.459)S(0.27)PT(0.045)LS(0.161)R 174.26 8.78E-17 19654000 35190 44536 40374 68001 47452 67636 61285 42760 49564 33445 TRUE FALSE 37884.17346 42324.407 41720.04901 62445.10078 45588.79605 70209.93537 53238.20588 48348.87882 53874.98713 32353.69239 1.170938173 1.308178569 1.289498846 1.930076482 1.409075524 2.170074888 1.645506338 1.494385192 1.66518821 1 14.98164275 -5.646098809 8.604790412 1.652179884 1.25489706 0.234045618 0.294123715 0.325510107 23.10249613 0.075866542 0.13161097 2.26E-06 5.646098809 -0.397282824 HTGPGILSMANAGPNTNGSQFFICTAK ddPTM_A459_MK2206_30min_R1 1 HTGPGILSMANAGPNTNGSQFFICTAK 27 0 P62937;F8WE65;C9J5S7;P62937-2 P62937 PPIA "Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase" 0 123.03 1.09E-11 15540000 3147.1 3253.4 3389.2 3121.7 3667.8 3857.5 3630.3 3467.9 3111.7 3346.8 FALSE TRUE 2879.422619 3041.603069 3159.150547 3362.133875 3521.703759 4075.908316 3388.129311 3437.580516 3435.17235 3761.426851 0.76551339 0.808630126 0.839880894 0.893845343 0.936268044 1.08360696 0.9007564 0.913903328 0.913263101 1 11.87706432 -5.754880977 1.537704206 0.956598197 0.783888534 0.651872694 0.051156766 0.272645149 1.301865339 0.017713334 0.040252556 1.76E-06 5.754880977 -0.172709664 HTGPNS(ph)PDTANDGFVR ddPTM_A459_MK2206_30min_R1 12 HTGPNSPDTANDGFVR 16 0 P31943;G8JLB6;E9PCY7;D6RBM0;E5RGV0;D6RIT2;D6RIU0;D6R9T0;D6RFM3;D6RDU3;D6RJ04;D6RIH9;D6RAM1;E5RGH4;H0YAQ2;E7EQJ0;P55795 P31943;E7EQJ0;P55795 HNRNPH1;HNRNPH2 "Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2" 1 HTGPNS(0.967)PDT(0.033)ANDGFVR;HTGPNS(0.868)PDT(0.132)ANDGFVR;HTGPNS(0.982)PDT(0.018)ANDGFVR;HTGPNS(0.997)PDT(0.003)ANDGFVR;HTGPNS(0.983)PDT(0.017)ANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(0.998)PDT(0.002)ANDGFVR;HTGPNS(0.978)PDT(0.022)ANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(0.899)PDT(0.101)ANDGFVR;HTGPNS(1)PDTANDGFVR 331.4 1.16E-134 1515224000 22249.6 23213.12 22402.71 21396.07 23351.87 20543.07 21663.02 20803.65 21027.06 19819.36 TRUE FALSE 20357.15468 21701.94167 20882.07646 23043.99902 22421.71557 21706.20087 20217.91946 20621.76588 23212.89813 22274.73195 0.913912443 0.9742852 0.937478238 1.034535413 1.006598671 0.974476412 0.907661628 0.925791876 1.042117956 1 14.44312045 -3.953307249 1.429421739 0.976349419 0.507548149 0.16898215 0.042425417 23.3882979 7.27494877 0.012661174 27.64613875 0.000111351 3.953307249 -0.46880127 HTGPNS(ph)PDTANDGFVR ddPTM_A459_MK2206_30min_R2 9 HTGPNSPDTANDGFVR 16 0 P31943;G8JLB6;E9PCY7;D6RBM0;E5RGV0;D6RIT2;D6RIU0;D6R9T0;D6RFM3;D6RDU3;D6RJ04;D6RIH9;D6RAM1;E5RGH4;H0YAQ2;E7EQJ0;P55795 P31943;E7EQJ0;P55795 HNRNPH1;HNRNPH2 "Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2" 1 HTGPNS(0.975)PDT(0.024)ANDGFVR;HTGPNS(0.97)PDT(0.03)ANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(0.609)PDT(0.391)ANDGFVR;HTGPNS(1)PDTANDGFVR;HT(0.016)GPNS(0.984)PDTANDGFVR;HTGPNS(0.999)PDT(0.001)ANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(0.99)PDT(0.01)ANDGFVR 263.07 2.43E-39 2047539000 446196 587046 524697 575781 639617 558836 626497 480935 554446 361049.2 TRUE FALSE 480357.1088 557894.1493 542190.1361 528737.8505 614502.4228 580102.8956 544237.1913 543794.8558 602670.7109 349268.1942 1.375324512 1.597323085 1.552360464 1.513844831 1.759399891 1.660909597 1.558221448 1.556954984 1.72552417 1 18.41397575 -10.66207988 5.024287079 0.999972024 1.59113539 0.743624792 0.103722371 3.26E-05 5.59E-06 0.100862595 0.024461618 2.18E-11 10.66207988 0.591163366 HTGPNS(ph)PDTANDGFVRL ddPTM_A459_MK2206_30min_R2 3 HTGPNSPDTANDGFVRL 17 1 E7EQJ0 E7EQJ0 HNRNPH1 1 HTGPNS(1)PDTANDGFVRL;HTGPNS(1)PDTANDGFVRL;HT(0.012)GPNS(0.987)PDT(0.001)ANDGFVRL 126.25 0.00060762 13115200 18516.3 48859.3 34713.3 113467 51228 41175.6 34947.4 23024.3 38096.6 20652.3 TRUE FALSE 19933.92216 46433.01821 35870.6241 104196.3831 49216.53132 42742.56631 30358.7644 26033.65506 41410.17341 19978.41714 0.997772848 2.32415901 1.795468772 5.21544737 2.463485018 2.139437074 1.519578062 1.303088972 2.072745459 1 14.28615466 -7.037965083 2.755568853 1.500064452 2.642011668 0.193486429 1.038704902 0.491418066 7.442115481 0.450134959 0.352837498 9.16E-08 7.037965083 1.141947216 HTGPNSPDTANDGFVR ddPTM_A459_MK2206_30min_R1 4 HTGPNSPDTANDGFVR 16 0 P31943;G8JLB6;E9PCY7;D6RBM0;E5RGV0;D6RIT2;D6RIU0;D6R9T0;D6RFM3;D6RDU3;D6RJ04;D6RIH9;D6RAM1;E5RGH4;H0YAQ2;E7EQJ0;P55795 P31943;E7EQJ0;P55795 HNRNPH1;HNRNPH2 "Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2" 0 ;;; 222.75 6.75E-11 47762000 11619.2 9222.2 9655.3 8590.24 12706 11662.7 11467.7 10717.8 8231.6 7440.96 FALSE TRUE 10630.92603 8621.833104 8999.925137 9251.861773 12199.89311 12323.032 10702.71066 10624.0954 9087.304277 8362.802301 1.271215753 1.030974163 1.076185328 1.106311191 1.458828354 1.473552949 1.279799554 1.270398967 1.086633876 1 13.02977074 -4.448191704 22.15814126 1.215156458 3.804069864 0.008308012 0.161638159 3243.162688 1074960.236 0.042543052 49123.52514 3.56E-05 4.448191704 2.588913407 HTNPSSS(ph)SPGTR ddPTM_A459_MK2206_30min_R2 2 HTNPSSSSPGTR 12 0 Q8WUH2 Q8WUH2 TGFBRAP1 Transforming growth factor-beta receptor-associated protein 1 1 HTNPSS(0.003)S(0.488)S(0.488)PGT(0.021)R;HTNPS(0.001)S(0.004)S(0.497)S(0.497)PGT(0.001)R 139.77 0.00074764 9246700 3284.6 4995.2 3657.79 5660 5320.6 5633.71 6346.9 5445.9 5746.73 2946.3 TRUE FALSE 3536.071501 4747.145632 3779.738893 5197.559895 5111.68651 5848.104782 5513.544406 6157.697829 6246.570188 2850.162472 1.240656116 1.665570183 1.326148572 1.823601267 1.793471972 2.051849619 1.934466705 2.160472565 2.191654072 1 11.47682845 -5.872275634 4.440313256 1.918126244 1.437143748 0.25331198 0.334106368 0.261179767 8.906355026 0.090600325 0.139114841 1.34E-06 5.872275634 -0.480982496 HTNPSSSS(ph)PGTR ddPTM_A459_MK2206_30min_R2 3 HTNPSSSSPGTR 12 0 Q8WUH2 Q8WUH2 TGFBRAP1 Transforming growth factor-beta receptor-associated protein 1 1 HTNPSS(0.002)S(0.209)S(0.773)PGT(0.015)R;HTNPS(0.06)S(0.06)S(0.202)S(0.678)PGTR;HTNPS(0.001)S(0.001)S(0.208)S(0.79)PGTR 147.52 0.00062738 3201410 9068.8 10375.6 10189.2 11977 14310.7 11307 15243.5 14353 12140.2 10063.2 TRUE FALSE 9763.114301 9860.362792 10528.90284 10998.44079 13748.79001 11737.29581 13242.01014 16228.98638 13196.13265 9734.838608 1.002904588 1.012894326 1.081569327 1.129802068 1.4123285 1.205700092 1.360270126 1.667103794 1.355557414 1 13.24894135 -6.037401352 1.334258125 1.373993505 1.002734366 0.40302295 0.162216525 0.398478359 1.438765087 0.059079419 0.104324772 9.17E-07 6.037401352 -0.371259139 HTNPSSSS(ph)PGTRT ddPTM_A459_MK2206_30min_R1 2 HTNPSSSSPGTRT 13 1 Q8WUH2 Q8WUH2 TGFBRAP1 Transforming growth factor-beta receptor-associated protein 1 1 HTNPSSS(0.004)S(0.884)PGT(0.056)RT(0.056);HTNPS(0.009)S(0.031)S(0.105)S(0.855)PGTRT 154.72 0.00067727 4197800 1867.35 1138.3 1385.36 1215.47 1950.79 1403.84 2008.65 1766.53 507.79 853.86 TRUE FALSE 1708.522077 1064.196463 1291.325623 1309.08571 1873.085903 1483.324208 1874.656623 1751.085414 560.5765876 959.6426231 1.780373272 1.108950809 1.345631792 1.364138773 1.951857763 1.545704799 1.953494539 1.824726593 0.584151406 1 9.906353427 -8.262317398 24.99683733 0.792075648 1.596480456 0.576753911 0.27987519 59.96416566 1707009.32 0.238125141 0.075154104 5.47E-09 8.262317398 0.804404808 HTNPSSSS(ph)PGTRT ddPTM_A459_MK2206_30min_R2 2 HTNPSSSSPGTRT 13 1 Q8WUH2 Q8WUH2 TGFBRAP1 Transforming growth factor-beta receptor-associated protein 1 1 HTNPSS(0.001)S(0.033)S(0.688)PGT(0.128)RT(0.15);HTNPSSS(0.139)S(0.86)PGT(0.001)RT(0.001) 110.32 0.0028927 7615310 1723.46 5258.1 3000.26 3440.74 4627.4 5882.1 3419.17 5155.6 5169.3 3103.6 TRUE FALSE 1855.409423 4996.9904 3100.287171 3159.620536 4445.705025 6105.947437 2970.228872 5829.454622 5618.91637 3002.329786 0.617989879 1.664370924 1.032627124 1.052389564 1.48075173 2.033736422 0.989307999 1.941643669 1.871518711 1 11.55186674 -6.37455492 4.84653064 1.605147615 1.130361038 0.229035845 0.409943109 0.340700831 12.26788066 0.124581291 0.141738278 4.22E-07 6.37455492 -0.474786576 HTNYTMEHIR ddPTM_A459_MK2206_30min_R1 11 HTNYTMEHIR 10 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144;P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;H7C5W8;F6THM6;H0YJ11;A0A494C060;H0YJW3 O43707;P12814-4 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 0 ;;;;;;;;;; 229.82 3.62E-06 143159800 17440.08 18229.36 18579.99 15791.15 19788.22 18434.43 19890.61 19119.27 17021.04 16003.64 FALSE TRUE 15956.70961 17042.62535 17318.83205 17007.38711 19000.0133 19478.1715 18563.7437 18952.11224 18790.43802 17986.29174 0.887159501 0.947534133 0.962890644 0.945574961 1.056360787 1.082945377 1.032105114 1.053697589 1.044708842 1 14.13461015 -6.24095794 6.545839545 1.049008737 0.938079605 0.796562386 0.026978682 0.07613307 14.07724584 0.008088707 0.010159588 5.74E-07 6.24095794 -0.110929132 HTNYTMEHIR ddPTM_A459_MK2206_30min_R2 10 HTNYTMEHIR 10 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144;P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;H7C5W8;F6THM6;H0YJ11;A0A494C060;H0YJW3 O43707;P12814-4 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 0 ;;;;;;;;; 169.99 0.00012319 129383900 40294.24 54891.58 49333.73 49569.8 46399.82 49917.5 54383.9 37455.87 42857.12 42168.51 FALSE TRUE 43379.198 52165.74396 50978.49194 45519.78877 44577.92993 51817.14544 47243.2286 42351.48081 46584.75483 40792.55497 1.063409684 1.278805507 1.249700882 1.11588472 1.092795731 1.270259867 1.158133601 1.03821594 1.141991593 1 15.31601825 -8.377438969 0.624023455 1.002616382 1.18633102 0.309641068 0.077601144 0.938559915 0.865115804 0.079821931 0.03529489 4.19E-09 8.377438969 0.183714638 HTPPTIGGS(ph)LPYR ddPTM_A459_MK2206_30min_R1 3 HTPPTIGGSLPYR 13 0 H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;E9PEZ7;H7C3Q7 H0Y6B5;H7C3Q7 ABI2 Abl interactor 2 1 HTPPT(0.001)IGGS(0.998)LPY(0.001)R;HT(0.002)PPT(0.4)IGGS(0.598)LPYR;HTPPT(0.001)IGGS(0.999)LPYR 139.64 0.00092431 39799600 11935.2 11131.7 10556.2 8789.6 9309.5 8636.9 9529.9 8983.9 7697.3 6988.3 TRUE FALSE 10920.04857 10407.02431 9839.674555 9466.576515 8938.682902 9125.913814 8894.177759 8905.354709 8497.46188 7854.063363 1.390369298 1.3250497 1.252813238 1.205309415 1.138096612 1.161935344 1.1324301 1.133853179 1.081919191 1 12.93922352 -1.522878745 0.206048003 1.017779227 2.886301294 0.962288867 0.021244815 9.782118337 0.120387882 0.040274757 5.954424088 0.03 1.522878745 1.868522067 HTPPTIGGS(ph)LPYR ddPTM_A459_MK2206_30min_R2 4 HTPPTIGGSLPYR 13 0 H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;E9PEZ7;H7C3Q7 H0Y6B5;H7C3Q7 ABI2 Abl interactor 2 1 HTPPT(0.001)IGGS(0.999)LPYR;HTPPT(0.014)IGGS(0.986)LPYR;HTPPT(0.001)IGGS(0.999)LPYR;HTPPTIGGS(1)LPYR 140.49 0.00058156 53124000 159058 181360 173985 177890 161483 163309 179262 132767 153931 133143 TRUE FALSE 171235.6028 172353.9261 179785.5731 163355.818 155142.366 169523.8384 155724.6841 150120.1028 167319.6401 128798.5548 1.329483883 1.338166615 1.395866385 1.268304743 1.204534991 1.316193638 1.209056144 1.165541826 1.299080105 1 16.97475688 -14.52287874 0.09363288 0.095009148 1.493403175 0.726395578 0.056288347 105.3609392 0.677877357 18.81358651 1.181921082 3.00E-15 14.52287874 1.398394026 HTPSPGLPAEGAPEAPRPS(ph)SPPPEVLEPHSLDQPPATSPR ddPTM_A459_MK2206_30min_R2 3 HTPSPGLPAEGAPEAPRPSSPPPEVLEPHSLDQPPATSPR 40 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 HTPSPGLPAEGAPEAPRPS(0.499)S(0.499)PPPEVLEPHS(0.001)LDQPPATSPR;HT(0.003)PS(0.008)PGLPAEGAPEAPRPS(0.491)S(0.491)PPPEVLEPHS(0.007)LDQPPATSPR;HT(0.001)PS(0.002)PGLPAEGAPEAPRPS(0.498)S(0.498)PPPEVLEPHSLDQPPATSPR 65.774 1.15E-07 33941900 15840.6 17460.7 18452.2 20064.5 22316.7 21181.5 19662.1 19661.1 14406 21058.8 TRUE FALSE 17053.36852 16593.62703 19067.38714 18425.16617 21440.43423 21987.57683 17080.44265 22230.87328 15659.00784 20371.65308 0.837112651 0.814544945 0.935976431 0.904451205 1.052464134 1.079322171 0.838441661 1.091265063 0.768666528 1 14.31427543 -5.445725302 1.797104058 0.971503433 0.819455954 0.225206093 0.098494374 0.544086128 3.306792959 0.027904165 0.087882904 3.58E-06 5.445725302 -0.152047479 HTTFEQPVFSVS(ph)KQSPPISTSK ddPTM_A459_MK2206_30min_R1 1 HTTFEQPVFSVSKQSPPISTSK 22 1 P33981-2;P33981 P33981-2 TTK Dual specificity protein kinase TTK 1 HT(0.001)T(0.001)FEQPVFS(0.206)VS(0.387)KQS(0.387)PPIS(0.006)T(0.006)S(0.007)K 47.485 0.030915 9562600 2485.7 1151.3 1396.3 1257.8 3771.1 3412.2 3194 2905.7 1220.3 1323.6 TRUE FALSE 2274.278162 1076.350161 1301.523046 1354.675974 3620.889102 3605.395815 2980.934088 2880.295771 1347.154552 1487.577561 1.528846779 0.723559019 0.874927856 0.910659054 2.434084244 2.423669132 2.003884817 1.936232333 0.905602899 1 10.53874918 -6.239680236 24.66767695 1.873710335 0.979461655 0.337695189 0.521622592 712.4009267 807626.8866 0.156374671 0.201687243 5.76E-07 6.239680236 -0.894248679 HTTFEQPVFSVS(ph)KQSPPISTSK ddPTM_A459_MK2206_30min_R2 2 HTTFEQPVFSVSKQSPPISTSK 22 1 P33981-2;P33981 P33981-2 TTK Dual specificity protein kinase TTK 1 HTTFEQPVFS(0.001)VS(0.496)KQS(0.496)PPIS(0.002)T(0.003)S(0.001)K;HTTFEQPVFS(0.112)VS(0.654)KQS(0.233)PPIS(0.001)TSK 93.5 0.00011618 23645000 44773 123839 80618 174452 187348 204929 202360 118241 186420 110154 TRUE FALSE 48200.8553 117689.3353 83305.76388 160198.7136 179991.7762 212727.7167 175789.8889 133695.5047 202634.4746 106559.684 0.452336695 1.104445236 0.781775628 1.503370764 1.689117023 1.996324583 1.649684781 1.254653727 1.901605439 1 16.70130218 -5.8039637 4.495532579 1.616318977 0.805489289 0.576055097 0.310090377 0.138324437 6.070665017 0.085562665 0.135624764 1.57E-06 5.8039637 -0.810829688 HTTSVS(ph)PSPAGR ddPTM_A459_MK2206_30min_R2 2 HTTSVSPSPAGR 12 0 C9J637;A0A590UJ51;H0Y7H7;H0Y599;Q8N1I0-2;Q8N1I0;Q8N1I0-3;Q8N1I0-4 C9J637 DOCK4 Dedicator of cytokinesis protein 4 1 HTTS(0.006)VS(0.979)PS(0.014)PAGR;HTTS(0.001)VS(0.999)PS(0.001)PAGR 108.58 0.0052924 2020500 6158 10528.7 8410.7 12013.4 11136.8 15447 12449.8 11113.3 10296.7 7907 TRUE FALSE 6629.461215 10005.86007 8691.10854 11031.86679 10699.51327 16034.84641 10815.12631 12565.84647 11192.28835 7648.995238 0.866710072 1.308127376 1.136241855 1.442263519 1.398812908 2.09633369 1.413927708 1.642810079 1.463236413 1 12.90105453 -5.705967223 1.382218008 1.559783666 1.049153525 0.292658245 0.274706648 0.525096147 1.982141258 0.088485428 0.23010421 1.97E-06 5.705967223 -0.510630141 HTVDDGLDIR ddPTM_A459_MK2206_30min_R2 2 HTVDDGLDIR 10 0 Q86VP6-2;Q86VP6;A0A0C4DGH5 Q86VP6-2 CAND1 Cullin-associated NEDD8-dissociated protein 1 0 ; 161.67 0.00059233 10561500 24434.7 29552 25067 29262 28632 23988 29150 23302.9 26071.7 24234 FALSE TRUE 26305.43942 28084.49065 25902.72127 26871.201 27507.76382 24900.88015 25322.56998 26348.66904 28339.36934 23443.24656 1.122090294 1.197977873 1.104911864 1.146223537 1.173376893 1.062177121 1.080164811 1.123934305 1.208850031 1 14.51688476 -6.749725943 24.99554333 1.101842365 1.149047478 0.189688997 0.054792826 442.0951984 943394.9834 0.017987427 0.01784837 1.78E-07 6.749725943 0.047205113 HTVLYIS(ph)PPPEDLLDNSR ddPTM_A459_MK2206_30min_R1 4 HTVLYISPPPEDLLDNSR 18 0 O94916;O94916-4;O94916-5;O94916-2 O94916 NFAT5 Nuclear factor of activated T-cells 5 1 HTVLYIS(1)PPPEDLLDNSR;HT(0.001)VLY(0.006)IS(0.993)PPPEDLLDNSR;HT(0.001)VLY(0.029)IS(0.97)PPPEDLLDNSR;HT(0.012)VLY(0.176)IS(0.812)PPPEDLLDNSR 121.91 0.00060934 18194100 7517.43 7856.56 7362.51 6600.87 7811.23 7248.42 8001.09 6935.97 6866.37 8057.54 TRUE FALSE 6878.033103 7345.096516 6862.763334 7109.270151 7500.092169 7658.819276 7467.351885 6875.329546 7580.153733 9055.768887 0.759519505 0.811095845 0.757833313 0.785054283 0.828211526 0.84573926 0.82459612 0.75922096 0.837052472 1 13.14462142 -14.52287875 0.255800448 2.248808551 0.784700502 0.805195655 0.029919336 85.12420044 0.838431977 55.74062623 0.043628663 3.00E-15 14.52287875 -1.464108049 HTVLYIS(ph)PPPEDLLDNSR ddPTM_A459_MK2206_30min_R2 2 HTVLYISPPPEDLLDNSR 18 0 O94916;O94916-4;O94916-5;O94916-2 O94916 NFAT5 Nuclear factor of activated T-cells 5 1 HTVLYIS(1)PPPEDLLDNSR;HT(0.013)VLY(0.009)IS(0.978)PPPEDLLDNSR 114.76 0.0007128 6555700 64223 71011 59297 69749 65595 58467 68008 51574 50997 67959 TRUE FALSE 69139.96226 67484.697 61273.93238 64050.28358 63019.41071 60692.00265 59078.46791 58314.89888 55432.62688 65741.5034 1.051694268 1.026515877 0.93204337 0.974274701 0.958594 0.923191584 0.89864796 0.887033242 0.84319074 1 16.00451683 -4.61196708 0.506200195 0.90194317 1.188066234 0.543931486 0.041853149 3.825127912 0.663993085 0.025664969 0.675948763 2.44E-05 4.61196708 0.286123064 HVAT(ph)VQNEEEAQKGK ddPTM_A459_MK2206_30min_R1 1 HVATVQNEEEAQKGK 15 1 A0A3B3ITU3;Q9H246 A0A3B3ITU3 C1orf21 Uncharacterized protein C1orf21 1 HVAT(1)VQNEEEAQKGK 54.281 0.03744 1463200 608.96 352.47 295.45 259.66 753.05 509.12 768.57 688.53 406.28 328.31 TRUE FALSE 557.1647542 329.5241389 275.3956772 279.6590582 723.0544239 537.9459344 717.3000976 682.5102548 448.5142599 368.9835214 1.509999016 0.893059228 0.746363079 0.757917473 1.959584594 1.457913167 1.943989517 1.84970389 1.215540082 1 8.527412578 -6.254282961 24.99812676 1.626590019 0.954388462 0.399025101 0.352955604 511.9710576 1788367.886 0.103063944 0.130258718 5.57E-07 6.254282961 -0.672201557 HVDSLSQR ddPTM_A459_MK2206_30min_R2 4 HVDSLSQR 8 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 Sep-09 Septin-9 0 ;;; 171.53 0.0002243 9138400 8808.58 15770.67 12879.3 18474.4 17404.7 18903.8 16748.6 14666.6 15270 14380.9 FALSE TRUE 9482.971657 14987.52146 13308.68943 16964.98242 16721.30403 19623.19736 14549.4887 16583.57498 16598.157 13911.65241 0.681656742 1.07733582 0.956657703 1.219480039 1.201963903 1.410558342 1.045849068 1.192063638 1.193111825 1 13.76400617 -4.332196608 0.972146449 1.186388786 2.41E-10 0.578005528 0.121047957 2.963614329 1.230030312 0.038887235 4.542661009 4.65E-05 4.332196608 -1.186388785 HVDSLSQRS(ph)PK ddPTM_A459_MK2206_30min_R1 3 HVDSLSQRSPK 11 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 Sep-09 Septin-9 1 HVDSLS(0.003)QRS(0.997)PK;HVDSLS(0.007)QRS(0.993)PK;HVDSLS(0.002)QRS(0.998)PK 113.07 0.00402 102268000 12701.7 9289.3 12286.7 14966.7 19389.4 12187.9 9138.6 19160.4 1714.33 1239.99 TRUE FALSE 11621.35372 8684.564882 11452.71304 16119.43783 18617.07914 12877.96837 8528.980668 18992.88264 1892.540738 1393.609323 8.339032702 6.231706936 8.218022692 11.56668341 13.35889394 9.240730638 6.120065738 13.62855596 1.358013833 1 10.44461046 -8.282285344 23.93333572 1.178999191 9.494905726 0.647912712 2.478768137 348.5309447 400143.4257 2.483301558 0.644586267 5.22E-09 8.282285344 8.315906536 HVEEFSPR ddPTM_A459_MK2206_30min_R1 2 HVEEFSPR 8 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 0 ; 182.69 0.00025578 11633000 3871 4164.7 4289.3 3269.2 4879.4 4033.6 4165 3691.5 3586.8 3400.1 FALSE TRUE 3541.751123 3893.577273 3998.154267 3520.99435 4685.043166 4261.978946 3887.160449 3659.225605 3959.660695 3821.330057 0.926837271 1.018906301 1.046272949 0.921405452 1.22602421 1.115312962 1.017227089 0.95757905 1.036199605 1 11.89985916 -2.094319784 18.60884481 1.030550724 0.204794758 0 0.08655294 0 0 0.020528139 0 0.008047856 2.094319784 -0.825755966 HVEEFSPR ddPTM_A459_MK2206_30min_R2 2 HVEEFSPR 8 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 0 ; 156.51 0.00080268 5765100 15151.6 20599 22324 24318 19838.4 25885.7 24308 17411.5 20783 18795 FALSE TRUE 16311.61815 19576.08361 23068.27102 22331.14161 19059.44474 26870.79845 21116.3304 19687.24283 22590.66777 18181.72069 0.897143809 1.076690372 1.268761709 1.228219374 1.048275081 1.47790184 1.1614044 1.082804162 1.24249339 1 14.15020112 -4.899350648 3.049771418 1.19707123 0.884245358 0.328288034 0.127779524 0.332411746 5.275876826 0.031989993 0.220575789 1.26E-05 4.899350648 -0.312825872 HVEVSQAPLPPAPAYLS(ph)SPLALPSQR ddPTM_A459_MK2206_30min_R2 2 HVEVSQAPLPPAPAYLSSPLALPSQR 26 0 A0A087X0G7;A0A087WUW6;A0A087X1B1;Q9Y6K9-3;Q9Y6K9;Q9Y6K9-2 A0A087X0G7 IKBKG NF-kappa-B essential modulator 1 HVEVSQAPLPPAPAY(0.13)LS(0.433)S(0.433)PLALPS(0.003)QR;HVEVSQAPLPPAPAY(0.123)LS(0.378)S(0.378)PLALPS(0.121)QR 97.388 2.17E-06 26415000 19142.5 20830 17333.3 21025.7 18679.6 19080.5 21533.8 14780.6 17231.8 16324.5 TRUE FALSE 20608.06452 19795.61249 17911.18357 19307.83305 17946.14505 19806.6218 18706.38619 16712.47517 18730.59082 15791.8329 1.304982433 1.253534825 1.13420549 1.222646742 1.136419386 1.254231977 1.184560799 1.058298633 1.186093529 1 13.94689101 -14.52287875 0.036111985 7.84E-09 1.800752914 0.596821566 0.056508109 730.7369921 1.970288631 83.79341515 28.19579198 3.00E-15 14.52287875 1.800752906 HVFGESDELIGQK ddPTM_A459_MK2206_30min_R1 2 HVFGESDELIGQK 13 0 P60174;P60174-3;P60174-4;U3KPZ0;U3KQF3;U3KPS5 P60174 TPI1 Triosephosphate isomerase 0 ; 139.32 0.0013219 36204000 14637.2 13198 13897.3 11894.4 16357.7 15595.7 16693.5 14439.5 13029.5 11366.8 FALSE TRUE 13392.22928 12338.8078 12953.99 12810.50875 15706.13817 16478.71506 15579.90707 14313.25697 14383.96315 12775.005 1.048314993 0.965855419 1.014010562 1.002779157 1.22944282 1.289918482 1.21956172 1.120411066 1.125945794 1 13.64103624 -6.251262937 24.01987811 1.179286545 1.005196146 0.495891638 0.076369405 326.3885506 770387.0329 0.02310862 0.029465786 5.61E-07 6.251262937 -0.174090399 HVFGESDELIGQK ddPTM_A459_MK2206_30min_R2 4 HVFGESDELIGQK 13 0 P60174;P60174-3;P60174-4;U3KPZ0;U3KQF3;U3KPS5 P60174 TPI1 Triosephosphate isomerase 0 ;;; 163.46 0.00051005 46912400 493966 713540 614046 694329 746150 621805 759170 627071 607214 546730 FALSE TRUE 531784.4168 678106.6412 634517.9872 637600.0997 716852.4019 645468.225 659490.0671 709031.3328 660028.3761 528890.2449 1.00547216 1.282131118 1.199715807 1.205543316 1.355389722 1.220419986 1.246931804 1.340602024 1.247949612 1 19.01260884 -4.756138003 24.98402874 1.245770407 1.00547178 0.341806118 0.093339501 170.672288 804247.0062 0.021468593 0.1780862 1.75E-05 4.756138003 -0.240298626 HVINFDLPSDIEEYVHR ddPTM_A459_MK2206_30min_R1 2 HVINFDLPSDIEEYVHR 17 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;F6S8Q4;A0A0D9SFB3;A0A2R8Y7T2;O15523;O15523-2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 0 ; 182.57 3.89E-08 23319000 9069.6 9229.2 9766.4 8283.4 10187 9163.5 10150.9 9235.8 8676.4 7861.6 FALSE TRUE 8298.182894 8628.377403 9103.483979 8921.388903 9781.230219 9682.329451 9473.751982 9155.052374 9578.342829 8835.55436 0.939180787 0.976551901 1.03032403 1.009714675 1.107030733 1.095837234 1.072230626 1.036160494 1.084068123 1 13.10910494 -5.253251479 1.120977415 1.06683105 0.925327949 0.617357465 0.032242458 0.550442363 0.962769668 0.010740823 0.076156401 5.58E-06 5.253251479 -0.141503101 HVIPMNPNTDDLFK ddPTM_A459_MK2206_30min_R1 1 HVIPMNPNTDDLFK 14 0 A0A0A0MSQ0;P13797-3;P13797-2;P13797;U3KQI3 A0A0A0MSQ0 PLS3 Plastin-3 0 105.65 0.015106 0 5919 5640.1 5796 5430.3 7578.6 5976.6 6492.3 5958.6 5130.4 4711 FALSE TRUE 5415.557968 5272.928465 5402.583669 5848.542647 7276.728314 6314.989927 6059.210513 5906.504588 5663.723439 5294.634246 1.022838919 0.995900419 1.020388457 1.104616934 1.374359016 1.192715046 1.14440587 1.115564232 1.069710045 1 12.37031531 -5.868976751 4.282281115 1.163209648 1.0113308 0.294775709 0.091987679 0.253598927 8.248730418 0.027470353 0.0423817 1.35E-06 5.868976751 -0.151878848 HVLS(ph)DLEDDEVR ddPTM_A459_MK2206_30min_R1 2 HVLSDLEDDEVR 12 0 H0YDJ4;H9KV85;E9PN67;C9J066;Q8N4C6-4;Q8N4C6-9;Q8N4C6-2;Q8N4C6;Q8N4C6-5;Q8N4C6-10;Q8N4C6-7 H0YDJ4 NIN Ninein 1 HVLS(1)DLEDDEVR;HVLS(1)DLEDDEVR 136.01 0.0014423 2898000 1359.94 1285.52 1377.98 1259.91 1174.63 1244.19 1583.18 1089.72 1342.86 1496.34 TRUE FALSE 1244.269962 1201.832414 1284.446557 1356.948487 1127.842 1314.634963 1477.568951 1080.192693 1482.455102 1681.717896 0.739880312 0.714645671 0.763770523 0.806882349 0.670648747 0.781721456 0.878606902 0.642315037 0.881512355 1 10.71572 -12.72259355 0.23601348 1.519116502 0.730163886 0.528747862 0.070534741 49.83626298 1.063632059 12.75244633 0.115502491 1.89E-13 12.72259355 -0.788952615 HVLS(ph)DLEDDEVR ddPTM_A459_MK2206_30min_R2 1 HVLSDLEDDEVR 12 0 H0YDJ4;H9KV85;E9PN67;C9J066;Q8N4C6-4;Q8N4C6-9;Q8N4C6-2;Q8N4C6;Q8N4C6-5;Q8N4C6-10;Q8N4C6-7 H0YDJ4 NIN Ninein 1 HVLS(1)DLEDDEVR 84.365 0.044372 0 7591.5 8091.2 6250.5 7550 7215 9033.4 7524.5 5853.9 6252 6820.6 TRUE FALSE 8172.711077 7689.402774 6458.88855 6933.140849 6931.702848 9377.172367 6536.524111 6619.024829 6795.787659 6598.044381 1.238656578 1.165406343 0.978909534 1.050787241 1.050569297 1.421204803 0.990675984 1.003179798 1.029969983 1 12.68782277 HVLTGSADNSCR ddPTM_A459_MK2206_30min_R1 2 HVLTGSADNSCR 12 0 Q13347;Q5TFK1 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I 0 ; 182.41 0.00014558 6904800 1680.12 1435 1902.02 1430.53 1804.96 1889.96 2139.1 1695.23 1123.39 1368.52 FALSE TRUE 1537.216971 1341.581239 1772.916182 1540.709668 1733.064621 1996.967902 1996.404542 1680.408783 1240.170411 1538.062589 0.999450206 0.872253996 1.152694431 1.001721048 1.126784198 1.298365824 1.297999546 1.092549025 0.806319859 1 10.5868985 -5.26610806 24.68482696 1.112382911 0.935852097 0.16707439 0.140680129 510.3564143 2698437.102 0.038901773 0.085574111 5.42E-06 5.26610806 -0.176530814 HVLTGSADNSCR ddPTM_A459_MK2206_30min_R2 2 HVLTGSADNSCR 12 0 Q13347;Q5TFK1 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I 0 ; 114.87 0.0075815 4862400 10719.4 12262.5 13101.7 13598.2 10795.8 11603.5 13331.9 13304 14526 13203 FALSE TRUE 11540.08551 11653.56208 13538.50414 12487.18356 10371.90265 12045.07932 11581.40552 15042.87848 15789.44522 12772.18719 0.903532444 0.912417107 1.059998882 0.977685605 0.81206942 0.943070998 0.906767599 1.17778406 1.236236596 1 13.64071798 -7.761981323 24.9999999 1.155257796 0.932764147 0.574900084 0.081236927 9.810643898 452484.2796 0.041727868 0.021957918 1.73E-08 7.761981323 -0.222493649 HVLVTLGEK ddPTM_A459_MK2206_30min_R2 1 HVLVTLGEK 9 0 P60660-2;F8W1R7;G8JLA2;G3V1V0;P60660;J3KND3;B7Z6Z4;G3V1Y7;F8VPF3;F8VZU9;F8W180;F8VXL3;H0YI43 P60660-2 MYL6 Myosin light polypeptide 6 0 105.4 0.019348 3592200 50852 53749 52801 57728 61110 49855 58822 47485 48682 50038 FALSE TRUE 54745.26822 51079.90282 54561.35899 53011.43774 58710.51435 51752.26696 51098.60074 53691.45254 52916.27236 48405.26416 1.130977574 1.05525512 1.12717821 1.095158526 1.212895237 1.06914543 1.055641398 1.10920689 1.093192513 1 15.56287633 -9.860002054 0.432610992 0.978898733 1.113054763 0.3626852 0.043180382 8.018024944 1.547497473 0.308240149 0.026707219 1.38E-10 9.860002054 0.13415603 HVS(ph)PVTPPR ddPTM_A459_MK2206_30min_R1 4 HVSPVTPPR 9 0 Q13443 Q13443 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 1 HVS(1)PVTPPR;HVS(0.998)PVT(0.002)PPR;HVS(0.993)PVT(0.007)PPR;HVS(0.999)PVT(0.001)PPR 96.604 0.014113 22925000 6544.89 6159.72 5442.39 5162.45 7648.7 6837.66 8282.7 6986.08 7498 6789.49 TRUE FALSE 5988.212737 5758.721108 5072.97573 5560.062793 7344.036083 7224.8024 7730.176196 6925.001439 8277.443932 7630.623279 0.784760631 0.754685548 0.664818003 0.728651198 0.962442492 0.946816811 1.013046499 0.907527627 1.084766425 1 12.89758519 -6.27939132 5.073916936 0.98219726 0.728715258 0.851854335 0.051611784 0.066958293 5.236971215 0.015741041 0.018742685 5.26E-07 6.27939132 -0.253482002 HVS(ph)PVTPPR ddPTM_A459_MK2206_30min_R2 4 HVSPVTPPR 9 0 Q13443 Q13443 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 1 HVS(0.999)PVT(0.001)PPR;HVS(0.998)PVT(0.002)PPR;HVS(1)PVTPPR;HVS(1)PVTPPR 108.35 0.0079786 48159800 94265 93204 102116 106780 96271 111506 111800 78690 107684 90552 TRUE FALSE 101482.0009 88575.62489 105520.4965 98055.73243 92490.91682 115749.439 97120.5257 88975.05318 117050.1597 87597.29566 1.158506094 1.011168487 1.204609066 1.119392233 1.05586498 1.321381421 1.108716028 1.015728311 1.336230289 1 16.41859871 -4.460317013 22.63845794 1.132783508 1.829359336 0.004869806 0.116153906 1907.982958 1885368.495 0.026513046 115478.2229 3.46E-05 4.460317013 0.696575827 HVSPVT(ph)PPR ddPTM_A459_MK2206_30min_R2 2 HVSPVTPPR 9 0 Q13443 Q13443 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 1 HVS(0.007)PVT(0.993)PPR;HVSPVT(1)PPR 88.803 0.041636 5388700 20048.8 24319 19772.4 41117 33583 62376 43931 22766 49622 28531 TRUE FALSE 21583.75154 23111.35382 20431.60195 37757.60957 32264.36268 64749.76239 38162.80693 25741.59437 53938.03186 27600.03581 0.782018969 0.837366806 0.740274472 1.368027558 1.168997131 2.34600284 1.382708602 0.932665253 1.954273981 1 14.75238252 -5.880698907 2.381340236 1.49784581 0.778402293 0.356939905 0.40475473 0.321423393 3.704437752 0.123496964 0.207545891 1.32E-06 5.880698907 -0.719443516 HVTLGPGQS(ph)PLSR ddPTM_A459_MK2206_30min_R2 2 HVTLGPGQSPLSR 13 0 O15061 O15061 SYNM Synemin 1 HVTLGPGQS(0.5)PLS(0.5)R;HVTLGPGQS(1)PLSR 170.26 0.00023238 14879700 36920 54254 39351 55285 51959 49080 42504 31153 41143 35333 TRUE FALSE 39746.62359 51559.82525 40662.9427 50768.03865 49918.82859 50947.77379 36923.17374 35224.80406 44721.54377 34180.0871 1.162859049 1.508475537 1.189667615 1.485310394 1.460465225 1.490568869 1.080253939 1.030565076 1.308409298 1 15.06086845 -7.271063972 24.88076863 1.107354147 1.387998129 0.496057587 0.137243727 542.1934732 1401631.542 0.055140304 0.037696819 5.36E-08 7.271063972 0.280643982 HVTLPS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 HVTLPSSPR 9 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 HVTLPS(0.682)S(0.318)PR 101.71 0.011099 69922000 5411 3614.1 3991.1 3159.2 5020.7 5079.5 5444.1 4242.6 3775 3441.4 TRUE FALSE 4950.766036 3378.821433 3720.195252 3402.522131 4820.714887 5367.0969 5080.934022 4205.507395 4167.424759 3867.746613 1.280013023 0.873589139 0.96185082 0.879716918 1.246388497 1.387654735 1.313667758 1.087327536 1.077481328 1 11.91727757 -6.272544084 24.87197706 1.206310487 0.987210689 0.258960494 0.151715719 843.2291146 1888635.743 0.048290482 0.055274813 5.34E-07 6.272544084 -0.219099798 HVTLPSS(ph)PR ddPTM_A459_MK2206_30min_R1 4 HVTLPSSPR 9 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 HVTLPS(0.177)S(0.823)PR;HVTLPS(0.15)S(0.85)PR;HVT(0.007)LPS(0.223)S(0.77)PR;HVTLPS(0.463)S(0.537)PR 120.03 0.0044371 230795000 21623 15273.9 17361.1 12985.8 23677.9 21064.5 23505.9 18986.6 15512 16797.4 TRUE FALSE 19783.8503 14279.56633 16182.6769 13985.96857 22734.7591 22257.15379 21937.8643 18820.60216 17124.52791 18878.38873 1.047962863 0.756397516 0.857206467 0.740845459 1.204274339 1.178975288 1.162062325 0.99693901 0.907096901 1 14.20444802 -6.259049938 24.99439827 1.084301011 0.844345778 0.469546245 0.116454401 190.4962428 1992654.598 0.036484431 0.044895371 5.51E-07 6.259049938 -0.239955233 HVTLPSS(ph)PR ddPTM_A459_MK2206_30min_R2 5 HVTLPSSPR 9 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 HVTLPS(0.199)S(0.801)PR;HVTLPS(0.072)S(0.928)PR;HVTLPS(0.159)S(0.841)PR;HVTLPS(0.194)S(0.806)PR;HVTLPS(0.227)S(0.773)PR 122.55 0.0039092 310788000 281547 382139 311390 473047 431631 654030 420967 347272 441019 315142 TRUE FALSE 303102.4548 363162.5329 321771.5872 434397.5469 414682.9982 678919.57 365693.5272 392661.6428 479378.0354 304858.9423 0.99423836 1.191247762 1.055476952 1.424913252 1.360245479 2.226995753 1.199549944 1.288010907 1.572458501 1 18.21778234 -5.816583786 4.615196989 1.475066835 1.089765778 0.216618149 0.307665361 0.300019876 13.10454208 0.088088931 0.137851061 1.53E-06 5.816583786 -0.385301057 HVVFIAQR ddPTM_A459_MK2206_30min_R1 2 HVVFIAQR 8 0 P62081;B5MCP9;A0A2R8Y623 P62081 RPS7 40S ribosomal protein S7 0 ; 128.86 0.006861 7998400 8865.4 8764.1 8806.6 7591 8510.1 7587.8 8626.2 8127.3 6967.6 7124.9 FALSE TRUE 8111.351176 8193.555497 8208.832529 8175.660135 8171.124697 8017.414679 8050.761937 8056.243873 7691.906954 8007.586402 1.012958308 1.023224113 1.025131933 1.020989312 1.02042292 1.001227371 1.005391829 1.006076422 0.960577453 1 12.96715174 -7.436883547 0.989559389 0.984752471 1.021109295 0.578898022 0.011681675 0.386631106 0.709556429 0.008986812 0.004480132 3.66E-08 7.436883547 0.036356825 HVVFIAQR ddPTM_A459_MK2206_30min_R2 1 HVVFIAQR 8 0 P62081;B5MCP9;A0A2R8Y623 P62081 RPS7 40S ribosomal protein S7 0 130.77 0.0069345 0 26544 40713 34106 40072 37197 36087 36453 24676 32850 29841 FALSE TRUE 28576.22905 38691.25162 35243.07702 36797.98942 35736.45888 37460.31607 31666.67731 27901.23793 35707.23362 28867.29061 0.989917254 1.340314619 1.220865425 1.274729586 1.237956806 1.297673432 1.096974348 0.966534695 1.236944405 1 14.81714809 -7.375642185 5.837919217 1.068537703 1.234045462 0.315095842 0.109754209 0.265833599 11.88287565 0.044212048 0.02946239 4.21E-08 7.375642185 0.165507759 HWDQDDDFEFTGSHLTVR ddPTM_A459_MK2206_30min_R1 1 HWDQDDDFEFTGSHLTVR 18 0 R4GMQ1;O60341;O60341-2 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 0 92.236 0.0028584 3175800 579.29 450.88 480.7 343.69 521.33 509.47 652.03 465.89 463.51 331.98 FALSE TRUE 530.0183435 421.52763 448.0714233 370.1610634 500.5643222 538.3157511 608.5342684 461.8167728 511.6935232 373.1081887 1.420548676 1.129773194 1.200915544 0.992101151 1.341606369 1.442787286 1.630986097 1.237755661 1.371434717 1 8.543450214 -6.49276704 23.86016188 1.372334844 1.180900687 0.130398817 0.180194522 631.8851974 500698.4077 0.054750066 0.061975842 3.22E-07 6.49276704 -0.191434158 HWDQNER ddPTM_A459_MK2206_30min_R2 5 HWDQNER 7 0 F5GZS6;J3KPF3;P08195-2;P08195-3;P08195;P08195-4;F5GZI0 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 ;;;; 132.08 0.0052155 135302300 97489.1 68167.1 65059.9 58507.3 71710.3 67333.1 85010.1 45963.7 90720.2 69992.4 FALSE TRUE 104952.9405 64782.02094 67228.96459 53727.06643 68894.59331 69895.5083 73848.17175 51971.31341 98610.87901 67708.55372 1.550069152 0.956777503 0.992916861 0.79350486 1.017516835 1.032299532 1.09067714 0.767573823 1.456402088 1 16.04705048 -4.758663816 24.97916072 1.000546694 1.550069896 0.450577761 0.177859733 64.97114029 584606.5752 0.041368358 0.278042303 1.74E-05 4.758663816 0.549523202 HWILPQDYDHAQAEAR ddPTM_A459_MK2206_30min_R2 2 HWILPQDYDHAQAEAR 16 0 Q15293;Q15293-2 Q15293 RCN1 Reticulocalbin-1 0 ; 81.327 0.012272 10368500 30905 35698 33662 33151 34958 30733.6 38686 21743.9 27255.6 27201.7 FALSE TRUE 33271.11056 33925.28923 34784.27428 30442.45726 33585.37327 31903.18868 33606.48173 24585.90239 29626.24282 26314.11076 1.264382858 1.289243233 1.321886747 1.156887175 1.276325603 1.21239851 1.277127775 0.934323892 1.125869048 1 14.68354902 -7.751179206 24.99993757 1.022572349 1.255826836 0.760570914 0.06088541 89.73810214 218657.2485 0.027742336 0.015787609 1.77E-08 7.751179206 0.233254487 HWPFMVVNDAGRPK ddPTM_A459_MK2206_30min_R1 2 HWPFMVVNDAGRPK 14 1 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PNE6;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ; 115.92 0.0021715 16336300 14648.7 16125.2 15805.1 15648.3 15008.9 13980.9 15136.5 14855.4 12723.7 11403.5 FALSE TRUE 13402.75114 15075.44655 14732.29385 16853.53478 14411.06373 14772.48648 14126.7717 14725.5208 14046.37415 12816.25167 1.045762169 1.176275789 1.149500979 1.315012783 1.1244367 1.152637047 1.102254549 1.148972506 1.095981454 1 13.64568676 -8.767136794 0.645807935 0.998254585 1.165864747 0.350858497 0.064236617 1.270852435 1.099841179 0.070141331 0.026731112 1.71E-09 8.767136794 0.167610161 HWPFQVINDGDKPK ddPTM_A459_MK2206_30min_R1 2 HWPFQVINDGDKPK 14 1 A0A0G2JIW1;P0DMV9;P0DMV8 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 83.53 0.021978 31309000 20405.6 22841 23250 21491 19717.4 17385.2 21018 21338 21341 20534 FALSE TRUE 18669.99657 21354.04675 21671.85478 23146.24054 18932.01421 18369.535 19615.92757 21151.44412 23559.47332 23077.90694 0.808998693 0.925302576 0.93907367 1.002960996 0.820352307 0.795979247 0.849987289 0.916523503 1.020866987 1 14.49422476 -8.144959922 3.795828226 1.010360377 0.881303598 0.419665017 0.061397098 0.262947832 6.430258893 0.052645608 0.017690186 7.16E-09 8.144959922 -0.129056779 HWVAPGGPYSAETPGVPS(ph)PIAALK ddPTM_A459_MK2206_30min_R1 2 HWVAPGGPYSAETPGVPSPIAALK 24 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 HWVAPGGPYSAET(0.002)PGVPS(0.997)PIAALK;HWVAPGGPYSAET(0.001)PGVPS(0.999)PIAALK 142.45 1.64E-08 137165000 25273 22588 20594.3 19169.1 21245 19080.3 20773 18981 16956.1 16138 TRUE FALSE 23123.39864 21117.51709 19196.4163 20645.5074 20398.76666 20160.6101 19387.27107 18815.05112 18718.74727 18137.29728 1.27490873 1.164314439 1.058394534 1.138290181 1.124686129 1.111555365 1.068917313 1.037367962 1.032058249 1 14.14667187 -1.522878745 0.236517288 1.014247212 2.299388595 0.762930696 0.037133238 28.05331439 0.3722582 0.057082822 14.08365593 0.03 1.522878745 1.285141383 HWVAPGGPYSAETPGVPS(ph)PIAALK ddPTM_A459_MK2206_30min_R2 2 HWVAPGGPYSAETPGVPSPIAALK 24 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 HWVAPGGPYSAETPGVPS(1)PIAALK;HWVAPGGPYSAETPGVPS(1)PIAALK 106.49 3.79E-07 50881000 178923 193640 168899 198573 190399 168823 212833 151442 149469 155492 TRUE FALSE 192621.4824 184024.1192 174530.0084 182348.9507 182922.9786 175247.6776 184887.7714 171235.9894 162469.5434 150418.3088 1.280572053 1.223415691 1.160297638 1.212278958 1.216095169 1.165068794 1.229157361 1.138398582 1.080118137 1 17.19862066 -8.312735015 1.290789692 1.000800187 1.211371136 0.820601462 0.032967741 0.171452457 0.579197635 0.031450426 0.009892377 4.87E-09 8.312735015 0.210570949 HY(ph)CKS(ph)IS(ph)SRRR ddPTM_A459_MK2206_30min_R1 1 HYCKSISSRRR 11 3 P36894 P36894 BMPR1A Bone morphogenetic protein receptor type-1A 3 HY(1)CKS(1)IS(0.547)S(0.453)RRR 64.55 0.034782 21056000 3973.4 4200 4261.6 3474.7 3977.6 3319.9 4190.1 4468.4 3391.2 3424.2 TRUE FALSE 3635.441465 3926.579237 3972.334465 3742.321996 3819.163769 3507.869869 3910.586074 4429.33325 3743.727376 3848.415747 0.944659232 1.020310563 1.03219993 0.972431837 0.992398956 0.911510112 1.016154784 1.150949778 0.972797021 1 11.91004895 -7.524533133 24.9944282 1.053834493 0.981897416 0.202701568 0.054261819 74.41166221 1124141.044 0.024482649 0.014267025 2.99E-08 7.524533133 -0.071937077 HYCDSEKPR ddPTM_A459_MK2206_30min_R2 1 HYCDSEKPR 9 1 H7BYK1;Q9UGI8-2;Q9UGI8 H7BYK1 TES Testin 0 88.177 0.025121 2006200 9533.1 9968.3 9405.9 9597.8 10583 7173.8 9349.7 14169 13041 8079 FALSE TRUE 10262.96147 9473.288717 9719.488011 8813.629038 10167.45824 7446.803986 8122.073159 16020.93695 14175.28261 7815.382892 1.313174493 1.212133666 1.243635551 1.127728374 1.30095459 0.952839303 1.039241874 2.049923487 1.813766875 1 12.93210084 -7.746003543 24.99246664 1.698883981 1.169477453 0.357598076 0.271248336 201.5165713 326280.5278 0.122666373 0.070492561 1.79E-08 7.746003543 -0.529406528 HYCESLRPR ddPTM_A459_MK2206_30min_R1 1 HYCESLRPR 9 1 B4DEY6;Q9NZU5-2;Q9NZU5 B4DEY6 LMCD1 LIM and cysteine-rich domains protein 1 0 111.17 0.0083066 3388500 321.92 309.64 294.4 234.79 256.27 273.95 284.66 191.76 143.44 218.26 FALSE TRUE 294.5390135 289.4823797 274.4169482 252.8735665 246.0622232 289.4608123 265.6708508 190.0834625 158.3511013 245.2996966 1.200731259 1.180117154 1.118700724 1.030875986 1.003108551 1.180029231 1.083045982 0.774902966 0.645541366 1 7.938401639 -7.741370783 5.89903889 0.780799975 1.113090341 0.657442811 0.101153175 0.092047131 10.30434255 0.050889909 0.027356604 1.81E-08 7.741370783 0.332290366 HYEAEHEYYER ddPTM_A459_MK2206_30min_R1 1 HYEAEHEYYER 11 0 A0A096LPB0;Q7L775 A0A096LPB0 EPM2AIP1 EPM2A-interacting protein 1 0 117.14 0.0032071 2056500 341.27 316.83 490.31 419.58 552.49 606.34 533.45 427.76 306.21 243.32 FALSE TRUE 312.2431944 296.2043094 457.0291233 451.8961243 530.4831534 640.6704468 497.8645238 424.0201394 338.0416253 273.4643186 1.141805981 1.083155239 1.671256878 1.652486608 1.939862415 2.342793569 1.820583126 1.550550147 1.236145275 1 8.095208793 -5.282451691 5.714212899 1.714454933 1.108850915 0.260969681 0.350691241 0.194517936 22.79949809 0.09556099 0.217664429 5.22E-06 5.282451691 -0.605604018 HYEDGYPGGSDNYGS(ph)LSR ddPTM_A459_MK2206_30min_R1 4 HYEDGYPGGSDNYGSLSR 18 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 HYEDGYPGGSDNYGS(0.999)LS(0.001)R;HYEDGYPGGSDNYGS(0.954)LS(0.046)R;HYEDGYPGGSDNY(0.001)GS(0.983)LS(0.016)R;HYEDGYPGGSDNYGS(1)LSR 254.02 2.32E-33 196977000 21366.99 17543.78 14230.14 11700.64 17542.09 16071.8 13932.79 12504.97 11405.59 9879.45 TRUE FALSE 19549.6153 16401.67673 13264.23774 12601.82532 16843.35141 16981.77143 13003.359 12395.64037 12591.2419 11103.39085 1.760688744 1.477177283 1.194611441 1.134952871 1.516955643 1.529422107 1.171116029 1.116383322 1.1339997 1 13.43871271 -1.522878745 0.146041067 0.951513302 3.24028336 0.514373852 0.163346269 71.72607634 0.693606439 0.70775923 34.55803477 0.03 1.522878745 2.288770058 HYEDGYPGGSDNYGS(ph)LSR ddPTM_A459_MK2206_30min_R2 4 HYEDGYPGGSDNYGSLSR 18 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 HYEDGYPGGSDNY(0.003)GS(0.848)LS(0.148)R;HYEDGYPGGSDNYGS(0.994)LS(0.006)R;HYEDGYPGGSDNYGS(0.999)LS(0.001)R;HYEDGYPGGSDNYGS(0.995)LS(0.005)R 181.86 1.02E-09 124422000 177689 236513 165396 213880 176152 186942 156577 126289 154147 117925 TRUE FALSE 191293.0065 224768.1083 170910.2201 196405.3198 169235.3874 194056.2088 136018.2518 142795.4059 167554.4274 114077.1169 1.676874483 1.970317224 1.498198979 1.721689022 1.483517396 1.701096715 1.192335987 1.25174452 1.468782101 1 16.7996499 -6.903900929 0.213715368 0.908277803 2.086272644 0.660237361 0.159576156 2.574698025 0.307168059 0.449848459 0.980669032 1.25E-07 6.903900929 1.17799484 HYELYR ddPTM_A459_MK2206_30min_R1 4 HYELYR 6 0 E7EW69;E7EX04;B5ME97;Q9P0V9;Q9P0V9-2;H0Y961;D6RDU5;B1AMS2;Q92599-3;Q14141-2;Q14141-4;Q9P0V9-3;Q14141;Q9NVA2-2;A0A087X142;A6NMH6;A6NFQ9;F8W8I8;Q92599-2;Q92599-4;Q92599;D6RGI3;D6RER5;Q9NVA2 E7EW69;A0A087X142;D6RGI3 SEPT10;SEPT11;SEPT6;SEPT8 Septin-10;Septin-8;Septin-6;Septin-11 0 ;;; 146.66 0.013124 22296700 3122.35 2747.86 2861.46 2569.99 3426.04 2856.19 2861.89 2868.91 2602.06 2563.43 FALSE TRUE 2856.777736 2568.973815 2667.232068 2767.931075 3289.573572 3017.90501 2670.97854 2843.827422 2872.553449 2881.007061 0.991589981 0.891692995 0.925798518 0.960751229 1.141813783 1.047517394 0.927098922 0.987094916 0.997065744 1 11.49235748 -6.01275284 24.82351517 1.016638568 0.933790581 0.303770101 0.055990446 722.9053284 1407145.274 0.017515189 0.02382268 9.71E-07 6.01275284 -0.082847987 HYELYR ddPTM_A459_MK2206_30min_R2 4 HYELYR 6 0 E7EW69;E7EX04;B5ME97;Q9P0V9;Q9P0V9-2;H0Y961;D6RDU5;B1AMS2;Q92599-3;Q14141-2;Q14141-4;Q9P0V9-3;Q14141;Q9NVA2-2;A0A087X142;A6NMH6;A6NFQ9;F8W8I8;Q92599-2;Q92599-4;Q92599;D6RGI3;D6RER5;Q9NVA2 E7EW69;A0A087X142;D6RGI3 SEPT10;SEPT11;SEPT6;SEPT8 Septin-10;Septin-8;Septin-6;Septin-11 0 ;;; 155.81 7.55E-09 25254200 20980.2 23590.6 22371.9 26070.3 24684.9 21348.3 22783.3 19036.3 22493.6 20150 FALSE TRUE 22586.46024 22419.12511 23117.76798 23940.2731 23715.64679 22160.72452 19791.82534 21524.40977 24450.05267 19492.50715 1.158725251 1.150140664 1.185982275 1.228178238 1.216654513 1.136884257 1.015355551 1.104240189 1.25433083 1 14.25063204 -6.985824111 9.031818695 1.098457988 1.186956154 0.302398551 0.067576115 0.263275102 140.9013215 0.024492443 0.021244869 1.03E-07 6.985824111 0.088498166 HYGDQVDR ddPTM_A459_MK2206_30min_R1 4 HYGDQVDR 8 0 E7ES68;G5E9D5;Q9BQ52-2;Q9BQ52;Q9BQ52-4;Q9BQ52-3 E7ES68;Q9BQ52-3 ELAC2 Zinc phosphodiesterase ELAC protein 2 0 ;;; 143.73 0.0029967 7846300 2256.3 2058.15 2020.12 1771.33 2024.72 1978.28 2568.23 2557.3 829.52 1665.24 FALSE TRUE 2064.389837 1924.164061 1882.999883 1907.758144 1944.071115 2090.288504 2396.908063 2534.941796 915.7515725 1871.542503 1.10304192 1.028116678 1.006121891 1.019350691 1.038753388 1.11688006 1.280712599 1.354466592 0.489303113 1 10.8700121 -8.260305193 24.99989105 0.744651574 1.111075556 0.471514108 0.15813327 88.02649925 1940409.742 0.123120719 0.04055928 5.49E-09 8.260305193 0.366423981 HYGDQVDR ddPTM_A459_MK2206_30min_R2 3 HYGDQVDR 8 0 E7ES68;G5E9D5;Q9BQ52-2;Q9BQ52;Q9BQ52-4;Q9BQ52-3 E7ES68;Q9BQ52-3 ELAC2 Zinc phosphodiesterase ELAC protein 2 0 ;; 131.06 0.0051472 10688400 6481.3 7544 6604.7 5500.93 8361.8 10536.2 8734.94 5632.2 9202.5 4968.3 FALSE TRUE 6977.513311 7169.37593 6824.897402 5051.486422 8033.473717 10937.16247 7588.031885 6368.347878 10002.91682 4806.184778 1.451777997 1.491697939 1.420023931 1.051038746 1.671486655 2.275643359 1.578805692 1.325031844 2.08125931 1 12.2306764 -6.480959731 23.86853389 1.701843753 1.367366221 0.14147866 0.353317423 524.8348387 298838.6093 0.10807679 0.122532048 3.30E-07 6.480959731 -0.334477532 HYGGLTGLNK ddPTM_A459_MK2206_30min_R1 1 HYGGLTGLNK 10 0 P18669;Q8N0Y7;P15259 P18669 PGAM1;PGAM4;PGAM2 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4;Phosphoglycerate mutase 2 0 111.06 0.012756 10059000 7135 6789.6 6770.2 6310.8 7279.5 6608.4 7383.8 6583.7 5802.2 5682.2 FALSE TRUE 6528.130783 6347.595806 6310.657687 6796.858909 6989.5421 6982.561897 6891.240175 6526.139405 6405.359453 6386.153834 1.022231996 0.993962246 0.988178151 1.064311804 1.094483829 1.093390807 1.079090851 1.021920169 1.003007384 1 12.64073159 -2.967142956 18.56104096 1.039363044 1.009818209 0 0.040383258 0 0 0.010430477 0 0.001078592 2.967142956 -0.029544835 HYGGLTGLNK ddPTM_A459_MK2206_30min_R2 2 HYGGLTGLNK 10 0 P18669;Q8N0Y7;P15259 P18669 PGAM1;PGAM4;PGAM2 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4;Phosphoglycerate mutase 2 0 ; 140.11 0.0020425 12350900 132208 169789 148629 170750 175207 166186 185908 142212 142030 164651 FALSE TRUE 142329.9461 161357.5252 153584.2167 156799.1788 168327.4928 172510.3247 161498.0563 160799.5967 154383.5127 159278.4514 0.893591976 1.013053076 0.964249811 0.98443435 1.056812716 1.083073845 1.013935375 1.009550227 0.969268042 1 17.28119157 -3.565336519 0.937143751 1.018690468 4.10E-12 0.47805361 0.035655907 16.06028579 1.875664355 0.012662068 27.91028684 0.000272059 3.565336519 -1.018690468 HYGIT(ph)SPISLAAPK ddPTM_A459_MK2206_30min_R2 1 HYGITSPISLAAPK 14 0 P51003;G3XAH6;G3V457;G3V3I9;A0A0C4DGK1;P51003-2 P51003 PAPOLA Poly(A) polymerase alpha 1 HYGIT(0.632)S(0.368)PISLAAPK 234.04 2.20E-13 40237000 63288 73989 65819 73852 78022 59804 87985 60735 63565 51915 TRUE FALSE 68133.37794 70314.81385 68013.37261 67818.05536 74958.46425 62079.88313 76432.46381 68673.27303 69093.7688 50221.0178 1.356670592 1.400107304 1.354281048 1.350391894 1.492571587 1.236133512 1.52192184 1.367420973 1.375793877 1 15.61600365 -9.146975145 2.363193532 1.000000747 1.38594034 0.703419564 0.074807994 9.444280233 34.96954385 0.06687041 0.018104592 7.13E-10 9.146975145 0.385939593 HYGITS(ph)PISLAAPK ddPTM_A459_MK2206_30min_R1 1 HYGITSPISLAAPK 14 0 P51003;G3XAH6;G3V457;G3V3I9;A0A0C4DGK1;P51003-2 P51003 PAPOLA Poly(A) polymerase alpha 1 HYGIT(0.031)S(0.968)PIS(0.001)LAAPK 120.59 0.0020444 40568000 9195 8709.1 9226.4 7448.9 8490.6 8235.6 8735.5 8841.1 8571.4 7002.8 TRUE FALSE 8412.916965 8142.136007 8600.137674 8022.615569 8152.401423 8701.892555 8152.770734 8763.803195 9462.427703 7870.359732 1.068936777 1.03453162 1.092724852 1.019345474 1.035835934 1.105653725 1.035882858 1.113520029 1.202286557 1 12.94221386 -7.810649202 8.369702261 1.118885592 1.056442576 0.140185987 0.052641933 0.411342227 62.46809402 0.027007533 0.012999687 1.55E-08 7.810649202 -0.062443016 HYGITS(ph)PISLAAPK ddPTM_A459_MK2206_30min_R2 1 HYGITSPISLAAPK 14 0 P51003;G3XAH6;G3V457;G3V3I9;A0A0C4DGK1;P51003-2 P51003 PAPOLA Poly(A) polymerase alpha 1 HYGIT(0.041)S(0.959)PISLAAPK 111.72 0.0038427 45036000 93050 112100 98877 108880 109190 100010 116810 98036 87343 73803 TRUE FALSE 100173.9795 106533.277 102173.5098 99984.15571 104902.652 103815.9506 101472.7067 110849.6418 94939.93626 71394.81415 1.403098821 1.492171081 1.431105481 1.40044003 1.469331536 1.454110524 1.421289598 1.552628761 1.329787568 1 16.12353167 -8.594571244 6.053243796 1.000009109 1.451014847 0.909949244 0.043036178 0.191144443 15.88961225 0.039426309 0.010217359 2.54E-09 8.594571244 0.451005738 HYGITS(ph)PISLASPK ddPTM_A459_MK2206_30min_R2 1 HYGITSPISLASPK 14 0 Q9BWT3-2;Q9BWT3;H7C3W0 Q9BWT3-2 PAPOLG Poly(A) polymerase gamma 1 HYGIT(0.031)S(0.966)PIS(0.003)LASPK 190.24 0.00010098 4188900 27843 30968 28839 31517 32404 26501 36607 24577 25129 23944 TRUE FALSE 29974.68149 29430.17415 29800.47787 28941.96028 31131.65614 27509.51413 31800.45693 27789.29829 27314.675 23162.70924 1.294092206 1.270584276 1.28657134 1.249506695 1.34404209 1.187663923 1.372916121 1.199743001 1.179252164 1 14.49951639 -8.607709542 1.320158423 1.001660162 1.282486224 0.73801591 0.051245165 0.251975971 0.940194014 0.044678779 0.013509933 2.47E-09 8.607709542 0.280826062 HYNGEAYEDDEHHPR ddPTM_A459_MK2206_30min_R1 5 HYNGEAYEDDEHHPR 15 0 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 0 ;;;; 306.44 1.79E-80 121958600 5900.03 4729.44 6140.58 5625.91 6719.87 6200.44 7015.78 5365.49 4288.92 4203.12 FALSE TRUE 5398.201466 4421.552596 5723.774538 6059.218563 6452.203348 6551.503554 6547.770117 5318.580087 4734.768582 4723.834238 1.142758445 0.936009262 1.211679803 1.282690767 1.365882676 1.386903779 1.386113438 1.1259032 1.002314718 1 12.20574263 -3.715887798 15.19534578 1.200443089 1.156949751 0 0.161784892 0 0 0.040261358 0 0.000192359 3.715887798 -0.043493338 HYNGEAYEDDEHHPR ddPTM_A459_MK2206_30min_R2 3 HYNGEAYEDDEHHPR 15 0 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 0 ;; 136.57 0.00056927 85637500 88373 117958 99971 108179 148321 114696 109073 62328 77880 39387.3 FALSE TRUE 95138.90483 112100.3772 103303.9832 99340.42965 142497.1723 119060.8367 94751.58408 70474.4836 84653.86163 38102.09563 2.496946776 2.942105294 2.711241509 2.607216953 3.739877556 3.124784469 2.486781436 1.849622244 2.221763927 1 15.21758273 -8.266242342 0.911644391 1.102299688 2.937136149 0.683991882 0.39456746 0.325506686 0.570977995 0.395411352 0.142671261 5.42E-09 8.266242342 1.83483646 HYQGEEKS(ph)D ddPTM_A459_MK2206_30min_R2 2 HYQGEEKSD 9 1 P13984 P13984 GTF2F2 General transcription factor IIF subunit 2 1 HYQGEEKS(1)D;HYQGEEKS(1)D 80.312 0.025697 9079100 26220 16713.3 18553.2 21840 25486 19025.3 26937 137101 41189 24853 TRUE FALSE 28227.42336 15883.34183 19171.75443 20055.60214 24485.29158 19749.32112 23400.13954 155020.5714 44771.54477 24042.04865 1.17408561 0.660648436 0.797425989 0.834188568 1.018436155 0.821449179 0.973300566 6.447893594 1.862218375 1 14.55327221 -7.578964742 24.99999767 3.435163959 0.875990375 0.359345329 1.328425362 74.33375738 33132.85223 0.571232031 0.329800978 2.64E-08 7.578964742 -2.559173584 HYS(ph)DHWEDER ddPTM_A459_MK2206_30min_R2 1 HYSDHWEDER 10 0 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 HY(0.001)S(0.999)DHWEDER 101.56 0.010737 5632100 47940 29353 38916 40464 34004 26958 45874 37373 28686 38263 TRUE FALSE 51610.32326 27895.3727 40213.44002 37157.96176 32668.8321 27983.90558 39850.6887 42257.77942 31181.05643 37014.48144 1.394327875 0.753634027 1.086424514 1.003876329 0.882595969 0.756025871 1.07662426 1.141655314 0.842401547 1 15.1758022 -4.744096772 24.91441277 0.955528631 1.394329258 0.512227636 0.130167583 893.363775 1283336.427 0.032652585 0.960308905 1.80E-05 4.744096772 0.438800627 HYS(ph)PEDEPSPEAQPIAAYK ddPTM_A459_MK2206_30min_R1 1 HYSPEDEPSPEAQPIAAYK 19 0 A0A096LP25;Q6ZSR9 A0A096LP25 AAK1 Uncharacterized protein FLJ45252 1 HYS(0.998)PEDEPS(0.002)PEAQPIAAYK 69.259 0.011817 11026000 3032.6 3221.5 3121.5 2237.1 3550 4075.8 3727.3 2976.1 2927.6 2505.8 TRUE FALSE 2774.661445 3011.779764 2909.621277 2409.40183 3408.595983 4306.568274 3478.658618 2950.080271 3231.934497 2816.237422 0.985237048 1.069433898 1.033159085 0.855539313 1.210336869 1.529192191 1.235214968 1.047525414 1.147607255 1 11.45955325 -6.30018235 17.70423245 1.216080801 0.995194101 0.332374106 0.143102694 21.57847645 9859.875509 0.047337984 0.053688222 5.01E-07 6.30018235 -0.2208867 HYS(ph)PEDEPSPEAQPIAAYK ddPTM_A459_MK2206_30min_R2 2 HYSPEDEPSPEAQPIAAYK 19 0 A0A096LP25;Q6ZSR9 A0A096LP25 AAK1 Uncharacterized protein FLJ45252 1 HYS(1)PEDEPSPEAQPIAAYK;HYS(1)PEDEPSPEAQPIAAYK 141.83 6.51E-05 16609800 76994 79455 76030 84363 88672 83762 103629 74553 65516 77691 TRUE FALSE 82888.71984 75509.38024 78564.80225 77470.27304 85190.29174 86949.6216 90022.38782 84297.33308 71214.46325 75155.94903 1.10288967 1.004702638 1.045357064 1.030793624 1.133513618 1.156922675 1.197807878 1.121632208 0.947555904 1 16.19759969 -3.65799559 11.7581813 1.080951542 1.102869522 0 0.076334929 0 0 0.018447047 0 0.000219788 3.65799559 0.02191798 HYSPEDEPS(ph)PEAQPIAAYK ddPTM_A459_MK2206_30min_R2 2 HYSPEDEPSPEAQPIAAYK 19 0 A0A096LP25;Q6ZSR9 A0A096LP25 AAK1 Uncharacterized protein FLJ45252 1 HYSPEDEPS(1)PEAQPIAAYK;HYS(0.003)PEDEPS(0.997)PEAQPIAAYK 82.8 0.0032547 9089100 18495.8 33479 25798 42768 48042 44685 45483 26917.1 40242 25099 TRUE FALSE 19911.85267 31816.48154 26658.09244 39273.71759 46155.62969 46385.51899 39511.02747 30435.25739 43742.17642 24280.02169 0.820092046 1.310397575 1.097943519 1.617532229 1.900971518 1.910439768 1.627306103 1.253510305 1.801570731 1 14.56748209 -5.763350871 8.8689952 1.62645197 1.098819528 0.38957491 0.289948995 0.104920884 93.50418647 0.079779652 0.127152192 1.72E-06 5.763350871 -0.527632442 HYYEVSCHDQGLCR ddPTM_A459_MK2206_30min_R1 2 HYYEVSCHDQGLCR 14 0 F1T0B3;A0A087X2G1;Q92499-3;Q92499-2;Q92499 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 0 ; 176.87 3.93E-05 13099900 4379.3 3093.7 3613 2752.2 5280.7 5419.9 4880.8 3548 2602 2476.1 FALSE TRUE 4006.817538 2892.299568 3367.759626 2964.174921 5070.358537 5726.770054 4555.210738 3516.98021 2872.487211 2782.857962 1.439821074 1.039327054 1.210180208 1.065154946 1.821996885 2.057873644 1.636882227 1.263801552 1.032207626 1 11.44235156 -6.239781535 24.90528488 1.519842193 1.179496924 0.138837479 0.327029932 1403.889267 1614392.659 0.103713422 0.133770105 5.76E-07 6.239781535 -0.340345268 IAASS(ph)SFR ddPTM_A459_MK2206_30min_R2 1 IAASSSFR 8 0 Q99961-3;Q99961-2;Q99961 Q99961-3 SH3GL1 Endophilin-A2 1 IAAS(0.122)S(0.681)S(0.197)FR 83.647 0.038396 201190000 144940 203800 202460 215130 180350 192090 216570 165190 194150 204650 TRUE FALSE 156036.7178 193679.5884 209209.9154 197553.1908 173268.5528 199400.1196 188134.0989 186780.9002 211036.8161 197972.2873 0.788174547 0.978316668 1.056763642 0.997883055 0.875216199 1.007212284 0.950305224 0.943469931 1.065991705 1 17.59493897 -4.762209662 7.156421761 0.983257826 0.784406295 0.560095546 0.052592014 0.0811751 25.81126797 0.013215579 0.07872215 1.73E-05 4.762209662 -0.198851531 IAASSS(ph)FR ddPTM_A459_MK2206_30min_R1 5 IAASSSFR 8 0 Q99961-3;Q99961-2;Q99961 Q99961-3 SH3GL1 Endophilin-A2 1 IAAS(0.03)S(0.196)S(0.775)FR;IAAS(0.03)S(0.196)S(0.775)FR;IAAS(0.03)S(0.196)S(0.775)FR;IAASSS(1)FR;IAAS(0.036)S(0.223)S(0.741)FR 132.25 0.0062131 259649200 30276.8 34757.1 35756.8 30146.4 34138.3 31532 31785.6 32426.2 24740.2 24210.7 TRUE FALSE 27701.59917 32494.40647 33329.72804 32468.28095 32778.49922 33317.31459 29665.24062 32142.70115 27312.03232 27210.1043 1.018062954 1.194203672 1.22490262 1.193243532 1.20464438 1.224446412 1.090228846 1.181278131 1.003745962 1 14.73185487 -8.264056327 24.25046481 1.001872935 1.170823373 0.532062184 0.061596023 118.2004457 1095276.654 0.051106755 0.015585073 5.44E-09 8.264056327 0.168950438 IAASSS(ph)FR ddPTM_A459_MK2206_30min_R2 2 IAASSSFR 8 0 Q99961-3;Q99961-2;Q99961 Q99961-3 SH3GL1 Endophilin-A2 1 IAAS(0.035)S(0.254)S(0.71)FR;IAAS(0.042)S(0.241)S(0.717)FR 97.635 0.02011 70177000 183688 249890 247529 271090 258800 259850 242360 188723 260640 237190 TRUE FALSE 197751.2945 237480.826 255781.4933 248941.0798 248638.2116 269738.7738 210537.8409 213389.7441 283309.9961 229450.5097 0.861847266 1.034998032 1.114756701 1.084944549 1.083624577 1.175585856 0.917574082 0.930003356 1.234732476 1 17.80782349 -4.774359843 3.963288898 1.065421869 0.841775483 0.298486681 0.094061753 0.310482249 9.099987938 0.023800294 0.202569288 1.68E-05 4.774359843 -0.223646386 IAAYGHEVGK ddPTM_A459_MK2206_30min_R2 1 IAAYGHEVGK 10 0 Q16719;B8ZZA3;A0A087X297;Q16719-2;A0A087WYM2 Q16719 KYNU Kynureninase 0 150.35 0.0010024 10784000 130690 138810 137550 163900 127890 113050 149470 128120 120180 135510 FALSE TRUE 140695.7269 131916.8972 142135.8483 150508.8457 122868.396 117352.197 129844.4095 144865.7239 130633.0392 131088.3198 1.073289574 1.006320757 1.084275461 1.148148408 0.937294766 0.895214746 0.990510899 1.105100165 0.996526917 1 17.00017962 -6.271462216 24.97648428 0.988238417 1.073335632 0.356786943 0.059434972 927.4915098 2311265.891 0.020567689 0.023598003 5.35E-07 6.271462216 0.085097215 IACDEEFS(ph)DSEDEGEGGRR ddPTM_A459_MK2206_30min_R2 1 IACDEEFSDSEDEGEGGRR 19 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 1 IACDEEFS(0.988)DS(0.012)EDEGEGGRR 101.48 0.0023849 0 10128 15937 15614 13776 14941 12130 17959 13455 13069 11857 TRUE FALSE 10903.40747 15145.59175 16134.56297 12650.45673 14354.34127 12591.61565 15600.96173 15213.6147 14205.718 11470.10706 0.950593347 1.320440313 1.406661933 1.102906596 1.251456607 1.097776645 1.360140899 1.326370767 1.238499163 1 13.48559124 -7.263807888 24.99839751 1.258450262 1.203225993 0.000587961 0.14986899 1000.406461 10558642.1 0.059839053 0.042374272 5.45E-08 7.263807888 -0.055224269 IACDEEFSDS(ph)EDEGEGGRR ddPTM_A459_MK2206_30min_R2 1 IACDEEFSDSEDEGEGGRR 19 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 1 IACDEEFS(0.055)DS(0.945)EDEGEGGRR 78.244 0.0039138 13770000 13028 21198 12327 15123 19763 12240 15768 13305 16670 18954 TRUE FALSE 14025.4337 20145.33814 12737.97603 13887.40252 18987.00532 12705.80178 13697.64266 15044.00918 18119.92647 18335.53253 0.764931898 1.09870483 0.694715357 0.757403828 1.035530617 0.692960608 0.747054531 0.820483897 0.98824108 1 14.16235455 -8.26655512 14.56312098 0.994137971 0.828723154 0.210991365 0.129619268 2.412138904 6808.735888 0.107511729 0.032432981 5.41E-09 8.26655512 -0.165414817 IACEEEFS(ph)DSEEEGEGGR ddPTM_A459_MK2206_30min_R2 1 IACEEEFSDSEEEGEGGR 18 0 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 IACEEEFS(0.988)DS(0.012)EEEGEGGR 117.13 0.0015897 0 3952.7 7485.8 4343.6 7528.4 6439 8514.1 7071.7 3015.6 6220 6002.3 TRUE FALSE 4255.321751 7114.066057 4488.413456 6913.305638 6186.172507 8838.110042 6143.177295 3409.749274 6761.004357 5806.445443 0.732861747 1.225201567 0.773005361 1.190626125 1.065397508 1.522120569 1.05799277 0.587235221 1.164396432 1 12.50343954 -7.547624581 24.99823567 0.890012244 1.09841604 0.079204809 0.249754477 492.6383172 497656.8337 0.115104082 0.066458515 2.83E-08 7.547624581 0.208403796 IACEEEFS(ph)DSEEEGEGGRK ddPTM_A459_MK2206_30min_R1 1 IACEEEFSDSEEEGEGGRK 19 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 IACEEEFS(0.986)DS(0.014)EEEGEGGRK 97.776 0.00077714 10002000 1023.4 1129.7 966.95 1096.5 1019.8 858.8 972 1067 719.17 784.05 TRUE FALSE 936.3544559 1056.156325 901.3161281 1180.95262 979.1792065 907.4245138 907.1596535 1057.671331 793.9302951 881.1840333 1.062609422 1.198564982 1.02284664 1.3401884 1.111208521 1.029778661 1.029478088 1.200284267 0.900981254 1 9.783299544 -6.536095317 10.45873023 1.047259305 1.159054057 0.233482819 0.104830641 0.470750232 352.8778306 0.033040007 0.033458785 2.91E-07 6.536095317 0.111794752 IACEEEFS(ph)DSEEEGEGGRK ddPTM_A459_MK2206_30min_R2 2 IACEEEFSDSEEEGEGGRK 19 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 IACEEEFS(0.941)DS(0.059)EEEGEGGRK;IACEEEFS(0.992)DS(0.008)EEEGEGGRK 66.889 0.011121 18576300 39653 50007 44490 50558 47929 40663 52741 45419 39977 46953 TRUE FALSE 42688.86417 47523.7251 45973.27439 46427.24967 46047.06664 42210.45896 45816.04335 51355.41925 43454.1272 45420.92746 0.939850121 1.046295788 1.012160627 1.022155475 1.013785257 0.929317417 1.008698983 1.130655452 0.956698369 1 15.47106954 -7.53975301 24.99937719 1.040141574 0.996796132 0.068461998 0.053085885 528.6558093 783197.675 0.024050468 0.013889379 2.89E-08 7.53975301 -0.043345442 IACKS(ph)PPPESMDTPTSTR ddPTM_A459_MK2206_30min_R1 1 IACKSPPPESMDTPTSTR 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACKS(1)PPPESMDTPTSTR 53.21 0.042467 4894300 1763.4 1790.9 2042.3 1327.6 1801 1485.8 1129.8 1355.4 1296.4 1128.3 TRUE FALSE 1613.41357 1674.312084 1903.674366 1429.851982 1729.262356 1569.924712 1054.433103 1343.549881 1431.165419 1268.082322 1.272325575 1.320349677 1.501223014 1.127570314 1.36368304 1.238030595 0.831517864 1.059513138 1.12860608 1 10.30843269 -7.072244199 6.479554334 1.010884583 1.315626525 0.641392436 0.110757125 0.157424595 11.55011355 0.042274528 0.032854922 8.47E-08 7.072244199 0.304741943 IACKS(ph)PPPESVDTPTSTK ddPTM_A459_MK2206_30min_R1 2 IACKSPPPESVDTPTSTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACKS(0.994)PPPES(0.006)VDTPTSTK;IACKS(0.999)PPPES(0.001)VDTPTSTK 132.76 0.00025746 57770000 8439.3 8144.3 8881 6019.2 7072.3 7312.8 5227.6 7205.4 7727.8 4914.6 TRUE FALSE 7721.493218 7614.10459 8278.182464 6482.799827 6790.595315 7726.844416 4878.876342 7142.403947 8531.132464 5523.457751 1.397945556 1.378503273 1.498731924 1.173685057 1.229410203 1.398914369 0.883301106 1.293103753 1.544527513 1 12.43135598 -5.766446151 24.99132737 1.223898133 1.420404561 0.222187412 0.177568888 195.9083704 977883.4639 0.049781476 0.076476158 1.71E-06 5.766446151 0.196506428 IACKS(ph)PPPESVDTPTSTK ddPTM_A459_MK2206_30min_R2 4 IACKSPPPESVDTPTSTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACKS(0.967)PPPES(0.02)VDT(0.014)PTSTK;IACKS(0.999)PPPES(0.001)VDTPTSTK;IACKS(0.999)PPPES(0.001)VDTPTSTK;IACKS(0.999)PPPES(0.001)VDTPTSTK 119.16 0.00053972 125418000 230001 290912 211312 306150 227052 212227 447886 388399 157023 224929 TRUE FALSE 247610.0534 276465.7331 218357.0366 281136.5657 218136.7976 220303.4472 389078.0302 439164.0829 170680.5767 217589.5852 1.137968314 1.270583484 1.00352706 1.292049734 1.002514884 1.012472389 1.788128002 2.018313894 0.784415194 1 17.73124998 -7.239999953 24.54600791 1.482573822 1.123910114 0.115958178 0.345298822 1040.510758 1191282.593 0.129061282 0.099865425 5.75E-08 7.239999953 -0.358663708 IACKS(ph)PQPDPVDTPASTK ddPTM_A459_MK2206_30min_R2 3 IACKSPQPDPVDTPASTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACKS(1)PQPDPVDTPASTK;IACKS(0.94)PQPDPVDT(0.028)PAS(0.013)T(0.018)K;IACKS(0.992)PQPDPVDT(0.006)PAS(0.002)T(0.001)K 84.327 0.0044291 16379800 105353 105167 73405 112517 74530 78392 194333 203256 66528 92676 TRUE FALSE 113418.9067 99944.55971 75852.28606 103324.0012 71603.57772 81375.26249 168816.8437 229822.2571 72314.48518 89651.98971 1.265101946 1.114805818 0.846074764 1.152500926 0.798683643 0.907679381 1.883023949 2.563493101 0.806613277 1 16.45204798 -7.256866914 24.94043969 1.693573682 1.007572919 0.226490311 0.473171623 443.8623313 2421047.894 0.179409389 0.134204807 5.54E-08 7.256866914 -0.686000763 IADGVNEINTENMVS(ph)SIEPEKQDSPPPKPPR ddPTM_A459_MK2206_30min_R2 1 IADGVNEINTENMVSSIEPEKQDSPPPKPPR 31 2 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 IADGVNEINT(0.001)ENMVS(0.436)S(0.436)IEPEKQDS(0.127)PPPKPPR 65.248 0.0017136 5601400 13755 18832 19900 18639 17359 17286 22601 14031 17184 17599 TRUE FALSE 14808.09338 17896.83026 20563.45607 17116.13408 16677.39844 17943.83084 19633.46155 15864.89988 18678.63326 17024.74607 0.869798193 1.051224505 1.207856844 1.005367951 0.979597485 1.053985226 1.153230801 0.931872922 1.097146071 1 14.05534566 -7.790455002 24.99876908 1.010882321 1.048508449 0.029499557 0.09420489 1010.419587 870526.4265 0.052005627 0.024987507 1.62E-08 7.790455002 0.037626127 IADMGHLK ddPTM_A459_MK2206_30min_R1 2 IADMGHLK 8 0 P12004 P12004 PCNA Proliferating cell nuclear antigen 0 ; 113.26 0.015209 11708400 16182.7 16024.3 17485 15968.4 17181.9 15950.1 17914.5 17364.9 14866.7 15231.8 FALSE TRUE 14806.27639 14981.11516 16298.16692 17198.28893 16497.50854 16853.18088 16719.45639 17213.08051 16412.14667 17118.83038 0.864911683 0.875124925 0.952060775 1.004641588 0.963705357 0.98448203 0.976670486 1.005505641 0.958718925 1 14.06329651 -5.335393659 2.88980975 0.983766234 0.865592955 0.897351184 0.015313357 0.06892853 1.109666002 0.003894762 0.010450703 4.62E-06 5.335393659 -0.118173279 IADMGHLK ddPTM_A459_MK2206_30min_R2 1 IADMGHLK 8 0 P12004 P12004 PCNA Proliferating cell nuclear antigen 0 87.639 0.045225 5845000 69003 75942 84023 90112 89950 85153 93292 66142 78437 84883 FALSE TRUE 74285.92273 72170.83071 86824.28488 82749.56135 86418.11104 88393.55708 81042.64834 74786.9865 85259.30848 82113.27466 0.904676169 0.878917946 1.05737209 1.007748889 1.052425584 1.076483156 0.986961593 0.910778273 1.03831334 1 16.32532785 -5.252994628 24.92718104 1.015165939 0.891797041 0.556137669 0.044468279 469.5964079 1386144.324 0.012251458 0.031304883 5.58E-06 5.252994628 -0.123368897 IADPEHDHTGFLTEY(ph)VATR ddPTM_A459_MK2206_30min_R1 2 IADPEHDHTGFLTEYVATR 19 0 B3KR49;E9PJF0;E9PQW4;P27361-2;P27361-3;P27361 B3KR49 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 1 IADPEHDHTGFLTEY(1)VATR;IADPEHDHTGFLTEY(0.997)VAT(0.003)R 185.14 3.03E-14 33622000 10607.5 10491.4 8509.1 7099.2 7450.4 6030 4651.1 3761.3 3796.9 2893.4 TRUE FALSE 9705.276423 9808.407953 7931.526 7645.981614 7153.634792 6371.413389 4340.833605 3728.415351 4191.601342 3251.856236 2.984534284 3.016248949 2.439076461 2.351266802 2.199861947 1.959315827 1.334878694 1.146549872 1.288987285 1 11.66704776 -6.546867662 0.502288511 0.947664026 3.180012197 0.962100001 0.138048695 0.208437808 0.109636655 0.130034031 0.212364586 2.84E-07 6.546867662 2.23234817 up IADPEHDHTGFLTEY(ph)VATR ddPTM_A459_MK2206_30min_R2 3 IADPEHDHTGFLTEYVATR 19 0 B3KR49;E9PJF0;E9PQW4;P27361-2;P27361-3;P27361 B3KR49 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 1 IADPEHDHTGFLT(0.001)EY(0.999)VATR;IADPEHDHTGFLT(0.001)EY(0.997)VAT(0.002)R;IADPEHDHTGFLT(0.209)EY(0.65)VAT(0.142)R 133.52 0.00036561 21374200 83238 110787 87141 104576 74375 70409 55005 47489 52610 45026 TRUE FALSE 89610.76528 105285.4787 90046.23745 96031.80628 71454.6638 73088.46383 47782.77743 53695.97535 57185.9227 43556.80531 2.057330988 2.417199286 2.067328786 2.204748617 1.640493679 1.678003318 1.097022086 1.232780388 1.312904431 1 15.41061052 -6.684052944 1.04574729 1.151487618 2.240991146 0.893819212 0.15453067 0.14384552 0.33760985 0.078260373 0.076769536 2.07E-07 6.684052944 1.089503528 up IADPEHDHTGFLTEYVAT(ph)R ddPTM_A459_MK2206_30min_R2 1 IADPEHDHTGFLTEYVATR 19 0 B3KR49;E9PJF0;E9PQW4;P27361-2;P27361-3;P27361 B3KR49 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 1 IADPEHDHTGFLT(0.026)EY(0.345)VAT(0.629)R 174.39 1.00E-09 14055000 46491 67692 44090 46539 31632 36249 28146 19015 21158 24016 TRUE FALSE 50050.38671 64330.51371 45559.93859 42736.61483 30389.96874 37628.4811 24450.39639 21500.32579 22998.2846 23232.35989 2.154339333 2.7690047 1.961055132 1.839529649 1.308087895 1.619658153 1.052428445 0.925447346 0.989924601 1 14.50384809 -6.081322334 0.649850449 0.947227982 2.624882312 0.859142367 0.219476697 0.327461682 0.274420815 0.135396374 0.326008516 8.29E-07 6.081322334 1.67765433 up IAELEEEQSQGS(ph)TTNSDWMK ddPTM_A459_MK2206_30min_R1 1 IAELEEEQSQGSTTNSDWMK 20 0 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 IAELEEEQSQGS(0.79)T(0.206)T(0.004)NSDWMK 125.35 0.00014945 3776800 1875.6 2098.9 2056.6 1690.7 1723 1925.2 1734.1 1725.1 1900.1 2098.2 TRUE FALSE 1716.070371 1962.261229 1917.003722 1820.918007 1654.369261 2034.20316 1618.421353 1710.017633 2097.622195 2358.140857 0.727721741 0.832122145 0.812930117 0.772183732 0.701556591 0.862630048 0.686312418 0.725155 0.889523706 1 11.20343418 -8.505539921 3.807428276 0.999283619 0.768275347 0.657439696 0.0546989 0.114654098 4.319539055 0.052760045 0.013866843 3.12E-09 8.505539921 -0.231008271 IAELEEEQSQGSTTNS(ph)DWMK ddPTM_A459_MK2206_30min_R1 2 IAELEEEQSQGSTTNSDWMK 20 0 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 IAELEEEQSQGST(0.003)T(0.008)NS(0.989)DWMK;IAELEEEQSQGS(0.001)T(0.012)T(0.037)NS(0.95)DWMK 174.99 1.04E-10 12842800 8731 8576.5 9309.1 7376.3 7501.1 6665.4 7473 7230 8166.3 8697.2 TRUE FALSE 7988.382602 8018.168291 8677.224229 7944.423904 7202.315303 7042.789188 6974.489805 7166.788872 9015.216108 9774.674797 0.817253031 0.820300261 0.887725107 0.812755828 0.736834263 0.720513913 0.713526532 0.733199725 0.922303432 1 13.25483299 -8.447443962 4.074200061 0.998355844 0.781133695 0.662321675 0.052963473 0.138919555 4.224956715 0.059769292 0.015679885 3.57E-09 8.447443962 -0.217222149 IAEPS(ph)VCGR ddPTM_A459_MK2206_30min_R1 1 IAEPSVCGR 9 0 A0A3B3ITP6;A0A3B3IT92;P33991;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 IAEPS(1)VCGR 95.483 0.022335 2893500 1731.7 1417.1 1593 1705.3 2027.6 1885.6 1871.9 1487.1 1274.2 1640.1 TRUE FALSE 1584.409821 1324.846532 1484.871598 1836.642501 1946.836398 1992.361042 1747.028966 1474.098441 1406.65765 1843.28797 0.859556318 0.718740942 0.805555954 0.996394775 1.056175937 1.080873458 0.947778641 0.799711421 0.763124196 1 10.84806576 -5.692072973 6.418192855 0.950510059 0.784129864 0.331712797 0.100390091 0.26511859 18.97130586 0.031062472 0.05393769 2.03E-06 5.692072973 -0.166380194 IAEPS(ph)VCGR ddPTM_A459_MK2206_30min_R2 2 IAEPSVCGR 9 0 A0A3B3ITP6;A0A3B3IT92;P33991;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 IAEPS(1)VCGR;IAEPS(1)VCGR 92.611 0.025664 14910500 35811 42081 38161 44057 42131 40440 45164 39240 39445 40524 TRUE FALSE 38552.71769 39991.31873 39433.26869 40457.40217 40476.72525 41978.97254 39233.91255 44368.80273 42875.8548 39201.7052 0.983444916 1.020142326 1.005906975 1.032031693 1.032524607 1.070845575 1.00082158 1.131807979 1.093724229 1 15.25862879 -6.281417944 0.749287847 1.070262501 0.996726389 0.276487335 0.038223127 0.908469019 1.103001848 0.022390881 0.038548139 5.23E-07 6.281417944 -0.073536112 IAESNHIK ddPTM_A459_MK2206_30min_R2 1 IAESNHIK 8 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 112.41 0.015714 4546300 16971 39668 27791 56515 53856 62495 52199 37876 48313 28878 FALSE TRUE 18270.31281 37698.1448 28717.53807 51897.54372 51741.34284 64873.29102 45345.2086 42826.52325 52515.17741 27935.71322 0.654012756 1.349460617 1.027986572 1.857749015 1.852157574 2.322235001 1.623198528 1.533038477 1.879858122 1 14.76982303 -5.758126485 24.94415172 1.772305859 1.044383848 0.456525075 0.353459338 71.42233336 537756.8913 0.094691729 0.155756599 1.75E-06 5.758126485 -0.727922011 IAGEASR ddPTM_A459_MK2206_30min_R2 2 IAGEASR 7 0 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q16778;P33778;P23527;P06899;Q6DRA6;Q6DN03 U3KQK0;Q16778 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Putative histone H2B type 2-D;Putative histone H2B type 2-C 0 ; 137.83 0.040426 14944400 26587 17342.9 19577.5 21281.4 30014 29893.1 22854.7 141543 83274 31760 FALSE TRUE 28622.52116 16481.6768 20230.20408 19542.64154 28835.49955 31030.70287 19853.85044 160043.1561 90517.022 30723.6738 0.931611283 0.536448763 0.658456544 0.636077628 0.938543344 1.009993241 0.646206914 5.209115197 2.946165312 1 14.90706312 -7.7312313 24.98827539 3.308230647 0.763519386 0.537284732 0.963567755 122.1115215 101011.3232 0.421949252 0.243573873 1.86E-08 7.7312313 -2.544711261 IAHFLDR ddPTM_A459_MK2206_30min_R1 2 IAHFLDR 7 0 P60228;H0YBR5;E5RIP5;E5RJ25;E5RII3;E5RHS5 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E 0 ; 111.04 0.021302 14570500 15865.2 17707.9 17978.5 16716.7 15763.6 13111.2 14657.5 12428.6 12523 9118.3 FALSE TRUE 14515.78143 16555.11249 16758.16951 18004.22313 15135.70243 13853.54481 13679.72492 12319.93806 13824.81066 10247.94384 1.41645794 1.615456988 1.635271403 1.756862001 1.476950173 1.351836527 1.334875086 1.202186336 1.349032633 1 13.32304685 -6.928071998 1.39006754 1.217923482 1.608811015 0.685440608 0.117869957 0.25155253 1.000625033 0.059716836 0.046638528 1.18E-07 6.928071998 0.390887534 IAHFLDR ddPTM_A459_MK2206_30min_R2 1 IAHFLDR 7 0 P60228;H0YBR5;E5RIP5;E5RJ25;E5RII3;E5RHS5 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E 0 117.93 0.015787 2606500 20061 20187 20543 30776 23678 23736 23553 20841 20142 23103 FALSE TRUE 21596.88558 19184.54293 21227.89337 28261.50235 22748.28275 24639.29011 20460.46281 23564.99026 21893.91475 22349.151 0.966340313 0.858401419 0.949829967 1.264544785 1.017858922 1.102470967 0.915491725 1.054402033 0.979630714 1 14.44793241 -5.539085799 24.99985308 1.050299841 0.910306969 0.286463403 0.090123977 268.2919162 413846.6476 0.024389606 0.042259116 2.89E-06 5.539085799 -0.139992871 IAIQQT(ph)Y(ph)S(ph)WT(ph)NQIDIS(ph)DK ddPTM_A459_MK2206_30min_R1 1 IAIQQTYSWTNQIDISDK 18 0 Q9BX63;Q9BX63-2 Q9BX63 BRIP1 Fanconi anemia group J protein 5 IAIQQT(1)Y(1)S(1)WT(1)NQIDIS(1)DK 51.606 0.026668 3577100 1436.2 1423.4 1500.5 921.9 1428.4 1475.3 1531.8 1462.9 1382.8 1122 TRUE FALSE 1314.043648 1330.736401 1398.650241 992.9048977 1371.503803 1558.830211 1429.616417 1450.11002 1526.547008 1261.001831 1.042063236 1.055300927 1.109157978 0.7873937 1.087630303 1.23618394 1.133714783 1.149966625 1.210582706 1 10.30035465 -6.518689954 24.92456397 1.155491117 1.001326903 0.332839708 0.098079677 193.001422 1148426.257 0.031520001 0.03225824 3.03E-07 6.518689954 -0.154164214 IALESEGRPEEQMESDNCS(ph)GGDDDWTHLSSK ddPTM_A459_MK2206_30min_R1 4 IALESEGRPEEQMESDNCSGGDDDWTHLSSK 31 1 Q13501;Q13501-2 Q13501 SQSTM1 Sequestosome-1 1 IALESEGRPEEQMES(0.002)DNCS(0.988)GGDDDWT(0.01)HLSSK;IALES(0.007)EGRPEEQMES(0.225)DNCS(0.709)GGDDDWT(0.051)HLS(0.005)S(0.003)K;IALESEGRPEEQMES(0.002)DNCS(0.998)GGDDDWTHLSSK;IALES(0.006)EGRPEEQMES(0.204)DNCS(0.594)GGDDDWT(0.195)HLS(0.001)S(0.001)K 107.34 1.77E-11 59379600 11748.55 5484.27 7477.86 4957.95 14811.24 14592.64 13458.3 9160.59 5859.87 6159.12 TRUE FALSE 10749.27413 5127.243026 6970.283698 5339.812168 14221.27695 15418.86267 12560.52136 9080.499927 6469.024456 6922.158285 1.552878985 0.740700056 1.006952371 0.771408562 2.054457058 2.227464619 1.814538305 1.311801833 0.93453865 1 12.75700622 -6.249243584 24.95704945 1.619110319 0.997390874 0.254622883 0.443824875 996.8114305 2039839.606 0.139392913 0.178572626 5.63E-07 6.249243584 -0.621719445 IALESEGRPEEQMESDNCSGGDDDWT(ph)HLSSK ddPTM_A459_MK2206_30min_R2 1 IALESEGRPEEQMESDNCSGGDDDWTHLSSK 31 1 Q13501;Q13501-2 Q13501 SQSTM1 Sequestosome-1 1 IALESEGRPEEQMESDNCS(0.005)GGDDDWT(0.991)HLS(0.003)S(0.001)K 71.297 8.44E-05 28157000 6149.2 5408.6 6381.7 6118.5 7471 5967 5497.1 4760.7 4383 5637.8 TRUE FALSE 6619.98748 5140.016789 6594.462693 5618.598978 7177.651001 6194.078366 4775.324167 5382.939836 4764.225417 5453.839048 1.213821571 0.942458467 1.20914142 1.0302099 1.316073125 1.13572812 0.875589493 0.987000128 0.873554459 1 12.41305641 -7.250628055 24.11752496 0.932952699 1.138190051 0.491340789 0.103251343 380.3885942 848558.8024 0.038616291 0.02958236 5.62E-08 7.250628055 0.205237352 IAQLEEQLDNETK ddPTM_A459_MK2206_30min_R1 2 IAQLEEQLDNETK 13 0 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 ; 194.06 0.0026511 6086200 2583.5 2245.2 2193.6 2567.2 2504.8 2686.9 2283.1 2306 2368.92 2456.3 FALSE TRUE 2363.759759 2099.037072 2044.704544 2764.926189 2405.028512 2839.029956 2130.798565 2285.838885 2615.177711 2760.604988 0.856247007 0.76035401 0.740672625 1.001565309 0.871196177 1.028408616 0.771859275 0.828020994 0.947320505 1 11.43076875 -1.522878745 0.063523631 1.129805713 0.323427036 0.214372787 0.090606814 536.8108534 2.547375292 6.225539147 39.51539936 0.03 1.522878745 -0.806378677 IAQLEEQLDNETK ddPTM_A459_MK2206_30min_R2 1 IAQLEEQLDNETK 13 0 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 179.67 2.26E-09 0 12200 16540 13412 13779 15389 10480 15453 10405 9462.4 15278 FALSE TRUE 13134.04138 15718.64765 13859.14939 12653.21162 14784.75054 10878.82374 13424.00254 11764.96923 10285.42245 14779.48011 0.888667347 1.063545371 0.937729154 0.856133743 1.000356604 0.736076213 0.908286519 0.796034038 0.695925863 1 13.8513079 -6.752449747 24.9992431 0.819580523 0.949816944 0.287781881 0.095597178 238.2985463 662682.9913 0.030771701 0.030344992 1.77E-07 6.752449747 0.13023642 IAQLS(ph)ESPVILTPNAK ddPTM_A459_MK2206_30min_R1 1 IAQLSESPVILTPNAK 16 0 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 IAQLS(0.561)ES(0.22)PVILT(0.22)PNAK 220.34 8.33E-11 7068600 2565.2 2552.6 2609 2603.8 2556.4 2412.6 2311.7 2583.8 2074.6 2181.9 TRUE FALSE 2347.01627 2386.425276 2431.908349 2804.345127 2454.573175 2549.199327 2157.490711 2561.210109 2290.262094 2452.210245 0.957102383 0.973173194 0.991720981 1.143598977 1.000963592 1.039551699 0.879814737 1.044449641 0.933958293 1 11.25986696 IAQLS(ph)ESPVILTPNAK ddPTM_A459_MK2206_30min_R2 1 IAQLSESPVILTPNAK 16 0 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 IAQLS(0.761)ES(0.188)PVILT(0.051)PNAK 134.81 0.00042079 8705700 34892 43049 36503 43217 41174 39234 46249 31955 36492 42592 TRUE FALSE 37563.35835 40911.24926 37719.9918 39686.03286 39557.30188 40727.07736 40176.45074 36131.62822 39666.0082 41202.22653 0.91168273 0.992937827 0.915484307 0.963201171 0.960076802 0.988467876 0.975103875 0.876933876 0.962715162 1 15.33043468 IAQLSES(ph)PVILTPNAK ddPTM_A459_MK2206_30min_R2 1 IAQLSESPVILTPNAK 16 0 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 IAQLS(0.055)ES(0.945)PVILTPNAK 191.47 6.66E-15 0 22103 27910 19708 24518 23923 22432 27114 19409 19493 21499 TRUE FALSE 23795.22267 26524.02998 20365.05488 22514.80097 22983.66282 23285.66548 23553.89923 21945.82294 21188.4659 20797.48939 1.14413919 1.275347687 0.97920737 1.082573023 1.10511718 1.119638291 1.132535701 1.055215008 1.018799217 1 14.34412176 -1.522878745 0.125538251 0.977372924 1.609409086 0.307474129 0.06806357 120.2563929 1.032781025 0.427001914 13.37207108 0.03 1.522878745 0.632036161 IAQLSESPVILT(ph)PNAK ddPTM_A459_MK2206_30min_R1 1 IAQLSESPVILTPNAK 16 0 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 IAQLS(0.015)ES(0.074)PVILT(0.911)PNAK 225.7 1.16E-11 10071000 2373.3 2649.4 2315.2 2175.3 2253.9 1886.3 1996.6 1722.2 2226.7 1828.1 TRUE FALSE 2171.438372 2476.923578 2158.050675 2342.841983 2164.12239 1993.100676 1863.410457 1707.142987 2458.173433 2054.578829 1.056877615 1.205562689 1.050361584 1.140302796 1.053316796 0.970077491 0.906954959 0.830896806 1.19643666 1 11.00462697 -6.596208981 3.034292069 0.965231898 1.114877636 0.289304255 0.096273724 0.296217707 5.524353903 0.032872788 0.033464574 2.53E-07 6.596208981 0.149645738 IAQVS(ph)PGPR ddPTM_A459_MK2206_30min_R2 2 IAQVSPGPR 9 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 IAQVS(1)PGPR;IAQVS(1)PGPR 87.667 0.032216 119257000 138963 203624 183917 186361 205073 196960 201142 132119 187196 165891 TRUE FALSE 149602.1141 193512.3283 190048.701 171134.7102 197020.8036 204455.4508 174731.8138 149387.4069 203477.9697 160477.9903 0.932228238 1.205849649 1.184266457 1.066406115 1.227712307 1.274040449 1.08882105 0.930890315 1.267949389 1 17.29201592 -10.645642 4.786350509 0.999991602 1.132719949 0.097465475 0.119391706 1.06E-05 1.94E-06 0.114426095 0.027750649 2.26E-11 10.645642 0.132728347 IAS(ph)DEEIQGTK ddPTM_A459_MK2206_30min_R1 6 IASDEEIQGTK 11 0 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;Q8WX93-4;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK 236.28 2.77E-10 1262719400 26051.4 26256.2 24011.1 20341.9 17398.1 14506.3 16894.4 17420.6 17778.4 15669 TRUE FALSE 23835.59163 24546.91661 22381.29343 21908.63666 16705.09684 15327.63417 15767.4054 17268.29353 19626.5283 17610.19401 1.353511018 1.393903814 1.270928271 1.244088319 0.948603793 0.870384174 0.895356711 0.980585081 1.11449813 1 14.10412318 -6.121934983 2.612527475 0.956801008 1.343428943 0.860428253 0.06909977 0.105221777 1.399285729 0.023880599 0.033122148 7.55E-07 6.121934983 0.386627935 IAS(ph)DEEIQGTK ddPTM_A459_MK2206_30min_R2 8 IASDEEIQGTK 11 0 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;Q8WX93-4;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK 206.32 1.74E-05 2165364800 539358 587985 492812 452521.7 432171 257901.2 405585.9 328131.8 292331.6 412882.2 TRUE FALSE 580651.6632 558786.5199 509242.1061 415549.2296 415201.7951 267715.8109 352331.9841 371019.7529 317758.0742 399409.8876 1.453773883 1.399030262 1.274986228 1.040407968 1.039538098 0.670278376 0.882131352 0.9289198 0.795568873 1 18.60751052 -5.790385151 1.221519958 0.858722197 1.459161128 0.853733412 0.09288973 0.172889968 0.510726848 0.032891134 0.082677641 1.62E-06 5.790385151 0.600438931 IAS(ph)DEEIQGTKDAVIQDLER ddPTM_A459_MK2206_30min_R1 2 IASDEEIQGTKDAVIQDLER 20 1 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;Q8WX93-4;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 IAS(1)DEEIQGTKDAVIQDLER;IAS(1)DEEIQGTKDAVIQDLER 114.78 0.00015048 22976000 4679.5 4377.7 5021.3 6644.5 6171.5 3505.2 2381.1 6792.4 1900.08 1290.87 TRUE FALSE 4281.483952 4092.710934 4680.468146 7156.260541 5925.676087 3703.661395 2222.261164 6733.014763 2097.600116 1450.792721 2.951134155 2.821017003 3.226145319 4.932655394 4.084440182 2.552853582 1.531756488 4.640921246 1.445830328 1 10.5026257 -8.674027314 0.660198629 0.936762731 3.446030231 0.34993114 1.032349251 1.190908733 1.132378927 1.11224717 0.435308941 2.12E-09 8.674027314 2.5092675 IAS(ph)HDFDPTGLVQR ddPTM_A459_MK2206_30min_R2 1 IASHDFDPTGLVQR 14 0 Q9NZN5-2 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 IAS(0.99)HDFDPT(0.01)GLVQR 83.243 0.028187 3272700 20154 21664 21865 24805 22730 19035 22323 15037 14490 21247 TRUE FALSE 21697.00574 20588.19726 22593.96819 22778.35215 21837.50599 19759.39026 19391.96329 17002.38753 15750.31401 20553.71213 1.055624677 1.001677806 1.099264602 1.108235437 1.062460438 0.961353849 0.94347742 0.827217362 0.766300214 1 14.32711136 -7.178113818 1.611838719 0.853778075 1.066283953 0.641556961 0.064115057 0.230536525 1.178309164 0.034278021 0.02224248 6.64E-08 7.178113818 0.212505877 IAS(ph)PVSR ddPTM_A459_MK2206_30min_R1 2 IASPVSR 7 0 A0A087WU64;A6NMQ1;P09884 A0A087WU64 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit 1 IAS(0.973)PVS(0.027)R;IAS(0.97)PVS(0.03)R 101.46 0.019909 62564000 3269.9 2493.1 2672.1 2535.9 2776.1 2353.6 2427.7 2357.6 2178.1 2284.9 TRUE FALSE 2991.777834 2330.798737 2490.725297 2731.215457 2665.522059 2486.858798 2265.752563 2336.987752 2404.521289 2567.970662 1.165035831 0.907642276 0.969919685 1.063569572 1.037987738 0.968414022 0.88231248 0.910052356 0.936350763 1 11.32641301 -6.973351595 4.74928608 0.924383196 1.020100833 0.305503696 0.068023439 0.245524733 13.859135 0.024822012 0.021118259 1.06E-07 6.973351595 0.095717637 IAS(ph)PVSR ddPTM_A459_MK2206_30min_R2 2 IASPVSR 7 0 A0A087WU64;A6NMQ1;P09884 A0A087WU64 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit 1 IAS(0.954)PVS(0.046)R;IAS(0.954)PVS(0.046)R 82.75 0.040577 24833100 48346 53259 49220 52472 55754 49858 58698 40052 51170 47111 TRUE FALSE 52047.40693 50614.23551 50860.97023 48184.86975 53564.81782 51755.38113 50990.88209 45286.93392 55620.67411 45573.77193 1.142047382 1.110600097 1.11601406 1.057293871 1.175343088 1.135639622 1.118864644 0.993706073 1.220453602 1 15.47591616 -11.26337594 2.922708118 0.979907213 1.11521614 0.270475654 0.05829421 41849050.23 29378146.27 6006307.368 0.013841307 5.45E-12 11.26337594 0.135308927 IASEASFSSSEGS(ph)PLSR ddPTM_A459_MK2206_30min_R1 1 IASEASFSSSEGSPLSR 17 0 A0A087WX12;A0A087X032;A0A087WTH3;A0A087X251;A0A087X0T6;Q2M2Z5-5;Q2M2Z5-2;Q2M2Z5-3;Q2M2Z5-4;Q2M2Z5 A0A087WX12 KIZ Centrosomal protein kizuna 1 IASEASFSSS(0.001)EGS(0.997)PLS(0.003)R 183.23 6.63E-08 2894900 1027.2 1021.1 850.02 1045.1 1147.6 1136 1251.2 1061.4 959.92 787.66 TRUE FALSE 939.831246 954.6262044 792.3230107 1125.593783 1101.888662 1200.319338 1167.734731 1052.120292 1059.707119 885.2412673 1.06166678 1.078379691 0.895036235 1.271510745 1.244732597 1.355923388 1.319114657 1.188512477 1.197082827 1 9.789926897 -5.777113269 24.99966531 1.243288087 1.018362772 0.472514937 0.102100995 183.1526773 292125.7968 0.028225737 0.042028681 1.67E-06 5.777113269 -0.224925314 IASLEVENQSLR ddPTM_A459_MK2206_30min_R1 2 IASLEVENQSLR 12 0 P29692;E9PI39;E9PQ49;E9PK01;P29692-2;E9PRY8;A0A087X1X7;E9PL12;P29692-3;E9PL71;E9PPR1;E9PMW7;E9PIZ1;H0YCK7;E9PN91 P29692 EEF1D Elongation factor 1-delta 0 ; 157.68 0.0061905 11795300 2752.6 2351.14 2310.45 1873.78 2361.4 2081.19 2141.06 2001.22 1898.45 1602.62 FALSE TRUE 2518.476916 2198.080359 2153.623091 2018.09886 2267.340438 2199.025179 1998.233794 1983.723545 2095.800671 1801.164665 1.398249124 1.220366134 1.195683623 1.120441068 1.258819075 1.220890695 1.109412056 1.101356019 1.163580828 1 10.81471436 -1.522878745 0.105867687 0.935163084 2.040588088 0.645457437 0.060945423 82.26608923 0.6141976 0.675453084 13.24352116 0.03 1.522878745 1.105425005 IASLEVENQSLR ddPTM_A459_MK2206_30min_R2 1 IASLEVENQSLR 12 0 P29692;E9PI39;E9PQ49;E9PK01;P29692-2;E9PRY8;A0A087X1X7;E9PL12;P29692-3;E9PL71;E9PPR1;E9PMW7;E9PIZ1;H0YCK7;E9PN91 P29692 EEF1D Elongation factor 1-delta 0 155.53 0.0059126 1965100 9504.1 12414 11452 10152 15761 9790.4 15421 6894.2 9877.1 11437 FALSE TRUE 10231.7412 11797.53881 11833.80396 9322.549125 15142.14395 10162.98053 13396.20418 7795.295611 10736.1923 11063.81163 0.924793511 1.066317758 1.069595576 0.8426164 1.368619103 0.918578594 1.21081275 0.704575952 0.970388205 1 13.43356088 -7.757676031 24.9999945 0.878111579 1.056528003 0.181702416 0.160343361 145.0870639 963836.6708 0.073993902 0.040622713 1.75E-08 7.757676031 0.178416424 IASPVS(ph)R ddPTM_A459_MK2206_30min_R1 1 IASPVSR 7 0 A0A087WU64;A6NMQ1;P09884 A0A087WU64 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit 1 IAS(0.083)PVS(0.917)R 98.582 0.021764 24275000 1373.9 1249.6 1158.4 950.49 1325.4 1127.3 1111.4 1073.5 1105.1 1024 TRUE FALSE 1257.04259 1168.250813 1079.771035 1023.696904 1272.606511 1191.126752 1037.260534 1064.114503 1219.9791 1150.860851 1.092262883 1.015110395 0.938229009 0.889505368 1.105786604 1.034987636 0.901291006 0.924624816 1.060057868 1 10.16849769 -4.849519468 3.457995428 0.979124171 1.098355708 0.197302426 0.067085503 0.442366324 8.805215011 0.01778661 0.124535367 1.41E-05 4.849519468 0.119231537 IAVAAQNCYK ddPTM_A459_MK2206_30min_R1 1 IAVAAQNCYK 10 0 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 0 160.75 0.0060523 7018200 2592.6 2758.3 2573.7 2538.7 2501.7 2591.9 2646.7 2599.4 2178.1 2156 FALSE TRUE 2372.085756 2578.734169 2399.004415 2734.231114 2402.051992 2738.651138 2470.143472 2576.67372 2404.521289 2423.101557 0.978946074 1.064228679 0.990055249 1.128401369 0.991312966 1.130225487 1.019413926 1.063378344 0.992332031 1 11.24263916 -1.553455899 21.47152552 1.040608289 0.005216985 0 0.054801427 0 0 0.011449072 0 0.027960446 1.553455899 -1.035391304 IAVETAAT(ph)ARK ddPTM_A459_MK2206_30min_R1 1 IAVETAATARK 11 1 P43250-2 P43250-2 1 IAVETAAT(1)ARK 76.073 0.028912 3115300 3698.8 3091.1 2644.8 3432.5 1589.5 2005.1 3490.3 4257.5 313.81 1966.9 TRUE FALSE 3384.197637 2889.868828 2465.278345 3696.871745 1526.186849 2118.627029 3257.468455 4220.277126 346.4316725 2210.574421 1.530913234 1.307293163 1.115220696 1.672357967 0.690402836 0.958405656 1.473584614 1.909131439 0.156715679 1 11.11020559 -1.522878745 0.156351993 0.945391862 2.787260664 0.093381261 0.463742769 211.7820389 2.156275496 1.48599393 89.29940964 0.03 1.522878745 1.841868802 IAVHCTVR ddPTM_A459_MK2206_30min_R2 1 IAVHCTVR 8 0 P62913;Q5VVC8;P62913-2 P62913 RPL11 60S ribosomal protein L11 0 87.696 0.045113 4249400 23085 43111 39168 51800 56886 71651 52862 31096 61228 35355 FALSE TRUE 24852.40535 40970.17043 40473.84157 47567.7743 54652.36981 74377.72901 45921.1559 35160.35397 66553.50077 34201.36925 0.726649427 1.19791024 1.183398281 1.39081491 1.597958533 2.174700331 1.342670101 1.028039366 1.945930886 1 15.06176646 -4.880283149 0.996174416 1.525000031 0.462138401 0.308818957 0.349107725 2.125335494 1.886365976 0.119564654 2.345563133 1.32E-05 4.880283149 -1.062861631 IAVHPDYQGMGYGSR ddPTM_A459_MK2206_30min_R1 1 IAVHPDYQGMGYGSR 15 0 A0A087WV29;Q9H0A0-2;Q9H0A0 A0A087WV29 NAT10 N-acetyltransferase 10 0 130.2 0.016364 8958700 1980.4 1829.7 2071.7 1776.3 2215 1897.8 2085.2 1786.3 1557.8 1421.1 FALSE TRUE 1811.956581 1710.586197 1931.078776 1913.110934 2126.77186 2005.251796 1946.100113 1770.682567 1719.738885 1597.156597 1.134488994 1.071019711 1.209072911 1.197823017 1.331598833 1.25551358 1.218477961 1.108646811 1.076750325 1 10.64129006 -8.158822206 1.779852901 1.015165427 1.204138337 0.504340577 0.06662759 0.33587728 1.90668928 0.069473483 0.021322796 6.94E-09 8.158822206 0.18897291 ICDECNYGSYQGR ddPTM_A459_MK2206_30min_R1 1 ICDECNYGSYQGR 13 0 Q7RTV0 Q7RTV0 PHF5A PHD finger-like domain-containing protein 5A 0 150.09 0.0040042 0 2948 2863.3 3055.3 2235.7 3056.1 2655.5 2780.1 2437.2 2491.1 2843.1 FALSE TRUE 2697.257119 2676.89865 2847.914749 2407.894001 2934.369066 2805.852115 2594.644602 2415.891817 2750.058759 3195.324692 0.844126147 0.837754816 0.891275542 0.753567863 0.918332047 0.878111737 0.812012816 0.756070838 0.860650802 1 11.64174682 -12.13484902 1.772242216 2.964610273 0.83831856 0.472918878 0.050953128 1790831.18 78104.73387 14142085.91 0.013821224 7.33E-13 12.13484902 -2.126291713 ICDECNYGSYQGR ddPTM_A459_MK2206_30min_R2 1 ICDECNYGSYQGR 13 0 Q7RTV0 Q7RTV0 PHF5A PHD finger-like domain-containing protein 5A 0 122.7 0.022635 0 5075.5 8014.7 6378.1 9915 8494 9271 8406.8 6483.5 6215 5007 FALSE TRUE 5464.084182 7616.701652 6590.742671 9104.912783 8160.482881 9623.814401 7302.977062 7330.915711 6755.569466 4843.622 1.128098803 1.572521896 1.360705412 1.879773604 1.684789375 1.986904511 1.507751237 1.513519369 1.394735069 1 12.24187057 -8.658341527 1.377475924 1.002702501 1.605460781 0.372949515 0.229458518 0.668368353 2.612055282 0.227276496 0.06776202 2.20E-09 8.658341527 0.60275828 ICDQISDAVLDAHLQQDPDAK ddPTM_A459_MK2206_30min_R2 1 ICDQISDAVLDAHLQQDPDAK 21 0 P31153 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 0 148.69 3.36E-06 3725500 21924 22224 23241 24277 20894 18295 22862 22489 17845 23194 FALSE TRUE 23602.5183 21120.38848 24015.84334 22293.49144 20073.59658 18991.22904 19860.19194 25428.38952 19397.12584 22437.18168 1.051937745 0.941312005 1.070359178 0.993595887 0.894657665 0.846417759 0.88514646 1.133314775 0.864508124 1 14.45360385 -6.056431138 7.513890166 0.937280657 1.016293628 0.173101765 0.083826983 0.538458909 64.05657694 0.025317531 0.033015462 8.78E-07 6.056431138 0.079012971 ICDQWDALGS(ph)LTHSR ddPTM_A459_MK2206_30min_R1 1 ICDQWDALGSLTHSR 15 0 O43707;O43707-2;F5GXS2;O43707-3 O43707 ACTN4 Alpha-actinin-4 1 ICDQWDALGS(0.991)LT(0.009)HS(0.001)R 92.289 0.009034 3755700 1810.4 1758.8 1876.1 1518.7 2236.3 1814 2175.2 1798.8 1481.7 1928.3 TRUE FALSE 1656.415973 1644.3018 1748.755559 1635.670537 2147.223436 1916.707112 2030.096377 1783.073281 1635.728017 2167.192362 0.764314235 0.758724435 0.806922168 0.754741741 0.990785808 0.884419466 0.936740279 0.822757275 0.754768264 1 11.0816115 -6.231477934 24.96408198 0.890616528 0.772839577 0.439380974 0.069989387 731.151893 609200.7009 0.021109015 0.027247978 5.87E-07 6.231477934 -0.117776951 ICDQWDALGSLT(ph)HSR ddPTM_A459_MK2206_30min_R1 1 ICDQWDALGSLTHSR 15 0 O43707;O43707-2;F5GXS2;O43707-3 O43707 ACTN4 Alpha-actinin-4 1 ICDQWDALGS(0.436)LT(0.543)HS(0.021)R 113.49 0.0037276 2432500 1084.4 1088.4 1169.2 1137.9 1385.1 1245.8 1511.3 1130 1309.3 1209 TRUE FALSE 992.1660856 1017.544962 1089.837962 1225.541255 1329.928534 1316.336119 1410.483935 1120.120529 1445.40642 1358.780047 0.730188883 0.748866576 0.802070919 0.90194234 0.978766605 0.968763209 1.038051697 0.824357505 1.06375305 1 10.40809622 -5.760814541 1.674849404 0.973898343 0.735162608 0.73313973 0.059682138 0.188679789 1.075215886 0.018196382 0.039110205 1.73E-06 5.760814541 -0.238735735 ICDQWDALGSLTHSR ddPTM_A459_MK2206_30min_R1 2 ICDQWDALGSLTHSR 15 0 O43707;O43707-2;F5GXS2;O43707-3 O43707 ACTN4 Alpha-actinin-4 0 ; 165.58 0.00011992 53459000 6964.1 4292.6 5418.5 3805.4 8730.3 7732.2 7651.6 6597 4158.9 3823.8 FALSE TRUE 6371.766725 4013.15096 5050.707317 4098.492567 8382.553664 8169.990482 7141.175725 6539.323125 4591.232538 4297.521212 1.482660913 0.933829238 1.17526059 0.953687571 1.950555506 1.901093695 1.661696446 1.521649993 1.068344357 1 12.06928905 -6.243648502 24.99761376 1.569723031 1.124671762 0.241821252 0.32217185 1067.99647 1500620.811 0.096495818 0.124295732 5.71E-07 6.243648502 -0.445051268 ICDQWDALGSLTHSR ddPTM_A459_MK2206_30min_R2 2 ICDQWDALGSLTHSR 15 0 O43707;O43707-2;F5GXS2;O43707-3 O43707 ACTN4 Alpha-actinin-4 0 ; 100.58 0.010536 23975000 57266 109877 83498 146760 138451 157221 137847 97659 130197 93281 FALSE TRUE 61650.32899 104420.668 86281.78165 134769.2385 133014.7181 163204.1553 119747.5233 110423.3666 141521.2997 90237.24861 0.683202668 1.157179209 0.956165918 1.493498978 1.474055561 1.80861183 1.327029859 1.223700504 1.568324632 1 16.46143546 -5.75734461 24.97958546 1.438294265 0.954682116 0.478752086 0.228825249 87.08921712 531266.8242 0.061774275 0.102218633 1.75E-06 5.75734461 -0.483612149 ICLS(ph)LGR ddPTM_A459_MK2206_30min_R1 1 ICLSLGR 7 0 Q504Y2 Q504Y2 PKDCC Extracellular tyrosine-protein kinase PKDCC 1 ICLS(1)LGR 114.67 0.013603 8410600 330.43 241.78 223.16 282.09 376.49 314.75 306.72 350.96 187.84 191.69 TRUE FALSE 302.3251933 226.0400781 208.012521 303.8166207 361.4936061 332.570873 286.2592684 347.8915937 207.3666402 215.4380044 1.403304836 1.049211715 0.965533085 1.410227604 1.677947246 1.543696406 1.328731527 1.614810696 0.962535096 1 7.751128961 -4.432974029 21.82550842 1.313280684 9.655923485 0.007076991 0.264283741 3706.723788 890516.6057 0.066747689 15955.73811 3.69E-05 4.432974029 8.342642801 ICNGGLS(ph)PGNPGDSK ddPTM_A459_MK2206_30min_R1 1 ICNGGLSPGNPGDSK 15 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 ICNGGLS(0.989)PGNPGDS(0.011)K 133.32 0.00054805 6358100 3379.5 3026 3172.8 2536.3 2752.2 2592.3 2870 2984.5 2939.7 3182 TRUE FALSE 3092.055779 2829.00685 2957.439176 2731.646265 2642.574046 2739.073786 2678.547537 2958.406831 3245.292335 3576.210183 0.864618023 0.791062803 0.826975772 0.763838289 0.738931414 0.765915214 0.748990523 0.827246353 0.907466891 1 11.80421581 -8.406995666 1.92469458 0.997405828 0.784243613 0.785532189 0.036036338 0.146068111 1.128282442 0.036404208 0.010378344 3.92E-09 8.406995666 -0.213162215 ICNGGLS(ph)PGNPGDSK ddPTM_A459_MK2206_30min_R2 1 ICNGGLSPGNPGDSK 15 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 ICNGGLS(0.998)PGNPGDS(0.002)K 125.39 0.0012338 22714000 66636 73880 77274 71339 76784 63926 82788 65059 68139 83318 TRUE FALSE 71737.70339 70211.22663 79850.27659 65510.3755 73769.07435 66358.74873 71917.83615 73562.43468 74065.60705 80599.34048 0.890053231 0.871114158 0.990706327 0.812790466 0.915256551 0.823316274 0.892288147 0.912692762 0.918935646 1 16.29848041 -8.720721477 1.205051617 0.999409489 0.885591722 0.349794145 0.046590926 0.846668703 2.405252396 0.043018155 0.013232396 1.90E-09 8.720721477 -0.113817767 ICNGGLSPGNPGDS(ph)K ddPTM_A459_MK2206_30min_R1 1 ICNGGLSPGNPGDSK 15 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 ICNGGLS(0.347)PGNPGDS(0.653)K 186.05 2.20E-05 7729700 2118.2 1870.9 2042.9 1566.2 1748.4 1584.1 1723.5 1896 1849.7 1899.8 TRUE FALSE 1938.035967 1749.10407 1904.23364 1686.828995 1678.757526 1673.790373 1608.52846 1879.423472 2041.982934 2135.161567 0.907676495 0.819190499 0.891845221 0.790024053 0.786243791 0.783917432 0.753352104 0.880225413 0.956359915 1 11.06012953 -8.19863421 2.633016233 0.990431989 0.818053714 0.646888069 0.046657144 0.181589851 2.271094241 0.043691177 0.013071195 6.33E-09 8.19863421 -0.172378275 ICNGGLSPGNPGDS(ph)K ddPTM_A459_MK2206_30min_R2 1 ICNGGLSPGNPGDSK 15 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 ICNGGLS(0.021)PGNPGDS(0.979)K 105.98 0.004599 30094000 44287 49542 54735 47075 46372 39259 51155 37382 42863 53801 TRUE FALSE 47677.64677 47081.81632 56559.83758 43228.82191 44551.20228 40753.02876 44438.28705 42267.95575 46591.14626 52045.47778 0.916076647 0.904628381 1.086738752 0.830597081 0.856005251 0.783027277 0.853835702 0.812135032 0.895200664 1 15.66748519 -5.818611943 24.9999975 0.84989175 0.962698973 0.309544571 0.071999205 84.93604625 37139.63494 0.019393887 0.028765806 1.52E-06 5.818611943 0.112807223 ICSSATET(ph)YK ddPTM_A459_MK2206_30min_R1 1 ICSSATETYK 10 0 Q8NF91;Q8NF91-4;A0A0C4DG40;E7ENN3;Q8NF91-6;Q8NF91-10;Q8NF91-7 Q8NF91 SYNE1 Nesprin-1 1 ICSSAT(0.022)ET(0.637)Y(0.341)K 104.44 0.030762 5689300 1130.7 1156.8 1290.7 914.5 1139.2 1151.1 1088.5 896.01 1118.5 885.34 TRUE FALSE 1034.528027 1081.49211 1203.09088 984.9349485 1093.823252 1216.274287 1015.888151 888.176279 1234.772078 995.0226032 1.039703042 1.086902053 1.209109096 0.989861884 1.099294879 1.22235845 1.020969924 0.892619199 1.240948772 1 9.958585488 -14.52287874 0.181151172 0.649406342 1.103311801 0.046263708 0.106087109 457.2561947 4.397889725 57.76716574 0.323949855 3.00E-15 14.52287874 0.453905458 ICT(ph)LPEK ddPTM_A459_MK2206_30min_R1 2 ICTLPEK 7 0 Q658Y4;E7ER68;G3V120 Q658Y4 FAM91A1 Protein FAM91A1 1 ICT(1)LPEK;ICT(1)LPEK 126.24 0.013487 68967000 10708 12818.4 11352.6 10679.6 10163 9025.1 10803.9 11167.9 6231.3 9343.9 TRUE FALSE 9797.22837 11983.91983 10582.01714 11502.14464 9758.186189 9536.093363 10083.19154 11070.26023 6879.065934 10501.49287 0.932936725 1.141163449 1.007667888 1.095286621 0.929218951 0.90807026 0.960167441 1.054160619 0.655056002 1 13.35830681 -6.283211268 18.12759295 0.922120237 1.048570816 0.238020655 0.110597771 35.67982274 29706.46535 0.032701951 0.037201615 5.21E-07 6.283211268 0.126450579 ICTEQSNS(ph)PPPIR ddPTM_A459_MK2206_30min_R1 4 ICTEQSNSPPPIR 13 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 ICT(0.002)EQS(0.215)NS(0.783)PPPIR;ICTEQS(0.07)NS(0.93)PPPIR;ICTEQS(0.002)NS(0.998)PPPIR;ICTEQSNS(1)PPPIR 167.03 0.00031671 52094300 6455.2 6407.9 7188 5409.9 6440.1 5829.6 6479.3 6003.4 6064.1 6244.3 TRUE FALSE 5906.151342 5990.744545 6700.098587 5826.571435 6183.57718 6159.666914 6047.077719 5950.912907 6694.484896 7017.891026 0.841584932 0.853638867 0.954716818 0.830245356 0.881116158 0.877709114 0.861665947 0.847963139 0.953916906 1 12.77682183 -8.440868128 3.777182922 0.998986362 0.870390315 0.647494113 0.032740774 0.127511956 3.343236823 0.031022377 0.008174814 3.62E-09 8.440868128 -0.128596047 ICTEQSNS(ph)PPPIR ddPTM_A459_MK2206_30min_R2 4 ICTEQSNSPPPIR 13 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 ICTEQS(0.008)NS(0.991)PPPIR;ICTEQS(0.001)NS(0.999)PPPIR;ICT(0.001)EQS(0.029)NS(0.97)PPPIR;ICT(0.001)EQS(0.125)NS(0.875)PPPIR 167.03 0.00031671 83453000 73935 75385 83185 83022 79119 79899 75871 63660 68119 74165 TRUE FALSE 79595.52045 71641.49052 85958.34638 76238.83703 76012.39052 82939.61243 65909.04656 71980.58058 74043.86749 71745.00212 1.109422512 0.998557229 1.19810919 1.062636208 1.05947994 1.156033312 0.918656974 1.003283552 1.032042167 1 16.13059071 -7.258717884 24.99853057 0.988769304 1.094158987 0.459976831 0.057730537 227.7817773 2092326.353 0.022294262 0.016470868 5.51E-08 7.258717884 0.105389683 ICTEQSNS(ph)PPPIRR ddPTM_A459_MK2206_30min_R1 2 ICTEQSNSPPPIRR 14 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 ICT(0.001)EQS(0.13)NS(0.87)PPPIRR;ICTEQS(0.033)NS(0.967)PPPIRR 105.99 0.010172 12229000 2727.9 2450.38 2973.5 3014.9 3991.1 3070 3079.4 2838.3 2122.4 1782.13 TRUE FALSE 2495.87778 2290.859817 2771.667105 3247.10812 3832.126036 3243.820747 2873.978845 2813.485042 2343.031075 2002.913719 1.246123463 1.143763606 1.383817525 1.621192211 1.913275644 1.619550916 1.434898976 1.404696076 1.169811287 1 10.96788456 -8.348428062 1.786432625 1.002659574 1.491274749 0.388101475 0.201570367 0.406757475 2.584539781 0.222441918 0.064804983 4.48E-09 8.348428062 0.488615175 ICTEQSNS(ph)PPPIRR ddPTM_A459_MK2206_30min_R2 1 ICTEQSNSPPPIRR 14 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 ICTEQS(0.017)NS(0.983)PPPIRR 93.181 0.0075788 15893000 20784 32564 31048 36937 42763 26117 29941 18476 29567 38266 TRUE FALSE 22375.23902 30946.91911 32083.12482 33919.12894 41083.90975 27110.90074 26009.71073 20890.87664 32138.68422 37017.38355 0.604452203 0.83601044 0.866704282 0.916302712 1.109854501 0.732382955 0.702635039 0.56435314 0.868205182 1 15.17591531 ICTLPSPPS(ph)PLASLAPVADSSTR ddPTM_A459_MK2206_30min_R1 2 ICTLPSPPSPLASLAPVADSSTR 23 0 Q9UER7-3;Q9UER7;Q9UER7-2 Q9UER7-3 DAXX Death domain-associated protein 6 1 ICTLPS(0.001)PPS(0.998)PLASLAPVADSSTR;ICTLPS(0.007)PPS(0.993)PLASLAPVADSSTR 117.83 7.10E-06 15517400 10561 10568 10384.5 8493.1 11179.5 9058.3 9895 9816.6 8960.4 8558.1 TRUE FALSE 9662.731492 9880.021279 9679.629073 9147.240034 10734.19684 9571.173118 9234.922604 9730.774501 9891.865645 9618.342038 1.004615084 1.027206273 1.006371892 0.951020456 1.116013217 0.995095941 0.96013664 1.011689381 1.028437708 1 13.23157252 ICTLPSPPS(ph)PLASLAPVADSSTR ddPTM_A459_MK2206_30min_R2 2 ICTLPSPPSPLASLAPVADSSTR 23 0 Q9UER7-3;Q9UER7;Q9UER7-2 Q9UER7-3 DAXX Death domain-associated protein 6 1 ICTLPS(0.001)PPS(0.999)PLASLAPVADSSTR;ICT(0.001)LPS(0.034)PPS(0.962)PLAS(0.001)LAPVADS(0.001)S(0.001)T(0.001)R 100.12 3.26E-05 9938200 51070 65385 64633 66926 59152 59072 61339 50737 52164 59271 TRUE FALSE 54979.95847 62138.07598 66787.83196 61457.93171 56829.39527 61320.02635 53285.11562 57368.50011 56701.13043 57336.99212 0.958891571 1.083734491 1.164829711 1.071872267 0.991147131 1.069467094 0.929332245 1.000549523 0.988910097 1 15.8071786 -6.653894941 1.473786591 0.985294827 1.07442842 0.269728305 0.056918246 0.516697815 2.330835249 0.025429164 0.025219394 2.22E-07 6.653894941 0.089133593 IDAGTMAEPSAS(ph)PSK ddPTM_A459_MK2206_30min_R1 1 IDAGTMAEPSASPSK 15 0 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 IDAGTMAEPS(0.076)AS(0.899)PS(0.025)K 230.96 6.21E-14 13748000 2999.1 3269.2 2910.7 3089.3 2638.4 2172.5 2056.2 2848.9 2795.2 2581.8 TRUE FALSE 2744.010796 3056.374486 2713.129794 3327.238421 2533.306941 2295.505073 1919.03465 2823.992368 3085.771043 2901.652876 0.945671627 1.053321888 0.935029071 1.146670041 0.873056513 0.791102579 0.66135914 0.973235769 1.063452858 1 11.50265922 -6.315987727 23.98807682 0.875615757 1.016459281 0.202436404 0.11970559 304.4797216 133896.3797 0.039102743 0.044338377 4.83E-07 6.315987727 0.140843524 IDAGTMAEPSAS(ph)PSK ddPTM_A459_MK2206_30min_R2 3 IDAGTMAEPSASPSK 15 0 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 IDAGTMAEPSAS(0.994)PS(0.006)K;IDAGTMAEPS(0.001)AS(0.997)PS(0.003)K;IDAGTMAEPS(0.017)AS(0.969)PS(0.013)K 184.99 2.12E-05 34359400 129289 124385 122648 122431 122588 101930 148286 118176 110902 148100 TRUE FALSE 139187.4652 118208.2218 126737.0231 112427.9957 117774.5792 105809.0176 128815.8701 133622.009 120548.0555 143267.5091 0.971521499 0.825087436 0.88461804 0.784741749 0.822060632 0.738541615 0.899128287 0.932674894 0.841419358 1 17.12835194 -10.54053122 5.151164654 1.000001284 0.85253627 0.302248512 0.065708757 9.93E-07 1.89E-07 0.065230636 0.015820615 2.88E-11 10.54053122 -0.147465013 IDASKNEEDEGHS(ph)NSSPR ddPTM_A459_MK2206_30min_R1 1 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IDASKNEEDEGHS(0.589)NS(0.094)S(0.317)PR 110.32 0.0065802 9233500 2387.3 2411.1 2661.3 2636.3 2847.8 2568.7 2200.9 2740.2 1817.2 1111.7 TRUE FALSE 2184.247599 2254.136952 2480.658371 2839.348283 2734.366096 2714.137574 2054.081977 2716.24272 2006.104443 1249.425789 1.748201148 1.804138326 1.985438745 2.272522552 2.188498205 2.17230795 1.644020793 2.173992841 1.605621127 1 10.2870495 -8.572102161 3.605612754 1.000604007 1.999476945 0.704077345 0.200356003 0.145852636 5.376399791 0.204060378 0.05373094 2.68E-09 8.572102161 0.998872937 IDASKNEEDEGHS(ph)NSSPR ddPTM_A459_MK2206_30min_R2 1 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IDAS(0.001)KNEEDEGHS(0.708)NS(0.146)S(0.146)PR 48.405 0.045284 177330000 62667 110840 86088 114350 138030 82918 119380 88628 111720 97039 TRUE FALSE 67464.8337 105335.8468 88958.13095 105007.2392 132610.2487 86073.50259 103705.2626 100211.9839 121437.2037 93872.62538 0.71868485 1.122114635 0.947647204 1.118614067 1.412661552 0.916918029 1.104744458 1.067531493 1.293638089 1 16.51841689 -4.363794275 1.715629739 1.117471894 5.22E-22 0.389047569 0.144221502 3.784657685 4.2325212 0.038909022 9.921730387 4.33E-05 4.363794275 -1.117471894 IDASKNEEDEGHSNS(ph)SPR ddPTM_A459_MK2206_30min_R1 5 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IDASKNEEDEGHS(0.23)NS(0.385)S(0.385)PR;IDASKNEEDEGHS(0.093)NS(0.897)S(0.01)PR;IDASKNEEDEGHS(0.003)NS(0.854)S(0.143)PR;IDASKNEEDEGHS(0.004)NS(0.98)S(0.017)PR;IDASKNEEDEGHS(0.017)NS(0.801)S(0.183)PR 240.34 2.31E-24 336534400 14365.27 14233.12 15253.09 14316.43 14688.78 12409.5 12100.57 14878.88 9209.85 5974.81 TRUE FALSE 13143.42835 13306.5413 14217.75275 15419.08392 14103.69479 13112.11517 11293.36305 14748.79552 10167.24687 6715.01457 1.957319409 1.98161019 2.117307803 2.296210047 2.100322291 1.952656249 1.681807677 2.196390695 1.514106449 1 12.71317481 -8.828906238 0.746699273 0.983629753 2.072583204 0.774942106 0.174134242 0.535694349 0.578277121 0.180598034 0.064272759 1.48E-09 8.828906238 1.088953451 IDASKNEEDEGHSNS(ph)SPR ddPTM_A459_MK2206_30min_R2 1 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IDASKNEEDEGHS(0.321)NS(0.34)S(0.34)PR 47.75 0.04695 504260000 57232 116920 87084 113540 132800 89032 115930 86674 105140 86227 TRUE FALSE 61613.72592 111113.9228 89987.3371 104263.4188 127585.6047 92420.17515 100708.2517 98002.5894 114284.8872 83413.42005 0.738654834 1.332086884 1.078811264 1.249959764 1.52955729 1.107977291 1.207338719 1.174901944 1.370101922 1 16.34799189 -4.754501554 24.99772481 1.234398491 0.738653982 0.500326171 0.146534573 196.3863903 707539.0686 0.035249621 0.34086989 1.76E-05 4.754501554 -0.49574451 IDASKNEEDEGHSNSS(ph)PR ddPTM_A459_MK2206_30min_R1 6 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IDASKNEEDEGHSNS(0.242)S(0.758)PR;IDASKNEEDEGHS(0.001)NS(0.237)S(0.762)PR;IDASKNEEDEGHS(0.008)NS(0.244)S(0.747)PR;IDASKNEEDEGHS(0.005)NS(0.262)S(0.732)PR;IDASKNEEDEGHS(0.001)NS(0.247)S(0.752)PR;IDASKNEEDEGHS(0.019)NS(0.257)S(0.724)PR 148.19 0.00011038 399591600 18607.5 21637.4 22391.6 21719.3 19545.4 15071.36 15645.28 18911.1 13785.11 9885.04 TRUE FALSE 17024.83441 20228.80133 20871.72058 23392.12425 18766.86533 15924.68738 14601.61192 18745.76225 15218.12151 11109.67338 1.532433387 1.820827726 1.878697947 2.105563633 1.689236459 1.433407341 1.314315139 1.687336936 1.369808183 1 13.43952878 -6.666827751 3.579118602 1.398202638 1.842152338 0.543663889 0.205087725 0.197345339 4.91736439 0.071258377 0.070059979 2.15E-07 6.666827751 0.4439497 IDASKNEEDEGHSNSS(ph)PR ddPTM_A459_MK2206_30min_R2 2 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IDASKNEEDEGHS(0.211)NS(0.211)S(0.579)PR;IDASKNEEDEGHS(0.001)NS(0.352)S(0.648)PR 119.5 0.00053561 180733000 22895 52605 50084 57238 58477 45679 56759 42749 57828 38574 TRUE FALSE 24647.8588 49992.71219 51753.77556 52561.4723 56180.89916 47417.34635 49306.47512 48336.44108 62857.77491 37315.33354 0.660528969 1.339736442 1.386930536 1.408575707 1.505571405 1.270720153 1.321346225 1.295350637 1.684502561 1 15.18748096 -4.761288838 5.616909213 1.371684893 0.627945872 0.613797013 0.165553541 0.090539979 9.475263184 0.038379058 0.26153959 1.73E-05 4.761288838 -0.74373902 IDASKNEEDEGHSNSSPR ddPTM_A459_MK2206_30min_R1 2 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 0 ; 110.04 0.0011194 17423100 11444 9611.6 10553.7 9045.6 13019.6 10106.2 9898.1 11402.4 6106 3887.2 FALSE TRUE 10470.62771 8985.883093 9837.344248 9742.293679 12501.00176 10678.40431 9237.815809 11302.71002 6740.740551 4368.775683 2.396696115 2.056842407 2.25173938 2.229982582 2.861442809 2.444255573 2.114509071 2.587157327 1.542935834 1 12.09301332 -8.463946786 3.57608179 1.006453154 2.3576179 0.802135586 0.225168104 0.089503675 2.363279848 0.225735834 0.059619728 3.44E-09 8.463946786 1.351164746 IDDRDS(ph)DEEGASDR ddPTM_A459_MK2206_30min_R1 3 IDDRDSDEEGASDR 14 1 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 IDDRDS(1)DEEGASDR;IDDRDS(0.994)DEEGAS(0.006)DR;IDDRDS(0.973)DEEGAS(0.027)DR 209.33 2.50E-05 14701500 2629.59 2730.9 2804.19 2500.28 2880.3 2465.89 2597.99 2565.97 2641.73 2316.97 TRUE FALSE 2405.929562 2553.117914 2613.849396 2692.851999 2765.571552 2605.506561 2424.682827 2543.535995 2916.347287 2604.013736 0.92393121 0.980454856 1.003777115 1.034115896 1.062041845 1.000573278 0.931132887 0.976775184 1.119943127 1 11.34652134 -4.812881675 1.853413572 1.014193088 0.89909804 0.264470968 0.047563564 1.184357559 4.504270503 0.013649601 0.235231081 1.54E-05 4.812881675 -0.115095048 IDDRDS(ph)DEEGASDR ddPTM_A459_MK2206_30min_R2 1 IDDRDSDEEGASDR 14 1 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 IDDRDS(0.949)DEEGAS(0.051)DR 162.26 0.0013149 3490800 11061 13546 17216 12668 14164 11403 16627 13667 10726 11955 TRUE FALSE 11907.83866 12873.32534 17789.97285 11632.98388 13607.85019 11836.94916 14443.85493 15453.32383 11658.92809 11564.90933 1.029652574 1.113136729 1.53827171 1.005886302 1.176649968 1.023522867 1.248938017 1.336225247 1.008129658 1 13.49746633 IDEDGENTQIEDTEPMS(ph)PVLNSK ddPTM_A459_MK2206_30min_R1 6 IDEDGENTQIEDTEPMSPVLNSK 23 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 IDEDGENTQIEDTEPMS(0.977)PVLNS(0.022)K;IDEDGENTQIEDT(0.119)EPMS(0.876)PVLNS(0.004)K;IDEDGENTQIEDTEPMS(0.999)PVLNS(0.001)K;IDEDGENT(0.01)QIEDT(0.12)EPMS(0.867)PVLNS(0.003)K;IDEDGENTQIEDTEPMS(1)PVLNSK;IDEDGENTQIEDTEPMS(1)PVLNSK 221.42 6.68E-27 105965000 16469.09 16437.65 16529.53 13910.39 16031.09 12884.99 15828.6 15211.71 14704.91 13775.81 TRUE FALSE 15068.30741 15367.556 15407.55156 14981.77065 15392.53774 13614.527 14772.70297 15078.71562 16233.53802 15482.46134 0.973250123 0.992578354 0.995161636 0.967660782 0.994191905 0.87935159 0.954157265 0.973922381 1.048511451 1 13.91834722 -8.146749558 5.898796611 1.023543434 0.96528248 0.325241397 0.033539399 0.276423018 12.12570847 0.024827366 0.009109821 7.13E-09 8.146749558 -0.058260955 IDEDGENTQIEDTEPMS(ph)PVLNSK ddPTM_A459_MK2206_30min_R2 4 IDEDGENTQIEDTEPMSPVLNSK 23 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 IDEDGENTQIEDTEPMS(0.985)PVLNS(0.015)K;IDEDGENTQIEDTEPMS(0.999)PVLNS(0.001)K;IDEDGENTQIEDTEPMS(0.999)PVLNS(0.001)K;IDEDGENTQIEDTEPMS(0.999)PVLNS(0.001)K 182.23 1.07E-16 24161700 146272 184698 167780 182083 175357 132706 183444 139468 135264 159632 TRUE FALSE 157470.6968 175526.1659 173373.7015 167206.2364 168471.6031 137756.2198 159357.5824 157696.9465 147029.0182 154423.2209 1.01973457 1.136656552 1.122717817 1.082779102 1.090973249 0.892069334 1.031953494 1.021199697 0.952117287 1 17.23653018 -6.656215454 11.16142202 0.984124061 1.094876292 0.585324777 0.04661471 0.276248848 27.36619781 0.015140107 0.01513622 2.21E-07 6.656215454 0.110752231 IDENS(ph)DKEMEVEESPEK ddPTM_A459_MK2206_30min_R1 1 IDENSDKEMEVEESPEK 17 1 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 IDENS(1)DKEMEVEESPEK 78.354 0.010384 9423700 2301.7 2755.4 3130.3 2131.8 1128.4 1539.3 2293.1 1886.7 3228.2 3615.9 TRUE FALSE 2105.928328 2576.022959 2917.823958 2295.991605 1083.453439 1626.453836 2140.131483 1870.204781 3563.782942 4063.864991 0.518208241 0.633884975 0.717992346 0.564977333 0.266606652 0.400223393 0.526624651 0.460203473 0.876944227 1 11.98863676 -8.371962969 3.851935842 0.992073569 0.51243146 0.682884333 0.117525148 0.146372043 3.608949576 0.127677723 0.033889078 4.25E-09 8.371962969 -0.479642108 IDEPLEGSEDR ddPTM_A459_MK2206_30min_R1 2 IDEPLEGSEDR 11 0 P61978;P61978-2;P61978-3;S4R359 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 163.38 0.0088307 47659000 4581.8 4783.7 4442.8 4224.2 4250.6 3434.5 4672.1 4433 3998 3931.6 FALSE TRUE 4192.09385 4472.280261 4141.235114 4549.548616 4081.289601 3628.958422 4360.432734 4394.242748 4413.606407 4418.67629 0.948721648 1.012131228 0.937211699 1.029617994 0.923645303 0.821277275 0.986818777 0.994470393 0.998852624 1 12.10939853 -7.497635593 24.99754256 0.996125873 0.947021577 0.178170532 0.052482209 1486.863684 1472402.323 0.023705426 0.015907657 3.18E-08 7.497635593 -0.049104297 IDEPLEGSEDR ddPTM_A459_MK2206_30min_R2 4 IDEPLEGSEDR 11 0 P61978;P61978-2;P61978-3;S4R359 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ;;; 156.83 0.0076248 225763000 181591 226058 201857 226919 200931 176450 215008 164466 166758 181300 FALSE TRUE 195493.7466 214832.2884 208586.8116 208378.9918 193041.4393 183164.9284 186777.1913 185962.2709 181262.3094 175384.1958 1.114659993 1.224923873 1.189313613 1.188128673 1.100677506 1.044363932 1.064960217 1.06031373 1.03351564 1 17.42015922 -6.460085262 2.577098752 1.045637135 1.183991736 0.816123852 0.030874091 0.11560422 1.517697163 0.010343519 0.011514811 3.47E-07 6.460085262 0.138354601 IDFDSVSSIMASS(ph)Q ddPTM_A459_MK2206_30min_R1 3 IDFDSVSSIMASSQ 14 0 K7EK53;A0A087WVB9;K7ERF1;Q9UBQ5 K7EK53 EIF3K Eukaryotic translation initiation factor 3 subunit K 1 IDFDSVSSIMAS(0.081)S(0.919)Q;IDFDSVSSIMAS(0.09)S(0.91)Q;IDFDSVSSIMAS(0.117)S(0.883)Q 162.31 0.00027663 25856900 9240.2 9167.82 9354.26 8352.13 10216.71 8400.12 10717.53 9772.75 8682.63 7992.44 TRUE FALSE 8454.272468 8570.993252 8719.318894 8995.4125 9809.756806 8875.727535 10002.58313 9687.307877 9585.22046 8982.603807 0.94118283 0.954176922 0.970689466 1.001425944 1.092083879 0.988101861 1.113550519 1.078452093 1.067087079 1 13.13291799 -5.925667103 2.011714208 1.060548865 0.950116831 0.599749819 0.037060691 0.210960767 1.731882996 0.011418734 0.019314993 1.19E-06 5.925667103 -0.110432034 IDFDSVSSIMASS(ph)Q ddPTM_A459_MK2206_30min_R2 1 IDFDSVSSIMASSQ 14 0 K7EK53;A0A087WVB9;K7ERF1;Q9UBQ5 K7EK53 EIF3K Eukaryotic translation initiation factor 3 subunit K 1 IDFDSVSSIMAS(0.016)S(0.984)Q 157.56 0.0003124 4805000 21444 24155 23790 28247 27841 30373 32141 18959 27668 27112 TRUE FALSE 23085.76913 22955.49782 24583.14673 25939.12974 26747.82245 31528.8658 27920.84809 21437.0064 30074.51263 26227.33766 0.880217788 0.875250783 0.937310033 0.989011164 1.019845125 1.202137487 1.064570429 0.817353506 1.146685684 1 14.67878375 -5.726381672 1.769872846 1.040342152 0.877214355 0.325422644 0.095005469 0.457850076 2.909947176 0.030837955 0.066986584 1.88E-06 5.726381672 -0.163127797 IDFSSIAVPGTS(ph)SPR ddPTM_A459_MK2206_30min_R1 2 IDFSSIAVPGTSSPR 15 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 IDFSSIAVPGT(0.027)S(0.595)S(0.378)PR;IDFSSIAVPGT(0.145)S(0.717)S(0.138)PR 160.87 0.00012531 111231000 14613.9 13405.4 13322.8 10905.6 13377.1 11708.7 12476 11415 11145.6 9930.2 TRUE FALSE 13370.91106 12532.70602 12418.48546 11745.5512 12844.26178 12371.63648 11643.7488 11315.19986 12304.225 11160.42815 1.198064348 1.12295925 1.112724825 1.05242837 1.150875362 1.108527049 1.043306641 1.013867901 1.102486826 1 13.44610475 -1.522878745 0.14127915 0.987809908 1.622572297 0.576293468 0.038493354 57.67569211 0.543687411 0.167453638 7.403572897 0.03 1.522878745 0.634762388 IDFSSIAVPGTSS(ph)PR ddPTM_A459_MK2206_30min_R2 2 IDFSSIAVPGTSSPR 15 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 IDFSSIAVPGTS(0.006)S(0.994)PR;IDFSSIAVPGT(0.007)S(0.141)S(0.852)PR 220.25 2.16E-09 52643000 231246 226671 194441 220446 216172 209028 226514 140336 182274 187645 TRUE FALSE 248950.3716 215414.8478 200923.5659 202434.8566 207684.0011 216982.707 196772.4397 158678.397 198127.863 181522.159 1.371459952 1.186713781 1.106881755 1.115207409 1.144124785 1.19535107 1.084013328 0.874154417 1.091480314 1 17.46978615 -1.522878745 0.265476293 0.998486431 3.210545404 0.594765225 0.078222365 39.79207005 0.552878711 0.100565545 40.10045676 0.03 1.522878745 2.212058973 IDFYFDENPYFENK ddPTM_A459_MK2206_30min_R1 2 IDFYFDENPYFENK 14 0 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105 Q01105-2;Q01105 SET;SETSIP Protein SET;Protein SETSIP 0 ; 159.58 0.0041165 19872800 4721.6 5459.8 5316.8 5107.7 5029.9 5100.2 4993.6 4831.3 3762.7 4594.8 FALSE TRUE 4320.003126 5104.366028 4955.910429 5501.095939 4829.548432 5388.968916 4660.486055 4789.060453 4153.84613 5164.038513 0.836555172 0.988444609 0.959696644 1.065270122 0.935227036 1.043557073 0.902488632 0.927386665 0.804379386 1 12.33428404 -9.991130765 5.216521695 0.999999992 0.947384906 0.043729488 0.077640657 20218765.36 64527610.47 0.238012415 0.019439708 1.02E-10 9.991130765 -0.052615086 IDGATQS(ph)SPAEPK ddPTM_A459_MK2206_30min_R2 4 IDGATQSSPAEPK 13 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 IDGAT(0.003)QS(0.498)S(0.498)PAEPK;IDGAT(0.03)QS(0.485)S(0.485)PAEPK;IDGAT(0.005)QS(0.498)S(0.498)PAEPK;IDGAT(0.005)QS(0.497)S(0.497)PAEPK 148.89 0.00053418 394757900 399731 439847 447862 434338 437176 331230 508585 365531 351761 444157 TRUE FALSE 430334.7127 418004.8376 462793.4955 398851.196 420010.2736 343835.1898 441807.1786 413307.1568 382356.5359 429664.1935 1.001560566 0.972864027 1.077105103 0.928285862 0.977531477 0.800241665 1.028261571 0.96193065 0.889896207 1 18.71285003 -5.793632793 24.99373622 0.938600289 1.012745389 0.226817391 0.064302726 280.2723211 217591.4946 0.017795714 0.026397543 1.61E-06 5.793632793 0.0741451 IDGATQSS(ph)PAEPK ddPTM_A459_MK2206_30min_R1 6 IDGATQSSPAEPK 13 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 IDGATQS(0.225)S(0.775)PAEPK;IDGATQS(0.225)S(0.775)PAEPK;IDGATQS(0.226)S(0.774)PAEPK;IDGATQS(0.205)S(0.795)PAEPK;IDGAT(0.01)QS(0.231)S(0.759)PAEPK;IDGAT(0.002)QS(0.207)S(0.79)PAEPK 244.23 2.89E-18 574486000 40037.1 43376.9 45196.3 38379.2 34682.5 29821 35503.9 35743.6 37242.6 33034.9 TRUE FALSE 36631.7344 40553.05593 42128.50108 41335.17263 33301.02258 31509.43925 33135.49961 35431.09747 41114.10154 37127.51281 0.986646603 1.092264277 1.134697638 1.113329968 0.896936532 0.848681661 0.892478303 0.954308403 1.107375594 1 15.18020105 -6.257690594 24.99133259 0.939740491 1.086269817 0.416700637 0.075723704 316.8714595 2112428.239 0.024238085 0.030085013 5.52E-07 6.257690594 0.146529326 IDGATQSS(ph)PAEPK ddPTM_A459_MK2206_30min_R2 3 IDGATQSSPAEPK 13 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 IDGATQS(0.225)S(0.774)PAEPK;IDGAT(0.001)QS(0.028)S(0.971)PAEPK;IDGATQS(0.078)S(0.922)PAEPK 201.72 8.95E-05 205074400 213546 229386 211385 210315 227175 163778 241166 181256 175913 214495 TRUE FALSE 229895.2459 217995.0248 218432.4704 193131.5917 218254.968 170010.6866 209500.6145 204946.7815 191213.5948 207496.0457 1.10795001 1.050598454 1.052706666 0.930772396 1.051851216 0.819344224 1.009660757 0.987714155 0.921528861 1 17.66272432 -5.463467632 1.337553655 0.95703492 1.100161342 0.394323316 0.061796486 0.545518741 1.720556697 0.019120926 0.07543614 3.44E-06 5.463467632 0.143126422 IDHYLGK ddPTM_A459_MK2206_30min_R1 1 IDHYLGK 7 0 P11413-3;P11413;P11413-2;E7EUI8;E9PD92;E7EM57 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 89.55 0.043298 22465000 14887 14183 14673 13136 14692 12849 15218 13416 12248 12490 FALSE TRUE 13620.78248 13259.68412 13677.03764 14147.737 14106.78653 13576.49928 14202.83499 13298.70533 13521.22343 14037.35549 0.970323967 0.944599866 0.9743315 1.007863411 1.004946162 0.967169299 1.011788509 0.947379678 0.963231531 1 13.77698355 -5.515926399 24.39433159 0.985408244 0.957962852 0.227412124 0.020968564 335.6704243 1177793.1 0.005829713 0.010648471 3.05E-06 5.515926399 -0.027445391 IDHYLGK ddPTM_A459_MK2206_30min_R2 1 IDHYLGK 7 0 P11413-3;P11413;P11413-2;E7EUI8;E9PD92;E7EM57 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 91.906 0.038948 23708000 114420 151810 144850 158260 147610 148660 153000 119310 129200 140440 FALSE TRUE 123180.0832 144271.3362 149679.2267 145329.6518 141814.0897 154317.3605 132910.9162 134904.2267 140437.5825 135857.4543 0.906686231 1.061931691 1.101737313 1.069721588 1.043844745 1.135877021 0.978311546 0.992983619 1.033712748 1 17.0517342 -7.361855639 21.17253619 1.000666594 1.056317122 0.164210567 0.057272312 21.62794936 4550.388393 0.024206211 0.016319819 4.35E-08 7.361855639 0.055650528 IDILDSALLRPGR ddPTM_A459_MK2206_30min_R1 2 IDILDSALLRPGR 13 1 P62195-2;P62195 P62195-2 PSMC5 26S protease regulatory subunit 8 0 ; 177.83 0.00029609 6481600 3878.7 3281.4 3451.6 3149.5 3589.5 3804.9 4129.4 3711 3621 2863 FALSE TRUE 3548.796197 3067.780264 3217.315009 3392.075036 3446.522614 4020.33015 3853.935261 3678.555118 3997.415908 3217.690055 1.102901814 0.953410742 0.999883443 1.054195705 1.07111703 1.249446057 1.197733528 1.143228545 1.242324724 1 11.65180965 -6.579212664 5.16893389 1.177250088 1.024682409 0.438347903 0.074357779 0.165729069 9.242886777 0.023730029 0.02392266 2.64E-07 6.579212664 -0.15256768 IDIS(ph)PSTFR ddPTM_A459_MK2206_30min_R1 5 IDISPSTFR 9 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 IDIS(0.993)PS(0.007)TFR;IDIS(0.849)PS(0.147)T(0.004)FR;IDIS(0.992)PS(0.008)TFR;IDIS(0.996)PS(0.004)TFR;IDIS(0.994)PS(0.006)TFR 169.21 0.00071763 3587187000 21944.3 22527.9 20801.4 17923.6 21620.4 20204 22835.5 18525.1 20230 21338.3 TRUE FALSE 20077.82205 21061.32962 19389.45892 19304.07878 20759.21369 21347.93302 21312.18546 18363.137 22332.98089 23981.8497 0.837209069 0.878219565 0.808505564 0.804945366 0.865621874 0.890170412 0.888679803 0.765709786 0.931245136 1 14.54965532 -8.510315869 7.787790953 0.999989554 0.845208507 0.642920018 0.03843519 0.086119825 37.05918314 0.037666056 0.009737622 3.09E-09 8.510315869 -0.154781047 IDIS(ph)PSTFR ddPTM_A459_MK2206_30min_R2 7 IDISPSTFR 9 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 IDIS(0.985)PS(0.015)TFR;IDIS(0.972)PS(0.028)TFR;IDIS(0.924)PS(0.076)TFR;IDIS(0.619)PS(0.278)T(0.103)FR;IDIS(0.992)PS(0.007)T(0.001)FR;IDIS(0.991)PS(0.009)TFR;IDIS(0.972)PS(0.028)TFR 136.96 0.0025948 2307082900 371415 433430 411071 429527 401418 389075 463774 333664 338715 450842 TRUE FALSE 399850.818 411906.4965 424775.902 394433.2701 385656.3124 403881.5218 402879.9167 377275.0304 368175.8184 436131.0625 0.916813436 0.944455766 0.97396388 0.904391602 0.884267014 0.926055391 0.923758822 0.865049667 0.844186187 1 18.73440222 -5.857489332 9.008712536 0.901575473 0.944928161 0.142718027 0.041644477 0.4640528 39.09306594 0.011580775 0.017218643 1.39E-06 5.857489332 0.043352688 IDIS(ph)PSTLR ddPTM_A459_MK2206_30min_R1 5 IDISPSTLR 9 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.982)PS(0.017)T(0.001)LR;IDIS(0.909)PS(0.091)TLR;IDIS(0.992)PS(0.008)TLR;IDIS(0.866)PS(0.134)T(0.001)LR;IDIS(0.864)PS(0.131)T(0.005)LR 144.17 0.0019696 1863305000 17621.3 16820.5 17529.8 13408.1 16110.3 16484.8 19386.5 15490.8 15673.6 15124.9 TRUE FALSE 16122.5159 15725.48239 16339.92602 14440.79419 15468.59264 17418.15513 18093.26196 15355.36557 17302.92681 16998.6868 0.948456554 0.925099837 0.961246372 0.849524105 0.909987508 1.024676514 1.064391748 0.903326578 1.017897854 1 14.05313568 -6.754125819 24.9815641 0.999912277 0.917711845 0.439527476 0.04693343 170.1585723 581224.7361 0.016104022 0.015795096 1.76E-07 6.754125819 -0.082200432 IDIS(ph)PSTLR ddPTM_A459_MK2206_30min_R2 6 IDISPSTLR 9 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.589)PS(0.399)T(0.012)LR;IDIS(0.5)PS(0.5)TLR;IDIS(0.999)PS(0.001)TLR;IDIS(0.658)PS(0.342)TLR;IDIS(0.924)PS(0.076)T(0.001)LR;IDIS(0.999)PS(0.001)TLR 199.33 0.0013502 719259900 211523 230836 208718 228590 182393 210697 214696 186945 174747 223414 TRUE FALSE 227717.3635 219373.0199 215676.5539 209913.4658 175231.3344 218715.222 186506.1573 211379.3534 189946.1782 216124.0195 1.05364209 1.015033037 0.997929589 0.971263936 0.810790651 1.011989424 0.862958952 0.978046558 0.878875836 1 17.72149989 -5.804095112 2.760683895 0.922400187 1.026663356 0.3426405 0.06078947 0.280689029 4.356457184 0.016712257 0.028811445 1.57E-06 5.804095112 0.104263168 IDISPS(ph)TLR ddPTM_A459_MK2206_30min_R1 1 IDISPSTLR 9 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.077)PS(0.845)T(0.077)LR 116.55 0.0078149 1367500000 7794.4 7408.6 7445.8 5796.6 6913.5 6458.7 8313.7 6254 6952.3 7409.8 TRUE FALSE 7131.44535 6926.298793 6940.399841 6243.055136 6638.120655 6824.386012 7759.108242 6199.321937 7675.016464 8327.781965 0.856343908 0.831709911 0.833403164 0.749666017 0.797105482 0.819472225 0.931713663 0.744414535 0.921615923 1 13.02371658 -8.504729664 5.914915073 0.999904943 0.822102221 0.5766542 0.050348722 0.098044995 13.82248802 0.048237493 0.012506308 3.13E-09 8.504729664 -0.177802723 IDISPS(ph)TLR ddPTM_A459_MK2206_30min_R2 2 IDISPSTLR 9 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.148)PS(0.847)T(0.005)LR;IDIS(0.076)PS(0.848)T(0.076)LR 141.89 0.0021677 1145070000 87716 92432 80579 90207 87395 81955 91946 73210 70847 87291 TRUE FALSE 94431.6044 87841.96129 83265.46364 82836.79954 83963.43318 85073.85495 79873.37975 82778.79837 77009.144 84442.70182 1.118292077 1.040255219 0.986058734 0.980982344 0.994324333 1.007474336 0.94588849 0.980295474 0.911969209 1 16.36568512 -1.522878746 0.668588993 0.968811355 16.32160448 0.750526381 0.026051547 116.4323667 0.699804461 0.01059962 2656.43885 0.03 1.522878746 15.35279313 IDLLELLSIS(ph)GSSLK ddPTM_A459_MK2206_30min_R1 1 IDLLELLSISGSSLK 15 0 Q96RW7-2;Q96RW7 Q96RW7-2 HMCN1 Hemicentin-1 1 IDLLELLS(0.111)IS(0.886)GS(0.002)S(0.002)LK 83.862 0.022681 14689000 1541.9 2459.8 2277.5 2276.1 901.14 838.5 1265.7 1494.3 2072.5 1841.6 TRUE FALSE 1410.753308 2299.666573 2122.909645 2451.405616 865.2456856 885.9751454 1181.267462 1481.235493 2287.943792 2069.751311 0.681605225 1.11108352 1.02568344 1.184396214 0.418043308 0.428058743 0.570729177 0.715658681 1.10541966 1 11.01524172 -6.253140854 24.95931683 0.671408763 1.010362291 0.256489574 0.24095518 791.7896887 2381449.91 0.073988587 0.093905807 5.58E-07 6.253140854 0.338953528 IDLPEVQIEHDPELEKES(ph)PGLK ddPTM_A459_MK2206_30min_R1 2 IDLPEVQIEHDPELEKESPGLK 22 1 Q14966-3;Q14966;Q14966-5 Q14966-3 ZNF638 Zinc finger protein 638 1 IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK 64.035 0.0033059 28092000 9093.9 10993.3 9912.4 10546.3 6305.4 7067.5 6337.6 6370.2 8302.2 6388 TRUE FALSE 8320.416051 10277.63417 9239.573906 11358.57785 6054.242566 7467.655742 5914.830268 6314.506013 9165.2434 7179.393667 1.158930188 1.431546263 1.286957414 1.582108236 0.843280484 1.040151312 0.823862089 0.879531936 1.276604101 1 12.80964629 -6.269876107 24.99210495 0.96669175 1.364080716 0.59414196 0.15681241 416.9288729 1235065.245 0.047118586 0.054271947 5.37E-07 6.269876107 0.397388966 IDLPEVQIEHDPELEKES(ph)PGLK ddPTM_A459_MK2206_30min_R2 2 IDLPEVQIEHDPELEKESPGLK 22 1 Q14966-3;Q14966;Q14966-5 Q14966-3 ZNF638 Zinc finger protein 638 1 IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK 96.391 8.56E-05 12850900 114753 110389 97901 98050 87968 58359 124948 99116 61638 106464 TRUE FALSE 123538.5779 104907.2428 101164.9705 90039.00135 84513.93432 60579.89264 108542.1775 112070.8015 66999.16182 102990.0884 1.199519098 1.018614941 0.982278703 0.87424919 0.8206026 0.5882109 1.053908965 1.088170748 0.6505399 1 16.65214598 -4.899920837 1.203984913 0.867627911 1.295639586 0.310558447 0.152751621 1.624746167 2.32978264 0.048714222 0.829507464 1.26E-05 4.899920837 0.428011674 IDQLEGDHQLIQEALIFDNK ddPTM_A459_MK2206_30min_R1 2 IDQLEGDHQLIQEALIFDNK 20 0 P12814-4;P12814-3;P12814;P12814-2;H9KV75;H7C5W8;H0YJ11;H0YJW3 P12814-4 ACTN1 Alpha-actinin-1 0 ; 186.36 1.74E-15 14002500 6451.5 6258.3 6923.1 6487.1 6421.6 5568.7 6134.8 6195.6 5383.2 5764.6 FALSE TRUE 5902.766047 5850.883533 6453.179261 6986.737566 6165.814074 5883.994982 5725.558686 6141.432522 5942.802904 6478.762169 0.911094727 0.903086636 0.996051266 1.078406242 0.951696314 0.908197404 0.883742687 0.94793301 0.917274434 1 12.66150248 -6.525030656 24.51283633 0.925722877 0.974697309 0.109312383 0.053419235 112.4898397 1281360.555 0.018919518 0.01904574 2.99E-07 6.525030656 0.048974433 IDRDSYS(ph)PR ddPTM_A459_MK2206_30min_R1 1 IDRDSYSPR 9 1 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 IDRDSYS(1)PR 134.38 0.013748 54453000 7757.7 6591.4 6910.2 6599.3 6941 6635.6 7288.3 6110.8 5590.1 5153.4 TRUE FALSE 7097.866878 6162.298662 6441.154877 7107.579229 6664.525272 7011.301938 6802.110805 6057.37392 6171.210899 5791.842098 1.225493851 1.063961786 1.112108163 1.227170753 1.150674545 1.210547839 1.174429601 1.045845832 1.065500543 1 12.49980656 -7.765770468 24.38374604 1.041754823 1.163754725 0.580536141 0.05025735 63.4354143 357123.7731 0.027018193 0.013710849 1.71E-08 7.765770468 0.121999902 IDS(ph)LSAQLSQLQK ddPTM_A459_MK2206_30min_R2 1 IDSLSAQLSQLQK 13 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 IDS(0.901)LS(0.099)AQLSQLQK 162.79 0.00036323 8084600 31425 29791 28311 33082 26881 23672 36187 29928 28288 32584 TRUE FALSE 33830.92216 28311.62226 29254.87461 30379.09478 25825.51687 24572.85455 31435.60343 33839.69236 30748.43911 31520.78675 1.073289269 0.898188947 0.928113719 0.963779712 0.819317014 0.779576181 0.997297551 1.073567504 0.975497197 1 14.94401592 -7.499893555 24.59578958 1.021805938 0.907211144 0.289587505 0.077856011 765.9328518 819605.5378 0.034170809 0.022846813 3.16E-08 7.499893555 -0.114594794 IDS(ph)PGFKPASQQK ddPTM_A459_MK2206_30min_R1 1 IDSPGFKPASQQK 13 1 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 IDS(1)PGFKPASQQK 165.49 0.0016939 119210000 3521 4271.5 4248 3093.1 2828.8 2175.8 2882.6 2922.6 3183.3 2855.5 TRUE FALSE 3221.52046 3993.424574 3959.657596 3331.331098 2716.122906 2298.991916 2690.307014 2897.048016 3514.215427 3209.260898 1.003820058 1.24434401 1.233822279 1.038036858 0.846339077 0.716361801 0.838294891 0.90271502 1.09502329 1 11.64802536 -6.032831338 3.87022914 0.884236645 1.16747084 0.515794724 0.113036927 0.173710378 5.603135506 0.035500664 0.049763302 9.27E-07 6.032831338 0.283234195 IDSFSVQS(ph)LDSR ddPTM_A459_MK2206_30min_R1 1 IDSFSVQSLDSR 12 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 IDS(0.001)FS(0.011)VQS(0.978)LDS(0.011)R 84.817 0.032109 7164500 1843.7 2437.3 2865 1825.5 1761.4 1963.8 1794.6 1881.1 1837.2 1905.8 TRUE FALSE 1686.883633 2278.631327 2670.531782 1966.100326 1691.239708 2074.988659 1674.885508 1864.653741 2028.183514 2141.904892 0.787562342 1.063834036 1.246802224 0.917921395 0.789596081 0.968758541 0.781960728 0.870558608 0.94690643 1 11.06467871 -5.978212315 24.91573002 0.881915246 1.043596169 0.202120973 0.123129168 311.33547 356031.039 0.034581306 0.051288276 1.05E-06 5.978212315 0.161680923 IDSLS(ph)AQLSQLQK ddPTM_A459_MK2206_30min_R2 1 IDSLSAQLSQLQK 13 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 IDS(0.251)LS(0.749)AQLSQLQK 196.37 0.00019025 5960900 35083 37071 31645 36868 34449 25555 38173 25368 29328 37588 TRUE FALSE 37768.98145 35230.10805 32700.02851 33855.76647 33096.35917 26527.51343 33160.83925 28683.6847 31878.89643 36361.50664 1.038707824 0.968884716 0.899303454 0.931088109 0.910203185 0.729549347 0.911976491 0.78884753 0.876720999 1 15.15012436 -4.823208817 0.768674683 0.85711914 1.136257464 0.348400738 0.070761243 2.62044151 1.228492654 0.027350326 0.625657234 1.50E-05 4.823208817 0.279138325 IDSLSAQLS(ph)QLQK ddPTM_A459_MK2206_30min_R2 1 IDSLSAQLSQLQK 13 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 IDSLS(0.078)AQLS(0.922)QLQK 100.23 0.013527 0 7055.9 11125 11469 12740 10163 9743.6 14585 9201.6 8857.5 10371 TRUE FALSE 7596.105129 10572.54868 11851.37074 11699.10125 9763.949555 10114.39953 12669.97198 10404.28071 9627.909339 10032.59512 0.757142598 1.053819929 1.181286656 1.166109178 0.973222724 1.008153863 1.262880823 1.037047802 0.959662901 1 13.29240721 -4.766295762 4.990745155 1.081336054 0.737602 0.494617589 0.095185763 0.143551125 9.387562216 0.02443784 0.17247905 1.71E-05 4.766295762 -0.343734053 IDSNIS(ph)PK ddPTM_A459_MK2206_30min_R1 2 IDSNISPK 8 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 IDS(0.003)NIS(0.997)PK;IDS(0.001)NIS(0.999)PK 96.229 0.021247 125220000 16058.9 20826.3 21854 18825.2 11463.9 9667.4 13116.1 14160.6 17727.3 16581.1 TRUE FALSE 14693.00623 19470.50408 20370.61137 20275.12017 11007.26859 10214.75983 12241.1489 14036.79537 19570.11627 18635.29185 0.788450556 1.044818844 1.093120061 1.087995848 0.590667894 0.548140588 0.656879914 0.753237217 1.050164196 1 14.18574979 -6.252090984 24.90836346 0.737776355 1.012935353 0.30578946 0.171524628 731.5459572 1949169.338 0.052917346 0.067353132 5.60E-07 6.252090984 0.275158998 IDSVAAQPT(ph)ATSPVVYTR ddPTM_A459_MK2206_30min_R1 1 IDSVAAQPTATSPVVYTR 18 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IDSVAAQPT(0.636)AT(0.03)S(0.334)PVVYTR 192.23 5.83E-10 4915400 3298.5 2980.6 3211.8 2447.7 2586.3 2737.7 3456.6 2206.8 3169.9 3640.9 TRUE FALSE 3017.945254 2786.562398 2993.791965 2636.222278 2483.282194 2892.706208 3226.016521 2187.50618 3499.422449 4091.962179 0.737530095 0.680984397 0.731627477 0.644244048 0.606868315 0.706923984 0.78837887 0.534586119 0.855194231 1 11.9985771 -8.510915498 6.608780813 0.999928026 0.682113948 0.702353275 0.068067272 0.065514742 15.96589595 0.063401621 0.016413443 3.08E-09 8.510915498 -0.317814078 IDSVAAQPTAT(ph)SPVVYTR ddPTM_A459_MK2206_30min_R1 1 IDSVAAQPTATSPVVYTR 18 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IDSVAAQPT(0.001)AT(0.962)S(0.037)PVVYTR 243.37 5.58E-25 5167900 1606.2 1582.1 1454.7 978.82 1553.2 1486.7 1923.2 1182 1656.3 1785.3 TRUE FALSE 1469.584256 1479.105002 1355.959017 1054.208886 1491.332755 1570.875669 1794.906837 1171.665899 1828.478312 2006.476442 0.732420389 0.737165397 0.675791147 0.525403072 0.743259539 0.782902623 0.894556646 0.583942016 0.911288203 1 10.9704485 -6.62301294 3.592363308 0.812597217 0.669819235 0.303778637 0.116154215 0.343113368 8.605279655 0.039451895 0.039491404 2.38E-07 6.62301294 -0.142777983 IDSVAAQPTAT(ph)SPVVYTR ddPTM_A459_MK2206_30min_R2 1 IDSVAAQPTATSPVVYTR 18 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IDSVAAQPTAT(0.996)S(0.003)PVVYTR 284.84 3.90E-67 10203000 53483 38760 38223 39784 39674 37951 42949 35895 27132 47717 TRUE FALSE 57577.6996 36835.23476 39497.33574 36533.51994 38116.19941 39395.2519 37309.74471 40586.59975 29491.89232 46159.9982 1.24735056 0.797990386 0.855661553 0.791454102 0.825740921 0.853450031 0.808270064 0.879259128 0.638905838 1 15.49435555 -4.759307437 24.99993255 0.823938475 1.247351102 0.686832716 0.084940982 29.27233153 343175.357 0.019184065 0.123011307 1.74E-05 4.759307437 0.423412627 IDSVAAQPTATS(ph)PVVYTR ddPTM_A459_MK2206_30min_R2 1 IDSVAAQPTATSPVVYTR 18 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IDSVAAQPT(0.285)AT(0.285)S(0.43)PVVYTR 162.92 6.38E-06 9410000 51439 41042 36987 40978 37482 35849 41049 35359 28403 40789 TRUE FALSE 55377.20939 39003.91396 38220.12812 37629.96632 36010.26835 37213.25882 35659.21699 39980.54271 30873.4416 39458.05827 1.403444868 0.988490455 0.968626683 0.953669997 0.912621399 0.943109227 0.903724576 1.013241514 0.78243692 1 15.26803234 -4.7340787 3.203997488 0.935433072 1.503380202 0.841240122 0.060686215 0.147123826 2.067797593 0.01433514 0.223940274 1.84E-05 4.7340787 0.56794713 IDT(ph)PPACTEESIATPSEIK ddPTM_A459_MK2206_30min_R2 1 IDTPPACTEESIATPSEIK 19 0 O94913 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 IDT(1)PPACTEESIATPSEIK 232.15 3.84E-53 0 37007 21741 28004 18694 20304 11041 30239 23856 15166 32860 TRUE FALSE 39840.28437 20661.37355 28937.63938 17166.6404 19506.76294 11461.17299 26268.58298 26974.06111 16485.11127 31787.78089 1.253320718 0.649978482 0.910338456 0.540038968 0.613656015 0.360552787 0.826373601 0.848566976 0.518598996 1 14.95618468 -2.883366143 1.547644813 0.675436161 199.9998826 0.417514762 0.192312438 460.6809014 4.19312544 0.052509107 323255.0366 0.001308079 2.883366143 199.3244464 IDTHPSPS(ph)HSSTVK ddPTM_A459_MK2206_30min_R2 1 IDTHPSPSHSSTVK 14 0 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H0Y594;H7C477;B7ZBA0 A0A0C4DG98 THOC2 THO complex subunit 2 1 IDTHPS(0.067)PS(0.88)HS(0.014)S(0.014)T(0.024)VK 73.219 0.032814 16671000 38798 85227 54814 140130 119090 170940 143000 71848 111770 115540 TRUE FALSE 41768.40471 80994.75111 56641.4714 128680.9307 114413.9282 177445.2415 124223.9282 81238.78029 121491.5526 111769.9393 0.373699807 0.724655946 0.506768383 1.151301786 1.023655636 1.587593611 1.11142521 0.726839263 1.086978783 1 16.7701727 -5.761479555 24.99999053 1.104704063 0.554002743 0.591086866 0.214450339 0.79648453 495986.1953 0.063102125 0.10084483 1.73E-06 5.761479555 -0.550701319 IDTIEIITDR ddPTM_A459_MK2206_30min_R1 3 IDTIEIITDR 10 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;; 179.1 0.00097923 44041100 9878.1 10128.5 7531.5 7674.7 8020.6 8447.7 8998.4 7905.6 7755.4 8994.4 FALSE TRUE 9037.915723 9469.132809 7020.282764 8265.806724 7701.122518 8926.001474 8398.133155 7836.482173 8561.601583 10108.69418 0.894073514 0.936731554 0.694479687 0.817692828 0.761831586 0.883002425 0.830783186 0.775222006 0.846954259 1 13.30330902 -8.563067247 19.93021257 1.000000002 0.822754617 0.383036056 0.066499946 1316.215433 652735.8808 0.065510155 0.016914649 2.73E-09 8.563067247 -0.177245385 IDTIEIITDR ddPTM_A459_MK2206_30min_R2 3 IDTIEIITDR 10 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;; 187.5 0.00097923 42838300 146842 149347 138227 154163 125080 146299 160769 130618 118175 156285 FALSE TRUE 158084.3364 141930.6452 142835.4192 141567.3898 120168.7307 151866.511 139659.8372 147690.2211 128453.6479 151185.4332 1.045632063 0.938785187 0.944769718 0.936382472 0.794843314 1.004504916 0.923765168 0.97688129 0.849643019 1 17.20595962 -4.375206126 1.689885374 0.925372434 1.261524482 0.24045212 0.061497394 4.835565924 5.448263165 0.016241953 3.711165481 4.21E-05 4.375206126 0.336152048 IDTLNSDGY(ph)TPEPARIT(ph)SPDK ddPTM_A459_MK2206_30min_R1 1 IDTLNSDGYTPEPARITSPDK 21 1 P43403-3;P43403 P43403-3 ZAP70 Tyrosine-protein kinase ZAP-70 2 IDT(0.002)LNS(0.003)DGY(0.788)T(0.207)PEPARIT(0.506)S(0.494)PDK 73.389 0.039264 5123300 1606.1 1228.1 1250.8 1127.6 1329.6 1365.8 1349 1120 1134.8 982.79 TRUE FALSE 1469.492761 1148.150467 1165.899181 1214.447947 1276.639217 1443.130416 1259.010671 1110.207958 1252.766521 1104.545445 1.33040498 1.039477798 1.055546593 1.099500209 1.155805062 1.306537836 1.139845062 1.005126555 1.134191922 1 10.10923706 -7.651980013 6.926236919 1.052974076 1.156295526 0.230731248 0.095741071 0.382602132 21.86504321 0.047266072 0.02700281 2.23E-08 7.651980013 0.10332145 IDVPPTANT(ph)PTPVR ddPTM_A459_MK2206_30min_R2 1 IDVPPTANTPTPVR 14 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;A0A087X044;Q9UPQ3-3 E7EUN2 AGAP1 "Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1" 1 IDVPPT(0.303)ANT(0.639)PT(0.058)PVR 97.767 0.025409 2939700 15976 13569 15984 18227 13619 18728 19042 10130 16110 14470 TRUE FALSE 17199.13484 12895.18319 16516.89858 16737.79579 13084.24963 19440.70716 16541.76253 11454.02578 17511.21868 13997.84509 1.228698756 0.921226311 1.179960093 1.195740894 0.934733136 1.388835713 1.181736362 0.818270649 1.25099389 1 13.77291713 IDVPQDLEDDLTATPLSHATVPQS(ph)PAR ddPTM_A459_MK2206_30min_R1 2 IDVPQDLEDDLTATPLSHATVPQSPAR 27 0 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 IDVPQDLEDDLTATPLS(0.183)HAT(0.34)VPQS(0.478)PAR;IDVPQDLEDDLTATPLS(0.004)HAT(0.467)VPQS(0.529)PAR 171.79 5.68E-22 11833300 2597.91 1648.27 2076.49 1359.7 3166.6 2509.84 2115.98 1988.79 1503.11 1346.51 TRUE FALSE 2376.944112 1540.967323 1935.543644 1464.42433 3040.467617 2651.944972 1974.826835 1971.402219 1659.363663 1513.325824 1.570675709 1.018265398 1.278999944 0.967686077 2.009129539 1.75239524 1.304958128 1.302695155 1.096501253 1 10.56350692 -8.210518718 1.88904653 1.007328473 1.411946397 0.197662274 0.296189069 0.635743638 4.104065171 0.295955372 0.088600623 6.16E-09 8.210518718 0.404617924 IDYLLPGPGPAHS(ph)PQPSK ddPTM_A459_MK2206_30min_R2 1 IDYLLPGPGPAHSPQPSK 18 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 IDYLLPGPGPAHS(0.993)PQPS(0.007)K 69.259 0.017174 4422900 33119 31182 34255 30476 28721 23590 35679 27858 26261 34040 TRUE FALSE 35654.6161 29633.54722 35397.0446 27986.01331 27593.26923 24487.73398 30994.30444 31499.13625 28545.13431 32929.27759 1.082763386 0.89991489 1.074941426 0.849882395 0.837955499 0.743646256 0.941238518 0.956569307 0.866861845 1 15.00708324 -5.772468112 24.96878822 0.877827948 1.007277406 0.35380002 0.082125604 233.4724459 528576.2457 0.023329639 0.034974778 1.69E-06 5.772468112 0.129449458 IDYLLPGPGPAHS(ph)PQPSKR ddPTM_A459_MK2206_30min_R1 1 IDYLLPGPGPAHSPQPSKR 19 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 IDYLLPGPGPAHS(0.5)PQPS(0.5)KR 65.598 0.016312 9558800 4353.3 4566.2 4016.3 3931.1 3893.8 4224.2 4551.9 4097.4 3591.1 3345.5 TRUE FALSE 3983.028975 4268.93955 3743.684746 4233.874003 3738.701701 4463.370554 4248.251056 4061.576864 3964.407696 3759.965797 1.059325853 1.135366591 0.995669894 1.126040563 0.994344604 1.187077435 1.129864282 1.080216439 1.05437334 1 11.87650382 -8.569785758 2.330123533 1.000481005 1.089777284 0.183128012 0.057820894 0.572604314 7.30048392 0.054012782 0.01476082 2.69E-09 8.569785758 0.089296279 IDYLLPGPGPAHS(ph)PQPSKR ddPTM_A459_MK2206_30min_R2 1 IDYLLPGPGPAHSPQPSKR 19 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 IDYLLPGPGPAHS(0.912)PQPS(0.088)KR 52.769 0.048247 10351000 55247 76022 79875 64739 67497 59776 83670 64175 72620 68543 TRUE FALSE 59476.7528 72246.85803 82537.99263 59449.61661 64846.72863 62050.81757 72684.02849 72562.89285 78936.35633 66306.44752 0.89699803 1.089590239 1.244795879 0.896588776 0.977985265 0.935818761 1.096183421 1.094356515 1.190477839 1 16.01686154 -7.437457015 11.54402314 1.10451306 1.015193796 0.13823769 0.106014345 1.674751782 221.5412995 0.04633402 0.031219023 3.65E-08 7.437457015 -0.089319264 IECDDKGDGSCDVR ddPTM_A459_MK2206_30min_R2 1 IECDDKGDGSCDVR 14 1 P21333-2;P21333;Q60FE5;A0A087WWY3;Q14315-2;Q14315 P21333-2;Q14315-2 FLNA;FLNC Filamin-A;Filamin-C 0 103.44 0.019404 67760000 172030 184160 144670 143970 182290 111260 173610 155900 135140 165700 FALSE TRUE 185200.7491 175014.8822 149493.2256 132207.1905 175132.3787 115494.0773 150814.7985 176276.6653 146894.2329 160293.2226 1.155387272 1.091842059 0.932623496 0.824783408 1.092575069 0.720517533 0.940868217 1.099713777 0.916409506 1 17.2903539 -5.1593905 3.582822321 0.937677402 1.142390594 0.32287566 0.107243427 0.278908133 6.495713251 0.027930245 0.089040755 6.93E-06 5.1593905 0.204713192 IECSHIR ddPTM_A459_MK2206_30min_R2 3 IECSHIR 7 0 D6RC60;D6RIC3;A0A0C4DGU5;A0A087X2G6;Q9Y3C1;Q9Y3C1-3;Q9Y3C1-2 D6RC60 NOP16 Nucleolar protein 16 0 ;; 133.81 0.0043613 2838920 17537.3 17646.7 19920.5 20318.1 21974.3 19824.1 19428.1 16338.2 19426.7 22549.9 FALSE TRUE 18879.96917 16770.39054 20584.63953 18658.04624 21111.47857 20578.52002 16877.16713 18473.65884 21116.39925 21814.09861 0.865493895 0.768786776 0.943639244 0.855320523 0.967790554 0.943358714 0.773681619 0.846867852 0.968016127 1 14.41297324 -14.52287875 0.169372292 1.468958349 0.850836496 0.241134255 0.068448687 216.0061609 2.02782266 34.00112508 0.261977543 3.00E-15 14.52287875 -0.618121853 IEDPVY(ph)GIYYVDHINR ddPTM_A459_MK2206_30min_R1 1 IEDPVYGIYYVDHINR 16 0 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7;A0A087WXD2;H7C5T8;H7C4U7;H7C535;Q96QZ7-4;Q96QZ7-3;Q96QZ7-5;H7C4S7 A0A087WT53 MAGI1 "Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1" 1 IEDPVY(1)GIYYVDHINR 155.06 0.0010977 0 1562.7 1585.2 1618.2 1499.6 1626.1 1511.1 1761 1481.9 1328.4 1476.4 TRUE FALSE 1429.784159 1482.003192 1508.361093 1615.099452 1561.328994 1596.657176 1643.526903 1468.943905 1466.491934 1659.307578 0.861675182 0.893145557 0.909030437 0.973357485 0.940952126 0.962243045 0.990489602 0.885275234 0.883797527 1 10.69636562 -5.324424125 2.108401853 0.945056598 0.869522458 0.364150228 0.037570792 0.413814051 3.420050444 0.011127256 0.037673377 4.74E-06 5.324424125 -0.07553414 IEDPVY(ph)GIYYVDHINR ddPTM_A459_MK2206_30min_R2 2 IEDPVYGIYYVDHINR 16 0 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7;A0A087WXD2;H7C5T8;H7C4U7;H7C535;Q96QZ7-4;Q96QZ7-3;Q96QZ7-5;H7C4S7 A0A087WT53 MAGI1 "Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1" 1 IEDPVY(1)GIYYVDHINR;IEDPVY(1)GIYYVDHINR 166.9 0.00010209 1082300 13148 14527.7 12769.3 15540.4 14537.4 12480.9 16513.5 10917.6 11647.9 12256.7 TRUE FALSE 14154.62099 13806.27554 13195.02209 14270.69961 13966.58863 12955.8694 14345.25761 12344.56781 12661.01329 11856.76488 1.193801271 1.164421803 1.112868664 1.203591346 1.177942615 1.092698516 1.209879571 1.041141317 1.067830341 1 13.5334228 -7.775965665 24.9958187 1.040864293 1.16219747 0.699416762 0.038599572 138.9947511 239168.9587 0.02036332 0.009850514 1.68E-08 7.775965665 0.121333177 IEDS(ph)EPHIPLIDDTDAEDDAPTKR ddPTM_A459_MK2206_30min_R1 2 IEDSEPHIPLIDDTDAEDDAPTKR 24 1 P20020-6;P20020;P20020-4;P20020-1;A0A0U1RQU3;E7ERY9;H0YHH6 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 IEDS(1)EPHIPLIDDTDAEDDAPTKR;IEDS(1)EPHIPLIDDTDAEDDAPTKR 113.05 1.60E-07 15232500 4182.5 4707.1 3514.78 3617.38 4460.7 4035.5 5018.5 4763.7 5854 5328 TRUE FALSE 3826.756412 4400.666934 3276.206526 3895.991234 4283.020873 4263.986523 4683.725022 4722.051473 6462.544249 5988.072864 0.639063101 0.734905375 0.547122021 0.650625222 0.715258643 0.712079933 0.78217569 0.788576155 1.079236074 1 12.54787606 -7.918415623 1.12159254 1.04376644 0.659096657 0.826522151 0.064176237 0.191758068 0.436549551 0.056945096 0.020853063 1.21E-08 7.918415623 -0.384669783 IEDS(ph)EPHIPLIDDTDAEDDAPTKR ddPTM_A459_MK2206_30min_R2 1 IEDSEPHIPLIDDTDAEDDAPTKR 24 1 P20020-6;P20020;P20020-4;P20020-1;A0A0U1RQU3;E7ERY9;H0YHH6 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 IEDS(1)EPHIPLIDDTDAEDDAPTKR 115.58 1.04E-07 4006200 31064 24211 25730 28297 27837 29772 35303 19047 31169 31386 TRUE FALSE 33442.28372 23008.71695 26587.82536 25985.04458 26743.97951 30904.99432 30667.67369 21536.5083 33880.02328 30361.87739 1.101456385 0.757816015 0.875697672 0.855844461 0.880840772 1.017888121 1.010071719 0.709327293 1.115873793 1 14.88997338 -6.71804775 24.71838543 0.954930165 0.883573451 0.074033235 0.126247975 360.3297028 205263.308 0.040185921 0.040185631 1.91E-07 6.71804775 -0.071356714 IEDVGS(ph)DEEDDSGK ddPTM_A459_MK2206_30min_R1 11 IEDVGSDEEDDSGK 14 0 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(0.999)DEEDDS(0.001)GK;IEDVGS(1)DEEDDSGK;IEDVGS(0.996)DEEDDS(0.004)GK;IEDVGS(0.887)DEEDDS(0.113)GK;IEDVGS(0.974)DEEDDS(0.026)GK;IEDVGS(0.983)DEEDDS(0.017)GK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(0.92)DEEDDS(0.08)GK;IEDVGS(0.992)DEEDDS(0.008)GK;IEDVGS(0.906)DEEDDS(0.094)GK 263.72 3.86E-36 5173940400 48003.19 64053.2 58784.3 39581.58 34770.57 35379.19 51180.9 38529.64 69818.6 84764.8 TRUE FALSE 43920.26662 59883.32504 54794.1855 42630.16015 33385.58457 37382.32916 47766.71555 38192.77942 77076.49332 95266.10337 0.461027218 0.628590054 0.575169799 0.447485083 0.350445577 0.392399057 0.501403058 0.400906283 0.809065246 1 16.53967536 -8.438818862 3.515484387 0.996184253 0.472738649 0.829592461 0.08085687 0.091883787 2.140871653 0.087226459 0.023097387 3.64E-09 8.438818862 -0.523445604 down IEDVGS(ph)DEEDDSGK ddPTM_A459_MK2206_30min_R2 17 IEDVGSDEEDDSGK 14 0 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(0.598)DEEDDS(0.402)GK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(0.622)DEEDDS(0.378)GK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(0.989)DEEDDS(0.011)GK;IEDVGS(0.53)DEEDDS(0.47)GK;IEDVGS(0.997)DEEDDS(0.003)GK;IEDVGS(0.5)DEEDDS(0.5)GK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK 235.93 1.03E-14 11070184400 1750308 1269029 1391554 1196114 1089565 821741 1548102 1272075 816356.8 1592726 TRUE FALSE 1884312.926 1206010.865 1437947.716 1098387.66 1046783.203 853012.9296 1344834.348 1438339.57 887362.0388 1540755.481 1.222979862 0.782739948 0.933274445 0.712889017 0.67939606 0.553632903 0.872840866 0.933528771 0.575926583 1 20.55520649 -2.422385058 1.257293428 0.763036718 199.9948425 0.438574507 0.147212134 603.6861472 2.91224534 0.042627904 344732.1472 0.003781072 2.422385058 199.2318058 IEDVGS(ph)DEEDDSGKDK ddPTM_A459_MK2206_30min_R1 23 IEDVGSDEEDDSGKDK 16 1 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(0.975)DEEDDS(0.025)GKDK;IEDVGS(0.982)DEEDDS(0.018)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.999)DEEDDS(0.001)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.999)DEEDDS(0.001)GKDK;IEDVGS(0.999)DEEDDS(0.001)GKDK;IEDVGS(1)DEEDDSGKDK 260.08 7.60E-64 17692820200 90635.59 141040.33 126122.09 99494.29 59040.67 54817.25 79637.45 80294.99 120386.57 118473.71 TRUE FALSE 82926.55712 131858.5789 117561.2739 107157.3575 56688.95509 57920.95532 74324.98102 79592.97937 132901.1848 133151.1276 0.622800262 0.990292619 0.882916097 0.804779947 0.425748967 0.435001613 0.558200162 0.597764216 0.998122863 1 17.02270512 -6.025786325 23.8329084 0.630273068 0.847168012 0.102697892 0.207443322 686.8859197 634851.3947 0.061374606 0.079601243 9.42E-07 6.025786325 0.216894944 IEDVGS(ph)DEEDDSGKDK ddPTM_A459_MK2206_30min_R2 26 IEDVGSDEEDDSGKDK 16 1 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.982)DEEDDS(0.018)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.995)DEEDDS(0.005)GKDK;IEDVGS(0.999)DEEDDS(0.001)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.999)DEEDDS(0.001)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.999)DEEDDS(0.001)GKDK;IEDVGS(0.995)DEEDDS(0.005)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.998)DEEDDS(0.002)GKDK;IEDVGS(0.992)DEEDDS(0.008)GKDK;IEDVGS(0.999)DEEDDS(0.001)GKDK;IEDVGS(0.997)DEEDDS(0.003)GKDK 282.09 4.94E-62 14904583300 2016758 1843594.5 1925882 1471338.5 1544581.8 956273.4 1991424 1483339 1144757.3 2113080 TRUE FALSE 2171162.543 1752044.278 1990089.945 1351125.438 1483933.758 992665.0543 1729947.637 1677216.5 1244326.221 2044130.373 1.062144848 0.85710985 0.973563121 0.660978114 0.725948686 0.485617291 0.84630005 0.820503684 0.60873134 1 20.96305578 -5.755253331 24.97055809 0.721775295 0.953556393 0.355437597 0.140149792 155.8483678 629088.1749 0.037184277 0.062382198 1.76E-06 5.755253331 0.231781098 IEDVGS(ph)DEEDDSGKDKK ddPTM_A459_MK2206_30min_R1 6 IEDVGSDEEDDSGKDKK 17 2 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(0.946)DEEDDS(0.054)GKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(0.994)DEEDDS(0.006)GKDKK 112.91 0.0021172 8508800000 41210.8 59087.8 59094.6 46893.1 25269.1 22182.8 34579.4 39062.9 57519.9 52097.1 TRUE FALSE 37705.60505 55241.17348 55083.4232 50504.81469 24262.57824 23438.77097 32272.67132 38721.37718 63499.29944 58551.28206 0.643975738 0.943466506 0.940772281 0.862574019 0.414381673 0.400311832 0.551186416 0.661324156 1.084507413 1 15.83741314 -10.93621962 15.70215719 1 0.714162264 0.123871838 0.220400488 1.44E-09 0 0.23494216 0.056981844 1.16E-11 10.93621962 -0.285837736 IEDVGS(ph)DEEDDSGKDKK ddPTM_A459_MK2206_30min_R2 4 IEDVGSDEEDDSGKDKK 17 2 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(0.999)DEEDDS(0.001)GKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK 94.973 0.0074391 3256477000 368873 453236 416522 249943 317313 150909.3 435691 290584.2 206726.1 468304 TRUE FALSE 397114.2005 430728.9593 430408.6356 229521.8574 304853.6973 156652.2592 378484.2483 328564.5527 224706.7625 453023.2788 0.876586743 0.950787696 0.950080616 0.506644731 0.672931638 0.345792957 0.835463134 0.725270793 0.496015929 1 18.78922566 -5.747524717 24.98904155 0.638575671 0.928315406 0.333445785 0.17469803 247.647303 444740.6902 0.04561503 0.078497759 1.79E-06 5.747524717 0.289739735 IEDVGSDEEDDS(ph)GK ddPTM_A459_MK2206_30min_R1 1 IEDVGSDEEDDSGK 14 0 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(0.024)DEEDDS(0.976)GK 194.77 0.00012177 4583500 1563.1 1737.4 2110.1 1107.4 1399.1 1247.8 1534.6 1426.9 1839.9 2402.1 TRUE FALSE 1430.150137 1624.294944 1966.872291 1192.69214 1343.370884 1318.449358 1432.229634 1414.424764 2031.164189 2699.690283 0.529746003 0.601659736 0.728554791 0.441788507 0.497601852 0.488370598 0.530516276 0.523921123 0.752369337 1 11.39857819 -8.540200285 2.653512463 0.998981829 0.543649582 0.790989077 0.074054359 0.128143683 2.198266756 0.076531663 0.020643248 2.88E-09 8.540200285 -0.455332247 IEDVGSDEEDDS(ph)GK ddPTM_A459_MK2206_30min_R2 1 IEDVGSDEEDDSGK 14 0 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(0.014)DEEDDS(0.986)GK 205.33 1.33E-05 29209000 83461 55383 63963 53072 53620 41607 71629 53726 38171 76552 TRUE FALSE 89850.83833 52632.76075 66095.4945 48735.84783 51514.60938 43190.38354 62224.02626 60748.17267 41491.04458 74054.11451 1.21331325 0.71073378 0.892529671 0.658111277 0.695634668 0.583227331 0.840250764 0.82032137 0.560280072 1 16.17629227 -4.759049212 24.90239382 0.742916911 1.213313897 0.525059041 0.131628792 46.35882057 482887.0151 0.031183316 0.203699451 1.74E-05 4.759049212 0.470396986 IEDVGSDEEDDSGK ddPTM_A459_MK2206_30min_R1 1 IEDVGSDEEDDSGK 14 0 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 210.15 3.79E-29 0 1204.1 1050.5 1108.8 753.59 1059.1 1089.3 1132.4 1013.1 1429.2 1549.1 FALSE TRUE 1101.684972 982.1122591 1033.537745 811.6316324 1016.913804 1150.975225 1056.859662 1004.242574 1577.770454 1741.014203 0.632783449 0.564103531 0.593641191 0.466183234 0.584092768 0.661094678 0.607036784 0.576814693 0.906236406 1 10.76571226 -8.339992392 3.460386582 0.994672664 0.583061808 0.899835118 0.049398475 0.069758004 1.517283252 0.049501611 0.013414305 4.57E-09 8.339992392 -0.411610855 IEDVGSDEEDDSGKDK ddPTM_A459_MK2206_30min_R1 4 IEDVGSDEEDDSGKDK 16 1 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ;;; 207.08 1.04E-13 46585000 14118.3 17861.6 18503.9 13891.3 8992.59 8725.88 12072.9 12147.2 17890.9 16929.1 FALSE TRUE 12917.46445 16698.80659 17247.90682 14961.21033 8634.396098 9219.931785 11267.53887 12040.99831 19750.72308 19026.40472 0.678923036 0.877664847 0.906524752 0.78633933 0.453811228 0.484586128 0.592205361 0.632857258 1.038069114 1 14.21571535 -10.43768789 6.236962464 1.00000005 0.708439179 0.18388344 0.17822437 1.34E-07 2.34E-08 0.187955718 0.045585949 3.65E-11 10.43768789 -0.291560871 IEDVGSDEEDDSGKDK ddPTM_A459_MK2206_30min_R2 1 IEDVGSDEEDDSGKDK 16 1 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 121.92 0.004189 13302000 54615 41669 46697 29105 37862 23086 56840 33910 30702 58046 FALSE TRUE 58796.36639 39599.77805 48253.85467 26727.0284 36375.34764 23964.55391 49376.83972 38342.15343 33372.40446 56151.96377 1.04709368 0.705225167 0.859344027 0.475976735 0.647801879 0.426780335 0.879343061 0.682828362 0.594323016 1 15.77704886 -3.293600598 1.178603036 0.668141607 11.65214845 0.266542833 0.170623577 57.57138496 3.474819578 0.048854528 1558.693121 0.000508627 3.293600598 10.98400684 IEDVGSDEEDDSGKDKK ddPTM_A459_MK2206_30min_R1 5 IEDVGSDEEDDSGKDKK 17 2 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ;;;; 113.54 0.001146 155285700 32669.7 44769.1 47747.5 37759.5 22420.4 19117.7 29572.8 32178.8 43906.6 43379.7 FALSE TRUE 29890.97046 41854.62345 44506.53273 40667.74323 21527.34799 20200.12765 27600.05247 31897.46414 48470.84819 48753.90474 0.613099005 0.858487616 0.912881398 0.834143305 0.441551258 0.414328406 0.566109579 0.654254553 0.994194177 1 15.57323015 -10.39750246 9.574428829 0.999999769 0.692614819 0.187969554 0.187426162 1.43E-10 0 0.200228887 0.048562638 4.00E-11 10.39750246 -0.307384951 IEDVTPIPSDS(ph)TR ddPTM_A459_MK2206_30min_R1 2 IEDVTPIPSDSTR 13 0 P62263;A0A2R8Y811 P62263 RPS14 40S ribosomal protein S14 1 IEDVTPIPS(0.014)DS(0.884)T(0.102)R;IEDVTPIPSDS(0.984)T(0.016)R 195.94 0.00019834 17458500 7660.7 6588.5 8385.3 5610.4 7111 8074.5 6134.3 5943.6 5699.6 4464 TRUE FALSE 7009.117237 6159.587452 7816.129199 6042.51398 6827.753812 8531.671212 5725.09204 5891.635732 6292.093816 5017.034021 1.397063924 1.227734838 1.557918317 1.204399642 1.360914393 1.700540833 1.141130799 1.174326446 1.254146133 1 12.29261901 IEDVTPIPSDS(ph)TR ddPTM_A459_MK2206_30min_R2 3 IEDVTPIPSDSTR 13 0 P62263;A0A2R8Y811 P62263 RPS14 40S ribosomal protein S14 1 IEDVTPIPSDS(0.882)T(0.118)R;IEDVTPIPSDS(0.922)T(0.078)R;IEDVTPIPSDS(0.954)T(0.046)R 211.83 5.32E-06 25545000 77917.4 106381 67948.8 101073.2 79769.6 86948.4 132808 146662 136767 71271 TRUE FALSE 83882.81605 101098.2742 70214.17908 92815.19624 76637.44469 90257.28229 115370.1501 165831.227 148662.7464 68945.43311 1.216655147 1.466352007 1.018402176 1.346212389 1.111566658 1.309111833 1.67335449 2.405253249 2.156237763 1 16.07316737 -7.38885697 3.407329717 1.970333814 1.241284195 0.358433718 0.362277222 0.22223503 4.764147181 0.158318447 0.100533183 4.08E-08 7.38885697 -0.729049619 IEDVTPIPSDS(ph)TRR ddPTM_A459_MK2206_30min_R2 4 IEDVTPIPSDSTRR 14 1 P62263;A0A2R8Y811 P62263 RPS14 40S ribosomal protein S14 1 IEDVTPIPSDS(0.995)T(0.005)RR;IEDVTPIPS(0.074)DS(0.767)T(0.159)RR;IEDVTPIPS(0.004)DS(0.804)T(0.192)RR;IEDVTPIPS(0.022)DS(0.803)T(0.175)RR 144.18 0.00095511 33873900 142799 219316 160848 233101 175452 216372 285707 317212 307560 151827 TRUE FALSE 153731.8012 208425.0864 166210.592 214055.9026 168562.8729 224606.1881 248193.3277 358672.6976 334311.0129 146872.8974 1.046699588 1.419084733 1.131662784 1.457422754 1.147678543 1.529255513 1.689851103 2.442061836 2.276192672 1 17.16420867 -7.262077393 2.308143819 2.012864851 1.264024482 0.342189623 0.384592503 0.289524833 3.02565877 0.176309652 0.115480672 5.47E-08 7.262077393 -0.748840369 IEDVTPIPSDST(ph)RR ddPTM_A459_MK2206_30min_R2 1 IEDVTPIPSDSTRR 14 1 P62263;A0A2R8Y811 P62263 RPS14 40S ribosomal protein S14 1 IEDVTPIPS(0.002)DS(0.177)T(0.822)RR 93.768 0.017495 5261200 19372 44706 30479 44338 29988 46347 52395 63940 58241 30984 TRUE FALSE 20855.13521 42485.96505 31495.15465 40715.44357 28810.52044 48110.76756 45515.47356 72297.17754 63306.6969 29972.99462 0.695797516 1.417474817 1.050784383 1.35840426 0.961215948 1.605137164 1.518549419 2.41207722 2.112124521 1 14.87137561 -7.120795476 1.877061657 1.915036897 1.127844638 0.363198697 0.403620384 0.331332602 2.303840382 0.186802405 0.131009753 7.57E-08 7.120795476 -0.787192259 IEDVTPIPSDSTR ddPTM_A459_MK2206_30min_R1 2 IEDVTPIPSDSTR 13 0 P62263;A0A2R8Y811 P62263 RPS14 40S ribosomal protein S14 0 ; 152.64 0.0060003 7761900 3475 3019.6 2656.7 2592.8 3065.1 2902.3 3033.9 2511.14 2290.11 2377.9 FALSE TRUE 3179.433002 2823.023491 2476.370606 2792.497905 2943.010577 3066.625718 2831.514067 2489.185368 2528.17513 2672.492204 1.18968841 1.056326184 0.926614716 1.044904042 1.10122326 1.147477891 1.059503209 0.931409777 0.945999066 1 11.38397002 -7.718288984 7.046440131 0.954102614 1.07173057 0.382843872 0.067332511 0.222224337 28.14830231 0.035136636 0.019812778 1.91E-08 7.718288984 0.117627956 IEDVTPIPSDSTR ddPTM_A459_MK2206_30min_R2 2 IEDVTPIPSDSTR 13 0 P62263;A0A2R8Y811 P62263 RPS14 40S ribosomal protein S14 0 ; 171.67 0.0027119 9676000 36583 46076 41403 53799 41151 43842 49950 37297 40338 39862 FALSE TRUE 39383.82261 43787.93284 42783.35536 49403.44961 39535.20497 45510.43803 43391.505 42171.84596 43846.52633 38561.3062 1.021330097 1.135540705 1.109489267 1.281166394 1.025255855 1.18020997 1.125260248 1.093631158 1.137060194 1 15.2348663 -11.00985538 11.48828306 0.999999839 1.125805449 0.215080458 0.070459449 2.76E-07 1.23E-08 0.064983112 0.0157607 9.78E-12 11.00985538 0.12580561 IEDVTPIPSDSTRR ddPTM_A459_MK2206_30min_R1 2 IEDVTPIPSDSTRR 14 1 P62263;A0A2R8Y811 P62263 RPS14 40S ribosomal protein S14 0 ; 150.14 0.00057727 11897100 7803.3 7487.5 7315.9 7510.6 9348.9 7149.7 6760.9 7861.8 5175.3 3541.7 FALSE TRUE 7139.588358 7000.062389 6819.317091 8089.067713 8976.513516 7554.509835 6309.892697 7793.065111 5713.290955 3980.472534 1.793653466 1.758600852 1.713192851 2.032187798 2.25513766 1.897892717 1.585211967 1.957824114 1.435329827 1 11.95872399 -8.51870878 2.618528113 1.000136232 1.875790311 0.713121185 0.176942967 0.154656309 2.522779988 0.18555325 0.050172799 3.03E-09 8.51870878 0.875654079 IEEAMDGSET(ph)PQLFTVLPEKR ddPTM_A459_MK2206_30min_R1 2 IEEAMDGSETPQLFTVLPEKR 21 1 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 IEEAMDGS(0.003)ET(0.997)PQLFTVLPEKR;IEEAMDGS(0.247)ET(0.753)PQLFTVLPEKR 169.88 2.87E-10 97751000 9238.8 9834.3 8543.4 8649.2 10628.1 8127.9 9039.4 9358.6 6565.6 5708.2 TRUE FALSE 8452.991545 9194.085283 7963.497811 9315.362883 10204.76027 8588.094674 8436.398119 9276.778747 7248.117615 6415.374911 1.317614584 1.433132967 1.241314486 1.452037178 1.590672473 1.338673857 1.315028075 1.446022855 1.129804215 1 12.64731786 -8.421725185 3.543081817 1.003035922 1.392327756 0.673712245 0.092830908 0.131031889 2.949143376 0.091813585 0.024332763 3.79E-09 8.421725185 0.389291834 IEEAMDGSET(ph)PQLFTVLPEKR ddPTM_A459_MK2206_30min_R2 5 IEEAMDGSETPQLFTVLPEKR 21 1 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 IEEAMDGS(0.246)ET(0.751)PQLFT(0.003)VLPEKR;IEEAMDGS(0.087)ET(0.912)PQLFT(0.001)VLPEKR;IEEAMDGS(0.021)ET(0.977)PQLFT(0.001)VLPEKR;IEEAMDGS(0.088)ET(0.911)PQLFTVLPEKR;IEEAMDGS(0.005)ET(0.995)PQLFTVLPEKR 100.81 0.00032578 16017700 47130.7 68923.8 65274.1 65807.3 72703 64297.4 59467.9 43487.6 55752.9 54385.2 TRUE FALSE 50739.06263 65501.14432 67450.30592 60430.63308 69848.31492 66744.28261 51659.6933 49171.57864 60602.18646 52610.61538 0.964426329 1.245017642 1.282066469 1.148639541 1.327646796 1.268646682 0.981925281 0.934632265 1.151900354 1 15.6830663 -7.26570158 24.96502666 1.011667155 1.214213675 0.426154457 0.1070967 342.5315671 2006298.982 0.04372023 0.030648486 5.42E-08 7.26570158 0.20254652 IEEDNLTYQHLLPES(ph)PEPSASHALSDYETSEK ddPTM_A459_MK2206_30min_R2 2 IEEDNLTYQHLLPESPEPSASHALSDYETSEK 32 0 Q5JTU8;B1AMJ5;A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8 Q5JTU8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 IEEDNLTYQHLLPES(0.705)PEPS(0.189)AS(0.091)HALS(0.013)DY(0.001)ETSEK;IEEDNLTYQHLLPES(0.963)PEPS(0.03)AS(0.006)HALSDYETSEK 83.747 7.08E-07 9375200 29035 45985 36782 51164 58624 50443 52964 39169 45800 46630 TRUE FALSE 31257.94192 43701.45177 38008.29352 46983.73753 56322.1272 52362.64371 46009.76318 44288.52279 49783.60121 45108.46692 0.69295066 0.968808181 0.842597768 1.041572475 1.248593247 1.160816301 1.019980645 0.981822833 1.103642057 1 15.46111063 -5.815785676 4.433871484 1.089884819 0.846371747 0.573185084 0.097015717 0.158096382 6.37768337 0.02880729 0.045355906 1.53E-06 5.815785676 -0.243513072 IEEDNLTYQHLLPESPEPS(ph)ASHALSDYETSEK ddPTM_A459_MK2206_30min_R2 1 IEEDNLTYQHLLPESPEPSASHALSDYETSEK 32 0 Q5JTU8;B1AMJ5;A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8 Q5JTU8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 IEEDNLTYQHLLPES(0.09)PEPS(0.441)AS(0.441)HALS(0.009)DY(0.013)ET(0.005)S(0.001)EK 73.797 1.53E-05 4887400 23143 34390 32579 42906 45347 44759 46320 33647 41633 35601 TRUE FALSE 24914.84587 32682.24261 33665.1676 39400.44255 43566.44893 46462.33511 40238.12836 38044.77843 45254.16308 34439.34229 0.723441396 0.948979871 0.977520631 1.144053281 1.265019772 1.349106343 1.168376795 1.10468946 1.314025184 1 15.07176997 -5.259385866 1.143766857 1.211057357 0.708181856 0.681398665 0.102743877 0.469135591 0.867420867 0.033858163 0.232783419 5.50E-06 5.259385866 -0.502875501 IEEDRCS(ph)NSADITGPSFIR ddPTM_A459_MK2206_30min_R1 2 IEEDRCSNSADITGPSFIR 19 1 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 IEEDRCS(0.643)NS(0.357)ADITGPSFIR;IEEDRCS(0.906)NS(0.093)ADIT(0.001)GPSFIR 134.04 0.0010184 15440700 1439 1045.77 1451.19 1086.17 1170.41 1226.35 1520.95 1143.11 1487.38 1509.49 TRUE FALSE 1316.605494 977.6901829 1352.687266 1169.827002 1123.790091 1295.784877 1419.490201 1133.11591 1641.998474 1696.497017 0.776072979 0.576299382 0.797341376 0.689554411 0.662417959 0.763800268 0.836718359 0.667915062 0.967875839 1 10.72834318 -8.272039919 22.15735283 0.98393836 0.721216374 0.676560595 0.072647121 96.10994079 200879.643 0.065469451 0.017813348 5.35E-09 8.272039919 -0.262721986 IEEDRCS(ph)NSADITGPSFIR ddPTM_A459_MK2206_30min_R2 2 IEEDRCSNSADITGPSFIR 19 1 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 IEEDRCS(0.983)NS(0.017)ADITGPSFIR;IEEDRCS(0.876)NS(0.124)ADITGPSFIR 161.55 6.41E-06 14052100 19062.8 20764.3 21605 20631.7 26271 18415.8 20501.7 16350.1 19424.1 19706.2 TRUE FALSE 20522.26262 19733.17506 22325.29992 18946.02411 25239.46854 19116.62617 17809.80216 18487.11421 21113.57311 19063.18831 1.07653884 1.035145577 1.171120988 0.993853903 1.323989887 1.002803197 0.93425097 0.969780811 1.107557286 1 14.21850181 -6.951564089 24.99996213 0.995826799 1.116443098 0.283312879 0.09287959 147.3945449 76076.42054 0.031908387 0.028140557 1.12E-07 6.951564089 0.120616299 IEEEEEVEQELLSHS(ph)WGR ddPTM_A459_MK2206_30min_R1 6 IEEEEEVEQELLSHSWGR 18 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 IEEEEEVEQELLS(0.237)HS(0.763)WGR;IEEEEEVEQELLSHS(1)WGR;IEEEEEVEQELLS(0.002)HS(0.998)WGR;IEEEEEVEQELLSHS(1)WGR;IEEEEEVEQELLS(0.029)HS(0.971)WGR;IEEEEEVEQELLSHS(1)WGR 286.67 7.67E-69 28265900 12154.38 13823.97 13503.46 12582.82 14026.36 11815.27 13334.04 13794.43 11546.31 11689.9 TRUE FALSE 11120.58616 12924.02704 12586.88276 13551.95098 13467.66038 12484.24038 12444.55052 13673.82675 12746.59024 13138.13307 0.846435799 0.983703466 0.95804196 1.031497467 1.025081746 0.950229406 0.94720844 1.040773958 0.970197986 1 13.68147266 -4.755551007 4.825883332 0.990400583 0.835482196 0.638623202 0.032345603 0.128278977 7.301928875 0.00831501 0.068498124 1.76E-05 4.755551007 -0.154918387 IEEEEEVEQELLSHS(ph)WGR ddPTM_A459_MK2206_30min_R2 1 IEEEEEVEQELLSHSWGR 18 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 IEEEEEVEQELLS(0.237)HS(0.763)WGR 119.94 0.00077473 0 4465.7 4069.3 3598.8 4689.7 3988.2 5208.9 5227.3 914.38 3949 4507.9 TRUE FALSE 4807.597426 3867.224479 3718.782196 4306.536508 3831.603229 5407.12834 4540.949231 1033.892606 4292.476882 4360.807592 1.102455755 0.886813829 0.852773739 0.987554809 0.878645331 1.23993738 1.041309238 0.237087416 0.984330721 1 12.09037962 IEEEEQEPEPPEPFEYIDD ddPTM_A459_MK2206_30min_R1 2 IEEEEQEPEPPEPFEYIDD 19 0 A0A087WW66;Q99460-2;Q99460 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 0 ; 113.07 0.0075632 8713500 8470.1 8001.6 7670.3 6957 8817.7 7279 8003.2 7418 6330.1 6454 FALSE TRUE 7749.673517 7480.694386 7149.661407 7492.829345 8466.472337 7691.13069 7469.321131 7353.145208 6988.136547 7253.570245 1.068394357 1.031312048 0.985674801 1.032985012 1.167214496 1.060323459 1.029744095 1.013727717 0.963406476 1 12.82447556 -7.783338477 2.168956282 0.983781768 1.056075212 0.310121862 0.044355136 0.447159296 4.135864649 0.034260221 0.014128236 1.65E-08 7.783338477 0.072293444 IEEELGS(ph)K ddPTM_A459_MK2206_30min_R1 4 IEEELGSK 8 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 IEEELGS(1)K;IEEELGS(1)K;IEEELGS(1)K;IEEELGS(1)K 142.83 0.0021902 55249000 19304.3 24832.4 22947.2 19922.4 13339 12104.3 18662.1 14570.9 21632.4 21633.3 TRUE FALSE 17662.36791 23215.80625 21389.608 21456.8267 12807.67938 12789.63501 17417.18536 14443.50816 23881.16539 24313.39653 0.726445928 0.954856563 0.87974578 0.882510458 0.526774586 0.526032428 0.716361671 0.59405555 0.982222511 1 14.56946383 -6.214339791 24.9277261 0.693639404 0.868948561 0.125426583 0.164770734 642.47521 340033.1563 0.047689827 0.061567108 6.10E-07 6.214339791 0.175309157 IEEELGS(ph)K ddPTM_A459_MK2206_30min_R2 2 IEEELGSK 8 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 IEEELGS(1)K;IEEELGS(1)K 97.813 0.019965 25373000 121672 90399 104242 83922 87868 51506 127165 96985 60805 109528 TRUE FALSE 130987.3019 85909.91711 107717.3763 77065.30415 84417.86082 53466.09692 110468.0827 109661.2725 66093.70899 105954.1103 1.236264468 0.810821938 1.016641789 0.727346055 0.796739839 0.5046156 1.042603089 1.034988375 0.623795611 1 16.69308003 -2.703245363 1.480163391 0.830023991 200 0.299753239 0.177913204 887.6953311 5.191576488 0.049895591 597212.6897 0.001980408 2.703245363 199.169976 IEEVLSPEGSPSKS(ph)PSK ddPTM_A459_MK2206_30min_R1 1 IEEVLSPEGSPSKSPSK 17 1 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 IEEVLSPEGSPS(0.002)KS(0.986)PS(0.012)K 180.39 3.69E-07 14083000 3906.7 4855.3 4639.2 3902.9 3317.1 2783.2 3797.1 3763.5 5684.9 5438.1 TRUE FALSE 3574.41465 4539.219088 4324.30403 4203.502034 3184.972883 2940.782379 3543.802387 3730.596116 6275.865699 6111.812884 0.584837055 0.742696017 0.707532137 0.687766807 0.521117538 0.48116368 0.579828351 0.610391088 1.026841924 1 12.57738466 -8.260715223 24.94742225 1.013421012 0.615536744 0.810833504 0.077087748 28.29319126 974808.0274 0.068950541 0.022501999 5.49E-09 8.260715223 -0.397884269 IEEVLSPEGSPSKS(ph)PSK ddPTM_A459_MK2206_30min_R2 5 IEEVLSPEGSPSKSPSK 17 1 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 IEEVLSPEGS(0.002)PS(0.094)KS(0.844)PS(0.061)K;IEEVLSPEGS(0.004)PS(0.167)KS(0.816)PS(0.013)K;IEEVLSPEGS(0.005)PS(0.286)KS(0.601)PS(0.108)K;IEEVLSPEGS(0.001)PS(0.011)KS(0.737)PS(0.251)K;IEEVLSPEGS(0.001)PS(0.005)KS(0.957)PS(0.037)K 132.5 0.001107 132179500 358354 358527 390833 352529 313882 224856 376104 308653 250353 385325 TRUE FALSE 385789.8578 340723.0705 403863.1772 323726.253 301557.4155 233413.0526 326721.093 348995.0069 272128.2514 372751.8768 1.03497764 0.914074728 1.083463833 0.868476521 0.809003078 0.626188806 0.876510927 0.936266263 0.730051995 1 18.50785609 -5.925124184 5.846203112 0.820265919 1.000158 0.370459727 0.105143952 0.218187881 12.80074833 0.029802645 0.044596699 1.19E-06 5.925124184 0.179892081 IEEVLSPEGSPSKS(ph)PSKK ddPTM_A459_MK2206_30min_R2 1 IEEVLSPEGSPSKSPSKK 18 2 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 IEEVLSPEGS(0.107)PS(0.092)KS(0.464)PS(0.338)KK 60.209 0.019591 25091000 252210 242630 236130 233680 193910 137100 282600 223710 168420 290270 TRUE FALSE 271519.3915 230581.347 244002.4563 214587.5965 186296.1191 142317.4366 245494.2805 252949.6651 183068.8672 280798.5137 0.966954518 0.82116299 0.868959216 0.764204887 0.663451229 0.506831161 0.874272009 0.900822664 0.651958106 1 18.09917577 -4.90778042 1.164383279 0.755926966 1.013751997 0.146168581 0.135965971 2.486246538 3.314888708 0.043845367 0.742805232 1.24E-05 4.90778042 0.257825031 IEEVPELPLVVEDKVEGYKK ddPTM_A459_MK2206_30min_R1 1 IEEVPELPLVVEDKVEGYKK 20 2 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 0 103.39 0.00037084 7049200 5908.9 6498.3 7077.7 6930.9 6549.7 5599.5 5551.2 6501 5043.4 4758.6 FALSE TRUE 5406.317026 6075.259489 6597.285444 7464.719119 6288.81158 5916.538851 5180.889577 6444.162442 5567.679478 5348.131294 1.010879638 1.135959302 1.23356834 1.395762129 1.175889527 1.106281526 0.968728943 1.204937218 1.041051383 1 12.38481917 -6.801090932 3.871657012 1.067687734 1.202384867 0.262156875 0.106808204 0.338632841 10.67919266 0.040920839 0.037200038 1.58E-07 6.801090932 0.134697133 IEFADLSPS(ph)PSSFEK ddPTM_A459_MK2206_30min_R2 1 IEFADLSPSPSSFEK 15 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 IEFADLS(0.028)PS(0.638)PS(0.193)S(0.141)FEK 89.232 0.016809 3625500 25934 25589 33699 28692 26643 25391 25471 18326 22070 25961 TRUE FALSE 27919.52698 24318.28747 34822.50784 26347.77182 25596.86195 26357.2723 22126.6271 20721.27112 23989.60871 25113.8947 1.111716335 0.968320038 1.386583334 1.049131253 1.019231077 1.049509549 0.881051202 0.825091901 0.955232512 1 14.61619816 -6.776267646 1.386158741 0.904453673 1.132364662 0.39992789 0.111953088 0.409973795 1.645623416 0.053292199 0.047536875 1.67E-07 6.776267646 0.227910989 IEGEMQVPDVDIR ddPTM_A459_MK2206_30min_R1 3 IEGEMQVPDVDIR 13 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ;; 209.85 2.54E-28 3644900 3161.93 2887.6 2806.3 2705.66 3435.2 3372.39 3771 2806.58 2564.08 2638.03 FALSE TRUE 2892.99125 2699.616715 2615.816175 2914.050402 3298.36871 3563.331807 3519.443471 2782.042367 2830.625292 2964.849073 0.975763413 0.910541026 0.882276335 0.982866355 1.11249127 1.201859427 1.187056536 0.938341986 0.954728292 1 11.53374295 -6.049308513 4.43867172 1.074720285 0.922261922 0.359633747 0.085761333 0.246516492 10.4157524 0.028679055 0.039071119 8.93E-07 6.049308513 -0.152458363 IEHAPS(ph)PSSGGTLK ddPTM_A459_MK2206_30min_R1 2 IEHAPSPSSGGTLK 14 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8Y7Y0;A0A2R8YCQ1;A0A2R8YD28 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 IEHAPS(0.991)PS(0.007)S(0.002)GGTLK;IEHAPS(0.961)PS(0.032)S(0.007)GGTLK 90.725 0.017883 25363200 15301.8 13869.6 13012.6 11206.4 12388.2 12415.2 14992.7 11918.5 14289 15007.4 TRUE FALSE 14000.30156 12966.68652 12129.34097 12069.51887 11894.75176 13118.13789 13992.56434 11814.29781 15774.39268 16866.63001 0.830059208 0.768777551 0.71913245 0.715585678 0.705223969 0.777756901 0.829600479 0.700453962 0.935242705 1 14.04188413 -8.40061722 4.264088752 0.997033427 0.755539033 0.779251748 0.045568083 0.098562573 2.747073726 0.045525028 0.011948088 3.98E-09 8.40061722 -0.241494394 IEHAPS(ph)PSSGGTLK ddPTM_A459_MK2206_30min_R2 3 IEHAPSPSSGGTLK 14 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8Y7Y0;A0A2R8YCQ1;A0A2R8YD28 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 IEHAPS(0.874)PS(0.125)S(0.002)GGTLK;IEHAPS(0.991)PS(0.008)SGGTLK;IEHAPS(0.963)PS(0.03)S(0.007)GGTLK 101.61 0.0081704 110388000 519990 527440 470767 498770 482090 408798 544170 418034 368536 532450 TRUE FALSE 559800.8342 501248.0966 486462.1368 458018.8955 463160.7243 424355.0943 472719.8253 472672.4791 400590.5951 515076.2001 1.086831102 0.973153286 0.944446932 0.889225508 0.899208164 0.823868574 0.917766779 0.917674859 0.777730742 1 18.97442635 -4.391047205 0.873781377 0.882748316 1.345565872 0.536499453 0.056321304 2.970659794 1.108164483 0.018641566 1.547574872 4.06E-05 4.391047205 0.462817556 IEHAPSPS(ph)SGGTLK ddPTM_A459_MK2206_30min_R2 1 IEHAPSPSSGGTLK 14 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8Y7Y0;A0A2R8YCQ1;A0A2R8YD28 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 IEHAPS(0.172)PS(0.375)S(0.375)GGT(0.078)LK 113.37 0.004378 0 77948 68054 54015 64745 60462 52173 70293 51356 44021 61538 TRUE FALSE 83915.75881 64674.53732 55815.83314 59455.12639 58087.95808 54158.48007 61063.44466 58068.40553 47849.86701 59530.0201 1.40963767 1.086418873 0.937608169 0.998741917 0.975775886 0.909767542 1.025758845 0.975447437 0.8037939 1 15.86132976 -4.746660642 2.144150479 0.955312226 1.560485138 0.842853074 0.059613852 0.272177322 1.324973805 0.015565767 0.332012279 1.79E-05 4.746660642 0.605172912 IEHSFWR ddPTM_A459_MK2206_30min_R1 2 IEHSFWR 7 0 Q16531-2;Q16531 Q16531-2 DDB1 DNA damage-binding protein 1 0 ; 147.69 0.0040935 11509800 8948.1 10115.1 10642.4 8856.3 9107.8 9599.1 10203.7 9462.8 8454.7 7211.9 FALSE TRUE 8187.017107 9456.605151 9920.023539 9538.413761 8745.01704 10142.59275 9523.029791 9380.067737 9333.59632 8105.364619 1.010073882 1.166709407 1.223883688 1.176802551 1.078917168 1.251343181 1.174904553 1.157266598 1.151533183 1 12.98466137 -9.042871324 2.37938662 1.000001126 1.159629202 0.336995874 0.064811307 10.46146326 46.44663312 0.062085834 0.016802499 9.06E-10 9.042871324 0.159628076 IEHSFWR ddPTM_A459_MK2206_30min_R2 1 IEHSFWR 7 0 Q16531-2;Q16531 Q16531-2 DDB1 DNA damage-binding protein 1 0 94.662 0.034128 2745400 11729 17013 14935 20059 19213 18418 16774 13576 15089 16388 FALSE TRUE 12626.98126 16168.15916 15432.92545 18420.11553 18458.60108 19118.9099 14571.55365 15350.42981 16401.41395 15853.2609 0.796491103 1.019863311 0.973485868 1.161913353 1.164340964 1.205992257 0.919151823 0.968282167 1.034576675 1 13.952492 -4.356501247 1.468359262 1.062165836 0.330507519 0.416159162 0.090715061 3.865053221 3.333812306 0.028312382 5.615272981 4.40E-05 4.356501247 -0.731658317 IENHEGVR ddPTM_A459_MK2206_30min_R1 6 IENHEGVR 8 0 P14618;P14618-3;B4DNK4;H3BQ34;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;;;; 158.87 0.00068961 104418500 38665 26960.6 25806.2 35826.8 13049.91 19848.6 36472.6 53200.7 1362.09 17335.1 FALSE TRUE 35376.33871 25205.46004 24054.54704 38586.18634 12530.10445 20972.41058 34039.5794 52735.57189 1503.68413 19482.70306 1.815781855 1.293735267 1.234661688 1.980535566 0.643139939 1.076463082 1.747169235 2.706789285 0.077180467 1 14.24990623 -8.294993439 24.99691787 0.538590249 1.515684819 0.335486305 0.573301413 893.6140054 665711.8608 0.55720256 0.14390284 5.07E-09 8.294993439 0.977094571 IENHEGVR ddPTM_A459_MK2206_30min_R2 6 IENHEGVR 8 0 P14618;P14618-3;B4DNK4;H3BQ34;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;;;; 146.23 0.0026412 339476900 560623 580793 537376 532838 552106 459423 546657 660376 657049 598231 FALSE TRUE 603544.7279 551951.6642 555291.8476 489303.4309 530427.5443 476906.6642 474880.2792 746689.4106 714197.9343 578710.7715 1.042912553 0.953760827 0.959532594 0.845506002 0.916567602 0.824084651 0.820583101 1.290263543 1.234118958 1 19.14248297 -7.760603508 24.99999999 1.196643465 0.907242054 0.618895623 0.09511357 13.45411263 402441.7541 0.048204812 0.025732328 1.74E-08 7.760603508 -0.289401411 IEPEPFENCLLRPGS(ph)PAR ddPTM_A459_MK2206_30min_R1 4 IEPEPFENCLLRPGSPAR 18 1 A0A2R8Y5T7;A0A2R8Y430;P48637-2;P48637 A0A2R8Y5T7 GSS Glutathione synthetase 1 IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR 155.16 1.48E-05 46962700 9692.6 9911.9 10302.1 7476.5 10312.7 8900 11055.4 9845.8 10639.3 11698.1 TRUE FALSE 8868.193472 9266.633508 9602.822155 8052.341325 9901.923321 9403.910309 10317.91444 9759.719209 11745.29331 13147.34894 0.674523321 0.704829053 0.730399885 0.612468822 0.753149807 0.715270459 0.784790491 0.742333626 0.8933583 1 13.6824843 -8.431946225 0.666596134 1.005583539 0.689892495 0.851587477 0.040649684 0.261522679 0.270536791 0.038910972 0.016223273 3.70E-09 8.431946225 -0.315691045 IEPEPFENCLLRPGS(ph)PAR ddPTM_A459_MK2206_30min_R2 2 IEPEPFENCLLRPGSPAR 18 1 A0A2R8Y5T7;A0A2R8Y430;P48637-2;P48637 A0A2R8Y5T7 GSS Glutathione synthetase 1 IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR 85.969 0.0040883 34445000 63492 73691 67554 76292 63794 72162 59507 55362 68444 71279 TRUE FALSE 68352.99634 70031.6121 69806.21664 70058.69955 61289.12702 74908.17548 51693.65942 62598.00349 74397.1354 68953.17207 0.991295894 1.01564018 1.012371361 1.016033019 0.888851451 1.086363009 0.74969226 0.907833557 1.078951601 1 16.0733293 -6.226281827 23.54243832 0.943948205 1.009573812 0.080636733 0.091730815 740.2626766 495698.2492 0.02706081 0.034932992 5.94E-07 6.226281827 0.065625607 IEPGTST(ph)PR ddPTM_A459_MK2206_30min_R1 1 IEPGTSTPR 9 0 Q86X27;Q86X27-3;H7C2H2;A0A0A0MR31 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 IEPGT(0.002)S(0.017)T(0.982)PR 114.4 0.010682 0 5356.5 4472.1 4388.5 3625.2 4109.2 3850.2 4427.9 3431.5 3609.1 3549 TRUE FALSE 4900.901547 4180.965477 4090.620847 3904.413532 3945.521863 4068.194997 4132.52287 3401.498757 3984.27886 3988.676914 1.228703566 1.048208608 1.025558333 0.978874353 0.98918061 1.019935955 1.036063577 0.852788739 0.998897365 1 11.96169455 -1.52288333 0.87342024 0.977971477 104.7764538 0.702846547 0.047534915 424.5471922 1.060169127 0.01646588 87698.91502 0.029999683 1.52288333 103.7984823 IEPIPGES(ph)PK ddPTM_A459_MK2206_30min_R1 4 IEPIPGESPK 10 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 IEPIPGES(1)PK;IEPIPGES(1)PK;IEPIPGES(1)PK;IEPIPGES(1)PK 137.4 0.0017508 42964900 17553.8 24286.5 25848.2 21158.5 12053.6 10609.5 15426.9 15682.1 21382.6 17929.1 TRUE FALSE 16060.75713 22705.44444 24093.6962 22788.13134 11573.47959 11210.20072 14397.79965 15544.99305 23605.39779 20150.29227 0.797048346 1.12680472 1.19569959 1.130908229 0.574357902 0.556329436 0.714520636 0.771452486 1.17146677 1 14.29851314 -6.243847347 24.72657452 0.770334206 1.076706236 0.289676247 0.199697417 856.9052651 1204427.329 0.061478774 0.079177146 5.70E-07 6.243847347 0.30637203 IEPIPGES(ph)PK ddPTM_A459_MK2206_30min_R2 3 IEPIPGESPK 10 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 IEPIPGES(1)PK;IEPIPGES(1)PK;IEPIPGES(1)PK 140.63 0.0013973 30050000 348810 305423 350720 264550 268492 177921 331081 258546 221707 336363 TRUE FALSE 375515.1618 290256.1379 362412.8298 242935.4187 257949.655 184691.9083 287609.667 292338.8499 240990.6741 325387.5029 1.154055268 0.892032224 1.113788411 0.746603409 0.792746042 0.567606029 0.883898934 0.898432937 0.740626705 1 18.31179932 -5.765760407 24.99922344 0.793017737 1.037166008 0.447807164 0.125905125 97.31984824 563046.6995 0.03458621 0.053383206 1.71E-06 5.765760407 0.244148271 IERPGEGS(ph)PMVDNPMR ddPTM_A459_MK2206_30min_R1 2 IERPGEGSPMVDNPMR 16 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 IERPGEGS(1)PMVDNPMR;IERPGEGS(1)PMVDNPMR 111.7 0.012227 25879800 3490.2 3398.07 3340.8 2986.11 2859 2716.05 2980.59 2822.3 3354.14 3083.33 TRUE FALSE 3193.340162 3176.855025 3114.035804 3216.10071 2745.119976 2869.830404 2781.760279 2797.624929 3702.814856 3465.316198 0.9215148 0.916757619 0.898629627 0.928082901 0.792170128 0.828158309 0.802743565 0.80732169 1.068535927 1 11.75877128 -8.265520067 24.99620712 1.034267982 0.861755935 0.636675173 0.052077221 256.0034489 1568113.122 0.049378252 0.014558334 5.43E-09 8.265520067 -0.172512048 IERPGEGS(ph)PMVDNPMR ddPTM_A459_MK2206_30min_R2 1 IERPGEGSPMVDNPMR 16 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 IERPGEGS(1)PMVDNPMR 71.969 0.021203 4453000 26427 33746 27307 27738 25349 20907 31198 23152 22573 36047 TRUE FALSE 28450.27144 32070.22271 28217.40175 25471.71667 24353.67089 21702.63054 27101.66512 26178.04589 24536.35874 34870.78934 0.815876898 0.919687318 0.809198825 0.730459997 0.698397465 0.622372792 0.777202514 0.75071561 0.703636459 1 15.0897314 -5.571149833 3.867931703 0.737769537 0.86821749 0.167047071 0.095995743 0.292941964 9.14718134 0.025077607 0.047802652 2.68E-06 5.571149833 0.130447953 IERS(ph)PLLDQVQTFLPQMAR ddPTM_A459_MK2206_30min_R1 1 IERSPLLDQVQTFLPQMAR 19 1 Q8N5I9;A0A087WT30 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 IERS(1)PLLDQVQTFLPQMAR 88.319 0.0017383 3805400 1014.4 1095.4 1297.4 901.43 1207 940.41 975.85 926.81 876.37 869.42 TRUE FALSE 928.1199532 1024.089261 1209.336103 970.8582948 1158.922634 993.6552015 910.752827 918.7069979 967.4717976 977.1303134 0.949842555 1.048058019 1.237640554 0.993581185 1.186047161 1.016911652 0.932068952 0.94020929 0.990115427 1 9.932407167 -6.99571902 24.97592097 0.962597912 1.086387361 0.320580936 0.08070044 139.1974313 812093.1014 0.028263072 0.024828164 1.01E-07 6.99571902 0.123789449 IES(ph)DEEEDFENVGK ddPTM_A459_MK2206_30min_R1 7 IESDEEEDFENVGK 14 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK 243.92 6.09E-20 280020200 14294.12 16529.54 16774.43 13885.39 11789.13 9796.05 13081.85 13284.72 14263.93 12844.41 TRUE FALSE 13078.33003 15453.46394 15635.82843 14954.84514 11319.54399 10350.69389 12209.18366 13168.57309 15746.71657 14435.67248 0.905973037 1.070505303 1.083138208 1.035964564 0.784136936 0.71702194 0.8457648 0.91222443 1.090819744 1 13.8173507 -6.238308662 24.00511311 0.876245738 1.031456243 0.255636388 0.108341657 629.06761 652846.9387 0.034089862 0.043975292 5.78E-07 6.238308662 0.155210505 IES(ph)DEEEDFENVGK ddPTM_A459_MK2206_30min_R2 5 IESDEEEDFENVGK 14 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK 238.02 2.12E-19 52300400 119967.5 125177.6 135860.5 118478.1 122043.6 89922.2 137939.2 106335.5 94303.3 131388.6 TRUE FALSE 129152.304 118961.4624 140390.0213 108798.0602 117251.555 93344.25233 119827.6173 120233.915 102505.6306 127101.4007 1.016135961 0.935957131 1.10455133 0.855994187 0.922504035 0.734407739 0.942771808 0.945968449 0.806487025 1 16.9556204 -5.78185609 24.99772709 0.88208547 1.010589075 0.35459737 0.081200731 251.6184185 308074.6448 0.022200874 0.032974214 1.65E-06 5.78185609 0.128503606 IES(ph)DVQEPTEPEDDLDIMLGNK ddPTM_A459_MK2206_30min_R1 3 IESDVQEPTEPEDDLDIMLGNK 22 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 IES(1)DVQEPTEPEDDLDIMLGNK;IES(1)DVQEPTEPEDDLDIMLGNK;IES(1)DVQEPTEPEDDLDIMLGNK 196.22 2.26E-22 12356600 6134.3 6186 6237 5172.98 5332.4 4738.5 6268.5 5666.5 5802.2 6137.8 TRUE FALSE 5612.545573 5783.290276 5813.649817 5571.403816 5119.999216 5006.789775 5850.339803 5616.958388 6405.359453 6898.197002 0.813625005 0.838377082 0.842778166 0.807660873 0.742222818 0.725811364 0.848096945 0.814264711 0.9285556 1 12.75200362 -8.400878306 1.824233803 1.000770284 0.800119352 0.748999226 0.038277215 0.18011839 1.248039461 0.040549182 0.011673437 3.97E-09 8.400878306 -0.200650932 IES(ph)LSSQLSNLQK ddPTM_A459_MK2206_30min_R2 2 IESLSSQLSNLQK 13 0 P20700;E9PBF6;A0A0D9SFE5 P20700 LMNB1 Lamin-B1 1 IES(0.851)LS(0.054)S(0.077)QLS(0.018)NLQK;IES(0.751)LS(0.003)S(0.001)QLS(0.246)NLQK 127.03 0.0018081 2518100 25689 25741 24520 26633 26350 23005 28621 19245.2 22542 24895 TRUE FALSE 27655.76959 24462.73937 25337.48456 24456.99871 25315.3666 23880.4714 24863.02832 21760.61372 24502.66241 24082.67819 1.148367693 1.015781516 1.052104104 1.015543143 1.051185686 0.991603642 1.032402963 0.903579475 1.017439266 1 14.55570822 -1.522878745 0.409837475 0.986016962 3.307776099 0.507326629 0.040541543 63.67452983 0.830949601 0.027881861 120.2865052 0.03 1.522878745 2.321759136 IESDVQEPT(ph)EPEDDLDIMLGNK ddPTM_A459_MK2206_30min_R1 5 IESDVQEPTEPEDDLDIMLGNK 22 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 IESDVQEPT(1)EPEDDLDIMLGNK;IES(0.004)DVQEPT(0.996)EPEDDLDIMLGNK;IESDVQEPT(1)EPEDDLDIMLGNK;IESDVQEPT(1)EPEDDLDIMLGNK;IES(0.415)DVQEPT(0.585)EPEDDLDIMLGNK 158.88 6.15E-09 48373200 11220.53 11082.09 10588.44 9043.36 10539.02 9867.31 10253.7 10154.01 10404.91 9276.51 TRUE FALSE 10266.165 10360.64393 9869.726194 9739.881154 10119.22852 10425.98857 9569.694382 10065.23456 11486.53763 10425.75409 0.984692801 0.993754872 0.946667848 0.934213589 0.970599194 1.00002249 0.9178899 0.965420292 1.101746457 1 13.34786412 -8.234884774 22.9056482 1.050873181 0.963431003 0.518906572 0.033392667 169.8444562 146506.3695 0.021966085 0.008294115 5.82E-09 8.234884774 -0.087442178 IESDVQEPT(ph)EPEDDLDIMLGNK ddPTM_A459_MK2206_30min_R2 2 IESDVQEPTEPEDDLDIMLGNK 22 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 IESDVQEPT(1)EPEDDLDIMLGNK;IES(0.002)DVQEPT(0.998)EPEDDLDIMLGNK 132.33 2.95E-05 3463300 68741 69181 67580 70754 69145 64680 78274 59761 60072 68630 TRUE FALSE 74003.86381 65745.57214 69833.08347 64973.17187 66430.01987 67141.44272 67996.52978 67571.96789 65296.95397 66390.60872 1.114673675 0.990284219 1.051851833 0.97865004 1.000593625 1.011309341 1.024188979 1.01779407 0.983526966 1 16.01869156 -4.755578784 24.99969559 1.008093283 1.114673847 0.715159376 0.02046375 101.5257833 433037.7344 0.004912499 0.04306392 1.76E-05 4.755578784 0.106580565 IESDVQEPT(ph)EPEDDLDIMLGNKK ddPTM_A459_MK2206_30min_R1 2 IESDVQEPTEPEDDLDIMLGNKK 23 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 IESDVQEPT(1)EPEDDLDIMLGNKK;IESDVQEPT(1)EPEDDLDIMLGNKK 148.72 1.29E-07 13894500 3371.02 2936.36 3164.14 2990.78 3244.6 2520.24 2736.83 2987.39 2271.73 1565.62 TRUE FALSE 3084.297047 2745.20243 2949.366993 3221.130394 3115.360711 2662.933811 2554.261064 2961.271564 2507.884463 1759.580825 1.752858978 1.560145684 1.676175911 1.830623719 1.770512992 1.513391015 1.451630427 1.682941483 1.425273808 1 10.78101607 -9.513503811 0.379718746 0.877869418 1.714962148 0.78548587 0.106488033 2.219353171 0.438661633 0.525024112 0.088476342 3.07E-10 9.513503811 0.83709273 IESDVQEPT(ph)EPEDDLDIMLGNKK ddPTM_A459_MK2206_30min_R2 2 IESDVQEPTEPEDDLDIMLGNKK 23 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 IESDVQEPT(1)EPEDDLDIMLGNKK;IESDVQEPT(1)EPEDDLDIMLGNKK 108.37 2.25E-05 5025000 46127 66717 54853 64162 62766 54964.2 67694 47868.9 52411 56333 TRUE FALSE 49658.51859 63403.9308 56681.77164 58919.75936 60301.49147 57055.90115 58805.69648 54125.52959 56969.61404 54494.85882 0.91125144 1.163484633 1.040130626 1.081198495 1.10655377 1.046996036 1.079105401 0.993222677 1.045412637 1 15.73383251 -7.755698943 25 1.01448824 1.066327878 0.110137609 0.061781171 271.6971926 1183274.652 0.027902087 0.015554768 1.76E-08 7.755698943 0.051839638 IET(ph)DEEESCDNAHGDANQPAR ddPTM_A459_MK2206_30min_R1 2 IETDEEESCDNAHGDANQPAR 21 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 IET(0.99)DEEES(0.01)CDNAHGDANQPAR;IET(0.715)DEEES(0.285)CDNAHGDANQPAR 169.88 3.12E-10 27148800 2327.66 2276.32 2620.2 2231.23 2253.5 2239.9 2401.1 2206.21 2043.06 1825.81 TRUE FALSE 2129.680294 2128.131154 2442.348124 2403.079721 2163.738323 2366.721202 2240.927 2186.921339 2255.443398 2052.005127 1.037853301 1.037098361 1.190225157 1.171088556 1.054450739 1.153370024 1.09206696 1.065748477 1.09914121 1 11.00281862 -9.175888083 0.715550743 0.998332553 1.107286977 0.251956864 0.052033091 3.476793884 2.583002122 0.070813003 0.020098437 6.67E-10 9.175888083 0.108954425 IET(ph)DEEESCDNAHGDANQPAR ddPTM_A459_MK2206_30min_R2 2 IETDEEESCDNAHGDANQPAR 21 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 IET(0.998)DEEES(0.002)CDNAHGDANQPAR;IET(0.997)DEEES(0.003)CDNAHGDANQPAR 139.12 3.25E-05 167754000 22507 26767.3 29738.8 28825.8 31670.8 27988 34198.7 34609 29223.9 34932 TRUE FALSE 24230.15322 25438.07481 30730.27675 26470.63993 30427.24526 29053.10295 29708.36961 39132.51513 31765.742 33792.1717 0.717034508 0.752780112 0.909390406 0.783336453 0.900422901 0.859758385 0.879149463 1.158034928 0.94003257 1 15.04440145 -6.75234649 0.533008682 1.039527999 0.745907405 0.578216618 0.079031872 0.704829052 0.43052079 0.069729388 0.088286468 1.77E-07 6.75234649 -0.293620593 IETDEEES(ph)CDNAHGDANQPAR ddPTM_A459_MK2206_30min_R2 1 IETDEEESCDNAHGDANQPAR 21 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 IET(0.037)DEEES(0.963)CDNAHGDANQPAR 88.504 0.0029914 0 4873.1 5733.7 5204.1 6829.9 4861.9 7089.5 6726.5 6818.2 4167.1 7537.9 TRUE FALSE 5246.188283 5448.972796 5377.602097 6271.875322 4670.997377 7359.29589 5843.30247 7709.36215 4529.546826 7291.93894 0.719450386 0.747259795 0.737472179 0.860110784 0.640570007 1.00923718 0.801337274 1.057244474 0.621171798 1 12.83208677 -6.75985793 24.99962935 0.895347112 0.747746245 0.277809148 0.126159795 58.35148803 922427.794 0.039649194 0.03766669 1.74E-07 6.75985793 -0.147600867 IETIAASS(ph)TPTPIRK ddPTM_A459_MK2206_30min_R1 1 IETIAASSTPTPIRK 15 1 Q96P47;Q96P47-2;Q96P47-4;Q96P47-5;H7C5G0;H7C4U6;E7ESL9;Q96P47-3;Q96P47-6 Q96P47 AGAP3 "Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3" 1 IETIAAS(0.084)S(0.617)T(0.298)PTPIRK 106.29 0.0081182 10859000 3273.7 3810.8 3089.8 3156.6 4202.7 4482.8 4593.3 4451.4 2923.4 3155.1 TRUE FALSE 2995.254624 3562.716227 2880.072985 3399.721879 4035.29756 4736.612262 4286.889338 4412.481879 3227.297891 3545.977608 0.844690789 1.004720453 0.812208452 0.958754469 1.137992962 1.335770494 1.208944278 1.24436259 0.910129236 1 11.79196771 -6.215494875 3.676600405 1.16682348 0.898409835 0.46170026 0.123513715 0.198464924 5.601666643 0.037995609 0.048674447 6.09E-07 6.215494875 -0.268413645 IETIAASST(ph)PTPIR ddPTM_A459_MK2206_30min_R1 2 IETIAASSTPTPIR 14 0 Q96P47;Q96P47-2;Q96P47-4;Q96P47-5;H7C5G0;H7C4U6;E7ESL9;Q96P47-3;Q96P47-6 Q96P47 AGAP3 "Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3" 1 IETIAAS(0.005)S(0.032)T(0.962)PT(0.001)PIR;IETIAAS(0.022)S(0.153)T(0.753)PT(0.072)PIR 155.14 0.0007732 17926800 4523.4 5255.6 4351.5 4120.2 5188.1 5727.4 6110.7 5440.6 4798 5560.5 TRUE FALSE 4138.661077 4913.459485 4056.132304 4437.538518 4981.446991 6051.680438 5703.066353 5393.033408 5296.76927 6249.37672 0.662251815 0.786231924 0.649045895 0.710076975 0.79711101 0.96836544 0.912581623 0.862971405 0.847567607 1 12.60949659 -6.513743228 3.49409243 0.909002519 0.705860382 0.775227924 0.054767588 0.117088874 3.036952469 0.018412862 0.019682406 3.06E-07 6.513743228 -0.203142137 IETIAASST(ph)PTPIR ddPTM_A459_MK2206_30min_R2 1 IETIAASSTPTPIR 14 0 Q96P47;Q96P47-2;Q96P47-4;Q96P47-5;H7C5G0;H7C4U6;E7ESL9;Q96P47-3;Q96P47-6 Q96P47 AGAP3 "Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3" 1 IETIAAS(0.004)S(0.023)T(0.971)PT(0.002)PIR 187.63 0.00020824 9354700 35812 37088 42800 42288 34856 45161 36613 29130 39391 53709 TRUE FALSE 38553.79425 35246.26385 44226.93064 38832.93513 33487.3783 46879.6335 31805.66912 32937.39102 42817.15798 51956.47973 0.742040155 0.678380522 0.851230316 0.747412745 0.644527468 0.902286563 0.612159817 0.63394193 0.824096594 1 15.66501606 -8.541107589 14.66094482 1.000000005 0.72906039 0.47519535 0.088241493 8.360577932 6725.435821 0.084315744 0.021770672 2.88E-09 8.541107589 -0.270939615 IETIAASST(ph)PTPIRK ddPTM_A459_MK2206_30min_R1 1 IETIAASSTPTPIRK 15 1 Q96P47;Q96P47-2;Q96P47-4;Q96P47-5;H7C5G0;H7C4U6;E7ESL9;Q96P47-3;Q96P47-6 Q96P47 AGAP3 "Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3" 1 IETIAAS(0.183)S(0.183)T(0.631)PT(0.002)PIRK 188.09 0.0031338 8208700 2921.3 3040.8 2686.7 2980.1 4020.3 3366.3 3911.2 3532.1 2364.8 2949.8 TRUE FALSE 2672.828095 2842.843367 2504.33429 3209.627818 3860.162938 3556.896997 3650.290984 3501.219222 2610.629423 3315.243494 0.806223766 0.857506658 0.755399805 0.968142408 1.16436785 1.07289163 1.10106271 1.056097155 0.787462347 1 11.69489912 -5.917624207 5.07135525 1.041104852 0.813563735 0.519207588 0.095828109 0.163382936 7.3228867 0.027973104 0.042117392 1.21E-06 5.917624207 -0.227541118 IETIEVMEDR ddPTM_A459_MK2206_30min_R1 4 IETIEVMEDR 10 0 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ;;; 190.88 0.00097923 39262200 8133 7779.9 8233.5 6853 8045.4 7472.4 8030.6 7333.1 6662.2 6346.2 FALSE TRUE 7441.245642 7273.427096 7674.63296 7380.819247 7724.934682 7895.48083 7494.893327 7268.98748 7354.759531 7132.415167 1.043299565 1.019770572 1.076021625 1.034827485 1.083074176 1.106985593 1.050821237 1.019148116 1.031173783 1 12.80017497 -7.705279796 4.498006432 1.018495764 1.060718582 0.388346204 0.024598464 0.241915374 9.944090937 0.013582348 0.007267596 1.97E-08 7.705279796 0.042222817 IETIEVMEDR ddPTM_A459_MK2206_30min_R2 3 IETIEVMEDR 10 0 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ;; 170.47 0.0028245 28158900 54190 61384 58159 69601 60593 59905 59353 49304 57896 62601 FALSE TRUE 58338.82807 58335.75982 60097.99203 63914.37566 58213.81436 62184.72675 51559.8798 55748.20209 62931.68943 60558.3345 0.963349282 0.963298616 0.992398363 1.05541832 0.96128493 1.026856621 0.851408485 0.920570266 1.039191219 1 15.88603791 IEVDEGFCS(ph)PKPSEIK ddPTM_A459_MK2206_30min_R1 1 IEVDEGFCSPKPSEIK 16 1 Q9UHV7 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 1 IEVDEGFCS(0.977)PKPS(0.023)EIK 69.261 0.025117 16877000 3482.7 4302.7 4495.6 4058.8 2130.7 2179.6 3206.4 2587.4 4431 5278.9 TRUE FALSE 3186.478077 4022.593448 4190.451197 4371.409479 2045.829707 2303.007068 2992.506906 2564.778635 4891.618306 5932.889986 0.537086999 0.67801585 0.706308596 0.736809462 0.344828526 0.388176264 0.504392786 0.432298364 0.824491659 1 12.53451932 -8.467006966 4.163866079 0.997815202 0.545895123 0.59311749 0.126836266 0.147985218 5.271164449 0.137796941 0.036091813 3.41E-09 8.467006966 -0.451920079 IEVEKPFAIAK ddPTM_A459_MK2206_30min_R2 1 IEVEKPFAIAK 11 1 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 91.469 0.034654 0 31409 30287 35031 43371 28990 32947 35953 33304 23454 40578 FALSE TRUE 33813.69719 28782.99162 36198.91606 39827.45056 27851.70694 34200.82117 31232.32791 37656.94715 25493.98652 39253.94318 0.86140893 0.733250963 0.922172733 1.014610185 0.709526348 0.87127097 0.795648166 0.95931629 0.649463072 1 15.26054996 -6.277752699 24.95200623 0.829095519 0.874982321 0.043240873 0.117312739 3458.698327 5290229.38 0.035496655 0.040357119 5.28E-07 6.277752699 0.045886802 IEVIEIMTDR ddPTM_A459_MK2206_30min_R1 2 IEVIEIMTDR 10 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8VZ49;Q32P51;A0A2R8Y4L2;H0YH80;F8VYN5 F8W6I7 HNRNPA1;HNRNPA1L2 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2" 0 ; 170.47 0.0028245 35889000 4192.4 5018.1 5147.8 4957.3 5249.3 4448.3 4524 4334.9 3385.4 3555 FALSE TRUE 3835.814365 4691.420778 4798.381679 5339.112105 5040.209265 4700.158902 4222.212215 4297.000426 3737.324445 3995.420239 0.960052794 1.174199583 1.200970459 1.336308019 1.261496655 1.176386618 1.056762984 1.075481469 0.935402091 1 11.96413154 -7.522737875 1.686992909 0.989684604 1.196567289 0.441201086 0.094399394 0.378347038 2.096081292 0.065658541 0.032084369 3.00E-08 7.522737875 0.206882685 IEVIEIMTDR ddPTM_A459_MK2206_30min_R2 2 IEVIEIMTDR 10 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8VZ49;Q32P51;A0A2R8Y4L2;H0YH80;F8VYN5 F8W6I7 HNRNPA1;HNRNPA1L2 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2" 0 ; 176.33 0.00092728 12639900 31181.7 43284 38574 41708 40403 48218 43237 34257.9 37047 39936 FALSE TRUE 33568.99493 41134.5795 39860.03791 38300.32298 38816.57521 50052.96978 37559.92996 38735.52515 40269.28109 38632.89159 0.86892266 1.064755389 1.031764289 0.991391568 1.004754592 1.295605059 0.972226733 1.002656637 1.042357417 1 15.23754204 -4.758025008 24.90727987 1.047341692 0.868922398 0.265709766 0.087766602 131.1583374 956620.4702 0.022148051 0.156042852 1.75E-05 4.758025008 -0.178419293 IEVLDS(ph)PASK ddPTM_A459_MK2206_30min_R1 4 IEVLDSPASK 10 0 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 IEVLDS(0.997)PAS(0.003)K;IEVLDS(1)PASK;IEVLDS(0.999)PAS(0.001)K;IEVLDS(0.998)PAS(0.002)K 180.24 0.00011142 131436000 32150.7 32257.7 30168.2 24201.1 24778.4 22532.1 27337.4 26485.9 27727.6 29658.9 TRUE FALSE 29416.11413 30157.71787 28120.46664 26065.07292 23791.42386 23807.84803 25513.77193 26254.33657 30609.98324 33333.26845 0.882485142 0.904733297 0.843615641 0.78195371 0.713744105 0.714236831 0.765414648 0.78763163 0.918301285 1 15.02467517 -10.52260085 6.614022941 1.000000047 0.807284669 0.390729212 0.069989078 5.40E-08 8.13E-09 0.075951768 0.018421005 3.00E-11 10.52260085 -0.192715378 IEVLDS(ph)PASK ddPTM_A459_MK2206_30min_R2 3 IEVLDSPASK 10 0 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 IEVLDS(0.94)PAS(0.06)K;IEVLDS(0.97)PAS(0.03)K;IEVLDS(0.835)PAS(0.165)K 140.45 0.0014164 13110100 170179 156583 154607 159742 151045 141987 183560 136588 127804 177919 TRUE FALSE 183208.0351 148807.3159 159761.5202 146690.5676 145114.2144 147390.4148 159458.3515 154440.5206 138920.1609 172113.5176 1.064460466 0.864588197 0.928233427 0.852289638 0.843130838 0.856355833 0.92647198 0.897317786 0.807142651 1 17.39300088 -4.758069815 24.98665322 0.882199698 1.064460721 0.511220617 0.052170136 73.30684896 543512.2326 0.01226532 0.086263952 1.75E-05 4.758069815 0.182261023 IEVLDS(ph)PASKK ddPTM_A459_MK2206_30min_R1 1 IEVLDSPASKK 11 1 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 IEVLDS(0.96)PAS(0.04)KK 128.54 0.00495 12367000 2558.7 2717.9 2783.6 2472.3 1864.8 1606.4 2094.1 2135.8 2087.8 2279.1 TRUE FALSE 2341.069129 2540.964216 2594.656988 2662.716974 1790.521067 1697.35298 1954.40641 2117.126926 2304.834281 2561.452114 0.9139617 0.992001452 1.0129633 1.039534161 0.699025782 0.66265263 0.763007202 0.826533869 0.899815487 1 11.32274621 -6.253866166 24.99143226 0.790264929 0.991453334 0.456210795 0.095623083 500.9890798 1653251.642 0.029229839 0.036986407 5.57E-07 6.253866166 0.201188405 IEVLPVDTGAGGYS(ph)GNSGSPK ddPTM_A459_MK2206_30min_R2 1 IEVLPVDTGAGGYSGNSGSPK 21 0 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 IEVLPVDTGAGGYS(0.515)GNS(0.083)GS(0.403)PK 164.56 1.52E-08 12104000 50265 49042 52590 41332 37137 28513 52152 34142 38583 54136 TRUE FALSE 54113.32705 46606.64559 54343.32435 37955.04339 35678.81478 29598.0822 45304.37975 38604.47663 41938.8796 52369.54675 1.033297601 0.889957017 1.037689415 0.724754094 0.681289356 0.56517736 0.865090163 0.737155065 0.800825713 1 15.6764405 -5.767015698 24.99431486 0.74881611 0.977278925 0.425070294 0.115207937 116.7495758 523300.5359 0.031497127 0.048235396 1.71E-06 5.767015698 0.228462815 IEVLPVDTGAGGYSGNSGS(ph)PK ddPTM_A459_MK2206_30min_R1 3 IEVLPVDTGAGGYSGNSGSPK 21 0 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 IEVLPVDTGAGGYS(0.004)GNS(0.098)GS(0.899)PK;IEVLPVDTGAGGYSGNSGS(1)PK;IEVLPVDTGAGGYSGNS(0.086)GS(0.914)PK 283.05 3.87E-73 30883600 15019.5 19997.2 18678.3 17772.8 11825.3 11018 13221.5 13664.3 17185.5 17977.9 TRUE FALSE 13742.01265 18695.37865 17410.46904 19141.66414 11354.27326 11641.82964 12339.51786 13544.83447 18971.99422 20205.13798 0.680124663 0.925278445 0.861685234 0.947366168 0.561949801 0.576181645 0.610711883 0.670365849 0.938968803 1 14.30243458 -6.25107702 24.68560159 0.696589663 0.859309081 0.124157204 0.153529437 993.8862892 2367672.033 0.045256006 0.057750244 5.61E-07 6.25107702 0.162719419 IEVLPVDTGAGGYSGNSGS(ph)PK ddPTM_A459_MK2206_30min_R2 1 IEVLPVDTGAGGYSGNSGSPK 21 0 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 IEVLPVDTGAGGYS(0.008)GNS(0.081)GS(0.91)PK 191.73 1.62E-16 9195200 55999 48662 55049 38703 38123 29480 53317 40025 44214 50825 TRUE FALSE 60286.3265 46245.51584 56884.30618 35540.8411 36626.09947 30601.88206 46316.41385 45256.40493 48059.6538 49166.58441 1.226164624 0.940588336 1.156970875 0.722865774 0.744938863 0.622412202 0.942030332 0.920470793 0.977486119 1 15.58539051 -3.514150415 9.683210668 0.911446137 1.081476655 0 0.178948913 89054148.03 0 0.044502834 0 0.00030609 3.514150415 0.170030518 IEVPLYSLLEQTHLK ddPTM_A459_MK2206_30min_R1 1 IEVPLYSLLEQTHLK 15 0 Q92598-2;Q92598;Q92598-3;Q92598-4;A0A0A0MSM0 Q92598-2 HSPH1 Heat shock protein 105 kDa 0 198.81 3.38E-05 1049800 758 832.04 704.32 751.29 802.16 656.7 798.38 842.33 573.26 775.28 FALSE TRUE 693.5281196 777.8740448 656.5127207 809.154486 770.2082686 693.8817865 745.1215269 834.9655976 632.8524284 871.3275395 0.795944221 0.89274585 0.753462609 0.9286456 0.883948038 0.796350115 0.855156635 0.958268343 0.726308305 1 9.767071332 -10.76619842 4.251278907 1.000086729 0.848266657 0.299325002 0.071522576 96896202.4 14.07127944 87347.18861 0.016263351 1.71E-11 10.76619842 -0.151820072 IEWLESHQDADIEDFK ddPTM_A459_MK2206_30min_R1 1 IEWLESHQDADIEDFK 16 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 128.06 0.0013844 16321000 2889.8 2835.3 2683.4 2248 2259.7 2329.2 2355.8 2260.3 2711.5 2826 FALSE TRUE 2644.007335 2650.721455 2501.258284 2421.14135 2169.691364 2461.077291 2198.64888 2240.538435 2993.370128 3176.106215 0.832468172 0.834582119 0.7875235 0.762298609 0.683129347 0.774872477 0.692246648 0.705435613 0.942465373 1 11.63304344 -8.384247664 4.526274397 0.995483495 0.758790419 0.738994623 0.050818306 0.11913744 3.595297508 0.054045844 0.014165193 4.13E-09 8.384247664 -0.236693076 IEWLESHQDADIEDFK ddPTM_A459_MK2206_30min_R2 2 IEWLESHQDADIEDFK 16 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 181.51 1.35E-06 5298500 40533 36864 39829 37059 36206 28539 39014 34622 27059.6 40170 FALSE TRUE 43636.23764 35033.38737 41156.87898 34031.16115 34784.37052 29625.07164 33891.41494 39147.21428 29413.1951 38859.25619 1.122930337 0.901545495 1.059126783 0.875754312 0.895137322 0.762368469 0.872158097 1.007410283 0.75691606 1 15.24597067 -5.772621005 24.80079376 0.876929465 1.015235329 0.339367082 0.093007943 218.304955 484199.5443 0.025115636 0.037649954 1.69E-06 5.772621005 0.138305864 IEYNDQNDGSCDVK ddPTM_A459_MK2206_30min_R2 2 IEYNDQNDGSCDVK 14 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 0 ; 220.4 1.08E-07 15357100 41252 50806 42962 52263 51392 37690 53085 38931 44039 49310 FALSE TRUE 44410.28484 48283.04792 44394.33164 47992.94572 49374.09186 39124.31936 46114.87573 44019.41537 47869.43262 47701.01874 0.931013341 1.012201609 0.9306789 1.006119932 1.035074159 0.820198822 0.966748236 0.922819188 1.003530614 1 15.54173246 IFGGLDMLAEK ddPTM_A459_MK2206_30min_R1 1 IFGGLDMLAEK 11 0 Q92688-2;Q92688 Q92688-2 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 0 151.22 0.0083082 4124000 1647.1 1679.5 1535.6 1648.9 1559.1 1548.6 1771.1 1664.3 1334.4 1552.4 FALSE TRUE 1507.005496 1570.164245 1431.36775 1775.898564 1496.997746 1636.280394 1652.953151 1649.749201 1473.115655 1744.723032 0.86375056 0.899950431 0.820398266 1.01786847 0.858014549 0.937845356 0.947401462 0.945565096 0.844326365 1 10.76878232 -12.49222778 0.012362761 1.984651708 4.75E-07 0.195525613 0.056963816 9852.796399 13.30455581 1214.022706 937.0794669 3.22E-13 12.49222778 -1.984651233 IFGPIWNR ddPTM_A459_MK2206_30min_R1 1 IFGPIWNR 8 0 P11413-3;P11413;P11413-2;E7EUI8;E9PD92;E7EM57 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 160.17 0.0061876 6927800 2351.5 2282.8 2442.2 2095.2 2448.7 2537 2509.1 2116.8 2005.4 2247.7 FALSE TRUE 2151.492577 2134.189305 2276.430268 2256.572667 2351.163094 2680.642748 2341.722517 2098.293041 2213.868506 2526.162045 0.851684309 0.844834681 0.901141822 0.893281043 0.930725366 1.061152333 0.926988243 0.830624878 0.876376284 1 11.30273147 -5.573733082 1.557676369 0.932292102 0.845848482 0.240409161 0.059796573 0.728389363 3.412836775 0.020708229 0.059844887 2.67E-06 5.573733082 -0.08644362 IFGVTTLDIVR ddPTM_A459_MK2206_30min_R1 1 IFGVTTLDIVR 11 0 P40926;G3XAL0 P40926 MDH2 "Malate dehydrogenase, mitochondrial;Malate dehydrogenase" 0 140.83 0.014592 4829600 1730.6 1852.1 1932.3 1947.4 1812.5 1702.5 1920.7 1552.8 1407.8 1443 FALSE TRUE 1583.403382 1731.527953 1801.14086 2097.389085 1740.304287 1798.894079 1792.573608 1539.224033 1554.145848 1621.769734 0.97634291 1.067678054 1.110602092 1.293271814 1.073089632 1.109216704 1.105319436 0.949101467 0.958302412 1 10.66335328 -7.756283936 24.46199794 0.965276437 1.110016187 0.407351151 0.074930831 94.60403292 448894.2037 0.038723546 0.021463331 1.75E-08 7.756283936 0.14473975 IFINNEWHDSVSGK ddPTM_A459_MK2206_30min_R1 2 IFINNEWHDSVSGK 14 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 120.7 0.0028486 36069000 8401.7 4451.9 5478.5 4230.8 15881.3 14556.8 13013 9106.9 4419.1 3976.7 FALSE TRUE 7687.091296 4162.080501 5106.634684 4556.656949 15248.71419 15380.99344 12144.92651 9027.279333 4878.481259 4469.363619 1.71995209 0.931246785 1.142586534 1.01953149 3.41183119 3.441428075 2.717372662 2.019813133 1.091538231 1 12.12585371 -6.232060553 24.64842978 2.411228315 1.179555771 0.294304762 0.801452187 717.3618028 601856.3983 0.249101868 0.321532912 5.86E-07 6.232060553 -1.231672544 IFINNEWHDSVSGK ddPTM_A459_MK2206_30min_R2 1 IFINNEWHDSVSGK 14 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 0 140.31 0.00079176 5725600 31885 44823 40617 75997 67128 93374 65813 47336 61796 39254 FALSE TRUE 34326.14012 42597.155 41971.15051 69787.802 64492.21743 96927.413 57171.67404 53522.97773 67170.90438 37973.14519 0.903958309 1.121770524 1.105285072 1.837819902 1.698363859 2.552525278 1.505581741 1.409495512 1.768905473 1 15.21269188 -5.72749305 7.269351865 1.728549663 1.046379444 0.37431522 0.374788935 0.201123507 32.48937344 0.103135506 0.176336928 1.87E-06 5.72749305 -0.682170219 IFLGADAEEEIGT(ph)PR ddPTM_A459_MK2206_30min_R1 5 IFLGADAEEEIGTPR 15 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 IFLGADAEEEIGT(1)PR;IFLGADAEEEIGT(1)PR;IFLGADAEEEIGT(1)PR;IFLGADAEEEIGT(1)PR;IFLGADAEEEIGT(1)PR 210.08 2.95E-06 28512400 6094.79 7264.27 5809.26 5055.47 6179.11 5742.1 6318.31 5822.5 5948.4 6378.47 TRUE FALSE 5576.396105 6791.364703 5414.943617 5444.843175 5932.982964 6067.21274 5896.827068 5771.594496 6566.757467 7168.683019 0.777882924 0.947365741 0.755361006 0.759531864 0.827625234 0.846349702 0.822581645 0.805112247 0.916034012 1 12.80749239 -8.491585134 2.959731066 0.999373043 0.819483207 0.562773322 0.051975209 0.173960166 3.506392959 0.050046336 0.013391888 3.22E-09 8.491585134 -0.179889836 IFLGADAEEEIGT(ph)PR ddPTM_A459_MK2206_30min_R2 3 IFLGADAEEEIGTPR 15 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 IFLGADAEEEIGT(1)PR;IFLGADAEEEIGT(1)PR;IFLGADAEEEIGT(1)PR 143.64 0.00088067 5309400 11663.6 17229 16039.5 17289.1 18574.1 16660.1 17731.8 13886.1 16333.4 14466 TRUE FALSE 12556.57418 16373.43291 16574.24892 15876.52522 17844.78751 17294.11178 15403.59336 15701.06095 17754.04961 13993.9756 0.89728427 1.170034405 1.18438458 1.134525718 1.275176405 1.235825492 1.100730328 1.12198716 1.268692337 1 13.77251826 -4.761464735 8.363408673 1.172884813 0.894499202 0.505875923 0.079305644 0.069688914 50.43966351 0.01894743 0.109767425 1.73E-05 4.761464735 -0.278385611 IFPGLS(ph)PVR ddPTM_A459_MK2206_30min_R1 1 IFPGLSPVR 9 0 Q5VZK9-2;Q5VZK9;A0A0U1RR91;Q5VZK9-3 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 IFPGLS(1)PVR 102.06 0.016467 5881200 2687.9 2331.1 2509 2229.9 2656.2 2112.5 2827.2 2290.3 1990.3 2044.4 TRUE FALSE 2459.27999 2179.344966 2338.69607 2401.647284 2550.397929 2232.107924 2638.602647 2270.276149 2197.198807 2297.675706 1.070333809 0.948499808 1.017852982 1.045250763 1.10999038 0.971463431 1.148379051 0.988075098 0.9562702 1 11.16595948 -7.973920839 24.99956651 0.976147421 1.041600794 0.206896045 0.05659743 325.615662 312136.0138 0.030450659 0.014627445 1.06E-08 7.973920839 0.065453373 IFSLS(ph)GTLETVR ddPTM_A459_MK2206_30min_R2 2 IFSLSGTLETVR 12 0 B4DEM9;Q9Y2S7 B4DEM9 POLDIP2 Polymerase delta-interacting protein 2 1 IFS(0.001)LS(0.603)GT(0.396)LETVR;IFS(0.021)LS(0.489)GT(0.489)LETVR 133.15 0.0017828 4017200 17425.2 22203.5 19893 20671 22674 21263 19026.8 18073.7 25268 16467.6 TRUE FALSE 18759.28671 21100.90648 20556.22269 18982.11318 21783.70483 22072.17836 16528.5583 20435.99465 27465.76497 15930.26356 1.177587969 1.324579873 1.29038811 1.191575588 1.367441584 1.385550106 1.037557115 1.282840963 1.724124956 1 13.95948252 -11.01846977 5.524628362 0.999508519 1.300731533 0.228450967 0.169777014 0.001017086 9.29E-05 0.16267907 0.039392643 9.58E-12 11.01846977 0.301223014 IFSLSGT(ph)LETVR ddPTM_A459_MK2206_30min_R1 2 IFSLSGTLETVR 12 0 B4DEM9;Q9Y2S7 B4DEM9 POLDIP2 Polymerase delta-interacting protein 2 1 IFSLS(0.031)GT(0.968)LET(0.001)VR;IFSLS(0.039)GT(0.958)LET(0.003)VR 160.18 0.0010086 47804000 3558.1 3087.9 3126.7 3413.2 3270.7 3315.7 3277.1 3126.4 2541.3 2513.7 TRUE FALSE 3255.464911 2886.877149 2914.468315 3676.085255 3140.421093 3503.432069 3058.490638 3099.066214 2805.477229 2825.116133 1.152329588 1.021861408 1.031627791 1.301215625 1.111607787 1.240101965 1.082607048 1.096969494 0.993048461 1 11.46409446 -8.082325652 1.908370391 0.992383062 1.13695164 0.311695247 0.081042728 0.461979682 3.002490452 0.074696778 0.023676351 8.27E-09 8.082325652 0.144568577 IFT(ph)TPLTPSQYYSGSK ddPTM_A459_MK2206_30min_R2 1 IFTTPLTPSQYYSGSK 16 0 P49454 P49454 CENPF Centromere protein F 1 IFT(0.33)T(0.279)PLT(0.275)PS(0.116)QYYSGSK 180.7 2.35E-06 9793900 111070 115630 97410 114680 115030 113010 115300 87401 97389 123230 TRUE FALSE 119573.6046 109887.9823 100657.6008 105310.2772 110513.3442 117310.6747 100160.9715 98824.61079 105859.7192 119209.0152 1.003058405 0.921809329 0.844379099 0.883408667 0.927055257 0.984075529 0.840213061 0.829002829 0.888017731 1 16.86313382 -7.285818056 24.97132741 0.875058648 0.92127325 0.061517559 0.060931709 1840.732049 1885472.327 0.025878268 0.017457963 5.18E-08 7.285818056 0.046214603 IFTSIGEDYDER ddPTM_A459_MK2206_30min_R1 1 IFTSIGEDYDER 12 0 P35232;D6RBK0;C9JZ20;E7ESE2;E9PCW0;C9JW96;P35232-2 P35232 PHB Prohibitin 0 206.49 0.0001424 7907800 1335.6 1361.1 1292.9 1096.5 1309.3 1162.4 1393.5 1110.5 944.09 1016.9 FALSE TRUE 1222.000206 1272.492143 1205.14155 1180.95262 1257.147809 1228.214083 1300.542158 1100.791016 1042.231534 1142.881249 1.069227627 1.11340714 1.054476614 1.033311747 1.09998113 1.074664655 1.137950385 0.963171822 0.911933357 1 10.15845979 -7.83439333 7.654127419 0.951319346 1.08160007 0.734525727 0.034354164 0.119509543 10.72435039 0.018631902 0.008921468 1.46E-08 7.83439333 0.130280724 IFTSIGEDYDER ddPTM_A459_MK2206_30min_R2 5 IFTSIGEDYDER 12 0 P35232;D6RBK0;C9JZ20;E7ESE2;E9PCW0;C9JW96;P35232-2 P35232 PHB Prohibitin 0 ;;;; 215.72 3.75E-06 43446600 71320.2 76950 67476.9 75178.3 80022 89651 79459 67460.3 71369 81948.5 FALSE TRUE 76780.52935 73128.7749 69726.54617 69035.99241 76879.9342 93062.73163 69025.93785 76277.59284 77576.54661 79274.52716 0.968539733 0.922475069 0.87955802 0.870847104 0.969793665 1.173929823 0.870720272 0.962195494 0.978581007 1 16.27456975 -6.508637512 24.61796337 0.996273262 0.910433338 0.234739615 0.074064376 862.2536848 1490528.719 0.024177094 0.026388198 3.10E-07 6.508637512 -0.085839924 IFTTPLT(ph)PSQYYSGSK ddPTM_A459_MK2206_30min_R2 1 IFTTPLTPSQYYSGSK 16 0 P49454 P49454 CENPF Centromere protein F 1 IFT(0.027)T(0.251)PLT(0.341)PS(0.341)QY(0.04)YSGSK 133.9 0.0011624 9169400 55192 53845 45689 65407 56595 53961 64665 54171 40920 64740 TRUE FALSE 59417.54196 51171.1356 47212.24846 60063.03887 54372.79593 56014.52367 56174.40782 61251.3357 44479.14763 62627.5391 0.948744639 0.817070834 0.753857634 0.959051557 0.868193078 0.894407228 0.896960165 0.978025587 0.710217075 1 15.93450957 -5.775278642 24.99885286 0.898256239 0.837608979 0.092219494 0.087451294 554.8256417 1002220.297 0.023631153 0.035254089 1.68E-06 5.775278642 -0.06064726 IFVEESIYDEFVR ddPTM_A459_MK2206_30min_R1 2 IFVEESIYDEFVR 13 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 286.71 3.11E-49 55283590 1560.82 1952.44 1585 1402.77 1539.28 1399.78 1652.1 1383.5 952.827 1234.409 FALSE TRUE 1428.064063 1825.335801 1477.414616 1510.811588 1477.967218 1479.034334 1541.891423 1371.404205 1051.876776 1387.336906 1.029356356 1.31571199 1.064928504 1.089001224 1.065326823 1.066096005 1.111403738 0.988515622 0.758198511 1 10.43810246 -7.956852216 3.843784107 0.875007689 1.10807154 0.494347345 0.092292226 0.16952777 5.22888403 0.05777712 0.024038508 1.10E-08 7.956852216 0.233063851 IFVEESIYDEFVRR ddPTM_A459_MK2206_30min_R1 2 IFVEESIYDEFVRR 14 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 143.55 0.00072665 14591600 4137.7 4838.1 4413.6 4858.5 4842.6 4255.4 4342.9 4983.9 3248.85 2687.56 FALSE TRUE 3785.766887 4523.138811 4114.017129 5232.702512 4649.708988 4496.337071 4053.193065 4940.326288 3586.579584 3020.515223 1.253351368 1.497472609 1.362024961 1.732387399 1.539376115 1.488599374 1.341887978 1.635590594 1.187406558 1 11.56057894 -8.47479742 4.539321405 1.001537636 1.482609514 0.591778486 0.133125458 0.120560134 5.446556977 0.12686129 0.033109331 3.35E-09 8.47479742 0.481071878 IFVGGIKEDTEEYNLR ddPTM_A459_MK2206_30min_R1 1 IFVGGIKEDTEEYNLR 16 1 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 108.23 0.0089622 14275000 2967.4 3112 3513.6 3238.6 3169.1 2513.5 2393.5 2723.3 2522.2 2174.3 FALSE TRUE 2715.007048 2909.408234 3275.106621 3488.037533 3042.868036 2655.812198 2233.833982 2699.490475 2784.391716 2443.668699 1.111037289 1.190590294 1.340241671 1.427377424 1.245204817 1.086813527 0.914131274 1.104687586 1.139430937 1 11.25483299 -6.78144848 4.131047911 1.043152996 1.274494784 0.552995319 0.096724745 0.173828212 6.650602595 0.037596343 0.034600158 1.65E-07 6.78144848 0.231341787 IFVGGLS(ph)PDTPEEK ddPTM_A459_MK2206_30min_R1 1 IFVGGLSPDTPEEK 14 0 D6RAF8;Q14103-3;Q14103;D6RF44;H0YA96;H0Y8G5;Q14103-4;Q14103-2 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IFVGGLS(0.954)PDT(0.046)PEEK 188.09 9.11E-05 3691700 1862.3 1557.8 1734.4 1738.5 1831.3 1970.5 1911.5 1620.3 1444.4 1508.3 TRUE FALSE 1703.901606 1456.386937 1616.67376 1872.399571 1758.355443 2082.068007 1783.987323 1606.133888 1594.550549 1695.159591 1.005157045 0.85914444 0.953700034 1.104556516 1.037280178 1.228243062 1.052400808 0.947482406 0.940649221 1 10.72720539 -5.620292673 6.2465464 1.049506472 0.926097691 0.246817976 0.08405249 0.280180212 15.03304249 0.024592709 0.043019417 2.40E-06 5.620292673 -0.123408781 IFVGGLS(ph)PDTPEEK ddPTM_A459_MK2206_30min_R2 3 IFVGGLSPDTPEEK 14 0 D6RAF8;Q14103-3;Q14103;D6RF44;H0YA96;H0Y8G5;Q14103-4;Q14103-2 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IFVGGLS(0.986)PDT(0.014)PEEK;IFVGGLS(0.981)PDT(0.019)PEEK;IFVGGLS(0.952)PDT(0.048)PEEK 141.46 0.00055408 2435400 39906 44717 44509 45847 41179 35554.8 47889 37668 36224 47468 TRUE FALSE 42961.23404 42496.4188 45992.90785 42101.15344 39562.10555 36907.86283 41601.11677 42591.33693 39374.69804 45919.12305 0.935584811 0.925462334 1.001606842 0.916854475 0.861560564 0.803758007 0.905964967 0.927529406 0.857479312 1 15.48680747 -5.997595998 24.89219537 0.885661096 0.952657144 0.213732143 0.051719288 101.5731596 1051698.574 0.01449233 0.021352978 1.01E-06 5.997595998 0.066996047 IFVGNVSAACTS(ph)QELR ddPTM_A459_MK2206_30min_R1 1 IFVGNVSAACTSQELR 16 0 Q96PK6;A0A0A6YYI9;F8WDX3;A0A0A0MSL8;B8ZZ74;Q96PK6-3;Q96PK6-4;Q96PK6-2;Q96PK6-5 Q96PK6 RBM14;RBM14-RBM4 RNA-binding protein 14 1 IFVGNVSAACT(0.03)S(0.97)QELR 57.53 0.043662 5123300 2834.1 1103.2 1028.2 1413.1 2625.2 4478.7 2523.1 1747.6 846.34 735.76 TRUE FALSE 2593.044913 1031.381479 958.4086487 1521.937207 2520.632725 4732.280124 2354.788603 1732.320917 934.3200717 826.9115035 3.135819131 1.247269478 1.159022029 1.840507963 3.048249679 5.722837454 2.847691189 2.094929034 1.129891249 1 9.691589129 -6.235386783 8.846548159 2.859805986 1.752274412 0.062858529 1.334082779 0.77479272 247.635318 0.420962657 0.536235733 5.82E-07 6.235386783 -1.107531574 IFYPEIEEVQALDDTER ddPTM_A459_MK2206_30min_R1 2 IFYPEIEEVQALDDTER 17 0 P33316-2;A0A0C4DGL3;H0YKC5;P33316;H0YNW5 P33316-2;P33316;H0YNW5 DUT "Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial" 0 ; 204.28 2.69E-07 6769100 1751.38 1909 1937.43 1630.01 1879.58 1596.5 1851.23 1508.02 1340.5 1518.33 FALSE TRUE 1602.415934 1784.723753 1805.92265 1755.553653 1804.712349 1686.89245 1727.737824 1494.83554 1479.849772 1706.432183 0.939044604 1.04588027 1.058303206 1.028786066 1.057593947 0.988549365 1.01248549 0.876000555 0.867218625 1 10.73676736 -7.722625749 7.998637256 0.903787162 1.022228442 0.497178805 0.047603834 0.159892554 28.59011573 0.022270781 0.012637671 1.89E-08 7.722625749 0.11844128 IFYPETTDIYDR ddPTM_A459_MK2206_30min_R2 1 IFYPETTDIYDR 12 0 P46940;A0A0J9YXZ5 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 0 130.94 0.029033 2934700 6185.8 6957.9 6014.8 7117 6635.6 7838 7762.5 6071 4106.1 5863.4 FALSE TRUE 6659.389604 6612.380804 6215.33043 6535.518334 6375.053003 8136.280582 6743.274426 6864.500545 4463.241156 5672.077738 1.174065292 1.165777535 1.095776665 1.152226509 1.123936112 1.434444477 1.188854373 1.21022681 0.786879405 1 12.46966159 -8.25059659 24.68545409 0.893439703 1.193231312 0.593851167 0.099148213 366.7547742 834985.0674 0.070137495 0.025917161 5.62E-09 8.25059659 0.299791608 IFYYFSNSPS(ph)K ddPTM_A459_MK2206_30min_R2 1 IFYYFSNSPSK 11 0 Q08999;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 IFYYFS(0.091)NS(0.132)PS(0.777)K 83.182 0.047922 0 5865 6064.3 4945 6578.7 5561.1 4957.3 6637.2 4662.7 4617.6 5376.3 TRUE FALSE 6314.028909 5763.15568 5109.863832 6041.199166 5342.743272 5145.953525 5765.727667 5272.130899 5019.230501 5200.871771 1.214032798 1.108113396 0.982501407 1.161574334 1.027278408 0.989440569 1.108607926 1.013701381 0.965074842 1 12.34453775 -1.522878745 0.72838687 1.028525945 28.95218554 0.488973356 0.057829906 299.1449391 1.414180351 0.022152375 13665.31785 0.03 1.522878745 27.92365959 IGAEVYHNLK ddPTM_A459_MK2206_30min_R1 2 IGAEVYHNLK 10 0 P06733;A0A2R8Y6G6;P06733-2;K7EM90 P06733 ENO1 Alpha-enolase;Enolase 0 ; 125.68 0.0050363 163481000 17166.3 17414 18314.7 15535.5 17345.6 16102.7 17906.1 17220.5 15099.8 13909 FALSE TRUE 15706.21604 16280.34543 17071.54919 16732.0469 16654.68802 17014.42096 16711.61674 17069.94298 16669.47825 15632.15193 1.004737935 1.041465405 1.092079278 1.070361072 1.065412369 1.088424744 1.06905414 1.091976528 1.06635851 1 13.93222877 -4.945945335 3.357161441 1.071957754 1.005140151 0.367196545 0.025288262 0.230590922 4.933921784 0.005911367 0.032144278 1.13E-05 4.945945335 -0.066817603 IGAEVYHNLK ddPTM_A459_MK2206_30min_R2 1 IGAEVYHNLK 10 0 P06733;A0A2R8Y6G6;P06733-2;K7EM90 P06733 ENO1 Alpha-enolase;Enolase 0 125.68 0.0050363 51013000 178560 215020 196380 236650 208480 219090 232770 173510 193970 197320 FALSE TRUE 192230.6909 204342.4195 202927.2112 217314.938 200294.0277 227427.6235 202207.0194 196188.3527 210841.16 190881.4646 1.007068399 1.070519969 1.0631059 1.138481091 1.049311038 1.191459967 1.059332921 1.027802009 1.104565917 1 17.54231749 -10.21743688 0.7167738 0.990617743 1.081352651 0.172735297 0.051333974 41.16821152 13.47804738 1.02319596 0.018324261 6.06E-11 10.21743688 0.090734908 IGDEYAEDS(ph)SDEEDIR ddPTM_A459_MK2206_30min_R2 1 IGDEYAEDSSDEEDIR 16 0 Q14137;Q14137-2;A0A075B729 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 IGDEYAEDS(0.944)S(0.056)DEEDIR 160.03 0.00014957 0 14956 15963 14245 15899 16473 14739 18360 8885.5 14265 13172 TRUE FALSE 16101.04286 15170.30063 14719.92119 14600.00084 15826.18725 15299.90297 15949.30995 10046.86536 15505.74391 12742.19872 1.263600044 1.19055596 1.155210456 1.14579918 1.242029543 1.200727073 1.251692137 0.788471878 1.216881345 1 13.63732662 -7.721220776 24.9999988 1.002006172 1.203198753 0.457001792 0.102490865 122.2089899 75965.36077 0.044372454 0.025618037 1.90E-08 7.721220776 0.201192581 IGDGLS(ph)PLPHLTESSSFLSTVTSVSR ddPTM_A459_MK2206_30min_R1 2 IGDGLSPLPHLTESSSFLSTVTSVSR 26 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 IGDGLS(1)PLPHLTESSSFLSTVTSVSR;IGDGLS(1)PLPHLTESSSFLSTVTSVSR 82.492 7.91E-05 3565100 1510.46 811.97 1055.08 523.76 1444.19 1517.74 1436.35 1087.93 1023.22 735.14 TRUE FALSE 1381.987445 759.1106054 983.4641092 564.100086 1386.664854 1603.673127 1340.533712 1078.418343 1129.587381 826.2146932 1.672673527 0.918781295 1.190325126 0.682752426 1.678334779 1.94098839 1.622500451 1.305251954 1.367183844 1 9.690372907 -6.28878875 24.84656744 1.530575966 1.107335833 0.222843397 0.33166518 925.3317323 840649.852 0.103526146 0.117415408 5.14E-07 6.28878875 -0.423240133 IGEEQS(ph)AEDAEDGPPELLFIHGGHTAK ddPTM_A459_MK2206_30min_R2 1 IGEEQSAEDAEDGPPELLFIHGGHTAK 27 0 E9PC52;Q16576;Q16576-2;Q5JNZ6 E9PC52 RBBP7 Histone-binding protein RBBP7 1 IGEEQS(1)AEDAEDGPPELLFIHGGHTAK 88.927 2.02E-05 2620400 12163 16376 15296 24487 20077 28010 18089 15712 17909 11845 TRUE FALSE 13094.20863 15562.79165 15805.96101 22486.33377 19288.6761 29075.94018 15713.89257 17765.61235 19466.69245 11458.49862 1.142750815 1.35818768 1.379409426 1.962415367 1.683351086 2.537499994 1.371374479 1.550431076 1.698886834 1 13.4841304 -3.734537125 11.8890617 1.608210816 1.437120764 0 0.419972909 0 0 0.097450598 0 0.000184273 3.734537125 -0.171090052 IGEGTY(ph)GVVYK ddPTM_A459_MK2206_30min_R1 6 IGEGTYGVVYK 11 0 A0A087WZZ9;P06493;E5RIU6;A0A024QZP7;P06493-2;G3V317;K7ELV5;E7ESI2;P24941-2;G3V5T9;P24941;Q00526 A0A087WZZ9;G3V5T9 CDK1;CDC2;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 IGEGT(0.013)Y(0.987)GVVYK;IGEGT(0.215)Y(0.784)GVVYK;IGEGT(0.149)Y(0.851)GVVYK;IGEGT(0.092)Y(0.908)GVVYK;IGEGT(0.097)Y(0.903)GVVYK;IGEGT(0.248)Y(0.752)GVVYK 172.59 0.0033373 3564742000 22412.4 23074.1 25051.7 18663.4 20675.1 17705.1 20698.7 21625.2 19216.4 17014.9 TRUE FALSE 20506.10769 21571.9719 23351.2604 20100.8583 19851.56699 18707.54746 19317.92749 21436.13316 21214.01355 19122.83427 1.072336213 1.128073987 1.221119217 1.051144303 1.038107987 0.978283198 1.010202108 1.120970503 1.109355091 1 14.22300875 -5.900605117 11.0704269 1.044071761 1.139190544 0.40383022 0.053791192 0.425049039 44.23412642 0.016320098 0.024223042 1.26E-06 5.900605117 0.095118783 IGEGTY(ph)GVVYK ddPTM_A459_MK2206_30min_R2 7 IGEGTYGVVYK 11 0 A0A087WZZ9;P06493;E5RIU6;A0A024QZP7;P06493-2;G3V317;K7ELV5;E7ESI2;P24941-2;G3V5T9;P24941;Q00526 A0A087WZZ9;G3V5T9 CDK1;CDC2;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 IGEGT(0.189)Y(0.804)GVVY(0.007)K;IGEGT(0.013)Y(0.987)GVVYK;IGEGT(0.108)Y(0.892)GVVYK;IGEGT(0.009)Y(0.991)GVVYK;IGEGT(0.102)Y(0.898)GVVYK;IGEGT(0.267)Y(0.733)GVVYK;IGEGT(0.095)Y(0.905)GVVYK 157.34 0.0078168 2818885900 331872 382126 374620 379279 389042 317358 421175 274983 308107 346343 TRUE FALSE 357280.3755 363150.1785 387109.6438 348290.6924 373766.2563 329435.2811 365874.2166 310924.2223 334905.5899 335041.8563 1.066375346 1.083894957 1.155406814 1.039543824 1.115580783 0.983266045 1.092025398 0.928016057 0.999593286 1 18.35398181 -7.115469448 0.995945878 0.98022947 1.0952784 0.437936664 0.049131109 0.476646555 0.951326024 0.032008136 0.020707663 7.67E-08 7.115469448 0.115048929 IGEGTYGVVYK ddPTM_A459_MK2206_30min_R1 2 IGEGTYGVVYK 11 0 A0A087WZZ9;P06493;E5RIU6;A0A024QZP7;P06493-2;G3V317;K7ELV5;E7ESI2;P24941-2;G3V5T9;P24941;Q00526 A0A087WZZ9;G3V5T9 CDK1;CDC2;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 0 ; 186.78 0.00026603 51960000 5756.3 6253.8 6212.9 5485.1 5050.7 4805.9 5964.2 5612 5119.6 4982 FALSE TRUE 5266.696457 5846.676483 5791.185658 5907.563352 4849.519924 5078.005905 5566.3391 5562.934876 5651.800741 5599.207772 0.940614578 1.044197094 1.034286616 1.055071287 0.866108228 0.906915069 0.994129764 0.993521781 1.00939293 1 12.451007 IGEGTYGVVYK ddPTM_A459_MK2206_30min_R2 1 IGEGTYGVVYK 11 0 A0A087WZZ9;P06493;E5RIU6;A0A024QZP7;P06493-2;G3V317;K7ELV5;E7ESI2;P24941-2;G3V5T9;P24941;Q00526 A0A087WZZ9;G3V5T9 CDK1;CDC2;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 0 127.76 0.040236 6692200 19023 26465 22900 22804 19092 13953 29382 16991 24794 23112 FALSE TRUE 20479.41551 25150.78658 23663.47457 20940.84025 18342.35215 14483.99119 25524.10811 19211.78204 26950.5373 22357.85733 0.915982923 1.124919361 1.058396349 0.93662107 0.820398479 0.647825549 1.141616915 0.859285474 1.205416821 1 14.44849431 -10.55239495 13.48020775 1 0.962366244 0.002549066 0.161052864 0 0 0.158285799 0.038389945 2.80E-11 10.55239495 -0.037633756 IGEHMEEHGIK ddPTM_A459_MK2206_30min_R1 4 IGEHMEEHGIK 11 0 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;Q16881-7;E2QRB9 Q16881 TXNRD1 "Thioredoxin reductase 1, cytoplasmic" 0 ;;; 125.74 0.0018571 34761300 22469.2 26125.9 28339.7 23509.7 23787.3 20689.8 25670.9 24673.4 23219.1 20919.8 FALSE TRUE 20558.07655 24425.09916 26416.08012 25320.42117 22839.80147 21861.2386 23958.4411 24457.68307 25632.80854 23511.50276 0.874383775 1.038857423 1.123538567 1.076937592 0.97143095 0.929810349 1.019009348 1.040243293 1.090224168 1 14.52107913 -4.759974926 24.94652301 1.03222267 0.874383577 0.434302162 0.054043827 39.62719909 674798.8104 0.015022892 0.091931874 1.74E-05 4.759974926 -0.157839093 IGEHMEEHGIK ddPTM_A459_MK2206_30min_R2 2 IGEHMEEHGIK 11 0 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;Q16881-7;E2QRB9 Q16881 TXNRD1 "Thioredoxin reductase 1, cytoplasmic" 0 ; 119.22 0.0028663 35464000 226690 282220 272410 272640 275010 238580 302220 248460 244720 274200 FALSE TRUE 244045.5607 268205.3652 281492.0134 250364.4399 264211.7256 247659.3291 262538.151 280934.5751 266005.3032 265252.8765 0.920048687 1.011130845 1.061221342 0.943870782 0.996074874 0.933672548 0.989765519 1.059119806 1.00283664 1 18.01700887 -7.546818675 23.57377942 1.023475536 0.980574713 0.174603907 0.041395388 217.1365818 213810.5844 0.019686569 0.011367134 2.84E-08 7.546818675 -0.042900824 IGEHTPS(ph)ALAIMENANVLAR ddPTM_A459_MK2206_30min_R2 1 IGEHTPSALAIMENANVLAR 20 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BR04;H3BU78 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 IGEHT(0.097)PS(0.903)ALAIMENANVLAR 51.611 0.042805 2018200 6290.7 6835.7 6411.2 7218.9 7925.4 6738.2 11247 6930.3 4536.7 7139.9 TRUE FALSE 6772.320829 6496.249078 6624.946208 6629.092778 7614.208974 6994.626923 9770.25539 7836.114005 4931.293966 6906.925648 0.980511616 0.940541336 0.959174392 0.959774741 1.102402047 1.012697585 1.414559225 1.134529949 0.713963667 1 12.75382798 -6.255580861 22.25525961 1.084812215 0.95855153 0.079397973 0.161939842 247.7931506 941304.1931 0.050040927 0.06265003 5.55E-07 6.255580861 -0.126260685 IGEHTPSALAIMENANVLAR ddPTM_A459_MK2206_30min_R1 3 IGEHTPSALAIMENANVLAR 20 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BR04;H3BU78 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ;; 178.52 4.83E-13 73023000 8847.5 8521.6 8403.2 8663.3 9619 8307.8 9201.6 9597.9 7969.5 7475.1 FALSE TRUE 8094.973665 7966.842291 7832.814197 9330.548867 9235.854861 8778.180457 8587.778053 9513.986572 8797.958044 8401.171822 0.963552923 0.948301316 0.932347816 1.110624692 1.099353168 1.04487572 1.022211929 1.132459468 1.047229866 1 13.03637486 -5.754084676 24.99971323 1.069548536 0.948090718 0.653745904 0.038993529 97.8042737 332447.5738 0.010535668 0.017788706 1.76E-06 5.754084676 -0.121457818 IGEHTPSALAIMENANVLAR ddPTM_A459_MK2206_30min_R2 1 IGEHTPSALAIMENANVLAR 20 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BR04;H3BU78 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 191.4 2.14E-15 3037900 9490.3 13138 11816 9158.3 8795.3 10428 11308 9894.3 7649.9 10440 FALSE TRUE 10216.88466 12485.58602 12209.93954 8410.037594 8449.952329 10824.84485 9823.246017 11187.51898 8315.274474 10099.34365 1.01163848 1.236276975 1.208983471 0.832731104 0.836683315 1.071836469 0.972661824 1.107747133 0.823348007 1 13.30197392 -5.74831473 24.9997643 0.955164672 1.160697421 0.426277933 0.1076457 224.4105347 427452.4181 0.029693622 0.051031964 1.79E-06 5.74831473 0.205532748 IGELGAPEVWGLS(ph)PK ddPTM_A459_MK2206_30min_R1 3 IGELGAPEVWGLSPK 15 0 Q8N5F7;A0A494C050 Q8N5F7 NKAP NF-kappa-B-activating protein 1 IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK 165.45 8.62E-05 736439400 22404.7 32193.4 31079.3 24137.5 17870 15985.7 20457.1 20786.9 27019.1 25121.7 TRUE FALSE 20499.06261 30097.60381 28969.72371 25996.57443 17158.20006 16890.79652 19092.44419 20605.16232 29827.83213 28233.96586 0.726042623 1.066006949 1.026059317 0.920755326 0.607714841 0.598243853 0.676222543 0.729800497 1.056452086 1 14.78514417 -6.090945924 7.782264759 0.750858721 0.955529652 0.163802174 0.165869297 0.424066308 32.35623191 0.049699423 0.064412961 8.11E-07 6.090945924 0.204670931 IGELGAPEVWGLS(ph)PK ddPTM_A459_MK2206_30min_R2 2 IGELGAPEVWGLSPK 15 0 Q8N5F7;A0A494C050 Q8N5F7 NKAP NF-kappa-B-activating protein 1 IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK 116.96 0.002197 206602000 91498 92288 97294 79641 85042 54409 99019 70281 61411 104784 TRUE FALSE 98503.15723 87705.11212 100537.7334 73134.07554 81702.82378 56479.57262 86017.68636 79466.96801 66752.41777 101364.9067 0.971767848 0.865241384 0.991839649 0.721493049 0.806026725 0.557190595 0.848594343 0.783969232 0.658535779 1 16.62919874 -5.765906896 24.9952566 0.755133739 0.935178814 0.324268622 0.114542913 118.7953336 664651.8399 0.030339215 0.046785479 1.71E-06 5.765906896 0.180045074 IGEVSS(ph)PK ddPTM_A459_MK2206_30min_R1 1 IGEVSSPK 8 0 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 IGEVS(0.054)S(0.946)PK 82.831 0.040368 7863500 7268.4 8518.9 6992.6 6078.9 4067.8 3973.3 4485.8 3796 7131.4 5898.2 TRUE FALSE 6650.184412 7964.318062 6517.961794 6547.097931 3905.770912 4198.264812 4186.560467 3762.811972 7872.73455 6628.913545 1.003208801 1.201451491 0.983262453 0.987657764 0.589202271 0.633326228 0.631560578 0.567636302 1.187635726 1 12.69455672 -6.091690839 4.670176159 0.733724417 1.064867388 0.321856559 0.193912683 0.236597281 8.723590295 0.057337177 0.07606171 8.10E-07 6.091690839 0.331142971 IGFPS(ph)TSPAK ddPTM_A459_MK2206_30min_R1 1 IGFPSTSPAK 10 0 Q9UDT6-2;Q9UDT6 Q9UDT6-2 CLIP2 CAP-Gly domain-containing linker protein 2 1 IGFPS(0.333)T(0.333)S(0.333)PAK 121.61 0.0047238 58227000 8899.4 8626.2 9112.7 7401.1 7389.7 6209.3 7343.8 7844.6 7777.6 7027.7 TRUE FALSE 8142.459297 8064.632812 8494.155313 7971.134004 7095.352601 6560.8652 6853.908502 7776.015489 8586.109352 7898.344532 1.03090708 1.021053561 1.075434894 1.009215788 0.898334147 0.830663334 0.867765197 0.984512065 1.087077085 1 12.94733459 -6.084921711 5.074968573 0.934906503 1.040786187 0.286158018 0.069512104 0.290047453 12.63756059 0.022791114 0.030101194 8.22E-07 6.084921711 0.105879685 IGFPS(ph)TSPAK ddPTM_A459_MK2206_30min_R2 1 IGFPSTSPAK 10 0 Q9UDT6-2;Q9UDT6 Q9UDT6-2 CLIP2 CAP-Gly domain-containing linker protein 2 1 IGFPS(0.795)T(0.204)S(0.001)PAK 133.42 0.002274 60360000 208380 207470 230200 208780 220550 172050 238700 183190 170250 241710 TRUE FALSE 224333.733 197167.3415 237874.7531 191722.0061 211890.0988 178597.4833 207358.4033 207133.562 185058.0373 233823.0225 0.959416787 0.843233226 1.017328194 0.819944949 0.906198614 0.763814792 0.886817735 0.885856148 0.791444894 1 17.83505746 -5.789898495 24.99509379 0.858538285 0.930316986 0.170848831 0.074022827 348.019246 305657.3571 0.019485966 0.028908663 1.62E-06 5.789898495 0.071778701 IGFPS(ph)TTPAK ddPTM_A459_MK2206_30min_R2 1 IGFPSTTPAK 10 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H0N7 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 IGFPS(0.466)T(0.466)T(0.069)PAK 104.43 0.013157 26462000 375350 382770 333810 372080 403900 305970 409400 279280 255920 350720 TRUE FALSE 404087.0846 363762.1984 344939.0588 341679.8738 388040.8566 317613.9028 355645.2882 315782.8549 278179.459 339276.0351 1.19102749 1.072171803 1.016691493 1.0070852 1.143731995 0.936151894 1.048247596 0.930754967 0.819920744 1 18.3721 -7.294191324 0.983063675 0.908487581 1.079317085 0.426509719 0.077068078 0.551670683 1.028679103 0.057740387 0.032127902 5.08E-08 7.294191324 0.170829504 IGFPSTS(ph)PAK ddPTM_A459_MK2206_30min_R1 1 IGFPSTSPAK 10 0 Q9UDT6-2;Q9UDT6 Q9UDT6-2 CLIP2 CAP-Gly domain-containing linker protein 2 1 IGFPS(0.083)T(0.28)S(0.637)PAK 91.701 0.027661 72122000 7357.2 6975.7 6750.6 6034.2 5735.1 4768 5501.2 5906 5901.3 5315.2 TRUE FALSE 6731.431506 6521.580662 6292.38808 6498.95513 5506.658823 5037.96004 5134.224986 5854.364465 6514.761253 5973.687104 1.126847019 1.09171782 1.053350798 1.087930288 0.921819092 0.843358541 0.85947337 0.980025295 1.090576245 1 12.54440596 -6.257552844 24.31623444 0.938430739 1.087471897 0.49933054 0.068520772 204.7864199 1281251.614 0.022466709 0.027899962 5.53E-07 6.257552844 0.149041159 IGFPSTS(ph)PAK ddPTM_A459_MK2206_30min_R2 1 IGFPSTSPAK 10 0 Q9UDT6-2;Q9UDT6 Q9UDT6-2 CLIP2 CAP-Gly domain-containing linker protein 2 1 IGFPS(0.175)T(0.122)S(0.703)PAK 103.21 0.014461 64137000 269620 248000 238950 236340 238970 176560 299000 195170 185830 232830 TRUE FALSE 290262.3145 235684.6806 246916.4737 217030.266 229586.8371 183279.1145 259740.9408 220679.3891 201993.1575 225232.7762 1.28872147 1.0464049 1.09627239 0.963582076 1.019331382 0.813731987 1.153211115 0.979783639 0.896819552 1 17.78105726 -1.522878768 0.803172978 0.977685139 78.35322416 0.522339255 0.087163821 406.2780558 1.392516969 0.030377881 57215.36504 0.029999998 1.522878768 77.37553902 IGFPWSEIR ddPTM_A459_MK2206_30min_R1 2 IGFPWSEIR 9 0 P15311;E7EQR4;P26038;A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3;P35241-4 P15311;P26038;A0A2R8Y5S7 EZR;MSN;RDX Ezrin;Moesin;Radixin 0 ; 186.09 0.0078587 17694100 5435.9 5895.2 5375.5 6079 6194.9 5333.3 5414.9 5064.6 4349.8 4940.9 FALSE TRUE 4973.54816 5511.421408 5010.626037 6547.205633 5948.144015 5635.266837 5053.681901 5020.320736 4801.977276 5553.015994 0.895648088 0.992509551 0.902325159 1.179035976 1.071155571 1.014811923 0.910078758 0.904071002 0.864751206 1 12.43905584 -7.26107966 23.55158153 0.911731149 1.014158418 0.218117676 0.082166706 21.62547338 1415992.412 0.034459789 0.025033471 5.48E-08 7.26107966 0.102427269 IGGDAGTS(ph)LNSNDYGYGGQK ddPTM_A459_MK2206_30min_R1 1 IGGDAGTSLNSNDYGYGGQK 20 0 Q96AE4;E9PEB5;Q96AE4-2;C9JSZ1 Q96AE4 FUBP1 Far upstream element-binding protein 1 1 IGGDAGT(0.019)S(0.981)LNSNDYGYGGQK 150.91 1.13E-06 0 682.74 415.36 611.73 433.85 671.01 555.11 471.1 555.07 372.27 439.55 TRUE FALSE 624.6693778 388.3199885 570.207472 467.2652022 644.2822508 586.5398485 439.6737786 550.2170815 410.9687987 494.0047724 1.264500694 0.786065257 1.154254987 0.945871838 1.304202483 1.187316158 0.890019294 1.113789 0.831912608 1 8.948381169 -7.264905488 24.96930173 0.968412646 1.096228582 0.171640187 0.15778179 649.1336192 4676222.069 0.063229719 0.044592475 5.43E-08 7.264905488 0.127815936 IGGIGTVPVGR ddPTM_A459_MK2206_30min_R1 2 IGGIGTVPVGR 11 0 P68104;A0A087WVQ9;Q5VTE0;A0A2U3TZH3;Q05639 P68104 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 0 ; 146.69 0.0094137 54738000 3567.4 3298.7 3170.5 3546.8 4009.9 3575 3335.3 3405.3 3139.6 3407.5 FALSE TRUE 3263.973897 3083.95403 2955.295294 3819.975151 3850.177192 3777.413411 3112.808223 3375.527821 3465.972655 3829.646825 0.852291098 0.805284187 0.77168873 0.997474526 1.005360903 0.986360775 0.812818613 0.881420135 0.905037152 1 11.90299564 -5.75463784 24.99307286 0.935474033 0.809307609 0.489183529 0.061361919 156.6165097 575499.2188 0.018635814 0.031375607 1.76E-06 5.75463784 -0.126166424 IGHHS(ph)TSDDSSAYR ddPTM_A459_MK2206_30min_R1 2 IGHHSTSDDSSAYR 14 0 F5H5P2;P12694;P12694-2;F5GXU9 F5H5P2 BCKDHA "2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial" 1 IGHHS(0.617)T(0.321)S(0.051)DDS(0.003)S(0.008)AYR;IGHHS(0.851)T(0.126)S(0.02)DDS(0.001)S(0.002)AYR 106.6 0.0036196 44571000 6427.5 4083.1 4523.7 3773.2 7584.1 8537.3 7740.8 5655.1 3379.7 5006.1 TRUE FALSE 5880.807373 3817.289448 4216.643848 4063.812518 7282.009237 9020.674548 7224.425356 5605.658057 3731.031909 5626.293462 1.045236515 0.678473221 0.749453237 0.722289469 1.294281801 1.603306797 1.28404702 0.996332327 0.663142073 1 12.45796909 -6.256002781 24.9759761 1.170350813 0.786734542 0.307384148 0.248271228 559.4118333 2569960.879 0.081172048 0.101713377 5.55E-07 6.256002781 -0.383616271 IGHHS(ph)TSDDSSAYR ddPTM_A459_MK2206_30min_R2 3 IGHHSTSDDSSAYR 14 0 F5H5P2;P12694;P12694-2;F5GXU9 F5H5P2 BCKDHA "2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial" 1 IGHHS(0.838)T(0.138)S(0.024)DDSSAYR;IGHHS(0.752)T(0.19)S(0.04)DDS(0.005)S(0.014)AYR;IGHHS(0.892)T(0.095)S(0.014)DDSSAYR 128.74 0.00073405 34657800 40960 67340 52492 89552 62408 96245 68452 47539 82070 54635 TRUE FALSE 44095.92909 63995.99352 54242.05708 82235.31514 59957.54834 99907.67092 59464.17017 53752.51053 89208.30025 52852.26442 0.834324311 1.210846767 1.026295802 1.555946865 1.134436698 1.890319592 1.125101655 1.017033255 1.687880382 1 15.68967766 -4.441909596 0.976753682 1.339566049 0.286412389 0.196470539 0.292590002 5.672700682 2.770304787 0.093202309 7.364329002 3.61E-05 4.441909596 -1.05315366 IGHHSTS(ph)DDSSAYR ddPTM_A459_MK2206_30min_R1 1 IGHHSTSDDSSAYR 14 0 F5H5P2;P12694;P12694-2;F5GXU9 F5H5P2 BCKDHA "2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial" 1 IGHHS(0.24)T(0.24)S(0.392)DDS(0.027)S(0.101)AYR 70.451 0.038091 1291200 1277 1610.4 1255.1 1167 1075 1350.4 1228.8 1551 857.73 1280.9 TRUE FALSE 1168.384444 1505.562667 1169.907309 1256.882542 1032.180474 1426.858481 1146.828994 1537.439771 946.8941029 1439.587562 0.811610544 1.045829171 0.812668392 0.873085164 0.716997354 0.991157828 0.796637193 1.067972391 0.65775374 1 10.49143983 IGITNHDEYSLVR ddPTM_A459_MK2206_30min_R2 1 IGITNHDEYSLVR 13 0 Q9Y490 Q9Y490 TLN1 Talin-1 0 92.781 0.025281 1269600 9717.3 11919 11079 10649 9246.3 10688 13513 11403 9242.1 11362 FALSE TRUE 10461.26396 11327.11979 11448.36833 9778.942636 8883.243803 11094.73933 11738.72687 12893.41125 10045.96115 10991.25887 0.951780327 1.030557093 1.041588454 0.889701785 0.808209861 1.009414796 1.068005677 1.173060466 0.9139955 1 13.42406901 -6.993062046 24.9873147 1.051119009 0.947249229 0.207275879 0.086645925 265.3055952 955502.5274 0.032214195 0.028343375 1.02E-07 6.993062046 -0.103869781 IGNTS(ph)PLTTLPESSAFAK ddPTM_A459_MK2206_30min_R1 1 IGNTSPLTTLPESSAFAK 18 0 P0CG40 P0CG40 SP9 Transcription factor Sp9 1 IGNT(0.1)S(0.817)PLT(0.06)T(0.022)LPESSAFAK 85.046 0.0077825 5871500 1439.3 1462.7 1452.5 1209.8 1571.6 1294.9 1190.4 1286.1 1323.9 1398.9 TRUE FALSE 1316.879977 1367.477964 1353.908347 1302.979006 1508.999844 1368.216119 1110.990588 1274.855763 1461.524143 1572.206293 0.837599991 0.869782782 0.861151843 0.828758294 0.959797611 0.870252285 0.706644283 0.810870538 0.929600746 1 10.61857481 -8.496839779 4.121170205 0.999447339 0.844857768 0.423754451 0.059511893 0.188627609 8.202341554 0.062111399 0.016266247 3.19E-09 8.496839779 -0.154589571 IGNTS(ph)PLTTLPESSAFAK ddPTM_A459_MK2206_30min_R2 1 IGNTSPLTTLPESSAFAK 18 0 P0CG40 P0CG40 SP9 Transcription factor Sp9 1 IGNT(0.066)S(0.933)PLT(0.001)TLPESSAFAK 96.143 0.0038299 8759800 41470 59741 44546 56467 48798 43513 51940 39135 45591 47876 TRUE FALSE 44644.97509 56774.34881 46031.14141 51853.46547 46881.94533 45168.91771 45120.21561 44250.07887 49556.42277 46313.81004 0.963966796 1.225862194 0.993896666 1.119611309 1.012267082 0.975279677 0.97422811 0.955440264 1.070013949 1 15.49915483 -6.423059209 5.38787335 0.991138919 1.080299597 0.220096295 0.072030821 0.308695608 13.39156567 0.021231561 0.023992525 3.78E-07 6.423059209 0.089160678 IGNTSPLT(ph)TLPESSAFAK ddPTM_A459_MK2206_30min_R2 1 IGNTSPLTTLPESSAFAK 18 0 P0CG40 P0CG40 SP9 Transcription factor Sp9 1 IGNT(0.11)S(0.34)PLT(0.454)T(0.096)LPESSAFAK 110.92 0.0031413 5165900 43131 46029 43287 47055 34450 40530 40255 41395 32508 41142 TRUE FALSE 46433.14252 43743.26679 44730.16698 43210.45598 33097.3199 42072.39755 34969.47015 46805.46863 35335.48708 39799.53991 1.166675359 1.099089761 1.123886534 1.085702399 0.831600566 1.057107636 0.87864006 1.176030395 0.887836572 1 15.28046413 -6.019326257 23.68344522 0.978305746 1.123136188 0.375819645 0.093749773 412.1545066 505077.476 0.025958081 0.034103281 9.56E-07 6.019326257 0.144830442 IGPALSCGNT(ph)VVVKPAEQTPLTALHVASLIK ddPTM_A459_MK2206_30min_R1 1 IGPALSCGNTVVVKPAEQTPLTALHVASLIK 31 1 P00352;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 1 IGPALS(0.282)CGNT(0.718)VVVKPAEQTPLTALHVASLIK 94.031 6.30E-08 2410300 791.85 734.9 709.38 602.41 853.41 737.8 1044.1 856.39 588.47 607.64 TRUE FALSE 724.4989993 687.0578764 661.229262 648.8077226 819.4168726 779.5735984 974.4499941 848.9026725 649.6435624 682.9190306 1.060885649 1.006060522 0.968239619 0.950050729 1.199874122 1.141531519 1.4268895 1.243050251 0.951274651 1 9.415570727 -6.267058095 24.65202715 1.184966578 0.995000691 0.276086461 0.126504392 456.9235794 2004743.138 0.039722981 0.04632437 5.41E-07 6.267058095 -0.189965887 IGPALSCGNTVVVKPAEQTPLTALHVASLIK ddPTM_A459_MK2206_30min_R1 2 IGPALSCGNTVVVKPAEQTPLTALHVASLIK 31 1 P00352;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 106.38 3.72E-11 21852000 2840.06 2803.89 2099.73 2163.35 3106.03 2563.48 3452.2 2792.96 2072.98 2014.43 FALSE TRUE 2598.497983 2621.356251 1957.206178 2329.971592 2982.310248 2708.622022 3221.910037 2768.541445 2288.473689 2263.992797 1.147750111 1.157846551 0.864493112 1.02914267 1.317279036 1.196391626 1.423109668 1.222857886 1.01081315 1 11.14465365 -6.242114577 23.91662372 1.217685664 1.044288325 0.192605616 0.141044983 688.9096672 852602.1775 0.042510165 0.054776111 5.73E-07 6.242114577 -0.173397339 IGPLGLS(ph)PK ddPTM_A459_MK2206_30min_R1 2 IGPLGLSPK 9 0 P30050 P30050 RPL12 60S ribosomal protein L12 1 IGPLGLS(1)PK;IGPLGLS(1)PK 96.756 0.0212 267100000 14883.2 17950.8 17542.3 15759.1 10489.6 9520.9 11757.4 12505.6 15030.2 12987.6 TRUE FALSE 13617.30569 16782.19966 16351.57755 16972.86861 10071.77702 10059.96513 10973.0853 12396.26486 16592.64308 14596.60194 0.932909299 1.149733323 1.120231792 1.162795881 0.690008336 0.689199114 0.751756151 0.849256896 1.136746973 1 13.83334493 -6.25106445 24.9521662 0.832055727 1.097641153 0.397431766 0.14247003 682.9723731 1642578.243 0.044057337 0.056243377 5.61E-07 6.25106445 0.265585425 IGPLGLS(ph)PK ddPTM_A459_MK2206_30min_R2 1 IGPLGLSPK 9 0 P30050 P30050 RPL12 60S ribosomal protein L12 1 IGPLGLS(1)PK 80.916 0.045196 85564000 83398 87957 84962 64364 85514 51012 91504 75797 64453 88683 TRUE FALSE 89783.015 83589.18328 87794.59068 59105.25531 82156.29069 52953.29741 79489.41488 85703.92815 70059.00544 85789.28097 1.046552833 0.974354632 1.023374828 0.688958511 0.957652165 0.617248412 0.926565813 0.999005088 0.816640548 1 16.38850978 -5.679825195 24.99999658 0.854931113 1.010723253 0.261014612 0.120730503 39.76495545 12177.4233 0.032069146 0.05554538 2.09E-06 5.679825195 0.15579214 IGPPAVEAAVT(ph)PPAPPQPTPR ddPTM_A459_MK2206_30min_R2 1 IGPPAVEAAVTPPAPPQPTPR 21 0 A0A1B0GVH1;Q9BRW5;Q02086-2;Q02086 A0A1B0GVH1 SP2 Transcription factor Sp2 1 IGPPAVEAAVT(1)PPAPPQPTPR 91.065 0.0058335 0 990.19 4589 3390.3 5386 5434 8998.9 6056.7 5100.6 5941.3 3491.6 TRUE FALSE 1065.999708 4361.116933 3503.33091 4945.946571 5220.633856 9341.359445 5261.448015 5767.265933 6458.063535 3377.669378 0.315602147 1.291161581 1.037203621 1.464307491 1.545631994 2.765622801 1.557715521 1.707469053 1.911988064 1 11.7218124 -4.992033525 0.808363934 1.807863977 9.51E-07 0.452327667 0.451101724 1.772451494 1.096304172 0.176740618 2.720441599 1.02E-05 4.992033525 -1.807863026 IGQQVDREPGDVAT(ph)PPR ddPTM_A459_MK2206_30min_R1 3 IGQQVDREPGDVATPPR 17 1 H3BT22;Q9Y5N6 H3BT22 ORC6 Origin recognition complex subunit 6 1 IGQQVDREPGDVAT(1)PPR;IGQQVDREPGDVAT(1)PPR;IGQQVDREPGDVAT(1)PPR 189.04 7.26E-07 51016200 5053.7 4769.9 4521.9 4064.68 5001.9 4162.67 4952.9 4589.43 3800.34 3358.39 TRUE FALSE 4623.856277 4459.378643 4214.966027 4377.742358 4802.663731 4398.356778 4622.501078 4549.305097 4195.398943 3774.452708 1.225040194 1.181463642 1.11670919 1.159835 1.272413275 1.165296566 1.224681149 1.205288674 1.111525105 1 11.88205175 -8.561931281 2.928598133 1.000364594 1.19216816 0.689345073 0.040586998 0.162375735 3.546629478 0.04083015 0.010905193 2.74E-09 8.561931281 0.191803565 IGRPMVAS(ph)PNQR ddPTM_A459_MK2206_30min_R1 1 IGRPMVASPNQR 12 1 Q8IWZ3-6;H7C0V5 Q8IWZ3-6 ANKHD1;ANKHD1-EIF4EBP3 Ankyrin repeat and KH domain-containing protein 1 1 IGRPMVAS(1)PNQR 110.98 0.03319 9073100 2006.7 2051.9 2647.9 1874.9 2136.4 1874.4 2413.6 2396 1673.3 1700.5 TRUE FALSE 1836.019627 1918.320937 2468.167925 2019.305123 2051.302664 1980.526908 2252.593148 2375.052025 1847.245523 1911.170778 0.960677951 1.003741245 1.291442897 1.056580158 1.073322535 1.036289865 1.178645662 1.242720981 0.966551783 1 10.90024098 -7.240873191 24.16988437 1.117206383 1.076875044 0 0.110871182 2545.616573 2991676.348 0.043120218 0.03334811 5.74E-08 7.240873191 -0.040331338 IGRPMVAS(ph)PNQR ddPTM_A459_MK2206_30min_R2 1 IGRPMVASPNQR 12 1 Q8IWZ3-6;H7C0V5 Q8IWZ3-6 ANKHD1;ANKHD1-EIF4EBP3 Ankyrin repeat and KH domain-containing protein 1 1 IGRPMVAS(1)PNQR 64.842 0.044054 10613000 15264 14799 12761 12276 18711 15943 19230 12942 12133 14133 TRUE FALSE 16432.62358 14064.10318 13186.44537 11273.01153 17976.31212 16549.72204 16705.0779 14633.56384 13188.30641 13671.84137 1.201931995 1.02869122 0.964496663 0.8245423 1.314842064 1.210496932 1.221860132 1.070343302 0.964632785 1 13.73891994 -4.747553442 24.06968154 1.075196806 1.2019325 0.075949057 0.138706022 1477.422994 2560702.185 0.037456405 0.711823178 1.79E-05 4.747553442 0.126735694 IGS(ph)DPLAYEPK ddPTM_A459_MK2206_30min_R2 2 IGSDPLAYEPK 11 0 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 IGS(1)DPLAYEPK;IGS(1)DPLAYEPK 109.84 0.0091624 5071700 150848 56189 84061 51753 43798 34930 92027 46568 44339 65620 TRUE FALSE 162397.0389 53398.73597 86863.55178 47524.61435 42078.27045 36259.28563 79943.74436 52654.59749 48195.52607 63478.82477 2.55828679 0.841205491 1.368386263 0.748668781 0.662870975 0.57120285 1.259376566 0.829482866 0.759237844 1 15.9539878 -3.175447772 1.533465471 0.865570169 200 0.787688641 0.255234088 72.88695788 1.884419992 0.071143448 49705.12728 0.000667655 3.175447772 199.1344298 up IGS(ph)MTGAEQALLPR ddPTM_A459_MK2206_30min_R2 2 IGSMTGAEQALLPR 14 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 IGS(0.997)MT(0.003)GAEQALLPR;IGS(0.823)MT(0.177)GAEQALLPR 104.21 0.006348 2919200 11056.1 6496.9 8030.6 8468.6 6828.8 7440 7860 5099 7751.7 8617.5 TRUE FALSE 11902.56352 6174.273393 8298.336196 7776.68829 6560.667 7723.134413 6827.972558 5765.456807 8425.928854 8336.311681 1.427797325 0.740648098 0.99544457 0.932869186 0.786998765 0.926445017 0.819063972 0.691607635 1.010750219 1 13.0251935 -4.753172242 24.99967758 0.870747232 1.427798353 0.697789966 0.108406533 165.5454749 500567.8667 0.025845033 0.28605228 1.77E-05 4.753172242 0.557051122 IGTLHTS(ph)PDLK ddPTM_A459_MK2206_30min_R2 1 IGTLHTSPDLK 11 0 Q9UPZ3;Q9UPZ3-2 Q9UPZ3 HPS5 Hermansky-Pudlak syndrome 5 protein 1 IGTLHT(0.146)S(0.853)PDLK 78.287 0.031663 12213000 134150 156830 132900 137500 132490 116760 175430 110720 121920 162920 TRUE FALSE 144420.6271 149042.0503 137330.8197 126265.8102 127287.7769 121203.3836 152395.8303 125191.4842 132524.3812 157603.9337 0.916351665 0.945674684 0.8713667 0.801159001 0.8076434 0.769037807 0.966954483 0.794342382 0.840869755 1 17.26594402 -5.413948779 4.453713105 0.844356826 0.929912195 0.140586571 0.071540446 0.357747399 11.48174688 0.018319435 0.039778996 3.86E-06 5.413948779 0.085555369 IGVAKPLPLS(ph)PEEGYVSAK ddPTM_A459_MK2206_30min_R2 1 IGVAKPLPLSPEEGYVSAK 19 1 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 IGVAKPLPLS(0.96)PEEGY(0.036)VS(0.005)AK 61.957 0.018527 2859300 9591.5 12051 9277.5 11402 11150 8274.5 10141 8368.7 8443.6 9006.1 TRUE FALSE 10325.83261 11452.56486 9586.80722 10470.42013 10712.19498 8589.391896 8809.474518 9462.517824 9178.009065 8712.231695 1.185210974 1.314538601 1.100384787 1.201806896 1.229558092 0.985900306 1.011161643 1.086118707 1.053462464 1 13.08882661 -6.756949781 24.99996886 1.031700599 1.206179372 0.721329931 0.055586825 64.02790406 356534.1613 0.018945721 0.018337381 1.75E-07 6.756949781 0.174478773 IHAESLLLDS(ph)PAVAK ddPTM_A459_MK2206_30min_R2 1 IHAESLLLDSPAVAK 15 0 Q9H4L5;Q9H4L5-5;Q9H4L5-2;Q9H4L5-6 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 IHAESLLLDS(1)PAVAK 119.23 0.0012779 2366600 32070 38539 38585 46581 37818 40494 40087 29842 33378 40952 TRUE FALSE 34525.30386 36625.2093 39871.40464 42775.18329 36333.0753 42035.02755 34823.52875 33742.45186 36281.15811 39615.73959 0.871504715 0.924511562 1.006453623 1.079752233 0.917137372 1.061068857 0.879032655 0.85174358 0.915826853 1 15.27378612 -7.300126945 24.98898205 0.899296055 0.977688222 0.162980906 0.070037379 879.5560092 568117.3246 0.029707889 0.020029493 5.01E-08 7.300126945 0.078392167 IHDENLR ddPTM_A459_MK2206_30min_R1 2 IHDENLR 7 0 O95232;J3KPP4;D6RDI2 O95232 LUC7L3 Luc7-like protein 3 0 ; 206.51 9.81E-06 8705000 1878.57 1626.08 1831.74 1558.47 1475.79 1333.31 1628.41 1521.93 351.21 1275.34 FALSE TRUE 1718.787757 1520.221896 1707.406592 1678.503629 1417.006159 1408.80086 1519.78174 1508.623926 387.7195363 1433.338748 1.199149719 1.060615921 1.191209402 1.17104462 0.988605214 0.982880608 1.060308837 1.052524345 0.27050098 1 10.48516389 -8.118590526 9.067744545 0.636670456 1.088150045 0.508556441 0.178465071 0.242438185 17.17249562 0.111707788 0.042077159 7.61E-09 8.118590526 0.451479589 IHDENLR ddPTM_A459_MK2206_30min_R2 2 IHDENLR 7 0 O95232;J3KPP4;D6RDI2 O95232 LUC7L3 Luc7-like protein 3 0 ; 177.71 1.74E-06 9606900 11004.3 11103.8 9497.4 11440.2 10307.8 7051.4 13598.4 9999.4 6710.6 7440.4 FALSE TRUE 11846.79767 10552.40144 9814.038576 10505.49906 9903.063979 7319.745968 11812.91375 11306.35591 7294.275858 7197.620357 1.645932556 1.466095864 1.363511562 1.459579492 1.375880289 1.016967498 1.641224899 1.570846384 1.013428813 1 12.81330429 -13.2292986 0.09582995 1.55E-10 1.722137918 0.352680015 0.196072984 185.9518256 1.609875338 41.74928049 4.322262605 5.90E-14 13.2292986 1.722137918 IHEDIFDIIDR ddPTM_A459_MK2206_30min_R2 1 IHEDIFDIIDR 11 0 K7EKE5;K7EIS0;Q9NRH3;P23258 K7EKE5 TUBG1;TUBG2 Tubulin gamma chain;Tubulin gamma-2 chain;Tubulin gamma-1 chain 0 119.74 0.0069288 827840 5860.9 6916.7 6751.1 5312.5 7903.6 6692.2 6495.9 4676.7 7080.8 7678 FALSE TRUE 6309.61501 6573.226736 6976.178304 4878.451756 7593.264952 6946.87636 5642.980527 5287.960748 7696.675185 7427.467489 0.849497493 0.884988961 0.939240504 0.656812267 1.022322206 0.935295425 0.759744898 0.71194667 1.036244884 1 12.85865467 -8.292183049 24.83261168 1.018122562 0.849264974 0.300543188 0.105492636 944.7804673 763119.3631 0.102750529 0.026542469 5.10E-09 8.292183049 -0.168857588 IHEGCEEPATHNALAK ddPTM_A459_MK2206_30min_R2 1 IHEGCEEPATHNALAK 16 0 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 130.19 0.00045553 7715500 54847 79429 61352 63602 66801 58324 68537 57167 55437 62587 FALSE TRUE 59046.12849 75484.67136 63397.44506 58405.51315 64178.05709 60543.56069 59538.00957 64638.92318 60258.81005 60544.79132 0.97524704 1.246757479 1.047116419 0.96466619 1.060009552 0.999979674 0.983371291 1.067621537 0.995276534 1 15.88571523 -5.509730636 24.97517555 1.01290534 1.119985938 0.255385221 0.067879829 683.5478695 1298415.629 0.016542727 0.032106412 3.09E-06 5.509730636 0.107080598 IHEKDPNSATATAPPS(ph)PLKR ddPTM_A459_MK2206_30min_R2 1 IHEKDPNSATATAPPSPLKR 20 2 Q92766;Q92766-2;Q92766-5;Q92766-3;C9JU34;Q92766-6 Q92766 RREB1 Ras-responsive element-binding protein 1 1 IHEKDPNSATATAPPS(1)PLKR 86.617 0.00087858 6003400 19452 25290 18234 19373 21283 16029 31599 23686 13848 23316 TRUE FALSE 20941.26008 24034.13538 18841.91246 17790.16393 20447.32248 16638.99483 27450.01334 26781.84153 15052.47401 22555.20083 0.928444851 1.065569558 0.835368862 0.788738884 0.906545796 0.737701027 1.217014805 1.187390958 0.66736156 1 14.46117251 -7.252021176 24.83228532 1.03355775 0.881060466 0.151564033 0.161446049 1150.333703 3033005.368 0.063059065 0.048198267 5.60E-08 7.252021176 -0.152497284 IHFPLATYAPVISAEK ddPTM_A459_MK2206_30min_R1 2 IHFPLATYAPVISAEK 16 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;P68363;P68363-2;C9JDS9;P68366-2;P68366 Q9BQE3;P68363;P68366-2 TUBA1C;TUBA1B;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ; 136.81 0.00057447 43991000 14589.4 13796.9 14714.2 13295.7 13845 12597.5 14314.8 13349.9 12286.7 11410.4 FALSE TRUE 13348.49492 12898.7193 13715.4411 14319.73712 13293.52433 13310.75956 13359.88581 13233.18323 13563.94643 12824.0065 1.040898952 1.005826011 1.069512956 1.116635205 1.036612414 1.037956396 1.041787199 1.03190709 1.057699592 1 13.64655944 -9.766332856 8.685823469 1 1.048727786 0.219247758 0.027603803 0 0 0.028655711 0.006950031 1.71E-10 9.766332856 0.048727786 IHFPLATYAPVISAEK ddPTM_A459_MK2206_30min_R2 3 IHFPLATYAPVISAEK 16 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;P68363;P68363-2;C9JDS9;P68366-2;P68366 Q9BQE3;P68363;P68366-2 TUBA1C;TUBA1B;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ;; 106.3 0.004942 11306600 81732 90919 83587 96986 97392 89096 100874 78681 80555 92596 FALSE TRUE 87989.46476 86404.09467 86373.74886 89061.93356 93567.90072 92486.61071 87629.12263 88964.87685 87561.52829 89574.6001 0.982303741 0.964604861 0.964266084 0.994276653 1.044580725 1.032509334 0.978280925 0.993193123 0.97752631 1 16.45080208 -5.8933174 5.104854089 1.005339669 0.970126442 0.352735904 0.020471079 0.248216899 10.19707386 0.006496199 0.009821552 1.28E-06 5.8933174 -0.035213227 IHFS(ph)PSEPK ddPTM_A459_MK2206_30min_R2 2 IHFSPSEPK 9 0 Q8IZT6-2;Q8IZT6 Q8IZT6-2 ASPM Abnormal spindle-like microcephaly-associated protein 1 IHFS(0.999)PS(0.001)EPK;IHFS(0.946)PS(0.054)EPK 124.67 0.0034637 5367700 94101 85223 81157 87883 85428 69998 96186 61855 68079 100369 TRUE FALSE 101305.4449 80990.94975 83862.73387 80702.67778 82073.66748 72661.82294 83556.66266 69939.66088 74000.38836 97093.96775 1.043375271 0.83415017 0.86372754 0.831181171 0.845301406 0.748365986 0.86057522 0.72032962 0.762152275 1 16.56709405 -2.033764579 1.182925632 0.813815256 199.9999993 0.408030731 0.075257109 1168.44528 2.510111876 0.020949776 630492.1823 0.009251996 2.033764579 199.1861841 IHGVGFK ddPTM_A459_MK2206_30min_R2 1 IHGVGFK 7 0 P62899-3;H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899;P62899-2;B8ZZK4 P62899-3 RPL31 60S ribosomal protein L31 0 109.7 0.0221 5688700 95551 114370 95585 115900 110680 100960 118250 89964 93788 117200 FALSE TRUE 102866.458 108690.5521 98771.75619 106430.5993 106334.1471 104802.1035 102723.633 101722.6037 101945.5107 113375.7736 0.907305457 0.958675285 0.871189259 0.938741989 0.937891259 0.924378288 0.906045707 0.897216402 0.899182493 1 16.79075287 IHIDLPNEQAR ddPTM_A459_MK2206_30min_R2 2 IHIDLPNEQAR 11 0 P62333;A0A087X2I1 P62333 PSMC6 26S protease regulatory subunit 10B 0 ; 129 0.0037494 4365800 19966.4 22361 19120.6 25717 20531.6 20708.6 22066.2 18831.3 15460.3 19825.9 FALSE TRUE 21495.04294 21250.58526 19758.07126 23615.83884 19725.42622 21496.68028 19168.88143 21292.61557 16805.00895 19178.98251 1.120760339 1.108014215 1.030193925 1.231339505 1.028491799 1.120845711 0.999473326 1.110205693 0.876220047 1 14.22723856 -7.80322797 1.100064057 0.958137412 1.106865803 0.371959599 0.072819304 0.538942975 1.177715287 0.059736293 0.02319544 1.57E-08 7.80322797 0.148728391 IHLDEK ddPTM_A459_MK2206_30min_R1 1 IHLDEK 6 0 P37837 P37837 TALDO1 Transaldolase 0 100.27 0.045076 1894000 3320.2 3485.5 2903 2991.6 2356.2 1893.8 2945.9 3537.5 487.35 2757.5 FALSE TRUE 3037.799555 3258.593316 2705.952448 3222.01355 2262.347565 2001.025319 2749.384386 3506.57201 538.0117765 3099.119918 0.98021362 1.05145764 0.873135767 1.039654365 0.729996781 0.645675344 0.887150049 1.131473484 0.173601471 1 11.59764286 -6.264493426 24.66309103 0.768399508 0.982712688 0.170140128 0.242871462 429.0851366 3465092.388 0.071731181 0.084890004 5.44E-07 6.264493426 0.214313181 IHLDEK ddPTM_A459_MK2206_30min_R2 2 IHLDEK 6 0 P37837 P37837 TALDO1 Transaldolase 0 ; 127.66 0.019185 19663100 207927 246508 226673 251777 235581 191678 263610 207687 188283 247580 FALSE TRUE 223846.051 234266.7712 234230.1647 231206.0137 226330.9062 198972.4406 228997.6903 234832.404 204659.515 239501.4849 0.934633249 0.978143293 0.977990449 0.965363592 0.945008363 0.830777482 0.956143092 0.980505002 0.854522948 1 17.86967507 -6.526327746 24.99472908 0.921015537 0.9646811 0.121709598 0.049837101 205.2569401 1487468.805 0.016151149 0.01622358 2.98E-07 6.526327746 0.043665563 IHLGS(ph)SPK ddPTM_A459_MK2206_30min_R1 1 IHLGSSPK 8 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 IHLGS(0.611)S(0.389)PK 128.27 0.0043716 69639000 9498.3 10698 11783 10573 8314.7 7208.6 8457.3 8449.3 7898.7 7984.3 TRUE FALSE 8690.419707 10001.55826 10983.20279 11387.33429 7983.507892 7616.744702 7893.128948 8375.428661 8719.798131 8973.455362 0.968458565 1.114571573 1.223965835 1.269002166 0.88968046 0.848808446 0.879608649 0.933356029 0.971732491 1 13.13144791 -6.277095311 24.94316973 0.911566553 1.147609416 0.626586149 0.084325043 520.4725121 829219.4888 0.027902238 0.031746358 5.28E-07 6.277095311 0.236042863 IHLGSS(ph)PK ddPTM_A459_MK2206_30min_R1 1 IHLGSSPK 8 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 IHLGS(0.187)S(0.813)PK 80.755 0.030018 54870000 9441.1 9263.9 10532 8762.3 8013 6892.1 8718.7 8735.6 8008.8 7742.5 TRUE FALSE 8638.084868 8660.818426 9817.117184 9437.173864 7693.825242 7282.324746 8137.091431 8659.22557 8841.34342 8701.699353 0.992689418 0.995301961 1.128183908 1.084520791 0.884175025 0.836885354 0.935115212 0.995118909 1.016047908 1 13.08708146 -6.254738518 24.98819628 0.938457334 1.051826724 0.39953024 0.063154203 584.309174 2178946.524 0.020973207 0.026445266 5.56E-07 6.254738518 0.11336939 IHLGSS(ph)PK ddPTM_A459_MK2206_30min_R2 4 IHLGSSPK 8 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 IHLGS(0.004)S(0.996)PK;IHLGS(0.182)S(0.818)PK;IHLGS(0.036)S(0.964)PK;IHLGS(0.184)S(0.816)PK 135.43 0.0026584 169812000 810510 968430 879940 926440 964190 663040 1099280 815720 735660 1026170 TRUE FALSE 872563.2688 920339.1744 909276.7604 850746.8885 926331.0559 688272.4518 954943.2155 922337.4048 799646.377 992686.1569 0.878992079 0.927119984 0.915976066 0.857014961 0.933156013 0.693343457 0.961978979 0.929132937 0.805537955 1 19.92097815 -10.7544547 6.341299931 1.000001607 0.880131756 0.191409388 0.07509604 1.67E-06 2.02E-07 0.070998702 0.017219484 1.76E-11 10.7544547 -0.119869851 IHLPALS(ph)PR ddPTM_A459_MK2206_30min_R1 2 IHLPALSPR 9 0 Q8NEA6-2;F8WEV9;Q1PHJ8 Q8NEA6-2 GLIS3 Zinc finger protein GLIS3 1 IHLPALS(1)PR;IHLPALS(1)PR 95.618 0.014695 10981400 6727.8 7109 6985.5 5966.8 7031.3 6383.5 6922.3 6597.1 5739.4 5618.2 TRUE FALSE 6155.565281 6646.202808 6511.343723 6426.36397 6751.228432 6744.928253 6460.525997 6539.42225 6336.031169 6314.225031 0.974872649 1.052576171 1.031218192 1.017759731 1.069209349 1.068211573 1.023170059 1.035665061 1.003453494 1 12.62438996 -1.547515341 21.71609261 1.03128386 0.005174129 0 0.029083896 0 0 0.006553805 0 0.028345535 1.547515341 -1.026109731 IHLPALS(ph)PR ddPTM_A459_MK2206_30min_R2 3 IHLPALSPR 9 0 Q8NEA6-2;F8WEV9;Q1PHJ8 Q8NEA6-2 GLIS3 Zinc finger protein GLIS3 1 IHLPALS(1)PR;IHLPALS(1)PR;IHLPALS(1)PR 96.756 0.014024 8066200 54905 63541 45108.8 65742 58994 65540 68736 49937.3 47050.4 68344 TRUE FALSE 59108.56901 60385.64634 46612.70488 60370.6683 56677.59914 68034.17063 59710.88063 56464.27657 51142.75874 66113.94088 0.894040927 0.913357237 0.705035946 0.913130688 0.857271528 1.029044249 0.903151133 0.854044939 0.773554837 1 16.01266689 IHNVGS(ph)PLK ddPTM_A459_MK2206_30min_R2 5 IHNVGSPLK 9 0 P52701-2;P52701;P52701-3;A0A087WWJ1;A0A494C0M1;P52701-4 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 IHNVGS(1)PLK;IHNVGS(1)PLK;IHNVGS(1)PLK;IHNVGS(1)PLK;IHNVGS(1)PLK 99.752 0.017296 46361300 470680 549978 500369 537734 568011 445737 637356 442299 407341 596107 TRUE FALSE 506715.6227 522666.8923 517051.0527 493799.4121 545708.0341 462699.8339 553670.3916 500108.9979 442770.7839 576656.0774 0.878713747 0.906375416 0.896636787 0.856315283 0.946331887 0.802384388 0.960139697 0.867256962 0.767824707 1 19.13735161 -7.973771819 24.99552665 0.861788355 0.892004709 0 0.06725742 784.2932674 747433.3236 0.033986152 0.016325836 1.06E-08 7.973771819 0.030216354 IHPMAYQLQLQAAS(ph)NFKSPVK ddPTM_A459_MK2206_30min_R2 5 IHPMAYQLQLQAASNFKSPVK 21 1 Q5SRQ6;P67870 Q5SRQ6 CSNK2B Casein kinase II subunit beta 1 IHPMAYQLQLQAAS(0.5)NFKS(0.5)PVK;IHPMAYQLQLQAAS(0.5)NFKS(0.5)PVK;IHPMAYQLQLQAAS(0.579)NFKS(0.421)PVK;IHPMAYQLQLQAAS(0.5)NFKS(0.5)PVK;IHPMAYQLQLQAAS(0.57)NFKS(0.43)PVK 80.361 0.00085601 66408000 245132 301048 275388 221644 331516 238686 347804 240805 277008 326901 TRUE FALSE 263899.4944 286098.3941 284569.2985 203534.9762 318499.0161 247769.363 302136.917 272279.0403 301101.6551 316234.2471 0.834506372 0.904704018 0.899868692 0.643620917 1.007161682 0.783499464 0.955421242 0.86100428 0.952147523 1 18.27063409 -8.284838696 0.640012044 1.000522225 0.845832662 0.216486598 0.092799047 1.16483567 1.111471154 0.088514928 0.039483144 5.19E-09 8.284838696 -0.154689563 IHPMAYQLQLQAASNFKS(ph)PVK ddPTM_A459_MK2206_30min_R1 3 IHPMAYQLQLQAASNFKSPVK 21 1 Q5SRQ6;P67870 Q5SRQ6 CSNK2B Casein kinase II subunit beta 1 IHPMAYQLQLQAAS(0.062)NFKS(0.938)PVK;IHPMAYQLQLQAAS(0.114)NFKS(0.886)PVK;IHPMAY(0.001)QLQLQAAS(0.017)NFKS(0.982)PVK 86.825 0.00055042 157874000 14607.6 15703.4 15832.5 14427.9 12898.6 9752 12276.7 14341.6 11998.8 10197.4 TRUE FALSE 13365.14691 14681.10581 14757.83401 15539.13936 12384.82145 10304.14981 11457.74374 14216.2129 13246.1182 11460.7309 1.16616881 1.280992106 1.287686985 1.355859368 1.080631031 0.89908313 0.999739357 1.240428122 1.155783023 1 13.48441143 -6.323427045 7.698136017 1.06262484 1.274124987 0.53061482 0.096818278 0.266490421 29.95279704 0.033237973 0.037771099 4.75E-07 6.323427045 0.211500146 IHPMAYQLQLQAASNFKS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 IHPMAYQLQLQAASNFKSPVK 21 1 Q5SRQ6;P67870 Q5SRQ6 CSNK2B Casein kinase II subunit beta 1 IHPMAYQLQLQAAS(0.408)NFKS(0.592)PVK;IHPMAYQLQLQAAS(0.417)NFKS(0.583)PVK 71.601 0.002255 42962400 77664 101237 88056 77139 103142 72538 105645 74309 80574 98149 TRUE FALSE 83610.01555 96209.71779 90991.74309 70836.49694 99092.12683 75298.48442 91773.6846 84021.44144 87582.18088 94946.40617 0.880602215 1.013305523 0.95834847 0.746068227 1.043663798 0.793063028 0.966584079 0.884935458 0.922438083 1 16.53482577 -8.569603244 18.75039811 1.000000002 0.912128722 0.084849543 0.087250211 2309.416786 926764.4498 0.079281705 0.020470448 2.69E-09 8.569603244 -0.08787128 IHQDSES(ph)GDELSSSSTEQIR ddPTM_A459_MK2206_30min_R1 2 IHQDSESGDELSSSSTEQIR 20 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 IHQDS(0.001)ES(0.999)GDELSSSSTEQIR;IHQDS(0.394)ES(0.606)GDELSSSSTEQIR 285.96 8.35E-73 31355000 1700.88 909.3 1218.5 827.38 1308.56 1445.78 1949.87 1534.83 1214.86 1356.6 TRUE FALSE 1556.211224 850.1044047 1135.791615 891.104951 1256.437284 1527.638814 1819.79773 1521.411143 1341.149044 1524.66585 1.020690025 0.557567683 0.744944615 0.584459179 0.824073868 1.001949912 1.193571516 0.997865298 0.879634737 1 10.57427738 -6.656060538 3.483294502 1.027226699 0.715011302 0.495548785 0.137347452 0.188167058 4.451099581 0.04706714 0.04646915 2.21E-07 6.656060538 -0.312215398 IHQDSES(ph)GDELSSSSTEQIR ddPTM_A459_MK2206_30min_R2 4 IHQDSESGDELSSSSTEQIR 20 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 IHQDS(0.058)ES(0.942)GDELSSSSTEQIR;IHQDSES(1)GDELSSSSTEQIR;IHQDS(0.019)ES(0.547)GDELS(0.394)S(0.037)S(0.002)S(0.001)TEQIR;IHQDS(0.006)ES(0.994)GDELSSSSTEQIR 158.12 8.86E-07 124315000 69752 100430 75899 135238 112940 130112 115010 102757 97629 121720 TRUE FALSE 75092.26675 95442.79224 78429.43478 124188.6228 108505.4081 135063.5033 99909.04885 116187.6927 106120.5939 117748.2864 0.637735538 0.810566295 0.66607708 1.054695797 0.921503076 1.147052815 0.84849684 0.986746358 0.901249583 1 16.84534654 -5.757868769 24.99996228 0.978459695 0.715370259 0.669326198 0.088534378 53.3703906 373670.588 0.023161937 0.038168747 1.75E-06 5.757868769 -0.263089436 IHRAS(ph)DPGLPAEEPK ddPTM_A459_MK2206_30min_R1 5 IHRASDPGLPAEEPK 15 1 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK 119.37 0.0010539 535904000 33397.9 38791 37702 33252.3 30486.6 28062.3 34637.1 34785.2 40542.4 37100.2 TRUE FALSE 30557.23323 36265.69885 35142.89328 35813.39791 29272.25417 29651.16318 32326.52226 34481.07666 44756.92756 41696.45287 0.732849706 0.869755012 0.842826928 0.858907544 0.702032239 0.711119559 0.775282309 0.826954676 1.073398922 1 15.34763704 -8.18565164 4.661478894 1.036470536 0.788256887 0.739970299 0.058765258 0.112545038 4.409968804 0.047838378 0.016528592 6.52E-09 8.18565164 -0.248213649 IHRAS(ph)DPGLPAEEPK ddPTM_A459_MK2206_30min_R2 6 IHRASDPGLPAEEPK 15 1 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK 147.64 0.00017606 772731000 1399093 1738540 1623400 1637880 1808660 1608169 2391100 1476128 1586424 2215210 TRUE FALSE 1506208.636 1652206.632 1677523.346 1504059.965 1737642.921 1669368.998 2077145.698 1669062.998 1724408.292 2142927.879 0.702874161 0.77100431 0.782818387 0.701871481 0.810873262 0.77901315 0.969302662 0.778870355 0.804697306 1 21.03115187 -6.859766949 2.105583858 0.868883242 0.748538626 0.429142335 0.071223482 0.346800207 3.14781935 0.02863181 0.024655063 1.38E-07 6.859766949 -0.120344616 IHRAS(ph)DPGLPAEEPKEK ddPTM_A459_MK2206_30min_R1 1 IHRASDPGLPAEEPKEK 17 2 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 IHRAS(1)DPGLPAEEPKEK 59.345 0.02505 14316000 9313.8 10375 11882 14306 11523 8478.7 8436.9 14259 6137.4 3185.3 TRUE FALSE 8521.612401 9699.585614 11075.48295 15407.8506 11064.01451 8958.756667 7874.089795 14134.33507 6775.404693 3579.919012 2.38039251 2.709442751 3.093780309 4.303966248 3.090576763 2.502502609 2.199516182 3.948227605 1.892613959 1 11.80571123 -8.506782254 6.366559981 1.000670698 3.016845594 0.525730546 0.630070296 0.109436519 20.8447188 0.634201667 0.164255238 3.11E-09 8.506782254 2.016174896 IHRAS(ph)DPGLPAEEPKEK ddPTM_A459_MK2206_30min_R2 4 IHRASDPGLPAEEPKEK 17 2 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK 59.728 0.024493 59531000 116008 479755 287375 331808 649622 398264 520008 256091 624469 334049 TRUE FALSE 124889.6617 455931.0643 296955.9391 304698.225 624114.5762 413420.2156 451730.325 289562.973 678784.1848 323149.0085 0.386477007 1.410900397 0.918944299 0.942903172 1.931352286 1.27934855 1.397901009 0.896066413 2.100529994 1 18.30184004 -4.573259732 0.848128164 1.378732123 1.76E-17 0.273613293 0.414744598 4.788139336 2.102896231 0.145039824 6.708654226 2.67E-05 4.573259732 -1.378732123 IHS(ph)PIIR ddPTM_A459_MK2206_30min_R1 2 IHSPIIR 7 0 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 IHS(1)PIIR;IHS(1)PIIR 88.37 0.02141 19984800 3572 3175.28 3705.8 3078.38 3310.46 2883.28 3098.26 3215.6 3070.57 2608.38 TRUE FALSE 3268.182643 2968.568695 3454.260621 3315.477361 3178.597368 3046.528822 2891.580728 3187.486348 3389.76674 2931.525807 1.114840141 1.012636044 1.178314928 1.130973281 1.084280875 1.039229747 0.986373963 1.087313078 1.156314821 1 11.51743604 -6.54431765 5.694854013 1.055449083 1.107398046 0.167071768 0.058245452 0.358733616 36.67224293 0.020055054 0.020564868 2.86E-07 6.54431765 0.051948963 IHS(ph)PIIR ddPTM_A459_MK2206_30min_R2 5 IHSPIIR 7 0 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 IHS(1)PIIR;IHS(1)PIIR;IHS(1)PIIR;IHS(1)PIIR;IHS(1)PIIR 88.37 0.02141 104524000 31700.8 28489.7 34415.9 40411.1 28593.2 35161.2 34564.4 35474.6 27335.3 40491.1 TRUE FALSE 34127.83762 27074.94293 35563.30893 37109.38386 27470.4873 36499.2841 30026.05276 40111.25202 29712.87498 39169.87872 0.871277592 0.691218452 0.907924918 0.947395935 0.701316629 0.931820197 0.766559758 1.024033092 0.758564385 1 15.25745704 -14.5228787 0.146570968 1.537029415 0.796807001 0.155705324 0.106529712 242.8120454 2.129101659 38.04178365 0.54542308 3.00E-15 14.5228787 -0.740222413 IHS(ph)PIPDMSK ddPTM_A459_MK2206_30min_R1 1 IHSPIPDMSK 10 0 Q6NZY4;Q6NZY4-2 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 IHS(1)PIPDMSK 71.558 0.046795 6841600 8569.3 10021 8936.8 7898.8 7312.5 6752.8 7036.8 7466.2 7463.2 7201.9 TRUE FALSE 7840.436036 9368.631079 8330.194915 8507.166945 7021.227641 7135.1377 6567.387911 7400.923801 8239.026347 8094.125744 0.968657553 1.157460531 1.029165494 1.051029749 0.867447315 0.881520491 0.811377055 0.914357404 1.017901946 1 12.98265955 -6.250590754 23.25614332 0.904253381 1.057540466 0.458833118 0.07170405 233.5584994 500676.3542 0.021287082 0.027162113 5.62E-07 6.250590754 0.153287085 IHSQEEALR ddPTM_A459_MK2206_30min_R2 2 IHSQEEALR 9 0 F2Z2Y4;O00764-3;O00764-2;O00764 F2Z2Y4 PDXK Pyridoxal kinase 0 ; 128.86 0.0059334 9123900 19765.4 24677 18957.5 26987 23590 20470 25197 19785 17263.9 18463.3 FALSE TRUE 21278.65422 23451.57606 19589.53359 24782.07577 22663.73807 21249.00019 21888.60363 22370.96743 18765.48282 17860.84403 1.191357709 1.313016116 1.096786555 1.38750866 1.268906331 1.189697427 1.225507798 1.252514573 1.050649274 1 14.12451264 -8.33623994 3.773139154 1.004051566 1.242452549 0.580578232 0.073604907 0.156111019 4.039688005 0.066884643 0.018037579 4.61E-09 8.33623994 0.238400983 IHTDFEK ddPTM_A459_MK2206_30min_R2 2 IHTDFEK 7 0 J3KQ32;Q9NTK5;Q9NTK5-2 J3KQ32 OLA1 Obg-like ATPase 1 0 ; 120.62 0.013051 8653300 98438 130505 116231 130173 129261 119455 133858 107252 113928 125655 FALSE TRUE 105974.489 124024.3115 120106.0835 119537.4495 124185.5637 124000.9437 116282.2838 121270.2047 123837.2515 121554.8876 0.871824169 1.020315299 0.988081071 0.983403069 1.021641878 1.020123058 0.956623679 0.997657988 1.018776406 1 16.89124838 -4.75575842 24.999848 0.999606193 0.871823965 0.790961567 0.019873848 83.23646052 366256.1509 0.005037574 0.043330694 1.75E-05 4.75575842 -0.127782228 IHVIDHSGAR ddPTM_A459_MK2206_30min_R1 1 IHVIDHSGAR 10 0 K7EK42;A0A494C0X0;Q99426;K7EP07;Q99426-2 K7EK42 TBCB Tubulin-folding cofactor B 0 114.86 0.0095932 5355500 2524.5 2357.3 2813 2572.1 2714.3 2265.3 3111.5 2312.1 2064.4 2317.8 FALSE TRUE 2309.778018 2203.839342 2622.061397 2770.203588 2606.183683 2393.559328 2903.937512 2291.885553 2279.001768 2604.946562 0.886689213 0.846020941 1.006570129 1.063439699 1.000474912 0.918851604 1.114778151 0.879820564 0.874874671 1 11.34703806 -5.260798221 24.99987347 0.984064077 0.866355069 0.291431769 0.072308444 70.35180647 2742980 0.019350506 0.045304344 5.49E-06 5.260798221 -0.117709008 IIAPPERK ddPTM_A459_MK2206_30min_R1 1 IIAPPERK 8 1 P60709;P63267-2;A0A2R8YFE2;P63261;P68133;P68032;P63267;P62736;A6NL76;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2" 0 96.492 0.02846 30234000 5080.4 5104.9 5135.2 5372.3 5617.6 4913.6 4900.5 5342.6 3219.4 2742.7 FALSE TRUE 4648.285302 4772.570082 4786.636931 5786.075477 5393.839097 5191.803786 4573.596586 5295.890211 3554.068151 3082.486382 1.507966208 1.548285861 1.552849336 1.877080629 1.749833877 1.684290907 1.483736185 1.718057942 1.152987462 1 11.58987881 -8.367143812 3.88892574 1.009290698 1.642391887 0.788377534 0.117681948 0.104509234 2.634604007 0.120597841 0.032027342 4.29E-09 8.367143812 0.633101189 IIAPS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 IIAPSPVK 8 0 Q9HCS5 Q9HCS5 EPB41L4A Band 4.1-like protein 4A 1 IIAPS(1)PVK;IIAPS(1)PVK 90.149 0.028672 22501000 234720 251130 246100 255200 275970 226620 315130 208098 221790 288260 TRUE FALSE 252690.3437 238659.2494 254304.8512 234349.3437 265134.0312 235244.1829 273753.0525 235297.1231 241080.8933 278854.0998 0.906174031 0.855857058 0.911963824 0.840401284 0.950798397 0.843610272 0.98170711 0.843800121 0.864541326 1 18.08915096 -11.10688159 3.718837676 1.003150989 0.888961716 0.342297673 0.046257493 0.00115041 0.000128687 0.042636607 0.010062732 7.82E-12 11.10688159 -0.114189273 IIAPS(ph)RGSPLPVLSWANR ddPTM_A459_MK2206_30min_R1 1 IIAPSRGSPLPVLSWANR 18 1 I3L413;C9J2U0;P24864-2;P24864-3;P24864;I3L1Q9 I3L413 CCNE1 G1/S-specific cyclin-E1 1 IIAPS(0.683)RGS(0.316)PLPVLSWANR 55.912 0.036196 10078000 894.08 651.4 791.01 825.49 951.08 875.93 853.33 767.86 723.99 587.14 TRUE FALSE 818.033801 608.9937416 737.3184451 889.0693828 913.1964697 925.5243996 796.4059127 761.146681 799.2513513 659.8793359 1.239671795 0.922886517 1.117353439 1.347321146 1.383884022 1.40256612 1.206896275 1.153463428 1.211208334 1 9.36605843 -4.38265995 22.48157096 1.206199454 48.77803653 0.002371839 0.149509772 17161.82967 2731291.949 0.039289941 311662.8299 4.14E-05 4.38265995 47.57183708 IIAPSRGS(ph)PLPVLSWANR ddPTM_A459_MK2206_30min_R1 1 IIAPSRGSPLPVLSWANR 18 1 I3L413;C9J2U0;P24864-2;P24864-3;P24864;I3L1Q9 I3L413 CCNE1 G1/S-specific cyclin-E1 1 IIAPS(0.181)RGS(0.817)PLPVLS(0.002)WANR 61.495 0.024934 9156600 1518.9 1638.5 1878 1232.1 1506.4 1574.3 1712.7 1373 1052.5 1025.6 TRUE FALSE 1389.709579 1531.833352 1750.526592 1326.996555 1446.396898 1663.435506 1598.448908 1360.996006 1161.911141 1152.659071 1.205655353 1.328956142 1.518685478 1.151248091 1.254834959 1.443128803 1.386749082 1.180744628 1.008026719 1 10.17075015 -8.061718332 2.992381852 1.004183812 1.328816285 0.609722956 0.103025257 0.187496736 3.144790674 0.084023741 0.028636201 8.68E-09 8.061718332 0.324632473 IIDSNGFPGPET(ph)LER ddPTM_A459_MK2206_30min_R1 1 IIDSNGFPGPETLER 15 0 Q9UEF7 Q9UEF7 KL Klotho;Klotho peptide 1 IIDS(0.006)NGFPGPET(0.994)LER 88.155 0.041903 3370100 457.05 658.83 517.03 531.47 625.03 377.44 546.91 669.1 330.99 322.62 TRUE FALSE 418.1754974 615.9400473 481.9354441 572.4039115 600.1337316 398.8103266 510.4266318 663.2501292 365.397595 362.5886013 1.153305691 1.698729759 1.32915222 1.578659421 1.655136784 1.099897584 1.407729394 1.829208439 1.007747055 1 8.502189761 -8.304586437 21.47966539 1.003868933 1.46749195 0.414709062 0.22101055 102.1725195 50860.36788 0.205509761 0.053068019 4.96E-09 8.304586437 0.463623017 IIDVVYNASNNELVR ddPTM_A459_MK2206_30min_R1 1 IIDVVYNASNNELVR 15 0 P62241;Q5JR95 P62241 RPS8 40S ribosomal protein S8 0 174.72 0.00032777 7099900 1072.1 1051.9 1086.8 1149.1 1079.6 948.6 1105.6 1042.2 872.63 690.15 FALSE TRUE 980.9122652 983.4211188 1013.031044 1237.603881 1036.597246 1002.308912 1031.847441 1033.088155 963.3430112 775.6509924 1.264630968 1.267865481 1.30603977 1.595567972 1.336422252 1.292216373 1.330298616 1.331898193 1.241979989 1 9.599263841 -8.88458817 1.063190552 0.999264435 1.34872395 0.57119115 0.089369995 0.965465518 1.830481779 0.092202632 0.029094181 1.30E-09 8.88458817 0.349459515 IIEDGDGAGAET(ph)PVIENR ddPTM_A459_MK2206_30min_R1 4 IIEDGDGAGAETPVIENR 18 0 A0A5H1ZRS1;Q15154-5 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR 250.38 1.07E-40 39490900 9280.12 9979.8 8754 7726.41 10375.9 8790.06 9130.28 7608.86 7195.72 6631.18 TRUE FALSE 8490.797062 9330.113206 8159.80287 8321.499437 9962.605932 9287.745601 8521.21568 7542.336539 7943.740844 7452.700641 1.139291308 1.251910368 1.094878657 1.116575029 1.336777956 1.246225502 1.143372864 1.012027304 1.065887552 1 12.8635476 -7.625230466 3.979258014 1.029553754 1.19799765 0.549501181 0.069295743 0.186141422 5.470756055 0.037509484 0.020478361 2.37E-08 7.625230466 0.168443895 IIEDGDGAGAET(ph)PVIENR ddPTM_A459_MK2206_30min_R2 4 IIEDGDGAGAETPVIENR 18 0 A0A5H1ZRS1;Q15154-5 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR 300.56 2.89E-95 37945200 70465 87919 76017 93371 88444 89689 84197 68788 72204 81048 TRUE FALSE 75859.85458 83553.07031 78551.36884 85742.29062 84971.24416 93102.17774 73141.83276 77778.82778 78484.17341 78403.4104 0.967558097 1.06568158 1.001887143 1.093604094 1.083769746 1.187476122 0.93289096 0.992033732 1.001030096 1 16.25862879 -7.307820796 24.99973565 0.980824851 1.065676304 0.346396233 0.057304484 521.8009003 281250.2055 0.024666033 0.01662989 4.92E-08 7.307820796 0.084851453 IIEQLS(ph)PQAATSR ddPTM_A459_MK2206_30min_R2 2 IIEQLSPQAATSR 13 0 Q03468;P0DP91;D6R9X7 Q03468 ERCC6 DNA excision repair protein ERCC-6 1 IIEQLS(0.997)PQAAT(0.002)S(0.002)R;IIEQLS(1)PQAATSR 148.18 0.00055335 19064700 76088 94949 88311 103207 88991 89609 106409 75442 84693 89882 TRUE FALSE 81913.35578 90233.97073 91255.24466 94774.65796 85496.7662 93019.13329 92437.37048 85302.52843 92059.44405 86949.1577 0.942083373 1.037778549 1.049524194 1.090000875 0.983296083 1.069810631 1.063119792 0.98106216 1.05877327 1 16.40788443 -4.761508535 8.581554476 1.038708059 0.941218157 0.39093244 0.035504524 0.086433247 72.52927618 0.008499535 0.048965869 1.73E-05 4.761508535 -0.097489903 IIEVVDAIMTTAQSHQR ddPTM_A459_MK2206_30min_R1 1 IIEVVDAIMTTAQSHQR 17 0 Q01813;Q01813-2;Q5VSR5 Q01813 PFKP "ATP-dependent 6-phosphofructokinase, platelet type" 0 114.56 0.0035422 0 360.91 373.75 366.45 335.77 475.21 377.58 442.19 208.9 234.38 278.12 FALSE TRUE 330.2127093 349.4188071 341.576395 361.6310636 456.2813794 398.9582533 412.6923119 207.0736093 258.7446397 312.5756053 1.056425081 1.117869729 1.09278008 1.156939497 1.459747247 1.276357612 1.32029597 0.662475273 0.827782576 1 8.288061379 -7.758048773 24.99999961 0.808846665 1.213266935 0.620615541 0.136345524 56.58301729 417214.3862 0.071913602 0.039341311 1.75E-08 7.758048773 0.404420269 IIFEDDR ddPTM_A459_MK2206_30min_R2 3 IIFEDDR 7 0 D6RC06;D6REP8;D6RE99;D6RD60;P49773 D6RC06 HINT1 Histidine triad nucleotide-binding protein 1 0 ;; 148.21 0.039083 91771000 150920 171034 168180 190459 170893 180335 176978 155636 157876 148613 FALSE TRUE 162474.5512 162540.7003 173787.0373 174897.8905 164182.8822 187197.7748 153740.576 175978.1596 171607.7691 143763.77 1.130149489 1.130609612 1.208837507 1.216564441 1.142032392 1.302120658 1.06939722 1.224078637 1.193678832 1 17.13334062 -10.93006439 4.865015588 0.999763916 1.180766083 0.434500387 0.061498138 0.000150436 1.83E-05 0.056883412 0.013778356 1.17E-11 10.93006439 0.181002167 IIGEDS(ph)PSR ddPTM_A459_MK2206_30min_R1 1 IIGEDSPSR 9 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 IIGEDS(1)PSR 136.81 0.002608 9031700 4142.3 3388 3292.7 2168.4 3377.4 3046.4 3774.4 2896.8 3609.4 4145.7 TRUE FALSE 3789.975633 3167.440584 3069.200698 2335.410544 3242.871006 3218.884535 3522.616663 2871.473583 3984.610046 4659.300614 0.813421573 0.679810308 0.658725623 0.501236288 0.695999523 0.690851439 0.756039791 0.616288542 0.855194884 1 12.1858977 -8.488880573 3.556957075 0.999000495 0.674514839 0.644223667 0.078148169 0.127109411 3.737723565 0.077527431 0.020463565 3.24E-09 8.488880573 -0.324485655 IIGEDS(ph)PSR ddPTM_A459_MK2206_30min_R2 3 IIGEDSPSR 9 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 IIGEDS(0.5)PS(0.5)R;IIGEDS(0.83)PS(0.17)R;IIGEDS(1)PSR 152.69 0.0010799 39508400 145076 132180 118054 125020 130411 120876 149442 108886 102796 135547 TRUE FALSE 156183.1301 125616.1334 121989.8614 114805.4661 125290.4089 125476.0209 129820.0859 123117.7741 111737.0103 131124.1125 1.191109149 0.957994155 0.930338891 0.875548089 0.955510062 0.956925607 0.990055021 0.938940762 0.852146933 1 17.00057348 -4.760304389 4.422643063 0.936621186 1.213822924 0.755223862 0.043074438 0.103664706 4.346555623 0.010902949 0.092497553 1.74E-05 4.760304389 0.277201737 IIGEDS(ph)PSRLDR ddPTM_A459_MK2206_30min_R1 2 IIGEDSPSRLDR 12 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 IIGEDS(0.5)PS(0.5)RLDR;IIGEDS(0.994)PS(0.006)RLDR 106.29 0.004929 37001200 5781.7 4617.4 4648.3 4145.7 5441.3 4157 4865.3 4815.6 3571.4 3234.1 TRUE FALSE 5289.936054 4316.806421 4332.786347 4465.002532 5224.561499 4392.365748 4540.744714 4773.497717 3942.65981 3634.764724 1.455372343 1.187643974 1.192040387 1.228415832 1.437386432 1.208431929 1.249254094 1.313289327 1.084708395 1 11.82764627 -8.40649569 3.64856876 1.002858941 1.27719149 0.537130022 0.090897379 0.173845117 3.969131848 0.086238347 0.022843565 3.92E-09 8.40649569 0.274332548 IIGEDS(ph)PSRLDR ddPTM_A459_MK2206_30min_R2 2 IIGEDSPSRLDR 12 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 IIGEDS(0.966)PS(0.034)RLDR;IIGEDS(0.993)PS(0.007)RLDR 103.11 0.0060478 52264000 63652 84572 76179 92946 97061 76311 91833 52762 75956 73971 TRUE FALSE 68525.24606 80372.27746 78718.76984 85352.01448 93249.89745 79215.06858 79775.21679 59658.17456 82562.51558 71557.33233 0.957627176 1.123187168 1.100079716 1.192778038 1.303149439 1.107015396 1.11484336 0.833711552 1.153795326 1 16.12681198 -10.57153549 4.74595821 0.999996916 1.100980182 0.056488858 0.120330325 4.14E-06 8.29E-07 0.122691976 0.029756266 2.68E-11 10.57153549 0.100983266 IIIEELSLVAAS(ph)PTLSPR ddPTM_A459_MK2206_30min_R1 2 IIIEELSLVAASPTLSPR 18 0 Q16513-3;Q16513-2;Q16513;Q16513-4;B1AL79;H0Y5V5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 IIIEELSLVAAS(0.931)PT(0.054)LS(0.015)PR;IIIEELS(0.001)LVAAS(0.993)PT(0.006)LSPR 219.53 2.47E-14 29451400 4442.2 3884.3 3838.8 3759.9 4961.3 4187.1 4450.4 4233.3 3590.9 3611 TRUE FALSE 4064.367563 3631.431364 3578.232952 4049.488149 4763.680915 4424.169984 4153.521936 4196.288704 3964.186905 4058.357942 1.001480801 0.894803124 0.881694765 0.997814438 1.173795161 1.090137944 1.023448891 1.03398684 0.976795779 1 11.9866804 -5.988297619 9.449036969 1.05516245 0.925478293 0.468919113 0.05879709 0.169087991 115.4805147 0.017560894 0.025562725 1.03E-06 5.988297619 -0.129684157 IIIEELSLVAASPTLS(ph)PR ddPTM_A459_MK2206_30min_R2 1 IIIEELSLVAASPTLSPR 18 0 Q16513-3;Q16513-2;Q16513;Q16513-4;B1AL79;H0Y5V5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 IIIEELS(0.029)LVAAS(0.334)PT(0.122)LS(0.515)PR 92.264 0.0050572 1600300 2970.9 3089.3 3164 4932.7 4469.5 4362 3512.2 2438 4202.9 4295.4 TRUE FALSE 3198.354388 2935.889854 3269.486181 4529.682631 4294.004973 4527.998967 3051.043921 2756.654971 4568.460645 4155.24145 0.769715654 0.706550965 0.786834224 1.090112978 1.033394816 1.089707787 0.734263931 0.663416315 1.099445291 1 12.0207166 -5.578927425 9.407239517 0.943711609 0.740220008 0.301851789 0.142357518 0.462895921 73.39940916 0.041966578 0.072832759 2.64E-06 5.578927425 -0.203491601 IILDLISES(ph)PIKGR ddPTM_A459_MK2206_30min_R1 3 IILDLISESPIKGR 14 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 IILDLIS(0.024)ES(0.976)PIKGR;IILDLIS(0.012)ES(0.988)PIKGR;IILDLIS(0.001)ES(0.999)PIKGR 128.74 0.00061044 39527200 2936.86 3138.08 3318.12 2920.72 2634.66 2773.26 2629.87 2720.92 2661.58 2420.46 TRUE FALSE 2687.064635 2933.790422 3092.895259 3145.67436 2529.715913 2930.279585 2454.436171 2697.131283 2938.260766 2720.324858 0.987773437 1.078470615 1.136958055 1.156359819 0.92993155 1.07718002 0.90225848 0.991473969 1.080113927 1 11.40956323 -6.260780417 24.99940567 0.995689316 1.092436744 0.320115465 0.066389593 72.63416264 2755542.689 0.020301117 0.024689316 5.49E-07 6.260780417 0.096747428 IILDLISES(ph)PIKGR ddPTM_A459_MK2206_30min_R2 2 IILDLISESPIKGR 14 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 IILDLIS(0.016)ES(0.984)PIKGR;IILDLISES(1)PIKGR 135.69 0.00033066 30244000 64653 96542 88002 101774 98129 85152 99081 76409 87649 90291 TRUE FALSE 69602.88339 91747.86467 90935.94276 93458.73864 94275.9624 88392.51903 86071.54568 86395.91865 95272.55159 87344.81206 0.796874843 1.050410007 1.041114413 1.069997593 1.079353887 1.011995068 0.98542253 0.989136236 1.090763714 1 16.41443439 -4.759244158 24.99910636 1.035362514 0.796874536 0.79881766 0.035904117 26.3773227 300313.4607 0.009445427 0.060757564 1.74E-05 4.759244158 -0.238487978 IILDLISESPIKGR ddPTM_A459_MK2206_30min_R1 1 IILDLISESPIKGR 14 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 167.73 0.00058935 1477400 804.55 735.93 753.76 784.23 659.84 554.03 821.47 919.46 612.05 742.74 FALSE TRUE 736.1187976 688.0208232 702.5968713 844.6315305 633.5571756 585.3986998 766.6712352 911.4212582 675.6747877 834.7562386 0.881836833 0.824217648 0.84167909 1.01183015 0.758972675 0.701281012 0.918437263 1.091841206 0.809427659 1 9.70521116 -7.515652924 24.98616595 0.971408512 0.838161249 0.263086699 0.099419101 464.9588129 1607797.25 0.04527982 0.027497719 3.05E-08 7.515652924 -0.133247263 IINEPT(ph)AAAIAYGLDR ddPTM_A459_MK2206_30min_R1 1 IINEPTAAAIAYGLDR 16 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;P17066 A0A0G2JIW1;P17066 HSPA1B;HSPA1A;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 1 IINEPT(1)AAAIAYGLDR 119.62 0.0029149 0 312.08 261.91 285.48 450.92 303.96 370.6 408.49 153.41 268.54 378.37 TRUE FALSE 285.5359572 244.8596114 266.102413 485.6499365 291.8526296 391.5830517 381.2403774 152.0687525 296.455694 425.2453321 0.671461708 0.575807876 0.625762102 1.142046484 0.686315892 0.920840329 0.896518665 0.357602403 0.697140384 1 8.73215159 -5.576347202 24.99999947 0.797326094 0.617911257 0.153886272 0.201335915 188.2682331 88026.62105 0.056754687 0.098302014 2.65E-06 5.576347202 -0.179414838 IINEPTAAAIAYGLDKK ddPTM_A459_MK2206_30min_R1 1 IINEPTAAAIAYGLDKK 17 1 P11142;E9PKE3;P11142-2;E9PN89;E9PI65;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 144.25 0.00066877 20193000 3007.6 4546.6 3278.4 3326.5 2268.5 2384.8 2926.8 2983.8 3028.9 3092.7 FALSE TRUE 2751.787826 4250.615514 3055.871342 3582.707606 2178.140841 2519.825315 2731.558512 2957.712951 3343.764994 3475.847025 0.791688416 1.222900629 0.87917314 1.030743753 0.626650375 0.724952881 0.78586845 0.850933004 0.962000045 1 11.76314887 -6.223237889 24.97689141 0.810648341 0.991113721 0.213070106 0.144842724 757.9776557 495580.5859 0.04187003 0.054052998 5.98E-07 6.223237889 0.18046538 IINEPTAAAIAYGLDKK ddPTM_A459_MK2206_30min_R2 1 IINEPTAAAIAYGLDKK 17 1 P11142;E9PKE3;P11142-2;E9PN89;E9PI65;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 116.87 0.0025745 0 7643.7 8812.2 7821.7 6757.6 7349.5 8526.4 7241.8 5887.5 6655 7203.7 FALSE TRUE 8228.907549 8374.598962 8082.471574 6205.482464 7060.921702 8850.878127 6290.942961 6657.016465 7233.839871 6968.643859 1.180847768 1.201754478 1.159834214 0.890486383 1.013241865 1.270100511 0.902749959 0.955281487 1.038055613 1 12.76666221 -5.606092264 8.488682244 1.014813037 1.188683182 0.387134946 0.098866078 0.279393189 25.22040764 0.027936967 0.048498311 2.48E-06 5.606092264 0.173870145 IINLGPVHPGPLS(ph)PEPQPMGVR ddPTM_A459_MK2206_30min_R2 1 IINLGPVHPGPLSPEPQPMGVR 22 0 Q86T03;Q86T03-2 Q86T03 TMEM55B "Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase" 1 IINLGPVHPGPLS(1)PEPQPMGVR 102.78 6.39E-05 2079900 18827 15257 11065 16305 14007 14741 15838 8451.7 11805 12962 TRUE FALSE 20268.4096 14499.35957 11433.90158 14972.82934 13457.0148 15301.97908 13758.45158 9556.366209 12831.77756 12539.051 1.616422933 1.156336278 0.911863392 1.194095896 1.073208395 1.220345868 1.097248235 0.762128347 1.023345193 1 13.61414054 -4.784298083 3.474363661 1.041852756 1.6852022 0.657835934 0.125328433 0.187421953 3.712357495 0.033616297 0.319300388 1.64E-05 4.784298083 0.643349444 IIPELVGS(ph)PTQSTSSR ddPTM_A459_MK2206_30min_R1 2 IIPELVGSPTQSTSSR 16 0 Q9NSI6-3;Q9NSI6-2;Q9NSI6;H7C409 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 IIPELVGS(0.933)PT(0.041)QS(0.017)T(0.003)S(0.002)S(0.004)R;IIPELVGS(0.899)PT(0.096)QST(0.003)S(0.001)SR 216.77 1.35E-10 22924500 2854.1 2570.3 2371.3 2437.4 2426.7 2471.7 2603.7 2625 2440.2 2197.21 TRUE FALSE 2611.343808 2402.973003 2210.342763 2625.12897 2330.0394 2611.645518 2430.011924 2602.049902 2693.867522 2469.416963 1.057473828 0.97309326 0.895086895 1.063056183 0.943558514 1.057596006 0.984042776 1.053710224 1.090892127 1 11.26995474 -7.220669705 1.122003413 1.04884265 0.985445009 0.13302153 0.055484982 0.914730376 2.259589584 0.036735775 0.021628344 6.02E-08 7.220669705 -0.063397641 IIPELVGS(ph)PTQSTSSR ddPTM_A459_MK2206_30min_R2 2 IIPELVGSPTQSTSSR 16 0 Q9NSI6-3;Q9NSI6-2;Q9NSI6;H7C409 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 IIPELVGS(0.502)PT(0.061)QS(0.012)T(0.012)S(0.011)S(0.404)R;IIPELVGS(0.811)PT(0.164)QS(0.017)T(0.005)S(0.002)S(0.001)R 229.02 3.47E-15 16767700 42275 48280 43031 52781 48350 52473 52043 36821 41005 38421 TRUE FALSE 45511.6065 45882.48541 44465.63206 48468.62346 46451.53606 54469.89678 45209.69159 41633.63113 44571.54078 37167.32592 1.224505809 1.234484437 1.196363498 1.304065393 1.249794945 1.465531766 1.216382682 1.120167515 1.19921301 1 15.18174727 -8.455018728 1.014487924 1.011180912 1.271172353 0.496489148 0.080227057 0.471403232 1.066459806 0.079975822 0.026719872 3.51E-09 8.455018728 0.259991441 IIPELVGSPTQSTSS(ph)R ddPTM_A459_MK2206_30min_R1 1 IIPELVGSPTQSTSSR 16 0 Q9NSI6-3;Q9NSI6-2;Q9NSI6;H7C409 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 IIPELVGS(0.107)PT(0.147)QS(0.044)T(0.006)S(0.019)S(0.678)R 158.14 7.11E-05 15484000 2656.4 2212 2278 2283.8 2369.9 2796.9 3006.6 2376.5 2276.7 2162.9 TRUE FALSE 2430.459231 2067.998398 2123.375707 2459.698672 2275.501865 2955.258061 2806.0352 2355.722511 2513.371112 2430.856381 0.999836621 0.850728333 0.873509321 1.011865074 0.936090623 1.215727134 1.154340183 0.969091605 1.033944717 1 11.24724894 -6.62129237 13.88000199 1.077659759 0.92999992 0.427324326 0.081071599 0.72209617 97.91981887 0.028355868 0.028354186 2.39E-07 6.62129237 -0.147659839 IIPELVGSPTQSTSS(ph)R ddPTM_A459_MK2206_30min_R2 2 IIPELVGSPTQSTSSR 16 0 Q9NSI6-3;Q9NSI6-2;Q9NSI6;H7C409 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 IIPELVGS(0.188)PT(0.188)QS(0.008)T(0.003)S(0.003)S(0.611)R;IIPELVGS(0.002)PT(0.009)QS(0.002)T(0.002)S(0.068)S(0.916)R 145.79 0.00036515 16634900 22847 28019 25748 37987 29391 36378 32112 24406 27922 25841 TRUE FALSE 24596.18389 26627.6172 26606.42547 34883.34059 28236.96166 37762.39028 27895.65583 27595.948 30350.60509 24997.81029 0.983933537 1.065197987 1.064350244 1.395455849 1.129577405 1.510627925 1.115923975 1.103934612 1.214130547 1 14.60951411 -5.551846126 24.85022365 1.220339345 1.034617763 0.237808989 0.14132078 250.1067172 214557.6589 0.037570051 0.0650746 2.81E-06 5.551846126 -0.185721582 IIPGFMCQGGDFTR ddPTM_A459_MK2206_30min_R1 2 IIPGFMCQGGDFTR 14 0 P62937;F8WE65;C9J5S7;P0DN26;A0A0H2UH34;A0A0B4J2A2;A0A075B767;A0A075B759;Q9Y536;F5H284 P62937 PPIA;PPIAL4C;PPIAL4E;PPIAL4A;PPIAL4D "Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D" 0 ; 275.48 6.82E-43 443560000 1780.2 1893.69 1675.6 1804.65 2190.07 1766.24 1665.4 1794.16 1592.25 1346.17 FALSE TRUE 1628.784642 1770.410437 1561.86494 1943.644456 2102.834874 1866.242982 1554.304205 1778.473848 1757.770085 1512.943703 1.076566589 1.170176018 1.032335134 1.284677316 1.389896313 1.233517797 1.027337767 1.175505635 1.161821211 1 10.56314259 -9.227746319 0.714145601 0.996896738 1.184060209 0.194071089 0.106363893 4.810574157 3.401999081 0.160615503 0.042587933 5.92E-10 9.227746319 0.18716347 IIPGFMCQGGDFTR ddPTM_A459_MK2206_30min_R2 1 IIPGFMCQGGDFTR 14 0 P62937;F8WE65;C9J5S7;P0DN26;A0A0H2UH34;A0A0B4J2A2;A0A075B767;A0A075B759;Q9Y536;F5H284 P62937 PPIA;PPIAL4C;PPIAL4E;PPIAL4A;PPIAL4D "Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D" 0 189.57 0.014479 10836000 10208 17183 15018 13005 15392 13700 15798 10259 13389 14954 FALSE TRUE 10989.53233 16329.71721 15518.69262 11942.4499 14787.63274 14221.3631 13723.70362 11599.88652 14553.55102 14466.0522 0.759677359 1.128830242 1.072766253 0.825550035 1.022230014 0.983085288 0.948683402 0.801869533 1.006048562 1 13.82038364 -7.527074609 24.9901032 0.917430741 0.973231792 0.00276291 0.114915836 455.9709985 2715642.644 0.0524188 0.030433612 2.97E-08 7.527074609 0.055801051 IIPTLEEGLQLPS(ph)PTATSQLPLESDAVECLNYQHYK ddPTM_A459_MK2206_30min_R1 1 IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK 36 0 P61978;P61978-2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 IIPTLEEGLQLPS(0.318)PT(0.318)AT(0.318)S(0.046)QLPLESDAVECLNYQHYK 131.81 6.31E-30 48791000 2411.4 2481.1 2332.8 2038.9 2630.4 2004.3 2579.8 2350.1 2165.6 2271.5 TRUE FALSE 2206.297767 2319.579939 2174.456036 2195.936431 2525.625598 2117.781734 2407.706249 2329.553323 2390.72187 2552.910569 0.864228381 0.908602114 0.851755664 0.860169744 0.98931221 0.829555786 0.94312205 0.912508786 0.936469103 1 11.31792728 -10.31148025 0.159699163 1.09766206 0.847510499 0.411199761 0.042471944 22.80011954 0.844608001 1.20903367 0.245489122 4.88E-11 10.31148025 -0.250151561 IIPTLEEGLQLPSPT(ph)ATSQLPLESDAVECLNYQHYK ddPTM_A459_MK2206_30min_R1 2 IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK 36 0 P61978;P61978-2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 IIPTLEEGLQLPS(0.062)PT(0.307)AT(0.307)S(0.307)QLPLES(0.017)DAVECLNYQHYK;IIPTLEEGLQLPS(0.062)PT(0.312)AT(0.312)S(0.312)QLPLES(0.001)DAVECLNYQHYK 97.352 7.99E-14 112080100 2004.43 2126.14 2060.31 1515.55 2003.08 1630.21 1909.15 1784.51 1582.62 1695.26 TRUE FALSE 1833.942703 1987.7279 1920.461898 1632.277924 1923.293082 1722.511081 1781.794087 1768.908217 1747.139012 1905.281607 0.962557291 1.043272497 1.007967478 0.856712161 1.009453445 0.904071647 0.935186736 0.928423499 0.916997784 1 10.89578853 -5.604781954 24.9999997 0.934397454 1.008598149 0.324377762 0.045335291 27.21775803 8305.226155 0.011376284 0.019704301 2.48E-06 5.604781954 0.074200695 IIS(ph)IFSGTEK ddPTM_A459_MK2206_30min_R1 1 IISIFSGTEK 10 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 IIS(1)IFSGTEK 130.1 0.0028366 6014900 2279.2 2694 2363.9 2749.7 2384.4 2220.5 2694.8 2431.8 2268.9 2296.8 TRUE FALSE 2085.342071 2518.62011 2203.445054 2961.48237 2289.424299 2346.222791 2515.034809 2410.539029 2504.760274 2581.344924 0.807850997 0.975700724 0.853603497 1.147263329 0.886911423 0.908914872 0.974311796 0.933830658 0.970331493 1 11.33390721 -4.126772196 1.835907499 0.959809845 1.19E-07 0.258954199 0.076190724 12.78958861 7.498038977 0.019777428 38.43065382 7.47E-05 4.126772196 -0.959809726 IIS(ph)NASCTTNCLAPLAK ddPTM_A459_MK2206_30min_R1 2 IISNASCTTNCLAPLAK 17 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 IIS(0.997)NASCT(0.003)TNCLAPLAK;IIS(1)NASCTTNCLAPLAK 332.56 6.92E-136 150234000 8006.5 9056.4 8823.6 5837.6 7356.7 6537.9 8231.2 6553.7 7066.1 6582.8 TRUE FALSE 7325.505131 8466.826714 8224.678616 6287.212963 7063.667061 6908.070248 7682.111667 6496.401692 7800.646381 7398.326962 0.990156987 1.144424511 1.111694395 0.849815505 0.954765462 0.933734111 1.038357957 0.878090645 1.054379784 1 12.85298334 -5.736254697 24.99954781 0.955515746 1.088325294 0.391669448 0.070418931 209.7613706 208217.7144 0.01819884 0.031505444 1.84E-06 5.736254697 0.132809548 IIS(ph)NASCTTNCLAPLAK ddPTM_A459_MK2206_30min_R2 2 IISNASCTTNCLAPLAK 17 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 IIS(1)NASCTTNCLAPLAK;IIS(0.988)NAS(0.012)CTTNCLAPLAK 253.34 7.71E-31 104427000 166879 224152 186297 208762 197386 180899 256300 170493 147932 207306 TRUE FALSE 179655.3845 213020.9376 192508.049 191705.4768 189635.6339 187783.2382 222647.5021 192777.0205 160798.858 200541.6222 0.895850859 1.062228057 0.959940619 0.955938596 0.945617333 0.936380369 1.110230882 0.961281845 0.801822864 1 17.61354217 -8.019381869 24.95713101 0.894458387 0.983220635 0.152519304 0.073906639 1205.72078 1552541.068 0.046312239 0.018098491 9.56E-09 8.019381869 0.088762249 IIS(ph)SIEQK ddPTM_A459_MK2206_30min_R2 1 IISSIEQK 8 0 P62258;P62258-2;B4DJF2;I3L3T1;K7EIT4 P62258 YWHAE 14-3-3 protein epsilon 1 IIS(0.887)S(0.113)IEQK 116.77 0.0091902 1522800 13817 14341 13448 17120 11930 10147 15614 12675 10010 16431 TRUE FALSE 14874.84014 13628.84679 13896.34961 15721.24124 11461.56826 10533.1512 13563.86304 14331.66602 10880.65171 15894.85782 0.935827191 0.857437478 0.874266997 0.989077186 0.721086555 0.662676654 0.853349127 0.901654245 0.684539103 1 13.95627249 -6.264070771 24.99771943 0.794379855 0.907252215 0.216215321 0.101552373 365.9063473 3476039.645 0.030866291 0.036613049 5.44E-07 6.264070771 0.11287236 IISIFS(ph)GTEK ddPTM_A459_MK2206_30min_R2 1 IISIFSGTEK 10 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 IISIFS(0.993)GT(0.007)EK 124.6 0.0036627 0 27150 23444 30125 26990 25717 18602 26042 25791 17649 31211 TRUE FALSE 29228.62487 22279.80505 31129.35246 24784.83066 24707.22136 19309.91215 22622.65412 29161.97225 19184.07812 30192.58763 0.968072867 0.737923007 1.031026318 0.820891239 0.818320764 0.639558039 0.749278412 0.965865285 0.635390327 1 14.88190679 -5.98247871 24.80109538 0.791779621 0.900075618 0.122008898 0.131097876 464.2764179 657170.0259 0.035459849 0.052583075 1.04E-06 5.98247871 0.108295997 IISLDGSKAIINS(ph)T(ph)IT(ph)PNMT(ph)FTK ddPTM_A459_MK2206_30min_R1 1 IISLDGSKAIINSTITPNMTFTK 23 1 Q86YM7-3;Q86YM7-2;Q86YM7 Q86YM7-3 HOMER1 Homer protein homolog 1 4 IIS(0.033)LDGS(0.379)KAIINS(0.768)T(0.798)IT(0.877)PNMT(0.572)FT(0.572)K 49.768 0.039647 0 352.17 455.94 332.85 428.07 251.7 330.2 411.82 225.53 299.31 401.73 TRUE FALSE 322.2160922 426.2582231 310.2570694 461.0400256 241.674256 348.8956386 384.3482392 223.558215 330.4243456 451.4993453 0.713657939 0.944094886 0.687170585 1.021131105 0.535270446 0.772748936 0.851270867 0.495146266 0.731837929 1 8.818580086 -6.262753967 24.99551446 0.713899479 0.837816349 0.093194344 0.163486899 260.5843848 4954730.024 0.0472318 0.056517893 5.46E-07 6.262753967 0.12391687 IISNASCTT(ph)NCLAPLAK ddPTM_A459_MK2206_30min_R1 2 IISNASCTTNCLAPLAK 17 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 IIS(0.106)NAS(0.001)CT(0.271)T(0.622)NCLAPLAK;IISNASCT(0.066)T(0.934)NCLAPLAK 204.81 3.46E-08 34194000 14385.8 15729.5 16024.2 13667.4 15162.3 14122.5 16480.4 12924.3 12908 10915.5 TRUE FALSE 13162.21217 14705.50669 14936.52195 14720.06552 14558.35348 14922.10375 15381.02259 12811.30421 14249.83279 12267.79455 1.072907776 1.198708263 1.217539297 1.199895014 1.18671318 1.216364008 1.25377243 1.044303779 1.161564349 1 13.58258829 -8.559842307 0.957280994 1.005818837 1.190694694 0.438697033 0.060599691 0.558246118 1.121209631 0.056754405 0.019159665 2.76E-09 8.559842307 0.184875856 IISNASCTT(ph)NCLAPLAK ddPTM_A459_MK2206_30min_R2 2 IISNASCTTNCLAPLAK 17 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 IIS(0.119)NAS(0.001)CT(0.267)T(0.613)NCLAPLAK;IISNASCT(0.161)T(0.839)NCLAPLAK 211.16 6.95E-09 37142000 137755 158691 144638 152268 144973 147212 164397 148498 136944 133180 TRUE FALSE 148301.6287 150810.6357 149460.1587 139827.2173 139280.6316 152814.2558 142811.4764 167907.1985 148855.1416 128834.3475 1.151103192 1.170577867 1.160095593 1.085325614 1.081083067 1.186129777 1.108489151 1.303279768 1.155399507 1 16.97515774 IISNASCTTNCLAPLAK ddPTM_A459_MK2206_30min_R1 2 IISNASCTTNCLAPLAK 17 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 204.67 2.22E-07 184763000 13476.4 13545.4 14235 12782.5 14570.9 12761.1 14664.9 13520 10675.1 11170.3 FALSE TRUE 12330.16141 12663.592 13268.76786 13767.01036 13990.5102 13483.62245 13686.63128 13401.79607 11784.81485 12554.1611 0.982157336 1.008716704 1.056921905 1.096609344 1.114412193 1.074036119 1.090206759 1.067518249 0.938717829 1 13.61587801 -11.09565031 3.423762745 0.998179944 1.052832664 0.061248857 0.052678885 41288816.44 1061.148716 592545.0533 0.013448544 8.02E-12 11.09565031 0.05465272 IISPGS(ph)STPSSTR ddPTM_A459_MK2206_30min_R1 1 IISPGSSTPSSTR 13 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 IIS(0.027)PGS(0.452)S(0.452)T(0.069)PSSTR 82.705 0.032505 5399000 4186.9 3298.8 3509.4 3180.6 3549.6 3633.2 3746.4 3493.3 2646 2994.9 TRUE FALSE 3830.782169 3084.04752 3271.191706 3425.570363 3408.211916 3838.908644 3496.484492 3462.758446 2921.061169 3365.930822 1.138104843 0.916253982 0.971853516 1.017718588 1.012561486 1.140519175 1.038786795 1.028766968 0.867831611 1 11.71678981 -8.227219006 21.97606022 0.933915956 1.029713047 0.240093196 0.070358353 186.0795345 119499.35 0.047852532 0.018081304 5.93E-09 8.227219006 0.09579709 IISPGSSTPS(ph)STRSPPPGR ddPTM_A459_MK2206_30min_R1 1 IISPGSSTPSSTRSPPPGR 19 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 IISPGSSTPS(0.306)S(0.306)T(0.306)RS(0.083)PPPGR 74.726 0.0053408 12478000 1703.8 2143.5 1975.4 1680.9 2175.8 1754.4 1898.1 2268.2 1533.3 1328.2 TRUE FALSE 1558.882863 2003.95776 1841.315352 1810.363209 2089.133279 1853.732612 1771.481212 2248.369367 1692.692022 1492.747443 1.044304494 1.342462698 1.233507624 1.212772607 1.399522262 1.241826017 1.186725337 1.506195423 1.13394401 1 10.54375438 -8.522137611 24.95393993 0.999999983 1.273715795 0.348363855 0.118804374 64.58110948 2174406.81 0.108427087 0.027995753 3.01E-09 8.522137611 0.273715812 IISPGSSTPSSTRS(ph)PPPGR ddPTM_A459_MK2206_30min_R2 1 IISPGSSTPSSTRSPPPGR 19 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 IISPGSSTPS(0.001)S(0.001)T(0.004)RS(0.994)PPPGR 88.319 0.021682 0 25673 41204 34421 44549 37278 41254 34493 32815 38507 29941 TRUE FALSE 27638.54462 39157.86928 35568.57896 40909.20419 35814.27841 42823.94988 29964.02767 37104.03317 41856.26926 28964.02762 0.954236924 1.351948347 1.228025999 1.41241421 1.236508917 1.478521925 1.034525587 1.281038454 1.445112185 1 14.82197461 -10.30230565 14.91152858 0.999998599 1.273234738 0.200455226 0.161073468 0 0 0.148270109 0.035960784 4.99E-11 10.30230565 0.273236139 IISPGSSTPSSTRS(ph)PPPGRDESYPR ddPTM_A459_MK2206_30min_R1 1 IISPGSSTPSSTRSPPPGRDESYPR 25 2 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 IIS(0.001)PGS(0.023)S(0.019)T(0.021)PS(0.05)S(0.05)T(0.05)RS(0.785)PPPGRDESYPR 68.401 0.0017838 10079000 550.49 693.63 562.32 428.31 711.13 455.2 505.35 531.97 357.91 318.52 TRUE FALSE 503.6679348 648.4745609 524.1512851 461.2985104 682.8041863 480.9730306 471.6390236 527.3190424 395.1160253 357.9806623 1.406969671 1.811479304 1.464188824 1.288612931 1.907377292 1.34357266 1.317498606 1.473037786 1.103735668 1 8.483737847 -8.17572811 0.71699203 0.989498738 1.563062085 0.47347827 0.192673665 0.575788195 0.646047936 0.182691265 0.077380665 6.67E-09 8.17572811 0.573563347 IISS(ph)SPNK ddPTM_A459_MK2206_30min_R2 1 IISSSPNK 8 0 B9EGE7;Q8TCN5-2;Q8TCN5 B9EGE7 ZNF507 Zinc finger protein 507 1 IIS(0.002)S(0.499)S(0.499)PNK 120.31 0.0074507 4200700 77772 72948 80723 68857 75035 64710 91070 68708 67061 89842 TRUE FALSE 83726.28412 69325.5084 83414.26453 63231.16284 72088.74888 67172.58439 79112.39961 77688.37151 72893.84456 86910.4629 0.963362538 0.797665852 0.959772411 0.727543736 0.829459958 0.772894105 0.910274747 0.893889745 0.838723465 1 16.40724225 -10.74072887 6.317668969 1.000001693 0.8521253 0.257307054 0.073854287 1.70E-06 2.11E-07 0.069155622 0.01677251 1.82E-11 10.74072887 -0.147876392 IISSS(ph)PNKK ddPTM_A459_MK2206_30min_R2 2 IISSSPNKK 9 1 B9EGE7;Q8TCN5-2;Q8TCN5 B9EGE7 ZNF507 Zinc finger protein 507 1 IIS(0.002)S(0.238)S(0.76)PNKK;IIS(0.017)S(0.099)S(0.884)PNKK 119.34 0.012443 140633000 429937 401523 413192 375243 436298 275014 475346 393848 371029 500119 TRUE FALSE 462853.3073 381583.9517 426967.6151 344584.4466 419166.7483 285479.8505 412932.4992 445325.2859 403300.4318 483800.158 0.956703506 0.788722255 0.882528887 0.71224542 0.866404736 0.590078043 0.853518736 0.920473626 0.83360955 1 18.88405171 -8.603424995 0.988634695 0.993769387 0.804538177 0.227903086 0.100122531 0.953905359 2.010696136 0.094901514 0.03147756 2.49E-09 8.603424995 -0.189231209 IISVT(ph)PVK ddPTM_A459_MK2206_30min_R1 2 IISVTPVK 8 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 IIS(0.006)VT(0.994)PVK;IIS(0.158)VT(0.842)PVK 140.49 0.0054686 144335000 18156.6 16195.8 15590.6 12400.6 13503.7 12792.8 15282.6 12433.8 15955.6 16112.3 TRUE FALSE 16612.28583 15141.45048 14532.35351 13355.69636 12965.81903 13517.11728 14263.12564 12325.0926 17614.24172 18108.41337 0.917379424 0.836155558 0.802519427 0.737540948 0.716010772 0.746455087 0.787651869 0.680627968 0.972710384 1 14.14437252 -8.348484282 6.756097554 0.993661015 0.77685987 0.636189164 0.063048153 0.179085003 11.54783642 0.064313008 0.016691804 4.48E-09 8.348484282 -0.216801146 IISVT(ph)PVK ddPTM_A459_MK2206_30min_R2 2 IISVTPVK 8 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 IIS(0.014)VT(0.986)PVK;IIS(0.049)VT(0.951)PVK 103.31 0.036288 199929000 334948 305631 267561 302235 303009 231131 328567 219049 210435 263164 TRUE FALSE 360591.8764 290453.809 276481.3502 277541.4337 291111.3442 239926.8522 285425.7582 247679.4564 228738.2559 254576.9802 1.416435516 1.14092723 1.086042226 1.090206324 1.143510084 0.942453053 1.12117662 0.972905941 0.898503296 1 17.95774245 -1.522878745 0.552317092 1.004245141 18.28283757 0.737832626 0.071037566 72.69521512 0.660910303 0.035539756 1491.432749 0.03 1.522878745 17.27859243 IISVT(ph)PVKNIDPVK ddPTM_A459_MK2206_30min_R2 1 IISVTPVKNIDPVK 14 1 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 IIS(0.01)VT(0.99)PVKNIDPVK 95.873 0.016879 23367000 48716 93528 71536 80740 111540 73033 95286 56702 85443 71301 TRUE FALSE 52445.73442 88883.53552 73920.97454 74143.28373 107160.3792 75812.32199 82774.83374 64113.14609 92874.67769 68974.45421 0.760364616 1.288644275 1.071715251 1.074938317 1.55362417 1.099136236 1.200079576 0.929520165 1.346508338 1 16.07377452 -4.751738149 24.98419659 1.175672271 0.76036378 0.336210128 0.17425694 457.2128015 1177406.919 0.04200143 0.539687573 1.77E-05 4.751738149 -0.415308492 IIVEET(ph)KSNGQTVIEEK ddPTM_A459_MK2206_30min_R1 1 IIVEETKSNGQTVIEEK 17 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5 B1ALK7 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 IIVEET(0.796)KS(0.166)NGQT(0.038)VIEEK 75.215 0.03093 11001000 1857.9 2747.8 2743 2400.5 1789.6 1698.9 2133.5 2457.1 2387.4 2041.5 TRUE FALSE 1699.875849 2568.917721 2556.812802 2585.386926 1718.316442 1795.09025 1991.178108 2435.617834 2635.578773 2294.416433 0.740875032 1.119638826 1.11436301 1.126816775 0.748912193 0.782373341 0.867836405 1.061541314 1.148692424 1 11.16391155 -7.876249407 6.769672416 1.083757962 0.938549273 0.160654627 0.146597231 0.450795928 24.73716752 0.088951192 0.042332731 1.33E-08 7.876249407 -0.145208689 IIVEKPFGR ddPTM_A459_MK2206_30min_R1 1 IIVEKPFGR 9 1 P11413-3;P11413;P11413-2;E7EUI8;E9PD92;E7EM57 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 112.41 0.027361 21270000 6990 6382 7326.8 6280.3 5555 4634.8 4609.1 4738.2 3602.7 3381.8 FALSE TRUE 6395.463794 5966.53064 6829.47723 6764.009794 5333.732587 4897.218371 4301.635349 4696.774417 3977.213557 3800.762915 1.682678961 1.569824473 1.796870097 1.779645283 1.403332096 1.288482991 1.131782078 1.235745171 1.046425059 1 11.89207332 -6.648061965 1.720730699 1.126171291 1.704877942 0.895053325 0.091990699 0.112370729 0.68506637 0.03802708 0.037811266 2.25E-07 6.648061965 0.578706652 IIVEKPFGR ddPTM_A459_MK2206_30min_R2 1 IIVEKPFGR 9 1 P11413-3;P11413;P11413-2;E7EUI8;E9PD92;E7EM57 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 127.46 0.012845 16372000 79746 105700 93095 124480 101160 104410 97896 85902 85013 89313 FALSE TRUE 85851.41507 100451.0917 96198.74084 114309.5858 97187.95011 108383.3957 85042.13761 97129.68635 92407.27707 86398.72412 0.993665311 1.162645545 1.113427794 1.323047151 1.124877145 1.254455975 0.984298535 1.124202786 1.069544464 1 16.39872239 -7.26728136 24.99535307 1.054861682 1.165470654 0.290692922 0.089242834 684.0473009 2926728.988 0.036452702 0.025317689 5.40E-08 7.26728136 0.110608972 IIY(ph)CDSNS(ph)QIS(ph)CT(ph)GS(ph)SKK ddPTM_A459_MK2206_30min_R2 1 IIYCDSNSQISCTGSSKK 18 1 A0A087WUA7;A4D1E1 A0A087WUA7 ZNF804B Zinc finger protein 804B 5 IIY(0.881)CDS(0.233)NS(0.891)QIS(0.944)CT(0.945)GS(0.553)S(0.553)KK 44.807 0.045988 0 0 436.82 0 0 0 467.74 720.46 0 0 429.13 TRUE FALSE 0 415.128154 0 0 0 485.5401735 625.8627366 0 0 415.1275232 0 1.000001519 0 0 0 1.169616916 1.507639705 0 0 1 8.697410777 -6.744455991 24.99913869 0.721213232 0.222222565 0.206551375 0.523452383 475.3015043 699631.0931 0.186755592 0.186297284 1.80E-07 6.744455991 -0.498990667 IIYGGS(ph)VTGATCK ddPTM_A459_MK2206_30min_R1 1 IIYGGSVTGATCK 13 0 P60174;P60174-3;P60174-4 P60174 TPI1 Triosephosphate isomerase 1 IIYGGS(0.993)VT(0.007)GATCK 209.19 8.74E-06 20799000 2739.7 2429 2620.8 2345.5 2501.4 2503.5 2659.3 2645.1 1928.9 2201.7 TRUE FALSE 2506.674128 2270.871659 2442.907398 2526.150816 2401.763941 2645.246007 2481.902949 2621.97417 2129.416058 2474.463218 1.013017332 0.91772294 0.987247408 1.020888408 0.970620183 1.069018116 1.003006604 1.059613314 0.860556763 1 11.27289988 -4.411417094 22.31875176 0.991386928 7.662019186 0.012868604 0.058951072 5287.982418 1058191.405 0.01377366 1128.088259 3.88E-05 4.411417094 6.670632258 IIYGGS(ph)VTGATCK ddPTM_A459_MK2206_30min_R2 1 IIYGGSVTGATCK 13 0 P60174;P60174-3;P60174-4 P60174 TPI1 Triosephosphate isomerase 1 IIY(0.012)GGS(0.968)VT(0.02)GATCK 158.31 0.00036465 15633000 36157 39373 40093 47393 46770 38359 48929 38572 27892 35176 TRUE FALSE 38925.20772 37417.79407 41429.68061 43520.8403 44933.5748 39818.77862 42504.56353 43613.49284 30317.99574 34028.21 1.143909942 1.099611001 1.217509843 1.278963551 1.320480119 1.170169651 1.249097837 1.281686367 0.890966517 1 15.05444364 -8.262260077 24.99953559 0.945483233 1.220670567 0.720031782 0.068515086 40.62062151 1237250.36 0.059063446 0.018694515 5.47E-09 8.262260077 0.275187334 IIYGGSVT(ph)GATCK ddPTM_A459_MK2206_30min_R1 1 IIYGGSVTGATCK 13 0 P60174;P60174-3;P60174-4 P60174 TPI1 Triosephosphate isomerase 1 IIYGGS(0.169)VT(0.822)GAT(0.009)CK 160.18 0.00085138 19635000 4640.3 4566.2 4688.9 4298.4 4695.5 4346.8 4883 5254.4 4453.7 4158.5 TRUE FALSE 4245.618118 4268.93955 4370.630532 4629.463513 4508.468292 4592.91206 4557.26398 5208.461335 4916.678053 4673.686375 0.908408861 0.913398805 0.935157001 0.990537905 0.9646493 0.982717215 0.975089814 1.114422517 1.051991438 1 12.19034521 -6.597416714 0.616052264 1.054083838 0.908720335 0.620614671 0.036683493 0.560766765 0.468508492 0.029477615 0.038839297 2.53E-07 6.597416714 -0.145363503 IIYGGSVT(ph)GATCK ddPTM_A459_MK2206_30min_R2 1 IIYGGSVTGATCK 13 0 P60174;P60174-3;P60174-4 P60174 TPI1 Triosephosphate isomerase 1 IIYGGS(0.14)VT(0.86)GATCK 123.26 0.00582 16629000 26944 31887 24234 31472 26110 26150 34650 25287 23076 21326 TRUE FALSE 29006.85336 30303.53795 25041.94946 28900.63693 25084.79021 27145.15657 30100.41338 28592.09772 25083.10877 20630.13437 1.406042871 1.46889678 1.21385295 1.400894265 1.21592956 1.315801249 1.459050767 1.385938512 1.215848056 1 14.3324656 -8.57598005 3.157242651 1.000525757 1.355038058 0.635279573 0.084068136 0.184101309 4.793167127 0.082910774 0.022009714 2.65E-09 8.57598005 0.354512301 IIYGGSVTGATCK ddPTM_A459_MK2206_30min_R2 1 IIYGGSVTGATCK 13 0 P60174;P60174-3;P60174-4 P60174 TPI1 Triosephosphate isomerase 0 133.42 0.018344 2377400 10061 13863 12526 14360 16669 12339 13221 11159 13069 12103 FALSE TRUE 10831.2779 13174.58358 12943.61059 13186.74206 16014.4913 12808.56929 11485.06682 12617.51961 14205.718 11708.0801 0.925111359 1.125255675 1.105528018 1.126294145 1.367815318 1.093993992 0.98095219 1.077676229 1.213326 1 13.5152169 -4.761423575 10.59980836 1.125811685 0.924517008 0.243752187 0.103333642 0.104732362 329.8341329 0.026753197 0.150735238 1.73E-05 4.761423575 -0.201294677 IKDNGDLVLS(ph)SPSNVTLPQVK ddPTM_A459_MK2206_30min_R2 1 IKDNGDLVLSSPSNVTLPQVK 21 1 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;P04150-12;P04150-13;P04150-11 P04150-3 NR3C1 Glucocorticoid receptor 1 IKDNGDLVLS(0.441)S(0.276)PS(0.276)NVT(0.008)LPQVK 110.53 5.97E-05 15909000 68521 80700 69184 84239 78708 65113 85296 57112 61507 81183 TRUE FALSE 73767.02044 76692.55535 71490.56003 77356.40423 75617.52844 67590.92084 74096.53274 64576.73449 66856.76768 78534.00536 0.939300372 0.976552195 0.910313433 0.985005207 0.962863515 0.860658011 0.943496163 0.822277359 0.851309791 1 16.26102986 -6.751351435 24.98665035 0.887437343 0.955220845 0.247045108 0.050746217 255.8611983 633737.287 0.016222105 0.016040915 1.77E-07 6.751351435 0.067783502 IKDNGDLVLSSPS(ph)NVTLPQVK ddPTM_A459_MK2206_30min_R2 1 IKDNGDLVLSSPSNVTLPQVK 21 1 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;P04150-12;P04150-13;P04150-11 P04150-3 NR3C1 Glucocorticoid receptor 1 IKDNGDLVLS(0.164)S(0.164)PS(0.592)NVT(0.08)LPQVK 95.414 0.00022952 20333000 62357 59457 60596 68495 67629 54183 67480 49241 56398 68013 TRUE FALSE 67131.09986 56504.45184 62616.2404 62898.7394 64973.54565 56244.97203 58619.79494 55676.96777 61303.3961 65793.74138 1.02032653 0.858811958 0.951705118 0.955998824 0.987533834 0.85486812 0.890963087 0.846235016 0.931751179 1 16.00566273 -6.760611573 24.99999511 0.894290647 0.949424702 0.151774471 0.05584871 37.90587501 1144791.429 0.018208256 0.017208735 1.74E-07 6.760611573 0.055134055 IKDPDASKPEDWDER ddPTM_A459_MK2206_30min_R2 2 IKDPDASKPEDWDER 15 2 P27797;K7EJB9 P27797 CALR Calreticulin 0 ; 107.69 0.016837 19898000 115910 109824 107914 104375 108869 74870 130195 92852 90151 113857 FALSE TRUE 124784.1587 104370.2999 111511.7989 95847.22862 104594.256 77719.23031 113100.2401 104988.0752 97992.17102 110141.8554 1.132940409 0.947598889 1.012437992 0.870216216 0.949632232 0.705628483 1.026859768 0.953207796 0.889690578 1 16.74900329 IKDTCIQS(ph)PSKECQK ddPTM_A459_MK2206_30min_R2 1 IKDTCIQSPSKECQK 15 2 Q03188;Q03188-2 Q03188 CENPC Centromere protein C 1 IKDT(0.005)CIQS(0.925)PS(0.07)KECQK 50.178 0.048251 19544000 71439 75162 64874 75744 69306 47519 88794 69198 48773 83195 TRUE FALSE 76908.42477 71429.56438 67036.86678 69555.47291 66584.69821 49327.36884 77135.24114 78242.41619 53015.18738 80480.35396 0.955617377 0.887540385 0.832959393 0.864254063 0.827341021 0.612911927 0.95843566 0.972192744 0.658734521 1 16.29634903 -4.804168913 1.675006363 0.835270396 0.996025039 0.080175002 0.119428563 2.475588844 7.128107128 0.033047135 0.641651133 1.57E-05 4.804168913 0.160754644 IKEEVLS(ph)ESEAENQQAGAAALAPEIVIK ddPTM_A459_MK2206_30min_R1 2 IKEEVLSESEAENQQAGAAALAPEIVIK 28 1 Q9UJX5;Q9UJX5-3 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 1 IKEEVLS(0.547)ES(0.453)EAENQQAGAAALAPEIVIK;IKEEVLS(0.767)ES(0.233)EAENQQAGAAALAPEIVIK 107.58 5.27E-10 126547000 9758.6 10479.4 10744.5 8718.7 9520.5 8633.7 10003.2 9844.5 9229.6 8790.4 TRUE FALSE 8928.579826 9797.189155 10015.19328 9390.215785 9141.278325 9122.532633 9335.90478 9758.430574 10189.04995 9879.421116 0.903755364 0.991676439 1.013742927 0.950482389 0.925284814 0.923387365 0.944985002 0.987753276 1.031340787 1 13.27021079 -7.959329227 3.925817101 1.01485371 0.952662024 0.415921128 0.03137365 0.237691623 7.742226424 0.021883925 0.009137202 1.10E-08 7.959329227 -0.062191686 IKEEVLS(ph)ESEAENQQAGAAALAPEIVIK ddPTM_A459_MK2206_30min_R2 4 IKEEVLSESEAENQQAGAAALAPEIVIK 28 1 Q9UJX5;Q9UJX5-3 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 1 IKEEVLS(0.5)ES(0.5)EAENQQAGAAALAPEIVIK;IKEEVLS(0.647)ES(0.353)EAENQQAGAAALAPEIVIK;IKEEVLS(0.903)ES(0.097)EAENQQAGAAALAPEIVIK;IKEEVLS(0.722)ES(0.278)EAENQQAGAAALAPEIVIK 88.454 5.68E-05 17184100 114587.7 139648.3 127000.4 142000.9 146855.6 119208 153941.4 115598.2 113517.7 133001.5 TRUE FALSE 123360.6224 132713.5685 131234.5299 130398.9722 141089.3113 123744.544 133728.7093 130707.2816 123391.2644 128661.6719 0.958798534 1.031492646 1.019997082 1.013502858 1.09659162 0.961782496 1.039382648 1.015899138 0.959036693 1 16.97322282 -9.774854514 9.21466407 0.999989557 1.013767636 0.001195711 0.040734592 0 0 0.037883234 0.009188034 1.68E-10 9.774854514 0.01377808 IKEEVLSES(ph)EAENQQAGAAALAPEIVIK ddPTM_A459_MK2206_30min_R2 1 IKEEVLSESEAENQQAGAAALAPEIVIK 28 1 Q9UJX5;Q9UJX5-3 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 1 IKEEVLS(0.45)ES(0.55)EAENQQAGAAALAPEIVIK 51.632 0.011309 1971600 4167.2 4588.8 3719.1 4597.6 4471.3 5230.9 5072.7 4335 4481.8 4650.8 TRUE FALSE 4486.244036 4360.926865 3843.092938 4221.961373 4295.734296 5429.965565 4406.648397 4901.599384 4871.618863 4499.044777 0.997154787 0.969300614 0.854201976 0.938412837 0.954810301 1.206915209 0.979463112 1.089475573 1.08281182 1 12.13540301 -6.555908573 24.92749872 1.072592394 0.937120969 0.487341583 0.066250761 150.8071213 113812.631 0.021243971 0.02124409 2.78E-07 6.555908573 -0.135471425 IKGEHPGLSIGDVAK ddPTM_A459_MK2206_30min_R1 1 IKGEHPGLSIGDVAK 15 1 Q5T7C4;P09429;B2RPK0 Q5T7C4 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 0 72.898 0.035586 12669000 7331.9 6476.7 7419.6 5922.6 7574.6 6939.3 7148.8 6428.5 5616.6 4623.8 FALSE TRUE 6708.283404 6055.065653 6915.978224 6378.759678 7272.887643 7332.197169 6671.916596 6372.296302 6200.465669 5196.631252 1.290890786 1.165190555 1.33085799 1.227479759 1.399538911 1.410951983 1.283892636 1.226235997 1.193170223 1 12.34336098 -8.61611822 1.259491072 1.002390854 1.300497274 0.628435092 0.06991133 0.401338376 1.35555602 0.071874156 0.021995112 2.42E-09 8.61611822 0.29810642 IKGEHPGLSIGDVAK ddPTM_A459_MK2206_30min_R2 1 IKGEHPGLSIGDVAK 15 1 Q5T7C4;P09429;B2RPK0 Q5T7C4 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 0 79.652 0.024432 6173000 57680 70114 63528 78658 67940 65057 76152 66085 58508 65235 FALSE TRUE 62096.02515 66632.24072 65645.99181 72231.38979 65272.33423 67532.78972 66153.15093 74722.5364 63596.92008 63106.38729 0.983989542 1.055871578 1.040243225 1.14459713 1.034322151 1.070141908 1.048279798 1.184072478 1.007773108 1 15.94549841 -4.490165484 1.49892081 1.07421917 0.883751735 0.155907282 0.055023967 3.986752694 4.786278876 0.01466076 1.391360113 3.23E-05 4.490165484 -0.190467435 IKGS(ph)SPGIQDTLEAEDGAFETDEAPEDR ddPTM_A459_MK2206_30min_R1 4 IKGSSPGIQDTLEAEDGAFETDEAPEDR 28 1 Q9UNX4 Q9UNX4 WDR3 WD repeat-containing protein 3 1 IKGS(0.499)S(0.499)PGIQDT(0.001)LEAEDGAFETDEAPEDR;IKGS(0.499)S(0.499)PGIQDT(0.002)LEAEDGAFETDEAPEDR;IKGS(0.5)S(0.5)PGIQDTLEAEDGAFETDEAPEDR;IKGS(0.493)S(0.493)PGIQDT(0.013)LEAEDGAFETDEAPEDR 146.37 3.09E-14 76101900 5404.28 5187.8 4171.17 4273.33 5487.65 4497.27 4996.07 4664.39 4185.74 3764.94 TRUE FALSE 4944.617607 4850.073277 3888.042602 4602.462617 5269.06528 4751.901541 4662.791286 4623.60973 4620.862652 4231.369191 1.168562086 1.146218413 0.918861585 1.087700555 1.245238844 1.123017474 1.101958037 1.092698255 1.092049037 1 12.04690885 -11.151687 3.818916967 0.995901535 1.107194295 0.147940824 0.078045952 0.002989251 0.000290549 0.082943997 0.019400681 7.05E-12 11.151687 0.11129276 IKGS(ph)SPGIQDTLEAEDGAFETDEAPEDR ddPTM_A459_MK2206_30min_R2 5 IKGSSPGIQDTLEAEDGAFETDEAPEDR 28 1 Q9UNX4 Q9UNX4 WDR3 WD repeat-containing protein 3 1 IKGS(0.5)S(0.5)PGIQDT(0.001)LEAEDGAFETDEAPEDR;IKGS(0.5)S(0.5)PGIQDTLEAEDGAFETDEAPEDR;IKGS(0.402)S(0.402)PGIQDT(0.197)LEAEDGAFETDEAPEDR;IKGS(0.499)S(0.499)PGIQDT(0.001)LEAEDGAFETDEAPEDR;IKGS(0.499)S(0.499)PGIQDT(0.003)LEAEDGAFETDEAPEDR 133.53 1.45E-12 16015300 75527.7 100837.8 91387.4 97780.2 97205.2 90869 105712.6 79996.2 86119 102367.8 TRUE FALSE 81310.15878 95830.34148 94434.2103 89791.24488 93388.43543 94327.08347 91832.40864 90451.97801 93609.47495 99027.54707 0.821086265 0.967713978 0.953615566 0.906729971 0.943055121 0.952533777 0.927342051 0.913402186 0.945287223 1 16.59554228 -11.52447177 0.009474423 1.965641627 8.95E-07 0.310560701 0.037487614 11860.18359 15.54078656 1741.85796 1489.857875 2.99E-12 11.52447177 -1.965640731 IKNENTEGS(ph)PQEDGVELEGLK ddPTM_A459_MK2206_30min_R1 8 IKNENTEGSPQEDGVELEGLK 21 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 IKNENT(0.002)EGS(0.998)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK;IKNENT(0.008)EGS(0.992)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK;IKNENT(0.002)EGS(0.998)PQEDGVELEGLK 169.1 1.44E-10 774909100 46806.9 50124.8 47239.6 47349.6 36362.7 37141 38090.8 39039 40151.4 37682 TRUE FALSE 42825.72736 46861.66641 44033.10757 50996.4744 34914.29666 39243.89132 35549.83223 38697.68614 44325.28171 42350.33064 1.011225337 1.106524216 1.039734682 1.204157645 0.824416153 0.926648995 0.839422779 0.913751689 1.046633664 1 15.37008561 -6.266340848 24.99980159 0.916622166 1.087941752 0.518329899 0.077772821 323.1538785 1648234.754 0.023480702 0.027478539 5.42E-07 6.266340848 0.171319586 IKNENTEGS(ph)PQEDGVELEGLK ddPTM_A459_MK2206_30min_R2 7 IKNENTEGSPQEDGVELEGLK 21 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 IKNENTEGS(1)PQEDGVELEGLK;IKNENT(0.001)EGS(0.999)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK;IKNENT(0.002)EGS(0.998)PQEDGVELEGLK;IKNENT(0.016)EGS(0.984)PQEDGVELEGLK;IKNENT(0.001)EGS(0.999)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK 125.91 3.70E-05 360549400 676170 769030 729069 837560 743816 564908.7 951397 705970 510309.3 821476 TRUE FALSE 727938.0951 730841.0885 753375.7966 769128.6688 714610.0465 586406.6964 826477.4311 798242.703 554695.0805 794671.3054 0.916024135 0.919677209 0.948034478 0.967857608 0.89925236 0.737923582 1.040024253 1.004494182 0.698018258 1 19.59999873 -6.382613681 9.117193128 0.895862962 0.937238203 0.03608887 0.104561106 1.504324568 106.0321483 0.032676877 0.037043808 4.14E-07 6.382613681 0.041375241 IKPNLSSS(ph)PR ddPTM_A459_MK2206_30min_R2 2 IKPNLSSSPR 10 1 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 IKPNLS(0.001)S(0.051)S(0.947)PR;IKPNLS(0.008)S(0.232)S(0.76)PR 72.731 0.037011 121457000 532810 615950 581950 661440 564760 538140 683550 530390 468480 533590 TRUE FALSE 573602.3433 585362.8187 601351.9225 607398.2362 542584.6847 558619.2948 593799.0639 599713.7941 509227.5436 516179.002 1.111246953 1.134030668 1.165006558 1.176720157 1.051156058 1.082220107 1.150374311 1.161832992 0.986532853 1 18.97751193 -8.268357745 24.93303346 0.993266398 1.12857571 0.681512199 0.037134474 351.7559113 1267670.984 0.03586547 0.010102494 5.39E-09 8.268357745 0.135309312 IKPVTENLVLSSHTGFCQS(ph)SGDEALSK ddPTM_A459_MK2206_30min_R2 1 IKPVTENLVLSSHTGFCQSSGDEALSK 27 1 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 IKPVTENLVLSSHTGFCQS(0.541)S(0.434)GDEALS(0.025)K 70.632 0.00025976 5020800 14699 21776 18672 30166 27853 23920 26748 18044 21090 21958 TRUE FALSE 15824.36674 20694.63551 19294.51516 27701.3413 26759.35127 24830.29236 23235.95547 20402.41275 22924.37008 21241.51226 0.744973642 0.97425434 0.908339996 1.304113425 1.259766769 1.168951253 1.093893654 0.960497186 1.079224953 1 14.37459886 -5.143156418 1.618112869 1.121772856 0.760397364 0.477780104 0.115365718 0.511479741 2.045915491 0.036164659 0.233589094 7.19E-06 5.143156418 -0.361375492 IKQS(ph)SQDNELK ddPTM_A459_MK2206_30min_R1 1 IKQSSQDNELK 11 1 Q13427;E9PG73 Q13427 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IKQS(0.97)S(0.03)QDNELK 174.72 0.00054969 9951200 1879.9 1985.5 2377.7 2033.4 1611.7 1534.7 1406.4 2073.2 1634.5 1469 TRUE FALSE 1720.004633 1856.243589 2216.308349 2190.01282 1547.502576 1621.593388 1312.581622 2055.074231 1804.412124 1650.99081 1.041801458 1.12432097 1.342411075 1.326483955 0.937317498 0.982194073 0.795026607 1.244752071 1.092926813 1 10.68911637 -6.268844971 24.94131635 1.008931195 1.212270317 0.346418079 0.134581276 689.2600736 2321357.761 0.044714426 0.051724915 5.38E-07 6.268844971 0.203339122 IKQSS(ph)QDNELK ddPTM_A459_MK2206_30min_R1 1 IKQSSQDNELK 11 1 Q13427;E9PG73 Q13427 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IKQS(0.174)S(0.826)QDNELK 148.89 0.0030422 7052900 1911.3 2228.9 2550.3 1792.4 1716 1612.5 1528.9 1890.3 1548.3 1511.5 TRUE FALSE 1748.733898 2083.798205 2377.192742 1930.450959 1647.648086 1703.798357 1426.909871 1873.773306 1709.251326 1698.756031 1.029420274 1.226661255 1.399372657 1.136390937 0.969914488 1.002968246 0.839973395 1.103026728 1.006178223 1 10.73026296 -6.108505898 4.204216048 0.986509723 1.225750917 0.51028461 0.10297974 0.187345839 5.615901227 0.031771541 0.042292667 7.79E-07 6.108505898 0.239241194 IKS(ph)LEEIYLFSLPIK ddPTM_A459_MK2206_30min_R1 1 IKSLEEIYLFSLPIK 15 1 P15880;H0YEN5;E9PQD7;E9PMM9;E9PPT0;H3BNG3;H0YE27 P15880 RPS2 40S ribosomal protein S2 1 IKS(1)LEEIYLFSLPIK 91.637 0.0078804 1200300 985.03 1022.6 1319 987.14 885.94 837.86 906.91 1106.6 1205.5 873.36 TRUE FALSE 901.2480259 956.0285541 1229.469955 1063.169694 850.6511338 885.2989091 846.4116887 1096.925113 1330.816039 981.5584303 0.91818072 0.973990467 1.252569299 1.08314458 0.866633211 0.90193195 0.862314114 1.117534198 1.355819478 1 9.938930341 -7.990353439 22.07709372 1.197498765 0.986943106 0.267169574 0.136386582 60.07723742 137492.5239 0.078848127 0.037750683 1.02E-08 7.990353439 -0.210555659 IKTEPS(ph)SPLSDPSDIIR ddPTM_A459_MK2206_30min_R2 1 IKTEPSSPLSDPSDIIR 17 1 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 IKTEPS(0.479)S(0.479)PLS(0.009)DPS(0.034)DIIR 132.97 0.0031624 4797900 10875 20984 12103 20776 26472 23208 28529 18722 25765 21740 TRUE FALSE 11707.59836 19941.96507 12506.50798 19078.53434 25432.57627 24091.1967 24783.10803 21169.02968 28005.99313 21030.62558 0.556692825 0.948234516 0.59468074 0.907178641 1.209311448 1.145529248 1.178429426 1.006581074 1.331676655 1 14.36020414 -6.047497627 3.985463074 1.145220366 0.725087102 0.69294786 0.13316248 0.121594715 4.029556178 0.037092498 0.051219322 8.96E-07 6.047497627 -0.420133264 IKTEPSSPLS(ph)DPSDIIR ddPTM_A459_MK2206_30min_R2 1 IKTEPSSPLSDPSDIIR 17 1 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 IKTEPS(0.189)S(0.197)PLS(0.552)DPS(0.062)DIIR 107.09 0.001365 13169000 21389 43589 32698 33891 47427 41640 42112 31039 33572 31623 TRUE FALSE 23026.55829 41424.43364 33788.135 31121.99689 45564.77768 43224.63938 36582.64381 35095.90387 36492.03188 30591.1441 0.752719748 1.354131559 1.104507072 1.017353152 1.489476089 1.412978842 1.195857327 1.147256989 1.192895295 1 14.90082644 -4.751401097 24.98494644 1.22221245 0.752718785 0.44385783 0.154141839 399.8447706 995132.0151 0.039588535 0.523580486 1.77E-05 4.751401097 -0.469493665 IKVEPVALAPS(ph)PVIPR ddPTM_A459_MK2206_30min_R2 2 IKVEPVALAPSPVIPR 16 1 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 IKVEPVALAPS(1)PVIPR;IKVEPVALAPS(1)PVIPR 128.66 0.00051424 10900500 91679 107929 94128 115558 106854 94240 104283 91201 86698 94495 TRUE FALSE 98698.01473 102569.4028 97266.18054 106116.5417 102658.3751 97826.36924 90590.51683 103121.2838 94238.83533 91411.63589 1.079709533 1.122060685 1.064045946 1.160864705 1.123034 1.070174145 0.991017346 1.128098002 1.030928223 1 16.4800902 -6.934007943 5.224567493 1.045864939 1.110391583 0.386780605 0.042503647 0.233244361 12.25298907 0.015009951 0.013114826 1.16E-07 6.934007943 0.064526644 IKWGDAGAEYVVESTGVFTTMEK ddPTM_A459_MK2206_30min_R1 2 IKWGDAGAEYVVESTGVFTTMEK 23 1 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 156.7 5.47E-09 24006500 9984.8 11353.7 11581.5 11072.7 12779.4 10075.4 9508.1 10934.9 7001.7 4975.4 FALSE TRUE 9135.540328 10614.57207 10795.38005 11925.52127 12270.36944 10645.86044 8873.831998 10839.29732 7729.551771 5591.790114 1.633741636 1.898242217 1.930576761 2.132683994 2.194354435 1.90383763 1.586939391 1.938430646 1.38230363 1 12.4490945 -8.522042624 0.981210378 0.992217174 1.947235267 0.723848488 0.1816165 0.32434704 0.688183582 0.1826671 0.061329039 3.01E-09 8.522042624 0.955018093 ILAHNNFVGR ddPTM_A459_MK2206_30min_R2 1 ILAHNNFVGR 10 0 O00425;Q9NZI8;Q9NZI8-2 O00425;Q9NZI8 IGF2BP3;IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 3;Insulin-like growth factor 2 mRNA-binding protein 1 0 150.36 0.0010018 2489300 16203 16387 16357 15953 16162 16905 20413 11633 17481 15037 FALSE TRUE 17443.51414 15573.24541 16902.33422 14649.58887 15527.39867 17548.33162 17732.74858 13153.47304 19001.46578 14546.34392 1.199168274 1.070595161 1.16196443 1.007097656 1.06744339 1.206374036 1.219051926 0.904245982 1.306270901 1 13.82836897 -12.04888092 1.753997992 0.000100512 1.119511988 0.101058321 0.1116065 2120526.821 131448.2022 8406133.197 0.027008274 8.94E-13 12.04888092 1.119411476 ILAT(ph)PPQEDAPSVDIANIR ddPTM_A459_MK2206_30min_R1 2 ILATPPQEDAPSVDIANIR 19 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 1 ILAT(1)PPQEDAPSVDIANIR;ILAT(1)PPQEDAPSVDIANIR 228.32 3.63E-23 45933100 9506.4 10387.6 10152.5 8238.4 11886.4 10400.5 11218.6 9472 9434.6 8949.2 TRUE FALSE 8697.83076 9711.365352 9463.376586 8872.922995 11412.93952 10989.36732 10470.22766 9389.187303 10415.36043 10057.89446 0.864776499 0.965546556 0.940890424 0.882184938 1.134724526 1.092611119 1.040995976 0.9335142 1.035540836 1 13.2960407 -6.242755968 24.99271737 1.038964069 0.919045155 0.546277816 0.056254031 736.1483021 984742.6926 0.017918135 0.023090375 5.72E-07 6.242755968 -0.119918914 ILAT(ph)PPQEDAPSVDIANIR ddPTM_A459_MK2206_30min_R2 2 ILATPPQEDAPSVDIANIR 19 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 1 ILAT(1)PPQEDAPSVDIANIR;ILAT(1)PPQEDAPSVDIANIR 188.71 6.22E-15 16280000 113958 145786 126544 129971 122725 143608 133325 115356 115859 126830 TRUE FALSE 122682.7121 138546.4792 130762.9138 119351.9535 117906.1999 149073.1031 115819.2673 130433.4253 125936.2064 122691.5475 0.999927987 1.12922595 1.065785838 0.97278057 0.960996925 1.215023415 0.943987338 1.063100335 1.02644566 1 16.90467634 -14.52287849 0.123859864 0.852933181 1.06392706 0.027364087 0.078346846 700.1096285 5.54361131 25.52652541 0.685242458 3.00E-15 14.52287849 0.210993879 ILATDVSS(ph)KNTPDSK ddPTM_A459_MK2206_30min_R1 1 ILATDVSSKNTPDSK 15 1 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 ILAT(0.026)DVS(0.028)S(0.654)KNT(0.236)PDS(0.055)K 82.925 0.013452 9899200 2550.6 3061 2543.4 2756 2355.4 1913.4 2018.8 2678.3 2273.2 1230.3 TRUE FALSE 2333.658076 2861.728344 2370.761094 2968.267598 2261.57943 2021.735054 1884.129536 2654.883905 2509.507275 1382.718852 1.687731438 2.069638625 1.714564816 2.146689179 1.635603237 1.462144709 1.362626634 1.920046075 1.814907832 1 10.43329213 -6.459467733 8.582579724 1.558807785 1.902260775 0.315342397 0.269297487 0.517138214 66.05700122 0.082431563 0.093227416 3.47E-07 6.459467733 0.343452991 ILATPPQEDAPS(ph)VDIANIR ddPTM_A459_MK2206_30min_R1 1 ILATPPQEDAPSVDIANIR 19 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 1 ILATPPQEDAPS(1)VDIANIR 102.92 0.00069212 2435100 1160.7 1217.1 1475 1085.3 1067.5 1166.6 1568.1 1024.7 1027.1 1073.2 TRUE FALSE 1061.97637 1137.866569 1374.88111 1168.889994 1024.979215 1232.651884 1463.49491 1015.741156 1133.870721 1206.156118 0.880463444 0.943382495 1.139886528 0.969103399 0.84978984 1.021967111 1.213354464 0.84213075 0.940069617 1 10.23620094 ILATPPQEDAPS(ph)VDIANIR ddPTM_A459_MK2206_30min_R2 1 ILATPPQEDAPSVDIANIR 19 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 1 ILATPPQEDAPS(1)VDIANIR 142.55 8.81E-05 10939000 49527 63964 46343 68037 65700 68008 67255 46901 48817 52503 TRUE FALSE 53318.8252 60787.64077 47888.05249 62478.15946 63120.28788 70596.0921 58424.33771 53031.12174 53063.01442 50789.83141 1.049793309 1.196846674 0.942866931 1.230131263 1.242774117 1.38996508 1.150315646 1.044128722 1.044756656 1 15.63225206 -7.739855849 4.544517831 1.030765437 1.178581595 0.254799682 0.111954031 0.301173373 14.78568514 0.06360663 0.032904368 1.82E-08 7.739855849 0.147816159 ILATPPQEDAPSVDIANIR ddPTM_A459_MK2206_30min_R1 1 ILATPPQEDAPSVDIANIR 19 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 0 197.06 4.13E-14 6851300 1942.3 1656.4 1710.4 1699.3 1989.1 1776.2 1602.3 1843.3 1702.2 1381.2 FALSE TRUE 1777.097186 1548.568059 1594.302813 1830.18038 1909.869935 1876.766909 1495.413491 1827.184222 1879.149781 1552.313484 1.144805611 0.997587198 1.027049517 1.179001793 1.230337786 1.209012824 0.963345037 1.177071669 1.21054787 1 10.60020422 -5.757701455 24.96432652 1.145321596 1.050591406 0.139877394 0.091736058 167.6677765 1119772.45 0.02555796 0.042183578 1.75E-06 5.757701455 -0.09473019 ILATPPQEDAPSVDIANIR ddPTM_A459_MK2206_30min_R2 2 ILATPPQEDAPSVDIANIR 19 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 0 ; 156.6 4.35E-05 7786400 37922 50373 42812 50718 51774 51639 48542 34289 44018 43050 FALSE TRUE 40825.33748 47871.55007 44239.33071 46574.17716 49741.09262 53604.15833 42168.37709 38770.69003 47846.60607 41645.28203 0.980311226 1.149507165 1.062289137 1.118354226 1.194399226 1.287160411 1.012560728 0.930974366 1.148908202 1 15.34586544 ILDEIEEHNIK ddPTM_A459_MK2206_30min_R1 1 ILDEIEEHNIK 11 0 B5MCX3;Q15019;Q15019-3;Q15019-2;C9J2Q4;H7C2Y0 B5MCX3 Sep-02 Septin-2 0 88.338 0.043256 3074900 3046.3 3264.9 3159.9 2878.4 3263.1 2793.7 2954.1 2803.9 3000.5 2791.7 FALSE TRUE 2787.196188 3052.354417 2945.414792 3100.094867 3133.123817 2951.87688 2757.037379 2779.385798 3312.412712 3137.556872 0.88833328 0.972844331 0.938760606 0.988060135 0.9985871 0.940820199 0.878721085 0.885843958 1.055729935 1 11.61542589 -8.272052449 24.98352151 1.027864974 0.939790184 0.428180009 0.042097652 850.8904588 2003002.199 0.042073261 0.011307036 5.34E-09 8.272052449 -0.08807479 ILDEIEEHNIK ddPTM_A459_MK2206_30min_R2 3 ILDEIEEHNIK 11 0 B5MCX3;Q15019;Q15019-3;Q15019-2;C9J2Q4;H7C2Y0 B5MCX3 Sep-02 Septin-2 0 ;; 145.23 0.00099131 4613740 21526.4 31142.6 31186.5 26328.9 28212.4 25521.3 29422 22484.1 27777.6 26272 FALSE TRUE 23174.47773 29596.10377 32226.24234 24177.74465 27104.63942 26492.53096 25558.85606 25422.84907 30193.64544 25414.74679 0.911851608 1.164524833 1.268013512 0.951327387 1.066492601 1.042407826 1.005670301 1.000318802 1.188036445 1 14.63337824 -5.795811917 24.99985255 1.036568799 1.119770406 0.111989548 0.100972001 375.4873344 273098.0906 0.028330802 0.042023553 1.60E-06 5.795811917 0.083201607 ILDLIESGK ddPTM_A459_MK2206_30min_R2 1 ILDLIESGK 9 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 141.48 0.030512 4351800 62526 58322 53108 59856 49152 41854 60568 58826 42599 60808 FALSE TRUE 67313.03863 55425.81429 54878.59421 54965.57333 47222.04551 43446.7833 52615.34884 66514.76018 46304.18402 58823.83994 1.144315616 0.942233869 0.932931177 0.934409814 0.802770536 0.738591417 0.894456209 1.130744954 0.787166973 1 15.84411334 -3.968044038 1.251859295 0.895677168 2.382594796 0.313923611 0.106651384 11.93592435 3.56523468 0.032580635 37.37640598 0.000107636 3.968044038 1.486917629 ILDPEGLALGAVIAS(ph)SKK ddPTM_A459_MK2206_30min_R1 1 ILDPEGLALGAVIASSKK 18 1 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 ILDPEGLALGAVIAS(0.859)S(0.141)KK 117.23 0.00052547 7449100 2607.7 2821.5 2822.7 2301.7 2031.8 2171.2 2282.2 2273.8 2074 2039 TRUE FALSE 2385.901421 2637.819837 2631.102988 2478.977333 1950.869104 2294.131468 2129.958602 2253.920406 2289.599722 2291.606714 1.041147858 1.15107877 1.148147705 1.081763864 0.851310608 1.00110174 0.929460797 0.983554636 0.999124199 1 11.16214375 -6.06722541 8.019869184 0.960556714 1.116926335 0.662316052 0.050999255 0.178610165 19.59770591 0.014577109 0.018920561 8.57E-07 6.06722541 0.156369621 ILDPNTGEPAPVLSSPPPADVST(ph)FLAFPSPEK ddPTM_A459_MK2206_30min_R1 1 ILDPNTGEPAPVLSSPPPADVSTFLAFPSPEK 32 0 P46060 P46060 RANGAP1 Ran GTPase-activating protein 1 1 ILDPNT(0.001)GEPAPVLS(0.007)S(0.015)PPPADVS(0.359)T(0.422)FLAFPS(0.197)PEK 47.366 0.023534 22991000 3179.6 3520.5 3187.5 3033.6 3171.9 2681 3296.7 2585.8 3037.8 2800.2 TRUE FALSE 2909.158323 3291.31481 2971.141381 3267.248398 3045.556506 2832.795903 3076.783158 2563.192623 3353.590181 3147.109916 0.924390441 1.045821372 0.944085672 1.038174225 0.967731216 0.900126141 0.977653542 0.814459199 1.065609486 1 11.61981185 -6.525598694 24.81627781 0.940750841 0.990826728 0.045022762 0.070658758 179.6375013 1638948.441 0.021526558 0.021654935 2.98E-07 6.525598694 0.050075887 ILDQMPATPS(ph)SPMYVD ddPTM_A459_MK2206_30min_R1 1 ILDQMPATPSSPMYVD 16 0 P45985;P45985-2 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 1 ILDQMPAT(0.048)PS(0.585)S(0.367)PMYVD 79.346 0.02482 6978100 4094.2 4675.1 4271.9 4285.3 4501.4 4460.6 4122.7 3318.7 4026.6 3207.1 TRUE FALSE 3745.96679 4370.75014 3981.93533 4615.354549 4322.099706 4713.155317 3847.682205 3289.684956 4445.179479 3604.41976 1.039270407 1.212608528 1.104736849 1.280470882 1.19911109 1.30760445 1.067490043 0.912680868 1.233257993 1 11.81555132 -7.492322889 22.40847216 1.041798827 1.191809609 0.296323415 0.103769094 218.8729253 160513.5674 0.04196872 0.028230398 3.22E-08 7.492322889 0.150010782 ILDSVGIEADDDR ddPTM_A459_MK2206_30min_R1 1 ILDSVGIEADDDR 13 0 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 0 129 0.024509 1554000 1487.2 1214.8 1249.6 1193.2 1860.1 1828 1562.2 1693.8 720.58 892.23 FALSE TRUE 1360.70583 1135.716299 1164.780634 1285.100471 1786.008278 1931.49978 1457.988488 1678.991285 795.4868696 1002.766188 1.356952245 1.13258336 1.161567519 1.281555447 1.781081471 1.926171627 1.453966543 1.674359691 0.793292473 1 9.969769541 -6.021175863 23.11958436 1.500170515 1.2107512 0.07002216 0.32750812 578.5749422 631683.4323 0.096526997 0.126210255 9.52E-07 6.021175863 -0.289419315 ILDSVGIEADDDR ddPTM_A459_MK2206_30min_R2 4 ILDSVGIEADDDR 13 0 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 0 ;;; 231.07 5.15E-12 35771000 102641 98397 89085 102573 89367 100455 118555 88075 82347 106702 FALSE TRUE 110499.2739 93510.74806 92055.04944 94192.45779 85858.00255 104277.8854 102988.5861 99586.70491 89509.39321 103220.3225 1.070518588 0.9059335 0.891830671 0.912537914 0.83179359 1.010245685 0.997754934 0.96479746 0.867168316 1 16.65536752 ILDSVGIEADDDRLNK ddPTM_A459_MK2206_30min_R1 4 ILDSVGIEADDDRLNK 16 1 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 0 ;;; 189.09 2.66E-06 106407900 10979.7 11545.3 11832.3 10604.8 11442.8 10502.4 10842.3 11226.1 9786.7 9100.6 FALSE TRUE 10045.81886 10793.69887 11029.15644 11421.58353 10987.00905 11097.03681 10119.02995 11127.95139 10804.06249 10228.05103 0.982183099 1.05530358 1.078324346 1.116692075 1.074203581 1.084961033 0.989340972 1.087983562 1.056316834 1 13.32024364 -9.947808315 14.07668718 1.000000178 1.060668717 0.156529868 0.040330027 0 0 0.039779986 0.009648064 1.13E-10 9.947808315 0.060668539 ILDSVGIEADDDRLNK ddPTM_A459_MK2206_30min_R2 2 ILDSVGIEADDDRLNK 16 1 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 0 ; 214.58 3.19E-08 55881000 100386 132669 128721 134095 127214 113913 144342 110850 115779 130130 FALSE TRUE 108071.6293 126080.8504 133012.4939 123139.0096 122218.9392 118248.039 125389.722 125338.4756 125849.2481 125883.8688 0.858502606 1.001564788 1.056628583 0.978195306 0.970886424 0.93934227 0.996074582 0.99566749 0.99972498 1 16.9417339 -4.75900044 24.92888499 0.992220254 0.858502424 0.675617936 0.027977228 41.42546222 423323.8975 0.007608047 0.049998906 1.74E-05 4.75900044 -0.13371783 ILEDHGS(ph)PAGEIDDEDKDKDETETVK ddPTM_A459_MK2206_30min_R1 2 ILEDHGSPAGEIDDEDKDKDETETVK 26 2 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;H0YBA1 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 ILEDHGS(1)PAGEIDDEDKDKDETETVK;ILEDHGS(1)PAGEIDDEDKDKDETETVK 56.46 0.0038254 13355900 2402.65 2894.3 2834.3 2826.5 2370.67 2047.9 2260.65 2374.7 2232.56 2254 TRUE FALSE 2198.292001 2705.880544 2641.915613 3044.19752 2276.241194 2163.850328 2109.846163 2353.938248 2464.642601 2533.242537 0.867777944 1.068149024 1.042898804 1.201699985 0.898548465 0.85418206 0.832863862 0.929219455 0.972920108 1 11.30676949 -6.386743326 19.90519172 0.903947706 1.047108994 0.33795911 0.088714192 3.992027741 618.5787957 0.027868803 0.031600192 4.10E-07 6.386743326 0.143161288 ILEDHGS(ph)PAGEIDDEDKDKDETETVK ddPTM_A459_MK2206_30min_R2 1 ILEDHGSPAGEIDDEDKDKDETETVK 26 2 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;H0YBA1 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 ILEDHGS(1)PAGEIDDEDKDKDETETVK 59.547 0.0025588 21390000 91997 68464 95482 56127 58107 28346 91613 68435 45549 115300 TRUE FALSE 99040.36105 65064.17732 98665.32222 51541.24456 55825.42722 29424.72689 79584.10305 77379.68947 49510.76969 111537.7704 0.887953566 0.583337618 0.884591128 0.46209678 0.500506931 0.263809531 0.713517069 0.693753239 0.44389241 1 16.76717281 -9.890825008 8.844488937 0.999999935 0.600058311 0.286217779 0.187661585 0 0 0.185077289 0.044887836 1.29E-10 9.890825008 -0.399941624 ILEGPQQSLSGS(ph)PLQPIPAS(ph)PPPQIPPGLRPR ddPTM_A459_MK2206_30min_R1 1 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 2 ILEGPQQS(0.009)LS(0.04)GS(0.952)PLQPIPAS(1)PPPQIPPGLRPR 75.512 3.47E-05 11453000 490.18 371.49 492.61 476.32 480.57 442.26 491.65 404.41 399.07 430.48 TRUE FALSE 448.487617 347.3059335 459.1730057 513.0062489 461.4278793 467.300379 458.8529256 400.874286 440.5547546 483.8111124 0.926989078 0.717854395 0.949074947 1.06034408 0.953735595 0.965873596 0.948413366 0.82857602 0.910592467 1 8.918300096 -5.332149977 14.51887543 0.95025762 0.822434503 0.335991474 0.072871406 2.739911064 561.4316128 0.019577951 0.040758095 4.65E-06 5.332149977 -0.127823117 ILEGPQQSLSGS(ph)PLQPIPAS(ph)PPPQIPPGLRPR ddPTM_A459_MK2206_30min_R2 4 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 2 ILEGPQQS(0.042)LS(0.102)GS(0.856)PLQPIPAS(1)PPPQIPPGLRPR;ILEGPQQS(0.031)LS(0.023)GS(0.948)PLQPIPAS(0.999)PPPQIPPGLRPR;ILEGPQQS(0.08)LS(0.082)GS(0.839)PLQPIPAS(1)PPPQIPPGLRPR;ILEGPQQS(0.074)LS(0.099)GS(0.826)PLQPIPAS(1)PPPQIPPGLRPR 85.123 2.92E-05 18985100 17705.3 26454.4 24430.4 25907 26473.8 20918.2 21864.8 19441 16417.1 17502.4 TRUE FALSE 19060.83138 25140.71296 25244.89734 23790.31523 25434.30559 21714.25676 18993.9255 21982.00545 17845.02968 16931.29812 1.125774955 1.484866239 1.491019599 1.405108755 1.50220647 1.28249214 1.121823345 1.298305971 1.053967012 1 14.04740497 -7.033621921 3.793014937 1.145483804 1.411480223 0.527241017 0.124912898 0.193709656 5.92529112 0.047876701 0.038234238 9.26E-08 7.033621921 0.265996418 ILEGPQQSLSGS(ph)PLQPIPASPPPQIPPGLRPR ddPTM_A459_MK2206_30min_R1 2 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 ILEGPQQS(0.02)LS(0.253)GS(0.726)PLQPIPAS(0.001)PPPQIPPGLRPR;ILEGPQQS(0.038)LS(0.262)GS(0.7)PLQPIPAS(0.001)PPPQIPPGLRPR 104.12 2.88E-10 117768000 1637.76 2323 1701.3 1532.86 1833.54 1989.82 1782.92 1598.09 1580.33 1837.4 TRUE FALSE 1498.459912 2171.772278 1585.820496 1650.921143 1760.506219 2102.481889 1663.98466 1584.118068 1744.610959 2065.030984 0.725635559 1.051689924 0.767940292 0.799465556 0.852532593 1.018135759 0.805791619 0.767115884 0.844835246 1 11.01194771 -6.540026054 24.93219527 0.875067257 0.844113832 0.039930134 0.108795306 1455.172701 2115806.683 0.036134583 0.03614115 2.88E-07 6.540026054 -0.030953425 ILEGPQQSLSGS(ph)PLQPIPASPPPQIPPGLRPR ddPTM_A459_MK2206_30min_R2 2 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 ILEGPQQS(0.159)LS(0.245)GS(0.594)PLQPIPAS(0.002)PPPQIPPGLRPR;ILEGPQQS(0.359)LS(0.269)GS(0.37)PLQPIPAS(0.002)PPPQIPPGLRPR 72.051 4.23E-05 110885000 61742 111198 75119 87314 85602 56483 82817 54612 67300 80489 TRUE FALSE 66469.01499 105676.069 77623.42997 80180.1669 82240.83536 58632.50014 71943.02842 61749.97591 73153.63235 77862.65052 0.853670079 1.357211298 0.99692766 1.02976416 1.056229589 0.753024714 0.923973535 0.793062855 0.939521476 1 16.24864384 -6.668252963 8.221064607 0.871934915 1.071692679 0.298949891 0.134365419 0.283346457 22.09279938 0.042222308 0.042164629 2.15E-07 6.668252963 0.199757763 ILEGPQQSLSGSPLQPIPAS(ph)PPPQIPPGLRPR ddPTM_A459_MK2206_30min_R1 2 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 ILEGPQQSLSGSPLQPIPAS(1)PPPQIPPGLRPR;ILEGPQQSLSGSPLQPIPAS(1)PPPQIPPGLRPR 135.13 4.34E-19 155134000 2050.99 2127.62 1990.95 1498.77 1954.11 2041.2 1961.51 1679.84 1542.16 1458.96 TRUE FALSE 1876.54253 1989.111551 1855.809861 1614.205525 1876.273661 2156.77098 1830.661247 1665.153336 1702.473051 1639.706979 1.144437728 1.213089641 1.131793598 0.984447554 1.144273754 1.315339269 1.116456336 1.015518844 1.038278834 1 10.67922231 -7.677525762 4.656381329 1.020040233 1.153519868 0.384805691 0.077488067 0.247659872 9.55693602 0.0423623 0.023191232 2.10E-08 7.677525762 0.133479635 ILEGPQQSLSGSPLQPIPAS(ph)PPPQIPPGLRPR ddPTM_A459_MK2206_30min_R2 2 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 ILEGPQQSLSGSPLQPIPAS(1)PPPQIPPGLRPR;ILEGPQQSLSGSPLQPIPAS(1)PPPQIPPGLRPR 82.339 2.27E-06 142262000 36759 42512 43365 43163 45929 33781 42521 39987 35945 36492 TRUE FALSE 39573.2973 40400.9159 44810.76746 39636.44483 44125.59669 35066.55963 36937.94162 45213.4382 39071.43113 35301.26903 1.12101628 1.144460724 1.269381206 1.122805098 1.249971967 0.993351247 1.046362996 1.280787899 1.106799619 1 15.10743243 -6.743447852 24.99778981 1.100565957 1.181086243 0.219557643 0.088291041 473.6726376 658129.0011 0.029971854 0.029912469 1.81E-07 6.743447852 0.080520285 ILELT(ph)PEPDRPR ddPTM_A459_MK2206_30min_R1 6 ILELTPEPDRPR 12 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR 155.39 0.00058901 211452400 17135.3 16365 15406.4 13444 18088.4 15612.9 16895.9 15110.2 13752.2 12785.8 TRUE FALSE 15677.85275 15299.63553 14360.65649 14479.45921 17367.90073 16496.88891 15768.80534 14978.09311 15181.7904 14369.80143 1.091027794 1.064707512 0.9993636 1.007631127 1.208638881 1.148024834 1.097357219 1.042331252 1.056506624 1 13.81075251 -3.80020384 4.682274585 1.07440638 41.53581932 0.00468655 0.064059887 23686.48426 288.94527 0.01695183 10310179.59 0.000158415 3.80020384 40.46141294 ILELT(ph)PEPDRPR ddPTM_A459_MK2206_30min_R2 5 ILELTPEPDRPR 12 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR 119.96 0.0057421 116764700 45329.8 56663.8 46476.4 61331.8 53822.1 57629 55168.9 46790.2 42676.6 46315.7 TRUE FALSE 48800.28434 53849.95809 48025.89998 56320.79575 51708.77392 59822.11198 47925.15716 52905.83979 46388.53353 44804.4225 1.089184541 1.201889347 1.071900882 1.257036529 1.154099775 1.335183195 1.06965238 1.180817358 1.035356131 1 15.45135352 -8.337895483 1.950001792 0.995173626 1.175588975 0.365766406 0.079720621 0.33438284 2.480001344 0.072178956 0.020780678 4.59E-09 8.337895483 0.18041535 ILENEKDLEEAEEYKEAR ddPTM_A459_MK2206_30min_R1 3 ILENEKDLEEAEEYKEAR 18 2 E5RIW3;E5RJD8;E5RHG6;O75347 E5RIW3 TBCA Tubulin-specific chaperone A 0 ;; 72.315 0.012709 18229500 7146.1 7349.8 7080.8 6521.3 6138.3 5264.25 5908.5 6732.3 5927.6 5278.06 FALSE TRUE 6538.286669 6871.326684 6600.175024 7023.571656 5893.798513 5562.307286 5514.354746 6673.440211 6543.795232 5931.94592 1.102216163 1.15835963 1.112649224 1.184024897 0.993569158 0.937686783 0.929603004 1.125000177 1.103144789 1 12.53428973 -6.268762839 24.73280503 1.01296508 1.138768472 0.492517657 0.061882829 465.0364109 1570520.308 0.02118979 0.024506228 5.39E-07 6.268762839 0.125803392 ILENSEDS(ph)SPECLF ddPTM_A459_MK2206_30min_R1 2 ILENSEDSSPECLF 14 0 A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9 A0A087WSW7 HELLS Lymphoid-specific helicase 1 ILENSEDS(0.974)S(0.026)PECLF;ILENS(0.001)EDS(0.854)S(0.145)PECLF 163.33 0.0002689 7168400 2754.4 2904.7 2334.6 2066.11 2722.3 2242.3 2176.7 2355 2201.5 1752.25 TRUE FALSE 2520.123816 2715.603502 2176.133857 2225.24215 2613.865026 2369.257088 2031.496315 2334.410483 2430.353803 1969.331959 1.279684618 1.378946546 1.105011193 1.129947717 1.327285131 1.203076545 1.031566215 1.185381912 1.234100626 1 10.9434906 -1.522915746 0.023028245 5.01E-07 2.771950354 0.358741602 0.093625789 2808.125328 4.995675818 213.1643528 420.4975749 0.029997444 1.522915746 2.771949853 ILENSEDS(ph)SPECLF ddPTM_A459_MK2206_30min_R2 2 ILENSEDSSPECLF 14 0 A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9 A0A087WSW7 HELLS Lymphoid-specific helicase 1 ILENSEDS(0.849)S(0.151)PECLF;ILENS(0.001)EDS(0.824)S(0.176)PECLF 128.96 0.0010917 3781200 19514.5 20458.9 18281.3 22398 23199 21874.2 25602 15596.7 18702.7 15755.1 TRUE FALSE 21008.54512 19442.94078 18890.78942 20568.01175 22288.09069 22706.63801 22240.42665 17635.24224 20329.42704 15241.01238 1.378421892 1.275698772 1.239470775 1.349517423 1.462375999 1.489837909 1.459248644 1.157091262 1.333863298 1 13.89567112 -10.13595137 8.0271736 0.999999986 1.349112277 0.523322054 0.100068484 0 0 0.106734301 0.02588687 7.31E-11 10.13595137 0.349112291 ILEQQNSSRT(ph)LEK ddPTM_A459_MK2206_30min_R2 1 ILEQQNSSRTLEK 13 1 E7EPK1;G3V1Q4;Q16181;Q16181-2;E7ES33;Q5JXL7 E7EPK1 SEPT7;DKFZp586I031 Septin-7 1 ILEQQNS(0.001)S(0.015)RT(0.984)LEK 82.774 0.044803 26245000 56512 103820 71924 67884 59090 73259 61489 38567 75239 45627 TRUE FALSE 60838.60217 98664.44977 74321.91026 62337.66005 56769.8297 76046.92258 53415.42044 43607.83932 81783.15222 44138.19473 1.378366346 2.235353085 1.68384572 1.412329173 1.28618377 1.722927796 1.210185889 0.987984207 1.852888473 1 15.42974 -5.695990504 3.639159371 1.356196814 1.83670412 0.258242821 0.323151834 0.281929744 7.436378232 0.087070361 0.155399494 2.01E-06 5.695990504 0.480507306 ILFFNT(ph)PK ddPTM_A459_MK2206_30min_R2 1 ILFFNTPK 8 0 K7EJC1;K7EJR3;R4GMR5;P48556 K7EJC1 PSMD8 26S proteasome non-ATPase regulatory subunit 8 1 ILFFNT(1)PK 115.78 0.022624 2349900 29389 26917 24935 21809 27348 20261 29591 19454 19965 27981 TRUE FALSE 31639.04444 25580.34092 25766.32045 20027.13494 26274.18011 21032.04655 25705.66615 21996.7046 21701.51961 27067.98226 1.168873399 0.945040553 0.951911384 0.739882816 0.97067376 0.777008288 0.94967057 0.812646631 0.801741312 1 14.72429973 -4.379999177 1.255876005 0.863040725 1.628811183 0.518539053 0.085306629 2.52595446 1.760815537 0.02334488 3.193759872 4.17E-05 4.379999177 0.765770459 ILGQS(ph)SPEK ddPTM_A459_MK2206_30min_R2 1 ILGQSSPEK 9 0 H7C485;P29374-3;P29374-2;P29374 H7C485 ARID4A AT-rich interactive domain-containing protein 4A 1 ILGQS(0.5)S(0.5)PEK 97.813 0.020257 3492500 97393 92493 93755 74448 71639 62721 98788 70890 67651 101650 TRUE FALSE 104849.483 87899.93212 96880.74491 68365.36025 68826.0929 65107.89161 85817.01693 80155.5664 73535.16169 98333.16882 1.066267712 0.89389911 0.985229563 0.695242115 0.699927539 0.66211526 0.872716886 0.815142717 0.747816455 1 16.58539051 -5.749861391 24.98753206 0.772032722 0.973008903 0.438221699 0.10140711 198.9099074 429281.9636 0.027160697 0.046539204 1.78E-06 5.749861391 0.200976181 ILGQS(ph)SPEKK ddPTM_A459_MK2206_30min_R2 1 ILGQSSPEKK 10 1 H7C485;P29374-3;P29374-2;P29374 H7C485 ARID4A AT-rich interactive domain-containing protein 4A 1 ILGQS(0.835)S(0.165)PEKK 102.53 0.027277 11412000 86435 83587 78415 69802 76247 54686 96921 72741 63859 100510 TRUE FALSE 93052.53006 79436.19113 81029.31696 64098.95331 73253.15967 56767.11405 84195.15628 82248.49846 69413.34039 97230.36693 0.957031563 0.816989523 0.833374588 0.659248292 0.753397956 0.583841405 0.865934779 0.84591369 0.71390598 1 16.56911935 -10.30036447 12.51904231 0.999995355 0.777870996 0.289769348 0.102715011 0 0 0.102332832 0.024819357 5.01E-11 10.30036447 -0.22212436 ILGQSS(ph)PEKK ddPTM_A459_MK2206_30min_R1 1 ILGQSSPEKK 10 1 H7C485;P29374-3;P29374-2;P29374 H7C485 ARID4A AT-rich interactive domain-containing protein 4A 1 ILGQS(0.066)S(0.934)PEKK 111.27 0.016079 24148000 7676.9 8967.9 9534.2 8422.3 5698.2 4973.3 6224.9 7229.5 7889 7612.1 TRUE FALSE 7023.939342 8384.08808 8887.045068 9070.987005 5471.228628 5254.883948 5809.648279 7166.293244 8709.089781 8555.144416 0.821019377 0.980005441 1.038795447 1.060296187 0.639524988 0.614236732 0.679082432 0.837658945 1.017994479 1 13.06257649 -6.251830269 24.81739806 0.77482354 0.979939305 0.262026714 0.142204734 802.9861552 2073867.13 0.044678907 0.056912902 5.60E-07 6.251830269 0.205115765 ILGQSS(ph)PEKK ddPTM_A459_MK2206_30min_R2 1 ILGQSSPEKK 10 1 H7C485;P29374-3;P29374-2;P29374 H7C485 ARID4A AT-rich interactive domain-containing protein 4A 1 ILGQS(0.174)S(0.826)PEKK 158.01 0.00086649 12873000 60176 57130 58115 57373 57517 38369 70269 54969 40712 69448 TRUE FALSE 64783.12083 54293.00727 60052.52509 52685.44237 55258.59358 39829.15918 61042.59589 62153.63704 44253.05617 67181.91745 0.964294014 0.808149117 0.893879296 0.784220582 0.822521828 0.59285535 0.908616458 0.925154259 0.65870487 1 16.03578535 -1.938053007 1.189648479 0.811201955 176.4611185 0.10891742 0.117188704 3760.054389 5.881843325 0.033835586 1801845.535 0.011533125 1.938053007 175.6499166 ILGSAS(ph)PEEEQEKPILDRPTR ddPTM_A459_MK2206_30min_R1 2 ILGSASPEEEQEKPILDRPTR 21 2 Q7Z422-4;Q7Z422-5;Q7Z422;Q7Z422-2;Q7Z422-3 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 1 ILGS(0.032)AS(0.761)PEEEQEKPILDRPT(0.207)R;ILGS(0.233)AS(0.767)PEEEQEKPILDRPTR 60.352 0.0079318 73069000 4998.2 4919.7 5036.5 4920.5 4248.6 4041.8 4581.6 4481.5 4510.2 4810.2 TRUE FALSE 4573.076843 4599.426636 4694.636412 5299.477763 4079.369265 4270.643223 4275.969824 4442.318718 4979.05143 5406.123891 0.845906778 0.850780842 0.86839231 0.980273088 0.754583015 0.789963994 0.790949284 0.82171974 0.921002095 1 12.40037886 -11.51811133 5.249916149 1.146392693 0.844922815 0.348203483 0.062711348 0.053401718 4.85E-05 0.030176423 0.015448313 3.03E-12 11.51811133 -0.301469877 ILGSAS(ph)PEEEQEKPILDRPTR ddPTM_A459_MK2206_30min_R2 3 ILGSASPEEEQEKPILDRPTR 21 2 Q7Z422-4;Q7Z422-5;Q7Z422;Q7Z422-2;Q7Z422-3 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 1 ILGS(0.263)AS(0.736)PEEEQEKPILDRPT(0.001)R;ILGS(0.265)AS(0.718)PEEEQEKPILDRPT(0.016)R;ILGS(0.017)AS(0.983)PEEEQEKPILDRPTR 81.606 0.0019669 152082000 153008 154537 175272 180719 186264 138645 191240 153642 146034 165205 TRUE FALSE 164722.4101 146862.9173 181115.481 165953.6796 178950.3395 143921.2326 166129.9583 173723.5369 158735.7734 159814.3744 1.030710853 0.918959373 1.13328655 1.038415225 1.119738698 0.900552489 1.039518247 1.087033238 0.993250914 1 17.28603765 ILIPS(ph)DIESSK ddPTM_A459_MK2206_30min_R1 1 ILIPSDIESSK 11 0 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 ILIPS(0.999)DIES(0.001)SK 124.48 0.0035592 13979000 6303.6 6701.3 6184 5329.7 5566.7 4529.7 5436.2 5617.8 5936.4 5794.6 TRUE FALSE 5767.445718 6265.044152 5764.24731 5740.194417 5344.966551 4786.1677 5073.561017 5568.684167 6553.510024 6512.478795 0.885599155 0.962006073 0.885108035 0.881414681 0.820726903 0.734922577 0.779052213 0.855079048 1.006300401 1 12.66899105 -8.254575993 7.536256615 1.003795776 0.849029598 0.514227051 0.059344422 0.112393234 54.3750076 0.053493257 0.017689682 5.56E-09 8.254575993 -0.154766178 ILIPS(ph)DIESSK ddPTM_A459_MK2206_30min_R2 2 ILIPSDIESSK 11 0 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 ILIPS(0.999)DIES(0.001)SK;ILIPS(0.975)DIES(0.01)S(0.015)K 101.53 0.013434 0 33352 32192 28277 28855 32688 25491 34113 24286.3 28716 30885 TRUE FALSE 35905.45476 30593.39209 29219.74107 26497.4542 31404.50488 26461.07787 29633.92212 27460.6028 31213.66577 29877.22498 1.201766723 1.023970336 0.977993809 0.886878022 1.051118533 0.885660495 0.991856578 0.919114905 1.044731088 1 14.86675854 -4.726284187 2.172922452 0.96466082 1.28749182 0.614211854 0.055147786 0.480843247 2.309882308 0.013495934 0.32142387 1.88E-05 4.726284187 0.322831 ILIVTQT(ph)PHYMR ddPTM_A459_MK2206_30min_R1 1 ILIVTQTPHYMR 12 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 ILIVT(0.006)QT(0.994)PHYMR 104.94 0.022295 26884000 3243.2 3129.5 3061.5 2787.5 3624.3 3138 3244.7 3224.2 2825.9 2057.5 TRUE FALSE 2967.348809 2925.768981 2853.69391 3002.193733 3479.936456 3315.670848 3028.251983 3196.011159 3119.662418 2312.398633 1.283234113 1.265252859 1.234083894 1.298302849 1.504903353 1.433866462 1.309571775 1.382119464 1.349102344 1 11.17517441 -10.6735098 3.389464935 0.999552331 1.341453295 0.632062577 0.077827322 17711242.67 27690196.64 86802.25821 0.021404383 2.12E-11 10.6735098 0.341900964 ILIVTQT(ph)PHYMR ddPTM_A459_MK2206_30min_R2 2 ILIVTQTPHYMR 12 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 ILIVT(0.002)QT(0.998)PHYMR;ILIVT(0.001)QT(0.999)PHYMR 169.3 0.00047908 45622000 172686 204856 190913 174848 201635 184728 229833 153318 151996 180653 TRUE FALSE 185906.9729 194683.1489 197277.9441 160562.3591 193717.7968 191757.9535 199655.651 173357.189 165216.3373 174758.3074 1.063794767 1.114013702 1.128861609 0.918768106 1.108489774 1.097275182 1.142467297 0.991982536 0.945399047 1 17.41500151 -7.906018885 7.03106877 0.971478218 1.080109753 0.38133517 0.06027804 0.2308514 14.51962594 0.034184183 0.016269254 1.24E-08 7.906018885 0.108631535 ILIVTQT(ph)PPYVK ddPTM_A459_MK2206_30min_R2 2 ILIVTQTPPYVK 12 0 A0A3B3ISF0;Q659C4-2;Q659C4;H0Y9K3;D6R9W6;D6RJB0;Q659C4-9;Q659C4-4 A0A3B3ISF0 LARP1B La-related protein 1B 1 ILIVT(0.155)QT(0.761)PPY(0.083)VK;ILIVT(0.02)QT(0.971)PPY(0.009)VK 124.81 0.0069354 4048300 52328 72128 64797 74531 68744 69359 74793 60372 58191 68755 TRUE FALSE 56334.27191 68546.2284 66957.29964 68441.57889 66044.76515 71998.50535 64972.58926 68262.82769 63252.34799 66511.52998 0.846985056 1.030591665 1.006702141 1.029018261 0.992982197 1.082496604 0.976862046 1.026330739 0.950998241 1 16.02131684 -4.757643294 24.99782985 1.012573058 0.846984818 0.680279941 0.033640425 59.9003243 394396.4672 0.007868617 0.057377631 1.75E-05 4.757643294 -0.165588239 ILKS(ph)PEIQR ddPTM_A459_MK2206_30min_R1 1 ILKSPEIQR 9 1 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 1 ILKS(1)PEIQR 126.66 0.022554 133820000 4375.8 4290.4 4572.3 4339.6 3567.8 3489 4164.7 4246.9 3906.3 3258.5 TRUE FALSE 4003.615232 4011.09418 4261.945015 4673.836744 3425.686971 3686.544165 3886.880462 4209.769801 4312.373864 3662.18758 1.09323052 1.095272728 1.163770266 1.276241766 0.935420946 1.006650829 1.061354826 1.149523259 1.17754041 1 11.83848997 -5.021246946 22.94326492 1.099991361 1.093740824 0 0.095334363 7980.067543 8617394.265 0.02583383 0.070163668 9.52E-06 5.021246946 -0.006250536 ILLAELEQLK ddPTM_A459_MK2206_30min_R1 2 ILLAELEQLK 10 0 P08670;B0YJC4;A0A1B0GTT5 P08670 VIM Vimentin 0 ; 189.38 0.0015978 82523000 3015.5 2857.4 2163.2 2177.1 2729.5 2290.8 2648.5 2331.7 1539.14 2827.3 FALSE TRUE 2759.01589 2671.382741 2016.368011 2344.780619 2620.778235 2420.503116 2471.823397 2311.314193 1699.139111 3177.567269 0.868279302 0.84070061 0.634563438 0.73791691 0.82477506 0.761747246 0.777898055 0.727384819 0.534729548 1 11.63370695 -7.778922927 8.097645013 0.723050272 0.774533862 0 0.122056976 0.748138704 249.0735813 0.062634692 0.031275855 1.66E-08 7.778922927 0.05148359 ILLDHEK ddPTM_A459_MK2206_30min_R2 1 ILLDHEK 7 0 P54136-2;P54136 P54136-2 RARS "Arginine--tRNA ligase, cytoplasmic" 0 111.65 0.03434 0 12195 13723 12467 13899 14872 10645 13188 10600 11660 13362 FALSE TRUE 13128.65858 13041.53578 12882.64356 12763.40724 14288.05055 11050.10293 11456.39976 11985.4564 12674.16572 12925.99903 1.015678443 1.008938322 0.99664587 0.987421336 1.105373017 0.854874188 0.886306716 0.927236368 0.980517304 1 13.65798817 -6.768439485 24.99999748 0.922521688 1.018620918 0.466272368 0.049356868 147.242781 525855.7445 0.017329263 0.01560577 1.70E-07 6.768439485 0.09609923 ILLSQTTGVAIPLHASSLDDVSLAS(ph)TPK ddPTM_A459_MK2206_30min_R1 1 ILLSQTTGVAIPLHASSLDDVSLASTPK 28 0 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 ILLSQTTGVAIPLHASSLDDVS(0.004)LAS(0.583)T(0.413)PK 104.84 8.79E-10 4063700 809.87 546.76 401.86 295.63 760.52 875.4 1093.4 470.21 360.38 431.18 TRUE FALSE 740.9863037 511.1658246 374.5828628 318.3994738 730.226878 924.9643915 1020.461281 466.0990035 397.8427906 484.5978336 1.529074734 1.054824824 0.772976759 0.657038583 1.506871941 1.908725808 2.105790018 0.961826428 0.820975174 1 8.920644145 -6.286419305 23.97684883 1.444445584 0.990681829 0.144213373 0.439168855 838.4926313 804819.7965 0.149077322 0.16912422 5.17E-07 6.286419305 -0.453763755 ILMEHIHK ddPTM_A459_MK2206_30min_R1 1 ILMEHIHK 8 0 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 0 75.213 0.033145 7827600 9709.7 10503 10062 9241.9 10897 9954.9 10286 9836.8 8612.9 8022.8 FALSE TRUE 8883.839027 9819.252791 9379.019474 9953.712739 10462.94942 10518.53784 9599.839708 9750.797895 9508.241777 9016.725033 0.985262276 1.089004351 1.040180269 1.103916633 1.160393533 1.166558567 1.06467034 1.08141236 1.05451167 1 13.13838781 -1.625368893 17.45097584 1.081773873 0.005388669 0 0.057165941 0 0 0.013464789 0 0.023693603 1.625368893 -1.076385204 ILMEHIHK ddPTM_A459_MK2206_30min_R2 1 ILMEHIHK 8 0 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 0 75.854 0.032271 2104200 21207 24047 18828 27892 24932 23618 26304 21846 23094 24936 FALSE TRUE 22830.62423 22852.86095 19455.71612 25613.13438 23953.04441 24516.79954 22850.2532 24701.34721 25102.67438 24122.34036 0.946451459 0.94737329 0.806543471 1.061801384 0.992981777 1.016352442 0.947265185 1.02400293 1.040640087 1 14.55808226 -5.777844428 24.99999752 1.009572236 0.904847749 0.549639641 0.046259498 181.9059109 277209.7386 0.01302032 0.019374596 1.67E-06 5.777844428 -0.104724487 ILPPLS(ph)PPQHR ddPTM_A459_MK2206_30min_R2 4 ILPPLSPPQHR 11 0 A0A087WV20;A0A087WTU9;Q8TCU4-3;Q8TCU4-2;Q8TCU4 A0A087WV20 ALMS1 Alstrom syndrome protein 1 1 ILPPLS(1)PPQHR;ILPPLS(1)PPQHR;ILPPLS(1)PPQHR;ILPPLS(1)PPQHR 124.47 0.0023574 14835800 63724 69008 65469 78958 73448 73204 77454 60214 66868 75729 TRUE FALSE 68602.75844 65581.16307 67651.70378 72506.87883 70564.06247 75989.82952 67284.19676 68084.17655 72684.05777 73257.96893 0.936454551 0.89520859 0.923472283 0.989747326 0.963227121 1.037290968 0.918455668 0.929375705 0.992165888 1 16.16069808 -5.674573383 5.990117525 0.97237127 0.914632543 0.375117332 0.033754147 0.23123888 12.64616035 0.009450507 0.016478785 2.12E-06 5.674573383 -0.057738727 ILPS(ph)PVQGS(ph)SEDNLS(ph)LVCLPR ddPTM_A459_MK2206_30min_R1 1 ILPSPVQGSSEDNLSLVCLPR 21 0 Q6PGQ1 Q6PGQ1 DRICH1 Aspartate-rich protein 1 3 ILPS(0.926)PVQGS(0.978)S(0.096)EDNLS(1)LVCLPR 66.068 0.024726 14460000 129.97 0 105.5 0 0 58.516 0 135.81 0 0 TRUE FALSE 118.915369 0 98.33895394 0 0 61.82912535 0 134.6226275 0 0 0 ILPTS(ph)ETK ddPTM_A459_MK2206_30min_R1 1 ILPTSETK 8 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 ILPT(0.222)S(0.748)ET(0.03)K 86.189 0.034221 10715000 6611.2 6910.1 6796.9 5968 5561.6 4695.9 5880.5 5574.5 5134.3 5180.2 TRUE FALSE 6048.882723 6460.251234 6335.545365 6427.656394 5340.069695 4961.7778 5488.222575 5525.762734 5668.028858 5821.962285 1.038976625 1.109634676 1.088214773 1.104036076 0.917228493 0.852251794 0.942675735 0.94912376 0.973559872 1 12.50728978 -6.26181257 24.99854114 0.932428509 1.087173997 0.75625486 0.040513779 16.10258563 1078633.146 0.012696062 0.015313435 5.47E-07 6.26181257 0.154745489 ILPTS(ph)ETK ddPTM_A459_MK2206_30min_R2 2 ILPTSETK 8 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 ILPT(0.203)S(0.797)ETK;ILPT(0.308)S(0.692)ET(0.001)K 140.17 0.0023584 19667200 171433 168358 160049 151701 164102 120706 187941 122202 110716 157027 TRUE FALSE 184558.0423 159997.5865 165384.9538 139306.543 157658.5309 125299.5514 163264.1209 138174.221 120345.8776 151903.2218 1.214971217 1.053286327 1.088752113 0.917074314 1.037887999 0.824864344 1.074790376 0.909620081 0.792253621 1 17.21279294 -1.522881001 0.433488694 0.917692361 6.863987841 0.50404564 0.086849168 66.58937985 0.831027278 0.0546977 346.6531811 0.029999844 1.522881001 5.94629548 ILQFEDILANTFYR ddPTM_A459_MK2206_30min_R1 2 ILQFEDILANTFYR 14 0 A0A494C0S0;Q9H3E2-2;Q9H3E2 A0A494C0S0 SNX25 Sorting nexin-25 0 ; 100.38 0.012694 30031000 7773.5 6853.2 7476.8 6609.7 8778.9 7647.6 8052 7477.8 6561.5 5955.9 FALSE TRUE 7112.323005 6407.055434 6969.295648 7118.780239 8429.217823 8080.600503 7514.865772 7412.422383 7243.591406 6693.761857 1.062530033 0.957168117 1.041162772 1.063494697 1.259264671 1.207183745 1.122667034 1.107362727 1.08214059 1 12.70860151 -6.016173495 15.60692019 1.140720123 1.020361838 0.327686374 0.070247314 5.761684711 5561.590829 0.020988364 0.028202452 9.63E-07 6.016173495 -0.120358284 ILS(ph)DVTHSAVFGVPASK ddPTM_A459_MK2206_30min_R1 4 ILSDVTHSAVFGVPASK 17 0 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 1 ILS(0.731)DVT(0.266)HS(0.003)AVFGVPASK;ILS(0.992)DVT(0.008)HSAVFGVPASK;ILS(0.558)DVT(0.424)HS(0.018)AVFGVPASK;ILS(0.999)DVT(0.001)HSAVFGVPASK 209.23 4.18E-09 117387400 14965.33 16305.99 16539.73 15033.01 15341.77 12267.72 15424.47 14910.88 15189.26 14067 TRUE FALSE 13692.4501 15244.46709 15417.05921 16190.85503 14730.67481 12962.3077 14395.53175 14780.51575 16768.23793 15809.72616 0.866077626 0.964246119 0.975162951 1.024107241 0.931747626 0.819894511 0.910549089 0.934900175 1.060627981 1 13.94852476 -8.247176096 22.22970686 1.030313943 0.930192094 0.352403879 0.05525092 195.6792945 304976.3782 0.041376395 0.015413024 5.66E-09 8.247176096 -0.10012185 ILS(ph)DVTHSAVFGVPASK ddPTM_A459_MK2206_30min_R2 1 ILSDVTHSAVFGVPASK 17 0 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 1 ILS(0.983)DVT(0.009)HS(0.008)AVFGVPASK 76.82 0.020573 1009900 3296.7 3024.6 2855 4135.3 3376.6 3284.4 4341.8 2726.6 3077.4 3823.7 TRUE FALSE 3549.097887 2874.402762 2950.184275 3797.432762 3244.017718 3409.390143 3771.716445 3082.975982 3345.066689 3698.932982 0.959492347 0.777089711 0.797577109 1.026629242 0.877014462 0.921722605 1.019676881 0.833477113 0.904332873 1 11.85289345 -5.739727881 24.99752916 0.933352141 0.837956717 0.25475628 0.074045313 332.6922291 383042.1393 0.019737295 0.034147509 1.82E-06 5.739727881 -0.095395424 ILS(ph)FNTMRYTFNMVTMMKEK ddPTM_A459_MK2206_30min_R2 1 ILSFNTMRYTFNMVTMMKEK 20 2 Q70CQ2-3;Q70CQ2-2;Q70CQ2;A0A0C4DG73 Q70CQ2-3 USP34 Ubiquitin carboxyl-terminal hydrolase 34;Ubiquitin carboxyl-terminal hydrolase 1 ILS(0.451)FNT(0.451)MRY(0.048)T(0.051)FNMVTMMKEK 40.179 0.047237 0 11149 10245 12509 9667.4 13654 8675.5 16147 9287.4 11809 10694 TRUE FALSE 12002.57601 9736.248198 12926.04382 8877.542496 13117.87535 9005.652232 14026.8795 10501.29507 12836.12547 10345.05566 1.160223435 0.94114991 1.249490022 0.858143522 1.268033328 0.87052719 1.355901792 1.01510281 1.240798107 1 13.33665379 -7.257502226 24.98832441 1.154209237 1.061796331 0.07364547 0.164734044 963.3446851 6114187.061 0.058653352 0.043735309 5.53E-08 7.257502226 -0.092412905 ILS(ph)PDSFIK ddPTM_A459_MK2206_30min_R2 2 ILSPDSFIK 9 0 Q8IZT6-2;Q8IZT6 Q8IZT6-2 ASPM Abnormal spindle-like microcephaly-associated protein 1 ILS(1)PDSFIK;ILS(0.994)PDS(0.006)FIK 132.25 0.0034083 4250100 57617 45050 45314 52570 45250 39515 50108 34431 28937 52602 TRUE FALSE 62028.20182 42812.88251 46824.74614 48274.86284 43473.25764 41018.77101 43528.75941 38931.24992 31453.88795 50885.60105 1.218973551 0.841355543 0.920196385 0.948693969 0.854333185 0.806097799 0.855423902 0.765073992 0.618129438 1 15.63496986 -2.048661308 1.103391574 0.829744278 200 0.531360201 0.102813522 674.0562171 2.066927058 0.031713522 338236.9128 0.008940024 2.048661308 199.1702557 ILS(ph)PSMASK ddPTM_A459_MK2206_30min_R2 3 ILSPSMASK 9 0 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91;Q8IX09;C9JWI7 A0A494BZT8 TACC3;ERIC-1s Transforming acidic coiled-coil-containing protein 3 1 ILS(0.81)PS(0.189)MAS(0.001)K;ILS(0.998)PS(0.002)MAS(0.001)K;ILS(0.816)PS(0.181)MAS(0.003)K 113.67 0.00898 61677400 469102 446724 390689 470164 451282 373624 442027 294411 295743 395430 TRUE FALSE 505016.8098 424540.3358 403714.3763 431750.0972 433562.4012 387842.5231 383988.3239 332891.5286 321466.1916 382527.1515 1.320211671 1.109830594 1.055387506 1.128678306 1.133416019 1.01389541 1.003819788 0.870242876 0.840374834 1 18.54520263 -7.098378406 1.125089665 0.89259612 1.15177969 0.654812363 0.077032074 0.313554816 0.799208971 0.049337269 0.03236836 7.97E-08 7.098378406 0.25918357 ILSDVT(ph)HSAVFGVPASK ddPTM_A459_MK2206_30min_R1 4 ILSDVTHSAVFGVPASK 17 0 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 1 ILS(0.054)DVT(0.946)HSAVFGVPASK;ILS(0.022)DVT(0.976)HS(0.002)AVFGVPASK;ILS(0.196)DVT(0.8)HS(0.004)AVFGVPASK;ILS(0.008)DVT(0.992)HSAVFGVPASK 190.18 1.74E-07 505179200 35348.2 40178.1 37822.9 32601.1 31876.4 29405.7 33874.4 33394.8 32079.5 30778 TRUE FALSE 32341.64997 37562.49839 35255.58693 35112.04237 30606.69549 31070.62532 31614.70058 33102.83278 35414.27882 34591.011 0.934972672 1.085903456 1.019212388 1.015062623 0.884816448 0.898228309 0.913957114 0.956977892 1.023800051 1 15.07810956 -6.153412523 8.370009518 0.94019888 1.019909653 0.274546637 0.05286034 0.372183652 26.16476993 0.015875748 0.020535036 7.02E-07 6.153412523 0.079710773 ILSDVT(ph)HSAVFGVPASK ddPTM_A459_MK2206_30min_R2 4 ILSDVTHSAVFGVPASK 17 0 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 1 ILS(0.005)DVT(0.995)HSAVFGVPASK;ILS(0.016)DVT(0.961)HS(0.023)AVFGVPASK;ILS(0.014)DVT(0.985)HS(0.001)AVFGVPASK;ILS(0.023)DVT(0.975)HS(0.002)AVFGVPASK 135.36 0.00070051 140702300 846551 958917 883288 960061 1013979 806644 1086845 720337 753309 1012844 TRUE FALSE 911363.5954 911298.5762 912736.3811 881620.9452 974165.0896 837341.4027 944140.946 814487.5192 818830.4551 979794.9832 0.930157442 0.930091082 0.931558537 0.899801449 0.994254009 0.854608788 0.963610717 0.831283619 0.835716113 1 19.90212038 -7.756106316 24.99996822 0.8751249 0.927790763 0.08288019 0.055617834 229.0522876 1073750.672 0.025247856 0.014028874 1.75E-08 7.756106316 0.052665863 ILSDVTHSAVFGVPASK ddPTM_A459_MK2206_30min_R1 1 ILSDVTHSAVFGVPASK 17 0 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 0 142.57 0.00070043 2589900 2845 2628.2 3115.5 2655.1 2632.6 2261.9 2911.5 2697.7 2464.9 2446.6 FALSE TRUE 2603.01781 2457.103702 2904.02854 2859.596262 2527.737967 2389.966823 2717.279147 2674.114293 2721.135176 2749.703279 0.946654074 0.893588672 1.056124333 1.039965397 0.919276631 0.869172627 0.988208134 0.97251013 0.989610478 1 11.42506023 ILSHGGFR ddPTM_A459_MK2206_30min_R1 1 ILSHGGFR 8 0 B4DY09;Q12905 B4DY09 ILF2 Interleukin enhancer-binding factor 2 0 116.9 0.012817 4231100 3460.9 3700.6 3840.7 3109.3 3616.5 3655.5 3993.9 2817.5 3215.5 3656 FALSE TRUE 3166.532281 3459.690267 3580.003985 3348.778825 3472.447147 3862.471251 3727.474218 2792.866895 3549.762732 4108.932881 0.770645901 0.841992402 0.871273415 0.814999641 0.845097072 0.940018093 0.907163569 0.679706137 0.863913535 1 12.00454805 -4.772138113 3.666354024 0.855595621 0.760430087 0.103505756 0.079785096 0.727839042 16.72174344 0.020105009 0.193110891 1.69E-05 4.772138113 -0.095165534 ILSQS(ph)TDSLNMR ddPTM_A459_MK2206_30min_R1 2 ILSQSTDSLNMR 12 0 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ILSQS(0.851)T(0.072)DS(0.077)LNMR;ILS(0.005)QS(0.916)T(0.078)DS(0.002)LNMR 222.56 2.00E-08 72416000 3182.8 3292.7 2955 2994.8 3412.1 3118.4 3375.7 2502.11 2297.2 2252.44 TRUE FALSE 2912.086146 3078.344632 2754.422833 3225.460015 3276.188832 3294.961113 3150.513212 2480.234316 2536.002161 2531.489272 1.150345047 1.216021204 1.088064193 1.274135368 1.294174488 1.301589997 1.244529553 0.979753042 1.001782701 1 11.30577066 -7.762189392 24.99993269 0.993075844 1.226175584 0.744639346 0.061788023 10.78908377 359579.4007 0.034798923 0.018266497 1.73E-08 7.762189392 0.23309974 ILSQS(ph)TDSLNMR ddPTM_A459_MK2206_30min_R2 1 ILSQSTDSLNMR 12 0 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ILSQS(0.952)T(0.024)DS(0.024)LNMR 234.04 2.06E-10 15965000 20577 29488 20487 30043 16353 28964 35314 24809 25130 20820 TRUE FALSE 22152.39094 28023.6688 21170.02635 27588.3908 15710.89905 30066.24532 30677.22938 28051.62148 27315.76198 20140.64511 1.099884876 1.391398769 1.051109646 1.369786849 0.780059376 1.492814414 1.523150287 1.392786643 1.356250598 1 14.29782227 ILSQSTDS(ph)LNMR ddPTM_A459_MK2206_30min_R2 1 ILSQSTDSLNMR 12 0 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ILS(0.001)QS(0.168)T(0.168)DS(0.664)LNMR 103.44 0.040567 5581600 60337 76710 64273 70380 59763 62977 67602 65139 54894 56188 TRUE FALSE 64956.44711 72900.69295 66415.82974 64629.72887 57416.40434 65373.63387 58725.7762 73652.89096 59668.58089 54354.59016 1.195049892 1.341205825 1.221899191 1.189039025 1.05633037 1.202725173 1.080419814 1.355044546 1.097765262 1 15.73011425 -14.52287875 0.109171077 0.418871795 1.302225351 0.313666394 0.091960006 225.9184561 1.63688529 29.91850483 1.211136884 3.00E-15 14.52287875 0.883353555 ILTEAEIDAHLVALAERD ddPTM_A459_MK2206_30min_R1 1 ILTEAEIDAHLVALAERD 18 1 G3V5Z7;P60900;P60900-2;P60900-3;H0YJC4 G3V5Z7 PSMA6 Proteasome subunit alpha type;Proteasome subunit alpha type-6 0 87.323 0.0093666 4293700 1471.4 1338.6 1205.3 1116.3 1520.9 1203.8 1513.4 1461.6 1046.7 1039.5 FALSE TRUE 1346.249703 1251.456897 1123.487594 1202.277619 1460.319332 1271.958116 1412.443847 1448.821385 1155.508211 1168.281108 1.15233371 1.071195013 0.961658617 1.029099599 1.249972565 1.088743203 1.208993142 1.2401308 0.989066932 1 10.19017174 -6.206652731 24.99862258 1.143429662 1.048265264 0.120490422 0.095716077 531.1318055 242349.8978 0.027719779 0.035786044 6.21E-07 6.206652731 -0.095164398 ILTFDQLALDS(ph)PK ddPTM_A459_MK2206_30min_R1 1 ILTFDQLALDSPK 13 0 F8VUA6;H0YHA7;J3QQ67;Q07020-2;Q07020;G3V203 F8VUA6 RPL18 60S ribosomal protein L18 1 ILTFDQLALDS(1)PK 162.7 0.00036326 23660000 939.94 1491.9 1589.3 1091.9 1063 776.21 1162.7 988.78 1582.4 1209.3 TRUE FALSE 859.9931672 1394.777039 1481.422744 1175.998327 1020.658459 820.1583394 1085.138404 980.1352007 1746.896143 1359.117214 0.632758645 1.026237491 1.089988949 0.865266303 0.750971622 0.603449306 0.798414142 0.721155755 1.285316767 1 10.40845417 -8.256688646 24.99706913 1.142658392 0.819968479 0.407300759 0.159727865 399.0788915 2099873.985 0.12413542 0.043527165 5.54E-09 8.256688646 -0.322689912 ILTFDQLALDSPK ddPTM_A459_MK2206_30min_R1 2 ILTFDQLALDSPK 13 0 F8VUA6;H0YHA7;J3QQ67;Q07020-2;Q07020;G3V203 F8VUA6 RPL18 60S ribosomal protein L18 0 ; 247.13 1.39E-21 13697700 5418.3 5108 5834.5 5860.8 5745.8 5022.4 5222.9 5478.6 3831.1 5271.8 FALSE TRUE 4957.445132 4775.468272 5438.470396 6312.199831 5516.932619 5306.763948 4874.489871 5430.701178 4229.356555 5924.910384 0.836712256 0.805998397 0.917899182 1.065366296 0.931141952 0.89566991 0.822711156 0.916587902 0.713826249 1 12.53257762 -7.0452451 7.121087679 0.856497709 0.914424467 0.054064623 0.093044466 0.735316501 97.29590043 0.036609765 0.028703052 9.01E-08 7.0452451 0.057926758 ILTT(ph)NTWSSELSK ddPTM_A459_MK2206_30min_R1 1 ILTTNTWSSELSK 13 0 O60701;O60701-2;O60701-3 O60701 UGDH UDP-glucose 6-dehydrogenase 1 ILT(0.092)T(0.907)NT(0.001)WSSELSK 154.6 0.0008898 6333700 1451 1839.4 1529.1 1706 1703.8 1386 1665.1 1754 1355.1 1225.5 TRUE FALSE 1327.58483 1719.654726 1425.308952 1837.396416 1635.934038 1464.474122 1554.024217 1738.664963 1495.967494 1377.324192 0.963886962 1.248547536 1.034839118 1.334033357 1.187762509 1.063274813 1.128292254 1.262349832 1.086140433 1 10.42765246 -9.855852507 14.41854514 0.999997121 1.152543525 0.136238987 0.10856572 0 0 0.099692293 0.024178932 1.39E-10 9.855852507 0.152546405 ILTVEDHYYEGGIGEAVSSAVVGEPGITVTHLAVNR ddPTM_A459_MK2206_30min_R1 3 ILTVEDHYYEGGIGEAVSSAVVGEPGITVTHLAVNR 36 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ;; 190.8 6.75E-59 83743600 4595.67 4297.44 4372.97 3703.76 5725.74 4265.14 5114.61 4165.17 4154.03 4170.72 FALSE TRUE 4204.784134 4017.675875 4076.14498 3989.024237 5497.671651 4506.628541 4773.423699 4128.754358 4585.856284 4687.420281 0.897035871 0.857118763 0.869592385 0.85100631 1.172856565 0.96143044 1.018347708 0.880815909 0.978332645 1 12.19457844 ILVSIGESFGT(ph)SEK ddPTM_A459_MK2206_30min_R1 2 ILVSIGESFGTSEK 14 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 ILVSIGES(0.001)FGT(0.889)S(0.11)EK;ILVSIGES(0.001)FGT(0.97)S(0.03)EK 267.47 8.26E-44 14184600 6612 5724.1 5663.9 5140.2 4277.7 4185.6 4947 4567.1 5215.8 4055.4 TRUE FALSE 6049.614679 5351.46005 5279.450249 5536.099095 4107.310151 4422.585055 4616.994656 4527.170326 5758.001075 4557.813569 1.327306303 1.174128772 1.158329574 1.214639215 0.901157998 0.970330398 1.012984535 0.993276767 1.263325274 1 12.1541262 -6.236177392 24.01188127 1.019990835 1.211119338 0.490349211 0.097277071 425.8959404 404819.6325 0.029128218 0.037586466 5.81E-07 6.236177392 0.191128503 ILVSIGESFGT(ph)SEK ddPTM_A459_MK2206_30min_R2 2 ILVSIGESFGTSEK 14 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 ILVSIGES(0.003)FGT(0.959)S(0.038)EK;ILVSIGES(0.174)FGT(0.413)S(0.413)EK 186.42 0.00019523 3788400 25242 25932 22625.9 22446 27702 18376.4 26839 20147.5 22372.8 26767 TRUE FALSE 27174.54693 24644.25459 23380.23621 20612.09 26614.28029 19075.72678 23315.00706 22780.84743 24318.7457 25893.59498 1.049469838 0.951750987 0.902935117 0.796030447 1.02783257 0.736696731 0.900415994 0.879786968 0.939179968 1 14.66030766 -4.862359385 2.113270399 0.888959046 1.077140949 0.240869696 0.081454919 0.732119567 4.298288629 0.020611627 0.250499841 1.37E-05 4.862359385 0.188181903 ILVSVMTFPY(ph)FT(ph)GLSMLSAISTER ddPTM_A459_MK2206_30min_R2 1 ILVSVMTFPYFTGLSMLSAISTER 24 0 Q96LA9 Q96LA9 MRGPRX4 Mas-related G-protein coupled receptor member X4 2 ILVS(0.028)VMT(0.145)FPY(0.826)FT(0.507)GLS(0.416)MLS(0.07)AIS(0.004)T(0.004)ER 54.672 0.030173 0 2518.7 5368.1 4792.1 5730.2 4683.7 4974.4 3989.7 3660 4530.6 3596.9 TRUE FALSE 2711.533609 5101.52796 4951.866222 5262.02433 4499.794404 5163.704278 3465.847598 4138.374567 4924.663399 3479.533448 0.7792808 1.466152873 1.42314086 1.512278703 1.293217747 1.484022026 0.996066757 1.189347546 1.415322908 1 11.76467816 -7.255543534 24.9906822 1.165963266 1.344048595 0.12317229 0.225774473 1061.935329 4501230.647 0.087064546 0.065628303 5.55E-08 7.255543534 0.178085329 ILVSVMTFPY(ph)FTGLS(ph)MLSAISTER ddPTM_A459_MK2206_30min_R2 1 ILVSVMTFPYFTGLSMLSAISTER 24 0 Q96LA9 Q96LA9 MRGPRX4 Mas-related G-protein coupled receptor member X4 2 ILVS(0.048)VMT(0.058)FPY(0.893)FT(0.156)GLS(0.689)MLS(0.114)AIS(0.021)T(0.021)ER 52.909 0.017578 6047300 8550.8 10629 10811 17324 11901 14619 11113 11618 10188 10642 TRUE FALSE 9205.455822 10101.17932 11171.43334 15908.57378 11433.70694 15175.33629 9653.849751 13136.51249 11074.13382 10294.75241 0.894189142 0.981196916 1.08515804 1.545309022 1.110634475 1.474084629 0.937744723 1.276039672 1.075706669 1 13.32962151 -5.384212737 3.705887131 1.215979965 0.93627194 0.238080463 0.18485843 0.301718739 7.3096723 0.047479238 0.108866231 4.13E-06 5.384212737 -0.279708024 IMAT(ph)PEQVGK ddPTM_A459_MK2206_30min_R1 2 IMATPEQVGK 10 0 P12956;B1AHC9;P12956-2 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 IMAT(1)PEQVGK;IMAT(1)PEQVGK 130.69 0.006401 44128000 15681.1 15905.8 16444.6 13520.9 14916.3 14138.5 15338.8 14445.8 12704.3 11485.4 TRUE FALSE 14347.3401 14870.32953 15328.38637 14562.28206 14322.15219 14939.00965 14315.57664 14319.50189 14024.95745 12908.29806 1.111481934 1.151997688 1.187483144 1.128133391 1.109530638 1.157318306 1.109021233 1.109325321 1.086507096 1 13.65601118 -8.891691674 0.498988863 0.9929813 1.146938208 0.783414269 0.022189275 0.746560326 0.37211906 0.033786913 0.01232921 1.28E-09 8.891691674 0.153956907 IMAT(ph)PEQVGK ddPTM_A459_MK2206_30min_R2 2 IMATPEQVGK 10 0 P12956;B1AHC9;P12956-2 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 IMAT(1)PEQVGK;IMAT(1)PEQVGK 120.57 0.011801 36721000 274000 299750 289270 331510 302250 272040 315930 243520 255480 290420 TRUE FALSE 294977.6507 284864.8509 298914.1174 304424.5726 290382.1463 282392.6728 274448.0115 275348.9001 277701.1886 280943.6192 1.049953195 1.013957362 1.063964785 1.083578881 1.033595805 1.005157809 0.976879319 0.980085972 0.988458785 1 18.09992111 -6.793759761 2.664348709 0.985329126 1.051375195 0.749254597 0.017461198 0.144727398 2.103204812 0.007121105 0.00647612 1.61E-07 6.793759761 0.066046069 IMDPNIVGSEHYDVAR ddPTM_A459_MK2206_30min_R1 5 IMDPNIVGSEHYDVAR 16 0 P06576;H0YH81 P06576 ATP5B "ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta" 0 ;;;; 137.27 0.00087402 33151500 16728.4 12870.9 13822.1 12075.2 18472.9 18150.4 17475.5 14081 12236.2 11593.4 FALSE TRUE 15305.56174 12033.00207 12883.89436 13005.234 17737.08528 19178.05996 16309.74128 13957.8913 13508.19678 13029.67792 1.174669231 0.923507254 0.988811423 0.998123981 1.361283478 1.471875213 1.25173787 1.071238398 1.036725302 1 13.6695138 -6.235344934 24.29235034 1.218671618 1.011975262 0.246253269 0.149407573 730.2716351 679838.1804 0.047675671 0.061525499 5.82E-07 6.235344934 -0.206696356 IMDPNIVGSEHYDVAR ddPTM_A459_MK2206_30min_R2 1 IMDPNIVGSEHYDVAR 16 0 P06576;H0YH81 P06576 ATP5B "ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta" 0 118.55 0.0024642 3776200 13907 17512 15726 13653 15543 16590 14995 13040 19932 12892 FALSE TRUE 14971.73061 16642.37954 16250.29699 12537.50623 14932.70372 17221.34408 13026.13849 14744.37277 21665.64933 12471.3351 1.200491407 1.334450515 1.303011816 1.005305858 1.197362079 1.380874136 1.044486287 1.182260974 1.737235762 1 13.6063283 IMEETS(ph)GMEEEEEEESIAAVPGRR ddPTM_A459_MK2206_30min_R1 1 IMEETSGMEEEEEEESIAAVPGRR 24 1 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 IMEET(0.227)S(0.773)GMEEEEEEESIAAVPGRR 82.381 9.40E-05 2528500 295.02 329.95 379.45 260.05 399.08 260.25 264.54 350.64 323.69 242.96 TRUE FALSE 269.9269998 308.470195 353.6939912 280.0790961 383.1837985 274.9851301 246.8930193 347.5743914 357.3387338 273.0597191 0.988527348 1.129680335 1.295299037 1.02570638 1.403296685 1.007051245 0.904172245 1.272887823 1.308646823 1 8.093072698 -11.37648077 2.760043411 0.941505628 1.148349927 0.073884171 0.157581084 85464722.61 48981216.89 32733081.46 0.040610484 4.20E-12 11.37648077 0.206844299 IMNTFS(ph)VVPSPK ddPTM_A459_MK2206_30min_R1 2 IMNTFSVVPSPK 12 0 P04350;M0R2D3;M0QYM7;M0R042;P68371;P07437;Q5JP53;Q5ST81;A0A0B4J269;Q13509;Q13509-2;G3V2A3 P04350;P68371;P07437;A0A0B4J269 TUBB4A;TUBB4B;TUBB;TUBB3 Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-3 chain 1 IMNT(0.002)FS(0.995)VVPS(0.004)PK;IMNT(0.011)FS(0.985)VVPS(0.004)PK 150.9 0.00053682 42982000 8809.2 9560.4 9426.5 9030.2 9353 8124.1 8932.2 8244.3 7592.4 6366.3 TRUE FALSE 8059.931281 8938.016222 8786.655444 9725.707569 8980.450205 8584.079521 8336.349236 8172.220954 8381.65715 7155.005307 1.126474536 1.249197707 1.228043176 1.359287261 1.255128378 1.199730699 1.165107345 1.142168399 1.171439683 1 12.80473712 -8.563668647 0.578917996 1.001274752 1.24590721 0.587770425 0.057903085 0.696972705 0.545874112 0.066248248 0.028785913 2.73E-09 8.563668647 0.244632458 IMNTFS(ph)VVPSPK ddPTM_A459_MK2206_30min_R2 2 IMNTFSVVPSPK 12 0 P04350;M0R2D3;M0QYM7;M0R042;P68371;P07437;Q5JP53;Q5ST81;A0A0B4J269;Q13509;Q13509-2;G3V2A3 P04350;P68371;P07437;A0A0B4J269 TUBB4A;TUBB4B;TUBB;TUBB3 Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-3 chain 1 IMNT(0.001)FS(0.997)VVPS(0.002)PK;IMNT(0.035)FS(0.961)VVPS(0.004)PK 144.4 0.00074545 14149000 94377 124809 96339 114618 97315 104801 103113 89471 96164 105713 TRUE FALSE 101602.5757 118611.1665 99550.89418 105253.3428 93493.92413 108789.2755 89574.13924 101165.1669 104528.1709 102263.5935 0.993536138 1.159857213 0.97347346 1.029235715 0.914244463 1.063812368 0.875914255 0.98925887 1.022144513 1 16.6419331 -5.299037158 24.73122682 0.981311291 1.076696733 0.254049026 0.063782633 531.1407515 349375.0036 0.015607626 0.032490905 5.02E-06 5.299037158 0.095385442 IMPDS(ph)NDSPPAER ddPTM_A459_MK2206_30min_R1 1 IMPDSNDSPPAER 13 0 Q9Y657 Q9Y657 SPIN1 Spindlin-1 1 IMPDS(0.5)NDS(0.5)PPAER 76.24 0.045526 5492000 622.14 416.23 368.76 531.96 511.44 565.48 607.55 404.4 274.37 291.71 TRUE FALSE 569.223726 389.1333513 343.7295986 572.9316514 491.0682618 597.4969889 567.021448 400.8643734 302.8917433 327.8492371 1.736236238 1.186927732 1.048438001 1.747546087 1.49784781 1.822474849 1.729518888 1.22270949 0.92387509 1 8.356888728 -7.988326308 4.70428057 0.986451954 1.522987941 0.486978669 0.239372263 0.179506856 10.43599259 0.16397705 0.068872547 1.03E-08 7.988326308 0.536535987 IMPDS(ph)NDSPPAEREPGEVVDSLVGK ddPTM_A459_MK2206_30min_R1 1 IMPDSNDSPPAEREPGEVVDSLVGK 25 1 Q9Y657 Q9Y657 SPIN1 Spindlin-1 1 IMPDS(0.591)NDS(0.403)PPAEREPGEVVDS(0.006)LVGK 42.746 0.046137 7391300 2058.7 2013.2 2080.8 1740.3 2244.1 1829.1 2093.2 2525.1 1673.4 1356.4 TRUE FALSE 1883.596754 1882.140314 1939.561093 1874.338208 2154.712745 1932.662061 1953.566447 2503.023317 1847.355918 1524.441072 1.235598272 1.234642879 1.272309654 1.229524868 1.413444432 1.26778404 1.28149686 1.641928548 1.211825076 1 10.57406467 -6.225942359 24.31183869 1.332032353 1.244512803 0.014277058 0.153367118 1279.070117 876031.3326 0.043475415 0.056123766 5.94E-07 6.225942359 -0.08751955 IMPDS(ph)NDSPPAEREPGEVVDSLVGK ddPTM_A459_MK2206_30min_R2 2 IMPDSNDSPPAEREPGEVVDSLVGK 25 1 Q9Y657 Q9Y657 SPIN1 Spindlin-1 1 IMPDS(0.541)NDS(0.458)PPAEREPGEVVDS(0.001)LVGK;IMPDS(0.5)NDS(0.5)PPAEREPGEVVDS(0.001)LVGK 61.703 0.0029344 5576400 22007.8 29147 26240.6 29814.4 26996.8 24521.9 30947.9 23579.4 24593.8 25973.4 TRUE FALSE 23692.73409 27699.60236 27115.44851 27378.46815 25936.76998 25455.09809 26884.40355 26661.30854 26732.92427 25125.89009 0.942960986 1.102432681 1.0791836 1.089651672 1.032272684 1.013102342 1.069988106 1.061109017 1.063959294 1 14.61688708 -10.83882283 5.611168076 0.999992269 1.053285919 0.104505219 0.043692692 4.12E-06 5.02E-07 0.041212982 0.009994166 1.45E-11 10.83882283 0.05329365 IMPDSNDS(ph)PPAEREPGEVVDSLVGK ddPTM_A459_MK2206_30min_R1 1 IMPDSNDSPPAEREPGEVVDSLVGK 25 1 Q9Y657 Q9Y657 SPIN1 Spindlin-1 1 IMPDS(0.321)NDS(0.679)PPAEREPGEVVDSLVGK 69.98 0.00067925 8634600 2545.9 2426 2273.1 2793.3 2813.2 2318.5 2784.5 2837.7 2452.4 1938.6 TRUE FALSE 2329.357836 2268.066959 2118.808305 3008.44045 2701.144287 2449.771466 2598.751086 2812.890288 2707.335756 2178.768404 1.069116769 1.040985795 0.97247982 1.380798641 1.239757416 1.124383602 1.192761507 1.291046026 1.242599145 1 11.08929714 -5.739837348 24.99985939 1.219249525 1.028873246 0.422619156 0.097435476 218.7335095 253136.5541 0.025856662 0.04473371 1.82E-06 5.739837348 -0.190376279 IMS(ph)SIGEGIDFSQER ddPTM_A459_MK2206_30min_R1 1 IMSSIGEGIDFSQER 15 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 IMS(0.5)S(0.5)IGEGIDFSQER 164.66 9.28E-05 3472000 804.9 799.4 881.56 894.58 1044.3 895.28 849.57 742.23 726.66 599.23 TRUE FALSE 736.4390283 747.3589147 821.7221634 963.4807066 1002.70332 945.9699799 792.8967354 735.7407614 802.1989074 673.4671364 1.093504031 1.109718462 1.220136988 1.43062765 1.488867482 1.404626787 1.177335452 1.092467207 1.191147814 1 9.395463737 -7.486706866 6.187413559 1.110965623 1.295285523 0.318965788 0.129491442 0.285172497 32.61154478 0.065234673 0.042168887 3.26E-08 7.486706866 0.1843199 IMSCS(ph)PDTQCSR ddPTM_A459_MK2206_30min_R1 2 IMSCSPDTQCSR 12 0 Q9C0C9;K7EQ12 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 IMS(0.022)CS(0.975)PDT(0.003)QCSR;IMS(0.054)CS(0.922)PDT(0.021)QCS(0.004)R 209.67 6.83E-06 53042000 4845.2 4886.5 4442.2 4046.5 5022.4 4131.7 4950.7 4395.2 3606.3 3679.9 TRUE FALSE 4433.090297 4568.387962 4140.675841 4358.162131 4822.347173 4365.633283 4620.447836 4356.77323 3981.18779 4135.793794 1.071883783 1.104597615 1.001180438 1.053766785 1.166002807 1.055573247 1.117185253 1.053430961 0.962617574 1 12.01394854 -8.120348716 4.436938384 0.982846909 1.08074693 0.466413746 0.042128967 0.206673797 6.342739386 0.031444998 0.011101349 7.58E-09 8.120348716 0.097900021 IMSCS(ph)PDTQCSR ddPTM_A459_MK2206_30min_R2 5 IMSCSPDTQCSR 12 0 Q9C0C9;K7EQ12 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 IMS(0.002)CS(0.985)PDT(0.013)QCSR;IMS(0.134)CS(0.866)PDTQCSR;IMS(0.048)CS(0.945)PDT(0.007)QCSR;IMS(0.009)CS(0.903)PDT(0.088)QCSR;IMS(0.121)CS(0.877)PDT(0.001)QCSR 206.46 1.03E-05 139504300 199324 258299 234345 277186 280540 283038 267995 234547 246609 243807 TRUE FALSE 214584.3987 245472.2473 242157.9453 254539.0171 269524.59 293809.2094 232806.9346 265203.0982 268058.6051 235851.5976 0.909828048 1.040791115 1.026738627 1.079233805 1.14277195 1.245737627 0.987090768 1.124449022 1.136556241 1 17.84751985 -4.435811822 0.880757974 1.109545937 0.692592837 0.385619048 0.07175666 3.923195788 1.570206534 0.025103469 1.821901007 3.67E-05 4.435811822 -0.4169531 IMVGS(ph)TDDPSVFSLPDSK ddPTM_A459_MK2206_30min_R1 1 IMVGSTDDPSVFSLPDSK 18 0 O43741 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 IMVGS(0.5)T(0.5)DDPSVFSLPDSK 291.06 8.32E-81 15517000 7025.9 7430.5 7804.3 5810.7 6843.7 6227.2 7839.1 6811.2 7275 6004.2 TRUE FALSE 6428.310311 6946.773099 7274.56586 6258.241121 6571.100937 6579.778683 7316.167942 6751.650396 8031.262284 6748.045625 0.952618086 1.029449634 1.078025589 0.927415354 0.97377838 0.975064344 1.084190645 1.000534195 1.19016123 1 12.72025401 -7.261992341 24.98880795 1.068766036 0.991714686 0.276203979 0.062844615 72.33580798 3268796.153 0.024776749 0.017871642 5.47E-08 7.261992341 -0.07705135 IMVGS(ph)TDDPSVFSLPDSK ddPTM_A459_MK2206_30min_R2 1 IMVGSTDDPSVFSLPDSK 18 0 O43741 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 IMVGS(0.838)T(0.162)DDPSVFSLPDSK 112.67 0.002121 0 9475.6 11382 9141 11494 7668.4 9003.4 10496 5597.9 5996.2 6508.2 TRUE FALSE 10201.05922 10816.78643 9445.756378 10554.90343 7367.300085 9346.030696 9117.862592 6329.56475 6517.738637 6295.837967 1.620286176 1.718085263 1.500317579 1.676489053 1.170185784 1.484477641 1.44823654 1.005356997 1.035245613 1 12.6201827 -7.227039442 0.500450938 0.941940485 1.680811201 0.728394905 0.14135101 0.509053547 0.275619117 0.139363721 0.128849009 5.93E-08 7.227039442 0.738870716 IMVGST(ph)DDPSVFSLPDSK ddPTM_A459_MK2206_30min_R1 1 IMVGSTDDPSVFSLPDSK 18 0 O43741 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 IMVGS(0.039)T(0.96)DDPS(0.001)VFSLPDSK 207.21 4.26E-11 18324000 6093.2 6827.7 7073.5 5292.9 7087.9 5874.3 6881.8 6493.4 6689.6 6079.2 TRUE FALSE 5574.941343 6383.215489 6593.370528 5700.560075 6805.573934 6206.89779 6422.727679 6436.628888 7385.007859 6832.337192 0.815964023 0.93426529 0.96502417 0.834349933 0.996082855 0.908458938 0.940048405 0.942083025 1.080890426 1 12.73816346 -8.120746957 4.557195645 1.039014045 0.917569459 0.453119154 0.054729559 0.202104046 6.423720937 0.03819791 0.01355248 7.57E-09 8.120746957 -0.121444586 INAWNS(ph)PTLPIYEPGLK ddPTM_A459_MK2206_30min_R1 1 INAWNSPTLPIYEPGLK 17 0 O60701;O60701-2;E7ER83;E7ETF4;E7EV97;E7ER95 O60701 UGDH UDP-glucose 6-dehydrogenase 1 INAWNS(0.593)PT(0.406)LPIY(0.001)EPGLK 145.79 0.00045866 5699400 4073.5 3860.1 3975.1 3380.3 3562 3435.7 4153 3942.8 3440 3400 TRUE FALSE 3727.027434 3608.806788 3705.281287 3640.651292 3420.117997 3630.226365 3875.960948 3908.328515 3797.60031 3821.217669 0.975350728 0.944412777 0.969659833 0.952746378 0.895033545 0.950018209 1.014326135 1.02279662 0.993819416 1 11.89981673 -7.248789651 9.233077402 1.009655054 0.946489617 0.650293028 0.021474638 0.153352306 102.0925092 0.008875317 0.006635508 5.64E-08 7.248789651 -0.063165437 INAWNS(ph)PTLPIYEPGLK ddPTM_A459_MK2206_30min_R2 2 INAWNSPTLPIYEPGLK 17 0 O60701;O60701-2;E7ER83;E7ETF4;E7EV97;E7ER95 O60701 UGDH UDP-glucose 6-dehydrogenase 1 INAWNS(0.947)PT(0.053)LPIYEPGLK;INAWNS(0.438)PT(0.384)LPIY(0.178)EPGLK 177.07 9.11E-08 5888700 47899 54564 49803 57535 46323 47140 53080 42754 49642 51606 TRUE FALSE 51566.18427 51854.4311 51463.40716 52834.20645 44504.12627 48933.94573 46110.53224 48342.0946 53959.77143 49922.10045 1.032932986 1.038706918 1.030874236 1.058333002 0.89147143 0.980206067 0.923649683 0.968350573 1.080879429 1 15.60739102 -6.215574013 24.98867642 0.970293785 1.039437344 0.320305976 0.046984607 511.9733215 278936.4737 0.013939255 0.017995455 6.09E-07 6.215574013 0.069143559 INAWNSPT(ph)LPIYEPGLK ddPTM_A459_MK2206_30min_R1 1 INAWNSPTLPIYEPGLK 17 0 O60701;O60701-2;E7ER83;E7ETF4;E7EV97;E7ER95 O60701 UGDH UDP-glucose 6-dehydrogenase 1 INAWNS(0.14)PT(0.86)LPIYEPGLK 190.18 1.74E-07 6749300 6540 6065.4 6781.7 5210 6535.5 5223.5 5989.8 6110.6 4918.4 5223.9 TRUE FALSE 5983.738657 5670.541358 6321.377099 5611.275103 6275.177196 5519.250056 5590.231371 6057.175668 5429.685281 5871.07617 1.01918941 0.965843602 1.076698192 0.955748987 1.068829123 0.940074681 0.952164681 1.031697681 0.924819424 1 12.51940926 -6.782888588 24.99925777 0.970633247 1.014289964 0.213327841 0.045423023 407.8833254 475388.7957 0.015070639 0.013301542 1.65E-07 6.782888588 0.043656717 INFS(ph)DLDQR ddPTM_A459_MK2206_30min_R1 2 INFSDLDQR 9 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 INFS(1)DLDQR;INFS(1)DLDQR 105.65 0.013623 7926600 6070.9 6201.2 6296.5 5102 6068.4 5928.1 6739.3 5740.5 5324.9 5422.3 TRUE FALSE 5554.538075 5797.500753 5869.111123 5494.956924 5826.682778 6263.743899 6289.733594 5690.311414 5878.44241 6094.05546 0.911468252 0.951337051 0.963087908 0.901691322 0.956125657 1.027844912 1.032109674 0.933747888 0.964619119 1 12.57318691 -6.531125973 24.4995298 0.990266285 0.934687219 0.447961536 0.031339336 159.3516266 473370.8078 0.011051487 0.01107066 2.94E-07 6.531125973 -0.055579066 INGTVTENMS(ph)LTDAK ddPTM_A459_MK2206_30min_R1 1 INGTVTENMSLTDAK 15 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 INGTVTENMS(0.799)LT(0.201)DAK 200.33 1.93E-05 5373100 1789.7 1738.3 2163.3 1991.9 1935.3 1605.4 2337.1 1985.2 1721.3 1969.6 TRUE FALSE 1637.476617 1625.136354 2016.461223 2145.316483 1858.212903 1696.296361 2181.196323 1967.843606 1900.235295 2213.608918 0.739731668 0.734156942 0.910938336 0.969148826 0.839449502 0.766303545 0.985357579 0.888975279 0.858433158 1 11.11218465 -5.258848553 24.27616599 0.896609053 0.736944277 0.487061636 0.067684038 127.5461239 1195083.858 0.017661724 0.042467183 5.51E-06 5.258848553 -0.159664776 INHEGEVNR ddPTM_A459_MK2206_30min_R2 1 INHEGEVNR 9 0 E9PC52;Q16576;Q16576-2;Q5JP01;Q09028-3;Q09028;Q09028-4;Q09028-2 E9PC52;Q09028-3 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 0 153.97 0.0013263 16739000 127570 160830 118390 139350 157250 155930 141030 117080 135630 137340 FALSE TRUE 137336.8573 152843.4161 122337.0635 127964.6592 151075.5749 161864.0254 122512.5916 132382.758 147426.8522 132858.607 1.033706888 1.150421636 0.920806459 0.96316424 1.137115451 1.218317947 0.922127624 0.99641838 1.10965225 1 17.01953217 -11.24551747 2.576908516 0.990586358 1.048928363 0.023579095 0.096589956 21567478.28 17205373.55 1309524.526 0.024848769 5.68E-12 11.24551747 0.058342005 INNFS(ph)ADIK ddPTM_A459_MK2206_30min_R2 1 INNFSADIK 9 0 A0A0A0MSQ0;P13797-3;P13797-2;P13797 A0A0A0MSQ0 PLS3 Plastin-3 1 INNFS(1)ADIK 90.793 0.028073 2444600 23183 17748 18761 19690 17991 14634 22170 16697 14125 24627 TRUE FALSE 24957.9083 16866.66013 19386.48238 18081.26401 17284.58294 15190.90712 19259.05237 18879.35523 15353.56697 23823.42301 1.047620583 0.707986427 0.813757216 0.758970028 0.725528944 0.637645863 0.808408278 0.792470302 0.644473591 1 14.5400931 -4.755587259 24.90024835 0.756390699 1.04762108 0.423373108 0.098270976 162.8037661 692642.2341 0.022654449 0.198485342 1.76E-05 4.755587259 0.291230381 INPICNDHYR ddPTM_A459_MK2206_30min_R2 1 INPICNDHYR 10 0 Q96KB5;Q96KB5-2;E5RFX4 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 0 88.056 0.046063 1644900 27415 28220 30771 35122 30342 34399 36640 31087 31168 32709 FALSE TRUE 29513.91348 26818.63584 31796.88978 32252.42025 29150.62062 35708.07805 31829.12399 35150.17764 33878.9363 31641.70801 0.932753487 0.847572319 1.004904342 1.019300862 0.921272032 1.128512975 1.005923068 1.110881171 1.070705042 1 14.94953986 -5.673317079 0.699982813 1.063679659 0.867247247 0.459872819 0.060613313 0.994621219 0.782535658 0.030557591 0.130811115 2.12E-06 5.673317079 -0.196432412 INPPSSGGTS(ph)SSPIK ddPTM_A459_MK2206_30min_R2 1 INPPSSGGTSSSPIK 15 0 A0A0C4DG88;P14859-4;P14859-5;P14859-3;P14859;P14859-2;P14859-6;A0A0A0MT46 A0A0C4DG88 POU2F1 "POU domain protein;POU domain, class 2, transcription factor 1" 1 INPPS(0.01)S(0.041)GGT(0.166)S(0.261)S(0.261)S(0.261)PIK 74.296 0.040845 138380000 24242 24250 26376 21982 24041 19222 26150 18847 20016 30167 TRUE FALSE 26097.98616 23045.78026 27255.36268 20186.00028 23097.02954 19953.50668 22716.47359 21310.36761 21756.9555 29182.65326 0.894297922 0.789708189 0.933957664 0.691712303 0.791464345 0.68374546 0.77842386 0.730240922 0.745544118 1 14.83282344 -5.761775672 24.99999949 0.76030282 0.864359944 0.185723826 0.090418149 12.84561516 955081.6999 0.02298781 0.036631695 1.73E-06 5.761775672 0.104057124 INPPSSGGTSS(ph)SPIK ddPTM_A459_MK2206_30min_R2 1 INPPSSGGTSSSPIK 15 0 A0A0C4DG88;P14859-4;P14859-5;P14859-3;P14859;P14859-2;P14859-6;A0A0A0MT46 A0A0C4DG88 POU2F1 "POU domain protein;POU domain, class 2, transcription factor 1" 1 INPPSSGGT(0.001)S(0.001)S(0.675)S(0.323)PIK 115.83 0.0023287 23227000 41624 40873 39707 37824 41413 35607 47830 38314 37064 35955 TRUE FALSE 44810.76544 38843.30625 41030.81156 34733.65821 39786.91754 36962.04934 41549.86355 43321.77135 40287.75972 34781.79129 1.288339783 1.116771299 1.179663555 0.998616141 1.143900761 1.062683892 1.19458665 1.245530197 1.158300312 1 15.08604461 -7.326588479 24.99762952 1.170065122 1.127675072 0 0.092268653 763.2043265 292837.7104 0.037785143 0.025474739 4.71E-08 7.326588479 -0.04239005 INPPSSGGTSSS(ph)PIK ddPTM_A459_MK2206_30min_R1 4 INPPSSGGTSSSPIK 15 0 A0A0C4DG88;P14859-4;P14859-5;P14859-3;P14859;P14859-2;P14859-6;A0A0A0MT46 A0A0C4DG88 POU2F1 "POU domain protein;POU domain, class 2, transcription factor 1" 1 INPPS(0.001)S(0.003)GGT(0.01)S(0.062)S(0.209)S(0.716)PIK;INPPSSGGTSS(0.031)S(0.969)PIK;INPPSSGGTSS(0.022)S(0.978)PIK;INPPSSGGT(0.001)S(0.063)S(0.214)S(0.722)PIK 242.93 2.35E-20 184607000 14485.4 16581.7 16200.9 13352.1 13079.7 12301.3 13658.5 12981.2 14592.4 13034.4 TRUE FALSE 13253.34066 15502.22832 15101.22805 14380.48106 12558.70785 12997.78898 12747.36639 12867.70674 16109.3322 14649.19988 0.904714304 1.058230378 1.03085685 0.981656416 0.857296505 0.88726955 0.870174924 0.878389731 1.099673179 1 13.83853425 -4.433615737 14.09238292 0.954683841 2.08E-05 0.035130626 0.082047989 603569.1744 1828963.983 0.021845332 17378776.01 3.68E-05 4.433615737 -0.95466304 INPPSSGGTSSS(ph)PIK ddPTM_A459_MK2206_30min_R2 4 INPPSSGGTSSSPIK 15 0 A0A0C4DG88;P14859-4;P14859-5;P14859-3;P14859;P14859-2;P14859-6;A0A0A0MT46 A0A0C4DG88 POU2F1 "POU domain protein;POU domain, class 2, transcription factor 1" 1 INPPSSGGT(0.001)S(0.017)S(0.065)S(0.917)PIK;INPPS(0.059)S(0.018)GGT(0.059)S(0.059)S(0.19)S(0.616)PIK;INPPS(0.057)S(0.03)GGT(0.017)S(0.056)S(0.19)S(0.65)PIK;INPPSSGGT(0.004)S(0.004)S(0.375)S(0.617)PIK 174.21 2.71E-05 170318000 110504 121164 112203 118605 107617 90778.2 125582 97170 95530 125561 TRUE FALSE 118964.2712 115147.1719 115943.792 108914.5921 103391.4158 94232.82801 109092.9325 109870.4526 103839.0267 121463.9549 0.979420367 0.947994589 0.954553078 0.896682413 0.851210682 0.775808989 0.898150671 0.904551912 0.854895815 1 16.89016872 -5.832000016 3.138736206 0.871683965 0.961343721 0.301256203 0.053563545 0.28024625 5.557349407 0.01552967 0.025570817 1.47E-06 5.832000016 0.089659756 INPYMS(ph)SPCHIEMILTEK ddPTM_A459_MK2206_30min_R1 3 INPYMSSPCHIEMILTEK 18 0 A0A087WXM6;J3QQT2;J3KRX5;A0A0A6YYL6;P18621;P18621-3;J3QLC8;A0A0A0MRF8;P18621-2 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 1 INPYMS(0.943)S(0.057)PCHIEMILTEK;INPY(0.001)MS(0.966)S(0.032)PCHIEMILTEK;INPY(0.24)MS(0.38)S(0.38)PCHIEMILTEK 128.95 0.00043274 174679500 21738.7 19870.9 22859.1 17867.1 24626.4 21168.1 23203.9 22245.6 18523.8 15136.8 TRUE FALSE 19889.70941 18577.3008 21307.48798 19243.22714 23645.47834 22366.61953 21656.01017 22051.10906 20449.4153 17012.06106 1.169153422 1.092007649 1.252493034 1.131152014 1.389924375 1.31475072 1.272979805 1.296204439 1.202053956 1 14.05427032 -6.209964267 24.99990174 1.265584085 1.162779901 0.121960979 0.103701153 586.5136385 284851.5471 0.029089449 0.037554272 6.17E-07 6.209964267 -0.102804184 INPYMS(ph)SPCHIEMILTEK ddPTM_A459_MK2206_30min_R2 3 INPYMSSPCHIEMILTEK 18 0 A0A087WXM6;J3QQT2;J3KRX5;A0A0A6YYL6;P18621;P18621-3;J3QLC8;A0A0A0MRF8;P18621-2 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 1 INPY(0.003)MS(0.603)S(0.394)PCHIEMILTEK;INPY(0.065)MS(0.564)S(0.371)PCHIEMILTEK;INPY(0.087)MS(0.456)S(0.456)PCHIEMILTEK 94.61 0.0078617 25132200 103977 148093 122301 165290 158986 150688 173350 129599 135714 152642 TRUE FALSE 111937.5591 140738.917 126378.4543 151785.2783 152743.4108 156422.5374 150588.9368 146538.0343 147518.1584 147661.304 0.758069691 0.95311983 0.855867115 1.027928605 1.034417323 1.059333306 1.019826675 0.992392931 0.999030581 1 17.17193228 -3.775261228 0.671592889 1.021221847 6.50E-10 0.734747048 0.045613608 5.523298328 0.684208088 0.019349 5.875511932 0.000167779 3.775261228 -1.021221846 INS(ph)SPNVNTTASGVEDLNIIQVTIPDDDNER ddPTM_A459_MK2206_30min_R1 1 INSSPNVNTTASGVEDLNIIQVTIPDDDNER 31 0 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347 A0A494C1K3 GTF2I General transcription factor II-I 1 INS(0.498)S(0.498)PNVNT(0.002)T(0.002)ASGVEDLNIIQVTIPDDDNER 122.9 1.21E-16 6575600 388.73 493.24 668.45 504.08 610.88 734.57 490.14 453.2 868.5 528.77 TRUE FALSE 355.6664722 461.1299863 623.0774764 542.9043289 586.547356 776.1607186 457.4436549 449.2377202 958.783683 594.2780196 0.598484986 0.775949928 1.048461252 0.913552767 0.986991503 1.306056581 0.769746886 0.755938644 1.613358817 1 9.214994211 -4.403718161 0.864926995 1.051250516 4.29E-14 0.281000183 0.239609553 5.644645187 2.100749033 0.083467249 6.575266545 3.95E-05 4.403718161 -1.051250516 INSS(ph)PNVNTTASGVEDLNIIQVTIPDDDNER ddPTM_A459_MK2206_30min_R1 1 INSSPNVNTTASGVEDLNIIQVTIPDDDNER 31 0 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347 A0A494C1K3 GTF2I General transcription factor II-I 1 INS(0.265)S(0.734)PNVNT(0.001)TASGVEDLNIIQVTIPDDDNER 178.04 7.12E-34 7343100 709.19 917.77 674.22 685.75 726.9 711.58 777.47 515.81 569.67 777.09 TRUE FALSE 648.8696664 858.0230062 628.4558249 738.5665838 697.9460338 751.8690447 725.6063949 511.3003276 628.8892351 873.3617759 0.742956338 0.982437095 0.719582471 0.845659387 0.799148821 0.860890716 0.830819959 0.585439324 0.720078726 1 9.77043558 INSSGES(ph)GDESDEFLQSR ddPTM_A459_MK2206_30min_R1 1 INSSGESGDESDEFLQSR 18 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 INSSGES(0.998)GDES(0.002)DEFLQSR 290.67 8.87E-81 4647900 347.26 482.3 481.16 495.05 666.1 644.95 617.08 487.95 475 320.18 TRUE FALSE 317.7237135 450.9021823 448.5001998 533.1788368 639.5678265 681.4665116 575.9157191 483.6839046 524.3779498 359.8463156 0.8829428 1.253040987 1.246365963 1.481684857 1.777336042 1.893770985 1.60044912 1.344140216 1.457227508 1 8.491237077 -5.114951874 1.230875439 1.549611378 0.838629202 0.374611186 0.238767413 0.901551884 1.746404084 0.077363096 0.703476083 7.67E-06 5.114951874 -0.710982176 INSSGES(ph)GDESDEFLQSR ddPTM_A459_MK2206_30min_R2 1 INSSGESGDESDEFLQSR 18 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 INSSGES(0.998)GDES(0.002)DEFLQSR 216.61 3.58E-14 3259800 7049.8 7410.7 5736.7 8327 9678.4 8360.3 8870 8569.9 8316.8 8028.3 TRUE FALSE 7589.538108 7042.695414 5927.958715 7646.657463 9298.377386 8678.457075 7705.358345 9690.015355 9040.180231 7766.337228 0.977235199 0.906823282 0.763288863 0.984589935 1.197266757 1.117445305 0.992148309 1.247694385 1.164021078 1 12.92301864 -6.032099847 5.607489785 1.123862032 0.882387797 0.593090577 0.088896151 0.126043923 11.46685335 0.026452268 0.035811063 9.29E-07 6.032099847 -0.241474235 IPAVTLAVTSVAGS(ph)PAR ddPTM_A459_MK2206_30min_R1 2 IPAVTLAVTSVAGSPAR 17 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 IPAVT(0.001)LAVT(0.007)S(0.062)VAGS(0.93)PAR;IPAVTLAVTSVAGS(1)PAR 200.9 4.89E-08 25416000 1101.1 1099.71 1174.24 1094.74 911.22 1118.31 1406.78 1041.75 1147.17 909.73 TRUE FALSE 1007.445663 1028.118679 1094.53586 1179.057064 874.9241779 1181.627746 1312.936273 1032.64209 1266.422427 1022.434221 0.985340321 1.00555973 1.070519588 1.15318623 0.855726618 1.155700506 1.284127865 1.009983888 1.238634624 1 9.997792313 IPAVTLAVTSVAGS(ph)PAR ddPTM_A459_MK2206_30min_R2 1 IPAVTLAVTSVAGSPAR 17 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 IPAVTLAVT(0.004)S(0.026)VAGS(0.97)PAR 113.81 0.0017788 6337600 1207.5 3549 939.87 2472.6 3221.3 2559 1176.1 1080.1 1133.7 801.22 TRUE FALSE 1299.947128 3372.761821 971.2047967 2270.580671 3094.815576 2656.384538 1021.676657 1221.272779 1232.307177 775.076257 1.677186105 4.351522563 1.253044185 2.92949326 3.992917533 3.427255724 1.318162759 1.575680802 1.589917335 1 9.598194449 -7.26955827 24.70663957 1.418913496 2.973692534 0.422895382 0.895875326 534.8719725 1627664.095 0.366599565 0.252063618 5.38E-08 7.26955827 1.554779038 IPCES(ph)PPLEVVDTTASTK ddPTM_A459_MK2206_30min_R1 1 IPCESPPLEVVDTTASTK 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCES(1)PPLEVVDTTASTK 78.78 0.012647 6257800 1923.7 1987.6 1936.7 1081.9 1421.5 1998.9 1370.9 1462.8 2246.8 1698.5 TRUE FALSE 1760.079213 1858.206879 1805.2422 1165.228125 1364.878645 2112.075991 1279.449762 1450.010894 2480.3629 1908.923003 0.922027348 0.973432074 0.945686231 0.610411276 0.714999318 1.10642283 0.67024692 0.759596323 1.299351989 1 10.8985432 -8.253313309 24.97855013 1.149676002 0.837655516 0.378853451 0.159708984 570.1166706 1752482.432 0.114187194 0.041493109 5.58E-09 8.253313309 -0.312020486 IPCES(ph)PPLEVVDTTASTK ddPTM_A459_MK2206_30min_R2 2 IPCESPPLEVVDTTASTK 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCES(1)PPLEVVDTTASTK;IPCES(0.995)PPLEVVDT(0.003)T(0.003)ASTK 116.51 0.0010681 4126300 46531 43823 29736.7 43265 28663.2 30365 74194 72954 23698.8 33703 TRUE FALSE 50093.44914 41646.81354 30728.10674 39730.1111 27537.73875 31520.56135 64452.23868 82489.33829 25760.07879 32603.27387 1.53645457 1.277381336 0.942485312 1.218592687 0.84463109 0.966791295 1.976864009 2.530093714 0.790107119 1 14.99272922 -7.254006473 24.83140765 1.701774023 1.120095413 0.143362416 0.492355066 763.3278494 2550084.862 0.187400104 0.142194561 5.57E-08 7.254006473 -0.581678609 IPCKS(ph)PPPELTDTATSTK ddPTM_A459_MK2206_30min_R1 1 IPCKSPPPELTDTATSTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(1)PPPELTDTATSTK 108.28 0.00084174 16922000 2705.4 3121 2407.6 2244.3 1954 2063.7 1749.6 2044.1 2298.6 1895.1 TRUE FALSE 2475.291523 2917.822333 2244.17882 2417.156375 1876.168042 2180.544911 1632.887376 2026.228649 2537.547696 2129.879295 1.162174556 1.369947273 1.05366479 1.134879512 0.880879985 1.023788022 0.766657237 0.951334967 1.191404462 1 11.05655596 -5.694591415 1.539986502 0.962575368 1.261365219 0.426053351 0.123058915 0.363541129 1.722750954 0.039169659 0.096146873 2.02E-06 5.694591415 0.29878985 IPCKS(ph)PPPELTDTATSTK ddPTM_A459_MK2206_30min_R2 2 IPCKSPPPELTDTATSTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(1)PPPELTDTATSTK;IPCKS(1)PPPELTDTATSTK 90.193 0.0032111 32942000 60454 52490 50104 64954 45419 38011 79846 62475 29528 43576 TRUE FALSE 65082.40472 49883.42293 51774.44235 59647.05042 43635.62185 39457.53524 69362.12429 70640.69701 32096.29207 42154.11869 1.543915678 1.183358222 1.228217882 1.414975625 1.035144921 0.936030368 1.645441215 1.675772124 0.761403466 1 15.36338598 -4.755193853 24.42783637 1.23676917 1.543916361 0.104283912 0.284173929 413.3869382 1616650.651 0.07110737 0.639546547 1.76E-05 4.755193853 0.307147191 IPCKS(ph)PPPELTDTATSTKR ddPTM_A459_MK2206_30min_R2 1 IPCKSPPPELTDTATSTKR 19 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(0.998)PPPELT(0.002)DTATSTKR 54.004 0.024464 6921600 32827 37757 24173 49110 30698 23811 49840 30299 25922 22023 TRUE FALSE 35340.26036 35882.04228 24978.91576 45097.5559 29492.64227 24717.14429 43295.94813 34259.18333 28176.6487 21304.39131 1.658825161 1.68425569 1.172477326 2.116819732 1.384345689 1.160190119 2.032254642 1.608080833 1.322574688 1 14.37886321 -8.528736521 2.985458636 1.002837044 1.598764455 0.289254727 0.298096823 0.311436272 6.959605056 0.281254418 0.075080037 2.96E-09 8.528736521 0.595927412 IPCKS(ph)SPELEDTATSSK ddPTM_A459_MK2206_30min_R1 1 IPCKSSPELEDTATSSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(0.656)S(0.344)PELEDTATSSK 77.13 0.011126 25112000 2773.5 3328.7 2658.3 2008.1 1939 2053.4 1657.5 2465.3 2086.8 1496.4 TRUE FALSE 2537.599261 3112.001025 2477.862002 2162.76421 1861.765524 2169.661733 1546.931199 2443.746142 2303.730328 1681.785329 1.508872278 1.850415134 1.473352133 1.285993029 1.107017341 1.290094339 0.919814897 1.453066631 1.369812358 1 10.71577785 -5.641549774 2.718356238 1.205504879 1.680036356 0.560558327 0.17163157 0.191626732 2.843273284 0.04854786 0.096004832 2.28E-06 5.641549774 0.474531477 IPDWFLNR ddPTM_A459_MK2206_30min_R2 2 IPDWFLNR 8 0 P62269;J3JS69 P62269 RPS18 40S ribosomal protein S18 0 ; 161.68 0.0054757 5759400 15204.1 17769 15726.5 17477.5 14185.9 16182.4 19246.3 16121.9 15579.4 16877.7 FALSE TRUE 16368.13759 16886.6173 16250.81366 16049.53234 13628.89029 16798.23257 16719.23769 18229.08768 16934.46805 16326.98203 1.002520708 1.034276712 0.995334816 0.983006676 0.83474645 1.028863298 1.024024995 1.11650075 1.03720749 1 13.99497052 -6.982745879 24.99991241 1.050184958 0.971294207 0.284896799 0.056631604 318.980571 462177.1306 0.021104682 0.018607969 1.04E-07 6.982745879 -0.078890752 IPEINSSDMSAHVTS(ph)PSGR ddPTM_A459_MK2206_30min_R1 1 IPEINSSDMSAHVTSPSGR 19 0 O75369-8;O75369-2;O75369-9;O75369;E7EN95;O75369-7 O75369-8 FLNB Filamin-B 1 IPEINSSDMS(0.003)AHVT(0.36)S(0.519)PS(0.119)GR 77.543 0.0053182 3479500 1214.9 970.06 1090.7 972.52 878.01 938.82 989.97 756.05 883.69 851.05 TRUE FALSE 1111.566375 906.9089177 1016.666323 1047.423659 843.0370025 991.9751771 923.9309076 749.4399346 975.5527378 956.4844991 1.162137365 0.948168965 1.062919811 1.09507646 0.881391181 1.037105335 0.965965375 0.783535891 1.019935753 1 9.901597778 -6.25397147 24.82266185 0.94252036 1.058285472 0.317566154 0.084906889 673.0238388 2237068.31 0.024902916 0.03151233 5.57E-07 6.25397147 0.115765112 IPEISIQDMTAQVT(ph)SPSGK ddPTM_A459_MK2206_30min_R2 1 IPEISIQDMTAQVTSPSGK 19 0 P21333-2;P21333;Q60FE5 P21333-2 FLNA Filamin-A 1 IPEISIQDMTAQVT(0.665)S(0.334)PS(0.001)GK 129.42 0.00072102 8764300 17906 22725 18227 22568 18139 17379 21310 19215 16982 18005 TRUE FALSE 19276.89713 21596.50955 18834.67908 20724.12221 17426.77172 18040.37002 18511.9714 21726.46647 18459.06366 17417.49832 1.106754642 1.239931771 1.081365345 1.189844938 1.000532418 1.035761261 1.062837559 1.247393057 1.059799939 1 14.0882498 -6.239395227 24.96921235 1.078248219 1.155356228 0.226701817 0.077029046 1433.766471 1624014.845 0.02332492 0.030087593 5.76E-07 6.239395227 0.07710801 IPEISIQDMTAQVTS(ph)PSGK ddPTM_A459_MK2206_30min_R1 2 IPEISIQDMTAQVTSPSGK 19 0 P21333-2;P21333;Q60FE5 P21333-2 FLNA Filamin-A 1 IPEISIQDMTAQVT(0.218)S(0.781)PS(0.001)GK;IPEISIQDMTAQVT(0.084)S(0.915)PS(0.001)GK 225.86 9.57E-21 28567000 7168.4 6906.9 6769 6211.2 6262.5 5420.7 6236.6 5994.9 6770.9 6680.2 TRUE FALSE 6558.689937 6457.259555 6309.53914 6689.5877 6013.051364 5727.61535 5820.567793 5942.487221 7474.759285 7507.793609 0.873584208 0.860074196 0.840398587 0.891019126 0.80090792 0.762889292 0.775270086 0.791509134 0.995599996 1 12.87417328 -8.268534701 24.69327514 0.997800048 0.823917228 0.747620764 0.040284965 280.0369818 974573.9566 0.041164069 0.011534124 5.39E-09 8.268534701 -0.17388282 IPEISIQDMTAQVTS(ph)PSGK ddPTM_A459_MK2206_30min_R2 1 IPEISIQDMTAQVTSPSGK 19 0 P21333-2;P21333;Q60FE5 P21333-2 FLNA Filamin-A 1 IPEISIQDMTAQVT(0.001)S(0.998)PS(0.001)GK 282.41 8.37E-72 9542000 59984 61087 53288 57962 56868 46113 56376 51619 46474 50240 TRUE FALSE 64576.42116 58053.50841 55064.59532 53226.31919 54635.07658 47867.86253 48973.76348 58365.78053 50516.22451 48600.67291 1.328714548 1.194500095 1.133000677 1.095176589 1.124162965 0.984921806 1.007676654 1.200925358 1.039414096 1 15.56868867 -3.285433557 0.626865389 1.060003305 2.928059141 0.665967691 0.059891025 12.15255874 0.822298489 0.027150635 24.74253743 0.000518282 3.285433557 1.868055836 IPEPES(ph)PAKPNVPTASTAPPADSR ddPTM_A459_MK2206_30min_R1 2 IPEPESPAKPNVPTASTAPPADSR 24 1 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 IPEPES(0.869)PAKPNVPT(0.043)AS(0.058)T(0.026)APPADS(0.005)R;IPEPES(0.974)PAKPNVPT(0.009)AS(0.012)T(0.005)APPADSR 71.202 0.00069379 42079000 3010.1 3103.4 2980.3 2674.7 2368.9 1795.55 2767.2 2377.36 2448.5 3160.2 TRUE FALSE 2754.075188 2901.368096 2778.00554 2880.705857 2274.541697 1897.212489 2582.605137 2356.574992 2703.030337 3551.709434 0.775422438 0.816893428 0.782160138 0.811075881 0.640407595 0.534168835 0.727144262 0.663504444 0.761050527 1 11.79429784 -8.562026022 19.10845948 1.000000003 0.718397981 0.505930993 0.082897904 621.351582 303293.3384 0.089833024 0.023194787 2.74E-09 8.562026022 -0.281602021 IPEPES(ph)PAKPNVPTASTAPPADSR ddPTM_A459_MK2206_30min_R2 4 IPEPESPAKPNVPTASTAPPADSR 24 1 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 IPEPES(0.916)PAKPNVPT(0.009)AS(0.032)T(0.032)APPADS(0.01)R;IPEPES(1)PAKPNVPTASTAPPADSR;IPEPES(0.988)PAKPNVPT(0.005)AS(0.004)T(0.004)APPADSR;IPEPES(0.988)PAKPNVPT(0.002)AS(0.004)T(0.005)APPADS(0.001)R 74.703 0.00024562 79067000 168275 148829 143794 139282 122839 106391 169167 115206 111353 163531 TRUE FALSE 181158.2634 141438.3683 148588.0202 127902.2151 118015.7236 110439.7841 146955.1697 130263.8198 121038.2827 158194.9969 1.145157982 0.894076115 0.939271299 0.808509862 0.746014261 0.69812438 0.928949541 0.823438303 0.765120801 1 17.27134445 -3.450402266 0.930655915 0.81782852 4.360408737 0.520946476 0.088390709 15.92331893 1.513991353 0.028824641 98.76112603 0.000354485 3.450402266 3.542580218 IPEPS(ph)PVTR ddPTM_A459_MK2206_30min_R2 1 IPEPSPVTR 9 0 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;Q7Z4S6-3;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 IPEPS(0.999)PVT(0.001)R 88.134 0.031598 5166800 35337 30671 35105 29196 25009 29281 36558 29425 20997 36575 TRUE FALSE 38042.42789 29147.92274 36275.38318 26810.59341 24027.021 30395.30897 31757.89069 33270.94853 22823.28111 35381.56075 1.075204911 0.82381676 1.02526238 0.757756098 0.67908313 0.859072023 0.897583092 0.940347114 0.645061456 1 15.11071007 -5.761938112 24.9999949 0.82136642 0.959666893 0.240891408 0.120323897 20.48962106 1027184.479 0.032904493 0.052365099 1.73E-06 5.761938112 0.138300473 IPESETESTASAPNS(ph)PR ddPTM_A459_MK2206_30min_R2 1 IPESETESTASAPNSPR 17 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 IPESETESTASAPNS(1)PR 194.67 9.08E-08 6713000 1358.5 2070.6 2079.8 4740.5 3246.8 3708.3 1180.6 1030 1363.8 1399.6 TRUE FALSE 1462.507805 1967.777015 2149.139494 4353.185986 3119.314318 3849.421955 1025.585802 1164.624537 1482.420859 1353.931167 1.080193617 1.453380396 1.587332907 3.215219572 2.303894315 2.843144504 0.757487402 0.860180019 1.0949012 1 10.40293868 -7.280840893 24.8663891 0.916490361 2.091332886 0.467823843 0.602011956 779.7491111 999378.7981 0.277977164 0.187730442 5.24E-08 7.280840893 1.174842526 IPETS(ph)LDCLENTLGVEEQR ddPTM_A459_MK2206_30min_R1 1 IPETSLDCLENTLGVEEQR 19 0 Q6XZF7 Q6XZF7 DNMBP Dynamin-binding protein 1 IPET(0.198)S(0.802)LDCLENTLGVEEQR 100.45 0.0030863 0 397.02 206.24 273.48 293.01 299.22 268.18 167.03 262.27 295.26 379.07 TRUE FALSE 363.2513642 192.8137385 254.9169396 315.577681 287.3014338 283.3641198 155.8877335 259.977001 325.9533336 426.0320534 0.852638578 0.452580356 0.59835155 0.740736943 0.67436577 0.665123944 0.365906115 0.610228735 0.765091103 1 8.734818169 -8.574531798 2.882562143 0.998934241 0.613461722 0.450145641 0.129444621 0.267928406 5.58657721 0.124994 0.033416757 2.66E-09 8.574531798 -0.385472519 IPEVPLHDT(ph)PER ddPTM_A459_MK2206_30min_R2 1 IPEVPLHDTPER 12 0 Q96AY2;Q96AY2-2 Q96AY2 EME1 Crossover junction endonuclease EME1 1 IPEVPLHDT(1)PER 91.657 0.030827 3420000 8611.1 10467 9993 9913.6 9428.8 8128.2 9881.9 8084.7 9596 7946.9 TRUE FALSE 9270.372437 9947.224 10326.16163 9103.627168 9058.577936 8437.524347 8584.39466 9141.398049 10430.64273 7687.593304 1.20588747 1.293932133 1.343224235 1.184197291 1.1783373 1.097550822 1.116655671 1.189110517 1.356815107 1 12.9083163 -5.896028541 6.457057673 1.162750822 1.28171164 0.275787171 0.090112025 0.293938423 15.98447521 0.025591115 0.0382828 1.27E-06 5.896028541 0.118960818 IPGGNIYIS(ph)PLK ddPTM_A459_MK2206_30min_R1 2 IPGGNIYISPLK 12 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 IPGGNIYIS(1)PLK;IPGGNIYIS(1)PLK 126.56 0.002717 34241000 3206.6 2987.29 3305.7 2436.98 2184.39 2148.88 2655.24 2451.65 4052 3942.5 TRUE FALSE 2933.861831 2792.816878 3081.318294 2624.676622 2097.381121 2270.547729 2478.113784 2430.215483 4473.2199 4430.926664 0.662132789 0.630300858 0.695411711 0.592353885 0.473350448 0.512431801 0.559276642 0.548466645 1.009545009 1 12.11339273 -8.263878568 24.99597318 1.004772577 0.582809984 0.876066478 0.063270095 78.32487075 802620.407 0.05998128 0.018297046 5.45E-09 8.263878568 -0.421962593 IPGGNIYIS(ph)PLK ddPTM_A459_MK2206_30min_R2 2 IPGGNIYISPLK 12 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 IPGGNIYIS(1)PLK;IPGGNIYIS(1)PLK 143.64 0.00080925 34602000 119616 83084 82482 82870 70737 53680 102252 77903 53609 101409 TRUE FALSE 128773.8929 78958.16938 85231.90871 76099.25591 67959.50996 55722.83002 88826.18957 88085.18958 58271.81392 98100.03264 1.31267941 0.804874038 0.868826507 0.775731199 0.692757261 0.568020504 0.905465444 0.897911929 0.594004022 1 16.581966 -4.757935165 5.067608663 0.780186364 1.347195802 0.58684171 0.131570467 0.123685332 8.517531348 0.032634037 0.25058122 1.75E-05 4.757935165 0.567009437 IPGGNIYIS(ph)PLKS(ph)PYK ddPTM_A459_MK2206_30min_R2 1 IPGGNIYISPLKSPYK 16 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 IPGGNIY(0.03)IS(0.97)PLKS(1)PYK 81.967 0.035211 0 41226 38037 41320 27777 33227 19698 36195 35522 23141 41795 TRUE FALSE 44382.29426 36148.13789 42697.58818 25507.53025 31922.34103 20447.62119 31442.55302 40164.84737 25153.76235 40431.23257 1.097723009 0.894064702 1.056054576 0.630886783 0.789546571 0.50573826 0.777679804 0.9934114 0.622136916 1 15.30318257 -5.751878887 24.99979489 0.751023964 1.003759209 0.365012467 0.154188886 219.1443148 573036.1807 0.041341678 0.070444362 1.77E-06 5.751878887 0.252735245 IPGGNIYIS(ph)PLKSPYK ddPTM_A459_MK2206_30min_R1 1 IPGGNIYISPLKSPYK 16 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 IPGGNIY(0.016)IS(0.976)PLKS(0.008)PYK 64.83 0.031523 37542000 4227.2 4301.5 4573.7 3571.1 4877.7 4073.4 4816 3957.4 4084 3867.8 TRUE FALSE 3867.654442 4021.471568 4263.249987 3846.146741 4683.41088 4304.032388 4494.733427 3922.800869 4508.546415 4346.972264 0.889735247 0.925120135 0.980740094 0.884787504 1.077396081 0.990121889 1.033991743 0.902421417 1.037169354 1 12.08579518 -6.244620364 24.97943174 1.00249183 0.924786371 0.427307622 0.04892664 892.6576719 1325765.724 0.014260623 0.018364291 5.69E-07 6.244620364 -0.077705459 IPGS(ph)PPESMGR ddPTM_A459_MK2206_30min_R1 1 IPGSPPESMGR 11 0 P50395-2;P50395;Q5SX87;V9GYJ7;V9GYF8;Q5SX90;Q5SX86 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 1 IPGS(0.986)PPES(0.014)MGR 108.98 0.0096569 13166000 1421.1 1560.4 1567.8 1200.5 1724 1375.5 1497.2 1346.4 1266.6 1672.8 TRUE FALSE 1300.227983 1458.817676 1461.382104 1292.962718 1655.329429 1453.379621 1397.32452 1334.628567 1398.267603 1880.039093 0.691596248 0.775950714 0.777314743 0.687731826 0.880476069 0.773058192 0.743242268 0.70989405 0.743743898 1 10.87654695 -10.51980527 4.45091966 1.000008086 0.755785055 0.661892265 0.052797852 12210372.43 5771874.147 936.8063052 0.012830461 3.02E-11 10.51980527 -0.244223031 IPGTPGAGGRLS(ph)PENNQVLTK ddPTM_A459_MK2206_30min_R1 2 IPGTPGAGGRLSPENNQVLTK 21 1 Q16514-2;Q16514 Q16514-2 TAF12 Transcription initiation factor TFIID subunit 12 1 IPGT(0.029)PGAGGRLS(0.969)PENNQVLT(0.002)K;IPGT(0.009)PGAGGRLS(0.987)PENNQVLT(0.004)K 77.894 0.0013819 180521000 6565.4 6548.6 6911.4 6408.9 6770.5 6012.3 6317.5 6560.2 5257.8 4546.9 TRUE FALSE 6006.978254 6122.28495 6442.273424 6902.514588 6500.816648 6352.71123 5896.071102 6502.844863 5804.367125 5110.204299 1.175486909 1.198050918 1.260668468 1.350731631 1.272124609 1.24314232 1.153783833 1.272521504 1.135838566 1 12.31916525 -8.786799612 0.94680998 0.998427418 1.248118391 0.648342563 0.05473422 0.64349181 1.103071653 0.056773325 0.01877008 1.63E-09 8.786799612 0.249690973 IPGTPGAGGRLS(ph)PENNQVLTK ddPTM_A459_MK2206_30min_R2 2 IPGTPGAGGRLSPENNQVLTK 21 1 Q16514-2;Q16514 Q16514-2 TAF12 Transcription initiation factor TFIID subunit 12 1 IPGT(0.001)PGAGGRLS(0.999)PENNQVLT(0.001)K;IPGTPGAGGRLS(0.999)PENNQVLT(0.001)K 58.848 0.013203 125152000 60935 102405 81409 89385 104525 94597 94310 82320 89759 77887 TRUE FALSE 65600.23045 97319.71661 84123.13543 82081.95957 100420.8233 98196.95512 81926.98371 93079.50665 97566.07557 75345.55357 0.870658285 1.29164512 1.116497676 1.089406815 1.332803577 1.303287991 1.087349947 1.235368276 1.294914842 1 16.20123475 -4.751539461 24.86251267 1.200579281 0.87065757 0.441783124 0.109048983 351.7359705 883279.3032 0.026556624 0.346189121 1.77E-05 4.751539461 -0.329921711 IPLY(ph)S(ph)FSMVLVDK ddPTM_A459_MK2206_30min_R2 1 IPLYSFSMVLVDK 13 0 P78539-3;P78539-5;P78539-2;P78539 P78539-3 SRPX Sushi repeat-containing protein SRPX 2 IPLY(0.998)S(0.501)FS(0.501)MVLVDK 78.548 0.034052 0 14626 15314 14491 12939 14392 10406 14755 15571 9953.4 12855 TRUE FALSE 15745.77781 14553.52903 14974.12271 11881.84231 13826.89777 10802.00762 12817.65078 17606.18316 10819.12874 12435.5424 1.266191477 1.170317189 1.20413909 0.955474391 1.111885378 0.868639845 1.030727118 1.415795354 0.870016634 1 13.60218181 -5.726891422 18.19742059 1.049361825 1.209232747 0.228154417 0.148118608 17.3788534 9151.026268 0.040290198 0.069749466 1.88E-06 5.726891422 0.159870922 IPMPPS(ph)SPQPR ddPTM_A459_MK2206_30min_R1 2 IPMPPSSPQPR 11 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 IPMPPS(0.5)S(0.5)PQPR;IPMPPS(0.5)S(0.5)PQPR 117.14 0.0056861 8753200 3597.2 3780 3577.1 2827.1 3370.2 2453.6 3055.7 2632.9 2602.4 2958.9 TRUE FALSE 3291.23925 3533.921313 3334.296418 3044.843732 3235.957797 2592.520712 2851.859828 2609.880833 2872.928793 3325.470871 0.989706234 1.062682986 1.002653924 0.915612811 0.973082587 0.779595075 0.857580758 0.784815424 0.863916391 1 11.69934292 -6.162705762 1.268352968 0.847830452 1.026619573 0.473720366 0.067364759 0.33894051 1.10899103 0.025006405 0.039582669 6.88E-07 6.162705762 0.178789121 IPMPPS(ph)SPQPR ddPTM_A459_MK2206_30min_R2 2 IPMPPSSPQPR 11 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 IPMPPS(0.5)S(0.5)PQPR;IPMPPS(0.5)S(0.5)PQPR 124.39 0.0035881 9752900 30177 34933 31456 31711 32563 25422 31995 21586.6 25524 26620 TRUE FALSE 32487.37432 33198.27802 32504.72734 29120.10986 31284.413 26389.45202 27794.01807 24408.04274 27744.03138 25751.39158 1.261577427 1.289183845 1.262251294 1.130816941 1.214863007 1.024777707 1.079321014 0.947833932 1.077379888 1 14.65236278 -6.428107932 0.78128872 1.004817475 1.288391246 0.801925885 0.051485012 0.267382324 0.360660139 0.029117542 0.041059422 3.73E-07 6.428107932 0.283573771 IPMTPTSSFVSPPPPT(ph)ASPHSNR ddPTM_A459_MK2206_30min_R2 3 IPMTPTSSFVSPPPPTASPHSNR 23 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 IPMTPTSSFVSPPPPT(0.752)AS(0.222)PHS(0.026)NR;IPMTPTSSFVSPPPPT(0.467)AS(0.467)PHS(0.067)NR;IPMTPTSSFVSPPPPT(0.815)AS(0.17)PHS(0.015)NR 111.72 1.93E-05 41061300 40523.5 40232.5 34117.8 36850 35984.8 33851.5 43776.3 30113.7 29582 39077.3 TRUE FALSE 43626.01032 38234.61255 35255.27042 33839.23712 34571.85594 35139.74255 38028.41923 34049.66399 32154.98889 37802.2109 1.154059757 1.011438528 0.932624563 0.895165556 0.914545872 0.929568449 1.005983997 0.900732078 0.85061133 1 15.20618299 -4.814653721 1.970623466 0.925726244 1.212667355 0.712274295 0.044050388 0.380009876 1.703887833 0.012132089 0.1962531 1.53E-05 4.814653721 0.286941112 IPMTPTSSFVSPPPPTAS(ph)PHSNR ddPTM_A459_MK2206_30min_R2 1 IPMTPTSSFVSPPPPTASPHSNR 23 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 IPMTPTSSFVSPPPPT(0.088)AS(0.824)PHS(0.088)NR 132.37 4.64E-06 40680000 26969 23080 18617 24933 22347 22304 27438 20393 15901 22124 TRUE FALSE 29033.76738 21933.88076 19237.68149 22895.89414 21469.5445 23152.79435 23835.35764 23058.43512 17284.04024 21402.09569 1.356585252 1.024847336 0.898869053 1.069796831 1.003151505 1.081800338 1.113692696 1.07739146 0.807586345 1 14.38546445 -4.762381751 6.770918067 1.014338071 1.364735848 0.58280743 0.088254716 0.082631874 20.02041613 0.022045667 0.133750337 1.73E-05 4.762381751 0.350397777 IPMTPTSSFVSPPPPTASPHS(ph)NR ddPTM_A459_MK2206_30min_R1 1 IPMTPTSSFVSPPPPTASPHSNR 23 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 IPMTPTSSFVSPPPPT(0.104)AS(0.366)PHS(0.53)NR 104.14 1.64E-05 56156000 3048.8 3251.8 3058.6 2045.1 2391.1 2611.4 3186.2 2254 3263.5 3807.6 TRUE FALSE 2789.48355 3040.107229 2850.990754 2202.613956 2295.857424 2759.255211 2973.654412 2234.293516 3602.752504 4279.314234 0.651852937 0.710419255 0.666226082 0.514711899 0.536501247 0.644789109 0.694890407 0.522114851 0.841899498 1 12.06316391 -8.482272577 4.159778633 0.998767583 0.620646294 0.775526978 0.067801471 0.087471489 3.478595715 0.069717368 0.018255349 3.29E-09 8.482272577 -0.378121289 IPMTPTSSFVSPPPPTASPHS(ph)NR ddPTM_A459_MK2206_30min_R2 1 IPMTPTSSFVSPPPPTASPHSNR 23 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 IPMTPTSSFVSPPPPT(0.306)AS(0.306)PHS(0.388)NR 71.085 0.014414 0 4337.1 10229 8535 5133.9 3686.5 6656.7 5656.3 5450.9 4133 3395.2 TRUE FALSE 4669.151711 9721.042734 8819.55264 4714.443947 3541.749487 6910.025383 4913.621016 6163.351346 4492.480869 3284.414902 1.421608369 2.959748699 2.685273604 1.435398416 1.078350206 2.103883215 1.496041506 1.87654469 1.36781771 1 11.68142067 -5.459533002 0.154415753 0.799643981 3.343474129 0.266763299 0.535432389 25.48657965 0.886210799 2.911147653 13.85041847 3.47E-06 5.459533002 2.543830148 IPNSYEVLFPES(ph)PAR ddPTM_A459_MK2206_30min_R1 1 IPNSYEVLFPESPAR 15 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 IPNSYEVLFPES(1)PAR 109.67 0.0036899 2384800 281.34 328.14 349.42 259.44 377.15 344.52 246.96 423.43 365.35 183.66 TRUE FALSE 257.4105556 306.7780264 325.7023439 279.4221138 362.1273169 364.0264247 230.485749 419.7279962 403.3294399 206.4131874 1.247064487 1.486232688 1.577914416 1.35370282 1.754380723 1.763581239 1.116623177 2.033435952 1.953990659 1 7.689391335 -3.658220316 0.652388054 1.622881532 3.34E-14 0.07523688 0.319699314 30.66018282 3.241204383 0.135209012 51.74923395 0.000219675 3.658220316 -1.622881532 IPNYQLS(ph)PTKLPSINK ddPTM_A459_MK2206_30min_R1 2 IPNYQLSPTKLPSINK 16 1 O60934;A0A0C4DG07 O60934 NBN Nibrin 1 IPNY(0.2)QLS(0.797)PT(0.002)KLPSINK;IPNY(0.009)QLS(0.988)PT(0.003)KLPSINK 90.316 0.0068539 477990000 10945.1 11164.6 12079 10321.5 8668.6 7635.7 9844.4 9654.7 9932.1 8659.9 TRUE FALSE 10014.16177 10437.78251 11259.11113 11116.46372 8323.311306 8068.026735 9187.698038 9570.289976 10964.57734 9732.753791 1.0289135 1.072438771 1.156826873 1.142170444 0.855185643 0.828956214 0.943997787 0.983307518 1.12656475 1 13.24863234 -6.248846897 24.97518069 0.948514861 1.10216532 0.41480345 0.083322165 798.5651922 1583826.26 0.026966612 0.034577981 5.64E-07 6.248846897 0.153650459 IPNYQLS(ph)PTKLPSINK ddPTM_A459_MK2206_30min_R2 1 IPNYQLSPTKLPSINK 16 1 O60934;A0A0C4DG07 O60934 NBN Nibrin 1 IPNY(0.34)QLS(0.654)PT(0.004)KLPS(0.002)INK 70.453 0.023394 321350000 161950 163020 158510 158610 156130 108640 183200 123270 121670 160170 TRUE FALSE 174349.0165 154924.6639 163794.6443 145651.0556 149999.5517 112774.3713 159145.6199 139381.8122 132252.6367 154943.666 1.125241328 0.999877361 1.057123847 0.940025878 0.968090891 0.727841119 1.027119236 0.899564441 0.853553037 1 17.24138425 -5.831806174 1.60526061 0.903070479 1.067602325 0.385874821 0.083590732 0.396749276 2.081863043 0.026593445 0.053868186 1.47E-06 5.831806174 0.164531846 IPNYQLSPT(ph)K ddPTM_A459_MK2206_30min_R2 1 IPNYQLSPTK 10 0 O60934;A0A0C4DG07 O60934 NBN Nibrin 1 IPNYQLS(0.106)PT(0.894)K 117.95 0.013715 28804000 149710 97040 109010 115340 86619 60760 118650 96929 64397 127850 TRUE FALSE 161171.9127 92221.13471 112644.339 105916.353 83217.90283 63072.26438 103071.1125 109597.9531 69998.13466 123678.265 1.303154703 0.745653529 0.910785246 0.856386149 0.672857942 0.509970482 0.83338097 0.886153708 0.565969572 1 16.91623246 -2.808358049 1.49639301 0.759906072 199.9999998 0.513036295 0.150814278 421.0255934 3.360517443 0.042370305 285719.6935 0.001554683 2.808358049 199.2400937 IPPIIEES(ph)SSPPYR ddPTM_A459_MK2206_30min_R1 1 IPPIIEESSSPPYR 14 0 A0A5H1ZRR2;Q6P9H4 A0A5H1ZRR2 CNKSR3 Connector enhancer of kinase suppressor of ras 3 1 IPPIIEES(0.478)S(0.478)S(0.044)PPYR 97.86 0.010799 2253800 347.5 428.7 463.41 416.97 321.79 267.88 449.96 336.68 365.01 309.04 TRUE FALSE 317.9433002 400.7915521 431.9550203 449.0851016 308.9724229 283.0471341 419.9439894 333.7364423 402.9540957 347.3262083 0.91540256 1.15393409 1.243658008 1.292977872 0.889574168 0.81493169 1.209076595 0.960873191 1.160160351 1 8.440147467 -6.265951946 24.99813052 1.004436477 1.15825069 0.201186134 0.141982412 640.4088673 3547648.394 0.045140518 0.052941688 5.42E-07 6.265951946 0.153814213 IPPIIEESSS(ph)PPYR ddPTM_A459_MK2206_30min_R1 1 IPPIIEESSSPPYR 14 0 A0A5H1ZRR2;Q6P9H4 A0A5H1ZRR2 CNKSR3 Connector enhancer of kinase suppressor of ras 3 1 IPPIIEES(0.07)S(0.222)S(0.707)PPYR 98.253 0.010524 2547800 707.91 858.72 1066.6 604.44 623.25 609.91 603.41 782.15 988.65 881.78 TRUE FALSE 647.6985371 802.8171719 994.2021637 650.9940735 598.4246327 644.4425771 563.1576199 775.311745 1091.423705 991.0215635 0.653566543 0.810090518 1.003209416 0.656891936 0.603846228 0.650281085 0.568259704 0.782335898 1.101311763 1 9.952772639 -8.167163722 4.646648312 1.048711159 0.712026013 0.559682518 0.119831311 0.176235656 6.193212993 0.097684976 0.034130007 6.81E-09 8.167163722 -0.336685146 IPS(ph)PLQPEMQGTPDDEPSEPEPSPSTLIYR ddPTM_A459_MK2206_30min_R1 2 IPSPLQPEMQGTPDDEPSEPEPSPSTLIYR 30 0 Q96GY3;K7EMY4 Q96GY3 LIN37 Protein lin-37 homolog 1 IPS(1)PLQPEMQGTPDDEPSEPEPSPSTLIYR;IPS(1)PLQPEMQGTPDDEPSEPEPSPSTLIYR 134.94 4.38E-18 6863000 856.96 513.92 617.21 634.53 574.39 549.27 673.61 713.25 416.9 560.29 TRUE FALSE 784.0710519 480.4637146 575.3155048 683.4016105 551.51083 580.3691927 628.674706 707.0141304 460.2382469 629.7029552 1.24514431 0.763000571 0.91362999 1.085276169 0.875826968 0.921655501 0.998367088 1.122774039 0.73088151 1 9.298527628 -4.737719488 24.91386996 0.942242679 1.245145668 0.377938504 0.119159927 2237.32673 2349819.768 0.028783229 1.740490276 1.83E-05 4.737719488 0.30290299 IPS(ph)PNILK ddPTM_A459_MK2206_30min_R1 1 IPSPNILK 8 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 IPS(1)PNILK 95.483 0.021851 56913000 8400.2 8172 8866.3 7469.8 8896.7 7575.3 8903.5 8397.1 7654.3 6403.8 TRUE FALSE 7685.718879 7640.001315 8264.480259 8045.12529 8542.3256 8004.20694 8309.56376 8323.68504 8449.991876 7197.15109 1.067883498 1.061531322 1.148298841 1.117820814 1.186903747 1.11213546 1.154562917 1.156524983 1.174074543 1 12.81321023 -5.258278778 24.58848739 1.138532567 1.0647074 0.213282807 0.049614831 261.3336941 2033054.163 0.011687866 0.028406717 5.52E-06 5.258278778 -0.073825166 IPS(ph)PNILK ddPTM_A459_MK2206_30min_R2 1 IPSPNILK 8 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 IPS(1)PNILK 92.239 0.025743 54210000 84899 107170 89166 102490 93505 85827 111880 81101 81836 87837 TRUE FALSE 91398.93272 101848.0936 92138.74994 94116.23915 89833.52388 89093.20663 97190.02161 91701.17916 88953.94735 84970.88588 1.075649992 1.198623418 1.084356706 1.107629256 1.057227107 1.048514508 1.143803793 1.079207051 1.046875603 1 16.37468099 -7.762091069 0.013722248 8.53E-06 2.14732317 0.378294547 0.041555417 568.7510869 7.51312288 583.6273582 590.2874166 1.73E-08 7.762091069 2.147314644 IPSFFPSPEEPPS(ph)PSAPSIAK ddPTM_A459_MK2206_30min_R1 1 IPSFFPSPEEPPSPSAPSIAK 21 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 IPSFFPSPEEPPS(0.776)PS(0.22)APS(0.004)IAK 108.44 8.22E-05 4700000 2803.6 3006.3 2417.8 2036.4 2355.8 1946.3 1909.3 1984.1 1787.4 1668.2 TRUE FALSE 2565.139098 2810.589324 2253.686472 2193.243881 2261.963498 2056.497824 1781.934081 1966.753223 1973.206626 1874.86921 1.368169621 1.499085541 1.202049967 1.169811669 1.206464688 1.096875352 0.95043114 1.049008225 1.052450281 1 10.87257424 -5.605255625 0.590750146 1.008773684 1.537093582 0.823078905 0.067786883 0.663095589 0.33510451 0.042261756 0.213122891 2.48E-06 5.605255625 0.528319898 IPSFFPSPEEPPS(ph)PSAPSIAK ddPTM_A459_MK2206_30min_R2 1 IPSFFPSPEEPPSPSAPSIAK 21 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 IPSFFPSPEEPPS(0.529)PS(0.446)APS(0.024)IAK 84.947 0.00075306 1385000 17162 16665 15750 16018 13985 13600 13662 9693.9 13165 13358 TRUE FALSE 18475.93592 15837.44033 16275.09714 14709.27816 13435.87863 14117.55753 11868.16299 10960.92601 14310.0679 12922.12955 1.429790333 1.225606063 1.259474847 1.1383014 1.039757307 1.092510137 0.918437084 0.848229076 1.107407865 1 13.65755622 -5.525052554 0.609385846 0.958405137 1.473989034 0.768826064 0.077702904 0.793951159 0.406742348 0.045026898 0.25663333 2.99E-06 5.525052554 0.515583898 IPSFFPSPEEPPSPS(ph)APSIAK ddPTM_A459_MK2206_30min_R1 1 IPSFFPSPEEPPSPSAPSIAK 21 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 IPSFFPSPEEPPS(0.402)PS(0.579)APS(0.019)IAK 93.21 0.00035258 4070200 2178.3 1878.9 1756.3 1671.7 1471.1 1639.1 1456.1 1649.6 1362.4 1422.5 TRUE FALSE 1993.024146 1756.583268 1637.087249 1800.454624 1412.502972 1731.904426 1358.966226 1635.177721 1504.026355 1598.730039 1.246629573 1.098736638 1.0239923 1.126178016 0.883515626 1.083300109 0.85002858 1.022797896 0.94076318 1 10.64271063 -1.522878745 0.483244393 0.962170627 8.896564826 0.555148192 0.075011353 70.91435942 0.788123063 0.040134525 566.1955225 0.03 1.522878745 7.934394198 IPSIVS(ph)SPLNSPLDR ddPTM_A459_MK2206_30min_R2 1 IPSIVSSPLNSPLDR 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IPSIVS(0.851)S(0.147)PLNS(0.002)PLDR 139.34 0.00039394 1581300 3431.2 2976.3 2604.7 4860 3955.8 3933.7 4851.4 3092.8 2588.1 3650.4 TRUE FALSE 3693.89531 2828.50127 2691.539398 4462.922454 3800.475416 4083.39971 4214.405352 3497.039579 2813.20826 3531.287747 1.046047667 0.800982948 0.7621977 1.263822938 1.076229321 1.156348619 1.193447166 0.990301507 0.79665223 1 11.78597867 -4.44354311 22.16926042 1.012038995 2.997925156 0.003759214 0.16589876 6186.16438 1821442.048 0.043247093 33088.38123 3.60E-05 4.44354311 1.985886161 IPSIVSS(ph)PLNSPLDR ddPTM_A459_MK2206_30min_R2 2 IPSIVSSPLNSPLDR 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IPSIVS(0.053)S(0.945)PLNS(0.001)PLDR;IPSIVS(0.327)S(0.673)PLNSPLDR 188 2.44E-05 35355000 44323 37049 41550 37949 36924 34852 44065 26690.1 30232.1 42043 TRUE FALSE 47716.40296 35209.20053 42935.25626 34848.44531 35474.17823 36178.31728 38279.21257 30178.58771 32861.63341 40671.14035 1.173225106 0.865704778 1.055668857 0.856834724 0.872219906 0.889532896 0.941188573 0.742014791 0.807984067 1 15.31171782 -1.522878745 0.679569398 0.866314521 29.836638 0.445811858 0.089255415 238.0438147 1.370672115 0.035276107 10439.3162 0.03 1.522878745 28.97032348 IPSLGWS(ph)PSK ddPTM_A459_MK2206_30min_R1 2 IPSLGWSPSK 10 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 IPSLGWS(0.996)PS(0.004)K;IPSLGWS(0.997)PS(0.003)K 148.78 0.00077327 150340000 11418.8 10948.7 10852.2 9090.5 9318.2 6475.7 9290.2 9973.9 9950 9530.6 TRUE FALSE 10447.5711 10235.93764 10115.5829 9790.651885 8947.036362 6842.348538 8670.467709 9886.699244 10984.33811 10711.32268 0.975376376 0.955618456 0.944382239 0.914046955 0.835287726 0.638795856 0.809467511 0.923013855 1.025488489 1 13.38684902 -5.99432366 3.112142448 0.854070702 0.957867208 0.110756413 0.102342083 0.509527144 10.18369937 0.033617913 0.049765321 1.01E-06 5.99432366 0.103796506 IPSLGWS(ph)PSK ddPTM_A459_MK2206_30min_R2 2 IPSLGWSPSK 10 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 IPSLGWS(0.99)PS(0.01)K;IPSLGWS(0.996)PS(0.004)K 148.78 0.00077327 74788000 192027 187867 182037 177927 200660 131469 237600 165707 193506 197760 TRUE FALSE 206728.7348 178537.798 188106.0227 163389.7949 192781.0802 136472.1449 206402.8346 187365.4739 210336.8021 191307.1074 1.080611889 0.9332523 0.983267299 0.854070699 1.007704747 0.713366831 1.078908345 0.979396304 1.099471969 1 17.54553095 IPSNFVS(ph)PEDLDIPGHASK ddPTM_A459_MK2206_30min_R2 1 IPSNFVSPEDLDIPGHASK 19 0 E9PE54;E7EUM0;H7C5I3;J3KR55;P35236;P35236-2;P35236-3 E9PE54 PTPN7 Tyrosine-protein phosphatase non-receptor type 7 1 IPSNFVS(0.999)PEDLDIPGHASK 61.11 0.036757 4703700 7464.7 45223 7934.7 14042 8343.9 8520.1 11902 9291.1 8689.8 9870.1 TRUE FALSE 8036.203171 42977.29158 8199.238938 12894.72368 8016.276561 8844.338376 10339.2531 10505.47867 9445.623096 9548.039445 0.841660031 4.501164017 0.858735344 1.350510097 0.839573046 0.926298894 1.08286661 1.100276002 0.989273573 1 13.22098881 IPSTENSSQEISVEERT(ph)PTK ddPTM_A459_MK2206_30min_R1 4 IPSTENSSQEISVEERTPTK 20 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 IPSTENSS(0.001)QEISVEERT(0.928)PT(0.072)K;IPSTENSSQEIS(0.001)VEERT(0.779)PT(0.22)K;IPSTENSSQEIS(0.01)VEERT(0.871)PT(0.119)K;IPSTENSSQEISVEERT(0.747)PT(0.252)K 120.31 0.00034742 101935000 9408.8 9332.5 10378.3 9543.2 8426.6 8640.1 8617.4 9110.9 7320.16 6873.61 TRUE FALSE 8608.532152 8724.952554 9673.849912 10278.21892 8090.950678 9129.294995 8042.548969 9031.244362 8081.116827 7725.1647 1.114349336 1.129419617 1.252251607 1.330485409 1.047349926 1.181760564 1.041084466 1.169068196 1.046076963 1 12.91534998 -6.293280369 24.98605593 1.092396677 1.204370722 0.377871493 0.078184572 805.4156705 632018.3128 0.024708338 0.028018997 5.09E-07 6.293280369 0.111974046 IPSTENSSQEISVEERT(ph)PTK ddPTM_A459_MK2206_30min_R2 2 IPSTENSSQEISVEERTPTK 20 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 IPSTENSSQEISVEERT(0.967)PT(0.033)K;IPSTENSSQEISVEERT(0.928)PT(0.072)K 99.378 0.0011379 46356200 61174 70611 56242 71128 70176 57801 75848 51981 65440 67279 TRUE FALSE 65857.52847 67104.56042 58117.08021 65316.61487 67420.53763 60000.65756 65889.06649 58775.09518 71131.85291 65083.69174 1.011889872 1.031050308 0.892959183 1.003578825 1.035905245 0.921900033 1.012374448 0.903069473 1.092928981 1 15.99000847 -8.276743937 24.92659026 1.046464475 0.977865003 0.209309689 0.05427752 1384.882706 2255541.17 0.049214569 0.012889131 5.29E-09 8.276743937 -0.068599472 IPT(ph)TT(ph)PAT(ph)T(ph)K ddPTM_A459_MK2206_30min_R1 1 IPTTTPATTK 10 0 C9JDI8;C9JYP5;E7ETP9;Q9UQV4 C9JDI8 LAMP3 Lysosome-associated membrane glycoprotein 3 4 IPT(0.537)T(0.537)T(0.926)PAT(1)T(1)K 57.047 0.043463 0 1286.6 585.03 970.79 1283.2 1605.2 2908.4 1345.5 1118.8 1293.9 533.87 TRUE FALSE 1177.167914 546.9444407 904.8954796 1382.032286 1541.261485 3073.071095 1255.74415 1109.01845 1428.405535 600.0098461 1.961914328 0.911559109 1.508134384 2.303349346 2.568726988 5.12170111 2.092872572 1.848333751 2.380636825 1 9.228842365 -5.839404672 3.061310467 2.64177348 1.382380576 0.165523703 1.020381537 0.403759639 7.609611564 0.310180703 0.510472842 1.45E-06 5.839404672 -1.259392904 IPVEGPLS(ph)PSR ddPTM_A459_MK2206_30min_R1 3 IPVEGPLSPSR 11 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 IPVEGPLS(0.948)PS(0.052)R;IPVEGPLS(0.851)PS(0.149)R;IPVEGPLS(0.903)PS(0.097)R 143.55 0.00083027 18715500 4164.79 4176.92 4076.44 3610.79 4202 3997.2 4376.8 3643.67 4238.9 4405.11 TRUE FALSE 3810.55274 3905.001749 3799.74261 3888.893671 4034.625442 4223.51801 4084.831658 3611.813777 4679.548824 4950.848284 0.769676735 0.788754073 0.767493244 0.785500474 0.814936191 0.853089767 0.825077123 0.729534328 0.945201419 1 12.27346002 -8.417382227 4.733183742 0.997974119 0.795018679 0.831985005 0.032851453 0.082353123 2.703587249 0.033367708 0.00870712 3.82E-09 8.417382227 -0.20295544 IPVEGPLS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 IPVEGPLSPSR 11 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 IPVEGPLS(0.709)PS(0.291)R;IPVEGPLS(0.527)PS(0.473)R 112.5 0.0076375 18328300 18219.1 21437.5 16999.4 22341 19405.3 21360.4 19967.2 16264.1 17541.8 15645 TRUE FALSE 19613.9683 20372.94492 17566.15151 20515.66883 18643.35042 22173.28499 17345.48266 18389.87371 19067.55406 15134.50493 1.295976868 1.346125626 1.160669053 1.355555991 1.231844088 1.465081619 1.14608854 1.215095822 1.259872995 1 13.88555386 -9.553084114 0.462911593 0.964688278 1.2981203 0.477345284 0.089020514 3.850069435 1.0275025 0.339638165 0.048383435 2.80E-10 9.553084114 0.333432023 IPVEGPLSPS(ph)R ddPTM_A459_MK2206_30min_R1 1 IPVEGPLSPSR 11 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 IPVEGPLS(0.233)PS(0.767)R 103.14 0.01359 13271000 2007.4 1904.7 1865.1 1462.5 1617.5 1846.7 2803.2 2862.2 2158.5 2284.4 TRUE FALSE 1836.660089 1780.703684 1738.502208 1575.142003 1553.07155 1951.258558 2616.203643 2837.176087 2382.883799 2567.408718 0.71537503 0.693580134 0.677142753 0.613514316 0.604917923 0.76001088 1.019005515 1.105073792 0.928127953 1 11.32609727 -7.16318112 3.350212834 1.02423127 0.662221132 0.911171028 0.051973988 0.068982431 1.464885322 0.022139875 0.016447384 6.87E-08 7.16318112 -0.362010137 IPVEGPLSPS(ph)R ddPTM_A459_MK2206_30min_R2 1 IPVEGPLSPSR 11 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 IPVEGPLS(0.126)PS(0.874)R 81.676 0.041434 5505300 10037 9474 9796.1 9496.8 7943.8 11234 11497 9436.3 7265 12001 TRUE FALSE 10805.44044 9003.534936 10122.69708 8720.881061 7631.886498 11661.51774 9987.43009 10669.65681 7896.896568 11609.40835 0.930748588 0.775537793 0.871939101 0.751190827 0.657388065 1.004488548 0.860287603 0.91905259 0.680215247 1 13.50300683 -6.770131807 24.99999534 0.885716967 0.797726706 0.161766629 0.10803305 400.8827769 1152958.208 0.037372671 0.033463098 1.70E-07 6.770131807 -0.087990261 IPVLS(ph)PKPAVAPPAPPSSSQLCR ddPTM_A459_MK2206_30min_R2 2 IPVLSPKPAVAPPAPPSSSQLCR 23 1 Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4;G3V411;Q6PJT7-8 Q6PJT7-5 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 IPVLS(0.998)PKPAVAPPAPPS(0.001)S(0.001)S(0.001)QLCR;IPVLS(1)PKPAVAPPAPPSSSQLCR 50.858 0.022903 18330400 87779 66979 63254 54433 62096 44106 79210 55711 40838 94846 TRUE FALSE 94499.42773 63652.92026 65362.85679 49985.64978 59657.79903 45784.48474 68809.63185 62992.61898 44390.01542 91751.18279 1.029953237 0.693755855 0.712392525 0.544795699 0.650212861 0.499007025 0.749959071 0.686559204 0.483808645 1 16.48543914 -4.550935056 1.967814859 0.646166979 1.372124393 0.363086563 0.14168534 1.712813519 4.094134205 0.035124452 2.798836439 2.81E-05 4.550935056 0.725957414 IPYPGRS(ph)PQDLASTSR ddPTM_A459_MK2206_30min_R2 2 IPYPGRSPQDLASTSR 16 1 Q9HC52;C9JM54;C9J6K3 Q9HC52 CBX8 Chromobox protein homolog 8 1 IPYPGRS(0.995)PQDLAS(0.003)T(0.001)S(0.001)R;IPY(0.001)PGRS(0.999)PQDLASTSR 90.476 0.0067847 19947900 13168.2 23171.7 16768.8 23075.3 19906.3 25053 25420 13336.8 18380.3 18266.7 TRUE FALSE 14176.36752 22021.02707 17327.86342 21189.97418 19124.67864 26006.40947 22082.32347 15079.96555 19978.98527 17670.65907 0.802254599 1.246191609 0.980600856 1.199161508 1.082284399 1.471728324 1.249660433 0.853390102 1.130630453 1 14.10906823 -4.750111292 24.97613123 1.139930268 0.802253854 0.270835125 0.163527262 712.9243545 1571752.108 0.041852557 0.636763937 1.78E-05 4.750111292 -0.337676414 IPYQS(ph)PVSSSESAPGTIMNGHGGGR ddPTM_A459_MK2206_30min_R1 2 IPYQSPVSSSESAPGTIMNGHGGGR 25 0 Q5T6F2;H0YDN2 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 1 IPYQS(0.924)PVS(0.061)S(0.006)S(0.009)ESAPGTIMNGHGGGR;IPYQS(0.729)PVS(0.268)S(0.001)S(0.002)ESAPGTIMNGHGGGR 164.99 1.76E-14 18339600 3612.2 2668.3 3411.7 2667.1 4244.6 3459.9 3778.4 3663.5 2855.5 2706.1 TRUE FALSE 3304.963422 2494.593185 3180.12331 2872.520504 4075.528594 3655.796548 3526.34983 3631.470406 3152.339444 3041.352098 1.086675701 0.820225053 1.045628131 0.944487982 1.340038398 1.202030028 1.159467801 1.194031565 1.036492764 1 11.57049713 -6.227867481 24.92605337 1.167585583 0.968350226 0.394018889 0.109290999 570.4143867 423514.2408 0.03109192 0.040137106 5.92E-07 6.227867481 -0.199235357 IPYQS(ph)PVSSSESAPGTIMNGHGGGR ddPTM_A459_MK2206_30min_R2 4 IPYQSPVSSSESAPGTIMNGHGGGR 25 0 Q5T6F2;H0YDN2 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 1 IPY(0.027)QS(0.654)PVS(0.208)S(0.063)S(0.043)ES(0.005)APGTIMNGHGGGR;IPY(0.001)QS(0.976)PVS(0.006)S(0.007)S(0.009)ESAPGTIMNGHGGGR;IPY(0.001)QS(0.976)PVS(0.013)S(0.005)S(0.005)ESAPGTIMNGHGGGR;IPY(0.012)QS(0.939)PVS(0.019)S(0.019)S(0.009)ES(0.003)APGTIMNGHGGGR 112.35 9.22E-08 31465400 39132.3 55954 47628.4 56142.3 58303.6 58197.7 54501.5 41481.4 44958.7 55593.8 TRUE FALSE 42128.29898 53175.40572 49216.30708 51555.2945 56014.30771 60412.45425 47345.38758 46903.16141 48869.12646 53779.77886 0.783348312 0.988762075 0.915145211 0.958637161 1.04154961 1.123330284 0.88035668 0.872133772 0.908689613 1 15.7147762 -4.756701656 24.96040575 0.964280191 0.783348032 0.354839346 0.073629675 181.8434558 957914.9859 0.020116022 0.158974572 1.75E-05 4.756701656 -0.180932159 IPYQSPVS(ph)SSESAPGTIMNGHGGGR ddPTM_A459_MK2206_30min_R2 1 IPYQSPVSSSESAPGTIMNGHGGGR 25 0 Q5T6F2;H0YDN2 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 1 IPY(0.001)QS(0.413)PVS(0.531)S(0.022)S(0.033)ESAPGTIMNGHGGGR 92.798 1.61E-05 10078000 15824 17735 16208 19145 19423 21812 17139 14232 17173 18020 TRUE FALSE 17035.49761 16854.30569 16748.36663 17580.79226 18660.35543 22642.07094 14888.62871 16092.17127 18666.6765 17432.00888 0.97725384 0.966859632 0.96078236 1.008535068 1.070465003 1.298879039 0.854097128 0.923139231 1.070827616 1 14.08945122 -5.941514211 4.457251352 1.036734279 0.968882292 0.071908501 0.109002145 0.663003486 27.08459766 0.033687738 0.050554525 1.14E-06 5.941514211 -0.067851987 IQAAAST(ph)PTNATAASDANTGDR ddPTM_A459_MK2206_30min_R2 1 IQAAASTPTNATAASDANTGDR 22 0 P49841;P49841-2 P49841 GSK3B Glycogen synthase kinase-3 beta 1 IQAAAS(0.056)T(0.899)PT(0.045)NATAASDANTGDR 127.07 6.77E-05 3851500 22348 19780 20581 22687 19957 19722 20696 11538 15863 15471 TRUE FALSE 24058.98006 18797.75396 21267.16027 20833.39953 19173.3879 20472.53453 17978.59034 13046.05622 17242.73507 14966.18254 1.607556236 1.256015281 1.421014358 1.392031634 1.281114129 1.367919607 1.201280974 0.871702332 1.152113107 1 13.86941866 -7.483742658 3.330075173 1.008681059 1.377720664 0.703074309 0.11026587 0.13157319 2.965204834 0.050712102 0.030154119 3.28E-08 7.483742658 0.369039605 IQALQQQADEAEDR ddPTM_A459_MK2206_30min_R2 1 IQALQQQADEAEDR 14 0 P67936;A0A2R8Y5V9;A0A2R8YGX3;A0A590UJB9;A0A590UK79 P67936 TPM4 Tropomyosin alpha-4 chain 0 126.34 0.018081 3022900 13927 16752 17826 14898 15665 14751 17665 12154 13388 14322 FALSE TRUE 14993.26183 15920.12004 18420.30994 13680.78574 15049.91339 15312.35964 15345.56428 13742.56953 14552.46404 13854.67431 1.082180749 1.149079342 1.329537565 0.987449105 1.086269735 1.105212529 1.107609167 0.991908523 1.050364932 1 13.75808518 -6.95849856 0.507954619 1.004308689 1.167715447 0.267831117 0.081752837 1.381273353 0.764060812 0.078250442 0.086843876 1.10E-07 6.95849856 0.163406759 IQDPTEDAEAEDT(ph)PR ddPTM_A459_MK2206_30min_R2 4 IQDPTEDAEAEDTPR 15 0 O96028-3;O96028;H0Y9L4;O96028-5 O96028-3;O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 IQDPTEDAEAEDT(1)PR;IQDPTEDAEAEDT(1)PR;IQDPTEDAEAEDT(1)PR;IQDPTEDAEAEDT(1)PR 179.74 4.69E-05 86676700 227189 244699 218340 256631 252180 279389 279590 235696 237448 236204 TRUE FALSE 244582.7645 232547.6035 225619.3466 235663.4264 242278.1461 290021.3442 242879.4972 266502.2765 258100.7978 228496.6828 1.070399629 1.017728575 0.987407536 1.03136476 1.060313625 1.269258444 1.062945397 1.166328864 1.129560371 1 17.8018137 -6.536606396 24.99982609 1.135729208 1.026094727 0.319450232 0.067883533 240.8815997 438673.6605 0.021121773 0.021132203 2.91E-07 6.536606396 -0.10963448 IQEQES(ph)SGEEDSDLSPEER ddPTM_A459_MK2206_30min_R2 1 IQEQESSGEEDSDLSPEER 19 0 E7EMN6;Q6NXS1;P41236 E7EMN6 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 1 IQEQES(0.867)S(0.133)GEEDSDLSPEER 161.31 1.44E-06 21963000 24828 33584 25416 33779 32260 26119 31284 30130 26407 30461 TRUE FALSE 26728.85077 31916.2674 26263.35675 31019.14765 30993.31031 27112.97685 27176.37322 34068.09445 28703.83313 29467.06006 0.907075586 1.083116786 0.891278488 1.052671952 1.051795131 0.920111365 0.922262797 1.156141616 0.974098979 1 14.84681551 -7.729956862 24.99993411 1.04884078 0.980150415 0.134784684 0.077893202 369.1199807 293114.3556 0.035355084 0.020409711 1.86E-08 7.729956862 -0.068690365 IQEQESS(ph)GEEDSDLSPEER ddPTM_A459_MK2206_30min_R2 1 IQEQESSGEEDSDLSPEER 19 0 E7EMN6;Q6NXS1;P41236 E7EMN6 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 1 IQEQES(0.021)S(0.979)GEEDSDLSPEER 172.99 1.76E-09 21726000 12367 15081 15503 16165 17077 15219 16146 13734 14746 19051 TRUE FALSE 13313.82703 14332.09947 16019.86228 14844.26779 16406.47117 15798.16971 14026.01081 15529.08096 16028.58043 18429.36743 0.722424526 0.777677233 0.869257306 0.805468112 0.890235177 0.857227996 0.761068488 0.842626911 0.869730363 1 14.16971893 -14.52287875 0.138816387 1.596018704 0.760119794 0.605856835 0.046684657 107.5526618 0.914676915 17.79438509 0.315729364 3.00E-15 14.52287875 -0.835898909 IQES(ph)PGK ddPTM_A459_MK2206_30min_R2 1 IQESPGK 7 0 P49736;H0Y8E6 P49736 MCM2 DNA replication licensing factor MCM2 1 IQES(1)PGK 83.783 0.038651 13042000 154710 138810 141730 111760 156300 95960 165630 163870 112550 193110 TRUE FALSE 166554.7166 131916.8972 146455.2075 102628.8505 150162.8767 99611.82504 143882.582 185288.3716 122339.3956 186808.8365 0.891578362 0.706159835 0.783984367 0.549378993 0.803831764 0.533228657 0.770212934 0.991860851 0.654890838 1 17.51120317 -8.982089642 0.60085712 1.001176539 0.718313673 0.235132679 0.135566787 2.329866759 1.5135593 0.170686621 0.057272709 1.04E-09 8.982089642 -0.282862866 IQFVEGPVEPGKPTS(ph)PEHVVYEGETVTR ddPTM_A459_MK2206_30min_R1 1 IQFVEGPVEPGKPTSPEHVVYEGETVTR 28 1 Q9H7C4-2;Q9H7C4;C9JTN4;C9JSS1 Q9H7C4-2 SYNC Syncoilin 1 IQFVEGPVEPGKPT(0.132)S(0.86)PEHVVY(0.007)EGETVT(0.001)R 70.71 0.0093495 0 230.8 184.21 194.2 120.86 144.21 201.71 227.16 0 197.61 264.05 TRUE FALSE 211.169248 172.2178955 181.0182451 130.1686581 138.4658103 213.1306459 212.0065709 0 218.1522667 296.7625075 0.711576573 0.580322282 0.609976801 0.438629055 0.466587951 0.718185891 0.714398098 0 0.735107236 1 8.213165025 -8.52745632 24.59011783 1.000000038 0.530694916 0.349556461 0.201144056 457.1623689 2455819.907 0.193304678 0.049911053 2.97E-09 8.52745632 -0.469305122 IQFVEGPVEPGKPTS(ph)PEHVVYEGETVTR ddPTM_A459_MK2206_30min_R2 2 IQFVEGPVEPGKPTSPEHVVYEGETVTR 28 1 Q9H7C4-2;Q9H7C4;C9JTN4;C9JSS1 Q9H7C4-2 SYNC Syncoilin 1 IQFVEGPVEPGKPT(0.429)S(0.558)PEHVVY(0.012)EGET(0.001)VT(0.001)R;IQFVEGPVEPGKPT(0.431)S(0.558)PEHVVY(0.008)EGET(0.001)VT(0.001)R 55.417 0.0035298 8474900 10959.7 11787.2 11064.4 14049.2 11712.1 10160.2 16534.2 9324.3 9856 13563.4 TRUE FALSE 11798.78306 11201.86479 11433.28157 12901.33542 11252.22411 10546.85353 14363.23968 10543.01803 10713.25706 13120.82737 0.899240782 0.853746831 0.871384193 0.983271486 0.857584952 0.803825341 1.094690089 0.803533019 0.816507737 1 13.67957108 IQIISTDSAVAS(ph)PQR ddPTM_A459_MK2206_30min_R1 1 IQIISTDSAVASPQR 15 0 P49116;P49116-2;C9JKS0;C9JMI6;C9J2Y1 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 IQIIS(0.001)T(0.001)DS(0.001)AVAS(0.997)PQR 139.49 0.00039334 15662000 2355 1632.3 1729.8 1731.3 1983.2 1646.9 2053.4 1742.5 1725.7 1612.1 TRUE FALSE 2154.694883 1526.036973 1612.385995 1864.645026 1904.204945 1740.146055 1916.421433 1727.265506 1905.09269 1811.819119 1.189243927 0.842267839 0.889926582 1.029156281 1.050990645 0.96044138 1.057733309 0.9533322 1.05148062 1 10.82322322 IQIISTDSAVAS(ph)PQR ddPTM_A459_MK2206_30min_R2 3 IQIISTDSAVASPQR 15 0 P49116;P49116-2;C9JKS0;C9JMI6;C9J2Y1 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 IQIISTDSAVAS(1)PQR;IQIISTDSAVAS(1)PQR;IQIISTDSAVAS(1)PQR 193.41 2.31E-05 34555000 99441 104413 86642 123773 105725 103356 116108 87877 83639 107783 TRUE FALSE 107054.2794 99228.00225 89530.60104 113660.35 101573.7053 107289.285 100862.8801 99362.82563 90913.76904 104266.0495 1.026741493 0.951680846 0.85867453 1.090099323 0.974178131 1.028995397 0.967360714 0.952973917 0.871940286 1 16.66990995 -7.790128759 3.216558798 0.930844962 0.98524327 0.093007931 0.063624288 0.569415051 11.99941289 0.038407819 0.017568965 1.62E-08 7.790128759 0.054398308 IQIVTAVDAS(ph)GSPK ddPTM_A459_MK2206_30min_R1 1 IQIVTAVDASGSPK 14 0 P49116;P49116-2;C9JKS0;C9JMI6 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 IQIVT(0.001)AVDAS(0.576)GS(0.423)PK 75.463 0.044237 10274000 3371.6 4727.4 3628.4 3325.2 2925.2 2758.1 2879.9 2338.8 3312.8 2683.4 TRUE FALSE 3084.827715 4419.645401 3382.114317 3581.30748 2808.68309 2914.261238 2687.787126 2318.352118 3657.177415 3015.839851 1.022875175 1.465477485 1.121450238 1.187499223 0.931310424 0.9663183 0.891223427 0.768725209 1.212656373 1 11.5583441 -6.186390254 3.003868148 0.944892785 1.223707919 0.374207674 0.148267102 0.252259721 4.459774145 0.044783039 0.058922783 6.51E-07 6.186390254 0.278815134 IQIVTAVDASGS(ph)PK ddPTM_A459_MK2206_30min_R2 2 IQIVTAVDASGSPK 14 0 P49116;P49116-2;C9JKS0;C9JMI6 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 IQIVTAVDAS(0.225)GS(0.775)PK;IQIVTAVDAS(0.388)GS(0.612)PK 128.94 0.0010932 13000400 111198 100927 92365 87169 89192 62215 115523 88172 69146 108669 TRUE FALSE 119711.4044 95915.11194 95444.403 80047.01386 85689.87393 64582.63542 100354.6913 99696.38314 75160.19409 105123.1394 1.13877311 0.912407225 0.907929534 0.761459506 0.815138079 0.614352233 0.954639406 0.948377148 0.714972883 1 16.68172074 -4.473889004 1.32266339 0.826788694 1.497426032 0.389199294 0.113093566 2.766497817 2.526543582 0.032979147 3.040109205 3.36E-05 4.473889004 0.670637339 IQNS(ph)DDEER ddPTM_A459_MK2206_30min_R2 1 IQNSDDEER 9 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 IQNS(1)DDEER 136.01 0.0026767 7485300 43067 35056 33068 33525 28886 30392 33042 31842 29815 44038 TRUE FALSE 46364.24263 33315.17002 34170.47062 30785.90026 27751.7905 31548.58886 28703.54571 36003.85873 32408.25481 42601.04367 1.08833584 0.782027085 0.802104072 0.72265601 0.651434522 0.74055906 0.673775646 0.845140298 0.760738518 1 15.37860115 -4.753676635 4.298330619 0.759671904 1.122135377 0.496181633 0.093660979 0.182423589 6.838850801 0.022391049 0.210172409 1.76E-05 4.753676635 0.362463472 IQNTGDY(ph)YDLYGGEK ddPTM_A459_MK2206_30min_R1 2 IQNTGDYYDLYGGEK 15 0 Q06124;Q06124-1;A0A1W2PPU4;Q06124-3 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 1 IQNT(0.011)GDY(0.898)Y(0.089)DLY(0.002)GGEK;IQNT(0.001)GDY(0.759)Y(0.221)DLY(0.019)GGEK 180.3 0.00028197 7613900 2623.4 2322.4 2520.8 2338.3 2330.1 2224.8 1984.02 2376.7 2154.6 1591.28 TRUE FALSE 2400.266054 2171.211338 2349.695119 2518.396271 2237.287183 2350.766253 1851.669646 2355.920762 2378.57838 1788.41978 1.342115582 1.214038987 1.3138387 1.408168429 1.250985483 1.314437628 1.035366342 1.317319786 1.329988858 1 10.80446969 IQNWHEEHR ddPTM_A459_MK2206_30min_R1 3 IQNWHEEHR 9 0 A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3;P35241-4 A0A2R8Y5S7 RDX Radixin 0 ;; 102.62 0.0090061 21863700 3292.55 3264.99 3348.07 2925.28 3116.51 3246.55 2905 2887.36 2493.96 2720.28 FALSE TRUE 3012.501333 3052.438558 3120.812337 3150.585572 2992.372807 3430.366855 2711.21275 2862.116116 2753.216067 3057.288823 0.985350586 0.99841354 1.020777727 1.030516171 0.978766803 1.122029044 0.886802951 0.936161508 0.900541697 1 11.57803714 -7.289807952 24.99988804 0.925556662 1.019819835 0.480510892 0.046557111 610.3253448 537848.8031 0.018517819 0.012487368 5.13E-08 7.289807952 0.094263173 IQNWHEEHR ddPTM_A459_MK2206_30min_R2 4 IQNWHEEHR 9 0 A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3;P35241-4 A0A2R8Y5S7 RDX Radixin 0 ;;; 94.309 0.013205 27303600 16870.4 28901.3 21851.7 29543.5 26893.8 28425.5 28587.7 21241.7 22994.7 21642.3 FALSE TRUE 18162.0108 27466.10347 22580.22477 27129.70155 25837.81428 29507.25232 24834.10065 24018.06312 24994.73744 20936.11352 0.867496767 1.311900771 1.078529917 1.295832749 1.234126585 1.409394933 1.186184849 1.147207341 1.193857562 1 14.35370603 -4.751669147 24.99726143 1.21632439 0.867496068 0.450343024 0.111813905 351.9430279 900388.1653 0.02681498 0.345344826 1.77E-05 4.751669147 -0.348828322 IQPAGNTS(ph)PR ddPTM_A459_MK2206_30min_R1 3 IQPAGNTSPR 10 0 H0Y5S9;H0Y682;P49674 H0Y5S9 CSNK1E Casein kinase I isoform epsilon 1 IQPAGNT(0.034)S(0.966)PR;IQPAGNT(0.029)S(0.971)PR;IQPAGNT(0.107)S(0.893)PR 105.4 0.012536 109754000 20746.1 20693.4 21683.8 17815.3 21772.8 19799 20745.2 20414.9 17558.4 16071.4 TRUE FALSE 18981.53525 19346.2559 20211.96407 19187.43749 20905.54327 20920.00227 19361.32556 20236.41468 19383.65851 18062.44636 1.050883965 1.071076171 1.119004794 1.062283431 1.157403756 1.158204257 1.07191048 1.120358465 1.073146911 1 14.14070568 -8.61399794 4.345242408 1.000012143 1.102293964 0.420738678 0.035941692 0.50506611 21.78504878 0.036014927 0.009404463 2.43E-09 8.61399794 0.102281821 IQPAGNTS(ph)PR ddPTM_A459_MK2206_30min_R2 1 IQPAGNTSPR 10 0 H0Y5S9;H0Y682;P49674 H0Y5S9 CSNK1E Casein kinase I isoform epsilon 1 IQPAGNT(0.336)S(0.664)PR 80.24 0.048067 109430000 132690 136060 138180 168210 159610 155020 166940 127340 135860 151290 TRUE FALSE 142848.8484 129303.4582 142786.8522 154466.7049 153342.9094 160919.3947 145020.5775 143983.7752 147676.8572 146353.4197 0.976054053 0.883501448 0.975630447 1.055436253 1.047757611 1.099526031 0.990892989 0.983808752 1.009042751 1 17.15909693 -5.537434624 5.481170375 1.027919407 0.929138103 0.504805515 0.038785704 0.129897362 12.4202425 0.011114996 0.020642983 2.90E-06 5.537434624 -0.098781303 IQPQPPDEDGDHS(ph)DKEDEQPQVVVLK ddPTM_A459_MK2206_30min_R1 5 IQPQPPDEDGDHSDKEDEQPQVVVLK 26 1 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK 74.222 0.00011423 62330000 16702.73 21982.27 21521.16 19299.18 13539.42 11704.6 14091.41 15884.33 18257.81 18338.42 TRUE FALSE 15282.0751 20551.22023 20060.36362 20785.60619 13000.11623 12367.30434 13151.39775 15745.45498 20155.77469 20610.32192 0.741476779 0.997132423 0.973316365 1.008504684 0.630757554 0.600053914 0.638097639 0.763959682 0.977945651 1 14.33107942 -6.254160432 24.9498725 0.741727727 0.937981398 0.213356842 0.146443778 744.1514518 2550707.796 0.044610294 0.056386738 5.57E-07 6.254160432 0.196253671 IQPQPPDEDGDHS(ph)DKEDEQPQVVVLK ddPTM_A459_MK2206_30min_R2 3 IQPQPPDEDGDHSDKEDEQPQVVVLK 26 1 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK 62.735 0.0017573 52973600 228614 189998 222756 193009 191824 129404.1 237049 175114.1 154004.8 258793 TRUE FALSE 246116.8636 180562.9756 230182.5739 177239.5473 184292.0259 134328.6637 205924.1816 198002.1141 167399.8591 250348.6056 0.983096603 0.721246181 0.919448196 0.707970979 0.736141611 0.536566455 0.822549744 0.7909056 0.668667032 1 17.93357889 -1.789093848 1.084147747 0.748471423 199.9999994 0.185762313 0.12519364 2558.017478 4.346593792 0.038327717 1265785.246 0.016251975 1.789093848 199.251528 IQPS(ph)FQSPVK ddPTM_A459_MK2206_30min_R2 1 IQPSFQSPVK 10 0 H0Y3G1;Q5TGL8 H0Y3G1 PXDC1 PX domain-containing protein 1 1 IQPS(0.641)FQS(0.359)PVK 104.07 0.010958 0 13204 17144 15000 14441 12262 10565 17901 13416 13943 16977 TRUE FALSE 14214.90839 16292.65389 15500.09251 13261.12411 11780.53227 10967.05848 15550.5772 15169.51726 15155.73694 16423.04188 0.86554662 0.992060667 0.943801558 0.807470638 0.717317313 0.667784845 0.946875573 0.923672811 0.922833726 1 14.00343375 -9.867436357 9.472423744 1.000000058 0.86356102 0.14038816 0.099942136 0 0 0.109063169 0.026451704 1.36E-10 9.867436357 -0.136439039 IQPS(ph)SPPPNHPNNHLFR ddPTM_A459_MK2206_30min_R2 1 IQPSSPPPNHPNNHLFR 17 0 H0Y4E8;Q9Y2K2-7;Q9Y2K2;Q9Y2K2-8 H0Y4E8 SIK3 Serine/threonine-protein kinase SIK3 1 IQPS(0.5)S(0.5)PPPNHPNNHLFR 53.981 0.043738 9763800 42259 45077 45702 56003 51425 47824 56124 41658 47490 53565 TRUE FALSE 45494.38153 42838.54173 47225.68187 51427.37576 49405.79611 49643.97583 48754.85138 47102.84363 51620.59436 51817.17844 0.87797875 0.826724708 0.911390456 0.992477346 0.95346365 0.95806019 0.940901316 0.909019847 0.996206199 1 15.66114284 -5.498751747 4.697723341 0.958718182 0.854259751 0.702213638 0.02906239 0.103564624 5.787531057 0.007662166 0.015498271 3.17E-06 5.498751747 -0.104458431 IQQALT(ph)SPLPMTPILEGSHR ddPTM_A459_MK2206_30min_R1 1 IQQALTSPLPMTPILEGSHR 20 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 IQQALT(0.504)S(0.496)PLPMTPILEGSHR 85.013 0.0033592 5699300 1905.9 1564.3 1481 1446.9 1481.2 1481.6 1534.6 1424.8 1170 1242.5 TRUE FALSE 1743.793197 1462.463786 1380.473846 1558.340489 1422.200668 1565.486912 1432.229634 1412.343124 1291.625687 1396.43028 1.248750633 1.047287363 0.988573412 1.115945787 1.018454475 1.121063424 1.025636334 1.011395373 0.924948209 1 10.44752783 -4.763899407 5.078092788 1.031618381 1.261643258 0.594475325 0.054742474 0.120054183 8.396359946 0.013776519 0.098293266 1.72E-05 4.763899407 0.230024877 IQQALTSPLPMT(ph)PILEGSHR ddPTM_A459_MK2206_30min_R2 1 IQQALTSPLPMTPILEGSHR 20 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 IQQALT(0.001)S(0.001)PLPMT(0.998)PILEGSHR 83.09 0.0041324 6230400 15435 12400 16545 12201 14494 14290 12174 10121 14144 13963 TRUE FALSE 16616.71547 11784.23403 17096.60204 11204.13927 13924.89273 14833.81596 10575.53918 11443.84945 15374.21955 13507.38845 1.230194536 0.872428751 1.265722245 0.829482273 1.030909327 1.098200145 0.782944772 0.84722887 1.138208145 1 13.72146115 -5.771936402 24.99990204 0.955841847 1.097746567 0.19724766 0.14672827 365.9103255 871459.676 0.040342327 0.06055683 1.69E-06 5.771936402 0.14190472 IQQFDDGGS(ph)DEEDIWEEK ddPTM_A459_MK2206_30min_R2 2 IQQFDDGGSDEEDIWEEK 18 0 E9PQP7;Q5H9R7-2;Q5H9R7;Q5H9R7-5;H0YEN2;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-3 E9PQP7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 IQQFDDGGS(1)DEEDIWEEK;IQQFDDGGS(1)DEEDIWEEK 142.54 0.00019883 3553400 41771 45315 44079 41974 42484 33844 49912 33331 33725 47418 TRUE FALSE 44969.01988 43064.72299 45548.57186 38544.58993 40815.8647 35131.95714 43358.49444 37687.47614 36658.33954 45870.75454 0.980341839 0.938827439 0.992976294 0.840286808 0.889801467 0.765890108 0.945231769 0.8216014 0.799165828 1 15.48528702 -5.763693316 24.99991838 0.858685696 0.967526426 0.339926921 0.066280555 60.60453707 672216.8801 0.01739039 0.027268704 1.72E-06 5.763693316 0.10884073 IQQNQS(ph)IR ddPTM_A459_MK2206_30min_R1 2 IQQNQSIR 8 0 E9PF63;O75116;Q14DU5 E9PF63 ROCK2 Rho-associated protein kinase 2 1 IQQNQS(1)IR;IQQNQS(1)IR 123.11 0.0060721 42338000 3866.3 4723 5510 5006.1 4776.3 4596.3 5532.8 5082.7 3611.8 4206.4 TRUE FALSE 3537.450882 4415.531842 5135.996552 5391.670689 4586.049857 4856.538534 5163.717007 5038.26249 3987.259535 4727.520589 0.748267684 0.934005841 1.086403846 1.140485925 0.970075068 1.027290827 1.092267482 1.065730417 0.843414526 1 12.20686803 -4.860150443 2.943122715 1.034209881 0.724569231 0.54364687 0.077928033 0.246303807 3.408971723 0.020166937 0.167015202 1.38E-05 4.860150443 -0.30964065 IQQNQS(ph)IR ddPTM_A459_MK2206_30min_R2 2 IQQNQSIR 8 0 E9PF63;O75116;Q14DU5 E9PF63 ROCK2 Rho-associated protein kinase 2 1 IQQNQS(1)IR;IQQNQS(1)IR 92.239 0.025743 70077000 62044 117540 71624 114737 83715 116843 100655 71736 124539 75444 TRUE FALSE 66794.13634 111703.1345 74011.90841 105362.6201 80427.92847 121289.5422 87438.87759 81112.14151 135371.1771 72982.26846 0.915210472 1.530551693 1.014108084 1.443674228 1.102020123 1.661904252 1.198083856 1.111395182 1.854850225 1 16.15525837 -4.741117032 24.36226726 1.321279623 0.915208482 0.164389944 0.27647358 1939.244822 2324583.857 0.063511671 2.512098831 1.82E-05 4.741117032 -0.406071141 IQRPNTTQEGEEMETDMDVADVAMESS(ph)PGSSISMEHR ddPTM_A459_MK2206_30min_R1 1 IQRPNTTQEGEEMETDMDVADVAMESSPGSSISMEHR 37 1 A0A087X1S3 A0A087X1S3 HUWE1 1 IQRPNTTQEGEEMETDMDVADVAMES(0.251)S(0.721)PGS(0.02)S(0.007)IS(0.001)MEHR 136.76 5.67E-35 6453500 712.05 517.57 629.3 348.94 839.23 1008.3 655.13 805.29 535.17 425.05 TRUE FALSE 651.4864084 483.8760989 586.5848693 375.8154193 805.801692 1065.389075 611.4274731 798.2494344 590.8028366 477.708403 1.363774228 1.012911006 1.22791407 0.786704644 1.68680661 2.230207943 1.279917768 1.670997264 1.236743656 1 8.899986444 -6.277495109 24.68420585 1.574757153 1.101052621 0.255367528 0.342733475 854.7514835 1314098.691 0.105119472 0.119579459 5.28E-07 6.277495109 -0.473704532 IQS(ph)TPVK ddPTM_A459_MK2206_30min_R2 3 IQSTPVK 7 0 E7END7;P62820-2;P62820;P62820-3 E7END7 RAB1A Ras-related protein Rab-1A 1 IQS(0.747)T(0.253)PVK;IQS(0.724)T(0.276)PVK;IQS(0.5)T(0.5)PVK 106.6 0.017053 120226000 1263060 851900 843120 955300 928340 830930 1226320 774620 833860 966990 TRUE FALSE 1359760.845 809595.8848 871229.2 877248.9341 891888.7071 862551.6234 1065302.711 875865.4937 906387.6355 935437.1955 1.453609982 0.865473266 0.931360442 0.937795651 0.953445845 0.922083949 1.138828685 0.936316728 0.968945473 1 19.83528127 -4.754531578 24.99994653 0.961955662 1.453610824 0.825901992 0.067770581 96.48515715 349157.64 0.017191426 0.166296158 1.76E-05 4.754531578 0.491655162 IQSSLSSAS(ph)PSK ddPTM_A459_MK2206_30min_R1 4 IQSSLSSASPSK 12 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 IQSSLS(0.001)S(0.008)AS(0.984)PS(0.008)K;IQSSLSS(0.006)AS(0.945)PS(0.049)K;IQSSLS(0.001)S(0.001)AS(0.985)PS(0.013)K;IQSSLS(0.003)S(0.002)AS(0.94)PS(0.055)K 209.22 7.32E-06 80447800 10095.2 10658.3 10852.6 9793.6 8999.5 7838 8795.2 9472.7 9098.2 8883 TRUE FALSE 9236.550228 9964.442733 10115.95575 10547.90477 8641.030858 8281.780787 8208.488256 9389.881183 10043.99045 9983.493103 0.925182212 0.998091813 1.013268166 1.056534487 0.86553181 0.829547404 0.822206033 0.940540659 1.006059737 1 13.28532897 -4.39072356 13.06998826 0.942536413 0.000250964 0.003257473 0.078486834 761137.9487 752869.7582 0.022055007 20975367.15 4.07E-05 4.39072356 -0.942285449 IQSSLSSAS(ph)PSK ddPTM_A459_MK2206_30min_R2 2 IQSSLSSASPSK 12 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 IQSSLS(0.002)S(0.024)AS(0.973)PS(0.001)K;IQSSLS(0.006)S(0.073)AS(0.83)PS(0.091)K 210.02 6.45E-06 104977000 393630 385710 368130 414790 417310 333410 483340 341930 349990 435680 TRUE FALSE 423766.6155 366556.2023 380403.2705 380900.3302 400924.3126 346098.1512 419876.8774 386621.425 380431.4976 421463.7973 1.005463858 0.869721681 0.902576385 0.90375575 0.951266313 0.82118121 0.996234742 0.917330095 0.902643359 1 18.68504919 -14.52286109 0.489262687 3.460345864 0.91615052 0.175736989 0.052288325 3651.746059 17.99804173 9818.325245 0.024121911 3.00E-15 14.52286109 -2.544195344 IQVLQQQADDAEER ddPTM_A459_MK2206_30min_R2 2 IQVLQQQADDAEER 14 0 P06753-2;A0A087WWU8;P06753-5;P06753-3;P06753-6;P06753-4;D6R904;Q5VU61 P06753-2 TPM3 Tropomyosin alpha-3 chain 0 ; 234.87 7.94E-13 16195300 27885 33372 30046 33541 32802 34286 36708 25946 28666 34353 FALSE TRUE 30019.89704 31714.79501 31047.71864 30800.59301 31514.02866 35590.77776 31888.19551 29337.23129 31159.31686 33232.06442 0.903341323 0.954343209 0.934269934 0.926833573 0.948301865 1.070977033 0.959561076 0.882798941 0.937628083 1 15.0202883 -6.526244612 24.99976665 0.967474116 0.932507033 0.144463734 0.046105127 258.829603 1922416.992 0.016578236 0.016664965 2.98E-07 6.526244612 -0.034967082 IQVWHEEHR ddPTM_A459_MK2206_30min_R1 5 IQVWHEEHR 9 0 P26038 P26038 MSN Moesin 0 ;;;; 137.46 0.0035848 53258400 9540.6 9631.2 9639.9 8945.1 10617.9 10241.9 10785.6 9345.8 8657.9 8533.7 FALSE TRUE 8729.12187 9004.207129 8985.570446 9634.053152 10194.96656 10821.78753 10066.1123 9264.090656 9557.919688 9590.919182 0.910144451 0.938826296 0.936883137 1.004497376 1.062981177 1.128336849 1.04954615 0.965923128 0.996559298 1 13.22745337 -5.837747644 3.02373347 1.037576212 0.927064917 0.554545944 0.042148783 0.210386109 3.874594269 0.014082544 0.023254836 1.45E-06 5.837747644 -0.110511295 IQVWHEEHR ddPTM_A459_MK2206_30min_R2 4 IQVWHEEHR 9 0 P26038 P26038 MSN Moesin 0 ;;; 94.309 0.013205 78666000 53539.4 71669.2 63236 74294 58609.9 61243 68074.2 54968.4 63335.9 61319.8 FALSE TRUE 57638.41763 68110.21174 65344.25668 68223.94255 56308.58083 63573.64528 59135.97577 62152.95861 68844.7421 59318.93995 0.971669718 1.148203454 1.101574923 1.15012073 0.9492513 1.071725916 0.996915586 1.047775949 1.160586183 1 15.8562052 -6.23414054 24.9965878 1.03975908 1.097463191 0.129300381 0.069628765 1525.235581 1396604.986 0.020142409 0.025997037 5.83E-07 6.23414054 0.057704112 IRAEEEDLAAVPFLAS(ph)DNEEEEDEKGNSGSLIR ddPTM_A459_MK2206_30min_R1 1 IRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIR 33 2 A0A3B3IRP6;A0A0J9YVP0;O95714 A0A3B3IRP6 HERC2 E3 ubiquitin-protein ligase HERC2 1 IRAEEEDLAAVPFLAS(1)DNEEEEDEKGNSGSLIR 99.29 2.09E-11 9144400 1615.1 1504.8 2024.4 1960.8 1361.1 1407.2 1299.6 1677.6 1321.6 1088.3 TRUE FALSE 1477.727264 1406.837246 1886.989368 2111.821156 1306.884505 1486.874448 1212.906055 1662.93292 1458.985049 1223.12682 1.208155393 1.150197366 1.542758557 1.72657579 1.068478332 1.215633917 0.991643741 1.359575224 1.192832195 1 10.25635828 IRAEEEDLAAVPFLAS(ph)DNEEEEDEKGNSGSLIR ddPTM_A459_MK2206_30min_R2 1 IRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIR 33 2 A0A3B3IRP6;A0A0J9YVP0;O95714 A0A3B3IRP6 HERC2 E3 ubiquitin-protein ligase HERC2 1 IRAEEEDLAAVPFLAS(1)DNEEEEDEKGNSGSLIR 84.683 1.24E-08 4707300 7094.2 14397 10366 12861 14682 9334.8 14363 8916.8 10074 12049 TRUE FALSE 7637.337407 13682.06592 10711.59727 11810.21516 14105.51091 9690.042355 12477.12085 10082.25638 10950.21831 11655.84212 0.655236861 1.173837615 0.918989564 1.013244263 1.210166607 0.831346398 1.070460694 0.864995963 0.939461791 1 13.50876562 -10.51178849 14.73882336 0.999999999 0.974014448 0.001167046 0.156402677 0 0 0.141504655 0.03431992 3.08E-11 10.51178849 -0.025985551 IRAENGTGSS(ph)PR ddPTM_A459_MK2206_30min_R1 1 IRAENGTGSSPR 12 1 M0R102;M0R050;Q9NQT4 M0R102 EXOSC5 Exosome complex component RRP46 1 IRAENGTGS(0.04)S(0.96)PR 109.95 0.0040818 16226000 7110.3 6935.6 8030.3 7221.7 7941.2 5909.9 6900.3 7594 3482.7 3864.4 TRUE FALSE 6505.531647 6484.091179 7485.22561 7777.916585 7624.885188 6244.513431 6439.993577 7527.606459 3844.739128 4343.151047 1.497882891 1.492946276 1.723455051 1.790846439 1.755611331 1.43778408 1.48279291 1.733213139 0.885241864 1 12.08452641 -8.264635011 24.99993995 0.942620831 1.614234421 0.818097024 0.126692219 122.7619725 960362.1695 0.115524166 0.034684866 5.44E-09 8.264635011 0.67161359 IRAENGTGSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 IRAENGTGSSPR 12 1 M0R102;M0R050;Q9NQT4 M0R102 EXOSC5 Exosome complex component RRP46 1 IRAENGTGS(0.111)S(0.889)PR 105.36 0.0051451 22292000 25313 41231 36760 45075 52537 41573 32576 30821 41477 24812 TRUE FALSE 27250.98274 39183.5285 37985.56005 41392.22831 50474.1334 43155.08965 28298.73207 34849.41052 45084.59449 24002.38647 1.13534472 1.632484692 1.582574303 1.724504701 2.102879789 1.797949954 1.178996601 1.451914399 1.878337995 1 14.55089023 -10.73164063 3.467494149 0.998958437 1.615478408 0.294240584 0.283020791 204072847.2 316635381.4 2450161.539 0.076579 1.86E-11 10.73164063 0.616519971 IREEFPDR ddPTM_A459_MK2206_30min_R1 2 IREEFPDR 8 1 P04350;M0QYM7;K7ESM5;Q9BUF5;M0R042;K7ES63 P04350 TUBB4A;TUBB6 Tubulin beta-4A chain;Tubulin beta-6 chain 0 ; 141.52 0.0064051 43999000 8132.6 8161.4 8294.3 6601.4 8069.4 7170.1 8513.3 7165.1 7159.1 6452.2 FALSE TRUE 7440.879664 7630.091377 7731.306025 7109.840972 7747.978711 7576.064866 7945.39329 7102.456286 7903.314064 7251.547248 1.026109244 1.052201843 1.066159505 0.980458477 1.068458695 1.0447515 1.095682483 0.979440117 1.08987969 1 12.82407314 -4.735999938 22.28524226 1.042688986 1.026108962 0.013438164 0.040050431 3500.061941 3065461.534 0.009274257 0.497066119 1.84E-05 4.735999938 -0.016580024 IREEFPDR ddPTM_A459_MK2206_30min_R2 1 IREEFPDR 8 1 P04350;M0QYM7;K7ESM5;Q9BUF5;M0R042;K7ES63 P04350 TUBB4A;TUBB6 Tubulin beta-4A chain;Tubulin beta-6 chain 0 106.68 0.03839 13581000 51370 60051 61028 65861 59661 57192 61449 48341 55146 50357 FALSE TRUE 55302.9267 57068.95466 63062.64306 60479.94562 57318.40937 59368.48164 53380.67249 54659.33468 59942.4994 48713.85521 1.135260727 1.171513821 1.2945525 1.241534782 1.176634637 1.218718604 1.095800615 1.122049044 1.230502064 1 15.57204454 -7.254544463 24.66440061 1.122258684 1.209040047 0.323149565 0.066126824 607.6567782 2173706.48 0.025810313 0.019505477 5.56E-08 7.254544463 0.086781363 IREEYPDR ddPTM_A459_MK2206_30min_R1 7 IREEYPDR 8 1 P68371;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P07437;Q5JP53;Q5ST81;Q9BVA1;Q13885;Q3ZCM7;A0A075B736;Q5SQY0 P68371;P07437;Q9BVA1;Q3ZCM7 TUBB4B;TUBB1;TUBB;TUBB2B;TUBB2A;TUBB8 Tubulin beta-4B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-8 chain 0 ;;;;;; 141.52 0.0064051 965065600 27134.1 27852.3 29099.6 24597.6 29343.7 26012 27154 26008.3 23399.6 22358.5 FALSE TRUE 24826.20231 26039.11021 27124.40023 26492.11141 28174.87829 27484.77696 25342.60621 25780.91218 25832.07216 25128.43978 0.987972295 1.036240628 1.079430337 1.054268058 1.121234686 1.093771727 1.00852287 1.025965496 1.028001435 1 14.61703348 -7.278163657 24.59257788 1.017786238 1.064087587 0.307282222 0.03408983 963.0225518 1416092.12 0.015506764 0.010488151 5.27E-08 7.278163657 0.04630135 IREEYPDR ddPTM_A459_MK2206_30min_R2 4 IREEYPDR 8 1 P68371;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P07437;Q5JP53;Q5ST81;Q9BVA1;Q13885;Q3ZCM7;A0A075B736;Q5SQY0 P68371;P07437;Q9BVA1;Q3ZCM7 TUBB4B;TUBB1;TUBB;TUBB2B;TUBB2A;TUBB8 Tubulin beta-4B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-8 chain 0 ;;; 153.08 0.0025668 1035204000 749497 820438 789104 847993 810235 902200 834965 710935 789788 781428 FALSE TRUE 806879.0666 779696.2419 815412.3335 778709.2593 778421.1028 936533.8532 725333.0925 803856.6455 858482.3326 755930.0684 1.067399089 1.031439646 1.078687524 1.030133992 1.029752798 1.238915996 0.959524066 1.063400808 1.135663692 1 19.52789325 -4.388269392 19.35411028 1.064759127 2.133705291 0 0.073726936 17427.3407 2022210.39 0.017175971 159795.6285 4.09E-05 4.388269392 1.068946165 IRIDS(ph)LSAQLSQLQK ddPTM_A459_MK2206_30min_R1 2 IRIDSLSAQLSQLQK 15 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 IRIDS(0.955)LS(0.045)AQLSQLQK;IRIDS(0.986)LS(0.014)AQLSQLQK 117.03 0.0012038 12430100 9064.5 8131.3 8507 7770.4 10119.8 9668.9 7779.6 8428.4 5919.4 5174 TRUE FALSE 8293.516675 7601.950892 7929.568542 8368.877554 9716.706937 10216.34476 7260.637079 8354.711387 6534.742813 5814.994182 1.426229574 1.307301547 1.363641698 1.439189326 1.67097449 1.756896816 1.248606078 1.436753181 1.123774609 1 12.50556203 -8.324823256 1.560874135 0.994348793 1.471815176 0.548368491 0.145441923 0.311168622 1.507717284 0.150261975 0.045075822 4.73E-09 8.324823256 0.477466382 IRIDSLS(ph)AQLSQLQK ddPTM_A459_MK2206_30min_R2 1 IRIDSLSAQLSQLQK 15 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 IRIDS(0.429)LS(0.571)AQLS(0.001)QLQK 72.184 0.025696 1839000 10289 22281 19537 21122 23105 21878 19555 16058 23113 16994 TRUE FALSE 11076.73375 21174.55794 20188.35383 19396.26503 22197.78161 22710.58262 16987.40501 18156.83574 25123.32696 16439.48717 0.673788278 1.288030321 1.228040365 1.179858279 1.350272145 1.381465394 1.033329375 1.10446485 1.528230577 1 14.00487767 -4.758226769 24.98614245 1.236203283 0.673787497 0.539701572 0.154798269 68.42856169 532115.2426 0.037418636 0.260516986 1.74E-05 4.758226769 -0.562415785 IRLDETDDPDDYGDR ddPTM_A459_MK2206_30min_R1 2 IRLDETDDPDDYGDR 15 1 P07384 P07384 CAPN1 Calpain-1 catalytic subunit 0 ; 188.63 5.58E-05 20194300 7460.5 7585.8 7775.5 6279.8 6592 7185.8 8899.9 7019.4 8123.2 9957.8 FALSE TRUE 6825.945298 7091.963041 7247.720724 6763.471284 6329.426681 7592.653786 8306.20391 6958.030126 8967.635709 11191.44744 0.609925153 0.633694889 0.647612452 0.604342854 0.565559255 0.678433583 0.742192103 0.621727454 0.801293645 1 13.45010902 -8.927198921 0.575688518 1.013064188 0.616835593 0.861376428 0.045631007 0.542399051 0.340554621 0.059417283 0.020898229 1.18E-09 8.927198921 -0.396228595 IRLS(ph)PEPWTPETGLVTDAFK ddPTM_A459_MK2206_30min_R1 1 IRLSPEPWTPETGLVTDAFK 20 1 O95573 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 1 IRLS(0.999)PEPWT(0.001)PETGLVTDAFK 85.855 0.0012954 8672300 2083.8 2366.5 2088.4 1606.6 2185.6 1928.6 2124.7 2102.8 2187.2 2107.7 TRUE FALSE 1906.561868 2212.44042 1946.645227 1730.34061 2098.542924 2037.795665 1982.96514 2084.415441 2414.567267 2368.817788 0.804857966 0.933985058 0.821779217 0.730465897 0.885903059 0.860258512 0.837111723 0.879939121 1.019313211 1 11.20995151 -8.165391344 3.355357807 1.012088387 0.841221262 0.638638886 0.050406854 0.163113221 3.281843686 0.042528764 0.013621659 6.83E-09 8.165391344 -0.170867125 IRPLS(ph)DGNSPWSTILIK ddPTM_A459_MK2206_30min_R1 3 IRPLSDGNSPWSTILIK 17 1 Q5TCX8;Q5TCX8-3 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 IRPLS(1)DGNSPWSTILIK;IRPLS(0.991)DGNS(0.008)PWSTILIK;IRPLS(0.993)DGNS(0.007)PWSTILIK 131.25 0.00054846 40770000 13891.3 14063.1 14066.3 11692.5 13825.7 12703.7 13617.7 12886.7 11644.6 11825 TRUE FALSE 12709.77199 13147.58963 13111.51875 12593.05838 13274.99309 13422.97252 12709.28808 12774.03294 12855.09784 13289.97027 0.956343146 0.98928661 0.986572466 0.947561064 0.998873046 1.010007715 0.956306735 0.961178443 0.967278149 1 13.69805026 -4.742013832 23.81964041 0.978490378 0.956343011 0.108355766 0.019817902 1918.45356 2352185.705 0.005100635 0.173364553 1.81E-05 4.742013832 -0.022147367 IRPLS(ph)DGNSPWSTILIK ddPTM_A459_MK2206_30min_R2 1 IRPLSDGNSPWSTILIK 17 1 Q5TCX8;Q5TCX8-3 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 IRPLS(1)DGNSPWSTILIK 124.82 0.00071144 33993000 37105 37956 33257 37129 35965 34303 45613 26184 33961 36429 TRUE FALSE 39945.78733 36071.16023 34365.77178 34095.44193 34552.83339 35608.4247 39623.95831 29606.3387 36914.86639 35240.32471 1.133524951 1.023576273 0.975183176 0.967512139 0.980491345 1.01044542 1.124392543 0.840126728 1.047517771 1 15.1049396 -4.782164595 3.023818215 0.991596044 1.156365295 0.280941067 0.067188459 0.482920138 6.436457727 0.01663719 0.19469993 1.65E-05 4.782164595 0.164769251 IRPVS(ph)LPVDR ddPTM_A459_MK2206_30min_R2 2 IRPVSLPVDR 10 1 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 IRPVS(1)LPVDR;IRPVS(1)LPVDR 94.688 0.012961 16481100 50336 57774 56426 53657 64242 69188 60334 46273 47128 53682 TRUE FALSE 54189.76286 54905.02717 58307.21468 49273.05146 61719.53629 71820.99782 52412.07333 52321.03998 51227.10825 51930.36074 1.043508308 1.057281837 1.122796257 0.94882937 1.188505826 1.383025205 1.009276126 1.007523137 0.986457778 1 15.66429063 -7.47964712 24.99917629 0.999873568 1.122564784 0.243880854 0.106358923 749.2844314 433283.3017 0.048102454 0.032428085 3.31E-08 7.47964712 0.122691215 IRQEVGPPLPPLLAPLIAT(ph)PPR ddPTM_A459_MK2206_30min_R1 2 IRQEVGPPLPPLLAPLIATPPR 22 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 IRQEVGPPLPPLLAPLIAT(1)PPR;IRQEVGPPLPPLLAPLIAT(1)PPR 138.12 1.74E-05 25857000 2731.89 3237.2 3081.37 2723.35 3318.7 2773.73 3029.33 3275.36 2390.48 2132.6 TRUE FALSE 2499.52841 3026.457692 2872.21519 2933.102889 3186.509152 2930.776196 2827.248923 3246.723873 2638.97895 2396.802588 1.042859525 1.262706285 1.19835284 1.223756559 1.329483357 1.222785811 1.179591902 1.354606295 1.10104143 1 11.22689537 -8.513574514 10.88347722 1.000000442 1.228611809 0.456978381 0.080679765 0.274393571 311.7499766 0.07461847 0.019270092 3.06E-09 8.513574514 0.228611368 IRS(ph)SVEK ddPTM_A459_MK2206_30min_R2 1 IRSSVEK 7 1 Q13427;E9PG73 Q13427 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IRS(0.875)S(0.125)VEK 68.626 0.03957 38125000 265790 179780 186430 160410 187100 125130 209660 342850 209290 269060 TRUE FALSE 286139.0868 170852.3866 192645.4832 147303.9899 179753.5139 129891.9098 182131.3902 387661.6722 227493.6659 260280.5942 1.099348523 0.656416154 0.740145395 0.565943037 0.690614352 0.499045694 0.69975017 1.489399059 0.874032375 1 17.98970823 -7.684018579 12.84767153 1.136126921 0.692243276 0.451207341 0.208484863 0.592603089 96.3881073 0.094061056 0.054283624 2.07E-08 7.684018579 -0.443883645 IRSS(ph)VGPVR ddPTM_A459_MK2206_30min_R1 3 IRSSVGPVR 9 1 Q9NTI2 Q9NTI2 ATP8A2 Phospholipid-transporting ATPase IB 1 IRS(0.222)S(0.778)VGPVR;IRS(0.051)S(0.949)VGPVR;IRS(0.243)S(0.757)VGPVR 74.698 0.033521 131851400 7717.7 6869.5 7716.9 7055.5 7733.2 7284.4 7589.4 7705.8 5954.7 5710.36 TRUE FALSE 7061.269088 6422.294301 7193.098329 7598.915833 7425.170269 7696.836433 7083.124974 7638.429003 6573.712374 6417.802508 1.100262758 1.000699896 1.120803939 1.184037032 1.156964593 1.199294684 1.103668267 1.190193839 1.024293341 1 12.64786368 -5.417168101 6.898350843 1.13570965 1.05129538 0.131622947 0.06828522 0.365741621 20.73727703 0.016831282 0.035292017 3.83E-06 5.417168101 -0.08441427 IRSS(ph)VGPVR ddPTM_A459_MK2206_30min_R2 1 IRSSVGPVR 9 1 Q9NTI2 Q9NTI2 ATP8A2 Phospholipid-transporting ATPase IB 1 IRS(0.048)S(0.952)VGPVR 87.641 0.017736 77898000 29532 40428 38540 38616 43620 50521 46274 30306 36508 35326 TRUE FALSE 31792.99263 38420.40431 39824.90436 35460.94927 41907.25963 52443.61206 40198.16821 34267.09826 39683.39985 34173.31551 0.930345568 1.124280853 1.165380174 1.037679509 1.226315299 1.534636346 1.176302844 1.002744327 1.161239384 1 15.06058261 -3.989667202 1.09033824 1.180747829 4.28E-10 0.179779666 0.145623647 14.74651313 4.089698102 0.048268161 30.44468978 0.000102408 3.989667202 -1.180747829 IS(ph)AEGGEQVER ddPTM_A459_MK2206_30min_R2 1 ISAEGGEQVER 11 0 J3KQL8;Q9BQE5 J3KQL8 APOL2 Apolipoprotein L2 1 IS(1)AEGGEQVER 83.243 0.038459 3742000 9095.7 10522 9596 5293.4 7758.4 7535.9 10073 9941.8 7716.4 14129 TRUE FALSE 9792.073785 9999.49278 9915.925851 4860.912287 7453.766233 7822.683955 8750.403 11241.2274 8387.558524 13667.97189 0.716424782 0.731600333 0.725486263 0.355642544 0.545345447 0.572336848 0.640212247 0.822450287 0.613665187 1 13.73851157 -9.145041431 0.668497798 1.006432736 0.61175654 0.449760498 0.121678003 2.151846378 1.468004871 0.175437058 0.050670342 7.16E-10 9.145041431 -0.394676195 IS(ph)APNVDFNLEGPK ddPTM_A459_MK2206_30min_R1 4 ISAPNVDFNLEGPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK 214.63 1.04E-06 1030762000 19168.4 35067.6 36081.3 33042.5 25941.8 25738.2 29119.3 28524.2 27961.8 25869.9 TRUE FALSE 17538.02692 32784.69287 33632.20188 35587.43908 24908.48317 27195.47464 27176.80463 28274.81593 30868.52917 29074.85852 0.603202485 1.127595955 1.15674516 1.223993542 0.856701784 0.935360515 0.934718379 0.972483354 1.061691466 1 14.82748455 -4.753111725 24.9993805 1.02774604 0.603201698 0.584334561 0.107956188 253.4194777 760699.4827 0.029904446 0.332325952 1.77E-05 4.753111725 -0.424544342 IS(ph)APNVDFNLEGPK ddPTM_A459_MK2206_30min_R2 4 ISAPNVDFNLEGPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK 177.67 7.07E-05 333674000 246448 315341 365132 357927 387859 247736 448205 280113 280588 332676 TRUE FALSE 265316.2484 299681.6245 377305.3186 328683.2191 372629.7068 257163.7671 389355.1451 316724.7309 304993.0371 321820.8094 0.824422289 0.931206484 1.172408084 1.021323698 1.157879466 0.799089927 1.209850742 0.984164857 0.947710739 1 18.29589809 -5.011415996 6.662680018 1.038607258 0.847970772 0.255261889 0.115078404 0.161570242 38.4099539 0.027739575 0.088909228 9.74E-06 5.011415996 -0.190636486 IS(ph)ASSATR ddPTM_A459_MK2206_30min_R1 4 ISASSATR 8 0 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30;P49023-2;P49023-3;A0A1B0GU60;P49023-4 A0A1B0GTU4 PXN Paxillin 1 IS(0.983)AS(0.013)S(0.004)ATR;IS(0.732)AS(0.267)S(0.001)ATR;IS(0.653)AS(0.346)S(0.001)ATR;IS(0.632)AS(0.367)S(0.001)ATR 128.6 0.0042872 441784000 13264.4 15832.7 15777.4 14664.3 15413.2 13833.6 14513.3 14106.4 10900 10533.8 TRUE FALSE 12136.19313 14801.98835 14706.47405 15793.74693 14799.25961 14616.84648 13545.14424 13983.06923 12033.09401 11838.80667 1.025119631 1.25029395 1.24222605 1.334065786 1.250063458 1.234655391 1.144130875 1.181121512 1.016411057 1 13.53123605 -8.144069832 1.306244903 0.990841462 1.22796191 0.514334452 0.077414115 0.347481669 1.100957929 0.07301485 0.02373937 7.18E-09 8.144069832 0.237120447 IS(ph)ASSATR ddPTM_A459_MK2206_30min_R2 4 ISASSATR 8 0 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30;P49023-2;P49023-3;A0A1B0GU60;P49023-4 A0A1B0GTU4 PXN Paxillin 1 IS(0.984)AS(0.015)S(0.001)ATR;IS(0.985)AS(0.006)S(0.009)ATR;IS(0.992)AS(0.008)SATR;IS(0.998)AS(0.001)SATR 106.88 0.013539 541809000 328533 447293 399649 388369 494470 412959 521442 356094 340902 442036 TRUE FALSE 353685.7391 425081.08 412973.0982 356638.0104 475054.6233 428674.4441 452976.039 402636.7085 370553.0398 427612.4015 0.82711759 0.994080337 0.965765017 0.834021673 1.110946786 1.002483657 1.059314551 0.941592683 0.866562893 1 18.70594417 -6.24712631 24.99617952 0.997304637 0.915914239 0.246323777 0.077574073 1393.867921 2434234.531 0.02364002 0.030375994 5.66E-07 6.24712631 -0.081390398 IS(ph)DAELEAELEK ddPTM_A459_MK2206_30min_R1 5 ISDAELEAELEK 12 0 Q8WUX9 Q8WUX9 CHMP7 Charged multivesicular body protein 7 1 IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK 234.83 1.29E-10 144827900 13695.65 18521.32 19685.6 16035.56 12359.36 11859.9 14619.4 15043.4 16346.7 16534.77 TRUE FALSE 12530.76305 17315.5787 18349.39632 17270.62161 11867.06052 12531.39729 13644.1665 14911.87714 18045.99796 18583.22214 0.674305185 0.931785595 0.987417369 0.929366365 0.638590037 0.674339315 0.734219631 0.802437652 0.971090903 1 14.18171305 -8.289361058 4.586602107 0.994080911 0.799940778 0.303891246 0.114602517 0.293164569 15.2271267 0.116032606 0.032720241 5.14E-09 8.289361058 -0.194140133 IS(ph)DAELEAELEK ddPTM_A459_MK2206_30min_R2 6 ISDAELEAELEK 12 0 Q8WUX9 Q8WUX9 CHMP7 Charged multivesicular body protein 7 1 IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK 206.66 4.25E-13 44307400 94531 99987.9 108368 105132.9 113327.4 83475.6 123612.2 81509.6 78562.6 105872.5 TRUE FALSE 101768.366 95022.64628 111980.935 96543.20577 108877.5969 86652.32245 107381.7697 92163.18458 85395.83294 102417.889 0.99365811 0.927793447 1.093372809 0.942640067 1.063072066 0.846066281 1.04846693 0.899873894 0.833798019 1 16.6441082 -6.75219318 24.99999438 0.927059756 1.001411976 0.211390335 0.075663386 338.0150784 913928.0556 0.024370212 0.024043489 1.77E-07 6.75219318 0.07435222 IS(ph)DAELEAELEKLSLSEGGLVPSSK ddPTM_A459_MK2206_30min_R1 2 ISDAELEAELEKLSLSEGGLVPSSK 25 1 Q8WUX9 Q8WUX9 CHMP7 Charged multivesicular body protein 7 1 IS(1)DAELEAELEKLSLSEGGLVPSSK;IS(0.997)DAELEAELEKLS(0.003)LSEGGLVPSSK 76.028 0.00016097 39619000 2748.5 3370.9 4144.5 3828.6 3262.1 2342.3 2171.76 3379 1705.1 1098.25 TRUE FALSE 2514.725642 3151.453797 3863.182887 4123.479435 3132.163649 2474.919002 2026.885853 3349.457759 1882.351247 1234.309501 2.037354196 2.553211973 3.129833225 3.340717568 2.537583682 2.005104068 1.642121243 2.713628758 1.525023703 1 10.26948848 -6.723401604 3.432221253 1.861556462 2.790561175 0.453492707 0.51833451 0.244930537 5.963821266 0.187223753 0.178679377 1.89E-07 6.723401604 0.929004712 IS(ph)DAHLADTMIGK ddPTM_A459_MK2206_30min_R2 2 ISDAHLADTMIGK 13 0 Q9Y657 Q9Y657 SPIN1 Spindlin-1 1 IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK 125.33 0.0011482 0 57625 58557 46284 56633 57627 53225 68147 52311 41682 56728 TRUE FALSE 62036.81431 55649.14453 47827.08546 52005.90274 55364.27443 55250.51467 59199.21704 59148.22731 45307.42502 54876.97001 1.130470839 1.014071012 0.871532912 0.947681746 1.008879944 1.006806948 1.078762494 1.07783333 0.825618197 1 15.74391321 -8.155735712 0.003520563 9.24E-06 1.982937735 0.018688152 0.088108991 82594.92062 272.7492573 76936.14947 76672.42389 6.99E-09 8.155735712 1.982928491 IS(ph)DSESEDPPR ddPTM_A459_MK2206_30min_R1 1 ISDSESEDPPR 11 0 Q96ST2;Q96ST2-3;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 1 IS(0.848)DS(0.145)ES(0.007)EDPPR 105.13 0.010866 0 1663 1959.2 2095.3 1617.2 1866.7 1432.2 1779.8 1644.6 2394.5 2573.1 TRUE FALSE 1521.553117 1831.655724 1953.076874 1741.757024 1792.345386 1513.289926 1661.072789 1630.221436 2643.416844 2891.875054 0.526147599 0.633379966 0.675366963 0.602293319 0.619786593 0.523290218 0.574393001 0.563724713 0.914084044 1 11.49778951 -8.340586638 4.041680681 0.990961949 0.592343345 0.911282689 0.046061519 0.063140253 1.833888807 0.046473037 0.012435412 4.56E-09 8.340586638 -0.398618603 IS(ph)EDETER ddPTM_A459_MK2206_30min_R2 2 ISEDETER 8 0 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5;G3V3T3 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 IS(1)EDETER;IS(0.997)EDET(0.003)ER 150.81 0.0012315 25450000 111742 74756 78892 80304 65393 56093 94691 78417 58392 81093 TRUE FALSE 120297.0534 71043.72575 81522.2199 73742.90632 62825.34225 58227.65842 82257.95796 88666.37115 63470.83061 78446.94205 1.533483018 0.905627726 1.039202011 0.940035448 0.800864133 0.742255299 1.048580809 1.130271861 0.809092476 1 16.25942959 -4.759677368 24.99959739 0.935906183 1.533483763 0.700154297 0.117475206 27.00426136 383028.6126 0.030850253 0.192644324 1.74E-05 4.759677368 0.59757758 IS(ph)EDETERNGDDGTHDK ddPTM_A459_MK2206_30min_R2 1 ISEDETERNGDDGTHDK 17 1 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5;G3V3T3 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 IS(0.998)EDET(0.002)ERNGDDGTHDK 91.547 0.0046049 49947000 57486 76060 78868 70305 55799 45611 83352 48263 36923 79326 TRUE FALSE 61887.17236 72282.971 81497.41976 64560.85661 53608.05089 47346.75857 72407.78228 54571.13981 40134.4958 76737.59912 0.806477829 0.941949863 1.062027229 0.841319736 0.698589108 0.616995568 0.943576332 0.711139525 0.523009532 1 16.22764601 -6.006595857 6.611702172 0.739980946 0.940200236 0.255440572 0.143731125 0.184731299 41.10287179 0.041247502 0.057658469 9.85E-07 6.006595857 0.20021929 IS(ph)EGLPTPTKMT(ph)PR ddPTM_A459_MK2206_30min_R2 1 ISEGLPTPTKMTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 IS(0.999)EGLPT(0.001)PT(0.061)KMT(0.939)PR 119 0.038943 0 23714 22371 24369 24167 25763 23934 32087 19924 22260 27061 TRUE FALSE 25529.56207 21260.08867 25181.4503 22192.47879 24751.41517 24844.82514 27873.93836 22528.13521 24196.13456 26178.00179 0.975229595 0.812135657 0.96193172 0.847752971 0.945504373 0.949072635 1.064784798 0.860575051 0.924292647 1 14.67606736 -6.474938625 13.39314004 0.956453102 0.897394829 0.157558448 0.066234553 4.688432997 1307.885357 0.020097514 0.022760161 3.35E-07 6.474938625 -0.059058273 IS(ph)ESPS(ph)EIMESLT(ph)KMYSIPK ddPTM_A459_MK2206_30min_R1 1 ISESPSEIMESLTKMYSIPK 20 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 3 IS(0.5)ES(0.5)PS(0.932)EIMES(0.068)LT(0.346)KMY(0.307)S(0.346)IPK 72.634 0.0085653 12893000 1551.6 1920.7 1788.6 1962.7 1541.6 1282.1 1372.5 1947.3 1274.2 975.63 TRUE FALSE 1419.628272 1795.662081 1667.194815 2113.867494 1480.194808 1354.691394 1280.943029 1930.274961 1406.65765 1096.49841 1.294692504 1.637633091 1.520471713 1.927834527 1.349928823 1.235470459 1.168212391 1.760399234 1.282863374 1 10.098688 -6.482666404 24.95769382 1.32526915 1.598610297 0.27724394 0.231959075 747.4198518 463884.4547 0.071693705 0.081280976 3.29E-07 6.482666404 0.273341147 IS(ph)FFLEK ddPTM_A459_MK2206_30min_R2 1 ISFFLEK 7 0 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 IS(1)FFLEK 99.815 0.020969 2301900 12072 10955 11649 10375 11656 9551.8 10975 6993.9 7836.6 11442 TRUE FALSE 12996.2416 10410.99063 12037.37185 9527.329312 11198.32687 9915.300442 9533.969317 7908.026744 8518.213303 11068.64848 1.174148915 0.940583726 1.087519571 0.860749109 1.011715829 0.895800464 0.861349002 0.714452786 0.769580254 1 13.43419145 -5.942076479 0.592559182 0.816026557 1.120287732 0.444194033 0.099732791 1.11819279 0.706037888 0.065072142 0.198569334 1.14E-06 5.942076479 0.304261175 IS(ph)FVEEDVHPK ddPTM_A459_MK2206_30min_R1 4 ISFVEEDVHPK 11 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK 129.76 0.0016691 20240500 28929.9 30938.3 27839.6 19495.4 19997.4 19557.4 20971.14 19775.3 24902.6 21148.7 TRUE FALSE 26469.26009 28924.21105 25949.92552 20996.93909 19200.86121 20664.72309 19572.19351 19602.40664 27491.31438 23768.76062 1.113615493 1.216900263 1.091766034 0.883383842 0.807819201 0.869406841 0.823441905 0.824713032 1.156615392 1 14.53677906 -5.664575464 3.873563372 0.892153088 1.163043992 0.52029268 0.102234469 0.160554209 4.518817576 0.028337339 0.051056418 2.16E-06 5.664575464 0.270890905 IS(ph)FVEEDVHPK ddPTM_A459_MK2206_30min_R2 3 ISFVEEDVHPK 11 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK 110.92 0.005651 18625700 131533 117889 112127 104150 92953 71726 120872 88215 66136 93975 TRUE FALSE 141603.2676 112034.8037 115865.2582 95640.61184 89303.19817 74455.58319 105001.3612 99745.00339 71888.38973 90908.60345 1.557644296 1.232389449 1.274524675 1.052052371 0.982340447 0.819015807 1.155021167 1.097200921 0.790776527 1 16.47212921 -4.483925683 0.673715637 0.972160427 2.108319083 0.709926769 0.115641616 2.590447882 0.672215879 0.051780529 2.467535274 3.28E-05 4.483925683 1.136158656 IS(ph)LPLPNFSSLNLR ddPTM_A459_MK2206_30min_R2 2 ISLPLPNFSSLNLR 14 0 P08670;B0YJC4 P08670 VIM Vimentin 1 IS(0.999)LPLPNFS(0.001)SLNLR;IS(0.998)LPLPNFS(0.002)SLNLR 120.21 0.0024188 0 7048.1 3287.2 5346.2 4758.5 5558.2 3269.9 5036.4 5597.6 4813.6 6948.2 TRUE FALSE 7587.707955 3123.962428 5524.43964 4369.715328 5339.95714 3394.338336 4375.11463 6329.225539 5232.278227 6721.480803 1.128874452 0.464772945 0.821908118 0.650112 0.794461414 0.504998591 0.650915291 0.941641541 0.778441296 1 12.71456339 -7.762475852 24.99994297 0.895031092 0.703245436 0.182735818 0.18223008 45.39793714 1094900.753 0.087383738 0.045731179 1.73E-08 7.762475852 -0.191785656 IS(ph)MENDYLGPRR ddPTM_A459_MK2206_30min_R1 1 ISMENDYLGPRR 12 1 Q8N9B5-2;Q8N9B5 Q8N9B5-2 JMY Junction-mediating and -regulatory protein 1 IS(1)MENDYLGPRR 75.102 0.025821 785190 1268.6 1285.7 1181.3 802.97 1365.5 1084.1 1088.4 1223.3 719.43 1029.9 TRUE FALSE 1160.698908 1202.000696 1101.116647 864.8148885 1311.109244 1145.480805 1015.794822 1212.604817 794.217323 1157.491787 1.002770751 1.038452894 0.95129543 0.747145594 1.132715807 0.989623268 0.877582747 1.047614186 0.686153744 1 10.17678624 -8.235980831 24.99669126 0.843076684 0.969947255 0.156047449 0.12101766 1220.768053 1198625.252 0.079075336 0.029863249 5.81E-09 8.235980831 0.126870571 IS(ph)MPDFDLHLK ddPTM_A459_MK2206_30min_R1 1 ISMPDFDLHLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)MPDFDLHLK 104.9 0.0079386 3184600 4689.4 4746.4 5239.8 4414.5 4890.1 4677.1 5251.1 4683.3 4944.1 4754.7 TRUE FALSE 4290.541905 4437.408497 4884.136975 4754.505555 4695.316962 4941.91336 4900.8087 4642.354402 5458.056888 5343.748132 0.802908707 0.830392524 0.913990864 0.889732345 0.878656113 0.924802823 0.917110721 0.868744987 1.02139112 1 12.3836363 -1.522878749 0.119005858 1.039857905 0.336628432 0.666341624 0.037176095 61.55086312 0.506249592 0.266083454 7.16536855 0.03 1.522878749 -0.703229473 IS(ph)MPDVDLHLK ddPTM_A459_MK2206_30min_R1 1 ISMPDVDLHLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)MPDVDLHLK 90.229 0.018063 0 3081.3 3299.3 3449.5 2746.6 3044 2936.7 3394.8 3265.3 2812.2 3235.4 TRUE FALSE 2819.219254 3084.51497 3215.357551 2958.143608 2922.751034 3102.973416 3168.339086 3236.751826 3104.538254 3636.225778 0.775314688 0.848273776 0.88425685 0.813520334 0.803787007 0.853350041 0.871326282 0.890140498 0.853780387 1 11.82822607 -14.52287875 0.160099756 1.591011355 0.802998847 0.736353435 0.029910616 72.14871286 0.661171858 13.45769174 0.133349741 3.00E-15 14.52287875 -0.788012508 IS(ph)MPDVDLHLK ddPTM_A459_MK2206_30min_R2 2 ISMPDVDLHLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)MPDVDLHLK;IS(1)MPDVDLHLK 104.9 0.0079386 3469000 34052 32783 39786 36227 38277 31489 47640 32102 36804 42877 TRUE FALSE 36659.0473 31155.04389 41112.44538 33267.13822 36774.05265 32687.33596 41384.81077 36297.84162 40005.14539 41477.927 0.883820623 0.751123456 0.991188527 0.802044379 0.886593311 0.788065806 0.997755041 0.87511224 0.964492401 1 15.34005617 -7.986028585 0.706099554 0.997145729 0.851467861 0.300095921 0.073422417 0.824119363 0.847715686 0.066192731 0.029963814 1.03E-08 7.986028585 -0.145677868 IS(ph)MSEVDLNVAAPK ddPTM_A459_MK2206_30min_R1 4 ISMSEVDLNVAAPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(0.908)MS(0.092)EVDLNVAAPK;IS(0.976)MS(0.024)EVDLNVAAPK;IS(0.888)MS(0.112)EVDLNVAAPK;IS(0.994)MS(0.006)EVDLNVAAPK 265.64 1.25E-36 351215000 17387.2 22945.7 21408.2 20200.2 17392.3 16563.1 18445.9 18751.9 16487.9 14817 TRUE FALSE 15908.32734 21451.93076 19955.07103 21756.0229 16699.52786 17500.88841 17215.40767 18587.95412 18201.87621 16652.64182 0.955303519 1.288199854 1.198312631 1.306460749 1.002815532 1.050937659 1.033794388 1.116216533 1.093032349 1 14.02346345 -6.277181992 24.98346528 1.054566897 1.195095917 0.333571794 0.094848253 921.6289047 1462617.892 0.028801263 0.032767132 5.28E-07 6.277181992 0.140529021 IS(ph)MSEVDLNVAAPK ddPTM_A459_MK2206_30min_R2 5 ISMSEVDLNVAAPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(0.992)MS(0.008)EVDLNVAAPK;IS(0.992)MS(0.008)EVDLNVAAPK;IS(0.998)MS(0.002)EVDLNVAAPK;IS(0.976)MS(0.024)EVDLNVAAPK;IS(0.99)MS(0.01)EVDLNVAAPK 241.39 1.26E-19 90451000 317711 339568 380729 375002 380387 292357 424361 265709 276011 298442 TRUE FALSE 342035.1984 322705.5469 393422.3148 344363.137 365451.0951 303482.8505 368641.891 300438.0786 300017.9379 288703.862 1.184726786 1.117773571 1.362719266 1.192790199 1.26583376 1.051190824 1.276885901 1.040644474 1.039189209 1 18.13923088 -7.810224035 9.446643752 1.029142859 1.205561954 0.507349879 0.081625524 0.313301249 57.17810962 0.043821737 0.021085781 1.55E-08 7.810224035 0.176419095 IS(ph)PDLNIK ddPTM_A459_MK2206_30min_R1 2 ISPDLNIK 8 0 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 IS(1)PDLNIK;IS(1)PDLNIK 129.89 0.0039608 30906000 9626 10475.8 8673.9 7398.1 7675.6 7224.9 9447.1 7223.4 9365.8 8957.1 TRUE FALSE 8807.258152 9793.823516 8085.139835 7967.902944 7369.864599 7633.967594 8816.901196 7160.246575 10339.40843 10066.77317 0.874883938 0.972886083 0.803151089 0.791505163 0.732098009 0.758333129 0.875841846 0.711275247 1.027082686 1 13.29731369 -8.27905103 24.83980018 1.013541417 0.816457961 0.53805817 0.073576327 714.7562821 1008095.119 0.074877194 0.019509391 5.26E-09 8.27905103 -0.197083456 IS(ph)PDLNIK ddPTM_A459_MK2206_30min_R2 3 ISPDLNIK 8 0 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 IS(1)PDLNIK;IS(1)PDLNIK;IS(1)PDLNIK 112.83 0.011004 39742900 140532 131910 128699 140879 123949 100709 160982 111804 86818 153725 TRUE FALSE 151291.238 125359.5412 132989.7604 129368.7351 119082.1395 104541.5516 139844.87 126417.1667 94369.27271 148708.9658 1.017364603 0.842985764 0.89429551 0.869945765 0.800773099 0.702994275 0.940392997 0.850097813 0.634590337 1 17.18213211 -1.52287988 0.832027824 0.821958556 57.95255318 0.215076063 0.101495776 924.5839687 2.785927541 0.034474078 99845.27681 0.029999922 1.52287988 57.13059463 IS(ph)PPIKEEETKGDSVEK ddPTM_A459_MK2206_30min_R2 1 ISPPIKEEETKGDSVEK 17 2 Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4;G3V5I6;A0A087WTC9;Q6PJT7-9;Q6PJT7-2;H0YJA2;Q6PJT7-3;Q6PJT7-11 Q6PJT7-5;Q6PJT7-9 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 IS(1)PPIKEEETKGDSVEK 87.654 0.01188 21400000 79010 71201 88359 68491 82460 43033 90126 78571 53302 93570 TRUE FALSE 85059.06635 67665.26188 91304.84496 62895.06621 79222.20607 44670.65097 78292.34794 88840.49947 57938.11161 90516.81856 0.939704551 0.747543528 1.008705856 0.694843977 0.875220841 0.49350664 0.864948075 0.981480579 0.640081175 1 16.46589826 -1.522900611 0.795816819 0.799031679 29.10265988 0.039782337 0.161953298 1879.900982 6.662082452 0.056731715 95884.68815 0.02999849 1.522900611 28.3036282 IS(ph)PSSLSNNYNNMNNR ddPTM_A459_MK2206_30min_R2 2 ISPSSLSNNYNNMNNR 16 0 Q9Y4E8 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 IS(0.909)PS(0.086)S(0.005)LSNNYNNMNNR;IS(0.972)PS(0.008)S(0.014)LS(0.006)NNYNNMNNR 119.77 0.0016567 11472300 37286 43958 42925 48416 44440 46698 43874 37958 41249 44195 TRUE FALSE 40140.64483 41775.10964 44356.09808 44460.25792 42695.06231 48475.12511 38113.2911 42919.24093 44836.76346 42752.92077 0.938898305 0.977128788 1.037498662 1.039934983 0.998646678 1.133843589 0.891478065 1.003890264 1.048741528 1 15.38373536 -5.001074668 3.454301967 1.018772289 0.941549849 0.171301364 0.0567409 0.423548791 10.36818213 0.014537897 0.064806027 9.98E-06 5.001074668 -0.07722244 IS(ph)QEHLADHFDSR ddPTM_A459_MK2206_30min_R2 1 ISQEHLADHFDSR 13 0 V9GY71;V9GYH5;P19174;P19174-2 V9GY71;P19174-2 PLCG1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1" 1 IS(1)QEHLADHFDSR 81.51 0.023094 2170100 10579 8885.2 9110.3 6751.4 10717 8815.1 10597 9784.9 6892.4 12444 TRUE FALSE 11388.93637 8443.973888 9414.032855 6199.789023 10296.19673 9150.564808 9205.601171 11063.82003 7491.888493 12037.9533 0.946085775 0.701445975 0.782029355 0.515020192 0.855311237 0.760142906 0.76471481 0.919078165 0.62235567 1 13.5553025 -11.45344809 2.765802228 1.15309756 0.761655732 0.249847778 0.123228715 24512781.35 15514341.35 24262959.12 0.030098109 3.52E-12 11.45344809 -0.391441828 IS(ph)RPGDSDDSR ddPTM_A459_MK2206_30min_R1 1 ISRPGDSDDSR 11 1 P14866;M0QXS5;A0A3B3ITJ4;P14866-2;M0QYL7;M0R1W6;B4DVF8 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 IS(0.937)RPGDS(0.062)DDS(0.001)R 75.509 0.029225 4355100 2075.9 2082.2 2347.7 1944.8 2735.4 2107.9 2497 2062.1 2068.5 1692.1 TRUE FALSE 1899.333804 1946.648402 2188.344665 2094.588833 2626.443226 2227.247476 2330.429686 2044.071277 2283.527977 1901.730123 0.998739927 1.023619692 1.150712522 1.101412239 1.38108094 1.171169058 1.225426078 1.074848241 1.200763426 1 10.89309681 -5.283423355 1.85903888 1.179989274 0.99031006 0.281776999 0.096071148 0.485148939 2.975511419 0.027139998 0.110831789 5.21E-06 5.283423355 -0.189679214 IS(ph)SIYAR ddPTM_A459_MK2206_30min_R1 1 ISSIYAR 7 0 G8JLG1;Q14683;V9GY57 G8JLG1 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A 1 IS(0.987)S(0.013)IYAR 99.136 0.021407 4582100 3540.2 4827.1 5150.2 4372.5 2348 1781.4 2752.7 2476.2 5352.9 4593.8 TRUE FALSE 3239.0874 4512.854913 4800.618773 4709.270708 2254.474188 1882.261329 2569.072406 2454.550844 5909.353111 5162.914625 0.627375743 0.874090555 0.929827263 0.912134143 0.436666951 0.364573398 0.497601179 0.475419607 1.144576957 1 12.33397003 -6.245542909 24.50363354 0.604705415 0.845300077 0.095563711 0.249346572 1161.643697 1790615.739 0.074159451 0.095394885 5.68E-07 6.245542909 0.240594662 IS(ph)SIYAR ddPTM_A459_MK2206_30min_R2 2 ISSIYAR 7 0 G8JLG1;Q14683;V9GY57 G8JLG1 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A 1 IS(0.96)S(0.04)IYAR;IS(0.998)S(0.002)IYAR 117.81 0.011325 7289900 37302 42851 38663 46049 33424 32825 40677 29676 26648 31352 TRUE FALSE 40157.8698 40723.08165 39952.00512 42286.6494 32111.60582 34074.17838 35336.06104 33554.75509 28965.79487 30328.98681 1.324075547 1.342711575 1.317287827 1.394265152 1.058776082 1.123485548 1.165092038 1.10635925 0.955053166 1 14.88840968 -6.589876096 0.606325898 1.011298171 1.379178075 0.754855895 0.073188946 0.456545151 0.368510121 0.059591143 0.080043206 2.57E-07 6.589876096 0.367879904 IS(ph)SKSPGHMVILDQTK ddPTM_A459_MK2206_30min_R2 1 ISSKSPGHMVILDQTK 16 1 Q9NWH9;Q9NWH9-3 Q9NWH9 SLTM SAFB-like transcription modulator 1 IS(0.333)S(0.333)KS(0.333)PGHMVILDQTK 82.578 0.008488 17919000 28306 123060 75886 110990 140730 116680 125220 85456 133340 63787 TRUE FALSE 30473.12912 116949.0193 78416.00136 101921.762 135204.2331 121120.3392 108778.4636 96625.39261 144937.6722 61705.63541 0.493846776 1.895272912 1.270807777 1.651741551 2.191116454 1.962873218 1.762861088 1.565908721 2.348856327 1 15.91311463 -4.757743748 24.98875223 1.761050763 0.493844966 0.488022169 0.381940927 88.11749877 595735.9941 0.091655177 0.663657543 1.75E-05 4.757743748 -1.267205797 IS(ph)SLLEEQFQQGK ddPTM_A459_MK2206_30min_R1 1 ISSLLEEQFQQGK 13 0 P62241;Q5JR95 P62241 RPS8 40S ribosomal protein S8 1 IS(0.631)S(0.369)LLEEQFQQGK 188.63 0.00014994 14276000 3000.3 3312.4 3351.1 2485.7 3290.2 2868.2 2795.6 3150.3 2808 2204 TRUE FALSE 2745.10873 3096.762158 3123.636669 2677.149045 3159.144367 3030.595005 2609.110625 3122.757259 3099.901649 2477.048159 1.108217747 1.250182459 1.261031868 1.080781992 1.275366551 1.223470361 1.053314452 1.260676845 1.251449891 1 11.2744062 -10.95523396 2.862616835 0.995332552 1.197008855 0.355050497 0.079261962 12884921.86 15004386.94 488375.9581 0.019373396 1.11E-11 10.95523396 0.201676303 IS(ph)SPTETER ddPTM_A459_MK2206_30min_R1 1 ISSPTETER 9 0 P31949 P31949 S100A11 "Protein S100-A11;Protein S100-A11, N-terminally processed" 1 IS(0.996)S(0.004)PTETER 129.88 0.0039781 6197500 1578.4 1885.2 1838.7 1416.8 1447.2 1486.6 2086.5 1930.9 1656.2 1474 TRUE FALSE 1444.148791 1762.473137 1713.894167 1525.922181 1389.55496 1570.770007 1947.313392 1914.018345 1828.367917 1656.610248 0.87174928 1.063903317 1.034578996 0.921111156 0.838794135 0.948183201 1.175480711 1.155382412 1.103680192 1 10.6940185 -7.250168203 24.25476547 1.121584362 0.949697616 0.515903531 0.076546222 400.1564388 861109.1239 0.031003677 0.023773914 5.62E-08 7.250168203 -0.171886745 IS(ph)SPTETER ddPTM_A459_MK2206_30min_R2 3 ISSPTETER 9 0 P31949 P31949 S100A11 "Protein S100-A11;Protein S100-A11, N-terminally processed" 1 IS(0.98)S(0.019)PT(0.001)ETER;IS(0.996)S(0.004)PTETER;IS(0.944)S(0.013)PT(0.042)ETER 92.538 0.02576 14854600 54138 66951 59911 73864 52079 63275 67818 58292 65027 67218 TRUE FALSE 58282.84691 63626.3107 61908.40284 67829.07492 50034.11678 65682.97446 58913.41514 65910.96455 70682.93092 65024.68216 0.896318828 0.978494759 0.952075439 1.043128127 0.769463458 1.01012373 0.906016195 1.013629938 1.087016938 1 15.98869982 -7.919627409 5.212924824 1.045827575 0.939564249 0.275440342 0.072923532 0.253205324 11.77552969 0.040099759 0.018529597 1.20E-08 7.919627409 -0.106263326 IS(ph)TPLTGVR ddPTM_A459_MK2206_30min_R1 1 ISTPLTGVR 9 0 Q08999;F5H837;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 IS(0.649)T(0.351)PLTGVR 128.35 0.0043454 7455200 5238 6239.7 5937.8 5730.6 5710.7 4774.9 4902.5 4856.4 4576.1 4947.1 TRUE FALSE 4792.480594 5833.494396 5534.75868 6171.971805 5483.230726 5045.250712 4575.46317 4813.941007 5051.801971 5559.984097 0.861959407 1.049192641 0.995463042 1.110070047 0.986195398 0.907421788 0.822927384 0.865819204 0.908600076 1 12.44086504 -6.755944361 3.94428715 0.885818844 1.010885674 0.315871583 0.072032943 0.221939175 7.659991973 0.0250982 0.023540327 1.75E-07 6.755944361 0.125066831 IS(ph)TPLTGVR ddPTM_A459_MK2206_30min_R2 2 ISTPLTGVR 9 0 Q08999;F5H837;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 IS(0.627)T(0.37)PLT(0.003)GVR;IS(0.638)T(0.361)PLT(0.001)GVR 117.71 0.0074468 31050000 177144 204848 185235 197169 195957 170858 221660 158147 166752 200129 TRUE FALSE 190706.2808 194675.5462 191410.6424 181059.662 188262.7436 177360.1209 192555.7757 178817.3559 181255.7875 193598.8071 0.985059173 1.005561703 0.988697427 0.935231289 0.972437518 0.916121972 0.994612408 0.923649058 0.936244341 1 17.56271054 -5.659563525 6.154261249 0.951826173 0.99555931 0.301307652 0.027179064 0.226480956 11.71538118 0.006951847 0.012131209 2.19E-06 5.659563525 0.043733138 IS(ph)TYGLPAGGIQPHPQTK ddPTM_A459_MK2206_30min_R2 2 ISTYGLPAGGIQPHPQTK 18 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 IS(0.734)T(0.262)Y(0.004)GLPAGGIQPHPQTK;IS(0.94)T(0.06)YGLPAGGIQPHPQTK 97.662 0.0022893 9434700 65918 98590 95066 106252 90362 74938 74508 64411 78895 87853 TRUE FALSE 70964.73276 93694.16396 98235.45299 97570.87172 86813.93385 77789.8181 64725.0101 72829.73886 85757.14449 84986.3638 0.835013167 1.102461145 1.155896647 1.14807679 1.021504274 0.915321172 0.761592886 0.856957935 1.009069463 1 16.37494376 -6.711535483 3.581467777 0.888456674 1.071103833 0.306900971 0.107003321 0.254962372 6.697825052 0.03884341 0.037376525 1.94E-07 6.711535483 0.18264716 IS(ph)WYLR ddPTM_A459_MK2206_30min_R1 1 ISWYLR 6 0 M0QYT0;M0R076;M0R248;M0QZW4;Q13011 M0QYT0;M0QZW4 ECH1 "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial" 1 IS(1)WYLR 110.31 0.025374 4065700 2709.2 2590.3 2691.5 2434.5 2154.2 2130.6 2631.5 2572.7 2194.6 2143.9 TRUE FALSE 2478.768313 2421.670999 2508.808479 2622.005612 2068.393652 2251.232731 2455.957436 2550.207155 2422.736523 2409.502518 1.028746928 1.005050205 1.041214301 1.088193763 0.858431829 0.93431433 1.01927988 1.058395721 1.005492422 1 11.23451959 ISAAASDSGVES(ph)FDEGSSH ddPTM_A459_MK2206_30min_R2 1 ISAAASDSGVESFDEGSSH 19 0 A0A2R8Y4W2;A0A2R8YE63;Q12929;Q12929-2 A0A2R8Y4W2 EPS8 Epidermal growth factor receptor kinase substrate 8 1 ISAAASDSGVES(1)FDEGSSH 211.57 4.79E-31 0 5491.1 6836.5 4969.2 6845.1 5538.6 5425.5 6514.8 6023.9 6156.5 4615.5 TRUE FALSE 5911.502838 6497.009351 5134.870648 6285.833434 5321.126735 5631.971204 5659.398934 6811.244413 6691.981242 4464.896613 1.323995458 1.455130973 1.15005365 1.407834039 1.191769305 1.26138894 1.267531911 1.525509996 1.498798701 1 12.12441105 ISAALNGHAQS(ph)PDIK ddPTM_A459_MK2206_30min_R2 3 ISAALNGHAQSPDIK 15 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 ISAALNGHAQS(1)PDIK;ISAALNGHAQS(1)PDIK;ISAALNGHAQS(1)PDIK 140.16 0.00038017 7300100 80705 82986 70985 91444 94814 66933 110727 70341 79164 96411 TRUE FALSE 86883.83685 78865.03591 73351.60447 83972.73269 91091.12596 69480.18222 96188.41189 79534.81022 86049.54162 93265.11697 0.931579134 0.845600568 0.786484882 0.900365918 0.976690202 0.744975018 1.031343926 0.85278197 0.922633718 1 16.50904996 -9.589689455 0.258219384 1.04410188 0.855615894 0.175850662 0.079528858 12.49093458 1.283923199 0.651697961 0.137542075 2.57E-10 9.589689455 -0.188485986 ISAPELLLHS(ph)PAR ddPTM_A459_MK2206_30min_R1 2 ISAPELLLHSPAR 13 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR 105.99 0.0058516 8908300 6733.7 6465.2 6483.2 5128 6102.1 5634 5851.5 5464.6 5654.9 4968.2 TRUE FALSE 6160.963455 6044.314305 6043.138447 5522.959449 5859.040436 5952.992211 5461.157112 5416.823578 6242.747091 5583.698124 1.103384051 1.082493031 1.082282443 0.989122142 1.049311819 1.066137903 0.97805379 0.970113974 1.118030909 1 12.44700523 -5.654716444 7.121243623 1.024107154 1.090134879 0.327318141 0.042797031 0.263158726 15.71565272 0.011605339 0.020182208 2.21E-06 5.654716444 0.066027725 ISAPELLLHS(ph)PAR ddPTM_A459_MK2206_30min_R2 2 ISAPELLLHSPAR 13 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR 149.19 0.00034796 12453500 51583 57389 46866 55606 56122 57082 55859 45081 47814 52532 TRUE FALSE 55532.23414 54539.14571 48428.48905 51062.81193 53918.36829 59254.29551 48524.6462 50973.24149 51972.77529 50817.88514 1.092769484 1.07322738 0.952981198 1.004819696 1.061011652 1.166012622 0.954873389 1.003057119 1.022726057 1 15.63304872 -8.350558103 0.007225141 1.62E-08 2.040766993 0.074087602 0.060137874 7782.467417 44.15548656 6275.872532 6191.024387 4.46E-09 8.350558103 2.040766977 ISDAELEAELEKLSLSEGGLVPSSK ddPTM_A459_MK2206_30min_R1 1 ISDAELEAELEKLSLSEGGLVPSSK 25 1 Q8WUX9 Q8WUX9 CHMP7 Charged multivesicular body protein 7 0 147.26 2.54E-09 2047400 737.52 883.87 813.35 1074 879.62 836.33 664.71 868.68 441.18 156.17 FALSE TRUE 674.7900511 826.3299023 758.1420681 1156.719666 844.5828728 883.6822819 620.3684087 861.0852223 487.0422398 175.5175186 3.844573786 4.707962537 4.31946665 6.590337393 4.811957686 5.034724105 3.534509909 4.905978783 2.774892464 1 7.455471225 -8.596715868 1.030006057 0.972153598 4.85966266 0.692337211 0.791711607 0.358964909 0.821846308 0.763264529 0.24948129 2.53E-09 8.596715868 3.887509062 ISDEDWDIIHR ddPTM_A459_MK2206_30min_R1 2 ISDEDWDIIHR 11 0 E7ER27;A0A2R8YD50;P51659-3;P51659;P51659-2;A0A2R8YDT8;A0A2R8YF45 E7ER27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 0 ; 168.3 4.58E-05 6064900 10116.1 9765.4 10827.5 8858.4 10974.8 9829.6 11403.4 10695.6 10196.4 10213.7 FALSE TRUE 9255.672573 9129.670685 10092.55947 9540.675503 10537.65048 10386.14346 10642.69999 10602.0895 11256.35227 11479.05027 0.806309961 0.795333279 0.879215548 0.831138054 0.917989749 0.904791182 0.927141161 0.923603369 0.980599615 1 13.48671566 -4.943087934 0.212282562 1.017164683 0.615523966 0.886153164 0.022107252 3.581089172 0.157725117 0.042206161 0.38424555 1.14E-05 4.943087934 -0.401640717 ISDEDWDIIHR ddPTM_A459_MK2206_30min_R2 4 ISDEDWDIIHR 11 0 E7ER27;A0A2R8YD50;P51659-3;P51659;P51659-2;A0A2R8YDT8;A0A2R8YF45 E7ER27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 0 ;;; 174.57 0.00017469 10352300 65861 78325 76242 79444 75789 81949 76604 72807 76396 72865 FALSE TRUE 70903.3688 74435.4944 78783.87023 72953.17107 72813.14305 85067.62662 66545.80278 82323.12488 83040.78599 70487.42102 1.005901021 1.056011035 1.117701131 1.03498142 1.032994852 1.206848334 0.944080544 1.167912284 1.178093691 1 16.1050782 -3.219533463 0.833639663 1.090210556 1.40E-09 0.079655468 0.080110521 72.55833054 4.686818688 0.027397964 127.2992624 0.000603207 3.219533463 -1.090210555 ISDS(ph)ESEDPPR ddPTM_A459_MK2206_30min_R1 1 ISDSESEDPPR 11 0 Q96ST2;Q96ST2-3;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 1 IS(0.436)DS(0.481)ES(0.083)EDPPR 121.29 0.0044846 10137000 3038.9 3052.4 3308 2607.9 2377.2 2372.8 3351.7 2544.2 4146.7 3995.2 TRUE FALSE 2780.425597 2853.688205 3083.462177 2808.76091 2282.51109 2507.145885 3128.114209 2521.956328 4577.764304 4490.155538 0.619227012 0.635543286 0.686716117 0.625537553 0.508336754 0.558365042 0.696660546 0.561663467 1.019511299 1 12.13254971 -8.265086584 24.99074192 1.009755721 0.612910284 0.894586509 0.054681267 99.12410781 679185.4839 0.048929676 0.014574901 5.43E-09 8.265086584 -0.396845437 ISDS(ph)ESEDPPR ddPTM_A459_MK2206_30min_R2 2 ISDSESEDPPR 11 0 Q96ST2;Q96ST2-3;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 1 IS(0.496)DS(0.498)ES(0.006)EDPPR;IS(0.369)DS(0.399)ES(0.232)EDPPR 174.57 5.71E-08 37477000 582860 510970 471630 484430 448230 387790 562050 554340 439480 585430 TRUE FALSE 627484.2097 485595.9728 487353.9088 444850.5194 430630.238 402547.6202 488252.1599 626794.1413 477705.176 566327.467 1.107988304 0.857447327 0.860551425 0.785500519 0.760390875 0.710803631 0.862137523 1.106769807 0.843514051 1 19.11127698 -10.2035035 7.9737209 0.999998387 0.871439082 0.077421005 0.12571301 9.40E-11 0 0.128679923 0.031209465 6.26E-11 10.2035035 -0.128559306 ISDYFEFAGGSAPGT(ph)SPGR ddPTM_A459_MK2206_30min_R2 1 ISDYFEFAGGSAPGTSPGR 19 0 Q86UE8-2;Q86UE8 Q86UE8-2 TLK2 Serine/threonine-protein kinase tousled-like 2 1 ISDYFEFAGGSAPGT(0.559)S(0.441)PGR 119.08 0.0010444 3286400 17940 25578 19973 28311 23979 24911 26350 19516 18779 21014 TRUE FALSE 19313.50019 24307.83371 20638.88985 25997.90074 23037.46398 25859.00556 22890.21335 22066.80821 20412.36348 20328.3149 0.950078759 1.195762356 1.015277949 1.278900925 1.133269732 1.272068329 1.12602611 1.085520778 1.004134557 1 14.31120301 -8.055240729 2.339885259 0.999482608 1.146497009 0.241025356 0.095929684 0.431468513 4.311518769 0.078286037 0.025646596 8.81E-09 8.055240729 0.147014401 ISDYFEFAGGSAPGTS(ph)PGR ddPTM_A459_MK2206_30min_R1 2 ISDYFEFAGGSAPGTSPGR 19 0 Q86UE8-2;Q86UE8 Q86UE8-2 TLK2 Serine/threonine-protein kinase tousled-like 2 1 ISDYFEFAGGS(0.003)APGT(0.301)S(0.696)PGR;ISDYFEFAGGS(0.001)APGT(0.196)S(0.804)PGR 166.77 6.32E-09 28118000 3512.6 3261.5 3443.7 2706.9 3694.4 3296.8 3852 3382.3 2522.45 2711.41 TRUE FALSE 3213.834925 3049.175757 3209.951239 2915.385907 3547.244225 3483.461967 3595.040108 3352.728908 2784.667704 3047.319941 1.054643092 1.000608999 1.053368632 0.956704896 1.164053757 1.143123149 1.17973832 1.100222153 0.913808776 1 11.57332526 -3.650206489 11.61970413 1.063797908 1.056027013 0 0.085635202 0 0 0.020517535 0 0.000223766 3.650206489 -0.007770894 ISDYFEFAGGSAPGTS(ph)PGR ddPTM_A459_MK2206_30min_R2 2 ISDYFEFAGGSAPGTSPGR 19 0 Q86UE8-2;Q86UE8 Q86UE8-2 TLK2 Serine/threonine-protein kinase tousled-like 2 1 ISDYFEFAGGS(0.01)APGT(0.233)S(0.757)PGR;ISDYFEFAGGS(0.003)APGT(0.212)S(0.786)PGR 145.79 4.92E-05 7745000 26709 39164 31689 37811 40862 42660 42665 32832 42645 34846 TRUE FALSE 28753.86158 37219.17271 32745.49544 34721.72035 39257.55256 44283.45619 37063.03425 37123.25513 46354.18502 33708.97787 0.853003069 1.104132343 0.971417631 1.030043702 1.164602282 1.313699168 1.099500388 1.101286882 1.375128762 1 15.04084526 -6.218356852 3.54167072 1.185283513 0.991133777 0.386284258 0.115660738 0.254466346 6.632352132 0.034667341 0.044360265 6.05E-07 6.218356852 -0.194149737 ISDYFEYQGGNGS(ph)SPVR ddPTM_A459_MK2206_30min_R2 3 ISDYFEYQGGNGSSPVR 17 0 B3KRP1;Q9UKI8;Q9UKI8-2;Q9UKI8-5;C9JWT6;Q9UKI8-4 B3KRP1 TLK1 Serine/threonine-protein kinase tousled-like 1 1 ISDYFEYQGGNGS(0.867)S(0.133)PVR;ISDYFEYQGGNGS(0.544)S(0.456)PVR;ISDYFEYQGGNGS(0.791)S(0.209)PVR 132.67 0.00068919 88634600 113214 127008 117109 127271 137936 142859 136580 109307 124882 119113 TRUE FALSE 121881.7509 120700.9674 121013.3556 116872.5522 132519.9396 148295.5994 118646.8819 123593.8002 135744.0106 115226.3526 1.057759342 1.04751183 1.050222913 1.014286659 1.15008361 1.286993783 1.029685305 1.072617483 1.178063938 1 16.81411118 -6.263964927 24.99535063 1.127081447 1.04336264 0.192602083 0.076432489 366.5283201 3627513.864 0.02375524 0.028250248 5.45E-07 6.263964927 -0.083718807 ISDYFEYQGGNGSS(ph)PVR ddPTM_A459_MK2206_30min_R1 3 ISDYFEYQGGNGSSPVR 17 0 B3KRP1;Q9UKI8;Q9UKI8-2;Q9UKI8-5;C9JWT6;Q9UKI8-4 B3KRP1 TLK1 Serine/threonine-protein kinase tousled-like 1 1 ISDYFEYQGGNGS(0.17)S(0.83)PVR;ISDYFEYQGGNGS(0.104)S(0.896)PVR;ISDYFEYQGGNGS(0.125)S(0.875)PVR 211.26 2.91E-09 159274000 10083.3 9540.8 10844.3 9553.9 10957.8 9853.9 10680.4 9808.2 9241.6 8330.8 TRUE FALSE 9225.662385 8919.692186 10108.21913 10289.74303 10521.32762 10411.8193 9967.930003 9722.447941 10202.29739 9362.882398 0.985344255 0.952665195 1.079605478 1.098993087 1.123727414 1.112031409 1.064621938 1.038403296 1.08965348 1 13.19273702 -5.267009526 24.5081706 1.080674485 0.969004721 0.594480771 0.035129787 200.9535297 884183.0248 0.009297326 0.020291595 5.41E-06 5.267009526 -0.111669764 ISDYFEYQGGNGSS(ph)PVR ddPTM_A459_MK2206_30min_R2 2 ISDYFEYQGGNGSSPVR 17 0 B3KRP1;Q9UKI8;Q9UKI8-2;Q9UKI8-5;C9JWT6;Q9UKI8-4 B3KRP1 TLK1 Serine/threonine-protein kinase tousled-like 1 1 ISDYFEYQGGNGS(0.033)S(0.967)PVR;ISDYFEYQGGNGS(0.193)S(0.807)PVR 227.09 3.28E-16 14321400 58072 67198 60038 71902 73970 69454 69755 50317 63338 63565 TRUE FALSE 62518.03697 63861.04504 62039.63695 66027.3766 71065.56613 72097.12064 60596.08471 56893.60466 68847.02475 61490.87926 1.016704229 1.038544997 1.008924213 1.073775126 1.155709058 1.17248479 0.985448337 0.92523648 1.119629864 1 15.90808482 ISEGLPT(ph)PTK ddPTM_A459_MK2206_30min_R1 1 ISEGLPTPTK 10 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 ISEGLPT(0.996)PT(0.004)K 120.03 0.012195 36814000 5339.1 5299.1 5321.7 4045.7 4315.9 4290.1 5720.9 4459.8 5558.6 6052.9 TRUE FALSE 4884.981508 4954.127627 4960.477831 4357.300515 4143.988564 4533.001755 5339.269199 4420.808439 6136.436362 6802.778949 0.718086174 0.728250567 0.729184039 0.640517728 0.609161138 0.66634559 0.784865897 0.649853313 0.902048473 1 12.7319085 -8.413886368 3.520497247 0.997717371 0.691225763 0.818369943 0.049900414 0.093404995 2.050918083 0.051092475 0.013558313 3.86E-09 8.413886368 -0.306491608 ISEGLPT(ph)PTK ddPTM_A459_MK2206_30min_R2 1 ISEGLPTPTK 10 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 ISEGLPT(0.709)PT(0.291)K 116.71 0.014615 37008000 327060 324120 286510 277610 272290 233240 355240 262270 244990 335820 TRUE FALSE 352099.9651 308024.6721 296062.1004 254928.375 261598.5265 242116.1116 308596.5613 296549.5895 266298.7874 324862.2209 1.083843988 0.948170185 0.911346661 0.784727674 0.805259921 0.745288606 0.94993059 0.912847264 0.819728396 1 18.30946845 -4.855412732 1.614747006 0.854476725 1.14304073 0.446134766 0.074940304 0.796905419 2.268195791 0.021606074 0.349322588 1.40E-05 4.855412732 0.288564005 ISEGLPTPTKMT(ph)PR ddPTM_A459_MK2206_30min_R1 1 ISEGLPTPTKMTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 ISEGLPTPT(0.049)KMT(0.95)PR 119.04 0.0031424 47282000 4774 4047.1 4833.5 4268.6 5152.3 4118.7 4655.8 4675.3 3849.3 2655.1 TRUE FALSE 4367.946231 3783.633054 4505.415487 4597.368312 4947.072981 4351.897235 4345.220077 4634.424345 4249.44851 2984.033833 1.463772355 1.267959167 1.509840618 1.540655559 1.657847484 1.458394066 1.456156438 1.553073659 1.424061773 1 11.54304818 -10.40218577 9.1150817 1 1.483506187 0.696208203 0.095371003 0 1.61E-10 0.098420336 0.023870437 3.96E-11 10.40218577 0.483506187 ISEGLPTPTKMT(ph)PR ddPTM_A459_MK2206_30min_R2 1 ISEGLPTPTKMTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 ISEGLPT(0.001)PT(0.023)KMT(0.976)PR 100.69 0.012204 35201000 88023 153960 123560 138440 152340 161010 139090 111120 146040 111060 TRUE FALSE 94762.10856 146314.5703 127679.4287 127129.0092 146358.3662 167137.3484 120827.3159 125643.7655 158742.2952 107436.1213 0.882032108 1.361875024 1.188421801 1.183298574 1.36228267 1.555690455 1.124643318 1.16947414 1.477550504 1 16.7131196 -4.753749978 24.77802081 1.276672517 0.882031313 0.340460111 0.161384797 285.1290564 918704.0217 0.039338485 0.40854812 1.76E-05 4.753749978 -0.394641204 ISELDSMMSESDNSKS(ph)PCNNGFK ddPTM_A459_MK2206_30min_R2 1 ISELDSMMSESDNSKSPCNNGFK 23 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 ISELDS(0.013)MMS(0.012)ES(0.055)DNS(0.183)KS(0.737)PCNNGFK 48.968 0.029709 4124100 7566.9 9073.9 6665.2 8325.4 9589.8 8353.1 9758.3 8424.1 8620.4 10377 TRUE FALSE 8146.227682 8623.303321 6887.414441 7645.188188 9213.256267 8670.983074 8477.023488 9525.158794 9370.18681 10038.39934 0.811506636 0.859031707 0.686106839 0.761594347 0.91780133 0.863781444 0.844459679 0.948872273 0.933434355 1 13.29324162 -7.494810866 0.555383176 0.9947843 0.78157717 0.605023031 0.055750821 0.623998367 0.405047492 0.05737096 0.04006326 3.20E-08 7.494810866 -0.21320713 ISELTGTPFDVES(ph)DS(ph)FCLRNIMEAPLLK ddPTM_A459_MK2206_30min_R2 1 ISELTGTPFDVESDSFCLRNIMEAPLLK 28 1 H0Y7V4;A0A075B6F3;Q96JB1-2;Q96JB1 H0Y7V4 DNAH8 "Dynein heavy chain 8, axonemal" 2 IS(0.092)ELT(0.092)GT(0.091)PFDVES(0.863)DS(0.863)FCLRNIMEAPLLK 43.162 0.021353 7539100 22525 19715 17089 27527 25784 13989 26738 18576 18313 24509 TRUE FALSE 24249.53132 18735.98177 17658.73873 25277.95605 24771.59061 14521.3612 23227.26848 21003.94698 19905.83164 23709.27334 1.022786779 0.790238549 0.744803035 1.066163255 1.044805982 0.612476013 0.979670197 0.885895855 0.839579997 1 14.53316383 -10.67354649 4.893880272 1.000008034 0.884803291 0.056036916 0.138304924 1.21E-05 2.09E-06 0.133341578 0.032337828 2.12E-11 10.67354649 -0.115204743 ISES(ph)PEPGQR ddPTM_A459_MK2206_30min_R1 1 ISESPEPGQR 10 0 O14867;H7C4B6 O14867 BACH1 Transcription regulator protein BACH1 1 IS(0.154)ES(0.846)PEPGQR 89.9 0.034155 0 3246 3178.8 3569.6 2860.5 3195 2940.6 3630.7 3120.5 2797.8 2671.4 TRUE FALSE 2969.910655 2971.859542 3327.305497 3080.816206 3067.736384 3107.094231 3388.502628 3093.217797 3088.641322 3002.3532 0.989194294 0.989843414 1.108232535 1.026133836 1.021777313 1.034886312 1.12861559 1.03026446 1.028740164 1 11.55187799 -5.117140128 17.81213754 1.049200829 0.989356739 0.268702728 0.038050572 2.8314558 416.011281 0.009645967 0.025522134 7.64E-06 5.117140128 -0.05984409 ISES(ph)PEPGQR ddPTM_A459_MK2206_30min_R2 2 ISESPEPGQR 10 0 O14867;H7C4B6 O14867 BACH1 Transcription regulator protein BACH1 1 IS(0.006)ES(0.994)PEPGQR;ISES(1)PEPGQR 99.343 0.018595 21676000 69129 82015 76529 91094 85898 87783 83575 73251 80363 85562 TRUE FALSE 74421.56939 77942.25436 79080.43866 83651.3288 82525.21292 91123.64358 72601.50211 82825.15721 87352.82848 82770.11895 0.899135707 0.941671407 0.955422557 1.010646473 0.99704113 1.1009244 0.877146282 1.000664953 1.055366714 1 16.33682241 -5.313786325 1.492997005 1.004473451 0.902790776 0.300543021 0.053816092 0.703833253 2.617604799 0.01647544 0.078219398 4.86E-06 5.313786325 -0.101682675 ISFPGSSES(ph)PLSSK ddPTM_A459_MK2206_30min_R1 1 ISFPGSSESPLSSK 14 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 ISFPGS(0.006)S(0.13)ES(0.863)PLS(0.001)SK 212.39 2.83E-06 15467000 3465.6 3496.1 4118.8 2529.3 3526.4 2811.9 3434.2 3448.1 2874.9 3065.6 TRUE FALSE 3170.832521 3268.503255 3839.227332 2724.107124 3385.936021 2971.107348 3205.110784 3417.953625 3173.756143 3445.389672 0.920311728 0.948659968 1.114308597 0.790652839 0.982743998 0.862342908 0.930260751 0.992036881 0.921160288 1 11.75045145 -10.87563388 3.556650199 1.000292207 0.9414247 0.04747181 0.080110667 18415328.31 18770421.42 35894.17329 0.018716058 1.33E-11 10.87563388 -0.058867507 ISFPGSSES(ph)PLSSK ddPTM_A459_MK2206_30min_R2 2 ISFPGSSESPLSSK 14 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 ISFPGSS(0.001)ES(0.998)PLS(0.001)SK;ISFPGS(0.002)S(0.046)ES(0.95)PLS(0.002)S(0.001)K 207.08 7.07E-06 9099600 89615 104787 85590 107604 91890 94914 106964 85126 86727 96635 TRUE FALSE 96475.9933 99583.42995 88443.52788 98812.40899 88281.93689 98526.01878 92919.49831 96252.26048 94270.35769 93481.80786 1.032029606 1.06527069 0.946104166 1.057022872 0.944375584 1.053959279 0.993984824 1.029636276 1.008435329 1 16.51239801 ISFPPSCPDAVVATPPGAS(ph)PPVKDR ddPTM_A459_MK2206_30min_R1 2 ISFPPSCPDAVVATPPGASPPVKDR 25 1 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 ISFPPSCPDAVVATPPGAS(1)PPVKDR;ISFPPSCPDAVVAT(0.001)PPGAS(0.999)PPVKDR 167.92 2.48E-16 78489000 8825.8 8737.1 8861.6 8229.6 8321.2 6878.5 8381.2 9077.2 7863.1 6722.8 TRUE FALSE 8075.119364 8168.313202 8260.099282 8863.445218 7989.748984 7267.954726 7822.10544 8997.838997 8680.497383 7555.671219 1.068749437 1.081083727 1.093231699 1.173085086 1.057450589 0.961920459 1.035262813 1.190872225 1.148871772 1 12.88334421 -11.01039222 2.986915605 0.997382616 1.088955589 0.14921732 0.06446446 13463183.25 14783830.62 287292.7035 0.017444096 9.76E-12 11.01039222 0.091572973 ISFPPSCPDAVVATPPGAS(ph)PPVKDR ddPTM_A459_MK2206_30min_R2 2 ISFPPSCPDAVVATPPGASPPVKDR 25 1 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 ISFPPSCPDAVVATPPGAS(1)PPVKDR;ISFPPSCPDAVVAT(0.007)PPGAS(0.993)PPVKDR 121.76 4.24E-08 37671000 139914 185280 161977 196618 184154 158106 186200 143592 156105 169095 TRUE FALSE 150625.9234 176079.2646 167377.2323 180553.6805 176923.1887 164122.8346 161751.7163 162359.9674 169682.7307 163577.444 0.92082331 1.076427534 1.023229293 1.103781035 1.081586705 1.003334143 0.988838757 0.992557185 1.037323524 1 17.3196143 -6.835671329 14.8530647 1.002952878 1.04560748 0.123511423 0.048164173 2.86985892 570.3867204 0.016994194 0.014987978 1.46E-07 6.835671329 0.042654601 ISGLIYEETR ddPTM_A459_MK2206_30min_R1 3 ISGLIYEETR 10 0 P62805 P62805 HIST1H4A Histone H4 0 ;; 151.83 0.0091011 37681200 8337.1 6778.4 7163.2 7946.6 6718.8 8058.8 7392 8302.6 6348.6 10919.8 FALSE TRUE 7627.985865 6337.124928 6676.981942 8558.648509 6451.175969 8515.082292 6898.893167 8230.011244 7008.559689 12272.62726 0.621544654 0.516362535 0.544054814 0.697377043 0.525655659 0.693827174 0.562136617 0.670598973 0.57107248 1 13.58315651 -14.52287875 0.32120835 4.807538273 0.584206061 0.773884375 0.06475506 141.8102434 1.252917419 367.2091974 0.054174889 3.00E-15 14.52287875 -4.223332212 ISHEGS(ph)PVKPVAIR ddPTM_A459_MK2206_30min_R1 1 ISHEGSPVKPVAIR 14 1 Q96II8-3;Q96II8;Q96II8-2 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 IS(0.003)HEGS(0.997)PVKPVAIR 71.316 0.030298 9943100 1609.2 3017.4 2563.2 2752.7 1799.9 1642.4 2247.7 2303.8 2688.3 2428.3 TRUE FALSE 1472.32909 2820.966712 2389.217125 2964.713431 1728.206172 1735.391269 2097.760034 2283.658119 2967.758405 2729.136137 0.539485396 1.033648221 0.875448129 1.086319364 0.633242933 0.63587567 0.768653497 0.836769588 1.087435092 1 11.41422865 -8.199683401 5.526656146 1.043171651 0.807349781 0.257919368 0.164609644 0.292617563 18.11734002 0.122356898 0.043558533 6.31E-09 8.199683401 -0.23582187 ISHSLYSGIEGLDES(ph)PSR ddPTM_A459_MK2206_30min_R1 6 ISHSLYSGIEGLDESPSR 18 0 F5GZI3;B1AP52;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 ISHSLYSGIEGLDES(0.99)PS(0.01)R;ISHSLYS(0.001)GIEGLDES(0.977)PS(0.023)R;ISHSLYSGIEGLDES(0.891)PS(0.109)R;ISHSLYSGIEGLDES(0.895)PS(0.105)R;ISHSLYSGIEGLDES(0.893)PS(0.107)R;ISHSLYSGIEGLDES(0.7)PS(0.3)R 264.09 3.40E-43 80666800 10211.26 7421.09 8080.29 6430.62 11022.53 10216.36 10122.01 8914.2 7077.41 6355.25 TRUE FALSE 9342.738716 6937.975692 7531.822428 6925.907467 10583.47929 10794.80147 9446.789182 8836.264089 7813.132096 7142.58635 1.308033009 0.971353422 1.054495117 0.969663806 1.481743275 1.511329502 1.322600627 1.237123873 1.093879964 1 12.80223086 -6.2483614 24.9797987 1.300554292 1.066891756 0.23620802 0.170791078 1025.0717 1957953.359 0.051792218 0.06645524 5.64E-07 6.2483614 -0.233662536 ISHSLYSGIEGLDES(ph)PSR ddPTM_A459_MK2206_30min_R2 4 ISHSLYSGIEGLDESPSR 18 0 F5GZI3;B1AP52;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 ISHSLYSGIEGLDES(0.886)PS(0.114)R;ISHSLYSGIEGLDES(0.896)PS(0.104)R;ISHSLYSGIEGLDES(0.993)PS(0.007)R;ISHSLYSGIEGLDES(0.764)PS(0.236)R 271.42 2.88E-54 48675100 63300.7 82854.2 62616.2 104167.1 110398.3 93929.8 94175.2 70347.8 86789.6 81075.7 TRUE FALSE 68147.05026 78739.78091 64703.79286 95656.31472 106063.508 97504.36436 81809.88312 79542.499 94338.40253 78430.20655 0.868887808 1.003947132 0.824985624 1.219636144 1.352329832 1.243199128 1.043091517 1.01418194 1.202832514 1 16.25912178 -5.76514027 24.99999203 1.161609 0.909740867 0.513970234 0.11301497 81.42631324 550050.6951 0.034106299 0.052889772 1.72E-06 5.76514027 -0.251868133 ISHTPQTPLYT(ph)PER ddPTM_A459_MK2206_30min_R2 1 ISHTPQTPLYTPER 14 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 ISHTPQT(0.006)PLYT(0.994)PER 142.4 0.00074079 4763500 18197 17620 18527 15145 17823 15333 19337 13418 17227 17853 TRUE FALSE 19590.17631 16745.01642 19144.68093 13907.60505 17123.17947 15916.50806 16798.02867 15171.77867 18725.37332 17270.45807 1.134317123 0.969575697 1.108521896 0.805282929 0.991472224 0.921603121 0.97264523 0.878481544 1.084243003 1 14.07601873 -1.977025255 0.913900239 0.955095141 37.87283292 0.247969598 0.084833569 497.1626644 2.641086812 0.026383187 37906.56252 0.010543256 1.977025255 36.91773778 ISINQT(ph)PGK ddPTM_A459_MK2206_30min_R1 2 ISINQTPGK 9 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;H0YDG6;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 IS(0.01)INQT(0.99)PGK;IS(0.001)INQT(0.999)PGK 137.01 0.0060587 72071000 13463.8 15288.1 15414.3 13625.6 11604.8 9575.7 11695.7 11503.2 12063.7 10603 TRUE FALSE 12318.63311 14292.84191 14368.02026 14675.04607 11142.55624 10117.86786 10915.50119 11402.62874 13317.76479 11916.57969 1.033738995 1.199408076 1.205716794 1.231481386 0.935046509 0.849058045 0.9159928 0.956870934 1.117582824 1 13.54068259 -6.268150964 24.77475468 0.952278747 1.172582904 0.601479747 0.081520607 319.522667 1179465.21 0.026288526 0.030482027 5.39E-07 6.268150964 0.220304157 ISINQT(ph)PGK ddPTM_A459_MK2206_30min_R2 3 ISINQTPGK 9 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;H0YDG6;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 ISINQT(1)PGK;IS(0.103)INQT(0.897)PGK;IS(0.029)INQT(0.971)PGK 136.53 0.006155 100348000 486090 465127 497470 483340 471456 333962 580380 400302 379184 522720 TRUE FALSE 523305.4241 442029.4695 514055.4015 443849.5759 452944.2686 346671.1579 504175.4088 452622.8458 412164.7389 505663.6892 1.034888277 0.874157032 1.016595442 0.877756472 0.895742127 0.685576531 0.997056778 0.895106482 0.815096571 1 18.94781866 -1.522895231 0.643603551 0.878308299 12.6873499 0.153144632 0.094186837 401.1219557 2.652682164 0.039323373 6739.054679 0.029998861 1.522895231 11.8090416 ISIVRPFS(ph)IETK ddPTM_A459_MK2206_30min_R2 1 ISIVRPFSIETK 12 1 E5RFM9;R4GMT7;O75410-7;O75410-9;O75410;O75410-2 E5RFM9 TACC1 Transforming acidic coiled-coil-containing protein 1 1 ISIVRPFS(0.986)IET(0.014)K 72.446 0.031462 4989700 9629.5 13435 14418 11541 14249 13148 17813 11196 15797 16659 TRUE FALSE 10366.74192 12767.83744 14898.68892 10598.06338 13689.51266 13648.35635 15474.1317 12659.35564 17170.99451 16115.41819 0.643280975 0.792274658 0.924499057 0.657635021 0.849466796 0.846912949 0.960206649 0.785543105 1.065501019 1 13.97615401 -5.078077822 0.170092298 1.062121366 0.445928774 0.481160045 0.09496182 16.4694063 0.55756404 0.336369043 2.26357053 8.35E-06 5.078077822 -0.616192592 ISKPGAVST(ph)PVK ddPTM_A459_MK2206_30min_R2 2 ISKPGAVSTPVK 12 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ISKPGAVS(0.133)T(0.867)PVK;ISKPGAVS(0.098)T(0.902)PVK 134.04 0.01716 245737000 380151 285745 282394 312319 297281 243972 383570 268328 216911 374702 TRUE FALSE 409255.6528 271555.3188 291808.875 286801.5386 285608.2542 253256.5254 333206.7982 303399.3909 235777.5267 362475.5044 1.129057406 0.749168745 0.8050444 0.791230125 0.787938083 0.698685904 0.919253285 0.837020398 0.650464718 1 18.46752398 -4.756200056 24.9935643 0.798612153 1.129057923 0.50927752 0.095485046 127.8405505 609781.0301 0.022277299 0.18458804 1.75E-05 4.756200056 0.33044577 ISLEQPPNGS(ph)DTPNPEK ddPTM_A459_MK2206_30min_R1 5 ISLEQPPNGSDTPNPEK 17 0 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 ISLEQPPNGS(0.992)DT(0.008)PNPEK;ISLEQPPNGS(0.562)DT(0.438)PNPEK;ISLEQPPNGS(0.997)DT(0.003)PNPEK;ISLEQPPNGS(0.935)DT(0.065)PNPEK;ISLEQPPNGS(0.784)DT(0.216)PNPEK 225.86 2.71E-51 16901400 12942.9 12998.5 11840.6 9480.9 11143.8 9755.2 12932.4 10503.9 13101.9 13457.4 TRUE FALSE 11842.03839 12152.29529 11036.89306 10211.12056 10699.91885 10307.53099 12069.70319 10412.06551 14463.88939 15124.60431 0.78296517 0.80347856 0.729731029 0.675133071 0.707451159 0.681507482 0.798017782 0.688419035 0.956315226 1 13.88460978 -8.329048707 5.127338469 0.991471437 0.733220938 0.820520597 0.045862735 0.091802245 4.536544528 0.045801082 0.012134737 4.69E-09 8.329048707 -0.258250499 ISLEQPPNGS(ph)DTPNPEK ddPTM_A459_MK2206_30min_R2 7 ISLEQPPNGSDTPNPEK 17 0 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 ISLEQPPNGS(0.873)DT(0.127)PNPEK;ISLEQPPNGS(0.997)DT(0.003)PNPEK;ISLEQPPNGS(0.951)DT(0.049)PNPEK;ISLEQPPNGS(0.882)DT(0.118)PNPEK;ISLEQPPNGS(0.99)DT(0.01)PNPEK;ISLEQPPNGS(0.755)DT(0.245)PNPEK;ISLEQPPNGS(0.606)DT(0.394)PNPEK 241.11 2.46E-65 33319800 274694 244408 245038 248089 230099 213787 272657 198140 178695 273570 TRUE FALSE 295724.7838 232271.0541 253207.4446 227819.3351 221064.1571 221922.8141 236856.8084 224037.5783 194237.5681 264643.4333 1.117446143 0.877675487 0.956787181 0.860853913 0.83532833 0.83857291 0.895003535 0.846563905 0.733959523 1 18.01369033 -1.532850687 0.970784724 0.855939921 199.9999999 0.52482026 0.069208806 987.2617341 1.600452876 0.021483013 436864.73 0.029319011 1.532850687 199.1440599 ISLPGQMAGT(ph)PITPLK ddPTM_A459_MK2206_30min_R2 1 ISLPGQMAGTPITPLK 16 0 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 ISLPGQMAGT(0.93)PIT(0.07)PLK 207.92 1.57E-07 2476600 72883 35164 44937 32478 32837 27250 47800 32793 23830 58040 TRUE FALSE 78462.97852 33417.80689 46435.17715 29824.44351 31547.65439 28287.01784 41523.80258 37079.1577 25902.69033 56146.15955 1.397477212 0.595193102 0.827041022 0.531192939 0.561884457 0.503810378 0.739566213 0.660404166 0.461343938 1 15.77689972 -4.759403644 24.99230661 0.639537707 1.397478181 0.669228004 0.156665798 29.61612983 363499.1376 0.036666057 0.233685561 1.74E-05 4.759403644 0.757940474 ISLPGQMAGTPIT(ph)PLK ddPTM_A459_MK2206_30min_R2 1 ISLPGQMAGTPITPLK 16 0 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 ISLPGQMAGTPIT(1)PLK 110.26 0.0066107 3379200 52251 20507 28132 17216 20971 15997 32170 17973 13762 35305 TRUE FALSE 56251.37673 19488.6522 29069.90684 15809.39773 20147.57317 16605.77704 27946.04036 20322.13281 14958.99388 34153.00074 1.647040539 0.570627815 0.85116699 0.46289923 0.589921024 0.486217219 0.818260175 0.595032131 0.437999401 1 15.05972472 -4.759317972 24.99988047 0.632495848 1.647041837 0.742458121 0.176753499 26.18482162 308502.021 0.041327777 0.264949621 1.74E-05 4.759317972 1.014545988 ISLPLPNFS(ph)SLNLR ddPTM_A459_MK2206_30min_R2 1 ISLPLPNFSSLNLR 14 0 P08670;B0YJC4 P08670 VIM Vimentin 1 ISLPLPNFS(0.902)S(0.098)LNLR 179.97 7.32E-05 108460000 274440 263560 216740 264800 237900 227050 289780 179980 206270 205640 TRUE FALSE 295451.3374 250471.9937 223966.0034 243164.9929 228558.8506 235690.5469 251731.5379 203504.004 224210.9917 198929.9836 1.485202643 1.259096236 1.125853425 1.222364716 1.148941183 1.184791466 1.265427832 1.022993117 1.127084955 1 17.60190122 -1.522880753 0.893092417 1.138615582 168.0399069 0.659856649 0.076509195 537.4988063 1.216208525 0.025500268 182776.855 0.029999861 1.522880753 166.9012913 ISLPLPNFSS(ph)LNLR ddPTM_A459_MK2206_30min_R2 1 ISLPLPNFSSLNLR 14 0 P08670;B0YJC4 P08670 VIM Vimentin 1 ISLPLPNFS(0.347)S(0.653)LNLR 87.363 0.022155 119570000 386190 292720 283330 269860 298260 318040 296710 193000 252850 297130 TRUE FALSE 415757.0033 278183.9505 292776.0808 247811.5748 286548.8138 330143.2351 257751.6206 218225.7627 274842.436 287434.6724 1.446439985 0.967816263 1.018583034 0.862149207 0.996918052 1.148585285 0.896731137 0.759218645 0.956190962 1 18.13287457 -4.760344384 5.940697039 0.951958064 1.46570304 0.693271019 0.097835817 0.08311225 11.00920613 0.026101164 0.174046475 1.74E-05 4.760344384 0.513744975 ISLSKS(ph)PTKTDPK ddPTM_A459_MK2206_30min_R1 1 ISLSKSPTKTDPK 13 2 A0A0A0MRN4;Q5BKZ1-3;Q5BKZ1 A0A0A0MRN4 ZNF326 DBIRD complex subunit ZNF326 1 IS(0.001)LS(0.125)KS(0.854)PT(0.018)KT(0.002)DPK 119.45 0.043977 0 2041.3 2578.2 2412.2 2432.8 1799.4 1327.8 1556.8 2148.8 1784.8 1041.5 TRUE FALSE 1867.676716 2410.358711 2248.466585 2620.174678 1727.726088 1402.978889 1452.948713 2130.013268 1970.336347 1170.528883 1.595583623 2.059204815 1.920897995 2.238453673 1.476021748 1.198585451 1.241275404 1.819701589 1.683287252 1 10.19294482 -6.36268736 7.014526051 1.42174225 1.957469216 0.505891507 0.266413697 0.233372403 14.04610187 0.085471228 0.096950789 4.34E-07 6.36268736 0.535726966 ISMPDIDLNLT(ph)GPK ddPTM_A459_MK2206_30min_R1 2 ISMPDIDLNLTGPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ISMPDIDLNLT(1)GPK;ISMPDIDLNLT(1)GPK 207.4 1.59E-05 18582000 11222.4 11704.9 10172.2 10626 8134.9 6871.6 8703 8874.5 9219.5 9117.4 TRUE FALSE 10267.87595 10942.90888 9481.739405 11444.41636 7810.869707 7260.664054 8122.43875 8796.911182 10177.90002 10246.93234 1.00204389 1.067920477 0.925324681 1.116862684 0.762264202 0.708569532 0.792670282 0.85849217 0.993263123 1 13.32290445 -6.265200353 24.99987267 0.835275494 1.023550026 0.427152988 0.098295606 306.0853961 2034601.989 0.030789923 0.036240546 5.43E-07 6.265200353 0.188274532 ISMPDLDLHLKS(ph)PK ddPTM_A459_MK2206_30min_R1 2 ISMPDLDLHLKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK 85.973 0.010242 154010000 54072 60310 52677 46973 27414 22930 26824 30649 32075 28939 TRUE FALSE 49472.89246 56383.80804 49101.43201 50590.8686 26322.04233 24228.27678 25034.6199 30381.03902 35409.31103 32524.1818 1.521111054 1.733596509 1.50969 1.555484744 0.809306826 0.74493117 0.76972328 0.934106174 1.088707204 1 14.98922514 -6.256470869 23.62932993 0.874454209 1.58592392 0.897423805 0.113999772 59.01761242 280675.9449 0.036199606 0.04519304 5.54E-07 6.256470869 0.711469711 ISMPDLDLHLKS(ph)PK ddPTM_A459_MK2206_30min_R2 2 ISMPDLDLHLKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK 66.538 0.029485 49637000 160573 138772 127684 89733 106195 58884 101202 66966 70338 92748 TRUE FALSE 172866.5923 131880.7843 131940.9208 82401.52686 102025.2507 61124.87188 87914.05583 75718.68613 76455.8721 89721.64036 1.926698973 1.469888243 1.4705585 0.918413067 1.137130912 0.68127234 0.979853416 0.84392891 0.852145277 1 16.45316838 -5.105540308 0.788422075 0.868352928 2.204961935 0.853932167 0.138373946 0.583656769 0.380239685 0.052659324 0.630717178 7.84E-06 5.105540308 1.336609007 ISMPDVDLHLK ddPTM_A459_MK2206_30min_R2 2 ISMPDVDLHLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 143.24 0.0012023 4681400 40758 42715 47703 50005 46794 44217 52221 38812 43284 48116 FALSE TRUE 43878.46382 40593.83521 49293.39421 45919.43154 44956.63244 45899.70892 45364.31997 43884.86166 47048.76408 46545.97886 0.942690752 0.872123354 1.059025837 0.986539174 0.96585427 0.986115451 0.974613083 0.942828204 1.010801905 1 15.50636892 -5.244010586 24.99998616 0.986903002 0.907407053 0.500406759 0.033123569 687.6962839 986432.9534 0.008285777 0.021815157 5.70E-06 5.244010586 -0.079495949 ISMQDVDLSLGS(ph)PK ddPTM_A459_MK2206_30min_R1 3 ISMQDVDLSLGSPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ISMQDVDLSLGS(1)PK;ISMQDVDLS(0.013)LGS(0.987)PK;ISMQDVDLSLGS(1)PK 122.16 0.0068858 54331100 15094 18803.9 17519.9 14863.8 10285.9 8390.9 9588.3 11254.4 12850.1 11793.4 TRUE FALSE 13810.17604 17579.76269 16330.698 16008.61245 9876.190822 8865.985507 8948.682002 11156.00397 14185.91388 13254.45543 1.04192708 1.326328553 1.232091208 1.207791036 0.745122338 0.668906056 0.675145203 0.841679542 1.07027512 1 13.69418978 -6.25524707 24.43213369 0.809455775 1.213059565 0.629112333 0.137771809 230.9193791 911105.0103 0.04261711 0.053579152 5.56E-07 6.25524707 0.40360379 ISMQDVDLSLGS(ph)PK ddPTM_A459_MK2206_30min_R2 3 ISMQDVDLSLGSPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLS(0.036)LGS(0.964)PK 156.17 0.00032289 34423000 212285 176771 191015 141910 164931 111281 176036 126713 136028 185981 TRUE FALSE 228537.7028 167992.8092 197383.3448 130315.4991 158454.9802 115515.8764 152922.2617 143274.8242 147859.4696 179912.4552 1.270271714 0.933747522 1.097107727 0.724327279 0.880733799 0.642067145 0.849981518 0.796358562 0.821841208 1 17.45693554 -4.166368218 0.764748736 0.807384503 2.051209761 0.554033253 0.116470308 4.276076502 0.977103894 0.041861831 5.664308975 6.82E-05 4.166368218 1.243825259 ISMS(ph)EVDLNVAAPK ddPTM_A459_MK2206_30min_R2 1 ISMSEVDLNVAAPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(0.162)MS(0.838)EVDLNVAAPK 150.05 0.0016252 8765100 49561 54696 50112 48057 52773 47567 58827 39393 45002 42573 TRUE FALSE 53355.42827 51979.87618 51782.70907 44130.58937 50700.86686 49377.19552 51102.94424 44541.80036 48916.19262 41183.8465 1.295542617 1.262142335 1.257354848 1.071550939 1.231086243 1.198945696 1.240849231 1.081535703 1.187751917 1 15.32979096 -14.52287867 0.059058138 0.255362819 1.519761009 0.561921045 0.06159265 322.1057533 1.386098827 34.92149841 5.955830115 3.00E-15 14.52287867 1.264398189 ISNLS(ph)PEEEQGLWK ddPTM_A459_MK2206_30min_R1 3 ISNLSPEEEQGLWK 14 0 F5GX09;Q5HYJ3-3;Q5HYJ3-2;Q5HYJ3 F5GX09 FAM76B Protein FAM76B 1 ISNLS(1)PEEEQGLWK;IS(0.424)NLS(0.576)PEEEQGLWK;ISNLS(1)PEEEQGLWK 178.99 6.93E-05 132362200 21447.6 22299.3 22622.8 21007.3 22808.5 18821.3 19705.5 22037.6 16290.1 13617.8 TRUE FALSE 19623.36899 20847.61152 21087.22737 22625.28589 21899.98915 19886.94574 18390.98205 21844.92759 17983.51419 15304.87587 1.282164531 1.36215489 1.377811068 1.478305742 1.430915829 1.299386281 1.201642026 1.427318181 1.175018624 1 13.90170372 -8.880834537 0.608638814 0.989844445 1.378479722 0.655087703 0.081070213 0.89291579 0.64132237 0.099432315 0.036090434 1.32E-09 8.880834537 0.388635278 ISNLS(ph)PEEEQGLWK ddPTM_A459_MK2206_30min_R2 4 ISNLSPEEEQGLWK 14 0 F5GX09;Q5HYJ3-3;Q5HYJ3-2;Q5HYJ3 F5GX09 FAM76B Protein FAM76B 1 ISNLS(1)PEEEQGLWK;IS(0.048)NLS(0.952)PEEEQGLWK;ISNLS(1)PEEEQGLWK;ISNLS(1)PEEEQGLWK 213.02 2.33E-06 50020300 180639 236841 219528 237037 248334 210306 247005 190181 193495 215794 TRUE FALSE 194468.8607 225079.8203 226846.954 217670.3189 238583.1594 218309.3422 214572.9468 215038.3097 210324.8453 208752.6595 0.931575489 1.078212948 1.086678151 1.042718782 1.142898778 1.045779933 1.027881261 1.030110516 1.007531333 1 17.67143505 -10.1934056 6.764213958 0.999999941 1.048071822 0.053537824 0.052316527 3.72E-11 0 0.050836183 0.012329585 6.41E-11 10.1934056 0.04807188 ISNYGWDQSDK ddPTM_A459_MK2206_30min_R2 2 ISNYGWDQSDK 11 0 Q9HB71;Q9HB71-3 Q9HB71 CACYBP Calcyclin-binding protein 0 ; 186.46 0.0002653 6864300 22154 20351.8 27181 22553 20052.1 15361.5 23253.7 26489 19235.7 24068.9 FALSE TRUE 23850.12727 19341.15921 28087.20097 20710.34776 19264.7538 15946.09265 20200.46126 29951.20325 20908.78642 23283.53376 1.024334515 0.830679716 1.206311776 0.889484731 0.827398195 0.684865657 0.867585714 1.28636845 0.898007434 1 14.50702241 -9.808097427 7.722288637 1.000005683 0.945229494 0.008699831 0.172324839 0 0 0.174025441 0.042207369 1.56E-10 9.808097427 -0.054776189 ISPS(ph)SLSNNYNNMNNR ddPTM_A459_MK2206_30min_R2 1 ISPSSLSNNYNNMNNR 16 0 Q9Y4E8 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 IS(0.047)PS(0.952)SLSNNYNNMNNR 204.67 2.15E-07 8523600 14902 17707 16033 16884 16374 16485 20511 14334 13990 16777 TRUE FALSE 16042.90858 16827.69613 16567.53222 15504.52319 15731.07449 17112.34823 17817.88106 16207.50302 15206.82491 16229.56786 0.988498814 1.036854232 1.02082399 0.955325694 0.969284864 1.054393338 1.097865403 0.998640454 0.936982737 1 13.98633697 -3.874042093 15.58381183 1.008588793 1.016682901 0 0.045937493 0 0 0.011251212 0 0.000133647 3.874042093 0.008094108 ISPSS(ph)LSNNYNNMNNR ddPTM_A459_MK2206_30min_R1 1 ISPSSLSNNYNNMNNR 16 0 Q9Y4E8 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 IS(0.362)PS(0.034)S(0.529)LS(0.075)NNYNNMNNR 133.87 0.00049942 4318800 709.81 791.68 883.63 798.47 594.17 611.37 904.94 886.79 702.35 573.92 TRUE FALSE 649.4369321 740.1414881 823.6516575 859.9682978 570.5029507 645.9852411 844.5731038 879.0368885 775.3617959 645.0215425 1.006845337 1.147467859 1.276936665 1.333239653 0.884471158 1.001494056 1.309371933 1.362802373 1.202071163 1 9.333203534 -7.277452001 24.70442322 1.248794896 1.117885426 0.096391869 0.152858837 1551.740086 2394029.009 0.06732308 0.045550768 5.28E-08 7.277452001 -0.130909471 ISQRDPS(ph)PESNK ddPTM_A459_MK2206_30min_R1 2 ISQRDPSPESNK 12 1 Q8NDX5-2;Q8NDX5;Q8NDX5-7;E7EX82;Q8NDX5-3 Q8NDX5-2 PHC3 Polyhomeotic-like protein 3 1 ISQRDPS(0.949)PES(0.051)NK;ISQRDPS(0.773)PES(0.227)NK 133.88 0.0079719 43001000 9281.7 9128.3 9787 8614.3 8697.1 7378.5 7440.2 8712.1 6766.4 4180.8 TRUE FALSE 8492.242675 8534.046011 9122.685708 9277.774879 8350.676091 7796.264294 6943.877833 8635.931028 7469.791494 4698.749067 1.807341178 1.816237873 1.941513704 1.974520185 1.777212609 1.659221248 1.477814145 1.837921307 1.589740458 1 12.19806101 -11.6683205 0.201843976 1.12E-10 1.95104065 0.815507064 0.11648726 15.97768726 0.447277814 7.70759564 0.335467037 2.15E-12 11.6683205 1.95104065 ISQRDPS(ph)PESNK ddPTM_A459_MK2206_30min_R2 1 ISQRDPSPESNK 12 1 Q8NDX5-2;Q8NDX5;Q8NDX5-7;E7EX82;Q8NDX5-3 Q8NDX5-2 PHC3 Polyhomeotic-like protein 3 1 ISQRDPS(0.806)PES(0.194)NK 171.11 0.0013255 18010000 51389 88155 70623 83410 87694 67091 81809 56111 75697 64883 TRUE FALSE 55323.38135 83777.35089 72977.53557 76595.13618 84250.69293 69644.19502 71067.38003 63444.90036 82280.98823 62765.87302 0.881424549 1.334759589 1.162694503 1.22033093 1.342300981 1.109586972 1.132261476 1.010818416 1.310919203 1 15.93769273 ISQSALPPLPGS(ph)PAIQINGEWETHK ddPTM_A459_MK2206_30min_R1 2 ISQSALPPLPGSPAIQINGEWETHK 25 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 ISQSALPPLPGS(1)PAIQINGEWETHK;ISQSALPPLPGS(1)PAIQINGEWETHK 128.71 1.30E-08 9026500 7363.9 6333.1 5821.7 4691.8 5091.4 3922.4 4286.5 4509.2 4370.1 4049 TRUE FALSE 6737.561636 5920.814039 5426.539224 5053.163249 4888.598757 4144.482898 4000.555406 4469.77654 4824.387534 4550.620688 1.480580804 1.301100321 1.192483311 1.11043385 1.074270763 0.910751122 0.879123021 0.982234479 1.060160331 1 12.15184762 -5.107712719 0.718923254 0.961790534 1.644841775 0.897875584 0.05577895 0.640342921 0.339304517 0.027371748 0.329829335 7.80E-06 5.107712719 0.683051241 ISQSALPPLPGS(ph)PAIQINGEWETHK ddPTM_A459_MK2206_30min_R2 2 ISQSALPPLPGSPAIQINGEWETHK 25 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 ISQSALPPLPGS(1)PAIQINGEWETHK;ISQSALPPLPGS(1)PAIQINGEWETHK 123.06 5.09E-08 17448900 176894 166966 154762 167378 142145 147373 163768 119631 133889 142036 TRUE FALSE 190437.1406 158674.7112 159921.6878 153702.682 136563.6731 152981.3828 142265.0649 135267.1825 145534.4232 137401.377 1.385991501 1.154826209 1.163901639 1.118640041 0.993903235 1.113390464 1.035397665 0.984467445 1.059191883 1 17.06803694 -1.522878745 0.496608208 1.024221816 11.63584802 0.848155698 0.044402246 38.08002807 0.408431072 0.024114585 420.8324985 0.03 1.522878745 10.6116262 ISQTYQQQYGR ddPTM_A459_MK2206_30min_R2 1 ISQTYQQQYGR 11 0 P09525;Q6P452;P09525-2;B4E1S2 P09525 ANXA4 Annexin A4;Annexin 0 136.49 0.019547 2898000 2657.5 4816.4 4027.1 5830.2 3404.9 4104.8 4492.1 3306.1 4589 3706 FALSE TRUE 2860.960243 4577.22458 4161.361504 5353.85401 3271.206518 4261.01104 3902.281874 3738.218622 4988.142925 3585.073524 0.798019964 1.276744968 1.160746489 1.49337356 0.912451724 1.188542163 1.088480292 1.042717422 1.391364192 1 11.80778699 ISREPEPAAGPQAEESATVSAPAPMS(ph)PTR ddPTM_A459_MK2206_30min_R1 5 ISREPEPAAGPQAEESATVSAPAPMSPTR 29 1 Q9BWG6-2;Q9BWG6 Q9BWG6-2 SCNM1 Sodium channel modifier 1 1 ISREPEPAAGPQAEESATVSAPAPMS(0.982)PT(0.018)R;ISREPEPAAGPQAEESAT(0.002)VS(0.003)APAPMS(0.827)PT(0.167)R;ISREPEPAAGPQAEESAT(0.002)VS(0.004)APAPMS(0.916)PT(0.078)R;ISREPEPAAGPQAEESATVSAPAPMS(0.933)PT(0.067)R;ISREPEPAAGPQAEESATVSAPAPMS(0.796)PT(0.204)R 188.22 3.65E-34 79705100 6754.41 6232.98 6592 5759.56 7669.07 6686.91 6103.37 6318.23 4082.51 3085.59 TRUE FALSE 6179.911961 5827.211869 6144.553406 6203.162309 7363.594702 7065.517065 5696.225324 6262.990381 4506.901524 3467.856184 1.782055435 1.680349922 1.771859351 1.788759966 2.123385259 2.037430819 1.642578302 1.806012144 1.299621808 1 11.75982835 -8.408672552 1.90314587 0.995373697 1.843615561 0.799171766 0.140121478 0.148873362 1.127211162 0.146189223 0.041742826 3.90E-09 8.408672552 0.848241864 ISREPEPAAGPQAEESATVSAPAPMS(ph)PTR ddPTM_A459_MK2206_30min_R2 2 ISREPEPAAGPQAEESATVSAPAPMSPTR 29 1 Q9BWG6-2;Q9BWG6 Q9BWG6-2 SCNM1 Sodium channel modifier 1 1 ISREPEPAAGPQAEESAT(0.001)VS(0.004)APAPMS(0.902)PT(0.093)R;ISREPEPAAGPQAEESATVSAPAPMS(0.945)PT(0.055)R 142.81 1.10E-14 41239000 49475 103154 82909 112166 116829 116310 118395 76992 120188 87561 TRUE FALSE 53262.84404 98031.52236 85673.14468 103001.679 112241.7064 120736.2586 102849.5943 87055.11875 130641.735 84703.89174 0.628812242 1.157343781 1.011442838 1.216020621 1.325106841 1.425392105 1.214225134 1.027758193 1.542334506 1 16.37014064 -4.439758937 1.098716568 1.250658082 1.40E-16 0.514357419 0.170274377 2.653360573 1.608654431 0.051435008 4.610002646 3.63E-05 4.439758937 -1.250658082 ISRPGDS(ph)DDSR ddPTM_A459_MK2206_30min_R1 1 ISRPGDSDDSR 11 1 P14866;M0QXS5;A0A3B3ITJ4;P14866-2;M0QYL7;M0R1W6;B4DVF8 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 ISRPGDS(0.998)DDS(0.002)R 164.53 0.0030972 4351900 1999.4 1996.6 1731.7 1780.5 2427.5 2370.8 2378.4 2173.3 1826.5 1418.6 TRUE FALSE 1829.340531 1866.620977 1614.157029 1917.634419 2330.807535 2505.032647 2219.741276 2154.299067 2016.371211 1594.346878 1.147391798 1.170774693 1.012425245 1.202771144 1.461919967 1.571196759 1.392257423 1.351211018 1.264700448 1 10.63874983 -6.061713017 5.302182113 1.370526647 1.114318743 0.326672283 0.145911809 0.216242025 12.3581376 0.042850584 0.056912629 8.68E-07 6.061713017 -0.256207905 ISRPGDSDDS(ph)R ddPTM_A459_MK2206_30min_R1 1 ISRPGDSDDSR 11 1 P14866;M0QXS5;A0A3B3ITJ4;P14866-2;M0QYL7;M0R1W6;B4DVF8 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 ISRPGDS(0.004)DDS(0.996)R 149.41 0.0029987 1765700 1211.7 1046.5 1156 1180.6 1664.8 1537.7 1613.7 1313.3 1017.6 821.1 TRUE FALSE 1108.638552 978.3726598 1077.533941 1271.530017 1598.487491 1624.763245 1506.053017 1301.817957 1123.383162 922.824067 1.201354182 1.060194131 1.167648287 1.377868287 1.73216927 1.760642471 1.632004486 1.410689213 1.217331886 1 9.849911819 -5.847843502 3.530413652 1.506349541 1.130005061 0.272092173 0.222111513 0.266116977 6.496918023 0.065933535 0.105380592 1.42E-06 5.847843502 -0.37634448 ISRPGDSDDSR ddPTM_A459_MK2206_30min_R1 1 ISRPGDSDDSR 11 1 P14866;M0QXS5;A0A3B3ITJ4;P14866-2;M0QYL7;M0R1W6;B4DVF8 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 0 112.94 0.0078012 0 2006.2 2227.8 2276.2 1863.4 2510.6 2170 2434.6 2344.2 1925.7 1730.3 FALSE TRUE 1835.562155 2082.769815 2121.697886 2006.919391 2410.597486 2292.863525 2272.192276 2323.704907 2125.883406 1944.662627 0.943897481 1.071018585 1.091036489 1.032014172 1.239596757 1.179054656 1.168424921 1.194914158 1.093188801 1 10.92530417 -4.266164328 0.748917142 1.149365144 0.652951352 0.38135555 0.070071363 5.239344941 1.299208308 0.026794786 2.611113194 5.42E-05 4.266164328 -0.496413792 ISS(ph)LLEEQFQQGK ddPTM_A459_MK2206_30min_R2 2 ISSLLEEQFQQGK 13 0 P62241;Q5JR95 P62241 RPS8 40S ribosomal protein S8 1 IS(0.024)S(0.976)LLEEQFQQGK;IS(0.164)S(0.836)LLEEQFQQGK 177.21 0.00010335 10488500 76072 86538 78232 67813 75149 69843 78876 63190 64645 79425 TRUE FALSE 81896.13081 82240.64876 80840.21583 62272.46098 72198.27267 72500.92431 68519.48645 71449.14996 70267.70525 76833.36875 1.065892751 1.070376714 1.052149829 0.810487188 0.939673398 0.943612463 0.891793339 0.929923432 0.914546718 1 16.22944539 -5.640940144 8.626054496 0.916619048 1.066234206 0.683091213 0.045075243 0.132550885 9.38488752 0.011660102 0.020228151 2.29E-06 5.640940144 0.149615158 ISS(ph)PMHPSAGGQR ddPTM_A459_MK2206_30min_R2 1 ISSPMHPSAGGQR 13 0 O00267-2;O00267 O00267-2 SUPT5H Transcription elongation factor SPT5 1 IS(0.055)S(0.944)PMHPS(0.001)AGGQR 93.649 0.021206 0 6151.3 10143 7317.7 11654 12694 10973 12429 6762.7 11057 8218.4 TRUE FALSE 6622.248258 9639.313369 7561.668466 10701.83092 12195.56978 11390.5852 10797.05737 7646.60811 12018.71787 7950.234281 0.832962655 1.212456517 0.951125237 1.346102585 1.533988729 1.432735791 1.358080402 0.961809154 1.511743862 1 12.95678166 -5.766624318 24.99479592 1.321666517 1.020208954 0.325507123 0.201303051 147.8578077 712775.4982 0.05579671 0.085657843 1.71E-06 5.766624318 -0.301457563 ISS(ph)PTETER ddPTM_A459_MK2206_30min_R1 3 ISSPTETER 9 0 P31949 P31949 S100A11 "Protein S100-A11;Protein S100-A11, N-terminally processed" 1 IS(0.045)S(0.952)PT(0.003)ETER;IS(0.038)S(0.962)PTETER;IS(0.039)S(0.96)PT(0.001)ETER 197.79 0.00050713 78358000 10391 10335.7 10994.3 10133.4 10746.8 10038.4 11381 10364 9200.3 8425.5 TRUE FALSE 9507.190885 9662.844051 10248.03755 10913.87622 10318.7322 10606.76553 10621.79426 10273.38864 10156.70411 9469.314549 1.003999903 1.020437541 1.08223647 1.152551873 1.089702126 1.120119675 1.121706772 1.084913653 1.072591269 1 13.20904428 -5.271844617 3.644287541 1.098721072 1.008696551 0.394298949 0.038322863 0.191403538 5.599646838 0.009695399 0.025681903 5.35E-06 5.271844617 -0.090024521 ISS(ph)PTETER ddPTM_A459_MK2206_30min_R2 4 ISSPTETER 9 0 P31949 P31949 S100A11 "Protein S100-A11;Protein S100-A11, N-terminally processed" 1 IS(0.346)S(0.651)PT(0.002)ETER;IS(0.009)S(0.991)PTETER;IS(0.032)S(0.967)PT(0.001)ETER;IS(0.037)S(0.962)PT(0.001)ETER 201.61 0.00048639 156932000 390152 536448 470494 508594 471473 460364 418794 351807 449754 434282 TRUE FALSE 420022.3371 509808.7724 486180.0351 467040.2433 452960.6011 477883.4746 363805.8447 397789.3828 488872.79 420111.4139 0.999787969 1.213508502 1.157264523 1.111705676 1.078191608 1.137516046 0.865974674 0.946866402 1.163674144 1 18.68041246 -7.221656587 24.99670995 0.989700931 1.120663356 0.32435882 0.086171094 592.219254 372109.4366 0.032894708 0.025479771 6.00E-08 7.221656587 0.130962425 ISS(ph)TPPSGSR ddPTM_A459_MK2206_30min_R1 1 ISSTPPSGSR 10 0 Q3Y452 Q3Y452 TDRG1 Testis development-related protein 1 1 ISS(0.773)T(0.226)PPSGSR 111.5 0.008813 10574000 5796.8 5365.6 5990.8 4556.8 6074 5681.8 6005.2 4872.1 4713.9 4003.8 TRUE FALSE 5303.75172 5016.298465 5584.161187 4907.765526 5832.059718 6003.498606 5604.604065 4829.503743 5203.926774 4499.820971 1.178658385 1.114777343 1.240974079 1.090657952 1.296064834 1.33416388 1.245517122 1.073265753 1.156474181 1 12.13565189 -8.438677444 1.238315153 1.010754616 1.209723172 0.374218056 0.079638188 0.514455216 1.709499258 0.08038298 0.025139484 3.64E-09 8.438677444 0.198968556 ISS(ph)TPTTETIR ddPTM_A459_MK2206_30min_R1 1 ISSTPTTETIR 11 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 IS(0.005)S(0.897)T(0.087)PT(0.007)T(0.004)ETIR 126.66 0.0034334 0 3121.5 2557.2 2235 2504.4 3112.5 2744.9 2424.5 2446 2032.1 1739.4 TRUE FALSE 2856.000033 2390.725815 2083.294427 2697.289322 2988.522534 2900.313866 2262.766029 2424.61488 2243.344067 1954.890004 1.460951781 1.222946463 1.065683708 1.379765264 1.528742041 1.483619979 1.157490204 1.240281998 1.147555137 1 10.93287172 -8.258140968 1.111455051 1.012968281 1.335677702 0.389729287 0.136758493 0.565848517 1.41195265 0.142562238 0.047446883 5.52E-09 8.258140968 0.322709421 ISS(ph)VPNSLSK ddPTM_A459_MK2206_30min_R1 1 ISSVPNSLSK 10 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;X6R5W5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 IS(0.129)S(0.71)VPNS(0.151)LS(0.01)K 89.9 0.030193 14544000 4540.8 4917.6 4283.4 4042.4 4178.1 3677.4 4614.1 4606.1 4049.6 3526.8 TRUE FALSE 4154.581115 4597.463346 3992.654742 4353.746348 4011.67743 3885.61121 4306.301808 4565.829353 4470.570412 3963.72661 1.04815027 1.159884068 1.007298216 1.098397235 1.012097408 0.980292435 1.086427555 1.151903197 1.127870525 1 11.95264174 -7.514853189 24.91208226 1.107765197 1.052614825 0.083595207 0.060426948 730.3379609 2267056.19 0.027203424 0.016615893 3.06E-08 7.514853189 -0.055150372 ISSDLDGHPVPK ddPTM_A459_MK2206_30min_R2 1 ISSDLDGHPVPK 12 0 P29401;P29401-2;E9PFF2;F8W888 P29401 TKT Transketolase 0 93.839 0.027747 13327000 273500 349570 290480 411230 380980 372660 469100 343400 312700 356530 FALSE TRUE 294439.3703 332210.8621 300164.4582 377631.1935 366020.8109 386841.8374 407506.6065 388283.5591 339898.0808 344896.4553 0.853703672 0.963219126 0.870303112 1.094911785 1.061248399 1.121617319 1.181533183 1.125797477 0.985507608 1 18.39580378 -5.766811637 24.99369897 1.091751844 0.902489672 0.654122878 0.061532553 75.3080003 350362.2584 0.017323002 0.026559071 1.71E-06 5.766811637 -0.189262173 ISSGKSS(ph)PFK ddPTM_A459_MK2206_30min_R1 1 ISSGKSSPFK 10 1 O95810 O95810 SDPR Serum deprivation-response protein 1 ISSGKS(0.017)S(0.983)PFK 131.17 0.012601 21639000 7331 8875.7 8813.5 9545.3 8522 5654.6 6019.1 8496.8 4468.7 2570.3 TRUE FALSE 6707.459953 8297.890317 8215.264176 10280.48066 8182.550694 5974.758565 5617.576821 8422.513373 4933.237356 2888.728169 2.321942239 2.872506457 2.843903509 3.558825912 2.832578982 2.068300725 1.944654011 2.915647607 1.707754094 1 11.49621874 -6.745372442 5.347655609 2.043734284 2.927025208 0.447729962 0.52435091 0.183727321 15.13999719 0.177511797 0.169486764 1.80E-07 6.745372442 0.883290924 ISSIQS(ph)IVPALEIANAHR ddPTM_A459_MK2206_30min_R1 2 ISSIQSIVPALEIANAHR 18 0 P10809 P10809 HSPD1 "60 kDa heat shock protein, mitochondrial" 1 IS(0.087)S(0.087)IQS(0.826)IVPALEIANAHR;IS(0.079)S(0.079)IQS(0.842)IVPALEIANAHR 97.825 0.002263 24335000 9489.3 9269 7296 7972.6 8161.7 8355.8 7984 6285.7 7246.3 7523.4 TRUE FALSE 8682.185205 8665.586415 6800.767848 8586.651033 7836.602206 8828.898175 7451.401928 6230.744788 7999.578816 8455.455591 1.026814595 1.024851508 0.804305312 1.01551607 0.926810167 1.044165874 0.881253748 0.736890487 0.946084895 1 13.04566678 -7.43517872 9.294136877 0.866857838 0.967890486 0.143214933 0.09173234 0.63415184 63.18428192 0.037529825 0.025246766 3.67E-08 7.43517872 0.101032648 ISSIQSIVPALEIANAHR ddPTM_A459_MK2206_30min_R1 2 ISSIQSIVPALEIANAHR 18 0 P10809 P10809 HSPD1 "60 kDa heat shock protein, mitochondrial" 0 ; 139.39 0.00045916 23180000 9450.2 9500.9 8637 8649.7 9482.3 10284 9799.2 8598.2 8269.4 9110.3 FALSE TRUE 8646.410865 8882.389683 8050.744504 9315.901393 9104.599912 10866.27119 9145.513248 8523.026844 9129.033722 10238.95274 0.844462425 0.867509589 0.786285932 0.909849047 0.889212026 1.061267833 0.893207878 0.832411972 0.891598384 1 13.32178054 -5.88988536 7.051045491 0.922252465 0.83655782 0.311335822 0.063155382 0.308659854 18.05325359 0.018762671 0.028005635 1.29E-06 5.88988536 -0.085694645 ISSLLEEQFQQGK ddPTM_A459_MK2206_30min_R1 2 ISSLLEEQFQQGK 13 0 P62241;Q5JR95 P62241 RPS8 40S ribosomal protein S8 0 ; 192.68 0.0025057 11328800 3097.6 2999.1 3394.7 3258.7 3692.7 2810.9 3471.3 3034.2 2660.46 3134.7 FALSE TRUE 2834.132854 2803.858045 3164.277222 3509.685639 3545.61194 2970.050729 3239.735911 3007.672309 2937.024338 3523.050302 0.804454269 0.795860917 0.898164077 0.996206508 1.006404007 0.84303387 0.919582644 0.853712565 0.833659496 1 11.78260936 -5.307192338 4.770264295 0.917721066 0.799279686 0.376434915 0.06141499 0.214833429 11.34764819 0.017307523 0.039341688 4.93E-06 5.307192338 -0.11844138 ISSLPVS(ph)RPISPSPSAILER ddPTM_A459_MK2206_30min_R1 1 ISSLPVSRPISPSPSAILER 20 1 Q5T5P2-3;Q5T5P2;Q5T5P2-4;Q5T5P2-8;Q5T5P2-6;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-10;Q5T5P0;Q5T5P1 Q5T5P2-3 KIAA1217 Sickle tail protein homolog 1 IS(0.002)S(0.006)LPVS(0.729)RPIS(0.226)PS(0.035)PS(0.003)AILER 74.793 0.0034832 57004000 1539.4 1940.3 1691.9 1624.8 2025.9 1441.4 1651 1614.8 1598.5 1146 TRUE FALSE 1408.465946 1813.986117 1577.058542 1749.942378 1945.204113 1523.010822 1540.864802 1600.681974 1764.669795 1287.975132 1.093550575 1.408401508 1.224447975 1.358677147 1.5102808 1.18248465 1.196346703 1.242789503 1.370111698 1 10.33088902 ISSLPVSRPIS(ph)PSPSAILER ddPTM_A459_MK2206_30min_R1 1 ISSLPVSRPISPSPSAILER 20 1 Q5T5P2-3;Q5T5P2;Q5T5P2-4;Q5T5P2-8;Q5T5P2-6;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-10;Q5T5P0;Q5T5P1 Q5T5P2-3 KIAA1217 Sickle tail protein homolog 1 ISSLPVS(0.001)RPIS(0.719)PS(0.214)PS(0.065)AILER 73.831 0.0038188 54902000 1628.7 1693.1 1971.2 1810.2 1360.9 1658.2 1557.3 1908.3 1769.6 1378.1 TRUE FALSE 1490.170512 1582.878882 1837.400436 1949.621918 1306.692471 1752.085851 1453.415358 1891.615934 1953.556253 1548.829432 0.962126934 1.02198399 1.186315548 1.258771222 0.843664541 1.131232281 0.938396009 1.221319724 1.261311421 1 10.59696256 -7.786916551 24.99199383 1.180986718 1.056516837 0.124611427 0.131731772 452.1986742 443580.6354 0.071753828 0.034489508 1.63E-08 7.786916551 -0.12446988 ISSLPVSRPIS(ph)PSPSAILER ddPTM_A459_MK2206_30min_R2 1 ISSLPVSRPISPSPSAILER 20 1 Q5T5P2-3;Q5T5P2;Q5T5P2-4;Q5T5P2-8;Q5T5P2-6;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-10;Q5T5P0;Q5T5P1 Q5T5P2-3 KIAA1217 Sickle tail protein homolog 1 ISS(0.001)LPVSRPIS(0.729)PS(0.262)PS(0.008)AILER 102.27 0.00035812 38676000 37770 42693 40620 54432 47647 46578 46408 44004 50945 41296 TRUE FALSE 40661.70024 40572.9277 41974.25053 49984.73148 45776.13937 48350.55843 40314.57385 49755.47389 55376.10401 39948.5149 1.017852612 1.015630438 1.050708659 1.251228778 1.145878376 1.210321799 1.009163268 1.245489952 1.386186799 1 15.28585425 -5.635671366 6.051706792 1.181110525 1.020942501 0.292884298 0.107592852 0.258423465 12.66118237 0.02932791 0.051308387 2.31E-06 5.635671366 -0.160168025 ISST(ph)PTTETIR ddPTM_A459_MK2206_30min_R1 1 ISSTPTTETIR 11 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 ISS(0.019)T(0.974)PT(0.005)T(0.001)ETIR 119.39 0.011774 7905800 3554 3485.5 3076 2387.6 3268.5 3870.6 3342.4 3277.7 2577.6 2068.9 TRUE FALSE 3251.713637 3258.593316 2867.20969 2571.493366 3138.308724 4089.750027 3119.434595 3249.043414 2845.550744 2325.210951 1.398459626 1.401418359 1.233096588 1.10591831 1.349687744 1.758872684 1.341570576 1.397311247 1.223781757 1 11.18314589 -8.580913819 2.756661147 1.000454493 1.371481692 0.354174798 0.156192064 0.389389359 7.248945306 0.163623583 0.04390787 2.62E-09 8.580913819 0.3710272 ISSVPNS(ph)LSK ddPTM_A459_MK2206_30min_R1 1 ISSVPNSLSK 10 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;X6R5W5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 IS(0.019)S(0.049)VPNS(0.912)LS(0.02)K 82.171 0.043285 11837000 5477 4550.4 5065 4461.4 4745.4 4498.1 4727.9 4799.9 4723.9 4378.1 TRUE FALSE 5011.152389 4254.168133 4721.201912 4805.017801 4556.380669 4752.778535 4412.510418 4757.93498 5214.96631 4920.492081 1.018425049 0.864581847 0.959497919 0.976531965 0.926001017 0.96591529 0.89676202 0.966963243 1.0598465 1 12.26458689 -8.086952886 5.443298814 1.027758249 0.942173482 0.387946268 0.042477634 0.214331646 10.12201311 0.027771557 0.010216413 8.19E-09 8.086952886 -0.085584767 IST(ph)PLTGVR ddPTM_A459_MK2206_30min_R1 2 ISTPLTGVR 9 0 Q08999;F5H837;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 IS(0.021)T(0.979)PLTGVR;IS(0.046)T(0.954)PLTGVR 147.73 0.0037595 19298400 12729.2 13459.6 12676.7 11139.9 11745.2 11155.5 11247.5 11403.7 11079.9 10263.8 TRUE FALSE 11646.5147 12583.37759 11816.24092 11997.89703 11277.36381 11787.11477 10497.1998 11303.99865 12231.69525 11535.35703 1.009636257 1.090852893 1.024349822 1.040097588 0.97763457 1.021824876 0.910002158 0.979943544 1.060365554 1 13.49377504 -6.249961504 19.34998815 0.988054137 1.043572455 0.259778591 0.040678321 47.21199603 79588.84919 0.01216009 0.015461886 5.62E-07 6.249961504 0.055518318 IST(ph)PLTGVR ddPTM_A459_MK2206_30min_R2 1 ISTPLTGVR 9 0 Q08999;F5H837;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 IS(0.031)T(0.969)PLTGVR 110.53 0.025249 2532300 30430 29998 28049 34666 30591 31983 34004 26730 28624 30976 TRUE FALSE 32759.7442 28508.34294 28984.13966 31833.67691 29389.84363 33200.13548 29539.23395 30223.70278 31113.66378 29965.25566 1.093257624 0.951379934 0.967258214 1.062352922 0.98079736 1.107954354 0.985782811 1.008624893 1.038324656 1 14.87100306 -4.72452707 24.04783135 1.013131133 1.093258756 0.231345767 0.044668351 6266.57874 4082171.89 0.010997311 2.541380416 1.89E-05 4.72452707 0.080127623 ISTAS(ph)GDGR ddPTM_A459_MK2206_30min_R1 1 ISTASGDGR 9 0 A0A0A0MR13;A0A590UJY2;A0A590UJF0;B0AZR9;A0A590UJ58;P63092-3;P63092-2;P63092;P63092-4;Q5JWF2-2;Q5JWF2 A0A0A0MR13 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas 1 IS(0.001)T(0.011)AS(0.988)GDGR 88.134 0.031598 14200000 5852.7 5064.3 3473.3 3926.6 4340 3691.5 5497.4 5705.2 749.29 3475.8 TRUE FALSE 5354.897131 4734.61315 3237.542073 4229.027412 4167.12861 3900.50954 5130.678477 5655.320038 827.1813769 3906.408345 1.370798099 1.212011836 0.828777175 1.082587133 1.066741682 0.998489967 1.31340045 1.447703245 0.211749849 1 11.93162705 -5.022547945 6.35235641 1.026116433 1.336245042 0.129804918 0.311449434 0.310919026 50.97329389 0.07675508 0.235474722 9.49E-06 5.022547945 0.310128609 ISTAS(ph)GDGR ddPTM_A459_MK2206_30min_R2 1 ISTASGDGR 9 0 A0A0A0MR13;A0A590UJY2;A0A590UJF0;B0AZR9;A0A590UJ58;P63092-3;P63092-2;P63092;P63092-4;Q5JWF2-2;Q5JWF2 A0A0A0MR13 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas 1 IST(0.01)AS(0.99)GDGR 97.597 0.02045 19824000 84390 60010 82201 74188 96277 73728 92608 66832 100860 91989 TRUE FALSE 90850.96328 57029.99066 84941.54031 68126.60308 92496.68123 76533.7707 80448.45836 75567.17187 109632.6205 88987.40646 1.020941804 0.640877096 0.954534396 0.76557578 1.039435634 0.860051706 0.904043185 0.849189508 1.232001525 1 16.44131356 -8.24777292 24.8805883 1.116000764 0.875615496 0.373631431 0.12249771 614.0998136 1118010.397 0.077578483 0.028958877 5.65E-09 8.24777292 -0.240385269 ISTCAPSTLHITQNTEQELHS(ph)PTVK ddPTM_A459_MK2206_30min_R1 1 ISTCAPSTLHITQNTEQELHSPTVK 25 0 Q8WVV4-3;Q8WVV4;Q8WVV4-1 Q8WVV4-3 POF1B Protein POF1B 1 ISTCAPSTLHITQNT(0.002)EQELHS(0.873)PT(0.125)VK 74.742 0.00016748 6134600 1834.2 1022.2 1414.1 924.98 1858.4 1423.7 1322.9 1290.3 1210.6 827.66 TRUE FALSE 1678.191658 955.6545942 1318.114832 996.2221199 1784.375993 1504.308664 1234.651755 1279.019043 1336.446202 930.1967693 1.804125443 1.027368215 1.417027962 1.070979983 1.918277994 1.617194032 1.327301702 1.374998372 1.436734943 1 9.861392119 -9.665395025 0.937520722 0.992171431 1.438370478 0.1984121 0.267661168 19.03264649 13.6832455 0.83359903 0.083936543 2.16E-10 9.665395025 0.446199047 ISTCAPSTLHITQNTEQELHS(ph)PTVK ddPTM_A459_MK2206_30min_R2 1 ISTCAPSTLHITQNTEQELHSPTVK 25 0 Q8WVV4-3;Q8WVV4;Q8WVV4-1 Q8WVV4-3 POF1B Protein POF1B 1 ISTCAPSTLHITQNTEQELHS(0.682)PT(0.318)VK 146.8 6.32E-10 5250100 6745.2 12789 7100.9 13962 11441 10271 9176.9 7044.2 6487.5 6627.3 TRUE FALSE 7261.617698 12153.91686 7337.640462 12821.25994 10991.76885 10661.8701 7971.962007 7964.901126 7051.771023 6411.051744 1.132671828 1.895775817 1.144529908 1.999868423 1.714503219 1.663045399 1.243471793 1.242370432 1.099939808 1 12.64634534 -7.394265178 3.145909272 1.138149762 1.609835423 0.398612254 0.269532276 0.270773929 5.063519966 0.122250835 0.0765062 4.03E-08 7.394265178 0.471685661 ISTCAPSTLHITQNTEQELHSPT(ph)VK ddPTM_A459_MK2206_30min_R2 2 ISTCAPSTLHITQNTEQELHSPTVK 25 0 Q8WVV4-3;Q8WVV4;Q8WVV4-1 Q8WVV4-3 POF1B Protein POF1B 1 ISTCAPSTLHITQNTEQELHS(0.427)PT(0.572)VK;ISTCAPSTLHITQNTEQELHS(0.36)PT(0.64)VK 107.18 2.18E-07 23277900 28087 59694 42313 65675 54363 52346 48775 35238 37718 33813 TRUE FALSE 30237.36232 56729.68276 43723.6943 60309.14242 52228.43547 54338.06371 42370.78391 39843.72759 40998.64346 32709.68458 0.9244162 1.734339034 1.336720145 1.843770223 1.596726968 1.661222491 1.295358988 1.218101859 1.25340993 1 14.99743023 -7.461689824 3.975619335 1.185294519 1.535840604 0.300037963 0.246703781 0.289336113 9.09085179 0.110111831 0.068756036 3.45E-08 7.461689824 0.350546085 ISTPQTNTVPIKPLIS(ph)TPPVSSQPK ddPTM_A459_MK2206_30min_R2 1 ISTPQTNTVPIKPLISTPPVSSQPK 25 1 Q9BTA9-5;Q9BTA9;A0A0A0MRT2;Q9BTA9-2 Q9BTA9-5 WAC WW domain-containing adapter protein with coiled-coil 1 ISTPQT(0.001)NT(0.001)VPIKPLIS(0.477)T(0.477)PPVS(0.031)S(0.013)QPK 51.475 0.016051 7339900 28254 26743 26202 32678 29222 26804 25775 26668 26368 33912 TRUE FALSE 30417.14796 25414.98151 27075.5616 30008.10287 28074.59745 27824.045 22390.71154 30153.59916 28661.44098 32805.45422 0.927197891 0.774718172 0.825337196 0.914729077 0.855790542 0.848153018 0.682530149 0.919164203 0.873679138 1 15.00164808 -8.66653119 1.590053482 0.998153209 0.837172424 0.314342089 0.069713836 0.708660688 3.642888991 0.066387906 0.019171185 2.16E-09 8.66653119 -0.160980785 ISVGRLS(ph)PQQESSASSK ddPTM_A459_MK2206_30min_R1 1 ISVGRLSPQQESSASSK 17 1 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 ISVGRLS(0.989)PQQES(0.009)S(0.001)ASSK 132.01 0.0030425 0 1332 1253.8 1279.2 1092.4 1017.1 1189.1 1038.2 1270.1 1154 804.26 TRUE FALSE 1218.706405 1172.177392 1192.371468 1176.536837 976.5867533 1256.425814 968.9435723 1258.99565 1273.96243 903.8978007 1.348278981 1.296803014 1.319144119 1.301625954 1.080417225 1.390008708 1.071961423 1.392851768 1.409409812 1 9.820015853 -11.73536524 2.508474155 0.028116492 1.284832801 0.365576129 0.114445373 23244368.04 18788111.82 121577806.5 0.030223616 1.84E-12 11.73536524 1.256716309 ISVGRLS(ph)PQQESSASSK ddPTM_A459_MK2206_30min_R2 2 ISVGRLSPQQESSASSK 17 1 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 IS(0.123)VGRLS(0.877)PQQESSASSK;IS(0.007)VGRLS(0.993)PQQESSASSK 122.94 0.0050669 9876500 46831.5 51054 50352.5 52085 53528 50519 63407 43568 44931.9 56558 TRUE FALSE 50416.95565 48518.7326 52031.22722 47829.48889 51426.22176 52441.53595 55081.58473 49262.48719 48839.99544 54712.51709 0.921488506 0.886794013 0.950993118 0.874196462 0.93993522 0.958492475 1.00674558 0.900387878 0.892665848 1 15.73958331 -6.500111566 23.2711319 0.948913145 0.909520933 0.215466358 0.038977143 563.7692036 576248.0926 0.012407293 0.01394474 3.16E-07 6.500111566 -0.039392212 ISVSS(ph)PGR ddPTM_A459_MK2206_30min_R1 2 ISVSSPGR 8 0 O75864-2;O75864 O75864-2 PPP1R37 Protein phosphatase 1 regulatory subunit 37 1 IS(0.001)VS(0.025)S(0.974)PGR;IS(0.001)VS(0.075)S(0.924)PGR 114.89 0.01011 84356000 17359.1 15800.1 15508.7 14592.8 16987.9 14593.1 16190.5 14869.1 12986.1 12336.9 TRUE FALSE 15882.61739 14771.51062 14456.01265 15716.73998 16311.23597 15419.34871 15110.46129 14739.10103 14336.05157 13865.28831 1.145494925 1.065359067 1.042604548 1.133531423 1.176407991 1.112082805 1.089805055 1.063021604 1.033952648 1 13.75919 -8.112463989 1.363019726 1.004242439 1.110382521 0.529714752 0.036033408 0.382494776 1.297495563 0.036936258 0.012001374 7.72E-09 8.112463989 0.106140081 ISVSS(ph)PGR ddPTM_A459_MK2206_30min_R2 3 ISVSSPGR 8 0 O75864-2;O75864 O75864-2 PPP1R37 Protein phosphatase 1 regulatory subunit 37 1 IS(0.001)VS(0.046)S(0.953)PGR;ISVS(0.025)S(0.974)PGR;ISVS(0.083)S(0.916)PGR 109.44 0.01245 105293000 656680 861460 760030 858150 725750 811320 757520 816190 748800 707850 TRUE FALSE 706955.9257 818681.1491 785369.0209 788036.3999 697253.4084 842195.3511 658056.7141 922868.8354 813929.2705 684752.9125 1.032424854 1.195586224 1.146937832 1.150833221 1.018255484 1.229925913 0.961013385 1.34773992 1.188646672 1 19.38522397 -7.7637044 24.99995825 1.201144899 1.113325759 0.070947238 0.111259592 130.4962272 1440273.707 0.053441579 0.027626387 1.72E-08 7.7637044 -0.08781914 ISVYYNEATGGK ddPTM_A459_MK2206_30min_R1 2 ISVYYNEATGGK 12 0 P07437;Q5JP53 P07437 TUBB Tubulin beta chain 0 ; 199.82 0.0014486 38210000 6114.8 6230.6 6329.9 6852.5 6648.7 5978.7 6143.3 6238.6 5055.6 5231.1 FALSE TRUE 5594.70415 5824.986808 5900.244024 7380.280737 6383.8682 6317.208827 5733.491666 6184.056578 5581.147712 5879.168161 0.951614922 0.99078418 1.003584838 1.255327375 1.085845485 1.074507252 0.975221581 1.051859108 0.949309079 1 12.52139633 -7.254030764 23.81367559 0.998419034 1.064569732 0.137689089 0.080417907 693.4513536 2228982.766 0.033939406 0.025709452 5.57E-08 7.254030764 0.066150698 ISYIPDEEVS(ph)SPSPPQR ddPTM_A459_MK2206_30min_R1 1 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 ISYIPDEEVS(0.484)S(0.484)PS(0.031)PPQR 70.26 0.032397 3541500 1201.5 1230.9 961.06 1431.7 1160 1212.1 1338.1 1296.7 1316.6 1138 TRUE FALSE 1099.306116 1150.768186 895.8259249 1541.969782 1113.794744 1280.728055 1248.837791 1285.363089 1453.465281 1278.984031 0.859515122 0.899751801 0.700419945 1.205620824 0.870843354 1.0013636 0.976429541 1.004987597 1.136421758 1 10.32078254 -5.750150707 24.99972138 1.018359355 0.827881285 0.484732699 0.097847841 197.9995799 438482.9343 0.025763597 0.044117965 1.78E-06 5.750150707 -0.19047807 ISYIPDEEVS(ph)SPSPPQR ddPTM_A459_MK2206_30min_R2 2 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 IS(0.001)Y(0.002)IPDEEVS(0.491)S(0.491)PS(0.015)PPQR;ISYIPDEEVS(0.5)S(0.5)PSPPQR 274.81 3.87E-52 23734000 90137 108110 103073 114910 107237 103633 110198 79865 87855 97926 TRUE FALSE 97037.95802 102741.4146 106509.4024 105521.4854 103026.3366 107576.8264 95728.87023 90303.62972 95496.46909 94730.68264 1.024356157 1.084563224 1.124339015 1.113910324 1.087570929 1.135607001 1.01053711 0.953266959 1.008083827 1 16.53154416 -7.406026848 5.147984293 0.984885295 1.096073485 0.719182559 0.031438437 0.119633072 4.569560181 0.013832767 0.009123873 3.93E-08 7.406026848 0.11118819 ISYIPDEEVSS(ph)PSPPQR ddPTM_A459_MK2206_30min_R1 3 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 ISYIPDEEVS(0.398)S(0.601)PS(0.001)PPQR;ISYIPDEEVS(0.23)S(0.77)PSPPQR;ISYIPDEEVS(0.018)S(0.622)PS(0.36)PPQR 226.06 3.66E-16 64968000 9583 9152.4 9036.9 7986.7 9097.2 7500 8299.9 7753.2 7223.1 7196.2 TRUE FALSE 8767.915528 8556.577096 8423.500406 8601.837018 8734.83926 7924.643519 7746.228815 7685.41459 7973.967093 8087.719585 1.084102315 1.057971534 1.041517367 1.063567663 1.080012625 0.979836583 0.957776631 0.950257302 0.985935159 1 12.98151726 -6.807010486 6.51783723 0.969869668 1.063572276 0.872923937 0.017252472 0.064625862 6.608605082 0.006139458 0.005474387 1.56E-07 6.807010486 0.093702608 ISYIPDEEVSS(ph)PSPPQR ddPTM_A459_MK2206_30min_R2 2 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 ISYIPDEEVS(0.347)S(0.653)PSPPQR;ISYIPDEEVS(0.226)S(0.773)PS(0.001)PPQR 276.34 7.11E-53 22256300 232120 254347 256654 300557 256494 265313 267637 204785 234985 249944 TRUE FALSE 249891.2857 241716.4978 265210.7163 276000.5317 246422.7568 275409.6721 232495.9404 231551.1026 255423.5705 241788.3477 1.033512524 0.99970284 1.09687137 1.141496413 1.019167214 1.139052707 0.96156801 0.957660304 1.056393217 1 17.88338519 -7.28053064 24.97533592 0.990377073 1.070302143 0.358798947 0.050798418 944.1161657 1235095.256 0.021679579 0.014638895 5.24E-08 7.28053064 0.07992507 ISYIPDEEVSSPS(ph)PPQR ddPTM_A459_MK2206_30min_R1 1 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 ISYIPDEEVS(0.001)S(0.06)PS(0.939)PPQR 242.9 7.73E-23 16845000 2979.2 2718.4 2435.6 2298.2 2987 2692.3 2940.5 2551.7 2181 2240.1 TRUE FALSE 2725.803396 2541.431666 2270.278258 2475.207762 2868.021465 2844.735699 2744.34461 2529.390756 2407.722755 2517.6205 1.08269034 1.009457806 0.90175555 0.983153641 1.139179422 1.129930305 1.090054919 1.004675151 0.956348566 1 11.29784512 -4.748372375 23.25944383 1.027887973 1.082690665 0.054670613 0.071657405 1083.996056 1929238.33 0.020203912 0.339934543 1.78E-05 4.748372375 0.054802692 ISYIPDEEVSSPS(ph)PPQR ddPTM_A459_MK2206_30min_R2 2 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 ISYIPDEEVS(0.005)S(0.147)PS(0.849)PPQR;ISYIPDEEVSSPS(1)PPQR 245.18 2.54E-23 18037000 31329 40241 34671 36508 39065 41808 38896 33692 32792 36782 TRUE FALSE 33727.57233 38242.69046 35826.91384 33525.17962 37531.11181 43399.03274 33788.90848 38095.66008 35644.18889 35581.80635 0.947888142 1.074782153 1.006888562 0.942200047 1.054783769 1.219697289 0.949611949 1.070649975 1.001753214 1 15.11885213 -6.461555099 23.93963888 1.056660063 0.999620594 0.113189525 0.074924447 344.3227111 134416.5749 0.023310072 0.026431084 3.45E-07 6.461555099 -0.057039469 ISYT(ph)PPES(ph)PVPSYASSTPLHVPVPR ddPTM_A459_MK2206_30min_R1 2 ISYTPPESPVPSYASSTPLHVPVPR 25 0 P41212 P41212 ETV6 Transcription factor ETV6 2 IS(0.156)Y(0.396)T(0.492)PPES(0.933)PVPS(0.023)Y(0.001)ASSTPLHVPVPR;IS(0.068)Y(0.22)T(0.714)PPES(0.998)PVPSYASSTPLHVPVPR 102.19 7.24E-06 7675200 2577.1 2576.3 2847.4 1995.68 2836.5 2226.6 2615.7 2267.7 1849.58 2122.8 TRUE FALSE 2357.904112 2408.582402 2654.126421 2149.387619 2723.516199 2352.668168 2441.211426 2247.873738 2041.85046 2385.78849 0.988312301 1.009554037 1.112473479 0.900912897 1.141558109 0.986117662 1.023230448 0.942193219 0.855838842 1 11.22025043 -7.815191039 4.11909942 0.919585684 1.024935613 0.253439689 0.070952703 0.265189571 9.142452834 0.03845574 0.017972818 1.53E-08 7.815191039 0.10534993 ISYT(ph)PPES(ph)PVPSYASSTPLHVPVPR ddPTM_A459_MK2206_30min_R2 3 ISYTPPESPVPSYASSTPLHVPVPR 25 0 P41212 P41212 ETV6 Transcription factor ETV6 2 IS(0.072)Y(0.191)T(0.741)PPES(0.977)PVPS(0.012)Y(0.004)AS(0.001)S(0.001)T(0.001)PLHVPVPR;IS(0.165)Y(0.114)T(0.729)PPES(0.991)PVPSYASSTPLHVPVPR;IS(0.013)Y(0.003)T(0.984)PPES(1)PVPSYASSTPLHVPVPR 109.14 7.33E-07 10716200 30488.1 41588.6 34280.3 46518.4 42165.7 44032.4 43645.1 34991.7 37702.4 40385.4 TRUE FALSE 32822.29238 39523.3706 35423.18809 42717.69792 40510.06275 45708.08384 37914.44594 39565.23533 40981.6866 39067.62771 0.8401404 1.011665487 0.906714591 1.093429533 1.036921491 1.169973365 0.970482422 1.012737083 1.048993476 1 15.25368603 -3.728268094 0.815953181 1.044358209 9.43E-14 0.440980978 0.065172837 10.98630868 1.538588231 0.023196211 15.48905763 0.000186953 3.728268094 -1.044358209 ISYT(ph)PPESPVPSYASSTPLHVPVPR ddPTM_A459_MK2206_30min_R1 1 ISYTPPESPVPSYASSTPLHVPVPR 25 0 P41212 P41212 ETV6 Transcription factor ETV6 1 IS(0.045)Y(0.001)T(0.954)PPESPVPSYASSTPLHVPVPR 135.57 5.97E-08 45704000 2287.8 1410.8 2312.6 1299.4 3083.3 2222 2456.3 2086.9 1729.5 1700.6 TRUE FALSE 2093.210596 1318.956664 2155.627155 1399.480013 2960.485632 2347.80772 2292.444709 2068.654453 1909.287714 1911.283167 1.095186016 0.690089614 1.127842903 0.732220132 1.548951868 1.228393448 1.199427039 1.082338028 0.998955962 1 10.90032582 -6.232593675 24.99936183 1.18421801 0.910996349 0.30930166 0.193793846 877.8646827 760808.365 0.056157023 0.072485725 5.85E-07 6.232593675 -0.273221661 ISYT(ph)PPESPVPSYASSTPLHVPVPR ddPTM_A459_MK2206_30min_R2 2 ISYTPPESPVPSYASSTPLHVPVPR 25 0 P41212 P41212 ETV6 Transcription factor ETV6 1 IS(0.053)Y(0.147)T(0.622)PPES(0.179)PVPSYASSTPLHVPVPR;IS(0.204)Y(0.078)T(0.697)PPES(0.022)PVPSYASSTPLHVPVPR 82.216 0.00021013 37578000 38252 56501 46401.5 64012.6 56687 63643.1 62586 42183.7 50639.1 47497.5 TRUE FALSE 41180.60253 53695.2425 47948.50285 58782.56581 54461.18355 66065.08277 54368.38302 47697.25443 55043.59738 45947.66046 0.896250258 1.168617552 1.043546121 1.279337516 1.185287412 1.437833441 1.183267711 1.038077977 1.197963005 1 15.48770378 -4.111224664 1.227732427 1.190994982 2.48E-10 0.300109379 0.122621982 8.184326649 3.26176134 0.036844995 18.50243202 7.74E-05 4.111224664 -1.190994982 IT(ph)ESSLVEITEHK ddPTM_A459_MK2206_30min_R1 1 ITESSLVEITEHK 13 0 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 IT(0.587)ES(0.397)S(0.016)LVEITEHK 174.95 0.00014942 7361200 4896.5 5176.1 4281.8 3415.3 4014.6 4357.4 4741.3 3925.3 5514.9 6792.6 TRUE FALSE 4480.026962 4839.134949 3991.163346 3678.346998 3854.689981 4604.112222 4425.016528 3890.981516 6088.19359 7634.11857 0.586842727 0.633882603 0.522806046 0.481829954 0.504929278 0.603096766 0.579636862 0.509683139 0.797497908 1 12.89824588 -8.486166592 3.072817011 0.998396976 0.553301786 0.903458388 0.047430124 0.067437391 1.445831473 0.049810918 0.01328962 3.26E-09 8.486166592 -0.44509519 IT(ph)HSPDSVK ddPTM_A459_MK2206_30min_R2 1 ITHSPDSVK 9 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 IT(0.707)HS(0.292)PDSVK 117.52 0.017553 8690600 48705 62201 59470 62163 61747 65064 73577 48708 52658 67443 TRUE FALSE 52433.89225 59112.18879 61452.70012 57084.08405 59322.50253 67540.05611 63916.25152 55074.30284 57238.09766 65242.34043 0.803678898 0.906040286 0.941914403 0.874954572 0.909263864 1.035218168 0.979674412 0.844149711 0.877315211 1 15.99352092 -4.760453754 3.031408878 0.929648282 0.779666311 0.315724805 0.056761481 0.554865141 7.12864489 0.015500983 0.209142319 1.74E-05 4.760453754 -0.149981971 IT(ph)KPGSIDSNNQLFAPGGR ddPTM_A459_MK2206_30min_R2 1 ITKPGSIDSNNQLFAPGGR 19 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 IT(0.984)KPGS(0.016)IDSNNQLFAPGGR 71.263 0.020285 10701000 20160 22004 21511 21172 16997 19714 22841 16743 15931 15158 TRUE FALSE 21703.4651 20911.31336 22228.166 19442.17987 16329.61238 20464.23008 19841.94926 18931.36759 17316.64958 14663.3957 1.480111806 1.426089412 1.515894848 1.325898876 1.113631024 1.395599662 1.35316196 1.291062996 1.180944028 1 13.83993162 -9.032493425 0.047667261 1.22E-10 2.360975527 0.66139457 0.091247551 68.66466487 1.388969051 38.02374604 30.00276174 9.28E-10 9.032493425 2.360975527 IT(ph)PDGITK ddPTM_A459_MK2206_30min_R2 1 ITPDGITK 8 0 Q14694;Q14694-3;Q14694-2;H3BQC6 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 IT(1)PDGITK 102.06 0.038653 21898000 320330 247660 241350 291830 238430 231070 325150 253090 210400 284090 TRUE FALSE 344854.7111 235361.5645 249396.4885 267986.5555 229068.0402 239863.5308 282457.4144 286169.732 228700.2117 274820.1666 1.25483772 0.856420282 0.907489766 0.975134244 0.833519763 0.872801781 1.027789983 1.041298153 0.83218133 1 18.06812835 -3.075439787 8.803462379 0.953302025 1.030493673 0 0.124038717 0 0 0.027376812 0 0.000840544 3.075439787 0.077191649 IT(ph)PEPAVSNTEEPSTTSTASNYPDVLTRPSLHR ddPTM_A459_MK2206_30min_R1 1 ITPEPAVSNTEEPSTTSTASNYPDVLTRPSLHR 33 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IT(0.934)PEPAVS(0.028)NT(0.036)EEPS(0.002)T(0.001)TSTASNYPDVLTRPSLHR 65.223 0.00010943 17060000 1797.1 1259.3 1070.9 734.88 2021.5 2069 2149 1398.8 1225.2 1612.1 TRUE FALSE 1644.247208 1177.319341 998.2102917 791.4805849 1940.979374 2186.144992 2005.644131 1386.570439 1352.563924 1811.819119 0.907511788 0.649799601 0.550943679 0.436843047 1.071287611 1.206602232 1.106978125 0.765291869 0.746522603 1 10.82322322 -6.272655327 24.99114773 0.988445987 0.631145541 0.491451994 0.172590573 679.0951734 1513143.21 0.059374891 0.067932832 5.34E-07 6.272655327 -0.357300446 IT(ph)PEPAVSNTEEPSTTSTASNYPDVLTRPSLHR ddPTM_A459_MK2206_30min_R2 2 ITPEPAVSNTEEPSTTSTASNYPDVLTRPSLHR 33 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IT(0.993)PEPAVS(0.005)NT(0.002)EEPSTTSTASNYPDVLTRPSLHR;IT(0.953)PEPAVS(0.035)NT(0.006)EEPS(0.002)T(0.001)T(0.001)STASNYPDVLTRPSLHR 57.711 0.00053743 39532000 31409 58569 41245 70767 68102 64001 74996 46092 52225 53593 TRUE FALSE 33813.69719 55660.54863 42620.08771 64985.10973 65427.97329 66436.6029 65148.93511 52116.38266 56767.4361 51844.2648 0.652216736 1.07361053 0.822079123 1.253467669 1.262009859 1.281464848 1.256627621 1.005248755 1.09496077 1 15.66189678 -4.331720462 0.895751787 1.164543058 3.57E-15 0.51081921 0.139148629 3.732825538 1.347171882 0.049406397 5.150026144 4.66E-05 4.331720462 -1.164543058 IT(ph)PSYVAFTPEGER ddPTM_A459_MK2206_30min_R2 1 ITPSYVAFTPEGER 14 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 1 IT(0.56)PS(0.44)YVAFTPEGER 184.11 2.13E-14 0 6718 5234.1 6288.4 6852.1 8098.2 4883.3 7572.2 2066.1 5187.7 5002.7 TRUE FALSE 7232.335245 4974.182205 6498.052117 6292.261511 7780.223978 5069.137403 6577.961044 2336.146364 5638.916769 4839.462309 1.494450165 1.027837782 1.342721919 1.300198475 1.607662893 1.047458804 1.359233862 0.482728496 1.165194893 1 12.24063105 -7.727155306 24.99998624 0.86797059 1.302483711 0.420870916 0.230105284 155.7399861 113565.7942 0.101829718 0.058787683 1.87E-08 7.727155306 0.434513121 IT(ph)RTPQASTYSYETSDLCYTAEK ddPTM_A459_MK2206_30min_R1 1 ITRTPQASTYSYETSDLCYTAEK 23 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 IT(0.459)RT(0.36)PQAS(0.085)T(0.085)Y(0.003)S(0.008)YETSDLCYTAEK 99.871 7.04E-05 14112000 3142.8 2503.2 2602.4 2461.8 2606.5 2150.9 1877.5 2532.7 1614.9 1248.2 TRUE FALSE 2875.488356 2340.241225 2425.756339 2651.408263 2502.677586 2272.682099 1752.255401 2510.556871 1782.774634 1402.836439 2.049767368 1.668221012 1.729179732 1.890033783 1.784012388 1.620062065 1.249080329 1.789629069 1.270835704 1 10.4541311 -8.567614438 0.199532644 0.72492138 2.066298664 0.693323127 0.172404795 2.503440296 0.373942746 1.209514976 0.752963195 2.71E-09 8.567614438 1.341377285 IT(ph)RTPQASTYSYETSDLCYTAEK ddPTM_A459_MK2206_30min_R2 2 ITRTPQASTYSYETSDLCYTAEK 23 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 IT(0.527)RT(0.456)PQAS(0.008)T(0.008)YSYETSDLCYTAEK;IT(0.458)RT(0.417)PQAS(0.052)T(0.052)Y(0.006)S(0.007)Y(0.008)ETSDLCYTAEK 120.6 1.47E-05 11092700 31916 56285 40126 48911 55013 50923 50299 29527 40456 38057 TRUE FALSE 34359.5135 53489.96875 41463.78081 44914.81484 52852.9132 52860.91045 43694.68088 33386.28028 43974.78975 36815.20321 0.933296859 1.452931509 1.126267879 1.220007251 1.435627366 1.435844593 1.186865128 0.906861225 1.194473639 1 15.16801404 -7.53799743 13.81624814 1.039730517 1.277895265 0.287284299 0.16393086 1.687924853 1535.185384 0.074768569 0.043442486 2.90E-08 7.53799743 0.238164748 IT(ph)S(ph)LSLPIVS(ph)S(ph)SEANK ddPTM_A459_MK2206_30min_R2 1 ITSLSLPIVSSSEANK 16 0 E7EV53;Q16445 E7EV53 GABRA6 Gamma-aminobutyric acid receptor subunit alpha-6 4 IT(1)S(1)LS(0.092)LPIVS(0.909)S(0.5)S(0.5)EANK 62.165 0.048022 0 10969 11011 11564 13333 11735 12275 13380 11264 13031 17163 TRUE FALSE 11808.79507 10464.20975 11949.53799 12243.65125 11274.22494 12742.13373 11623.18993 12736.24348 14164.41283 16602.97272 0.711245828 0.630261215 0.719722799 0.737437293 0.679048573 0.767460981 0.700066797 0.76710621 0.853125104 1 14.01915395 -8.563295046 0.869806136 1.002268743 0.698953398 0.881793905 0.033991225 0.211699732 0.353157212 0.032732006 0.011511451 2.73E-09 8.563295046 -0.303315345 IT(ph)SFPESEGYSYETSTK ddPTM_A459_MK2206_30min_R1 2 ITSFPESEGYSYETSTK 17 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 IT(0.971)S(0.029)FPESEGYSYETSTK;IT(0.604)S(0.396)FPESEGYSYETSTK 152.94 0.00034695 8701800 3221 3308.1 3152.7 3020.2 3173.6 3229.4 3811.9 3244.2 2707.8 3048.7 TRUE FALSE 2947.037036 3092.742089 2938.703508 3252.816327 3047.188792 3412.245837 3557.615106 3215.836301 2989.2855 3426.395973 0.860098208 0.902622497 0.857666052 0.94934046 0.889327683 0.995870257 1.038296547 0.938547771 0.8724285 1 11.74247617 -6.180099995 1.358725178 0.96532894 0.877046453 0.366496474 0.048577187 0.506751825 1.888815094 0.019291639 0.029303562 6.61E-07 6.180099995 -0.088282487 IT(ph)SPLMEPSSIEK ddPTM_A459_MK2206_30min_R2 2 ITSPLMEPSSIEK 13 0 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 1 IT(0.94)S(0.06)PLMEPSSIEK;IT(0.5)S(0.5)PLMEPSSIEK 174.94 0.00025823 24506000 176427 201144 185533 204151 194683 162458 215778 146223 179230 206824 TRUE FALSE 189934.3868 191155.4815 191718.5776 187471.2103 187038.7672 168640.453 187446.0894 165334.8482 194819.1014 200075.3498 0.949314281 0.955417455 0.958231875 0.937003036 0.934841635 0.842884709 0.936877479 0.826362909 0.973728656 1 17.61018391 -6.536117649 24.83030543 0.904473776 0.949087134 0.070982816 0.050135611 393.435335 737904.4281 0.015343853 0.015351721 2.91E-07 6.536117649 0.044613358 ITAHS(ph)SPPLTK ddPTM_A459_MK2206_30min_R1 1 ITAHSSPPLTK 11 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 ITAHS(0.627)S(0.373)PPLT(0.001)K 76.728 0.033621 20349000 4520.4 4633.2 4751.6 4423.2 4719.7 4335.9 4379.6 4338.9 3734.1 3937.4 TRUE FALSE 4135.916242 4331.577838 4429.074631 4763.87563 4531.704355 4581.394911 4087.444875 4300.965455 4122.273058 4425.194838 0.934629184 0.978844547 1.000876751 1.076534662 1.024068888 1.035297897 0.923675685 0.971926799 0.931546115 1 12.11152526 -7.257719803 24.99732274 0.954447716 1.010503665 0.285490963 0.039828015 432.9071043 2909361.458 0.016626762 0.012367344 5.52E-08 7.257719803 0.056055949 ITAHSS(ph)PPLTK ddPTM_A459_MK2206_30min_R1 1 ITAHSSPPLTK 11 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 ITAHS(0.068)S(0.932)PPLTK 84.734 0.023725 19085000 6513.6 6233 6781.9 5346.4 6275.8 6127.4 6206.1 6366.1 5778.9 5298.2 TRUE FALSE 5959.584116 5827.230567 6321.563523 5758.180654 6025.821597 6474.328093 5792.102393 6310.441859 6379.637335 5954.581015 1.00084021 0.97861303 1.061630282 0.96701693 1.011963996 1.087285247 0.972713677 1.059762533 1.071383078 1 12.53978428 -6.541654517 24.97356035 1.039175507 1.002720337 0.166111456 0.038803876 431.891151 574452.9942 0.012411405 0.012413241 2.87E-07 6.541654517 -0.03645517 ITAHSS(ph)PPLTK ddPTM_A459_MK2206_30min_R2 4 ITAHSSPPLTK 11 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 ITAHS(0.017)S(0.983)PPLTK;ITAHS(0.11)S(0.889)PPLT(0.001)K;ITAHS(0.056)S(0.944)PPLTK;ITAHS(0.057)S(0.942)PPLT(0.001)K 100.11 0.010971 74682000 660274 730980 695490 762430 765100 661150 762680 624533 639040 733490 TRUE FALSE 710825.0851 694680.5961 718677.2895 700137.0301 735058.3297 686310.5265 662539.1999 706161.6074 694622.5441 709556.2814 1.001788165 0.979035229 1.012854524 0.986725153 1.035940839 0.967239026 0.933737347 0.995215779 0.978953414 1 19.4365576 -6.852546587 24.18221743 0.972148698 1.001559365 0.283747538 0.022115185 18.8812904 5003.554572 0.007756781 0.006840838 1.40E-07 6.852546587 0.029410667 ITAVCNFFT(ph)YIR ddPTM_A459_MK2206_30min_R1 1 ITAVCNFFTYIR 12 0 E9PK89;Q8TBN0;Q8TBN0-2 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 1 ITAVCNFFT(0.608)Y(0.392)IR 100.09 0.01867 35705000 4780 4518.8 4215.9 3595.8 4087.3 4062.8 4439.4 3779.2 4441.4 3560.7 TRUE FALSE 4373.435899 4224.625299 3929.736454 3872.749139 3924.494186 4292.832225 4143.255726 3746.158853 4903.099424 4001.826398 1.092859976 1.055674304 0.981985739 0.967745413 0.98067577 1.072718254 1.035341195 0.936112285 1.225215423 1 11.96644287 -8.249041024 24.9995968 1.112607734 1.01544932 0.241307154 0.06895355 919.4453327 1853946.158 0.045755452 0.017015274 5.64E-09 8.249041024 -0.097158414 ITDLYTDLR ddPTM_A459_MK2206_30min_R2 1 ITDLYTDLR 9 0 A0A087WUZ3;Q01082;Q01082-2;F8W6C1;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 0 133.86 0.041843 1655500 11225 11608 11254 13249 11782 10373 13885 10134 8382.4 12145 FALSE TRUE 12084.39463 11031.5636 11629.20274 12166.51432 11319.37948 10767.75178 12061.88282 11458.5486 9111.486 11748.70964 1.028572073 0.938959591 0.989828083 1.03556175 0.96345725 0.916505055 1.026655964 0.97530273 0.775530784 1 13.52021469 -8.041447066 24.98646622 0.883649093 0.983746081 0.278617358 0.062240185 583.4257107 351716.1209 0.039011222 0.014748064 9.09E-09 8.041447066 0.100096988 ITEFCHR ddPTM_A459_MK2206_30min_R1 4 ITEFCHR 7 0 P07237;H7BZ94;I3L398;H0Y3Z3 P07237 P4HB Protein disulfide-isomerase 0 ;;; 183.89 7.00E-18 30779000 25709.8 24886.6 26038.7 22316.3 27980.7 23106.4 25380.2 24303.2 21047 20130.4 FALSE TRUE 23523.0465 23266.47782 24271.26559 24035.10529 26866.16947 24414.6644 23687.13317 24090.71968 23234.91097 22624.30593 1.039724559 1.028384159 1.07279603 1.062357686 1.187491433 1.079134294 1.046977231 1.064815856 1.026988896 1 14.46558591 -8.326795026 1.294429898 1.000512255 1.077215331 0.266685675 0.041135545 0.634844642 2.173815215 0.042351114 0.013280328 4.71E-09 8.326795026 0.076703077 ITEFCHR ddPTM_A459_MK2206_30min_R2 5 ITEFCHR 7 0 P07237;H7BZ94;I3L398;H0Y3Z3 P07237 P4HB Protein disulfide-isomerase 0 ;;;; 177.71 1.74E-06 61237600 164798 201336 174871 203870 198053 205310 185072 159479 173851 172491 FALSE TRUE 177415.0616 191337.947 180701.1119 187213.1689 190276.4441 213123.2159 160771.8241 180323.4529 188972.2457 166862.6328 1.063240215 1.14667942 1.082933362 1.121959816 1.140317882 1.277237524 0.963498067 1.080670069 1.132501882 1 17.34830139 -9.220502997 0.524774531 0.994688879 1.122753024 0.167123157 0.074922256 4.80392899 2.03905403 0.151162657 0.037089058 6.02E-10 9.220502997 0.128064145 ITES(ph)EEVVSR ddPTM_A459_MK2206_30min_R2 2 ITESEEVVSR 10 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 IT(0.009)ES(0.991)EEVVSR;IT(0.002)ES(0.998)EEVVSR 124.39 0.0038579 14081900 76066 71155 74649 65091 61911 60355 68739 65571 55491 75855 TRUE FALSE 81889.67144 67621.54617 77137.7604 59772.85708 59480.06306 62651.85182 59713.48673 74141.35484 60317.50688 73379.85756 1.115969343 0.921527357 1.05121164 0.814567636 0.810577521 0.853801764 0.813758553 1.01037747 0.821989969 1 16.16309648 -4.392647391 0.912567054 0.876813154 1.387719882 0.375432178 0.086043092 4.186232475 1.69050988 0.028928852 2.515792487 4.05E-05 4.392647391 0.510906728 ITES(ph)SLVEITEHK ddPTM_A459_MK2206_30min_R1 1 ITESSLVEITEHK 13 0 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 IT(0.102)ES(0.555)S(0.344)LVEITEHK 161.49 0.00024054 4744800 3714.6 3868.3 3688.9 2156 2982.9 3197.4 4142.3 2501.6 4407.7 4842.8 TRUE FALSE 3398.653764 3616.472967 3438.507746 2322.055494 2864.084777 3378.434025 3865.974725 2479.728775 4865.896188 5442.762625 0.62443542 0.664455391 0.631757801 0.426631778 0.526218939 0.620720442 0.710296405 0.455601125 0.8940122 1 12.4101234 -8.410911802 4.739221275 0.995564414 0.586196359 0.746365716 0.085829108 0.105789621 3.413896509 0.085781122 0.022389239 3.88E-09 8.410911802 -0.409368055 ITHQEVDSR ddPTM_A459_MK2206_30min_R2 1 ITHQEVDSR 9 0 D6RJA0;Q8WTS6 D6RJA0 SETD7 Histone-lysine N-methyltransferase SETD7 0 95.523 0.031332 1362500 7251.2 11228 9278 9968.8 11424 11812 10572 10075 10693 7918.5 FALSE TRUE 7806.357447 10670.43385 9587.323889 9154.317151 10975.43636 12261.51394 9183.883701 11391.83709 11623.05781 7660.119993 1.019090752 1.392985209 1.251589257 1.195061847 1.432802145 1.60069476 1.19892165 1.487161703 1.517346702 1 12.90315128 -4.757618276 24.96265482 1.356122549 1.01909026 0.235354988 0.172806783 155.9222372 1018466.199 0.041885129 0.307078091 1.75E-05 4.757618276 -0.337032289 ITHS(ph)PDSVK ddPTM_A459_MK2206_30min_R1 2 ITHSPDSVK 9 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 IT(0.025)HS(0.975)PDSVK;IT(0.018)HS(0.749)PDS(0.233)VK 102.53 0.016048 21750000 10395.3 8795.1 9899.2 7625.2 9942.8 10029.9 9931.8 9714.6 6977.3 7775.4 TRUE FALSE 9511.125147 8222.537391 9227.269885 8212.494225 9546.757222 10597.78427 9269.267744 9629.666276 7702.615304 8738.675253 1.088394393 0.940936372 1.055911751 0.939787094 1.092471907 1.212744949 1.060717726 1.101959507 0.881439701 1 13.09319887 -4.448173565 21.97344004 1.039730308 3.220289008 0.026928556 0.091473399 1869.834241 592921.363 0.022645453 15745.12214 3.56E-05 4.448173565 2.1805587 ITHS(ph)PDSVK ddPTM_A459_MK2206_30min_R2 2 ITHSPDSVK 9 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 IT(0.177)HS(0.823)PDSVK;IT(0.022)HS(0.976)PDS(0.002)VK 110.84 0.01062 14660700 87677 123815 109565 136588 131818 110930 136522 107155 107932 120306 TRUE FALSE 94389.61853 117666.5271 113217.8424 125428.3235 126642.163 115151.5189 118596.4974 121160.5264 117319.7303 116380.4251 0.811043769 1.011050845 0.972825476 1.07774416 1.088174089 0.989440611 1.019041624 1.04107307 1.00807099 1 16.8284889 -4.149407386 1.516271767 1.030110422 8.27E-09 0.762782121 0.035315667 3.178966629 1.726233721 0.010090328 7.880801234 7.09E-05 4.149407386 -1.030110414 ITHS(ph)PTVSQVTER ddPTM_A459_MK2206_30min_R1 2 ITHSPTVSQVTER 13 0 P16157-14;H0YBS0;P16157-15;P16157-12;P16157-21;P16157;P16157-3;P16157-16;P16157-5;P16157-8;P16157-10;P16157-13;P16157-4;P16157-7;P16157-6;P16157-9;P16157-11;A0A2R8Y4B0 P16157-14 ANK1 Ankyrin-1 1 IT(0.003)HS(0.434)PT(0.434)VS(0.129)QVTER;IT(0.026)HS(0.848)PT(0.122)VS(0.004)QVTER 157.37 0.00036494 12769700 2325.9 1940.18 2017.11 1782.83 2356.3 2100.57 2463.4 2494.3 1747.81 1211.17 TRUE FALSE 2128.069991 1813.873929 1880.194193 1920.143876 2262.443581 2219.502458 2299.071081 2472.492598 1929.501104 1361.218883 1.563356207 1.332536561 1.381257795 1.410606258 1.662071845 1.630525763 1.688979714 1.816381354 1.417480412 1 10.41068335 -4.446066072 21.86639633 1.51485985 3.882568203 0 0.221992442 4214.928342 1336707.217 0.053645517 56128.02573 3.58E-05 4.446066072 2.367708353 ITHS(ph)PTVSQVTER ddPTM_A459_MK2206_30min_R2 1 ITHSPTVSQVTER 13 0 P16157-14;H0YBS0;P16157-15;P16157-12;P16157-21;P16157;P16157-3;P16157-16;P16157-5;P16157-8;P16157-10;P16157-13;P16157-4;P16157-7;P16157-6;P16157-9;P16157-11;A0A2R8Y4B0 P16157-14 ANK1 Ankyrin-1 1 ITHS(1)PTVSQVTER 149.59 0.00034093 5742200 22432 21850 20329 17870 30739 24575 24445 22988 20128 20232 TRUE FALSE 24149.41117 20764.96077 21006.75871 16409.96384 29532.03241 25510.21885 21235.34214 25992.61053 21878.69706 19571.8315 1.233886117 1.060961555 1.07331594 0.838448044 1.508904898 1.303415005 1.084995144 1.328062248 1.117866617 1 14.25649115 -4.420293187 18.86906985 1.158232157 7.762844343 0.017051745 0.179960095 749.8601457 138010.7886 0.044458067 130.3156223 3.80E-05 4.420293187 6.604612187 ITITNDK ddPTM_A459_MK2206_30min_R2 1 ITITNDK 7 0 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PM13;E9PS65;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;P17066;Q53FA3;P34931 P11142;P54652;A0A0G2JIW1;P17066;Q53FA3 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA6;HSPA1L Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Heat shock 70 kDa protein 1-like 0 134.81 0.038131 15019000 67479 73171 59901 78728 65475 56733 77594 48803 67598 80536 FALSE TRUE 72645.24412 69537.43454 61898.06944 72295.67056 62904.12251 58892.01407 67405.81459 55181.71967 73477.55185 77908.11692 0.932447696 0.892556993 0.794500906 0.927960698 0.807414234 0.755916282 0.865196301 0.708292304 0.943130893 1 16.24948602 -5.036080439 5.186778356 0.83828846 0.924782619 0.073363594 0.085176277 0.347505973 24.71043386 0.020385222 0.063880107 9.20E-06 5.036080439 0.086494159 ITKPGS(ph)IDSNNQLFAPGGR ddPTM_A459_MK2206_30min_R2 1 ITKPGSIDSNNQLFAPGGR 19 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 IT(0.315)KPGS(0.657)IDS(0.029)NNQLFAPGGR 83.115 0.0026032 11760000 50084 65109 56732 60727 44450 45405 62662 36663 41919 36446 TRUE FALSE 53918.46955 61875.78174 58623.41656 55765.40984 42704.66966 47132.91909 54434.40413 41454.97998 45565.03885 35256.77 1.529308259 1.755004265 1.662756303 1.581693667 1.211247362 1.336847337 1.54394189 1.17580198 1.292377006 1 15.10561269 -6.311253265 0.178461574 0.890439679 2.067340638 0.671658428 0.131442391 5.586690085 0.356021483 0.55684339 1.720948257 4.88E-07 6.311253265 1.176900959 ITKPGSIDSNNQLFAPGGRLS(ph)WGK ddPTM_A459_MK2206_30min_R1 2 ITKPGSIDSNNQLFAPGGRLSWGK 24 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 ITKPGSIDSNNQLFAPGGRLS(1)WGK;ITKPGSIDSNNQLFAPGGRLS(1)WGK 84.214 4.71E-05 79887000 10009.1 11079.8 11927.9 10537.7 11596.3 8394.5 8270.5 8621.9 6200.1 4767.4 TRUE FALSE 9157.773485 10358.50301 11118.26738 11349.31548 11134.39482 8869.789336 7718.790035 8546.519637 6844.622582 5358.021504 1.709170722 1.933270144 2.07506957 2.118191476 2.078079531 1.655422497 1.440604527 1.595088715 1.277453362 1 12.38748466 -7.77747721 0.710673767 1.051861286 1.997943145 0.812696585 0.153650824 0.305669921 0.301718655 0.157425817 0.076569425 1.67E-08 7.77747721 0.946081859 ITKPGSIDSNNQLFAPGGRLS(ph)WGK ddPTM_A459_MK2206_30min_R2 2 ITKPGSIDSNNQLFAPGGRLSWGK 24 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 ITKPGSIDSNNQLFAPGGRLS(1)WGK;ITKPGSIDSNNQLFAPGGRLS(1)WGK 87.419 3.36E-05 9051500 36124 55406 48030 59161 61698 46754 42927 33503 35446 33743 TRUE FALSE 38889.68121 52654.61861 49631.29623 54327.35705 59275.42651 48533.25623 37290.63334 37881.95713 38529.02901 32641.96867 1.191401217 1.613095679 1.520474967 1.664340702 1.815926824 1.486836064 1.142413735 1.16052918 1.18035249 1 14.99444045 -7.214612325 4.084104719 1.130587794 1.573643353 0.648190593 0.154755477 0.145873158 5.242375555 0.064759525 0.047704521 6.10E-08 7.214612325 0.443055559 ITLPVDFVTADKFDENAK ddPTM_A459_MK2206_30min_R1 2 ITLPVDFVTADKFDENAK 18 1 P00558-2;P00558 P00558-2 PGK1 Phosphoglycerate kinase 1 0 ; 195.6 8.05E-10 38399000 8033.2 7809 8184 8076.6 7994.9 7087.5 6676.4 7175.1 6128.8 6844.4 FALSE TRUE 7349.934156 7300.632681 7628.492882 8698.661131 7676.446204 7488.788125 6231.029538 7112.368857 6765.910692 7692.335945 0.955487931 0.949078763 0.991700432 1.130821794 0.997934341 0.973538881 0.810030865 0.924604556 0.87956516 1 12.90920606 -7.037139261 9.973309295 0.89640686 1.005949839 0.358175103 0.063962871 0.639620265 168.6838001 0.024964902 0.019532394 9.18E-08 7.037139261 0.109542979 ITPGNYGNT(ph)PR ddPTM_A459_MK2206_30min_R1 1 ITPGNYGNTPR 11 0 Q5VYS8-5;Q5VYS8-3;Q5VYS8-2;Q5VYS8-4;Q5VYS8-6;Q5VYS8 Q5VYS8-5 ZCCHC6 Terminal uridylyltransferase 7 1 ITPGNYGNT(1)PR 101.38 0.025075 0 1656.2 1509.1 1316.7 1221.3 1550.8 1461.5 1485 1557 1303.5 1089.7 TRUE FALSE 1515.331493 1410.857316 1227.326073 1315.364738 1489.028352 1544.248867 1385.93836 1543.387313 1439.00349 1224.700263 1.237308049 1.152002134 1.002144043 1.07402993 1.215830842 1.260919846 1.13165515 1.260216365 1.174984225 1 10.25821299 -4.764143312 7.459758357 1.148654113 1.238696416 0.089335548 0.089263668 0.288139009 114.2228774 0.023373275 0.132991936 1.72E-05 4.764143312 0.090042303 ITPHT(ph)SPAPR ddPTM_A459_MK2206_30min_R1 1 ITPHTSPAPR 10 0 A0A0C4DFZ9;Q58A45-2;Q58A45-4;Q58A45-3;Q58A45 A0A0C4DFZ9 PAN3 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 1 ITPHT(0.779)S(0.221)PAPR 131.79 0.0034561 13066000 913.76 997.18 786.9 1042.4 838.1 978.86 1302.7 980.32 1025.8 855.45 TRUE FALSE 836.0399137 932.2634008 733.4874204 1122.685829 804.7167023 1034.282207 1215.79926 971.7491656 1132.435581 961.4296043 0.869579957 0.969663714 0.762913288 1.167725462 0.837000128 1.075775286 1.264574395 1.010733559 1.177866352 1 9.909037417 -6.914855889 6.60217521 1.121845337 0.929799549 0.364109944 0.122110207 0.229485033 14.5887954 0.041135171 0.036235077 1.22E-07 6.914855889 -0.192045788 ITPHT(ph)SPAPR ddPTM_A459_MK2206_30min_R2 2 ITPHTSPAPR 10 0 A0A0C4DFZ9;Q58A45-2;Q58A45-4;Q58A45-3;Q58A45 A0A0C4DFZ9 PAN3 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 1 IT(0.001)PHT(0.5)S(0.5)PAPR;ITPHT(0.5)S(0.5)PAPR 103.14 0.019718 20094800 31887 39078 33876 40402 34726 41354 41847 31916 38740 40635 TRUE FALSE 34328.29324 37137.44334 35005.40893 37101.02736 33362.48276 42927.75545 36352.43863 36087.53078 42109.53517 39309.08328 0.873291626 0.944754755 0.890517051 0.943828354 0.848721974 1.092056895 0.924784696 0.918045596 1.071241852 1 15.2625751 -6.741545047 24.99987497 0.991326145 0.904580095 0.42396193 0.058187266 274.3028357 344697.2722 0.018784673 0.01876157 1.81E-07 6.741545047 -0.086746049 ITPLSLQT(ph)QGSSHETLNIVEEK ddPTM_A459_MK2206_30min_R2 1 ITPLSLQTQGSSHETLNIVEEK 22 0 O43491;E9PMV8;Q6R5J7 O43491 EPB41L2 Band 4.1-like protein 2 1 IT(0.011)PLS(0.074)LQT(0.427)QGS(0.126)S(0.325)HET(0.037)LNIVEEK 53.454 0.042703 6478000 12672 20555 14970 20874 22459 23176 28019 19631 25101 20806 TRUE FALSE 13642.17806 19534.26859 15469.09233 19168.52743 21577.14681 24057.97892 24340.07164 22196.8391 27284.23961 20127.10192 0.67780141 0.970545519 0.768570278 0.952373943 1.072044395 1.195302682 1.209318248 1.102833343 1.355597031 1 14.29685183 -6.22629022 1.66494392 1.18243769 0.816741369 0.680947055 0.109442642 0.206081754 1.131548849 0.036599411 0.050549955 5.94E-07 6.22629022 -0.365696321 ITPLSLQTQGSS(ph)HETLNIVEEK ddPTM_A459_MK2206_30min_R1 2 ITPLSLQTQGSSHETLNIVEEK 22 0 O43491;E9PMV8;Q6R5J7 O43491 EPB41L2 Band 4.1-like protein 2 1 ITPLSLQTQGS(0.003)S(0.978)HET(0.019)LNIVEEK;ITPLSLQTQGS(0.027)S(0.967)HET(0.007)LNIVEEK 171.9 2.99E-12 49480000 7321.7 4859.4 5993.8 4685.5 8605.8 7344 8299.2 7820.3 6017.3 5872.6 TRUE FALSE 6698.950967 4543.052177 5586.957556 5046.378022 8263.012763 7759.810933 7745.575511 7751.927942 6642.819868 6600.142024 1.01497073 0.688326427 0.846490505 0.764586278 1.25194469 1.17570363 1.173546794 1.174509263 1.006466201 1 12.68828135 -6.255680135 24.99967909 1.143513573 0.819852756 0.657458337 0.106380705 264.3013537 1147276.114 0.030456142 0.038241113 5.55E-07 6.255680135 -0.323660818 ITPLSLQTQGSS(ph)HETLNIVEEK ddPTM_A459_MK2206_30min_R2 2 ITPLSLQTQGSSHETLNIVEEK 22 0 O43491;E9PMV8;Q6R5J7 O43491 EPB41L2 Band 4.1-like protein 2 1 ITPLSLQTQGS(0.076)S(0.909)HET(0.014)LNIVEEK;IT(0.001)PLS(0.014)LQT(0.258)QGS(0.154)S(0.568)HET(0.005)LNIVEEK 96.181 0.00013458 16189800 35090 52873 46873 63070 63706 59787 67976 52726 61043 53591 TRUE FALSE 37776.51738 50247.4037 48435.72243 57916.97925 61204.58234 62062.23618 59050.66955 59617.46924 66352.4098 51842.33006 0.728680932 0.969235057 0.934289072 1.117175466 1.180590885 1.19713439 1.139043509 1.149976654 1.279888649 1 15.66184294 -4.903308233 0.785849581 1.172015664 0.559892807 0.7423227 0.077949507 1.077856456 0.573761441 0.029622982 0.561588177 1.25E-05 4.903308233 -0.612122857 ITPPAAKPGS(ph)PQAK ddPTM_A459_MK2206_30min_R1 1 ITPPAAKPGSPQAK 14 1 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 IT(0.002)PPAAKPGS(0.998)PQAK 145.79 0.0024217 73183000 3299.8 3214 3707.3 3024.8 2634.5 2129.4 2921.5 3072.3 2661.5 2113.1 TRUE FALSE 3019.134682 3004.768016 3455.658805 3257.77062 2529.562286 2249.964788 2726.612066 3045.439205 2938.172449 2374.886781 1.271275206 1.265225795 1.455083599 1.371758286 1.065129633 0.947398758 1.148101917 1.282351323 1.23718422 1 11.21364302 -6.257105 24.98954084 1.120917475 1.343595584 0.523375111 0.10618601 346.8335976 1999642.101 0.035422653 0.044090541 5.53E-07 6.257105 0.222678109 ITPPAAKPGS(ph)PQAK ddPTM_A459_MK2206_30min_R2 1 ITPPAAKPGSPQAK 14 1 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 ITPPAAKPGS(1)PQAK 71.929 0.029325 387280000 354820 334770 384850 378510 394010 274090 414020 302300 314730 380480 TRUE FALSE 381985.292 318145.8086 397680.7069 347584.5222 378539.1877 284520.687 359658.6767 341811.648 342104.6465 368064.9688 1.037820288 0.864374052 1.080463344 0.944356436 1.028457527 0.773017568 0.977160847 0.928672047 0.929468098 1 18.48960092 ITPS(ph)YVAFTPEGER ddPTM_A459_MK2206_30min_R1 2 ITPSYVAFTPEGER 14 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 1 IT(0.012)PS(0.988)YVAFTPEGER;IT(0.211)PS(0.789)YVAFTPEGER 145.49 0.00051594 9258100 1978.95 2639.8 2501.9 1908.55 1912.9 1755.05 1939.74 1522.35 2054.14 2083.08 TRUE FALSE 1810.629911 2467.94854 2332.077999 2055.546852 1836.705142 1854.419414 1810.343484 1509.040254 2267.675204 2341.147677 0.773394147 1.054161839 0.996125969 0.878008197 0.784531946 0.792098436 0.773271802 0.64457286 0.968616899 1 11.19300023 -6.00944454 4.23571985 0.805957426 0.951907581 0.144032512 0.116759904 0.294256548 12.6737697 0.033230974 0.047216348 9.78E-07 6.00944454 0.145950156 ITPS(ph)YVAFTPEGER ddPTM_A459_MK2206_30min_R2 2 ITPSYVAFTPEGER 14 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 1 IT(0.037)PS(0.962)YVAFTPEGER;IT(0.064)PS(0.936)YVAFTPEGER 167.03 0.00022203 5090400 12485.4 11279.3 10404.2 13637.8 15749.8 13012.7 13297.8 7871.8 8576.9 9036.4 TRUE FALSE 13441.29182 10719.18636 10751.07084 12523.54811 15131.38372 13507.90742 11551.78289 8900.671288 9322.903259 8741.543008 1.537633781 1.226235043 1.229882508 1.432647314 1.730974006 1.545254357 1.321480987 1.018203683 1.06650545 1 13.09367224 -7.655956665 3.674771301 1.028868656 1.441871137 0.640599142 0.141044179 0.172628424 4.436471853 0.084578485 0.044836345 2.21E-08 7.655956665 0.413002481 ITRT(ph)PQASTYSYETSDLCYTAEK ddPTM_A459_MK2206_30min_R1 1 ITRTPQASTYSYETSDLCYTAEK 23 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 IT(0.099)RT(0.759)PQAS(0.044)T(0.044)Y(0.048)S(0.005)Y(0.001)ETSDLCYTAEK 99.971 6.95E-05 12435000 3835.5 3525.7 3227.1 3072.9 3459.6 2937.3 2983.1 2787.9 2433.9 2053.9 TRUE FALSE 3509.270584 3296.176289 3008.053443 3309.57529 3321.796806 3103.607388 2784.102842 2763.525684 2686.912615 2308.352638 1.520248911 1.427934465 1.303116947 1.433739038 1.439033513 1.344511812 1.206099448 1.19718523 1.16399573 1 11.17264792 -7.803269674 0.528040436 1.001947507 1.449946557 0.867840591 0.055353382 0.310318113 0.197284291 0.060479171 0.038186608 1.57E-08 7.803269674 0.44799905 ITS(ph)EAEDLVANFFPK ddPTM_A459_MK2206_30min_R1 2 ITSEAEDLVANFFPK 15 0 A0A087WTV2;K9J957;P61289;P61289-3;P61289-2;B7Z8D3;K7ENH2 A0A087WTV2 PSME3 Proteasome activator complex subunit 3 1 IT(0.171)S(0.829)EAEDLVANFFPK;IT(0.273)S(0.727)EAEDLVANFFPK 226.7 2.19E-51 2943400 4730.9 4124 4084.9 3266 4138.4 3701.7 4132.7 4374.3 3759 3505.7 TRUE FALSE 4328.512112 3855.52685 3807.628369 3517.547886 3973.558765 3911.287055 3857.015124 4336.055956 4149.761502 3940.012583 1.098603627 0.978556989 0.966400053 0.8927758 1.008514232 0.99270928 0.978934722 1.100518302 1.053235596 1 11.94398452 -7.741776919 24.97750889 1.057657713 0.984170771 0.227600139 0.052601483 298.7684783 379530.8642 0.025218875 0.014534042 1.81E-08 7.741776919 -0.073486942 ITS(ph)EAEDLVANFFPK ddPTM_A459_MK2206_30min_R2 1 ITSEAEDLVANFFPK 15 0 A0A087WTV2;K9J957;P61289;P61289-3;P61289-2;B7Z8D3;K7ENH2 A0A087WTV2 PSME3 Proteasome activator complex subunit 3 1 IT(0.05)S(0.95)EAEDLVANFFPK 121.42 0.0016774 15114000 4456.9 3943.5 3418.7 4288.7 5107.9 4405 6205.1 4144.4 4380.8 3840.6 TRUE FALSE 4798.123691 3747.671524 3532.677752 3938.299491 4907.338181 4572.635362 5390.362916 4686.08731 4761.834065 3715.281537 1.291456285 1.008718044 0.95085062 1.060027202 1.320852305 1.230764161 1.450862569 1.261300729 1.28168862 1 11.85925582 -6.255043928 24.32927169 1.278966632 1.06376606 0.292223136 0.133942145 381.5555175 1451493.426 0.038890062 0.048946585 5.56E-07 6.255043928 -0.215200572 ITS(ph)FPESEGYSYETSTK ddPTM_A459_MK2206_30min_R1 1 ITSFPESEGYSYETSTK 17 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 IT(0.118)S(0.706)FPES(0.175)EGYSYETSTK 120.77 0.0014538 5163900 1224.6 1445 1435.6 1284.6 1574.7 1435.2 1433.6 1389.1 1292.3 1512.6 TRUE FALSE 1120.441339 1350.930237 1338.155472 1383.540115 1511.976365 1516.459784 1337.96716 1376.955245 1426.63921 1699.992308 0.659086123 0.794668441 0.787153839 0.813850809 0.889401886 0.892039203 0.787043067 0.809977339 0.839203332 1 10.7313125 -9.385492577 0.03007242 1.805336974 3.10E-20 0.612031478 0.05251686 261.6260016 2.595944098 85.4537164 70.02250247 4.12E-10 9.385492577 -1.805336974 ITS(ph)PLMEPSSIEK ddPTM_A459_MK2206_30min_R1 3 ITSPLMEPSSIEK 13 0 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 1 IT(0.045)S(0.954)PLMEPSSIEK;IT(0.005)S(0.995)PLMEPSSIEK;IT(0.063)S(0.937)PLMEPSSIEK 186.13 0.00013088 42504000 11823.2 11698.1 13246.6 10446.7 11209.8 10712.8 11389.8 11497.1 10858.5 10635.3 TRUE FALSE 10817.57475 10936.55156 12347.4577 11251.30664 10763.28993 11319.34948 10630.00722 11396.58207 11987.27993 11952.88126 0.905018173 0.914971991 1.03301099 0.941304979 0.900476605 0.946997568 0.889325929 0.953458988 1.002877856 1 13.5450708 -8.172212401 4.068607091 1.001782207 0.93503575 0.332530672 0.038015796 0.282835363 8.171695591 0.030776234 0.010341913 6.73E-09 8.172212401 -0.066746457 ITS(ph)PLMEPSSIEK ddPTM_A459_MK2206_30min_R2 1 ITSPLMEPSSIEK 13 0 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 1 IT(0.034)S(0.966)PLMEPSSIEK 115.24 0.015336 3980400 35414 35962 36489 35410 40523 32541 32878 30477 30371 37360 TRUE FALSE 38125.32307 34176.17937 37705.52505 32516.88973 38931.86341 33779.37056 28561.07911 34460.44854 33012.61468 36140.94626 1.054906609 0.945635987 1.04329103 0.89972436 1.077223134 0.934656506 0.790269267 0.953501557 0.913440795 1 15.14134666 -6.987424777 24.66694654 0.903575866 0.998143739 0.270884652 0.069773334 238.6694122 468160.0137 0.023298857 0.02053385 1.03E-07 6.987424777 0.094567873 ITSFPES(ph)EGYSYETSTK ddPTM_A459_MK2206_30min_R1 1 ITSFPESEGYSYETSTK 17 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 IT(0.001)S(0.002)FPES(0.665)EGY(0.002)S(0.328)YET(0.002)STK 117.13 0.0015951 3397500 962.05 715.62 892.73 751.25 738.57 537.11 739.04 767.27 676.91 842.95 TRUE FALSE 880.2225956 669.0330079 832.1339749 809.1114052 709.151193 567.520704 689.7399901 760.5618393 747.2772168 947.3810099 0.929111505 0.706192124 0.878351968 0.85405069 0.748538535 0.599041672 0.728049204 0.802804607 0.788782136 1 9.887800943 -9.101919538 1.774489756 0.999984299 0.775334618 0.348456778 0.089430333 6.770263242 19.43581205 0.090311812 0.025314908 7.91E-10 9.101919538 -0.224649681 ITSFVIPEPSPT(ph)SQTIQEGSR ddPTM_A459_MK2206_30min_R2 1 ITSFVIPEPSPTSQTIQEGSR 21 0 P41214-2;P41214 P41214-2 EIF2D Eukaryotic translation initiation factor 2D 1 ITSFVIPEPS(0.305)PT(0.449)S(0.096)QT(0.142)IQEGS(0.007)R 103.17 0.0016741 0 12132 13216 10666 11589 15952 13248 16683 14814 10481 15034 TRUE FALSE 13060.83525 12559.71266 11021.59912 10642.14163 15325.64433 13752.16192 14492.50206 16750.24066 11392.61843 14543.44181 0.898056692 0.863599746 0.757839806 0.731748493 1.053783865 0.945591979 0.996497407 1.151738418 0.783350914 1 13.82808111 -6.265531407 24.99934534 0.99433578 0.81251241 0.438274077 0.097301928 327.3765602 2000033.089 0.029358404 0.034487851 5.43E-07 6.265531407 -0.181823369 ITSLSS(ph)SLDTSLDFSK ddPTM_A459_MK2206_30min_R1 1 ITSLSSSLDTSLDFSK 16 0 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 ITSLS(0.001)S(0.5)S(0.5)LDTSLDFSK 296.13 1.55E-75 6388100 2500.7 2752 2899.7 2757.3 3051.8 3498.7 4542.5 4384.6 4752.6 5487.1 TRUE FALSE 2288.002333 2572.8443 2702.876443 2969.667724 2930.240344 3696.79337 4239.478113 4346.265904 5246.649777 6166.883373 0.371014367 0.417203333 0.438288886 0.481550816 0.475157412 0.59945894 0.687458779 0.704775109 0.850778174 1 12.59032585 -7.682260759 0.448266956 1.014373387 0.368214859 0.98475056 0.024169291 0.106492388 0.052835315 0.026008776 0.020843682 2.08E-08 7.682260759 -0.646158528 down ITSVIPS(ph)PPPPPPLPPPQR ddPTM_A459_MK2206_30min_R1 1 ITSVIPSPPPPPPLPPPQR 19 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 ITSVIPS(1)PPPPPPLPPPQR 140.68 0.00011486 7880700 3679.9 3242.2 3679.3 2807.2 3921.1 2780.2 3843.1 3176.4 2658.3 2361.3 TRUE FALSE 3366.905181 3031.132191 3429.559367 3023.41103 3764.914284 2937.612521 3586.733811 3148.62907 2934.639798 2653.835671 1.26869392 1.142170265 1.292302837 1.13926083 1.418668957 1.10693083 1.351528224 1.186444626 1.105810669 1 11.37386332 -8.405564902 2.110673993 1.004313959 1.241510562 0.416164943 0.093191668 0.271976292 2.499258554 0.081259846 0.022847177 3.93E-09 8.405564902 0.237196603 ITSVIPS(ph)PPPPPPLPPPQR ddPTM_A459_MK2206_30min_R2 2 ITSVIPSPPPPPPLPPPQR 19 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 IT(0.026)S(0.009)VIPS(0.966)PPPPPPLPPPQR;ITSVIPS(1)PPPPPPLPPPQR 147.53 4.07E-05 16738200 71809 81544 73602 91652 76905 87201 82327 62993 78030 81596 TRUE FALSE 77306.75225 77494.64354 76055.85394 84163.73842 73885.32328 90519.49516 71517.36601 71226.40139 84816.90835 78933.5292 0.979390546 0.981770919 0.963543056 1.066260932 0.936044847 1.146781299 0.906045463 0.902359265 1.074535868 1 16.26835063 ITVGNDHFCVS(ph)TPER ddPTM_A459_MK2206_30min_R2 2 ITVGNDHFCVSTPER 15 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 ITVGNDHFCVS(0.613)T(0.387)PER;ITVGNDHFCVS(0.624)T(0.376)PER 90.379 0.010336 9692900 47259 47562 38982 51545 48909 56116 65570 45130 53921 52834 TRUE FALSE 50877.18538 45200.14024 40281.64042 47333.60862 46988.58691 58251.5337 56960.58024 51028.64595 58610.95111 51110.03091 0.99544423 0.884369261 0.788135709 0.926111915 0.919361348 1.139728008 1.114469689 0.998407652 1.146760236 1 15.64131884 -6.677816605 6.010959783 1.081524699 0.894167916 0.634578072 0.067218673 0.133757402 7.562471782 0.022589279 0.022455426 2.10E-07 6.677816605 -0.187356783 ITVNGDS(ph)SAEAEELANEI ddPTM_A459_MK2206_30min_R1 1 ITVNGDSSAEAEELANEI 18 0 A0A0B4J1W3;Q9BXJ9 A0A0B4J1W3 NAA15 "N-alpha-acetyltransferase 15, NatA auxiliary subunit" 1 IT(0.003)VNGDS(0.667)S(0.33)AEAEELANEI 169.58 9.59E-08 7275100 881.28 811.04 1164.7 961.22 869.46 840.15 922.31 1194.2 1013.5 873.48 TRUE FALSE 806.3225082 758.2411486 1085.643409 1035.253331 834.8275671 887.718567 860.7843827 1183.759235 1118.856952 981.6932968 0.821358881 0.772380896 1.105888583 1.054558826 0.850395505 0.904272821 0.876836366 1.205834082 1.139721495 1 9.939128554 -7.755496891 24.99668742 1.129583353 0.917098918 0.430036911 0.106578611 134.8993091 567452.2687 0.05504922 0.030708866 1.76E-08 7.755496891 -0.212484435 ITVNGDS(ph)SAEAEELANEI ddPTM_A459_MK2206_30min_R2 2 ITVNGDSSAEAEELANEI 18 0 A0A0B4J1W3;Q9BXJ9 A0A0B4J1W3 NAA15 "N-alpha-acetyltransferase 15, NatA auxiliary subunit" 1 ITVNGDS(0.79)S(0.21)AEAEELANEI;IT(0.002)VNGDS(0.948)S(0.05)AEAEELANEI 166.52 1.45E-07 7294400 14292.1 19460.3 19844.9 22492.4 23806.5 18163.9 28661 16020.2 19461.5 24494 TRUE FALSE 15386.31416 18493.9298 20506.51906 20654.69897 22871.73719 18855.13994 24897.77627 18114.09515 21154.22609 23694.76279 0.649355062 0.780507067 0.865445214 0.871698913 0.965265506 0.79575137 1.050771282 0.764476746 0.892780666 1 14.5322806 -4.674929889 1.145420389 0.901466885 0.481318211 0.495152341 0.081673021 1.647486982 1.548670308 0.023853395 0.884056451 2.11E-05 4.674929889 -0.420148673 ITVNGDSS(ph)AEAEELANEI ddPTM_A459_MK2206_30min_R1 2 ITVNGDSSAEAEELANEI 18 0 A0A0B4J1W3;Q9BXJ9 A0A0B4J1W3 NAA15 "N-alpha-acetyltransferase 15, NatA auxiliary subunit" 1 ITVNGDS(0.005)S(0.995)AEAEELANEI;ITVNGDS(0.005)S(0.995)AEAEELANEI 239.55 5.50E-25 28888000 4580.2 4336.7 3623.9 2897.7 3554.5 4022.8 4369 3366.2 3902.8 3820.2 TRUE FALSE 4190.629938 4054.380042 3377.919765 3120.881356 3412.916738 4250.56746 4077.551982 3336.769668 4308.510026 4293.475217 0.976046146 0.94431197 0.786756554 0.726889337 0.794907753 0.990006287 0.949708983 0.777172221 1.003501781 1 12.06793015 -6.756319833 24.99904058 0.930503064 0.841371844 0.21482886 0.09195669 247.5343067 1208724.018 0.033350068 0.032377773 1.75E-07 6.756319833 -0.08913122 ITVNGDSS(ph)AEAEELANEI ddPTM_A459_MK2206_30min_R2 1 ITVNGDSSAEAEELANEI 18 0 A0A0B4J1W3;Q9BXJ9 A0A0B4J1W3 NAA15 "N-alpha-acetyltransferase 15, NatA auxiliary subunit" 1 ITVNGDS(0.005)S(0.995)AEAEELANEI 172.95 4.17E-08 3576800 30397 32853 31983 28018 35314 29101 32682 28815 28962 34461 TRUE FALSE 32724.21769 31221.56779 33049.29726 25728.83977 33927.39492 30208.45895 28390.81414 32581.21944 31481.06241 33336.54039 0.981632086 0.936556926 0.991383535 0.771790938 1.017723931 0.906166585 0.851642486 0.977342551 0.944341016 1 15.02481677 -8.490453839 1.556305397 0.996916364 0.924566287 0.08824139 0.069278293 0.979885476 5.23987143 0.063995935 0.018798054 3.23E-09 8.490453839 -0.072350077 ITVQAS(ph)PGLDR ddPTM_A459_MK2206_30min_R1 2 ITVQASPGLDR 11 0 Q16584;Q16584-2 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 IT(0.008)VQAS(0.992)PGLDR;ITVQAS(1)PGLDR 143.58 0.00082779 31480000 4695.5 5092.9 4470.8 3141.8 4967.2 4592.7 5267.3 5325 4746.7 4474.5 TRUE FALSE 4296.123068 4761.351284 4167.334552 3383.78198 4769.345906 4852.734705 4915.928028 5278.444086 5240.136451 5028.834841 0.854297905 0.946810034 0.828687894 0.672875942 0.94839979 0.964981921 0.977548117 1.049635602 1.042018006 1 12.29600846 -6.502209339 16.20551485 1.002398477 0.831547592 0.620082105 0.066941932 6.531451668 5120.565854 0.022920064 0.025423374 3.15E-07 6.502209339 -0.170850886 ITVQAS(ph)PNLDK ddPTM_A459_MK2206_30min_R1 1 ITVQASPNLDK 11 0 Q5TCX8;Q5TCX8-2 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 IT(0.003)VQAS(0.997)PNLDK 120.29 0.0047741 16390000 3443.7 3698.1 4040.4 3407.1 3399.8 2870.4 3236.1 3467.6 3131.6 2920.1 TRUE FALSE 3150.795231 3457.353018 3766.148905 3669.515432 3264.378767 3032.919567 3020.225674 3437.283139 3457.141027 3281.864034 0.960062696 1.053472351 1.147563966 1.118119275 0.994672154 0.924145405 0.920277514 1.04735696 1.053407756 1 11.68029975 -6.360229751 6.944322374 0.984891252 1.073963659 0.287502207 0.06122756 0.342841473 20.82093394 0.021011005 0.02383627 4.36E-07 6.360229751 0.089072407 ITVQAS(ph)PNLDK ddPTM_A459_MK2206_30min_R2 3 ITVQASPNLDK 11 0 Q5TCX8;Q5TCX8-2 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 ITVQAS(1)PNLDK;ITVQAS(1)PNLDK;IT(0.397)VQAS(0.603)PNLDK 143.56 0.00082908 74862000 371190 378480 379010 418130 399880 325363 461460 327640 358875 404700 TRUE FALSE 399608.5918 359685.2336 391646.0042 383967.4415 384178.702 337744.917 400869.7477 370463.673 390089.2988 391494.6721 1.020725492 0.918748732 1.00038655 0.980773095 0.981312721 0.862706292 1.023946879 0.946280242 0.996410236 1 18.57863315 -8.368884612 7.17728228 0.999481395 0.965784 0.068511702 0.046136724 0.762580775 43.92389155 0.042227714 0.010930968 4.28E-09 8.368884612 -0.033697395 ITVTSEVPFS(ph)KR ddPTM_A459_MK2206_30min_R2 1 ITVTSEVPFSKR 12 1 K7ERI7;P35268;K7EP65;K7EKS7;K7ELC4;K7EMH1 K7ERI7 RPL22 60S ribosomal protein L22 1 ITVTSEVPFS(1)KR 61.649 0.046606 5186300 11884 27184 17838 22509 19631 20221 21723 27059 18228 19237 TRUE FALSE 12793.84818 25834.08209 18432.71002 20669.9427 18860.1883 20990.52432 18870.74401 30595.70421 19813.43849 18609.29827 0.687497615 1.388235156 0.990510752 1.110731979 1.013481972 1.127958939 1.014049199 1.644108433 1.064706375 1 14.18373603 IVADKDYS(ph)VTANSK ddPTM_A459_MK2206_30min_R1 1 IVADKDYSVTANSK 14 1 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;F5H793 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 1 IVADKDYS(0.774)VT(0.225)ANS(0.001)K 109.14 0.029612 0 534.27 1009.6 528.2 582.1 566.16 592.35 759.68 707.34 562.33 467.83 TRUE FALSE 488.8275309 943.8748565 492.3472556 626.9334429 543.6086483 625.8883451 709.0031333 701.155801 620.7862158 525.7883123 0.929704064 1.79516135 0.93639825 1.192368541 1.033892606 1.190380863 1.348457386 1.333532497 1.180677092 1 9.038338263 -12.01065153 1.327920848 0.000113258 1.225059132 0.067904905 0.237350906 286200.9337 22264.15818 850053.0347 0.063466649 9.76E-13 12.01065153 1.224945874 IVADKDYS(ph)VTANSK ddPTM_A459_MK2206_30min_R2 1 IVADKDYSVTANSK 14 1 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;F5H793 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 1 IVADKDY(0.001)S(0.896)VT(0.098)ANS(0.005)K 76.761 0.022855 7725100 47107 51669 38043 44686 47060 32555 49240 34358 28169 40636 TRUE FALSE 50713.54814 49103.19259 39311.33463 41035.01086 45212.18794 33793.90334 42774.72885 38848.70857 30619.0887 39310.05065 1.290091142 1.249125651 1.000032663 1.043880895 1.150143213 0.859675904 1.08813721 0.988264017 0.778912471 1 15.2626106 -1.522878745 0.363373998 0.938004174 5.83964575 0.565959215 0.099275642 47.08527883 0.655073504 0.079542897 160.1275809 0.03 1.522878745 4.901641576 IVADKDYSVT(ph)ANSK ddPTM_A459_MK2206_30min_R2 1 IVADKDYSVTANSK 14 1 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;F5H793 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 1 IVADKDYS(0.034)VT(0.966)ANSK 98.552 0.014278 7551100 34979 41582 40446 41135 36076 31227 50105 38810 29389 41593 TRUE FALSE 37657.01913 39517.09835 41794.44945 37774.13892 34659.47497 32415.36537 43526.15331 43882.60025 31945.2021 40235.82382 0.935907745 0.982137175 1.038737262 0.938818578 0.861408359 0.805634439 1.081776119 1.090635063 0.793949249 1 15.29619295 -10.1821041 14.38935213 0.99999648 0.952534087 0.022111736 0.099789688 0 0 0.099732199 0.024188611 6.58E-11 10.1821041 -0.047462393 IVAHAVEVPAVQS(ph)PR ddPTM_A459_MK2206_30min_R1 2 IVAHAVEVPAVQSPR 15 0 Q96FF9;B5MBX0;H0YCL8 Q96FF9 CDCA5 Sororin 1 IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR 140.89 0.00025643 51319000 15952.4 13906.6 13749.8 12022.5 14680.8 13900.5 12834.1 11195.8 10951.9 9639.3 TRUE FALSE 14595.56461 13001.27781 12816.50189 12948.47503 14096.03265 14687.5343 11977.96061 11097.9163 12090.3892 10833.48926 1.347263496 1.200100679 1.183044685 1.195226646 1.301153517 1.355752883 1.105641989 1.024408299 1.116019863 1 13.40321036 -7.439719608 5.740873593 1.054601543 1.255240498 0.71264359 0.063503781 0.13606547 7.286330888 0.028740971 0.018987009 3.63E-08 7.439719608 0.200638954 IVAHAVEVPAVQS(ph)PR ddPTM_A459_MK2206_30min_R2 4 IVAHAVEVPAVQSPR 15 0 Q96FF9;B5MBX0;H0YCL8 Q96FF9 CDCA5 Sororin 1 IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR 187.56 1.58E-05 111451000 146620 171033 135333 141888 138238 147444 138927 110148 113137 128658 TRUE FALSE 157845.3399 162539.7499 139844.9347 130295.2965 132810.0815 153055.0847 120685.718 124544.7218 122977.4518 124459.9 1.268242542 1.305960795 1.12361439 1.046885756 1.067091341 1.2297542 0.969675518 1.000681519 0.988088949 1 16.92532147 -1.522878745 0.271672143 0.980060582 3.424504511 0.64692426 0.070656565 33.08573621 0.462840478 0.086009757 37.99907348 0.03 1.522878745 2.444443929 IVALMDTYS(ph)PSLPK ddPTM_A459_MK2206_30min_R2 1 IVALMDTYSPSLPK 14 0 K7ERF3;K7ELU8;D3DUE4;F6WF08;Q6ZW76-2;Q6ZW76;K7EJY2;K7EQE0;K7EM53;K7EJS9 K7ERF3 ANKS3 Ankyrin repeat and SAM domain-containing protein 3 1 IVALMDT(0.152)YS(0.8)PS(0.048)LPK 138.31 0.000682 0 22490 28194 27003 30473 26055 25609 26902 22496 21630 25070 TRUE FALSE 24211.85169 26793.92696 27903.26654 27983.25842 25031.94978 26583.56844 23369.73508 25436.30444 23511.3383 24251.96795 0.998345855 1.104814546 1.150556796 1.153855162 1.032161589 1.096140672 0.963622215 1.048834655 0.969461049 1 14.5658142 -7.043687089 1.710780647 0.998761106 1.099792712 0.417071824 0.051463834 0.369742652 2.167666163 0.025261047 0.018492963 9.04E-08 7.043687089 0.101031605 IVDQIRPDR ddPTM_A459_MK2206_30min_R1 1 IVDQIRPDR 9 1 P17844-2;P17844;J3KTA4;J3QSF1;J3KRZ1;A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 P17844-2;A0A1X7SBZ2 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 0 109.48 0.032146 2529400 1802.6 1763 1802.5 1701.2 1868 2036.4 1820.4 1478.5 1355 1495.4 FALSE TRUE 1649.279404 1648.22838 1680.151322 1832.226719 1793.593604 2151.699208 1698.964438 1465.57363 1495.857099 1680.661442 0.981327567 0.980702204 0.999696477 1.090181921 1.06719507 1.280269277 1.010890353 0.872021928 0.890040708 1 10.71481342 -7.569037171 6.793347264 0.914959838 1.067534701 0.360982616 0.086665497 0.231700278 25.79936587 0.044384587 0.025548257 2.70E-08 7.569037171 0.152574864 IVDS(ph)PEK ddPTM_A459_MK2206_30min_R2 2 IVDSPEK 7 0 E9PQC4;Q9BZD4 E9PQC4 NUF2 Kinetochore protein Nuf2 1 IVDS(1)PEK;IVDS(1)PEK 128.86 0.0048472 18103100 244917 195665 209560 176109 161539 126985 239310 187254 128193 239537 TRUE FALSE 263668.0338 185948.5606 216546.6258 161720.3314 155196.1672 131817.5032 207888.3095 211728.7407 139342.9954 231720.9273 1.137868888 0.802467705 0.934514756 0.697909909 0.669754644 0.568863178 0.89714948 0.913722999 0.601339711 1 17.82202882 -1.987176024 1.078210853 0.76493845 199.9999998 0.352576226 0.141647107 985.3877575 2.856554728 0.043597244 483359.7502 0.010299686 1.987176024 199.2350614 IVDS(ph)PEKLK ddPTM_A459_MK2206_30min_R1 1 IVDSPEKLK 9 1 E9PQC4;Q9BZD4 E9PQC4 NUF2 Kinetochore protein Nuf2 1 IVDS(1)PEKLK 121.29 0.029952 31781000 3251.6 3563.3 3736.5 3423.6 2288.1 1796.4 2774.9 3014.5 3025.8 2322.7 TRUE FALSE 2975.034345 3331.328522 3482.87679 3687.286265 2196.960132 1898.110616 2589.791484 2988.144544 3340.342738 2610.453611 1.139661832 1.27614929 1.334203671 1.412507868 0.841600909 0.727119075 0.992084852 1.144684024 1.279602412 1 11.35008481 -6.258025111 24.99987205 0.990958087 1.292708641 0.463121809 0.154505697 306.2446144 2242374.867 0.052151663 0.064574397 5.52E-07 6.258025111 0.301750554 IVEGQGQSSEVIT(ph)PPEEISR ddPTM_A459_MK2206_30min_R1 1 IVEGQGQSSEVITPPEEISR 20 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 IVEGQGQSSEVIT(0.999)PPEEIS(0.001)R 158.44 2.99E-06 5193800 1925.7 1258.2 1194.9 1609.8 1856.6 1801.4 1674.7 1572.3 1389.4 1481 TRUE FALSE 1761.909103 1176.290951 1113.793517 1733.787075 1782.647691 1903.393711 1562.983819 1558.553547 1533.833102 1664.477461 1.058535873 0.706702842 0.669155061 1.041640464 1.070995392 1.143538291 0.939023721 0.936362062 0.921510287 1 10.70085362 -5.779623783 24.99981552 1.010380458 0.800988395 0.375730981 0.11556777 238.9124628 328454.7305 0.033919171 0.050421081 1.66E-06 5.779623783 -0.209392063 IVEGQGQSSEVIT(ph)PPEEISR ddPTM_A459_MK2206_30min_R2 3 IVEGQGQSSEVITPPEEISR 20 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 IVEGQGQSSEVIT(1)PPEEISR;IVEGQGQSSEVIT(0.971)PPEEIS(0.029)R;IVEGQGQSS(0.001)EVIT(0.998)PPEEIS(0.001)R 192.25 3.67E-15 6828500 23392.2 29037.8 24706.6 28853 31542.7 36583.4 28847 25470.3 28300.5 28535.8 TRUE FALSE 25183.12482 27595.82508 25530.30571 26495.6176 30304.17511 37975.60692 25059.35425 28799.35566 30762.02633 27604.67918 0.912277395 0.999679253 0.924854281 0.959823421 1.097791244 1.375694558 0.907793714 1.043278043 1.114377245 1 14.75262521 -6.252033842 6.99735702 1.097332815 0.950614971 0.265228875 0.11431892 0.210808507 63.9270153 0.035479597 0.043812895 5.60E-07 6.252033842 -0.146717844 IVEMS(ph)TSK ddPTM_A459_MK2206_30min_R1 1 IVEMSTSK 8 0 P63241;P63241-2;I3L397;I3L504;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 P63241 EIF5A;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-2 1 IVEMS(0.458)T(0.458)S(0.083)K 92.239 0.026422 0 5673.7 6646.5 6376.8 4990 4615.8 4203 5053.8 4731.8 6033.4 4830.5 TRUE FALSE 5191.122021 6213.811642 5943.960583 5374.330665 4431.942912 4440.970228 4716.670223 4690.430371 6660.593521 5428.938808 0.956194609 1.144572054 1.094866012 0.989941286 0.816355289 0.818018103 0.868801508 0.863968178 1.226868409 1 12.40645451 -5.979829878 5.301063026 0.91525828 1.070356165 0.185145806 0.121475829 0.258305331 21.23494302 0.035552385 0.051799335 1.05E-06 5.979829878 0.155097885 IVEMST(ph)SK ddPTM_A459_MK2206_30min_R2 1 IVEMSTSK 8 0 P63241;P63241-2;I3L397;I3L504;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 P63241 EIF5A;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-2 1 IVEMS(0.047)T(0.951)S(0.002)K 102.06 0.027153 0 60884 73744 62691 67857 62883 52153 77600 67232 51931 66281 TRUE FALSE 65545.32585 70081.98019 64781.08665 62312.86604 60413.89746 54137.71896 67411.02679 76019.45324 56447.86451 64118.2564 1.022256835 1.093011322 1.010337621 0.971842803 0.942226144 0.844341721 1.051354646 1.185613233 0.880371172 1 15.96844757 -5.475489275 5.772953938 0.985739744 1.057161534 0.099520285 0.089529458 0.530698492 42.65118031 0.025069403 0.051748929 3.35E-06 5.475489275 0.07142179 IVENIQVFDFK ddPTM_A459_MK2206_30min_R1 1 IVENIQVFDFK 11 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 204.69 0.00024419 37428000 2624.9 3793 2992.7 3167.8 3082.2 2896.9 3106.8 2624.1 1839.6 2215.1 FALSE TRUE 2401.638471 3546.075011 2789.563862 3411.784505 2959.429447 3060.919975 2899.551041 2601.15777 2030.833003 2489.523311 0.964698125 1.424399199 1.120521286 1.370456942 1.188753459 1.229520511 1.164701302 1.044841701 0.815751752 1 11.28165381 -7.862743162 2.36174644 0.909137456 1.225145114 0.47929609 0.126909703 0.232780555 2.529297467 0.083838096 0.032867669 1.37E-08 7.862743162 0.316007659 IVENIQVFDFK ddPTM_A459_MK2206_30min_R2 2 IVENIQVFDFK 11 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 147.62 0.0091862 6526700 43341 49480 43887 50374 43395 36602 52271 46092 38762 43423 FALSE TRUE 46659.22028 47022.89515 45350.17068 46258.28306 41691.09426 37994.91476 45407.75491 52116.38266 42133.44869 42006.11107 1.110772197 1.119429863 1.079608884 1.101227462 0.992500691 0.90450922 1.080979737 1.240685732 1.003031407 1 15.35831161 -6.142377447 11.77672691 1.044572804 1.102467883 0.130890633 0.081674283 1.545407871 145.1530554 0.026519433 0.034247828 7.20E-07 6.142377447 0.05789508 IVEPEVVGES(ph)DSEVEGDAWR ddPTM_A459_MK2206_30min_R1 2 IVEPEVVGESDSEVEGDAWR 20 0 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 IVEPEVVGES(0.998)DS(0.002)EVEGDAWR;IVEPEVVGES(0.948)DS(0.052)EVEGDAWR 221.81 1.12E-19 17085500 5244.5 5256.8 4819.6 4442.3 5892.4 5690.8 6183.1 5363.7 5205.1 4518.1 TRUE FALSE 4798.427735 4914.581365 4492.45898 4784.446716 5657.693231 6013.008178 5770.636681 5316.805736 5746.188772 5077.836338 0.94497487 0.967849501 0.884719137 0.942221528 1.114193695 1.184167385 1.136436131 1.047061264 1.1316215 1 12.30999818 -6.251872681 7.1263873 1.110581112 0.933251219 0.715510847 0.051526056 0.076485557 25.00674445 0.015568601 0.019234688 5.60E-07 6.251872681 -0.177329892 IVEPEVVGES(ph)DSEVEGDAWR ddPTM_A459_MK2206_30min_R2 3 IVEPEVVGESDSEVEGDAWR 20 0 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 IVEPEVVGES(0.899)DS(0.101)EVEGDAWR;IVEPEVVGES(0.844)DS(0.156)EVEGDAWR;IVEPEVVGES(0.591)DS(0.409)EVEGDAWR 191.97 1.55E-15 9696200 21044 31543.5 28950.1 35226.7 29606.4 36481.5 30908.1 29205.5 27415.6 32298.5 TRUE FALSE 22655.14482 29977.09566 29915.28188 32348.56593 28443.90398 37869.82905 26849.82934 33022.75913 29800.15933 31244.60259 0.72508987 0.959432772 0.957454389 1.035332929 0.910362162 1.21204387 0.859342962 1.056910839 0.953769831 1 14.93131937 -4.232595472 1.428023846 1.00347006 1.40E-16 0.448395149 0.090210101 4.375742016 2.727756419 0.023815734 9.253922504 5.85E-05 4.232595472 -1.00347006 IVEYS(ph)PPSAPR ddPTM_A459_MK2206_30min_R2 3 IVEYSPPSAPR 11 0 O95696;O95696-2 O95696 BRD1 Bromodomain-containing protein 1 1 IVEYS(0.903)PPS(0.097)APR;IVEY(0.029)S(0.849)PPS(0.123)APR;IVEYS(0.999)PPS(0.001)APR 140.45 0.0010849 36940100 72838 85632 78987 90836 85209 89104 94405 66873 68297 80855 TRUE FALSE 78414.53328 81379.6394 81620.38716 83414.40823 81863.26652 92494.91516 82009.5101 75613.53071 74237.34961 78216.70797 1.002529195 1.040438054 1.043516012 1.066452557 1.046621223 1.182546767 1.048490946 0.966718399 0.949123934 1 16.2551892 -7.721985847 5.249359226 0.967894392 1.065029396 0.450462581 0.045391794 0.170307225 11.14286894 0.024083736 0.013054123 1.90E-08 7.721985847 0.097135004 IVEYSPPS(ph)APR ddPTM_A459_MK2206_30min_R1 2 IVEYSPPSAPR 11 0 O95696;O95696-2 O95696 BRD1 Bromodomain-containing protein 1 1 IVEYS(0.315)PPS(0.685)APR;IVEYS(0.23)PPS(0.77)APR 97.779 0.018902 26041000 3941.4 3476.5 3900.9 3214.5 4403.9 3684.8 4515.6 3365.3 3161.1 3167.6 TRUE FALSE 3606.163233 3250.179218 3636.117777 3462.081347 4228.483338 3893.430192 4214.372563 3335.877537 3489.707657 3560.026202 1.012959745 0.912964971 1.02137388 0.972487603 1.187767476 1.093652117 1.183803805 0.937037355 0.980247745 1 11.79767214 IVGPS(ph)GAAVPCK ddPTM_A459_MK2206_30min_R2 1 IVGPSGAAVPCK 12 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 IVGPS(1)GAAVPCK 90.731 0.024007 2890800 31704 27300 20928 31373 21846 24099 30071 27351 22297 32114 TRUE FALSE 34131.28262 25944.3217 21625.72907 28809.72554 20988.21627 25016.10433 26122.64158 30925.86961 24236.35276 31066.12281 1.09866567 0.835132271 0.696119345 0.927367915 0.675598188 0.805253507 0.840872282 0.995485333 0.780153768 1 14.92305458 -10.18465706 7.606507208 1 0.845287461 0.116593937 0.122682693 0 0 0.117504346 0.02849899 6.54E-11 10.18465706 -0.154712539 IVGS(ph)EIDSTGK ddPTM_A459_MK2206_30min_R1 1 IVGSEIDSTGK 11 0 Q6JVE9-2;Q6JVE9 Q6JVE9-2 LCN8 Epididymal-specific lipocalin-8 1 IVGS(1)EIDSTGK 88.819 0.030109 9142900 2130.6 2399.3 2256.2 1733 2087.8 1969.6 2247.9 2048 1700.6 1752.5 TRUE FALSE 1949.381282 2243.105134 2103.05543 1866.47596 2004.638505 2081.11705 2097.946693 2030.094552 1877.383456 1969.612931 0.989728109 1.138855812 1.067750621 0.947635919 1.017782973 1.056612199 1.065156844 1.030707364 0.953173807 1 10.94369642 -6.297200529 0.219835883 0.987025248 1.08487221 0.091463446 0.052615038 15.44652559 1.330857562 0.129516747 0.439402878 5.04E-07 6.297200529 0.097846962 IVLDNSVFSEHR ddPTM_A459_MK2206_30min_R2 1 IVLDNSVFSEHR 12 0 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 194.06 0.00022427 7985400 39806 67077 47216 84025 73945 87021 77586 49851 66465 52090 FALSE TRUE 42853.57797 63746.05372 48790.15787 77159.88872 71041.54776 90332.64513 67398.865 56366.69686 72246.00556 50390.30757 0.850432951 1.265045934 0.968244891 1.531244647 1.409825643 1.792659134 1.337536289 1.118601961 1.433728212 1 15.62085864 -5.756291517 24.99884631 1.397058785 1.051621677 0.32775561 0.225328337 151.6341272 736348.8332 0.061980735 0.103313078 1.75E-06 5.756291517 -0.345437108 IVLEDGTLHVTEGSGR ddPTM_A459_MK2206_30min_R1 3 IVLEDGTLHVTEGSGR 16 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 0 ;; 117.48 0.0025824 11041100 2530.32 2144.42 2450.93 1817.15 2989.63 2618.9 2816.01 2331.35 1894.64 1813.43 FALSE TRUE 2315.102997 2004.817868 2284.5677 1957.107208 2870.546706 2767.179855 2628.159111 2310.967253 2091.594608 2038.091399 1.135917161 0.983674171 1.120934862 0.960264691 1.408448467 1.357730991 1.28951975 1.133887937 1.026251624 1 10.99300304 -6.239135697 24.99774486 1.221432777 1.050498697 0.231764453 0.133358712 1149.807455 1288692.941 0.040956874 0.052834525 5.77E-07 6.239135697 -0.17093408 IVLEDGTLHVTEGSGR ddPTM_A459_MK2206_30min_R2 1 IVLEDGTLHVTEGSGR 16 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 0 126.07 0.0016193 2755700 4824.7 7218.8 5848 6038.2 7386 9192.7 7515.2 5115.6 6943.8 7652.5 FALSE TRUE 5194.082742 6860.324889 6042.969401 5544.859745 7095.988528 9542.53464 6528.445213 5784.226484 7547.759172 7402.799552 0.701637631 0.926720336 0.816308663 0.749022003 0.95855473 1.28904404 0.881888692 0.781356627 1.01958173 1 12.85385525 -6.35381375 6.267198781 0.988863218 0.809416565 0.331016985 0.132342334 0.332352397 18.68942622 0.043973099 0.049946184 4.43E-07 6.35381375 -0.179446653 IVNHWAS(ph)PELR ddPTM_A459_MK2206_30min_R1 2 IVNHWASPELR 11 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 IVNHWAS(1)PELR;IVNHWAS(1)PELR 118.52 0.0034967 23513700 7619.6 7573.3 7723 5923.1 7523.5 6808.3 7455.6 6803 5579 5688.6 TRUE FALSE 6971.513008 7080.276793 7198.784278 6379.298188 7223.823064 7193.780062 6958.250528 6743.522088 6158.957015 6393.346715 1.090432495 1.107444522 1.125980586 0.997802633 1.129896967 1.125197863 1.088358076 1.054771842 0.963338497 1 12.64235562 -8.056921417 3.017366381 0.982289541 1.095198476 0.595165747 0.036891221 0.186753805 3.203273151 0.029156098 0.010002217 8.77E-09 8.056921417 0.112908935 IVNHWAS(ph)PELR ddPTM_A459_MK2206_30min_R2 3 IVNHWASPELR 11 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 IVNHWAS(1)PELR;IVNHWAS(1)PELR;IVNHWAS(1)PELR 115.09 0.0041525 20656600 88115 101222 80962 102104 102562 99404 114278 77563 74060 100209 TRUE FALSE 94861.15215 96195.46267 83661.23267 93761.77659 98534.90055 103186.8889 99273.16133 87700.75041 80501.60493 96939.18854 0.978563505 0.992327913 0.863027986 0.967222627 1.016460959 1.064449687 1.024076669 0.904698623 0.830434071 1 16.56479239 -7.786064057 19.51505683 0.900673154 0.985456657 0.226530032 0.062389276 29.08841258 23047.97569 0.036067038 0.017367341 1.64E-08 7.786064057 0.084783504 IVPQSQVPNPES(ph)PGK ddPTM_A459_MK2206_30min_R1 2 IVPQSQVPNPESPGK 15 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 IVPQSQVPNPES(1)PGK;IVPQSQVPNPES(1)PGK 114.58 0.0024815 12838600 6233.2 8109.4 7858.1 6502 5254.9 5027.8 6696.2 5932.4 8643.9 8328 TRUE FALSE 5703.033608 7581.476586 7324.714066 7002.785167 5045.586206 5312.469691 6249.508716 5880.533652 9542.464337 9359.735513 0.60931568 0.810009703 0.782577035 0.74818195 0.539073588 0.567587587 0.667701422 0.628279896 1.019522862 1 13.19225205 -8.264996552 24.99032927 1.009761491 0.672443726 0.721278229 0.084688305 185.3673589 1302237.403 0.080001649 0.02384769 5.43E-09 8.264996552 -0.337317765 IVPQSQVPNPES(ph)PGK ddPTM_A459_MK2206_30min_R2 4 IVPQSQVPNPESPGK 15 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 IVPQSQVPNPES(1)PGK;IVPQSQVPNPES(1)PGK;IVPQSQVPNPES(1)PGK;IVPQSQVPNPES(1)PGK 182.28 2.06E-05 52756400 183328 144887 166334 138578 129686.7 111762 191598 131440.6 124309 184859 TRUE FALSE 197363.7326 137692.1223 171879.4925 127255.7341 124594.5485 116015.1812 166440.9524 148620.3377 135121.1721 178827.066 1.103656941 0.769973614 0.961149206 0.711613387 0.696732051 0.648756275 0.930736919 0.831084137 0.755596874 1 17.44820558 -4.75759699 24.95805131 0.80303122 1.103657382 0.373147616 0.113001788 117.3380912 762053.2229 0.028098432 0.205902948 1.75E-05 4.75759699 0.300626162 IVS(ph)DGEDEDDSFK ddPTM_A459_MK2206_30min_R1 2 IVSDGEDEDDSFK 13 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 IVS(1)DGEDEDDSFK;IVS(1)DGEDEDDSFK 124.42 0.0022636 10311600 2088.2 2498.7 2495.9 1884.41 1479.98 1824.18 2535.1 1677.13 3342.9 3562 TRUE FALSE 1910.587624 2336.034176 2326.485262 2029.547585 1421.029263 1927.463495 2365.988105 1662.467029 3690.406418 4003.287452 0.477254668 0.583528963 0.581143695 0.506970236 0.354965583 0.481470171 0.591011296 0.415275458 0.921843975 1 11.9669695 -8.324395793 5.38425263 0.982238225 0.502562408 0.864889715 0.073097946 0.078426482 4.478444105 0.072529161 0.01922176 4.74E-09 8.324395793 -0.479675817 IVS(ph)DGEDEDDSFK ddPTM_A459_MK2206_30min_R2 2 IVSDGEDEDDSFK 13 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 IVS(1)DGEDEDDSFK;IVS(1)DGEDEDDSFK 126.63 0.0020081 3077000 40781 29877.5 33593 31235.7 28572.1 23256.2 39342 26642.4 24383.7 40254 TRUE FALSE 43903.22472 28393.8268 34712.97385 28683.64339 27450.21579 24141.23099 34176.34814 30124.65316 26504.55015 38940.51528 1.127443343 0.72915899 0.891435915 0.736601537 0.704926876 0.619951503 0.877655262 0.773606947 0.680641999 1 15.24898435 -4.757431141 24.9999333 0.770191086 1.12744386 0.481286461 0.108043957 97.65162505 608983.0183 0.025792542 0.191643967 1.75E-05 4.757431141 0.357252774 IVS(ph)LDSANTR ddPTM_A459_MK2206_30min_R1 1 IVSLDSANTR 10 0 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 IVS(0.999)LDS(0.001)ANTR 102.05 0.015706 5476800 1867.1 1934.5 2117.4 1939 2153.1 1796.2 1909.5 1964.9 1605.7 1869.9 TRUE FALSE 1708.29334 1808.563698 1973.676787 2088.342116 2067.337468 1897.899292 1782.120739 1947.721086 1772.618261 2101.557329 0.812870207 0.860582613 0.93914963 0.993711705 0.983716903 0.903091848 0.848000059 0.926798931 0.843478423 1 11.0372431 -5.055540006 3.271554566 0.92724521 0.817550349 0.353385509 0.052022405 0.297879398 6.090057053 0.014477793 0.057841406 8.80E-06 5.055540006 -0.109694861 IVS(ph)PGLTIHER ddPTM_A459_MK2206_30min_R2 1 IVSPGLTIHER 11 0 A0A0U1RR07;Q9HCH5-15;Q9HCH5-14;Q9HCH5-6;Q9HCH5;Q9HCH5-13 A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 IVS(1)PGLTIHER 133.98 0.0011362 2167600 11108 10390 10845 14386 9441.7 10766 11481 9056.1 12795 10741 TRUE FALSE 11958.43702 9874.047708 11206.56689 13210.61778 9070.971417 11175.70767 9973.530909 10239.76336 13907.88597 10390.52205 1.150898575 0.950293706 1.078537424 1.271410399 0.873004395 1.075567486 0.959868124 0.98549075 1.338516574 1 13.34298052 -11.60285146 2.963435865 0.886048835 1.066027487 0.021899071 0.138669122 0.173376539 0.004678822 0.22297717 0.0314747 2.50E-12 11.60285146 0.179978653 IWDMTPVVGCSLATGFS(ph)PH ddPTM_A459_MK2206_30min_R1 1 IWDMTPVVGCSLATGFSPH 19 0 Q8IWB7 Q8IWB7 WDFY1 WD repeat and FYVE domain-containing protein 1 1 IWDMTPVVGCSLAT(0.006)GFS(0.994)PH 134.81 0.00036334 0 409.63 391.1 354.11 434.87 326.13 357.06 354.12 501.62 415.23 322.49 TRUE FALSE 374.7888174 365.6393189 330.0739998 468.3637627 313.1395515 377.2764286 330.4973009 497.2343892 458.3946444 362.4424959 1.034064222 1.008820221 0.91069343 1.292242957 0.863970299 1.040927686 0.911861343 1.371898701 1.264737578 1 8.501608309 -7.756304166 24.99995798 1.238738609 1.011707502 0.299946256 0.140522345 132.7683185 646370.8004 0.065290211 0.036218386 1.75E-08 7.756304166 -0.227031108 IWDPTPSHT(ph)PAGAATPGR ddPTM_A459_MK2206_30min_R1 1 IWDPTPSHTPAGAATPGR 18 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 IWDPT(0.018)PS(0.043)HT(0.934)PAGAAT(0.005)PGR 187.56 2.06E-14 0 940.31 907.94 889.58 800.42 926.93 701.28 934.28 715.44 871.64 1105 TRUE FALSE 860.3316967 848.832941 829.1977881 862.0684871 890.0084153 740.9858676 871.9558859 709.1849835 962.2500972 1241.895742 0.692756781 0.683497746 0.667687117 0.69415528 0.716653085 0.596657064 0.702116817 0.571050338 0.774823574 1 10.27832835 -8.568436836 7.10264798 0.999995821 0.667996053 0.84172614 0.044230261 0.209321694 32.21025552 0.040586679 0.0104995 2.70E-09 8.568436836 -0.331999768 IWDPTPSHT(ph)PAGAATPGR ddPTM_A459_MK2206_30min_R2 2 IWDPTPSHTPAGAATPGR 18 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 IWDPT(0.042)PS(0.053)HT(0.904)PAGAAT(0.001)PGR;IWDPTPSHT(0.92)PAGAAT(0.08)PGR 146.67 0.00055837 13685300 25262 25098.1 23466 28293.6 20185 23763.7 27719 16468.2 16791.5 25642 TRUE FALSE 27196.07814 23851.76485 24248.34473 25981.92237 19392.43548 24668.04426 24079.462 18620.65028 18251.99432 24805.30364 1.096381586 0.961559076 0.977546781 1.04743416 0.781785854 0.994466531 0.97073845 0.750672137 0.735810155 1 14.598361 -6.125347165 0.593436927 0.843736988 1.05848945 0.292024675 0.102104165 1.433907006 0.994187218 0.072921759 0.173370041 7.49E-07 6.125347165 0.214752462 IWDPTPSHTPAGAAT(ph)PGR ddPTM_A459_MK2206_30min_R1 1 IWDPTPSHTPAGAATPGR 18 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 IWDPTPSHT(0.026)PAGAAT(0.973)PGR 95.361 0.0054498 7157700 3108.2 3298.4 3270.4 2907.4 3018.4 3120 3704.6 3007.4 3450.4 4463.6 TRUE FALSE 2843.831268 3083.67356 3048.41436 3131.328452 2898.170736 3296.651704 3457.472893 2981.106619 3809.081427 5016.584466 0.566885953 0.614695832 0.607667304 0.624195301 0.577717919 0.657150642 0.689208547 0.594250259 0.759297776 1 12.29248973 -9.650662463 0.419714648 1.067148079 0.594560394 0.907623865 0.037388714 1.380981644 0.292664792 0.18164351 0.023163792 2.24E-10 9.650662463 -0.472587686 IWHHTFYNELR ddPTM_A459_MK2206_30min_R1 2 IWHHTFYNELR 11 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;A5A3E0;Q9BYX7;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;A6NL76;P0CG38;P0CG39 P60709;P63261;P68133;P0CG38 ACTB;POTEE;POTEF;POTEKP;ACTG1;ACTA1;ACTC1;POTEI;POTEJ "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;POTE ankyrin domain family member I;POTE ankyrin domain family member J" 0 ; 95.483 0.011945 516680000 11124.4 4342 7148.5 5231.4 17100.8 15193.3 15900 8837.2 4632.8 4521.8 FALSE TRUE 10178.21136 4059.335011 6663.279737 5634.323334 16419.63892 16053.53152 14839.34001 8759.937292 5114.396139 5081.994722 2.002798492 0.798768049 1.311154399 1.108683429 3.230943719 3.158903619 2.919983358 1.723720266 1.006375728 1 12.31117916 -6.227133682 24.86169729 2.296119606 1.2695809 0.209405688 0.804076776 846.2314047 613272.5453 0.250150424 0.322927488 5.93E-07 6.227133682 -1.026538706 IWHHTFYNELR ddPTM_A459_MK2206_30min_R2 2 IWHHTFYNELR 11 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;A5A3E0;Q9BYX7;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;A6NL76;P0CG38;P0CG39 P60709;P63261;P68133;P0CG38 ACTB;POTEE;POTEF;POTEKP;ACTG1;ACTA1;ACTC1;POTEI;POTEJ "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;POTE ankyrin domain family member I;POTE ankyrin domain family member J" 0 ; 90.149 0.015925 6200900 14291.1 35677 20617.1 28253 44626 47896 32535 21195.2 32634 18823.8 FALSE TRUE 15385.2376 33905.33206 21304.46382 25944.63952 42873.75901 49718.71584 28263.11542 23965.48541 35472.44633 18209.58095 0.84489795 1.861950155 1.169959039 1.424779604 2.354461596 2.730360242 1.552101364 1.316092088 1.94801003 1 14.1524101 -4.756569485 24.87851607 1.738153033 0.844896493 0.202044197 0.510131861 243.9208615 1245947.878 0.134198863 1.072868595 1.75E-05 4.756569485 -0.89325654 IWLS(ph)TETLANED ddPTM_A459_MK2206_30min_R1 3 IWLSTETLANED 12 0 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 IWLS(0.876)T(0.124)ETLANED;IWLS(0.495)T(0.495)ET(0.011)LANED;IWLS(0.5)T(0.5)ET(0.001)LANED 174.77 0.00012939 19773700 7178.66 6380.21 6261.06 5166.95 7151.47 6945.58 6932.21 5903.97 5289.65 5569.09 TRUE FALSE 6568.07727 5964.857169 5836.076692 5564.909384 6866.611806 7338.832737 6469.774919 5852.352213 5839.528047 6259.030914 1.049376071 0.953000113 0.932424967 0.889100799 1.097072678 1.172519011 1.033670389 0.935025293 0.932976387 1 12.61172359 -4.71417337 21.98965605 0.996786958 1.049379323 0.038148346 0.082372355 13286.48865 6179208.47 0.023159339 11.09802828 1.93E-05 4.71417337 0.052592365 IWLS(ph)TETLANED ddPTM_A459_MK2206_30min_R2 2 IWLSTETLANED 12 0 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 IWLS(0.602)T(0.398)ETLANED;IWLS(0.882)T(0.099)ET(0.019)LANED 111.52 0.0067616 631110 11476.8 8807.1 10940.4 12788.1 10883 11821.9 9261.6 9928.6 9227.2 10807.1 TRUE FALSE 12355.47263 8369.752221 11305.14748 11743.27132 10455.67874 12271.79069 8045.540795 11226.30211 10029.76518 10454.46521 1.181836888 0.80059114 1.081370232 1.123278052 1.000116077 1.173832467 0.769579374 1.073828444 0.959376207 1 13.35183164 -7.232675389 24.98943099 0.956848215 1.049474068 0.153119811 0.124278213 1590.373057 1381678.007 0.046137565 0.035732419 5.85E-08 7.232675389 0.092625853 IWLST(ph)ETLANED ddPTM_A459_MK2206_30min_R1 1 IWLSTETLANED 12 0 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 IWLS(0.077)T(0.923)ETLANED 174.23 0.00035451 2454100 931.76 829.68 1013.6 689.07 1017.1 705.44 1179.7 957.96 671.64 753.36 TRUE FALSE 852.5089191 775.6676812 944.7996561 742.1422908 976.5867533 745.3814032 1101.004365 949.5846567 741.4593815 846.6919244 1.006870261 0.916115601 1.115871817 0.876519864 1.153414513 0.880345474 1.300360065 1.121523224 0.875713303 1 9.725693319 -6.269834292 24.88026166 1.064814918 0.98415143 0.070962297 0.132142518 1668.711803 4945602.964 0.040083798 0.046201381 5.37E-07 6.269834292 -0.080663487 IWSTVPT(ph)DEEDEMEESTNRPR ddPTM_A459_MK2206_30min_R1 2 IWSTVPTDEEDEMEESTNRPR 21 1 Q9GZL7 Q9GZL7 WDR12 Ribosome biogenesis protein WDR12 1 IWS(0.001)T(0.005)VPT(0.994)DEEDEMEESTNRPR;IWST(0.002)VPT(0.998)DEEDEMEESTNRPR 163.41 5.37E-08 12476500 1977.03 2008.21 1918.75 1886.51 2148.88 1653.46 1790.63 1607.37 1410.94 1544.29 TRUE FALSE 1808.873217 1877.475164 1788.510596 2031.809327 2063.285559 1747.077476 1671.18034 1593.316934 1557.612262 1735.608304 1.042212815 1.081738984 1.030480548 1.170661216 1.188796778 1.006608157 0.962878742 0.918016427 0.897444578 1 10.76122568 -7.003049958 4.197105716 0.94131728 1.101833191 0.663690637 0.053116495 0.136942243 5.752350229 0.021906601 0.018002638 9.93E-08 7.003049958 0.160515911 IWYEHR ddPTM_A459_MK2206_30min_R1 2 IWYEHR 6 0 O75874;H0YL11;P48735-2;P48735 O75874 IDH1;IDH2 "Isocitrate dehydrogenase [NADP] cytoplasmic;Isocitrate dehydrogenase [NADP], mitochondrial" 0 ; 130.01 0.016864 36145000 8387 8097.8 8775.7 7299.3 8840.8 7855.6 8943.2 7951.8 7060.6 6815.3 FALSE TRUE 7673.641608 7570.631748 8180.029935 7861.493351 8488.652215 8300.377283 8346.615446 7882.278251 7794.574637 7659.630817 1.001829173 0.988380763 1.067940496 1.026354081 1.108232553 1.083652395 1.089689 1.029067646 1.017617536 1 12.90305914 -5.259251 24.96237384 1.057309172 0.995104962 0.316624621 0.033398553 201.7183828 2300923.173 0.008865964 0.021167479 5.50E-06 5.259251 -0.06220421 IWYEHR ddPTM_A459_MK2206_30min_R2 4 IWYEHR 6 0 O75874;H0YL11;P48735-2;P48735 O75874 IDH1;IDH2 "Isocitrate dehydrogenase [NADP] cytoplasmic;Isocitrate dehydrogenase [NADP], mitochondrial" 0 ;;; 138.53 0.013124 31748900 59721.5 82906.5 61996.1 67574.3 62209.7 65666.3 58777.7 47333.4 62420.2 55630.8 FALSE TRUE 64293.82396 78789.48377 64063.01903 62053.26353 59767.0346 68165.27706 51060.11739 53520.0379 67849.39617 53815.57155 1.194706701 1.464064796 1.190417888 1.153072647 1.110589981 1.266645974 0.948798199 0.994508399 1.260776281 1 15.71573606 -5.555478097 3.085683861 1.104655218 1.331139508 0.358828909 0.117729461 0.256365989 4.974302103 0.032549327 0.066976211 2.78E-06 5.555478097 0.22648429 IYAS(ph)EEDD ddPTM_A459_MK2206_30min_R2 1 IYASEEDD 8 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 IYAS(1)EEDD 91.069 0.027913 0 112100 134960 109570 116090 120040 107950 141840 110560 117740 154110 TRUE FALSE 120682.4622 128258.0827 113223.0091 106605.0756 115326.6264 112058.1129 123216.2376 125010.5716 127980.8124 149081.4033 0.809507152 0.86032248 0.759471045 0.715079636 0.773581573 0.751657218 0.826503071 0.838539005 0.858462622 1 17.18574078 -8.665105992 0.845952828 0.999038288 0.779694291 0.74674209 0.038158655 0.436943382 0.663318549 0.041198414 0.014457652 2.16E-09 8.665105992 -0.219343997 IYASS(ph)SPPDTGQR ddPTM_A459_MK2206_30min_R1 1 IYASSSPPDTGQR 13 0 A0A494C0H7;A0A494C094;F8WDA1;A0A494C188;A0A494C155;A0A494C1K7;Q9UGJ0-3;Q9UGJ0;E9PGP6 A0A494C0H7 PRKAG2 5-AMP-activated protein kinase subunit gamma-2 1 IYAS(0.081)S(0.46)S(0.46)PPDTGQR 154.23 0.00039024 12980000 2920 2363.2 2694.8 2447.8 3527.6 3157.7 3243.9 3070.3 2350.7 1643.6 TRUE FALSE 2671.638666 2209.35525 2511.884484 2636.32998 3387.088222 3336.486245 3027.50535 3043.456691 2595.063677 1847.221577 1.446301137 1.196042358 1.35981764 1.427186654 1.83361231 1.806218749 1.638950837 1.647586153 1.404846993 1 10.85114121 -6.028260046 9.39536604 1.606803071 1.332145058 0.136315987 0.231350023 0.592503294 191.5011092 0.06556477 0.086696295 9.37E-07 6.028260046 -0.274658013 IYASS(ph)SPPDTGQR ddPTM_A459_MK2206_30min_R2 3 IYASSSPPDTGQR 13 0 A0A494C0H7;A0A494C094;F8WDA1;A0A494C188;A0A494C155;A0A494C1K7;Q9UGJ0-3;Q9UGJ0;E9PGP6 A0A494C0H7 PRKAG2 5-AMP-activated protein kinase subunit gamma-2 1 IYAS(0.022)S(0.489)S(0.489)PPDTGQR;IYAS(0.001)S(0.499)S(0.499)PPDTGQR;IYAS(0.061)S(0.47)S(0.47)PPDTGQR 174.46 0.00012286 21543000 46918 54117 43205 60213 59443 61728 61578 45365 55106 54729 TRUE FALSE 50510.07815 51429.62847 44645.43314 55293.40529 57108.96914 64077.10229 53492.73463 51294.36126 59899.02027 52943.19721 0.954042839 0.971411459 0.843270439 1.044391125 1.0786838 1.210299069 1.010379755 0.96885651 1.131382754 1 15.6921577 -5.903931094 7.253459675 1.068687781 0.928363625 0.445395867 0.072085857 0.216468179 14.13539119 0.021033414 0.03136091 1.25E-06 5.903931094 -0.140324156 IYASSS(ph)PPDTGQR ddPTM_A459_MK2206_30min_R1 3 IYASSSPPDTGQR 13 0 A0A494C0H7;A0A494C094;F8WDA1;A0A494C188;A0A494C155;A0A494C1K7;Q9UGJ0-3;Q9UGJ0;E9PGP6 A0A494C0H7 PRKAG2 5-AMP-activated protein kinase subunit gamma-2 1 IYASS(0.227)S(0.773)PPDTGQR;IYAS(0.001)S(0.147)S(0.852)PPDTGQR;IYAS(0.022)S(0.127)S(0.851)PPDTGQR 167.22 0.00031163 24330600 6398.8 5558.7 5905.5 5648.2 6774.7 6515.1 7378.3 6616.5 5289.8 5097.5 TRUE FALSE 5854.548459 5196.82762 5504.651114 6083.225343 6504.849353 6883.979332 6886.107069 6558.652638 5839.69364 5729.016784 1.021911556 0.90710637 0.960836968 1.061827111 1.135421591 1.201598737 1.201970134 1.144812956 1.019318647 1 12.48407185 -5.93316893 2.792645784 1.132169484 0.956311343 0.493541633 0.068521271 0.201466916 3.186728234 0.02093131 0.032835664 1.17E-06 5.93316893 -0.175858141 IYEAGSENNT(ph)AVVAVET(ph)HT(ph)IHK ddPTM_A459_MK2206_30min_R2 1 IYEAGSENNTAVVAVETHTIHK 22 0 Q9Y692 Q9Y692 GMEB1 Glucocorticoid modulatory element-binding protein 1 3 IY(0.098)EAGS(0.102)ENNT(0.8)AVVAVET(1)HT(1)IHK 87.952 0.0011949 0 5136.6 5010.3 5875 6468.2 4934.1 5814.3 7097.1 3604.8 3888.6 6002.4 TRUE FALSE 5529.862045 4761.495788 6070.869568 5939.727369 4740.362442 6035.567261 6165.242245 4075.959737 4226.823399 5806.54218 0.952350276 0.820022595 1.04552234 1.022937092 0.81638302 1.039442593 1.061775159 0.701959895 0.727941565 1 12.50346357 -7.764451935 24.9997024 0.78621305 0.962292572 0.282897097 0.111481903 91.31784626 757773.1042 0.05722477 0.029353754 1.72E-08 7.764451935 0.176079522 IYEFPET(ph)DDEEENKLVK ddPTM_A459_MK2206_30min_R1 1 IYEFPETDDEEENKLVK 17 1 E7EPK1;G3V1Q4;Q16181;Q16181-2;E7ES33 E7EPK1 Sep-07 Septin-7 1 IYEFPET(1)DDEEENKLVK 85.087 0.016499 11751000 1558 2008.2 2065.1 1551.4 1097.7 1224.6 1487.6 1513 1549 1514.6 TRUE FALSE 1425.483919 1877.465815 1924.926766 1670.889097 1053.976285 1293.935794 1388.364918 1499.772001 1710.024093 1702.240083 0.837416492 1.102938319 1.130819786 0.981582512 0.619170172 0.760137073 0.81561052 0.881057858 1.004572804 1 10.73321881 -6.017925939 24.64817898 0.831781962 1.035738724 0.286969647 0.12808914 707.850614 973295.9948 0.038565246 0.050872646 9.60E-07 6.017925939 0.203956762 IYGADDIELLPEAQHK ddPTM_A459_MK2206_30min_R2 2 IYGADDIELLPEAQHK 16 0 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586 V9GZ78 MTHFD1 "C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed" 0 ; 127.32 0.0014715 3118500 32731 42431 33689 38108 34867 37627 43446 29567 33256 39497 FALSE TRUE 35236.91053 40323.93824 34812.17445 34994.4545 33497.94639 39058.92185 37741.48801 33431.50842 36148.54677 38208.21612 0.922233857 1.055373486 0.911117502 0.915888205 0.876721025 1.022264995 0.987784614 0.874982185 0.946093548 1 15.22159528 -5.297618118 24.99501393 0.938649903 0.98880384 0.09926451 0.055904316 1118.894135 773015.0927 0.014646809 0.030491121 5.04E-06 5.297618118 0.050153937 IYHLPDAES(ph)DEDEDFK ddPTM_A459_MK2206_30min_R1 4 IYHLPDAESDEDEDFK 16 0 B5MCX3;Q15019;Q15019-3;Q15019-2;H7C2Y0 B5MCX3 Sep-02 Septin-2 1 IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK 178.71 7.28E-07 37731900 13343.5 15599 15787.6 11029.6 9504.4 8821.1 13418.2 10223.5 18503.6 24631.1 TRUE FALSE 12208.56526 14583.50226 14715.9817 11879.1017 9125.819622 9320.543059 12523.09636 10134.11702 20427.11544 27682.58662 0.441019671 0.526811402 0.531597061 0.429118199 0.329659209 0.336693358 0.452381728 0.366082735 0.737904868 1 14.75669113 -8.490248023 3.168163802 0.997921922 0.4286898 0.883796763 0.067355566 0.075834334 1.754003269 0.073417792 0.019535499 3.23E-09 8.490248023 -0.569232122 down IYHLPDAES(ph)DEDEDFK ddPTM_A459_MK2206_30min_R2 5 IYHLPDAESDEDEDFK 16 0 B5MCX3;Q15019;Q15019-3;Q15019-2;H7C2Y0 B5MCX3 Sep-02 Septin-2 1 IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK 142.26 0.00026118 20645500 153323 109117.3 120656.7 109031 97694.2 83862.5 127793 106526 82751.4 152571 TRUE FALSE 165061.5268 103698.6936 124679.3342 100122.8185 93858.23483 87053.9462 111013.6256 120449.314 89948.96719 147592.6208 1.118358939 0.702600801 0.844753169 0.678372794 0.635927693 0.589825872 0.752162439 0.816093063 0.609440816 1 17.17126107 -4.759444551 24.99260767 0.725145761 1.11835944 0.479352454 0.118830581 42.9971822 538559.4839 0.028341521 0.179855305 1.74E-05 4.759444551 0.393213679 IYHLPDAES(ph)DEDEDFKEQTR ddPTM_A459_MK2206_30min_R1 8 IYHLPDAESDEDEDFKEQTR 20 1 B5MCX3;Q15019;Q15019-3;Q15019-2;H7C2Y0 B5MCX3 Sep-02 Septin-2 1 IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR 160.47 4.95E-07 3408890000 62934 80504.7 76404.5 68641.3 54539.7 48282.8 56993.1 59010.8 62095.1 57806 TRUE FALSE 57581.13282 75263.8294 71218.37542 73928.06482 52367.26826 51016.53041 53191.19429 58494.8748 68550.10785 64967.44369 0.886307503 1.158485314 1.096216372 1.137924792 0.806054006 0.78526301 0.818736143 0.900372117 1.055145531 1 15.98742932 -6.258969779 24.99237198 0.880054183 1.077964548 0.395196211 0.105272258 210.9643463 2134957.637 0.032387191 0.03988315 5.51E-07 6.258969779 0.197910365 IYHLPDAES(ph)DEDEDFKEQTR ddPTM_A459_MK2206_30min_R2 13 IYHLPDAESDEDEDFKEQTR 20 1 B5MCX3;Q15019;Q15019-3;Q15019-2;H7C2Y0 B5MCX3 Sep-02 Septin-2 1 IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IY(0.001)HLPDAES(0.998)DEDEDFKEQT(0.001)R;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IY(0.015)HLPDAES(0.985)DEDEDFKEQTR 123.58 0.00010422 3828551600 1859859 1999138 1907256 1742635 1674887 1287031 1976135 1503438 1428355 2070111 TRUE FALSE 2002251.235 1899863.714 1970842.963 1600256.146 1609122.521 1336009.867 1716666.101 1699942.509 1552590.736 2002563.448 0.999844094 0.948715865 0.98416006 0.799103843 0.803531355 0.667149831 0.857234313 0.848883221 0.775301645 1 20.93341652 -5.761223823 24.99999794 0.80960046 0.974687625 0.442447111 0.079420918 4.818109536 558641.1292 0.02131429 0.034141782 1.73E-06 5.761223823 0.165087165 IYHLPDAESDEDEDFKEQTR ddPTM_A459_MK2206_30min_R1 1 IYHLPDAESDEDEDFKEQTR 20 1 B5MCX3;Q15019;Q15019-3;Q15019-2;H7C2Y0 B5MCX3 Sep-02 Septin-2 0 63.462 0.016077 4417000 1680.7 1823.8 1581.6 1378.5 1352.9 1513.1 1379.1 1422.8 1384.9 1379.7 FALSE TRUE 1537.747639 1705.070289 1474.245399 1484.672309 1299.011128 1598.770414 1287.102755 1410.36061 1528.865311 1550.627652 0.991693678 1.099600079 0.950741073 0.957465389 0.837732467 1.031047274 0.830052755 0.909541764 0.985965463 1 10.59863658 -5.409335533 5.319632826 0.929430655 1.044806619 0.295596438 0.06623708 0.238257879 9.477000369 0.01665189 0.035464065 3.90E-06 5.409335533 0.115375964 IYHPNIDEK ddPTM_A459_MK2206_30min_R2 2 IYHPNIDEK 9 0 A0A1B0GUS4;P68036-2;P68036;P68036-3 A0A1B0GUS4 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 0 ; 100.25 0.024574 0 110734 130057 121063 127833 124509 107199 131030 103751 113595 129498 FALSE TRUE 119211.8802 123598.5585 125099.18 117388.635 119620.1511 111278.5331 113825.6036 117311.6119 123475.2878 125272.4909 0.951620578 0.98663767 0.998616529 0.937066344 0.954879641 0.888291853 0.908624095 0.9364515 0.985653649 1 16.93471012 -5.777292955 24.86721676 0.938381171 0.979726197 0.170946041 0.033012395 314.8220667 493814.9429 0.009482759 0.014120771 1.67E-06 5.777292955 0.041345026 IYISNTFS(ph)PSKAEGDSAGTAGTPGGTPAGDK ddPTM_A459_MK2206_30min_R2 1 IYISNTFSPSKAEGDSAGTAGTPGGTPAGDK 31 1 J3KMX2;B9EGA3;Q92925-3;Q92925-2;Q92925 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 1 IY(0.002)IS(0.027)NT(0.209)FS(0.553)PS(0.209)KAEGDSAGTAGTPGGTPAGDK 80.245 8.27E-06 8436200 56317 59322 58126 55738 55947 35480 68477 46525 37063 61552 TRUE FALSE 60628.67282 56376.15574 60063.89183 51184.0271 53750.23967 36830.21626 59485.88764 52605.97724 40286.67275 59543.56328 1.018223792 0.946805207 1.00873862 0.859606384 0.902704452 0.618542362 0.999031371 0.883487221 0.676591566 1 15.86165794 -5.825250928 4.96787908 0.840999901 0.986960528 0.238290746 0.11647205 0.286791802 13.75935287 0.032402867 0.049989786 1.50E-06 5.825250928 0.145960627 IYISNTFSPS(ph)KAEGDSAGTAGTPGGTPAGDK ddPTM_A459_MK2206_30min_R2 1 IYISNTFSPSKAEGDSAGTAGTPGGTPAGDK 31 1 J3KMX2;B9EGA3;Q92925-3;Q92925-2;Q92925 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 1 IY(0.001)IS(0.004)NT(0.056)FS(0.387)PS(0.53)KAEGDS(0.003)AGT(0.002)AGT(0.016)PGGTPAGDK 63.202 0.00039953 9094900 16170 19383 17510 16425 18163 12096 17476 17498 13278 23092 TRUE FALSE 17407.98763 18420.46841 18093.77466 15083.02496 17449.82936 12556.32176 15181.38021 19785.04868 14432.89644 22338.50993 0.779281505 0.824605959 0.809981271 0.675202823 0.781154581 0.562093076 0.679605768 0.885692409 0.646099336 1 14.44724533 -10.66861629 3.882340321 1.000119516 0.739690767 0.420971473 0.092099781 39441582.49 73840829.08 62221.95272 0.023279427 2.14E-11 10.66861629 -0.260428749 IYLEENPEKSETIQDTDTQSLVGS(ph)PSTR ddPTM_A459_MK2206_30min_R1 1 IYLEENPEKSETIQDTDTQSLVGSPSTR 28 1 Q9NZN5-2;E9PMR6;Q9NZN5 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 IYLEENPEKSETIQDTDTQS(0.001)LVGS(0.57)PS(0.306)T(0.123)R 78.485 4.35E-05 11721000 1287.2 1235 1219.6 1172 1203.9 1072 1210.2 1115.2 815.82 480.25 TRUE FALSE 1177.716881 1154.601276 1136.81695 1262.267643 1155.946114 1132.695714 1129.469766 1105.449924 900.6274084 539.7469957 2.181979502 2.13915276 2.106203386 2.338628382 2.141644368 2.098567889 2.092591112 2.048089073 1.668610322 1 9.076139498 -8.649425497 1.157768798 0.997962961 2.170187212 0.968786714 0.064322172 0.101915558 0.285188947 0.063191144 0.019768135 2.24E-09 8.649425497 1.17222425 IYNISGNGS(ph)PLADSK ddPTM_A459_MK2206_30min_R1 2 IYNISGNGSPLADSK 15 0 Q53HL2 Q53HL2 CDCA8 Borealin 1 IYNISGNGS(0.657)PLADS(0.343)K;IYNISGNGS(0.999)PLADSK 230.45 6.81E-14 169560000 8889.9 9313.1 8784.6 7802.8 7742.2 7755.2 7282.4 7404.2 7862.8 6305.4 TRUE FALSE 8133.767322 8706.815497 8188.325827 8403.773008 7433.81178 8194.292722 6796.604383 7339.46586 8680.166197 7086.560555 1.147773629 1.228637705 1.155472498 1.185874719 1.049001377 1.1563145 0.959083653 1.035688019 1.224877164 1 12.79086987 -6.255653371 24.32341031 1.071299015 1.181241855 0.34256606 0.073693324 383.9327745 1613986.646 0.021761653 0.027305846 5.55E-07 6.255653371 0.109942841 IYNISGNGS(ph)PLADSK ddPTM_A459_MK2206_30min_R2 2 IYNISGNGSPLADSK 15 0 Q53HL2 Q53HL2 CDCA8 Borealin 1 IYNISGNGS(0.531)PLADS(0.469)K;IYNISGNGS(0.992)PLADS(0.007)K 172.95 3.56E-05 72000000 93066 97857 89158 96031 90004 77118 108362 76321 72090 89206 TRUE FALSE 100191.2045 92997.56368 92130.48322 88184.96011 86469.99073 80052.77953 94133.93923 86296.41675 78360.25789 86295.21553 1.161028499 1.077667668 1.067619829 1.021898602 1.002025317 0.927661853 1.090836133 1.00001392 0.908048696 1 16.39699295 -2.538577524 0.454226822 0.982321559 2.549452127 0.582108849 0.046778209 25.87111334 0.770898764 0.029860863 33.30775623 0.002893493 2.538577524 1.567130569 IYNISGNGSPLADS(ph)K ddPTM_A459_MK2206_30min_R1 1 IYNISGNGSPLADSK 15 0 Q53HL2 Q53HL2 CDCA8 Borealin 1 IYNIS(0.001)GNGS(0.089)PLADS(0.91)K 77.24 0.035256 6638200 3815.1 4365 4669.8 3673.1 3448.4 3863.7 4151.3 3849.2 4352.6 3749.1 TRUE FALSE 3490.605711 4080.837707 4352.826987 3956.002798 3311.042926 4082.459355 3874.374351 3815.54685 4805.068346 4213.566812 0.828420639 0.968499584 1.033050425 0.938872688 0.785805251 0.968884448 0.919499921 0.905538471 1.140380243 1 12.04082629 -8.248022641 24.58654562 1.070190123 0.922010881 0.40270153 0.073766183 559.2054553 1024765.275 0.051123575 0.019070464 5.65E-09 8.248022641 -0.148179242 IYNISGNGSPLADS(ph)K ddPTM_A459_MK2206_30min_R2 2 IYNISGNGSPLADSK 15 0 Q53HL2 Q53HL2 CDCA8 Borealin 1 IYNISGNGS(0.351)PLADS(0.648)K;IYNIS(0.001)GNGS(0.373)PLADS(0.626)K 198.67 2.45E-05 74349000 115826 121397 108876 120037 118180 103495 144975 96868 94989 116900 TRUE FALSE 124693.7276 115368.6015 112505.8715 110229.5931 113539.6594 107433.5747 125939.6084 109528.9802 103250.9715 113085.5626 1.102649399 1.020188598 0.994873872 0.974745057 1.004015515 0.950020253 1.11366655 0.968549634 0.913034071 1 16.78705523 -4.723851306 2.139242023 0.991669211 1.144002049 0.326374367 0.048846999 1.024410147 4.70035791 0.013094316 0.32010296 1.89E-05 4.723851306 0.152332838 IYPVGYFT(ph)K ddPTM_A459_MK2206_30min_R2 1 IYPVGYFTK 9 0 Q2L6G8;G8JLG2;Q15517 Q2L6G8 CDSN Corneodesmosin 1 IYPVGY(0.334)FT(0.666)K 100.07 0.042673 45768000 122270 114510 98116 102330 117550 90722 139750 86156 93276 112470 TRUE FALSE 131631.0852 108823.5999 101387.1385 93969.31166 112934.3964 94174.48928 121400.6571 97416.88502 101388.9779 108800.1131 1.209843275 1.000215871 0.931866113 0.863687628 1.037998887 0.86557345 1.115813703 0.895374851 0.931883019 1 16.73132053 -4.768974247 3.263622845 0.95408731 1.249718406 0.508750061 0.074699563 0.27016551 4.369010168 0.018071403 0.208114757 1.70E-05 4.768974247 0.295631096 IYQY(ph)IQSR ddPTM_A459_MK2206_30min_R1 4 IYQYIQSR 8 0 A0A2R8Y6L5;A0A2R8Y6I6;Q13627-5;Q13627-2;Q13627;A0A2R8Y443;A0A2R8YDF3;Q13627-4;Q13627-3;Q9Y463-2;Q9Y463-3;Q9Y463 A0A2R8Y6L5 DYRK1A;DYRK1B Dual specificity tyrosine-phosphorylation-regulated kinase 1A;Dual specificity tyrosine-phosphorylation-regulated kinase 1B 1 IYQY(1)IQSR;IYQY(1)IQSR;IYQY(1)IQSR;IYQY(1)IQSR 185.55 0.0022322 327686000 10943.5 9719.8 10691.1 8994.2 10339.3 9998.5 10755.4 9802 8436.9 8803.7 TRUE FALSE 10012.69786 9087.039253 9965.417919 9686.934842 9927.463787 10564.60643 10037.92689 9716.302147 9313.945947 9894.368821 1.011959231 0.918405147 1.007180761 0.979035148 1.003344828 1.067739299 1.014509068 0.982003231 0.94133806 1 13.27239196 -4.443914375 23.57104331 0.991907158 2.468773479 0.025987625 0.038619313 2850.2503 1507895.42 0.009855929 174050.0938 3.60E-05 4.443914375 1.476866321 IYQY(ph)IQSR ddPTM_A459_MK2206_30min_R2 4 IYQYIQSR 8 0 A0A2R8Y6L5;A0A2R8Y6I6;Q13627-5;Q13627-2;Q13627;A0A2R8Y443;A0A2R8YDF3;Q13627-4;Q13627-3;Q9Y463-2;Q9Y463-3;Q9Y463 A0A2R8Y6L5 DYRK1A;DYRK1B Dual specificity tyrosine-phosphorylation-regulated kinase 1A;Dual specificity tyrosine-phosphorylation-regulated kinase 1B 1 IYQY(1)IQSR;IYQY(1)IQSR;IYQY(1)IQSR;IYQY(1)IQSR 215.39 0.0022322 385330000 137055 185711 173464 199341 160925 187808 184967 138243 147002 170540 TRUE FALSE 147548.0362 176488.8618 179247.2032 183054.2026 154606.2759 194955.165 160680.6107 156311.8348 159787.9682 164975.2938 0.89436444 1.06978965 1.086509374 1.109585553 0.937148056 1.1817234 0.97396772 0.947486325 0.968556955 1 17.33189046 -7.481502698 24.99751853 0.966958195 1.049836888 0.175652008 0.078135053 779.699149 471059.5326 0.031730375 0.021389977 3.30E-08 7.481502698 0.082878694 IYRST(ph)PPEVIVEVLEPY(ph)VRLT(ph)T(ph)ANVR ddPTM_A459_MK2206_30min_R1 1 IYRSTPPEVIVEVLEPYVRLTTANVR 26 2 E9PGM9;P78332;P78332-2;F8WCA5;F8WF63 E9PGM9 RBM6 RNA-binding protein 6 4 IY(0.073)RS(0.442)T(0.488)PPEVIVEVLEPY(0.998)VRLT(0.999)T(1)ANVR 47.105 0.021143 10117000 0 0 0 0 0 157.2 73.679 0 0 0 TRUE FALSE 0 0 0 0 0 166.1005282 68.76400834 0 0 0 0 IYS(ph)S(ph)Y(ph)PKVQET(ph)LPVTY(ph)K ddPTM_A459_MK2206_30min_R2 1 IYSSYPKVQETLPVTYK 17 1 Q9NR99 Q9NR99 MXRA5 Matrix-remodeling-associated protein 5 5 IY(0.088)S(0.914)S(0.783)Y(0.755)PKVQET(0.994)LPVT(0.613)Y(0.852)K 48.131 0.036614 3976900 19844 13882 18210 16187 14579 12398 14018 11281 13772 13967 TRUE FALSE 21363.2719 13192.64007 18817.11231 14864.47032 14006.55521 12869.81458 12177.41976 12755.46543 14969.86367 13511.25793 1.581146034 0.976418342 1.39269877 1.100154434 1.036658117 0.952525267 0.901279498 0.944062018 1.107954843 1 13.72187438 -6.048889333 2.220403851 0.977028983 1.285676832 0.474299177 0.150711889 0.276714491 2.712557871 0.045601135 0.068249142 8.94E-07 6.048889333 0.308647849 IYSFTDNAPS(ph)PSIGGSSR ddPTM_A459_MK2206_30min_R1 1 IYSFTDNAPSPSIGGSSR 18 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 IYSFTDNAPS(0.981)PS(0.019)IGGSSR 156.83 2.25E-05 6980200 1606.1 1667.9 1320.1 1085.2 1586.8 1344 1808.6 1132.2 1635.3 1793.4 TRUE FALSE 1469.492761 1559.319407 1230.49529 1168.782292 1523.594396 1420.096119 1687.951594 1122.301295 1805.295287 2015.579931 0.729066974 0.773633128 0.610491934 0.579873948 0.755908695 0.704559564 0.837452074 0.556813092 0.895670402 1 10.97697928 -8.471744567 5.662028885 0.999456935 0.697447078 0.604053589 0.084391557 0.11790862 8.329329321 0.081099802 0.021044318 3.37E-09 8.471744567 -0.302009857 IYVDDGLISLQVK ddPTM_A459_MK2206_30min_R1 2 IYVDDGLISLQVK 13 0 P14618;P14618-3;B4DNK4;H3BQ34;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 193.3 0.0025693 37900000 12039.8 9031.7 10893.1 10217.5 12569.1 9974 9770.1 10484.6 8636.2 9813.9 FALSE TRUE 11015.75179 8443.734688 10153.70672 11004.45362 12068.44613 10538.71926 9118.354456 10392.93425 9533.963895 11029.72002 0.998733582 0.765543882 0.920577014 0.997709244 1.094175202 0.955483842 0.826707699 0.94226637 0.864388568 1 13.42910855 -5.515924245 24.68758354 0.95304278 0.872369161 0.098045425 0.086856349 554.1834236 1967277.758 0.024300261 0.04431586 3.05E-06 5.515924245 -0.08067362 KAAS(ph)EELLEK ddPTM_A459_MK2206_30min_R1 3 KAASEELLEK 10 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 KAAS(1)EELLEK;KAAS(1)EELLEK;KAAS(1)EELLEK 139.78 0.0026756 33649700 4105.1 4114.4 4024.82 4288 3704 3526.85 4062.07 4484.34 4174.25 3115.97 TRUE FALSE 3755.939688 3846.551812 3751.626432 4618.262503 3556.461837 3726.537199 3791.096722 4445.133888 4608.178225 3501.999888 1.072512795 1.098387189 1.07128114 1.318750043 1.015551671 1.064116881 1.082551926 1.269312973 1.315870466 1 11.77396332 -7.752996455 24.9276662 1.219443795 1.105290062 0.11849277 0.108650649 290.7263954 858374.757 0.051123526 0.028893194 1.77E-08 7.752996455 -0.114153732 KAAS(ph)EELLEK ddPTM_A459_MK2206_30min_R2 4 KAASEELLEK 10 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 KAAS(1)EELLEK;KAAS(1)EELLEK;KAAS(1)EELLEK;KAAS(1)EELLEK 88.78 0.016309 54383800 242896 278900 232974 228016 246017 197951 307398 292709 235570 257989 TRUE FALSE 261492.3045 265050.2316 240741.2369 209386.3634 236357.1364 205484.164 267036.2733 330967.0713 256059.4528 249570.8401 1.047767858 1.062024039 0.964620854 0.83898569 0.947054297 0.823350052 1.069981867 1.326144798 1.025999082 1 17.92908985 -7.514490716 24.89776218 1.14525583 0.948226038 0.333664913 0.108948811 387.2224635 1149383.472 0.049150269 0.030144584 3.06E-08 7.514490716 -0.197029792 KAAS(ph)LTEDRDR ddPTM_A459_MK2206_30min_R1 4 KAASLTEDRDR 11 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 KAAS(0.767)LT(0.233)EDRDR;KAAS(0.894)LT(0.106)EDRDR;KAAS(0.657)LT(0.343)EDRDR;KAAS(0.5)LT(0.5)EDRDR 145.31 0.017396 260404800 23849.9 28702.9 27707.4 24575.1 26112.7 19069.1 18787 16900.4 11460.9 12463.4 TRUE FALSE 21821.34076 26834.33599 25826.69889 26467.87846 25072.57586 20148.77596 17533.75351 16752.64158 12652.30157 14007.46009 1.557837083 1.91571747 1.843781723 1.889555872 1.78994448 1.438431796 1.251743957 1.195979962 0.903254515 1 13.77390776 -7.210015526 1.181340404 1.001462851 1.828383033 0.899528304 0.11382629 0.13951117 0.382848271 0.074186767 0.044253419 6.17E-08 7.210015526 0.826920182 KAAS(ph)PSPQSVR ddPTM_A459_MK2206_30min_R1 4 KAASPSPQSVR 11 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KAAS(0.98)PS(0.013)PQS(0.007)VR;KAAS(0.843)PS(0.135)PQS(0.022)VR;KAAS(0.987)PS(0.013)PQSVR;KAAS(0.928)PS(0.071)PQS(0.001)VR 150.9 0.001087 101197000 9350.2 10522.3 10380 9598 9241.9 8557.3 8646.57 8715.7 6740.57 6331.62 TRUE FALSE 8554.91639 9837.296357 9675.43452 10337.23962 8873.775553 9041.806931 8069.773092 8639.499554 7441.276373 7116.028887 1.202203719 1.382413775 1.359667685 1.452669711 1.247012301 1.270625383 1.13402759 1.214090006 1.045706319 1 12.79685665 -7.671087001 0.702323728 1.008727518 1.350596501 0.717063359 0.073060592 0.371822417 0.355020425 0.06764642 0.034793648 2.13E-08 7.671087001 0.341868983 KAAS(ph)PSPQSVR ddPTM_A459_MK2206_30min_R2 2 KAASPSPQSVR 11 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KAAS(0.983)PS(0.017)PQSVR;KAAS(0.982)PS(0.018)PQSVR 159.66 0.0010579 84769000 7792.1 11431 11625.4 12225.4 10897.3 9735.9 10043.7 10698.3 11456.2 10129.4 TRUE FALSE 8388.669167 10863.35316 12012.98503 11226.54571 10469.41725 10106.4065 8724.950125 12096.60454 12452.63957 9798.878508 0.856084618 1.108632294 1.225955095 1.145697 1.068430151 1.031383999 0.890402929 1.234488675 1.270822937 1 13.25840093 -7.82909574 24.99999905 1.18949237 1.059985428 0.157326045 0.123705033 98.98571116 36574.22259 0.069442164 0.033358943 1.48E-08 7.82909574 -0.129506941 KAASLT(ph)EDRDR ddPTM_A459_MK2206_30min_R1 1 KAASLTEDRDR 11 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 KAAS(0.207)LT(0.793)EDRDR 145.83 0.013549 7696500 2940.8 3399 3204.6 3068.1 2819.4 2052.2 2033.7 2076.2 1157.8 1596.4 TRUE FALSE 2690.669517 3177.724482 2987.080681 3304.405594 2707.097328 2168.393791 1898.035584 2058.048002 1278.157453 1794.174084 1.499670261 1.771134981 1.664877844 1.841741904 1.508826458 1.208574915 1.057888195 1.147072639 0.71239322 1 10.80910416 -6.85439371 1.603630282 0.972471073 1.703227637 0.85943118 0.132063119 0.130405713 0.692360135 0.058926656 0.049719025 1.40E-07 6.85439371 0.730756564 KAASPS(ph)PQSVR ddPTM_A459_MK2206_30min_R1 1 KAASPSPQSVR 11 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KAAS(0.148)PS(0.849)PQS(0.003)VR 124.48 0.0063914 21626000 2579.9 2865.6 3083.6 2596.2 2588.8 2408.4 2878.1 2893.3 2075.5 1887.6 TRUE FALSE 2360.465957 2679.048919 2874.293823 2796.159774 2485.682614 2544.761527 2686.1072 2868.004183 2291.255652 2121.450139 1.112666244 1.262838504 1.354872203 1.318041713 1.171690331 1.199538693 1.266165606 1.35190742 1.080042189 1 11.05083506 -8.448108139 4.973445333 1.001306277 1.25557349 0.586192401 0.07355734 0.13732315 5.803093038 0.073985425 0.019260463 3.56E-09 8.448108139 0.254267212 KADGYNQPDSK ddPTM_A459_MK2206_30min_R2 1 KADGYNQPDSK 11 1 O43390;B4DT28;O43390-4;O43390-3;O43390-2;O60506-2;O60506 O43390;O60506-2 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q 0 90.793 0.036973 2351400 11041 14586 11449 14721 11771 10794 13884 13599 12710 11671 FALSE TRUE 11886.30745 13861.68045 11830.70395 13518.24721 11308.8114 11204.77323 12061.01412 15376.43599 13815.49283 11290.17623 1.052800879 1.227764755 1.047875933 1.197345988 1.001650565 0.992435637 1.068275099 1.361930557 1.223673798 1 13.46278038 -7.703183541 24.99998971 1.219605498 1.085827437 0.167840538 0.109420845 107.4599137 46115.00377 0.050578004 0.029201205 1.98E-08 7.703183541 -0.133778061 KADTTT(ph)PTTSAITASR ddPTM_A459_MK2206_30min_R1 1 KADTTTPTTSAITASR 16 1 Q15059;Q15059-2 Q15059 BRD3 Bromodomain-containing protein 3 1 KADT(0.011)T(0.027)T(0.59)PT(0.05)T(0.019)S(0.078)AIT(0.011)AS(0.214)R 80.733 0.028301 6585900 1829.3 1943 1902.6 1616.9 1660.5 1514.3 1731.6 1744.9 1463.2 1274.2 TRUE FALSE 1673.708429 1816.510347 1773.456813 1741.433918 1594.358769 1600.038357 1616.088123 1729.644523 1615.304876 1432.057516 1.16874386 1.268461865 1.238397755 1.216036297 1.113334312 1.117300346 1.128507833 1.20780381 1.127960894 1 10.48387372 -14.52287874 0.078678149 0.411352098 1.359438613 0.632127794 0.044986399 182.8551079 1.017206474 18.76927934 1.809510266 3.00E-15 14.52287874 0.948086515 KADTTTPTPTAILAPGS(ph)PASPPGSLEPK ddPTM_A459_MK2206_30min_R1 2 KADTTTPTPTAILAPGSPASPPGSLEPK 28 1 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440-4;P25440-3;P25440;P25440-2;H0YDJ7;U3KPW0;E9PIQ3;U3KQA6;A0A0G2JHL0;A0A140T9F7;A0A140T9V2 H0Y6K2 BRD2 Bromodomain-containing protein 2 1 KADTTTPTPTAILAPGS(0.986)PAS(0.014)PPGSLEPK;KADTTTPTPTAILAPGS(0.654)PAS(0.345)PPGS(0.001)LEPK 152.05 1.02E-14 38213000 6826 8003.3 7958.9 6832.1 6105.9 5790.2 7143.6 6672.4 6956.1 6470.7 TRUE FALSE 6245.412855 7482.283715 7418.672043 7358.309526 5862.689074 6118.03612 6667.063478 6614.06391 7679.211488 7272.339167 0.858790096 1.028868916 1.020121844 1.011821555 0.806162768 0.841274861 0.916770151 0.909482322 1.05594793 1 12.82820377 -8.257762941 24.91278045 1.027973969 0.92682992 0.23869125 0.074037687 470.3872434 3187560.531 0.060198233 0.020822713 5.52E-09 8.257762941 -0.10114405 KADTTTPTPTAILAPGS(ph)PASPPGSLEPK ddPTM_A459_MK2206_30min_R2 1 KADTTTPTPTAILAPGSPASPPGSLEPK 28 1 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440-4;P25440-3;P25440;P25440-2;H0YDJ7;U3KPW0;E9PIQ3;U3KQA6;A0A0G2JHL0;A0A140T9F7;A0A140T9V2 H0Y6K2 BRD2 Bromodomain-containing protein 2 1 KADTTTPTPTAILAPGS(0.635)PAS(0.365)PPGSLEPK 168.06 4.47E-22 12679000 37562 40907 41082 42650 43067 35790 46660 35459 37105 55055 TRUE FALSE 40437.7756 38875.61786 42451.65338 39165.35857 41375.97319 37152.01353 40533.48595 40093.61305 40332.32583 53258.55986 0.759272795 0.729941214 0.797086018 0.73538148 0.776888697 0.69757826 0.761069884 0.752810687 0.757292836 1 15.7007258 -9.560830332 1.466667456 1.000329815 0.750808019 0.894944884 0.025506513 7.76330124 10.48811994 0.033748366 0.006755831 2.75E-10 9.560830332 -0.249521797 KADTTTPTPTAILAPGSPAS(ph)PPGSLEPK ddPTM_A459_MK2206_30min_R2 1 KADTTTPTPTAILAPGSPASPPGSLEPK 28 1 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440-4;P25440-3;P25440;P25440-2;H0YDJ7;U3KPW0;E9PIQ3;U3KQA6;A0A0G2JHL0;A0A140T9F7;A0A140T9V2 H0Y6K2 BRD2 Bromodomain-containing protein 2 1 KADTTTPTPTAILAPGS(0.139)PAS(0.86)PPGSLEPK 185.77 1.32E-32 14113000 107310 113810 101370 104760 114930 86172 128880 102170 86734 119780 TRUE FALSE 115525.7361 108158.3609 104749.6252 96200.77289 110417.2707 89451.33584 111957.9012 115523.9698 94277.96654 115871.5884 0.99701521 0.93343297 0.904014752 0.830236076 0.952927911 0.771986792 0.966223927 0.996999967 0.813641789 1 16.82216734 -9.915254737 8.941357248 1.00000735 0.907507664 0.122369907 0.074406318 0 0 0.070561441 0.017113663 1.22E-10 9.915254737 -0.092499686 KADVSEQVSNGPVESVT(ph)LENSPLVWK ddPTM_A459_MK2206_30min_R1 1 KADVSEQVSNGPVESVTLENSPLVWK 26 1 F5GYK2;Q9NRL3;Q9NRL3-3;M0R2A7;M0QYS2;M0R0P4;Q9NRL3-2;M0QXN2;M0R0W8 F5GYK2 STRN4 Striatin-4 1 KADVSEQVSNGPVES(0.055)VT(0.472)LENS(0.472)PLVWK 86.073 0.00010419 13913000 2754.7 2974.5 2696.5 2347.2 2741.3 2710.9 2609.9 2745 2399.9 1836.1 TRUE FALSE 2520.398299 2780.859509 2513.469093 2527.981751 2632.108216 2864.388815 2435.798333 2721.000754 2649.378193 2063.56993 1.221377702 1.347596449 1.218019829 1.225052621 1.275512004 1.388074508 1.180380804 1.31858907 1.283880985 1 11.01092661 -10.63195128 4.075062149 0.999938493 1.274372859 0.641105036 0.06130879 6617546.174 3453074.271 3533.396477 0.014309774 2.33E-11 10.63195128 0.274434366 KADVSEQVSNGPVESVTLENS(ph)PLVWK ddPTM_A459_MK2206_30min_R1 1 KADVSEQVSNGPVESVTLENSPLVWK 26 1 F5GYK2;Q9NRL3;Q9NRL3-3;M0R2A7;M0QYS2;M0R0P4;Q9NRL3-2;M0QXN2;M0R0W8 F5GYK2 STRN4 Striatin-4 1 KADVSEQVSNGPVESVT(0.056)LENS(0.944)PLVWK 102.49 4.90E-07 11750000 3115.7 2679.1 2818.9 2460.7 2552.1 2265 2871.5 2648.5 2074 2002.7 TRUE FALSE 2850.693354 2504.690103 2627.560922 2650.22354 2450.444453 2393.242343 2679.947474 2625.344444 2289.599722 2250.809596 1.266519105 1.112795195 1.167384805 1.177453457 1.088694689 1.063280673 1.190659343 1.166400058 1.017233855 1 11.1362283 -5.154228101 0.019315774 7.68E-07 2.347327002 0.485169589 0.057003288 1425.860295 4.874378637 260.8992765 334.2056312 7.01E-06 5.154228101 2.347326235 KAEAAAAPTVAPGPAQPGHVS(ph)PTPATTSPGEK ddPTM_A459_MK2206_30min_R2 2 KAEAAAAPTVAPGPAQPGHVSPTPATTSPGEK 32 1 Q9Y6R0;A0A0C4DGH3;M0QYC2 Q9Y6R0 NUMBL Numb-like protein 1 KAEAAAAPTVAPGPAQPGHVS(0.635)PT(0.093)PAT(0.111)T(0.135)S(0.026)PGEK;KAEAAAAPTVAPGPAQPGHVS(0.711)PT(0.192)PAT(0.057)T(0.023)S(0.016)PGEK 92.126 6.26E-08 25312000 188416 180725 168255 182125 161534 148357 199012 159131 135848 207368 TRUE FALSE 202841.2738 171750.4593 173864.5377 167244.8049 155191.3635 154002.8296 172881.4853 179929.9681 147663.8135 200601.5991 1.01116479 0.85617692 0.866715612 0.83371621 0.773629743 0.767704895 0.861815091 0.896951813 0.736104867 1 17.61397358 -3.865768642 1.322114782 0.831932632 2.345017555 0.324553668 0.071598988 14.17072588 3.423095938 0.019723664 51.0327844 0.000136217 3.865768642 1.513084924 KAEAGAGS(ph)ATEFQFR ddPTM_A459_MK2206_30min_R2 2 KAEAGAGSATEFQFR 15 1 P46783;Q9NQ39 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 1 KAEAGAGS(0.743)AT(0.257)EFQFR;KAEAGAGS(0.986)AT(0.014)EFQFR 93.342 0.010222 18340000 32949 50863 39360 41275 51604 44954 52353 40266 48091 46258 TRUE FALSE 35471.60077 48337.21738 40672.24276 37902.70047 49577.76767 46664.75597 45478.98821 45528.90445 52273.86825 44748.60525 0.792686176 1.080194949 0.908905262 0.847014119 1.107917608 1.042820345 1.016321916 1.017437397 1.168167543 1 15.4495551 -6.266935479 24.96955976 1.056728705 0.919678695 0.441567651 0.083015545 465.8324651 2116340.414 0.0250094 0.029165943 5.41E-07 6.266935479 -0.13705001 KAEAGAGSAT(ph)EFQFR ddPTM_A459_MK2206_30min_R1 1 KAEAGAGSATEFQFR 15 1 P46783;Q9NQ39 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 1 KAEAGAGS(0.37)AT(0.63)EFQFR 161.94 0.014826 10486000 3136.3 2452.4 3049 3041.1 3320.1 2414.6 2943.8 3012.1 2040.7 1682.8 TRUE FALSE 2869.541216 2292.748314 2842.042375 3275.326049 3187.853387 2551.312565 2747.424473 2985.765527 2252.838068 1891.277968 1.517249851 1.212274638 1.502710031 1.731805744 1.685555185 1.348988677 1.452681477 1.578702643 1.191172374 1 10.8851457 -8.452893599 3.56649656 1.002926141 1.50014716 0.580173407 0.143018089 0.162276018 4.069607166 0.149155928 0.039422377 3.52E-09 8.452893599 0.497221019 KAEDS(ph)DS(ph)EPEPEDNVR ddPTM_A459_MK2206_30min_R2 3 KAEDSDSEPEPEDNVR 16 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 2 KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR 133.32 0.0019367 10275000 77625 85305 84613 77760 88816 61486 93804 72580 66393 97501 TRUE FALSE 83568.02968 81068.87775 87433.95519 71406.75926 85328.63758 63825.89282 81487.42212 82066.4552 72167.74313 94319.55035 0.886009628 0.859512979 0.926997159 0.757072728 0.904676043 0.676698442 0.863950494 0.870089551 0.765140873 1 16.52526922 -5.74305723 24.9938634 0.8261791 0.887707208 0.080056041 0.085391814 577.7778231 785587.2883 0.021744076 0.037573261 1.81E-06 5.74305723 0.061528108 KAEDS(ph)DSEPEPEDNVR ddPTM_A459_MK2206_30min_R1 1 KAEDSDSEPEPEDNVR 16 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 KAEDS(0.97)DS(0.03)EPEPEDNVR 187.56 1.40E-13 0 486.09 576.85 483.65 367.15 362.66 508.05 410.42 400.5 460.72 362.46 TRUE FALSE 444.7454929 539.2969602 450.8211855 395.4279566 348.2144843 536.815352 383.0416307 396.9984707 508.6134927 407.3642812 1.091763597 1.323869041 1.106678239 0.970698647 0.854798764 1.317777176 0.940292628 0.974553953 1.248547102 1 8.670175676 -5.513978041 22.49557899 1.041723205 1.209680729 0.173276021 0.142285372 171.7101662 433974.9213 0.03731594 0.069452378 3.06E-06 5.513978041 0.167957524 KAEDS(ph)DSEPEPEDNVR ddPTM_A459_MK2206_30min_R2 4 KAEDSDSEPEPEDNVR 16 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 KAEDS(0.944)DS(0.056)EPEPEDNVR;KAEDS(0.97)DS(0.03)EPEPEDNVR;KAEDS(0.997)DS(0.003)EPEPEDNVR;KAEDS(0.975)DS(0.025)EPEPEDNVR 120.9 0.00080471 50106000 131827 140973 169078 135826 161385 122520 164355 118345 121297 158095 TRUE FALSE 141919.7765 133972.4858 174714.9761 124728.5813 155048.214 127182.5845 142774.9911 133813.0978 131847.1938 152936.3731 0.927966144 0.876001458 1.142403031 0.815558646 1.013808624 0.831604555 0.933558108 0.874959273 0.862104881 1 17.22257204 -6.759848833 24.99999811 0.894699872 0.953398704 0.080810385 0.091126431 109.7460534 1724986.199 0.029459038 0.027988152 1.74E-07 6.759848833 0.058698833 KAEFPSSGSNSVLNTPPT(ph)TPESPSSVTVTEGSR ddPTM_A459_MK2206_30min_R2 1 KAEFPSSGSNSVLNTPPTTPESPSSVTVTEGSR 33 1 Q4LE39-2;Q4LE39;H0Y7Y8;H7C5R6;Q4LE39-4;Q4LE39-3 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 KAEFPSSGSNSVLNT(0.002)PPT(0.936)T(0.024)PES(0.027)PS(0.007)S(0.002)VT(0.002)VTEGSR 107.58 9.67E-14 8478000 21945 30781 24864 30187 31681 28738 29876 26242 25431 28340 TRUE FALSE 23625.12607 29252.4603 25692.95335 27720.62554 30437.04476 29831.64473 25953.24531 29671.9195 27642.94241 27415.26812 0.861750685 1.067013467 0.937176804 1.011138225 1.110222399 1.088139813 0.94667122 1.082313672 1.008304653 1 14.74269196 -4.753406586 24.9979366 1.029018842 0.861750379 0.443307067 0.055839255 287.3228371 894073.7351 0.014049458 0.151832007 1.76E-05 4.753406586 -0.167268462 KAEFPSSGSNSVLNTPPTTPES(ph)PSSVTVTEGSR ddPTM_A459_MK2206_30min_R2 1 KAEFPSSGSNSVLNTPPTTPESPSSVTVTEGSR 33 1 Q4LE39-2;Q4LE39;H0Y7Y8;H7C5R6;Q4LE39-4;Q4LE39-3 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 KAEFPSSGSNSVLNTPPT(0.032)T(0.021)PES(0.928)PS(0.014)S(0.004)VT(0.002)VTEGSR 126.93 4.75E-25 8782600 39691 49313 42515 56480 47679 40618 49991 45502 40728 45655 TRUE FALSE 42729.77348 46864.18813 43932.42888 51865.40333 45806.88289 42163.74645 43427.12165 51449.26763 44270.44782 44165.28109 0.967496921 1.061109246 0.994727709 1.17434786 1.037169509 0.954680813 0.983286432 1.164925624 1.002381208 1 15.43062507 -8.473523344 24.99880822 0.99999652 1.043308136 0.049232514 0.072028876 1099.809364 557059.8612 0.070155556 0.018114087 3.36E-09 8.473523344 0.043311616 KAEGAATEEEGT(ph)PK ddPTM_A459_MK2206_30min_R1 2 KAEGAATEEEGTPK 14 1 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 KAEGAATEEEGT(1)PK;KAEGAATEEEGT(1)PK 155.03 0.00041535 30956000 12805 16891.3 14145.3 13075.5 8372.4 8778.3 12479.9 12128 16329.2 20695.5 TRUE FALSE 11715.86751 15791.6733 13185.15645 14082.57728 8038.909579 9275.31976 11647.38864 12021.96617 18026.67877 23259.41478 0.503704311 0.678936828 0.566873955 0.605457076 0.345619598 0.398777005 0.500760176 0.516864516 0.775027185 1 14.50552718 -8.480411287 2.478770993 0.998018449 0.513370844 0.752695029 0.090072633 0.144395526 1.988455935 0.09655828 0.026339756 3.31E-09 8.480411287 -0.484647604 KAEGAATEEEGT(ph)PK ddPTM_A459_MK2206_30min_R2 2 KAEGAATEEEGTPK 14 1 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 KAEGAATEEEGT(1)PK;KAEGAATEEEGT(1)PK 133.78 0.00087153 23315000 218513 131180 159810 114964 119170 96273 199428 135040 123170 170580 TRUE FALSE 235242.5233 124665.792 165137.9856 105571.0734 114490.787 99936.73648 173242.864 152690.1917 133883.104 165013.9886 1.425591402 0.755486205 1.000751434 0.639770448 0.693824736 0.605625846 1.049867745 0.925316653 0.811343966 1 17.3322288 -4.757477352 24.98805442 0.823784916 1.425592277 0.583012035 0.150650243 85.20764924 537320.0845 0.038649471 0.286297848 1.75E-05 4.757477352 0.601807361 KAEGEPQEES(ph)PLK ddPTM_A459_MK2206_30min_R1 7 KAEGEPQEESPLK 13 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK 157.47 6.62E-05 1292669000 50222.7 64758.8 62882.4 46641.3 36223.2 35413.3 46447.3 42360.6 63722.1 68784.1 TRUE FALSE 45950.99564 60542.99035 58614.11789 50233.62101 34780.35324 37418.37044 43348.88536 41990.24574 70346.24033 77305.5936 0.594407125 0.78316442 0.758213153 0.649805773 0.44990733 0.484031862 0.560747073 0.543172153 0.909976071 1 16.23828519 -8.366512597 4.325249174 0.991547698 0.60547552 0.659943627 0.101696798 0.155247567 4.589032641 0.112869244 0.029755778 4.30E-09 8.366512597 -0.386072179 KAEGEPQEES(ph)PLK ddPTM_A459_MK2206_30min_R2 8 KAEGEPQEESPLK 13 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK 147.37 0.00029527 2415732900 2433428 1841713 2101578 1734224 1683546 1186703 2370355 1884737 1273088 2278789 TRUE FALSE 2619733.119 1750256.211 2171643.562 1592532.352 1617441.525 1231863.814 2059124.541 2131078.597 1383818.893 2204432.302 1.188393546 0.793971404 0.985125994 0.722422889 0.733722475 0.558812268 0.934083818 0.966724447 0.627743883 1 21.07197574 -2.415982724 1.289312362 0.79832867 199.9999997 0.352101931 0.149089884 853.9052011 3.671619865 0.043126297 500632.6181 0.003837225 2.415982724 199.2016711 KAEGEPQEES(ph)PLKSK ddPTM_A459_MK2206_30min_R2 2 KAEGEPQEESPLKSK 15 2 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 KAEGEPQEES(0.999)PLKS(0.001)K;KAEGEPQEES(0.991)PLKS(0.009)K 73.918 0.047206 180108000 122415 170179 148663 145360 164045 87248 175710 134754 124413 155613 TRUE FALSE 131787.1865 161728.1583 153619.3502 133483.623 157603.769 90568.28378 152639.0659 152366.8105 135234.2179 150535.3606 0.875456677 1.07435328 1.020486812 0.886726033 1.046955137 0.601641259 1.013974825 1.012166244 0.89835516 1 17.19974289 -5.756940022 24.96185811 0.918924726 0.998524367 0.052961307 0.128140621 325.1507682 1803865.42 0.035032567 0.05815191 1.75E-06 5.756940022 0.079599641 KAEGEPQEESPLKS(ph)K ddPTM_A459_MK2206_30min_R1 1 KAEGEPQEESPLKSK 15 2 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 KAEGEPQEES(0.184)PLKS(0.816)K 82.755 0.028013 238260000 5577.7 6093.7 5747.8 5637.1 4711.7 4097.7 4695.5 5376.8 4401.3 3359.8 TRUE FALSE 5103.287325 5696.999022 5357.65535 6071.270419 4524.023012 4329.708233 4382.271762 5329.791204 4858.830885 3776.037389 1.351492795 1.508724209 1.418856541 1.607841712 1.198087451 1.146627479 1.160547768 1.411477339 1.286753913 1 11.88265733 -6.279161059 24.85972297 1.216456703 1.470594751 0.563837649 0.116327266 609.0975026 854431.1139 0.036395362 0.041355724 5.26E-07 6.279161059 0.254138048 KAELMGISTDIFPVDNSDTSS(ph)SVDGR ddPTM_A459_MK2206_30min_R1 1 KAELMGISTDIFPVDNSDTSSSVDGR 26 1 A0A0U1RRH6;O94880;O94880-2;B4DG57 A0A0U1RRH6 PHF14 PHD finger protein 14 1 KAELMGISTDIFPVDNS(0.011)DT(0.039)S(0.144)S(0.403)S(0.403)VDGR 100.55 9.43E-07 8105600 1364.8 1351.4 1056.4 1120 1392.9 1003.3 1057.3 1093.8 920.35 892.42 TRUE FALSE 1248.716593 1263.423614 984.6945113 1206.262594 1337.417843 1060.105979 986.7694462 1084.237022 1016.023676 1002.979727 1.245006813 1.259670141 0.981769107 1.202678939 1.333444543 1.056956537 0.983837878 1.08101589 1.013005197 1 9.97007673 -6.968028139 20.0477517 1.02538477 1.195112605 0.507576524 0.087740604 21.35098479 13387.18462 0.03230119 0.028485474 1.08E-07 6.968028139 0.169727835 KAEPS(ph)EVDMNSPK ddPTM_A459_MK2206_30min_R2 1 KAEPSEVDMNSPK 13 1 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KAEPS(0.966)EVDMNS(0.034)PK 143.58 0.0012839 30577000 31921 28125 28864 22508 22010 19814 34610 26997 18658 33101 TRUE FALSE 34364.8963 26728.3534 29826.31135 20669.0244 21145.77681 20568.03565 30065.66543 30525.60059 20280.83911 32020.91708 1.073201502 0.834715425 0.931463371 0.645485086 0.660373866 0.642331249 0.938938299 0.953301884 0.63336222 1 14.96672701 -4.32019865 1.27776938 0.78500074 1.585147333 0.25218367 0.140006914 5.709751599 3.654505008 0.042270271 7.985586417 4.78E-05 4.32019865 0.800146593 KAEPSEVDMNS(ph)PK ddPTM_A459_MK2206_30min_R1 6 KAEPSEVDMNSPK 13 1 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPS(0.221)EVDMNS(0.779)PK;KAEPSEVDMNS(1)PK 142.58 0.00039432 332339000 58996.5 80191.4 73661.3 69584.9 39215.3 39783.2 41164.1 45135.7 59554 48900.3 TRUE FALSE 53978.53787 74970.92528 68661.37619 74944.34105 37653.27156 42035.6904 38418.118 44741.08333 65744.85142 54958.43834 0.982170154 1.364138566 1.249332737 1.363654851 0.685122662 0.764863262 0.699039477 0.814089423 1.196264912 1 15.74605339 -6.258187155 24.99861051 0.837806565 1.249382882 0.532804872 0.17345912 215.3778258 1655524.899 0.052473801 0.064933209 5.52E-07 6.258187155 0.411576317 KAEPSEVDMNS(ph)PK ddPTM_A459_MK2206_30min_R2 6 KAEPSEVDMNSPK 13 1 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPS(0.016)EVDMNS(0.984)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK 127.91 0.00096468 392079000 974381 847443 868549 696728 831500 520529 1120409 795921 591407 1033684 TRUE FALSE 1048980.359 805360.2129 897505.9902 639803.0937 798851.132 540338.0958 973297.9524 899950.6075 642846.5118 999954.9757 1.04902759 0.805396475 0.897546402 0.639831902 0.798887101 0.540362425 0.973341776 0.899991129 0.642875457 1 19.93150361 -3.902891664 1.383491302 0.78540397 2.952886052 0.206274943 0.144549239 19.26090116 5.186236444 0.04031442 103.5545386 0.000125057 3.902891664 2.167482082 KAEPYETS(ph)QGK ddPTM_A459_MK2206_30min_R2 1 KAEPYETSQGK 11 1 Q86UE8-2;Q86UE8;J3KST4;J3KRK0;Q86UE8-3 Q86UE8-2 TLK2 Serine/threonine-protein kinase tousled-like 2 1 KAEPYET(0.348)S(0.652)QGK 80.102 0.047871 0 16777 22731 16095 16103 15278 13068 12168 15474 12521 14893 TRUE FALSE 18061.46002 21602.21159 16631.59927 14787.33339 14678.10895 13565.3119 10570.32698 17496.50493 13610.05395 14407.04263 1.25365493 1.499420259 1.154407583 1.026396171 1.018814849 0.941575051 0.733691657 1.214441116 0.944680619 1 13.8144866 -5.554843132 2.704285225 0.978951419 1.376589421 0.61068814 0.124802646 0.172743106 2.536286688 0.035145309 0.075725621 2.79E-06 5.554843132 0.397638001 KAEQGS(ph)EEEGEGEEEEEEGGESK ddPTM_A459_MK2206_30min_R1 4 KAEQGSEEEGEGEEEEEEGGESK 23 1 Q5STZ8;Q8NE71 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK 107.13 1.00E-05 182613000 21492 26004.1 25420.9 21281 15270.7 16271.6 17337.5 17101.5 23335.7 20760.5 TRUE FALSE 19663.99254 24311.22836 23695.40013 22920.06631 14662.43568 17192.88393 16180.94701 16951.98339 25761.52952 23332.46747 0.842773811 1.041948452 1.015554834 0.982325008 0.62841342 0.736865227 0.693494892 0.726540534 1.104106522 1 14.51005126 -6.215617899 23.78605214 0.7912581 0.978950877 0.207459258 0.144407214 332.5025737 172602.289 0.042454382 0.054808064 6.09E-07 6.215617899 0.187692776 KAEQGS(ph)EEEGEGEEEEEEGGESK ddPTM_A459_MK2206_30min_R2 6 KAEQGSEEEGEGEEEEEEGGESK 23 1 Q5STZ8;Q8NE71 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KAEQGS(0.998)EEEGEGEEEEEEGGES(0.002)K;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK 81.406 0.00025581 373616000 724472 579023 591747 515758 518359 381900 749440 621726 381995 682985 TRUE FALSE 779938.1333 550269.5598 611475.5496 473618.9216 498005.6211 396433.4721 651037.6278 702987.7229 415220.2346 660699.2554 1.180473759 0.832859361 0.925497561 0.716844945 0.753755384 0.600021067 0.985376663 1.064005623 0.628455733 1 19.33363419 -4.761202088 8.308510096 0.829957871 1.184147009 0.320097661 0.151344447 0.112056799 77.70817518 0.038053633 0.221886877 1.73E-05 4.761202088 0.354189138 KAGLAS(ph)PEEEDAVGKEPLK ddPTM_A459_MK2206_30min_R1 1 KAGLASPEEEDAVGKEPLK 19 2 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 KAGLAS(1)PEEEDAVGKEPLK 113.59 0.00059275 13218000 1822.9 2324.7 2371.2 1807.6 1401.6 1459 1641 1656.9 1705.4 1330.9 TRUE FALSE 1667.852783 2173.361607 2210.249551 1946.821665 1345.771304 1541.607319 1531.531884 1642.413898 1882.682433 1495.78194 1.115037385 1.452993615 1.477654925 1.301541096 0.899710893 1.030636404 1.023900505 1.098030304 1.258661027 1 10.54668415 -6.10834359 6.086234951 1.055291575 1.363698681 0.557432944 0.124573688 0.173707549 8.359885266 0.037725026 0.049153981 7.79E-07 6.10834359 0.308407106 KAGSEPET(ph)SRPSPLGSYSPIR ddPTM_A459_MK2206_30min_R1 1 KAGSEPETSRPSPLGSYSPIR 21 2 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 KAGSEPET(0.408)S(0.408)RPS(0.017)PLGS(0.084)YS(0.084)PIR 72.899 0.01382 10533000 1288.5 988.27 1169.4 1150.3 1353.6 1022.6 927.9 1087.2 1103.9 1056.1 TRUE FALSE 1178.906309 923.9334434 1090.024386 1238.896305 1299.683246 1080.498728 866.001484 1077.694725 1218.654355 1186.937641 0.993233568 0.778417847 0.918350171 1.043775395 1.09498865 0.910324764 0.729609926 0.90796238 1.026721466 1 10.21302843 -6.539350443 0.005891474 1.86313302 6.12E-06 0.016819583 0.109292799 68692.49861 136.3164582 21142.38491 21962.18881 2.89E-07 6.539350443 -1.863126904 KAGSEPETSRPSPLGSYS(ph)PIR ddPTM_A459_MK2206_30min_R1 1 KAGSEPETSRPSPLGSYSPIR 21 2 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 KAGSEPET(0.008)S(0.251)RPS(0.081)PLGS(0.073)Y(0.005)S(0.582)PIR 59.561 0.025135 8989600 1706.8 1681.2 1616.3 1436 2242.1 1722.6 1450.8 1702.3 1340.4 1005.4 TRUE FALSE 1561.627697 1571.753574 1506.590059 1546.600969 2152.792409 1820.132123 1354.019779 1687.416971 1479.739377 1129.956542 1.382024563 1.390985861 1.333316816 1.368726062 1.905199296 1.610798341 1.198293676 1.493346786 1.309554236 1 10.14205157 -8.835695823 0.980837093 0.999714774 1.473580598 0.378000682 0.180373493 1.26155321 2.197786159 0.18827525 0.061182795 1.46E-09 8.835695823 0.473865824 KAGTAT(ph)SPAGSSPAVAGGTQR ddPTM_A459_MK2206_30min_R2 1 KAGTATSPAGSSPAVAGGTQR 21 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KAGT(0.213)AT(0.494)S(0.292)PAGSSPAVAGGTQR 57.145 0.035253 3490100 10276 12330 11409 10870 12329 9852.3 14691 10279 6668.6 14885 TRUE FALSE 11062.73846 11717.71013 11789.37037 9981.886229 11844.90151 10227.23618 12762.05405 11622.50059 7248.622774 14399.30367 0.768282878 0.813769221 0.818745867 0.693220065 0.822602383 0.71025908 0.886296612 0.807157128 0.503400924 1 13.81371143 KAGTATS(ph)PAGSSPAVAGGTQR ddPTM_A459_MK2206_30min_R2 1 KAGTATSPAGSSPAVAGGTQR 21 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KAGT(0.001)AT(0.021)S(0.977)PAGS(0.001)SPAVAGGTQR 100.23 0.00014261 4648300 10016 8375 8518.9 9173.4 8269.1 8699.9 10095 9102.8 6520.5 9158.4 TRUE FALSE 10782.83266 7959.109678 8802.915874 8423.903876 7944.413585 9030.980791 8769.514374 10292.56721 7087.641304 8859.562158 1.217084148 0.898363772 0.993606198 0.950826206 0.896704989 1.019348432 0.989836091 1.161746713 0.799999049 1 13.11301969 -4.750408843 24.98135117 0.973230095 1.217084676 0.407127652 0.090024995 483.5259123 1094991.825 0.021383908 0.314489074 1.78E-05 4.750408843 0.243854581 KAGTQIENIDEDFR ddPTM_A459_MK2206_30min_R2 1 KAGTQIENIDEDFR 14 1 O43707;F5GXS2;O43707-3;K7EP19 O43707 ACTN4 Alpha-actinin-4 0 167.61 0.00028586 4454200 25992 27563 22913 29780 29345 24955 30761 20170 21158 27877 FALSE TRUE 27981.9675 26194.2615 23676.90798 27346.87874 28192.76785 25904.68001 26722.04375 22806.28825 22998.2846 26967.37577 1.037622931 0.971331498 0.877983389 1.014072669 1.045439797 0.960593282 0.990902636 0.845699205 0.852818783 1 14.71892752 -7.748710445 24.8192439 0.886944247 0.983202294 0.298601334 0.059344588 224.4112511 437565.6251 0.028390867 0.016251695 1.78E-08 7.748710445 0.096258048 KAIEKYSESLLCS(ph)NLES(ph)AT(ph)Y(ph)SNR ddPTM_A459_MK2206_30min_R1 1 KAIEKYSESLLCSNLESATYSNR 23 2 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 4 KAIEKY(0.001)S(0.001)ES(0.025)LLCS(0.977)NLES(0.842)AT(0.842)Y(0.817)S(0.496)NR 54.668 0.031498 0 1376.8 1418.7 1223.9 1346.5 1316.7 1028.5 1341.8 1437 1071.5 932.13 TRUE FALSE 1259.69593 1326.342372 1140.825078 1450.207663 1264.253051 1086.732781 1252.29097 1424.436461 1182.886259 1047.609302 1.202448211 1.266065861 1.088979523 1.384302011 1.20679823 1.037345487 1.195379774 1.359701998 1.129129206 1 10.03288506 -6.529415978 24.99913554 1.164660834 1.235720787 0.115196199 0.113669195 473.5769098 1810996.315 0.037688305 0.037780242 2.96E-07 6.529415978 0.071059953 KAKPAMPQDSVPS(ph)PR ddPTM_A459_MK2206_30min_R1 1 KAKPAMPQDSVPSPR 15 2 P53396 P53396 ACLY ATP-citrate synthase 1 KAKPAMPQDS(0.001)VPS(0.999)PR 80.541 0.032765 9766600 4711.7 4447.1 4489.9 4426.3 5500.6 3934.4 3665.1 4495.3 2880.4 2338.2 TRUE FALSE 4310.945173 4157.592982 4185.138098 4767.214393 5281.499454 4157.162328 3420.607866 4455.998066 3179.827888 2627.873869 1.640468831 1.582112837 1.592594739 1.814095589 2.00979945 1.581948958 1.30166364 1.695666645 1.210038246 1 11.35968032 -8.374269342 0.790260393 0.996094364 1.701065224 0.62709707 0.172034752 0.447173177 0.626075461 0.176828947 0.0673706 4.22E-09 8.374269342 0.704970859 KAKPAMPQDSVPS(ph)PR ddPTM_A459_MK2206_30min_R2 1 KAKPAMPQDSVPSPR 15 2 P53396 P53396 ACLY ATP-citrate synthase 1 KAKPAMPQDS(0.027)VPS(0.973)PR 50.938 0.047043 13348000 24337 46929 34477 49181 52848 43938 43743 36128 42797 44056 TRUE FALSE 26200.25943 44598.5741 35626.44597 45162.75498 50772.92198 45610.09138 37999.49156 40850.05365 46519.4057 42618.45633 0.61476322 1.046461509 0.83593938 1.059699456 1.191336486 1.070195763 0.891620552 0.958506177 1.091531926 1 15.37919072 -4.439575421 2.201655277 1.017452472 8.93E-15 0.586722573 0.099316457 2.214206991 4.571281406 0.027700579 6.430212039 3.63E-05 4.439575421 -1.017452472 KALDSNS(ph)LENDDLSAPGREPGHFNPESR ddPTM_A459_MK2206_30min_R2 2 KALDSNSLENDDLSAPGREPGHFNPESR 28 2 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 KALDS(0.247)NS(0.751)LENDDLS(0.002)APGREPGHFNPESR;KALDS(0.228)NS(0.772)LENDDLS(0.001)APGREPGHFNPESR 59.561 0.0018761 15573000 17157 24283 23174.4 22906 27381 18733.9 22079.5 19586.6 23341.8 16726.6 TRUE FALSE 18470.55311 23077.14153 23947.02293 21034.50653 26305.88436 19446.83169 19180.43513 22146.63587 25372.02757 16180.81241 1.141509625 1.426204133 1.47996419 1.299966033 1.625745586 1.201845198 1.185381465 1.3686974 1.568031748 1 13.98199642 KALVVPEPEPDSDS(ph)NQER ddPTM_A459_MK2206_30min_R1 5 KALVVPEPEPDSDSNQER 18 1 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 RNF20 E3 ubiquitin-protein ligase BRE1A 1 KALVVPEPEPDS(0.11)DS(0.89)NQER;KALVVPEPEPDS(0.242)DS(0.758)NQER;KALVVPEPEPDS(0.015)DS(0.985)NQER;KALVVPEPEPDS(0.026)DS(0.974)NQER;KALVVPEPEPDS(0.362)DS(0.638)NQER 179.17 8.38E-10 58671500 18696.5 19601.7 22334 20523.7 24437 18448.1 18661.6 20485.1 14932.2 12714.8 TRUE FALSE 17106.2645 18325.62577 20818.03031 22104.43893 23463.62254 19492.61548 17416.71871 20306.00093 16484.45563 14290.00542 1.197078937 1.282408595 1.456824522 1.546846085 1.641960367 1.364073344 1.218804207 1.420993228 1.153565387 1 13.80271884 -8.478348682 0.990878174 0.997067013 1.414228734 0.481861752 0.133149424 0.536735381 1.16253315 0.139974686 0.047064098 3.32E-09 8.478348682 0.417161721 KALVVPEPEPDSDS(ph)NQER ddPTM_A459_MK2206_30min_R2 5 KALVVPEPEPDSDSNQER 18 1 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 RNF20 E3 ubiquitin-protein ligase BRE1A 1 KALVVPEPEPDS(0.034)DS(0.966)NQER;KALVVPEPEPDS(0.084)DS(0.916)NQER;KALVVPEPEPDS(0.079)DS(0.921)NQER;KALVVPEPEPDS(0.092)DS(0.908)NQER;KALVVPEPEPDS(0.145)DS(0.855)NQER 180.03 7.36E-10 89840800 283413.3 464667 432176 494602 510914 491567 483801 402506 452486 356399 TRUE FALSE 305111.6402 441592.3125 446584.5321 454191.4344 490852.9492 510273.9266 420277.3476 455114.9162 491842.4144 344769.7298 0.88497224 1.280832609 1.295312475 1.317376194 1.423712428 1.480042714 1.219008838 1.32005474 1.426582359 1 18.39527359 -4.741695766 3.426542556 1.327453904 0.805230778 0.493639399 0.127540808 0.286369403 5.020932195 0.030624428 0.415019345 1.81E-05 4.741695766 -0.522223126 KAMGISIPS(ph)PVMENNFVDLTEDTEEPK ddPTM_A459_MK2206_30min_R1 2 KAMGISIPSPVMENNFVDLTEDTEEPK 27 1 Q9NPI1-2;Q9NPI1;I3L4V5 Q9NPI1-2 BRD7 Bromodomain-containing protein 7 1 KAMGIS(0.013)IPS(0.983)PVMENNFVDLT(0.002)EDT(0.002)EEPK;KAMGIS(0.003)IPS(0.997)PVMENNFVDLTEDTEEPK 84.312 3.55E-05 10912100 2111.45 2023.46 2122.89 1620.4 1822.97 1537.54 2035.58 2008.88 1917.34 1906.43 TRUE FALSE 1931.86009 1891.732386 1978.794142 1745.203489 1750.357245 1624.594186 1899.790172 1991.316574 2116.654354 2142.612941 0.90163746 0.882909064 0.923542514 0.814521118 0.816926478 0.758230362 0.886669793 0.929386981 0.987884612 1 11.06515554 -7.927429569 2.160561224 0.9930911 0.850525473 0.609902404 0.045450387 0.247768243 2.187411122 0.039887161 0.014379659 1.18E-08 7.927429569 -0.142565627 KANNSQEPS(ph)PQLASSVASTR ddPTM_A459_MK2206_30min_R2 2 KANNSQEPSPQLASSVASTR 20 1 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 KANNSQEPS(1)PQLASSVASTR;KANNS(0.001)QEPS(0.993)PQLAS(0.003)S(0.003)VASTR 98.533 0.00044767 22081800 45055 59465 51061 73228 62257 53804 61938 55496 63379 65933 TRUE FALSE 48504.44544 56512.05457 52763.34826 67245.03816 59812.47736 55851.54892 53805.4662 62749.51775 68891.59086 63781.61161 0.76047695 0.88602425 0.827250158 1.054301333 0.937769929 0.875668512 0.843589004 0.983818316 1.08011681 1 15.96085293 -3.392191208 0.545634856 0.963541001 3.36E-38 0.404770305 0.076075455 19.38239537 1.345432938 0.041689342 16.58045804 0.00040533 3.392191208 -0.963541001 KAPAGPSLEETSVS(ph)SPK ddPTM_A459_MK2206_30min_R2 1 KAPAGPSLEETSVSSPK 17 1 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 KAPAGPSLEETS(0.001)VS(0.511)S(0.488)PK 87.554 0.0054237 18512000 143190 128000 161470 115480 133600 89337 157340 109630 109270 162140 TRUE FALSE 154152.7365 121643.7061 166853.3292 106044.9146 128354.1927 92736.78214 136681.069 123959.0174 118774.1071 156849.3851 0.982807401 0.77554468 1.063780576 0.676093914 0.818327676 0.591247343 0.871416033 0.790306046 0.757249428 1 17.25902035 -5.77127076 24.99985465 0.774384113 0.924194285 0.241931131 0.122887152 270.3912569 687568.6115 0.032489058 0.048855832 1.69E-06 5.77127076 0.149810172 KAPAGPSLEETSVSS(ph)PK ddPTM_A459_MK2206_30min_R1 2 KAPAGPSLEETSVSSPK 17 1 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 KAPAGPSLEETSVS(0.097)S(0.903)PK;KAPAGPSLEETSVS(0.008)S(0.992)PK 173.56 1.96E-07 88444000 17534.1 20762.1 21916 20295 12185.5 11866.3 14638.3 13432.9 18464.4 17559.2 TRUE FALSE 16042.73272 19410.48352 20428.40298 21858.12442 11700.12573 12538.15965 13661.80572 13315.45757 20383.84046 19734.56626 0.812925529 0.983577914 1.035158448 1.107606021 0.592874734 0.635340016 0.692277982 0.674727653 1.032900353 1 14.26843719 -6.256830014 24.99823183 0.744335393 0.988324291 0.305787823 0.154343294 442.0112177 2397182.017 0.046403478 0.057907287 5.54E-07 6.256830014 0.243988898 KAPAGPSLEETSVSS(ph)PK ddPTM_A459_MK2206_30min_R2 3 KAPAGPSLEETSVSSPK 17 1 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 KAPAGPSLEETS(0.005)VS(0.03)S(0.964)PK;KAPAGPSLEETSVS(0.229)S(0.771)PK;KAPAGPSLEETSVS(0.008)S(0.992)PK 156.29 2.41E-05 102003000 547890 616830 634500 573550 631750 439110 719700 525900 501160 715080 TRUE FALSE 589836.8797 586199.1192 655653.9133 526689.1303 606944.3207 455820.6387 625202.5255 594636.9357 544749.9909 691746.9982 0.85267718 0.847418378 0.947823287 0.761389831 0.877407957 0.65894126 0.903802296 0.859616214 0.787498887 1 19.39988495 -10.80054808 4.828444646 1.000054092 0.833709562 0.298626727 0.076793795 4.36E-05 6.52E-06 0.072434578 0.01756226 1.58E-11 10.80054808 -0.16634453 KAPAGQEEPGT(ph)PPS(ph)SPLSAEQLDR ddPTM_A459_MK2206_30min_R1 1 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 2 KAPAGQEEPGT(1)PPS(0.863)S(0.113)PLS(0.024)AEQLDR 108.09 7.14E-07 8598900 2297 2213.6 2317.3 2090.9 2327.8 1786.6 2258.4 2209.8 1743.2 1681.3 TRUE FALSE 2101.628088 2069.494238 2160.008132 2251.94148 2235.078797 1887.755748 2107.746257 2190.479952 1924.411878 1889.592137 1.112212549 1.095206842 1.143108129 1.191760611 1.182836631 0.999028156 1.115450374 1.159234265 1.01842712 1 10.88385915 -6.743343328 24.99988761 1.071943996 1.14474721 0.372472654 0.054813898 328.6330457 454009.2475 0.018796049 0.018762059 1.81E-07 6.743343328 0.072803215 KAPAGQEEPGT(ph)PPS(ph)SPLSAEQLDR ddPTM_A459_MK2206_30min_R2 2 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 2 KAPAGQEEPGT(1)PPS(0.607)S(0.373)PLS(0.021)AEQLDR;KAPAGQEEPGT(1)PPS(0.625)S(0.348)PLS(0.027)AEQLDR 104.83 9.59E-07 47567000 66254 85670 68380 87050 91215 84329 97540 70761 78018 86603 TRUE FALSE 71326.45718 81415.75238 70659.75507 79937.73654 87633.44078 87538.19919 84732.88083 80009.70566 84803.86462 83777.1512 0.851383177 0.971813331 0.843425135 0.9541711 1.046030326 1.044893481 1.011407999 0.955030155 1.012255292 1 16.35426921 -6.000953189 6.345117919 1.010295019 0.896937555 0.650470242 0.040249953 0.093664842 17.56883326 0.011592695 0.01638781 9.98E-07 6.000953189 -0.113357465 KAPAGQEEPGT(ph)PPSS(ph)PLSAEQLDR ddPTM_A459_MK2206_30min_R1 1 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 2 KAPAGQEEPGT(1)PPS(0.293)S(0.671)PLS(0.036)AEQLDR 95.674 1.62E-05 5722400 1469 1287.8 1517.6 1152.8 1600.7 1266.4 1478.1 1299 1467.1 1190 TRUE FALSE 1344.053836 1203.963986 1414.58954 1241.588856 1536.940729 1338.102474 1379.498646 1287.64298 1619.610295 1337.426184 1.004955527 0.900209672 1.057695413 0.928341968 1.149177987 1.000505665 1.031457782 0.962776859 1.210990419 1 10.38524355 -6.234863373 24.86220105 1.052973349 0.973679492 0.216633962 0.079920128 1187.852692 1111251.924 0.022496657 0.029034455 5.82E-07 6.234863373 -0.079293857 KAPAGQEEPGT(ph)PPSS(ph)PLSAEQLDR ddPTM_A459_MK2206_30min_R2 3 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 2 KAPAGQEEPGT(1)PPS(0.272)S(0.68)PLS(0.048)AEQLDR;KAPAGQEEPGT(1)PPS(0.27)S(0.701)PLS(0.029)AEQLDR;KAPAGQEEPGT(1)PPS(0.294)S(0.689)PLS(0.016)AEQLDR 113.75 2.87E-07 27530000 68082 82300 69475 80537 89993 78899 88053 68856 77778 72662 TRUE FALSE 73294.41027 78213.10168 71791.26182 73956.86947 86459.42264 81901.55673 76491.53533 77855.71562 84542.98985 70291.04489 1.042727568 1.112703642 1.021342931 1.052152086 1.23002045 1.165177682 1.08821167 1.107619267 1.202756197 1 16.10105328 KAPAGQEEPGT(ph)PPSSPLSAEQLDR ddPTM_A459_MK2206_30min_R1 4 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 1 KAPAGQEEPGT(0.96)PPS(0.014)S(0.02)PLS(0.006)AEQLDR;KAPAGQEEPGT(0.951)PPS(0.024)S(0.024)PLS(0.001)AEQLDR;KAPAGQEEPGT(0.998)PPS(0.001)SPLSAEQLDR;KAPAGQEEPGT(1)PPSSPLSAEQLDR 149.91 1.45E-09 257756000 14309.8 14633.6 15837.9 14069.8 15863.7 13792.7 14706.8 14373 12734.6 10935.1 TRUE FALSE 13092.67637 13680.94998 14762.86747 15153.45843 15231.81524 14573.63075 13725.73621 14247.33838 14058.40724 12289.82274 1.065326705 1.113193434 1.201227046 1.233008706 1.239384453 1.185829207 1.116837606 1.159279403 1.143906428 1 13.58517649 -9.269679314 0.802087999 0.997591704 1.17132961 0.473222717 0.051760266 2.982939883 2.43531551 0.075217631 0.019674467 5.37E-10 9.269679314 0.173737907 KAPAGQEEPGT(ph)PPSSPLSAEQLDR ddPTM_A459_MK2206_30min_R2 4 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 1 KAPAGQEEPGT(0.998)PPS(0.002)SPLSAEQLDR;KAPAGQEEPGT(0.995)PPS(0.005)SPLSAEQLDR;KAPAGQEEPGT(0.632)PPS(0.335)S(0.033)PLS(0.001)AEQLDR;KAPAGQEEPGT(1)PPSSPLSAEQLDR 134.11 1.19E-07 339668000 255901 303350 286621 338165 325105 287279 300394 235121 285663 328345 TRUE FALSE 275492.9773 288286.0801 296176.8011 310535.8378 312339.7442 298211.6037 260951.907 265852.122 310509.4514 317631.1295 0.867336201 0.907612804 0.932455208 0.97766185 0.9833411 0.93886139 0.821556462 0.836983838 0.977578778 1 18.27699279 -6.638551791 0.004683816 1.838973547 2.78E-07 0.070194225 0.058562425 70273.79245 118.3069055 22896.88738 23549.44963 2.30E-07 6.638551791 -1.838973268 KAPAPPVLS(ph)PK ddPTM_A459_MK2206_30min_R1 2 KAPAPPVLSPK 11 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 KAPAPPVLS(1)PK;KAPAPPVLS(1)PK 74.296 0.028464 33194000 15314.6 18126 18856.5 15776.2 12623.2 11975 14418.1 14725 18630.9 18816.2 TRUE FALSE 14012.01285 16945.99411 17576.57332 16991.28566 12120.39121 12653.01415 13456.29486 14596.26088 20567.64873 21147.29291 0.662591326 0.801331602 0.831150039 0.803473321 0.573141502 0.598327843 0.63631288 0.690218882 0.972590147 1 14.36818537 -8.275724049 6.685897115 0.98986041 0.700900355 0.65112666 0.08396244 0.115965377 26.02283515 0.083134164 0.024380285 5.30E-09 8.275724049 -0.288960054 KAPAPPVLS(ph)PK ddPTM_A459_MK2206_30min_R2 2 KAPAPPVLSPK 11 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 KAPAPPVLS(1)PK;KAPAPPVLS(1)PK 89.232 0.015158 51858000 409780 374280 387350 318250 366640 278250 447450 348080 306940 520160 TRUE FALSE 441153.0719 355693.7995 400264.0557 292247.957 352243.8714 288838.9987 388699.2775 393575.2511 333637.0864 503187.2218 0.876717557 0.706881622 0.795457512 0.580793677 0.70002547 0.574018946 0.77247446 0.782164638 0.663047613 1 18.94073576 -10.56009802 4.921707541 1.000002485 0.713722377 0.469693551 0.090207335 5.17E-06 1.01E-06 0.087239631 0.021158332 2.75E-11 10.56009802 -0.286280108 KAPAPVT(ph)PPAPVQNK ddPTM_A459_MK2206_30min_R2 1 KAPAPVTPPAPVQNK 15 1 Q03468;P0DP91 Q03468 ERCC6 DNA excision repair protein ERCC-6 1 KAPAPVT(1)PPAPVQNK 87.85 0.022754 6930300 60221 62783 45871 73911 65629 60025 67924 56051 43706 52340 TRUE FALSE 64831.56606 59665.28752 47400.31625 67872.23487 63052.0757 62309.29344 59005.49721 63377.05815 47507.46888 50632.15009 1.280442682 1.178407147 0.936170322 1.340496794 1.245297219 1.230627049 1.165376092 1.251715719 0.938286618 1 15.62776613 -8.264691339 24.96508694 0.969143279 1.199399125 0.455153774 0.102512131 269.8340029 2071445.447 0.087607107 0.026268795 5.44E-09 8.264691339 0.230255846 KAPLNIPGT(ph)PVLEDFPQNDDEKER ddPTM_A459_MK2206_30min_R2 2 KAPLNIPGTPVLEDFPQNDDEKER 24 2 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 KAPLNIPGT(1)PVLEDFPQNDDEKER;KAPLNIPGT(1)PVLEDFPQNDDEKER 63.606 0.0048729 8667400 59725 64087 54554 58987 65898 44877 62466 45367 43490 62360 TRUE FALSE 64297.59192 60904.53277 56372.80313 54167.57341 63310.51341 46584.82568 54264.13916 51296.62267 47272.68159 60325.19831 1.065849657 1.009603524 0.934481854 0.897926156 1.049487033 0.772228306 0.899526909 0.85033492 0.78363077 1 15.88047313 -6.756979272 24.99999888 0.854189034 0.984114231 0.42600143 0.0751818 111.8186856 626771.2198 0.02480023 0.023995867 1.75E-07 6.756979272 0.129925198 KAPPPPIS(ph)PTQLSDVSSPR ddPTM_A459_MK2206_30min_R1 2 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 KAPPPPIS(0.999)PT(0.001)QLSDVSSPR;KAPPPPIS(0.973)PT(0.027)QLSDVSSPR 213.82 2.92E-17 91533000 10766.6 10839 10608.2 9256 10163.8 9036.4 9642.3 9311.5 7684.1 7232.2 TRUE FALSE 9850.844132 10133.37913 9888.14494 9968.898724 9758.954324 9548.033159 8999.07976 9230.090537 8482.889693 8128.179536 1.211937321 1.246697257 1.216526394 1.226461433 1.20063223 1.174682857 1.107145791 1.135566764 1.043639557 1 12.98871655 -7.772829312 0.566681887 0.998071515 1.236362605 0.944348287 0.0185885 0.159717083 0.111400495 0.0174026 0.010361195 1.69E-08 7.772829312 0.23829109 KAPPPPIS(ph)PTQLSDVSSPR ddPTM_A459_MK2206_30min_R2 4 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 KAPPPPIS(0.966)PT(0.022)QLS(0.011)DVSSPR;KAPPPPIS(0.826)PT(0.168)QLS(0.005)DVSSPR;KAPPPPIS(0.758)PT(0.238)QLS(0.004)DVSSPR;KAPPPPIS(0.856)PT(0.132)QLS(0.009)DVS(0.002)S(0.002)PR 186.68 1.25E-15 123519600 187884 255063 214103 244508 199288 211428 197592 185446 199303 190537 TRUE FALSE 202268.5435 242396.9423 221241.0872 224530.9143 191462.9518 219474.0407 171647.933 209684.4289 216638.0147 184319.7933 1.097378311 1.315089052 1.200311064 1.218159538 1.038754158 1.190724212 0.931250681 1.13761211 1.175337769 1 17.49185148 -6.24930748 23.81663848 1.084031191 1.214872451 0.332718164 0.088946852 470.8450654 924333.6532 0.025484198 0.032615903 5.63E-07 6.24930748 0.130841259 KAPPPPISPTQLS(ph)DVSSPR ddPTM_A459_MK2206_30min_R2 1 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 KAPPPPISPT(0.014)QLS(0.837)DVS(0.109)S(0.039)PR 112.37 0.00029529 15080000 104560 134910 138890 156480 150020 155560 155390 126820 143990 152550 TRUE FALSE 112565.194 128210.5656 143520.5233 143695.0834 144129.461 161479.9448 134987.1063 143395.8094 156513.9899 147572.306 0.762779935 0.86879828 0.972543746 0.973726625 0.976670115 1.094242878 0.914718418 0.971698643 1.060591883 1 17.17106248 -4.809438512 1.193982287 0.999954877 0.65420627 0.72937751 0.046460236 0.768539699 0.95961593 0.014325533 0.328756365 1.55E-05 4.809438512 -0.345748606 KAPPPPISPTQLSDVS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 KAPPPPIS(0.002)PT(0.218)QLS(0.218)DVS(0.281)S(0.281)PR 60.472 0.020057 12983000 2171.1 2615.3 2386.9 1983.5 2072 2216.3 2616.9 2188.2 2339.6 2636.6 TRUE FALSE 1986.436544 2445.043495 2224.883878 2136.269514 1989.467852 2341.784991 2442.331376 2169.068798 2582.809792 2963.241913 0.670359222 0.825124497 0.750827622 0.720923089 0.671382192 0.790278033 0.824209244 0.731991805 0.871616246 1 11.53296069 -8.78385474 0.726265366 1.003667617 0.739878871 0.697397071 0.05248511 0.61640215 0.654055749 0.053885224 0.019619569 1.64E-09 8.78385474 -0.263788746 KAPPPPISPTQLSDVS(ph)SPR ddPTM_A459_MK2206_30min_R2 1 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 KAPPPPISPTQLS(0.001)DVS(0.5)S(0.5)PR 132.24 0.00012892 14623000 48892 64895 67377 72055 43374 55958 53478 35839 37042 48872 TRUE FALSE 52635.20911 61672.40867 69623.31555 66167.87601 41670.91882 58087.5209 46456.27436 40523.28035 40263.8462 47277.31064 1.113329172 1.304482168 1.472658123 1.399569373 0.881414748 1.228655355 0.982633609 0.857140133 0.851652635 1 15.52886035 -6.721775148 1.049728888 0.908306342 1.321020156 0.536717442 0.148894521 0.4019727 0.948788792 0.084468773 0.079705108 1.90E-07 6.721775148 0.412713814 KAPPPPISPTQLSDVSS(ph)PR ddPTM_A459_MK2206_30min_R1 1 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 KAPPPPISPTQLS(0.01)DVS(0.186)S(0.803)PR 95.742 0.00087203 13567000 4101.3 3993.8 4139.7 3160.3 3410.5 2971.2 3141.3 2328.6 3025.6 2549.1 TRUE FALSE 3752.462898 3733.802894 3858.708698 3403.706854 3274.652563 3139.426776 2931.749609 2308.241296 3340.121947 2864.901753 1.30980509 1.303291776 1.346890411 1.188071057 1.143024385 1.095823539 1.023333385 0.805696493 1.165876611 1 11.48426995 -6.452225055 1.009290878 0.983412051 1.325088148 0.697999408 0.086573891 0.280032078 0.611499787 0.041713721 0.052499065 3.53E-07 6.452225055 0.341676096 KAPS(ph)SPPPPPPPLR ddPTM_A459_MK2206_30min_R2 1 KAPSSPPPPPPPLR 14 1 Q13796 Q13796 SHROOM2 Protein Shroom2 1 KAPS(0.5)S(0.5)PPPPPPPLR 93.649 0.0072737 11753000 41251 41274 41319 46171 48683 48642 43803 33759 39309 45736 TRUE FALSE 44409.20828 39224.39318 42696.55484 42398.68161 46771.46081 50493.1054 38051.61348 38171.41721 42728.02577 44243.63807 1.003742238 0.886554427 0.96503264 0.958300073 1.057134152 1.141251208 0.86004712 0.862754938 0.965743949 1 15.4331824 KAPSS(ph)PPPPPPPLR ddPTM_A459_MK2206_30min_R2 1 KAPSSPPPPPPPLR 14 1 Q13796 Q13796 SHROOM2 Protein Shroom2 1 KAPS(0.055)S(0.945)PPPPPPPLR 108.25 0.0025384 12477000 54603 51081 55343 54620 47612 47920 56663 42561 43916 51449 TRUE FALSE 58783.44766 48544.39182 57188.108 50157.37128 45742.51365 49743.62918 49223.08004 48123.86883 47735.7343 49770.22334 1.181096722 0.975370182 1.149042623 1.007778706 0.919073908 0.999465661 0.989006613 0.966920894 0.959122365 1 15.60299524 -5.947341864 7.006345777 0.971941012 1.088397341 0.525314301 0.054666085 0.169202146 17.93932677 0.014388522 0.021388568 1.13E-06 5.947341864 0.116456329 KAPWIPPNPTS(ph)PPASPK ddPTM_A459_MK2206_30min_R2 2 KAPWIPPNPTSPPASPK 17 1 Q2KHM9;Q2KHM9-2 Q2KHM9 KIAA0753 Uncharacterized protein KIAA0753 1 KAPWIPPNPT(0.344)S(0.656)PPAS(0.001)PK;KAPWIPPNPT(0.186)S(0.574)PPAS(0.24)PK 82.189 0.0075215 11884600 58166 71142 73750 82181 78092 69041 94253 56488 71574 70393 TRUE FALSE 62619.23368 67609.19173 76208.78819 75466.54942 75025.7157 71668.40363 81877.46788 63871.17555 77799.37714 68096.08217 0.919571753 0.992849949 1.119136164 1.108236289 1.101762588 1.052460015 1.202381477 0.937956686 1.142494174 1 16.05528418 -5.027392233 3.423557486 1.08527374 0.925836023 0.362658187 0.070223141 0.235019246 5.53625572 0.0170905 0.070774355 9.39E-06 5.027392233 -0.159437717 KAQAVS(ph)EEEEEEEGK ddPTM_A459_MK2206_30min_R1 1 KAQAVSEEEEEEEGK 15 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 KAQAVS(1)EEEEEEEGK 156.57 0.00029128 5541700 1079.3 1377 1267.6 1133.7 841.87 856.8 951.47 1129.6 1353.7 1301.1 TRUE FALSE 987.4998674 1287.35705 1181.558844 1221.01777 808.3365352 905.3112756 887.9991724 1119.724026 1494.421959 1462.290091 0.67531051 0.880370494 0.808019456 0.835003792 0.552788082 0.619105116 0.607266081 0.76573317 1.021973662 1 10.51401383 -8.210150281 4.368303719 1.014740156 0.715119123 0.581576097 0.100049828 0.162691587 6.493943023 0.087776249 0.02900516 6.16E-09 8.210150281 -0.299621032 KAQAVS(ph)EEEEEEEGK ddPTM_A459_MK2206_30min_R2 4 KAQAVSEEEEEEEGK 15 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 KAQAVS(1)EEEEEEEGK;KAQAVS(1)EEEEEEEGK;KAQAVS(1)EEEEEEEGK;KAQAVS(1)EEEEEEEGK 188.44 5.58E-14 7181500 80576 54619 60660 55850 55375 38238.2 83247 63317 30729.8 73825 TRUE FALSE 86744.96051 51906.69988 62682.37412 51286.87634 53200.69926 39693.3815 72316.5689 71592.7493 33402.62246 71416.0963 1.214641587 0.726820739 0.877706531 0.718141694 0.744939895 0.555804413 1.012608819 1.002473574 0.467718402 1 16.12396166 -4.756378439 24.9921113 0.788447399 1.214642247 0.339454651 0.177876579 182.8219851 902715.8703 0.04308635 0.350735751 1.75E-05 4.756378439 0.426194848 KAS(ph)AQASLASK ddPTM_A459_MK2206_30min_R1 1 KASAQASLASK 11 1 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 KAS(0.984)AQAS(0.01)LAS(0.006)K 106.76 0.01964 9625600 3308.1 3800.9 3128.8 2553.7 2481.2 1876.3 2085.4 1888.8 1278.4 1493.2 TRUE FALSE 3026.728723 3553.460719 2916.425773 2750.386416 2382.36855 1982.534485 1946.286771 1872.286421 1411.294255 1678.188889 1.803568563 2.117437877 1.737841188 1.638901577 1.419606914 1.181353599 1.159754294 1.11565893 0.840962697 1 10.71268939 -6.338781346 0.713165754 0.968993917 2.021951909 0.926303651 0.105422037 0.179159614 0.198907403 0.064099975 0.105155356 4.58E-07 6.338781346 1.052957992 KAS(ph)AQASLASK ddPTM_A459_MK2206_30min_R2 2 KASAQASLASK 11 1 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 KAS(1)AQASLASK;KAS(1)AQASLASK 126.56 0.0056289 14391900 40122 50630 44919 45816 34368 31760 23374 18111.1 20200 19024.8 TRUE FALSE 43193.77117 48115.78782 46416.57704 42072.68624 33018.53963 32968.64906 20304.96572 20478.28295 21956.95949 18404.02233 2.346974503 2.614416944 2.522088715 2.286059291 1.794093652 1.7913828 1.103289561 1.112706917 1.193052208 1 14.16773349 -6.714533273 0.938867949 1.049341664 2.541439304 0.954355738 0.129618148 0.104338116 0.199454838 0.076084433 0.073475584 1.93E-07 6.714533273 1.49209764 up KAS(ph)AVNMEK ddPTM_A459_MK2206_30min_R1 1 KASAVNMEK 9 1 P53355-4;P53355;P53355-3 P53355-4 DAPK1 Death-associated protein kinase 1 1 KAS(1)AVNMEK 106.49 0.02359 16369000 2765 2810.7 2899.6 2559.9 2020.5 1678.4 2253.1 2206.5 620.83 1386.7 TRUE FALSE 2529.82223 2627.722919 2702.783231 2757.063942 1940.019207 1773.429558 2102.79981 2187.208803 685.3675002 1558.494865 1.623247075 1.686064534 1.734226587 1.769055518 1.244803079 1.13791171 1.349250394 1.403410978 0.439762437 1 10.60593769 -7.016180251 0.582691337 0.87030798 1.752859698 0.614560586 0.242008392 0.602537255 0.433273302 0.216023141 0.199372645 9.63E-08 7.016180251 0.882551717 KAS(ph)GPPVSELITK ddPTM_A459_MK2206_30min_R2 1 KASGPPVSELITK 13 1 P10412;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 1 KAS(1)GPPVSELITK 80.238 0.019239 7678600 46909 66720 65513 61753 65603 54750 84088 69221 60273 60923 TRUE FALSE 50500.38911 63406.78182 67697.17072 56707.58236 63027.09659 56833.54962 73047.14459 78268.42237 65515.43659 58935.0875 0.85688155 1.075874908 1.148673457 0.962204092 1.069432477 0.964341482 1.239450855 1.32804456 1.111654184 1 15.84683919 -7.264534753 24.98195076 1.197124451 1.0222004 0.315625049 0.109763207 297.8599338 2403933.057 0.043532534 0.030774742 5.44E-08 7.264534753 -0.174924051 KAS(ph)GS(ph)ENEGDYNPGR ddPTM_A459_MK2206_30min_R2 1 KASGSENEGDYNPGR 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 KAS(0.962)GS(0.625)ENEGDY(0.413)NPGR 99.711 0.045795 0 37083 45006 41880 39429 33859 32990 36250 29118 28962 31462 TRUE FALSE 39922.10299 42771.06748 43276.2583 36207.52457 32529.52553 34245.45757 31490.33146 32923.82258 31481.06241 30435.39752 1.311699739 1.405306682 1.421905473 1.189651772 1.068805673 1.125185158 1.034661415 1.081760886 1.034356867 1 14.89346259 -5.964165792 2.968515296 1.064593487 1.382525714 0.917160047 0.043160412 0.066459882 1.197794586 0.013000044 0.019787128 1.09E-06 5.964165792 0.317932226 KAS(ph)GSENEGDY(ph)NPGR ddPTM_A459_MK2206_30min_R2 1 KASGSENEGDYNPGR 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 KAS(0.549)GS(0.549)ENEGDY(0.901)NPGR 90.229 0.046568 0 17811 17157 17933 17844 15172 13683 19247 14928 9895.3 17878 TRUE FALSE 19174.62385 16305.00833 18530.87727 16386.08812 14576.27105 14203.71615 16719.84578 16879.14086 10755.97531 17294.64232 1.108703117 0.942778002 1.071480804 0.947466147 0.842820035 0.821278399 0.966764473 0.975975134 0.621925282 1 14.07803756 -5.992745312 4.216696617 0.873363609 1.030333132 0.32700811 0.1085595 0.25713882 10.95832471 0.031078949 0.044935147 1.02E-06 5.992745312 0.156969523 KAS(ph)GSENEGDYNPGR ddPTM_A459_MK2206_30min_R2 2 KASGSENEGDYNPGR 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KAS(0.859)GS(0.141)ENEGDYNPGR;KAS(0.609)GS(0.391)ENEGDYNPGR 80.361 0.015057 45796000 18311.9 33920 24175 31148 23435.7 26816 33828 27681 23906.5 26107.4 TRUE FALSE 19713.87314 32235.58212 24980.98243 28603.10876 22515.49666 27836.50167 29386.34297 31299.00174 25985.84416 25255.51768 0.780576878 1.276377801 0.989129693 1.1325489 0.891508024 1.102194856 1.163561299 1.239293613 1.028917502 1 14.62431099 -6.982544748 24.98888693 1.128597684 1.030109152 0.087131115 0.139372752 561.3017728 803555.4447 0.046573943 0.041065308 1.04E-07 6.982544748 -0.098488531 KAS(ph)GSENEGDYNPGRK ddPTM_A459_MK2206_30min_R2 3 KASGSENEGDYNPGRK 16 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KAS(0.792)GS(0.208)ENEGDYNPGRK;KAS(0.984)GS(0.016)ENEGDYNPGRK;KAS(0.95)GS(0.04)ENEGDY(0.011)NPGRK 82.586 0.022395 16900700 17885.6 32623 28389.3 32204.5 28903.7 28216.3 28094.7 18269.2 26383.9 17937 TRUE FALSE 19254.93529 31002.98926 29335.78509 29573.28933 27768.79551 29290.09107 24405.83214 20657.04717 28678.72393 17351.71716 1.109684714 1.786738971 1.690656021 1.704343672 1.600348557 1.68802262 1.406536997 1.190490081 1.652788809 1 14.08279082 -9.103757374 0.459826834 0.965799264 1.612452954 0.348829498 0.218483707 2.500517403 0.922233164 0.444947066 0.127390923 7.87E-10 9.103757374 0.64665369 KAS(ph)PEAASTPR ddPTM_A459_MK2206_30min_R1 3 KASPEAASTPR 11 1 P29590-2;P29590;P29590-9;P29590-8;P29590-5;P29590-3;P29590-4;P29590-12;P29590-13;P29590-11;H3BVD2;H3BT57;H3BT29;P29590-10;P29590-14;H3BUJ5 P29590-2 PML Protein PML 1 KAS(0.996)PEAAS(0.002)T(0.002)PR;KAS(0.993)PEAAS(0.006)T(0.001)PR;KAS(1)PEAASTPR 108.97 0.017355 9617500 3481.26 3794.7 4277.2 2649.67 3409.48 3605.3 4259.6 3331.7 2529.97 4526.3 TRUE FALSE 3185.160556 3547.66434 3986.875581 2853.748043 3273.673192 3809.42897 3975.449856 3302.571298 2792.969435 5087.052216 0.626130895 0.697390982 0.783730029 0.560982652 0.643530487 0.748848018 0.781483989 0.649211205 0.549034945 1 12.31261419 -6.760900198 24.99999481 0.726026856 0.665411042 0.096647053 0.119930582 49.56389412 2298174.65 0.040384386 0.038082507 1.73E-07 6.760900198 -0.060615814 KAS(ph)PEPEGEAAGK ddPTM_A459_MK2206_30min_R1 7 KASPEPEGEAAGK 13 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK 155.56 0.00026883 334900400 27301.41 28559.09 28961.87 25703.08 22224.59 19469.53 24013.48 25084.59 19799.04 24046.71 TRUE FALSE 24979.28171 26699.88805 26996.01896 27682.73568 21339.33752 20571.87796 22411.58456 24865.27807 21857.22106 27025.79798 0.924275455 0.987940784 0.998898126 1.0243078 0.789591395 0.7611941 0.82926634 0.920057128 0.808753957 1 14.7220496 -6.258235401 24.98895608 0.841855315 0.985221818 0.468610022 0.068595781 236.8094228 1846958.585 0.020516348 0.025391116 5.52E-07 6.258235401 0.143366502 KAS(ph)PEPEGEAAGK ddPTM_A459_MK2206_30min_R2 6 KASPEPEGEAAGK 13 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK 142.54 0.0013828 691136000 420562 430145 436261 423890 390317 280213 479053 339140 309650 448428 TRUE FALSE 452760.5501 408784.6248 450805.724 389256.831 374991.1934 290876.7021 416152.7657 383466.7624 336582.7973 433795.8311 1.043718076 0.942343369 1.039211748 0.897327275 0.864441672 0.670538261 0.959328642 0.883979824 0.775901411 1 18.72665666 -5.928800565 3.894680288 0.850578785 1.001396709 0.352772082 0.089708343 0.243809498 7.354872088 0.025698378 0.039065037 1.18E-06 5.928800565 0.150817924 KAS(ph)PEPPDSAEGALK ddPTM_A459_MK2206_30min_R1 5 KASPEPPDSAEGALK 15 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 KAS(0.999)PEPPDS(0.001)AEGALK;KAS(0.888)PEPPDS(0.112)AEGALK;KAS(0.99)PEPPDS(0.01)AEGALK;KAS(1)PEPPDSAEGALK;KAS(1)PEPPDSAEGALK 208.49 2.88E-06 233293000 26569.6 28333.3 29337.6 25249.1 21121.2 18533.7 22833 24663.5 24366.8 21563.6 TRUE FALSE 24309.716 26488.79702 27346.24545 27193.79006 20279.89788 19583.06208 21309.85223 24447.86962 26899.81606 24235.06156 1.003080431 1.092994831 1.128375324 1.122084629 0.836799932 0.808046723 0.879298457 1.008780999 1.109954517 1 14.56480813 -6.246946168 24.89266611 0.931238401 1.090069709 0.389308695 0.089185768 831.7801683 1428614.929 0.029221462 0.037548813 5.66E-07 6.246946168 0.158831307 KAS(ph)PEPPDSAEGALK ddPTM_A459_MK2206_30min_R2 5 KASPEPPDSAEGALK 15 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 KAS(0.977)PEPPDS(0.023)AEGALK;KAS(0.97)PEPPDS(0.03)AEGALK;KAS(0.979)PEPPDS(0.021)AEGALK;KAS(1)PEPPDSAEGALK;KAS(1)PEPPDSAEGALK 172.95 6.39E-05 279701000 320592 342354 329552 321702 328995 239369 378518 270779 257895 334461 TRUE FALSE 345136.77 325353.1982 340539.0992 295417.9175 316077.0032 248478.355 328818.1319 306170.745 280326.2409 323547.565 1.066726526 1.005580735 1.052516341 0.913058695 0.976910468 0.767980915 1.016289929 0.946292843 0.866414312 1 18.30361829 -5.762622507 24.98983761 0.923679809 1.038005171 0.367852254 0.068896582 32.79147978 692644.8151 0.018622266 0.029461962 1.73E-06 5.762622507 0.114325361 KAS(ph)SPSPLTIGTPESQR ddPTM_A459_MK2206_30min_R1 1 KASSPSPLTIGTPESQR 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 KAS(0.435)S(0.292)PS(0.233)PLT(0.038)IGT(0.001)PESQR 65.416 0.022327 54876000 2299.5 2179.7 2421.7 2183.6 3147.7 2257.1 2374.4 2397.3 1673.9 1387.2 TRUE FALSE 2103.91545 2037.801134 2257.321751 2351.78125 3022.320444 2384.895051 2216.008108 2376.340659 1847.907895 1559.056809 1.349479658 1.307073047 1.447876523 1.508464116 1.93855697 1.529703753 1.421377397 1.52421685 1.185272971 1 10.60645778 -8.423176827 2.682669548 1.001266879 1.509885658 0.51820484 0.162726627 0.2239772 3.251499753 0.171691874 0.046691226 3.77E-09 8.423176827 0.508618779 KASDVHEVR ddPTM_A459_MK2206_30min_R2 3 KASDVHEVR 9 1 P14618;P14618-3;B4DNK4;H3BQ34;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;; 93.556 0.016473 13314300 211461 52253.4 75021.2 71318.4 102469 101506 97037 834580 470658 120526 FALSE TRUE 227650.6167 49658.57214 77522.36936 65491.45858 98445.55219 105368.882 84295.92534 943662.4715 511594.9821 116593.2465 1.952519752 0.425912938 0.664895881 0.561708852 0.844350382 0.903730577 0.722991493 8.093628919 4.387861197 1 16.8311247 -7.728016276 24.99976288 4.930559245 0.831879658 0.497595755 1.651893805 120.108504 89838.59882 0.723138906 0.417472055 1.87E-08 7.728016276 -4.098679587 KASGS(ph)ENEGDYNPGR ddPTM_A459_MK2206_30min_R1 4 KASGSENEGDYNPGR 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KAS(0.216)GS(0.784)ENEGDYNPGR;KAS(0.038)GS(0.962)ENEGDYNPGR;KAS(0.001)GS(0.999)ENEGDYNPGR;KAS(0.269)GS(0.731)ENEGDYNPGR 166.67 0.00014009 38789500 2883.33 2403.93 2378.38 1863.86 2498.65 1982.36 1939.12 2369.29 1961.39 1359.62 TRUE FALSE 2638.087643 2247.43372 2216.942192 2007.41482 2399.12348 2094.59951 1809.764843 2348.575547 2165.283509 1528.05999 1.726429368 1.470775843 1.450821438 1.313701578 1.570045348 1.370757381 1.184354577 1.53696554 1.417014727 1 10.57748547 -13.46030415 0.117934039 7.66E-19 1.666045532 0.548131775 0.130476769 99.60142498 0.980834907 26.24335355 1.466017253 3.46E-14 13.46030415 1.666045532 KASGS(ph)ENEGDYNPGR ddPTM_A459_MK2206_30min_R2 1 KASGSENEGDYNPGR 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KAS(0.093)GS(0.907)ENEGDYNPGR 62.916 0.038106 31055000 10689 15785 12378 17159 18388 13454 17361 13912 15774 14765 TRUE FALSE 11507.35806 15001.13985 12790.67634 15757.05481 17665.99473 13966.0014 15081.47985 15730.34617 17145.99401 14283.21926 0.805655773 1.05026322 0.895503745 1.10318651 1.236835647 0.977790871 1.055888002 1.101316579 1.200429238 1 13.80203356 -5.768030771 24.9312102 1.099923842 0.930453136 0.43525766 0.093193059 141.6558354 535799.5962 0.025760375 0.039228904 1.71E-06 5.768030771 -0.169470705 KASS(ph)PNLHR ddPTM_A459_MK2206_30min_R2 1 KASSPNLHR 9 1 A0A087X030;P51956-2;P51956 A0A087X030 NEK3 Serine/threonine-protein kinase Nek3 1 KAS(0.388)S(0.612)PNLHR 85.288 0.018158 9925600 17741 20721 16288 17412 25324 21410 24272 23978 29430 17078 TRUE FALSE 19099.2646 19692.02527 16831.03379 15989.3839 24329.65252 22224.77255 21085.05724 27112.00693 31989.7682 16520.74626 1.156077595 1.191957371 1.01878169 0.967836661 1.472672731 1.345264445 1.276277531 1.641088514 1.936339176 1 14.01199124 -6.662776981 1.199141477 1.520502989 1.091711095 0.298482577 0.24640621 0.542256179 1.648453746 0.120075801 0.118948237 2.17E-07 6.662776981 -0.428791894 KASS(ph)PSPLTIGTPESQR ddPTM_A459_MK2206_30min_R1 1 KASSPSPLTIGTPESQR 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 KAS(0.266)S(0.706)PS(0.012)PLT(0.005)IGT(0.01)PESQR 74.742 0.011738 13617000 4347.8 3640.3 4005.6 3570.1 4346.3 3794.5 3313.7 3607.3 3008 2536 TRUE FALSE 3977.996779 3403.315808 3733.711032 3845.069721 4173.177668 4009.341311 3092.649119 3575.761756 3320.692364 2850.178826 1.395700769 1.194070975 1.30999185 1.349062622 1.464180994 1.40669816 1.085071958 1.254574528 1.165082111 1 11.47683672 -8.217958037 0.770689688 1.014544377 1.340131782 0.553477965 0.095343477 0.513315682 0.659577492 0.097350475 0.038919655 6.05E-09 8.217958037 0.325587405 KASS(ph)PSPLTIGTPESQR ddPTM_A459_MK2206_30min_R2 3 KASSPSPLTIGTPESQR 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 KAS(0.052)S(0.784)PS(0.158)PLT(0.006)IGTPESQR;KAS(0.063)S(0.936)PSPLTIGTPESQR;KAS(0.169)S(0.786)PS(0.026)PLT(0.019)IGTPESQR 111.57 0.0010333 16346900 29098.2 48593 39183 43692 44674 45842 43571 32729 42359 38519 TRUE FALSE 31325.98056 46179.94228 40489.34166 40122.22384 42919.87429 47586.54943 37850.07536 37006.79268 46043.30925 37262.12818 0.840692201 1.239326483 1.086608405 1.0767561 1.151836365 1.277075458 1.015778679 0.993147587 1.235659676 1 15.18542245 -4.745479539 24.95316418 1.119680269 0.840691401 0.417558428 0.098812645 910.3877309 1423309.47 0.024298408 0.615699738 1.80E-05 4.745479539 -0.278988868 KASSPS(ph)PLTIGTPESQR ddPTM_A459_MK2206_30min_R1 3 KASSPSPLTIGTPESQR 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 KAS(0.187)S(0.187)PS(0.306)PLT(0.306)IGT(0.014)PESQR;KAS(0.086)S(0.229)PS(0.678)PLT(0.007)IGTPESQR;KAS(0.002)S(0.006)PS(0.935)PLT(0.052)IGT(0.005)PESQR 80.41 0.0085289 28936000 8880.5 7978.2 8963.6 7535.1 9252 8609.5 8547.9 8372.9 5891.62 5236.74 TRUE FALSE 8125.166842 7458.81773 8355.175806 8115.454708 8883.473249 9096.96245 7977.685188 8299.696618 6504.074982 5885.506887 1.380538159 1.267319514 1.419618729 1.378887981 1.509381166 1.545654882 1.355479713 1.410192321 1.105100225 1 12.52295096 -8.353582135 3.040448157 1.002624809 1.411297299 0.791888264 0.073788816 0.116292516 1.974167839 0.076555333 0.02086229 4.43E-09 8.353582135 0.40867249 KASSPS(ph)PLTIGTPESQR ddPTM_A459_MK2206_30min_R2 2 KASSPSPLTIGTPESQR 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 KAS(0.011)S(0.028)PS(0.951)PLT(0.009)IGT(0.001)PESQR;KAS(0.009)S(0.009)PS(0.688)PLT(0.258)IGT(0.035)PESQR 96.881 0.0029853 37074000 75202 133614 131516 145329 142668 151415 148382 97564 140711 136814 TRUE FALSE 80959.52294 126978.9231 135900.6778 133455.1558 137066.1375 157177.2039 128899.2652 110315.9498 152949.7884 132349.7704 0.611708828 0.959419292 1.026829721 1.008352001 1.035635627 1.187589548 0.973928892 0.833518256 1.15564831 1 17.01399617 -4.742867246 2.986645995 1.024532363 0.519968898 0.647447387 0.091598781 0.291289024 3.433311171 0.023783124 0.372889712 1.81E-05 4.742867246 -0.504563466 KASSPSPLT(ph)IGTPESQR ddPTM_A459_MK2206_30min_R1 1 KASSPSPLTIGTPESQR 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 KAS(0.003)S(0.003)PS(0.056)PLT(0.939)IGT(0.001)PESQR 178.57 3.42E-08 0 1512.5 1868.1 1772.4 1648.2 1894.6 1588.9 1948.7 1675.3 1923.2 1694.8 TRUE FALSE 1383.853933 1746.48635 1652.094426 1775.14465 1819.13407 1678.862145 1818.705779 1660.653029 2123.123522 1904.764619 0.726522279 0.916904027 0.867348338 0.931949613 0.955044026 0.88140137 0.954819173 0.871841598 1.114638261 1 10.89539701 -2.496994345 0.302682384 0.988302908 1.29E-32 0.503096224 0.067189032 28.35712769 0.689498136 0.066852144 13.59095673 0.003184239 2.496994345 -0.988302908 KASTAPGAEAS(ph)PSPCITER ddPTM_A459_MK2206_30min_R2 2 KASTAPGAEASPSPCITER 19 1 Q66PJ3 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 KASTAPGAEAS(0.846)PS(0.154)PCITER;KAS(0.001)T(0.001)APGAEAS(0.731)PS(0.254)PCIT(0.011)ER 140.93 5.71E-05 22726300 42927 69031 64262 69423 75319 74547 74086 54374 64811 57037 TRUE FALSE 46213.52413 65603.02092 66404.46301 63750.91883 72361.59761 77383.93832 64358.41921 61480.86849 70448.14363 55175.88736 0.837567393 1.188979898 1.203505121 1.155412661 1.311471389 1.402495583 1.166422912 1.114270589 1.276792218 1 15.75175031 -4.75913847 4.663746017 1.214747516 0.807620815 0.517875989 0.105192062 0.157628717 7.974956632 0.026405858 0.215045989 1.74E-05 4.75913847 -0.407126701 KASTAPGAEASPS(ph)PCITER ddPTM_A459_MK2206_30min_R2 1 KASTAPGAEASPSPCITER 19 1 Q66PJ3 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 KASTAPGAEAS(0.047)PS(0.817)PCIT(0.136)ER 147.52 2.09E-05 13420000 25758 45062 37733 47182 50988 40639 45539 31636 40260 34444 TRUE FALSE 27730.05228 42824.28661 38990.99939 43327.07967 48985.95493 42185.54562 39559.6746 35770.93382 43761.74203 33320.0951 0.832232087 1.285239027 1.170194721 1.300328812 1.470162518 1.266069184 1.187261755 1.073554374 1.313373863 1 15.0241049 -11.17346951 2.516332132 0.971108009 1.219060573 0.132028957 0.161043002 31643005.76 25862376.8 5904870.827 0.044132265 6.71E-12 11.17346951 0.247952564 KASVVDPSTESSPAPQEGSEQPASPAS(ph)PLSSR ddPTM_A459_MK2206_30min_R1 1 KASVVDPSTESSPAPQEGSEQPASPASPLSSR 32 1 Q66K14;Q66K14-2 Q66K14 TBC1D9B TBC1 domain family member 9B 1 KASVVDPSTESSPAPQEGS(0.01)EQPAS(0.33)PAS(0.394)PLS(0.133)S(0.133)R 170.4 6.49E-29 29878000 974.12 718.68 1027.7 835.49 967.61 991.35 1021.2 925.84 604.5 645.84 TRUE FALSE 891.2659787 671.8938014 957.9425873 899.8395846 929.0680448 1047.47938 953.0776113 917.7454785 667.3399382 725.851535 1.227890189 0.925662851 1.319750033 1.239701979 1.279969801 1.443104175 1.313047593 1.26437079 0.919389029 1 9.503530681 -8.258064771 24.71910503 0.959694489 1.25205763 0.466110709 0.12500035 221.1781623 1620174.098 0.100038786 0.034303823 5.52E-09 8.258064771 0.29236314 KASVVDPSTESSPAPQEGSEQPASPAS(ph)PLSSR ddPTM_A459_MK2206_30min_R2 4 KASVVDPSTESSPAPQEGSEQPASPASPLSSR 32 1 Q66K14;Q66K14-2 Q66K14 TBC1D9B TBC1 domain family member 9B 1 KASVVDPSTESSPAPQEGSEQPAS(0.002)PAS(0.69)PLS(0.154)S(0.154)R;KASVVDPSTESSPAPQEGS(0.001)EQPAS(0.137)PAS(0.687)PLS(0.088)S(0.088)R;KASVVDPSTESSPAPQEGSEQPAS(0.056)PAS(0.841)PLS(0.079)S(0.024)R;KASVVDPSTESSPAPQEGSEQPAS(0.008)PAS(0.752)PLS(0.12)S(0.12)R 173.64 2.29E-29 138252000 197899 295418 261805 343498 305702 297852 304205 238760 281621 268106 TRUE FALSE 213050.2996 280747.9717 270533.448 315433.1146 293698.6035 309186.9666 264262.5181 269966.7518 306115.8855 259357.7232 0.821453462 1.082473922 1.043090002 1.216208682 1.132407394 1.192125543 1.018911312 1.040905004 1.180284442 1 17.98458381 -4.483264693 1.881939365 1.110269885 0.474836087 0.565447474 0.073193553 1.68753547 3.060085455 0.01971486 2.47550014 3.29E-05 4.483264693 -0.635433798 KAVAEEDNGS(ph)IGEETDSSPGR ddPTM_A459_MK2206_30min_R2 1 KAVAEEDNGSIGEETDSSPGR 21 1 E9PNJ4;G0XQ39;Q13586 E9PNJ4 STIM1 Stromal interaction molecule 1 1 KAVAEEDNGS(0.966)IGEET(0.028)DS(0.003)S(0.003)PGR 54.465 0.017923 4619600 5362.9 4507.6 4225.2 4759.3 3935.6 4727.9 6725.1 3313.2 4033.8 4098 TRUE FALSE 5773.487747 4283.759139 4366.066059 4370.449966 3781.068569 4907.823547 5842.086292 3746.246616 4384.652633 3964.282596 1.456376433 1.080588741 1.101350863 1.102456715 0.953783813 1.238010517 1.473680584 0.94499989 1.106039372 1 11.95284409 -4.757428211 24.96545168 1.119281672 1.456376931 0.332618812 0.146275098 148.0693529 921452.7053 0.03759364 0.278787815 1.75E-05 4.757428211 0.337095259 KAVAEEDNGSIGEETDSS(ph)PGR ddPTM_A459_MK2206_30min_R1 1 KAVAEEDNGSIGEETDSSPGR 21 1 E9PNJ4;G0XQ39;Q13586 E9PNJ4 STIM1 Stromal interaction molecule 1 1 KAVAEEDNGSIGEET(0.006)DS(0.109)S(0.886)PGR 51.554 0.027044 6508400 955.51 776.44 526.77 575.3 1035.5 688.69 757.95 888 777.56 797.46 TRUE FALSE 874.2388569 725.8936149 491.0143201 619.6097057 994.2538423 727.6830326 707.3885385 880.2363096 858.3901445 896.2553653 0.975435005 0.809918292 0.547850913 0.691331656 1.109342137 0.811914841 0.78927119 0.982126684 0.95775175 1 9.80776604 -6.230643287 24.98841071 0.926726676 0.745098328 0.317357392 0.131863156 916.8814235 743971.2585 0.041094505 0.053047145 5.88E-07 6.230643287 -0.181628348 KAVPMAPAPAS(ph)PGSSNDSSAR ddPTM_A459_MK2206_30min_R1 2 KAVPMAPAPASPGSSNDSSAR 21 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 KAVPMAPAPAS(0.581)PGS(0.238)S(0.099)NDS(0.041)S(0.041)AR;KAVPMAPAPAS(0.894)PGS(0.054)S(0.017)NDS(0.017)S(0.017)AR 133.53 2.20E-05 36948000 7397.6 6463.1 6780.2 7141.5 8126.7 7485.1 5778.1 7342.5 4723.2 3396 TRUE FALSE 6768.395274 6042.351015 6319.978915 7691.539567 7802.99633 7908.899894 5392.653492 7278.305297 5214.193542 3816.722118 1.77335291 1.583125737 1.655865614 2.015221263 2.044423484 2.072170739 1.412901784 1.906951848 1.366144398 1 11.89811844 -8.492290494 2.846545978 1.000229389 1.806987046 0.622747888 0.203832158 0.166967462 3.109938627 0.207846636 0.055815546 3.22E-09 8.492290494 0.806757657 KAVPMAPAPAS(ph)PGSSNDSSAR ddPTM_A459_MK2206_30min_R2 4 KAVPMAPAPASPGSSNDSSAR 21 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 KAVPMAPAPAS(0.859)PGS(0.007)S(0.01)NDS(0.062)S(0.062)AR;KAVPMAPAPAS(0.846)PGS(0.046)S(0.015)NDS(0.046)S(0.046)AR;KAVPMAPAPAS(0.961)PGS(0.017)S(0.017)NDS(0.002)S(0.002)AR;KAVPMAPAPAS(0.89)PGS(0.067)S(0.021)NDS(0.011)S(0.011)AR 183.1 6.56E-15 38660900 76947 156198 137832 158712 181226 186426 154107 116157 182350 116844 TRUE FALSE 82838.12148 148441.4345 142427.2501 145744.7219 174110.1567 193520.5721 133872.5658 131339.1187 198210.4734 113031.3898 0.732877138 1.313276203 1.260068113 1.289418117 1.540369953 1.712095837 1.184383966 1.161970307 1.753587863 1 16.78636395 -4.486868799 1.744902302 1.382771638 6.71E-13 0.395240192 0.230561437 2.36491971 3.7639357 0.062128204 6.977995194 3.26E-05 4.486868799 -1.382771638 KAVPVES(ph)PVQKV ddPTM_A459_MK2206_30min_R2 1 KAVPVESPVQKV 12 2 Q8TB61-5;Q8TB61-4;Q8TB61-3;Q8TB61-2;Q8TB61 Q8TB61-5 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 1 KAVPVES(1)PVQKV 88.385 0.03077 4345500 49839 57922 51064 57098 67036 53136 69982 40274 47637 59806 TRUE FALSE 53654.71216 55045.67771 52766.44827 52432.91075 64403.82981 55158.12771 60793.27934 45537.95008 51780.38015 57854.53512 0.927407195 0.951449659 0.912053794 0.906288688 1.113202788 0.953393327 1.050795399 0.787111157 0.895009873 1 15.82014243 -7.755614061 24.99995347 0.880795389 0.972313867 0.17500148 0.077458448 210.1639688 901951.6491 0.037470116 0.020887932 1.76E-08 7.755614061 0.091518478 KAVS(ph)PLLLTTTNSSEGLSMGNYIGLINR ddPTM_A459_MK2206_30min_R1 3 KAVSPLLLTTTNSSEGLSMGNYIGLINR 28 1 C9JZT2;P19525-2;P19525 C9JZT2 EIF2AK2 "Interferon-induced, double-stranded RNA-activated protein kinase" 1 KAVS(0.999)PLLLTTTNSSEGLSMGNYIGLINR;KAVS(0.888)PLLLT(0.038)T(0.038)T(0.015)NS(0.015)S(0.006)EGLSMGNYIGLINR;KAVS(0.997)PLLLT(0.002)T(0.002)TNSSEGLSMGNYIGLINR 132.35 1.43E-12 44171600 6522.3 7089.2 6756.12 6165.8 7153.73 5685.7 6264.07 7439 4391.91 3155.56 TRUE FALSE 5967.544135 6627.691791 6297.533398 6640.690984 6868.781786 6007.619421 5846.20532 7373.961607 4848.464761 3546.494596 1.68265987 1.868800759 1.775706469 1.872466122 1.936780559 1.693959841 1.648446138 2.079225389 1.367114662 1 11.79217803 -8.50249797 4.736196369 1.001253206 1.813748046 0.822143944 0.124184519 0.059544568 3.984964958 0.115955949 0.030213018 3.14E-09 8.50249797 0.81249484 KAVVLPGGTAT(ph)SPK ddPTM_A459_MK2206_30min_R1 2 KAVVLPGGTATSPK 14 1 Q8N1G0;Q8N1G0-2;F8WCX2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 KAVVLPGGT(0.009)AT(0.652)S(0.34)PK;KAVVLPGGT(0.167)AT(0.724)S(0.109)PK 126.42 0.0016213 50743000 12309.1 14640.1 14679.2 14008.3 10224.1 8392.9 11050.8 11075.1 11854.2 9582.1 TRUE FALSE 11262.14641 13687.02683 13682.8168 15087.22169 9816.852447 8868.098745 10313.6213 10978.27157 13086.48651 10769.20289 1.045773445 1.270941496 1.270550564 1.400959927 0.91156723 0.823468444 0.957695885 1.01941357 1.215176893 1 13.39462385 -6.272453606 24.90978077 0.979127192 1.2504406 0.513251197 0.123450746 581.1906261 1314418.655 0.040493286 0.046341056 5.34E-07 6.272453606 0.271313408 KAVVLPGGTATS(ph)PK ddPTM_A459_MK2206_30min_R1 2 KAVVLPGGTATSPK 14 1 Q8N1G0;Q8N1G0-2;F8WCX2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 KAVVLPGGTAT(0.118)S(0.882)PK;KAVVLPGGT(0.008)AT(0.234)S(0.758)PK 129.29 0.0019119 16605300 8762.1 10315.3 10257.8 10022.2 6475.1 5916.1 7704 7234.4 7930.4 7165.7 TRUE FALSE 8016.837383 9643.772095 9561.529116 10794.11158 6217.183056 6251.064469 7190.080217 7171.150404 8754.793459 8053.441014 0.995454908 1.197472245 1.187260092 1.340310503 0.771990885 0.776197958 0.892796036 0.890445512 1.087087301 1 12.97538962 -6.266204464 24.99948088 0.890749628 1.181873257 0.570744325 0.117405573 294.666331 1545931.473 0.037167109 0.043503467 5.42E-07 6.266204464 0.291123629 KAVVLPGGTATS(ph)PK ddPTM_A459_MK2206_30min_R2 2 KAVVLPGGTATSPK 14 1 Q8N1G0;Q8N1G0-2;F8WCX2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 KAVVLPGGT(0.002)AT(0.208)S(0.789)PK;KAVVLPGGTAT(0.11)S(0.89)PK 166.9 0.00011515 46599000 361470 347580 327550 316890 314470 211940 398110 302220 225132 349470 TRUE FALSE 389144.4211 330319.6826 338470.3535 290999.0733 302122.3277 220005.5252 345837.6788 341721.1917 244713.5744 338066.8225 1.151087286 0.977083998 1.001193643 0.860773829 0.893676361 0.650775263 1.022986155 1.010809606 0.723861551 1 18.36694891 -4.624760086 0.994245239 0.880001453 1.34290776 0.32126217 0.11732547 3.115187129 2.013290939 0.038868614 1.662612469 2.37E-05 4.624760086 0.462906307 KAYGQALAK ddPTM_A459_MK2206_30min_R2 2 KAYGQALAK 9 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 86.67 0.045377 13651700 131027 156075 135572 156658 131155 139998 139443 98846 132230 120071 FALSE TRUE 141058.5279 148324.5425 140091.9028 143858.5403 126005.1957 145325.722 121133.9666 111765.5116 143731.1264 116153.0931 1.21441904 1.276974538 1.206097049 1.238525264 1.084819976 1.251156711 1.04288197 0.962225875 1.237428316 1 16.82566805 -6.747096894 0.760457896 1.055688189 1.24731661 0.394741708 0.086139692 0.674741675 0.857207972 0.058483688 0.058171789 1.79E-07 6.747096894 0.191628421 KAYS(ph)FCGTVEYMAPEVVNR ddPTM_A459_MK2206_30min_R1 1 KAYSFCGTVEYMAPEVVNR 19 1 B4DG22;B1AXG1;B7ZB17;P51812;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q9UK32-2;Q9UK32 B4DG22;E9PGT3;Q9UK32-2 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 1 KAY(0.027)S(0.93)FCGT(0.043)VEYMAPEVVNR 97.049 0.00081105 177260000 5170.7 4983.2 5327.8 5530.3 5454.9 4384.3 4476.8 4701.3 3476 2736.2 TRUE FALSE 4730.904813 4658.792774 4966.16378 5956.244664 5237.619782 4632.535277 4178.16084 4660.19703 3837.342639 3075.181113 1.53841502 1.514965331 1.614917495 1.936876055 1.70319067 1.506426811 1.358671469 1.515421973 1.247842809 1 11.58645567 -8.282685485 0.687730061 1.004691496 1.654624729 0.707506805 0.1303031 0.420035624 0.452399621 0.142192136 0.060304355 5.22E-09 8.282685485 0.649933233 KAYS(ph)FCGTVEYMAPEVVNR ddPTM_A459_MK2206_30min_R2 2 KAYSFCGTVEYMAPEVVNR 19 1 B4DG22;B1AXG1;B7ZB17;P51812;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q9UK32-2;Q9UK32 B4DG22;E9PGT3;Q9UK32-2 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 1 KAY(0.026)S(0.962)FCGT(0.009)VEY(0.002)MAPEVVNR;KAY(0.185)S(0.807)FCGT(0.008)VEYMAPEVVNR 72.654 0.0063783 47181000 58446 114660 101578 122403 116939 109297 108291 72707 101207 73965 TRUE FALSE 62920.6707 108966.1511 104964.5598 112402.2834 112347.3873 113456.3739 94072.26162 82210.05454 110009.8019 71551.52811 0.879375638 1.522904598 1.46697859 1.570927782 1.570160558 1.585659691 1.314748463 1.148962946 1.537490601 1 16.12669496 -9.921315075 0.567836903 0.949322528 1.425412095 0.219883074 0.219259246 13.22975322 3.765657903 1.651914038 0.095277267 1.20E-10 9.921315075 0.476089568 KCS(ph)LPAEEDSVLEK ddPTM_A459_MK2206_30min_R1 4 KCSLPAEEDSVLEK 14 1 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KCS(1)LPAEEDSVLEK;KCS(1)LPAEEDSVLEK;KCS(0.945)LPAEEDS(0.055)VLEK;KCS(1)LPAEEDSVLEK 176.28 0.0001241 291588000 27998.8 29050.7 27760.7 26865.1 24232.3 22100.1 23736.4 24691.4 24112.5 19258.8 TRUE FALSE 25617.35503 27159.49415 25876.38103 28934.25466 23267.07618 23351.38856 22152.98807 24475.52569 26619.08066 21644.72554 1.183537993 1.254785795 1.195505158 1.336780852 1.074953625 1.07884891 1.02348205 1.130784756 1.229818351 1 14.40172789 -6.282469492 24.72679093 1.092338927 1.240151458 0.534458122 0.069914547 579.9109975 681845.8563 0.021836288 0.024784296 5.22E-07 6.282469492 0.147812531 KCS(ph)LPAEEDSVLEK ddPTM_A459_MK2206_30min_R2 4 KCSLPAEEDSVLEK 14 1 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KCS(1)LPAEEDSVLEK;KCS(1)LPAEEDSVLEK;KCS(1)LPAEEDSVLEK;KCS(1)LPAEEDSVLEK 152.66 0.00019423 369231000 369827 349764 332904 369209 401759 303843 457488 341744 294092 390403 TRUE FALSE 398141.2395 332395.2284 344002.8532 339043.4437 385983.923 315405.9583 397419.2761 386411.1142 319671.5906 377664.1821 1.054220279 0.880134374 0.910869681 0.897737884 1.022029468 0.83514925 1.052308625 1.023160608 0.846444025 1 18.52674444 -7.282670729 24.9856854 0.982408346 0.932326991 0.078774587 0.078785455 2216.9542 2608966.776 0.031941309 0.021561532 5.22E-08 7.282670729 -0.050081355 KDAPT(ph)SPASVASSSSTPSSK ddPTM_A459_MK2206_30min_R2 1 KDAPTSPASVASSSSTPSSK 20 1 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 KDAPT(0.494)S(0.494)PAS(0.011)VASSSSTPSSK 63.706 0.024268 3372500 21236 25452 24611 29271 29263 22342 30064 25698 22485 27365 TRUE FALSE 22861.84449 24188.09069 25431.51846 26879.46567 28113.98759 23192.24047 26116.56069 29056.81683 24440.70466 26472.08229 0.863620936 0.913720743 0.960692029 1.01538917 1.062024033 0.876101857 0.986569942 1.097640016 0.923263398 1 14.69218406 -5.16586071 1.892872472 0.995634976 0.863256445 0.341800095 0.059378113 0.49741396 2.991298134 0.016910948 0.087740932 6.83E-06 5.16586071 -0.13237853 KDAPTS(ph)PASVASSSSTPSSK ddPTM_A459_MK2206_30min_R2 1 KDAPTSPASVASSSSTPSSK 20 1 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 KDAPT(0.114)S(0.885)PASVASSSSTPSSK 87.098 0.0011166 4160900 21508 27181 26035 29866 29333 21979 25307 24019 24903 23726 TRUE FALSE 23154.66902 25831.23106 26902.99391 27425.85226 28181.23903 22815.42625 21984.1605 27158.36577 27069.01793 22951.82256 1.008837924 1.12545446 1.172150657 1.194931348 1.22784319 0.994057277 0.957839424 1.183277088 1.179384245 1 14.4863211 -6.763670844 24.99928489 1.067799426 1.148899393 0.181152101 0.08773296 120.8815807 1354235.463 0.032722606 0.03024373 1.72E-07 6.763670844 0.081099967 KDASS(ph)SPASTASSASSTSLK ddPTM_A459_MK2206_30min_R2 2 KDASSSPASTASSASSTSLK 20 1 A0A669KBK8;Q04724 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 KDAS(0.151)S(0.522)S(0.327)PASTASSASSTSLK;KDAS(0.004)S(0.622)S(0.374)PASTASSASSTSLK 111.24 0.00018283 38291000 109811 125402 118391 132217 122402 109262 141975 105951 111777 127865 TRUE FALSE 118218.2146 119174.719 122338.0969 121414.4482 117595.8825 113420.042 123333.512 119799.1595 121499.1614 123692.7755 0.955740657 0.963473562 0.989048037 0.981580756 0.950709384 0.916949608 0.997095517 0.96852188 0.982265625 1 16.91640171 -8.384693532 1.106851258 0.998935281 0.963776527 0.22985892 0.020976169 0.807789648 2.120631937 0.021083562 0.006884001 4.12E-09 8.384693532 -0.035158754 KDASSS(ph)PASTASSASSTSLK ddPTM_A459_MK2206_30min_R1 2 KDASSSPASTASSASSTSLK 20 1 A0A669KBK8;Q04724 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 KDAS(0.066)S(0.116)S(0.791)PAS(0.021)T(0.006)AS(0.001)SASSTSLK;KDAS(0.133)S(0.133)S(0.57)PAS(0.133)T(0.032)ASSASSTSLK 90.268 0.0008803 39290000 15889.1 14450.2 14200.4 12906.7 14779.6 12673.4 13610.7 14163.2 12401.8 11561.3 TRUE FALSE 14537.64861 13509.48935 13236.51641 13900.77627 14190.89724 13390.95696 12702.75504 14039.37264 13691.01149 12993.60113 1.118831374 1.039703252 1.018694993 1.069817069 1.092145056 1.030580886 0.977616206 1.080483578 1.05367337 1 13.6655137 -6.836548849 15.12077001 1.03030846 1.063653308 0.221535141 0.036397587 3.067861388 613.7104177 0.013323633 0.011750694 1.46E-07 6.836548849 0.033344849 KDASSS(ph)PASTASSASSTSLK ddPTM_A459_MK2206_30min_R2 2 KDASSSPASTASSASSTSLK 20 1 A0A669KBK8;Q04724 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 KDAS(0.155)S(0.155)S(0.689)PAS(0.001)TASSASSTSLK;KDAS(0.006)S(0.094)S(0.899)PASTASSASSTSLK 118.59 0.00013246 32425000 131933 142718 123539 151731 151582 133377 149354 131855 124761 133138 TRUE FALSE 142033.8919 135630.8317 127657.7286 139334.0919 145630.129 138452.7552 129743.6404 149088.9012 135612.4863 128793.718 1.102801396 1.05308577 0.991179777 1.081839193 1.130723853 1.074996183 1.007375534 1.157578984 1.05294333 1 16.9747027 KDDDS(ph)DDESQSSHTGK ddPTM_A459_MK2206_30min_R2 4 KDDDSDDESQSSHTGK 16 1 O94874;O94874-3;O94874-2 O94874 UFL1 E3 UFM1-protein ligase 1 1 KDDDS(0.827)DDES(0.173)QSSHTGK;KDDDS(0.585)DDES(0.386)QS(0.021)S(0.006)HT(0.001)GK;KDDDS(0.974)DDESQS(0.01)S(0.015)HTGK;KDDDS(0.97)DDES(0.028)QS(0.001)S(0.001)HTGK 95.361 0.0044852 15477500 18585.1 20272.8 18368.2 23916 29842.3 18759.4 25315.4 35179 33952.9 27922.3 TRUE FALSE 20007.98955 19266.08223 18980.58662 21961.9863 28670.54136 19473.30211 21991.45757 39777.01609 36906.06187 27011.19764 0.740729449 0.713262792 0.702693264 0.813069698 1.061431697 0.72093442 0.814160774 1.472612086 1.366324528 1 14.72126999 -7.749089332 24.82492154 1.314601189 0.796547513 0.687907744 0.148977015 103.1287576 207300.8753 0.070833622 0.040512041 1.78E-08 7.749089332 -0.518053677 KDDPVTNLNNAFEVAEK ddPTM_A459_MK2206_30min_R1 2 KDDPVTNLNNAFEVAEK 17 1 O43707;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ; 175.19 1.76E-07 36995000 10427.6 9925.7 10181.5 9112.1 9424.7 8179.2 9426.2 9739.7 8306.2 8323.6 FALSE TRUE 9540.677862 9279.535126 9490.408147 9813.915521 9049.294242 8642.299236 8797.395397 9654.54683 9169.659214 9354.790408 1.01987083 0.991955428 1.014497144 1.049079145 0.967343345 0.923836757 0.940416088 1.032043093 0.980210012 1 13.19148962 -6.287531986 24.58107102 0.971392185 1.016618589 0.334673362 0.030804483 784.7211222 739260.365 0.010406143 0.011803088 5.16E-07 6.287531986 0.045226404 KDDPVTNLNNAFEVAEK ddPTM_A459_MK2206_30min_R2 1 KDDPVTNLNNAFEVAEK 17 1 O43707;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 108.96 0.0030925 10368000 79383 92670 91093 90713 96625 74899 92874 73915 73022 98905 FALSE TRUE 85460.62352 88068.14255 94129.99515 83301.45772 92831.017 77749.33393 80679.53224 83575.94429 79373.32157 95677.73795 0.893213253 0.920466395 0.983823376 0.870646187 0.970246778 0.812616765 0.843242472 0.873515052 0.829590282 1 16.54589566 -6.757977039 24.99999739 0.862103204 0.927229103 0.184350393 0.056978387 128.2738789 926209.1649 0.018022899 0.017331733 1.75E-07 6.757977039 0.065125898 KDDS(ph)DDDGGGWITPSNIK ddPTM_A459_MK2206_30min_R1 2 KDDSDDDGGGWITPSNIK 18 1 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 1 KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK 107.95 0.00079772 292190000 15131.6 19158.8 18149.7 13423.6 10584.5 10838.9 14609.8 13292.9 18147.9 19150.9 TRUE FALSE 13844.57796 17911.55864 16917.74893 14457.488 10162.89695 11452.58915 13635.2069 13176.68158 20034.43915 21523.45807 0.643232045 0.832187773 0.786014444 0.671708419 0.472177701 0.532098007 0.63350447 0.612200954 0.930818788 1 14.39362227 -8.338462549 4.385000716 0.990866934 0.649095715 0.617590116 0.100305274 0.169878835 5.799364003 0.109929153 0.029269885 4.59E-09 8.338462549 -0.341771219 KDDS(ph)DDDGGGWITPSNIK ddPTM_A459_MK2206_30min_R2 13 KDDSDDDGGGWITPSNIK 18 1 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 1 KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(0.999)DDDGGGWIT(0.001)PSNIK;KDDS(1)DDDGGGWITPSNIK 127.96 0.00036075 85139200 1412488 1199484 1275825 1128420 1150697 810322 1444311 1111504 858259 1575963 TRUE FALSE 1520629.167 1139919.369 1318360.369 1036224.476 1105514.854 841159.3715 1254671.231 1256781.389 932908.8164 1524539.456 0.997435101 0.747713917 0.864759756 0.679696725 0.725146764 0.551746541 0.822983771 0.824367899 0.611928286 1 20.53994206 -2.088979648 1.190383548 0.74058799 199.2161028 0.237421788 0.123827649 1611.363641 3.919747907 0.035377936 871350.5951 0.008147425 2.088979648 198.4755148 KDDVS(ph)PVMQFSSK ddPTM_A459_MK2206_30min_R1 1 KDDVSPVMQFSSK 13 1 Q8IZE3-2;Q8IZE3 Q8IZE3-2 SCYL3 Protein-associating with the carboxyl-terminal domain of ezrin 1 KDDVS(1)PVMQFSSK 116.86 0.0066947 9035300 2174.7 2654.5 2317.8 1804.7 2106.2 1784.9 2138.5 1912.3 2210.8 2385.5 TRUE FALSE 1989.730345 2481.691568 2160.474194 1943.698307 2022.305594 1885.959496 1995.844567 1895.580963 2440.620571 2681.03375 0.742150428 0.925647269 0.805836254 0.724980917 0.754300685 0.703444892 0.744430975 0.707033607 0.910328179 1 11.38857367 -8.466575929 4.198334738 0.998880978 0.766666828 0.623599815 0.061375099 0.133858237 4.829173686 0.064291925 0.016833404 3.42E-09 8.466575929 -0.23221415 KDEETEESEYDS(ph)EHENSEPVTNIR ddPTM_A459_MK2206_30min_R2 2 KDEETEESEYDSEHENSEPVTNIR 24 1 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 KDEETEESEYDS(0.999)EHENS(0.001)EPVTNIR;KDEET(0.001)EES(0.001)EY(0.15)DS(0.848)EHENSEPVTNIR 113.79 1.00E-07 17103500 29894.4 26863.3 32353.9 30067.7 32352 24457.9 30299.4 31529.8 23042.4 31742.5 TRUE FALSE 32183.13825 25529.30758 33432.56288 27611.07273 31081.69792 25388.66252 26321.05238 35650.85312 25046.5863 30706.74482 1.048080428 0.831390879 1.088769359 0.899185924 1.012210773 0.826810613 0.857174948 1.161010499 0.815670513 1 14.90626796 -10.56727816 3.775836068 1.000012002 0.949925436 0.016937093 0.116515081 154373911.2 330288441.1 25516.77436 0.027210781 2.71E-11 10.56727816 -0.050086566 KDELSDWSLAGEDDRDSR ddPTM_A459_MK2206_30min_R1 1 KDELSDWSLAGEDDRDSR 18 2 B4DXZ6;P51114-3;P51114;E7EU85;E9PFF5;P51114-2;H7C4S4 B4DXZ6 FXR1 Fragile X mental retardation syndrome-related protein 1 0 58.658 0.035356 9676200 7505.8 8070 7886.2 6321.8 7068.2 6829.1 7877.9 6205.6 7521.4 7960.7 FALSE TRUE 6867.392295 7544.641533 7350.906716 6808.706131 6786.658627 7215.75774 7352.379665 6151.345093 8303.276446 8946.931616 0.767569552 0.84326581 0.821612038 0.76101019 0.758545937 0.806506415 0.821776669 0.68753684 0.928058557 1 13.12717727 -8.470128662 5.716950234 0.999604981 0.787632136 0.753492947 0.04223298 0.084258714 5.939317124 0.040374502 0.01047485 3.39E-09 8.470128662 -0.211972844 KDELSDWSLAGEDDRDSR ddPTM_A459_MK2206_30min_R2 2 KDELSDWSLAGEDDRDSR 18 2 B4DXZ6;P51114-3;P51114;E7EU85;E9PFF5;P51114-2;H7C4S4 B4DXZ6 FXR1 Fragile X mental retardation syndrome-related protein 1 0 ; 104.16 0.0011936 18771300 97729 121936 104445 125249 115957 115020 132578 105140 92795 114831 FALSE TRUE 105211.2074 115880.8356 107927.1442 115015.756 111403.9455 119397.1667 115170.3493 118882.159 100866.1414 111084.0739 0.947131337 1.043181363 0.971580717 1.035393752 1.002879546 1.074836046 1.03678543 1.070199848 0.908016225 1 16.76129247 -4.749462421 24.80956363 1.01938419 0.947131157 0.157734101 0.047030524 900.0259025 1864223.777 0.011191344 0.18261495 1.78E-05 4.749462421 -0.072253033 KDEQEHEFYK ddPTM_A459_MK2206_30min_R2 1 KDEQEHEFYK 10 1 P43686;P43686-2 P43686 PSMC4 26S protease regulatory subunit 6B 0 75.509 0.04034 8467700 143450 161110 147730 163290 169820 121400 174340 142430 138410 164940 FALSE TRUE 154432.6423 153109.5117 152655.2445 149948.6847 163152.0135 126019.9621 151448.9486 161046.09 150448.6516 159558.0213 0.967877647 0.959585174 0.95673814 0.939775283 1.022524673 0.789806498 0.949177906 1.009326192 0.942908732 1 17.28372161 -7.54617457 20.84491033 0.981521209 0.93860547 0.106792129 0.057806784 89.24536626 79849.08262 0.02744538 0.015849595 2.84E-08 7.54617457 -0.04291574 KDFSDVILCMEATESS(ph)K ddPTM_A459_MK2206_30min_R1 1 KDFSDVILCMEATESSK 17 1 A0A0U1RQG2;Q9BY79-2;Q9BY79 A0A0U1RQG2 MFRP Membrane frizzled-related protein 1 KDFSDVILCMEAT(0.032)ES(0.141)S(0.827)K 59.512 0.03254 8095400 2438.2 2175.8 2381.5 1983.9 2409.4 1932.1 2216.5 1941 1882.1 1513.9 TRUE FALSE 2230.818287 2034.155025 2219.850415 2136.700322 2313.428496 2041.493832 2068.641329 1924.030042 2077.75103 1701.453361 1.311125146 1.19553969 1.304678968 1.255808928 1.359677878 1.199852948 1.215808424 1.130815622 1.221162494 1 10.73255189 -8.820899542 0.43183261 0.984903277 1.284320946 0.687799389 0.054069031 0.978683456 0.396255107 0.091682391 0.036357985 1.51E-09 8.820899542 0.299417669 KDGS(ph)SPPLLEK ddPTM_A459_MK2206_30min_R1 1 KDGSSPPLLEK 11 1 H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;Q6W2J9-3 H7BYY2 BCOR BCL-6 corepressor 1 KDGS(0.909)S(0.091)PPLLEK 72.662 0.030769 23113000 7488 7554.1 8418.7 7068.2 6394.1 6139.4 6973.2 6870.1 6486.5 6039.8 TRUE FALSE 6851.106279 7062.326717 7847.2621 7612.593989 6139.409457 6487.007522 6508.030551 6810.03544 7160.794887 6788.056022 1.009288411 1.040404896 1.156039678 1.12146894 0.904442956 0.955650263 0.958747325 1.003237955 1.054910988 1 12.72878276 -6.249346996 24.96405515 0.977430198 1.084146455 0.477725796 0.052352577 703.8117032 1452978.924 0.016843253 0.021569619 5.63E-07 6.249346996 0.106716257 KDGS(ph)SPPLLEK ddPTM_A459_MK2206_30min_R2 2 KDGSSPPLLEK 11 1 H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;Q6W2J9-3 H7BYY2 BCOR BCL-6 corepressor 1 KDGS(0.678)S(0.322)PPLLEK;KDGS(0.8)S(0.2)PPLLEK 121.13 0.0023264 39960000 253730 263710 239440 267890 264440 211101 285310 240480 220850 272710 TRUE FALSE 273155.7639 250614.5449 247422.8101 246002.5301 254056.7569 219134.5965 247848.4543 271911.5617 240059.1338 263811.495 1.035420249 0.949975833 0.93787729 0.932493597 0.963023832 0.830648401 0.939490731 1.030703994 0.909964646 1 18.0091479 -10.91614174 2.78106086 1.001098863 0.946264982 0.07435957 0.055103577 15808951.56 17903976.37 139314.4434 0.014050546 1.21E-11 10.91614174 -0.054833881 KDGSS(ph)PPLLEK ddPTM_A459_MK2206_30min_R1 1 KDGSSPPLLEK 11 1 H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;Q6W2J9-3 H7BYY2 BCOR BCL-6 corepressor 1 KDGS(0.083)S(0.917)PPLLEK 137.8 0.0023409 12441000 3911.6 4065.1 3999.5 2985.1 3560.9 3307.7 3222.9 3390.1 3029.9 2973.8 TRUE FALSE 3578.897879 3800.461251 3728.025083 3215.012919 3419.061813 3494.979116 3007.906222 3360.460713 3344.868948 3342.216795 1.070815599 1.137107939 1.115434848 0.961940268 1.02299223 1.045706886 0.899973403 1.005458628 1.000793531 1 11.7065896 -5.754263768 24.99990875 0.991030247 1.110718348 0.643718068 0.039803929 101.9725555 355268.9803 0.010987636 0.018533025 1.76E-06 5.754263768 0.1196881 KDKS(ph)PVREPIDNLTPEER ddPTM_A459_MK2206_30min_R2 1 KDKSPVREPIDNLTPEER 18 3 G3XAC6;Q14498-2;Q14498;Q5QP23;H0Y4X3;Q14498-3;Q5QP22 G3XAC6 RBM39 RNA-binding protein 39 1 KDKS(1)PVREPIDNLTPEER 55.912 0.046369 91294000 52456 72221 68328 63995 62712 53300 83114 55443 48601 71098 TRUE FALSE 56472.07169 68634.61016 70606.02142 58766.40379 60249.61178 55328.36885 72201.03196 62689.59046 52828.22713 68778.07808 0.821076617 0.997914046 1.026577412 0.854435097 0.876000224 0.804447731 1.049768094 0.911476334 0.768096879 1 16.06966118 -5.783974465 24.99897686 0.89309857 0.95346192 0.064358057 0.092967933 622.3701726 690415.4377 0.026360206 0.039129724 1.64E-06 5.783974465 0.06036335 KDLYANTVLS(ph)GGTTMYPGIADR ddPTM_A459_MK2206_30min_R1 1 KDLYANTVLSGGTTMYPGIADR 22 1 P60709;A0A2R8Y793;P63261 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 KDLY(0.001)ANT(0.025)VLS(0.705)GGT(0.252)T(0.016)MYPGIADR 56.452 0.011982 14182000 2395.4 2380.1 3150.5 2880.1 2885.2 3240.4 3039.9 3160.6 2803.7 2264.4 TRUE FALSE 2191.658651 2225.155057 2936.652838 3101.925801 2770.276374 3423.868648 2837.113818 3132.967207 3095.154648 2544.930967 0.861185894 0.874347904 1.153922395 1.218864417 1.088546766 1.345367985 1.114809735 1.231061765 1.216203774 1 11.31341081 -5.275316234 4.365981897 1.184370953 0.861180822 0.651768361 0.088543442 0.101431668 4.973806587 0.021666419 0.053502909 5.30E-06 5.275316234 -0.323190132 KDLYANTVLSGGTTMYPGIADR ddPTM_A459_MK2206_30min_R1 4 KDLYANTVLSGGTTMYPGIADR 22 1 P60709;A0A2R8Y793;P63261 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 0 ;;; 161.64 3.49E-09 75967500 14574.7 15204.8 15010.1 14798.8 14479.8 13826.7 14411.2 14159.4 11669 11974.3 FALSE TRUE 13335.04523 14214.96476 13991.25623 15938.60614 13903.0389 14609.55581 13449.85514 14035.60586 12882.03431 13457.76669 0.990880994 1.056264764 1.039641759 1.184342582 1.033086635 1.085585458 0.999412121 1.042937226 0.957219322 1 13.71615139 -7.570203114 1.467088106 0.989969056 1.067532933 0.266210793 0.051207597 0.588115112 2.418258686 0.037019351 0.016809833 2.69E-08 7.570203114 0.077563877 KDLYANTVLSGGTTMYPGIADR ddPTM_A459_MK2206_30min_R2 2 KDLYANTVLSGGTTMYPGIADR 22 1 P60709;A0A2R8Y793;P63261 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 0 ; 111.57 5.99E-05 13273000 107423 144752 125426 159795 147470 147201 146917 130266 141993 137253 FALSE TRUE 115647.3875 137563.8262 129607.6402 146739.2373 141679.5868 152802.8372 127626.6214 147292.2135 154343.2945 132774.4459 0.871006365 1.036071552 0.976148983 1.105176801 1.06706969 1.150845226 0.961228801 1.109341579 1.162447288 1 17.01861798 -3.711830319 0.806243503 1.080056639 1.66E-16 0.457645697 0.064778231 10.64546179 1.44275654 0.022707934 15.37283953 0.000194164 3.711830319 -1.080056639 KDNDFIYHDR ddPTM_A459_MK2206_30min_R1 2 KDNDFIYHDR 10 1 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 0 ; 90.653 0.01966 25554000 25595 25804 28283 23591 26486 25978 29476 24450 24811 23514 FALSE TRUE 23418.01085 24124.15491 26363.22876 25407.98291 25431.00653 27448.85191 27509.70982 24236.23623 27390.19224 26427.09184 0.886136507 0.912856967 0.997583424 0.961436962 0.962308176 1.038663356 1.040966217 0.917098119 1.036443677 1 14.68973005 -4.67091499 0.843050656 0.998371998 0.792737085 0.498812855 0.037972445 2.442236727 1.183519672 0.014007558 0.489491407 2.13E-05 4.67091499 -0.205634913 KDNDFIYHDR ddPTM_A459_MK2206_30min_R2 3 KDNDFIYHDR 10 1 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 0 ;; 102.95 0.0099445 51192700 325533 408316 389017 440868 414043 375480 410937 331194 356152 368014 FALSE TRUE 350456.0568 388039.6212 401986.6326 404847.6741 397785.5914 389769.1545 356980.4783 374482.193 387129.4572 356005.7333 0.984411272 1.089981382 1.129157749 1.137194253 1.117357262 1.094839543 1.002738004 1.051899332 1.087424783 1 18.44154095 -7.184618878 9.771909462 1.039877473 1.097017316 0.261164926 0.046009928 0.737939388 90.43873561 0.018362606 0.014218955 6.54E-08 7.184618878 0.057139843 KDNEESEQPPVPGT(ph)PTLR ddPTM_A459_MK2206_30min_R1 2 KDNEESEQPPVPGTPTLR 18 1 A0A2R8YDC1;A0A2R8Y6V8;O15439-4;O15439-3;O15439-2;O15439 A0A2R8YDC1 ABCC4 Multidrug resistance-associated protein 4 1 KDNEESEQPPVPGT(0.76)PT(0.24)LR;KDNEESEQPPVPGT(0.778)PT(0.222)LR 118.08 0.0012543 35262000 5902.7 5504.8 3490.5 4239.5 5579.5 5444.2 6984.3 5933.4 6978.5 6540 TRUE FALSE 5400.644369 5146.436519 3253.574585 4566.027025 5357.2567 5752.445899 6518.390091 5881.524909 7703.940048 7350.224574 0.734759097 0.700174051 0.442649684 0.621209186 0.728856193 0.782621788 0.886828698 0.800183022 1.048123084 1 12.84357261 -7.272524686 0.806595876 0.993832705 0.617248642 0.715023439 0.089625425 0.374535618 0.475399416 0.077183306 0.046287343 5.34E-08 7.272524686 -0.376584064 KDPSGASNPS(ph)ADSPLHR ddPTM_A459_MK2206_30min_R2 1 KDPSGASNPSADSPLHR 17 1 P55317-2;P55317 P55317-2 FOXA1 Hepatocyte nuclear factor 3-alpha 1 KDPS(0.001)GAS(0.002)NPS(0.827)ADS(0.17)PLHR 81.574 0.0078699 4664200 16474 16545 19956 22090 18170 19395 20238 15579 15489 16997 TRUE FALSE 17735.26211 15723.39936 20621.32308 20285.17634 17456.5545 20133.09032 17580.72629 17615.22879 16836.20522 16442.38928 1.078630472 0.956272175 1.254156116 1.233712205 1.061679918 1.224462575 1.069231849 1.071330236 1.02395126 1 14.00513234 -7.891563765 1.631723975 1.010889514 1.132625768 0.228811754 0.086578351 0.646886323 3.165016221 0.076213072 0.027143028 1.28E-08 7.891563765 0.121736254 KDPSGASNPSADS(ph)PLHR ddPTM_A459_MK2206_30min_R2 1 KDPSGASNPSADSPLHR 17 1 P55317-2;P55317 P55317-2 FOXA1 Hepatocyte nuclear factor 3-alpha 1 KDPSGAS(0.003)NPS(0.297)ADS(0.699)PLHR 66.041 0.021592 3774700 15984 22799 19795 25189 22856 24628 20453 16710 22846 18183 TRUE FALSE 17207.74733 21666.83481 20454.95542 23130.97812 21958.5586 25565.2358 17767.49653 18894.05437 24833.10378 17589.6902 0.978285981 1.231791724 1.162894581 1.315030445 1.248376654 1.453421607 1.010108554 1.07415504 1.411798815 1 14.10244245 -10.53192471 10.46558517 1.000000025 1.2103932 0.148093001 0.150758508 0 0 0.14491987 0.035148231 2.94E-11 10.53192471 0.210393175 KDS(ph)EEEVSLLGSQDIEEGNHQVEDGCR ddPTM_A459_MK2206_30min_R2 3 KDSEEEVSLLGSQDIEEGNHQVEDGCR 27 1 Q9Y487 Q9Y487 ATP6V0A2 V-type proton ATPase 116 kDa subunit a isoform 2 1 KDS(0.615)EEEVS(0.282)LLGS(0.103)QDIEEGNHQVEDGCR;KDS(0.979)EEEVS(0.02)LLGS(0.001)QDIEEGNHQVEDGCR;KDS(0.77)EEEVS(0.228)LLGS(0.002)QDIEEGNHQVEDGCR 69.876 0.00048429 13083700 40421.5 36136.8 38905.6 35525.9 36387.7 32921.4 55186 32980 34968.7 44769.2 TRUE FALSE 43516.20112 34342.29906 40202.69329 32623.32033 34958.93606 34174.24695 47940.01191 37290.59924 38010.21432 43308.38467 1.004798527 0.792971138 0.928288912 0.753279546 0.80720942 0.789090778 1.106945278 0.861048028 0.877664097 1 15.40235874 -7.191248042 25 0.949843202 0.841302903 0.261368021 0.094107007 236.330664 84173.27279 0.035437021 0.027449396 6.44E-08 7.191248042 -0.108540299 KDS(ph)EGYSESPDLEFEYADTDK ddPTM_A459_MK2206_30min_R2 1 KDSEGYSESPDLEFEYADTDK 21 1 Q5VSL9;Q5VSL9-4 Q5VSL9 STRIP1 Striatin-interacting protein 1 1 KDS(0.509)EGY(0.433)S(0.021)ES(0.038)PDLEFEYADTDK 87.326 0.0048206 0 14629 19881 16865 13208 16692 9789.5 18662 13236 14167 16030 TRUE FALSE 15749.00749 18893.73845 17427.27068 12128.86415 16036.58821 10162.04628 16211.65698 14965.99065 15399.22005 15506.94241 1.01561011 1.218405147 1.12383668 0.782157038 1.034155398 0.655322372 1.045445101 0.965115511 0.993053282 1 13.92062663 -5.699707606 12.34164444 0.921935981 1.129480437 0.341021191 0.123445805 0.857435979 169.1149399 0.032353568 0.056034701 2.00E-06 5.699707606 0.207544456 KDS(ph)FQENEDGYR ddPTM_A459_MK2206_30min_R2 3 KDSFQENEDGYR 12 1 Q5VYS8-5;Q5VYS8-3;Q5VYS8-2;Q5VYS8-4;Q5VYS8-6;Q5VYS8 Q5VYS8-5 ZCCHC6 Terminal uridylyltransferase 7 1 KDS(1)FQENEDGYR;KDS(1)FQENEDGYR;KDS(1)FQENEDGYR 78.505 0.022496 54867200 139416 165337 159488 152458 148255 139507 229200 154490 177988 226637 TRUE FALSE 150089.7962 157126.605 164805.2503 140001.6937 142433.7638 144816.0366 199105.7647 174682.3734 193469.0745 219241.8533 0.684585511 0.716681613 0.751705242 0.638571932 0.649665024 0.660530982 0.908155818 0.796756508 0.8824459 1 17.74216371 -7.260700002 24.99962153 0.879902605 0.684629301 0.773605082 0.056207136 34.52791166 1167476.25 0.022547576 0.016423304 5.49E-08 7.260700002 -0.195273304 KDS(ph)ISEDEMVLR ddPTM_A459_MK2206_30min_R2 1 KDSISEDEMVLR 12 1 Q8N5D0-5;Q8N5D0-3;Q8N5D0-6;Q8N5D0-2;Q8N5D0-4;Q8N5D0 Q8N5D0-5 WDTC1 WD and tetratricopeptide repeats protein 1 1 KDS(0.991)IS(0.009)EDEMVLR 103.66 0.0053875 3815900 13492 15629 14590 20286 16099 13353 16659 15296 12365 15096 TRUE FALSE 14524.95789 14852.88659 15076.42332 18628.56891 15466.87237 13861.15777 14471.65329 17295.23972 13440.48535 14603.41876 0.994627226 1.017082838 1.032389988 1.275630674 1.059126813 0.949172108 0.990977081 1.184328136 0.920365674 1 13.83401853 -6.531829223 24.85170603 1.017674056 1.083963905 0.104458611 0.09737056 500.7880416 1390466.569 0.033365152 0.033410812 2.94E-07 6.531829223 0.066289849 KDS(ph)LESDSSTAIIPHELIR ddPTM_A459_MK2206_30min_R2 2 KDSLESDSSTAIIPHELIR 19 1 Q9UMX1-2;Q9UMX1-3;Q9UMX1 Q9UMX1-2 SUFU Suppressor of fused homolog 1 KDS(0.994)LES(0.006)DSSTAIIPHELIR;KDS(0.991)LES(0.008)DSSTAIIPHELIR 134.81 0.00010208 9734200 63343 64446 69920 63301 58644 42069 60789 52232 47333 60949 TRUE FALSE 68192.58878 61245.70535 72251.0979 58129.10581 56341.3419 43669.96527 52807.33128 59058.90174 51449.93878 58960.23912 1.156586028 1.038762839 1.225420707 0.985903495 0.955581978 0.740668049 0.895643099 1.001673375 0.872620931 1 15.84745476 -6.005490077 3.269656673 0.903323803 1.129886246 0.597349579 0.083162786 0.170269497 3.792050989 0.025266885 0.036881045 9.87E-07 6.005490077 0.226562442 KDS(ph)LPDADLASCGSLSQSSASFFTPR ddPTM_A459_MK2206_30min_R1 1 KDSLPDADLASCGSLSQSSASFFTPR 26 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KDS(1)LPDADLASCGSLSQSSASFFTPR 154.87 1.64E-12 56709000 6014.1 6865.7 7212.9 6261.7 4355 3798.8 4958.4 5009.6 5178.7 4151.7 TRUE FALSE 5502.569214 6418.741682 6723.308444 6743.977219 4181.531128 4013.884773 4627.634183 4965.801595 5717.044397 4666.04394 1.179279339 1.375628212 1.440901228 1.445330843 0.89616197 0.860232956 0.991768239 1.064242356 1.225244441 1 12.18798418 -6.258859184 24.9991388 1.001459668 1.367139175 0.694651656 0.1149209 138.8429846 1345227.332 0.03754339 0.046276116 5.51E-07 6.258859184 0.365679507 KDS(ph)LPDADLASCGSLSQSSASFFTPR ddPTM_A459_MK2206_30min_R2 3 KDSLPDADLASCGSLSQSSASFFTPR 26 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KDS(1)LPDADLASCGSLSQSSASFFTPR;KDS(1)LPDADLASCGSLSQSSASFFTPR;KDS(1)LPDADLASCGSLSQSSASFFTPR 101.29 7.71E-07 22485400 144572 166799 155177 140241 150727.5 103666.7 151643 109359 112182.2 131791 TRUE FALSE 155640.5435 158516.0042 160350.5237 128782.8617 144809.181 107611.8089 131732.0919 123652.5968 121939.605 127490.6705 1.220799474 1.243353758 1.257743199 1.010135575 1.135841395 0.844075951 1.033268485 0.969895259 0.956459045 1 16.96003215 -5.949987924 1.417461273 0.972712749 1.251469808 0.704458432 0.072138224 0.216683338 0.883708071 0.023993956 0.04529498 1.12E-06 5.949987924 0.278757059 KDS(ph)LTQAQEQGNLLN ddPTM_A459_MK2206_30min_R1 1 KDSLTQAQEQGNLLN 15 1 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 KDS(0.764)LT(0.236)QAQEQGNLLN 127.05 0.0019576 25827000 3722.2 4649.1 4850.1 3927.5 4076.7 2959.5 4160.2 4421.5 3835.5 3941.3 TRUE FALSE 3405.607344 4346.442745 4520.888725 4229.996731 3914.316406 3127.064332 3882.680649 4382.843292 4234.21395 4429.577999 0.768833362 0.981231789 1.020613866 0.954943503 0.883677047 0.705950845 0.876535112 0.9894494 0.955895562 1 12.11295355 -7.762525467 24.99938715 0.979504381 0.88929898 0.198644817 0.089108824 58.03765689 1335777.351 0.050336506 0.026332723 1.73E-08 7.762525467 -0.090205401 KDS(ph)LTQAQEQGNLLN ddPTM_A459_MK2206_30min_R2 2 KDSLTQAQEQGNLLN 15 1 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 KDS(0.886)LT(0.114)QAQEQGNLLN;KDS(0.856)LT(0.144)QAQEQGNLLN 94.544 0.020465 57034000 194295 241577 241532 247685 224169 182349 273009 211292 185079 259943 TRUE FALSE 209170.3746 229580.6375 249584.5563 227448.3432 215366.9987 189288.419 237162.5904 238908.5899 201176.8369 251461.0812 0.831820072 0.912986759 0.992537514 0.904507139 0.856462549 0.752754335 0.943138355 0.950081773 0.800031702 1 17.9399756 -10.68827886 3.5861896 1.00011184 0.886630265 0.200622365 0.069847101 52438782.89 80703955.95 67700.26736 0.018150943 2.05E-11 10.68827886 -0.113481575 KDS(ph)QNSSQHSVSSHR ddPTM_A459_MK2206_30min_R2 1 KDSQNSSQHSVSSHR 15 1 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7;A0A087WXD2;H7C5T8;H7C4U7;H7C535;Q96QZ7-4;Q96QZ7-3;Q96QZ7-5 A0A087WT53 MAGI1 "Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1" 1 KDS(0.967)QNS(0.014)S(0.02)QHSVSSHR 69.261 0.037865 392260 579.15 0 433.91 2205.2 1238.2 1154.8 745.6 1183.1 3828 772.33 TRUE FALSE 623.4901693 0 448.3763428 2025.028106 1189.582047 1198.746723 647.7018244 1337.735232 4160.952521 747.1289354 0.83451482 0 0.600132483 2.71041317 1.592204491 1.604471018 0.866921081 1.790501169 5.569256287 1 9.545213427 -5.682541893 6.737091631 2.091689353 0.401207654 0.268700501 1.269421823 0.303074117 21.01950235 0.348922738 0.606338463 2.08E-06 5.682541893 -1.690481699 KDS(ph)SSEVFSDAAK ddPTM_A459_MK2206_30min_R1 2 KDSSSEVFSDAAK 13 1 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 KDS(0.942)S(0.056)S(0.002)EVFSDAAK;KDS(0.899)S(0.097)S(0.005)EVFSDAAK 206.13 2.28E-05 24540000 5977.7 6537.3 6107.5 4996.6 3927.3 3051.1 3949.5 3938 4022.8 3396.3 TRUE FALSE 5469.265225 6111.720582 5692.939916 5381.438998 3770.867325 3223.850645 3686.036061 3903.570481 4440.984456 3817.059285 1.432847859 1.60115946 1.491446554 1.409838988 0.987898548 0.844590143 0.965674302 1.022664358 1.163457029 1 11.89824588 -6.191814152 3.55620816 0.986945978 1.509289144 0.892377952 0.083152756 0.076860427 1.912764509 0.027641017 0.035966839 6.43E-07 6.191814152 0.522343166 KDS(ph)SSEVFSDAAK ddPTM_A459_MK2206_30min_R2 2 KDSSSEVFSDAAK 13 1 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 KDS(0.983)S(0.015)S(0.002)EVFSDAAK;KDS(0.978)S(0.022)S(0.001)EVFSDAAK 166.48 0.00059458 17172800 118850 117578 102358 92329 78156 53882 89866 67832 69009 75378 TRUE FALSE 127949.2474 111739.2475 105770.5646 84785.42535 75087.20274 55932.51727 78066.48625 76697.8753 75011.27808 72918.42203 1.754690294 1.532387076 1.450532824 1.162743556 1.029742562 0.767056057 1.070600324 1.051831254 1.028701335 1 16.15399572 -5.652651867 1.36877555 0.982804271 1.6933814 0.900371654 0.08952626 0.141701487 0.515244039 0.031350138 0.088746937 2.23E-06 5.652651867 0.710577129 KDSETGENIR ddPTM_A459_MK2206_30min_R1 2 KDSETGENIR 10 1 P38646 P38646 HSPA9 "Stress-70 protein, mitochondrial" 0 ; 129.88 0.0038885 25804000 11401.1 10543.1 8817.6 10447.8 7366 7813.4 11096.8 12052.5 886.6 6467.4 FALSE TRUE 10431.37658 9856.742274 8219.085879 11252.49137 7072.596622 8255.787956 10356.55272 11947.12626 978.7652427 7268.630338 1.435122725 1.356065973 1.130761298 1.548089646 0.973030171 1.135810678 1.424828645 1.643655779 0.134656076 1 12.82746782 -8.256491804 24.99902455 0.56732803 1.317022706 0.55477797 0.273394873 271.2795646 1370734.599 0.189809719 0.066687298 5.54E-09 8.256491804 0.749694676 KDSGSSSVSSTSSSS(ph)SSSPGDK ddPTM_A459_MK2206_30min_R2 1 KDSGSSSVSSTSSSSSSSPGDK 22 1 Q9H7S9 Q9H7S9 ZNF703 Zinc finger protein 703 1 KDSGSSSVSSTSS(0.001)S(0.046)S(0.858)S(0.086)S(0.008)S(0.002)PGDK 170.68 2.44E-13 0 9065.1 8194.7 7301.5 9702 7974.4 5706.3 8344.6 7025.8 5004.7 6227.8 TRUE FALSE 9759.131026 7787.763114 7544.928366 8909.315565 7661.284988 5923.457245 7248.943996 7944.096183 5439.99976 6024.587396 1.619883717 1.292663315 1.252356032 1.478825848 1.271669657 0.983213763 1.203226631 1.318612489 0.902966361 1 12.55664672 -1.522878745 0.174648991 0.958854378 3.29378344 0.557302427 0.141041977 48.91996769 0.539743435 0.353448583 30.05600119 0.03 1.522878745 2.334929062 KDSNELS(ph)DSAGEEDSADLKR ddPTM_A459_MK2206_30min_R2 1 KDSNELSDSAGEEDSADLKR 20 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 KDS(0.035)NELS(0.914)DS(0.047)AGEEDS(0.004)ADLKR 43.326 0.047278 8828100 21576 37899 33284 29409 26378 20886 36275 24678 21925 28760 TRUE FALSE 23227.87515 36016.99077 34393.67195 27006.19063 25342.26718 21680.83137 31512.04893 27903.49933 23831.99687 27821.56356 0.834887482 1.294571051 1.236223546 0.970692771 0.9108858 0.779281557 1.132648381 1.002945046 0.856601636 1 14.76391588 -5.864954054 7.154586639 0.947722217 1.138364721 0.23069023 0.142912617 0.299393639 18.2445846 0.040505028 0.060489172 1.36E-06 5.864954054 0.190642504 KDSS(ph)SEVFSDAAK ddPTM_A459_MK2206_30min_R2 1 KDSSSEVFSDAAK 13 1 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 KDS(0.12)S(0.814)S(0.067)EVFSDAAK 133.32 0.0023969 12428000 21008 22755 17266 17680 13290 9634.7 15762 13035 11219 13987 TRUE FALSE 22616.38863 21625.01979 17841.63982 16235.48744 12768.16782 10001.35526 13692.43047 14738.71926 12194.80834 13530.60534 1.671498656 1.598230031 1.318613571 1.199908433 0.943650894 0.739165397 1.011959933 1.0892875 0.901275888 1 13.72393876 -5.608909211 1.311877076 0.945566181 1.685427968 0.893280473 0.09367176 0.161270615 0.524717566 0.033987474 0.106398413 2.46E-06 5.608909211 0.739861787 KECSEAMEVETSVIS(ph)IDSPQK ddPTM_A459_MK2206_30min_R1 1 KECSEAMEVETSVISIDSPQK 21 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 KECSEAMEVETSVIS(0.857)IDS(0.143)PQK 188.49 7.32E-17 4699000 6766.4 7703.8 6321.2 5726.4 5434.7 4706.9 5731.5 6206.6 7557.2 7269.6 TRUE FALSE 6190.882148 7202.28122 5892.134556 6167.44832 5218.224391 4973.40061 5349.162093 6152.336351 8342.797984 8170.212931 0.757738164 0.881529194 0.721172705 0.754869961 0.63868891 0.6087235 0.654715139 0.753020319 1.021123691 1 12.99615796 -8.22756781 4.746778833 1.014547936 0.717207499 0.718761733 0.072550695 0.110439101 6.19360987 0.064628804 0.021283153 5.92E-09 8.22756781 -0.297340437 KECSEAMEVETSVISIDS(ph)PQK ddPTM_A459_MK2206_30min_R1 1 KECSEAMEVETSVISIDSPQK 21 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 KECSEAMEVETSVIS(0.138)IDS(0.861)PQK 156.2 9.63E-08 5881700 2835.2 3252.8 3096.2 2549.3 2264.9 2437 2735.8 2623.8 3679.9 3287.2 TRUE FALSE 2594.051352 3041.042129 2886.038571 2745.647528 2174.684237 2574.980834 2553.299774 2600.860393 4062.438774 3694.443153 0.702149484 0.823139511 0.781183646 0.743183049 0.588636541 0.696987537 0.691118977 0.703992533 1.099607872 1 11.85114121 -8.257597441 24.98850076 1.049803958 0.717180762 0.820348319 0.062426828 128.0760649 833038.795 0.050036284 0.017298202 5.53E-09 8.257597441 -0.332623197 KEDESQMEDPS(ph)TSPSPGTR ddPTM_A459_MK2206_30min_R2 3 KEDESQMEDPSTSPSPGTR 19 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2;H0YJN0;Q9UI08-5;G3V314 Q9UI08-4 EVL Ena/VASP-like protein 1 KEDESQMEDPS(0.466)T(0.24)S(0.24)PS(0.042)PGT(0.013)R;KEDESQMEDPS(0.293)T(0.209)S(0.184)PS(0.184)PGT(0.13)R;KEDESQMEDPS(0.312)T(0.312)S(0.312)PS(0.053)PGT(0.011)R 95.926 0.004376 8066700 112959 117561 99546 120524 119686 105416 114883 99462 96914 110124 TRUE FALSE 121607.2279 111723.0917 102864.814 110676.8037 114986.5263 109427.6797 99798.7241 112462.0249 105343.4045 106530.6629 1.141523244 1.048741167 0.965588791 1.038919694 1.079374925 1.027194207 0.936807501 1.05567751 0.988855243 1 16.70090922 -4.820594602 3.510306022 1.014418604 1.151444566 0.487710314 0.040087975 0.231916213 4.769106838 0.010339487 0.079400209 1.51E-05 4.820594602 0.137025962 KEDESQMEDPST(ph)SPSPGTR ddPTM_A459_MK2206_30min_R2 1 KEDESQMEDPSTSPSPGTR 19 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2;H0YJN0;Q9UI08-5;G3V314 Q9UI08-4 EVL Ena/VASP-like protein 1 KEDESQMEDPS(0.299)T(0.301)S(0.299)PS(0.092)PGT(0.009)R 72.805 0.015204 17508000 50804 66311 64873 74115 76069 59720 74978 49382 55120 62071 TRUE FALSE 54693.5933 63018.09217 67035.83344 68059.56742 73082.14884 61992.68645 65133.29854 55836.39695 59914.23797 60045.62835 0.910867199 1.049503418 1.116414888 1.133464155 1.217110235 1.032426309 1.084730068 0.929899453 0.997811824 1 15.87377159 -7.74746129 24.86255344 0.972891737 1.083941093 0.26968604 0.076315289 275.819159 490596.1606 0.038336205 0.021987639 1.79E-08 7.74746129 0.111049355 KEDEVEEWQHR ddPTM_A459_MK2206_30min_R1 1 KEDEVEEWQHR 11 1 P15311;E7EQR4 P15311 EZR Ezrin 0 133.05 0.0012785 14355000 10486 10528 11236 9832.9 10027 10101 11911 10666 11777 11837 FALSE TRUE 9594.110636 9842.625286 10473.33163 10590.23166 9627.603357 10672.90989 11116.43892 10572.74829 13001.26129 13303.45692 0.721174255 0.739854712 0.787263918 0.796051111 0.72369185 0.802265904 0.835605286 0.794736913 0.977284428 1 13.69951356 -8.207976912 1.069494434 1.010914445 0.761670166 0.842671464 0.036654134 0.180827607 0.411024058 0.034344344 0.011708163 6.19E-09 8.207976912 -0.249244279 KEDEVEEWQHR ddPTM_A459_MK2206_30min_R2 4 KEDEVEEWQHR 11 1 P15311;E7EQR4 P15311 EZR Ezrin 0 ;;; 141.89 0.00065252 29095400 364371 347465 382688 362090 310789 289517 392440 296536 306606 370231 FALSE TRUE 392267.5239 330210.3934 395446.6269 332506.0887 298585.8623 300534.7723 340912.1566 335294.2734 333274.0357 358150.3928 1.095259231 0.921988081 1.104135678 0.928397945 0.833688496 0.839130093 0.951868722 0.9361829 0.930542148 1 18.450206 -5.907500953 7.724517445 0.907508524 1.02802398 0.417647186 0.066014636 0.232229368 16.88691669 0.018435197 0.027452452 1.24E-06 5.907500953 0.120515457 KEDGTFYEFGEDIPEAPER ddPTM_A459_MK2206_30min_R2 1 KEDGTFYEFGEDIPEAPER 19 1 O43776 O43776 NARS "Asparagine--tRNA ligase, cytoplasmic" 0 123 0.0015866 0 15591 20307 18559 16983 12772 16895 19904 14093 16951 16088 FALSE TRUE 16784.65895 19298.58391 19177.7478 15595.43457 12270.50711 17537.95106 17290.58089 15935.00349 18425.36734 15563.04988 1.078494195 1.240025834 1.232261539 1.002080871 0.788438462 1.126896797 1.111002087 1.023899789 1.183917515 1 13.92583719 -5.764420133 24.98778469 1.031622644 1.189237066 0.287860262 0.107859862 98.1765461 823029.308 0.031585671 0.049226256 1.72E-06 5.764420133 0.157614422 KEDLEAEEEYSSLCELLGSPEQRPGMQDPLS(ph)PK ddPTM_A459_MK2206_30min_R1 1 KEDLEAEEEYSSLCELLGSPEQRPGMQDPLSPK 33 2 Q7Z5J4-3;Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2;A8MXE8;Q7Z5J4-4 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 KEDLEAEEEY(0.002)S(0.004)S(0.022)LCELLGS(0.336)PEQRPGMQDPLS(0.637)PK 45.308 0.0077404 5667100 849.17 1250.4 982.77 824.39 934.86 741.82 807.06 952.68 947.5 620.52 TRUE FALSE 776.9436323 1168.998733 916.0623106 887.8846606 897.6225466 783.8212073 753.2225 944.3508192 1045.996016 697.3947023 1.114065865 1.676236898 1.313549282 1.273145118 1.287108353 1.123927676 1.080051938 1.354112407 1.499862291 1 9.445831595 -5.515167956 22.25363327 1.241789042 1.420086751 0.109225973 0.184398806 157.3452169 454098.5878 0.048573418 0.089489944 3.05E-06 5.515167956 0.17829771 KEEASS(ph)PGAGEGPAEEGTR ddPTM_A459_MK2206_30min_R1 1 KEEASSPGAGEGPAEEGTR 19 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 KEEAS(0.109)S(0.891)PGAGEGPAEEGTR 71.143 0.0076215 6894100 1870.8 1905 1825.2 1937.3 1702.5 1586.6 1877.8 1966.2 1611.2 1410.3 TRUE FALSE 1711.678636 1780.984154 1701.310509 2086.511182 1634.68582 1676.431921 1752.535388 1949.009721 1778.690006 1585.018611 1.079910749 1.123636115 1.073369421 1.316395383 1.03133541 1.057673335 1.105687577 1.229644691 1.12218872 1 10.63028407 KEEASS(ph)PGAGEGPAEEGTR ddPTM_A459_MK2206_30min_R2 1 KEEASSPGAGEGPAEEGTR 19 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 KEEAS(0.101)S(0.899)PGAGEGPAEEGTR 101.92 0.00058405 7598500 14311 17185 15530 17372 16842 13147 17508 14198 14407 14233 TRUE FALSE 15406.66116 16331.61789 16047.76245 15952.65203 16180.69846 13647.3183 15209.17857 16053.72735 15660.09482 13768.57838 1.118972543 1.186151354 1.165535178 1.15862739 1.175190206 0.991192985 1.104629552 1.165968404 1.137379212 1 13.74909199 KEEELQAALAR ddPTM_A459_MK2206_30min_R1 2 KEEELQAALAR 11 1 P35579;A0A0C4DFM8;P35749-4;P35749-3;P35749;P35749-2;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-4;Q7Z406-5 P35579;P35749-4;Q7Z406 MYH9;MYH14;MYH11 Myosin-9;Myosin-11;Myosin-14 0 ; 113.67 0.0094223 9158700 5684.7 5557.3 6055.4 5702.4 6371.4 5348.4 5818.9 5886.4 5032.3 4962.2 FALSE TRUE 5201.186413 5195.51876 5644.376319 6141.599836 6117.613646 5651.221786 5430.731798 5834.935825 5555.425593 5576.954799 0.932621225 0.931604961 1.012089307 1.10124612 1.096945173 1.013316763 0.973780852 1.046258404 0.996139613 1 12.44526186 -5.322093779 4.171154437 1.035160914 0.930973926 0.500933445 0.039302141 0.177538282 6.24898048 0.011444419 0.026581327 4.76E-06 5.322093779 -0.104186988 KEEENADS(ph)DDEGELQDLLSQDWR ddPTM_A459_MK2206_30min_R1 3 KEEENADSDDEGELQDLLSQDWR 23 1 J3QQQ3;Q96NB3 J3QQQ3 ZNF830 Zinc finger protein 830 1 KEEENADS(1)DDEGELQDLLSQDWR;KEEENADS(1)DDEGELQDLLSQDWR;KEEENADS(1)DDEGELQDLLSQDWR 128.75 4.42E-06 24902200 3363.43 3881.9 3352.22 3597.33 3738.9 2911.61 3342.48 3197.62 3141.07 2988.9 TRUE FALSE 3077.352616 3629.187604 3124.680646 3874.39698 3589.971696 3076.462842 3119.509258 3169.663545 3467.595467 3359.187497 0.916100283 1.080376611 0.930189413 1.153373244 1.068702387 0.915835405 0.928649937 0.943580419 1.032272081 1 11.71389661 -6.757892554 24.99993646 0.958327742 1.03389806 0.167420273 0.072378122 151.9559721 1071069.367 0.024250481 0.023348453 1.75E-07 6.757892554 0.075570318 KEEENADS(ph)DDEGELQDLLSQDWR ddPTM_A459_MK2206_30min_R2 2 KEEENADSDDEGELQDLLSQDWR 23 1 J3QQQ3;Q96NB3 J3QQQ3 ZNF830 Zinc finger protein 830 1 KEEENADS(1)DDEGELQDLLSQDWR;KEEENADS(1)DDEGELQDLLSQDWR 97.352 3.40E-05 6092200 25354.9 26858.1 26162.3 29780 27833.5 21261.7 30407 23162.4 23877.7 30166.2 TRUE FALSE 27296.09064 25524.36581 27034.53802 27346.87874 26740.61694 22070.82889 26414.52437 26189.80521 25954.53919 29181.87936 0.935378092 0.874664907 0.926415249 0.93711849 0.916343208 0.756319654 0.905168719 0.897468079 0.88940602 1 14.83278518 -10.82398072 2.517189958 1.001878014 0.892010151 0.294307249 0.049612334 2041837.789 2178157.153 28834.59642 0.013288979 1.50E-11 10.82398072 -0.109867864 KEEPEPETEAVSSS(ph)QEIPTMPQPIEK ddPTM_A459_MK2206_30min_R2 1 KEEPEPETEAVSSSQEIPTMPQPIEK 26 1 A0A0A0MRY2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326-4;Q15326-5;Q15326-2;Q15326-6;Q15326-3;Q15326 A0A0A0MRY2 ZMYND11 Zinc finger MYND domain-containing protein 11 1 KEEPEPETEAVSS(0.031)S(0.968)QEIPTMPQPIEK 129.9 4.50E-09 0 11312 11288 11364 11593 11108 10032 15366 9889.3 8855.9 12592 TRUE FALSE 12178.05542 10727.45433 11742.87009 10645.81482 10671.84411 10413.77479 13348.42574 11181.86547 9626.170174 12181.12407 0.999748081 0.880662102 0.964021877 0.873959969 0.876096824 0.854910822 1.095828732 0.917966634 0.790253027 1 13.57235965 KEEPSQNDIS(ph)PK ddPTM_A459_MK2206_30min_R1 1 KEEPSQNDISPK 12 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KEEPS(0.062)QNDIS(0.938)PK 155.37 0.00076389 10859000 2448.4 3717.5 3400.2 2794.3 1932.8 1916.4 2033.7 2296 3032.5 2398.8 TRUE FALSE 2240.150723 3475.490074 3169.403897 3009.51747 1855.812483 2024.904912 1898.035584 2275.926314 3347.739227 2695.981454 0.830922156 1.289137234 1.175603005 1.116297542 0.688362481 0.751082656 0.704023976 0.844192126 1.241751579 1 11.39659486 -6.233105746 21.76756296 0.849376926 1.121473203 0.262557046 0.186781941 180.2093926 138446.0792 0.056094173 0.072384504 5.85E-07 6.233105746 0.272096277 KEEPSQNDIS(ph)PK ddPTM_A459_MK2206_30min_R2 4 KEEPSQNDISPK 12 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KEEPS(0.001)QNDIS(0.999)PK;KEEPSQNDIS(1)PK;KEEPS(0.016)QNDIS(0.984)PK;KEEPS(0.001)QNDIS(0.999)PK 184.48 0.00018638 24521700 108848 88328 88145 81483 90564 54980.2 118241 91912 59180.7 108020 TRUE FALSE 117181.4866 83941.75996 91083.71031 74825.57825 87008.00231 57072.51004 102715.8147 103925.214 64328.13031 104495.3162 1.1214042 0.803306435 0.871653521 0.716066336 0.832649782 0.546172901 0.982970513 0.994544231 0.615607786 1 16.67307875 -4.760280401 24.89154263 0.813530351 1.121404582 0.272746963 0.148407512 36.73930834 788696.4229 0.03594449 0.215242948 1.74E-05 4.760280401 0.30787423 KEEQAASAAAEDTCDVGVSS(ph)DDDKGAQAAR ddPTM_A459_MK2206_30min_R2 1 KEEQAASAAAEDTCDVGVSSDDDKGAQAAR 30 2 Q92539;J3KTK1 Q92539 LPIN2 Phosphatidate phosphatase LPIN2 1 KEEQAASAAAEDT(0.039)CDVGVS(0.17)S(0.791)DDDKGAQAAR 54.605 0.0022369 5220800 8434.3 10511 10156 10327 11376 9569.6 8358.1 9414 7568.1 12768 TRUE FALSE 9080.036493 9989.039024 10494.59597 9483.251066 10929.32108 9933.777834 7260.67143 10644.44212 8226.359658 12351.38121 0.73514341 0.808738623 0.84966983 0.767788712 0.884866308 0.804264533 0.587842874 0.861801765 0.666027509 1 13.59238476 -7.029918153 24.95319767 0.757208994 0.812697491 0.001343928 0.110230878 2224.029075 1854942.766 0.039228 0.030434061 9.33E-08 7.029918153 0.055488497 KEES(ph)DEEETASK ddPTM_A459_MK2206_30min_R1 4 KEESDEEETASK 12 1 Q9BY89;A0A1B0GVJ7;Q9BY89-2 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 KEES(0.994)DEEET(0.006)ASK;KEES(0.995)DEEET(0.005)ASK;KEES(1)DEEETASK;KEES(0.759)DEEET(0.237)AS(0.004)K 202.01 0.00012609 25050100 17063 19148.3 16533.1 15724.9 9222.61 9111.9 14416.5 15570.6 3444.94 12721 TRUE FALSE 15611.70225 17901.74219 15410.87924 16936.03452 8855.253915 9627.807904 13454.80159 15434.46789 3803.053841 14296.97352 1.091958534 1.252135088 1.077911994 1.184588787 0.619379612 0.673415803 0.941094391 1.079561899 0.266004119 1 13.80342216 -6.249921715 24.78828776 0.771621979 1.153559335 0.427454379 0.220084812 666.0264427 1433419.567 0.064000665 0.081895591 5.62E-07 6.249921715 0.381937356 KEES(ph)DEEETASK ddPTM_A459_MK2206_30min_R2 2 KEESDEEETASK 12 1 Q9BY89;A0A1B0GVJ7;Q9BY89-2 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 KEES(0.992)DEEET(0.008)ASK;KEES(0.998)DEEET(0.002)ASK 182.7 0.00018717 16733400 296674 266312 263602 212428 236055 169096 296859 254460 206433 295145 TRUE FALSE 319387.5895 253087.3333 272390.3591 195071.9529 226786.2946 175531.0668 257881.0567 287718.7957 224388.1692 285514.4428 1.118638996 0.886425677 0.954033556 0.68322972 0.79430761 0.614788748 0.903215453 1.007720635 0.785908296 1 18.1232042 -4.407127979 1.328810601 0.827275871 1.52603599 0.309511683 0.12288793 3.963483556 3.212349263 0.036917542 4.766691159 3.92E-05 4.407127979 0.698760119 KEESEES(ph)DDDMGFGLFD ddPTM_A459_MK2206_30min_R1 2 KEESEESDDDMGFGLFD 17 1 P05387;H0YDD8;P05386-2;P05386 P05387 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 1 KEES(0.033)EES(0.967)DDDMGFGLFD;KEES(0.065)EES(0.935)DDDMGFGLFD 83.948 0.0065258 36334300 7418.5 8926.2 8604 7649.7 6679.3 5577.7 6758.9 6968.2 6675.3 6530.2 TRUE FALSE 6787.517619 8345.102758 8019.984452 8238.881219 6413.249337 5893.504554 6308.026113 6907.277762 7369.221323 7339.210476 0.9248294 1.137057288 1.092758476 1.122584132 0.873833685 0.803016152 0.859496554 0.941147251 1.004089111 1 12.84140916 -6.265095788 24.99170469 0.902420406 1.075821691 0.476493042 0.079322754 262.6245604 1795047.119 0.025073042 0.029537156 5.43E-07 6.265095788 0.173401285 KEESEES(ph)DDDMGFGLFD ddPTM_A459_MK2206_30min_R2 1 KEESEESDDDMGFGLFD 17 1 P05387;H0YDD8;P05386-2;P05386 P05387 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 1 KEES(0.093)EES(0.907)DDDMGFGLFD 78.228 0.034155 44666000 5606.6 6471 4770.7 5631.2 9363 6284.5 10261 7702.6 6106.9 7571.4 TRUE FALSE 6035.845607 6149.65955 4929.752757 5171.112947 8995.361575 6523.661051 8913.718374 8709.356267 6638.067123 7324.345838 0.824079821 0.839618948 0.673063898 0.706017037 1.22814539 0.890681734 1.216998565 1.189096809 0.906301705 1 12.8384842 -6.250817722 24.95480112 1.079522487 0.760072981 0.613956363 0.120789968 462.3781747 1086323.062 0.035357849 0.045153243 5.61E-07 6.250817722 -0.319449506 KEGITGPPADSSKPIGPDDAIDALSSDFTCGS(ph)PTAAGK ddPTM_A459_MK2206_30min_R2 2 KEGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK 38 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;H0YA91;B7Z574;E7EVY3;E7ES10;E9PDE4 P20810-6 CAST Calpastatin 1 KEGITGPPADSSKPIGPDDAIDALS(0.05)S(0.073)DFT(0.118)CGS(0.64)PT(0.118)AAGK;KEGITGPPADS(0.001)SKPIGPDDAIDALS(0.055)S(0.055)DFT(0.195)CGS(0.58)PT(0.113)AAGK 48.741 0.0031411 63573000 88190 106384 105182 107644 95895 81756 126414 97195 84506 114801 TRUE FALSE 94941.89421 101101.1253 108688.7154 98849.14086 92129.68047 84867.28187 109815.6899 109898.7202 91856.17913 111055.0528 0.854908371 0.910369431 0.978692213 0.890091341 0.829585671 0.76419109 0.988840104 0.989587754 0.827122916 1 16.76091551 -10.68129072 5.030166011 1.000001473 0.895633067 0.163596002 0.072562471 5.24E-06 8.77E-07 0.07418157 0.017990622 2.08E-11 10.68129072 -0.104368406 KEGSYSSLS(ph)PPTLTPVMPVNAGGK ddPTM_A459_MK2206_30min_R1 2 KEGSYSSLSPPTLTPVMPVNAGGK 24 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 KEGSYSS(0.007)LS(0.98)PPT(0.009)LT(0.003)PVMPVNAGGK;KEGS(0.001)YS(0.002)S(0.055)LS(0.939)PPT(0.001)LT(0.002)PVMPVNAGGK 125.62 7.38E-08 41509000 8813.5 8229.1 8629 6969.7 8283 7462.1 7989.5 8391.3 7446.1 6688.6 TRUE FALSE 8063.865543 7693.384094 8043.287522 7506.507502 7953.07057 7884.597653 7456.535033 8317.935749 8220.148741 7517.234264 1.072717074 1.023432798 1.069979628 0.998573044 1.057978279 1.048869488 0.991925324 1.106515436 1.09350706 1 12.87598625 -7.775970383 24.99999762 1.075008413 1.038048459 0.102974204 0.036873075 419.5231673 721762.6486 0.018835772 0.009110359 1.68E-08 7.775970383 -0.036959955 KEGSYSSLS(ph)PPTLTPVMPVNAGGK ddPTM_A459_MK2206_30min_R2 1 KEGSYSSLSPPTLTPVMPVNAGGK 24 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 KEGS(0.003)Y(0.002)S(0.003)S(0.174)LS(0.513)PPT(0.227)LT(0.078)PVMPVNAGGK 113.87 9.80E-08 10297000 23085 26685 23005 31650 25785 22453 30379 21668 26937 27924 TRUE FALSE 24852.40535 25359.8617 23771.97522 29064.09376 24772.55134 23307.46465 26390.20081 24500.082 29279.93157 27012.84217 0.920021862 0.938807607 0.880024955 1.075936163 0.917065712 0.862829039 0.976950172 0.906979053 1.083926356 1 14.72135782 -8.257247059 24.9983793 1.041963181 0.936248577 0.345645145 0.058938213 376.0153204 2242177.603 0.042632906 0.014779847 5.53E-09 8.257247059 -0.105714604 KEGT(ph)GSTATSSSSTAGAAGK ddPTM_A459_MK2206_30min_R1 1 KEGTGSTATSSSSTAGAAGK 20 1 E5RGU4;A0A087WZK9;B3KS98;O15372;E5RHC7;E5RH59;E5RFW7;E5RFH0 E5RGU4 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 KEGT(0.399)GS(0.294)T(0.294)AT(0.013)S(0.001)SSSTAGAAGK 93.093 0.0042213 0 850.54 840.46 1002 684.35 791.98 829.82 878.19 748.22 751.26 745.1 TRUE FALSE 778.1971066 785.7459012 933.9870317 737.0587556 760.4337596 876.8036913 819.6075474 741.6783914 829.3561654 837.4086132 0.929291978 0.938306448 1.115330099 0.880166198 0.908079697 1.047044033 0.978742677 0.885682783 0.990384088 1 9.709787947 -3.209727604 0.001557321 1.919431922 4.78E-05 0.008314163 0.070452067 5897941.744 996.3325389 603976.3983 624136.1991 0.000616982 3.209727604 -1.91938412 KEGTGS(ph)TATSSSSTAGAAGK ddPTM_A459_MK2206_30min_R1 1 KEGTGSTATSSSSTAGAAGK 20 1 E5RGU4;A0A087WZK9;B3KS98;O15372;E5RHC7;E5RH59;E5RFW7;E5RFH0 E5RGU4 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 KEGT(0.22)GS(0.555)T(0.158)AT(0.065)S(0.001)SSSTAGAAGK 88.504 0.0010118 1479700 916.29 1167.4 922.97 1007.8 1010.8 891.33 1057.9 1138.6 881.06 740.55 TRUE FALSE 838.3547239 1091.402048 860.3213679 1085.420931 970.5376956 941.7963343 987.3294212 1128.64534 972.6493399 832.2949249 1.007280831 1.311316476 1.033673692 1.304130181 1.166098298 1.131565634 1.186273509 1.356064187 1.168635433 1 9.70095103 -4.734545392 24.70377649 1.192221167 1.007279735 0.186185876 0.109814073 3952.143282 3630063.303 0.025588912 2.178925455 1.84E-05 4.734545392 -0.184941432 KEGTGSTATSSSST(ph)AGAAGK ddPTM_A459_MK2206_30min_R2 1 KEGTGSTATSSSSTAGAAGK 20 1 E5RGU4;A0A087WZK9;B3KS98;O15372;E5RHC7;E5RH59;E5RFW7;E5RFH0 E5RGU4 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 KEGTGSTATS(0.001)S(0.008)S(0.054)S(0.413)T(0.523)AGAAGK 58.345 0.044616 2385400 9219.6 10564 10221 12565 13570 9359.8 14322 9349.4 10309 11201 TRUE FALSE 9925.459665 10039.40712 10561.76304 11538.39931 13037.17362 9715.993748 12441.5042 10571.39868 11205.65819 10835.51229 0.916012035 0.926528147 0.97473592 1.064868831 1.203189408 0.896680608 1.148215596 0.975625185 1.034160443 1 13.40347974 -5.554806626 3.375760563 1.049308001 0.924169868 0.282319224 0.080826226 0.292859117 6.921866382 0.021850364 0.043825611 2.79E-06 5.554806626 -0.125138133 KEKPELSEPSHLNGPS(ph)SDPEAAFLSR ddPTM_A459_MK2206_30min_R2 3 KEKPELSEPSHLNGPSSDPEAAFLSR 26 2 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 KEKPELS(0.003)EPS(0.028)HLNGPS(0.485)S(0.485)DPEAAFLSR;KEKPELSEPSHLNGPS(0.5)S(0.5)DPEAAFLSR;KEKPELS(0.013)EPS(0.117)HLNGPS(0.435)S(0.435)DPEAAFLSR 78.757 6.24E-05 27386900 42577 93488 70068 103961 117791 93305 102972 72132 103056 74142 TRUE FALSE 45836.72786 88845.52186 72404.03215 95467.05375 113165.9335 96855.78716 89451.65271 81559.90007 112019.6246 71722.75261 0.639082107 1.238735529 1.009498792 1.331056747 1.57782474 1.350419269 1.247186554 1.137155186 1.56184224 1 16.13014324 -4.473285312 1.223810948 1.311553666 5.60E-16 0.494927728 0.189530079 2.421521227 1.902765972 0.055945214 4.821079312 3.36E-05 4.473285312 -1.311553666 KEKPELSEPSHLNGPSS(ph)DPEAAFLSR ddPTM_A459_MK2206_30min_R2 1 KEKPELSEPSHLNGPSSDPEAAFLSR 26 2 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 KEKPELSEPSHLNGPS(0.096)S(0.904)DPEAAFLSR 107.95 1.13E-08 9973600 15268 36457 23988 36121 33374 35982 34882 27457 40237 23448 TRUE FALSE 16436.92982 34646.59839 24787.74795 33169.79875 32063.56907 37351.32022 30301.9515 31045.72417 43736.74153 22682.89368 0.7246399 1.527432914 1.092794786 1.462326598 1.413557261 1.646673513 1.335894438 1.368684464 1.928181745 1 14.46931708 -4.756401622 24.98079729 1.426455275 0.724638807 0.413160838 0.248315805 149.4228755 740860.7194 0.05864206 0.476559771 1.75E-05 4.756401622 -0.701816467 KELAGGDFTS(ph)PDASASSCGK ddPTM_A459_MK2206_30min_R2 1 KELAGGDFTSPDASASSCGK 20 1 Q9ULJ8-3;Q9ULJ8;Q9ULJ8-4;Q9ULJ8-5 Q9ULJ8-3 PPP1R9A Neurabin-1 1 KELAGGDFT(0.009)S(0.991)PDASASSCGK 154.87 1.33E-06 5183800 74770 76002 69616 70989 72999 69906 93554 64202 62565 81205 TRUE FALSE 80494.44869 72227.8512 71936.96269 65188.97162 70132.69247 72566.32182 81270.24742 72593.42184 68006.79061 78555.2875 1.024685304 0.919452445 0.915749467 0.829848298 0.89278131 0.923761138 1.034561135 0.924106119 0.865718818 1 16.26142077 -7.01574576 24.77354053 0.953970469 0.91145715 0.084508 0.060996362 1679.24618 2642030.743 0.023888326 0.019100475 9.64E-08 7.01574576 -0.042513319 KELEEVS(ph)PETPVVPATTQR ddPTM_A459_MK2206_30min_R1 2 KELEEVSPETPVVPATTQR 19 1 Q15149 Q15149 PLEC Plectin 1 KELEEVS(0.976)PET(0.024)PVVPATTQR;KELEEVS(0.962)PET(0.038)PVVPATTQR 125.08 0.00020346 18530500 4960.7 4988.1 5029.1 4153 4587.1 4480.7 5108.1 4442.1 5488.3 4917.9 TRUE FALSE 4538.766415 4663.373783 4687.738704 4472.86478 4404.386094 4734.393362 4767.347969 4403.263188 6058.828425 5527.16658 0.821174168 0.843718697 0.848126908 0.809250945 0.796861471 0.85656788 0.862530177 0.79665831 1.096190668 1 12.43232438 -8.259193832 25 1.048095349 0.830724055 0.888167317 0.031043566 53.69317127 597791.8145 0.022542082 0.007595067 5.51E-09 8.259193832 -0.217371294 KELEEVS(ph)PETPVVPATTQR ddPTM_A459_MK2206_30min_R2 2 KELEEVSPETPVVPATTQR 19 1 Q15149 Q15149 PLEC Plectin 1 KELEEVS(0.999)PET(0.001)PVVPATTQR;KELEEVS(0.977)PET(0.023)PVVPATTQR 79.025 0.003676 14809400 104652 95202 93573 103448 95610 93182 101640 86833 80371 115334 TRUE FALSE 112664.2376 90474.40712 96692.67712 94995.96749 91855.871 96728.10631 88294.54591 98182.37124 87361.5243 111570.661 1.00980165 0.810915758 0.866649675 0.851442186 0.823297721 0.866967224 0.791377815 0.880001699 0.783015208 1 16.76759818 -4.753627308 24.97045239 0.846898067 1.009801948 0.389632624 0.058621521 257.8121594 824001.6282 0.012974117 0.137138703 1.76E-05 4.753627308 0.162903882 KELQAEATVSGS(ph)PEAPGTNVVSEPR ddPTM_A459_MK2206_30min_R1 1 KELQAEATVSGSPEAPGTNVVSEPR 25 1 K7EJ02;Q9BZV1-2;Q9BZV1 K7EJ02 UBXN6 UBX domain-containing protein 6 1 KELQAEAT(0.009)VS(0.083)GS(0.663)PEAPGT(0.142)NVVS(0.104)EPR 75.794 0.00015293 5351600 1758 1598.1 1731.2 1254 1620.1 1527.4 1573.4 1564.8 1431.3 1271 TRUE FALSE 1608.472868 1494.0634 1613.690967 1350.583297 1555.567986 1613.880068 1468.441357 1551.119119 1580.088757 1428.461076 1.126017989 1.045925174 1.129670941 0.945481344 1.088981711 1.129803322 1.027988359 1.085867263 1.106147577 1 10.48024601 -7.854938576 0.005039409 1.69E-05 2.126373618 0.075859286 0.056810281 15026.02876 76.62980933 16147.3615 16179.6269 1.40E-08 7.854938576 2.126356707 KELQAEATVSGS(ph)PEAPGTNVVSEPR ddPTM_A459_MK2206_30min_R2 2 KELQAEATVSGSPEAPGTNVVSEPR 25 1 K7EJ02;Q9BZV1-2;Q9BZV1 K7EJ02 UBXN6 UBX domain-containing protein 6 1 KELQAEATVS(0.146)GS(0.854)PEAPGTNVVSEPR;KELQAEATVS(0.004)GS(0.995)PEAPGT(0.001)NVVSEPR 119.47 3.98E-08 18478900 58491 72886 69472 74870 72746 80529 85533 67264 74132 80523 TRUE FALSE 62969.11593 69266.58723 71788.16181 68752.8815 69889.62652 83593.58752 74302.41436 76055.63575 80579.86736 77895.5411 0.808378953 0.889224033 0.921595264 0.88262923 0.897222428 1.073149841 0.953872498 0.976379837 1.034460589 1 16.24925313 -6.640414046 7.285940346 1.002427876 0.881098992 0.717353921 0.040136085 0.132376244 7.914302633 0.013363796 0.013343546 2.29E-07 6.640414046 -0.121328884 KELS(ph)PAGSISK ddPTM_A459_MK2206_30min_R1 2 KELSPAGSISK 11 1 O95453;O95453-3;O95453-2;A0A494C0W0;A0A494C0K5;A0A494C0Q6;O95453-4 O95453 PARN Poly(A)-specific ribonuclease PARN 1 KELS(0.999)PAGS(0.001)ISK;KELS(0.975)PAGS(0.024)IS(0.001)K 167.22 0.00098659 117016000 7131.5 7470.3 7949.1 6538.8 6147.6 5529.8 6563.2 6690.5 6605.2 5929.4 TRUE FALSE 6524.928476 6983.982112 7409.537239 7042.419509 5902.728074 5842.892497 6125.380903 6632.005664 7291.834177 6663.978837 0.979134033 1.048019852 1.111878867 1.056788997 0.88576633 0.876787373 0.919177725 0.99520209 1.094216287 1 12.7021681 -6.232122103 24.18232834 0.955230829 1.053383172 0.287962059 0.066462399 613.8828057 506359.9317 0.021412376 0.027637821 5.86E-07 6.232122103 0.098152342 KELS(ph)PAGSISK ddPTM_A459_MK2206_30min_R2 1 KELSPAGSISK 11 1 O95453;O95453-3;O95453-2;A0A494C0W0;A0A494C0K5;A0A494C0Q6;O95453-4 O95453 PARN Poly(A)-specific ribonuclease PARN 1 KELS(0.99)PAGS(0.009)IS(0.001)K 67.846 0.037809 71848000 91405 106000 92786 101950 100880 83313 116230 96584 84683 112740 TRUE FALSE 98403.03708 100736.1941 95879.43893 93620.35888 96918.94432 86483.5346 100968.8614 109207.8604 92048.57427 109061.303 0.902272707 0.923665786 0.879133444 0.858419589 0.88866483 0.79298094 0.925799148 1.001343807 0.844007652 1 16.73477977 -9.108796335 0.536404396 1.003011713 0.881729919 0.267826465 0.052993575 2.969380055 1.42944477 0.090800872 0.026132421 7.78E-10 9.108796335 -0.121281795 KEMIGWIALGQNSS(ph)GEEEQDHWEEMK ddPTM_A459_MK2206_30min_R2 1 KEMIGWIALGQNSSGEEEQDHWEEMK 26 1 Q17RD7-3;Q17RD7-2;Q17RD7 Q17RD7-3 SYT16 Synaptotagmin-16 1 KEMIGWIALGQNS(0.459)S(0.541)GEEEQDHWEEMK 43.523 0.047694 0 6380.6 11556 8354.3 10654 11847 8796.7 10474 6010.1 10888 7707.4 TRUE FALSE 6869.103642 10982.14584 8632.828192 9783.53412 11381.82725 9131.464583 9098.751218 6795.640706 11835.01856 7455.908169 0.921296707 1.472945427 1.15785066 1.312185437 1.526551427 1.224728682 1.220341106 0.911443724 1.587334271 1 12.86416838 -7.190312198 3.73610758 1.171225129 1.289994823 0.035143324 0.227473655 0.797669845 21.76726721 0.088931528 0.065895887 6.45E-08 7.190312198 0.118769694 KEMQPTHPIR ddPTM_A459_MK2206_30min_R1 3 KEMQPTHPIR 10 1 E7EX29;P63104;B0AZS6;B7Z2E6;H0YB80;P27348;P31946-2;P31946;P63104-2 E7EX29;P27348;P31946-2;P63104-2 YWHAZ;YWHAQ;YWHAB "14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed" 0 ;; 94.409 0.012769 22013100 19036 19979.4 20875.8 18630 20323.2 21722.7 21186.6 20104.3 14553.1 16431.1 FALSE TRUE 17416.88824 18678.73743 19458.80886 20064.88583 19513.68391 22952.6205 19773.28057 19928.53022 16065.94682 18466.70872 0.943150645 1.011481673 1.053723712 1.08654369 1.056695278 1.242918858 1.070752827 1.079159829 0.869995139 1 14.17263914 -4.892582228 1.723610204 1.069459031 0.916790967 0.133529608 0.086804689 1.381579351 4.936958307 0.024796224 0.327580579 1.28E-05 4.892582228 -0.152668064 KEMQPTHPIR ddPTM_A459_MK2206_30min_R2 1 KEMQPTHPIR 10 1 E7EX29;P63104;B0AZS6;B7Z2E6;H0YB80;P27348;P31946-2;P31946;P63104-2 E7EX29;P27348;P31946-2;P63104-2 YWHAZ;YWHAQ;YWHAB "14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed" 0 74.944 0.041284 3764100 41844 45656 40203 48144 46286 47327 43559 46419 39586 41919 FALSE TRUE 45047.60881 43388.78943 41543.34795 44210.48119 44468.57907 49128.06215 37839.65098 52486.12268 43029.11872 40551.18646 1.110882634 1.069975831 1.024466892 1.090238907 1.09660365 1.211507392 0.933133017 1.294317806 1.061106283 1 15.30745651 -7.752441823 24.99996338 1.133284059 1.080893028 0.030300297 0.096091597 578.4523194 1607259.089 0.043244236 0.024515259 1.77E-08 7.752441823 -0.052391031 KENESLTHSTDR ddPTM_A459_MK2206_30min_R2 2 KENESLTHSTDR 12 1 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;Q8WX93-4;Q8WX93-7;H0YA05 Q8WX93 PALLD Palladin 0 ; 107.99 0.0055649 2503300 16903.8 39004 25084 46182 53472 54474 49947 33243 43593 30420 FALSE TRUE 18197.96792 37067.11808 25920.28804 42408.78287 51372.4206 56547.04624 43388.8989 37587.97424 47384.64034 29427.39789 0.618402211 1.259612495 0.880821612 1.441132615 1.745734393 1.921578199 1.474438857 1.277312197 1.610221893 1 14.84487236 -5.82886765 5.009879397 1.54157916 0.953049043 0.469968758 0.278066439 0.173472957 8.253017666 0.078779893 0.12121572 1.48E-06 5.82886765 -0.588530117 KENPLQFK ddPTM_A459_MK2206_30min_R2 1 KENPLQFK 8 1 P15311;E7EQR4;E9PQ82;A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3;A0A2R8Y5P0;E9PNV3;P35241-3 P15311;A0A2R8Y5S7 EZR;RDX Ezrin;Radixin 0 94.85 0.030257 4307100 38687 39400 44430 41586 43434 46485 43279 28111 41004 41820 FALSE TRUE 41648.90647 37443.45329 45911.27402 38188.29077 41728.56292 48254.01925 37596.41531 31785.20422 44570.4538 40455.41682 1.029501356 0.925548573 1.134860981 0.943959889 1.031470349 1.19277029 0.929329575 0.785684754 1.101717824 1 15.30404527 KENPS(ph)PLFSIK ddPTM_A459_MK2206_30min_R1 1 KENPSPLFSIK 11 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 KENPS(1)PLFSIK 81.656 0.021291 15542000 7087.4 7632.7 7529.2 6301.5 6482.6 6206.4 6888.7 6024.7 7858.4 7976.3 TRUE FALSE 6484.579413 7135.809843 7018.138882 6786.842622 6224.384315 6557.801005 6429.167392 5972.026683 8675.308802 8964.464262 0.723364969 0.796010741 0.782884362 0.757082902 0.694339799 0.731532952 0.717183671 0.666188911 0.967744256 1 13.13000165 -8.277399353 19.73931223 0.983874256 0.736160024 0.878058641 0.037300631 19.92332642 24637.15265 0.038013027 0.010084689 5.28E-09 8.277399353 -0.247714232 KENPS(ph)PLFSIK ddPTM_A459_MK2206_30min_R2 2 KENPSPLFSIK 11 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 KENPS(0.998)PLFS(0.002)IK;KENPS(0.994)PLFS(0.006)IK 108.14 0.0052077 30549000 324690 303730 304000 321880 280340 229762 339270 255930 215915 345120 TRUE FALSE 349548.516 288647.2099 314135.2083 295581.3744 269332.443 238505.7539 294723.4415 289380.9297 234694.8964 333858.7627 1.046995182 0.864578804 0.94092246 0.885348559 0.806725697 0.714391176 0.882778811 0.8667765 0.702976596 1 18.34887838 -1.522891573 0.629569637 0.826167364 16.69824195 0.318646732 0.086493206 229.286207 1.597347367 0.036470546 5047.229178 0.029999114 1.522891573 15.87207459 KENQWCEEK ddPTM_A459_MK2206_30min_R2 1 KENQWCEEK 9 1 E5RJR5;P63208 E5RJR5 SKP1 S-phase kinase-associated protein 1 0 131.12 0.0049798 4931600 24836 28812 22541 26008 22625 21179 29183 22011 18042 27369 FALSE TRUE 26737.46326 27381.23798 23292.50569 23883.0632 21736.62882 21984.98169 25351.23704 24887.91328 19611.26055 26475.95177 1.009877321 1.034192773 0.879760845 0.902066275 0.820995181 0.8303755 0.957519385 0.940019588 0.740719756 1 14.69239493 -5.264199481 24.60754487 0.880905193 1.022035058 0.378030111 0.07077214 176.2353912 1571238.9 0.017979479 0.040358175 5.44E-06 5.264199481 0.141129865 KEPAITSQNS(ph)PEAR ddPTM_A459_MK2206_30min_R1 2 KEPAITSQNSPEAR 14 1 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 KEPAITSQNS(1)PEAR;KEPAITSQNS(1)PEAR 134.83 0.00031461 58871000 8427 9299.5 9570.2 6607.2 8518 7859.4 9846.6 8132.8 8540.3 9377.1 TRUE FALSE 7710.239398 8694.10086 8920.601488 7116.087689 8178.710023 8304.392436 9189.75128 8061.695787 9428.094747 10538.80594 0.731604647 0.824960713 0.846452771 0.67522713 0.776056611 0.78798229 0.871991697 0.764953433 0.894607492 1 13.3634238 -8.766317718 0.683870142 1.003638265 0.775878313 0.61600045 0.054052218 0.747910848 0.719297355 0.056997711 0.021315389 1.71E-09 8.766317718 -0.227759952 KEPAITSQNS(ph)PEAR ddPTM_A459_MK2206_30min_R2 3 KEPAITSQNSPEAR 14 1 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 KEPAITS(0.001)QNS(0.999)PEAR;KEPAITS(0.003)QNS(0.997)PEAR;KEPAIT(0.001)S(0.033)QNS(0.966)PEAR 132.25 0.0014779 70043100 113109 126067 91286 116594 101316 102132 113042 75469 97682 100720 TRUE FALSE 121768.712 119806.6961 94329.42968 107067.8972 97337.82477 106018.7048 98199.44961 85333.05742 106178.2038 97433.51465 1.249762081 1.229625109 0.968141507 1.098881608 0.999017896 1.088113317 1.007861104 0.87580806 1.08975032 1 16.57213049 -5.251687145 23.68561765 1.016157265 1.23969369 0.665465979 0.063456075 189.7892279 460942.4522 0.016067013 0.041255004 5.60E-06 5.251687145 0.223536425 KEPVVGGTLS(ph)PLALANK ddPTM_A459_MK2206_30min_R1 2 KEPVVGGTLSPLALANK 17 1 J3KTM2;O15534-4;O15534;J3KRL7 J3KTM2 PER1 Period circadian protein homolog 1 1 KEPVVGGTLS(1)PLALANK;KEPVVGGT(0.024)LS(0.976)PLALANK 172.77 5.55E-09 7212000 7546.3 7018 7027.6 6350 7605.1 6468.7 7576.4 6432.5 6068.1 6162.4 TRUE FALSE 6904.447558 6561.126924 6550.586092 6839.0781 7302.172763 6834.952204 7070.99218 6376.261331 6698.90071 6925.844636 0.996910546 0.947339605 0.945817649 0.987472064 1.054336784 0.98687634 1.020957378 0.920647468 0.967232311 1 12.75777431 -5.874425508 7.537202113 0.991745296 0.961914249 0.11697505 0.034955226 0.514265138 31.95960434 0.010566716 0.015754075 1.34E-06 5.874425508 -0.029831046 KEQSEVS(ph)VSPR ddPTM_A459_MK2206_30min_R1 1 KEQSEVSVSPR 11 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 KEQSEVS(0.958)VS(0.042)PR 155.14 0.0031805 0 1684.6 1882.1 1727.7 1324.3 1614.6 1601.1 1384.3 1534 1476.3 1467.2 TRUE FALSE 1541.315924 1759.574948 1610.428538 1426.297815 1550.287063 1691.752898 1291.955873 1520.5884 1629.766668 1648.967813 0.934715591 1.067076588 0.976628243 0.864964012 0.940156049 1.025946586 0.783493688 0.922145592 0.988355658 1 10.68734752 -5.532208965 24.68370975 0.926481486 1.006135178 0.130176519 0.072371961 273.7851425 724314.1163 0.019386712 0.03363771 2.94E-06 5.532208965 0.079653691 KEQSEVSVS(ph)PR ddPTM_A459_MK2206_30min_R1 2 KEQSEVSVSPR 11 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 KEQSEVS(0.006)VS(0.994)PR;KEQSEVSVS(1)PR 190.34 3.55E-05 45635000 2190.51 2417.05 2489.92 2054.7 2948.3 2748.55 2845.65 2758.18 1938.26 2104.59 TRUE FALSE 2004.195622 2259.699606 2320.911168 2212.95335 2830.862968 2904.170526 2655.821881 2734.065523 2139.749063 2365.322498 0.847324466 0.955345247 0.981223985 0.935582083 1.196819026 1.227811653 1.122815972 1.155895454 0.904633117 1 11.20782118 -6.244140614 23.98959234 1.116522433 0.935356861 0.436476229 0.094419449 455.0782221 631092.902 0.028385877 0.036538785 5.70E-07 6.244140614 -0.181165572 KEQSEVSVS(ph)PR ddPTM_A459_MK2206_30min_R2 2 KEQSEVSVSPR 11 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 KEQSEVSVS(1)PR;KEQSEVS(0.004)VS(0.996)PR 123.1 0.0071129 30863000 39017 44200 37206 44574 40807 38133 41158 37244 31279 37924 TRUE FALSE 42004.17152 42005.09227 38446.42947 40932.16161 39204.71214 39584.17804 35753.90516 42111.91868 33999.59088 36686.54299 1.144947659 1.144972757 1.0479709 1.115726866 1.068640132 1.078983595 0.974578204 1.147884626 0.926759191 1 15.16296334 -1.522879721 0.160100741 0.975480082 1.657338135 0.406078601 0.056758021 64.00480334 0.663219653 0.159152004 10.29011435 0.029999933 1.522879721 0.681858052 KES(ph)APQVLLPEEEK ddPTM_A459_MK2206_30min_R1 2 KESAPQVLLPEEEK 14 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5 B1ALK7 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 KES(1)APQVLLPEEEK;KES(1)APQVLLPEEEK 99.011 0.0051298 10920800 8993.4 13189.6 13849.8 10935.3 8792.9 9764.5 11438.9 10333.6 12477.6 12774.5 TRUE FALSE 8228.464104 12330.95464 12909.71416 11777.5387 8442.660174 10317.35755 10675.83185 10243.25442 13774.69117 14357.1015 0.573128504 0.858874937 0.899186661 0.820328442 0.588047676 0.718623989 0.74359242 0.713462562 0.959433989 1 13.8094769 -8.317705798 5.165683753 0.990878357 0.745758049 0.482570119 0.099478708 0.203939037 11.43377985 0.098364678 0.026315134 4.81E-09 8.317705798 -0.245120308 KES(ph)APQVLLPEEEK ddPTM_A459_MK2206_30min_R2 2 KESAPQVLLPEEEK 14 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5 B1ALK7 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 KES(1)APQVLLPEEEK;KES(1)APQVLLPEEEK 88.264 0.010786 14119100 158227 156667 178734 146756 162335 104267 203397 142336 122309 185514 TRUE FALSE 170340.9808 148887.1446 184692.9024 134765.5654 155960.9122 108234.9537 176690.7296 160939.8039 132947.2157 179460.6934 0.949182674 0.829636517 1.029155181 0.750947535 0.869053325 0.603112312 0.984565067 0.896796958 0.740815235 1 17.45330836 -5.771031913 24.99949863 0.82872497 0.925355978 0.125309978 0.120442604 419.5988544 1093535.018 0.033021299 0.049692534 1.69E-06 5.771031913 0.096631008 KES(ph)KEETPEVTK ddPTM_A459_MK2206_30min_R2 1 KESKEETPEVTK 12 2 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KES(1)KEETPEVTK 56.087 0.04307 7655400 59851 55376 49559 39008 51891 34248 51350 36426 35439 56663 TRUE FALSE 64433.23858 52626.10836 51211.27232 35820.92162 49853.49861 35551.33164 44607.68332 41187.00327 38521.42016 54814.09095 1.175486767 0.960083574 0.934272035 0.653498416 0.909501512 0.648580156 0.813799564 0.751394442 0.702764919 1 15.74225919 -4.869324508 1.169872845 0.773777017 1.313314868 0.542338478 0.10968029 0.941142298 1.209796701 0.031564944 0.600974791 1.35E-05 4.869324508 0.539537851 KES(ph)MPS(ph)LMEKK ddPTM_A459_MK2206_30min_R2 1 KESMPSLMEKK 11 2 Q99578 Q99578 RIT2 GTP-binding protein Rit2 2 KES(1)MPS(1)LMEKK 51.066 0.047616 0 3784.1 4221.5 4956.4 5502.4 4801.1 8051.9 6658.8 4026.4 3805.1 6083.7 TRUE FALSE 4073.813605 4011.866449 5121.643902 5052.836319 4612.58469 8358.320697 5784.491561 4552.664305 4136.06072 5885.189367 0.692214532 0.681688591 0.870259831 0.858568179 0.783761474 1.420229694 0.982889623 0.773579917 0.702791442 1 12.52287312 -5.473658243 1.279033234 0.95042348 0.661115014 0.212061355 0.187010543 0.978547389 2.796733892 0.066449825 0.267791838 3.36E-06 5.473658243 -0.289308466 KES(ph)PS(ph)ST(ph)GS(ph)ST(ph)WK ddPTM_A459_MK2206_30min_R1 1 KESPSSTGSSTWK 13 1 Q6NV74;C9JFM2;C9JXD6;C9JK00 Q6NV74 KIAA1211L Uncharacterized protein KIAA1211-like 5 KES(0.948)PS(0.657)S(0.503)T(0.885)GS(0.583)S(0.583)T(0.841)WK 47.506 0.033606 4351400 937.96 858.81 1146.3 905.71 748.04 840.14 878.7 956.95 1029.1 851.14 TRUE FALSE 858.1815766 802.9013129 1068.49235 975.4679411 718.2439828 887.7080008 820.0835263 948.583487 1136.078628 956.585649 0.897129888 0.839340747 1.116985553 1.019739259 0.750841269 0.927996361 0.85730277 0.991634662 1.187639213 1 9.901750337 -8.019167323 7.504270762 1.093298975 0.918841637 0.322836528 0.102928328 0.222945306 61.39060586 0.067237559 0.027474655 9.57E-09 8.019167323 -0.174457338 KESPS(ph)S(ph)T(ph)GS(ph)S(ph)TWK ddPTM_A459_MK2206_30min_R1 1 KESPSSTGSSTWK 13 1 Q6NV74;C9JFM2;C9JXD6;C9JK00 Q6NV74 KIAA1211L Uncharacterized protein KIAA1211-like 5 KES(0.038)PS(0.973)S(0.984)T(0.986)GS(0.694)S(0.694)T(0.63)WK 42.682 0.0419 6572300 1579.5 1899.1 1889.1 1586.9 1351.8 1120 1213.6 1359.1 1578.3 1022.3 TRUE FALSE 1445.155231 1775.468245 1760.873155 1709.123313 1297.954944 1183.413432 1132.642958 1347.217532 1742.369933 1148.950242 1.257804888 1.545296028 1.53259305 1.487552072 1.129687689 1.029995372 0.985806797 1.172563861 1.516488591 1 10.1661006 -6.263028878 24.54723205 1.134599634 1.46768767 0.486700531 0.159117615 97.10959609 1499700.823 0.050190275 0.059987978 5.46E-07 6.263028878 0.333088036 KESPTS(ph)SSFGK ddPTM_A459_MK2206_30min_R1 1 KESPTSSSFGK 11 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 KES(0.189)PT(0.081)S(0.708)S(0.022)SFGK 132.06 0.0037425 8009400 3087.9 2639.9 2892.3 2509.9 2551.6 2735.7 2662.3 2410.8 2689 2366.2 TRUE FALSE 2825.25789 2468.04203 2695.978734 2703.212933 2449.964369 2890.59297 2484.702825 2389.72263 2968.531173 2659.34272 1.06238954 0.928064672 1.013776342 1.016496638 0.921266879 1.086957671 0.934329677 0.898614012 1.116264989 1 11.376854 KESPTS(ph)SSFGK ddPTM_A459_MK2206_30min_R2 1 KESPTSSSFGK 11 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 KES(0.023)PT(0.083)S(0.694)S(0.186)S(0.014)FGK 114.87 0.011389 6135500 19410 25648 22920 27404 28982 25050 23699 26802 23998 25730 TRUE FALSE 20896.04452 24374.35762 23684.14136 25165.00554 27844.02106 26003.2953 20587.29283 30305.11343 26085.30266 24890.43221 0.83952116 0.979266146 0.951535962 1.01103128 1.118663622 1.044710477 0.827116727 1.217540667 1.048005211 1 14.60330366 -3.546910173 0.661203509 1.044426475 1.78E-17 0.279402003 0.094569678 19.35357786 1.824552706 0.040331206 22.06600109 0.000283851 3.546910173 -1.044426475 KESVS(ph)PEDSEK ddPTM_A459_MK2206_30min_R2 2 KESVSPEDSEK 11 1 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 KES(0.017)VS(0.953)PEDS(0.031)EK;KESVS(0.994)PEDS(0.005)EK 122.33 0.0075129 16504600 42892 44024 32290 33491 32069 25981 56256 41920 21518.2 34550 TRUE FALSE 46175.8445 41837.83218 33366.53248 30754.67817 30809.80993 26969.72516 48869.51962 47399.08793 23389.81414 33422.63633 1.381573974 1.251781331 0.998321382 0.920175113 0.921824647 0.806929917 1.462168308 1.418173224 0.699819545 1 15.02853792 -5.075288936 3.451946674 1.043812791 1.365326838 0.208252756 0.229154534 0.418004678 9.307057352 0.063323183 0.232165967 8.41E-06 5.075288936 0.321514047 KESYS(ph)IYVYK ddPTM_A459_MK2206_30min_R1 2 KESYSIYVYK 10 1 Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 1 KES(0.02)YS(0.98)IYVYK;KES(0.007)YS(0.993)IYVYK 113.07 0.014103 14298400 2670.82 3063.1 2397.62 2589.6 2543.76 2530.66 2160.14 2270.66 2272.59 1726.28 TRUE FALSE 2443.652734 2863.691633 2234.876235 2789.051441 2442.436653 2673.943782 2016.041002 2250.807859 2508.833863 1940.144599 1.259520932 1.476019692 1.151912201 1.437548233 1.258894133 1.378218811 1.039118941 1.160123766 1.293116948 1 10.92194847 -7.252746587 24.97805947 1.136433559 1.327759834 0.432362566 0.114060154 621.1227978 1784750.367 0.041690821 0.031802256 5.59E-08 7.252746587 0.191326274 KESYS(ph)VYVYK ddPTM_A459_MK2206_30min_R2 1 KESYSVYVYK 10 1 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880 U3KQK0 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L 1 KES(0.33)YS(0.67)VYVYK 75.764 0.030366 24212000 141900 197370 131330 179880 115430 134910 186820 164090 102900 118530 TRUE FALSE 152763.9731 187568.8928 135708.4767 165183.2286 110897.6382 140044.0946 162290.3096 185537.1264 111850.056 114662.3758 1.332293806 1.635836441 1.183548446 1.44060532 0.967166757 1.221360482 1.415375431 1.618116885 0.975473037 1 16.80703255 -14.45021821 0.127822201 1.05E-11 1.452237571 0.193683214 0.214294596 271.5851321 2.234479037 70.47026843 1.76748678 3.55E-15 14.45021821 1.452237571 KESYSIYVYK ddPTM_A459_MK2206_30min_R2 1 KESYSIYVYK 10 1 Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 0 157.68 0.00066037 5839100 50729 64649 53327 54213 60180 64107 55483 39066 51416 62492 FALSE TRUE 54612.85124 61438.62467 55104.89556 49783.62448 57817.03082 66546.63681 48198.01545 44172.06033 55888.07074 60452.89116 0.903395192 1.016305813 0.911534494 0.82351106 0.95639811 1.100801559 0.797282223 0.730685654 0.924489626 1 15.88352372 KESYSVYVY(ph)K ddPTM_A459_MK2206_30min_R2 1 KESYSVYVYK 10 1 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880 U3KQK0 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L 1 KES(0.007)YS(0.006)VY(0.021)VY(0.966)K 125.82 0.012592 7751500 20289 22752 15164 20096 19277 16332 24374 19523 15297 16884 TRUE FALSE 21842.34144 21622.16876 15669.56019 18454.09252 18520.08812 16953.5257 21173.66452 22074.72313 16627.50541 16333.07646 1.337307242 1.32382707 0.959375916 1.129860168 1.133900779 1.037987286 1.296367195 1.351534916 1.018026546 1 13.99550894 -5.125194213 10.32324142 1.13329291 1.333832187 0.330474844 0.120264787 0.481011098 37.50600571 0.031543646 0.083724442 7.50E-06 5.125194213 0.200539277 KESYSVYVYK ddPTM_A459_MK2206_30min_R2 2 KESYSVYVYK 10 1 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880 U3KQK0 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L 0 ; 134.98 0.0027269 45921000 346310 376300 353850 418510 413850 379520 382400 301950 315030 358970 FALSE TRUE 372823.7599 357613.4892 365647.1824 384316.3943 397600.1696 393962.8995 332190.4207 341415.9017 342430.74 347256.8383 1.073625394 1.029824181 1.052958911 1.106720882 1.144974341 1.134500047 0.956613043 0.98317978 0.986102222 1 18.40564358 -7.268490654 24.99815906 0.980072072 1.089194982 0.711532353 0.033977747 361.98188 1283291.914 0.016376931 0.011306164 5.39E-08 7.268490654 0.10912291 KET(ph)ESEAEDNLDDLEK ddPTM_A459_MK2206_30min_R1 3 KETESEAEDNLDDLEK 16 1 A9Z1X7;Q8IYB3;Q8IYB3-2 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KET(0.655)ES(0.345)EAEDNLDDLEK;KET(0.935)ES(0.065)EAEDNLDDLEK;KET(0.782)ES(0.218)EAEDNLDDLEK 145.02 0.00048375 285371700 9670.2 12160.4 12179.7 10269 7336.76 6777.64 8460.1 8819.3 10144.5 9525.1 TRUE FALSE 8847.69871 11368.75575 11352.9759 11059.92016 7044.521313 7161.38412 7895.742165 8742.19379 11199.05708 10705.1413 0.826490605 1.061990256 1.060516212 1.033140979 0.658050288 0.6689668 0.737565432 0.816635068 1.046138184 1 13.38601622 -6.239271517 24.62376093 0.800261724 1.004922927 0.278692502 0.134533877 795.1898407 883285.7035 0.041024811 0.052916563 5.76E-07 6.239271517 0.204661203 KET(ph)ESEAEDNLDDLEK ddPTM_A459_MK2206_30min_R2 2 KETESEAEDNLDDLEK 16 1 A9Z1X7;Q8IYB3;Q8IYB3-2 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KET(0.914)ES(0.086)EAEDNLDDLEK;KET(0.617)ES(0.383)EAEDNLDDLEK 123.6 0.0016893 13670900 42571 34504.8 38202.5 38634 36900.3 23057 39401 34187.6 31722.3 42926 TRUE FALSE 45830.26849 32791.34181 39476.15228 35477.47862 35451.40881 23934.45029 34227.60137 38656.0367 34481.44831 41525.32814 1.103670231 0.789670865 0.950652386 0.854357574 0.853729769 0.576381967 0.82425842 0.930902619 0.830371483 1 15.34170395 -4.755012328 24.963474 0.838164308 1.103670683 0.332978889 0.109126069 255.6571897 992909.9843 0.027775885 0.256329955 1.76E-05 4.755012328 0.265506375 KETES(ph)EAEDNLDDLEK ddPTM_A459_MK2206_30min_R1 7 KETESEAEDNLDDLEK 16 1 A9Z1X7;Q8IYB3;Q8IYB3-2 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KET(0.001)ES(0.999)EAEDNLDDLEK;KET(0.027)ES(0.973)EAEDNLDDLEK;KET(0.038)ES(0.962)EAEDNLDDLEK;KET(0.266)ES(0.734)EAEDNLDDLEK;KET(0.017)ES(0.983)EAEDNLDDLEK;KET(0.06)ES(0.94)EAEDNLDDLEK;KET(0.074)ES(0.926)EAEDNLDDLEK 173.43 2.36E-06 1022853700 29954.5 38110.5 37443.2 34093.1 21028.8 18808.7 24751.3 26582 29659.5 27580.9 TRUE FALSE 27406.71248 35629.49952 34901.65991 36718.95647 20191.17837 19873.63234 23100.18594 26349.59638 32742.71116 30997.83012 0.884149386 1.149419149 1.125938808 1.184565382 0.651373928 0.641129791 0.745219451 0.85004648 1.056290425 1 14.91987961 -6.25402743 24.97857408 0.803428796 1.093398301 0.430964624 0.146251918 533.4643445 1797796.025 0.045505203 0.057569667 5.57E-07 6.25402743 0.289969505 KETES(ph)EAEDNLDDLEK ddPTM_A459_MK2206_30min_R2 6 KETESEAEDNLDDLEK 16 1 A9Z1X7;Q8IYB3;Q8IYB3-2 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KET(0.247)ES(0.753)EAEDNLDDLEK;KET(0.051)ES(0.949)EAEDNLDDLEK;KET(0.286)ES(0.714)EAEDNLDDLEK;KET(0.271)ES(0.729)EAEDNLDDLEK;KET(0.428)ES(0.572)EAEDNLDDLEK;KET(0.264)ES(0.736)EAEDNLDDLEK 140.27 0.00020533 697090000 405982 391761 386166 320403 365947 233659 459033 334740 263881 448788 TRUE FALSE 437064.2941 372306.7184 399040.5817 294225.05 351578.082 242551.057 398761.4157 378491.6673 286832.8924 434144.0843 1.006726361 0.857564877 0.919143197 0.677712908 0.809818894 0.558687924 0.918500171 0.871811182 0.66068594 1 18.7278144 -4.990544447 1.309083583 0.781589506 1.033946087 0.192112208 0.128459056 1.502653507 2.973345166 0.037857621 0.460158593 1.02E-05 4.990544447 0.252356581 KETQS(ph)PEQVK ddPTM_A459_MK2206_30min_R1 1 KETQSPEQVK 10 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 KET(0.014)QS(0.986)PEQVK 78.985 0.026271 191270000 23228 24343 23201 19990 12916 13588 22062 21193 3185.3 18054 TRUE FALSE 21252.33662 22758.26628 21626.18076 21529.63326 12401.52837 14357.34082 20590.28423 21007.71184 3516.423334 20290.66582 1.047394739 1.121612592 1.065819178 1.061060956 0.611193762 0.707583524 1.014766317 1.035338713 0.173302511 1 14.30852859 -6.196916874 8.957221369 0.769359149 1.077613666 0.295870882 0.239063794 0.583589411 77.28416473 0.070060108 0.090497996 6.35E-07 6.196916874 0.308254517 KETQS(ph)PEQVK ddPTM_A459_MK2206_30min_R2 3 KETQSPEQVK 10 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 KET(0.043)QS(0.957)PEQVK;KET(0.078)QS(0.922)PEQVK;KET(0.384)QS(0.616)PEQVK 122.1 0.0082093 888333300 230889 316099 229133.3 222163 187116.2 134003.5 245603.3 217208.4 145239.2 260507 TRUE FALSE 248566.0394 300401.9833 236772.4899 204011.5722 179769.0778 139103.0971 213355.2917 245598.2837 157871.8431 252006.6779 0.986347034 1.192039774 0.939548475 0.809548278 0.713350453 0.55198179 0.846625548 0.974570538 0.626458967 1 17.94310244 -5.593606073 2.951069961 0.77602624 1.08874249 0.425791999 0.13946822 0.22940697 4.013956256 0.039649279 0.07971646 2.55E-06 5.593606073 0.31271625 KETSFGS(ph)SENITMTSLSK ddPTM_A459_MK2206_30min_R1 2 KETSFGSSENITMTSLSK 18 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 KET(0.006)S(0.006)FGS(0.881)S(0.107)ENITMTSLSK;KET(0.01)S(0.01)FGS(0.752)S(0.225)ENIT(0.002)MTSLSK 86.825 0.0036506 53740000 15881.8 14314.7 14393.9 13258.2 15623 13992.4 16262.9 16451.9 13801.6 12208.2 TRUE FALSE 14530.96951 13382.81043 13416.88217 14279.34886 15000.70283 14784.6376 15178.03161 16308.06277 15236.32571 13720.64398 1.059058855 0.975377719 0.977860965 1.040720019 1.093294371 1.077546915 1.106218603 1.188578524 1.110467244 1 13.74406058 -6.196007824 2.058891074 1.108342273 1.001077727 0.409091676 0.048876312 0.286847537 2.388502663 0.016405088 0.022312865 6.37E-07 6.196007824 -0.107264546 KETSFGS(ph)SENITMTSLSK ddPTM_A459_MK2206_30min_R2 2 KETSFGSSENITMTSLSK 18 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 KETSFGS(0.782)S(0.217)ENITMTSLSK;KET(0.005)S(0.005)FGS(0.96)S(0.03)ENITMTSLSK 96.679 0.0018993 24274000 114480 144580 142197 152223 159042 131870 173102 133532 145394 157437 TRUE FALSE 123244.6768 137400.3674 146937.777 139785.894 152797.212 136888.4053 150373.4995 150985.0909 158040.1073 152299.8436 0.809223922 0.902170115 0.964792698 0.91783347 1.003265718 0.898808574 0.987351634 0.99136734 1.037690542 1 17.21655493 -2.904652865 0.436299128 0.994022628 1.76E-25 0.69031972 0.036106379 15.08411051 0.597998937 0.024301614 10.99015239 0.00124551 2.904652865 -0.994022628 KETTSGTSTEPVKNSS(ph)PAPPQPAPGK ddPTM_A459_MK2206_30min_R1 1 KETTSGTSTEPVKNSSPAPPQPAPGK 26 2 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 KETTSGTSTEPVKNS(0.169)S(0.831)PAPPQPAPGK 78.354 6.41E-05 33476000 6575.9 6844.6 6441.8 6589.2 6514.2 5350.7 5641.4 6064.2 4335.5 2738.1 TRUE FALSE 6016.585174 6399.015296 6004.548564 7096.701326 6254.72562 5653.65201 5265.072499 6011.181339 4786.19074 3077.3165 1.955140193 2.079414092 1.951228795 2.306133063 2.032525943 1.837201994 1.710929799 1.953384171 1.555313124 1 11.58745712 -8.913778926 0.459308331 0.932916218 2.081759259 0.846424444 0.133093385 0.686699981 0.290695077 0.233792893 0.083776047 1.22E-09 8.913778926 1.148843041 KEVS(ph)PEVVR ddPTM_A459_MK2206_30min_R1 1 KEVSPEVVR 9 1 Q5T200;A0A087WX14;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KEVS(1)PEVVR 101.56 0.030382 55155000 5025.8 5180.1 5030 4302 4197.3 4030.6 4243.3 4417.7 4147.9 3165.9 TRUE FALSE 4598.329318 4842.874548 4688.577614 4633.340785 4030.112653 4258.809089 3960.237199 4379.076515 4579.089048 3558.115593 1.292349615 1.361078476 1.317713686 1.302189506 1.132653661 1.196928255 1.113015329 1.230729132 1.286942183 1 11.79689767 -6.17293603 5.114036181 1.171280339 1.324272487 0.522317486 0.073772025 0.19147627 8.310948292 0.021505205 0.027977235 6.72E-07 6.17293603 0.152992148 KEVS(ph)PEVVR ddPTM_A459_MK2206_30min_R2 2 KEVSPEVVR 9 1 Q5T200;A0A087WX14;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KEVS(1)PEVVR;KEVS(1)PEVVR 64.64 0.046509 166280000 262500 295390 274506 311330 308100 229366 330880 265354 245218 273044 TRUE FALSE 282597.2018 280721.3621 283657.893 285893.3431 296002.4459 238094.6839 287435.0585 300036.6789 266546.6184 264134.5966 1.069898474 1.062796641 1.073914196 1.082377495 1.120650039 0.901414229 1.088214351 1.135923437 1.00913179 1 18.01091375 KEVVEEAENGR ddPTM_A459_MK2206_30min_R1 1 KEVVEEAENGR 11 1 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 0 93.839 0.031165 17764000 2358.6 2380.8 3029.4 2244.8 2686.1 2754.6 3446.6 2846.5 2920.1 2539.4 FALSE TRUE 2157.988684 2225.809487 2823.772768 2417.694885 2579.106949 2910.563072 3216.683603 2821.613351 3223.654845 2854.000043 0.756127769 0.779891189 0.989408804 0.847125034 0.903681468 1.01981886 1.127079031 0.988652175 1.129521652 1 11.47876964 -5.651928467 0.501493388 1.073861157 0.6879707 0.681798989 0.069794575 1.228214428 0.437335115 0.052552203 0.255540248 2.23E-06 5.651928467 -0.385890457 KEVVEEAENGR ddPTM_A459_MK2206_30min_R2 1 KEVVEEAENGR 11 1 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 0 106.67 0.014867 12331000 45035 45690 46413 53322 40753 34312 54770 45430 34431 47932 FALSE TRUE 48482.91423 43421.10104 47960.38626 48965.42203 39152.83245 35617.7672 47578.63321 51367.85698 37425.74614 46367.98277 1.045611893 0.936445764 1.034342738 1.056017948 0.844393698 0.76815434 1.026109621 1.107830316 0.807146309 1 15.50084134 -6.24307582 24.90608106 0.928149849 1.013431679 0.164688445 0.101741049 1765.527173 2394543.999 0.031845735 0.041038095 5.71E-07 6.24307582 0.08528183 KEYEEDDILAS(ph)DDPSSIEQYENTR ddPTM_A459_MK2206_30min_R1 2 KEYEEDDILASDDPSSIEQYENTR 24 1 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 KEYEEDDILAS(1)DDPSSIEQYENTR;KEYEEDDILAS(1)DDPSSIEQYENTR 113.65 3.27E-07 8754400 4625.05 4678.08 4306.34 3804.33 4410.94 3838.29 4895.88 4651.95 4220.09 3753.6 TRUE FALSE 4231.66521 4373.536142 4014.037639 4097.340156 4235.242919 4055.610663 4569.284778 4611.278492 4658.783457 4218.624306 1.003091269 1.036720937 0.951503938 0.971250308 1.003939344 0.961358578 1.083121996 1.093076358 1.10433713 1 12.0425569 -7.270173829 24.88067345 1.077890241 0.988500347 0.566638617 0.034933902 415.4270051 1183367.172 0.014255055 0.009774442 5.37E-08 7.270173829 -0.089389894 KEYEEDDILAS(ph)DDPSSIEQYENTR ddPTM_A459_MK2206_30min_R2 3 KEYEEDDILASDDPSSIEQYENTR 24 1 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 KEYEEDDILAS(1)DDPSSIEQYENTR;KEY(0.002)EEDDILAS(0.997)DDPS(0.001)SIEQYENTR;KEYEEDDILAS(0.994)DDPS(0.003)S(0.003)IEQYENTR 111.5 1.61E-07 10588100 117948 144541 139668 143577 152492 127020 162033 115076 124146 143048 TRUE FALSE 126978.1896 137363.3041 144324.4614 131846.2998 146504.3979 131853.8351 140757.8725 130116.8283 134943.9947 138380.3555 0.917602713 0.99265032 1.042954839 0.952781913 1.058708061 0.952836367 1.01718103 0.940283958 0.975167279 1 17.07827963 -4.761404201 23.89568142 0.992576161 0.91760287 0.268280994 0.037111097 0.651157267 430764.3686 0.008796033 0.049175476 1.73E-05 4.761404201 -0.074973291 KFAETQPK ddPTM_A459_MK2206_30min_R2 1 KFAETQPK 8 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 85.862 0.046922 7967100 63838 73337 64200 80232 74618 64674 77640 59190 64264 78828 FALSE TRUE 68725.48636 69695.19122 66340.39596 73676.78895 71688.12239 67135.21439 67445.77474 66926.33623 69853.56656 76255.84882 0.901248723 0.913965188 0.869971248 0.966178858 0.940099986 0.880394297 0.884466907 0.877655121 0.916042083 1 16.21856038 -8.564212336 21.04173738 1.000000001 0.904709833 0.502497476 0.028404741 2454.206215 1249364.234 0.029168453 0.007531262 2.73E-09 8.564212336 -0.095290167 KFDQLLAEEK ddPTM_A459_MK2206_30min_R1 2 KFDQLLAEEK 10 1 P35579;A0A0C4DFM8;P35579-2;P35749-4;P35749-3;P35749;P35749-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4;Q7Z406;Q7Z406-6;Q7Z406-2;A1L2Z2 P35579;P35579-2;P35749-4;P35580;Q7Z406 MYH9;MYH14;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10;Myosin-14 0 ; 130.1 0.003838 18161100 12453.6 13377 13550.5 12208.4 13010.1 12805.8 11503 12618.5 11622 11611.5 FALSE TRUE 11394.35592 12506.15487 12630.72981 13148.69308 12491.88017 13530.85333 10735.65586 12508.17778 12830.14849 13050.02028 0.873129365 0.958324554 0.967870512 1.007561122 0.957230709 1.036845387 0.822654343 0.958479567 0.983151613 1 13.67176443 -8.793618154 0.005003054 1.933680807 1.79E-07 0.060487354 0.058693816 35746.57965 91.04141089 17763.87602 17418.20525 1.61E-09 8.793618154 -1.933680628 KFDQLLAEEK ddPTM_A459_MK2206_30min_R2 2 KFDQLLAEEK 10 1 P35579;A0A0C4DFM8;P35579-2;P35749-4;P35749-3;P35749;P35749-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4;Q7Z406;Q7Z406-6;Q7Z406-2;A1L2Z2 P35579;P35579-2;P35749-4;P35580;Q7Z406 MYH9;MYH14;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10;Myosin-14 0 ; 142.89 0.0015551 8143200 76357 82988 81333 86200 89205 74655 98449 62648 73520 88319 FALSE TRUE 82202.95063 78866.9366 84044.60163 79157.18426 85702.36348 77496.04834 85522.52804 70836.3087 79914.63671 85437.15826 0.962145187 0.92309878 0.983700808 0.926495987 1.003104097 0.907053206 1.000999211 0.829104223 0.935361596 1 16.38257604 -7.718028942 24.99999934 0.911672908 0.956278593 0.092372498 0.049568608 239.1347052 137716.9238 0.021427982 0.012371341 1.91E-08 7.718028942 0.044605685 KFEEFQTDMAAHEER ddPTM_A459_MK2206_30min_R1 1 KFEEFQTDMAAHEER 15 1 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 122.33 0.0010604 3114100 2340.1 2481.6 2230.7 1795.8 2709.3 2224.5 2944.6 2114.5 2129.8 2321.2 FALSE TRUE 2141.062207 2320.047389 2079.286299 1934.112827 2601.382844 2350.449268 2748.171107 2096.013149 2351.200332 2608.76778 0.82071782 0.88932691 0.797037711 0.741389418 0.997169186 0.900980641 1.053436464 0.803449493 0.901268541 1 11.34915281 -6.265617715 24.99942298 0.936338978 0.816555729 0.434072016 0.07276574 389.8852757 2332720.438 0.022636565 0.026584928 5.42E-07 6.265617715 -0.11978325 KFELLPTPPLS(ph)PSR ddPTM_A459_MK2206_30min_R1 2 KFELLPTPPLSPSR 14 1 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1;P04198 H0YBT0 MYC;MYCN Myc proto-oncogene protein;N-myc proto-oncogene protein 1 KFELLPT(0.011)PPLS(0.495)PS(0.495)R;KFELLPT(0.161)PPLS(0.692)PS(0.148)R 90.442 0.0093657 17392800 5427.1 6628.8 6118.2 5675.4 6661.5 8383.1 10190 10830.4 12802 13089.6 TRUE FALSE 4965.496646 6197.263915 5702.91363 6112.520291 6396.158349 8857.743877 9510.243693 10735.71095 14132.81371 14711.23847 0.337530838 0.421260516 0.387656936 0.415500048 0.434780414 0.602107287 0.64646112 0.729762554 0.960681437 1 13.84463108 -7.647552173 0.680516645 1.019857303 0.372761923 0.968610656 0.04024322 0.108605436 0.098262174 0.03640379 0.019409882 2.25E-08 7.647552173 -0.64709538 down KFELLPTPPLS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 KFELLPTPPLSPSR 14 1 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1;P04198 H0YBT0 MYC;MYCN Myc proto-oncogene protein;N-myc proto-oncogene protein 1 KFELLPT(0.012)PPLS(0.896)PS(0.092)R;KFELLPT(0.064)PPLS(0.628)PS(0.309)R 104.84 0.0030967 11292600 52918 64796 58610 60750 72627 82989 130903 114175 122958 147328 TRUE FALSE 56969.44277 61578.32486 60564.02815 55786.53067 69775.29906 86147.20455 113715.2789 129098.0645 133652.6646 142520.6994 0.399727499 0.432065834 0.424948996 0.391427567 0.489580105 0.604453984 0.797886057 0.905819751 0.937777215 1 17.12081194 -7.241841187 1.107131959 0.975503487 0.407750886 0.994130812 0.017913215 0.035434142 0.084847942 0.012771794 0.007379918 5.73E-08 7.241841187 -0.567752601 down KFELLPTPPLS(ph)PSRR ddPTM_A459_MK2206_30min_R1 1 KFELLPTPPLSPSRR 15 2 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1 H0YBT0 MYC Myc proto-oncogene protein 1 KFELLPTPPLS(0.5)PS(0.5)RR 85.203 0.0082036 9735100 8336.7 9778.5 9556.9 9626.9 10770 11538 12770 14237 12797 10631 TRUE FALSE 7627.619887 9141.917873 8908.204255 10368.36551 10341.00809 12191.27159 11918.1366 14112.52741 14127.29394 11948.04854 0.638398803 0.765138997 0.745578177 0.867787361 0.865497663 1.020356718 0.9974965 1.181157522 1.182393417 1 13.54448738 -6.476426905 0.718176933 1.132069815 0.682723864 0.852381278 0.066383578 0.253390152 0.290364185 0.042994858 0.059475877 3.34E-07 6.476426905 -0.449345951 KFELLPTPPLS(ph)PSRR ddPTM_A459_MK2206_30min_R2 2 KFELLPTPPLSPSRR 15 2 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1 H0YBT0 MYC Myc proto-oncogene protein 1 KFELLPTPPLS(0.5)PS(0.5)RR;KFELLPTPPLS(0.5)PS(0.5)RR 77.899 0.013309 8007600 43844 66266 56540 58880 71768 93565 118109 100393 126038 124210 TRUE FALSE 47200.73035 62975.3268 58425.01538 54069.31565 68950.02771 97125.68164 102601.1464 113514.7098 137000.5574 120157.0379 0.392825349 0.524108516 0.486238812 0.449988753 0.573832619 0.808322869 0.853892109 0.944719609 1.140179217 1 16.87456163 -7.038449554 0.961807353 1.051855158 0.450476569 0.943357518 0.05952026 0.119624879 0.227011574 0.040370045 0.028123574 9.15E-08 7.038449554 -0.60137859 down KFGDPVVQSDMK ddPTM_A459_MK2206_30min_R2 1 KFGDPVVQSDMK 12 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 96.734 0.022796 4576800 65470 87467 73998 90477 84948 79471 91247 72485 68549 86283 FALSE TRUE 70482.43354 83123.51597 76465.05639 83084.73968 81612.51469 82495.32459 79266.15929 81959.03838 74511.26811 83467.59278 0.844428732 0.99587772 0.916104728 0.995413153 0.97777487 0.988351549 0.949663895 0.981926466 0.892696981 1 16.34892854 -4.752611012 24.9993278 0.965708211 0.844428501 0.528650955 0.034552043 261.0402012 739134.2798 0.008073033 0.094316744 1.77E-05 4.752611012 -0.12127971 KFGYVDFESAEDLEK ddPTM_A459_MK2206_30min_R1 2 KFGYVDFESAEDLEK 15 1 P19338 P19338 NCL Nucleolin 0 ; 218.63 3.73E-09 51007000 12871.4 14874.9 13497.8 13887.5 13449.8 11432.6 11828 12121.1 10583.9 9956 FALSE TRUE 11776.61984 13906.54131 12581.60694 14957.11766 12914.06599 12079.90393 11038.9757 12015.1265 11684.13428 11189.42444 1.052477712 1.24282901 1.124419491 1.336719125 1.15413139 1.079582242 0.986554381 1.073793077 1.044212268 1 13.44984821 -6.795643647 3.175574877 1.033060561 1.193427424 0.506094591 0.073173846 0.201663975 4.182319881 0.026205294 0.023900137 1.60E-07 6.795643647 0.160366863 KFNHDGEEEEEDDDYGSR ddPTM_A459_MK2206_30min_R1 1 KFNHDGEEEEEDDDYGSR 18 1 Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4;G3V5I6;Q6PJT7-9;Q6PJT7-2;H0YJA2;Q6PJT7-3;Q6PJT7-11 Q6PJT7-5;Q6PJT7-9 ZC3H14 Zinc finger CCCH domain-containing protein 14 0 64.454 0.023806 6013400 1457.7 1508.1 1442.5 1155.3 1538.4 1527.1 1416.4 1590.4 1039.5 1117 FALSE TRUE 1333.71496 1409.922416 1344.587119 1244.281406 1477.12227 1613.563082 1321.91454 1576.4953 1147.559745 1255.382393 1.062397376 1.123101952 1.071057812 0.991157287 1.176631343 1.285316005 1.052997515 1.255788921 0.914111709 1 10.29391116 -4.747801895 22.73344681 1.107607386 1.062397033 0 0.112000524 1415.081541 2358456.588 0.027051658 0.462938793 1.79E-05 4.747801895 -0.045210353 KFPVFNPATEEELCQVEEGDKEDVDK ddPTM_A459_MK2206_30min_R1 2 KFPVFNPATEEELCQVEEGDKEDVDK 26 2 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 154.42 5.34E-12 122201000 9274.9 12596.5 12409.8 11678.6 6163.4 6820.6 8061.7 8520.3 9545.6 9264.5 FALSE TRUE 8486.021051 11776.46556 11567.45735 12578.0878 5917.898727 7206.776478 7523.918702 8445.807915 10537.89928 10412.2562 0.815003097 1.131019573 1.110946285 1.208007904 0.568358923 0.692143599 0.722602148 0.811141001 1.012066844 1 13.3459951 -6.251667416 24.98611054 0.782241211 1.074064029 0.401421546 0.157528335 663.2810736 1695954.807 0.047584381 0.060659829 5.60E-07 6.251667416 0.291822818 KFPVFNPATEEELCQVEEGDKEDVDK ddPTM_A459_MK2206_30min_R2 4 KFPVFNPATEEELCQVEEGDKEDVDK 26 2 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ;;; 126.9 4.46E-09 33998900 186255 177629 181485 149203 161084 94307.3 214854 164373 125313.4 208780 FALSE TRUE 200514.826 168808.2022 187535.6193 137012.6376 154759.0328 97896.23039 186643.4117 185857.1155 136212.933 201967.5257 0.992807261 0.835818539 0.928543431 0.678389445 0.766257012 0.484712728 0.924125852 0.92023267 0.674429875 1 17.62376382 -5.742033238 24.97259052 0.768323786 0.910732692 0.161666882 0.145270035 449.1805697 578018.8293 0.03958762 0.068439094 1.81E-06 5.742033238 0.142408906 KFQEQECPPS(ph)PEPTR ddPTM_A459_MK2206_30min_R1 2 KFQEQECPPSPEPTR 15 1 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 KFQEQECPPS(0.853)PEPT(0.147)R;KFQEQECPPS(0.927)PEPT(0.073)R 111.63 0.0016467 31243000 6042 6866.8 4913.1 5420.1 6586 6587 7892.7 6705.8 7846.7 7980.4 TRUE FALSE 5528.096172 6419.770072 4579.612461 5837.557041 6323.665674 6959.950248 7366.192384 6647.171898 8662.392545 8969.072201 0.61635095 0.715767465 0.510600468 0.650854058 0.705052377 0.77599445 0.821288113 0.741121461 0.965806981 1 13.13074304 -7.661295674 0.492594221 1.006106869 0.604500112 0.788598365 0.065526069 0.420765996 0.235602592 0.068201189 0.049728506 2.18E-08 7.661295674 -0.401606757 KFQEQECPPS(ph)PEPTR ddPTM_A459_MK2206_30min_R2 1 KFQEQECPPSPEPTR 15 1 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 KFQEQECPPS(0.99)PEPT(0.01)R 94.188 0.0060067 19629000 47687 26740 31790 32038 29411 41577 61030 32254 49928 45406 TRUE FALSE 51337.95339 25412.13048 32849.86273 29420.39292 28256.17636 43159.24187 53016.68769 36469.70854 54270.64719 43924.40594 1.168779686 0.578542383 0.74787267 0.669796035 0.643291031 0.982579979 1.2069984 0.830283478 1.235546527 1 15.42273515 -6.895946544 5.540079911 1.059257964 0.746929355 0.39060489 0.182363249 0.208561711 9.525839269 0.0622912 0.054857771 1.27E-07 6.895946544 -0.312328609 KFQEQECPPS(ph)PEPTRK ddPTM_A459_MK2206_30min_R2 2 KFQEQECPPSPEPTRK 16 2 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 KFQEQECPPS(0.991)PEPT(0.009)RK;KFQEQECPPS(0.959)PEPT(0.041)RK 79.341 0.028064 15307100 17969.2 14250.8 15085.3 15576.6 18803.2 21151.6 30767 16951.8 25989 22915.4 TRUE FALSE 19344.93577 13543.12599 15588.23637 14303.94195 18064.89189 21956.53896 26727.25594 19167.45846 28249.47624 22167.67237 0.872664276 0.610940371 0.703196804 0.645261339 0.814920556 0.990475616 1.205686167 0.864658145 1.274354644 1 14.43616967 -6.721075868 2.579364 1.07731205 0.702323459 0.665755322 0.122389849 0.158586287 2.159377677 0.042660664 0.040491528 1.90E-07 6.721075868 -0.37498859 KFS(ph)EPNTYIDGLPSQDR ddPTM_A459_MK2206_30min_R2 2 KFSEPNTYIDGLPSQDR 17 1 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 KFS(0.986)EPNT(0.013)Y(0.001)IDGLPSQDR;KFS(0.997)EPNT(0.001)Y(0.001)IDGLPSQDR 61.304 0.029126 10952600 58057 45457 47811 43754 34270 26873 36191 29329 36394 40343 TRUE FALSE 62501.88856 43199.67148 49404.99488 40179.15824 32924.38761 27895.67085 31439.07823 33162.401 39559.48433 39026.61121 1.601519748 1.106928584 1.265930947 1.029532337 0.843639419 0.714785885 0.805580532 0.849738165 1.013654097 1 15.25217057 -4.588178766 0.67998869 0.85368351 2.123932784 0.743221176 0.124728558 2.039838088 0.595047947 0.056740209 2.126243627 2.58E-05 4.588178766 1.270249274 KFSGFSAKPNNSGEAPS(ph)SPTPK ddPTM_A459_MK2206_30min_R1 1 KFSGFSAKPNNSGEAPSSPTPK 22 2 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 KFSGFSAKPNNS(0.001)GEAPS(0.484)S(0.484)PT(0.031)PK 44.735 0.035597 80818000 5960.7 7056.3 7116.9 6068.8 5881 4739.5 5187.1 6040.1 5883.1 5076.6 TRUE FALSE 5453.711164 6596.933587 6633.824657 6536.220028 5646.747317 5007.846394 4841.078023 5987.292043 6494.669298 5705.527534 0.95586449 1.156235519 1.162701366 1.145594336 0.989697672 0.877718382 0.848489118 1.04938448 1.138311797 1 12.47814457 -6.317763601 6.489945645 0.97357677 1.112736273 0.279727042 0.094167374 0.300042469 27.76933661 0.031612417 0.036087631 4.81E-07 6.317763601 0.139159503 KFSGFSAKPNNSGEAPSS(ph)PTPK ddPTM_A459_MK2206_30min_R1 2 KFSGFSAKPNNSGEAPSSPTPK 22 2 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 KFSGFSAKPNNSGEAPS(0.173)S(0.766)PT(0.06)PK;KFSGFSAKPNNSGEAPS(0.139)S(0.813)PT(0.048)PK 97.068 0.00021372 138954000 9665.2 10071 10333.2 9525.1 6945.5 6081.4 7638.4 8524 7528.4 6763.1 TRUE FALSE 8843.123986 9415.37607 9631.811174 10258.72485 6668.846028 6425.723613 7128.856273 8449.475567 8311.004121 7600.963887 1.163421392 1.23870817 1.267182862 1.349661044 0.877368466 0.845382731 0.937888455 1.111632116 1.093414499 1 12.89196666 -6.261184258 24.9999756 0.974598103 1.254486535 0.700455808 0.08876934 14.77596737 1447931.97 0.030469737 0.036899051 5.48E-07 6.261184258 0.279888432 KFSGFSAKPNNSGEAPSS(ph)PTPK ddPTM_A459_MK2206_30min_R2 2 KFSGFSAKPNNSGEAPSSPTPK 22 2 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 KFSGFSAKPNNSGEAPS(0.106)S(0.646)PT(0.248)PK;KFSGFSAKPNNSGEAPS(0.168)S(0.744)PT(0.088)PK 69.024 0.0019142 141620000 425440 529430 486200 501780 521420 369530 599720 426450 389810 504110 TRUE FALSE 458012.0135 503139.2761 502409.6653 460782.9689 500946.4309 383592.7231 520976.0436 482188.4792 423714.9692 487660.932 0.939201776 1.031739971 1.030243828 0.944883911 1.027243312 0.786597199 1.068316138 0.98877816 0.868872082 1 18.89551887 KFTNFQSPNIDPTEENDLDDSLS(ph)VK ddPTM_A459_MK2206_30min_R1 1 KFTNFQSPNIDPTEENDLDDSLSVK 25 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9 Q6ULP2-7 AFTPH Aftiphilin 1 KFTNFQSPNIDPT(0.001)EENDLDDS(0.007)LS(0.992)VK 137.82 1.74E-08 8618700 3523.1 4006.9 3191.2 3588.6 2876.6 2676.3 3520.6 3277.8 3528.4 3564.6 TRUE FALSE 3223.441844 3746.050082 2974.590235 3864.994594 2762.018931 2827.829793 3285.747198 3249.14254 3895.189807 4006.209559 0.804611391 0.935060941 0.742494917 0.964750979 0.689434462 0.705861676 0.820163586 0.811026606 0.972288081 1 11.96802217 -8.295656274 4.025540303 0.997132008 0.808546981 0.41941381 0.083519646 0.217165981 7.52959884 0.077093172 0.021534376 5.06E-09 8.295656274 -0.188585027 KGAANASGS(ph)SPDAPAK ddPTM_A459_MK2206_30min_R1 1 KGAANASGSSPDAPAK 16 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 KGAANAS(0.004)GS(0.498)S(0.498)PDAPAK 222.51 9.25E-11 6817700 4038.6 4190.6 3314.1 3148.6 3274.7 3062.6 3246.6 2976.6 2857.9 2923.6 TRUE FALSE 3695.095862 3917.791178 3089.148126 3391.105718 3144.261765 3236.001765 3030.025238 2950.5759 3154.988932 3285.79764 1.124565864 1.19234098 0.940151666 1.032049471 0.956924957 0.984845118 0.9221582 0.89797858 0.960189664 1 11.68202792 -5.263920726 24.99003804 0.959887471 1.158453432 0.80075861 0.039230818 83.34365218 839375.368 0.010597833 0.023830116 5.45E-06 5.263920726 0.198565961 KGAANASGS(ph)SPDAPAKDAR ddPTM_A459_MK2206_30min_R1 1 KGAANASGSSPDAPAKDAR 19 2 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 KGAANASGS(0.5)S(0.5)PDAPAKDAR 91.774 0.009705 0 830.83 626.53 794.86 965.73 1039.4 850.33 759.22 737.28 428.34 304.1 TRUE FALSE 760.1635456 585.7427831 740.9071178 1040.110692 997.998497 898.4749498 708.5738191 730.8340387 472.8674758 341.7742038 2.224168873 1.713829706 2.167826329 3.043268568 2.920052145 2.628855366 2.07322206 2.138353423 1.3835669 1 8.4168997 -8.272382662 1.447009495 0.992997528 2.431029951 0.63214537 0.37031638 0.291231494 1.184129562 0.401711386 0.123681189 5.34E-09 8.272382662 1.438032422 KGAANASGSS(ph)PDAPAK ddPTM_A459_MK2206_30min_R1 1 KGAANASGSSPDAPAK 16 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 KGAANAS(0.003)GS(0.031)S(0.966)PDAPAK 214.54 2.09E-08 7009500 3685.9 3518.9 3452.2 2828.9 3450.8 2651.9 3046.6 3014.1 2444.6 2901.1 TRUE FALSE 3372.39485 3289.81897 3217.874282 3046.782368 3313.347329 2802.048286 2843.366873 2987.748041 2698.724918 3260.51017 1.034315084 1.008989023 0.986923553 0.934449583 1.016205181 0.859389525 0.872061955 0.916343727 0.827700199 1 11.670882 -6.759515616 24.99974442 0.888430738 0.992944976 0.512918525 0.048983954 40.25468218 523120.5267 0.015954115 0.015192109 1.74E-07 6.759515616 0.104514238 KGAANASGSS(ph)PDAPAK ddPTM_A459_MK2206_30min_R2 3 KGAANASGSSPDAPAK 16 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 KGAANAS(0.006)GS(0.073)S(0.921)PDAPAK;KGAANAS(0.001)GS(0.018)S(0.981)PDAPAK;KGAANAS(0.004)GS(0.082)S(0.913)PDAPAK 114.21 0.0010978 47705800 95619 94450 93970 101915 111089 93223 117683 84802 89601 99974 TRUE FALSE 102939.6642 89759.75034 97102.9129 93588.21849 106727.0877 96770.66659 102231.0807 95885.91257 97394.33302 96711.85657 1.064395492 0.928115265 1.00404352 0.967701602 1.103557428 1.000608095 1.057068744 0.991459744 1.007056802 1 16.56140515 KGAGDGS(ph)DEEVDGK ddPTM_A459_MK2206_30min_R1 14 KGAGDGSDEEVDGK 14 1 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK 190.18 0.00013095 3993231800 73845.1 100996.1 84288.4 69284.9 45625.9 45620.05 71076.8 63736.9 52240.8 109882.8 TRUE FALSE 67564.18647 94421.23553 78567.13825 74621.235 43808.52379 48203.01781 66335.39636 63179.655 57671.41811 123495.9108 0.547096548 0.764569733 0.636192225 0.604240533 0.354736635 0.39032076 0.537146501 0.511593093 0.466990508 1 16.91410375 -12.49018549 11.93081022 0.987968745 0.562151641 0 0.180263227 0 0 0 0.04060141 3.23E-13 12.49018549 -0.425817104 KGAGDGS(ph)DEEVDGK ddPTM_A459_MK2206_30min_R2 17 KGAGDGSDEEVDGK 14 1 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK 198.95 0.00012859 3935915300 965719 673903.8 755972 590390.7 592672.6 367385.8 835293 652604.2 443745.2 884971 TRUE FALSE 1039655.189 640438.7172 781175.7292 542153.8912 569401.2958 381366.9241 725618.0257 737901.8097 482341.3554 856094.4687 1.214416431 0.748093511 0.912487766 0.63328746 0.665115027 0.445472945 0.847591069 0.8619397 0.563420712 1 19.70741048 -2.330730268 1.189095285 0.715699852 199.9999983 0.424399825 0.16266037 586.1859909 2.734301299 0.047604835 316445.2015 0.004669493 2.330730268 199.2842984 KGAGDGS(ph)DEEVDGKADGAEAK ddPTM_A459_MK2206_30min_R1 2 KGAGDGSDEEVDGKADGAEAK 21 2 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK 81.525 0.0019859 37051000 13510.8 16375.5 16970.1 15018.8 8677.4 7418.4 9619.6 12896.1 13661 11454.5 TRUE FALSE 12361.63551 15309.45197 15818.21689 16175.55058 8331.760783 7838.423397 8977.894036 12783.35076 15081.10984 12873.56994 0.960233686 1.189215738 1.22873585 1.256493005 0.647198937 0.608877214 0.697389619 0.992991907 1.171478456 1 13.65212456 -6.251252539 24.9521942 0.832653355 1.165856183 0.404437073 0.180631226 719.2964826 1761882.68 0.058779511 0.075013276 5.61E-07 6.251252539 0.333202828 KGAGDGS(ph)DEEVDGKADGAEAK ddPTM_A459_MK2206_30min_R2 4 KGAGDGSDEEVDGKADGAEAK 21 2 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK 122.87 8.17E-05 92950000 228159 190200 220080 156123 172765 83226 227903 178007 111423 232254 TRUE FALSE 245627.0285 180754.9446 227417.3574 143367.2515 165981.378 86393.22375 197979.0623 201273.1261 121114.3711 224675.571 1.093252049 0.804515345 1.012203313 0.638107876 0.738760237 0.384524332 0.881177519 0.895838943 0.539063373 1 17.77748374 -5.758970658 24.99999999 0.713863238 0.953442777 0.270908706 0.18263083 87.77831434 888881.0668 0.049443566 0.080756898 1.74E-06 5.758970658 0.23957954 KGAGDGS(ph)DEEVDGKADGAEAKPAE ddPTM_A459_MK2206_30min_R1 5 KGAGDGSDEEVDGKADGAEAKPAE 24 3 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE 78.607 0.0013037 2551173000 19940.4 26841.4 21773 24080.1 13274.39 10923.75 13838.9 20070 17521.47 14725.93 TRUE FALSE 18244.36427 25094.01998 20295.10942 25934.75347 12745.64294 11542.24328 12915.73223 19894.53011 19342.88951 16550.28938 1.10235923 1.516228472 1.226269158 1.56702719 0.770116017 0.697404318 0.780393136 1.202065393 1.168734217 1 14.01456882 -6.265901858 24.99468143 0.926800101 1.355582129 0.516237642 0.197390142 327.3648557 1833593.008 0.06447071 0.075588827 5.42E-07 6.265901858 0.428782028 KGAGDGS(ph)DEEVDGKADGAEAKPAE ddPTM_A459_MK2206_30min_R2 6 KGAGDGSDEEVDGKADGAEAKPAE 24 3 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE 71.946 0.0044152 4621909000 264235 332130 350753 264405 335706 162488.7 387717 281530 255459 335163 TRUE FALSE 284465.0348 315636.9072 362446.93 242802.2657 322524.4957 168672.3213 336809.2922 318326.9376 277678.3621 324226.6588 0.87736473 0.973506955 1.117881334 0.748865829 0.994750083 0.52022965 1.03880814 0.981803714 0.856432852 1 18.30664319 -5.763109294 24.99999943 0.873260948 0.987976577 0.099103023 0.154828256 105.5788111 1580643.901 0.042718533 0.0673009 1.73E-06 5.763109294 0.114715629 KGAGDGSDEEVDGK ddPTM_A459_MK2206_30min_R2 1 KGAGDGSDEEVDGK 14 1 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 87.519 0.029707 5153700 65746 64824 50498 44423 62007 40944 59634 50168 51106 55306 FALSE TRUE 70779.56431 61604.93442 52181.57812 40793.4988 59572.29362 42502.15261 51803.98417 56725.12985 55551.1075 53501.36975 1.322948639 1.151464621 0.975331629 0.762475783 1.113472307 0.79441242 0.968273979 1.060255655 1.038311874 1 15.70728821 -5.019264041 2.494873794 0.958243706 1.327630665 0.550983911 0.104244467 0.251585957 2.727107455 0.027812778 0.158940517 9.57E-06 5.019264041 0.369386959 KGAILSEEELAAMS(ph)PTAAAVAK ddPTM_A459_MK2206_30min_R1 2 KGAILSEEELAAMSPTAAAVAK 22 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 KGAILSEEELAAMS(0.617)PT(0.383)AAAVAK;KGAILSEEELAAMS(0.962)PT(0.038)AAAVAK 124.82 1.64E-05 42873000 17393.3 16288.1 16708.7 16360.8 18008.1 14195.4 14408.1 18176.1 11557.3 8058.7 TRUE FALSE 15913.9085 15227.74173 15574.56 17620.91165 17290.79924 14999.13128 13446.96194 18017.18827 12758.72269 9057.072596 1.757069774 1.681309448 1.719601983 1.945541616 1.909093591 1.656068351 1.484691858 1.989294894 1.408702708 1 13.14482911 -8.535421196 4.860801254 1.000434693 1.759298743 0.742515504 0.143047198 0.079427346 7.5803683 0.141603533 0.036861562 2.91E-09 8.535421196 0.75886405 KGAILSEEELAAMS(ph)PTAAAVAK ddPTM_A459_MK2206_30min_R2 1 KGAILSEEELAAMSPTAAAVAK 22 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 KGAILSEEELAAMS(0.526)PT(0.474)AAAVAK 71.434 0.0018088 7007200 32286 58175 46591 63574 59375 63019 62424 50233 54288 48396 TRUE FALSE 34757.84098 55286.11409 48144.32069 58379.80084 57043.63916 65417.2322 54227.65382 56798.62558 59009.87211 46816.84248 0.742421726 1.180902239 1.028354715 1.246982875 1.218442683 1.397301243 1.158293702 1.213209233 1.260441093 1 15.51474002 -4.342769476 1.328070658 1.215359362 9.25E-28 0.583211168 0.110995648 2.549865838 1.816422255 0.030960975 5.567460421 4.54E-05 4.342769476 -1.215359362 KGDRS(ph)PEPGQTWTR ddPTM_A459_MK2206_30min_R1 3 KGDRSPEPGQTWTR 14 2 Q09666;E9PKR9;E9PLK4;E9PJZ0;E9PJC6;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 KGDRS(1)PEPGQTWTR;KGDRS(0.848)PEPGQT(0.151)WT(0.001)R;KGDRS(0.999)PEPGQT(0.001)WTR 99.915 0.010578 1221050000 12085.9 12319.6 12337.2 11333.2 11878.3 10864.6 11661.3 12725.9 9120.6 7801.6 TRUE FALSE 11057.93074 11517.5918 11499.78524 12206.08503 11405.16216 11479.74426 10883.39595 12614.6388 10068.71901 8768.121107 1.261151689 1.313575812 1.311544982 1.392098134 1.300753265 1.309259318 1.24124608 1.438693495 1.148332566 1 13.09805201 -8.510619866 5.335309979 1.000246332 1.318486573 0.784591822 0.054533244 0.0587065 6.390076757 0.050187673 0.013036556 3.09E-09 8.510619866 0.318240242 KGDS(ph)SAEELK ddPTM_A459_MK2206_30min_R1 2 KGDSSAEELK 10 1 P26373-2;P26373 P26373-2 RPL13 60S ribosomal protein L13 1 KGDS(0.676)S(0.324)AEELK;KGDS(0.5)S(0.5)AEELK 113.69 0.013417 14079700 6587.3 7897.3 6886.3 5904.6 2971.5 3762.5 6260.4 6189.1 1294.44 5609.5 TRUE FALSE 6027.015544 7383.184335 6418.877142 6359.373315 2853.138863 3975.529499 5842.780139 6134.989351 1429.00167 6304.44721 0.955994292 1.171107329 1.018150669 1.008712279 0.45255972 0.63059129 0.926771205 0.973120901 0.226665657 1 12.62215416 -6.104832673 7.91790543 0.708308385 1.052967192 0.339646798 0.230439037 0.339610077 22.92862291 0.067590154 0.087534521 7.86E-07 6.104832673 0.344658807 KGDSS(ph)AEELK ddPTM_A459_MK2206_30min_R1 1 KGDSSAEELK 10 1 P26373-2;P26373 P26373-2 RPL13 60S ribosomal protein L13 1 KGDS(0.192)S(0.808)AEELK 117.03 0.011046 7372100 2996.9 3225.3 2436 2768.4 1359.3 1669.5 2651.7 2668 630.56 2325.4 TRUE FALSE 2741.997918 3015.332384 2270.651107 2981.622648 1305.156203 1764.025647 2474.809931 2644.673957 696.1089685 2613.488108 1.04917176 1.153757836 0.868820141 1.140859466 0.49939244 0.674969839 0.946937514 1.011932654 0.266352453 1 11.35176088 -6.242924282 24.91236313 0.74162972 1.047171838 0.319060835 0.228677159 1033.211748 1390202.994 0.066853223 0.086143906 5.72E-07 6.242924282 0.305542118 KGDVEGSQS(ph)QDEGEGSGESER ddPTM_A459_MK2206_30min_R1 6 KGDVEGSQSQDEGEGSGESER 21 1 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 KGDVEGS(0.001)QS(0.994)QDEGEGS(0.004)GES(0.001)ER;KGDVEGS(0.001)QS(0.998)QDEGEGS(0.001)GES(0.001)ER;KGDVEGSQS(1)QDEGEGSGESER;KGDVEGS(0.002)QS(0.985)QDEGEGS(0.012)GES(0.001)ER;KGDVEGSQS(0.986)QDEGEGS(0.013)GES(0.001)ER;KGDVEGSQS(1)QDEGEGSGESER 176.22 2.50E-14 160990700 16144.38 17288.41 17287.84 13639.36 15931.82 13395.98 15588.62 16323.24 13936.04 14078.55 TRUE FALSE 14771.2157 16162.93137 16114.38959 14689.86587 15297.22187 14154.44881 14548.7316 16180.52763 15384.74123 15822.70706 0.93354542 1.021502282 1.018434426 0.928404085 0.966789173 0.89456556 0.919484355 1.022614371 0.972320423 1 13.94970883 -7.7726251 24.99992159 0.99810054 0.956841206 0.198945085 0.039960045 435.6716916 973704.5173 0.02360667 0.011501356 1.69E-08 7.7726251 -0.041259334 KGDVEGSQS(ph)QDEGEGSGESER ddPTM_A459_MK2206_30min_R2 3 KGDVEGSQSQDEGEGSGESER 21 1 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 KGDVEGS(0.113)QS(0.884)QDEGEGS(0.003)GESER;KGDVEGSQS(0.992)QDEGEGS(0.007)GES(0.001)ER;KGDVEGSQS(0.999)QDEGEGS(0.001)GESER 107.09 6.90E-05 38009700 38539 44502.3 39444 44681 43573 41632.9 48955 41749.9 40859.7 43630.7 TRUE FALSE 41489.57547 42292.38049 40759.04327 41030.41937 41862.10508 43217.26918 42527.14969 47206.75528 44413.60285 42207.03383 0.98300145 1.002022096 0.965693146 0.972122787 0.991827695 1.023935237 1.00758442 1.118457067 1.052279651 1 15.36519582 -7.166724406 1.577817833 1.06003359 0.98228079 0.466574538 0.031279932 0.30574013 1.500314255 0.016450597 0.010725689 6.81E-08 7.166724406 -0.077752799 KGDVEGSQSQDEGEGS(ph)GESER ddPTM_A459_MK2206_30min_R2 1 KGDVEGSQSQDEGEGSGESER 21 1 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 KGDVEGSQSQDEGEGS(0.712)GES(0.288)ER 75.191 0.018107 0 6849.4 7721.6 5936 6225.2 7368.9 7622.7 7801.2 7274.6 7860.4 7058.8 TRUE FALSE 7373.79533 7338.156572 6133.903277 5716.581247 7079.55996 7912.78719 6776.893069 8225.415197 8544.083384 6828.471934 1.079860238 1.074641097 0.898283443 0.837168447 1.036770749 1.158793251 0.9924465 1.204576262 1.251243831 1 12.73734706 -6.554574003 6.012723665 1.124252932 0.969910968 0.325461317 0.101229109 0.220876767 23.33571419 0.035532994 0.036057872 2.79E-07 6.554574003 -0.154341964 KGDVVHCWYTGTLQDGTVFDTNIQT(ph)SAK ddPTM_A459_MK2206_30min_R1 1 KGDVVHCWYTGTLQDGTVFDTNIQTSAK 28 1 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 1 KGDVVHCWYTGTLQDGTVFDT(0.104)NIQT(0.712)S(0.185)AK 96.307 6.95E-07 25096000 2128.7 2314.8 2360.1 1787.8 1616 1672.9 1814.4 1986 2073.8 1661.3 TRUE FALSE 1947.642887 2164.106099 2199.902988 1925.496666 1551.631298 1767.618152 1693.364687 1968.636611 2289.378931 1867.114386 1.043129923 1.159064552 1.178236858 1.031268721 0.83103173 0.946711227 0.906942124 1.054373865 1.226158905 1 10.8665946 -5.934471949 6.268657387 0.985079532 1.128034598 0.247585489 0.102581237 0.28817789 20.88792879 0.031176744 0.046513424 1.16E-06 5.934471949 0.142955066 KGDVVHCWYTGTLQDGTVFDTNIQTS(ph)AK ddPTM_A459_MK2206_30min_R1 1 KGDVVHCWYTGTLQDGTVFDTNIQTSAK 28 1 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 1 KGDVVHCWYTGTLQDGTVFDTNIQT(0.116)S(0.884)AK 125.85 2.50E-12 20798000 4255.7 4724.3 4560.4 3764.7 3524.2 2821.1 3487 3707.7 4088.1 3339.6 TRUE FALSE 3893.730367 4416.747211 4250.852754 4054.657846 3383.823651 2980.828244 3254.388592 3675.28397 4513.072624 3753.334861 1.037405537 1.176752775 1.132553559 1.080281402 0.901551228 0.794181269 0.86706588 0.979204922 1.202416729 1 11.87395729 -6.13327672 4.586759704 0.944212813 1.119381648 0.322072739 0.105714207 0.271816103 8.940331785 0.034153813 0.044919221 7.36E-07 6.13327672 0.175168835 KGEMPVSGLAVGSTLPS(ph)PR ddPTM_A459_MK2206_30min_R2 1 KGEMPVSGLAVGSTLPSPR 19 1 Q3T8J9-3 Q3T8J9-3 GON4L GON-4-like protein 1 KGEMPVSGLAVGS(0.104)T(0.104)LPS(0.793)PR 70.449 0.0081925 4944200 21098 27175 21425 24069 25750 18882 24419 17073 20619 24541 TRUE FALSE 22713.2791 25825.52902 22139.29881 22102.48571 24738.92562 19600.56774 21212.75597 19304.49972 22412.40335 23740.22918 0.9567422 1.087838235 0.932564662 0.931013999 1.042067683 0.825626728 0.893536276 0.813155575 0.944068534 1 14.53504624 -6.759857155 24.99982554 0.883490825 0.989005401 0.321943956 0.067685518 45.7830707 723393.955 0.022195439 0.021087556 1.74E-07 6.759857155 0.105514576 KGEQGGPPPKAS(ph)PSTAGETPSGVK ddPTM_A459_MK2206_30min_R1 1 KGEQGGPPPKASPSTAGETPSGVK 24 2 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 KGEQGGPPPKAS(0.607)PS(0.157)T(0.157)AGET(0.076)PS(0.003)GVK 42.384 0.035997 11103000 5064.5 5381.3 5213.9 4798 4556.1 4098.9 3786 4764.4 4132.3 3921.4 TRUE FALSE 4633.73768 5030.976392 4859.994995 5167.542791 4374.620889 4330.976176 3533.442848 4722.745353 4561.867373 4407.212637 1.05139871 1.141532485 1.102736672 1.172519508 0.992604907 0.982701887 0.80174095 1.07159462 1.035091281 1 12.10565079 -6.363600666 5.750003333 0.973623218 1.117346741 0.461520041 0.072131879 0.213886683 9.977007478 0.023383949 0.026566778 4.33E-07 6.363600666 0.143723523 KGESPSLES(ph)R ddPTM_A459_MK2206_30min_R1 1 KGESPSLESR 10 1 Q8NDX5-2;Q8NDX5;Q8NDX5-7;E7EX82;Q8NDX5-3 Q8NDX5-2 PHC3 Polyhomeotic-like protein 3 1 KGES(0.001)PS(0.008)LES(0.991)R 105.36 0.022553 12590000 7538.7 7562.2 6737.5 5599.3 5794.8 5682.1 7216.2 6459.1 5908.5 6440.7 TRUE FALSE 6897.493978 7069.899406 6280.177272 6030.559056 5563.980845 6003.815592 6734.820465 6402.62877 6522.709719 7238.622541 0.952873829 0.976691265 0.867592865 0.83310865 0.768651883 0.829414099 0.930400836 0.884509274 0.901098197 1 12.82149947 -10.10499031 12.02138342 0.999982823 0.880099752 0.260536615 0.059136126 0 0 0.064670503 0.015684901 7.85E-11 10.10499031 -0.119883071 KGESQTDIEITR ddPTM_A459_MK2206_30min_R2 1 KGESQTDIEITR 12 1 B4DUR8;P49368-2;P49368 B4DUR8 CCT3 T-complex protein 1 subunit gamma 0 118.76 0.0060119 4669300 17126 17369 17192 19736 15677 15840 19435 14438 12710 19094 FALSE TRUE 18437.17973 16506.48072 17765.1727 18123.50567 15061.44221 16442.8023 16883.16115 16325.09617 13815.49283 18470.96434 0.998170934 0.893644772 0.961789129 0.981188926 0.815411796 0.890197284 0.914037883 0.88382479 0.747957311 1 14.17297157 -6.248160405 24.84760408 0.872117356 0.954272515 0.275559518 0.066022934 993.9383692 1859855.95 0.018913708 0.024268417 5.65E-07 6.248160405 0.082155159 KGGEFDEFVNDDT(ph)DDDLPISK ddPTM_A459_MK2206_30min_R1 8 KGGEFDEFVNDDTDDDLPISK 21 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(0.999)DDDLPIS(0.001)K;KGGEFDEFVNDDT(0.988)DDDLPIS(0.012)K;KGGEFDEFVNDDT(0.999)DDDLPIS(0.001)K;KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(0.997)DDDLPIS(0.003)K;KGGEFDEFVNDDT(1)DDDLPISK 168.79 3.44E-10 76973500 60879 63680.9 62826.2 56671.08 56265.4 50957.1 58331.2 58228.69 55113.1 51731.07 TRUE FALSE 55700.92136 59535.26184 58561.73259 61035.8964 54024.22997 53842.24697 54440.03208 57719.6027 60842.30397 58139.9055 0.95804974 1.023999976 1.00725538 1.049810726 0.929210832 0.926080744 0.936362583 0.992770838 1.046480957 1 15.82724111 -3.781373432 18.02865486 0.985432122 0.992680364 0 0.044656929 0 0 0.011027096 0 0.000165435 3.781373432 0.007248241 KGGEFDEFVNDDT(ph)DDDLPISK ddPTM_A459_MK2206_30min_R2 3 KGGEFDEFVNDDTDDDLPISK 21 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(0.992)DDDLPIS(0.008)K;KGGEFDEFVNDDT(1)DDDLPISK 141.19 2.10E-05 28265200 335969 384870 377840 390540 399780 322225 416160 329875 309069 389320 TRUE FALSE 361691.045 365757.9155 390436.997 358631.6327 384082.6285 334487.4982 361517.6921 372990.7951 335951.263 376616.5203 0.960369568 0.971168007 1.036696417 0.952246153 1.019824165 0.888138146 0.959909278 0.990372899 0.892024765 1 18.52273676 -6.735555141 24.99610408 0.946351014 0.987834624 0.205261687 0.041291052 369.2890081 356617.1333 0.013094145 0.013090273 1.84E-07 6.735555141 0.041483609 KGLGGSDGEPASGS(ph)PK ddPTM_A459_MK2206_30min_R2 1 KGLGGSDGEPASGSPK 16 1 Q9H6A9-3;Q9H6A9 Q9H6A9-3 PCNXL3 Pecanex-like protein 3 1 KGLGGSDGEPAS(0.091)GS(0.909)PK 105.19 0.0019051 1937500 29029 17270 20005 16520 15560 11413 28458 17158 19887 27332 TRUE FALSE 31251.48256 16412.39691 20671.95672 15170.26316 14949.03622 11847.32971 24721.43042 19400.60951 21616.73531 26440.15908 1.181970292 0.62073745 0.781839347 0.573758392 0.565391311 0.448080879 0.934995525 0.7337554 0.81757206 1 14.69044324 -8.593873383 1.013328651 0.995606458 0.702849826 0.145921787 0.19814013 1.195588214 2.654260735 0.190218431 0.062569065 2.55E-09 8.593873383 -0.292756632 KGLPLGSAVSSPVLFS(ph)PVGR ddPTM_A459_MK2206_30min_R1 2 KGLPLGSAVSSPVLFSPVGR 20 1 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 KGLPLGSAVS(0.001)S(0.016)PVLFS(0.983)PVGR;KGLPLGSAVS(0.004)S(0.014)PVLFS(0.982)PVGR 119.29 0.00013099 33182000 12748.3 10410 11208.6 10498.4 12993 9724.6 11377.4 11735.6 8165.8 6578.6 TRUE FALSE 11663.99014 9732.307108 10447.79146 11306.98859 12475.4613 10275.19845 10618.43441 11632.99689 9014.664132 7393.606634 1.577577861 1.31631389 1.413084571 1.529292691 1.687330949 1.389741023 1.436164369 1.573385962 1.21925125 1 12.85206257 -8.493697801 3.661012895 1.001529138 1.483713773 0.705922199 0.102907842 0.110041054 3.534680845 0.102237133 0.026935588 3.21E-09 8.493697801 0.482184636 KGLPLGSAVSSPVLFS(ph)PVGR ddPTM_A459_MK2206_30min_R2 2 KGLPLGSAVSSPVLFSPVGR 20 1 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 KGLPLGSAVSS(0.004)PVLFS(0.996)PVGR;KGLPLGSAVSS(0.007)PVLFS(0.993)PVGR 105.58 0.00025303 16829300 63226 101260 85905 104124 108940 122115 100173 77131 102816 78897 TRUE FALSE 68066.63117 96231.57565 88769.02982 95616.73612 104662.4682 126762.1719 87020.16477 87212.28653 111758.7498 76322.59735 0.891828024 1.260852997 1.163076637 1.252797198 1.371316908 1.660873402 1.140162518 1.142679751 1.464294373 1 16.21982265 -4.229823676 1.266176595 1.298737556 3.09E-12 0.279352474 0.179919414 6.584772976 3.473668187 0.053213587 15.67475805 5.89E-05 4.229823676 -1.298737556 KGLVGPELHDR ddPTM_A459_MK2206_30min_R1 1 KGLVGPELHDR 11 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 91.961 0.017329 7866100 6190.1 6934.4 6588.4 5697.3 6813.1 5556 5970.8 6008.6 5418.3 5186.2 FALSE TRUE 5663.599489 6482.9693 6141.197764 6136.107033 6541.7198 5870.575919 5572.498826 5956.067444 5981.551675 5828.70561 0.971673622 1.112248539 1.053612616 1.052739226 1.12232805 1.007183466 0.956043966 1.021850792 1.026222986 1 12.50895982 -6.962268911 23.57277401 0.999816524 1.06429602 0.3405935 0.041943587 97.95229387 61195.71588 0.014335198 0.012642412 1.09E-07 6.962268911 0.064479495 KGLVGPELHDR ddPTM_A459_MK2206_30min_R2 1 KGLVGPELHDR 11 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 87.001 0.022046 7944100 82396 111760 103290 115690 125400 113480 126510 104580 126310 109570 FALSE TRUE 88704.30111 106210.1609 106733.637 106237.7569 120476.1659 117798.5609 109899.085 118248.9651 137296.2155 105994.7399 0.836874558 1.002032375 1.006971074 1.002292727 1.136624007 1.111362329 1.036835273 1.115611635 1.295311594 1 16.69363315 -3.394904282 0.455113259 1.128050473 4.25E-11 0.530200075 0.078174791 13.05128882 0.77959932 0.049877472 10.38805846 0.000402806 3.394904282 -1.128050473 KGNAEGS(ph)SDEEGKLVIDEPAK ddPTM_A459_MK2206_30min_R1 1 KGNAEGSSDEEGKLVIDEPAK 21 2 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 KGNAEGS(0.5)S(0.5)DEEGKLVIDEPAK 75.215 0.0034709 15095000 2338.8 2948 3125.2 2396.6 1360.6 1721.8 2534.8 2194.3 3813.2 4076.3 TRUE FALSE 2139.872778 2756.084664 2913.070131 2581.186547 1306.404421 1819.286828 2365.708117 2175.115466 4209.595786 4581.302818 0.467088264 0.601594082 0.635860638 0.56341758 0.285160024 0.397111237 0.516383267 0.474780985 0.918864339 1 12.16154221 -8.308743071 4.351974399 0.988051225 0.493104389 0.790538651 0.096325422 0.104806211 4.18943947 0.100437176 0.027480327 4.91E-09 8.308743071 -0.494946836 KGNAEGS(ph)SDEEGKLVIDEPAK ddPTM_A459_MK2206_30min_R2 2 KGNAEGSSDEEGKLVIDEPAK 21 2 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 KGNAEGS(0.5)S(0.5)DEEGKLVIDEPAK;KGNAEGS(0.5)S(0.5)DEEGKLVIDEPAK 91.926 0.00070886 31274000 139217 102511 124560 94458 88874 53170 125666 98874 60616 155810 TRUE FALSE 149875.5606 97420.4528 128712.7682 86740.47924 85384.3602 55193.42161 109165.9032 111797.1713 65888.27011 150725.9325 0.994358158 0.646341683 0.853952377 0.575484774 0.566487523 0.366183978 0.724267559 0.741724861 0.437139575 1 17.20156813 -1.522878745 0.898929934 0.622772838 176.015985 0.228975644 0.179637813 1274.818635 2.816810994 0.058095429 458667.6425 0.03 1.522878745 175.3932122 KGNPDS(ph)HAYWIR ddPTM_A459_MK2206_30min_R1 1 KGNPDSHAYWIR 12 1 Q96PE3-3;Q96PE3 Q96PE3-3 INPP4A "Type I inositol 3,4-bisphosphate 4-phosphatase" 1 KGNPDS(1)HAYWIR 76.927 0.024038 7123600 4810.8 5420.3 5079.7 4274 5328.1 4072.3 5361.6 4645.4 3022.7 3986.2 TRUE FALSE 4401.616197 5067.437485 4734.904117 4603.184221 5115.870495 4302.870107 5003.937447 4604.785758 3336.920482 4480.04055 0.982494723 1.1311142 1.056888674 1.027487178 1.141925042 0.960453384 1.116940213 1.02784466 0.74484158 1 12.12929608 -8.088750748 7.647757369 0.874108852 1.061224709 0.457831634 0.080371177 0.229309414 17.46389968 0.049527804 0.018590197 8.15E-09 8.088750748 0.187115857 KGNS(ph)PNSEPPTPK ddPTM_A459_MK2206_30min_R1 1 KGNSPNSEPPTPK 13 1 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 KGNS(0.828)PNS(0.172)EPPTPK 142.4 0.00039911 11686000 6977.2 8246.6 7875.9 7065 6601.2 6174.3 7219.3 6987.5 6547.9 6207 TRUE FALSE 6383.752501 7709.744841 7341.305852 7609.147524 6338.260226 6523.88353 6737.713669 6926.409024 7228.577637 6975.97002 0.915106069 1.105186063 1.052370614 1.090765514 0.908584786 0.935193745 0.965846133 0.992895469 1.03621111 1 12.76817812 -6.253299925 24.99681896 0.970506453 1.046274388 0.244784838 0.057864999 827.8473125 2542373.695 0.017291339 0.021959403 5.58E-07 6.253299925 0.075767935 KGNS(ph)PNSEPPTPK ddPTM_A459_MK2206_30min_R2 3 KGNSPNSEPPTPK 13 1 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 KGNS(0.992)PNS(0.008)EPPTPK;KGNS(1)PNSEPPTPK;KGNS(0.984)PNS(0.016)EPPTPK 125.39 0.0010953 32808800 103696 108567 100691 101306 108091 91528 127922 96455 86128 117532 TRUE FALSE 111635.0455 103175.7207 104047.9877 93028.97574 103846.8042 95011.16218 111125.6877 109061.9997 93619.25776 113696.9405 0.981864992 0.907462595 0.915134455 0.818218814 0.913364984 0.835652761 0.977385031 0.959234252 0.823410528 1 16.79483391 -7.276923841 24.72697841 0.936610299 0.894058025 0.114014029 0.0607259 1803.767865 2880408.291 0.025207739 0.017068607 5.29E-08 7.276923841 -0.042552275 KGNSPNS(ph)EPPTPK ddPTM_A459_MK2206_30min_R1 2 KGNSPNSEPPTPK 13 1 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 KGNS(0.332)PNS(0.668)EPPTPK;KGNS(0.107)PNS(0.893)EPPTPK 155.14 0.00065673 12428900 5884.8 6377.7 5957.4 5360.6 5475.5 5324 5236.8 5228.9 5040 4744.1 TRUE FALSE 5384.266858 5962.510571 5553.028286 5773.474341 5257.39924 5625.440279 4887.462627 5183.184279 5563.926036 5331.834924 1.00983375 1.118284916 1.041485411 1.082830662 0.986039387 1.055066475 0.916656779 0.972120171 1.043529313 1 12.3804164 -6.466157685 1.57502252 0.986911999 1.066339635 0.317955402 0.045545778 0.420042524 2.107318482 0.017378816 0.020004019 3.42E-07 6.466157685 0.079427635 KGPDEAEESQYDS(ph)GIESLR ddPTM_A459_MK2206_30min_R1 1 KGPDEAEESQYDSGIESLR 19 1 H3BNC2;Q7LC14;O00221 H3BNC2 NFKBIE NF-kappa-B inhibitor epsilon 1 KGPDEAEES(0.004)QY(0.005)DS(0.987)GIES(0.004)LR 66.711 0.011268 4707900 1282.2 1334.2 1369.2 1311.6 1365.2 1086.2 1273.9 1311.3 1236.8 1410 TRUE FALSE 1173.142157 1247.343337 1276.262519 1412.619659 1310.821193 1147.699705 1188.920455 1299.835442 1365.369786 1584.681445 0.740301567 0.787125603 0.805374811 0.891421846 0.827182774 0.72424632 0.750258331 0.820250307 0.861605208 1 10.62997714 -8.650920184 1.815449803 0.999361201 0.79322858 0.658163478 0.045647858 0.362818558 2.479443527 0.04854381 0.013694911 2.23E-09 8.650920184 -0.206132621 KGPGQPS(ph)SPQRLDR ddPTM_A459_MK2206_30min_R1 2 KGPGQPSSPQRLDR 14 2 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KGPGQPS(0.5)S(0.5)PQRLDR;KGPGQPS(0.644)S(0.356)PQRLDR 95.751 0.013879 83149000 8881.6 8081.5 9186.2 8506.8 9376.5 7592.7 7844.9 8666.3 5692.9 4415.4 TRUE FALSE 8126.173281 7555.392881 8562.666338 9161.99521 9003.01415 8022.592113 7321.581035 8590.531453 6284.697327 4962.413087 1.637544706 1.522523972 1.725504546 1.846278222 1.814241175 1.616671561 1.475407409 1.73111978 1.266459929 1 12.27682612 -8.45304541 2.898774444 1.001446748 1.671464452 0.796378129 0.112421617 0.110974075 1.950196897 0.118636034 0.031893544 3.52E-09 8.45304541 0.670017704 KGPGQPSS(ph)PQR ddPTM_A459_MK2206_30min_R1 4 KGPGQPSSPQR 11 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KGPGQPS(0.118)S(0.882)PQR;KGPGQPS(0.11)S(0.89)PQR;KGPGQPS(0.103)S(0.897)PQR;KGPGQPS(0.113)S(0.887)PQR 122.46 0.0074442 82249000 19259.3 18944 19572.2 15095.7 13983.2 15773.3 20179.6 16039.6 9039.19 20112.6 TRUE FALSE 17621.1954 17710.74216 18243.6936 16258.37343 13426.21953 16666.37061 18833.4557 15899.36747 9978.846148 22604.30073 0.779550565 0.783512057 0.807089492 0.719260181 0.59396748 0.737309719 0.833180196 0.703377984 0.441457856 1 14.46430967 -5.830644296 6.11921737 0.705705952 0.789196169 0.049717315 0.136639784 0.584821564 38.74768022 0.037873983 0.057201389 1.48E-06 5.830644296 0.083490217 KGPGQPSS(ph)PQRLDR ddPTM_A459_MK2206_30min_R1 1 KGPGQPSSPQRLDR 14 2 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KGPGQPS(0.209)S(0.791)PQRLDR 110.04 0.0049455 112850000 4894.3 4247.5 4503.4 4712.2 5032.5 4349.3 4318.5 4549.5 2965 2663.4 TRUE FALSE 4478.014084 3970.986978 4197.721755 5075.13446 4832.044869 4595.553607 4030.420745 4509.724201 3273.22236 2993.3621 1.49598142 1.3265976 1.402343457 1.695462925 1.614253374 1.535248144 1.346452788 1.506574898 1.093493621 1 11.54755109 -8.328472358 3.567276618 1.0037141 1.491435658 0.731090734 0.108061389 0.131392342 3.102779705 0.11215553 0.030520269 4.69E-09 8.328472358 0.487721558 KGS(ph)DSSIPDEEK ddPTM_A459_MK2206_30min_R1 1 KGSDSSIPDEEK 12 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 KGS(0.855)DS(0.048)S(0.097)IPDEEK 130.61 0.0038475 5369600 1932.3 2403.3 2548.4 1861.2 1471.7 1580.3 1675.8 1396.6 2140.3 2303.7 TRUE FALSE 1767.947738 2246.844733 2375.421708 2004.549946 1413.079073 1669.77522 1564.01044 1384.389673 2362.791844 2589.099748 0.682842652 0.867809259 0.91747014 0.77422662 0.545780082 0.644925025 0.604075004 0.534699242 0.912592049 1 11.33823483 -4.449134447 15.19213865 0.734604765 0.000125345 0.00298297 0.15986389 1993311.786 8738388.852 0.041350458 46592625.85 3.56E-05 4.449134447 -0.73447942 KGS(ph)GDYMPMSPK ddPTM_A459_MK2206_30min_R2 1 KGSGDYMPMSPK 12 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 KGS(0.997)GDYMPMS(0.003)PK 99.451 0.0073692 5691100 118050 132390 113660 114780 102780 76703 89260 76209 70127 83422 TRUE FALSE 127087.9988 125815.7051 117449.3677 105402.1068 98744.34077 79621.98641 77540.05478 86169.77796 76226.5197 80699.94697 1.574821342 1.559055611 1.455383455 1.306098836 1.223598583 0.986642363 0.960843937 1.067779859 0.94456716 1 16.30028011 -6.125818539 0.988295755 0.981112929 1.587860493 0.965185683 0.04459642 0.094652128 0.191949294 0.020119911 0.036998839 7.48E-07 6.125818539 0.606747564 KGS(ph)ITEYTAAEEK ddPTM_A459_MK2206_30min_R1 5 KGSITEYTAAEEK 13 1 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.974)IT(0.026)EYTAAEEK;KGS(0.892)IT(0.108)EYTAAEEK;KGS(0.697)IT(0.213)EYT(0.09)AAEEK;KGS(0.81)IT(0.187)EYT(0.003)AAEEK;KGS(0.996)IT(0.004)EYTAAEEK 189.04 0.00027489 240271000 23513.9 29109.6 29501.3 23931.3 17289.2 17260.5 21358.3 20278.8 25142.4 26488.4 TRUE FALSE 21513.91933 27214.55975 27498.83395 25774.49287 16600.53455 18237.77459 19933.52678 20101.50459 27756.04245 29769.98297 0.722671536 0.914161079 0.9237101 0.865787962 0.557626606 0.612622943 0.669584756 0.675227279 0.932349961 1 14.86157078 -6.114283655 24.91705676 0.714682822 0.865520511 0.123902067 0.139146081 32.27070268 6980.821902 0.040662196 0.052494673 7.69E-07 6.114283655 0.150837689 KGS(ph)ITEYTAAEEK ddPTM_A459_MK2206_30min_R2 2 KGSITEYTAAEEK 13 1 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.999)IT(0.001)EYTAAEEK;KGS(0.993)IT(0.007)EYTAAEEK 113.67 0.008059 96950000 133810 108502 136011 110981 118751 70371 133372 110361 76242 120516 TRUE FALSE 144054.5965 103113.9485 140545.5389 101913.4973 114088.2391 73049.01772 115860.0962 124785.5616 82873.39135 116583.5728 1.235633744 0.884463788 1.205534669 0.874166873 0.978596181 0.626580709 0.993794352 1.070352869 0.710849645 1 16.83100499 -5.781537371 24.94721285 0.893014371 1.086136052 0.283078134 0.155621067 314.8544226 390821.0421 0.042628387 0.063318518 1.65E-06 5.781537371 0.19312168 KGS(ph)PTPGFSTR ddPTM_A459_MK2206_30min_R1 1 KGSPTPGFSTR 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 KGS(0.964)PT(0.035)PGFSTR 129.76 0.0045311 144080000 5265.2 5961.1 5356.6 4473.5 4358 3546 5241.1 4663.2 4727.5 4745.6 TRUE FALSE 4817.367091 5573.031307 4993.008916 4818.049745 4184.411632 3746.771456 4891.475782 4622.430134 5218.940543 5333.520755 0.903224589 1.04490665 0.936156274 0.903352582 0.784549611 0.702494961 0.91711948 0.866675194 0.978516965 1 12.38087248 -5.769006292 2.949504954 0.861269967 0.975220695 0.148523792 0.088553467 0.394051301 7.024892132 0.026431296 0.046180639 1.70E-06 5.769006292 0.113950729 KGS(ph)QITQQSTNQSR ddPTM_A459_MK2206_30min_R1 2 KGSQITQQSTNQSR 14 1 P50750-2;P50750 P50750-2 CDK9 Cyclin-dependent kinase 9 1 KGS(0.973)QIT(0.007)QQS(0.02)T(0.001)NQSR;KGS(1)QITQQSTNQSR 139.58 0.0013536 1502300 1056.14 1091.65 878.21 976.38 806.04 641.74 1099.34 1083.14 965.67 1234.05 TRUE FALSE 966.309747 1020.583387 818.599552 1051.580957 773.93372 678.0747642 1026.005034 1073.670221 1066.054852 1386.933431 0.696723956 0.735856072 0.59022267 0.75820579 0.558017929 0.48890217 0.739765162 0.774132484 0.768641687 1 10.43768283 -8.546677715 0.978355352 0.993686793 0.647308342 0.609566889 0.084302147 0.430988949 0.905753143 0.085016724 0.028493812 2.84E-09 8.546677715 -0.346378451 KGS(ph)QITQQSTNQSR ddPTM_A459_MK2206_30min_R2 2 KGSQITQQSTNQSR 14 1 P50750-2;P50750 P50750-2 CDK9 Cyclin-dependent kinase 9 1 KGS(0.999)QIT(0.001)QQSTNQSR;KGS(0.999)QIT(0.001)QQSTNQSR 93.738 0.02524 10530300 17991.6 12689.6 13308.1 15119.2 14302.2 11676.3 13836.3 9517.5 12206.5 17613.5 TRUE FALSE 19369.05073 12059.45292 13751.78541 13883.913 13740.62377 12120.64978 12019.57719 10761.46993 13268.19931 17038.77294 1.13676324 0.70776534 0.807087779 0.814842304 0.806432706 0.711356963 0.705425046 0.631587144 0.778706269 1 14.05653382 -4.756435421 24.99977729 0.761448196 1.136763817 0.567044489 0.094633933 108.9200545 544102.7026 0.022790262 0.185055418 1.75E-05 4.756435421 0.375315621 KGS(ph)SGNASEVSVACLTER ddPTM_A459_MK2206_30min_R1 4 KGSSGNASEVSVACLTER 18 1 F8WAN1;Q69YQ0-2;Q69YQ0;A0A494C1J1;C9J8U1 F8WAN1 SPECC1L-ADORA2A;SPECC1L Cytospin-A 1 KGS(0.959)S(0.04)GNASEVSVACLTER;KGS(0.934)S(0.066)GNASEVSVACLTER;KGS(0.99)S(0.01)GNASEVSVACLTER;KGS(0.5)S(0.5)GNASEVSVACLTER 187.04 3.46E-10 79924600 6952.59 8585 8229.59 6457.42 6596.62 5092.72 5402.93 5360.69 5178.95 4849.75 TRUE FALSE 6361.235711 8026.11494 7670.98836 6954.771607 6333.862657 5381.065405 5042.510398 5313.822053 5717.320386 5450.573644 1.167076372 1.472526648 1.407372666 1.275970579 1.162054321 0.987247537 0.92513389 0.974910606 1.048939205 1 12.41219236 -6.443998006 1.904379868 0.979323411 1.356978199 0.804788071 0.079819601 0.138296023 0.998894834 0.029261915 0.03359869 3.60E-07 6.443998006 0.377654788 KGS(ph)SGNASEVSVACLTER ddPTM_A459_MK2206_30min_R2 5 KGSSGNASEVSVACLTER 18 1 F8WAN1;Q69YQ0-2;Q69YQ0;A0A494C1J1;C9J8U1 F8WAN1 SPECC1L-ADORA2A;SPECC1L Cytospin-A 1 KGS(0.753)S(0.247)GNASEVSVACLTER;KGS(0.911)S(0.089)GNASEVSVACLTER;KGS(0.758)S(0.242)GNASEVSVACLTER;KGS(0.94)S(0.059)GNASEVSVACLTER;KGS(0.842)S(0.158)GNASEVSVACLTER 109.77 0.0008602 200875000 131635 177640 159519 148461 155567 104292.5 154814 112240 115097 132427 TRUE FALSE 141713.0768 168818.6559 164837.2838 136331.2614 149458.6579 108261.4242 134486.7358 126910.1534 125107.929 128105.9178 1.106218036 1.317805288 1.286726536 1.064207366 1.166680357 0.845093076 1.049808925 0.990665814 0.976597577 1 16.9669776 -6.231223595 1.562429787 0.982270294 1.237709961 0.578373737 0.089244507 0.261760162 1.271949742 0.031547618 0.04401784 5.87E-07 6.231223595 0.255439667 KGS(ph)SSSVCSVASSSDISLGSTK ddPTM_A459_MK2206_30min_R2 1 KGSSSSVCSVASSSDISLGSTK 22 1 A0A087X2H1;Q9ULT8;H0YJP0 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 KGS(0.294)S(0.294)S(0.294)S(0.114)VCS(0.004)VASSSDISLGSTK 89.879 0.00022117 24668000 126170 148840 139780 122960 105800 67553 87150 53876 54809 62580 TRUE FALSE 135829.6722 141448.822 144440.1954 112913.7747 101645.7604 70123.77675 75707.10031 60917.77818 59576.18775 60538.01973 2.243708546 2.336528725 2.385941861 1.865171262 1.679040062 1.158342758 1.25057114 1.006273057 0.984111935 1 15.88555386 -6.401047661 1.055185271 1.022242606 2.362297721 0.96654474 0.101167667 0.080972903 0.191089285 0.046730604 0.061392673 3.97E-07 6.401047661 1.340055116 up KGSDDAPYS(ph)PTAR ddPTM_A459_MK2206_30min_R2 1 KGSDDAPYSPTAR 13 1 O75151;E7ET14;A0A087WW48 O75151 PHF2 Lysine-specific demethylase PHF2 1 KGSDDAPY(0.001)S(0.5)PT(0.5)AR 78.244 0.021299 14069000 35202 45880 46595 49860 47992 46741 58833 44723 37213 47951 TRUE FALSE 37897.09219 43601.66592 48148.45404 45786.27851 46107.59294 48519.76151 51108.15643 50568.44966 40449.71947 46386.3628 0.816987793 0.939967337 1.037987269 0.987063347 0.993990263 1.045991938 1.101792711 1.09015768 0.872017486 1 15.50141311 -4.83304343 2.05389526 1.022221365 0.770848131 0.500617179 0.060965712 0.516180314 2.670806895 0.016607265 0.23693356 1.47E-05 4.83304343 -0.251373234 KGSDDAPYSPT(ph)AR ddPTM_A459_MK2206_30min_R2 1 KGSDDAPYSPTAR 13 1 O75151;E7ET14;A0A087WW48 O75151 PHF2 Lysine-specific demethylase PHF2 1 KGSDDAPY(0.005)S(0.255)PT(0.74)AR 80.508 0.04609 14928000 41196 52742 43474 58971 51114 45573 75458 48197 41984 50810 TRUE FALSE 44349.99743 50122.90897 44923.40146 54152.88066 49107.00753 47307.31245 65550.27396 54496.51339 45635.69243 49152.07386 0.902301652 1.019751661 0.913967569 1.101741522 0.999083125 0.962468289 1.333621734 1.108732737 0.928459144 1 15.58496467 -5.869673693 0.919536417 1.083905425 0.936493595 0.143134248 0.113388002 1.302369179 2.131108389 0.050641264 0.136980318 1.35E-06 5.869673693 -0.147411829 KGSGDYMPMS(ph)PK ddPTM_A459_MK2206_30min_R1 2 KGSGDYMPMSPK 12 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 KGSGDYMPMS(1)PK;KGSGDYMPMS(1)PK 91.657 0.011673 37038000 23978.3 27338.3 26918.7 23433.1 17335 14833.6 18676.3 20613 23425.1 21155.5 TRUE FALSE 21938.81967 25558.5717 25091.53364 25237.92142 16644.51024 15673.46561 17430.4381 20432.78271 25860.22297 23776.40306 0.922713987 1.074955351 1.055312428 1.06146928 0.70004324 0.659202554 0.733098192 0.859372322 1.087642353 1 14.53724286 -6.245399266 24.35300451 0.818487451 1.033830089 0.328323449 0.130007033 657.4778272 998218.9006 0.040648854 0.052289429 5.68E-07 6.245399266 0.215342638 KGSGDYMPMS(ph)PK ddPTM_A459_MK2206_30min_R2 1 KGSGDYMPMSPK 12 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 KGS(0.001)GDYMPMS(0.999)PK 78.441 0.031329 5575400 93099 83291 87717 87839 73028 68464 94370 55891 64518 95519 TRUE FALSE 100226.731 79154.89006 90641.441 80662.27272 70160.55378 71069.4455 81979.10564 63196.1456 70129.65902 92402.22285 1.084678787 0.856634046 0.980944378 0.872947319 0.759295086 0.76913134 0.887198415 0.683924517 0.758960736 1 16.49563994 -5.97116339 3.527316224 0.796223894 0.961930026 0.360215846 0.096299369 0.241847102 6.384493319 0.027241719 0.04056351 1.07E-06 5.97116339 0.165706132 KGSIT(ph)EYTAAEEK ddPTM_A459_MK2206_30min_R1 1 KGSITEYTAAEEK 13 1 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.085)IT(0.915)EYTAAEEK 212.35 0.00059396 14626000 1235 1755.8 1334.7 1319.4 769.51 895.33 1044 1093.4 1379.6 1291.7 TRUE FALSE 1129.956765 1641.497101 1244.104283 1421.020417 738.8587872 946.0228109 974.3566649 1083.840519 1523.014357 1451.725548 0.77835426 1.13072137 0.856983115 0.978849218 0.508952114 0.651654035 0.671171398 0.746587756 1.049106258 1 10.50355302 -3.562929112 10.63116592 0.823946044 1.051276443 0 0.190052198 0 0 0.045723417 0 0.000273572 3.562929112 0.227330398 KGSIT(ph)EYTAAEEK ddPTM_A459_MK2206_30min_R2 1 KGSITEYTAAEEK 13 1 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.004)IT(0.995)EYT(0.001)AAEEK 190.18 0.02067 51198000 72787 69830 64624 49893 50701 38213 65618 49654 37793 65405 TRUE FALSE 78359.62868 66362.34374 66778.53191 45816.5823 48710.22399 39667.22249 57002.27778 56143.94829 41080.16683 63270.84021 1.238479344 1.048861427 1.05543931 0.724134248 0.769868455 0.626943192 0.900924938 0.887358981 0.649274874 1 15.94925313 -5.654865059 4.302513844 0.786052489 1.124080453 0.613137867 0.117250144 0.139963792 4.565323778 0.032014704 0.057199525 2.21E-06 5.654865059 0.338027964 KGTDVNVFNTILTTR ddPTM_A459_MK2206_30min_R2 2 KGTDVNVFNTILTTR 15 1 P04083 P04083 ANXA1 Annexin A1 0 ; 125.39 0.0016693 9392700 86034 108298 106274 121563 121736 120032 114011 99696 109379 105342 FALSE TRUE 92620.82919 102920.0788 109817.1221 111630.914 116956.033 124599.9019 99041.21875 112726.6095 118892.5877 101904.6992 0.908896547 1.009964012 1.07764532 1.095444223 1.147700095 1.22271007 0.971900408 1.106196382 1.166703682 1 16.63686105 -4.873230341 1.435328411 1.107339069 0.850423487 0.427690214 0.069665786 0.952027536 2.051858165 0.020356949 0.337323724 1.34E-05 4.873230341 -0.256915582 KGTENGVNGTLTSNVADS(ph)PR ddPTM_A459_MK2206_30min_R1 2 KGTENGVNGTLTSNVADSPR 20 1 G3XAN4;Q15629-2;Q15629 G3XAN4 TRAM1 Translocating chain-associated membrane protein 1 1 KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR 185.09 1.17E-14 27239000 18623.1 14760.5 10139.8 10946.2 18929.2 15347.8 16249.1 15518.1 18513.4 12927.6 TRUE FALSE 17039.10755 13799.58877 9451.538627 11789.27822 18175.20988 16216.77917 15165.15219 15382.42689 20437.93418 14529.16869 1.172751719 0.949785157 0.650521639 0.811421388 1.250946305 1.116153272 1.043772876 1.058727255 1.406682971 1 13.82666454 -6.256379953 24.99379235 1.142375074 0.882410459 0.358319261 0.163393167 490.1845276 2421533.276 0.05074423 0.063447003 5.54E-07 6.256379953 -0.259964615 KGTENGVNGTLTSNVADS(ph)PR ddPTM_A459_MK2206_30min_R2 1 KGTENGVNGTLTSNVADSPR 20 1 G3XAN4;Q15629-2;Q15629 G3XAN4 TRAM1 Translocating chain-associated membrane protein 1 1 KGTENGVNGTLTSNVADS(1)PR 213.71 5.54E-17 3000500 24362 10434 11320 12152 8597.6 13017 21981 10958 12232 10949 TRUE FALSE 26227.17345 9915.862732 11697.40315 11159.14273 8260.015025 13512.37106 19094.8683 12390.24822 13295.91725 10591.73503 2.476192369 0.936188708 1.104389708 1.053570798 0.779854764 1.275746705 1.802808345 1.169803455 1.2553106 1 13.37065132 -4.755274277 24.99999998 1.166224758 2.476194524 0.700951688 0.259138339 125.8290299 510198.1417 0.069884939 0.629891268 1.76E-05 4.755274277 1.309969766 KGVAINMVTEEDKR ddPTM_A459_MK2206_30min_R1 2 KGVAINMVTEEDKR 14 2 P60842 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 ; 137.95 0.00036965 33398000 4520.2 4305 4358.6 4012.4 3531.8 3684.1 4349.2 4004.4 3493.7 2986.3 FALSE TRUE 4135.733253 4024.743718 4062.750376 4321.435743 3391.120927 3892.690558 4059.072804 3969.389953 3856.882617 3356.265389 1.232242619 1.199173263 1.210497355 1.287572716 1.010385215 1.159827995 1.209401621 1.182680597 1.149159012 1 11.71264108 -14.52287875 0.155109976 0.347104332 1.2332757 0.434107102 0.065781892 138.4590446 1.249973204 27.89011897 0.316593921 3.00E-15 14.52287875 0.886171368 KGVAINMVTEEDKR ddPTM_A459_MK2206_30min_R2 1 KGVAINMVTEEDKR 14 2 P60842 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 77.74 0.025078 9405800 27269 26649 34704 33344 32393 29569 42907 30540 29630 30406 FALSE TRUE 29356.73561 25325.64941 35861.01404 30619.68854 31121.08806 30694.26901 37273.25936 34531.68286 32207.16384 29413.85471 0.998058088 0.861010896 1.219187842 1.040995437 1.058041809 1.043530993 1.267200771 1.173993793 1.094965762 1 14.84420824 -5.255143303 24.99679029 1.117054001 0.929534488 0.41680735 0.086296584 469.8583938 1865426.894 0.022346835 0.056162446 5.56E-06 5.255143303 -0.187519513 KGVEPSPS(ph)PIKPGDIK ddPTM_A459_MK2206_30min_R1 2 KGVEPSPSPIKPGDIK 16 2 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 KGVEPS(0.007)PS(0.993)PIKPGDIK;KGVEPS(0.008)PS(0.992)PIKPGDIK 86.189 0.017761 21783400 4475.4 4931.7 5264.4 4313.8 3032.8 3228.6 4477.1 4061.6 4665 5035.3 TRUE FALSE 4094.743729 4610.645434 4907.067195 4646.049623 2911.997154 3411.400542 4178.440828 4026.089859 5149.943444 5659.110979 0.723566607 0.814729637 0.8671092 0.820985777 0.514567953 0.602815629 0.738356403 0.711435042 0.910026939 1 12.46635971 -8.402640316 3.129302199 0.997622157 0.724124795 0.475991366 0.098809589 0.235467639 4.27250602 0.107025154 0.028734533 3.96E-09 8.402640316 -0.273497362 KGVNLPGAAVDLPAVSEK ddPTM_A459_MK2206_30min_R1 2 KGVNLPGAAVDLPAVSEK 18 1 P14618;P14618-3;B4DNK4;H3BQ34;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 145.48 0.00036333 24712000 15200 20839.3 15330.2 12907.9 14542 13652.4 15182.3 14061.4 14102.6 13450.4 FALSE TRUE 13907.16018 19482.65778 14289.62874 13902.06869 13962.76135 14425.38709 14169.51647 13938.46266 15568.61574 15116.7371 0.919984259 1.288813694 0.945285259 0.919647448 0.923662379 0.954265924 0.937339611 0.922054976 1.029892604 1 13.88385915 -5.403072589 19.31952122 0.948283932 1.107625578 0.310632109 0.089250718 3.369311976 531.8260836 0.021216675 0.044166126 3.95E-06 5.403072589 0.159341646 KGVNLPGAAVDLPAVSEK ddPTM_A459_MK2206_30min_R2 2 KGVNLPGAAVDLPAVSEK 18 1 P14618;P14618-3;B4DNK4;H3BQ34;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 173.87 3.66E-08 25448000 202113 228430 225520 235746 232986 204747 243043 185595 201502 225007 FALSE TRUE 217586.9267 217086.4984 233038.7242 216484.7977 223837.799 212538.7906 211131.1622 209852.9037 219028.2797 217665.04 0.999641131 0.997342055 1.070630011 0.994577713 1.028358982 0.976448908 0.96998196 0.964109366 1.006263016 1 17.73175018 -6.766892796 24.99776741 0.980281311 1.018566638 0.34510207 0.023741911 143.5481516 658002.585 0.008195117 0.007435769 1.71E-07 6.766892796 0.038285326 KGVSASAVPFTPS(ph)SPLLSCSQEGSR ddPTM_A459_MK2206_30min_R1 1 KGVSASAVPFTPSSPLLSCSQEGSR 25 1 J3QRU8;Q9Y2X7;Q9Y2X7-3;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 KGVSASAVPFT(0.001)PS(0.499)S(0.499)PLLSCSQEGSR 127.42 3.54E-08 34771000 3373.5 2998.4 3370.1 2644 3311.5 2910.7 3427.8 3589.2 2834.1 2696.1 TRUE FALSE 3086.56611 2803.203615 3141.347002 2847.641338 3179.595943 3075.501319 3199.137716 3557.820003 3128.714837 3030.113223 1.01863062 0.925115139 1.036709446 0.939780506 1.049332388 1.01497901 1.055781577 1.174154146 1.032540571 1 11.56515599 -6.817425608 1.37358619 1.078285082 0.981517812 0.279586195 0.054996854 0.455214591 1.791096323 0.025489444 0.021916777 1.52E-07 6.817425608 -0.09676727 KGVSASAVPFTPSS(ph)PLLSCSQEGSR ddPTM_A459_MK2206_30min_R1 1 KGVSASAVPFTPSSPLLSCSQEGSR 25 1 J3QRU8;Q9Y2X7;Q9Y2X7-3;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 KGVSASAVPFTPS(0.007)S(0.968)PLLS(0.023)CS(0.002)QEGSR 167.17 2.54E-16 34211000 6011.1 5235.4 5269.1 4172.7 5787.1 4708.4 5668.8 5868.3 4508.8 4540.9 TRUE FALSE 5499.824379 4894.574508 4911.448173 4494.082077 5556.587553 4974.985539 5290.644695 5816.994072 4977.505895 5103.460974 1.077665609 0.959069646 0.962375964 0.880594973 1.088788095 0.974825822 1.0366778 1.13981357 0.975319674 1 12.31726024 -6.282957424 24.88834717 1.039879599 0.968611706 0.197078357 0.064922334 1197.494449 1385050.738 0.020070385 0.022778284 5.21E-07 6.282957424 -0.071267893 KGVSASAVPFTPSS(ph)PLLSCSQEGSR ddPTM_A459_MK2206_30min_R2 2 KGVSASAVPFTPSSPLLSCSQEGSR 25 1 J3QRU8;Q9Y2X7;Q9Y2X7-3;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 KGVSASAVPFTPS(0.258)S(0.738)PLLS(0.003)CS(0.001)QEGSR;KGVSASAVPFTPS(0.267)S(0.704)PLLS(0.026)CS(0.003)QEGSR 157.73 3.50E-13 48013000 195731 210150 209628 260890 232800 248750 217410 177746 218520 224280 TRUE FALSE 210716.3159 199714.2566 216616.8929 239574.4525 223659.1023 258216.3556 188863.8058 200978.0125 237526.4746 216961.762 0.97121407 0.9205044 0.998410461 1.104224313 1.030868759 1.190146841 0.870493511 0.926329187 1.094784963 1 17.72708127 -5.514595637 23.75580395 1.029654452 0.949258752 0.133895992 0.085882757 414.6044827 1189072.85 0.024076739 0.044485161 3.06E-06 5.514595637 -0.080395699 KGVY(ph)LS(ph)HT(ph)GGK ddPTM_A459_MK2206_30min_R2 1 KGVYLSHTGGK 11 1 Q9BPW9-4 Q9BPW9-4 3 KGVY(1)LS(1)HT(1)GGK 74.92 0.047157 0 13185 15363 11941 12447 16377 9446.3 13547 8485.4 9858.1 12534 TRUE FALSE 14194.45374 14600.09576 12339.10698 11430.04028 15733.95669 9805.785566 11768.26263 9594.470915 10715.53972 12125.01661 1.170674994 1.20412996 1.017656914 0.942682444 1.297644135 0.808723475 0.970577032 0.791295487 0.883754643 1 13.5656991 -6.779165682 24.9969724 0.882807752 1.114601966 0.536828764 0.109050458 198.6018841 280059.1635 0.038350323 0.033893142 1.66E-07 6.779165682 0.231794214 KHEAFESDLAAHQDR ddPTM_A459_MK2206_30min_R1 1 KHEAFESDLAAHQDR 15 1 O43707;O43707-2;P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;H7C5W8;F6THM6;A0A494C060 O43707;P12814-4 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 0 64.842 0.022349 11631000 2652.7 2952.5 2598.3 2343.6 2654.1 2439.6 3359.8 2237.9 2573.7 2554.3 FALSE TRUE 2427.073935 2760.291713 2421.934635 2524.104478 2548.381577 2577.728044 3135.673872 2218.334276 2841.245325 2870.745968 0.845450612 0.961524198 0.84366038 0.879250378 0.8877071 0.897929692 1.092285388 0.772737923 0.989723701 1 11.48720996 -7.026502472 24.94283755 0.951942424 0.886142455 0.178854937 0.080461335 1493.271661 1405390.112 0.029466229 0.022902211 9.41E-08 7.026502472 -0.065799968 KHEAFESDLAAHQDR ddPTM_A459_MK2206_30min_R2 4 KHEAFESDLAAHQDR 15 1 O43707;O43707-2;P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;H7C5W8;F6THM6;A0A494C060 O43707;P12814-4 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 0 ;;; 145.1 0.00024929 46291000 279687 382409 286776 420188 412190 383195 410876 319756 272347 393104 FALSE TRUE 301100.0518 363419.1251 296336.9687 385857.2963 396005.3495 397777.7542 356927.4876 361549.2071 296035.2498 380277.0487 0.791791282 0.955669364 0.779265984 1.014674164 1.041360111 1.046020936 0.938598553 0.950752112 0.778472566 1 18.53669134 -5.770548706 24.9998686 0.970265296 0.853584918 0.310908639 0.084605384 250.603943 687764.8602 0.024502137 0.036931004 1.70E-06 5.770548706 -0.116680378 KHLEINPDHPIVETLR ddPTM_A459_MK2206_30min_R1 1 KHLEINPDHPIVETLR 16 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 78.228 0.0087591 14516000 5764.2 5439.5 5203 5958.7 6591 5192.3 5562.3 5287.6 4074.9 3110 FALSE TRUE 5273.924521 5085.387561 4849.834856 6417.640106 6328.466513 5486.283539 5191.249116 5241.371071 4498.500437 3495.290279 1.508865959 1.454925673 1.387534216 1.836082154 1.810569654 1.56962172 1.485212586 1.499552441 1.287017695 1 11.77119656 -8.501321452 1.156699281 1.000750656 1.592244287 0.651511926 0.13487576 0.352741076 1.03555406 0.14436883 0.045787304 3.15E-09 8.501321452 0.59149363 KHLEINPDHSIIETLR ddPTM_A459_MK2206_30min_R1 1 KHLEINPDHSIIETLR 16 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 73.802 0.011131 12081000 4343.5 4834.2 4056.7 5321 5203.1 4761 4683.2 4645 4284.7 4089 FALSE TRUE 3974.062516 4519.492701 3781.342507 5730.824342 4995.849509 5030.563706 4370.792273 4604.389255 4730.109898 4595.57619 0.86475827 0.983444189 0.822822286 1.247030645 1.087099702 1.094653531 0.951086891 1.001917728 1.029274611 1 12.16603004 -5.729947678 24.99999707 1.05699804 0.899651853 0.455468865 0.084170355 200.5476992 159205.3793 0.02366485 0.040983914 1.86E-06 5.729947678 -0.157346187 KHS(ph)EEAEFTPPLK ddPTM_A459_MK2206_30min_R2 1 KHSEEAEFTPPLK 13 1 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 KHS(1)EEAEFTPPLK 86.772 0.01336 9903300 54008 68295 68114 63918 56327 40785 68021 54483 38206 65834 TRUE FALSE 58142.89401 64903.56961 70384.88676 58695.69494 54115.31896 42337.10175 59089.76099 61604.11517 41529.08882 63685.84197 0.912964204 1.019120853 1.105188918 0.921644327 0.84972291 0.664780435 0.927831982 0.967312565 0.652092954 1 15.95868506 -6.03377906 3.970172426 0.83888327 1.01411517 0.295904349 0.116119899 0.26862751 9.205560291 0.03445938 0.048130559 9.25E-07 6.03377906 0.1752319 KHS(ph)PSPPPPTPTESR ddPTM_A459_MK2206_30min_R1 2 KHSPSPPPPTPTESR 15 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 KHS(0.5)PS(0.5)PPPPTPTESR;KHS(0.889)PS(0.111)PPPPTPTESR 88.486 0.0090236 2283160 924.39 1121.78 1104.33 830.06 805.16 1054.86 877.97 1009.74 1004.04 729.21 TRUE FALSE 845.7657763 1048.751918 1029.371156 893.991365 773.0887722 1114.585262 819.4022232 1000.91195 1108.413551 819.5500401 1.031987963 1.279667948 1.256019896 1.090831946 0.943308809 1.359996592 0.999819637 1.221294492 1.352465984 1 9.67868823 KHSEEAEFTPPLKCS(ph)PK ddPTM_A459_MK2206_30min_R2 2 KHSEEAEFTPPLKCSPK 17 2 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 KHSEEAEFT(0.003)PPLKCS(0.997)PK;KHSEEAEFT(0.006)PPLKCS(0.994)PK 62.104 0.021042 20512800 68822 73111 63278 64907 79129 45016 96943 66822 55047 86879 TRUE FALSE 74091.06524 69480.41405 65387.65694 59603.89047 76021.99787 46729.11542 84214.26765 75555.86483 59834.88856 84044.14535 0.881573189 0.826713316 0.778015609 0.709197413 0.904548408 0.556006789 1.002024202 0.89900212 0.711945946 1 16.3588597 -10.57488926 4.999658507 1.000003491 0.808311436 0.187337918 0.120167497 4.53E-06 8.59E-07 0.112729253 0.027340362 2.66E-11 10.57488926 -0.191692055 KHSPS(ph)PPPPTPTESR ddPTM_A459_MK2206_30min_R2 1 KHSPSPPPPTPTESR 15 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 KHS(0.368)PS(0.632)PPPPTPTESR 70.615 0.026292 7586300 16993 19284 13362 17894 25398 14724 17974 25480 21124 19156 TRUE FALSE 18293.99715 18326.3846 13807.48241 16432.00296 24400.74691 15284.33214 15613.99221 28810.32349 22961.32734 18530.94129 0.987213594 0.988961344 0.745104212 0.886733313 1.316757013 0.824800635 0.842590345 1.55471452 1.239080464 1 14.17764855 -7.745016734 24.99929344 1.297673215 0.94380143 0.369246892 0.191904948 224.7725973 342159.9655 0.090458743 0.052035695 1.80E-08 7.745016734 -0.353871785 KIAELEEEQS(ph)QGSTTNSDWMK ddPTM_A459_MK2206_30min_R2 1 KIAELEEEQSQGSTTNSDWMK 21 1 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KIAELEEEQS(0.245)QGS(0.185)T(0.185)T(0.185)NS(0.2)DWMK 66.325 0.0048181 9530500 4699.3 8860 6549.3 9078.8 9331.5 8225.2 10172 5357.8 9134.5 6402.8 TRUE FALSE 5059.082021 8420.025284 6767.650393 8337.032998 8965.098423 8538.21575 8836.404181 6058.082856 9929.002299 6193.87716 0.816787594 1.359411087 1.092635552 1.346012002 1.447413016 1.37849291 1.426635361 0.978076042 1.603035069 1 12.59662706 -4.757050515 24.97721717 1.298887452 0.81678687 0.349703845 0.194396392 141.0414664 802569.6093 0.045369198 0.348500911 1.75E-05 4.757050515 -0.482100582 KIAELEEEQSQGS(ph)TTNSDWMK ddPTM_A459_MK2206_30min_R1 1 KIAELEEEQSQGSTTNSDWMK 21 1 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KIAELEEEQS(0.002)QGS(0.333)T(0.216)T(0.216)NS(0.234)DWMK 97.095 0.0002628 3304600 954.61 912.07 1022.3 1100.2 918.34 625.09 745.79 776.18 622.16 481.05 TRUE FALSE 873.4154066 852.6940772 952.9091243 1184.937595 881.7605732 660.4820556 696.0397099 769.3939401 686.8357584 540.6461057 1.615503002 1.577176027 1.762537664 2.191706519 1.630938545 1.221653219 1.287422035 1.423100864 1.27039805 1 9.078540738 -6.648184706 4.578656389 1.27100498 1.784849778 0.664050131 0.184666593 0.146726357 5.220571267 0.065946698 0.06551557 2.25E-07 6.648184706 0.513844798 KIAELEEEQSQGST(ph)TNSDWMK ddPTM_A459_MK2206_30min_R2 1 KIAELEEEQSQGSTTNSDWMK 21 1 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KIAELEEEQSQGS(0.036)T(0.354)T(0.354)NS(0.256)DWMK 100.92 0.00038561 9326200 23932 33665 38593 34621 41507 28662 41316 35598 41309 37876 TRUE FALSE 25764.25232 31993.24505 39879.67136 31792.35355 39877.22662 29752.75249 35891.15957 40250.78083 44901.98215 36640.10922 0.703170729 0.873175483 1.088415734 0.867692652 1.088349011 0.812026851 0.979559295 1.098544237 1.225487126 1 15.16113618 -7.698991866 3.473178653 1.125985631 0.917624025 0.353888557 0.121020871 0.262235439 6.333332529 0.065813803 0.033429865 2.00E-08 7.698991866 -0.208361606 KIAELEEEQSQGSTTNS(ph)DWMK ddPTM_A459_MK2206_30min_R1 4 KIAELEEEQSQGSTTNSDWMK 21 1 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KIAELEEEQS(0.002)QGS(0.007)T(0.033)T(0.16)NS(0.799)DWMK;KIAELEEEQS(0.001)QGS(0.098)T(0.019)T(0.059)NS(0.823)DWMK;KIAELEEEQSQGS(0.001)T(0.029)T(0.029)NS(0.941)DWMK;KIAELEEEQSQGS(0.005)T(0.023)T(0.073)NS(0.899)DWMK 151.47 7.46E-07 65289000 8306.2 9359.4 9788.6 10458.7 8594.7 6633.63 7465.5 9890.9 6505.37 4666.02 TRUE FALSE 7599.714072 8750.101359 9124.177105 11264.23089 8252.354899 7009.220398 6967.490117 9804.424904 7181.626491 5244.081784 1.449198236 1.668566914 1.739899849 2.147989171 1.573651068 1.336596317 1.328638721 1.869617086 1.369472633 1 12.35647447 -6.517782512 24.52665367 1.434526469 1.759191839 0.306459965 0.256709191 249.5833673 1201179.314 0.084447018 0.086833844 3.04E-07 6.517782512 0.32466537 KIAELEEEQSQGSTTNS(ph)DWMK ddPTM_A459_MK2206_30min_R2 1 KIAELEEEQSQGSTTNSDWMK 21 1 P46821;D6RA32;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KIAELEEEQS(0.001)QGS(0.024)T(0.093)T(0.065)NS(0.817)DWMK 97.94 0.00017665 9023400 44606 74178 66549 58522 80548 61755 79586 57493 71877 65171 TRUE FALSE 48021.06966 70494.42838 68767.71045 53740.5654 77385.2808 64105.1298 69136.2626 65007.5325 78128.73154 63044.47561 0.761701469 1.118169795 1.09078091 0.852423069 1.227471242 1.016823904 1.096626817 1.031137651 1.239263723 1 15.94408234 -4.75635127 24.99969921 1.07291735 0.761700988 0.437592557 0.106448936 147.1286863 722814.7764 0.025100573 0.204619297 1.75E-05 4.75635127 -0.311216361 KIALESEGRPEEQMESDNCS(ph)GGDDDWTHLSSK ddPTM_A459_MK2206_30min_R2 2 KIALESEGRPEEQMESDNCSGGDDDWTHLSSK 32 2 Q13501;Q13501-2 Q13501 SQSTM1 Sequestosome-1 1 KIALES(0.005)EGRPEEQMES(0.152)DNCS(0.831)GGDDDWT(0.012)HLSSK;KIALES(0.001)EGRPEEQMES(0.049)DNCS(0.881)GGDDDWT(0.067)HLS(0.001)S(0.001)K 53.722 0.00096931 20306600 32204 78286 50507 96106 113714 112030 90716 60588 95864 58121 TRUE FALSE 34669.563 74398.43108 52190.87817 88253.83237 109249.017 116293.3802 78804.88023 68507.05963 104202.0774 56224.51653 0.616627143 1.323238254 0.928258372 1.569668142 1.943085041 2.068374925 1.401610633 1.218455291 1.853321004 1 15.77891173 -5.784355358 7.596489513 1.617843838 0.992161998 0.398657745 0.347699808 0.173914104 41.8286376 0.098707142 0.151271464 1.64E-06 5.784355358 -0.62568184 KICTLPSPPS(ph)PLASLAPVADSSTR ddPTM_A459_MK2206_30min_R1 2 KICTLPSPPSPLASLAPVADSSTR 24 1 Q9UER7-3;Q9UER7;Q9UER7-2 Q9UER7-3 DAXX Death domain-associated protein 6 1 KICTLPS(0.001)PPS(0.988)PLAS(0.009)LAPVADS(0.001)S(0.001)T(0.001)R;KICTLPSPPS(0.999)PLASLAPVADSSTR 88.842 3.64E-05 71220000 9948.7 11390.1 11781.2 9314.5 9377.9 8923.2 9979.6 9497.3 8586.5 7944.7 TRUE FALSE 9102.510822 10648.60242 10981.52497 10031.9044 9004.358385 9428.423873 9313.879093 9414.266107 9479.097402 8928.949415 1.019438055 1.192592983 1.22987873 1.123525729 1.008445447 1.055938771 1.043110299 1.054353168 1.061613966 1 13.12427472 -6.107705129 5.121905845 1.041731215 1.15547309 0.471396928 0.053991244 0.195398492 7.642140866 0.016166323 0.021230235 7.80E-07 6.107705129 0.113741875 KICTLPSPPS(ph)PLASLAPVADSSTR ddPTM_A459_MK2206_30min_R2 2 KICTLPSPPSPLASLAPVADSSTR 24 1 Q9UER7-3;Q9UER7;Q9UER7-2 Q9UER7-3 DAXX Death domain-associated protein 6 1 KICTLPSPPS(0.979)PLAS(0.014)LAPVADS(0.004)S(0.002)T(0.002)R;KICTLPSPPS(0.997)PLAS(0.003)LAPVADSSTR 95.152 6.05E-06 52832000 48168 72430 54798 68451 75627 80298 68498 60148 65355 60642 TRUE FALSE 51855.77911 68833.23152 56624.93797 62858.33434 72657.50398 83353.79666 59504.13032 68009.55012 71039.45977 58663.25651 0.883956708 1.173361924 0.965253914 1.071511165 1.238552176 1.420885945 1.01433391 1.159321084 1.210970273 1 15.84016954 -4.757599713 24.90439662 1.144763427 0.883956315 0.260374892 0.128845257 156.2231518 1013124.058 0.033258339 0.244073787 1.75E-05 4.757599713 -0.260807112 KIDAGTMAEPS(ph)ASPSK ddPTM_A459_MK2206_30min_R1 1 KIDAGTMAEPSASPSK 16 1 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 KIDAGTMAEPS(0.632)AS(0.364)PS(0.004)K 125.04 0.00063558 16792000 7019.1 7891.3 7460.8 6740 6476.3 5775 6331.7 6019.8 6797.2 5560.6 TRUE FALSE 6422.088686 7377.574936 6954.381683 7259.115968 6218.335257 6101.975509 5909.323846 5967.169523 7503.793264 6249.489108 1.02761819 1.180508488 1.112792032 1.161553503 0.995014976 0.976395895 0.945569109 0.954825174 1.200705071 1 12.60952254 -6.269687918 24.66108647 1.004716037 1.12433694 0.319704494 0.077036135 575.6404515 1721019.915 0.023577737 0.027217415 5.37E-07 6.269687918 0.119620903 KIDAGTMAEPSAS(ph)PSK ddPTM_A459_MK2206_30min_R2 4 KIDAGTMAEPSASPSK 16 1 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 KIDAGTMAEPS(0.082)AS(0.893)PS(0.025)K;KIDAGTMAEPS(0.332)AS(0.477)PS(0.191)K;KIDAGTMAEPS(0.35)AS(0.633)PS(0.017)K;KIDAGTMAEPS(0.339)AS(0.592)PS(0.069)K 137.87 0.00020851 57494000 453111 453056 463199 438542 499305 329842 572300 430648 419705 542530 TRUE FALSE 487801.5265 430557.8978 478641.8235 402711.7158 479699.7769 342394.3684 497156.3225 486935.1722 456210.1822 524827.2905 0.929451527 0.820380162 0.911998732 0.767322361 0.914014544 0.652394368 0.94727605 0.927800785 0.869257736 1 19.00148322 -8.475105682 0.852818347 0.992124013 0.842714398 0.207105102 0.086169546 0.967974034 1.573905677 0.080167491 0.028831963 3.35E-09 8.475105682 -0.149409615 KIDAGTMAEPSASPS(ph)K ddPTM_A459_MK2206_30min_R1 1 KIDAGTMAEPSASPSK 16 1 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 KIDAGTMAEPS(0.017)AS(0.318)PS(0.666)K 133.23 0.00028381 17132000 7192.5 7992.2 7429.3 7331.9 5675.4 5232.3 5774.9 6941 6266.2 6145.7 TRUE FALSE 6580.740106 7471.906327 6925.019815 7896.604208 5449.3368 5528.548304 5389.666958 6880.315569 6917.593914 6907.075714 0.952753434 1.081775651 1.00259793 1.143263015 0.788949915 0.800418083 0.780310971 0.996125691 1.001522815 1 12.75385932 -6.262215358 24.99927243 0.88394186 1.04468169 0.379209497 0.093773739 76.59045146 2467460.084 0.030106407 0.036160016 5.47E-07 6.262215358 0.16073983 KIDAGTMAEPSASPS(ph)K ddPTM_A459_MK2206_30min_R2 1 KIDAGTMAEPSASPSK 16 1 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 KIDAGTMAEPS(0.194)AS(0.321)PS(0.485)K 94.707 0.006479 7105300 77121 89767 82191 79381 86657 71901 109200 71432 72122 78990 TRUE FALSE 83025.44306 85309.30131 84931.20692 72895.31837 83254.41076 74637.24294 94861.90883 80768.40766 78395.04119 76412.56277 1.086541794 1.116430312 1.111482246 0.953970339 1.089538261 0.97676665 1.241443886 1.057004303 1.025944404 1 16.22152223 KIDTHPS(ph)PSHSSTVK ddPTM_A459_MK2206_30min_R2 1 KIDTHPSPSHSSTVK 15 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H0Y594;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 KIDT(0.249)HPS(0.663)PS(0.087)HSSTVK 69.729 0.036945 24688000 31779 100900 62436 180770 182740 242570 175300 106470 152050 146460 TRUE FALSE 34212.02467 95889.45272 64517.58508 166000.5127 175564.7094 251801.1713 152282.8994 120385.9946 165275.0342 141681.0222 0.241472176 0.676798143 0.455372103 1.171649598 1.239154734 1.77723994 1.074829198 0.849697389 1.166529092 1 17.112287 -5.769172416 8.59221183 1.19977963 0.478856364 0.642913883 0.24718382 0.084871051 52.7717036 0.073776251 0.115762439 1.70E-06 5.769172416 -0.720923266 KIDTHPSPS(ph)HSSTVK ddPTM_A459_MK2206_30min_R1 1 KIDTHPSPSHSSTVK 15 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H0Y594;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 KIDTHPS(0.034)PS(0.866)HS(0.066)S(0.017)T(0.017)VK 78.508 0.022577 14261000 6703.5 2897.5 3338.4 2509.6 9434.4 8634.5 7165 5135.6 3045.1 2346.3 TRUE FALSE 6133.332124 2708.872223 3111.798709 2702.889827 9058.60787 9123.377928 6687.035923 5090.699991 3361.649042 2636.977358 2.325894876 1.027264119 1.180062734 1.024995463 3.435223986 3.459786221 2.535871574 1.930505765 1.274811493 1 11.36466947 -6.231941999 24.97308703 2.391738286 1.348712668 0.206536448 0.826983109 1020.313482 863818.254 0.256321311 0.330862168 5.86E-07 6.231941999 -1.043025618 KIDTHPSPS(ph)HSSTVK ddPTM_A459_MK2206_30min_R2 1 KIDTHPSPSHSSTVK 15 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H0Y594;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 KIDTHPS(0.163)PS(0.811)HS(0.016)S(0.004)T(0.005)VK 69.045 0.03829 25928000 25841 48774 29907 65935 65120 90504 63595 40559 58711 55950 TRUE FALSE 27819.40683 46351.95408 30904.08445 60547.89958 62563.0616 93948.19314 55244.90011 45860.20056 63817.57665 54124.35608 0.513990537 0.856397331 0.570982949 1.1186812 1.155913273 1.735784034 1.020703138 0.847311707 1.179091656 1 15.72399034 -5.804252764 6.949994112 1.165875705 0.668248548 0.493172417 0.233577641 0.175114229 21.64901013 0.069824743 0.105636728 1.57E-06 5.804252764 -0.497627156 KIEEAMDGSET(ph)PQLFTVLPEK ddPTM_A459_MK2206_30min_R1 2 KIEEAMDGSETPQLFTVLPEK 21 1 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 KIEEAMDGS(0.006)ET(0.957)PQLFT(0.037)VLPEK;KIEEAMDGS(0.003)ET(0.996)PQLFT(0.002)VLPEK 117.51 9.46E-05 31190000 14300 15287.5 13924.2 11298.9 12485.6 12152.9 14676.6 12468.7 15433.4 17296.7 TRUE FALSE 13083.70991 14292.28097 12979.0641 12169.14324 11988.27211 12840.9867 13697.55079 12359.68747 17037.75716 19439.54578 0.673046071 0.735216817 0.66766293 0.625999361 0.616695074 0.660560017 0.704622986 0.635801248 0.876448316 1 14.24670689 -8.435652139 3.168529309 0.998015069 0.665459157 0.91128668 0.035042011 0.064719717 1.268855339 0.036500254 0.009747746 3.67E-09 8.435652139 -0.332555912 KIEEAMDGSET(ph)PQLFTVLPEK ddPTM_A459_MK2206_30min_R2 1 KIEEAMDGSETPQLFTVLPEK 21 1 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 KIEEAMDGS(0.006)ET(0.993)PQLFT(0.001)VLPEK 86.258 0.0074309 0 22654 18781 24776 27761 19945 14956 18778 15533 16615 22501 TRUE FALSE 24388.40766 17848.36285 25602.01947 25492.8375 19161.85908 15525.16106 16312.42604 17563.21643 18060.14267 21766.79421 1.120440953 0.819981237 1.176196146 1.171180159 0.880325274 0.713249774 0.749417938 0.806881172 0.829710728 1 14.40984132 -6.451828194 5.615303802 0.802413498 1.059789391 0.506000148 0.117445624 0.182674439 10.61479301 0.037263769 0.041892105 3.53E-07 6.451828194 0.257375893 KIEEAMDGSET(ph)PQLFTVLPEKR ddPTM_A459_MK2206_30min_R1 1 KIEEAMDGSETPQLFTVLPEKR 22 2 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 KIEEAMDGS(0.021)ET(0.969)PQLFT(0.01)VLPEKR 77.51 0.0050575 12132000 1531.4 1516.8 1156.8 1254.4 1534 1274.2 1195.7 1162.4 966.76 985.6 TRUE FALSE 1401.146388 1418.056044 1078.279639 1351.014105 1472.897532 1346.344103 1115.937035 1152.237259 1067.258162 1107.703569 1.264910963 1.28017647 0.973437 1.219653112 1.329685642 1.215437181 1.007432914 1.040203617 0.963487156 1 10.11335614 -7.262376861 23.67129554 1.006131199 1.211493344 0.567919464 0.090173124 33.67932633 850368.1704 0.038663368 0.027771944 5.47E-08 7.262376861 0.205362145 KIEFPLPDRR ddPTM_A459_MK2206_30min_R1 1 KIEFPLPDRR 10 2 P43686;P43686-2 P43686 PSMC4 26S protease regulatory subunit 6B 0 172.98 8.11E-05 5878300 3996.9 4455.9 4270.1 3566.2 3966.8 4742.4 4202.1 4041.7 3520.9 3285.7 FALSE TRUE 3656.942666 4165.8201 3980.257509 3840.869342 3808.793956 5010.91059 3921.785576 4006.363843 3886.910155 3692.757322 0.990301379 1.128105569 1.077855153 1.040108788 1.031422762 1.356956375 1.062020933 1.084924758 1.052576656 1 11.85048274 -4.751556789 24.56494599 1.098600054 0.990301104 0.092554294 0.094524127 807.8599497 2007906.563 0.023688558 0.302087365 1.77E-05 4.751556789 -0.10829895 KIEPELDGSAQVTSHDASTNGLINFIK ddPTM_A459_MK2206_30min_R1 1 KIEPELDGSAQVTSHDASTNGLINFIK 27 1 P06744-2;P06744;A0A2U3TZU2;K7EQ48 P06744-2 GPI Glucose-6-phosphate isomerase 0 43.436 0.045562 10428000 1652.9 1705.8 2130.5 1785.8 2013.6 1940.2 1945.2 2212.3 1805.1 1272.4 FALSE TRUE 1512.312175 1594.75211 1985.887596 1923.342625 1933.394048 2050.052447 1815.439257 2192.958094 1992.746605 1430.034518 1.057535434 1.115184347 1.388699063 1.344962378 1.351991175 1.433568506 1.269507298 1.533500112 1.393495457 1 10.48183426 -5.200965881 4.635190191 1.360255381 1.074281662 0.360845701 0.132896963 0.194513048 8.586346141 0.03179045 0.08930179 6.30E-06 5.200965881 -0.285973719 KIHSQEEALR ddPTM_A459_MK2206_30min_R1 2 KIHSQEEALR 10 1 F2Z2Y4;O00764-3;O00764-2;O00764 F2Z2Y4 PDXK Pyridoxal kinase 0 ; 118.03 0.0039394 9407600 4461.8 3950.4 4659 4675 4718.2 3620.8 4335.9 4688.4 1611.01 2837.4 FALSE TRUE 4082.30048 3693.228242 4342.760061 5035.06931 4530.264103 3825.806567 4046.660022 4647.409813 1778.480255 3188.918533 1.280152013 1.158144432 1.361828474 1.578926918 1.420627105 1.19971913 1.268975667 1.457362352 0.557706394 1 11.63885153 -8.254997924 24.99562588 0.778853182 1.338847675 0.680581042 0.15396408 263.5427614 1022669.777 0.111284904 0.039826586 5.56E-09 8.254997924 0.559994493 KIHSQEEALR ddPTM_A459_MK2206_30min_R2 2 KIHSQEEALR 10 1 F2Z2Y4;O00764-3;O00764-2;O00764 F2Z2Y4 PDXK Pyridoxal kinase 0 ; 125.71 0.0024153 5007200 13239.3 20211.2 14505.6 18260.7 19381.1 18311.1 17722.6 15203.8 17257.2 15543.3 FALSE TRUE 14252.91099 19207.5412 14989.20946 16768.7424 18620.10063 19007.94174 15395.60133 17190.98886 18758.20006 15036.12339 0.947911281 1.277426415 0.996879919 1.115230433 1.238357796 1.264151753 1.023907621 1.143312569 1.247542307 1 13.87614504 -4.733669487 24.55351331 1.146945816 0.947909945 0.242218494 0.104646332 3652.28127 3229049.413 0.025449036 2.358479227 1.85E-05 4.733669487 -0.199035871 KIIPTLEEGLQLPS(ph)PTATSQLPLESDAVECLNYQHYK ddPTM_A459_MK2206_30min_R1 1 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK 37 1 P61978;P61978-2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 KIIPTLEEGLQLPS(0.247)PT(0.247)AT(0.247)S(0.247)QLPLES(0.013)DAVECLNYQHYK 81.077 6.49E-07 19260000 919.38 884.42 1082.9 991.72 1260.2 919.3 910.17 1013.9 621.45 438.15 TRUE FALSE 841.1819031 826.8440972 1009.395765 1068.102446 1210.003565 971.3499716 849.45422 1005.035579 686.0519514 492.4313299 1.70822174 1.679105384 2.049820359 2.169038364 2.457202643 1.972559244 1.725020665 2.040965955 1.393193141 1 8.943778743 -8.451123899 2.618415902 1.000499821 1.985601247 0.670179755 0.226007298 0.165828414 2.416109406 0.240662563 0.065409714 3.54E-09 8.451123899 0.985101425 KIIPTLEEGLQLPSPT(ph)ATSQLPLESDAVECLNYQHYK ddPTM_A459_MK2206_30min_R1 1 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK 37 1 P61978;P61978-2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 KIIPTLEEGLQLPS(0.146)PT(0.675)AT(0.146)S(0.033)QLPLESDAVECLNYQHYK 107.34 1.42E-18 16536000 3369.3 3239.7 3243 3368.2 4322.2 2780.8 3098.6 3458.4 2079.8 1548.3 TRUE FALSE 3082.723342 3028.794941 3022.874196 3627.619348 4150.037622 2938.246493 2891.898048 3428.163573 2296.002653 1740.115093 1.771562901 1.740571617 1.737169115 2.084700812 2.384921341 1.688535721 1.661900445 1.970078639 1.319454478 1 10.76496702 -8.434021964 3.153716722 1.004001424 1.881329529 0.660922793 0.211699158 0.148674911 2.881990274 0.220389203 0.058890668 3.68E-09 8.434021964 0.877328105 KILDSVGIEADDDR ddPTM_A459_MK2206_30min_R2 2 KILDSVGIEADDDR 14 1 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 0 ; 121.92 0.0025023 7620600 74193 64147 66629 64473 53906 69810 67961 67637 49362 74939 FALSE TRUE 79873.27312 60961.55326 68850.37761 59205.34966 51789.37958 72466.66847 59037.63906 76477.38813 53655.41753 72493.74657 1.101795353 0.840921544 0.9497423 0.816695956 0.71439789 0.999626477 0.814382507 1.05495152 0.740138565 1 16.14556893 -4.755327022 24.8746173 0.879448962 1.101795743 0.265587572 0.110010314 252.3827374 1026980.679 0.025718445 0.229808357 1.76E-05 4.755327022 0.222346782 KINS(ph)APPTETK ddPTM_A459_MK2206_30min_R2 1 KINSAPPTETK 11 1 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 KINS(0.991)APPT(0.007)ET(0.002)K 72.321 0.031266 2752000 31141 40380 36455 47058 40026 31331 43538 35756 33774 45394 TRUE FALSE 33525.1789 38374.78792 37670.39151 43213.21087 38454.37813 32523.32316 37821.4083 40429.43197 36711.60147 43912.7975 0.763448945 0.873886204 0.857845404 0.98406873 0.875698665 0.74063428 0.86128442 0.92067539 0.836011449 1 15.42235382 -14.52285552 0.440899983 3.970669818 0.858634516 0.295186706 0.066092208 1685.051205 10.13783659 4875.816007 0.038021022 3.00E-15 14.52285552 -3.112035303 KIPEPS(ph)PVTR ddPTM_A459_MK2206_30min_R1 1 KIPEPSPVTR 10 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;Q7Z4S6-3;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 KIPEPS(0.945)PVT(0.055)R 80.371 0.02451 38631000 3223.5 3704.3 3079.3 3448 3702.9 3198 3895.6 3741.4 3395.6 2965.1 TRUE FALSE 2949.324398 3463.149397 2870.285695 3713.565557 3555.405652 3379.067996 3635.731632 3708.689334 3748.584771 3332.438973 0.885034781 1.039223651 0.861316807 1.114368661 1.066907956 1.013992461 1.091012217 1.112905402 1.124877245 1 11.70236274 -5.772179537 24.9998264 1.07737542 0.939594928 0.565652002 0.058495622 150.08648 349355.8315 0.015934026 0.023905101 1.69E-06 5.772179537 -0.137780492 KIPEPS(ph)PVTR ddPTM_A459_MK2206_30min_R2 1 KIPEPSPVTR 10 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;Q7Z4S6-3;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 KIPEPS(0.979)PVT(0.021)R 70.628 0.037718 229190000 130310 127050 161070 142980 128560 128190 137480 110600 116720 145510 TRUE FALSE 140286.6338 120740.8817 166439.9934 131298.0766 123512.0884 133068.3603 119428.7109 125055.7997 126872.0946 140762.0206 0.996622762 0.857766045 1.182421172 0.932766353 0.877453221 0.945342783 0.848444135 0.888420038 0.90132334 1 17.1028986 -5.983880543 24.98977378 0.903426197 1.006948616 0.232178026 0.082561135 336.3684088 521463.3751 0.022604121 0.03351767 1.04E-06 5.983880543 0.103522419 KIPPVPS(ph)TTSPISTR ddPTM_A459_MK2206_30min_R2 1 KIPPVPSTTSPISTR 15 1 A0A2R8YDD6;O15265-3;O15265;O15265-2 A0A2R8YDD6 ATXN7 Ataxin-7 1 KIPPVPS(0.445)T(0.173)T(0.173)S(0.173)PIS(0.019)T(0.019)R 60.669 0.042451 3742300 22976 26565 23542 27793 25969 23765 28889 18877 18896 20771 TRUE FALSE 24735.06023 25245.82073 24326.87853 25522.22299 24949.32658 24669.39373 25095.8396 21344.28871 20539.53992 20093.24397 1.231013781 1.256433295 1.210699405 1.270189275 1.241677382 1.227745692 1.248969038 1.06226196 1.022211244 1 14.29442288 -7.830609101 3.863469384 1.01970279 1.241748457 0.968594352 0.017671779 0.03482185 1.015059433 0.010380669 0.004752746 1.48E-08 7.830609101 0.222045667 KIQALQQQADEAEDR ddPTM_A459_MK2206_30min_R1 1 KIQALQQQADEAEDR 15 1 P67936;A0A2R8Y5V9;A0A2R8YGX3;A0A590UJB9;A0A590UK79 P67936 TPM4 Tropomyosin alpha-4 chain 0 130.27 0.0010982 9525200 2325.6 2570.6 2571 2420.3 3237.5 3413.4 4020.4 2857.2 2862.7 3580.3 FALSE TRUE 2127.795508 2403.253473 2396.487683 2606.711925 3108.543519 3606.663758 3752.206452 2832.219802 3160.287909 4023.854594 0.528795328 0.59725157 0.59557015 0.647814643 0.77252879 0.896320599 0.932490567 0.703857392 0.785388198 1 11.97436246 -6.235318186 1.974625145 0.849383145 0.575476944 0.731525906 0.078151583 0.191548172 1.467509495 0.027744648 0.036889711 5.82E-07 6.235318186 -0.273906201 KIQALQQQADEAEDR ddPTM_A459_MK2206_30min_R2 1 KIQALQQQADEAEDR 15 1 P67936;A0A2R8Y5V9;A0A2R8YGX3;A0A590UJB9;A0A590UK79 P67936 TPM4 Tropomyosin alpha-4 chain 0 151.22 0.00033905 4369100 35414 52360 48813 52445 46980 44907 48224 36140 33287 32943 FALSE TRUE 38125.32307 49759.87854 50440.40106 48160.07574 45135.32914 46615.96735 41892.13087 40863.62209 36182.24309 31868.07261 1.196348569 1.561433575 1.582787942 1.511232773 1.416318134 1.462779627 1.31454862 1.282274664 1.135375946 1 14.95982415 -8.076434689 0.866851653 1.002802277 1.475419474 0.69211648 0.102296485 0.313126948 0.466620925 0.096020137 0.037144643 8.39E-09 8.076434689 0.472617197 KIQSSLSS(ph)ASPSK ddPTM_A459_MK2206_30min_R2 1 KIQSSLSSASPSK 13 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 KIQSSLS(0.013)S(0.529)AS(0.363)PS(0.095)K 86.455 0.013577 18471000 74356 84197 79080 93278 95837 71392 101490 78824 84890 92476 TRUE FALSE 80048.75253 80015.89941 81716.48773 85656.88902 92073.95784 74108.87259 88164.24109 89126.56744 92273.57875 89458.51569 0.894814227 0.894446982 0.91345678 0.957504027 1.029236369 0.828416077 0.985532125 0.996289361 1.031467804 1 16.4489312 -5.69545281 0.262975128 1.021325807 0.82960478 0.342456013 0.051941025 7.126901592 0.622861398 0.080350199 0.433563148 2.02E-06 5.69545281 -0.191721027 KIQSSLSSAS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 KIQSSLSSASPSK 13 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 KIQSSLS(0.004)S(0.333)AS(0.655)PS(0.008)K 73.168 0.027035 18270000 86850 110250 107100 123890 119350 113060 116730 104100 99399 119840 TRUE FALSE 93499.30278 104775.1453 110670.6605 113767.7907 114663.7193 117362.5775 101403.2108 117706.2274 108044.5453 115929.6306 0.806517732 0.903782275 0.954636532 0.981352137 0.989080347 1.012360489 0.874696229 1.015324786 0.931983866 1 16.82288983 -4.789144258 1.610650652 0.971035821 0.746898675 0.62122617 0.039797409 0.64885966 1.647309928 0.0108015 0.229910212 1.63E-05 4.789144258 -0.224137146 KIQVLQQQADDAEER ddPTM_A459_MK2206_30min_R2 2 KIQVLQQQADDAEER 15 1 P06753-2;A0A087WWU8;P06753-5;P06753-3;P06753-6;P06753-4;D6R904;Q5VU61 P06753-2 TPM3 Tropomyosin alpha-3 chain 0 ; 209.53 1.87E-06 17231000 89404 113327 93280 111925 105534 105204 104151 90562 94581 100435 FALSE TRUE 96248.83898 107699.346 96389.90864 102780.3695 101390.2049 109207.6119 90475.84859 102398.7643 102807.4844 97157.81418 0.990644343 1.108499063 0.992096307 1.057870335 1.043562021 1.12402294 0.931225649 1.053942652 1.058149417 1 16.56804241 -10.72537461 5.156599043 0.999996841 1.040919328 0.046798252 0.054016663 1.86E-06 2.87E-07 0.049480165 0.011999776 1.88E-11 10.72537461 0.040922487 KIS(ph)ENSYSLDDLEIGPGQLSSSTFDSEK ddPTM_A459_MK2206_30min_R2 1 KISENSYSLDDLEIGPGQLSSSTFDSEK 28 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 KIS(0.533)ENS(0.174)Y(0.042)S(0.251)LDDLEIGPGQLSSSTFDSEK 115.32 1.67E-08 0 12925 8796.6 10659 10524 9863.8 7198.2 16487 14707 10861 18883 TRUE FALSE 13914.54794 8359.773635 11014.36574 9664.155535 9476.49765 7472.132545 14322.2371 16629.2554 11805.67015 18266.84926 0.761737711 0.457647267 0.602970199 0.529054321 0.518781182 0.409054262 0.784056237 0.910351597 0.646289351 1 14.15694019 -7.396351795 5.865451117 0.83586138 0.543798055 0.580162598 0.120947373 0.166202271 7.232664031 0.049015694 0.032618363 4.01E-08 7.396351795 -0.292063325 KIS(ph)GTTALQEALK ddPTM_A459_MK2206_30min_R2 2 KISGTTALQEALK 13 1 J3KP58;P30622-2;P30622-1;P30622;F5H0N7;Q9UDT6-2;Q9UDT6 J3KP58;Q9UDT6-2 CLIP1;CLIP2 CAP-Gly domain-containing linker protein 1;CAP-Gly domain-containing linker protein 2 1 KIS(0.874)GT(0.097)T(0.029)ALQEALK;KIS(0.961)GT(0.037)T(0.002)ALQEALK 133.86 0.00065702 16173700 112605 104316 104401 119717 114705 83397 138546 101980 101742 124127 TRUE FALSE 121226.1254 99135.81913 107881.6772 109935.7381 110201.1054 86570.73127 120354.7438 115309.1361 110591.3353 120076.7462 1.009572038 0.82560381 0.898439379 0.915545613 0.917755593 0.720961669 1.002315166 0.96029531 0.92100543 1 16.87359726 KIVEPEVVGES(ph)DSEVEGDAWR ddPTM_A459_MK2206_30min_R1 2 KIVEPEVVGESDSEVEGDAWR 21 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 KIVEPEVVGES(0.829)DS(0.171)EVEGDAWR;KIVEPEVVGES(0.962)DS(0.038)EVEGDAWR 130.57 2.69E-05 8667400 4013.3 4161.2 4697.3 5482.9 5656.1 4696.7 4077.1 4599.6 3039 1913.15 TRUE FALSE 3671.94776 3890.305124 4378.460363 5905.193908 5430.80556 4962.623095 3805.124098 4559.386182 3354.914925 2150.165466 1.707751249 1.809304998 2.036336474 2.746390453 2.52576169 2.308019162 1.769688965 2.120481542 1.560305464 1 11.07023197 -8.544742756 1.151651598 0.997232111 2.17619065 0.568461259 0.314708888 0.439823361 1.275527369 0.335841834 0.106196063 2.85E-09 8.544742756 1.178958539 KKAEPSEVDMNS(ph)PK ddPTM_A459_MK2206_30min_R1 2 KKAEPSEVDMNSPK 14 2 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK 98.077 0.012035 162893000 23593.8 31430.3 29900.9 30987.6 16361.4 15799.1 16627.9 19020.7 22605.4 16436.8 TRUE FALSE 21587.02341 29384.18176 27871.31022 33374.27032 15709.69079 16693.63139 15518.68313 18854.40403 24955.31222 18473.11488 1.168564347 1.590645755 1.5087499 1.806640112 0.850408331 0.903671714 0.840068566 1.02064022 1.35089899 1 14.17313953 -6.271413993 24.99642788 0.983072186 1.523085433 0.626925832 0.198042197 450.8379081 1129799.713 0.062661076 0.071882568 5.35E-07 6.271413993 0.540013247 KKAEPSEVDMNS(ph)PK ddPTM_A459_MK2206_30min_R2 3 KKAEPSEVDMNSPK 14 2 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK 100.04 0.029446 565783000 1003758 898928 886976 708361 892334 499976 1135232 880834 615332 972248 TRUE FALSE 1080606.484 854288.5427 916547.3371 650485.6404 857296.4835 519002.937 986174.6747 995962.0282 668852.4651 940523.6274 1.148941348 0.908311623 0.974507509 0.691620733 0.911509779 0.551823391 1.048537906 1.058944187 0.71114903 1 19.84310466 -4.341911045 1.400256617 0.859348759 1.665173497 0.216156855 0.159697502 5.875549645 4.549352021 0.04553468 9.019704526 4.55E-05 4.341911045 0.805824738 KKDELS(ph)DYAEK ddPTM_A459_MK2206_30min_R1 1 KKDELSDYAEK 11 2 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 KKDELS(1)DYAEK 62.357 0.03529 38244000 7632.9 9862.1 9460.3 8961.8 6136.4 5784.9 8304.2 9032.6 11277 10471 TRUE FALSE 6983.681773 9220.075497 8818.161194 9652.039389 5891.974194 6112.436039 7750.24197 8953.62893 12449.28451 11768.22653 0.593435362 0.783471959 0.749319464 0.820177906 0.500667979 0.51940163 0.658573486 0.760830777 1.057872609 1 13.5226093 -8.140154336 3.322585409 1.031447469 0.664907691 0.673418808 0.100836309 0.165275566 3.217626721 0.09018908 0.029400366 7.24E-09 8.140154336 -0.366539778 KKDELS(ph)DYAEK ddPTM_A459_MK2206_30min_R2 1 KKDELSDYAEK 11 2 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 KKDELS(1)DYAEK 79.885 0.017547 20052000 317150 275550 287110 261170 275770 135700 341440 248910 185030 356650 TRUE FALSE 341431.2478 261866.5877 296682.1041 239831.5756 264941.8842 140864.1586 296608.5179 281443.3916 201123.5749 345012.5397 0.989619821 0.759006 0.859916872 0.695138721 0.767919579 0.408287069 0.859703587 0.815748297 0.582945696 1 18.39628927 -1.522884129 0.897617464 0.724799389 126.874114 0.171246143 0.155233176 1458.776546 3.251055788 0.050047799 376918.1967 0.029999628 1.522884129 126.1493146 KKEEPSQNDIS(ph)PK ddPTM_A459_MK2206_30min_R1 3 KKEEPSQNDISPK 13 2 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK 134.88 0.030546 360622000 15744.21 23529.4 21385.7 21624.8 11596.79 11814.16 11724.91 13665.71 18680.09 14040.93 TRUE FALSE 14405.08226 21997.63178 19934.09827 23290.34584 11134.8653 12483.06753 10942.76265 13546.23214 20621.9522 15780.42641 0.912844931 1.39398209 1.263216706 1.475900919 0.705612447 0.791047542 0.693438971 0.858419905 1.306805765 1 13.94584857 -6.264919751 24.99781848 0.870444014 1.271073768 0.414060871 0.213914767 287.878212 2067685.755 0.066230218 0.078126249 5.43E-07 6.264919751 0.400629753 KKEEPSQNDIS(ph)PK ddPTM_A459_MK2206_30min_R2 3 KKEEPSQNDISPK 13 2 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK 219.95 1.97E-38 448260000 539136 459916 472592 402476 428766 267637 633880 441281 295965 558329 TRUE FALSE 580412.6667 437077.2402 488347.9814 369592.4233 411930.4925 277822.1136 550650.7946 498957.9418 321707.5007 540110.7705 1.074617835 0.809236298 0.904162642 0.684290045 0.762677797 0.514379881 1.01951456 0.923806688 0.595632449 1 19.04289579 KKEMGNS(ph)MK ddPTM_A459_MK2206_30min_R2 1 KKEMGNSMK 9 2 Q13239-4;Q13239-3;Q13239-5 Q13239-4 SLA Src-like-adapter 1 KKEMGNS(1)MK 99.815 0.032958 3715800 27734 32946 28229 33799 29320 29120 27693 24657 22864 22903 TRUE FALSE 29857.33636 31309.94955 29170.14077 31037.51358 28168.74948 30228.18201 24056.87583 27879.75456 24852.66939 22155.67699 1.347615619 1.413179546 1.316598937 1.400883106 1.271400982 1.364353796 1.085810912 1.258357151 1.121729181 1 14.43538879 -7.820687455 0.432700369 0.996344121 1.398295426 0.758420436 0.066350725 0.465266289 0.228373489 0.071213607 0.055033779 1.51E-08 7.820687455 0.401951305 KKEPAITSQNS(ph)PEAR ddPTM_A459_MK2206_30min_R1 2 KKEPAITSQNSPEAR 15 2 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 KKEPAITSQNS(1)PEAR;KKEPAITS(0.003)QNS(0.997)PEAR 171.33 5.26E-05 1278580000 24347 25536 24464 22144 23221 20969.8 23093 22159 19874.6 18105.5 TRUE FALSE 22276.1598 23873.60176 22803.45184 23849.53472 22296.0584 22157.09195 21552.50811 21965.2662 21940.63579 20348.54603 1.094729804 1.173233789 1.120642812 1.172051049 1.095707692 1.088878386 1.059166983 1.079451385 1.078240959 1 14.31263809 -6.681891643 1.806226295 1.061663655 1.140943737 0.589422593 0.031108357 0.245751532 1.652335218 0.011784548 0.011424365 2.08E-07 6.681891643 0.079280082 KKEPAITSQNS(ph)PEAR ddPTM_A459_MK2206_30min_R2 4 KKEPAITSQNSPEAR 15 2 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 KKEPAITSQNS(1)PEAR;KKEPAITS(0.001)QNS(0.999)PEAR;KKEPAIT(0.303)S(0.012)QNS(0.685)PEAR;KKEPAITS(0.007)QNS(0.992)PEAR 129.42 0.0010006 1778630000 888962 1120683 965470 1231048 1004720 902852 1053452 947441 859478 940198 TRUE FALSE 957021.6142 1065031.512 997658.2879 1130467.44 965269.6445 937210.6655 915132.487 1071274.792 934233.8429 909519.4163 1.0522278 1.170982711 1.096907081 1.24292832 1.061296359 1.030446023 1.006171469 1.177847083 1.027173061 1 19.79474491 -6.476853741 24.92233582 1.055592916 1.141328296 0.311094006 0.065599756 534.1903088 289261.6126 0.019904348 0.022568437 3.34E-07 6.476853741 0.08573538 KKEQSEVSVS(ph)PR ddPTM_A459_MK2206_30min_R1 2 KKEQSEVSVSPR 12 2 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 KKEQS(0.001)EVS(0.004)VS(0.995)PR;KKEQSEVSVS(1)PR 166.79 0.01489 30652700 8015.41 8133.98 8560.91 7860.85 8807.45 7769.66 7887.96 8272.74 6481.76 5146.65 TRUE FALSE 7333.657289 7604.456424 7979.819281 8466.294029 8456.630616 8209.571435 7361.768581 8200.412306 7155.562147 5784.255857 1.2678653 1.31468189 1.379575779 1.463679035 1.462008394 1.41929604 1.272725267 1.417712582 1.237075663 1 12.49791565 -8.600443215 2.848765043 1.000146194 1.376699413 0.744644484 0.067400975 0.183856039 3.575518871 0.070264533 0.018791486 2.51E-09 8.600443215 0.37655322 KKLGAGEGGEASVS(ph)PEK ddPTM_A459_MK2206_30min_R2 1 KKLGAGEGGEASVSPEK 17 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KKLGAGEGGEAS(0.006)VS(0.994)PEK 64.422 0.017912 24711000 274720 384710 365830 361010 413230 269150 367680 288390 291820 383740 TRUE FALSE 295752.7744 365605.8608 378026.5896 331514.3282 397004.5139 279392.6919 319403.1743 326083.5632 317201.9761 371218.5952 0.796707865 0.984880244 1.018339583 0.893043432 1.069462896 0.752636574 0.860418035 0.878413871 0.85448838 1 18.50190945 -6.763823534 24.99997217 0.861043928 0.954642507 0.178300454 0.088486852 100.3141911 1051873.156 0.029326211 0.027086324 1.72E-07 6.763823534 0.093598579 KKPAPLPPSS(ph)SPGPPSQDSR ddPTM_A459_MK2206_30min_R2 2 KKPAPLPPSSSPGPPSQDSR 20 2 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KKPAPLPPS(0.157)S(0.687)S(0.157)PGPPSQDSR;KKPAPLPPS(0.123)S(0.438)S(0.438)PGPPSQDSR 94.456 0.00043564 38649000 136158 171231 139386 175096 152233 143792 156190 133215 127922 149109 TRUE FALSE 146582.3612 162727.9175 144033.0597 160790.0967 146255.5675 149264.1053 135682.0654 150626.6579 139048.4243 144243.5855 1.01621407 1.128146648 0.998540484 1.114712284 1.013948502 1.034805844 0.940645401 1.044252036 0.963983416 1 17.13814764 -6.695816199 2.040989415 0.992330231 1.063629194 0.319195297 0.046319942 0.365451945 3.128619875 0.016683676 0.016033659 2.01E-07 6.695816199 0.071298963 KKPGDASSLPDAGLS(ph)PGSQVDSK ddPTM_A459_MK2206_30min_R2 1 KKPGDASSLPDAGLSPGSQVDSK 23 2 M0R300;M0R0P8;Q13459-2;Q13459 M0R300 MYO9B Unconventional myosin-IXb 1 KKPGDASSLPDAGLS(0.816)PGS(0.183)QVDS(0.001)K 107.17 2.20E-05 3732000 23123 20608 23000 19874 23445 17881 21641 17210 19672 20781 TRUE FALSE 24893.31466 19584.63669 23766.80852 18250.23063 22524.4315 18561.47398 18799.5107 19459.40609 21383.035 20102.91767 1.238293618 0.974218619 1.182256671 0.907839893 1.12045584 0.92332239 0.935163294 0.967989145 1.063678186 1 14.29511728 -1.522878745 0.670152283 0.989557954 22.59730173 0.357570723 0.087443046 270.0006684 1.61302685 0.033853031 8692.897459 0.03 1.522878745 21.60774378 KKS(ph)EPDDELLFDFLNSSQK ddPTM_A459_MK2206_30min_R1 1 KKSEPDDELLFDFLNSSQK 19 2 Q8TBA6-2;Q8TBA6 Q8TBA6-2 GOLGA5 Golgin subfamily A member 5 1 KKS(1)EPDDELLFDFLNSSQK 69.522 0.0068272 8614000 2120.9 2823.7 2113.4 1517 1123 1261.4 2057.7 1489.5 2787 2800.7 TRUE FALSE 1940.506318 2639.876617 1969.948296 1633.839603 1078.268532 1332.819378 1920.434587 1476.477459 3076.718623 3147.67186 0.616489394 0.838675927 0.625842967 0.519062874 0.342560654 0.423430217 0.610112703 0.469069688 0.977458503 1 11.62006943 -8.269913409 23.82932606 0.98872948 0.556513953 0.647054658 0.127938355 252.8345582 710964.8969 0.131266549 0.036268747 5.37E-09 8.269913409 -0.432215526 KKS(ph)EPDDELLFDFLNSSQKEPTGR ddPTM_A459_MK2206_30min_R1 2 KKSEPDDELLFDFLNSSQKEPTGR 24 3 Q8TBA6-2;Q8TBA6 Q8TBA6-2 GOLGA5 Golgin subfamily A member 5 1 KKS(1)EPDDELLFDFLNSSQKEPTGR;KKS(1)EPDDELLFDFLNSSQKEPTGR 99.409 4.11E-06 17690600 7292.9 8083.7 6318.3 6735.9 5905.6 4038.6 4918.6 6037.7 6908.2 4487.2 TRUE FALSE 6672.600558 7557.449661 5889.4314 7254.700185 5670.367447 4267.262042 4590.489168 5984.913025 7626.332111 5043.108213 1.323112707 1.498569799 1.167817773 1.438537481 1.124379491 0.846157144 0.910249984 1.186750863 1.512228528 1 12.30009747 -6.352896464 5.883963182 1.081255179 1.352868232 0.315362102 0.187731633 0.302799453 15.73142358 0.062463529 0.071016436 4.44E-07 6.352896464 0.271613052 KKS(ph)PIINESR ddPTM_A459_MK2206_30min_R2 1 KKSPIINESR 10 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 KKS(1)PIINESR 68.626 0.031054 411390000 265520 274420 251190 274060 244980 166700 288200 221210 193600 238560 TRUE FALSE 285848.4154 260792.7018 259564.5492 251668.4213 235360.8543 173043.8853 250358.9938 250122.9065 210438.9781 230775.8067 1.23864117 1.130069506 1.124747663 1.090532083 1.019867973 0.749835469 1.084858059 1.083835043 0.911876254 1 17.81613246 -6.022702082 1.919358733 0.973197138 1.167953316 0.46237816 0.093824209 0.336218374 2.481024898 0.032127836 0.05068933 9.49E-07 6.022702082 0.194756179 KKS(ph)PNELVDDLFK ddPTM_A459_MK2206_30min_R1 4 KKSPNELVDDLFK 13 2 Q9UNZ2-4;Q9UNZ2;Q9UNZ2-5;F2Z2K0 Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 1 KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK 134.18 0.00048826 383091800 53318.1 64693 62961.9 56797.5 42517.2 37304.9 44198.8 51760.6 52820.7 47911.3 TRUE FALSE 48783.11561 60481.47394 58688.22165 61172.05329 40823.64989 39417.0712 41250.3787 51308.06253 58311.60079 53846.91356 0.905959365 1.123211526 1.089908739 1.13603639 0.758142801 0.732020994 0.766067653 0.952850575 1.08291445 1 15.71657603 -6.254150785 24.98321822 0.866346431 1.069890598 0.346449995 0.121056894 636.4620464 2181609.295 0.03855006 0.048725712 5.57E-07 6.254150785 0.203544166 KKS(ph)PNELVDDLFK ddPTM_A459_MK2206_30min_R2 4 KKSPNELVDDLFK 13 2 Q9UNZ2-4;Q9UNZ2;Q9UNZ2-5;F2Z2K0 Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 1 KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK 108.32 0.0024716 116010000 438977 461930 458044 410094 412793 250050.3 485713 378314 314344 472229 TRUE FALSE 472585.4166 438991.2279 473314.9583 376588.0084 396584.6727 259566.1394 421938.2997 427760.9387 341685.0729 456820.2064 1.034510755 0.960971563 1.036107755 0.824368106 0.868141705 0.568201966 0.923641936 0.936387955 0.747964009 1 18.80126694 -5.766529504 24.98499741 0.82927042 1.005574192 0.32210243 0.113837712 141.798704 696026.2895 0.031907536 0.0489933 1.71E-06 5.766529504 0.176303772 KKTEFLDLDNSPLSPPS(ph)PR ddPTM_A459_MK2206_30min_R1 1 KKTEFLDLDNSPLSPPSPR 19 2 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 KKTEFLDLDNSPLS(0.001)PPS(0.999)PR 91.481 0.0027835 17367000 2999.9 2198.1 2624.1 2628.1 4298.7 3612.9 3298.7 3450.3 1890.6 1737.1 TRUE FALSE 2744.742752 2055.00329 2445.983403 2830.516717 4127.473676 3817.459276 3078.649742 3420.134391 2087.134636 1952.305062 1.405898496 1.052603576 1.252869467 1.449833211 2.114154061 1.955360025 1.576930676 1.751844246 1.069061734 1 10.93096279 -5.915627558 4.259171831 1.645197141 1.222488292 0.147996057 0.338945907 0.322088267 10.94889107 0.097812736 0.148691451 1.21E-06 5.915627558 -0.422708849 KKTEFLDLDNSPLSPPS(ph)PR ddPTM_A459_MK2206_30min_R2 2 KKTEFLDLDNSPLSPPSPR 19 2 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 KKTEFLDLDNSPLS(0.001)PPS(0.999)PR;KKTEFLDLDNSPLS(0.001)PPS(0.999)PR 80.002 0.0025755 32333000 195157 261110 240404 275410 280730 275609 256689 222794 258118 243407 TRUE FALSE 210098.37 248143.6571 248418.9494 252908.122 269707.1296 286097.4936 222985.426 251913.9408 280568.6371 235464.6495 0.892271389 1.053846756 1.055015901 1.074081067 1.145425142 1.215033739 0.947001711 1.069858857 1.191553117 1 17.84515096 -3.974752899 1.181773904 1.093932547 3.34E-15 0.364397391 0.077009446 9.769291943 2.830673672 0.0233284 20.83681234 0.000105986 3.974752899 -1.093932547 KKVEEEDEEEEEEEEEEEEEEDE ddPTM_A459_MK2206_30min_R1 1 KKVEEEDEEEEEEEEEEEEEEDE 23 2 O15347 O15347 HMGB3 High mobility group protein B3 0 78.021 0.0070964 0 227.07 194.5 193.42 232.47 254.53 245.52 327.85 282.43 176.26 194.62 FALSE TRUE 207.7565041 181.8380146 180.2911893 250.3748797 244.3915311 259.4211302 305.9797247 279.9607443 194.5828578 218.7309949 0.94982654 0.831331722 0.824259906 1.144670328 1.117315501 1.186028209 1.398885992 1.279931746 0.889598924 1 7.773013859 -5.788885099 7.569489957 1.168719153 0.864600505 0.45876841 0.136079843 0.152234276 32.10136291 0.039414491 0.060063709 1.63E-06 5.788885099 -0.304118648 KLANDFPLDLS(ph)PVK ddPTM_A459_MK2206_30min_R1 2 KLANDFPLDLSPVK 14 1 Q96JM2;Q96JM2-3 Q96JM2 ZNF462 Zinc finger protein 462 1 KLANDFPLDLS(1)PVK;KLANDFPLDLS(1)PVK 133.52 0.00036938 21672000 11931.2 14027.5 14613.1 11977.1 11182.9 10756.4 11973.5 13081.4 11548 10654.6 TRUE FALSE 10916.38879 13114.3072 13621.20349 12899.57832 10737.46141 11365.41807 11174.76966 12967.0307 12748.45592 11974.57229 0.911630789 1.095179593 1.137510648 1.077247522 0.896688513 0.949129355 0.933208251 1.08288049 1.064627247 1 13.54768651 -2.786259792 15.31985896 1.017112119 0.476987097 0 0.082687523 0 0 0.020450896 0 0.001635838 2.786259792 -0.540125022 KLANDFPLDLS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 KLANDFPLDLSPVK 14 1 Q96JM2;Q96JM2-3 Q96JM2 ZNF462 Zinc finger protein 462 1 KLANDFPLDLS(1)PVK;KLANDFPLDLS(1)PVK 127.53 0.00062041 7353700 177968 192439 197310 182601 202545 151647 216385 146271 162842 222706 TRUE FALSE 191593.3669 182882.7591 203888.2169 167681.9142 194592.0656 157418.0328 187973.3896 165389.1219 177005.7028 215439.1215 0.889315578 0.848883703 0.946384369 0.778326207 0.903234586 0.730684528 0.872512793 0.767683793 0.821604273 1 17.71692073 -5.764531124 24.99993184 0.829010599 0.890263459 0.090614935 0.075864698 162.2034979 1311597.249 0.019548344 0.030440138 1.72E-06 5.764531124 0.061252861 KLCQPQSTGSLLGDPAAS(ph)SPPGER ddPTM_A459_MK2206_30min_R1 2 KLCQPQSTGSLLGDPAASSPPGER 24 1 U3KQ90;P55199 U3KQ90 ELL RNA polymerase II elongation factor ELL 1 KLCQPQSTGSLLGDPAAS(0.763)S(0.237)PPGER;KLCQPQSTGSLLGDPAAS(0.774)S(0.226)PPGER 168.45 4.16E-16 55234000 9324.1 9808 9247.7 8950.5 10497.1 9533.4 9749.3 9288.7 6846.6 5487.3 TRUE FALSE 8531.036332 9169.497417 8619.99189 9639.869061 10078.97828 10073.17287 9098.941986 9207.489875 7558.328571 6167.108151 1.383312263 1.486839081 1.397736456 1.563110104 1.634311906 1.633370556 1.475398479 1.492999579 1.225587161 1 12.59037843 -8.459622065 2.104336454 1.000953893 1.517366062 0.810022963 0.080367117 0.134381577 1.302722305 0.084625737 0.023640422 3.47E-09 8.459622065 0.51641217 KLCQPQSTGSLLGDPAAS(ph)SPPGER ddPTM_A459_MK2206_30min_R2 1 KLCQPQSTGSLLGDPAASSPPGER 24 1 U3KQ90;P55199 U3KQ90 ELL RNA polymerase II elongation factor ELL 1 KLCQPQSTGSLLGDPAAS(0.683)S(0.316)PPGER 46.194 0.033631 23334000 22394 42708 39797 43420 55030 45403 46397 40486 42839 39105 TRUE FALSE 24108.50186 40587.18282 41123.81212 39872.44711 52869.2457 47130.84298 40305.01817 45777.65921 46565.05878 37829.00705 0.637302 1.072911662 1.087097318 1.054017808 1.397584812 1.245891623 1.065452712 1.21012056 1.230935264 1 15.20720529 -4.450807475 1.349974699 1.18159921 6.77E-14 0.662900247 0.11128949 1.710649352 1.553835865 0.032552218 3.432874193 3.54E-05 4.450807475 -1.18159921 KLCQPQSTGSLLGDPAASS(ph)PPGER ddPTM_A459_MK2206_30min_R2 1 KLCQPQSTGSLLGDPAASSPPGER 24 1 U3KQ90;P55199 U3KQ90 ELL RNA polymerase II elongation factor ELL 1 KLCQPQSTGSLLGDPAAS(0.492)S(0.508)PPGER 108.23 2.48E-07 21158000 26964 41066 30513 52408 42825 45266 44456 32759 41117 35305 TRUE FALSE 29028.38457 39026.72216 31530.28819 48126.09876 41143.47532 46988.62935 38618.8738 37040.71378 44693.28234 34153.00074 0.849951218 1.142702583 0.923206966 1.409132366 1.204681124 1.375827258 1.130760781 1.084552249 1.308619488 1 15.05972472 -4.583808563 1.02052865 1.20952943 0.593769648 0.317905191 0.146457834 3.100846555 2.003981142 0.046285766 2.297424501 2.61E-05 4.583808563 -0.615759782 KLDEAVAEAHLGK ddPTM_A459_MK2206_30min_R1 2 KLDEAVAEAHLGK 13 1 P23526-2;P23526 P23526-2 AHCY Adenosylhomocysteinase 0 ; 83.204 0.021257 21908600 20552 21616.9 22092.4 19902.1 21419.4 18546.3 20251.2 20177.4 18808.1 17482 FALSE TRUE 18803.94448 20209.63588 20592.82944 21434.96319 20566.21994 19596.37548 18900.2794 20000.99112 20763.2693 19647.80214 0.957050786 1.028595246 1.048098372 1.090959846 1.046744048 0.997382574 0.961953875 1.017976004 1.056773127 1 14.26208032 KLDELYGTWR ddPTM_A459_MK2206_30min_R1 1 KLDELYGTWR 10 1 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 0 113.67 0.010129 17727000 3597.7 4402.5 4523.6 3803.7 4782.3 4099.2 4422.5 4475.7 3588.4 3013.6 FALSE TRUE 3291.696723 4115.89645 4216.550635 4096.661633 4591.810864 4331.293162 4127.483094 4436.569427 3961.427021 3386.94752 0.971877097 1.215222978 1.244941237 1.209543877 1.355737235 1.278819095 1.218643947 1.309902029 1.169615708 1 11.72576992 -4.759130549 4.188894625 1.24006948 0.944328994 0.393531316 0.091527564 0.211229319 7.333243092 0.021277604 0.193842666 1.74E-05 4.759130549 -0.295740486 KLDFNS(ph)PGGSSPVENSDCSTNSR ddPTM_A459_MK2206_30min_R2 2 KLDFNSPGGSSPVENSDCSTNSR 23 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 KLDFNS(0.995)PGGS(0.004)S(0.001)PVENSDCSTNSR;KLDFNS(1)PGGSSPVENSDCSTNSR 111.95 7.17E-06 9353000 23937 29652 26372 29475 29074 24244 31206 23981 26993 29642 TRUE FALSE 25769.63512 28179.5248 27251.22932 27066.79821 27932.40867 25166.62241 27108.61471 27115.39904 29340.80235 28674.78397 0.898686287 0.982728408 0.950355174 0.943923352 0.974110518 0.877656914 0.945381655 0.94561825 1.023226622 1 14.807495 -8.243256555 11.29372203 1.011615836 0.940974343 0.476645423 0.030076894 0.595233739 371.1372629 0.020752723 0.007535469 5.71E-09 8.243256555 -0.070641493 KLDFNSPGGSS(ph)PVENSDCSTNSR ddPTM_A459_MK2206_30min_R2 2 KLDFNSPGGSSPVENSDCSTNSR 23 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 KLDFNS(0.046)PGGS(0.262)S(0.691)PVENSDCSTNSR;KLDFNSPGGS(0.067)S(0.921)PVENS(0.012)DCSTNSR 122.38 5.39E-06 17756400 38851 44118 41735 39785 43884 40768 52595 39860 42963 42560 TRUE FALSE 41825.46243 41927.16427 43126.42407 36534.43823 42160.89366 42319.45481 45689.21332 45069.83886 46699.84408 41171.27069 1.01588952 1.018359734 1.047488293 0.887376989 1.024036736 1.027887993 1.109735322 1.094691471 1.134282312 1 15.32935036 -7.036531132 2.676596451 1.092406457 0.996393406 0.37510114 0.051826243 0.281005482 4.013377541 0.021378919 0.016731393 9.19E-08 7.036531132 -0.096013051 KLDPAQSAS(ph)RENLLEEQGSIALR ddPTM_A459_MK2206_30min_R1 1 KLDPAQSASRENLLEEQGSIALR 23 2 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 1 KLDPAQS(0.252)AS(0.748)RENLLEEQGSIALR 67.88 0.0013365 8659000 1611.9 852.5 890.31 975.76 1430 1132.5 1465.6 1370.7 1133 891.86 TRUE FALSE 1474.799441 797.0020951 829.8782377 1050.913204 1373.040072 1196.621171 1367.832498 1358.716114 1250.779404 1002.35035 1.471341274 0.795133254 0.827932307 1.048448982 1.369820514 1.193815288 1.364625151 1.355530144 1.247846528 1 9.969171144 -6.149041465 5.609721564 1.274688262 0.997924931 0.21454072 0.200304374 0.29417185 12.66111579 0.058249991 0.075854947 7.10E-07 6.149041465 -0.276763331 KLDPAQSAS(ph)RENLLEEQGSIALR ddPTM_A459_MK2206_30min_R2 1 KLDPAQSASRENLLEEQGSIALR 23 2 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 1 KLDPAQS(0.22)AS(0.78)RENLLEEQGSIALR 54.058 0.024428 2813500 1640.6 4334.4 3527.3 7404.9 5772.8 4849.6 6727.4 4952.3 4947.4 4591 TRUE FALSE 1766.205597 4119.159999 3644.898422 6799.895983 5546.130866 5034.154926 5844.084299 5599.582614 5377.715909 4441.196046 0.397686925 0.927488892 0.820701987 1.531095658 1.248792174 1.133513332 1.315880731 1.260827614 1.210871093 1 12.11673254 -4.770040807 1.123448253 1.242346385 0.014728827 0.690242334 0.167202521 0.923792984 0.947529419 0.051046055 1.360530013 1.70E-05 4.770040807 -1.227617557 KLDVEEPDSANS(ph)SFYSTR ddPTM_A459_MK2206_30min_R1 1 KLDVEEPDSANSSFYSTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 KLDVEEPDSANS(0.495)S(0.495)FYS(0.007)T(0.002)R 147.08 0.00011734 11800000 6177.9 5886.9 5793.2 5900.2 5561.7 4795.4 5603.5 5488.8 5534.6 5526.7 TRUE FALSE 5652.437164 5503.66174 5399.973725 6354.634426 5340.165712 5066.911404 5229.700739 5440.812 6109.941476 6211.38932 0.910011734 0.886059697 0.869366489 1.023061685 0.859737723 0.815745261 0.841953462 0.87594123 0.983667447 1 12.60070028 -8.296327985 5.634864852 0.995060158 0.884645711 0.399145374 0.052353166 0.221291686 19.91166561 0.051303081 0.014129595 5.05E-09 8.296327985 -0.110414448 KLDVEEPDSANSS(ph)FYSTR ddPTM_A459_MK2206_30min_R1 1 KLDVEEPDSANSSFYSTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 KLDVEEPDSANS(0.238)S(0.746)FYS(0.012)T(0.004)R 171.9 3.01E-08 13820000 6547.5 5760.2 5081.6 5716.6 5498 4691.3 5767 4888.7 5069.4 4620.4 TRUE FALSE 5990.600743 5385.209933 4736.67515 6156.893523 5279.003018 4956.917352 5382.293952 4845.958611 5596.382271 5192.810034 1.153633717 1.037051211 0.912160298 1.185657377 1.016598524 0.954573212 1.036489669 0.933205447 1.077717504 1 12.34229973 -6.507494425 24.73501536 0.997045788 1.063560948 0.157225789 0.077844426 1250.964717 2011313.51 0.024206745 0.026566814 3.11E-07 6.507494425 0.066515161 KLEAAEDIAYQLSR ddPTM_A459_MK2206_30min_R1 1 KLEAAEDIAYQLSR 14 1 P35232 P35232 PHB Prohibitin 0 133.48 0.00097849 10148000 2398.4 2609 2763.2 2223.8 2444.3 2170.1 2261.3 2068.9 2118.8 1687.3 FALSE TRUE 2194.403486 2439.153626 2575.641683 2395.077461 2346.938355 2292.969187 2110.452803 2050.811825 2339.056842 1896.335462 1.157181063 1.286245854 1.358220491 1.263003044 1.237617711 1.209157996 1.112911109 1.081460462 1.233461531 1 10.88899848 -7.014313653 1.789112702 1.11101406 1.271271607 0.511654973 0.070632621 0.302530032 1.946650197 0.032919422 0.024843751 9.68E-08 7.014313653 0.160257546 KLEESASFESLSPSSRPAS(ph)PTR ddPTM_A459_MK2206_30min_R2 1 KLEESASFESLSPSSRPASPTR 22 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 KLEESASFES(0.021)LS(0.021)PS(0.137)S(0.137)RPAS(0.577)PT(0.107)R 41.689 0.0442 5401700 14843 19944 24083 23655 27356 18625 22571 26534 25854 22164 TRUE FALSE 15979.39149 18953.60996 24885.9152 21722.31083 26281.86599 19333.78743 19607.40059 30002.0849 28102.73419 21440.7905 0.74527996 0.883997722 1.160680862 1.013130129 1.225788107 0.901729226 0.914490564 1.399299383 1.31071353 1 14.38807048 -5.072409303 2.951806546 1.115861936 0.752656243 0.384426742 0.156415408 0.302730343 4.881899735 0.043982745 0.184947823 8.46E-06 5.072409303 -0.363205694 KLEEVLS(ph)TEGAEENGNSDK ddPTM_A459_MK2206_30min_R1 1 KLEEVLSTEGAEENGNSDK 19 1 O15355 O15355 PPM1G Protein phosphatase 1G 1 KLEEVLS(0.93)T(0.07)EGAEENGNSDK 102.73 0.0005461 14629000 3870.2 3896.9 3458.6 2979 3174.8 2790.2 3423.9 3119.7 3524.9 3342.9 TRUE FALSE 3541.019167 3643.211102 3223.839868 3208.443096 3048.340993 2948.178713 3195.497878 3092.424792 3891.325969 3757.04369 0.942501461 0.969701553 0.858078887 0.853980779 0.811366927 0.784707061 0.850535193 0.823100567 1.035741474 1 11.87538218 -8.265738844 24.9696438 1.017870761 0.860342922 0.573459434 0.0538482 303.8738818 1764746.39 0.052426607 0.015345125 5.42E-09 8.265738844 -0.157527839 KLEEVLST(ph)EGAEENGNSDK ddPTM_A459_MK2206_30min_R1 1 KLEEVLSTEGAEENGNSDK 19 1 O15355 O15355 PPM1G Protein phosphatase 1G 1 KLEEVLS(0.409)T(0.591)EGAEENGNSDK 67.418 0.025979 5423800 1960.9 2230 2311.4 1733.8 1374.9 1253.4 1787.3 1686.2 2661 2952.7 TRUE FALSE 1794.115158 2084.826595 2154.508608 1867.337576 1320.134822 1324.366425 1668.072478 1671.457731 2937.620472 3318.502768 0.540639946 0.628243139 0.649241166 0.562704842 0.397810372 0.399085527 0.502658155 0.503678269 0.885224656 1 11.69631676 -8.351454876 3.615387554 0.991878909 0.522135028 0.820897193 0.079062487 0.106040529 2.446528675 0.087827133 0.023589807 4.45E-09 8.351454876 -0.469743881 KLEEVLST(ph)EGAEENGNSDK ddPTM_A459_MK2206_30min_R2 1 KLEEVLSTEGAEENGNSDK 19 1 O15355 O15355 PPM1G Protein phosphatase 1G 1 KLEEVLS(0.423)T(0.577)EGAEENGNSDK 65.387 0.030042 4511800 28590 30993 29158 27181 22937 22040 34925 25391 23537 29087 TRUE FALSE 30778.87238 29453.93269 30130.11317 24960.22535 22036.37813 22878.74764 30339.30555 28709.69088 25584.20571 28137.89357 1.093858441 1.04677106 1.070802016 0.887068013 0.783156638 0.81309383 1.078236559 1.020321255 0.909243816 1 14.78022671 -5.753119598 24.97725468 0.923673691 1.068106613 0.368124408 0.085850404 222.7898406 668841.774 0.026374866 0.044724425 1.77E-06 5.753119598 0.144432922 KLEGNSPQGS(ph)NQGVK ddPTM_A459_MK2206_30min_R2 1 KLEGNSPQGSNQGVK 15 1 P61006 P61006 RAB8A Ras-related protein Rab-8A 1 KLEGNSPQGS(1)NQGVK 120.9 0.00089209 2619600 8719.9 6307.3 6008 6948.8 7219.7 6264.2 10932 6000.4 9620.5 7786.5 TRUE FALSE 9387.502248 5994.088654 6208.303721 6381.060812 6936.218302 6502.588521 9496.615268 6784.672882 10457.2737 7532.427143 1.246278533 0.795771209 0.824210258 0.847145374 0.920847712 0.863279312 1.260764305 0.900728643 1.388300677 1 12.8788991 -7.246365536 24.71605586 1.129175797 0.903662343 0.283414492 0.171404501 868.7985096 1424540.395 0.062292784 0.048048351 5.67E-08 7.246365536 -0.225513455 KLEKEEEEGISQES(ph)SEEEQ ddPTM_A459_MK2206_30min_R2 1 KLEKEEEEGISQESSEEEQ 19 2 P17096;P17096-2 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KLEKEEEEGIS(0.09)QES(0.455)S(0.455)EEEQ 70.942 0.017145 6251900 8517.9 19568 13936 19668 20814 15403 18127 14081 13832 12672 TRUE FALSE 9170.036973 18596.28157 14400.61928 18061.06149 19996.73778 15989.17196 15746.90313 15921.43505 15035.08236 12258.51368 0.748054553 1.517009489 1.174744318 1.473348398 1.631253046 1.304332024 1.284568712 1.298806321 1.226501251 1 13.58149645 -8.774558478 1.242505882 1.000379211 1.327298498 0.136541325 0.225939307 1.698449591 4.800650382 0.210955842 0.064139641 1.68E-09 8.774558478 0.326919287 KLELDGEKETAPEEPGS(ph)PAK ddPTM_A459_MK2206_30min_R1 1 KLELDGEKETAPEEPGSPAK 20 2 P35612 P35612 ADD2 Beta-adducin 1 KLELDGEKETAPEEPGS(1)PAK 95.834 0.0011661 18954000 2131.3 2628.9 3091.6 2436.7 1590.7 1579.4 2326.8 2143.6 2900.6 2808.8 TRUE FALSE 1950.021743 2457.758132 2881.750806 2624.375056 1527.339051 1668.824263 2171.583417 2124.858731 3202.12775 3156.775349 0.617725852 0.778566056 0.912878012 0.831346791 0.48382887 0.528648408 0.687911928 0.673110531 1.014366686 1 11.62423588 -8.262778758 24.46525735 1.007183408 0.692174308 0.515861968 0.123174086 81.8212419 1494443.521 0.112736357 0.035256867 5.46E-09 8.262778758 -0.3150091 KLELDGEKETAPEEPGS(ph)PAK ddPTM_A459_MK2206_30min_R2 2 KLELDGEKETAPEEPGSPAK 20 2 P35612 P35612 ADD2 Beta-adducin 1 KLELDGEKETAPEEPGS(1)PAK;KLELDGEKETAPEEPGS(1)PAK 58.054 0.014339 42471000 272056 221169 274782 211740 226499 138128 275310 211742 181348 300410 TRUE FALSE 292884.8165 210186.0691 283943.0947 194440.1647 217605.5112 143384.5578 239161.4663 239417.4064 197121.3212 290607.6463 1.007835892 0.72326407 0.97706684 0.669081379 0.748794858 0.493395682 0.822970315 0.823851022 0.678307415 1 18.14871314 -1.522911757 0.886579477 0.74708676 108.3888609 0.17328695 0.143706438 1432.991296 3.373678692 0.047306908 311837.2244 0.02999772 1.522911757 107.6417741 KLELSENR ddPTM_A459_MK2206_30min_R2 1 KLELSENR 8 1 Q92688-2;Q92688 Q92688-2 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 0 88.177 0.042532 22219000 109350 171210 167300 190370 169910 179380 173600 145630 156310 160320 FALSE TRUE 117721.9201 162707.9604 172877.6985 174816.162 163238.4797 186206.4316 150806.1115 164664.341 169905.5613 155088.7715 0.759061529 1.04912792 1.114701579 1.127200637 1.052548667 1.200644184 0.97238575 1.061742507 1.095537476 1 17.24273471 -4.763302506 4.275879493 1.081862109 0.728895365 0.707335532 0.061152408 0.115005701 4.305237191 0.014871879 0.127025597 1.72E-05 4.763302506 -0.352966744 KLENS(ph)PLGEALR ddPTM_A459_MK2206_30min_R2 2 KLENSPLGEALR 12 1 D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;D6RDK6;D6RBN5;Q9NX40-3;Q9NX40-2;Q9NX40-4;Q9NX40 D6RI08 OCIAD1 OCIA domain-containing protein 1 1 KLENS(1)PLGEALR;KLENS(1)PLGEALR 66.738 0.038195 49138900 119264 112427 121258 123490 117253 116288 152581 115552 108942 140300 TRUE FALSE 128394.9435 106844.0387 125300.6812 113400.472 112649.0581 120713.4213 132546.9314 130655.0431 118417.5782 135722.0225 0.946014075 0.787226986 0.923215547 0.835534793 0.829998375 0.889416611 0.976605926 0.962666491 0.872500837 1 17.05029531 -7.080922869 4.904622543 0.949124932 0.86149045 0.387566631 0.052520494 0.230261084 9.742858545 0.019345639 0.015040431 8.30E-08 7.080922869 -0.087634482 KLEVEANNAFDQYR ddPTM_A459_MK2206_30min_R1 1 KLEVEANNAFDQYR 14 1 A0A6I8PRV6;B1AK87;B1AK85;B1AK88;P47756-2;P47756 A0A6I8PRV6 CAPZB F-actin-capping protein subunit beta 0 96.247 0.016142 7715500 1843.7 1690.3 1880.3 1977.8 1545.9 1439.7 1307 1390.9 1194.7 1391.4 FALSE TRUE 1686.883633 1580.261163 1752.670475 2130.130499 1484.32353 1521.21457 1219.812415 1378.739508 1318.89334 1563.777137 1.078723812 1.010541161 1.120793004 1.362170126 0.949191221 0.972782204 0.780042364 0.881672635 0.843402368 1 10.6108192 -6.499039221 20.78798459 0.889854493 1.134961499 0.571760522 0.101862696 69.03646323 60199.34635 0.033240766 0.037349142 3.17E-07 6.499039221 0.245107006 KLFAPQQILQCS(ph)PAN ddPTM_A459_MK2206_30min_R2 1 KLFAPQQILQCSPAN 15 1 K7ERV3;P04183 K7ERV3 TK1 "Thymidine kinase;Thymidine kinase, cytosolic" 1 KLFAPQQILQCS(1)PAN 91.123 0.026683 26598000 68007 78496 62837 82797 76686 72159 68759 52453 61110 61929 TRUE FALSE 73213.66821 74598.00278 64931.95422 76032.22025 73674.92232 74905.06131 59730.86071 59308.7872 66425.23734 59908.2618 1.222096352 1.245203926 1.083856421 1.269144154 1.229795693 1.250329405 0.997038787 0.989993457 1.108782584 1 15.87046735 -7.263122678 24.98242344 1.023119821 1.214967187 0.734642925 0.056754605 79.4151861 1178614.65 0.023043932 0.01644535 5.46E-08 7.263122678 0.191847366 KLGAGEGGEASVS(ph)PEK ddPTM_A459_MK2206_30min_R1 4 KLGAGEGGEASVSPEK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLGAGEGGEAS(0.017)VS(0.983)PEK;KLGAGEGGEAS(0.048)VS(0.952)PEK;KLGAGEGGEAS(0.01)VS(0.99)PEK;KLGAGEGGEAS(0.008)VS(0.992)PEK 204.71 3.80E-07 93085900 13845.59 16457.34 15865.28 13266.33 10534.54 9506.68 12259.48 11934.32 16887.4 17214.05 TRUE FALSE 12667.94986 15385.96417 14788.389 14288.10504 10114.92696 10044.94001 11441.67246 11829.9795 18642.90566 19346.65647 0.654787554 0.795277685 0.76438991 0.738530973 0.522825584 0.519208062 0.591403092 0.611474107 0.963624164 1 14.23979664 -8.268926721 20.3767485 0.98181342 0.650844187 0.685562585 0.089955475 32.53298308 88522.16259 0.092469734 0.026295309 5.38E-09 8.268926721 -0.330969233 KLGAGEGGEASVS(ph)PEK ddPTM_A459_MK2206_30min_R2 3 KLGAGEGGEASVSPEK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLGAGEGGEAS(0.006)VS(0.994)PEK;KLGAGEGGEAS(0.002)VS(0.998)PEK;KLGAGEGGEAS(0.003)VS(0.997)PEK 118.66 0.0031327 72710000 175217 168963.2 155437.4 138627.6 152818.5 100261.8 180364.6 139513.2 99512 182453.8 TRUE FALSE 188631.7482 160572.7332 160619.6053 127301.2816 146818.0778 104077.3331 156682.5114 157748.0543 108167.3739 176500.3474 1.068733014 0.909758737 0.910024301 0.7212523 0.831828832 0.589672114 0.887717864 0.893754922 0.612845105 1 17.4293115 -4.934781371 1.218238965 0.785827519 1.136877428 0.316777734 0.122940212 1.334032074 2.056908074 0.036529105 0.554448042 1.16E-05 4.934781371 0.351049909 KLGAGEGGEASVS(ph)PEKTSTTSK ddPTM_A459_MK2206_30min_R1 1 KLGAGEGGEASVSPEKTSTTSK 22 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLGAGEGGEAS(0.056)VS(0.645)PEKT(0.047)S(0.047)T(0.056)T(0.067)S(0.081)K 53.705 0.01166 87115000 6041.4 6991.6 6931 8014.2 6107.9 4746.4 4888.8 6831.2 3555 2073.4 TRUE FALSE 5527.547205 6536.445569 6460.543031 8631.455073 5864.609409 5015.137066 4562.677072 6771.475539 3924.554972 2330.268445 2.372064565 2.805018273 2.772445829 3.704060401 2.51670979 2.152171384 1.958004916 2.905877884 1.68416432 1 11.18628045 -6.617990069 3.797572886 2.060484476 2.916234347 0.405967626 0.545055459 0.260054448 7.194346363 0.183293366 0.183706093 2.41E-07 6.617990069 0.855749871 KLGAGEGGEASVS(ph)PEKTSTTSK ddPTM_A459_MK2206_30min_R2 2 KLGAGEGGEASVSPEKTSTTSK 22 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLGAGEGGEAS(0.006)VS(0.375)PEKT(0.112)S(0.112)T(0.144)T(0.187)S(0.063)K;KLGAGEGGEAS(0.239)VS(0.686)PEKT(0.013)S(0.013)T(0.017)T(0.021)S(0.01)K 46.504 0.030876 165868000 178734 375150 315281 343557 450690 267928 431930 264306 351130 284975 TRUE FALSE 192418.0125 356520.5965 325792.3112 315487.2941 432993.6461 278124.1878 375217.0722 298851.7017 381670.6527 275676.2891 0.697985355 1.29325811 1.181793009 1.144412148 1.570659731 1.008879613 1.361078508 1.084067486 1.384488503 1 18.07261566 -4.75746516 24.99759495 1.232400075 0.697984581 0.459397096 0.171490256 97.82630371 615236.4159 0.039049212 0.289538452 1.75E-05 4.75746516 -0.534415494 KLGDVS(ph)PTQIDVSQFGSFK ddPTM_A459_MK2206_30min_R1 1 KLGDVSPTQIDVSQFGSFK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.714)PT(0.286)QIDVSQFGSFK 109.68 0.00035267 3340200 778.58 803.62 736.6 765.76 994.81 598.98 646.06 727.21 692.61 707.68 TRUE FALSE 712.3576825 751.3041919 686.6016443 824.7389679 955.1846112 632.89373 602.9625162 720.8520796 764.609288 795.3527411 0.89565 0.944617593 0.863266836 1.036947414 1.200957213 0.795739673 0.758107045 0.906330037 0.961346141 1 9.635451031 KLGDVS(ph)PTQIDVSQFGSFK ddPTM_A459_MK2206_30min_R2 2 KLGDVSPTQIDVSQFGSFK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.808)PT(0.192)QIDVSQFGSFK;KLGDVS(0.9)PT(0.1)QIDVSQFGSFK 71.905 0.0069947 1306013600 150624 207467 196528 196159 208713 176838 222589 170285 173434 170615 TRUE FALSE 162155.8893 197164.4905 203080.1454 180132.1822 200517.8789 183567.694 193362.7969 192541.8342 188518.9758 165047.8465 0.982478067 1.1945899 1.230431961 1.091393714 1.214907575 1.112208962 1.171556012 1.166581923 1.142208031 1 17.33252479 -10.59760521 8.422347032 0.999999998 1.15002172 0.287782194 0.068116993 2.90E-09 3.32E-10 0.062589768 0.015180248 2.53E-11 10.59760521 0.150021722 KLGDVS(ph)PTQIDVSQFGSFKEDTK ddPTM_A459_MK2206_30min_R1 5 KLGDVSPTQIDVSQFGSFKEDTK 23 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.919)PT(0.081)QIDVSQFGSFKEDTK;KLGDVS(0.5)PT(0.5)QIDVSQFGSFKEDTK;KLGDVS(0.912)PT(0.088)QIDVSQFGSFKEDTK;KLGDVS(0.814)PT(0.186)QIDVSQFGSFKEDTK;KLGDVS(0.961)PT(0.039)QIDVSQFGSFKEDTK 80.172 0.00022848 1427717100 23133.9 25671.4 26398.9 28352.8 24972.3 17728.3 15611.9 26303.5 12663.2 7063.65 TRUE FALSE 21166.24032 24000.18719 24607.01622 30536.53757 23977.60041 18732.06103 14570.45864 26073.53127 13979.58496 7938.74829 2.666193656 3.023170192 3.099609072 3.846517921 3.020325061 2.359573618 1.835359695 3.284337823 1.760930621 1 12.95469584 -6.782126133 3.731852675 2.155936978 3.175336913 0.446668345 0.601439434 0.236656243 7.056169561 0.212463672 0.195540484 1.65E-07 6.782126133 1.019399935 KLGDVS(ph)PTQIDVSQFGSFKEDTK ddPTM_A459_MK2206_30min_R2 2 KLGDVSPTQIDVSQFGSFKEDTK 23 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.646)PT(0.354)QIDVSQFGSFKEDTK;KLGDVS(0.5)PT(0.5)QIDVSQFGSFKEDTK 108.69 2.00E-05 14374100 29881 89307 68394 69996 103924 65261 84288 49608 87805 55198 TRUE FALSE 32168.71233 84872.14424 70674.22182 64277.10289 99843.42158 67744.55309 73220.88435 56091.93593 95442.12018 53396.89378 0.602445387 1.589458454 1.32356429 1.203761087 1.869835762 1.268698388 1.371257374 1.05047189 1.787409593 1 15.7044682 -4.752445745 24.99912966 1.390029981 0.602443874 0.423607504 0.2737712 328.8103038 913909.9066 0.064046316 0.762412418 1.77E-05 4.752445745 -0.787586107 KLGDVSPT(ph)QIDVSQFGSFK ddPTM_A459_MK2206_30min_R2 1 KLGDVSPTQIDVSQFGSFK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.375)PT(0.625)QIDVSQFGSFK 105.56 0.0010715 1098700000 196290 243210 221600 211830 263470 205150 251690 185970 198940 209150 TRUE FALSE 211318.1133 231132.5451 228988.0334 194522.8114 253124.844 212957.127 218642.8007 210276.9175 216243.4416 202325.4526 1.044446512 1.142379973 1.131780655 0.961435197 1.251077611 1.05254739 1.080649013 1.039300369 1.068790104 1 17.6263183 -8.2466164 0.772257829 1.005396233 1.101094861 0.140059663 0.071843672 1.198096372 1.559377138 0.066447551 0.026356738 5.67E-09 8.2466164 0.095698627 KLGDVSPT(ph)QIDVSQFGSFKEDTK ddPTM_A459_MK2206_30min_R2 1 KLGDVSPTQIDVSQFGSFKEDTK 23 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.147)PT(0.853)QIDVSQFGSFKEDTK 119.18 3.47E-05 16326000 15771 45359 30197 35130 50041 28920 39230 21712 45969 23289 TRUE FALSE 16978.43989 43106.53802 31203.75291 32259.76662 48076.1389 30020.57087 34079.05388 24549.83295 49967.30053 22529.08184 0.753623251 1.91337305 1.385043258 1.431916616 2.133959087 1.33252527 1.512669452 1.089695227 2.217902216 1 14.4595009 -11.13807193 6.625380607 0.998496962 1.532685419 0.120140896 0.430298804 0.008908536 0.000517412 0.388508105 0.094011476 7.28E-12 11.13807193 0.534188457 KLGPGRPLPTFPT(ph)SECTSDVEPDTR ddPTM_A459_MK2206_30min_R1 1 KLGPGRPLPTFPTSECTSDVEPDTR 25 2 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 KLGPGRPLPT(0.001)FPT(0.25)S(0.25)ECT(0.25)S(0.25)DVEPDTR 61.16 0.019492 25022000 1084.9 986.19 934.07 1185.8 1394.1 1043.2 974.52 1198.7 702.38 516.72 TRUE FALSE 992.623558 921.9888518 870.6679309 1277.130521 1338.570045 1102.265082 909.5115489 1188.219892 775.3949145 580.7351746 1.709253376 1.587623571 1.49925124 2.199161644 2.304957756 1.898051178 1.566138213 2.046061517 1.335195367 1 9.181736609 -8.469117802 3.955269569 1.003434477 1.847828079 0.545180386 0.258219091 0.161313986 5.279066061 0.273051911 0.071688451 3.40E-09 8.469117802 0.844393602 KLGPGRPLPTFPTSECT(ph)SDVEPDTR ddPTM_A459_MK2206_30min_R2 1 KLGPGRPLPTFPTSECTSDVEPDTR 25 2 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 KLGPGRPLPTFPTSECT(0.563)S(0.432)DVEPDT(0.004)R 74.516 0.000422 19432000 19182 41598 32097 40821 47005 49718 43031 25996 47827 33835 TRUE FALSE 20650.58867 39532.30381 33167.09796 37485.79372 45159.34752 51610.05333 37380.97801 29393.76646 51986.90601 32730.96672 0.630918996 1.207795179 1.013324728 1.145269984 1.379713221 1.576795876 1.142067643 0.8980415 1.588309519 1 14.99836859 -4.467126745 1.464003674 1.237414358 3.59E-38 0.369924026 0.225058964 3.0111352 3.29096311 0.064412425 6.785820669 3.41E-05 4.467126745 -1.237414358 KLGPGRPLPTFPTSECTS(ph)DVEPDTR ddPTM_A459_MK2206_30min_R1 1 KLGPGRPLPTFPTSECTSDVEPDTR 25 2 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 KLGPGRPLPTFPTSECT(0.233)S(0.713)DVEPDT(0.055)R 97.304 2.43E-06 59251000 4106.1 4502.8 4147 4424.2 5199.6 4047.2 3343.9 4236.4 2776.9 1855 TRUE FALSE 3756.854633 4209.666902 3865.513194 4764.952651 4992.488922 4276.348966 3120.834532 4199.361601 3065.568692 2084.811405 1.802011743 2.019207537 1.854130875 2.28555573 2.394695708 2.051192236 1.496938536 2.0142645 1.47042974 1 11.02570117 -8.53560567 0.782159987 0.998473335 2.058153981 0.659632409 0.231518764 0.462911627 0.635211014 0.238842973 0.088830952 2.91E-09 8.53560567 1.059680646 KLGPGRPLPTFPTSECTS(ph)DVEPDTR ddPTM_A459_MK2206_30min_R2 1 KLGPGRPLPTFPTSECTSDVEPDTR 25 2 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 KLGPGRPLPTFPTSECT(0.215)S(0.781)DVEPDT(0.003)R 83.332 5.09E-05 19259000 29082 59849 43284 65219 65079 63023 62202 44354 58525 40799 TRUE FALSE 31308.54028 56876.98569 44727.06696 59890.39907 62523.67146 65421.38443 54034.80268 50151.22009 63615.39871 39467.73197 0.793269304 1.441100941 1.13325658 1.51745226 1.584171888 1.657591687 1.369088113 1.270689183 1.611833149 1 15.268386 -4.464516148 1.960415675 1.424643776 3.17E-13 0.42246203 0.206584437 2.362728326 4.365411697 0.053989416 8.257956229 3.43E-05 4.464516148 -1.424643776 KLIS(ph)S(ph)DY(ph)Y(ph)IWNSK ddPTM_A459_MK2206_30min_R1 1 KLISSDYYIWNSK 13 1 H0YIY0;E7EQ45;Q9H0R1 H0YIY0 AP5M1 AP-5 complex subunit mu-1 4 KLIS(1)S(1)DY(0.843)Y(0.843)IWNS(0.314)K 63.966 0.021683 6091500 1773.9 1916.8 2337.2 2092.1 2007.6 1635.5 1896.9 1668.7 1739.8 1746.7 TRUE FALSE 1623.02049 1792.015972 2178.557376 2253.233904 1927.633041 1728.100597 1770.361262 1654.110732 1920.658436 1963.094383 0.826766407 0.912852682 1.109756818 1.147797031 0.981935997 0.880294199 0.901821776 0.842603772 0.978383135 1 10.93891382 -6.625766977 5.904898767 0.910240587 1.008423284 0.129521272 0.094952977 0.392515316 19.39935886 0.034336554 0.034274868 2.37E-07 6.625766977 0.098182697 KLLAS(ph)LVK ddPTM_A459_MK2206_30min_R2 1 KLLASLVK 8 1 Q13263-2;Q13263;M0R3C0 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 KLLAS(1)LVK 77.062 0.047347 0 10037 12695 8989.4 11787 14984 10023 12095 9529.3 10755 11951 TRUE FALSE 10805.44044 12064.58476 9289.102109 10823.9644 14395.65287 10404.43229 10506.91197 10774.81223 11690.45046 11561.03985 0.934642608 1.04355533 0.803483271 0.936244883 1.245186684 0.899956442 0.908820669 0.931993347 1.011193683 1 13.49698355 -4.394654093 10.91640955 0.971919975 0.000345946 0.011199395 0.110695669 527870.0849 904666.344 0.0281153 12147959.79 4.03E-05 4.394654093 -0.97157403 KLLLDPSS(ph)PPTK ddPTM_A459_MK2206_30min_R2 2 KLLLDPSSPPTK 12 1 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 KLLLDPS(0.342)S(0.581)PPT(0.077)K;KLLLDPS(0.065)S(0.874)PPT(0.062)K 71.286 0.031164 21241900 352150 228020 260480 246230 277890 302790 384270 197913 288130 330340 TRUE FALSE 379110.8748 216696.8584 269164.2732 226112.2213 266978.6423 314312.8856 333814.8874 223780.9086 313191.0266 319561.0329 1.186348884 0.678107892 0.842293789 0.707571318 0.83545431 0.983577011 1.044604483 0.700275959 0.980066386 1 18.28573197 -6.729975056 18.75191417 0.929402569 0.832070816 0.071941804 0.155270665 36.03155575 21471.49898 0.050158304 0.050130544 1.86E-07 6.729975056 -0.097331753 KLNLTLS(ph)PAK ddPTM_A459_MK2206_30min_R1 1 KLNLTLSPAK 10 1 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 KLNLT(0.023)LS(0.977)PAK 75.483 0.030723 15132000 6218 7136.4 6124.8 5338.7 4618.2 4048.6 4215.1 5151.3 5008.9 3757 TRUE FALSE 5689.126448 6671.819063 5709.065641 5749.887599 4434.247315 4277.828233 3933.91837 5106.262727 5529.59308 4222.445524 1.347353427 1.580084107 1.352075618 1.361743465 1.050160929 1.013116264 0.931668235 1.209314057 1.309571207 1 12.04386309 -6.141794811 3.210224795 1.084174833 1.434905637 0.64462398 0.118409053 0.172271187 3.350066489 0.039031983 0.052410483 7.21E-07 6.141794811 0.350730804 KLNLTLS(ph)PAK ddPTM_A459_MK2206_30min_R2 1 KLNLTLSPAK 10 1 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 KLNLT(0.025)LS(0.975)PAK 65.565 0.045347 14064000 139180 132210 131520 122640 123790 93285 163840 100100 110660 128500 TRUE FALSE 149835.7278 125644.6437 135904.8112 112619.9197 118929.3826 96835.02604 142327.6112 113183.4137 120285.0068 124307.0555 1.205367846 1.010760356 1.093299255 0.905981718 0.956738796 0.778998631 1.144968084 0.910514799 0.967644244 1 16.92354866 -3.70053807 0.846817893 0.954325731 2.401800272 0.371921554 0.093956578 13.04963737 1.805236352 0.031926882 26.99620211 0.000199279 3.70053807 1.447474541 KLNSSSSSSSNSSNEREDFDSTSS(ph)SSSTPPLQPR ddPTM_A459_MK2206_30min_R1 1 KLNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR 34 2 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 KLNSSSSSSS(0.001)NS(0.043)S(0.043)NEREDFDS(0.043)T(0.043)S(0.043)S(0.157)S(0.157)S(0.157)S(0.157)T(0.157)PPLQPR 47.73 0.0056321 5401800 405.51 366.91 408.58 361.27 381.91 377.59 227.01 169.81 214.04 231.35 TRUE FALSE 371.0192451 343.0240923 380.846728 389.095078 366.697716 398.9688195 211.8665771 168.3253691 236.2902239 260.0113846 1.426934615 1.319265665 1.464730971 1.496454006 1.410314077 1.534428272 0.814835771 0.647376919 0.908768761 1 8.022430983 -7.266898529 24.99226962 0.813360062 1.438506712 0.895766888 0.099941785 126.9698797 581271.6606 0.04014594 0.027945745 5.41E-08 7.266898529 0.62514665 KLNSSSSSSSNSSNEREDFDSTSS(ph)SSSTPPLQPR ddPTM_A459_MK2206_30min_R2 1 KLNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR 34 2 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 KLNSSSSSSSNS(0.001)S(0.001)NEREDFDS(0.017)T(0.017)S(0.054)S(0.182)S(0.182)S(0.182)S(0.182)T(0.182)PPLQPR 49.095 0.0044782 13267000 8325.7 12748 7538 11198 15304 13824 14528 7887.6 10446 10473 TRUE FALSE 8963.121993 12114.95286 7789.313158 10283.08758 14703.08806 14350.08201 12620.45615 8918.536402 11354.5742 10131.26687 0.884699032 1.195798415 0.768839007 1.014985363 1.451258589 1.41641536 1.245693783 0.880298241 1.120745741 1 13.30652697 -4.751017243 24.39756814 1.126862305 0.884698342 0.105587407 0.206293355 858.2816953 2008998.18 0.056438914 0.75839819 1.77E-05 4.751017243 -0.242163963 KLNSSSSSSSNSSNEREDFDSTSSS(ph)SSTPPLQPR ddPTM_A459_MK2206_30min_R2 1 KLNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR 34 2 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 KLNSSSSSSSNSSNEREDFDS(0.006)T(0.017)S(0.017)S(0.059)S(0.225)S(0.225)S(0.225)T(0.225)PPLQPR 51.783 0.0022051 4992500 7513.6 11341 8743.3 9970.8 11542 12456 14488 8555.7 10954 10986 TRUE FALSE 8088.846993 10777.82243 9034.797258 9156.153745 11088.80309 12930.02181 12585.7082 9673.959366 11906.75912 10627.52772 0.761122173 1.01414202 0.850131611 0.861550681 1.043403826 1.216653783 1.184255504 0.910273736 1.120369613 1 13.3755184 -6.345531558 4.543265509 1.090354397 0.88040603 0.508524722 0.100144802 0.196666444 7.271240469 0.032191201 0.036942272 4.51E-07 6.345531558 -0.209948367 KLNSSSSSSSNSSNEREDFDSTSSSSS(ph)TPPLQPR ddPTM_A459_MK2206_30min_R1 1 KLNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR 34 2 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 KLNSSSSSSSNS(0.001)S(0.002)NEREDFDS(0.006)T(0.006)S(0.015)S(0.015)S(0.043)S(0.126)S(0.393)T(0.393)PPLQPR 52.577 0.0015333 7657200 583.09 422.33 495.3 480.79 537.18 371.15 492.69 464.57 348.17 253.26 TRUE FALSE 533.4951336 394.8362402 461.680416 517.8205291 515.7829831 392.1641923 459.8235491 460.5083135 384.3635174 284.6357608 1.874308176 1.387163156 1.622004258 1.819239184 1.812080751 1.377775551 1.615480598 1.617886355 1.350369737 1 8.152973119 -8.775921081 0.797286191 0.992895944 1.657125742 0.617916309 0.158668589 0.69603004 0.880837057 0.15946798 0.056239229 1.68E-09 8.775921081 0.664229797 KLNVTEQEK ddPTM_A459_MK2206_30min_R1 1 KLNVTEQEK 9 1 P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879;A0A2R8Y6I8 P06733 ENO1 Alpha-enolase;Enolase 0 89.561 0.040193 35686000 3448.5 3902.4 4325.2 3222.4 2812.5 2766.8 3399.5 3008 1462.8 3131.5 FALSE TRUE 3155.186966 3648.353051 4031.617475 3470.589806 2700.472169 2923.453825 3172.725558 2981.701373 1614.863295 3519.453862 0.896499028 1.03662477 1.145523605 0.986116012 0.767298642 0.830655533 0.901482356 0.8472057 0.458839172 1 11.78113586 -6.176971513 4.734327158 0.799912962 1.03201932 0.35496796 0.142435126 0.248950295 9.827942662 0.042558232 0.055391478 6.65E-07 6.176971513 0.232106358 KLNVTEQEK ddPTM_A459_MK2206_30min_R2 2 KLNVTEQEK 9 1 P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879;A0A2R8Y6I8 P06733 ENO1 Alpha-enolase;Enolase 0 ; 110.54 0.014602 78695000 337470 377680 330050 316100 320480 262070 350310 314390 276730 335630 FALSE TRUE 363306.9627 358924.9604 341053.7023 290273.6188 307896.3449 272043.2575 304313.8762 355481.8525 300799.4752 324678.4206 1.118974775 1.105478337 1.050435387 0.894034221 0.9483117 0.837885243 0.937277801 1.094873666 0.926453549 1 18.30865198 -5.570880875 4.414340213 0.947573926 1.106316438 0.52929306 0.063478553 0.164811763 6.890684999 0.018663111 0.034595214 2.69E-06 5.570880875 0.158742512 KLPPPPGS(ph)PLGHSPTASPPPTAR ddPTM_A459_MK2206_30min_R2 1 KLPPPPGSPLGHSPTASPPPTAR 23 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 KLPPPPGS(0.789)PLGHS(0.147)PT(0.053)AS(0.01)PPPTAR 104.65 1.15E-05 4551900 16891 17815 16052 18953 20504 17708 16643 11627 15412 14892 TRUE FALSE 18184.18795 16930.33301 16587.16567 17404.47927 19698.90994 18381.89035 14457.75411 13146.68882 16752.5079 14406.07526 1.262258292 1.175221752 1.151400737 1.20813469 1.367402959 1.275981835 1.003587295 0.912579491 1.162877994 1 13.81438973 -7.266061365 24.92980033 1.012476138 1.237425499 0.64504005 0.079974775 253.3211086 1366341.145 0.034303993 0.024005999 5.42E-08 7.266061365 0.224949361 KLPS(ph)DSGDLEALEGK ddPTM_A459_MK2206_30min_R1 2 KLPSDSGDLEALEGK 15 1 G3V5V3;O60524-4;O60524-5;O60524-3;O60524;O60524-2 G3V5V3 NEMF Nuclear export mediator factor NEMF 1 KLPS(0.962)DS(0.038)GDLEALEGK;KLPS(0.827)DS(0.173)GDLEALEGK 135.81 0.00020957 11690600 11519.1 13647.9 13303.4 11387.4 8590.1 8955.3 8742.7 8004.8 12015.1 9862.9 TRUE FALSE 10539.34006 12759.41923 12400.40227 12264.45952 8247.938127 9462.341347 8159.490435 7934.814878 13264.11264 11084.79051 0.950792894 1.151074458 1.118686209 1.10642231 0.744077041 0.853632853 0.736097847 0.715829033 1.196604719 1 13.43629389 -6.247206441 24.69824081 0.852214211 1.0893349 0.324334835 0.144355188 719.5175953 1248569.236 0.041954282 0.053896243 5.66E-07 6.247206441 0.237120688 KLPS(ph)DSGDLEALEGK ddPTM_A459_MK2206_30min_R2 2 KLPSDSGDLEALEGK 15 1 G3V5V3;O60524-4;O60524-5;O60524-3;O60524;O60524-2 G3V5V3 NEMF Nuclear export mediator factor NEMF 1 KLPS(0.994)DS(0.006)GDLEALEGK;KLPS(0.995)DS(0.005)GDLEALEGK 109.5 0.0019159 7411000 68944 56661 57748 51341 43054 31578 58575 45973 33541 56202 TRUE FALSE 74222.40565 53847.29713 59673.2895 47146.27607 41363.48363 32779.72292 50884.03214 51981.82895 36458.33555 54368.13334 1.365182159 0.990420193 1.097578413 0.867167459 0.760803822 0.602921618 0.935916483 0.956108399 0.670582809 1 15.73047368 -4.251920204 0.770538291 0.818058519 2.162948871 0.584296263 0.134210725 3.960386237 1.011288116 0.052088043 5.542843119 5.60E-05 4.251920204 1.344890352 KLS(ph)FLSWGTNK ddPTM_A459_MK2206_30min_R1 1 KLSFLSWGTNK 11 1 Q8IUC4-2;Q8IUC4;A8MT19 Q8IUC4-2 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 KLS(0.822)FLS(0.159)WGT(0.019)NK 80.719 0.022204 28402000 7298.8 8943.6 8969.1 8991.9 9030.5 8106.9 8680.7 8228.3 7276.1 7065.5 TRUE FALSE 6677.998732 8361.370014 8360.302481 9684.457696 8670.796063 8565.905672 8101.626342 8156.360841 8032.476633 7940.827482 0.840970132 1.052959535 1.052825099 1.219577899 1.091926009 1.078717009 1.020249635 1.027142431 1.011541511 1 12.95507364 -10.52887427 14.72156708 1 1.050915455 0.016507792 0.088341685 0 0 0.088656715 0.021502412 2.96E-11 10.52887427 0.050915455 KLS(ph)GDQITLPTTVDYSSVPK ddPTM_A459_MK2206_30min_R1 2 KLSGDQITLPTTVDYSSVPK 20 1 E9PJ38;E9PND3;E9PN10;O00559;O00559-2 E9PJ38 EBAG9 Receptor-binding cancer antigen expressed on SiSo cells 1 KLS(1)GDQITLPTTVDYSSVPK;KLS(1)GDQITLPTTVDYSSVPK 121.44 0.00012646 507760000 24328 25574 22802.5 21916.7 26656 21399.3 26239 26720 28144 25155.8 TRUE FALSE 22258.77585 23909.12795 21254.72983 23604.72803 25594.23507 22610.90987 24488.64419 26486.38986 31069.66951 28272.29042 0.787300057 0.845673541 0.751786626 0.834906818 0.905276322 0.79975515 0.866171216 0.936832123 1.098944198 1 14.78710114 -7.914708018 2.2884328 1.047913545 0.8244104 0.790644304 0.045985538 0.134308844 1.346334725 0.034588829 0.012793843 1.22E-08 7.914708018 -0.223503145 KLS(ph)GDQITLPTTVDYSSVPK ddPTM_A459_MK2206_30min_R2 2 KLSGDQITLPTTVDYSSVPK 20 1 E9PJ38;E9PND3;E9PN10;O00559;O00559-2 E9PJ38 EBAG9 Receptor-binding cancer antigen expressed on SiSo cells 1 KLS(1)GDQITLPTTVDYSSVPK;KLS(1)GDQITLPTTVDYSSVPK 122.84 0.00012352 302910000 166200 145448 154270 143220 148155 139064 205193 120513 151083 175024 TRUE FALSE 178924.3998 138225.2638 159413.2848 131518.4679 142337.6903 144356.178 178250.9126 136264.4629 164223.9262 169312.9812 1.056767169 0.81638905 0.941530198 0.776777226 0.840677952 0.852599588 1.052789404 0.804808125 0.969942913 1 17.36933306 KLS(ph)GDQPAAR ddPTM_A459_MK2206_30min_R1 1 KLSGDQPAAR 10 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLS(1)GDQPAAR 96.23 0.039364 414340000 4799.9 5221.3 5483.6 5046.1 5187 4250.3 4852.3 5313.7 3120.5 4082.6 TRUE FALSE 4391.6433 4881.392421 5111.38851 5434.751496 4980.390806 4490.948313 4528.611921 5267.242881 3444.887142 4588.38331 0.95712215 1.0638589 1.113984636 1.18445891 1.085434775 0.978764852 0.986973323 1.1479518 0.750784516 1 12.1637702 -6.759117665 22.95490552 0.983021773 1.087604513 0.206899043 0.104464802 37.54775994 371237.8652 0.034888315 0.033270352 1.74E-07 6.759117665 0.10458274 KLS(ph)GDQPAAR ddPTM_A459_MK2206_30min_R2 3 KLSGDQPAAR 10 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR 108.68 0.018125 777704000 386826 498302 487850 527859 462810 400080 623837 463392 429939 498824 TRUE FALSE 416441.696 473557.0473 504114.6755 484731.2312 444637.754 415305.3247 541926.4525 523958.9255 467334.3171 482547.4137 0.863006793 0.981368947 1.044694596 1.004525602 0.921438477 0.860651851 1.123053273 1.085818534 0.968473364 1 18.88031118 -7.269153108 24.99214999 1.051487832 0.953594837 0.333180693 0.067368948 768.2732613 2489161.332 0.029460341 0.020273967 5.38E-08 7.269153108 -0.097892996 KLS(ph)LGQYDNDAGGQLPFSK ddPTM_A459_MK2206_30min_R1 2 KLSLGQYDNDAGGQLPFSK 19 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 KLS(0.889)LGQY(0.111)DNDAGGQLPFSK;KLS(0.862)LGQY(0.138)DNDAGGQLPFSK 101.28 0.00061388 835640000 27492 25132 26208 21332 22082 16243.3 18423.2 21333 17083.8 16048.1 TRUE FALSE 25153.66103 23495.90223 24429.07398 22974.99434 21202.42718 17162.98161 17194.22194 21146.48783 18859.72214 18036.25978 1.394616253 1.302703693 1.354442344 1.273822545 1.175544566 0.95158208 0.953314165 1.172443072 1.045655938 1 14.13861257 -6.380196881 2.296767605 1.032066033 1.339602713 0.828014948 0.065747349 0.130374573 1.349109342 0.023875848 0.028156855 4.17E-07 6.380196881 0.30753668 KLS(ph)LGQYDNDAGGQLPFSK ddPTM_A459_MK2206_30min_R2 3 KLSLGQYDNDAGGQLPFSK 19 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 KLS(0.796)LGQY(0.204)DNDAGGQLPFSK;KLS(0.99)LGQY(0.01)DNDAGGQLPFSK;KLS(0.962)LGQY(0.038)DNDAGGQLPFSK 92.39 0.0011611 395330000 1076334 1283492 1144419 1173968 1031049 979559 921774 729177 896335 965461 TRUE FALSE 1158738.959 1219755.654 1182573.358 1078051.059 990564.8357 1016836.804 800743.9666 824482.9375 974296.5981 933958.0866 1.240675545 1.306006845 1.26619532 1.154282055 1.060609518 1.088739226 0.857366062 0.882783659 1.043190923 1 19.83299828 -6.3350431 1.073004946 0.944365636 1.285212856 0.811800165 0.063277185 0.206418532 0.499546286 0.02938201 0.041199202 4.62E-07 6.3350431 0.340847219 KLS(ph)NPDIFSSTGK ddPTM_A459_MK2206_30min_R1 2 KLSNPDIFSSTGK 13 1 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 KLS(0.989)NPDIFS(0.007)S(0.002)T(0.002)GK;KLS(0.996)NPDIFS(0.003)STGK 133.48 0.0037656 0 3020.7 2701.08 3008.9 2496.9 2460.71 2198.3 2890.6 2797.9 2833.76 2952.8 TRUE FALSE 2763.773603 2525.239201 2804.664251 2689.211671 2362.69471 2322.765846 2697.773348 2773.438255 3128.339493 3318.615157 0.832809311 0.760931618 0.845130911 0.810341526 0.711952004 0.699920219 0.812921421 0.835721566 0.942664137 1 11.69636562 -8.242733717 1.710800298 0.998602969 0.778193317 0.741824382 0.044858011 0.19154004 1.041435125 0.045708997 0.013725137 5.72E-09 8.242733717 -0.220409651 KLS(ph)NPDIFSSTGK ddPTM_A459_MK2206_30min_R2 2 KLSNPDIFSSTGK 13 1 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 KLS(1)NPDIFSSTGK;KLS(0.946)NPDIFS(0.048)S(0.004)T(0.002)GK 139.34 0.0016876 12227700 60357 70209 63632 66243 64003 58190 77624 56053 55300 73769 TRUE FALSE 64977.97833 66722.52315 65753.45912 60830.735 61489.92063 60404.46123 67431.87556 63379.31956 60109.89404 71361.92357 0.910541295 0.934987733 0.921408166 0.852425663 0.861662881 0.846452256 0.944927942 0.88813917 0.842324464 1 16.12286688 -10.50322873 4.70177149 1.000001328 0.889959192 0.462432782 0.035828026 8961555.358 20019105.23 88.41126602 0.009235734 3.14E-11 10.50322873 -0.110042136 KLS(ph)SSDAPAQDTGSSAAAVETDASR ddPTM_A459_MK2206_30min_R1 4 KLSSSDAPAQDTGSSAAAVETDASR 25 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;Q7Z4S6-3;H0YHT2;H0YIM6 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 KLS(0.333)S(0.333)S(0.333)DAPAQDTGSSAAAVETDASR;KLS(0.602)S(0.199)S(0.199)DAPAQDTGSSAAAVETDASR;KLS(0.733)S(0.036)S(0.231)DAPAQDTGSSAAAVETDASR;KLS(0.333)S(0.333)S(0.333)DAPAQDTGSSAAAVETDASR 191.9 4.20E-27 220336000 17870.6 17864.5 16437 13153.5 13257.6 9974.7 9180.4 9127.4 7746 6979.42 TRUE FALSE 16350.61163 16701.5178 15321.30224 14166.58485 12729.52172 10539.45889 8567.992267 9047.600104 8551.224419 7844.083242 2.08445157 2.129186712 1.95323045 1.806021738 1.622818286 1.343618951 1.09228727 1.153429894 1.090149627 1 12.93738913 -6.495022789 0.812618644 1.03895636 2.136788896 0.988730868 0.044696799 0.061289554 0.089579027 0.027536972 0.035323988 3.20E-07 6.495022789 1.097832536 up KLS(ph)SSDAPAQDTGSSAAAVETDASR ddPTM_A459_MK2206_30min_R2 3 KLSSSDAPAQDTGSSAAAVETDASR 25 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;Q7Z4S6-3;H0YHT2;H0YIM6 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 KLS(0.333)S(0.333)S(0.333)DAPAQDTGSSAAAVETDASR;KLS(0.732)S(0.036)S(0.232)DAPAQDTGSSAAAVETDASR;KLS(0.734)S(0.133)S(0.133)DAPAQDTGSSAAAVETDASR 193.73 2.16E-27 429028000 304063 330767 333842 305000 229813 196025 200675 171944 147157 182567 TRUE FALSE 327342.2971 314341.5918 344972.1257 280080.5244 220789.3869 203484.8687 174326.1314 194417.6712 159956.4499 176609.8537 1.853476973 1.779864402 1.953300557 1.585871447 1.250153274 1.152171662 0.987069112 1.100831392 0.905705126 1 17.43020631 -6.279389185 1.466294057 1.017181877 1.86861603 0.960692869 0.074715928 0.069755165 0.300570627 0.027714639 0.037668944 5.26E-07 6.279389185 0.851434153 KLSFLS(ph)WGTNK ddPTM_A459_MK2206_30min_R1 2 KLSFLSWGTNK 11 1 Q8IUC4-2;Q8IUC4;A8MT19 Q8IUC4-2 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 KLS(0.098)FLS(0.902)WGTNK;KLS(0.123)FLS(0.865)WGT(0.012)NK 99.161 0.012467 49477000 9623 11810.6 10980.1 10296.4 10122 9236.7 9463.8 8857.3 7801.5 7020.4 TRUE FALSE 8804.513318 11041.72779 10234.8014 11089.43051 9718.819306 9759.673972 8832.48717 8779.86156 8612.493843 7890.140153 1.115888076 1.39943367 1.297163448 1.405479535 1.231767639 1.236945578 1.119433495 1.112763701 1.09155144 1 12.94583521 -7.295747099 1.05709627 1.051828339 1.309590441 0.617862828 0.079822483 0.34353176 0.74106762 0.056132282 0.031000766 5.06E-08 7.295747099 0.257762102 KLSFLS(ph)WGTNK ddPTM_A459_MK2206_30min_R2 2 KLSFLSWGTNK 11 1 Q8IUC4-2;Q8IUC4;A8MT19 Q8IUC4-2 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 KLS(0.059)FLS(0.941)WGTNK;KLS(0.382)FLS(0.618)WGTNK 98.582 0.0092947 17415300 61663 71312 68767 85244 69725 59213 75485 49540 57314 73336 TRUE FALSE 66383.96669 67770.74978 71059.65746 78279.29252 66987.24616 61466.39221 65573.72883 56015.0481 62299.06812 70943.05233 0.935735981 0.955283816 1.001643644 1.10341027 0.944239696 0.866418771 0.92431502 0.789577644 0.878156015 1 16.11437378 -6.546918393 5.801308741 0.882295276 0.999470465 0.377756998 0.064319011 0.171336947 18.04176701 0.021555818 0.022034559 2.84E-07 6.546918393 0.117175189 KLSLGQY(ph)DNDAGGQLPFSK ddPTM_A459_MK2206_30min_R2 1 KLSLGQYDNDAGGQLPFSK 19 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 KLS(0.037)LGQY(0.963)DNDAGGQLPFSK 105.79 0.0014447 4486800 10998 20503 18482 22433 32037 23538 26772 19780 19792 23544 TRUE FALSE 11840.01534 19484.85083 19098.18066 20600.15214 30779.06641 24433.75508 23256.80424 22365.31391 21513.47238 22775.76121 0.519851575 0.855508216 0.838530949 0.904476999 1.351395728 1.07279642 1.021120832 0.981978767 0.944577535 1 14.47521165 -4.592720554 0.914491087 1.049771178 0.116439074 0.625679103 0.12132705 2.029900579 1.060439491 0.044920563 2.050416699 2.55E-05 4.592720554 -0.933332104 KLSSERPS(ph)SDGEGVVENGITTCNGK ddPTM_A459_MK2206_30min_R2 1 KLSSERPSSDGEGVVENGITTCNGK 25 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 KLS(0.077)S(0.077)ERPS(0.598)S(0.249)DGEGVVENGITTCNGK 56.461 0.013271 21272000 26487 33753 29829 31161 48583 27835 39708 31412 35694 33022 TRUE FALSE 28514.86509 32076.8751 30823.48397 28615.04662 46675.38731 28894.28043 34494.2919 35517.65625 38798.5996 31944.49484 0.892637846 1.004144071 0.964907541 0.895773959 1.461140254 0.904515178 1.079819608 1.111855311 1.214562941 1 14.96327971 KLSSS(ph)DAPAQDTGSSAAAVETDASR ddPTM_A459_MK2206_30min_R1 1 KLSSSDAPAQDTGSSAAAVETDASR 25 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;Q7Z4S6-3;H0YHT2;H0YIM6 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 KLS(0.298)S(0.095)S(0.607)DAPAQDTGSSAAAVETDASR 188.73 7.74E-27 139020000 7405.8 8580.2 7354.1 5550.1 5891.4 3908.8 3632.8 3822.9 3554.5 2974.6 TRUE FALSE 6775.897821 8021.62742 6854.924182 5977.569664 5656.733063 4130.112878 3390.46254 3789.476788 3924.002995 3343.115905 2.026821089 2.399446399 2.050459624 1.788023459 1.692054127 1.235408223 1.014162427 1.133516425 1.173756192 1 11.70697766 -6.392098147 1.024976028 1.062431849 2.221181928 0.93545841 0.121302099 0.118445443 0.264829665 0.058133357 0.077734319 4.05E-07 6.392098147 1.158750079 up KLSSS(ph)DAPAQDTGSSAAAVETDASR ddPTM_A459_MK2206_30min_R2 1 KLSSSDAPAQDTGSSAAAVETDASR 25 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;Q7Z4S6-3;H0YHT2;H0YIM6 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 KLS(0.32)S(0.097)S(0.583)DAPAQDTGSSAAAVETDASR 162.73 1.19E-13 185610000 68272 78104 72726 70352 46910 42750 51920 38130 32123 40470 TRUE FALSE 73498.95681 74225.46893 75150.64854 64604.01656 45068.0777 44376.88121 45102.84163 43113.72192 34917.00047 39149.46721 1.877393539 1.895950934 1.919582919 1.650188908 1.151179847 1.133524524 1.152067827 1.10125948 0.891889544 1 15.25670505 -6.170074346 2.122454031 1.065581216 1.903466797 0.966199804 0.071277555 0.054895204 0.485739711 0.024706534 0.034089452 6.76E-07 6.170074346 0.837885582 KLSVPTS(ph)DEEDEVPAPK ddPTM_A459_MK2206_30min_R2 1 KLSVPTSDEEDEVPAPK 17 1 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KLS(0.002)VPT(0.022)S(0.976)DEEDEVPAPK 120.63 0.00074911 6126600 68001 46703 49711 53101 42019 39015 77006 62015 32448 55789 TRUE FALSE 73207.20884 44383.79693 51368.33993 48762.47844 40369.12293 40499.74316 66895.0197 70120.57343 35270.26839 53968.6095 1.356477581 0.822400231 0.951818852 0.903534089 0.748011174 0.750431474 1.239517199 1.299284419 0.653533021 1 15.7198329 -9.383232149 15.91909938 1.000000034 0.967353575 0.001441816 0.235508804 0 0 0.229481784 0.055657508 4.14E-10 9.383232149 -0.032646458 KLSVPTS(ph)DEEDEVPAPKPR ddPTM_A459_MK2206_30min_R1 1 KLSVPTSDEEDEVPAPKPR 19 2 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KLS(0.001)VPT(0.158)S(0.841)DEEDEVPAPKPR 99.371 0.00053578 58111000 4412.6 4409.4 4411.3 4458.4 4434.9 3770.4 2945.3 3563.5 3201.9 2614.7 TRUE FALSE 4037.285199 4122.347259 4111.873247 4801.786741 4258.248542 3983.87679 2748.824411 3532.344695 3534.748963 2938.628776 1.373867033 1.402813207 1.399248956 1.634022909 1.449059703 1.355692431 0.935410567 1.202038421 1.202856581 1 11.52092741 -7.074834685 5.194751713 1.103122063 1.452183065 0.744117227 0.10174039 0.120897335 5.902472624 0.040714954 0.031699609 8.42E-08 7.074834685 0.349061003 KLSVPTS(ph)DEEDEVPAPKPR ddPTM_A459_MK2206_30min_R2 4 KLSVPTSDEEDEVPAPKPR 19 2 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KLSVPT(0.053)S(0.946)DEEDEVPAPKPR;KLSVPT(0.198)S(0.802)DEEDEVPAPKPR;KLS(0.002)VPT(0.181)S(0.817)DEEDEVPAPKPR;KLS(0.001)VPT(0.167)S(0.832)DEEDEVPAPKPR 99.569 0.00052875 186364000 233017 306221 246779 287072 254325 229522 325522 272695 239546 253002 TRUE FALSE 250856.9607 291014.5104 255006.4887 263617.2993 244338.9226 238256.6205 282780.5704 308337.1728 260381.2781 244746.5655 1.024966214 1.189044307 1.041920601 1.077103161 0.998334429 0.973482999 1.155401588 1.259822266 1.063881234 1 17.90092909 -7.298910801 24.94771039 1.141428151 1.055498047 0.119022198 0.083450553 966.8718862 643719.8734 0.035022318 0.023612919 5.02E-08 7.298910801 -0.085930104 KLT(ph)ATPTPLGGMTGFHMQTEDR ddPTM_A459_MK2206_30min_R1 2 KLTATPTPLGGMTGFHMQTEDR 22 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 KLT(0.763)AT(0.236)PT(0.001)PLGGMTGFHMQTEDR;KLT(0.481)AT(0.481)PT(0.037)PLGGMTGFHMQTEDR 94.176 0.00013412 40195000 6176.8 5824.7 7012 6181.7 7444.9 6369.1 6564.2 7041.9 5064.4 4307.8 TRUE FALSE 5651.430724 5445.510971 6536.044977 6657.815605 7148.353868 6729.712938 6126.314195 6980.333411 5590.862503 4841.482786 1.167293363 1.12476099 1.350008926 1.375160441 1.476480282 1.390010713 1.265379733 1.441775943 1.154783101 1 12.24123325 -8.51405398 5.218825713 1.000253852 1.324487989 0.491848444 0.106124459 0.130146468 13.7141277 0.11231134 0.029187381 3.06E-09 8.51405398 0.324234137 KLT(ph)ATPTPLGGMTGFHMQTEDR ddPTM_A459_MK2206_30min_R2 2 KLTATPTPLGGMTGFHMQTEDR 22 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 KLT(0.49)AT(0.49)PT(0.019)PLGGMTGFHMQTEDR;KLT(0.501)AT(0.475)PT(0.024)PLGGMTGFHMQTEDR 83.467 0.0004335 17944000 100504 127034 126961 138167 139042 136165 142627 105074 133219 122953 TRUE FALSE 108198.6635 120725.6763 131193.8164 126878.3141 133582.5125 141346.8545 123899.9036 118807.5326 144806.1478 118941.0537 0.909683076 1.015004261 1.103015421 1.066732723 1.123098445 1.188377353 1.041691659 0.998877418 1.217461451 1 16.85988724 -4.856129166 1.965166059 1.094898001 0.870271078 0.409103904 0.068338055 0.627254191 3.001879171 0.018221569 0.245415335 1.39E-05 4.856129166 -0.224626923 KLT(ph)SDEEGEPSGKR ddPTM_A459_MK2206_30min_R1 1 KLTSDEEGEPSGKR 14 2 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 KLT(0.582)S(0.418)DEEGEPSGKR 104.61 0.019835 26498000 4631.4 5502.7 4954.9 4884.4 5241 4210.9 4553 5708.2 4421 2835.4 TRUE FALSE 4237.47511 5144.47323 4618.575193 5260.597334 5032.239872 4449.317519 4249.277677 5658.293809 4880.578771 3186.670758 1.329749896 1.614372372 1.449341819 1.650812944 1.579152744 1.396227554 1.333453626 1.775612932 1.531560409 1 11.63783425 -12.88071481 14.53854627 1.486707921 1.493884079 0 0.208644614 0 0 0 0.044585408 1.32E-13 12.88071481 0.007176159 KLTS(ph)DEEGEPSGK ddPTM_A459_MK2206_30min_R1 3 KLTSDEEGEPSGK 13 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 KLT(0.016)S(0.984)DEEGEPSGK;KLT(0.093)S(0.907)DEEGEPSGK;KLT(0.011)S(0.989)DEEGEPS(0.001)GK 219.41 2.55E-08 106204000 13237.7 14596.5 14516 11249.5 9997.7 8205.2 11534.2 11177.8 12601.9 11631.9 TRUE FALSE 12111.7641 13646.2652 13530.69436 12115.93844 9599.470439 8669.771333 10764.77456 11080.07367 13911.9126 13072.94759 0.926475381 1.043855267 1.03501481 0.926794692 0.734300384 0.663184127 0.823438975 0.847557416 1.064175658 1 13.67429685 -6.00737903 6.191936634 0.835768607 1.002940714 0.242095677 0.113183702 0.196103364 32.64060117 0.034503699 0.048232898 9.83E-07 6.00737903 0.167172107 KLTS(ph)DEEGEPSGK ddPTM_A459_MK2206_30min_R2 5 KLTSDEEGEPSGK 13 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 KLT(0.082)S(0.918)DEEGEPSGK;KLT(0.061)S(0.938)DEEGEPSGK;KLT(0.009)S(0.991)DEEGEPSGK;KLT(0.069)S(0.931)DEEGEPSGK;KLT(0.086)S(0.896)DEEGEPS(0.018)GK 170.78 0.00039307 113188700 195747 209441 193350 184398 194373 134427 245117 167738 142827 211895 TRUE FALSE 210733.5408 199040.4645 199796.1925 169332.0935 186740.9394 139542.7137 212932.8435 189661.9325 155249.8343 204980.8835 1.02806436 0.971019644 0.974706466 0.826087246 0.911016365 0.680759646 1.038793666 0.925266441 0.757386892 1 17.64512984 -5.654541677 6.078851249 0.874141872 0.992735695 0.212614438 0.101032027 0.324784579 16.24691996 0.027110276 0.047347883 2.22E-06 5.654541677 0.118593823 KLTSDEEGEPS(ph)GK ddPTM_A459_MK2206_30min_R2 1 KLTSDEEGEPSGK 13 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 KLT(0.001)S(0.316)DEEGEPS(0.683)GK 141.73 0.0014604 18226000 40191 42667 31878 40623 33414 28333 48735 32720 26509 47107 TRUE FALSE 43268.05386 40548.21882 32940.79661 37303.97095 32101.99847 29411.23217 42336.03596 36996.61634 28814.7049 45569.90245 0.949487524 0.889802625 0.722863005 0.818609849 0.70445616 0.645409154 0.929035036 0.811865164 0.632318775 1 15.47579366 -5.082765874 4.362530764 0.77545241 0.938644226 0.200725406 0.110787932 0.3019483 10.16716762 0.027584938 0.086017071 8.26E-06 5.082765874 0.163191815 KLTVNGVCAST(ph)PPLTPIK ddPTM_A459_MK2206_30min_R1 1 KLTVNGVCASTPPLTPIK 18 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 KLTVNGVCAS(0.12)T(0.88)PPLTPIK 108.08 0.0019277 16860000 10404 9423.7 9670.9 8480.3 9826 8436.8 8231.1 8375.4 7617.4 7037.5 TRUE FALSE 9519.085166 8810.215417 9014.466253 9133.454175 9434.609613 8914.484325 7682.018337 8302.174761 8409.255989 7909.35863 1.203521753 1.113897577 1.139721522 1.154765462 1.192841298 1.127080556 0.971256798 1.049664726 1.063203274 1 12.949345 -7.107902134 5.431132461 1.025942926 1.157110375 0.795287073 0.033639082 0.106306606 4.472860483 0.013035018 0.010082499 7.80E-08 7.107902134 0.131167449 KLTVNGVCAST(ph)PPLTPIK ddPTM_A459_MK2206_30min_R2 2 KLTVNGVCASTPPLTPIK 18 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 KLTVNGVCAS(0.197)T(0.793)PPLT(0.01)PIK;KLTVNGVCAS(0.003)T(0.997)PPLTPIK 115.02 0.001338 25024300 197682 254540 222920 235120 259730 233390 237930 179865 207754 207739 TRUE FALSE 212816.6859 241899.9137 230352.0415 215909.9439 249531.6952 242271.82 206689.5052 203373.9731 225824.0674 200960.4934 1.058997628 1.203718749 1.146255354 1.074389997 1.241695275 1.205569392 1.028508149 1.012009722 1.123723691 1 17.61655239 -7.272354862 24.85831623 1.042061192 1.157179026 0.452129406 0.061472102 645.0560645 1469008.751 0.025612603 0.017449137 5.34E-08 7.272354862 0.115117833 KLVIIEGDLER ddPTM_A459_MK2206_30min_R1 1 KLVIIEGDLER 11 1 J3KN67;A0A2R2Y2Q3;A0A494C0P6;P06753;P06753-7;P06753-2;A0A087WWU8;P06753-5;P06753-3;P06753-6;P06753-4 J3KN67;P06753-2 TPM3 Tropomyosin alpha-3 chain 0 97.163 0.026401 14763000 5573.4 5496.8 5940.2 5577.1 6041.5 4738.4 5599.4 5055.8 4400.9 4644 FALSE TRUE 5099.353063 5138.957321 5536.995774 6006.649208 5800.854262 5006.684113 5225.874243 5011.597674 4858.389304 5219.33378 0.977012254 0.984600245 1.060862556 1.150845963 1.111416611 0.959257316 1.001253122 0.960198731 0.930844722 1 12.34964995 -6.779622011 24.99982488 0.96975707 1.058362317 0.409383076 0.052014741 283.5004626 389790.6217 0.020856596 0.018427747 1.66E-07 6.779622011 0.088605247 KLVIIESDLER ddPTM_A459_MK2206_30min_R1 2 KLVIIESDLER 11 1 P09493-3;P09493-9;A0A0S2Z4G6;P09493-4;P09493-10;P09493;Q6ZN40;P09493-2;H7BYY1;H0YKX5;P09493-8;P09493-7;P09493-5;H0YKJ4;F5H7S3;A0A494BZZ2;H0YK48;B7Z596;P09493-6;A0A494C0V8;H0YL42 P09493-3 TPM1 Tropomyosin alpha-1 chain 0 ; 100.38 0.022089 16664600 8730.2 9055.1 9417.2 8758.6 9729.6 8523.1 8894.1 8317.7 7054 6515.7 FALSE TRUE 7987.650646 8465.611344 8777.986702 9433.18889 9342.049429 9005.670556 8300.790817 8244.979226 7787.288543 7322.914107 1.090774865 1.156044058 1.198701306 1.288174182 1.275728391 1.22979328 1.133536553 1.125915053 1.063413885 1 12.83820216 -8.075699328 1.198544171 1.008698859 1.208310937 0.603918277 0.055456269 0.349823282 0.926560896 0.057784945 0.019611072 8.40E-09 8.075699328 0.199612078 KLYDIDVAK ddPTM_A459_MK2206_30min_R2 1 KLYDIDVAK 9 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 RPL23A 60S ribosomal protein L23a 0 113.93 0.01195 5111400 45905 56530 48432 45340 49940 44903 51876 44363 52429 49425 FALSE TRUE 49419.52209 53722.8024 50046.69871 41635.57696 47979.10467 46611.81513 45064.61889 50161.39642 56989.17965 47812.2663 1.033615972 1.12361966 1.046733455 0.870813709 1.003489447 0.974892402 0.942532584 1.049132373 1.191936381 1 15.54509317 -10.27419715 6.215235093 1 1.021220929 0.005351763 0.085139747 4.42E-10 1.04E-10 0.087129125 0.021131916 5.32E-11 10.27419715 0.021220929 KLYGDADYLEER ddPTM_A459_MK2206_30min_R1 1 KLYGDADYLEER 12 1 B4E1E0;P17812-2;P17812;A0A3B3IRI2 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 0 96.067 0.023623 3751500 3592.9 2566.3 2707.4 3164.6 3546.8 3692.3 3152.5 3008 2245.4 1928.6 FALSE TRUE 3287.304988 2399.233404 2523.629231 3408.33804 3405.523446 3901.354835 2942.202477 2981.701373 2478.817365 2167.529528 1.516613705 1.106897679 1.164288282 1.572452876 1.571154349 1.799908506 1.357399029 1.375622032 1.143614116 1 11.08183593 -8.344805944 1.954704663 1.002397752 1.440329876 0.380965414 0.190591205 0.384286505 2.880317784 0.201679802 0.057962813 4.52E-09 8.344805944 0.437932124 KMANS(ph)SPVLSK ddPTM_A459_MK2206_30min_R1 1 KMANSSPVLSK 11 1 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 KMANS(0.866)S(0.13)PVLS(0.004)K 123.01 0.0071593 15098000 4823.8 4471.9 3899.4 4351.9 4471.6 4170.3 4231.8 4091.8 3692.7 2545.4 TRUE FALSE 4413.510479 4180.778497 3634.719592 4687.084092 4293.486703 4406.418782 3949.504343 4056.025824 4076.569379 2860.743369 1.542784483 1.461430809 1.270550736 1.638414736 1.500829033 1.540305513 1.380586734 1.417822328 1.425003523 1 11.48217437 -9.804704871 0.562644417 0.948360424 1.482190522 0.6981601 0.092875012 4.035848248 1.231495875 0.538030291 0.041274533 1.57E-10 9.804704871 0.533830099 KMEES(ph)DEEAVQAK ddPTM_A459_MK2206_30min_R1 4 KMEESDEEAVQAK 13 1 I3VM54;Q9Y2K7-3;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2 I3VM54 KDM2A Lysine-specific demethylase 2A 1 KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK 178.14 0.00019018 24539900 5371.8 5928.1 6344.5 5421.27 5101.6 4414.49 4791 5449.1 5307.14 4497.06 TRUE FALSE 4914.900202 5542.179613 5913.853017 5838.817155 4898.392469 4664.434609 4471.401132 5401.459093 5858.836195 5054.189744 0.972440777 1.096551553 1.170089236 1.155242967 0.969174629 0.922884744 0.88469198 1.068709203 1.159203847 1 12.30326411 -6.270193278 24.47268897 0.994513954 1.103543886 0.232147535 0.086504038 730.5919752 2042464.29 0.029260559 0.033693565 5.37E-07 6.270193278 0.109029932 KMEES(ph)DEEAVQAK ddPTM_A459_MK2206_30min_R2 2 KMEESDEEAVQAK 13 1 I3VM54;Q9Y2K7-3;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2 I3VM54 KDM2A Lysine-specific demethylase 2A 1 KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK 149.44 0.0009325 8827100 45369 52414 47762 45393 46741 36417.6 56195 44347 37275.7 52688 TRUE FALSE 48842.48552 49811.19698 49354.36124 41684.24669 44905.71349 37803.49729 48816.529 50143.30517 40517.87301 50968.79487 0.958282134 0.977288105 0.968325058 0.817838577 0.881043266 0.741698865 0.957772871 0.983804018 0.794954503 1 15.63732662 -5.730449036 23.57640105 0.878985657 0.968897633 0.1984816 0.078532988 172.1154922 130937.0175 0.02134417 0.036961811 1.86E-06 5.730449036 0.089911977 KMEVEELS(ph)PLALGR ddPTM_A459_MK2206_30min_R2 2 KMEVEELSPLALGR 14 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 KMEVEELS(1)PLALGR;KMEVEELS(1)PLALGR 116.61 0.001348 6013400 15436.6 22729.2 21438.1 21788.5 20943.6 20390 24635 15631.4 14937.6 19426.6 TRUE FALSE 16618.43796 21600.50098 22152.83555 20008.30985 20121.24903 21165.95574 21400.39491 17674.47765 16236.84545 18792.71163 0.884302292 1.14940842 1.178799313 1.064684557 1.07069429 1.126285347 1.138760352 0.940496401 0.863996945 1 14.19788563 -7.808823343 7.669862611 0.925059554 1.093341991 0.415753117 0.082563358 0.214969376 29.23812779 0.044438036 0.02141067 1.55E-08 7.808823343 0.168282436 KMLGEDS(ph)DEEEEMDTSER ddPTM_A459_MK2206_30min_R1 2 KMLGEDSDEEEEMDTSER 18 1 A0A087X0M4;Q9BWU0;A0A087WWF4;H7C256 A0A087X0M4 SLC4A1AP Kanadaptin 1 KMLGEDS(0.999)DEEEEMDTSER;KMLGEDS(0.975)DEEEEMDT(0.01)S(0.015)ER 114.87 0.00055204 17616700 4748.2 5135.8 5731.9 4715.7 4346 4299.6 4565.5 5059.1 4549.5 3846.8 TRUE FALSE 4344.340656 4801.458487 5342.834598 5078.904031 4172.889617 4543.039636 4260.943825 5014.868822 5022.436806 4323.370626 1.004850389 1.110582206 1.235803048 1.174755641 0.96519359 1.050809664 0.985560618 1.159944232 1.161694715 1 12.0779408 -6.230958426 24.99150702 1.058296115 1.137454221 0.173197884 0.082344646 1349.148021 1106174.787 0.026037471 0.033609169 5.88E-07 6.230958426 0.079158106 KMLGEDS(ph)DEEEEMDTSER ddPTM_A459_MK2206_30min_R2 2 KMLGEDSDEEEEMDTSER 18 1 A0A087X0M4;Q9BWU0;A0A087WWF4;H7C256 A0A087X0M4 SLC4A1AP Kanadaptin 1 KMLGEDS(0.997)DEEEEMDT(0.002)S(0.001)ER;KMLGEDS(1)DEEEEMDTSER 113.78 0.00058579 53086000 125325 142180 131514 132884 131752 109384 159878 124347 106082 132618 TRUE FALSE 134919.9784 135119.5479 135898.6111 122026.9521 126578.7545 113546.6848 138885.8266 140599.5798 115308.8206 128290.6855 1.051674 1.053229604 1.059302244 0.951175462 0.986655843 0.88507349 1.082586986 1.095945347 0.898808983 1 16.9690569 -5.741215394 24.71011345 0.989625 1.054584759 0.195273492 0.063837219 393.7328743 481066.8659 0.017954448 0.0310461 1.81E-06 5.741215394 0.06495976 KMPLDLS(ph)PLATPIIR ddPTM_A459_MK2206_30min_R1 1 KMPLDLSPLATPIIR 15 1 B8ZZU6;E9PBF9;P15336-5;P15336;E9PEK8;H7C2N6;P15336-3;P15336-7;P15336-4;C9JCI8 B8ZZU6 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 KMPLDLS(0.573)PLAT(0.427)PIIR 60.454 0.042866 5481900 2283.3 2376.5 1974.4 1833.4 2360.2 1813.9 1705.6 2632.6 1391.7 965.87 TRUE FALSE 2089.093345 2221.789418 1840.383229 1974.608786 2266.188236 1916.60145 1591.822536 2609.583456 1536.372195 1085.529268 1.924492879 2.046733777 1.695378728 1.819028602 2.087634395 1.765591687 1.466402228 2.403973374 1.41532084 1 10.08418291 -8.520683166 24.43096363 0.999999986 1.885242856 0.600549934 0.238293969 82.5104422 918116.3486 0.219811718 0.056755141 3.02E-09 8.520683166 0.88524287 KMPLDLS(ph)PLATPIIR ddPTM_A459_MK2206_30min_R2 1 KMPLDLSPLATPIIR 15 1 B8ZZU6;E9PBF9;P15336-5;P15336;E9PEK8;H7C2N6;P15336-3;P15336-7;P15336-4;C9JCI8 B8ZZU6 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 KMPLDLS(0.624)PLAT(0.376)PIIR 64.761 0.034895 23772000 86385 155410 128490 157450 183140 169690 150780 107960 156970 108520 TRUE FALSE 92998.70202 147692.5654 132773.7925 144585.8313 175949.0034 176147.6719 130982.4049 122070.7427 170622.9669 104979.0013 0.885879089 1.406877219 1.264765247 1.377283357 1.676039982 1.677932441 1.247701 1.16281105 1.625305678 1 16.67974125 -4.760805225 24.88016287 1.397583815 0.885878465 0.322115264 0.214891995 17.43326634 683406.2645 0.053782906 0.311086862 1.73E-05 4.760805225 -0.51170535 KMPLDLSPLAT(ph)PIIR ddPTM_A459_MK2206_30min_R2 1 KMPLDLSPLATPIIR 15 1 B8ZZU6;E9PBF9;P15336-5;P15336;E9PEK8;H7C2N6;P15336-3;P15336-7;P15336-4;C9JCI8 B8ZZU6 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 KMPLDLS(0.398)PLAT(0.602)PIIR 83.666 0.02877 27552000 78479 141580 122210 162930 167890 175170 133720 112760 136170 120700 TRUE FALSE 84487.41258 134549.3431 126284.4204 149618.0978 161297.795 181836.2171 116162.4034 127498.1192 148013.8205 116761.5689 0.72358922 1.152342713 1.081558098 1.281398488 1.381428809 1.557329341 0.99486847 1.091952775 1.267658716 1 16.83320598 -4.405236288 1.44795774 1.228909959 3.58E-11 0.421375172 0.167854663 3.169928244 2.975178465 0.050104588 7.34538554 3.93E-05 4.405236288 -1.228909959 KMS(ph)AENGQQR ddPTM_A459_MK2206_30min_R1 1 KMSAENGQQR 10 1 M0R2L6 M0R2L6 RPL37A 1 KMS(1)AENGQQR 80.014 0.024963 20721000 2891.1 2428.8 2575 2133.2 3240.3 3197.4 3242.2 3108.5 2246 2373.6 TRUE FALSE 2645.196763 2270.684679 2400.216174 2297.499434 3111.23199 3378.434025 3025.918754 3081.322712 2479.479737 2667.659488 0.991579613 0.85118985 0.899746083 0.861241641 1.166277782 1.266441253 1.134297225 1.155065977 0.929458857 1 11.38135881 -6.260724089 24.99803679 1.125521391 0.897300528 0.533366397 0.094332656 47.87569359 1673166.812 0.028949538 0.035178905 5.49E-07 6.260724089 -0.228220862 KMS(ph)DDEDDDEEEYGKEEHEK ddPTM_A459_MK2206_30min_R2 3 KMSDDEDDDEEEYGKEEHEK 20 2 Q7KZ85;Q7KZ85-3 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK 65.105 0.0067525 42540000 175771 124689 158651 90230 88451 51429.8 150146 107626 66954 186565 TRUE FALSE 189228.1629 118497.1256 163940.3452 82857.92037 84977.96931 53386.99708 130431.6498 121693.0877 72777.53789 180477.3993 1.048486756 0.656575981 0.908370498 0.459104135 0.47085103 0.295809876 0.722703509 0.67428436 0.403250147 1 17.46145866 -5.757463073 24.9977124 0.55173574 0.849687617 0.29457951 0.206909385 123.1960149 774478.8004 0.05488781 0.090735213 1.75E-06 5.757463073 0.297951877 KMS(ph)GGSTMSSGGGNTNNSNSK ddPTM_A459_MK2206_30min_R1 2 KMSGGSTMSSGGGNTNNSNSK 21 1 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70 A0A6E1WJ75 LDB1 LIM domain-binding protein 1 1 KMS(0.868)GGS(0.103)T(0.028)MSSGGGNTNNSNSK;KMS(0.996)GGS(0.003)T(0.001)MSSGGGNTNNSNSK 141.29 8.48E-06 16184000 4583.55 4515.49 4406.96 3757.82 4317.69 3734.57 4015.84 4110.37 3796.2 3318.61 TRUE FALSE 4193.695003 4221.53078 4107.827834 4047.247948 4145.707264 3946.018126 3747.950641 4074.433468 4190.828575 3729.744461 1.124392045 1.131855231 1.101369779 1.08512741 1.111525818 1.057986188 1.004881348 1.092416253 1.123623513 1 11.86486107 -5.959676109 0.802775506 1.059853807 1.132603854 0.347115786 0.03668321 1.007908928 1.274512074 0.018941601 0.048625163 1.10E-06 5.959676109 0.072750047 KMS(ph)GGSTMSSGGGNTNNSNSK ddPTM_A459_MK2206_30min_R2 5 KMSGGSTMSSGGGNTNNSNSK 21 1 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70 A0A6E1WJ75 LDB1 LIM domain-binding protein 1 1 KMS(0.455)GGS(0.272)T(0.272)MSSGGGNTNNSNSK;KMS(0.962)GGS(0.019)T(0.019)MSSGGGNTNNSNSK;KMS(0.97)GGS(0.008)T(0.021)MSSGGGNTNNSNSK;KMS(0.971)GGS(0.024)T(0.005)MSSGGGNTNNSNSK;KMS(0.83)GGS(0.08)T(0.08)MS(0.008)S(0.001)GGGNTNNSNSK 123.71 3.68E-05 75942600 172503.8 215224.7 196967 225095.2 201681 183495.7 229700.4 178582.7 181381 195797.5 TRUE FALSE 185710.8236 204536.9544 203533.7815 206704.2021 193761.9906 190478.7574 199540.4616 201924.0721 197157.1915 189408.6436 0.980477026 1.07987128 1.074574938 1.091313459 1.022983888 1.005649762 1.053491846 1.066076332 1.040909157 1 17.53114264 -6.300756776 24.9029996 1.034627545 1.059511213 0.109715025 0.033849573 1229.348181 778644.9177 0.010767403 0.012209311 5.00E-07 6.300756776 0.024883668 KMS(ph)QPGSPS(ph)PK ddPTM_A459_MK2206_30min_R2 1 KMSQPGSPSPK 11 1 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;F5GWX5;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y4X2;A0A2R8Y7I0;A0A2R8Y7M9 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 2 KMS(0.998)QPGS(0.049)PS(0.952)PK 102.5 0.047788 4580900 37568 31655 29453 30697 29724 18564 27800 21988 15132 24944 TRUE FALSE 40444.23496 30083.05873 30434.94832 28188.95691 28556.88641 19270.46603 24149.82661 24861.9071 16448.15401 24130.07932 1.676092085 1.246703682 1.261286708 1.168208215 1.183455969 0.798607654 1.000818368 1.030328445 0.681645252 1 14.55854504 -1.522878753 0.3354334 0.875216487 8.9357074 0.754824412 0.129249075 28.6148292 0.406425992 0.113298057 143.7859095 0.029999999 1.522878753 8.060490913 KMSGGS(ph)TMSSGGGNTNNSNSK ddPTM_A459_MK2206_30min_R1 1 KMSGGSTMSSGGGNTNNSNSK 21 1 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70 A0A6E1WJ75 LDB1 LIM domain-binding protein 1 1 KMS(0.02)GGS(0.89)T(0.09)MSSGGGNTNNSNSK 142.85 5.70E-06 16541000 2607.3 3047.3 3434.1 2655.2 2743.2 2502.3 3008.9 2957 2747.5 2600.8 TRUE FALSE 2385.535444 2848.920216 3201.00286 2859.703964 2633.932535 2643.978064 2808.181771 2931.147261 3033.112457 2923.006739 0.816123826 0.974654002 1.09510622 0.978343268 0.901103819 0.90454053 0.960716831 1.002784982 1.03766865 1 11.51323744 -7.802002201 3.607341874 1.018733374 0.951271362 0.169319983 0.067597717 0.488352819 13.04635611 0.043017939 0.019927111 1.58E-08 7.802002201 -0.067462012 KMSGGS(ph)TMSSGGGNTNNSNSK ddPTM_A459_MK2206_30min_R2 1 KMSGGSTMSSGGGNTNNSNSK 21 1 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70 A0A6E1WJ75 LDB1 LIM domain-binding protein 1 1 KMS(0.385)GGS(0.515)T(0.094)MS(0.005)S(0.001)GGGNTNNSNSK 81.576 0.001245 3218200 8824.9 9976.8 11466 12286 12390 10316 13454 11362 10580 12153 TRUE FALSE 9500.541129 9481.36662 11848.27072 11282.1945 11903.50635 10708.58261 11687.47364 12847.05241 11500.22928 11756.44861 0.808113185 0.806482207 1.007810361 0.959660088 1.012508687 0.910868832 0.99413301 1.092766433 0.978206061 1 13.5211647 -5.2590556 24.96861973 0.994207055 0.807297674 0.750255879 0.043201424 97.32329138 1019384.982 0.011661809 0.027970309 5.51E-06 5.2590556 -0.186909381 KNDMDEPPPLDYGS(ph)GEDDGK ddPTM_A459_MK2206_30min_R1 2 KNDMDEPPPLDYGSGEDDGK 20 1 A0A5F9ZHX5;H7C2H0;Q12873-2;Q12873;Q12873-3 A0A5F9ZHX5;Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KNDMDEPPPLDYGS(1)GEDDGK;KNDMDEPPPLDYGS(1)GEDDGK 165 2.78E-08 22976000 6308 7540.3 8458.1 5798.6 5205.6 5296.1 6536.1 6473.4 8326.3 9009.3 TRUE FALSE 5771.471475 7049.425099 7883.987738 6245.209177 4998.249929 5595.960605 6100.088695 6416.803746 9191.848681 10125.4401 0.569997098 0.696209254 0.778631611 0.616783973 0.493632857 0.552663445 0.602451709 0.633730848 0.907797448 1 13.305697 -8.334002244 3.097039589 0.995561973 0.616927751 0.77191803 0.073864712 0.128889002 2.282214199 0.079105692 0.021693399 4.63E-09 8.334002244 -0.378634222 KNDMDEPPPLDYGS(ph)GEDDGK ddPTM_A459_MK2206_30min_R2 4 KNDMDEPPPLDYGSGEDDGK 20 1 A0A5F9ZHX5;H7C2H0;Q12873-2;Q12873;Q12873-3 A0A5F9ZHX5;Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KNDMDEPPPLDY(0.002)GS(0.998)GEDDGK;KNDMDEPPPLDYGS(1)GEDDGK;KNDMDEPPPLDY(0.004)GS(0.996)GEDDGK;KNDMDEPPPLDY(0.002)GS(0.998)GEDDGK 144.48 1.66E-05 25578800 279680 221392 238646.2 220844 205628 141453.7 275832 225390.3 154166.4 285276 TRUE FALSE 301092.5158 210397.9952 246602.5452 202800.3388 197554.0115 146836.8197 239614.9271 254849.5861 167575.5148 275967.4675 1.091043515 0.762401442 0.893592812 0.734870456 0.715859783 0.53208018 0.86827237 0.923476917 0.607229237 1 18.07413868 -2.551849169 1.41710441 0.767901202 199.9981916 0.298228733 0.13851271 1072.223913 4.600587443 0.039097555 691950.746 0.002806408 2.551849169 199.2302903 KNDMDEPPPLDYGS(ph)GEDDGKSDK ddPTM_A459_MK2206_30min_R1 1 KNDMDEPPPLDYGSGEDDGKSDK 23 2 A0A5F9ZHX5;H7C2H0;Q12873-2;Q12873;Q12873-3 A0A5F9ZHX5;Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KNDMDEPPPLDY(0.279)GS(0.696)GEDDGKS(0.025)DK 68.689 0.0012141 9320900 3504.1 4135.2 4358.7 3891.7 2593.4 2111.2 2757.7 3327.6 3390.2 3111 TRUE FALSE 3206.057894 3865.997728 4062.843588 4191.439408 2490.099386 2230.73432 2573.738865 3298.507144 3742.623422 3496.414167 0.916955984 1.105703599 1.162002953 1.198782298 0.71218662 0.638006315 0.736108122 0.943397145 1.070417646 1 11.77166037 -6.258707883 24.99777888 0.830892955 1.10128865 0.409187304 0.14356057 246.9958966 2260425.125 0.046996086 0.057993189 5.51E-07 6.258707883 0.270395695 KNDMDEPPPLDYGS(ph)GEDDGKSDK ddPTM_A459_MK2206_30min_R2 2 KNDMDEPPPLDYGSGEDDGKSDK 23 2 A0A5F9ZHX5;H7C2H0;Q12873-2;Q12873;Q12873-3 A0A5F9ZHX5;Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KNDMDEPPPLDY(0.321)GS(0.363)GEDDGKS(0.316)DK;KNDMDEPPPLDY(0.138)GS(0.861)GEDDGKS(0.001)DK 96.718 0.0013307 11821000 37608 43590 43310 39765 48144 29191.2 46889 36597 35398 39188 TRUE FALSE 40487.2974 41425.38399 44753.93378 36516.0723 46253.62466 30302.09157 40732.41798 41380.35356 38476.85406 37909.29877 1.068004387 1.092749941 1.180552931 0.963248424 1.220112905 0.799331366 1.074470362 1.091562094 1.0149714 1 15.21026415 KNES(ph)PFWK ddPTM_A459_MK2206_30min_R2 1 KNESPFWK 8 1 P46013 P46013 MKI67 Antigen KI-67 1 KNES(1)PFWK 65.395 0.043625 5370900 78180 75208 58019 77633 59202 53586 77045 59657 38753 51828 TRUE FALSE 84165.52091 71473.28008 59953.3245 71290.13556 56877.43201 55625.25278 66928.89895 67454.37473 42123.66589 50136.8566 1.678715552 1.425563646 1.195793445 1.421910754 1.134443519 1.109468294 1.334924115 1.345404944 0.840173652 1 15.61358393 -1.522878745 0.355426382 1.107099117 7.544207161 0.561356757 0.15203636 52.0749585 0.729851019 0.127878586 225.8077677 0.03 1.522878745 6.437108044 KNGSTAVAES(ph)VASPQK ddPTM_A459_MK2206_30min_R2 1 KNGSTAVAESVASPQK 16 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 KNGSTAVAES(0.781)VAS(0.218)PQK 110.32 0.0050583 7403200 7831.1 7820.8 6115.9 8138.2 7033.5 6048.5 8912.8 6642.1 6011.6 8134.2 TRUE FALSE 8430.655037 7432.430445 6319.801054 7473.283027 6757.329449 6278.679906 7742.538654 7510.245276 6534.478102 7868.78172 1.071405376 0.944546527 0.803148604 0.949738256 0.858751671 0.797922744 0.983956466 0.954435584 0.830430724 1 12.94192457 -4.830126366 3.710887994 0.89460483 1.081425477 0.357004591 0.070095833 0.253386368 5.921164655 0.017320489 0.118514496 1.48E-05 4.830126366 0.186820647 KNGSTAVAESVAS(ph)PQK ddPTM_A459_MK2206_30min_R1 2 KNGSTAVAESVASPQK 16 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 KNGSTAVAESVAS(1)PQK;KNGSTAVAESVAS(1)PQK 155.86 4.51E-05 135157000 32150 31602 31466 27166 27695 23197 28634 28657 28178 27182 TRUE FALSE 29415.47367 29544.70406 29330.17559 29258.33003 26591.8495 24510.39409 26723.87811 28406.45487 31107.20394 30549.51137 0.962878696 0.967108891 0.96008657 0.957734795 0.870450895 0.802317058 0.874772686 0.929849729 1.018255368 1 14.89886168 -8.19412027 4.645471679 1.009394653 0.912720737 0.356733073 0.050427662 0.26267725 10.8283521 0.044434748 0.01522748 6.40E-09 8.19412027 -0.096673916 KNGSTAVAESVAS(ph)PQK ddPTM_A459_MK2206_30min_R2 5 KNGSTAVAESVASPQK 16 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 KNGSTAVAESVAS(1)PQK;KNGSTAVAESVAS(1)PQK;KNGSTAVAES(0.002)VAS(0.998)PQK;KNGSTAVAES(0.062)VAS(0.938)PQK;KNGSTAVAESVAS(1)PQK 177.09 6.05E-07 297590000 621935 632082 643578 579665 599331 459650 695464 527849 481301 648516 TRUE FALSE 669550.8218 600693.727 665034.5693 532304.5152 575798.2535 477142.3028 604148.7414 596840.6767 523163.691 627354.976 1.06725992 0.957502132 1.060061042 0.848490146 0.917818899 0.760561916 0.963009404 0.951360393 0.833919728 1 19.25892247 -5.760070106 24.99982349 0.892426333 1.021197153 0.414839468 0.071486338 35.54435039 648930.5331 0.019187602 0.0310433 1.74E-06 5.760070106 0.12877082 KNNPS(ph)PPPDSDLER ddPTM_A459_MK2206_30min_R2 1 KNNPSPPPDSDLER 14 1 E7ESD5;E9PLN6;F2Z2Y1;O95677-3;O95677-5;O95677-2;O95677-4;O95677 E7ESD5 EYA4 Eyes absent homolog;Eyes absent homolog 4 1 KNNPS(0.992)PPPDS(0.008)DLER 60.618 0.045589 7248400 39740 54048 46514 50531 60338 47764 59147 41180 52901 51758 TRUE FALSE 42782.52495 51364.05491 48064.75354 46402.45566 57968.82695 49581.69249 51380.92785 46562.36739 57502.23336 50069.1407 0.854468928 1.025862521 0.959967614 0.926767566 1.157775551 0.990264498 1.026199514 0.929961384 1.148456565 1 15.61163408 -3.67436619 0.910217604 1.023830092 1.11E-30 0.278376861 0.076639243 19.09011092 2.653123008 0.024856877 30.94092259 0.000211658 3.67436619 -1.023830092 KNQKPSQVNGAPGS(ph)PTEPAGQK ddPTM_A459_MK2206_30min_R1 1 KNQKPSQVNGAPGSPTEPAGQK 22 2 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 KNQKPSQVNGAPGS(0.978)PT(0.022)EPAGQK 78.674 0.00054988 24900000 15089 15891 15199 13120 13220 12253 13510 15528 12348 12463 TRUE FALSE 13805.60131 14856.49301 14167.33423 14130.50467 12693.41941 12946.75427 12608.77255 15392.24033 13631.61879 14007.01053 0.985620828 1.060646951 1.011445961 1.008816595 0.906219024 0.924305314 0.900175846 1.098895464 0.973199724 1 13.77386146 -6.023078061 23.48905661 0.965763555 1.021170923 0.158923556 0.056066355 660.7890704 672557.8429 0.017548429 0.022849368 9.48E-07 6.023078061 0.055407369 KNQKPSQVNGAPGS(ph)PTEPAGQK ddPTM_A459_MK2206_30min_R2 1 KNQKPSQVNGAPGSPTEPAGQK 22 2 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 KNQKPSQVNGAPGS(0.96)PT(0.04)EPAGQK 86.625 0.00022471 129420000 480610 466530 460440 504180 520900 424630 622220 378210 425280 475010 TRUE FALSE 517405.8711 443362.7986 475790.8398 462986.8812 500446.8487 440789.5922 540521.7666 427643.3456 462270.0857 459510.4626 1.125993668 0.964858985 1.035429829 1.007565483 1.089086951 0.959259099 1.17629915 0.930649855 1.006005572 1 18.80973819 KNQKPSQVNGAPGSPT(ph)EPAGQK ddPTM_A459_MK2206_30min_R2 3 KNQKPSQVNGAPGSPTEPAGQK 22 2 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 KNQKPSQVNGAPGS(0.43)PT(0.57)EPAGQK;KNQKPSQVNGAPGS(0.167)PT(0.833)EPAGQK;KNQKPSQVNGAPGS(0.423)PT(0.577)EPAGQK 77.969 0.0048632 173035000 365195 389977 392056 384757 425931 329114 529389 342996 367975 448512 TRUE FALSE 393154.61 370611.3093 405126.9514 353321.1223 409206.8088 341638.6639 459879.5884 387826.7549 399980.8004 433877.0902 0.90614282 0.854185016 0.933736675 0.81433459 0.943139931 0.787408858 1.059930563 0.893863178 0.921875825 1 18.72692688 -7.256593857 24.99784186 0.960072655 0.875556362 0.36141609 0.061863833 495.1331673 2554380.531 0.02279295 0.017092661 5.54E-08 7.256593857 -0.084516292 KNQS(ph)SEDILR ddPTM_A459_MK2206_30min_R1 1 KNQSSEDILR 10 1 Q13625-2;Q13625;Q13625-3;H0Y847 Q13625-2 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 KNQS(0.986)S(0.014)EDILR 96.23 0.011254 12074000 5741.8 4634.1 5465.4 5808.6 6252.9 5818.7 7562 6660.7 5117.6 4093.5 TRUE FALSE 5253.429759 4332.419248 5094.423875 6255.979378 6003.833752 6148.149766 7057.552778 6602.466202 5649.592834 4600.633684 1.141892643 0.941700545 1.107330908 1.359808193 1.305001477 1.336370202 1.534039278 1.435121041 1.228003189 1 12.16761687 -5.680705537 4.232969295 1.342365798 1.038559273 0.392203465 0.140835939 0.183481769 6.150155507 0.037929794 0.067203823 2.09E-06 5.680705537 -0.303806525 KNQS(ph)SEDILR ddPTM_A459_MK2206_30min_R2 1 KNQSSEDILR 10 1 Q13625-2;Q13625;Q13625-3;H0Y847 Q13625-2 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 KNQS(0.905)S(0.095)EDILR 69.846 0.038896 14121000 27347 43059 29015 37617 37506 39465 48956 40946 32138 36444 TRUE FALSE 29440.70735 40920.75267 29982.34562 34543.57077 36033.32599 40966.86823 42528.01839 46297.78279 34933.30515 35254.83526 0.835082823 1.160713201 0.85044634 0.979825051 1.022081814 1.162021264 1.206303138 1.313232141 0.990879829 1 15.10553352 -6.638132544 3.117223254 1.159484592 0.965772403 0.312974229 0.121873749 0.280650241 5.446085518 0.041300613 0.04110628 2.30E-07 6.638132544 -0.193712189 KNQSS(ph)EDILR ddPTM_A459_MK2206_30min_R2 1 KNQSSEDILR 10 1 Q13625-2;Q13625;Q13625-3;H0Y847 Q13625-2 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 KNQS(0.36)S(0.64)EDILR 68.515 0.040901 11140000 38609 59506 52517 57388 52853 54660 61859 53947 49643 51993 TRUE FALSE 41564.93473 56551.01857 54267.89057 52699.21682 50777.72565 56740.1246 53736.83899 60998.05813 53960.85841 50296.47267 0.826398603 1.124353569 1.078960167 1.047771624 1.009568325 1.128113396 1.068401742 1.212770099 1.07285572 1 15.61816961 -6.760893532 24.99999181 1.107974675 1.028457896 0.153319274 0.088966172 27.93230419 1279320.2 0.029417149 0.027749668 1.73E-07 6.760893532 -0.079516779 KNQTALDALHAQTVSQTAAS(ph)SPQDAYR ddPTM_A459_MK2206_30min_R2 1 KNQTALDALHAQTVSQTAASSPQDAYR 27 1 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L "Histone-lysine N-methyltransferase, H3 lysine-79 specific" 1 KNQTALDALHAQTVSQTAAS(0.5)S(0.5)PQDAYR 128.22 4.58E-12 6877100 76977 111010 94639 121410 138380 126490 128660 98788 116370 109680 TRUE FALSE 82870.41831 105497.4048 97794.21703 111490.4146 132946.5059 131303.6656 111766.7875 111699.9308 126491.6523 106101.1506 0.781051081 0.994309715 0.921707413 1.050793644 1.253016628 1.23753291 1.053398449 1.052768327 1.192179836 1 16.69508078 -5.863313595 3.19972104 1.136743878 0.904472932 0.561610046 0.091476248 0.188629896 3.833166346 0.027436369 0.044128055 1.37E-06 5.863313595 -0.232270947 KNQTALDALHAQTVSQTAASS(ph)PQDAYR ddPTM_A459_MK2206_30min_R2 1 KNQTALDALHAQTVSQTAASSPQDAYR 27 1 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L "Histone-lysine N-methyltransferase, H3 lysine-79 specific" 1 KNQTALDALHAQTVSQTAAS(0.218)S(0.782)PQDAYR 125.97 4.98E-12 5559300 58276 82836 74114 91509 99667 99588 93222 71531 86898 88036 TRUE FALSE 62737.65537 78722.48469 76584.92377 84032.42198 95753.57279 103377.8911 80981.83942 80880.3473 94456.23096 85163.39253 0.73667398 0.924369995 0.899270467 0.986719992 1.12435132 1.21387709 0.950899641 0.949707907 1.109117758 1 16.3779458 -5.026725839 0.980757103 1.053569678 0.679136815 0.563615547 0.084166528 1.156490021 1.162448411 0.031511547 0.420995468 9.40E-06 5.026725839 -0.374432862 KNS(ph)ITEISDNEDDLLEYHR ddPTM_A459_MK2206_30min_R2 2 KNSITEISDNEDDLLEYHR 19 1 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 KNS(0.464)IT(0.464)EIS(0.072)DNEDDLLEYHR;KNS(0.442)IT(0.442)EIS(0.117)DNEDDLLEYHR 88.427 0.0021561 8755200 21304 27687 23467 28359 25114 27824 26998 24141 22047 22405 TRUE FALSE 22935.05062 26312.10384 24249.37807 26041.97898 24127.89817 28882.86182 23453.13017 27296.31159 23964.60821 21673.92668 1.058186223 1.213998009 1.118827171 1.201534884 1.113222284 1.332608633 1.082089578 1.259407766 1.105688349 1 14.40367293 -8.531395205 22.2764236 0.999999994 1.173968768 0.309867114 0.079628371 272.4398903 712621.8526 0.070182338 0.018121002 2.94E-09 8.531395205 0.173968774 KNS(ph)LISSLEEEVSILNR ddPTM_A459_MK2206_30min_R1 1 KNSLISSLEEEVSILNR 17 1 A0A087WY61;Q14980-2;Q14980;H0YFY6;Q14980-4;Q14980-3 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 KNS(0.989)LIS(0.009)S(0.002)LEEEVSILNR 102.61 0.0018036 2992800 499.52 420.72 565.57 452.03 460 458.9 484.16 469.24 309.58 259.75 TRUE FALSE 457.0332009 393.3310515 527.1806842 486.8454289 441.6772259 484.8825214 451.8625698 465.1374842 341.7619488 291.929791 1.565558621 1.347348108 1.805847503 1.667679846 1.512957018 1.660955943 1.547846721 1.59331969 1.170699118 1 8.189477633 -8.373225614 2.989163067 1.004440757 1.590694086 0.766396564 0.112640581 0.115620871 1.90914911 0.108647506 0.029482308 4.23E-09 8.373225614 0.586253329 KNS(ph)LRVEGDNIYVR ddPTM_A459_MK2206_30min_R2 1 KNSLRVEGDNIYVR 14 2 O43491 O43491 EPB41L2 Band 4.1-like protein 2 1 KNS(1)LRVEGDNIYVR 59.116 0.03695 4557200 14251 17369 11177 14284 10356 11445 10446 7276.3 12905 11762 TRUE FALSE 15342.06752 16506.48072 11549.6356 13116.95151 9949.371405 11880.54749 9074.427652 8227.337393 14027.45357 11378.2069 1.348373047 1.450710192 1.015066407 1.152813586 0.874423491 1.044149363 0.797527038 0.723078554 1.232835164 1 13.4739856 -5.41701817 1.162088318 0.931631689 1.458270193 0.53304851 0.152319342 0.496305867 1.085664314 0.049932022 0.243754329 3.83E-06 5.41701817 0.526638505 KNS(ph)STDQGS(ph)DEEGSLQK ddPTM_A459_MK2206_30min_R2 1 KNSSTDQGSDEEGSLQK 17 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 2 KNS(0.993)S(0.003)T(0.005)DQGS(0.996)DEEGS(0.004)LQK 107.56 0.0059585 12729000 36378 37896 37676 26953 28343 17452 36328 28044 19164 33043 TRUE FALSE 39163.12765 36014.13975 38932.09904 24750.85368 27230.11141 18116.14809 31558.08996 31709.44709 20830.85008 31964.80962 1.225195085 1.126680877 1.217967493 0.774315692 0.851877791 0.566752886 0.987276018 0.992011136 0.651680718 1 14.96419688 -5.759558279 24.99999105 0.827902504 1.183621196 0.584900433 0.138130023 34.84527819 463081.4276 0.038039618 0.061840545 1.74E-06 5.759558279 0.355718692 KNS(ph)TGSGHSAQELPTIR ddPTM_A459_MK2206_30min_R1 4 KNSTGSGHSAQELPTIR 17 1 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 KNS(0.695)T(0.271)GS(0.033)GHS(0.001)AQELPTIR;KNS(0.935)T(0.065)GSGHSAQELPTIR;KNS(0.949)T(0.032)GS(0.018)GHSAQELPTIR;KNS(0.955)T(0.044)GS(0.001)GHSAQELPTIR 110.34 0.0010997 87997000 7720.6 6188.34 6210.46 4796.24 7566.1 7587.3 8317.8 8419.5 5705.8 5611.78 TRUE FALSE 7063.922428 5785.477941 5788.911279 5165.647236 7264.726216 8016.886369 7762.934739 8345.889199 6298.938328 6307.009673 1.120011351 0.917309191 0.91785356 0.819032712 1.151849544 1.271107353 1.230842371 1.323271983 0.998720258 1 12.62274043 -6.389046679 6.158785433 1.191181638 0.940812611 0.430846789 0.121375301 0.20069541 9.219915672 0.037227453 0.042203946 4.08E-07 6.389046679 -0.250369027 KNS(ph)TGSGHSAQELPTIR ddPTM_A459_MK2206_30min_R2 1 KNSTGSGHSAQELPTIR 17 1 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 KNS(0.988)T(0.012)GSGHSAQELPTIR 119.62 0.00076925 15409000 15348 24096 17264 19800 21827 22001 25841 18768 22869 21814 TRUE FALSE 16523.05468 22899.42768 17839.57314 18182.27666 20969.96231 22838.26347 22448.04566 21221.04204 24858.10428 21102.21097 0.783001113 1.085167223 0.845388816 0.861628987 0.993732948 1.082268749 1.063776952 1.005631214 1.177985772 1 14.36510654 -6.506611668 3.899006003 1.065188136 0.904766793 0.468885784 0.085905989 0.2089512 7.081698572 0.027482398 0.02951407 3.11E-07 6.506611668 -0.160421344 KNS(ph)VHEQEAINSDPELSNCENFQK ddPTM_A459_MK2206_30min_R2 1 KNSVHEQEAINSDPELSNCENFQK 24 1 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 KNS(0.982)VHEQEAINS(0.001)DPELS(0.017)NCENFQK 125.92 7.29E-08 5617600 28664 33391 37250 31008 32016 25968 37545 26625 25313 34643 TRUE FALSE 30858.53788 31732.8515 38491.89641 28474.54721 30758.89097 26956.23044 32615.2964 30104.97892 27514.67898 33512.60175 0.920804004 0.946893104 1.14857977 0.849666863 0.917830588 0.804361017 0.973224838 0.898318165 0.821024855 1 15.03241607 KNSS(ph)QDDLFPTSDTPR ddPTM_A459_MK2206_30min_R2 1 KNSSQDDLFPTSDTPR 16 1 Q9H6T3-3;Q9H6T3-2;Q9H6T3 Q9H6T3-3 RPAP3 RNA polymerase II-associated protein 3 1 KNS(0.1)S(0.9)QDDLFPTSDTPR 97.214 0.013904 3820700 11450 17637 12914 17204 17267 14117 16786 14475 16719 14928 TRUE FALSE 12326.6208 16761.17223 13344.54631 15798.37817 16589.01082 14654.23233 14581.97804 16366.9322 18173.1884 14440.90058 0.853590864 1.160673611 0.924079924 1.09400228 1.14875182 1.014772745 1.009769297 1.133373373 1.258452566 1 13.8178731 -4.748389708 24.85645816 1.079886755 0.853590281 0.354052904 0.092751659 700.2444041 1333710.577 0.023123158 0.420720463 1.78E-05 4.748389708 -0.226296475 KNSSQSLMVPQSGS(ph)PEPESIR ddPTM_A459_MK2206_30min_R2 3 KNSSQSLMVPQSGSPEPESIR 21 1 F5H1U9;O75970-5;O75970-3;O75970-2;O75970;A0A075B6R8;B7ZB24;H0YGQ3 F5H1U9 MPDZ Multiple PDZ domain protein 1 KNSSQSLMVPQS(0.227)GS(0.751)PEPES(0.022)IR;KNSSQSLMVPQS(0.06)GS(0.913)PEPES(0.027)IR;KNSSQSLMVPQS(0.249)GS(0.655)PEPES(0.096)IR 93.546 0.00026099 22361800 116884 165642 151788 181198 169658 164386 181813 137770 171194 153662 TRUE FALSE 125832.7289 157416.4591 156848.5362 166393.5438 162996.3745 170641.8244 157940.7347 155777.012 186084.1447 148648.0215 0.846514657 1.05898792 1.055167331 1.119379472 1.096525691 1.147958935 1.06251488 1.047958866 1.251844073 1 17.18154074 -4.125088215 1.304511907 1.10357838 2.49E-09 0.573287357 0.064666163 4.424192573 1.942326045 0.017728463 9.901918327 7.50E-05 4.125088215 -1.103578378 KNSSTDQGS(ph)DEEGSLQK ddPTM_A459_MK2206_30min_R1 3 KNSSTDQGSDEEGSLQK 17 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 KNSSTDQGS(1)DEEGSLQK;KNSS(0.006)T(0.017)DQGS(0.976)DEEGS(0.001)LQK;KNSSTDQGS(0.962)DEEGS(0.038)LQK 104.49 0.0014172 35412000 8390.4 7943 8734 7816.5 7490.9 7211.6 7222.3 6737.6 7932.3 7283.4 TRUE FALSE 7676.75242 7425.909256 8141.160414 8418.528184 7192.521591 7619.91456 6740.513545 6678.693874 8756.890971 8185.722579 0.937822208 0.907178222 0.994556111 1.028440447 0.878666669 0.930878672 0.823447592 0.815895458 1.069776173 1 12.99889406 -6.286800014 24.73844442 0.906310772 0.964694686 0.065131982 0.078034049 1554.607795 1516462.91 0.024352274 0.027625436 5.17E-07 6.286800014 0.058383914 KNSSTDQGS(ph)DEEGSLQK ddPTM_A459_MK2206_30min_R2 5 KNSSTDQGSDEEGSLQK 17 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 KNSS(0.001)T(0.001)DQGS(0.998)DEEGSLQK;KNSS(0.003)T(0.001)DQGS(0.986)DEEGS(0.011)LQK;KNSSTDQGS(1)DEEGSLQK;KNS(0.003)S(0.003)T(0.003)DQGS(0.969)DEEGS(0.02)LQK;KNSSTDQGS(0.979)DEEGS(0.021)LQK 129.07 0.00049622 75352100 178934 196342 197298 209604 245096 185724 246853 181368 176135 236393 TRUE FALSE 192633.3246 186591.9418 203875.8168 192478.6827 235472.2995 192791.857 214440.9046 205073.4203 191454.9039 228679.5158 0.842372453 0.815953896 0.891535108 0.841696214 1.029704382 0.843065704 0.93773552 0.896772147 0.837219299 1 17.80296761 -5.684908265 1.801903935 0.914146408 0.832873017 0.230377424 0.061339042 0.547657684 3.589417793 0.018170341 0.041039693 2.07E-06 5.684908265 -0.081273391 KNST(ph)GSGHSAQELPTIR ddPTM_A459_MK2206_30min_R2 2 KNSTGSGHSAQELPTIR 17 1 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 KNS(0.275)T(0.59)GS(0.099)GHS(0.036)AQELPTIR;KNS(0.204)T(0.638)GS(0.155)GHS(0.003)AQELPTIR 55.208 0.044061 87298000 47120 86276 53283 86154 63717 69822 69313 60295 79978 71635 TRUE FALSE 50727.54343 81991.6593 55059.42863 79114.94261 61215.15043 72479.12514 60212.11984 68175.76352 86934.34187 69297.55582 0.732025002 1.183182557 0.794536373 1.14167003 0.88336666 1.04591171 0.868892404 0.98381195 1.254508054 1 16.08051685 -8.085363253 9.052411209 1.125984748 0.958962896 0.182935311 0.146961458 0.636951933 63.12917163 0.089187145 0.033615767 8.22E-09 8.085363253 -0.167021851 KNSVHEQEAINS(ph)DPELSNCENFQK ddPTM_A459_MK2206_30min_R1 1 KNSVHEQEAINSDPELSNCENFQK 24 1 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 KNS(0.014)VHEQEAINS(0.659)DPELS(0.327)NCENFQK 85.224 5.59E-05 3733700 701.26 617 566.37 588.52 566.52 583.08 709.25 498.77 671.52 674.92 TRUE FALSE 641.6141545 576.8331879 527.9263824 633.8479124 543.9543088 616.0934857 661.9372266 494.4093065 741.3269071 758.534185 0.845860565 0.760457734 0.695982321 0.835622079 0.717112451 0.812215847 0.872653125 0.651795682 0.977315092 1 9.56707039 -8.361508272 7.312206726 0.995819841 0.775844504 0.622368452 0.06692373 0.176745189 11.13330622 0.061302476 0.015869298 4.35E-09 8.361508272 -0.219975336 KNTFTAWS(ph)DEESDYEIDDR ddPTM_A459_MK2206_30min_R1 1 KNTFTAWSDEESDYEIDDR 19 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 KNT(0.002)FT(0.001)AWS(0.989)DEES(0.006)DY(0.001)EIDDR 77.657 0.0040926 5084300 1116.1 1200.9 1139.3 997.73 1100.3 1218.8 1366.6 830.69 1569.7 1379.9 TRUE FALSE 1021.169834 1122.721192 1061.96749 1074.575337 1056.472721 1287.807403 1275.436608 823.4273649 1732.875932 1550.85243 0.658457126 0.72393812 0.684763727 0.692893351 0.681220663 0.830386811 0.822410039 0.530951462 1.11736997 1 10.5988457 -8.274006112 24.98873838 1.058685052 0.710355886 0.740537848 0.084097633 425.9995422 847084.0161 0.077742823 0.020632446 5.32E-09 8.274006112 -0.348329166 KNTFTAWS(ph)DEESDYEIDDRDVNK ddPTM_A459_MK2206_30min_R2 1 KNTFTAWSDEESDYEIDDRDVNK 23 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 KNT(0.026)FT(0.069)AWS(0.788)DEES(0.089)DY(0.029)EIDDRDVNK 40.315 0.044977 6956500 11663 19955 17069 15978 16100 15088 23120 17319 18487 18225 TRUE FALSE 12555.92825 18964.06372 17638.07194 14672.54629 15467.8331 15662.18441 20084.31623 19582.65277 20094.96584 17630.31974 0.712178136 1.075650583 1.000439708 0.832233703 0.877342744 0.888366442 1.139191831 1.110737244 1.139795882 1 14.10577102 -7.258942493 24.97224132 1.106659348 0.906559117 0.498638166 0.097697255 189.0751176 1891019.065 0.038544423 0.028452038 5.51E-08 7.258942493 -0.200100231 KPAATS(ph)PLSPMANGGR ddPTM_A459_MK2206_30min_R2 1 KPAATSPLSPMANGGR 16 1 Q86UU1-3;Q86UU1-2;Q86UU1;A0A087WXY7 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 KPAAT(0.27)S(0.729)PLS(0.001)PMANGGR 77.668 0.014073 14365000 41320 65260 42129 110380 83222 198060 57131 47659 145160 48914 TRUE FALSE 44483.49097 62019.2833 43533.55983 101361.6009 79954.28612 205597.3121 49629.63107 53888.19494 157785.7544 47317.94019 0.940097789 1.310692795 0.920022293 2.142138912 1.68972457 4.345018217 1.048854428 1.138853355 3.334586286 1 15.53009965 -5.766796784 24.51693425 2.138332589 1.082313041 0.1839025 1.004101173 171.4157905 784451.3324 0.28040335 0.430193594 1.71E-06 5.766796784 -1.056019548 KPAFNLSAFGTLS(ph)PSLGNSSILK ddPTM_A459_MK2206_30min_R1 2 KPAFNLSAFGTLSPSLGNSSILK 23 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 KPAFNLSAFGT(0.001)LS(0.98)PS(0.019)LGNSSILK;KPAFNLSAFGT(0.006)LS(0.877)PS(0.116)LGNS(0.001)S(0.001)ILK 113.15 6.47E-06 65570000 12685.9 13789.9 12844.6 10982.1 12565.4 11893.4 12829 12030.9 10975 9973.6 TRUE FALSE 11606.89759 12892.175 11972.74434 11827.94324 12064.89351 12566.79403 11973.20082 11925.71511 12115.89052 11209.20486 1.03547912 1.150141795 1.068117184 1.055199132 1.076338033 1.121113779 1.068157908 1.063921594 1.080887598 1 13.45239632 -10.61443589 0.435106389 0.965944271 1.084751112 0.370131179 0.031257046 19.57756329 2.353824965 0.842748363 0.017651076 2.43E-11 10.61443589 0.118806841 KPALPVS(ph)PAAR ddPTM_A459_MK2206_30min_R1 2 KPALPVSPAAR 11 1 A0A087X0M4;Q9BWU0;A0A087WWF4 A0A087X0M4 SLC4A1AP Kanadaptin 1 KPALPVS(1)PAAR;KPALPVS(1)PAAR 113.95 0.012221 153853000 11465.3 11351.5 10508.3 7987.6 8704.1 8787.7 10523.4 8192.2 8816.1 8601.6 TRUE FALSE 10490.11603 10612.51529 9795.025874 8602.806336 8357.397266 9285.25198 9821.403187 8120.576459 9732.565144 9667.231147 1.085121052 1.097782305 1.013219372 0.889893518 0.864507855 0.960487221 1.0159479 0.840010582 1.006758295 1 13.23888702 -5.504980698 3.741148293 0.934149474 1.088420315 0.526343417 0.057499418 0.164048953 4.961236402 0.015623237 0.0323854 3.13E-06 5.504980698 0.154270841 KPAPPQHFS(ph)PR ddPTM_A459_MK2206_30min_R2 2 KPAPPQHFSPR 11 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 KPAPPQHFS(1)PR;KPAPPQHFS(1)PR 94.551 0.015191 10877700 59850 65721 60220 71711 75319 72264 77392 65677 67830 69843 TRUE FALSE 64432.16202 62457.39071 62227.70474 65851.98191 72361.59761 75014.05716 67230.33744 74261.2094 73729.73079 67564.02863 0.953645946 0.9244178 0.92101827 0.974660381 1.07100774 1.110266198 0.995061112 1.099123467 1.091257172 1 16.04396773 -6.120312216 3.31540825 1.065315222 0.933326076 0.71175047 0.037253731 0.130588469 2.679446915 0.011250678 0.01522593 7.58E-07 6.120312216 -0.131989146 KPASFMTSICDER ddPTM_A459_MK2206_30min_R1 1 KPASFMTSICDER 13 1 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 0 122.18 0.013406 20158000 4227.3 4002.3 3950.9 3368.3 4235.3 3867.8 4436.2 4347.9 3585.2 3440.1 FALSE TRUE 3867.745937 3741.749543 3682.723916 3627.72705 4066.599033 4086.791494 4140.269192 4309.886769 3957.89437 3866.285559 1.000377721 0.967789235 0.952522482 0.938297752 1.051810315 1.057033018 1.070864821 1.114735759 1.023694269 1 11.91673248 -6.312643765 6.994940184 1.060223527 0.96416053 0.642337381 0.032008881 0.145107998 16.80327365 0.009871814 0.011264579 4.87E-07 6.312643765 -0.096062997 KPATPAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLR ddPTM_A459_MK2206_30min_R1 4 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR 32 2 P29692;E9PI39;E9PQ49;E9PK01;P29692-2;E9PRY8;A0A087X1X7;P29692-3;E9PL71;P29692-4;E9PQZ1;H0YE72 P29692 EEF1D Elongation factor 1-delta 1 KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR 130.51 3.62E-19 300604000 24111.1 29513.7 29584.4 23570.3 18717.3 17691.5 22574.3 22692.6 26803 26710.7 TRUE FALSE 22060.32433 27592.35277 27576.29335 25385.68859 17971.75031 18693.17744 21068.40964 22494.20099 29589.26777 30019.82317 0.73485857 0.919137751 0.918602791 0.84563085 0.598662764 0.622694455 0.70181658 0.749311575 0.98565763 1 14.87362786 -10.61557407 7.763297236 1.00000002 0.781911049 0.212527327 0.123170746 4.62E-08 5.41E-09 0.130998859 0.031771887 2.42E-11 10.61557407 -0.218088971 KPATPAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLR ddPTM_A459_MK2206_30min_R2 3 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR 32 2 P29692;E9PI39;E9PQ49;E9PK01;P29692-2;E9PRY8;A0A087X1X7;P29692-3;E9PL71;P29692-4;E9PQZ1;H0YE72 P29692 EEF1D Elongation factor 1-delta 1 KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR 123.03 1.48E-17 144437000 266152 274511 242952 241306 273428 166474 305823 224051 206288 305861 TRUE FALSE 286528.8018 260879.1829 251051.8984 221590.5279 262691.8429 172809.2847 265668.0727 253335.235 224230.5574 295880.7806 0.968392746 0.881703713 0.84849005 0.748918289 0.887830032 0.584050388 0.897888914 0.856207133 0.757840901 1 18.17465646 -4.913607357 1.623220254 0.809595311 0.999706459 0.151929545 0.105102763 1.316946419 4.137507275 0.028474115 0.368114305 1.22E-05 4.913607357 0.190111148 KPATPAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLREER ddPTM_A459_MK2206_30min_R1 2 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREER 35 3 P29692;E9PI39;E9PQ49;E9PK01;P29692-2;E9PRY8;A0A087X1X7;P29692-3;E9PL71;P29692-4;E9PQZ1;H0YE72 P29692 EEF1D Elongation factor 1-delta 1 KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER 61.738 0.00017215 19196700 4562.6 5388.6 5706.4 8036.5 5244.9 3890.1 2859.43 5082.4 2104.3 1000.79 TRUE FALSE 4174.526911 5037.801161 5319.065467 8655.472622 5035.984527 4110.3541 2668.682642 5037.965113 2323.049515 1124.775421 3.711431486 4.478939589 4.729002225 7.695289622 4.477324481 3.654377598 2.372635988 4.479085353 2.065345199 1 10.13542126 -7.998836852 0.609097141 1.117461799 5.067951439 0.519652031 1.206195993 0.654623981 0.537654504 1.271004581 0.646014234 1.00E-08 7.998836852 3.95048964 KPDAEVLTVES(ph)PEEEAMTK ddPTM_A459_MK2206_30min_R1 1 KPDAEVLTVESPEEEAMTK 19 1 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 KPDAEVLTVES(0.999)PEEEAMT(0.001)K 100.62 0.0025344 0 2547.8 2230.5 1989.9 1829.7 1796.8 1334.9 1884.7 2140 1444.2 1445.4 TRUE FALSE 2331.096231 2085.294045 1854.831132 1970.623811 1725.229651 1410.480884 1758.975102 2121.290206 1594.329758 1624.467064 1.434991378 1.28367887 1.141809011 1.213089421 1.062028089 0.868272996 1.082801333 1.30583762 0.981447881 1 10.66575078 -4.718600296 0.830903789 1.065805447 1.679196322 0.544309609 0.110586204 2.301373969 1.140306821 0.043758525 1.335511584 1.91E-05 4.718600296 0.613390875 KPDAEVLTVES(ph)PEEEAMTK ddPTM_A459_MK2206_30min_R2 1 KPDAEVLTVESPEEEAMTK 19 1 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 KPDAEVLTVES(0.999)PEEEAMT(0.001)K 72.513 0.009019 3520400 26778 24455 23894 20120 16167 14075 19157 13845 15473 17831 TRUE FALSE 28828.14427 23240.60026 24690.61403 18476.13164 15532.20235 14610.63399 16641.66289 15654.58904 16818.81357 17249.17593 1.67127661 1.34734554 1.431408325 1.071131265 0.900460544 0.847033739 0.96478017 0.907555764 0.975050266 1 14.07423982 -5.78819499 1.971230362 0.922595537 1.511295775 0.897262673 0.083681067 0.092473926 0.733781037 0.025058013 0.04845762 1.63E-06 5.78819499 0.588700239 KPDGVKES(ph)TESSNTTIEDEDVK ddPTM_A459_MK2206_30min_R2 2 KPDGVKESTESSNTTIEDEDVK 22 2 H0Y9J2;D6R938;Q13557-8;Q13557-12;Q13557 H0Y9J2 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 KPDGVKES(0.459)T(0.459)ES(0.059)S(0.02)NT(0.002)T(0.002)IEDEDVK;KPDGVKES(0.772)T(0.226)ES(0.001)SNTTIEDEDVK 99.569 0.0008445 0 25449 21310 25625 15019.1 14188.6 8001.7 24378.1 12510.8 16405.7 14688.6 TRUE FALSE 27397.39501 20251.77639 26479.32471 13791.99149 13631.48427 8306.210301 21177.22619 14146.00452 17832.63813 14209.31218 1.928129571 1.425246776 1.863519104 0.970630479 0.959334561 0.584561039 1.490376586 0.995544635 1.254996575 1 13.7945491 -5.766281249 24.99999825 1.033172784 1.707593363 0.62345754 0.249808424 77.8401579 401914.3663 0.069336945 0.106667472 1.71E-06 5.766281249 0.674420578 KPDPY(ph)ELYEKS(ph)RAIY(ph)ES(ph)PDYK ddPTM_A459_MK2206_30min_R2 1 KPDPYELYEKSRAIYESPDYK 21 3 A0A1B0GVS6;A0A0D9SFP3 A0A1B0GVS6 MAGI2 4 KPDPY(0.869)ELY(0.287)EKS(0.844)RAIY(0.967)ES(0.546)PDY(0.487)K 51.487 0.019849 15342000 24709 39823 26752 49803 43924 27664 39324 33540 29040 30935 TRUE FALSE 26600.74004 37845.44773 27643.89833 45733.93559 42199.32306 28716.77291 34160.71156 37923.79316 31565.84671 29925.59348 0.88889599 1.264651535 0.923754389 1.528254924 1.410141559 0.959605794 1.141521607 1.267269542 1.054811051 1 14.86909224 -8.459383808 5.809177724 1.000415493 1.178989922 0.082610198 0.197344828 0.492076096 30.95531071 0.190997272 0.049540965 3.47E-09 8.459383808 0.17857443 KPEDWDEEMDGEWEPPVIQNPEYK ddPTM_A459_MK2206_30min_R1 1 KPEDWDEEMDGEWEPPVIQNPEYK 24 1 P27797;K7EJB9;K7EL50 P27797 CALR Calreticulin 0 131.56 1.62E-06 0 676.93 414.57 703.6 358.96 514.1 562.98 422.31 534.4 521.43 623.44 FALSE TRUE 619.3535488 387.5814176 655.8415923 386.6071614 493.6223084 594.8554411 394.1384704 529.7277971 575.6345145 700.6764539 0.883936581 0.553153193 0.936012033 0.551762742 0.70449393 0.848973071 0.562511368 0.756023403 0.821541114 1 9.452604605 -8.59632339 2.132379747 0.998732151 0.717861621 0.292534838 0.131346995 0.466289683 4.785651458 0.116548561 0.032175348 2.53E-09 8.59632339 -0.28087053 KPEEMPTACPGHS(ph)PR ddPTM_A459_MK2206_30min_R2 2 KPEEMPTACPGHSPR 15 1 C9J8F8;C9J6I8;Q9NZC9 C9J8F8 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 1 KPEEMPTACPGHS(1)PR;KPEEMPT(0.007)ACPGHS(0.993)PR 93.776 0.0062245 9814700 25484 24890 26403 30731 25377 20783 30685 24523 26320 26948 TRUE FALSE 27435.07463 23653.99879 27283.26284 28220.179 24380.57147 21573.91163 26656.02264 27728.2403 28609.26602 26068.68897 1.052414821 0.907372013 1.046591291 1.082531578 0.935243483 0.827579463 1.022530234 1.063660713 1.097457032 1 14.67003041 -7.516838587 24.62263508 1.056954453 0.974043588 0.185701882 0.074502612 397.0506806 1618596.388 0.035917172 0.021644698 3.04E-08 7.516838587 -0.082910865 KPEKPLFSSAS(ph)PQDSSPR ddPTM_A459_MK2206_30min_R1 2 KPEKPLFSSASPQDSSPR 18 2 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 KPEKPLFS(0.01)S(0.059)AS(0.579)PQDS(0.106)S(0.245)PR;KPEKPLFS(0.032)S(0.147)AS(0.683)PQDS(0.079)S(0.058)PR 59.574 0.020503 23521000 6634.9 5100.2 5934.2 5603.3 5954.7 5711.9 5102.9 6240.6 4234 3931.5 TRUE FALSE 6070.566914 4768.176053 5531.403038 6034.867137 5717.51169 6035.302842 4762.494852 6186.039092 4674.139452 4418.563901 1.373877814 1.07912348 1.25185539 1.365798316 1.293975105 1.365896924 1.077837722 1.400011232 1.057841316 1 12.10936183 -8.418407918 5.791236661 1.001831699 1.268138484 0.449398631 0.109916409 0.191075909 8.133918508 0.101923802 0.026447255 3.82E-09 8.418407918 0.266306785 KPEKPLFSSASPQDS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 KPEKPLFSSASPQDSSPR 18 2 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 KPEKPLFS(0.025)S(0.167)AS(0.256)PQDS(0.441)S(0.111)PR 76.156 0.016771 12221000 2562.2 2855.3 2508.1 2787 2830.5 2548.6 2184.1 2649.5 2296.8 2073.4 TRUE FALSE 2344.271435 2669.419451 2337.85716 3001.655223 2717.755191 2692.89953 2038.402674 2626.335701 2535.560579 2330.268445 1.006009175 1.145541603 1.003256584 1.288115637 1.166284166 1.155617729 0.874750151 1.127052854 1.088098062 1 11.18628045 KPEKPLFSSASPQDSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 KPEKPLFSSASPQDSSPR 18 2 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 KPEKPLFS(0.001)S(0.076)AS(0.307)PQDS(0.161)S(0.455)PR 64.5 0.013773 24660000 81816 86084 79751 93904 84789 75927 97667 69052 76521 80857 TRUE FALSE 88079.89587 81809.19374 82409.85854 86231.74282 81459.75783 78816.45519 84843.20558 78077.33349 83176.65826 78218.64271 1.126072926 1.045904031 1.053583336 1.102444888 1.041436606 1.007642839 1.08469289 0.998193407 1.063386622 1 16.25522488 -1.522878745 0.152181224 1.000735668 1.3501339 0.372445846 0.032611399 77.80775148 0.776316832 0.108806512 6.018953727 0.03 1.522878745 0.349398232 KPENEVAQNGGAETSHTEPVS(ph)PIPK ddPTM_A459_MK2206_30min_R2 3 KPENEVAQNGGAETSHTEPVSPIPK 25 1 O95104-2;O95104-3;O95104 O95104-2 SCAF4 "Splicing factor, arginine/serine-rich 15" 1 KPENEVAQNGGAETSHT(0.033)EPVS(0.967)PIPK;KPENEVAQNGGAET(0.012)S(0.012)HT(0.033)EPVS(0.944)PIPK;KPENEVAQNGGAETSHT(0.008)EPVS(0.992)PIPK 204.05 5.69E-41 43862000 174146 74482.2 101302 73213.6 62384.3 47978.5 113556 82355 54505.2 138783 TRUE FALSE 187478.7517 70783.52226 104679.3581 67231.81468 59934.77893 49804.35544 98645.96079 93119.08127 59245.96377 134254.5221 1.396442732 0.527233803 0.779708247 0.500778772 0.446426519 0.370969668 0.734768254 0.693601078 0.441295853 1 17.03461116 -4.758537544 24.99616224 0.594081189 1.396443818 0.621526236 0.183581744 50.47281222 434689.0997 0.044099198 0.299959894 1.74E-05 4.758537544 0.802362629 KPESAAGSQS(ph)PALPPR ddPTM_A459_MK2206_30min_R1 2 KPESAAGSQSPALPPR 16 1 Q02297-2;Q02297-6;Q02297;Q02297-7;Q02297-12;Q02297-3;A0A494C0K4;A0A494C114;Q02297-8;Q02297-4 Q02297-2 NRG1 "Pro-neuregulin-1, membrane-bound isoform;Neuregulin-1" 1 KPESAAGS(0.056)QS(0.944)PALPPR;KPES(0.002)AAGS(0.055)QS(0.942)PALPPR 101.61 0.0067808 4284200 3651.2 3165.7 3049.7 3631.1 2986.4 3488.5 3179.3 2872.9 2413.2 2403.4 TRUE FALSE 3340.646267 2959.612355 2842.694861 3910.767951 2867.445364 3686.015855 2967.214698 2847.782538 2664.060776 2701.151337 1.236749019 1.095685501 1.052401183 1.447815196 1.061564128 1.364609159 1.098499983 1.054284704 0.986268611 1 11.39935876 -7.60769774 3.298473271 1.013284191 1.203267205 0.346791931 0.120597607 0.292208671 6.33517519 0.06222967 0.033310967 2.47E-08 7.60769774 0.189983014 KPESPYGNLCDAPDS(ph)PRPVK ddPTM_A459_MK2206_30min_R2 2 KPESPYGNLCDAPDSPRPVK 20 2 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 KPESPYGNLCDAPDS(1)PRPVK;KPESPYGNLCDAPDS(1)PRPVK 91.616 0.00059446 13599000 156261 191950 151691 162090 176254 135072 156569 113254 123929 153976 TRUE FALSE 168224.4623 182418.0421 156748.3022 148846.7285 169333.3824 140212.2596 136011.3022 128056.6867 134708.1204 148951.7757 1.129388767 1.224678533 1.052342622 0.999294757 1.136833593 0.94132654 0.913123067 0.859719101 0.904374048 1 17.1844858 -6.289892028 0.70103102 0.90049249 1.173822817 0.637042448 0.067600179 0.492494049 0.522262069 0.043382921 0.076335419 5.13E-07 6.289892028 0.273330327 KPGDGEVS(ph)PSTEDAPFQHSPLGK ddPTM_A459_MK2206_30min_R2 3 KPGDGEVSPSTEDAPFQHSPLGK 23 1 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 KPGDGEVS(0.872)PS(0.064)T(0.064)EDAPFQHSPLGK;KPGDGEVS(0.902)PS(0.071)T(0.027)EDAPFQHSPLGK;KPGDGEVS(0.784)PS(0.093)T(0.123)EDAPFQHS(0.001)PLGK 70.959 0.011787 18590100 137575 168943 140779 173162 161827 122979 168461 135197 140654 154569 TRUE FALSE 148107.8478 160553.5363 145472.5016 159014.1107 155472.8589 127659.052 146341.8683 152867.7121 152887.8307 149525.4262 0.990519483 1.073754079 0.972894746 1.063458669 1.039775394 0.853761499 0.97870892 1.022352626 1.022487175 1 17.1900313 KPGPPLS(ph)PEIR ddPTM_A459_MK2206_30min_R1 1 KPGPPLSPEIR 11 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPGPPLS(1)PEIR 80.719 0.022204 62259000 4447.5 4615.8 4321.7 3587.2 4356.4 4191.9 5274.1 4004.3 4561.2 5012.4 TRUE FALSE 4069.21677 4315.310581 4028.355045 3863.486766 4182.875363 4429.241755 4922.274412 3969.290827 5035.353062 5633.373954 0.722340964 0.76602594 0.715087455 0.685821108 0.7425169 0.786250263 0.873770222 0.704602758 0.893843211 1 12.45978353 -8.940789284 0.376468625 1.030245564 0.716136891 0.713246136 0.051660717 1.290859556 0.379012857 0.12454613 0.044362752 1.15E-09 8.940789284 -0.314108673 KPGPPLS(ph)PEIR ddPTM_A459_MK2206_30min_R2 3 KPGPPLSPEIR 11 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPGPPLS(1)PEIR;KPGPPLS(1)PEIR;KPGPPLS(1)PEIR 78.615 0.024255 171606000 176620 148509 148413 181468 140425 152440 166293 129656 122326 162805 TRUE FALSE 190142.163 141134.259 153361.0153 166641.4839 134911.2089 158241.211 144458.5293 146602.4844 132965.6944 157492.6862 1.207307892 0.896132147 0.973765951 1.058090302 0.856618883 1.004752759 0.917239606 0.930852651 0.844265836 1 17.26492531 -4.755143231 24.93239832 0.943327325 1.207308346 0.60355259 0.064402679 138.2528259 547419.5843 0.015579096 0.142140343 1.76E-05 4.755143231 0.263981021 KPGPSGPS(ph)ESPK ddPTM_A459_MK2206_30min_R1 1 KPGPSGPSESPK 12 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPGPS(0.027)GPS(0.671)ES(0.302)PK 93.716 0.035766 18308000 6509.6 9134 8474.7 7220.4 4182.1 3979.9 5004.4 5053.2 6774 6819.5 TRUE FALSE 5955.924337 8539.37494 7899.460976 7776.516459 4015.518101 4205.238499 4670.565607 5009.020405 7478.181541 7664.351145 0.777094398 1.11416802 1.030675765 1.014634678 0.523921468 0.548675083 0.60938826 0.653547875 0.975709672 1 12.90394794 -6.243156894 24.23364834 0.687266917 0.996754504 0.353610479 0.172510746 543.054634 719824.5462 0.050790137 0.065424637 5.71E-07 6.243156894 0.309487588 KPGPSGPSES(ph)PK ddPTM_A459_MK2206_30min_R1 1 KPGPSGPSESPK 12 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPGPS(0.005)GPS(0.09)ES(0.905)PK 93.909 0.035292 31653000 4691.8 5998.5 5797 5000.7 2818.1 2311.2 3319.7 2994.8 4131.4 4217.3 TRUE FALSE 4292.737772 5607.99656 5403.515791 5385.85478 2705.84911 2442.058147 3098.24887 2968.616779 4560.873814 4739.770963 0.905684643 1.183178808 1.140037321 1.136311189 0.570881828 0.515227036 0.653670588 0.626320724 0.962256162 1 12.21060163 -6.254327332 24.97611364 0.689014366 1.101346595 0.545158172 0.163832167 385.5193645 1353867.404 0.048432206 0.061198547 5.57E-07 6.254327332 0.412332229 KPGPSGPSES(ph)PK ddPTM_A459_MK2206_30min_R2 3 KPGPSGPSESPK 12 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPGPS(0.008)GPS(0.12)ES(0.872)PK;KPGPS(0.005)GPS(0.142)ES(0.853)PK;KPGPS(0.007)GPS(0.166)ES(0.827)PK 96.707 0.025486 151187300 480906 405827 521228 359408 397643 268115 453130 322549 290686 489403 TRUE FALSE 517724.5331 385674.2213 538605.4814 330043.2167 382029.5378 278318.3042 393633.4867 364707.2618 315969.3428 473433.8202 1.093552068 0.81463175 1.137657384 0.697126404 0.806933349 0.587871614 0.83144353 0.770344758 0.667399179 1 18.85280324 -5.774395003 24.99999986 0.753331217 0.995215554 0.429274961 0.130614012 197.9368689 381951.343 0.034236075 0.051137533 1.68E-06 5.774395003 0.241884337 KPIDSLRDS(ph)R ddPTM_A459_MK2206_30min_R1 2 KPIDSLRDSR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 KPIDSLRDS(1)R;KPIDS(0.09)LRDS(0.91)R 101.61 0.018284 151177000 7112.7 7730.4 7210.5 5055.1 5906.6 6704.1 9544.7 7245.4 9289.6 12782.4 TRUE FALSE 6507.727515 7227.149555 6721.07135 5444.444678 5671.327615 7083.680348 8907.990478 7182.054232 10255.28716 14365.98021 0.452995718 0.50307389 0.467846346 0.378981775 0.394774845 0.493087157 0.620075369 0.499934855 0.713859201 1 13.81036881 -8.712565239 0.673337965 1.007324499 0.443752009 0.898568249 0.056223709 0.306695775 0.296241912 0.06184761 0.023699524 1.94E-09 8.712565239 -0.563572489 down KPIDSLRDS(ph)R ddPTM_A459_MK2206_30min_R2 2 KPIDSLRDSR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 KPIDS(0.001)LRDS(0.999)R;KPIDS(0.007)LRDS(0.993)R 93.228 0.028841 108502000 270364 202102 221974 251170 171653 173309 222873 188222 164257 268793 TRUE FALSE 291063.2757 192065.9086 229374.5024 230648.6075 164913.0407 179904.3954 193609.5074 212823.2617 178543.777 260022.3064 1.119378102 0.738651661 0.882133943 0.887033927 0.634226513 0.691880623 0.74458807 0.818480786 0.686647924 1 17.98827587 -4.757368948 24.9997739 0.778414808 1.119378597 0.466944632 0.106153672 105.6241808 648634.9706 0.026086365 0.19499041 1.75E-05 4.757368948 0.340963789 KPIETGS(ph)PK ddPTM_A459_MK2206_30min_R1 1 KPIETGSPK 9 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 KPIET(0.048)GS(0.952)PK 70.54 0.037507 228740000 5513.8 6662.4 5960.1 6646.1 2301.7 2420 4541.9 5954.4 742.51 3967.4 TRUE FALSE 5044.822356 6228.676549 5555.545018 7157.983774 2210.018415 2557.018309 4238.918138 5902.341309 819.6965716 4458.911464 1.131402226 1.396905186 1.245941989 1.605320902 0.495640793 0.573462454 0.9506621 1.323717987 0.183833336 1 12.12247584 -6.260703734 24.99931172 0.771489627 1.341539864 0.46099712 0.312388524 64.44840902 2190136.044 0.094168989 0.114436885 5.49E-07 6.260703734 0.570050237 KPIETGS(ph)PK ddPTM_A459_MK2206_30min_R2 3 KPIETGSPK 9 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 KPIET(0.136)GS(0.864)PK;KPIET(0.009)GS(0.991)PK;KPIET(0.006)GS(0.994)PK 92.781 0.017478 108548200 388073 546271 364196 346244 307502 211877 361104 315324 269283 418262 TRUE FALSE 417784.1673 519143.9765 376338.1129 317954.7576 295427.9264 219940.1277 313690.611 356537.9295 292704.7486 404614.1452 1.032549584 1.283059385 0.930116056 0.78582215 0.730147302 0.543579927 0.775283353 0.881180091 0.723416994 1 18.62618723 -5.525450699 3.216607547 0.760878504 1.156677202 0.591029263 0.124877775 0.153696424 3.275811104 0.034491313 0.072406902 2.98E-06 5.525450699 0.395798698 KPISDNS(ph)FSSDEEQSTGPIK ddPTM_A459_MK2206_30min_R1 1 KPISDNSFSSDEEQSTGPIK 20 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 KPIS(0.089)DNS(0.378)FS(0.297)S(0.235)DEEQS(0.001)TGPIK 60.991 0.014222 7737600 2759.9 2937.2 2685.2 2920.3 2795.4 2792.8 2080.4 2711.4 2989.6 2119.7 TRUE FALSE 2525.156012 2745.987746 2502.936105 3145.222012 2684.053299 2950.925923 1941.620312 2687.694516 3300.379618 2382.304439 1.05996361 1.152660299 1.050636545 1.320243526 1.126662594 1.238685482 0.815017712 1.128191037 1.385372736 1 11.21814207 KPISDNSFS(ph)SDEEQSTGPIK ddPTM_A459_MK2206_30min_R1 1 KPISDNSFSSDEEQSTGPIK 20 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 KPIS(0.001)DNS(0.006)FS(0.923)S(0.07)DEEQSTGPIK 73.76 0.02918 0 3019.3 3007.1 3127.9 2753.9 2759.8 2464.4 2548.4 2577.1 2319.5 2297.4 TRUE FALSE 2762.49268 2811.337243 2915.586863 2966.005855 2649.871322 2603.932198 2378.400886 2554.568686 2560.620325 2582.019256 1.069896235 1.08881343 1.129188659 1.148715622 1.026278683 1.008486746 0.921139871 0.989368565 0.991712327 1 11.33428404 -6.534945887 2.744818062 0.977058524 1.108660584 0.791791737 0.030536177 0.122770275 1.875836664 0.01114226 0.011809353 2.92E-07 6.534945887 0.13160206 KPLAAPGDGEGLGQTAQPS(ph)PPAR ddPTM_A459_MK2206_30min_R1 2 KPLAAPGDGEGLGQTAQPSPPAR 23 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 KPLAAPGDGEGLGQTAQPS(1)PPAR;KPLAAPGDGEGLGQT(0.097)AQPS(0.903)PPAR 120.4 5.44E-06 7216900 3880.7 3410.4 3090.7 2545.5 3395.1 3492.6 3933.1 3193.2 2687.4 2808.7 TRUE FALSE 3550.626087 3188.38234 2880.911895 2741.554851 3259.865978 3690.347994 3670.730075 3165.282189 2966.764847 3156.662961 1.124803671 1.01004839 0.912644755 0.868497805 1.032693708 1.169066207 1.162851442 1.002730487 0.939842132 1 11.62418452 -6.512833036 24.84696796 1.066156258 0.973241779 0.127384505 0.091249212 856.7473018 2119076.406 0.031887712 0.033808255 3.07E-07 6.512833036 -0.092914479 KPLAAPGDGEGLGQTAQPS(ph)PPAR ddPTM_A459_MK2206_30min_R2 2 KPLAAPGDGEGLGQTAQPSPPAR 23 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 KPLAAPGDGEGLGQTAQPS(1)PPAR;KPLAAPGDGEGLGQT(0.001)AQPS(0.999)PPAR 162.81 2.88E-10 27534000 69581 80738 76525 88438 76632 77217 85477 75558 79160 83374 TRUE FALSE 74908.17486 76728.66832 79076.30531 81212.3325 73623.04264 80155.54704 74253.76722 85433.69003 86045.19371 80653.51321 0.928765182 0.951336963 0.980444647 1.006928642 0.912831192 0.993825859 0.920651367 1.059268055 1.066849915 1 16.29944976 -7.772052096 24.99978025 1.047294271 0.95883534 0.574800266 0.033617931 147.1016718 346513.4817 0.017515767 0.008550633 1.69E-08 7.772052096 -0.088458931 KPLFHGDSEIDQLFR ddPTM_A459_MK2206_30min_R1 1 KPLFHGDSEIDQLFR 15 1 A0A087WZZ9;P06493;A0A024QZP7;P06493-2 A0A087WZZ9 CDK1;CDC2 Cyclin-dependent kinase 1 0 86.738 0.013076 7259100 5510.8 5218.9 5664.7 4805.8 5598.8 5330.8 6088.1 5005.1 4305.2 4135.1 FALSE TRUE 5042.077522 4879.148661 5280.195947 5175.943549 5375.78794 5632.625289 5681.973957 4961.340938 4752.740946 4647.387406 1.084927311 1.049869149 1.136164362 1.113731888 1.156733336 1.211998225 1.222616808 1.067554844 1.022669412 1 12.1822042 -7.991669172 24.00614839 1.022593813 1.138814015 0.522317755 0.049660371 101.9636386 293818.6128 0.031270199 0.01497528 1.02E-08 7.991669172 0.116220202 KPLSLAGDEETECQS(ph)SPK ddPTM_A459_MK2206_30min_R1 2 KPLSLAGDEETECQSSPK 18 1 F5H1K3;Q86TN4-2;Q86TN4;Q86TN4-4 F5H1K3 TRPT1 tRNA 2-phosphotransferase 1 1 KPLSLAGDEETECQS(0.604)S(0.396)PK;KPLSLAGDEETECQS(0.546)S(0.454)PK 120.52 0.00048852 43963000 9086.6 12444.3 12659.5 10096.2 7377.9 6930.4 8092.8 8819.3 11123.9 9902.1 TRUE FALSE 8313.736954 11634.17381 11800.20841 10873.81107 7084.02262 7322.793259 7552.944078 8742.19379 12280.26921 11128.84691 0.747043878 1.045406942 1.060326242 0.977083355 0.636545967 0.658001078 0.678681641 0.78554354 1.103462858 1 13.4420165 -6.224170338 23.76770002 0.785446563 0.971094004 0.154000689 0.161461819 499.5582486 318583.9563 0.049005684 0.06326371 5.97E-07 6.224170338 0.18564744 KPLSLAGDEETECQS(ph)SPK ddPTM_A459_MK2206_30min_R2 3 KPLSLAGDEETECQSSPK 18 1 F5H1K3;Q86TN4-2;Q86TN4;Q86TN4-4 F5H1K3 TRPT1 tRNA 2-phosphotransferase 1 1 KPLSLAGDEETECQS(0.702)S(0.298)PK;KPLSLAGDEETECQS(0.5)S(0.5)PK;KPLSLAGDEETECQS(0.678)S(0.322)PK 180.8 6.46E-10 52869200 271212 266060 264413 229613 202290 156138 276756 226359 183739 277431 TRUE FALSE 291976.1992 252847.8473 273228.3975 210852.8834 194347.0782 162079.941 240417.6048 255944.8985 199720.2861 268378.4492 1.087927142 0.94213171 1.018071303 0.785655048 0.724153071 0.603923085 0.895815612 0.953671576 0.744174082 1 18.0339093 -5.759893709 24.97287494 0.804155852 1.008652263 0.390617026 0.114167996 42.34670868 684153.8455 0.032710148 0.053007163 1.74E-06 5.759893709 0.204496411 KPLSLAGDEETECQSS(ph)PK ddPTM_A459_MK2206_30min_R2 1 KPLSLAGDEETECQSSPK 18 1 F5H1K3;Q86TN4-2;Q86TN4;Q86TN4-4 F5H1K3 TRPT1 tRNA 2-phosphotransferase 1 1 KPLSLAGDEETECQS(0.228)S(0.772)PK 144.5 0.00014596 8950400 75704 71209 68876 56797 60092 42601 78680 59792 51115 72442 TRUE FALSE 81499.95645 67672.86461 71172.29146 52156.50342 57732.48614 44222.21091 68349.22149 67607.0197 55560.89031 70078.22347 1.162985481 0.965676087 1.015612097 0.74426121 0.823829191 0.631040696 0.975327543 0.964736495 0.792841022 1 16.09667858 -4.98155016 1.308986092 0.846643688 1.209044843 0.388949633 0.115945029 1.01509439 1.986953162 0.03590767 0.448392239 1.04E-05 4.98155016 0.362401155 KPLT(ph)SSSAAPQRPISTQR ddPTM_A459_MK2206_30min_R1 1 KPLTSSSAAPQRPISTQR 18 2 Q15691 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 1 KPLT(0.716)S(0.253)S(0.024)S(0.007)AAPQRPISTQR 103.28 0.0068089 66219000 3046.9 2447 2931.8 2138.9 2630 1667.5 1900.1 2107.2 1558.9 1449.2 TRUE FALSE 2787.745155 2287.699855 2732.797584 2303.638449 2525.241531 1761.912409 1773.347796 2088.776973 1720.953234 1628.737837 1.711598449 1.40458446 1.67786216 1.414370316 1.550428481 1.081765505 1.088786517 1.28245131 1.056617704 1 10.66953869 -6.759017167 24.99985362 1.118756271 1.542963867 0.795733038 0.113755401 28.34045612 292504.5571 0.036446511 0.034822397 1.74E-07 6.759017167 0.424207596 KPLTSNCTIQIAT(ph)PGK ddPTM_A459_MK2206_30min_R2 1 KPLTSNCTIQIATPGK 16 1 Q15061;C9IZK7 Q15061 WDR43 WD repeat-containing protein 43 1 KPLTSNCTIQIAT(1)PGK 115.1 0.0025295 5636600 39589 40122 35735 32447 35672 33653 47781 35156 33314 46174 TRUE FALSE 42619.96428 38129.59982 36926.38706 29795.97631 34271.33804 34933.6885 41507.2973 39751.00991 36211.5915 44667.34616 0.954163789 0.853634771 0.826697582 0.667063949 0.76725709 0.782085606 0.929253714 0.889934445 0.81069494 1 15.44693292 -10.47938307 6.845531554 1.000000012 0.828184847 0.289780307 0.07915283 1.63E-08 2.55E-09 0.083751761 0.020312784 3.32E-11 10.47938307 -0.171815165 KPNIFYSGPAS(ph)PARPR ddPTM_A459_MK2206_30min_R1 1 KPNIFYSGPASPARPR 16 2 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 KPNIFYSGPAS(1)PARPR 144.73 0.012687 9820300 3355.7 2804 2826.7 2489.3 3403.4 2781.9 3195.6 2876.5 2697.2 2594.4 TRUE FALSE 3070.280094 2621.45909 2634.83148 2681.026317 3267.835371 2939.408774 2982.427355 2851.351064 2977.583592 2915.813859 1.052975341 0.899048848 0.903635008 0.91947787 1.12072839 1.008092051 1.022845593 0.977892006 1.021184388 1 11.50968291 -6.203626503 24.9999954 1.023053257 0.93772102 0.354386585 0.053490734 299.3539707 129449.0902 0.015793826 0.020389737 6.26E-07 6.203626503 -0.085332237 KPNIFYSGPAS(ph)PARPR ddPTM_A459_MK2206_30min_R2 2 KPNIFYSGPASPARPR 16 2 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 KPNIFYS(0.006)GPAS(0.994)PARPR;KPNIFYS(0.004)GPAS(0.996)PARPR 75.017 0.012333 119570000 104693 143005 129007 145553 150849 130466 144525 108240 124109 123214 TRUE FALSE 112708.3766 135903.5796 133308.029 133660.8543 144925.9103 135430.9751 125548.6939 122387.3396 134903.7765 119193.5373 0.94559134 1.14019252 1.118416586 1.12137669 1.215887318 1.136227502 1.053317963 1.026795097 1.131804455 1 16.86294649 -10.01851036 7.80837117 1.000004017 1.102383591 0.148828615 0.070460109 0 0 0.06995361 0.016966243 9.58E-11 10.01851036 0.102379573 KPNVS(ph)PEK ddPTM_A459_MK2206_30min_R2 1 KPNVSPEK 8 1 A0A0U1RR07;Q9HCH5-15;Q9HCH5-14;Q9HCH5-6;Q9HCH5;Q9HCH5-13 A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 KPNVS(1)PEK 65.695 0.043209 12048000 160490 158210 161590 142690 126020 80011 151080 150130 124090 163700 TRUE FALSE 172777.2378 150353.5215 166977.3299 131031.7706 121071.8216 83055.87467 131243.0145 169752.5065 134883.1239 158358.4824 1.091051361 0.949450381 1.054426182 0.82743765 0.764542699 0.524480113 0.828771611 1.071950829 0.851758124 1 17.27283462 -5.76760899 24.04093413 0.824856967 1.023423434 0.280438253 0.140480217 123.0151207 479353.2001 0.042891297 0.065547185 1.71E-06 5.76760899 0.198566467 KPPAPPS(ph)PVQS(ph)QSPSTNWSPAVPVK ddPTM_A459_MK2206_30min_R2 1 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 KPPAPPS(0.897)PVQS(0.479)QS(0.443)PS(0.082)T(0.098)NWSPAVPVK 67.283 0.0044599 22144000 96213 100200 83887 94006 82719 78083 96182 82745 73627 93932 TRUE FALSE 103579.1413 95224.2137 86683.75071 86325.40909 79471.03643 81054.50328 83553.18786 93560.05561 80030.94337 90867.00653 1.139898245 1.047951477 0.953962874 0.950019291 0.874586271 0.892012474 0.919510734 1.02963726 0.8807481 1 16.47146893 -4.981207739 1.612912576 0.931229355 1.173946706 0.662745918 0.047086947 0.41229584 1.38972784 0.013599779 0.140402934 1.04E-05 4.981207739 0.242717351 KPPAPPS(ph)PVQSQS(ph)PSTNWSPAVPVK ddPTM_A459_MK2206_30min_R1 1 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 KPPAPPS(0.856)PVQS(0.245)QS(0.585)PS(0.16)T(0.15)NWS(0.004)PAVPVK 60.876 0.015543 15314000 4914.2 5105.3 5774.6 4169.7 5352.9 4654.7 5581.8 4424.1 5144.4 5405.9 TRUE FALSE 4496.221485 4772.944042 5382.636241 4490.851016 5139.682658 4918.245091 5209.448307 4385.42056 5679.178789 6075.623704 0.740042785 0.785589147 0.8859397 0.739158848 0.845951446 0.80950456 0.857434324 0.721805822 0.934748277 1 12.5688168 -8.460476346 5.198539106 0.99935881 0.803118828 0.639770958 0.051773417 0.110070731 5.668670018 0.047417142 0.012327694 3.46E-09 8.460476346 -0.196239982 KPPAPPS(ph)PVQSQSPSTNWS(ph)PAVPVK ddPTM_A459_MK2206_30min_R2 1 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 KPPAPPS(0.76)PVQS(0.12)QS(0.127)PS(0.237)T(0.237)NWS(0.518)PAVPVK 70.154 0.0029323 6423900 59237 51114 47227 62750 52159 52322 60356 54872 44707 64926 TRUE FALSE 63772.23027 48575.75309 48801.52461 57623.12427 50110.97558 54313.15037 52431.1847 62043.9588 48595.53405 62807.46994 1.015360598 0.773407258 0.777001918 0.917456543 0.797850568 0.864756221 0.834792179 0.987843625 0.773722204 1 15.93864853 -14.52287875 0.353446329 2.671463051 0.854045327 0.190771562 0.084248957 724.5153095 5.88445653 918.9072323 0.060602218 3.00E-15 14.52287875 -1.817417724 KPPAPPS(ph)PVQSQSPSTNWSPAVPVK ddPTM_A459_MK2206_30min_R1 1 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KPPAPPS(0.99)PVQS(0.007)QS(0.002)PSTNWSPAVPVK 74.474 0.00016801 12917000 3005.3 3308.4 3350.6 3095.1 3347 2673.2 3592.5 2577.9 2879.1 2921.7 TRUE FALSE 2749.683454 3093.022559 3123.170607 3333.485138 3213.681903 2824.554274 3352.85088 2555.361692 3178.392748 3283.662254 0.837383154 0.941942965 0.951124192 1.015172963 0.978688322 0.860184165 1.021070567 0.778204789 0.967941433 1 11.68109003 -5.282669294 0.0039104 1.854165868 2.18E-07 0.034991957 0.076770216 274636.8234 198.3499731 45905.25273 48160.28762 5.22E-06 5.282669294 -1.85416565 KPPAPPS(ph)PVQSQSPSTNWSPAVPVK ddPTM_A459_MK2206_30min_R2 2 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KPPAPPS(0.942)PVQS(0.046)QS(0.009)PS(0.002)T(0.002)NWSPAVPVK;KPPAPPS(0.999)PVQS(0.001)QSPSTNWSPAVPVK 71.118 0.00050717 36456000 294210 268670 283870 329850 283550 266020 370810 271750 227380 334440 TRUE FALSE 316734.9438 255328.2385 293334.0841 302900.1999 272416.4023 276143.5775 322122.2016 307268.6581 247157.1014 323527.2502 0.979005458 0.789201646 0.906675045 0.936243237 0.84201996 0.853540397 0.995657093 0.949745834 0.763945236 1 18.30352771 KPPAPPSPVQS(ph)QSPSTNWSPAVPVK ddPTM_A459_MK2206_30min_R1 1 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KPPAPPS(0.378)PVQS(0.588)QS(0.031)PS(0.002)T(0.001)NWSPAVPVK 83.318 6.70E-05 18323000 5065.9 5637.4 5353.8 4419.3 4919.5 4446.2 5428.8 4546.5 4977.8 5142.4 TRUE FALSE 4635.018603 5270.404235 4990.398973 4759.675252 4723.545898 4697.940002 5066.654657 4506.75043 5495.260123 5779.479335 0.801978575 0.911916789 0.863468607 0.823547412 0.817296096 0.812865611 0.876662821 0.779784851 0.950822696 1 12.49672381 -8.443824667 4.916782079 0.999118809 0.839330934 0.700173585 0.037081771 0.105766721 4.239115024 0.035433817 0.00922814 3.60E-09 8.443824667 -0.159787875 KPPAPPSPVQSQS(ph)PST(ph)NWSPAVPVK ddPTM_A459_MK2206_30min_R2 1 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 KPPAPPS(0.363)PVQS(0.377)QS(0.395)PS(0.405)T(0.449)NWS(0.012)PAVPVK 50.851 0.047926 20405000 41672 45547 38173 36873 38426 32820 46136 40394 28127 45433 TRUE FALSE 44862.44036 43285.20221 39445.66877 33860.35795 36917.20216 34068.9881 40078.28778 45673.63449 30573.43562 43950.52493 1.020748681 0.984862007 0.897501653 0.770419876 0.839971814 0.775166807 0.911895543 1.039205665 0.695633002 1 15.42359278 -5.280401501 3.210885417 0.859626056 1.010508009 0.240871035 0.098817951 0.341370914 7.214707858 0.026176939 0.072294732 5.24E-06 5.280401501 0.150881952 KPPEADMNIFEDIGDY(ph)VPSTTKTPR ddPTM_A459_MK2206_30min_R1 1 KPPEADMNIFEDIGDYVPSTTKTPR 25 2 Q13123 Q13123 IK Protein Red 1 KPPEADMNIFEDIGDY(0.787)VPS(0.022)T(0.055)T(0.045)KT(0.091)PR 59.356 0.012035 6360800 1622.2 1758.8 1630.3 1661.8 1280.6 1588.7 1453.2 1515.1 1390.1 885.04 TRUE FALSE 1484.223371 1644.3018 1519.639778 1789.792124 1229.59099 1678.650821 1356.25968 1501.85364 1534.60587 994.6854369 1.492153515 1.653087237 1.527759151 1.799354909 1.236160644 1.687619783 1.363506119 1.509877982 1.542805205 1 9.958096544 -12.42211762 0.26744148 1.53E-19 1.587228774 0.538355353 0.149744948 42.62658658 1.136748401 24.41085562 0.183015656 3.78E-13 12.42211762 1.587228774 KPPLS(ph)PAQTNPVVQR ddPTM_A459_MK2206_30min_R2 2 KPPLSPAQTNPVVQR 15 1 Q8IY33;Q8IY33-4;Q8IY33-2 Q8IY33 MICALL2 MICAL-like protein 2 1 KPPLS(0.978)PAQT(0.022)NPVVQR;KPPLS(0.941)PAQT(0.059)NPVVQR 89.353 0.0085646 54281000 227586 263550 226560 279590 219480 219031 220118 195539 188245 172338 TRUE FALSE 245010.1591 250462.4902 234113.3973 256746.6026 210862.1124 227366.3782 191216.2422 221096.6187 204618.2098 166714.6252 1.469638065 1.502342641 1.404276302 1.540036469 1.264808724 1.363805833 1.146967412 1.326198097 1.227356086 1 17.34702115 -7.267529728 0.138748735 0.803899546 1.802236384 0.770709983 0.076746223 3.685108075 0.335959765 0.862087709 1.288930658 5.40E-08 7.267529728 0.998336839 KPPVS(ph)PPLLLVQDSETTGR ddPTM_A459_MK2206_30min_R2 1 KPPVSPPLLLVQDSETTGR 19 1 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 KPPVS(1)PPLLLVQDSETTGR 61.437 0.018263 6614200 24536 30999 21868 24844 29011 26370 30007 25305 20663 29695 TRUE FALSE 26414.49502 29459.63474 22597.06821 22814.16573 27871.88237 27373.52883 26067.04486 28612.45039 22460.23039 28726.05458 0.919530907 1.025537101 0.786640161 0.794197674 0.970264896 0.952916411 0.90743561 0.996045256 0.781876617 1 14.81007224 KPQEEDS(ph)PGPSTSSVLK ddPTM_A459_MK2206_30min_R2 1 KPQEEDSPGPSTSSVLK 17 1 A0A182DWI4;E9PN30;Q9BQE4 A0A182DWI4 VIMP Selenoprotein S 1 KPQEEDS(0.54)PGPS(0.013)T(0.018)S(0.365)S(0.063)VLK 70.959 0.015809 2743300 25639 11666 14418 15500 10084 11573 27300 12016 11152 11831 TRUE FALSE 27601.94155 11086.6834 14898.68892 14233.60042 9688.051492 12013.41862 23715.47721 13586.53246 12121.9808 11444.95544 2.411712453 0.968696074 1.301769064 1.243657129 0.846490975 1.049669323 2.072133643 1.187119734 1.059154915 1 13.48242423 -4.75417584 24.99607735 1.215216 2.411714552 0.562334638 0.322212183 204.972731 705314.3454 0.083035654 0.831443952 1.76E-05 4.75417584 1.196498551 KPRPS(ph)EGDEDCLPASK ddPTM_A459_MK2206_30min_R1 2 KPRPSEGDEDCLPASK 16 2 Q5VU10;P78346;P78346-2 Q5VU10 RPP30 Ribonuclease P protein subunit p30 1 KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK 110.64 0.0031203 42908000 8582.3 8601.1 8065.5 6709.7 6854.4 5642.2 6638 6270.8 6064.2 6708.3 TRUE FALSE 7852.330318 8041.166827 7518.036332 7226.482257 6581.374734 5961.656488 6195.191132 6215.975057 6694.595291 7539.374849 1.041509472 1.066556178 0.997169723 0.958498868 0.872933747 0.790736183 0.821711515 0.824468233 0.887950981 1 12.88022919 -5.968028927 1.685951747 0.849780084 1.049157001 0.653458469 0.055360878 0.200573952 1.153436998 0.01788915 0.030827619 1.08E-06 5.968028927 0.199376917 KPRPS(ph)EGDEDCLPASK ddPTM_A459_MK2206_30min_R2 2 KPRPSEGDEDCLPASK 16 2 Q5VU10;P78346;P78346-2 Q5VU10 RPP30 Ribonuclease P protein subunit p30 1 KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK 114.75 0.0023224 92788000 91565 106625 102343 88075 84905 69395 85016 64258 60410 83477 TRUE FALSE 98575.2868 101330.1575 105755.0645 80878.99076 81571.20309 72035.87535 73853.29708 72656.74123 65664.3526 80753.15233 1.220698932 1.254813647 1.309609117 1.00155831 1.010130264 0.89205032 0.914556212 0.899738761 0.813149093 1 16.30123096 -5.947575933 2.193909845 0.911574464 1.264667838 0.858728371 0.061014133 0.103641763 1.008987235 0.018972092 0.030808668 1.13E-06 5.947575933 0.353093374 KPS(ph)DEEFASR ddPTM_A459_MK2206_30min_R2 1 KPSDEEFASR 10 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5 B1ALK7 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 KPS(0.998)DEEFAS(0.002)R 67.952 0.04175 44541000 139830 132750 150710 142090 156780 126600 134050 111870 129380 128790 TRUE FALSE 150535.4923 126157.828 155734.5962 130480.7925 150624.0294 131417.8517 116449.074 126491.7931 140633.2385 124587.5928 1.208270333 1.012603464 1.250000844 1.047301657 1.208980975 1.054822946 0.934676329 1.015284028 1.128790077 1 16.92680088 -6.96120894 9.089690923 1.017229222 1.137957862 0.352278933 0.081263534 0.348408264 76.45586697 0.027264071 0.023983105 1.09E-07 6.96120894 0.12072864 KPS(ph)EDEVLNK ddPTM_A459_MK2206_30min_R1 3 KPSEDEVLNK 10 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK 162.48 0.00073273 117278000 23824.2 26481.4 25532.5 19723.5 17182.6 13030.2 16619 18008.5 18623.5 17555.6 TRUE FALSE 21797.82668 24757.45605 23799.42504 21242.60739 16498.18066 13767.95866 15510.37683 17851.05358 20559.47947 19730.52027 1.104777086 1.254779687 1.206223897 1.076636961 0.836175652 0.697800082 0.786110889 0.904743177 1.042014057 1 14.26814138 -6.089735164 3.265975485 0.859879332 1.191907706 0.665120184 0.099933891 0.152113106 3.099899703 0.032793793 0.045168111 8.13E-07 6.089735164 0.332028375 KPS(ph)EDEVLNK ddPTM_A459_MK2206_30min_R2 4 KPSEDEVLNK 10 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK 159.66 0.00081727 190180000 733259 906554 748430 775280 718207 609566 821714 604801 530278 663528 TRUE FALSE 789397.8728 861535.8466 773382.2827 711937.144 690006.5845 632763.4613 713821.9647 683850.5673 576400.6219 641877.1357 1.229827063 1.342213017 1.204875886 1.109148627 1.074982339 0.985801528 1.112085047 1.065391691 0.897992139 1 19.29193765 -5.823200377 1.44725805 1.024149105 1.292694368 0.759764788 0.060502401 0.202277034 0.858127766 0.02036426 0.044054961 1.50E-06 5.823200377 0.268545263 KPS(ph)GSGDQSKPNCTK ddPTM_A459_MK2206_30min_R2 1 KPSGSGDQSKPNCTK 15 2 H7BZK3;A0A087WWX2;Q8TBM8 H7BZK3 DNAJB14 DnaJ homolog subfamily B member 14 1 KPS(0.878)GS(0.121)GDQS(0.001)KPNCTK 83.229 0.026995 6584100 30899 21538 23454 23748 20555 20300 26076 16908 17370 21562 TRUE FALSE 33264.6512 20468.45424 24235.94465 21807.71243 19747.90742 21072.53072 22652.18988 19117.93365 18880.8112 20858.43371 1.594781836 0.981303511 1.161925435 1.045510547 0.946758884 1.01026429 1.085996686 0.916556532 0.905188351 1 14.34834321 -2.931996083 1.586559852 1.001870524 200 0.822721838 0.080623743 188.6373143 1.852309666 0.02284515 135431.1274 0.00116951 2.931996083 198.9981295 KPS(ph)PAASPATK ddPTM_A459_MK2206_30min_R1 1 KPSPAASPATK 11 1 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KPS(0.999)PAASPATK 99.069 0.0090468 31377000 5478.1 5884.8 5650.2 4768.6 5199.2 4724.2 5499.1 4926.1 2611 4859.7 TRUE FALSE 5012.158828 5501.69845 5266.680166 5135.878398 4992.104855 4991.680121 5132.265073 4883.031627 2882.422794 5461.756325 0.917682615 1.007313055 0.964283255 0.940334591 0.914010907 0.913933142 0.939673022 0.89404055 0.527746502 1 12.41514923 -8.020032377 24.57792285 0.746213301 0.941617173 0.291762876 0.109120085 635.8475625 780122.3736 0.065120109 0.025353251 9.55E-09 8.020032377 0.195403872 KPS(ph)PAASPATK ddPTM_A459_MK2206_30min_R2 3 KPSPAASPATK 11 1 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KPS(0.999)PAAS(0.001)PATK;KPS(0.999)PAAS(0.001)PATK;KPS(0.981)PAAS(0.006)PAT(0.014)K 91.789 0.013308 203343000 467939 486553 507612 527043 453841 368801 552648 423767 402558 456979 TRUE FALSE 503764.7696 462391.4855 524535.5307 483981.901 436020.922 382835.9805 480084.6538 479154.8019 437571.7672 442067.8127 1.139564463 1.045974107 1.186549927 1.094813708 0.98632135 0.866011887 1.085997759 1.083894344 0.989829512 1 18.75390817 -6.169838761 4.930942381 1.003817971 1.119243674 0.425335073 0.065702824 0.246747131 9.954312096 0.020861163 0.027175848 6.76E-07 6.169838761 0.115425702 KPS(ph)PEPEGEVGPPK ddPTM_A459_MK2206_30min_R1 4 KPSPEPEGEVGPPK 14 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK 139 0.00057057 60999400 17873.2 19188.1 19154.3 15429.4 14325.8 13237.4 16580.8 16417.2 18349.3 18441.9 TRUE FALSE 16352.99048 17938.9512 17854.15948 16617.77506 13755.17305 13986.89015 15474.72509 16273.66615 20256.7754 20726.6218 0.788984845 0.865502896 0.861411939 0.80175994 0.663647611 0.674827296 0.746611061 0.785157673 0.97733126 1 14.33919737 -8.270025472 4.280166332 0.997693278 0.771530602 0.65191825 0.063057582 0.145093528 6.50009794 0.064900942 0.019020006 5.37E-09 8.270025472 -0.226162676 KPS(ph)PEPEGEVGPPK ddPTM_A459_MK2206_30min_R2 3 KPSPEPEGEVGPPK 14 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK 120.11 0.0010858 162434000 574567 617232 606870 540655 539714 379540 702022 439406 404908 653899 TRUE FALSE 618556.2913 586581.1564 627102.7429 496481.757 518522.1165 393983.6607 609845.6681 496837.8729 440126.1659 632562.3292 0.977858249 0.927309657 0.991369094 0.78487405 0.819717034 0.622837691 0.964087869 0.785437023 0.69578308 1 19.27084812 -5.764489966 24.99863012 0.80042873 0.961692082 0.307253773 0.105955306 88.72167498 727056.783 0.02844076 0.044303673 1.72E-06 5.764489966 0.161263352 KPS(ph)PQPSS(ph)PR ddPTM_A459_MK2206_30min_R1 1 KPSPQPSSPR 10 1 G3V5E1;O75909-1;O75909;O75909-4 G3V5E1 CCNK Cyclin-K 2 KPS(1)PQPS(0.316)S(0.684)PR 123.95 0.013429 6701400 4249.2 3893.3 3838.7 3336.5 4120.1 3682.1 4016 3763.4 2934 3519.7 TRUE FALSE 3887.783227 3639.845462 3578.139739 3593.477808 3955.987693 3890.57732 3748.099968 3730.496991 3238.999799 3955.747008 0.982818977 0.920141115 0.904542108 0.908419522 1.000060844 0.983525314 0.947507502 0.943057527 0.818808633 1 11.94973445 -10.98667164 3.632445742 1.000717987 0.936291134 0.135812952 0.049479151 1104110582 162984386.3 6780198.412 0.012243252 1.03E-11 10.98667164 -0.064426853 KPS(ph)PQPSSPR ddPTM_A459_MK2206_30min_R2 1 KPSPQPSSPR 10 1 G3V5E1;O75909-1;O75909;O75909-4 G3V5E1 CCNK Cyclin-K 1 KPS(0.998)PQPS(0.002)SPR 108.56 0.01904 2737300 15030 17245 15770 16470 14848 14939 16948 11850 14106 13178 TRUE FALSE 16180.70836 16388.63838 16295.76393 15124.34832 14264.99291 15507.51411 14722.70724 13398.83569 15332.91438 12748.00294 1.269273974 1.285584766 1.278299355 1.186409227 1.118998245 1.216466155 1.154903032 1.051053702 1.202769913 1 13.63798364 -1.522878745 0.089146775 0.882060863 2.045389987 0.691193821 0.050905867 87.89571374 0.566292843 0.979131726 12.50737267 0.03 1.522878745 1.163329124 KPS(ph)PSESPEPWKPFPAVSPEPR ddPTM_A459_MK2206_30min_R1 2 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.717)PS(0.215)ES(0.068)PEPWKPFPAVSPEPR;KPS(0.704)PS(0.207)ES(0.089)PEPWKPFPAVSPEPR 48.567 0.02537 70565000 3005.9 3390.9 3925.2 3293.8 3162.2 3194.6 3521.8 2993.2 2898.3 3130.9 TRUE FALSE 2750.23242 3170.151794 3658.76836 3547.489047 3036.242878 3375.475491 3286.867148 2967.030768 3199.588657 3518.779529 0.781587024 0.900923678 1.039783348 1.008158942 0.862868177 0.959274505 0.934092949 0.843198826 0.909289323 1 11.78085941 -5.498374567 0.006029539 1.831675795 1.69E-07 0.064151418 0.074248196 72613.27076 87.90001128 12902.34941 13807.73808 3.17E-06 5.498374567 -1.831675626 KPS(ph)PSESPEPWKPFPAVSPEPR ddPTM_A459_MK2206_30min_R2 1 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.642)PS(0.254)ES(0.104)PEPWKPFPAVSPEPR 79.332 0.0014913 15190000 39455 40771 34455 47338 29442 31768 52220 32389 31103 40544 TRUE FALSE 42475.70514 38746.37143 35603.7125 43470.33397 28285.95915 32976.9535 45363.45127 36622.35351 33808.28272 39221.0526 1.082982284 0.987897286 0.907770448 1.108341849 0.721193269 0.840797258 1.156609735 0.93374224 0.861993253 1 15.25934063 -4.130163655 1.137564242 0.938007379 1.495839106 0.113605959 0.119988224 14.52621203 5.485654823 0.03745859 13.87586006 7.41E-05 4.130163655 0.557831727 KPS(ph)TSDDSDSNFEK ddPTM_A459_MK2206_30min_R2 2 KPSTSDDSDSNFEK 14 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 KPS(0.943)T(0.045)S(0.012)DDSDSNFEK;KPS(0.742)T(0.235)S(0.024)DDSDSNFEK 124.04 0.0044962 7652700 43414.2 48036.3 34653.2 50966.8 32182.2 37056.9 69157 58767 29354.3 45407.5 TRUE FALSE 46738.02453 45650.88719 35808.52039 46802.64941 30918.56513 38467.1263 60076.60283 66448.04868 31907.48395 43925.85699 1.064020778 1.039271407 0.815203683 1.065492004 0.703880749 0.875728533 1.367681975 1.512731981 0.726394114 1 15.42278281 -7.24389429 24.83056277 1.194429691 0.923392683 0.183878048 0.224444095 1065.517258 1507968.132 0.085071375 0.065733291 5.70E-08 7.24389429 -0.271037008 KPS(ph)VGVPPPASPSYPR ddPTM_A459_MK2206_30min_R2 1 KPSVGVPPPASPSYPR 16 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 KPS(1)VGVPPPASPSYPR 58.164 0.041782 9988300 35051 41310 51655 42082 25905 34811 32182 20348 37817 48017 TRUE FALSE 37734.53151 39258.60547 53377.15192 38643.76599 24887.83954 36135.757 27956.46474 23007.55347 41106.2543 46450.20922 0.812365157 0.845176074 1.149126189 0.831939546 0.53579607 0.777946055 0.601858747 0.495316466 0.88495305 1 15.50339747 -6.005483392 24.93486709 0.687748536 0.937187015 0.249243828 0.167626854 279.2700423 1269950.348 0.046119651 0.066131757 9.87E-07 6.005483392 0.24943848 KPS(ph)VPDSASPADDSFVDPGER ddPTM_A459_MK2206_30min_R2 2 KPSVPDSASPADDSFVDPGER 21 1 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333-2;P16333 C9K098 NCK1 Cytoplasmic protein NCK1 1 KPS(0.903)VPDS(0.096)AS(0.001)PADDSFVDPGER;KPS(0.988)VPDS(0.012)ASPADDSFVDPGER 66.264 0.0048426 20426700 74387 77251 78990 67703 50326 55298 54279 41952 39084 54273 TRUE FALSE 80082.12591 73414.82767 81623.48718 62171.44833 48349.94837 57402.40414 47152.1021 47435.27044 42483.45567 52502.07645 1.525313498 1.398322364 1.554671599 1.184171228 0.920914974 1.093335883 0.898099757 0.903493226 0.809176675 1 15.68008686 -5.992827702 2.846840531 0.938384183 1.484548532 0.902400624 0.081556457 0.076965505 1.268623995 0.025407757 0.038069304 1.02E-06 5.992827702 0.546164348 KPS(ph)VSEEVQATPNK ddPTM_A459_MK2206_30min_R1 2 KPSVSEEVQATPNK 14 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 KPS(0.999)VS(0.001)EEVQATPNK;KPS(0.999)VS(0.001)EEVQATPNK 234.82 1.07E-13 35779000 7404.3 7751.3 7142.5 5430 5260.7 4652.1 5563.2 5576.4 5452.2 4896.9 TRUE FALSE 6774.525403 7246.688961 6657.687 5848.219541 5051.155179 4915.497882 5192.089079 5527.646123 6018.975701 5503.564942 1.230934036 1.316726347 1.20970445 1.062623882 0.917796961 0.893147975 0.943404708 1.00437556 1.093650346 1 12.42615071 -5.804495568 2.550749103 0.970582571 1.272235145 0.830098819 0.056291384 0.110265527 1.46180951 0.018120996 0.031814051 1.57E-06 5.804495568 0.301652574 KPS(ph)VSEEVQATPNK ddPTM_A459_MK2206_30min_R2 5 KPSVSEEVQATPNK 14 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 KPS(0.973)VS(0.027)EEVQATPNK;KPS(0.959)VS(0.04)EEVQAT(0.001)PNK;KPS(0.999)VS(0.001)EEVQATPNK;KPS(0.717)VS(0.115)EEVQAT(0.168)PNK;KPS(0.999)VSEEVQATPNK 180.02 0.00013159 93002800 346719 409071 356391 390139 337142 270274 345798 261376 268105 319789 TRUE FALSE 373264.0732 388757.129 368272.8981 358263.3957 323904.1111 280559.4665 300394.3072 295538.7406 291424.2883 309354.3111 1.206590824 1.256672737 1.190456654 1.158100543 1.047032802 0.90691953 0.971036434 0.955340624 0.942040495 1 18.23890061 -6.285728767 1.827066168 0.952475083 1.222260885 0.941977478 0.02917309 0.071896705 0.472932818 0.010051551 0.013026287 5.18E-07 6.285728767 0.269785802 KPSDGSPDT(ph)KPSR ddPTM_A459_MK2206_30min_R1 1 KPSDGSPDTKPSR 13 2 Q92733 Q92733 PRCC Proline-rich protein PRCC 1 KPS(0.001)DGS(0.002)PDT(0.917)KPS(0.081)R 101.01 0.034001 32035000 6546.3 5920.8 5475.9 5936.8 3880.5 3574.4 5358.1 5720.5 803.73 4455.2 TRUE FALSE 5989.502809 5535.354844 5104.211165 6394.053365 3725.931468 3776.779439 5000.670925 5670.486272 887.2806097 5007.143811 1.196191489 1.105491484 1.019385773 1.276986163 0.744123119 0.754278204 0.99870727 1.132479211 0.177202941 1 12.28977218 -6.269023482 24.84862005 0.815291838 1.137074429 0.317502867 0.249445286 709.4324396 2324386.162 0.075284418 0.08701976 5.38E-07 6.269023482 0.321782591 KPSDGSPDTKPS(ph)R ddPTM_A459_MK2206_30min_R2 1 KPSDGSPDTKPSR 13 2 Q92733 Q92733 PRCC Proline-rich protein PRCC 1 KPS(0.002)DGS(0.032)PDT(0.33)KPS(0.635)R 83.204 0.035607 3744500 15737 14015 12556 16118 15847 10728 14222 13618 9867.6 14151 TRUE FALSE 16941.83682 13319.03548 12974.61077 14801.10784 15224.76716 11136.26156 12354.63432 15397.91936 10725.86601 13689.25403 1.237601171 0.972955535 0.947795311 1.08122092 1.112169233 0.813503901 0.902506031 1.124818001 0.783524507 1 13.74075621 -6.742134364 24.99947674 0.931273788 1.05873324 0.280092755 0.115641587 377.9968532 489494.8268 0.038021614 0.037966445 1.81E-07 6.742134364 0.127459452 KPSGLNGEASKS(ph)QEMVHLVNK ddPTM_A459_MK2206_30min_R2 1 KPSGLNGEASKSQEMVHLVNK 21 2 H0YE40;H0Y2P0;H0YD13;P16070-8;P16070-5;P16070-7;P16070-3;P16070-6;P16070-4;P16070-17;P16070-16;P16070-10;P16070-11;P16070-13;P16070-14;P16070-12;P16070-18;P16070 H0YE40 CD44 CD44 antigen 1 KPSGLNGEAS(0.179)KS(0.821)QEMVHLVNK 65.298 0.0039867 20098000 128610 85819 94689 90459 99660 127130 207800 104940 211120 154250 TRUE FALSE 138456.4805 81557.35325 97845.884 83068.21034 95746.84765 131968.0212 180515.6104 118656.0183 229482.836 149216.8351 0.927887797 0.546569381 0.655729522 0.556694627 0.641662501 0.884404371 1.209753646 0.795191898 1.537915181 1 17.18705079 -6.986177558 3.051735712 1.118291753 0.652540081 0.54745867 0.200475373 0.193363456 3.699732819 0.074925034 0.06126106 1.03E-07 6.986177558 -0.465751672 KPSGS(ph)PDLWK ddPTM_A459_MK2206_30min_R1 2 KPSGSPDLWK 10 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.03)GS(0.97)PDLWK;KPS(0.295)GS(0.705)PDLWK 109.44 0.018078 78826000 6789.3 7260.3 7184.6 5748.5 4624.4 4553.4 6101.9 6110.2 5915.1 6898.6 TRUE FALSE 6211.834383 6787.65315 6696.929369 6191.250466 4440.200356 4811.209573 5694.853385 6056.779166 6529.995812 7753.25065 0.801190967 0.875459012 0.863757625 0.798536091 0.57268887 0.620540956 0.734511709 0.78119223 0.842226842 1 12.92058559 -10.57182594 10.15782482 0.999999997 0.762264688 0.355509213 0.094600039 1.48E-10 0 0.105052543 0.025478984 2.68E-11 10.57182594 -0.237735309 KPSGS(ph)PDLWK ddPTM_A459_MK2206_30min_R2 1 KPSGSPDLWK 10 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.015)GS(0.985)PDLWK 108.97 0.018594 21342000 71359 52687 59901 60291 50009 30872 62937 48416 38508 59493 TRUE FALSE 76822.29991 50070.64019 61898.06944 55365.03244 48045.39538 32046.85559 54673.2963 54744.13744 41857.35623 57551.74828 1.334838683 0.870010759 1.075520228 0.962004354 0.83482078 0.556835484 0.949984978 0.95121589 0.727299474 1 15.81257213 -1.522879189 0.765955733 0.847110693 88.04162476 0.461533175 0.143926612 389.1773207 1.567732492 0.054007294 58668.3886 0.029999969 1.522879189 87.19451407 KPSISIT(ph)T(ph)ESLK ddPTM_A459_MK2206_30min_R1 1 KPSISITTESLK 12 1 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5;G3V3T3 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 KPSIS(0.204)IT(0.796)T(0.5)ES(0.5)LK 92.051 0.024707 0 1873.4 2309.4 2255.3 2242.9 1991.4 1490.8 1974.9 1903.7 2176.7 2242.5 TRUE FALSE 1714.057492 2159.05764 2102.21652 2415.648547 1912.078321 1575.207808 1843.158024 1887.056152 2402.975754 2520.31783 0.680095769 0.85666086 0.834107704 0.958469808 0.758665553 0.625003636 0.731319678 0.748737373 0.953441556 1 11.29938996 -8.349832745 4.438786343 0.994127465 0.778169944 0.456164849 0.088782161 0.227575111 7.482929441 0.092971449 0.024597263 4.47E-09 8.349832745 -0.215957521 KPSLVSDLPWEGAAPQS(ph)PSFSGSEDSGSPK ddPTM_A459_MK2206_30min_R1 2 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 1 KPSLVSDLPWEGAAPQS(0.996)PS(0.004)FSGSEDSGSPK;KPSLVSDLPWEGAAPQS(0.996)PS(0.004)FSGSEDSGSPK 129.93 3.99E-18 40465000 10552 10518 10867.9 9929.3 9132.6 8947.2 9515.1 8830.4 8921.5 8859.7 TRUE FALSE 9654.496989 9833.276288 10130.21723 10694.05641 8768.829203 9453.782732 8880.36504 8753.196744 9848.921851 9957.306523 0.969589212 0.987543797 1.017365209 1.073990881 0.88064269 0.949431727 0.891844097 0.879072742 0.989115061 1 13.28153983 -6.269382242 24.98255254 0.924533377 1.010741165 0.410774234 0.046715731 557.3867774 1753137.166 0.014230006 0.016434028 5.38E-07 6.269382242 0.086207789 KPSLVSDLPWEGAAPQS(ph)PSFSGSEDSGSPK ddPTM_A459_MK2206_30min_R2 2 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 1 KPSLVSDLPWEGAAPQS(0.997)PS(0.003)FSGSEDSGSPK;KPSLVSDLPWEGAAPQS(0.997)PS(0.003)FSGSEDSGSPK 148.3 6.78E-20 18879100 88877 100757 94178 99526 84731 64891 90178 71595 67107 80544 TRUE FALSE 95681.49145 95753.55389 97317.84752 91394.40743 81404.0352 67360.47248 78337.52028 80952.71232 72943.84556 77915.85588 1.22801053 1.228935405 1.24901211 1.172988558 1.044768543 0.864528429 1.005411792 1.038976103 0.936187439 1 16.24962933 -6.267197025 2.654425967 0.97260099 1.231648945 0.869482838 0.046152538 0.096171727 1.34732593 0.015373245 0.019306337 5.41E-07 6.267197025 0.259047955 KPSLVSDLPWEGAAPQSPS(ph)FSGSEDSGSPK ddPTM_A459_MK2206_30min_R2 1 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 1 KPSLVSDLPWEGAAPQS(0.004)PS(0.218)FS(0.218)GS(0.218)EDS(0.172)GS(0.172)PK 52.144 0.0065167 8841100 13571 12460 13654 15137 10814 11157 13644 13016 15171 16198 TRUE FALSE 14610.00619 11841.25452 14109.21755 13900.25868 10389.38802 11581.58745 11852.52641 14717.23589 16490.54616 15669.46059 0.932387309 0.75568999 0.900427776 0.887092354 0.663034185 0.739118452 0.756409344 0.939230538 1.052400372 1 13.9356679 -7.94311324 4.146988221 1.019990406 0.802366038 0.564922326 0.079551839 0.1611919 5.634461716 0.051910058 0.022443739 1.14E-08 7.94311324 -0.217624368 KPSLVSDLPWEGAAPQSPSFSGSEDSGS(ph)PK ddPTM_A459_MK2206_30min_R2 1 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 1 KPSLVSDLPWEGAAPQS(0.152)PS(0.035)FS(0.027)GS(0.274)EDS(0.111)GS(0.401)PK 111.23 1.78E-11 8400600 70234 55826 70147 48311 57852 42134 76494 55491 51490 82753 TRUE FALSE 75611.16904 53053.76202 72485.66597 44363.83676 55580.4398 43737.43889 66450.24591 62743.86423 55968.50713 80052.77639 0.944516511 0.662734816 0.905473479 0.554182363 0.694297466 0.546357551 0.830080466 0.783781239 0.69914511 1 16.28866382 -9.983102098 14.60007882 1.000047825 0.730547482 0.280144693 0.126906192 0 0 0.119659064 0.029021586 1.04E-10 9.983102098 -0.269500344 KPSPQPS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 KPSPQPSSPR 10 1 G3V5E1;O75909-1;O75909;O75909-4 G3V5E1 CCNK Cyclin-K 1 KPSPQPS(0.5)S(0.5)PR 92.792 0.013414 12566000 5203.8 5473.6 5678.6 4769 4577.4 4329.9 5811.7 5818.9 1587.4 4066.7 TRUE FALSE 4761.189484 5117.267645 5293.152453 5136.309206 4395.072465 4575.055196 5424.012097 5768.025971 1752.415911 4570.513498 1.041718723 1.119626416 1.158108921 1.123792591 0.96161459 1.000993695 1.186740199 1.2620083 0.38341773 1 12.15814055 -8.24817564 24.99971991 0.691708817 1.103822893 0.514376649 0.161317808 509.2370586 959823.0874 0.104193303 0.038879311 5.65E-09 8.24817564 0.412114075 KPSPQPSS(ph)PR ddPTM_A459_MK2206_30min_R1 2 KPSPQPSSPR 10 1 G3V5E1;O75909-1;O75909;O75909-4 G3V5E1 CCNK Cyclin-K 1 KPSPQPS(0.145)S(0.854)PR;KPSPQPS(0.015)S(0.985)PR 116.24 0.011489 117531000 19337.2 19242.5 17847.8 16744.3 16178.8 14890.5 19536.4 18904.4 3520.1 12873.4 TRUE FALSE 17692.4696 17989.80975 16636.34106 18033.94889 15534.36414 15733.58724 18233.1624 18739.12082 3886.026992 14468.25398 1.222847596 1.243398808 1.149851329 1.246449565 1.073686165 1.087455837 1.260218574 1.295188822 0.268589907 1 13.82060321 -8.243629288 24.99604582 0.634294901 1.193278364 0.616162767 0.177749097 418.1633138 586884.679 0.11049592 0.041568899 5.71E-09 8.243629288 0.558983463 KPSPQPSS(ph)PR ddPTM_A459_MK2206_30min_R2 2 KPSPQPSSPR 10 1 G3V5E1;O75909-1;O75909;O75909-4 G3V5E1 CCNK Cyclin-K 1 KPSPQPSS(1)PR;KPSPQPS(0.207)S(0.793)PR 147.96 0.001445 8312600 66406 82430 69267 77667 76507 78055 78514 64227 69500 74821 TRUE FALSE 71490.09442 78336.64606 71576.32721 71321.35766 73502.95076 81025.43772 68205.01749 72621.68942 75544.98437 72379.5969 0.987710591 1.082302878 0.988901987 0.985379316 1.015520311 1.119451354 0.94232381 1.003344762 1.043733146 1 16.14329545 -14.52287817 0.170877325 0.926609427 1.023263086 0.009720349 0.048930203 951.8288379 8.966755312 23.70107677 0.175331446 3.00E-15 14.52287817 0.096653659 KPSPS(ph)ESPEPWKPFPAVSPEPR ddPTM_A459_MK2206_30min_R2 1 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.266)PS(0.682)ES(0.052)PEPWKPFPAVSPEPR 57.414 0.0083561 24842000 50731 60744 58945 69891 62118 54496 63428 49232 55708 60117 TRUE FALSE 54615.00437 57727.54129 60910.19688 64180.68173 59678.9352 56569.88347 55099.82741 55666.79144 60553.38114 58155.38721 0.939122014 0.992643056 1.04736981 1.103606816 1.026197882 0.972736769 0.947458697 0.95720782 1.041234253 1 15.82762522 -6.756881798 24.21480443 0.978786193 1.026135479 0.139635863 0.045803073 141.9809211 754356.2384 0.016688107 0.016137424 1.75E-07 6.756881798 0.047349286 KPSPSESPEPWKPFPAVS(ph)PEPR ddPTM_A459_MK2206_30min_R1 1 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.026)PS(0.013)ES(0.388)PEPWKPFPAVS(0.572)PEPR 68.134 0.0021117 35474000 1463.6 1647.8 1864.3 1610.2 1674.9 1547.3 1733.1 1684.9 1741.6 1529.9 TRUE FALSE 1339.113134 1540.52792 1737.75651 1734.217883 1608.185186 1634.906789 1617.488061 1670.169097 1922.645552 1719.435562 0.778809723 0.895949784 1.010655211 1.008597194 0.935298316 0.950839232 0.94070874 0.971347304 1.118184127 1 10.74771933 -4.913996397 2.62038086 0.985959556 0.764410053 0.637499676 0.050253455 0.242348075 2.704703646 0.013599027 0.105179552 1.22E-05 4.913996397 -0.221549502 KPSPSESPEPWKPFPAVS(ph)PEPR ddPTM_A459_MK2206_30min_R2 2 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPSPSESPEPWKPFPAVS(1)PEPR;KPSPS(0.005)ES(0.016)PEPWKPFPAVS(0.98)PEPR 59.628 0.0065642 9422000 50127 59790 52215 57047 59657 50608 61892 47456 54049 50788 TRUE FALSE 53964.76166 56820.91554 53955.82204 52386.07762 57314.56643 52533.9229 53765.50605 53658.66214 58750.08432 49130.79172 1.098389824 1.156523507 1.098207868 1.06625755 1.166571195 1.069266769 1.094334208 1.092159525 1.195789489 1 15.58433987 KPSVGVPPPAS(ph)PSYPR ddPTM_A459_MK2206_30min_R1 2 KPSVGVPPPASPSYPR 16 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 KPSVGVPPPAS(0.867)PS(0.133)YPR;KPS(0.003)VGVPPPAS(0.605)PS(0.384)Y(0.008)PR 122.53 0.00073862 129430000 10635.8 9834.6 10354.1 8878.7 10837.9 10507.5 11884.4 10321.8 8921.6 9603.4 TRUE FALSE 9731.169359 9194.365752 9651.29254 9562.539012 10406.20349 11102.42557 11091.61336 10231.55759 9849.032246 10793.14169 0.901606746 0.851871125 0.894206044 0.885982903 0.964149623 1.028655593 1.027653826 0.94796843 0.912526911 1 13.39782725 -6.302132013 3.788093127 0.98399467 0.880876211 0.652727264 0.034753014 0.154792024 4.746083673 0.012024856 0.014305601 4.99E-07 6.302132013 -0.103118459 KPSVGVPPPAS(ph)PSYPR ddPTM_A459_MK2206_30min_R2 2 KPSVGVPPPASPSYPR 16 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 KPSVGVPPPAS(0.5)PS(0.5)Y(0.001)PR;KPSVGVPPPAS(0.771)PS(0.229)YPR 115.85 0.0010102 125882000 432100 477810 483770 613540 460040 565560 637270 475790 595200 531600 TRUE FALSE 465181.9082 454082.6502 499898.6503 563411.8194 441976.5181 587082.7821 553595.6835 537977.3866 646969.4201 514253.9355 0.904576273 0.882993048 0.972085221 1.095590681 0.859451892 1.141620397 1.076502571 1.046131783 1.258073834 1 18.9721214 -5.911135614 0.545727363 1.113415569 0.857114192 0.38033394 0.093635097 1.51038692 0.770490059 0.065403444 0.215813425 1.23E-06 5.911135614 -0.256301377 KPSVGVPPPASPS(ph)YPR ddPTM_A459_MK2206_30min_R1 1 KPSVGVPPPASPSYPR 16 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 KPSVGVPPPAS(0.238)PS(0.762)YPR 144.17 0.00070015 16549000 2371 2095.4 2072.9 1954.7 2260.3 1895 2381.3 2058.3 1856 2024.1 TRUE FALSE 2169.333999 1958.989079 1932.197323 2105.251333 2170.267465 2002.293262 2222.447822 2040.3045 2048.937842 2274.860789 0.953611759 0.861146796 0.849369479 0.92544183 0.954022099 0.880182766 0.976959923 0.896892025 0.900687133 1 11.15156255 -5.904424295 10.02674472 0.929979546 0.885427248 0.185360509 0.043197152 0.555774833 53.72557015 0.011776623 0.017488072 1.25E-06 5.904424295 -0.044552298 KPTAEAS(ph)PVK ddPTM_A459_MK2206_30min_R1 1 KPTAEASPVK 10 1 H3BMJ2;Q6ZRI6-2;Q6ZRI6 H3BMJ2 C15orf39 Uncharacterized protein C15orf39 1 KPT(0.001)AEAS(0.999)PVK 67.136 0.042979 19440000 2347.8 2405.4 2552.4 2303.6 1670.9 2348.2 2683.5 3390.7 856.74 2815.8 TRUE FALSE 2148.107281 2248.808023 2379.150199 2481.023671 1604.344515 2481.153055 2504.488611 3361.055467 945.8011889 3164.642562 0.67878354 0.710604114 0.751791127 0.783982274 0.506959154 0.784023158 0.791396994 1.062064799 0.298865091 1 11.62782685 -6.958452648 24.99911147 0.792462702 0.69168602 0.058467289 0.201538176 476.5900321 286763.5635 0.067643842 0.059656214 1.10E-07 6.958452648 -0.100776683 KPTAEAS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 KPTAEASPVK 10 1 H3BMJ2;Q6ZRI6-2;Q6ZRI6 H3BMJ2 C15orf39 Uncharacterized protein C15orf39 1 KPTAEAS(1)PVK;KPTAEAS(1)PVK 81.703 0.022816 33821000 86353 97441 107614 94648 112057 82541 112278 91271 86763 110757 TRUE FALSE 92964.25207 92602.22163 111201.797 86914.95564 107657.0791 85682.15559 97535.76373 103200.4331 94309.48891 107143.0082 0.86766513 0.864286184 1.037881976 0.811205109 1.004797989 0.799698992 0.910332512 0.963202684 0.880220656 1 16.70917818 -14.52286769 0.360462263 2.161823715 0.903558243 0.130137483 0.073917543 1021.454279 8.127954099 920.7961987 0.051037189 3.00E-15 14.52286769 -1.258265472 KPTGSLPSPS(ph)GVRK ddPTM_A459_MK2206_30min_R1 1 KPTGSLPSPSGVRK 14 2 G3V538;F8W717;A0A3B3IU69;O00423-3;G3V497;G3V4H6;G3V500;G3V3N9;O00423 G3V538 EML1 Echinoderm microtubule-associated protein-like 1 1 KPT(0.001)GSLPS(0.249)PS(0.75)GVRK 100.69 0.0099654 28528000 3178.3 3175.9 2515.7 2699.3 3158.7 2284.7 2939.3 2884 1819.3 1610.8 TRUE FALSE 2907.968895 2969.148333 2344.941293 2907.200554 3032.88229 2414.05774 2743.22466 2858.785492 2008.422745 1810.358065 1.606294882 1.640088991 1.295291434 1.605870468 1.675294158 1.333469763 1.51529397 1.579127106 1.109406357 1 10.82205936 -8.344173168 4.179296076 1.011750359 1.527571039 0.718078729 0.119980392 0.11901443 3.620218874 0.114523554 0.030509272 4.53E-09 8.344173168 0.51582068 KPVTVSPT(ph)TPTS(ph)PTEGEAS ddPTM_A459_MK2206_30min_R2 1 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 2 KPVTVS(0.037)PT(0.909)T(0.054)PT(0.004)S(0.654)PT(0.33)EGEAS(0.011) 126.91 0.0010181 0 10625 11769 11235 10739 11583 9146 9598.7 5846 7103.6 9518.9 TRUE FALSE 11438.45817 11184.56857 11609.56929 9861.589348 11128.19322 9494.057439 8338.37916 6610.092272 7721.458288 9208.299073 1.242190124 1.214618301 1.260772397 1.070945814 1.208496068 1.031032698 0.905528708 0.717840746 0.838532527 1 13.16871898 -7.072259844 1.865458587 0.831340441 1.201280262 0.786045802 0.081806428 0.146594368 1.014118938 0.038084338 0.027688836 8.47E-08 7.072259844 0.369939821 KPVTVSPTT(ph)PTSPTEGEAS ddPTM_A459_MK2206_30min_R1 1 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVTVS(0.001)PT(0.028)T(0.961)PT(0.006)S(0.002)PT(0.002)EGEAS 128.45 0.041892 75428000 3683.8 3106.1 2797.2 2676.3 2914.1 2167.8 2394.4 2235.8 2024.3 1980 TRUE FALSE 3370.473466 2903.892325 2607.333857 2882.42909 2798.025226 2290.538963 2234.673945 2216.252636 2234.733229 2225.297348 1.514617122 1.304945754 1.171678859 1.295300645 1.257371393 1.029318156 1.004213638 0.995935504 1.004240279 1 11.11978241 -4.289150139 0.30360698 0.947547827 2.041282625 0.831048485 0.070329608 4.497765867 0.268490208 0.085331283 1.923572415 5.14E-05 4.289150139 1.093734798 KPVTVSPTTPTS(ph)PTEGEAS ddPTM_A459_MK2206_30min_R1 1 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVTVSPTTPT(0.017)S(0.738)PT(0.205)EGEAS(0.041) 96.773 0.002882 34234000 4056.6 2959.6 3527.1 2678.3 3298.1 2718.8 2599 2471.9 1976.3 2014 TRUE FALSE 3711.564868 2766.929502 3287.690279 2884.58313 3166.729693 2872.736106 2425.625452 2450.288439 2181.743457 2263.509525 1.63973901 1.22240683 1.452474683 1.27438524 1.399035285 1.269151322 1.071621491 1.082517397 0.96387642 1 11.14434566 -7.22633911 1.117766536 0.988217156 1.399923882 0.729931845 0.106440161 0.260535898 0.637977512 0.067984793 0.039824089 5.94E-08 7.22633911 0.411706726 KPVTVSPTTPTS(ph)PTEGEAS ddPTM_A459_MK2206_30min_R2 3 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVTVSPTTPT(0.08)S(0.885)PT(0.017)EGEAS(0.017);KPVTVSPT(0.001)T(0.006)PT(0.035)S(0.944)PT(0.012)EGEAS(0.003);KPVTVSPT(0.001)T(0.027)PT(0.187)S(0.764)PT(0.016)EGEAS(0.005) 95.073 0.0031593 135779800 140192 148887 133869 148618 145852 126963 133005 95213 109383 117756 TRUE FALSE 150925.2073 141493.4881 138332.1256 136475.434 140125.1176 131794.6659 115541.2837 107657.666 118896.9356 113913.6314 1.324909104 1.242111997 1.214359721 1.198060604 1.230099646 1.156970104 1.014288478 0.945081504 1.043746338 1 16.79758087 -7.125187237 2.200123625 0.990656297 1.239113741 0.896988351 0.038580479 0.097127282 0.923047993 0.018233144 0.013114556 7.50E-08 7.125187237 0.248457443 KPVTVSPTTPTSPTEGEAS(ph) ddPTM_A459_MK2206_30min_R1 1 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVTVSPTTPT(0.004)S(0.033)PT(0.189)EGEAS(0.774) 101.39 0.0021293 31332000 2638.8 2522.6 2399.1 1984.2 1859 1943.1 2054.7 1991.2 1556.9 1777.6 TRUE FALSE 2414.356203 2358.378281 2236.255776 2137.023428 1784.952094 2053.116643 1917.634712 1973.791148 1718.745326 1997.822508 1.208493844 1.180474377 1.119346572 1.06967632 0.893448785 1.027677201 0.959862402 0.987971224 0.860309321 1 10.9642127 -5.803685937 1.618758386 0.957155371 1.19528221 0.792762331 0.049678193 0.162357522 0.865686064 0.015603697 0.032493324 1.57E-06 5.803685937 0.238126839 KPVVNIITPSHVEER ddPTM_A459_MK2206_30min_R1 1 KPVVNIITPSHVEER 15 1 Q16719 Q16719 KYNU Kynureninase 0 140.03 0.00026395 6812900 4021.5 4249.4 4209.4 3920.5 4341.2 4191.9 4504.1 3635.4 3965.8 3503.8 FALSE TRUE 3679.450307 3972.763288 3923.677656 4222.457589 4168.280811 4429.241755 4203.639707 3603.616081 4378.059102 3937.877196 0.934374061 1.008859111 0.996394113 1.072267463 1.058509599 1.124779046 1.067488776 0.91511642 1.111781522 1 11.94320241 -4.756578458 1.178756335 1.048759134 0.882333723 0.262182215 0.057289691 2.372441661 2.672610069 0.017954839 0.496085314 1.75E-05 4.756578458 -0.166425411 KPVVNIITPSHVEER ddPTM_A459_MK2206_30min_R2 2 KPVVNIITPSHVEER 15 1 Q16719 Q16719 KYNU Kynureninase 0 ; 119.62 0.0012736 10207500 75617 95789 78152 105291 93837 103151 85131 78988 90699 91975 FALSE TRUE 81406.29566 91032.25755 80757.54867 96688.38849 90152.48789 107076.4836 73953.19744 89312.00281 98587.83507 88973.86328 0.914946172 1.02313482 0.907654739 1.086705521 1.013246863 1.203459978 0.831178896 1.003800437 1.108053887 1 16.44109398 -5.759011321 24.9974307 1.032959287 0.956034209 0.148548879 0.094429927 142.1132113 1463050.278 0.025981781 0.042451682 1.74E-06 5.759011321 -0.076925077 KPY(ph)TIKKPVGK ddPTM_A459_MK2206_30min_R1 1 KPYTIKKPVGK 11 3 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440-4;P25440-3;P25440;P25440-2;A0A0G2JHN8;A0A140T9I1 H0Y6K2 BRD2 Bromodomain-containing protein 2 1 KPY(0.845)T(0.155)IKKPVGK 66.056 0.042697 0 772.91 673.43 792.11 821.76 793.79 694.92 653.15 760.99 582.51 774.51 TRUE FALSE 707.1699458 629.5895846 738.3437801 885.0520976 762.1716634 734.2657699 609.5795552 754.3367447 643.063999 870.4621461 0.812407465 0.72328198 0.848220435 1.016761156 0.875594266 0.843535555 0.700294158 0.866593393 0.73876159 1 9.76563775 -11.98287749 2.207497984 2.782919743 0.827959735 0.266742249 0.086899257 3857748.8 338001.3568 34635652.4 0.023612988 1.04E-12 11.98287749 -1.954960007 KQALYLMFDTSQES(ph)PVK ddPTM_A459_MK2206_30min_R1 2 KQALYLMFDTSQESPVK 17 1 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KQALYLMFDT(0.002)S(0.002)QES(0.996)PVK;KQALYLMFDTS(0.001)QES(0.999)PVK 117.55 0.00081057 35442000 12984.9 13115.2 13014.5 11697.3 11089.8 9604.9 10807 11258.9 11913.4 11132.8 TRUE FALSE 11880.46607 12261.3981 12131.112 12598.22807 10648.06978 10148.72114 10086.08475 11160.46462 13151.84056 12512.01531 0.949524579 0.979969876 0.969556998 1.006890398 0.851027554 0.811118024 0.806111925 0.891979777 1.051136866 1 13.61102656 -6.259295434 24.99346324 0.887166608 0.97623946 0.179694785 0.074169944 294.5391465 3433646.147 0.023355871 0.028677825 5.50E-07 6.259295434 0.089072852 KQALYLMFDTSQES(ph)PVK ddPTM_A459_MK2206_30min_R2 1 KQALYLMFDTSQESPVK 17 1 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KQALYLMFDT(0.001)S(0.053)QES(0.946)PVK 111.82 0.0010198 2977700 15498 17564 16482 14718 16496 12666 18474 14679 13943 14436 TRUE FALSE 16684.5388 16691.7973 17031.50165 13515.49232 15848.28415 13148.01351 16048.34161 16597.5957 15155.73694 13964.9545 1.194743513 1.195263278 1.219588768 0.967814991 1.134861138 0.941500633 1.149186817 1.188517707 1.085269339 1 13.76952325 -5.730237282 24.98599444 1.075646544 1.202405114 0.401356472 0.075826924 219.4460409 175726.3152 0.02083586 0.036084192 1.86E-06 5.730237282 0.126758569 KQDDS(ph)PPRPIIGPALPPGFIK ddPTM_A459_MK2206_30min_R1 1 KQDDSPPRPIIGPALPPGFIK 21 2 A0A0A0MRI1;Q8IXQ4-4;Q8IXQ4 A0A0A0MRI1 GPALPP1 GPALPP motifs-containing protein 1 1 KQDDS(1)PPRPIIGPALPPGFIK 46.15 0.035501 33933000 7304.6 8425.2 8241.5 7790.3 6733.8 6117.7 6913.9 7271.4 6278.9 5978.5 TRUE FALSE 6683.305412 7876.717949 7682.089942 8390.310256 6465.578487 6464.078887 6452.686346 7207.826916 6931.614124 6719.161715 0.994663575 1.172276882 1.143310768 1.248713844 0.962259693 0.96203651 0.96034098 1.072727108 1.031618886 1 12.71406554 -6.280027854 24.99913138 0.998102701 1.142320212 0.518057318 0.06687874 674.4711363 907075.2628 0.021297847 0.024193706 5.25E-07 6.280027854 0.144217511 KQDDS(ph)PPRPIIGPALPPGFIK ddPTM_A459_MK2206_30min_R2 1 KQDDSPPRPIIGPALPPGFIK 21 2 A0A0A0MRI1;Q8IXQ4-4;Q8IXQ4 A0A0A0MRI1 GPALPP1 GPALPP motifs-containing protein 1 1 KQDDS(1)PPRPIIGPALPPGFIK 47.688 0.031266 23788000 55078 63632 68319 70606 64510 55454 75379 59279 57934 66595 TRUE FALSE 59294.81403 60472.12741 70596.72136 64837.26394 61977.01326 57564.34083 65481.64675 67026.96884 62972.9946 64422.0106 0.920412348 0.938687365 1.095847843 1.00644583 0.962047174 0.893550827 1.016448356 1.040435842 0.977507439 1 15.97526607 -5.025490603 24.86576771 0.997677108 0.924981029 0.24326334 0.049436739 897.6743938 875673.8405 0.013480978 0.036001736 9.43E-06 5.025490603 -0.072696079 KQDLS(ph)S(ph)S(ph)LT(ph)DDSK ddPTM_A459_MK2206_30min_R1 1 KQDLSSSLTDDSK 13 1 Q9NR09;A0A3B3IUB9 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 4 KQDLS(1)S(1)S(1)LT(1)DDSK 69.276 0.041346 27802000 2835.3 2972.9 3222 2425.6 2692.1 2777.6 3596.6 2639.6 3136.8 3955.9 TRUE FALSE 2594.142846 2779.36367 3003.299617 2612.420132 2584.867956 2934.865312 3356.677376 2616.522255 3462.881585 4445.986758 0.583479661 0.625139889 0.675507999 0.587590624 0.581393535 0.660115622 0.754990413 0.588513281 0.77887807 1 12.11828794 -9.486698529 0.435396376 1.051102845 0.610350497 0.813203659 0.054162633 1.703272524 0.430573491 0.203378208 0.033251203 3.26E-10 9.486698529 -0.440752347 KQDLS(ph)S(ph)S(ph)LT(ph)DDSK ddPTM_A459_MK2206_30min_R2 2 KQDLSSSLTDDSK 13 1 Q9NR09;A0A3B3IUB9 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 4 KQDLS(1)S(1)S(1)LT(1)DDSK;KQDLS(1)S(1)S(1)LT(1)DDSK 75.088 0.030732 12303000 23791 22166 23552 29311 23768 20087.6 25201 22869 19241.9 27554 TRUE FALSE 25612.45725 21065.26867 24337.21193 26916.19754 22834.7489 20852.04769 21892.07843 25858.05682 20915.52568 26654.91524 0.960890591 0.790295842 0.913047808 1.009802406 0.856680604 0.78229653 0.821314877 0.970104635 0.784678004 1 14.70211397 -4.443197077 19.14785186 0.879090914 3.705807567 0.074494552 0.084349794 6221670.222 15357983.3 0.020865627 745224324.4 3.60E-05 4.443197077 2.826716653 KQDLSSS(ph)LTDDSK ddPTM_A459_MK2206_30min_R1 1 KQDLSSSLTDDSK 13 1 Q9NR09;A0A3B3IUB9 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 1 KQDLS(0.104)S(0.104)S(0.792)LT(0.001)DDSK 179.39 5.17E-10 0 810.7 927.45 1155.5 802.34 621.33 633.56 710.47 997.95 1051.3 1141.5 TRUE FALSE 741.7457078 867.0728364 1077.067879 864.1363658 596.5811104 669.4316197 663.0758426 989.2250284 1160.586397 1282.917638 0.578170949 0.675860095 0.839545617 0.673571195 0.465019026 0.52180405 0.516849892 0.771074463 0.904646068 1 10.32521284 -8.150993346 2.457120124 0.97461366 0.615742813 0.638298184 0.102903074 0.218235837 2.353950179 0.103011501 0.031634469 7.06E-09 8.150993346 -0.358870847 KQEAESWS(ph)PDACLGVK ddPTM_A459_MK2206_30min_R1 1 KQEAESWSPDACLGVK 16 1 E9PFK9;Q9UJ41;Q9UJ41-4;Q9UJ41-3;A0A0A0MSJ3;Q3HKR1 E9PFK9 RABGEF1 Rab5 GDP/GTP exchange factor 1 KQEAES(0.013)WS(0.987)PDACLGVK 82.034 0.01061 9987500 3320.4 2928.5 3106.6 2990.8 3149.2 2501.2 2951.4 2852 2554.6 2561.9 TRUE FALSE 3037.982544 2737.854118 2895.732647 3221.151934 3023.760695 2642.815783 2754.517491 2827.065265 2820.159812 2879.287513 1.055116076 0.95087903 1.005711529 1.118732297 1.050176713 0.917871442 0.956666355 0.981862788 0.979464468 1 11.49149614 -6.744208437 24.99972115 0.965382761 1.034287222 0.376928184 0.044263228 291.7229561 423248.9653 0.015844064 0.015807305 1.80E-07 6.744208437 0.068904461 KQEAESWS(ph)PDACLGVK ddPTM_A459_MK2206_30min_R2 2 KQEAESWSPDACLGVK 16 1 E9PFK9;Q9UJ41;Q9UJ41-4;Q9UJ41-3;A0A0A0MSJ3;Q3HKR1 E9PFK9 RABGEF1 Rab5 GDP/GTP exchange factor 1 KQEAES(0.065)WS(0.935)PDACLGVK;KQEAES(0.004)WS(0.996)PDACLGVK 80.362 0.011936 9818800 59914 73654 69327 74948 73723 59054 78235 57363 61015 69780 TRUE FALSE 64501.06191 69996.44946 71638.32758 68824.50865 70828.26459 61301.34135 67962.65052 64860.54106 66321.97441 67503.08431 0.955527626 1.036937055 1.061260064 1.019575762 1.049259679 0.908126524 1.006808077 0.960853 0.982502875 1 16.0426658 -6.728590572 24.99998744 0.971408159 1.026969642 0.344330813 0.036387354 209.2905201 159282.6232 0.011673015 0.011672265 1.87E-07 6.728590572 0.055561483 KQEGPATQVDSAVGTLPAT(ph)SPQSTSVQAK ddPTM_A459_MK2206_30min_R1 1 KQEGPATQVDSAVGTLPATSPQSTSVQAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06 E7ETY2 TCOF1 Treacle protein 1 KQEGPATQVDSAVGT(0.007)LPAT(0.492)S(0.492)PQS(0.004)T(0.004)S(0.001)VQAK 123.68 1.64E-13 82147000 4359.5 3946.2 4819 3641.2 4543.4 3708.9 4161.3 4524.2 3642.3 3818.7 TRUE FALSE 3988.701632 3689.301663 4491.899707 3921.645855 4362.426757 3918.894713 3883.70727 4484.645396 4020.930119 4291.789386 0.92937963 0.859618525 1.046626314 0.91375543 1.016458723 0.913114405 0.904915624 1.044936038 0.936888966 1 12.06736356 -5.238311057 24.8999606 0.968688106 0.89449908 0.249021688 0.053635847 1061.530031 1142839.387 0.012983253 0.034304407 5.78E-06 5.238311057 -0.074189026 KQEGPATQVDSAVGTLPAT(ph)SPQSTSVQAK ddPTM_A459_MK2206_30min_R2 2 KQEGPATQVDSAVGTLPATSPQSTSVQAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06 E7ETY2 TCOF1 Treacle protein 1 KQEGPATQVDSAVGTLPAT(0.489)S(0.489)PQS(0.006)T(0.006)S(0.009)VQAK;KQEGPATQVDSAVGTLPAT(0.55)S(0.376)PQS(0.022)T(0.022)S(0.031)VQAK 152.88 6.21E-16 192196000 290570 328210 300420 377180 361290 294000 403460 296240 321100 323560 TRUE FALSE 312816.2626 311911.5687 310435.8529 346363.1875 347103.9393 305188.376 350485.2174 334959.5851 349028.6976 313002.2637 0.999405752 0.996515377 0.991800664 1.10658365 1.108950252 0.975035683 1.119752979 1.070150679 1.115099595 1 18.25581357 -5.747719889 24.99328955 1.073358671 0.995968041 0.354581103 0.046210476 247.8908342 451587.4568 0.01223532 0.021044142 1.79E-06 5.747719889 -0.077390629 KQEGPATQVDSAVGTLPATS(ph)PQSTSVQAK ddPTM_A459_MK2206_30min_R1 1 KQEGPATQVDSAVGTLPATSPQSTSVQAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06 E7ETY2 TCOF1 Treacle protein 1 KQEGPATQVDSAVGTLPAT(0.316)S(0.678)PQS(0.001)T(0.004)S(0.001)VQAK 196.84 7.51E-42 79988000 10773 10713 10685 9451 10294 9523.1 10295 9998 9117.6 8919.9 TRUE FALSE 9856.699779 10015.58175 9959.73197 10178.91766 9883.968182 10062.28969 9608.239334 9910.58854 10065.40715 10024.96455 0.983215424 0.999064056 0.993492986 1.015356972 0.985935474 1.003723219 0.958431253 0.988590881 1.004034188 1 13.29130952 KQEGPATQVDSAVGTLPATS(ph)PQSTSVQAK ddPTM_A459_MK2206_30min_R2 2 KQEGPATQVDSAVGTLPATSPQSTSVQAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06 E7ETY2 TCOF1 Treacle protein 1 KQEGPATQVDSAVGTLPAT(0.11)S(0.829)PQS(0.009)T(0.038)S(0.014)VQAK;KQEGPATQVDSAVGTLPAT(0.244)S(0.71)PQS(0.006)T(0.029)S(0.01)VQAK 162.15 2.21E-19 195442000 348800 422630 351520 420010 408770 361830 431120 372980 329920 385410 TRUE FALSE 375504.3962 401642.8088 363239.5014 385693.8395 392719.6359 375599.6942 374513.4261 421729.7666 358615.8452 372834.1033 1.007162148 1.077269502 0.974265761 1.034491845 1.053336142 1.007417752 1.004504209 1.131145898 0.961864384 1 18.5081743 KQELANSSDATLPDRPLS(ph)PPLTAPPTMK ddPTM_A459_MK2206_30min_R1 1 KQELANSSDATLPDRPLSPPLTAPPTMK 28 2 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 KQELANSSDATLPDRPLS(0.668)PPLT(0.296)APPT(0.035)MK 53.022 0.0053648 11829000 4185.1 3431.6 3473.5 2898.5 3469.8 3186.7 3407.5 3179.3 3316 3175.9 TRUE FALSE 3829.135268 3208.202216 3237.728498 3121.742972 3331.590519 3367.1282 3180.191892 3151.503715 3660.710066 3569.354469 1.072780891 0.898818608 0.907090771 0.874595953 0.933387409 0.943343742 0.89097116 0.882933803 1.025594431 1 11.80144747 -8.271979283 24.54181683 1.012797238 0.921999155 0.293354019 0.053984679 754.8759039 1757678.956 0.049120781 0.013231318 5.35E-09 8.271979283 -0.090798083 KQELEEICHDLEAR ddPTM_A459_MK2206_30min_R1 5 KQELEEICHDLEAR 14 1 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 ;;;; 174.59 5.60E-05 76908900 25582.5 24586.9 25728.6 23690.6 24900.4 22825.4 24896.9 23512.2 21036.6 20110.6 FALSE TRUE 23406.57404 22986.28834 23982.21432 25515.25412 23908.56434 24117.75442 23236.07323 23306.63531 23223.42985 22602.05296 1.035595044 1.017000021 1.06106354 1.128890998 1.057804987 1.067060345 1.028051446 1.031173379 1.027492056 1 14.4641662 -7.319025705 4.811006242 1.023551434 1.062165054 0.322016978 0.028076597 0.318368494 15.61751887 0.013344806 0.008954825 4.80E-08 7.319025705 0.03861362 KQETAAVCGET(ph)DEEAGESGGEGIFR ddPTM_A459_MK2206_30min_R2 1 KQETAAVCGETDEEAGESGGEGIFR 25 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 KQETAAVCGET(0.999)DEEAGES(0.001)GGEGIFR 84.561 0.00013306 3196900 8664.5 10659 9535.9 13325 12950 10638 11321 8902.5 11556 12969 TRUE FALSE 9327.860782 10129.68956 9853.822147 12236.30488 12441.51793 11042.83654 9834.539101 10066.08732 12561.11999 12545.82259 0.743503323 0.807415336 0.785426549 0.975329022 0.991686104 0.880200279 0.78388954 0.80234574 1.001219322 1 13.61491945 -5.736108996 22.63019025 0.906755442 0.781644691 0.408516899 0.076399813 94.02425913 83998.82257 0.022351803 0.038681562 1.84E-06 5.736108996 -0.125110751 KQFS(ph)LENVQEGEILHDAK ddPTM_A459_MK2206_30min_R2 1 KQFSLENVQEGEILHDAK 18 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 KQFS(1)LENVQEGEILHDAK 67.312 0.02044 3131300 27732 24118 20430 25090 20604 17764 25234 15654 17926 20596 TRUE FALSE 29855.18324 22920.33519 21111.126 23040.06674 19794.98343 18440.02147 21920.74549 17700.03155 19485.17108 19923.95421 1.498456729 1.150390879 1.05958515 1.156400306 0.993526849 0.925520169 1.100220632 0.888379453 0.977977106 1 14.28221638 -1.522878745 0.686120744 0.985652925 57.31877799 0.82229761 0.069439889 105.9147551 0.594516234 0.027945566 9130.255591 0.03 1.522878745 56.33312506 KQGGS(ph)PDEPDSK ddPTM_A459_MK2206_30min_R2 4 KQGGSPDEPDSK 12 1 V9GZ50;Q9ULX6;Q9ULX6-2 V9GZ50 AKAP8L A-kinase anchor protein 8-like 1 KQGGS(0.988)PDEPDS(0.012)K;KQGGS(0.815)PDEPDS(0.185)K;KQGGS(0.999)PDEPDS(0.001)K;KQGGS(0.999)PDEPDS(0.001)K 154.13 0.00080887 10532700 49728 32322.4 39222.8 32055.7 45063.5 19307.5 46239.8 86101 51599.6 56409 TRUE FALSE 53535.21391 30717.31662 40530.46858 29436.64677 43294.08056 20042.26044 40168.45872 97354.69633 56087.63994 54568.37895 0.981066598 0.562914223 0.742746429 0.539445139 0.793391363 0.367287078 0.736112369 1.784086282 1.027841417 1 15.73577757 -7.619061814 8.942576036 1.302326612 0.654443127 0.539535777 0.252376505 0.183261052 15.35624554 0.110464297 0.063587931 2.40E-08 7.619061814 -0.647883485 KQISGQYSGS(ph)PQLLK ddPTM_A459_MK2206_30min_R2 1 KQISGQYSGSPQLLK 15 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 KQISGQYS(0.001)GS(0.999)PQLLK 103.45 0.0028971 5313300 25215 40434 34983 39731 48906 39928 43633 31086 47030 42692 TRUE FALSE 27145.47979 38426.10636 36149.31576 36484.85021 46985.70471 41447.48802 37903.93469 35149.04693 51120.58439 41298.96354 0.657292035 0.930437548 0.875308063 0.883432587 1.137696946 1.003596325 0.917793849 0.851087871 1.237817611 1 15.33381795 -4.040155458 0.743551379 1.003712212 5.57E-15 0.448431099 0.112713346 7.472981599 1.415278727 0.043573023 8.094676891 9.12E-05 4.040155458 -1.003712212 KQITTS(ph)PITVR ddPTM_A459_MK2206_30min_R2 1 KQITTSPITVR 11 1 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 KQIT(0.053)T(0.034)S(0.907)PIT(0.006)VR 74.475 0.028289 24358000 59965 63164 56122 77356 64997 69533 67425 55738 56460 59910 TRUE FALSE 64555.96651 60027.36761 57993.07947 71035.76735 62444.8912 72179.12704 58572.01651 63023.14798 61370.78874 57955.14161 1.113895415 1.035755689 1.000654607 1.225702593 1.077469392 1.245430949 1.010644006 1.087447054 1.05893605 1 15.82264904 -8.439195976 1.06040587 1.003257036 1.10482636 0.15034712 0.076790215 1.054033219 2.590324593 0.073580574 0.024221402 3.64E-09 8.439195976 0.101569324 KQMT(ph)LT(ph)RVELLTFQERYY(ph)K ddPTM_A459_MK2206_30min_R1 2 KQMTLTRVELLTFQERYYK 19 3 Q9BXL7 Q9BXL7 CARD11 Caspase recruitment domain-containing protein 11 3 KQMT(0.987)LT(0.987)RVELLT(0.026)FQERY(0.098)Y(0.901)K;KQMT(0.998)LT(0.998)RVELLT(0.006)FQERY(0.091)Y(0.906)K 51.193 0.022134 278180000 8796 6843.3 8828.7 6014.7 6506.6 7177.3 6957.9 6272.1 6868.1 6359.1 TRUE FALSE 8047.85401 6397.799926 8229.432442 6477.953236 6247.428344 7583.672523 6493.751186 6217.263691 7582.063573 7146.913317 1.126060112 0.895183647 1.151466665 0.906398742 0.874143573 1.061111586 0.908609199 0.869922919 1.060886461 1 12.80310457 -5.793979966 24.99999918 0.948208528 1.041331849 0.202604601 0.091500877 307.4155451 236177.3406 0.02468429 0.036616004 1.61E-06 5.793979966 0.093123321 KQMT(ph)LT(ph)RVELLTFQERYY(ph)K ddPTM_A459_MK2206_30min_R2 1 KQMTLTRVELLTFQERYYK 19 3 Q9BXL7 Q9BXL7 CARD11 Caspase recruitment domain-containing protein 11 3 KQMT(0.997)LT(0.997)RVELLT(0.018)FQERY(0.102)Y(0.886)K 41.554 0.038788 6989100 24095 33796 26878 32710 28682 22751 34958 31366 29357 28543 TRUE FALSE 25939.73173 32117.73978 27774.09911 30037.48837 27555.80056 23616.80525 30367.97261 35465.6439 31910.41879 27611.64425 0.939449005 1.16319548 1.005883563 1.087855837 0.997977531 0.855320496 1.099824854 1.284445199 1.155687018 1 14.75298918 -7.519689014 24.97027524 1.170466688 1.014962643 0.274306268 0.100555294 154.4836735 1209378.743 0.045720086 0.027067716 3.02E-08 7.519689014 -0.155504045 KQNS(ph)PVAPTAQPK ddPTM_A459_MK2206_30min_R1 2 KQNSPVAPTAQPK 13 1 Q6P1N0;Q6P1N0-2 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 KQNS(0.991)PVAPT(0.009)AQPK;KQNS(0.968)PVAPT(0.032)AQPK 139.21 0.0017004 18001200 5912.6 6249.8 6297.4 5586.3 5212.9 4688.6 5448.3 5444.9 5921.9 5246.5 TRUE FALSE 5409.702322 5842.936884 5869.950034 6016.557794 5005.259155 4954.06448 5084.853848 5397.295813 6537.502697 5896.476029 0.917446674 0.990920145 0.995501382 1.020365005 0.848856017 0.840173767 0.862354705 0.915342619 1.108713521 1 12.52563728 -8.248394344 24.23530396 1.054356757 0.924368392 0.396978513 0.064327003 508.4878802 944684.4019 0.049644451 0.018481876 5.64E-09 8.248394344 -0.129988365 KQNS(ph)PVAPTAQPK ddPTM_A459_MK2206_30min_R2 2 KQNSPVAPTAQPK 13 1 Q6P1N0;Q6P1N0-2 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 KQNS(1)PVAPTAQPK;KQNS(1)PVAPTAQPK 139.49 0.00047845 86547000 540750 590260 495110 543170 510710 427310 616640 428160 430970 549470 TRUE FALSE 582150.2358 560948.5467 511616.7203 498791.2735 490656.9593 443571.5815 535674.4273 484121.9821 468454.9916 531540.8389 1.095212622 1.055325397 0.962516298 0.93838749 0.923084217 0.834501414 1.007776615 0.910789815 0.881315145 1 19.01982101 -5.235864173 1.648361533 0.922312337 1.104984921 0.599797971 0.047946685 0.319277693 1.432702728 0.013726357 0.069739518 5.81E-06 5.235864173 0.182672585 KQPPVS(ph)PGTALVGSQK ddPTM_A459_MK2206_30min_R1 2 KQPPVSPGTALVGSQK 16 1 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVS(0.994)PGT(0.006)ALVGSQK;KQPPVS(0.607)PGT(0.393)ALVGSQK 198.98 1.58E-06 110421000 14226 13270.2 13211.1 11312.8 10765.9 10705.6 12625 10183 13456.2 13787.4 TRUE FALSE 13016.004 12406.30757 12314.36734 12184.11382 10337.07141 11311.74182 11782.80929 10093.9711 14855.02014 15495.4872 0.839986754 0.800640045 0.79470669 0.786300789 0.667102058 0.730002334 0.760402634 0.6514136 0.958667511 1 13.9195605 -8.380274646 5.802744626 0.9957876 0.754768895 0.723191075 0.055974058 0.124255365 5.14304424 0.056822136 0.014759765 4.17E-09 8.380274646 -0.241018705 KQPPVS(ph)PGTALVGSQK ddPTM_A459_MK2206_30min_R2 2 KQPPVSPGTALVGSQK 16 1 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVS(0.91)PGT(0.09)ALVGSQK;KQPPVS(0.992)PGT(0.008)ALVGSQK 118.71 0.0031265 313904000 354323 277297 270130 297228 266490 227062 388930 274967 211018 322047 TRUE FALSE 381450.2413 263526.8342 279135.9994 272943.5216 256026.2636 235703.0035 337863.0238 310906.131 229371.9642 311538.6328 1.224407509 0.845888139 0.895991604 0.876114526 0.821812246 0.756577126 1.084497999 0.997969749 0.736255283 1 18.24905155 -4.75683159 24.97707213 0.889946342 1.224408018 0.477278364 0.104809718 125.6355225 680938.5214 0.026403715 0.206472046 1.75E-05 4.75683159 0.334461676 KQPPVS(ph)PGTALVGSQKEPSEVPT(ph)PK ddPTM_A459_MK2206_30min_R2 1 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 2 KQPPVS(0.941)PGT(0.057)ALVGS(0.004)QKEPS(0.007)EVPT(0.991)PK 72.009 0.0097045 0 17081 23977 18036 19543 21313 11961 25283 14944 13597 18771 TRUE FALSE 18388.73449 22786.33705 18637.31124 17946.27439 20476.14453 12416.18424 21963.31173 16897.23211 14779.64248 18158.50381 1.012678946 1.25485763 1.02636822 0.988312395 1.127633904 0.683766921 1.209533118 0.93054099 0.813924024 1 14.14835771 -5.864243419 1.214255015 0.950518252 1.131299755 0.161346424 0.149180878 0.877239303 2.595741144 0.053116682 0.121208022 1.37E-06 5.864243419 0.180781504 KQPPVS(ph)PGTALVGSQKEPSEVPTPK ddPTM_A459_MK2206_30min_R2 1 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVS(0.498)PGT(0.498)ALVGS(0.002)QKEPS(0.001)EVPTPK 49.433 0.016193 31748000 81281 116300 99085 125410 137120 105160 144930 110150 127860 112010 TRUE FALSE 87503.93585 110524.7111 102388.4444 115163.6018 131735.9798 109161.9375 125900.5169 124546.9832 138981.0317 108355.1229 0.807566209 1.020022941 0.944934044 1.06283486 1.215779894 1.007446022 1.161924915 1.14943327 1.282643847 1 16.72540784 -3.976921336 0.504420355 1.152497819 0.249804998 0.54054555 0.090148741 7.136580763 0.75544514 0.051190165 4.533890606 0.000105458 3.976921336 -0.902692821 KQPPVSPGT(ph)ALVGSQK ddPTM_A459_MK2206_30min_R1 1 KQPPVSPGTALVGSQK 16 1 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVS(0.265)PGT(0.735)ALVGSQK 95.307 0.01094 135010000 12709 10664 11192 9262.2 8922.1 9834.3 11021 8739.4 12340 12178 TRUE FALSE 11628.03281 9969.771662 10432.31822 9975.576249 8566.713864 10391.10957 10285.8092 8662.992347 13622.78716 13686.70258 0.84958614 0.728427582 0.762222907 0.728851686 0.625915104 0.759212053 0.751518427 0.632949558 0.995330108 1 13.74048729 -8.275056366 24.52346833 0.997665173 0.729073273 0.756569555 0.060767701 323.3155165 582266.5986 0.056859288 0.015019236 5.31E-09 8.275056366 -0.2685919 KQPPVSPGTALVGS(ph)QKEPSEVPTPK ddPTM_A459_MK2206_30min_R2 1 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVS(0.001)PGT(0.01)ALVGS(0.559)QKEPS(0.389)EVPT(0.041)PK 42.209 0.03464 28905000 55123 63615 60396 69239 59914 50076 79681 53270 53346 70009 TRUE FALSE 59343.25926 60455.9716 62409.5725 63581.95222 57561.47532 51981.67727 69218.78899 60232.5719 57985.93865 67724.61206 0.87624362 0.892673576 0.921519823 0.938830807 0.849934367 0.767544851 1.022062539 0.889374927 0.856201858 1 16.0473926 -11.4682006 2.765220847 1.076298357 0.891914706 0.217466294 0.062268988 58842956.23 36221319.04 28929189.37 0.015948155 3.40E-12 11.4682006 -0.184383651 KQPPVSPGTALVGSQKEPS(ph)EVPTPK ddPTM_A459_MK2206_30min_R2 2 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVSPGTALVGS(0.105)QKEPS(0.546)EVPT(0.349)PK;KQPPVSPGT(0.003)ALVGS(0.089)QKEPS(0.707)EVPT(0.201)PK 94.234 3.93E-06 119021000 162548 239580 185333 197706 203930 151655 209362 154637 173685 213090 TRUE FALSE 174992.7999 227682.8056 191511.9097 181552.7874 195922.6835 157426.3373 181872.5179 174848.5868 188791.8073 206136.8908 0.848915491 1.104522363 0.929052093 0.880738943 0.950449397 0.76369803 0.882290003 0.848215893 0.915856481 1 17.65324319 -5.516921324 17.63258676 0.883775819 0.986735939 0.139472632 0.082185964 7.869964313 23285.92946 0.020862073 0.038241526 3.04E-06 5.516921324 0.10296012 KQPPVSPGTALVGSQKEPSEVPT(ph)PK ddPTM_A459_MK2206_30min_R1 2 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVSPGTALVGS(0.019)QKEPS(0.055)EVPT(0.926)PK;KQPPVSPGTALVGS(0.003)QKEPS(0.063)EVPT(0.934)PK 69.088 0.0018478 252060000 22149 21639 19092.1 20231.6 13333 11875.6 11330.4 16255 13021.2 8996.4 TRUE FALSE 20265.11124 20230.29717 17796.18145 21789.84134 12801.91838 12547.98621 10574.56969 16112.88425 14374.80034 10110.94195 2.004275303 2.000832095 1.760091348 2.155075308 1.266144978 1.241030388 1.04585406 1.59360862 1.421707335 1 13.30362979 -6.270674333 24.67616131 1.279276419 1.965838973 0.787352078 0.182770955 260.6060279 696348.334 0.057131634 0.065698008 5.36E-07 6.270674333 0.686562553 KQQCEELVT(ph)GT(ph)VRT(ph)FS(ph)LK ddPTM_A459_MK2206_30min_R2 1 KQQCEELVTGTVRTFSLK 18 2 O95219-2;O95219 O95219-2;O95219 SNX4 Sorting nexin-4 4 KQQCEELVT(1)GT(1)VRT(1)FS(1)LK 59.862 0.018506 5165700 3724.5 6228.4 5051.4 6185.6 6418.6 4232.9 6381.7 5247.2 5040.6 5041.8 TRUE FALSE 4009.650584 5919.106713 5219.811155 5680.216693 6166.573513 4393.985976 5543.775124 5933.027056 5479.022277 4877.286479 0.822106842 1.213606529 1.070228533 1.16462642 1.264345152 0.900907912 1.136651527 1.216460645 1.123375119 1 12.251863 -4.751086137 24.99035291 1.125744552 0.82210621 0.430419373 0.10307323 415.9756504 1004002.62 0.02509794 0.345644013 1.77E-05 4.751086137 -0.303638342 KQQQEPTGEPS(ph)PK ddPTM_A459_MK2206_30min_R1 5 KQQQEPTGEPSPK 13 1 F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5;P52926-2;P52926 F5H2U8 HMGA2 High mobility group protein HMGI-C 1 KQQQEPTGEPS(1)PK;KQQQEPT(0.009)GEPS(0.991)PK;KQQQEPTGEPS(1)PK;KQQQEPT(0.034)GEPS(0.966)PK;KQQQEPTGEPS(1)PK 151.49 0.00083343 111386900 18474.67 23667 22762.89 23009.21 12604.12 12044.25 13577.09 15865.77 16750.49 15489.96 TRUE FALSE 16903.3023 22126.274 21217.80845 24781.38334 12102.07121 12726.18503 12671.3871 15727.05725 18491.76338 17408.97319 0.970953434 1.270969503 1.21878575 1.423483342 0.695162838 0.73101296 0.727865277 0.903387987 1.062197246 1 14.08754349 -6.266679384 24.99959999 0.836057254 1.224452241 0.582658358 0.152056587 310.6876459 1482260.922 0.048260772 0.056353566 5.41E-07 6.266679384 0.388394986 KQQQEPTGEPS(ph)PK ddPTM_A459_MK2206_30min_R2 6 KQQQEPTGEPSPK 13 1 F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5;P52926-2;P52926 F5H2U8 HMGA2 High mobility group protein HMGI-C 1 KQQQEPT(0.043)GEPS(0.957)PK;KQQQEPT(0.003)GEPS(0.997)PK;KQQQEPTGEPS(1)PK;KQQQEPT(0.025)GEPS(0.975)PK;KQQQEPTGEPS(1)PK;KQQQEPT(0.006)GEPS(0.994)PK 164.53 0.00065128 106577200 256371.5 238606.9 244009.1 206846.5 201004.7 154501.8 267663 215951.8 172289.3 242051.5 TRUE FALSE 275999.4992 226758.0283 252144.2416 189946.4793 193112.2455 160381.4743 232518.5266 244177.4417 187274.7119 234153.3794 1.178712432 0.968416637 1.076833665 0.811205372 0.824725426 0.684941959 0.993018026 1.042809813 0.799795042 1 17.83709433 -5.751651684 24.94919664 0.875624255 1.064030549 0.382299374 0.113362174 226.693317 577843.8257 0.032145663 0.054800709 1.77E-06 5.751651684 0.188406294 KQS(ph)AGPNSPTGGGGGGGSGGTR ddPTM_A459_MK2206_30min_R1 1 KQSAGPNSPTGGGGGGGSGGTR 22 1 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 KQS(0.985)AGPNS(0.015)PTGGGGGGGSGGTR 84.674 0.00033886 3978000 859.28 831.58 880.03 938.64 985.21 963.69 867.29 845.54 604.17 506.14 TRUE FALSE 786.1937237 777.4439909 820.2960155 1010.934215 945.9669995 1018.253295 809.4346666 838.1475329 666.9756335 568.8444444 1.382089131 1.366707539 1.442039249 1.777171642 1.662962535 1.790038217 1.422945543 1.473421321 1.172509708 1 9.151890378 -8.325900138 1.63055277 0.998869116 1.562633113 0.625809503 0.144809523 0.25880879 1.36138417 0.152646848 0.045389122 4.72E-09 8.325900138 0.563763996 KQS(ph)EELQSVQAQEGALGTK ddPTM_A459_MK2206_30min_R2 1 KQSEELQSVQAQEGALGTK 19 1 Q9BU64-2;Q9BU64 Q9BU64-2 CENPO Centromere protein O 1 KQS(0.951)EELQS(0.049)VQAQEGALGTK 60.388 0.020213 10083000 59730 56481 54646 51708 48300 36593 48324 33114 39266 51462 TRUE FALSE 64302.97472 53676.23567 56467.87037 47483.29099 46403.49931 37985.57226 41979.00075 37442.1135 42681.2857 49782.79915 1.291670533 1.078208469 1.134284759 0.953809183 0.932119127 0.763026043 0.843243077 0.752109446 0.857350057 1 15.60335973 -5.725542377 0.971403475 0.826865185 1.241151747 0.754266607 0.080384202 0.310947052 0.539505617 0.030383024 0.098942822 1.88E-06 5.725542377 0.414286562 KQS(ph)LGELIGTLNAAK ddPTM_A459_MK2206_30min_R1 3 KQSLGELIGTLNAAK 15 1 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 1 KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK 128.29 0.00050431 482264300 20833.29 21572.5 21801 19206.04 20027.4 17092.87 19395.2 19153.7 18093.7 16527.68 TRUE FALSE 19061.30929 20168.12633 20321.20886 20685.29253 19229.66625 18060.65353 18101.3816 18986.24122 19974.60486 18575.25378 1.02616683 1.085752398 1.093993606 1.113594074 1.035230338 0.972296462 0.97448906 1.022125536 1.075334157 1 14.1810943 -6.48800649 6.752687032 1.007538823 1.080748969 0.494605436 0.033857683 0.183053776 26.55856687 0.011368764 0.012591005 3.25E-07 6.48800649 0.073210146 KQS(ph)LGELIGTLNAAK ddPTM_A459_MK2206_30min_R2 5 KQSLGELIGTLNAAK 15 1 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 1 KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK 165.66 0.00015233 380949360 454364 555186 457693 534436 489019 396974.7 536207 430984 417888 492182 TRUE FALSE 489150.4572 527616.2706 472952.2562 490770.8692 469817.6569 412081.8504 465802.3768 487315.0886 454235.1429 476122.1416 1.027363389 1.108153191 0.993342285 1.030766743 0.986758682 0.865496087 0.978325383 1.023508562 0.954030706 1 18.8609722 -5.838496532 1.467391629 0.965930945 1.061858386 0.367836113 0.046859591 0.445634228 1.947084936 0.016353926 0.034461761 1.45E-06 5.838496532 0.095927441 KQS(ph)LMLMAT(ph)SNEGSEVTY(ph)EQGVK ddPTM_A459_MK2206_30min_R2 1 KQSLMLMATSNEGSEVTYEQGVK 23 1 A0A075B6H5 A0A075B6H5 TRBV20OR9-2 3 KQS(0.85)LMLMAT(0.569)S(0.575)NEGS(0.045)EVT(0.182)Y(0.779)EQGVK 47.814 0.027693 6792600 5760.5 6263 6948.8 7508.5 6139.1 6057.4 7676.9 6827.3 5712.3 7448.2 TRUE FALSE 6201.528309 5951.988527 7180.469524 6895.031531 5898.048087 6287.918602 6668.913808 7719.651552 6209.145529 7205.165844 0.860705838 0.826072384 0.996572415 0.956956673 0.818586028 0.872695888 0.92557395 1.071405117 0.861763027 1 12.81481592 -7.530804647 24.98604959 0.979648362 0.891301036 0.24494487 0.069962587 279.2912174 880438.0721 0.033123097 0.019167176 2.95E-08 7.530804647 -0.088347326 KQS(ph)TQDEDAVSLCSLDISEPSNKR ddPTM_A459_MK2206_30min_R2 1 KQSTQDEDAVSLCSLDISEPSNKR 24 2 C9J5K8;C9J609;C9JNF2;E9PG37;Q9NR81-2 C9J5K8 ARHGEF3 1 KQS(0.758)T(0.241)QDEDAVS(0.001)LCSLDISEPSNKR 48.321 0.020422 3300200 8756.2 7805.6 9247 8033.7 6409.7 4849.1 6580.7 5536.7 4653.7 6173.5 TRUE FALSE 9426.581404 7417.985254 9555.290365 7377.321011 6158.022972 5033.635898 5716.646185 6260.3657 5058.470414 5972.059201 1.578447414 1.242115157 1.599999271 1.235306075 1.03113897 0.842864367 0.957232002 1.048275894 0.847022818 1 12.54401275 -6.137595738 2.555086518 0.945101483 1.449978396 0.812698556 0.112082423 0.114512785 1.458379743 0.033687942 0.046376545 7.28E-07 6.137595738 0.504876913 KQSAGPNS(ph)PTGGGGGGGSGGTR ddPTM_A459_MK2206_30min_R2 4 KQSAGPNSPTGGGGGGGSGGTR 22 1 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 KQS(0.006)AGPNS(0.921)PT(0.06)GGGGGGGS(0.004)GGT(0.009)R;KQSAGPNS(0.549)PT(0.434)GGGGGGGS(0.002)GGT(0.015)R;KQSAGPNS(0.496)PT(0.496)GGGGGGGS(0.004)GGT(0.004)R;KQS(0.063)AGPNS(0.755)PT(0.137)GGGGGGGS(0.032)GGT(0.013)R 90.454 0.00020818 12778800 11482.81 22559.9 15451.29 19877.3 19601.7 20505.3 22048.5 13449.5 18856.8 13233.81 TRUE FALSE 12361.94276 21439.60817 15966.4283 18253.26101 18832.03877 21285.64356 19153.50547 15207.39583 20496.93038 12801.99186 0.965626513 1.67470878 1.247183131 1.425814139 1.471024116 1.662682166 1.496134794 1.187892946 1.601073536 1 13.64408068 -10.58952342 4.256146004 0.999956472 1.42240766 0.252958185 0.213417395 22809391.73 11350204.91 8961.871299 0.048560609 2.57E-11 10.58952342 0.422451188 KQSFDDNDS(ph)EELEDK ddPTM_A459_MK2206_30min_R2 2 KQSFDDNDSEELEDK 15 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KQSFDDNDS(1)EELEDK;KQSFDDNDS(1)EELEDK 108.17 0.0025048 7903000 112215 71813 80622 68906 57950 47151 99922 69001 53740 99485 TRUE FALSE 120806.2667 68246.87085 83309.89724 63276.15938 55674.59182 48945.36435 86802.12137 78019.66762 58414.20806 96238.8126 1.255275948 0.709140824 0.865657992 0.657491065 0.578504559 0.50858238 0.901945058 0.810688178 0.606971413 1 16.55433122 -3.337872596 11.24419235 0.769855189 0.894435198 0 0.21554925 0 0 0.048784204 0 0.000459333 3.337872596 0.124580009 KQSFDDNDS(ph)EELEDKDSK ddPTM_A459_MK2206_30min_R2 4 KQSFDDNDSEELEDKDSK 18 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KQS(0.115)FDDNDS(0.51)EELEDKDS(0.375)K;KQS(0.005)FDDNDS(0.993)EELEDKDS(0.001)K;KQS(0.026)FDDNDS(0.971)EELEDKDS(0.003)K;KQS(0.017)FDDNDS(0.982)EELEDKDSK 88.239 0.0074342 354130000 199250 177796 183284.6 127478.1 164894.2 90163.3 212685 151805.8 115020.8 219460 TRUE FALSE 214504.7332 168966.9092 189395.2171 117062.7314 158419.6252 93594.52756 184759.204 171647.3393 125025.1013 212299.0382 1.010389567 0.795891072 0.892115286 0.551404907 0.746209811 0.44086176 0.870278102 0.808516801 0.588910352 1 17.69573831 -3.30092038 11.32807926 0.756083631 0.86782965 0 0.181479522 0 0 0.040734687 0 0.000500126 3.30092038 0.111746019 KQSFDDNDSEELEDKDS(ph)K ddPTM_A459_MK2206_30min_R1 1 KQSFDDNDSEELEDKDSK 18 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KQSFDDNDS(0.041)EELEDKDS(0.959)K 52.42 0.03206 11981000 2702.1 3020.5 2999.7 2737.9 2269 1480.8 2309.7 2137.9 2510.4 2078.8 TRUE FALSE 2472.272206 2823.864901 2796.088722 2948.773532 2178.620925 1564.641616 2155.624127 2119.208566 2771.365064 2336.337438 1.058182849 1.208671682 1.196782912 1.26213512 0.932494121 0.669698474 0.922651023 0.907064421 1.186200682 1 11.19003294 -6.27584368 21.79104371 0.917686874 1.184483689 0.464962008 0.127846815 126.1460781 190834.7767 0.041051479 0.046858535 5.30E-07 6.27584368 0.266796816 KQT(ph)DFEHR ddPTM_A459_MK2206_30min_R1 1 KQTDFEHR 8 1 Q01813;Q01813-2;B1APP6 Q01813 PFKP "ATP-dependent 6-phosphofructokinase, platelet type" 1 KQT(1)DFEHR 92.925 0.030929 1473600 358.46 293.72 343.22 299.18 512.91 328.93 402.77 262.36 155.25 383.71 TRUE FALSE 327.9710947 274.5987746 319.9231827 322.2228954 492.4797086 347.5537323 375.9019482 260.0662142 171.3887931 431.2468917 0.760518165 0.636755371 0.741856205 0.747188911 1.141990164 0.805927507 0.871662974 0.603056438 0.397426153 1 8.752370248 -9.672000571 15.654809 0.999999719 0.754928863 0.148151802 0.18197379 0 0 0.18801242 0.04559971 2.13E-10 9.672000571 -0.245070857 KQT(ph)T(ph)Y(ph)QSDYDK ddPTM_A459_MK2206_30min_R1 1 KQTTYQSDYDK 11 1 Q8N6G2 Q8N6G2 TEX26 Testis-expressed sequence 26 protein 3 KQT(0.992)T(0.918)Y(0.914)QS(0.073)DY(0.103)DK 62.088 0.029969 24245000 3912 2459.5 4837.4 2973.2 3940.5 3700.9 4088.8 3875.3 2929.4 3546.3 TRUE FALSE 3579.263857 2299.386103 4509.050766 3202.196379 3783.541541 3910.44176 3816.043612 3841.418661 3233.921613 3985.642417 0.898039383 0.57691731 1.131323459 0.803432934 0.949292773 0.981132111 0.957447561 0.963814176 0.811392813 1 11.96059657 -5.257026008 24.9998065 0.944593822 0.737478366 0.357689389 0.113603789 375.7444726 2128408.381 0.026950346 0.066341507 5.53E-06 5.257026008 -0.207115455 KQY(ph)RPDMMS(ph)LQIQMY(ph)QLS(ph)R ddPTM_A459_MK2206_30min_R1 1 KQYRPDMMSLQIQMYQLSR 19 2 A0A3B3IRT3;O60343-2;O60343-3;O60343;O60343-4;O60343-5 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 4 KQY(1)RPDMMS(1)LQIQMY(1)QLS(1)R 43.208 0.046769 0 0 255.46 72.828 174.92 0 239.6 280.18 280.96 236.84 169.92 TRUE FALSE 0 238.8295076 67.88463827 188.3923687 0 253.1659449 261.4897034 278.5035963 261.4603655 190.9709724 0 1.250606333 0.355470978 0.986497405 0 1.325677624 1.369264135 1.458355648 1.36911051 1 7.577209555 -6.824235486 14.24423166 1.33748324 0.576179569 0.509327037 0.382954203 1.20760834 272.65855 0.125687758 0.11085474 1.50E-07 6.824235486 -0.761303671 KRAEFTVETR ddPTM_A459_MK2206_30min_R1 2 KRAEFTVETR 10 2 P21333-2;P21333;Q60FE5;A0A087WWY3;F8WE98 P21333-2 FLNA Filamin-A 0 ; 92.866 0.016506 14737700 8137.6 8769.3 8519.6 9026.5 10309.4 9402 8757.7 8878.9 7595.3 5915.8 FALSE TRUE 7445.454388 8198.416976 7941.313289 9721.722594 9898.754767 9934.333115 8173.489812 8801.272713 8384.858615 6648.693966 1.119837133 1.233086831 1.194417028 1.462200342 1.488826951 1.49417813 1.229337649 1.323759637 1.261128675 1 12.69885526 -8.957511247 1.319748254 1.000000913 1.3270578 0.373516905 0.122897462 2.115266864 5.118562871 0.13091295 0.038889682 1.10E-09 8.957511247 0.327056888 KRDFTNEAPPAPLPDASASPLS(ph)PHR ddPTM_A459_MK2206_30min_R1 1 KRDFTNEAPPAPLPDASASPLSPHR 25 2 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 KRDFTNEAPPAPLPDAS(0.064)AS(0.291)PLS(0.645)PHR 52.463 0.0091166 9000400 3154.7 2847.9 3228.5 3408 3654.9 2624 2734.3 3490.1 2060.9 1847.2 TRUE FALSE 2886.376199 2662.501192 3009.358415 3670.484751 3509.317594 2772.568612 2551.899836 3459.586424 2275.13793 2076.045082 1.390324432 1.282487175 1.449563134 1.768017845 1.690386025 1.335505012 1.229212149 1.666431261 1.09590006 1 11.01962206 -8.398734007 5.44357676 1.005661591 1.472127456 0.501548224 0.171788849 0.195247199 7.289161296 0.178859269 0.046497817 3.99E-09 8.398734007 0.466465865 KREDDDDDDDDDDDYDNL ddPTM_A459_MK2206_30min_R2 1 KREDDDDDDDDDDDYDNL 18 2 Q16594 Q16594 TAF9 Transcription initiation factor TFIID subunit 9 0 79.652 0.048045 20452000 31309 35518 32602 23995 25561 22843 32130 23278 21517 35213 FALSE TRUE 33706.04111 33754.22777 33688.93441 22034.53174 24557.34671 23712.30637 27911.2924 26320.51453 23388.50977 34064.00269 0.9894915 0.990906091 0.988989307 0.646856799 0.720917824 0.696110395 0.819377941 0.772678266 0.686604859 1 15.05596035 -5.744880419 24.9631372 0.751530122 0.98990682 0.554141255 0.092720083 160.2750605 241617.5722 0.023793301 0.04106231 1.80E-06 5.744880419 0.238376699 KREDS(ph)APPSSVAR ddPTM_A459_MK2206_30min_R2 1 KREDSAPPSSVAR 13 2 Q9BZE4-2;Q9BZE4;Q9BZE4-3 Q9BZE4-2 GTPBP4 Nucleolar GTP-binding protein 1 1 KREDS(1)APPSSVAR 59.634 0.037527 3618300 18868 23764 23396 25827 27836 21367 40773 24715 22705 28337 TRUE FALSE 20312.54859 22583.91432 24176.01096 23716.85148 26743.01878 22180.13616 35419.45612 27945.33536 24679.83986 27412.36601 0.740999466 0.82385863 0.881938135 0.86518805 0.975582289 0.809128849 1.292097738 1.019442661 0.900317756 1 14.74253923 -6.102676794 0.76000634 1.03518607 0.77079767 0.379803986 0.115493681 0.848233063 1.008552273 0.064446043 0.139343116 7.89E-07 6.102676794 -0.264388401 KREEGS(ph)DIEDEDMEELLNDTR ddPTM_A459_MK2206_30min_R1 5 KREEGSDIEDEDMEELLNDTR 21 2 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR 106.39 5.46E-05 45044900 9953.2 10913.3 11002.8 10293.6 9887.2 8932.5 9202.53 10596.4 9513.87 8467.54 TRUE FALSE 9106.628074 10202.84219 10255.96059 11086.41486 9493.371888 9438.250431 8588.646015 10503.75679 10502.87083 9516.562782 0.956924079 1.07211421 1.077695889 1.164959987 0.997563102 0.991770942 0.902494547 1.103734303 1.103641207 1 13.21622488 KREEGS(ph)DIEDEDMEELLNDTR ddPTM_A459_MK2206_30min_R2 10 KREEGSDIEDEDMEELLNDTR 21 2 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(0.998)DIEDEDMEELLNDT(0.002)R;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR 118.66 2.94E-05 92237100 273371 316915 293700 296213 313831 260569.8 338384 244308 242726.7 324729 TRUE FALSE 294300.4939 301177.4619 303491.8114 272011.4504 301508.4181 270485.9663 293953.7743 276239.8944 263838.6296 314133.1193 0.936865538 0.958757429 0.966124846 0.865911404 0.959810983 0.861055233 0.935761804 0.87937208 0.839894342 1 18.26101653 -5.743232707 24.99674928 0.902559064 0.954400103 0.178283342 0.046764286 378.3707386 519477.8548 0.011968913 0.020680137 1.81E-06 5.743232707 0.051841039 KRESESESDET(ph)PPAAPQLIK ddPTM_A459_MK2206_30min_R2 1 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 KRES(0.006)ES(0.007)ES(0.007)DET(0.98)PPAAPQLIK 71.527 0.031405 12251000 39691 44743 45390 44525 47655 39047 50708 45209 45046 50509 TRUE FALSE 42729.77348 42521.12768 46903.27995 40887.16507 45783.82525 40532.96095 44049.97869 51117.97153 48964.01966 48860.89547 0.874518837 0.870248637 0.959934923 0.836807526 0.937023868 0.829558291 0.901538506 1.046193915 1.002110567 1 15.57639268 -7.707887742 6.553287138 1.017927495 0.886334005 0.692063813 0.039473992 0.102210157 9.362092209 0.018021785 0.010157977 1.96E-08 7.707887742 -0.13159349 KRKMY(ph)S(ph)EDK ddPTM_A459_MK2206_30min_R1 1 KRKMYSEDK 9 3 Q5BKY9-2;Q5BKY9;H0YH72 Q5BKY9-2 FAM133B Protein FAM133B 2 KRKMY(1)S(1)EDK 59.35 0.04354 8490100 1543 1104.6 1037.4 885.86 3816.6 3202.9 3398.8 1349.2 936.94 979.06 TRUE FALSE 1411.759747 1032.690339 966.9841784 954.0890907 3664.57674 3384.24543 3172.072253 1337.404087 1034.338266 1100.353344 1.283005822 0.93850793 0.878794238 0.867075195 3.330363614 3.075598804 2.882776037 1.215431473 0.940005564 1 10.10375116 -6.21470873 24.91845913 2.175317373 0.979960234 0.29431124 0.811813842 520.6183959 277612.0966 0.261138277 0.337126866 6.10E-07 6.21470873 -1.19535714 KRPSLPSSPS(ph)PGLPK ddPTM_A459_MK2206_30min_R2 1 KRPSLPSSPSPGLPK 15 2 O43294-2;O43294;H3BQC4;H3BSN4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 KRPSLPS(0.001)S(0.002)PS(0.997)PGLPK 57.425 0.037144 13936000 189520 166690 182570 192760 160340 112050 218570 172450 154220 198200 TRUE FALSE 204029.7969 158412.417 188656.7927 177010.8914 154044.246 116314.1413 189871.4965 194989.8071 167633.7768 191732.7502 1.064136391 0.826214701 0.983957057 0.923216775 0.803432099 0.606647227 0.990292458 1.016987483 0.874309562 1 17.54873726 -10.22981746 10.59500913 0.999997871 0.894656738 0.054250699 0.125695788 0 0 0.126715026 0.030732908 5.89E-11 10.22981746 -0.105341133 KRQS(ph)PEPSPVTLGR ddPTM_A459_MK2206_30min_R2 2 KRQSPEPSPVTLGR 14 2 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 KRQS(1)PEPSPVTLGR;KRQS(1)PEPSPVTLGR 73.415 0.019194 24314000 89596 138576 111485 149324 134048 152566 163100 122464 114794 141506 TRUE FALSE 96455.53865 131694.5173 115201.8543 137123.7515 128784.602 158372.006 141684.7741 138470.4653 124778.5746 136888.6708 0.704627622 0.962055637 0.841573328 1.001717313 0.940798104 1.156940199 1.035036525 1.011555335 0.911533247 1 17.06264353 -3.878947317 0.675035558 1.016481738 2.88E-19 0.555050971 0.076712899 7.249137859 1.01294591 0.032377859 7.480742818 0.000132146 3.878947317 -1.016481738 KRS(ph)DSSGGYNLSDIIQSPSSTGLLK ddPTM_A459_MK2206_30min_R1 1 KRSDSSGGYNLSDIIQSPSSTGLLK 25 2 E9PDR5;Q9P2D0-2;Q9P2D0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 KRS(0.306)DS(0.306)S(0.241)GGY(0.136)NLS(0.012)DIIQSPSSTGLLK 60.464 0.0077433 7873800 2006.7 2096.9 2284.1 1963.1 1384.8 1271 1270 1349.5 1113.3 822.03 TRUE FALSE 1836.019627 1960.391429 2129.061656 2114.298302 1329.640484 1342.962922 1185.280617 1337.701464 1229.031519 923.8692824 1.987315373 2.121935934 2.304505298 2.288525382 1.439208456 1.453628719 1.282952729 1.447933695 1.330308889 1 9.85154493 -6.313094996 5.208814697 1.344817223 2.181511623 0.888045296 0.147882693 0.065569799 4.055669565 0.046113077 0.053231814 4.86E-07 6.313094996 0.8366944 KRS(ph)PTESVNTPVGK ddPTM_A459_MK2206_30min_R2 1 KRSPTESVNTPVGK 14 2 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 KRS(0.967)PT(0.033)ESVNTPVGK 81.904 0.034985 6365200 25341 29603 28950 32213 29844 26678 36842 26920 22400 34517 TRUE FALSE 27281.12644 28132.95807 29915.17855 29581.09486 28672.17461 27693.24998 32004.60114 30438.53643 24348.31151 33390.71312 0.817027368 0.842538402 0.895913137 0.88590785 0.8586871 0.829369828 0.958488099 0.911586893 0.729194115 1 15.02715928 -12.04900292 2.401023528 3.497463347 0.863783227 0.337908835 0.058938926 2732420.47 1128796.22 35599266.94 0.014664864 8.93E-13 12.04900292 -2.63368012 KRSES(ph)PPAELPSLR ddPTM_A459_MK2206_30min_R2 1 KRSESPPAELPSLR 14 2 Q14669;Q14669-2;Q14669-3;G5E9G6;H7C1L9 Q14669;H7C1L9 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 KRS(0.052)ES(0.947)PPAELPS(0.002)LR 76.526 0.047524 18117000 23827 72787 46956 65335 71353 73080 59190 40091 63802 42531 TRUE FALSE 25651.21344 69172.50342 48521.4896 59996.9215 68551.3227 75861.11061 51418.2819 45331.03135 69351.38263 41143.21695 0.623461541 1.681261422 1.179331447 1.458245756 1.666163411 1.843830313 1.249738978 1.101786265 1.685609142 1 15.32836698 -5.765797743 24.20610192 1.453235066 1.213342436 0.104367959 0.345012943 184.9104966 1026995.905 0.095472685 0.147466861 1.71E-06 5.765797743 -0.23989263 KS(ph)FQMSNT(ph)SQPDPS(ph)RPGT(ph)ERTS(ph)SK ddPTM_A459_MK2206_30min_R2 1 KSFQMSNTSQPDPSRPGTERTSSK 24 3 A0A494C0W1;Q5U4N7 A0A494C0W1 GDF5OS "Protein GDF5OS, mitochondrial" 5 KS(0.5)FQMS(0.5)NT(0.516)S(0.516)QPDPS(0.977)RPGT(0.952)ERT(0.296)S(0.371)S(0.371)K 46.953 0.04117 0 23790 25139 24314 22478 25583 21062 26047 24588 20112 25795 TRUE FALSE 25611.38069 23890.63382 25124.61662 20641.4755 24578.48288 21863.52917 22626.99761 27801.73602 21861.30541 24953.31126 1.026372028 0.957413369 1.006865035 0.827203864 0.984978812 0.876177472 0.906773349 1.114150172 0.876088355 1 14.60694365 -9.984310978 7.84828275 1 0.952989101 0.029777042 0.080669108 0 0 0.075731974 0.018367702 1.04E-10 9.984310978 -0.047010899 KS(ph)FTPDHVVYAR ddPTM_A459_MK2206_30min_R1 2 KSFTPDHVVYAR 12 1 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 KS(0.995)FT(0.005)PDHVVYAR;KS(1)FTPDHVVYAR 111.66 0.0034417 84768000 13060.2 9580.1 8922.2 8152.5 11069.6 9889 9479.6 10510.6 6563.7 5065.5 TRUE FALSE 11949.36141 8956.433749 8316.585923 8780.406963 10628.67439 10448.90663 8847.233181 10418.70693 7246.020103 5693.052383 2.098937548 1.573221735 1.46083074 1.542302156 1.866955313 1.835378622 1.554040361 1.830073962 1.272782967 1 12.47498666 -8.459132745 3.659676923 1.003543026 1.702867335 0.62567103 0.185678264 0.137392752 3.698395308 0.181466446 0.047868046 3.47E-09 8.459132745 0.69932431 KS(ph)FTPDHVVYAR ddPTM_A459_MK2206_30min_R2 1 KSFTPDHVVYAR 12 1 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 KS(0.676)FT(0.324)PDHVVYAR 91.961 0.015342 12355000 47945 54850 42297 51701 65340 50133 58859 36221 47504 49130 TRUE FALSE 51615.70606 52126.22876 43707.16087 47476.86292 62774.42329 52040.84644 51130.7426 40955.20907 51635.81205 47526.89212 1.086031587 1.096773351 0.919630107 0.998947349 1.320819025 1.094976846 1.075827606 0.861727061 1.086454631 1 15.53645644 -7.562608724 24.96658667 0.978209784 1.085771296 0.158239426 0.107867774 295.4212389 185641.5179 0.053270628 0.030755849 2.74E-08 7.562608724 0.107561512 KS(ph)GIPTSEPGSQ ddPTM_A459_MK2206_30min_R2 1 KSGIPTSEPGSQ 12 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 KS(0.999)GIPT(0.001)SEPGSQ 101.43 0.031958 0 17650 27752 23960 26071 19361 21109 22608 16448 17267 16525 TRUE FALSE 19001.29757 26373.87604 24758.81444 23940.9159 18600.78986 21912.31779 19639.54244 18597.81007 18768.85245 15985.7906 1.188636711 1.649832447 1.548801373 1.497637277 1.163582729 1.370737196 1.228562473 1.163396327 1.174095978 1 13.96450248 -7.301863872 0.513957579 1.031147201 1.500455207 0.525433065 0.135862061 0.726593844 0.412622148 0.132082746 0.112774085 4.99E-08 7.301863872 0.469308006 KS(ph)KSPPKVPIVIQDDSLPAGPPPQIR ddPTM_A459_MK2206_30min_R2 1 KSKSPPKVPIVIQDDSLPAGPPPQIR 26 3 Q7Z422-4;Q7Z422-5;Q7Z422 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 1 KS(0.551)KS(0.448)PPKVPIVIQDDS(0.001)LPAGPPPQIR 45.579 0.041981 3643000 5308.1 9316.6 6732 7358.7 11447 6007.2 9369.1 7766.2 6688.9 8889.6 TRUE FALSE 5714.492217 8853.951192 6956.44152 6757.470671 10997.53326 6235.808205 8138.925916 8781.269005 7270.688431 8599.53308 0.664511918 1.029585108 0.808932468 0.785795067 1.27885237 0.725133347 0.946438119 1.021133232 0.845474791 1 13.07004261 -4.748541786 24.9428202 0.934072436 0.66451126 0.226561215 0.151402151 945.9667064 1829305.446 0.036156643 0.652353378 1.78E-05 4.748541786 -0.269561176 KS(ph)LPEEDVAEIQHAEEFLIKPESK ddPTM_A459_MK2206_30min_R1 1 KSLPEEDVAEIQHAEEFLIKPESK 24 2 O60832;H7C2Q9;H7C0M1;C9IYT0;O60832-2 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 KS(1)LPEEDVAEIQHAEEFLIKPESK 91.202 1.87E-05 7236700 6110.4 7246 6237.6 6028.6 5411.9 5111 5078.8 6444 5568.6 4097.2 TRUE FALSE 5590.678393 6774.284083 5814.209091 6492.923817 5196.332563 5400.380403 4740.002519 6387.660787 6147.475897 4604.792068 1.214100074 1.471137889 1.262643135 1.410036267 1.128461934 1.172773998 1.029362987 1.387176813 1.335017044 1 12.1689203 -6.263159783 24.99810698 1.187384605 1.343395224 0.273017498 0.130184024 229.9426226 3341147.525 0.039961113 0.047735249 5.46E-07 6.263159783 0.156010618 KS(ph)LSPGVSR ddPTM_A459_MK2206_30min_R1 1 KSLSPGVSR 9 1 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KS(0.5)LS(0.5)PGVSR 120.03 0.012046 28543000 5639.4 5329.4 4636.8 4914.1 7513.5 6463.4 6338 6278.9 3105.2 2373.6 TRUE FALSE 5159.739416 4982.455091 4322.066935 5292.584833 7214.221385 6829.352122 5915.203584 6224.004239 3427.996652 2667.659488 1.93418217 1.86772529 1.620171898 1.983980661 2.704326177 2.560053918 2.217375798 2.333132946 1.285020321 1 11.38135881 -8.377675376 4.152241691 1.020722108 2.153027622 0.633157398 0.310086215 0.161940281 4.40516237 0.34289861 0.090418643 4.19E-09 8.377675376 1.132305515 KS(ph)MSEDGGLQESNPCADDFVSASTADVSHTNLGTIR ddPTM_A459_MK2206_30min_R2 1 KSMSEDGGLQESNPCADDFVSASTADVSHTNLGTIR 36 1 A0A1W2PRP5;H7C0I1;B8ZZW5;Q8NBF6-2;Q8NBF6 A0A1W2PRP5 AVL9 Late secretory pathway protein AVL9 homolog 1 KS(0.499)MS(0.499)EDGGLQES(0.003)NPCADDFVSASTADVSHTNLGTIR 88.744 1.91E-09 5894900 10141 12404 13101 15261 14146 10769 15132 6860.4 13700 10778 TRUE FALSE 10917.40276 11788.0354 13537.7808 14014.12748 13590.55696 11178.82184 13145.15022 7757.077835 14891.60124 10426.31474 1.047100824 1.130604215 1.298424336 1.344111302 1.30348616 1.072173833 1.26076668 0.743990377 1.428270832 1 13.3479417 -7.173458102 1.966091468 1.076164126 1.224081065 0.077821944 0.186128487 0.803592047 6.090631164 0.088188364 0.059937508 6.71E-08 7.173458102 0.147916939 KS(ph)NY(ph)FMPFS(ph)AGK ddPTM_A459_MK2206_30min_R1 1 KSNYFMPFSAGK 12 1 P33261 P33261 CYP2C19 Cytochrome P450 2C19 3 KS(1)NY(1)FMPFS(1)AGK 62.077 0.043592 0 571.86 378.75 412.43 299.16 696.5 634.88 486.25 377.23 382.65 446.9 TRUE FALSE 523.220304 354.0933062 384.4354007 322.201355 668.7569301 670.8263569 453.8131497 373.9319179 422.4278368 502.2653459 1.041720892 0.704992509 0.765402996 0.641496288 1.331481329 1.335601515 0.903532671 0.744490777 0.841045157 1 8.972305929 -4.437941078 21.46616504 0.919789638 9.164689191 0.024889288 0.230962806 1979.813949 499339.0428 0.061865699 1616.662868 3.65E-05 4.437941078 8.244899553 KS(ph)PFLSSAEGAVPK ddPTM_A459_MK2206_30min_R2 1 KSPFLSSAEGAVPK 14 1 Q6UB99;A0A2R8Y438 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 KS(0.807)PFLS(0.143)S(0.05)AEGAVPK 69.024 0.031675 3858700 36462 37385 38745 40395 31118 26940 44593 36380 25826 40731 TRUE FALSE 39253.55875 35528.51526 40036.73896 37094.59928 29896.15096 27965.22058 38737.88553 41134.99091 28072.2988 39401.95081 0.996233891 0.901694321 1.016110577 0.941440678 0.75874799 0.709742031 0.983146386 1.043983612 0.712459617 1 15.26597944 -6.019557229 24.10056203 0.866422701 0.966780178 0.147984891 0.11418392 992.6722392 1223281.093 0.034752847 0.045599899 9.56E-07 6.019557229 0.100357477 KS(ph)PLAEEGR ddPTM_A459_MK2206_30min_R1 2 KSPLAEEGR 9 1 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 KS(1)PLAEEGR;KS(1)PLAEEGR 99.539 0.033612 21048000 8117.8 8944.9 8467.1 6706.2 7764 6513.7 8385.9 7200.3 4553.5 6344.2 TRUE FALSE 7427.338482 8362.585384 7892.376843 7222.712686 7454.743439 6882.500065 7826.491912 7137.348536 5026.85262 7130.167392 1.041677996 1.17284559 1.106899237 1.0129794 1.045521519 0.965264865 1.09765893 1.001007149 0.705011866 1 12.79972023 -8.043710103 8.836433772 0.851869863 1.061875505 0.492033328 0.084578753 0.325255148 62.06862719 0.054657705 0.020920361 9.04E-09 8.043710103 0.210005642 KS(ph)PLGGGGGSGASSQAACLK ddPTM_A459_MK2206_30min_R2 2 KSPLGGGGGSGASSQAACLK 20 1 J3QQY0;J3KSZ8;Q68DK7;Q68DK7-2 J3QQY0 MSL1 Male-specific lethal 1 homolog 1 KS(1)PLGGGGGSGASSQAACLK;KS(0.999)PLGGGGGS(0.001)GASSQAACLK 85.423 0.0012415 31478000 118581 126140 121617 142045 133880 125317 149054 113313 115743 146263 TRUE FALSE 127659.6525 119876.071 125671.6501 130439.4691 128623.1985 130086.0262 129483.0308 128123.3982 125810.1169 141490.4503 0.902249249 0.847237893 0.888198814 0.921895922 0.909059221 0.919397924 0.915136184 0.905526825 0.889177444 1 17.11034516 -14.52287875 0.191683129 1.422496983 0.882837267 0.681980949 0.020554277 86.22212988 0.842757535 13.97205094 0.059078187 3.00E-15 14.52287875 -0.539659716 KS(ph)PPPSFCLEYTSAIFEFK ddPTM_A459_MK2206_30min_R1 1 KSPPPSFCLEYTSAIFEFK 19 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 KS(0.647)PPPS(0.353)FCLEYTSAIFEFK 74.222 0.0051393 3491400 2791.4 3353.9 3597 2518.6 2507.8 2735.9 2894.2 3213.8 3379 2996.1 TRUE FALSE 2553.976772 3135.5605 3352.845662 2712.583008 2407.909016 2890.804294 2701.133199 3185.702085 3730.259142 3367.279487 0.758468901 0.931185104 0.995713505 0.80557109 0.715090335 0.858498472 0.802170776 0.946075934 1.107796117 1 11.71736776 -7.99848763 4.226121772 1.050356102 0.843185741 0.539805085 0.080047667 0.170453338 7.238041912 0.056558915 0.022697044 1.00E-08 7.99848763 -0.207170362 KS(ph)PRPAGPQLFLPDPDPQR ddPTM_A459_MK2206_30min_R2 2 KSPRPAGPQLFLPDPDPQR 19 2 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 1 KS(1)PRPAGPQLFLPDPDPQR;KS(1)PRPAGPQLFLPDPDPQR 75.564 0.0036062 64714000 170370 248150 222200 286490 284460 263380 270980 191144 271720 247770 TRUE FALSE 183413.6582 235827.2318 229608.0371 263082.8506 273290.6711 273403.1105 235400.0005 216127.1771 295353.7144 239685.2852 0.765227027 0.98390367 0.957956334 1.097617863 1.140206295 1.140675408 0.982121202 0.90171233 1.232256349 1 17.87078182 -4.191635027 1.061304198 1.064034208 0.106313702 0.481531803 0.092765331 4.826217105 1.850206194 0.029606354 7.060031011 6.43E-05 4.191635027 -0.957720506 KS(ph)PSDTEGLVK ddPTM_A459_MK2206_30min_R2 1 KSPSDTEGLVK 11 1 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 KS(0.849)PS(0.117)DT(0.035)EGLVK 69.878 0.034837 7934700 45730 37185 38819 34282 29412 33553 54284 34704 42609 44582 TRUE FALSE 49231.12396 35338.44697 40113.20609 31481.05094 28257.1371 34829.88293 47156.44559 39239.93196 46315.0538 43127.29299 1.141530584 0.819398681 0.930111846 0.729956572 0.655203124 0.807606518 1.093424658 0.909863088 1.073915161 1 15.39631354 -7.250446774 24.79592041 1.011789318 0.835731458 0.293653995 0.129734053 861.8969938 1944176.22 0.051856939 0.039752177 5.62E-08 7.250446774 -0.17605786 KS(ph)PSSDSWTCADTSTER ddPTM_A459_MK2206_30min_R2 4 KSPSSDSWTCADTSTER 17 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;H0YIQ0 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 KS(0.926)PS(0.055)S(0.019)DSWTCADTSTER;KS(0.989)PS(0.008)S(0.002)DS(0.001)WTCADTSTER;KS(0.895)PS(0.104)S(0.001)DSWTCADTSTER;KS(0.76)PS(0.118)S(0.118)DS(0.003)WTCADTSTER 96.773 0.0030074 67090800 53256.4 53980.1 51727.1 54830.4 56740.9 50708.5 58205.9 45501.4 45389.5 49330.5 TRUE FALSE 57333.75093 51299.52673 53451.6557 50350.58093 54512.96717 52638.2475 50563.39541 51448.58921 49337.39666 47720.84982 1.201440275 1.074991894 1.120090189 1.055106544 1.142330184 1.103045057 1.059566114 1.078115528 1.033875064 1 15.54233211 -1.522878747 0.056456477 0.843690694 1.5745428 0.573925433 0.035689276 295.640667 1.256558774 3.48124029 18.09627242 0.03 1.522878747 0.730852105 KS(ph)PTMEQAVQTASAHLPAPAAVGR ddPTM_A459_MK2206_30min_R2 1 KSPTMEQAVQTASAHLPAPAAVGR 24 1 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 KS(0.714)PT(0.286)MEQAVQTASAHLPAPAAVGR 63.522 0.0026713 27950000 24026 39897 30982 47300 42972 46973 54129 40104 38153 30079 TRUE FALSE 25865.44903 37915.773 32014.92442 43435.43869 41284.70336 48760.59043 47021.79728 45345.7305 41471.47898 29097.52469 0.888922659 1.303058366 1.100262815 1.492753736 1.418839018 1.675764208 1.616006783 1.558405087 1.42525797 1 14.82860881 -5.222319076 0.95641715 1.50124536 0.885388794 0.384641403 0.200106098 1.06773673 1.227243532 0.068980383 0.58920123 5.99E-06 5.222319076 -0.615856566 KS(ph)PVGKSPPSTGSTYGSSQK ddPTM_A459_MK2206_30min_R2 1 KSPVGKSPPSTGSTYGSSQK 20 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KS(0.636)PVGKS(0.363)PPS(0.001)TGSTYGSSQK 70.094 0.0044458 25783000 96117 120960 127840 132060 121450 107250 129190 92768 100100 119910 TRUE FALSE 103475.7914 114953.3023 132102.1218 121270.2756 116681.2628 111331.4739 112227.1978 104893.0961 108806.5171 115997.3465 0.89205309 0.990999413 1.138837445 1.045457325 1.005895965 0.95977604 0.967497975 0.904271514 0.938008673 1 16.82373228 -6.764467823 2.660855896 0.946123527 1.023953071 0.193698275 0.061113231 0.427787936 6.211169119 0.024580316 0.02274825 1.72E-07 6.764467823 0.077829544 KS(ph)PVGMLDLSSWSSPEVLR ddPTM_A459_MK2206_30min_R1 1 KSPVGMLDLSSWSSPEVLR 19 1 O95613-2;O95613 O95613-2 PCNT Pericentrin 1 KS(1)PVGMLDLSSWSSPEVLR 80.541 0.0032141 5450000 2078 2734 2453.7 2152.9 2269.5 2292 2660.9 1818.1 2246.8 2152.3 TRUE FALSE 1901.255188 2556.016103 2287.14968 2318.716731 2179.101009 2421.771059 2483.396216 1802.204543 2480.3629 2418.943173 0.785985884 1.056666453 0.945516086 0.95856602 0.900848368 1.001169059 1.026645125 0.745037983 1.025391141 1 11.24016116 -4.737034894 24.79988291 0.954915721 0.785985051 0.276965917 0.08468217 2862.67198 2908886.096 0.020425399 1.32144824 1.83E-05 4.737034894 -0.16893067 KS(ph)PVGMLDLSSWSSPEVLR ddPTM_A459_MK2206_30min_R2 2 KSPVGMLDLSSWSSPEVLR 19 1 O95613-2;O95613 O95613-2 PCNT Pericentrin 1 KS(1)PVGMLDLSSWSSPEVLR;KS(1)PVGMLDLSSWSSPEVLR 73.76 0.0054678 5251000 11897.3 15873.6 15551.7 15779.1 14424.1 17074.4 14366.7 11496.1 13779 16336.7 TRUE FALSE 12808.16644 15085.34011 16070.18592 14489.89706 13857.73736 17724.17826 12480.33503 12998.67974 14977.47251 15803.63482 0.810456998 0.954548766 1.016866443 0.916871164 0.876870259 1.121525425 0.789712948 0.822512029 0.947723273 1 13.94796879 -9.969173714 6.725951773 1.000007002 0.919710851 0.061868184 0.096069536 1.40E-10 0 0.093536843 0.022686017 1.07E-10 9.969173714 -0.08029615 KS(ph)REDLSAQPVQTK ddPTM_A459_MK2206_30min_R2 1 KSREDLSAQPVQTK 14 2 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 KS(1)REDLSAQPVQTK 87.419 0.024963 11995000 35736 39344 32959 40455 37252 35333 41269 39117 33436 32485 TRUE FALSE 38471.97564 37390.23417 34057.83661 37149.69709 35789.2993 36677.62207 35850.33073 44229.72621 36344.20284 31425.01711 1.224246768 1.189823829 1.083781004 1.18216951 1.13887923 1.167147243 1.140821359 1.407468644 1.156537249 1 14.93962591 KS(ph)SGTGTEPVAK ddPTM_A459_MK2206_30min_R2 1 KSSGTGTEPVAK 12 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9;A0A0U1RR74 Q6ULP2-7 AFTPH Aftiphilin 1 KS(0.473)S(0.473)GT(0.038)GT(0.016)EPVAK 62.165 0.045688 12142000 20271 20753 19415 21860 19495 13864 23970 17806 15229 19256 TRUE FALSE 21822.96335 19722.4362 20062.28641 20073.96807 18729.52835 14391.60423 20822.71021 20133.30534 16553.59089 18627.6783 1.171534262 1.058770496 1.077014864 1.077641977 1.005467673 0.772592483 1.117837117 1.080827413 0.888655614 1 14.18516025 -6.280264523 4.182667681 0.977141488 1.093605013 0.279266576 0.094204266 0.323421911 13.67858516 0.030461397 0.036654883 5.24E-07 6.280264523 0.116463525 KS(ph)SISSISGR ddPTM_A459_MK2206_30min_R2 1 KSSISSISGR 10 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KS(0.916)S(0.081)IS(0.001)S(0.002)ISGR 90.697 0.014925 100740000 170210 213180 197700 175090 161450 177300 208510 145250 132450 172770 TRUE FALSE 183241.4085 202593.7912 204291.2193 160784.5869 155110.6618 184047.2757 181132.3865 164234.6737 143970.2616 167132.529 1.096383867 1.212174508 1.222330689 0.962018512 0.928069854 1.101205593 1.083765007 0.982661333 0.861413768 1 17.35063303 -5.763300392 24.99967427 0.99387932 1.180484189 0.586321215 0.072445214 36.34892338 488300.0213 0.02155418 0.033898804 1.72E-06 5.763300392 0.186604869 KS(ph)SLLSEEQQETSTLVETIR ddPTM_A459_MK2206_30min_R1 2 KSSLLSEEQQETSTLVETIR 20 1 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;X6R5W5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 KS(0.5)S(0.5)LLSEEQQETSTLVETIR;KS(0.5)S(0.5)LLSEEQQETSTLVETIR 201.18 4.51E-16 10360300 2745 2058.1 2160.9 1889.54 2016.01 1597.36 1724.24 1852.96 1763.41 1605.5 TRUE FALSE 2511.523335 1924.117316 2014.224129 2035.072698 1935.708053 1687.801143 1609.219096 1836.759766 1946.72278 1804.401461 1.391887221 1.066346574 1.116283805 1.127838091 1.072770165 0.935380058 0.891829856 1.017932985 1.078874531 1 10.81730464 -1.522878745 0.611532029 0.998843661 24.95482899 0.699621825 0.070757347 111.9157038 0.832419558 0.034233892 3594.396343 0.03 1.522878745 23.95598533 KS(ph)SLVTSK ddPTM_A459_MK2206_30min_R2 1 KSSLVTSK 8 1 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7 A6NMQ3 ENSA Alpha-endosulfine 1 KS(0.928)S(0.051)LVT(0.016)S(0.005)K 96.756 0.037389 29115000 47156 26301 44714 36433 34006 23770 35156 74936 104470 45939 TRUE FALSE 50766.29962 24994.93059 46204.74244 33456.30736 32670.75357 24674.58401 30539.97497 84730.39249 113556.6118 44440.01419 1.142355612 0.562442003 1.039710344 0.752841959 0.735165237 0.555233486 0.687217939 1.906623885 2.555278477 1 15.43957166 -7.764505451 24.99278163 1.923213792 0.771934278 0.588543691 0.395064602 47.57365247 387777.6988 0.192444738 0.098670126 1.72E-08 7.764505451 -1.151279514 KS(ph)SPEMEDAR ddPTM_A459_MK2206_30min_R1 1 KSSPEMEDAR 10 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 KS(0.742)S(0.258)PEMEDAR 166.45 0.00058532 6755800 2332.6 2826.5 3108.5 2588.5 2344.4 1981.5 2801.5 2504.7 1445.6 1723.6 TRUE FALSE 2134.200121 2642.494336 2897.503681 2787.866719 2251.017584 2093.690818 2614.617047 2482.801672 1595.875293 1937.132581 1.101731571 1.364126732 1.495769422 1.43917187 1.162035891 1.080819578 1.349735724 1.281689078 0.823833799 1 10.91970698 -8.252076931 24.29544034 0.911916904 1.290563315 0.545253224 0.135967713 315.6940003 819229.5949 0.101957803 0.037306187 5.60E-09 8.252076931 0.378646411 KS(ph)SPPASSPQPEAPTSSWR ddPTM_A459_MK2206_30min_R2 1 KSSPPASSPQPEAPTSSWR 19 1 P43250-2 P43250-2 1 KS(0.5)S(0.5)PPASSPQPEAPTSSWR 73.928 0.0053296 14930000 10029 14006 11754 11010 12818 9415.7 14014 10857 7662.7 11043 TRUE FALSE 10796.82795 13310.48241 12145.87249 10110.44778 12314.70091 9774.021061 12173.94497 12276.04718 8329.187795 10682.66781 1.010686482 1.245988609 1.136969969 0.946434726 1.152773926 0.914941963 1.139597821 1.149155566 0.779691734 1 13.38298436 -6.846574623 0.379999921 0.963030943 1.144529772 0.13696567 0.124783096 3.304944333 1.01302858 0.136409335 0.227955632 1.42E-07 6.846574623 0.18149883 KS(ph)SPSTGSLDSGNESK ddPTM_A459_MK2206_30min_R1 1 KSSPSTGSLDSGNESK 16 1 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 "Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2" 1 KS(0.497)S(0.497)PS(0.005)T(0.001)GSLDSGNESK 64.565 0.029784 5618200 1055.7 1422.2 1312 1280.8 1200.3 1053.1 1300.6 1321.9 1005.5 1174.5 TRUE FALSE 965.9071713 1329.614522 1222.945095 1379.447438 1152.489509 1112.725612 1213.839347 1310.342768 1110.025323 1320.005927 0.731744571 1.007279206 0.926469397 1.045031245 0.873094193 0.842970163 0.919571134 0.992679458 0.840924499 1 10.36632869 -11.27088527 2.580496052 1.018747296 0.916070188 0.082678403 0.088177536 64056682.69 49198404.54 7680620.687 0.021070709 5.36E-12 11.27088527 -0.102677107 KS(ph)SPSTGSLDSGNESK ddPTM_A459_MK2206_30min_R2 1 KSSPSTGSLDSGNESK 16 1 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 "Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2" 1 KS(0.485)S(0.485)PS(0.028)T(0.002)GSLDSGNESK 87.99 0.0073387 8489100 16757 22301 22094 20400 21338 13160 22748 19881 17430 20615 TRUE FALSE 18039.9288 21193.56477 22830.60293 18733.25474 20500.16291 13660.81302 19761.16027 22479.51496 18946.02989 19942.33424 0.904604676 1.062742431 1.144831024 0.939371215 1.027972085 0.685015749 0.990915107 1.127225865 0.950040736 1 14.28354667 KS(ph)SSLESLQTAVAEVTLNGDIPFHRPR ddPTM_A459_MK2206_30min_R1 2 KSSSLESLQTAVAEVTLNGDIPFHRPR 27 2 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 KS(0.36)S(0.36)S(0.264)LES(0.014)LQT(0.002)AVAEVTLNGDIPFHRPR;KS(0.381)S(0.381)S(0.224)LES(0.014)LQTAVAEVTLNGDIPFHRPR 118.76 3.31E-12 6413000 1333.56 1271.26 1366.22 974.89 1218.41 1130.37 1578.81 1351.97 1171.4 1536.61 TRUE FALSE 1220.133719 1188.500743 1273.484793 1049.976197 1169.87815 1194.370573 1473.490466 1340.149869 1293.171222 1726.976848 0.706514231 0.688197265 0.737406986 0.607985103 0.677413916 0.691596169 0.853219583 0.776009169 0.748806345 1 10.75403303 -9.325963256 0.342191411 1.054569031 0.670369646 0.744810511 0.052627403 2.122160576 0.402592096 0.23630447 0.054499425 4.72E-10 9.325963256 -0.384199385 KS(ph)STSDWPTDNQDGWDGKQENEER ddPTM_A459_MK2206_30min_R2 1 KSSTSDWPTDNQDGWDGKQENEER 24 2 A0A3F2YNX6;Q92794;A0A3B3IS53;A0A3B3ISZ3;A5PLL3 A0A3F2YNX6 KAT6A;MYST3 Histone acetyltransferase KAT6A;Histone acetyltransferase 1 KS(0.434)S(0.434)T(0.083)S(0.048)DWPTDNQDGWDGKQENEER 107.18 2.10E-07 8322800 23914 34643 29359 30504 31098 23217 39263 28324 31016 33843 TRUE FALSE 25744.87423 32922.679 30337.81441 28011.72562 29876.93627 24100.5392 34107.72094 32026.04405 33713.71562 32738.70568 0.786374223 1.005619444 0.926665052 0.855614938 0.912587582 0.736148198 1.041816414 0.978231832 1.029781566 1 14.99870967 -7.307562447 24.99998853 1.010643484 0.880432352 0.480544144 0.071851119 415.7323126 225336.8773 0.029887837 0.02015044 4.93E-08 7.307562447 -0.130211133 KS(ph)STVATLQGTPDHGDPR ddPTM_A459_MK2206_30min_R1 2 KSSTVATLQGTPDHGDPR 18 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 KS(0.752)S(0.16)T(0.066)VATLQGT(0.022)PDHGDPR;KS(0.437)S(0.437)T(0.125)VAT(0.002)LQGTPDHGDPR 118.08 0.00051595 14440000 7086.8 6002.9 6414.8 5335.4 5531.7 4647.7 5288.7 4828.6 3960.6 3811.17 TRUE FALSE 6484.030446 5612.110119 5979.381249 5746.333432 5311.360675 4910.848758 4935.900473 4786.384059 4372.318543 4283.326512 1.513783838 1.310222348 1.395966717 1.34155858 1.240008358 1.146503481 1.15235214 1.117445529 1.020776383 1 12.06451594 -6.447384124 0.400269286 0.988489433 1.519700031 0.914294329 0.046198461 0.464107477 0.139613162 0.046333326 0.102537719 3.57E-07 6.447384124 0.531210598 KS(ph)STVATLQGTPDHGDPR ddPTM_A459_MK2206_30min_R2 3 KSSTVATLQGTPDHGDPR 18 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 KS(0.418)S(0.418)T(0.162)VAT(0.003)LQGTPDHGDPR;KS(0.436)S(0.436)T(0.128)VATLQGTPDHGDPR;KS(0.44)S(0.44)T(0.121)VATLQGTPDHGDPR 145.88 0.00013272 56235000 113357 120386 121849 113141 103922 75620 74975 61132 94794 61303 TRUE FALSE 122035.6991 114407.8063 125911.3848 103897.0184 99841.50011 78497.77209 65130.69244 69122.1623 103039.0108 59302.68813 2.057844306 1.92921788 2.123198607 1.751978227 1.683591474 1.323679829 1.09827555 1.165582278 1.737509951 1 15.85580988 -6.444485517 1.485198869 1.253304084 2.016829908 0.742008196 0.197757829 0.202931215 0.907724889 0.078023273 0.092060827 3.59E-07 6.444485517 0.763525825 KS(ph)SVNGSSATSSG ddPTM_A459_MK2206_30min_R1 2 KSSVNGSSATSSG 13 1 R4GMX3;P35226 R4GMX3 COMMD3-BMI1;BMI1 Polycomb complex protein BMI-1 1 KS(0.446)S(0.446)VNGS(0.068)S(0.039)AT(0.001)SSG;KS(0.415)S(0.415)VNGS(0.085)S(0.085)ATSSG 103.11 0.015723 12461000 10410.4 7097.1 4695.2 4532.5 2584.9 2645.1 7031.2 7763.2 515.95 3398.8 TRUE FALSE 9524.940813 6635.0775 4376.502906 4881.593935 2481.937959 2794.863276 6562.161477 7695.327161 569.5848488 3819.869004 2.493525512 1.736990848 1.145720678 1.277947995 0.64974426 0.731664692 1.717902229 2.014552633 0.149111095 1 11.89930745 -4.850395285 1.726389796 1.112589691 2.856553241 0.440157473 0.501070138 0.798316675 2.685322257 0.142784597 2.225956557 1.41E-05 4.850395285 1.74396355 KS(ph)TAALEEDAQILK ddPTM_A459_MK2206_30min_R1 2 KSTAALEEDAQILK 14 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q15052-2;Q15052 B1ALK7 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 KS(0.753)T(0.247)AALEEDAQILK;KS(0.757)T(0.243)AALEEDAQILK 134.83 0.00031461 12326300 7544.6 10450.4 9731.2 9333.1 8760 8679.6 8009.4 8161.6 6954.9 6277.7 TRUE FALSE 6902.892152 9770.077061 9070.673257 10051.93698 8411.07065 9171.031451 7475.10754 8090.243992 7677.886743 7055.42887 0.978380234 1.384760195 1.285630317 1.424709563 1.192141655 1.299854569 1.059483084 1.146669344 1.08822396 1 12.78451807 -7.261726085 24.99624952 1.085816536 1.271985064 0.369614515 0.118891322 28.68143179 2500392.253 0.046295691 0.03341697 5.47E-08 7.261726085 0.186168528 KS(ph)TAALEEDAQILK ddPTM_A459_MK2206_30min_R2 2 KSTAALEEDAQILK 14 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q15052-2;Q15052 B1ALK7 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 KS(0.985)T(0.015)AALEEDAQILK;KS(0.982)T(0.018)AALEEDAQILK 144.5 0.00095049 9462700 29907.8 37622 33896 32592 33446 25882.2 37384 30087 28857 28959 TRUE FALSE 32197.56416 35753.74619 35026.07572 29929.12934 32132.74199 26867.16526 32475.43589 34019.4742 31366.9297 28014.0702 1.149335456 1.276278168 1.25030299 1.068360618 1.147021542 0.959059682 1.159254462 1.214370991 1.11968484 1 14.77386399 -5.75726032 24.99960542 1.103456791 1.230402825 0.370019993 0.07709387 119.6041153 715472.0363 0.021606279 0.035791921 1.75E-06 5.75726032 0.126946034 KS(ph)VSNGALR ddPTM_A459_MK2206_30min_R1 1 KSVSNGALR 9 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 KS(0.955)VS(0.045)NGALR 103.08 0.027934 18552000 3108.2 3360.7 3300.6 3510.9 3298.9 3010 3293.8 3483.1 954.02 2248.2 TRUE FALSE 2843.831268 3141.917819 3076.564468 3781.310126 3167.497827 3180.423599 3074.076612 3452.647624 1053.193793 2526.723989 1.125501353 1.243474884 1.217610028 1.496526784 1.253598668 1.258714293 1.216625411 1.366452228 0.41682186 1 11.30305236 -8.24865666 24.99987377 0.708410916 1.274068715 0.663324422 0.160692603 361.4012777 706816.056 0.102670198 0.038242548 5.64E-09 8.24865666 0.5656578 KSAEPSANTTLVS(ph)ETEEEGSVPAFGAAAK ddPTM_A459_MK2206_30min_R1 4 KSAEPSANTTLVSETEEEGSVPAFGAAAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 KSAEPSANTTLVS(0.967)ET(0.033)EEEGSVPAFGAAAK;KSAEPSANTTLVS(0.839)ET(0.129)EEEGS(0.031)VPAFGAAAK;KSAEPSANTTLVS(0.926)ET(0.074)EEEGSVPAFGAAAK;KSAEPSANTTLVS(0.969)ET(0.031)EEEGSVPAFGAAAK 151.04 4.63E-16 221135000 16550.3 16730.6 18125.3 12636 14381 16262.8 19318.9 14584.5 17984.8 17121.6 TRUE FALSE 15142.61008 15641.4349 16895.00514 13609.22691 13808.17432 17183.58568 18030.17143 14456.98925 19854.38432 19242.75307 0.786925344 0.812848081 0.877993137 0.707239076 0.717577899 0.89298998 0.936985023 0.751295264 1.031785018 1 14.2320276 -6.874044015 7.054645111 0.909869112 0.783977429 0.419652083 0.083011335 0.257475433 14.9887678 0.02921543 0.025781808 1.34E-07 6.874044015 -0.125891683 KSAEPSANTTLVS(ph)ETEEEGSVPAFGAAAK ddPTM_A459_MK2206_30min_R2 5 KSAEPSANTTLVSETEEEGSVPAFGAAAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 KSAEPSANTTLVS(0.912)ET(0.084)EEEGS(0.004)VPAFGAAAK;KSAEPSANTTLVS(0.783)ET(0.215)EEEGS(0.002)VPAFGAAAK;KSAEPSANTTLVS(0.967)ET(0.032)EEEGS(0.001)VPAFGAAAK;KSAEPSANTTLVS(0.414)ET(0.414)EEEGS(0.172)VPAFGAAAK;KSAEPSANTTLVS(0.941)ET(0.059)EEEGSVPAFGAAAK 148.26 2.58E-17 36271000 517283.1 573603.6 544607 588629 529723 457659.3 578543.6 507537.6 402188.6 603056 TRUE FALSE 556886.6919 545119.2793 562763.9256 540536.1278 508923.4134 475075.8454 502580.1304 573874.507 437170.2374 583378.3321 0.954589263 0.934418111 0.964663743 0.926561886 0.872372842 0.814352915 0.861499481 0.983708985 0.749376885 1 19.15407228 -6.130989673 3.692754532 0.875262303 0.949105566 0.178213607 0.069008031 0.398927519 9.728797815 0.020032779 0.026735468 7.40E-07 6.130989673 0.073843264 KSAEPSANTTLVSET(ph)EEEGSVPAFGAAAK ddPTM_A459_MK2206_30min_R2 2 KSAEPSANTTLVSETEEEGSVPAFGAAAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 KSAEPSANTTLVS(0.05)ET(0.934)EEEGS(0.016)VPAFGAAAK;KSAEPSANTTLVS(0.212)ET(0.765)EEEGS(0.022)VPAFGAAAK 129.22 1.37E-13 18113200 129708 152936 142925 159416 153689 122666 161112 131990 124697 160399 TRUE FALSE 139638.5442 145341.4206 147690.0482 146391.2029 147654.3976 127334.1406 139957.8009 149241.5462 135542.9197 155165.1938 0.899934714 0.936688294 0.951824598 0.943453872 0.951594839 0.820635978 0.901992241 0.961823606 0.873539461 1 17.24344545 -10.99360244 2.919728255 1.002349073 0.917425771 0.270049163 0.04148359 14628491.2 16083753.26 277303.8531 0.010534219 1.01E-11 10.99360244 -0.084923301 KSAEPSANTTLVSETEEEGS(ph)VPAFGAAAK ddPTM_A459_MK2206_30min_R2 1 KSAEPSANTTLVSETEEEGSVPAFGAAAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 KSAEPSANTTLVS(0.363)ET(0.169)EEEGS(0.469)VPAFGAAAK 126.27 6.30E-14 19674000 35816 38150 36727 40948 39697 30816 39122 33858 27772 43505 TRUE FALSE 38558.1005 36255.52648 37951.45985 37602.41741 38138.29632 31988.72447 33985.23441 38283.35685 30187.55836 42085.43541 0.916186327 0.86147443 0.901771824 0.89347816 0.906211281 0.760090139 0.80752959 0.909658091 0.71729229 1 15.36103342 -6.700832612 24.99996393 0.831304368 0.894116289 0.124121383 0.074155861 135.4724028 55880.65444 0.022861858 0.022861848 1.99E-07 6.700832612 0.06281192 KSASPEVS(ph)EGHENQHGQESEAK ddPTM_A459_MK2206_30min_R2 1 KSASPEVSEGHENQHGQESEAK 22 1 O60930 O60930 RNASEH1 Ribonuclease H1 1 KS(0.139)AS(0.139)PEVS(0.722)EGHENQHGQESEAK 62.617 0.0050479 10177000 20699 31129 28849 36828 44607 32139 41592 36036 28873 38097 TRUE FALSE 22283.73135 29583.17913 29810.81126 33819.03459 42855.50505 33362.07217 36130.92044 40746.02893 31384.32135 36853.89801 0.604650595 0.802715065 0.808891674 0.917651495 1.162848636 0.905252198 0.980382602 1.105609749 0.851587567 1 15.1695296 -5.184999343 1.041470526 1.001486956 0.569908027 0.641195637 0.091543013 0.653398302 0.893130022 0.030810656 0.270333985 6.53E-06 5.184999343 -0.431578929 KSDAS(ph)DMNSDTSPSCR ddPTM_A459_MK2206_30min_R2 1 KSDASDMNSDTSPSCR 16 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KS(0.248)DAS(0.647)DMNS(0.002)DT(0.096)S(0.006)PS(0.001)CR 92.8 0.018867 3698600 6891.5 8238.7 9326.7 8628.5 8754.5 6848.5 8254.5 6479.8 6527.2 8549.7 TRUE FALSE 7419.118539 7829.578138 9637.647523 7923.523949 8410.754342 7109.124466 7170.674235 7326.732108 7094.924058 8270.723989 0.897033748 0.946661761 1.165272537 0.958020599 1.016930846 0.859552861 0.866994745 0.885863453 0.857835912 1 13.01379791 -6.758452081 24.99961791 0.885224937 1.001206311 0.309530901 0.076008099 90.29681999 755662.1176 0.025884819 0.024822345 1.74E-07 6.758452081 0.115981373 KSDASDMNSDT(ph)SPSCR ddPTM_A459_MK2206_30min_R1 1 KSDASDMNSDTSPSCR 16 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KSDASDMNS(0.086)DT(0.515)S(0.377)PS(0.021)CR 115.88 0.0024525 24432000 2332.6 2113.7 2402.6 2240.7 2445.5 2209.3 2454.4 1970.2 1420.5 1378.4 TRUE FALSE 2134.200121 1976.097746 2239.518206 2413.279102 2348.090557 2334.388657 2290.671454 1952.974749 1568.166058 1549.166598 1.377644033 1.275587627 1.445627738 1.557791851 1.515712099 1.506867408 1.478647588 1.26066154 1.01226431 1 10.59727659 -8.075677115 2.523875869 0.996898441 1.452897144 0.84525485 0.075801287 0.125075231 1.453177355 0.073570254 0.023971547 8.40E-09 8.075677115 0.455998703 KSDASDMNSDT(ph)SPSCR ddPTM_A459_MK2206_30min_R2 2 KSDASDMNSDTSPSCR 16 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KSDASDMNS(0.05)DT(0.793)S(0.147)PS(0.01)CR;KSDASDMNS(0.024)DT(0.665)S(0.118)PS(0.193)CR 124.2 0.0016298 36595000 42869 65730 54723 72246 70847 65379 73711 62274 63050 61908 TRUE FALSE 46151.0836 62465.94378 56547.43751 66343.2707 68065.1908 67867.04366 64032.65716 70413.42562 68533.97503 59887.94703 0.770623905 1.043047005 0.944220671 1.107790031 1.136542396 1.133233764 1.069207751 1.17575287 1.144370085 1 15.86997806 -3.97612991 0.746741781 1.118269027 6.52E-11 0.691616926 0.064420458 4.357796782 0.769153385 0.023755922 5.40598128 0.00010565 3.97612991 -1.118269027 KSDASDMNSDTS(ph)PSCR ddPTM_A459_MK2206_30min_R1 3 KSDASDMNSDTSPSCR 16 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KSDASDMNS(0.061)DT(0.209)S(0.721)PS(0.009)CR;KSDASDMNS(0.008)DT(0.046)S(0.786)PS(0.16)CR;KSDASDMNS(0.032)DT(0.295)S(0.656)PS(0.018)CR 146.18 0.00018167 77495000 15170.9 15908.3 15291.2 14965.4 15810.9 14350.5 15016.6 16859.1 12432.7 9893.1 TRUE FALSE 13880.53529 14872.66678 14253.27595 16118.0377 15181.11837 15163.01291 14014.87001 16711.70267 13725.12366 11118.73192 1.248391938 1.337622571 1.281915605 1.449629132 1.365364188 1.363735813 1.260473777 1.503022358 1.234414478 1 13.44070464 -8.536070042 23.04214653 0.999999995 1.350832635 0.669309332 0.07542082 414.013751 723186.7374 0.069852232 0.018035769 2.91E-09 8.536070042 0.35083264 KSDASDMNSDTS(ph)PSCR ddPTM_A459_MK2206_30min_R2 2 KSDASDMNSDTSPSCR 16 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KSDASDMNS(0.189)DT(0.117)S(0.667)PS(0.026)CR;KSDASDMNS(0.004)DT(0.212)S(0.783)PSCR 155.26 0.00016597 28314800 35255 52390 48415 56394 55596 53578 52201 45912 49974 50575 TRUE FALSE 37954.14991 49788.38878 50029.13194 51786.4298 53413.02169 55616.94833 45346.946 51912.85604 54320.64819 48924.74189 0.775765971 1.017652559 1.022573242 1.05849163 1.091738446 1.136785728 0.926871441 1.061075726 1.110289929 1 15.57827662 -4.535226489 1.923021205 1.054449383 0.508238943 0.67762271 0.056448452 1.101856384 2.406630965 0.015333284 1.347058227 2.92E-05 4.535226489 -0.54621044 KSDGACDSPS(ph)SDKENSSQIAQDHQK ddPTM_A459_MK2206_30min_R2 2 KSDGACDSPSSDKENSSQIAQDHQK 25 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KSDGACDS(0.017)PS(0.312)S(0.312)DKENS(0.16)S(0.199)QIAQDHQK;KS(0.002)DGACDS(0.009)PS(0.247)S(0.247)DKENS(0.247)S(0.247)QIAQDHQK 63.165 0.0013891 23445000 95199 92147 80646 89010 85468 62729 137807 102686 62459 97577 TRUE FALSE 102487.5086 87571.11397 83334.69739 81737.59827 82112.09688 65116.19605 119712.7754 116107.4128 67891.57092 94393.07048 1.085752462 0.927728206 0.882847618 0.865927953 0.86989539 0.689840851 1.268236903 1.230041699 0.719243167 1 16.52639333 -7.261886018 24.99999977 1.073550573 0.886926214 0.193501963 0.165566493 64.23742547 3595457.517 0.066934992 0.048220488 5.47E-08 7.261886018 -0.186624359 KSDIDEIVLVGGSTR ddPTM_A459_MK2206_30min_R1 1 KSDIDEIVLVGGSTR 15 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 91.14 0.02008 9676200 2954.9 3255.3 3002.6 3187.7 3120.7 2906.7 2920.3 3412 2625 2970.7 FALSE TRUE 2703.570238 3043.379378 2798.791878 3433.217206 2996.395911 3071.274842 2725.492115 3382.169244 2897.878144 3338.732744 0.809759404 0.911537284 0.838279699 1.028299499 0.897465039 0.91989239 0.816325332 1.013009876 0.867957505 1 11.7050849 -6.854732534 0.014894328 1.820484928 1.44E-13 0.180999164 0.069334623 1944.581713 12.17440719 715.5307884 770.8716696 1.40E-07 6.854732534 -1.820484928 KSDVEAIFSK ddPTM_A459_MK2206_30min_R2 1 KSDVEAIFSK 10 1 B4DY08;G3V4W0;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V4M8;G3V2H6;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V576;G3V555;G3V575;A0A0G2JNQ3;B2RXH8;O60812;A0A0G2JPF8;P0DMR1;B7ZW38 B4DY08;G3V2Q1;A0A0G2JNQ3;O60812 HNRNPC;HNRNPCL2;HNRNPCL1;HNRNPCL4;HNRNPCL3 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 3 0 113.77 0.010049 6396100 59002 74680 72302 71998 78159 63709 66564 47428 66381 63715 FALSE TRUE 63519.23848 70971.49979 74712.51259 66115.53309 75090.08494 66133.49064 57824.06684 53627.00244 72154.69939 61635.98477 1.030554452 1.151462089 1.21215736 1.072677484 1.218283203 1.072968833 0.938154344 0.87005996 1.170658661 1 15.91148526 -7.026365133 5.921661677 0.98589298 1.139384288 0.36370655 0.088344412 0.184533577 21.15020846 0.032540513 0.026129821 9.41E-08 7.026365133 0.153491308 KSEAGHASS(ph)PDSEVTSLCQK ddPTM_A459_MK2206_30min_R2 1 KSEAGHASSPDSEVTSLCQK 20 1 Q6NZY4;Q6NZY4-2 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 KS(0.031)EAGHAS(0.421)S(0.53)PDS(0.018)EVT(0.001)SLCQK 54.058 0.025048 7807800 7827.1 15000 12166 16726 21266 32810 19521 14884 19639 13010 TRUE FALSE 8426.348794 14255.12181 12571.60837 15359.4323 20430.98999 34058.60754 16957.86925 16829.3899 21347.16472 12585.48477 0.66952914 1.132663706 0.998897428 1.220408477 1.623377277 2.706181619 1.347414865 1.337206331 1.696173419 1 13.61947317 -6.083151802 2.874223412 1.674445125 0.959791204 0.33658061 0.431106456 0.315806646 5.088346142 0.138018678 0.19386395 8.26E-07 6.083151802 -0.714653921 KSEAPAEVTHFS(ph)PK ddPTM_A459_MK2206_30min_R1 1 KSEAPAEVTHFSPK 14 1 Q6PID6 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 1 KSEAPAEVT(0.006)HFS(0.994)PK 90.755 0.009161 26867000 5087.4 6068.2 6614.3 5338.5 4783.2 3981.9 4923.2 4741.1 5188.7 4748 TRUE FALSE 4654.689915 5673.159077 6165.339744 5749.672195 4592.675015 4207.351737 4594.782311 4699.649063 5728.083933 5336.218086 0.872282549 1.063142283 1.155376269 1.077480737 0.860661042 0.788451984 0.861055946 0.880707832 1.073435126 1 12.38160191 -6.259265867 24.91903439 0.896157576 1.051668867 0.283967102 0.100137141 222.8253566 2554661.966 0.031401655 0.038542216 5.50E-07 6.259265867 0.155511291 KSEAPAEVTHFS(ph)PK ddPTM_A459_MK2206_30min_R2 2 KSEAPAEVTHFSPK 14 1 Q6PID6 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 1 KSEAPAEVTHFS(1)PK;KSEAPAEVT(0.013)HFS(0.987)PK 67.645 0.041581 19295300 207739 204438 191875 190615 185230 142998 216020 184165 162390 233338 TRUE FALSE 223643.6576 194285.9062 198272.0167 175041.1448 177956.9395 148439.8891 187656.3145 208235.9978 176514.3887 225724.2002 0.990782811 0.860722537 0.878381745 0.77546468 0.788382191 0.657616193 0.831352218 0.922524026 0.781991424 1 17.78420157 -4.457398919 1.246640487 0.814772979 1.197501525 0.225559287 0.08792325 4.135643919 3.274168303 0.026230968 2.471061268 3.49E-05 4.457398919 0.382728547 KSEATPSPGACLQPEVPLS(ph)PAEQATTVK ddPTM_A459_MK2206_30min_R2 1 KSEATPSPGACLQPEVPLSPAEQATTVK 28 1 A0A2R8Y8D9;Q2NL68 A0A2R8Y8D9 PROSER3 Proline and serine-rich protein 3 1 KSEATPSPGACLQPEVPLS(0.812)PAEQAT(0.083)T(0.105)VK 85.595 1.65E-05 4068400 13704 15435 12824 15121 13767 12213 11279 8509.7 10262 12494 TRUE FALSE 14753.18878 14668.52034 13251.54576 13885.56593 13226.43841 12677.77427 9798.053751 9621.947008 11154.57021 12086.3218 1.22065166 1.21364635 1.096408484 1.148866144 1.094331147 1.048935688 0.810672917 0.796102169 0.92290859 1 13.56108764 -6.978708191 2.240199703 0.866059783 1.159435665 0.780285049 0.067604836 0.13598774 1.375037522 0.029033724 0.023191465 1.05E-07 6.978708191 0.293375883 KSECFSS(ph)PK ddPTM_A459_MK2206_30min_R1 1 KSECFSSPK 9 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 KSECFS(0.109)S(0.891)PK 99.539 0.033612 7733600 4208.2 5295.9 5374.1 4963.6 3497.7 2688.3 3817.4 3905.5 2219 3966.5 TRUE FALSE 3850.270492 4951.135947 5009.321065 5345.897332 3358.379202 2840.509223 3562.748211 3871.354625 2449.672991 4457.899966 0.863696028 1.110643125 1.123695261 1.199196342 0.753354546 0.637185501 0.799198779 0.868425639 0.549512777 1 12.12214853 -6.274922824 24.06673472 0.756392047 1.080430755 0.535443246 0.139503071 347.6666977 620552.338 0.042129308 0.048061229 5.31E-07 6.274922824 0.324038708 KSEDGTPAEDGT(ph)PAATGGSQPPSMGR ddPTM_A459_MK2206_30min_R1 1 KSEDGTPAEDGTPAATGGSQPPSMGR 26 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 KSEDGTPAEDGT(0.999)PAAT(0.001)GGSQPPSMGR 116.19 5.17E-07 0 602.68 674.32 528.05 582.11 740.32 486.51 633.42 541.61 679.69 346.54 TRUE FALSE 551.4189012 630.4216454 492.2074372 626.9442131 710.8314867 514.0557758 591.1657075 536.8747609 750.3462078 389.4719914 1.41581144 1.618657206 1.263781345 1.609728624 1.825115804 1.319878674 1.517864495 1.378468215 1.926572961 1 8.605375772 -10.64150271 4.720028615 0.999973092 1.534150902 0.391928352 0.20224436 7.57E-05 1.41E-05 0.188463279 0.045705906 2.28E-11 10.64150271 0.53417781 KSFSKEELMS(ph)SDLEETAGSTSIPK ddPTM_A459_MK2206_30min_R1 2 KSFSKEELMSSDLEETAGSTSIPK 24 2 O00567 O00567 NOP56 Nucleolar protein 56 1 KS(0.005)FS(0.004)KEELMS(0.499)S(0.412)DLEET(0.07)AGS(0.004)T(0.004)S(0.004)IPK;KS(0.002)FS(0.001)KEELMS(0.498)S(0.498)DLEET(0.001)AGSTSIPK 68.401 0.00079203 45182000 16872.8 17965.2 19880.8 21219.7 19653.5 17858.2 12902.6 20351.1 9879.6 4342.1 TRUE FALSE 15437.67976 16795.66221 18531.34669 22854.04497 18870.65948 18869.31585 12041.8911 20173.17248 10906.61977 4880.032129 3.163438139 3.441711401 3.797382107 4.683175103 3.866912958 3.866637627 2.467584388 4.133819603 2.234948354 1 12.25267493 -8.679463585 0.928358456 0.972418973 3.765567721 0.672823432 0.590080195 0.46818448 0.840326426 0.576506104 0.194340243 2.09E-09 8.679463585 2.793148748 KSLPAPVAQRPDS(ph)PGGGLQAPGQK ddPTM_A459_MK2206_30min_R1 1 KSLPAPVAQRPDSPGGGLQAPGQK 24 2 Q5JVS0-2;Q5JVS0 Q5JVS0-2 HABP4 Intracellular hyaluronan-binding protein 4 1 KSLPAPVAQRPDS(1)PGGGLQAPGQK 73.796 0.00062794 30108000 5353 5871.4 5479.6 4895.5 5397.3 5311.6 5051.8 5362.5 4253.2 3526 TRUE FALSE 4897.69924 5489.170793 5107.660019 5272.552258 5182.314112 5612.338202 4714.80364 5315.616228 4695.33536 3962.8275 1.235910279 1.385165212 1.288892847 1.330502591 1.30773144 1.416245901 1.189757475 1.341369572 1.18484475 1 11.95231445 -8.737686021 1.131777501 0.99884523 1.319477627 0.695919557 0.063570595 0.420243427 1.044463992 0.056349074 0.017636177 1.83E-09 8.737686021 0.320632396 KSLPAPVAQRPDS(ph)PGGGLQAPGQK ddPTM_A459_MK2206_30min_R2 1 KSLPAPVAQRPDSPGGGLQAPGQK 24 2 Q5JVS0-2;Q5JVS0 Q5JVS0-2 HABP4 Intracellular hyaluronan-binding protein 4 1 KS(0.001)LPAPVAQRPDS(0.999)PGGGLQAPGQK 49.94 0.016453 92326000 270660 358370 302550 333500 400000 329830 371210 302780 315490 320680 TRUE FALSE 291381.9377 340573.8669 312636.866 306251.9832 384293.9902 342381.9118 322469.6811 342354.3856 342930.7499 310216.2379 0.939286543 1.097859575 1.007803035 0.987220996 1.238793923 1.103687912 1.039499684 1.10359918 1.105457123 1 18.24291468 -3.367771505 0.76398209 1.088976554 2.03E-13 0.218442527 0.071731838 31.4624591 2.542687809 0.027168243 47.39600754 0.000428774 3.367771505 -1.088976554 KSLS(ph)DSESDDSK ddPTM_A459_MK2206_30min_R1 4 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KSLS(0.998)DS(0.002)ESDDSK;KS(0.008)LS(0.985)DS(0.002)ES(0.005)DDSK;KS(0.001)LS(0.987)DS(0.001)ES(0.009)DDS(0.003)K;KSLS(0.999)DSESDDSK 222.88 3.27E-08 450299000 20014.4 23981.1 22899.2 20828.3 13690.7 12595.4 17822.9 20211.6 5994.98 15797.9 TRUE FALSE 18312.07018 22419.92603 21344.8661 22432.49927 13145.37043 13308.54066 16633.96686 20034.89211 6618.179624 17755.06312 1.031371731 1.262734234 1.202184749 1.263442384 0.740373061 0.749563129 0.936857658 1.128404443 0.372748865 1 14.11594287 -6.259336522 24.99616316 0.82993333 1.196008459 0.455512393 0.197251522 174.3798314 2072811.181 0.057850274 0.071025879 5.50E-07 6.259336522 0.366075129 KSLS(ph)DSESDDSK ddPTM_A459_MK2206_30min_R2 2 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KS(0.219)LS(0.777)DS(0.004)ESDDSK;KS(0.093)LS(0.903)DS(0.003)ES(0.001)DDSK 111.64 0.012052 344390000 26114 28434 28723 25225 30178 20210.4 30699 23698 19780.4 27603 TRUE FALSE 28113.30792 27022.00891 29680.61048 23164.03681 28993.06009 20979.52093 26668.18442 26795.40997 21500.86344 26702.31637 1.052841541 1.011972465 1.11153692 0.867491662 1.085788202 0.785681686 0.998721761 1.003486349 0.805205928 1 14.70467728 -5.757499087 24.99996124 0.938033532 1.054102521 0.274280391 0.091947869 136.9178147 868686.6742 0.023961389 0.039618403 1.75E-06 5.757499087 0.116068989 KSLSDSES(ph)DDSK ddPTM_A459_MK2206_30min_R2 1 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KSLS(0.005)DS(0.261)ES(0.731)DDS(0.003)K 69.069 0.03459 27375000 23623 18096 22783 18036 18607 13967 24503 19648 18241 24163 TRUE FALSE 25431.59504 17197.37895 23542.57385 16562.40111 17876.39569 14498.52397 21285.72667 22216.06106 19827.56921 23374.56329 1.088003003 0.735730492 1.007187752 0.708565157 0.764779879 0.620269298 0.910636336 0.950437481 0.848254103 1 14.51265179 -9.871684863 9.595628113 0.999990208 0.841152855 0.097110189 0.137346221 0 0 0.132274436 0.032081263 1.34E-10 9.871684863 -0.158837353 KSLSDSESDDS(ph)K ddPTM_A459_MK2206_30min_R2 1 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KSLS(0.001)DSES(0.003)DDS(0.996)K 101.97 0.021618 171730000 10437 13015 11913 10657 10956 8814.7 14845 11553 6695.9 11313 TRUE FALSE 11236.06474 12368.69403 12310.17347 9786.28901 10525.81239 9150.149585 12895.83367 13063.01677 7278.297279 10943.85774 1.026700549 1.130195067 1.124847725 0.894226629 0.961800916 0.836099098 1.178362692 1.193639125 0.665057739 1 13.41783376 -5.746049526 24.98270873 0.973227512 1.097542541 0.141169572 0.147767852 523.2097778 849331.6983 0.040556499 0.06992018 1.79E-06 5.746049526 0.12431503 KSMIPSFMTMDQSRK ddPTM_A459_MK2206_30min_R2 1 KSMIPSFMTMDQSRK 15 2 A0A3B3ITE3;Q96CW5-2;Q96CW5 A0A3B3ITE3 TUBGCP3 Gamma-tubulin complex component 3 0 56.569 0.047728 0 8846.8 11656 11486 12010 11223 11853 11880 8628.4 11610 9809 FALSE TRUE 9524.11781 11077.17999 11868.93751 11028.74458 10782.32863 12304.07422 10320.14173 9756.161506 12619.81681 9488.933133 1.00370797 1.167378865 1.250818964 1.162274455 1.136305681 1.296676249 1.087597687 1.028162109 1.329951074 1 13.21203017 -10.34379159 5.45401959 0.99999994 1.162289211 0.186923043 0.101698503 7.25E-08 1.56E-08 0.09585923 0.02324927 4.53E-11 10.34379159 0.162289271 KSMY(ph)T(ph)R ddPTM_A459_MK2206_30min_R1 1 KSMYTR 6 1 H7C0N5;H7C0S6;H7C3P3;Q92556 H7C0N5 ELMO1 Engulfment and cell motility protein 1 2 KS(0.06)MY(0.949)T(0.992)R 63.419 0.030072 6039200 1374.8 770.59 572.2 590.08 3057.6 3021.6 3233.4 1580.8 430.23 438.36 TRUE FALSE 1257.866041 720.4244509 533.3606582 635.5280638 2935.809317 3192.680381 3017.705786 1566.979232 474.9539481 492.6673462 2.55317518 1.462293891 1.082597948 1.289973993 5.959009339 6.480397788 6.125240101 3.180602985 0.964045926 1 8.944470043 -6.241799233 24.94414513 4.295706482 1.550643627 0.262330304 1.881266533 1025.490502 1302433.265 0.589629305 0.760121385 5.73E-07 6.241799233 -2.745062855 KSMY(ph)T(ph)R ddPTM_A459_MK2206_30min_R2 2 KSMYTR 6 1 H7C0N5;H7C0S6;H7C3P3;Q92556 H7C0N5 ELMO1 Engulfment and cell motility protein 1 2 KS(0.081)MY(0.937)T(0.982)R;KS(0.014)MY(0.991)T(0.994)R 60.118 0.033644 19489800 19089.5 71085 40311 128197 99727 242018 41130 54405 145894 38937 TRUE FALSE 20551.0068 67555.02227 41654.94862 117722.895 95811.21689 251228.1646 35729.58159 61515.9203 158583.5964 37666.48888 0.545604526 1.793504632 1.105888812 3.125401345 2.543672632 6.669805763 0.94857744 1.633173734 4.210203848 1 15.20099394 -5.760402971 24.999808 2.966155696 1.212849491 0.192626215 1.611694131 45.94676878 1108244.63 0.447561846 0.722126359 1.74E-06 5.760402971 -1.753306205 KSNLDEEVNVIPPHT(ph)PVR ddPTM_A459_MK2206_30min_R1 4 KSNLDEEVNVIPPHTPVR 18 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR 116.35 0.00057907 119595000 58137.9 54396.3 55062 50785.7 56753.6 50913.6 52493.2 52493.5 41447.7 38348.8 TRUE FALSE 53192.96631 50855.09098 51324.54485 54697.22341 54492.98393 53796.28403 48991.47441 52034.55486 45756.33674 43099.73886 1.23418303 1.179939655 1.190831922 1.269084799 1.264346035 1.248181206 1.136700029 1.207305572 1.061638375 1 15.39539151 -8.33987333 1.164662473 0.996537507 1.225800467 0.793532777 0.038495977 0.209850333 0.59442169 0.038149015 0.0123237 4.57E-09 8.33987333 0.22926296 KSNLDEEVNVIPPHT(ph)PVR ddPTM_A459_MK2206_30min_R2 7 KSNLDEEVNVIPPHTPVR 18 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR 143.29 0.00036743 194017400 857783 1006455 889453 1112554 1180382 990359 1018364 779301 931042 970010 TRUE FALSE 923455.526 956475.9082 919106.9191 1021654.779 1134034.272 1028047.806 884651.5835 881158.3164 1012022.35 938358.6531 0.984117877 1.019307389 0.979483608 1.088767899 1.208529668 1.095580887 0.942764881 0.939042139 1.07850271 1 19.83977992 -10.04741291 7.711659373 1.000002096 1.037699048 0.019777703 0.078835454 0 0 0.08487881 0.020586136 8.97E-11 10.04741291 0.037696952 KSPGDPAKPASS(ph)PR ddPTM_A459_MK2206_30min_R2 1 KSPGDPAKPASSPR 14 2 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3;H7C3V8 C9JWC4 HJURP Holliday junction recognition protein 1 KSPGDPAKPAS(0.125)S(0.875)PR 82.59 0.033386 5175100 34554 49739 39661 46326 48760 63633 46660 32944 48289 45854 TRUE FALSE 37199.48081 47269.03359 40983.27794 42541.01761 46845.4374 66054.5984 40533.48595 37249.89391 52489.08993 44357.78774 0.838623446 1.065630997 0.923925201 0.959042815 1.056081464 1.489131938 0.91378511 0.839759957 1.183311716 1 15.4368998 -6.29518822 5.479860825 1.085338351 0.953278902 0.126169335 0.172283199 0.471265143 40.67161386 0.056340443 0.065667048 5.07E-07 6.29518822 -0.13205945 KSPS(ph)SDSWTCADTSTER ddPTM_A459_MK2206_30min_R1 1 KSPSSDSWTCADTSTER 17 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;H0YIQ0 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 KS(0.011)PS(0.496)S(0.094)DS(0.158)WT(0.019)CADT(0.032)S(0.094)T(0.094)ER 98.077 0.0095796 6634100 1155.3 719.9 857.3 667.5 841.86 652.22 1058.7 673 657.26 854.18 TRUE FALSE 1057.035668 673.0343792 799.1088646 718.9109657 808.3269335 689.1481328 988.0760547 667.116032 725.584529 960.0022671 1.101076221 0.701075823 0.832403101 0.748863821 0.842005234 0.717860943 1.02924346 0.694910892 0.755815433 1 9.906894003 -4.748277836 24.97304646 0.807244492 1.101076938 0.36970205 0.112344478 659.8960729 1252029.193 0.026106255 0.485102202 1.79E-05 4.748277836 0.293832446 KSPS(ph)SDSWTCADTSTER ddPTM_A459_MK2206_30min_R2 1 KSPSSDSWTCADTSTER 17 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;H0YIQ0 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 KS(0.016)PS(0.381)S(0.381)DS(0.111)WT(0.111)CADTSTER 161.25 3.94E-05 8952100 27741 22673 20830 20466 20217 16065 25715 15370 13484 21802 TRUE FALSE 29864.87229 21547.09179 21524.4618 18793.86233 19423.179 16676.36483 22338.58961 17378.91177 14656.81395 21090.60253 1.416027458 1.021644202 1.020571213 0.891101253 0.920939977 0.790701205 1.059172662 0.824012105 0.694945245 1 14.36431269 -1.522878761 0.804100877 0.876669123 137.2389936 0.706855194 0.101348944 273.8748161 0.936384807 0.03559167 68055.26009 0.029999999 1.522878761 136.3623245 KSPSGPVKS(ph)PPLSPVGTTPVK ddPTM_A459_MK2206_30min_R1 2 KSPSGPVKSPPLSPVGTTPVK 21 2 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 1 KS(0.04)PS(0.04)GPVKS(0.916)PPLS(0.003)PVGTTPVK;KS(0.094)PS(0.304)GPVKS(0.537)PPLS(0.054)PVGT(0.008)T(0.003)PVK 57.142 0.029867 49444000 7525.9 8021.3 9109.1 8332.7 7730.7 6784.7 7444.7 8324.3 7627.8 6487.1 TRUE FALSE 6885.782685 7499.111912 8490.799671 8974.485998 7422.769849 7168.843851 6948.077647 8251.521523 8420.737106 7290.770923 0.944451932 1.028575989 1.164595591 1.230937865 1.018104934 0.983276519 0.952996291 1.13177627 1.15498583 1 12.83185566 KSPSGPVKS(ph)PPLSPVGTTPVK ddPTM_A459_MK2206_30min_R2 1 KSPSGPVKSPPLSPVGTTPVK 21 2 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 1 KS(0.019)PS(0.066)GPVKS(0.86)PPLS(0.052)PVGT(0.001)T(0.001)PVK 55.358 0.036953 10256000 39776 53219 49955 45018 48849 44685 53631 42293 38751 44083 TRUE FALSE 42821.28114 50576.22185 51620.47477 41339.88539 46930.94281 46385.51899 46589.18528 47820.84031 42121.49193 42644.57532 1.004143688 1.185994267 1.210481624 0.969405489 1.100513781 1.087723788 1.092499689 1.121381558 0.987733882 1 15.38007461 -8.267125333 24.19880053 0.99386691 1.098768344 0.265507836 0.06821122 433.2486495 1843814.299 0.059936264 0.017215995 5.41E-09 8.267125333 0.104901434 KSPSLES(ph)LSRPPSLGFGDTR ddPTM_A459_MK2206_30min_R2 1 KSPSLESLSRPPSLGFGDTR 20 2 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 KS(0.001)PS(0.033)LES(0.465)LS(0.465)RPPS(0.036)LGFGDT(0.001)R 57.278 0.044078 42143000 43918 46899 52897 61650 55371 53437 59663 49034 44828 56463 TRUE FALSE 47280.39585 44570.06386 54660.55958 56612.99779 53196.85632 55470.58248 51829.17643 55442.91216 48727.05841 54620.61693 0.86561446 0.815993417 1.000731274 1.036476718 0.973933641 1.015561259 0.948894014 1.015054667 0.892100111 1 15.73715799 -5.264094723 24.99860118 0.987077694 0.840803931 0.672452578 0.040336488 115.209356 1084643.57 0.010068363 0.022593799 5.44E-06 5.264094723 -0.146273763 KSPSLESLSRPPS(ph)LGFGDTR ddPTM_A459_MK2206_30min_R2 1 KSPSLESLSRPPSLGFGDTR 20 2 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 KSPS(0.011)LES(0.043)LS(0.16)RPPS(0.625)LGFGDT(0.16)R 60.09 0.03441 36926000 56939 62687 52286 61049 60586 61039 72514 50183 59936 66732 TRUE FALSE 61298.29362 59574.05474 54029.18914 56061.10141 58207.08922 63361.88192 62992.8247 56742.0904 65149.12494 64554.54031 0.949558208 0.922848408 0.83695413 0.868430031 0.90167305 0.981524795 0.975807811 0.878979079 1.009210578 1 15.97823095 -6.683750052 6.127208019 0.961818748 0.891759956 0.407547678 0.043645066 0.236881259 14.49142222 0.014994022 0.014899494 2.07E-07 6.683750052 -0.070058792 KSPT(ph)MEQAVQTASAHLPAPAAVGR ddPTM_A459_MK2206_30min_R1 1 KSPTMEQAVQTASAHLPAPAAVGR 24 1 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 KS(0.395)PT(0.605)MEQAVQTASAHLPAPAAVGR 87.729 4.58E-05 35688000 5831.6 3466.9 4534.2 2999.5 5808.4 6670.9 7073 4323.6 4065.1 4623.3 TRUE FALSE 5335.591797 3241.20418 4226.431137 3230.52201 5577.039129 7048.600593 6601.173075 4285.799221 4487.681692 5196.069308 1.026851545 0.623780013 0.813390062 0.621724195 1.073318849 1.356525515 1.270416672 0.824815638 0.863668559 1 12.34320496 -6.281436049 22.28542419 1.080899818 0.763886301 0.374009532 0.185121081 218.7555094 243792.3077 0.061663224 0.07006339 5.23E-07 6.281436049 -0.317013517 KSPT(ph)MEQAVQTASAHLPAPAAVGR ddPTM_A459_MK2206_30min_R2 5 KSPTMEQAVQTASAHLPAPAAVGR 24 1 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 KS(0.385)PT(0.615)MEQAVQTASAHLPAPAAVGR;KS(0.399)PT(0.6)MEQAVQT(0.001)ASAHLPAPAAVGR;KS(0.394)PT(0.605)MEQAVQTASAHLPAPAAVGR;KS(0.44)PT(0.543)MEQAVQT(0.016)AS(0.001)AHLPAPAAVGR;KS(0.051)PT(0.949)MEQAVQTASAHLPAPAAVGR 89.816 5.94E-05 64330400 66469.9 111126 86035.3 134308.4 100260.3 118848 135674.8 98788.2 93431.2 79549.2 TRUE FALSE 71558.88665 105607.6444 88903.67396 123334.9741 96323.57685 123370.8439 117860.5358 111700.1569 101557.6769 76953.51612 0.929897557 1.372356323 1.155290602 1.602720451 1.251711185 1.603186575 1.531580904 1.451527657 1.319727571 1 16.23169963 -4.249007109 1.204718037 1.408530963 2.61E-12 0.302643976 0.188822451 5.275657682 2.690940436 0.052952123 12.71060494 5.64E-05 4.249007109 -1.408530963 KSPVGKS(ph)PPSTGSTYGSSQK ddPTM_A459_MK2206_30min_R2 1 KSPVGKSPPSTGSTYGSSQK 20 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KS(0.032)PVGKS(0.879)PPS(0.041)T(0.015)GS(0.007)T(0.009)Y(0.002)GS(0.011)S(0.004)QK 56.347 0.047281 8061600 16365 21998 21015 24545 17053 18987 20430 16989 15891 17256 TRUE FALSE 17617.91698 20905.61131 21715.62961 22539.59498 16383.41354 19709.56359 17747.51646 19209.52063 17273.17046 16692.93813 1.055411387 1.252362594 1.300887204 1.35024732 0.981457752 1.180712672 1.063175117 1.150757313 1.034759149 1 14.02695029 -6.262574703 24.99968044 1.081361557 1.244998235 0.45200723 0.091644854 101.8939033 2243692.618 0.027875106 0.033410543 5.46E-07 6.262574703 0.163636678 KSS(ph)ADTEFSDECTTAER ddPTM_A459_MK2206_30min_R1 3 KSSADTEFSDECTTAER 17 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 KS(0.07)S(0.93)ADT(0.001)EFSDECTTAER;KS(0.003)S(0.984)ADT(0.006)EFS(0.006)DECT(0.001)TAER;KS(0.004)S(0.993)ADT(0.004)EFSDECTTAER 233.57 1.69E-16 32387800 6565.7 7201.8 6655.5 5697.2 5718.4 4400.18 5010.3 3993 4106.82 4648.8 TRUE FALSE 6007.252737 6732.961511 6203.743203 6135.999331 5490.624019 4649.314389 4676.072029 3958.089622 4533.738635 5224.728441 1.1497732 1.28867205 1.187380985 1.174414977 1.050891751 0.889867185 0.89498853 0.757568487 0.867746274 1 12.35114034 -6.529913521 1.627007463 0.857853608 1.216312069 0.841383284 0.065013806 0.127197129 0.685270109 0.024754972 0.027017577 2.95E-07 6.529913521 0.358458461 KSS(ph)ADTEFSDECTTAER ddPTM_A459_MK2206_30min_R2 2 KSSADTEFSDECTTAER 17 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 KS(0.217)S(0.774)ADT(0.008)EFSDECTTAER;KS(0.001)S(0.998)ADTEFSDECTTAER 239.86 2.63E-22 36202400 81556 99945 99593 97901 88648 68080 73579 53104 56346 58303 TRUE FALSE 87799.99007 94981.87663 102913.3809 89902.17513 85167.2341 70670.83211 63917.98892 60044.87513 61246.87323 56400.57788 1.556721462 1.684058572 1.824686639 1.593993865 1.51004187 1.253016099 1.133286064 1.064614537 1.085926342 1 15.78342232 -6.786865537 1.33053216 1.056702743 1.689185799 0.941629213 0.067932082 0.095461746 0.353744284 0.034134139 0.030112745 1.63E-07 6.786865537 0.632483056 KSS(ph)GTGTEPVAK ddPTM_A459_MK2206_30min_R2 2 KSSGTGTEPVAK 12 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9;A0A0U1RR74 Q6ULP2-7 AFTPH Aftiphilin 1 KS(0.396)S(0.57)GT(0.02)GT(0.014)EPVAK;KS(0.177)S(0.822)GT(0.001)GTEPVAK 141.06 0.0018372 14061400 43752 48036 39658 38551 42306 30331 49320 43006 33146 45623 TRUE FALSE 47101.68676 45650.60209 40980.17793 35401.25998 40644.85387 31485.26746 42844.22476 48627.03186 36028.97917 44134.32525 1.067234777 1.034355954 0.928533011 0.802125325 0.920935205 0.713396371 0.970768773 1.1017962 0.81634825 1 15.42961352 -5.261170056 3.590318615 0.901160034 1.057855547 0.239150988 0.103855318 0.330212423 9.322610203 0.028469821 0.077441352 5.48E-06 5.261170056 0.156695513 KSS(ph)PEMEDAR ddPTM_A459_MK2206_30min_R1 3 KSSPEMEDAR 10 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 KS(0.067)S(0.933)PEMEDAR;KS(0.063)S(0.937)PEMEDAR;KS(0.005)S(0.995)PEMEDAR 160.86 0.00078136 55127000 12775.6 13653 14227.9 12504.2 12595.8 10779.7 12763.3 12251.8 7979.3 10496.2 TRUE FALSE 11688.96813 12764.18722 13262.14979 13467.27565 12094.08261 11390.0373 11911.88354 12144.6838 8808.776789 11796.5485 0.990880352 1.082027274 1.124239839 1.141628473 1.025222133 0.965539819 1.009777016 1.029511624 0.746724925 1 13.52607719 -7.270310918 0.931682957 0.911067463 1.082619727 0.379786843 0.081808683 0.615238049 1.036359833 0.062556729 0.035814695 5.37E-08 7.270310918 0.171552264 KSS(ph)PEMEDAR ddPTM_A459_MK2206_30min_R2 1 KSSPEMEDAR 10 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 KS(0.189)S(0.811)PEMEDAR 128.68 0.0055265 16238000 43789 50645 50288 49602 52717 43538 52404 52236 42091 61001 TRUE FALSE 47141.51951 48130.04294 51964.57682 45549.35793 50647.0657 45194.8691 45523.29185 59063.42455 45751.9991 59010.54237 0.798866061 0.815617702 0.88059819 0.771885092 0.858271483 0.76587788 0.771443373 1.000896148 0.775319075 1 15.8486851 -9.603963888 0.438927386 1.025348807 0.813437067 0.364141196 0.068883801 5.182529828 1.22128426 0.299440943 0.040123387 2.49E-10 9.603963888 -0.21191174 KSS(ph)PPASSPQPEAPTSSWR ddPTM_A459_MK2206_30min_R2 1 KSSPPASSPQPEAPTSSWR 19 1 P43250-2 P43250-2 1 KS(0.037)S(0.962)PPASSPQPEAPTSSWR 103.84 0.00049437 15406000 9795.6 11865 8798.4 11233 10900 11778 10028 7349.4 10491 10179 TRUE FALSE 10545.55867 11275.80135 9091.734265 10315.22797 10472.01123 12226.22004 8711.311554 8309.991814 11403.48822 9846.860064 1.070956488 1.145116441 0.923313036 1.047565204 1.063487362 1.241636417 0.884679126 0.843923013 1.158083708 1 13.26544804 -7.298885728 24.99983773 0.958665065 1.075259549 0.195020576 0.108022749 945.3428337 631123.6746 0.045445746 0.030640517 5.02E-08 7.298885728 0.116594484 KSS(ph)PSTGSLDSGNESK ddPTM_A459_MK2206_30min_R1 4 KSSPSTGSLDSGNESK 16 1 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 "Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2" 1 KS(0.035)S(0.732)PS(0.111)T(0.111)GS(0.01)LDSGNESK;KS(0.001)S(0.497)PS(0.497)T(0.003)GS(0.001)LDSGNESK;KS(0.188)S(0.797)PS(0.012)T(0.003)GS(0.001)LDSGNESK;KSS(0.995)PS(0.004)TGSLDSGNESK 209.33 9.93E-08 23339400 5217.99 6272.17 5614.48 5768.45 5008.12 4683.19 5124.89 5469.15 5103.09 4131.82 TRUE FALSE 4774.17255 5863.850593 5233.38474 6212.737018 4808.635976 4948.348171 4783.017939 5421.333798 5633.574467 4643.701055 1.028096446 1.262753679 1.126985712 1.337884792 1.035517988 1.065604377 1.03000126 1.167459691 1.213164758 1 12.18105938 -6.321237191 24.99992889 1.089915488 1.189780874 0.214763614 0.096836512 410.4660644 171604.2196 0.029689563 0.03366482 4.77E-07 6.321237191 0.099865386 KSS(ph)PSTGSLDSGNESK ddPTM_A459_MK2206_30min_R2 4 KSSPSTGSLDSGNESK 16 1 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 "Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2" 1 KS(0.01)S(0.882)PS(0.107)T(0.001)GSLDSGNESK;KS(0.06)S(0.467)PS(0.467)T(0.006)GS(0.001)LDSGNESK;KS(0.074)S(0.823)PS(0.095)T(0.008)GSLDSGNESK;KS(0.195)S(0.704)PS(0.085)T(0.015)GS(0.001)LDSGNESK 196.65 2.07E-06 29680900 81227 111539 93667 100923 92366 75444 107851 85259 88666 102794 TRUE FALSE 87445.80157 106000.1355 96789.81103 92677.26806 88739.24674 78315.07429 93690.03415 96402.64404 96378.00841 99439.8402 0.879383971 1.065972504 0.973350428 0.931993333 0.892391285 0.787562351 0.942178044 0.969456948 0.969209204 1 16.60153636 -11.11966441 14.34573319 1.000000106 0.935217621 0.074605139 0.06905876 2.53E-07 7.11E-09 0.072045635 0.017473604 7.59E-12 11.11966441 -0.064782486 KSS(ph)TPLSEAK ddPTM_A459_MK2206_30min_R2 2 KSSTPLSEAK 10 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KS(0.063)S(0.737)T(0.195)PLS(0.005)EAK;KS(0.002)S(0.968)T(0.03)PLSEAK 215.02 0.00026749 19128800 97872 80379 70844 83793 84744 59583 91862 65749 59592 83568 TRUE FALSE 105365.1556 76387.49574 73205.9036 76946.84386 81416.52476 61850.47282 79800.40905 74342.62005 64775.20444 80841.183 1.303359892 0.944908188 0.905552107 0.951827287 1.007116939 0.765086191 0.987125696 0.919613213 0.801264925 1 16.30280281 -4.760686689 4.669932582 0.916275741 1.33340621 0.696810508 0.076000465 0.104770896 5.338140768 0.018305305 0.146329969 1.74E-05 4.760686689 0.41713047 KSS(ph)TSGSDFDTK ddPTM_A459_MK2206_30min_R2 2 KSSTSGSDFDTK 12 1 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 KS(0.079)S(0.889)T(0.032)SGSDFDTK;KS(0.01)S(0.945)T(0.032)S(0.01)GS(0.003)DFDTK 162.64 0.00086667 17657200 85184 90662 82266 81507 61387 49219 106833 79958 57452 74414 TRUE FALSE 91705.75254 86159.85691 85008.70738 74847.61737 58976.63794 51092.06353 92805.69877 90408.78514 62449.07111 71985.87727 1.27394089 1.19689945 1.180908125 1.039754188 0.819280672 0.709751211 1.289220918 1.25592392 0.867518373 1 16.13542628 -5.739065853 3.359908065 0.998393818 1.224835875 0.267000791 0.169429388 0.375137742 8.784055993 0.05351569 0.093561816 1.82E-06 5.739065853 0.226442057 KSSADTEFS(ph)DECTTAER ddPTM_A459_MK2206_30min_R2 1 KSSADTEFSDECTTAER 17 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 KS(0.001)S(0.048)ADT(0.003)EFS(0.729)DECT(0.216)T(0.003)AER 169.98 1.67E-06 9395700 30985 40348 37577 38232 33497 19812 29164 19994 21679 23798 TRUE FALSE 33357.23542 38344.37699 38829.79843 35108.3233 32181.73947 20565.95954 25334.73177 22607.28445 23564.60023 23021.47321 1.448961807 1.6655918 1.686677393 1.525025049 1.397900959 0.893338118 1.100482647 0.98200859 1.023592192 1 14.49069254 -6.580922281 3.211671332 1.004941729 1.589470687 0.91766489 0.082699113 0.065558651 1.380114095 0.029112423 0.029844453 2.62E-07 6.580922281 0.584528958 KSSEGGVGVGPGGGDEPPT(ph)SPR ddPTM_A459_MK2206_30min_R1 2 KSSEGGVGVGPGGGDEPPTSPR 22 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 KSSEGGVGVGPGGGDEPPT(0.732)S(0.268)PR;KSSEGGVGVGPGGGDEPPT(0.8)S(0.2)PR 109.4 6.46E-05 16735000 5699.4 5546.4 4504 4090.2 5546.4 4633.8 5003 4795.5 3777.1 3486.9 TRUE FALSE 5214.636101 5185.328352 4198.281029 4405.227913 5325.475143 4896.161752 4669.258998 4753.573449 4169.743061 3918.883497 1.330643308 1.323164712 1.071295187 1.1241028 1.35892663 1.249376705 1.191476859 1.212991775 1.064013019 1 11.93622697 -8.341819626 1.988230172 0.997889751 1.234247723 0.476647712 0.085733255 0.303227945 2.339866917 0.086977063 0.024950342 4.55E-09 8.341819626 0.236357972 KSSEGGVGVGPGGGDEPPT(ph)SPR ddPTM_A459_MK2206_30min_R2 2 KSSEGGVGVGPGGGDEPPTSPR 22 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 KSSEGGVGVGPGGGDEPPT(0.5)S(0.5)PR;KSSEGGVGVGPGGGDEPPT(0.5)S(0.5)PR 114.03 4.47E-05 32267000 294130 363970 308700 361980 300960 324070 338840 278800 270660 318430 TRUE FALSE 316648.8189 345895.7791 318991.9039 332405.0761 289142.7982 336402.7109 294349.901 315240.1173 294201.5176 308039.6552 1.027948232 1.12289367 1.035554671 1.079098325 0.938654467 1.092075989 0.955558468 1.023375114 0.955076766 1 18.23275656 -6.23148855 24.95355219 0.998261591 1.068209514 0.355802083 0.047405256 762.4466918 635233.1728 0.013057984 0.016855715 5.87E-07 6.23148855 0.069947923 KSSEGGVGVGPGGGDEPPTS(ph)PR ddPTM_A459_MK2206_30min_R1 1 KSSEGGVGVGPGGGDEPPTSPR 22 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 KSSEGGVGVGPGGGDEPPT(0.424)S(0.576)PR 103.27 4.55E-05 11008000 3196.3 2720.3 2571 2507.1 2618.8 2682.9 3338.1 2505 1974 2140.9 TRUE FALSE 2924.437901 2543.207976 2396.487683 2700.197276 2514.487651 2834.803479 3115.42144 2483.099049 2179.204364 2406.130855 1.215410997 1.056969936 0.99599225 1.122215473 1.045033625 1.178158484 1.294784709 1.031988366 0.905688217 1 11.23249939 -7.996314859 24.9993753 0.958175465 1.123244264 0.41617927 0.084937583 105.9101179 718477.4745 0.049610731 0.023656113 1.01E-08 7.996314859 0.165068799 KSSGEIVYCGQVFEKS(ph)PLR ddPTM_A459_MK2206_30min_R1 2 KSSGEIVYCGQVFEKSPLR 19 2 M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543 M0R0P7 RPL18A 60S ribosomal protein L18a 1 KSSGEIVY(0.002)CGQVFEKS(0.998)PLR;KSSGEIVYCGQVFEKS(1)PLR 87.05 0.0038897 49291000 3488.33 2944.76 3611.67 3248.14 3207.22 3446.77 3145.39 3083.77 3193.52 2663.61 TRUE FALSE 3191.629216 2753.055589 3366.519903 3498.312306 3079.469636 3641.923139 2935.566772 3056.808924 3525.497832 2993.598116 1.066151531 0.919647689 1.124573097 1.168597844 1.028685053 1.216570494 0.980614852 1.021115329 1.177679066 1 11.54766484 -5.276568409 24.94086888 1.091753243 0.992899601 0.175314115 0.08391319 1126.838276 1857641.435 0.021311877 0.044628916 5.29E-06 5.276568409 -0.098853643 KSSGEIVYCGQVFEKS(ph)PLR ddPTM_A459_MK2206_30min_R2 3 KSSGEIVYCGQVFEKSPLR 19 2 M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543 M0R0P7 RPL18A 60S ribosomal protein L18a 1 KSSGEIVY(0.002)CGQVFEKS(0.998)PLR;KSSGEIVY(0.002)CGQVFEKS(0.998)PLR;KSSGEIVYCGQVFEKS(1)PLR 80.412 0.0071636 39162200 94009 133618 112043 136616 137579 100662 132518 113378 94203 108841 TRUE FALSE 101206.4013 126982.7244 115778.4577 125454.0358 132176.9572 104492.7629 115118.2274 128196.8939 102396.6067 105289.5271 0.96122002 1.206033762 1.099619885 1.191514857 1.255366615 0.992432636 1.093349268 1.217565483 0.972524139 1 16.68400242 -6.776098984 24.99989548 1.071158117 1.146579693 0.155401646 0.098422266 533.3744416 909589.4681 0.034219893 0.030309806 1.67E-07 6.776098984 0.075421576 KSSS(ph)LESLQTAVAEVR ddPTM_A459_MK2206_30min_R2 1 KSSSLESLQTAVAEVR 16 1 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 KS(0.08)S(0.296)S(0.585)LES(0.037)LQT(0.001)AVAEVR 66.636 0.026989 4841000 14374 13465 8170.2 20018 14244 15906 18397 13214 12579 18865 TRUE FALSE 15474.48449 12796.34768 8442.59039 18382.46537 13684.70899 16511.31398 15981.4518 14941.11517 13673.09868 18249.43659 0.847943136 0.701191383 0.462621974 1.007289473 0.749870218 0.904757464 0.875723024 0.818716517 0.749234017 1 14.1555643 -5.773969564 24.99941085 0.861076611 0.673646022 0.367929024 0.12047406 246.2253392 491252.5448 0.033372059 0.049881571 1.68E-06 5.773969564 -0.187430589 KSSSGPVWSGASSACTS(ph)PAVGK ddPTM_A459_MK2206_30min_R1 1 KSSSGPVWSGASSACTSPAVGK 22 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 KSSSGPVWSGASS(0.002)ACT(0.246)S(0.753)PAVGK 131.31 1.19E-05 7978100 2849.9 2780.4 2237.2 2099.7 2266.4 2079.8 2250.6 2667.4 1717.3 1829.6 TRUE FALSE 2607.50104 2599.395455 2085.345097 2261.419258 2176.124489 2197.556479 2100.46658 2644.079203 1895.81948 2056.264661 1.268076571 1.264134673 1.014142361 1.099770521 1.058290078 1.068712856 1.021496221 1.285865216 0.921972505 1 11.00581025 -5.25063965 24.12956656 1.06946015 1.266105685 0.459508415 0.089342537 387.4276277 865612.386 0.021398397 0.055306665 5.62E-06 5.25063965 0.196645535 KSSVNGS(ph)SATSSG ddPTM_A459_MK2206_30min_R2 1 KSSVNGSSATSSG 13 1 R4GMX3;P35226 R4GMX3 COMMD3-BMI1;BMI1 Polycomb complex protein BMI-1 1 KS(0.301)S(0.301)VNGS(0.349)S(0.048)ATSSG 88.803 0.041857 1763700 18531 16964 13495 17006 14796 9958.9 15462 18828 16512 14972 TRUE FALSE 19949.74761 16121.59243 13944.91656 15616.5554 14215.0347 10337.89292 13431.82083 21288.88425 17948.18391 14483.46487 1.377415404 1.113103292 0.962816335 1.078233389 0.98146644 0.713772085 0.927390024 1.469875092 1.239218935 1 13.82211916 -10.17086504 10.769887 1.000000316 1.083427342 0.01515317 0.211396594 0 0 0.222556749 0.05397794 6.75E-11 10.17086504 0.083427027 KSSVNGSS(ph)ATSSG ddPTM_A459_MK2206_30min_R2 2 KSSVNGSSATSSG 13 1 R4GMX3;P35226 R4GMX3 COMMD3-BMI1;BMI1 Polycomb complex protein BMI-1 1 KS(0.079)S(0.079)VNGS(0.129)S(0.71)AT(0.002)SSG;KS(0.167)S(0.167)VNGS(0.119)S(0.541)AT(0.005)SSG 112.64 0.0086906 50688000 69719 58497 55827 51858 48601 35040.6 48338 60878 56295 50855 TRUE FALSE 75056.74024 55592.12404 57688.24432 47621.03551 46692.68054 36374.09459 41991.16254 68834.96363 61191.43734 49195.60551 1.525679773 1.130022153 1.172630029 0.967993686 0.949122997 0.739376906 0.853555152 1.399209602 1.2438395 1 15.58624183 -4.086016324 1.178233927 1.024826831 3.157736547 0.395419204 0.180440556 7.875150199 2.848924711 0.060827642 30.75098286 8.20E-05 4.086016324 2.132909716 KSVAAEGALLPQT(ph)PPSPR ddPTM_A459_MK2206_30min_R1 1 KSVAAEGALLPQTPPSPR 18 1 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 KSVAAEGALLPQT(0.82)PPS(0.18)PR 106.74 0.0020461 8358800 6561.3 6497.9 6844.9 6605.5 7045.3 6579 6220.1 5841 5470.5 4641.3 TRUE FALSE 6003.22698 6074.885529 6380.287259 7114.256755 6764.670782 6951.497295 5805.168478 5789.932753 6039.178051 5216.299284 1.150859384 1.164596814 1.2231444 1.363851337 1.296833332 1.332649243 1.112890224 1.109969432 1.157751448 1 12.34881093 -7.330364284 8.350682062 1.103640191 1.256464756 0.534162144 0.073108825 0.336603322 37.93072562 0.033569527 0.022592445 4.67E-08 7.330364284 0.152824565 KSVSS(ph)PTSSNTPTPTK ddPTM_A459_MK2206_30min_R2 2 KSVSSPTSSNTPTPTK 16 1 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 KS(0.036)VS(0.069)S(0.843)PT(0.017)S(0.025)S(0.006)NTPT(0.001)PT(0.001)K;KS(0.213)VS(0.154)S(0.629)PT(0.002)S(0.001)S(0.001)NTPTPTK 75.611 0.015705 45073000 130317 186866 120944 134478 136326 108122 153999 133423 123407 140946 TRUE FALSE 140294.1697 177586.5062 124976.2126 123490.7172 130973.1563 112236.6585 133778.7463 150861.8442 134140.7178 136346.9436 1.028949869 1.302460484 0.916604431 0.905709464 0.960587402 0.823169596 0.981164248 1.106455636 0.98381903 1 17.05692283 -5.278755198 24.97419905 0.957486271 1.165705191 0.443796002 0.092228058 632.2045551 911813.3773 0.02460559 0.051422531 5.26E-06 5.278755198 0.20821892 KSYES(ph)SEDCSEAAGSPAR ddPTM_A459_MK2206_30min_R1 2 KSYESSEDCSEAAGSPAR 18 1 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 KS(0.035)YES(0.864)S(0.101)EDCS(0.001)EAAGSPAR;KS(0.151)YES(0.816)S(0.033)EDCSEAAGSPAR 169.43 1.77E-07 14233100 1901.45 1967.5 1745.12 1825.11 1880.09 1634.82 1717.02 2028.28 1421.74 1029.52 TRUE FALSE 1739.721693 1839.415392 1626.666117 1965.680288 1805.202034 1727.382096 1602.480729 2010.546962 1569.534961 1157.06471 1.503564734 1.589725602 1.405855785 1.698850783 1.560156505 1.492900164 1.384953421 1.73762707 1.356479847 1 10.17625384 -8.536238078 21.21119901 0.999999996 1.542107903 0.713703916 0.106093553 131.3029088 208476.307 0.097675666 0.025219748 2.91E-09 8.536238078 0.542107907 KSYES(ph)SEDCSEAAGSPAR ddPTM_A459_MK2206_30min_R2 1 KSYESSEDCSEAAGSPAR 18 1 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 KS(0.012)YES(0.827)S(0.161)EDCS(0.001)EAAGSPAR 114.19 0.00057086 13529000 13643 20343 21577 22642 25106 17884 26967 15789 17032 19559 TRUE FALSE 14687.51857 19332.7962 22296.36641 20792.07617 24120.21229 18564.58815 23426.20051 17852.67651 18513.41257 18920.79143 0.776263436 1.02177524 1.178405591 1.098900976 1.274799333 0.981173976 1.238119483 0.943548084 0.978469248 1 14.20768482 -4.797167903 3.443888361 1.093920077 0.742228356 0.419611035 0.108867377 0.267433289 5.211803609 0.027303898 0.242722311 1.60E-05 4.797167903 -0.351691722 KSYESSEDCSEAAGS(ph)PAR ddPTM_A459_MK2206_30min_R1 7 KSYESSEDCSEAAGSPAR 18 1 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR 240.21 8.92E-25 207370600 31869.6 31524.9 30432.88 28253.41 33603.9 27323.67 29931.19 29657.35 23410.32 20358.69 TRUE FALSE 29158.92317 29472.62328 28367.1809 30429.49253 32265.38551 28870.71258 27934.53493 29398.05892 25843.90654 22880.87822 1.274379545 1.288089688 1.239776753 1.329909291 1.410146289 1.261783412 1.220868127 1.284830881 1.129498015 1 14.48185481 -8.525817657 1.096607785 0.997879777 1.298789011 0.780177162 0.049847397 0.262276483 0.691884702 0.050591521 0.016290359 2.98E-09 8.525817657 0.300909234 KSYESSEDCSEAAGS(ph)PAR ddPTM_A459_MK2206_30min_R2 6 KSYESSEDCSEAAGSPAR 18 1 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR;KSYESSEDCS(0.003)EAAGS(0.997)PAR;KSYESSEDCSEAAGS(1)PAR 146.34 0.00012676 126610600 99686.5 142547 118649 139749.7 140907 131575.4 138182.9 115808.4 118576.6 122380.8 TRUE FALSE 107318.5751 135468.3233 122604.6984 128331.7025 135374.2832 136582.594 120039.3192 130944.9555 128890.1783 118387.5245 0.9065024 1.144278705 1.035621776 1.08399684 1.143484364 1.153690768 1.013952439 1.10607056 1.088714194 1 16.85315753 -4.750544928 24.96629078 1.088945176 0.906502005 0.516327542 0.051889001 371.6746455 851692.7327 0.012513114 0.183112688 1.78E-05 4.750544928 -0.182443172 KT(ph)ASPEDSDMPDHDLEPPR ddPTM_A459_MK2206_30min_R2 1 KTASPEDSDMPDHDLEPPR 19 1 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 KT(0.469)AS(0.469)PEDS(0.062)DMPDHDLEPPR 51.535 0.043463 5267900 27372 39218 27750 30537 36077 30765 35683 24774 32148 26464 TRUE FALSE 29467.62137 37270.49115 28675.17115 28042.02942 34660.43571 31935.78363 30997.77924 28012.04686 34944.17493 25600.48185 1.151057294 1.455851158 1.12010279 1.095371157 1.353897787 1.247468068 1.210827961 1.094199985 1.364981141 1 14.64388334 -11.0651154 2.866058374 0.988733857 1.231146793 0.257921968 0.118357629 27475151.79 29405941.9 2392243.92 0.029835802 8.61E-12 11.0651154 0.242412936 KT(ph)PELGIVPPPPIPR ddPTM_A459_MK2206_30min_R1 1 KTPELGIVPPPPIPR 15 1 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3 DENND1A DENN domain-containing protein 1A 1 KT(1)PELGIVPPPPIPR 84.895 0.026557 18847000 2462.2 2545.8 2672.6 2681.5 2389 2136.4 2586.3 2474.3 2549.9 1919.7 TRUE FALSE 2252.77696 2380.067957 2491.191358 2888.029595 2293.841071 2257.361122 2413.772646 2452.667456 2814.97123 2157.526929 1.044147783 1.10314635 1.154651339 1.338583336 1.063180737 1.046272513 1.118768259 1.136795756 1.304721249 1 11.07516285 -10.67451864 4.98826669 0.999991563 1.143888243 0.171200679 0.096031864 70897959.64 4.465672335 6870.337851 0.02400386 2.12E-11 10.67451864 0.14389668 KT(ph)PELGIVPPPPIPR ddPTM_A459_MK2206_30min_R2 2 KTPELGIVPPPPIPR 15 1 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3 DENND1A DENN domain-containing protein 1A 1 KT(1)PELGIVPPPPIPR;KT(1)PELGIVPPPPIPR 94.325 0.014427 47545000 42276 50992 49965 52482 54170 40648 62181 43381 44521 53212 TRUE FALSE 45512.68306 48459.81143 51630.80816 48194.05272 52043.01362 42194.88812 54016.56001 49051.04565 48393.3561 51475.6968 0.884158659 0.941411471 1.003013293 0.936248671 1.011021061 0.81970504 1.049360443 0.952897167 0.940120467 1 15.65160383 -1.522906127 0.007929637 1.81966035 7.48E-06 0.079787794 0.061005246 61524.86427 37.88538904 3864.479895 4884.52244 0.029998109 1.522906127 -1.819652873 KT(ph)PESFLGPNAALVDLDSLVSR ddPTM_A459_MK2206_30min_R1 1 KTPESFLGPNAALVDLDSLVSR 22 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 KT(0.639)PES(0.361)FLGPNAALVDLDSLVSR 76.267 0.0021447 6509300 398.14 474.44 693.01 421.75 419.43 517.34 719.21 651.32 889.59 1118.5 TRUE FALSE 364.2761023 443.5538698 645.970412 454.2332581 402.7232149 546.6313437 671.2328132 645.6255779 982.0660639 1257.068224 0.289782285 0.352847889 0.513870607 0.361343362 0.320367031 0.434846203 0.533966892 0.513596291 0.781235294 1 10.29584724 -8.355128293 0.843315077 1.005911336 0.374122709 0.906738829 0.064866565 0.169676 0.266261349 0.064186083 0.023689747 4.41E-09 8.355128293 -0.631788628 down KT(ph)PESFLGPNAALVDLDSLVSR ddPTM_A459_MK2206_30min_R2 1 KTPESFLGPNAALVDLDSLVSR 22 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 KT(0.723)PES(0.277)FLGPNAALVDLDSLVSR 69.581 0.0057093 10291000 15884 8701.7 10710 12762 10974 10323 22430 15287 10634 21195 TRUE FALSE 17100.09125 8269.586231 11067.06605 11719.30378 10543.10562 10715.849 19484.91406 17285.06339 11558.9261 20503.40889 0.834012107 0.403327382 0.539767124 0.571578309 0.514212328 0.522637434 0.950325586 0.843033638 0.563756308 1 14.32357617 -7.249053307 24.91641254 0.826198354 0.553885861 0.45143199 0.14797812 665.0501747 1337848.583 0.054984846 0.042275425 5.64E-08 7.249053307 -0.272312493 KT(ph)PESFLGPNAALVDLDSLVSRPGPTPPGAK ddPTM_A459_MK2206_30min_R1 1 KTPESFLGPNAALVDLDSLVSRPGPTPPGAK 31 2 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 KT(0.935)PES(0.065)FLGPNAALVDLDSLVSRPGPTPPGAK 123.85 1.19E-16 13306000 743.15 589.1 547.73 546.23 460.31 487.99 854.36 734.05 730.54 729.27 TRUE FALSE 679.9411901 550.7494829 510.5516137 588.3007292 441.974878 515.6195721 797.3672033 727.6322782 806.4822473 819.6174733 0.829583571 0.671959177 0.622914506 0.717774753 0.539245309 0.629097828 0.97285286 0.887770578 0.983973956 1 9.678806931 -7.262972276 24.99922733 0.95179691 0.662891776 0.78309959 0.075372945 66.13321729 1078518.924 0.031087635 0.022227431 5.46E-08 7.262972276 -0.288905134 KT(ph)PESFLGPNAALVNLDSLVTR ddPTM_A459_MK2206_30min_R1 1 KTPESFLGPNAALVNLDSLVTR 22 1 I3L2B2;O95208-3;O95208-2;O95208;I3L356;I3L2H1;O95208-5 I3L2B2 EPN2 Epsin-2 1 KT(0.864)PES(0.136)FLGPNAALVNLDSLVTR 84.03 0.00088302 3493300 799.94 576.45 706.55 460.88 654.75 577.21 998.88 610.34 1006.4 1210.9 TRUE FALSE 731.9009023 538.9230002 658.5913546 496.3770575 628.669921 609.8911314 932.2465378 605.0038617 1111.018881 1360.915434 0.537800428 0.396000359 0.483932608 0.364737621 0.461946353 0.448147707 0.685014303 0.444556544 0.816376135 1 10.41036171 -8.495234022 0.789189413 1.008436142 0.445109233 0.792347105 0.089012844 0.282578855 0.396677125 0.081343387 0.030330054 3.20E-09 8.495234022 -0.563326909 KT(ph)PPAPSPFDLPELK ddPTM_A459_MK2206_30min_R1 1 KTPPAPSPFDLPELK 15 1 O95239 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 KT(1)PPAPSPFDLPELK 109.5 0.0046578 5297800 4633.8 4548.6 4326.3 3974.3 3611.6 3382.1 3722.3 3576.8 4341.9 3706.3 TRUE FALSE 4239.670977 4252.485313 4032.64281 4280.401275 3467.742324 3573.591579 3473.992159 3545.528415 4793.256043 4165.464425 1.017814713 1.020891041 0.968113612 1.027592805 0.832498365 0.857909518 0.833998758 0.851172415 1.150713475 1 12.02426164 -6.241132493 24.85018994 0.90609791 1.006588662 0.164006188 0.093199024 1258.796402 1540429.191 0.027739271 0.035763817 5.74E-07 6.241132493 0.100490752 KT(ph)PPAPSPFDLPELK ddPTM_A459_MK2206_30min_R2 1 KTPPAPSPFDLPELK 15 1 O95239 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 KT(0.998)PPAPS(0.002)PFDLPELK 84.046 0.027869 8279400 45525 38338 43240 43136 47547 33874 50435 39687 33906 52957 TRUE FALSE 49010.429 36434.19067 44681.60002 39611.65081 45680.06588 35163.09881 43812.82392 44874.22717 36855.08259 51229.01743 0.956692739 0.711202215 0.872193188 0.773226831 0.891683428 0.686390264 0.855234516 0.875953306 0.719418104 1 15.6446736 -10.7640851 5.407634213 1.000014627 0.814466692 0.295545193 0.085304 1.37E-05 1.93E-06 0.075364679 0.018277179 1.72E-11 10.7640851 -0.185547935 KT(ph)PQGPPEIYSDTQFPSLQSTAK ddPTM_A459_MK2206_30min_R2 1 KTPQGPPEIYSDTQFPSLQSTAK 23 1 Q9UKY7;Q9UKY7-2;D6R9V8;H0Y8K3;D6RFH2;D6RDN0;Q9UKY7-3 Q9UKY7 CDV3 Protein CDV3 homolog 1 KT(0.557)PQGPPEIY(0.441)S(0.002)DTQFPSLQSTAK 99.569 6.57E-05 6235100 18436 16652 17118 19332 14649 15485 17081 13051 15554 17530 TRUE FALSE 19847.47433 15825.08589 17688.70558 17752.51376 14073.80665 16074.29253 14838.24418 14756.81051 16906.8588 16957.99754 1.170390212 0.933193077 1.043089288 1.046852007 0.829921494 0.947888599 0.874999784 0.870197703 0.996984389 1 14.0496782 -1.522878918 0.599507183 0.922931149 14.3222422 0.42728951 0.073163327 164.786421 1.279001683 0.033147584 2891.910239 0.029999988 1.522878918 13.39931105 KT(ph)SASDVTNIYPGDAGK ddPTM_A459_MK2206_30min_R2 1 KTSASDVTNIYPGDAGK 17 1 Q15042-4;Q15042;Q15042-3 Q15042-4 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit 1 KT(0.338)S(0.33)AS(0.33)DVT(0.003)NIYPGDAGK 97.69 0.0068518 23625000 203620 220540 189840 189120 168880 133550 191650 127470 130180 141520 TRUE FALSE 219209.3038 209588.3043 196169.1708 173668.291 162248.9226 138632.3388 166486.1248 144130.7667 141502.8211 136902.214 1.601210801 1.530934367 1.432914524 1.268557213 1.185144622 1.012637669 1.216095196 1.052800846 1.03360506 1 17.06278625 -5.7339094 0.820584253 1.058356702 1.654117229 0.92455273 0.057827575 0.220009968 0.260385619 0.026212081 0.093834756 1.85E-06 5.7339094 0.595760528 KT(ph)SDANETEDHLESLICK ddPTM_A459_MK2206_30min_R1 2 KTSDANETEDHLESLICK 18 1 F2Z2T1;Q09161 F2Z2T1 NCBP1 Nuclear cap-binding protein subunit 1 1 KT(0.465)S(0.465)DANET(0.07)EDHLESLICK;KT(0.395)S(0.395)DANET(0.209)EDHLESLICK 54.768 0.038875 107530000 17843.6 16799 17806.8 11635.5 12013.4 9927.1 11379.4 10395.8 11550.1 10836.5 TRUE FALSE 16325.90812 15705.38205 16598.12403 12531.66823 11534.88084 10489.16382 10620.30099 10304.91062 12750.77423 12179.00743 1.340495784 1.289545321 1.362847024 1.028956448 0.947111733 0.86124948 0.872016956 0.846120727 1.046946912 1 13.57210894 -5.886117283 3.252720604 0.917985202 1.329421278 0.889794777 0.06308726 0.072042093 1.507292685 0.018771805 0.029714989 1.30E-06 5.886117283 0.411436075 KT(ph)SDANETEDHLESLICK ddPTM_A459_MK2206_30min_R2 3 KTSDANETEDHLESLICK 18 1 F2Z2T1;Q09161 F2Z2T1 NCBP1 Nuclear cap-binding protein subunit 1 1 KT(0.368)S(0.368)DANET(0.264)EDHLESLICK;KT(0.48)S(0.48)DANET(0.041)EDHLESLICK;KT(0.405)S(0.405)DANET(0.189)EDHLESLICK 74.251 0.012585 240379000 637187 645132 566817 592595 427934 334466 423282 324357 290975 359892 TRUE FALSE 685970.5266 613095.683 585714.3959 544178.0929 411131.161 347194.338 367704.5649 366751.5736 316283.4795 348148.7535 1.970337448 1.761016453 1.682368212 1.563062017 1.1809066 0.997258599 1.05617085 1.053433539 0.908472245 1 18.40934433 -6.091726245 1.097680345 0.986303988 1.885950668 0.970010073 0.063479788 0.081122675 0.200769005 0.026639216 0.04849426 8.10E-07 6.091726245 0.899646681 KT(ph)SDFNTFLAQEGCTK ddPTM_A459_MK2206_30min_R2 1 KTSDFNTFLAQEGCTK 16 1 Q9UHD1;E9PHZ2;Q9UHD1-2 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 KT(0.499)S(0.499)DFNT(0.001)FLAQEGCTK 72.771 0.045487 3643200 32069 26444 23139 25387 27821 19914 34174 22726 19538 30032 TRUE FALSE 34524.2273 25130.82941 23910.44271 23312.80089 26728.60775 20671.84122 29686.91275 25696.36623 21237.37992 29052.0583 1.18835736 0.865027502 0.823020609 0.802449198 0.920024581 0.711544807 1.021852305 0.884493827 0.731011197 1 14.82635276 -4.761656984 6.910166409 0.857076482 1.195767949 0.50551844 0.096699848 0.087396384 23.29117911 0.022848451 0.139100892 1.73E-05 4.761656984 0.338691468 KT(ph)SEDQAAILPGK ddPTM_A459_MK2206_30min_R2 1 KTSEDQAAILPGK 13 1 H3BRS1;Q12968;I3L3K7;H3BR83;Q12968-5;Q12968-6;Q12968-4;Q12968-3;Q12968-2 H3BRS1 NFATC3 "Nuclear factor of activated T-cells, cytoplasmic 3" 1 KT(0.957)S(0.043)EDQAAILPGK 118.5 0.004256 5869700 166190 124920 120860 107670 86958 62994 93488 64045 49264 97065 TRUE FALSE 178913.6342 118716.6545 124889.4121 98873.01658 83543.59199 65391.28081 81212.9133 72415.9014 53548.89367 93897.777 1.905408625 1.264318051 1.330057176 1.052985701 0.889729178 0.696409254 0.864907732 0.771220616 0.570289259 1 16.51880338 -3.511135821 0.475870827 0.74105134 5.12070616 0.855116562 0.139803528 4.998326622 0.341186035 0.083023173 15.93803979 0.000308222 3.511135821 4.379654821 KT(ph)SPASLDFPESQK ddPTM_A459_MK2206_30min_R1 1 KTSPASLDFPESQK 14 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KT(0.474)S(0.474)PAS(0.051)LDFPESQK 103.99 0.0081137 63092000 5372.2 5259.1 5525.5 4806.8 4749.3 4729.3 5602.6 5467.6 5553.9 4879.9 TRUE FALSE 4915.266179 4916.731634 5150.444455 5177.020569 4560.125324 4997.068879 5228.860777 5419.79735 6131.24778 5484.458853 0.896217168 0.896484369 0.939098021 0.943943734 0.83146313 0.911132532 0.953395935 0.988210049 1.117931221 1 12.42113356 -7.791991556 2.038502662 1.056807252 0.904407431 0.686322869 0.041002704 0.185813777 1.504052308 0.029373525 0.011810644 1.61E-08 7.791991556 -0.152399821 KT(ph)T(ph)SY(ph)PTPR ddPTM_A459_MK2206_30min_R2 1 KTTSYPTPR 9 1 O95832 O95832 CLDN1 Claudin-1 3 KT(1)T(0.628)S(0.447)Y(0.923)PT(0.003)PR 85.924 0.011361 21870000 28960 34785 28612 31451 31011 30892 31281 27966 27091 34954 TRUE FALSE 31177.19987 33057.62748 29565.9098 28881.35269 29793.35232 32067.61671 27173.76712 31621.25222 29447.32621 33813.45384 0.922035353 0.977647171 0.874383017 0.854137907 0.881109409 0.948368565 0.803637725 0.93516777 0.870876023 1 15.04530977 -11.29377255 2.601887636 1.026247409 0.896368835 0.293868079 0.048190131 24304791.9 18169267.88 4075390.335 0.01220318 5.08E-12 11.29377255 -0.129878574 KT(ph)VFSPTLPAAR ddPTM_A459_MK2206_30min_R2 1 KTVFSPTLPAAR 12 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 KT(0.998)VFS(0.002)PT(0.001)LPAAR 89.992 0.031225 17940000 54896 73646 68610 82955 69997 61759 68288 58908 59544 71338 TRUE FALSE 59098.87997 69988.84673 70897.42316 76177.31114 67248.56607 64109.28202 59321.70357 66607.47786 64723.02949 69010.2469 0.85637833 1.0141805 1.027346319 1.103855073 0.974472185 0.92898207 0.859607178 0.965182431 0.93787564 1 16.07452297 -6.585928357 5.099019751 0.932148185 1.007355132 0.157561256 0.066064821 0.326272476 16.79247553 0.02269428 0.022835925 2.59E-07 6.585928357 0.075206947 KTAESVTSLPSQNNGT(ph)TSPDPFESQPLTVASSKPSSAR ddPTM_A459_MK2206_30min_R1 1 KTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSAR 38 2 I3L2B2;O95208-3;O95208-2;O95208;I3L356;I3L2H1;O95208-5 I3L2B2 EPN2 Epsin-2 1 KTAESVTSLPSQNNGT(0.333)T(0.333)S(0.333)PDPFESQPLTVASSKPSSAR 142.59 3.63E-35 19976000 4457.1 4684.9 4646.7 4544.5 5224.7 4538.7 4050.2 4481.5 3235.2 2676.3 TRUE FALSE 4078.00024 4379.912158 4331.29495 4894.518177 5016.589136 4795.677272 3780.018548 4442.318718 3571.510617 3007.860249 1.355781154 1.456155471 1.439992085 1.627242549 1.667826535 1.594381678 1.256713489 1.476903297 1.187392472 1 11.55452182 -8.402138673 1.008659704 0.998963432 1.514201935 0.662606577 0.116043359 0.337174369 0.746521309 0.117766351 0.039720715 3.96E-09 8.402138673 0.515238503 KTAPTLS(ph)PEHWK ddPTM_A459_MK2206_30min_R1 1 KTAPTLSPEHWK 12 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KT(0.001)APT(0.06)LS(0.939)PEHWK 116.96 0.0087692 11552000 3599.1 3365.9 4185.4 3158 3499.6 2938.2 3324.3 3118.8 2674.9 2481.5 TRUE FALSE 3292.977645 3146.779298 3901.306709 3401.229707 3360.203521 3104.558345 3102.542013 3091.53266 2952.965427 2788.926954 1.180732841 1.128311838 1.398855823 1.219547791 1.204837408 1.113173057 1.11245008 1.108502557 1.058817773 1 11.44549443 KTAS(ph)PEDSDMPDHDLEPPR ddPTM_A459_MK2206_30min_R1 1 KTASPEDSDMPDHDLEPPR 19 1 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 KT(0.297)AS(0.7)PEDS(0.003)DMPDHDLEPPR 80.868 0.019886 0 1066.7 1366.4 1102.9 917.56 1444.2 1421.1 1694.4 1251.2 1225.6 1096.9 TRUE FALSE 975.9715635 1277.447112 1028.038221 988.2306302 1386.674456 1501.561454 1581.369668 1240.26089 1353.005506 1232.792253 0.791675614 1.036222533 0.833910351 0.80161976 1.124824116 1.21801662 1.282754384 1.00605831 1.097512985 1 10.26771399 -6.273750486 23.74609097 1.134716464 0.875744125 0.596611779 0.102519692 275.3491624 531101.7679 0.032650631 0.037321455 5.32E-07 6.273750486 -0.258972339 KTAS(ph)PEDSDMPDHDLEPPR ddPTM_A459_MK2206_30min_R2 1 KTASPEDSDMPDHDLEPPR 19 1 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 KT(0.372)AS(0.628)PEDS(0.001)DMPDHDLEPPR 111.24 0.00031934 8759000 20288 28561 24846 32763 33199 46379 32054 20495 26946 29313 TRUE FALSE 21841.26488 27142.70227 25674.35324 30086.1581 31895.44045 48143.98534 27845.2713 23173.76687 29289.71437 28356.51921 0.770237867 0.957194431 0.905412722 1.060996164 1.124800975 1.697810122 0.98197071 0.817228895 1.032909369 1 14.79139283 -5.78956181 2.545757203 1.121561593 0.873533771 0.182188363 0.220119857 0.533116797 7.04494778 0.071635415 0.12736107 1.62E-06 5.78956181 -0.248027822 KTDDVEAMSS(ph)QPALALDER ddPTM_A459_MK2206_30min_R1 1 KTDDVEAMSSQPALALDER 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KTDDVEAMS(0.035)S(0.965)QPALALDER 128.97 0.00016289 7427100 1601.2 2174.7 1904.9 1684.9 1601.5 1587 1779.4 1782.9 1390.3 1319.5 TRUE FALSE 1465.009532 2033.126635 1775.600695 1814.67129 1537.708864 1676.854569 1660.699473 1767.312293 1534.82666 1482.969622 0.987889105 1.370983333 1.19732776 1.223673947 1.036911911 1.13074101 1.119847263 1.191738703 1.034968375 1 10.53427333 -6.245185221 24.41431023 1.099247437 1.207709548 0.206820142 0.101577757 955.0825417 1434566.262 0.0285967 0.036791273 5.69E-07 6.245185221 0.108462111 KTDDVEAMSSQPALALDER ddPTM_A459_MK2206_30min_R2 1 KTDDVEAMSSQPALALDER 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 115.88 0.0020162 0 20278 19783 27162 24424 27453 21994 25766 19861 20088 27037 FALSE TRUE 21830.49927 18800.60499 28067.56752 22428.48107 26375.05728 22830.99708 22382.89325 22456.90089 21835.21793 26154.7849 0.834665601 0.71882086 1.073133181 0.857528791 1.008421877 0.872918556 0.85578579 0.858615392 0.834846014 1 14.67478728 -5.226613839 24.99986657 0.912036463 0.776743223 0.328573569 0.081343428 731.5802984 525170.1807 0.020179686 0.053384573 5.93E-06 5.226613839 -0.135293241 KTEAELSQDLETS(ph)PTAKPQIK ddPTM_A459_MK2206_30min_R2 1 KTEAELSQDLETSPTAKPQIK 21 2 Q5VT06;H0Y7F7 Q5VT06 CEP350 Centrosome-associated protein 350 1 KT(0.001)EAELS(0.001)QDLET(0.078)S(0.723)PT(0.196)AKPQIK 44.254 0.040724 5835200 20687 37271 30665 33228 35665 23843 36747 24385 26417 34189 TRUE FALSE 22270.81263 35420.17634 31687.35579 30513.16611 34264.6129 24750.36207 31922.07476 27572.20323 28714.70291 33073.41573 0.67337504 1.0709561 0.958091419 0.922588896 1.036016757 0.748346112 0.965188326 0.833666636 0.868210987 1 15.01338443 -6.740253703 24.99966617 0.877818072 0.940817773 0.038079683 0.11811934 735.3078279 867680.8138 0.036953041 0.036919179 1.82E-07 6.740253703 0.062999701 KTGS(ph)YGALAEITASK ddPTM_A459_MK2206_30min_R1 1 KTGSYGALAEITASK 15 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 KT(0.216)GS(0.783)Y(0.001)GALAEITASK 75.334 0.019957 402990000 3903.1 8596.3 4138.5 4841 4656.2 3609.1 3583.9 4024.9 3312.2 2895.6 TRUE FALSE 3571.120849 8036.679308 3857.590151 5213.854659 4470.733694 3813.444123 3344.82457 3989.710724 3656.515043 3254.328789 1.097344823 2.469535142 1.185371977 1.60212904 1.373780581 1.171806652 1.027807818 1.225970387 1.123585009 1 11.6681443 -6.297811689 0.992413462 1.096478891 1.71113714 0.292268721 0.34972663 0.641986926 1.340708765 0.15567126 0.233461653 5.04E-07 6.297811689 0.61465825 KTGS(ph)YGALAEITASK ddPTM_A459_MK2206_30min_R2 1 KTGSYGALAEITASK 15 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 KT(0.011)GS(0.989)YGALAEITASK 100.69 0.013339 87456000 66723 102980 74576 118920 110100 104630 101950 70112 74876 95522 TRUE FALSE 71831.36418 97866.16295 77062.32662 109203.8556 105776.9208 108611.768 88563.84254 79275.87913 81388.57914 92405.12496 0.7773526 1.059098865 0.833961608 1.181794361 1.144708379 1.175386841 0.958429985 0.857916476 0.880779926 1 16.49568525 -10.44339546 4.270631903 1.000000129 0.994693636 0 0.141555805 1.85E-07 4.69E-08 0.14464281 0.035080173 3.60E-11 10.44339546 -0.005306493 KTGSPGS(ph)PGAGGVQSTAK ddPTM_A459_MK2206_30min_R1 2 KTGSPGSPGAGGVQSTAK 18 1 O43237-2;O43237;J3KRZ2;J3KRI4 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 KT(0.003)GS(0.056)PGS(0.941)PGAGGVQSTAK;KTGSPGS(1)PGAGGVQSTAK 145.83 0.00013339 31022000 14623.7 11080.4 12021.9 11077.1 11646.2 9053.8 9971.3 11067.6 7977.9 6658.7 TRUE FALSE 13379.87752 10359.06395 11205.88692 11930.26016 11182.30719 9566.418332 9306.132771 10970.83714 8807.231254 7483.630027 1.787886023 1.384229834 1.497386547 1.594180915 1.494235706 1.27831257 1.243531914 1.465978021 1.176866203 1 12.86952252 -1.522878746 0.04641323 0.052750756 3.77966347 0.701403998 0.117148235 335.067426 1.182278774 23.63714998 92.16688119 0.03 1.522878746 3.726912714 KTGSPGS(ph)PGAGGVQSTAK ddPTM_A459_MK2206_30min_R2 3 KTGSPGSPGAGGVQSTAK 18 1 O43237-2;O43237;J3KRZ2;J3KRI4 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 KT(0.003)GS(0.003)PGS(0.994)PGAGGVQSTAK;KT(0.037)GS(0.106)PGS(0.857)PGAGGVQSTAK;KT(0.289)GS(0.289)PGS(0.422)PGAGGVQSTAK 120.33 0.00049065 33309800 94423 108335 89507 102355 125895 101033 90324 72543 103370 97687 TRUE FALSE 101652.0975 102955.2414 92491.11871 93992.26908 120951.7297 104877.8816 78464.3503 82024.61918 112360.9357 94499.48119 1.075689477 1.089479436 0.97874737 0.994632647 1.279919511 1.109824946 0.830315144 0.867990153 1.189011139 1 16.52801879 -7.217209251 24.969358 0.960828113 1.087620896 0.188605608 0.11720594 734.421174 414605.1293 0.04647946 0.036002646 6.06E-08 7.217209251 0.126792783 KTGSYGALAEIT(ph)ASK ddPTM_A459_MK2206_30min_R1 1 KTGSYGALAEITASK 15 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 KTGS(0.002)YGALAEIT(0.998)ASK 146.27 0.044285 108460000 5857.4 6285.1 6844.6 5626.2 6694.1 5491.4 5511.6 6347.2 5545.4 3863.3 TRUE FALSE 5359.197372 5875.938848 6380.007622 6059.530899 6427.459822 5802.318322 5143.93122 6291.7071 6121.864174 4341.91477 1.234293544 1.353305893 1.469399553 1.395589554 1.480328418 1.33635012 1.184714922 1.449062783 1.409945726 1 12.08411569 -6.99575256 24.8410304 1.292949861 1.391686229 0.149457216 0.132571204 263.489191 1540995.029 0.046422454 0.040766749 1.01E-07 6.99575256 0.098736368 KTGSYGALAEIT(ph)ASK ddPTM_A459_MK2206_30min_R2 1 KTGSYGALAEITASK 15 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 KTGS(0.219)YGALAEIT(0.603)AS(0.177)K 179.55 0.0025546 84451000 187430 242230 185690 235160 228880 184570 230760 169760 194020 182220 TRUE FALSE 201779.7849 230201.2104 191880.8119 215946.6758 219893.0212 191593.9407 200460.9348 191948.2149 210895.5089 176274.1763 1.144692825 1.305927024 1.088536143 1.225061324 1.247448865 1.086908728 1.137211014 1.088918518 1.196406151 1 17.42746161 -6.769654647 24.99765146 1.109653913 1.203029059 0.329031427 0.07128458 230.1583179 700328.237 0.023636224 0.021201337 1.70E-07 6.769654647 0.093375146 KTGSYGALAEITAS(ph)K ddPTM_A459_MK2206_30min_R1 1 KTGSYGALAEITASK 15 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 KTGS(0.001)YGALAEIT(0.016)AS(0.983)K 129.88 0.0015183 173220000 2147.6 2337.4 2107 1890.7 2715.1 1802.2 1642.5 2036.3 1694.1 1622.9 TRUE FALSE 1964.935343 2185.234835 1963.98271 2036.322042 2606.951818 1904.239007 1532.931822 2018.496844 1870.207757 1823.957104 1.077292519 1.19807359 1.07677023 1.116430884 1.429283513 1.044015236 0.840442913 1.106658067 1.025357314 1 10.83285609 -6.983076055 24.99455215 0.993463586 1.177906296 0.389441326 0.111810706 256.9706525 379512.3393 0.039856667 0.035142369 1.04E-07 6.983076055 0.184442709 KTLPLTTAPEAGEVTPSDSGGQEDS(ph)PAK ddPTM_A459_MK2206_30min_R2 1 KTLPLTTAPEAGEVTPSDSGGQEDSPAK 28 1 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y8P9 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KTLPLTTAPEAGEVTPS(0.038)DS(0.232)GGQEDS(0.73)PAK 99.603 3.84E-07 4237000 20994 20549 22732 19730 18011 11901 25103 15770 14118 21997 TRUE FALSE 22601.31678 19528.56654 23489.87353 18117.99589 17303.79764 12353.90089 21806.94595 17831.19315 15345.95812 21279.23969 1.062129903 0.917728585 1.103886881 0.851440002 0.813177439 0.580561198 1.024799112 0.837961948 0.721170415 1 14.37715898 -5.876421736 6.327162263 0.820187262 1.015892433 0.329110437 0.127089678 0.245282725 12.62693379 0.035480773 0.053175608 1.33E-06 5.876421736 0.195705171 KTPES(ph)FLGPNAALVDLDSLVSR ddPTM_A459_MK2206_30min_R2 1 KTPESFLGPNAALVDLDSLVSR 22 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 KT(0.465)PES(0.535)FLGPNAALVDLDSLVSR 68.401 0.0026922 8880500 19332 12464 14275 18141 17303 13766 24965 25931 14459 28699 TRUE FALSE 20812.07278 11845.05588 14750.92138 16658.82227 16623.59728 14289.87478 21687.06551 29320.27073 15716.61768 27762.55398 0.749645468 0.426655843 0.531324365 0.600046461 0.598777666 0.514717586 0.78116248 1.056108554 0.566108496 1 14.76085267 -7.39327095 4.530131347 0.86821869 0.565384362 0.486711357 0.143010193 0.187948664 6.071377483 0.058825388 0.038498662 4.04E-08 7.39327095 -0.302834328 KTPESFLGPNAALVDLDSLVSRPGPT(ph)PPGAK ddPTM_A459_MK2206_30min_R1 1 KTPESFLGPNAALVDLDSLVSRPGPTPPGAK 31 2 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 KTPESFLGPNAALVDLDS(0.216)LVS(0.216)RPGPT(0.569)PPGAK 96.41 6.31E-08 4428900 4995.2 5257 5327.6 4532.3 5106.7 4273.9 4650 5414.4 4737.8 4113.8 TRUE FALSE 4570.332009 4914.768344 4965.977356 4881.378531 4903.289325 4515.884525 4339.806984 5367.062472 5230.311264 4623.448602 0.988511478 1.063009188 1.074085122 1.055787347 1.060526405 0.976735098 0.938651504 1.160835328 1.131257577 1 12.17475364 -7.778231908 24.99999822 1.109534814 1.027002349 0.256827323 0.05690471 326.5592748 486160.5894 0.031792249 0.015338108 1.67E-08 7.778231908 -0.082532465 KTPLALAGS(ph)PTPK ddPTM_A459_MK2206_30min_R2 2 KTPLALAGSPTPK 13 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 KT(0.001)PLALAGS(0.675)PT(0.324)PK;KTPLALAGS(0.895)PT(0.105)PK 71.592 0.029469 76684000 244462 251404 218462 229055 237293 194516 273542 223819 194617 268484 TRUE FALSE 263178.1987 238919.6429 225745.414 210340.4738 227975.6845 201918.4427 237625.6068 253072.9118 211544.4349 259723.3891 1.013301881 0.919900375 0.869176299 0.809863426 0.877763398 0.7774365 0.914918012 0.974393999 0.814498978 1 17.98661641 -10.13205871 11.45614771 0.999999985 0.884039819 0.192972185 0.070053302 0 0 0.069694786 0.016903468 7.38E-11 10.13205871 -0.115960165 KTQMAEVLPS(ph)PR ddPTM_A459_MK2206_30min_R1 2 KTQMAEVLPSPR 12 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR 97.767 0.0081628 106298000 7262.5 7876.7 6154.6 6528.7 7046 8019.7 7459.1 6457 5835.9 6006 TRUE FALSE 6644.786238 7363.925398 5736.8429 7031.541605 6765.3429 8473.768484 6961.517049 6400.54713 6442.562689 6750.068623 0.984402768 1.09094082 0.849894011 1.041699277 1.002262833 1.255360346 1.031325374 0.948219564 0.954444028 1 12.72068645 -4.48075585 17.48981855 1.021369019 0.782796014 0.010496201 0.100079859 10391055.72 115103286.8 0.025917295 82115645.59 3.31E-05 4.48075585 -0.238573004 KTQMAEVLPS(ph)PR ddPTM_A459_MK2206_30min_R2 3 KTQMAEVLPSPR 12 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR 80.488 0.020559 73153000 107750 122545 104804 144388 118602 130017 151463 97746 84001 116675 TRUE FALSE 115999.4228 116459.5935 108298.1131 132591.0385 113945.0896 134964.888 131575.7262 110521.7378 91307.25514 112867.9043 1.027744987 1.03182206 0.959512039 1.174745286 1.009543769 1.19577739 1.165749705 0.979213165 0.808974488 1 16.78427577 -7.987784067 8.858777837 0.90084846 1.079101367 0.416309475 0.085180132 0.145479607 84.15429315 0.048717077 0.02257141 1.03E-08 7.987784067 0.178252907 KTS(ph)ASDVTNIYPGDAGK ddPTM_A459_MK2206_30min_R2 2 KTSASDVTNIYPGDAGK 17 1 Q15042-4;Q15042;Q15042-3 Q15042-4 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit 1 KT(0.065)S(0.918)AS(0.017)DVTNIYPGDAGK;KT(0.208)S(0.779)AS(0.012)DVTNIYPGDAGK 222.11 7.68E-12 10175400 129958 134147 120555 113711 108016 83286 91636 66506 67633 77043 TRUE FALSE 139907.6844 127485.455 124574.2435 104420.4476 103774.7491 86455.50709 79604.08313 75198.56255 73515.59609 74529.09322 1.877222416 1.710546171 1.671484761 1.40106961 1.3924059 1.160023601 1.068094078 1.008982658 0.986401322 1 16.18551609 -6.05864694 0.572302058 0.957471504 1.954604761 0.978614143 0.046181616 0.148874497 0.091948123 0.031444576 0.083187643 8.74E-07 6.05864694 0.997133256 KTS(ph)AVSSPLLDQQR ddPTM_A459_MK2206_30min_R1 1 KTSAVSSPLLDQQR 14 1 Q5T200;A0A087WX14;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KT(0.002)S(0.559)AVS(0.094)S(0.345)PLLDQQR 180.95 0.00013344 3837900 1331.8 1403 1171.6 1403.8 1343.8 1006.5 1226 1351.7 1056.9 796.12 TRUE FALSE 1218.523416 1311.664445 1092.075056 1511.920919 1290.2736 1063.48716 1144.215777 1339.882229 1166.768537 894.749356 1.361860065 1.465957406 1.220537404 1.689770335 1.442050326 1.188586673 1.278811512 1.497494489 1.304017186 1 9.80533979 -6.734990592 23.99297206 1.286439742 1.439821899 0.234199087 0.159329915 251.7204169 228346.5453 0.052296512 0.052277626 1.84E-07 6.734990592 0.153382157 KTS(ph)DANETEDHLESLICK ddPTM_A459_MK2206_30min_R1 1 KTSDANETEDHLESLICK 18 1 F2Z2T1;Q09161 F2Z2T1 NCBP1 Nuclear cap-binding protein subunit 1 1 KT(0.168)S(0.573)DANET(0.26)EDHLESLICK 92.427 0.0034336 16591000 13377 13471 12917 8714.5 8415.6 6785.6 7872.4 8020 7978.2 7810.8 TRUE FALSE 12239.2159 12594.03545 12040.23003 9385.6923 8080.388832 7169.794808 7347.24656 7949.881986 8807.56244 8778.460873 1.394232552 1.434651887 1.371565039 1.069172881 0.920478994 0.816748507 0.836962956 0.905612282 1.00331511 1 13.0997523 -5.875974236 2.305384709 0.900462979 1.419988276 0.934123192 0.057731381 0.068957269 0.745534571 0.018751871 0.031882156 1.33E-06 5.875974236 0.519525297 KTS(ph)DFNTFLAQEGCTK ddPTM_A459_MK2206_30min_R2 1 KTSDFNTFLAQEGCTK 16 1 Q9UHD1;E9PHZ2;Q9UHD1-2 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 KT(0.196)S(0.802)DFNT(0.002)FLAQEGCTK 69.255 0.023456 4283800 15089 15146 13848 15450 15997 12918 18068 14654 12518 16219 TRUE FALSE 16244.22544 14393.87166 14309.68541 14187.68558 15368.8774 13409.60354 15695.6499 16569.32811 13606.79301 15689.77536 1.035338306 0.917404573 0.912038897 0.904263143 0.97954732 0.854671481 1.000374418 1.056058977 0.867239505 1 13.93753708 KTS(ph)EDQAAILPGK ddPTM_A459_MK2206_30min_R2 1 KTSEDQAAILPGK 13 1 H3BRS1;Q12968;I3L3K7;H3BR83;Q12968-5;Q12968-6;Q12968-4;Q12968-3;Q12968-2 H3BRS1 NFATC3 "Nuclear factor of activated T-cells, cytoplasmic 3" 1 KT(0.315)S(0.685)EDQAAILPGK 97.823 0.006703 7244800 137670 122800 114000 93665 79814 62903 79875 65135 48146 71528 TRUE FALSE 148210.1211 116701.9306 117800.7031 86012.26988 76680.10133 65296.81774 69387.31655 73648.36814 52333.65205 69194.04722 2.141949012 1.686589169 1.70246875 1.243058808 1.108189279 0.94367681 1.00279315 1.064374337 0.75633171 1 16.07836031 -5.408414435 0.723714243 0.926396772 2.306102136 0.931110552 0.108359777 0.333282048 0.232040992 0.049122234 0.328716183 3.90E-06 5.408414435 1.379705364 up KTS(ph)PASLDFPESQK ddPTM_A459_MK2206_30min_R1 2 KTSPASLDFPESQK 14 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KT(0.028)S(0.945)PAS(0.028)LDFPESQK;KTS(0.771)PAS(0.228)LDFPES(0.001)QK 204.67 3.77E-05 77436000 11736.8 11893.6 13495.5 10649.6 10488.4 9877.6 11834.4 11887.8 12574.6 11929.7 TRUE FALSE 10738.52353 11119.32448 12579.46306 11469.83404 10070.62482 10436.86118 11044.94877 11783.86622 13881.77467 13407.6413 0.800925628 0.829327413 0.938230877 0.855469935 0.751110847 0.778426342 0.823780151 0.878891817 1.035362922 1 13.71076784 -8.131453509 3.328206865 1.018467756 0.827088526 0.713031935 0.047993376 0.152557287 2.978128213 0.043223055 0.014190085 7.39E-09 8.131453509 -0.19137923 KTS(ph)PASLDFPESQK ddPTM_A459_MK2206_30min_R2 4 KTSPASLDFPESQK 14 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KT(0.265)S(0.7)PAS(0.034)LDFPES(0.002)QK;KT(0.024)S(0.974)PAS(0.002)LDFPESQK;KT(0.001)S(0.968)PAS(0.031)LDFPESQK;KT(0.001)S(0.536)PAS(0.462)LDFPES(0.001)QK 195.5 0.00022461 240949000 409375 416754 403588 426288 423881 324737 558334 428479 375945 500485 TRUE FALSE 440717.0648 396058.6024 417043.4225 391458.9068 407237.3021 337095.0941 485024.0751 484482.6765 408644.0165 484154.2154 0.910282407 0.818042247 0.861385503 0.808541771 0.841131377 0.696255621 1.001796658 1.000678422 0.844036886 1 18.88510713 -7.287829507 24.99925226 0.961684538 0.824364422 0.512104125 0.066463786 641.5220706 607708.1681 0.027332243 0.018433902 5.15E-08 7.287829507 -0.137320116 KTS(ph)QSEEEEAPR ddPTM_A459_MK2206_30min_R1 4 KTSQSEEEEAPR 12 1 Q7RTP6;A0A5F9ZHV5;J3KSK6;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 KT(0.011)S(0.987)QS(0.002)EEEEAPR;KT(0.09)S(0.909)QS(0.001)EEEEAPR;KT(0.077)S(0.916)QS(0.007)EEEEAPR;KT(0.007)S(0.993)QS(0.001)EEEEAPR 217.46 8.58E-08 46599000 11163.1 11306.3 11366.1 8723.17 8394.2 7512.59 7610.36 7346.62 6138.52 6261.46 TRUE FALSE 10213.61973 10570.25781 10594.6008 9395.030065 8059.841239 7937.946354 7102.68677 7282.389276 6776.641121 7037.176936 1.451380265 1.502059407 1.505518604 1.335056678 1.145323091 1.12800153 1.009309107 1.034845271 0.962977225 1 12.78078107 -6.297942766 1.15040244 1.006753845 1.505983512 0.96926615 0.036498812 0.075658464 0.207534499 0.015928438 0.022721233 5.04E-07 6.297942766 0.499229667 KTS(ph)QSEEEEAPR ddPTM_A459_MK2206_30min_R2 4 KTSQSEEEEAPR 12 1 Q7RTP6;A0A5F9ZHV5;J3KSK6;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 KT(0.216)S(0.783)QS(0.001)EEEEAPR;KT(0.083)S(0.916)QS(0.002)EEEEAPR;KT(0.399)S(0.465)QS(0.136)EEEEAPR;KT(0.033)S(0.965)QS(0.001)EEEEAPR 175.6 0.00018578 41956400 93595.6 96012.7 84475.7 90114 92042.6 67725.3 85033.1 63253.4 57370.1 74877.6 TRUE FALSE 100761.3511 91244.84893 87292.07768 82751.39794 88428.54505 70302.63375 73868.15183 71520.83656 62360.0476 72434.35004 1.391071378 1.259690311 1.205119914 1.142433084 1.220809533 0.970570368 1.019794501 0.987388394 0.860918163 1 16.1443864 -5.946304773 0.475873267 0.924937199 1.426514964 0.832308572 0.063487472 0.6843065 0.255031331 0.051716767 0.173183153 1.13E-06 5.946304773 0.501577766 KTS(ph)SVSSISQVSPER ddPTM_A459_MK2206_30min_R1 1 KTSSVSSISQVSPER 15 1 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 KT(0.214)S(0.669)S(0.11)VS(0.004)S(0.004)ISQVSPER 120.99 0.0044261 0 1764.2 1775.8 1513.7 1329.1 1855.1 1845.6 2057.9 1439.2 1385.4 1897.1 TRUE FALSE 1614.145526 1660.195097 1410.954261 1431.467512 1781.207439 1950.096277 1920.621246 1426.617226 1529.417288 2132.12707 0.757058783 0.778656732 0.661758992 0.671380019 0.83541336 0.914624791 0.900800554 0.669105161 0.717319952 1 11.05807771 -6.275534286 23.4016279 0.829816114 0.717641381 0.281434788 0.094999026 531.2996003 882108.6033 0.031323149 0.035725509 5.30E-07 6.275534286 -0.112174733 KTS(ph)SVSSISQVSPER ddPTM_A459_MK2206_30min_R2 1 KTSSVSSISQVSPER 15 1 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 KT(0.175)S(0.814)S(0.01)VS(0.001)SISQVSPER 82.59 0.045067 6299900 17283 24808 24597 31211 30813 25845 29130 16965 23842 30598 TRUE FALSE 18606.19977 23576.07079 25417.0517 28660.96146 29603.1268 26828.54959 25305.19601 19182.38375 25915.73406 29599.58977 0.628596542 0.796499917 0.85869608 0.968289145 1.000119496 0.90638248 0.854917119 0.648062487 0.875543691 1 14.85328956 -4.798197766 2.019791852 0.882693027 0.560921537 0.409936826 0.095783276 0.814622889 3.77872561 0.028409846 0.485997659 1.59E-05 4.798197766 -0.32177149 KTSAS(ph)DVTNIYPGDAGK ddPTM_A459_MK2206_30min_R2 1 KTSASDVTNIYPGDAGK 17 1 Q15042-4;Q15042;Q15042-3 Q15042-4 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit 1 KT(0.081)S(0.265)AS(0.618)DVT(0.036)NIYPGDAGK 158.14 6.76E-05 6928800 62783 78031 62841 61417 53218 36167 45312 32391 31504 37937 TRUE FALSE 67589.71475 74156.09401 64936.08758 56399.03464 51128.39392 37543.36053 39362.47997 36624.61491 34244.16097 36699.1188 1.841725823 2.020650534 1.769418169 1.536795337 1.3931777 1.023004414 1.072572892 0.997969873 0.93310581 1 15.1634578 -6.219132341 0.966342083 0.972759982 1.962892853 0.967403096 0.070101458 0.086243585 0.169778638 0.031560647 0.052399141 6.04E-07 6.219132341 0.990132871 KTSAVS(ph)SPLLDQQR ddPTM_A459_MK2206_30min_R1 1 KTSAVSSPLLDQQR 14 1 Q5T200;A0A087WX14;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KTS(0.001)AVS(0.5)S(0.5)PLLDQQR 139.21 0.0010281 3813800 1943.2 2071.9 1861.9 1788.7 2171.5 1965.5 1818.4 2197.9 1570.1 1215.2 TRUE FALSE 1777.920636 1937.018933 1735.519416 1926.465984 2085.004557 2076.784911 1697.097854 2178.683992 1733.317514 1365.74815 1.301792454 1.418284135 1.270746305 1.410557271 1.526639122 1.520620702 1.24261406 1.59523115 1.269134074 1 10.41547575 -8.53498543 23.27694055 0.999999995 1.409790084 0.570165077 0.1092441 522.9580911 1005467.006 0.103044832 0.026606061 2.92E-09 8.53498543 0.409790089 KTSAVS(ph)SPLLDQQR ddPTM_A459_MK2206_30min_R2 2 KTSAVSSPLLDQQR 14 1 Q5T200;A0A087WX14;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KT(0.002)S(0.233)AVS(0.383)S(0.383)PLLDQQR;KT(0.001)SAVS(0.499)S(0.499)PLLDQQR 209.23 9.61E-06 21049600 28923 49911 42311 52432 51822 51978 51189 45131 53716 40805 TRUE FALSE 31137.36712 47432.49232 43721.62762 48148.13788 49787.2079 53956.05921 44467.82281 51029.77666 58388.12058 39473.53619 0.788816258 1.201627645 1.10761872 1.2197574 1.261280663 1.366891959 1.126522402 1.29275919 1.479171268 1 15.26859815 -4.29573487 1.211394113 1.25419015 5.48E-28 0.501063498 0.13007813 3.456953494 1.940924947 0.037461566 7.25442305 5.06E-05 4.29573487 -1.25419015 KTSAVSS(ph)PLLDQQR ddPTM_A459_MK2206_30min_R1 2 KTSAVSSPLLDQQR 14 1 Q5T200;A0A087WX14;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KTSAVS(0.226)S(0.774)PLLDQQR;KTSAVS(0.029)S(0.971)PLLDQQR 254.72 8.89E-28 34597000 6189 5938.6 5663 5625.4 6441 5719.1 5840 5990.6 4799.4 3394.8 TRUE FALSE 5662.59305 5551.996061 5278.611338 6058.669283 6184.441331 6042.9105 5450.424256 5938.224816 5298.314805 3815.373453 1.484151714 1.455164515 1.383511051 1.587962321 1.620926865 1.583831982 1.428542795 1.556394122 1.388675282 1 11.89760856 -8.686379804 3.013497509 1.000061592 1.511597136 0.818377584 0.07254985 0.330458933 5.276307547 0.076056596 0.020225143 2.06E-09 8.686379804 0.511535544 KTSDANET(ph)EDHLESLICK ddPTM_A459_MK2206_30min_R1 1 KTSDANETEDHLESLICK 18 1 F2Z2T1;Q09161 F2Z2T1 NCBP1 Nuclear cap-binding protein subunit 1 1 KT(0.048)S(0.271)DANET(0.682)EDHLESLICK 77.506 0.0076124 98307000 10000 10302 11319 7441.2 7273.9 5329.5 7054.5 5695.3 6774.3 6779.2 TRUE FALSE 9149.447488 9631.337928 10550.69782 8014.322513 6984.16516 5631.251684 6583.907177 5645.506593 7478.512727 7619.058476 1.200863272 1.264111302 1.384777115 1.051878331 0.916670371 0.73910073 0.864136586 0.740971684 0.981553397 1 12.89539701 -6.055842282 2.672775451 0.851758377 1.280108251 0.7867295 0.094606968 0.113153748 1.600794932 0.028523297 0.041205443 8.79E-07 6.055842282 0.428349874 KTSDANET(ph)EDHLESLICK ddPTM_A459_MK2206_30min_R2 1 KTSDANETEDHLESLICK 18 1 F2Z2T1;Q09161 F2Z2T1 NCBP1 Nuclear cap-binding protein subunit 1 1 KT(0.035)S(0.096)DANET(0.869)EDHLESLICK 72.927 0.023528 12166000 80978 75909 70250 66194 60971 42749 53720 36296 31629 42283 TRUE FALSE 87177.73794 72139.46944 72592.09994 60785.73846 58576.97219 44375.84315 46666.49947 41040.01182 34380.03325 40903.30917 2.131312593 1.763658513 1.774724378 1.486083637 1.432083941 1.084896162 1.140897898 1.003342093 0.840519604 1 15.31992994 -5.847246975 0.500646413 0.899265247 2.271757468 0.948164586 0.091097299 0.34324983 0.137121252 0.066974663 0.249304703 1.42E-06 5.847246975 1.372492221 up KTSFDQDS(ph)DVDIFPSDFPTEPPSLPR ddPTM_A459_MK2206_30min_R1 4 KTSFDQDSDVDIFPSDFPTEPPSLPR 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KT(0.012)S(0.005)FDQDS(0.984)DVDIFPSDFPTEPPSLPR;KT(0.016)S(0.007)FDQDS(0.97)DVDIFPS(0.007)DFPTEPPSLPR;KT(0.004)S(0.001)FDQDS(0.995)DVDIFPSDFPTEPPSLPR;KT(0.119)S(0.036)FDQDS(0.845)DVDIFPSDFPTEPPSLPR 133.15 2.68E-09 88249900 32732.5 37482.2 37261.4 34558.9 32942.6 30310.7 31980.2 30939.4 28502.2 24417 TRUE FALSE 29948.42899 35042.10197 34732.19998 37220.63247 31630.42648 32026.86564 29846.85921 30668.90009 31465.10569 27441.9623 1.091337007 1.276953214 1.265660218 1.356340048 1.152629908 1.167076366 1.087635749 1.117591364 1.146605529 1 14.74409603 -6.697030628 2.135279602 1.102757496 1.249412954 0.4467528 0.074619247 0.298778334 2.796411946 0.028625852 0.027502766 2.01E-07 6.697030628 0.146655458 KTSFDQDS(ph)DVDIFPSDFPTEPPSLPR ddPTM_A459_MK2206_30min_R2 5 KTSFDQDSDVDIFPSDFPTEPPSLPR 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KT(0.051)S(0.051)FDQDS(0.897)DVDIFPSDFPTEPPSLPR;KT(0.054)S(0.018)FDQDS(0.929)DVDIFPSDFPTEPPSLPR;KT(0.093)S(0.026)FDQDS(0.881)DVDIFPSDFPTEPPSLPR;KT(0.005)S(0.002)FDQDS(0.993)DVDIFPSDFPTEPPSLPR;KT(0.012)S(0.007)FDQDS(0.981)DVDIFPSDFPTEPPSLPR 103.94 1.52E-07 62771600 168320 214779 184287 232982 196828 176482 227745 182615 164731 198267 TRUE FALSE 181206.7086 204113.3872 190431.0366 213946.6253 189099.5437 183198.1462 197841.8079 206483.4075 179059.0046 191797.564 0.944781074 1.064212615 0.992875158 1.115481453 0.985932979 0.955164092 1.031513664 1.0765695 0.93358331 1 17.54922487 KTSS(ph)VSSISQVSPER ddPTM_A459_MK2206_30min_R2 1 KTSSVSSISQVSPER 15 1 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 KT(0.028)S(0.381)S(0.565)VS(0.02)S(0.006)ISQVSPER 64.298 0.035575 10935000 10401 13631 14649 14248 13920 10544 15181 11022 8813.1 10219 TRUE FALSE 11197.30856 12954.10436 15137.39035 13083.89282 13373.43086 10945.25931 13187.71646 12462.61324 9579.647508 9885.554867 1.132693987 1.310407411 1.531263602 1.323536514 1.352825515 1.107197265 1.334039074 1.2606893 0.969055115 1 13.27110623 -8.218358479 4.465006432 0.98028473 1.30307057 0.552597162 0.111589117 0.152802964 6.778042711 0.091657888 0.030128286 6.05E-09 8.218358479 0.32278584 KTTEEQVQAS(ph)TPCPR ddPTM_A459_MK2206_30min_R2 1 KTTEEQVQASTPCPR 15 1 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 KTTEEQVQAS(0.5)T(0.5)PCPR 57.794 0.04801 4448100 26787 36093 26748 35753 32001 33515 31930 28059 28064 27265 TRUE FALSE 28837.83332 34300.6741 27639.76497 32831.86553 30744.47995 34790.43681 27737.55265 31726.40764 30504.95599 26375.34528 1.093363253 1.300482467 1.047939455 1.244793772 1.165652226 1.319051426 1.051646996 1.202881225 1.156570868 1 14.68690236 -9.69943116 0.656541456 0.988412513 1.184358651 0.260105277 0.089562188 8.709560515 3.658099747 0.345672231 0.031835625 2.00E-10 9.69943116 0.195946139 KTVEDEDQDS(ph)EEEKDNDSYIK ddPTM_A459_MK2206_30min_R2 2 KTVEDEDQDSEEEKDNDSYIK 21 2 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 KT(0.004)VEDEDQDS(0.996)EEEKDNDSYIK;KT(0.015)VEDEDQDS(0.93)EEEKDNDS(0.027)Y(0.027)IK 77.631 0.0029024 21417000 76347 59805 78801 56167.4 60444 26814.9 72867 48317 41851.3 76989 TRUE FALSE 82192.18502 56835.17066 81428.18601 51578.34375 58070.66485 27835.35981 63299.47537 54632.1978 45491.45042 74476.85524 1.103593657 0.763125275 1.09333545 0.692541912 0.779714244 0.373745101 0.849921431 0.73354598 0.610813256 1 16.18450454 -5.778608478 24.83115683 0.702407124 0.964328828 0.319421312 0.176151586 246.0840133 355903.2776 0.047406395 0.070513956 1.66E-06 5.778608478 0.261921704 KTVFS(ph)PTLPAAR ddPTM_A459_MK2206_30min_R2 1 KTVFSPTLPAAR 12 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 KT(0.244)VFS(0.732)PT(0.024)LPAAR 85.28 0.016158 16773000 30890 39830 39952 44701 37488 39841 47438 28706 33985 42386 TRUE FALSE 33254.96215 37852.10012 41283.97974 41048.78531 36016.03276 41357.17717 41209.33362 32457.97276 36940.95387 41002.94829 0.811038316 0.92315557 1.006853933 1.001117896 0.87837666 1.008639108 1.005033426 0.791600949 0.900934089 1 15.32344003 -10.19635905 10.13351782 0.999999961 0.929265511 0.075804978 0.077189734 0 0 0.077682648 0.01884081 6.36E-11 10.19635905 -0.07073445 KTVSLTPSPTTQVETPDLVDHDNTS(ph)PLFR ddPTM_A459_MK2206_30min_R1 1 KTVSLTPSPTTQVETPDLVDHDNTSPLFR 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 KTVSLTPSPTTQVETPDLVDHDNT(0.273)S(0.727)PLFR 95.926 1.20E-07 34375000 3919.4 3624.5 3844.6 3452.7 4576.1 4131.1 2848.2 3415.1 2169.4 1376.6 TRUE FALSE 3586.034448 3388.544391 3583.639264 3718.627552 4393.824247 4364.999312 2658.201775 3385.242141 2394.916893 1547.143601 2.31784202 2.190193845 2.316293886 2.403543892 2.839958905 2.821327839 1.718135132 2.188059427 1.547960313 1 10.59539139 -8.330840508 1.000082041 1.012219435 2.439922869 0.729100096 0.281199245 0.284706906 0.605763335 0.284527306 0.097362992 4.67E-09 8.330840508 1.427703435 KVAEPELMGT(ph)PDGTCYPPPPVPR ddPTM_A459_MK2206_30min_R1 1 KVAEPELMGTPDGTCYPPPPVPR 23 1 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KVAEPELMGT(0.983)PDGT(0.017)CYPPPPVPR 115.45 3.28E-05 0 863.74 688.43 644.28 610.32 814.27 658.19 665.48 750.57 473.84 387.52 TRUE FALSE 790.2743773 643.6130819 600.5480687 657.3269521 781.8359017 695.456149 621.0870434 744.0078456 523.0973637 435.5289032 1.814516491 1.477773523 1.378893718 1.509261377 1.795141254 1.596808257 1.426052413 1.708285811 1.20106234 1 8.766624654 -8.445593117 4.019049541 1.003573286 1.575690953 0.664027377 0.141744736 0.123728575 3.647816212 0.138958552 0.036482139 3.58E-09 8.445593117 0.572117666 KVAS(ph)DDDISEQDGEVNR ddPTM_A459_MK2206_30min_R2 1 KVASDDDISEQDGEVNR 17 1 Q5TF58;H0Y4W3 Q5TF58 IFFO2 Intermediate filament family orphan 2 1 KVAS(0.997)DDDIS(0.003)EQDGEVNR 52.365 0.047378 4022800 20451 20582 17859 19755 20552 18299 22321 16094 16241 18543 TRUE FALSE 22016.74428 19559.92781 18454.41015 18140.95331 19745.02521 18995.38127 19390.22589 18197.54106 17653.61282 17937.94343 1.227383974 1.090421981 1.028791858 1.011317344 1.100740745 1.058949781 1.080961481 1.014471984 0.984149208 1 14.13072688 -4.78173923 2.549491218 1.039685558 1.267768865 0.735804831 0.034789996 0.277447777 2.314812954 0.00953135 0.139260123 1.65E-05 4.78173923 0.228083307 KVAS(ph)PSPSGSVLFTDEGVPK ddPTM_A459_MK2206_30min_R1 1 KVASPSPSGSVLFTDEGVPK 20 1 P56181-2 P56181-2 NDUFV3 "NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial" 1 KVAS(0.828)PS(0.17)PS(0.001)GSVLFTDEGVPK 68.771 0.0066337 17941000 5417.3 5656.6 5189.2 5389.4 5347.2 4312.8 4823.5 5269.4 4794.6 3982 TRUE FALSE 4956.530188 5288.354312 4836.971562 5804.492522 5134.209701 4556.987009 4501.733116 5223.330191 5293.015828 4475.320223 1.107525259 1.181670595 1.080810159 1.29700049 1.147227337 1.018248255 1.0059019 1.167141105 1.1827122 1 12.1277752 -6.54570595 20.91725011 1.081140186 1.16923295 0.238832498 0.078751905 59.12927333 54179.54794 0.026865333 0.026870751 2.85E-07 6.54570595 0.088092764 KVAS(ph)PSPSGSVLFTDEGVPK ddPTM_A459_MK2206_30min_R2 1 KVASPSPSGSVLFTDEGVPK 20 1 P56181-2 P56181-2 NDUFV3 "NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial" 1 KVAS(0.95)PS(0.046)PS(0.003)GS(0.001)VLFTDEGVPK 68.639 0.0067137 7420200 61235 61795 67897 62827 51860 43268 56650 49866 64908 64090 TRUE FALSE 65923.19868 58726.35016 70160.65209 57693.83313 49823.71582 44914.59406 49211.78695 56383.65742 70553.58051 61998.74855 1.06329886 0.947218315 1.131646263 0.930564479 0.803624541 0.724443559 0.793754521 0.909432186 1.137983946 1 15.91995147 -5.967292302 8.903825071 0.875867318 1.036735157 0.242842904 0.117414672 0.395550308 98.65276225 0.035005164 0.051773342 1.08E-06 5.967292302 0.160867839 KVASGVLS(ph)PPPAAPPPSSSSVPEAGGPPIKK ddPTM_A459_MK2206_30min_R1 1 KVASGVLSPPPAAPPPSSSSVPEAGGPPIKK 31 2 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 KVAS(0.015)GVLS(0.985)PPPAAPPPSSSSVPEAGGPPIKK 104.5 3.90E-11 37920000 6256 5034.7 4512.2 4500.6 5279.5 4883.1 4668.4 5028 4070.7 3266.2 TRUE FALSE 5723.894348 4706.940115 4205.924436 4847.236992 5069.206335 5159.576902 4356.979554 4984.040726 4493.863832 3670.841515 1.559286699 1.282250976 1.145765738 1.320470244 1.380938489 1.405556977 1.186915735 1.357737921 1.224205353 1 11.84189511 -13.58381063 0.217412504 2.46E-18 1.358853004 0.464819239 0.108369356 93.93310102 1.355337894 41.32007282 0.223665096 2.61E-14 13.58381063 1.358853004 KVASGVLS(ph)PPPAAPPPSSSSVPEAGGPPIKK ddPTM_A459_MK2206_30min_R2 1 KVASGVLSPPPAAPPPSSSSVPEAGGPPIKK 31 2 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 KVAS(0.047)GVLS(0.953)PPPAAPPPSSSSVPEAGGPPIKK 84.576 5.73E-07 17328000 101220 120540 111540 117650 130470 108600 148910 95645 116160 136760 TRUE FALSE 108969.481 114554.1589 115258.6879 108037.6187 125347.0922 112732.8491 129357.9381 108146.1299 126263.3868 132297.5324 0.823669792 0.865882808 0.871208146 0.816626106 0.947463569 0.852116038 0.97778043 0.817446312 0.954389583 1 17.01342663 -14.52287874 0.057119218 1.469760228 0.673857773 0.434827562 0.050206406 417.7234875 1.742926365 27.82855071 5.024093493 3.00E-15 14.52287874 -0.795902455 KVDEGAGDSAAVASGGAQT(ph)LALAGSPAPSGHPK ddPTM_A459_MK2206_30min_R1 1 KVDEGAGDSAAVASGGAQTLALAGSPAPSGHPK 33 1 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 KVDEGAGDSAAVAS(0.001)GGAQT(0.95)LALAGS(0.049)PAPS(0.001)GHPK 99.774 2.69E-11 21443000 8493.7 6257.4 6820.6 5471.2 7762.9 7282.4 7973.8 7213.8 6801 6033.1 TRUE FALSE 7771.266213 5850.042123 6357.636675 5892.592772 7453.687255 7694.723195 7441.882351 7150.730507 7507.988288 6780.525976 1.146115543 0.86277114 0.937631785 0.86904656 1.099278623 1.134826888 1.097537621 1.054598203 1.107287003 1 12.72718147 -6.279301303 24.56661783 1.088377399 0.946221286 0.376883239 0.080387088 622.8364093 856623.4072 0.024175966 0.027475134 5.26E-07 6.279301303 -0.142156112 KVDEGAGDSAAVASGGAQT(ph)LALAGSPAPSGHPK ddPTM_A459_MK2206_30min_R2 1 KVDEGAGDSAAVASGGAQTLALAGSPAPSGHPK 33 1 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 KVDEGAGDSAAVASGGAQT(0.887)LALAGS(0.113)PAPSGHPK 132.16 2.59E-25 46845000 198330 243280 215640 295580 287090 239920 301760 216510 222670 255680 TRUE FALSE 213514.2973 231199.069 222829.33 271430.1685 275817.4041 249050.3237 262138.5495 244808.6004 242037.4341 247337.1825 0.863251918 0.934752578 0.900913189 1.097409478 1.115147352 1.006926339 1.05984287 0.989776781 0.978572779 1 17.91611961 -5.745708791 24.90632591 1.038113335 0.903150488 0.649594218 0.045634201 152.1783183 240942.6826 0.013233351 0.0228182 1.80E-06 5.745708791 -0.134962847 KVDEGAGDSAAVASGGAQTLALAGS(ph)PAPSGHPK ddPTM_A459_MK2206_30min_R1 1 KVDEGAGDSAAVASGGAQTLALAGSPAPSGHPK 33 1 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 KVDEGAGDSAAVASGGAQT(0.197)LALAGS(0.801)PAPS(0.001)GHPK 122.43 3.39E-19 15259000 9208.3 6389.2 7735.7 5758.8 8670.7 7355.3 8289.9 7636.9 6277.8 6118.4 TRUE FALSE 8425.08573 5973.261919 7210.622237 6202.343774 8325.327658 7771.75073 7736.895897 7570.131388 6930.399775 6876.393584 1.22521866 0.868662017 1.048605224 0.901976261 1.210711335 1.130207373 1.125138607 1.100886867 1.007853854 1 12.74743641 -6.259694244 24.99300224 1.104031345 1.003618129 0.128677681 0.105956929 276.6725972 3962374.05 0.030485454 0.03736299 5.50E-07 6.259694244 -0.100413216 KVDEGAGDSAAVASGGAQTLALAGS(ph)PAPSGHPK ddPTM_A459_MK2206_30min_R2 2 KVDEGAGDSAAVASGGAQTLALAGSPAPSGHPK 33 1 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 KVDEGAGDSAAVASGGAQT(0.009)LALAGS(0.987)PAPS(0.003)GHPK;KVDEGAGDSAAVASGGAQTLALAGS(0.997)PAPS(0.003)GHPK 128.92 3.85E-25 77486500 239321 337626 289933 391821 368480 311225 420921 304303 300287 345388 TRUE FALSE 257643.5998 320859.9838 299599.2215 359807.9709 354011.6237 323068.8855 365653.5671 344076.4469 326405.4205 334118.0178 0.771115552 0.960319308 0.896686816 1.076888859 1.059540656 0.96693045 1.094384462 1.029805124 0.976916548 1 18.34999826 -3.925636346 0.835501395 1.029022594 3.72E-14 0.671892056 0.05209515 4.934055216 0.932318256 0.018103838 6.569779141 0.000118676 3.925636346 -1.029022594 KVDLTLLS(ph)PK ddPTM_A459_MK2206_30min_R1 1 KVDLTLLSPK 10 1 E7EVA0;P27816-4;B5MEG9 E7EVA0 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KVDLTLLS(1)PK 99.481 0.0094708 23166000 11549 15680 15176 15326 9630.9 9246.2 10094 10580 12069 10223 TRUE FALSE 10566.6969 14659.22915 14145.8954 16506.41118 9247.280859 9769.711854 9420.647678 10487.50018 13323.61574 11489.50242 0.919682726 1.275880244 1.231201743 1.436651525 0.804846069 0.850316358 0.819935219 0.912789762 1.159633834 1 13.4880287 -6.274206997 24.98497367 0.911280249 1.221237915 0.464506204 0.152763018 666.1025105 1303494.734 0.048089313 0.054874959 5.32E-07 6.274206997 0.309957666 KVDLTLLS(ph)PK ddPTM_A459_MK2206_30min_R2 1 KVDLTLLSPK 10 1 E7EVA0;P27816-4;B5MEG9 E7EVA0 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KVDLTLLS(1)PK 93.478 0.012918 16671000 194870 188210 196140 149390 173550 112750 215260 162560 126940 186870 TRUE FALSE 209789.397 178863.7651 202679.2097 137184.3591 166735.555 117040.7803 186996.1034 183807.1502 137981.0117 180772.4472 1.160516441 0.989441521 1.12118419 0.758878697 0.922350488 0.647448115 1.034428124 1.01678742 0.763285633 1 17.46381528 -5.74751128 24.99214738 0.877106226 1.080286852 0.375755241 0.125478675 262.7938401 471545.0977 0.033827061 0.058211203 1.79E-06 5.74751128 0.203180626 KVDT(ph)TPNQGK ddPTM_A459_MK2206_30min_R1 1 KVDTTPNQGK 10 1 Q9P2E9;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KVDT(0.669)T(0.331)PNQGK 105.95 0.015223 8722200 9212.4 6542 5608.9 8268.4 3157.4 3877.8 7265.3 10221 920.64 4971.4 TRUE FALSE 8428.837004 6116.114611 5228.183495 8905.233601 3031.634072 4097.357685 6780.645093 10131.63887 1016.343823 5587.294564 1.508572155 1.094646889 0.935727199 1.593836426 0.54259428 0.733334826 1.213582892 1.813335373 0.181902674 1 12.44793417 -2.346289209 1.200517666 1.022253519 199.9776313 0.099801695 0.449347681 1635.401019 7.684057111 0.130835174 889968.8924 0.004505166 2.346289209 198.9553778 KVDTT(ph)PNQGK ddPTM_A459_MK2206_30min_R2 1 KVDTTPNQGK 10 1 Q9P2E9;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KVDT(0.391)T(0.609)PNQGK 93.228 0.031844 75813000 163010 104840 112830 112590 112910 67515 139400 160680 109150 135970 TRUE FALSE 175490.1709 99633.79805 116591.6959 103391.0368 108476.5861 70084.33064 121096.6126 181681.4277 118643.6697 131533.31 1.334188054 0.757479592 0.886404333 0.786044515 0.824708099 0.53282572 0.920653578 1.381257931 0.902004744 1 17.00506867 -10.04302407 8.173114275 1.000000105 0.913703078 0.006553964 0.242906503 0 0 0.243785973 0.059126783 9.06E-11 10.04302407 -0.086297027 KVDWLTEK ddPTM_A459_MK2206_30min_R2 1 KVDWLTEK 8 1 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KSZ0;Q14240-2;Q14240;E7EQG2;J3KTN0;J3QL52;I3L3H2;P38919 P60842;I3L3H2 EIF4A1;EIF4A2;EIF4A3 "Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed" 0 105.98 0.01884 3964900 32320 33802 35466 41425 44439 39376 41088 36467 37532 38112 FALSE TRUE 34794.44405 32123.44183 36648.41874 38040.44499 42694.10157 40874.48127 35693.09624 41233.36211 40796.46552 36868.40856 0.943746839 0.871299931 0.994033108 1.031789721 1.15801314 1.108658683 0.968121425 1.118392784 1.106542623 1 15.17009752 -5.617380315 2.318329347 1.078424628 0.908523813 0.566680808 0.056968938 0.207690504 2.243732565 0.016738353 0.03597031 2.41E-06 5.617380315 -0.169900815 KVEEAEPEEFVVEK ddPTM_A459_MK2206_30min_R1 2 KVEEAEPEEFVVEK 14 1 Q13185;S4R2Y4;C9JMM0;B8ZZ43 Q13185 CBX3 Chromobox protein homolog 3 0 ; 202.63 6.06E-05 11657100 9900.1 10409.1 10181.2 9539.1 9571.3 8831.2 9109.7 9413.9 8820.8 8287.1 FALSE TRUE 9058.044508 9731.465698 9490.12851 10273.80313 9190.054853 9331.214912 8502.008535 9331.595265 9737.753726 9313.768512 0.972543444 1.04484728 1.018935407 1.103076925 0.986717121 1.001873184 0.912843016 1.001914021 1.045522413 1 13.18514931 KVEEAEPEEFVVEK ddPTM_A459_MK2206_30min_R2 2 KVEEAEPEEFVVEK 14 1 Q13185;S4R2Y4;C9JMM0;B8ZZ43 Q13185 CBX3 Chromobox protein homolog 3 0 ; 182.37 0.00010269 9541600 62009 71367 58291 68443 72999 56882 77092 58290 49322 72416 FALSE TRUE 66756.45672 67823.01856 60234.39285 62850.98796 70132.69247 59046.68437 66969.7278 65908.70314 53611.93841 70053.07185 0.952941177 0.968166231 0.859839423 0.897191034 1.001136576 0.842885013 0.955985598 0.940839586 0.765304604 1 16.09616069 KVEEDLKADEPSSEES(ph)DLEIDK ddPTM_A459_MK2206_30min_R1 1 KVEEDLKADEPSSEESDLEIDK 22 2 Q3KNR6;P50502;F6VDH7 Q3KNR6 ST13 Hsc70-interacting protein 1 KVEEDLKADEPS(0.108)S(0.166)EES(0.726)DLEIDK 67.832 0.0021787 9373900 4592.4 6300.5 6385.6 4592.3 3175 3143.6 5109 4529.5 8180 10143 TRUE FALSE 4201.792264 5890.336305 5952.163263 4945.999742 3048.533027 3321.587915 4768.187932 4489.899059 9030.340272 11399.59142 0.368591479 0.516714687 0.522138298 0.433875177 0.267424762 0.291377804 0.418277091 0.393864911 0.792163503 1 13.4766945 -8.408454967 2.850178563 0.995940004 0.400904585 0.867873954 0.079081366 0.092246079 1.45190752 0.08615034 0.023325005 3.90E-09 8.408454967 -0.595035419 down KVEEEGS(ph)PGDPDHEASTQGR ddPTM_A459_MK2206_30min_R1 4 KVEEEGSPGDPDHEASTQGR 20 1 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 KVEEEGS(0.999)PGDPDHEAS(0.001)TQGR;KVEEEGS(0.993)PGDPDHEAS(0.006)T(0.001)QGR;KVEEEGS(0.997)PGDPDHEAS(0.001)T(0.002)QGR;KVEEEGS(1)PGDPDHEASTQGR 129.4 9.20E-05 94748600 10372.7 9694.2 10299.9 9126 10022 8660.7 10099.8 9755.6 8563.7 7377.8 TRUE FALSE 9490.447396 9063.105818 9600.771485 9828.886101 9622.802518 9151.06135 9426.06077 9670.307818 9453.927261 8291.817564 1.144555741 1.093017996 1.157860917 1.185371727 1.160517877 1.103625505 1.136790661 1.166247055 1.140151383 1 13.01747266 -8.609210963 18.99711144 1 1.143360793 0.72630574 0.026365135 6030.144632 1326911.849 0.027224838 0.007029423 2.46E-09 8.609210963 0.143360793 KVEEEGS(ph)PGDPDHEASTQGR ddPTM_A459_MK2206_30min_R2 3 KVEEEGSPGDPDHEASTQGR 20 1 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(0.954)PGDPDHEAS(0.036)T(0.01)QGR 171.32 7.94E-10 92321300 67299.1 85701.1 68467.3 82111.8 81784.7 72115.3 89716.4 81673 68579.1 79062.4 TRUE FALSE 72451.57084 81445.308 70749.96561 75403.00328 78573.42174 74859.69828 77936.52891 92347.94153 74543.98616 76482.60036 0.947294816 1.064886753 0.92504655 0.985884409 1.027337216 0.978780767 1.019009926 1.207437261 0.974652873 1 16.22284395 -7.535723335 24.99642406 1.077271757 0.991193199 0.171676642 0.068312844 318.1925738 619215.4372 0.029895533 0.017272623 2.91E-08 7.535723335 -0.086078558 KVEEEQEADEEDVS(ph)EEEAESK ddPTM_A459_MK2206_30min_R1 4 KVEEEQEADEEDVSEEEAESK 21 1 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 KVEEEQEADEEDVS(0.982)EEEAES(0.018)K;KVEEEQEADEEDVS(0.979)EEEAES(0.021)K;KVEEEQEADEEDVS(0.989)EEEAES(0.011)K;KVEEEQEADEEDVS(0.999)EEEAES(0.001)K 163.31 2.10E-08 96510000 15462 16855.3 11978.8 12683.4 13813.7 12888 14201.6 12843.3 18468.5 14765.6 TRUE FALSE 14146.87571 15758.01691 11165.71243 13660.27767 13263.47108 13617.70742 13254.23718 12731.01238 20388.36667 16594.874 0.852484671 0.94957135 0.672841049 0.823162482 0.799251087 0.820597217 0.798694656 0.767165354 1.228594243 1 14.01845006 -8.253171949 24.99840738 1.114297128 0.810514041 0.682882747 0.082817465 292.7739937 885273.6126 0.055869691 0.020335732 5.58E-09 8.253171949 -0.303783087 KVEEEQEADEEDVS(ph)EEEAESK ddPTM_A459_MK2206_30min_R2 9 KVEEEQEADEEDVSEEEAESK 21 1 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 KVEEEQEADEEDVS(0.999)EEEAES(0.001)K;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(0.98)EEEAES(0.02)K;KVEEEQEADEEDVS(0.959)EEEAES(0.041)K;KVEEEQEADEEDVS(0.989)EEEAES(0.011)K;KVEEEQEADEEDVS(0.99)EEEAES(0.01)K;KVEEEQEADEEDVS(0.976)EEEAES(0.024)K;KVEEEQEADEEDVS(0.989)EEEAES(0.011)K;KVEEEQEADEEDVS(0.999)EEEAES(0.001)K 150.36 6.62E-07 315615800 888251 332773 460901 368431 328753 332074 908399 387801 415001 513793 TRUE FALSE 956256.1795 316247.9767 476267.2093 338329.0087 315844.5054 344711.3088 789125.1201 438487.9222 451097.0368 497027.9765 1.923948399 0.63627802 0.958230184 0.680704155 0.635466252 0.693545082 1.58768753 0.8822198 0.907588824 1 18.92296753 KVEGNFNPFAS(ph)PQK ddPTM_A459_MK2206_30min_R1 1 KVEGNFNPFASPQK 14 1 Q5TH58;Q9H6K1-2;Q9H6K1 Q5TH58 C6orf106 Uncharacterized protein C6orf106 1 KVEGNFNPFAS(1)PQK 144.4 0.00027214 69382000 10061 10863 10423 9562.2 8561.3 7708.9 7892.1 9157.2 8928.9 7834.1 TRUE FALSE 9205.259118 10155.81673 9715.5158 10298.6823 8220.285292 8145.371256 7365.632409 9077.139566 9857.091107 8804.647452 1.045500023 1.153460917 1.103453131 1.169687072 0.93363026 0.925121795 0.836561878 1.030948668 1.119532742 1 13.10404952 -6.265407657 24.85440893 0.966500915 1.119515536 0.459929059 0.076011238 293.0795956 1835636.014 0.024865404 0.029263733 5.43E-07 6.265407657 0.153014621 KVEGNFNPFAS(ph)PQK ddPTM_A459_MK2206_30min_R2 2 KVEGNFNPFASPQK 14 1 Q5TH58;Q9H6K1-2;Q9H6K1 Q5TH58 C6orf106 Uncharacterized protein C6orf106 1 KVEGNFNPFAS(1)PQK;KVEGNFNPFAS(1)PQK 132.79 0.00040001 96554000 213143 233980 207625 204861 234630 196344 250020 213165 195731 255460 TRUE FALSE 229461.392 222360.8934 214547.1139 188123.201 225417.2473 203816.0085 217192.0737 241026.3974 212755.3286 247124.3611 0.92852599 0.899793498 0.868174683 0.761249114 0.912161174 0.824750776 0.878877633 0.975324312 0.860924142 1 17.91487771 -7.621074229 6.620651183 0.937991405 0.863772464 0.289065411 0.055752347 0.296229491 17.06180586 0.026356113 0.015051629 2.39E-08 7.621074229 -0.074218941 KVELS(ph)ESEEDKGGK ddPTM_A459_MK2206_30min_R1 3 KVELSESEEDKGGK 14 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KVELS(0.995)ES(0.005)EEDKGGK;KVELS(0.989)ES(0.011)EEDKGGK;KVELS(1)ESEEDKGGK 98.077 0.012035 171930000 16640.2 21972.9 22950.4 19623.8 11369.5 9769.3 12811.6 14565.5 18773 17078.6 TRUE FALSE 15224.86361 20542.46022 21392.59079 21135.22848 10916.62874 10322.42932 11956.96154 14438.15537 20724.52053 19194.4259 0.793191924 1.07023051 1.114521002 1.101112822 0.568739529 0.537782655 0.622939264 0.752205637 1.079715571 1 14.22839979 -6.250612801 24.84732672 0.729853774 1.030137175 0.314044999 0.184409988 756.1256263 1735330.356 0.056922347 0.072742279 5.62E-07 6.250612801 0.300283401 KVELS(ph)ESEEDKGGK ddPTM_A459_MK2206_30min_R2 1 KVELSESEEDKGGK 14 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KVELS(0.999)ES(0.001)EEDKGGK 96.447 0.013328 28778000 81503 64317 75396 68986 73410 32372 86963 75735 56540 82186 TRUE FALSE 87742.93235 61123.11131 77909.66501 63349.62312 70527.55454 33603.93914 75544.65364 85633.82454 61457.747 79504.27755 1.103625302 0.768802801 0.97994306 0.796807733 0.88709132 0.422668316 0.95019609 1.077097072 0.773011829 1 16.27874486 -10.35884845 12.20818576 0.999991563 0.857656973 0.047283205 0.18466612 0 0 0.178879132 0.043384562 4.38E-11 10.35884845 -0.142334589 KVESLQEEIAFLK ddPTM_A459_MK2206_30min_R1 2 KVESLQEEIAFLK 13 1 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 ; 175.66 0.00013404 32530000 21803 21511 21152 21180 21594 19359.8 19971 18924.8 15291.8 17452.2 FALSE TRUE 19948.54036 20110.62999 19716.26117 22811.28727 20733.86525 20455.93515 18638.77103 18759.34247 16881.43733 19614.31029 1.017040113 1.025303959 1.00519778 1.162992067 1.057078477 1.042908715 0.950263902 0.956411018 0.860669434 1 14.25961899 -7.284321382 2.83309016 0.933476387 1.055508243 0.520998151 0.051701081 0.225031167 3.615363158 0.024365102 0.016210284 5.20E-08 7.284321382 0.122031855 KVESLQEEIAFLKK ddPTM_A459_MK2206_30min_R1 1 KVESLQEEIAFLKK 14 2 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 116.9 0.0016383 5419100 3559.7 3515.1 4172.3 3918.7 4044.9 3361.1 3291.2 3695.1 2825.8 2649.1 FALSE TRUE 3256.928822 3286.266351 3889.095901 4220.518953 3883.783068 3551.402577 3071.650053 3662.79413 3119.552022 2977.290508 1.093923758 1.103777526 1.306253418 1.417570419 1.304468965 1.192830383 1.031693093 1.230244117 1.047782208 1 11.53978428 -7.040227913 5.844979241 1.097663368 1.250436158 0.349241357 0.106760408 0.277395323 25.41330281 0.044549528 0.035251362 9.12E-08 7.040227913 0.152772791 KVEVVS(ph)PATPVPSETAPASVFPQNGAAR ddPTM_A459_MK2206_30min_R2 2 KVEVVSPATPVPSETAPASVFPQNGAAR 28 1 E9PRM3;E9PRL6;Q92993-2;Q92993-4;Q92993;Q92993-3 E9PRM3 KAT5 Histone acetyltransferase KAT5 1 KVEVVS(0.99)PAT(0.01)PVPSETAPASVFPQNGAAR;KVEVVS(0.872)PAT(0.128)PVPSETAPASVFPQNGAAR 80.72 3.21E-05 8392200 32219.8 38903 32323.5 38613 35614.3 40241 39775 24758.2 33114.8 36606 TRUE FALSE 34686.57266 36971.13359 33401.14936 35458.19438 34215.90363 41772.39945 34552.49472 27994.18175 35995.06545 35411.54922 0.979527116 1.044041687 0.943227565 1.00131723 0.966235717 1.179626432 0.975740838 0.790538182 1.016478133 1 15.11193234 -7.527738057 24.99997815 0.918732794 1.0188382 0.160184928 0.08331673 206.0961223 1060290.671 0.038000001 0.022042259 2.97E-08 7.527738057 0.100105406 KVEVVSPAT(ph)PVPSETAPASVFPQNGAAR ddPTM_A459_MK2206_30min_R2 1 KVEVVSPATPVPSETAPASVFPQNGAAR 28 1 E9PRM3;E9PRL6;Q92993-2;Q92993-4;Q92993;Q92993-3 E9PRM3 KAT5 Histone acetyltransferase KAT5 1 KVEVVS(0.142)PAT(0.857)PVPSETAPASVFPQNGAAR 93.191 7.08E-06 3898600 14469 15382 12381 16290 18908 17018 18892 16114 13031 17978 TRUE FALSE 15576.75776 14618.15225 12793.77636 14959.05489 18165.57691 17665.63192 16411.45771 18220.15513 14164.41283 17391.37933 0.89565971 0.84054013 0.735638969 0.860141948 1.044516169 1.015769456 0.943654749 1.047654403 0.814450226 1 14.08608474 -6.1032491 5.646154189 0.979567534 0.821386663 0.492902783 0.072463699 0.185413135 8.370942053 0.021156639 0.027664165 7.88E-07 6.1032491 -0.158180871 KVGDDIAK ddPTM_A459_MK2206_30min_R2 1 KVGDDIAK 8 1 P30050 P30050 RPL12 60S ribosomal protein L12 0 100.02 0.024601 16692000 134650 134020 133480 128820 136760 90470 135260 129320 118850 154370 FALSE TRUE 144958.9075 127364.7617 137930.1566 118294.9939 131390.1152 93912.89925 117500.1995 146222.568 129187.3582 149332.9195 0.97070966 0.852891392 0.923642001 0.792156172 0.87984696 0.628882764 0.786833873 0.979171695 0.865096313 1 17.18817271 -7.763211823 24.99897641 0.941600513 0.830088758 0.241184759 0.092731338 75.70541402 1067704.705 0.049912109 0.025926984 1.72E-08 7.763211823 -0.111511755 KVIS(ph)PPPFAPSPTLPPTFHPEEFLDEDLK ddPTM_A459_MK2206_30min_R1 1 KVISPPPFAPSPTLPPTFHPEEFLDEDLK 29 1 Q5TC82-2;Q5TC82 Q5TC82-2 RC3H1 Roquin-1 1 KVIS(0.993)PPPFAPS(0.004)PT(0.004)LPPTFHPEEFLDEDLK 65.624 0.00043923 2233500 660.66 782.29 716.77 586.15 326.29 357.49 650.98 625.15 750.55 791.75 TRUE FALSE 604.4673977 731.3627788 668.1176494 631.2953746 313.2931784 377.7307749 607.554312 619.6843795 828.5723584 889.8379674 0.679300524 0.821905567 0.750830684 0.709449807 0.352078906 0.424493884 0.682769599 0.69640137 0.931149702 1 9.797398846 -8.254400029 2.212367615 1.001751866 0.628343555 0.492027825 0.134932567 0.300606194 2.681104911 0.144461104 0.041989746 5.57E-09 8.254400029 -0.373408311 KVNVTVDYIRPAS(ph)PATETVPAFSER ddPTM_A459_MK2206_30min_R2 1 KVNVTVDYIRPASPATETVPAFSER 25 2 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 1 KVNVT(0.006)VDY(0.041)IRPAS(0.8)PAT(0.098)ET(0.053)VPAFS(0.002)ER 42.367 0.034107 7483300 18849 28666 27386 28179 28715 31176 25144 24992 30818 22920 TRUE FALSE 20292.09393 27242.48812 28299.03557 25876.68556 27587.50482 32362.42453 21842.5626 28258.54021 33498.49393 22172.12228 0.91520756 1.228682026 1.276334093 1.167082034 1.244242859 1.459599768 0.985136304 1.274507684 1.510838408 1 14.43645925 -4.761977202 5.432957288 1.246293207 0.898598536 0.271044512 0.15884784 0.200823377 18.34235187 0.038106913 0.263492605 1.73E-05 4.761977202 -0.347694671 KVPCS(ph)PDFQR ddPTM_A459_MK2206_30min_R1 1 KVPCSPDFQR 10 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 KVPCS(1)PDFQR 115.92 0.011666 6376900 2449.9 2439 2662.4 2261.8 2415.9 2261.1 2480.3 2254.9 1911.7 2009.5 TRUE FALSE 2241.52314 2280.220657 2481.683706 2436.004228 2319.669587 2389.121528 2314.843713 2235.185647 2110.428056 2258.452031 0.992504206 1.009638737 1.098842779 1.078616767 1.02710598 1.057857991 1.024969174 0.989698084 0.934457773 1 11.14111856 -7.766463795 2.615433548 0.966140936 1.045548212 0.474559651 0.032932546 0.247261476 3.390491374 0.022177791 0.009820349 1.71E-08 7.766463795 0.079407276 KVPCS(ph)PDFQR ddPTM_A459_MK2206_30min_R2 1 KVPCSPDFQR 10 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 KVPCS(1)PDFQR 112.5 0.014728 10600000 19274 23167 23864 26411 22280 21056 21396 19366 18814 21628 TRUE FALSE 20749.63226 22016.56047 24659.61385 24253.13682 21405.17525 21857.30083 18586.6795 21897.20269 20450.40771 20922.28013 0.991748133 1.052302155 1.17862937 1.159201419 1.023080425 1.044690191 0.888367777 1.046597338 0.977446415 1 14.35275247 -6.669770895 2.365001652 0.984035734 1.09652825 0.364776421 0.064068741 0.328689897 3.756119605 0.025031703 0.024488205 2.14E-07 6.669770895 0.112492516 KVPT(ph)IILS(ph)VS(ph)Y(ph)K ddPTM_A459_MK2206_30min_R1 1 KVPTIILSVSYK 12 1 R4GN78;F8VR14;H0YI72;Q7Z6G8-9;Q7Z6G8-8;Q7Z6G8-10;Q7Z6G8-7;Q7Z6G8-2;Q7Z6G8-5;Q7Z6G8-4;Q7Z6G8-3;Q7Z6G8-6;Q7Z6G8 R4GN78 ANKS1B Ankyrin repeat and sterile alpha motif domain-containing protein 1B 4 KVPT(1)IILS(1)VS(1)Y(1)K 61.235 0.03985 1818400 588.83 557.94 591.44 630.95 555.59 375.65 375.4 444.7 469.32 550.36 TRUE FALSE 538.7469164 521.6180046 551.2947006 679.5458783 533.4596738 396.9189784 350.357751 440.8120348 518.1074935 618.5427518 0.870993824 0.843301458 0.891279866 1.098623945 0.862445922 0.641700153 0.566424471 0.712662194 0.837626004 1 9.272729503 -6.586188925 6.440886376 0.723643922 0.925215228 0.284900476 0.127244026 0.234962017 18.34927274 0.042802145 0.04287497 2.59E-07 6.586188925 0.201571306 KVQAEDEANGLQT(ph)TPASR ddPTM_A459_MK2206_30min_R1 1 KVQAEDEANGLQTTPASR 18 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 KVQAEDEANGLQT(0.918)T(0.079)PAS(0.003)R 114.58 0.0013535 7793500 4667.2 4410.4 4160.3 3916 4110 3414.8 4482.9 4101.6 3227.5 3379.7 TRUE FALSE 4270.230132 4123.282158 3877.910427 4217.610999 3946.289997 3608.143025 4183.853921 4065.740144 3563.010175 3798.402751 1.124217312 1.085530532 1.020931871 1.110364349 1.038934061 0.949910597 1.101477172 1.070381529 0.938028537 1 11.89117717 -1.522878745 0.240005156 1.001591838 1.676507353 0.313317113 0.051842811 70.75726154 0.945348275 0.072751278 19.0209764 0.03 1.522878745 0.674915515 KVQAEDEANGLQTT(ph)PASR ddPTM_A459_MK2206_30min_R1 1 KVQAEDEANGLQTTPASR 18 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 KVQAEDEANGLQT(0.279)T(0.694)PAS(0.027)R 84.025 0.010323 8022200 2721.9 2521.7 2641 2247.1 2576.4 2302.8 2571 2153.8 2193.3 2048.6 TRUE FALSE 2490.388112 2357.536872 2461.736278 2420.172031 2473.776532 2433.182546 2399.493281 2134.969554 2421.301384 2302.396034 1.081650626 1.023949328 1.069206271 1.051153666 1.074435716 1.056804524 1.042172261 0.927281633 1.051644178 1 11.1689203 -7.543536493 24.97221382 0.990623094 1.05788843 0.469726425 0.031604719 188.0243681 227291.5113 0.013585823 0.007844885 2.86E-08 7.543536493 0.067265336 KVQAEDEANGLQTTPAS(ph)R ddPTM_A459_MK2206_30min_R1 1 KVQAEDEANGLQTTPASR 18 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 KVQAEDEANGLQT(0.224)T(0.224)PAS(0.552)R 78.354 0.0066754 7199700 1526.4 1357.2 1302.6 1446.8 1163.6 1020.7 1054.5 1320.1 1180.4 961.49 TRUE FALSE 1396.571665 1268.846033 1214.183141 1558.232787 1117.251348 1078.491152 984.156229 1308.558505 1303.106804 1080.60664 1.292395968 1.174197887 1.123612512 1.44199816 1.033911237 0.998042314 0.910744199 1.210948051 1.205903014 1 10.07762574 -6.325261276 24.99930096 1.059918902 1.242460545 0.407504853 0.116431612 242.7734666 95094.59655 0.037916902 0.042993733 4.73E-07 6.325261276 0.182541643 KVQAEDEANGLQTTPAS(ph)R ddPTM_A459_MK2206_30min_R2 2 KVQAEDEANGLQTTPASR 18 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 KVQAEDEANGLQT(0.004)T(0.074)PAS(0.922)R;KVQAEDEANGLQTTPAS(1)R 165.58 8.22E-08 60965000 157853 195950 153966 185982 228855 148629 162622 129440 107880 145847 TRUE FALSE 169938.347 186219.4079 159099.1496 170786.6757 219869.0028 154285.1807 141269.5361 146358.2524 117263.2074 141088.0243 1.204484561 1.319881038 1.127658781 1.210497322 1.558381754 1.093538459 1.001286514 1.037354185 0.831135087 1 17.10623601 -6.991244277 24.91681325 0.981536144 1.278633418 0.616706692 0.118051489 134.7108565 383354.7434 0.042426754 0.037362591 1.02E-07 6.991244277 0.297097274 KVQVAALQAS(ph)PPLDQDDR ddPTM_A459_MK2206_30min_R1 2 KVQVAALQASPPLDQDDR 18 1 Q9UDY2-7;Q9UDY2-4;A0A3B3IU51;A0A1B0GTW1;A0A2R8YDH4;A0A3B3ITE1;Q9UDY2-2;Q9UDY2-6;Q9UDY2-3;Q9UDY2;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3ISZ5;A0A3B3IRI3;A0A3B3IU26;B1AN86;U3KQJ2 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 KVQVAALQAS(1)PPLDQDDR;KVQVAALQAS(1)PPLDQDDR 102.29 0.0033537 0 7528.2 6096.9 7401.5 6188.7 7326.3 6334.9 6790 6230.8 5677.2 4594.1 TRUE FALSE 6887.887058 5699.990702 6899.106802 6665.354746 7034.477957 6693.576563 6337.051489 6176.324773 6267.365256 5163.251792 1.334021143 1.103953658 1.336194143 1.290921887 1.36241234 1.296387787 1.227337295 1.196208324 1.213840717 1 12.33406424 -8.876514936 0.74245429 0.99903238 1.281284241 0.587986662 0.069599652 0.913457944 0.939771921 0.073559679 0.025806532 1.33E-09 8.876514936 0.282251861 KVQVAALQAS(ph)PPLDQDDR ddPTM_A459_MK2206_30min_R2 2 KVQVAALQASPPLDQDDR 18 1 Q9UDY2-7;Q9UDY2-4;A0A3B3IU51;A0A1B0GTW1;A0A2R8YDH4;A0A3B3ITE1;Q9UDY2-2;Q9UDY2-6;Q9UDY2-3;Q9UDY2;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3ISZ5;A0A3B3IRI3;A0A3B3IU26;B1AN86;U3KQJ2 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 KVQVAALQAS(1)PPLDQDDR;KVQVAALQAS(1)PPLDQDDR 98.76 0.0016397 20210700 81681 104527 91147 108320 98063 90627 114704 79114 81594 90377 TRUE FALSE 87934.56016 99336.34118 94185.79549 99469.9095 94212.55389 94075.87399 99643.22702 89454.47144 88690.89863 87428.00589 1.005793959 1.13620733 1.077295479 1.137735083 1.077601541 1.076038199 1.139717485 1.023178677 1.014444945 1 16.41580787 -7.882675722 6.956544467 1.01123217 1.094318692 0.483416967 0.038212281 0.177324774 9.972427951 0.019888468 0.009472853 1.31E-08 7.882675722 0.083086522 KVS(ph)VSESNVLLDEEVLTDPK ddPTM_A459_MK2206_30min_R2 2 KVSVSESNVLLDEEVLTDPK 20 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 KVS(0.437)VS(0.437)ES(0.127)NVLLDEEVLTDPK;KVS(0.348)VS(0.348)ES(0.303)NVLLDEEVLTDPK 132.9 7.13E-05 7418000 109350.2 96422 86431.3 91273.8 96370.7 62774.5 102029.2 76730.2 64132.6 91605 TRUE FALSE 117722.1354 91633.82369 89312.8764 83816.43857 92586.70209 65163.42759 88632.64348 86759.10059 69710.73762 88615.93635 1.328453326 1.034055808 1.007864726 0.945839338 1.044808709 0.735346601 1.000188534 0.979046255 0.786661412 1 16.43527855 -1.522878924 0.80594053 0.921062505 105.2392153 0.623059431 0.092733854 328.5604374 1.114147323 0.031911396 62612.27768 0.029999988 1.522878924 104.3181528 KVSGDS(ph)SHTETTAEEVPEDPLLK ddPTM_A459_MK2206_30min_R2 1 KVSGDSSHTETTAEEVPEDPLLK 23 1 H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;H7C231;H7C2V9 H7BYY2 BCOR BCL-6 corepressor 1 KVS(0.022)GDS(0.292)S(0.292)HT(0.292)ET(0.08)T(0.023)AEEVPEDPLLK 57.484 0.0081397 3538100 13101 15446 16011 17721 21340 14648 18580 17274 15595 20201 TRUE FALSE 14104.02263 14678.9741 16544.79875 16273.13761 20502.08438 15205.4399 16140.42368 19531.77111 16951.42491 19541.84302 0.721734517 0.751156075 0.846634513 0.832733002 1.049137707 0.778096512 0.825941732 0.999484598 0.867442487 1 14.25427892 -3.247464645 0.404396509 0.928182539 1.65E-18 0.424403854 0.08104591 19.11812065 0.921133564 0.060637593 11.11021376 0.000565634 3.247464645 -0.928182539 KVSGTLDT(ph)PEK ddPTM_A459_MK2206_30min_R2 1 KVSGTLDTPEK 11 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 KVS(0.004)GT(0.002)LDT(0.994)PEK 85.006 0.044282 46694000 57488 46796 47178 45325 46403 30500 67667 55300 34596 68237 TRUE FALSE 61889.32548 44472.17869 48750.89097 41621.80251 44580.98506 31660.69887 58782.24162 62527.89987 37605.09754 66010.43228 0.937568856 0.673714399 0.738533127 0.630533706 0.67536272 0.479631746 0.890499268 0.947242697 0.569684158 1 16.01040643 -10.38552651 6.21559964 1.000000023 0.725406756 0.233233764 0.148487058 4.88E-08 8.72E-09 0.145464834 0.035280401 4.12E-11 10.38552651 -0.274593268 KVSSSS(ph)PQSGCPSPTIPAGK ddPTM_A459_MK2206_30min_R2 1 KVSSSSPQSGCPSPTIPAGK 20 1 E7EWD6;Q76L83;A0A5F9ZHC8 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 KVS(0.221)S(0.221)S(0.221)S(0.337)PQSGCPSPTIPAGK 102.78 0.00031879 6780100 44805 55791 45891 62437 65010 61388 61630 46002 59654 67016 TRUE FALSE 48235.30525 53020.50007 47420.98304 57335.69737 62457.38075 63724.16336 53537.90697 52014.61935 64842.59709 64829.27341 0.744035876 0.817848131 0.73147485 0.884410612 0.963413246 0.982953533 0.8258292 0.802332289 1.00020552 1 15.98435778 -5.877349401 5.189892213 0.917246126 0.770573489 0.533910471 0.06812586 0.183881509 7.594411742 0.020096398 0.030430101 1.33E-06 5.877349401 -0.146672637 KVSSSSPQSGCPSPT(ph)IPAGK ddPTM_A459_MK2206_30min_R2 1 KVSSSSPQSGCPSPTIPAGK 20 1 E7EWD6;Q76L83;A0A5F9ZHC8 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 KVSSSSPQSGCPS(0.118)PT(0.882)IPAGK 88.264 0.0025032 5964200 25176 33115 32889 34162 37097 36105 41001 29998 33465 37330 TRUE FALSE 27103.49392 31470.55725 33985.50284 31370.85532 35640.38538 37479.00107 35617.51945 33918.8416 36375.72521 36111.92516 0.750541374 0.871472709 0.941115786 0.868711795 0.98694227 1.037856634 0.986309074 0.939269824 1.007305068 1 15.14018771 -3.551930923 0.538814818 0.99238042 4.77E-13 0.791980496 0.037532032 6.603392942 0.525841083 0.02091232 5.514851954 0.000280588 3.551930923 -0.99238042 KVSVS(ph)ESNVLLDEEVLTDPK ddPTM_A459_MK2206_30min_R1 1 KVSVSESNVLLDEEVLTDPK 20 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 KVS(0.346)VS(0.462)ES(0.193)NVLLDEEVLTDPK 76.55 0.0028943 10156000 5089.9 6405.7 6064.7 6056.4 4254.6 4067.2 5634.7 4535.1 6168.8 5610.7 TRUE FALSE 4656.977277 5988.687766 5653.045061 6522.864977 4085.130273 4297.481349 5258.819444 4495.450099 6810.068835 6305.795875 0.738523316 0.949711644 0.896483992 1.034423744 0.647837379 0.681512918 0.833966013 0.712907647 1.079969757 1 12.62246275 -8.27200025 24.67828387 1.039984922 0.817667854 0.374236147 0.117776487 784.9493893 1834219.586 0.115640459 0.03116527 5.35E-09 8.27200025 -0.222317067 KVSVS(ph)ESNVLLDEEVLTDPK ddPTM_A459_MK2206_30min_R2 1 KVSVSESNVLLDEEVLTDPK 20 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 KVS(0.291)VS(0.566)ES(0.143)NVLLDEEVLTDPK 151.41 5.85E-06 6773000 32596 28274 28452 27297 29410 15820 30198 20460 19552 31434 TRUE FALSE 35091.57482 26869.95427 29400.57548 25066.74778 28255.21563 16422.04119 26232.96633 23134.19225 21252.59762 30408.31115 1.15401262 0.883638494 0.96685986 0.824338703 0.929193847 0.540051077 0.86269067 0.760785173 0.698907529 1 14.89217807 -1.522889581 0.547275507 0.777748891 16.44870107 0.39781644 0.125657146 126.4723189 1.168380571 0.060004942 2327.24898 0.029999251 1.522889581 15.67095218 KVSVSES(ph)NVLLDEEVLTDPK ddPTM_A459_MK2206_30min_R1 2 KVSVSESNVLLDEEVLTDPK 20 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 KVS(0.114)VS(0.114)ES(0.771)NVLLDEEVLTDPK;KVS(0.182)VS(0.085)ES(0.733)NVLLDEEVLTDPK 129.9 8.91E-05 14101300 5805.9 6736.8 6844.9 5890.6 4586.5 5492.2 5839.3 5737.3 6542.6 6175.1 TRUE FALSE 5312.077717 6298.233096 6380.287259 6344.295033 4403.809993 5803.163618 5449.770951 5687.139391 7222.726683 6940.118008 0.765416051 0.907510951 0.919334117 0.914148005 0.634543964 0.836176505 0.785256237 0.819458601 1.040721019 1 12.76074448 -8.258713125 24.58889846 1.020360529 0.824750097 0.486091541 0.081261193 161.5155807 1456801.888 0.064069512 0.021702013 5.51E-09 8.258713125 -0.195610432 KVTAEADSS(ph)SPTGILATSESK ddPTM_A459_MK2206_30min_R2 3 KVTAEADSSSPTGILATSESK 21 1 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 KVTAEADS(0.001)S(0.486)S(0.486)PT(0.027)GILATSESK;KVTAEADS(0.024)S(0.846)S(0.107)PT(0.022)GILATSESK;KVTAEADS(0.014)S(0.486)S(0.403)PT(0.098)GILATSESK 108.57 0.00047143 47090800 166596 187941 174962 179029 169673 144617 193177 153034 145979 190303 TRUE FALSE 179350.7179 178608.1232 180795.1458 164401.758 163010.7855 150120.5013 167812.6279 173036.0692 158675.9896 184093.4287 0.974237479 0.970203687 0.982083647 0.893034364 0.885478567 0.815458229 0.911562292 0.939936153 0.86193185 1 17.4900786 -5.763767544 24.98698477 0.894776642 0.974977824 0.351912802 0.045745612 60.49194783 649242.2099 0.012538875 0.019632007 1.72E-06 5.763767544 0.080201182 KVTAEADSSS(ph)PTGILATSESK ddPTM_A459_MK2206_30min_R1 1 KVTAEADSSSPTGILATSESK 21 1 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 KVTAEADS(0.007)S(0.15)S(0.789)PT(0.053)GILATSESK 73.672 0.0018737 37150000 8896.2 9186 8544.7 7760.8 8207.7 7132.1 8319.2 7740.1 7827.6 6603.2 TRUE FALSE 8139.531474 8587.98973 7964.709571 8358.538161 7880.769929 7535.913339 7764.241347 7672.429122 8641.307031 7421.254268 1.096786497 1.157215401 1.073229576 1.126297235 1.061918868 1.015450093 1.046216861 1.033845337 1.164399806 1 12.85744732 -6.335901565 5.427893224 1.05240904 1.113572926 0.290137687 0.045886021 0.290306566 15.500567 0.014085545 0.016091306 4.61E-07 6.335901565 0.061163887 KVTAEADSSS(ph)PTGILATSESK ddPTM_A459_MK2206_30min_R2 1 KVTAEADSSSPTGILATSESK 21 1 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 KVT(0.004)AEADS(0.025)S(0.222)S(0.526)PT(0.222)GILATSESK 58.324 0.012995 35187000 71505 80534 77155 82782 86896 62830 87524 76989 62939 81401 TRUE FALSE 76979.47778 76534.79867 79727.30919 76018.44579 83484.02642 65221.03968 76031.99366 87051.72664 68413.32045 78744.89204 0.977580587 0.971933502 1.012475948 0.965376215 1.060183388 0.828257402 0.965548262 1.105490456 0.86879693 1 16.26489872 KVTGTEGSSSTLVDYTST(ph)SSTGGSPVRK ddPTM_A459_MK2206_30min_R2 1 KVTGTEGSSSTLVDYTSTSSTGGSPVRK 28 2 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 KVTGTEGSS(0.002)S(0.001)T(0.001)LVDY(0.005)T(0.024)S(0.12)T(0.17)S(0.17)S(0.17)T(0.17)GGS(0.17)PVRK 62.765 0.0027481 10800000 29523 36881 32471 40087 46245 35103 42684 35321 31034 42881 TRUE FALSE 31783.30358 35049.54317 33553.56693 36811.76387 44429.18894 36438.86926 37079.53953 39937.57598 33733.28122 41481.79648 0.766198822 0.844937928 0.808874489 0.887419712 1.071052671 0.878430356 0.893874969 0.962773538 0.813206854 1 15.34019075 -5.887910904 4.399602974 0.933394649 0.811000724 0.415976635 0.068394306 0.220271358 7.428448613 0.019373065 0.029637857 1.29E-06 5.887910904 -0.122393925 KVTGTEGSSSTLVDYTSTSSTGGS(ph)PVR ddPTM_A459_MK2206_30min_R1 3 KVTGTEGSSSTLVDYTSTSSTGGSPVR 27 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 KVTGTEGSSSTLVDYT(0.001)S(0.019)T(0.047)S(0.031)S(0.021)T(0.021)GGS(0.86)PVR;KVTGTEGSSSTLVDYTSTS(0.002)S(0.002)T(0.002)GGS(0.995)PVR;KVTGTEGSSSTLVDYT(0.003)S(0.002)T(0.008)S(0.11)S(0.11)T(0.113)GGS(0.653)PVR 167.86 9.19E-22 32168200 16380.4 16666 16468.8 13878.6 17539.7 17020.9 19084.9 15576.8 15863.7 14907.7 TRUE FALSE 14987.16096 15581.04037 15350.94374 14947.53218 16841.05661 17984.60865 17811.78114 15440.61368 17512.78838 16754.57842 0.894511374 0.929957172 0.916223814 0.892146123 1.005161466 1.073414573 1.063099333 0.92157578 1.045253897 1 14.03226777 -6.320384907 5.592352532 1.020088676 0.910378721 0.636766704 0.040694 0.147441117 9.812957215 0.013209848 0.015145197 4.78E-07 6.320384907 -0.109709955 KVTGTEGSSSTLVDYTSTSSTGGS(ph)PVR ddPTM_A459_MK2206_30min_R2 2 KVTGTEGSSSTLVDYTSTSSTGGSPVR 27 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 KVTGTEGSSSTLVDY(0.001)T(0.004)ST(0.004)S(0.037)S(0.037)T(0.037)GGS(0.881)PVR;KVTGTEGSSSTLVDYT(0.05)S(0.04)T(0.169)S(0.132)S(0.132)T(0.132)GGS(0.345)PVR 146.65 5.59E-14 38665000 187311 198616 186772 243539 213515 204621 236467 195959 186124 220406 TRUE FALSE 201651.6742 188753.0183 192998.8853 223641.0847 205131.3283 212407.9955 205418.5989 221571.5141 202312.7291 213214.1703 0.945770508 0.885274267 0.905187892 1.048903478 0.962090503 0.996218944 0.963437836 1.039196944 0.948870935 1 17.7019438 -5.736557487 24.98333084 0.993212507 0.909397158 0.561449055 0.033189011 153.1648207 153787.9759 0.008398986 0.014539838 1.83E-06 5.736557487 -0.083815349 KVTS(ph)PLQSPTK ddPTM_A459_MK2206_30min_R1 1 KVTSPLQSPTK 11 1 E9PKC0;Q6IQ23;Q6IQ23-2;H0YDE2;A0A1B0GTN9;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 KVT(0.017)S(0.982)PLQS(0.001)PTK 188.48 3.50E-05 6562300 3243.4 3681.5 3593.2 2707.2 3372.7 2699.8 2713 3018.7 3003.5 2739.6 TRUE FALSE 2967.531798 3441.833681 3349.303595 2915.709013 3238.358217 2852.660343 2532.02072 2992.307824 3315.724573 3079.002331 0.963796542 1.117840557 1.087788587 0.94696551 1.051755689 0.92648853 0.822351024 0.971843312 1.076882775 1 11.58824724 -5.76396826 24.99857794 0.965054122 1.062611769 0.208871777 0.075443584 95.47088282 943768.2744 0.022072152 0.034513595 1.72E-06 5.76396826 0.097557647 KVTS(ph)PLQSPTK ddPTM_A459_MK2206_30min_R2 1 KVTSPLQSPTK 11 1 E9PKC0;Q6IQ23;Q6IQ23-2;H0YDE2;A0A1B0GTN9;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 KVT(0.077)S(0.922)PLQS(0.001)PTK 73.833 0.029056 23177000 134670 181590 182050 188320 151720 148470 164970 139780 148110 135110 TRUE FALSE 144980.4387 172572.5047 188119.4561 172933.6536 145762.7105 154120.1299 143309.2408 158049.7259 160992.3401 130701.3718 1.109249557 1.320357257 1.439307435 1.323120418 1.115234741 1.1791776 1.096463173 1.209243054 1.23175708 1 16.99591476 -6.256927575 24.53325326 1.149025537 1.309697773 0.386727963 0.097347308 324.5298391 1764650.966 0.029596737 0.036912508 5.53E-07 6.256927575 0.160672236 KVVDYSQFQES(ph)DDADEDYGR ddPTM_A459_MK2206_30min_R1 15 KVVDYSQFQESDDADEDYGR 20 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYS(0.001)QFQES(0.999)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR 160.15 4.93E-07 768351100 68739.52 71032.93 71527.36 61965.78 68282.39 65638.79 68972.21 64401.98 60802.31 57852.56 TRUE FALSE 62892.86286 66408.67335 66672.28209 66738.39511 65562.55782 69355.20157 64371.19972 63838.92028 67122.92771 65019.7719 0.967288273 1.021361217 1.025415503 1.026432317 1.008348013 1.066678635 0.990025001 0.981838576 1.032346404 1 15.98859087 -4.758667058 24.97248514 1.017377347 0.967288205 0.298421655 0.022829415 98.38657446 886071.8981 0.005749326 0.038625624 1.74E-05 4.758667058 -0.050089142 KVVDYSQFQES(ph)DDADEDYGR ddPTM_A459_MK2206_30min_R2 16 KVVDYSQFQESDDADEDYGR 20 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(0.999)DDADEDY(0.001)GR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDY(0.001)S(0.001)QFQES(0.957)DDADEDY(0.042)GR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR 151.84 5.30E-06 1705612100 2749142.8 3889692.6 3413868.2 3953971.6 3827053 3553087.9 3841854.7 3139734.9 3261470.1 3571239.8 TRUE FALSE 2959619.287 3696536.122 3527684.862 3630919.472 3676783.67 3688303.15 3337414.563 3550109.032 3545146.874 3454710.538 0.85669096 1.069998798 1.021123137 1.051005412 1.064281256 1.067615683 0.966047525 1.027614034 1.026177688 1 21.7201334 -4.754207053 24.95938421 1.033727429 0.856690644 0.742358834 0.031092523 128.5368671 443553.297 0.007903167 0.078826482 1.76E-05 4.754207053 -0.177036784 KVVDYSQFQES(ph)DDADEDYGRDSGPPTK ddPTM_A459_MK2206_30min_R1 2 KVVDYSQFQESDDADEDYGRDSGPPTK 27 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDYS(0.001)QFQES(0.991)DDADEDY(0.003)GRDS(0.005)GPPTK;KVVDY(0.009)S(0.04)QFQES(0.947)DDADEDY(0.001)GRDS(0.003)GPPTK 85.17 7.18E-05 24293900 2314.4 1879.85 1655.94 2208.85 2245.4 1766.15 1644.87 2465.6 1151.31 613.19 TRUE FALSE 2117.548127 1757.471423 1543.539407 2378.97601 2155.960963 1866.147887 1535.143724 2444.043519 1270.992795 689.1566065 3.072666077 2.550177139 2.239751302 3.452010743 3.128404985 2.707872012 2.227568754 3.546426887 1.844272815 1 9.428688053 -8.50934355 5.445792063 1.001322462 2.832539203 0.664600405 0.430773116 0.083344526 9.568019803 0.414390662 0.107595163 3.09E-09 8.50934355 1.831216741 KVVDYSQFQES(ph)DDADEDYGRDSGPPTK ddPTM_A459_MK2206_30min_R2 1 KVVDYSQFQESDDADEDYGRDSGPPTK 27 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDY(0.005)S(0.005)QFQES(0.988)DDADEDY(0.001)GRDS(0.001)GPPTK 46.399 0.019797 42398000 11129 28649 22908 32467 36771 25847 32239 18662 31412 18056 TRUE FALSE 11981.0448 27226.33232 23671.74129 29814.34224 35327.18578 26830.6257 28005.98057 21101.18748 34144.15898 17466.8342 0.6859311 1.558744533 1.355239365 1.706911619 2.022529405 1.536089791 1.603380456 1.208071665 1.954799513 1 14.09233053 -4.760910381 7.22445005 1.571968133 0.669000661 0.432053872 0.296074118 0.097515794 32.1854102 0.070771529 0.42961955 1.73E-05 4.760910381 -0.902967472 KVVDYSQFQES(ph)DDADEDYGRDSGPPTKK ddPTM_A459_MK2206_30min_R1 1 KVVDYSQFQESDDADEDYGRDSGPPTKK 28 3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDYS(0.001)QFQES(0.981)DDADEDY(0.015)GRDS(0.001)GPPT(0.003)KK 56.335 0.0052692 27836000 2364.2 2018 2146.7 2972.9 2651.7 1728.3 1299.3 2456.3 791.69 184.43 TRUE FALSE 2163.112375 1886.627833 2000.987985 3201.873273 2546.077174 1826.154852 1212.626068 2434.824828 873.9890086 207.2785808 10.43577376 9.101894784 9.653616778 15.44719797 12.28335877 8.810147414 5.850223709 11.74663016 4.216494562 1 7.695427232 -8.51725912 0.672869013 0.852622949 11.09647064 0.617469533 2.466352677 0.574500514 0.598384614 2.613325791 1.059796927 3.04E-09 8.51725912 10.24384769 KVYEDSGIPLPAES(ph)PK ddPTM_A459_MK2206_30min_R1 4 KVYEDSGIPLPAESPK 16 1 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK 185.59 1.38E-06 483236900 25121.4 35946.5 35745 30381.9 17173.7 16326.4 20636 20195.1 31221.7 27941.7 TRUE FALSE 22984.69301 33606.37632 33318.72899 32721.9192 16489.63516 17250.78666 19259.41009 20018.53637 34467.30744 31403.32875 0.731919001 1.070153314 1.060993542 1.041988875 0.525091951 0.549329875 0.613291994 0.637465427 1.097568596 1 14.93862987 -6.244811001 24.5969738 0.703416536 0.98902224 0.24872671 0.197990313 820.5991894 1213843.289 0.058938494 0.075862597 5.69E-07 6.244811001 0.285605704 KVYEDSGIPLPAES(ph)PK ddPTM_A459_MK2206_30min_R2 7 KVYEDSGIPLPAESPK 16 1 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 KVYEDSGIPLPAES(1)PK;KVY(0.045)EDS(0.004)GIPLPAES(0.951)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK 172.5 1.11E-05 422941000 627202 596281 631198 475516 494460 327857 647686 479530 389687 627294 TRUE FALSE 675221.0674 566670.5526 652241.8263 436664.8217 475045.0159 340333.8279 562644.0502 542206.2175 423581.2709 606825.4482 1.112710532 0.933827931 1.074842573 0.719588842 0.782836345 0.560843038 0.927192576 0.893512655 0.698028193 1 19.21092206 -5.758082123 24.99980481 0.787932891 1.029797144 0.437884938 0.125688589 80.98736774 603059.6758 0.034198372 0.056259208 1.75E-06 5.758082123 0.241864253 KVYEDSGIPLPAES(ph)PKK ddPTM_A459_MK2206_30min_R2 2 KVYEDSGIPLPAESPKK 17 2 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 KVYEDSGIPLPAES(1)PKK;KVYEDSGIPLPAES(1)PKK 67.396 0.015246 12132100 192229 190502 197380 182472 179206 127006 246290 176233 138933 220967 TRUE FALSE 206946.2 181041.9477 203960.5507 167563.4539 172169.472 131839.3023 213951.8272 199267.2582 151017.1412 213756.8649 0.968138264 0.846952671 0.954170762 0.783897415 0.805445346 0.616772249 1.000912075 0.932214543 0.706490251 1 17.70561123 -4.453832546 1.011683744 0.836049354 1.096366652 0.076465382 0.120365406 9.28574488 4.924483992 0.039181208 3.06898038 3.52E-05 4.453832546 0.260317298 KWDGS(ph)EEDEDNSK ddPTM_A459_MK2206_30min_R1 6 KWDGSEEDEDNSK 13 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KWDGS(1)EEDEDNSK;KWDGS(1)EEDEDNSK;KWDGS(1)EEDEDNSK;KWDGS(0.999)EEDEDNS(0.001)K;KWDGS(0.992)EEDEDNS(0.008)K;KWDGS(1)EEDEDNSK 153.79 0.00072199 183310100 21672.07 26349.71 27025.65 23643 18135.58 15467.77 18775.93 21656.11 22499.26 20537.72 TRUE FALSE 19828.74664 24634.33909 25191.22418 25463.98796 17413.20145 16343.54177 17523.42197 21466.77291 24838.13859 23082.08781 0.859053427 1.067249172 1.091375459 1.103192578 0.754403224 0.708061676 0.759178377 0.930018684 1.076078507 1 14.4944861 -6.254982379 24.99805628 0.854024006 1.037231184 0.272484103 0.125119262 675.6152446 2615619.584 0.039996889 0.050387604 5.56E-07 6.254982379 0.183207178 KWDGS(ph)EEDEDNSK ddPTM_A459_MK2206_30min_R2 7 KWDGSEEDEDNSK 13 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KWDGS(0.597)EEDEDNS(0.403)K;KWDGS(0.988)EEDEDNS(0.012)K;KWDGS(0.992)EEDEDNS(0.008)K;KWDGS(1)EEDEDNSK;KWDGS(1)EEDEDNSK;KWDGS(1)EEDEDNSK;KWDGS(0.989)EEDEDNS(0.011)K 213.51 5.64E-06 484010600 294569 290468 295698 264605 280955 174511 329550 248404 200255 307891 TRUE FALSE 317121.4291 276043.7815 305556.4237 242985.9251 269923.295 181152.1384 286279.6891 280871.2557 217672.8179 297844.5419 1.064721304 0.926804902 1.025892305 0.815814598 0.906255637 0.608210368 0.961171514 0.943012935 0.730826949 1 18.1842 -5.760834262 24.9999812 0.846438595 0.997906065 0.272777516 0.114459119 21.50827955 888511.1034 0.031028993 0.049863719 1.73E-06 5.760834262 0.151467471 KWDGS(ph)EEDEDNSKK ddPTM_A459_MK2206_30min_R1 1 KWDGSEEDEDNSKK 14 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KWDGS(0.993)EEDEDNS(0.007)KK 86.573 0.026177 46163000 2967.5 3159.7 3527.5 2977.2 1375.7 1763.1 2028.9 2297.2 2727.4 2255.1 TRUE FALSE 2715.098542 2954.002956 3288.063128 3206.50446 1320.902956 1862.925198 1893.555783 2277.115823 3010.92299 2534.478813 1.071265038 1.16552679 1.29733305 1.265153389 0.521173406 0.735032855 0.747118411 0.898455261 1.18798507 1 11.30747339 -6.232968714 24.9391174 0.832495039 1.204335385 0.492435073 0.174370965 610.2883765 534587.1491 0.054299857 0.070087877 5.85E-07 6.232968714 0.371840346 KWDGS(ph)EEDEDNSKK ddPTM_A459_MK2206_30min_R2 2 KWDGSEEDEDNSKK 14 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KWDGS(0.979)EEDEDNS(0.021)KK;KWDGS(0.996)EEDEDNS(0.004)KK 102.5 0.0085245 141950000 68892 62131 59851 55592 58609 24994.6 62958 51516 40146 66050 TRUE FALSE 74166.42449 59045.66489 61846.40247 51049.95577 56307.71617 25945.78702 54691.53897 58249.31808 43637.82651 63894.79391 1.16075849 0.924107604 0.967941184 0.79896894 0.881256715 0.406070439 0.855962366 0.911644197 0.682963726 1 15.96341077 -4.862733643 0.894576 0.774030377 1.300547957 0.330559443 0.157395426 2.355116808 1.601876495 0.056633395 1.188306986 1.37E-05 4.862733643 0.52651758 KWDGSEEDEDNS(ph)K ddPTM_A459_MK2206_30min_R1 1 KWDGSEEDEDNSK 13 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KWDGS(0.122)EEDEDNS(0.878)K 147.39 0.0010319 3394300 1892.7 2072.3 2217.4 1603.8 1526.2 1510.5 1365.2 1641.2 1785.4 1560.4 TRUE FALSE 1731.715926 1937.392893 2066.889066 1727.324954 1465.408222 1596.023205 1274.129999 1626.851161 1970.998719 1753.714132 0.987456219 1.104737002 1.178578098 0.984952406 0.835602676 0.910081737 0.726532321 0.927660404 1.123899661 1 10.77619788 -5.980882094 7.069949126 0.906929437 1.090931167 0.334304962 0.106023938 0.175475153 38.23795252 0.031229742 0.045574241 1.05E-06 5.980882094 0.18400173 KWPQGAVPQLPPS(ph)APATSEMTTTPERPR ddPTM_A459_MK2206_30min_R1 1 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.309)APAT(0.079)S(0.079)EMT(0.178)T(0.178)T(0.178)PERPR 49.618 0.03448 25789000 3002.5 2697.4 3042.2 2616 2954.9 2589.1 2864.4 3222.8 2733.3 2804.9 TRUE FALSE 2747.121608 2521.79877 2835.70394 2817.484773 2837.200076 2735.692605 2673.321102 3194.623399 3017.436316 3152.392188 0.871440305 0.799963526 0.89954034 0.893760866 0.900014943 0.867814803 0.848029351 1.01339656 0.957189378 1 11.62223132 -7.760533571 25 0.988969745 0.86933795 0.76643294 0.030743597 11.76902144 324852.8258 0.016102606 0.008604203 1.74E-08 7.760533571 -0.119631795 KWPQGAVPQLPPS(ph)APATSEMTTTPERPR ddPTM_A459_MK2206_30min_R2 2 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.214)APAT(0.157)S(0.157)EMT(0.157)T(0.157)T(0.157)PERPR;KWPQGAVPQLPPS(0.237)APAT(0.153)S(0.153)EMT(0.153)T(0.153)T(0.153)PERPR 71.052 0.001805 48863000 69900 91661 81955 91764 97602 92645 96626 75218 87583 85592 TRUE FALSE 75251.59774 87109.24803 84687.3388 84266.58766 93769.65507 96170.67039 83938.89013 85049.25086 95200.81103 82799.14005 0.908845161 1.052054985 1.02280457 1.017722981 1.132495519 1.16149359 1.013765241 1.027175534 1.149780191 1 16.33732816 -3.695711812 0.933431961 1.074757681 2.55E-11 0.393395409 0.057874989 14.22379925 2.077427408 0.019557954 24.81338583 0.000201506 3.695711812 -1.074757681 KWPQGAVPQLPPSAPAT(ph)SEMTTTPERPR ddPTM_A459_MK2206_30min_R1 1 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.031)APAT(0.194)S(0.194)EMT(0.194)T(0.194)T(0.194)PERPR 73.649 0.00051127 17413000 1213.8 1455.8 1639.7 1257.4 1345.3 1457 1353.3 1350.5 1170 1239.2 TRUE FALSE 1110.559936 1361.027155 1528.401732 1354.245166 1291.713852 1539.494081 1263.023826 1338.692721 1291.625687 1392.721451 0.797402765 0.977242904 1.097420974 0.972373309 0.927474658 1.105385488 0.906874684 0.961206363 0.927411354 1 10.44369103 -4.764777932 6.010313699 0.987886185 0.790777222 0.440715131 0.06386316 0.122200207 17.1285641 0.015928233 0.099253297 1.72E-05 4.764777932 -0.197108963 KWPQGAVPQLPPSAPAT(ph)SEMTTTPERPR ddPTM_A459_MK2206_30min_R2 2 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.155)APAT(0.204)S(0.16)EMT(0.16)T(0.16)T(0.16)PERPR;KWPQGAVPQLPPS(0.033)APAT(0.23)S(0.184)EMT(0.184)T(0.184)T(0.184)PERPR 71.052 0.00017984 44335700 149688 193251 188875 187743 200311 203711 207830 147246 182334 182128 TRUE FALSE 161148.2284 183654.4364 195171.9982 172403.7963 192445.7837 211463.3649 180541.6714 166491.5578 198193.0817 176185.1783 0.914652583 1.042394361 1.107766273 0.978537457 1.092292698 1.200233566 1.024726785 0.944980499 1.124913478 1 17.42673304 -4.771452668 4.410649878 1.06023716 0.90322566 0.263031804 0.072068525 0.284411712 11.86003362 0.018421095 0.140732132 1.69E-05 4.771452668 -0.157011499 KWPQGAVPQLPPSAPATS(ph)EMTTTPERPR ddPTM_A459_MK2206_30min_R2 1 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.093)APAT(0.069)S(0.209)EMT(0.209)T(0.209)T(0.209)PERPR 61.111 0.0039592 8038300 15813 23292 22166 21108 23827 24071 22403 14402 19092 20357 TRUE FALSE 17023.65544 22135.35315 22905.00338 19383.40888 22891.43226 24987.03877 19461.45919 16284.39085 20752.58765 19692.75276 0.864462965 1.124035498 1.163118415 0.984291486 1.162429272 1.268844386 0.988254889 0.826923034 1.053818524 1 14.26537717 -7.505928296 24.68789579 0.945740248 1.099688341 0.223272369 0.115998417 831.2990684 1210771.706 0.049536054 0.032472143 3.12E-08 7.505928296 0.153948093 KWPQGAVPQLPPSAPATSEMT(ph)TTPERPR ddPTM_A459_MK2206_30min_R1 1 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.026)APAT(0.031)S(0.121)EMT(0.274)T(0.274)T(0.274)PERPR 82.988 5.95E-05 93907000 7601.9 7438.2 7293.1 6241.2 7547.3 6621.3 7353.4 6746.3 6531.8 5655 TRUE FALSE 6955.318486 6953.971828 6798.064692 6721.898305 7246.675059 6996.192284 6862.868103 6687.31781 7210.803984 6355.584093 1.094363379 1.094151494 1.069620761 1.057636593 1.140205991 1.100794542 1.079817056 1.05219563 1.134561966 1 12.633809 -10.71085787 4.115067203 0.999962405 1.090131303 0.49552868 0.027661205 1.04E-05 2.06E-06 0.026779637 0.00649206 1.95E-11 10.71085787 0.090168898 KWPQGAVPQLPPSAPATSEMTT(ph)TPERPR ddPTM_A459_MK2206_30min_R2 1 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.092)APAT(0.092)S(0.092)EMT(0.092)T(0.315)T(0.315)PERPR 51.301 0.0097095 10156000 25166 36220 33991 32011 31445 35168 35687 22690 33316 36232 TRUE FALSE 27092.72831 34421.36747 35124.24297 29395.5989 30210.3113 36506.34288 31001.25403 25655.66091 36213.76546 35049.75281 0.772979155 0.982071619 1.002125269 0.83868206 0.861926515 1.041557785 0.884492801 0.731978369 1.033210296 1 15.09711665 KY(ph)CLTCR ddPTM_A459_MK2206_30min_R2 1 KYCLTCR 7 1 O14647;A0A0D9SEU0;O14647-2 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 1 KY(1)CLTCR 73.975 0.046446 0 0 557.8 0 420.61 569.05 0 511.2 0 671.28 542.37 TRUE FALSE 0 530.1004631 0 386.2448175 546.7062378 0 444.0788259 0 729.666721 524.6725113 0 1.010345409 0 0.736163624 1.041995199 0 0.8463924 0 1.390708881 1 9.035273396 -8.276459354 24.98679851 1.195354536 0.484652874 0.326507752 0.423907641 1045.62167 1739448.76 0.371155355 0.097388208 5.29E-09 8.276459354 -0.710701661 KY(ph)IFS(ph)VR ddPTM_A459_MK2206_30min_R1 2 KYIFSVR 7 1 E9PIN0;Q13315 E9PIN0 ATM Serine-protein kinase ATM 2 KY(1)IFS(1)VR;KY(1)IFS(1)VR 97.602 0.009421 29777000 7489.7 6640.7 6928.8 6278.5 7943.1 6590.2 7661.2 7389.4 6174.9 6199.3 TRUE FALSE 6852.661685 6208.389223 6458.492361 6762.071158 7626.709507 6963.331429 7150.135327 7324.795255 6816.802952 6967.316086 0.983543964 0.891073284 0.926969909 0.970541752 1.094640951 0.999428093 1.02623955 1.051308016 0.978397258 1 12.7663873 -6.019902077 6.718415491 1.027054329 0.932295713 0.56086574 0.036582727 0.112297478 22.00795139 0.010290571 0.014014869 9.55E-07 6.019902077 -0.094758615 KY(ph)IGPCGGR ddPTM_A459_MK2206_30min_R1 1 KYIGPCGGR 9 1 A0A2R8Y548;P53420 A0A2R8Y548 COL4A4 Collagen alpha-4(IV) chain 1 KY(1)IGPCGGR 71.379 0.038434 185150000 6150.6 6830.3 6592.3 6259.9 6507.2 5282.5 6788.6 5946.5 5582 4800 TRUE FALSE 5627.459172 6385.646229 6144.833043 6742.038583 6248.004445 5581.590585 6335.744881 5894.510377 6162.268875 5394.660238 1.043153586 1.183697573 1.139058397 1.249761484 1.158183123 1.034650995 1.174447435 1.092656463 1.142290451 1 12.39731638 -6.57498817 24.98231201 1.099559536 1.161107284 0.185511798 0.066615402 179.9879734 86288.61177 0.021361552 0.021361555 2.66E-07 6.57498817 0.061547749 KY(ph)IGPCGGR ddPTM_A459_MK2206_30min_R2 1 KYIGPCGGR 9 1 A0A2R8Y548;P53420 A0A2R8Y548 COL4A4 Collagen alpha-4(IV) chain 1 KY(1)IGPCGGR 71.501 0.038237 6226700 17799 20449 16563 22079 18653 16860 21146 18298 21125 16455 TRUE FALSE 19161.70513 19433.5324 17115.20215 20275.07507 17920.5895 17501.61911 18369.5048 20689.61143 22962.41431 15918.0747 1.203770273 1.220846916 1.075205543 1.27371403 1.125801319 1.099480901 1.154002927 1.299755895 1.442537163 1 13.95837823 -7.757848193 24.96075221 1.27835991 1.163596699 0.078300815 0.116343413 155.6079083 1081584.49 0.054328594 0.029769717 1.75E-08 7.757848193 -0.114763211 KY(ph)KIQY(ph)EKMK ddPTM_A459_MK2206_30min_R1 1 KYKIQYEKMK 10 3 A0A087X1N7;P20929-3;P20929-2;H0Y786;H7C2D0;P20929-4;P20929 A0A087X1N7 NEB Nebulin 2 KY(1)KIQY(1)EKMK 60.518 0.035959 0 150.32 206.65 212.78 264.35 299.85 386.57 204.05 170.91 205.1 0 TRUE FALSE 137.5344946 193.1970474 198.3370864 284.7102828 287.9063396 408.4572593 190.4381968 169.4157519 226.420879 0 0 KY(ph)LVILK ddPTM_A459_MK2206_30min_R1 1 KYLVILK 7 1 F2Z3H0 F2Z3H0 DNAJC2 1 KY(1)LVILK 122.79 0.027284 3251700 1773.6 1865.7 1992.3 1937.8 1558.2 1428.6 1587.6 1585.3 1562 1239.3 TRUE FALSE 1622.746006 1744.242591 1857.068227 2087.049692 1496.133594 1509.486097 1481.694101 1571.439889 1724.37549 1392.83384 1.165067907 1.252297683 1.333302059 1.498419719 1.074165167 1.08375174 1.063798177 1.128232129 1.238033884 1 10.44380744 -6.297444995 24.99836682 1.101986232 1.309490196 0.543215161 0.096204999 490.8798263 340812.0928 0.031149018 0.035320873 5.04E-07 6.297444995 0.207503964 KY(ph)PLS(ph)QDDINGIQSIY(ph)GGLPK ddPTM_A459_MK2206_30min_R2 1 KYPLSQDDINGIQSIYGGLPK 21 1 Q9H306 Q9H306 MMP27 Matrix metalloproteinase-27 3 KY(1)PLS(1)QDDINGIQS(0.064)IY(0.937)GGLPK 59.814 0.021006 0 5819.9 12264 8493.4 13689 9171.1 12247 12072 9878.6 9495.8 9026.2 TRUE FALSE 6265.476019 11654.98759 8776.565717 12570.56491 8810.996533 12713.06817 10486.9319 11169.76694 10321.72752 8731.675833 0.717557103 1.334793895 1.005141039 1.439650893 1.009084247 1.455971157 1.201021671 1.279223731 1.182101548 1 13.09204286 -4.753541649 24.95247553 1.222220544 0.717556166 0.455424125 0.161811309 233.6989831 738299.3636 0.03627649 0.385815967 1.76E-05 4.753541649 -0.504664378 KY(ph)QEDSDPERSDYEEQQLQKEEEAR ddPTM_A459_MK2206_30min_R2 1 KYQEDSDPERSDYEEQQLQKEEEAR 25 3 Q6P6C2-3;Q6P6C2;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 KY(0.821)QEDS(0.176)DPERS(0.002)DY(0.001)EEQQLQKEEEAR 41.296 0.029977 10033000 23007 40377 36274 39775 42552 30065 45113 31552 33452 38964 TRUE FALSE 24768.43361 38371.93689 37483.35706 36525.25527 40881.19467 31209.14464 39189.60891 35675.95473 36361.59449 37692.60787 0.657116475 1.018022871 0.994448492 0.969029667 1.084594486 0.827991121 1.039716038 0.946497384 0.964687681 1 15.20199399 -4.757469819 24.99772628 0.981163774 0.657116007 0.69896509 0.064108111 61.93296885 389959.9738 0.015034015 0.111347589 1.75E-05 4.757469819 -0.324047767 KYEDICPSTHNMDVPNIK ddPTM_A459_MK2206_30min_R2 1 KYEDICPSTHNMDVPNIK 18 1 P63241;P63241-2;I3L397;I3L504;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4;Q6IS14 P63241 EIF5A;EIF5A2;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1-like 0 73.208 0.012353 9986200 25512 54190 43874 64961 66624 61851 60135 39900 49590 49369 FALSE TRUE 27465.21834 51499.0034 45336.73726 59653.4785 64008.007 64204.78315 52239.20226 45115.067 53903.24856 47758.09357 0.575090341 1.078330384 0.949299561 1.249075791 1.34025465 1.344374918 1.093829304 0.944658038 1.128672535 1 15.54345763 -4.50187173 1.52014324 1.152616165 6.33E-15 0.584584978 0.138922179 1.812197358 2.292852516 0.042731223 3.845766537 3.15E-05 4.50187173 -1.152616165 KYEEIDNAPEER ddPTM_A459_MK2206_30min_R1 1 KYEEIDNAPEER 12 1 P49411 P49411 TUFM "Elongation factor Tu, mitochondrial" 0 104.81 0.012973 12502000 2999.9 3468 3404.2 3529.7 3271.4 3153.6 2627.9 2663.4 2759.2 2869.3 FALSE TRUE 2744.742752 3242.23257 3173.132389 3801.558106 3141.093211 3332.154107 2452.597586 2640.114175 3046.028714 3224.770546 0.851143581 1.005414966 0.983987029 1.178861581 0.974051693 1.033299597 0.760549487 0.818698303 0.944572232 1 11.6549808 -7.238768108 24.76101223 0.86584652 1.010117766 0.274581589 0.096848171 822.7629923 898602.9914 0.037231352 0.028817382 5.77E-08 7.238768108 0.144271245 KYEMFAQTLQQSR ddPTM_A459_MK2206_30min_R1 1 KYEMFAQTLQQSR 13 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 103.14 0.014057 0 2844.9 2975.1 2479 2204.2 3062.5 2575.7 2819.1 2559 1913.9 1890.1 FALSE TRUE 2602.926316 2781.420449 2310.732387 2373.967866 2940.51414 2721.533908 2631.042983 2536.626933 2112.856754 2124.259858 1.225333288 1.309359794 1.087782353 1.117550594 1.384253499 1.281168073 1.238569271 1.194122708 0.994631964 1 11.05274454 -8.211293364 3.574571139 0.990718937 1.234149748 0.571111438 0.081120232 0.18113575 4.491213196 0.072808011 0.022675191 6.15E-09 8.211293364 0.243430811 KYEQGFITDPVVLS(ph)PK ddPTM_A459_MK2206_30min_R1 2 KYEQGFITDPVVLSPK 16 1 P12268;H0Y4R1 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 1 KYEQGFITDPVVLS(1)PK;KYEQGFITDPVVLS(1)PK 140.32 0.00020527 28139000 9782.6 12734.4 12832.6 10946.4 7590 7849 9860.6 9362 12408.1 10855.3 TRUE FALSE 8950.5385 11905.38825 11961.55887 11789.49362 7287.674228 8293.403597 9202.817366 9280.149021 13697.9664 12200.13652 0.733642487 0.975840576 0.980444674 0.966341123 0.597343662 0.679779573 0.754320851 0.760659441 1.122771567 1 13.57460967 -10.74944238 7.432584115 1.000000292 0.836122405 0.084309823 0.156147814 7.99E-07 8.29E-08 0.159613368 0.038711859 1.78E-11 10.74944238 -0.163877887 KYEQGFITDPVVLS(ph)PK ddPTM_A459_MK2206_30min_R2 1 KYEQGFITDPVVLSPK 16 1 P12268;H0Y4R1 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 1 KYEQGFITDPVVLS(1)PK 137.73 0.00020869 6688800 144260 126530 135250 108570 113830 82894 150060 105520 108040 138940 TRUE FALSE 155304.6565 120246.7042 139759.1675 99699.4837 109360.4623 86048.58926 130356.9417 119311.8263 117437.1239 134406.3992 1.155485583 0.894650143 1.039825249 0.741776317 0.813655175 0.640211997 0.969871543 0.887694537 0.873746523 1 17.0362423 -3.702323205 0.961311422 0.848012231 2.982450686 0.361165352 0.113182762 14.38275039 2.158680521 0.036972246 51.64237217 0.000198462 3.702323205 2.134438455 KYES(ph)DEDSLGSSGR ddPTM_A459_MK2206_30min_R2 1 KYESDEDSLGSSGR 14 1 O00418 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 KYES(0.999)DEDS(0.001)LGSSGR 127.07 0.0022377 18310000 34843 53028 43308 55614 47000 32989 53365 44888 39421 46980 TRUE FALSE 37510.60687 50394.70663 44751.8671 51070.1583 45154.54384 34244.41951 46358.1114 50755.01572 42849.76732 45447.04645 0.825369519 1.108866485 0.984703531 1.123728873 0.993563881 0.753501541 1.020046736 1.116794593 0.942850431 1 15.47189892 -7.498471633 24.99325828 1.031577716 0.973067203 0.047999541 0.113071299 2591.911908 2654167.78 0.048905664 0.032777372 3.17E-08 7.498471633 -0.058510514 KYESDEDS(ph)LGSSGR ddPTM_A459_MK2206_30min_R1 1 KYESDEDSLGSSGR 14 1 O00418 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 KYES(0.03)DEDS(0.467)LGS(0.326)S(0.177)GR 140.77 0.0010052 6984200 1361.6 1493 1551.9 1356.3 1289.1 1219.2 1529.6 1369.8 1127 1136.1 TRUE FALSE 1245.78877 1395.805429 1446.561352 1460.762461 1237.752417 1288.23005 1427.563175 1357.823983 1244.155683 1276.848645 0.975674583 1.093164357 1.132915289 1.144037288 0.969380687 1.008913668 1.118036331 1.063418118 0.974395585 1 10.31837181 -6.257716371 24.99645891 1.029640065 1.090246725 0.214154346 0.058987662 581.9937103 3907531.429 0.018718205 0.023209976 5.52E-07 6.257716371 0.06060666 KYGGPPPDSVYSGQQPS(ph)VGTEIFVGK ddPTM_A459_MK2206_30min_R2 1 KYGGPPPDSVYSGQQPSVGTEIFVGK 26 1 O60506-2;O60506;O60506-4;O60506-3;B7Z645;F6UXX1 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 1 KYGGPPPDSVY(0.002)S(0.026)GQQPS(0.761)VGT(0.211)EIFVGK 88.168 0.00090898 0 5262.3 7934.2 6130.2 8213.4 9983.5 6270.2 7983.9 7830.4 7068.7 6841.7 TRUE FALSE 5665.185734 7540.199165 6334.577808 7542.338947 9591.497627 6508.816855 6935.60434 8853.860166 7683.522749 6618.455889 0.855967892 1.139268629 0.95710811 1.139591934 1.449204737 0.983434348 1.047918798 1.337753143 1.160923768 1 12.69227895 -3.915887598 0.834451168 1.163887223 5.21E-11 0.230439602 0.149661081 13.29517903 2.475089088 0.053653406 20.06676642 0.00012137 3.915887598 -1.163887223 KYGGSVGSQPPPVAPEPGPVPS(ph)SPSQEPPTKR ddPTM_A459_MK2206_30min_R1 1 KYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR 32 2 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 KYGGSVGSQPPPVAPEPGPVPS(0.408)S(0.408)PS(0.168)QEPPT(0.015)KR 93.751 1.37E-08 28442000 5017.8 4388.9 4371.8 3573.9 3745.4 3853.6 4075.4 4042.1 3291.5 2846.7 TRUE FALSE 4591.00976 4103.181812 4075.054397 3849.162397 3596.212787 4071.787502 3803.537502 4006.760346 3633.663204 3199.370687 1.434972752 1.282496532 1.273704986 1.203099851 1.124037549 1.272683881 1.188839267 1.252358897 1.135743107 1 11.64357244 -1.522878745 0.053711525 0.654273944 2.312395395 0.686362533 0.062031848 279.6267699 1.13391552 7.807188921 37.53078929 0.03 1.522878745 1.658121451 KYGGSVGSQPPPVAPEPGPVPSS(ph)PSQEPPTKR ddPTM_A459_MK2206_30min_R1 1 KYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR 32 2 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 KYGGSVGSQPPPVAPEPGPVPS(0.211)S(0.564)PS(0.211)QEPPT(0.013)KR 106.72 3.88E-12 25615000 10907 10915 9545.6 8849.6 10193 9167.9 9246 9432.4 8319.8 6178.5 TRUE FALSE 9979.302375 10204.43152 8897.671268 9531.197725 9786.991226 9686.978575 8629.21621 9349.933521 9184.672983 6943.939225 1.437124095 1.46954505 1.281357883 1.372592331 1.409429275 1.395026405 1.242697542 1.346488386 1.322689137 1 12.76153861 -13.47303774 0.188296932 6.16E-13 1.438200121 0.80224865 0.056680389 38.71947689 0.538199743 14.86556462 0.169002423 3.36E-14 13.47303774 1.438200121 KYGGSVGSQPPPVAPEPGPVPSS(ph)PSQEPPTKR ddPTM_A459_MK2206_30min_R2 1 KYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR 32 2 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 KYGGSVGSQPPPVAPEPGPVPS(0.247)S(0.688)PS(0.061)QEPPT(0.004)KR 117.83 5.81E-17 20963000 30266 41814 35299 39584 42788 37556 39975 26533 32040 39872 TRUE FALSE 32583.18823 39737.57756 36475.85104 36349.86058 41107.92813 38985.2199 34726.23448 30000.9542 34826.78128 38570.97991 0.844759151 1.030245476 0.945681212 0.942414755 1.065773497 1.01073968 0.900320255 0.777811564 0.902927055 1 15.23522818 -10.24213414 4.486281243 1.0000001 0.939264835 0.050928934 0.082022717 122229991.4 302798390.4 235.0998526 0.022228407 5.73E-11 10.24213414 -0.060735265 KYILGNPLTPGVT(ph)QGPQIDKEQYDK ddPTM_A459_MK2206_30min_R1 2 KYILGNPLTPGVTQGPQIDKEQYDK 25 2 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 KYILGNPLT(0.046)PGVT(0.945)QGPQIDKEQY(0.009)DK;KYILGNPLT(0.069)PGVT(0.93)QGPQIDKEQY(0.001)DK 78.976 0.00029366 26260000 4475.9 5545.7 4876.9 4950.7 4800.5 3940.6 4521.5 4580.9 3892.8 3128.1 TRUE FALSE 4095.201201 5184.673922 4545.869616 5332.003772 4609.28592 4163.713367 4219.878985 4540.849674 4297.470491 3515.632644 1.164854698 1.474748487 1.293044546 1.516655553 1.311082922 1.18434256 1.200318524 1.291616655 1.222388948 1 11.77956861 -6.626201061 4.558253791 1.199946848 1.370577118 0.361273906 0.114063555 0.2453801 8.806459023 0.036575077 0.036505504 2.36E-07 6.626201061 0.17063027 KYILGNPLTPGVTQGPQIDKEQYDK ddPTM_A459_MK2206_30min_R1 1 KYILGNPLTPGVTQGPQIDKEQYDK 25 2 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 131.41 3.63E-08 10454000 6216.2 6005 7737.2 6592.8 6001.8 5343.2 6298.2 6046.2 5833.3 4365.1 FALSE TRUE 5687.479547 5614.073409 7212.020421 7100.578598 5762.735597 5645.727366 5878.05857 5993.338711 6439.69241 4905.881543 1.159318564 1.14435568 1.470076348 1.447360385 1.174658529 1.150807927 1.198165614 1.221663968 1.312647351 1 12.26029668 KYQEDS(ph)DPERSDYEEQQLQK ddPTM_A459_MK2206_30min_R2 1 KYQEDSDPERSDYEEQQLQK 20 2 Q6P6C2-3;Q6P6C2;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 KY(0.33)QEDS(0.399)DPERS(0.257)DY(0.014)EEQQLQK 55.912 0.016888 14491000 67967 57423 51768 59066 63921 49975 72897 48369 39878 67861 TRUE FALSE 73170.60578 54571.45732 53493.91928 54240.11886 61411.14036 51876.83364 63325.53634 54690.99438 43346.51636 65646.70113 1.114612075 0.83129017 0.81487597 0.826242872 0.935479458 0.790242811 0.964641562 0.833111085 0.660299994 1 16.00243489 -4.7592706 24.99153587 0.847910785 1.114612419 0.424188356 0.092198136 54.02301915 622375.8763 0.021973014 0.141240493 1.74E-05 4.7592706 0.266701635 KYS(ph)ASSGGLCEEATAAK ddPTM_A459_MK2206_30min_R1 2 KYSASSGGLCEEATAAK 17 1 Q9UHV7;J3QRB7 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 1 KY(0.065)S(0.907)AS(0.023)S(0.005)GGLCEEATAAK;KY(0.002)S(0.902)AS(0.087)S(0.009)GGLCEEATAAK 97.623 0.0028323 12337000 11017.3 11391.1 11566.3 10264 9871.9 9143.9 9566.1 9918.2 9382.8 9357.8 TRUE FALSE 10080.22078 10649.53732 10781.21178 11054.53506 9478.681319 9661.619716 8927.962923 9831.486223 10358.17564 10517.11491 0.958458747 1.012591134 1.025111152 1.051099579 0.901262504 0.918656856 0.848898486 0.934808292 0.984887559 1 13.36045137 -6.267788233 24.97576329 0.923395234 1.012820295 0.425549049 0.045181337 464.1978194 1826105.143 0.014217483 0.016487268 5.40E-07 6.267788233 0.089425061 KYS(ph)ASSGGLCEEATAAK ddPTM_A459_MK2206_30min_R2 2 KYSASSGGLCEEATAAK 17 1 Q9UHV7;J3QRB7 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 1 KY(0.105)S(0.664)AS(0.171)S(0.06)GGLCEEATAAK;KY(0.016)S(0.935)AS(0.047)S(0.002)GGLCEEATAAK 95.742 0.0032201 34061000 135949 158814 136697 141841 131287 100795 136752 102211 102081 110185 TRUE FALSE 146357.36 150927.5277 141254.4098 130252.1366 126132.0127 104630.8244 118796.2981 115570.3286 110959.8209 106589.6725 1.373091375 1.415967647 1.32521666 1.221995842 1.18334178 0.981622534 1.114519778 1.084254468 1.040999736 1 16.70170814 -6.049274096 1.148363702 1.051653885 1.403353258 0.90435764 0.045871785 0.139157183 0.374775856 0.017889298 0.033475325 8.93E-07 6.049274096 0.351699372 KYS(ph)EVDDSLPSGGEKPSK ddPTM_A459_MK2206_30min_R2 2 KYSEVDDSLPSGGEKPSK 18 2 Q05D32;H0YMH7;Q05D32-2;H0YNU2;H0YNW9 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 KYS(1)EVDDSLPSGGEKPSK;KY(0.008)S(0.99)EVDDS(0.002)LPSGGEKPSK 107.07 0.0018264 15480500 102558 72165 75405 68072 47922 33906.6 70119 48202 31727.1 56344 TRUE FALSE 110409.9193 68581.39104 77918.96506 62510.29985 46040.34149 35196.93942 60912.29107 54502.1669 34486.66581 54505.49989 2.025665658 1.258247171 1.429561516 1.146862243 0.844691666 0.645750236 1.117543939 0.99993885 0.632719008 1 15.73411419 -1.522878747 0.505777208 0.860689337 37.75977749 0.766513682 0.187261616 53.65569691 0.561062532 0.104516785 2109.583156 0.03 1.522878747 36.89908816 up KYSDVEVPASVTGYS(ph)FASDGDSGTCSPLR ddPTM_A459_MK2206_30min_R1 1 KYSDVEVPASVTGYSFASDGDSGTCSPLR 29 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 KYSDVEVPASVT(0.001)GY(0.013)S(0.831)FAS(0.142)DGDS(0.005)GT(0.002)CS(0.006)PLR 113.62 9.89E-12 16659000 7122.8 6105.2 7137.4 5608.2 7521.7 6288.8 6750.7 6657.3 5803.3 5026.5 TRUE FALSE 6516.968457 5707.75037 6652.933174 6040.144536 7222.094762 6644.866421 6300.37312 6599.095928 6406.573802 5649.220768 1.153604846 1.010360651 1.177672718 1.069199591 1.278423177 1.176244777 1.115264101 1.168142687 1.134063274 1 12.46383617 -4.424164177 22.56057065 1.133441934 4.554722322 0.002232258 0.079640316 7486.226594 1644539.758 0.0187447 51325.71493 3.77E-05 4.424164177 3.421280388 KYSDVEVPASVTGYSFASDGDS(ph)GTCSPLR ddPTM_A459_MK2206_30min_R2 1 KYSDVEVPASVTGYSFASDGDSGTCSPLR 29 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 KYSDVEVPASVTGYSFAS(0.009)DGDS(0.439)GT(0.439)CS(0.112)PLR 96.751 8.12E-08 6388300 58252 78239 72653 86158 85329 89563 101490 75798 75323 75035 TRUE FALSE 62711.81791 74353.76503 75075.21476 79118.61579 81978.55472 92971.38272 88164.24109 85705.05885 81874.45839 72586.6141 0.86395844 1.024345411 1.034284567 1.089989067 1.12938943 1.280833717 1.214607434 1.180728154 1.127955332 1 16.1474159 -5.02349397 0.815407769 1.172267338 0.784140988 0.589647948 0.072915978 1.249826884 0.813011853 0.028744255 0.410999094 9.47E-06 5.02349397 -0.38812635 KYSDVEVPASVTGYSFASDGDSGTCS(ph)PLR ddPTM_A459_MK2206_30min_R1 1 KYSDVEVPASVTGYSFASDGDSGTCSPLR 29 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 KYSDVEVPASVTGYS(0.002)FAS(0.069)DGDS(0.211)GT(0.202)CS(0.517)PLR 119.38 2.56E-09 0 1522.9 1211.4 1376.3 1351.3 1737.3 1198.7 1441.5 1316.6 965.66 996.61 TRUE FALSE 1393.369358 1132.53764 1282.880591 1455.37736 1668.099662 1266.569358 1345.340165 1305.089105 1066.043813 1120.077571 1.243993625 1.011124291 1.145349772 1.299354079 1.489271552 1.13078718 1.201113387 1.16517743 0.951758914 1 10.12938293 -8.158960967 3.496276804 0.974110074 1.21556454 0.393453233 0.117768973 0.278609107 6.008329693 0.10346844 0.03367052 6.93E-09 8.158960967 0.241454466 KYSDVEVPASVTGYSFASDGDSGTCS(ph)PLR ddPTM_A459_MK2206_30min_R2 1 KYSDVEVPASVTGYSFASDGDSGTCSPLR 29 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 KYSDVEVPASVTGYSFAS(0.004)DGDS(0.261)GT(0.185)CS(0.55)PLR 113.97 6.52E-12 6647300 30822 45781 37288 51239 45224 44536 50686 38116 37766 48141 TRUE FALSE 33181.75602 43507.58211 38531.16331 47052.60979 43448.27853 46230.84869 44030.86732 43097.89207 41050.81841 46570.16311 0.712511054 0.934237271 0.827378749 1.010359566 0.932963847 0.992713909 0.945473762 0.925440007 0.881483243 1 15.50711831 -4.091945939 1.199775781 0.945623051 1.98E-14 0.613998491 0.053400305 4.498711754 1.68023978 0.015328369 7.937002274 8.09E-05 4.091945939 -0.945623051 KYSSSS(ph)LSHMGAYSR ddPTM_A459_MK2206_30min_R1 1 KYSSSSLSHMGAYSR 15 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KY(0.074)S(0.24)S(0.24)S(0.086)S(0.355)LS(0.004)HMGAYSR 64.5 0.035279 12805000 1630.3 836.64 936.61 838.27 1611.9 1212.9 1324.3 1166.2 591.16 971.91 TRUE FALSE 1491.634424 782.1745839 873.0355227 902.8337006 1547.69461 1281.57335 1235.958363 1156.004036 652.6131975 1092.317548 1.365568489 0.716068862 0.799250661 0.826530437 1.416890731 1.17326079 1.131500968 1.058304005 0.597457395 1 10.09317661 -8.224251692 23.75586166 0.798728621 1.050854314 0.162841074 0.2369172 535.5974444 342145.845 0.16701447 0.063120081 5.97E-09 8.224251692 0.252125694 KYTELPHGAISEDQAVGPADIPCDSTGQT(ph)ST ddPTM_A459_MK2206_30min_R1 1 KYTELPHGAISEDQAVGPADIPCDSTGQTST 31 1 Q9H773;H3BPN2;H3BSA6 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 KYTELPHGAISEDQAVGPADIPCDS(0.036)T(0.036)GQT(0.339)S(0.294)T(0.294) 86.009 1.57E-06 13652000 866.85 865.68 912.18 543.42 1045.7 899.3 870.14 687.75 859.74 644.18 TRUE FALSE 793.1198555 809.3240747 850.2637631 585.2743026 1004.047555 950.2175888 812.0945483 681.7370743 949.1130496 723.9858817 1.095490776 1.117872731 1.174420364 0.808405685 1.386833059 1.312480827 1.121699426 0.941644156 1.310955191 1 9.499817754 -4.439772805 14.80532449 1.131818242 0.47809057 0.003729412 0.17029718 1688053.086 5777192.019 0.042343033 34847139.28 3.63E-05 4.439772805 -0.653727671 KYTELPHGAISEDQAVGPADIPCDSTGQTS(ph)T ddPTM_A459_MK2206_30min_R1 1 KYTELPHGAISEDQAVGPADIPCDSTGQTST 31 1 Q9H773;H3BPN2;H3BSA6 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 KYTELPHGAISEDQAVGPADIPCDS(0.006)T(0.006)GQT(0.148)S(0.42)T(0.42) 89.135 4.17E-07 6812500 1268.3 1221.7 993.25 927.93 1209.6 1157.6 1423 1239.7 908.29 1045.3 TRUE FALSE 1160.424425 1142.167108 925.8309574 999.3993294 1161.419071 1223.142312 1328.074266 1228.861434 1002.709996 1174.799656 0.987763675 0.972222883 0.788075612 0.85069767 0.988610326 1.041149702 1.130468723 1.04601787 0.853515739 1 10.19819903 -6.434723039 4.959839658 1.023624096 0.89760106 0.295083023 0.083489574 0.286239115 11.80092688 0.02832373 0.031899541 3.68E-07 6.434723039 -0.126023036 KYTELPHGAISEDQAVGPADIPCDSTGQTS(ph)T ddPTM_A459_MK2206_30min_R2 2 KYTELPHGAISEDQAVGPADIPCDSTGQTST 31 1 Q9H773;H3BPN2;H3BSA6 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 KYTELPHGAISEDQAVGPADIPCDS(0.011)T(0.011)GQT(0.055)S(0.461)T(0.461);KYTELPHGAISEDQAVGPADIPCDS(0.002)T(0.003)GQT(0.059)S(0.508)T(0.429) 85.331 6.96E-07 22666000 94639 123774 114944 143907 132387 143921 145925 120027 117752 124396 TRUE FALSE 101884.6346 117627.5631 118776.1756 132149.3378 127188.8212 149398.0145 126764.8722 135714.941 127993.8561 120336.9687 0.846661136 0.977484844 0.987029812 1.098160766 1.056938882 1.24149724 1.053415867 1.127790923 1.063628721 1 16.8767204 -4.978661426 0.976956442 1.103114682 0.777152818 0.588516661 0.063545472 0.992834168 0.939213926 0.021078796 0.319104603 1.05E-05 4.978661426 -0.325961863 KYTELPHGAISEDQAVGPADIPCDSTGQTST(ph) ddPTM_A459_MK2206_30min_R2 1 KYTELPHGAISEDQAVGPADIPCDSTGQTST 31 1 Q9H773;H3BPN2;H3BSA6 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 KYTELPHGAISEDQAVGPADIPCDS(0.022)T(0.062)GQT(0.181)S(0.181)T(0.553) 47.12 0.030938 5653700 7339.1 6756.4 7060.6 10906 9249.6 8334.4 8467.5 8893.3 7967.2 8392.8 TRUE FALSE 7900.987139 6420.887001 7295.99688 10014.94491 8886.414228 8651.571432 7355.707079 10055.68485 8660.172655 8118.943623 0.973154576 0.790852517 0.898638692 1.233528077 1.094528382 1.065603092 0.905993122 1.238545963 1.066662494 1 12.98707631 -5.633829343 8.201675223 1.088003098 0.873051232 0.447259255 0.101270126 0.205704953 14.007671 0.027242309 0.047290535 2.32E-06 5.633829343 -0.214951866 KYTLENKEEGSLS(ph)DTEADAVSGQLPDPTTNPSAGK ddPTM_A459_MK2206_30min_R1 1 KYTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGK 35 2 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 KY(0.001)T(0.001)LENKEEGS(0.012)LS(0.669)DT(0.232)EADAVS(0.084)GQLPDPT(0.001)T(0.001)NPSAGK 55.09 0.00030599 61539000 5248.5 6324.4 5968.5 5879 4374.8 3905.3 4808.4 5622.8 4384.2 3694 TRUE FALSE 4802.087514 5912.68041 5563.374849 6331.801599 4200.542452 4126.414711 4487.640409 5573.640452 4839.953279 4151.640608 1.156672257 1.424179251 1.340042497 1.525132399 1.01177892 0.993923873 1.080931813 1.342515159 1.165792932 1 12.01946585 -6.270152297 24.94651675 1.110109946 1.364450071 0.497008553 0.12900012 578.1170379 1655241.616 0.041991618 0.048331644 5.37E-07 6.270152297 0.254340125 KYTLENKEEGSLS(ph)DTEADAVSGQLPDPTTNPSAGK ddPTM_A459_MK2206_30min_R2 1 KYTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGK 35 2 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 KY(0.069)T(0.075)LENKEEGS(0.291)LS(0.38)DT(0.109)EADAVS(0.075)GQLPDPTTNPSAGK 49.623 0.0039523 39436000 143340 221300 190780 213850 225470 143120 248280 180750 183160 219000 TRUE FALSE 154314.2206 210310.5638 197140.51 196377.7709 216616.9149 148566.5319 215680.5378 204374.6456 199090.9257 211854.0479 0.728398735 0.992714399 0.930548705 0.926948401 1.022481831 0.701268318 1.018061915 0.964695495 0.939755118 1 17.69271117 -4.752411319 24.98871199 0.939169601 0.728398327 0.350379898 0.087866339 406.8318333 1125984.788 0.021187733 0.253364979 1.77E-05 4.752411319 -0.210771274 KYTLENKEEGSLSDT(ph)EADAVSGQLPDPTTNPSAGK ddPTM_A459_MK2206_30min_R1 1 KYTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGK 35 2 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 KYTLENKEEGS(0.005)LS(0.196)DT(0.723)EADAVS(0.076)GQLPDPTTNPSAGK 84.971 1.63E-08 87706000 8369.9 9804.3 10135 8494.7 8026 7016.2 7402.6 8472.3 7425.9 6031.5 TRUE FALSE 7657.996053 9166.038288 9447.064438 9148.963266 7706.307425 7413.451181 6908.786061 8398.227574 8197.848879 6778.727756 1.129709929 1.352176783 1.393633847 1.34965787 1.136836838 1.093634595 1.019186241 1.238909111 1.209349184 1 12.72679882 -6.290111479 8.204444376 1.121988149 1.315812027 0.486289542 0.095354628 0.250900875 65.45505604 0.03049136 0.035068841 5.13E-07 6.290111479 0.193823878 KYTLENKEEGSLSDT(ph)EADAVSGQLPDPTTNPSAGK ddPTM_A459_MK2206_30min_R2 1 KYTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGK 35 2 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 KY(0.004)T(0.005)LENKEEGS(0.022)LS(0.203)DT(0.666)EADAVS(0.1)GQLPDPTTNPSAGK 51.595 0.0075179 9873200 47403 69120 58084 58302 69798 49919 70245 56439 55759 64437 TRUE FALSE 51032.21013 65687.60131 60020.49157 53538.5401 67057.37981 51818.70252 61021.74712 63815.77108 60608.81703 62334.42597 0.818684208 1.053793314 0.962878708 0.858892005 1.075767985 0.831301511 0.97894135 1.023764478 0.972316919 1 15.92774153 -7.511210557 24.29447426 0.999095023 0.940230339 0.116177236 0.081462442 928.8670342 1934022.717 0.034143282 0.021547521 3.08E-08 7.511210557 -0.058864684 KYY(ph)GLDT(ph)K ddPTM_A459_MK2206_30min_R1 3 KYYGLDTK 8 1 Q32MZ4-4 Q32MZ4-4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 2 KYY(1)GLDT(1)K;KY(0.001)Y(0.999)GLDT(1)K;KYY(1)GLDT(1)K 124.83 0.015468 30805700 20498.8 18799.3 19338.8 16940.7 20912.1 18070.8 21504.3 18741.5 17353.8 16302 TRUE FALSE 18755.26942 17575.46215 18026.13614 18245.47565 20079.12677 19093.95308 20069.78738 18577.64504 19157.78961 18321.61483 1.023669015 0.959274732 0.983872672 0.995844297 1.095925602 1.042154485 1.095415855 1.013974216 1.045638705 1 14.16125905 -6.107423801 7.358250288 1.051444964 0.986609262 0.442226934 0.031962223 0.224718886 13.61122935 0.009112359 0.011814729 7.81E-07 6.107423801 -0.064835701 LAAAEETAVS(ph)PR ddPTM_A459_MK2206_30min_R1 6 LAAAEETAVSPR 12 0 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 1 LAAAEETAVS(1)PR;LAAAEET(0.001)AVS(0.999)PR;LAAAEETAVS(1)PR;LAAAEET(0.005)AVS(0.995)PR;LAAAEETAVS(1)PR;LAAAEETAVS(1)PR 159.58 0.0004647 636333200 9718.8 9801.8 9361.8 8302.58 10333.9 9105.7 11226.2 9844.66 9202.5 9326.8 TRUE FALSE 8892.165025 9163.701038 8726.347099 8942.04615 9922.278881 9621.256865 10477.32068 9758.589176 10159.13281 10482.2744 0.848304928 0.874209231 0.83248604 0.853063544 0.946576907 0.917859665 0.99952742 0.93096105 0.969172569 1 13.35566416 -6.344341041 2.377391092 0.961367315 0.850340859 0.804163129 0.026282335 0.129814254 1.438236817 0.008620264 0.010375931 4.53E-07 6.344341041 -0.111026456 LAAAEETAVS(ph)PR ddPTM_A459_MK2206_30min_R2 7 LAAAEETAVSPR 12 0 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 1 LAAAEETAVS(1)PR;LAAAEETAVS(1)PR;LAAAEETAVS(1)PR;LAAAEET(0.008)AVS(0.992)PR;LAAAEETAVS(1)PR;LAAAEETAVS(1)PR;LAAAEETAVS(1)PR 182.72 0.00010424 679318000 233922.8 273630 250103 327743.5 293827.4 400097.9 279178.2 237922 301656.6 250906 TRUE FALSE 251832.1094 260041.9321 258441.3092 300965.8077 282290.2599 415323.9059 242521.767 269019.2223 327894.1458 242718.9578 1.037546106 1.071370504 1.064775951 1.239976516 1.163033421 1.711130889 0.999187576 1.108356862 1.350921036 1 17.88892727 -5.755282996 7.482721893 1.237677741 1.058551884 0.132918115 0.193205717 0.258627275 88.35652648 0.053670736 0.087642502 1.76E-06 5.755282996 -0.179125858 LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK ddPTM_A459_MK2206_30min_R2 1 LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK 37 2 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 0 81.803 4.63E-07 18867000 49907 65127 58187 54314 56899 36816 68304 46870 47658 62709 FALSE TRUE 53727.91829 61892.88788 60126.92554 49876.37246 54664.85937 38217.05868 59335.60275 52996.06993 51803.20669 60662.81047 0.885681324 1.02027729 0.99116617 0.822190269 0.901126389 0.629991561 0.978121559 0.873617123 0.853953292 1 15.88852472 -5.757022643 24.98397089 0.856660714 0.971165185 0.169158468 0.100128713 171.5477872 970371.1284 0.026822719 0.044476248 1.75E-06 5.757022643 0.11450447 LAAGHELQPLAIVDQRPS(ph)SR ddPTM_A459_MK2206_30min_R2 1 LAAGHELQPLAIVDQRPSSR 20 1 P17302 P17302 GJA1 Gap junction alpha-1 protein 1 LAAGHELQPLAIVDQRPS(0.5)S(0.5)R 106.93 0.00025311 2970100 13761 12792 11153 11619 10389 12796 17377 11948 13124 15061 TRUE FALSE 14814.55274 12156.76788 11524.83545 10669.69053 9981.075659 13282.96075 15095.37903 13509.64462 14265.5018 14569.5608 1.016815328 0.834394945 0.791021473 0.732327534 0.685063592 0.911692598 1.03609019 0.927251329 0.97913053 1 13.83066977 -6.992126765 24.74922381 0.978746458 0.806668409 0.483075553 0.084782973 151.2755864 475526.1127 0.031729733 0.027932349 1.02E-07 6.992126765 -0.172078048 LAAGHELQPLAIVDQRPSS(ph)R ddPTM_A459_MK2206_30min_R2 1 LAAGHELQPLAIVDQRPSSR 20 1 P17302 P17302 GJA1 Gap junction alpha-1 protein 1 LAAGHELQPLAIVDQRPS(0.095)S(0.905)R 104.49 0.0027776 0 15002 14878 11885 15582 15417 13117 18800 13889 11932 16366 TRUE FALSE 16150.56465 14139.18015 12281.23997 14308.90076 14811.65112 13616.17663 16331.53742 15704.33999 12969.82379 15831.97876 1.020122936 0.893077256 0.775723626 0.903797369 0.93555274 0.860042628 1.031553773 0.991937914 0.819216851 1 13.95055396 -7.238639555 24.55471273 0.960005318 0.89423185 0.133672388 0.077731436 1322.21674 1423988.34 0.030323867 0.023470391 5.77E-08 7.238639555 -0.065773468 LAAGRPFNT(ph)YPR ddPTM_A459_MK2206_30min_R2 2 LAAGRPFNTYPR 12 1 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 LAAGRPFNT(1)YPR;LAAGRPFNT(0.999)Y(0.001)PR 99.834 0.019384 128067000 53607 63106 54585 58549 61299 62520 53358 42467 59159 49038 TRUE FALSE 57711.19314 59972.2478 56404.83666 53765.35941 58892.09326 64899.24241 46352.03051 48017.58271 64304.54289 47437.89408 1.216563135 1.264226606 1.189024887 1.133384195 1.241456738 1.368088607 0.977109786 1.012219949 1.355552225 1 15.53375234 -14.52287873 0.111317644 0.399310727 1.29453285 0.182259666 0.122060165 290.6020644 2.135822732 39.84247167 1.518486838 3.00E-15 14.52287873 0.895222124 LAALALASSENSS(ph)STPEECEEMSEKPK ddPTM_A459_MK2206_30min_R1 1 LAALALASSENSSSTPEECEEMSEKPK 27 1 O00567 O00567 NOP56 Nucleolar protein 56 1 LAALALAS(0.001)S(0.003)ENS(0.044)S(0.317)S(0.317)T(0.317)PEECEEMSEKPK 114.92 4.70E-12 12900000 2957.6 3572.1 3665 3143.8 2917.3 2797.3 2838.9 3401.5 2698 3117.3 TRUE FALSE 2706.040589 3339.555641 3416.230011 3385.936021 2801.097764 2955.680709 2649.522161 3371.761044 2978.466755 3503.494658 0.77238325 0.953207002 0.975092114 0.966445321 0.799515352 0.843637852 0.756251235 0.962399368 0.850141657 1 11.77457898 -1.544091051 23.09796415 0.885937991 0.000209471 0 0.088354048 0 0 0.020371639 0 0.028569915 1.544091051 -0.88572852 LAALALASSENSSST(ph)PEECEEMSEKPK ddPTM_A459_MK2206_30min_R1 1 LAALALASSENSSSTPEECEEMSEKPK 27 1 O00567 O00567 NOP56 Nucleolar protein 56 1 LAALALAS(0.016)S(0.074)ENS(0.012)S(0.046)S(0.18)T(0.672)PEECEEMSEKPK 107.75 2.45E-09 18446000 2426 3053.3 2790.7 2573 2254.5 2113.3 2157.5 2855.5 2354.5 2196.5 TRUE FALSE 2219.655961 2854.529615 2601.275059 2771.172906 2164.698491 2232.95322 2013.577112 2830.534665 2599.258701 2468.619003 0.899148859 1.156326518 1.05373695 1.122559983 0.876886425 0.904535377 0.815669453 1.146606528 1.052920154 1 11.26948848 -3.388475007 9.182650666 1.004482196 0.672295455 0 0.116192149 0 0 0.027895266 0 0.000408813 3.388475007 -0.332186741 LAAPSVSHVS(ph)PR ddPTM_A459_MK2206_30min_R1 5 LAAPSVSHVSPR 12 0 A0A0U1RRM7;A0A0U1RQW3;A0A0U1RQJ8;Q8WXE1-5;Q8WXE1-3;Q8WXE1-2;Q8WXE1 A0A0U1RRM7 ATRIP ATR-interacting protein 1 LAAPSVSHVS(1)PR;LAAPSVS(0.001)HVS(0.999)PR;LAAPSVS(0.004)HVS(0.996)PR;LAAPSVS(0.002)HVS(0.998)PR;LAAPSVSHVS(1)PR 145.46 0.00045154 54325200 16483.4 11173.27 13138.7 9727 19085 18273.3 17282.3 15247.4 10302.66 10058.7 TRUE FALSE 15081.40027 10445.88809 12246.88165 10476.17523 18324.80404 19307.91845 16129.4293 15114.09359 11373.65838 11304.8477 1.334064879 0.924018472 1.083330088 0.9266976 1.620968679 1.707932648 1.42677104 1.336956852 1.006086829 1 13.46465394 -6.250419013 24.96614943 1.388390439 1.057977261 0.24284539 0.238614343 941.1859471 2132213.757 0.072791332 0.093054034 5.62E-07 6.250419013 -0.330413177 LAAPSVSHVS(ph)PR ddPTM_A459_MK2206_30min_R2 5 LAAPSVSHVSPR 12 0 A0A0U1RRM7;A0A0U1RQW3;A0A0U1RQJ8;Q8WXE1-5;Q8WXE1-3;Q8WXE1-2;Q8WXE1 A0A0U1RRM7 ATRIP ATR-interacting protein 1 LAAPSVS(0.003)HVS(0.997)PR;LAAPS(0.001)VS(0.003)HVS(0.996)PR;LAAPSVS(0.001)HVS(0.999)PR;LAAPSVSHVS(1)PR;LAAPSVS(0.05)HVS(0.95)PR 145.86 0.0004445 91658900 132694 228110 161602 252087 266297 298371 270431 178388 234231 191069 TRUE FALSE 142853.1547 216782.3891 166989.73 231490.6857 255840.8417 309725.7175 234923.0849 201703.9241 254603.989 184834.4342 0.772870896 1.172846337 0.903455737 1.252421859 1.384162225 1.675692729 1.270991988 1.091268112 1.377470546 1 17.49587403 -5.856260966 4.934753795 1.321176576 0.972835974 0.392645324 0.194277388 0.216317854 8.755247416 0.056252583 0.085887238 1.39E-06 5.856260966 -0.348340602 LAAQES(ph)SEAEDMSVPR ddPTM_A459_MK2206_30min_R1 1 LAAQESSEAEDMSVPR 16 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0 A0A0A0MR88 FAM21C;FAM21D WASH complex subunit FAM21C;Putative WASH complex subunit FAM21 1 LAAQES(0.698)S(0.302)EAEDMSVPR 172.32 6.48E-06 6971000 2260.4 2296.6 2348.3 1710.5 2407.6 2131 2358.2 2134.4 2239.4 2258 TRUE FALSE 2068.14111 2147.090923 2188.903939 1842.243006 2311.700194 2251.655378 2200.888781 2115.739166 2472.193644 2537.738087 0.814954514 0.846064822 0.862541312 0.725938983 0.910929385 0.887268623 0.867263959 0.833710609 0.974172101 1 11.30932746 -8.42661444 0.488671107 1.009048326 0.824602502 0.538504508 0.050568041 0.840497558 0.510146278 0.060148167 0.030709319 3.74E-09 8.42661444 -0.184445823 LAAQES(ph)SETEDMSVPR ddPTM_A459_MK2206_30min_R1 1 LAAQESSETEDMSVPR 16 0 F8W7U3;Q641Q2-2;Q641Q2;E7ESD2;A0A087WYF6 F8W7U3 FAM21A WASH complex subunit FAM21A 1 LAAQES(0.5)S(0.5)ETEDMSVPR 289.87 1.35E-74 8359500 1847.9 1675.8 1944.3 1542.3 2394.9 2066.7 2057.4 1899.9 1688.6 1990 TRUE FALSE 1690.726401 1566.705115 1812.326333 1661.088213 2299.506062 2183.714768 1920.1546 1883.289375 1864.136013 2236.536224 0.755957531 0.700505138 0.810327288 0.742705705 1.028155072 0.976382473 0.858539459 0.842056281 0.83349243 1 11.12705041 -6.235059756 24.90738817 0.91464277 0.752808501 0.606335473 0.067186673 567.8577418 536165.8311 0.021392149 0.027607939 5.82E-07 6.235059756 -0.161834269 LAAQES(ph)SETEDMSVPR ddPTM_A459_MK2206_30min_R2 2 LAAQESSETEDMSVPR 16 0 F8W7U3;Q641Q2-2;Q641Q2;E7ESD2;A0A087WYF6 F8W7U3 FAM21A WASH complex subunit FAM21A 1 LAAQES(0.567)S(0.274)ET(0.158)EDMSVPR;LAAQES(0.597)S(0.254)ET(0.149)EDMSVPR 227 4.46E-15 16014200 28201 26924 26742 31582 27459 26118 32271 23219.3 23881 27620 TRUE FALSE 30360.09024 25586.99331 27633.56493 29001.64957 26380.82169 27111.93879 28033.77894 26254.14223 25958.12621 26718.76166 1.136283583 0.957641437 1.034238236 1.085441382 0.98735196 1.014715395 1.049216999 0.982610742 0.971531785 1 14.70556552 -4.744816272 24.92481115 1.012556832 1.136283956 0.516373415 0.036768678 842.6134762 1263351.121 0.009355289 0.254321092 1.80E-05 4.744816272 0.123727124 LAAQESS(ph)EAEDMSVPR ddPTM_A459_MK2206_30min_R1 1 LAAQESSEAEDMSVPR 16 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0 A0A0A0MR88 FAM21C;FAM21D WASH complex subunit FAM21C;Putative WASH complex subunit FAM21 1 LAAQES(0.079)S(0.916)EAEDMS(0.006)VPR 221.34 6.87E-11 5759600 1938.2 2067.8 2079.7 1750.8 1886.8 2062.5 2291.1 1746.8 1797.4 1983.1 TRUE FALSE 1773.345912 1933.185844 1938.535758 1885.646919 1811.644761 2179.276968 2138.264899 1731.527912 1984.246162 2228.7814 0.795657175 0.867373464 0.869773841 0.846043905 0.812840937 0.977788566 0.959387448 0.776894455 0.890282987 1 11.12203941 -6.738276268 24.99997465 0.909333937 0.842125509 0.301473775 0.061440243 384.7239529 415232.0943 0.021118342 0.021105599 1.83E-07 6.738276268 -0.067208429 LAAQESS(ph)EAEDMSVPR ddPTM_A459_MK2206_30min_R2 2 LAAQESSEAEDMSVPR 16 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0 A0A0A0MR88 FAM21C;FAM21D WASH complex subunit FAM21C;Putative WASH complex subunit FAM21 1 LAAQES(0.024)S(0.976)EAEDMSVPR;LAAQES(0.015)S(0.984)EAEDMSVPR 310.98 5.10E-102 10166500 37890 43615 33777 46844 43074 39046 42049 32423 33125 39131 TRUE FALSE 40790.88753 41449.14252 34903.10832 43016.69535 41382.69833 40531.92289 36527.91579 36660.79742 36006.15262 37854.15867 1.077580085 1.094969324 0.922041581 1.136379644 1.093214056 1.070738971 0.964964407 0.968474765 0.951180898 1 15.20816418 -7.262203365 24.88208012 0.96852791 1.065062529 0.427841964 0.053592044 65.60999632 2136798.809 0.021905451 0.015757122 5.47E-08 7.262203365 0.096534619 LAAQESS(ph)ETEDMSVPR ddPTM_A459_MK2206_30min_R1 1 LAAQESSETEDMSVPR 16 0 F8W7U3;Q641Q2-2;Q641Q2;E7ESD2;A0A087WYF6 F8W7U3 FAM21A WASH complex subunit FAM21A 1 LAAQES(0.205)S(0.794)ET(0.001)EDMSVPR 300.18 5.17E-88 8918300 2193.9 1724.7 1662.6 1140.6 1866.3 1707.3 1847.8 1610.3 1751.5 1511.5 TRUE FALSE 2007.297284 1612.421717 1549.747344 1228.44921 1791.961319 1803.965851 1724.536634 1596.221317 1933.574693 1698.756031 1.18162776 0.94917792 0.912283645 0.723146342 1.054866788 1.061933449 1.015176165 0.939641295 1.138229774 1 10.73026296 LAAQLGAPTS(ph)PIPDSAIVNTR ddPTM_A459_MK2206_30min_R2 2 LAAQLGAPTSPIPDSAIVNTR 21 0 Q9H8Y5;B8ZZS4 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 LAAQLGAPT(0.012)S(0.988)PIPDSAIVNTR;LAAQLGAPT(0.044)S(0.956)PIPDSAIVNTR 214.42 2.20E-18 16076200 78995 92898 78540 94406 75103 80794 76330 64286 68275 67975 TRUE FALSE 85042.91794 88284.82041 81158.4844 86692.72781 72154.07886 83868.67229 66307.77931 72688.40093 74213.43609 65756.98132 1.293291088 1.342592355 1.234218524 1.31838059 1.09728393 1.275433735 1.008376266 1.105409638 1.128601627 1 16.00485645 -6.591065186 0.425301332 1.022967119 1.363672915 0.654443773 0.071361116 0.86003899 0.310913877 0.066771727 0.122398131 2.56E-07 6.591065186 0.340705796 LADAMAES(ph)PSRDVVGSGTDTALDVAVK ddPTM_A459_MK2206_30min_R1 1 LADAMAESPSRDVVGSGTDTALDVAVK 27 1 Q9H6U6-8;Q9H6U6-3;Q9H6U6-7 Q9H6U6-8 BCAS3 Breast carcinoma-amplified sequence 3 1 LADAMAES(0.81)PS(0.188)RDVVGSGTDTALDVAVK 79.236 0.0051517 0 419.62 349.16 322.92 370.57 541.8 475.56 440.84 749.65 414 463.55 TRUE FALSE 383.9291155 326.4296205 301.0010901 399.1113656 520.2189587 502.4857962 411.432368 743.0958891 457.0367815 520.9780736 0.736939105 0.626570747 0.577761532 0.766080927 0.998542904 0.964504692 0.789730679 1.426347723 0.877266827 1 9.025078845 -6.161881169 2.611789448 1.022525816 0.644786156 0.51631573 0.160281113 0.227706404 3.031610507 0.050934322 0.068853076 6.89E-07 6.161881169 -0.37773966 LADAMAES(ph)PSRDVVGSGTELQR ddPTM_A459_MK2206_30min_R1 2 LADAMAESPSRDVVGSGTELQR 22 1 K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6 K7ESE9 BCAS3 Breast carcinoma-amplified sequence 3 1 LADAMAES(0.479)PS(0.479)RDVVGS(0.018)GT(0.024)ELQR;LADAMAES(0.797)PS(0.203)RDVVGSGTELQR 65.149 0.0038986 17657900 1663.81 1465.7 1672.35 1259.26 1948.73 1735.37 1998.23 1635.5 1997.29 1490.22 TRUE FALSE 1522.294222 1370.282664 1558.835541 1356.248423 1871.107958 1833.62515 1864.931723 1621.200996 2204.915443 1674.839704 0.908919354 0.818157499 0.930737155 0.809778046 1.117186291 1.094806354 1.113498634 0.967973826 1.316493416 1 10.70980731 -6.267700055 24.93888085 1.100307728 0.867976485 0.605180696 0.092888925 319.2768438 1271810.752 0.026728868 0.031055114 5.40E-07 6.267700055 -0.232331243 LADAMAES(ph)PSRDVVGSGTELQR ddPTM_A459_MK2206_30min_R2 1 LADAMAESPSRDVVGSGTELQR 22 1 K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6 K7ESE9 BCAS3 Breast carcinoma-amplified sequence 3 1 LADAMAES(0.923)PS(0.074)RDVVGS(0.002)GT(0.002)ELQR 55.707 0.013682 4193000 5529.7 6407.6 5985.9 9099 7049.6 9399.8 11411 7207.4 5492.3 9517.2 TRUE FALSE 5953.058084 6089.407902 6185.466918 8355.582594 6772.797283 9757.515976 9912.721993 8149.431927 5970.010326 9206.654543 0.646603829 0.661413749 0.6718474 0.907559044 0.735641514 1.059832964 1.07669099 0.885167559 0.648445133 1 13.1684613 -5.807704025 1.406671752 0.919354618 0.636846209 0.421680309 0.127380372 0.442730888 1.767962246 0.045364244 0.101741977 1.56E-06 5.807704025 -0.282508409 LADFGVLHR ddPTM_A459_MK2206_30min_R1 2 LADFGVLHR 9 0 P26639;P26639-2 P26639 TARS "Threonine--tRNA ligase, cytoplasmic" 0 ; 168.25 0.0011007 13535400 15241.2 15508.8 15809.4 14035.7 16604.5 14853.5 16741.1 15737.7 14228.2 12784 FALSE TRUE 13944.85591 14499.1743 14736.30198 15116.73205 15943.1076 15694.49233 15624.33176 15600.10695 15707.27231 14367.77843 0.970564515 1.009145176 1.025649306 1.052127308 1.109643198 1.092339529 1.087456341 1.085770289 1.093229018 1 13.81054939 -5.54306919 1.392687876 1.083312686 0.980256322 0.587552191 0.029367532 0.306101766 1.105540103 0.008924974 0.029616804 2.86E-06 5.54306919 -0.103056365 LADFGVLHR ddPTM_A459_MK2206_30min_R2 2 LADFGVLHR 9 0 P26639;P26639-2 P26639 TARS "Threonine--tRNA ligase, cytoplasmic" 0 ; 134.77 0.0039397 5568500 84872 100336 84555 99148 97272 97945 101793 84552 90265 93477 FALSE TRUE 91369.86558 95353.46014 87374.0215 91047.29124 93452.61253 101672.3656 88427.45682 95603.23671 98116.08654 90426.85315 1.010428456 1.054481681 0.966239767 1.006861215 1.03346085 1.124360321 0.977889352 1.057243876 1.085032633 1 16.46446364 -6.519000537 24.99979739 1.051474047 1.010942299 0.15611719 0.04295006 308.2269616 1986922.682 0.013852983 0.014134502 3.03E-07 6.519000537 -0.040531748 LADS(ph)GDGAGPSPEEKDFLK ddPTM_A459_MK2206_30min_R1 1 LADSGDGAGPSPEEKDFLK 19 1 Q92917 Q92917 GPKOW G patch domain and KOW motifs-containing protein 1 LADS(0.748)GDGAGPS(0.252)PEEKDFLK 53.553 0.035781 18993000 2440.2 2825 2767.1 2315.3 2050.8 1628.4 2161.6 2253.3 2366.1 1829.8 TRUE FALSE 2232.648176 2641.091987 2579.276962 2493.624807 1969.112293 1720.598601 2017.403608 2233.599636 2612.064562 2056.489438 1.085659928 1.284272089 1.254213571 1.212563877 0.957511503 0.836667852 0.980993907 1.08612259 1.270157052 1 11.00596795 -6.249482982 23.16856544 1.014907157 1.2177582 0.391525119 0.113969304 305.4121252 591811.6165 0.036601739 0.046798429 5.63E-07 6.249482982 0.202851043 LADS(ph)GDGAGPSPEEKDFLK ddPTM_A459_MK2206_30min_R2 1 LADSGDGAGPSPEEKDFLK 19 1 Q92917 Q92917 GPKOW G patch domain and KOW motifs-containing protein 1 LADS(0.558)GDGAGPS(0.442)PEEKDFLK 54.288 0.03381 11550000 30613 35575 34711 33587 32852 24597 39014 32117 26922 32542 TRUE FALSE 32956.75482 33808.39723 35868.24742 30842.83466 31562.06541 25533.05607 33891.41494 36314.80217 29263.6269 31480.15721 1.046905662 1.073958971 1.139392258 0.979754785 1.0026019 0.811084135 1.076596115 1.153577536 0.929589605 1 14.94215512 -5.777057792 24.9790855 0.995977984 1.085472972 0.196427617 0.086475783 417.2888802 667384.227 0.025811688 0.03844057 1.67E-06 5.777057792 0.089494988 LADSGDGAGPS(ph)PEEKDFLK ddPTM_A459_MK2206_30min_R1 2 LADSGDGAGPSPEEKDFLK 19 1 Q92917 Q92917 GPKOW G patch domain and KOW motifs-containing protein 1 LADS(0.008)GDGAGPS(0.992)PEEKDFLK;LADS(0.003)GDGAGPS(0.997)PEEKDFLK 93.73 0.001081 26263000 8463.3 9908.1 9550.2 8923.2 7452.9 6306.2 7473.9 8297 8093.8 7677.1 TRUE FALSE 7743.451892 9263.080889 8901.959032 9610.46641 7156.035211 6663.251594 6975.329768 8224.460204 8935.179474 8628.197107 0.897458855 1.073582438 1.031728752 1.113844096 0.829377809 0.772264647 0.808434216 0.953207269 1.03557897 1 13.07484342 -6.267253773 24.97899471 0.886524743 1.032510973 0.306134714 0.094075113 565.1674045 2427990.054 0.030691446 0.035693505 5.40E-07 6.267253773 0.14598623 LADVAPT(ph)PPKTPAR ddPTM_A459_MK2206_30min_R1 2 LADVAPTPPKTPAR 14 1 Q9UMN6;Q9UMN6-2 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 LADVAPT(0.999)PPKT(0.001)PAR;LADVAPT(0.999)PPKT(0.001)PAR 97.214 0.015577 12303300 9293.1 9461.9 9551.8 8285 8748.8 8086.3 8413.5 7472.7 7106.8 6693.1 TRUE FALSE 8502.673045 8845.92859 8903.450429 8923.112136 8400.31677 8544.139318 7852.250766 7407.366972 7845.577292 7522.291758 1.130330133 1.175961911 1.183608761 1.186222553 1.116723073 1.135842585 1.04386416 0.984722105 1.042977 1 12.87695655 -7.217219871 1.588717997 1.006366925 1.165341065 0.882190741 0.024839077 0.12232403 0.60491599 0.013775008 0.008624162 6.06E-08 7.217219871 0.15897414 LAEAPSPAPTPSPTPVEDLGPQTSTSPGRLS(ph)PDFAEELR ddPTM_A459_MK2206_30min_R1 1 LAEAPSPAPTPSPTPVEDLGPQTSTSPGRLSPDFAEELR 39 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 LAEAPSPAPTPS(0.007)PT(0.035)PVEDLGPQT(0.178)S(0.178)T(0.178)S(0.178)PGRLS(0.245)PDFAEELR 61.228 3.33E-05 6953000 833.3 970.63 1040.3 1150.9 1338.9 1245.2 1163.5 1229.5 1165.2 1105.6 TRUE FALSE 762.4234592 907.4418106 969.6873344 1239.542517 1285.568778 1315.702148 1085.885038 1218.750611 1286.32671 1242.570075 0.613585885 0.730294274 0.78038845 0.997563471 1.03460465 1.058855492 0.873902454 0.980830487 1.035214621 1 10.2791115 -5.557018482 2.056645841 0.997779124 0.661446642 0.860063365 0.054518667 0.120219173 1.005792753 0.016881774 0.041340439 2.77E-06 5.557018482 -0.336332482 LAEDEGDS(ph)EPEAVGQSR ddPTM_A459_MK2206_30min_R1 2 LAEDEGDSEPEAVGQSR 17 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 LAEDEGDS(1)EPEAVGQSR;LAEDEGDS(1)EPEAVGQSR 227.41 3.17E-16 157548000 4527 4668.1 4883.7 4268.5 4318.9 4031.6 3875.3 3833 3524.7 2472.4 TRUE FALSE 4141.954878 4364.205842 4552.208051 4597.26061 4146.869068 4259.865708 3616.785808 3799.488485 3891.105178 2778.699578 1.4906091 1.570592905 1.638251248 1.654464789 1.492377622 1.533042918 1.301610954 1.367362098 1.400333166 1 11.44019415 -8.718639985 0.357870183 0.949199981 1.617139064 0.83430007 0.074580206 0.776043813 0.244221199 0.171882975 0.07824895 1.91E-09 8.718639985 0.667939083 LAEDEGDS(ph)EPEAVGQSR ddPTM_A459_MK2206_30min_R2 3 LAEDEGDSEPEAVGQSR 17 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 LAEDEGDS(1)EPEAVGQSR;LAEDEGDS(1)EPEAVGQSR;LAEDEGDS(1)EPEAVGQSR 248.7 1.93E-30 586210600 111134 142634 121149 155142 131586 134508 175206 128285 107943 128434 TRUE FALSE 119642.5045 135551.003 125188.0472 142466.4023 126419.2725 139626.7962 152201.2417 145052.29 117331.687 124243.2091 0.962970172 1.091013376 1.007604746 1.146673556 1.017514546 1.123818333 1.225026646 1.167486666 0.944371027 1 16.92280747 -3.374064699 0.788258804 1.098492316 1.05E-15 0.121972755 0.084603763 38.8083653 3.189524303 0.030924163 61.33854239 0.000422606 3.374064699 -1.098492316 LAEETEGPS(ph)DGESAAEKR ddPTM_A459_MK2206_30min_R1 1 LAEETEGPSDGESAAEKR 18 1 Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766 RREB1 Ras-responsive element-binding protein 1 1 LAEET(0.001)EGPS(0.997)DGES(0.002)AAEKR 74.324 0.04814 0 995.46 879.02 1123.3 902.41 1055.6 798.51 985.35 1011.3 865.09 673.65 TRUE FALSE 910.7908996 821.7956382 1047.053526 971.9137746 1013.553217 843.7209461 919.6190994 1002.458311 955.0192013 757.1068478 1.20298859 1.085442089 1.382966656 1.283720755 1.338718861 1.11440142 1.214649031 1.324064514 1.261406107 1 9.564353107 -6.755092467 24.99994604 1.205142299 1.25742444 0.088048822 0.111048681 579.02056 2280709.863 0.038146351 0.037262482 1.76E-07 6.755092467 0.052282141 LAEETEGPS(ph)DGESAAEKR ddPTM_A459_MK2206_30min_R2 1 LAEETEGPSDGESAAEKR 18 1 Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766 RREB1 Ras-responsive element-binding protein 1 1 LAEETEGPS(1)DGESAAEKR 86.258 0.0037604 8957900 22561 29871 20936 29232 24644 20658 37333 24851 19237 25046 TRUE FALSE 24288.28751 28387.64958 21633.99579 26843.65209 23676.35273 21444.15467 32431.13226 28099.11103 20910.19949 24228.75107 1.002457264 1.171651378 0.892905942 1.107925539 0.977200709 0.885070576 1.338539166 1.159742446 0.863032495 1 14.56443242 LAELEEFINGPNNAHIQQVGDR ddPTM_A459_MK2206_30min_R1 1 LAELEEFINGPNNAHIQQVGDR 22 0 A0A087WVQ6;Q00610-2;Q00610;J3KS13 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 205.55 5.30E-23 10264000 2041.7 2195.3 2150.3 1693 2240.1 1951.2 1878.7 1920.1 1590.2 1615.9 FALSE TRUE 1868.042694 2052.385571 2004.343627 1823.395153 2150.872074 2061.675258 1753.375351 1903.312768 1755.506981 1816.089891 1.028606955 1.130112326 1.10365882 1.004022522 1.184342297 1.135227539 0.965467271 1.048027841 0.966641018 1 10.8266199 -7.262330403 24.99909257 0.999036351 1.099093062 0.472453044 0.053047443 76.53866985 2147354.812 0.021388901 0.01536433 5.47E-08 7.262330403 0.100056711 LAELSDYRR ddPTM_A459_MK2206_30min_R2 2 LAELSDYRR 9 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 0 ; 113.66 0.01216 4086200 14332.6 27676 18799.9 25727 25872 25694 21861.4 16537.6 23636 17931.9 FALSE TRUE 15429.91488 26301.65008 19426.67928 23625.0218 24856.13528 26671.80317 18990.97192 18699.1211 25691.81656 17346.78357 0.889497169 1.516226335 1.119900943 1.361925207 1.432895913 1.537564763 1.09478347 1.077958979 1.481070911 1 14.08238056 -11.07682251 4.644354451 0.997586728 1.284609608 0.135325544 0.211229122 0.005151313 0.000494745 0.199604454 0.04803632 8.38E-12 11.07682251 0.28702288 LAERLS(ph)PFLAESK ddPTM_A459_MK2206_30min_R2 1 LAERLSPFLAESK 13 1 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 LAERLS(1)PFLAESK 71.402 0.031883 5920200 25686 28306 26809 27603 32731 24959 31203 24340 27048 31442 TRUE FALSE 27652.53991 26900.3652 27702.79868 25347.7466 31445.81648 25908.83223 27106.00862 27521.32157 29400.58615 30416.05011 0.909143028 0.884413495 0.910795405 0.833367466 1.033856019 0.851814491 0.891174512 0.904828913 0.966614207 1 14.89254519 -8.393436428 2.813999798 0.998961227 0.90171806 0.303756711 0.050204304 0.304519044 4.611316873 0.045951277 0.012491 4.04E-09 8.393436428 -0.097243167 LAES(ph)PQLSK ddPTM_A459_MK2206_30min_R1 1 LAESPQLSK 9 0 Q96A19 Q96A19 CCDC102A Coiled-coil domain-containing protein 102A 1 LAES(0.953)PQLS(0.047)K 80.245 0.046898 6699900 3869.9 3071.3 3416.7 3121.1 3482.6 3296.1 3615.6 3286.8 3034.5 3174.9 TRUE FALSE 3540.744683 2871.357812 3184.783923 3361.487663 3343.880667 3482.722334 3374.409921 3258.063854 3349.947134 3568.230581 0.992297051 0.804700746 0.892538711 0.942060101 0.937125724 0.976036233 0.945681576 0.913075481 0.938825857 1 11.80099313 -5.762630304 5.010858149 0.947453674 0.886592613 0.202479291 0.047784489 0.249139383 17.24073783 0.012823396 0.021003664 1.73E-06 5.762630304 -0.06086106 LAFPS(ph)PFGHLSEGFSHSR ddPTM_A459_MK2206_30min_R1 1 LAFPSPFGHLSEGFSHSR 18 0 Q13501;Q13501-2;E7EMC7;E9PFW8;C9JRJ8 Q13501 SQSTM1 Sequestosome-1 1 LAFPS(1)PFGHLSEGFSHSR 83.082 0.0059919 4324800 1884.7 1241.1 1565 1263.8 3113.2 3146.8 2291.5 2191.7 1179.2 1124.2 TRUE FALSE 1724.396368 1160.304164 1458.77216 1361.138095 2989.194652 3324.969097 2138.638216 2172.538198 1301.78206 1263.474383 1.364805168 0.918344036 1.154572012 1.077297738 2.365852993 2.631607843 1.692664485 1.719495248 1.030319314 1 10.3031807 -6.228402442 24.13824582 1.818179408 1.115569225 0.265167384 0.487980357 542.5142446 396384.2632 0.150687547 0.194519508 5.91E-07 6.228402442 -0.702610184 LAGEDKDSEPAADGPAASEDPSATESDLPNPHVGEVS(ph)VLSSGSPR ddPTM_A459_MK2206_30min_R2 1 LAGEDKDSEPAADGPAASEDPSATESDLPNPHVGEVSVLSSGSPR 45 1 O14686;O14686-3;F8VWW4 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 LAGEDKDSEPAADGPAASEDPSATESDLPNPHVGEVS(0.657)VLS(0.114)S(0.114)GS(0.114)PR 108.28 1.38E-26 21805000 75407 96496 86740 112200 99415 84636 123090 97719 92534 95796 TRUE FALSE 81180.2179 91704.14896 89631.86831 103032.9011 95511.46758 87856.88229 106928.1351 110491.2088 100582.4401 92670.18437 0.876012263 0.989575553 0.967213661 1.111823633 1.030660166 0.948059863 1.153856938 1.192305913 1.085380813 1 16.49981762 -3.046164679 0.426217146 1.098462371 1.90E-11 0.427531672 0.070996148 21.30320204 0.927223337 0.051338786 16.22909397 0.000899157 3.046164679 -1.098462371 LAGEDKDSEPAADGPAASEDPSATESDLPNPHVGEVSVLSSGS(ph)PR ddPTM_A459_MK2206_30min_R1 1 LAGEDKDSEPAADGPAASEDPSATESDLPNPHVGEVSVLSSGSPR 45 1 O14686;O14686-3;F8VWW4 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 LAGEDKDSEPAADGPAASEDPSATESDLPNPHVGEVS(0.117)VLS(0.239)S(0.156)GS(0.488)PR 98.131 1.92E-20 15636000 1926.6 1989 1919.2 1390.5 1700 1885.5 1734.8 1847.9 1788.4 1667.3 TRUE FALSE 1762.732553 1859.515738 1788.930051 1497.596551 1632.2854 1992.255381 1619.074657 1831.744005 1974.31058 1873.857711 0.94069712 0.992346285 0.954677637 0.799205053 0.871082895 1.063183916 0.86403287 0.977525665 1.053607522 1 10.87179569 -7.998453406 24.86334004 1.023058054 0.927776125 0.251664624 0.06976246 64.94269327 1044041.065 0.040172161 0.019066348 1.00E-08 7.998453406 -0.09528193 LAGEDKDSEPAADGPAASEDPSATESDLPNPHVGEVSVLSSGS(ph)PR ddPTM_A459_MK2206_30min_R2 1 LAGEDKDSEPAADGPAASEDPSATESDLPNPHVGEVSVLSSGSPR 45 1 O14686;O14686-3;F8VWW4 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 LAGEDKDSEPAADGPAASEDPSATESDLPNPHVGEVS(0.245)VLS(0.193)S(0.201)GS(0.361)PR 87.087 6.45E-16 17615000 43196 58389 47234 71184 69885 64308 65430 50132 57227 65629 TRUE FALSE 46503.11897 55489.48717 48808.75799 65368.03949 67140.96376 66755.286 56838.9624 56684.42453 62204.50102 63487.5311 0.732476412 0.874021815 0.768792819 1.029620122 1.057545672 1.051470814 0.895277567 0.892843422 0.979790833 1 15.95418566 -5.758717088 24.99975254 0.984032622 0.799989464 0.66804404 0.062855581 48.43453643 444780.4921 0.019057452 0.031193391 1.74E-06 5.758717088 -0.184043158 LAGESESNLR ddPTM_A459_MK2206_30min_R2 2 LAGESESNLR 10 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 168.26 0.0037539 11750500 31763 48902 33665 50933 47445 40301 42098 27050 41982 43430 FALSE TRUE 34194.7997 46473.59779 34787.3743 46771.61097 45582.07091 41834.6828 36570.48203 30585.52788 45633.51847 42012.88266 0.813912246 1.106174936 0.828016839 1.113268312 1.084954615 0.995758447 0.870458767 0.728003554 1.086179181 1 15.35854416 -7.248806945 21.66456751 0.898494016 0.998121445 0.050449083 0.130663962 285.7447682 490051.39 0.048610864 0.037281533 5.64E-08 7.248806945 0.099627429 LAGS(ph)PIR ddPTM_A459_MK2206_30min_R2 1 LAGSPIR 7 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;F8W8U2 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 LAGS(1)PIR 79.713 0.046245 48070000 247760 181790 227380 223170 186020 219630 253710 218430 163520 253970 TRUE FALSE 266728.6961 172762.5729 234960.7357 204936.2971 178715.9201 227988.1736 220397.5722 246979.551 177742.674 245682.9797 1.085662085 0.703193087 0.9563574 0.834149347 0.727424913 0.927977078 0.897081159 1.005277416 0.723463523 1 17.90643839 LAGS(ph)PPGSGQWKPK ddPTM_A459_MK2206_30min_R1 1 LAGSPPGSGQWKPK 14 1 H3BLU1;Q4KMQ1 H3BLU1 TPRN Taperin 1 LAGS(1)PPGSGQWKPK 150.22 0.0020186 6794500 2611.9 3028.7 2726.4 2595.7 2805.4 2486.5 2505.3 2387.6 2068.1 2238.1 TRUE FALSE 2389.744189 2831.53108 2541.339564 2795.621264 2693.654977 2627.283481 2338.176008 2366.725465 2283.086396 2515.372725 0.950055698 1.12569046 1.010323257 1.111414319 1.070877072 1.044490725 0.929554489 0.94090448 0.907653316 1 11.29655648 -7.219712835 5.202256694 0.939354204 1.058002166 0.510692935 0.05138888 0.146496415 10.02280004 0.019061752 0.014321434 6.03E-08 7.219712835 0.118647962 LAHACS(ph)ELK ddPTM_A459_MK2206_30min_R1 1 LAHACSELK 9 0 Q8IYW2 Q8IYW2 CFAP46 Cilia- and flagella-associated protein 46 1 LAHACS(1)ELK 82.671 0.040748 3485700 1429.9 1459.5 1752.6 1258.2 985.72 1242.9 1565.1 1236 1382.3 1483.9 TRUE FALSE 1308.279496 1364.486285 1633.638395 1355.106782 946.4566851 1313.271924 1460.695035 1225.193782 1525.995032 1667.736735 0.78446404 0.818166474 0.979554123 0.812542384 0.567509647 0.787457574 0.875854686 0.734644597 0.915009545 1 10.70367585 -8.488543308 4.525009845 0.99953492 0.797871207 0.319397608 0.098604412 0.223704408 11.44043967 0.10158784 0.026511582 3.25E-09 8.488543308 -0.201663713 LAHCEELR ddPTM_A459_MK2206_30min_R1 1 LAHCEELR 8 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 0 125.31 0.0071951 4077000 1191.5 1404.8 1282.8 915.81 1165.1 1652 1551.2 1127.1 1249.2 1229.1 FALSE TRUE 1090.156668 1313.347265 1195.72711 986.3458449 1118.6916 1745.534812 1447.722278 1117.245884 1379.05881 1381.370187 0.789185027 0.95075692 0.865609466 0.714034409 0.809842003 1.263625658 1.048033533 0.808795422 0.998326751 1 10.43188428 LAHCEELR ddPTM_A459_MK2206_30min_R2 2 LAHCEELR 8 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 0 ; 127.46 0.00643 2966500 14497.9 16525.4 14531.4 16884 17412.1 17026.3 18852.1 16273.1 13971.6 14541.2 FALSE TRUE 15607.87037 15704.77267 15015.86962 15504.52319 16728.41347 17674.24778 16376.79662 18400.05004 15186.82451 14066.72183 1.109559893 1.116448655 1.067474697 1.102212966 1.189219042 1.256458184 1.164222682 1.3080553 1.07962784 1 13.77999854 -6.251529129 7.977377274 1.18612203 1.097787981 0.111706589 0.08228547 0.241062061 123.270854 0.023271492 0.028814015 5.60E-07 6.251529129 -0.088334049 LAHEVGWK ddPTM_A459_MK2206_30min_R1 2 LAHEVGWK 8 0 Q8J015;M0QYS1;P40429 Q8J015 RPL13a;RPL13A 60S ribosomal protein L13a 0 ; 96.253 0.029825 24749400 26139 25767 27178 24310 26966 24454 27081 25813 23090 21784 FALSE TRUE 23915.74079 24089.56362 25333.23308 26182.36041 25891.88712 25838.56435 25274.4759 25587.31966 25490.28813 24482.76638 0.976839807 0.98393961 1.034737361 1.069420016 1.057555618 1.055377646 1.032337421 1.045115542 1.041152284 1 14.57947896 -5.284933612 3.729062716 1.045928249 0.978340598 0.660812087 0.017649994 0.116725169 3.568555467 0.004560781 0.011680443 5.19E-06 5.284933612 -0.067587651 LAIQGPEDS(ph)PSR ddPTM_A459_MK2206_30min_R1 4 LAIQGPEDSPSR 12 0 Q15773 Q15773 MLF2 Myeloid leukemia factor 2 1 LAIQGPEDS(0.993)PS(0.007)R;LAIQGPEDS(0.997)PS(0.003)R;LAIQGPEDS(0.952)PS(0.048)R;LAIQGPEDS(0.954)PS(0.046)R 246.77 3.36E-18 515542000 26157.3 25368 25263.9 21296 26341.6 23773.6 25276.2 23598.4 21783.7 20445 TRUE FALSE 23932.48428 23716.53859 23549.05686 22936.22161 25292.35829 25119.64069 23590.07082 23392.08168 24048.19357 22977.88095 1.041544446 1.032146465 1.024857641 0.998186981 1.100726318 1.093209628 1.026642573 1.018026063 1.046580127 1 14.48795814 -4.367024264 17.84160625 1.03989611 2.038857846 0 0.032952755 4559.596712 681954.8273 0.0084301 57259.05755 4.30E-05 4.367024264 0.998961735 LAIQGPEDS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 LAIQGPEDSPSR 12 0 Q15773 Q15773 MLF2 Myeloid leukemia factor 2 1 LAIQGPEDS(0.5)PS(0.5)R;LAIQGPEDS(0.71)PS(0.29)R 191.63 0.00014396 281840000 111262 136164 114935 114593 114441 138693 138774 103373 106023 122882 TRUE FALSE 119780.3043 129402.2938 118766.8755 105230.3853 109947.4713 143971.0593 120552.8071 116884.206 115244.6889 118872.3704 1.007637888 1.088581756 0.999112537 0.885238386 0.924920324 1.211139803 1.014136478 0.983274798 0.969482551 1 16.8590539 -8.749433548 0.003370262 0.364528887 1.645562567 0.003616272 0.084702959 257220.1833 460.2934922 88019.53267 86924.94252 1.78E-09 8.749433548 1.28103368 LAIQGPEDSPS(ph)R ddPTM_A459_MK2206_30min_R1 1 LAIQGPEDSPSR 12 0 Q15773 Q15773 MLF2 Myeloid leukemia factor 2 1 LAIQGPEDS(0.236)PS(0.764)R 103.11 0.010997 7486800 2213.7 1714.3 2096.4 1768 1710.3 1631.3 2042.2 1870.7 1576.6 1710.8 TRUE FALSE 2025.41319 1602.698758 1954.102209 1904.171666 1642.175129 1723.662796 1905.968564 1854.344667 1740.493212 1922.74682 1.053395678 0.833546436 1.016307602 0.990339262 0.854077673 0.896458534 0.991273809 0.964424774 0.905211853 1 10.90895309 -10.25399795 7.833344834 0.999998497 0.942986322 0.055076544 0.067877395 0 0 0.063437675 0.015385896 5.57E-11 10.25399795 -0.057012175 LAIQGPEDSPS(ph)R ddPTM_A459_MK2206_30min_R2 4 LAIQGPEDSPSR 12 0 Q15773 Q15773 MLF2 Myeloid leukemia factor 2 1 LAIQGPEDS(0.028)PS(0.972)R;LAIQGPEDS(0.226)PS(0.774)R;LAIQGPEDS(0.091)PS(0.909)R;LAIQGPEDS(0.228)PS(0.772)R 199.33 0.00010404 300095000 185726 214364 182688 218218 217591 213164 214481 163677 188164 184971 TRUE FALSE 199945.3254 203718.9955 188778.7267 200388.8914 209047.284 221276.1054 186319.3871 185070.1459 204530.1646 178935.4114 1.117416188 1.138505754 1.055010438 1.119895105 1.168283474 1.236625571 1.041266151 1.034284631 1.143039061 1 17.4490794 -8.842175592 0.606368827 1.001094787 1.128065967 0.267002212 0.058607698 1.906469472 1.398450565 0.07238901 0.02695395 1.44E-09 8.842175592 0.12697118 LAIRES(ph)IESEIR ddPTM_A459_MK2206_30min_R1 1 LAIRESIESEIR 12 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 LAIRES(0.998)IES(0.002)EIR 67.846 0.03908 3566100 1125.3 1151.9 962.16 959.11 1068.9 1040.7 1271.1 1011.7 1054.1 993.29 TRUE FALSE 1029.587326 1076.911101 896.8512599 1032.980818 1026.32345 1099.623535 1186.307238 1002.854814 1163.677467 1116.346264 0.922283129 0.964674792 0.803380894 0.92532295 0.919359416 0.985020123 1.0626696 0.898336695 1.042398317 1 10.12456887 -6.729126392 3.440683185 0.996579195 0.903284675 0.404245942 0.055445002 0.253920088 6.245210143 0.019575605 0.018620538 1.87E-07 6.729126392 -0.09329452 LALAGEGEACPLLGS(ph)PGAGR ddPTM_A459_MK2206_30min_R2 1 LALAGEGEACPLLGSPGAGR 20 0 Q96F46-2;Q96F46 Q96F46-2 IL17RA Interleukin-17 receptor A 1 LALAGEGEACPLLGS(1)PGAGR 97.095 0.0027052 0 4267.8 4608.3 3714 4109 3638.7 4253.7 4160.7 2860.3 5114.4 7655.9 TRUE FALSE 4594.546049 4379.458523 3837.822906 3773.281556 3495.826355 4415.577534 3614.395092 3234.151031 5559.241267 7406.08861 0.620374167 0.59133218 0.518198351 0.509483717 0.472020595 0.596209115 0.488030225 0.436688136 0.750631212 1 12.8544961 -8.532636278 3.873153567 0.99926415 0.530231182 0.875820393 0.056121758 0.062764799 2.816424196 0.056757778 0.014898358 2.93E-09 8.532636278 -0.469032968 LALDGETLGEEEQEDEQPPWAS(ph)PSPTSR ddPTM_A459_MK2206_30min_R2 1 LALDGETLGEEEQEDEQPPWASPSPTSR 28 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 LALDGETLGEEEQEDEQPPWAS(0.717)PS(0.185)PT(0.086)S(0.012)R 62.831 0.0013698 2335400 3909 4118.8 4140.1 2625.4 3738.3 2732.5 4287 2705.6 2979.9 3811.3 TRUE FALSE 4208.276046 3914.266381 4278.128868 2410.896422 3591.515559 2836.487202 3724.11175 3059.23121 3239.086316 3686.937593 1.141401485 1.061657889 1.160347513 0.653902151 0.974118891 0.769334205 1.010082665 0.829748574 0.87853028 1 11.84820728 -5.730487129 24.99999965 0.872101321 1.115188044 0.535582839 0.105547958 147.3613795 119022.0874 0.02649251 0.045880163 1.86E-06 5.730487129 0.243086722 LALDGETLGEEEQEDEQPPWASPS(ph)PTSR ddPTM_A459_MK2206_30min_R1 1 LALDGETLGEEEQEDEQPPWASPSPTSR 28 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 LALDGETLGEEEQEDEQPPWAS(0.307)PS(0.546)PT(0.088)S(0.059)R 114.76 2.83E-12 8379200 1229.9 1396.1 1156 1087.3 1629 1488.6 1409.4 1352.8 1234 1279.2 TRUE FALSE 1125.290547 1305.213636 1077.533941 1171.044034 1564.113481 1572.883246 1315.381498 1340.972612 1362.278716 1437.676953 0.782714464 0.907862947 0.749496567 0.81453906 1.087945019 1.094044974 0.914935372 0.932735695 0.947555508 1 10.48952382 -6.240810753 24.43788144 0.993668284 0.815799869 0.63972384 0.067089262 440.9743647 522403.7829 0.021478809 0.027694561 5.74E-07 6.240810753 -0.177868415 LALPGFST(ph)PR ddPTM_A459_MK2206_30min_R1 2 LALPGFSTPR 10 0 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBM4 H0YBF7 ASAP1 "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1" 1 LALPGFS(0.04)T(0.96)PR;LALPGFS(0.093)T(0.907)PR 115.23 0.010412 6098400 10483.1 9685.1 9457.9 8260.3 9267 8281.4 9724.2 8218.6 7813.1 7558.2 TRUE FALSE 9591.457296 9054.59823 8815.924099 8896.509737 8897.875767 8750.285711 9075.516361 8146.745647 8625.299704 8494.566877 1.129128469 1.065928182 1.037830913 1.04731764 1.047478452 1.030103811 1.068390713 0.959053683 1.01539017 1 13.05232467 -1.522878745 0.281135283 1.000881069 1.851749072 0.619133311 0.026466925 37.1974016 0.524770701 0.030130682 15.56811999 0.03 1.522878745 0.850868003 LALPGHAESYNPPPEYLLS(ph)EEER ddPTM_A459_MK2206_30min_R2 1 LALPGHAESYNPPPEYLLSEEER 23 0 Q14137;Q14137-2 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 LALPGHAESYNPPPEY(0.001)LLS(0.999)EEER 137.58 2.89E-06 4341600 8442 10555 11413 11392 12302 11135 12423 8776.9 10948 10317 TRUE FALSE 9088.326011 10030.85405 11793.50372 10461.23716 11818.96167 11558.75023 10791.84518 9924.070966 11900.23725 9980.357135 0.910621322 1.00505963 1.181671514 1.048182647 1.184222319 1.158149961 1.081308517 0.994360305 1.192365873 1 13.28487573 -5.002965765 4.133222099 1.106649411 0.922350158 0.435359585 0.07080654 0.174782001 7.084397641 0.01758692 0.069146968 9.93E-06 5.002965765 -0.184299253 LALS(ph)PLSLGK ddPTM_A459_MK2206_30min_R1 1 LALSPLSLGK 10 0 P49454 P49454 CENPF Centromere protein F 1 LALS(0.936)PLS(0.064)LGK 122.55 0.0044309 50174000 13720 12243 12032 8850.8 10548 9046.5 10296 9511.9 9394.6 8484.2 TRUE FALSE 12553.04195 11445.97847 11215.30136 9532.49015 10127.85082 9558.705012 9609.172626 9428.738461 10371.20229 9535.286748 1.3164829 1.20038115 1.176189207 0.999706711 1.062144337 1.002455958 1.007748679 0.988825896 1.087665485 1 13.21906061 -5.299910616 1.165484045 1.016501633 1.330246495 0.866886206 0.038657622 0.242702607 0.487123626 0.012063153 0.074667343 5.01E-06 5.299910616 0.313744862 LALS(ph)PLSLGK ddPTM_A459_MK2206_30min_R2 1 LALSPLSLGK 10 0 P49454 P49454 CENPF Centromere protein F 1 LALS(0.999)PLS(0.001)LGK 163.46 0.00039167 43899000 524470 477070 459470 501840 476010 456230 528080 428800 406870 512870 TRUE FALSE 564623.8264 453379.3975 474788.5005 460838.0667 457319.4556 473592.1523 458742.4617 484845.6323 442258.8171 496135.0939 1.138044523 0.913822471 0.956974232 0.928856016 0.921763974 0.954562897 0.924632156 0.977245186 0.891408051 1 18.92037348 -4.756871402 24.99999856 0.939744663 1.13804482 0.79089591 0.030384347 54.41931237 297794.243 0.006770584 0.052762793 1.75E-05 4.756871402 0.198300157 LALSPLS(ph)LGK ddPTM_A459_MK2206_30min_R1 1 LALSPLSLGK 10 0 P49454 P49454 CENPF Centromere protein F 1 LALS(0.198)PLS(0.802)LGK 126.66 0.0034191 51438000 9540.3 8597.4 8397.3 6976.5 7143.2 6547.1 8171.1 7204.4 6551.7 5732 TRUE FALSE 8728.847387 8037.707697 7827.314672 7513.831239 6858.671218 6917.791144 7626.020828 7141.41269 7232.77266 6442.123434 1.354964318 1.247679865 1.215020909 1.166359402 1.064660013 1.0738371 1.183774404 1.108549497 1.122731151 1 12.65332059 -1.522878745 0.407441365 1.085207632 5.826108883 0.774943628 0.046261285 36.67710088 0.480600694 0.033840054 140.3932253 0.03 1.522878745 4.740901251 LALSPLS(ph)LGK ddPTM_A459_MK2206_30min_R2 1 LALSPLSLGK 10 0 P49454 P49454 CENPF Centromere protein F 1 LALS(0.362)PLS(0.638)LGK 144.17 0.0010097 50528000 422560 453060 397300 440120 465690 435160 488760 358220 369940 445970 TRUE FALSE 454911.5185 430561.6992 410545.7837 404160.7881 447404.6707 451720.3187 424585.2249 405040.584 402116.7125 431418.0354 1.054456423 0.998015066 0.951619427 0.936819407 1.03705602 1.047059422 0.984161973 0.938858719 0.932081368 1 18.71872696 -7.588155809 5.750763418 0.95246916 1.00115822 0.216448052 0.039640813 0.331168787 20.72106759 0.020580397 0.011731728 2.58E-08 7.588155809 0.04868906 LALVAAMMS(ph)GIAVVLAMAPFDVACT(ph)R ddPTM_A459_MK2206_30min_R2 1 LALVAAMMSGIAVVLAMAPFDVACTR 26 0 Q3KQZ1-3;Q3KQZ1-2;Q3KQZ1-4;Q3KQZ1 Q3KQZ1-3 SLC25A35 Solute carrier family 25 member 35 2 LALVAAMMS(1)GIAVVLAMAPFDVACT(1)R 50.426 0.031188 0 11317 19670 18441 15803 15569 12586 21960 12124 17560 14809 TRUE FALSE 12183.43822 18693.2164 19055.81374 14511.84435 14957.68283 13064.96905 19076.62562 13708.64843 19087.33706 14325.78354 0.850455278 1.3048652 1.33017602 1.012987828 1.044109231 0.911989841 1.331628777 0.956921371 1.332376481 1 13.80632643 -12.00504837 1.901102128 0.000103309 1.121153172 0.037638248 0.181105018 3514670.139 268604.5241 15103053.82 0.044173348 9.88E-13 12.00504837 1.121049863 LALVTGGEIASTFDHPELVK ddPTM_A459_MK2206_30min_R1 1 LALVTGGEIASTFDHPELVK 20 0 F8VQ14;F5GWF6;P78371-2;P78371 F8VQ14 CCT2 T-complex protein 1 subunit beta 0 78.166 0.0070223 3407500 742.25 929.53 874.92 929.07 847.37 554.87 817.95 549.09 873.45 714.95 FALSE TRUE 679.1177398 869.0174281 815.5328681 1000.627132 813.6174586 586.2862599 763.3860479 544.289364 964.2482532 803.5234036 0.84517481 1.081508546 1.014946005 1.2452993 1.012562241 0.729644286 0.950048305 0.677378358 1.200025101 1 9.650196235 -6.540597836 24.52535971 0.891162247 1.057193904 0.130234391 0.162853588 318.1905231 440410.4441 0.051391961 0.051402574 2.88E-07 6.540597836 0.166031657 LANDFPLDLS(ph)PVKK ddPTM_A459_MK2206_30min_R2 1 LANDFPLDLSPVKK 14 1 Q96JM2;Q96JM2-3 Q96JM2 ZNF462 Zinc finger protein 462 1 LANDFPLDLS(1)PVKK 59.733 0.047285 3984800 28468 23793 26748 21017 29635 17032 25393 18506 20798 25595 TRUE FALSE 30647.53197 22611.47422 27639.76497 19299.84387 28471.381 17680.16469 22058.8686 20924.79774 22606.97245 24759.83725 1.237792142 0.913231941 1.116314485 0.779481855 1.149901783 0.714066273 0.890913312 0.845110472 0.913050123 1 14.59571421 -1.522878769 0.664775004 0.893336719 30.96620171 0.327179399 0.130865889 268.4728804 1.637487276 0.050358107 11920.26788 0.029999998 1.522878769 30.07286499 LAPGGHVGR ddPTM_A459_MK2206_30min_R1 2 LAPGGHVGR 9 0 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 0 ; 161.9 0.0013095 29920000 15169.9 15804.1 15180.7 13368.3 15490.8 15086.6 17037.1 15485.3 8349.2 12663.7 FALSE TRUE 13879.62034 14775.25022 14150.27638 14397.92878 14873.76863 15940.79025 15900.58614 15349.91365 9217.129218 14232.57476 0.975200944 1.038129113 0.994217604 1.011617998 1.045051151 1.120021537 1.117196741 1.078505746 0.647607996 1 13.79690906 -8.23441427 24.98408192 0.823803929 1.04886857 0.492046342 0.090901646 493.2529046 456002.1738 0.058710259 0.022177863 5.83E-09 8.23441427 0.225064641 LAPGGHVGR ddPTM_A459_MK2206_30min_R2 4 LAPGGHVGR 9 0 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 0 ;;; 148.04 0.0022122 34109100 115904 141872 126253 146819 143199 143509 140038 110339 120291 133165 FALSE TRUE 124777.6994 134826.8428 130462.212 134823.418 137576.2877 148970.3356 121650.8424 124760.6862 130753.6937 128819.837 0.968621777 1.046631062 1.012749396 1.046604477 1.067974397 1.156423879 0.944348675 0.968489707 1.015012104 1 16.97499525 LAPPS(ph)PAR ddPTM_A459_MK2206_30min_R1 3 LAPPSPAR 8 0 O75145-2;O75145 O75145-2 PPFIA3 Liprin-alpha-3 1 LAPPS(1)PAR;LAPPS(1)PAR;LAPPS(1)PAR 119.22 0.0079825 120864000 3983.9 3894.66 3429.3 3286.1 3805.1 3464.31 3872.59 3561.99 3037.19 3178.14 TRUE FALSE 3645.048385 3641.116926 3196.528671 3539.195991 3653.53481 3660.456238 3614.256587 3530.847897 3352.916769 3571.871977 1.020486851 1.019386179 0.894916921 0.99085186 1.022862755 1.024800514 1.011866218 0.988514684 0.938700152 1 11.80246466 -5.064001865 24.99998323 0.985691299 1.020218272 0.124877379 0.037794105 421.6448434 164698.7323 0.010251208 0.027122203 8.63E-06 5.064001865 0.034526972 LAPPS(ph)PAR ddPTM_A459_MK2206_30min_R2 2 LAPPSPAR 8 0 O75145-2;O75145 O75145-2 PPFIA3 Liprin-alpha-3 1 LAPPS(1)PAR;LAPPS(1)PAR 117.71 0.0087284 122970000 140071 169224 152383 154732 139444 149177 152209 147270 129989 143127 TRUE FALSE 150794.9435 160820.5822 157463.3732 142089.9006 133968.7279 154854.0353 132223.7755 166518.6947 141295.2083 138456.7777 1.089112039 1.16152192 1.137274576 1.026240123 0.967585192 1.11842871 0.954982325 1.202676369 1.020500481 1 17.07907615 -5.755105405 24.90792742 1.046454673 1.132524778 0.241722044 0.070824724 209.9644472 825660.0205 0.018818008 0.031577041 1.76E-06 5.755105405 0.086070105 LAPS(ph)EDELTCFSK ddPTM_A459_MK2206_30min_R1 2 LAPSEDELTCFSK 13 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 LAPS(1)EDELTCFSK;LAPS(0.998)EDELT(0.002)CFSK 152 0.00045032 24315000 6665 6777.8 7474.8 6581 7353.3 6198.2 6743.1 7219.8 6663.9 5734.4 TRUE FALSE 6098.106751 6336.563988 6967.431402 7087.86976 7060.40249 6549.136728 6293.280102 7156.67805 7356.636252 6444.820765 0.946202691 0.983202516 1.081090019 1.099777638 1.095515725 1.016186015 0.976486443 1.110454163 1.141480348 1 12.65392452 -5.128111868 3.771973827 1.066386459 0.953067217 0.399876133 0.049951205 0.243489239 5.973161181 0.013828444 0.044362797 7.45E-06 5.128111868 -0.113319242 LAPS(ph)EDELTCFSK ddPTM_A459_MK2206_30min_R2 2 LAPSEDELTCFSK 13 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 LAPS(1)EDELTCFSK;LAPS(0.99)EDELT(0.009)CFS(0.002)K 127.36 0.0019353 9641700 20811.1 23747 21594 25641 25046 23863 26213 18846.2 19173.5 24618.8 TRUE FALSE 22404.41382 22567.75851 22313.93318 23546.04828 24062.56819 24771.12319 22771.20161 21309.46305 20841.17637 23815.49057 0.940749625 0.947608383 0.93695039 0.988686259 1.01037466 1.040126514 0.956150852 0.894773214 0.875110102 1 14.53961265 -7.582645014 6.103109838 0.914879369 0.97796506 0.235796328 0.042739502 0.267756246 19.82970877 0.021484891 0.012289713 2.61E-08 7.582645014 0.063085691 LAPVPS(ph)PEPQKPAPVS(ph)PESVK ddPTM_A459_MK2206_30min_R1 2 LAPVPSPEPQKPAPVSPESVK 21 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 LAPVPS(1)PEPQKPAPVS(0.975)PES(0.025)VK;LAPVPS(1)PEPQKPAPVS(0.974)PES(0.026)VK 85.046 0.0022318 119862000 11706 11494.4 12606.6 12013.6 10249 8048.8 9890.8 9938.2 9733.2 8911.6 TRUE FALSE 10710.34323 10746.11247 11750.89912 12938.88955 9840.760627 8504.5161 9231.002779 9851.311365 10745.00097 10015.63629 1.069362237 1.072933577 1.173255376 1.291868952 0.982539735 0.849123896 0.921659145 0.983593162 1.072822601 1 13.28996646 -6.426776289 8.615656229 0.956669275 1.147321218 0.565016593 0.078788979 0.266354014 21.86316795 0.026433923 0.029953852 3.74E-07 6.426776289 0.190651943 LAPVPS(ph)PEPQKPAPVS(ph)PESVK ddPTM_A459_MK2206_30min_R2 4 LAPVPSPEPQKPAPVSPESVK 21 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 LAPVPS(1)PEPQKPAPVS(0.988)PES(0.012)VK;LAPVPS(1)PEPQKPAPVS(0.911)PES(0.089)VK;LAPVPS(1)PEPQKPAPVS(0.919)PES(0.081)VK;LAPVPS(1)PEPQKPAPVS(0.899)PES(0.101)VK 92.236 0.0011924 38778500 228716 249170 235005 250720 236845 187405 257501 216316 199922 260634 TRUE FALSE 246226.6728 236796.5801 242839.9494 230235.374 227545.2752 194536.8286 223690.8094 244589.2439 217310.8542 252129.5339 0.976587982 0.939186205 0.963155508 0.913163049 0.902493539 0.771574934 0.887205897 0.970093587 0.861901622 1 17.9438056 -5.92298228 2.861973621 0.891007452 0.958131907 0.169686658 0.058456251 0.446107806 7.397347447 0.017884955 0.028155152 1.19E-06 5.92298228 0.067124455 LAPVPS(ph)PEPQKPAPVSPESVK ddPTM_A459_MK2206_30min_R1 2 LAPVPSPEPQKPAPVSPESVK 21 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 LAPVPS(1)PEPQKPAPVSPESVK;LAPVPS(1)PEPQKPAPVSPESVK 95.429 0.00022927 147366000 14186.6 15926.2 16691.3 14257.3 14884.7 13184.9 13847.2 13558.8 12884.4 12370.3 TRUE FALSE 12979.95517 14889.40149 15558.34106 15355.39972 14291.81088 13931.41764 12923.47855 13440.25684 14223.77949 13902.82616 0.933619901 1.070962214 1.119077581 1.104480452 1.027978824 1.002056524 0.92955766 0.966728397 1.023085474 1 13.76309056 -6.708279239 2.849525955 0.976818218 1.062353516 0.298843751 0.052141071 0.310589129 5.143913725 0.01986848 0.01903509 1.96E-07 6.708279239 0.085535298 LAPVPS(ph)PEPQKPAPVSPESVK ddPTM_A459_MK2206_30min_R2 2 LAPVPSPEPQKPAPVSPESVK 21 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 LAPVPS(1)PEPQKPAPVSPESVK;LAPVPS(1)PEPQKPAPVSPESVK 86.573 0.00056055 104935000 198602 240103 207897 239110 224004 188618 240228 201718 182642 201794 TRUE FALSE 213807.1218 228179.8342 214828.1822 219573.9481 215208.4774 195795.9902 208685.775 228083.2352 198527.871 195209.4783 1.095270187 1.16889731 1.100500775 1.12481192 1.102448914 1.003004525 1.069035053 1.168402463 1.016999137 1 17.57466358 -7.642845418 0.014286095 6.10E-07 2.152346384 0.346260587 0.047872999 651.473584 8.141609666 606.3095521 618.3433376 2.28E-08 7.642845418 2.152345775 LAPWQAS(ph)PPHPCR ddPTM_A459_MK2206_30min_R2 2 LAPWQASPPHPCR 13 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 LAPWQAS(1)PPHPCR;LAPWQAS(1)PPHPCR 105.58 0.0047967 13905600 32138 38044 34543 33687 32763 36632 46676 35820 33187 30750 TRUE FALSE 34598.50999 36154.79028 35694.64638 30934.66434 31476.56 38026.05643 40547.38513 40501.79699 36073.54527 29746.63002 1.163106879 1.215424748 1.199955973 1.039938451 1.058155495 1.278331576 1.363091722 1.361559174 1.212693513 1 14.86043861 -6.783194215 24.88377259 1.273229991 1.138059104 0.168735483 0.109853909 318.8182693 364670.2434 0.038685034 0.034146337 1.65E-07 6.783194215 -0.135170887 LAQALHEMR ddPTM_A459_MK2206_30min_R2 1 LAQALHEMR 9 0 P20700;E9PBF6;A0A0D9SFE5 P20700 LMNB1 Lamin-B1 0 104.42 0.020176 1613200 13584 16316 14741 16154 15556 20807 17255 14263 18159 17052 FALSE TRUE 14624.00148 15505.77117 15232.45758 14834.16653 14945.19328 21598.82497 14989.39777 16127.22307 19738.437 16495.59464 0.886539819 0.939994678 0.923425794 0.899280496 0.906011187 1.309369286 0.908690963 0.977668488 1.196588388 1 14.00979316 LAQANGWGVMVSHR ddPTM_A459_MK2206_30min_R1 1 LAQANGWGVMVSHR 14 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 185.32 0.00011126 15238000 4129.3 4575.7 3912.9 3668.9 4510 3696.1 3974.5 3253.9 3466.4 3338 FALSE TRUE 3778.081351 4277.821098 3647.30325 3951.479314 4330.35715 3905.369988 3709.368357 3225.451495 3826.744685 3751.536641 1.00707569 1.140285037 0.972215814 1.053296207 1.154288913 1.041005423 0.98875973 0.859768091 1.020047264 1 11.87326593 -7.306319636 3.475085285 0.951331897 1.065761405 0.337891049 0.064799125 0.251455785 6.255599513 0.028069217 0.01874821 4.94E-08 7.306319636 0.114429508 LAQANGWGVMVSHR ddPTM_A459_MK2206_30min_R2 2 LAQANGWGVMVSHR 14 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 141.65 0.0007764 12914200 35075 44905 42906 45737 49831 54279 50452 40193 39845 44459 FALSE TRUE 37760.36897 42675.083 44336.46463 42000.14079 47874.38456 56344.62538 43827.5918 45446.3631 43310.64608 43008.30647 0.877978513 0.992252114 1.030881433 0.976558815 1.11314275 1.310087051 1.019049467 1.056688041 1.007029796 1 15.3923277 -4.745604334 0.903176894 1.083966761 0.768307075 0.302742099 0.089278176 3.052107544 1.860955314 0.033581472 0.970855109 1.80E-05 4.745604334 -0.315659686 LAQSNGWGVMVSHR ddPTM_A459_MK2206_30min_R1 2 LAQSNGWGVMVSHR 14 0 P13929-3;P13929-2;P13929 P13929-3 ENO3 Beta-enolase 0 ; 145.7 0.00071931 68757000 9107.9 9381.8 9761.5 8935.2 10141 8810.8 10163.6 8719.7 6165.8 7292.7 FALSE TRUE 8333.225278 8771.043115 9098.916577 9623.390652 9737.062496 9309.659882 9485.604789 8643.464582 6806.756975 8196.174733 1.016721281 1.07013862 1.11014185 1.174131954 1.188000843 1.135854247 1.157320957 1.054573001 0.830479729 1 13.00073503 -8.057123642 5.106636602 0.918241508 1.123633735 0.642531617 0.060839995 0.134066375 7.286199145 0.04377456 0.016333098 8.77E-09 8.057123642 0.205392227 LAQT(ph)TPVDSALGSSR ddPTM_A459_MK2206_30min_R2 1 LAQTTPVDSALGSSR 15 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 LAQT(0.564)T(0.41)PVDS(0.026)ALGSSR 133.9 0.0011644 36916000 69408 54297 60068 73407 59670 63503 74071 56717 55964 76376 TRUE FALSE 74721.92985 51600.68994 62070.63714 67409.41328 57327.05598 65919.65116 64345.38872 64130.10664 60831.64756 73883.85737 1.011343107 0.69840276 0.840110944 0.912369977 0.775907729 0.89220641 0.870899152 0.867985361 0.823341522 1 16.17297157 -11.77801503 2.157139976 1.529040356 0.851046562 0.234321203 0.07852634 9036438.728 1297877.412 23344257.23 0.020184847 1.67E-12 11.77801503 -0.677993794 LAS(ph)PELER ddPTM_A459_MK2206_30min_R1 3 LASPELER 8 0 P05412;P17535 P05412;P17535 JUN;JUND Transcription factor AP-1;Transcription factor jun-D 1 LAS(1)PELER;LAS(1)PELER;LAS(1)PELER 145.46 0.001989 136579200 13011.2 12215.5 13433 12043.9 13832.8 11841 11322.3 12398.5 10557.4 9683.9 TRUE FALSE 11904.52912 11420.26873 12521.20539 12971.52326 13281.81028 12511.42719 10567.01003 12290.10122 11654.87951 10883.61464 1.093802887 1.049308443 1.150463867 1.191839632 1.220349187 1.149565434 0.970909976 1.12922973 1.070864772 1 13.40987016 -7.2170735 24.75212341 1.053520221 1.14445228 0.398117141 0.059504227 490.5236821 273667.8453 0.024649438 0.019093255 6.07E-08 7.2170735 0.090932058 LAS(ph)PELER ddPTM_A459_MK2206_30min_R2 4 LASPELER 8 0 P05412;P17535 P05412;P17535 JUN;JUND Transcription factor AP-1;Transcription factor jun-D 1 LAS(1)PELER;LAS(1)PELER;LAS(1)PELER;LAS(1)PELER 117.01 0.0090683 254993300 172363 213844 195546 183455 219043 190477 193633 148621 172770 173915 TRUE FALSE 185559.2438 203224.8179 202065.406 168466.1397 210442.2712 197725.7357 168208.7545 168046.275 187797.2223 168240.1678 1.102942575 1.207944693 1.201053284 1.00134315 1.250844397 1.175258788 0.999813283 0.998847524 1.116244859 1 17.36016267 -7.258288972 24.9957246 1.028630374 1.158152103 0.43436938 0.071452709 266.1499203 2111679.121 0.028006504 0.020789797 5.52E-08 7.258288972 0.129521729 LAS(ph)PMKPVPGTPPSSK ddPTM_A459_MK2206_30min_R1 1 LASPMKPVPGTPPSSK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 LAS(1)PMKPVPGTPPSSK 157.7 0.00035283 8602000 1539.3 1433.4 1745.2 1455.2 1293.3 1367.7 1495 1392 1720.1 1507.3 TRUE FALSE 1408.374452 1340.085399 1626.740686 1567.279756 1241.785122 1445.137992 1395.271278 1379.829891 1898.91055 1694.035704 0.831372355 0.791060895 0.960275325 0.925175162 0.733033619 0.853074105 0.823637468 0.81452232 1.120938919 1 10.72624857 -8.256245858 24.94585029 1.060469469 0.842757006 0.63528982 0.066352804 245.2975606 1178243.408 0.049160847 0.017317512 5.54E-09 8.256245858 -0.217712463 LAS(ph)PMKPVPGTPPSSK ddPTM_A459_MK2206_30min_R2 1 LASPMKPVPGTPPSSK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 LAS(0.998)PMKPVPGT(0.002)PPSSK 147.53 0.0033189 0 16227 21303 25224 21834 20547 16892 24508 19400 18983 21965 TRUE FALSE 17469.3516 20245.124 26064.95557 20050.09236 19740.22154 17534.8369 21290.07016 21935.64661 20634.10703 21248.28385 0.822153531 0.952788665 1.226685212 0.943609964 0.92902663 0.825235441 1.001966573 1.032349095 0.971095227 1 14.3750587 -7.472859655 24.99585178 1.004465702 0.957408804 0.051034273 0.105452305 1513.870056 756522.6737 0.047645283 0.032121516 3.37E-08 7.472859655 -0.047056898 LAS(ph)PQPSYAADANDSK ddPTM_A459_MK2206_30min_R2 2 LASPQPSYAADANDSK 16 0 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 LAS(0.997)PQPS(0.003)YAADANDSK;LAS(1)PQPSYAADANDSK 183.71 1.11E-13 0 43623 39249 43028 35441 37511 36412 46734 34493 26176 41694 TRUE FALSE 46962.81042 37299.95173 44462.53204 32545.35693 36038.12966 37797.68418 40597.76966 39001.35353 28452.74116 40333.52819 1.164361575 0.924787724 1.102371502 0.806905778 0.89350303 0.937128138 1.00655141 0.966971036 0.705436455 1 15.29969199 -1.522878745 0.834047987 0.914676782 74.64638902 0.317965641 0.104276303 765.1686173 2.282590077 0.035763763 106917.8123 0.03 1.522878745 73.73171224 LAS(ph)PSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR ddPTM_A459_MK2206_30min_R1 3 LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR 38 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 LAS(0.523)PS(0.212)GS(0.255)T(0.009)S(0.001)SGLEVVAPEGTSAPGGGPGTLDDSATICR;LAS(0.787)PS(0.095)GS(0.112)T(0.004)S(0.002)S(0.001)GLEVVAPEGTSAPGGGPGTLDDSATICR;LAS(0.468)PS(0.179)GS(0.179)T(0.075)S(0.075)S(0.023)GLEVVAPEGTSAPGGGPGTLDDSATICR 124.68 2.63E-25 153291000 6640.4 6782 6856.7 5493.2 6326.3 5756.1 6493.4 5982.8 6138.9 6367.1 TRUE FALSE 6075.59911 6340.490567 6391.286308 5916.287216 6074.310075 6082.005408 6060.237134 5930.49301 6777.060623 7155.904417 0.849033016 0.886050204 0.893148641 0.826770017 0.84885288 0.849928262 0.846886261 0.828755202 0.947058573 1 12.8049184 -8.44695777 3.791772941 0.998966543 0.854931866 0.85104179 0.020582602 0.077661918 2.100608414 0.021335927 0.005619229 3.57E-09 8.44695777 -0.144034677 LAS(ph)PSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR ddPTM_A459_MK2206_30min_R2 1 LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR 38 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 LAS(0.266)PS(0.152)GS(0.176)T(0.176)S(0.176)S(0.054)GLEVVAPEGTSAPGGGPGTLDDSATICR 74.974 1.19E-06 65694000 15806 25553 14646 26180 9262.6 13216 39252 9950.1 25541 11933 TRUE FALSE 17016.11951 24284.07518 15134.29033 24041.01025 8898.903783 13718.94414 34098.16525 11250.61223 27762.51001 11543.62719 1.474070432 2.103678054 1.311051551 2.082621854 0.770893207 1.188443105 2.953851913 0.974616735 2.405007504 1 13.49480899 LAS(ph)PVAPGALTTPGGSAPAQVVHTQPPPR ddPTM_A459_MK2206_30min_R1 1 LASPVAPGALTTPGGSAPAQVVHTQPPPR 29 0 Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;Q96L91-4 Q96L91-3 EP400 E1A-binding protein p400 1 LAS(0.999)PVAPGALTTPGGSAPAQVVHTQPPPR 95.679 5.45E-05 0 902.08 693.12 828.03 679.64 826.47 961.5 853.58 867.57 599.06 750.95 TRUE FALSE 825.353359 647.997762 771.8256306 731.9859906 793.5499498 1015.939299 796.6392356 859.984927 661.3344308 843.9833554 0.977926109 0.767785002 0.914503379 0.867299083 0.940243602 1.203743288 0.943903965 1.018959582 0.783587054 1 9.721070737 -6.521899069 24.9999527 0.997635103 0.87952322 0.182353052 0.107324793 58.99969919 1505644.725 0.034947799 0.035386501 3.01E-07 6.521899069 -0.118111883 LAS(ph)PVAPGALTTPGGSAPAQVVHTQPPPR ddPTM_A459_MK2206_30min_R2 1 LASPVAPGALTTPGGSAPAQVVHTQPPPR 29 0 Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;Q96L91-4 Q96L91-3 EP400 E1A-binding protein p400 1 LAS(1)PVAPGALTTPGGSAPAQVVHTQPPPR 107.84 8.50E-11 4547600 9781.3 8194.3 7730.1 11207 8118.7 8925.6 10684 9339.3 6584 9814.3 TRUE FALSE 10530.16385 7787.382978 7987.817676 10291.35225 7799.919045 9265.269962 9281.177966 10559.97858 7156.664419 9494.060195 1.109131776 0.820237371 0.841348961 1.083977986 0.821557783 0.97590175 0.977577325 1.112272132 0.753804407 1 13.21280948 LAS(ph)SVLR ddPTM_A459_MK2206_30min_R1 4 LASSVLR 7 0 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 1 LAS(0.737)S(0.263)VLR;LAS(0.5)S(0.5)VLR;LAS(0.849)S(0.151)VLR;LAS(0.956)S(0.044)VLR 104.01 0.018263 22441600 13372.4 13094.4 12451.1 10528.5 13614.3 12680.6 13474.4 11401.4 10845.2 10586.7 TRUE FALSE 12235.00716 12241.95218 11605.95402 11339.40689 13072.0136 13398.56461 12575.54736 11301.71876 11972.59735 11898.26032 1.028302191 1.028885892 0.975432854 0.953030661 1.098649151 1.126094425 1.056923199 0.949863128 1.006247722 1 13.53846303 -3.242916359 2.622627093 1.02345669 13.83595259 0.000401447 0.055556336 86703.61813 297.042834 0.015731876 6694672.195 0.000571589 3.242916359 12.8124959 LAS(ph)SVLR ddPTM_A459_MK2206_30min_R2 2 LASSVLR 7 0 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 1 LAS(0.556)S(0.444)VLR;LAS(0.5)S(0.5)VLR 94.114 0.02482 12930800 49031 55718 44685 56775 51240 57012 61886 48185.7 54598 46001 TRUE FALSE 52784.85106 52951.12514 46174.7756 52136.30089 49228.06014 59181.63161 53760.29386 54483.73644 59346.83535 44499.99114 1.186176665 1.189913162 1.037635613 1.1716025 1.106248763 1.329924571 1.208096732 1.224353872 1.333637015 1 15.44151743 -6.731564597 24.99990536 1.232530565 1.137437836 0.144345561 0.095745538 337.2795377 282242.5787 0.029827468 0.029823252 1.86E-07 6.731564597 -0.095092729 LAS(ph)TPFK ddPTM_A459_MK2206_30min_R2 1 LASTPFK 7 0 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 LAS(0.614)T(0.386)PFK 80.165 0.0454 2122800 32828 30102 27271 32857 25220 24139 31405 25209 21266 33623 TRUE FALSE 35341.33692 28607.17845 28180.20153 30172.478 24229.73608 25057.62656 27281.48578 28503.90286 23115.67824 32525.88426 1.086560372 0.879520391 0.866393095 0.927645126 0.744937044 0.770390325 0.838762309 0.876345209 0.71068562 1 14.98930066 -1.522880328 0.926484765 0.826636672 153.7001724 0.44244618 0.081518062 893.0678872 1.749617483 0.025338805 289033.9013 0.029999891 1.522880328 152.8735357 LAS(ph)TSDIEEK ddPTM_A459_MK2206_30min_R1 2 LASTSDIEEK 10 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LAS(0.454)T(0.112)S(0.434)DIEEK;LAS(0.333)T(0.333)S(0.333)DIEEK 214.04 9.01E-05 101859000 10597.5 13556.3 11183.6 7343.4 5384.1 4790.4 5655.2 4157 5465.6 5770 TRUE FALSE 9696.126975 12673.78241 10424.48839 7908.98994 5169.639896 5061.628308 5277.951926 4120.655787 6033.768679 6484.831161 1.495201145 1.954373536 1.607518859 1.219613856 0.79718959 0.780533553 0.813891957 0.635429926 0.93044345 1 12.6628533 -5.938630963 2.156025487 0.802340444 1.737693509 0.882721773 0.140480112 0.087446638 0.823072841 0.041888946 0.068806113 1.15E-06 5.938630963 0.935353065 LAS(ph)TSDIEEK ddPTM_A459_MK2206_30min_R2 5 LASTSDIEEK 10 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LAS(0.945)T(0.016)S(0.039)DIEEK;LAS(0.457)T(0.457)S(0.086)DIEEK;LAS(0.46)T(0.46)S(0.079)DIEEK;LAS(0.759)T(0.224)S(0.017)DIEEK;LAS(0.495)T(0.495)S(0.01)DIEEK 132.56 0.0024188 180084700 1798103 1704529 1675024 1459515 1311898 1056605 1154135 896394 737588 1139699 TRUE FALSE 1935767.148 1619884.568 1730868.464 1340267.956 1260386.293 1096814.844 1002595.688 1013555.774 801742.071 1102510.715 1.755780803 1.469268776 1.569933462 1.21565073 1.143196411 0.994833727 0.909375006 0.91931603 0.727196625 1 20.07236125 -5.962846395 0.716550745 0.858105734 1.745390012 0.914085408 0.091846231 0.229312086 0.226295702 0.047786657 0.129562398 1.09E-06 5.962846395 0.887284278 LAS(ph)TSDIEEKENR ddPTM_A459_MK2206_30min_R1 3 LASTSDIEEKENR 13 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LAS(0.333)T(0.333)S(0.333)DIEEKENR;LAS(0.973)T(0.023)S(0.003)DIEEKENR;LAS(0.743)T(0.216)S(0.041)DIEEKENR 211.77 2.56E-05 62007000 25255.4 25679.5 24890.7 21006.2 18749.5 11796.8 10230.3 13084.9 6669.7 4721.95 TRUE FALSE 23107.29561 24007.75988 23201.18863 22624.10116 18002.66771 12464.72462 9547.855353 12970.5001 7363.039183 5306.940815 4.354164935 4.523841648 4.37185743 4.263115409 3.392287259 2.348758928 1.799126029 2.444063454 1.387435707 1 12.37366474 -6.680284791 1.154316795 1.650292097 4.506603879 0.933712859 0.331332941 0.11076051 0.31330367 0.162755323 0.158885762 2.09E-07 6.680284791 2.856311783 LAS(ph)TSDIEEKENR ddPTM_A459_MK2206_30min_R2 1 LASTSDIEEKENR 13 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LAS(0.333)T(0.333)S(0.333)DIEEKENR 190.03 0.00076279 8577700 21839 37719 33899 33136 34323 18498 24413 16505 19897 20353 TRUE FALSE 23511.01063 35845.92931 35029.17574 30428.6828 32975.30656 19201.95435 21207.54377 18662.26017 21627.60509 19688.88328 1.194126163 1.820617696 1.779134715 1.545475301 1.674818531 0.97526884 1.077132892 0.947857728 1.09846784 1 14.26509367 -6.761928833 24.99991517 1.02007321 1.621541442 0.756651081 0.165167314 6.205333055 316940.0878 0.055379148 0.051833204 1.73E-07 6.761928833 0.601468232 LAS(ph)YLDR ddPTM_A459_MK2206_30min_R1 4 LASYLDR 7 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 LAS(0.992)Y(0.008)LDR;LAS(1)YLDR;LAS(1)YLDR;LAS(1)YLDR 106.42 0.017128 88151000 18734.2 19729.1 19703.2 13683.1 18622.3 16396.5 21799.4 18001.1 16640.7 17277.8 TRUE FALSE 17140.75791 18444.732 18365.80168 14736.97473 17880.53436 17324.85566 20345.2018 17843.71828 18370.56031 19418.3043 0.882711366 0.949863166 0.945798428 0.758921814 0.920808227 0.892191995 1.047733184 0.91891228 0.946043487 1 14.2451296 -7.166895032 18.2998877 0.97141447 0.892097146 0.337136226 0.059085259 7.31233479 1411.251623 0.023087597 0.017883624 6.81E-08 7.166895032 -0.079317324 LAS(ph)YLDR ddPTM_A459_MK2206_30min_R2 5 LASYLDR 7 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 LAS(1)YLDR;LAS(0.984)Y(0.016)LDR;LAS(0.999)Y(0.001)LDR;LAS(0.999)Y(0.001)LDR;LAS(0.994)Y(0.006)LDR 95.502 0.023749 33124240 102239.8 110907.1 91794.6 131148.6 94069.4 94647.1 134850.5 88184.1 85745.3 118117.8 TRUE FALSE 110067.3577 105399.6147 94854.98615 120433.3399 90375.7627 98248.96171 117144.4674 99710.06465 93203.2712 114263.6259 0.963275556 0.922424909 0.830141573 1.053995433 0.790940792 0.8598446 1.025212236 0.872631722 0.815686274 1 16.80200669 -4.850855351 4.416497676 0.903689576 0.96365139 0.036764685 0.086869882 0.75345629 23.98430016 0.021141859 0.111536393 1.41E-05 4.850855351 0.059961814 LASDDRPS(ph)PPR ddPTM_A459_MK2206_30min_R1 1 LASDDRPSPPR 11 1 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 LASDDRPS(1)PPR 120.9 0.021827 303040000 6351.2 5952 5797.3 5235.3 6319.3 5662.5 6069.3 5535.4 5315.1 5114.1 TRUE FALSE 5810.997089 5564.523718 5403.795428 5638.523713 6067.5889 5983.105857 5664.428071 5487.004581 5867.623665 5747.673317 1.011017288 0.968135002 0.94017094 0.981009776 1.055660015 1.040961364 0.985516705 0.954647955 1.020869375 1 12.48876235 -6.017102025 24.83313273 1.008671004 0.970607114 0.232962204 0.030813449 1043.595397 1515363.766 0.009867003 0.013044803 9.61E-07 6.017102025 -0.038063889 LASDDRPS(ph)PPR ddPTM_A459_MK2206_30min_R2 4 LASDDRPSPPR 11 1 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 LASDDRPS(1)PPR;LAS(0.166)DDRPS(0.834)PPR;LASDDRPS(1)PPR;LASDDRPS(1)PPR 151.3 0.0028403 528348000 1699709 2114809 1746509 2287140 2010671 2153325 2078099 1548116 1831251 1777320 TRUE FALSE 1829840.028 2009790.66 1804736.738 2100273.346 1931721.954 2235271.292 1805242.105 1750460.077 1990529.902 1719326.194 1.06427741 1.168940872 1.049676754 1.221567701 1.123534301 1.300085638 1.049970687 1.018108188 1.157738368 1 20.71341185 LASDS(ph)DAESDSR ddPTM_A459_MK2206_30min_R1 1 LASDSDAESDSR 12 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 LAS(0.077)DS(0.923)DAESDSR 110.8 0.0074179 0 1409.7 1266.5 1457.3 1324.2 1678.3 1203.6 1586.8 1265.4 992.81 1140.5 TRUE FALSE 1289.797612 1184.05062 1358.382536 1426.190113 1611.449757 1271.746792 1480.947467 1254.336741 1096.016152 1281.79375 1.006244267 0.92374504 1.059751256 1.112651792 1.257183347 0.992161798 1.155371109 0.97857923 0.85506436 1 10.32394843 -7.97463347 9.181733292 0.923884108 1.071577486 0.294767354 0.092875912 0.319377041 107.7677065 0.054181385 0.025663315 1.06E-08 7.97463347 0.147693378 LASLGDTAS(ph)PLVK ddPTM_A459_MK2206_30min_R1 1 LASLGDTASPLVK 13 0 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 LASLGDT(0.012)AS(0.988)PLVK 162.94 0.00036318 14002000 4717.4 4512 3782.4 3978.6 3645.4 3766 3584.7 3858.4 3443.8 3216 TRUE FALSE 4316.160358 4218.26798 3525.661226 4285.032461 3500.195999 3979.227665 3345.571204 3824.666416 3801.795334 3614.42236 1.194149418 1.167065595 0.975442512 1.185537282 0.968397063 1.100930458 0.925617117 1.058168093 1.051840365 1 11.81954939 -1.522878746 0.465109243 1.018310385 5.805908763 0.381057427 0.072143559 93.99951055 1.093233649 0.040874475 431.3808951 0.03 1.522878746 4.787598378 LASLGDTAS(ph)PLVK ddPTM_A459_MK2206_30min_R2 2 LASLGDTASPLVK 13 0 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 LASLGDT(0.232)AS(0.768)PLVK;LASLGDT(0.08)AS(0.92)PLVK 153 0.00042345 10757700 95068 105545 93650 103696 94468 82247 97500 63563 73403 92650 TRUE FALSE 102346.4792 100303.7888 96772.24426 95223.70509 90758.71166 85376.96722 84698.13288 71870.90234 79787.46026 89626.83809 1.141917771 1.119126714 1.079723957 1.062446329 1.012628735 0.952582609 0.945008601 0.801890414 0.890218398 1 16.45164318 -6.501570287 0.929023403 0.888073777 1.125594716 0.767060295 0.048580261 0.250669843 0.471194034 0.025891264 0.031558707 3.15E-07 6.501570287 0.237520939 LASPMKPVPGT(ph)PPSSK ddPTM_A459_MK2206_30min_R1 1 LASPMKPVPGTPPSSK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 LAS(0.02)PMKPVPGT(0.94)PPS(0.031)S(0.009)K 129 0.0093976 8540100 1692.5 1954.2 2229.4 1701.1 1672.8 2001.1 1808.4 1615.3 1839.3 2117.1 TRUE FALSE 1548.543987 1826.981225 2078.074539 1832.119017 1606.168834 2114.400553 1687.764936 1601.177602 2030.501817 2379.382331 0.650817637 0.767838443 0.873367223 0.76999774 0.675036043 0.888634216 0.709329019 0.672938343 0.853373495 1 11.21637139 -8.550184438 6.675377149 0.999988313 0.757140042 0.505568042 0.076491367 0.207180628 45.38277112 0.074121031 0.019185935 2.82E-09 8.550184438 -0.242848271 LASPS(ph)GSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR ddPTM_A459_MK2206_30min_R2 1 LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR 38 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 LAS(0.099)PS(0.398)GS(0.398)T(0.035)S(0.035)S(0.035)GLEVVAPEGTSAPGGGPGTLDDSATICR 85.708 1.35E-09 66130000 16588 26873 23978 21208 27376 23239 28066 9070.6 25015 26535 TRUE FALSE 17857.99003 25538.5259 24777.41455 19475.23856 26301.08069 24123.37643 24380.90049 10256.15856 27190.75948 25669.16512 0.695698125 0.994910655 0.965259853 0.758701674 1.024617691 0.939780328 0.949812757 0.3995517 1.059277127 1 14.64774875 LASPSGS(ph)TSSGLEVVAPEGTSAPGGGPGTLDDSATICR ddPTM_A459_MK2206_30min_R1 1 LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR 38 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 LAS(0.043)PS(0.177)GS(0.631)T(0.062)S(0.062)S(0.024)GLEVVAPEGTSAPGGGPGTLDDSATICR 97.734 3.07E-14 28282000 2075.3 1856.6 1997.4 1629.2 1889.2 1568.5 1983.5 1735.6 1561 1387.8 TRUE FALSE 1898.784837 1735.735003 1861.822053 1754.681266 1813.949164 1657.307115 1851.184334 1720.425832 1723.271536 1559.731141 1.217379577 1.112842436 1.1936814 1.12498957 1.162988361 1.062559483 1.186861174 1.103027173 1.104851657 1 10.60708165 -14.52287874 0.117879203 0.533424869 1.211593164 0.576262899 0.040675129 110.4994438 0.845952812 12.23494336 0.388031876 3.00E-15 14.52287874 0.678168295 LASPSGS(ph)TSSGLEVVAPEGTSAPGGGPGTLDDSATICR ddPTM_A459_MK2206_30min_R2 1 LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR 38 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 LAS(0.076)PS(0.184)GS(0.578)T(0.07)S(0.07)S(0.024)GLEVVAPEGTSAPGGGPGTLDDSATICR 76.452 9.97E-07 109730000 57282 49331 48981 53157 51299 59926 64981 43264 40573 48822 TRUE FALSE 61667.55396 46881.29427 50614.00209 48813.90306 49284.7435 62206.52592 56448.91664 48918.75335 44101.9662 47228.94214 1.305715334 0.992639093 1.071673423 1.033559103 1.043528423 1.317127234 1.195218739 1.035779146 0.933791108 1 15.5273836 -7.974062851 5.755905036 0.971484996 1.128080472 0.300562 0.105690951 0.22670441 22.77226002 0.064879372 0.029221802 1.06E-08 7.974062851 0.156595476 LASS(ph)VLR ddPTM_A459_MK2206_30min_R2 3 LASSVLR 7 0 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 1 LAS(0.222)S(0.778)VLR;LAS(0.222)S(0.778)VLR;LAS(0.137)S(0.863)VLR 95.815 0.023547 13292200 92644 112403 90207 114608 94820 111259 126129 87477 94969 95186 TRUE FALSE 99736.89587 106821.2305 93214.45636 105244.1598 91096.89037 115493.0392 109568.1108 98910.54425 103229.232 92080.08862 1.083153778 1.160090439 1.01231936 1.142963277 0.989322358 1.254267247 1.189921865 1.074179508 1.121080936 1 16.4906016 -4.459374672 14.84436677 1.109960638 0.848272813 0.002853814 0.08270615 1563515.5 9696775.026 0.020168601 12219611.01 3.47E-05 4.459374672 -0.261687826 LAST(ph)PFK ddPTM_A459_MK2206_30min_R2 1 LASTPFK 7 0 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 LAS(0.025)T(0.975)PFK 105.14 0.034388 0 33757 33035 28888 31648 27672 24434 28859 27745 24044 31563 TRUE FALSE 36341.46187 31394.52994 29851.1115 29062.25716 26585.45824 25363.85299 25069.77863 31371.36676 26135.30366 30533.10189 1.190231572 1.028212923 0.977663901 0.951827864 0.870709381 0.830700172 0.821068843 1.027454298 0.855966215 1 14.89808654 -4.496173089 0.904976247 0.898453825 1.485644318 0.63933493 0.065455285 2.144608494 0.973864205 0.022879454 1.404819913 3.19E-05 4.496173089 0.587190493 LAST(ph)SDIEEK ddPTM_A459_MK2206_30min_R2 1 LASTSDIEEK 10 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LAS(0.258)T(0.673)S(0.069)DIEEK 126.71 0.007976 56847000 655440 567060 641110 640560 513690 499070 565790 381010 395460 466530 TRUE FALSE 705620.9903 538900.625 662484.2874 588224.199 493519.9495 518062.4586 491501.0934 430809.3152 429856.396 451307.1643 1.563504961 1.194088345 1.467923268 1.303378819 1.093534489 1.147915432 1.089061137 0.954581157 0.952469692 1 18.78375016 -6.413812535 0.636580983 0.958561247 1.452360392 0.764197495 0.096759412 0.414085126 0.366059792 0.06744698 0.107316213 3.86E-07 6.413812535 0.493799145 LASTLVHLGEYQAAVDGAR ddPTM_A459_MK2206_30min_R1 1 LASTLVHLGEYQAAVDGAR 19 0 A0A087WVQ6;Q00610-2;Q00610;J3KS13 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 181.86 4.91E-13 6220500 1390.5 1459.8 1419.8 1342.6 1655.8 1364.7 1580.3 1337.7 1100.1 1046.9 FALSE TRUE 1272.230673 1364.766755 1323.427932 1446.007285 1589.84598 1441.968135 1474.88107 1326.00463 1214.459332 1176.597876 1.081279084 1.159926244 1.124792046 1.228973224 1.351222888 1.225540318 1.253513287 1.126982002 1.032178756 1 10.20040562 -8.135388528 2.655456818 1.008241629 1.206135278 0.527925474 0.070338848 0.249128808 3.149634107 0.066876078 0.020947124 7.32E-09 8.135388528 0.197893649 LASVPAGGAVAVSAAPGS(ph)AAPAAGSAPAAAEEK ddPTM_A459_MK2206_30min_R1 2 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK 33 0 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 1 LASVPAGGAVAVSAAPGS(1)AAPAAGSAPAAAEEK;LASVPAGGAVAVSAAPGS(1)AAPAAGSAPAAAEEK 172.97 1.62E-35 12217800 5257.3 5741.4 5455.1 4003.9 4477.3 3927.3 4421.5 4570.2 4322.2 4450.9 TRUE FALSE 4810.139028 5367.633816 5084.823011 4312.281072 4298.95966 4149.660332 4126.549802 4530.243223 4771.508157 5002.311095 0.961583344 1.073030788 1.016494759 0.862057755 0.859394704 0.829548633 0.824928663 0.905630045 0.953860739 1 12.28837907 -5.75525339 24.2217538 0.880240147 1.022635825 0.496207402 0.057537775 73.8344837 289099.1683 0.015735816 0.02636911 1.76E-06 5.75525339 0.142395678 LASVPAGGAVAVSAAPGS(ph)AAPAAGSAPAAAEEK ddPTM_A459_MK2206_30min_R2 2 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK 33 0 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 1 LASVPAGGAVAVSAAPGS(1)AAPAAGSAPAAAEEK;LASVPAGGAVAVSAAPGS(0.887)AAPAAGS(0.113)APAAAEEK 182.43 5.87E-42 18227500 110535 122305 125327 125663 121276 103696 127633 90663 104120 112718 TRUE FALSE 118997.6446 116231.5115 129505.3396 115395.9309 116514.0949 107642.2239 110874.6338 102512.9654 113176.1694 109040.0209 1.091320816 1.065952763 1.187686306 1.058289699 1.068544319 0.987180882 1.016825133 0.940140735 1.037932389 1 16.73449822 -6.516598043 1.769870656 0.992374858 1.107480682 0.603532074 0.040259048 0.232866781 1.474326141 0.014990502 0.016427052 3.04E-07 6.516598043 0.115105824 LASYLDR ddPTM_A459_MK2206_30min_R2 1 LASYLDR 7 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 133.81 0.042994 24621000 63939 86542 61079 89701 72058 72107 70838 65615 66843 67241 FALSE TRUE 68834.219 82244.45012 63115.34338 82372.14136 69228.64086 74851.08241 61536.88551 74191.10579 72656.88332 65046.93168 1.05822392 1.264386313 0.970304698 1.266349376 1.06428757 1.150724261 0.946038251 1.140578101 1.116991708 1 15.98919338 LATNT(ph)SAPDLK ddPTM_A459_MK2206_30min_R2 1 LATNTSAPDLK 11 0 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 LATNT(0.753)S(0.247)APDLK 166.7 0.0013551 17379000 146220 180770 161770 135090 159350 127780 161550 119900 110770 160900 TRUE FALSE 157414.7156 171793.2247 167163.3311 124052.7149 153093.1183 132642.7574 140338.2909 135571.3417 120404.5744 155649.8462 1.011338716 1.103715994 1.073970422 0.796998635 0.983573849 0.852186884 0.901628202 0.871002092 0.77356051 1 17.24794463 -5.746100684 24.99417245 0.881051735 1.067079231 0.581247568 0.070095002 156.4364092 254908.6997 0.018060821 0.031133965 1.79E-06 5.746100684 0.186027497 LATNTS(ph)APDLK ddPTM_A459_MK2206_30min_R2 3 LATNTSAPDLK 11 0 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 LATNT(0.206)S(0.794)APDLK;LATNT(0.078)S(0.922)APDLK;LATNT(0.225)S(0.775)APDLK 161.87 0.00054005 70040000 652640 755840 663480 672790 673980 566890 780430 632720 500010 669970 TRUE FALSE 702606.6202 718306.0847 685600.0921 617820.9049 647516.1587 588463.3962 677958.6035 715418.6765 543499.966 648108.9338 1.084087232 1.108310729 1.057847001 0.953267071 0.999085377 0.907969888 1.046056563 1.103855601 0.838593541 1 19.3058768 -5.593050348 4.560138796 0.98376147 1.093880218 0.336610936 0.068523575 0.238682546 9.530398757 0.018639329 0.033837837 2.55E-06 5.593050348 0.110118748 LAVEEFVHATS(ph)EGEAPGGCEGR ddPTM_A459_MK2206_30min_R1 4 LAVEEFVHATSEGEAPGGCEGR 22 0 Q5C9Z4 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 1 LAVEEFVHAT(0.015)S(0.985)EGEAPGGCEGR;LAVEEFVHAT(0.005)S(0.995)EGEAPGGCEGR;LAVEEFVHAT(0.006)S(0.994)EGEAPGGCEGR;LAVEEFVHAT(0.032)S(0.968)EGEAPGGCEGR 149.9 1.73E-07 20010800 6590.4 4804.57 5828.2 4675.5 6618.5 5902.2 7242.9 6107.9 5190.7 5106.7 TRUE FALSE 6029.851872 4491.79162 5432.598022 5035.60782 6354.87113 6236.377463 6759.739356 6054.499274 5730.29184 5739.35655 1.050614615 0.782629826 0.946551756 0.877381946 1.107244527 1.086598717 1.177786969 1.054909069 0.998420605 1 12.48667329 -6.261897824 24.99998512 1.079708724 0.907193997 0.481789862 0.079072625 32.68477264 1782376.877 0.023291033 0.028061539 5.47E-07 6.261897824 -0.172514728 LAVLIT(ph)NS(ph)NVRHSLAS(ph)S(ph)EYPVRRR ddPTM_A459_MK2206_30min_R2 1 LAVLITNSNVRHSLASSEYPVRRR 24 3 P51570;P51570-2 P51570 GALK1 Galactokinase 4 LAVLIT(0.999)NS(0.999)NVRHS(0.097)LAS(0.819)S(0.819)EY(0.266)PVRRR 49.188 0.034127 4485800 9678.6 10321 9448.2 14726 15961 15222 11408 9241.5 10873 9785.1 TRUE FALSE 10419.60106 9808.474148 9763.198272 13522.83869 15334.29094 15801.28388 9910.115897 10449.39578 11818.71389 9465.812988 1.100761347 1.036199866 1.031416772 1.428597703 1.61996555 1.669300238 1.046937639 1.103908961 1.248568285 1 13.2085107 -3.71519455 15.22169122 1.244258217 1.179373692 0 0.241514566 0 0 0.061188365 0 0.000192666 3.71519455 -0.064884525 LAVLSSS(ph)LTHWK ddPTM_A459_MK2206_30min_R1 1 LAVLSSSLTHWK 12 0 F5GX19;F5H3Y3;Q6IAA8 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 LAVLS(0.002)S(0.017)S(0.816)LT(0.166)HWK 129.37 0.001534 17868000 5631.6 3295.6 3013.1 2714.2 7717.6 7466 11033 8435.9 8049.1 7322.5 TRUE FALSE 5152.602847 3081.055841 2808.579167 2923.248154 7410.19165 7888.718468 10297.0087 8362.145816 8885.832749 8229.666582 0.626101045 0.374384042 0.341274964 0.355208577 0.900424285 0.958570847 1.25120606 1.016097764 1.079731804 1 13.00661827 -6.407561954 2.872903593 1.070303505 0.412310165 0.888130902 0.106950507 0.08396035 1.336431748 0.036697258 0.041922785 3.91E-07 6.407561954 -0.65799334 LAVLSSS(ph)LTHWK ddPTM_A459_MK2206_30min_R2 1 LAVLSSSLTHWK 12 0 F5GX19;F5H3Y3;Q6IAA8 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 LAVLS(0.004)S(0.027)S(0.762)LT(0.208)HWK 115.24 0.003509 7036600 35266 25069 28558 32389 35710 56496 66449 31492 66828 49498 TRUE FALSE 37965.99207 23824.10991 29510.10947 29742.71509 34307.84597 58645.99487 57724.16648 35608.11253 72640.57864 47882.88431 0.792892755 0.4975496 0.616297658 0.621155461 0.716494974 1.224779913 1.205528182 0.743650117 1.517046846 1 15.54722244 -6.673209212 5.066979081 1.125604993 0.62777797 0.613871749 0.194423066 0.139002493 6.011486122 0.06244606 0.061857496 2.12E-07 6.673209212 -0.497827023 LAVLSSSLT(ph)HWK ddPTM_A459_MK2206_30min_R1 1 LAVLSSSLTHWK 12 0 F5GX19;F5H3Y3;Q6IAA8 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 LAVLSS(0.003)S(0.186)LT(0.811)HWK 189.3 0.00017471 17058000 4215.6 2797.6 2082.8 2116.8 5418.9 5187.9 8097.7 6247.4 5823.9 5360 TRUE FALSE 3857.041083 2615.475732 1941.425339 2279.836303 5203.053738 5481.634415 7557.517208 6192.77964 6429.315246 6024.037266 0.640275103 0.434173232 0.322279769 0.37845654 0.863715397 0.909960243 1.254560169 1.028011509 1.067276805 1 12.55651498 -6.485094718 2.238677656 1.073337051 0.432303152 0.863949248 0.113713277 0.106236774 1.061788883 0.041733068 0.046047422 3.27E-07 6.485094718 -0.641033899 LAVLSSSLT(ph)HWK ddPTM_A459_MK2206_30min_R2 1 LAVLSSSLTHWK 12 0 F5GX19;F5H3Y3;Q6IAA8 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 LAVLS(0.002)S(0.019)S(0.398)LT(0.581)HWK 119.88 0.005651 9838500 47640 36976 40553 37363 43858 74453 82418 35393 75161 72536 TRUE FALSE 51287.35503 35139.82561 41905.01678 34310.32338 42135.91455 77286.36109 71596.4176 40018.98662 81698.36792 70169.15626 0.730910243 0.500787347 0.597199952 0.488965882 0.60049054 1.101429249 1.020340295 0.570321616 1.164305975 1 16.09854939 -6.705156323 8.688216671 0.947180659 0.573365789 0.5892455 0.16109236 0.217380373 30.77430685 0.052463913 0.052317672 1.97E-07 6.705156323 -0.37381487 LAVNMVPFPR ddPTM_A459_MK2206_30min_R1 1 LAVNMVPFPR 10 0 P04350;K7ESM5;Q9BUF5;P68371;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P07437;Q5JP53;Q5ST81;A0A0B4J269;Q13509;Q13509-2;Q9BVA1;Q13885;Q3ZCM7;A0A075B736;Q5SQY0 P04350;P68371;P07437;A0A0B4J269;Q9BVA1;Q3ZCM7 TUBB4A;TUBB6;TUBB4B;TUBB1;TUBB;TUBB3;TUBB2B;TUBB2A;TUBB8 Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta-4B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-8 chain 0 128.61 0.042786 8340600 2388 2402.7 2272.5 2631.4 2576 2430.7 2390.6 2757.8 2297.1 2252.3 FALSE TRUE 2184.88806 2246.283793 2118.249032 2834.070884 2473.392465 2568.324133 2231.127436 2733.688845 2535.891765 2531.331928 0.863137717 0.887392036 0.836812039 1.119596704 0.977111077 1.014613732 0.881404533 1.079940886 1.001801359 1 11.30568098 -5.737861116 24.99999995 1.007353156 0.864941673 0.560542144 0.060067821 177.3665775 188060.052 0.016070083 0.027814277 1.83E-06 5.737861116 -0.142411483 LAWVGDVFTATPAEPRPLT(ph)SPLR ddPTM_A459_MK2206_30min_R2 1 LAWVGDVFTATPAEPRPLTSPLR 23 1 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 LAWVGDVFT(0.003)AT(0.003)PAEPRPLT(0.497)S(0.497)PLR 58.93 0.018585 20679000 28004 56053 39294 87984 82130 68665 58166 48172 54518 50901 TRUE FALSE 30148.00777 53269.48953 40604.04235 80795.42575 78905.16353 71278.09469 50528.73433 54468.2458 59259.87709 49240.10454 0.612265308 1.081831365 0.824613244 1.640845943 1.602457271 1.447561807 1.02617033 1.106176486 1.203488044 1 15.5875462 -5.732533296 24.99921785 1.302602795 0.863795703 0.432471837 0.235386331 222.635193 192542.8271 0.06882362 0.119180657 1.85E-06 5.732533296 -0.438807092 LAYIAHPK ddPTM_A459_MK2206_30min_R2 2 LAYIAHPK 8 0 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 0 ; 94.262 0.032186 10577200 161504 204620 165088 220600 220380 192889 211320 166731 196593 185499 FALSE TRUE 173868.8704 194458.8683 170591.9515 202576.2743 211726.7739 200229.5261 183573.4302 188523.3142 213692.3038 179446.1828 0.968919303 1.083661214 0.950658013 1.128897094 1.179890096 1.115819367 1.022999917 1.050584143 1.190843407 1 17.45319171 -5.77372438 24.99901935 1.101516489 1.009337671 0.304972448 0.066889085 282.0573066 573964.6503 0.018965831 0.028361224 1.68E-06 5.77372438 -0.092178817 LCAGIMITAS(ph)HNPK ddPTM_A459_MK2206_30min_R1 2 LCAGIMITASHNPK 14 0 Q96G03-2;Q96G03 Q96G03-2 PGM2 Phosphoglucomutase-2 1 LCAGIMITAS(1)HNPK;LCAGIMITAS(1)HNPK 128.74 0.00073425 83838000 8860.1 10136.9 10773.3 9042.2 9542.9 8180.6 9523.3 9973.9 9823.8 8763.4 TRUE FALSE 8106.501969 9476.985968 10042.03841 9738.631811 9162.786086 8643.778502 8888.018033 9886.699244 10845.01916 9849.076152 0.823072321 0.962220803 1.019591915 0.988786325 0.930319346 0.877623278 0.902421496 1.003819961 1.10112045 1 13.26577269 -7.961472272 5.142976903 1.051912921 0.934740217 0.429077344 0.057317306 0.183819746 11.74640431 0.035880186 0.016068054 1.09E-08 7.961472272 -0.117172704 LCAGIMITAS(ph)HNPK ddPTM_A459_MK2206_30min_R2 2 LCAGIMITASHNPK 14 0 Q96G03-2;Q96G03 Q96G03-2 PGM2 Phosphoglucomutase-2 1 LCAGIMIT(0.001)AS(0.999)HNPK;LCAGIMITAS(1)HNPK 142.74 0.00035963 33426000 153653 171952 168895 204250 183899 159583 197546 165322 172886 178728 TRUE FALSE 165416.7918 163413.1137 174525.875 187562.1216 176678.2012 165656.0429 171607.9729 186930.153 187923.3118 172896.12 0.956740914 0.945152001 1.009426209 1.08482551 1.021874876 0.958124699 0.992549589 1.081170318 1.086914569 1 17.39954597 -5.363707692 4.268420675 1.031374021 0.951047481 0.380777929 0.040678853 0.247569921 7.628858901 0.011948605 0.026688445 4.33E-06 5.363707692 -0.08032654 LCDDGPQLPT(ph)SPR ddPTM_A459_MK2206_30min_R1 2 LCDDGPQLPTSPR 13 0 O60504-2;O60504;H0YAZ3;H0YB51 O60504-2 SORBS3 Vinexin 1 LCDDGPQLPT(0.5)S(0.5)PR;LCDDGPQLPT(0.5)S(0.5)PR 214.61 4.00E-06 473210000 12209.1 11861.1 11419.9 9302.2 11688.5 11200.9 12640.2 10381.3 9738.4 10171.7 TRUE FALSE 11170.65193 11088.94023 10644.74901 10018.65706 11222.92229 11835.08528 11796.99532 10290.53739 10750.74153 11431.84699 0.977151981 0.970004256 0.93114866 0.876381311 0.981724327 1.035273241 1.031941324 0.900164024 0.940420349 1 13.48077089 LCDDGPQLPTS(ph)PR ddPTM_A459_MK2206_30min_R1 4 LCDDGPQLPTSPR 13 0 O60504-2;O60504;H0YAZ3;H0YB51 O60504-2 SORBS3 Vinexin 1 LCDDGPQLPT(0.001)S(0.999)PR;LCDDGPQLPT(0.028)S(0.972)PR;LCDDGPQLPT(0.003)S(0.997)PR;LCDDGPQLPT(0.009)S(0.991)PR 219.95 1.30E-08 406766000 25857.2 24388.2 25056.8 20958.1 25240.7 24524.1 27278.5 22238.1 22920.8 21514.3 TRUE FALSE 23657.90936 22800.52375 23356.01423 22572.29649 24235.30947 25912.63335 25458.80104 22043.67464 25303.49918 24179.65391 0.978422166 0.942963197 0.965936664 0.933524383 1.002301752 1.071670978 1.052901796 0.911662124 1.046478964 1 14.56150597 -6.39459082 5.702823616 1.015638348 0.955442448 0.322025204 0.042239641 0.29991256 12.67954769 0.013677865 0.015503663 4.03E-07 6.39459082 -0.0601959 LCDDGPQLPTS(ph)PR ddPTM_A459_MK2206_30min_R2 5 LCDDGPQLPTSPR 13 0 O60504-2;O60504;H0YAZ3;H0YB51 O60504-2 SORBS3 Vinexin 1 LCDDGPQLPT(0.03)S(0.97)PR;LCDDGPQLPT(0.02)S(0.98)PR;LCDDGPQLPT(0.002)S(0.998)PR;LCDDGPQLPTS(1)PR;LCDDGPQLPT(0.056)S(0.944)PR 241.41 6.85E-18 1123993800 720252 869044 715860 881188 811117 798871 835879 671742 690105 721939 TRUE FALSE 775395.0469 825888.5387 739726.4151 809192.1216 779268.471 829272.5957 726127.0832 759540.9858 750129.0855 698382.1896 1.110273226 1.182573884 1.0592 1.158666607 1.115819508 1.18741945 1.039727379 1.087572102 1.074095383 1 19.41365724 -8.302225861 0.639413709 1.002619605 1.134094189 0.465568583 0.042850617 0.64163294 0.612877257 0.041152036 0.01827838 4.99E-09 8.302225861 0.131474584 LCDFGSASHVADNDIT(ph)PYLVSR ddPTM_A459_MK2206_30min_R1 2 LCDFGSASHVADNDITPYLVSR 22 0 Q13523;H0YDJ3 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 LCDFGSASHVADNDIT(0.55)PY(0.401)LVS(0.049)R;LCDFGSASHVADNDIT(0.512)PY(0.415)LVS(0.073)R 134.04 2.63E-05 14075300 3131.3 2202.2 2725.9 1981.27 3438.6 2875.7 3290.4 2773.6 2226.77 2051.91 TRUE FALSE 2864.966492 2058.83638 2540.873503 2133.867759 3301.633281 3038.519649 3070.90342 2749.350708 2458.25071 2306.116102 1.242334022 0.892772215 1.101797737 0.925308035 1.431685628 1.317591793 1.331634351 1.192199606 1.065970056 1 11.17124943 -6.247400144 24.90184683 1.242933511 1.03437186 0.259140435 0.1489012 941.2574001 1669537.846 0.043357053 0.055678458 5.66E-07 6.247400144 -0.208561651 LCDFGSASHVADNDIT(ph)PYLVSR ddPTM_A459_MK2206_30min_R2 1 LCDFGSASHVADNDITPYLVSR 22 0 Q13523;H0YDJ3 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 LCDFGSASHVADNDIT(0.592)PY(0.408)LVSR 171.39 7.02E-12 132090000 54628 87723 75212 116910 111500 124230 102320 80828 95910 71997 TRUE FALSE 58810.36168 83366.80338 77719.53054 107358.079 107121.9498 128957.6597 88885.26109 91392.49712 104252.0784 69647.74379 0.844397226 1.196977804 1.115894447 1.541443745 1.538053409 1.85156981 1.276211637 1.312210449 1.496847892 1 16.087789 -5.678299905 5.005972638 1.459151574 1.053764638 0.372841806 0.223673991 0.213574107 9.247212751 0.061542605 0.10795088 2.10E-06 5.678299905 -0.405386936 LCDFGSASHVADNDITPY(ph)LVSR ddPTM_A459_MK2206_30min_R1 7 LCDFGSASHVADNDITPYLVSR 22 0 Q13523;H0YDJ3 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 LCDFGSASHVADNDIT(0.057)PY(0.938)LVS(0.005)R;LCDFGSASHVADNDIT(0.025)PY(0.974)LVS(0.001)R;LCDFGSASHVADNDIT(0.006)PY(0.992)LVS(0.002)R;LCDFGSASHVADNDITPY(0.998)LVS(0.002)R;LCDFGSASHVADNDIT(0.002)PY(0.982)LVS(0.016)R;LCDFGSASHVADNDIT(0.053)PY(0.947)LVSR;LCDFGSASHVADNDIT(0.25)PY(0.676)LVS(0.074)R 256.66 5.18E-53 1296012200 38997.4 25271.3 32785.5 23778.87 45922.8 42669.2 43084.2 37861.7 25914 24384.68 TRUE FALSE 35680.46635 23626.13378 30560.11161 25610.32269 44093.59763 45085.09323 40210.13163 37530.67915 28607.85303 27405.63825 1.301938894 0.862090259 1.115103079 0.934491014 1.608924311 1.645102837 1.467221134 1.369451016 1.043867425 1 14.74218511 -6.250682035 24.98045545 1.394273761 1.044147355 0.291897793 0.225792942 822.6425325 1910320.854 0.067427824 0.086163092 5.61E-07 6.250682035 -0.350126406 LCDFGSASHVADNDITPY(ph)LVSR ddPTM_A459_MK2206_30min_R2 8 LCDFGSASHVADNDITPYLVSR 22 0 Q13523;H0YDJ3 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 LCDFGSASHVADNDIT(0.291)PY(0.703)LVS(0.007)R;LCDFGSASHVADNDIT(0.111)PY(0.798)LVS(0.091)R;LCDFGSASHVADNDIT(0.311)PY(0.689)LVSR;LCDFGSASHVADNDIT(0.031)PY(0.967)LVS(0.001)R;LCDFGSASHVADNDIT(0.007)PY(0.992)LVS(0.001)R;LCDFGSASHVADNDIT(0.091)PY(0.771)LVS(0.137)R;LCDFGSASHVADNDIT(0.04)PY(0.959)LVSR;LCDFGSASHVADNDIT(0.186)PY(0.734)LVS(0.079)R 200.73 1.73E-27 279438200 194587.4 333692 261413.9 386524 371299 416073 378277 283626.1 333071 282356 TRUE FALSE 209485.161 317121.3405 270129.309 354943.7528 356719.9356 431906.9496 328608.7755 320697.0051 362040.9135 273142.7468 0.766943891 1.161009561 0.988967535 1.299480791 1.305983555 1.581249931 1.203066087 1.174100388 1.325464131 1 18.05929559 -4.257655053 0.848799809 1.281350921 2.12E-15 0.446755812 0.158264465 4.677488536 1.403537044 0.056342005 6.914019274 5.53E-05 4.257655053 -1.281350921 LCDFGSASHVADNDITPYLVSR ddPTM_A459_MK2206_30min_R1 1 LCDFGSASHVADNDITPYLVSR 22 0 Q13523;H0YDJ3 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 0 80.752 0.0015937 14651000 4229 3033.6 3683.3 2634.3 4777.8 4407.9 4527.2 3992.1 3028 2955.6 FALSE TRUE 3869.301343 2836.112089 3433.287858 2837.194242 4587.490109 4657.471489 4225.198748 3957.197491 3342.771436 3321.762042 1.164833993 0.853797489 1.033574294 0.854123266 1.381041162 1.402108709 1.271975143 1.191294693 1.006324774 1 11.69773301 -6.257115803 24.9990919 1.2311806 0.971882779 0.356722063 0.150924416 386.2957954 2233576.263 0.045838052 0.057084611 5.53E-07 6.257115803 -0.259297821 LCDPDGLS(ph)DEEDQKPVR ddPTM_A459_MK2206_30min_R2 1 LCDPDGLSDEEDQKPVR 17 1 Q96RY5 Q96RY5 CRAMP1L Protein cramped-like 1 LCDPDGLS(1)DEEDQKPVR 105.63 0.020762 0 15852 14156 12187 14052 14712 13267 15157 14314 11774 13998 TRUE FALSE 17065.64131 13453.03362 12593.3085 12903.90665 14134.33296 13771.88498 13166.86769 16184.88895 12798.08124 13541.24641 1.260271086 0.993485623 0.929996259 0.95293345 1.04379852 1.0170323 0.972352714 1.195228893 0.945118407 1 13.72507292 -10.50677262 15.05039387 1.000006215 1.03045528 0.008450893 0.104139599 0 0 0.098966031 0.024002788 3.11E-11 10.50677262 0.030449065 LCGPES(ph)PPPPYSR ddPTM_A459_MK2206_30min_R2 1 LCGPESPPPPYSR 13 0 O43541-4;O43541 O43541-4 SMAD6 Mothers against decapentaplegic homolog 6 1 LCGPES(1)PPPPYSR 90.412 0.025629 0 10258 11809 10082 8811.1 11776 8860.9 9203.9 6802.1 6797.4 7202.7 TRUE FALSE 11043.36037 11222.58223 10418.12885 8091.204945 11313.61507 9198.107759 7995.416874 7691.157825 7388.625565 6967.676489 1.584941606 1.610663505 1.495208462 1.161248654 1.623728525 1.320111198 1.147501163 1.103833945 1.060414555 1 12.76646193 -7.027962131 0.467539171 0.963029494 1.60733835 0.71449969 0.125109684 0.610658511 0.289322494 0.127228829 0.146606672 9.38E-08 7.027962131 0.644308857 LCLS(ph)TVDLEVK ddPTM_A459_MK2206_30min_R1 1 LCLSTVDLEVK 11 0 Q8N370-4;Q8N370-2;Q8N370;Q8N370-3 Q8N370-4 SLC43A2 Large neutral amino acids transporter small subunit 4 1 LCLS(0.915)T(0.085)VDLEVK 158.2 0.0005702 11504000 2505 2042.9 1494.9 1743.1 1938.9 2034.1 2641.9 2677.4 3005.2 2998 TRUE FALSE 2291.936596 1909.906839 1393.430353 1877.353864 1861.669507 2149.268984 2465.663671 2653.991774 3317.601294 3369.414874 0.680217985 0.566836353 0.413552621 0.557175039 0.552520119 0.63787603 0.731777998 0.787671413 0.984622381 1 11.71828236 -7.776766962 0.962931552 1.012238745 0.544444289 0.868931815 0.065278615 0.191682607 0.323186437 0.060805628 0.024928821 1.67E-08 7.776766962 -0.467794456 LCLST(ph)VDLEVK ddPTM_A459_MK2206_30min_R2 1 LCLSTVDLEVK 11 0 Q8N370-4;Q8N370-2;Q8N370;Q8N370-3 Q8N370-4 SLC43A2 Large neutral amino acids transporter small subunit 4 1 LCLS(0.315)T(0.685)VDLEVK 136.7 0.00326 4043200 25643 12256 17347 16140 15652 19819 31294 10655 23304 23798 TRUE FALSE 27606.2478 11647.38486 17925.34032 14821.31037 15037.42384 20573.22593 27185.06021 12047.64508 25330.9398 23021.47321 1.199152094 0.505935687 0.778635675 0.643803732 0.653191205 0.893653753 1.180856671 0.523322073 1.100317932 1 14.49069254 -6.87998411 6.690610684 0.928443859 0.737969451 0.131598906 0.233869601 0.451988523 24.70136655 0.079355367 0.070016932 1.32E-07 6.87998411 -0.190474408 LCPSCPAS(ph)SPK ddPTM_A459_MK2206_30min_R1 1 LCPSCPASSPK 11 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 LCPSCPAS(0.5)S(0.5)PK 191.79 2.00E-05 19414000 7001.9 9087.7 9791.2 8472.3 6120.8 5353.2 7850.4 8072.3 10019 9028.4 TRUE FALSE 6406.351637 8496.089078 9126.600624 9124.838014 5876.995575 5656.293558 7326.71414 8001.724732 11060.5109 10146.90635 0.631360083 0.837308317 0.89944662 0.899272911 0.579190876 0.557440205 0.722063837 0.78858762 1.090037743 1 13.30875232 -8.180959901 4.546561369 1.044639441 0.738082077 0.525592654 0.116785401 0.18965364 6.905738449 0.098225372 0.033830137 6.59E-09 8.180959901 -0.306557364 LCPSCPASS(ph)PK ddPTM_A459_MK2206_30min_R1 3 LCPSCPASSPK 11 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 LCPSCPAS(0.068)S(0.932)PK;LCPSCPAS(0.122)S(0.878)PK;LCPSCPAS(0.068)S(0.932)PK 196.27 2.05E-05 40976000 12172.7 15139.4 15002 12899.3 10694.1 9867.7 12229.4 13295.4 15882.4 14943.6 TRUE FALSE 11137.34794 14153.82231 13983.70604 13892.80632 10268.13135 10426.40065 11413.59904 13179.15972 17533.43232 16794.92599 0.663137661 0.842743953 0.832614925 0.827202593 0.611382947 0.620806585 0.679586147 0.784710795 1.043971991 1 14.03573782 -8.188449603 4.14400693 1.024056847 0.729918231 0.668257534 0.082148812 0.145395228 4.621592938 0.072071365 0.024016516 6.48E-09 8.188449603 -0.294138616 LCPSCPASS(ph)PK ddPTM_A459_MK2206_30min_R2 3 LCPSCPASSPK 11 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 LCPSCPAS(0.022)S(0.978)PK;LCPSCPAS(0.062)S(0.938)PK;LCPSCPAS(0.055)S(0.945)PK 216.91 1.88E-05 87230000 182677 178099 170784 145791 165804 121996 248368 180395 162056 223945 TRUE FALSE 196662.8916 169254.8626 176477.8533 133879.4089 159293.7019 126638.6433 215756.9833 203973.2459 176151.3379 216637.693 0.907796279 0.781280766 0.814622104 0.617987605 0.735300029 0.584564216 0.995934642 0.941540888 0.813114909 1 17.72492476 -7.27945506 24.99767278 0.932776024 0.739720151 0.489546513 0.098692752 779.1911281 1081162.958 0.042541537 0.028745974 5.25E-08 7.27945506 -0.193055873 LCS(ph)SSSSDTSSR ddPTM_A459_MK2206_30min_R1 1 LCSSSSSDTSSR 12 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LCS(0.378)S(0.378)S(0.231)S(0.002)S(0.01)DTSSR 215.77 2.16E-07 17271000 4251.9 4157.3 3854.7 3453.5 3715.6 3012.1 3850.7 3954.2 2308 3164.1 TRUE FALSE 3890.253577 3886.659014 3593.053704 3719.489168 3567.599784 3182.642499 3593.826829 3919.628846 2547.924859 3556.092596 1.093968583 1.092957765 1.010393742 1.045948346 1.003235908 0.894983022 1.01061115 1.10222913 0.716495645 1 11.79607718 -5.408995647 0.463769164 0.939542193 1.162021977 0.256058376 0.095105369 4.293659293 1.092269788 0.071522541 0.493998954 3.90E-06 5.408995647 0.222479784 LCS(ph)SSSSDTSSR ddPTM_A459_MK2206_30min_R2 1 LCSSSSSDTSSR 12 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LCS(0.404)S(0.404)S(0.185)S(0.005)S(0.002)DTSSR 99.732 0.014097 28600000 14083 35079 19330 32467 29243 26608 25350 22093 23359 18032 TRUE FALSE 15161.20531 33337.02787 19974.45255 29814.34224 28094.77289 27620.58609 22021.51455 24980.63096 25390.7236 17443.61732 0.869154891 1.91113043 1.145086606 1.709183462 1.610604749 1.583420777 1.262439673 1.432078594 1.455588204 1 14.09041163 -9.938508434 0.631372587 0.953455986 1.470195135 0.177663606 0.281645567 16.37433787 5.421478899 2.067132228 0.102299373 1.15E-10 9.938508434 0.516739149 LCSS(ph)SSSDTSSR ddPTM_A459_MK2206_30min_R2 2 LCSSSSSDTSSR 12 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LCS(0.073)S(0.856)S(0.032)S(0.039)S(0.001)DTSSR;LCS(0.053)S(0.611)S(0.332)S(0.004)SDTSSR 187.62 0.00010362 271740000 406970 488750 496210 542340 417010 407060 448750 339910 328730 373320 TRUE FALSE 438127.9361 464479.3857 512753.3937 498029.0871 400636.0921 422550.9535 389828.586 384337.4041 357322.3412 361138.599 1.213185014 1.286152704 1.419824398 1.379052498 1.109369348 1.170052037 1.079443147 1.064237955 0.989432706 1 18.4621931 -6.714009905 1.241454413 1.033554218 1.325425759 0.754972328 0.071050874 0.236850314 0.769510068 0.036990102 0.034863531 1.93E-07 6.714009905 0.291871541 LCSSAETLESHPDIGKS(ph)TPQK ddPTM_A459_MK2206_30min_R2 1 LCSSAETLESHPDIGKSTPQK 21 1 O96028-3;O96028;O96028-6;O96028-5 O96028-3;O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 LCSSAET(0.002)LES(0.039)HPDIGKS(0.479)T(0.479)PQK 54.974 0.014406 14695000 71120 77886 75078 92828 93823 63705 86673 60273 73997 69718 TRUE FALSE 76565.00188 74018.2945 77581.06305 85243.65546 90139.0376 66129.33842 75292.73099 68150.88805 80433.1253 67443.10737 1.135253177 1.097492351 1.150318633 1.263934282 1.33651964 0.980520338 1.116388819 1.010494485 1.19260705 1 16.04138339 -6.779254213 24.99966503 1.064182235 1.192350027 0.38880635 0.085529782 295.0355723 414022.6556 0.031445667 0.027791197 1.66E-07 6.779254213 0.128167792 LCSSAETLESHPDIGKST(ph)PQK ddPTM_A459_MK2206_30min_R2 1 LCSSAETLESHPDIGKSTPQK 21 1 O96028-3;O96028;O96028-6;O96028-5 O96028-3;O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 LCSSAETLES(0.012)HPDIGKS(0.163)T(0.825)PQK 69.522 0.0039109 13552000 64185 83364 89979 97177 94280 65827 101050 80873 67058 85405 TRUE FALSE 69099.05295 79224.26498 92978.85495 89237.32825 90578.09348 68332.09261 87782.01362 91443.37878 72890.58363 82618.24184 0.83636557 0.958919764 1.125403457 1.080116525 1.096344965 0.827082386 1.062501594 1.106818261 0.882257744 1 16.33417274 -4.877139108 3.716731014 1.026400199 0.8332695 0.268003213 0.093297207 0.317963099 7.424142661 0.023758681 0.141089512 1.33E-05 4.877139108 -0.193130699 LCSSS(ph)SSDTSSR ddPTM_A459_MK2206_30min_R1 1 LCSSSSSDTSSR 12 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LCS(0.193)S(0.193)S(0.394)S(0.015)S(0.204)DT(0.002)SSR 199.12 0.00011561 87368000 3040.4 3130.5 3420.5 2690.1 2554.7 2234.2 2864.4 3087.5 1896.9 2232.8 TRUE FALSE 2781.798014 2926.703881 3188.32599 2897.291968 2452.940889 2360.698473 2673.321102 3060.506313 2094.089543 2509.416121 1.108543932 1.166288786 1.270544954 1.154568166 0.977494673 0.940736155 1.065315983 1.219608931 0.834492743 1 11.29313601 -6.169208208 5.307418485 1.017252897 1.184377482 0.408460287 0.099099868 0.245289731 10.96520882 0.029879632 0.038869935 6.77E-07 6.169208208 0.167124585 LCSSS(ph)SSDTSSR ddPTM_A459_MK2206_30min_R2 1 LCSSSSSDTSSR 12 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LCS(0.114)S(0.114)S(0.72)S(0.033)S(0.019)DTSSR 163.46 0.00050106 35442000 23379 30268 27017 33977 26379 31084 27492 20019 25004 23716 TRUE FALSE 25168.91422 28764.93513 27917.7333 31200.97041 25343.22792 32266.9234 23882.26738 22635.55204 27178.80272 22942.14886 1.097060017 1.253803003 1.216875257 1.359984655 1.104657984 1.406447303 1.040977788 0.986636089 1.184666828 1 14.48571291 -7.303828246 24.97411496 1.051956425 1.23871847 0.440497385 0.103092804 444.4089359 261829.3935 0.040652324 0.027408059 4.97E-08 7.303828246 0.186762044 LCSSSSS(ph)DTSSR ddPTM_A459_MK2206_30min_R1 3 LCSSSSSDTSSR 12 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LCS(0.051)S(0.051)S(0.304)S(0.015)S(0.572)DT(0.008)SSR;LCS(0.048)S(0.048)S(0.306)S(0.011)S(0.587)DTSSR;LCS(0.043)S(0.043)S(0.073)S(0.073)S(0.766)DT(0.001)SSR 209.19 7.35E-06 109755600 9088.3 8119.9 8071.5 6574.1 8442.8 7310.9 8423.8 8295.6 5242.33 5901.6 TRUE FALSE 8315.29236 7591.293034 7523.629068 7080.438321 8106.505398 7724.83684 7861.863672 8223.072444 5787.288963 6632.734763 1.25367479 1.144519313 1.134317795 1.06749909 1.222196528 1.164653362 1.185312537 1.239771035 0.872534357 1 12.69538812 -8.262062963 24.99989466 0.936267162 1.171811068 0.723342743 0.059369841 28.88462533 1157870.018 0.047078444 0.014947224 5.47E-09 8.262062963 0.235543905 LCVT(ph)VLS(ph)LLMLVAAFCS(ph)PALS(ph)APNS(ph)KPK ddPTM_A459_MK2206_30min_R2 1 LCVTVLSLLMLVAAFCSPALSAPNSKPK 28 1 Q7M4M2 Q7M4M2 CCL4 5 LCVT(1)VLS(1)LLMLVAAFCS(1)PALS(1)APNS(1)KPK 40.669 0.030488 12717000 3487.6 11025 7428.7 18490 17365 22210 11330 10553 14019 6837.1 TRUE FALSE 3754.613338 10477.51453 7676.36915 16979.30785 16683.16285 23055.21711 9842.35739 11932.31333 15238.34728 6614.005987 0.567676132 1.584140467 1.160623254 2.567174552 2.522399115 3.485817394 1.488108328 1.804097752 2.303951238 1 12.69130864 -5.750439998 24.94552288 2.242294477 1.152145514 0.337627825 0.675763384 239.6475649 543492.1018 0.185601455 0.317558709 1.78E-06 5.750439998 -1.090148963 LCYVALDFEQEMATAASSSSLEK ddPTM_A459_MK2206_30min_R1 1 LCYVALDFEQEMATAASSSSLEK 23 0 P60709;A0A2R8Y793;Q6S8J3;A0A2R8YEA7;P63261;I3L4N8 P60709;P63261 ACTB;POTEE;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 0 87.062 0.0040395 0 0 0 0 0 0 150.76 0 0 0 0 FALSE TRUE 0 0 0 0 0 159.2959009 0 0 0 0 0 LDAQSLNLSQEDFDRYMSGQT(ph)SPR ddPTM_A459_MK2206_30min_R1 3 LDAQSLNLSQEDFDRYMSGQTSPR 24 1 E9PFK9;Q9UJ41;Q9UJ41-4;Q9UJ41-3;A0A0A0MSJ3;Q3HKR1 E9PFK9 RABGEF1 Rab5 GDP/GTP exchange factor 1 LDAQSLNLSQEDFDRY(0.017)MS(0.078)GQT(0.453)S(0.453)PR;LDAQSLNLSQEDFDRY(0.014)MS(0.084)GQT(0.451)S(0.451)PR;LDAQSLNLSQEDFDRY(0.013)MS(0.114)GQT(0.437)S(0.437)PR 88.071 0.00010923 28055100 2302.18 2684.54 2836.7 2760.08 2855.75 2404.27 2727.82 2907.3 2249.53 1390.14 TRUE FALSE 2106.367502 2509.775958 2644.152707 2972.66184 2741.99943 2540.39769 2545.852105 2881.881783 2483.376694 1562.361038 1.348195104 1.606399479 1.692408248 1.902672793 1.75503572 1.62599913 1.629490267 1.844568389 1.589502447 1 10.60951216 -14.0860651 11.96099006 1.213867964 1.639982987 0 0.250109343 0 0 0 0.053846399 8.20E-15 14.0860651 0.426115022 LDAQSLNLSQEDFDRYMSGQTS(ph)PR ddPTM_A459_MK2206_30min_R2 1 LDAQSLNLSQEDFDRYMSGQTSPR 24 1 E9PFK9;Q9UJ41;Q9UJ41-4;Q9UJ41-3;A0A0A0MSJ3;Q3HKR1 E9PFK9 RABGEF1 Rab5 GDP/GTP exchange factor 1 LDAQSLNLS(0.001)QEDFDRY(0.009)MS(0.102)GQT(0.372)S(0.517)PR 45.737 0.037601 7117200 4821.9 7298.5 6464.8 7869 9830 8475 11125 6850.8 7219.4 7182.5 TRUE FALSE 5191.068371 6936.067103 6680.333205 7226.077528 9444.024808 8797.522064 9664.274136 7746.223082 7847.330362 6948.135613 0.747116732 0.998263058 0.96145694 1.040002373 1.35921711 1.266170172 1.390916164 1.114863542 1.129415256 1 12.7624102 -5.957847213 2.813259792 1.227336117 0.907330065 0.542401947 0.126226379 0.201579109 3.245518507 0.038475995 0.059242324 1.10E-06 5.957847213 -0.320006052 LDDCGLTEAR ddPTM_A459_MK2206_30min_R2 1 LDDCGLTEAR 10 0 E9PMN0;E9PMA9;E9PIK5;E9PMJ3;E9PLZ3;E9PIM9;P13489 E9PMN0 RNH1 Ribonuclease inhibitor 0 133.58 0.031116 4643800 24455 30267 28695 30216 27928 23239 27084 21845 21545 26395 FALSE TRUE 26327.2936 28763.98479 29651.67698 27747.25614 26831.40639 24123.37643 23527.83827 24700.21651 23418.94516 25533.73331 1.031078898 1.126509173 1.161274641 1.086690137 1.050821909 0.944764956 0.921441372 0.96735625 0.917176696 1 14.64011687 -6.592300699 2.493484481 0.945069771 1.107169954 0.779553335 0.038125306 0.126645611 1.598447026 0.013833542 0.014185979 2.56E-07 6.592300699 0.162100184 LDDGHLNNSLS(ph)SPVQADVYFPR ddPTM_A459_MK2206_30min_R1 1 LDDGHLNNSLSSPVQADVYFPR 22 0 F8WF17;B9A055;U3KQ88;Q3ZCW2 F8WF17 LGALSL Galectin;Galectin-related protein 1 LDDGHLNNS(0.158)LS(0.684)S(0.158)PVQADVYFPR 75.193 0.0079429 0 1071.5 1006.3 951.59 915.38 1044.2 829.96 961.96 916.13 832.22 763.62 TRUE FALSE 980.3632983 940.7896871 886.9987221 985.8827262 1002.607303 876.951618 897.7894036 908.120372 918.7322471 858.2230106 1.142317657 1.096206552 1.03352941 1.148748885 1.168236333 1.021822542 1.046102694 1.058140321 1.07050526 1 9.745208773 -6.779169853 24.9998105 1.043372208 1.113644532 0.502798027 0.038813075 247.4868742 348952.2417 0.014482457 0.012798678 1.66E-07 6.779169853 0.070272323 LDDGHLNNSLS(ph)SPVQADVYFPR ddPTM_A459_MK2206_30min_R2 1 LDDGHLNNSLSSPVQADVYFPR 22 0 F8WF17;B9A055;U3KQ88;Q3ZCW2 F8WF17 LGALSL Galectin;Galectin-related protein 1 LDDGHLNNSLS(0.978)S(0.022)PVQADVYFPR 208.16 1.52E-23 11671000 8312 14231 11445 13518 12613 14262 15182 7914 12021 14410 TRUE FALSE 8948.373111 13524.30923 11826.57059 12413.53616 12117.75024 14804.7504 13188.58516 8948.386973 13066.56485 13939.80288 0.641929673 0.970193722 0.848403 0.890510165 0.869291363 1.062048763 0.946109875 0.641930668 0.937356501 1 13.76692254 -4.751453144 24.91242151 0.898619562 0.641929128 0.352462633 0.107332501 480.1749816 1197795.105 0.02716369 0.357196844 1.77E-05 4.751453144 -0.256690434 LDDGHLNNSLSS(ph)PVQADVYFPR ddPTM_A459_MK2206_30min_R2 2 LDDGHLNNSLSSPVQADVYFPR 22 0 F8WF17;B9A055;U3KQ88;Q3ZCW2 F8WF17 LGALSL Galectin;Galectin-related protein 1 LDDGHLNNSLS(0.216)S(0.784)PVQADVYFPR;LDDGHLNNSLS(0.249)S(0.751)PVQADVYFPR 166.36 7.72E-12 17452800 32232 38117 29875 35721 32978 31409 38859 22556.2 31205 36206 TRUE FALSE 34699.7067 36224.16521 30871.01759 32802.48003 31683.11802 32604.2915 33756.76662 25504.37279 33919.15449 35024.60119 0.990723821 1.034249184 0.881409539 0.936555419 0.904596111 0.930896867 0.963801599 0.728184531 0.968437993 1 15.096081 -5.260059129 24.99295526 0.907345738 1.012486509 0.229294544 0.071160676 153.6595311 2782329.494 0.017794751 0.042194099 5.49E-06 5.260059129 0.10514077 LDDQES(ph)PVYAAQQR ddPTM_A459_MK2206_30min_R2 1 LDDQESPVYAAQQR 14 0 Q96ST3;H3BMA2;H3BT34;H3BQ76;H3BQ88;H3BNA0;H3BNZ3;H3BQL7;H3BP90 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 LDDQES(1)PVYAAQQR 181.51 7.49E-05 4636200 22140 19023 18364 23352 16310 15627 21766 16313 16446 23871 TRUE FALSE 23835.05542 18078.34548 18976.24659 21444.0669 15669.58745 16221.69644 18908.09805 18445.16511 17876.44335 23092.09122 1.032173968 0.782880394 0.821763885 0.928632521 0.678569442 0.702478449 0.818812721 0.79876547 0.774137049 1 14.49511121 -4.758523364 24.93906392 0.802098186 1.032174289 0.342807765 0.090657536 85.82069742 733839.5545 0.022037904 0.149682593 1.74E-05 4.758523364 0.230076103 LDDS(ph)SEAK ddPTM_A459_MK2206_30min_R2 3 LDDSSEAK 8 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 LDDS(0.965)S(0.035)EAK;LDDS(0.91)S(0.09)EAK;LDDS(0.954)S(0.046)EAK 100.69 0.017641 20607600 272423 115556 132027 133546 141793 87620 186183 207650 130224 248558 TRUE FALSE 293279.9143 109817.6571 136428.7143 122634.8646 136225.4944 90954.4405 161736.9485 234790.568 141550.6481 240447.5728 1.219724994 0.456721837 0.567394849 0.510027459 0.566549676 0.378271402 0.672649537 0.976473022 0.588696515 1 17.87536284 -8.404166342 0.863205447 0.965832998 0.606962148 0.136331825 0.242957518 1.076500245 1.780862831 0.229096315 0.082843141 3.94E-09 8.404166342 -0.35887085 LDEEEEDNEGGEWER ddPTM_A459_MK2206_30min_R2 1 LDEEEEDNEGGEWER 15 0 Q99613-2;Q99613 Q99613-2 EIF3C Eukaryotic translation initiation factor 3 subunit C 0 187.57 3.44E-13 0 7695.4 7149.4 7692 10728 9813.4 8538.3 10140 7434.6 7976.8 9621.6 FALSE TRUE 8284.565741 6794.371192 7948.447441 9851.488083 9428.076608 8863.23099 8808.60582 8406.327747 8670.607645 9307.64798 0.89008155 0.729977241 0.853969495 1.05842938 1.012938675 0.952252493 0.946383645 0.903163481 0.931557324 1 13.18420093 -5.573477942 7.544222183 0.96746685 0.805486188 0.605970709 0.055116756 0.14140255 17.77175409 0.015499398 0.027064543 2.67E-06 5.573477942 -0.161980661 LDEGT(ph)PPEPK ddPTM_A459_MK2206_30min_R1 6 LDEGTPPEPK 10 0 H0YMT1;A0A1B0GVU7;Q9Y4G6;H0YN01 H0YMT1;H0YN01 TLN2 Talin-2 1 LDEGT(1)PPEPK;LDEGT(1)PPEPK;LDEGT(1)PPEPK;LDEGT(1)PPEPK;LDEGT(1)PPEPK;LDEGT(1)PPEPK 158.34 0.0011157 225538000 41296.1 46050.2 47865.2 36750.7 37322.9 31542 45505.8 42970.4 44532 44182.1 TRUE FALSE 37783.64984 43052.32361 44616.24358 39581.24528 35836.24986 33327.88078 42470.19111 42594.71432 49161.26076 49655.71211 0.760912456 0.867016538 0.898511806 0.797113637 0.72169441 0.671179193 0.855293164 0.857800896 0.990042407 1 15.59967207 -8.106356033 1.904315229 1.00480839 0.793816978 0.60562395 0.063848608 0.271319751 1.752015701 0.064398688 0.020151204 7.83E-09 8.106356033 -0.210991413 LDEGT(ph)PPEPK ddPTM_A459_MK2206_30min_R2 1 LDEGTPPEPK 10 0 H0YMT1;A0A1B0GVU7;Q9Y4G6;H0YN01 H0YMT1;H0YN01 TLN2 Talin-2 1 LDEGT(1)PPEPK 127.52 0.0076549 29551000 320010 329450 313000 309870 275800 241950 339390 258930 254290 290120 TRUE FALSE 344510.2116 313089.9921 323435.2638 284552.6298 264970.7062 251157.5768 294827.6853 292773.04 276407.6845 280653.4082 1.227529051 1.115575236 1.152436615 1.01389337 0.94412075 0.894903 1.050504561 1.043183626 0.984872004 1 18.09843005 -5.784925159 3.687577261 0.986261364 1.164053393 0.72951918 0.049101191 0.125678329 3.626151133 0.015161561 0.025153314 1.64E-06 5.784925159 0.17779203 LDFIESDS(ph)PCSSEALSK ddPTM_A459_MK2206_30min_R1 2 LDFIESDSPCSSEALSK 17 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 LDFIESDS(0.762)PCS(0.216)S(0.022)EALSK;LDFIESDS(0.972)PCS(0.024)S(0.004)EALSK 237.06 2.10E-22 9746100 3003.38 3071.19 3677.7 2346.75 3271.4 2679.19 3499.4 2901.12 2950.2 3322.9 TRUE FALSE 2747.92676 2871.254973 3428.067971 2527.497092 3141.093211 2830.883422 3265.961411 2875.755814 3256.883847 3734.565939 0.735808874 0.768832314 0.917929427 0.676784701 0.841086558 0.758022075 0.874522358 0.770037499 0.87209167 1 11.86672486 -14.52286463 0.186257634 1.859667201 0.762914837 0.478318005 0.066454303 116.2917299 1.127974878 36.84464282 0.18014955 3.00E-15 14.52286463 -1.096752363 LDFLPEMMVDHCSLNSS(ph)PVSK ddPTM_A459_MK2206_30min_R1 1 LDFLPEMMVDHCSLNSSPVSK 21 0 F5H3J7;F5H0D8;E9PKU1;Q92879-4;G5EA30 F5H3J7 CELF1 1 LDFLPEMMVDHCS(0.008)LNS(0.202)S(0.781)PVS(0.009)K 117.4 5.02E-05 32546000 4726.3 1550.9 2081.2 1582.3 6279.3 5599.3 5291.5 3506.5 2002 1682.4 TRUE FALSE 4324.303366 1449.936128 1939.933943 1704.16902 6029.182184 5916.327527 4938.51369 3475.84304 2210.115064 1890.828413 2.28698878 0.766825862 1.025970378 0.901281686 3.188645856 3.128960558 2.611825407 1.838264654 1.168860722 1 10.88480273 -6.238009402 24.66956562 2.269436226 1.195428237 0.234947544 0.787403713 901.3382315 949024.0735 0.241989399 0.312210514 5.78E-07 6.238009402 -1.074007989 LDGLVET(ph)PTGYIESLPR ddPTM_A459_MK2206_30min_R1 6 LDGLVETPTGYIESLPR 17 0 P55209;F8W020;P55209-2;P55209-3;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8VUX1;F8VXI6;F8W118;F8VRJ2 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 1 LDGLVET(0.944)PT(0.056)GYIESLPR;LDGLVET(0.968)PT(0.031)GYIES(0.001)LPR;LDGLVET(0.746)PT(0.186)GYIES(0.068)LPR;LDGLVET(0.991)PT(0.009)GYIESLPR;LDGLVET(0.413)PT(0.262)GYIES(0.325)LPR;LDGLVET(0.992)PT(0.008)GYIESLPR 263.15 4.15E-40 267988800 17626.6 18396.4 17230.1 14928.21 18560.6 16019.7 18125.7 16894.2 14660.9 13256.9 TRUE FALSE 16127.36511 17198.79102 16060.56882 16077.98332 17821.292 16926.72157 16916.56763 16746.49579 16184.95302 14899.26486 1.082426903 1.15433823 1.077943709 1.079112525 1.19611888 1.136077634 1.135396128 1.123981348 1.086292054 1 13.86295353 -8.668824206 2.229231694 1.000105024 1.124593877 0.531243164 0.035062688 0.451250473 4.473247807 0.03445142 0.009430759 2.14E-09 8.668824206 0.124488852 LDGLVET(ph)PTGYIESLPR ddPTM_A459_MK2206_30min_R2 5 LDGLVETPTGYIESLPR 17 0 P55209;F8W020;P55209-2;P55209-3;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8VUX1;F8VXI6;F8W118;F8VRJ2 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 1 LDGLVET(0.979)PT(0.02)GYIES(0.001)LPR;LDGLVET(0.877)PT(0.05)GY(0.001)IES(0.072)LPR;LDGLVET(0.857)PT(0.139)GY(0.001)IES(0.003)LPR;LDGLVET(0.852)PT(0.147)GYIES(0.001)LPR;LDGLVET(0.921)PT(0.079)GYIESLPR 174.68 4.88E-07 469682000 255259 318122.1 280213.48 310606.49 334965.04 344875.42 344412.61 256218 290738 289080.98 TRUE FALSE 274801.8253 302324.6191 289555.6576 285228.9462 321812.6295 357999.8958 299190.8206 289706.5723 316025.8657 279648.2913 0.982669424 1.081088741 1.035427952 1.019955977 1.150776313 1.280179093 1.069882527 1.035967611 1.130083307 1 18.09325399 -6.254070342 24.54025146 1.11933479 1.033853065 0.216938125 0.074604276 720.4317769 2399169.184 0.023257828 0.029402959 5.57E-07 6.254070342 -0.085481725 LDGLVETPTGYIES(ph)LPR ddPTM_A459_MK2206_30min_R1 2 LDGLVETPTGYIESLPR 17 0 P55209;F8W020;P55209-2;P55209-3;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8VUX1;F8VXI6;F8W118;F8VRJ2 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 1 LDGLVETPT(0.001)GYIES(0.999)LPR;LDGLVETPTGYIES(1)LPR 253.34 7.71E-31 46962400 4274.3 4230.3 4252.8 3796.9 4405.2 4471.5 4709.1 4235.3 3442.8 3217.2 TRUE FALSE 3910.74834 3954.906701 3964.131785 4089.337896 4229.731556 4724.672466 4394.964531 4198.271219 3800.69138 3615.771025 1.081580751 1.09379346 1.096344807 1.130972583 1.169800722 1.306684642 1.215498576 1.161099857 1.051142717 1 11.8200876 -5.960660128 2.763628734 1.1691888 1.090267311 0.074903963 0.079883933 0.534365569 8.294097046 0.024924845 0.038395161 1.09E-06 5.960660128 -0.078921489 LDGLVETPTGYIES(ph)LPR ddPTM_A459_MK2206_30min_R2 4 LDGLVETPTGYIESLPR 17 0 P55209;F8W020;P55209-2;P55209-3;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8VUX1;F8VXI6;F8W118;F8VRJ2 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 1 LDGLVETPTGYIES(1)LPR;LDGLVET(0.064)PT(0.004)GYIES(0.931)LPR;LDGLVET(0.001)PT(0.034)GYIES(0.965)LPR;LDGLVET(0.002)PT(0.007)GYIES(0.991)LPR 165.66 1.60E-06 17359700 51328 69125 61133 65452 64735 56037 61169 56042.9 58020 57180 TRUE FALSE 55257.71114 65692.35302 63171.14371 60104.36223 62193.17863 58169.5273 53137.43682 63367.89945 63066.47472 55314.22128 0.99897838 1.187621402 1.142041635 1.086598723 1.124361461 1.051619745 0.960646929 1.14559869 1.140149373 1 15.75536282 -6.76171699 24.99999313 1.062518111 1.113059257 0.106350942 0.068975258 18.07060429 1627220.96 0.024070578 0.022551553 1.73E-07 6.76171699 0.050541146 LDGSLETTNEILDS(ph)ASHDCPLVTQTYGAAAGK ddPTM_A459_MK2206_30min_R2 2 LDGSLETTNEILDSASHDCPLVTQTYGAAAGK 32 0 Q9Y4P8-4;Q9Y4P8;Q9Y4P8-3;Q9Y4P8-2;Q9Y4P8-5;Q9Y4P8-6 Q9Y4P8-4 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 1 LDGSLETTNEILDS(0.5)AS(0.5)HDCPLVTQTYGAAAGK;LDGSLETT(0.002)NEILDS(0.497)AS(0.497)HDCPLVT(0.003)QTYGAAAGK 98.225 5.53E-09 6484200 22409 32492 24738 36452 30643 23528 25328 19376.6 21525.1 17254.2 TRUE FALSE 24124.65027 30878.49453 25562.75257 33473.755 29439.80185 24423.37453 22002.40318 21909.18815 23397.31429 16691.19687 1.44535173 1.849986839 1.531511058 2.00547362 1.763792141 1.463248844 1.318204042 1.31261936 1.401775707 1 14.02679979 -6.972241587 2.81644116 1.285675559 1.731613073 0.600823851 0.176438998 0.192295941 3.102669271 0.068529228 0.05620172 1.07E-07 6.972241587 0.445937514 LDHEGVT(ph)SPK ddPTM_A459_MK2206_30min_R2 1 LDHEGVTSPK 10 0 H9KVB4;O15417;H7BXS9;F8WBW8;Q9P281 H9KVB4;F8WBW8 TNRC18;BAHCC1 Trinucleotide repeat-containing gene 18 protein;BAH and coiled-coil domain-containing protein 1 1 LDHEGVT(0.875)S(0.125)PK 104.07 0.02029 0 50996 44609 45847 35380 47513 32001 50140 35847 26040 50162 TRUE FALSE 54900.29297 42393.78193 47375.5161 32489.34082 45647.40089 33218.82048 43556.55777 40532.32598 28304.91213 48525.21805 1.131376533 0.873644337 0.976307124 0.669535185 0.9406944 0.684568186 0.897606637 0.835283748 0.583303142 1 15.56644708 -1.52287942 0.785932953 0.80207796 73.7126483 0.338084174 0.130959906 495.5905509 1.83425738 0.04413348 64242.20294 0.029999953 1.52287942 72.91057034 LDHEGVTS(ph)PK ddPTM_A459_MK2206_30min_R1 2 LDHEGVTSPK 10 0 H9KVB4;O15417;H7BXS9;F8WBW8;Q9P281 H9KVB4;F8WBW8 TNRC18;BAHCC1 Trinucleotide repeat-containing gene 18 protein;BAH and coiled-coil domain-containing protein 1 1 LDHEGVT(0.121)S(0.879)PK;LDHEGVT(0.066)S(0.934)PK 157.68 0.00048808 10134800 10536.8 12375.5 12245.4 10283 7689.3 7032.1 9370.2 9030.5 10676.7 9016.7 TRUE FALSE 9640.589829 11569.8527 11414.21637 11074.99844 7383.018899 7430.251425 8745.131055 8951.547291 11786.58117 10133.75687 0.951334234 1.14171406 1.126355853 1.092881799 0.72855694 0.73321785 0.862970285 0.883339457 1.163100845 1 13.3068815 -6.22990277 23.8327065 0.879654183 1.086066359 0.32614418 0.127401004 430.4738133 325315.0903 0.039296574 0.05072512 5.89E-07 6.22990277 0.206412175 LDHEGVTS(ph)PK ddPTM_A459_MK2206_30min_R2 1 LDHEGVTSPK 10 0 H9KVB4;O15417;H7BXS9;F8WBW8;Q9P281 H9KVB4;F8WBW8 TNRC18;BAHCC1 Trinucleotide repeat-containing gene 18 protein;BAH and coiled-coil domain-containing protein 1 1 LDHEGVT(0.229)S(0.771)PK 105.65 0.0081893 12043000 159710 144330 144690 132570 125100 103220 167350 136460 104080 161430 TRUE FALSE 171937.5204 137162.7821 149513.8924 121738.6069 120187.9454 107148.1094 145376.744 154295.7905 113132.6903 156162.5523 1.101016331 0.878333378 0.957424749 0.779563379 0.769633588 0.686131904 0.930932172 0.988046034 0.72445467 1 17.25268901 -3.449674828 1.091089462 0.841237859 4.920945708 0.322559696 0.106534628 32.07873775 2.958925681 0.033282977 281.8745544 0.000355079 3.449674828 4.079707849 LDHKFDLMYAK ddPTM_A459_MK2206_30min_R1 1 LDHKFDLMYAK 11 1 Q9BQE3;F5H5D3;Q9NY65;Q9NY65-2;C9J2C0;V9GZ17;P68363;P68363-2;P68366-2;P68366;A6NHL2-2;A6NHL2 Q9BQE3;P68363;P68366-2;A6NHL2-2 TUBA1C;TUBA8;TUBA1B;TUBA4A;TUBAL3 Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha chain-like 3 0 80.763 0.03438 16009000 13865 14569 15142 14975 15064 14482 12654 14080 9776.5 7491.2 FALSE TRUE 12685.70894 13620.55545 14114.20323 16128.37709 14463.96898 15301.95832 11809.87475 13956.90004 10792.80216 8419.266412 1.506747539 1.617784114 1.676417224 1.915651116 1.717960719 1.817493066 1.402720162 1.657733508 1.281917169 1 13.03947882 -8.474757327 0.991056415 0.996584808 1.699894541 0.722248507 0.135669412 0.30012052 0.650161952 0.132467356 0.044557081 3.35E-09 8.474757327 0.703309733 LDHLAEK ddPTM_A459_MK2206_30min_R2 2 LDHLAEK 7 0 O43707;O43707-2;P12814-4;P12814-3;P12814;P12814-2;H9KV75 O43707;P12814-4 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 0 ; 95.741 0.033151 75356000 646440 727630 696310 770960 761030 575730 742340 658070 631280 670460 FALSE TRUE 695931.9434 691496.9523 719524.6279 707970.1018 731148.1383 597639.8086 644869.8663 744082.0085 686187.5933 648582.9451 1.073003767 1.066165797 1.109379507 1.091564475 1.127300901 0.921454708 0.99427509 1.147242637 1.057979706 1 19.30693156 LDIDPETITWQR ddPTM_A459_MK2206_30min_R2 1 LDIDPETITWQR 12 0 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586;A0A494C1T2 V9GZ78 MTHFD1 "C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed" 0 123.96 0.043907 1345900 11565 13191 10067 11924 14613 10922 13494 8061.3 11555 9723.4 FALSE TRUE 12450.42529 12535.95412 10402.62876 10949.77106 14039.2202 11337.64436 11722.22159 9114.939589 12560.03301 9406.126254 1.323650667 1.332743553 1.105941859 1.164110577 1.492561318 1.205346819 1.246232644 0.969042871 1.335303469 1 13.19938498 -14.52287874 0.12128335 0.188384126 1.353586444 0.246512566 0.134305068 224.6311572 1.753710576 44.14533979 1.273198436 3.00E-15 14.52287874 1.165202318 LDIDS(ph)PPITAR ddPTM_A459_MK2206_30min_R1 8 LDIDSPPITAR 11 0 P14618;B4DNK4;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;H3BN34;H3BQZ3;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 LDIDS(1)PPITAR;LDIDS(0.999)PPIT(0.001)AR;LDIDS(0.993)PPIT(0.007)AR;LDIDS(1)PPITAR;LDIDS(1)PPITAR;LDIDS(0.997)PPIT(0.003)AR;LDIDS(1)PPITAR;LDIDS(0.999)PPIT(0.001)AR 169.58 0.00041306 103109300 57847.4 60297.43 61522.46 50703.16 62024.66 53227.28 59964.62 56431.68 51004.17 48459.99 TRUE FALSE 52927.17486 56372.05635 57346.48683 54608.32617 59554.08645 56240.9626 55964.48961 55938.30377 56306.23599 54463.57942 0.971790239 1.035041342 1.052932757 1.00265768 1.093466259 1.032634344 1.027558053 1.027077257 1.033832822 1 15.73300418 -4.761733499 7.871693167 1.036051909 0.97094458 0.357646673 0.024830638 0.099112711 51.5721221 0.00590863 0.034507346 1.73E-05 4.761733499 -0.065107329 LDIDS(ph)PPITAR ddPTM_A459_MK2206_30min_R2 16 LDIDSPPITAR 11 0 P14618;B4DNK4;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;H3BN34;H3BQZ3;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 LDIDS(1)PPITAR;LDIDS(0.999)PPIT(0.001)AR;LDIDS(1)PPITAR;LDIDS(1)PPITAR;LDIDS(0.996)PPIT(0.004)AR;LDIDS(1)PPITAR;LDIDS(1)PPITAR;LDIDS(0.975)PPIT(0.025)AR;LDIDS(1)PPITAR;LDIDS(1)PPITAR;LDIDS(0.995)PPIT(0.005)AR;LDIDS(1)PPITAR;LDIDS(1)PPITAR;LDIDS(0.999)PPIT(0.001)AR;LDIDS(1)PPITAR;LDIDS(0.993)PPIT(0.007)AR 195.72 5.99E-08 36221200 666361.3 810631.2 756272.2 832587.5 806931.5 756592.8 805800.7 647200.2 715668.4 759387.1 TRUE FALSE 717378.4335 770376.4334 781485.9377 764562.4379 775247.3148 785385.4692 699998.1001 731791.4883 777915.9438 734608.3611 0.976545424 1.048689988 1.063813018 1.040775573 1.055320571 1.069121332 0.952886105 0.996165477 1.058953294 1 19.48661579 -7.239392687 24.99102208 1.001681663 1.044154401 0.254046155 0.033810884 1107.802055 1255751.092 0.013095576 0.010134605 5.76E-08 7.239392687 0.042472739 LDIDSPPIT(ph)AR ddPTM_A459_MK2206_30min_R1 2 LDIDSPPITAR 11 0 P14618;B4DNK4;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;H3BN34;H3BQZ3;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 LDIDSPPIT(1)AR;LDIDSPPIT(1)AR 145.81 0.0016259 7994100 4181.9 4108.2 3680.6 3776.3 4599.5 4309.6 3919.6 3337.5 3791.7 2720 TRUE FALSE 3826.207445 3840.755433 3430.771127 4067.15128 4416.292175 4553.605828 3658.130636 3308.320589 4185.860784 3056.974135 1.25163226 1.25639121 1.122276792 1.330450014 1.444661283 1.489579443 1.19665083 1.082220668 1.369282368 1 11.57788863 -11.09794763 6.569087642 0.999545859 1.280931319 0.318347724 0.124024427 0.000898709 5.81E-05 0.130830041 0.031681232 7.98E-12 11.09794763 0.28138546 LDIDSPPIT(ph)AR ddPTM_A459_MK2206_30min_R2 3 LDIDSPPITAR 11 0 P14618;B4DNK4;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;H3BN34;H3BQZ3;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 LDIDS(0.002)PPIT(0.998)AR;LDIDS(0.286)PPIT(0.714)AR;LDIDS(0.006)PPIT(0.994)AR 120.84 0.010792 6719000 47792.5 63380.2 51876 56604.7 50742.9 53828.5 63673.4 49900.8 43468 51410.9 TRUE FALSE 51451.53055 60232.83143 53605.51995 51979.91494 48750.47878 55876.98129 55313.00609 56423.0059 47248.76807 49733.36654 1.03454751 1.211115105 1.07785826 1.045171854 0.980236854 1.123531045 1.112191069 1.134510085 0.950041619 1 15.60192647 -14.52287875 0.0826528 0.710645549 1.160932229 0.139139201 0.070605257 517.1239721 3.000600185 26.36818954 2.26740147 3.00E-15 14.52287875 0.45028668 LDIDSPPITAR ddPTM_A459_MK2206_30min_R1 1 LDIDSPPITAR 11 0 P14618;B4DNK4;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;H3BN34;H3BQZ3;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 162.64 0.0086963 17820000 2996.4 2688.2 2909.3 2627.4 3131.6 2489 2841.6 3197.7 2650.5 2241.5 FALSE TRUE 2741.540445 2513.197691 2711.824822 2829.762803 3006.861741 2629.925029 2652.042049 3169.742846 2926.02896 2519.193942 1.088260971 0.997619774 1.076465284 1.123281045 1.193580887 1.043954967 1.05273437 1.258236928 1.161494123 1 11.29874648 -5.617233846 3.704077322 1.126964366 1.041576722 0.140041769 0.074572391 0.389830044 10.25867016 0.02114924 0.039343295 2.41E-06 5.617233846 -0.085387644 LDIDSPPITAR ddPTM_A459_MK2206_30min_R2 2 LDIDSPPITAR 11 0 P14618;B4DNK4;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;H3BN34;H3BQZ3;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 180.09 0.00068902 26839000 31440 40273 29944 35952 37306 37450 38386 29781 33855 35829 FALSE TRUE 33847.07057 38273.10138 30942.31801 33014.6066 35841.17899 38875.18599 33345.87209 33673.47895 36799.6467 34659.90266 0.976548345 1.104247226 0.892741053 0.952530274 1.034081929 1.121618441 0.962087875 0.971539917 1.061735431 1 15.08097998 LDIPTGTT(ph)PQR ddPTM_A459_MK2206_30min_R1 2 LDIPTGTTPQR 11 0 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 LDIPT(0.003)GT(0.101)T(0.896)PQR;LDIPT(0.001)GT(0.005)T(0.994)PQR 101.71 0.035084 27627000 10577.2 10093.6 9832.6 6879.9 8942.8 8319.5 12027.3 8364.9 12786.6 14092.1 TRUE FALSE 9677.553597 9436.504805 9165.190507 7409.79109 8586.589339 8790.5429 11224.98076 8291.766561 14115.81283 15837.93574 0.611036296 0.595816586 0.578685926 0.467850812 0.542153313 0.555030848 0.708740138 0.523538338 0.891265949 1 13.95109669 -8.376419113 3.714551535 0.995232766 0.572923785 0.85911454 0.06092351 0.079629717 1.851677887 0.060356256 0.016048036 4.20E-09 8.376419113 -0.422308981 LDIPTGTT(ph)PQR ddPTM_A459_MK2206_30min_R2 3 LDIPTGTTPQR 11 0 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 LDIPT(0.011)GT(0.037)T(0.952)PQR;LDIPT(0.014)GT(0.05)T(0.937)PQR;LDIPT(0.063)GT(0.234)T(0.703)PQR 113.95 0.015916 61987600 411150 314851 321796 371865 286324 291278 408433 316513 243970 366195 TRUE FALSE 442627.9601 299215.9572 332524.518 341482.44 275081.4811 302362.7884 354805.2565 357882.3359 265190.0696 354246.0871 1.24949287 0.844655645 0.938682261 0.963969546 0.77652652 0.853538823 1.001578477 1.010264753 0.74860409 1 18.43439239 -4.755286845 24.95693485 0.904938141 1.249493449 0.568927864 0.090165937 148.6411595 602883.374 0.022283139 0.200564082 1.76E-05 4.755286845 0.344555308 LDIS(ph)QDDSEITQMEHNLASR ddPTM_A459_MK2206_30min_R1 1 LDISQDDSEITQMEHNLASR 20 0 D6RCC7;Q9P2D6-3;Q9P2D6-2;Q9P2D6-4;Q9P2D6 D6RCC7 FAM135A Protein FAM135A 1 LDIS(0.998)QDDS(0.002)EITQMEHNLASR 161.48 1.88E-08 0 135.13 0 211.45 179.45 404.56 191.67 197.64 257.47 212.14 206.6 TRUE FALSE 123.6364839 0 197.0973631 193.2712701 388.4455185 202.5221898 184.4557962 255.2189669 234.1927122 232.1951678 0.532467945 0 0.848843518 0.8323656 1.672926798 0.872206738 0.794399806 1.099157099 1.008602868 1 7.859194138 -5.446765346 3.524721756 1.046290005 0.269154038 0.569682284 0.26334184 0.165145069 3.903241324 0.071972817 0.160099335 3.57E-06 5.446765346 -0.777135967 LDLFSCLLR ddPTM_A459_MK2206_30min_R1 1 LDLFSCLLR 9 0 Q76B58-2;Q9C0B6-2;Q76B58;Q9C0B6 Q76B58-2 BRINP3;BRINP2 BMP/retinoic acid-inducible neural-specific protein 3;BMP/retinoic acid-inducible neural-specific protein 2 0 114.89 0.011717 2580900 1735.2 1782.2 1735.6 1442.8 1738.1 1669.1 1820.4 1749.8 1473.1 1574.4 FALSE TRUE 1587.612128 1666.178456 1617.792308 1553.924706 1668.867797 1763.603 1698.964438 1734.501683 1626.234017 1769.448558 0.897235537 0.941637127 0.9142918 0.878197164 0.943157002 0.996696395 0.960166053 0.98024985 0.919062614 1 10.7890841 -6.518842007 22.91480489 0.969377463 0.91071049 0.572673898 0.025742339 44.08298075 250245.5871 0.008189855 0.008398294 3.03E-07 6.518842007 -0.058666974 LDLLGNLPGS(ph)K ddPTM_A459_MK2206_30min_R1 1 LDLLGNLPGSK 11 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLLGNLPGS(1)K 115.1 0.006275 8028500 4677.4 5803.1 3958 4775.8 3489.3 3405.4 2913.6 2493.1 3915.7 2949 TRUE FALSE 4279.562568 5425.317135 3689.341988 5143.632944 3350.313792 3598.210805 2719.23906 2471.30309 4322.751027 3314.344384 1.291224469 1.636920159 1.113143826 1.551930743 1.010852647 1.085647835 0.820445538 0.745638595 1.304255239 1 11.6945078 -6.333075705 6.730592227 0.975237084 1.394343739 0.511375788 0.192894862 0.197474174 15.59261805 0.058473367 0.066488562 4.64E-07 6.333075705 0.419106655 LDLLGNLPGS(ph)K ddPTM_A459_MK2206_30min_R2 2 LDLLGNLPGSK 11 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLLGNLPGS(1)K;LDLLGNLPGS(1)K 115.82 0.006068 3117500 81452 70461 57968 67334 49406 43933 70434 49688 27398 55119 TRUE FALSE 87688.02775 66962.0092 59900.62419 61832.59681 47466.07219 45604.9011 61185.93119 56182.3922 29781.02852 53320.47154 1.644547117 1.255840529 1.123407623 1.159640847 0.890203534 0.855298158 1.147512942 1.053673956 0.558528979 1 15.70240192 -1.522878749 0.504697638 0.91349448 24.56120266 0.673604767 0.154012014 66.88539648 0.701505749 0.084706903 1680.849008 0.03 1.522878749 23.64770818 LDLLGNLPGS(ph)KR ddPTM_A459_MK2206_30min_R2 1 LDLLGNLPGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLLGNLPGS(1)KR 66.059 0.039244 7914700 61887 60080 43515 58572 48568 42102 57621 44523 28927 47491 TRUE FALSE 66625.1163 57096.51456 44965.76838 53786.48024 46660.97629 43704.22111 50055.29348 50342.30897 31443.01817 45941.37256 1.450220413 1.242812554 0.978764148 1.170763459 1.015663523 0.95130421 1.089547192 1.095794622 0.684416168 1 15.48750634 -1.522878746 0.548824208 0.973751343 22.26453093 0.603025132 0.120295088 93.31891804 0.857911718 0.058920781 2341.019065 0.03 1.522878746 21.29077958 LDLTGPHFESSILS(ph)PCEDVTLTK ddPTM_A459_MK2206_30min_R2 1 LDLTGPHFESSILSPCEDVTLTK 23 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 LDLTGPHFES(0.028)S(0.11)ILS(0.855)PCEDVT(0.004)LT(0.002)K 62.57 0.0048348 3457800 8300.2 7260.9 7350.3 6417 6373.9 5892.7 6634.2 3668.2 5003 5190.4 TRUE FALSE 8935.669694 6900.334264 7595.355333 5892.710573 6123.62866 6116.950828 5763.121571 4147.646335 5438.151897 5021.037673 1.779646017 1.374284503 1.512706303 1.173604135 1.219594247 1.218264276 1.147794927 0.826053618 1.083073311 1 12.29376983 -1.522878745 0.265830546 0.940832442 6.454702584 0.805897937 0.112373313 21.06715866 0.292833247 0.132173778 53.01422741 0.03 1.522878745 5.513870142 LDNLVAILDINR ddPTM_A459_MK2206_30min_R1 2 LDNLVAILDINR 12 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 0 ; 148.13 0.0084646 30768000 6105.9 5978.3 5249.7 5476.8 5028.9 5442.5 4369.2 4599.3 4355.5 4264.8 FALSE TRUE 5586.561142 5589.111583 4893.364991 5898.624085 4828.588264 5750.649647 4077.73864 4559.088805 4808.269811 4793.155622 1.165528846 1.166060947 1.020906763 1.230634795 1.007392341 1.199762766 0.850741967 0.951166448 1.003153286 1 12.22676007 -7.256820343 24.99976827 0.947195962 1.127084283 0.565724956 0.077356645 284.2485722 1538453.167 0.028740857 0.021487564 5.54E-08 7.256820343 0.179888322 LDNS(ph)PNMNITQPSK ddPTM_A459_MK2206_30min_R1 2 LDNSPNMNITQPSK 14 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 LDNS(0.501)PNMNIT(0.498)QPS(0.001)K;LDNS(1)PNMNITQPSK 132.25 0.00082299 6582900 7163 5852.4 6103.4 5239.4 5649.9 5308.1 5580.7 6051.2 5545.5 5474.7 TRUE FALSE 6553.749236 5471.407696 5689.118213 5642.939496 5424.852519 5608.640035 5208.421686 5998.294996 6121.97457 6152.947168 1.065139852 0.889233655 0.924616782 0.917111645 0.881667333 0.911537168 0.846492184 0.97486535 0.994966217 1 12.58706189 -7.979601534 24.66155367 0.99329403 0.916175694 0.268517155 0.053948329 243.4799423 294364.7393 0.028904868 0.01388313 1.05E-08 7.979601534 -0.077118336 LDNS(ph)PNMNITQPSK ddPTM_A459_MK2206_30min_R2 5 LDNSPNMNITQPSK 14 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 LDNS(0.74)PNMNIT(0.26)QPSK;LDNS(1)PNMNITQPSK;LDNS(0.827)PNMNIT(0.033)QPS(0.14)K;LDNS(0.998)PNMNIT(0.002)QPSK;LDNS(0.998)PNMNIT(0.002)QPSK 211.06 1.82E-30 8756200 124871 129614 116545 128042 130533 109025 133751 103527 92412 128769 TRUE FALSE 134431.2198 123177.5572 120430.5521 117580.559 125407.6185 113174.0228 116189.333 117058.3344 100449.8287 124567.2781 1.079185657 0.988843612 0.966791231 0.943912084 1.006746077 0.908537334 0.932743613 0.939719774 0.806390171 1 16.92656562 -1.522878745 0.434253074 0.918319956 4.006146043 0.438822901 0.051056793 76.87261265 0.957844382 0.03245941 208.2869027 0.03 1.522878745 3.087826087 LDNSPNMNIT(ph)QPSK ddPTM_A459_MK2206_30min_R1 1 LDNSPNMNITQPSK 14 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 LDNS(0.031)PNMNIT(0.969)QPSK 175.66 0.00015999 6136300 4330.5 4334.5 4812.2 3776.8 4190.2 4137.7 4135.3 4089.5 3739.5 3523.5 TRUE FALSE 3962.168235 4052.323262 4485.561272 4067.68979 4023.295461 4371.972998 3859.441682 4053.745933 4128.234407 3960.017781 1.000543041 1.02330936 1.132712407 1.027189779 1.01597914 1.104028628 0.974602109 1.023668619 1.042478755 1 11.95129119 -7.276958281 24.88225179 1.012159763 1.050476266 0.185149708 0.041478251 1545.884135 2478585.303 0.017625683 0.01192839 5.28E-08 7.276958281 0.038316503 LDNSPNMNIT(ph)QPSK ddPTM_A459_MK2206_30min_R2 1 LDNSPNMNITQPSK 14 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 LDNSPNMNIT(0.997)QPS(0.003)K 169.21 0.00042568 15035000 46293 47097 47358 49858 44011 42875 51684 30305 40908 43836 TRUE FALSE 49837.22767 44758.23147 48936.89208 45784.44191 42282.907 44506.63817 44897.82872 34265.96755 44466.1039 42405.63491 1.175250124 1.055478395 1.154018615 1.079678255 0.997105859 1.049545379 1.058770345 0.808052223 1.048589509 1 15.37196836 -6.478811296 0.752361465 0.960085853 1.134342419 0.411357695 0.073106023 0.670956482 0.843767044 0.045485666 0.061390552 3.32E-07 6.478811296 0.174256566 LDNT(ph)PASPPRSPAEPNDIPIAK ddPTM_A459_MK2206_30min_R1 1 LDNTPASPPRSPAEPNDIPIAK 22 1 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2;H0Y8P9 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 LDNT(0.648)PAS(0.342)PPRS(0.01)PAEPNDIPIAK 78.645 0.0019501 37063000 2002.7 2265.6 2368.9 2498.8 2784.8 2819.2 4228.1 3612.1 4107 4083.9 TRUE FALSE 1832.359848 2118.109028 2208.105668 2691.258009 2673.875519 2978.820668 3946.051164 3580.519791 4533.937347 4589.844364 0.399220475 0.46147731 0.481085085 0.586350603 0.582563439 0.649002544 0.859735287 0.780096122 0.987819409 1 12.16422952 -7.084527111 0.495570644 1.020601425 0.39692276 0.945934268 0.047926406 0.200121188 0.105896679 0.043924145 0.045423898 8.23E-08 7.084527111 -0.623678664 down LDNT(ph)PASPPRSPAEPNDIPIAK ddPTM_A459_MK2206_30min_R2 1 LDNTPASPPRSPAEPNDIPIAK 22 1 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2;H0Y8P9 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 LDNT(0.637)PAS(0.326)PPRS(0.038)PAEPNDIPIAK 72.899 0.0037269 32864000 34382 36084 36280 55441 48672 45975 74605 59809 58333 68365 TRUE FALSE 37014.31236 34292.12103 37489.55709 50911.29295 46760.89272 47724.61084 64809.27388 67626.24166 63406.6989 66134.25565 0.559684418 0.518522824 0.566870478 0.769817282 0.70706009 0.721632237 0.979965273 1.022559958 0.958757278 1 16.01311012 -6.7269251 0.640033697 1.032951775 0.522413116 0.886896049 0.062948031 0.256835346 0.23126007 0.052313655 0.058542301 1.88E-07 6.7269251 -0.510538659 LDNTPAS(ph)PPRS(ph)PAEPNDIPIAK ddPTM_A459_MK2206_30min_R1 1 LDNTPASPPRSPAEPNDIPIAK 22 1 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2;H0Y8P9 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 2 LDNT(0.379)PAS(0.804)PPRS(0.818)PAEPNDIPIAK 58.914 0.036004 2210100 1044.4 1511.6 1128.7 946.9 965.26 987.14 1188.4 906.47 1135.6 1451.6 TRUE FALSE 955.5682956 1413.194565 1052.086989 1019.830402 926.8116502 1043.031014 1109.124004 898.5448284 1253.649684 1631.435167 0.585722507 0.866227843 0.644884339 0.62511243 0.568095913 0.639333413 0.67984559 0.55076956 0.768433652 1 10.67192594 -8.569970849 6.201100674 0.999985617 0.650431145 0.630746358 0.083154968 0.266801775 33.50312039 0.081313282 0.021065732 2.69E-09 8.569970849 -0.349554471 LDNTPAS(ph)PPRS(ph)PAEPNDIPIAK ddPTM_A459_MK2206_30min_R2 2 LDNTPASPPRSPAEPNDIPIAK 22 1 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2;H0Y8P9 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 2 LDNT(0.04)PAS(0.96)PPRS(1)PAEPNDIPIAK;LDNT(0.022)PAS(0.978)PPRS(1)PAEPNDIPIAK 88.282 0.00098875 54805000 234150 213956 212700 219200 188688 174522 204665 173989 143823 204321 TRUE FALSE 252076.704 203331.2562 219791.3118 201290.6588 181279.161 181163.557 177792.2397 196729.9597 156332.4646 197654.0225 1.275343152 1.028723087 1.112000196 1.018399 0.917153917 0.916569037 0.899512377 0.995324847 0.79093996 1 17.59261779 -1.522878745 0.431704261 0.907286824 7.834245841 0.692121189 0.069515814 44.76380235 0.560674063 0.043854917 270.0143131 0.03 1.522878745 6.926959017 LDNTPAS(ph)PPRSPAEPNDIPIAK ddPTM_A459_MK2206_30min_R1 2 LDNTPASPPRSPAEPNDIPIAK 22 1 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2;H0Y8P9 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 LDNT(0.081)PAS(0.471)PPRS(0.449)PAEPNDIPIAK;LDNT(0.345)PAS(0.655)PPRSPAEPNDIPIAK 98.924 8.74E-05 47561700 4000.73 4527.3 5087.8 3660.71 5386.9 6097.5 7664.1 6442.6 7458 8218 TRUE FALSE 3660.446905 4232.571947 4742.454311 3942.658518 5172.328366 6442.735181 7152.841873 6386.273027 8233.285789 9236.107883 0.396319202 0.458263589 0.513468917 0.426874455 0.560011688 0.697559542 0.774443301 0.691446344 0.891423735 1 13.17306931 -7.313505973 0.404409924 1.006734192 0.369572448 0.927177873 0.05240195 0.310184135 0.121449284 0.061016136 0.068435823 4.86E-08 7.313505973 -0.637161743 down LDNTPAS(ph)PPRSPAEPNDIPIAK ddPTM_A459_MK2206_30min_R2 2 LDNTPASPPRSPAEPNDIPIAK 22 1 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2;H0Y8P9 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 LDNT(0.255)PAS(0.737)PPRS(0.008)PAEPNDIPIAK;LDNT(0.455)PAS(0.526)PPRS(0.019)PAEPNDIPIAK 71.148 0.002027 41671000 53344 59472 67542 88367 78044 73507 101157 97396 88664 113774 TRUE FALSE 57428.05765 56518.70696 69793.81657 81147.13343 74979.60042 76304.36039 87874.96439 110125.9916 96375.83445 110061.5637 0.521781226 0.513519026 0.634134336 0.737288575 0.681251455 0.693287991 0.798416463 1.000585381 0.875653872 1 16.74795121 -6.61654254 0.347051232 1.028745971 0.426578654 0.869999227 0.059548328 0.722148594 0.169169836 0.074882523 0.164001829 2.42E-07 6.61654254 -0.602167317 LDNVPHT(ph)PSSYIETLPK ddPTM_A459_MK2206_30min_R1 2 LDNVPHTPSSYIETLPK 17 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHT(0.899)PS(0.091)S(0.01)YIETLPK;LDNVPHT(0.974)PS(0.02)S(0.006)YIETLPK 114.63 0.0022949 85082000 16526.9 14114.5 13136.2 12852.8 15423.1 13179.9 14424.4 13729.2 11069.5 10867.6 TRUE FALSE 15121.20037 13195.64348 12244.55134 13842.72488 14808.76527 13926.13455 13462.17459 13609.16705 12220.21414 12213.96033 1.238025993 1.080373861 1.002504594 1.133352697 1.212445829 1.14018174 1.102195703 1.114230494 1.000512021 1 13.57624344 -8.24304146 3.937826852 0.996144785 1.125717744 0.406046551 0.061828431 0.235271774 8.054233249 0.055568181 0.016937549 5.71E-09 8.24304146 0.129572958 LDNVPHT(ph)PSSYIETLPK ddPTM_A459_MK2206_30min_R2 2 LDNVPHTPSSYIETLPK 17 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHT(0.981)PS(0.016)S(0.004)YIETLPK;LDNVPHT(0.91)PS(0.086)S(0.004)Y(0.001)IETLPK 95.622 0.0085686 29086500 130770 165586 136057 173686 180428 153167 188086 137636 140737 141807 TRUE FALSE 140781.8517 157363.24 140593.0725 159495.2982 173343.4901 158995.8775 163390.0823 155625.4978 152978.0499 137179.8492 1.026257519 1.147130872 1.024881375 1.162672937 1.263622107 1.15903231 1.191064746 1.134463252 1.11516415 1 17.06570905 -4.759730025 24.57768996 1.141557256 1.026257342 0.154987656 0.072478807 64.31472611 924390.0549 0.018224185 0.113296222 1.74E-05 4.759730025 -0.115299914 LDNVPHTPS(ph)SYIETLPK ddPTM_A459_MK2206_30min_R2 3 LDNVPHTPSSYIETLPK 17 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHT(0.113)PS(0.386)S(0.386)Y(0.002)IET(0.113)LPK;LDNVPHT(0.177)PS(0.408)S(0.408)YIET(0.007)LPK;LDNVPHTPS(0.497)S(0.497)Y(0.005)IET(0.001)LPK 150.45 0.00025678 18481400 126037 145426 137768 162419 157349 132875 174200 120767 129034 142117 TRUE FALSE 135686.4896 138204.3563 142361.1164 149148.8481 151170.6876 137931.6512 151327.3307 136551.6616 140257.1441 137479.7339 0.986956301 1.005270758 1.035506196 1.084878795 1.09958525 1.003287156 1.100724641 0.993249388 1.020202324 1 17.06885944 -5.218255243 3.041831508 1.04668736 0.991286232 0.187711142 0.038578786 0.408714281 7.468407666 0.010384487 0.032978932 6.05E-06 5.218255243 -0.055401127 LDNVPHTPSS(ph)YIETLPK ddPTM_A459_MK2206_30min_R1 1 LDNVPHTPSSYIETLPK 17 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHTPS(0.064)S(0.936)YIETLPK 166.49 9.71E-07 17457000 6727.3 6640.1 6807.8 6005.3 6505.2 6022.9 6386.6 6601.3 6220.3 4569.8 TRUE FALSE 6155.107809 6207.828283 6345.705504 6467.829247 6246.084109 6363.911393 5960.561567 6543.58553 6866.922445 5135.941324 1.198438109 1.208703116 1.235548676 1.259326935 1.216151766 1.239093477 1.160558735 1.274077159 1.337032885 1 12.32641301 -10.67610056 5.980092589 0.999997974 1.234713307 0.710767942 0.045255248 1.26E-06 1.78E-07 0.045014907 0.010917624 2.11E-11 10.67610056 0.234715332 LDNVPHTPSS(ph)YIETLPK ddPTM_A459_MK2206_30min_R2 3 LDNVPHTPSSYIETLPK 17 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHTPS(0.041)S(0.959)YIET(0.001)LPK;LDNVPHTPS(0.041)S(0.959)YIETLPK;LDNVPHTPS(0.198)S(0.784)Y(0.016)IET(0.002)LPK 140.73 0.00033283 17046800 136126 146337 128522 140837 135302 112138 146810 113081 115320 125645 TRUE FALSE 146547.9112 139070.1174 132806.8593 129330.1666 129989.3636 116405.4902 127533.6706 127861.075 125350.3251 121545.2139 1.205706967 1.144184233 1.09265396 1.064049849 1.069473321 0.957713483 1.049269375 1.051963058 1.031306138 1 16.89113356 -4.8984971 0.7369108 1.024008748 1.297015133 0.81506295 0.028563311 1.064526618 0.490867041 0.012368813 0.234967263 1.26E-05 4.8984971 0.273006385 LDPAQSAS(ph)RENLLEEQGSIALR ddPTM_A459_MK2206_30min_R2 1 LDPAQSASRENLLEEQGSIALR 22 1 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 1 LDPAQS(0.12)AS(0.88)RENLLEEQGSIALR 61.181 0.0074586 4839600 5554.8 4325.8 3432.5 3946.7 5540.5 4105.9 6402.1 6556.5 4843.3 4786.1 TRUE FALSE 5980.079759 4110.987062 3546.937837 3624.241985 5322.952131 4262.152902 5561.49658 7413.457062 5264.561479 4629.929949 1.291613442 0.887915607 0.766088877 0.78278549 1.149683082 0.920565311 1.20120534 1.601202857 1.137071519 1 12.17677465 -7.366581514 4.459010815 1.296999973 0.954017062 0.274867751 0.207617912 0.255644926 8.428581001 0.090294089 0.05940039 4.30E-08 7.366581514 -0.342982911 LDPHLVLDQLR ddPTM_A459_MK2206_30min_R2 1 LDPHLVLDQLR 11 0 P35579;P35579-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35579-2;P35580 MYH9;MYH10 Myosin-9;Myosin-10 0 111.5 0.01154 5355700 40494 52494 48779 53993 53037 57458 59852 47088 53304 49946 FALSE TRUE 43594.25177 49887.22429 50405.26751 49581.59918 50954.50089 59644.60445 51993.3605 53242.56328 57940.28557 48316.26611 0.902268641 1.032514064 1.043235986 1.026188553 1.054603449 1.234462206 1.076104689 1.101959393 1.19918798 1 15.56022135 -3.452925887 0.513609551 1.120262447 0.207115438 0.45003206 0.067163157 13.89553771 0.970200821 0.036853114 10.28911479 0.000352431 3.452925887 -0.913147009 LDPHNHVLYSNR ddPTM_A459_MK2206_30min_R1 2 LDPHNHVLYSNR 12 0 P31948-2;P31948-3;P31948;F5GXD8;F5H783 P31948-2 STIP1 Stress-induced-phosphoprotein 1 0 ; 88.803 0.015031 50118000 14027.9 14050.4 14008.8 11533.3 16539.4 14929.1 16434.2 14413.8 11625.6 10300.3 FALSE TRUE 12834.75344 13135.71641 13057.92169 12421.59676 15880.60068 15774.37274 15337.9045 14287.78167 12834.12272 11576.37893 1.108701911 1.134699934 1.127979809 1.073012282 1.371810717 1.362634451 1.324931103 1.234218555 1.108647428 1 13.49889643 -6.241209213 24.88568154 1.256425552 1.113990104 0.215839875 0.109409523 1048.734204 1290076.271 0.03252205 0.041933315 5.74E-07 6.241209213 -0.142435448 LDPPPS(ph)PHANR ddPTM_A459_MK2206_30min_R1 2 LDPPPSPHANR 11 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211;H7C0A7 E7EUN2 AGAP1 "Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1" 1 LDPPPS(1)PHANR;LDPPPS(1)PHANR 82.651 0.026183 29620000 2971.4 3142.3 3065.3 2843.9 3600 3438.4 4022.6 3173.8 2760.7 2372.1 TRUE FALSE 2718.666827 2937.735699 2857.235976 3062.937671 3456.604377 3633.079237 3754.259694 3146.051801 3047.684644 2665.973656 1.019765075 1.101937257 1.071742014 1.148900201 1.296563591 1.362758866 1.40821335 1.180076102 1.14317883 1 11.38044681 -6.013200147 3.297744643 1.255584188 1.069270349 0.298408487 0.111384553 0.280122078 6.336588795 0.034369172 0.049818599 9.70E-07 6.013200147 -0.186313839 LDPPPS(ph)PHANR ddPTM_A459_MK2206_30min_R2 2 LDPPPSPHANR 11 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211;H7C0A7 E7EUN2 AGAP1 "Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1" 1 LDPPPS(1)PHANR;LDPPPS(1)PHANR 89.26 0.019506 43765000 174464 205818 189792 208908 192596 195614 194016 162309 171958 207223 TRUE FALSE 187821.098 195597.3774 196119.5706 191839.5481 185033.7133 203058.2278 168541.4661 183523.3436 186914.596 200461.3305 0.936944285 0.975736203 0.97834116 0.956990297 0.923039435 1.012954605 0.840767971 0.915504966 0.932422206 1 17.61296444 -7.241867233 24.97314254 0.915132515 0.963005679 0.179684348 0.042704183 1184.03015 1510769.013 0.015637554 0.012095179 5.73E-08 7.241867233 0.047873164 LDPPPS(ph)PHSNR ddPTM_A459_MK2206_30min_R2 1 LDPPPSPHSNR 11 0 Q96P47;Q96P47-2;Q96P47-4;H0Y873 Q96P47 AGAP3 "Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3" 1 LDPPPS(0.888)PHS(0.112)NR 74.789 0.036056 6116000 45714 62371 53244 59426 60317 53953 62161 50975 51290 53298 TRUE FALSE 49213.89899 59273.74684 55019.12839 54570.70571 57948.65151 56006.21922 53999.18603 57637.60752 55751.11149 51558.89062 0.954518191 1.149631928 1.067112339 1.058415048 1.123931311 1.086257259 1.047330254 1.11789852 1.081309369 1 15.6539336 -4.74211647 24.91809528 1.084268833 0.954517735 0.467140425 0.040518612 1096.682644 1414163.865 0.00938227 0.349255196 1.81E-05 4.74211647 -0.129751098 LDQLIYIPLPDEK ddPTM_A459_MK2206_30min_R1 2 LDQLIYIPLPDEK 13 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 172.76 0.0023183 41220000 8845.5 9632.9 9618.1 10837.6 9896 9381.6 9428.7 8926.4 6716.8 8454.1 FALSE TRUE 8093.143775 9005.796459 8965.25017 11672.31383 9501.821365 9912.778085 8799.728627 8848.357426 7415.035396 9501.457733 0.851779169 0.947833134 0.943565758 1.228476109 1.000038271 1.043290236 0.926145111 0.931263147 0.780410291 1 13.21393316 -7.495814169 2.833145332 0.892275356 1.007261389 0.157473828 0.103967349 0.488770395 7.865778468 0.055653531 0.031740243 3.19E-08 7.495814169 0.114986033 LDQPGNLPGS(ph)NRR ddPTM_A459_MK2206_30min_R1 2 LDQPGNLPGSNRR 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDQPGNLPGS(1)NRR;LDQPGNLPGS(1)NRR 111.64 0.0093045 13359300 4254.7 4801.7 3482.3 3257.1 4223.1 4341.7 3622.3 2933.1 2924.8 2219.58 TRUE FALSE 3892.815423 4489.108457 3245.931178 3507.962406 4054.884984 4587.523302 3380.662976 2907.456216 3228.843426 2494.558327 1.560522911 1.79956043 1.301204763 1.406245894 1.625492152 1.839012242 1.355215045 1.165519436 1.294354753 1 11.28456869 -7.513977584 5.419922257 1.184496851 1.580943447 0.583628414 0.165129786 0.137234329 13.41248539 0.079213099 0.048512129 3.06E-08 7.513977584 0.396446596 LDQPGNLPGS(ph)NRR ddPTM_A459_MK2206_30min_R2 1 LDQPGNLPGSNRR 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDQPGNLPGS(1)NRR 104.16 0.0040566 18358000 102600 120250 86449 124830 73757 92876 92487 90342 75503 82389 TRUE FALSE 110455.1349 114278.5599 89331.16651 114630.9897 70860.92958 96410.46126 80343.3458 102150.0096 82070.11446 79700.65368 1.385874893 1.433847209 1.120833549 1.438269128 0.889088437 1.209657096 1.008063825 1.281670913 1.029729503 1 16.28230394 -5.60058003 0.952135947 1.093693774 1.435331955 0.396206261 0.146902995 0.814327402 1.255388981 0.054400054 0.221484041 2.51E-06 5.60058003 0.341638181 LDQPVS(ph)APPS(ph)PR ddPTM_A459_MK2206_30min_R1 1 LDQPVSAPPSPR 12 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 2 LDQPVS(1)APPS(1)PR 135.61 0.026852 38434000 10404 9160.8 9191.4 8259.3 9750.6 8264.4 8774.3 8178.3 7344.6 6835.8 TRUE FALSE 9519.085166 8564.430255 8567.513377 8895.432717 9362.212955 8732.323186 8188.982457 8106.797985 8108.097453 7682.670512 1.239033374 1.114772558 1.115173866 1.157856855 1.218614405 1.136626017 1.065903118 1.055205735 1.055374878 1 12.90739217 -7.267676963 2.792320484 1.043973081 1.163580606 0.690542972 0.039798314 0.178517218 2.786120248 0.018699473 0.012580348 5.40E-08 7.267676963 0.119607525 LDQPVSAPPS(ph)PR ddPTM_A459_MK2206_30min_R1 1 LDQPVSAPPSPR 12 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 LDQPVSAPPS(1)PR 115.37 0.0052724 47754000 3674.3 3987.3 3614.5 3052.6 3564.3 3600.5 4079.7 3270.3 3259.3 3473.1 TRUE FALSE 3361.78149 3727.726045 3369.157811 3287.711781 3422.326383 3804.357199 3807.550657 3241.708112 3598.115899 3903.373849 0.861250196 0.95500103 0.863139925 0.842274378 0.876761109 0.97463306 0.975451188 0.830488761 0.921796384 1 11.93050593 -6.727281907 24.81039442 0.932065532 0.880871918 0.25140741 0.051413939 306.0323724 222286.7417 0.017688835 0.017687852 1.87E-07 6.727281907 -0.051193614 LDQPVSAPPS(ph)PR ddPTM_A459_MK2206_30min_R2 6 LDQPVSAPPSPR 12 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 LDQPVS(0.041)APPS(0.959)PR;LDQPVSAPPS(1)PR;LDQPVSAPPS(1)PR;LDQPVSAPPS(1)PR;LDQPVSAPPS(1)PR;LDQPVS(0.034)APPS(0.966)PR 145.81 0.00067308 301977900 523515 577061 527572 657051 537556 530049 624980 487142 507001 577338 TRUE FALSE 563595.7109 548404.9899 545160.9872 603367.8315 516448.8504 550220.3861 542919.3753 550813.132 551099.0305 558499.5083 1.009124811 0.981925645 0.976117219 1.080337265 0.924707798 0.985176133 0.972103587 0.986237452 0.986749357 1 19.09119649 -6.292031039 24.99037062 0.975422021 1.00718276 0.224150212 0.032381777 1184.712333 967788.9718 0.009929405 0.01126047 5.10E-07 6.292031039 0.031760739 LDQVVES(ph)PAIPR ddPTM_A459_MK2206_30min_R2 1 LDQVVESPAIPR 12 0 P16157-14;H0YBS0;P16157-15;P16157-12;P16157-21;P16157;P16157-3;P16157-16;P16157-5;P16157-8;P16157-10;P16157-13;P16157-4;P16157-7;P16157-6;P16157-9;P16157-11;P16157-2 P16157-14 ANK1 Ankyrin-1 1 LDQVVES(1)PAIPR 90.853 0.02384 2876100 22826 21002 19588 29290 26740 22134 22583 24538 26978 21975 TRUE FALSE 24573.57611 19959.07122 20241.05414 26896.91331 25690.05324 22976.32488 19617.82497 27745.20085 29324.49767 21257.95755 1.155970702 0.938898818 0.952163635 1.26526329 1.208491135 1.080834075 0.922846183 1.305167761 1.379459791 1 14.37571537 -5.751882733 24.99925809 1.166813582 1.007999816 0.190947032 0.141533407 341.2809299 892748.4183 0.040439152 0.068909564 1.77E-06 5.751882733 -0.158813765 LDRETEELHHDR ddPTM_A459_MK2206_30min_R1 4 LDRETEELHHDR 12 1 O60869-2;O60869-3;O60869 O60869-2 EDF1 Endothelial differentiation-related factor 1 0 ;;; 117.95 0.0063368 68462600 17974.1 14936.01 17183.12 16413.14 22518.7 19045.7 19924.83 17925 13688.53 10943.6 FALSE TRUE 16445.30841 13963.67303 16016.77769 17677.28289 21621.73249 20124.05108 18595.68095 17768.28361 15111.50168 12299.37579 1.337084799 1.135315586 1.302243135 1.437250409 1.757953645 1.636184748 1.511920708 1.444649218 1.228639724 1 13.58629748 -8.510397655 2.5239049 1.001977325 1.449667325 0.42847359 0.163616373 0.305160433 4.5480083 0.1838437 0.049935768 3.09E-09 8.510397655 0.44769 LDRETEELHHDR ddPTM_A459_MK2206_30min_R2 3 LDRETEELHHDR 12 1 O60869-2;O60869-3;O60869 O60869-2 EDF1 Endothelial differentiation-related factor 1 0 ;; 110.64 0.0056827 40402200 168301 311900 212101 335165 326725 467431 245309 228816 363718 245636 FALSE TRUE 181186.254 296411.4995 219172.3415 307780.9474 313896.1348 485219.4142 213099.6336 258723.0368 395353.5342 237620.9174 0.762501281 1.247413329 0.922361313 1.295260328 1.320995383 2.041989483 0.896805028 1.088805816 1.663799376 1 17.85830231 -5.846493405 5.345244611 1.34887921 1.00526789 0.189657879 0.331612418 0.361878674 17.09190019 0.094803015 0.144088705 1.42E-06 5.846493405 -0.34361132 LDRPAGGPSAES(ph)PRPSSAYNGDLNGLLVPDPLCSGDSTSANK ddPTM_A459_MK2206_30min_R1 1 LDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDSTSANK 42 2 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 LDRPAGGPS(0.147)AES(0.425)PRPS(0.147)S(0.147)AY(0.135)NGDLNGLLVPDPLCSGDSTSANK 47.333 0.0017643 7994700 372.57 236.28 463.19 275.57 327.25 406.61 422.08 291.33 337.17 233.97 TRUE FALSE 340.8809651 220.8981291 431.7499533 296.7944491 314.2149395 429.6319068 393.9238133 288.7829325 372.2200281 262.95597 1.296342369 0.840057478 1.641909683 1.128684963 1.19493366 1.633854926 1.498059973 1.098217822 1.415522257 1 8.038677441 -5.25091154 24.99028717 1.335260762 1.068199973 0.16134055 0.234774351 1222.39292 2901621.896 0.05786988 0.149583114 5.61E-06 5.25091154 -0.26706079 LDRPAGGPSAES(ph)PRPSSAYNGDLNGLLVPDPLCSGDSTSANK ddPTM_A459_MK2206_30min_R2 1 LDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDSTSANK 42 2 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 LDRPAGGPS(0.183)AES(0.207)PRPS(0.207)S(0.207)AY(0.195)NGDLNGLLVPDPLCSGDSTSANK 47.251 0.001786 23391000 22979 24336 28721 28805 30047 33384 28815 25979 33715 29515 TRUE FALSE 24738.28991 23127.50963 29678.54381 26451.53936 28867.20381 34654.45151 25031.55589 29374.5445 36647.46976 28551.92797 0.866431505 0.81001569 1.039458486 0.92643619 1.011042191 1.213734202 0.876702824 1.028811243 1.283537483 1 14.80130055 -5.304519026 0.654951308 1.077393067 0.757962559 0.342616817 0.115468156 2.255006485 1.146787945 0.059158192 0.489143594 4.96E-06 5.304519026 -0.319430508 LDRPAGGPSAESPRPS(ph)SAYNGDLNGLLVPDPLCSGDSTSANK ddPTM_A459_MK2206_30min_R2 1 LDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDSTSANK 42 2 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 LDRPAGGPS(0.021)AES(0.073)PRPS(0.311)S(0.311)AY(0.283)NGDLNGLLVPDPLCSGDSTSANK 67.684 4.43E-08 19507000 12993 12235 12414 14375 15236 12569 16513 12831 15486 15460 TRUE FALSE 13987.75407 11627.42769 12827.87656 13200.51652 14637.75809 13047.3221 14344.82326 14508.05576 16832.94429 14955.54147 0.935289043 0.77746618 0.857734011 0.882650524 0.978751463 0.872407203 0.959164421 0.970078936 1.125532253 1 13.86839252 -7.398844838 0.766672706 1.054057317 0.860726026 0.560771013 0.059901638 0.487342476 0.548412281 0.051151767 0.028824778 3.99E-08 7.398844838 -0.193331291 LDRPAGGPSAESPRPSSAY(ph)NGDLNGLLVPDPLCSGDSTSANK ddPTM_A459_MK2206_30min_R2 1 LDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDSTSANK 42 2 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 LDRPAGGPS(0.028)AES(0.125)PRPS(0.143)S(0.143)AY(0.561)NGDLNGLLVPDPLCSGDSTSANK 60.312 4.25E-05 10096000 10527 10757 15107 15244 15568 11417 14485 10545 11631 12721 TRUE FALSE 11332.95521 10222.82302 15610.65984 13998.51644 14956.7221 11851.48194 12583.1021 11923.26771 12642.64336 12305.91481 0.920935614 0.830724345 1.268549318 1.137543746 1.215409202 0.963071996 1.02252472 0.968905432 1.027363146 1 13.58706429 LDRS(ph)FLEDTTPAR ddPTM_A459_MK2206_30min_R1 1 LDRSFLEDTTPAR 13 1 Q3YEC7;Q3YEC7-2;G3V154;F2Z2T0 Q3YEC7 RABL6 Rab-like protein 6 1 LDRS(1)FLEDTTPAR 74.338 0.027143 2597700 694.04 816.08 786.99 603.43 783.11 654.17 661.75 666.02 847.47 799.19 TRUE FALSE 635.0082535 762.9530437 733.5713115 649.9062832 751.9170704 691.2085401 617.6058649 660.1970574 935.5675392 898.1996908 0.706978927 0.849424745 0.816712941 0.723565472 0.837137975 0.769548851 0.687604183 0.735022584 1.041603052 1 9.810892415 -8.263220176 24.99998912 1.020801561 0.768732704 0.788312016 0.052849302 72.17551966 1013203.32 0.044475583 0.013789879 5.45E-09 8.263220176 -0.252068857 LDRS(ph)FLEDTTPAR ddPTM_A459_MK2206_30min_R2 2 LDRSFLEDTTPAR 13 1 Q3YEC7;Q3YEC7-2;G3V154;F2Z2T0 Q3YEC7 RABL6 Rab-like protein 6 1 LDRS(1)FLEDTTPAR;LDRS(1)FLEDTTPAR 69.314 0.035336 5315800 15387.8 11898.7 13333.6 14499.9 13879.1 13627 12219.4 10603.1 10862.7 14817.5 TRUE FALSE 16565.9018 11307.82786 13778.13557 13315.21179 13334.1368 14145.58503 10614.9781 11988.96158 11807.51801 14334.00619 1.155706338 0.78888119 0.961220149 0.928924657 0.930244945 0.986854955 0.740545104 0.836399916 0.823741657 1 13.80715426 -7.241627455 24.92906942 0.836538315 0.948398531 0.200869998 0.103379198 1183.629052 1489345.589 0.037137797 0.028728788 5.73E-08 7.241627455 0.111860216 LDS(ph)PPPS(ph)PITEASEAAEAAEAGNLAVSSR ddPTM_A459_MK2206_30min_R1 3 LDSPPPSPITEASEAAEAAEAGNLAVSSR 29 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 LDS(0.989)PPPS(0.99)PIT(0.018)EAS(0.003)EAAEAAEAGNLAVSSR;LDS(1)PPPS(0.999)PIT(0.001)EASEAAEAAEAGNLAVSSR;LDS(0.999)PPPS(0.997)PIT(0.005)EASEAAEAAEAGNLAVSSR 115.06 5.92E-13 9760200 1577.3 2107.83 1906.22 1726.271 1645.71 1561.042 1703.58 1634.31 1490.89 1453.32 TRUE FALSE 1443.142352 1970.609884 1776.831097 1859.228692 1580.157886 1649.426849 1589.937287 1620.0214 1645.873351 1633.368254 0.883537652 1.206470053 1.087832516 1.138278944 0.96742292 1.009831583 0.97341018 0.991828632 1.007656018 1 10.67363438 -6.270833211 24.92920409 0.991275918 1.088761434 0.230044857 0.077461059 844.3504617 2240722.192 0.022786156 0.026177066 5.36E-07 6.270833211 0.097485517 LDS(ph)PPPSPITEASEAAEAAEAGNLAVSSR ddPTM_A459_MK2206_30min_R1 4 LDSPPPSPITEASEAAEAAEAGNLAVSSR 29 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 LDS(0.99)PPPS(0.009)PITEASEAAEAAEAGNLAVSSR;LDS(0.956)PPPS(0.041)PIT(0.003)EASEAAEAAEAGNLAVSSR;LDS(0.899)PPPS(0.097)PIT(0.004)EASEAAEAAEAGNLAVSSR;LDS(0.695)PPPS(0.294)PIT(0.011)EASEAAEAAEAGNLAVSSR 237.41 1.47E-56 49889000 3635.75 4222.25 4812.3 3876.5 4616.33 4366.44 4351.11 5414.6 4832.02 4354.13 TRUE FALSE 3326.51037 3947.380758 4485.654484 4175.068702 4432.451801 4613.664059 4060.855391 5367.260723 5334.325771 4893.552496 0.679774126 0.806649313 0.916645829 0.853177463 0.905773833 0.942804652 0.829837913 1.096802523 1.090072248 1 12.25666646 -3.133626913 0.247926518 1.05537109 6.01E-22 0.663545524 0.07100615 15.23439196 0.410972395 0.10310198 5.672804426 0.000735145 3.133626913 -1.05537109 LDS(ph)PPPSPITEASEAAEAAEAGNLAVSSR ddPTM_A459_MK2206_30min_R2 5 LDSPPPSPITEASEAAEAAEAGNLAVSSR 29 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 LDS(0.93)PPPS(0.064)PIT(0.006)EASEAAEAAEAGNLAVSSR;LDS(0.962)PPPS(0.038)PIT(0.001)EASEAAEAAEAGNLAVSSR;LDS(0.92)PPPS(0.074)PIT(0.006)EASEAAEAAEAGNLAVSSR;LDS(0.689)PPPS(0.272)PIT(0.037)EAS(0.002)EAAEAAEAGNLAVSSR;LDS(0.942)PPPS(0.031)PIT(0.026)EAS(0.001)EAAEAAEAGNLAVSSR 122.67 8.83E-14 9457900 33886.3 36544.5 36770.6 43436 38660.3 35134.1 53862.5 43091.9 43619.6 55922.9 TRUE FALSE 36480.66118 34729.75327 37996.51345 39887.13986 37142.30237 36471.1528 46790.28905 48724.15929 47413.55396 54098.14035 0.674342241 0.641976841 0.702362654 0.737310739 0.686572628 0.674166479 0.864914926 0.90066237 0.87643593 1 15.72329138 -7.35776453 3.329901408 0.912827766 0.686414732 0.893125213 0.038305552 0.082139511 1.729891965 0.017893493 0.011519333 4.39E-08 7.35776453 -0.226413034 LDS(ph)PQIR ddPTM_A459_MK2206_30min_R1 1 LDSPQIR 7 0 B7ZM87;O75044;A0A075B7E9 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 LDS(1)PQIR 104.05 0.018241 3374800 1819.7 1648.2 1840.6 1307.2 1499.4 1182 1825.7 1625.2 1399.9 1772.6 TRUE FALSE 1664.924959 1540.90188 1715.6652 1407.88077 1439.675723 1248.923819 1703.910884 1610.991048 1545.424615 1992.20307 0.835720507 0.773466271 0.861189919 0.706695412 0.722655107 0.62690588 0.855289759 0.80864801 0.775736489 1 10.960149 -9.499478094 0.777662507 1.005918264 0.76611487 0.491244182 0.069147108 4.641959544 2.953022922 0.155967876 0.024965945 3.17E-10 9.499478094 -0.239803393 LDS(ph)SACLHAVGDK ddPTM_A459_MK2206_30min_R2 1 LDSSACLHAVGDK 13 0 E5RJP4;O94808 E5RJP4 GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 1 LDS(0.853)S(0.147)ACLHAVGDK 78.249 0.027438 5277800 109330 139600 109600 130220 136170 104080 131840 96215 85278 110050 TRUE FALSE 117700.3889 132667.667 113254.0093 119580.6094 130823.2816 108040.8373 114529.2496 108790.6309 92695.32629 106459.0775 1.105592793 1.246184638 1.063826702 1.123254233 1.228859808 1.014857914 1.075805392 1.021900935 0.870713221 1 16.69993944 -7.475703753 1.086670045 0.9448668 1.149073022 0.556278123 0.069914988 0.383305953 0.845990289 0.053174135 0.025469825 3.34E-08 7.475703753 0.204206222 LDS(ph)SPSVSSTLAAK ddPTM_A459_MK2206_30min_R1 1 LDSSPSVSSTLAAK 14 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.792)S(0.207)PSVSSTLAAK 250.05 1.85E-27 303270000 6222 6011.6 5514.8 3808 5145.1 5193.5 6247.6 4755.3 5552.7 5592.3 TRUE FALSE 5692.786227 5620.243747 5140.470741 4101.29282 4940.159772 5487.551482 5830.834003 4713.724913 6129.923036 6285.116344 0.905756698 0.894214751 0.817879966 0.652540477 0.78600928 0.87310261 0.927720934 0.749982125 0.975307807 1 12.61772374 -6.880993948 5.269069725 0.893323976 0.80777245 0.209484295 0.09035713 0.417890289 17.60519649 0.03399299 0.02997375 1.32E-07 6.880993948 -0.085551526 LDS(ph)SPSVSSTLAAK ddPTM_A459_MK2206_30min_R2 2 LDSSPSVSSTLAAK 14 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.871)S(0.129)PSVSSTLAAK;LDS(0.813)S(0.187)PSVSSTLAAK 238.88 1.90E-19 501460000 455760 445910 399360 458240 411970 370410 496440 399130 337503 468000 TRUE FALSE 490653.336 423766.7578 412674.4631 420800.3262 395793.9878 384506.2121 431256.8317 451297.6614 366858.4009 452729.1983 1.083767819 0.93602701 0.911526061 0.929474679 0.87424003 0.849307298 0.952571279 0.996837984 0.810326355 1 18.78828883 -4.752512929 3.423703503 0.913701557 1.111773989 0.435861095 0.057027204 0.318932875 5.74229736 0.014054333 0.173107597 1.77E-05 4.752512929 0.198072431 LDSDAGFHS(ph)LPR ddPTM_A459_MK2206_30min_R1 1 LDSDAGFHSLPR 12 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 LDSDAGFHS(1)LPR 85.988 0.020179 5001100 7441 5653.1 5865.1 4687.8 5195.7 5560.8 6190 5673.1 3338.5 4260.9 TRUE FALSE 6808.103876 5285.082163 5466.993353 5048.855168 4988.744267 5875.64769 5777.076394 5623.500685 3685.549022 4788.77246 1.421680385 1.103640277 1.141627296 1.054310935 1.041758469 1.226963223 1.206379389 1.174309436 0.769622915 1 12.22544017 -4.760184191 5.885014104 1.092972392 1.434914897 0.397655153 0.125346464 0.151132725 19.21401596 0.031086335 0.208892956 1.74E-05 4.760184191 0.341942505 LDSDAGFHS(ph)LPR ddPTM_A459_MK2206_30min_R2 3 LDSDAGFHSLPR 12 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 LDSDAGFHS(1)LPR;LDSDAGFHS(1)LPR;LDS(0.015)DAGFHS(0.985)LPR 119.65 0.0027947 10487700 120143 142160 114421 128110 115689 116300 117737 93509 106196 94439 TRUE FALSE 129341.2405 135100.5411 118235.739 117643.0032 111146.4686 120725.878 102277.9905 105730.9474 115432.7361 91357.46316 1.415770929 1.47881231 1.294209963 1.287721869 1.216610715 1.321467057 1.119536236 1.157332348 1.263528256 1 16.47923497 -1.522878745 0.122540267 0.943522178 2.599815314 0.755522248 0.065860558 43.96306289 0.370282508 0.426191066 12.4605882 0.03 1.522878745 1.656293135 LDSPT(ph)MSR ddPTM_A459_MK2206_30min_R2 2 LDSPTMSR 8 0 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 LDS(0.264)PT(0.736)MSR;LDS(0.231)PT(0.769)MSR 112.11 0.026458 11857900 126645 78762 89253 117815 89857 105539 162143 83539 130108 118925 TRUE FALSE 136341.0386 74850.79361 92228.65047 108189.1376 86328.76268 109555.3606 140853.4293 94457.83413 141424.5587 115044.487 1.185115794 0.650624776 0.801678141 0.940411318 0.750394608 0.952286924 1.224338802 0.821054851 1.229303223 1 16.81183232 -7.001396449 24.70655089 1.058697949 0.85400346 0.238925354 0.169823456 63.51998664 1123845.282 0.056963975 0.049536707 9.97E-08 7.001396449 -0.204694489 LDSQEPGRQT(ph)PDR ddPTM_A459_MK2206_30min_R1 2 LDSQEPGRQTPDR 13 1 Q8TB03-2;Q8TB03 Q8TB03-2 CXorf38 Uncharacterized protein CXorf38 1 LDSQEPGRQT(1)PDR;LDSQEPGRQT(1)PDR 138.28 0.010324 58417000 10724 10476.1 11107 9073.8 10714.1 8977 10204.4 10341.6 8206.8 7996.7 TRUE FALSE 9811.867486 9794.103986 10353.08779 9772.665648 10287.33471 9485.269982 9523.683095 10251.18448 9059.926228 8987.391568 1.091736953 1.089760462 1.151956906 1.087375083 1.144640759 1.055397432 1.059671544 1.140618432 1.008070713 1 13.13368674 -8.279287509 22.93151982 1.004035213 1.101742492 0.602186826 0.032052439 217.0863107 278907.8815 0.030440903 0.007953222 5.26E-09 8.279287509 0.097707279 LDSQEPGRQT(ph)PDR ddPTM_A459_MK2206_30min_R2 1 LDSQEPGRQTPDR 13 1 Q8TB03-2;Q8TB03 Q8TB03-2 CXorf38 Uncharacterized protein CXorf38 1 LDSQEPGRQT(1)PDR 87.824 0.034077 31378000 39782 43077 41073 50914 47289 49713 51605 37370 42850 51484 TRUE FALSE 42827.74051 40937.85882 42442.35332 46754.16333 45432.19625 51604.86305 44829.20151 42254.38731 46577.01554 49804.0813 0.859924315 0.821977994 0.852186251 0.938761686 0.912218338 1.036157313 0.900111002 0.848412142 0.935204793 1 15.60397635 -5.723213306 5.188185597 0.933903972 0.840605326 0.428698232 0.049546428 0.195652422 12.52833167 0.014293055 0.024496259 1.89E-06 5.723213306 -0.093298647 LDSQPQET(ph)SPELPR ddPTM_A459_MK2206_30min_R2 1 LDSQPQETSPELPR 14 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 LDS(0.001)QPQET(0.957)S(0.043)PELPR 125.33 0.0032463 3615000 14164 18960 17040 24470 14717 19474 25637 14318 19289 18011 TRUE FALSE 15248.40673 18018.47397 17608.1051 22470.72272 14139.13663 20215.09672 22270.8311 16189.41176 20966.72235 17423.30255 0.875173159 1.034159507 1.010606632 1.289693654 0.811507267 1.160233352 1.278220994 0.929181578 1.203372455 1 14.08873049 -4.540502392 1.409254511 1.091130765 0.674092929 0.161899333 0.144954169 4.021126776 4.72810883 0.040121263 2.793496188 2.88E-05 4.540502392 -0.417037836 LDSQPQETS(ph)PELPR ddPTM_A459_MK2206_30min_R1 5 LDSQPQETSPELPR 14 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 LDS(0.001)QPQET(0.231)S(0.769)PELPR;LDS(0.003)QPQET(0.36)S(0.637)PELPR;LDSQPQET(0.028)S(0.972)PELPR;LDSQPQET(0.026)S(0.974)PELPR;LDSQPQET(0.099)S(0.901)PELPR 201.72 5.53E-05 688766000 17028.5 16417.1 17027.6 14498.97 16819 14607.8 17235.9 15043.18 13317.68 12096.75 TRUE FALSE 15580.13665 15348.34381 15871.81395 15615.68318 16149.06362 15434.88101 16086.12456 14911.65906 14702.10049 13595.38672 1.145987016 1.128937641 1.167441154 1.148601618 1.187834076 1.13530283 1.183204634 1.096817573 1.081403626 1 13.73082957 -8.416796213 1.290954195 1.002488662 1.156246404 0.838275997 0.021473041 0.153175348 0.547543024 0.019520232 0.00604865 3.83E-09 8.416796213 0.153757741 LDSQPQETS(ph)PELPR ddPTM_A459_MK2206_30min_R2 7 LDSQPQETSPELPR 14 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 LDSQPQET(0.139)S(0.861)PELPR;LDSQPQET(0.081)S(0.919)PELPR;LDSQPQET(0.084)S(0.916)PELPR;LDSQPQET(0.228)S(0.772)PELPR;LDSQPQET(0.082)S(0.918)PELPR;LDSQPQET(0.033)S(0.967)PELPR;LDSQPQET(0.089)S(0.911)PELPR 188 9.07E-05 743472500 204309 263049 234447 266929 254057 246933 257697 207493 227387 244911 TRUE FALSE 219951.0541 249986.3692 242263.346 245120.0468 244081.4456 256330.2083 223861.0744 234613.0475 247164.7102 236919.5741 0.928378564 1.055152872 1.022555215 1.034612897 1.030229125 1.081929213 0.944882141 0.990264517 1.043243097 1 17.85403787 -10.31360165 14.93397503 1.000000212 1.016275556 0.007968349 0.045408112 0 0 0.043182636 0.010473328 4.86E-11 10.31360165 0.016275344 LDSS(ph)IISEGK ddPTM_A459_MK2206_30min_R1 1 LDSSIISEGK 10 0 G5EA36;P30260;P30260-2;I3L328 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 LDS(0.244)S(0.667)IIS(0.089)EGK 130.1 0.0028366 2835700 3024.1 2849.8 2994 2447.7 2681.2 2483.2 2743.3 2575.3 2721.6 2743.4 TRUE FALSE 2766.884415 2664.277502 2790.775622 2636.222278 2574.402126 2623.796638 2560.299462 2552.784424 3004.520059 3083.273104 0.897385448 0.86410688 0.905134099 0.855007711 0.83495754 0.850977695 0.830383614 0.827946256 0.974457973 1 11.59024697 -8.345171499 5.128315082 0.995581926 0.858057382 0.810203821 0.025031507 0.098864251 4.259949128 0.025943284 0.00681409 4.52E-09 8.345171499 -0.137524544 LDSS(ph)IISEGK ddPTM_A459_MK2206_30min_R2 1 LDSSIISEGK 10 0 G5EA36;P30260;P30260-2;I3L328 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 LDS(0.309)S(0.691)IISEGK 151.13 0.00068378 3695400 34565 29071 30492 28647 25726 24999 31080 20894 20852 28362 TRUE FALSE 37211.32298 27627.37641 31508.58806 26306.44846 24715.86798 25950.35446 26999.15867 23624.91754 22665.66927 27436.55026 1.356268285 1.00695518 1.148416538 0.958810354 0.900837304 0.945831535 0.984058069 0.861074636 0.826112213 1 14.74381148 -1.522878745 0.534302747 0.908347109 17.33122347 0.727884825 0.076175553 64.88046071 0.623999798 0.038390889 1215.04418 0.03 1.522878745 16.42287637 LDSS(ph)PSVSSTLAAK ddPTM_A459_MK2206_30min_R1 3 LDSSPSVSSTLAAK 14 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.004)S(0.995)PSVSSTLAAK;LDS(0.227)S(0.773)PSVSSTLAAK;LDS(0.226)S(0.774)PSVSSTLAAK 269.78 2.65E-44 586680000 16472.7 15655.2 16393.5 12350 13167.2 12767.6 15450.8 12528.9 15105.7 16234 TRUE FALSE 15071.61036 14636.04363 15280.75489 13301.19914 12642.72254 13490.49048 14420.10532 12419.36115 16675.99157 18245.19048 0.82605936 0.802186398 0.837522355 0.729024953 0.692934533 0.739399816 0.790351043 0.680692326 0.913993832 1 14.15522859 -8.467428444 4.780622401 0.999171384 0.763458104 0.71588386 0.050446818 0.100022351 4.692405906 0.051756712 0.013486185 3.41E-09 8.467428444 -0.23571328 LDSS(ph)PSVSSTLAAK ddPTM_A459_MK2206_30min_R2 4 LDSSPSVSSTLAAK 14 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.281)S(0.704)PS(0.013)VS(0.001)STLAAK;LDS(0.026)S(0.971)PS(0.003)VSSTLAAK;LDS(0.078)S(0.921)PS(0.001)VSSTLAAK;LDS(0.037)S(0.962)PS(0.001)VSSTLAAK 212.03 3.11E-06 608059000 603410 624367 575407 664411 585298 526510 662655 504774 463749 591828 TRUE FALSE 649607.5335 593361.8427 594590.7822 610126.496 562316.2596 546546.707 575647.6025 570749.6949 504085.0498 572516.7008 1.134652548 1.036409666 1.038556223 1.065692049 0.982183155 0.954638889 1.005468664 0.996913617 0.880472219 1 19.12695825 -3.85792112 0.364651757 0.956433104 1.381429091 0.606756747 0.040181882 8.65061056 0.543333765 0.034825436 1.841497038 0.000138701 3.85792112 0.424995987 LDSS(ph)PSVSSTLAAKDDPDGK ddPTM_A459_MK2206_30min_R1 1 LDSSPSVSSTLAAKDDPDGK 20 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.128)S(0.357)PS(0.115)VS(0.068)S(0.166)T(0.166)LAAKDDPDGK 51.044 0.037706 18312000 3143.7 2795.1 3137.4 2860.4 2606.8 2339.3 2574.9 2959.9 2516.8 2082.2 TRUE FALSE 2876.311807 2613.138482 2924.442029 3080.708504 2502.965636 2471.749144 2403.133119 2934.021906 2778.430366 2340.158656 1.229109744 1.116650136 1.249676821 1.316452838 1.069570916 1.056231439 1.026910339 1.253770508 1.187282905 1 11.19239063 -6.281072115 24.66664442 1.105910527 1.221571124 0.358754458 0.08401691 924.4310378 1161456.032 0.027949481 0.031734505 5.24E-07 6.281072115 0.115660597 LDSS(ph)PSVSSTLAAKDDPDGK ddPTM_A459_MK2206_30min_R2 1 LDSSPSVSSTLAAKDDPDGK 20 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.206)S(0.323)PS(0.323)VS(0.049)S(0.049)T(0.049)LAAKDDPDGK 58.29 0.019752 20622000 77626 140650 103800 95152 149760 101960 113090 96301 102460 97458 TRUE FALSE 83569.10624 133665.5255 107260.6402 87377.77722 143879.6699 105840.1592 98241.14715 108887.8714 111371.7856 94277.95344 0.886411968 1.417781365 1.137706497 0.926810288 1.526122117 1.12263955 1.042037333 1.15496643 1.181313144 1 16.52463282 -10.77900559 0.468550735 0.925414582 1.167128968 0.055757029 0.186267115 79.64742618 9.577289009 7.68599135 0.094214563 1.66E-11 10.77900559 0.241714386 LDSSEMDHS(ph)ENEDYTMSSPLPGK ddPTM_A459_MK2206_30min_R1 2 LDSSEMDHSENEDYTMSSPLPGK 23 0 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LDS(0.001)S(0.001)EMDHS(0.985)ENEDY(0.009)T(0.003)MSSPLPGK;LDS(0.001)S(0.001)EMDHS(0.999)ENEDYTMSSPLPGK 131.56 4.87E-06 34833000 14694.3 13179.3 13976.8 11568.5 15328.1 15864.7 15206.2 12116.6 14086.1 13136.8 TRUE FALSE 13444.47262 12321.32517 13028.09376 12459.50787 14717.54932 16762.9456 14191.82214 12010.66584 15550.4005 14764.28596 0.91060771 0.834535799 0.882405948 0.843895052 0.99683448 1.135371236 0.961226447 0.813494528 1.053244332 1 13.84982397 -6.265842834 24.6947057 0.989530269 0.86651966 0.381952369 0.078110625 377.7319882 2118329.769 0.025486246 0.029912943 5.42E-07 6.265842834 -0.123010609 LDSSEMDHS(ph)ENEDYTMSSPLPGK ddPTM_A459_MK2206_30min_R2 3 LDSSEMDHSENEDYTMSSPLPGK 23 0 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LDS(0.005)S(0.004)EMDHS(0.891)ENEDY(0.065)T(0.029)MS(0.004)S(0.002)PLPGK;LDS(0.004)S(0.004)EMDHS(0.992)ENEDYTMSSPLPGK;LDS(0.004)S(0.004)EMDHS(0.992)ENEDYTMSSPLPGK 127.94 5.94E-06 13366200 115402 114979 101347 130038 112339 103187 143751 106296 89307 121555 TRUE FALSE 124237.2658 109269.3101 104725.8584 119413.4794 107928.0064 107113.8536 124876.321 120189.2522 97074.76143 117588.6703 1.056541124 0.929250325 0.890611809 1.015518579 0.917843582 0.910919847 1.06197579 1.022115922 0.825545192 1 16.84338954 LDSSPSVSS(ph)TLAAKDDPDGK ddPTM_A459_MK2206_30min_R1 1 LDSSPSVSSTLAAKDDPDGK 20 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.005)S(0.02)PS(0.085)VS(0.112)S(0.666)T(0.112)LAAKDDPDGK 106.31 0.00026132 12251000 3711 3756.8 3673.5 3915.3 3233.5 2423.1 2692.7 3311.5 3006.7 2277 TRUE FALSE 3395.359963 3512.231637 3424.153055 4216.857084 3104.702848 2560.293828 2513.074896 3282.547905 3319.257225 2559.09195 1.326783105 1.372452301 1.338034397 1.647794283 1.213204882 1.00046965 0.98201821 1.282700258 1.297044924 1 11.32141627 -6.509131471 24.3681776 1.120282873 1.414167412 0.548079153 0.132407871 391.2487247 693522.2591 0.044102291 0.047942923 3.10E-07 6.509131471 0.293884539 LDT(ph)GSPEPETR ddPTM_A459_MK2206_30min_R1 1 LDTGSPEPETR 11 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LDT(0.633)GS(0.367)PEPETR 145.14 0.0016537 26379000 3048.3 3410.3 3465.9 2502.6 3185.3 2934.3 3428.5 2993.4 2972.8 2715.5 TRUE FALSE 2789.026078 3188.28885 3230.644365 2695.350686 3058.422756 3100.43753 3199.791021 2967.229019 3281.833198 3051.916641 0.913860503 1.04468412 1.058562453 0.883166548 1.002131813 1.015898498 1.048452955 0.972251004 1.075335137 1 11.57549984 -6.520314174 24.18606477 1.020808188 0.980585374 0.136296805 0.055393156 167.5578947 1580233.444 0.01819337 0.018516075 3.02E-07 6.520314174 -0.040222814 LDT(ph)PDINIVLK ddPTM_A459_MK2206_30min_R1 2 LDTPDINIVLK 11 0 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 LDT(1)PDINIVLK;LDT(1)PDINIVLK 128.57 0.0064357 11021000 5146.8 6277.1 6425.6 6028.6 4047 3498 4552.2 5226.5 5142.1 4747.7 TRUE FALSE 4709.037633 5868.459649 5989.448175 6492.923817 3885.79942 3696.053737 4248.531044 5180.805262 5676.639696 5335.880919 0.882522999 1.099810835 1.122485353 1.216841964 0.728239531 0.692679202 0.796219239 0.970937197 1.063861766 1 12.38151075 -6.261360818 25 0.860782323 1.084805687 0.352767888 0.135184456 8.192627177 2606986.759 0.04432706 0.053669546 5.48E-07 6.261360818 0.224023364 LDTDDLDEIEK ddPTM_A459_MK2206_30min_R2 1 LDTDDLDEIEK 11 0 I3L352;I3L0H8;F6QDS0;H3BQK0;Q9UMR2-3;Q9NUU7-2;Q9UMR2-2;Q9UMR2-4;Q9NUU7;Q9UMR2 I3L352 DDX19A;DDX19B ATP-dependent RNA helicase DDX19B;ATP-dependent RNA helicase DDX19A 0 126.67 0.043132 2286900 14956 15003 18776 17991 17287 14168 19698 15206 14642 15935 FALSE TRUE 16101.04286 14257.97284 19401.98247 16521.07775 16608.22552 14707.17317 17111.62894 17193.47641 15915.53469 15415.04226 1.044502026 0.92493894 1.25863959 1.071750403 1.077403827 0.954079329 1.110060463 1.115370047 1.032467795 1 13.91205122 LDTGPQSLS(ph)GK ddPTM_A459_MK2206_30min_R1 4 LDTGPQSLSGK 11 0 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 LDTGPQS(0.099)LS(0.9)GK;LDTGPQS(0.002)LS(0.997)GK;LDTGPQS(0.049)LS(0.951)GK;LDTGPQS(0.004)LS(0.996)GK 106.55 0.011056 68109000 12662 10804.2 12557.2 9943.4 9713.6 6303.9 6959.1 6407.1 5732.86 5656.86 TRUE FALSE 11585.03041 10100.84462 11704.85225 10709.24239 9326.686743 6660.82137 6494.871137 6351.0834 6328.811312 6357.674524 1.822211937 1.588764033 1.84105874 1.68445905 1.466996574 1.047682033 1.021579685 0.998963281 0.995460099 1 12.63428345 -6.608389451 2.113389982 0.998930257 1.735746938 0.963784609 0.066395325 0.052159828 0.474583558 0.024147508 0.024607746 2.46E-07 6.608389451 0.736816681 LDTGPQSLS(ph)GK ddPTM_A459_MK2206_30min_R2 4 LDTGPQSLSGK 11 0 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 LDTGPQS(0.044)LS(0.956)GK;LDT(0.001)GPQS(0.003)LS(0.995)GK;LDTGPQS(0.02)LS(0.98)GK;LDT(0.012)GPQS(0.007)LS(0.982)GK 119.87 0.0048957 117165000 580876 410122 459320 441661 390204 211164 277425 180918 129193 200373 TRUE FALSE 625348.3132 389755.9379 474633.4996 405575.8835 374882.6303 219199.994 240998.7643 204564.6038 140429.9736 193834.8454 3.22619141 2.010763013 2.448648996 2.092378605 1.934031157 1.130859591 1.243320125 1.055355157 0.724482604 1 17.56446842 -6.27143106 0.561585415 0.814252857 2.916900385 0.855955166 0.28358269 0.385302399 0.247683751 0.209194306 0.426894241 5.35E-07 6.27143106 2.102647528 up LDTGS(ph)PEPETR ddPTM_A459_MK2206_30min_R1 3 LDTGSPEPETR 11 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LDT(0.001)GS(0.999)PEPETR;LDT(0.165)GS(0.835)PEPETR;LDT(0.003)GS(0.997)PEPETR 130.69 0.0023466 39206600 10210.2 9834.2 10613.7 8867.1 10593.9 8864.9 10573.5 9253.6 9354.1 8767.5 TRUE FALSE 9341.768874 9193.991793 9893.271615 9550.045578 10171.92253 9366.822977 9868.161107 9172.696751 10326.49217 9853.684091 0.948048343 0.933051203 1.004017535 0.96918528 1.032296391 0.950590956 1.001469198 0.930890078 1.047982874 1 13.2664475 -5.256028846 24.87272128 0.989061745 0.940549768 0.271263647 0.033480854 526.1250882 2418623.96 0.007927577 0.019726997 5.55E-06 5.256028846 -0.048511976 LDTGS(ph)PEPETR ddPTM_A459_MK2206_30min_R2 2 LDTGSPEPETR 11 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LDT(0.001)GS(0.996)PEPET(0.003)R;LDT(0.001)GS(0.999)PEPETR 118.87 0.0051854 128397000 187422 195715 193087 210681 193184 186769 196432 146020 155071 188677 TRUE FALSE 201771.1724 185996.0777 199524.4242 193467.6884 185598.6255 193876.6252 170640.2424 165105.3154 168558.7953 182520.4849 1.10547138 1.019042206 1.093161813 1.059977944 1.016864631 1.062218442 0.934910087 0.904585123 0.923506177 1 17.47769887 -7.263509162 23.92914907 0.932799093 1.057238906 0.7341996 0.034843937 48.87805168 565079.1065 0.013522324 0.009632519 5.45E-08 7.263509162 0.124439813 LDVGNFSWGSECCTR ddPTM_A459_MK2206_30min_R1 1 LDVGNFSWGSECCTR 15 0 P62241 P62241 RPS8 40S ribosomal protein S8 0 171.36 0.00064207 10039000 1193.6 1053.8 1407.6 1113.5 1198.1 957.83 1205.2 1113 1263.2 842.97 FALSE TRUE 1092.078052 985.1974285 1312.056034 1199.261963 1150.37714 1012.061507 1124.803307 1103.269158 1394.51416 947.4034877 1.152706388 1.039892128 1.384896774 1.265840773 1.214242036 1.068247605 1.187248434 1.164518785 1.471932686 1 9.887835173 LDVTILS(ph)PSR ddPTM_A459_MK2206_30min_R1 2 LDVTILSPSR 10 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 1 LDVTILS(0.807)PS(0.193)R;LDVTILS(0.908)PS(0.092)R 158.06 0.00048171 47612000 6942.1 6816.3 6304.2 5161.3 6301.4 5811.9 6751.9 5800.4 4837.9 5027.2 TRUE FALSE 6351.637941 6372.557631 5876.288469 5558.82422 6050.401895 6140.964755 6301.493071 5749.687714 5340.817018 5650.007489 1.124182216 1.127884811 1.040049678 0.98386139 1.070866172 1.086894976 1.11530703 1.017642494 0.945276095 1 12.46403706 -1.522878745 0.166831113 0.987939213 1.500022716 0.345541135 0.048944543 86.49398703 0.923612968 0.149563915 10.99736456 0.03 1.522878745 0.512083503 LDVTILS(ph)PSR ddPTM_A459_MK2206_30min_R2 1 LDVTILSPSR 10 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 1 LDVT(0.005)ILS(0.892)PS(0.104)R 92.112 0.027084 13067000 10905 12176 10437 10529 11240 10982 8921.8 8007.7 10327 8361.6 TRUE FALSE 11739.89518 11571.35755 10784.96437 9668.747019 10798.66112 11399.92771 7750.356943 9054.333885 11225.22379 8088.761677 1.451383494 1.430547469 1.333327004 1.19533093 1.33502031 1.409353886 0.958163592 1.119372068 1.387755536 1 12.98170314 -1.522878745 0.125367388 0.959621085 2.587322732 0.426288318 0.130747315 89.138283 0.764696847 0.817007417 25.48627458 0.03 1.522878745 1.627701648 LDVTILS(ph)PSRK ddPTM_A459_MK2206_30min_R2 1 LDVTILSPSRK 11 1 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 1 LDVT(0.002)ILS(0.845)PS(0.153)RK 101.53 0.027259 14893000 60820 79850 76422 63150 88953 74415 71179 41903 68313 70209 TRUE FALSE 65476.42596 75884.76511 78969.87134 57990.44299 85460.25827 77246.91497 61833.1118 47379.86597 74254.74126 67918.08608 0.964049928 1.117298344 1.162722272 0.853829169 1.258284254 1.137354119 0.910407159 0.697603079 1.093298494 1 16.05150818 -7.276114417 20.81367216 0.900127172 1.085124895 0.223509389 0.140120246 117.853388 167147.7568 0.057031767 0.038767525 5.30E-08 7.276114417 0.184997723 LDVTILSPS(ph)R ddPTM_A459_MK2206_30min_R1 1 LDVTILSPSR 10 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 1 LDVTILS(0.443)PS(0.557)R 162.93 0.00040065 30674000 3431.3 3281.5 3456.1 2603.5 3704.2 3104.8 3336.8 2853.1 2961.1 3080.7 TRUE FALSE 3139.449917 3067.873754 3221.509561 2804.022021 3556.65387 3280.591093 3114.20816 2828.155647 3268.916941 3462.360374 0.906736901 0.886064252 0.930437393 0.809858512 1.027233877 0.94750134 0.899446569 0.816828794 0.944129608 1 11.75754018 -6.24122068 24.96946087 0.928459883 0.886842364 0.154485917 0.060835125 2168.544173 2678084.809 0.01864 0.024028438 5.74E-07 6.24122068 -0.04161752 LDVTILSPS(ph)R ddPTM_A459_MK2206_30min_R2 2 LDVTILSPSR 10 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 1 LDVTILS(0.168)PS(0.831)R;LDVTILS(0.428)PS(0.572)R 119.21 0.0054703 13901800 29950.2 36898 33361 39347 31039 39684 38451 29333 26015.1 30675 TRUE FALSE 32243.21034 35065.69897 34473.23909 36132.22424 29820.2529 41194.20243 33402.33751 33166.92382 28277.84637 29674.07726 1.086578365 1.181694671 1.161729101 1.217635983 1.004926038 1.38822185 1.125640309 1.117706998 0.952947791 1 14.85691555 -8.09882307 2.786918582 0.975692118 1.170530647 0.387248257 0.093799786 0.280767897 3.957044478 0.074483207 0.024203511 7.96E-09 8.09882307 0.194838529 LDY(ph)RIS(ph)YMLSIY(ph)K ddPTM_A459_MK2206_30min_R1 3 LDYRISYMLSIYK 13 1 Q14571 Q14571 ITPR2 "Inositol 1,4,5-trisphosphate receptor type 2" 3 LDY(0.5)RIS(1)Y(0.5)MLS(0.001)IY(0.999)K;LDY(0.819)RIS(1)Y(0.181)MLS(0.001)IY(0.999)K;LDY(0.698)RIS(1)Y(0.302)MLSIY(1)K 116.71 0.0012085 10048400 2031.93 1581.29 1982.95 1620.55 1958.87 1713.75 1971.68 1975.6 1896.02 1981.63 TRUE FALSE 1859.103683 1478.347734 1848.352879 1745.365042 1880.84406 1810.781044 1840.152825 1958.327537 2093.118064 2227.129285 0.834753373 0.663790712 0.829926171 0.783683755 0.844514987 0.813056097 0.826244277 0.879305728 0.939827821 1 11.12096959 -8.040787182 0.42279854 1.012730737 0.758754257 0.697148198 0.046817153 0.556004773 0.276457809 0.054783532 0.038382718 9.10E-09 8.040787182 -0.25397648 LDY(ph)RIS(ph)YMLSIY(ph)K ddPTM_A459_MK2206_30min_R2 2 LDYRISYMLSIYK 13 1 Q14571 Q14571 ITPR2 "Inositol 1,4,5-trisphosphate receptor type 2" 3 LDY(0.845)RIS(0.989)Y(0.155)MLS(0.025)IY(0.986)K;LDY(0.839)RIS(0.998)Y(0.163)MLS(0.011)IY(0.989)K 72.496 0.018454 2016380 1311.25 2318.6 2044.75 3600.1 4074.9 3230.25 3188.58 1864.29 1929.91 3943.4 TRUE FALSE 1411.640308 2203.461696 2112.920944 3305.960314 3914.898951 3353.179427 2769.915616 2107.959104 2097.770083 3814.727181 0.370050135 0.577619733 0.553885204 0.866630864 1.026259223 0.879008974 0.726111065 0.552584498 0.549913528 1 11.89736417 -5.647081811 4.815857229 0.790496329 0.494977875 0.427282324 0.159705186 0.237901232 8.944696165 0.049059631 0.086914974 2.25E-06 5.647081811 -0.295518454 LDYGQHVVAGT(ph)PGR ddPTM_A459_MK2206_30min_R1 1 LDYGQHVVAGTPGR 14 0 I3L3H2;P38919 I3L3H2 EIF4A3 "Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed" 1 LDYGQHVVAGT(1)PGR 127.2 0.0028897 5462100 1534.8 1412.4 1337.7 1193.9 1065.4 1287.3 1424.1 1197.4 1302.2 1424.8 TRUE FALSE 1404.2572 1320.452503 1246.900651 1285.854385 1022.962862 1360.185814 1329.100887 1186.931258 1437.56835 1601.314981 0.876940026 0.824605102 0.778672944 0.802999035 0.638826761 0.849418028 0.830005904 0.741222853 0.897742398 1 10.6450414 -8.516106557 4.124934077 0.999655254 0.792245127 0.526969127 0.062860986 0.138795836 6.934004216 0.06143376 0.016083862 3.05E-09 8.516106557 -0.207410127 LDYVPSSAS(ph)R ddPTM_A459_MK2206_30min_R2 5 LDYVPSSASR 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LDYVPSS(0.007)AS(0.993)R;LDYVPSSAS(1)R;LDYVPSSAS(1)R;LDYVPSSAS(1)R;LDYVPSSAS(1)R 147.58 0.00081938 104138500 302721 390356 354962 442427 341895 352564 389886 295480 322150 348096 TRUE FALSE 325897.5525 370971.4887 366796.2559 406279.2988 328470.4844 365981.0701 338693.4999 334100.2505 350170.0247 336737.656 0.967808461 1.101663215 1.089264148 1.206515789 0.975449221 1.086843314 1.005808212 0.992167774 1.039889714 1 18.36126554 -6.335645056 25 1.019264733 1.091915242 0.265601614 0.060693055 193.4996118 65189.20144 0.018802821 0.0213204 4.62E-07 6.335645056 0.072650509 LEAEIATYR ddPTM_A459_MK2206_30min_R1 1 LEAEIATYR 9 0 P05783;F8VZY9;CON__P05784 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 135.71 0.037437 30459000 3143.4 3281.2 2987.1 2845.9 3180.6 2760.8 3640 3028 2284.2 2552.2 FALSE TRUE 2876.037323 3067.593284 2784.343975 3065.091711 3053.909967 2917.11411 3397.182242 3001.526515 2521.650764 2868.385804 1.002667535 1.069449333 0.970700653 1.068577214 1.064678943 1.016988059 1.184353317 1.046416598 0.879118409 1 11.48602337 -8.180685796 8.044537962 0.940098899 1.055160441 0.364501154 0.059888839 0.295272983 26.4283865 0.040406566 0.015138702 6.60E-09 8.180685796 0.115061542 LEAHSDWVR ddPTM_A459_MK2206_30min_R1 1 LEAHSDWVR 9 0 P55735;A8MXL6;P55735-2;P55735-4;P55735-3 P55735 SEC13 Protein SEC13 homolog 0 164.46 0.0013697 3967000 4466.2 4228.6 4705.1 3652.6 4545.4 4495.9 5488.8 4044.5 5064 5665.5 FALSE TRUE 4086.326237 3953.317371 4385.730921 3933.923885 4364.347093 4750.453973 5122.652167 4009.139363 5590.420922 6367.384912 0.641758947 0.620869859 0.688780556 0.617824105 0.685422219 0.746060437 0.804514292 0.629636722 0.877977537 1 12.63648526 -9.717144973 0.208437744 1.176043981 0.584023987 0.762131655 0.059058032 4.969717431 0.349698852 0.753492665 0.17544829 1.92E-10 9.717144973 -0.592019994 LEAHSDWVR ddPTM_A459_MK2206_30min_R2 2 LEAHSDWVR 9 0 P55735;A8MXL6;P55735-2;P55735-4;P55735-3 P55735 SEC13 Protein SEC13 homolog 0 ; 152.06 0.0016117 5642500 68408 63950 68430 80396 70431 68371 78722 62605 65194 80705 FALSE TRUE 73645.36908 60774.33599 70711.42205 73827.38963 67665.52505 70972.90631 68385.70684 70787.68846 70864.45628 78071.60246 0.943305463 0.778443558 0.905725255 0.945636919 0.866711108 0.909074543 0.87593574 0.906702133 0.907685433 1 16.25251026 -14.52287875 0.20604259 1.514140585 0.875131843 0.346343641 0.04464051 159.7075314 1.583599212 33.81210018 0.097527591 3.00E-15 14.52287875 -0.639008742 LEAIIT(ph)PPPAK ddPTM_A459_MK2206_30min_R2 1 LEAIITPPPAK 11 0 D6RCF2;O75367-2;O75367-3;O75367 D6RCF2 H2AFY Histone H2A;Core histone macro-H2A.1 1 LEAIIT(1)PPPAK 101.53 0.035499 7183300 97845 89708 78878 82805 78644 73645 91537 65389 68719 95445 TRUE FALSE 105336.0884 85253.23117 81507.75315 76039.56662 75556.04141 76447.61208 79518.08194 73935.56681 74696.0544 92330.63747 1.140857372 0.923347152 0.882781224 0.823557258 0.81832037 0.827976652 0.861231809 0.800769591 0.809006159 1 16.49452183 -4.400201255 1.32188974 0.839719994 1.580708632 0.70941094 0.055218586 1.548947578 1.227146348 0.014861785 1.973839586 3.98E-05 4.400201255 0.740988637 LEAS(ph)IER ddPTM_A459_MK2206_30min_R1 2 LEASIER 7 0 Q9UBI6 Q9UBI6 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 1 LEAS(1)IER;LEAS(1)IER 93.649 0.025432 20629600 6683.9 5923.8 4760 5363.1 7190.8 6219 6627.3 6266.9 6050.1 5142.3 TRUE FALSE 6115.399206 5538.159543 4436.904462 5776.166891 6904.375209 6571.114406 6185.204909 6212.109154 6679.029545 5779.366946 1.058143437 0.958264044 0.767714614 0.999446297 1.194659428 1.136995534 1.070221871 1.074877095 1.155668018 1 12.49669576 -6.006141607 24.85913895 1.107884832 0.923149266 0.486324659 0.08271883 213.8626275 865651.4306 0.023912071 0.034145275 9.86E-07 6.006141607 -0.184735566 LEAS(ph)YSDSPPGEEDLLVHVAEGSK ddPTM_A459_MK2206_30min_R1 4 LEASYSDSPPGEEDLLVHVAEGSK 24 0 Q7Z3C6;C9JS65;C9JFV2;F2Z3I6;C9JX27;C9IYZ9;C9JKV7;C9JDK4;C9JXG2;Q7Z3C6-3 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 LEAS(0.995)YS(0.005)DSPPGEEDLLVHVAEGSK;LEAS(0.99)YS(0.01)DSPPGEEDLLVHVAEGSK;LEAS(0.821)YS(0.179)DSPPGEEDLLVHVAEGSK;LEAS(0.817)YS(0.181)DS(0.002)PPGEEDLLVHVAEGSK 221.8 1.05E-34 36929500 15326.9 16937.3 16266.8 12951.2 16883.1 12476.5 13819 14013.5 11658.6 12147.7 TRUE FALSE 14023.26667 15834.67869 15162.65494 13948.70367 16210.61038 13182.90865 12897.15972 13890.98145 12870.55319 13652.64879 1.027146226 1.159824657 1.110601699 1.021684794 1.187360096 0.96559348 0.944663554 1.017456881 0.942714736 1 13.73689326 -6.78663369 24.99861014 0.973337835 1.100664648 0.597733282 0.052187036 153.9038895 152707.258 0.017528953 0.015464979 1.63E-07 6.78663369 0.127326813 LEAS(ph)YSDSPPGEEDLLVHVAEGSK ddPTM_A459_MK2206_30min_R2 1 LEASYSDSPPGEEDLLVHVAEGSK 24 0 Q7Z3C6;C9JS65;C9JFV2;F2Z3I6;C9JX27;C9IYZ9;C9JKV7;C9JDK4;C9JXG2;Q7Z3C6-3 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 LEAS(0.483)Y(0.013)S(0.483)DS(0.021)PPGEEDLLVHVAEGSK 79.993 0.00017537 3521600 21342 23693 22186 28923 27439 23290 25292 19152 19780 21136 TRUE FALSE 22975.95993 22516.44007 22925.67017 26559.89838 26361.60699 24176.31727 21971.13002 21655.23216 21500.42865 20446.33405 1.123720266 1.101245828 1.121260668 1.299005402 1.289307263 1.18242797 1.074575519 1.059125421 1.05155421 1 14.31955458 -7.329949343 3.451825567 1.045520113 1.18977602 0.537364808 0.064088483 0.238302495 5.597075459 0.03341804 0.02194614 4.68E-08 7.329949343 0.144255908 LEASDCDHQQNS(ph)PTLERPGR ddPTM_A459_MK2206_30min_R2 1 LEASDCDHQQNSPTLERPGR 20 1 B1AN62;Q9HAN9 B1AN62 NMNAT1 Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1 1 LEAS(0.002)DCDHQQNS(0.994)PT(0.004)LERPGR 58.5 0.019401 7959800 23941 23089 35919 33059 30318 35190 40735 39984 36120 47421 TRUE FALSE 25773.94137 21942.43383 37116.52153 30357.97395 29127.56298 36529.18011 35386.44557 45210.04609 39261.65231 45873.65665 0.561846237 0.478323191 0.809103181 0.661773579 0.634951846 0.796299723 0.771389249 0.985533951 0.855864894 1 15.48537829 -6.351538473 0.276966314 1.033949104 0.395282384 0.726615219 0.08514864 1.909609613 0.252334075 0.128855952 0.406841266 4.45E-07 6.351538473 -0.638666721 LEASYSDS(ph)PPGEEDLLVHVAEGSK ddPTM_A459_MK2206_30min_R1 2 LEASYSDSPPGEEDLLVHVAEGSK 24 0 Q7Z3C6;C9JS65;C9JFV2;F2Z3I6;C9JX27;C9IYZ9;C9JKV7;C9JDK4;C9JXG2;Q7Z3C6-3 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 LEAS(0.148)YS(0.148)DS(0.705)PPGEEDLLVHVAEGSK;LEAS(0.068)Y(0.001)S(0.259)DS(0.672)PPGEEDLLVHVAEGSK 168.69 5.17E-16 21013100 7236.1 6936.1 7392.4 6487.2 8633 6783.2 7753.8 8140.2 7611.5 7584.5 TRUE FALSE 6620.631697 6484.558629 6890.624484 6986.845268 8289.129329 7167.258922 7236.55815 8069.03109 8402.742663 8524.12512 0.776693397 0.760730109 0.808367356 0.81965541 0.972431682 0.840820474 0.84895025 0.946611057 0.985760127 1 13.05733605 -4.947076396 0.198458835 1.029139848 0.533153159 0.723515893 0.045408053 7.800858807 0.311206396 0.113571255 0.9753974 1.13E-05 4.947076396 -0.495986688 LEAVSHTSDMHR ddPTM_A459_MK2206_30min_R1 2 LEAVSHTSDMHR 12 0 Q01518-2;Q01518;Q5T0R7;Q5T0R6;Q5T0R5;Q5T0R4;Q5T0R3;Q5T0R2;Q5T0R1;Q5T0R9;Q5T0R8;Q5T0S3 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein 0 ; 150.06 0.00031559 8550100 5971.2 4184 4371.3 3820.8 10284.1 9984.4 8219 5494.6 3886.5 3373 FALSE TRUE 5463.318084 3911.62084 4074.588335 4115.078678 9874.46252 10549.7081 7670.725506 5446.561291 4290.515583 3790.872705 1.441176876 1.031852332 1.074841772 1.08552278 2.604799287 2.782923332 2.023472193 1.436756577 1.131801545 1 11.8883143 -6.219472523 24.78824176 1.90912076 1.14334791 0.256670652 0.549872711 607.7332925 358964.8549 0.175800339 0.226955126 6.03E-07 6.219472523 -0.76577285 LECGGGPWGNK ddPTM_A459_MK2206_30min_R2 2 LECGGGPWGNK 11 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 173.39 0.0026667 44391000 50844 62858 58906 63800 53172 46655 52761 43282 56591 53417 FALSE TRUE 54736.65573 59736.56312 60869.89664 58587.33591 51084.20011 48430.48872 45833.41732 48939.10601 61513.18289 51674.00766 1.059268638 1.156027292 1.177959663 1.133787344 0.988585992 0.937231132 0.886972375 0.94707394 1.190408595 1 15.65715116 -6.26633897 5.93022211 0.980602889 1.137367635 0.418564142 0.080171612 0.149634893 23.05042335 0.025402416 0.030609036 5.42E-07 6.26633897 0.156764746 LEDLDT(ph)CMMTPK ddPTM_A459_MK2206_30min_R1 1 LEDLDTCMMTPK 12 0 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 LEDLDT(0.782)CMMT(0.218)PK 151.16 0.0012392 23320000 5199.7 5840.4 5590.9 3992.3 3593.2 3217.3 4152.9 4722.2 5376.1 5248 TRUE FALSE 4757.43821 5460.188898 5211.405285 4299.787638 3450.075235 3399.460746 3875.867618 4680.914303 5934.964834 5898.16186 0.806596754 0.92574416 0.883564305 0.729004686 0.584940752 0.576359352 0.657131444 0.793622558 1.006239736 1 12.5260497 -10.42774958 8.680248042 1.000000005 0.76588178 0.20064822 0.134703128 2.09E-10 0 0.146487646 0.035528473 3.73E-11 10.42774958 -0.234118225 LEDLDTCMMT(ph)PK ddPTM_A459_MK2206_30min_R1 3 LEDLDTCMMTPK 12 0 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 LEDLDT(0.002)CMMT(0.998)PK;LEDLDT(0.002)CMMT(0.998)PK;LEDLDT(0.002)CMMT(0.998)PK 163.27 0.00099611 62277000 8774.9 10678.8 10072.1 7455.9 6569.5 5827.5 7639.3 7829.5 9225.6 9895.4 TRUE FALSE 8028.548676 9983.608179 9388.433914 8030.15471 6307.822904 6157.448014 7129.696236 7761.047507 10184.63413 11121.31686 0.721906297 0.897700183 0.844183655 0.722050708 0.567183094 0.553661773 0.641083815 0.697853285 0.915775916 1 13.44104001 -10.2365193 10.48960262 1 0.723762138 0.315834174 0.119410868 0 0 0.129267478 0.031351969 5.80E-11 10.2365193 -0.276237862 LEDLDTCMMT(ph)PK ddPTM_A459_MK2206_30min_R2 5 LEDLDTCMMTPK 12 0 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 LEDLDTCMMT(1)PK;LEDLDT(0.003)CMMT(0.997)PK;LEDLDT(0.027)CMMT(0.973)PK;LEDLDT(0.005)CMMT(0.995)PK;LEDLDTCMMT(1)PK 156.2 0.0010128 30704500 182726 184712 182567 182059 149410.9 132842.8 172866 130171.6 120943.4 180550 TRUE FALSE 196715.6431 175539.4707 188653.6927 167184.1973 143544.2773 137898.2258 150168.4866 147185.4751 131462.8383 174658.6683 1.126286173 1.005042993 1.080127855 0.957205268 0.821856016 0.789529814 0.859782615 0.842703523 0.752684305 1 17.41417872 -6.024230742 2.848368438 0.834696119 1.064164625 0.693348165 0.06721706 0.139666257 2.281590529 0.019450636 0.028476389 9.46E-07 6.024230742 0.229468506 LEDNDSAAS(ph)DPDAETTAR ddPTM_A459_MK2206_30min_R2 1 LEDNDSAASDPDAETTAR 18 0 F8WF85;C9J6R3;C9J9X8;C9JCX6;C9JXA0;Q9BYV8-5;Q9BYV8-2;Q9BYV8 F8WF85 CEP41 Centrosomal protein of 41 kDa 1 LEDNDS(0.003)AAS(0.997)DPDAETTAR 216.9 3.47E-14 8618400 17772 21851 17956 22550 22763 20610 21597 17302 18305 18852 TRUE FALSE 19132.63798 20765.91111 18554.64408 20707.59287 21869.21025 21394.32799 18761.28796 19563.43081 19897.13581 18236.86078 1.049119046 1.138677942 1.017425329 1.13548012 1.199176246 1.173136553 1.028756439 1.072741139 1.091039519 1 14.15456979 -7.277543612 24.86844148 1.054196035 1.119536609 0.279712935 0.055233241 1228.109194 1896460.746 0.024508059 0.016585335 5.28E-08 7.277543612 0.065340574 LEDNPSSGS(ph)PPR ddPTM_A459_MK2206_30min_R1 1 LEDNPSSGSPPR 12 0 Q05D32;H0YMH7;Q05D32-2 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 LEDNPS(0.006)S(0.053)GS(0.941)PPR 81.789 0.03757 3916200 1430.8 1398.6 1244.1 1367.8 1418.1 1354 1454.9 1468.2 1042.5 1074 TRUE FALSE 1309.102947 1307.550886 1159.653958 1473.148193 1361.614074 1430.66231 1357.846276 1455.363682 1150.871606 1207.055228 1.084542708 1.083256884 0.960729825 1.220448045 1.128046209 1.185250083 1.124924729 1.205714244 0.953453975 1 10.23727597 -5.759223932 24.99999227 1.129060291 1.04688454 0.121706539 0.086637672 106.0068098 1196184.972 0.022808211 0.037193547 1.74E-06 5.759223932 -0.082175751 LEDNPSSGS(ph)PPR ddPTM_A459_MK2206_30min_R2 4 LEDNPSSGSPPR 12 0 Q05D32;H0YMH7;Q05D32-2 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 LEDNPSS(0.001)GS(0.999)PPR;LEDNPS(0.008)S(0.046)GS(0.946)PPR;LEDNPS(0.007)S(0.022)GS(0.971)PPR;LEDNPS(0.026)S(0.085)GS(0.889)PPR 155.39 0.00042549 14432800 101892 103024 95880 117751 119064 95091 110999 86178 100980 127116 TRUE FALSE 109692.9299 97907.97797 99076.59135 108130.3666 114388.9491 98709.75464 96424.69797 97441.76049 109763.0579 122968.2153 0.892042952 0.79620557 0.805708947 0.879335903 0.930231839 0.802725764 0.784143266 0.792414204 0.892613246 1 16.90792593 -8.573277801 5.342059854 0.999979503 0.835131712 0.535181677 0.04701586 0.262264152 24.53182172 0.048691539 0.012645723 2.67E-09 8.573277801 -0.164847791 LEDTENWLYEDGEDQPK ddPTM_A459_MK2206_30min_R2 2 LEDTENWLYEDGEDQPK 17 0 A0A087WYC1;P34932 A0A087WYC1 HSPA4 Heat shock 70 kDa protein 4 0 ; 194.48 1.19E-19 0 32088 47342 36640 38498 39949 20299.8 37456 34042 36246 44592 FALSE TRUE 34544.68195 44991.06512 37861.55931 35352.59025 38380.40153 21072.32311 32537.98221 38491.40628 39398.61156 43136.96669 0.800813887 1.04298166 0.877705648 0.819542795 0.889733435 0.488498027 0.754294627 0.892306744 0.913337552 1 15.39663711 -5.687157441 3.031430149 0.802419175 0.929018213 0.06199388 0.140696019 0.566364963 10.44680665 0.04158056 0.0770096 2.06E-06 5.687157441 0.126599038 LEDVKNS(ph)PTFK ddPTM_A459_MK2206_30min_R1 2 LEDVKNSPTFK 11 1 H0YC42;P55327-2;P55327;P55327-3 H0YC42 TPD52 Tumor protein D52 1 LEDVKNS(0.994)PT(0.006)FK;LEDVKNS(0.913)PT(0.087)FK 134.21 0.0079442 26461000 7942 7120.9 5667.6 4327.2 3592 2949.6 4065.3 3724.6 3991.4 4521.5 TRUE FALSE 7266.491195 6657.328116 5282.899103 4660.481694 3448.923034 3116.603803 3794.111255 3692.036215 4406.320313 5081.657556 1.429945075 1.310070197 1.039601556 0.917118409 0.678700404 0.61330457 0.746628676 0.726541719 0.867102961 1 12.31108344 -5.446275191 1.387559264 0.752079466 1.446723962 0.832167435 0.104752902 0.190306929 0.64714287 0.033141824 0.130520719 3.58E-06 5.446275191 0.694644496 LEEEPSASS(ph)PQYACDFNLFLEDSADNR ddPTM_A459_MK2206_30min_R1 4 LEEEPSASSPQYACDFNLFLEDSADNR 27 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 LEEEPS(0.012)AS(0.398)S(0.589)PQYACDFNLFLEDSADNR;LEEEPS(0.01)AS(0.176)S(0.806)PQY(0.009)ACDFNLFLEDSADNR;LEEEPS(0.005)AS(0.152)S(0.842)PQYACDFNLFLEDSADNR;LEEEPS(0.018)AS(0.236)S(0.745)PQY(0.001)ACDFNLFLEDSADNR 195.97 6.21E-40 25938700 4346.41 4095.79 4247.85 3444.94 3638.39 3417.75 5169.74 3171.59 4126.01 3926.26 TRUE FALSE 3976.725006 3829.153327 3959.517777 3710.269876 3493.465222 3611.260051 4824.876077 3143.861123 4554.923505 4412.674731 0.901205108 0.867762425 0.897305607 0.840821067 0.791688814 0.818383469 1.093413037 0.71246156 1.032236406 1 12.10743769 -8.328219492 24.99992139 1.016118979 0.869282574 0.295038792 0.093045779 269.0554533 100720.9279 0.085588856 0.02209895 4.70E-09 8.328219492 -0.146836405 LEEEQHALFAR ddPTM_A459_MK2206_30min_R1 1 LEEEQHALFAR 11 0 Q70UQ0-4 Q70UQ0-4 0 100.69 0.022506 2225100 1813.1 1911 2317.3 1949.4 2127.5 2089.3 2143.9 1750.1 1982.5 2513 FALSE TRUE 1658.886324 1786.593553 2160.008132 2099.543126 2042.75717 2207.59436 2000.884343 1734.79906 2188.587969 2824.329412 0.587355822 0.632572654 0.764786191 0.743377567 0.723271571 0.781634873 0.708445812 0.614233967 0.774905349 1 11.46369265 -14.52287875 0.291755215 3.318576799 0.688374426 0.665816179 0.064016173 165.5656861 1.554086918 233.8875008 0.072708396 3.00E-15 14.52287875 -2.630202373 LEEFS(ph)PR ddPTM_A459_MK2206_30min_R2 1 LEEFSPR 7 0 Q9UGU0-2;Q9UGU0;I3L1M7 Q9UGU0-2 TCF20 Transcription factor 20 1 LEEFS(1)PR 80.219 0.0453 2192700 18120 16958 17314 19737 16031 19896 14134 13051 14850 17488 TRUE FALSE 19507.28113 16115.89038 17891.24012 18124.42396 15401.54239 20653.15622 12278.18882 14756.81051 16141.62616 16917.36799 1.153091967 0.952623977 1.057566409 1.071350104 0.91039826 1.220825617 0.725774176 0.872287611 0.954145241 1 14.04621751 -7.265426957 24.99993089 0.877409068 1.049523078 0.383671496 0.106439522 365.8218383 2293488.787 0.041431524 0.029110735 5.43E-08 7.265426957 0.17211401 LEEGVAS(ph)DEEAEEAQPGSGPSPEPEGSPPAHPQ ddPTM_A459_MK2206_30min_R2 2 LEEGVASDEEAEEAQPGSGPSPEPEGSPPAHPQ 33 0 Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-4;A1L2Z2 Q7Z406 MYH14 Myosin-14 1 LEEGVAS(1)DEEAEEAQPGSGPSPEPEGSPPAHPQ;LEEGVAS(0.998)DEEAEEAQPGS(0.002)GPSPEPEGSPPAHPQ 124.93 7.27E-25 13237400 24401.6 27940 23041.2 36837 32023 31710 36845 29666 31045 29963 TRUE FALSE 26269.80526 26552.54023 23809.38211 33827.29926 30765.61612 32916.74627 32007.20724 33543.44806 33745.23798 28985.30976 0.906314456 0.916068879 0.821429279 1.167049776 1.061420988 1.135635484 1.104256173 1.157256843 1.164218642 1 14.82303428 -5.763544932 24.99998215 1.117836814 0.884750652 0.794044509 0.053992682 21.77840225 258588.025 0.014315063 0.022471008 1.72E-06 5.763544932 -0.233086162 LEEPEEPKVLT(ph)PEEQLADK ddPTM_A459_MK2206_30min_R1 2 LEEPEEPKVLTPEEQLADK 19 1 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 LEEPEEPKVLT(1)PEEQLADK;LEEPEEPKVLT(1)PEEQLADK 87.319 0.0046813 8398600 1787.57 2132.98 2211.5 1878.18 1870.62 1337.32 1917.71 1998.2 1640.52 1062.82 TRUE FALSE 1635.527785 1994.122614 2061.389542 2022.837749 1796.109244 1413.037903 1789.783065 1980.729948 1811.057925 1194.490165 1.369226664 1.6694341 1.725748442 1.693473758 1.50366181 1.182963195 1.498365677 1.658222064 1.516176505 1 10.22217926 -6.518346226 24.85224818 1.411688623 1.622872959 0.243946239 0.195725428 303.5251867 1664272.014 0.064462271 0.066085058 3.03E-07 6.518346226 0.211184337 LEEPPELNRQS(ph)PNPR ddPTM_A459_MK2206_30min_R1 6 LEEPPELNRQSPNPR 15 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR 118.52 0.0014843 754502700 19678.3 19479.1 19163.6 14945.2 20377.3 17263.4 19603.7 17251.2 16340.7 14737.2 TRUE FALSE 18004.55725 18211.00705 17862.82822 16096.28189 19565.62899 18240.83879 18295.97294 17100.37458 18039.37424 16562.9556 1.087037706 1.099502256 1.078480717 0.97182425 1.181288501 1.101303368 1.104632131 1.032447046 1.089139806 1 14.01567252 -9.191472635 0.839457512 0.999478347 1.085593906 0.193552449 0.050723343 4.486886055 4.227545221 0.058375757 0.017007853 6.43E-10 9.191472635 0.086115559 LEEPPELNRQS(ph)PNPR ddPTM_A459_MK2206_30min_R2 3 LEEPPELNRQSPNPR 15 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR 92.906 0.007161 476243000 209678 250751 198089 283741 239207 257847 231292 204297 211498 222313 TRUE FALSE 225731.1089 238299.07 204693.1884 260558.4527 229814.5313 267659.5483 200923.0826 230999.3194 229893.7137 215058.945 1.049624366 1.108063977 0.951800393 1.211567613 1.068611823 1.244586912 0.934269823 1.074120955 1.068980013 1 17.71437261 -7.289765133 24.9948203 1.025519476 1.101945927 0.196957695 0.084865701 1405.487687 1240205.087 0.034876085 0.023518692 5.13E-08 7.289765133 0.07642645 LEEPTPAPS(ph)TSYSPQADSLR ddPTM_A459_MK2206_30min_R2 1 LEEPTPAPSTSYSPQADSLR 20 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 LEEPT(0.003)PAPS(0.367)T(0.367)S(0.256)YS(0.007)PQADSLR 159.18 1.14E-06 18579000 36244 38821 42379 47707 45988 38349 45676 31302 44961 39242 TRUE FALSE 39018.86851 36893.20559 43791.89471 43809.18549 44182.28005 39808.39807 39678.68633 35393.27888 48871.62651 37961.53675 1.027852712 0.971857536 1.153585931 1.154041412 1.163869638 1.048650857 1.045233932 0.932345787 1.287398527 1 15.21225078 -5.250475243 24.70924995 1.096411425 0.999855118 0.145958844 0.095024977 1224.975607 2760639.438 0.023982903 0.062051715 5.62E-06 5.250475243 -0.096556307 LEEPTPAPSTS(ph)YSPQADSLR ddPTM_A459_MK2206_30min_R1 1 LEEPTPAPSTSYSPQADSLR 20 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 LEEPTPAPS(0.059)T(0.021)S(0.678)YS(0.242)PQADSLR 281.36 5.34E-72 255790000 4837.4 4540.3 4193.2 3730.6 4468.2 4090.3 4885.2 3789.7 4003.9 3375.1 TRUE FALSE 4425.953728 4244.725645 3908.577267 4017.931458 4290.222132 4321.889251 4559.317222 3756.567052 4420.119733 3793.232869 1.166802535 1.119025853 1.03040794 1.059236698 1.131019972 1.139368291 1.201960802 0.990333887 1.165264535 1 11.88921223 -10.95280144 3.006507968 0.99791231 1.108282794 0.219598188 0.062791485 39215341.27 48988267.53 702418.9032 0.015449086 1.11E-11 10.95280144 0.110370484 LEEPTPAPSTS(ph)YSPQADSLR ddPTM_A459_MK2206_30min_R2 1 LEEPTPAPSTSYSPQADSLR 20 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 LEEPT(0.001)PAPS(0.197)T(0.197)S(0.487)Y(0.001)S(0.117)PQADSLR 174.15 4.75E-10 8023200 16318 18313 18383 24150 20606 20537 23572 17837 18864 20438 TRUE FALSE 17567.31863 17403.60305 18995.88004 22176.86775 19796.9049 21318.54993 20476.96808 20168.35714 20504.75662 19771.10973 0.888534779 0.880254234 0.960789774 1.121680475 1.00130469 1.078267746 1.035701504 1.020092317 1.037107016 1 14.27110623 -5.519608492 4.93608608 1.042816229 0.890427051 0.772125778 0.034500267 0.075218873 5.244844829 0.008951107 0.017393458 3.02E-06 5.519608492 -0.152389178 LEEPTPAPSTSYS(ph)PQADSLR ddPTM_A459_MK2206_30min_R1 4 LEEPTPAPSTSYSPQADSLR 20 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 LEEPTPAPST(0.002)S(0.006)YS(0.992)PQADSLR;LEEPTPAPS(0.011)T(0.011)S(0.03)YS(0.949)PQADSLR;LEEPTPAPSTS(0.132)YS(0.867)PQADSLR;LEEPTPAPS(0.017)T(0.017)S(0.316)YS(0.65)PQADSLR 297.87 2.14E-100 75524700 9886.88 9506.71 8950.3 7904.44 9729.97 8619.7 9192.86 8550.49 8032.36 6661.75 TRUE FALSE 9045.948938 8887.821451 8342.778573 8513.241338 9342.404691 9107.739965 8579.621083 8475.733967 8867.352566 7487.057884 1.208211433 1.187091323 1.114293318 1.137060975 1.247807194 1.216464479 1.145926907 1.132051348 1.184357421 1 12.87018319 -10.86656956 3.094140439 0.998385466 1.173543787 0.629393018 0.040231187 20220524.23 25823499.6 296012.3942 0.010653283 1.36E-11 10.86656956 0.175158322 LEEPTPAPSTSYS(ph)PQADSLR ddPTM_A459_MK2206_30min_R2 4 LEEPTPAPSTSYSPQADSLR 20 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 LEEPTPAPS(0.006)T(0.006)S(0.037)Y(0.024)S(0.928)PQADSLR;LEEPTPAPS(0.001)T(0.001)S(0.006)YS(0.992)PQADSLR;LEEPTPAPS(0.116)T(0.116)S(0.245)Y(0.002)S(0.52)PQADSLR;LEEPTPAPS(0.001)T(0.001)S(0.008)YS(0.99)PQADSLR 290.67 9.64E-86 514513600 154447 180286 165433 194009 183765 189313 212354 133852 167664 164059 TRUE FALSE 166271.5811 171333.2594 170948.4537 178157.8441 176549.4628 196517.4389 184471.6647 151346.916 182247.1117 158705.7683 1.047671946 1.07956542 1.077140771 1.122566911 1.112432552 1.238250134 1.162350094 0.953632106 1.148333256 1 17.27599504 -8.711185548 0.916615422 1.005507773 1.112028467 0.141298808 0.072235264 1.653641085 2.837300703 0.072525421 0.024479272 1.94E-09 8.711185548 0.106520694 LEETDRR ddPTM_A459_MK2206_30min_R2 1 LEETDRR 7 1 A0A0U1RQL2;C9J165;A0A0U1RQT0;A0A1B0GVU9;P47897-2;P47897;A0A0U1RRJ7;A0A0U1RQJ6;A0A0U1RR66;B4DDN1 A0A0U1RQL2 QARS Glutamine--tRNA ligase 0 101.21 0.027154 4038800 18118 14627 15315 15898 18717 12814 16087 21710 22672 18725 FALSE TRUE 19505.12801 13900.64445 15825.59446 14599.08254 17982.07653 13301.64575 13974.75758 24547.57154 24643.96958 18114.00478 1.076798215 0.767397636 0.87366624 0.805955542 0.992716782 0.734329372 0.771489118 1.355170866 1.360492606 1 14.14481792 -7.761198885 24.99999833 1.268373866 0.855427836 0.612650276 0.137163179 3.728164861 387698.7138 0.066224787 0.035134503 1.73E-08 7.761198885 -0.412946029 LEFQQQLGEAPSDAS(ph)P ddPTM_A459_MK2206_30min_R1 2 LEFQQQLGEAPSDASP 16 0 Q9BUW7 Q9BUW7 C9orf16 UPF0184 protein C9orf16 1 LEFQQQLGEAPS(0.026)DAS(0.974)P;LEFQQQLGEAPS(0.003)DAS(0.997)P 106.3 0.0035174 8494200 1746.36 1653.94 2071.15 1693.57 1805.17 1934.89 1677.86 1929.94 1693.16 1596.69 TRUE FALSE 1597.822911 1546.268205 1930.566109 1824.009055 1733.266256 2044.4418 1565.933021 1913.066738 1869.170041 1794.500012 0.890400056 0.861670769 1.07582396 1.016444159 0.965876983 1.139282132 0.872629151 1.066072291 1.041610493 1 10.80936622 -5.251491646 24.86896676 1.021197222 0.876035391 0.429651247 0.067361714 573.9863337 1434936.957 0.016346234 0.042132252 5.60E-06 5.251491646 -0.145161831 LEGDSDDLLEDS(ph)DSEEHSR ddPTM_A459_MK2206_30min_R1 2 LEGDSDDLLEDSDSEEHSR 19 0 Q9NR09;A0A3B3IUB9 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 1 LEGDSDDLLEDS(0.998)DS(0.002)EEHSR;LEGDSDDLLEDS(1)DSEEHSR 221.81 2.18E-19 42946000 6140.2 4893.4 4464.8 3215.9 6891.6 6371.2 6886.7 5559.7 4601.3 4508.3 TRUE FALSE 5617.943747 4574.838771 4161.741816 3463.589175 6617.092979 6731.931838 6427.300808 5511.092129 5079.621601 5066.82224 1.108770642 0.902900981 0.821371191 0.683582137 1.305965093 1.328629962 1.268507262 1.087682154 1.002526112 1 12.3068655 -6.269566262 24.99923721 1.183237558 0.876724785 0.477023154 0.146196449 543.948074 1673244.765 0.048188716 0.055589666 5.38E-07 6.269566262 -0.306512773 LEGDSDDLLEDS(ph)DSEEHSR ddPTM_A459_MK2206_30min_R2 5 LEGDSDDLLEDSDSEEHSR 19 0 Q9NR09;A0A3B3IUB9 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 1 LEGDSDDLLEDS(1)DSEEHSR;LEGDSDDLLEDS(1)DSEEHSR;LEGDSDDLLEDS(0.928)DS(0.071)EEHS(0.002)R;LEGDSDDLLEDS(0.886)DS(0.096)EEHS(0.018)R;LEGDSDDLLEDS(0.782)DS(0.217)EEHS(0.001)R 194.56 2.18E-15 126545000 248536.6 315306.1 280819.7 353952.6 345744.9 320435.8 340779.8 252823 281626.3 284323.2 TRUE FALSE 267564.7532 299648.4576 290182.0886 325033.5403 332169.218 332630.2089 296035.0029 285867.8342 306121.6465 275045.7573 0.972800874 1.089449481 1.055032048 1.181743516 1.207687118 1.20936317 1.076311832 1.03934646 1.112984434 1 18.06931212 -4.495035755 1.365809403 1.12134364 0.815560454 0.262141423 0.067992952 3.526526189 3.567740849 0.021046409 1.798058725 3.20E-05 4.495035755 -0.305783187 LEGEVT(ph)PNSLSTSYK ddPTM_A459_MK2206_30min_R1 1 LEGEVTPNSLSTSYK 15 0 A0A0A0MQZ8;Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;H0Y7Y3 A0A0A0MQZ8;Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 LEGEVT(0.905)PNS(0.083)LS(0.011)TSYK 147.75 0.00074349 5204900 1884.6 1630.3 1596.3 1627.5 1781.6 1435.3 1693.8 1522.1 1402.4 1408.8 TRUE FALSE 1724.304874 1524.167174 1487.947604 1752.850332 1710.635099 1516.565446 1580.809693 1508.79244 1548.184499 1583.33278 1.089035038 0.962632236 0.93975671 1.107063755 1.080401493 0.957831143 0.998406471 0.952921874 0.977801078 1 10.62874879 -6.784914335 24.99962929 0.97576312 1.030340047 0.239325315 0.051550999 409.1661112 435737.57 0.019436014 0.017149954 1.64E-07 6.784914335 0.054576927 LEGEVT(ph)PNSLSTSYK ddPTM_A459_MK2206_30min_R2 1 LEGEVTPNSLSTSYK 15 0 A0A0A0MQZ8;Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;H0Y7Y3 A0A0A0MQZ8;Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 LEGEVT(0.995)PNS(0.005)LSTSYK 165.89 0.00019477 4946600 25304 26510 24093 25239 29018 22346 25687 21684 20431 25944 TRUE FALSE 27241.2937 25193.55195 24896.2486 23176.89296 27878.60752 23196.39269 22314.26604 24518.17325 22208.05145 25097.4494 1.085420803 1.003829176 0.991983217 0.923476031 1.110814373 0.924252991 0.889104932 0.976918923 0.884872845 1 14.61525313 -6.871994602 21.35295077 0.930700656 1.015080502 0.358348166 0.058289546 3.808240879 717.0425232 0.019956167 0.017599707 1.34E-07 6.871994602 0.084379846 LEGPVS(ph)PDVEPGKEETEESK ddPTM_A459_MK2206_30min_R1 4 LEGPVSPDVEPGKEETEESK 20 1 O14686;O14686-3;A0A3B3ISC8 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 LEGPVS(1)PDVEPGKEETEESK;LEGPVS(1)PDVEPGKEETEESK;LEGPVS(1)PDVEPGKEETEESK;LEGPVS(1)PDVEPGKEETEESK 133.68 7.14E-05 135377000 16669.2 20369.6 21122.6 17084.8 12103.5 10859.52 14843.8 16282.5 17662.5 17255 TRUE FALSE 15251.39701 19043.53534 19688.85676 18400.67426 11621.39197 11474.37664 13853.59719 16140.14382 19498.58008 19392.67967 0.786451242 0.981996076 1.015272623 0.948846398 0.599266948 0.591685978 0.714372507 0.832280226 1.005460845 1 14.24322455 -6.202411202 24.93454035 0.768376725 0.942497897 0.179653372 0.14419543 385.7773716 162958.5783 0.044873477 0.057931392 6.27E-07 6.202411202 0.174121171 LEGPVS(ph)PDVEPGKEETEESK ddPTM_A459_MK2206_30min_R2 4 LEGPVSPDVEPGKEETEESK 20 1 O14686;O14686-3;A0A3B3ISC8 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 LEGPVS(1)PDVEPGKEETEESK;LEGPVS(1)PDVEPGKEETEESK;LEGPVS(1)PDVEPGKEETEESK;LEGPVS(1)PDVEPGKEETEESK 124.08 0.00012954 152750000 335854 328750 357158 272599 301714 186982 372997 281336 236061 370802 TRUE FALSE 361567.2405 312424.753 369065.4695 250326.7897 289867.1924 194097.731 324022.0459 318107.5812 256593.1591 358702.7611 1.007985663 0.87098508 1.028889402 0.697866916 0.808098581 0.541110223 0.903316286 0.886827802 0.715336448 1 18.45242932 -5.758294608 24.99998423 0.783209234 0.959456559 0.288255639 0.125811542 103.6283697 823796.6933 0.033992301 0.05584639 1.74E-06 5.758294608 0.176247324 LEGQATAVT(ph)PNK ddPTM_A459_MK2206_30min_R2 1 LEGQATAVTPNK 12 0 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 LEGQAT(0.002)AVT(0.998)PNK 98.943 0.029737 0 39032 28921 23328 25414 26183 20483 33652 25847 16708 38845 TRUE FALSE 42020.31993 27484.8252 24105.74388 23337.5949 25154.92386 21262.49492 29233.45198 29225.29165 18161.23164 37577.49083 1.118231127 0.731417255 0.641494239 0.621052507 0.669414676 0.56583062 0.777951144 0.777733984 0.483300807 1 15.19758112 -4.763041467 3.95281475 0.679525859 1.16740482 0.472970729 0.133594213 0.202690314 5.839622523 0.0312247 0.293424075 1.73E-05 4.763041467 0.487878961 LEGQGDVPT(ph)PK ddPTM_A459_MK2206_30min_R2 1 LEGQGDVPTPK 11 0 Q9Y2Z0-2;Q9Y2Z0 Q9Y2Z0-2 SUGT1 Suppressor of G2 allele of SKP1 homolog 1 LEGQGDVPT(1)PK 106.29 0.026201 8998800 83134 66976 76711 65392 54243 43227 55055 37858 45625 60274 TRUE FALSE 89498.80296 63650.06923 79268.50645 60049.26442 52113.14727 44872.03378 47826.21237 42806.17059 49593.38003 58307.26432 1.534951159 1.091631891 1.359496237 1.029876211 0.893767661 0.769578788 0.820244491 0.734148156 0.850552339 1 15.83138801 -6.001338878 1.771922775 0.81744918 1.322009398 0.752459459 0.123253317 0.163055703 1.03058437 0.038343776 0.063024571 9.97E-07 6.001338878 0.504560218 LEGVDGGQS(ph)PR ddPTM_A459_MK2206_30min_R2 4 LEGVDGGQSPR 11 0 O00418;H3BRH4 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 LEGVDGGQS(1)PR;LEGVDGGQS(1)PR;LEGVDGGQS(1)PR;LEGVDGGQS(1)PR 140.33 0.0010954 193138000 231857 366677 263204 424614 365296 563456 311925 287966 379660 270359 TRUE FALSE 249608.1502 348468.3534 271979.09 389921.6779 350952.6436 584898.7129 270968.8728 325604.1449 412682.1405 261537.208 0.954388678 1.332385384 1.039925034 1.49088415 1.341884187 2.236388151 1.036062421 1.244962992 1.577909865 1 17.99665668 -5.766388491 24.85147231 1.443482238 1.13124825 0.145962145 0.337859801 216.1167492 1085216.727 0.094291281 0.145000659 1.71E-06 5.766388491 -0.312233987 LEIS(ph)PHR ddPTM_A459_MK2206_30min_R2 1 LEISPHR 7 0 Q96QB1-6;Q96QB1-4;Q96QB1-1;Q96QB1 Q96QB1-6 DLC1 Rho GTPase-activating protein 7 1 LEIS(1)PHR 78.113 0.036291 0 7793.7 11329 8905.9 10348 12344 11067 10107 7654.3 10458 9425 TRUE FALSE 8390.391664 10766.41833 9202.818261 9502.535298 11859.31254 11488.16244 8779.938759 8654.743291 11367.61794 9117.463022 0.92025508 1.180856814 1.009361731 1.042234586 1.300725049 1.260017443 0.962980463 0.94924907 1.246796166 1 13.15441673 -4.746316246 24.71105054 1.105663503 0.920254507 0.165061025 0.125192884 1458.055031 2382294.458 0.032406223 0.740819709 1.79E-05 4.746316246 -0.185408996 LEKHELIEFR ddPTM_A459_MK2206_30min_R1 1 LEKHELIEFR 10 1 A0A087WVQ6;Q00610-2;Q00610;J3KS13;K7EJJ5 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 85.807 0.028629 6546300 6299.3 6148.7 7471 6980.4 7088.6 6434.2 6115.4 6634 4390.8 3292.4 FALSE TRUE 5763.511456 5748.418512 6963.889335 7518.031617 6806.246052 6798.498844 5707.452824 6575.999637 4847.239373 3700.287368 1.557584826 1.553505969 1.881986084 2.031742638 1.8393831 1.837289423 1.542435021 1.777159172 1.309962954 1 11.8534216 -8.466645879 1.741510982 0.993997893 1.769144785 0.718076316 0.154924444 0.202927406 1.351542187 0.161452469 0.046492978 3.41E-09 8.466645879 0.775146892 LEKPETQSS(ph)PITVQSSK ddPTM_A459_MK2206_30min_R1 1 LEKPETQSSPITVQSSK 17 1 Q96CB8;A0A087WXN4;E9PGI3 Q96CB8 INTS12 Integrator complex subunit 12 1 LEKPETQS(0.014)S(0.595)PIT(0.36)VQS(0.024)S(0.008)K 112.82 0.0010348 32161000 6692 7084.5 6796.8 6072.3 6028.2 5912.8 6464.6 5985.4 5909.8 4815.8 TRUE FALSE 6122.810259 6623.297762 6335.452153 6539.989598 5788.084029 6247.577626 6033.358329 5933.070279 6524.144858 5412.417661 1.131252361 1.223722591 1.170540145 1.208330548 1.069408237 1.154304419 1.114725194 1.096195942 1.205403069 1 12.40205746 -14.52287875 0.151823666 0.472293103 1.195917365 0.463598047 0.048715275 118.2226762 1.05595119 18.92486002 0.234993814 3.00E-15 14.52287875 0.723624262 LEKPETQSS(ph)PITVQSSK ddPTM_A459_MK2206_30min_R2 1 LEKPETQSSPITVQSSK 17 1 Q96CB8;A0A087WXN4;E9PGI3 Q96CB8 INTS12 Integrator complex subunit 12 1 LEKPETQS(0.017)S(0.505)PIT(0.478)VQSSK 121.14 0.00079155 40819000 135330 141340 148370 150550 148820 105290 152370 126560 100620 151470 TRUE FALSE 145690.9689 134321.2611 153316.5817 138249.5834 142976.579 109296.8847 132363.636 143101.8265 109371.7457 146527.5463 0.994290647 0.916696311 1.046332827 0.943505756 0.975765872 0.745913567 0.903336194 0.976620643 0.746424467 1 17.16081238 -6.62470201 23.22702735 0.873245517 0.974285788 0.266900504 0.083554869 9.591766862 2167.079673 0.026384893 0.026384895 2.37E-07 6.62470201 0.101040271 LEKPETQSSPIT(ph)VQSSK ddPTM_A459_MK2206_30min_R1 1 LEKPETQSSPITVQSSK 17 1 Q96CB8;A0A087WXN4;E9PGI3 Q96CB8 INTS12 Integrator complex subunit 12 1 LEKPETQS(0.01)S(0.367)PIT(0.623)VQSSK 129.2 0.0013239 29342000 5044.3 5029.5 5313.7 4914 5030.7 4381.8 4853.8 4639 4244.4 4173 TRUE FALSE 4615.255796 4702.078636 4953.020849 5292.477131 4830.316566 4629.893729 4530.011858 4598.441712 4685.620569 4689.982745 0.98406669 1.002579091 1.05608509 1.128464095 1.029922034 0.987187796 0.965890944 0.980481584 0.999069895 1 12.1953669 -6.712249886 4.571523611 0.983721096 1.044939756 0.348856249 0.036735473 0.24495109 10.83339553 0.013968147 0.013583869 1.94E-07 6.712249886 0.06121866 LEKVPDS(ph)PENELK ddPTM_A459_MK2206_30min_R2 1 LEKVPDSPENELK 13 1 A0A0U1RR46;A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35 A0A0U1RR46 INADL InaD-like protein 1 LEKVPDS(1)PENELK 124.99 0.0011955 6816200 43022 45489 41328 37954 50104 23500 48297 32613 31531 46784 TRUE FALSE 46315.7974 43230.08241 42705.85489 34853.03679 48136.66521 24394.30897 41955.54588 36875.63108 34273.50939 45257.44191 1.023385226 0.955203842 0.943620609 0.770106204 1.063618781 0.539012104 0.927041921 0.81479707 0.757301074 1 15.46586742 -5.299045846 0.958435159 0.823832897 1.048165406 0.162581331 0.138251765 1.77292621 2.197221178 0.048211441 0.348574857 5.02E-06 5.299045846 0.22433251 LELDGEKETAPEEPGS(ph)PAK ddPTM_A459_MK2206_30min_R1 1 LELDGEKETAPEEPGSPAK 19 1 P35612 P35612 ADD2 Beta-adducin 1 LELDGEKETAPEEPGS(1)PAK 101.48 0.00064764 6691100 2639 3080.9 2998.8 2807.7 2121.5 1503.2 2236.6 2090.5 2482.6 2880.6 TRUE FALSE 2414.539192 2880.33285 2795.249811 3023.94954 2036.996163 1588.309885 2087.400495 2072.222979 2740.675154 3237.470475 0.745810413 0.889686214 0.863405499 0.934046986 0.629193742 0.490602122 0.64476279 0.640074711 0.846548308 1 11.66065132 -6.266367636 24.95656385 0.676449229 0.860852791 0.198497197 0.13861753 524.4317217 2655704.6 0.041913918 0.049040812 5.42E-07 6.266367636 0.184403562 LELDGEKETAPEEPGS(ph)PAK ddPTM_A459_MK2206_30min_R2 2 LELDGEKETAPEEPGSPAK 19 1 P35612 P35612 ADD2 Beta-adducin 1 LELDGEKETAPEEPGS(1)PAK;LELDGEKETAPEEPGS(1)PAK 86.987 0.0019001 8742800 72679 66605 71847 60851 65122 43995 76034 55871 53630 79912 TRUE FALSE 78243.36012 63297.49255 74242.34312 55879.27865 62564.98307 45669.26055 66050.64447 63173.53153 58294.64046 77304.47798 1.012145249 0.81880758 0.960388648 0.722846594 0.809331939 0.590771217 0.854421971 0.817204038 0.75409138 1 16.23826437 -4.123525101 0.846886416 0.787072131 1.446530084 0.219202321 0.109906012 8.888887891 2.233380361 0.037372467 7.126107022 7.52E-05 4.123525101 0.659457953 LELKAS(ph)PNVEAPQPHR ddPTM_A459_MK2206_30min_R2 1 LELKASPNVEAPQPHR 16 1 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494BZW2 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 LELKAS(1)PNVEAPQPHR 59.68 0.032412 3201700 30362 39045 42534 41943 40036 37309 34545 33850 29593 39116 TRUE FALSE 32686.53806 37106.08208 43952.06233 38516.12273 38463.98548 38728.82014 30009.2 38274.31122 32166.94565 37839.64812 0.863817178 0.980613825 1.161534647 1.017877402 1.016499555 1.023498422 0.793062343 1.011486975 0.85008575 1 15.20761105 LELQGPRGS(ph)PNAR ddPTM_A459_MK2206_30min_R1 1 LELQGPRGSPNAR 13 1 P19338;H7BY16 P19338 NCL Nucleolin 1 LELQGPRGS(1)PNAR 113.54 0.021522 25294000 2327 2122.1 2370.4 4461.2 6143.5 1512.1 1166 5210.4 634.95 401.59 TRUE FALSE 2129.07643 1983.950904 2209.503852 4804.802397 5898.791386 1597.713795 1088.218267 5164.846022 700.9553247 451.342001 4.717213168 4.39567091 4.895409351 10.64559112 13.06944927 3.539918269 2.411072457 11.44330909 1.553046965 1 8.818077229 -8.41071021 8.888442421 1.010219929 6.807352768 0.297414361 3.45389813 0.416831955 28.69764717 3.509243412 0.906691262 3.88E-09 8.41071021 5.79713284 LELSSSAS(ph)PQEER ddPTM_A459_MK2206_30min_R1 4 LELSSSASPQEER 13 0 A0A075B6T1;Q9C0C7-4;Q9C0C7-2;Q9C0C7-3;Q9C0C7;Q9C0C7-5;Q9C0C7-6 A0A075B6T1 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 1 LELSS(0.001)S(0.006)AS(0.993)PQEER;LELSSS(0.001)AS(0.999)PQEER;LELSSS(0.004)AS(0.996)PQEER;LELSSS(0.001)AS(0.999)PQEER 219.95 1.30E-08 62083000 7354.4 7742.4 7550 7042.4 7965.5 7080 7962.4 7124.3 6358.9 5775.7 TRUE FALSE 6728.869661 7238.368353 7037.527036 7584.806868 7648.217268 7480.863482 7431.242824 7062.012996 7019.930411 6491.23732 1.036608173 1.1150984 1.084158025 1.168468582 1.178237197 1.152455705 1.144811452 1.087930182 1.081447198 1 12.66427779 -8.575749367 1.371628074 1.001446215 1.127299875 0.4616539 0.040397175 0.471282457 1.930954223 0.041371284 0.012419023 2.66E-09 8.575749367 0.12585366 LELSSSAS(ph)PQEER ddPTM_A459_MK2206_30min_R2 4 LELSSSASPQEER 13 0 A0A075B6T1;Q9C0C7-4;Q9C0C7-2;Q9C0C7-3;Q9C0C7;Q9C0C7-5;Q9C0C7-6 A0A075B6T1 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 1 LELSSS(0.005)AS(0.994)PQEER;LELS(0.009)S(0.046)S(0.062)AS(0.882)PQEER;LELSSS(0.005)AS(0.995)PQEER;LELSS(0.002)S(0.077)AS(0.921)PQEER 191.63 9.91E-05 62177000 114150 150559 141248 159785 157290 165105 166187 125406 141966 152162 TRUE FALSE 122889.4118 143082.459 145957.1378 146730.0544 151114.0043 171388.1865 144366.4473 141796.9948 154313.9461 147196.9664 0.834863753 0.972047607 0.991577078 0.996827978 1.02661086 1.164345915 0.980770534 0.963314654 1.048350043 1 17.16738841 -3.859280887 0.966173103 1.028183032 1.87E-10 0.541537608 0.052385735 8.135674509 1.604259209 0.017981549 13.32009359 0.000138267 3.859280887 -1.028183032 LENEGS(ph)DEDIETDVLYSPQMALK ddPTM_A459_MK2206_30min_R1 1 LENEGSDEDIETDVLYSPQMALK 23 0 O60502-3;O60502 O60502-3 MGEA5 Protein O-GlcNAcase 1 LENEGS(1)DEDIETDVLYSPQMALK 131.7 4.83E-06 5291500 3164.2 2973.9 3339.5 3084.5 3312.7 2697 3335.2 2895.7 3180.4 2627.9 TRUE FALSE 2895.068174 2780.298569 3112.824044 3322.068724 3180.748144 2849.701809 3112.714893 2870.3832 3511.013961 2953.464092 0.980227991 0.941368672 1.053956963 1.124804169 1.076955076 0.9648676 1.053920006 0.971870018 1.188778279 1 11.52819236 -5.268931362 24.06017201 1.053495477 0.96079833 0.249812007 0.064862562 421.7087081 1354306.223 0.016664013 0.035876395 5.38E-06 5.268931362 -0.092697147 LENS(ph)PLGEALR ddPTM_A459_MK2206_30min_R1 1 LENSPLGEALR 11 0 D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;D6RDK6;D6RBN5;Q9NX40-3;Q9NX40-2;Q9NX40-4;Q9NX40 D6RI08 OCIAD1 OCIA domain-containing protein 1 1 LENS(1)PLGEALR 111.88 0.0079946 24873000 2261 2255.5 2009.5 2111.4 2727.2 2168.6 2934.7 2647.7 2654 2398 TRUE FALSE 2068.690077 2108.66654 1873.100739 2274.020394 2618.569849 2291.384258 2738.931518 2624.551438 2929.892797 2695.082344 0.767579544 0.782412658 0.695006868 0.843766573 0.971610331 0.850209369 1.016270068 0.973829777 1.087125521 1 11.39611364 -6.491810044 0.734692704 1.029150618 0.735227122 0.781109309 0.056941197 0.326859819 0.392401114 0.037168644 0.049944636 3.22E-07 6.491810044 -0.293923495 LENS(ph)PLGEALR ddPTM_A459_MK2206_30min_R2 3 LENSPLGEALR 11 0 D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;D6RDK6;D6RBN5;Q9NX40-3;Q9NX40-2;Q9NX40-4;Q9NX40 D6RI08 OCIAD1 OCIA domain-containing protein 1 1 LENS(1)PLGEALR;LENS(1)PLGEALR;LENS(1)PLGEALR 123.68 0.0037932 23748100 96689 111032 117541 101560 89165 102535 121927 83409 83733 111928 TRUE FALSE 104091.5842 105518.3123 121459.7583 93262.22313 85663.93408 106437.0413 105917.8384 94310.84269 91015.94499 108275.7985 0.961355959 0.974532756 1.121762757 0.861339509 0.791164187 0.983017837 0.978222649 0.871024218 0.840593616 1 16.72435129 -5.785291179 24.99999901 0.899979778 1.01474882 0.33007704 0.075259891 268.4379184 281359.2623 0.022007619 0.032662027 1.64E-06 5.785291179 0.114769041 LENTS(ph)PMVK ddPTM_A459_MK2206_30min_R2 1 LENTSPMVK 9 0 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KS29;J3QKP0 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 LENT(0.463)S(0.537)PMVK 108.98 0.011693 4966000 62794 66435 57859 67818 63538 61249 76541 53691 54244 73374 TRUE FALSE 67601.55692 63135.93451 59787.99018 62277.05246 61043.17887 63579.87361 66491.07476 60708.59805 58962.04507 70979.81239 0.952405404 0.889491426 0.842323869 0.877391055 0.860007611 0.895745867 0.936760362 0.855293865 0.830687531 1 16.11512114 -6.955459391 24.85058438 0.89685907 0.881490886 0.025495972 0.050439841 700.7292285 390956.4106 0.017832799 0.01572704 1.11E-07 6.955459391 -0.015368183 LENTTPT(ph)QPLTPLHVVTQNGAEASSVK ddPTM_A459_MK2206_30min_R2 1 LENTTPTQPLTPLHVVTQNGAEASSVK 27 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 LENT(0.049)T(0.179)PT(0.661)QPLT(0.11)PLHVVTQNGAEASSVK 113.13 5.33E-10 6490200 24964 24540 24769 26948 26342 22589 24618 20683 18327 26467 TRUE FALSE 26875.26303 23321.37928 25594.7861 24746.2622 25307.68072 23448.64022 21385.62703 23386.33912 19921.04933 25603.38396 1.04967621 0.910870974 0.99966419 0.966523106 0.988450619 0.915841447 0.835265646 0.913408132 0.778063141 1 14.64404688 -6.929813132 3.917745793 0.874222514 0.978771515 0.37189761 0.062097742 0.223894041 6.843125712 0.021341194 0.018396357 1.18E-07 6.929813132 0.104549001 LENTTPTQPLT(ph)PLHVVTQNGAEASSVK ddPTM_A459_MK2206_30min_R2 2 LENTTPTQPLTPLHVVTQNGAEASSVK 27 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 LENT(0.019)T(0.052)PT(0.145)QPLT(0.785)PLHVVTQNGAEASSVK;LENT(0.001)T(0.002)PT(0.027)QPLT(0.971)PLHVVTQNGAEASSVK 119.87 1.09E-11 15051500 25452 32973 27788 34852 32623 29753 33611 22942 33184 34074 TRUE FALSE 27400.62469 31335.60877 28714.43805 32004.48011 31342.0571 30885.27126 29197.83533 25940.59817 36070.28434 32962.16817 0.83127495 0.95065375 0.87113317 0.970945842 0.950849378 0.936991496 0.885798385 0.786980942 1.094293438 1 15.00852352 -14.52287742 0.136630924 1.306436079 0.883918166 0.141377393 0.077556836 324.5098328 2.734029422 26.6194874 0.501647796 3.00E-15 14.52287742 -0.422517913 LENVSQLSLDKS(ph)PTEK ddPTM_A459_MK2206_30min_R1 1 LENVSQLSLDKSPTEK 16 1 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 LENVS(0.001)QLS(0.002)LDKS(0.887)PT(0.111)EK 83.395 0.010208 105510000 5956.5 6732.8 7389.5 5908.5 4182.9 3152.6 4769.1 5175.6 6110.6 6147.3 TRUE FALSE 5449.868396 6294.493496 6887.921328 6363.573694 4016.286236 3331.097488 4450.962041 5130.350275 6745.818737 6908.873934 0.788821514 0.911073723 0.996967291 0.921072487 0.581322843 0.482147673 0.644238422 0.742574018 0.976399165 1 12.75423487 -4.310480207 15.29125621 0.789281274 0.003924877 0 0.177636721 48688.29884 3605559.672 0.047631195 38496.72448 4.89E-05 4.310480207 -0.785356397 LENVSQLSLDKS(ph)PTEK ddPTM_A459_MK2206_30min_R2 1 LENVSQLSLDKSPTEK 16 1 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 LENVS(0.004)QLS(0.035)LDKS(0.814)PT(0.147)EK 92.913 0.0057292 97019000 93400 98392 94677 81486 86096 54591 99378 76468 61144 96905 TRUE FALSE 100550.7758 93505.99636 97833.48393 74828.33314 82715.43844 56668.49876 86329.54923 86462.63015 66462.1946 93742.99779 1.072621723 0.997471796 1.043635111 0.798228507 0.882363914 0.604509138 0.920917309 0.922336945 0.70898303 1 16.51642331 -5.75828324 24.99418513 0.826755983 1.03386582 0.424139602 0.108677391 75.77190157 600041.7963 0.029189659 0.047944522 1.74E-06 5.75828324 0.207109837 LEPAS(ph)PPEDTSAEVSR ddPTM_A459_MK2206_30min_R1 2 LEPASPPEDTSAEVSR 16 0 E9PFE2;Q9UHL9-2;Q9UHL9;Q9UHL9-3 E9PFE2 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 1 LEPAS(0.971)PPEDT(0.014)S(0.014)AEVSR;LEPAS(0.999)PPEDTSAEVSR 206.13 8.21E-08 16116700 6507 4841.4 5173.4 3774.91 7115 7775.7 6369.3 4492.3 5264.6 5127.3 TRUE FALSE 5953.54548 4526.22398 4822.244022 4065.654222 6831.594484 8215.953414 5944.415618 4453.024295 5811.87401 5762.508633 1.033151681 0.785460685 0.836830681 0.705535467 1.185524382 1.425759845 1.031567325 0.772757939 1.008566647 1 12.49248129 -6.264377175 24.99207236 1.075130676 0.836087637 0.299996784 0.172328695 367.4530567 3125949.884 0.058631779 0.06942018 5.44E-07 6.264377175 -0.239043039 LEPAS(ph)PPEDTSAEVSR ddPTM_A459_MK2206_30min_R2 3 LEPASPPEDTSAEVSR 16 0 E9PFE2;Q9UHL9-2;Q9UHL9;Q9UHL9-3 E9PFE2 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 1 LEPAS(0.887)PPEDT(0.006)S(0.106)AEVS(0.001)R;LEPAS(0.974)PPEDT(0.008)S(0.019)AEVSR;LEPAS(0.998)PPEDT(0.001)S(0.001)AEVSR 189.59 9.70E-07 24171900 55844 57029 52706 58475 53605 61939 58785 51260.6 49806 63987 TRUE FALSE 60119.45958 54197.02279 54463.19173 53697.40545 51500.19836 64296.13205 51066.45889 57960.53642 54138.03585 61899.10943 0.971249185 0.875570316 0.879870361 0.867498837 0.832002251 1.038724671 0.82499505 0.936371088 0.874617363 1 15.91763103 LEPGS(ph)DVEVK ddPTM_A459_MK2206_30min_R1 2 LEPGSDVEVK 10 0 Q9ULI0-2;Q9ULI0;H7BYF1 Q9ULI0-2 ATAD2B ATPase family AAA domain-containing protein 2B 1 LEPGS(1)DVEVK;LEPGS(1)DVEVK 158.01 0.00048252 22561000 6444.4 7904.6 7466.1 4423.7 4196.1 5616.7 8853.2 5244.5 11084.6 14607.1 TRUE FALSE 5896.269939 7390.009103 6959.321934 4764.41414 4028.960452 5934.7127 8262.619182 5198.647889 12236.88384 16416.73783 0.359162094 0.450150888 0.42391625 0.290216862 0.245417847 0.361503775 0.503304571 0.316667534 0.745390708 1 14.00287986 -8.456196112 2.950428071 0.997940882 0.370081877 0.887027189 0.074454552 0.075336817 1.376417245 0.076491715 0.02052319 3.50E-09 8.456196112 -0.627859005 down LEPGS(ph)DVEVK ddPTM_A459_MK2206_30min_R2 4 LEPGSDVEVK 10 0 Q9ULI0-2;Q9ULI0;H7BYF1 Q9ULI0-2 ATAD2B ATPase family AAA domain-containing protein 2B 1 LEPGS(1)DVEVK;LEPGS(1)DVEVK;LEPGS(1)DVEVK;LEPGS(1)DVEVK 158.42 0.00047576 33425000 279072 161759 199016 168453 153746 124731 217266 164565 109513 248330 TRUE FALSE 300437.9669 153726.2833 205651.0941 154689.851 147709.1595 129477.7256 188738.7132 186074.2105 119038.2428 240227.0124 1.250641898 0.639920889 0.856069815 0.64393196 0.614873232 0.53898071 0.785668153 0.77457655 0.49552397 1 17.87403886 -4.757924807 24.93074261 0.695710487 1.250642707 0.559858463 0.144771039 68.6605294 486968.0716 0.034204818 0.244093975 1.75E-05 4.757924807 0.554932221 LEPKEES(ph)PTR ddPTM_A459_MK2206_30min_R1 1 LEPKEESPTR 10 1 Q8N6T7-2;Q8N6T7;M0QZ09 Q8N6T7-2 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 LEPKEES(0.721)PT(0.279)R 120.03 0.024753 17161000 2573.2 2614.7 2910.4 2883.8 2565 1956.3 1782.7 2598.6 1984.5 1081.6 TRUE FALSE 2354.335828 2444.482555 2712.850157 3105.910776 2462.830619 2067.064015 1663.779336 2575.880714 2190.795877 1215.596774 1.936773672 2.010932085 2.231702334 2.555050197 2.026025959 1.700452041 1.368693445 2.119025626 1.802238969 1 10.24744904 -6.69201572 3.840476613 1.650133691 2.185252599 0.440079281 0.313214052 0.241983578 7.059955288 0.109905081 0.107097407 2.03E-07 6.69201572 0.535118907 LEPNS(ph)PMHGGTLLEDVVGGR ddPTM_A459_MK2206_30min_R1 7 LEPNSPMHGGTLLEDVVGGR 20 0 Q7Z4H7;Q5VY60;Q7Z4H7-3 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(0.999)PMHGGT(0.001)LLEDVVGGR;LEPNS(0.999)PMHGGT(0.001)LLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(0.993)PMHGGT(0.007)LLEDVVGGR 128.52 0.00012526 40397600 9419.07 8748.82 9241.78 6687.88 8280.21 7667.17 8372.31 7248.84 7384.13 7722.22 TRUE FALSE 8617.928635 8179.270228 8614.473723 7202.981676 7950.391702 8101.27854 7813.808476 7185.464156 8151.736738 8678.906913 0.992973968 0.94243092 0.992575886 0.829941115 0.916059105 0.933444571 0.900321729 0.827922713 0.93925846 1 13.08329763 -5.730737222 24.99663525 0.900774578 0.972637361 0.284279651 0.049675134 243.7058313 198415.0757 0.012903933 0.022347046 1.86E-06 5.730737222 0.071862783 LEPNS(ph)PMHGGTLLEDVVGGR ddPTM_A459_MK2206_30min_R2 5 LEPNSPMHGGTLLEDVVGGR 20 0 Q7Z4H7;Q5VY60;Q7Z4H7-3 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR 102.79 0.00045596 21250700 41009.9 50034.7 39371.3 42984.7 44289.4 45802.3 43381.4 29876.3 33463.9 41542.5 TRUE FALSE 44149.64948 47550.04956 40683.91949 39472.71251 42550.37562 47545.33862 37685.37007 33781.23499 36374.52953 40186.97163 1.098606033 1.183220522 1.012365895 0.9822266 1.058810204 1.183103297 0.937750931 0.840601658 0.905132386 1 15.29444024 -7.42488488 6.504678306 0.901679467 1.080959259 0.568284998 0.070447547 0.179470801 10.05376569 0.031350511 0.02091132 3.76E-08 7.42488488 0.179279792 LEPQELSPLS(ph)ATVFPK ddPTM_A459_MK2206_30min_R1 1 LEPQELSPLSATVFPK 16 0 Q3T8J9-3;Q3T8J9;A0A087WUE6;Q3T8J9-2;Q9H869-7;Q9H869-5;Q9H869-6;Q9H869-4;Q9H869-3;Q9H869-2;Q9H869;Q9H869-8;Q9H869-9 Q3T8J9-3;Q9H869-7 GON4L;YY1AP1 GON-4-like protein;YY1-associated protein 1 1 LEPQELS(0.361)PLS(0.639)ATVFPK 218.83 1.05E-10 20025000 3912.2 4071.4 3899.2 3037.2 4189.6 3129 3688 3640.6 2994.4 3033.5 TRUE FALSE 3579.446846 3806.35112 3634.533168 3271.12567 4022.71936 3306.161276 3441.980249 3608.770618 3305.678596 3409.312882 1.049902714 1.116456967 1.066060316 0.959467724 1.179920852 0.969744166 1.009581804 1.058503793 0.969602589 1 11.73526529 -6.993022726 0.518513736 0.99366559 1.078782825 0.165604221 0.061549634 1.834662205 1.055914189 0.056037393 0.059182828 1.02E-07 6.993022726 0.085117236 LEPQELSPLS(ph)ATVFPK ddPTM_A459_MK2206_30min_R2 1 LEPQELSPLSATVFPK 16 0 Q3T8J9-3;Q3T8J9;A0A087WUE6;Q3T8J9-2;Q9H869-7;Q9H869-5;Q9H869-6;Q9H869-4;Q9H869-3;Q9H869-2;Q9H869;Q9H869-8;Q9H869-9 Q3T8J9-3;Q9H869-7 GON4L;YY1AP1 GON-4-like protein;YY1-associated protein 1 1 LEPQELS(0.242)PLS(0.75)AT(0.008)VFPK 135.55 0.00041213 10044000 42456 52352 49621 53356 53950 52812 57608 39373 45138 50778 TRUE FALSE 45706.464 49752.27581 51275.33937 48996.64412 51831.65192 54821.79767 50044.0004 44519.18629 49064.02165 49121.11802 0.93048501 1.012849011 1.0438553 0.99746598 1.055180623 1.11605354 1.018787894 0.906314597 0.998837641 1 15.58405578 -7.551695333 24.35707392 0.964055824 1.029660868 0.207526088 0.050306303 230.5587676 194875.077 0.024441748 0.014111762 2.81E-08 7.551695333 0.065605044 LEPSTSTDQPVT(ph)PEPTSQATR ddPTM_A459_MK2206_30min_R2 2 LEPSTSTDQPVTPEPTSQATR 21 0 Q14676-3;Q14676;Q14676-2 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 LEPSTS(0.001)T(0.001)DQPVT(0.998)PEPTSQATR;LEPSTS(0.002)T(0.061)DQPVT(0.531)PEPT(0.391)S(0.015)QAT(0.001)R 295.03 7.22E-87 21642000 46949 54584 42285 57087 46040 58422 53863 41985 34381 48275 TRUE FALSE 50543.45154 51873.43793 43694.7608 52422.80949 44232.23827 60645.29015 46790.7234 47472.58366 37371.39723 46699.7907 1.08230574 1.110785234 0.935652176 1.122549131 0.947161381 1.29862017 1.001947176 1.016548103 0.800247639 1 15.51112846 -7.949358511 2.831175202 0.901788164 1.074196077 0.276286565 0.107734416 0.335337433 5.257080857 0.074055865 0.028146789 1.12E-08 7.949358511 0.172407913 LEPTAPALS(ph)PR ddPTM_A459_MK2206_30min_R1 5 LEPTAPALSPR 11 0 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR 182.35 3.70E-05 203248300 19474.7 16342.1 16509.4 14083.9 21030.6 17942.5 19186.5 16871.9 13883.8 14104.7 TRUE FALSE 17818.2745 15278.22632 15388.78793 15168.64442 20192.90667 18958.38884 17906.60359 16724.39076 15327.07069 15852.09672 1.124032663 0.963798454 0.970773027 0.956885684 1.273831912 1.195954654 1.12960474 1.055027045 0.966879711 1 13.95238605 -4.450783267 21.77554576 1.064946277 3.320057577 0.030709301 0.104731637 1646.301476 538740.9158 0.027914953 15126.75525 3.54E-05 4.450783267 2.2551113 LEPTAPALS(ph)PR ddPTM_A459_MK2206_30min_R2 4 LEPTAPALSPR 11 0 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR 171.49 0.00030256 160261000 206450 266066 236485 257116 261366 238386 267934 194360 227619 225222 TRUE FALSE 222255.9707 252853.5493 244369.2919 236108.8003 251103.4576 247457.9463 232753.944 219763.5193 247416.8892 217873.0246 1.020116975 1.160554639 1.121613345 1.083699098 1.152522016 1.135789742 1.06830088 1.008677048 1.135601296 1 17.73312806 -8.808814428 0.488910712 0.999107345 1.113729553 0.243790216 0.050820054 2.014603973 1.024508296 0.071690165 0.028275825 1.55E-09 8.808814428 0.114622207 LEPTNVQTVTCS(ph)PR ddPTM_A459_MK2206_30min_R1 2 LEPTNVQTVTCSPR 14 0 J3KTI7;J3QR52;J3QLN7;Q99741 J3KTI7 CDC6 Cell division control protein 6 homolog 1 LEPTNVQTVTCS(1)PR;LEPTNVQTVTCS(1)PR 165.24 0.0002545 53682000 7120.5 6121.8 6422.5 5163.3 6896.6 6006.1 6435.8 5754.6 5601 5339.6 TRUE FALSE 6514.864084 5723.269707 5986.558594 5560.978261 6621.893818 6346.160192 6006.479525 5704.288139 6183.243993 6001.10996 1.08560985 0.953701856 0.997575221 0.926658285 1.10344484 1.057497735 1.000894762 0.950538846 1.030350058 1 12.55101365 -4.736640437 24.18636011 1.003081084 1.085610413 0.20067241 0.049861491 2797.210914 2727901.126 0.012912873 0.836282968 1.83E-05 4.736640437 0.082529329 LEPTNVQTVTCS(ph)PR ddPTM_A459_MK2206_30min_R2 4 LEPTNVQTVTCSPR 14 0 J3KTI7;J3QR52;J3QLN7;Q99741 J3KTI7 CDC6 Cell division control protein 6 homolog 1 LEPTNVQTVTCS(1)PR;LEPTNVQTVT(0.013)CS(0.987)PR;LEPTNVQTVT(0.006)CS(0.994)PR;LEPTNVQTVT(0.084)CS(0.916)PR 213.71 1.78E-06 84883200 180141 189750 175556 175806 216158 183090 226514 152471 160350 211224 TRUE FALSE 193932.7335 180327.2909 181408.9494 161442.0874 207670.5508 190057.6182 196772.4397 172399.4832 174296.9532 204331.7782 0.949107061 0.882522007 0.887815645 0.790097795 1.016339958 0.930142242 0.963004587 0.843723305 0.853009526 1 17.64055407 -4.74233232 23.72943655 0.904096527 0.949107341 0.030943733 0.067768466 2888.278116 3586645.337 0.016933977 0.553585313 1.81E-05 4.74233232 0.045010815 LEPVYS(ph)PPGSPPPGDPR ddPTM_A459_MK2206_30min_R1 1 LEPVYSPPGSPPPGDPR 17 0 E9PJN1;O75676-2;O75676;A0A0A6YYC0 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 LEPVYS(0.576)PPGS(0.424)PPPGDPR 84.62 0.012175 41427000 1916.1 1502.5 1335 1349.9 2124.3 1217.5 1472.9 1805.4 1264.5 1014.4 TRUE FALSE 1753.125633 1404.686977 1244.38392 1453.869532 2039.684633 1286.433798 1374.645528 1789.615578 1395.9493 1140.07153 1.537733016 1.232104249 1.091496355 1.275244134 1.789084789 1.128379899 1.205753755 1.569739732 1.224440101 1 10.15490863 -10.35272153 6.595467862 0.999999994 1.336874441 0.188002741 0.211507492 2.01E-08 3.72E-09 0.205619798 0.049870125 4.44E-11 10.35272153 0.336874448 LEQLCEEFS(ph)EEER ddPTM_A459_MK2206_30min_R1 4 LEQLCEEFSEEER 13 0 Q9H3C7-3;Q9H3C7 Q9H3C7-3 GGNBP2 Gametogenetin-binding protein 2 1 LEQLCEEFS(1)EEER;LEQLCEEFS(1)EEER;LEQLCEEFS(1)EEER;LEQLCEEFS(1)EEER 207.4 1.11E-05 31800500 4291.05 4735.72 4914.96 3810.89 4320.23 4545.58 5093.05 4341.64 4549.24 4620.75 TRUE FALSE 3926.073664 4427.423767 4581.346209 4104.405408 4148.146091 4802.946811 4753.301927 4303.681499 5022.149778 5193.203395 0.756002291 0.852541954 0.882181163 0.79034174 0.798764419 0.924852436 0.915292848 0.82871422 0.967062022 1 12.34240902 -8.169975836 0.19419529 1.05651551 0.757071533 0.585243461 0.049016999 2.509498077 0.482654638 0.312613753 0.265844043 6.76E-09 8.169975836 -0.299443977 LEQLCEEFS(ph)EEER ddPTM_A459_MK2206_30min_R2 2 LEQLCEEFSEEER 13 0 Q9H3C7-3;Q9H3C7 Q9H3C7-3 GGNBP2 Gametogenetin-binding protein 2 1 LEQLCEEFS(1)EEER;LEQLCEEFS(1)EEER 181.51 0.00011519 4981900 10042.9 13031.6 12668 14955.8 14698.8 13361.5 13053.7 11602.1 12323.7 13491.4 TRUE FALSE 10811.79215 12384.46969 13090.3448 13733.8633 14121.65126 13869.98125 11339.73351 13118.53431 13395.59315 13051.17672 0.828415121 0.948915945 1.003001114 1.052308431 1.082021304 1.062737984 0.868866751 1.005161035 1.026389684 1 13.67189227 -4.800756939 2.017835961 1.013472017 0.779348456 0.51433437 0.054823176 0.628109673 2.92053316 0.016082236 0.271934741 1.58E-05 4.800756939 -0.234123561 LEQLCEEFS(ph)EEERVR ddPTM_A459_MK2206_30min_R1 3 LEQLCEEFSEEERVR 15 1 Q9H3C7-3;Q9H3C7 Q9H3C7-3 GGNBP2 Gametogenetin-binding protein 2 1 LEQLCEEFS(1)EEERVR;LEQLCEEFS(1)EEERVR;LEQLCEEFS(1)EEERVR 100.45 0.0041692 14696000 1952.48 1915.18 2478.2 2096.58 2734.88 1940.57 1873.53 2175.26 1441.73 1275.07 TRUE FALSE 1786.411323 1790.501434 2309.986689 2258.058955 2625.943938 2050.443396 1748.550232 2156.241931 1591.602993 1433.035298 1.246592687 1.249446847 1.611953796 1.57571761 1.832434932 1.430839421 1.220172479 1.504667704 1.110651632 1 10.48485843 -8.346936143 1.085316928 0.990759195 1.487245877 0.42659674 0.184279741 0.51226592 1.276418051 0.189439705 0.062636993 4.50E-09 8.346936143 0.496486682 LES(ph)LNIQR ddPTM_A459_MK2206_30min_R1 2 LESLNIQR 8 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 LES(1)LNIQR;LES(1)LNIQR 90.913 0.027601 21993200 4930.7 5206 5075.1 4769.7 5129.8 4755.9 5069.9 4903.9 4582.5 4499.2 TRUE FALSE 4511.318073 4867.088454 4730.616352 5137.06312 4925.469203 5025.174948 4731.696222 4861.025719 5058.867274 5056.594863 0.892165221 0.96252292 0.935533987 1.015913527 0.974068387 0.993786349 0.935747543 0.961323944 1.000449395 1 12.30395048 -3.511875838 1.013365356 0.977640607 6.80E-09 0.513401036 0.025138508 17.4486537 1.861645627 0.007937723 32.77913928 0.000307698 3.511875838 -0.9776406 LES(ph)LNIQR ddPTM_A459_MK2206_30min_R2 5 LESLNIQR 8 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 LES(1)LNIQR;LES(1)LNIQR;LES(1)LNIQR;LES(1)LNIQR;LES(1)LNIQR 84.31 0.036854 36041200 113831 163512 134369 139174 158798 128909 142261 125563 124961 145209 TRUE FALSE 122545.9889 155392.2318 138848.7954 127803.039 152562.7926 133814.7223 123581.9598 141974.5152 135829.8819 140470.8422 0.872394491 1.106224106 0.988452786 0.909818984 1.086081568 0.952615648 0.87976948 1.01070452 0.966961397 1 17.09991117 LES(ph)LSYQLSGLQK ddPTM_A459_MK2206_30min_R1 1 LESLSYQLSGLQK 13 0 Q03252 Q03252 LMNB2 Lamin-B2 1 LES(0.996)LS(0.004)YQLSGLQK 206.49 1.22E-05 5125300 2458.2 2493.6 2467.1 2026.2 1973.5 1996.5 2076.6 1813.6 1931 1921.9 TRUE FALSE 2249.117181 2331.266187 2299.640126 2182.258275 1894.891316 2109.540105 1938.073803 1797.743886 2131.73436 2159.999482 1.041258204 1.07929016 1.064648462 1.010304999 0.877264709 0.976639172 0.897256606 0.832289036 0.986914292 1 11.07681525 -6.047268195 3.847720602 0.921146414 1.061711901 0.592527689 0.049960509 0.146091543 4.472285894 0.014641489 0.020304438 8.97E-07 6.047268195 0.140565487 LES(ph)PSFTGTGDTEIAHATEDLENNGSK ddPTM_A459_MK2206_30min_R2 1 LESPSFTGTGDTEIAHATEDLENNGSK 27 0 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 LES(0.47)PS(0.382)FT(0.112)GT(0.018)GDT(0.018)EIAHATEDLENNGSK 65.141 0.00087161 6370200 16770 12804 14710 14893 17283 12554 18206 14078 11581 21876 TRUE FALSE 18053.92409 12168.17198 15200.42406 13676.19426 16604.38258 13031.75127 15815.53033 15918.04294 12588.29445 21162.18791 0.853121812 0.574995933 0.718282255 0.646256158 0.784625042 0.615803589 0.747348544 0.752192685 0.594848439 1 14.36920117 -11.06344624 4.156659422 1.00372883 0.697115517 0.529689455 0.085188506 0.002719722 0.000300609 0.076206406 0.018281453 8.64E-12 11.06344624 -0.306613313 LES(ph)SEGEIIQTVDR ddPTM_A459_MK2206_30min_R1 1 LESSEGEIIQTVDR 14 0 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 LES(0.648)S(0.352)EGEIIQTVDR 255.72 2.06E-28 4638300 933.06 882.87 905.47 731.22 789.78 906.2 1050.4 694.75 843.39 924.29 TRUE FALSE 853.6983473 825.3950025 844.0092192 787.5386911 758.3213902 957.5082609 980.3297326 688.675874 931.0634086 1038.798023 0.821813604 0.79456736 0.812486355 0.758124942 0.729998877 0.921746326 0.943715439 0.662954548 0.896289161 1 10.02069946 -6.761453808 25 0.867549147 0.784230673 0.244648948 0.086548905 0.720002674 1240497.441 0.029905108 0.02810133 1.73E-07 6.761453808 -0.083318474 LES(ph)TARPSESSEEFLEEEPEQR ddPTM_A459_MK2206_30min_R1 1 LESTARPSESSEEFLEEEPEQR 22 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 LES(0.245)T(0.245)ARPS(0.245)ES(0.21)S(0.056)EEFLEEEPEQR 75.703 0.00098545 6647400 498.29 583.13 608.17 391.68 531.46 535.58 726.95 511.71 364.47 331.2 TRUE FALSE 455.9078189 545.168131 566.8891149 421.8472615 510.2908228 565.9040768 678.4564919 507.2361734 402.3579608 372.2315564 1.224796262 1.464594072 1.522947491 1.133292581 1.370896191 1.520301186 1.822673226 1.362689876 1.080934579 1 8.540056557 -8.258289355 3.869782699 1.019451721 1.43969272 0.442751566 0.175638993 0.211911667 6.997876573 0.162900174 0.048225645 5.52E-09 8.258289355 0.420240999 LESENDEYER ddPTM_A459_MK2206_30min_R2 1 LESENDEYER 10 0 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 0 131.09 0.036968 3252800 11790 16640 15050 19097 15475 19309 19807 8939.9 17066 18938 FALSE TRUE 12692.65146 15813.6818 15551.75949 17536.71401 14867.37374 20043.81753 17206.31711 10108.37563 18550.36983 18320.05461 0.692828255 0.863189665 0.848892638 0.957241361 0.811535449 1.094091582 0.939206649 0.551765584 1.012571754 1 14.16113618 -4.28687424 1.481574368 0.8940539 0.239463642 0.163841524 0.140448213 8.776715456 6.530585755 0.039651 12.14923866 5.17E-05 4.28687424 -0.654590258 LESEST(ph)SPSLEMK ddPTM_A459_MK2206_30min_R1 2 LESESTSPSLEMK 13 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 LES(0.004)ES(0.063)T(0.791)S(0.141)PS(0.002)LEMK;LES(0.001)ES(0.065)T(0.867)S(0.065)PSLEMK 234.04 3.64E-13 45018000 12089 12176.9 12190.9 9923.2 11217.7 9431.7 11238.5 10479.7 9958.6 9194.3 TRUE FALSE 11060.76707 11384.1816 11363.41567 10687.48658 10770.87526 9965.714703 10488.80017 10388.07709 10993.83211 10333.3593 1.070394124 1.101692225 1.099682625 1.034270296 1.042340148 0.96442158 1.015042627 1.005295257 1.063916563 1 13.33502172 -5.960880221 2.194397182 1.012410837 1.092279437 0.619240712 0.026209001 0.198280092 1.92784706 0.008238311 0.013235159 1.09E-06 5.960880221 0.0798686 LESEST(ph)SPSLEMK ddPTM_A459_MK2206_30min_R2 2 LESESTSPSLEMK 13 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 LESES(0.002)T(0.992)S(0.006)PSLEMK;LESES(0.002)T(0.495)S(0.495)PS(0.008)LEMK 225.72 1.61E-09 40930500 309260 365160 334597 335155 333548 270375 366885 266088 270660 346014 TRUE FALSE 332937.1834 347026.6854 345752.297 307771.7644 320451.2296 280664.3101 318712.5588 300866.6152 294201.5176 334723.5915 0.994663035 1.036755981 1.032948695 0.919480348 0.957360753 0.838495754 0.952166405 0.898850941 0.878938698 1 18.35261071 -5.76592095 24.5663157 0.915948005 1.022985925 0.528389931 0.043423394 61.70185786 338230.2965 0.01159445 0.017890035 1.71E-06 5.76592095 0.10703792 LESESTS(ph)PSLEMK ddPTM_A459_MK2206_30min_R1 1 LESESTSPSLEMK 13 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 LESES(0.021)T(0.348)S(0.538)PS(0.093)LEMK 118.61 0.01286 8534200 4011 4435.3 4253.9 3468.4 3906.4 3936.6 3861.5 4176.9 3533.3 3725.6 TRUE FALSE 3669.843387 4146.561164 3965.15712 3735.536769 3750.799816 4159.48689 3603.906381 4140.381804 3900.599179 4187.155455 0.876452624 0.990305043 0.94698111 0.892141887 0.895787094 0.993392038 0.860705178 0.988829254 0.93156302 1 12.03175477 -8.877706004 0.817328419 0.999777363 0.927885457 0.176219575 0.046279714 2.172591003 2.645476897 0.044454987 0.015194344 1.33E-09 8.877706004 -0.071891906 LESESTS(ph)PSLEMK ddPTM_A459_MK2206_30min_R2 2 LESESTSPSLEMK 13 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 LESEST(0.213)S(0.724)PS(0.063)LEMK;LES(0.039)ES(0.023)T(0.156)S(0.626)PS(0.156)LEMK 245.5 1.12E-18 38632000 296631 337632 330455 338506 335023 254312 363360 266414 269427 316116 TRUE FALSE 319341.2974 320865.6858 341472.2048 310848.977 321868.3137 263990.0214 315650.3955 301235.2245 292861.2734 305801.1608 1.044277584 1.049262485 1.116647837 1.016506857 1.052541177 0.863273444 1.03220797 0.985068937 0.95768529 1 18.22223436 -6.57297406 24.99997416 0.969321997 1.057190663 0.469816717 0.046845908 96.66237151 48238.52833 0.01507889 0.015078893 2.67E-07 6.57297406 0.087868665 LESLS(ph)YQLSGLQK ddPTM_A459_MK2206_30min_R1 1 LESLSYQLSGLQK 13 0 Q03252 Q03252 LMNB2 Lamin-B2 1 LES(0.271)LS(0.729)YQLSGLQK 171.21 0.00020766 4934400 1992.6 2033.4 1991.3 1645.5 1547.8 1482.4 1674.9 1369.5 1635.3 1430.8 TRUE FALSE 1823.118906 1901.02529 1856.136104 1772.236695 1486.147848 1566.332207 1563.170477 1357.526606 1805.295287 1608.058306 1.133739305 1.182186792 1.154271644 1.102097286 0.924187788 0.974051874 0.972085696 0.844202353 1.122655367 1 10.651104 -6.099568154 3.761085209 0.965441068 1.15650784 0.617312379 0.066354289 0.146106239 3.753775738 0.019173434 0.025873367 7.95E-07 6.099568154 0.191066773 LESLYS(ph)DEEDESAVGADK ddPTM_A459_MK2206_30min_R1 4 LESLYSDEEDESAVGADK 18 0 Q9UP95-3;Q9UP95-5;Q9UP95-2;Q9UP95-6;Q9UP95;I3L4N6;Q9UP95-7 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 LESLYS(0.995)DEEDES(0.005)AVGADK;LESLYS(1)DEEDESAVGADK;LESLYS(1)DEEDESAVGADK;LESLYS(1)DEEDESAVGADK 262.36 8.74E-43 20549700 4007.66 4851.21 4977.01 4224.51 3942.31 3778.79 5158.87 4581.29 5478.8 6120.3 TRUE FALSE 3666.787472 4535.395347 4639.184428 4549.882492 3785.279445 3992.741824 4814.731195 4541.236265 6048.340866 6878.52897 0.533077274 0.659355418 0.674444267 0.661461558 0.550303628 0.580464492 0.699965242 0.660204571 0.879307319 1 12.74788435 -8.367346427 1.613306287 1.003478527 0.620424712 0.862847351 0.051189883 0.127005214 0.676386503 0.050003618 0.014797713 4.29E-09 8.367346427 -0.383053815 LESLYS(ph)DEEDESAVGADK ddPTM_A459_MK2206_30min_R2 3 LESLYSDEEDESAVGADK 18 0 Q9UP95-3;Q9UP95-5;Q9UP95-2;Q9UP95-6;Q9UP95;I3L4N6;Q9UP95-7 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 LESLYS(1)DEEDESAVGADK;LES(0.002)LYS(0.998)DEEDESAVGADK;LESLYS(1)DEEDESAVGADK 170.16 5.85E-07 1987800 27777.3 20225 22652.2 24340.6 24208.1 22558.5 27502.1 16180.6 19461.8 25572.6 TRUE FALSE 29903.95145 19220.65591 23407.41304 22351.89512 23257.56836 23416.97952 23891.04123 18295.45998 21154.55219 24738.16816 1.208818343 0.776963589 0.9462064 0.903538814 0.940149174 0.94659311 0.965756279 0.739564056 0.855138184 1 14.59445105 -7.709501086 24.99975609 0.848011159 0.945289638 0.103876895 0.116139692 192.4857042 92649.79295 0.051376103 0.029661958 1.95E-08 7.709501086 0.097278479 LESPTVSTLTPSS(ph)PGK ddPTM_A459_MK2206_30min_R2 2 LESPTVSTLTPSSPGK 16 0 A0A087WTV6;A0A087WZR9;Q96C36 A0A087WTV6 PYCR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 1 LESPTVSTLTPS(0.008)S(0.992)PGK;LESPTVSTLTPS(0.23)S(0.769)PGK 160.79 5.15E-05 5790400 48421 53730 61076 48249 43208 40446 49495 40498 50119 56562 TRUE FALSE 52128.14899 51061.84633 63112.24336 44306.90236 41511.43682 41985.20087 42996.24705 45791.22765 54478.26003 54716.38657 0.952697213 0.933209401 1.153443188 0.809755635 0.758665537 0.767324078 0.785802019 0.836883254 0.995647985 1 15.73968534 -5.793364662 24.99971989 0.833787866 1.005126051 0.355390204 0.098333396 192.2325729 150530.7278 0.027922001 0.041418917 1.61E-06 5.793364662 0.171338185 LESQAGICLGDSQGMS(ph)ER ddPTM_A459_MK2206_30min_R2 1 LESQAGICLGDSQGMSER 18 0 Q70CQ2-3;Q70CQ2-2;Q70CQ2 Q70CQ2-3 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 LESQAGICLGDS(0.001)QGMS(0.999)ER 84.195 0.03084 29302000 55407 149960 106820 214880 192300 230880 146740 137490 162240 72620 TRUE FALSE 59649.00252 142513.2045 110381.3255 197323.6166 184749.3358 239666.3002 127472.8617 155460.4151 176351.3419 70250.41535 0.849091101 2.028645721 1.57125513 2.808860498 2.629868234 3.411599761 1.814549581 2.212946561 2.510324545 1 16.10021913 -3.462664317 10.08351854 2.166365144 1.638252104 0 0.767543996 0 0 0.176518768 0 0.000344616 3.462664317 -0.52811304 LESS(ph)EGEIIQTVDR ddPTM_A459_MK2206_30min_R1 1 LESSEGEIIQTVDR 14 0 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 LES(0.107)S(0.893)EGEIIQTVDR 221.59 6.13E-09 3781700 828.52 754.68 791.15 483.7 566.29 581.34 747.47 635.29 631.6 723.58 TRUE FALSE 758.0500233 705.5501948 737.4489423 520.9546578 543.7334702 614.2549684 697.6076401 629.7357265 697.2570802 813.2225532 0.932155682 0.867597919 0.906823033 0.640605276 0.668615827 0.755334399 0.857831153 0.774370711 0.857400078 1 9.667506416 -10.1466959 22.12260511 1 0.801570016 0.281351584 0.092323782 0 0 0.097496082 0.023646273 7.13E-11 10.1466959 -0.198429984 LESS(ph)EGEIIQTVDR ddPTM_A459_MK2206_30min_R2 1 LESSEGEIIQTVDR 14 0 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 LES(0.152)S(0.848)EGEIIQTVDR 102.9 0.0072619 2900900 4232.7 5984.5 4988 5795.2 5274.5 7936.5 6432.3 4425.1 6081.3 5525.4 TRUE FALSE 4556.758766 5687.318432 5154.29743 5321.713622 5067.396628 8238.529069 5587.731283 5003.475764 6610.240482 5345.106651 0.852510355 1.064023378 0.964302074 0.995623468 0.948044063 1.541321737 1.045391916 0.9360853 1.236690101 1 12.38400302 LESSDLT(ph)PPHS(ph)PPPSSR ddPTM_A459_MK2206_30min_R2 1 LESSDLTPPHSPPPSSR 17 0 Q9H7P9;Q9H7P9-3;H7BXC7 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 2 LES(0.002)S(0.002)DLT(0.996)PPHS(0.993)PPPS(0.004)S(0.003)R 103.71 0.0099748 14393000 74224 104140 94362 88861 82752 94520 96536 64290 84069 77330 TRUE FALSE 79906.64651 98968.55903 97507.98198 81600.77205 79502.74068 98117.02483 83860.70724 72692.92374 91381.16966 74806.72843 1.06817459 1.322990072 1.303465397 1.090821291 1.062775266 1.311606949 1.12103161 0.971743121 1.221563509 1 16.19088042 -8.011107105 0.286033226 0.985745467 1.239995756 0.181992697 0.113530866 2.724804585 0.842539826 0.256119714 0.231611253 9.75E-09 8.011107105 0.254250289 LESTARPSES(ph)SEEFLEEEPEQR ddPTM_A459_MK2206_30min_R1 1 LESTARPSESSEEFLEEEPEQR 22 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 LESTARPSES(0.741)S(0.259)EEFLEEEPEQR 127.16 1.59E-05 5625700 1127.6 1171.9 1244.3 768.69 1056.5 889.7 1176.4 756.31 1182.5 1123 TRUE FALSE 1031.691699 1095.609097 1159.840383 827.894637 1014.417368 940.0740451 1097.924502 749.6976614 1305.425107 1262.125718 0.817423878 0.868066533 0.918957887 0.655952593 0.803737182 0.744833919 0.869901062 0.593996026 1.034306716 1 10.30163991 -8.298048371 24.93260531 1.017153595 0.789335195 0.493374697 0.094342507 541.6985336 368919.8487 0.088671204 0.022897413 5.03E-09 8.298048371 -0.2278184 LESTARPSES(ph)SEEFLEEEPEQR ddPTM_A459_MK2206_30min_R2 2 LESTARPSESSEEFLEEEPEQR 22 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 LEST(0.001)ARPS(0.003)ES(0.883)S(0.113)EEFLEEEPEQR;LES(0.001)T(0.001)ARPS(0.02)ES(0.776)S(0.203)EEFLEEEPEQR 87.958 0.00028345 8092100 9347.8 12806.5 9069.3 12223.2 9470.9 11327.4 10024.5 9997.2 9934.6 10128.5 TRUE FALSE 10063.47476 12170.54783 9371.665935 11224.52546 9099.024879 11758.47214 8708.271108 11303.86837 10798.69355 9798.007874 1.027093965 1.242145137 0.956486875 1.145592615 0.928660703 1.200088048 0.888779762 1.153690476 1.102131544 1 13.25827274 -5.266725416 24.85673277 1.05153935 1.134619546 0.091610792 0.109686732 891.6536082 4192871.654 0.026297867 0.05749074 5.41E-06 5.266725416 0.083080196 LESTS(ph)PK ddPTM_A459_MK2206_30min_R2 2 LESTSPK 7 0 Q03111 Q03111 MLLT1 Protein ENL 1 LES(0.006)T(0.04)S(0.954)PK;LES(0.212)T(0.258)S(0.53)PK 112.41 0.014575 60865000 702800 360890 468030 400320 576030 247080 633750 1508200 812080 769450 TRUE FALSE 756606.9084 342968.7274 483633.8866 367612.5754 553412.1679 256482.8025 550537.8637 1705326.918 882713.2505 744342.9095 1.016476276 0.460767105 0.649746079 0.493875297 0.743490884 0.344576135 0.739629352 2.291050128 1.185895962 1 19.50560788 -7.604501644 9.696294902 1.551763044 0.606676417 0.547255255 0.357249633 0.216342681 23.83259728 0.155118013 0.08938965 2.49E-08 7.604501644 -0.945086626 LETLPLS(ph)PGSGAEPDTKPVFHTLTNGHAK ddPTM_A459_MK2206_30min_R1 2 LETLPLSPGSGAEPDTKPVFHTLTNGHAK 29 1 A0A087WXS2;E0YMJ8;A0A0C4DGS8;A0A087WZC2;P35680-3;P35680-4;P35680-2;P35680 A0A087WXS2 HNF1B Hepatocyte nuclear factor 1-beta 1 LET(0.003)LPLS(0.932)PGS(0.064)GAEPDTKPVFHTLTNGHAK;LET(0.037)LPLS(0.884)PGS(0.078)GAEPDT(0.001)KPVFHTLTNGHAK 81.38 9.89E-06 93088000 11848.9 11355 11735.8 10709 11763.6 10959.8 11344.1 11093.7 10234.5 9081.9 TRUE FALSE 10841.08883 10615.78744 10939.20659 11533.80904 11295.0309 11580.3344 10587.35579 10996.70895 11298.4129 10207.03434 1.062119366 1.040046216 1.071732124 1.129986307 1.106592819 1.134544474 1.03726072 1.077365725 1.106924159 1 13.31727613 -5.521626138 24.99853142 1.089827107 1.052284379 0.093599471 0.039267954 87.56217563 1747464.302 0.010431699 0.018348416 3.01E-06 5.521626138 -0.037542728 LETLPLS(ph)PGSGAEPDTKPVFHTLTNGHAK ddPTM_A459_MK2206_30min_R2 5 LETLPLSPGSGAEPDTKPVFHTLTNGHAK 29 1 A0A087WXS2;E0YMJ8;A0A0C4DGS8;A0A087WZC2;P35680-3;P35680-4;P35680-2;P35680 A0A087WXS2 HNF1B Hepatocyte nuclear factor 1-beta 1 LET(0.036)LPLS(0.508)PGS(0.448)GAEPDT(0.008)KPVFHTLTNGHAK;LET(0.006)LPLS(0.59)PGS(0.133)GAEPDT(0.098)KPVFHT(0.137)LT(0.036)NGHAK;LET(0.074)LPLS(0.653)PGS(0.189)GAEPDT(0.084)KPVFHTLTNGHAK;LET(0.018)LPLS(0.811)PGS(0.167)GAEPDT(0.003)KPVFHTLTNGHAK;LET(0.005)LPLS(0.989)PGS(0.005)GAEPDT(0.001)KPVFHTLTNGHAK 75.956 2.45E-05 52505000 126917 149760 130390 154214 152601 129562 165826 116598 116260 145723 TRUE FALSE 136633.8631 142323.1362 134737.1375 141614.2229 146609.118 134492.5727 144052.847 131837.7589 126372.0847 140968.0704 0.969253978 1.009612572 0.955798977 1.004583679 1.040016491 0.954064082 1.021882803 0.935231351 0.896458923 1 17.1050089 -7.779363269 24.93097649 0.93688381 0.99345052 0.286761613 0.03540749 266.1805132 370234.5453 0.018317851 0.008828402 1.66E-08 7.779363269 0.056566709 LEVNGRES(ph)EEENLNK ddPTM_A459_MK2206_30min_R2 1 LEVNGRESEEENLNK 15 1 O95793-2;O95793-3;O95793;Q5JW30;A0A087X1A5;Q5JW28 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 LEVNGRES(1)EEENLNK 60.093 0.046668 7744600 17545 15167 14349 14868 17032 12695 15356 14115 11912 16307 TRUE FALSE 18888.25869 14413.82883 14827.3885 13653.23684 16363.2381 13178.11712 13339.73875 15959.87896 12948.08423 15774.90393 1.19736125 0.913718962 0.939935265 0.865503645 1.037295579 0.835384937 0.845630428 1.011725906 0.820802731 1 13.9453436 -4.761024458 24.84259918 0.91704586 1.197361584 0.561280042 0.073843551 6.471845425 386994.0953 0.017234529 0.098414098 1.73E-05 4.761024458 0.280315724 LEVPAERS(ph)PR ddPTM_A459_MK2206_30min_R1 1 LEVPAERSPR 10 1 Q9UJF2-2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 LEVPAERS(1)PR 110.98 0.0050209 13143000 3687.2 3582.2 3720.9 3350.7 4266 3502.8 3209 3357.1 2470 2074.2 TRUE FALSE 3373.584278 3348.998129 3468.335675 3608.771495 4096.076187 3701.125509 2994.933465 3327.749229 2726.765339 2331.167555 1.447165078 1.436618368 1.487810547 1.548053243 1.757092139 1.587670307 1.284735393 1.427503236 1.169699421 1 11.18683699 -8.249468385 1.02532789 1.004142847 1.535565397 0.72668958 0.107251154 0.285604965 0.61376661 0.111155669 0.038200812 5.63E-09 8.249468385 0.53142255 LEVPAERS(ph)PR ddPTM_A459_MK2206_30min_R2 4 LEVPAERSPR 10 1 Q9UJF2-2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 LEVPAERS(1)PR;LEVPAERS(1)PR;LEVPAERS(1)PR;LEVPAERS(1)PR 117.27 0.0033417 48344300 113211 139892 138037 148002 168540 141789 155479 111833 119977 129767 TRUE FALSE 121878.5212 132945.1667 142639.0847 135909.7632 161922.2728 147184.8798 135064.4205 126449.9571 130412.3826 125532.7134 0.970890518 1.059047981 1.136270226 1.082664108 1.289881086 1.172482262 1.075930065 1.00730681 1.038871694 1 16.93770385 -7.564880009 4.353835866 1.018758946 1.12310235 0.258940392 0.077668143 0.317845267 13.33856102 0.041566221 0.023657527 2.72E-08 7.564880009 0.104343404 LEVS(ph)PEAQPTAR ddPTM_A459_MK2206_30min_R1 4 LEVSPEAQPTAR 12 0 Q6WKZ4 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 LEVS(0.968)PEAQPT(0.032)AR;LEVS(0.993)PEAQPT(0.007)AR;LEVS(0.999)PEAQPT(0.001)AR;LEVS(1)PEAQPTAR 171.36 0.00026897 58825000 10450.4 10506.5 10591.2 8995.3 10540 9054 11020.1 10068.8 9032.8 9634 TRUE FALSE 9561.538603 9822.52494 9872.298853 9688.119565 10120.16948 9566.629656 10284.96924 9980.769543 9971.791884 10827.53265 0.883076404 0.907180357 0.911777334 0.894767061 0.934669957 0.883546599 0.949890392 0.921795377 0.920966226 1 13.4024169 -14.52287874 0.148271573 1.315497601 0.884467976 0.720548443 0.017586664 68.63235348 0.605527789 6.352198011 0.086927361 3.00E-15 14.52287874 -0.431029625 LEVS(ph)PEAQPTAR ddPTM_A459_MK2206_30min_R2 3 LEVSPEAQPTAR 12 0 Q6WKZ4 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 LEVS(0.999)PEAQPT(0.001)AR;LEVS(1)PEAQPTAR;LEVS(1)PEAQPTAR 185.32 0.00010452 65805500 128564 151437 149861 133242 147428 138657 145652 119729 134543 162462 TRUE FALSE 138406.9587 143916.8588 154857.2909 122355.7024 141639.236 143933.6893 126527.7174 135377.9914 146245.3069 157160.8782 0.88067056 0.91572954 0.985342489 0.778537914 0.901237239 0.915836631 0.805084057 0.861397524 0.930545239 1 17.26188261 -8.557645493 3.897106642 0.999859044 0.881447058 0.313337415 0.055138818 0.274478589 12.87750812 0.053942223 0.014151149 2.77E-09 8.557645493 -0.118411986 LEVTEIVKPS(ph)PK ddPTM_A459_MK2206_30min_R1 1 LEVTEIVKPSPK 12 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LEVTEIVKPS(1)PK 70.728 0.034307 146370000 5172.8 6926.8 6521.2 5865.9 3708.7 3276.8 4777.6 4389.6 5610.2 5394.7 TRUE FALSE 4732.826197 6475.864061 6078.559113 6317.692634 3560.974626 3462.329584 4458.895021 4351.22219 6193.400366 6063.036164 0.780603326 1.068089301 1.00256026 1.042001476 0.587325315 0.571055407 0.735422798 0.717663902 1.021501472 1 12.56582471 -6.245861939 24.92462973 0.746152434 0.982172342 0.271309225 0.157820923 933.7469844 1494038.319 0.047053819 0.060524596 5.68E-07 6.245861939 0.236019908 LEVTEIVKPS(ph)PK ddPTM_A459_MK2206_30min_R2 3 LEVTEIVKPSPK 12 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LEVTEIVKPS(1)PK;LEVTEIVKPS(1)PK;LEVT(0.002)EIVKPS(0.998)PK 142.45 0.0043086 111416000 139576 116658 117374 92258 95773 70742.2 130244 90242 81619 120792 TRUE FALSE 150262.0459 110864.9334 121287.1906 84720.22628 92012.4708 73434.34399 113142.8063 102036.9392 88718.07309 116850.5669 1.285933392 0.948775314 1.037968354 0.725030511 0.787437094 0.628446621 0.968269212 0.873225881 0.75924384 1 16.83430521 -4.270709977 0.985818541 0.819774977 2.075325602 0.560449995 0.119070852 3.418338282 1.327155487 0.038551601 5.798281773 5.36E-05 4.270709977 1.255550625 LEY(ph)T(ph)EEEVLEMERK ddPTM_A459_MK2206_30min_R1 2 LEYTEEEVLEMERK 14 1 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 2 LEY(1)T(1)EEEVLEMERK;LEY(1)T(1)EEEVLEMERK 109.15 0.0015678 14875700 2718.05 889.39 687.42 482.61 5368.7 4504.6 4139 2429 680.66 845.1 TRUE FALSE 2486.865574 831.4905493 640.7598457 519.7807058 5154.853311 4759.646559 3862.894862 2407.763509 751.4170428 949.7973682 2.618311713 0.875439938 0.674627944 0.547254313 5.427319009 5.01122315 4.067072611 2.535028617 0.791134054 1 9.891475948 -1.911905316 11.34313578 2.466116656 34.770178 0 1.794827019 0 0 0.456538525 0 0.012248832 1.911905316 32.30406134 LFAPQQILQCS(ph)PAN ddPTM_A459_MK2206_30min_R2 1 LFAPQQILQCSPAN 14 0 K7ERV3;P04183 K7ERV3 TK1 "Thymidine kinase;Thymidine kinase, cytosolic" 1 LFAPQQILQCS(1)PAN 80.706 0.033421 1333500 9904.7 9709.3 9111.8 11604 10963 11812 10439 8013.6 9200.6 11186 TRUE FALSE 10663.01145 9227.150281 9415.582864 10655.91608 10532.53754 12261.51394 9068.346761 9061.005035 10000.85156 10821.00174 0.985399661 0.852707587 0.870121186 0.984743958 0.973342191 1.13312189 0.838032096 0.837353625 0.924207555 1 13.40154644 -4.426646951 21.02703789 0.932815051 6.536039512 0.028370619 0.088030799 1512.2818 331353.6543 0.022558214 1122.922167 3.74E-05 4.426646951 5.603224462 LFDDEAS(ph)VDEPR ddPTM_A459_MK2206_30min_R2 2 LFDDEASVDEPR 12 0 A0A0U1RR46;A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35;Q8NI35-5 A0A0U1RR46 INADL InaD-like protein 1 LFDDEAS(1)VDEPR;LFDDEAS(1)VDEPR 89.44 0.025775 8660000 24998 31630 34239 24094.3 29962 34194 31712 22932.7 30523 35125 TRUE FALSE 26911.8661 30059.30019 35380.51117 22125.71862 28785.54133 35495.27663 27548.17631 25930.08263 33177.83537 33978.87413 0.792017593 0.884646739 1.04125025 0.651161028 0.847159951 1.044627803 0.810744235 0.763123655 0.976425388 1 15.05235043 -6.585414044 24.99997488 0.902800915 0.84570745 0.083108206 0.119771211 243.6741981 97411.84388 0.040484258 0.040484261 2.60E-07 6.585414044 -0.057093465 LFDDEAS(ph)VDEPRR ddPTM_A459_MK2206_30min_R1 2 LFDDEASVDEPRR 13 1 A0A0U1RR46;A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35;Q8NI35-5 A0A0U1RR46 INADL InaD-like protein 1 LFDDEAS(1)VDEPRR;LFDDEAS(1)VDEPRR 123.72 0.0012314 2684000 2274.8 2010.1 2240.6 1940.62 2119.3 2597.6 2529.6 2154.2 2086.41 2483.6 TRUE FALSE 2081.316315 1879.242125 2088.514315 2090.086889 2034.883793 2744.673867 2360.855 2135.366057 2303.299786 2791.287118 0.745647519 0.673252892 0.748226258 0.748789644 0.729012712 0.983300446 0.845794395 0.765011253 0.825174799 1 11.44671482 -6.696554579 16.68088189 0.866787297 0.728038899 0.549288147 0.06928363 2.815581998 722.7683296 0.023218098 0.023217566 2.01E-07 6.696554579 -0.138748398 LFDDEAS(ph)VDEPRR ddPTM_A459_MK2206_30min_R2 2 LFDDEASVDEPRR 13 1 A0A0U1RR46;A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35;Q8NI35-5 A0A0U1RR46 INADL InaD-like protein 1 LFDDEAS(1)VDEPRR;LFDDEAS(1)VDEPRR 97.203 0.0069616 4925700 21033.6 24789.7 22847 22987.9 22118.3 23805.2 26917 17615.8 16897.9 22928 TRUE FALSE 22643.94859 23558.67955 23608.70758 21109.71504 21249.82441 24711.12357 23382.76557 19918.24554 18367.6488 22179.86124 1.020923817 1.062165326 1.064420887 0.951751447 0.958068411 1.114124354 1.054234078 0.89803292 0.8281228 1 14.43696272 -7.767487079 24.94036579 0.897308337 1.031830595 0.463993984 0.060466301 122.4175995 504831.5119 0.032827847 0.01640633 1.71E-08 7.767487079 0.134522258 LFDDS(ph)DER ddPTM_A459_MK2206_30min_R2 1 LFDDSDER 8 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFDDS(1)DER 84.817 0.036143 3526400 25956 12851 20370 17484 10907 11262 11945 10765 7880.4 16093 TRUE FALSE 27943.21132 12212.83803 21049.12563 16055.50127 10478.73638 11690.5833 10376.60715 12172.02246 8565.822947 15567.88673 1.794926428 0.784489137 1.352086253 1.03132182 0.673099475 0.750942212 0.666539225 0.781867358 0.550223874 1 13.9262855 -1.522878745 0.501886456 0.724133272 29.77965351 0.598305356 0.228122423 75.81303274 0.801399056 0.122493702 2324.616383 0.03 1.522878745 29.05552023 LFDHPES(ph)PTPNPTEPLFLAQAEVYK ddPTM_A459_MK2206_30min_R1 1 LFDHPESPTPNPTEPLFLAQAEVYK 25 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 LFDHPES(0.498)PT(0.498)PNPT(0.004)EPLFLAQAEVYK 104.12 4.39E-07 52186000 3418.9 3639.7 4093.5 3505 3831.5 3804.6 3656.1 2992.2 3704.4 3352.9 TRUE FALSE 3128.104602 3402.754868 3815.644625 3774.955707 3678.883242 4020.013164 3412.20824 2966.039511 4089.485636 3768.282565 0.83011413 0.902998862 1.012568606 1.001770871 0.976275844 1.066802474 0.905507531 0.78710645 1.085238584 1 11.87969143 -4.976715815 3.492198769 0.972775326 0.833981962 0.259878565 0.079941444 0.354776458 8.800425793 0.021121246 0.101116783 1.06E-05 4.976715815 -0.138793364 LFDQAFGLPR ddPTM_A459_MK2206_30min_R1 1 LFDQAFGLPR 10 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 0 142.98 0.015788 6195300 2512.8 2336.8 2143.2 2254.2 2050.2 1790.3 1854.2 2358.3 2044.9 1548.6 FALSE TRUE 2299.073165 2184.673895 1997.725555 2427.818875 1968.536193 1891.665239 1730.509701 2337.681632 2257.474673 1740.452259 1.320963073 1.255233451 1.147819795 1.394935633 1.131048658 1.086881429 0.994287371 1.343146081 1.297062106 1 10.76524653 -6.313893905 24.97908842 1.149079542 1.268565257 0.237589005 0.119754724 596.9001755 284244.9931 0.038965884 0.044183192 4.85E-07 6.313893905 0.119485715 LFGGFNSSDTVTS(ph)PQR ddPTM_A459_MK2206_30min_R1 4 LFGGFNSSDTVTSPQR 16 0 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 LFGGFNSSDTVT(0.051)S(0.949)PQR;LFGGFNSSDTVT(0.228)S(0.772)PQR;LFGGFNS(0.018)S(0.006)DT(0.028)VT(0.043)S(0.906)PQR;LFGGFNSSDTVT(0.231)S(0.769)PQR 197.73 1.03E-06 133993000 18405.9 15484.4 15562.2 14627.8 17888.9 15526.5 16852.6 15708.4 13670.9 12940.7 TRUE FALSE 16840.38155 14476.36275 14505.88122 15754.43569 17176.34723 16405.59701 15728.3938 15571.06311 15092.03898 14543.89161 1.15790065 0.995356891 0.997386505 1.083233849 1.181000773 1.128006001 1.081443277 1.07062563 1.037689181 1 13.82812573 -8.411511102 1.785740729 1.000962428 1.086534307 0.206307585 0.056626549 0.631949342 4.242182296 0.059308391 0.017112373 3.88E-09 8.411511102 0.085571879 LFGGFNSSDTVTS(ph)PQR ddPTM_A459_MK2206_30min_R2 4 LFGGFNSSDTVTSPQR 16 0 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 LFGGFNSSDTVT(0.225)S(0.775)PQR;LFGGFNSSDTVT(0.07)S(0.93)PQR;LFGGFNSSDT(0.001)VT(0.043)S(0.956)PQR;LFGGFNSSDTVT(0.009)S(0.991)PQR 238.64 2.34E-21 79793000 433868 494594 412972 526230 470308 526670 540627 343981 464831 480800 TRUE FALSE 467085.2677 470033.1812 426740.2804 483235.3257 451841.3448 546712.7959 469642.0255 388940.4978 505261.1602 465111.5354 1.004243568 1.010581646 0.91750096 1.038966547 0.971468799 1.175444499 1.009740653 0.836230599 1.086322574 1 18.8272172 -3.496046978 2.832853117 1.002952577 2.651330112 0 0.086141236 209293.4397 2314.053043 0.022505601 2238691.673 0.000319119 3.496046978 1.648377535 LFGTS(ph)PATEAAPPPPEPVPAAEGPATVQSVEDFVPDDRLDR ddPTM_A459_MK2206_30min_R1 1 LFGTSPATEAAPPPPEPVPAAEGPATVQSVEDFVPDDRLDR 41 1 Q3YEC7;Q3YEC7-2;G3V154;F2Z2T0 Q3YEC7 RABL6 Rab-like protein 6 1 LFGT(0.36)S(0.627)PAT(0.013)EAAPPPPEPVPAAEGPATVQSVEDFVPDDRLDR 50.772 0.0010787 7644300 365.95 454.67 455.16 440.01 497.6 490.25 694.11 744.71 487.15 595.09 TRUE FALSE 334.8240308 425.0709004 424.2650073 473.8996464 477.7795383 518.0075313 647.8071884 738.199079 537.7909858 668.8142419 0.500623357 0.635558984 0.634354027 0.708566919 0.714368069 0.774516299 0.968590601 1.103743062 0.804096193 1 9.385461759 -6.780448493 0.937434507 0.990649669 0.593380005 0.776821149 0.084340442 0.25601007 0.484820549 0.051202337 0.046170148 1.66E-07 6.780448493 -0.397269664 LFIGGLSFETTEESLR ddPTM_A459_MK2206_30min_R1 2 LFIGGLSFETTEESLR 16 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 225.15 1.81E-10 25695000 3242.17 3561.1 3612.83 3683.7 4306.3 3417.4 3439 3654.4 3095.1 3723.6 FALSE TRUE 2966.406416 3329.271743 3367.601166 3967.419212 4134.770952 3610.890235 3209.590585 3622.449966 3416.846721 4184.90768 0.708834374 0.795542458 0.804701423 0.948030283 0.988019634 0.862836294 0.766944179 0.865598537 0.816468841 1 12.03098008 -1.522878792 0.027346707 1.465547779 1.66E-10 0.285080261 0.077591186 2850.598413 6.00910378 106.9620081 239.5079725 0.029999997 1.522878792 -1.465547779 LFLINEQS(ph)PR ddPTM_A459_MK2206_30min_R2 1 LFLINEQSPR 10 0 E9PFF8;Q6NW34-2;Q6NW34 E9PFF8 C3orf17 Uncharacterized protein C3orf17 1 LFLINEQS(1)PR 88.338 0.037682 0 12183 11882 10077 13878 11167 11055 15764 10263 9180.3 12080 TRUE FALSE 13115.73985 11291.95716 10412.96215 12744.12301 10728.52747 11475.70577 13694.16786 11604.40934 9978.7859 11685.83059 1.122362655 0.966294785 0.891075912 1.090562019 0.918080011 0.982018838 1.171860893 0.993032481 0.853921835 1 13.51247266 -4.755430256 24.81720007 0.988974074 1.122362895 0.178527208 0.087930425 344.7166252 1423498.024 0.022197312 0.196866466 1.76E-05 4.755430256 0.133388821 LFPADT(ph)SPSTATK ddPTM_A459_MK2206_30min_R1 2 LFPADTSPSTATK 13 0 Q6NZY4;Q6NZY4-2 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 LFPADT(0.681)S(0.152)PS(0.045)T(0.122)ATK;LFPADT(0.797)S(0.203)PSTATK 168.89 0.00062743 137508000 13503.3 13085.1 12452.4 11181 11883.1 10487.4 12369.8 10991.2 11072.6 9259.2 TRUE FALSE 12354.77343 12233.25761 11607.16578 12042.16256 11409.77096 11081.18752 11544.63321 10895.1051 12223.63639 10406.2996 1.187239836 1.175562696 1.115398002 1.157199295 1.096429221 1.064853786 1.109388895 1.046972076 1.174638139 1 13.34516953 -1.522878745 0.094058572 0.961581292 1.580953815 0.522340615 0.040839863 115.3774553 0.778821426 0.634268745 9.213071329 0.03 1.522878745 0.619372523 LFPADT(ph)SPSTATK ddPTM_A459_MK2206_30min_R2 4 LFPADTSPSTATK 13 0 Q6NZY4;Q6NZY4-2 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 LFPADT(0.487)S(0.487)PS(0.019)T(0.006)ATK;LFPADT(0.493)S(0.493)PS(0.01)T(0.003)ATK;LFPADT(0.708)S(0.282)PS(0.007)T(0.002)ATK;LFPADT(0.499)S(0.499)PS(0.002)TATK 143.56 0.001674 137977500 235609 246070 239057 271906 255493 221085 274504 202623 189750 246202 TRUE FALSE 253647.4062 233850.5216 247027.0411 249690.41 245461.0611 229498.5446 238461.2951 229106.5218 206254.112 238168.4489 1.064991637 0.98187028 1.03719465 1.048377361 1.030619556 0.963597595 1.001229576 0.961951606 0.866000988 1 17.86162278 -7.276453933 1.129789848 0.937298349 1.030619066 0.455959399 0.040230141 0.451924979 1.119375481 0.027315448 0.015338633 5.29E-08 7.276453933 0.093320717 LFPADTS(ph)PSTATK ddPTM_A459_MK2206_30min_R1 2 LFPADTSPSTATK 13 0 Q6NZY4;Q6NZY4-2 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 LFPADT(0.309)S(0.619)PS(0.019)T(0.053)ATK;LFPADT(0.048)S(0.949)PS(0.003)TATK 180.95 0.00011365 171817000 11807.1 11766.3 12065.8 10297.1 11562.4 9845.4 11279.1 11143 10514.9 9474.8 TRUE FALSE 10802.84414 11000.31173 11246.80711 11090.18443 11101.84512 10402.83804 10526.69182 11045.57793 11607.96148 10648.60976 1.014483993 1.033027971 1.056176099 1.041467824 1.042562868 0.976919831 0.988550812 1.037278873 1.090091735 1 13.37837747 LFPDT(ph)PLALDANK ddPTM_A459_MK2206_30min_R1 1 LFPDTPLALDANK 13 0 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 LFPDT(1)PLALDANK 218.45 3.80E-08 17468000 7908.7 8239 7704 6667.2 6732.9 6445.7 7232.2 7438.6 6112 5853.8 TRUE FALSE 7236.023535 7702.639602 7181.073945 7180.708899 6464.714336 6810.649964 6749.753134 7373.565104 6747.364272 6579.012938 1.099864615 1.170789551 1.091512361 1.091456875 0.982626786 1.035208477 1.025952251 1.120770726 1.025589148 1 12.68365543 -5.825726183 2.296390497 1.038109678 1.131646797 0.502147961 0.039846676 0.252284216 2.71301101 0.012142424 0.021542773 1.49E-06 5.825726183 0.093537119 LFPDT(ph)PLALDANK ddPTM_A459_MK2206_30min_R2 2 LFPDTPLALDANK 13 0 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 LFPDT(1)PLALDANK;LFPDT(1)PLALDANK 118.52 0.0079682 10140100 25152.9 30614 25018.1 26224 28038 21162.2 31822.7 18827.9 18730.5 23567.4 TRUE FALSE 27078.62536 29093.75328 25852.19097 24081.41531 26937.08724 21967.54235 27644.34126 21288.77118 20359.64503 22798.39767 1.187742479 1.276131494 1.133947716 1.056276659 1.18153423 0.963556416 1.212556324 0.933783658 0.893029647 1 14.47664481 -6.308822784 0.399932188 0.946241996 1.276001472 0.484531316 0.090125501 1.614372938 0.460674819 0.089550695 0.225869809 4.91E-07 6.308822784 0.329759476 LFPDT(ph)PLALDANKK ddPTM_A459_MK2206_30min_R1 2 LFPDTPLALDANKK 14 1 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 LFPDT(1)PLALDANKK;LFPDT(1)PLALDANKK 105.39 0.0073082 45254000 12208.1 12925.9 13545 11067.7 11212 10164.1 11703.3 12433.2 11294.7 10460 TRUE FALSE 11169.73699 12084.42156 12625.60314 11920.13617 10765.4023 10739.58256 10922.59421 12324.49784 12468.82448 11755.86377 0.950141751 1.027948418 1.073983451 1.013973657 0.915747452 0.913551124 0.929118815 1.04837025 1.060647242 1 13.52109293 -7.788495796 24.82116325 1.040881625 0.977638378 0.228909608 0.051283208 358.9265899 329268.6038 0.032244108 0.015496131 1.63E-08 7.788495796 -0.063243247 LFPEFDDS(ph)DYDEVPEEGPGAPAR ddPTM_A459_MK2206_30min_R1 2 LFPEFDDSDYDEVPEEGPGAPAR 23 0 Q96P48-3;Q96P48 Q96P48-3 ARAP1 "Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1" 1 LFPEFDDS(1)DYDEVPEEGPGAPAR;LFPEFDDS(1)DYDEVPEEGPGAPAR 137.24 3.02E-06 3050100 1526.89 1523.08 1509.68 1483.24 1725.38 1518.53 1703.73 1818.52 1340.52 1471.14 TRUE FALSE 1397.019987 1423.927215 1407.207128 1597.479402 1656.654461 1604.507856 1590.07728 1802.620871 1479.871851 1653.39593 0.844939777 0.861213693 0.85110112 0.9661808 1.001970811 0.97043172 0.96170388 1.090253604 0.895049894 1 10.69121653 -5.809591823 4.18444687 0.988564374 0.852006109 0.637754638 0.045473042 0.12361536 4.514741358 0.012308701 0.019630301 1.55E-06 5.809591823 -0.136558265 LFPHRNS(ph)SK ddPTM_A459_MK2206_30min_R1 1 LFPHRNSSK 9 1 E7EPB6;P13569-2;P13569 E7EPB6 CFTR Cystic fibrosis transmembrane conductance regulator 1 LFPHRNS(0.5)S(0.5)K 75.38 0.032572 13422000 3532.7 4134.4 3737 3333.2 3946.7 3803 3999.7 4143.4 3570.1 3267.2 TRUE FALSE 3232.225314 3865.249809 3483.342852 3589.923642 3789.494582 4018.322574 3732.887311 4107.174691 3941.224671 3671.965402 0.880243946 1.052637862 0.948631719 0.977657262 1.032007159 1.094324737 1.01659109 1.118522165 1.073328378 1 11.84233675 -6.368848118 2.971403475 1.065250188 0.968869334 0.440260767 0.050803208 0.24771611 4.209189647 0.015924879 0.018544272 4.28E-07 6.368848118 -0.096380853 LFQECCPHSTDR ddPTM_A459_MK2206_30min_R1 1 LFQECCPHSTDR 12 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 164.11 0.00071249 16347000 3398.5 1872.9 2560.7 1877.8 4372.4 3710.5 3552.1 3283.6 1781.7 1903.1 FALSE TRUE 3109.439729 1750.97387 2386.886819 2022.428481 4198.238049 3920.585303 3315.14589 3254.891831 1966.914091 2138.870396 1.453776599 0.818644212 1.115956733 0.945559154 1.962829565 1.83301677 1.549951739 1.521780767 0.919604149 1 11.06263335 -6.228714699 24.94444832 1.513315056 1.066886451 0.224575206 0.339132425 855.0044413 651728.5886 0.101137435 0.130558641 5.91E-07 6.228714699 -0.446428605 LFQECCPHSTDR ddPTM_A459_MK2206_30min_R2 4 LFQECCPHSTDR 12 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ;;; 163.71 0.0007073 75968000 155973 259427 192548 310219 309838 362775 292952 208120 289202 212149 FALSE TRUE 167914.4128 246544.2324 198967.4542 284873.1154 297672.2033 376580.6568 254487.0505 235321.9986 314356.2672 205226.5955 0.818190315 1.201326913 0.969501315 1.388090635 1.450456275 1.834950562 1.240029587 1.146644751 1.531752093 1 17.64685818 -5.766420357 24.64396091 1.393660598 1.016838219 0.351487193 0.230735504 111.9692455 553985.1325 0.065039115 0.100007921 1.71E-06 5.766420357 -0.376822379 LFQLGPPS(ph)PVK ddPTM_A459_MK2206_30min_R1 2 LFQLGPPSPVK 11 0 Q9NZH5-2;Q9NZH5;O95997 Q9NZH5-2 PTTG2;PTTG1 Securin-2;Securin 1 LFQLGPPS(1)PVK;LFQLGPPS(1)PVK 145.71 0.00069703 218050000 13971.7 15218.6 16183.5 11463.5 11101.7 12553.1 15996.8 11919.3 15462.6 16178.9 TRUE FALSE 12783.33355 14227.86637 15085.00911 12346.42076 10659.49578 13263.84567 14929.68266 11815.09082 17069.9926 18183.26428 0.70302743 0.782470417 0.829609518 0.678999137 0.586225642 0.729453495 0.821067243 0.649778315 0.938774928 1 14.1503236 -8.386893233 4.750229122 0.995718507 0.726091422 0.655803231 0.07192568 0.140384141 4.484075181 0.073225908 0.019142202 4.10E-09 8.386893233 -0.269627085 LFQLGPPS(ph)PVK ddPTM_A459_MK2206_30min_R2 1 LFQLGPPSPVK 11 0 Q9NZH5-2;Q9NZH5;O95997 Q9NZH5-2 PTTG2;PTTG1 Securin-2;Securin 1 LFQLGPPS(1)PVK 116.63 0.005831 104610000 61876 57757 58207 51309 57343 43480 63792 54407 42384 57252 TRUE FALSE 66613.27413 54888.87137 60147.59233 47116.89057 55091.42569 45134.66187 55416.03377 61518.18171 46070.48371 55383.87193 1.202755817 0.99106237 1.086012773 0.850733055 0.99471965 0.814942334 1.000580708 1.110759858 0.831839344 1 15.7571783 LFRPPS(ph)PAPAAPGAR ddPTM_A459_MK2206_30min_R1 2 LFRPPSPAPAAPGAR 15 1 Q86U90 Q86U90 YRDC "YrdC domain-containing protein, mitochondrial" 1 LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR 87.088 0.010459 323290000 6191.7 6322.8 6106.2 5746.6 6408.1 6213.3 6878.6 5912.1 5033.9 5281.4 TRUE FALSE 5665.063401 5911.184571 5691.728157 6189.204128 6152.851808 6565.091677 6419.741145 5860.411133 5557.191919 5935.699705 0.954405324 0.995869883 0.958897593 1.042708431 1.036584078 1.106035009 1.081547495 0.987315974 0.936231985 1 12.53520239 -5.763371619 24.98959763 1.032614649 0.972338822 0.239081549 0.046221107 76.41994523 988359.7742 0.014133131 0.022216636 1.72E-06 5.763371619 -0.060275826 LFRPPS(ph)PAPAAPGAR ddPTM_A459_MK2206_30min_R2 2 LFRPPSPAPAAPGAR 15 1 Q86U90 Q86U90 YRDC "YrdC domain-containing protein, mitochondrial" 1 LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR 94.61 0.0062443 201170900 24693 41721 35519 33777 34737 37507 39533 30799 33048 40227 TRUE FALSE 26583.51507 39649.19581 36703.18573 31017.31105 33373.05084 38934.35517 34342.26961 34824.53505 35922.4553 38914.39628 0.683128035 1.01888246 0.94317757 0.7970652 0.85760166 1.000512892 0.882508092 0.894901075 0.923114804 1 15.24801635 -6.691034155 24.9999812 0.930038007 0.869926977 0.156462732 0.090172663 121.1230215 43006.93548 0.029596941 0.029596934 2.04E-07 6.691034155 -0.06011103 LFS(ph)DEDDR ddPTM_A459_MK2206_30min_R1 2 LFSDEDDR 8 0 H0Y322;Q5TKA1;Q5TKA1-2;B1B047 H0Y322 LIN9 Protein lin-9 homolog 1 LFS(1)DEDDR;LFS(1)DEDDR 157.34 0.00054282 4518400 5325.6 6148 6197.4 4100.4 3543.9 2567.9 3583 2869.6 4072.1 4473.9 TRUE FALSE 4872.629754 5747.764083 5776.737755 4416.213518 3402.738959 2713.292279 3343.984608 2844.51139 4495.409367 5028.160508 0.969068061 1.143114678 1.148876959 0.878296051 0.676736344 0.539619265 0.665051285 0.565716107 0.894046513 1 12.29581499 -5.998177501 3.246109621 0.691444159 1.091092577 0.563851586 0.141026672 0.15819879 3.47345675 0.041202972 0.060533283 1.00E-06 5.998177501 0.399648418 LFS(ph)PAHK ddPTM_A459_MK2206_30min_R1 1 LFSPAHK 7 0 Q8TAT5 Q8TAT5 NEIL3 Endonuclease 8-like 3 1 LFS(1)PAHK 69.812 0.045042 0 5273.9 5260.8 5141 4533.6 4674 4134 4418.3 4003.5 4288.5 3956 TRUE FALSE 4825.327111 4918.320964 4792.043244 4882.778658 4487.824683 4368.063507 4123.563269 3968.497822 4734.304922 4446.099146 1.085294536 1.106210366 1.077808453 1.098216323 1.009384752 0.982448516 0.927456436 0.892579695 1.064822166 1 12.1183244 -6.457385923 2.232154108 0.963022545 1.093386142 0.619439008 0.043486474 0.193550645 1.912718826 0.015266836 0.017156981 3.49E-07 6.457385923 0.130363597 LFS(ph)QGQDVSNK ddPTM_A459_MK2206_30min_R1 1 LFSQGQDVSNK 11 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 MLLT4 Afadin 1 LFS(0.964)QGQDVS(0.036)NK 87.363 0.036855 0 2050.9 1493.9 1760.1 1616.2 1991.2 1873.2 2148.1 2115.4 2678 2494.3 TRUE FALSE 1876.460185 1396.646838 1640.629316 1740.680004 1911.886288 1979.258965 2004.804168 2096.905281 2956.387683 2803.312715 0.669372409 0.498213 0.585246629 0.620936792 0.682009637 0.706042874 0.715155379 0.748009763 1.054605028 1 11.45291697 -7.918211329 0.828081281 1.039676476 0.599100586 0.834344663 0.067112825 0.229100807 0.300618883 0.062626662 0.026095857 1.21E-08 7.918211329 -0.440575889 LFS(ph)QGQDVSNK ddPTM_A459_MK2206_30min_R2 1 LFSQGQDVSNK 11 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 MLLT4 Afadin 1 LFS(0.983)QGQDVS(0.017)NK 84.62 0.036026 5537700 30738 30665 36704 26894 27424 28585 44540 45725 32453 47855 TRUE FALSE 33091.32491 29142.22069 37927.69304 24696.67417 26347.19597 29672.82221 38691.8445 51701.4145 35275.70328 46293.49527 0.714815866 0.629510054 0.819287738 0.533480439 0.569133867 0.64097174 0.835794409 1.116818123 0.762001294 1 15.49852187 -7.423788161 3.797971664 0.958488626 0.649552592 0.617003995 0.10985771 0.154881653 4.039669713 0.049055978 0.031101498 3.77E-08 7.423788161 -0.308936034 LFSLS(ph)NPSLSTTNLSGPSR ddPTM_A459_MK2206_30min_R1 1 LFSLSNPSLSTTNLSGPSR 19 0 Q6UUV7;Q6UUV7-3 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 LFS(0.027)LS(0.973)NPSLSTTNLSGPSR 292.65 1.28E-85 13830000 1531.3 1292.6 1215.8 1015.4 1473.5 1120.2 1474.5 1407.5 1276.1 1039.6 TRUE FALSE 1401.054894 1208.451505 1133.274883 1093.606284 1414.807375 1183.624756 1376.138795 1395.194376 1408.755162 1168.393497 1.199129316 1.03428469 0.96994282 0.935991417 1.210899735 1.01303607 1.177804224 1.194113439 1.20571979 1 10.19031052 -6.77594081 1.412208797 1.152069671 1.04136857 0.106875152 0.100708569 0.744202799 3.09732842 0.047273689 0.042213826 1.68E-07 6.77594081 -0.110701101 LFSLS(ph)NPSLSTTNLSGPSR ddPTM_A459_MK2206_30min_R2 2 LFSLSNPSLSTTNLSGPSR 19 0 Q6UUV7;Q6UUV7-3 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 LFSLS(0.995)NPS(0.003)LS(0.002)TTNLSGPSR;LFS(0.006)LS(0.895)NPS(0.092)LS(0.006)TTNLSGPSR 247.3 1.61E-37 23389000 38500 42891 39829 48621 42324 43783 43549 33024 37310 40796 TRUE FALSE 41447.5896 40761.09531 41156.87898 44648.50877 40662.1471 45449.19275 37830.96399 37340.35019 40555.15636 39464.82986 1.050241183 1.032846092 1.042874862 1.131349329 1.030338842 1.151637874 0.958599445 0.946167773 1.027627802 1 15.26827991 -7.289103881 24.9866825 0.978612724 1.070694268 0.507521815 0.043355856 603.9419967 545480.1024 0.017832381 0.01202543 5.14E-08 7.289103881 0.092081544 LFSLSNPS(ph)LSTTNLSGPSR ddPTM_A459_MK2206_30min_R1 1 LFSLSNPSLSTTNLSGPSR 19 0 Q6UUV7;Q6UUV7-3 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 LFS(0.003)LS(0.025)NPS(0.536)LS(0.418)T(0.014)T(0.004)NLSGPSR 205.98 2.68E-16 17788000 2891.9 2262.9 1893.8 1670.6 2879 2241.3 2898.7 2140.6 2195.2 2133.6 TRUE FALSE 2645.928719 2115.584799 1765.254132 1799.269901 2764.323334 2368.200469 2705.333012 2121.88496 2423.398896 2397.926476 1.103423623 0.882255907 0.736158573 0.750344066 1.152797369 0.987603454 1.128196815 0.884883244 1.010622686 1 11.22757171 -6.25744655 24.96123945 1.02464971 0.859640075 0.308188258 0.116614964 440.3757264 2753013.668 0.036362619 0.045210803 5.53E-07 6.25744655 -0.165009634 LFVGGIKEDTEEHHLR ddPTM_A459_MK2206_30min_R1 4 LFVGGIKEDTEEHHLR 16 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;; 115.24 0.0013786 44272000 15440.1 15521.5 16008.5 17279.1 18624.1 15204.3 13502.7 17248.3 9118.2 5282.06 FALSE TRUE 14126.83842 14511.04753 14921.88762 18609.93928 17882.26266 16065.15433 12601.95952 17097.49993 10066.06952 5936.44147 2.379681243 2.444401684 2.513608143 3.134864442 3.012286527 2.706192659 2.12281374 2.880092395 1.695640321 1 12.53538267 -8.472673447 3.248163485 1.005134654 2.6499118 0.773658446 0.29274086 0.105323977 2.409371129 0.302027556 0.080279483 3.37E-09 8.472673447 1.644777145 LFVLLPEQS(ph)PVSYSK ddPTM_A459_MK2206_30min_R1 1 LFVLLPEQSPVSYSK 15 0 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 LFVLLPEQS(0.999)PVS(0.001)YSK 197.73 2.74E-05 17511000 12073 11478 11350 9467.8 10759 10415 11035 9743 10195 9906.3 TRUE FALSE 11046.12795 10730.78011 10579.59362 10197.0116 10330.44625 11004.6883 10298.87528 9657.817978 11254.80673 11133.56723 0.992146337 0.963822276 0.950242937 0.915880004 0.9278649 0.988424291 0.925029244 0.867450456 1.010889547 1 13.44262829 -4.919181354 2.018500776 0.942107947 0.998462421 0.082804831 0.041269322 1.16159068 6.569449005 0.010893303 0.110539242 1.20E-05 4.919181354 0.056354474 LFVT(ph)PPEGSSR ddPTM_A459_MK2206_30min_R1 1 LFVTPPEGSSR 11 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LFVT(0.868)PPEGS(0.12)S(0.012)R 140.63 0.0025036 46313000 5045.6 4421 4448 3874.4 4078.9 3615.6 4353.4 3933.4 4093.9 3736.3 TRUE FALSE 4616.445224 4133.192096 4146.082153 4172.806959 3916.428776 3820.312147 4062.992629 3899.010698 4519.475555 4199.181052 1.099367988 0.98428528 0.987354939 0.99371923 0.9326649 0.909775525 0.967567861 0.92851693 1.076275469 1 12.03589228 LFVTPPEGSS(ph)R ddPTM_A459_MK2206_30min_R1 1 LFVTPPEGSSR 11 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LFVT(0.058)PPEGS(0.164)S(0.779)R 87.641 0.031769 9938500 3822.1 3536 3117.1 2713.4 3761.1 2947.6 3407.9 3194.7 2639.2 2725.4 TRUE FALSE 3497.010324 3305.805757 2905.519937 2922.386538 3611.287423 3114.490565 3180.565209 3166.769075 2913.554284 3063.043128 1.141678448 1.079255374 0.948572976 0.954079462 1.178986802 1.016796184 1.038367753 1.033863691 0.951195972 1 11.58074996 -5.001170875 5.654959117 1.020387359 1.129547715 0.283401573 0.06372891 0.199422194 24.30845298 0.016618085 0.058157605 9.97E-06 5.001170875 0.109160356 LFYLALPPTVYEAVTK ddPTM_A459_MK2206_30min_R1 2 LFYLALPPTVYEAVTK 16 0 P11413-3;P11413;P11413-2;E7EUI8;E9PD92;E7EM57 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 178.1 1.56E-05 26459000 5822.5 6212 6421.2 6669.7 6145.7 6113.9 5577 5908.6 4397.8 5484.4 FALSE TRUE 5327.2658 5807.597671 5985.346834 7183.40145 5900.903755 6460.063734 5204.968506 5856.941733 4854.967048 6163.848877 0.864275862 0.942203124 0.97104049 1.165408431 0.957340758 1.048056801 0.844434802 0.950208522 0.787651862 1 12.58961578 -7.263624984 24.98490312 0.891424507 0.994589509 0.210945458 0.090513457 305.306792 3490103.262 0.03691017 0.026273321 5.45E-08 7.263624984 0.103165002 LGADES(ph)EEEGR ddPTM_A459_MK2206_30min_R2 1 LGADESEEEGR 11 0 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 LGADES(1)EEEGR 92.247 0.025278 4652300 19943 24457 19260 18950 27722 27707 20240 14592 14852 13027 TRUE FALSE 21469.85141 23242.50094 19902.11879 17401.72438 26633.49499 28761.4093 17582.46369 16499.2245 16143.80011 12601.93006 1.703695491 1.844360415 1.579291323 1.380877715 2.113445708 2.282301931 1.395219907 1.30926171 1.281057746 1 13.62135709 -7.499520229 18.94813195 1.247540967 1.804476774 0.559676877 0.251372286 30.57191388 24800.65225 0.11577207 0.076985064 3.17E-08 7.499520229 0.556935807 LGADES(ph)EEEGRR ddPTM_A459_MK2206_30min_R1 1 LGADESEEEGRR 12 1 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 LGADES(1)EEEGRR 116.03 0.011906 0 3964.5 4541 4753.1 3569.2 4511.8 4252.5 4523.4 4094.5 3546 3947.3 TRUE FALSE 3627.298457 4245.380075 4430.472815 3844.100402 4332.085452 4493.272875 4221.652239 4058.702218 3914.619389 4436.321325 0.817636549 0.956959554 0.998681676 0.866506306 0.976503985 1.012837562 0.951611015 0.914880127 0.882402131 1 12.11514815 -4.759624751 24.93220979 0.950067749 0.817636377 0.417776713 0.047270146 47.28031861 649422.7868 0.011989519 0.07512787 1.74E-05 4.759624751 -0.132431372 LGAES(ph)PSIASTSSTEK ddPTM_A459_MK2206_30min_R1 3 LGAESPSIASTSSTEK 16 0 Q99569-2;Q99569;A0A0D9SF60;H0YFB1;E7EST6 Q99569-2 PKP4 Plakophilin-4 1 LGAES(0.996)PS(0.004)IASTSSTEK;LGAES(0.956)PS(0.044)IASTSSTEK;LGAES(0.872)PS(0.128)IASTSSTEK 251.28 1.73E-29 40341800 5256 4686.1 4587.9 4462.8 5046.9 4696.7 5358.6 5061.8 4722.1 4422.8 TRUE FALSE 4808.9496 4381.034038 4276.486131 4806.525629 4845.871286 4962.623095 5001.137571 5017.545216 5212.979193 4970.729854 0.96745342 0.881366352 0.860333644 0.966965772 0.97488124 0.998369101 1.006117355 1.009418207 1.048735165 1 12.27924198 -6.211536954 1.674378786 1.01222695 0.902545331 0.679923598 0.031329555 0.212846412 1.181871926 0.011309952 0.015790181 6.14E-07 6.211536954 -0.109681619 LGAES(ph)PSIASTSSTEK ddPTM_A459_MK2206_30min_R2 4 LGAESPSIASTSSTEK 16 0 Q99569-2;Q99569;A0A0D9SF60;H0YFB1;E7EST6 Q99569-2 PKP4 Plakophilin-4 1 LGAES(0.542)PS(0.358)IAS(0.068)T(0.017)S(0.006)S(0.004)T(0.005)EK;LGAES(0.8)PS(0.175)IAS(0.025)TSSTEK;LGAES(0.904)PS(0.096)IASTSSTEK;LGAES(0.805)PS(0.191)IAS(0.004)TSSTEK 197.29 9.63E-07 52963600 137563 143549 148229 140376 144231 129493 163605 134834 142134 144785 TRUE FALSE 148094.929 136420.5654 153170.8809 128906.8318 138567.7662 134420.9469 142123.467 152457.2668 154496.5584 140060.6773 1.057362651 0.974010465 1.093603742 0.92036419 0.989340969 0.959733663 1.014727829 1.088508707 1.103068765 1 17.09569244 -7.64858082 5.196112123 1.07130761 0.997450072 0.231009473 0.05221137 0.267901299 11.06097494 0.024914305 0.013956425 2.25E-08 7.64858082 -0.073857538 LGAGEGGEASVS(ph)PEK ddPTM_A459_MK2206_30min_R1 6 LGAGEGGEASVSPEK 15 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LGAGEGGEAS(0.214)VS(0.786)PEK;LGAGEGGEAS(0.008)VS(0.992)PEK;LGAGEGGEAS(0.001)VS(0.999)PEK;LGAGEGGEAS(0.052)VS(0.948)PEK;LGAGEGGEAS(0.011)VS(0.989)PEK;LGAGEGGEAS(0.002)VS(0.998)PEK 207.66 1.78E-06 1120945000 29981.4 35482.3 34707.4 25784.4 21568.2 19342.6 27942.3 23003.3 36716.2 40860.5 TRUE FALSE 27431.32449 33172.39582 32351.55839 27770.31896 20709.09292 20437.7613 26078.32015 22802.18457 40532.98038 45922.60722 0.597338134 0.722354366 0.704480001 0.604719998 0.450956385 0.44504793 0.567875426 0.496535061 0.882636741 1 15.48691693 -8.400322983 4.10793284 0.994266328 0.576016032 0.734299879 0.089501554 0.125589617 3.33717644 0.099264193 0.026107424 3.98E-09 8.400322983 -0.418250296 LGAGEGGEASVS(ph)PEK ddPTM_A459_MK2206_30min_R2 6 LGAGEGGEASVSPEK 15 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LGAGEGGEAS(0.021)VS(0.979)PEK;LGAGEGGEAS(0.075)VS(0.925)PEK;LGAGEGGEAS(0.001)VS(0.999)PEK;LGAGEGGEAS(0.001)VS(0.999)PEK;LGAGEGGEAS(0.007)VS(0.993)PEK;LGAGEGGEAS(0.007)VS(0.993)PEK 203.2 1.03E-05 994944000 1331976 964263 1146600 972581 907143 677116 1245073 977568 725421 1270637 TRUE FALSE 1433953.107 916379.1016 1184827.072 893118.0212 871524.0078 702884.1239 1081593.419 1105339.494 788516.8073 1229176.219 1.166596851 0.745522967 0.963919618 0.726598845 0.709030971 0.571833487 0.879933571 0.899252261 0.641500214 1 20.22926033 -2.826502262 1.600816259 0.780834182 199.9962487 0.391927602 0.135527223 734.0552905 4.708608736 0.037092455 534471.1619 0.001491069 2.826502262 199.2154145 LGAGEGGEASVS(ph)PEKTSTTSK ddPTM_A459_MK2206_30min_R1 7 LGAGEGGEASVSPEKTSTTSK 21 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LGAGEGGEAS(0.051)VS(0.939)PEKT(0.007)S(0.003)TTSK;LGAGEGGEAS(0.003)VS(0.988)PEKT(0.006)S(0.002)T(0.001)TSK;LGAGEGGEAS(0.007)VS(0.992)PEKTSTTSK;LGAGEGGEAS(0.045)VS(0.418)PEKT(0.39)S(0.133)T(0.009)T(0.003)S(0.001)K;LGAGEGGEASVS(0.798)PEKT(0.136)S(0.044)T(0.015)T(0.005)S(0.002)K;LGAGEGGEAS(0.001)VS(0.879)PEKT(0.079)S(0.027)T(0.009)T(0.003)S(0.001)K;LGAGEGGEAS(0.049)VS(0.896)PEKT(0.031)S(0.01)T(0.01)T(0.003)S(0.001)K 115.5 4.24E-05 983376700 27296.4 34194.4 31454.2 29324.7 22513.5 17657.8 20941.8 24437.9 19291.7 15379.9 TRUE FALSE 24974.69784 31968.33834 29319.17654 31583.29348 21616.73962 18657.56938 19544.81073 24224.24202 21297.14125 17285.27812 1.444853688 1.84945467 1.696193508 1.827178785 1.25058674 1.079390753 1.130720061 1.401437792 1.232097112 1 14.0772562 -6.320018635 5.994311226 1.191151022 1.713775963 0.761653084 0.143110494 0.106694602 8.1998596 0.044385803 0.050759991 4.79E-07 6.320018635 0.522624941 LGAGEGGEASVS(ph)PEKTSTTSK ddPTM_A459_MK2206_30min_R2 3 LGAGEGGEASVSPEKTSTTSK 21 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LGAGEGGEAS(0.033)VS(0.916)PEKT(0.024)S(0.009)T(0.012)T(0.004)S(0.002)K;LGAGEGGEAS(0.003)VS(0.837)PEKT(0.121)S(0.013)T(0.018)T(0.005)S(0.002)K;LGAGEGGEAS(0.009)VS(0.978)PEKT(0.005)S(0.002)T(0.002)T(0.002)S(0.001)K 68.916 0.0040491 1051640000 295564 442410 379421 363350 439726 299445 442619 335621 413400 412521 TRUE FALSE 318192.6071 420440.5627 392070.7068 333663.1427 422460.1478 310840.5893 384502.5936 379487.8171 449356.7847 399060.4736 0.797354356 1.053576063 0.982484442 0.836121753 1.058636913 0.778931039 0.963519614 0.950953157 1.126036815 1 18.60624786 -8.123729596 5.61426082 1.061540403 0.929684223 0.241673507 0.096407497 0.31819218 12.96714429 0.063982615 0.023419818 7.52E-09 8.123729596 -0.13185618 LGAGGGS(ph)PEK ddPTM_A459_MK2206_30min_R1 2 LGAGGGSPEK 10 0 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(1)PEK;LGAGGGS(1)PEK 89.266 0.031084 96234000 14924.2 17221.8 15720.3 13307.5 9935 9113.1 13556.4 12509.7 10512.6 19058.1 TRUE FALSE 13654.81842 16100.65769 14653.24984 14332.44596 9539.267912 9629.075847 12652.07729 12400.32901 11605.42239 21419.16131 0.637504813 0.751694124 0.684118749 0.669141324 0.445361411 0.44955429 0.590689668 0.578936254 0.541824314 1 14.38661437 -10.68723142 10.61972811 1.000000001 0.594587372 0.631468773 0.092976163 1.36E-09 1.44E-10 0.102900267 0.024956981 2.05E-11 10.68723142 -0.405412628 LGAGGGS(ph)PEK ddPTM_A459_MK2206_30min_R2 2 LGAGGGSPEK 10 0 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(1)PEK;LGAGGGS(1)PEK 101.35 0.016452 135829000 964920 694040 748420 643790 597990 395210 779420 607180 407260 863410 TRUE FALSE 1038795.017 659574.9828 773371.9493 591190.2976 574509.9079 410249.9935 677081.2177 686540.5108 442682.7386 835237.0024 1.243712879 0.789686018 0.925931139 0.707811431 0.687840585 0.491177944 0.81064562 0.8219709 0.530008533 1 19.6718261 -1.714840393 0.922550029 0.714996753 199.9999987 0.493550409 0.149748271 561.0006101 1.669593251 0.047976636 234855.5167 0.019282334 1.714840393 199.2850019 LGAGGGS(ph)PEKSPSAQELK ddPTM_A459_MK2206_30min_R1 1 LGAGGGSPEKSPSAQELK 18 1 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(0.985)PEKS(0.005)PS(0.01)AQELK 179.81 7.05E-09 3811700 1115.1 1200.2 1198.4 1355.6 816.97 729.95 823.99 902.52 1109.4 959.74 TRUE FALSE 1020.254889 1122.066762 1117.055947 1460.008547 784.4283549 771.2791382 769.0231306 894.6293628 1224.7261 1078.639837 0.945871694 1.040260821 1.035615327 1.353564459 0.727238442 0.715047889 0.712956359 0.829405082 1.135435628 1 10.07499751 -6.287994871 24.99477974 0.830882973 1.085843869 0.346753711 0.15977767 830.0948145 781306.3516 0.051190566 0.058060952 5.15E-07 6.287994871 0.254960896 LGAGGGS(ph)PEKSPSAQELK ddPTM_A459_MK2206_30min_R2 4 LGAGGGSPEKSPSAQELK 18 1 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(0.886)PEKS(0.096)PS(0.017)AQELK;LGAGGGS(0.998)PEKS(0.002)PSAQELK;LGAGGGS(0.993)PEKS(0.007)PSAQELK;LGAGGGS(0.998)PEKS(0.002)PSAQELK 163.91 1.35E-05 499153000 103359.8 113031.2 112027.9 96635.6 110546.6 75297.2 121741.9 96809.6 81922.9 116395.1 TRUE FALSE 111273.1058 107418.235 115762.8543 88740.16236 106205.985 78162.68771 105757.0423 109462.9471 89048.40576 112597.1374 0.988240983 0.954005026 1.028115429 0.788120945 0.943238767 0.694180061 0.939251607 0.972164565 0.790858523 1 16.78081062 -5.747885914 24.98867421 0.872178259 0.986508943 0.246722939 0.091671487 329.8009907 608052.4562 0.024123512 0.041487452 1.79E-06 5.747885914 0.114330685 LGAGGGSPEKSPS(ph)AQELK ddPTM_A459_MK2206_30min_R1 3 LGAGGGSPEKSPSAQELK 18 1 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(0.246)PEKS(0.051)PS(0.703)AQELK;LGAGGGSPEKS(0.003)PS(0.997)AQELK;LGAGGGS(0.015)PEKS(0.366)PS(0.619)AQELK 136.81 0.0016534 490792000 6430.4 7383.3 7869.1 6753.1 5784.2 5151 6226.8 6608 6597.4 6133.4 TRUE FALSE 5883.460713 6902.645828 7334.967417 7273.224932 5553.803066 5442.645169 5811.421533 6550.226953 7283.223339 6893.251897 0.853510187 1.001362772 1.064079411 1.055122465 0.805686946 0.789561335 0.843059505 0.950237573 1.056572928 1 12.75096902 -4.733590778 23.4206789 0.943899864 0.853509137 0.075834443 0.099544042 4668.637642 3925860.124 0.027945309 2.266388983 1.85E-05 4.733590778 -0.090390727 LGAGGGSPEKSPS(ph)AQELK ddPTM_A459_MK2206_30min_R2 2 LGAGGGSPEKSPSAQELK 18 1 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(0.01)PEKS(0.106)PS(0.883)AQELK;LGAGGGS(0.001)PEKS(0.245)PS(0.754)AQELK 82.942 0.0050456 25846000 107112 104700 104670 100810 100948 65439 107298 83542 85037 93449 TRUE FALSE 115312.5771 99500.75025 108159.6456 92573.50052 96984.2743 67929.327 93209.64371 94461.22624 92433.36455 90399.76678 1.275584896 1.100674856 1.196459343 1.024045789 1.07283766 0.751432547 1.03108279 1.044927765 1.022495609 1 16.46403143 -5.878016319 1.782669975 0.978371035 1.192643828 0.489676378 0.092825814 0.31726974 2.054672312 0.03041034 0.055996088 1.32E-06 5.878016319 0.214272793 LGAPENSGIST(ph)LER ddPTM_A459_MK2206_30min_R1 4 LGAPENSGISTLER 14 0 C9JME2;Q9Y4F1;Q9Y4F1-2;A0A1B0GV68;M0QYB0;Q9Y4F1-3 C9JME2 FARP1 "FERM, RhoGEF and pleckstrin domain-containing protein 1" 1 LGAPENSGIS(0.008)T(0.992)LER;LGAPENSGIS(0.001)T(0.999)LER;LGAPENSGIS(0.028)T(0.972)LER;LGAPENSGIS(0.08)T(0.92)LER 180.56 0.00017278 146371000 22293.2 20144.8 18151.9 16673.3 20483.9 19129.1 21720.6 20146.6 18984.8 18773 TRUE FALSE 20397.04627 18833.36986 16919.7996 17957.48045 19667.98289 20212.17311 20271.65841 19970.4604 20958.3379 21098.74097 0.966742343 0.892630034 0.801934088 0.85111621 0.932187514 0.957980059 0.960799435 0.946523796 0.993345429 1 14.36486929 -6.496006734 3.260776253 0.967254213 0.874137377 0.528865036 0.041349641 0.217464587 4.741242298 0.014918361 0.016154219 3.19E-07 6.496006734 -0.093116836 LGAPENSGIST(ph)LER ddPTM_A459_MK2206_30min_R2 3 LGAPENSGISTLER 14 0 C9JME2;Q9Y4F1;Q9Y4F1-2;A0A1B0GV68;M0QYB0;Q9Y4F1-3 C9JME2 FARP1 "FERM, RhoGEF and pleckstrin domain-containing protein 1" 1 LGAPENSGIS(0.081)T(0.919)LER;LGAPENSGIS(0.031)T(0.969)LER;LGAPENSGIS(0.028)T(0.972)LER 172.32 0.00029196 71994700 93681 76195 77726 82380 69836 93427 92170 64458 103258 80015 TRUE FALSE 100853.2894 72411.2671 80317.34605 75649.29048 67093.88774 96982.42995 80067.96828 72882.88192 112239.1942 77404.1171 1.302944768 0.935496325 1.037636615 0.977329027 0.866799988 1.252936324 1.034414851 0.941589216 1.450041657 1 16.24012268 -6.769034763 24.99992066 1.125809349 1.017282337 0.094458309 0.170983452 462.4268149 1522051.137 0.058086009 0.052210891 1.70E-07 6.769034763 -0.108527011 LGAQT(ph)PVGVSTLEPGQTLLPR ddPTM_A459_MK2206_30min_R1 1 LGAQTPVGVSTLEPGQTLLPR 21 0 O94887-3;O94887-2;O94887;C9JWM9;C9JVQ5 O94887-3 FARP2 "FERM, RhoGEF and pleckstrin domain-containing protein 2" 1 LGAQT(0.518)PVGVS(0.393)T(0.083)LEPGQT(0.006)LLPR 66.246 0.022092 11894000 3542.8 3107.6 2524 2361.6 3032.8 2736.9 2730.8 2492.4 2348.2 2421 TRUE FALSE 3241.466256 2905.294675 2352.677912 2543.490841 2911.997154 2891.860913 2548.633315 2470.60921 2592.303793 2720.931758 1.191307443 1.067757274 0.864658919 0.934786708 1.070220576 1.062820082 0.936676676 0.908001166 0.952726501 1 11.40988506 -4.954251718 3.989869222 0.967450842 1.181771154 0.568269694 0.061403855 0.172942045 5.694441702 0.017214694 0.081028732 1.11E-05 4.954251718 0.214320312 LGAQT(ph)PVGVSTLEPGQTLLPR ddPTM_A459_MK2206_30min_R2 1 LGAQTPVGVSTLEPGQTLLPR 21 0 O94887-3;O94887-2;O94887;C9JWM9;C9JVQ5 O94887-3 FARP2 "FERM, RhoGEF and pleckstrin domain-containing protein 2" 1 LGAQT(1)PVGVSTLEPGQTLLPR 155.54 4.70E-07 5981800 16930 16431 16045 15959 14404 15292 15861 13886 15054 13560 TRUE FALSE 18226.17382 15615.06043 16579.93229 14655.09865 13838.42659 15873.94778 13778.43165 15700.94788 16363.36971 13117.53831 1.389450778 1.190395642 1.263951505 1.117214092 1.054956064 1.210131612 1.050382421 1.196943169 1.247442113 1 13.67920938 -1.522887074 0.757801522 1.134200739 47.56161049 0.470207027 0.081352665 355.7669882 1.486211121 0.029508266 28224.29573 0.029999425 1.522887074 46.42740975 LGAQTPVGVSTLEPGQT(ph)LLPR ddPTM_A459_MK2206_30min_R1 1 LGAQTPVGVSTLEPGQTLLPR 21 0 O94887-3;O94887-2;O94887;C9JWM9;C9JVQ5 O94887-3 FARP2 "FERM, RhoGEF and pleckstrin domain-containing protein 2" 1 LGAQT(0.119)PVGVS(0.001)TLEPGQT(0.88)LLPR 162.31 1.44E-07 9820900 3137.3 2300.9 1876.8 1749.8 2438.7 2328.2 2474.8 2136.5 2096.2 2114.8 TRUE FALSE 2870.45616 2151.110992 1749.408045 1884.569899 2341.561415 2460.020672 2309.710608 2117.820806 2314.107491 2376.79739 1.207699139 0.905046009 0.736035832 0.79290305 0.98517502 1.035014883 0.971774295 0.891039688 0.973624214 1 11.21480321 LGAQTPVGVSTLEPGQT(ph)LLPR ddPTM_A459_MK2206_30min_R2 3 LGAQTPVGVSTLEPGQTLLPR 21 0 O94887-3;O94887-2;O94887;C9JWM9;C9JVQ5 O94887-3 FARP2 "FERM, RhoGEF and pleckstrin domain-containing protein 2" 1 LGAQT(0.007)PVGVS(0.001)T(0.002)LEPGQT(0.99)LLPR;LGAQT(0.115)PVGVS(0.22)T(0.22)LEPGQT(0.444)LLPR;LGAQT(0.059)PVGVSTLEPGQT(0.941)LLPR 182.1 4.21E-14 17788200 54041 54807 56442 64396 55672 61808 57460 40754 60067 52343 TRUE FALSE 58178.42051 52085.36408 58323.74811 59134.64081 53486.03755 64160.14675 49915.43298 46080.68773 65291.51908 50635.0522 1.148975225 1.028642449 1.151845324 1.167859778 1.05630458 1.267109324 0.985788121 0.910055105 1.289452983 1 15.62784882 -7.315622219 24.99997681 1.038828663 1.130312633 0.137255854 0.109756684 649.1676716 299523.3156 0.044394318 0.029930651 4.83E-08 7.315622219 0.09148397 LGAS(ph)NSPGQPNSVK ddPTM_A459_MK2206_30min_R1 1 LGASNSPGQPNSVK 14 0 P49756 P49756 RBM25 RNA-binding protein 25 1 LGAS(0.592)NS(0.408)PGQPNSVK 204.67 2.10E-05 569860000 5243.7 4729.6 5188 4014.5 4760.1 3530.3 4824.1 3981.2 3938.5 3957.5 TRUE FALSE 4797.695779 4421.70218 4835.853015 4323.697486 4570.495137 3730.182535 4502.293091 3946.392788 4347.921169 4447.784978 1.0786708 0.994135778 1.08724973 0.972101284 1.027589049 0.838660716 1.012255114 0.887271486 0.977547519 1 12.11887133 -6.235852028 1.79425795 0.943030591 1.044171335 0.32954808 0.059732489 0.380593231 2.415833908 0.019443344 0.02626031 5.81E-07 6.235852028 0.101140744 LGASEAAAFDS(ph)DESEAVGATR ddPTM_A459_MK2206_30min_R1 4 LGASEAAAFDSDESEAVGATR 21 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03 H3BLZ3 WWC1 Protein KIBRA 1 LGASEAAAFDS(1)DESEAVGATR;LGASEAAAFDS(1)DESEAVGATR;LGASEAAAFDS(0.997)DES(0.003)EAVGATR;LGASEAAAFDS(0.957)DES(0.027)EAVGAT(0.016)R 397.5 2.84E-296 34471800 2847.38 2728.24 2839.23 2554.85 2792.55 2825.88 3118.18 2890.33 2701.78 2288.49 TRUE FALSE 2605.195379 2550.63108 2646.510978 2751.62499 2681.31682 2985.878884 2910.171902 2865.06015 2982.639699 2572.005418 1.012904312 0.991689622 1.028967886 1.069836389 1.042500455 1.160914694 1.131479693 1.113940169 1.159655294 1 11.32867797 -6.122776814 1.212123843 1.118732713 1.003758995 0.440109749 0.046568012 0.384755686 1.154163507 0.017443199 0.029310346 7.54E-07 6.122776814 -0.114973718 LGASEAAAFDS(ph)DESEAVGATR ddPTM_A459_MK2206_30min_R2 1 LGASEAAAFDSDESEAVGATR 21 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03 H3BLZ3 WWC1 Protein KIBRA 1 LGASEAAAFDS(0.972)DES(0.028)EAVGATR 108.47 0.00012401 3476500 6303 7676.3 8255.9 8156.6 9291.9 10152 7478.5 7786.6 7361.9 9695.6 TRUE FALSE 6785.562526 7295.106104 8531.147585 7490.179688 8927.053318 10538.34147 6496.563967 8804.335355 8002.224755 9379.233366 0.723466648 0.777793431 0.909578347 0.798591889 0.951789232 1.123582393 0.692654049 0.938705224 0.853185377 1 13.19525429 -4.960795668 1.088049275 0.912425559 0.656582452 0.259361698 0.109031012 1.943007455 2.33608216 0.035494052 0.535077599 1.09E-05 4.960795668 -0.255843107 LGASEAAAFDSDES(ph)EAVGATR ddPTM_A459_MK2206_30min_R1 1 LGASEAAAFDSDESEAVGATR 21 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03 H3BLZ3 WWC1 Protein KIBRA 1 LGASEAAAFDS(0.424)DES(0.57)EAVGAT(0.006)R 111.93 0.00046253 0 1019.6 1229 1061.9 817.46 910.89 1082.4 1156.6 753.93 1243.4 868.25 TRUE FALSE 932.8776659 1148.991877 989.8211866 880.4209108 874.6073225 1143.684553 1079.445324 747.3384695 1372.65588 975.815365 0.955998132 1.177468523 1.014352942 0.902241287 0.896283615 1.172029662 1.106198327 0.765860527 1.406675821 1 9.93046439 -6.763386314 24.9999846 1.076521973 0.996283136 0.081096269 0.165828667 184.3517218 2367171.993 0.056104145 0.051984626 1.72E-07 6.763386314 -0.080238837 LGASNS(ph)PGQPNSVK ddPTM_A459_MK2206_30min_R1 6 LGASNSPGQPNSVK 14 0 P49756 P49756 RBM25 RNA-binding protein 25 1 LGAS(0.011)NS(0.988)PGQPNS(0.001)VK;LGASNS(0.993)PGQPNS(0.007)VK;LGASNS(0.967)PGQPNS(0.033)VK;LGASNS(0.981)PGQPNS(0.019)VK;LGAS(0.002)NS(0.994)PGQPNS(0.004)VK;LGAS(0.001)NS(0.981)PGQPNS(0.018)VK 191.89 0.00010855 1165540000 51656.6 49261.51 52148.45 43617.19 45547.38 42127.22 49940.14 44791.7 46937.73 43611.03 TRUE FALSE 47262.93491 46054.57675 48608.75851 46976.59353 43733.13141 44512.42679 46608.72438 44400.09089 51817.075 49013.89364 0.964276278 0.939622897 0.99173428 0.958434232 0.892259891 0.90815937 0.950928827 0.905867451 1.057191567 1 15.58090314 -8.263268214 24.99995196 1.028595788 0.939166305 0.567451213 0.031320309 126.4239399 1728126.288 0.026871091 0.008287214 5.45E-09 8.263268214 -0.089429483 LGASNS(ph)PGQPNSVK ddPTM_A459_MK2206_30min_R2 7 LGASNSPGQPNSVK 14 0 P49756 P49756 RBM25 RNA-binding protein 25 1 LGASNS(0.993)PGQPNS(0.007)VK;LGAS(0.004)NS(0.867)PGQPNS(0.129)VK;LGAS(0.001)NS(0.999)PGQPNSVK;LGAS(0.013)NS(0.971)PGQPNS(0.015)VK;LGASNS(1)PGQPNSVK;LGAS(0.157)NS(0.843)PGQPNSVK;LGAS(0.021)NS(0.676)PGQPNS(0.303)VK 183.76 7.36E-05 3249552000 1414119.6 1550576 1480965.8 1643542.2 1420403 1238726 1585654 1210671.2 1111191.6 1406885.7 TRUE FALSE 1522385.684 1473576.651 1530340.461 1509259.545 1364630.841 1285866.586 1377455.725 1368910.083 1207841.037 1360979.135 1.118595903 1.082732727 1.124440795 1.108951274 1.002683147 0.944809919 1.012106424 1.005827384 0.887479467 1 20.37621352 -6.334413543 3.705650791 0.973170851 1.108725074 0.774452459 0.035503829 0.112745521 3.016268772 0.011235041 0.013118604 4.63E-07 6.334413543 0.135554222 LGASNSPGQPNS(ph)VK ddPTM_A459_MK2206_30min_R2 2 LGASNSPGQPNSVK 14 0 P49756 P49756 RBM25 RNA-binding protein 25 1 LGASNS(0.485)PGQPNS(0.515)VK;LGASNS(0.374)PGQPNS(0.626)VK 166.79 0.0002264 43847000 197120 220450 210053 214734 203077 183708 229106 193054 174084 221158 TRUE FALSE 212211.6588 209502.7736 217056.0622 197189.5453 195103.1766 190699.1367 199024.107 218286.8207 189225.5116 213941.6326 0.991913805 0.979252009 1.01455738 0.921697862 0.911945816 0.891360575 0.930272919 1.020310157 0.884472598 1 17.70685773 -5.766104609 24.99979413 0.934752881 0.993642162 0.28863605 0.041649025 145.5151754 779784.5542 0.011665277 0.017967399 1.71E-06 5.766104609 0.058889281 LGDAS(ph)DTEAADGER ddPTM_A459_MK2206_30min_R2 1 LGDASDTEAADGER 14 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 LGDAS(0.985)DT(0.015)EAADGER 225.31 1.01E-09 20726000 36456 47522 36510 45949 46802 40636 40427 36784 40547 36816 TRUE FALSE 39247.09939 45162.12658 37727.22518 42194.81972 44964.31832 42182.43145 35118.88634 41591.7951 44073.70477 35614.69694 1.101991671 1.268075555 1.059316193 1.184758635 1.262521436 1.184410793 0.986078483 1.167826731 1.237514525 1 15.12018509 -11.00629052 6.077833789 0.999883371 1.160896173 0.242531308 0.085560114 0.00013643 1.16E-05 0.08358635 0.020258037 9.86E-12 11.00629052 0.161012803 LGDASDT(ph)EAADGER ddPTM_A459_MK2206_30min_R1 1 LGDASDTEAADGER 14 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 LGDAS(0.179)DT(0.821)EAADGER 164.92 0.0006009 5283800 1038 1144 1053 1327.5 1013.4 809.55 1042.3 1204 735.57 711.8 TRUE FALSE 949.7126492 1069.525392 981.5252938 1429.74428 973.0341321 855.3860214 972.7700688 1193.473555 812.0351338 799.9831578 1.187165805 1.336934886 1.226932448 1.787217976 1.216318272 1.069255037 1.215988186 1.491873352 1.015065287 1 9.643825817 -6.492200337 24.99261611 1.187221005 1.386384795 0.217185952 0.20011788 1190.816059 970116.7462 0.062455569 0.070728134 3.22E-07 6.492200337 0.19916379 LGDDEDREPSLRPDDDRVPR ddPTM_A459_MK2206_30min_R1 1 LGDDEDREPSLRPDDDRVPR 20 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 53.519 0.023708 14903000 4069.6 3740.1 3669.4 3067.5 3250.9 3663.8 4167.1 3842.9 3607.3 3924.1 FALSE TRUE 3723.45915 3496.61881 3420.331352 3303.759382 3121.409769 3871.24119 3889.120362 3809.30193 3982.291744 4410.247133 0.84427449 0.792839654 0.77554188 0.749109808 0.707763006 0.877783279 0.881837286 0.863738882 0.902963399 1 12.10664379 -6.889868939 6.703333974 0.897777232 0.773997238 0.660053982 0.047168982 0.148283026 8.224246796 0.016922754 0.014925808 1.29E-07 6.889868939 -0.123779994 LGDDNLCNTPHLPPCS(ph)PPK ddPTM_A459_MK2206_30min_R2 3 LGDDNLCNTPHLPPCSPPK 19 0 J3KTI7;J3QR52;J3QLN7;Q99741 J3KTI7 CDC6 Cell division control protein 6 homolog 1 LGDDNLCNTPHLPPCS(1)PPK;LGDDNLCNTPHLPPCS(1)PPK;LGDDNLCNTPHLPPCS(1)PPK 124.99 0.00026338 30097900 116784 105826 104603 93282 101034 70158 133718 94550 80074 130628 TRUE FALSE 125725.0728 100570.8347 108090.4118 85660.56221 97066.8975 72827.91185 116160.666 106908.0096 87038.69178 126365.6191 0.994931009 0.795871816 0.855378327 0.677878705 0.768143252 0.57632695 0.919242646 0.846021334 0.688784595 1 16.94724447 -4.110738289 1.467565086 0.776903545 1.876269643 0.202458877 0.117883851 11.06263814 5.275212783 0.032235045 28.84109487 7.75E-05 4.110738289 1.099366098 LGDLYEEEMR ddPTM_A459_MK2206_30min_R1 4 LGDLYEEEMR 10 0 P08670;B0YJC4 P08670 VIM Vimentin 0 ;;; 209.21 0.0031685 134962000 12847.4 12701.3 12618.6 11189.7 13069.8 12039.6 13390.3 12137.9 10316.1 10047.3 FALSE TRUE 11754.66117 11874.44306 11762.08459 12051.53263 12549.20219 12721.27175 12497.05752 12031.77962 11388.49551 11292.03538 1.040969212 1.051576856 1.041626615 1.067259553 1.111332171 1.126570306 1.106714343 1.065510266 1.008542316 1 13.46301793 -5.900522964 4.819791819 1.078649663 1.045693551 0.048709913 0.039389867 0.482105575 18.75690254 0.011720712 0.017757402 1.26E-06 5.900522964 -0.032956112 LGDLYEEEMR ddPTM_A459_MK2206_30min_R2 3 LGDLYEEEMR 10 0 P08670;B0YJC4 P08670 VIM Vimentin 0 ;; 182.39 0.0020675 89555000 229397 270425 251632 300201 284253 279922 289011 211859 237846 256102 FALSE TRUE 246959.8107 256996.0877 260021.2853 275673.618 273091.799 290574.6279 251063.5085 239549.6987 258533.4152 247745.4127 0.996828995 1.03733944 1.049550353 1.112729455 1.102308196 1.172875916 1.013393168 0.966918806 1.043544711 1 17.91849882 -7.493461803 24.87372287 1.001170226 1.079295573 0.357878553 0.047770957 743.0799517 628318.8084 0.021578536 0.014521326 3.21E-08 7.493461803 0.078125347 LGDS(ph)SGPALK ddPTM_A459_MK2206_30min_R2 1 LGDSSGPALK 10 0 Q9UHD8 Q9UHD8 Sep-09 Septin-9 1 LGDS(0.705)S(0.295)GPALK 109.24 0.0073005 0 27456 34112 23546 23771 24833 21924 30677 21765 22810 20302 TRUE FALSE 29558.05247 32418.04768 24331.01189 21828.83326 23857.93164 22758.33318 26649.07305 24609.76023 24793.97257 19639.5474 1.505027171 1.650651465 1.238878442 1.111473336 1.214790298 1.158801306 1.356908716 1.253071658 1.262451321 1 14.26147406 -5.29459 7.92759889 1.209666041 1.577767458 0.708305736 0.096941008 0.123904848 27.04440401 0.024757084 0.052826031 5.07E-06 5.29459 0.368101417 LGDSHDLQR ddPTM_A459_MK2206_30min_R1 2 LGDSHDLQR 9 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 ; 164.68 0.0013751 29503000 21937.8 21711.5 21982.4 18790.1 23497.9 20353.3 22974 21004.9 19252.4 18261.2 FALSE TRUE 20071.87491 20298.0774 20490.29593 20237.31676 22561.92889 21505.68626 21441.44638 20821.25637 21253.75588 20523.53532 0.97799305 0.989014665 0.998380426 0.98605413 1.099319807 1.047854861 1.044724802 1.014506324 1.035579667 1 14.32499165 -6.140394564 19.67031887 1.041765326 0.988682662 0.519388329 0.024697858 3.110247893 493.2384583 0.007380474 0.009528195 7.24E-07 6.140394564 -0.053082664 LGDSHDLQR ddPTM_A459_MK2206_30min_R2 4 LGDSHDLQR 9 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 ;;; 173.39 2.54E-06 38386000 254330 339221 296423 315097 306351 317765 326163 252934 281370 316132 FALSE TRUE 273801.7003 322375.7784 306305.5949 289352.5672 294322.1204 329857.7697 283337.4063 285993.3423 305843.054 305816.6387 0.895313288 1.054147282 1.001598854 0.946163585 0.962413692 1.078612894 0.92649441 0.935179143 1.000086376 1 18.22230738 LGDSS(ph)GPALK ddPTM_A459_MK2206_30min_R2 1 LGDSSGPALK 10 0 Q9UHD8 Q9UHD8 Sep-09 Septin-9 1 LGDS(0.38)S(0.62)GPALK 88.441 0.037449 0 30647 35488 29106 27389 22523 21195 31366 19351 17700 24806 TRUE FALSE 32993.35788 33725.71752 30076.37951 25151.23109 21638.63385 22001.59058 27247.60652 21880.24214 19239.51401 23996.58225 1.374919042 1.405438373 1.253360966 1.04811722 0.901738157 0.916863508 1.135478638 0.911806603 0.801760593 1 14.55054132 -5.710090454 2.099553623 0.948164818 1.390875633 0.834286492 0.081138315 0.124876074 1.119026145 0.025629849 0.052231456 1.95E-06 5.710090454 0.442710815 LGDSS(ph)LSR ddPTM_A459_MK2206_30min_R1 2 LGDSSLSR 8 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 LGDS(0.037)S(0.963)LSR;LGDS(0.043)S(0.957)LSR 126.31 0.0048677 87343000 12213.1 11985.3 11811.3 9404 11238.4 11497.8 14947.9 11414.6 13273.2 14531 TRUE FALSE 11174.31171 11205.05479 11009.58186 10128.29771 10790.75073 12148.7955 13950.75286 11314.80336 14652.99664 16331.20998 0.684230484 0.686112958 0.674143672 0.620180484 0.660744105 0.743900514 0.854238778 0.692833132 0.897238885 1 13.99534406 -8.32006488 0.502114967 1.007406278 0.656964766 0.786085456 0.054197052 0.433270314 0.278898106 0.062213296 0.032882354 4.79E-09 8.32006488 -0.350441511 LGDSS(ph)LSR ddPTM_A459_MK2206_30min_R2 4 LGDSSLSR 8 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 LGDS(0.128)S(0.871)LSR;LGDS(0.107)S(0.893)LSR;LGDS(0.046)S(0.954)LSR;LGDS(0.043)S(0.957)LSR 131.5 0.0035513 142523000 618720 602210 610955 625412 516369 538647 663710 444166 442330 587250 TRUE FALSE 666089.6789 572305.1271 631323.9348 574313.839 496093.7585 559145.589 576564.0797 502220.0212 480803.0639 568088.0806 1.172511274 1.007423227 1.111313468 1.010959143 0.873269085 0.984258618 1.01492022 0.884053087 0.846353022 1 19.11575511 -5.318680808 0.61182344 0.922704541 1.195135947 0.531072404 0.066746805 1.746799677 0.771032263 0.037952852 0.306994397 4.80E-06 5.318680808 0.272431406 LGDVISIQPCPDVK ddPTM_A459_MK2206_30min_R2 1 LGDVISIQPCPDVK 14 0 P55072;C9JUP7;C9IZA5 P55072 VCP Transitional endoplasmic reticulum ATPase 0 150.69 0.0016788 0 13391 14988 9733.3 15673 17022 14518 13119 14246 12576 11588 FALSE TRUE 14416.22526 14243.71771 10057.80336 14392.46576 16353.63075 15070.49266 11396.45954 16108.00111 13669.83775 11209.88451 1.286027991 1.270639113 0.897226315 1.283908479 1.458858094 1.344393214 1.016643796 1.436946215 1.219445012 1 13.45248379 -3.32676604 2.353427039 1.226854803 45.02603112 0.01037949 0.179206461 7315.388084 74.77565803 0.047521181 1724851.331 0.000471231 3.32676604 43.79917631 LGDVS(ph)PTQIDVSQFGSFK ddPTM_A459_MK2206_30min_R1 3 LGDVSPTQIDVSQFGSFK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 LGDVS(0.999)PT(0.001)QIDVSQFGSFK;LGDVS(0.998)PT(0.002)QIDVSQFGSFK;LGDVS(0.729)PT(0.27)QIDVSQFGSFK 214.24 3.54E-12 1512590000 22943.15 26483.98 24891.91 17409.04 19634.15 21560.05 26488.08 19099.1 27757 34856.36 TRUE FALSE 20991.71461 24759.86809 23202.3165 18749.88728 18852.08023 22780.7614 24721.10851 18932.11858 30642.43948 39174.62903 0.535849736 0.632038355 0.592279163 0.478623225 0.481231876 0.581518242 0.63104895 0.483274993 0.78220114 1 15.25763199 -8.511676473 3.44985056 0.998979946 0.555546882 0.866675959 0.056359264 0.071286527 2.161211304 0.057077707 0.015084607 3.08E-09 8.511676473 -0.443433064 LGDVS(ph)PTQIDVSQFGSFK ddPTM_A459_MK2206_30min_R2 6 LGDVSPTQIDVSQFGSFK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 LGDVS(0.981)PT(0.019)QIDVSQFGSFK;LGDVS(0.975)PT(0.025)QIDVSQFGSFK;LGDVS(0.995)PT(0.005)QIDVSQFGSFK;LGDVS(0.924)PT(0.076)QIDVSQFGSFK;LGDVS(0.858)PT(0.142)QIDVSQFGSFK;LGDVS(0.614)PT(0.386)QIDVSQFGSFK 201.22 1.41E-10 897725600 1065344.4 876121.9 908083.2 989539 768719.6 752932 1009209.1 859462.8 637988.5 1107457.1 TRUE FALSE 1146907.986 832614.9604 938358.2407 908690.4983 738535.806 781585.3549 876698.7329 971797.5389 693479.5865 1071320.866 1.070555072 0.777185423 0.875889074 0.848196397 0.689369385 0.729553003 0.818334414 0.907102223 0.647312686 1 20.03095921 -4.757843384 24.98942776 0.80460225 1.07055545 0.376925757 0.100129947 105.7547653 734803.9613 0.023849065 0.171565111 1.75E-05 4.757843384 0.2659532 LGDVS(ph)PTQIDVSQFGSFKEDTK ddPTM_A459_MK2206_30min_R1 1 LGDVSPTQIDVSQFGSFKEDTK 22 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 LGDVS(0.902)PT(0.098)QIDVSQFGSFKEDTK 116.99 1.83E-05 96368000 3977.8 3788.4 4500.4 4263.3 4290.5 2932.4 2507.8 4463.1 2666.9 1155.2 TRUE FALSE 3639.467222 3541.774471 4194.925387 4591.660105 4119.6003 3098.429954 2340.509238 4424.079587 2944.133799 1298.314897 2.803223801 2.727977996 3.23105388 3.536630531 3.173036301 2.386501118 1.802728477 3.407555129 2.267657719 1 10.34242463 -6.795089048 6.208692884 2.294074706 3.106959596 0.362950052 0.600159908 0.235240524 25.66334292 0.209673585 0.188652364 1.60E-07 6.795089048 0.81288489 LGDVSPT(ph)QIDVSQFGSFK ddPTM_A459_MK2206_30min_R2 1 LGDVSPTQIDVSQFGSFK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 LGDVS(0.122)PT(0.878)QIDVSQFGSFK 105.03 0.0041173 2650000 8866.3 8955.6 7929.8 7994.2 7035.2 7357.8 7486.9 6064.3 5165.5 10185 TRUE FALSE 9545.110745 8510.877927 8194.175574 7341.048288 6758.962699 7637.806235 6503.861037 6856.924832 5614.785853 9852.664284 0.968784734 0.863814871 0.831671042 0.745082556 0.686003552 0.775202119 0.66011191 0.695946257 0.569874878 1 13.26629818 -5.166620066 0.968824858 0.711149877 1.011513904 0.332334397 0.106350189 1.234033725 1.387747815 0.035491396 0.340897569 6.81E-06 5.166620066 0.300364027 LGDVSPT(ph)QIDVSQFGSFKEDTK ddPTM_A459_MK2206_30min_R1 1 LGDVSPTQIDVSQFGSFKEDTK 22 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 LGDVS(0.274)PT(0.726)QIDVS(0.001)QFGSFKEDTK 90.968 0.00053002 95074000 4497.8 4391.7 4756.3 4413.9 4752.6 3162 3201.4 4590.5 2665.5 1523.1 TRUE FALSE 4115.238491 4105.799532 4433.455608 4753.859343 4563.293878 3341.029707 2987.840447 4550.365742 2942.588264 1711.793127 2.4040513 2.398537222 2.589948247 2.777122579 2.665797523 1.951771891 1.745444821 2.65824513 1.719009276 1 10.74129264 -6.769419857 22.2844983 1.91419325 2.570665441 0.465611866 0.395826022 47.82740142 133549.4072 0.134088531 0.120721604 1.70E-07 6.769419857 0.656472191 LGDVSPT(ph)QIDVSQFGSFKEDTK ddPTM_A459_MK2206_30min_R2 2 LGDVSPTQIDVSQFGSFKEDTK 22 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 LGDVS(0.008)PT(0.985)QIDVS(0.007)QFGSFKEDTK;LGDVS(0.044)PT(0.954)QIDVS(0.002)QFGSFKEDTK 82.609 0.0012355 15983000 41014 96559 66665 86506 115430 82954 96030 56192 97484 77093 TRUE FALSE 44154.06337 91764.02047 68887.57783 79438.18308 110897.6382 86110.8726 83421.14565 63536.48734 105962.9821 74577.46172 0.592056398 1.23045245 0.923705048 1.065176814 1.487012774 1.154650086 1.118583869 0.851952934 1.420844578 1 16.18645207 -4.755359429 24.99956452 1.136194297 0.592055508 0.425793696 0.190570724 200.0407366 822448.3326 0.046965161 0.420432331 1.76E-05 4.755359429 -0.54413879 LGDVYVNDAFGT(ph)AHR ddPTM_A459_MK2206_30min_R1 1 LGDVYVNDAFGTAHR 15 0 P00558-2;P00558;P07205 P00558-2 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 1 LGDVYVNDAFGT(1)AHR 184.83 5.60E-14 0 1761.5 2313.8 2190.7 1718.3 2273.8 2233.7 2400.3 1654.2 1477.2 1179.5 TRUE FALSE 1611.675175 2163.171199 2042.001388 1850.643764 2183.229731 2360.170164 2240.180367 1639.737504 1630.760226 1325.625365 1.215784805 1.631811866 1.540406092 1.396053374 1.646943238 1.78042019 1.689904573 1.236953929 1.230181822 1 10.3724574 -7.882496693 5.059172318 1.152213301 1.56454702 0.574222929 0.159698869 0.161188433 6.375811946 0.094721394 0.044045739 1.31E-08 7.882496693 0.412333719 LGDVYVNDAFGTAHR ddPTM_A459_MK2206_30min_R1 1 LGDVYVNDAFGTAHR 15 0 P00558-2;P00558;P07205 P00558-2 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 0 188.19 3.46E-05 51281000 5942.4 5492.1 6305.1 5526 6561.8 5655.9 6674.6 5687.6 5254.2 4779 FALSE TRUE 5436.967675 5134.563292 5877.127379 5951.613477 6300.429611 5976.13217 6229.349612 5637.873913 5800.392892 5371.0586 1.012271152 0.955968585 1.094221422 1.10808947 1.173033117 1.112654435 1.159799227 1.049676485 1.079934762 1 12.39099075 -5.310267253 6.715219918 1.105207296 0.98426975 0.452730322 0.049113467 0.16656966 18.7262751 0.012745384 0.027202903 4.89E-06 5.310267253 -0.120937546 LGDVYVNDAFGTAHR ddPTM_A459_MK2206_30min_R2 4 LGDVYVNDAFGTAHR 15 0 P00558-2;P00558;P07205 P00558-2 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 0 ;;; 190.18 3.81E-05 61328000 270681 362979 322099 390735 327696 364135 368200 280374 332590 332077 FALSE TRUE 291404.5455 344953.9907 332837.6199 358810.7006 314829.0085 377992.4126 319854.8977 317019.8445 361518.077 321241.3547 0.907120273 1.073815639 1.036098295 1.116950528 0.980038852 1.176661744 0.995684064 0.986858759 1.125378385 1 18.2932981 -4.757049835 24.99166997 1.055210974 0.907120053 0.322553907 0.06411828 152.4650334 867942.2648 0.01499113 0.11487018 1.75E-05 4.757049835 -0.148090922 LGEAS(ph)DSELADADK ddPTM_A459_MK2206_30min_R1 3 LGEASDSELADADK 14 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LGEAS(0.997)DS(0.003)ELADADK;LGEAS(0.957)DS(0.043)ELADADK;LGEAS(0.947)DS(0.053)ELADADK 272.09 1.76E-44 83591000 9269.4 10316.8 11169 8321 6835.7 6470.1 8029.7 7378 11042.3 11444.4 TRUE FALSE 8480.988854 9645.174445 10410.8794 8961.884862 6563.419594 6836.431471 7494.053364 7313.494924 12190.1866 12862.21867 0.659372156 0.749884191 0.809415519 0.696760418 0.510286737 0.531512614 0.582640799 0.568602907 0.947751466 1 13.6508519 -8.314136245 6.199631027 0.983474107 0.640290039 0.685584844 0.090866112 0.159105072 13.8437547 0.100124367 0.026546278 4.85E-09 8.314136245 -0.343184068 LGEAS(ph)DSELADADK ddPTM_A459_MK2206_30min_R2 4 LGEASDSELADADK 14 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LGEAS(0.948)DS(0.052)ELADADK;LGEAS(0.828)DS(0.172)ELADADK;LGEAS(0.954)DS(0.046)ELADADK;LGEAS(0.608)DS(0.392)ELADADK 202.92 4.14E-05 117041000 108105 82856 97657.5 82814 89466 57983.4 103813 77297.8 63530 92552 TRUE FALSE 116381.6019 78741.49152 100913.3523 76047.83129 85953.11531 60189.99892 90182.2284 87400.88786 69055.72456 89532.03582 1.299887809 0.879478399 1.127120046 0.849392406 0.96002637 0.672273319 1.007262122 0.976196811 0.771296262 1 16.45011637 -2.075602159 1.114223381 0.902643775 199.993507 0.4377889 0.126434673 771.5149308 2.42909338 0.036842779 390763.3801 0.008402293 2.075602159 199.0908632 LGEAS(ph)DSELADADKASVASEVSTTSSTSKPPTGR ddPTM_A459_MK2206_30min_R1 1 LGEASDSELADADKASVASEVSTTSSTSKPPTGR 34 2 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LGEAS(0.652)DS(0.301)ELADADKAS(0.04)VAS(0.006)EVS(0.001)TTSSTSKPPTGR 46.939 0.0063015 12716000 609.91 566.19 900.51 831.25 714.01 585.14 588.54 721.48 438.29 267.95 TRUE FALSE 558.0339517 529.3309281 839.3858902 895.273019 685.5694698 618.2701211 549.2795705 715.1721764 483.8518139 301.1456689 1.853036618 1.757723862 2.787308525 2.972890237 2.276537704 2.05305998 1.823966363 2.374837994 1.606703545 1 8.2343177 -8.726069083 0.736334771 0.984485653 2.306847144 0.50337558 0.387690943 0.892646235 1.009210886 0.429816587 0.158174677 1.88E-09 8.726069083 1.322361492 LGEASDS(ph)ELADADK ddPTM_A459_MK2206_30min_R1 1 LGEASDSELADADK 14 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LGEAS(0.134)DS(0.866)ELADADK 252.12 1.25E-27 31488000 3687.5 4207.5 3753.9 3223 2365.2 2348.5 3282.2 2306.6 4275.7 3867.3 TRUE FALSE 3373.858761 3933.590985 3499.095727 3471.236018 2270.989076 2481.47004 3063.250427 2286.433639 4720.174316 4346.410321 0.776240279 0.905020625 0.805054164 0.798644344 0.522497626 0.570924017 0.704777092 0.526051033 1.085993721 1 12.08560866 -10.53277088 8.30704372 1.000000002 0.732899341 0.171536844 0.167269396 5.12E-09 5.90E-10 0.164566507 0.039913241 2.93E-11 10.53277088 -0.26710066 LGELLGNPEGQSLGS(ph)SPSQDR ddPTM_A459_MK2206_30min_R1 1 LGELLGNPEGQSLGSSPSQDR 21 0 O75123-2;O75123 O75123-2 ZNF623 Zinc finger protein 623 1 LGELLGNPEGQS(0.006)LGS(0.672)S(0.189)PS(0.133)QDR 110.33 0.00048548 0 379.35 516.18 514.57 473.52 557.79 393.94 436.34 414.23 357.89 263.35 TRUE FALSE 347.0842905 482.5765882 479.6424221 509.9905924 535.5720432 416.2445424 407.2325547 410.6084308 395.0939462 295.9757862 1.172677991 1.630459689 1.620546154 1.723082145 1.809513035 1.406346606 1.375898211 1.387304131 1.334886044 1 8.209335343 -8.401585163 0.687829389 1.011939284 1.585028947 0.494574474 0.169629684 0.620639494 0.678985769 0.175170612 0.072137777 3.97E-09 8.401585163 0.573089663 LGELLGNPEGQSLGSS(ph)PSQDR ddPTM_A459_MK2206_30min_R1 1 LGELLGNPEGQSLGSSPSQDR 21 0 O75123-2;O75123 O75123-2 ZNF623 Zinc finger protein 623 1 LGELLGNPEGQS(0.013)LGS(0.236)S(0.733)PS(0.019)QDR 67.579 0.0084061 2978800 276.9 281.72 241.54 259.92 241.8 268.66 296.17 221.51 248.27 150.22 TRUE FALSE 253.3482009 263.3799768 225.1449378 279.9390834 232.168594 283.871297 276.4130397 219.5733614 274.0785549 168.8303877 1.500607825 1.56002708 1.333556955 1.658108397 1.375158804 1.681399308 1.637223272 1.300555927 1.623395875 1 7.399430787 -10.92141978 3.16838919 0.993633297 1.516356767 0.579941815 0.132467512 75679738.29 101508813.9 4444140.945 0.032466455 1.20E-11 10.92141978 0.52272347 LGELLGNPEGQSLGSS(ph)PSQDR ddPTM_A459_MK2206_30min_R2 1 LGELLGNPEGQSLGSSPSQDR 21 0 O75123-2;O75123 O75123-2 ZNF623 Zinc finger protein 623 1 LGELLGNPEGQSLGS(0.009)S(0.914)PS(0.076)QDR 102.67 0.00093339 0 8011.2 8540.1 8438.4 8724.1 8814.8 7428.2 8416.9 6920.8 8040 7949.7 TRUE FALSE 8624.543632 8116.011052 8719.732044 8011.313123 8468.686661 7710.885356 7311.750919 7825.372323 8739.304667 7690.30194 1.121483096 1.055356619 1.133860817 1.041742338 1.101216406 1.002676542 0.950775532 1.017563729 1.136405922 1 12.90882453 -6.760098509 24.99904707 1.018162773 1.088440984 0.316729147 0.050681208 45.6887156 851825.0357 0.017496964 0.016591993 1.74E-07 6.760098509 0.070278211 LGELTMQLHPVADS(ph)SPAGAK ddPTM_A459_MK2206_30min_R1 1 LGELTMQLHPVADSSPAGAK 20 0 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038 H0YIS7 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 LGELT(0.001)MQLHPVADS(0.778)S(0.221)PAGAK 64.257 0.012075 9512700 2784.1 2917.6 2679.4 2737.7 2231.1 2138.9 2680.4 2393 2573.7 2500 TRUE FALSE 2547.297675 2727.66371 2497.529793 2948.558128 2142.230563 2260.00267 2501.595407 2372.078253 2841.245325 2809.718874 0.906602329 0.970795952 0.888889567 1.049413931 0.762435909 0.804351884 0.890336549 0.844240424 1.0112205 1 11.45621007 -3.945151484 14.97192715 0.905425704 0.911121505 0 0.089471148 2862661.937 0.084144138 0.02110723 11293634.97 0.000113461 3.945151484 0.005695801 LGELTMQLHPVADS(ph)SPAGAQIK ddPTM_A459_MK2206_30min_R1 1 LGELTMQLHPVADSSPAGAQIK 22 0 Q8IXM2-2 Q8IXM2-2 BAP18 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.5)S(0.5)PAGAQIK 79.558 0.0024129 9249700 1664 1713 1480.3 1555.6 1308.4 1421.1 1675.5 1260.3 1635.4 1286 TRUE FALSE 1522.468062 1601.483389 1379.82136 1675.412582 1256.283657 1501.561454 1563.730452 1249.28133 1805.405682 1445.319389 1.053378287 1.10804809 0.954682661 1.159198856 0.869208334 1.038913243 1.081927264 0.864363503 1.249139599 1 10.49717262 -5.228774601 24.90134585 1.023782532 1.080713186 0.033689466 0.113523367 2325.360784 1772685.296 0.02671937 0.070682106 5.91E-06 5.228774601 0.056930654 LGELTMQLHPVADS(ph)SPAGAQIK ddPTM_A459_MK2206_30min_R2 2 LGELTMQLHPVADSSPAGAQIK 22 0 Q8IXM2-2 Q8IXM2-2 BAP18 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.715)S(0.285)PAGAQIK;LGELTMQLHPVADS(0.5)S(0.5)PAGAQIK 76.606 0.0031321 9091600 30209 38244 33153 41450 36405 38331 41990 29152 33743 36934 TRUE FALSE 32521.82427 36344.85857 34258.30447 38063.40241 34975.55678 39789.71306 36476.66256 32962.26649 36677.90515 35728.8466 0.91023997 1.017241306 0.958841601 1.065340923 0.978916481 1.113657922 1.020930313 0.922567327 1.026562809 1 15.12480172 -4.759508775 24.88302212 1.011638462 0.910239835 0.265508565 0.050556651 68.03722529 876664.0172 0.012628488 0.079953049 1.74E-05 4.759508775 -0.101398627 LGELTMQLHPVADSS(ph)PAGAQIK ddPTM_A459_MK2206_30min_R1 2 LGELTMQLHPVADSSPAGAQIK 22 0 Q8IXM2-2 Q8IXM2-2 BAP18 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.247)S(0.753)PAGAQIK;LGELTMQLHPVADS(0.256)S(0.744)PAGAQIK 167.04 7.13E-12 49087000 7808.7 8560 8168.2 7811.4 8461 8581.8 8306.3 7856.9 7044.3 7548.7 TRUE FALSE 7144.52906 8002.742444 7613.765342 8413.035381 8123.980454 9067.6941 7752.201883 7788.207952 7776.580193 8483.889946 0.842128918 0.943286923 0.897438014 0.99164834 0.957577303 1.068813263 0.913755592 0.917999644 0.916629075 1 13.05051019 -3.630985719 0.968132114 0.961563744 2.51E-11 0.343581833 0.048643239 19.00705056 2.520616635 0.016333918 31.82753471 0.000233891 3.630985719 -0.961563744 LGELTMQLHPVADSS(ph)PAGAQIK ddPTM_A459_MK2206_30min_R2 2 LGELTMQLHPVADSSPAGAQIK 22 0 Q8IXM2-2 Q8IXM2-2 BAP18 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.218)S(0.782)PAGAQIK;LGELTMQLHPVADS(0.243)S(0.757)PAGAQIK 182.62 1.05E-16 24801000 51905 63424 55975 73184 69246 56972 76212 53490 52841 65220 TRUE FALSE 55878.88671 60274.45639 57841.17856 67204.6331 66527.05411 59140.10938 66205.27285 60481.32666 57437.01467 63091.87674 0.885674822 0.955344166 0.916776954 1.065186781 1.054447221 0.937364879 1.04934702 0.95862304 0.910370996 1 15.94516665 -5.719026463 24.99996654 0.996908482 0.922873046 0.326795837 0.050702267 183.5433315 108186.8655 0.014184851 0.02456865 1.91E-06 5.719026463 -0.074035436 LGELWEEMALS(ph)PR ddPTM_A459_MK2206_30min_R1 2 LGELWEEMALSPR 13 0 Q9NWQ4-4;Q9NWQ4;G3V5D0;G3V290;G3V553;Q9NWQ4-1 Q9NWQ4-4 GPATCH2L G patch domain-containing protein 2-like 1 LGELWEEMALS(1)PR;LGELWEEMALS(1)PR 172.85 0.00016481 11012100 1549.47 1502.93 1610.76 1183.47 1524.04 1289.77 1650.89 1363.36 1309.8 1524.37 TRUE FALSE 1417.67944 1405.088984 1501.426099 1274.621064 1463.33426 1362.795663 1540.76214 1351.440287 1445.958397 1713.220464 0.827493875 0.820144875 0.876376468 0.743991267 0.854142412 0.795458431 0.899336759 0.788830344 0.84400019 1 10.7424951 -14.52287341 0.404232532 3.868578684 0.82414526 0.599589252 0.042345689 511.1032285 3.525535053 1295.592037 0.024531618 3.00E-15 14.52287341 -3.044433424 LGELWEEMALS(ph)PR ddPTM_A459_MK2206_30min_R2 1 LGELWEEMALSPR 13 0 Q9NWQ4-4;Q9NWQ4;G3V5D0;G3V290;G3V553;Q9NWQ4-1 Q9NWQ4-4 GPATCH2L G patch domain-containing protein 2-like 1 LGELWEEMALS(1)PR 96.673 0.013992 624050 1997.7 1104.2 2749.2 3138.7 2272.7 1145 870.07 661.29 2114.2 3394 TRUE FALSE 2150.645448 1049.367034 2840.856956 2882.25817 2183.462379 1188.573777 755.8287639 747.7228735 2298.089294 3283.254058 0.655034734 0.31961189 0.865256513 0.877866324 0.665029979 0.362010906 0.230207212 0.227738354 0.699942573 1 11.68091067 -8.53309043 23.37143953 1.000000018 0.526747853 0.29084758 0.228218835 871.935009 1995595.978 0.246616904 0.063676211 2.93E-09 8.53309043 -0.473252165 LGEYEDVSR ddPTM_A459_MK2206_30min_R2 1 LGEYEDVSR 9 0 K7EK42;A0A494C0X0;Q99426;K7EP07;Q99426-2;K7EL99 K7EK42 TBCB Tubulin-folding cofactor B 0 167.23 0.011827 14527000 44973 62020 45093 58387 48690 65545 64527 48740 40714 47678 FALSE TRUE 48416.16746 58940.17699 46596.37811 53616.59533 46778.18595 68039.3609 56054.52739 55110.48535 44255.23013 46122.27076 1.04973512 1.27791143 1.010279358 1.162488196 1.014221225 1.475195383 1.215346219 1.194877972 0.959519759 1 15.49317592 -8.260760227 24.97866618 0.97975986 1.178520221 0.260933886 0.131331489 79.66040263 2930136.636 0.102212018 0.033410301 5.49E-09 8.260760227 0.198760361 LGFSLT(ph)PSK ddPTM_A459_MK2206_30min_R1 1 LGFSLTPSK 9 0 P38432 P38432 COIL Coilin 1 LGFS(0.001)LT(0.992)PS(0.007)K 129.88 0.0093032 194960000 8619.7 9006.5 9199.7 7436.4 7667.5 6719.4 7720.4 7800.4 6885 5733.3 TRUE FALSE 7886.549251 8420.175213 8575.249996 8009.152817 7362.087239 7099.846621 7205.386203 7732.201925 7600.720388 6443.584488 1.223938208 1.306753287 1.330819827 1.242965438 1.14254531 1.10184737 1.118226387 1.199984564 1.179579534 1 12.65364775 -6.174433568 3.209591716 1.13126582 1.288909738 0.640135729 0.05647123 0.170232 3.386508849 0.017514383 0.023115481 6.69E-07 6.174433568 0.157643919 LGFSLT(ph)PSK ddPTM_A459_MK2206_30min_R2 2 LGFSLTPSK 9 0 P38432 P38432 COIL Coilin 1 LGFS(0.01)LT(0.972)PS(0.018)K;LGFS(0.001)LT(0.996)PS(0.003)K 135.8 0.006304 295670000 496700 540620 454620 514750 491600 420260 562870 423920 424050 515520 TRUE FALSE 534727.7339 513773.5969 469776.8039 472693.2784 472297.3139 436253.2888 488964.4929 479327.7995 460933.1025 498698.6246 1.072246258 1.030228622 0.942005413 0.947853583 0.947059588 0.874783421 0.980480933 0.961157252 0.924271854 1 18.9278087 -5.122294444 2.769744296 0.943903331 1.069536129 0.639817193 0.03180686 0.170887294 2.404261722 0.008339206 0.033429178 7.55E-06 5.122294444 0.125632798 LGFSS(ph)SPTK ddPTM_A459_MK2206_30min_R1 1 LGFSSSPTK 9 0 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 LGFS(0.062)S(0.416)S(0.416)PT(0.106)K 112.11 0.0098852 39088000 6114 6277.7 5531 4375.4 4659.9 4175 5002.6 5251 5408.1 5804.6 TRUE FALSE 5593.972194 5869.020589 5155.57113 4712.394066 4474.286315 4411.384892 4668.885682 5205.091061 5970.291348 6523.71767 0.857482263 0.89964356 0.790281154 0.722347947 0.685849165 0.676207205 0.715678685 0.797871907 0.915167034 1 12.67147863 -8.368681856 2.374254322 0.996301476 0.76188214 0.571313832 0.067955744 0.234255927 2.572035748 0.075741188 0.02110368 4.28E-09 8.368681856 -0.234419336 LGFSSS(ph)PTK ddPTM_A459_MK2206_30min_R2 1 LGFSSSPTK 9 0 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 LGFS(0.034)S(0.351)S(0.573)PT(0.042)K 92.239 0.026157 42099000 562970 495050 504100 526070 480010 416850 607990 478390 459200 589300 TRUE FALSE 606071.4161 470466.5369 520906.4424 483088.3982 461162.3955 432713.5189 528160.1827 540917.2156 499140.386 570071.1893 1.063150406 0.825276818 0.913756829 0.847417669 0.808955801 0.759051724 0.9264811 0.948859065 0.875575534 1 19.12078257 -10.62135385 7.184381751 1.000000038 0.880452172 0.150876525 0.080805439 5.21E-08 6.47E-09 0.078929205 0.019143137 2.39E-11 10.62135385 -0.119547866 LGFSSSPT(ph)K ddPTM_A459_MK2206_30min_R2 1 LGFSSSPTK 9 0 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 LGFS(0.007)S(0.061)S(0.061)PT(0.87)K 118.71 0.016668 40260000 526840 405980 387210 390580 437070 366590 468690 435710 358460 447720 TRUE FALSE 567175.2755 385819.6236 400119.3881 358668.3646 419908.4357 380540.8393 407150.44 492658.793 389638.2029 433110.9331 1.309538116 0.890810169 0.923826571 0.828121244 0.969517054 0.878622104 0.940060407 1.137488702 0.8996268 1 18.72437707 -10.58920617 14.96133059 0.999999979 0.967685016 0.0001555 0.136505965 0 0 0.12918364 0.031331635 2.58E-11 10.58920617 -0.032314963 LGGAVPFAPPEVS(ph)PEQAK ddPTM_A459_MK2206_30min_R1 2 LGGAVPFAPPEVSPEQAK 18 0 A0A096LP25;A0A096LNZ0;Q6ZSR9 A0A096LP25 AAK1 Uncharacterized protein FLJ45252 1 LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK 217.65 3.18E-14 215267000 23654.1 22452.3 23831 19903.2 20175.4 17618.4 20512 20656.3 19690.8 18112.5 TRUE FALSE 21642.19458 20990.65119 22213.41812 21436.14791 19371.7711 18615.93858 19143.68191 20475.70415 21737.72912 20356.41324 1.063163452 1.031156665 1.091224562 1.053041499 0.95162988 0.914499935 0.940425097 1.005860114 1.067856546 1 14.31319576 -6.217275094 7.887444774 0.975108317 1.06014149 0.463232987 0.041780563 0.292405825 47.53196702 0.013596561 0.017490964 6.06E-07 6.217275094 0.085033173 LGGAVPFAPPEVS(ph)PEQAK ddPTM_A459_MK2206_30min_R2 8 LGGAVPFAPPEVSPEQAK 18 0 A0A096LP25;A0A096LNZ0;Q6ZSR9 A0A096LP25 AAK1 Uncharacterized protein FLJ45252 1 LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK 216.72 3.53E-14 64680800 427881.3 465333 437966.5 453851.2 511045 389579.7 566648 397800.6 399972.4 503474 TRUE FALSE 460640.2213 442225.2399 452568.0845 416770.1052 490978.8055 404405.4285 492246.4369 449794.5043 434761.2764 487045.6846 0.945784422 0.907974865 0.929210747 0.855710498 1.008075466 0.830323399 1.010678161 0.923516045 0.892649889 1 18.89369758 -11.94598949 2.246105359 1.688138342 0.922860578 0.153239078 0.054540165 7268733.991 512279.4719 25711522.06 0.013359768 1.13E-12 11.94598949 -0.765277764 LGGKPSS(ph)PSLSPLMGFGSNK ddPTM_A459_MK2206_30min_R2 1 LGGKPSSPSLSPLMGFGSNK 20 1 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62;A0A087WYL6;Q8TEW8-6;Q8TEW8-3 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 LGGKPS(0.185)S(0.601)PS(0.077)LS(0.133)PLMGFGS(0.004)NK 51.628 0.035525 4026700 12177 13860 11427 13491 12900 11502 14287 10409 10859 13886 TRUE FALSE 13109.28048 13171.73255 11807.97048 12388.74214 12393.48118 11939.71667 12411.09974 11769.49204 11803.49619 13432.90096 0.97590837 0.980557558 0.87903354 0.922268554 0.922621348 0.888841264 0.923932945 0.876169048 0.878700456 1 13.71348328 -5.247662637 24.38477616 0.907447665 0.978232985 0.363804542 0.035009601 537.2985046 951010.3544 0.008315089 0.021720012 5.65E-06 5.247662637 0.070785319 LGGLRPES(ph)PESLTSVSR ddPTM_A459_MK2206_30min_R1 6 LGGLRPESPESLTSVSR 17 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LGGLRPES(0.968)PES(0.026)LT(0.006)S(0.001)VSR;LGGLRPES(0.887)PES(0.027)LT(0.01)S(0.041)VS(0.035)R;LGGLRPES(0.986)PES(0.009)LT(0.002)S(0.002)VSR;LGGLRPES(0.675)PES(0.051)LT(0.09)S(0.179)VS(0.005)R;LGGLRPES(0.976)PES(0.024)LTSVSR;LGGLRPES(0.929)PES(0.065)LT(0.005)S(0.001)VSR 270.95 5.61E-51 4508260000 20594.7 21370.9 20690.4 17990.69 21889.2 19330.5 22342.9 19416.2 17479.75 15641.6 TRUE FALSE 18843.01262 19979.65053 19285.99329 19376.33606 21017.30681 20424.9762 20852.44591 19246.44621 19296.83256 17579.3995 1.071880335 1.136537715 1.097079186 1.102218313 1.195564548 1.161869961 1.186186474 1.09482956 1.097695776 1 14.10159817 -8.679460496 1.541384261 1.00088781 1.135022871 0.516352272 0.038401177 0.529568076 2.520013632 0.038998546 0.01132525 2.09E-09 8.679460496 0.134135061 LGGLRPES(ph)PESLTSVSR ddPTM_A459_MK2206_30min_R2 2 LGGLRPESPESLTSVSR 17 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LGGLRPES(0.713)PES(0.281)LT(0.005)S(0.001)VSR;LGGLRPES(0.604)PES(0.17)LT(0.026)S(0.026)VS(0.174)R 109.67 0.0105 1269600000 92285 127593 97812 123479 114995 107756 109288 96801 90536 97924 TRUE FALSE 99350.41056 121256.9172 101073.0033 113390.3707 110479.7185 111856.7301 94938.35432 109453.2231 98410.65763 94728.7479 1.048788385 1.280043491 1.066972862 1.197000628 1.166274451 1.180810816 1.002212701 1.155438296 1.038867924 1 16.53151469 -8.050686991 0.647917447 1.003524775 1.161130993 0.297854455 0.075402155 0.84823363 0.777479235 0.068919593 0.032667884 8.90E-09 8.050686991 0.157606218 LGGLRPESPES(ph)LTSVSR ddPTM_A459_MK2206_30min_R2 2 LGGLRPESPESLTSVSR 17 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LGGLRPES(0.116)PES(0.847)LT(0.036)S(0.002)VSR;LGGLRPES(0.01)PES(0.943)LT(0.047)SVSR 154.15 0.00045575 499912000 50463 71250 67214 72793 63964 71051 68974 51324 59707 56391 TRUE FALSE 54326.48608 67711.82861 69454.88121 66845.57905 61452.45197 73754.89559 59917.63095 58032.22302 64900.20693 54550.96629 0.995884945 1.241258097 1.273210833 1.22537846 1.126514453 1.352036464 1.098378911 1.063816592 1.189716908 1 15.73531713 -8.575501598 0.672547283 1.006633237 1.200013305 0.216842023 0.100139313 1.241776506 1.272832693 0.100810137 0.040265084 2.66E-09 8.575501598 0.193380068 LGGLRPESPESLT(ph)SVSR ddPTM_A459_MK2206_30min_R1 2 LGGLRPESPESLTSVSR 17 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LGGLRPES(0.174)PES(0.305)LT(0.477)S(0.044)VSR;LGGLRPES(0.171)PES(0.229)LT(0.599)SVSR 206.49 6.10E-08 973410000 5870.7 5455.5 6400.5 5372.1 5934.9 5505.5 6013 5649.1 5580.1 5577.8 TRUE FALSE 5371.366137 5100.345958 5966.051893 5785.860073 5698.500366 5817.216652 5611.883741 5599.710514 6160.171364 6268.819974 0.856838473 0.813605428 0.95170254 0.922958403 0.909022813 0.927960394 0.895205759 0.89326389 0.982668411 1 12.61397818 -1.522878745 0.079513424 1.068972773 0.502770164 0.528044741 0.036316358 177.9690917 1.036318099 1.122502875 11.08163067 0.03 1.522878745 -0.566202609 LGGLRPESPESLTS(ph)VSR ddPTM_A459_MK2206_30min_R2 1 LGGLRPESPESLTSVSR 17 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LGGLRPES(0.11)PES(0.145)LT(0.078)S(0.334)VS(0.334)R 185.14 2.79E-07 526350000 31554 41831 31722 35155 35280 33249 38150 31035 29439 34496 TRUE FALSE 33969.7985 39753.73337 32779.59565 32282.72404 33894.72993 34514.31399 33140.85917 35091.38106 31999.55101 33370.39835 1.017962032 1.191287349 0.982295605 0.967406014 1.015712476 1.034279353 0.993121473 1.051572136 0.958920258 1 15.02628129 -5.288409132 24.99752871 1.002571901 1.104624725 0.437981416 0.047168908 550.5286853 510269.3419 0.011521884 0.023994569 5.15E-06 5.288409132 0.102052823 LGGLRPESPESLTSVS(ph)R ddPTM_A459_MK2206_30min_R2 1 LGGLRPESPESLTSVSR 17 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LGGLRPES(0.014)PES(0.018)LT(0.018)S(0.06)VS(0.89)R 65.265 0.024107 10425000 8782.1 15225 11150 16933 18523 19735 13753 10450 19149 14545 TRUE FALSE 9454.464328 14468.94864 11521.73543 15549.51973 17795.69395 20486.02925 11947.21458 11815.85088 20814.54541 14070.39784 0.671940085 1.028325482 0.818863515 1.105122962 1.264761249 1.455966596 0.849102827 0.839766651 1.479314632 1 13.7803755 -5.814510814 5.684013044 1.143572239 0.858415666 0.280808852 0.221493168 0.277987904 19.14307959 0.064462248 0.098569396 1.53E-06 5.814510814 -0.285156573 LGGPEGPGS(ph)PLLAT ddPTM_A459_MK2206_30min_R1 2 LGGPEGPGSPLLAT 14 0 Q9C086 Q9C086 INO80B INO80 complex subunit B 1 LGGPEGPGS(0.998)PLLAT(0.002);LGGPEGPGS(0.944)PLLAT(0.056) 98.407 0.010416 17389600 9510.6 8901.6 8642.7 7542.3 9324.4 8336.7 9686 8198 8131.8 7423 TRUE FALSE 8701.673528 8322.104222 8056.057604 8123.209253 8952.989403 8808.71675 9039.864613 8126.32575 8977.12971 8342.617281 1.043038801 0.997541172 0.965651106 0.973700336 1.073163146 1.055869693 1.083576569 0.9740739 1.076056759 1 13.02628435 -6.255566575 24.98909577 1.045087018 0.993070466 0.288120198 0.037502872 605.5944449 2576832.51 0.01118561 0.014075844 5.55E-07 6.255566575 -0.052016553 LGGPEGPGS(ph)PLLAT ddPTM_A459_MK2206_30min_R2 1 LGGPEGPGSPLLAT 14 0 Q9C086 Q9C086 INO80B INO80 complex subunit B 1 LGGPEGPGS(0.984)PLLAT(0.016) 84.352 0.02598 5041800 51244 54515 46789 58409 57800 60561 60886 44421 57226 54670 TRUE FALSE 55167.28004 51807.86437 48348.92191 53636.79786 55530.48158 62865.69129 52891.59506 50226.97722 62203.41404 52886.12238 1.043133388 0.979611702 0.914208109 1.014194186 1.050001004 1.188699199 1.000103481 0.949719415 1.176176495 1 15.69060158 -6.120102952 3.736435857 1.061412066 0.977483211 0.18832337 0.076199673 0.410135406 10.20348653 0.023499672 0.031464889 7.58E-07 6.120102952 -0.083928855 LGGS(ph)AVISLEGKPL ddPTM_A459_MK2206_30min_R1 1 LGGSAVISLEGKPL 14 1 P23528;G3V1A4;E9PK25 P23528 CFL1 Cofilin-1 1 LGGS(0.998)AVIS(0.002)LEGKPL 132.51 0.0038081 26781000 4353.4 3091.8 4261.1 3195.5 4310.1 3594 3466.9 3558.5 3074.6 2573.5 TRUE FALSE 3983.120469 2890.523258 3971.868404 3441.617964 4138.41959 3797.489174 3235.629427 3527.38841 3394.215673 2892.324609 1.377134661 0.999377196 1.373244342 1.189914145 1.430828192 1.312954003 1.11869512 1.219568647 1.173525151 1 11.49801376 -8.702347194 0.763655325 1.001419221 1.264227548 0.302943577 0.121466821 1.175025626 1.441803921 0.118517043 0.043189908 1.98E-09 8.702347194 0.262808327 LGGS(ph)AVISLEGKPL ddPTM_A459_MK2206_30min_R2 1 LGGSAVISLEGKPL 14 1 P23528;G3V1A4;E9PK25 P23528 CFL1 Cofilin-1 1 LGGS(0.918)AVIS(0.082)LEGKPL 101.2 0.040148 18476000 41450 43955 38841 46493 38596 28897 44673 42965 33053 42776 TRUE FALSE 44623.44387 41772.25862 40135.93955 42694.37318 37080.52711 29996.69558 38807.38144 48580.67302 35927.89019 41380.22262 1.078376119 1.009473994 0.969930489 1.031757938 0.896092983 0.724904162 0.937824375 1.174007048 0.868238205 1 15.33665379 -4.973841419 1.064244709 0.941743845 1.111368114 0.128518996 0.109088506 3.189998223 3.688129586 0.038722006 0.569919883 1.06E-05 4.973841419 0.169624268 LGGSAES(ph)LIPGFQSTQGDAFATTSFSAGTAEK ddPTM_A459_MK2206_30min_R1 1 LGGSAESLIPGFQSTQGDAFATTSFSAGTAEK 32 0 Q2M2I8-2;Q2M2I8;A0A096LP25 Q2M2I8-2;A0A096LP25 AAK1 AP2-associated protein kinase 1 1 LGGS(0.143)AES(0.58)LIPGFQS(0.138)T(0.138)QGDAFATTSFSAGTAEK 54.681 0.01816 0 807.36 948.06 885.74 811.79 882.86 563.8 707.11 776.22 754.1 668.97 TRUE FALSE 738.6897924 886.3411217 825.6184366 874.3142065 847.6938167 595.7218688 659.9399821 769.4335904 832.4913936 751.8470541 0.982500082 1.178884877 1.098120199 1.162888385 1.127481729 0.792344488 0.877758287 1.023391109 1.107261629 1 9.554295399 -6.695354366 24.99999844 0.956460398 1.116085144 0.391912524 0.093100269 59.7233001 22592.64521 0.032198208 0.032198198 2.02E-07 6.695354366 0.159624746 LGHDPYRLT(ph)PDPYR ddPTM_A459_MK2206_30min_R2 2 LGHDPYRLTPDPYR 14 1 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-6 P18583-10 SON Protein SON 1 LGHDPY(0.001)RLT(0.987)PDPY(0.013)R;LGHDPY(0.001)RLT(0.985)PDPY(0.015)R 71.98 0.030186 13557300 20015.5 29426 23705 35969 32112 32639 37629 27487 31655 32390 TRUE FALSE 21547.90207 27964.74763 24495.31287 33030.21764 30851.12153 33881.10002 32688.2671 31079.64528 34408.29468 31333.11695 0.687703751 0.892498109 0.781770703 1.054163162 0.984617061 1.08131917 1.043249771 0.991910423 1.098144648 1 14.93540067 -5.761117616 24.99986555 1.035887898 0.797841534 0.794648558 0.057902704 3.530074606 274223.973 0.015087832 0.024183297 1.73E-06 5.761117616 -0.238046364 LGHPEALSAGTGS(ph)PQPPSFTYAQQR ddPTM_A459_MK2206_30min_R1 4 LGHPEALSAGTGSPQPPSFTYAQQR 25 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 LGHPEALSAGT(0.024)GS(0.976)PQPPSFTYAQQR;LGHPEALSAGT(0.001)GS(0.999)PQPPSFTYAQQR;LGHPEALSAGT(0.017)GS(0.983)PQPPSFTYAQQR;LGHPEALSAGTGS(1)PQPPSFTYAQQR 229.98 3.75E-39 207614000 9946.2 8016.3 8860.22 7647.04 9971.6 9691.87 10448.6 9904.24 7446.4 7120.94 TRUE FALSE 9100.22346 7494.437413 8258.812952 8236.016346 9574.410057 10240.6153 9751.592959 9817.648274 8220.479927 8003.135808 1.137082224 0.936437616 1.031947121 1.029098661 1.196332324 1.27957535 1.218471508 1.226725187 1.02715737 1 12.96634968 -6.256429091 23.39469847 1.178477868 1.026577233 0.277656989 0.094652374 187.1426297 873826.7142 0.027737557 0.034615532 5.54E-07 6.256429091 -0.151900635 LGHPEALSAGTGS(ph)PQPPSFTYAQQR ddPTM_A459_MK2206_30min_R2 4 LGHPEALSAGTGSPQPPSFTYAQQR 25 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 LGHPEALSAGT(0.069)GS(0.931)PQPPSFTYAQQR;LGHPEALSAGT(0.002)GS(0.998)PQPPSFTYAQQR;LGHPEALSAGT(0.002)GS(0.964)PQPPS(0.031)FT(0.003)Y(0.001)AQQR;LGHPEALSAGTGS(0.998)PQPPS(0.001)FTYAQQR 181.49 7.14E-21 397129000 39169.1 50205.1 39262.6 58163 62685 57541 60862 39064.9 55022 50464 TRUE FALSE 42167.91641 47711.98774 40571.59549 53410.89685 60223.67193 59730.76308 52870.74629 44170.81656 59807.7141 48817.36381 0.863789298 0.977356908 0.831089439 1.094096294 1.233652685 1.223555686 1.083031572 0.904817735 1.225131991 1 15.57510677 -5.818867534 7.474278044 1.114953413 0.899780318 0.478605846 0.104290636 0.202134867 22.16247698 0.030538721 0.045750672 1.52E-06 5.818867534 -0.215173095 LGHVVMGNNAVS(ph)PYQQVIEK ddPTM_A459_MK2206_30min_R1 2 LGHVVMGNNAVSPYQQVIEK 20 0 P60228;H0YAW4;E5RGA2 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E 1 LGHVVMGNNAVS(1)PYQQVIEK;LGHVVMGNNAVS(1)PYQQVIEK 193.76 1.09E-15 51815000 11841.7 12231.6 13453.1 10900 12470.1 12147.2 12792.9 11672.6 10546.9 9870.6 TRUE FALSE 10834.50123 11435.32062 12539.94105 11739.51989 11973.38951 12834.96397 11939.50898 11570.54769 11643.288 11093.44445 0.976657997 1.030817856 1.130392018 1.05823939 1.079321176 1.156986365 1.076267073 1.043007674 1.049564727 1 13.43741976 -1.58281662 19.0966567 1.066077823 0.007816572 0 0.052107284 0 0 0.012239987 0 0.026132646 1.58281662 -1.058261251 LGHVVMGNNAVS(ph)PYQQVIEK ddPTM_A459_MK2206_30min_R2 1 LGHVVMGNNAVSPYQQVIEK 20 0 P60228;H0YAW4;E5RGA2 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E 1 LGHVVMGNNAVS(1)PYQQVIEK 133.41 8.80E-05 10580000 51968 64571 55225 74405 59036 65496 63490 43504 59025 62211 TRUE FALSE 55946.71004 61364.49804 57066.17394 68325.87349 56717.95001 67988.49618 55153.68673 49190.12217 64158.88781 60181.06016 0.929639822 1.019664623 0.94824142 1.135338482 0.942455149 1.129732444 0.916462531 0.817368821 1.066097666 1 15.8770219 LGIAVIHGEAQDAES(ph)DLVDGRHSPPMVR ddPTM_A459_MK2206_30min_R1 2 LGIAVIHGEAQDAESDLVDGRHSPPMVR 28 1 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 LGIAVIHGEAQDAES(0.586)DLVDGRHS(0.414)PPMVR;LGIAVIHGEAQDAES(0.759)DLVDGRHS(0.241)PPMVR 76.807 7.02E-05 34386000 5270 5154.4 4960.9 4374.4 6108.5 5418.6 5173.2 4736.6 4876.8 3896.8 TRUE FALSE 4821.758826 4818.847623 4624.16793 4711.317046 5865.18551 5725.396449 4828.105267 4695.188406 5383.760812 4379.565003 1.100967521 1.100302797 1.055850964 1.075749999 1.339216453 1.307297973 1.102416624 1.072067295 1.229291221 1 12.09657187 -2.217145171 20.55119573 1.144510685 0.278620576 0 0.107675434 0 0 0.026075983 0 0.006065336 2.217145171 -0.865890109 LGIAVIHGEAQDAES(ph)DLVDGRHSPPMVR ddPTM_A459_MK2206_30min_R2 1 LGIAVIHGEAQDAESDLVDGRHSPPMVR 28 1 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 LGIAVIHGEAQDAES(0.5)DLVDGRHS(0.5)PPMVR 52.522 0.0069257 14070000 10085 15675 15825 16667 12805 11675 11403 9184 11275 15425 TRUE FALSE 10857.11535 14896.60229 16352.5976 15305.25278 12302.21136 12119.30031 9905.772403 10384.38033 12255.67912 14921.68351 0.727606596 0.998319143 1.09589495 1.025705496 0.824451969 0.812193899 0.663850858 0.695925518 0.821333538 1 13.86512269 -6.423234638 3.889466789 0.774444149 0.973280365 0.273397761 0.123342785 0.272507952 7.391545261 0.040507985 0.045646055 3.77E-07 6.423234638 0.198836215 LGIAVIHGEAQDAESDLVDGRHS(ph)PPMVR ddPTM_A459_MK2206_30min_R1 12 LGIAVIHGEAQDAESDLVDGRHSPPMVR 28 1 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 LGIAVIHGEAQDAES(0.058)DLVDGRHS(0.942)PPMVR;LGIAVIHGEAQDAES(0.242)DLVDGRHS(0.758)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.036)DLVDGRHS(0.964)PPMVR;LGIAVIHGEAQDAES(0.015)DLVDGRHS(0.985)PPMVR;LGIAVIHGEAQDAES(0.101)DLVDGRHS(0.899)PPMVR;LGIAVIHGEAQDAES(0.013)DLVDGRHS(0.987)PPMVR;LGIAVIHGEAQDAES(0.029)DLVDGRHS(0.971)PPMVR;LGIAVIHGEAQDAES(0.17)DLVDGRHS(0.83)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.361)DLVDGRHS(0.639)PPMVR;LGIAVIHGEAQDAES(0.004)DLVDGRHS(0.996)PPMVR 112.36 1.33E-10 114181100 29869.35 27826.91 30492.35 26101.43 33535.95 30631.86 32307.38 28979.17 24382.64 22919.98 TRUE FALSE 27328.80493 26015.3731 28422.61424 28111.76666 32200.1421 32366.20944 30152.21363 28725.80817 26917.30268 25759.48016 1.060922222 1.009933933 1.10338462 1.091317313 1.250030742 1.256477586 1.170528809 1.115154809 1.044947434 1 14.65281586 -5.658666207 2.160918329 1.15153283 1.038453683 0.172557507 0.078197378 0.465853997 4.395412113 0.024284316 0.051547417 2.19E-06 5.658666207 -0.113079146 LGIAVIHGEAQDAESDLVDGRHS(ph)PPMVR ddPTM_A459_MK2206_30min_R2 14 LGIAVIHGEAQDAESDLVDGRHSPPMVR 28 1 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 LGIAVIHGEAQDAES(0.004)DLVDGRHS(0.996)PPMVR;LGIAVIHGEAQDAES(0.062)DLVDGRHS(0.938)PPMVR;LGIAVIHGEAQDAES(0.033)DLVDGRHS(0.967)PPMVR;LGIAVIHGEAQDAES(0.025)DLVDGRHS(0.975)PPMVR;LGIAVIHGEAQDAES(0.029)DLVDGRHS(0.971)PPMVR;LGIAVIHGEAQDAES(0.003)DLVDGRHS(0.997)PPMVR;LGIAVIHGEAQDAES(0.036)DLVDGRHS(0.964)PPMVR;LGIAVIHGEAQDAES(0.019)DLVDGRHS(0.981)PPMVR;LGIAVIHGEAQDAES(0.097)DLVDGRHS(0.903)PPMVR;LGIAVIHGEAQDAES(0.007)DLVDGRHS(0.993)PPMVR;LGIAVIHGEAQDAES(0.003)DLVDGRHS(0.997)PPMVR;LGIAVIHGEAQDAES(0.019)DLVDGRHS(0.981)PPMVR;LGIAVIHGEAQDAES(0.104)DLVDGRHS(0.896)PPMVR;LGIAVIHGEAQDAES(0.248)DLVDGRHS(0.752)PPMVR 83.064 3.49E-05 139227900 190790.7 249258.5 225500.1 275711.5 266344.9 277475.8 262593.6 209542.3 244982.7 228969.7 TRUE FALSE 205397.7827 236880.6853 233018.1608 253184.9885 255886.861 288035.336 228114.7449 236930.1981 266290.8524 221498.4374 0.927310301 1.069446304 1.052008147 1.143055416 1.155253572 1.300394438 1.029870673 1.06966984 1.202224519 1 17.756937 -4.421346866 1.036414818 1.132710198 0.678878908 0.330069968 0.083531685 4.058496976 2.14759335 0.026871346 2.434995155 3.79E-05 4.421346866 -0.45383129 LGIHEDS(ph)QNR ddPTM_A459_MK2206_30min_R1 1 LGIHEDSQNR 10 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 LGIHEDS(1)QNR 153.74 0.00058402 6950900 2086.9 1741.6 1945.1 1592.5 2165.7 2162.5 2684.1 2047.9 1715.7 1539.8 TRUE FALSE 1909.398196 1628.221523 1813.072031 1715.154626 2079.435583 2284.938881 2505.048586 2029.995426 1894.053155 1730.562049 1.103339922 0.94086284 1.047678142 0.991096868 1.201595507 1.320344961 1.447534683 1.173026664 1.094472837 1 10.75702495 -6.322377124 5.018121548 1.234967666 1.016834343 0.347513459 0.121087833 0.21812975 11.37709667 0.038945888 0.044846512 4.76E-07 6.322377124 -0.218133324 LGIHEDS(ph)QNR ddPTM_A459_MK2206_30min_R2 1 LGIHEDSQNR 10 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 LGIHEDS(1)QNR 73.082 0.043836 5983000 24805 38674 32532 31877 35639 31160 30972 21448 34757 31529 TRUE FALSE 26704.08987 36753.5054 33616.60064 29272.54713 34239.63379 32345.81563 26905.3392 24251.32724 37780.10103 30500.21131 0.875537864 1.205024615 1.102175991 0.959748994 1.122603166 1.060511198 0.882136157 0.795119975 1.238683255 1 14.89653162 -7.178100105 11.92076081 0.961933173 1.062176722 0.061777355 0.135358154 2.056998459 289.4671462 0.050318535 0.038975815 6.64E-08 7.178100105 0.100243549 LGIHEDS(ph)TNR ddPTM_A459_MK2206_30min_R2 2 LGIHEDSTNR 10 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 LGIHEDS(0.771)T(0.229)NR;LGIHEDS(0.769)T(0.231)NR 113.95 0.0048406 16478000 90052 113883 88033 111800 115242 129009 123453 102373 97835 109929 TRUE FALSE 96946.45036 108227.7358 90967.97628 102665.5824 110717.02 133918.5279 107243.4728 115753.5026 106344.5115 106342.0257 0.911647579 1.017732501 0.855428281 0.965428124 1.041140784 1.259318947 1.008476866 1.088501952 1.000023375 1 16.69835233 -6.272000965 3.825539443 1.079273492 0.935083225 0.381908254 0.080513739 0.228633278 7.620033268 0.02510277 0.030611297 5.35E-07 6.272000965 -0.144190267 LGIHEDSQNR ddPTM_A459_MK2206_30min_R1 6 LGIHEDSQNR 10 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;;;;; 169.76 0.00031678 91943000 41772.1 33454.3 37677.7 32067.2 45530 40623.9 43438.6 38354.2 30277.2 28534.2 FALSE TRUE 38219.16354 31276.41899 35120.2427 34537.0213 43716.44369 42923.99011 40540.89025 38018.87327 33424.62329 32069.23212 1.191770461 0.975278076 1.095138249 1.076951926 1.3631896 1.338478887 1.264167789 1.185524902 1.042264535 1 14.96890219 -4.44274751 22.64133716 1.162161246 3.125833102 0.0005139 0.130307724 7604.925162 2134051.879 0.034230818 5263.230598 3.61E-05 4.44274751 1.963671856 LGIHEDSQNR ddPTM_A459_MK2206_30min_R2 5 LGIHEDSQNR 10 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;;;; 189.18 9.93E-05 358404000 882053 1186875 1015388 1268334 1267007 1335130 1361230 1006436 1080776 1096107 FALSE TRUE 949583.6559 1127936.513 1049240.529 1164707.055 1217257.939 1385939.308 1182498.866 1137980.641 1174779.943 1060341.118 0.895545442 1.063748726 0.989531115 1.098426756 1.147987113 1.307069285 1.115206084 1.073221269 1.107926423 1 20.01609703 -5.840749711 2.898954256 1.137112032 0.987314085 0.370449375 0.08225038 0.281287457 4.773223358 0.024938123 0.041422689 1.44E-06 5.840749711 -0.149797948 LGIHEDSQNRK ddPTM_A459_MK2206_30min_R2 1 LGIHEDSQNRK 11 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 70.028 0.045503 9471200 74342 111600 111640 125470 135420 122020 122130 99082 108700 119710 FALSE TRUE 80033.68068 106058.1063 115362.0219 115218.6996 130102.7304 126663.5566 106094.1843 112032.3576 118154.5295 115803.8725 0.691114027 0.915842484 0.996184492 0.994946863 1.123474782 1.093776519 0.916154028 0.967431876 1.020298605 1 16.82132397 -4.629701402 1.578135294 1.017744497 0.468535192 0.758142963 0.055463865 0.830434838 1.487002981 0.017244992 0.78998663 2.35E-05 4.629701402 -0.549209305 LGIHEDST(ph)NR ddPTM_A459_MK2206_30min_R1 1 LGIHEDSTNR 10 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 LGIHEDS(0.237)T(0.763)NR 161.67 0.00098591 10400000 2013.8 2558.1 2294.6 1793.3 2005.4 1835.2 2859.5 1978.4 1645.3 1531.3 TRUE FALSE 1842.515735 2391.567225 2138.848945 1931.420277 1925.520671 1939.107438 2668.747972 1961.103057 1816.334823 1721.009005 1.070602031 1.389630861 1.242787771 1.122260413 1.118832421 1.126727073 1.550687977 1.139507726 1.055389494 1 10.74903893 -8.138543291 4.112329572 1.029300991 1.231848579 0.249695944 0.138786544 0.335929519 9.232240896 0.106474443 0.036652101 7.27E-09 8.138543291 0.202547589 LGIHEDSTNR ddPTM_A459_MK2206_30min_R1 4 LGIHEDSTNR 10 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;;; 228.2 1.13E-05 296808000 55202.1 47810.8 52887.6 41800.2 61887 53776.4 58276.9 52403.7 40466.6 39271.3 FALSE TRUE 50506.87152 44698.30823 49297.73707 45019.65865 59421.90974 56821.1733 54389.35433 51945.53998 44673.24788 44136.52513 1.144332758 1.012728304 1.116937433 1.020009131 1.346320526 1.287395714 1.232298061 1.176928628 1.012160512 1 15.42968543 -6.219526733 24.99948292 1.193096823 1.072263467 0.16559357 0.108469813 785.9644702 468800.8524 0.032446016 0.041887405 6.03E-07 6.219526733 -0.120833356 LGIHEDSTNR ddPTM_A459_MK2206_30min_R2 6 LGIHEDSTNR 10 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;;;;; 204.34 0.00017961 230865000 570156 772149 641500 778177 776547 817000 810279 611973 705636 665020 FALSE TRUE 613807.5817 733805.2035 662887.2898 714597.4498 746055.8629 848091.5075 703888.394 691959.9723 767010.9438 643320.4519 0.954124154 1.140652689 1.030415383 1.11079548 1.159695546 1.318303351 1.094148945 1.075606986 1.192268863 1 19.29517803 -4.75929073 24.92527171 1.129832116 0.95412392 0.265481261 0.08470229 76.29476206 884832.7364 0.021495901 0.137286423 1.74E-05 4.75929073 -0.175708196 LGIHEDSTNRR ddPTM_A459_MK2206_30min_R1 2 LGIHEDSTNRR 11 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 114.86 0.0042817 43501000 12711.5 9941.4 11693.5 9662.9 14755.6 13465.4 13430.6 11589.5 8606.8 7836 FALSE TRUE 11630.32017 9294.213053 10899.7778 10407.13823 14167.85321 14227.79931 12534.66918 11488.17422 9501.50766 8806.782839 1.320609397 1.055347137 1.237657156 1.181718503 1.608743336 1.615550147 1.42329718 1.304468889 1.078885199 1 13.10439938 -8.299610689 3.051370033 1.007125391 1.3483748 0.358805063 0.164912414 0.323831937 5.676914179 0.176167164 0.049310145 5.02E-09 8.299610689 0.341249409 LGIHEDSTNRR ddPTM_A459_MK2206_30min_R2 3 LGIHEDSTNRR 11 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;; 101.46 0.010292 42997600 140893 199472 156155 232096 225727 212858 201221 183575 219590 173137 FALSE TRUE 151679.8764 189566.5105 161361.1298 213133.0144 216863.8238 220958.4603 174800.441 207568.8828 238689.5413 167487.5539 0.905618793 1.131824462 0.963421616 1.272530462 1.294805607 1.319253015 1.043662272 1.239309298 1.42511808 1 17.35369437 -5.763652207 24.9999155 1.236711115 1.013441885 0.389911172 0.12977574 58.98911973 666456.446 0.035340355 0.055421627 1.72E-06 5.763652207 -0.22326923 LGIYDADGDGDFDVDDAK ddPTM_A459_MK2206_30min_R2 2 LGIYDADGDGDFDVDDAK 18 0 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2;Q12797-10;E5RHK2;G3XAN5;E5RG29;Q12797-4;Q12797-3;Q12797-9;Q12797-5;Q12797-8 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 0 ; 200.01 1.13E-20 0 14327.9 9675.8 13388.8 10993 7456 10669.9 14976.4 9396.4 9977.5 8694 FALSE TRUE 15424.85504 9195.313842 13835.17591 10094.83674 7163.239977 11075.95052 13009.98069 10624.54174 10845.32491 8410.315492 1.834040002 1.093337563 1.645024604 1.200292277 0.851720721 1.31694828 1.546907569 1.263275052 1.289526526 1 13.03794421 -4.750710584 24.98672242 1.263914574 1.834041214 0.381161876 0.223941499 526.6184206 1226381.996 0.056692282 0.809206948 1.78E-05 4.750710584 0.57012664 LGLGIDEDDPTADDTSAAVTEEMPPLEGDDDTSR ddPTM_A459_MK2206_30min_R2 1 LGLGIDEDDPTADDTSAAVTEEMPPLEGDDDTSR 34 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 125.14 9.81E-25 2111500 7112.6 7259.6 5314.5 9149 8906.5 7585 8194 6088.5 7628.7 8053.9 FALSE TRUE 7657.146125 6899.09882 5491.682778 8401.497434 8556.786058 7873.65249 7118.117957 6884.287855 8292.230536 7791.101903 0.982806568 0.885510022 0.704865993 1.078345212 1.098276748 1.010595496 0.913621468 0.883609012 1.064320637 1 12.92761167 -5.783474778 24.99990242 1.002183676 0.860505612 0.366063224 0.089822455 275.0444691 312046.2631 0.027159657 0.04032059 1.65E-06 5.783474778 -0.141678064 LGLGIDEDEVAAEEPNAAVPDEIPPLEGDEDASR ddPTM_A459_MK2206_30min_R1 2 LGLGIDEDEVAAEEPNAAVPDEIPPLEGDEDASR 34 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 161.14 2.07E-30 19551900 3824.6 3957.9 4381 3544.7 3915.6 4115.5 4642.6 4151.6 3210.9 3419.1 FALSE TRUE 3499.297686 3700.239991 4083.629926 3817.713408 3759.633361 4348.516053 4332.900625 4115.302999 3544.684545 3842.683921 0.910638959 0.962931135 1.06270253 0.993501804 0.978387356 1.131635113 1.127571436 1.070944965 0.922450198 1 11.9078986 -5.04948689 2.981814897 1.041635253 0.912729514 0.296663326 0.062683467 0.342330749 5.702692959 0.017492834 0.07699365 8.92E-06 5.04948689 -0.128905739 LGLGIDEDEVAAEEPNAAVPDEIPPLEGDEDASR ddPTM_A459_MK2206_30min_R2 2 LGLGIDEDEVAAEEPNAAVPDEIPPLEGDEDASR 34 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 154.66 3.36E-28 7602900 16663 22212.9 18022.4 23648.3 22376.5 22138 19878.4 16602.2 20377.1 21375.2 FALSE TRUE 17938.73209 21109.83969 18623.25782 21716.15824 21497.88618 22980.4771 17268.3422 18772.16454 22149.46332 20677.72897 0.867538796 1.020897397 0.900643288 1.050219696 1.039663795 1.111363687 0.835117929 0.907844598 1.071174854 1 14.33579012 -4.752077289 24.70304497 0.989238398 0.867538516 0.172724663 0.081996879 635.1197362 1675702.915 0.021033418 0.257319462 1.77E-05 4.752077289 -0.121699882 LGLGT(ph)VVGLVNKDLGKKLGST(ph)VGLVAK ddPTM_A459_MK2206_30min_R2 1 LGLGTVVGLVNKDLGKKLGSTVGLVAK 27 3 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 2 LGLGT(0.997)VVGLVNKDLGKKLGS(0.19)T(0.813)VGLVAK 41.904 0.039844 1996200 4833.6 6099.3 6026.8 5074.6 6599.3 5644.8 8350.4 4328.7 4360.5 4991 TRUE FALSE 5203.664132 5796.417631 6227.730504 4659.988947 6340.178323 5859.616819 7253.982449 4894.475953 4739.768408 4828.144079 1.077777309 1.200547775 1.289880833 0.96517189 1.313170904 1.213637523 1.50243703 1.013738586 0.981695726 1 12.23725301 -10.00929146 8.029849379 0.999999998 1.181551684 0.092251605 0.160968803 0 0 0.157474275 0.038193122 9.79E-11 10.00929146 0.181551687 LGLGTLSSS(ph)LSR ddPTM_A459_MK2206_30min_R1 1 LGLGTLSSSLSR 12 0 O95248;O95248-5;O95248-4 O95248 SBF1 Myotubularin-related protein 5 1 LGLGT(0.001)LS(0.052)S(0.052)S(0.873)LS(0.021)R 106.79 0.010056 0 2214.7 2114.7 2540.5 2148.9 2176.3 2240.9 2091.7 1952.1 1936.1 1590.1 TRUE FALSE 2026.328135 1977.032646 2368.057938 2314.40865 2089.613363 2367.777821 1952.16651 1935.032996 2137.364523 1787.093593 1.133867943 1.106283775 1.325088931 1.295068518 1.169280317 1.324932187 1.092369486 1.082782124 1.196000328 1 10.80339948 -7.295182254 24.08488028 1.099686435 1.225422126 0.376449252 0.083646527 496.390578 354309.5858 0.035967442 0.024251331 5.07E-08 7.295182254 0.12573569 LGLHS(ph)LR ddPTM_A459_MK2206_30min_R2 4 LGLHSLR 7 0 P61204-2;P84077;P61204;H0YGG7 P61204-2 ARF3;ARF1 ADP-ribosylation factor 3;ADP-ribosylation factor 1 1 LGLHS(1)LR;LGLHS(1)LR;LGLHS(1)LR;LGLHS(1)LR 80.455 0.029674 14127400 116895 125990 114139 142099 132193 125050 148538 124062 111268 123684 TRUE FALSE 125844.5711 119733.5198 117944.3373 130489.0571 127002.4386 129808.8654 129034.7822 140277.3294 120945.8895 119648.2012 1.051788241 1.000713079 0.985759385 1.090606092 1.061465507 1.084921161 1.078451501 1.172414862 1.010845866 1 16.86843918 -5.768811391 24.99320167 1.078890339 1.011549517 0.231470893 0.047412803 197.7817724 670538.4235 0.012769447 0.019383243 1.70E-06 5.768811391 -0.067340822 LGLHVTPSNVDQVS(ph)TPPAAK ddPTM_A459_MK2206_30min_R1 2 LGLHVTPSNVDQVSTPPAAK 20 0 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 LGLHVTPSNVDQVS(0.9)T(0.1)PPAAK;LGLHVTPSNVDQVS(0.633)T(0.367)PPAAK 142.04 3.55E-05 21003000 13356.1 9012.4 11253.3 8649.5 13660.1 13872.9 12794.2 10899.3 9024.5 7540.8 TRUE FALSE 12220.09356 8425.691122 10489.45735 9315.685989 13115.98929 14658.37161 11940.72226 10804.00857 9962.629069 8475.011234 1.441897034 0.994180525 1.237692442 1.09919453 1.547607304 1.729599077 1.408932913 1.274807581 1.175529895 1 13.04899957 -2.487565217 22.2277286 1.306120508 42.76418167 0 0.22873721 0 0 0.055420854 0 0.003254129 2.487565217 41.45806116 LGLHVTPSNVDQVS(ph)TPPAAK ddPTM_A459_MK2206_30min_R2 2 LGLHVTPSNVDQVSTPPAAK 20 0 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 LGLHVTPSNVDQVS(0.5)T(0.5)PPAAK;LGLHVTPSNVDQVS(0.848)T(0.152)PPAAK 136.67 6.65E-05 11282100 50370 76305 63569 89246 79490 80721 92869 63737 70473 69820 TRUE FALSE 54226.36593 72515.80466 65688.35873 81954.31632 76368.82319 83792.89422 80675.18874 72067.64474 76602.61415 67541.77912 0.802856641 1.073643686 0.972558905 1.213386994 1.130690133 1.240608336 1.194448678 1.067008386 1.13415156 1 16.04349256 -4.098731109 0.952721399 1.142755031 1.37E-14 0.575298854 0.081672915 4.450403944 1.268373292 0.02633083 7.167134559 7.97E-05 4.098731109 -1.142755031 LGLHVTPSNVDQVST(ph)PPAAK ddPTM_A459_MK2206_30min_R2 2 LGLHVTPSNVDQVSTPPAAK 20 0 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 LGLHVTPSNVDQVS(0.234)T(0.766)PPAAK;LGLHVTPSNVDQVS(0.076)T(0.924)PPAAK 135.33 0.00015201 30290000 98600 155350 109759 178035 178876 175117 196614 135353 147201 154188 TRUE FALSE 106148.8918 147635.5449 113418.3103 163488.971 171852.4295 181781.2001 170798.3456 153044.1018 160004.2769 149156.8582 0.711659478 0.989800581 0.760396214 1.096087521 1.152159086 1.218725055 1.145092138 1.026061448 1.072724907 1 17.18647079 -5.77402361 24.26022842 1.111441263 0.837536968 0.670403916 0.089846396 88.82802232 171245.1406 0.025100728 0.037538457 1.68E-06 5.77402361 -0.273904296 LGLPLLTDCAQPS(ph)RPHGSPSR ddPTM_A459_MK2206_30min_R2 1 LGLPLLTDCAQPSRPHGSPSR 21 1 U3KQ90;P55199 U3KQ90 ELL RNA polymerase II elongation factor ELL 1 LGLPLLTDCAQPS(0.432)RPHGS(0.432)PS(0.135)R 84.403 0.0005045 13242000 18722 24653 20632 26588 27859 26716 29539 22592 25850 25579 TRUE FALSE 20155.37071 23428.76787 21319.86058 24415.67535 26765.11568 27732.6961 25660.49382 25544.85197 28098.38627 24744.35932 0.814544052 0.946832672 0.861604873 0.986716812 1.081665333 1.120768404 1.037023973 1.03235051 1.135547132 1 14.59481207 -5.97336326 3.022625986 1.07005856 0.881144485 0.756288742 0.049011839 0.121515547 2.278880099 0.014295871 0.021568057 1.06E-06 5.97336326 -0.188914075 LGLPLLTDCAQPSRPHGS(ph)PSR ddPTM_A459_MK2206_30min_R1 1 LGLPLLTDCAQPSRPHGSPSR 21 1 U3KQ90;P55199 U3KQ90 ELL RNA polymerase II elongation factor ELL 1 LGLPLLTDCAQPS(0.006)RPHGS(0.872)PS(0.122)R 90.1 0.00041846 17391000 1144.9 1107.6 1231.2 1132.2 1170.4 1233.3 1223.5 1083.7 1066.2 845.73 TRUE FALSE 1047.520243 1035.495039 1147.629574 1219.40224 1123.78049 1303.12838 1141.882547 1074.225325 1177.035305 950.5054173 1.102066568 1.089415189 1.207388778 1.28289878 1.182297827 1.370984696 1.201342493 1.130162233 1.23832572 1 9.892551039 -5.275869315 7.361018741 1.214715538 1.095469975 0.164652839 0.091778927 0.216693611 72.86411028 0.023063634 0.051567092 5.30E-06 5.275869315 -0.119245563 LGLPLLTDCAQPSRPHGS(ph)PSR ddPTM_A459_MK2206_30min_R2 1 LGLPLLTDCAQPSRPHGSPSR 21 1 U3KQ90;P55199 U3KQ90 ELL RNA polymerase II elongation factor ELL 1 LGLPLLTDCAQPS(0.083)RPHGS(0.54)PS(0.377)R 67.097 0.0037601 16300000 27590 42500 36149 41970 45304 47747 46669 30005 34549 35902 TRUE FALSE 29702.31161 40389.5118 37354.18962 38540.91674 43525.13733 49564.04554 40541.30424 33926.75652 37554.00957 34730.52068 0.85522218 1.162940002 1.075543611 1.109713186 1.25322444 1.42710344 1.16731058 0.976857123 1.08129705 1 15.08391642 -4.759800089 24.93986799 1.149116287 0.855221806 0.320617252 0.123333442 53.44715571 812876.1777 0.033524327 0.207512171 1.74E-05 4.759800089 -0.293894481 LGLPLLTDCAQPSRPHGSPS(ph)R ddPTM_A459_MK2206_30min_R2 1 LGLPLLTDCAQPSRPHGSPSR 21 1 U3KQ90;P55199 U3KQ90 ELL RNA polymerase II elongation factor ELL 1 LGLPLLTDCAQPS(0.003)RPHGS(0.37)PS(0.628)R 103.35 0.00010297 15974000 8789.7 13322 11048 13012 15700 14140 15353 11447 13365 12539 TRUE FALSE 9462.64619 12660.44885 11416.33481 11948.87798 15083.53911 14678.10761 13337.13266 12943.1622 14527.46354 12129.85346 0.780112161 1.043742935 0.941176647 0.985080159 1.243505469 1.210081198 1.099529578 1.067050171 1.197661917 1 13.5662745 -6.091280425 5.575837398 1.141002059 0.938041216 0.54170854 0.090469538 0.179054539 8.595097759 0.026523153 0.034767985 8.10E-07 6.091280425 -0.202960843 LGLVS(ph)PESMDNYSHFHELR ddPTM_A459_MK2206_30min_R2 1 LGLVSPESMDNYSHFHELR 19 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 LGLVS(0.999)PES(0.001)MDNYSHFHELR 111.22 0.00032471 1832500 10380 13348 13072 15035 13529 13106 13685 9491.9 11680 11094 TRUE FALSE 11174.70078 12685.15773 13507.81396 13806.59241 12997.78348 13604.75801 11888.14306 10732.52392 12695.90529 10732.00369 1.041250181 1.181993419 1.258647905 1.286487855 1.21112365 1.267681079 1.107728194 1.000048475 1.182994868 1 13.38963184 -7.435856748 5.377210963 1.065788688 1.21208634 0.41624229 0.079616273 0.224347492 10.51901007 0.034976283 0.023008691 3.67E-08 7.435856748 0.146297652 LGMLS(ph)PEGTCK ddPTM_A459_MK2206_30min_R1 2 LGMLSPEGTCK 11 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 LGMLS(0.991)PEGT(0.009)CK;LGMLS(0.998)PEGT(0.002)CK 103.46 0.013266 67313400 5471.3 6456.9 6154.2 4952.3 5317.7 4365.1 5666.4 5162.4 5261.7 4721.3 TRUE FALSE 5005.937204 6036.554636 5736.470051 5333.727004 5105.884749 4612.24819 5288.404795 5117.265681 5808.672544 5306.210288 0.943411009 1.137639541 1.081086074 1.005185757 0.962246966 0.869217 0.996644405 0.964391798 1.094693242 1 12.37346614 -5.932895766 4.413815651 0.975132127 1.061738976 0.17743655 0.06860971 0.311632331 11.99976352 0.019928789 0.030035443 1.17E-06 5.932895766 0.086606849 LGMLS(ph)PEGTCK ddPTM_A459_MK2206_30min_R2 5 LGMLSPEGTCK 11 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 LGMLS(1)PEGTCK;LGMLS(0.999)PEGT(0.001)CK;LGMLS(0.998)PEGT(0.002)CK;LGMLS(0.996)PEGT(0.004)CK;LGMLS(0.991)PEGT(0.009)CK 152.96 0.00056908 94531000 380296 451894 416877 450951 477106 376702 495460 352128 358655 449200 TRUE FALSE 409411.7542 429453.6011 430775.4711 414106.8608 458372.4212 391037.6586 430405.5068 398152.3386 389850.1636 434542.6408 0.942167041 0.988288745 0.991330725 0.95297175 1.054838762 0.899883284 0.990479337 0.916256085 0.897150537 1 18.72913823 -6.790760819 24.99991991 0.938627725 0.984521365 0.219950372 0.042392819 321.1468017 273812.5441 0.014348752 0.012656271 1.62E-07 6.790760819 0.04589364 LGNPYCS(ph)PTLVR ddPTM_A459_MK2206_30min_R1 4 LGNPYCSPTLVR 12 0 Q6ZV89-2;Q6ZV89 Q6ZV89-2 SH2D5 SH2 domain-containing protein 5 1 LGNPYCS(0.888)PT(0.112)LVR;LGNPYCS(0.763)PT(0.237)LVR;LGNPYCS(0.838)PT(0.162)LVR;LGNPYCS(0.835)PT(0.165)LVR 117.48 0.0047565 103128200 12401.4 12463.8 12431.6 10450.3 12932.9 11563.7 13533.1 11607.5 9553.9 9586 TRUE FALSE 11346.59581 11652.40435 11587.77763 11255.18392 12417.75521 12218.4267 12630.33159 11506.01685 10547.06209 10773.58605 1.053186539 1.081571568 1.075572941 1.044701724 1.152611131 1.134109538 1.172342387 1.067983937 0.978974136 1 13.39521092 -11.36508272 6.883237496 0.992734986 1.088589851 0.178107125 0.053873668 0.006807446 0.000156058 0.059120595 0.013425609 4.31E-12 11.36508272 0.095854865 LGNPYCS(ph)PTLVR ddPTM_A459_MK2206_30min_R2 1 LGNPYCSPTLVR 12 0 Q6ZV89-2;Q6ZV89 Q6ZV89-2 SH2D5 SH2 domain-containing protein 5 1 LGNPYCS(0.713)PT(0.287)LVR 157.09 0.00044141 23141000 43262 46564 46500 49161 47959 50522 54510 43332 44113 46890 TRUE FALSE 46574.17198 44251.69947 48050.28679 45144.38904 46075.88869 52444.65011 47352.77152 48995.64118 47949.869 45359.98314 1.026767842 0.975566929 1.059310067 0.995247042 1.015782756 1.156187602 1.043932741 1.080151221 1.05709627 1 15.46913248 -6.578933434 24.99999312 1.072675532 1.013535254 0.282777791 0.041745938 98.23597305 43811.76864 0.01299218 0.012992181 2.64E-07 6.578933434 -0.059140278 LGNPYCSPT(ph)LVR ddPTM_A459_MK2206_30min_R1 1 LGNPYCSPTLVR 12 0 Q6ZV89-2;Q6ZV89 Q6ZV89-2 SH2D5 SH2 domain-containing protein 5 1 LGNPYCS(0.193)PT(0.807)LVR 98.368 0.035893 19440000 1833 2086.7 1665.5 1747.9 1714.9 1837 1845.4 1541.8 1570.8 1459.7 TRUE FALSE 1677.093725 1950.855451 1552.4505 1882.523561 1646.591902 1941.009352 1722.296733 1528.320205 1734.090281 1640.538656 1.022282357 1.18915543 0.946305346 1.147503324 1.003689791 1.183153683 1.049836117 0.931596582 1.057024944 1 10.67995387 -7.531798968 24.48152117 0.994729691 1.083163062 0.191850936 0.078752102 238.2220109 653786.4047 0.034118036 0.019738476 2.94E-08 7.531798968 0.088433371 LGNPYCSPT(ph)LVR ddPTM_A459_MK2206_30min_R2 2 LGNPYCSPTLVR 12 0 Q6ZV89-2;Q6ZV89 Q6ZV89-2 SH2D5 SH2 domain-containing protein 5 1 LGNPYCS(0.105)PT(0.895)LVR;LGNPY(0.002)CS(0.055)PT(0.943)LVR 136.6 0.0032585 65404000 84252 103355 80469 96959 102196 119434 114426 92434 98959 91021 TRUE FALSE 90702.3979 98222.54099 83151.7963 89037.13954 98183.27155 123979.1446 99401.72875 104515.4412 107566.2749 88050.99222 1.030112161 1.115518843 0.94435956 1.01119973 1.115072858 1.408038018 1.128910944 1.186987659 1.221636148 1 16.42605164 -6.523813285 24.99989022 1.204207099 1.030607599 0.358349507 0.102246237 32.37917785 866137.6792 0.03257791 0.032847694 2.99E-07 6.523813285 -0.1735995 LGNSGAS(ph)PSSAGK ddPTM_A459_MK2206_30min_R1 4 LGNSGASPSSAGK 13 0 Q8IWI9;Q8IWI9-3 Q8IWI9 MGA MAX gene-associated protein 1 LGNS(0.001)GAS(0.996)PS(0.003)SAGK;LGNSGAS(0.949)PS(0.026)S(0.026)AGK;LGNS(0.009)GAS(0.99)PS(0.001)SAGK;LGNS(0.002)GAS(0.989)PS(0.008)S(0.001)AGK 192.4 5.01E-10 40391400 9613.8 9241.1 8114.1 7724 8036.9 7929.2 7092.6 6571.8 7147.9 6052.1 TRUE FALSE 8796.095826 8639.50271 7563.337499 8318.903818 7716.773255 8378.144452 6619.465595 6514.343445 7890.949784 6801.879839 1.293186007 1.270163972 1.11194812 1.223030106 1.134505966 1.231739556 0.97318179 0.957726923 1.160113082 1 12.7317178 -5.871791072 0.342134195 0.99592769 1.373272671 0.53464005 0.079961322 2.603030389 0.424913066 0.089743145 0.383455996 1.34E-06 5.871791072 0.377344981 LGNSGAS(ph)PSSAGK ddPTM_A459_MK2206_30min_R2 4 LGNSGASPSSAGK 13 0 Q8IWI9;Q8IWI9-3 Q8IWI9 MGA MAX gene-associated protein 1 LGNS(0.004)GAS(0.928)PS(0.008)S(0.06)AGK;LGNSGAS(0.978)PS(0.019)S(0.002)AGK;LGNS(0.001)GAS(0.983)PS(0.008)S(0.008)AGK;LGNS(0.027)GAS(0.951)PS(0.019)S(0.003)AGK 170.48 0.00022664 89061000 350752 371761 344298 418608 359006 320820 419001 316544 276147 350787 TRUE FALSE 377605.8428 353299.8893 355776.7235 384406.3873 344909.6206 333029.0299 363985.6654 357917.3877 300165.7669 339340.8489 1.11276271 1.04113575 1.048434707 1.132803164 1.016410555 0.981399767 1.072625552 1.054743008 0.88455536 1 18.37237558 -7.326145561 0.592725926 0.969175302 1.078833335 0.341564568 0.054257768 1.045776572 0.752064754 0.050659387 0.036629074 4.72E-08 7.326145561 0.109658034 LGPELSPSPT(ph)SPTATSTTPSR ddPTM_A459_MK2206_30min_R1 1 LGPELSPSPTSPTATSTTPSR 21 0 M0QY76;P26651 M0QY76 ZFP36 Tristetraprolin 1 LGPELSPS(0.002)PT(0.496)S(0.496)PT(0.005)ATSTTPSR 174.72 6.69E-11 6256200 5184.8 4533.1 4681 3589.5 4871.4 3548.4 3485.6 3456.5 3334.1 3047.7 TRUE FALSE 4743.805534 4237.994366 4363.266762 3865.963912 4677.361823 3749.307342 3253.081984 3426.280185 3680.691626 3425.272085 1.384942689 1.237272328 1.273845304 1.128658926 1.365544607 1.094601319 0.949729511 1.000294312 1.074569125 1 11.74200288 -6.942921323 5.374509939 1.007763126 1.266273157 0.762248526 0.072131014 0.096695676 5.787318661 0.025499196 0.022244068 1.14E-07 6.942921323 0.258510032 LGPELSPSPT(ph)SPTATSTTPSR ddPTM_A459_MK2206_30min_R2 1 LGPELSPSPTSPTATSTTPSR 21 0 M0QY76;P26651 M0QY76 ZFP36 Tristetraprolin 1 LGPELSPS(0.002)PT(0.494)S(0.494)PT(0.008)AT(0.001)STTPSR 150.61 4.07E-06 8307600 43932 54799 43633 54553 42783 46501 45133 35454 28047 40902 TRUE FALSE 47295.4677 52077.76135 45087.70244 50095.84539 41103.12445 48270.62814 39206.98289 40087.95953 30486.47736 39567.37109 1.195314887 1.316179466 1.139517264 1.266089811 1.038813632 1.219960458 0.990891783 1.013157014 0.770495399 1 15.27202359 -7.36805786 1.012705051 0.892706227 1.217757821 0.644886681 0.092486517 0.323953153 0.631276297 0.066862127 0.034969501 4.28E-08 7.36805786 0.325051593 LGPELSPSPTSPTAT(ph)STTPSR ddPTM_A459_MK2206_30min_R1 1 LGPELSPSPTSPTATSTTPSR 21 0 M0QY76;P26651 M0QY76 ZFP36 Tristetraprolin 1 LGPELSPS(0.107)PT(0.153)S(0.109)PT(0.172)AT(0.353)S(0.099)T(0.004)T(0.001)PS(0.001)R 168.62 6.60E-10 7692800 882.43 742.36 587.84 498.97 716.48 696.3 547.88 618.44 505.2 496.62 TRUE FALSE 807.3746947 694.0322291 547.9390586 537.4007559 687.9410844 735.7239043 511.3319249 613.0330443 557.7173479 558.1450349 1.446532074 1.243462157 0.981714473 0.962833533 1.232548964 1.318159006 0.916127338 1.098340048 0.999233735 1 9.124496247 -4.946999181 3.250939515 1.073991888 1.446233576 0.501821527 0.119914679 0.236508057 4.693987449 0.032601643 0.181525573 1.13E-05 4.946999181 0.372241688 LGPGRPLPTFPTSECT(ph)SDVEPDTR ddPTM_A459_MK2206_30min_R1 2 LGPGRPLPTFPTSECTSDVEPDTR 24 1 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 LGPGRPLPTFPT(0.008)S(0.034)ECT(0.479)S(0.479)DVEPDTR;LGPGRPLPTFPT(0.013)S(0.013)ECT(0.487)S(0.487)DVEPDTR 80.355 0.00034979 89686000 3158.36 3500.1 3432.5 3251.84 3305 2796.6 3164.3 3212.4 3180.21 3029.19 TRUE FALSE 2889.724897 3272.242854 3199.511463 3502.29728 3173.354852 2954.941075 2953.215321 3184.314325 3510.80421 3404.468926 0.848803428 0.961161028 0.939797523 1.028735276 0.9321145 0.867959479 0.86745257 0.935333644 1.03123403 1 11.73321405 -8.210744009 6.059879925 1.015512915 0.924342 0.354156458 0.050241122 0.235313681 20.63195536 0.038643664 0.013868455 6.16E-09 8.210744009 -0.091170915 LGPGRPLPTFPTSECT(ph)SDVEPDTR ddPTM_A459_MK2206_30min_R2 3 LGPGRPLPTFPTSECTSDVEPDTR 24 1 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 LGPGRPLPTFPT(0.006)S(0.03)ECT(0.481)S(0.481)DVEPDTR;LGPGRPLPTFPT(0.006)S(0.037)ECT(0.479)S(0.479)DVEPDTR;LGPGRPLPTFPT(0.006)S(0.021)ECT(0.486)S(0.486)DVEPDTR 86.439 0.00013294 75547600 68418 90445 77534 87817 76893 70633 87024 72863 60114.4 84941 TRUE FALSE 73656.13468 85953.63282 80118.94486 80642.07019 73873.79446 73320.98831 75597.64427 82386.44428 65343.04185 82169.38213 0.896393922 1.046054267 0.975046213 0.981412639 0.899042838 0.892315196 0.920022061 1.002641643 0.795223722 1 16.3263133 -6.251449607 23.46478657 0.917135764 0.979844411 0.154434158 0.064315815 519.1542526 1219427.358 0.018086593 0.023028675 5.60E-07 6.251449607 0.062708648 LGPGRPLPTFPTSECTS(ph)DVEPDTR ddPTM_A459_MK2206_30min_R1 1 LGPGRPLPTFPTSECTSDVEPDTR 24 1 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 LGPGRPLPTFPT(0.005)S(0.005)ECT(0.247)S(0.743)DVEPDTR 90.758 2.79E-05 63172000 1328.3 1317.1 1264.3 1136.4 1251.2 1104.3 1394.1 1057.8 884.69 1085.5 TRUE FALSE 1215.32111 1231.356551 1178.482839 1223.925725 1201.362055 1166.824512 1301.102133 1048.551766 976.6566914 1219.979935 0.996181228 1.009325248 0.965985427 1.003234307 0.984739191 0.956429264 1.066494698 0.859482796 0.800551438 1 10.2526417 -7.77955395 24.99972533 0.872512765 0.994880061 0.460668514 0.05424595 192.3168079 265410.5586 0.027674456 0.013335934 1.66E-08 7.77955395 0.122367296 LGQGVLVQVS(ph)PSLVK ddPTM_A459_MK2206_30min_R2 1 LGQGVLVQVSPSLVK 15 0 Q13868-3;Q13868 Q13868-3 EXOSC2 Exosome complex component RRP4 1 LGQGVLVQVS(0.863)PS(0.137)LVK 99.796 0.0080036 3772800 14890 17709 16052 21697 26691 20600 22875 17918 20200 18116 TRUE FALSE 16029.98985 16829.59681 16587.16567 19924.28569 25642.97723 21383.94744 19871.48502 20259.94412 21956.95949 17524.8764 0.914699167 0.960326134 0.946492591 1.136914477 1.463232986 1.220205321 1.133901579 1.156067732 1.252902388 1 14.09711665 -5.840272689 4.186660453 1.216055075 0.940927771 0.530763826 0.110330763 0.162882427 5.403377997 0.03205303 0.050170169 1.44E-06 5.840272689 -0.275127304 LGQGVLVQVSPS(ph)LVK ddPTM_A459_MK2206_30min_R2 1 LGQGVLVQVSPSLVK 15 0 Q13868-3;Q13868 Q13868-3 EXOSC2 Exosome complex component RRP4 1 LGQGVLVQVS(0.009)PS(0.991)LVK 108.66 0.0039389 2411600 13287 16199 18907 20135 16028 17980 14285 12447 14094 15913 TRUE FALSE 14304.26294 15394.58122 19537.34994 18489.90609 15398.66019 18664.2415 12409.36234 14073.86564 15319.87064 15393.76011 0.929224753 1.00005334 1.26917334 1.201129935 1.000318316 1.212455005 0.806129383 0.914257825 0.995200038 1 13.91005805 -7.259908475 24.99917907 0.921751632 1.104897226 0.363540058 0.112048213 155.7564468 2543481.705 0.046413566 0.034023358 5.50E-08 7.259908475 0.183145594 LGQSDPAPLQHQMDIYQK ddPTM_A459_MK2206_30min_R2 1 LGQSDPAPLQHQMDIYQK 18 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 0 67.645 0.040875 6087800 37108 45501 37197 48278 41837 40105 44994 37782 34302 38269 FALSE TRUE 39949.01701 43241.4865 38437.12941 44333.53297 40194.26917 41631.22388 39086.23375 42720.23713 37285.52596 37020.28566 1.079111527 1.168048429 1.038272091 1.197547025 1.085736332 1.124551665 1.055805839 1.153968327 1.007164728 1 15.17602841 -8.277534328 23.62903039 1.003582268 1.112636167 0.456414454 0.047711185 374.2037931 549358.6222 0.041263973 0.010812698 5.28E-09 8.277534328 0.1090539 LGRGS(ph)VSDCSDGTSELEEPLGEDPR ddPTM_A459_MK2206_30min_R1 2 LGRGSVSDCSDGTSELEEPLGEDPR 25 1 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 LGRGS(0.905)VS(0.06)DCS(0.027)DGT(0.005)S(0.002)ELEEPLGEDPR;LGRGS(0.868)VS(0.127)DCS(0.003)DGT(0.002)SELEEPLGEDPR 105.69 1.75E-07 15516300 1354.77 1417.75 1573.29 1315.85 1638.48 1192.97 1264.43 963.92 853.68 420.66 TRUE FALSE 1239.539697 1325.454217 1466.499458 1417.196995 1573.215872 1260.51493 1180.082182 955.4925491 942.4230909 472.7745366 2.621841071 2.803565156 3.10190026 2.997617014 3.327623952 2.66620732 2.496078131 2.021032173 1.993388006 1 8.885008525 -8.224210679 0.760261479 1.046790509 2.977670771 0.886499801 0.217435841 0.199126855 0.250491359 0.221153076 0.089038931 5.97E-09 8.224210679 1.930880263 LGRGS(ph)VSDCSDGTSELEEPLGEDPR ddPTM_A459_MK2206_30min_R2 1 LGRGSVSDCSDGTSELEEPLGEDPR 25 1 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 LGRGS(0.631)VS(0.348)DCS(0.014)DGT(0.004)S(0.003)ELEEPLGEDPR 56.247 0.0066004 6420400 6212.7 8882.3 7929.3 11435 9531.2 8493.5 7685.9 7348.4 7889.6 9465.2 TRUE FALSE 6688.349089 8441.217898 8193.658904 10500.72392 9156.957198 8816.726094 6676.732098 8308.861111 8575.823147 9156.351299 0.730460078 0.921897557 0.894860697 1.146824054 1.000066172 0.962908238 0.729191343 0.907442369 0.936598309 1 13.1605571 -4.673305476 2.535571697 0.944886308 0.640189515 0.298483495 0.098893603 1.188865121 7.299031028 0.027990109 0.883024341 2.12E-05 4.673305476 -0.304696792 LGS(ph)ALLIR ddPTM_A459_MK2206_30min_R1 3 LGSALLIR 8 0 Q14993 Q14993 COL19A1 Collagen alpha-1(XIX) chain 1 LGS(1)ALLIR;LGS(1)ALLIR;LGS(1)ALLIR 111.46 0.011591 61278530 7589.5 6679.32 6801.4 5081.76 8601.76 8052.13 7567.11 6589.47 6706.82 6521.92 TRUE FALSE 6943.973171 6244.495054 6339.739918 5473.158036 8259.133685 8508.034642 7062.321899 6531.858959 7404.01794 7329.904688 0.947348358 0.851920362 0.864914373 0.746688841 1.126772317 1.160729232 0.96349437 0.891124679 1.01011108 1 12.83957872 -6.262189883 24.99996321 1.023602164 0.853532183 0.499377566 0.084675477 66.18503758 2204681.557 0.028437825 0.034189793 5.47E-07 6.262189883 -0.170069982 LGS(ph)ALLIR ddPTM_A459_MK2206_30min_R2 3 LGSALLIR 8 0 Q14993 Q14993 COL19A1 Collagen alpha-1(XIX) chain 1 LGS(1)ALLIR;LGS(1)ALLIR;LGS(1)ALLIR 119.75 0.0077255 40889000 48387.7 56445.3 52691 50110.3 51352.7 50894 53397.6 45856.1 40180.7 44437.2 TRUE FALSE 52092.29952 53642.30848 54447.69164 46016.1282 49336.33497 52830.80683 46386.43098 51849.64972 43675.54466 42987.2178 1.211809049 1.247866487 1.266601898 1.070460722 1.147697792 1.228988744 1.079074975 1.206164352 1.016012361 1 15.39162012 -1.522878763 0.031784797 0.352473378 2.33946424 0.512514737 0.065548653 1002.017462 2.448554472 47.54465142 121.2315732 0.029999999 1.522878763 1.986990862 LGS(ph)DFGSSR ddPTM_A459_MK2206_30min_R2 2 LGSDFGSSR 9 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 LGS(1)DFGSSR;LGS(0.999)DFGS(0.001)SR 102.95 0.01567 7111700 23960 16559.8 16540.7 16583.6 15213.7 13882.3 21042.9 13789.8 13173.5 16796.1 TRUE FALSE 25794.39602 15737.46441 17092.15868 15228.66683 14616.3337 14410.60065 18279.94195 15592.17421 14319.30722 16248.04463 1.587538477 0.968575897 1.051951731 0.937261509 0.899574935 0.886912917 1.125054883 0.959633886 0.881294183 1 13.98797849 -4.761438611 15.58593452 0.968466694 1.587656213 0.868072907 0.072478882 0.015876896 1141.05224 0.018554549 0.103386437 1.73E-05 4.761438611 0.619189518 LGS(ph)FGSITR ddPTM_A459_MK2206_30min_R2 2 LGSFGSITR 9 0 Q14315-2;Q14315 Q14315-2 FLNC Filamin-C 1 LGS(0.997)FGS(0.003)ITR;LGS(0.998)FGS(0.002)ITR 83.883 0.037677 8168900 21702 19569.2 19552 19954.2 22787 17913.9 29811 24188.1 23574 35259 TRUE FALSE 23363.52181 18597.42198 20203.85392 18323.87803 21892.26788 18595.62602 25896.77989 27349.56772 25624.42391 34108.50172 0.684976491 0.545243005 0.592340704 0.537223188 0.641841968 0.545190351 0.759247067 0.801840197 0.751262079 1 15.05784376 -8.214489656 0.613185724 0.990046574 0.57700057 0.799297098 0.062420977 0.305366994 0.268086651 0.061107926 0.028755833 6.10E-09 8.214489656 -0.413046004 LGS(ph)LSAR ddPTM_A459_MK2206_30min_R1 4 LGSLSAR 7 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2;H0Y4T4;Q00G26 H0Y2V6 CEP170;PLIN5 Centrosomal protein of 170 kDa;Perilipin-5 1 LGS(0.986)LS(0.014)AR;LGS(0.997)LS(0.003)AR;LGS(0.999)LS(0.001)AR;LGS(0.986)LS(0.014)AR 122.19 0.0081538 116808000 18116.2 18015.1 17949.4 14016.5 13152.7 10099.5 12775.2 13663.2 13836.7 13005.1 TRUE FALSE 16575.32206 16842.31372 16731.04474 15096.05326 12628.80011 10671.32496 11922.98972 13543.74408 15275.07448 14616.26997 1.134032287 1.15229903 1.144686351 1.032825289 0.864023457 0.73009906 0.815734092 0.926621095 1.045073368 1 13.83528757 -6.038122053 2.967350918 0.88144879 1.143501839 0.632155822 0.084364158 0.173058528 3.056332092 0.028159566 0.040593175 9.16E-07 6.038122053 0.262053049 LGS(ph)LSAR ddPTM_A459_MK2206_30min_R2 5 LGSLSAR 7 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2;H0Y4T4;Q00G26 H0Y2V6 CEP170;PLIN5 Centrosomal protein of 170 kDa;Perilipin-5 1 LGS(0.998)LS(0.002)AR;LGS(0.986)LS(0.014)AR;LGS(0.997)LS(0.003)AR;LGS(0.998)LS(0.002)AR;LGS(0.998)LS(0.002)AR 122.19 0.0081538 117468800 275738 280268 290015 234389 209799 172026 198692 148430 144784 194542 TRUE FALSE 296848.7133 266350.2987 299683.9554 215238.6689 201561.2371 178572.57 172603.5017 167830.3106 157377.0506 188194.1105 1.577353896 1.415295612 1.592419415 1.143705658 1.0710284 0.94887438 0.917156766 0.891793639 0.836248543 1 17.52186195 -6.045303044 1.456084207 0.912947192 1.537525192 0.915232281 0.078996175 0.10174789 0.435540161 0.026855188 0.045355913 9.01E-07 6.045303044 0.624577999 LGS(ph)LSER ddPTM_A459_MK2206_30min_R2 2 LGSLSER 7 0 O60664-3;O60664;O60664-4;O60664-2 O60664-3 PLIN3 Perilipin-3 1 LGS(1)LSER;LGS(0.998)LS(0.002)ER 98.582 0.021764 9139600 45172 38914 41329 33892 37527 31718 58955 40345 50982 44696 TRUE FALSE 48630.40305 36981.58735 42706.88823 31122.91518 36053.50142 32925.05072 51214.13768 45618.23003 55416.32221 43237.57318 1.124725545 0.855311356 0.987726301 0.719811796 0.833846555 0.761491645 1.184482243 1.055059909 1.281670504 1 15.39999793 -7.270175391 24.85923379 1.134891503 0.874792526 0.47885643 0.127555831 518.6510346 1475869.147 0.052276347 0.035859002 5.37E-08 7.270175391 -0.260098977 LGS(ph)PAPQGCYAEALNGAAR ddPTM_A459_MK2206_30min_R1 2 LGSPAPQGCYAEALNGAAR 19 0 A0A2U3U043 A0A2U3U043 1 LGS(1)PAPQGCYAEALNGAAR;LGS(0.999)PAPQGCY(0.001)AEALNGAAR 104.78 0.00089107 10603700 3288.24 3284.88 3744.8 3140.58 2599.62 3069.6 3030.4 2936.84 3311.1 3274.8 TRUE FALSE 3008.557921 3071.033715 3490.61341 3382.468016 2496.071631 3243.398099 2828.247545 2911.163518 3655.300694 3680.506947 0.817430306 0.834405086 0.948405603 0.919022315 0.678186909 0.881236782 0.76843967 0.790968081 0.993151418 1 11.84568878 -8.271262091 24.10281063 0.996575787 0.831466021 0.455688708 0.072906847 444.3066925 1090212.942 0.06929592 0.018852884 5.35E-09 8.271262091 -0.165109767 LGS(ph)PAPQGCYAEALNGAAR ddPTM_A459_MK2206_30min_R2 2 LGSPAPQGCYAEALNGAAR 19 0 A0A2U3U043 A0A2U3U043 1 LGS(1)PAPQGCYAEALNGAAR;LGS(0.634)PAPQGCY(0.366)AEALNGAAR 102.84 0.0010539 14807700 21546.5 21936.5 19754.1 21337.2 20958.5 18617.8 24121.7 16454 16644.1 24743.9 TRUE FALSE 23196.11661 20847.16531 20412.69183 19593.88251 20135.56398 19326.31343 20954.49181 18604.5943 18091.77373 23936.50857 0.969068506 0.870935928 0.852784849 0.818577298 0.841207226 0.807399014 0.875419728 0.777247619 0.755823418 1 14.54692511 -4.299568077 1.211587412 0.83046356 1.228805595 0.260014739 0.063413441 5.083261096 2.875155018 0.017776613 3.380709087 5.02E-05 4.299568077 0.398342035 LGS(ph)PGAPQQEDAMDDKELIEYFK ddPTM_A459_MK2206_30min_R2 1 LGSPGAPQQEDAMDDKELIEYFK 23 1 H0YGG4 H0YGG4 EIF2B1 1 LGS(1)PGAPQQEDAMDDKELIEYFK 61.222 0.0052655 4047400 9868.6 9325.8 11596 11918 12077 6874.1 15675 11346 14023 13758 TRUE FALSE 10624.1476 8862.694333 11982.60485 10944.26128 11602.7963 7135.698692 13616.85367 12828.96116 15242.69519 13309.07759 0.798263256 0.665913492 0.900333233 0.822315537 0.871795676 0.536152761 1.023125275 0.963925642 1.145285621 1 13.70012297 -7.402851167 12.27380508 1.031472282 0.774778375 0.59735018 0.107372886 0.449216418 43.59567167 0.044241485 0.029817042 3.96E-08 7.402851167 -0.256693908 LGS(ph)PLAVDEALR ddPTM_A459_MK2206_30min_R1 4 LGSPLAVDEALR 12 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LGS(1)PLAVDEALR;LGS(1)PLAVDEALR;LGS(1)PLAVDEALR;LGS(1)PLAVDEALR 167.22 0.00043822 41737000 7533.5 7768.2 8698.3 6688.86 5471.93 5596.83 6241.7 5875.74 7338.95 8125.3 TRUE FALSE 6892.736265 7262.488768 8107.883631 7204.037156 5253.971441 5913.717678 5825.327582 5824.369025 8101.860115 9131.923507 0.754795664 0.795285765 0.887861536 0.788884965 0.575341158 0.647587299 0.637908057 0.637803089 0.887201925 1 13.15670306 -8.476949729 4.39749798 0.998933888 0.717749916 0.527661432 0.08929033 0.163224417 7.020352767 0.099192687 0.025917296 3.33E-09 8.476949729 -0.281183972 LGS(ph)PLAVDEALR ddPTM_A459_MK2206_30min_R2 3 LGSPLAVDEALR 12 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LGS(1)PLAVDEALR;LGS(1)PLAVDEALR;LGS(1)PLAVDEALR 197.38 0.00014286 19796100 66811 62336 58105 53821 61835 39813.1 70474 48830.6 42478.8 61693 TRUE FALSE 71926.10153 59240.48489 60042.1917 49423.65214 59407.0472 41328.21542 61220.67915 55212.92708 46173.52924 59679.96246 1.205196829 0.992636095 1.006069529 0.828144826 0.99542702 0.692497343 1.025816315 0.925150164 0.773685628 1 15.86495901 -3.839414941 0.866718344 0.890174178 2.418467424 0.445705866 0.103417866 8.745289306 1.516649794 0.033841787 18.70522761 0.000144739 3.839414941 1.528293246 LGS(ph)PLAVDEALRR ddPTM_A459_MK2206_30min_R1 3 LGSPLAVDEALRR 13 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LGS(1)PLAVDEALRR;LGS(1)PLAVDEALRR;LGS(1)PLAVDEALRR 152.11 0.00022975 36366600 6535 7551.1 8266.1 7031.3 6115.4 5014.14 5628.56 6575.4 6205.7 4725.41 TRUE FALSE 5979.163933 7059.522018 7705.020163 7572.851944 5871.810668 5298.036274 5253.089032 6517.911971 6850.804722 5310.829466 1.125843707 1.329269197 1.45081295 1.425926401 1.105629677 0.997591112 0.989127794 1.227287002 1.289968877 1 12.37472149 -6.275550912 23.86864856 1.102140933 1.341117057 0.459504164 0.122799536 419.1616452 708979.9812 0.04116956 0.046942063 5.30E-07 6.275550912 0.238976124 LGS(ph)PLAVDEALRR ddPTM_A459_MK2206_30min_R2 2 LGSPLAVDEALRR 13 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LGS(1)PLAVDEALRR;LGS(1)PLAVDEALRR 123.76 0.0012276 16404900 56728 78171 61031 67496 77544 59543 64213 54669 50517 50053 TRUE FALSE 61071.1393 74289.14181 63065.74308 61981.36089 74499.23293 61808.95059 55781.75597 61814.42601 54910.87735 48419.77471 1.261285077 1.534272769 1.302479069 1.280083628 1.538611722 1.276522887 1.15204493 1.276635969 1.134058919 1 15.56330875 -8.059871873 0.574633051 1.003689078 1.390380384 0.566126778 0.10379159 0.573396709 0.438925075 0.104174673 0.054556212 8.71E-09 8.059871873 0.386691307 LGS(ph)PVDNLEDMDRDDLTDDSVFTR ddPTM_A459_MK2206_30min_R1 3 LGSPVDNLEDMDRDDLTDDSVFTR 24 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(0.987)PVDNLEDMDRDDLT(0.011)DDS(0.002)VFTR 82.169 0.00010474 20790500 933.4 855 1043.68 784.65 694.02 742.93 701.76 773.07 858.28 562.43 TRUE FALSE 854.0094285 799.3393446 972.8379095 845.083879 666.3757138 784.9940546 654.9468708 766.3111305 947.5012774 632.1080745 1.351049706 1.264561199 1.539037308 1.336929416 1.054211678 1.241866836 1.036131157 1.212310302 1.498954555 1 9.304027434 -6.066614568 8.226615247 1.18186427 1.383539458 0.30936993 0.146658817 0.432632701 49.6578326 0.043199062 0.056042648 8.58E-07 6.066614568 0.201675187 LGS(ph)SGLGSASSIQAAVR ddPTM_A459_MK2206_30min_R1 1 LGSSGLGSASSIQAAVR 17 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 LGS(0.498)S(0.498)GLGS(0.001)ASS(0.002)IQAAVR 114.58 0.0016982 5485600 1708.2 1545.6 1912.6 1550.4 1744.3 1603.2 1400.6 1790.4 1401.1 1362.8 TRUE FALSE 1562.90862 1444.981159 1782.778041 1669.812077 1674.820837 1693.971799 1307.16853 1774.746722 1546.749359 1531.633953 1.020419153 0.943424607 1.163971351 1.090216154 1.093486361 1.105989976 0.853447083 1.158727722 1.009868811 1 10.58085583 LGS(ph)VDSFER ddPTM_A459_MK2206_30min_R1 4 LGSVDSFER 9 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 LGS(0.965)VDS(0.035)FER;LGS(0.623)VDS(0.377)FER;LGS(0.669)VDS(0.331)FER;LGS(0.795)VDS(0.205)FER 128.88 0.0042175 91254200 14896.4 18441.3 18050.1 13764 10752.7 8898.1 13119.7 12870.8 15806.2 16571.2 TRUE FALSE 13629.38296 17240.76802 16824.9095 14824.10566 10324.39719 9401.902732 12244.50875 12758.27195 17449.31105 18624.16536 0.731811745 0.925720304 0.903391329 0.795960806 0.554354893 0.504822769 0.657452751 0.685038589 0.936917747 1 14.18488815 -6.01004794 21.82632836 0.691517699 0.858987027 0.110031628 0.152594944 149.2060278 324116.7711 0.044484212 0.061669097 9.77E-07 6.01004794 0.167469328 LGS(ph)VDSFER ddPTM_A459_MK2206_30min_R2 4 LGSVDSFER 9 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 LGS(0.658)VDS(0.342)FER;LGS(0.997)VDS(0.003)FER;LGS(0.632)VDS(0.368)FER;LGS(0.961)VDS(0.039)FER 128.81 0.0042342 63650100 118041 110786 112073 92858 88587 76052 118889 91783 80456 118806 TRUE FALSE 127078.3097 105284.5283 115809.4579 85271.20436 85108.62927 78946.21215 103278.7315 103779.3532 87453.91745 114929.3699 1.105707878 0.916080271 1.007657642 0.741944417 0.740529852 0.686910684 0.89862784 0.902983748 0.760936195 1 16.810388 -5.750103863 24.99572547 0.809368765 1.00044184 0.435913228 0.098968505 207.3550595 457230.3507 0.027096016 0.046403565 1.78E-06 5.750103863 0.191073075 LGS(ph)YSGPTSVSR ddPTM_A459_MK2206_30min_R1 2 LGSYSGPTSVSR 12 0 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 "Pantothenate kinase 2, mitochondrial" 1 LGS(0.912)YS(0.088)GPTSVSR;LGS(0.953)YS(0.046)GPTSVSR 184.34 0.00010441 152887000 4191.8 4680.6 4742.2 4014 3305.7 2845.72 3812.4 3789.2 4008.5 3790.4 TRUE FALSE 3835.265398 4375.892089 4420.312677 4323.158976 3174.026969 3006.842207 3558.081752 3756.071424 4425.19792 4259.983368 0.900300557 1.027208726 1.037636135 1.014830013 0.745079662 0.70583426 0.835233719 0.881710349 1.03878291 1 12.05663208 -6.235356067 24.39168709 0.852135045 1.000340827 0.265552938 0.101517203 712.5013818 666291.6734 0.031687763 0.040893412 5.82E-07 6.235356067 0.148205781 LGS(ph)YSGPTSVSR ddPTM_A459_MK2206_30min_R2 2 LGSYSGPTSVSR 12 0 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 "Pantothenate kinase 2, mitochondrial" 1 LGS(0.988)YS(0.012)GPTSVSR;LGS(0.591)Y(0.275)S(0.134)GPTSVSR 188.15 0.00012144 124526000 83029.8 94846 87164 74531 87205 61159.8 88602 60238.9 67615.5 87743 TRUE FALSE 89386.62533 90136.08556 90070.00426 68441.57889 83780.89353 63487.27905 76968.45097 68112.33106 73496.57397 84879.9531 1.05309466 1.061924309 1.061145783 0.806333844 0.9870516 0.747965529 0.906791865 0.802454862 0.865888485 1 16.37313624 -5.750649585 24.99777337 0.866405102 1.059041936 0.56142953 0.074705269 140.2742833 324984.2 0.018883822 0.032292969 1.78E-06 5.750649585 0.192636834 LGSPDTVS(ph)PR ddPTM_A459_MK2206_30min_R2 1 LGSPDTVSPR 10 0 H0Y9Y2 H0Y9Y2 BOD1L1 1 LGSPDT(0.001)VS(0.999)PR 80.737 0.046835 5418800 30419 38305 29062 39032 39565 48693 40198 31360 33059 32875 TRUE FALSE 32747.90203 36402.8294 30030.91257 35842.96074 38011.4793 50546.04624 34919.95431 35458.85967 35934.41206 31802.29144 1.029734039 1.144660581 0.944300276 1.127055917 1.195243411 1.589383782 1.098032649 1.114978137 1.129931537 1 14.9568431 -6.054568113 4.117243389 1.2076399 1.047770198 0.147802053 0.153825379 0.407909696 14.16625769 0.047801977 0.065425381 8.82E-07 6.054568113 -0.159869702 LGSQHS(ph)PGR ddPTM_A459_MK2206_30min_R1 2 LGSQHSPGR 9 0 A0A0A0MRT6;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0;B6VEX4;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7 A0A0A0MRT6 ABI1 Abl interactor 1 1 LGS(0.005)QHS(0.995)PGR;LGS(0.008)QHS(0.992)PGR 75.788 0.038493 6167300 10270.7 4342 3947 3708.5 4689.3 6262.1 10498.8 10115.7 509.17 3223 TRUE FALSE 9397.123031 4059.335011 3679.088637 3994.129313 4502.515251 6616.65469 9798.444208 10027.2595 562.1000436 3622.289572 2.594249533 1.120654473 1.015680432 1.102653234 1.243002571 1.826649846 2.705041663 2.768210355 0.155178108 1 11.82268617 -6.790169884 9.89431158 1.865536592 1.359361596 0.003181003 0.835166038 1.060135737 350.0045571 0.293740972 0.261471563 1.62E-07 6.790169884 -0.506174996 LGSQHS(ph)PGR ddPTM_A459_MK2206_30min_R2 6 LGSQHSPGR 9 0 A0A0A0MRT6;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0;B6VEX4;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7 A0A0A0MRT6 ABI1 Abl interactor 1 1 LGS(0.066)QHS(0.934)PGR;LGS(0.002)QHS(0.998)PGR;LGSQHS(1)PGR;LGS(0.005)QHS(0.995)PGR;LGSQHS(1)PGR;LGS(0.157)QHS(0.843)PGR 114.76 0.0055437 284958400 277816 494545 362389 615984 623041 665589 596914 533121.3 680297.5 431315 TRUE FALSE 299085.8066 469986.6144 374470.8684 565656.1368 598577.2798 690918.4558 518538.4748 602802.0844 739468.5469 417241.2269 0.716817484 1.126414611 0.897492492 1.355705286 1.434607228 1.655920871 1.242778617 1.444732796 1.772280636 1 18.67052219 -5.828956922 4.100579749 1.445614905 0.931449167 0.523843185 0.218748513 0.163601643 5.398734607 0.059973178 0.094721885 1.48E-06 5.828956922 -0.514165738 LGSQPIRAS(ph)NPDLR ddPTM_A459_MK2206_30min_R2 1 LGSQPIRASNPDLR 14 1 Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3;Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5 Q9UKE5-8 TNIK TRAF2 and NCK-interacting protein kinase 1 LGSQPIRAS(1)NPDLR 64.313 0.041398 4617100 23356 32885 30332 31315 33478 36317 34871 32026 28253 30198 TRUE FALSE 25144.15332 31251.97872 31343.25374 28756.46433 32163.48551 37699.06888 30292.39581 36211.90816 30710.39487 29212.64173 0.860728501 1.069810084 1.072934589 0.984384247 1.101012562 1.290505297 1.036961877 1.239597175 1.051270719 1 14.83430521 -3.727491763 0.736257955 1.122328265 2.00E-13 0.345304092 0.094297111 12.59568844 1.613238972 0.035756987 16.7606588 0.000187287 3.727491763 -1.122328265 LGSS(ph)SNLQFK ddPTM_A459_MK2206_30min_R1 2 LGSSSNLQFK 10 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0J9YYG8;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 LGS(0.167)S(0.83)S(0.003)NLQFK;LGS(0.091)S(0.865)S(0.044)NLQFK 145.81 0.0008869 93112000 6003.9 7664.4 6273.9 6100.6 4899.5 4465.6 5300.2 5446.7 5898.3 5070.2 TRUE FALSE 5493.236777 7165.446167 5848.045148 6570.469269 4704.34254 4718.438413 4946.633329 5399.080076 6511.449392 5698.334654 0.964007401 1.257463207 1.026272675 1.153050789 0.825564454 0.828038137 0.868084033 0.947483853 1.142693399 1 12.47632464 -6.251268117 24.81205987 0.923959881 1.106151299 0.3347345 0.113077378 706.1768784 1722666.675 0.033934807 0.043293517 5.61E-07 6.251268117 0.182191417 LGSS(ph)SNLQFK ddPTM_A459_MK2206_30min_R2 1 LGSSSNLQFK 10 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0J9YYG8;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 LGS(0.056)S(0.472)S(0.472)NLQFK 117.95 0.0058645 30306000 123590 133830 126090 94208 83231 78031 114820 99246 71196 101570 TRUE FALSE 133052.1454 127184.1968 130293.7777 86510.90504 79962.93274 81000.52438 99743.99608 112217.793 77388.49939 98255.77922 1.354140657 1.294419502 1.326067318 0.880466327 0.813824219 0.824384327 1.015146354 1.142098652 0.787622876 1 16.58425465 -5.757954047 24.9896636 0.924420056 1.321830303 0.761492747 0.102968366 44.79234077 321152.6435 0.030202149 0.049746719 1.75E-06 5.757954047 0.397410247 LGSSGLGSASS(ph)IQAAVR ddPTM_A459_MK2206_30min_R1 1 LGSSGLGSASSIQAAVR 17 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 LGS(0.004)S(0.053)GLGS(0.193)AS(0.064)S(0.686)IQAAVR 113.14 0.0018486 6060300 864.2 1009.9 1057.5 820.97 766.5 853.77 838.83 1008.5 777.74 693.81 TRUE FALSE 790.6952519 944.1553264 985.7198464 884.2012516 735.9686819 902.1097196 782.8731812 999.6827908 858.5888562 779.7644208 1.01401812 1.210821245 1.26412519 1.133933824 0.943834653 1.156900335 1.003986794 1.282031809 1.101087499 1 9.606894519 -8.547673964 22.58549347 0.999999993 1.128927409 0.112315897 0.10597508 4428.339248 4033684.828 0.103519286 0.026728565 2.83E-09 8.547673964 0.128927416 LGSSGLGSASS(ph)IQAAVR ddPTM_A459_MK2206_30min_R2 1 LGSSGLGSASSIQAAVR 17 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 LGS(0.001)S(0.021)GLGS(0.127)AS(0.052)S(0.8)IQAAVR 145.69 0.00046337 5126700 12530 18341 16454 15294 12933 10401 16676 12190 11098 11027 TRUE FALSE 13489.30643 17430.21261 17002.56815 14044.43128 12425.18544 10796.81734 14486.42117 13783.27485 12063.28398 10667.18989 1.264560448 1.63400228 1.593912578 1.31660085 1.164803998 1.012151977 1.35803537 1.292118636 1.130877401 1 13.38089255 -5.976315119 3.910117018 1.179502759 1.509404317 0.541867882 0.138253219 0.172066683 5.854800797 0.041166556 0.060648665 1.06E-06 5.976315119 0.329901558 LGSTGS(ph)QPNSEAESVPENVPKPPLLPPK ddPTM_A459_MK2206_30min_R2 1 LGSTGSQPNSEAESVPENVPKPPLLPPK 28 1 A0A0J9YVR0;Q8IZ21-3;Q8IZ21;Q8IZ21-2 A0A0J9YVR0;Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 LGS(0.099)T(0.399)GS(0.497)QPNS(0.006)EAESVPENVPKPPLLPPK 110.42 3.16E-10 7350300 81104 72377 67164 63414 47612 34939 53403 41686 32442 40317 TRUE FALSE 87313.3846 68782.86343 69403.21424 58232.87335 45742.51365 36268.62813 46391.12195 47134.50333 35263.74652 39001.45959 2.238720948 1.763597161 1.779502997 1.493094719 1.172841071 0.929930021 1.189471431 1.208531779 0.90416479 1 15.2512405 -5.603246028 0.803080576 1.035580825 2.247269638 0.905659005 0.128030168 0.300575802 0.310524237 0.059098651 0.266533034 2.49E-06 5.603246028 1.211688813 up LGSVDS(ph)FER ddPTM_A459_MK2206_30min_R1 2 LGSVDSFER 9 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 LGS(0.09)VDS(0.91)FER;LGS(0.251)VDS(0.749)FER 148.91 0.0014818 77353400 5129.9 6457.6 5680.9 4972.5 3983.1 3675.5 4847 4025.4 4989.8 5108.7 TRUE FALSE 4693.575067 6037.209066 5295.296336 5355.482812 3824.444693 3883.603634 4523.665474 3990.206352 5508.507566 5741.604325 0.817467523 1.051484694 0.922267721 0.93275024 0.666093391 0.676396947 0.78787482 0.694963659 0.959402156 1 12.4872382 -6.174259006 9.160810815 0.775763244 0.939581237 0.220476934 0.118467895 0.498258699 49.15453035 0.033776627 0.043654529 6.69E-07 6.174259006 0.163817994 LGSVDS(ph)FER ddPTM_A459_MK2206_30min_R2 2 LGSVDSFER 9 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 LGS(0.1)VDS(0.9)FER;LGS(0.49)VDS(0.51)FER 135.55 0.002717 56850900 59631 50749 61967 48460 47148 43236 52736 41846 31238 67240 TRUE FALSE 64196.39521 48228.87846 64032.94885 44500.66298 45296.73262 44881.37628 45811.69985 47315.41588 33955.02477 65045.96431 0.986938942 0.741458428 0.98442616 0.684141798 0.696380369 0.689994787 0.704297343 0.727415088 0.522015857 1 15.98917193 -5.776873638 24.98077785 0.703784273 0.887992905 0.303730662 0.127489241 260.424154 421503.1526 0.033236651 0.04949788 1.67E-06 5.776873638 0.184208632 LGTHGS(ph)PTASSQSSATNMAIHR ddPTM_A459_MK2206_30min_R2 1 LGTHGSPTASSQSSATNMAIHR 22 0 C9JD37;Q14449-2;Q14449 C9JD37 GRB14 Growth factor receptor-bound protein 14 1 LGT(0.104)HGS(0.862)PT(0.034)AS(0.001)SQSSATNMAIHR 70.501 0.002681 3573400 3347.5 6549.2 5506.3 5790.8 8298.3 7731.7 8599.4 5651.1 5530.7 6113.2 TRUE FALSE 3603.787174 6223.976251 5689.877294 5317.673116 7972.467046 8025.935261 7470.28845 6389.718173 6011.750289 5913.726785 0.609393586 1.052462597 0.962147475 0.899208453 1.348129079 1.357170453 1.26321163 1.080489242 1.016575589 1 12.52985188 -4.338100716 0.7925106 1.167862976 4.96E-13 0.496438422 0.151707638 4.353883246 1.286371683 0.061309702 5.28059729 4.59E-05 4.338100716 -1.167862976 LGTLS(ph)PAFSTR ddPTM_A459_MK2206_30min_R2 1 LGTLSPAFSTR 11 0 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 1 LGT(0.001)LS(0.999)PAFSTR 96.334 0.020334 4221100 74945 83273 75075 85538 81083 81688 85307 64817 75595 85621 TRUE FALSE 80682.84682 79137.78391 77577.96303 78549.27178 77899.27401 84796.69408 74106.08843 73288.80445 82170.11646 82827.19378 0.974110593 0.955456539 0.936624308 0.948351238 0.940503601 1.023778426 0.894707222 0.884839883 0.992066889 1 16.33781689 -4.827050021 3.629441761 0.948267326 0.97577061 0.014425674 0.041701289 1.093530828 24.32343767 0.010538853 0.075192467 1.49E-05 4.827050021 0.027503284 LGTS(ph)ESLPCTAEELSR ddPTM_A459_MK2206_30min_R2 1 LGTSESLPCTAEELSR 16 0 Q9BZL6-2;Q9BZL6;Q9BZL6-3 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 LGT(0.001)S(0.996)ES(0.003)LPCTAEELSR 299.56 5.64E-88 17560000 28401 37704 39851 35222 31662 37907 40246 25449 26878 37516 TRUE FALSE 30575.4024 35831.67419 41179.61245 32344.24993 30418.79079 39349.57745 34961.65186 28775.27168 29215.79986 36291.85599 0.842486601 0.98731997 1.134679154 0.891226118 0.838171263 1.084253653 0.963347035 0.792885095 0.805023581 1 15.14735822 -7.739313396 22.20511135 0.84921589 0.967696371 0.148272622 0.103940735 100.7299939 101090.4519 0.049695809 0.028640827 1.82E-08 7.739313396 0.118480481 LGTSES(ph)LPCTAEELSR ddPTM_A459_MK2206_30min_R1 2 LGTSESLPCTAEELSR 16 0 Q9BZL6-2;Q9BZL6;Q9BZL6-3 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 LGTS(0.014)ES(0.952)LPCT(0.034)AEELSR;LGT(0.008)S(0.008)ES(0.983)LPCT(0.001)AEELSR 210.08 4.91E-08 23803000 5627.7 4149.6 4964.8 4881.8 5079.2 3743.7 5498.3 5145.9 5051.8 4896.9 TRUE FALSE 5149.034563 3879.460286 4627.803209 5257.797082 4876.884709 3955.665059 5131.518439 5100.909939 5576.952688 5503.564942 0.935581685 0.70489952 0.840873735 0.955343879 0.886131945 0.718745958 0.932398998 0.926837421 1.013334584 1 12.42615071 -7.759795517 2.043577913 0.996370332 0.842010031 0.389641544 0.079216298 0.360775165 2.954355103 0.056944484 0.023605723 1.74E-08 7.759795517 -0.154360301 LGTSES(ph)LPCTAEELSR ddPTM_A459_MK2206_30min_R2 3 LGTSESLPCTAEELSR 16 0 Q9BZL6-2;Q9BZL6;Q9BZL6-3 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 LGTS(0.001)ES(0.999)LPCTAEELSR;LGTS(0.001)ES(0.987)LPCT(0.012)AEELSR;LGT(0.04)S(0.088)ES(0.857)LPCT(0.015)AEELSR 287.01 1.90E-74 31200100 55357.7 49146 64603 57813 55043 66381 76906 43772 49838 67534 TRUE FALSE 59595.92807 46705.4811 66756.83178 53089.49297 52881.73525 68907.17547 66808.14982 49493.15069 54172.81915 65330.37111 0.912223933 0.714912227 1.021834572 0.812631125 0.809451016 1.054749488 1.022620087 0.757582574 0.8292134 1 15.99546621 LGTSLS(ph)S(ph)GHVLMNGT(ph)LK ddPTM_A459_MK2206_30min_R1 1 LGTSLSSGHVLMNGTLK 17 0 P80108 P80108 GPLD1 Phosphatidylinositol-glycan-specific phospholipase D 3 LGT(0.031)S(0.14)LS(0.832)S(0.998)GHVLMNGT(1)LK 62.648 0.042265 12539000 3337.9 816.86 2207.3 1496.6 6627 9220.9 7082.7 1980.1 1065.4 668.71 TRUE FALSE 3053.994077 763.6822655 2057.474626 1611.868391 6363.032557 9742.979389 6610.226006 1962.788194 1176.152143 751.5548433 4.063567821 1.016136443 2.737624066 2.144711601 8.46649132 12.96376369 8.795400715 2.611636678 1.564958503 1 9.553734576 -3.683152468 21.22848749 4.828573242 5.10612195 0 3.89962233 0 0 0.998986411 0 0.000207419 3.683152468 0.277548708 LGVIEDHSNR ddPTM_A459_MK2206_30min_R1 2 LGVIEDHSNR 10 0 P14625;Q58FF3 P14625 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein 0 ; 185.33 9.93E-05 39233000 21571.7 19857.8 19895 17639.3 22111.6 18049.8 20277.9 19593.2 17791.2 16513.1 FALSE TRUE 19736.91364 18565.05361 18544.58283 18997.88194 21230.84815 19071.76408 18925.19829 19421.89872 19640.65891 18558.8675 1.063476187 1.000333324 0.999230305 1.023655239 1.14397326 1.0276362 1.019738855 1.046502365 1.058289732 1 14.17982106 -6.027252127 24.99908772 1.052269412 1.017694825 0.101325159 0.039515207 1472.822391 1351055.849 0.011785065 0.015258753 9.39E-07 6.027252127 -0.034574587 LGVIEDHSNR ddPTM_A459_MK2206_30min_R2 6 LGVIEDHSNR 10 0 P14625;Q58FF3 P14625 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein 0 ;;;;; 183.72 0.00023509 93686300 570146 702535 628775 711023 665921 705320 683892 519910 613822 599280 FALSE TRUE 613796.8161 667648.1335 649738.0447 652930.1465 639773.5956 732161.4468 594096.1589 587864.0221 667211.128 579725.5427 1.058771386 1.151662441 1.120768358 1.126274588 1.10358014 1.262944951 1.024788655 1.014038504 1.150908626 1 19.14501053 -8.434344315 0.623712573 1.008989288 1.129120096 0.192882284 0.068226932 1.299689902 1.194759257 0.069916289 0.030403903 3.68E-09 8.434344315 0.120130808 LGVSVS(ph)PSR ddPTM_A459_MK2206_30min_R1 6 LGVSVSPSR 9 0 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 LGVS(0.004)VS(0.989)PS(0.007)R;LGVS(0.012)VS(0.988)PSR;LGVS(0.001)VS(0.998)PS(0.001)R;LGVS(0.012)VS(0.987)PSR;LGVS(0.001)VS(0.999)PSR;LGVS(0.001)VS(0.954)PS(0.045)R 178.54 0.0004398 1418023000 28187.3 27141.1 27149.9 22693.9 27572.2 24786.2 26906.1 25283.5 22555.1 19904.5 TRUE FALSE 25789.82212 25374.20946 25307.04043 24441.78811 26473.94089 26189.57322 25111.24316 25062.44903 24899.78336 22370.41973 1.152853743 1.134275072 1.13127249 1.092594078 1.183435144 1.170723372 1.122519982 1.120338792 1.11306733 1 14.44930471 -9.055190164 0.927818851 0.999478102 1.141156927 0.753328702 0.023905955 0.990498635 1.249365013 0.025517238 0.008085793 8.81E-10 9.055190164 0.141678825 LGVSVS(ph)PSR ddPTM_A459_MK2206_30min_R2 6 LGVSVSPSR 9 0 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 LGVS(0.017)VS(0.79)PS(0.193)R;LGVS(0.001)VS(0.999)PSR;LGVS(0.001)VS(0.999)PSR;LGVS(0.013)VS(0.68)PS(0.307)R;LGVS(0.013)VS(0.936)PS(0.051)R;LGVS(0.001)VS(0.732)PS(0.267)R 173.24 0.0004398 1641170000 439561 543220 481552 576146 509199 546820 543578 407293 470593 455338 TRUE FALSE 473214.1281 516244.4847 497606.7033 529073.0288 489205.2887 567629.6183 472205.5556 460527.5935 511524.3285 440480.3584 1.074313801 1.172003416 1.129691016 1.201127403 1.110617714 1.288660453 1.072024091 1.045512211 1.161287487 1 18.74871816 -8.7683319 0.629306501 1.002097068 1.155390072 0.279300529 0.067729888 1.45919571 1.203472722 0.073116906 0.028077879 1.70E-09 8.7683319 0.153293004 LGY(ph)VS(ph)VKLLT(ph)S(ph)FK ddPTM_A459_MK2206_30min_R1 1 LGYVSVKLLTSFK 13 1 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 4 LGY(1)VS(1)VKLLT(1)S(1)FK 94.409 0.025391 0 494.78 373.45 412.69 317.07 501.37 257.83 400.04 340.81 477.17 457.95 TRUE FALSE 452.6963628 349.1383371 384.6777526 341.4907863 481.3993712 272.4281118 373.3540615 337.8303341 526.7735291 514.6843033 0.879561238 0.678354352 0.747405254 0.66349563 0.935329421 0.529311094 0.725404018 0.656383597 1.023488623 1 9.007543974 -8.26836525 24.75538224 1.011744381 0.724167785 0.523935837 0.108580637 385.0822438 1376390.763 0.091994075 0.025848832 5.39E-09 8.26836525 -0.287576596 LGYLVS(ph)PPQQIR ddPTM_A459_MK2206_30min_R1 1 LGYLVSPPQQIR 12 0 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2;H3BSK8 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LGYLVS(1)PPQQIR 86.699 0.029531 36682000 1339.7 1281.8 1546.8 1137.8 1385.3 1305.2 1542.4 1173.8 1229.1 1081.7 TRUE FALSE 1225.75148 1198.354587 1441.807526 1225.433553 1330.120568 1379.099296 1439.50931 1163.53759 1356.869343 1215.709162 1.008260461 0.985724731 1.185980636 1.007998945 1.094110836 1.134399031 1.184090204 0.957085483 1.116113447 1 10.24758241 -3.194264097 20.75655804 1.071407686 1.010683283 0 0.081132417 0 0 0.018192438 0 0.000639346 3.194264097 -0.060724403 LGYLVS(ph)PPQQIR ddPTM_A459_MK2206_30min_R2 1 LGYLVSPPQQIR 12 0 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2;H3BSK8 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LGYLVS(1)PPQQIR 113.69 0.0058489 23476000 65485 69908 49607 60845 62188 60033 82021 55741 45265 47702 TRUE FALSE 70498.58195 66436.47038 51260.87262 55873.76887 59746.18665 62317.59788 71251.54418 63026.54009 49202.06788 46145.48765 1.527745952 1.439717592 1.110853417 1.210817606 1.294735189 1.35045919 1.544063088 1.365822387 1.066237901 1 15.49390196 -8.3173031 4.536776872 1.012884011 1.349779944 0.513769165 0.125792145 0.198516053 8.303266967 0.129960279 0.035107823 4.82E-09 8.3173031 0.336895933 LHAEFAAER ddPTM_A459_MK2206_30min_R2 1 LHAEFAAER 9 0 Q9H773 Q9H773 DCTPP1 dCTP pyrophosphatase 1 0 103.7 0.021083 2987500 13481 16642 12991 14428 12797 14917 15331 15071 13182 14800 FALSE TRUE 14513.11573 15815.58248 13424.11346 13249.18625 12294.52548 15484.67689 13318.02128 17040.83145 14328.54653 14317.07721 1.013692635 1.104665585 0.937629466 0.925411385 0.85873152 1.081552936 0.930219282 1.190245131 1.000801094 1 13.80544938 -7.727428486 24.99992385 1.071642969 0.979373058 0.169419316 0.085533312 295.1480251 216950.4808 0.040653955 0.02346998 1.87E-08 7.727428486 -0.092269911 LHDFGYR ddPTM_A459_MK2206_30min_R1 2 LHDFGYR 7 0 A0A0C4DFS8;P43490 A0A0C4DFS8 NAMPT Nicotinamide phosphoribosyltransferase 0 ; 168.74 4.44E-05 48568000 6053.8 6953.5 6622.3 5964.4 7317.5 5858 6984.1 6316.5 5107.3 5122.5 FALSE TRUE 5538.89252 6500.825886 6172.796727 6423.779121 7026.02848 6189.674898 6518.203432 6261.275506 5638.222112 5757.113973 0.962095339 1.129181377 1.072203322 1.115798498 1.220408092 1.075135029 1.132199825 1.087571922 0.979348705 1 12.49113006 -8.20348456 4.679643601 0.989072087 1.105237149 0.337985477 0.061237456 0.220139155 9.873812956 0.046051392 0.015661216 6.26E-09 8.20348456 0.116165062 LHDFGYR ddPTM_A459_MK2206_30min_R2 3 LHDFGYR 7 0 A0A0C4DFS8;P43490 A0A0C4DFS8 NAMPT Nicotinamide phosphoribosyltransferase 0 ;; 157.99 0.001615 30317200 42245.4 46574.4 43441.3 41263.7 52319.6 42919.6 53615.1 40252 41396.6 44837.2 FALSE TRUE 45479.74031 44261.58302 44889.61126 37892.32371 50265.26962 44552.93545 46575.37297 45513.07461 44997.20144 43374.16584 1.048544437 1.020459579 1.034938895 0.873615042 1.158875765 1.027176767 1.073804466 1.049312966 1.037419408 1 15.40454839 -6.277564524 24.99963818 1.059503103 0.999148005 0.213115458 0.05932142 1329.393843 2061023.683 0.017961157 0.020426376 5.28E-07 6.277564524 -0.060355098 LHDFLAHSSEESEET(ph)SSPPR ddPTM_A459_MK2206_30min_R2 1 LHDFLAHSSEESEETSSPPR 20 0 P46100-4;P46100;P46100-6;A0A096LNL9;A0A096LNW1;A0A087WWG0 P46100-4 ATRX Transcriptional regulator ATRX 1 LHDFLAHSS(0.004)EES(0.057)EET(0.313)S(0.313)S(0.313)PPR 92.913 0.0018038 5451100 23438 26932 26316 30316 29293 30082 33493 23782 25089 32949 TRUE FALSE 25232.4313 25594.59604 27193.36231 27839.08582 28142.80963 31226.79159 29095.32887 26890.38906 27271.19587 31873.87683 0.791633582 0.802996014 0.853155154 0.873413861 0.882942787 0.979698571 0.912826796 0.843649776 0.855597078 1 14.96008688 -5.540626491 1.242657642 0.90758368 0.785765768 0.491370088 0.046133343 0.536642941 1.491556465 0.016161758 0.059276421 2.88E-06 5.540626491 -0.121817912 LHELRIARLRQEER ddPTM_A459_MK2206_30min_R1 1 LHELRIARLRQEER 14 3 Q9BYN8 Q9BYN8 MRPS26 "28S ribosomal protein S26, mitochondrial" 0 77.527 0.021794 35072000 7791.3 9288.2 9599 8226.4 9498.2 7722.6 8457.1 8342.6 6930 6145.7 FALSE TRUE 7128.609021 8683.536492 8947.446624 8859.998753 9119.866581 8159.846938 7892.94229 8269.661528 7650.398299 6907.075714 1.032073386 1.25719434 1.295403003 1.282742382 1.320365804 1.181375053 1.142732846 1.197273907 1.107617553 1 12.75385932 -8.43656111 0.763138178 1.001513056 1.237346352 0.436740916 0.078970141 0.643677218 0.850705061 0.079384049 0.030478356 3.66E-09 8.43656111 0.235833296 LHGELQDR ddPTM_A459_MK2206_30min_R2 2 LHGELQDR 8 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 0 ; 140.35 0.0032972 24121100 39500 47406 35971 57694 43553 53833 50946 42716 42311 39056 FALSE TRUE 42524.15037 45051.88697 37170.25519 52980.21565 41842.89038 55881.65254 44256.729 48299.12787 45991.1343 37781.60592 1.125525222 1.192429117 0.983818826 1.402275376 1.107493696 1.479070335 1.17138295 1.278376784 1.217289027 1 15.2053964 -5.754890802 24.99999486 1.250166178 1.109774908 0.164355762 0.137659446 255.6381102 975916.512 0.034865056 0.058628378 1.76E-06 5.754890802 -0.14039127 LHGS(ph)VPNLSR ddPTM_A459_MK2206_30min_R2 1 LHGSVPNLSR 10 0 J3QLK7;Q9BZF2-2;Q9BZF2 J3QLK7 OSBPL7 Oxysterol-binding protein-related protein 7 1 LHGS(1)VPNLSR 78.705 0.037854 0 8210.2 10901 7329.1 10903 7035 7984.6 10608 7398.7 6900 8512.2 TRUE FALSE 8838.779225 10359.67219 7573.448536 10012.19002 6758.770552 8288.459548 9215.156858 8365.735494 7500.149528 8234.447611 1.073390668 1.258089514 0.919727575 1.215890913 0.820792222 1.006559267 1.119098365 1.015943739 0.910826067 1 13.00745616 -5.262484199 24.99951168 1.007314249 1.16574009 0.256279741 0.111784238 120.6074891 2885866.964 0.027967261 0.064117306 5.46E-06 5.262484199 0.158425841 LHIIEVGT(ph)PPTGNQPFPK ddPTM_A459_MK2206_30min_R2 1 LHIIEVGTPPTGNQPFPK 18 0 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 1 LHIIEVGT(0.999)PPT(0.001)GNQPFPK 74.783 0.021667 5398700 18423 20862 19960 28114 23348 21397 22268 19493 20109 23366 TRUE FALSE 19833.47904 19826.02342 20625.45644 25816.99627 22431.24021 22211.27783 19344.18485 22040.80203 21858.04447 22603.56933 0.877448988 0.877119145 0.912486702 1.14216458 0.992376021 0.98264471 0.855802222 0.975102724 0.967017383 1 14.46426299 -5.537702245 24.99995569 0.984842303 0.881663713 0.335153381 0.064918401 279.7154348 471740.668 0.018936372 0.032813875 2.90E-06 5.537702245 -0.10317859 LHLS(ph)PVGIPGSAR ddPTM_A459_MK2206_30min_R1 1 LHLSPVGIPGSAR 13 0 Q9H7P9;Q9H7P9-3;Q9H7P9-2;C9J7S4;C9JVL3 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 LHLS(0.999)PVGIPGS(0.001)AR 69.379 0.042374 9495400 5415.1 5401.9 5509.3 4258.4 5149.3 4857.8 5442 5230 5567 5456.1 TRUE FALSE 4954.517309 5050.235328 5135.344066 4586.382706 4944.192477 5132.844438 5078.974109 5184.274661 6145.709572 6132.042859 0.807971735 0.823581218 0.837460563 0.747937157 0.806287984 0.837052929 0.828267875 0.845440056 1.002228737 1 12.58215207 -8.207846312 3.128121573 1.008163217 0.813017423 0.901667125 0.024521968 0.075835127 1.380477222 0.022759717 0.006909472 6.20E-09 8.207846312 -0.195145794 LHLS(ph)PVGIPGSAR ddPTM_A459_MK2206_30min_R2 1 LHLSPVGIPGSAR 13 0 Q9H7P9;Q9H7P9-3;Q9H7P9-2;C9J7S4;C9JVL3 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 LHLS(1)PVGIPGSAR 69.069 0.042991 9230100 34378 37381 32455 39140 33875 29087 40547 26332 29157 35125 TRUE FALSE 37010.00611 35524.7139 33537.0335 35942.1368 32544.89729 30193.92617 35223.13019 29773.68281 31693.02316 33978.87413 1.089206369 1.045494143 0.986996608 1.057778921 0.957797989 0.888608788 1.03661852 0.876241005 0.932727289 1 15.05235043 -5.648752582 0.708722795 0.939706142 1.093258464 0.43960635 0.051459982 1.108029147 0.882084152 0.025982731 0.115207477 2.25E-06 5.648752582 0.153552322 LHNGDLCS(ph)PK ddPTM_A459_MK2206_30min_R2 1 LHNGDLCSPK 10 0 Q9ULD2;Q9ULD2-4;Q9ULD2-7;Q9ULD2-3;Q9ULD2-6;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 LHNGDLCS(1)PK 89.189 0.031193 2128800 20065 16169 13448 16696 15384 8749 18110 14166 9700.4 21683 TRUE FALSE 21601.19183 15366.07097 13896.34961 15331.88339 14779.94686 9081.949326 15732.13525 16017.54484 10544.12326 20975.48549 1.029830363 0.73257284 0.662504313 0.730942957 0.704629548 0.432979219 0.750024845 0.763631662 0.502687924 1 14.35641658 -4.756377702 3.310267524 0.679851787 1.089061075 0.320203982 0.145031812 0.39614705 6.508610029 0.03479018 0.43281027 1.75E-05 4.756377702 0.409209288 LHPDGS(ph)PDVAGEK ddPTM_A459_MK2206_30min_R1 4 LHPDGSPDVAGEK 13 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 LHPDGS(1)PDVAGEK;LHPDGS(1)PDVAGEK;LHPDGS(1)PDVAGEK;LHPDGS(1)PDVAGEK 191.01 0.00016816 31014600 12756.1 13259.4 13021.3 10907.9 11622.5 11344.7 11946.5 11267.1 10186.6 9766.8 TRUE FALSE 11671.12671 12396.21065 12137.45044 11748.02835 11159.55121 11987.02711 11149.57078 11168.59293 11245.53352 10976.78492 1.063255479 1.12931161 1.105738203 1.070261323 1.016650257 1.092034434 1.015741027 1.01747397 1.024483362 1 13.42216793 -6.593603438 0.545875037 1.006419301 1.110030386 0.5916266 0.027204672 0.695380452 0.444992423 0.02295591 0.033285466 2.55E-07 6.593603438 0.103611085 LHPDGS(ph)PDVAGEK ddPTM_A459_MK2206_30min_R2 3 LHPDGSPDVAGEK 13 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 LHPDGS(1)PDVAGEK;LHPDGS(1)PDVAGEK;LHPDGS(1)PDVAGEK 165.86 0.00034704 21715900 161137 167439 150351 173470 176476 136162 205274 145881 133601 181715 TRUE FALSE 173473.7726 159124.2227 155363.6273 159296.9461 169546.6655 141343.7403 178321.2772 164948.1476 145221.3735 175785.6544 0.986848291 0.905217341 0.883824268 0.906199921 0.964507975 0.804068687 1.014424515 0.938348172 0.826127558 1 17.42345781 LHPPS(ph)PVPQGVCPAHR ddPTM_A459_MK2206_30min_R1 1 LHPPSPVPQGVCPAHR 16 0 Q96F44-2;Q96F44-3;Q96F44 Q96F44-2 TRIM11 E3 ubiquitin-protein ligase TRIM11 1 LHPPS(1)PVPQGVCPAHR 102.5 0.0025563 4620500 1037.4 927.69 1008.2 1164.3 944.25 730.35 1152.4 824.23 977.13 905.66 TRUE FALSE 949.1636824 867.2972124 939.766193 1253.974588 906.638523 771.7017858 1075.525499 817.023844 1078.70616 1017.859998 0.932509072 0.852079082 0.923276477 1.231971578 0.890730085 0.758161031 1.056653666 0.802687841 1.059778518 1 9.991323424 LHPPS(ph)PVPQGVCPAHR ddPTM_A459_MK2206_30min_R2 3 LHPPSPVPQGVCPAHR 16 0 Q96F44-2;Q96F44-3;Q96F44 Q96F44-2 TRIM11 E3 ubiquitin-protein ligase TRIM11 1 LHPPS(1)PVPQGVCPAHR;LHPPS(1)PVPQGVCPAHR;LHPPS(1)PVPQGVCPAHR 108.23 0.0021037 25243400 115624 107478 103574 109656 84914 89796 110634 87696 69458.4 115502 TRUE FALSE 124476.2623 102140.7988 107027.1055 100696.754 81579.8497 93213.2497 96107.6229 99158.16831 75499.76608 111733.1792 1.114049231 0.914149222 0.957881144 0.901225175 0.730130927 0.834248612 0.860152943 0.887454998 0.675714829 1 16.76969813 -2.539588824 0.645380784 0.83071283 6.267089866 0.451584416 0.088567663 45.2049222 1.214857711 0.036279763 320.6174059 0.002886763 2.539588824 5.436377036 LHQLAMQQSHFPMTHGNTGFSGIES(ph)SSPEVK ddPTM_A459_MK2206_30min_R1 1 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVK 31 0 H3BRU6;F8VZX2;Q15366;Q15366-2;Q15366-6;Q15366-3;Q15366-5;Q15366-4;F8VRH0 H3BRU6;Q15366;Q15366-5 PCBP2 Poly(rC)-binding protein 2 1 LHQLAMQQSHFPMT(0.014)HGNT(0.299)GFS(0.087)GIES(0.426)S(0.087)S(0.087)PEVK 90.836 2.96E-07 29305000 2368.5 1626.6 2492.9 1894.8 2836.5 3098.6 4533.2 4165.7 3172 3295 TRUE FALSE 2167.046638 1520.708044 2323.688894 2040.737824 2723.516199 3274.040054 4230.798499 4129.279724 3501.740751 3703.209476 0.58518068 0.410645969 0.627479733 0.551072749 0.735447513 0.884108791 1.142468047 1.11505432 0.945596185 1 11.85456044 -6.687779348 1.594354908 1.06078604 0.532149823 0.896276586 0.077459179 0.106985482 0.563519712 0.032640697 0.03147286 2.05E-07 6.687779348 -0.528636217 LHQLAMQQSHFPMTHGNTGFSGIESS(ph)SPEVK ddPTM_A459_MK2206_30min_R1 1 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVK 31 0 H3BRU6;F8VZX2;Q15366;Q15366-2;Q15366-6;Q15366-3;Q15366-5;Q15366-4;F8VRH0 H3BRU6;Q15366;Q15366-5 PCBP2 Poly(rC)-binding protein 2 1 LHQLAMQQSHFPMT(0.007)HGNT(0.002)GFS(0.004)GIES(0.172)S(0.489)S(0.326)PEVK 116.64 4.09E-16 34692000 3212.5 2538.4 3006.5 2848.3 3955.8 5193.9 5614 5773.8 4353.1 4491.6 TRUE FALSE 2939.260005 2373.149699 2802.427157 3067.67656 3798.232109 5487.97413 5239.500303 5723.320275 4805.620323 5048.053318 0.582256133 0.470111853 0.555150071 0.60769496 0.752415212 1.087146625 1.037924914 1.133767794 0.951974954 1 12.30151143 -6.520555051 2.139956402 1.054027476 0.540213646 0.936717991 0.059837787 0.067547088 0.621602506 0.021147084 0.022845783 3.02E-07 6.520555051 -0.51381383 LHQLAMQQSHFPMTHGNTGFSGIESSS(ph)PEVK ddPTM_A459_MK2206_30min_R1 1 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVK 31 0 H3BRU6;F8VZX2;Q15366;Q15366-2;Q15366-6;Q15366-3;Q15366-5;Q15366-4;F8VRH0 H3BRU6;Q15366;Q15366-5 PCBP2 Poly(rC)-binding protein 2 1 LHQLAMQQSHFPMT(0.052)HGNT(0.014)GFS(0.184)GIES(0.184)S(0.063)S(0.503)PEVK 83.705 2.79E-06 12608000 2254.6 2028.1 2433.7 2441.8 3224 3403.5 4325.5 4214 3584.8 3167.9 TRUE FALSE 2062.834431 1896.070321 2268.507225 2629.867859 3095.581253 3596.203229 4036.953787 4177.157442 3957.452788 3560.363368 0.579388736 0.532549666 0.637156096 0.738651533 0.869456551 1.010066349 1.13386005 1.17323908 1.111530588 1 11.79780877 -6.363539814 1.04663088 1.125232585 0.553190422 0.953496018 0.049434197 0.095036208 0.220260008 0.022839921 0.031301634 4.33E-07 6.363539814 -0.572042163 LHQLS(ph)GSDQLESTAHSR ddPTM_A459_MK2206_30min_R1 3 LHQLSGSDQLESTAHSR 17 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 LHQLS(0.986)GS(0.014)DQLESTAHSR;LHQLS(0.947)GS(0.007)DQLES(0.045)T(0.001)AHSR;LHQLS(0.61)GS(0.389)DQLESTAHSR 193.36 5.69E-08 58717500 8245.1 5921.63 7691.6 6075.2 9365.8 8522.5 9892.6 8555.2 5973.01 5573.7 TRUE FALSE 7543.810948 5536.130811 7169.515622 6543.112957 8992.740354 9005.036585 9232.682704 8480.402788 6593.925764 6264.212035 1.204271328 0.883771299 1.144519946 1.044522906 1.435574068 1.437537001 1.473877744 1.353786037 1.05263451 1 12.61291733 -6.248598397 24.63766967 1.326271442 1.061396238 0.280649528 0.169517012 716.7268173 1375164.702 0.049623215 0.06363162 5.64E-07 6.248598397 -0.264875204 LHQLS(ph)GSDQLESTAHSR ddPTM_A459_MK2206_30min_R2 4 LHQLSGSDQLESTAHSR 17 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 LHQLS(0.996)GS(0.004)DQLESTAHSR;LHQLS(0.819)GS(0.18)DQLESTAHSR;LHQLS(0.988)GS(0.012)DQLESTAHSR;LHQLS(0.5)GS(0.5)DQLESTAHSR 141.5 0.00033155 82290000 147325 204165 162976 208194 230238 217286 224250 171133 184465 208683 TRUE FALSE 158604.3153 194026.463 168409.5385 191183.8842 221197.6993 225554.971 194805.7056 193500.6707 200509.4323 201873.6908 0.785661146 0.961128031 0.834232226 0.947047054 1.095723263 1.117307412 0.964988082 0.95852347 0.993242019 1 17.62309338 -5.99474699 5.587190832 1.021840054 0.872306325 0.564817097 0.063255554 0.13380644 14.55722718 0.019291225 0.027581858 1.01E-06 5.99474699 -0.149533729 LHQLSGS(ph)DQLESTAHSR ddPTM_A459_MK2206_30min_R2 1 LHQLSGSDQLESTAHSR 17 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 LHQLS(0.044)GS(0.894)DQLES(0.044)T(0.017)AHSR 69.525 0.022543 6171400 7382.4 14570 9934.1 13493 15225 15424 20402 12339 14581 14374 TRUE FALSE 7947.60222 13846.47499 10265.29794 12390.57874 14627.19 16010.97113 17723.19289 13951.74967 15849.22902 13904.97756 0.571565268 0.995792689 0.738246279 0.891089445 1.05193913 1.151456093 1.27459342 1.003363695 1.139824136 1 13.7633138 -6.21472049 2.233116025 1.123186482 0.790008596 0.61154964 0.121692383 0.209698541 2.053125738 0.038961468 0.051693604 6.10E-07 6.21472049 -0.333177886 LHS(ph)PQTHWK ddPTM_A459_MK2206_30min_R2 1 LHSPQTHWK 9 0 Q9H8Y5;B8ZZS4 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 LHS(0.999)PQT(0.001)HWK 91.313 0.018114 6803900 48483 56586 49295 60849 48443 53331 59714 49464 41509 53420 TRUE FALSE 52194.89576 53776.02152 50938.4707 55877.44205 46540.88441 55360.54858 51873.48007 55929.11464 45119.37779 51676.90977 1.010023548 1.040619916 0.985710464 1.08128451 0.900612761 1.071282103 1.003803832 1.082284426 0.873105183 1 15.65723218 -8.26081637 24.9999999 0.936552597 1.020339275 0.25228596 0.058755919 73.86416229 2964344.157 0.042105529 0.013707849 5.49E-09 8.26081637 0.083786677 LHS(ph)SNPNLSTLDFGEEK ddPTM_A459_MK2206_30min_R1 3 LHSSNPNLSTLDFGEEK 17 0 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7;Q9H4L5-2;Q9H4L5-6;Q9H4L5-4;Q9H4L5-8 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 LHS(0.5)S(0.5)NPNLSTLDFGEEK;LHS(0.853)S(0.147)NPNLSTLDFGEEK;LHS(0.862)S(0.138)NPNLSTLDFGEEK 138.66 0.00033629 184624000 18235.4 19512.9 18212.5 15323 16350.3 14829.3 18625.1 16932.3 17416.7 16095.6 TRUE FALSE 16684.38347 18242.60666 16976.28624 16503.18012 15699.03293 15668.92215 17382.65356 16784.26269 19227.22829 18089.64444 0.922316827 1.008455789 0.938453284 0.912299861 0.867846407 0.866181875 0.96091737 0.927838175 1.062885915 1 14.14287643 -8.249432836 23.86447793 1.031442951 0.925569437 0.508955991 0.041609586 312.7029145 621540.7022 0.031226593 0.011587584 5.63E-09 8.249432836 -0.105873515 LHS(ph)SNPNLSTLDFGEEK ddPTM_A459_MK2206_30min_R2 2 LHSSNPNLSTLDFGEEK 17 0 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7;Q9H4L5-2;Q9H4L5-6;Q9H4L5-4;Q9H4L5-8 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 LHS(0.5)S(0.5)NPNLSTLDFGEEK;LHS(0.5)S(0.5)NPNLSTLDFGEEK 104.52 0.0018199 132193000 117135 135830 120796 124087 124502 115029 135851 96714 101811 129642 TRUE FALSE 126102.9457 129084.8797 124823.2784 113948.6952 119613.4259 119406.5092 118013.6005 109354.8519 110666.3367 125411.7922 1.005511073 1.029288215 0.995307349 0.908596339 0.953765382 0.952115484 0.941008804 0.871966264 0.882423693 1 16.93631348 -5.64647744 4.673307817 0.927150503 1.016210162 0.520061958 0.035481052 0.164015239 5.935577312 0.010122417 0.017982909 2.26E-06 5.64647744 0.089059659 LHSS(ph)NPNLSTLDFGEEK ddPTM_A459_MK2206_30min_R1 2 LHSSNPNLSTLDFGEEK 17 0 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7;Q9H4L5-2;Q9H4L5-6;Q9H4L5-4;Q9H4L5-8 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 LHS(0.295)S(0.705)NPNLSTLDFGEEK;LHS(0.043)S(0.957)NPNLSTLDFGEEK 305.64 7.94E-90 42268000 8904.4 8909.2 8581.1 7374 7684.5 7175.1 8046.3 8524 7867.7 7990.6 TRUE FALSE 8147.034021 8329.209461 7998.63884 7941.946758 7378.410093 7581.347961 7509.546008 8449.475567 8685.57557 8980.535854 0.907187962 0.927473549 0.890663872 0.8843511 0.821600204 0.844197728 0.836202442 0.940865412 0.967155603 1 13.13258582 -7.956271917 4.278325257 0.976651554 0.873343692 0.667965742 0.031880415 0.144533034 5.695596499 0.0228502 0.00982685 1.11E-08 7.956271917 -0.103307861 LHSS(ph)NPNLSTLDFGEEK ddPTM_A459_MK2206_30min_R2 2 LHSSNPNLSTLDFGEEK 17 0 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7;Q9H4L5-2;Q9H4L5-6;Q9H4L5-4;Q9H4L5-8 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 LHS(0.015)S(0.985)NPNLSTLDFGEEK;LHS(0.006)S(0.994)NPNLSTLDFGEEK 228.26 2.86E-16 11040400 68065 76399 63407 68359 75428 58767 76787 55516 57786 76547 TRUE FALSE 73276.10873 72605.13675 65520.95773 62773.85103 72466.31772 61003.41936 66704.77466 62772.13181 62812.12183 74049.27766 0.989558724 0.980497569 0.884829127 0.847730768 0.978622885 0.823821937 0.900816008 0.847707551 0.848247597 1 16.17619804 -5.251527028 6.254357358 0.885374749 0.986020825 0.31308948 0.054866356 0.156331395 29.25275801 0.01338393 0.03304349 5.60E-06 5.251527028 0.100646076 LHSSS(ph)LELGPRPLEQENER ddPTM_A459_MK2206_30min_R2 1 LHSSSLELGPRPLEQENER 19 1 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 LHS(0.038)S(0.169)S(0.793)LELGPRPLEQENER 77.506 0.0044336 13240000 2015.1 2488.3 2609.5 5638.4 2829.8 2540.6 6194.7 2764.6 1957.5 4522.7 TRUE FALSE 2169.377605 2364.73464 2696.499428 5177.724684 2718.687833 2637.284313 5381.328449 3125.942712 2127.759812 4375.124669 0.495843609 0.540495373 0.616325164 1.183446204 0.621396655 0.602790666 1.229982882 0.714480832 0.486331241 1 12.09510841 -5.538982292 24.99911298 0.82629648 0.533229543 0.242899227 0.232843282 334.4871013 519255.1372 0.06370843 0.110384625 2.89E-06 5.538982292 -0.293066937 LHSYS(ph)SPSTK ddPTM_A459_MK2206_30min_R1 4 LHSYSSPSTK 10 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LHS(0.001)YS(0.745)S(0.226)PS(0.019)T(0.008)K;LHS(0.002)YS(0.772)S(0.214)PS(0.011)T(0.001)K;LHSYS(0.739)S(0.26)PS(0.001)TK;LHSYS(0.748)S(0.242)PS(0.007)T(0.002)K 174.42 8.42E-05 126573000 30881.2 25761.6 27459 22417.1 30277.4 25477.2 29206.1 26269.4 20819.7 20695.2 TRUE FALSE 28254.59178 24084.51516 25595.15959 24143.66893 29071.38704 26919.69705 27257.81436 26039.72941 22983.98232 23259.07762 1.214776968 1.035488834 1.100437429 1.038032089 1.249894236 1.157384549 1.171921553 1.119551249 0.988172562 1 14.50550626 -8.232615385 5.16916351 0.992571778 1.134519706 0.43392354 0.064907736 0.172882636 13.17814323 0.051308775 0.017110727 5.85E-09 8.232615385 0.141947928 LHSYS(ph)SPSTK ddPTM_A459_MK2206_30min_R2 4 LHSYSSPSTK 10 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LHSYS(0.629)S(0.37)PSTK;LHS(0.005)YS(0.716)S(0.245)PS(0.027)T(0.007)K;LHSYS(0.872)S(0.128)PSTK;LHS(0.001)YS(0.84)S(0.152)PS(0.006)T(0.002)K 158.56 0.00047333 80622000 226047 280828 240853 312554 293578 257052 321236 239886 247163 272428 TRUE FALSE 243353.3321 266882.4899 248882.9188 287017.3384 282050.6526 266834.294 279057.3273 271239.9239 268660.791 263538.6967 0.923406449 1.012688054 0.944388517 1.089089921 1.070243786 1.012505174 1.058885586 1.029222377 1.019435834 1 18.00765529 -5.74915231 24.99903783 1.042041876 0.965413698 0.545127882 0.033240681 174.7639052 355567.9625 0.008823216 0.015139732 1.78E-06 5.74915231 -0.076628178 LHTDDELNWLDHGR ddPTM_A459_MK2206_30min_R1 4 LHTDDELNWLDHGR 14 0 Q9Y490 Q9Y490 TLN1 Talin-1 0 ;;; 226.42 2.42E-13 46695500 8824.82 9179.45 9049.7 7766.81 10087.7 9170.22 9577.1 8381.87 8424.1 8096.53 FALSE TRUE 8074.222718 8581.866137 8435.431578 8365.011052 9685.885548 9689.429932 8938.229133 8308.588194 9299.815341 9099.589262 0.887317272 0.943104781 0.927012345 0.919273476 1.064431071 1.064820582 0.982267317 0.913072882 1.022003859 1 13.15158571 -6.23112324 24.04145208 1.004997396 0.921445736 0.50959701 0.042499078 426.4645572 338196.3352 0.013856904 0.017886122 5.87E-07 6.23112324 -0.083551659 LHTDDELNWLDHGR ddPTM_A459_MK2206_30min_R2 2 LHTDDELNWLDHGR 14 0 Q9Y490 Q9Y490 TLN1 Talin-1 0 ; 177.16 3.95E-05 22616000 26266 26825 28693 32586 27714 29393 32452 22371 24417 29156 FALSE TRUE 28276.94516 25492.90951 29649.6103 29923.61956 26625.80911 30511.57121 28191.01342 25294.96651 26540.74652 28204.64211 1.002563516 0.903855096 1.051231573 1.060946615 0.944022229 1.081792532 0.999516793 0.896836996 0.941006322 1 14.78364501 -7.645714901 8.060746743 0.939513207 1.007181418 0.198266523 0.055296326 0.358657329 23.71920815 0.026352695 0.015134648 2.26E-08 7.645714901 0.067668211 LHVAILER ddPTM_A459_MK2206_30min_R1 1 LHVAILER 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 95.815 0.036144 0 2644.7 2451.6 2922.6 2230.4 2670.6 2566.3 2797.7 2429 2367.2 2146 FALSE TRUE 2419.754377 2292.000394 2724.222055 2402.185794 2564.224347 2711.601688 2611.070538 2407.763509 2613.278911 2411.862681 1.003272034 0.950303022 1.129509601 0.995987795 1.063171783 1.124276979 1.082595024 0.998300412 1.083510654 1 11.23593205 -5.241934345 24.84602996 1.060585316 0.976787521 0.32369583 0.047905705 861.3254459 1097175.471 0.01188227 0.031346129 5.73E-06 5.241934345 -0.083797795 LHVAILER ddPTM_A459_MK2206_30min_R2 1 LHVAILER 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 107.01 0.018947 1552700 7911.7 8997.7 8413.4 12356 12473 10564 12087 8925.7 8479.6 8066.6 FALSE TRUE 8517.425835 8550.887302 8693.898557 11346.47528 11983.24735 10966.02042 10499.96238 10092.31964 9217.14028 7803.387503 1.091503636 1.095791706 1.114118523 1.454044833 1.535646839 1.405289744 1.345564651 1.293325448 1.181171674 1 12.92988483 -5.705716362 9.364472051 1.34260206 1.098970567 0.318058224 0.141336503 0.377511059 59.64403589 0.038801605 0.067157837 1.97E-06 5.705716362 -0.243631493 LHVGNIS(ph)PTCTNK ddPTM_A459_MK2206_30min_R1 2 LHVGNISPTCTNK 13 0 D6R9K7;J3QRR5;E9PB51;Q9BWF3-3;Q9BWF3-4;Q9BWF3-2;Q9BWF3 D6R9K7 RBM4 RNA-binding protein 4 1 LHVGNIS(0.822)PT(0.178)CTNK;LHVGNIS(0.5)PT(0.5)CTNK 137.27 0.00069445 126452000 14067.4 15573.6 15202.8 13510 14093.2 12125 14543.7 13383.4 12323.5 10760.1 TRUE FALSE 12870.89376 14559.75581 14170.87629 14550.54254 13531.838 12811.50702 13573.51631 13266.39034 13604.57193 12093.14242 1.064313419 1.203967943 1.171810915 1.203206084 1.118967885 1.059402641 1.122414327 1.097017622 1.124982362 1 13.56190156 -6.4974194 7.45472414 1.089323155 1.164413092 0.361330584 0.049442699 0.233211447 53.85925677 0.015041291 0.016511255 3.18E-07 6.4974194 0.075089937 LHVGNIS(ph)PTCTNK ddPTM_A459_MK2206_30min_R2 3 LHVGNISPTCTNK 13 0 D6R9K7;J3QRR5;E9PB51;Q9BWF3-3;Q9BWF3-4;Q9BWF3-2;Q9BWF3 D6R9K7 RBM4 RNA-binding protein 4 1 LHVGNIS(0.977)PT(0.023)CTNK;LHVGNIS(0.912)PT(0.087)CT(0.001)NK;LHVGNIS(0.5)PT(0.5)CTNK 196.37 0.00019025 92401600 286483 359474 303692 385108 356273 333869 402164 303367 267021 376621 TRUE FALSE 308416.3587 341623.0439 313816.9397 353643.4445 342283.9319 346574.6187 349359.3837 343018.1085 290246.0039 364331.8876 0.846525844 0.937669898 0.86134909 0.970662894 0.93948387 0.951260734 0.958904218 0.941499002 0.79665276 1 18.47489374 -5.755327266 24.99974309 0.936105761 0.887430443 0.171063727 0.055128198 297.1783357 1215502.637 0.014794091 0.024816374 1.76E-06 5.755327266 -0.048675318 LHVGNIS(ph)PTCTNQELR ddPTM_A459_MK2206_30min_R2 3 LHVGNISPTCTNQELR 16 0 E9PLB0;E9PM61;U3KQD5;Q9BQ04 E9PLB0 RBM4B RNA-binding protein 4B 1 LHVGNIS(0.987)PT(0.013)CTNQELR;LHVGNIS(0.987)PT(0.012)CT(0.001)NQELR;LHVGNIS(0.95)PT(0.044)CT(0.006)NQELR 122.96 0.0014045 28977100 57106.8 60159 60305 82299 73644 65215 68784 63942 53029.7 83662 TRUE FALSE 61478.94052 57171.59154 62315.5386 75574.90844 70752.36653 67696.80252 59752.57818 72299.43895 57642.12745 80932.11579 0.759635899 0.706414147 0.769972933 0.933806162 0.874218669 0.836464015 0.738304906 0.893334349 0.712228105 1 16.30442469 -12.13711035 2.255479952 5.696747114 0.806636846 0.382517524 0.075050414 6286389.695 635338.3271 149688797.9 0.020806809 7.29E-13 12.13711035 -4.890110268 LHVGNISPT(ph)CTNK ddPTM_A459_MK2206_30min_R2 1 LHVGNISPTCTNK 13 0 D6R9K7;J3QRR5;E9PB51;Q9BWF3-3;Q9BWF3-4;Q9BWF3-2;Q9BWF3 D6R9K7 RBM4 RNA-binding protein 4 1 LHVGNIS(0.382)PT(0.618)CTNK 106.87 0.0092364 80664000 155700 197030 171610 184920 175330 168080 212280 156460 126870 169300 TRUE FALSE 167620.5117 187245.7767 177331.3917 169811.4445 168445.6632 174476.4022 184407.381 176909.8592 137904.9233 163775.7549 1.023475739 1.143305838 1.082769497 1.036853377 1.02851404 1.065337188 1.12597485 1.080195657 0.842035034 1 17.32136227 -8.243272397 24.89852203 0.921017523 1.074734453 0.58616083 0.051171805 441.733143 605414.0409 0.033811091 0.012720501 5.71E-09 8.243272397 0.153716931 LHYTPPLQS(ph)PIIDNDPLLGQSPWR ddPTM_A459_MK2206_30min_R2 2 LHYTPPLQSPIIDNDPLLGQSPWR 24 0 H0Y322;Q5TKA1;Q5TKA1-2;C9J5J4;H7C4T7;Q5TKA1-3 H0Y322 LIN9 Protein lin-9 homolog 1 LHYTPPLQS(1)PIIDNDPLLGQSPWR;LHYT(0.002)PPLQS(0.996)PIIDNDPLLGQS(0.003)PWR 118.44 9.94E-08 19418000 33583 48036 36841 49383 46768 43892 45411 36709 35382 41186 TRUE FALSE 36154.1403 45650.60209 38069.26055 45348.25093 44931.65333 45562.34082 39448.48115 41506.99234 38459.4624 39842.10419 0.907435514 1.14578793 0.955503263 1.138199195 1.12774298 1.143572654 0.990120425 1.041787154 0.965296969 1 15.28200622 -7.30069994 24.68261568 1.002783376 1.073725397 0.159619002 0.078657387 897.988666 564549.9081 0.032262869 0.02175202 5.00E-08 7.30069994 0.07094202 LIDLEDSADVGDQPGEVGYS(ph)GSPAEAPPSK ddPTM_A459_MK2206_30min_R2 1 LIDLEDSADVGDQPGEVGYSGSPAEAPPSK 30 0 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 LIDLEDSADVGDQPGEVGY(0.306)S(0.347)GS(0.347)PAEAPPS(0.001)K 80.984 0.00013488 0 17036 14834 16560 15961 17158 15529 18796 14559 14239 18545 TRUE FALSE 18340.28926 14097.36513 17112.10213 14656.93524 16484.29071 16119.96698 16328.06262 16461.91129 15477.48248 17939.87817 1.02231961 0.785811643 0.953858325 0.817003053 0.918863024 0.898554986 0.910154599 0.917615556 0.862741783 1 14.13088247 -10.99444309 3.121799099 1.002315494 0.895959674 0.187078905 0.063238457 24298225.04 29347412.12 489407.6794 0.014573808 1.01E-11 10.99444309 -0.10635582 LIDLES(ph)PTPESQK ddPTM_A459_MK2206_30min_R1 3 LIDLESPTPESQK 13 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 LIDLES(0.561)PT(0.439)PESQK;LIDLES(0.569)PT(0.431)PESQK;LIDLES(0.85)PT(0.149)PES(0.001)QK 192.4 0.00010736 93018000 25360.9 26341.8 26107.3 21761.3 24123.6 21075.7 22977.9 22050.9 21829.8 19771.3 TRUE FALSE 23203.82228 24626.94403 24335.20922 23437.3591 23162.70593 22268.98792 21445.08622 21858.11131 24099.08583 22220.71791 1.044242692 1.108287506 1.09515855 1.05475256 1.042392331 1.002172298 0.965094211 0.983681598 1.084532279 1 14.43961781 -6.354814453 1.834614464 1.003958289 1.083358014 0.4826131 0.033510983 0.291676632 1.940316524 0.01232647 0.015161066 4.42E-07 6.354814453 0.079399725 LIDLES(ph)PTPESQK ddPTM_A459_MK2206_30min_R2 2 LIDLESPTPESQK 13 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 LIDLES(0.856)PT(0.144)PESQK;LIDLES(0.632)PT(0.368)PESQK 198.29 0.0001541 36035000 181388 197134 197519 193294 181874 159623 197133 152675 145117 179028 TRUE FALSE 195275.2047 187344.6122 204104.1849 177501.2619 174732.7129 165697.5651 171249.2003 172630.1467 157739.0143 173186.331 1.127543979 1.081751724 1.178523638 1.024914962 1.008929007 0.956758909 0.98881476 0.996788521 0.91080522 1 17.40196554 -5.95832628 3.783313294 0.97832471 1.124272845 0.79090543 0.034803432 0.097951636 2.979596147 0.010047071 0.015031728 1.10E-06 5.95832628 0.145948135 LIDLESPT(ph)PESQK ddPTM_A459_MK2206_30min_R1 1 LIDLESPTPESQK 13 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 LIDLES(0.167)PT(0.832)PESQK 180.3 0.00026161 10162000 4304.7 4731.8 5019.1 4094.2 4246.5 3820 3808.5 3542.5 3918 3655.2 TRUE FALSE 3938.56266 4423.75896 4678.417476 4409.535993 4077.352913 4036.285099 3554.441914 3511.528296 4325.290121 4108.033771 0.958746417 1.076855548 1.138845914 1.073393316 0.992531498 0.982534547 0.865241649 0.854795382 1.052885726 1 12.00423233 -6.593427962 2.126451663 0.933569408 1.06750325 0.350966741 0.069617264 0.316778902 2.912186781 0.026570002 0.027344077 2.55E-07 6.593427962 0.133933842 LIDLESPT(ph)PESQK ddPTM_A459_MK2206_30min_R2 2 LIDLESPTPESQK 13 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 LIDLES(0.188)PT(0.81)PES(0.002)QK;LIDLES(0.225)PT(0.775)PES(0.001)QK 203.74 0.00012066 16530400 68737 77454 77331 72966 74038 70781 85459 65122 58884 74570 TRUE FALSE 73999.55757 73607.74699 79909.17694 67004.44439 71130.89611 73474.62055 74238.13065 73633.669 64005.62388 72136.78701 1.025822755 1.02039126 1.107745164 0.928852631 0.986055785 1.018545788 1.029129987 1.020750605 0.887281324 1 16.13844755 -5.831834519 0.414307366 0.976640283 1.056230094 0.13514401 0.05278484 5.546037187 1.389253182 0.049409026 0.202041326 1.47E-06 5.831834519 0.079589811 LIDLHSPS(ph)EIVK ddPTM_A459_MK2206_30min_R2 3 LIDLHSPSEIVK 12 0 P60866;P60866-2;G3XAN0 P60866 RPS20 40S ribosomal protein S20 1 LIDLHS(0.001)PS(0.999)EIVK;LIDLHS(0.004)PS(0.996)EIVK;LIDLHS(0.151)PS(0.849)EIVK 103.3 0.0071606 8308800 108328 127827 97040 129613 109839 102214 145106 130373 93644 105755 TRUE FALSE 116621.675 121479.2971 100275.2652 119023.2033 105526.169 106103.8254 126053.4079 147413.1987 101788.9859 102304.223 1.139949765 1.187431892 0.980167409 1.163424146 1.031493773 1.03714023 1.232142762 1.440929752 0.994963677 1 16.64250617 -7.269155143 24.67697267 1.203753198 1.090060857 0.047441469 0.133351633 1006.38579 3218660.617 0.053386977 0.036722725 5.38E-08 7.269155143 -0.113692341 LIEDNEY(ph)TAR ddPTM_A459_MK2206_30min_R2 1 LIEDNEYTAR 10 0 P12931;P12931-2;Q573B4;J3QRU1;P06241-3;P06239;P06241-2;P06241;P06239-3;P07947 P12931 SRC;LCK;YES1;FYN Proto-oncogene tyrosine-protein kinase Src;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Fyn;Tyrosine-protein kinase Lck;Tyrosine-protein kinase Yes 1 LIEDNEY(0.949)T(0.051)AR 150.81 0.0097299 20869000 88134 101010 77972 86127 87219 91216 84521 66807 66981 74487 TRUE FALSE 94881.6068 95993.99028 80571.54756 79090.14859 83794.34382 94687.2888 73423.29117 75538.90428 72806.88631 72056.49529 1.316766884 1.332204542 1.118171891 1.097613036 1.162897855 1.314070139 1.018968392 1.04832887 1.010413926 1 16.13684086 -1.522878745 0.175374653 0.964391595 2.484874774 0.577293047 0.082417513 46.35487001 0.512936404 0.216352475 18.64414648 0.03 1.522878745 1.520483179 LIEDTEDWRPR ddPTM_A459_MK2206_30min_R1 2 LIEDTEDWRPR 11 1 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6;H0YBI4;Q96HC4-3;Q96HC4-2 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 0 ; 181.87 0.00011178 20000100 8681.2 8893.3 9079.9 7796.9 9172 8257.2 8634.2 8550.9 7763.1 7271.8 FALSE TRUE 7942.818353 8314.344554 8463.581686 8397.418589 8806.659818 8724.715528 8058.228272 8476.140383 8570.102026 8172.685483 0.971873733 1.017333234 1.035593711 1.027498073 1.07757234 1.067545735 0.985995153 1.037130378 1.048627412 1 12.9965945 -4.687685679 1.770672421 1.037286663 0.938324634 0.346872297 0.026048276 1.349667214 3.56779604 0.007355593 0.243872574 2.05E-05 4.687685679 -0.098962029 LIEDTEDWRPR ddPTM_A459_MK2206_30min_R2 2 LIEDTEDWRPR 11 1 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6;H0YBI4;Q96HC4-3;Q96HC4-2 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 0 ; 176.6 0.00019581 6509300 26432.4 35295 29103 36056 34080 39397 36844 27372 28053.5 29190 FALSE TRUE 28456.08487 33542.30162 30073.27949 33110.10946 32741.84796 40896.28044 32006.33854 30949.61438 30493.54272 28237.53269 1.007739776 1.187862339 1.065010878 1.172556747 1.159515186 1.448295107 1.133467959 1.096045279 1.079894021 1 14.78532642 -8.159606815 1.783891567 1.019907407 1.173459341 0.191111972 0.108983011 0.620190914 3.536612647 0.104404893 0.032027202 6.92E-09 8.159606815 0.153551934 LIESLS(ph)PDFCHQNK ddPTM_A459_MK2206_30min_R1 2 LIESLSPDFCHQNK 14 0 Q9H6R7;Q9H6R7-2 Q9H6R7 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 1 LIES(0.092)LS(0.908)PDFCHQNK;LIES(0.078)LS(0.922)PDFCHQNK 79.347 0.023962 52382000 11861.4 10742.7 10975.4 14312.9 8912.6 8171.9 8371.8 9756.4 9608.7 8315.8 TRUE FALSE 10852.52564 10043.34828 10230.42043 15415.28204 8557.592269 8634.585916 7813.332497 9671.100823 10607.55875 9346.024085 1.161191705 1.074611855 1.094628083 1.649394641 0.915639869 0.923877987 0.836006031 1.034782356 1.134980892 1 13.19013704 LIESLS(ph)PDFCHQNK ddPTM_A459_MK2206_30min_R2 2 LIESLSPDFCHQNK 14 0 Q9H6R7;Q9H6R7-2 Q9H6R7 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 1 LIES(0.034)LS(0.966)PDFCHQNK;LIES(0.42)LS(0.58)PDFCHQNK 104.78 0.0040021 34004000 102030.1 129033 118069.8 130991.3 121004.3 114942 140951 97511.6 109514.4 109708 TRUE FALSE 109841.6029 122625.4089 122006.1882 120288.8918 116253.0632 119316.1984 122443.9644 110256.7009 119039.7646 106128.2369 1.034989425 1.155445642 1.149610996 1.133429662 1.095401813 1.124264397 1.15373597 1.038900712 1.121659682 1 16.69544903 -9.248210346 0.581854773 0.994980768 1.121971599 0.394465796 0.041596008 2.577130538 1.276568663 0.072927722 0.01749772 5.65E-10 9.248210346 0.126990831 LIEVDDER ddPTM_A459_MK2206_30min_R1 2 LIEVDDER 8 0 P62753;A2A3R7 P62753 RPS6 40S ribosomal protein S6 0 ; 157.34 0.0075196 31874400 8571.3 8953.6 8910 8587.1 9112.9 8122.9 9288.9 7960.9 7078.5 6093.3 FALSE TRUE 7842.265925 8370.719013 8305.214025 9248.47993 8749.913896 8582.811578 8669.25443 7891.298691 7814.335406 6848.184006 1.145159931 1.222326825 1.212761517 1.350501085 1.277698422 1.253297454 1.265920195 1.152319897 1.141081402 1 12.74150575 -8.446602703 1.162958093 1.004340471 1.25021002 0.673589938 0.052748593 0.29186696 0.859542751 0.053009154 0.016886364 3.58E-09 8.446602703 0.245869548 LIEVDDER ddPTM_A459_MK2206_30min_R2 2 LIEVDDER 8 0 P62753;A2A3R7 P62753 RPS6 40S ribosomal protein S6 0 ; 139.97 0.03284 46973000 76337 97438 91498 103633 101584 108014 113820 82515 104544 102558 FALSE TRUE 82181.41941 92599.37061 94548.49765 95165.85239 97595.30174 112124.5485 98875.29728 93299.99382 113637.0481 99211.54086 0.828345359 0.933352812 0.952998984 0.959221594 0.983709162 1.130156305 0.996610842 0.940414724 1.145401504 1 16.59822033 -3.426855621 0.472364569 1.038146092 0.18488583 0.520089184 0.061184185 13.3051406 0.843276429 0.037616943 8.336071729 0.000374235 3.426855621 -0.853260261 LIEVDDERK ddPTM_A459_MK2206_30min_R2 1 LIEVDDERK 9 1 P62753;A2A3R7 P62753 RPS6 40S ribosomal protein S6 0 87.639 0.043638 1719200 12194 15683 14373 12722 15626 13566 16549 14934 14833 17575 FALSE TRUE 13127.58202 14904.20503 14852.18865 11682.5719 15012.44473 14082.26364 14376.09642 16885.92508 16123.14753 17001.52919 0.772141251 0.876639087 0.873579575 0.687148301 0.883005555 0.828293942 0.845576669 0.99320037 0.948335138 1 14.05337689 -7.705186631 4.87369313 0.97863467 0.823327097 0.619091008 0.056491691 0.134384119 6.512065156 0.028376633 0.015410824 1.97E-08 7.705186631 -0.155307572 LIGEYGLR ddPTM_A459_MK2206_30min_R2 1 LIGEYGLR 8 0 P46781;B5MCT8;C9JM19;F2Z3C0;A8MXK4 P46781 RPS9 40S ribosomal protein S9 0 148.33 0.021927 6971600 26526 34017 27894 42003 44060 41979 37187 26011 26248 27865 FALSE TRUE 28556.85096 32327.76525 28823.97204 38571.22054 42329.98302 43576.54026 32304.30223 29410.72701 28531.00359 26955.76733 1.0593967 1.199289371 1.069306308 1.430907904 1.570349769 1.616594316 1.198418944 1.091073634 1.058437819 1 14.71830636 -7.621288883 3.862927085 1.056241731 1.328347522 0.320886763 0.177542771 0.321994017 9.077199419 0.103861878 0.056564722 2.39E-08 7.621288883 0.272105791 LIGTAVPQRT(ph)SPTGPK ddPTM_A459_MK2206_30min_R1 1 LIGTAVPQRTSPTGPK 16 1 C9JB30;Q9UPY8 C9JB30 MAPRE3 Microtubule-associated protein RP/EB family member 3 1 LIGT(0.003)AVPQRT(0.683)S(0.102)PT(0.213)GPK 149.24 0.0027463 11945000 4202.3 4691.7 4381.8 4579.4 4479.6 3283.1 3054.4 5065.8 2869.5 1872.1 TRUE FALSE 3844.872318 4386.269477 4084.375624 4932.106181 4301.168046 3468.986285 2850.646549 5021.510245 3167.794794 2104.029882 1.827384844 2.084699231 1.941215598 2.344123638 2.044252358 1.648734324 1.354850791 2.38661546 1.505584508 1 11.03893948 -6.755506303 7.797254631 1.651228046 2.061589806 0.29963919 0.349832323 0.187811584 78.25837044 0.116265955 0.11050276 1.76E-07 6.755506303 0.41036176 LIGTAVPQRT(ph)SPTGPK ddPTM_A459_MK2206_30min_R2 1 LIGTAVPQRTSPTGPK 16 1 C9JB30;Q9UPY8 C9JB30 MAPRE3 Microtubule-associated protein RP/EB family member 3 1 LIGT(0.01)AVPQRT(0.493)S(0.493)PT(0.004)GPK 114.06 0.022418 3691100 9690.7 20470 16233 17335 24562 16614 22203 15887 22877 14015 TRUE FALSE 10432.62744 19453.48957 16774.20012 15918.67505 23597.57247 17246.25741 19287.71943 17963.48545 24866.80011 13557.6917 0.769498796 1.43486738 1.237246022 1.174143461 1.740530246 1.272064434 1.422640362 1.324966362 1.834147041 1 13.72682395 -4.758946042 24.97929556 1.39041899 0.769497974 0.37451498 0.237369396 68.75711826 688691.5512 0.055905119 0.368263145 1.74E-05 4.758946042 -0.620921017 LIGTAVPQRTS(ph)PTGPK ddPTM_A459_MK2206_30min_R1 1 LIGTAVPQRTSPTGPK 16 1 C9JB30;Q9UPY8 C9JB30 MAPRE3 Microtubule-associated protein RP/EB family member 3 1 LIGTAVPQRT(0.009)S(0.988)PT(0.002)GPK 176.94 5.63E-06 11709000 2757.8 3116.4 3187.9 3237.9 3007.5 2383.5 2370.1 2988.5 1980.4 1389.9 TRUE FALSE 2523.234628 2913.521794 2971.51423 3487.283619 2887.704907 2518.45171 2211.994953 2962.37186 2186.269667 1562.091305 1.615292666 1.865141803 1.902266673 2.232445445 1.848614672 1.612230797 1.416047158 1.896414025 1.399578667 1 10.60926307 -6.811391408 3.332268104 1.504630325 1.915253105 0.425407516 0.249526899 0.266734441 6.047049099 0.091047627 0.08233539 1.54E-07 6.811391408 0.410622779 LIHEPSAALLAYGIGQDS(ph)PTGK ddPTM_A459_MK2206_30min_R2 1 LIHEPSAALLAYGIGQDSPTGK 22 0 Q0VDF9 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 1 LIHEPSAALLAYGIGQDS(0.779)PT(0.221)GK 92.41 0.0012015 0 3649.4 4930.7 4455.9 5960.6 5134.6 5102.9 4709.3 4327.5 4257.3 3578.5 TRUE FALSE 3928.80087 4685.848608 4604.457482 5473.599913 4932.989805 5297.094435 4090.963253 4893.119109 4627.592259 3461.733838 1.134922861 1.353613197 1.330101532 1.581172952 1.425005513 1.530185359 1.181767127 1.413487962 1.336784535 1 11.75727909 -9.666930038 0.800216515 0.987665992 1.37979878 0.416637444 0.129769468 8.098820124 4.678740712 0.453708228 0.044670176 2.15E-10 9.666930038 0.392132788 LIHPDEDISLEER ddPTM_A459_MK2206_30min_R1 4 LIHPDEDISLEER 13 0 J3KS31;J3QRS9;X6R4W8;O43670-3;O43670-2;O43670;O43670-4 J3KS31 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 0 ;;; 182.25 0.00013852 25833400 12619.2 12350.5 12779.8 11080.5 14706.6 12500.8 13925 11981.9 11656.5 10103.2 FALSE TRUE 11545.87077 11546.48021 11912.34278 11933.92203 14120.80498 13208.58449 12996.08866 11877.14351 12868.23489 11354.86069 1.016821878 1.01687555 1.049096339 1.050996781 1.243591213 1.163253769 1.144539683 1.045996409 1.133279856 1 13.47102239 -6.023633914 24.53497334 1.129107309 1.030445799 0.326134098 0.062307173 665.0965071 690453.4146 0.018587329 0.024154277 9.47E-07 6.023633914 -0.09866151 LIHPDEDISLEER ddPTM_A459_MK2206_30min_R2 2 LIHPDEDISLEER 13 0 J3KS31;J3QRS9;X6R4W8;O43670-3;O43670-2;O43670;O43670-4 J3KS31 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 0 ; 171.32 0.00028767 9427200 29509 31869 33839 37712 39253 43162 38088 28060 34380 34757 FALSE TRUE 31768.23173 30286.4318 34967.17537 34630.80897 37711.72999 44804.56016 33086.99985 31727.53834 37370.31026 33622.88194 0.944839642 0.900768467 1.039981505 1.029977413 1.121609089 1.332561564 0.984061982 0.943629353 1.111454703 1 15.03715577 -5.459278598 2.081895307 1.082866594 0.919238771 0.249435748 0.102474332 0.49595671 4.137488187 0.03189767 0.088300135 3.47E-06 5.459278598 -0.163627823 LIHTLDDR ddPTM_A459_MK2206_30min_R1 2 LIHTLDDR 8 0 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;H7C3A1 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 0 ; 145.16 0.0028552 7294400 5590.2 5733.5 5482.1 4618.4 6373 5353.8 6244.1 5701 4933.5 5053.6 FALSE TRUE 5114.724135 5360.248108 5109.990326 4974.109968 6119.149915 5656.927529 5827.567482 5651.156758 5446.35498 5679.678121 0.900530633 0.943759135 0.899697169 0.875773215 1.07737618 0.995994387 1.026038335 0.994978349 0.958919654 1 12.47159346 -6.248178882 24.99973074 1.008846591 0.907338337 0.714584437 0.03216815 443.7717127 836633.2384 0.009647187 0.012376497 5.65E-07 6.248178882 -0.101508254 LIHTLDDR ddPTM_A459_MK2206_30min_R2 3 LIHTLDDR 8 0 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;H7C3A1 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 0 ;; 160.63 0.00016201 7771000 56848 68829 59206 71929 71935 70942 66992 52716 60112 67394 FALSE TRUE 61200.32659 65411.05195 61179.89849 66052.17061 69110.47046 73641.74752 58195.86993 59606.1622 65340.4331 65194.9393 0.938728178 1.003314868 0.938414839 1.01314874 1.06005882 1.12956233 0.892643977 0.914275906 1.002231673 1 15.99247236 LIIES(ph)PSNTSSTEPA ddPTM_A459_MK2206_30min_R1 2 LIIESPSNTSSTEPA 15 0 P38432 P38432 COIL Coilin 1 LIIES(0.795)PS(0.205)NTSSTEPA;LIIES(0.841)PS(0.159)NTSSTEPA 201.04 1.70E-05 37879800 5819.9 5259 5756.3 4830.9 6166.8 5523.6 5827.6 5211.3 4492.5 4286 TRUE FALSE 5324.886943 4916.638144 5365.578394 5202.976755 5921.163298 5836.341459 5438.851437 5165.738154 4959.511452 4816.982038 1.105440482 1.020688495 1.11388798 1.080132065 1.229226775 1.211617858 1.129099381 1.072401374 1.029588944 1 12.23391383 -8.095999528 2.240143485 1.008860094 1.127581343 0.389213568 0.056694766 0.385168669 3.467890761 0.056077897 0.017737066 8.02E-09 8.095999528 0.118721249 LIIES(ph)PSNTSSTEPA ddPTM_A459_MK2206_30min_R2 1 LIIESPSNTSSTEPA 15 0 P38432 P38432 COIL Coilin 1 LIIES(0.773)PS(0.227)NTSSTEPA 231.74 5.27E-14 8288600 27928 31430 28860 40687 36360 39288 42875 29755 35534 35118 TRUE FALSE 30066.18915 29869.2319 29822.178 37362.74195 34932.32371 40783.13237 37245.461 33644.08066 38624.68309 33972.10254 0.885025857 0.879228239 0.877843165 1.099806581 1.028264991 1.200488911 1.096354309 0.990344375 1.136952976 1 15.05206289 -5.758861555 24.99259902 1.082170387 0.88055195 0.698143163 0.059692142 35.83632755 347432.5658 0.016322856 0.026694299 1.74E-06 5.758861555 -0.201618437 LIIESPS(ph)NTSSTEPA ddPTM_A459_MK2206_30min_R1 2 LIIESPSNTSSTEPA 15 0 P38432 P38432 COIL Coilin 1 LIIES(0.407)PS(0.592)NTSSTEPA;LIIES(0.371)PS(0.629)NTSSTEPA 175.48 1.91E-05 41514000 3679.3 3771.5 4148.4 2779.65 3986.4 3551.9 3794.4 3209.8 3007.5 2753.28 TRUE FALSE 3366.356214 3525.974664 3866.818166 2993.739125 3827.613247 3753.005509 3541.282499 3181.737057 3320.140387 3094.377113 1.08789462 1.139478007 1.249627316 0.967477142 1.236957587 1.212846842 1.144424991 1.028231835 1.072959199 1 11.59543331 -7.747824532 9.550698564 1.037881927 1.150937661 0.308948328 0.07844441 0.250788714 157.1765557 0.038045535 0.021038458 1.79E-08 7.747824532 0.113055733 LIIESPS(ph)NTSSTEPA ddPTM_A459_MK2206_30min_R2 2 LIIESPSNTSSTEPA 15 0 P38432 P38432 COIL Coilin 1 LIIES(0.219)PS(0.781)NTSSTEPA;LIIES(0.163)PS(0.836)NTSSTEPA 186.76 2.29E-05 26784600 39061 42857 42357 49966 47873 53003 50686 39376 34504 35939 TRUE FALSE 42051.54019 40728.7837 43769.16124 45883.61797 45993.26548 55020.06631 44030.86732 44522.5784 37505.09555 34766.31337 1.209548443 1.171501369 1.258953193 1.319772317 1.322926161 1.582568325 1.26648077 1.280624089 1.078776894 1 15.08540247 -8.32786538 2.497376911 1.000787698 1.308855341 0.511711334 0.104041607 0.246489878 2.88551778 0.107665027 0.030159518 4.70E-09 8.32786538 0.308067643 LIIS(ph)TPNQR ddPTM_A459_MK2206_30min_R2 1 LIISTPNQR 9 0 H0YE68;Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95 H0YE68 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 LIIS(0.5)T(0.5)PNQR 102.06 0.016467 2512000 23383 25903 23740 28849 20618 26202 22838 18867 18896 20805 TRUE FALSE 25173.22046 24616.69469 24531.47975 26491.94442 19808.43372 27199.13547 19839.34317 21332.98168 20539.53992 20126.13455 1.25077274 1.223120844 1.2188868 1.316295702 0.984214513 1.35143365 0.9857503 1.059964179 1.020540724 1 14.29678249 -7.297250176 0.846287157 0.995001622 1.236301302 0.444628621 0.102591591 0.574929172 0.796469852 0.078544128 0.045310748 5.04E-08 7.297250176 0.24129968 LIPGPLS(ph)PVAR ddPTM_A459_MK2206_30min_R1 3 LIPGPLSPVAR 11 0 P48634;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR 146.16 0.000689 350865200 14621 13895.5 13096 11226 13751.9 12727.4 12497.6 10618.6 9559.8 8666.6 TRUE FALSE 13377.40717 12990.90042 12207.08001 12090.62847 13204.1327 13448.01439 11663.90791 10525.7627 10553.57542 9740.283837 1.373410405 1.333729144 1.253257114 1.241301451 1.355620937 1.380659395 1.197491583 1.080642297 1.083497729 1 13.2497481 -7.603954099 2.677732789 1.055340154 1.317774023 0.858146261 0.048846666 0.109464417 1.579652767 0.029797221 0.015322364 2.49E-08 7.603954099 0.26243387 LIPGPLS(ph)PVAR ddPTM_A459_MK2206_30min_R2 4 LIPGPLSPVAR 11 0 P48634;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR 118.61 0.0052603 217349700 111956 140999 108191 133150 131891 121630 121228 99561 100920 102097 TRUE FALSE 120527.4374 133997.1947 111798.0339 122271.2191 126712.2966 126258.7149 105310.618 112573.9645 109697.8392 98765.58325 1.220338436 1.35671952 1.131953361 1.237994198 1.28296004 1.278367532 1.066268375 1.139809647 1.110688922 1 16.59172077 -7.857543417 0.686264949 1.014716108 1.257707293 0.587561768 0.067507885 0.499055941 0.473584802 0.064833662 0.031384295 1.39E-08 7.857543417 0.242991185 LIPGS(ph)NLDSEPR ddPTM_A459_MK2206_30min_R2 2 LIPGSNLDSEPR 12 0 H0YM51;A0A3B3IRW9;Q6P4E1-2;Q6P4E1-5;Q6P4E1 H0YM51 CASC4 Protein CASC4 1 LIPGS(0.715)NLDS(0.285)EPR;LIPGS(0.995)NLDS(0.005)EPR 101.53 0.013506 1492100 13746.4 12509.7 15277.8 10206.5 14069.6 16009.3 17522.8 13923 15448.5 12945.5 TRUE FALSE 14798.83495 11888.48649 15787.15423 9372.596301 13517.15681 16618.54513 15222.03531 15742.7839 16792.18261 12523.0894 1.181723973 0.949325371 1.260643738 0.748425249 1.079378769 1.32703238 1.21551758 1.257100657 1.340897767 1 13.61230289 -6.625576572 6.342918379 1.242178371 1.02954825 0.262494388 0.154546116 0.262369583 14.08479938 0.049019298 0.048941126 2.37E-07 6.625576572 -0.21263012 LIPITGGNARS(ph)PEDQLGK ddPTM_A459_MK2206_30min_R1 2 LIPITGGNARSPEDQLGK 18 1 Q9UK61-3;Q9UK61;Q9UK61-2 Q9UK61-3 FAM208A Protein FAM208A 1 LIPIT(0.003)GGNARS(0.997)PEDQLGK;LIPIT(0.084)GGNARS(0.916)PEDQLGK 82.765 0.0051267 35222000 7803.9 8312.8 8526.4 9806 9968 7470.4 5945.3 10118 4772.7 2376.2 TRUE FALSE 7140.137325 7771.635209 7947.651724 10561.25982 9570.953452 7893.367592 5548.699885 10029.53939 5268.839244 2670.581595 2.673626351 2.910090904 2.976000336 3.954666593 3.583846106 2.955673628 2.077712171 3.755563736 1.972918279 1 11.38293825 -8.506714801 4.606195843 1.002956092 3.099234226 0.63366985 0.520230991 0.105529424 6.791269628 0.52220604 0.136176853 3.11E-09 8.506714801 2.096278134 LIQNLDANHDGR ddPTM_A459_MK2206_30min_R1 1 LIQNLDANHDGR 12 0 Q96FQ6 Q96FQ6 S100A16 Protein S100-A16 0 237.67 4.92E-13 5770700 4167.5 4381.2 4040.9 3558.3 4383.9 4502 5025 3764.9 4478.7 4256.1 FALSE TRUE 3813.032241 4095.983084 3766.614967 3832.360883 4209.27998 4756.899349 4689.791419 3731.983876 4944.276892 4783.3778 0.797142187 0.856295123 0.787438317 0.80118298 0.879980666 0.994464487 0.980435085 0.780198436 1.033637128 1 12.22381403 -6.499404968 4.142127492 0.945412301 0.813530498 0.513657593 0.066939306 0.19646602 7.711913244 0.02180964 0.02356812 3.17E-07 6.499404968 -0.131881803 LIQNLDANHDGR ddPTM_A459_MK2206_30min_R2 4 LIQNLDANHDGR 12 0 Q96FQ6 Q96FQ6 S100A16 Protein S100-A16 0 ;;; 182.23 0.0001457 26348800 122658 150595 131510 149357 125073 145121 139886 114941 130060 121619 FALSE TRUE 132048.7908 143116.6713 135894.4778 137154.0553 120162.0056 150643.6813 121518.8002 129964.1834 141372.3837 117650.582 1.12238111 1.216455277 1.15506847 1.165774559 1.021346461 1.280432946 1.03287887 1.104662477 1.201629276 1 16.84414893 -14.52287875 0.207232433 0.338210392 1.163823917 0.237227188 0.076129342 208.8077419 2.072160047 57.56950541 0.160893211 3.00E-15 14.52287875 0.825613525 LIQYCHSK ddPTM_A459_MK2206_30min_R1 1 LIQYCHSK 8 0 O60218;C9JRZ8;C9JRZ8-2 O60218 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 93.649 0.033393 27812000 5398.3 5277.1 5134.4 5258.3 5153.9 4655.4 5473.9 4512.2 3889.7 3910.1 FALSE TRUE 4939.146237 4933.559831 4785.891233 5663.295177 4948.609249 4918.984725 5108.746119 4472.750311 4294.048234 4394.512708 1.123934908 1.122663685 1.089060734 1.288719718 1.126088278 1.119347025 1.162528466 1.017803476 0.977138654 1 12.10148748 -7.825215798 4.727209984 0.9921964 1.147960017 0.639480329 0.051498374 0.135183186 5.876555499 0.030032271 0.014138913 1.50E-08 7.825215798 0.155763618 LIQYCHSK ddPTM_A459_MK2206_30min_R2 1 LIQYCHSK 8 0 O60218;C9JRZ8;C9JRZ8-2 O60218 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 112.11 0.015896 31166000 81224 117290 94548 120790 108630 95308 103510 91961 99703 93232 FALSE TRUE 87442.57189 111465.5492 97700.18313 110921.0706 104364.6404 98935.01273 89919.01266 103980.6184 108374.9867 90189.84748 0.969538971 1.235899076 1.083272518 1.229862049 1.15716617 1.096963965 0.996997059 1.152908241 1.201631777 1 16.46067742 -6.790756368 11.13273203 1.09342879 1.143120939 0.054213773 0.091283998 1.8361025 686.6485464 0.031456495 0.027918225 1.62E-07 6.790756368 0.049692149 LIRPEYAWIVQPVS(ph)GAVYDRPGASPK ddPTM_A459_MK2206_30min_R2 1 LIRPEYAWIVQPVSGAVYDRPGASPK 26 2 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 1 LIRPEYAWIVQPVS(0.519)GAVY(0.34)DRPGAS(0.141)PK 65.207 0.0006557 4143400 34414 32741 39049 29526 33420 24650 37410 27766 26026 31286 TRUE FALSE 37048.7623 31115.12955 40350.87417 27113.63135 32107.76288 25588.07302 32498.02206 31395.11153 28289.69444 30265.14038 1.22413978 1.028084759 1.333245895 0.895870001 1.060882668 0.84546355 1.073777344 1.037335731 0.934728671 1 14.88536942 -5.774152444 24.99980428 0.981734716 1.178449642 0.507439501 0.097453918 184.033461 361895.1703 0.026000681 0.038854256 1.68E-06 5.774152444 0.196714925 LIRPEYAWIVQPVSGAVY(ph)DRPGASPK ddPTM_A459_MK2206_30min_R1 1 LIRPEYAWIVQPVSGAVYDRPGASPK 26 2 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 1 LIRPEYAWIVQPVS(0.262)GAVY(0.709)DRPGAS(0.029)PK 57.068 0.025788 18424000 1131.7 1171.4 1213.3 1144.2 878.27 699.92 908.77 1206.6 1149.5 1104.1 TRUE FALSE 1035.442972 1095.141647 1130.944576 1232.326482 843.2866461 739.5488655 848.1476114 1196.050823 1268.994639 1240.884244 0.834439616 0.882549402 0.911402157 0.993103498 0.679585264 0.595985378 0.683502604 0.96386978 1.022653519 1 10.27715282 -7.911813954 6.902516905 1.005388611 0.800551916 0.395996148 0.113068377 0.257728836 16.64434845 0.072978609 0.03468661 1.23E-08 7.911813954 -0.204836695 LIRPEYAWIVQPVSGAVYDRPGAS(ph)PK ddPTM_A459_MK2206_30min_R1 1 LIRPEYAWIVQPVSGAVYDRPGASPK 26 2 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 1 LIRPEYAWIVQPVS(0.11)GAVY(0.342)DRPGAS(0.548)PK 90.884 1.48E-05 64585000 6009 7852.5 8341.3 6908.4 4926 4673.5 5369.3 5442.8 6530.3 7447.1 TRUE FALSE 5497.902995 7341.300823 7775.115796 7440.486165 4729.786989 4938.109531 5011.123794 5395.214173 7209.148054 8369.702971 0.656881494 0.877127999 0.928959585 0.888978521 0.565108105 0.589998181 0.59872182 0.644612383 0.861338578 1 13.03096071 -4.468938318 15.44116638 0.753381202 0.000122006 0.035735409 0.153262601 3602802.283 29047670.68 0.041169374 81759562.51 3.40E-05 4.468938318 -0.753259196 LIRPEYAWIVQPVSGAVYDRPGAS(ph)PK ddPTM_A459_MK2206_30min_R2 1 LIRPEYAWIVQPVSGAVYDRPGASPK 26 2 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 1 LIRPEYAWIVQPVS(0.036)GAVY(0.134)DRPGAS(0.83)PK 66.853 0.00054974 4210300 33361 26589 30604 27521 27102 21759 31859 25011 20094 30944 TRUE FALSE 35915.14381 25268.62892 31624.32209 25272.44626 26037.8393 22587.05399 27675.87503 28280.02358 21841.7398 29934.29981 1.199799028 0.844136295 1.056457718 0.844263818 0.869832916 0.754554278 0.924553947 0.944736431 0.729655944 1 14.8695119 -2.519036781 1.399483957 0.877531164 199.9930808 0.459769825 0.099007328 835.7580991 3.408671914 0.027230121 532411.3585 0.003026657 2.519036781 199.1155497 LIRPEYAWIVQPVSGAVYDRPGAS(ph)PKR ddPTM_A459_MK2206_30min_R1 1 LIRPEYAWIVQPVSGAVYDRPGASPKR 27 3 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 1 LIRPEYAWIVQPVS(0.172)GAVY(0.136)DRPGAS(0.692)PKR 48.489 0.027817 11330000 1888.7 1995.3 2087.3 1740.2 1656 1364 1534.8 1812.2 1451.9 1248.4 TRUE FALSE 1728.056147 1865.405607 1945.619892 1874.230506 1590.038013 1441.228501 1432.416292 1796.356126 1602.830201 1403.061217 1.231632751 1.329525458 1.386696367 1.335815204 1.133263463 1.027202865 1.020922163 1.28031201 1.142380804 1 10.45436224 -6.297877839 5.136547792 1.105268148 1.326799286 0.626877209 0.083300509 0.141166728 9.83822553 0.027566913 0.032182829 5.04E-07 6.297877839 0.221531138 LIS(ph)PLASPADGVK ddPTM_A459_MK2206_30min_R2 1 LISPLASPADGVK 13 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LIS(0.679)PLAS(0.321)PADGVK 85.45 0.043156 0 13484 13870 8548.7 12516 9942.4 10507 13820 9432.6 8858.8 11036 TRUE FALSE 14516.34541 13181.23597 8833.709391 11493.40276 9552.011419 10906.85125 12005.4174 10665.47321 9629.322411 10675.89622 1.359730846 1.234672546 0.827444292 1.07657498 0.894726889 1.021633315 1.124534854 0.999023687 0.901968529 1 13.38206957 -5.073081953 5.252107163 0.988276092 1.333724324 0.701005217 0.084250416 0.101603295 5.071836719 0.021350233 0.062240336 8.45E-06 5.073081953 0.345448233 LIS(ph)WYDNEFGYSNR ddPTM_A459_MK2206_30min_R1 1 LISWYDNEFGYSNR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 LIS(1)WYDNEFGYSNR 141.06 0.00055737 9427300 2240.6 2655.5 2197.5 1655.3 2285.4 1991.2 1991.2 1401.1 2072.3 1842.6 TRUE FALSE 2050.025204 2482.626467 2048.339823 1782.791493 2194.367679 2103.940023 1858.370681 1388.85033 2287.723001 2070.875199 0.989931796 1.198829591 0.989117946 0.860887944 1.05963299 1.015966594 0.897384199 0.670658633 1.104713119 1 11.0160249 -5.510172662 22.9833479 0.93543763 1.094279041 0.184132201 0.123961564 303.3587331 548725.2598 0.032940664 0.063554817 3.09E-06 5.510172662 0.158841411 LISDS(ph)VER ddPTM_A459_MK2206_30min_R1 2 LISDSVER 8 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LIS(0.024)DS(0.976)VER;LIS(0.002)DS(0.998)VER 99.815 0.018346 15042600 3911.1 4199.8 3892.2 3508.3 4601.7 4226.2 4994 4121.1 3963.7 4670.4 TRUE FALSE 3578.440407 3926.392257 3628.008308 3778.509874 4418.404545 4465.483792 4660.859372 4085.069657 4375.740799 5249.004412 0.681736978 0.748026092 0.691180274 0.719852676 0.841760494 0.85072967 0.887951125 0.778256091 0.833632525 1 12.35782809 -6.272467663 3.921769285 0.856342395 0.709769846 0.651039191 0.055572443 0.14759684 5.26653181 0.01675145 0.020389027 5.34E-07 6.272467663 -0.14657255 LISDS(ph)VER ddPTM_A459_MK2206_30min_R2 2 LISDSVER 8 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LIS(0.331)DS(0.669)VER;LIS(0.06)DS(0.94)VER 100.48 0.01781 23875000 27920 34103 32162 32159 30366 30207 37204 29133 28357 29768 TRUE FALSE 30057.57667 32409.49461 33234.26503 29531.50683 29173.67826 31356.54855 32319.07011 32940.78313 30823.4406 28796.6726 1.04378645 1.125459704 1.154100874 1.025518026 1.013091987 1.088894852 1.122319601 1.143909353 1.070382021 1 14.8136145 -6.991225662 24.97452935 1.09749692 1.074646836 0 0.053908294 845.3207916 2406038.523 0.019883337 0.01751318 1.02E-07 6.991225662 -0.022850084 LISQIVSS(ph)ITASLR ddPTM_A459_MK2206_30min_R1 1 LISQIVSSITASLR 14 0 Q9BQE3;F5H5D3;F8VVB9;Q9NY65;Q9NY65-2;C9J2C0;Q9H853;P68363;P68363-2;C9JDS9;P68366-2;P68366 Q9BQE3;P68363;P68366-2 TUBA1C;TUBA1B;TUBA8;TUBA4B;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1B chain;Tubulin alpha-4A chain 1 LISQIVS(0.079)S(0.921)ITASLR 218.34 1.06E-08 7046700 667.05 1072.4 817.22 600.7 864.14 685.81 1028.2 812.21 871.27 744.27 TRUE FALSE 610.3138947 1002.586565 761.7493833 646.9660181 829.719474 724.6399695 959.6106541 805.1089336 961.8416344 836.4757866 0.729625298 1.198584085 0.910665193 0.773442613 0.991922883 0.86630119 1.147206733 0.962501182 1.149873852 1 9.708179969 -7.253942448 24.96193939 1.061770541 0.922101752 0.24382403 0.131316506 902.0526796 3003499.697 0.049450992 0.037543358 5.57E-08 7.253942448 -0.139668789 LISWYDNEFGYS(ph)NR ddPTM_A459_MK2206_30min_R1 1 LISWYDNEFGYSNR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 LISWYDNEFGYS(1)NR 236.03 6.11E-15 6442500 1777.4 1730.6 1657.1 1333.2 1505.1 1601 1993 1339.1 1355.1 1029 TRUE FALSE 1626.222797 1617.937625 1544.620669 1435.883295 1445.14868 1691.647236 1860.050606 1327.39239 1495.967494 1156.480289 1.406182892 1.399018765 1.335622132 1.241597725 1.249609435 1.462754924 1.608372079 1.147786437 1.29355209 1 10.17552496 -8.650223514 1.309567859 1.006116654 1.367931485 0.454590485 0.119312136 0.58630282 2.088678122 0.119523199 0.03610877 2.24E-09 8.650223514 0.361814831 LISWYDNEFGYSNR ddPTM_A459_MK2206_30min_R1 2 LISWYDNEFGYSNR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 291.22 1.54E-65 290800000 5782 5348.9 6639.4 5372 6625.7 5814.9 6192.3 6180.9 4783.9 4853 FALSE TRUE 5290.210538 5000.685638 6188.736026 5785.752371 6361.784339 6144.134613 5779.222965 6126.861043 5281.203524 5454.226278 0.969928688 0.916846017 1.134668001 1.06078334 1.166395381 1.126490596 1.059586213 1.12332359 0.968277306 1 12.41315884 -5.256483303 24.99702028 1.087684015 0.943387341 0.448836768 0.060039634 330.1998509 1665416.832 0.014818751 0.036771308 5.54E-06 5.256483303 -0.144296674 LISWYDNEFGYSNR ddPTM_A459_MK2206_30min_R2 4 LISWYDNEFGYSNR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;; 208.51 8.21E-05 16466000 38390.7 46653.9 44049.8 48852.8 43215.4 35703.3 48662.4 38800.8 43159.6 48392 FALSE TRUE 41329.92151 44337.13517 45518.39835 44861.36997 41518.54626 37062.0141 42272.96843 43872.19778 46913.54399 46812.973 0.882873248 0.947112143 0.972345814 0.958310637 0.886902574 0.791703917 0.903018239 0.937180336 1.002148357 1 15.51462077 -8.134914939 3.012079637 1.002634214 0.907447009 0.380585684 0.047836006 0.331796761 5.380827533 0.045222386 0.014482637 7.33E-09 8.134914939 -0.095187205 LIT(ph)FGT(ph)WMY(ph)SVNK ddPTM_A459_MK2206_30min_R1 1 LITFGTWMYSVNK 13 0 Q96P09 Q96P09 BIRC8 Baculoviral IAP repeat-containing protein 8 3 LIT(1)FGT(0.965)WMY(0.951)S(0.084)VNK 94.547 0.039739 0 1308.1 633.62 516.13 524.77 2005.4 2188.7 2336.7 1371.4 510.01 563.5 TRUE FALSE 1196.839226 592.3712228 481.0965336 565.1878763 1925.520671 2312.622303 2180.823007 1359.409994 563.0273646 633.3106342 1.889813878 0.935356507 0.759653332 0.892433895 3.040404767 3.651639776 3.443528166 2.146513766 0.889022439 1 9.306769494 -6.253774633 24.85553516 2.537750429 1.080484402 0.295815639 0.914563454 639.8032547 2074777.319 0.287440909 0.363905213 5.57E-07 6.253774633 -1.457266027 LITEDVQGK ddPTM_A459_MK2206_30min_R2 1 LITEDVQGK 9 0 D6RAT0;P61247;D6RG13;D6RB09;D6RAS7;H0Y8L7;E9PFI5;D6RED7;D6RGE0 D6RAT0 RPS3A 40S ribosomal protein S3a 0 135.79 0.037342 2213600 21137 19726 15560 18853 22240 19342 22397 17460 16853 19315 FALSE TRUE 22755.26497 18746.43552 16078.76263 17312.64959 21366.74585 20078.07336 19456.247 19742.08195 18318.84348 18684.75313 1.217852054 1.003301215 0.860528503 0.926565605 1.143539104 1.074569903 1.041290022 1.056587786 0.980416672 1 14.18957388 -4.76007821 24.90864124 1.011358656 1.217852313 0.412630503 0.074498216 37.74250902 690398.6093 0.020636167 0.1255201 1.74E-05 4.76007821 0.206493657 LITPPPPPPS(ph)PER ddPTM_A459_MK2206_30min_R1 2 LITPPPPPPSPER 13 0 Q96HE9;J3QKY4;J3QR53 Q96HE9 PRR11 Proline-rich protein 11 1 LITPPPPPPS(1)PER;LIT(0.001)PPPPPPS(0.999)PER 123.1 0.0025195 10461400 3767 4039.1 4410.8 2867 3558.6 3561.5 4022.3 3710.2 3601.2 3664 TRUE FALSE 3446.596869 3776.153856 4111.407185 3087.816837 3416.853427 3763.149052 3753.979706 3677.762113 3975.557627 4117.923982 0.836974379 0.917004265 0.998417456 0.749847945 0.829751458 0.913846168 0.911619477 0.893110735 0.965427639 1 12.00770148 -8.312654963 1.031567183 1.00144424 0.875658677 0.311754889 0.0621137 0.680003185 1.520092473 0.061894985 0.020979372 4.87E-09 8.312654963 -0.125785563 LITPPPPPPS(ph)PER ddPTM_A459_MK2206_30min_R2 1 LITPPPPPPSPER 13 0 Q96HE9;J3QKY4;J3QR53 Q96HE9 PRR11 Proline-rich protein 11 1 LITPPPPPPS(1)PER 112.62 0.0048466 8758800 25546 30474 21556 31091 26347 27884 29054 17348 23608 32466 TRUE FALSE 27501.8214 28960.70547 22274.66628 28550.76584 25312.4844 28945.14516 25239.1749 19615.44316 25661.38117 31406.63708 0.875669093 0.922120551 0.709234364 0.909067907 0.805959719 0.921625104 0.803625515 0.624563627 0.817068733 1 14.93878185 -7.51275751 24.95279344 0.775308641 0.854277645 0.0056722 0.105320584 1104.810279 2723808.386 0.044516325 0.027704194 3.07E-08 7.51275751 0.078969004 LITSEEERS(ph)PAK ddPTM_A459_MK2206_30min_R1 2 LITSEEERSPAK 12 1 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 LIT(0.001)S(0.001)EEERS(0.998)PAK;LITSEEERS(1)PAK 104.7 0.0052985 68023000 5503.1 6309.3 5697.8 4916.4 4711.6 4592.9 5701.2 5611.9 7010.4 8223.9 TRUE FALSE 5035.032447 5898.563423 5311.049211 5295.06198 4523.926995 4852.946029 5320.88335 5562.83575 7739.156167 9242.738819 0.544755461 0.638183502 0.574618554 0.572888846 0.489457409 0.525054978 0.575682539 0.601860104 0.837322824 1 13.1741047 -8.399665847 2.068444639 0.999049345 0.559447076 0.941668553 0.036444188 0.069965872 0.615033112 0.038192738 0.010779787 3.98E-09 8.399665847 -0.439602269 LIVENLSS(ph)R ddPTM_A459_MK2206_30min_R1 4 LIVENLSSR 9 0 Q13247-3;Q13247;A0A590UJK4;A0A590UK01;A0A590UJP7;A0A590UK80;A0A0D9SEM4;B4DJK0;B4DUA4;Q13243-3;Q13243;Q08170 Q13247-3;Q08170 SRSF6;SRSF4;SRSF5 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 5;Serine/arginine-rich splicing factor 4 1 LIVENLS(0.002)S(0.998)R;LIVENLS(0.026)S(0.974)R;LIVENLS(0.07)S(0.93)R;LIVENLS(0.015)S(0.985)R 108.98 0.011693 43880000 27391.9 27145.1 27141 26743 23548.2 21209 23106.7 25142.2 17674.8 16116.2 TRUE FALSE 25062.07506 25377.94906 25298.74454 28802.75049 22610.22533 22409.83525 21565.2942 24922.3844 19512.15871 18112.79653 1.383666792 1.401106064 1.396733216 1.590187934 1.248301183 1.23723773 1.190610968 1.375954528 1.077258207 1 14.14472169 -6.432469822 6.858026314 1.204997529 1.436303996 0.568446051 0.10869538 0.205273842 13.30885347 0.032680702 0.036979235 3.69E-07 6.432469822 0.231306467 LIVENLSS(ph)R ddPTM_A459_MK2206_30min_R2 2 LIVENLSSR 9 0 Q13247-3;Q13247;A0A590UJK4;A0A590UK01;A0A590UJP7;A0A590UK80;A0A0D9SEM4;B4DJK0;B4DUA4;Q13243-3;Q13243;Q08170 Q13247-3;Q08170 SRSF6;SRSF4;SRSF5 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 5;Serine/arginine-rich splicing factor 4 1 LIVENLS(0.005)S(0.995)R;LIVENLS(0.024)S(0.976)R 126.66 0.0047511 19023700 84488 116051 98554 132062 132385 119788 124078 109909 90644 77339 TRUE FALSE 90956.46624 110288.0761 101839.7412 121272.1122 127186.8997 124346.6163 107786.4096 124274.4837 98528.05127 74815.43476 1.215744673 1.474135336 1.361212984 1.620950443 1.70000883 1.66204496 1.440697496 1.661080819 1.316948188 1 16.19104831 -8.560685495 4.941988498 1.000142568 1.521307471 0.549824175 0.144629276 0.170041804 15.50862241 0.146101288 0.038012559 2.75E-09 8.560685495 0.521164903 LIVNLSQTYMAMY(ph)LT(ph)YSLHLPK ddPTM_A459_MK2206_30min_R2 1 LIVNLSQTYMAMYLTYSLHLPK 22 0 K7EJS5;Q6NUT3-2;Q6NUT3-4;Q6NUT3;Q6NUT3-3 K7EJS5 MFSD12 Major facilitator superfamily domain-containing protein 12 2 LIVNLS(0.003)QT(0.018)Y(0.017)MAMY(0.868)LT(0.403)Y(0.334)S(0.358)LHLPK 47.397 0.043606 0 1083.4 2688.4 1970.8 921.5 1001.8 1246.5 2591.5 852.11 2460.2 2362.1 TRUE FALSE 1166.345937 2554.897965 2036.505488 846.2105023 962.4642984 1293.936431 2251.232937 963.4837027 2674.183749 2285.02487 0.510430303 1.118105102 0.891239966 0.370328793 0.421205174 0.566267986 0.985211569 0.421651298 1.170308378 1 11.15799415 -8.276437778 24.87990222 1.085154264 0.673522635 0.318674773 0.247757824 1125.312646 1866690.809 0.24514963 0.064345051 5.29E-09 8.276437778 -0.411631629 LKATVT(ph)PS(ph)PVKGK ddPTM_A459_MK2206_30min_R1 1 LKATVTPSPVKGK 13 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 LKAT(0.032)VT(0.969)PS(0.999)PVKGK 108.89 0.0092105 0 5040.7 5452.8 5195.2 5092.4 4236.3 3408.8 3418.1 5533.2 3355.8 2024.1 TRUE FALSE 4611.961995 5097.821729 4842.564299 5484.61753 4067.5592 3601.80331 3190.084786 5484.823816 3704.647419 2274.860789 2.027360099 2.240937886 2.128729952 2.410968423 1.788047524 1.583307131 1.402320881 2.411059104 1.628516099 1 11.15156255 -6.40484727 5.420677365 1.681181786 2.197192266 0.39616721 0.341990362 0.26906505 10.92078599 0.106232677 0.120310308 3.94E-07 6.40484727 0.51601048 LKATVTPS(ph)PVK ddPTM_A459_MK2206_30min_R1 2 LKATVTPSPVK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 LKATVT(0.002)PS(0.998)PVK;LKATVT(0.01)PS(0.99)PVK 110.25 0.021574 1254850000 27962 32148 31904 27755 23116.9 21856.1 23926.8 25658.5 23181.8 17600.8 TRUE FALSE 25583.68507 30055.15936 29738.44537 29892.69491 22196.10492 23093.57349 22330.68683 25434.17044 25591.63107 19781.31998 1.293325475 1.519370769 1.503360008 1.511157746 1.122074004 1.167443503 1.128877489 1.285767101 1.293727167 1 14.27185108 -6.260204497 24.99986804 1.17878779 1.464598064 0.671582244 0.099227793 68.73238927 1391469.767 0.030123331 0.036746979 5.49E-07 6.260204497 0.285810274 LKATVTPS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 LKATVTPSPVK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 LKATVT(0.002)PS(0.998)PVK;LKATVT(0.077)PS(0.923)PVK 88.108 0.017109 1839740000 1489530 2070640 2016130 2113110 2135870 1513770 2225890 1557360 1647160 1732760 TRUE FALSE 1603569.562 1967815.029 2083346.768 1940462.153 2052005.012 1571377.578 1933627.969 1760912.299 1790426.999 1676220.183 0.956658068 1.173959751 1.242883715 1.157641563 1.224185839 0.937452963 1.153564424 1.050525651 1.068133541 1 20.67678024 -6.744328995 24.99995186 1.052069945 1.157803976 0.269301133 0.08875571 350.3085357 511834.1678 0.029221353 0.029153413 1.80E-07 6.744328995 0.105734031 LKAY(ph)EYT(ph)TIR ddPTM_A459_MK2206_30min_R1 1 LKAYEYTTIR 10 1 Q8TDN2 Q8TDN2 KCNV2 Potassium voltage-gated channel subfamily V member 2 2 LKAY(1)EY(0.006)T(0.781)T(0.213)IR 72.848 0.032843 0 4595.6 3847.8 3813.7 3578.1 4791.6 4275.2 4378 3864.3 3490.7 3358 TRUE FALSE 4204.720088 3597.307521 3554.83667 3853.685882 4600.740426 4517.258129 4085.951608 3830.514833 3853.570757 3774.014392 1.114124021 0.953178008 0.941924513 1.021110542 1.219057467 1.196937176 1.082653955 1.014970913 1.021080038 1 11.88188421 -4.448092004 21.96946913 1.055785118 3.678565894 0.041758511 0.088306683 1711.602727 527672.2837 0.0242325 10981.71935 3.56E-05 4.448092004 2.622780775 LKDDEVAQLK ddPTM_A459_MK2206_30min_R2 1 LKDDEVAQLK 10 1 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 0 145.46 0.0025372 13113000 160840 149210 142510 139980 124120 98490 150570 136970 106530 165420 FALSE TRUE 173154.0341 141800.4484 147261.2123 128543.1862 119246.4251 102238.106 130799.9781 154872.4493 115795.7868 160022.3589 1.082061502 0.886128972 0.920253977 0.80328266 0.745186022 0.63889888 0.817385639 0.967817562 0.723622546 1 17.28791397 -4.357262482 1.014958154 0.807158515 1.466197638 0.351926235 0.105125122 4.41043284 2.044519439 0.034407537 3.883066771 4.39E-05 4.357262482 0.659039123 LKDDEVAQLKK ddPTM_A459_MK2206_30min_R2 1 LKDDEVAQLKK 11 2 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 0 68.536 0.045465 11592000 54763 72549 73882 56138 74023 41962 79834 55818 50501 59221 FALSE TRUE 58955.69739 68946.32216 76345.18901 51551.34582 71116.48508 43558.89331 69351.6999 63113.60425 54893.4857 57288.62362 1.02909956 1.203490637 1.332641355 0.899853105 1.241371857 0.760341069 1.210566698 1.10167779 0.958191736 1 15.80596106 -5.763228924 24.99998416 1.034581854 1.189918509 0.198294572 0.150014225 78.45525071 1096051.936 0.04016292 0.063202445 1.72E-06 5.763228924 0.155336655 LKDLFDYS(ph)PPLHK ddPTM_A459_MK2206_30min_R1 3 LKDLFDYSPPLHK 13 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 LKDLFDY(0.004)S(0.996)PPLHK;LKDLFDY(0.229)S(0.771)PPLHK;LKDLFDY(0.01)S(0.99)PPLHK 78.191 0.01781 1430225600 36910.7 49216.8 39064.9 36733.6 38104.3 33973.2 36811.4 36957.5 34239.8 32454.2 TRUE FALSE 33771.25114 46012.77737 36413.28343 39562.82824 36586.52504 35896.73322 34355.77867 36634.38447 37799.14974 36474.87131 0.925877184 1.261492521 0.998311498 1.084659844 1.003061114 0.984149688 0.94190267 1.004373234 1.036306596 1 15.15461527 -6.322492034 3.944495244 0.990576386 1.077011911 0.152796423 0.082454589 0.379721895 11.94973417 0.024954363 0.029193381 4.76E-07 6.322492034 0.086435525 LKDLFDYS(ph)PPLHK ddPTM_A459_MK2206_30min_R2 4 LKDLFDYSPPLHK 13 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 LKDLFDY(0.001)S(0.999)PPLHK;LKDLFDYS(1)PPLHK;LKDLFDYS(1)PPLHK;LKDLFDYS(1)PPLHK 103.39 0.0046888 270565000 746602 839805 845650 907960 882589 695575 900931 682744 725999 879295 TRUE FALSE 803762.4232 798101.5049 873843.5489 833776.7636 847934.1212 722045.594 782637.6775 771980.985 789145.0807 850603.6762 0.944931753 0.938276576 1.027321623 0.980217682 0.996861576 0.848862536 0.920096749 0.907568362 0.927747085 1 19.69812756 -6.727457348 24.99999506 0.915030466 0.978257993 0.312185247 0.041602192 206.2458553 151730.9779 0.013486401 0.013485756 1.87E-07 6.727457348 0.063227527 LKDPANFQYPAES(ph)VLAYK ddPTM_A459_MK2206_30min_R2 2 LKDPANFQYPAESVLAYK 18 1 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 1 LKDPANFQY(0.005)PAES(0.994)VLAYK;LKDPANFQYPAES(0.998)VLAY(0.002)K 90.765 0.0030923 4882000 38233 47105 48952 52619 40499 41820 43205 41746 37086 46669 TRUE FALSE 41160.14788 44765.8342 50584.03525 48319.85938 38908.80577 43411.4894 37532.1316 47202.34554 40311.67324 45146.19435 0.911708029 0.991574923 1.120449597 1.07029751 0.861840213 0.961575832 0.831346521 1.045544286 0.892914094 1 15.46231676 -6.251545354 24.95266399 0.930906473 1.028151049 0.248623217 0.077572063 954.7421228 2407851.927 0.023180581 0.029549054 5.60E-07 6.251545354 0.097244576 LKDPANFQYPAESVLAYK ddPTM_A459_MK2206_30min_R1 2 LKDPANFQYPAESVLAYK 18 1 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 ; 106.57 0.0046537 41635000 17214.1 17993.5 18785.2 18655.6 17693.2 17267 18353.1 16673.6 15398.9 15631.8 FALSE TRUE 15749.9504 16822.11988 17510.11296 20092.45754 16988.44238 18244.64262 17128.79819 16527.82447 16999.67076 17568.3854 0.896493903 0.957522248 0.996683108 1.143671265 0.966989396 1.03849285 0.974978508 0.940770828 0.96762852 1 14.10069399 -10.40828733 18.00777852 1 0.990258826 0.001451423 0.062851301 0 0 0.063849229 0.015485713 3.91E-11 10.40828733 -0.009741174 LKDPANFQYPAESVLAYK ddPTM_A459_MK2206_30min_R2 1 LKDPANFQYPAESVLAYK 18 1 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 94.973 0.011594 2395300 59359 66645 62549 69552 69367 59761 70566 56370 55776 61580 FALSE TRUE 63903.57068 63335.50621 64634.35244 63869.37911 66643.30304 62035.24673 61300.59944 63737.75255 60627.29566 59570.64964 1.072735837 1.063199857 1.085003317 1.07216187 1.118727149 1.041372674 1.029040304 1.069952282 1.017737695 1 15.86231407 -8.060017377 0.635765538 1.000934283 1.079393651 0.57891044 0.021614405 0.547009862 0.488224822 0.021793339 0.01045941 8.71E-09 8.060017377 0.078459369 LKDVLLQVDDERR ddPTM_A459_MK2206_30min_R1 2 LKDVLLQVDDERR 13 2 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 ; 96.334 0.0090493 22052400 9673.4 9740.5 9200.6 8969.5 10661.9 9294.8 9458.4 9937.2 6913.6 6694.4 FALSE TRUE 8850.626533 9106.39168 8576.088906 9660.332444 10237.21395 9821.063544 8827.447394 9850.320108 7632.293461 7523.752812 1.176357963 1.210352321 1.13986851 1.283977914 1.360652616 1.30534107 1.173277168 1.30922963 1.014426397 1 12.87723674 -8.272491445 24.35408638 1.007213092 1.245021372 0.668218105 0.06698835 362.1719356 798062.099 0.066971724 0.017985416 5.34E-09 8.272491445 0.237808279 LKDYAFIHFDER ddPTM_A459_MK2206_30min_R1 1 LKDYAFIHFDER 12 1 O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 117.7 0.0037444 6454900 7678.8 7780.6 8224.7 7264.5 8509.7 8198.9 8566.4 7070.6 5566.7 4155.8 FALSE TRUE 7025.677737 7274.081526 7666.430279 7824.013049 8170.740629 8663.114633 7994.951086 7008.78249 6145.378386 4670.651879 1.504217809 1.557401775 1.641404771 1.675143696 1.749379068 1.854797758 1.711742021 1.500600488 1.315743186 1 12.1894082 -8.414750151 1.601152621 1.009227598 1.673676049 0.8316528 0.095767045 0.156241306 0.849974477 0.103645903 0.03051814 3.85E-09 8.414750151 0.664448452 LKDYAFVHFEDR ddPTM_A459_MK2206_30min_R1 1 LKDYAFVHFEDR 12 1 O43390;B4DT28;O43390-4;O43390-3;O43390-2 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R 0 91.202 0.018607 7426300 9484.9 10079 9496.8 9395.7 10884 10077 9768.4 9257.2 8243.3 6795.7 FALSE TRUE 8678.159448 9422.855268 8852.183676 10119.35844 10450.46723 10647.55103 9116.767859 9176.265276 9100.220534 7637.602621 1.136241289 1.23374516 1.159026479 1.324939113 1.368291564 1.39409597 1.193668787 1.201458852 1.191502227 1 12.89890414 -8.744249727 1.052740083 1.001806081 1.263900436 0.473287884 0.080973134 0.81131916 1.753396521 0.085637081 0.027413248 1.80E-09 8.744249727 0.262094354 LKEAFDY(ph)IK ddPTM_A459_MK2206_30min_R1 1 LKEAFDYIK 9 1 Q16690 Q16690 DUSP5 Dual specificity protein phosphatase 5 1 LKEAFDY(1)IK 117.89 0.042238 168560000 2777.3 3047.8 2770.6 2198.3 2663.4 2358.4 2930.3 2983.4 2400.3 2416 TRUE FALSE 2541.076051 2849.387666 2582.539391 2367.613447 2557.311138 2491.93057 2734.825034 2957.316448 2649.819775 2715.31232 0.93583196 1.049377504 0.951102152 0.871948847 0.941811047 0.917732576 1.007186177 1.089125706 0.97588029 1 11.40690243 -7.416076489 5.492558997 1.028668561 0.946622736 0.344900602 0.049441426 0.261963462 11.19731273 0.022302403 0.014754186 3.84E-08 7.416076489 -0.082045825 LKEAFDY(ph)IK ddPTM_A459_MK2206_30min_R2 1 LKEAFDYIK 9 1 Q16690 Q16690 DUSP5 Dual specificity protein phosphatase 5 1 LKEAFDY(1)IK 117.81 0.042381 12364000 25059 28678 27156 33189 28037 28759 26840 22893 28119 30572 TRUE FALSE 26977.53631 27253.89222 28061.36749 30477.35253 26936.12651 29853.4439 23315.87576 25885.1937 30564.73979 29574.43814 0.912191 0.921535418 0.948838566 1.03053023 0.910790811 1.009434017 0.788379331 0.875255637 1.033485054 1 14.85206314 LKEDILENEDEQNS(ph)PPK ddPTM_A459_MK2206_30min_R1 4 LKEDILENEDEQNSPPK 17 1 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK 162.32 9.10E-06 94632000 29763.3 37767.3 38365.9 32452.4 20133.4 18267.7 23439.3 22806.5 33976.6 30050.1 TRUE FALSE 27231.77504 35308.64191 35761.7296 34951.88947 19331.44404 19302.00139 21875.70706 22607.10517 37508.58916 33772.93325 0.806319511 1.04547158 1.058887285 1.034908316 0.572394583 0.5715228 0.647728964 0.669385303 1.11061094 1 15.04357987 -6.244603576 24.79714346 0.730178239 0.995794231 0.262342221 0.179436033 893.217791 1315603.516 0.053709591 0.069147617 5.69E-07 6.244603576 0.265615992 LKEDILENEDEQNS(ph)PPK ddPTM_A459_MK2206_30min_R2 6 LKEDILENEDEQNSPPK 17 1 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK 132.65 0.00037995 90535700 623580 524178 542936 451975 446244 315300 647350 436647 338576 622821 TRUE FALSE 671321.7643 498148.0827 561037.2153 415047.1967 428722.2184 327298.9624 562352.1674 493718.2621 368024.7285 602498.4018 1.11422995 0.82680399 0.93118457 0.688876843 0.711574034 0.543236233 0.933367069 0.819451571 0.610831045 1 19.20059789 -3.58925939 0.940159026 0.755644116 3.758536022 0.343943171 0.138760862 17.77940353 2.167778385 0.04477387 90.75269889 0.000257478 3.58925939 3.002891905 LKEDILENEDEQNS(ph)PPKK ddPTM_A459_MK2206_30min_R1 1 LKEDILENEDEQNSPPKK 18 2 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LKEDILENEDEQNS(1)PPKK 103.13 0.0024096 10335000 3026.2 3231.5 3259.7 3246.3 1743.5 1711.4 2206 2138.3 2897.8 2456.4 TRUE FALSE 2768.805799 3021.128763 3038.440646 3496.330588 1674.052703 1808.297989 2058.841765 2119.605069 3199.03668 2760.717377 1.002929826 1.094327434 1.100598225 1.266457269 0.606383224 0.655010181 0.745763323 0.767773292 1.158770074 1 11.43082749 -6.257107858 24.99953517 0.798482354 1.11341885 0.432077006 0.163640698 351.7482173 2030125.714 0.050312607 0.062700308 5.53E-07 6.257107858 0.314936496 LKEDILENEDEQNS(ph)PPKK ddPTM_A459_MK2206_30min_R2 2 LKEDILENEDEQNSPPKK 18 2 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LKEDILENEDEQNS(1)PPKK;LKEDILENEDEQNS(1)PPKK 89.866 0.0023337 40013000 243460 227940 199870 182372 189982 126507 284180 182237 154688 239690 TRUE FALSE 262099.4848 216620.8311 206533.566 167471.6242 182522.3521 131321.3125 246866.8246 206056.0016 168142.4826 231868.9349 1.130377749 0.934238263 0.890734096 0.722268484 0.787178982 0.566360097 1.064682618 0.888674465 0.72516175 1 17.82295002 -4.786463782 1.585681478 0.817670515 1.242328639 0.314791148 0.135853976 1.266703697 3.077024746 0.038710895 0.841745974 1.64E-05 4.786463782 0.424658125 LKEPGPPLASSQGGS(ph)PAPSPAGCGGK ddPTM_A459_MK2206_30min_R2 1 LKEPGPPLASSQGGSPAPSPAGCGGK 26 1 J3QQY0;J3KSZ8;Q68DK7 J3QQY0 MSL1 Male-specific lethal 1 homolog 1 LKEPGPPLAS(0.005)S(0.027)QGGS(0.961)PAPS(0.007)PAGCGGK 72.935 0.00022232 4357000 13707 19611 14723 17145 21617 18828 22368 15202 16243 17937 TRUE FALSE 14756.41846 18637.14626 15213.85747 15744.19866 20768.20796 19544.51273 19431.05473 17188.9536 17655.78678 17351.71716 0.850429864 1.074080801 0.876792616 0.907356806 1.196896409 1.126373405 1.119834686 0.990619743 1.017523892 1 14.08279082 -6.236014048 24.94901568 1.079528623 0.934060961 0.44111373 0.081400793 756.9624359 742781.6051 0.024710142 0.031888887 5.81E-07 6.236014048 -0.145467662 LKETCVSGEDPT(ph)QGADLSPDEK ddPTM_A459_MK2206_30min_R2 1 LKETCVSGEDPTQGADLSPDEK 22 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 LKETCVSGEDPT(0.996)QGADLS(0.004)PDEK 119.62 4.56E-05 3135000 16627 18751 17720 17667 17577 11661 17511 15101 14512 19338 TRUE FALSE 17899.9759 17819.85261 18310.77596 16223.54959 16886.83866 12104.76753 15211.78467 17074.75255 15774.22753 18707.00264 0.956859645 0.95257658 0.978819339 0.867244737 0.902701463 0.647071461 0.813159914 0.912746573 0.843225814 1 14.1912908 -5.953356678 2.302858636 0.83660885 0.96246375 0.230674043 0.086212794 0.406737579 4.360555407 0.027310258 0.043674294 1.11E-06 5.953356678 0.1258549 LKETCVSGEDPTQGADLS(ph)PDEK ddPTM_A459_MK2206_30min_R1 4 LKETCVSGEDPTQGADLSPDEK 22 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPT(0.004)QGADLS(0.996)PDEK 167.74 5.43E-12 62831000 22442.2 25619.8 26655.9 21953 16113.8 15295.1 19268.4 19171.7 20983.8 20656.1 TRUE FALSE 20533.37304 23951.94636 24846.57178 23643.82386 15471.95322 16161.09534 17983.04019 19004.08385 23165.1411 23215.13361 0.884482225 1.031738467 1.070274769 1.018465982 0.666459797 0.696144834 0.774625746 0.818607559 0.997846555 1 14.50277796 -6.233368862 24.09847173 0.807521577 1.008349887 0.362077753 0.112519796 472.673734 405788.77 0.034192909 0.044131113 5.84E-07 6.233368862 0.20082831 LKETCVSGEDPTQGADLS(ph)PDEK ddPTM_A459_MK2206_30min_R2 4 LKETCVSGEDPTQGADLSPDEK 22 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK 186.54 7.64E-22 62929700 385257 352783 360903 300262 347596 227159 405416 274834 265963 403968 TRUE FALSE 414752.5721 335264.3092 372935.3259 275729.6341 333947.6345 235803.6949 352184.3922 310755.7474 289095.981 390786.5572 1.061327634 0.857921807 0.95431974 0.705576047 0.854552513 0.603407898 0.901219312 0.795205827 0.739779748 1 18.57602131 -4.133784485 0.89997616 0.795083389 1.620679777 0.299285177 0.111522653 6.977217565 1.936917603 0.035658874 7.4784902 7.35E-05 4.133784485 0.825596388 LKFS(ph)DDEEEEEVVK ddPTM_A459_MK2206_30min_R1 5 LKFSDDEEEEEVVK 14 1 Q5JSZ5;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK 101.54 0.0045188 83029000 23032.68 31108.8 30428.9 24124.78 16493.65 16187.63 20390.16 19826.66 30558.26 31569.24 TRUE FALSE 21073.62962 29083.61147 28363.47105 25982.87474 15836.67299 17104.15962 19029.96963 19653.3176 33734.90048 35480.27579 0.593953377 0.819712103 0.79941518 0.732318849 0.446351463 0.48207516 0.536353487 0.553922346 0.950807166 1 15.1147296 -8.293514219 8.068063489 0.978354675 0.623631398 0.577843227 0.121316786 0.268222026 59.17889997 0.130091277 0.035069095 5.09E-09 8.293514219 -0.354723277 LKFS(ph)DDEEEEEVVK ddPTM_A459_MK2206_30min_R2 4 LKFSDDEEEEEVVK 14 1 Q5JSZ5;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK 130.64 0.00052505 33027800 137486 123036 124595 107107 96844 73289 137046 107974 89474 148803 TRUE FALSE 148012.0339 116926.2112 128748.9351 98356.01548 93041.41796 76078.06425 119051.6956 122086.5725 97256.28679 143947.5703 1.028235722 0.812283326 0.89441548 0.683276663 0.646356293 0.528512319 0.827049011 0.848132221 0.675636877 1 17.13518391 -4.562746842 1.092807776 0.736247256 1.264331339 0.273421575 0.129354465 3.325097216 2.401929534 0.041106546 2.275248024 2.74E-05 4.562746842 0.528084083 LKGSSHS(ph)PDHPGCLMEN ddPTM_A459_MK2206_30min_R2 2 LKGSSHSPDHPGCLMEN 17 1 O95149 O95149 SNUPN Snurportin-1 1 LKGS(0.027)S(0.027)HS(0.945)PDHPGCLMEN;LKGS(0.04)S(0.04)HS(0.921)PDHPGCLMEN 70.99 0.016896 12492900 37480 86985 62578 103225 117187 112240 112055 66927 96357 82492 TRUE FALSE 40349.49762 82665.45139 64664.31929 94791.1873 112585.6496 116511.3719 97342.0439 75674.58869 104737.9577 79800.2928 0.505630947 1.035904111 0.810326842 1.187855132 1.410842562 1.460036897 1.219820636 0.948299637 1.31250092 1 16.28410642 -4.589661278 0.878505241 1.227575037 1.19E-11 0.55482099 0.184736674 2.422805056 1.163125273 0.068905 3.104280074 2.57E-05 4.589661278 -1.227575037 LKLS(ph)PSPSSR ddPTM_A459_MK2206_30min_R2 1 LKLSPSPSSR 10 1 Q03252;P20700 Q03252;P20700 LMNB2;LMNB1 Lamin-B2;Lamin-B1 1 LKLS(0.983)PS(0.012)PS(0.004)SR 68.463 0.043898 587530000 397540 450230 450180 405540 385950 403850 445110 345290 344840 480160 TRUE FALSE 427975.9681 427872.2329 465188.7765 372406.0847 370795.6638 419218.7947 386666.5223 390420.5886 374833.5599 464492.4185 0.921384184 0.921160854 1.001499181 0.801748468 0.798281412 0.902530974 0.832449588 0.840531671 0.806974549 1 18.82529552 -5.765401147 24.99999039 0.846722651 0.945329352 0.324725119 0.060919836 104.469752 659242.4125 0.016179463 0.025038015 1.72E-06 5.765401147 0.098606701 LKNDMAVPT(ph)PPPPPVPPTK ddPTM_A459_MK2206_30min_R2 1 LKNDMAVPTPPPPPVPPTK 19 1 G3V1P5;Q96RN5-3;Q96RN5-2;Q96RN5 G3V1P5 MED15 Mediator of RNA polymerase II transcription subunit 15 1 LKNDMAVPT(1)PPPPPVPPTK 70.783 0.024185 5665200 26049 27243 26505 28806 20907 21146 32973 20327 14587 25164 TRUE FALSE 28043.33147 25890.15224 27388.66347 26452.45765 20086.08613 21950.72585 28643.60549 22983.80869 15855.75089 24342.90074 1.152012727 1.063560687 1.125119137 1.086660047 0.825131168 0.901730081 1.176671827 0.944168854 0.651350103 1 14.57121347 -6.142393004 6.730739909 0.92634579 1.107792625 0.352557959 0.126175282 0.32157469 16.54782183 0.038950111 0.050532649 7.20E-07 6.142393004 0.181446835 LKNGFPHPEPDCNPSEAASEESNS(ph)EIEQEIPVEQK ddPTM_A459_MK2206_30min_R1 2 LKNGFPHPEPDCNPSEAASEESNSEIEQEIPVEQK 35 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 LKNGFPHPEPDCNPS(0.035)EAAS(0.035)EES(0.194)NS(0.737)EIEQEIPVEQK;LKNGFPHPEPDCNPS(0.006)EAAS(0.028)EES(0.444)NS(0.522)EIEQEIPVEQK 68.368 2.84E-05 23543000 3934.2 4431.4 4551.9 4492.5 4313.5 3372.4 3362.4 4515.6 2799.2 2225.7 TRUE FALSE 3599.575631 4142.915055 4242.92971 4838.513128 4141.684161 3563.342374 3138.100431 4476.120585 3090.186857 2501.436519 1.43900339 1.656214348 1.696197236 1.934293791 1.655722274 1.42451841 1.254519316 1.78942002 1.235364893 1 11.28854113 -6.76873363 4.419738713 1.380690348 1.693461786 0.367085006 0.217655626 0.24834135 11.62000188 0.075938821 0.07058052 1.70E-07 6.76873363 0.312771438 LKPGGVGAPSS(ph)SSPSPSPSARPGPPPSEEAMDFR ddPTM_A459_MK2206_30min_R2 1 LKPGGVGAPSSSSPSPSPSARPGPPPSEEAMDFR 34 2 Q92797 Q92797 SYMPK Symplekin 1 LKPGGVGAPS(0.04)S(0.292)S(0.292)S(0.259)PS(0.036)PS(0.036)PS(0.032)ARPGPPPS(0.014)EEAMDFR 51.025 0.0028456 10573000 6573.8 8219.8 7884.2 8995.7 8456.8 8814.2 9314 5453.1 9980.1 9510.4 TRUE FALSE 7077.095182 7811.616685 8147.055293 8260.722534 8124.74354 9149.630557 8091.060612 6165.838893 10848.15106 9200.076427 0.769243086 0.849081717 0.885542132 0.897897164 0.883116962 0.994516799 0.879455804 0.670194312 1.179137059 1 13.16743013 -1.522878745 0.090986931 1.075974221 0.350370851 0.189793448 0.117452204 308.0751954 2.020552612 2.080304202 27.89098973 0.03 1.522878745 -0.72560337 LKPGGVGAPSSSSPS(ph)PSPSAR ddPTM_A459_MK2206_30min_R1 2 LKPGGVGAPSSSSPSPSPSAR 21 1 Q92797 Q92797 SYMPK Symplekin 1 LKPGGVGAPS(0.002)S(0.022)S(0.431)S(0.041)PS(0.437)PS(0.023)PS(0.043)AR;LKPGGVGAPSSS(0.003)S(0.005)PS(0.682)PS(0.201)PS(0.108)AR 190.33 8.44E-17 230660000 11097.1 10398.4 11267.5 8337.9 9549.2 11344.7 14379.9 10198.8 12916.9 15126.4 TRUE FALSE 10153.23337 9721.46227 10502.69349 8980.086503 9168.835143 11987.02711 13420.64311 10109.63297 14259.65798 17000.37263 0.597235931 0.571838187 0.617791958 0.528228804 0.539331422 0.705103786 0.789432291 0.594671257 0.838785025 1 14.05327875 -8.59136849 0.422407398 1.02446789 0.559541372 0.772348221 0.069587096 0.671182333 0.300327499 0.108184452 0.052938506 2.56E-09 8.59136849 -0.464926519 LKPGGVGAPSSSSPS(ph)PSPSARPGPPPSEEAMDFR ddPTM_A459_MK2206_30min_R1 2 LKPGGVGAPSSSSPSPSPSARPGPPPSEEAMDFR 34 2 Q92797 Q92797 SYMPK Symplekin 1 LKPGGVGAPSS(0.001)S(0.002)S(0.007)PS(0.4)PS(0.127)PS(0.4)ARPGPPPS(0.063)EEAMDFR;LKPGGVGAPS(0.006)S(0.006)S(0.013)S(0.03)PS(0.628)PS(0.201)PS(0.067)ARPGPPPS(0.048)EEAMDFR 59.991 0.00021354 26730000 3569.3 2912.2 3508.8 2625.9 3660.2 2912.4 3125.8 3429.4 3270.72 2716.3 TRUE FALSE 3265.712292 2722.615251 3270.632432 2828.147273 3514.406483 3077.297571 2917.283585 3399.417117 3610.723048 3052.815751 1.069737763 0.891837396 1.071349436 0.926406146 1.151201635 1.008019423 0.95560421 1.113534977 1.18275171 1 11.5759248 -6.818415019 0.653839604 1.085218973 0.989750641 0.095956273 0.087418959 1.706618079 1.587517101 0.068635446 0.069035321 1.52E-07 6.818415019 -0.095468332 LKPGGVGAPSSSSPSPS(ph)PSAR ddPTM_A459_MK2206_30min_R2 2 LKPGGVGAPSSSSPSPSPSAR 21 1 Q92797 Q92797 SYMPK Symplekin 1 LKPGGVGAPSSSSPS(0.133)PS(0.792)PS(0.075)AR;LKPGGVGAPSSS(0.006)S(0.01)PS(0.145)PS(0.419)PS(0.419)AR 171.87 8.08E-11 63847000 85032 91998 82115 88819 74437 83984 98655 73232 70937 97432 TRUE FALSE 91542.1153 87429.5131 84852.67312 81562.20358 71514.22936 87180.06997 85701.47999 82803.67384 77106.97204 94252.80182 0.971240255 0.927606516 0.900266851 0.865355745 0.758749109 0.924959983 0.909272492 0.878527452 0.818086789 1 16.52424789 -5.116151256 1.84136706 0.873306448 0.972557268 0.18032088 0.06050241 0.749547257 4.068432046 0.016880463 0.102022898 7.65E-06 5.116151256 0.099250819 LKS(ph)EDGVEGDLGETQSR ddPTM_A459_MK2206_30min_R1 8 LKSEDGVEGDLGETQSR 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(0.5)EDGVEGDLGET(0.5)QSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(0.991)EDGVEGDLGET(0.009)QSR;LKS(1)EDGVEGDLGETQSR 233.38 4.78E-16 1130351000 17641 18592.6 16614.59 13345.66 11086.02 8165.24 9792.06 12089.3 10928.16 9299.73 TRUE FALSE 16140.54031 17382.21836 15486.83792 14373.54505 10644.44035 8627.548833 9138.849544 11983.60452 12064.18134 10451.85076 1.544275811 1.663075637 1.481731635 1.375215297 1.018426362 0.825456565 0.874376199 1.146553352 1.154262686 1 13.35147081 -6.073300203 2.200515135 0.99121996 1.579812661 0.858428985 0.104175166 0.120693352 1.157167082 0.037947696 0.055862206 8.45E-07 6.073300203 0.588592701 LKS(ph)EDGVEGDLGETQSR ddPTM_A459_MK2206_30min_R2 11 LKSEDGVEGDLGETQSR 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(0.991)EDGVEGDLGET(0.009)QSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR 174.87 8.50E-07 2440553000 769905 694009 645096 609416 569793 386520 586040 414873.5 392192.8 521262 TRUE FALSE 828849.5188 659545.5222 666603.1787 559624.7634 547420.0638 401229.2894 509092.244 469098.8909 426305.0208 504253.2636 1.643716716 1.307964806 1.32196106 1.109808907 1.085605396 0.79569002 1.009596329 0.930284293 0.845418466 1 18.94378899 -4.986878495 0.586443455 0.902418592 1.944693959 0.872289342 0.086994247 0.992366615 0.30648116 0.046258302 0.679556207 1.03E-05 4.986878495 1.042275367 LKS(ph)PQAVLQLGVNNEDSK ddPTM_A459_MK2206_30min_R2 2 LKSPQAVLQLGVNNEDSK 18 1 D6RJ90;Q9Y6G5 D6RJ90 COMMD10 COMM domain-containing protein 10 1 LKS(1)PQAVLQLGVNNEDSK;LKS(1)PQAVLQLGVNNEDSK 93.388 0.0025478 9563200 58803 60625 60754 58477 60609 42671 72487 59278 43537 67113 TRUE FALSE 63305.00289 57614.45066 62779.50804 53699.24204 58229.18612 44294.87481 62969.36983 67025.83813 47323.76956 64923.10831 0.975076587 0.887425944 0.966982476 0.827120627 0.896894613 0.682266699 0.969906886 1.032388003 0.728920269 1 15.98644445 -10.67710438 17.98635371 1 0.88717443 0.094897334 0.106188661 0 0 0.101180531 0.024539883 2.10E-11 10.67710438 -0.11282557 LKS(ph)PSMAVPSPGWVASPK ddPTM_A459_MK2206_30min_R1 1 LKSPSMAVPSPGWVASPK 18 1 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 LKS(0.742)PS(0.238)MAVPS(0.02)PGWVASPK 77.505 0.0075402 31694000 3110.4 2803.8 3284.9 3060.3 2703.4 2698.1 2735.1 3129.4 2657.7 2026.9 TRUE FALSE 2845.844147 2621.27211 3061.93014 3296.004836 2595.717853 2850.86409 2552.646469 3102.039986 2933.977426 2278.007674 1.249268902 1.150686251 1.34412635 1.44688048 1.139468441 1.251472558 1.120560961 1.361733773 1.287957656 1 11.15355689 LKS(ph)PSMAVPSPGWVASPK ddPTM_A459_MK2206_30min_R2 2 LKSPSMAVPSPGWVASPK 18 1 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 LKS(0.826)PS(0.173)MAVPSPGWVASPK;LKS(0.981)PS(0.019)MAVPSPGWVASPK 135.64 0.00019688 42429000 151937 181293 177351 208227 199154 176067 221460 160708 170163 199952 TRUE FALSE 163569.4135 172290.2532 183263.7938 191214.188 191334.2133 182767.3531 192382.036 181713.0874 184963.4702 193427.5826 0.845636446 0.890722259 0.947454294 0.988556986 0.989177504 0.944887749 0.994594635 0.939437307 0.95624144 1 17.56143401 -5.142363875 1.997401672 0.971171629 0.843850552 0.815119195 0.020212546 0.165883191 1.120747225 0.005638163 0.029314076 7.21E-06 5.142363875 -0.127321077 LKS(ph)PSQKQDGGTAPVASASPK ddPTM_A459_MK2206_30min_R1 1 LKSPSQKQDGGTAPVASASPK 21 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LKS(0.953)PS(0.047)QKQDGGTAPVASASPK 85.376 0.0012513 7945700 2069.8 2123.9 2372.2 2484.3 2435.1 1509.5 1540.3 2571.7 1412.6 815.05 TRUE FALSE 1893.752641 1985.633724 2211.181673 2675.641216 2338.104811 1594.966586 1437.549397 2549.215898 1559.444825 916.0245473 2.067360145 2.167664316 2.413889104 2.920927419 2.552447767 1.741183236 1.569335016 2.782912211 1.702405061 1 9.839242449 -6.761301854 24.99999968 1.858734566 2.437185992 0.327291987 0.465916932 5.286768839 961097.347 0.161382728 0.151734866 1.73E-07 6.761301854 0.578451426 LKSEDGVEGDLGET(ph)QSR ddPTM_A459_MK2206_30min_R1 1 LKSEDGVEGDLGETQSR 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LKS(0.403)EDGVEGDLGET(0.597)QSR 137.4 0.0053016 12597000 4047.6 4121.7 3720.3 2644.1 2150.8 1788.6 2236.6 2692.7 2377.9 2287.7 TRUE FALSE 3703.330365 3853.376581 3467.776401 2847.74904 2065.129082 1889.868986 2087.400495 2669.158008 2625.091214 2571.117547 1.440358248 1.498716613 1.348742847 1.107591928 0.803202904 0.735037956 0.811865057 1.038131458 1.020992299 1 11.32817985 -5.844507884 2.338603289 0.892031979 1.461181125 0.852954678 0.098312966 0.11243876 1.252588147 0.033481511 0.05818924 1.43E-06 5.844507884 0.569149146 LKSEDGVEGDLGET(ph)QSR ddPTM_A459_MK2206_30min_R2 1 LKSEDGVEGDLGETQSR 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LKS(0.409)EDGVEGDLGET(0.591)QS(0.001)R 168.16 1.25E-05 122270000 44674 35505 33346 26897 26884 14051 27501 20424 16721 18456 TRUE FALSE 48094.27579 33741.87333 34457.739 24699.42906 25828.39908 14585.72065 23890.08567 23093.48693 18175.36236 17853.78223 2.693786401 1.889900576 1.9299966 1.383428382 1.446662603 0.816954103 1.33809662 1.293478694 1.018011877 1 14.12394211 -1.522878745 0.403933077 1.059997279 28.19223729 0.87192907 0.189116915 24.19355928 0.318888261 0.133757047 524.0076 0.03 1.522878745 27.13224002 up LKSPVLSNTTTEPAS(ph)TMSPPPAK ddPTM_A459_MK2206_30min_R2 2 LKSPVLSNTTTEPASTMSPPPAK 23 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKSPVLSNTTTEPAS(0.432)T(0.432)MS(0.136)PPPAK;LKSPVLSNTTTEPAS(0.333)T(0.333)MS(0.333)PPPAK 107.09 3.64E-05 10366000 41646 49546 47109 52755 47121 47574 51147 44332 44582 47191 TRUE FALSE 44834.44978 47085.61769 48679.59055 48444.74775 45270.79278 49384.46191 44431.33746 50126.34461 48459.66177 45651.16153 0.982109727 1.031422117 1.066338488 1.061194198 0.991667928 1.081778869 0.973279452 1.098029994 1.061520893 1 15.47836395 -4.790747965 3.858028096 1.043422969 0.97677196 0.17171782 0.038883974 0.395705389 10.62913451 0.009313574 0.073244466 1.62E-05 4.790747965 -0.066651008 LKSPVLSNTTTEPAST(ph)MSPPPAK ddPTM_A459_MK2206_30min_R1 1 LKSPVLSNTTTEPASTMSPPPAK 23 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKSPVLSNTTTEPAS(0.033)T(0.838)MS(0.13)PPPAK 121.46 1.46E-05 25325000 4933.3 4826.6 4724.7 4076.5 4562.9 4804.4 4673.1 4747.5 4414.2 4061.7 TRUE FALSE 4513.696929 4512.387463 4404.000528 4390.472736 4381.150031 5076.420976 4361.366026 4705.993108 4873.071886 4564.89406 0.988784596 0.98849774 0.964754159 0.961790718 0.959748457 1.112056689 0.955414511 1.0309096 1.0675104 1 12.15636566 LKSPVLSNTTTEPAST(ph)MSPPPAKK ddPTM_A459_MK2206_30min_R2 2 LKSPVLSNTTTEPASTMSPPPAKK 24 2 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKSPVLSNTT(0.001)T(0.001)EPAS(0.048)T(0.474)MS(0.474)PPPAKK;LKSPVLSNTTTEPAS(0.131)T(0.434)MS(0.434)PPPAKK 94.671 1.60E-05 15671600 60689 84913 76067 88138 89164 73558 87434 73244 85094 90235 TRUE FALSE 65335.3965 80696.3439 78603.03581 80936.84346 85662.97335 76357.30123 75953.81077 82817.24228 92495.32231 87290.63934 0.748481131 0.92445587 0.90047497 0.927211028 0.981353488 0.874747875 0.870125495 0.948752843 1.059624755 1 16.41353933 -4.105513508 1.424532521 0.941109605 4.39E-14 0.525124081 0.055459198 6.267286266 2.871828926 0.016230939 13.51644369 7.84E-05 4.105513508 -0.941109605 LKSPVLSNTTTEPASTMS(ph)PPPAK ddPTM_A459_MK2206_30min_R1 1 LKSPVLSNTTTEPASTMSPPPAK 23 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKSPVLSNTTTEPAS(0.264)T(0.254)MS(0.482)PPPAK 119.6 5.85E-06 22587000 4834.7 4959.3 4860.8 4205.7 4667.3 4040.5 3994.3 4963.4 4441.3 3212.1 TRUE FALSE 4423.483377 4636.448669 4530.862439 4529.623743 4481.391558 4269.269618 3727.847535 4920.005517 4902.989028 3610.039198 1.225328351 1.284320866 1.25507292 1.254729795 1.241369224 1.182610322 1.032633534 1.362867616 1.358153959 1 11.81779879 -6.61262963 5.10886364 1.200544082 1.255995409 0.07431587 0.11031317 0.764144952 33.3744721 0.038030736 0.038033145 2.44E-07 6.61262963 0.055451327 LKSPVLSNTTTEPASTMS(ph)PPPAK ddPTM_A459_MK2206_30min_R2 2 LKSPVLSNTTTEPASTMSPPPAK 23 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKSPVLSNTTTEPAS(0.004)T(0.024)MS(0.972)PPPAK;LKSPVLSNTTTEPAS(0.003)T(0.037)MS(0.96)PPPAK 145.6 8.36E-08 34437000 192647 210433 190762 217651 227836 192128 234940 193174 174043 227010 TRUE FALSE 207396.2024 199983.2032 197121.9099 199868.2171 218890.0139 199439.5657 204092.0958 218422.5051 189180.9455 219602.6823 0.944415616 0.910659201 0.897629791 0.910135591 0.996754737 0.908183651 0.929369777 0.994625852 0.861469193 1 17.74453615 LKT(ph)PSTPVACSTPAQLK ddPTM_A459_MK2206_30min_R2 1 LKTPSTPVACSTPAQLK 17 1 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 LKT(0.85)PS(0.038)T(0.112)PVACSTPAQLK 72.187 0.038735 12652000 37560 45744 40310 50991 53407 48145 52734 39318 47039 47909 TRUE FALSE 40435.62248 43472.41948 41653.91528 46824.87219 51309.97283 49977.19171 45809.96246 44456.9976 51130.36719 46345.73325 0.87247778 0.938002626 0.898764835 1.010338361 1.107113195 1.078355831 0.988439695 0.959246828 1.103237852 1 15.50014891 -5.831563657 4.523066374 1.038337884 0.906112156 0.616357145 0.048110475 0.146371712 5.719829992 0.014385414 0.022381381 1.47E-06 5.831563657 -0.132225727 LKTEEGEIDYS(ph)AEEGENR ddPTM_A459_MK2206_30min_R1 1 LKTEEGEIDYSAEEGENR 18 1 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9;C9IYN3;Q8WVV9-3;Q8WVV9-4 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 LKTEEGEIDYS(1)AEEGENR 86.439 0.0039906 6200900 3039.5 3117.9 2847.2 2367.4 2966.9 2553.3 2752.6 2380.3 3165.2 2994.7 TRUE FALSE 2780.974564 2914.924143 2653.939997 2549.737558 2848.72209 2697.865639 2568.979076 2359.489288 3494.233867 3365.706045 0.82626781 0.86606617 0.788524001 0.757563948 0.846396581 0.801574946 0.763280881 0.701038432 1.038187477 1 11.71669346 -8.273719061 24.98077448 1.019093794 0.795851494 0.796433902 0.045543342 380.4387868 773925.0725 0.045024696 0.011963845 5.32E-09 8.273719061 -0.2232423 LKTEEGEIDYS(ph)AEEGENRR ddPTM_A459_MK2206_30min_R1 1 LKTEEGEIDYSAEEGENRR 19 2 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9;C9IYN3;Q8WVV9-3;Q8WVV9-4 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 LKTEEGEIDYS(1)AEEGENRR 81.224 0.0066192 26157000 2367.4 2620.4 3076.9 2344.2 3204.4 2678 2767.3 3249.2 2359.7 2138.9 TRUE FALSE 2166.040198 2449.811484 2868.048601 2524.75069 3076.761963 2829.626046 2582.698466 3220.792587 2604.999259 2403.88308 0.901058881 1.019105923 1.193089891 1.050280154 1.279913315 1.177106353 1.074386058 1.339829135 1.083663045 1 11.23115101 -4.973581211 2.176294598 1.162581991 0.87767 0.382015772 0.100245448 0.408299334 3.010099693 0.0255064 0.195791824 1.06E-05 4.973581211 -0.284911991 LKTPS(ph)TPVACSTPAQLK ddPTM_A459_MK2206_30min_R1 1 LKTPSTPVACSTPAQLK 17 1 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 LKT(0.14)PS(0.486)T(0.373)PVACSTPAQLK 64.87 0.024605 9790400 3975 3827.4 3422.8 3211.6 3384.3 3072.1 3034.1 3560.9 2638.3 1953.6 TRUE FALSE 3636.905376 3578.235564 3190.469872 3458.957988 3249.496165 3246.039647 2831.700725 3529.767427 2912.560726 2195.626717 1.656431555 1.62971034 1.453102136 1.57538527 1.47998571 1.478411436 1.289700432 1.607635487 1.326528186 1 11.10041708 -12.71898421 0.140395767 1.61E-15 1.712642919 0.764430147 0.092171078 36.7931212 0.51306643 11.61440031 0.620091383 1.91E-13 12.71898421 1.712642919 LKTPST(ph)PVACSTPAQLK ddPTM_A459_MK2206_30min_R2 1 LKTPSTPVACSTPAQLK 17 1 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 LKT(0.24)PS(0.153)T(0.606)PVACSTPAQLK 81.346 0.021569 8734800 46348 67219 56195 65780 77172 66794 76464 46227 57071 59985 TRUE FALSE 49896.43852 63881.00221 58068.51325 60405.56358 74141.83952 69335.89247 66424.18495 52269.02762 62034.93242 58027.69436 0.859872843 1.100870936 1.000703438 1.040978179 1.277697491 1.194875882 1.144697987 0.900760028 1.069057337 1 15.82445399 -1.598861407 18.91335818 1.067475731 0.00529268 0 0.12170116 0 0 0.029166672 0 0.025184805 1.598861407 -1.062183051 LKVPEWVDTVK ddPTM_A459_MK2206_30min_R1 1 LKVPEWVDTVK 11 1 P39019;M0R2L9;M0QYF7;M0R140 P39019 RPS19 40S ribosomal protein S19 0 152.47 0.0016281 8635000 5674.6 5996.6 5885.1 5524.7 5773.9 5042.2 5079.5 5893 4703 4528.6 FALSE TRUE 5191.945471 5606.22025 5485.635809 5950.213351 5543.913337 5327.685007 4740.655823 5841.478122 5191.89368 5089.637157 1.020101298 1.101497037 1.077804889 1.169083997 1.089255121 1.046771084 0.931432964 1.147719954 1.020091122 1 12.31334709 -6.797608525 4.682415175 1.031274896 1.095971339 0.212805109 0.060160298 0.333236502 16.67105154 0.021443421 0.019452166 1.59E-07 6.797608525 0.064696443 LLAQAEGEPCY(ph)IR ddPTM_A459_MK2206_30min_R1 2 LLAQAEGEPCYIR 13 0 H0YE41;E9PPF2;E9PM19;P29597 H0YE41 TYK2 Tyrosine-protein kinase;Non-receptor tyrosine-protein kinase TYK2 1 LLAQAEGEPCY(1)IR;LLAQAEGEPCY(1)IR 167.2 0.0043662 18431800 4211.8 4217.8 3734.2 3514.8 3264.3 3513.9 4180.6 3134.3 5248.7 4039 TRUE FALSE 3853.564293 3943.220453 3480.732908 3785.510505 3134.276019 3712.853981 3901.719802 3106.897146 5794.321148 4539.381813 0.8489183 0.868669043 0.766785666 0.833926438 0.690463184 0.817920619 0.859526685 0.684431774 1.276455999 1 12.14828012 -8.258946011 24.99998555 1.138228009 0.798307223 0.709087035 0.087589426 103.3486187 1036262.423 0.061710883 0.020822743 5.51E-09 8.258946011 -0.339920786 LLAS(ph)PSSR ddPTM_A459_MK2206_30min_R1 3 LLASPSSR 8 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 LLAS(0.923)PS(0.071)S(0.006)R;LLAS(0.778)PS(0.222)SR;LLAS(0.993)PS(0.007)S(0.001)R 128.6 0.0042872 80357000 14681.6 13739 13202.8 11358.8 14416.1 12944 14337.1 12275.1 10938 10355 TRUE FALSE 13432.85282 12844.5886 12306.63072 12233.65674 13841.87621 13676.87809 13380.69822 12167.78009 12075.04424 11637.85558 1.154237801 1.103690325 1.057465496 1.051195099 1.189383742 1.175206034 1.149756339 1.04553455 1.037566084 1 13.50653763 -7.872946128 5.038586673 1.026095821 1.123659044 0.511866846 0.044188956 0.206635905 8.174728766 0.028586344 0.013315825 1.34E-08 7.872946128 0.097563223 LLAS(ph)PSSR ddPTM_A459_MK2206_30min_R2 3 LLASPSSR 8 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 LLAS(0.751)PS(0.245)S(0.004)R;LLAS(0.912)PS(0.087)S(0.001)R;LLAS(0.94)PS(0.059)S(0.001)R 105.1 0.014297 64627700 197740 202669 187320 203345 213064 223191 226317 161732 175792 217018 TRUE FALSE 212879.1264 192604.7522 193565.1553 186731.063 204698.0368 231684.6899 196601.306 182870.9277 191082.0704 209936.7204 1.014015681 0.91744194 0.922016667 0.889463561 0.975046368 1.103592975 0.936478886 0.871076424 0.910188889 1 17.67959501 -12.24210479 2.094992925 2.669814625 0.9480318 0.053266178 0.064663276 5051416.393 362122.5937 40880420.55 0.017734137 5.73E-13 12.24210479 -1.721782824 LLAS(ph)S(ph)PALPSSGAQAR ddPTM_A459_MK2206_30min_R1 1 LLASSPALPSSGAQAR 16 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 2 LLAS(1)S(1)PALPSSGAQAR 115.7 0.036022 7000300 140.9 0 0 167.09 121.22 116.21 0 124.23 133.78 0 TRUE FALSE 128.9157151 0 0 179.9593008 116.3915507 122.7897098 0 123.1438702 147.6869097 0 0 LLAS(ph)SPALPSSGAQAR ddPTM_A459_MK2206_30min_R1 1 LLASSPALPSSGAQAR 16 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LLAS(0.5)S(0.5)PALPSSGAQAR 178.22 1.12E-06 11768000 4083.2 3411.7 2854.3 3133.1 3300.6 3265.1 3414.4 2742.2 2612.9 2535.9 TRUE FALSE 3735.902398 3189.59771 2660.558069 3374.411905 3169.130113 3449.96714 3186.631606 2718.225235 2884.520305 2850.066437 1.31081239 1.119131003 0.933507386 1.183976577 1.111949557 1.210486568 1.118090289 0.953741007 1.012088795 1 11.47677983 -7.702922053 6.427474741 0.987470396 1.136364795 0.372252045 0.090740087 0.22837012 18.76949909 0.045150067 0.02546036 1.98E-08 7.702922053 0.148894399 LLAS(ph)SPALPSSGAQAR ddPTM_A459_MK2206_30min_R2 2 LLASSPALPSSGAQAR 16 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LLAS(0.5)S(0.5)PALPSSGAQAR;LLAS(0.5)S(0.5)PALPSSGAQAR 249.82 2.22E-29 31610000 68425 71569 68759 84486 76556 72098 72944 51339 61184 76018 TRUE FALSE 73663.67061 68014.98753 71051.39074 77583.22354 73550.02678 74841.73991 63366.36518 58049.18357 66505.67372 73537.53889 1.001715202 0.924901602 0.966192122 1.055015231 1.000169817 1.017735174 0.861687325 0.789381647 0.904377203 1 16.16619327 -7.265846358 24.81643481 0.871310007 0.992884829 0.425034217 0.05865356 295.694383 1665093.563 0.023909656 0.016742722 5.42E-08 7.265846358 0.121574822 LLASPS(ph)SR ddPTM_A459_MK2206_30min_R2 1 LLASPSSR 8 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 LLAS(0.379)PS(0.62)SR 86.136 0.034296 4178800 29510 28217 23655 36490 28283 34020 35204 21314 27664 32860 TRUE FALSE 31769.30829 26815.78481 24443.64589 33508.65027 27172.46731 35314.65494 30581.67251 24099.81298 30070.16471 31787.78089 0.999418877 0.843587821 0.768963583 1.054136191 0.854808563 1.110950622 0.962057484 0.758147071 0.94596615 1 14.95618468 -4.303868801 8.278202986 0.919004593 6.228417567 0.041481408 0.110653608 36431.62611 18631.64824 0.04873916 3582054.813 4.97E-05 4.303868801 5.309412974 LLASQGSQGAPLLST(ph)PK ddPTM_A459_MK2206_30min_R1 1 LLASQGSQGAPLLSTPK 17 0 H3BRB3;Q14807-2;Q14807 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 LLASQGSQGAPLLS(0.105)T(0.894)PK 81.713 0.035491 5893200 1650.2 2064.4 1901 1895 1566.3 1079.1 1505 1435.3 1648.2 1673.7 TRUE FALSE 1509.841824 1930.007185 1771.965416 2040.953228 1503.910954 1140.197709 1404.604196 1422.751323 1819.536288 1881.050592 0.802658807 1.026026197 0.942008378 1.08500709 0.799505851 0.606149412 0.74671261 0.756359946 0.9672979 1 10.87732294 -6.367405139 8.184564671 0.785901163 0.966495412 0.242299687 0.125918834 0.367722559 25.591568 0.038894429 0.044097448 4.29E-07 6.367405139 0.180594249 LLASS(ph)PALPSSGAQAR ddPTM_A459_MK2206_30min_R1 2 LLASSPALPSSGAQAR 16 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LLAS(0.006)S(0.993)PALPSSGAQAR;LLAS(0.028)S(0.972)PALPSSGAQAR 166.64 1.61E-05 14989800 9153.3 8975.8 8750.4 7143.6 8478.4 7901.2 9101.3 7292.9 6847.5 7127.9 TRUE FALSE 8374.763769 8391.473789 8156.447228 7693.80131 8140.687375 8348.559116 8494.168883 7229.138944 7559.322129 8010.958065 1.045413508 1.047499403 1.018161269 0.960409635 1.016193982 1.042142406 1.06031873 0.90240629 0.943622731 1 12.96775908 -7.759459093 24.99999938 0.942260881 1.02518552 0.52260933 0.034174735 40.82105962 515363.8407 0.017781807 0.009601533 1.74E-08 7.759459093 0.082924639 LLCEHFR ddPTM_A459_MK2206_30min_R2 1 LLCEHFR 7 0 A8MU58;Q13155-2;Q13155 A8MU58 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 0 133.47 0.0045311 2901000 10667 15623 10997 17676 14875 14274 14025 14337 12898 13209 FALSE TRUE 11483.67372 14847.18454 11363.63449 16231.81426 14290.93276 14817.20707 12183.50065 16210.89513 14019.84473 12777.99141 0.898707266 1.161934146 0.889313048 1.27029466 1.118402126 1.159588123 0.953475414 1.268657538 1.097186895 1 13.64137345 -5.753396403 24.9999906 1.129289065 1.001179798 0.226515721 0.117412173 284.9862407 885813.2521 0.030304074 0.051305335 1.76E-06 5.753396403 -0.128109267 LLDAEDVDVPS(ph)PDEK ddPTM_A459_MK2206_30min_R1 1 LLDAEDVDVPSPDEK 15 0 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;E9PNZ4;A0A5F9ZGX0;E9PLY5;E9PLY0 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 LLDAEDVDVPS(1)PDEK 92.952 0.012974 10553000 2383.8 2603 2481.4 2427.7 2361.8 2104.5 2551 2287 2499 2317.2 TRUE FALSE 2181.045292 2433.544227 2312.969482 2614.681875 2267.724505 2223.654971 2380.827445 2267.005 2758.779993 2604.27223 0.837487444 0.934443104 0.888144279 1.003997142 0.870770912 0.853848897 0.91420068 0.870494633 1.059328576 1 11.34666455 -8.261268507 24.99971109 1.029664298 0.899518875 0.563811923 0.046736269 11.05734783 1618443.881 0.036270956 0.011696784 5.48E-09 8.261268507 -0.130145423 LLDEEEATDNDLR ddPTM_A459_MK2206_30min_R1 2 LLDEEEATDNDLR 13 0 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 0 ; 236.22 1.96E-16 10461600 1875.03 1714.98 1612.56 1556.02 2083.2 1883.84 1916.23 1821.52 1340.11 1371.71 FALSE TRUE 1715.548852 1603.33449 1503.10392 1675.86493 2000.221733 1990.501393 1788.401793 1805.594643 1479.41923 1541.647791 1.11280207 1.040013484 0.974998264 1.087060832 1.29745701 1.291151847 1.16005861 1.171210865 0.959635034 1 10.59025749 -6.009188725 24.73174536 1.165703606 1.040459487 0.150661978 0.10611276 610.5682831 1643373.834 0.031451903 0.043966008 9.79E-07 6.009188725 -0.125244119 LLDEEEATDNDLR ddPTM_A459_MK2206_30min_R2 4 LLDEEEATDNDLR 13 0 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 0 ;;; 248.98 1.11E-21 22529400 55067 72700 60261 66481 64507 68661 64619 55126 61623 50301.6 FALSE TRUE 59282.97186 69089.82372 62270.07166 61049.28964 61974.13106 71273.94247 56134.44768 62331.15748 66982.85715 48660.26291 1.218303567 1.41984074 1.279690407 1.254602544 1.273608636 1.464725799 1.15359935 1.28094576 1.376541209 1 15.57045649 -11.19187632 2.641490559 0.959578072 1.302723157 0.510458085 0.088849919 8510746.493 7293868.066 2317168.016 0.021877181 6.43E-12 11.19187632 0.343145084 LLDESESAAS(ph)SR ddPTM_A459_MK2206_30min_R2 2 LLDESESAASSR 12 0 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12;Q8N108-19;Q8N108-16;Q8N108-14;Q8N108-18;Q8N108-15 Q8N108-17 MIER1 Mesoderm induction early response protein 1 1 LLDESES(0.006)AAS(0.979)S(0.015)R;LLDES(0.003)ES(0.037)AAS(0.884)S(0.076)R 120.6 0.0039914 6073300 25318 24847 22187 23000 21553 21223 21553.8 16067.7 15662.4 18300.1 TRUE FALSE 27256.36555 23613.13411 22926.70351 21120.82643 20706.72092 22030.65614 18723.76017 18167.80356 17024.68724 17702.96924 1.539649377 1.333851615 1.29507673 1.193066889 1.169675022 1.244461076 1.057662131 1.026257421 0.961685411 1 14.11170374 -1.522878745 0.225553431 0.948694976 4.065759709 0.900040839 0.053776755 15.4435272 0.2001108 0.085944219 17.66062948 0.03 1.522878745 3.117064733 LLDHMAPPPVADQAS(ph)PR ddPTM_A459_MK2206_30min_R1 3 LLDHMAPPPVADQASPR 17 0 A0A0C4DFS6;Q9C004 A0A0C4DFS6 SPRY4 Protein sprouty homolog 4 1 LLDHMAPPPVADQAS(1)PR;LLDHMAPPPVADQAS(1)PR;LLDHMAPPPVADQAS(1)PR 96.633 0.0039124 8791500 6159.6 6506.3 7042.3 6072.8 5795.7 5480.9 7259.1 6430.8 6820.1 7041.7 TRUE FALSE 5635.693675 6082.738687 6564.288297 6540.528108 5564.844996 5791.223821 6774.858684 6374.576194 7529.073801 7914.078958 0.712109862 0.76859717 0.829444378 0.826442109 0.703157629 0.731762199 0.856051439 0.805472908 0.951351868 1 12.95020574 -8.252172077 1.278631643 1.004101739 0.769667935 0.742296361 0.047347533 0.2284362 0.732448602 0.046768153 0.01491151 5.60E-09 8.252172077 -0.234433804 LLDHMAPPPVADQAS(ph)PR ddPTM_A459_MK2206_30min_R2 2 LLDHMAPPPVADQASPR 17 0 A0A0C4DFS6;Q9C004 A0A0C4DFS6 SPRY4 Protein sprouty homolog 4 1 LLDHMAPPPVADQAS(1)PR;LLDHMAPPPVADQAS(1)PR 97.352 0.0037213 8774400 23421 25224 28526 24943 24196 29454 30459 20591.7 28543 27456 TRUE FALSE 25214.12977 23971.41284 29477.0426 22905.07711 23245.94346 30574.89261 26459.69671 23283.10589 31025.61855 26560.11297 0.949323137 0.902534295 1.109823691 0.862386283 0.875220052 1.151158229 0.996219284 0.876619234 1.16812826 1 14.69697366 -6.734484694 24.99997126 1.02807603 0.942922628 0.191472887 0.100052029 445.0749475 412797.5047 0.033045005 0.033036787 1.84E-07 6.734484694 -0.085153402 LLDLPAAAS(ph)SEDIER ddPTM_A459_MK2206_30min_R1 1 LLDLPAAASSEDIER 15 0 P22466 P22466 GAL Galanin peptides;Galanin;Galanin message-associated peptide 1 LLDLPAAAS(0.978)S(0.022)EDIER 110.97 0.0039108 0 305.63 425.04 354.39 290.49 351.83 415.37 454.54 292.33 442.97 460.78 TRUE FALSE 279.6345636 397.3698187 330.3349942 312.8635901 337.8158661 438.8878904 424.218466 289.7741896 489.0183167 517.8649051 0.539975891 0.767323321 0.637878703 0.604141325 0.652324308 0.847494947 0.819168207 0.559555565 0.944297078 1 9.016431982 -10.9490961 0.131572914 1.411072426 0.514705799 0.502636195 0.108564016 37.04729328 0.847774665 5.95387531 1.068280071 1.12E-11 10.9490961 -0.896366627 LLDLSDSTSVAS(ph)FPSADETDGNLPESR ddPTM_A459_MK2206_30min_R2 2 LLDLSDSTSVASFPSADETDGNLPESR 27 0 Q13464 Q13464 ROCK1 Rho-associated protein kinase 1 1 LLDLSDSTSVAS(1)FPSADETDGNLPESR;LLDLSDST(0.002)S(0.002)VAS(0.995)FPS(0.001)ADETDGNLPESR 134.15 9.17E-11 0 4731.5 5253.2 7278.6 6718.2 7064 6690.9 5935.1 7149.7 4690.9 4867.9 TRUE FALSE 5093.747278 4992.333727 7521.264891 6169.30157 6786.631866 6945.526888 5155.814241 8084.190339 5098.906003 4709.060822 1.081690696 1.060154862 1.597190008 1.310091715 1.441185859 1.474928261 1.094871023 1.716730925 1.082786185 1 12.20122364 -5.225935599 24.31992248 1.36397 1.070922491 0.186360476 0.220043954 604.7806484 414269.1543 0.051036489 0.135015681 5.94E-06 5.225935599 -0.293047509 LLDPEDISVDHPDEK ddPTM_A459_MK2206_30min_R2 1 LLDPEDISVDHPDEK 15 0 A0A087WUZ3;Q01082;Q01082-2;F8W6C1;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 0 141.59 0.00054075 2054300 14135 16860 17374 19547 14976 15785 15046 14562 12159 12802 FALSE TRUE 15217.18647 16022.75692 17953.24049 17949.94757 14387.96699 16385.70924 13070.44213 16465.3034 13216.56784 12384.27179 1.22875101 1.293798876 1.449680756 1.449414861 1.161793542 1.323106398 1.055406596 1.329533434 1.067205894 1 13.59622142 -7.956786889 0.494841984 1.002302382 1.349862546 0.474215685 0.110740802 0.810694386 0.489380682 0.118854521 0.074855703 1.10E-08 7.956786889 0.347560165 LLDPEDVDVPQPDEK ddPTM_A459_MK2206_30min_R2 1 LLDPEDVDVPQPDEK 15 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 112.64 0.040962 3202900 29153 22316 28346 31424 32203 23218 31628 24461 22532 31656 FALSE TRUE 31384.97609 21207.81989 29291.04149 28856.55868 30938.54841 24101.57726 27475.20561 27658.13669 24491.79263 30623.06731 1.024880224 0.692543946 0.956502534 0.942314445 1.010302074 0.787039947 0.897206192 0.903179829 0.799782477 1 14.90233117 -7.728455041 0.004723644 1.799754424 2.97E-07 0.00999234 0.103682299 41506.56094 184.5233157 35065.07469 35227.59906 1.87E-08 7.728455041 -1.799754128 LLDPSS(ph)PLALALSAR ddPTM_A459_MK2206_30min_R1 1 LLDPSSPLALALSAR 15 0 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 LLDPS(0.01)S(0.99)PLALALSAR 207.85 1.74E-06 6166600 2288 1938 1910.4 1709.6 1924.2 1765 2015.7 1783 1699.2 1581.7 TRUE FALSE 2093.393585 1811.835848 1780.727371 1841.273688 1847.555039 1864.932775 1881.236331 1767.411419 1875.837921 1777.652937 1.177616587 1.019229238 1.00172949 1.035789186 1.039322694 1.049098356 1.058269751 0.994238741 1.055232932 1 10.79575797 -4.759079857 24.99972748 1.029286849 1.17761678 0.800998247 0.022350297 26.91090178 285065.565 0.005510222 0.03587065 1.74E-05 4.759079857 0.148329931 LLDSDS(ph)HTGKAMRS(ph)T(ph)GMVVEK ddPTM_A459_MK2206_30min_R1 1 LLDSDSHTGKAMRSTGMVVEK 21 2 J3KNG8;Q8TF40;A0A087WX11;Q8TF40-3 J3KNG8 FNIP1 Folliculin-interacting protein 1 3 LLDS(0.161)DS(0.667)HT(0.181)GKAMRS(0.995)T(0.995)GMVVEK 40.432 0.046725 31786000 7000.9 7619.8 7776.6 6363.2 6318.1 5600.5 6627.6 7661.3 5987.5 6488.2 TRUE FALSE 6405.436692 7123.749635 7248.746059 6853.294767 6066.436698 5917.59547 6185.484897 7594.318062 6609.922051 7292.007199 0.878418866 0.976925754 0.994067321 0.939836533 0.831929609 0.811518051 0.848255457 1.041457839 0.906461262 1 12.83210027 -10.55675275 4.58098572 1.000001633 0.915605961 0.116115311 0.070838364 109818399.8 9.117165588 3667.330249 0.018797947 2.77E-11 10.55675275 -0.084395671 LLDSSTVTHLFK ddPTM_A459_MK2206_30min_R1 2 LLDSSTVTHLFK 12 0 G3V5Z7;P60900;G3V3I1;G3V295;P60900-2;G3V3U4 G3V5Z7 PSMA6 Proteasome subunit alpha type;Proteasome subunit alpha type-6 0 ; 125.23 0.0040841 8140700 8486.1 7192.9 8361.8 7032.6 10194 8154.4 9819.4 8725.3 7604.3 6130.5 FALSE TRUE 7764.312633 6724.640903 7794.224313 7574.252071 9787.951394 8616.095081 9164.365743 8649.015622 8394.794197 6889.992623 1.126897089 0.976001176 1.131238412 1.099312073 1.420604046 1.250523121 1.330098049 1.255301144 1.218403946 1 12.75028672 -6.085433941 9.739739025 1.263075884 1.075665036 0.347121034 0.107879077 0.442229045 48.07914454 0.030084142 0.038890102 8.21E-07 6.085433941 -0.187410849 LLEDGEDFNLGDALDS(ph)SNSMQTIQK ddPTM_A459_MK2206_30min_R1 2 LLEDGEDFNLGDALDSSNSMQTIQK 25 0 P05783 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 LLEDGEDFNLGDALDS(0.403)S(0.276)NS(0.276)MQT(0.045)IQK;LLEDGEDFNLGDALDS(0.331)S(0.331)NS(0.331)MQT(0.007)IQK 91.733 6.55E-05 13674900 3656.09 3615.9 3767.69 3368.53 3760.6 3129.14 3827.86 3697.1 3284.16 3332.43 TRUE FALSE 3345.120347 3380.504253 3511.9497 3627.974764 3610.807339 3306.309203 3572.510444 3664.776644 3625.560184 3745.276587 0.893157092 0.902604701 0.937701027 0.968680064 0.96409631 0.882794401 0.953870925 0.978506276 0.968035364 1 11.87085655 -1.522878752 0.102556111 1.028943503 0.655196224 0.510056908 0.026274348 117.2043274 0.851905756 0.341787293 6.168995804 0.03 1.522878752 -0.373747279 LLEDGEDFNLGDALDSS(ph)NSMQTIQK ddPTM_A459_MK2206_30min_R1 2 LLEDGEDFNLGDALDSSNSMQTIQK 25 0 P05783 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 LLEDGEDFNLGDALDS(0.013)S(0.493)NS(0.493)MQT(0.001)IQK;LLEDGEDFNLGDALDS(0.111)S(0.441)NS(0.441)MQT(0.007)IQK 156.23 5.41E-13 22215500 8773.9 8216.4 8702.9 7502.5 8494.5 7614.1 8108.2 7828.3 7379.7 6790.2 TRUE FALSE 8027.633731 7681.510867 8112.171396 8080.34385 8156.146078 8045.203762 7567.316772 7759.857998 8146.846224 7631.421239 1.051918572 1.006563604 1.06299615 1.058825558 1.068758469 1.054220899 0.991599931 1.016829992 1.067539842 1 12.89773605 -10.83329866 7.569701952 0.999999757 1.041104519 0.189845507 0.026036246 1.15E-07 1.05E-08 0.026693128 0.006473996 1.47E-11 10.83329866 0.041104762 LLEDGEDFNLGDALDSS(ph)NSMQTIQK ddPTM_A459_MK2206_30min_R2 2 LLEDGEDFNLGDALDSSNSMQTIQK 25 0 P05783 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 LLEDGEDFNLGDALDS(0.254)S(0.664)NS(0.08)MQT(0.002)IQK;LLEDGEDFNLGDALDS(0.219)S(0.562)NS(0.219)MQT(0.001)IQK 84.646 7.00E-05 24172700 58822 77274 68380 78112 78076 73842 81235 64906 67494 74980 TRUE FALSE 63325.45755 73436.68553 70659.75507 71729.99973 75010.34394 76652.10905 70568.74692 73389.43706 73364.50612 72533.40874 0.873052275 1.012453252 0.974168405 0.988923601 1.034148887 1.056783493 0.972913698 1.011801849 1.011458132 1 16.14635803 -4.760046605 24.99618604 1.007084191 0.873052112 0.732158245 0.024297734 19.18767625 344238.2645 0.006375743 0.038722901 1.74E-05 4.760046605 -0.134032079 LLEDGEDFNLGDALDSSNS(ph)MQTIQK ddPTM_A459_MK2206_30min_R1 1 LLEDGEDFNLGDALDSSNSMQTIQK 25 0 P05783 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 LLEDGEDFNLGDALDS(0.173)S(0.173)NS(0.65)MQT(0.003)IQK 108.52 1.60E-07 5128000 2407.5 2006 2019.1 1846.5 2067.5 1794.3 2112.2 1653.8 2157.1 1624.1 TRUE FALSE 2202.729483 1875.409035 1882.049118 1988.71775 1985.147097 1895.891715 1971.298992 1639.341001 2381.338264 1825.305769 1.20677287 1.027449245 1.031087037 1.089525812 1.087569617 1.038670752 1.079982886 0.898118566 1.304624301 1 10.83392244 -4.753674138 24.49727141 1.059251227 1.206773217 0.166791245 0.096983928 374.5299997 1181416.396 0.022096585 0.22903344 1.76E-05 4.753674138 0.14752199 LLEDGEDFNLGDALDSSNSMQTIQK ddPTM_A459_MK2206_30min_R1 1 LLEDGEDFNLGDALDSSNSMQTIQK 25 0 P05783 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 259.93 5.25E-61 15985000 2864.8 3086.2 2781.1 2315.6 2983.1 2593.4 3263.3 2835.2 2810.7 2940.2 FALSE TRUE 2621.133716 2885.287819 2592.326681 2493.947913 2864.27681 2740.236067 3045.611211 2810.412145 3102.882323 3304.454173 0.793212306 0.873151107 0.784494668 0.754723105 0.866792717 0.829255279 0.921668467 0.850492093 0.938999956 1 11.69019627 -8.126913715 0.509996768 1.001497096 0.804356867 0.696170845 0.039796703 0.507999026 0.330953461 0.043055486 0.024461516 7.47E-09 8.126913715 -0.197140229 LLEDGEDFNLGDALDSSNSMQTIQK ddPTM_A459_MK2206_30min_R2 3 LLEDGEDFNLGDALDSSNSMQTIQK 25 0 P05783 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 ;; 166.35 4.57E-18 4620100 33305.7 41065.5 44966 47207 41322.7 40005.4 42492.4 35784.2 35071.2 43084 FALSE TRUE 35855.61 39026.24698 46465.144 43350.03709 39700.16317 41527.83353 36913.09684 40461.31781 38121.62958 41678.17261 0.860297075 0.936371356 1.114855597 1.040113671 0.952540879 0.996392858 0.885669753 0.970803547 0.914666532 1 15.3470044 -7.188024602 24.99977013 0.940350104 0.988436231 0.074233684 0.068752976 364.1373338 123997.7813 0.027840899 0.021565463 6.49E-08 7.188024602 0.048086127 LLEDS(ph)EES(ph)SEETVSR ddPTM_A459_MK2206_30min_R2 1 LLEDSEESSEETVSR 15 0 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 2 LLEDS(0.998)EES(0.825)S(0.176)EET(0.002)VSR 123.63 0.025845 4709200 21061 25262 20696 26481 25856 23123 29610 20557 24892 23316 TRUE FALSE 22673.44635 24007.52581 21385.99431 24317.41759 24840.76352 24002.96197 25722.17143 23243.87048 27057.06117 22555.20083 1.005242495 1.064389805 0.948162443 1.078129065 1.101331959 1.064187464 1.140409772 1.030532632 1.199593006 1 14.46117251 -5.936708855 10.76405413 1.091945569 1.011833397 0.292642847 0.058207275 0.598490593 98.62855894 0.015127247 0.022451688 1.16E-06 5.936708855 -0.080112172 LLEDS(ph)EESSEETVSR ddPTM_A459_MK2206_30min_R2 2 LLEDSEESSEETVSR 15 0 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 1 LLEDS(1)EESSEETVSR;LLEDS(1)EESSEETVSR 268.5 8.08E-45 9999900 19651.9 20035.1 19957.7 24987 22337 22379.3 26328 18957.5 25132 23400 TRUE FALSE 21156.46457 19040.18607 20623.07976 22945.48217 21459.93715 23230.95994 22871.10197 21435.31034 27317.93593 22636.45992 0.934618958 0.84112914 0.911055873 1.013651527 0.94802532 1.026262942 1.010365669 0.946937393 1.206811314 1 14.46636073 -6.123661302 0.558682524 1.054273388 0.862520273 0.417036757 0.07001964 1.178952246 0.708167913 0.050103329 0.123323023 7.52E-07 6.123661302 -0.191753115 LLEELEEGQK ddPTM_A459_MK2206_30min_R2 1 LLEELEEGQK 10 0 E5RIF1;D6RG00;H0YBX6;I3L0A0;Q13404-8;Q15819;Q13404;Q13404-7;Q13404-2;Q13404-1 E5RIF1 UBE2V2;UBE2V1;TMEM189-UBE2V1 Ubiquitin-conjugating enzyme E2 variant 1;Ubiquitin-conjugating enzyme E2 variant 2 0 137.95 0.031579 0 9661.2 9965.9 8159.5 9431.7 9514.6 7560.5 9061.2 7184.7 6788.6 8929.3 FALSE TRUE 10400.8689 9471.007898 8431.533658 8661.099939 9141.008997 7848.220125 7871.453556 8123.764959 7379.060157 8637.937672 1.204091682 1.096443186 0.976104943 1.002681458 1.058239749 0.908575684 0.91126538 0.940475061 0.854261797 1 13.07647119 -1.522878745 0.434324488 0.922822949 6.725472885 0.730640874 0.050774564 42.62597697 0.531052264 0.033791809 217.0853169 0.03 1.522878745 5.802649935 LLEENETEAVTVPT(ph)PSPTPVR ddPTM_A459_MK2206_30min_R1 1 LLEENETEAVTVPTPSPTPVR 21 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 LLEENETEAVT(0.02)VPT(0.416)PS(0.416)PT(0.148)PVR 119.2 0.00010129 4745900 1412.9 1610.4 1378 1228.1 1875.6 1905.3 1647.1 1346.9 1125.8 1214.1 TRUE FALSE 1292.725436 1505.562667 1284.465199 1322.688475 1800.89088 2013.176439 1537.224964 1335.124195 1242.830939 1364.511874 0.947390389 1.10337088 0.941336769 0.969349186 1.319805943 1.475382133 1.126575 0.978462863 0.910824568 1 10.41416923 -4.761270717 22.29906821 1.10269482 0.947390191 0.056761719 0.171235298 3.609715081 471058.036 0.047655332 0.267806184 1.73E-05 4.761270717 -0.155304629 LLEENETEAVTVPTPS(ph)PTPVR ddPTM_A459_MK2206_30min_R1 4 LLEENETEAVTVPTPSPTPVR 21 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 LLEENETEAVTVPTPS(0.755)PT(0.244)PVR;LLEENETEAVTVPTPS(0.765)PT(0.235)PVR;LLEENETEAVTVPT(0.002)PS(0.764)PT(0.233)PVR;LLEENETEAVTVPTPS(0.765)PT(0.234)PVR 239.27 3.42E-31 131391700 11506.7 11194.4 12013.1 9977.7 12423.1 10791 11618.6 11310 10163.4 9046.9 TRUE FALSE 10527.99474 10465.64253 11197.68424 10746.18418 11928.26162 11401.97709 10843.54439 11211.11786 11219.9218 10167.69827 1.035435401 1.029303019 1.101299817 1.05689448 1.173152596 1.121392157 1.066469923 1.102621022 1.103486895 1 13.3117055 -5.260385206 24.88474012 1.096302888 1.032369204 0.219891014 0.042881144 111.3736765 2628981.346 0.010763993 0.02533767 5.49E-06 5.260385206 -0.063933685 LLEENETEAVTVPTPS(ph)PTPVR ddPTM_A459_MK2206_30min_R2 7 LLEENETEAVTVPTPSPTPVR 21 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 LLEENETEAVTVPT(0.002)PS(0.996)PT(0.001)PVR;LLEENETEAVTVPTPS(0.702)PT(0.298)PVR;LLEENETEAVTVPT(0.054)PS(0.938)PT(0.008)PVR;LLEENETEAVTVPT(0.001)PS(0.985)PT(0.015)PVR;LLEENETEAVTVPT(0.184)PS(0.794)PT(0.022)PVR;LLEENETEAVTVPT(0.003)PS(0.986)PT(0.011)PVR;LLEENETEAVTVPTPS(0.981)PT(0.019)PVR 309.77 5.27E-118 883153700 108402.2 145840.2 147356.47 153339.1 139179.4 153373.8 151565.3 122703.7 149594.5 131284.8 TRUE FALSE 116701.5558 138597.9877 152269.2612 140810.805 133714.5174 159210.5474 131664.594 138741.4949 162605.9592 127000.9877 0.918902741 1.091314251 1.198961236 1.108737873 1.052862028 1.253616608 1.036721024 1.092444219 1.280351926 1 16.95448019 -4.785210952 3.837051072 1.129996484 0.899010642 0.337789708 0.087279461 0.264518523 7.011554826 0.020832318 0.171114119 1.64E-05 4.785210952 -0.230985842 LLEGEEER ddPTM_A459_MK2206_30min_R1 3 LLEGEEER 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5;Q03252;P20700;E9PBF6 P02545;P02545-2;Q03252;P20700 LMNA;LMNB2;LMNB1 Prelamin-A/C;Lamin-A/C;Lamin-B2;Lamin-B1 0 ;; 187.34 0.0053736 55148000 8764 8587.9 8832.3 8036.4 10357.4 8489.6 10052.2 8439.3 7677.8 7298.9 FALSE TRUE 8018.575778 8028.826149 8232.788084 8655.36492 9944.842826 8970.273815 9381.636079 8365.51609 8475.934785 8203.142836 0.977500446 0.978750012 1.003613889 1.055127906 1.212321061 1.093516716 1.143663626 1.01979403 1.033254565 1 13.00196103 -5.798163591 3.460321694 1.091246831 0.982824458 0.346509332 0.058955497 0.249651658 6.173877942 0.017666332 0.029297337 1.59E-06 5.798163591 -0.108422373 LLEGEEER ddPTM_A459_MK2206_30min_R2 1 LLEGEEER 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5;Q03252;P20700;E9PBF6 P02545;P02545-2;Q03252;P20700 LMNA;LMNB2;LMNB1 Prelamin-A/C;Lamin-A/C;Lamin-B2;Lamin-B1 0 132.08 0.047149 15642000 63884 78183 73344 72205 51264 60306 71118 47589 71686 64716 FALSE TRUE 68775.00816 74300.54591 75789.25235 66305.62053 49251.11778 62600.98709 61780.12117 53809.0457 77921.1187 62604.32222 1.098566452 1.186827734 1.210607346 1.059122089 0.786704752 0.999946727 0.986834758 0.859510075 1.244660367 1 15.93397464 -5.990187538 8.362760516 0.969335608 1.162616127 0.344718208 0.114194797 0.15057515 79.79631658 0.03163087 0.045751564 1.02E-06 5.990187538 0.19328052 LLELTS(ph)SYSPDVSDYK ddPTM_A459_MK2206_30min_R2 1 LLELTSSYSPDVSDYK 16 0 P38432 P38432 COIL Coilin 1 LLELT(0.162)S(0.437)S(0.322)Y(0.002)S(0.076)PDVS(0.001)DYK 97.073 0.0078181 2501600 11310 16163 14509 13806 13346 10422 15648 11522 9220.9 14473 TRUE FALSE 12175.9023 15360.36892 14992.72282 12678.00564 12821.96898 10818.61651 13593.3988 13027.96496 10022.91721 14000.7472 0.869660892 1.097110655 1.07085162 0.905523502 0.91580605 0.772717082 0.970905239 0.930519263 0.715884451 1 13.7732162 -5.871841879 5.707357992 0.882381614 1.020298916 0.255296653 0.098052798 0.262880229 12.17336324 0.027181874 0.040951783 1.34E-06 5.871841879 0.137917302 LLELTSS(ph)YSPDVSDYK ddPTM_A459_MK2206_30min_R1 1 LLELTSSYSPDVSDYK 16 0 P38432 P38432 COIL Coilin 1 LLELTS(0.071)S(0.907)YS(0.022)PDVSDYK 264.85 1.19E-39 8745400 1959.1 1721.1 1630 1235.6 1504 1639.5 1921.8 1455.2 1769.8 1867.4 TRUE FALSE 1792.468257 1609.056077 1519.360141 1330.766126 1444.092495 1732.327073 1793.600229 1442.47734 1953.777043 2098.74761 0.854065657 0.766674406 0.723936568 0.634076303 0.688073444 0.825409909 0.854605013 0.687303863 0.930925202 1 11.03531297 -8.416059303 4.393781741 0.997651378 0.75362629 0.594337552 0.070701949 0.153384383 4.560665739 0.073316203 0.019191721 3.84E-09 8.416059303 -0.244025087 LLEPVLLLGK ddPTM_A459_MK2206_30min_R1 2 LLEPVLLLGK 10 0 M0R3H0;M0R210;P62249;M0QX76;M0R1M5;Q6IPX4 M0R3H0 RPS16 40S ribosomal protein S16 0 ; 176.79 3.61E-07 0 11020.5 12728.7 12890.7 13038.4 12361 11130.4 10310 10483.6 8337.9 8909.9 FALSE TRUE 10083.1486 11900.05932 12015.7152 14042.61983 11868.6352 11760.59363 9622.238712 10391.94299 9204.654542 10013.72568 1.006932777 1.188374807 1.199924542 1.40233718 1.185236702 1.174447354 0.960904964 1.037769889 0.919203785 1 13.28969122 -7.199195682 4.2918106 0.981867835 1.205149767 0.555474598 0.093345359 0.177488579 6.623654155 0.039361525 0.02945239 6.32E-08 7.199195682 0.223281932 LLETTDRPDGHQNNLR ddPTM_A459_MK2206_30min_R1 1 LLETTDRPDGHQNNLR 16 1 Q14974;Q14974-2;J3KTM9 Q14974 KPNB1 Importin subunit beta-1 0 116.9 0.0053095 6591100 1067.5 897.02 1061.8 764.26 1113.6 1266.7 1079 910.83 955.8 711.96 FALSE TRUE 976.7035193 838.623835 989.7279743 823.1234376 1069.242954 1338.419459 1007.021879 902.8667093 1055.15883 800.1629798 1.220630726 1.048066277 1.236907979 1.028694726 1.336281459 1.672683557 1.258520957 1.128353513 1.31867989 1 9.644150073 -6.27900671 24.36936255 1.310155821 1.134848094 0.147447059 0.173398661 1033.963424 1434308.106 0.055141156 0.062672182 5.26E-07 6.27900671 -0.175307726 LLEVQPQVANS(ph)PSSAAQK ddPTM_A459_MK2206_30min_R2 1 LLEVQPQVANSPSSAAQK 18 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 LLEVQPQVANS(0.367)PS(0.367)S(0.266)AAQK 215.64 6.10E-13 4368700 30658 29450 27660 32301 29126 28594 28172 22979 22118 35176 TRUE FALSE 33005.20005 27987.55582 28582.17059 29661.90497 27982.36689 29682.16471 24472.98256 25982.4342 24041.78366 34028.21 0.969936416 0.822480989 0.839955161 0.871685727 0.8223285 0.872281108 0.719196883 0.763555714 0.706525076 1 15.05444364 -7.238386102 24.27004999 0.777615722 0.861475194 0.117126283 0.085802144 903.1394638 950809.0991 0.03074301 0.023795737 5.78E-08 7.238386102 0.083859472 LLFQS(ph)YNVNDWLVK ddPTM_A459_MK2206_30min_R1 2 LLFQSYNVNDWLVK 14 0 B4DZ85;B4DF87;Q13772;Q13772-3;Q13772-4 B4DZ85 NCOA4 Nuclear receptor coactivator 4 1 LLFQS(1)YNVNDWLVK;LLFQS(1)YNVNDWLVK 203.52 3.45E-05 20496700 2958.62 2897.67 3563.65 2898.2 3719.1 2813.28 3357.67 3385 3071.12 2527.53 TRUE FALSE 2706.973833 2709.031156 3321.759367 3121.419866 3570.960372 2972.565482 3133.685961 3355.405302 3390.373914 2840.659498 0.952938511 0.953662753 1.169362033 1.098836333 1.257088494 1.046434986 1.103154378 1.181206443 1.193516476 1 11.47201019 -5.255080292 24.60978504 1.136982789 0.953300597 0.500899699 0.07084388 304.2051583 1177268.812 0.017444197 0.043790053 5.56E-06 5.255080292 -0.183682192 LLGHS(ph)PVLR ddPTM_A459_MK2206_30min_R2 3 LLGHSPVLR 9 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 LLGHS(1)PVLR;LLGHS(1)PVLR;LLGHS(1)PVLR 87.713 0.02127 13285400 65860 63125 57286 67291 67848 73149 64971 49317 49831 72642 TRUE FALSE 70902.29224 59990.30429 59195.88665 61793.11005 65183.94661 75932.73645 56440.22966 55762.90123 54165.21031 70271.69749 1.008973666 0.853690838 0.842385893 0.879345629 0.927598862 1.080559303 0.803171571 0.793532862 0.770796953 1 16.10065613 LLGLTPPEGGAGDRS(ph)EEEASSTEKPTK ddPTM_A459_MK2206_30min_R1 1 LLGLTPPEGGAGDRSEEEASSTEKPTK 27 2 V9GYY5;Q9UGY1 V9GYY5 NOL12 Nucleolar protein 12 1 LLGLT(0.004)PPEGGAGDRS(0.907)EEEAS(0.036)S(0.036)T(0.014)EKPT(0.003)K 45.205 0.022275 40879000 1385.2 1460.5 1478 1204.4 1054.5 1132.6 1245.3 1133.9 1171.8 1304.7 TRUE FALSE 1267.381466 1365.421185 1377.677478 1297.163097 1012.497032 1196.726833 1162.228309 1123.986432 1293.612803 1466.336086 0.864318541 0.931178873 0.939537321 0.884628776 0.69049452 0.816134067 0.792607043 0.766527157 0.882207576 1 10.51800009 -6.017092232 24.63762464 0.808831935 0.913370784 0.190862729 0.078388238 762.7262642 1099434.244 0.021674033 0.028694713 9.61E-07 6.017092232 0.104538849 LLGLTPPEGGAGDRS(ph)EEEASSTEKPTK ddPTM_A459_MK2206_30min_R2 1 LLGLTPPEGGAGDRSEEEASSTEKPTK 27 2 V9GYY5;Q9UGY1 V9GYY5 NOL12 Nucleolar protein 12 1 LLGLT(0.003)PPEGGAGDRS(0.725)EEEAS(0.183)S(0.04)T(0.04)EKPT(0.009)K 49.497 0.013359 24052000 41253 49151 52316 57821 46128 42451 60825 32453 41689 57561 TRUE FALSE 44411.3614 46710.23281 54060.18933 53096.83934 44316.78295 44066.50255 52838.60444 36694.71853 45315.03386 55682.78928 0.797577887 0.838863021 0.970859938 0.95355926 0.795879364 0.791384611 0.948921653 0.658995697 0.813806823 1 15.76494386 -6.281136069 24.48565096 0.82131332 0.892307387 0.05998247 0.098950021 1514.452803 1882664.014 0.030727967 0.034895502 5.23E-07 6.281136069 0.070994067 LLGPAPEDDGGHNDHSQPQAS(ph)QDQDSHTLSPQV ddPTM_A459_MK2206_30min_R1 1 LLGPAPEDDGGHNDHSQPQASQDQDSHTLSPQV 33 0 Q92610 Q92610 ZNF592 Zinc finger protein 592 1 LLGPAPEDDGGHNDHS(0.004)QPQAS(0.373)QDQDS(0.281)HT(0.281)LS(0.061)PQV 42.973 0.016354 6197100 1358.1 1308.4 1458.4 853.71 1598 1714.6 1575.1 1020.5 1401.9 1311.2 TRUE FALSE 1242.586463 1223.222922 1359.407871 919.4628921 1534.348276 1811.67917 1470.027953 1011.577876 1547.632522 1473.641355 0.843208192 0.830068265 0.922482168 0.623939393 1.04119518 1.229389474 0.997547977 0.686447807 1.050209752 1 10.52516974 -6.300342916 24.9986519 0.996387815 0.815117307 0.309378233 0.142954664 782.4897005 502810.542 0.047438706 0.053791313 5.01E-07 6.300342916 -0.181270508 LLGPAPEDDGGHNDHSQPQASQDQDS(ph)HTLSPQV ddPTM_A459_MK2206_30min_R2 1 LLGPAPEDDGGHNDHSQPQASQDQDSHTLSPQV 33 0 Q92610 Q92610 ZNF592 Zinc finger protein 592 1 LLGPAPEDDGGHNDHSQPQAS(0.004)QDQDS(0.531)HT(0.273)LS(0.192)PQV 93.546 1.87E-09 4702700 4627 7934.3 6801.5 8218.7 8888.9 11005 9078 6399.6 6651.9 7244.4 TRUE FALSE 4981.246678 7540.2942 7028.258615 7547.20592 8539.877123 11423.80299 7886.047695 7236.049693 7230.470238 7008.015821 0.710792727 1.075952793 1.00288852 1.076939053 1.218587021 1.630105194 1.125289654 1.032539006 1.031742853 1 12.77479032 -4.276249459 0.956729764 1.175843417 4.19E-10 0.34305433 0.176842681 5.786139188 2.158298807 0.063310793 8.871376335 5.29E-05 4.276249459 -1.175843416 LLGPAPEDDGGHNDHSQPQASQDQDSHT(ph)LSPQV ddPTM_A459_MK2206_30min_R1 1 LLGPAPEDDGGHNDHSQPQASQDQDSHTLSPQV 33 0 Q92610 Q92610 ZNF592 Zinc finger protein 592 1 LLGPAPEDDGGHNDHSQPQAS(0.007)QDQDS(0.108)HT(0.443)LS(0.443)PQV 81.151 3.27E-06 4886100 944.16 610.71 646.46 687.05 1246.1 1237.7 1106.9 869.62 641.47 751.71 TRUE FALSE 863.854234 570.952668 602.5800963 739.96671 1196.465198 1307.777504 1033.060721 862.017004 708.153102 844.8375099 1.022509327 0.675813587 0.713249695 0.875868675 1.416207477 1.547963353 1.222792204 1.020334673 0.838212193 1 9.72253008 -6.097189979 6.205659783 1.195225035 0.791465464 0.402200941 0.210591806 0.242268103 12.87140374 0.068548869 0.089345995 7.99E-07 6.097189979 -0.403759571 LLGPAPEDDGGHNDHSQPQASQDQDSHTLS(ph)PQV ddPTM_A459_MK2206_30min_R1 1 LLGPAPEDDGGHNDHSQPQASQDQDSHTLSPQV 33 0 Q92610 Q92610 ZNF592 Zinc finger protein 592 1 LLGPAPEDDGGHNDHS(0.011)QPQAS(0.046)QDQDS(0.279)HT(0.279)LS(0.384)PQV 44.84 0.010833 3467600 1049.5 775.99 1005.2 705.21 1420.9 982.03 1100.9 1064.9 963.3 1090 TRUE FALSE 960.2345139 725.47291 936.9698246 759.5253964 1364.302544 1037.63169 1027.46097 1055.589692 1063.438482 1225.037429 0.78384096 0.592204689 0.764849957 0.620001788 1.113682335 0.847020397 0.838718022 0.861679543 0.868086523 1 10.25861011 -6.235436565 24.99996351 0.906748954 0.688553332 0.579747198 0.095980338 573.5170375 551398.146 0.027609366 0.035631276 5.82E-07 6.235436565 -0.218195622 LLGPAPEDDGGHNDHSQPQASQDQDSHTLS(ph)PQV ddPTM_A459_MK2206_30min_R2 4 LLGPAPEDDGGHNDHSQPQASQDQDSHTLSPQV 33 0 Q92610 Q92610 ZNF592 Zinc finger protein 592 1 LLGPAPEDDGGHNDHSQPQAS(0.004)QDQDS(0.352)HT(0.071)LS(0.573)PQV;LLGPAPEDDGGHNDHS(0.012)QPQAS(0.03)QDQDS(0.201)HT(0.201)LS(0.556)PQV;LLGPAPEDDGGHNDHSQPQASQDQDS(0.03)HT(0.023)LS(0.947)PQV;LLGPAPEDDGGHNDHSQPQAS(0.009)QDQDS(0.19)HT(0.19)LS(0.61)PQV 128.42 5.25E-25 33103600 72375 87525 80322 107954 98363 101092 96334 82095 90105 80251 TRUE FALSE 77916.08565 83178.63577 82999.89539 99133.81287 94500.77439 104939.1269 83685.23008 92825.09837 97942.17003 77632.41644 1.003654005 1.071442055 1.069139661 1.276964153 1.217284979 1.351743662 1.077967606 1.195700232 1.261614343 1 16.24437157 -5.655997164 6.334383745 1.207456742 1.046060822 0.337261347 0.095510356 0.223370642 11.76663685 0.0251526 0.043864702 2.21E-06 5.655997164 -0.16139592 LLGPNAS(ph)PDGLIPWTR ddPTM_A459_MK2206_30min_R1 1 LLGPNASPDGLIPWTR 16 0 A0A669KB68;A0A669KB56;A0A669KBA4;A0A669KB53;P42224;A0A669KB75;A0A669KB52;J3KPM9;A0A669KBI6;P42224-2 A0A669KB68 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription 1 LLGPNAS(0.999)PDGLIPWT(0.001)R 197.94 1.03E-20 0 1757.4 1800.4 1598.7 1683 1819.2 1397.2 1750.2 1308.7 1146.1 1150.4 TRUE FALSE 1607.923902 1683.193633 1490.184698 1812.624952 1746.737412 1476.308257 1633.447351 1297.258174 1265.241196 1292.920237 1.243637353 1.301854194 1.1525728 1.401961931 1.35100168 1.141840165 1.263378285 1.003355146 0.978591842 1 10.33641756 -7.767607996 5.840602898 0.990147721 1.266822251 0.733794597 0.074873352 0.083387797 9.931179523 0.040762414 0.020781368 1.71E-08 7.767607996 0.27667453 LLGPNASPDGLIPWT(ph)R ddPTM_A459_MK2206_30min_R1 1 LLGPNASPDGLIPWTR 16 0 A0A669KB68;A0A669KB56;A0A669KBA4;A0A669KB53;P42224;A0A669KB75;A0A669KB52;J3KPM9;A0A669KBI6;P42224-2 A0A669KB68 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription 1 LLGPNAS(0.355)PDGLIPWT(0.645)R 165.58 4.18E-05 11350000 1231.5 1363.6 1176.3 1199.9 1480.6 1123.4 1565.9 1028.7 1290.2 899.82 TRUE FALSE 1126.754458 1274.829392 1096.456033 1292.316506 1421.624567 1187.005937 1461.441668 1019.706184 1424.320907 1011.296495 1.114168262 1.260589153 1.08420828 1.27788093 1.40574458 1.173746713 1.445116912 1.008315751 1.408410802 1 9.981990318 -4.754377873 23.79932966 1.237095394 1.114167859 0.04546762 0.154667957 437.2539822 1473426.968 0.035620534 0.337500996 1.76E-05 4.754377873 -0.122927535 LLGPNASPDGLIPWT(ph)R ddPTM_A459_MK2206_30min_R2 1 LLGPNASPDGLIPWTR 16 0 A0A669KB68;A0A669KB56;A0A669KBA4;A0A669KB53;P42224;A0A669KB75;A0A669KB52;J3KPM9;A0A669KBI6;P42224-2 A0A669KB68 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription 1 LLGPNAS(0.022)PDGLIPWT(0.978)R 119 0.0040179 11332000 7054.3 15619 9090.9 10640 12082 11939 7379.5 9586.9 9869.7 7664.1 TRUE FALSE 7594.382632 14843.38317 9393.986069 9770.677964 11607.59997 12393.34701 6410.562786 10839.94075 10728.14867 7414.021045 1.024327094 2.002069199 1.267056839 1.317864881 1.565628139 1.671609365 0.864653978 1.46208659 1.447008122 1 12.85604049 -13.1944335 0.179881556 8.18E-11 1.510813891 0.134028811 0.304062868 151.7150404 2.24398993 56.56917511 0.970879875 6.39E-14 13.1944335 1.510813891 LLGPSAAADILQLSSS(ph)LPLQSR ddPTM_A459_MK2206_30min_R1 1 LLGPSAAADILQLSSSLPLQSR 22 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 LLGPSAAADILQLS(0.002)S(0.218)S(0.778)LPLQS(0.002)R 183.6 1.05E-16 5881300 1895.9 1279.9 1397.2 1127.4 1219.9 1451.2 1556.9 1343 1404.4 1248.4 TRUE FALSE 1734.643749 1196.578277 1302.361957 1214.232543 1171.3088 1533.36569 1453.042042 1331.258293 1550.392406 1403.061217 1.236327915 0.852833977 0.928228891 0.865416654 0.834823731 1.092871552 1.035622697 0.948824097 1.105006957 1 10.45436224 -6.77568502 24.99986894 1.033213907 0.933298481 0.139567917 0.113831549 465.4369555 816796.6849 0.039642728 0.035122323 1.68E-07 6.77568502 -0.099915426 LLGS(ph)LDEVVLLSPVPELR ddPTM_A459_MK2206_30min_R2 1 LLGSLDEVVLLSPVPELR 18 0 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 LLGS(0.968)LDEVVLLS(0.032)PVPELR 202.79 1.69E-29 0 1965.9 1043.5 2596.3 1173.5 714.67 2356.9 2112.7 692.21 1112.6 2073.4 TRUE FALSE 2116.410816 991.6813074 2682.859346 1077.621296 686.6084649 2446.593481 1835.299952 782.6842237 1209.371937 2005.745128 1.055174352 0.4944204 1.337587368 0.537267313 0.342320894 1.219792808 0.915021518 0.390221177 0.602953945 1 10.96992258 LLGSLDEVVLLS(ph)PVPELR ddPTM_A459_MK2206_30min_R1 2 LLGSLDEVVLLSPVPELR 18 0 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 LLGSLDEVVLLS(1)PVPELR;LLGSLDEVVLLS(1)PVPELR 222.09 1.50E-14 44447000 6641 5811.9 5912.4 5223.1 6693.5 5282.4 4902.9 4695.3 4309.9 4220.1 TRUE FALSE 6076.148077 5433.544254 5511.082761 5625.384067 6426.883721 5581.484923 4575.836487 4654.249487 4757.929528 4742.917848 1.281099161 1.145612137 1.161960409 1.186059773 1.355048501 1.176804048 0.964772453 0.981305103 1.003165073 1 12.21155916 -7.195915894 4.800595133 0.985530291 1.219449214 0.792308922 0.058054988 0.102182614 4.689558102 0.024122635 0.018262964 6.37E-08 7.195915894 0.233918923 LLGSLDEVVLLSPVPELRDS(ph)SK ddPTM_A459_MK2206_30min_R1 1 LLGSLDEVVLLSPVPELRDSSK 22 1 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 LLGSLDEVVLLSPVPELRDS(0.739)S(0.261)K 65.387 0.0038245 3945900 244.12 237.03 193.72 204.66 364.86 154.75 321.36 185.51 232.61 120.31 TRUE FALSE 223.3563121 221.5993039 180.5708261 220.4229487 350.3268536 163.5118113 299.9226608 183.8881056 256.7906419 135.2149111 1.651861546 1.638867357 1.335435749 1.630167464 2.590889206 1.209273518 2.218118241 1.359969135 1.899129614 1 7.079110446 -10.71248452 4.592671752 0.999865752 1.723054593 0.229071848 0.399507411 273717074.4 101.6465648 397079.7104 0.092343714 1.94E-11 10.71248452 0.723188841 LLHEDLDES(ph)DDDMDEK ddPTM_A459_MK2206_30min_R1 2 LLHEDLDESDDDMDEK 16 0 O43150;O43150-2 O43150 ASAP2 "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2" 1 LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK 191.07 6.90E-07 7949600 5127.3 6256.9 6482.1 5366.6 4294.3 4131.9 5860.4 5036.6 6353.2 7794.3 TRUE FALSE 4691.19621 5849.574673 6042.113112 5779.936462 4123.248938 4365.844607 5469.463409 4992.565537 7013.637875 8759.916728 0.535529772 0.667766014 0.689745496 0.659816371 0.470694992 0.498388825 0.624373904 0.56993299 0.800651204 1 13.09670144 -8.505077419 2.683907401 0.998976193 0.591490821 0.779306987 0.070069034 0.126686383 2.137844255 0.074227438 0.020034702 3.13E-09 8.505077419 -0.407485372 LLHEDLDES(ph)DDDMDEK ddPTM_A459_MK2206_30min_R2 5 LLHEDLDESDDDMDEK 16 0 O43150;O43150-2 O43150 ASAP2 "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2" 1 LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK 172.37 7.86E-09 4685250 48263 51200.9 46937.8 45981.3 45390.1 38880.2 47283 42996.8 37765.9 50872.2 TRUE FALSE 51958.05239 48658.33776 48502.68283 42224.4807 43607.85661 40359.81326 41074.6853 48616.62939 41050.70972 49212.24428 1.055795222 0.988744538 0.985581607 0.858007622 0.886118023 0.820117307 0.834643612 0.987897018 0.834156424 1 15.58672969 -5.64173778 4.079172036 0.8830583 1.015341295 0.460828408 0.060478722 0.187228025 5.626148678 0.016418499 0.029672437 2.28E-06 5.64173778 0.132282996 LLHGAGGHLES(ph)PAR ddPTM_A459_MK2206_30min_R2 1 LLHGAGGHLESPAR 14 0 H7C3A6;H7C2E6;H7C361;Q6NZ36-5;Q6NZ36;Q6NZ36-4;Q6NZ36-3;Q6NZ36-2 H7C3A6 C1orf86;FAAP20 Fanconi anemia-associated protein of 20 kDa 1 LLHGAGGHLES(1)PAR 110.32 0.0028368 4115000 25800 28350 28320 29611 30370 28838 30404 19606 18185 25433 TRUE FALSE 27775.26784 26942.18022 29264.17467 27191.68658 29177.5212 29935.4503 26411.91828 22168.57152 19766.69843 24603.12329 1.128932596 1.095071545 1.18944958 1.105212792 1.185927529 1.216733743 1.073518917 0.901047044 0.803422321 1 14.58655385 -7.673326106 3.413114429 0.88529227 1.151493448 0.792197982 0.057499112 0.097275119 2.222897016 0.030381604 0.015671881 2.12E-08 7.673326106 0.266201178 LLHIEELR ddPTM_A459_MK2206_30min_R1 2 LLHIEELR 8 0 Q9Y224 Q9Y224 C14orf166 UPF0568 protein C14orf166 0 ; 190.52 3.76E-18 4189200 9330 9611.2 9885 9084.1 10959.2 9212.1 9713.7 8666 7998.6 7757.9 FALSE TRUE 8536.434506 8985.509133 9214.033741 9783.758956 10522.67186 9733.681141 9065.716797 8590.234076 8830.083093 8719.007221 0.979060378 1.030565626 1.05677556 1.12211846 1.206865827 1.116374937 1.0397648 0.985230756 1.012739509 1 13.08994816 -7.506299437 4.457318348 1.000397509 1.088415634 0.313570425 0.057168902 0.278727091 13.79160298 0.030555411 0.018578854 3.12E-08 7.506299437 0.088018125 LLHIEELR ddPTM_A459_MK2206_30min_R2 4 LLHIEELR 8 0 Q9Y224 Q9Y224 C14orf166 UPF0568 protein C14orf166 0 ;;; 166.68 0.00034799 5635700 36958.7 53011.4 43484.6 57203.1 47795.2 52534.9 49931.6 43127.9 48200.9 49083.3 FALSE TRUE 39788.28649 50378.93096 44934.35486 52529.42375 45918.5203 54534.15243 43375.52094 48764.86461 52393.32715 47481.71594 0.837970695 1.061017488 0.946350695 1.106308454 0.967077945 1.14852952 0.913520501 1.027024059 1.103442159 1 15.53508445 -4.755562191 24.98835347 1.029019492 0.837970383 0.39185597 0.071885923 191.8976322 815818.9414 0.016615982 0.146335359 1.76E-05 4.755562191 -0.191049109 LLHPS(ph)PDLVSQEATLSEAR ddPTM_A459_MK2206_30min_R1 4 LLHPSPDLVSQEATLSEAR 19 0 A0A087WU05;A0A087WY48;Q8IY22-3;Q8IY22-2;Q8IY22 A0A087WU05 CMIP C-Maf-inducing protein 1 LLHPS(1)PDLVSQEATLSEAR;LLHPS(1)PDLVSQEATLSEAR;LLHPS(1)PDLVSQEATLSEAR;LLHPS(1)PDLVSQEATLSEAR 193.54 1.87E-15 73005700 18278.5 18029.7 19828.1 17277.7 21410.6 22281.9 23946.1 22286.4 20420.7 18905.4 TRUE FALSE 16723.81759 16855.96325 18482.22382 18608.43145 20557.77046 23543.48192 22348.69936 22091.55235 22543.50484 21247.54368 0.787094162 0.7933135 0.869852257 0.875792126 0.967536331 1.108056643 1.051825081 1.039722647 1.060993458 1 14.37500845 -6.197990995 1.457862621 1.05559522 0.805027726 0.907796279 0.033436515 0.112180452 0.47782277 0.012655363 0.018504648 6.34E-07 6.197990995 -0.250567494 LLHPS(ph)PDLVSQEATLSEAR ddPTM_A459_MK2206_30min_R2 2 LLHPSPDLVSQEATLSEAR 19 0 A0A087WU05;A0A087WY48;Q8IY22-3;Q8IY22-2;Q8IY22 A0A087WU05 CMIP C-Maf-inducing protein 1 LLHPS(1)PDLVSQEATLSEAR;LLHPS(1)PDLVSQEATLSEAR 130.4 0.00019081 33354000 66814 106167 90784 105882 115680 116142 109680 93817 124288 119007 TRUE FALSE 71929.33121 100894.9012 93810.69325 97231.1019 111137.822 120561.8652 95278.88425 106079.204 135098.3456 115123.8113 0.624799773 0.876403413 0.814867855 0.844578552 0.965376499 1.047236569 0.827621003 0.921435825 1.173504803 1 16.81282673 -3.547747025 0.347360102 1.017035633 1.79E-16 0.576224664 0.092555694 12.47942455 0.615660057 0.085231851 6.303600191 0.000283304 3.547747025 -1.017035633 LLHQFS(ph)FSPER ddPTM_A459_MK2206_30min_R2 1 LLHQFSFSPER 11 0 Q9UJX6-2;Q9UJX6 Q9UJX6-2 ANAPC2 Anaphase-promoting complex subunit 2 1 LLHQFS(0.622)FS(0.378)PER 74.475 0.03645 5983200 31785 39559 31443 42782 39147 43011 51659 29094 36360 34871 TRUE FALSE 34218.48404 37594.55758 32491.29393 39286.57375 37609.89208 44647.81374 44876.11125 32896.68569 39522.52708 33733.16213 1.014387086 1.114468826 0.963185538 1.164627662 1.114923408 1.323558508 1.330326255 0.975203142 1.171622362 1 15.04187994 -5.787110215 23.9112546 1.166033227 1.039059366 0.191631329 0.114230971 217.4031203 202500.3575 0.033152107 0.049197015 1.63E-06 5.787110215 -0.126973861 LLHQFSFS(ph)PER ddPTM_A459_MK2206_30min_R1 2 LLHQFSFSPER 11 0 Q9UJX6-2;Q9UJX6 Q9UJX6-2 ANAPC2 Anaphase-promoting complex subunit 2 1 LLHQFS(0.031)FS(0.969)PER;LLHQFS(0.063)FS(0.937)PER 105.19 0.00783 19802000 12581 11580.5 11931.9 10652 12681.1 11753.2 12487.7 10874.2 9556.7 9508.5 TRUE FALSE 11510.91988 10826.60735 11121.99587 11472.41889 12175.98493 12418.65603 11654.66832 10779.12802 10550.15316 10686.48477 1.077147457 1.01311213 1.040753449 1.073544682 1.139381677 1.162089901 1.09059888 1.008669198 0.987242615 1 13.38349975 -7.806581889 5.226591513 0.996087584 1.08542938 0.491032807 0.040501496 0.199295794 12.23777825 0.026664163 0.012795106 1.56E-08 7.806581889 0.089341796 LLHQFSFS(ph)PER ddPTM_A459_MK2206_30min_R2 1 LLHQFSFSPER 11 0 Q9UJX6-2;Q9UJX6 Q9UJX6-2 ANAPC2 Anaphase-promoting complex subunit 2 1 LLHQFS(0.086)FS(0.914)PER 73.415 0.038226 6535700 24596 31595 27005 37674 28176 34230 33668 24636 27643 31997 TRUE FALSE 26479.08867 30026.03824 27905.33322 34595.91369 27069.66867 35532.64664 29247.35116 27856.00979 30047.33817 30952.94051 0.855462784 0.970054468 0.901540621 1.117693929 0.874542716 1.147957062 0.94489734 0.899947124 0.970742607 1 14.91778885 -3.976288488 1.19784502 0.98518537 0.27759897 0.167235728 0.085024084 16.24334028 4.774489147 0.024478013 22.77988238 0.000105612 3.976288488 -0.707586399 LLHS(ph)PMTK ddPTM_A459_MK2206_30min_R2 1 LLHSPMTK 8 0 A0A6I8PS19;A0A6I8PL80;Q9NVN8 A0A6I8PS19 GNL3L Guanine nucleotide-binding protein-like 3-like protein 1 LLHS(1)PMTK 75.652 0.03817 17824000 145750 142030 134700 148860 126970 119280 122470 106410 114150 148770 TRUE FALSE 156908.7321 134976.9967 139190.8308 136697.6618 121984.5198 123819.284 106389.5419 120318.1524 124078.5607 143915.6471 1.090282643 0.937889656 0.967169544 0.949845723 0.847611238 0.860360124 0.739249304 0.836032459 0.862161712 1 17.13486393 -5.473191681 0.808938127 0.841116003 1.072377994 0.473695437 0.068632099 0.943564757 0.899588174 0.029122078 0.16507989 3.36E-06 5.473191681 0.231261991 LLIDPNCSGHS(ph)PR ddPTM_A459_MK2206_30min_R1 4 LLIDPNCSGHSPR 13 0 Q8WYQ5-3;Q8WYQ5;Q8WYQ5-2;C9JSD5 Q8WYQ5-3 DGCR8 Microprocessor complex subunit DGCR8 1 LLIDPNCS(0.005)GHS(0.995)PR;LLIDPNCS(0.001)GHS(0.999)PR;LLIDPNCS(0.018)GHS(0.982)PR;LLIDPNCS(0.001)GHS(0.999)PR 143.43 0.00047811 13186200 12133.9 8627.3 9168.4 8185.1 12122.6 10783.3 11519.3 8948.6 7807.3 6626.5 TRUE FALSE 11101.84809 8065.661202 8546.074553 8815.51782 11639.73117 11393.84113 10750.86852 8870.363334 8618.896774 7447.440848 1.49069302 1.083011113 1.147518285 1.183697595 1.562916901 1.529900185 1.443565479 1.191061939 1.157296439 1 12.86252904 -8.295847945 1.901575256 1.020525371 1.336636549 0.319300648 0.160962659 0.455977411 3.121409887 0.169027574 0.049304122 5.06E-09 8.295847945 0.316111178 LLIDPNCSGHS(ph)PR ddPTM_A459_MK2206_30min_R2 4 LLIDPNCSGHSPR 13 0 Q8WYQ5-3;Q8WYQ5;Q8WYQ5-2;C9JSD5 Q8WYQ5-3 DGCR8 Microprocessor complex subunit DGCR8 1 LLIDPNCS(0.036)GHS(0.964)PR;LLIDPNCS(0.001)GHS(0.999)PR;LLIDPNCS(0.001)GHS(0.999)PR;LLIDPNCSGHS(1)PR 157.84 0.00024131 32140600 178662 237823 206180 266683 288200 300866 275102 195165 248056 229939 TRUE FALSE 192340.5001 226013.0556 213053.9383 244894.1458 276883.8199 312315.6665 238980.7769 220673.7356 269631.4625 222436.1093 0.864699984 1.016080781 0.957820828 1.100963988 1.2447791 1.404069094 1.074379415 0.992076944 1.212174873 1 17.76303148 -5.8452622 3.465677768 1.163441567 0.9502178 0.376193165 0.119563057 0.265677276 6.288347598 0.036948244 0.059315569 1.43E-06 5.8452622 -0.213223767 LLIGNRDS(ph)LDNS(ph)Y(ph)Y(ph)DWYILVT(ph)NK ddPTM_A459_MK2206_30min_R1 1 LLIGNRDSLDNSYYDWYILVTNK 23 1 Q8IVG5 Q8IVG5 SAMD9L Sterile alpha motif domain-containing protein 9-like 5 LLIGNRDS(0.998)LDNS(0.998)Y(0.939)Y(0.939)DWY(0.547)ILVT(0.579)NK 44.415 0.045907 0 0 83.093 190.01 186.82 230.94 149.91 262.79 195.19 0 0 TRUE FALSE 0 77.6836306 177.1126506 201.2089088 221.7411708 158.3977747 245.2597586 193.4834744 0 0 0 LLKEGEEPTVY(ph)SDEEEPKDESAR ddPTM_A459_MK2206_30min_R2 1 LLKEGEEPTVYSDEEEPKDESAR 23 2 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 LLKEGEEPT(0.035)VY(0.758)S(0.206)DEEEPKDES(0.001)AR 61.181 0.014148 32027000 30475 35149 39063 36739 40506 29091 77836 26119 47086 38532 TRUE FALSE 32808.18943 33403.55177 40365.34092 33737.30618 38915.53091 30198.07839 67616.0397 29532.84298 51181.45517 37274.704 0.880173037 0.896145326 1.08291513 0.905099238 1.044019851 0.810149382 1.813992667 0.792302549 1.373088172 1 15.18590928 LLKEGEEPTVYS(ph)DEEEPKDESAR ddPTM_A459_MK2206_30min_R1 6 LLKEGEEPTVYSDEEEPKDESAR 23 2 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 LLKEGEEPTVY(0.017)S(0.983)DEEEPKDESAR;LLKEGEEPT(0.001)VY(0.09)S(0.909)DEEEPKDESAR;LLKEGEEPTVY(0.017)S(0.983)DEEEPKDESAR;LLKEGEEPT(0.028)VY(0.431)S(0.541)DEEEPKDESAR;LLKEGEEPT(0.024)VY(0.053)S(0.922)DEEEPKDESAR;LLKEGEEPT(0.004)VY(0.026)S(0.97)DEEEPKDES(0.001)AR 114.1 1.30E-05 392740000 18047.9 20423.1 15533.39 19318.1 17288 14428.12 12999.3 16140.81 12629.16 8184.89 TRUE FALSE 16512.83133 19093.55248 14479.02677 20805.98341 16599.38235 15245.02769 12132.14042 15999.6926 13942.00638 9198.895966 1.795088388 2.075635223 1.573996142 2.261791359 1.804497237 1.657267105 1.318869184 1.739305745 1.515617355 1 13.16724501 -8.674690155 0.276235143 0.849961072 2.021479521 0.600516697 0.215130572 1.908115118 0.412299467 0.765428332 0.390961565 2.11E-09 8.674690155 1.171518449 LLKEGEEPTVYS(ph)DEEEPKDESAR ddPTM_A459_MK2206_30min_R2 6 LLKEGEEPTVYSDEEEPKDESAR 23 2 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 LLKEGEEPT(0.001)VY(0.45)S(0.549)DEEEPKDESAR;LLKEGEEPT(0.005)VY(0.141)S(0.853)DEEEPKDESAR;LLKEGEEPT(0.001)VY(0.01)S(0.99)DEEEPKDESAR;LLKEGEEPT(0.013)VY(0.208)S(0.779)DEEEPKDESAR;LLKEGEEPT(0.031)VY(0.419)S(0.545)DEEEPKDES(0.005)AR;LLKEGEEPT(0.006)VY(0.465)S(0.528)DEEEPKDESAR 113.23 1.41E-05 208228700 181196.5 167613.1 185242.4 155375.8 179233.8 156215.1 327887.9 128093.5 228899.2 181929.9 TRUE FALSE 195069.0434 159289.6772 191418.2892 142681.1001 172196.1804 162159.9751 284835.8249 144835.7603 248808.4387 175993.5423 1.108387506 0.905088193 1.087643823 0.810717815 0.978423289 0.921397302 1.618444752 0.822960652 1.413736183 1 17.42516297 LLKPGEEPS(ph)EYTDEEDTKDHNK ddPTM_A459_MK2206_30min_R2 1 LLKPGEEPSEYTDEEDTKDHNK 22 2 U3KPU8;U3KQM0;O15173;O15173-2 U3KPU8 PGRMC2 Membrane-associated progesterone receptor component 2 1 LLKPGEEPS(0.356)EY(0.288)T(0.356)DEEDTKDHNK 68.088 0.0021219 8116100 96001 30583 42585 29798 27822 24136 78377 37549 29346 51085 TRUE FALSE 103350.9104 29064.29269 44004.76265 27363.40808 26729.56849 25054.51239 68086.00575 42456.78322 31898.46203 49418.10063 2.091357398 0.588130509 0.890458396 0.553712258 0.540886196 0.506990598 1.377754403 0.859134258 0.645481344 1 15.59275194 -4.756648864 24.99926865 0.769268088 2.091359407 0.702484394 0.257255183 84.93395404 443175.0296 0.066424343 0.527899417 1.75E-05 4.756648864 1.322091319 LLKPGEEPSEY(ph)TDEEDTKDHNKQD ddPTM_A459_MK2206_30min_R2 2 LLKPGEEPSEYTDEEDTKDHNKQD 24 3 U3KPU8;U3KQM0;O15173;O15173-2 U3KPU8 PGRMC2 Membrane-associated progesterone receptor component 2 1 LLKPGEEPS(0.025)EY(0.525)T(0.448)DEEDT(0.001)KDHNKQD;LLKPGEEPS(0.053)EY(0.576)T(0.16)DEEDT(0.211)KDHNKQD 59.163 0.0075499 58676000 56977 25717 34469 25716.6 23169.7 20952 52944 26921 32926 37236 TRUE FALSE 61339.20293 24439.93118 35618.17926 23615.47152 22259.94116 21749.34304 45992.3892 30439.66713 35789.84396 36020.99237 1.702873766 0.678491334 0.988817268 0.655603024 0.617971347 0.603796331 1.276821825 0.84505354 0.993582953 1 15.13655031 -4.754716511 24.98310417 0.842764868 1.702875238 0.604447841 0.206607022 161.7019514 600852.1355 0.05284931 0.502004521 1.76E-05 4.754716511 0.86011037 LLKPGEEPSEYT(ph)DEEDTKDHNKQD ddPTM_A459_MK2206_30min_R1 2 LLKPGEEPSEYTDEEDTKDHNKQD 24 3 U3KPU8;U3KQM0;O15173;O15173-2 U3KPU8 PGRMC2 Membrane-associated progesterone receptor component 2 1 LLKPGEEPS(0.108)EY(0.088)T(0.731)DEEDT(0.072)KDHNKQD;LLKPGEEPS(0.046)EY(0.428)T(0.504)DEEDT(0.022)KDHNKQD 57.39 0.0062109 83190000 5512.8 6992 5263.2 5859.6 4461.1 4196.7 4725.1 5065 7144.7 5145.7 TRUE FALSE 5043.907411 6536.819529 4905.948648 6310.907407 4283.40494 4434.313527 4409.8972 5020.717239 7887.417133 5783.188164 0.872167266 1.13031417 0.848312126 1.091250575 0.740664979 0.766759338 0.762537389 0.868157338 1.363852759 1 12.49764933 -8.239185454 24.38602449 1.181926383 0.886010912 0.39007668 0.14850102 517.9863466 567615.8025 0.10188341 0.038435315 5.77E-09 8.239185454 -0.295915471 LLKPGEEPSEYT(ph)DEEDTKDHNKQD ddPTM_A459_MK2206_30min_R2 1 LLKPGEEPSEYTDEEDTKDHNKQD 24 3 U3KPU8;U3KQM0;O15173;O15173-2 U3KPU8 PGRMC2 Membrane-associated progesterone receptor component 2 1 LLKPGEEPS(0.063)EY(0.155)T(0.773)DEEDT(0.01)KDHNKQD 64.377 0.0015514 50702000 129150 60991 84743 54921 48724 45960 132290 55142 62306 89698 TRUE FALSE 139037.8233 57962.27563 87568.28932 50433.77862 46810.85094 47709.04001 114920.1641 62349.24873 67725.26326 86771.16161 1.602350605 0.667990085 1.009186551 0.581227423 0.539474753 0.549825992 1.324405044 0.718548047 0.780504283 1 16.40492802 -4.756241497 24.95873095 0.788629802 1.602351899 0.509339419 0.23707184 135.5093304 650603.5186 0.059920643 0.493566687 1.75E-05 4.756241497 0.813722096 LLLAADPGGS(ph)PAQR ddPTM_A459_MK2206_30min_R1 1 LLLAADPGGSPAQR 14 0 Q5SQI0-7;Q5SQI0-6;Q5SQI0-5;Q5SQI0-4;Q5SQI0-3;Q5SQI0-2;Q5SQI0 Q5SQI0-7 ATAT1 Alpha-tubulin N-acetyltransferase 1 1 LLLAADPGGS(1)PAQR 110.55 0.0042148 4990700 1792.9 1527.3 1580.9 1196.3 1720.9 1468 1992.9 1618.5 1635 1248.9 TRUE FALSE 1640.40444 1427.872492 1473.592913 1288.439233 1652.352909 1551.116891 1859.957277 1604.349625 1804.964101 1403.623161 1.168692913 1.017276241 1.049849385 0.91793814 1.177205503 1.105080719 1.325111561 1.143005951 1.285932116 1 10.45493994 -6.388260876 9.356991954 1.184884938 1.037839979 0.289305235 0.102104476 0.406328841 28.87069111 0.03042659 0.034492572 4.09E-07 6.388260876 -0.147044959 LLLAADPGGS(ph)PAQR ddPTM_A459_MK2206_30min_R2 3 LLLAADPGGSPAQR 14 0 Q5SQI0-7;Q5SQI0-6;Q5SQI0-5;Q5SQI0-4;Q5SQI0-3;Q5SQI0-2;Q5SQI0 Q5SQI0-7 ATAT1 Alpha-tubulin N-acetyltransferase 1 1 LLLAADPGGS(1)PAQR;LLLAADPGGS(1)PAQR;LLLAADPGGS(1)PAQR 133.48 0.00072271 16260900 66470 67797 78300 82539 75585 91492 74638 50331 57143 68396 TRUE FALSE 71558.99431 64430.29957 80910.48292 75795.29967 72617.15312 94973.79217 64837.94094 56909.43451 62113.19485 66164.24412 1.081535734 0.973793329 1.22287323 1.145562844 1.097528644 1.435424729 0.979954382 0.860123701 0.938772832 1 16.01376416 -7.50299463 24.81165297 0.923676718 1.155220538 0.453448094 0.116168113 625.3588083 780333.8119 0.050187591 0.033300963 3.14E-08 7.50299463 0.23154382 LLLAEDS(ph)EEEVDFLSER ddPTM_A459_MK2206_30min_R1 4 LLLAEDSEEEVDFLSER 17 0 Q14676-3;Q14676;Q14676-2;Q14676-4 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER 287.88 1.28E-75 43517100 6231.91 6243.68 5152.59 5243.66 6142.21 6151 5634 4673.1 5057.92 4150.08 TRUE FALSE 5701.853329 5837.215297 4802.846547 5647.527602 5897.552769 6499.264304 5258.16614 4632.243579 5583.708884 4664.223242 1.222465786 1.251487117 1.029720555 1.21081846 1.264423348 1.393429081 1.127340152 0.993143625 1.197135856 1 12.18742113 -7.513879592 24.85297935 1.069132198 1.224760492 0.370213141 0.097936322 480.7237555 1327627.456 0.045500991 0.02804984 3.06E-08 7.513879592 0.155628294 LLLAEDS(ph)EEEVDFLSER ddPTM_A459_MK2206_30min_R2 3 LLLAEDSEEEVDFLSER 17 0 Q14676-3;Q14676;Q14676-2;Q14676-4 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 LLLAEDS(1)EEEVDFLSER;LLLAEDS(0.994)EEEVDFLS(0.006)ER;LLLAEDS(1)EEEVDFLSER 179.81 8.01E-08 21340600 51817 60911 46704 73506 61410 56487 69026 56023 50696 59512 TRUE FALSE 55784.14936 57886.24831 48261.08805 67500.32467 58998.73484 58636.65237 59962.80328 63345.39846 55105.44644 57570.12831 0.968977332 1.005491042 0.83830086 1.172488696 1.024815066 1.01852565 1.04156105 1.100317132 0.957188182 1 15.81303281 -5.754821214 24.99999994 1.047079426 0.94437992 0.344363176 0.067670187 180.9094706 683374.2322 0.017859428 0.030043318 1.76E-06 5.754821214 -0.102699506 LLLAS(ph)PPNER ddPTM_A459_MK2206_30min_R1 1 LLLASPPNER 10 0 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 LLLAS(1)PPNER 134.75 0.002048 20136000 2027.6 2169.3 2125 1523.5 2266.1 2266.7 2068.9 1865.6 1626.9 1519.4 TRUE FALSE 1855.141973 2028.078176 1980.760921 1640.840234 2175.836438 2395.038595 1930.887456 1849.289256 1796.022077 1707.634743 1.086381019 1.187653381 1.159944144 0.96088478 1.274181406 1.402547357 1.130737978 1.082953637 1.051760094 1 10.73778371 -10.66256622 6.635931277 0.999999701 1.153236296 0.126968794 0.116286386 5.50E-07 7.13E-08 0.120256653 0.029166466 2.17E-11 10.66256622 0.153236596 LLLAS(ph)PPNER ddPTM_A459_MK2206_30min_R2 6 LLLASPPNER 10 0 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER 134.75 0.002048 49385600 78494.3 92064 86101.9 94618 92789 91264 96340 73207.3 78054.5 84295.8 TRUE FALSE 84503.88396 87492.23563 88972.49437 86887.40673 89145.63763 94737.11547 83690.44227 82775.74547 84843.53932 81545.23495 1.036282304 1.072928856 1.091081465 1.065511759 1.093204743 1.161773775 1.026306961 1.015089913 1.040447543 1 16.31531296 -7.481363697 24.99864281 1.02080087 1.086381524 0.521150639 0.031193547 415.877314 250424.6436 0.013455333 0.009070525 3.30E-08 7.481363697 0.065580654 LLLATMESMNGGK ddPTM_A459_MK2206_30min_R1 2 LLLATMESMNGGK 13 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 303.71 3.97E-73 19743900 7913.9 8802.7 8162.2 7872.2 8562.5 6722.1 8227.9 7990 4814.4 6557.4 FALSE TRUE 7240.781247 8229.64263 7608.172605 8478.518208 8221.437494 7102.699493 7679.031804 7920.144272 5314.874108 7369.780218 0.982496226 1.116674092 1.032347286 1.150443834 1.115560743 0.963760015 1.041962118 1.074678489 0.721171317 1 12.84740588 -8.235600796 24.86152146 0.860585644 1.061817232 0.475505002 0.083642213 483.5172928 465235.0505 0.0535549 0.020226325 5.81E-09 8.235600796 0.201231588 LLLDIPLQT(ph)PHK ddPTM_A459_MK2206_30min_R1 2 LLLDIPLQTPHK 12 0 P49792;Q99666;O14715;J3KQ37 P49792;Q99666 RANBP2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 LLLDIPLQT(1)PHK;LLLDIPLQT(1)PHK 125.5 0.0038881 9630700 7917.3 7969.9 7268.4 7097.7 6910.5 6295.5 7198.2 6364.9 7801.7 7123.8 TRUE FALSE 7243.89206 7451.058061 6775.041259 7644.366084 6635.240152 6651.94577 6718.021212 6309.25235 8612.714634 8006.350126 0.904768333 0.930643545 0.846208466 0.954787883 0.828747188 0.830833734 0.839086613 0.788031032 1.075735447 1 12.96692899 -8.269871469 24.99990485 1.037867745 0.86665426 0.644372583 0.051246912 443.0795367 1313649.546 0.048145563 0.013246984 5.37E-09 8.269871469 -0.171213485 LLLDIPLQT(ph)PHK ddPTM_A459_MK2206_30min_R2 1 LLLDIPLQTPHK 12 0 P49792;Q99666;O14715;J3KQ37 P49792;Q99666 RANBP2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 LLLDIPLQT(1)PHK 144.4 0.0010106 6572300 43306 46653 45602 43585 44467 42684 41015 30846 35442 40297 TRUE FALSE 46621.54066 44336.27986 47122.34792 40023.96608 42721.00215 44308.36953 35629.68123 34877.67811 38524.6811 38982.11219 1.195972666 1.137349347 1.208819771 1.026726461 1.095912965 1.13663337 0.914000787 0.894709808 0.988265615 1 15.25052464 -7.25769154 24.99920021 0.940469865 1.130593292 0.723080647 0.055758303 173.1347972 1154865.088 0.022597485 0.016830819 5.52E-08 7.25769154 0.190123426 LLLDTS(ph)PPGGVVLSSFR ddPTM_A459_MK2206_30min_R1 1 LLLDTSPPGGVVLSSFR 17 0 A2AB89;O15211 A2AB89 RGL2 Ral guanine nucleotide dissociation stimulator-like 2 1 LLLDT(0.309)S(0.69)PPGGVVLS(0.001)SFR 90.853 0.0087545 6453300 1614.9 1399.7 1473.1 1159.2 1591.5 1596.1 1319.4 1344.8 1120 1192.1 TRUE FALSE 1477.544275 1308.579276 1373.110076 1248.481785 1528.107185 1686.469803 1231.385233 1333.042555 1236.428008 1339.786348 1.102820817 0.976707426 1.02487242 0.931851401 1.140560349 1.258760253 0.919090746 0.994966516 0.92285461 1 10.38778724 LLLERPS(ph)PIRDR ddPTM_A459_MK2206_30min_R2 1 LLLERPSPIRDR 12 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LLLERPS(1)PIRDR 62.528 0.034339 25459000 25420 36638 34197 47856 46146 36480 37119 42071 41862 37545 TRUE FALSE 27366.17474 34818.6102 35337.11091 43946.01172 44334.07617 37868.27196 32245.23071 47569.82415 45503.08109 36319.90972 0.753475847 0.958664558 0.972940494 1.20997029 1.220654911 1.042631225 0.887811422 1.30974511 1.25284125 1 15.148473 -4.960859007 1.272956747 1.131631054 0.674248172 0.458338668 0.126023947 1.001408383 1.780664709 0.04069255 0.552968312 1.09E-05 4.960859007 -0.457382882 LLLEY(ph)TDSS(ph)Y(ph)VEK ddPTM_A459_MK2206_30min_R2 1 LLLEYTDSSYVEK 13 0 A0A3B3IRM5;Q5T8R1;P46439 A0A3B3IRM5 GSTM5 Glutathione S-transferase Mu 5 3 LLLEY(0.693)T(0.249)DS(0.319)S(0.739)Y(1)VEK 95.183 0.018823 8348200 39196 42347 41807 47484 49887 28939 63462 38904 26909 31015 TRUE FALSE 42196.8759 40244.10956 43200.82451 43604.40531 47928.18572 30040.29392 55129.36317 43988.88638 29249.49618 30002.98309 1.40642268 1.341336941 1.439884307 1.453335663 1.597447346 1.001243571 1.837462728 1.466150424 0.974886267 1 14.87281833 -8.26222111 24.96402354 0.987443065 1.443352059 0.4615339 0.196785716 59.31353049 1893953.372 0.152109731 0.048142199 5.47E-09 8.26222111 0.455908993 LLLS(ph)YGASR ddPTM_A459_MK2206_30min_R1 1 LLLSYGASR 9 0 Q99728-3;Q99728-2;Q99728;A0A087X2H0 Q99728-3 BARD1 BRCA1-associated RING domain protein 1 1 LLLS(0.971)Y(0.002)GAS(0.027)R 76.228 0.037756 4622100 2197.5 1974.1 2062.1 1572.9 2132.2 2010 2277.8 2123.1 1563.5 1648 TRUE FALSE 2010.591085 1845.585731 1922.130397 1694.045031 2047.269959 2123.804463 2125.852118 2104.537961 1726.03142 1852.166682 1.085534636 0.996446891 1.037773985 0.914628822 1.105337861 1.146659469 1.147765014 1.136257326 0.931898536 1 10.85499822 LLMMPS(ph)VNKS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 LLMMPSVNKSSPR 13 1 Q92585 Q92585 MAML1 Mastermind-like protein 1 2 LLMMPS(0.933)VNKS(0.992)S(0.075)PR 77.64 0.019774 8909800 4353 3970.6 3815 3369.5 4260.9 4245.8 4816.6 3613.1 3507.3 3667.7 TRUE FALSE 3982.754491 3712.113218 3556.048429 3629.019474 4091.17933 4486.193527 4495.293402 3581.511048 3871.896386 4122.082366 0.966199638 0.900543194 0.862682526 0.880384998 0.992503052 1.08833185 1.090539442 0.868859651 0.939305924 1 12.00915762 -6.280439735 12.20052789 0.999330713 0.899475392 0.329659193 0.065638672 1.603357392 1027.096921 0.02253338 0.025898117 5.24E-07 6.280439735 -0.09985532 LLNGNHENGDLDPT(ph)SPLENMDYIK ddPTM_A459_MK2206_30min_R1 2 LLNGNHENGDLDPTSPLENMDYIK 24 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73;F8WE35;F5H8I0;F5H2W9;F5H2H9;F5GZ10;F5H502;F5H1K9;F5H6X8;F5H221;F5H592 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 LLNGNHENGDLDPT(0.5)S(0.5)PLENMDYIK;LLNGNHENGDLDPT(0.5)S(0.5)PLENMDYIK 130.52 1.57E-07 6684900 2277.9 1989.53 1851.72 1526.8 1582.16 1912.41 2029.33 1656.02 2379.9 2085.19 TRUE FALSE 2084.152643 1860.011235 1726.030406 1644.394401 1519.139217 2020.689002 1893.957098 1641.541592 2627.299122 2343.51908 0.889326083 0.793682992 0.736512205 0.701677411 0.648229933 0.862245594 0.808167988 0.700460093 1.121091415 1 11.19446083 -8.261994258 24.99999947 1.060545734 0.765714098 0.704781777 0.07584754 27.09845354 1220754.835 0.062363858 0.019787531 5.47E-09 8.261994258 -0.294831636 LLNGNHENGDLDPTS(ph)PLENMDYIK ddPTM_A459_MK2206_30min_R2 1 LLNGNHENGDLDPTSPLENMDYIK 24 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73;F8WE35;F5H8I0;F5H2W9;F5H2H9;F5GZ10;F5H502;F5H1K9;F5H6X8;F5H221;F5H592 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 LLNGNHENGDLDPT(0.115)S(0.884)PLENMDYIK 103.42 0.00016298 0 2720.3 3235 3245.8 2678.4 2746.9 2848 2109.6 3430.8 1296.1 3114.1 TRUE FALSE 2928.56826 3074.354604 3354.013352 2459.566152 2639.042904 2956.382636 1832.606986 3879.21734 1408.832435 3012.487172 0.972142981 1.020536994 1.113370169 0.816456971 0.87603457 0.981376008 0.60833686 1.287712484 0.467664211 1 11.55673938 -5.767094821 24.99943649 0.869425129 1.033868748 0.122415745 0.211490819 284.5122106 1257670.332 0.054546223 0.083494707 1.71E-06 5.767094821 0.164443619 LLPAAS(ph)SDAESGTGSSDREPPR ddPTM_A459_MK2206_30min_R2 3 LLPAASSDAESGTGSSDREPPR 22 1 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 LLPAAS(0.5)S(0.5)DAESGTGSSDREPPR;LLPAAS(0.5)S(0.5)DAESGTGSSDREPPR;LLPAAS(0.5)S(0.5)DAESGTGSSDREPPR 93.404 0.00015155 28940400 43681.2 49344 45329 55938 52376 49342 56901 40403 46636 47388 TRUE FALSE 47025.46626 46893.64871 46840.24624 51367.68646 50319.45507 51219.74439 49429.83035 45683.81082 50692.31498 45841.73344 1.025822165 1.022946673 1.021781742 1.120544155 1.097677843 1.117316919 1.078271406 0.996555047 1.105811477 1 15.48437398 -5.723595273 24.92619219 1.076597998 1.023459743 0.233784739 0.041439923 231.1418961 152240.9521 0.011395902 0.019737773 1.89E-06 5.723595273 -0.053138255 LLPAASS(ph)DAESGTGSSDREPPR ddPTM_A459_MK2206_30min_R2 1 LLPAASSDAESGTGSSDREPPR 22 1 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 LLPAAS(0.227)S(0.762)DAES(0.004)GT(0.004)GS(0.001)S(0.001)DREPPR 54.964 0.014526 5404000 5912.8 6810.4 6709.9 6339 7434.7 7023 6091.9 6710.5 7467.7 5693.8 TRUE FALSE 6365.488514 6472.205439 6933.604717 5821.083423 7142.776322 7290.265186 5292.026212 7587.585391 8117.227047 5508.011772 1.155678088 1.175052942 1.258821695 1.056839321 1.296797577 1.323574729 0.960787019 1.377554316 1.473712727 1 12.42731593 -6.30095625 24.99690507 1.247959751 1.169503437 0.053184558 0.155147364 1806.603192 1142786.219 0.048463985 0.054953962 5.00E-07 6.30095625 -0.078456314 LLPDPGS(ph)PR ddPTM_A459_MK2206_30min_R1 2 LLPDPGSPR 9 0 A6ND36 A6ND36 FAM83G Protein FAM83G 1 LLPDPGS(1)PR;LLPDPGS(1)PR 102.05 0.01648 21834000 12544.1 12023.8 11661.5 10228.3 12703.1 10855.6 13312.8 13013.6 9993.1 9940.5 TRUE FALSE 11477.15842 11241.04843 10869.94987 11016.08544 12197.10863 11470.23469 12424.7274 12899.82347 11031.91851 11172.00419 1.027314189 1.006180113 0.972963283 0.986043798 1.091756539 1.02669445 1.112130572 1.154656161 0.987461007 1 13.4476004 -6.256527704 24.9279054 1.070578869 0.996903393 0.274992097 0.049761192 473.308373 2402147.792 0.014733661 0.018437679 5.54E-07 6.256527704 -0.073675476 LLPDPGS(ph)PR ddPTM_A459_MK2206_30min_R2 4 LLPDPGSPR 9 0 A6ND36 A6ND36 FAM83G Protein FAM83G 1 LLPDPGS(1)PR;LLPDPGS(1)PR;LLPDPGS(1)PR;LLPDPGS(1)PR 117.09 0.0076419 25689400 147877 184944 175286 182014 201583 193965 187590 147716 199742 192299 TRUE FALSE 159198.5768 175759.9499 181129.9478 167142.874 193667.8385 201346.474 162959.2077 167022.9884 217115.1981 186024.2994 0.855794524 0.944822534 0.973689719 0.89850022 1.041088929 1.082366522 0.876010329 0.897855758 1.167133535 1 17.50513156 -3.001178335 0.541203819 0.999045958 3.49E-09 0.215925117 0.08407125 44.48822407 2.103434006 0.04407171 42.477656 0.00099729 3.001178335 -0.999045954 LLPEGEETLES(ph)DDEKDEHTSK ddPTM_A459_MK2206_30min_R1 2 LLPEGEETLESDDEKDEHTSK 21 1 Q8N6N3 Q8N6N3 C1orf52 UPF0690 protein C1orf52 1 LLPEGEETLES(0.999)DDEKDEHTSK;LLPEGEET(0.002)LES(0.998)DDEKDEHTSK 116.45 4.21E-05 24430000 4891 2725.3 4275.3 2451.8 4795.7 4178.2 4573.1 4183.8 2564.5 2567.3 TRUE FALSE 4474.994766 2547.882475 3985.104548 2640.638061 4604.677114 4414.766073 4268.036843 4147.221478 2831.088952 2885.356506 1.55093305 0.883039052 1.381148062 0.915186063 1.59587805 1.530059133 1.479206065 1.437334163 0.98119208 1 11.49453387 -2.530398147 15.97901218 1.291216048 42.81718274 0 0.277673378 0 0 0.06228488 0 0.002948505 2.530398147 41.52596669 LLPEGEETLES(ph)DDEKDEHTSK ddPTM_A459_MK2206_30min_R2 4 LLPEGEETLESDDEKDEHTSK 21 1 Q8N6N3 Q8N6N3 C1orf52 UPF0690 protein C1orf52 1 LLPEGEET(0.01)LES(0.989)DDEKDEHTSK;LLPEGEET(0.001)LES(0.994)DDEKDEHT(0.001)S(0.003)K;LLPEGEET(0.1)LES(0.899)DDEKDEHTSK;LLPEGEET(0.033)LES(0.958)DDEKDEHT(0.004)S(0.005)K 86.761 0.00043053 63768600 136280 240760 213449 264365 293381 216705 361583 228905 240656 349209 TRUE FALSE 146713.7016 228804.2085 220565.2831 242765.5338 281861.3878 224951.8606 314106.7178 258823.6694 261587.8239 337814.3389 0.434302765 0.677307568 0.652918653 0.718635966 0.834367744 0.665903826 0.92982056 0.766171354 0.77435382 1 18.36587104 -3.90005245 0.242661881 0.922627943 5.69E-36 0.678758287 0.085021809 10.27702294 0.367655718 0.121142456 3.043741418 0.000125877 3.90005245 -0.922627943 LLPET(ph)VSPSAPSWR ddPTM_A459_MK2206_30min_R2 1 LLPETVSPSAPSWR 14 0 B0QXZ6;O95503 B0QXZ6 CBX6 Chromobox protein homolog 6 1 LLPET(0.755)VS(0.232)PS(0.013)APSWR 129.54 0.0024432 2389000 8451.2 10017 10460 11828 9039.3 11408 12421 8616.7 8310.6 8402.7 TRUE FALSE 9098.23037 9519.570346 10808.73118 10861.61456 8684.371663 11842.13943 10790.10778 9742.932276 9033.440966 8128.520587 1.119297204 1.171131972 1.3297292 1.336235105 1.06838281 1.456862821 1.327438082 1.198610765 1.111326578 1 12.98877709 -10.47884689 8.80513999 1.000000826 1.242512776 0.261976554 0.118018887 4.96E-10 0 0.116341799 0.028217031 3.32E-11 10.47884689 0.24251195 LLPETVS(ph)PSAPSWR ddPTM_A459_MK2206_30min_R2 1 LLPETVSPSAPSWR 14 0 B0QXZ6;O95503 B0QXZ6 CBX6 Chromobox protein homolog 6 1 LLPET(0.398)VS(0.427)PS(0.175)APSWR 171.26 1.09E-07 0 8483.2 9716.2 8088.1 10006 8159.2 10736 10359 8351.7 9390.3 8685.7 TRUE FALSE 9132.680314 9233.707637 8357.753217 9188.477792 7838.828811 11144.566 8998.850857 9443.295866 10207.05132 8402.28632 1.086928006 1.098951795 0.994699883 1.093568755 0.932939978 1.326373034 1.071000263 1.123895986 1.214794513 1 13.03656623 -6.736819823 24.99979774 1.150193205 1.044915943 0.242985714 0.093191252 332.5382661 337673.2313 0.02923202 0.029219627 1.83E-07 6.736819823 -0.105277262 LLPLEEHYR ddPTM_A459_MK2206_30min_R1 1 LLPLEEHYR 9 0 Q9NZN4;C9JIJ3;C9IZH1;C9JC03;Q9NZN3-2;Q9NZN3;A0A024R571;Q9H4M9 Q9NZN4;A0A024R571 EHD2;EHD1;EHD3 EH domain-containing protein 2;EH domain-containing protein 3;EH domain-containing protein 1 0 141.52 0.0030902 5728400 488 475.69 609.16 594.17 434.55 650.68 770.38 515.01 401.72 628.59 FALSE TRUE 446.4930374 444.7224945 567.8119164 639.9330764 417.2409533 687.5209393 718.9893558 510.5073219 443.4802316 706.4644748 0.632010601 0.629504399 0.803737395 0.905824849 0.590604295 0.973185438 1.017728961 0.722622779 0.627745976 1 9.464473205 -5.287518119 4.772819226 0.827409916 0.62831972 0.241867924 0.14159776 0.271350083 16.67054323 0.038256893 0.089788466 5.16E-06 5.287518119 -0.199090197 LLPLEEHYR ddPTM_A459_MK2206_30min_R2 1 LLPLEEHYR 9 0 Q9NZN4;C9JIJ3;C9IZH1;C9JC03;Q9NZN3-2;Q9NZN3;A0A024R571;Q9H4M9 Q9NZN4;A0A024R571 EHD2;EHD1;EHD3 EH domain-containing protein 2;EH domain-containing protein 3;EH domain-containing protein 1 0 169.44 0.00098568 2384100 882.2 1302.5 1016.7 2034 881.09 2024 2226.7 718.5 1545.5 690.55 FALSE TRUE 949.7419103 1237.819744 1050.596271 1867.815694 846.4939795 2101.024738 1934.331615 812.410417 1679.924796 668.0174101 1.421732272 1.852975275 1.572707919 2.796058404 1.26717353 3.145164642 2.895630542 1.216151562 2.514791937 1 9.383741893 -5.656276262 18.65960379 2.169552015 1.639267027 0.090079499 0.719685778 4.68118556 811.5137307 0.189533837 0.328282491 2.21E-06 5.656276262 -0.530284988 LLPPVGTGRS(ph)PR ddPTM_A459_MK2206_30min_R1 2 LLPPVGTGRSPR 12 1 Q9NWZ5;Q9NWZ5-3;Q9NWZ5-2;Q9NWZ5-4 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 1 LLPPVGT(0.06)GRS(0.94)PR;LLPPVGTGRS(1)PR 136.33 0.00077868 26440000 9076.3 8309.5 8768.7 8175.4 10113.7 8323.2 8445.5 9459.5 6677.5 5129 TRUE FALSE 8304.313023 7768.55004 8173.505075 8805.070725 9710.849913 8794.452391 7882.116105 9376.796589 7371.650021 5764.419242 1.440615728 1.34767263 1.417923425 1.527486179 1.684618954 1.525644132 1.367373845 1.626668047 1.278819203 1 12.49295955 -8.547444289 4.832676891 1.000212127 1.488550101 0.698592941 0.101258801 0.103651902 9.632276061 0.104329936 0.027161633 2.84E-09 8.547444289 0.488337973 LLPPVGTGRS(ph)PR ddPTM_A459_MK2206_30min_R2 4 LLPPVGTGRSPR 12 1 Q9NWZ5;Q9NWZ5-3;Q9NWZ5-2;Q9NWZ5-4 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 1 LLPPVGT(0.034)GRS(0.966)PR;LLPPVGT(0.123)GRS(0.877)PR;LLPPVGT(0.001)GRS(0.999)PR;LLPPVGTGRS(1)PR 145.61 0.00037311 35293600 75583.6 131476 112441 133417 149807 158657 141079 95084.1 125001 99938.2 TRUE FALSE 81370.33853 124947.093 116189.7268 122516.4043 143924.8245 164694.8033 122555.1578 107511.9183 135873.361 96677.22472 0.841670194 1.292414976 1.201831426 1.267272666 1.488714895 1.70355328 1.267673521 1.112070797 1.40543299 1 16.56088844 -4.358953721 1.529399561 1.333106094 2.00E-14 0.342840715 0.18823793 4.167383402 3.856683058 0.054737161 11.51536754 4.38E-05 4.358953721 -1.333106094 LLPS(ph)PVTCTPK ddPTM_A459_MK2206_30min_R1 2 LLPSPVTCTPK 11 0 Q9BU19-5;H0YCH4;Q9BU19-2;Q9BU19 Q9BU19-5 ZNF692 Zinc finger protein 692 1 LLPS(0.848)PVT(0.148)CT(0.004)PK;LLPS(0.499)PVT(0.499)CT(0.003)PK 113.24 0.0072115 35850000 12599.8 13191.7 12805.3 11881.3 12600.4 10732.2 11871.7 12316.3 11299.9 9660.8 TRUE FALSE 11528.12085 12332.91793 11936.11191 12796.39978 12098.49939 11339.84789 11079.76055 12208.61989 12474.56504 10857.65284 1.061750732 1.135873297 1.099327091 1.17856041 1.11428313 1.044410616 1.020456329 1.124425331 1.148919129 1 13.40642464 -6.633358021 7.439880026 1.072645628 1.122041497 0.199069483 0.049840477 0.418765315 25.94991298 0.016984375 0.01696286 2.33E-07 6.633358021 0.049395869 LLPS(ph)PVTCTPK ddPTM_A459_MK2206_30min_R2 1 LLPSPVTCTPK 11 0 Q9BU19-5;H0YCH4;Q9BU19-2;Q9BU19 Q9BU19-5 ZNF692 Zinc finger protein 692 1 LLPS(0.948)PVT(0.041)CT(0.01)PK 93.623 0.023338 22156000 23088 23748 21334 26959 25110 17172 27749 20593 16807 22097 TRUE FALSE 24855.63503 22568.70885 22045.26491 24756.36346 24124.05523 17825.49249 24105.52297 23284.57581 18268.84248 21375.9767 1.162783595 1.055797785 1.031310299 1.158139523 1.128559203 0.833903065 1.127692236 1.089287106 0.854643637 1 14.38370272 LLPSAPQTLPDGPLAS(ph)PAR ddPTM_A459_MK2206_30min_R2 4 LLPSAPQTLPDGPLASPAR 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 LLPS(0.001)APQT(0.026)LPDGPLAS(0.973)PAR;LLPSAPQTLPDGPLAS(1)PAR;LLPS(0.002)APQTLPDGPLAS(0.997)PAR;LLPSAPQTLPDGPLAS(1)PAR 246.69 1.72E-37 171177000 394658 380724 288812 299233 283484 303230 286018 217439 198383 251375 TRUE FALSE 424873.3199 361817.7998 298440.8479 274784.7067 272352.9938 314769.6301 248463.493 245859.0239 215637.9947 243172.6543 1.747208464 1.487904965 1.227279641 1.129998385 1.119998441 1.294428566 1.02175754 1.01104717 0.886769096 1 17.89162148 -1.522878745 0.411080761 0.999158765 14.3370789 0.876934532 0.086524447 26.5685933 0.345970956 0.0657534 289.478737 0.03 1.522878745 13.33792014 LLPSVWSESEDGAGS(ph)PPPYR ddPTM_A459_MK2206_30min_R1 1 LLPSVWSESEDGAGSPPPYR 20 0 K7EN65;K7EPZ6;A0A0A0MS90;Q9UIS9-4;Q9UIS9-11;Q9UIS9-7;K7EMA9;Q9UIS9-8;Q9UIS9-10;Q9UIS9-2;Q9UIS9-6;Q9UIS9-5;Q9UIS9;Q9UIS9-9;Q9UIS9-12 K7EN65;Q9UIS9-6 MBD1 Methyl-CpG-binding domain protein 1 1 LLPS(0.067)VWS(0.221)ES(0.293)EDGAGS(0.417)PPPY(0.002)R 61.52 0.026094 3009800 780.18 858.67 749.63 551.29 768.64 824.73 645.13 652.5 708.5 522.95 TRUE FALSE 713.8215941 802.7704269 698.7472042 593.7504513 738.0234412 871.4254999 602.0945548 646.7952613 782.1511104 587.7369941 1.214525547 1.365866765 1.188877357 1.010231545 1.255703569 1.482679342 1.024428547 1.100484175 1.330784208 1 9.199026899 -14.18913493 0.238027645 2.45E-13 1.238146524 0.168956498 0.142583397 276.4685075 3.190477343 133.7144425 0.238897234 6.47E-15 14.18913493 1.238146524 LLPVINTMLQLS(ph)PEEK ddPTM_A459_MK2206_30min_R1 2 LLPVINTMLQLSPEEK 16 0 Q99666;O14715;J3KQ37;Q8IWJ2 Q99666;Q8IWJ2 RGPD5;RGPD8;GCC2 RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;GRIP and coiled-coil domain-containing protein 2 1 LLPVINTMLQLS(1)PEEK;LLPVINTMLQLS(1)PEEK 216.26 1.43E-10 21707900 7004.5 8213.3 8172.1 7000.8 5832 5342.9 6595.9 6635.1 6767.3 6603.2 TRUE FALSE 6408.730493 7678.612677 7617.400621 7540.002829 5599.699091 5645.410381 6155.899546 6577.09002 7470.785052 7421.254268 0.863564333 1.03467856 1.026430351 1.016001144 0.754548879 0.760708389 0.82949584 0.886250462 1.00667418 1 12.85744732 -6.236782237 24.95046279 0.859474388 0.991652304 0.256756542 0.091572462 958.8470849 970253.3109 0.028053574 0.036200778 5.80E-07 6.236782237 0.132177916 LLQDFFNGR ddPTM_A459_MK2206_30min_R1 1 LLQDFFNGR 9 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 143.04 0.028643 12188000 3539.5 3407.4 3549.8 3494.6 4106 3059.1 3774.3 3984 2755.2 2926.3 FALSE TRUE 3238.446938 3185.577641 3308.849466 3763.754698 3942.449325 3232.303598 3522.523334 3949.168308 3041.6129 3288.832136 0.984679912 0.96860451 1.006086455 1.144404622 1.198738385 0.982811972 1.071055982 1.200781355 0.924830692 1 11.68335966 -5.589763565 6.918375917 1.084040727 0.979161156 0.181399324 0.085682402 0.310128126 25.86774011 0.022920919 0.040047825 2.57E-06 5.589763565 -0.104879571 LLQDSS(ph)SPVDLAK ddPTM_A459_MK2206_30min_R1 1 LLQDSSSPVDLAK 13 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 LLQDS(0.044)S(0.478)S(0.478)PVDLAK 224.06 4.23E-09 10233000 4429.7 4834.3 4424.3 3781.6 3908.3 3535 3729.8 4245.2 3915.8 3064.3 TRUE FALSE 4052.930754 4519.586191 4123.990843 4072.859487 3752.624135 3735.148645 3480.991847 4208.084664 4322.861423 3443.928618 1.176833553 1.312334456 1.197466992 1.182620181 1.089634702 1.084560413 1.010761904 1.221884984 1.25521226 1 11.74983953 -5.882968692 2.230421908 1.115925731 1.242757276 0.297137413 0.082289369 0.404637272 4.095278967 0.026398705 0.045006459 1.31E-06 5.882968692 0.126831545 LLQDSS(ph)SPVDLAK ddPTM_A459_MK2206_30min_R2 3 LLQDSSSPVDLAK 13 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 LLQDS(0.033)S(0.484)S(0.484)PVDLAK;LLQDS(0.001)S(0.499)S(0.499)PVDLAK;LLQDS(0.012)S(0.494)S(0.494)PVDLAK 222.56 7.45E-09 19262000 117428 126871 109518 116372 120567 100417 127282 101523 101744 108280 TRUE FALSE 126418.378 120570.7706 113169.2755 106864.0353 115832.9338 104238.4393 110569.7205 114792.4047 110593.5092 104746.8325 1.206894519 1.151068417 1.080407615 1.020212572 1.105837103 0.995146458 1.055590111 1.095903351 1.055817218 1 16.67654709 -5.134124276 1.950593036 1.051084906 1.21081771 0.702533817 0.034631765 0.232236759 1.47310873 0.009451378 0.051376998 7.34E-06 5.134124276 0.159732804 LLQDSSS(ph)PVDLAK ddPTM_A459_MK2206_30min_R1 1 LLQDSSSPVDLAK 13 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 LLQDS(0.062)S(0.213)S(0.725)PVDLAK 192.4 0.00017878 7596600 3106.7 3232.8 3706.9 2888 3521.3 2787.9 3256.9 3265.4 2362 2812.1 TRUE FALSE 2842.458851 3022.344132 3455.285956 3110.43426 3381.039165 2945.748489 3039.638144 3236.850952 2607.538352 3160.484178 0.899374492 0.956291493 1.09327741 0.984163845 1.069785189 0.932056078 0.961763443 1.024162998 0.825043951 1 11.62592988 -6.822770134 24.99966463 0.950937805 1.002358759 0.118395852 0.070684941 164.4422746 67028.19758 0.024830976 0.021898871 1.50E-07 6.822770134 0.051420953 LLQDSSS(ph)PVDLAK ddPTM_A459_MK2206_30min_R2 1 LLQDSSSPVDLAK 13 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 LLQDS(0.003)S(0.04)S(0.957)PVDLAK 174.59 0.00011958 3043500 23547 23998 22724 25077 21856 19195 26616 18015 18550 24169 TRUE FALSE 25349.77642 22806.29422 23481.60682 23028.12888 20997.82362 19925.47918 23121.28723 20369.62235 20163.44547 23380.36751 1.084233446 0.975446353 1.004330099 0.984934427 0.898096389 0.852231222 0.988918896 0.871227638 0.862409261 1 14.51300999 -6.107676733 3.029402186 0.906504653 1.015711615 0.465152392 0.053209314 0.235159197 4.134230135 0.016115367 0.022162956 7.80E-07 6.107676733 0.109206961 LLQDYFNGR ddPTM_A459_MK2206_30min_R1 2 LLQDYFNGR 9 0 Q53FA3;P34931 Q53FA3 HSPA1L Heat shock 70 kDa protein 1-like 0 ; 156.51 0.011658 130952000 7691.5 7300.1 8118.2 6573.2 8857.7 7727.7 8599.2 8605.4 7283.9 6846.9 FALSE TRUE 7037.297535 6824.862163 7567.159203 7079.469003 8504.879053 8165.235696 8025.563058 8530.163895 8041.087471 7695.145663 0.914511283 0.88690487 0.983367896 0.919991552 1.105226519 1.061089166 1.04293842 1.108512336 1.044955849 1 12.90973292 -6.253013084 24.98995845 1.06503534 0.927471389 0.75977991 0.036927205 290.050495 860205.676 0.010677735 0.013570452 5.58E-07 6.253013084 -0.137563951 LLQNGNS(ph)PAEVAK ddPTM_A459_MK2206_30min_R2 1 LLQNGNSPAEVAK 13 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 LLQNGNS(1)PAEVAK 176.49 0.00010137 6854200 28052 31871 32029 29119 29135 24764 35665 23993 23496 29913 TRUE FALSE 30199.68269 30288.33248 33096.83087 26739.88455 27991.01351 25706.41137 30982.14266 27128.96748 25539.63961 28936.94126 1.043637695 1.046701246 1.14375706 0.924074328 0.967310721 0.888359663 1.070677871 0.937520218 0.88259638 1 14.82062481 -5.773227273 24.99550094 0.95314524 1.074898933 0.498835759 0.057434625 178.5514001 378607.0855 0.016105697 0.024105797 1.69E-06 5.773227273 0.121753693 LLQPGGGPDVGTGAPRPGCS(ph)PR ddPTM_A459_MK2206_30min_R2 4 LLQPGGGPDVGTGAPRPGCSPR 22 1 Q9NXH8 Q9NXH8 TOR4A Torsin-4A 1 LLQPGGGPDVGT(0.046)GAPRPGCS(0.954)PR;LLQPGGGPDVGT(0.001)GAPRPGCS(0.999)PR;LLQPGGGPDVGTGAPRPGCS(1)PR;LLQPGGGPDVGTGAPRPGCS(1)PR 120.38 1.80E-05 112117200 147684 149399 128492 144497 125779 142790 139637 95527 116164 117542 TRUE FALSE 158990.8006 141980.0629 132775.8591 132691.1329 120840.2845 148223.9735 121302.4942 108012.7069 126267.7347 113706.6142 1.398254638 1.248652631 1.167705679 1.166960549 1.062737514 1.303565097 1.066802446 0.949924573 1.110469568 1 16.79495665 -1.522878745 0.250969048 1.013059082 3.25014569 0.613086208 0.082077319 36.39488906 0.495636062 0.109733038 34.41312325 0.03 1.522878745 2.237086608 LLQS(ph)PLCAGCSSDK ddPTM_A459_MK2206_30min_R2 2 LLQSPLCAGCSSDK 14 0 Q9UJX6-2;Q9UJX6 Q9UJX6-2 ANAPC2 Anaphase-promoting complex subunit 2 1 LLQS(1)PLCAGCSSDK;LLQS(1)PLCAGCSSDK 143.28 0.00053922 19867900 116944 119580 114096 120913 131761 99408 146901 107085 94193 123650 TRUE FALSE 125897.3226 113641.8311 117899.9037 111034.0211 126587.4011 103191.0411 127612.7222 121081.3772 102385.7369 119615.3106 1.05251846 0.950060912 0.985658969 0.928259272 1.058287609 0.862690909 1.066859431 1.012256513 0.855958458 1 16.86804254 -4.752179981 24.74973391 0.971065904 1.052518642 0.117839195 0.068410025 731.0615863 1953915.118 0.015992602 0.194908751 1.77E-05 4.752179981 0.081452738 LLQTCFS(ph)SPADDSMDR ddPTM_A459_MK2206_30min_R1 4 LLQTCFSSPADDSMDR 16 0 Q9NZL4-2;Q9NZL4;Q9NZL4-3 Q9NZL4-2 HSPBP1 Hsp70-binding protein 1 1 LLQT(0.011)CFS(0.869)S(0.119)PADDSMDR;LLQTCFS(0.538)S(0.462)PADDSMDR;LLQT(0.001)CFS(0.515)S(0.484)PADDSMDR;LLQT(0.075)CFS(0.462)S(0.462)PADDS(0.001)MDR 323.02 1.15E-117 49513300 7045 6617 7044.9 6589.7 7221.4 6025.2 7326.2 6517 5341.38 5274.17 TRUE FALSE 6445.785755 6186.232097 6566.711816 7097.239836 6933.756346 6366.341617 6837.482565 6460.022556 5896.635565 5927.573998 1.08742392 1.043636419 1.10782452 1.197326231 1.169746063 1.07402145 1.153504379 1.089825713 0.994780591 1 12.53322605 -8.181599098 3.653244765 0.995449668 1.119092679 0.547944889 0.043456131 0.194856303 4.732603476 0.038591589 0.01247004 6.58E-09 8.181599098 0.123643011 LLQTCFS(ph)SPADDSMDR ddPTM_A459_MK2206_30min_R2 4 LLQTCFSSPADDSMDR 16 0 Q9NZL4-2;Q9NZL4;Q9NZL4-3 Q9NZL4-2 HSPBP1 Hsp70-binding protein 1 1 LLQTCFS(0.727)S(0.273)PADDSMDR;LLQT(0.001)CFS(0.911)S(0.086)PADDS(0.002)MDR;LLQT(0.014)CFS(0.46)S(0.46)PADDS(0.066)MDR;LLQTCFS(0.927)S(0.073)PADDSMDR 300.56 4.89E-88 12272600 74397.3 86102.4 77296.3 91127.8 93948.6 84510.8 98632.3 67924.4 85743.2 86889.8 TRUE FALSE 80093.21449 81826.68002 79873.32006 83682.36724 90259.70591 87726.91771 85681.76053 76802.3523 93200.98855 84054.59294 0.952871362 0.973494454 0.950255272 0.99557162 1.073822414 1.043689757 1.019358461 0.913719877 1.108814941 1 16.35903903 -5.971656131 5.712490688 1.023819039 0.961573691 0.282817428 0.048156993 0.249257068 23.79329747 0.013756795 0.020202784 1.07E-06 5.971656131 -0.062245349 LLQTCFSS(ph)PADDSMDR ddPTM_A459_MK2206_30min_R1 1 LLQTCFSSPADDSMDR 16 0 Q9NZL4-2;Q9NZL4;Q9NZL4-3 Q9NZL4-2 HSPBP1 Hsp70-binding protein 1 1 LLQT(0.077)CFS(0.23)S(0.693)PADDSMDR 93.738 0.037058 5313800 1354.3 1075.5 1333.4 1141.7 1332.7 1115 1235.3 1021.3 822.33 1027.7 TRUE FALSE 1239.109673 1005.484755 1242.892523 1229.633932 1279.615737 1178.130336 1152.895391 1012.370882 907.8141462 1155.019235 1.072804362 0.870535074 1.076079502 1.064600394 1.107873963 1.020009279 0.998161205 0.876496989 0.785973185 1 10.17370116 -7.691653639 3.583585187 0.871330655 1.0326786 0.415201539 0.077798569 0.21597722 5.4926567 0.04217171 0.021707848 2.03E-08 7.691653639 0.161347946 LLQTCFSS(ph)PADDSMDR ddPTM_A459_MK2206_30min_R2 1 LLQTCFSSPADDSMDR 16 0 Q9NZL4-2;Q9NZL4;Q9NZL4-3 Q9NZL4-2 HSPBP1 Hsp70-binding protein 1 1 LLQT(0.027)CFS(0.209)S(0.765)PADDSMDR 96.096 0.031648 4201100 29077 44500 36149 36961 40152 30597 39724 32675 30447 40996 TRUE FALSE 31303.15748 42290.19471 37354.18962 33941.16807 38575.43073 31761.39028 34508.19108 36945.73469 33095.22502 39658.30388 0.789321641 1.06636418 0.941900837 0.855840133 0.97269492 0.800876164 0.870137845 0.931601483 0.834509341 1 15.27533536 -5.666437632 8.646260043 0.890573387 0.946553455 0.02983871 0.085028451 0.699341492 56.93056912 0.021823087 0.037847659 2.16E-06 5.666437632 0.055980068 LLQTCFSSPADDS(ph)MDR ddPTM_A459_MK2206_30min_R1 2 LLQTCFSSPADDSMDR 16 0 Q9NZL4-2;Q9NZL4;Q9NZL4-3 Q9NZL4-2 HSPBP1 Hsp70-binding protein 1 1 LLQTCFSSPADDS(1)MDR;LLQTCFSSPADDS(1)MDR 263.15 2.38E-39 8917500 3511.2 3350.6 3501.8 3144.8 3626.8 3605.3 3458.8 3180.5 2879.8 2593.7 TRUE FALSE 3212.554002 3132.475331 3264.107573 3387.013041 3482.336876 3809.42897 3228.069763 3152.693224 3179.165515 2915.027137 1.102066585 1.074595598 1.119752036 1.161914755 1.194615594 1.306824531 1.107389266 1.081531346 1.090612665 1 11.5092936 -8.276129282 1.318264538 1.011620548 1.154761478 0.357294294 0.062797905 0.51802443 1.78006672 0.066148957 0.020821173 5.30E-09 8.276129282 0.14314093 LLRPLS(ph)PVTPPPPNSGSK ddPTM_A459_MK2206_30min_R2 1 LLRPLSPVTPPPPNSGSK 18 1 E7EWN3;Q9C0A6;Q9C0A6-2;Q9C0A6-3;H0Y3R4;H7C1F2 E7EWN3 SETD5 SET domain-containing protein 5 1 LLRPLS(0.907)PVT(0.093)PPPPNSGSK 59.975 0.028 5544300 16118 18128 17136 20272 19448 18374 21337 15151 13778 21180 TRUE FALSE 17352.00647 17227.78988 17707.30569 18615.71275 18684.3738 19073.23545 18535.42627 17131.28772 14976.38554 20488.89833 0.846897973 0.840835344 0.864239033 0.908575583 0.911926717 0.930905856 0.904657047 0.836125371 0.730951235 1 14.32255479 -5.525333823 5.912840117 0.885695188 0.845613297 0.070690043 0.06566005 0.488898869 66.87776345 0.018299177 0.034427278 2.98E-06 5.525333823 -0.040081891 LLS(ph)DPELSATESPLADK ddPTM_A459_MK2206_30min_R1 5 LLSDPELSATESPLADK 17 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 LLS(0.99)DPELS(0.009)AT(0.001)ESPLADK;LLS(0.865)DPELS(0.134)AT(0.001)ESPLADK;LLS(1)DPELSATESPLADK;LLS(1)DPELSATESPLADK;LLS(1)DPELSATESPLADK 323.77 7.03E-119 104733400 8852.31 9195.4 9196.34 7763.16 8320.32 7616.01 9072.22 8178.1 8240.34 7457.82 TRUE FALSE 8099.374549 8596.777789 8572.118063 8361.079928 7988.904036 8047.221905 8467.028757 8106.599734 9096.952831 8381.751045 0.96631056 1.025654155 1.022712082 0.997533795 0.953130676 0.960088395 1.010174212 0.967172574 1.085328445 1 13.03303596 -8.247295348 24.95383351 1.042664231 0.989254089 0.329289409 0.031241989 803.3948271 1417410.063 0.021571309 0.00805557 5.66E-09 8.247295348 -0.053410142 LLS(ph)DPELSATESPLADK ddPTM_A459_MK2206_30min_R2 9 LLSDPELSATESPLADK 17 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 LLS(1)DPELSATESPLADK;LLS(1)DPELSATESPLADK;LLS(1)DPELSATESPLADK;LLS(1)DPELSATESPLADK;LLS(0.999)DPELS(0.001)ATESPLADK;LLS(1)DPELSATESPLADK;LLS(0.999)DPELS(0.001)ATESPLADK;LLS(0.985)DPELS(0.005)AT(0.007)ES(0.002)PLADK;LLS(0.65)DPELS(0.262)AT(0.069)ES(0.018)PLADK 261.59 2.58E-40 43522000 238553.8 277598.4 254375.2 259771.8 249004.9 198014.1 272925.5 225121.6 206984.2 260541 TRUE FALSE 256817.6623 263813.2671 262855.9422 238547.613 239227.7165 205549.6653 237090.054 254545.7661 224987.3116 252039.5685 1.018957713 1.046713691 1.042915379 0.946468899 0.949167299 0.81554522 0.940685843 1.009943667 0.892666627 1 17.94329072 -5.813215881 4.448186234 0.931108595 1.037878623 0.438455296 0.051723051 0.189309169 7.777845557 0.015187689 0.023943406 1.54E-06 5.813215881 0.106770028 LLS(ph)DPELSATESPLADKK ddPTM_A459_MK2206_30min_R1 2 LLSDPELSATESPLADKK 18 1 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 LLS(1)DPELSATESPLADKK;LLS(1)DPELSATESPLADKK 151.58 5.95E-05 82584000 9308.9 10202.5 9938.2 8386.7 7591.7 6200.5 8247.2 8885.9 7905.2 7399.2 TRUE FALSE 8517.129172 9538.315396 9263.622673 9032.645087 7289.306513 6551.566952 7697.044336 8808.211513 8726.973829 8315.868757 1.024201971 1.147001675 1.113969321 1.0861938 0.876553819 0.787839147 0.925585115 1.05920521 1.049436215 1 13.02165127 -6.186827016 7.24889285 0.943596132 1.099278034 0.42845717 0.080670236 0.287538941 24.43277298 0.026942591 0.034853607 6.50E-07 6.186827016 0.155681902 LLS(ph)DPELSATESPLADKK ddPTM_A459_MK2206_30min_R2 4 LLSDPELSATESPLADKK 18 1 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 LLS(1)DPELSATESPLADKK;LLS(0.995)DPELS(0.005)ATESPLADKK;LLS(0.998)DPELS(0.002)ATESPLADKK;LLS(0.992)DPELS(0.008)ATESPLADKK 133.92 0.00021135 30987300 131301 151691 140189 149302 139037 103885 165991 130246 112172 148105 TRUE FALSE 141353.5055 144158.2455 144862.8313 137103.549 133577.7088 107838.4165 144196.1823 147269.5994 121928.5178 143272.346 0.986607042 1.006183325 1.011101133 0.956943561 0.932334205 0.752681306 1.006448113 1.027899686 0.851026183 1 17.12840065 -5.970805605 3.256252514 0.925632474 1.001524099 0.152796088 0.076445045 0.481038863 10.60209276 0.023695089 0.035534286 1.07E-06 5.970805605 0.075891625 LLS(ph)DSLPPSTGTFQEAQSR ddPTM_A459_MK2206_30min_R1 5 LLSDSLPPSTGTFQEAQSR 19 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 LLS(0.968)DS(0.032)LPPSTGTFQEAQSR;LLS(0.95)DS(0.05)LPPSTGTFQEAQSR;LLS(0.988)DS(0.012)LPPSTGTFQEAQSR;LLS(0.982)DS(0.018)LPPSTGTFQEAQSR;LLS(0.998)DS(0.002)LPPSTGTFQEAQSR 228.99 1.42E-23 59986100 7487.79 6879.7 7048.58 6706.08 6680.25 6014.11 6710.68 6856.6 5683.74 6052.41 TRUE FALSE 6850.914141 6431.83028 6570.142028 7222.583444 6414.161497 6354.623711 6263.022782 6796.653469 6274.585112 6802.228244 1.007157345 0.945547554 0.965880854 1.061796691 0.942950055 0.934197366 0.920731054 0.999180449 0.92243084 1 12.7317917 LLS(ph)DSLPPSTGTFQEAQSR ddPTM_A459_MK2206_30min_R2 7 LLSDSLPPSTGTFQEAQSR 19 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 LLS(1)DSLPPSTGTFQEAQSR;LLS(0.997)DS(0.003)LPPSTGTFQEAQSR;LLS(0.972)DS(0.028)LPPSTGTFQEAQSR;LLS(0.975)DS(0.025)LPPSTGTFQEAQSR;LLS(0.979)DS(0.021)LPPSTGTFQEAQSR;LLS(0.999)DS(0.001)LPPSTGTFQEAQSR;LLS(0.997)DS(0.003)LPPSTGTFQEAQSR 211.26 1.26E-16 46232400 151087 198298 198326 196162 197271 184235 189847 152935 182225 170476 TRUE FALSE 162654.3369 188450.8097 204938.0899 180134.9371 189525.1493 191246.192 164919.8609 172924.1296 198074.6011 164913.3821 0.986301626 1.142726001 1.242701394 1.092300302 1.149240571 1.159676611 1.000039286 1.048575485 1.201082645 1 17.33134895 -7.237072114 24.87197567 1.066472292 1.133900354 0.140085376 0.079751741 1492.990531 1523916.142 0.030636766 0.023718212 5.79E-08 7.237072114 0.067428063 LLS(ph)FSPEEFPTLK ddPTM_A459_MK2206_30min_R1 1 LLSFSPEEFPTLK 13 0 Q5JSZ5;A0A1W2PQP5;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 LLS(0.5)FS(0.5)PEEFPTLK 214.42 1.96E-06 22685000 2389.1 2659.6 2515.6 2222.8 2765.7 2271.9 2733.2 2661.9 2535 2044.7 TRUE FALSE 2185.894499 2486.459557 2344.848081 2394.000441 2655.536313 2400.533015 2550.873215 2638.627289 2798.522322 2298.012873 0.951210729 1.08200419 1.020380742 1.041769813 1.15557939 1.044612519 1.110034345 1.148221283 1.217800977 1 11.16617116 -5.124912412 0.533709915 1.125206732 0.926981739 0.313504189 0.06387686 3.679378274 1.040155637 0.039270051 0.434529435 7.50E-06 5.124912412 -0.198224993 LLS(ph)GDSTEKR ddPTM_A459_MK2206_30min_R2 1 LLSGDSTEKR 10 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 LLS(0.998)GDS(0.001)T(0.001)EKR 105.13 0.0228 6606600 32736 45231 38635 35721 30252 22855 31895 29708 26496 29502 TRUE FALSE 35242.29333 42984.89431 39923.07162 32802.48003 29064.15448 23724.76304 27707.14819 33590.9376 28800.57419 28539.35216 1.23486662 1.506162231 1.398877991 1.149377178 1.018388726 0.831299986 0.970840124 1.177004209 1.009153047 1 14.80066497 -5.934139768 2.809090544 1.001716016 1.39494709 0.740576419 0.100054245 0.137281727 2.197523818 0.032001648 0.050124497 1.16E-06 5.934139768 0.393231074 LLS(ph)GSESSSK ddPTM_A459_MK2206_30min_R1 2 LLSGSESSSK 10 0 Q5BKY9-2;Q5BKY9;G3XAI9 Q5BKY9-2 FAM133B Protein FAM133B 1 LLS(0.985)GS(0.011)ES(0.004)SSK;LLS(0.835)GS(0.155)ES(0.008)S(0.002)SK 100.55 0.017302 7878200 4435.2 4486.7 5354.7 4242.8 4848.2 4685.8 4298.3 4613.2 4690.5 4256.7 TRUE FALSE 4057.96295 4194.615015 4991.237883 4569.581191 4655.085928 4951.105947 4011.56825 4572.867279 5178.09426 4784.052132 0.848227159 0.876791243 1.043307586 0.955169606 0.973042475 1.034918895 0.838529376 0.95585649 1.082365768 1 12.2240174 -5.116095364 6.035521301 0.97859775 0.855213046 0.379427606 0.062775574 0.234532232 10.53816094 0.016166627 0.044614719 7.65E-06 5.116095364 -0.123384704 LLS(ph)PLRDTPPPQSLMVK ddPTM_A459_MK2206_30min_R1 2 LLSPLRDTPPPQSLMVK 17 1 A0A669KBI3;F5GXF9;P51825;P51825-3;P51825-2 A0A669KBI3 AFF1 AF4/FMR2 family member 1 1 LLS(0.995)PLRDT(0.005)PPPQSLMVK;LLS(1)PLRDTPPPQSLMVK 96.489 0.0032844 19412600 6089.3 5799.8 6195.6 6289.8 7199.8 6470.7 5841 6149 4668.2 3745.5 TRUE FALSE 5571.373059 5422.231966 5775.059934 6774.241486 6913.01672 6837.065442 5451.357548 6095.239941 5153.476095 4209.520817 1.323517165 1.288087695 1.371904353 1.609266655 1.642233646 1.624190909 1.295006673 1.447965269 1.224242929 1 12.0394403 -8.531739797 1.355546661 0.999224016 1.464534478 0.556972169 0.128565943 0.394445316 1.59387164 0.138217053 0.041766751 2.94E-09 8.531739797 0.465310462 LLS(ph)PLRDTPPPQSLMVK ddPTM_A459_MK2206_30min_R2 1 LLSPLRDTPPPQSLMVK 17 1 A0A669KBI3;F5GXF9;P51825;P51825-3;P51825-2 A0A669KBI3 AFF1 AF4/FMR2 family member 1 1 LLS(0.999)PLRDT(0.001)PPPQSLMVK 90.498 0.0049216 4549400 32100 38245 32004 36311 28965 25932 43701 25858 28591 29693 TRUE FALSE 34557.60068 36345.80891 33070.99739 33344.27515 27827.68856 26918.86043 37963.00621 29237.72938 31077.7935 28724.11984 1.203086496 1.265341083 1.151331967 1.160845844 0.968791689 0.937151794 1.321642105 1.017880776 1.081940671 1 14.80997507 -5.798201207 2.161786545 1.064631371 1.225739579 0.307838756 0.102929944 0.405823979 3.872311792 0.032095798 0.059433459 1.59E-06 5.798201207 0.161108208 LLS(ph)PLSSAR ddPTM_A459_MK2206_30min_R1 6 LLSPLSSAR 9 0 A0A087WZ13;E9PAU2;Q8IY67-2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 LLS(1)PLSSAR;LLS(1)PLSSAR;LLS(1)PLSSAR;LLS(0.987)PLS(0.012)S(0.001)AR;LLS(0.996)PLS(0.004)SAR;LLS(0.999)PLS(0.001)SAR 178.54 0.0015877 344395400 25304.2 23986.9 23636.7 19771.5 24447.6 20609.7 23065.8 21512.9 19515.2 18224.5 TRUE FALSE 23151.94491 22425.34845 22032.30666 21294.30436 23473.80032 21776.6034 21527.12257 21324.81498 21543.87488 20482.28865 1.130339744 1.094865366 1.075676016 1.039644774 1.146053584 1.063191901 1.051011581 1.041134384 1.051829473 1 14.32208931 LLS(ph)PLSSAR ddPTM_A459_MK2206_30min_R2 6 LLSPLSSAR 9 0 A0A087WZ13;E9PAU2;Q8IY67-2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 LLS(0.857)PLS(0.071)S(0.071)AR;LLS(0.994)PLS(0.005)S(0.001)AR;LLS(1)PLSSAR;LLS(0.996)PLS(0.004)SAR;LLS(1)PLSSAR;LLS(0.995)PLS(0.005)S(0.001)AR 144.77 0.0019179 361209000 330036 377654 357058 398530 387969 397318 368274 277155 334113 338203 TRUE FALSE 355303.8099 358900.2515 368962.1355 365968.8242 372735.3877 412438.2149 319919.1814 313380.1101 363173.5448 327167.4638 1.08599983 1.096992492 1.12774703 1.118597858 1.139280121 1.260633347 0.977845345 0.95785842 1.110053978 1 18.31966976 -7.295378888 24.99996651 1.007927616 1.135016833 0.53169631 0.058200652 522.9738806 385222.4528 0.024771791 0.016702121 5.07E-08 7.295378888 0.127089217 LLS(ph)PQQPALQR ddPTM_A459_MK2206_30min_R1 2 LLSPQQPALQR 11 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 LLS(1)PQQPALQR;LLS(1)PQQPALQR 124.48 0.0035592 50675000 3675.8 4138.1 4305.6 3426.8 3807.5 4119.2 3947.3 3369.1 3378.4 3514.4 TRUE FALSE 3363.153908 3868.708938 4013.347868 3690.73273 3655.839212 4352.425544 3683.982819 3339.644314 3729.59677 3949.790404 0.85147655 0.979471957 1.016091351 0.934412298 0.925578028 1.101938356 0.93270337 0.845524439 0.944251818 1 11.94756038 -10.74082269 4.553884316 1.000011194 0.950884244 0.044962024 0.070820484 1.00E-05 1.72E-06 0.070708299 0.017144575 1.82E-11 10.74082269 -0.04912695 LLS(ph)PQQPALQR ddPTM_A459_MK2206_30min_R2 4 LLSPQQPALQR 11 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 LLS(1)PQQPALQR;LLS(1)PQQPALQR;LLS(1)PQQPALQR;LLS(1)PQQPALQR 155.88 0.00054005 109995000 241883 329917 323439 349573 344029 338655 358599 293450 353231 344838 TRUE FALSE 260401.7485 313533.8015 334222.2948 321011.7677 330520.6929 351542.7533 311514.5205 331804.9226 383954.3939 333585.9643 0.780613624 0.939889069 1.001907546 0.962305978 0.99081115 1.05382957 0.933835814 0.994660921 1.150990854 1 18.34769906 -3.992763889 1.007034669 1.012973058 1.45E-12 0.621601828 0.054916826 5.317793856 1.366554312 0.017556512 8.521723103 0.00010168 3.992763889 -1.012973058 LLS(ph)PRPSLLTPTGDPR ddPTM_A459_MK2206_30min_R1 2 LLSPRPSLLTPTGDPR 16 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 LLS(0.721)PRPS(0.219)LLT(0.059)PT(0.001)GDPR;LLS(0.873)PRPS(0.07)LLT(0.054)PT(0.002)GDPR 64.244 0.03237 337910000 13855.9 14252.3 14389.3 12191.6 13886.8 11624.2 12567.4 12995.5 10784.1 9996.8 TRUE FALSE 12677.38294 13324.47268 13412.59441 13130.59914 13333.65935 12282.35216 11729.05168 12881.88171 11905.14579 11235.27906 1.128354968 1.18594942 1.193792726 1.168693637 1.186767083 1.093195113 1.043948407 1.146556454 1.059621726 1 13.45574834 -6.837997584 4.856213465 1.074213375 1.17439779 0.647340073 0.038459322 0.138692393 5.951612366 0.013301138 0.011826857 1.45E-07 6.837997584 0.100184415 LLS(ph)PRPSLLTPTGDPR ddPTM_A459_MK2206_30min_R2 2 LLSPRPSLLTPTGDPR 16 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 LLS(0.822)PRPS(0.161)LLT(0.017)PTGDPR;LLS(0.996)PRPSLLT(0.004)PTGDPR 117.48 0.008725 150973900 91532.8 108125.9 103053.8 128794 111864.8 96864 109238.4 83879.2 103171.9 94819.9 TRUE FALSE 98540.62154 102756.525 106489.5623 118271.1182 107472.4259 100550.2274 94895.26686 94842.49944 112145.6054 91725.93443 1.074294006 1.120255963 1.160953692 1.289396711 1.171668913 1.096202814 1.034552196 1.033976923 1.222616113 1 16.48504208 -6.839495161 4.59258886 1.074687931 1.167807098 0.247624603 0.075282439 0.320493317 12.47093565 0.028139028 0.025034621 1.45E-07 6.839495161 0.093119167 LLS(ph)PSNEK ddPTM_A459_MK2206_30min_R1 2 LLSPSNEK 8 0 Q14694;Q14694-3;Q14694-2;H3BNA1;J3KT19 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 LLS(0.5)PS(0.5)NEK;LLS(0.704)PS(0.296)NEK 110.38 0.012048 27887000 20620.1 21455.9 21183.6 17935.9 19504.8 17021.4 19059.2 18745.9 18598.5 17923.3 TRUE FALSE 18866.25221 20059.11701 19745.71625 19317.32613 18727.88251 17985.13696 17787.79554 18582.00657 20531.88063 20143.77372 0.936579832 0.995797376 0.980239181 0.958972554 0.929710727 0.892838512 0.883041867 0.922468989 1.019266842 1 14.29804636 -3.5740224 14.2066021 0.94777269 0.344635811 0 0.044299686 0 0 0.010827639 0 0.000266672 3.5740224 -0.603136879 LLS(ph)PSNEK ddPTM_A459_MK2206_30min_R2 2 LLSPSNEK 8 0 Q14694;Q14694-3;Q14694-2;H3BNA1;J3KT19 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 LLS(0.636)PS(0.364)NEK;LLS(0.707)PS(0.293)NEK 126.39 0.0048488 31693000 289910 298200 291000 305100 304780 251220 308270 259750 256680 309550 TRUE FALSE 312105.7325 283391.8216 300701.7948 280172.354 292812.8058 260780.3531 267793.7787 293700.2169 279005.5624 299449.4089 1.042265315 0.946376293 1.004182295 0.935625003 0.977837315 0.870866148 0.894287218 0.98080079 0.931728546 1 18.19195276 -1.522878843 0.662487962 0.937840641 10.11721876 0.298445328 0.041784537 293.3879847 1.805488567 0.017324298 3960.580701 0.029999993 1.522878843 9.179378123 LLS(ph)PYSPQTQETDSAVQK ddPTM_A459_MK2206_30min_R2 1 LLSPYSPQTQETDSAVQK 18 0 Q9P265 Q9P265 DIP2B Disco-interacting protein 2 homolog B 1 LLS(0.996)PYS(0.004)PQTQETDSAVQK 198.51 1.68E-21 0 10835 10664 8941.9 11426 9762.4 9172.4 11628 7915 11761 11104 TRUE FALSE 11664.53593 10134.44127 9240.018483 10492.45925 9379.079124 9521.462109 10101.22963 8949.517676 12783.95052 10741.67739 1.08591382 0.943469153 0.860202569 0.976798955 0.873148465 0.886403656 0.940377305 0.8331583 1.190126091 1 13.39093168 -8.260311832 24.99987795 1.095063044 0.922627226 0.419280803 0.080051449 89.54294811 1985466.18 0.059346343 0.01952594 5.49E-09 8.260311832 -0.172435818 LLS(ph)WSDNWR ddPTM_A459_MK2206_30min_R1 2 LLSWSDNWR 9 0 J3KSY6;J3KSX6;Q8TCD5 J3KSY6 NT5C "5(3)-deoxyribonucleotidase, cytosolic type" 1 LLS(0.874)WS(0.126)DNWR;LLS(0.875)WS(0.125)DNWR 118.23 0.0072794 57234000 6290.7 5958.8 6127.6 5372.7 6223.8 6410.4 6425.1 5302.5 5497 5094.6 TRUE FALSE 5755.642931 5570.881037 5711.675584 5786.506285 5975.892867 6773.351308 5996.493302 5256.140802 6068.432821 5725.75751 1.00521947 0.97295092 0.9975406 1.010609736 1.043685985 1.182961607 1.047283838 0.917981733 1.059848031 1 12.48325086 -6.06388288 3.168207722 1.044790845 0.990877012 0.11936072 0.061634638 0.594659833 11.74632822 0.020577015 0.028897278 8.63E-07 6.06388288 -0.053913833 LLSFS(ph)PEEFPTLK ddPTM_A459_MK2206_30min_R1 1 LLSFSPEEFPTLK 13 0 Q5JSZ5;A0A1W2PQP5;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 LLS(0.061)FS(0.939)PEEFPTLK 249.33 7.67E-23 19400000 4921 4890.9 5029.5 4004.3 4300.2 4534.2 4610.8 3976.3 3852.2 3606.6 TRUE FALSE 4502.443109 4572.501521 4688.111553 4312.71188 4128.913928 4790.922486 4303.221945 3941.535628 4252.649975 4053.412836 1.110778322 1.128062131 1.156583783 1.063970549 1.018626549 1.181947825 1.061629328 0.972399256 1.049152935 1 11.9849214 -7.527449544 11.1533372 1.009808051 1.107950369 0.500742952 0.046054307 0.158646576 332.6860266 0.021625258 0.012867353 2.97E-08 7.527449544 0.098142318 LLSGPSQES(ph)PQTLGK ddPTM_A459_MK2206_30min_R2 2 LLSGPSQESPQTLGK 15 0 E7EVL6;C9JZE3;C9JYJ8;Q9BWE0;Q9BWE0-4 E7EVL6 REPIN1 Replication initiator 1 1 LLSGPS(0.078)QES(0.919)PQT(0.003)LGK;LLSGPS(0.006)QES(0.992)PQT(0.002)LGK 171.87 4.29E-05 9234600 34076 37720 32764 38466 36344 34572 37853 32570 25412 39674 TRUE FALSE 36684.88476 35846.87965 33856.33541 35323.20475 34916.95195 35887.66169 32882.85563 36827.01083 27622.28983 38379.44063 0.955847302 0.934012561 0.882147703 0.920367889 0.909782722 0.935075163 0.856783087 0.959550484 0.7197158 1 15.22804606 -7.252713755 24.24783804 0.88064155 0.920818677 0.066154506 0.07082454 1239.112889 3443407.563 0.025575048 0.019498289 5.59E-08 7.252713755 0.040177127 LLSLS(ph)TQK ddPTM_A459_MK2206_30min_R2 1 LLSLSTQK 8 0 Q8IZC4-3;Q8IZC4-2;Q8IZC4 Q8IZC4-3 RTKN2 Rhotekin-2 1 LLSLS(0.5)T(0.5)QK 112.11 0.011314 2114500 25798 37188 26883 35854 28136 36397 29510 21658 23615 24673 TRUE FALSE 27773.11472 35341.298 27779.2658 32924.61351 27031.23927 37782.11334 25635.30155 24488.77496 25668.99001 23867.92203 1.163616786 1.480702759 1.163874499 1.379450355 1.132534254 1.582966179 1.07404832 1.026012023 1.075459773 1 14.54278535 -7.488432869 24.75728657 1.040447508 1.313458834 0.492734675 0.136232037 431.9267964 310439.6369 0.052558502 0.035412069 3.25E-08 7.488432869 0.273011326 LLSMPGAQGAAAAGSEPPPAT(ph)TSPEGQPK ddPTM_A459_MK2206_30min_R2 1 LLSMPGAQGAAAAGSEPPPATTSPEGQPK 29 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A2ABF9;A0A0G2JK64;Q96KQ7-3;Q96KQ7 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 LLSMPGAQGAAAAGSEPPPAT(0.333)T(0.333)S(0.333)PEGQPK 56.688 0.0082854 2792400 26822 32500 30009 31887 29833 26219 37889 30665 22844 29470 TRUE FALSE 28875.51294 30886.09726 31009.48508 29281.7301 28661.60652 27216.78242 32914.12879 34673.02079 24830.92983 28508.39631 1.012877491 1.083403532 1.087731654 1.027126527 1.005374213 0.954693562 1.154541575 1.216238908 0.871004091 1 14.79909926 -10.57344593 14.8845519 0.999998709 1.052002489 0.017739631 0.092899777 0 0 0.089363516 0.021673836 2.67E-11 10.57344593 0.052003781 LLSMPGAQGAAAAGSEPPPATTS(ph)PEGQPK ddPTM_A459_MK2206_30min_R2 1 LLSMPGAQGAAAAGSEPPPATTSPEGQPK 29 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A2ABF9;A0A0G2JK64;Q96KQ7-3;Q96KQ7 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 LLSMPGAQGAAAAGSEPPPAT(0.045)T(0.262)S(0.693)PEGQPK 125.35 8.39E-14 4410500 22574 23267 21049 23757 23046 20500 31006 17519 22325 22189 TRUE FALSE 24302.2828 22111.59461 21750.76315 21815.97711 22141.09824 21280.14187 26934.87496 19808.79345 24266.78815 21464.97475 1.132183153 1.030124418 1.013314174 1.01635233 1.031498919 0.991389094 1.254829101 0.922842616 1.130529546 1 14.38969686 LLSS(ph)NEDDANILSSPTDR ddPTM_A459_MK2206_30min_R1 2 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 1 LLS(0.301)S(0.647)NEDDANILS(0.052)SPTDR;LLS(0.315)S(0.685)NEDDANILSSPTDR 191.61 1.92E-10 11003300 2840.4 2459.34 2659.11 2054.27 2649.52 1981.9 1797.7 1655.71 1680.77 1445.08 TRUE FALSE 2598.809064 2299.236519 2478.617022 2212.490231 2543.984008 2094.113465 1677.778713 1641.234302 1855.492056 1624.10742 1.600146045 1.415692392 1.526141061 1.362280723 1.566389006 1.289393447 1.03304664 1.010545412 1.1424688 1 10.66543134 -7.055864632 3.118270425 1.047824085 1.483614066 0.885675722 0.075540621 0.078967801 1.521050494 0.029122235 0.022764358 8.79E-08 7.055864632 0.435789981 LLSS(ph)SLTADCSLR ddPTM_A459_MK2206_30min_R1 1 LLSSSLTADCSLR 13 0 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 LLS(0.004)S(0.91)S(0.086)LTADCSLR 185.2 0.00012538 5587500 824.17 816.54 934.93 753.83 904.1 965.41 1132.9 1221.6 1318.8 1242.4 TRUE FALSE 754.0700136 763.3830976 871.4695565 811.8901172 868.0877825 1020.07068 1057.326308 1210.91968 1455.893979 1396.317892 0.54004179 0.546711535 0.624119738 0.581450773 0.621697815 0.7305433 0.757224637 0.867223493 1.042666565 1 10.44741171 -7.547167095 0.792405103 1.036384658 0.565652666 0.953782207 0.037539308 0.12360179 0.14537889 0.033155498 0.016753362 2.84E-08 7.547167095 -0.470731992 LLSSNEDDANILS(ph)SPTDR ddPTM_A459_MK2206_30min_R1 1 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 1 LLSSNEDDANILS(0.5)S(0.5)PTDR 324.29 2.22E-127 38492000 4557.4 4008.7 4841.2 4089 4634 4800 5220.7 4308.2 4484.2 3776.1 TRUE FALSE 4169.769198 3747.732901 4512.592832 4403.935488 4449.417967 5071.771852 4872.436629 4270.533862 4950.348637 4243.911776 0.982529661 0.883084545 1.063309765 1.037706654 1.048423766 1.195070048 1.148100358 1.006273006 1.166458894 1 12.05117895 -5.565982347 1.38575286 1.099993799 0.928761143 0.412153607 0.069128152 0.446187448 1.610581628 0.022047479 0.070760506 2.72E-06 5.565982347 -0.171232657 LLSSNEDDANILS(ph)SPTDR ddPTM_A459_MK2206_30min_R2 2 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 1 LLS(0.177)S(0.177)NEDDANILS(0.5)S(0.145)PT(0.001)DR;LLSSNEDDANILS(0.499)S(0.499)PT(0.002)DR 248.46 7.66E-33 7439000 16741.3 18696.1 14343.8 21765.8 20607.7 18417.5 21465.2 13144.2 16571.5 20438.9 TRUE FALSE 18023.0268 17767.67886 14822.01513 19987.46451 19798.53815 19118.39087 18646.79346 14862.19207 18012.85912 19771.98037 0.911543835 0.898629198 0.749647474 1.010898461 1.001343203 0.96694365 0.943091846 0.751679488 0.911029587 1 14.27116976 -5.776614018 24.99993915 0.934084015 0.857809012 0.192065244 0.081231561 473.7651857 780518.243 0.02488387 0.03706333 1.67E-06 5.776614018 -0.076275003 LLSSNEDDANILSS(ph)PTDR ddPTM_A459_MK2206_30min_R1 3 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 1 LLSSNEDDANILS(0.009)S(0.991)PTDR;LLSSNEDDANILS(0.079)S(0.92)PTDR;LLSSNEDDANILS(0.002)S(0.997)PT(0.001)DR 345.82 1.06E-163 87947000 8232.1 7737.9 7480.6 6585.18 8578.5 7524.4 7576.4 8169.3 7692.9 6858.3 TRUE FALSE 7531.916667 7234.161304 6972.837714 7092.371705 8236.80018 7950.425026 7070.99218 8097.876671 8492.604484 7707.957982 0.977161096 0.938531492 0.904628402 0.92013627 1.068609896 1.031456716 0.917362575 1.05058651 1.101796936 1 12.91213299 -6.249645342 24.95903543 1.025442185 0.933180828 0.467790667 0.048619662 721.8399847 1527587.761 0.015249976 0.019520893 5.63E-07 6.249645342 -0.092261357 LLSSNEDDANILSS(ph)PTDR ddPTM_A459_MK2206_30min_R2 5 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 1 LLSSNEDDANILS(0.221)S(0.769)PT(0.01)DR;LLSSNEDDANILS(0.237)S(0.746)PT(0.016)DR;LLSSNEDDANILS(0.025)S(0.975)PTDR;LLSSNEDDANILS(0.358)S(0.633)PT(0.01)DR;LLSSNEDDANILS(0.256)S(0.711)PT(0.033)DR 313.59 9.44E-112 39166000 86128.2 103338 92690.4 105154.6 112676.9 108263.6 114406.3 83036.7 90891.7 103123.5 TRUE FALSE 92722.24121 98206.38519 95780.65167 96563.13281 108252.6388 112383.6472 99384.61538 93889.8818 98797.29577 99758.58864 0.929466249 0.984440403 0.960124366 0.967968113 1.085146053 1.126556106 0.996251217 0.941170911 0.990363808 1 16.60615343 -6.039138323 23.55042001 1.024343516 0.961218803 0.273897667 0.050146898 420.3240874 252917.8162 0.01686857 0.021783257 9.14E-07 6.039138323 -0.063124713 LLSSS(ph)LTADCSLR ddPTM_A459_MK2206_30min_R1 2 LLSSSLTADCSLR 13 0 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 LLS(0.001)S(0.057)S(0.885)LT(0.057)ADCSLR;LLSS(0.032)S(0.645)LT(0.323)ADCSLR 167.22 0.00031163 18647500 2935 2657.1 3217.3 2895.1 3732.5 3463.4 4485.5 3769.8 3753.6 4097.4 TRUE FALSE 2685.362838 2484.122307 2998.91864 3118.081104 3583.826621 3659.494715 4186.280479 3736.841036 4143.800152 4605.016846 0.583138548 0.539438267 0.651228593 0.677105255 0.778243976 0.794675641 0.909069526 0.811471741 0.899844733 1 12.16899072 -5.724146698 0.292612637 0.993591428 0.337465801 0.928765852 0.037932998 1.11114668 0.121116952 0.048617898 0.251890552 1.89E-06 5.724146698 -0.656125627 LLSSS(ph)LTADCSLR ddPTM_A459_MK2206_30min_R2 4 LLSSSLTADCSLR 13 0 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 LLS(0.001)S(0.027)S(0.968)LT(0.004)ADCSLR;LLSS(0.036)S(0.961)LT(0.003)ADCSLR;LLSS(0.026)S(0.97)LT(0.004)ADCSLR;LLS(0.03)S(0.181)S(0.76)LT(0.03)ADCSLR 197.38 0.00014317 24231800 92950 104197 93449 102727 101340 112835 135649 102606 111879 141434 TRUE FALSE 100066.3235 99022.7285 96564.54302 94333.87549 97360.88241 117129.015 117838.1234 116016.9565 121610.0332 136819.0202 0.731377285 0.723749727 0.705783033 0.689479251 0.711603418 0.856087223 0.861270043 0.84795927 0.88883865 1 17.06190928 -7.61040728 0.504858951 0.987112256 0.693471917 0.876876893 0.034468471 0.325431987 0.18662287 0.038937341 0.0283598 2.45E-08 7.61040728 -0.293640339 LLSSSLTADCSLRS(ph)PSGR ddPTM_A459_MK2206_30min_R1 1 LLSSSLTADCSLRSPSGR 18 1 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 LLSSSLTADCSLRS(0.869)PS(0.13)GR 204.9 2.10E-10 17471000 1649 1745.6 1938 1482.6 1752.2 1441.8 1726.7 1517.2 1284.3 995.58 TRUE FALSE 1508.743891 1631.961123 1806.45396 1596.790109 1682.406164 1523.43347 1611.514994 1503.93528 1417.807581 1118.919967 1.348393036 1.458514614 1.614462172 1.427081611 1.503598304 1.361521392 1.44024152 1.34409549 1.267121531 1 10.12789113 -8.695041745 0.660852735 0.993929004 1.472766026 0.802947265 0.069042498 0.416869883 0.392778132 0.072461485 0.028148 2.02E-09 8.695041745 0.478837021 LLSSSLTADCSLRS(ph)PSGR ddPTM_A459_MK2206_30min_R2 4 LLSSSLTADCSLRSPSGR 18 1 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 LLSSSLTADCS(0.001)LRS(0.983)PS(0.016)GR;LLSSSLTADCSLRS(0.833)PS(0.167)GR;LLS(0.001)S(0.001)S(0.001)LT(0.007)ADCS(0.02)LRS(0.767)PS(0.202)GR;LLSSSLTADCS(0.004)LRS(0.826)PS(0.171)GR 101.53 0.0013861 31936700 39955.9 62333.4 47762.1 61412.1 65346 62165 59706 49015.6 52046.2 47643.9 TRUE FALSE 43014.95442 59238.014 49354.46458 56394.53498 62780.1877 64530.73264 51866.53048 55422.10722 56573.0844 46089.28344 0.933296229 1.28528824 1.070844693 1.223593225 1.362142846 1.40012445 1.125349031 1.202494443 1.227467215 1 15.49214372 -4.753563492 24.9978715 1.221139412 0.933295707 0.332705795 0.117086868 338.5457008 1074449.709 0.029293111 0.312118857 1.76E-05 4.753563492 -0.287843705 LLSWS(ph)DNWR ddPTM_A459_MK2206_30min_R2 1 LLSWSDNWR 9 0 J3KSY6;J3KSX6;Q8TCD5 J3KSY6 NT5C "5(3)-deoxyribonucleotidase, cytosolic type" 1 LLS(0.392)WS(0.608)DNWR 107.11 0.012777 3871500 10957 16186 10653 19702 16412 16118 15154 13668 15348 12391 TRUE FALSE 11795.87634 15382.22678 11008.1657 18092.28358 15767.58242 16731.38178 13164.2616 15454.45453 16682.9413 11986.68268 0.984081806 1.283276381 0.918366323 1.509365356 1.315425029 1.395830875 1.098240601 1.289302048 1.391789683 1 13.54914483 -5.753439589 24.99985956 1.295777478 1.084045052 0.276945088 0.16398698 242.5372146 757936.2698 0.042808682 0.07249277 1.76E-06 5.753439589 -0.211732427 LLT(ph)PTHSFLAR ddPTM_A459_MK2206_30min_R1 1 LLTPTHSFLAR 11 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LLT(1)PTHSFLAR 143.55 0.0011256 19954000 7006 5961.8 5557.7 4986.2 5623 4216 4789.5 4738.9 4484.7 4337.8 TRUE FALSE 6410.10291 5573.685736 5180.458809 5370.237988 5399.024003 4454.706277 4470.001194 4697.468297 4950.900614 4875.199413 1.314839121 1.143273385 1.062614751 1.101542221 1.107446803 0.913748526 0.916885816 0.963543826 1.015527816 1 12.25124552 -1.522878745 0.410293727 0.961508151 6.954885229 0.781644996 0.053737131 36.74894581 0.479193751 0.041290699 179.4669414 0.03 1.522878745 5.993377078 LLT(ph)PTHSFLAR ddPTM_A459_MK2206_30min_R2 2 LLTPTHSFLAR 11 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LLT(0.986)PT(0.013)HSFLAR;LLT(1)PTHSFLAR 139.19 0.0016117 33244000 87726 81628 69487 86439 80021 82466 75993 61870 63522 85487 TRUE FALSE 94442.37001 77574.47222 71803.6619 79376.6572 76878.97347 85604.30142 66015.02782 69956.62143 69047.02874 82697.56619 1.142021154 0.938050245 0.868268139 0.959842724 0.929640097 1.035148982 0.798270504 0.845933256 0.83493423 1 16.33555725 -7.263810291 24.99503645 0.856945603 0.968850692 0.275949307 0.084605385 283.1752525 2985310.958 0.03394702 0.024113764 5.45E-08 7.263810291 0.111905089 LLTPTHS(ph)FLAR ddPTM_A459_MK2206_30min_R2 1 LLTPTHSFLAR 11 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LLT(0.061)PT(0.115)HS(0.824)FLAR 101.45 0.010093 3218300 15357 17910 14306 14979 13703 17421 17072 12421 15686 15706 TRUE FALSE 16532.74373 17020.61544 14782.9549 13755.16778 13164.95137 18083.96836 14830.42589 14044.46735 17050.33993 15193.51451 1.088144795 1.120255319 0.97297797 0.905331533 0.866484931 1.19024261 0.976102395 0.924372524 1.122211712 1 13.89116801 -5.260971498 24.99599604 0.990560904 1.104200007 0.18236981 0.09239446 66.15842986 3534207.316 0.024363037 0.057140408 5.48E-06 5.260971498 0.113639103 LLVDSQGLSGCS(ph)PR ddPTM_A459_MK2206_30min_R2 2 LLVDSQGLSGCSPR 14 0 O94885;A0A087WW74 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 LLVDSQGLS(0.045)GCS(0.955)PR;LLVDSQGLSGCS(1)PR 137.32 0.00058791 16080300 52924 81327 69214 95386 82620 94872 90869 61844 80609 72613 TRUE FALSE 56975.90213 77288.41944 71521.56021 87592.65868 79375.92367 98482.42044 78937.79115 69927.22314 87620.22511 70243.64376 0.81111826 1.100290579 1.018192628 1.246983414 1.13000863 1.402011843 1.123771304 0.995495384 1.247375854 1 16.10008006 -4.185850854 1.132766618 1.163312793 5.64E-17 0.405194899 0.121086692 5.411145784 2.250300249 0.036779732 10.40142418 6.52E-05 4.185850854 -1.163312793 LLYNS(ph)PEYEASFPR ddPTM_A459_MK2206_30min_R1 4 LLYNSPEYEASFPR 14 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 LLY(0.006)NS(0.982)PEYEAS(0.012)FPR;LLY(0.163)NS(0.794)PEY(0.009)EAS(0.034)FPR;LLYNS(0.967)PEY(0.028)EAS(0.005)FPR;LLYNS(0.532)PEYEAS(0.468)FPR 194.01 0.00011828 32084700 7016.2 7154 7180.4 6251.5 7456.8 7041.9 7167.8 6081.6 5714.5 5184.48 TRUE FALSE 6419.435346 6688.2733 6693.014454 6732.991613 7159.779866 7440.606293 6689.64914 6028.429212 6308.542725 5826.772523 1.10171374 1.147852138 1.148665823 1.155526767 1.228772848 1.276968727 1.148088262 1.034608643 1.082682171 1 12.50848127 -7.687623871 4.691036647 1.043658361 1.177971024 0.60950959 0.049195538 0.15507683 6.326716019 0.027130465 0.014797957 2.05E-08 7.687623871 0.134312663 LLYNS(ph)PEYEASFPR ddPTM_A459_MK2206_30min_R2 2 LLYNSPEYEASFPR 14 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 LLYNS(1)PEYEASFPR;LLYNS(0.991)PEYEAS(0.009)FPR 135.61 0.00090807 0 27155 38476 33720 44677 44131 32855 42045 32030 30580 38682 TRUE FALSE 29234.00768 36565.33779 34844.20797 41026.74619 42398.1952 34105.32005 36524.44099 36216.43098 33239.79312 37419.80951 0.781244161 0.977165257 0.931170106 1.096391102 1.133041449 0.911424203 0.976072339 0.967841137 0.888294023 1 15.19151459 -4.491344028 1.946229766 0.992876408 0.535027678 0.415210997 0.072810372 2.364947389 4.667344383 0.020824198 2.563579663 3.23E-05 4.491344028 -0.45784873 LLYS(ph)AAENQPPR ddPTM_A459_MK2206_30min_R1 1 LLYSAAENQPPR 12 0 Q70JA7 Q70JA7 CHSY3 Chondroitin sulfate synthase 3 1 LLY(0.485)S(0.515)AAENQPPR 78.516 0.043799 15781000 102.85 54.615 193.47 145.67 61.816 191.16 192.58 126.07 0 161.79 TRUE FALSE 94.10206741 51.05955357 180.3377954 156.8895286 59.35373782 201.983314 179.7333396 124.9677833 0 181.8337667 0.517517011 0.280803475 0.991772864 0.86281845 0.326417579 1.110813012 0.988448641 0.687263898 0 1 7.506476324 -5.247961244 24.93612788 0.745655895 0.399160227 0.149517515 0.330827662 1491.572298 2759571.669 0.085118701 0.222425638 5.65E-06 5.247961244 -0.346495668 LMDIS(ph)PFLPEK ddPTM_A459_MK2206_30min_R1 2 LMDISPFLPEK 11 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 LMDIS(1)PFLPEK;LMDIS(1)PFLPEK 116.51 0.0058669 33254000 10755.1 10427.3 9177.1 8783.4 9064 8583 8691.5 8138.9 8275 7709.3 TRUE FALSE 9840.322268 9748.480875 8554.184021 9459.89899 8702.961687 9068.962043 8111.705894 8067.742455 9135.215862 8664.386286 1.135720632 1.125120759 0.987281007 1.091814086 1.004452179 1.046694104 0.936212402 0.931138362 1.054340788 1 13.08088185 -4.012305192 0.441387405 0.981031589 1.414539016 0.505397512 0.048136398 7.89358525 0.713698421 0.033349298 2.060518222 9.72E-05 4.012305192 0.433507426 LMEDLDR ddPTM_A459_MK2206_30min_R1 1 LMEDLDR 7 0 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 0 147.69 0.040354 138070000 6533.5 6687.5 7299.2 6641 7068.3 7102 7290 6428.5 5841.5 5569.4 FALSE TRUE 5977.791516 6252.142534 6803.750641 7152.490971 6786.754644 7504.109103 6803.697401 6372.296302 6448.744829 6259.379319 0.955013462 0.99884385 1.086968898 1.14268374 1.084253613 1.19885834 1.086960393 1.018039645 1.030253081 1 12.61180389 -5.140019571 3.139544873 1.088656483 0.961581983 0.35973913 0.056107411 0.278889645 5.045251516 0.01564334 0.055276092 7.24E-06 5.140019571 -0.1270745 LMELHGEGS(ph)SSGK ddPTM_A459_MK2206_30min_R1 1 LMELHGEGSSSGK 13 0 D6RAT0;P61247;D6RG13;D6R9B6;H0Y9Y4 D6RAT0 RPS3A 40S ribosomal protein S3a 1 LMELHGEGS(0.976)S(0.02)S(0.004)GK 126.71 0.0020008 6976400 2677.9 2647.4 2727.9 1991.9 3034.7 2600.1 2809.2 2379.3 2382.9 2248.9 TRUE FALSE 2450.130543 2475.053779 2542.737748 2145.316483 2913.821473 2747.315415 2621.803394 2358.498031 2630.610982 2527.51071 0.969384831 0.979245615 1.00602452 0.848786308 1.152842384 1.086964895 1.037306542 0.933130776 1.04079123 1 11.30350149 -6.259663179 24.99935207 1.040525482 0.956828146 0.315782226 0.065354129 232.4672539 3271891.983 0.020771399 0.025493435 5.50E-07 6.259663179 -0.083697335 LMELHGEGS(ph)SSGK ddPTM_A459_MK2206_30min_R2 1 LMELHGEGSSSGK 13 0 D6RAT0;P61247;D6RG13;D6R9B6;H0Y9Y4 D6RAT0 RPS3A 40S ribosomal protein S3a 1 LMELHGEGS(0.964)S(0.018)S(0.018)GK 115.1 0.002692 10024000 31513 26977 29422 34027 28461 24024 35659 27069 21567 31348 TRUE FALSE 33925.65951 25637.36141 30402.9148 31246.88525 27343.47813 24938.25015 30976.93047 30607.01124 23442.85868 30325.11733 1.118731352 0.845416726 1.002565447 1.030396187 0.901677571 0.822362858 1.021494167 1.009295724 0.773050881 1 14.88822561 -4.741714407 24.76852817 0.93770534 1.118732052 0.278937757 0.088912869 1740.605512 2185540.591 0.021868587 0.829975842 1.81E-05 4.741714407 0.181026712 LMELHGEGSS(ph)SGK ddPTM_A459_MK2206_30min_R1 1 LMELHGEGSSSGK 13 0 D6RAT0;P61247;D6RG13;D6R9B6;H0Y9Y4 D6RAT0 RPS3A 40S ribosomal protein S3a 1 LMELHGEGS(0.119)S(0.664)S(0.217)GK 75.483 0.04705 8961000 3195 3365.2 3129.4 2607.4 2624.7 2487 3212.4 2649.7 2820.9 2321.9 TRUE FALSE 2923.248472 3146.124868 2916.985047 2808.2224 2520.152641 2627.811791 2998.106657 2626.533952 3114.14265 2609.554501 1.120209779 1.205617613 1.11780959 1.076130963 0.965740566 1.006996324 1.148895973 1.006506647 1.193361797 1 11.34958782 -5.651909795 3.044782882 1.054349575 1.16271235 0.281568988 0.069096244 0.311767405 5.743850207 0.01939434 0.036834063 2.23E-06 5.651909795 0.108362775 LMELHGEGSS(ph)SGK ddPTM_A459_MK2206_30min_R2 2 LMELHGEGSSSGK 13 0 D6RAT0;P61247;D6RG13;D6R9B6;H0Y9Y4 D6RAT0 RPS3A 40S ribosomal protein S3a 1 LMELHGEGS(0.246)S(0.377)S(0.377)GK;LMELHGEGS(0.144)S(0.428)S(0.428)GK 99.796 0.0075746 9104700 106706 127231 112765 145554 124424 109970 146734 106030 111018 129983 TRUE FALSE 114875.4934 120912.8936 116524.5288 133661.7726 119538.4886 114154.9854 127467.6495 119888.4851 120674.145 125741.6654 0.913583362 0.961597679 0.926697833 1.062987135 0.950667293 0.907853297 1.01372643 0.953450749 0.959698956 1 16.94010325 LMELHGEGSSS(ph)GK ddPTM_A459_MK2206_30min_R1 2 LMELHGEGSSSGK 13 0 D6RAT0;P61247;D6RG13;D6R9B6;H0Y9Y4 D6RAT0 RPS3A 40S ribosomal protein S3a 1 LMELHGEGS(0.078)S(0.332)S(0.59)GK;LMELHGEGS(0.023)S(0.134)S(0.843)GK 105.19 0.0048851 19510000 7646.5 6770.4 6942.7 5627.1 7418.9 7606 8988.1 6943.4 6685.8 6052.7 TRUE FALSE 6996.125022 6329.645729 6471.448867 6060.500217 7123.389503 8036.645147 8388.520249 6882.694586 7380.812835 6802.554172 1.028455613 0.930480753 0.951326326 0.890915392 1.047163951 1.181415825 1.233142734 1.01178093 1.085006109 1 12.73186082 -6.486859929 5.738603571 1.111845048 0.950297561 0.490625024 0.072724487 0.1619007 14.93455046 0.023890674 0.026338655 3.26E-07 6.486859929 -0.161547488 LMGS(ph)AGNATIST(ph)VSST(ph)QR ddPTM_A459_MK2206_30min_R1 1 LMGSAGNATISTVSSTQR 18 0 A0A5F9ZHD9;E9PDI6;Q13936-5;F5H522;A0A0A0MSA1;A0A0A0MR67;F5GY28;F5H638;Q13936-8;Q13936-3;Q13936;Q13936-28;Q13936-10;Q13936-7;Q13936-6;Q13936-11;Q13936-18;Q13936-14;Q13936-36;Q13936-33;Q13936-9;Q13936-34;Q13936-4;Q13936-31;Q13936-20;Q13936-30;Q13936-24;Q13936-17;Q13936-19;Q13936-35;Q13936-22;Q13936-21;Q13936-23;Q13936-12;Q13936-27;Q13936-37;Q13936-26;Q13936-15;Q13936-16;Q13936-29;Q13936-25;Q13936-32;Q13936-13;Q13936-2 A0A5F9ZHD9 CACNA1C Voltage-dependent L-type calcium channel subunit alpha-1C 3 LMGS(0.999)AGNAT(0.04)IS(0.04)T(0.671)VS(0.235)S(0.109)T(0.905)QR 67.168 0.039949 0 0 113.38 0 0 0 0 0 0 0 0 TRUE FALSE 0 105.9989414 0 0 0 0 0 0 0 0 0 LMHQAALLGQALQDSR ddPTM_A459_MK2206_30min_R1 2 LMHQAALLGQALQDSR 16 0 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;Q16881-7;E2QRB9;E9PKD3;A0A0B4J225;E9PIZ5 Q16881 TXNRD1 "Thioredoxin reductase 1, cytoplasmic" 0 ; 106.35 0.0049287 13325400 5602.2 4761.8 5766.6 3996 5813.9 5422.6 5848.8 5075.5 4872.4 5144.3 FALSE TRUE 5125.703472 4451.805955 5375.179259 4303.772612 5582.320052 5729.622926 5458.637224 5031.125439 5378.903416 5781.614721 0.886552238 0.769993534 0.929702085 0.744389383 0.965529583 0.991007392 0.944137146 0.870193827 0.930346222 1 12.49725676 -6.287869918 24.93131563 0.945449053 0.835114796 0.482366955 0.059508162 654.1700555 617061.4884 0.017982477 0.020395945 5.15E-07 6.287869918 -0.110334257 LMIEMDGTENK ddPTM_A459_MK2206_30min_R1 2 LMIEMDGTENK 11 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879 P06733 ENO1 Alpha-enolase;Enolase 0 ; 182.64 0.00048953 33467000 7022.7 7502.6 7377.3 7329.9 7716.5 7195.3 7696.8 6555.9 6630.9 6201.5 FALSE TRUE 6425.382487 7014.179376 6876.54943 7894.450168 7409.135465 7602.691668 7183.360516 6498.582457 7320.205784 6969.788639 0.921890579 1.006369022 0.986622376 1.132667083 1.063035889 1.090806632 1.030642518 0.932393046 1.050276581 1 12.76689919 -4.737602554 1.576072417 1.040183172 0.872282874 0.303852362 0.052483598 1.588448537 3.488676556 0.01582957 0.428592645 1.83E-05 4.737602554 -0.167900298 LMIEMDGTENK ddPTM_A459_MK2206_30min_R2 1 LMIEMDGTENK 11 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879 P06733 ENO1 Alpha-enolase;Enolase 0 157.99 0.0078602 2227100 15697 21010 16244 20068 17703 15273 17181 17646 15731 16434 FALSE TRUE 16898.77439 19966.67395 16785.56685 18428.38021 17007.89127 15854.22472 14925.11406 19952.39279 17099.25394 15897.75993 1.062965755 1.255942601 1.055844781 1.159180934 1.069829419 0.997261551 0.938818685 1.255044288 1.075576309 1 13.95653588 -6.337650774 6.093765137 1.059413012 1.136548185 0.141055586 0.093391935 0.510376711 32.45529613 0.029860832 0.033993976 4.60E-07 6.337650774 0.077135173 LMLPDS(ph)PLVEEGR ddPTM_A459_MK2206_30min_R1 1 LMLPDSPLVEEGR 13 0 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 LMLPDS(1)PLVEEGR 91.812 0.019288 2658800 1309.4 1107.4 1098.6 963.77 1065.9 1024.7 895.4 1010.4 767.55 869.54 TRUE FALSE 1198.028654 1035.308059 1024.030093 1037.999732 1023.442946 1082.717628 835.6694997 1001.566179 847.3395692 977.2651799 1.225899253 1.059393172 1.047852839 1.062147464 1.047252032 1.107905664 0.855110278 1.024866331 0.867051837 1 9.932606279 -7.246013569 24.91361917 0.938829304 1.084908951 0.546078549 0.069045323 607.7009729 981475.3365 0.025394576 0.019598514 5.68E-08 7.246013569 0.146079647 LMLPDS(ph)PLVEEGRR ddPTM_A459_MK2206_30min_R1 1 LMLPDSPLVEEGRR 14 1 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 LMLPDS(1)PLVEEGRR 111.78 0.0019632 2012300 957.73 940.35 1021.7 898.1 749.2 741.03 773.6 623.02 508 401.22 TRUE FALSE 876.2700343 879.1330441 952.3498506 967.2718176 719.3577775 782.9864782 721.9945555 617.5730018 560.8084179 450.9261627 1.943267228 1.949616405 2.11198624 2.145078059 1.595289511 1.736396206 1.601136983 1.369565692 1.243681259 1 8.816747407 -7.570696546 0.565805695 1.002992193 2.055586324 0.894902623 0.117315946 0.256556822 0.172568762 0.119765838 0.078727013 2.69E-08 7.570696546 1.052594132 LMLST(ph)SEYSQSPK ddPTM_A459_MK2206_30min_R2 1 LMLSTSEYSQSPK 13 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 LMLS(0.029)T(0.727)S(0.003)EYS(0.033)QS(0.208)PK 123.95 0.0055069 8772600 33913 30022 31141 26504 24578 23787 39317 23244 28038 35006 TRUE FALSE 36509.40535 28531.15114 32179.2254 24338.53842 23612.94423 24692.23095 34154.63067 26282.07061 30476.69456 33863.75709 1.078126248 0.842527634 0.950255617 0.718719378 0.697292511 0.729163952 1.008589525 0.77611207 0.899979718 1 15.04745442 -3.200571393 1.305286383 0.829409478 14.31147898 0.268247703 0.111166267 105.5720043 4.273458967 0.032457688 4035.194039 0.000630128 3.200571393 13.4820695 LMLSTSEYSQS(ph)PK ddPTM_A459_MK2206_30min_R1 2 LMLSTSEYSQSPK 13 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 LMLSTSEYS(0.002)QS(0.998)PK;LMLST(0.002)SEYS(0.007)QS(0.99)PK 228.17 5.83E-13 39082000 11804.4 13655.5 13305.8 11078.3 8504.9 7607 8266 9065.1 11382 10189.7 TRUE FALSE 10800.37379 12766.52447 12402.63937 11931.55259 8166.131824 8037.701766 7714.590222 8985.844786 12565.19963 11452.07696 0.943093015 1.114778089 1.083003494 1.041868005 0.713069939 0.701855374 0.673641144 0.784647607 1.097198322 1 13.48332165 -6.244570484 22.31437299 0.803569084 1.053286527 0.381249371 0.133234985 195.13823 258129.4716 0.040367292 0.051903526 5.69E-07 6.244570484 0.249717443 LMLSTSEYSQS(ph)PK ddPTM_A459_MK2206_30min_R2 1 LMLSTSEYSQSPK 13 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 LMLS(0.03)T(0.466)S(0.01)EYS(0.01)QS(0.482)PK 96.371 0.014238 11348000 32591 32442 28094 25533 25488 18135 34653 22174 22427 30810 TRUE FALSE 35086.19202 30830.97746 29030.63994 23446.87222 24487.21305 18825.14013 30103.01947 25072.21793 24377.65992 29804.67222 1.177204425 1.034434374 0.974029834 0.786684452 0.821589745 0.631617083 1.010010083 0.841217704 0.817914042 1 14.86325089 -5.226427403 1.60096866 0.835650661 1.173281585 0.509192788 0.104574278 0.405604718 1.683769696 0.030455627 0.162815069 5.94E-06 5.226427403 0.337630924 LMMNDNDISSSTS(ph)R ddPTM_A459_MK2206_30min_R1 1 LMMNDNDISSSTSR 14 0 Q9NYK1 Q9NYK1 TLR7 Toll-like receptor 7 1 LMMNDNDISSST(0.084)S(0.916)R 116.9 0.0097991 3264600 223.49 196.29 201.24 109.92 109.02 270.03 215.31 117.84 0 251.27 TRUE FALSE 204.4810019 183.5114853 187.5803895 118.3860574 104.6775025 285.3188652 200.9470628 116.8097373 0 282.3992246 0.724084856 0.64982999 0.664238331 0.419215236 0.370672061 1.010338699 0.711570873 0.41363335 0 1 8.141592317 -5.558590336 24.21990402 0.552536801 0.679476899 0.034768732 0.285202918 498.6072043 338156.8923 0.079906869 0.138403523 2.76E-06 5.558590336 0.126940098 LMMNDNDISSSTS(ph)R ddPTM_A459_MK2206_30min_R2 1 LMMNDNDISSSTSR 14 0 Q9NYK1 Q9NYK1 TLR7 Toll-like receptor 7 1 LMMNDNDISSST(0.233)S(0.767)R 81.327 0.03214 6980000 2691.5 2347.9 2352.8 3281.6 3428.9 3216.7 2658.4 2886 3619 0 TRUE FALSE 2897.563309 2231.3067 2431.241178 3013.482783 3294.264157 3339.113773 2309.348887 3263.210109 3933.774078 0 0 LMPS(ph)PLK ddPTM_A459_MK2206_30min_R1 1 LMPSPLK 7 0 Q8NI77 Q8NI77 KIF18A Kinesin-like protein KIF18A 1 LMPS(1)PLK 81.525 0.042863 9466600 8453.6 9453.7 8876.4 7421.6 6401.9 7108 7580.7 6345.1 9991.5 10468 TRUE FALSE 7734.576928 8838.262412 8273.894699 7993.212918 6146.898767 7510.448817 7075.005335 6289.62546 11030.15218 11764.85487 0.657430713 0.751242791 0.703272143 0.679414494 0.522479779 0.638380065 0.601367838 0.534611394 0.937551062 1 13.5221959 -8.356361387 5.414596147 0.990150167 0.639139812 0.795424736 0.067637945 0.107008389 4.619412578 0.071017876 0.018542121 4.40E-09 8.356361387 -0.351010355 LMPS(ph)PLK ddPTM_A459_MK2206_30min_R2 1 LMPSPLK 7 0 Q8NI77 Q8NI77 KIF18A Kinesin-like protein KIF18A 1 LMPS(1)PLK 81.525 0.042863 13760000 120610 94925 107570 91665 92542 68729 115370 95527 78592 111020 TRUE FALSE 129843.9943 90211.16253 111156.3301 84175.67628 88908.33609 71344.53026 100221.7804 108012.7069 85427.7901 107397.4265 1.209004709 0.839975086 1.034999941 0.783777405 0.827844195 0.664303909 0.933186052 1.005729005 0.7954361 1 16.7125999 -2.730377157 1.544175724 0.866556594 199.9999999 0.422193696 0.113742265 795.7851456 4.273218204 0.031741872 559116.6103 0.001860471 2.730377157 199.1334433 LMPVSLSVQS(ph)PAALTAEK ddPTM_A459_MK2206_30min_R2 2 LMPVSLSVQSPAALTAEK 18 0 P54198 P54198 HIRA Protein HIRA 1 LMPVSLSVQS(1)PAALTAEK;LMPVSLS(0.002)VQS(0.998)PAALTAEK 247.28 8.80E-33 7185900 52564 66782 60578 65644 59151 55865 60478 49513 49731 57169 TRUE FALSE 56588.34025 63465.70299 62597.64029 60280.67522 56828.43453 57990.98172 52537.16595 55984.5191 54056.51249 55303.58021 1.023231046 1.147587602 1.131891282 1.089995891 1.027572434 1.048593626 0.949977664 1.012312745 0.977450506 1 15.75508526 -6.553371332 1.411167416 0.988816131 1.106307145 0.622659901 0.037568546 0.257295232 1.057832803 0.015681979 0.016973997 2.80E-07 6.553371332 0.117491014 LMQLVDHR ddPTM_A459_MK2206_30min_R2 1 LMQLVDHR 8 0 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 116.05 0.013406 4047800 17395 26013 20680 28123 23736 24416 24546 21274 21449 23380 FALSE TRUE 18726.77457 24721.23225 21369.46088 25825.26094 22804.00538 25345.16799 21323.08071 24054.58484 23314.59525 22617.11251 0.827991396 1.0930322 0.944835945 1.141846066 1.008263339 1.120619088 0.942785278 1.063556846 1.030838717 1 14.46512713 -4.75241678 24.99745166 1.039351219 0.827990989 0.490287927 0.064360539 281.4735795 779776.2851 0.014669193 0.175168685 1.77E-05 4.75241678 -0.21136023 LMQNST(ph)SPPLK ddPTM_A459_MK2206_30min_R1 1 LMQNSTSPPLK 11 0 Q9Y2Q0-3;Q9Y2Q0-2;Q9Y2Q0 Q9Y2Q0-3 ATP8A1 Phospholipid-transporting ATPase IA 1 LMQNS(0.07)T(0.465)S(0.465)PPLK 122.52 0.0096559 5334900 1649.4 1438.3 1461.9 1053 1246.2 1079.1 1437.5 1067.4 1203.7 1433.2 TRUE FALSE 1509.109869 1344.666409 1362.670301 1134.102242 1196.561215 1140.197709 1341.606998 1058.067834 1328.828922 1610.755636 0.9368956 0.83480472 0.845982016 0.704080878 0.742857072 0.707865106 0.832905357 0.656876692 0.824972387 1 10.65352193 -4.946076789 1.396194343 0.767180086 0.966912908 0.172509052 0.092968655 1.298834656 2.873600457 0.025489028 0.336990491 1.13E-05 4.946076789 0.199732822 LMS(ph)DVEDVSLENVHTR ddPTM_A459_MK2206_30min_R1 2 LMSDVEDVSLENVHTR 16 0 Q9NSI6-3;Q9NSI6-2;Q9NSI6 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 LMS(1)DVEDVSLENVHTR;LMS(1)DVEDVSLENVHTR 164.56 1.57E-05 3917500 2705 2362.9 2363.7 2560.9 2839.4 2574.3 3127.6 2549.6 2470.1 2130.56 TRUE FALSE 2474.925545 2209.074781 2203.25863 2758.140962 2726.300685 2720.054641 2918.963511 2527.309116 2726.875734 2394.509858 1.03358336 0.922558232 0.920129279 1.15186035 1.13856315 1.135954664 1.219023384 1.055459892 1.138803303 1 11.22551466 -5.763651514 24.99952734 1.127833151 0.955137066 0.579724743 0.06262138 36.24146848 409576.5288 0.016803545 0.026357464 1.72E-06 5.763651514 -0.172696085 LMSLLTSPHQPPPPPPASASPSAVPNGPQS(ph)PK ddPTM_A459_MK2206_30min_R2 1 LMSLLTSPHQPPPPPPASASPSAVPNGPQSPK 32 0 Q96RU3-5;Q96RU3-2;Q96RU3 Q96RU3-5 FNBP1 Formin-binding protein 1 1 LMSLLTSPHQPPPPPPAS(0.003)AS(0.003)PSAVPNGPQS(0.995)PK 120.66 5.84E-17 6254000 28321 30864 28694 34296 35424 28291 40236 30838 31722 35278 TRUE FALSE 30489.27754 29331.33864 29650.64364 31493.90709 34033.07577 29367.63383 34952.96487 34868.63248 34481.12222 34126.88175 0.893409417 0.859479013 0.86883542 0.922847488 0.997251258 0.86054255 1.024206229 1.021735087 1.010380101 1 15.05862098 -6.674357951 0.630576555 1.021552018 0.865148801 0.607902982 0.042277058 0.553908713 0.485401727 0.033305806 0.039772024 2.12E-07 6.674357951 -0.156403217 LMT(ph)PTLSFLAR ddPTM_A459_MK2206_30min_R1 2 LMTPTLSFLAR 11 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 LMT(0.896)PT(0.094)LS(0.011)FLAR;LMT(1)PTLSFLAR 145.14 0.0016537 4118100 1917.04 1887.58 1469.07 1611.85 2005.87 1179.38 2031.58 1674.64 1628.57 1359.54 TRUE FALSE 1753.985681 1764.698199 1369.353621 1735.994966 1925.97195 1246.155476 1896.057005 1659.998799 1797.865679 1527.970079 1.147918866 1.154929814 0.896191385 1.136144608 1.260477529 0.815562748 1.240899302 1.086407922 1.176636705 1 10.57740058 LMTGVIS(ph)PERR ddPTM_A459_MK2206_30min_R1 1 LMTGVISPERR 11 1 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 LMTGVIS(1)PERR 69.314 0.035662 3545200 2943.5 2859 2485.2 1890.4 2515.9 2326.6 2931.5 2354.1 2172.1 2137.1 TRUE FALSE 2693.139868 2672.87858 2316.511548 2035.998936 2415.686375 2458.330081 2735.944984 2333.518352 2397.897568 2401.860082 1.121272587 1.112836922 0.964465651 0.847675912 1.005756494 1.023510945 1.13909424 0.971546332 0.998350231 1 11.2299364 -5.250651223 22.88217102 0.994242263 1.11705484 0.351000158 0.06703759 279.0775081 591924.3477 0.018865573 0.048615038 5.61E-06 5.250651223 0.122812577 LMTGVIS(ph)PERR ddPTM_A459_MK2206_30min_R2 1 LMTGVISPERR 11 1 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 LMTGVIS(1)PERR 82.515 0.020453 4315200 12506 13511 10718 13950 11380 9334.5 10198 7965.7 11139 11518 TRUE FALSE 13463.46898 12840.06339 11075.33277 12810.24038 10933.16402 9689.730938 8858.99035 9006.84434 12107.85009 11142.1686 1.208334702 1.152384589 0.994001542 1.149708 0.981242019 0.869644975 0.795086726 0.808356493 1.086669078 1 13.44374243 -6.45717338 3.268100471 0.893518815 1.118532357 0.519353574 0.096174385 0.202190921 4.237713625 0.032659331 0.036213487 3.49E-07 6.45717338 0.225013542 LMWGDS(ph)GLY(ph)Y(ph)CIITTPDDLEGK ddPTM_A459_MK2206_30min_R1 1 LMWGDSGLYYCIITTPDDLEGK 22 0 E9PLS0;E9PPL0;E9PR23;E9PRA4;E9PNU3;E9PQC8;Q71H61 E9PLS0 ILDR2 Immunoglobulin-like domain-containing receptor 2 3 LMWGDS(0.993)GLY(0.793)Y(0.793)CIIT(0.218)T(0.203)PDDLEGK 41.084 0.046973 0 586.09 711.31 558.24 450.74 579.38 489.49 544.53 429.71 542.45 627.94 TRUE FALSE 536.2399678 665.0035897 520.3482241 485.4560729 556.3020677 517.2045008 508.2053973 425.9530908 598.8396187 705.7339479 0.759833035 0.942286526 0.737314998 0.687874056 0.78826032 0.732860453 0.720109042 0.603560438 0.848534523 1 9.462980599 -1.580331994 24.81290354 0.768726833 0.016252172 0 0.113531524 0 0 0.025190833 0 0.026282581 1.580331994 -0.752474661 LNAS(ph)PAAR ddPTM_A459_MK2206_30min_R1 2 LNASPAAR 8 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 LNAS(1)PAAR;LNAS(1)PAAR 110.54 0.011981 90176000 10649.1 9339.6 8926.3 7369.2 9869 9510 10760.4 8738.7 8790.1 8893.3 TRUE FALSE 9743.338124 8731.590342 8320.407626 7936.777061 9475.896832 10048.44798 10042.59335 8662.298467 9703.862351 9995.069145 0.974814479 0.873589789 0.832451232 0.79406925 0.948057156 1.005340517 1.004754765 0.866657183 0.970864955 1 13.28700083 -6.44174762 8.597928591 0.964854388 0.866711075 0.415014561 0.056861222 0.387671503 38.20058367 0.018610537 0.021079641 3.62E-07 6.44174762 -0.098143313 LNCS(ph)TSPEIFR ddPTM_A459_MK2206_30min_R2 2 LNCSTSPEIFR 11 0 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 LNCS(0.333)T(0.333)S(0.333)PEIFR;LNCS(0.498)T(0.251)S(0.251)PEIFR 109.72 0.0092334 27206000 81959 100800 85987 111837 99017 98258 103656 86986 99271 96201 TRUE FALSE 88233.84406 95794.41858 88853.76366 102699.5594 95129.09506 101997.277 90045.84269 98355.36887 107905.4121 93061.96925 0.948119245 1.029361611 0.954780609 1.103560995 1.022212358 1.0960146 0.967590127 1.056880374 1.159500632 1 16.5059041 -5.752290084 24.99912804 1.056665615 0.982614597 0.305191984 0.055502273 261.3262707 714029.14 0.014764085 0.025125118 1.77E-06 5.752290084 -0.074051019 LNCST(ph)SPEIFR ddPTM_A459_MK2206_30min_R1 4 LNCSTSPEIFR 11 0 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 LNCS(0.128)T(0.436)S(0.436)PEIFR;LNCS(0.176)T(0.605)S(0.219)PEIFR;LNCS(0.027)T(0.794)S(0.179)PEIFR;LNCS(0.131)T(0.435)S(0.435)PEIFR 140.78 0.0024743 110522500 14070.9 15015.7 15761.3 12012.5 15175.2 13904.8 16957.9 13849.4 14403.8 14746.5 TRUE FALSE 12874.09607 14038.1752 14691.46687 12937.70483 14570.73965 14692.07776 15826.66943 13728.31616 15901.12655 16573.40775 0.776792333 0.847030099 0.886448164 0.780630334 0.879163771 0.886485024 0.954943586 0.828333941 0.959436152 1 14.01658265 -1.522878749 0.042909614 1.329303646 0.110361898 0.594378726 0.045345728 479.76762 1.569819595 11.70697865 41.25548354 0.03 1.522878749 -1.218941748 LNCST(ph)SPEIFR ddPTM_A459_MK2206_30min_R2 2 LNCSTSPEIFR 11 0 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 LNCS(0.127)T(0.436)S(0.436)PEIFR;LNCS(0.098)T(0.451)S(0.451)PEIFR 140.45 0.0025372 85659000 144671 162903 154615 168006 170173 159866 168627 154184 125992 148100 TRUE FALSE 155747.123 154813.4739 159769.7869 154279.3724 163491.153 165949.8127 146486.0723 174336.3782 136950.5564 143267.5091 1.087107076 1.080590253 1.115185068 1.076862251 1.141160016 1.158321337 1.022465409 1.216859142 0.955907988 1 17.12835194 -8.288158234 24.99943744 0.977953937 1.10967454 0.526904414 0.050878363 637.9465194 596887.2056 0.045434937 0.011743982 5.15E-09 8.288158234 0.131720603 LNCSTS(ph)PEIFRK ddPTM_A459_MK2206_30min_R1 1 LNCSTSPEIFRK 12 1 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 LNCS(0.004)T(0.006)S(0.99)PEIFRK 184.11 0.00018745 14485000 3306.5 3209.2 2921.1 3269.5 3717.7 2751.6 3200.6 3444 1974.3 1437.4 TRUE FALSE 3025.264812 3000.280497 2722.823871 3521.317457 3569.616137 2907.393214 2987.093814 3413.889471 2179.53555 1615.475964 1.872677081 1.857211474 1.685462323 2.179739925 2.209637417 1.799713075 1.849048751 2.113240647 1.349159999 1 10.65774357 -8.450415562 3.742743606 1.005823417 1.941133453 0.787466255 0.164728054 0.094254531 2.534196868 0.167480848 0.044136178 3.54E-09 8.450415562 0.935310036 LNCSTS(ph)PEIFRK ddPTM_A459_MK2206_30min_R2 1 LNCSTSPEIFRK 12 1 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 LNCS(0.003)T(0.039)S(0.959)PEIFRK 95.57 0.032173 4664900 26639 49452 36152 48075 47644 50585 37645 27196 42812 34035 TRUE FALSE 28678.50232 46996.28559 37357.28964 44147.11872 45773.25717 52510.04762 32702.16628 30750.61058 46535.71037 32924.44074 0.871039923 1.427398144 1.13463703 1.340861613 1.390251623 1.594865287 0.993248953 0.933975183 1.413409289 1 15.00687131 -7.327971763 24.99999379 1.079656189 1.298655265 0.1803305 0.216949107 330.3784902 124140.3099 0.089554787 0.060377831 4.70E-08 7.327971763 0.218999076 LNDGHFMPVLGFGT(ph)YAPPEVPR ddPTM_A459_MK2206_30min_R1 1 LNDGHFMPVLGFGTYAPPEVPR 22 0 A0A0A0MSS8;P42330 A0A0A0MSS8 AKR1C3 Aldo-keto reductase family 1 member C3 1 LNDGHFMPVLGFGT(1)YAPPEVPR 116.28 6.14E-05 0 892.87 1043.5 915.96 901.51 1050.1 1045.4 1321.1 806.6 976.2 676.69 TRUE FALSE 816.9267179 975.5679603 853.7871872 970.9444564 1008.272293 1104.589645 1232.971829 799.5479812 1077.679483 760.5234659 1.074163723 1.282758526 1.122630958 1.276679156 1.325760925 1.452407051 1.621214709 1.051312704 1.417023316 1 9.570848953 -5.958022839 3.879493645 1.334750067 1.172528727 0.115894599 0.178841967 0.445292138 14.32458861 0.051465775 0.076910896 1.10E-06 5.958022839 -0.16222134 LNDGHFMPVLGFGTYAPAEVPK ddPTM_A459_MK2206_30min_R1 2 LNDGHFMPVLGFGTYAPAEVPK 22 0 P52895;B4DK69;S4R3P0;P52895-2;Q04828 P52895;Q04828 AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 146.06 6.30E-07 65112000 11054 12660.1 12763.5 12421.6 11473.6 10929.1 11371.8 12066.3 9181 10616.1 FALSE TRUE 10113.79925 11835.92519 11897.14918 13378.31378 11016.58222 11547.8962 10613.20797 11960.80561 10135.3978 11931.30262 0.847669327 0.992006118 0.997137493 1.121278557 0.923334406 0.967865502 0.889526342 1.002472739 0.849479569 1 13.54246394 LNDGHFMPVLGFGTYAPPEVPR ddPTM_A459_MK2206_30min_R1 1 LNDGHFMPVLGFGTYAPPEVPR 22 0 A0A0A0MSS8;P42330 A0A0A0MSS8 AKR1C3 Aldo-keto reductase family 1 member C3 0 151.84 2.36E-07 22769000 4903.4 4984.4 4848.2 4283.5 5145.9 3950.1 4774.3 4999 4142.8 3804.7 FALSE TRUE 4486.340081 4659.914654 4519.117692 4613.415912 4940.927906 4173.751248 4455.815158 4955.29427 4573.458885 4276.05496 1.049177366 1.089769588 1.056842752 1.078895373 1.155487465 0.976075211 1.042038795 1.158847189 1.069551006 1 12.06206468 -8.569095521 21.60240667 0.999999999 1.076528387 0.166632271 0.050604178 10301.98625 4815294.675 0.049320618 0.012734529 2.70E-09 8.569095521 0.076528388 LNDGHFMPVLGFGTYAPPEVPR ddPTM_A459_MK2206_30min_R2 1 LNDGHFMPVLGFGTYAPPEVPR 22 0 A0A0A0MSS8;P42330 A0A0A0MSS8 AKR1C3 Aldo-keto reductase family 1 member C3 0 160.25 5.00E-09 3129200 17340 21363 21003 26211 20558 22406 21038 18391 22800 22664 FALSE TRUE 18667.56373 20302.14448 21703.22954 24069.47746 19750.78962 23258.67603 18275.68533 20794.76685 24783.10279 21924.47554 0.851448588 0.926003655 0.989908721 1.097835951 0.90085574 1.060854386 0.833574573 0.948472715 1.130385206 1 14.42025471 -4.954193828 2.613294606 0.989903389 0.846275097 0.225609513 0.084088043 0.548498684 6.373346217 0.022009861 0.14780673 1.11E-05 4.954193828 -0.143628292 LNDS(ph)PTLK ddPTM_A459_MK2206_30min_R2 4 LNDSPTLK 8 0 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 LNDS(0.996)PT(0.004)LK;LNDS(0.991)PT(0.009)LK;LNDS(0.561)PT(0.439)LK;LNDS(0.988)PT(0.012)LK 114.76 0.010174 178098000 758155 891474 788408 812369 840611 596830 928591 747663 679423 814700 TRUE FALSE 816199.9297 847204.6975 814693.1292 745995.8541 807604.3884 619542.7839 806665.8863 845385.1212 738517.9844 788116.4057 1.035633726 1.074974066 1.033721825 0.946555418 1.02472729 0.786105681 1.023536473 1.072665301 0.937067138 1 19.58804921 -5.629858669 4.990567998 0.970159931 1.055089564 0.195556331 0.073205848 0.344119633 13.65044722 0.020638538 0.036588466 2.34E-06 5.629858669 0.084929634 LNDSPT(ph)LK ddPTM_A459_MK2206_30min_R1 1 LNDSPTLK 8 0 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 LNDS(0.121)PT(0.879)LK 166.69 0.00057865 34436000 8675.7 8885.9 8034.5 7945.7 6900.7 5854.4 7122.4 8054.4 7357.2 6674.4 TRUE FALSE 7937.786157 8307.426295 7489.140525 8557.679191 6625.830507 6185.871069 6647.277692 7983.98123 8122.007268 7501.275061 1.058191586 1.107468561 0.998382337 1.140829942 0.8832939 0.824642613 0.886153039 1.064349883 1.082750226 1 12.87292013 -6.261806031 24.99999651 0.949935726 1.072890583 0.329084647 0.083080318 44.30395251 3020809.353 0.028009065 0.033733719 5.47E-07 6.261806031 0.122954857 LNEAQPSTIATSMRDSLIDS(ph)LT ddPTM_A459_MK2206_30min_R1 1 LNEAQPSTIATSMRDSLIDSLT 22 1 P56537;P56537-2 P56537 EIF6 Eukaryotic translation initiation factor 6 1 LNEAQPSTIAT(0.002)S(0.006)MRDS(0.204)LIDS(0.652)LT(0.136) 68.927 0.00272 2991300 871.45 763.86 703.93 618.94 887.4 838.56 733.01 943.76 657.18 592.84 TRUE FALSE 797.3286013 714.1325752 656.1491929 666.610866 852.0529789 886.0385425 684.1122404 935.5088058 725.4962127 666.2854949 1.196677111 1.071811679 0.984786849 1.000488336 1.278810638 1.329818147 1.026755416 1.404065994 1.088866887 1 9.379996676 -6.258251335 24.9581353 1.20727954 1.058420746 0.165278162 0.132855149 412.5608851 3229800.071 0.038422962 0.047548454 5.52E-07 6.258251335 -0.148858795 LNECIS(ph)PVANEMNHLPAHSHDLQR ddPTM_A459_MK2206_30min_R1 2 LNECISPVANEMNHLPAHSHDLQR 24 0 P23497-5;P23497-2;P23497-3;P23497;P23497-4 P23497-5 SP100 Nuclear autoantigen Sp-100 1 LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR 143.5 6.09E-09 14892300 3679.8 3431.6 3990.9 2686 3978.6 4187.3 4347.6 3999.4 3735.2 3434.1 TRUE FALSE 3366.813687 3208.202216 3720.008827 2892.876185 3820.123937 4424.381307 4057.579537 3964.433667 4123.487407 3859.542234 0.872334977 0.831239049 0.963847162 0.749538678 0.989786795 1.146348722 1.051311086 1.027177169 1.068387689 1 11.91421403 -6.491203426 8.27213856 1.060888414 0.861244797 0.719208253 0.060274655 0.1489124 35.58748869 0.018040032 0.020038881 3.23E-07 6.491203426 -0.199643617 LNECIS(ph)PVANEMNHLPAHSHDLQR ddPTM_A459_MK2206_30min_R2 4 LNECISPVANEMNHLPAHSHDLQR 24 0 P23497-5;P23497-2;P23497-3;P23497;P23497-4 P23497-5 SP100 Nuclear autoantigen Sp-100 1 LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR 80.41 9.79E-05 69109900 84225 109000 113350 132346 116716 100969 110295 100454 101387 126084 TRUE FALSE 90673.33076 103587.2185 117129.0324 121532.9084 112133.1434 104811.446 95813.13401 113583.6827 110205.458 121969.8894 0.743407502 0.849285172 0.960311049 0.996417305 0.919351029 0.859322301 0.785547437 0.931243631 0.903546429 1 16.89616551 -12.29558498 0.013678043 1.954871552 5.40E-06 0.202438682 0.07248583 10467.48203 16.33795729 1336.942829 1016.466117 5.06E-13 12.29558498 -1.954866152 LNEQAS(ph)EEILK ddPTM_A459_MK2206_30min_R1 2 LNEQASEEILK 11 0 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;Q01105 Q01105-2;Q01105 SET Protein SET 1 LNEQAS(1)EEILK;LNEQAS(1)EEILK 149.35 0.00063284 14087300 3643.9 3665.1 3662.9 2413.3 2431.6 2670.2 3953.7 2852.5 4717.7 5479.7 TRUE FALSE 3333.96717 3426.501324 3414.272553 2599.172784 2334.744223 2821.384416 3689.955887 2827.560893 5208.121797 6158.566606 0.541354407 0.556379681 0.554394029 0.42204184 0.379105135 0.458123553 0.599158233 0.459126461 0.8456711 1 12.58837889 -8.396472225 3.217939002 0.996512777 0.494995359 0.87213936 0.066398078 0.082166282 1.546723596 0.069437858 0.018614038 4.01E-09 8.396472225 -0.501517418 LNEQAS(ph)EEILK ddPTM_A459_MK2206_30min_R2 2 LNEQASEEILK 11 0 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;Q01105 Q01105-2;Q01105 SET Protein SET 1 LNEQAS(1)EEILK;LNEQAS(1)EEILK 125.28 0.0033801 7519100 54731 41703 47652 47470 41502 39849 46028 40347 25060 52582 TRUE FALSE 58921.24744 39632.08966 49240.6939 43591.54915 39872.42295 41365.48162 39984.46831 45620.49143 27239.6735 50866.25365 1.158356341 0.779143083 0.968042472 0.856983678 0.783867891 0.813220527 0.786070635 0.896871465 0.535515623 1 15.63442122 -2.900390232 1.7083558 0.820025246 200 0.385957447 0.123125875 844.6765013 5.335859103 0.031568937 656857.5669 0.001257795 2.900390232 199.1799748 LNEQAS(ph)EEILKVEQK ddPTM_A459_MK2206_30min_R1 1 LNEQASEEILKVEQK 15 1 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;Q01105 Q01105-2;Q01105 SET Protein SET 1 LNEQAS(1)EEILKVEQK 62.861 0.040935 5635400 2102.5 2271.6 2241.2 2333.3 2077.4 1839.9 2323.2 1944 2325.1 1526.7 TRUE FALSE 1923.671334 2123.718427 2089.073588 2513.01117 1994.652759 1944.073548 2168.223567 1927.003813 2566.802465 1715.839122 1.121125699 1.237714189 1.217522996 1.464596032 1.162494044 1.133016215 1.263652017 1.123067885 1.49594588 1 10.74469858 LNES(ph)DEQHQENEGTNQLVMGIQK ddPTM_A459_MK2206_30min_R2 1 LNESDEQHQENEGTNQLVMGIQK 23 0 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 LNES(1)DEQHQENEGTNQLVMGIQK 122.22 2.17E-05 0 9890 10390 8415.2 12058 10836 10105 13108 9567.7 6773 12040 TRUE FALSE 10647.186 9874.047708 8695.758568 11072.82283 10410.52419 10489.55286 11386.90385 10818.23124 7362.103297 11647.13579 0.914146293 0.847766171 0.7466006 0.950690627 0.893826979 0.900612223 0.977657002 0.928831898 0.632095601 1 13.5076876 -4.229959797 5.617172895 0.876191407 2.594917516 0.011853614 0.10584969 5039.77758 2441.491575 0.026005789 106790.8056 5.89E-05 4.229959797 1.718726109 LNFDMTAS(ph)PK ddPTM_A459_MK2206_30min_R1 2 LNFDMTASPK 10 0 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;A0A087WYS3;Q9ULU4-8;Q9ULU4-17;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 LNFDMT(0.034)AS(0.966)PK;LNFDMTAS(1)PK 131.79 0.0025493 73579000 13665.6 16457.6 17395.3 14589.1 9247 8539.3 10597.9 10540.3 15123.9 15155.7 TRUE FALSE 12503.26896 15386.20725 16214.5555 15712.75501 8878.672409 9022.787786 9890.933428 10448.14727 16696.08353 17033.30254 0.734048429 0.903301472 0.951932573 0.922472608 0.521253726 0.529714526 0.580682073 0.613395274 0.980202371 1 14.05607056 -6.240999294 24.3435443 0.66997678 0.885035688 0.185066742 0.16944906 812.2868325 967409.1252 0.05013864 0.064640483 5.74E-07 6.240999294 0.215058908 LNFDMTAS(ph)PK ddPTM_A459_MK2206_30min_R2 2 LNFDMTASPK 10 0 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;A0A087WYS3;Q9ULU4-8;Q9ULU4-17;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 LNFDMT(0.002)AS(0.998)PK;LNFDMT(0.01)AS(0.99)PK 109.95 0.0097542 33650000 131049 94174 102538 92258 98620 67200 113979 84951 76144 104166 TRUE FALSE 141082.2122 89497.4561 105956.5657 84720.22628 94747.68327 69757.34309 99013.42039 96054.38738 82766.86748 100767.072 1.400082482 0.888161722 1.051499897 0.840753082 0.940264329 0.692263273 0.982596978 0.953231899 0.82136819 1 16.62066476 LNFSHGTHEYHAETIK ddPTM_A459_MK2206_30min_R1 2 LNFSHGTHEYHAETIK 16 0 P14618;H3BQ34;H3BUW1;H3BTJ2;H3BT25;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 97.073 0.0027474 24365200 5497.6 3471.9 4488.3 3779.2 6883.1 5350.2 5872.1 4554.1 3416.9 3063.3 FALSE TRUE 5030.000251 3245.878679 4183.646701 4070.274639 6608.931552 5653.1237 5480.382923 4514.283984 3772.098982 3442.804731 1.461018165 0.942800691 1.215185591 1.182255445 1.919635898 1.642011134 1.591836701 1.311222778 1.095647089 1 11.74936864 -3.445311832 15.4468353 1.358049687 10.511102 0 0.297365937 0 0 0.07258027 0 0.000358664 3.445311832 9.153052318 LNFSHGTHEYHAETIK ddPTM_A459_MK2206_30min_R2 2 LNFSHGTHEYHAETIK 16 0 P14618;H3BQ34;H3BUW1;H3BTJ2;H3BT25;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 104.94 0.0013195 13110100 40182 69293 50893 71187 65753 77047 63426 51680 64127 51017 FALSE TRUE 43258.36481 65852.01038 52589.74722 65370.79438 63171.20684 79979.07757 55098.09001 58434.75344 69704.65054 49352.31947 0.876521413 1.334324528 1.06559829 1.324573902 1.280004821 1.620573834 1.116423516 1.184032566 1.412388542 1 15.59083027 -4.755586081 24.97401875 1.268905225 0.87652077 0.3076065 0.172005224 230.6375036 983951.1411 0.041686878 0.365052277 1.76E-05 4.755586081 -0.392384454 LNGPGENVS(ph)EDEAQSSNQR ddPTM_A459_MK2206_30min_R1 1 LNGPGENVSEDEAQSSNQR 19 0 A0A3B3ISF0;Q659C4-2;Q659C4;H0Y9K3;D6R9W6;D6RJB0;Q659C4-9;A0A3B3IT29;A0A3B3ISF8;G3V0E9;Q659C4-3 A0A3B3ISF0 LARP1B La-related protein 1B 1 LNGPGENVS(1)EDEAQSSNQR 230.27 1.17E-23 7884200 1478.2 1450.2 1612.4 1559 1610.7 1661.7 1874 1468.1 1193.3 1311.6 TRUE FALSE 1352.471328 1355.791716 1502.95478 1679.07445 1546.542408 1755.784018 1748.988879 1455.264556 1317.347805 1474.09091 0.917495195 0.919747695 1.019580794 1.139057597 1.049149953 1.191096157 1.186486442 0.987228499 0.893667952 1 10.52560979 -5.384014219 3.450268049 1.073466928 0.917355671 0.292568221 0.08778668 0.30219052 6.535306314 0.025604543 0.060094708 4.13E-06 5.384014219 -0.156111256 LNGPGENVS(ph)EDEAQSSNQR ddPTM_A459_MK2206_30min_R2 3 LNGPGENVSEDEAQSSNQR 19 0 A0A3B3ISF0;Q659C4-2;Q659C4;H0Y9K3;D6R9W6;D6RJB0;Q659C4-9;A0A3B3IT29;A0A3B3ISF8;G3V0E9;Q659C4-3 A0A3B3ISF0 LARP1B La-related protein 1B 1 LNGPGENVS(1)EDEAQSSNQR;LNGPGENVS(1)EDEAQSSNQR;LNGPGENVS(1)EDEAQSSNQR 316.54 8.57E-118 62206000 73562 89740 68429 90607 83565 85780 86795 67670 75375 80381 TRUE FALSE 79193.96328 85283.64209 70710.38871 83204.11826 80283.81822 89044.41801 75398.71224 76514.70135 81930.98125 77758.17455 1.018464795 1.096780404 0.909362766 1.070036928 1.032480748 1.145145427 0.969656408 0.984008457 1.053663897 1 16.24670673 LNGPGENVSEDEAQS(ph)SNQR ddPTM_A459_MK2206_30min_R2 1 LNGPGENVSEDEAQSSNQR 19 0 A0A3B3ISF0;Q659C4-2;Q659C4;H0Y9K3;D6R9W6;D6RJB0;Q659C4-9;A0A3B3IT29;A0A3B3ISF8;G3V0E9;Q659C4-3 A0A3B3ISF0 LARP1B La-related protein 1B 1 LNGPGENVS(0.012)EDEAQS(0.986)S(0.003)NQR 279.5 1.39E-71 14829000 42361 47310 47231 52668 46972 51757 59807 40043 40920 53600 TRUE FALSE 45604.19073 44960.6542 48805.65797 48364.85592 45127.64326 53726.6489 51954.26906 45276.75759 44479.14763 51851.03639 0.879523225 0.867111968 0.941266778 0.932765462 0.870332522 1.036173096 1.001990947 0.873208343 0.857825624 1 15.66208521 -5.262877941 24.61197552 0.93768424 0.873317591 0.173881585 0.057361576 182.0520334 3114770.635 0.015750583 0.035933624 5.46E-06 5.262877941 -0.064366649 LNHS(ph)PPQSSSR ddPTM_A459_MK2206_30min_R1 2 LNHSPPQSSSR 11 0 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6 A0A087X0H9 RBM26 RNA-binding protein 26 1 LNHS(1)PPQSSSR;LNHS(0.953)PPQS(0.036)S(0.01)S(0.001)R 127.78 0.0029026 55695000 2005.35 1778.3 1717.81 1542.54 1992.98 2094.6 2628.44 1842.5 2039.46 2240.58 TRUE FALSE 1834.784452 1662.532347 1601.209843 1661.346698 1913.595386 2213.194442 2453.101563 1826.391217 2251.469165 2518.159966 0.728621087 0.66021713 0.635865022 0.659746291 0.75991812 0.878893506 0.974164309 0.725288005 0.894092987 1 11.29815422 -6.572538853 2.817966617 0.882893055 0.668758887 0.680587223 0.072189396 0.167192961 2.701007787 0.025402598 0.026277297 2.68E-07 6.572538853 -0.214134168 LNHVAAGLVS(ph)PSLK ddPTM_A459_MK2206_30min_R1 2 LNHVAAGLVSPSLK 14 0 Q5T757;Q05519-2;Q05519;Q5T760 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 LNHVAAGLVS(0.998)PS(0.002)LK;LNHVAAGLVS(0.994)PS(0.006)LK 133.93 0.00045382 326110000 21584.1 22376 20795.6 17926.2 18193.5 16759.3 18883.3 17633.1 17367.4 16613.6 TRUE FALSE 19748.25895 20919.31833 19384.05261 19306.87903 17468.81437 17708.19708 17623.62951 17478.93567 19172.80338 18671.81819 1.057650559 1.120368574 1.038144888 1.03401173 0.935571147 0.948391683 0.943862527 0.93611321 1.026831087 1 14.1885748 -5.905059778 1.945914623 0.960416603 1.084140405 0.670270732 0.033982846 0.177516899 1.366691561 0.010483995 0.018242502 1.24E-06 5.905059778 0.123723801 LNHVAAGLVS(ph)PSLK ddPTM_A459_MK2206_30min_R2 2 LNHVAAGLVSPSLK 14 0 Q5T757;Q05519-2;Q05519;Q5T760 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 LNHVAAGLVS(0.997)PS(0.003)LK;LNHVAAGLVS(0.69)PS(0.31)LK 86.573 0.015319 286000000 365730 384080 355100 407000 356330 295160 414000 293830 260640 345570 TRUE FALSE 393730.57 365007.1457 366938.8568 373746.7981 342338.6938 306392.5206 359641.3027 332234.5899 283309.9961 334294.0792 1.177797019 1.091874396 1.097652874 1.118018001 1.024064484 0.916535888 1.07582313 0.993839289 0.847487328 1 18.35075828 -6.223914051 0.707856984 0.955868977 1.153662872 0.581363611 0.060812538 0.625393886 0.665391967 0.037864065 0.072171977 5.97E-07 6.223914051 0.197793895 LNLDY(ph)LLEMLWEYLALTCIY(ph)T(ph)K ddPTM_A459_MK2206_30min_R1 1 LNLDYLLEMLWEYLALTCIYTK 22 0 A8MZF9;P55039 A8MZF9 DRG2 Developmentally-regulated GTP-binding protein 2 3 LNLDY(0.998)LLEMLWEY(0.005)LALT(0.015)CIY(0.988)T(0.994)K 44.029 0.034765 13540000 1682.8 1882.5 1965.9 1786.5 1623.8 1459.1 1651.8 1956.3 1420.2 1318.3 TRUE FALSE 1539.669023 1759.948908 1832.460185 1924.09654 1559.120608 1541.712981 1541.611436 1939.196275 1567.834872 1481.620957 1.039178756 1.187853681 1.236794186 1.298642902 1.05230734 1.040558298 1.040489762 1.308834265 1.058188915 1 10.53296069 -6.287441422 24.88112218 1.094550903 1.19371835 0.210426937 0.100291244 1296.819485 1240911.594 0.032412107 0.036764956 5.16E-07 6.287441422 0.099167447 LNLGTDSDS(ph)SPQK ddPTM_A459_MK2206_30min_R1 1 LNLGTDSDSSPQK 13 0 Q16512;Q16512-2;K7EN76;Q16512-3 Q16512 PKN1 Serine/threonine-protein kinase N1 1 LNLGTDS(0.003)DS(0.498)S(0.498)PQK 238.88 1.04E-17 35512000 4813 5306.2 5115.2 4521.4 4386.7 4114.5 4549.6 4600.3 4920.3 4743.7 TRUE FALSE 4403.629076 4960.765416 4767.994476 4869.639011 4211.96845 4347.459434 4246.104485 4560.080062 5431.782792 5331.385369 0.825982136 0.930483368 0.894325611 0.913390925 0.790032638 0.81544648 0.796435484 0.855327414 1.018831395 1 12.38029475 -8.25884357 24.21119325 1.009415722 0.85347955 0.653373046 0.04566207 93.44657482 871613.3777 0.038108635 0.012890097 5.51E-09 8.25884357 -0.155936172 LNLGTDSDSS(ph)PQK ddPTM_A459_MK2206_30min_R1 2 LNLGTDSDSSPQK 13 0 Q16512;Q16512-2;K7EN76;Q16512-3 Q16512 PKN1 Serine/threonine-protein kinase N1 1 LNLGTDS(0.003)DS(0.067)S(0.93)PQK;LNLGTDS(0.001)DS(0.082)S(0.918)PQK 206.45 1.23E-05 62993000 26365.8 23502.3 22870.8 20519.1 27570.6 24431.3 26159.4 24199.5 20280.1 19354.8 TRUE FALSE 24123.25026 21972.296 21318.39382 22099.48464 26472.40462 25814.57909 24414.35416 23987.92632 22388.28897 21752.61875 1.108981431 1.010098888 0.980038039 1.015945937 1.216975525 1.186734314 1.122363907 1.10276039 1.029222699 1 14.40890147 -4.426108421 21.13061862 1.080479924 4.269292469 0.011634752 0.077770657 2776.278924 601046.3004 0.020892214 3647.29979 3.75E-05 4.426108421 3.188812545 LNLGTDSDSS(ph)PQK ddPTM_A459_MK2206_30min_R2 4 LNLGTDSDSSPQK 13 0 Q16512;Q16512-2;K7EN76;Q16512-3 Q16512 PKN1 Serine/threonine-protein kinase N1 1 LNLGTDSDS(0.075)S(0.925)PQK;LNLGTDS(0.008)DS(0.085)S(0.907)PQK;LNLGTDSDS(0.007)S(0.993)PQK;LNLGTDS(0.001)DS(0.026)S(0.972)PQK 254.94 1.61E-23 171349000 716020 737200 703290 702330 744750 597280 849410 596960 598070 776750 TRUE FALSE 770839.0417 700591.72 726737.3376 644947.3924 715507.3729 620009.9089 737881.4467 674984.7217 650089.0475 751404.7111 1.025863999 0.932376001 0.967171654 0.858322263 0.95222636 0.825134445 0.982002689 0.898297165 0.865164988 1 19.51923064 -3.153307171 0.961365185 0.91055608 3.387808166 0.255573836 0.054578172 49.85243837 2.667581702 0.016440593 242.2505176 0.000702575 3.153307171 2.477252086 LNLTLS(ph)PAK ddPTM_A459_MK2206_30min_R2 2 LNLTLSPAK 9 0 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 LNLT(0.001)LS(0.999)PAK;LNLT(0.416)LS(0.584)PAK 101.56 0.016919 17567700 128990 138755 127539 125609 132621 98334 167345 110952 106502 134807 TRUE FALSE 138865.5736 131864.6285 131791.0866 115346.3429 127413.6332 102076.1693 145372.4005 125453.8074 115765.3514 130408.2586 1.064852602 1.011167773 1.010603837 0.884501826 0.977036535 0.782743136 1.114748422 0.962008148 0.887714878 1 16.99267571 -5.584620412 7.95957542 0.944285775 1.031381254 0.185702757 0.082433543 0.413131682 46.57916128 0.022136142 0.038518067 2.60E-06 5.584620412 0.087095479 LNLTS(ph)PK ddPTM_A459_MK2206_30min_R1 1 LNLTSPK 7 0 A0A0A0MQZ8;Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;H0Y7Y3 A0A0A0MQZ8;Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 LNLT(0.077)S(0.923)PK 89.029 0.031501 166870000 15094 19576 19794 16960 12163 10382 13575 13007 15052 15263 TRUE FALSE 13810.17604 18301.59884 18450.43843 18266.26214 11678.52195 10969.81987 12669.43652 12893.28117 16616.70926 17153.89567 0.805075203 1.06690627 1.075582992 1.064846289 0.680808732 0.63949438 0.738574885 0.751624087 0.968684291 1 14.06624863 -6.255493812 24.97413069 0.773362623 1.012837259 0.367022398 0.130543192 469.4525095 1971916.538 0.03929705 0.049397308 5.55E-07 6.255493812 0.239474636 LNLTS(ph)PK ddPTM_A459_MK2206_30min_R2 2 LNLTSPK 7 0 A0A0A0MQZ8;Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;H0Y7Y3 A0A0A0MQZ8;Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 LNLT(0.082)S(0.918)PK;LNLT(0.028)S(0.972)PK 85.355 0.036327 368700000 985580 903870 953870 781800 824700 557180 993480 741930 661760 929360 TRUE FALSE 1061036.763 858985.1302 985671.5497 717924.4391 792318.1342 578383.8753 863034.8826 838902.7984 719318.6886 899035.0593 1.18019509 0.955452317 1.096366087 0.798549992 0.881298372 0.64333851 0.959956871 0.933114665 0.80010082 1 19.77801785 -5.757659044 24.99989055 0.852782748 1.065149321 0.459700759 0.107820463 87.34852116 577637.7047 0.029050272 0.047971209 1.75E-06 5.757659044 0.212366573 LNNDDNVDGLLVQLPLPEHIDER ddPTM_A459_MK2206_30min_R1 2 LNNDDNVDGLLVQLPLPEHIDER 23 0 P13995-2;P13995 P13995-2 MTHFD2 "Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase" 0 ; 187.18 5.91E-22 5323500 765.88 840 796.37 786.25 886.79 735.81 832.41 830.46 748.68 796.08 FALSE TRUE 700.7378842 785.3158473 742.3146232 846.8071112 851.4672765 777.4709263 776.8814477 823.1993758 826.5079652 894.7044005 0.783206033 0.877737772 0.829675838 0.946465794 0.951674403 0.868969601 0.868310749 0.920079722 0.923777691 1 9.805267302 -1.522878745 0.105348243 1.024267715 0.444766515 0.536754667 0.041264004 110.1118608 0.818701519 0.477606529 9.244259509 0.03 1.522878745 -0.5795012 LNNDDNVDGLLVQLPLPEHIDER ddPTM_A459_MK2206_30min_R2 1 LNNDDNVDGLLVQLPLPEHIDER 23 0 P13995-2;P13995 P13995-2 MTHFD2 "Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase" 0 102.16 5.17E-05 1225300 3400 3700.8 3567.3 3584.2 2349.8 3498.7 2739.6 938.64 2905.1 1263.8 FALSE TRUE 3660.306614 3517.023653 3686.232002 3291.359395 2257.535045 3631.84548 2379.887229 1061.323471 3157.780347 1222.56231 2.993963241 2.876764338 3.015169021 2.692181306 1.846560317 2.970683336 1.946638802 0.868114012 2.58291976 1 10.25569228 -7.036136675 0.284420827 0.951339416 3.467861745 0.54513934 0.525706108 1.76223416 0.353228046 0.839276806 1.571788982 9.20E-08 7.036136675 2.516522329 LNNS(ph)SPNSSGGVK ddPTM_A459_MK2206_30min_R2 1 LNNSSPNSSGGVK 13 0 O00472;H0Y8G1;O00472-2 O00472 ELL2 RNA polymerase II elongation factor ELL2 1 LNNS(0.495)S(0.495)PNS(0.01)S(0.001)GGVK 161.49 0.00036364 7647300 37400 31591 30982 32003 32718 23423 36560 34330 23563 34983 TRUE FALSE 40263.37276 30022.23688 32014.92442 29388.25253 31433.32693 24314.37868 31759.62808 38817.04887 25612.46715 33841.50757 1.189762976 0.887142419 0.946025361 0.868408491 0.928839439 0.718478 0.938481479 1.147024812 0.756835879 1 15.04650622 -4.758576966 24.8842216 0.910030151 1.189763377 0.352723979 0.113638418 84.92136638 738114.5264 0.027843045 0.188647776 1.74E-05 4.758576966 0.279733226 LNNSS(ph)PNSSGGVK ddPTM_A459_MK2206_30min_R2 1 LNNSSPNSSGGVK 13 0 O00472;H0Y8G1;O00472-2 O00472 ELL2 RNA polymerase II elongation factor ELL2 1 LNNS(0.439)S(0.56)PNS(0.001)SGGVK 156.2 0.00036531 5620300 55909 43892 41335 42108 39910 31583 43726 38018 31569 46024 TRUE FALSE 60189.43603 41712.3871 42713.08827 38667.6417 38342.93287 32784.9132 37984.72368 42987.08314 34314.81456 44522.24065 1.351895932 0.936888766 0.959365199 0.8685017 0.861208518 0.736371591 0.853162894 0.965519311 0.770734223 1 15.44223858 -2.209504459 1.127473855 0.861126037 199.9996439 0.76215978 0.078990814 287.5265143 1.208884897 0.023399783 147067.3541 0.00617299 2.209504459 199.1385179 LNQPGT(ph)PTR ddPTM_A459_MK2206_30min_R1 5 LNQPGTPTR 9 0 P36507;G5E9C7;M0R1B6 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 LNQPGT(0.972)PT(0.028)R;LNQPGT(0.965)PT(0.035)R;LNQPGT(0.999)PT(0.001)R;LNQPGT(0.77)PT(0.23)R;LNQPGT(0.969)PT(0.031)R 166.29 0.0019225 2288741000 23990.1 23626.8 23507.4 19964.4 23628.5 19757.6 23882.3 20521.4 18028 16623.3 TRUE FALSE 21949.61602 22088.69103 21911.78318 21502.06155 22687.32681 20876.25824 22289.15534 20341.98356 19902.07511 18682.7199 1.174861912 1.182305957 1.172836894 1.150906381 1.214348175 1.11741001 1.193035889 1.088812746 1.065266472 1 14.18941688 -8.207973571 1.1796129 1.002293885 1.174111446 0.819627839 0.027093428 0.164855317 0.446635174 0.023305185 0.007680097 6.19E-09 8.207973571 0.171817561 LNQPGT(ph)PTR ddPTM_A459_MK2206_30min_R2 4 LNQPGTPTR 9 0 P36507;G5E9C7;M0R1B6 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 LNQPGT(0.905)PT(0.095)R;LNQPGT(0.898)PT(0.102)R;LNQPGT(0.879)PT(0.121)R;LNQPGT(0.5)PT(0.5)R 122.55 0.013821 917870000 376915 467122 443903 480039 421247 478671 408551 353282 410591 395212 TRUE FALSE 405771.9022 443925.4007 458702.5045 440818.2781 404706.7262 496887.1603 354907.7629 399457.1704 446303.463 382316.2648 1.061351398 1.161147044 1.199798561 1.153019944 1.058565286 1.299675703 0.928309349 1.044834361 1.167367188 1 18.54440705 -7.272683238 24.99335385 1.038863936 1.153327488 0.327440139 0.084474582 951.5779418 2115201.463 0.034528994 0.023528546 5.34E-08 7.272683238 0.114463553 LNQS(ph)AENGSSLPSAASSCAEAR ddPTM_A459_MK2206_30min_R2 2 LNQSAENGSSLPSAASSCAEAR 22 0 Q8NB90-3;Q8NB90-2;Q8NB90 Q8NB90-3 SPATA5 Spermatogenesis-associated protein 5 1 LNQS(0.989)AENGS(0.011)SLPSAASSCAEAR;LNQS(0.971)AENGS(0.028)S(0.001)LPSAASSCAEAR 236.38 5.80E-71 4764700 17144.6 18876.1 16316.6 21199.7 18608.7 17924.2 17861.3 15463.6 13801.2 18817.5 TRUE FALSE 18457.20376 17938.74032 16860.5873 19467.6167 17878.02894 18606.31799 15516.08985 17484.74561 15001.60343 18203.48652 1.013937838 0.985456292 0.926228461 1.069444399 0.98212114 1.022129358 0.852369124 0.960516305 0.824106053 1 14.15192718 -7.249836209 24.97662881 0.905957561 0.998236491 0.374098428 0.057348228 749.2065711 1612721.307 0.020720328 0.015914761 5.63E-08 7.249836209 0.092278929 LNQS(ph)SPDNVTDTK ddPTM_A459_MK2206_30min_R1 4 LNQSSPDNVTDTK 13 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 LNQS(0.614)S(0.386)PDNVT(0.001)DTK;LNQS(0.696)S(0.299)PDNVT(0.005)DTK;LNQS(0.753)S(0.247)PDNVTDTK;LNQS(0.5)S(0.5)PDNVTDTK 204.17 4.35E-05 102874400 15016.5 15105.6 15240.8 13696.8 13129.6 13026.6 13939.7 13038.4 13528.7 11061.4 TRUE FALSE 13739.26782 14122.22269 14206.29696 14751.72991 12606.62023 13764.15483 13009.80805 12924.40664 14935.05678 12431.76974 1.10517393 1.135978464 1.14274132 1.186615439 1.014064811 1.107175818 1.046496864 1.039627254 1.201362082 1 13.60174407 -6.255296338 24.99390126 1.070974021 1.142160515 0.296107539 0.056171296 677.5629937 2756765.161 0.016194774 0.020372082 5.56E-07 6.255296338 0.071186494 LNQS(ph)SPDNVTDTK ddPTM_A459_MK2206_30min_R2 1 LNQSSPDNVTDTK 13 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 LNQS(0.952)S(0.048)PDNVTDTK 134.4 0.0012257 69417000 307630 286860 320090 302270 282590 254010 372910 216360 261700 323150 TRUE FALSE 331182.3893 272614.9495 330761.6408 277573.5741 271494.0967 263676.5285 323946.4691 244638.9949 284462.193 312605.642 1.059425503 0.87207303 1.058079562 0.887935267 0.868487514 0.843479749 1.036278383 0.782580229 0.909971398 1 18.25398429 -5.795034438 24.97820654 0.896542602 0.984080808 0.194349251 0.0841264 287.3402188 213638.6119 0.022508183 0.033387136 1.60E-06 5.795034438 0.087538205 LNQSPS(ph)LAPVK ddPTM_A459_MK2206_30min_R2 2 LNQSPSLAPVK 11 0 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 LNQS(0.05)PS(0.95)LAPVK;LNQS(0.442)PS(0.558)LAPVK 105.65 0.011574 10504700 93573 77809 74378 76517 66179 60257 88928 66477 53359 83587 TRUE FALSE 100737.0208 73945.1182 76857.7254 70265.31633 63580.47994 62550.12236 77251.64678 75165.77215 58000.06937 80859.56304 1.245826926 0.914488224 0.95050879 0.868979669 0.786307489 0.773564932 0.955380463 0.929584199 0.717293876 1 16.30313079 -2.142755649 1.140210977 0.86046838 199.9941335 0.624530103 0.086122323 516.7965235 1.745143586 0.025811207 267860.205 0.007198539 2.142755649 199.1336652 LNQSS(ph)PDNVTDTK ddPTM_A459_MK2206_30min_R1 1 LNQSSPDNVTDTK 13 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 LNQS(0.13)S(0.867)PDNVT(0.003)DTK 108.36 0.0063038 8529000 5514.2 5637.6 5676.8 4745.1 5103.3 4524.6 5296.2 5327.4 5243.6 4558.3 TRUE FALSE 5045.188334 5270.591215 5291.474632 5110.568424 4900.024755 4780.778942 4942.900161 5280.823103 5788.690984 5123.016617 0.984808114 1.028806192 1.032882582 0.997570144 0.956472547 0.933196064 0.964841719 1.03080343 1.129937968 1 12.32277786 -7.988271943 6.76583562 1.070230351 0.986925912 0.383201823 0.040976281 0.139370538 30.71611192 0.025174524 0.01132308 1.03E-08 7.988271943 -0.083304439 LNQSS(ph)PDNVTDTK ddPTM_A459_MK2206_30min_R2 3 LNQSSPDNVTDTK 13 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 LNQS(0.003)S(0.997)PDNVTDTK;LNQS(0.012)S(0.988)PDNVTDTK;LNQS(0.038)S(0.958)PDNVT(0.004)DTK 209.22 8.71E-06 125816000 447774 441786 476768 450238 482192 371612 533300 402775 394926 463310 TRUE FALSE 482055.9217 419847.5497 492663.2072 413452.1152 463258.7193 385753.9551 463277.0694 455419.0754 429275.9496 448192.2326 1.075556171 0.936757755 1.099222992 0.922488354 1.033616126 0.860688622 1.033657069 1.016124427 0.957794264 1 18.77375812 -4.739727809 24.57085313 0.985838955 1.075556598 0.152433562 0.064353937 2699.658236 3054990.089 0.015063752 0.709667835 1.82E-05 4.739727809 0.089717643 LNS(ph)IMRQDS(ph)LEPVLRDPCY(ph)L ddPTM_A459_MK2206_30min_R1 1 LNSIMRQDSLEPVLRDPCYL 20 2 D6RDZ7 D6RDZ7 TSC22D3 3 LNS(1)IMRQDS(1)LEPVLRDPCY(1)L 50.178 0.033415 4980900 586.48 622.42 838.23 632.56 911.08 844.95 846.41 725.8 788.56 613.63 TRUE FALSE 536.5967963 581.9003449 781.333283 681.2798808 874.7897544 892.7903388 789.9475333 719.4544071 870.5336339 689.6511171 0.77806993 0.843760462 1.132939922 0.987861636 1.268452603 1.294553604 1.145430659 1.043215025 1.262281192 1 9.429722901 -5.160759531 1.304543351 1.164696364 0.707476882 0.61237133 0.105085064 0.490971325 1.153315074 0.032515694 0.249750934 6.91E-06 5.160759531 -0.457219483 LNS(ph)PLLSNK ddPTM_A459_MK2206_30min_R2 1 LNSPLLSNK 9 0 P48552 P48552 NRIP1 Nuclear receptor-interacting protein 1 1 LNS(0.995)PLLS(0.005)NK 105.13 0.013923 3835100 45637 44217 37801 44246 40024 29028 40794 34454 32829 41129 TRUE FALSE 49131.00381 42021.24808 39061.26647 40630.96026 38452.45666 30132.68088 35437.6988 38957.2561 35684.40708 39786.9641 1.234851789 1.056156182 0.981760417 1.021212882 0.966458676 0.757350594 0.890686173 0.979146235 0.896886905 1 15.2800082 -3.221114956 0.632911871 0.910378604 3.352723194 0.6608925 0.068276326 13.06350836 0.824077947 0.031493871 35.75219034 0.000601015 3.221114956 2.44234459 LNS(ph)PPSSIYK ddPTM_A459_MK2206_30min_R2 1 LNSPPSSIYK 10 0 C9JKH7;Q53EP0-2;Q53EP0 C9JKH7 FNDC3B Fibronectin type III domain-containing protein 3B 1 LNS(0.729)PPS(0.183)S(0.089)IYK 96.866 0.021241 22269000 144310 73978 89200 84281 74898 79946 158370 87859 80241 100540 TRUE FALSE 155358.4846 70304.36009 92173.88348 77394.9727 71957.12819 82988.40105 137575.8288 99342.47297 87220.21714 97259.38803 1.597362349 0.72285423 0.947711942 0.795758376 0.739847635 0.853268797 1.414524927 1.021417829 0.896779415 1 16.56954989 -10.86915635 16.26720859 0.999999675 0.984234121 0 0.274255437 0 0 0.264259492 0.064092341 1.35E-11 10.86915635 -0.015765554 LNS(ph)SENGEDR ddPTM_A459_MK2206_30min_R1 2 LNSSENGEDR 10 0 Q7L4I2;H0YGP9;E1B6W4;Q7L4I2-2 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 LNS(0.914)S(0.086)ENGEDR;LNS(0.978)S(0.022)ENGEDR 132.5 0.0024294 19064900 4794.8 4200.3 3361.6 3595.7 2999.7 2566.2 4027.5 3742.7 1123.88 2843.2 TRUE FALSE 4386.977082 3926.859707 3133.423958 3872.641437 2880.215597 2711.496026 3758.832824 3709.977968 1240.711348 3195.437081 1.372887956 1.228895956 0.980593227 1.211928553 0.901352624 0.84855247 1.176312576 1.161023633 0.388275944 1 11.64179757 -1.522878745 0.34523933 0.891505378 6.40893856 0.327207566 0.215979664 77.31446368 1.092026148 0.185200905 276.3922206 0.03 1.522878745 5.517433181 LNS(ph)SENGEDR ddPTM_A459_MK2206_30min_R2 2 LNSSENGEDR 10 0 Q7L4I2;H0YGP9;E1B6W4;Q7L4I2-2 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 LNS(0.891)S(0.109)ENGEDR;LNS(0.975)S(0.025)ENGEDR 138.31 0.0016512 93522000 62373.2 66359 68528 59121 60679 47312 52138 58672.2 42320 54273 TRUE FALSE 67148.54015 63063.70856 70812.68932 54290.62518 58296.43757 49112.49131 45292.21797 66340.85799 46000.9171 52502.07645 1.278969227 1.201165988 1.348759784 1.034066247 1.110364418 0.935439027 0.862674794 1.263585414 0.876173291 1 15.68008686 -5.794362086 10.91350575 1.017317297 1.26872428 0.527107948 0.114673054 0.424230304 138.660383 0.031616623 0.047193127 1.61E-06 5.794362086 0.251406982 LNS(ph)STEANVIK ddPTM_A459_MK2206_30min_R1 1 LNSSTEANVIK 11 0 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 LNS(0.717)S(0.261)T(0.023)EANVIK 183.89 2.83E-05 6802500 3246.5 3304 3246.9 3115.4 3368.5 2600.6 3197.2 3049.7 3140.4 2984.7 TRUE FALSE 2970.368127 3088.908999 3026.509474 3355.348648 3234.325512 2747.843725 2983.920622 3023.036794 3466.855818 3354.467169 0.885496258 0.92083447 0.902232552 1.000262777 0.964184578 0.819159522 0.889536392 0.901197311 1.033504173 1 11.71186791 -8.259282429 24.71488874 1.016752096 0.911497394 0.460785058 0.046021991 150.6943884 1726758.037 0.037740523 0.012618665 5.50E-09 8.259282429 -0.105254702 LNSEAS(ph)PSR ddPTM_A459_MK2206_30min_R1 1 LNSEASPSR 9 0 Q13111;Q13111-3;Q13111-2;K7EJF1 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 LNS(0.002)EAS(0.499)PS(0.499)R 110.15 0.011018 63224000 5292.3 5559.6 5257.9 3534.8 4406.5 5372.4 6616.8 4547.5 2862.1 5987.1 TRUE FALSE 4842.162094 5197.669029 4901.008397 3807.050908 4230.979774 5676.580645 6175.405345 4507.741687 3159.625537 6728.827148 0.719614576 0.772447994 0.728359979 0.565782242 0.628784137 0.843621113 0.917753601 0.669914918 0.469565567 1 12.71613935 -6.752893234 24.99349558 0.768139636 0.683975398 0.098783828 0.144471054 581.2137762 1699776.947 0.050297678 0.049535411 1.77E-07 6.752893234 -0.084164239 LNSEASPS(ph)R ddPTM_A459_MK2206_30min_R1 1 LNSEASPSR 9 0 Q13111;Q13111-3;Q13111-2;K7EJF1 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 LNS(0.003)EAS(0.132)PS(0.866)R 92.906 0.025272 54966000 6308.6 5966.2 6436.2 4174.7 4517.4 5331.6 7860 4619.8 3476.7 5933.3 TRUE FALSE 5772.020442 5577.799296 5999.328676 4496.236117 4337.462392 5633.470585 7335.673741 4579.409576 3838.115406 6668.361998 0.865582949 0.836457184 0.899670515 0.674263952 0.650453949 0.844805754 1.100071313 0.686736799 0.575570943 1 12.70311671 -7.433347147 0.005488855 1.62288595 1.21E-06 0.012713346 0.156223348 63422.82872 247.0905206 36285.78022 36754.93924 3.69E-08 7.433347147 -1.622884735 LNSEASPS(ph)R ddPTM_A459_MK2206_30min_R2 3 LNSEASPSR 9 0 Q13111;Q13111-3;Q13111-2;K7EJF1 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 LNS(0.008)EAS(0.417)PS(0.575)R;LNS(0.001)EAS(0.234)PS(0.765)R;LNSEAS(0.029)PS(0.971)R 158.06 0.00086772 194889000 276370 289195 286577 328981 288648 336009 312416 258442 257966 318665 TRUE FALSE 297529.0997 274833.9968 296131.3341 302102.1999 277314.2292 348796.0579 271395.4039 292221.2568 280403.4164 308266.9871 0.965166924 0.891545343 0.960632654 0.980001792 0.899591071 1.131473925 0.88039075 0.947948593 0.909612213 1 18.23382087 -3.495545664 15.45850994 0.955296498 0.973967982 0 0.069779912 0 0 0.015343162 0 0.000319488 3.495545664 0.018671484 LNSHMNALHLGSQANR ddPTM_A459_MK2206_30min_R1 3 LNSHMNALHLGSQANR 16 0 P11413-3;P11413;P11413-2;E7EUI8;E9PD92;E7EM57 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ;; 115.58 0.0011216 175539000 4727.68 4227.51 4563.54 4370.41 5764.2 5104.7 5712.29 5395.2 3843.9 3618.77 FALSE TRUE 4325.56599 3952.298331 4253.77962 4707.019735 5534.599708 5393.723703 5331.233557 5348.030335 4243.487161 4067.090548 1.063552911 0.971775348 1.045902364 1.157343236 1.360825298 1.326187268 1.31082244 1.314952365 1.043371695 1 11.9897814 -5.877774679 3.216054669 1.251607233 1.018548669 0.351639393 0.117146599 0.229896498 4.708895816 0.033697032 0.053687993 1.33E-06 5.877774679 -0.233058564 LNSHMNALHLGSQANR ddPTM_A459_MK2206_30min_R2 2 LNSHMNALHLGSQANR 16 0 P11413-3;P11413;P11413-2;E7EUI8;E9PD92;E7EM57 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 114.54 0.0011734 29073000 33205 65629 46362 69655 70329 81032 69396 46000 71495 44761 FALSE TRUE 35747.20033 62369.95929 47907.68594 63963.96368 67567.53009 84115.72954 60284.22184 52012.35794 77713.50587 43300.45224 0.825561824 1.44039972 1.106401515 1.47721237 1.560434744 1.942606259 1.392230767 1.201196645 1.794750444 1 15.40209447 -4.311842959 0.929772029 1.493425678 9.66E-10 0.2853511 0.279435896 5.883883387 2.20156135 0.092751946 10.92799974 4.88E-05 4.311842959 -1.493425677 LNSPPS(ph)SIYK ddPTM_A459_MK2206_30min_R2 1 LNSPPSSIYK 10 0 C9JKH7;Q53EP0-2;Q53EP0 C9JKH7 FNDC3B Fibronectin type III domain-containing protein 3B 1 LNS(0.101)PPS(0.701)S(0.197)IYK 85.672 0.036135 9734100 92856 79847 73719 67205 71345 67934 105030 49320 72768 56390 TRUE FALSE 99965.12675 75881.91409 76176.75467 61714.13652 68543.63682 70519.27597 91239.43484 55766.29334 79097.22911 54549.99892 1.832541315 1.391052532 1.396457492 1.131331581 1.256528656 1.29274569 1.672583623 1.022296873 1.449995063 1 15.73529155 -4.442906238 1.544387408 1.284408822 2.56529296 0.432702172 0.190569785 2.614117419 2.989605075 0.051020933 6.558131474 3.61E-05 4.442906238 1.280884138 LNSPPSS(ph)IYK ddPTM_A459_MK2206_30min_R2 1 LNSPPSSIYK 10 0 C9JKH7;Q53EP0-2;Q53EP0 C9JKH7 FNDC3B Fibronectin type III domain-containing protein 3B 1 LNS(0.109)PPS(0.273)S(0.617)IYK 96.334 0.021809 19187000 78805 44109 51871 43175 40115 44880 94494 39745 53627 53442 TRUE FALSE 84838.37139 41918.6112 53600.35325 39647.46439 38539.88354 46587.93985 82086.82429 44939.80796 58291.37952 51698.19192 1.641031693 0.810833216 1.036793576 0.766902341 0.745478364 0.901152209 1.587808417 0.869272334 1.127532267 1 15.6578262 -4.752155053 24.99263882 0.982647668 1.641032983 0.418256873 0.232863719 386.5725568 1040546.57 0.060086551 0.738040627 1.77E-05 4.752155053 0.658385315 LNSS(ph)GSSEDSFVEIR ddPTM_A459_MK2206_30min_R2 1 LNSSGSSEDSFVEIR 15 0 Q96CV9-3;Q96CV9-2;Q96CV9;A0A087WY28 Q96CV9-3 OPTN Optineurin 1 LNS(0.095)S(0.898)GS(0.005)S(0.002)EDSFVEIR 99.238 0.013261 0 5762.8 5790.5 5907.6 8771.1 7731.8 9732.7 6047.9 6593.5 7158.8 6301.2 TRUE FALSE 6204.004399 5502.95219 6104.556435 8054.473073 7428.210683 10103.08472 5253.803465 7455.293089 7781.459484 6095.59236 1.017785316 0.902775623 1.001470583 1.321360189 1.218619987 1.657441004 0.861902036 1.223062936 1.2765715 1 12.57355071 -5.671825756 6.000127956 1.234445821 0.959928526 0.249348178 0.197390147 0.275125967 14.79024194 0.053372771 0.093094139 2.13E-06 5.671825756 -0.274517295 LNSS(ph)IVEPK ddPTM_A459_MK2206_30min_R2 1 LNSSIVEPK 9 0 Q00653-3;Q00653-4;Q00653 Q00653-3 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit 1 LNS(0.031)S(0.969)IVEPK 124.39 0.0053263 6067600 71766 69632 64816 54701 69276 51299 74935 45422 43432 68988 TRUE FALSE 77260.46014 66174.17613 66976.93309 50231.75332 66555.87616 53251.21939 65095.94449 51358.81136 47209.63685 66736.92721 1.157686807 0.991567621 1.003596298 0.752683041 0.997287093 0.797927349 0.975411174 0.769571113 0.707399019 1 16.02619764 -2.908919242 0.579384203 0.845801335 3.813892853 0.433780815 0.104957237 25.78853606 1.121733514 0.04812537 81.51412356 0.001233334 2.908919242 2.968091519 LNSSNSAS(ph)PHR ddPTM_A459_MK2206_30min_R2 2 LNSSNSASPHR 11 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 LNSSNS(0.001)AS(0.999)PHR;LNSSNS(0.004)AS(0.996)PHR 137.73 0.00086616 8186200 27137 28910 24454 37739 29961 34727 41426 33521 28935 33883 TRUE FALSE 29214.62958 27474.37144 25269.28415 34655.60298 28784.5806 36048.56032 35986.71644 37902.30979 31451.714 32777.40048 0.891304043 0.838210811 0.770936187 1.057301753 0.878183754 1.099799245 1.097912461 1.156354965 0.959554862 1 15.00041382 -6.211315092 1.180178988 1.06997839 0.839273035 0.496648376 0.086293819 0.367411251 1.051308088 0.03454727 0.053425007 6.15E-07 6.211315092 -0.230705355 LNSSSSSSSNSSNEREDFDSTSSS(ph)SSTPPLQPR ddPTM_A459_MK2206_30min_R2 1 LNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR 33 1 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 LNSSSSSSSNSSNEREDFDS(0.064)T(0.064)S(0.064)S(0.064)S(0.22)S(0.22)S(0.22)T(0.086)PPLQPR 72.469 2.58E-05 7627600 6395.6 10482 8032.6 11357 9494.9 11403 8061.6 7969.4 8181.2 7946.9 TRUE FALSE 6885.252053 9961.479122 8300.402875 10429.09677 9122.082518 11836.94916 7003.102236 9011.027943 8892.785988 7687.593304 0.895631673 1.295786435 1.079714099 1.356614009 1.186597958 1.539747056 0.910961592 1.17215201 1.156771129 1 12.9083163 -8.545976629 0.832899524 1.009368274 1.204085282 0.079269376 0.183602595 1.755252957 2.706766471 0.172396518 0.062032366 2.84E-09 8.545976629 0.194717008 LNSSSSSSSNSSNEREDFDSTSSSSS(ph)TPPLQPR ddPTM_A459_MK2206_30min_R1 1 LNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR 33 1 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 LNSSSSSSSNSSNEREDFDS(0.073)T(0.073)S(0.073)S(0.073)S(0.073)S(0.073)S(0.282)T(0.282)PPLQPR 58.087 0.00049669 6891400 525.2 243.46 596.17 348.39 594.71 364.74 413.93 447.61 436.9 353.95 TRUE FALSE 480.5289821 227.6107097 555.7036414 375.2230582 571.0214414 385.3912636 386.317485 443.696593 482.3173185 397.7999982 1.207966275 0.572173732 1.396942293 0.9432455 1.435448577 0.9688066 0.971134959 1.115376056 1.212461842 1 8.635899459 -5.268606805 24.99595234 1.127294957 0.890070002 0.162278686 0.218348958 860.1372149 2999682.602 0.053279438 0.114756026 5.39E-06 5.268606805 -0.237224956 LNSSSSSSSNSSNEREDFDSTSSSSST(ph)PPLQPR ddPTM_A459_MK2206_30min_R1 1 LNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR 33 1 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 LNSSSSSSSNSSNEREDFDS(0.017)T(0.017)S(0.054)S(0.054)S(0.054)S(0.043)S(0.176)T(0.586)PPLQPR 85.412 4.07E-08 6713600 415.2 278.54 324.13 261.05 385.92 401.25 398.62 240.05 335.1 172 TRUE FALSE 379.8850597 260.4069954 302.1289587 281.1561162 370.5479892 423.9684282 372.0287871 237.9512682 369.9348442 193.3086585 1.965173534 1.347104663 1.562935468 1.454441401 1.916872177 2.193220063 1.924532455 1.230939524 1.913700333 1 7.594762449 -11.03943651 3.004471451 0.975026321 1.710494254 0.348588723 0.296132413 184753852.1 208592202.7 37851850.4 0.077034467 9.13E-12 11.03943651 0.735467933 LNT(ph)SDFQK ddPTM_A459_MK2206_30min_R1 3 LNTSDFQK 8 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 LNT(0.5)S(0.5)DFQK;LNT(0.812)S(0.188)DFQK;LNT(0.5)S(0.5)DFQK 138.76 0.0057236 148699000 1585.04 1854.59 2164.04 3103.86 8646.5 15394.3 25849.9 32144 35087 31417 TRUE FALSE 1450.224025 1733.855854 2017.150994 3342.919835 8302.091596 16265.91196 24125.50034 31862.9684 38734.41921 35309.17515 0.041072158 0.049104966 0.057128239 0.094675671 0.235125617 0.46067097 0.683264342 0.902399115 1.097007196 1 15.1077555 -7.207798217 0.927890144 1.067337224 0.037342171 0.991201971 0.037910704 0.046965453 0.079665682 0.028132007 0.016965627 6.20E-08 7.207798217 -1.029995052 down LNT(ph)SDFQK ddPTM_A459_MK2206_30min_R2 1 LNTSDFQK 8 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 LNT(0.936)S(0.064)DFQK 109.16 0.029397 5637500 6415 7027.1 9604.3 12586 33966 38326 85400 63145 70931 101510 TRUE FALSE 6906.137332 6678.144432 9924.502568 11557.68354 32632.32417 39784.52279 74186.87742 71398.26831 77100.45017 98197.73701 0.070328885 0.068007111 0.10106651 0.117698064 0.332312385 0.405147043 0.755484593 0.727086698 0.785155061 1 16.58340216 -7.055856451 0.70410778 0.929831174 0.033143962 0.971756331 0.056271766 0.106140847 0.109095504 0.045469041 0.034980777 8.79E-08 7.055856451 -0.896687211 down LNTS(ph)DFQK ddPTM_A459_MK2206_30min_R1 3 LNTSDFQK 8 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 LNT(0.072)S(0.928)DFQK;LNT(0.081)S(0.919)DFQK;LNT(0.469)S(0.531)DFQK 138.99 0.0024329 532183000 2225.85 2612.85 3032.64 4322.5 14083.7 26423.9 45826 56957 59758 53980 TRUE FALSE 2036.529769 2442.75299 2826.792846 4655.419699 13522.71641 27919.99838 42769.03115 56459.03095 65970.05795 60667.44993 0.033568739 0.040264639 0.046594885 0.076736697 0.222899041 0.460213812 0.704974928 0.930631352 1.087404498 1 15.88863505 -7.17906652 0.983934721 1.063010821 0.029014168 0.993566125 0.033060104 0.038582017 0.074037538 0.023635542 0.014474865 6.62E-08 7.17906652 -1.033996653 down LNTS(ph)DFQK ddPTM_A459_MK2206_30min_R2 4 LNTSDFQK 8 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 LNT(0.085)S(0.915)DFQK;LNT(0.097)S(0.903)DFQK;LNT(0.097)S(0.903)DFQK;LNT(0.08)S(0.92)DFQK 127.83 0.0044828 770030000 164266 138766 191783 302574 1104860 1387920 3358430 2731720 2550810 3551760 TRUE FALSE 176842.3313 131875.0822 198176.9495 277852.7363 1061477.645 1440738.268 2917464.107 3088765.183 2772674.843 3435866.362 0.051469502 0.038381901 0.057678888 0.080868319 0.308940318 0.419323139 0.849120367 0.898977102 0.806979827 1 21.71224249 -6.964367286 1.161214679 0.928149508 0.043171 0.974847056 0.059975331 0.065727815 0.183044236 0.033924103 0.025220751 1.09E-07 6.964367286 -0.884978507 down LNTVAS(ph)PK ddPTM_A459_MK2206_30min_R1 1 LNTVASPK 8 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LNT(0.003)VAS(0.997)PK 97.452 0.020258 34344000 5950.4 7366.2 7311.5 5230.7 4205.8 3930.8 5498.8 4575.6 7587.1 7591.5 TRUE FALSE 5444.287233 6886.659041 6815.215751 5633.56942 4038.27408 4153.358499 5131.985085 4535.596012 8375.806196 8531.992333 0.638102687 0.8071572 0.798783623 0.66028768 0.473309624 0.486798199 0.601499027 0.531598698 0.98169406 1 13.05866695 -8.272226039 23.91781669 0.990847235 0.627348187 0.648168301 0.107892516 319.7241731 708927.2398 0.115801566 0.031236218 5.34E-09 8.272226039 -0.363499048 LNTVAS(ph)PK ddPTM_A459_MK2206_30min_R2 2 LNTVASPK 8 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LNTVAS(1)PK;LNT(0.003)VAS(0.997)PK 119.27 0.0079577 21569000 290490 217470 250510 205225 205253 133192 226170 212830 159534 253770 TRUE FALSE 312730.1377 206670.756 258861.8784 188457.461 197193.7359 138260.7149 196473.6073 240647.6118 173409.9789 245489.5057 1.273904303 0.841872061 1.054472278 0.767680315 0.803267477 0.563204177 0.800334038 0.980276575 0.706384489 1 17.90530183 -1.52289143 0.876966549 0.803025561 190.8079025 0.463903588 0.140238976 703.9848729 1.725890337 0.047368439 267342.6653 0.029999124 1.52289143 190.004877 LNVSDENTASCPLS(ph)PIK ddPTM_A459_MK2206_30min_R1 1 LNVSDENTASCPLSPIK 17 0 Q8N3X6-3 Q8N3X6-3 1 LNVSDENT(0.012)AS(0.012)CPLS(0.976)PIK 69.188 0.034851 3843100 1159.8 1657.4 1748.2 1168.5 966.75 1162.8 1294.3 1103.8 1522.6 1627.4 TRUE FALSE 1061.15292 1549.502959 1629.537055 1258.498072 928.2423004 1228.636731 1207.959609 1094.149593 1680.879719 1829.014598 0.580177392 0.84717911 0.890937151 0.688074373 0.507509509 0.671747909 0.660442847 0.598218075 0.919008367 1 10.83685087 -8.407322298 4.634608297 0.996080163 0.687278701 0.512394571 0.109779994 0.190061073 5.922925022 0.115311141 0.030129089 3.91E-09 8.407322298 -0.308801462 LNVSDENTASCPLS(ph)PIK ddPTM_A459_MK2206_30min_R2 3 LNVSDENTASCPLSPIK 17 0 Q8N3X6-3 Q8N3X6-3 1 LNVSDENTASCPLS(1)PIK;LNVSDENTASCPLS(1)PIK;LNVSDENTAS(0.001)CPLS(0.999)PIK 226.14 9.18E-21 4769200 73486.2 79080.6 66922.3 74861.5 74235.9 52293 79493.9 63237.6 52281.6 76136.7 TRUE FALSE 79112.35997 75153.5724 69153.45608 68745.07598 71321.02556 54283.04676 69056.25544 71502.97145 56828.95906 73652.36571 1.07413196 1.020382328 0.93891697 0.933372273 0.968346704 0.737017015 0.937597249 0.970817037 0.771583621 1 16.16844424 -5.005837747 0.890829818 0.891287884 1.141244352 0.350693711 0.080254212 1.852778497 1.451521844 0.028879916 0.421953986 9.87E-06 5.005837747 0.249956468 LNYSDES(ph)PEAGK ddPTM_A459_MK2206_30min_R1 2 LNYSDESPEAGK 12 0 Q9GZR1-2;Q9GZR1 Q9GZR1-2 SENP6 Sentrin-specific protease 6 1 LNYS(0.004)DES(0.996)PEAGK;LNYS(0.002)DES(0.998)PEAGK 108.66 0.0079662 16446200 5500.1 5942.5 5287.4 4756 4564 4301.6 5198.7 4731.2 5349.3 4982.9 TRUE FALSE 5032.287613 5555.64217 4928.50602 5122.307944 4382.206216 4545.152875 4851.904209 4689.835617 5905.378878 5600.219271 0.898587603 0.992040115 0.880055902 0.914662033 0.782506185 0.811602663 0.866377542 0.837437856 1.054490653 1 12.4512676 -8.263370675 24.99927453 1.027245343 0.873235137 0.548559815 0.056003106 144.3758445 1868768.293 0.050726336 0.015583345 5.45E-09 8.263370675 -0.154010206 LNYSDES(ph)PEAGK ddPTM_A459_MK2206_30min_R2 4 LNYSDESPEAGK 12 0 Q9GZR1-2;Q9GZR1 Q9GZR1-2 SENP6 Sentrin-specific protease 6 1 LNYS(0.108)DES(0.892)PEAGK;LNYS(0.007)DES(0.993)PEAGK;LNYS(0.002)DES(0.998)PEAGK;LNYS(0.029)DES(0.971)PEAGK 187.08 0.00011454 16737700 150612 138696 155305 143470 153038 115918 168588 125808 114192 153512 TRUE FALSE 162142.9705 131808.5583 160482.7912 131748.0421 147028.9592 120329.3407 146452.1931 142251.5376 124124.2137 148502.916 1.091850415 0.88758229 1.080670976 0.887174781 0.99007456 0.81028268 0.986190689 0.957904002 0.835836878 1 17.18013173 -5.77852522 24.99731708 0.922785112 1.006789368 0.227277333 0.08008291 371.3362948 543279.729 0.021213522 0.0315542 1.67E-06 5.77852522 0.084004256 LPALGEAHVS(ph)PEVATADK ddPTM_A459_MK2206_30min_R1 2 LPALGEAHVSPEVATADK 18 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 LPALGEAHVS(0.956)PEVAT(0.044)ADK;LPALGEAHVS(1)PEVATADK 106.47 0.0010972 24670000 8943.1 9059 10129 6508.4 7114.2 7974.5 11144.9 7072.7 12848.5 17806.8 TRUE FALSE 8182.442383 8469.257453 9441.471701 7009.678096 6830.826349 8426.009299 10401.44406 7010.86413 14184.14755 20012.84082 0.408859615 0.423191167 0.471770689 0.350259024 0.341322175 0.421030146 0.519738509 0.350318288 0.70875233 1 14.28863835 -8.513541735 2.979131289 0.998831995 0.41302175 0.921264193 0.055072502 0.059394168 1.281842862 0.054427422 0.014540538 3.07E-09 8.513541735 -0.585810244 down LPALGEAHVS(ph)PEVATADK ddPTM_A459_MK2206_30min_R2 3 LPALGEAHVSPEVATADK 18 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 LPALGEAHVS(0.998)PEVAT(0.002)ADK;LPALGEAHVS(0.972)PEVAT(0.028)ADK;LPALGEAHVS(1)PEVATADK 125.75 0.00053607 24195800 163625 104639 110598 103866 91142 77974 117020 97951 70140 125401 TRUE FALSE 176152.2558 99442.77942 114285.2821 95379.81555 87563.30713 80941.35521 101655.1334 110753.532 76240.65042 121309.1756 1.452093421 0.81974656 0.94209924 0.786253926 0.721819324 0.667231929 0.837983878 0.912985612 0.628482141 1 16.88832915 -2.785035628 1.425944057 0.794019306 199.9981996 0.726062607 0.116361565 212.5678749 1.889233583 0.031938078 137134.2742 0.001640455 2.785035628 199.2041802 LPALGEAHVSPEVAT(ph)ADK ddPTM_A459_MK2206_30min_R2 1 LPALGEAHVSPEVATADK 18 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 LPALGEAHVS(0.071)PEVAT(0.929)ADK 80.719 0.014953 6464300 43942 33496 39753 30489 26342 24108 35589 28910 23290 38497 TRUE FALSE 47306.23331 31832.63735 41078.34518 27997.95117 25307.68072 25025.44683 30916.12155 32688.63626 25315.7221 37240.84604 1.270278158 0.854777502 1.103045434 0.751807602 0.679567824 0.671989213 0.830167003 0.877762987 0.679783753 1 15.18459823 -5.764997307 24.99994568 0.77219673 1.053908107 0.49049686 0.135225799 74.60883462 524247.9632 0.036344405 0.056395705 1.72E-06 5.764997307 0.281711377 LPDLS(ph)PVENK ddPTM_A459_MK2206_30min_R1 3 LPDLSPVENK 10 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 LPDLS(1)PVENK;LPDLS(1)PVENK;LPDLS(1)PVENK 166.24 0.00033229 74066000 10883.3 11917 11894 8917 8616 8781.7 11027.7 8365 11930.9 12343.4 TRUE FALSE 9957.618185 11141.20113 11086.66842 9603.788885 8272.806475 9278.912265 10292.06225 8291.865687 13171.15975 13872.59358 0.717790666 0.803108739 0.799177771 0.692285032 0.596341731 0.668866439 0.741898924 0.597715607 0.949437441 1 13.75994991 -8.371525144 5.592080598 0.9939091 0.705563155 0.724280859 0.067426208 0.12890209 5.296609239 0.070476851 0.018337914 4.25E-09 8.371525144 -0.288345945 LPDLS(ph)PVENK ddPTM_A459_MK2206_30min_R2 5 LPDLSPVENK 10 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 LPDLS(1)PVENK;LPDLS(1)PVENK;LPDLS(1)PVENK;LPDLS(1)PVENK;LPDLS(1)PVENK 165.35 0.00035915 40040100 248742 214957 219753 202435 209700 169308 223978 205585 170196 241466 TRUE FALSE 267785.8788 204282.548 227079.4553 185895.4129 201466.1243 175751.1346 194569.4196 232455.6654 184999.3404 233586.9842 1.146407535 0.874545937 0.972140876 0.7958295 0.862488657 0.752401232 0.832963447 0.995156756 0.79199336 1 17.83360036 -2.291740642 1.277180462 0.862646717 199.972766 0.471870126 0.084678256 884.6624041 2.723075729 0.024062019 514624.6427 0.0051081 2.291740642 199.1101193 LPDS(ph)DDDEDEETAIQR ddPTM_A459_MK2206_30min_R1 1 LPDSDDDEDEETAIQR 16 0 H3BRF9;Q96K21-3;Q96K21-2;Q96K21;H3BRM1;Q96K21-4 H3BRF9 ZFYVE19 Abscission/NoCut checkpoint regulator 1 LPDS(1)DDDEDEETAIQR 203.05 4.05E-07 11114000 838.36 851.52 961.33 698.1 963.35 847.62 795.99 778.48 969.71 844.21 TRUE FALSE 767.0530796 796.0858932 896.077598 751.867783 924.9777296 895.6115119 742.8909595 771.6738314 1070.514825 948.7971083 0.808447953 0.839047554 0.944435423 0.792443165 0.974895182 0.943944184 0.782981897 0.813318068 1.128286348 1 9.889955803 -7.577403674 0.023448076 1.824083808 0.002065219 0.228853397 0.094752581 362.0519232 6.986911244 264.9962218 275.6181634 2.65E-08 7.577403674 -1.822018589 LPDS(ph)DDDEDEETAIQR ddPTM_A459_MK2206_30min_R2 4 LPDSDDDEDEETAIQR 16 0 H3BRF9;Q96K21-3;Q96K21-2;Q96K21;H3BRM1;Q96K21-4 H3BRF9 ZFYVE19 Abscission/NoCut checkpoint regulator 1 LPDS(1)DDDEDEETAIQR;LPDS(1)DDDEDEETAIQR;LPDS(1)DDDEDEETAIQR;LPDS(1)DDDEDEETAIQR 284.44 5.21E-63 106603000 20819.9 15220.9 18343.3 21582 16641.2 19247 22287.9 12387.9 15023.4 14040.7 TRUE FALSE 22413.88755 14465.05224 18954.85647 19818.68156 15987.78287 19979.45807 19361.47196 14007.04106 16330.10818 13582.55311 1.650196938 1.064972993 1.395529715 1.459127853 1.177082301 1.470964841 1.425466317 1.031252442 1.202285612 1 13.72946707 -7.761920531 24.99999909 1.087576724 1.365296189 0.423277742 0.159778593 12.93737824 672067.24 0.077332627 0.040717148 1.73E-08 7.761920531 0.277719465 LPDVKPS(ph)PINLR ddPTM_A459_MK2206_30min_R2 1 LPDVKPSPINLR 12 1 A2AJT9-3;A2AJT9-2;A2AJT9;H7BXX2 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 LPDVKPS(1)PINLR 64.407 0.044775 8837900 38402 37955 35872 32870 32706 27717 36410 32346 20629 32995 TRUE FALSE 41342.08665 36070.20989 37067.95458 30184.41585 31421.79811 28771.78986 31629.32326 36573.73326 22423.27313 31918.37585 1.295244057 1.130076607 1.161335863 0.945675181 0.984442261 0.901417728 0.990944007 1.145851952 0.70251924 1 14.96209962 -5.323115753 1.087449287 0.954363197 1.298257201 0.504662608 0.110442799 0.706590321 1.219168546 0.036374531 0.227387982 4.75E-06 5.323115753 0.343894004 LPEASQS(ph)PLVLK ddPTM_A459_MK2206_30min_R1 2 LPEASQSPLVLK 12 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 LPEAS(0.019)QS(0.981)PLVLK;LPEAS(0.407)QS(0.593)PLVLK 132.24 0.0019111 30238000 3120.4 3349.2 3074.8 2929 3567.5 3069.4 2959.7 2911.9 2945 2352.71 TRUE FALSE 2854.993594 3131.166471 2866.091143 3154.592088 3425.398921 3243.186775 2762.263813 2886.441565 3251.143289 2644.181477 1.079726796 1.184172304 1.083923765 1.193031611 1.295447741 1.226537136 1.044657425 1.091620069 1.229546201 1 11.36860548 -10.61842848 5.369792774 0.999997789 1.158981741 0.276021139 0.077125023 2.16E-06 3.64E-07 0.079162997 0.01919958 2.41E-11 10.61842848 0.158983952 LPEASQS(ph)PLVLK ddPTM_A459_MK2206_30min_R2 4 LPEASQSPLVLK 12 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 LPEAS(0.059)QS(0.941)PLVLK;LPEAS(0.071)QS(0.929)PLVLK;LPEAS(0.001)QS(0.999)PLVLK;LPEAS(0.002)QS(0.998)PLVLK 159.41 0.00046316 37431000 118046 138098 112444 143002 123636 115482 132405 112956 97902 116205 TRUE FALSE 127083.6925 131240.2541 116192.8268 131318.2792 118781.4294 119876.7484 115020.0645 127719.737 106417.339 112413.2404 1.130504664 1.167480394 1.033622254 1.168174485 1.056649813 1.066393496 1.023189653 1.136162756 0.946661965 1 16.77845244 -6.12401799 0.235037262 0.982113802 1.206835177 0.40398637 0.05508662 5.882307909 0.516588451 0.101275487 0.392893408 7.52E-07 6.12401799 0.224721375 LPEGPVDS(ph)EDDEEEDEEIDRTDPLQGR ddPTM_A459_MK2206_30min_R1 2 LPEGPVDSEDDEEEDEEIDRTDPLQGR 27 1 E9PCH4;Q8TEU7;Q8TEU7-4;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RD23;D6RIH0;D6RB02;Q8TEU7-6 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 LPEGPVDS(1)EDDEEEDEEIDRTDPLQGR;LPEGPVDS(0.998)EDDEEEDEEIDRT(0.002)DPLQGR 130.26 3.37E-12 8948900 547.2 383.719 351.53 142.83 442.44 239.801 605.32 471.7 239.61 421.81 TRUE FALSE 500.6577665 358.7388234 327.669123 153.8307913 424.8166779 253.3783254 564.9402073 467.5759766 264.518317 474.0670073 1.056090719 0.756725986 0.69118736 0.324491663 0.896111038 0.534477872 1.191688514 0.986307778 0.557976642 1 8.888947182 -7.246776469 24.76727988 0.932852245 0.702080465 0.178927825 0.234868936 1263.51046 2134212.036 0.090944018 0.070123501 5.67E-08 7.246776469 -0.230771779 LPEGPVDS(ph)EDDEEEDEEIDRTDPLQGR ddPTM_A459_MK2206_30min_R2 1 LPEGPVDSEDDEEEDEEIDRTDPLQGR 27 1 E9PCH4;Q8TEU7;Q8TEU7-4;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RD23;D6RIH0;D6RB02;Q8TEU7-6 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 LPEGPVDS(1)EDDEEEDEEIDRTDPLQGR 114.76 4.71E-12 3441200 5629.6 6654.9 7244.3 8328.7 7439.7 6324.2 7784.4 4945.1 6226.5 8588.7 TRUE FALSE 6060.606504 6324.427343 7485.821346 7648.218568 7147.579997 6564.871863 6762.298929 5591.441549 6768.069715 8308.451422 0.729450796 0.761204107 0.90098876 0.920534788 0.860278244 0.790143858 0.813906056 0.672982396 0.814600624 1 13.02036389 -6.773970837 24.31443169 0.797611694 0.83889432 0 0.0927875 650.2561438 1261662.606 0.033166048 0.029460794 1.68E-07 6.773970837 0.041282626 LPEGS(ph)PTWLGISCSSYER ddPTM_A459_MK2206_30min_R2 1 LPEGSPTWLGISCSSYER 18 0 B8ZZS2;Q13506-2;Q13506;C9JJ42;C9JL92;C9JID4 B8ZZS2 NAB1 NGFI-A-binding protein 1 1 LPEGS(0.972)PT(0.028)WLGISCSSYER 94.922 0.0087983 0 1156.6 2526 3052.6 1206.3 3090.6 2714.4 2220.7 2216.1 1368.1 2449.1 TRUE FALSE 1245.150185 2400.562513 3154.37216 1107.741431 2969.247515 2817.698394 1929.119422 2505.751879 1487.094865 2369.186068 0.525560319 1.013243555 1.331415968 0.467562023 1.253277468 1.189310723 0.81425408 1.057642501 0.627681753 1 11.21017579 -4.758926684 24.90586196 0.980519614 0.52555969 0.212765052 0.257639556 100.6065794 996995.247 0.061759064 0.407130549 1.74E-05 4.758926684 -0.454959923 LPEPSVLSEVTKPPPCLENS(ph)SPPSR ddPTM_A459_MK2206_30min_R2 1 LPEPSVLSEVTKPPPCLENSSPPSR 25 1 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 LPEPSVLSEVTKPPPCLENS(0.412)S(0.412)PPS(0.176)R 47.554 0.028922 11715000 27398 24488 24701 24850 21167 18327 26749 16679 18503 25719 TRUE FALSE 29495.61195 23271.96153 25524.51901 22819.67551 20335.87722 19024.44683 23236.82417 18859.00257 20112.35749 24879.79114 1.185524902 0.935376081 1.025913717 0.91719723 0.817365271 0.764654604 0.933963796 0.758004859 0.808381284 1 14.60268675 -3.094268099 0.560845714 0.835867977 3.196347584 0.569186575 0.08344865 15.73965407 0.827564841 0.040202992 36.517477 0.000804881 3.094268099 2.360479607 LPEPSVLSEVTKPPPCLENSS(ph)PPSR ddPTM_A459_MK2206_30min_R2 1 LPEPSVLSEVTKPPPCLENSSPPSR 25 1 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 LPEPSVLSEVTKPPPCLENS(0.301)S(0.399)PPS(0.301)R 61.963 0.0027599 9846300 19947 16765 17053 23283 15840 15835 21996 17749 12452 21853 TRUE FALSE 21474.15766 15932.47448 17621.53851 21380.70442 15218.04201 16437.61202 19107.89878 20068.85524 13535.05245 21139.9384 1.01580985 0.753667025 0.833566218 1.011389154 0.719871635 0.777561964 0.903876748 0.949333667 0.640259787 1 14.36768355 -4.741487218 24.7165873 0.842630569 1.015810546 0.163906702 0.116891207 2335.224176 2892685.754 0.027954532 1.092121323 1.81E-05 4.741487218 0.173179977 LPFPIIDDR ddPTM_A459_MK2206_30min_R1 1 LPFPIIDDR 9 0 P30041 P30041 PRDX6 Peroxiredoxin-6 0 157.33 0.011849 4390200 1958.7 2012.3 1761 1492.3 1719.9 1704.6 1891.8 1417.4 1774.8 1937.6 FALSE TRUE 1792.102279 1881.298904 1641.468226 1607.237205 1651.392741 1801.112979 1765.601474 1405.007821 1959.296811 2177.644516 0.822954466 0.863914606 0.753781535 0.738062247 0.758338989 0.827092285 0.810784984 0.645196133 0.899732163 1 11.08855275 -11.16045952 4.287957323 1.005948628 0.78696303 0.456811334 0.068206404 0.003876538 0.000327646 0.06600256 0.01562689 6.91E-12 11.16045952 -0.218985598 LPFPIIDDR ddPTM_A459_MK2206_30min_R2 1 LPFPIIDDR 9 0 P30041 P30041 PRDX6 Peroxiredoxin-6 0 143.89 0.027623 7106500 10465 10221 9501.4 10376 8788.3 9269.9 11729 11057 6797.5 10380 FALSE TRUE 11266.20845 9713.440003 9818.171934 9528.247609 8443.227184 9622.67254 10188.96821 12502.18786 7388.734263 10041.30145 1.121986876 0.96734871 0.977778825 0.948905643 0.840849886 0.958309298 1.014705938 1.24507644 0.735834324 1 13.29365865 -10.20297929 15.25363972 1.000005806 0.981922428 0.001852223 0.131255823 0 0 0.123345162 0.029915596 6.27E-11 10.20297929 -0.018083378 LPGPPPAS(ph)PIPTEGPR ddPTM_A459_MK2206_30min_R1 1 LPGPPPASPIPTEGPR 16 0 Q9H6A9-3;Q9H6A9 Q9H6A9-3 PCNXL3 Pecanex-like protein 3 1 LPGPPPAS(0.847)PIPT(0.153)EGPR 102.03 0.0051602 8835900 541.65 621.51 661.04 350.67 506.49 702.49 587.59 565.22 489.5 639.78 TRUE FALSE 495.5798232 581.049586 616.1704466 377.6786642 486.3154308 742.2643767 548.3929432 560.2783411 540.3852767 719.0407765 0.689223531 0.808089896 0.856933941 0.525253472 0.676339154 1.03229803 0.76267294 0.779202459 0.751536344 1 9.489929777 LPGPPPAS(ph)PIPTEGPR ddPTM_A459_MK2206_30min_R2 1 LPGPPPASPIPTEGPR 16 0 Q9H6A9-3;Q9H6A9 Q9H6A9-3 PCNXL3 Pecanex-like protein 3 1 LPGPPPAS(0.999)PIPT(0.001)EGPR 119.04 0.0017145 5273500 5075.4 5548.7 4124.2 4362.5 7650.3 5683.3 4622.3 4023.6 4254.9 5174.9 TRUE FALSE 5463.976526 5273.159627 4261.69877 4006.069795 7349.910782 5899.581964 4015.386458 4549.498335 4624.983511 5006.043437 1.091476052 1.053358744 0.851310785 0.800246711 1.468207553 1.178491964 0.802107794 0.90880121 0.92388002 1 12.28945509 -7.26377859 24.93337324 0.901097362 1.068290872 0.172543602 0.176614062 417.0607413 4445360.974 0.078023419 0.055466629 5.45E-08 7.26377859 0.16719351 LPIAHT(ph)PPPPPAPPLPLPEDPGTLSAER ddPTM_A459_MK2206_30min_R2 1 LPIAHTPPPPPAPPLPLPEDPGTLSAER 28 0 A0A286YF23;A0A0J9YY01;A0A2R8YFM0;Q96JP2 A0A286YF23 MYO15B Unconventional myosin-XVB 1 LPIAHT(1)PPPPPAPPLPLPEDPGTLSAER 65.811 0.015663 0 2092 1051.7 611.66 2320.5 1075 1778.6 1163.4 907.24 997.49 1041.4 TRUE FALSE 2252.165128 999.4741073 632.0524391 2130.907727 1032.790099 1846.285869 1010.644183 1025.819383 1084.249877 1007.419203 2.235578914 0.992113416 0.627397648 2.115214521 1.02518405 1.832688779 1.003201229 1.01826467 1.076264849 1 9.976448421 -7.349638156 24.99936885 1.025952033 1.420217335 0.168409702 0.478501622 153.9519874 43632.29686 0.197319269 0.133032631 4.47E-08 7.349638156 0.394265302 LPIGDVATQYFADR ddPTM_A459_MK2206_30min_R2 2 LPIGDVATQYFADR 14 0 Q99832-2;Q99832-4;Q99832-3;Q99832 Q99832-2 CCT7 T-complex protein 1 subunit eta 0 ; 135.1 0.0083948 4972600 4385.1 8127.6 5076.5 7921.8 6862.2 6905.7 5034.3 5101.1 2923.23 7053.9 FALSE TRUE 4720.826628 7723.995203 5245.747976 7274.563599 6592.755548 7168.501253 4373.290363 5767.831285 3177.487261 6823.731821 0.69182476 1.131931237 0.768750607 1.066068215 0.966151033 1.050525056 0.640894232 0.845260546 0.465652424 1 12.73634523 -7.263532678 24.99889568 0.725056843 0.952666083 0.242575001 0.179174231 243.6419597 2909627.853 0.066936225 0.047659787 5.45E-08 7.263532678 0.22760924 LPISSS(ph)TSNLHVDR ddPTM_A459_MK2206_30min_R1 3 LPISSSTSNLHVDR 14 0 Q86TV6;Q86TV6-2;G3V3H1 Q86TV6 TTC7B Tetratricopeptide repeat protein 7B 1 LPIS(0.001)S(0.029)S(0.942)T(0.029)SNLHVDR;LPIS(0.001)S(0.003)S(0.952)T(0.044)SNLHVDR;LPIS(0.001)S(0.01)S(0.733)T(0.128)S(0.128)NLHVDR 180.1 4.70E-05 15685800 5145.17 4247.15 4315.08 3553.39 5927.52 5352.79 5682.04 3985.42 4109.18 3811.95 TRUE FALSE 4707.546273 3970.659763 4022.184392 3827.072713 5691.414327 5655.860344 5303.001479 3950.575893 4536.343966 4284.203145 1.098814905 0.926814072 0.938840726 0.89329861 1.328465092 1.320166237 1.237803461 0.922126183 1.05885361 1 12.06481117 -6.239682263 24.95757597 1.154117 0.95992569 0.303941811 0.133000114 1045.73676 1199564.204 0.043042769 0.055519467 5.76E-07 6.239682263 -0.19419131 LPLLPPES(ph)PGPLR ddPTM_A459_MK2206_30min_R1 2 LPLLPPESPGPLR 13 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;A0A669KAX5 A0A0G2JMS7 SCRIB Protein scribble homolog 1 LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR 141.73 0.00081325 58177000 5850.9 5958.7 4627.2 4092.6 6109.9 5931.4 5944 5189.9 5337.8 5610.3 TRUE FALSE 5353.250231 5570.787547 4313.118556 4407.812761 5866.529745 6267.230742 5547.486605 5144.525251 5892.683412 6305.34632 0.849001777 0.883502232 0.6840415 0.699059582 0.930405635 0.993955038 0.879806806 0.81589892 0.93455349 1 12.6223599 -6.280389533 24.63568873 0.917676033 0.779597071 0.4781657 0.074877052 693.05861 900991.7544 0.025239313 0.028669169 5.24E-07 6.280389533 -0.138078963 LPLLPPES(ph)PGPLR ddPTM_A459_MK2206_30min_R2 3 LPLLPPESPGPLR 13 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;A0A669KAX5 A0A0G2JMS7 SCRIB Protein scribble homolog 1 LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR 142.39 0.00077791 27686500 50861.9 39023.4 39657.1 41813.8 35623.6 48200.2 53015 30103.9 46854.5 47205.2 TRUE FALSE 54755.92617 37085.5547 40979.24792 38397.47878 34224.83847 50034.49239 46054.06682 34038.58309 50929.81972 45664.89819 1.199081315 0.812123889 0.897390546 0.840853266 0.749478042 1.09568825 1.008522271 0.745399299 1.115294717 1 15.478798 -6.77150202 24.99627978 0.978039651 0.891508256 0.087250503 0.145564198 599.4586668 1489086.427 0.050616706 0.045158875 1.69E-07 6.77150202 -0.086531396 LPLPDDEHDLS(ph)DR ddPTM_A459_MK2206_30min_R1 4 LPLPDDEHDLSDR 13 0 Q8NF91;Q8NF91-4;A0A0C4DG40;E7ENN3;Q8NF91-2;A0A5F9ZHE1;A0A5F9ZH87;H0Y325;F8WAI0;Q5JV20;Q8NF91-9;H0Y326;Q8NF91-3;Q8NF91-11;Q8NF91-8;A0A5F9ZHB2 Q8NF91 SYNE1 Nesprin-1 1 LPLPDDEHDLS(1)DR;LPLPDDEHDLS(1)DR;LPLPDDEHDLS(1)DR;LPLPDDEHDLS(1)DR 117.07 0.0024395 9105900 2862.71 3056.38 2658.63 2155.03 2800.5 3087.39 4038.11 2682.82 3800.22 4168.16 TRUE FALSE 2619.221482 2857.409106 2478.169603 2321.010784 2688.950155 3262.195354 3768.73505 2659.364388 4195.266468 4684.543129 0.559119942 0.609965375 0.529009881 0.495461504 0.574004781 0.696374281 0.804504291 0.567689167 0.895555095 1 12.19369264 -8.265660148 0.454611478 1.015423709 0.535710395 0.743382722 0.082368498 0.532820847 0.295330216 0.100954381 0.058974871 5.42E-09 8.265660148 -0.479713314 LPLPDDEHDLS(ph)DR ddPTM_A459_MK2206_30min_R2 3 LPLPDDEHDLSDR 13 0 Q8NF91;Q8NF91-4;A0A0C4DG40;E7ENN3;Q8NF91-2;A0A5F9ZHE1;A0A5F9ZH87;H0Y325;F8WAI0;Q5JV20;Q8NF91-9;H0Y326;Q8NF91-3;Q8NF91-11;Q8NF91-8;A0A5F9ZHB2 Q8NF91 SYNE1 Nesprin-1 1 LPLPDDEHDLS(1)DR;LPLPDDEHDLS(1)DR;LPLPDDEHDLS(1)DR 92.427 0.012215 6296100 25294.6 14163.5 18550.6 19867.8 20125.4 17521.9 24414.8 16519.2 17125 18259.8 TRUE FALSE 27231.17402 13460.16119 19169.06775 18244.53719 19335.17567 18188.70818 21209.10743 18678.31616 18614.50155 17663.98422 1.541621283 0.762011617 1.085206344 1.032866479 1.094610108 1.029705867 1.200697825 1.057423734 1.053811038 1 14.10852317 -4.738901263 24.99872037 1.045297189 1.54162328 0.674240929 0.105400971 1142.051384 1266670.246 0.025701983 1.377708387 1.82E-05 4.738901263 0.496326091 LPLPS(ph)PALEYTLGSR ddPTM_A459_MK2206_30min_R1 2 LPLPSPALEYTLGSR 15 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 LPLPS(1)PALEYTLGSR;LPLPS(1)PALEYTLGSR 173.19 3.40E-05 43602000 3305 3833.1 3226.1 2778.6 3202.7 2856.2 2408.97 2232.64 2410.87 2508.44 TRUE FALSE 3023.892395 3583.564493 3007.12132 2992.608253 3075.129677 3017.915576 2248.272007 2213.120264 2661.488564 2819.204485 1.072604847 1.271126132 1.066655979 1.061508049 1.090779223 1.070484809 0.797484545 0.785015871 0.944056587 1 11.46107241 -7.153809442 4.848417529 0.86458946 1.112584205 0.638486718 0.082446175 0.13834095 5.059623947 0.032638749 0.02502669 7.02E-08 7.153809442 0.247994745 LPLPS(ph)PALEYTLGSR ddPTM_A459_MK2206_30min_R2 2 LPLPSPALEYTLGSR 15 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 LPLPS(0.999)PALEYTLGS(0.001)R;LPLPS(1)PALEYTLGSR 119 0.0019592 55939000 27156.4 45341.4 28213.9 36810.5 32917.8 31104.9 42112.6 23281 39646.5 33566.3 TRUE FALSE 29235.51486 43089.81201 29154.53734 33802.9644 31625.28177 32288.61877 36583.16503 26323.90664 43094.88091 32471.03438 0.900356746 1.327023079 0.897862908 1.04101902 0.973953629 0.994382205 1.126639965 0.810688884 1.327179184 1 14.98686572 -10.68793744 14.46477454 0.999911298 1.040261369 0.005939824 0.164642558 0 0 0.145716986 0.03534156 2.05E-11 10.68793744 0.04035007 LPLQES(ph)EEEEREER ddPTM_A459_MK2206_30min_R1 1 LPLQESEEEEREER 14 1 P23497-5;P23497-2;P23497-3;P23497;P23497-4;E9PHV6;P23497-7;P23497-6;C9JBL0 P23497-5 SP100 Nuclear autoantigen Sp-100 1 LPLQES(1)EEEEREER 65.652 0.039275 11145000 928.67 1118.6 1046.5 727.55 1084.6 975.85 1207.8 702.31 1193.8 1158.9 TRUE FALSE 849.6817399 1045.778937 975.4664957 783.5860271 1041.398085 1031.101784 1127.229866 696.1697777 1317.899782 1302.473281 0.652360207 0.802917766 0.748933978 0.601613897 0.799554279 0.791649087 0.865453351 0.534498318 1.011844006 1 10.34703806 -8.292706831 24.52972674 1.005922297 0.733368834 0.573123531 0.096873188 439.0080527 344402.9129 0.09027512 0.023319591 5.10E-09 8.292706831 -0.272553463 LPLQES(ph)EEEEREER ddPTM_A459_MK2206_30min_R2 2 LPLQESEEEEREER 14 1 P23497-5;P23497-2;P23497-3;P23497;P23497-4;E9PHV6;P23497-7;P23497-6;C9JBL0 P23497-5 SP100 Nuclear autoantigen Sp-100 1 LPLQES(1)EEEEREER;LPLQES(1)EEEEREER 105.99 0.014684 34675100 18494.9 19328.2 17328.4 20484 18748.6 17152.2 20713.5 17646.5 14922.2 19547.7 TRUE FALSE 19910.88376 18368.38969 17906.12021 18810.39167 18012.43576 17804.93899 17993.79257 19952.95814 16220.10598 18909.86015 1.052936595 0.971365708 0.946919759 0.994739862 0.952541987 0.941569046 0.951556089 1.055161592 0.857759172 1 14.20685107 -4.764579295 4.788556005 0.963845365 1.059096832 0.240348264 0.047872371 0.256154966 14.35010351 0.011074507 0.082808285 1.72E-05 4.764579295 0.095251467 LPLQLDDAVRPEAEGEEEGR ddPTM_A459_MK2206_30min_R2 3 LPLQLDDAVRPEAEGEEEGR 20 1 P14868;P14868-2;C9J7S3;C9JLC1 P14868 DARS "Aspartate--tRNA ligase, cytoplasmic" 0 ;; 95.205 0.0030119 12268000 7009.7 10669.07 9921.6 13279.4 10035.9 13150.7 14393.3 9598 10907.5 12173 FALSE TRUE 7546.368022 10139.2595 10252.38119 12194.43054 9641.84014 13651.1591 12503.44242 10852.49155 11856.21463 11775.79601 0.64083719 0.861025403 0.870631691 1.035550423 0.818784576 1.159255739 1.061791697 0.921593033 1.006829146 1 13.52353696 -4.13802517 0.722533596 1.008466003 2.47E-17 0.617196267 0.08653679 4.433984667 0.902168079 0.034345062 4.513148553 7.28E-05 4.13802517 -1.008466003 LPLS(ph)PPLVEDSAFEPSR ddPTM_A459_MK2206_30min_R1 3 LPLSPPLVEDSAFEPSR 17 0 O96007 O96007 MOCS2 Molybdopterin synthase catalytic subunit 1 LPLS(1)PPLVEDSAFEPSR;LPLS(1)PPLVEDSAFEPSR;LPLS(1)PPLVEDSAFEPSR 176.17 9.47E-08 24492800 2485.7 2331.66 2143.45 1546.87 2310.57 2090.59 2334.91 1690.54 2337.7 2541.82 TRUE FALSE 2274.278162 2179.86851 1997.958586 1666.010195 2218.535104 2208.957399 2179.152414 1675.759787 2580.712281 2856.719851 0.796115223 0.763066952 0.699389051 0.583189911 0.776602264 0.773249571 0.762816281 0.586602773 0.903383046 1 11.48014385 -8.473099647 5.790327835 0.999543214 0.719925592 0.636636144 0.072520314 0.112012593 8.478690331 0.071483492 0.018541393 3.36E-09 8.473099647 -0.279617622 LPLS(ph)PPLVEDSAFEPSR ddPTM_A459_MK2206_30min_R2 2 LPLSPPLVEDSAFEPSR 17 0 O96007 O96007 MOCS2 Molybdopterin synthase catalytic subunit 1 LPLS(1)PPLVEDSAFEPSR;LPLS(1)PPLVEDSAFEPSR 94.454 0.0067895 9165800 14524.5 12063.2 11261.9 13157.9 10699.8 11208.5 12175.2 10194.1 6994.9 11981.6 TRUE FALSE 15636.50689 11464.15903 11637.36613 12082.85748 10279.67209 11635.04732 10576.58161 11526.50387 7603.303758 11590.64137 1.349063126 0.989087546 1.004031248 1.042466684 0.886894155 1.00383119 0.912510471 0.994466441 0.655986456 1 13.50067278 -1.542663901 0.90431866 0.926044767 199.9999666 0.57988491 0.104514789 633.2519407 1.429752179 0.033594925 260132.5936 0.028663954 1.542663901 199.0739218 LPLS(ph)PPLVEDSAFEPSRK ddPTM_A459_MK2206_30min_R1 2 LPLSPPLVEDSAFEPSRK 18 1 O96007 O96007 MOCS2 Molybdopterin synthase catalytic subunit 1 LPLS(1)PPLVEDSAFEPSRK;LPLS(1)PPLVEDSAFEPSRK 141.64 0.00015819 85016000 7667.6 7611.1 8212.9 6078.5 7699.6 6623.4 7669.8 6853.5 7169.4 6018.4 TRUE FALSE 7015.430356 7115.616007 7655.43123 6546.667123 7392.908628 6998.411184 7158.161636 6793.580572 7914.684786 6764.004829 1.037171104 1.051982692 1.131789735 0.967868488 1.092978023 1.034654966 1.058272698 1.00437252 1.170118145 1 12.72366197 LPLS(ph)PPLVEDSAFEPSRK ddPTM_A459_MK2206_30min_R2 3 LPLSPPLVEDSAFEPSRK 18 1 O96007 O96007 MOCS2 Molybdopterin synthase catalytic subunit 1 LPLS(1)PPLVEDSAFEPSRK;LPLS(1)PPLVEDSAFEPSRK;LPLS(1)PPLVEDSAFEPSRK 119.92 0.00049523 37949300 99505 140217 115561 124946 121939 127061 114403 94008 101048 111619 TRUE FALSE 107123.1793 133254.0277 119413.7461 114737.5121 117151.0622 131896.3954 99381.74868 106295.1684 109836.9724 107976.8812 0.992093661 1.234097765 1.105919571 1.062611838 1.084964308 1.221524404 0.9203984 0.984425251 1.017226754 1 16.72036293 -7.273128179 24.99325582 0.979214706 1.117783098 0.472949991 0.0705084 661.9263295 1415340.141 0.028609549 0.019468246 5.33E-08 7.273128179 0.138568393 LPLVPES(ph)PR ddPTM_A459_MK2206_30min_R1 4 LPLVPESPR 9 0 C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR 144.17 0.0019696 64658000 5290.1 5305.6 5973.03 4023.91 6107.7 5658.19 5601 5506.8 5123.43 5272.3 TRUE FALSE 4840.149216 4960.204476 5567.597365 4333.832245 5864.417376 5978.551828 5227.36751 5458.654628 5656.028883 5925.472328 0.816837705 0.837098581 0.939603977 0.731390175 0.989696188 1.008957851 0.882185794 0.921218483 0.954527938 1 12.53271444 -6.287271246 24.99897604 0.954106049 0.839392396 0.528094804 0.059039609 676.37623 654565.8701 0.018374358 0.020841722 5.16E-07 6.287271246 -0.114713654 LPLVPES(ph)PR ddPTM_A459_MK2206_30min_R2 5 LPLVPESPR 9 0 C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR 139.32 0.0023898 46888900 46674.7 51264.3 46187.4 52359.6 53662.1 53047.5 57964.4 37857.2 40805.3 49508.1 TRUE FALSE 50248.15092 48718.58941 47727.26486 48081.65319 51555.05632 55066.25978 50353.60465 42805.26602 44354.47123 47892.65475 1.049182827 1.017245539 0.996546654 1.003946293 1.076471049 1.149785078 1.051384704 0.893775178 0.926122627 1 15.54751679 -7.750211566 24.99780247 0.93246168 1.049141598 0.521942363 0.047755109 169.2759708 376881.0716 0.025079078 0.01431151 1.78E-08 7.750211566 0.116679918 LPLVPES(ph)PRR ddPTM_A459_MK2206_30min_R1 5 LPLVPESPRR 10 1 C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR 139.19 0.00079801 258187000 20399.1 20425.8 19067 16793.6 19947.5 18226.6 19007.4 17518.5 15195.5 13317.2 TRUE FALSE 18664.04943 19096.07671 17772.78516 18087.04598 19152.94884 19258.57434 17739.45103 17365.3376 16775.1266 14967.03528 1.247010452 1.275875707 1.187461968 1.208458833 1.279675532 1.286732742 1.185234798 1.160238971 1.120804908 1 13.86950086 -8.371554736 0.948477098 1.003404079 1.24518031 0.843696143 0.033054463 0.215173179 0.420914734 0.03411385 0.011863225 4.25E-09 8.371554736 0.241776231 LPLVPES(ph)PRR ddPTM_A459_MK2206_30min_R2 5 LPLVPESPRR 10 1 C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR 138.2 0.00085342 200479000 192768 241567 196219 232243 239868 240755 221519 169581 187964 203157 TRUE FALSE 207526.4663 229571.1341 202760.8435 213268.004 230449.5771 249917.1002 192433.2892 191745.819 204312.769 196528.0037 1.055963844 1.168134463 1.031714767 1.085178702 1.172604274 1.271661521 0.979164727 0.97566665 1.039611481 1 17.58437537 -7.330030229 24.99999855 0.996582693 1.127883277 0.492798234 0.065681708 162.6625736 59286.3976 0.028876172 0.019468313 4.68E-08 7.330030229 0.131300584 LPNGEPS(ph)PDPGGK ddPTM_A459_MK2206_30min_R2 1 LPNGEPSPDPGGK 13 0 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 LPNGEPS(1)PDPGGK 83.856 0.030186 6783000 65090 64409 58765 56627 56735 49474 66220 59827 48145 59628 TRUE FALSE 70073.34045 61210.54272 60724.19577 52000.39296 54507.29883 51356.76774 57525.23446 67646.59432 52332.56507 57682.34324 1.214814387 1.061166022 1.052734552 0.901495848 0.94495639 0.890337751 0.997276311 1.172743521 0.907254493 1 15.81584215 -4.728121076 1.439621521 0.979814677 1.326692056 0.452643053 0.078936346 1.343097266 2.328466764 0.023975031 0.700430601 1.87E-05 4.728121076 0.346877378 LPNGLGGPNGFPKPT(ph)PEEGPPELNRQSPNSSSAAASVASR ddPTM_A459_MK2206_30min_R1 1 LPNGLGGPNGFPKPTPEEGPPELNRQSPNSSSAAASVASR 40 2 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 LPNGLGGPNGFPKPT(0.488)PEEGPPELNRQS(0.488)PNS(0.012)S(0.005)S(0.005)AAAS(0.002)VAS(0.001)R 48.27 0.0065761 38182000 578.18 667.19 716.11 493.59 639.73 605 768.3 566.67 607.52 535.9 TRUE FALSE 529.0027549 623.7558097 667.5024484 531.6063873 614.2481994 639.2545772 717.0481088 561.7156639 670.673878 602.2913378 0.878317056 1.035638022 1.108271706 0.882639935 1.019852289 1.061371029 1.190533657 0.932631151 1.113537313 1 9.2343177 -6.599494129 4.77449885 1.062806729 0.985705736 0.157787549 0.089213746 0.430420621 18.14244703 0.029745159 0.029861413 2.51E-07 6.599494129 -0.077100993 LPNGLGGPNGFPKPTPEEGPPELNRQS(ph)PNSSSAAASVASR ddPTM_A459_MK2206_30min_R1 1 LPNGLGGPNGFPKPTPEEGPPELNRQSPNSSSAAASVASR 40 2 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 LPNGLGGPNGFPKPT(0.082)PEEGPPELNRQS(0.819)PNS(0.054)S(0.025)S(0.014)AAAS(0.005)VAS(0.002)R 61.953 1.03E-05 41376000 1212.7 1205.6 1339.1 905.52 1766.3 1044.4 1256.4 1326.1 944.06 1075.5 TRUE FALSE 1109.553497 1127.115221 1248.205623 975.2633073 1695.944531 1103.533025 1172.587848 1314.506048 1042.198415 1208.74106 0.91794143 0.932470368 1.032649311 0.80684221 1.403066866 0.912960652 0.970090194 1.08750012 0.862218096 1 10.2392895 LPNGLGGPNGFPKPTPEEGPPELNRQS(ph)PNSSSAAASVASR ddPTM_A459_MK2206_30min_R2 1 LPNGLGGPNGFPKPTPEEGPPELNRQSPNSSSAAASVASR 40 2 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 LPNGLGGPNGFPKPT(0.016)PEEGPPELNRQS(0.473)PNS(0.088)S(0.088)S(0.096)AAAS(0.114)VAS(0.125)R 43.444 0.0048087 30657000 6743.5 10248 5630.7 10141 9764.7 11134 9194.3 6653.8 8632.8 6718.8 TRUE FALSE 7259.787545 9739.099222 5818.424728 9312.447861 9381.288814 11557.71217 7987.077366 7523.474506 9383.665339 6499.566106 1.116964952 1.498422981 0.895202023 1.432779928 1.443371551 1.778228267 1.228863163 1.157534885 1.443737195 1 12.6661277 -10.99106447 3.136671655 0.992833305 1.335874048 0.155694811 0.232389661 52339041.9 60030571.59 3253684.441 0.058035178 1.02E-11 10.99106447 0.343040743 LPNLSS(ph)PSAEGPPGPPSGPAPR ddPTM_A459_MK2206_30min_R2 1 LPNLSSPSAEGPPGPPSGPAPR 22 0 O60784-3;O60784-4;O60784;O60784-2 O60784-3 TOM1 Target of Myb protein 1 1 LPNLS(0.194)S(0.794)PS(0.012)AEGPPGPPSGPAPR 123.6 3.23E-05 4401600 9197.8 7449.8 7810.1 11200 4858.8 7903.2 7488 5865.9 3863.1 8246.6 TRUE FALSE 9901.99064 7079.853765 8070.484836 10284.92417 4668.019098 8203.961814 6504.816605 6632.593271 4199.105455 7977.514117 1.24123762 0.887476181 1.011654096 1.289239232 0.585147081 1.028385747 0.815393932 0.831411035 0.526367662 1 12.96172354 -6.259937092 24.99960117 0.801765357 1.084853684 0.412212056 0.180286234 149.3910978 2486019.983 0.053190857 0.065001024 5.50E-07 6.259937092 0.283088326 LPNLSSPS(ph)AEGPPGPPSGPAPR ddPTM_A459_MK2206_30min_R2 1 LPNLSSPSAEGPPGPPSGPAPR 22 0 O60784-3;O60784-4;O60784;O60784-2 O60784-3 TOM1 Target of Myb protein 1 1 LPNLS(0.007)S(0.366)PS(0.627)AEGPPGPPSGPAPR 139 1.10E-05 3178400 12034 9814.6 8787.8 8231.5 7775.3 5788.3 8747.3 8206.9 8336.1 7151.2 TRUE FALSE 12955.33229 9327.221236 9080.780866 7558.960119 7470.002654 6008.577813 7598.769003 9279.570009 9061.15891 6917.85693 1.872737818 1.348281893 1.31265809 1.09267367 1.079814563 0.868560578 1.098428181 1.341393744 1.309821669 1 12.75610946 -4.163944071 1.047548895 1.119461905 3.649237919 0.733945112 0.135973043 3.202336381 1.151025657 0.047428274 12.36361772 6.86E-05 4.163944071 2.529776014 LPNS(ph)IASR ddPTM_A459_MK2206_30min_R1 2 LPNSIASR 8 0 Q9ULT0;Q9ULT0-4;H7C055;G5E9G4 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 LPNS(0.999)IAS(0.001)R;LPNS(0.995)IAS(0.005)R 118.23 0.0084692 18966300 3721.7 3922.4 3572.9 3149.7 3397 3303.9 3278.9 3286.3 2855.4 2837.7 TRUE FALSE 3405.149872 3667.051047 3330.381503 3392.29044 3261.690297 3490.963963 3060.170564 3257.568226 3152.229048 3189.2557 1.067694218 1.149814061 1.044250388 1.063662108 1.02271207 1.094601466 0.959524996 1.021419583 0.98839019 1 11.63900406 -6.281910928 0.513334681 0.990385861 1.11589378 0.4978372 0.037332808 1.0043876 0.522101669 0.029514904 0.06313164 5.23E-07 6.281910928 0.12550792 LPNS(ph)IASR ddPTM_A459_MK2206_30min_R2 2 LPNSIASR 8 0 Q9ULT0;Q9ULT0-4;H7C055;G5E9G4 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 LPNS(0.991)IAS(0.009)R;LPNS(0.997)IAS(0.003)R 91.469 0.026822 10916000 60496 52985 61871 38758 37522 41008 66787 56402 25929 46640 TRUE FALSE 65127.62027 50353.84195 63933.74826 35591.34742 36048.69775 42568.58818 58017.78667 63773.93506 28184.25755 45118.14062 1.443490786 1.116044262 1.417029766 0.788847832 0.79898456 0.943491633 1.285908193 1.413487661 0.624676841 1 15.46141999 -5.749700532 24.99407317 1.000335911 1.304573889 0.310390593 0.234383118 326.3130688 694771.5945 0.066860174 0.114607145 1.78E-06 5.749700532 0.304237978 LPNSIAS(ph)R ddPTM_A459_MK2206_30min_R2 2 LPNSIASR 8 0 Q9ULT0;Q9ULT0-4;H7C055;G5E9G4 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 LPNS(0.105)IAS(0.895)R;LPNS(0.061)IAS(0.939)R 95.483 0.021851 16416700 52036 50172 42785 49071 53690 44468 57551 42923 33860 41933 TRUE FALSE 56019.91617 47680.53144 44211.43055 45061.74233 51581.86083 46160.2609 49994.48457 48533.18348 36805.0816 40564.72964 1.381000605 1.175418445 1.089898316 1.110860167 1.271593852 1.1379408 1.23246192 1.196437987 0.907317315 1 15.30793825 -1.544282993 0.023963898 2.47E-07 2.706059754 0.366935651 0.102027617 2723.681397 5.057262208 199.8405499 404.2436482 0.028557291 1.544282993 2.706059507 LPNTYPNSS(ph)SPGPGGLGGSVHYATMAR ddPTM_A459_MK2206_30min_R1 2 LPNTYPNSSSPGPGGLGGSVHYATMAR 27 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 LPNT(0.003)Y(0.019)PNS(0.178)S(0.673)S(0.127)PGPGGLGGSVHYATMAR;LPNT(0.009)Y(0.01)PNS(0.296)S(0.389)S(0.296)PGPGGLGGSVHYATMAR 95.652 1.70E-06 56098000 3673.2 2011.27 2707.08 1978.53 4427.5 4867.7 4270.6 3133 2001.77 1931.78 TRUE FALSE 3360.775051 1880.335957 2523.330952 2130.916723 4251.1433 5143.304967 3985.716066 3105.608511 2209.861155 2171.103491 1.547957095 0.866073849 1.162234303 0.981490165 1.958056499 2.368981944 1.83580197 1.430428593 1.017851597 1 11.08421278 -6.252089331 24.91676367 1.673428719 1.121541009 0.210756687 0.424484801 919.603102 2450631.279 0.133095163 0.169501894 5.60E-07 6.252089331 -0.55188771 LPNTYPNSSS(ph)PGPGGLGGSVHYATMAR ddPTM_A459_MK2206_30min_R1 1 LPNTYPNSSSPGPGGLGGSVHYATMAR 27 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 LPNTYPNSS(0.063)S(0.937)PGPGGLGGSVHYATMAR 152.71 2.07E-14 48599000 1322.4 571.99 956.38 635.07 2014.4 2133.4 2070.7 1368.4 869.28 585.79 TRUE FALSE 1209.922936 534.753347 891.4635902 683.9832014 1934.162182 2254.191264 1932.567381 1356.436223 959.6447667 658.3620877 1.837777354 0.812248088 1.354062767 1.038916448 2.937839555 3.423938447 2.935417177 2.060319463 1.457624588 1 9.362737449 -6.252641341 24.88042835 2.443254644 1.235380286 0.321354425 0.724173734 664.0501847 1877900.597 0.222462797 0.282714296 5.59E-07 6.252641341 -1.207874357 LPNTYPNSSS(ph)PGPGGLGGSVHYATMAR ddPTM_A459_MK2206_30min_R2 3 LPNTYPNSSSPGPGGLGGSVHYATMAR 27 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 LPNTYPNS(0.002)S(0.276)S(0.722)PGPGGLGGSVHYATMAR;LPNTYPNS(0.013)S(0.062)S(0.924)PGPGGLGGSVHYATMAR;LPNT(0.006)Y(0.002)PNS(0.064)S(0.134)S(0.793)PGPGGLGGSVHYATMAR 152.71 2.07E-14 48562300 40796.3 81016.5 63752.6 120152.3 113015.5 151698 109363.6 79122.7 109511.3 62893.3 TRUE FALSE 43919.6961 76993.33842 65878.07986 110335.4727 108577.9436 157470.9737 95004.02795 89464.30856 119036.3949 60841.09677 0.721875483 1.265482421 1.082789157 1.813502363 1.784615159 2.588233645 1.561510771 1.470458511 1.95651297 1 15.89275854 -5.749415111 7.055454124 1.789561674 1.043454679 0.398339912 0.399686495 0.142117129 33.99875817 0.109612567 0.181362241 1.78E-06 5.749415111 -0.746106995 LPPKVESLESLYFT(ph)PIPAR ddPTM_A459_MK2206_30min_R1 1 LPPKVESLESLYFTPIPAR 19 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 LPPKVESLESLYFT(0.999)PIPAR 97.662 0.00211 6719700 1153.9 1195.7 1160.5 988.99 1054.2 953.83 799.37 1316.4 972.98 730.08 TRUE FALSE 1055.754746 1117.859713 1081.728493 1065.162181 1012.208982 1007.83503 746.0454858 1304.890854 1074.124753 820.5278222 1.286677571 1.362366616 1.318332498 1.298142674 1.233607142 1.228276486 0.909226312 1.590306652 1.309065608 1 9.680408443 -6.160296552 2.619143392 1.225904487 1.32557274 0.079960977 0.171448715 0.946490021 12.66746252 0.055912567 0.075638504 6.91E-07 6.160296552 0.099668253 LPPPPPQAPPEEENES(ph)EPEEPSGVEGAAFQSR ddPTM_A459_MK2206_30min_R1 1 LPPPPPQAPPEEENESEPEEPSGVEGAAFQSR 32 0 R4GMQ1;O60341 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 1 LPPPPPQAPPEEENES(1)EPEEPSGVEGAAFQSR 81.847 3.38E-06 2690000 53.215 0 0 0 0 165.24 164.58 0 128.2 0 TRUE FALSE 48.68878481 0 0 0 0 174.595746 153.6011685 0 141.5268488 0 0 LPPPPPQAPPEEENES(ph)EPEEPSGVEGAAFQSR ddPTM_A459_MK2206_30min_R2 1 LPPPPPQAPPEEENESEPEEPSGVEGAAFQSR 32 0 R4GMQ1;O60341 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 1 LPPPPPQAPPEEENES(0.996)EPEEPS(0.004)GVEGAAFQSR 49.98 0.030152 0 1359.2 4236.7 3330.5 1533.3 4208.1 4056.2 3987.4 3149.1 3766 3443.5 TRUE FALSE 1463.261397 4026.311639 3441.537208 1408.024485 4042.86885 4210.561533 3463.84959 3560.698182 4093.559873 3331.138877 0.439267605 1.208689216 1.033141317 0.422685615 1.213659652 1.264000598 1.039839442 1.06891316 1.228876977 1 11.70179979 LPPQS(ph)SGVDTSPCPNSPVFR ddPTM_A459_MK2206_30min_R2 1 LPPQSSGVDTSPCPNSPVFR 20 0 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 LPPQS(0.797)S(0.008)GVDT(0.018)S(0.01)PCPNS(0.167)PVFR 179.59 2.91E-13 6180900 1101.7 2282.2 2758.3 1308.3 1068 1656.9 2536.6 2301.4 1758.9 1412 TRUE FALSE 1186.046999 2168.869267 2850.260345 1201.407705 1026.064954 1719.954491 2203.541373 2602.200882 1911.885943 1365.926556 0.868309496 1.587837397 2.086686384 0.879555127 0.751186035 1.259185191 1.613220977 1.905081112 1.399698933 1 10.4156642 -7.252987013 21.78217455 1.55492366 1.254706453 0.059794905 0.424829927 285.5347104 735840.5373 0.175100139 0.132849625 5.58E-08 7.252987013 -0.300217207 LPPQSCLLLPPT(ph)PVR ddPTM_A459_MK2206_30min_R2 1 LPPQSCLLLPPTPVR 15 0 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 LPPQS(0.002)CLLLPPT(0.998)PVR 110.77 0.0079963 5188900 7661.9 9124.6 6251.3 7779.4 7929.4 7206.1 8027.2 5644.1 5659 6332.2 TRUE FALSE 8248.500955 8671.485632 6459.715222 7143.798135 7618.051914 7480.333185 6973.218998 6381.803249 6151.209591 6125.580833 1.346566339 1.415618513 1.054547381 1.166223797 1.243645643 1.221163085 1.138376782 1.041828265 1.00418389 1 12.58063093 -1.522878745 0.16601457 0.955651516 2.593722231 0.613994011 0.084790496 45.21128569 0.481070471 0.252401365 18.27491369 0.03 1.522878745 1.638070714 LPPQSSGVDTSPCPNS(ph)PVFR ddPTM_A459_MK2206_30min_R1 1 LPPQSSGVDTSPCPNSPVFR 20 0 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 LPPQS(0.017)S(0.058)GVDT(0.367)S(0.115)PCPNS(0.442)PVFR 116.45 0.0010537 0 209.49 63.536 167.82 173.28 142.22 161.4 324.67 351.72 187.8 60.337 TRUE FALSE 191.6717754 59.39979485 156.428846 186.6260556 136.5550762 170.5383285 303.0118567 348.6449491 207.322482 67.81200308 2.82651694 0.875948094 2.306801729 2.752109467 2.013730166 2.514869356 4.468410354 5.14134568 3.057312461 1 6.083468755 -7.098902346 5.362337024 3.753038302 2.137032677 0.192876973 1.140319579 0.281131918 12.17349424 0.426815732 0.330510366 7.96E-08 7.098902346 -1.616005625 LPPQSSGVDTSPCPNS(ph)PVFR ddPTM_A459_MK2206_30min_R2 1 LPPQSSGVDTSPCPNSPVFR 20 0 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 LPPQS(0.002)SGVDT(0.068)S(0.068)PCPNS(0.861)PVFR 173.45 7.38E-10 5386700 694.61 3225.7 2738.9 3469.2 3504 2373.3 3283.6 540.09 2626.1 2410.8 TRUE FALSE 747.7898757 3065.516429 2830.213559 3185.755263 3366.415354 2463.617595 2852.459376 610.6816174 2854.513431 2332.135793 0.320645941 1.314467381 1.213571511 1.366024771 1.443490282 1.056378278 1.223110328 0.261855085 1.22399109 1 11.18743608 LPQQDHTTTTDS(ph)EMEEPYLQESK ddPTM_A459_MK2206_30min_R2 1 LPQQDHTTTTDSEMEEPYLQESK 23 0 B3KPJ4;A0A0A0MSI2;Q8IXK0-3;Q8IXK0-2;Q8IXK0-4;Q8IXK0;Q8IXK0-5 B3KPJ4 PHC2 Polyhomeotic-like protein 2 1 LPQQDHT(0.002)T(0.015)T(0.079)T(0.079)DS(0.824)EMEEPYLQESK 117.38 7.12E-06 5886000 22974 20188 25749 26032 20973 24467 26832 21101 16034 25108 TRUE FALSE 24732.9071 19185.49328 26607.45881 23905.10233 20149.49464 25398.10883 23308.92617 23858.97315 17428.60834 24288.72802 1.018287458 0.789892878 1.095465304 0.984205608 0.829582127 1.045674718 0.959660224 0.982306407 0.717559533 1 14.56799932 LPQSSSSESSPPS(ph)PQPTK ddPTM_A459_MK2206_30min_R2 2 LPQSSSSESSPPSPQPTK 18 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 LPQSSSSES(0.001)S(0.008)PPS(0.992)PQPTK;LPQSSSSES(0.001)S(0.019)PPS(0.98)PQPTK 246.1 4.01E-79 0 17042.1 20769.5 15183 20273 15387.5 17748.3 25169.1 25151.8 17218.5 24096.7 TRUE FALSE 18346.85628 19738.11683 15689.19364 18616.63105 14783.30943 18423.72399 21864.36694 28439.22662 18716.13401 23310.42665 0.787066515 0.84675056 0.673054761 0.798639653 0.634193001 0.790364083 0.937965112 1.220021711 0.802908256 1 14.50868779 -7.312773427 3.556996635 1.017896262 0.749929201 0.524896573 0.110587945 0.176787143 4.57580547 0.046670136 0.031075283 4.87E-08 7.312773427 -0.267967061 LPRLS(ph)CEPVMEEK ddPTM_A459_MK2206_30min_R2 1 LPRLSCEPVMEEK 13 1 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 LPRLS(1)CEPVMEEK 80.459 0.020364 1737300 8931.4 16684 14877 13579 16819 12595 12371 9597.1 11370 10050 TRUE FALSE 9615.194851 15855.49682 15372.99175 12469.55226 16158.60155 13074.31155 10746.67284 10851.47392 12358.94205 9722.069323 0.989007024 1.63087675 1.581246877 1.28260269 1.662053727 1.34480748 1.105389448 1.116169157 1.27122546 1 13.24704771 -7.129234415 4.275401384 1.134210707 1.445515967 0.355829936 0.19348479 0.256272135 7.691866137 0.074150319 0.056844574 7.43E-08 7.129234415 0.31130526 LPS(ph)DSER ddPTM_A459_MK2206_30min_R1 1 LPSDSER 7 0 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 LPS(1)DSER 112.41 0.014575 10276000 2021.9 2116.6 1979.5 1914.5 1679 1919.9 2347.7 1692.2 1856.9 2161.2 TRUE FALSE 1849.926788 1978.808955 1845.137055 2061.955122 1612.121875 2028.603079 2191.089217 1677.405274 2049.9314 2428.945772 0.761617163 0.814678112 0.759645224 0.848909492 0.663712584 0.835178414 0.90207416 0.690589841 0.843959311 1 11.24611457 -14.52287875 0.336779364 3.219301316 0.783108498 0.453979528 0.069473164 346.7532871 2.947867925 552.3962993 0.055165198 3.00E-15 14.52287875 -2.436192817 LPS(ph)DSER ddPTM_A459_MK2206_30min_R2 2 LPSDSER 7 0 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 LPS(0.924)DS(0.076)ER;LPS(0.992)DS(0.008)ER 112.11 0.014704 33850000 76979 89258 80621 88465 76232 75709 82299 76905 55099 87056 TRUE FALSE 82872.57143 84825.57751 83308.8639 81237.12651 73238.74864 78590.15905 71493.04244 86956.74755 59891.41142 84215.36985 0.984055186 1.007245799 0.989235861 0.964635394 0.86966012 0.933204464 0.848931051 1.032551988 0.711169606 1 16.36179594 -6.071573748 3.997227619 0.900253553 0.993285321 0.215131483 0.082614302 0.346531533 10.6250277 0.022988544 0.031240304 8.48E-07 6.071573748 0.093031768 LPS(ph)GSGAAS(ph)PTGSAVDIR ddPTM_A459_MK2206_30min_R1 2 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 LPS(0.997)GS(0.005)GAAS(0.953)PT(0.045)GSAVDIR;LPS(0.824)GS(0.176)GAAS(0.968)PT(0.032)GS(0.001)AVDIR 157.73 0.00036568 28313700 5303.61 5436.8 5262.6 4742.63 5397.5 4909.19 5166.7 4543.56 4109.63 3663.79 TRUE FALSE 4852.510119 5082.863332 4905.389374 5107.908184 5182.506146 5187.144095 4822.03887 4503.836134 4536.840745 4117.687965 1.178455036 1.234397403 1.191297013 1.240479664 1.258596132 1.25972248 1.171054949 1.093777909 1.101793235 1 12.00761879 -7.972612581 1.21183929 1.023241997 1.228401946 0.839710937 0.032232052 0.180264888 0.478353695 0.030378877 0.010661561 1.07E-08 7.972612581 0.205159948 LPS(ph)GSGAAS(ph)PTGSAVDIR ddPTM_A459_MK2206_30min_R2 1 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 LPS(0.944)GS(0.057)GAAS(0.992)PT(0.005)GS(0.001)AVDIR 112.74 0.0221 3041700 10487 13421 9844.4 12579 12207 12365 13969 10648 9673.1 10940 TRUE FALSE 11289.89278 12754.53266 10172.60738 11551.25546 11727.69184 12835.55874 12134.85352 12039.73016 10514.44875 10583.0287 1.06679223 1.205187383 0.961218917 1.091488627 1.108160261 1.212843611 1.146633338 1.137645045 0.993519819 1 13.36946494 -8.266510411 24.66732857 0.996759881 1.117181347 0.332672689 0.067681866 449.5417819 2186689.57 0.060388635 0.017441623 5.41E-09 8.266510411 0.120421466 LPS(ph)GSGAASPTGSAVDIR ddPTM_A459_MK2206_30min_R1 1 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LPS(0.937)GS(0.057)GAAS(0.006)PTGSAVDIR 237.34 7.31E-25 169890000 137.75 201.27 0 0 51.428 0 139.58 141.13 0 0 TRUE FALSE 126.0336391 188.1672864 0 0 49.37951386 0 130.2688729 139.8961153 0 0 0 LPS(ph)GSGAASPTGSAVDIR ddPTM_A459_MK2206_30min_R2 4 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LPS(0.975)GS(0.025)GAASPTGSAVDIR;LPS(0.948)GS(0.052)GAASPTGSAVDIR;LPS(0.997)GS(0.003)GAASPTGSAVDIR;LPS(0.979)GS(0.021)GAASPTGSAVDIR 245.67 5.09E-26 482903000 190221 175782 199959 178442 117495 115205 112837 85879 123971 190440 TRUE FALSE 204784.466 167052.9215 206625.5333 163862.7178 112881.5559 119589.207 98021.36636 97103.68017 134753.7735 184225.9584 1.111593978 0.906782752 1.121587506 0.889465954 0.612734258 0.649144171 0.532071415 0.527090107 0.731459207 1 17.49111683 -6.094115808 3.470377068 0.643627757 1.031658291 0.586058108 0.139190132 0.155730417 3.520144567 0.040263369 0.054943151 8.05E-07 6.094115808 0.388030534 LPS(ph)IVVEPTEGEVESGELR ddPTM_A459_MK2206_30min_R1 4 LPSIVVEPTEGEVESGELR 19 0 B5MBX5;B5MCP4;Q53QV2 B5MBX5 LBH Protein LBH 1 LPS(1)IVVEPTEGEVESGELR;LPS(0.999)IVVEPT(0.001)EGEVESGELR;LPS(0.994)IVVEPT(0.006)EGEVESGELR;LPS(0.819)IVVEPT(0.181)EGEVESGELR 217.35 4.48E-19 27638100 1623.47 1348.55 1431.15 1096.74 1076.9 840.73 1258.91 824.02 942.41 903.01 TRUE FALSE 1485.385351 1260.75915 1334.007525 1181.211105 1034.004793 888.3314061 1174.930411 816.81568 1040.376892 1014.881696 1.463604435 1.242272035 1.314446334 1.163890441 1.018842685 0.875305377 1.157701844 0.804838321 1.025121348 1 9.987095848 -5.979885409 1.453640178 0.966005301 1.357751825 0.725695583 0.100089832 0.208315017 0.89226045 0.033450324 0.060443022 1.05E-06 5.979885409 0.391746524 LPS(ph)IVVEPTEGEVESGELR ddPTM_A459_MK2206_30min_R2 2 LPSIVVEPTEGEVESGELR 19 0 B5MBX5;B5MCP4;Q53QV2 B5MBX5 LBH Protein LBH 1 LPS(1)IVVEPTEGEVESGELR;LPS(1)IVVEPTEGEVESGELR 110.56 0.00065032 7964200 14950 17450.3 12654.2 17596.2 17964 14106 15934.7 11485 11455 14230 TRUE FALSE 16094.58349 16583.74348 13076.08471 16158.53417 17258.6431 14642.81371 13842.45475 12986.12893 12451.33519 13765.67627 1.169182188 1.204716947 0.949905 1.17382785 1.253744659 1.063719169 1.005577531 0.943370212 0.904520414 1 13.74878787 -7.241787226 2.393417659 0.948633571 1.143418771 0.551529125 0.079056352 0.244314521 2.750492339 0.03883388 0.026009484 5.73E-08 7.241787226 0.1947852 LPS(ph)LGNKEPPGQEK ddPTM_A459_MK2206_30min_R2 1 LPSLGNKEPPGQEK 14 1 Q9UPY5 Q9UPY5 SLC7A11 Cystine/glutamate transporter 1 LPS(1)LGNKEPPGQEK 71.143 0.030572 13513000 180530 97430 99318 74264 53385 80087 160390 69214 149890 127810 TRUE FALSE 194351.5156 92591.76788 102629.2125 68196.39364 51288.83666 83134.7669 139330.6003 78260.50745 162927.1613 123639.5702 1.57192002 0.748884582 0.830067691 0.551574173 0.41482542 0.672396117 1.126909453 0.632972982 1.31775904 1 16.91578102 -8.262206197 24.99995891 1.158879525 0.799776958 0.152762023 0.317970968 127.0735616 4142483.55 0.257373289 0.081463003 5.47E-09 8.262206197 -0.359102567 LPS(ph)PATPAGQGEQSAAR ddPTM_A459_MK2206_30min_R1 3 LPSPATPAGQGEQSAAR 17 0 H0YC56 H0YC56 MGAT4B 1 LPS(0.5)PAT(0.5)PAGQGEQSAAR;LPS(0.5)PAT(0.5)PAGQGEQSAAR;LPS(0.5)PAT(0.5)PAGQGEQSAAR 97.223 0.0056775 21912100 6161.2 6032 3757.5 4214.7 6390.8 5958.7 6924.6 7061.3 7294.1 6907.1 TRUE FALSE 5637.157586 5639.315704 3502.451369 4539.316924 6136.240903 6296.076445 6462.672569 6999.563799 8052.347797 7762.803694 0.726175466 0.726453473 0.451183813 0.58475225 0.790467097 0.811057022 0.832517841 0.901679867 1.037298908 1 12.92236209 -7.192123897 0.84104108 1.004397302 0.62297235 0.737586819 0.086459846 0.352094324 0.494121134 0.073925883 0.04642788 6.43E-08 7.192123897 -0.381424952 LPS(ph)PDVR ddPTM_A459_MK2206_30min_R2 2 LPSPDVR 7 0 Q9H425-2;Q9H425-3;Q9H425;E5RFY9 Q9H425-2 C1orf198 Uncharacterized protein C1orf198 1 LPS(1)PDVR;LPS(1)PDVR 96.034 0.023406 9427600 53006 47147 46014 46468 40498 39816 50230 36662 30331 52651 TRUE FALSE 57064.18011 44805.74854 47548.08379 42671.41576 38907.84503 41331.22578 43634.74066 41453.84928 32969.13555 50933.00218 1.120377313 0.879699735 0.933541746 0.837795023 0.763902448 0.811482222 0.856708594 0.813889767 0.64730399 1 15.63631314 -1.522878745 0.732589529 0.809592817 47.68884931 0.495505313 0.087635901 271.6398594 1.261650782 0.03186725 20965.37794 0.03 1.522878745 46.87925649 LPS(ph)PGLHGQR ddPTM_A459_MK2206_30min_R1 2 LPSPGLHGQR 10 0 P10070;P10070-3;P10070-1;P10070-4;P10070-2 P10070;P10070-4 GLI2 Zinc finger protein GLI2 1 LPS(1)PGLHGQR;LPS(1)PGLHGQR 104.59 0.0065349 0 2876.8 3052.4 2789.1 2400.6 2657.4 2238.3 2337.55 2320.71 1858.24 1869.29 TRUE FALSE 2632.113053 2853.688205 2599.783663 2585.494628 2551.550131 2365.030612 2181.616305 2300.420277 2051.410698 2100.871758 1.252867075 1.35833527 1.237478515 1.230677036 1.214519697 1.125737734 1.03843383 1.094983675 0.976456888 1 11.03677238 -6.822061593 0.675044936 0.996294142 1.308255509 0.894865597 0.038488501 0.212840176 0.211016275 0.028690989 0.028156606 1.51E-07 6.822061593 0.311961368 LPS(ph)PGLHGQR ddPTM_A459_MK2206_30min_R2 2 LPSPGLHGQR 10 0 P10070;P10070-3;P10070-1;P10070-4;P10070-2 P10070;P10070-4 GLI2 Zinc finger protein GLI2 1 LPS(1)PGLHGQR;LPS(1)PGLHGQR 96.82 0.014083 20355000 46563 46662 48735 53038 51342 50305 48578 38685 43669 44756 TRUE FALSE 50127.89908 44344.83293 50359.80058 48704.62574 49326.05511 52219.39203 42199.65025 43741.26233 47467.25068 43295.61539 1.157805441 1.024233806 1.163161676 1.124932059 1.139285229 1.206112711 0.974686464 1.010293119 1.096352373 1 15.40193331 -7.270393362 24.99677009 1.021190749 1.131736616 0.539858943 0.052190796 555.0755368 1549592.87 0.021828146 0.014953485 5.37E-08 7.270393362 0.110545867 LPS(ph)PTPENK ddPTM_A459_MK2206_30min_R2 2 LPSPTPENK 9 0 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 LPS(0.97)PT(0.03)PENK;LPS(0.972)PT(0.028)PENK 117.02 0.0076638 24198800 212911 193975 194205 177872 145429 129760 184338 139487 125826 175592 TRUE FALSE 229211.6299 184342.4836 200679.6978 163339.2886 139718.7267 134698.1077 160134.1992 157718.4298 136770.118 169862.4474 1.349395545 1.085245658 1.18142474 0.961597405 0.822540408 0.792983439 0.94272867 0.928506755 0.805181605 1 17.37400742 -5.819049804 2.680121495 0.876546036 1.205083892 0.741659383 0.085463322 0.134527094 1.96487231 0.02489214 0.042702976 1.52E-06 5.819049804 0.328537855 LPS(ph)PTSPFSSLSQDQAATSK ddPTM_A459_MK2206_30min_R2 1 LPSPTSPFSSLSQDQAATSK 20 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;H0YDG6;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 LPS(0.655)PT(0.039)S(0.306)PFSSLSQDQAATSK 202.61 6.49E-16 21766000 41498 30182 32017 34138 28756 21338 37578 26817 22691 34509 TRUE FALSE 44675.11879 28683.20577 33084.4308 31348.8162 27626.89495 22150.03254 32643.96346 30322.07398 24664.62216 33382.97416 1.338260593 0.859216606 0.991057017 0.939066006 0.827574404 0.663512857 0.977862647 0.908309542 0.738838369 1 15.02682487 -2.763702857 1.493435253 0.867709724 199.9885646 0.609215814 0.108435835 403.2751992 2.795926008 0.030633655 273325.159 0.001723047 2.763702857 199.1208548 LPS(ph)PTVAR ddPTM_A459_MK2206_30min_R1 1 LPSPTVAR 8 0 O95425-3;O95425;A0A6I8PIX7 O95425-3 SVIL Supervillin 1 LPS(0.957)PT(0.043)VAR 85.807 0.037516 0 2318.8 2009.9 2344.2 1736.7 1970.4 1941.5 2628.4 2255.9 2084.3 2257.2 TRUE FALSE 2121.573883 1879.055145 2185.082235 1870.460935 1891.914796 2051.426052 2453.064232 2236.176904 2300.970444 2536.838977 0.836306089 0.740707298 0.861340533 0.737319535 0.745776461 0.80865442 0.966976719 0.881481609 0.907022663 1 11.30881623 -7.160934426 5.11221579 0.928536977 0.783235241 0.695841311 0.048687492 0.132963749 5.36865006 0.018465094 0.014172392 6.90E-08 7.160934426 -0.145301735 LPS(ph)PTVAR ddPTM_A459_MK2206_30min_R2 1 LPSPTVAR 8 0 O95425-3;O95425;A0A6I8PIX7 O95425-3 SVIL Supervillin 1 LPS(0.989)PT(0.011)VAR 84.817 0.036143 1742000 15020 16875 18367 16946 15707 17344 20216 16359 12879 16511 TRUE FALSE 16169.94275 16037.01204 18979.34661 15561.45759 15090.26426 18004.03807 17561.61492 18497.17747 13999.19214 15972.24742 1.012377427 1.004054822 1.188270261 0.974281025 0.944780272 1.127207562 1.099508069 1.158082327 0.876469777 1 13.96327971 -8.271289536 24.98262803 0.938234896 1.062126245 0.276520871 0.081065915 1052.804007 2670159.53 0.076370848 0.020632132 5.35E-09 8.271289536 0.123891349 LPS(ph)SPVYEDAASFK ddPTM_A459_MK2206_30min_R2 1 LPSSPVYEDAASFK 14 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 LPS(0.903)S(0.097)PVYEDAASFK 168 0.00020418 1030200000 122320 119390 114280 113790 101330 92122 120660 106700 93312 128180 TRUE FALSE 131684.9132 113461.2662 118090.0382 104492.993 97351.27506 95627.76726 104817.1971 120646.0564 101428.1091 123997.4971 1.061996543 0.915028681 0.952358241 0.842702437 0.785106775 0.771207238 0.845317039 0.972971707 0.817985132 1 16.91995147 -4.472503571 1.058119024 0.857874991 1.276182783 0.374691873 0.073841424 3.314745403 1.966814244 0.023962935 1.823717643 3.37E-05 4.472503571 0.418307792 LPS(ph)SSSEMGSQDGSPLR ddPTM_A459_MK2206_30min_R2 1 LPSSSSEMGSQDGSPLR 17 0 A2A2G5;Q9UJ14-5;Q9UJ14 A2A2G5 GGT7 Gamma-glutamyltransferase 7;Gamma-glutamyltransferase 7 heavy chain;Gamma-glutamyltransferase 7 light chain 1 LPS(0.922)S(0.065)S(0.012)S(0.001)EMGSQDGSPLR 103.75 0.0051848 0 2891.6 3194.3 2907.3 3108 2652.5 2692.7 3204.3 1183.1 934.38 2653.8 TRUE FALSE 3112.983119 3035.675707 3004.227931 2854.066458 2548.349522 2795.172585 2783.571561 1337.735232 1015.650683 2567.206723 1.212595422 1.182481987 1.170232184 1.111740022 0.992654584 1.088799184 1.084280255 0.521085902 0.395624814 1 11.32598376 -7.744237732 10.65514432 0.593695746 1.118452617 0.664098433 0.155929956 0.182283708 110.2201458 0.072795437 0.040852015 1.80E-08 7.744237732 0.524756872 LPS(ph)TSGSEGVPFR ddPTM_A459_MK2206_30min_R1 4 LPSTSGSEGVPFR 13 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 LPS(0.884)T(0.097)S(0.018)GS(0.001)EGVPFR;LPS(0.938)T(0.053)S(0.006)GS(0.003)EGVPFR;LPS(0.931)T(0.063)S(0.004)GS(0.001)EGVPFR;LPS(0.914)T(0.072)S(0.006)GS(0.008)EGVPFR 149.57 0.0005159 66396000 2357.41 2222.76 2228.19 2215.65 2449.57 2118.94 2324.24 2422.22 2183.36 2456.67 TRUE FALSE 2156.8999 2078.05792 2076.946671 2386.299747 2351.99844 2238.912552 2169.19419 2401.042786 2410.328085 2761.020827 0.781196534 0.752641161 0.752238683 0.86428169 0.851858275 0.810900277 0.78564934 0.869621396 0.872984391 1 11.43098605 -14.52287875 0.102920728 1.61876346 0.691113963 0.777198769 0.033557855 90.83529469 0.629578232 11.85831942 0.572498813 3.00E-15 14.52287875 -0.927649497 LPS(ph)TSGSEGVPFR ddPTM_A459_MK2206_30min_R2 1 LPSTSGSEGVPFR 13 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 LPS(0.732)T(0.047)S(0.008)GS(0.213)EGVPFR 79.886 0.038182 3451000 4489 4786.1 3753.4 4489.2 4918.7 1911.6 6240.2 1655.4 4326.9 1862.5 TRUE FALSE 4832.681291 4548.429234 3878.536483 4122.418 4725.567124 1984.347278 5420.854244 1871.766464 4703.245941 1801.726778 2.682249802 2.52448334 2.152677382 2.28803726 2.622798963 1.101358598 3.008699383 1.038873645 2.610410191 1 10.81516454 -9.688600944 0.126237953 7.12E-13 3.087594102 0.29232062 0.609539321 29.55126953 1.125693382 19.58412158 7.55783827 2.05E-10 9.688600944 3.087594102 LPSANQGS(ph)PFK ddPTM_A459_MK2206_30min_R1 1 LPSANQGSPFK 11 0 E5RFE4;Q56NI9;E5RFP7;E5RIE3 E5RFE4 ESCO2 N-acetyltransferase ESCO2 1 LPSANQGS(1)PFK 139.64 0.0011523 34081000 2567.2 2861.8 2869.9 1806.3 1964.9 2048.6 2621.7 1694.9 2558.2 2520 TRUE FALSE 2348.846159 2675.4963 2675.099184 1945.421539 1886.633872 2164.589962 2446.811177 1680.081668 2824.134045 2832.196625 0.82933725 0.944671806 0.944531591 0.686894943 0.666138027 0.76427955 0.863927015 0.59320799 0.997153241 1 11.46770571 -5.746751239 24.91061722 0.775098112 0.910029403 0.116861281 0.13020554 381.7858855 647491.1037 0.033567728 0.057822707 1.79E-06 5.746751239 0.134931291 LPSANQGS(ph)PFK ddPTM_A459_MK2206_30min_R2 4 LPSANQGSPFK 11 0 E5RFE4;Q56NI9;E5RFP7;E5RIE3 E5RFE4 ESCO2 N-acetyltransferase ESCO2 1 LPS(0.288)ANQGS(0.712)PFK;LPS(0.001)ANQGS(0.999)PFK;LPSANQGS(1)PFK;LPSANQGS(1)PFK 138.31 0.0012616 117371700 272820 249118 234299 227480 218229 175729 273245 213517 172443 265418 TRUE FALSE 293707.309 236747.1624 242110.4117 208894.1563 209660.2329 182416.4902 237367.6033 241424.405 187441.7804 256757.4324 1.143909667 0.922065469 0.942953859 0.813585626 0.816569285 0.710462356 0.924481917 0.94028205 0.730034487 1 17.97004651 -4.040293688 1.045993053 0.845463259 2.087467263 0.483360134 0.088901085 6.061731669 1.762327823 0.027577673 12.20020577 9.11E-05 4.040293688 1.242004004 LPSAQT(ph)PNGTDYVASGK ddPTM_A459_MK2206_30min_R1 1 LPSAQTPNGTDYVASGK 17 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 LPSAQT(0.5)PNGT(0.5)DYVASGK 145.8 0.0006476 0 461.17 513.69 487.65 294.84 418.63 420.91 489.1 460.32 561.72 373.47 TRUE FALSE 421.9450698 480.2486876 454.5496767 317.5486279 401.9550806 444.7415605 456.4730314 456.2954708 620.1128041 419.7382832 1.00525753 1.144162224 1.082935951 0.756539588 0.957632641 1.059568732 1.087518222 1.087095195 1.477379665 1 8.713346243 -8.021506855 17.21233413 1.253209551 1.016294708 0.270402653 0.145993042 18.08433125 14468.18753 0.095016287 0.037379906 9.52E-09 8.021506855 -0.236914843 LPSAQT(ph)PNGTDYVASGK ddPTM_A459_MK2206_30min_R2 1 LPSAQTPNGTDYVASGK 17 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 LPSAQT(0.963)PNGT(0.037)DYVASGK 192.72 1.96E-07 6024100 15716 17040 17105 16665 16165 14072 20838 12550 12163 17302 TRUE FALSE 16919.22904 16193.81838 17675.27216 15303.41619 15530.28088 14607.51982 18101.94557 14190.32809 13220.91575 16737.43716 1.010861393 0.967520787 1.056032175 0.914322548 0.927876875 0.872745312 1.081524334 0.847819649 0.789900845 1 14.03079102 -5.781218274 24.60373361 0.918022258 1.00707638 0.22631493 0.078059742 305.9002499 380520.1143 0.022366641 0.033227522 1.65E-06 5.781218274 0.089054122 LPSGS(ph)GAAS(ph)PTGSAVDIR ddPTM_A459_MK2206_30min_R1 3 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 LPS(0.058)GS(0.942)GAAS(0.972)PT(0.028)GS(0.001)AVDIR;LPS(0.006)GS(0.994)GAAS(0.991)PT(0.009)GS(0.001)AVDIR;LPS(0.022)GS(0.978)GAAS(0.853)PT(0.145)GS(0.002)AVDIR 137.85 0.0061812 33004000 4555.3 4236.1 4214.4 3506.56 5407.4 4775 4534.4 4186 3775.3 3274.53 TRUE FALSE 4167.847814 3960.32912 3928.33827 3776.635859 5192.011808 5045.356374 4231.918449 4149.402243 4167.755945 3680.203498 1.132504715 1.076116884 1.067424199 1.026202997 1.410794759 1.370944943 1.149914251 1.127492609 1.132479752 1 11.84556983 -6.151164894 20.13058723 1.211895049 1.075015522 0.209827043 0.115233795 9.213598311 1665.907915 0.035952501 0.046414712 7.06E-07 6.151164894 -0.136879527 LPSGS(ph)GAAS(ph)PTGSAVDIR ddPTM_A459_MK2206_30min_R2 1 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 LPS(0.019)GS(0.981)GAAS(0.858)PT(0.135)GS(0.007)AVDIR 135.95 0.0064689 5196400 15871 21890 18900 21265 22712 22604 22840 14448 17593 14136 TRUE FALSE 17086.09596 20802.97443 19530.11657 19527.58148 21820.21276 23464.21106 19841.08056 16336.40321 19123.20734 13674.74348 1.249463728 1.521269811 1.42818888 1.428003495 1.595657922 1.715879431 1.450928904 1.19464056 1.398432619 1 13.73922615 -8.587175244 0.931340335 1.013579251 1.487404226 0.502868664 0.137759926 0.562591844 1.062760579 0.138022279 0.04697147 2.59E-09 8.587175244 0.473824975 LPSGS(ph)PSPK ddPTM_A459_MK2206_30min_R2 2 LPSGSPSPK 9 0 A0A075B784;Q9P275;E9PEW0 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LPS(0.046)GS(0.536)PS(0.418)PK;LPS(0.313)GS(0.684)PS(0.003)PK 90.913 0.027914 9579900 124278 90077 84697 75397 76687 56120 99467 74801 57749 96553 TRUE FALSE 133792.8192 85603.90716 87520.75571 69236.82392 73675.88306 58255.68593 86406.86342 84577.74753 62771.90363 93402.48352 1.432433209 0.916505685 0.937028143 0.741273907 0.788800043 0.623705963 0.925102419 0.905519258 0.672058186 1 16.51117329 -3.798357411 1.217597448 0.805830701 6.236577124 0.713846523 0.114894008 7.099302819 1.424523077 0.03325722 84.93248048 0.00015909 3.798357411 5.430746423 LPSGSGAAS(ph)PTGSAVDIR ddPTM_A459_MK2206_30min_R1 6 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LPSGSGAAS(0.989)PT(0.011)GSAVDIR;LPS(0.004)GS(0.026)GAAS(0.907)PT(0.063)GSAVDIR;LPSGSGAAS(0.988)PT(0.012)GSAVDIR;LPSGSGAAS(0.978)PT(0.022)GSAVDIR;LPSGSGAAS(0.662)PT(0.338)GSAVDIR;LPSGS(0.014)GAAS(0.873)PT(0.07)GS(0.043)AVDIR 272.13 3.76E-54 2710060000 3420.67 3632.03 4017.06 3401.42 3843.14 3526.89 4194.27 3758.6 3638.05 3169.18 TRUE FALSE 3129.724054 3395.584187 3744.393159 3663.397958 3690.059596 3726.579464 3914.477901 3725.738956 4016.238316 3561.801944 0.878691208 0.95333324 1.051263719 1.028523768 1.036009204 1.046262404 1.099016162 1.046026426 1.127586087 1 11.79839158 -3.545164505 0.67177494 1.066013218 5.45E-06 0.736003625 0.034413235 6.683144529 0.636236192 0.013611583 7.940775748 0.000284994 3.545164505 -1.066007765 LPSGSGAAS(ph)PTGSAVDIR ddPTM_A459_MK2206_30min_R2 7 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LPSGSGAAS(0.989)PT(0.011)GSAVDIR;LPSGSGAAS(0.996)PT(0.004)GSAVDIR;LPSGSGAAS(0.986)PT(0.014)GSAVDIR;LPSGSGAAS(0.991)PT(0.009)GSAVDIR;LPS(0.002)GS(0.172)GAAS(0.643)PT(0.17)GS(0.013)AVDIR;LPSGSGAAS(0.917)PT(0.082)GS(0.001)AVDIR;LPSGSGAAS(0.918)PT(0.082)GS(0.001)AVDIR 279.5 6.20E-67 2298224800 137740.5 150245.1 174654.2 158880.4 168714.7 169286.3 185280.6 148538.2 160277.5 184464.3 TRUE FALSE 148286.0186 142784.1468 180477.0839 145899.3631 162090.1132 175728.6088 160953.0347 167952.6527 174218.1472 178445.245 0.830988904 0.800156635 1.011386344 0.817614182 0.908346497 0.984776079 0.901974354 0.941199934 0.976311514 1 17.44512193 -1.522878745 0.190257846 0.997247711 0.205934102 0.422202923 0.056741826 55.24836161 0.646320046 0.114124347 12.83974417 0.03 1.522878745 -0.791313609 LPSGSGAASPT(ph)GSAVDIR ddPTM_A459_MK2206_30min_R1 1 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LPS(0.001)GS(0.008)GAAS(0.17)PT(0.655)GS(0.166)AVDIR 85.362 0.017921 13655000 1145.4 1654.3 1581.9 1331.4 1452.5 1487 1573.7 1584.5 1428 1308.8 TRUE FALSE 1047.977715 1546.604769 1474.525035 1433.944659 1394.643849 1571.192655 1468.721344 1570.646884 1576.44571 1470.944025 0.712452478 1.051436862 1.002434498 0.974846517 0.94812843 1.06815258 0.998488943 1.067781545 1.071723793 1 10.52252663 -4.757752369 24.99999994 1.019025387 0.712452043 0.836633456 0.040811036 42.68370466 289376.8438 0.010700916 0.077454939 1.75E-05 4.757752369 -0.306573343 LPSPEPS(ph)MSPK ddPTM_A459_MK2206_30min_R1 1 LPSPEPSMSPK 11 0 O43303-2;O43303 O43303-2 CCP110 Centriolar coiled-coil protein of 110 kDa 1 LPSPEPS(0.926)MS(0.074)PK 84.352 0.036404 4732200 4339.8 2794.7 3260.4 3823.7 3630.6 4501.7 3389.2 3250.9 2896.9 2299.2 TRUE FALSE 3970.677221 2612.764522 3039.093132 4118.202037 3485.985514 4756.582364 3163.112652 3222.477724 3198.043122 2584.042254 1.536614664 1.011115247 1.176100401 1.593705378 1.349043542 1.840752548 1.224094787 1.24706851 1.237612549 1 11.33541395 -8.43161185 1.213924023 1.014058098 1.38668979 0.22742792 0.221257101 0.758621607 2.418958023 0.219576974 0.069139677 3.70E-09 8.43161185 0.372631692 LPSPEPSMS(ph)PK ddPTM_A459_MK2206_30min_R2 2 LPSPEPSMSPK 11 0 O43303-2;O43303 O43303-2 CCP110 Centriolar coiled-coil protein of 110 kDa 1 LPSPEPS(0.067)MS(0.933)PK;LPSPEPS(0.108)MS(0.892)PK 94.717 0.021938 9958500 67428 97744 78238 88261 105207 96362 100838 78497 78036 82538 TRUE FALSE 72590.33952 92890.17509 80846.41587 81049.79397 101076.0446 100029.1234 87597.84947 88756.82742 84823.43022 79844.79182 0.909143075 1.163384273 1.012544639 1.015091806 1.265906545 1.252794593 1.097101608 1.111616993 1.062353953 1 16.28491068 -4.753208399 24.91172808 1.115544983 0.909142676 0.305109835 0.089983384 389.6290979 1179147.755 0.023689597 0.26102012 1.77E-05 4.753208399 -0.206402308 LPSPT(ph)SPFSSLSQDQAATSK ddPTM_A459_MK2206_30min_R2 1 LPSPTSPFSSLSQDQAATSK 20 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;H0YDG6;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 LPS(0.355)PT(0.502)S(0.143)PFSSLSQDQAATSK 142.72 0.00011158 18010000 41806 38642 35815 34135 29766 27613 42374 33289 25384 40728 TRUE FALSE 45006.6995 36723.09447 37009.05422 31346.06131 28597.23728 28663.83206 36810.2429 37639.9866 27591.85444 39399.0487 1.142329599 0.93208074 0.939338777 0.795604522 0.72583573 0.727525994 0.934292683 0.955352676 0.700317783 1 15.26587318 -4.568124501 1.199502339 0.832427372 1.403398558 0.445312051 0.101086892 2.20292036 1.946171892 0.031280223 1.772460625 2.70E-05 4.568124501 0.570971186 LPSS(ph)PASPSPK ddPTM_A459_MK2206_30min_R2 4 LPSSPASPSPK 11 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 LPS(0.012)S(0.982)PAS(0.005)PSPK;LPS(0.015)S(0.985)PASPSPK;LPS(0.077)S(0.923)PASPSPK;LPS(0.188)S(0.736)PAS(0.031)PS(0.045)PK 160.86 0.00060471 56442500 326454 264716 294277 286654 200948 211990 318694 265787 231416 355720 TRUE FALSE 351447.5692 251570.5884 304088.0483 263233.4512 193057.7718 220057.428 276849.095 300526.2735 251544.1454 344112.8855 1.02131476 0.731069945 0.883686898 0.764962494 0.561030348 0.639491973 0.80452987 0.873336298 0.730993101 1 18.39252239 -10.44807581 18.05880544 0.999999933 0.77321632 0.224063888 0.123001408 0 0 0.124072919 0.030092103 3.56E-11 10.44807581 -0.226783613 LPSS(ph)PLGCR ddPTM_A459_MK2206_30min_R1 2 LPSSPLGCR 9 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 LPS(0.303)S(0.697)PLGCR;LPS(0.052)S(0.948)PLGCR 113.44 0.0091106 44569000 6637.3 6663.3 6685.8 5386 6651.2 5548.1 6913.6 6367.5 5499.6 5380.6 TRUE FALSE 6072.762781 6229.517959 6231.986524 5800.830653 6386.26862 5862.228627 6452.406359 6311.829619 6071.303101 6047.189349 1.004228978 1.030150967 1.030559184 0.959260628 1.05607221 0.96941377 1.067009148 1.043762524 1.003987596 1 12.56204904 -7.271360134 24.99893298 1.032336689 1.010231827 0.081611732 0.032239088 1738.491473 4380745.167 0.012807374 0.008763386 5.35E-08 7.271360134 -0.022104863 LPSS(ph)PLGCR ddPTM_A459_MK2206_30min_R2 1 LPSSPLGCR 9 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 LPS(0.046)S(0.954)PLGCR 115.23 0.0082322 50705000 65414 65986 58266 61105 65509 54170 74411 56025 52909 58782 TRUE FALSE 70422.14613 62709.23119 60208.55936 56112.52603 62936.7875 56231.47731 64640.74632 63347.65986 57510.92918 56863.94815 1.23843223 1.102794182 1.05881778 0.986785615 1.10679595 0.988877472 1.136761488 1.114021483 1.011377702 1 15.79522665 -4.760540932 2.380906463 1.055436446 1.287719926 0.544121866 0.051845181 0.480883851 3.184210387 0.013415633 0.239486144 1.74E-05 4.760540932 0.232283481 LPSS(ph)PVYEDAASFK ddPTM_A459_MK2206_30min_R1 5 LPSSPVYEDAASFK 14 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 LPS(0.001)S(0.999)PVYEDAASFK;LPS(0.001)S(0.999)PVYEDAASFK;LPS(0.002)S(0.998)PVYEDAASFK;LPSS(1)PVYEDAASFK;LPS(0.119)S(0.881)PVYEDAASFK 204.17 2.69E-05 2744926500 33944.33 32533.7 35250.59 25222.04 26420.57 28563.64 35723.2 25132.78 34915.8 39022.76 TRUE FALSE 31057.18648 30415.75022 32857.87816 27164.64589 25368.18275 30180.88861 33340.17051 24913.04675 38545.42236 43857.19412 0.70814349 0.693517924 0.749201558 0.619388596 0.578426944 0.68816278 0.760198439 0.568049262 0.878884825 1 15.42052589 -8.467738583 4.581190376 0.998802358 0.673609844 0.759914013 0.062177962 0.08662465 3.741099613 0.060901704 0.015891172 3.41E-09 8.467738583 -0.325192514 LPSS(ph)PVYEDAASFK ddPTM_A459_MK2206_30min_R2 8 LPSSPVYEDAASFK 14 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 LPS(0.002)S(0.998)PVYEDAASFK;LPS(0.042)S(0.951)PVY(0.007)EDAASFK;LPS(0.049)S(0.951)PVYEDAASFK;LPS(0.409)S(0.591)PVYEDAASFK;LPS(0.006)S(0.994)PVYEDAASFK;LPS(0.079)S(0.92)PVYEDAAS(0.001)FK;LPS(0.004)S(0.996)PVYEDAASFK;LPS(0.01)S(0.99)PVYEDAASFK 225.21 1.15E-09 1404540400 1427503.3 1197558.3 1262887.7 1281602 1050566.8 975418.4 1295700 1040114.6 905455.4 1276000.3 TRUE FALSE 1536794.05 1138089.296 1304991.746 1176891.017 1009316.269 1012538.631 1125573.034 1176061.149 984210.274 1234364.515 1.245008287 0.922004224 1.057217483 0.953438796 0.817680885 0.820291428 0.911864381 0.952766493 0.797341678 1 20.23533706 -1.522878905 0.764972739 0.889248856 65.29778579 0.603424289 0.079873147 282.9607411 1.146541796 0.029413731 31464.05168 0.029999989 1.522878905 64.40853693 LPSSPAS(ph)PSPK ddPTM_A459_MK2206_30min_R2 1 LPSSPASPSPK 11 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 LPSS(0.005)PAS(0.743)PS(0.252)PK 150.51 0.00061227 21309000 122880 85358 104570 85319 56590 62129 95852 76697 66581 121230 TRUE FALSE 132287.7873 81119.24584 108056.3116 78348.16478 54367.99226 64493.36263 83266.51726 86721.56124 72372.09503 117274.275 1.128020508 0.69170537 0.921398249 0.668076309 0.463596916 0.549936144 0.710015195 0.739476422 0.617118247 1 16.83952706 -1.789633945 0.973366687 0.670786209 199.9999997 0.387583407 0.153809375 790.1657553 2.220326775 0.049353057 349609.0695 0.016231777 1.789633945 199.3292134 LPSSPASPS(ph)PK ddPTM_A459_MK2206_30min_R2 1 LPSSPASPSPK 11 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 LPSS(0.004)PAS(0.347)PS(0.648)PK 114.24 0.0066371 6848100 54575 47244 48532 37958 34482 27689 44653 39418 30597 54867 TRUE FALSE 58753.30396 44897.93166 50150.03266 34856.70998 33128.06342 28742.7243 38790.00746 44570.06794 33258.27175 53076.69428 1.106951078 0.845906707 0.944859761 0.656723454 0.62415461 0.541531923 0.730829378 0.839729537 0.626607821 1 15.6957909 -5.114337998 1.206177819 0.704571561 1.120993385 0.402491193 0.136385674 0.877761338 1.614194166 0.04273327 0.396105292 7.69E-06 5.114337998 0.416421824 LPSSSGLPAADVSPATAEEPLS(ph)PSTPTR ddPTM_A459_MK2206_30min_R1 2 LPSSSGLPAADVSPATAEEPLSPSTPTR 28 0 O43149 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 LPSSSGLPAADVSPATAEEPLS(0.793)PS(0.154)T(0.047)PT(0.006)R;LPSSSGLPAADVSPATAEEPLS(0.626)PS(0.232)T(0.086)PT(0.055)R 161.91 8.96E-18 19505300 5709.5 5296.4 5705.5 4697.2 5999.1 4773.4 5709.2 4928.3 4531.4 4933.9 TRUE FALSE 5223.877043 4951.603397 5318.226556 5058.979158 5760.143144 5043.665783 5328.349685 4885.212393 5002.455246 5545.148781 0.942062558 0.892961324 0.959077342 0.912325234 1.038771613 0.909563653 0.960902925 0.880988515 0.902131835 1 12.43701045 -5.420789825 0.003145421 1.865798489 6.48E-08 0.041059582 0.046945112 306296.2606 187.6991807 54658.53649 56690.29801 3.79E-06 5.420789825 -1.865798425 LPSTSDDCPAIGT(ph)PLR ddPTM_A459_MK2206_30min_R1 2 LPSTSDDCPAIGTPLR 16 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 LPSTSDDCPAIGT(1)PLR;LPSTSDDCPAIGT(1)PLR 178.99 2.54E-06 41937000 1302.57 1425.86 1346.95 763.27 1139.23 1280.53 1631.11 759.58 1551.93 1945.79 TRUE FALSE 1191.779581 1333.036255 1255.522787 822.0571877 1093.852057 1353.032502 1522.301628 752.9390721 1713.258677 2186.849155 0.544975669 0.609569367 0.574124093 0.375909415 0.500195477 0.618713229 0.696116431 0.344303159 0.783437062 1 11.09463799 -8.513890746 6.039474017 0.999833924 0.539553825 0.688597439 0.101733966 0.071701864 13.13262399 0.098888418 0.025629756 3.06E-09 8.513890746 -0.460280099 LPSTSDDCPAIGT(ph)PLR ddPTM_A459_MK2206_30min_R2 4 LPSTSDDCPAIGTPLR 16 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 LPSTSDDCPAIGT(1)PLR;LPSTSDDCPAIGT(1)PLR;LPSTSDDCPAIGT(1)PLR;LPSTSDDCPAIGT(1)PLR 183.71 2.00E-06 87519000 69593 60512 57892 61597 54515 53361.5 62321 49349 40830.7 54552.1 TRUE FALSE 74921.09359 57507.06207 59822.09039 56564.32806 52374.46718 55392.20927 54138.17784 55799.08374 44382.08048 52772.06944 1.419711116 1.089725354 1.133593793 1.071861093 0.992465669 1.049650125 1.025886959 1.057360159 0.841014593 1 15.68748694 -1.522878745 0.681313231 1.001738955 43.79374205 0.764052618 0.067405684 123.1973509 0.704602957 0.026331027 8003.536924 0.03 1.522878745 42.7920031 LQAALDDEEAGGRPAMEPGNGS(ph)LDLGGDSAGR ddPTM_A459_MK2206_30min_R1 11 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR 32 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 LQAALDDEEAGGRPAMEPGNGS(0.999)LDLGGDS(0.001)AGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(0.999)LDLGGDS(0.001)AGR;LQAALDDEEAGGRPAMEPGNGS(0.982)LDLGGDS(0.018)AGR;LQAALDDEEAGGRPAMEPGNGS(0.995)LDLGGDS(0.005)AGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(0.992)LDLGGDS(0.008)AGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(0.985)LDLGGDS(0.015)AGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR 152.26 3.71E-21 370557600 12886.81 13372.95 13394.06 11913.49 14508.77 13840.09 14364.75 13265.04 12186.17 11875.08 TRUE FALSE 11790.71914 12502.36852 12484.90853 12831.06906 13930.85497 14623.70394 13406.50374 13149.06515 13452.96598 13346.25456 0.883447793 0.936769823 0.935461591 0.961398496 1.043802582 1.095715945 1.004514313 0.985225113 1.007995608 1 13.70414731 -5.994256601 2.667974803 1.024494157 0.919272912 0.683566672 0.03206813 0.177283135 2.549835441 0.010881639 0.016437643 1.01E-06 5.994256601 -0.105221245 LQAALDDEEAGGRPAMEPGNGS(ph)LDLGGDSAGR ddPTM_A459_MK2206_30min_R2 13 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR 32 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 LQAALDDEEAGGRPAMEPGNGS(0.994)LDLGGDS(0.006)AGR;LQAALDDEEAGGRPAMEPGNGS(0.997)LDLGGDS(0.003)AGR;LQAALDDEEAGGRPAMEPGNGS(0.988)LDLGGDS(0.012)AGR;LQAALDDEEAGGRPAMEPGNGS(0.994)LDLGGDS(0.006)AGR;LQAALDDEEAGGRPAMEPGNGS(0.997)LDLGGDS(0.003)AGR;LQAALDDEEAGGRPAMEPGNGS(0.995)LDLGGDS(0.005)AGR;LQAALDDEEAGGRPAMEPGNGS(0.997)LDLGGDS(0.003)AGR;LQAALDDEEAGGRPAMEPGNGS(0.998)LDLGGDS(0.002)AGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(0.962)LDLGGDS(0.038)AGR;LQAALDDEEAGGRPAMEPGNGS(0.996)LDLGGDS(0.004)AGR 106.18 5.82E-12 108647200 154698.2 200250.9 189005.1 235155.5 207383.7 233092 225927.7 176248.6 198554.3 197110.4 TRUE FALSE 166542.0131 190306.7315 195306.4357 215942.5434 199240.7739 241962.4794 196263.1216 199284.8972 215824.1941 190678.7038 0.873416957 0.99804922 1.024269789 1.132494291 1.044903127 1.268953872 1.029287056 1.045134528 1.131873617 1 17.5407842 -4.798893044 1.187523063 1.097231367 0.777634014 0.454358816 0.073399382 1.337643343 1.62530902 0.022212759 0.529321809 1.59E-05 4.798893044 -0.319597353 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR ddPTM_A459_MK2206_30min_R1 1 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR 32 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 104.89 3.44E-11 5872200 160.46 261.93 64.365 224.42 274.49 167.22 223.27 0 186.19 0 FALSE TRUE 146.8120344 244.8783094 59.99608313 241.7048673 263.5564821 176.6878519 208.3760657 0 205.5451168 0 0 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR ddPTM_A459_MK2206_30min_R2 2 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR 32 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 107.34 2.57E-11 11509900 13666.1 13987.3 13667.1 14581.4 14073.9 14550.2 15577 12715.8 13006.3 15748.4 FALSE TRUE 14712.38712 13292.71102 14122.75429 13390.05298 13521.28797 15103.91806 13531.72119 14377.79872 14137.56446 15234.531 0.965726292 0.87253825 0.927022584 0.878927811 0.887542122 0.99142652 0.888226962 0.94376379 0.927994729 1 13.89505747 -6.72078326 24.99972638 0.942889408 0.904097763 0.231144007 0.038801194 246.5003924 151574.0496 0.012144426 0.012144283 1.90E-07 6.72078326 -0.038791646 LQADPKPIS(ph)PQQK ddPTM_A459_MK2206_30min_R2 2 LQADPKPISPQQK 13 1 O75128-3;O75128;O75128-7;O75128-6;H7C1N2;J3KR05;O75128-2 O75128-3;H7C1N2 COBL Protein cordon-bleu 1 LQADPKPIS(1)PQQK;LQADPKPIS(1)PQQK 78.326 0.022727 17398000 108563 116612 120605 114775 107849 67063 123254 86572 83026 107463 TRUE FALSE 116874.6668 110821.2176 124625.9105 105397.5154 103614.3064 69615.12946 107070.6017 97887.25765 90247.4514 103956.4911 1.124265214 1.066034612 1.198827598 1.013861801 0.996708385 0.669656399 1.029955904 0.941617561 0.868127141 1 16.66562032 -6.171596801 2.499042545 0.904387499 1.12030358 0.471086834 0.100123416 0.253465431 3.098478229 0.031820738 0.042939512 6.74E-07 6.171596801 0.215916081 LQAKES(ph)PQR ddPTM_A459_MK2206_30min_R1 1 LQAKESPQR 9 1 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 LQAKES(1)PQR 114.71 0.039865 50853000 3798.7 3733 3846.4 3448.2 3392.1 2756.7 3236.4 3534.7 1850.4 1807.8 TRUE FALSE 3475.600617 3489.981021 3585.317085 3713.780961 3256.985474 2912.781972 3020.505661 3503.796491 2042.755702 2031.763912 1.710632124 1.717709917 1.764632723 1.827860481 1.60303343 1.43362226 1.486642047 1.724509659 1.005409974 1 10.98851706 -8.192625468 0.529989155 0.961289148 1.751850629 0.720197944 0.151656633 0.465798483 0.324363332 0.161055122 0.086122708 6.42E-09 8.192625468 0.790561481 LQAVTDDHIR ddPTM_A459_MK2206_30min_R1 3 LQAVTDDHIR 10 0 P30043;A0A2R8YEP4 P30043 BLVRB Flavin reductase (NADPH) 0 ;; 187.16 0.00026411 49610800 22220.5 22042.7 22958.8 18904.5 24751.5 20643.6 23049.1 20517.3 17762.2 17022.9 FALSE TRUE 20330.52979 20607.71622 21400.42062 20360.52787 23765.59534 21812.42279 21511.53659 20337.91941 19608.64425 19131.82537 1.062654995 1.077143233 1.118577042 1.064222962 1.242202189 1.140111953 1.124384954 1.063041242 1.024922812 1 14.22368691 -8.056054239 2.167716171 1.007707805 1.120517261 0.433705207 0.048934541 0.333410421 2.835437053 0.044691277 0.014496626 8.79E-09 8.056054239 0.112809456 LQAVTDDHIR ddPTM_A459_MK2206_30min_R2 3 LQAVTDDHIR 10 0 P30043;A0A2R8YEP4 P30043 BLVRB Flavin reductase (NADPH) 0 ;; 187.16 0.00026411 56026600 219352 263438 230172 275653 248057 265993 267263 211768 235631 243537 FALSE TRUE 236145.7578 250356.052 237845.8196 253131.2681 238317.0358 276115.55 232171.0471 239446.8047 256125.7585 235590.4076 1.00235727 1.062675066 1.009573446 1.074454901 1.011573596 1.172015248 0.985485994 1.016369075 1.087165479 1 17.84592127 -4.748907404 23.70941106 1.047731582 1.002357063 0.059118034 0.052762462 945.9231959 1789389.793 0.012562049 0.201768264 1.78E-05 4.748907404 -0.045374519 LQDAEIAR ddPTM_A459_MK2206_30min_R1 1 LQDAEIAR 8 0 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 0 141.48 0.031517 51464000 5178.1 5315.3 5526.6 4576.6 5528.3 4890.2 5807.6 5740.9 4606.1 4061.5 FALSE TRUE 4737.675404 4969.273004 5151.46979 4929.090525 5308.096105 5167.078898 5420.185601 5690.707917 5084.920578 4564.669283 1.037901129 1.088638124 1.128552688 1.079835191 1.162865429 1.131972237 1.187421315 1.246685699 1.113973491 1 12.15629462 -6.261087946 24.72844986 1.15474169 1.087283727 0.139323222 0.063176121 44.2688858 3114962.64 0.018559849 0.022568338 5.48E-07 6.261087946 -0.067457963 LQDEIQNMKEEMAR ddPTM_A459_MK2206_30min_R1 2 LQDEIQNMKEEMAR 14 1 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 ; 171.36 0.00040145 39363000 4163.3 4678.9 4324.1 4670.4 5305.5 4106.4 4321.4 4250.1 3121.4 2612.75 FALSE TRUE 3809.189473 4374.30276 4030.59214 5030.115017 5094.1707 4338.900819 4033.127291 4212.941824 3445.8807 2936.437195 1.297214692 1.489663313 1.372613093 1.712999354 1.734813436 1.477607226 1.373476435 1.434712049 1.173490346 1 11.51985107 -8.34804738 1.165540859 0.997447689 1.51717895 0.617018792 0.131018657 0.326352647 0.929433798 0.134116477 0.043260674 4.49E-09 8.34804738 0.519731261 LQDGTPQAALS(ph)PLTPAR ddPTM_A459_MK2206_30min_R2 2 LQDGTPQAALSPLTPAR 17 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 LQDGTPQAALS(0.994)PLT(0.006)PAR;LQDGTPQAALS(0.652)PLT(0.348)PAR 113.14 0.0018486 14508800 47320 47132 42412 47224 53828 56854 57145 46327 48790 52316 TRUE FALSE 50942.85558 44791.49342 43825.99491 43365.64814 51714.44226 59017.61881 49641.79286 52382.09796 53033.66601 50608.9332 1.006598092 0.885051128 0.865973498 0.856877341 1.021844148 1.166150224 0.980889928 1.035036596 1.047911162 1 15.62710444 -6.360842692 5.601088606 1.048798366 0.900114019 0.562821703 0.059833021 0.166731803 7.649500953 0.019009945 0.021611601 4.36E-07 6.360842692 -0.148684347 LQEDKEQMAQQLAEETQGFQR ddPTM_A459_MK2206_30min_R1 1 LQEDKEQMAQQLAEETQGFQR 21 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 69.024 0.01951 23325000 1645.9 1485.2 1725.3 1744.3 1742.1 1199.7 1625.9 1855.6 1661.9 1303.9 FALSE TRUE 1505.907562 1388.51321 1608.191443 1878.646288 1672.708468 1267.625977 1517.439178 1839.376685 1834.660452 1465.436976 1.027616736 0.947507967 1.097414266 1.281970033 1.141440059 0.86501569 1.035485799 1.255172836 1.251954524 1 10.51711521 -7.749971989 24.99607269 1.190172766 1.058565358 0.140646145 0.124008267 381.8737677 832394.7275 0.063196769 0.036075723 1.78E-08 7.749971989 -0.131607408 LQEDPNYS(ph)PQR ddPTM_A459_MK2206_30min_R1 2 LQEDPNYSPQR 11 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710;P46379-4;H0Y4L1 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 LQEDPNYS(1)PQR;LQEDPNYS(1)PQR 167.73 0.00052008 22235000 7780.4 7402.4 7343.4 4858.4 6426 7260 8013.2 5732 8277.8 9569.1 TRUE FALSE 7118.636123 6920.502415 6844.950468 5232.59481 6170.038813 7671.054926 7478.654049 5681.885728 9138.306932 10754.59235 0.661915942 0.643492769 0.636467682 0.486545156 0.573712012 0.713281794 0.695391681 0.528321813 0.84971207 1 13.39266522 -8.469896294 4.033406503 0.998396724 0.619728244 0.777574424 0.06798816 0.090201765 3.080950924 0.069374182 0.01819597 3.39E-09 8.469896294 -0.378668481 LQEDPNYS(ph)PQR ddPTM_A459_MK2206_30min_R2 2 LQEDPNYSPQR 11 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710;P46379-4;H0Y4L1 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 LQEDPNYS(1)PQR;LQEDPNYS(1)PQR 175.88 7.35E-05 50783000 98020 75269 72723 92429 73485 79345 88271 76664 68056 86035 TRUE FALSE 105524.4866 71531.25091 75147.54852 84877.25503 70599.60967 82364.52957 76680.91167 86684.24803 73975.38786 83227.685 1.267901259 0.859464623 0.90291528 1.019819968 0.848270737 0.989628987 0.921338995 1.041531409 0.888831497 1 16.34477589 -4.752466005 24.99621919 0.941840932 1.267901886 0.695776969 0.064785728 188.3872347 524732.8554 0.015262018 0.181214796 1.77E-05 4.752466005 0.326060954 LQEDPNYS(ph)PQRFPNAQR ddPTM_A459_MK2206_30min_R1 5 LQEDPNYSPQRFPNAQR 17 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710;P46379-4;H0Y4L1 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 LQEDPNY(0.386)S(0.614)PQRFPNAQR;LQEDPNY(0.029)S(0.971)PQRFPNAQR;LQEDPNYS(1)PQRFPNAQR;LQEDPNY(0.003)S(0.997)PQRFPNAQR;LQEDPNYS(1)PQRFPNAQR 126.5 0.005528 101960800 12980.3 11834.1 12420.6 11225.5 13236.2 10888.1 12623.1 11868 10608.8 8390.51 TRUE FALSE 11876.25732 11063.69794 11577.52428 12090.08996 12708.97413 11504.57481 11781.03603 11764.23933 11711.62272 9429.989724 1.259413602 1.173246023 1.227734559 1.282089409 1.347718767 1.219998658 1.249315893 1.247534692 1.241954983 1 13.20304048 -9.741153841 1.126635033 0.997532432 1.251109333 0.758285691 0.042357336 11.62877884 9.925458638 0.180355522 0.013523529 1.81E-10 9.741153841 0.253576901 LQEDPNYS(ph)PQRFPNAQR ddPTM_A459_MK2206_30min_R2 3 LQEDPNYSPQRFPNAQR 17 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710;P46379-4;H0Y4L1 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 LQEDPNY(0.12)S(0.88)PQRFPNAQR;LQEDPNY(0.018)S(0.982)PQRFPNAQR;LQEDPNY(0.062)S(0.938)PQRFPNAQR 73.984 0.013125 87867000 109879 137643 113329 119922 141669 141674 146537 100464 115796 137342 TRUE FALSE 118291.4207 130807.8488 117107.3323 110123.989 136106.3632 147065.5033 127296.5159 113594.9897 125867.7268 132860.5418 0.890342754 0.984550018 0.881430489 0.828869034 1.024430289 1.10691633 0.958121306 0.854994178 0.947367255 1 17.01955318 -6.274509292 24.9017107 0.979775993 0.90153981 0.26546335 0.06954059 1290.094177 2457971.323 0.024258659 0.027673843 5.31E-07 6.274509292 -0.078236183 LQEEERER ddPTM_A459_MK2206_30min_R1 2 LQEEERER 8 1 H3BNC9;P08708;H0YN88;A0A075B716 H3BNC9 RPS17 40S ribosomal protein S17 0 ; 150.36 3.34E-05 0 7079 5916.2 5617.3 7047.9 5659 4436.6 5787.8 7869.2 1158.99 2123.41 FALSE TRUE 6476.893877 5531.054305 5236.013327 7590.730479 5433.590047 4687.796458 5401.706422 7800.400414 1279.471158 2386.474062 2.714001372 2.317667891 2.194037392 3.180730351 2.276827615 1.964319048 2.263467477 3.268587972 0.536134534 1 11.22066494 -8.272828717 24.99969051 0.768066917 2.491198907 0.739629016 0.416035067 415.3412469 911667.6126 0.387672122 0.103648449 5.34E-09 8.272828717 1.72313199 LQEEGGGS(ph)DEEETGSPSEDGMQSAR ddPTM_A459_MK2206_30min_R2 2 LQEEGGGSDEEETGSPSEDGMQSAR 25 0 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 1 LQEEGGGS(1)DEEETGSPSEDGMQSAR;LQEEGGGS(1)DEEETGSPSEDGMQSAR 163.06 1.33E-13 21741800 63272 70727 64016 66998 71713 80694 64515 58945 61023 70014 TRUE FALSE 68116.15297 67214.80003 66150.26149 61524.04908 68897.18729 83764.86671 56044.103 66649.31389 66330.67024 67729.44891 1.005709541 0.992401402 0.976683888 0.908379591 1.017241221 1.236756951 0.827470235 0.98405221 0.979347556 1 16.04749564 LQEEMLQR ddPTM_A459_MK2206_30min_R2 1 LQEEMLQR 8 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 141.52 0.031482 7521000 26301 32946 26753 26530 29614 28651 25002 23080 22256 26745 FALSE TRUE 28314.62478 31309.94955 27644.93167 24362.41413 28451.20556 29741.33388 21719.20737 26096.63525 24191.78665 25872.31284 1.094398671 1.210172038 1.068514123 0.941640366 1.099677703 1.149542914 0.839476838 1.008670365 0.935045382 1 14.65912141 -5.721987915 0.451589333 0.956529606 1.199497467 0.314667096 0.087412951 2.833058398 0.821539577 0.075045879 0.340454395 1.90E-06 5.721987915 0.242967861 LQEKEDLQELNDR ddPTM_A459_MK2206_30min_R1 3 LQEKEDLQELNDR 13 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ;; 135.91 0.0031618 50164200 12230.4 13035.9 12987.3 12333.4 13984.2 11692.9 11947.1 11966.3 10533.1 8469 FALSE TRUE 11190.14026 12187.26054 12105.75826 13283.32061 13427.1797 12354.94189 11150.13076 11861.6799 11628.05344 9518.203658 1.175656737 1.28041603 1.27185325 1.395570118 1.41068422 1.298032942 1.171453266 1.246209929 1.221664702 1 13.21647361 -8.911688688 0.647314272 0.996633037 1.303489519 0.596428661 0.071210838 1.066992564 0.836178274 0.089694843 0.031690689 1.23E-09 8.911688688 0.306856482 LQEKEDLQELNDR ddPTM_A459_MK2206_30min_R2 3 LQEKEDLQELNDR 13 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ;; 125.84 0.005884 67588400 121710 179111 148319 179564 165039 157506 165382 134464 143353 144896 FALSE TRUE 131028.2112 170216.6082 153263.8814 164893.0468 158558.7396 163500.0012 143667.1447 152038.9065 155821.5848 140168.0554 0.934793672 1.214375185 1.093429462 1.176395337 1.131204533 1.166456942 1.024963529 1.084690132 1.111676868 1 17.09679807 -10.45339403 5.350805828 0.999999795 1.108984474 0.142303578 0.075953683 1.78E-07 3.56E-08 0.069890311 0.016950858 3.52E-11 10.45339403 0.108984678 LQEKLS(ph)PPYSSPQEFAQDVGR ddPTM_A459_MK2206_30min_R2 1 LQEKLSPPYSSPQEFAQDVGR 21 1 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 LQEKLS(0.998)PPY(0.001)S(0.001)SPQEFAQDVGR 55.871 0.017277 6936300 13928 15749 19149 21112 19362 16865 19383 17155 16657 19741 TRUE FALSE 14994.33839 14966.92756 19787.4181 19387.08207 18601.75059 17506.80939 16837.98882 19397.2174 18105.79575 19096.85279 0.785173272 0.783737914 1.036161211 1.015197754 0.974074147 0.916737935 0.88171538 1.015728488 0.948103646 1 14.22104728 -5.248563361 24.72841896 0.970236049 0.784455547 0.73548909 0.045306404 359.0340968 689522.191 0.012498986 0.032588055 5.64E-06 5.248563361 -0.185780501 LQELAS(ph)PPAGRPTPAPR ddPTM_A459_MK2206_30min_R2 1 LQELASPPAGRPTPAPR 17 1 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 LQELAS(0.813)PPAGRPT(0.187)PAPR 53.924 0.046263 11649000 16116 22448 19854 22367 22472 18641 23439 15882 15282 20819 TRUE FALSE 17349.85335 21333.26496 20515.92245 20539.54455 21589.63637 19350.39632 20361.43114 17957.83193 16611.20074 20139.67773 0.861476215 1.059265458 1.018681764 1.019854678 1.071995126 0.96080963 1.011010772 0.891664314 0.824799729 1 14.29775298 -7.762566457 24.98809048 0.893673984 1.005380299 0.282870901 0.068196143 32.12816543 712239.4136 0.033369457 0.017449666 1.73E-08 7.762566457 0.111706315 LQELASPPAGRPT(ph)PAPR ddPTM_A459_MK2206_30min_R2 1 LQELASPPAGRPTPAPR 17 1 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 LQELAS(0.123)PPAGRPT(0.877)PAPR 141.85 0.0051851 3972200 16699 23798 19672 23721 18036 23477 22027 17056 19811 19391 TRUE FALSE 17977.48828 22616.22593 20327.85466 21782.91842 17327.81602 24370.43369 19134.82844 19285.27776 21534.12497 18758.27326 0.9583765 1.205666727 1.083674088 1.161243262 0.923742595 1.299183211 1.020074086 1.02809451 1.14798013 1 14.19523941 -13.96348791 0.417754978 0.000212649 1.095835747 0.057666183 0.109346744 1678.834193 17.91331558 1515.402516 0.060528202 1.09E-14 13.96348791 1.095623098 LQELESCSGLGS(ph)TSDDTDVR ddPTM_A459_MK2206_30min_R1 3 LQELESCSGLGSTSDDTDVR 20 0 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08;B4DGD8 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 LQELESCS(0.001)GLGS(0.766)T(0.208)S(0.025)DDTDVR;LQELESCS(0.009)GLGS(0.87)T(0.06)S(0.06)DDTDVR;LQELESCS(0.024)GLGS(0.94)T(0.035)S(0.001)DDTDVR 235.85 3.29E-25 23822100 5583.3 5352.3 5155.11 4758.1 5180.3 4511.05 5404.23 4309.38 4048.47 4377.92 TRUE FALSE 5108.411016 5003.864297 4805.195496 5124.569686 4973.957682 4766.461753 5043.723677 4271.703545 4469.322944 4920.289781 1.038233771 1.01698569 0.97660823 1.041517861 1.010907467 0.968735982 1.025086713 0.868181293 0.908345472 1 12.26452757 -7.748810098 24.98536687 0.916197532 1.009576256 0.514320987 0.037793734 151.9273804 300569.5939 0.017224329 0.009857989 1.78E-08 7.748810098 0.093378723 LQELESCSGLGS(ph)TSDDTDVR ddPTM_A459_MK2206_30min_R2 3 LQELESCSGLGSTSDDTDVR 20 0 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08;B4DGD8 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 LQELESCSGLGS(0.712)T(0.219)S(0.068)DDTDVR;LQELES(0.001)CS(0.006)GLGS(0.917)T(0.059)S(0.015)DDTDVR;LQELESCS(0.002)GLGS(0.94)T(0.024)S(0.033)DDTDVR 120.52 0.00097915 0 11539.8 15454.6 11760.3 15024.2 13637.6 13645.4 11856.4 9571.5 8979.2 10759.2 TRUE FALSE 12423.29596 14687.14704 12152.38253 13796.6748 13102.1193 14164.68526 10299.64044 10822.52791 9760.194585 10408.12819 1.193614811 1.411122805 1.167585786 1.325567341 1.258835313 1.360925327 0.989576632 1.03981501 0.937747346 1 13.34542301 -7.269722986 24.99176585 0.995102641 1.287093882 0.801682437 0.071747395 253.4983189 764805.1973 0.027535141 0.018911636 5.37E-08 7.269722986 0.291991241 LQELESCSGLGST(ph)SDDTDVR ddPTM_A459_MK2206_30min_R1 1 LQELESCSGLGSTSDDTDVR 20 0 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08;B4DGD8 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 LQELESCSGLGS(0.259)T(0.664)S(0.077)DDTDVR 233.46 6.46E-24 3384900 567.78 533.2 655.37 633.01 660.9 671.59 656.04 608.69 546.5 558.19 TRUE FALSE 519.4873295 498.4885831 610.8853104 681.7645399 634.5749535 709.6148454 612.2767686 603.3682875 603.3106307 627.3427913 0.828075713 0.79460319 0.973766366 1.08674962 1.011528246 1.131143699 0.975984385 0.961784045 0.961692139 1 9.293110163 -5.348338641 4.125407575 1.019955519 0.810598596 0.709677948 0.052031627 0.117325531 3.605747438 0.014739724 0.033543663 4.48E-06 5.348338641 -0.209356923 LQELESCSGLGST(ph)SDDTDVR ddPTM_A459_MK2206_30min_R2 1 LQELESCSGLGSTSDDTDVR 20 0 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08;B4DGD8 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 LQELESCSGLGS(0.136)T(0.787)S(0.077)DDTDVR 176.44 1.04E-12 3599700 16077 16905 15179 20145 15059 16436 14766 10474 12064 14643 TRUE FALSE 17307.86748 16065.52228 15685.06028 18499.08906 14467.70799 17061.4835 12827.20646 11842.98776 13113.30491 14165.20011 1.221858311 1.134154277 1.107295355 1.305953246 1.021355709 1.2044647 0.905543611 0.836062157 0.925740887 1 13.79006336 -7.267699451 24.57418091 0.903175152 1.16154561 0.697808988 0.080046144 213.2407657 837081.6004 0.031504203 0.021838524 5.40E-08 7.267699451 0.258370458 LQELESCSGLGSTS(ph)DDTDVR ddPTM_A459_MK2206_30min_R2 2 LQELESCSGLGSTSDDTDVR 20 0 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08;B4DGD8 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 LQELESCS(0.005)GLGS(0.242)T(0.321)S(0.429)DDT(0.002)DVR;LQELES(0.002)CS(0.004)GLGS(0.03)T(0.044)S(0.919)DDT(0.001)DVR 89.028 0.0064054 0 8171.3 9785.7 10805.4 11420.6 9935.3 9666.5 11207.5 7784.7 8409 9899.4 TRUE FALSE 8796.901011 9299.756368 11165.64664 10487.50045 9545.190201 10034.36543 9735.941787 8802.187019 9140.39962 9576.383389 0.918603679 0.971113623 1.165956519 1.095142083 0.996742696 1.047824113 1.016661655 0.919155663 0.954473025 1 13.2252652 -7.615915655 5.678021184 0.953289779 1.036681503 0.202287388 0.065937801 0.329245232 16.19174433 0.034250814 0.019417462 2.42E-08 7.615915655 0.083391725 LQELNAHIVVS(ph)DPEDITDCPR ddPTM_A459_MK2206_30min_R1 4 LQELNAHIVVSDPEDITDCPR 21 0 Q16513-3;Q16513-2;Q16513;B1AL79 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 LQELNAHIVVS(0.994)DPEDIT(0.006)DCPR;LQELNAHIVVS(0.994)DPEDIT(0.006)DCPR;LQELNAHIVVS(0.961)DPEDIT(0.039)DCPR;LQELNAHIVVS(0.991)DPEDIT(0.009)DCPR 130.57 3.47E-05 26174700 7813.9 7782.4 8306.1 6892.3 9387.3 7529.8 8767 7978.3 6811.8 7184.4 TRUE FALSE 7149.286773 7275.764345 7742.305074 7423.14614 9013.383963 7956.130769 8182.169426 7908.546564 7519.910986 8074.457711 0.885420053 0.901083962 0.958863784 0.919336803 1.116283506 0.985345525 1.013339808 0.979452348 0.931320871 1 12.97914965 -6.071222202 24.99987269 1.004135737 0.917946567 0.458890237 0.046861315 146.6405243 51472.04087 0.014138871 0.018253214 8.49E-07 6.071222202 -0.08618917 LQEVPHEGPMCDLLWSDPDDR ddPTM_A459_MK2206_30min_R1 1 LQEVPHEGPMCDLLWSDPDDR 21 0 P67775;P62714;H0YC23;E5RHC1 P67775 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 0 102.15 0.0044457 6028400 1004.2 876.91 1116.6 988.72 1254.9 942.7 1394.7 1191 1029.6 1283 FALSE TRUE 918.7875167 819.8229996 1040.808303 1064.871386 1204.914676 996.0748593 1301.662108 1180.587213 1136.630604 1441.947726 0.637185038 0.56855251 0.721807236 0.738495138 0.835616059 0.690784306 0.902711024 0.818744807 0.788260617 1 10.49380315 -3.441990227 0.131108512 1.053281033 5.47E-14 0.731096677 0.062515464 25.82200927 0.376194937 0.39335419 4.76720294 0.000361418 3.441990227 -1.053281033 LQFHDVAGDIFHQQCK ddPTM_A459_MK2206_30min_R1 2 LQFHDVAGDIFHQQCK 16 0 P11413-3;P11413;P11413-2 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 167.37 8.37E-06 84089000 19476.2 19482.3 19014.7 18001.9 20879 17667 19470.6 18134.8 17103.9 16660.1 FALSE TRUE 17819.64692 18213.99873 17724.03514 19388.40946 20047.34522 18667.29027 18171.7518 17976.24936 18881.91161 18724.07897 0.951696847 0.97275806 0.946590493 1.035480009 1.070671901 0.996967077 0.970501771 0.96006054 1.008429394 1 14.19260713 -5.746979352 24.91610362 1.005188893 0.958589416 0.359990877 0.029904182 307.083342 529131.121 0.009325972 0.016064162 1.79E-06 5.746979352 -0.046599477 LQGQVS(ph)AK ddPTM_A459_MK2206_30min_R2 1 LQGQVSAK 8 0 O95235-2;O95235 O95235-2 KIF20A Kinesin-like protein KIF20A 1 LQGQVS(1)AK 82.261 0.041744 6026200 28901 30608 25251 24206 27805 25336 23452 21570 17508 26211 TRUE FALSE 31113.68278 29088.05123 26092.85574 22228.29237 26713.23599 26300.17923 20372.72423 24389.27306 19030.81419 25355.73722 1.227086498 1.147198008 1.029071074 0.87665731 1.053538131 1.037247665 0.803475918 0.961883808 0.750552588 1 14.6300246 -2.404574734 0.414064017 0.893267458 3.844958003 0.564657985 0.092033373 26.45478792 0.698872111 0.064197034 57.86167866 0.003939356 2.404574734 2.951690545 LQHSTS(ph)ILR ddPTM_A459_MK2206_30min_R2 3 LQHSTSILR 9 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;A0A2R8Y695 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 LQHS(0.001)T(0.111)S(0.888)ILR;LQHST(0.068)S(0.932)ILR;LQHS(0.001)T(0.127)S(0.872)ILR 109.16 0.0076683 10107600 37942.2 53512 43537 55203 61522 65510 54097 45643 54104 47416 TRUE FALSE 40847.084 50854.67189 44988.50185 50692.73831 59106.33716 68003.02896 46993.99892 51608.69682 58809.86812 45868.8198 0.890519621 1.108698068 0.980807922 1.105167705 1.288595116 1.482554582 1.02453037 1.125136793 1.282131705 1 15.48522617 -5.996094505 4.365786767 1.211776018 1.007290357 0.301449612 0.140180291 0.259935915 12.29151398 0.042030262 0.060452062 1.01E-06 5.996094505 -0.204485661 LQINS(ph)PPFDQPMSR ddPTM_A459_MK2206_30min_R1 2 LQINSPPFDQPMSR 14 0 Q00537-2;F5H6Z0;Q00537;F8VQZ9 Q00537-2 CDK17 Cyclin-dependent kinase 17 1 LQINS(1)PPFDQPMSR;LQINS(1)PPFDQPMSR 125.47 0.0013769 11967300 4089.5 4454.3 4776.5 4101.9 4896.2 5108 4742.1 4771.2 3092.4 3438.7 TRUE FALSE 3741.66655 4164.32426 4452.284488 4417.829049 4701.173986 5397.210546 4425.763161 4729.485901 3413.866046 3864.712117 0.968161777 1.077525087 1.152035224 1.143119828 1.216435751 1.396536244 1.145172791 1.223761501 0.88334291 1 11.91614524 -8.260748848 24.99522606 0.941671441 1.169968987 0.411740441 0.106826656 62.09652438 2247936.428 0.088896053 0.029006617 5.49E-09 8.260748848 0.228297546 LQINS(ph)PPFDQPMSR ddPTM_A459_MK2206_30min_R2 4 LQINSPPFDQPMSR 14 0 Q00537-2;F5H6Z0;Q00537;F8VQZ9 Q00537-2 CDK17 Cyclin-dependent kinase 17 1 LQINS(1)PPFDQPMSR;LQINS(0.99)PPFDQPMS(0.01)R;LQINS(1)PPFDQPMSR;LQINS(0.981)PPFDQPMS(0.019)R 143.56 0.00053694 20057100 72504.6 82727.7 77362.3 84685 99517 77883.5 99913.7 71334.8 69741 88952 TRUE FALSE 78055.60792 78619.56272 79941.52047 77765.96461 95609.46255 80847.41117 86794.91117 80658.50329 75806.94612 86049.50352 0.9071012 0.913655042 0.9290178 0.903735192 1.111098364 0.939545353 1.008662544 0.937350013 0.880969012 1 16.39287925 LQINSPPFDQPMS(ph)R ddPTM_A459_MK2206_30min_R1 1 LQINSPPFDQPMSR 14 0 Q00537-2;F5H6Z0;Q00537;F8VQZ9 Q00537-2 CDK17 Cyclin-dependent kinase 17 1 LQINSPPFDQPMS(1)R 115.57 0.010535 4071300 2022.8 2111.4 2313.6 1871.2 2331.1 2039 2125.8 1992.4 1769.4 1632.1 TRUE FALSE 1850.750238 1973.947476 2156.559278 2015.320148 2238.247351 2154.446418 1983.991761 1974.980657 1953.335462 1834.29687 1.00896985 1.076133045 1.17568716 1.098688103 1.220220886 1.174535297 1.081608868 1.076696302 1.064896034 1 10.84101143 -8.272494098 1.182807185 1.006599491 1.125875515 0.301241661 0.057098517 0.58929322 1.658264441 0.057551683 0.018708678 5.34E-09 8.272494098 0.119276024 LQLEETMPS(ph)PYGR ddPTM_A459_MK2206_30min_R2 1 LQLEETMPSPYGR 13 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 LQLEETMPS(1)PYGR 113.37 0.0045921 4631700 6669.6 7097.6 7950.3 9924.4 8768.4 10260 10544 9139.7 7687 6423.6 TRUE FALSE 7180.229704 6745.143505 8215.359034 9113.544773 8424.108558 10650.45149 9159.560134 10334.29017 8355.601365 6213.998458 1.155492676 1.085475568 1.322072912 1.466615229 1.355666342 1.713944984 1.474020342 1.663066098 1.344641686 1 12.60130617 -5.489692502 2.466904032 1.470772814 1.116135093 0.283314596 0.187384908 0.307528295 3.671619521 0.05021908 0.121177005 3.24E-06 5.489692502 -0.354637721 LQLERPVS(ph)PETQADLQR ddPTM_A459_MK2206_30min_R1 4 LQLERPVSPETQADLQR 17 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 LQLERPVS(0.962)PET(0.038)QADLQR;LQLERPVS(0.776)PET(0.224)QADLQR;LQLERPVS(0.934)PET(0.066)QADLQR;LQLERPVS(0.993)PET(0.007)QADLQR 127.53 0.0008039 127019000 7730.91 7702.2 7307.98 5126.67 6535.72 6910.74 8788.57 6656.82 7750.35 7893.98 TRUE FALSE 7073.355508 7200.78538 6811.934679 5521.527012 6275.388433 7302.020127 8202.300531 6598.620125 8556.026617 8871.945839 0.79727217 0.811635408 0.767806161 0.622358061 0.707329434 0.823046067 0.924521033 0.743762444 0.964391214 1 13.11503484 -6.970222741 4.446138489 0.886023102 0.740752979 0.47902418 0.080672086 0.209124942 9.719421013 0.03073073 0.026092714 1.07E-07 6.970222741 -0.145270123 LQLERPVS(ph)PETQADLQR ddPTM_A459_MK2206_30min_R2 3 LQLERPVSPETQADLQR 17 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 LQLERPVS(0.87)PET(0.13)QADLQR;LQLERPVS(0.632)PET(0.368)QADLQR;LQLERPVS(0.928)PET(0.072)QADLQR 104.81 0.001496 192354000 108943 129160 140406 139143 108299 142158 151830 112102 107716 137118 TRUE FALSE 117283.7598 122746.1022 145087.066 127774.5718 104046.6371 147567.9223 131894.5386 126754.1163 117084.943 132643.8509 0.884200504 0.925381021 1.093809212 0.963290578 0.784406035 1.11251235 0.994350946 0.955597379 0.882701627 1 17.01719827 -5.99596522 24.99871775 0.954493738 0.974387724 0.002447351 0.093547493 1038.126393 6431908.187 0.027314015 0.040340377 1.01E-06 5.99596522 0.019893986 LQLERPVSPET(ph)QADLQR ddPTM_A459_MK2206_30min_R2 1 LQLERPVSPETQADLQR 17 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 LQLERPVS(0.298)PET(0.702)QADLQR 70.02 0.045606 11008000 17980 20438 18855 18409 16935 21784 19439 21227 22631 17269 TRUE FALSE 19356.56262 19423.07864 19483.61629 16904.92581 16270.04681 22613.00538 16886.63595 24001.44178 24599.40347 16705.51394 1.158693033 1.162674714 1.166298526 1.011936889 0.97393273 1.353625244 1.010842049 1.436737706 1.472531977 1 14.02803675 -7.763955155 24.99993127 1.340976136 1.122402986 0.211000254 0.157405016 85.02650215 844894.1214 0.078347621 0.040385252 1.72E-08 7.763955155 -0.21857315 LQLGT(ph)PPPLLAAR ddPTM_A459_MK2206_30min_R1 1 LQLGTPPPLLAAR 13 0 Q9P2N5 Q9P2N5 RBM27 RNA-binding protein 27 1 LQLGT(1)PPPLLAAR 137.73 0.0023987 13755000 4173 3769.3 3722.5 3022.9 4154.9 3345.5 4110.8 3449.3 3175.2 2422.1 TRUE FALSE 3818.064437 3523.917885 3469.827071 3255.724282 3989.401535 3534.919319 3836.576033 3419.143134 3505.273403 2722.168034 1.402582203 1.294526216 1.274655726 1.196004156 1.465523614 1.29856764 1.409382516 1.256036766 1.287677086 1 11.41054041 -9.081006843 1.204201764 0.999899206 1.326139169 0.621311546 0.07590274 1.708508228 3.069961436 0.072913169 0.021944279 8.30E-10 9.081006843 0.326239963 LQLQGLDLS(ph)SR ddPTM_A459_MK2206_30min_R2 1 LQLQGLDLSSR 11 0 P49454 P49454 CENPF Centromere protein F 1 LQLQGLDLS(0.514)S(0.486)R 126.09 0.0032258 2822100 8891.3 12296 9345.1 12642 10506 13152 10516 9239.6 10501 10498 TRUE FALSE 9572.024764 11685.39852 9656.66097 11609.10816 10093.48165 13652.50858 9135.236568 10447.24744 11414.358 10155.45112 0.942550425 1.150652825 0.950884491 1.143140568 0.993897911 1.344352744 0.899540204 1.028732975 1.123963659 1 13.30996671 -1.567628054 20.10888684 1.062343031 0.005318206 0 0.126740878 0 0 0.027173977 0 0.027062751 1.567628054 -1.057024825 LQLQGLDLSS(ph)R ddPTM_A459_MK2206_30min_R2 1 LQLQGLDLSSR 11 0 P49454 P49454 CENPF Centromere protein F 1 LQLQGLDLS(0.024)S(0.976)R 201.09 1.88E-05 3130800 14618 15338 12130 15928 15291 19533 15859 11829 13400 16396 TRUE FALSE 15737.16532 14576.33722 12534.40815 14626.63145 14690.59851 20276.342 13776.69425 13375.09092 14565.50778 15860.99986 0.992192513 0.91900494 0.790265951 0.922175876 0.926208854 1.278377289 0.868589267 0.84326909 0.918322168 1 13.9531961 -4.747319464 23.09198409 0.938360217 0.992192789 0.014727239 0.12507559 1853.717231 3031128.256 0.032779003 0.601918274 1.79E-05 4.747319464 0.053832571 LQLS(ph)PWESSVVNR ddPTM_A459_MK2206_30min_R2 3 LQLSPWESSVVNR 13 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LQLS(0.998)PWES(0.002)SVVNR;LQLS(0.997)PWES(0.003)SVVNR;LQLS(0.998)PWES(0.002)SVVNR 186.29 0.00010683 15654300 59224 52547 48365 55859 47292 50183 56021 43917 37290.9 52164 TRUE FALSE 63758.23498 49937.59239 49977.46496 51295.14102 45435.07846 52092.74923 48665.37541 49657.10269 40534.39508 50461.89295 1.263492732 0.98960997 0.990400122 1.016512422 0.900383949 1.032318571 0.96439853 0.984051525 0.80326743 1 15.62290671 LQLSPWESS(ph)VVNR ddPTM_A459_MK2206_30min_R2 1 LQLSPWESSVVNR 13 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LQLS(0.14)PWES(0.2)S(0.66)VVNR 134.02 0.0012636 3174800 16668 14082 16937 17760 16263 15008 17468 12862 16420 15031 TRUE FALSE 17944.1149 13382.70836 17501.67113 16308.95119 15624.4329 15579.13996 15174.43062 14543.10756 17848.18192 14540.5397 1.234074887 0.920372189 1.203646597 1.121619384 1.074542845 1.071427903 1.043594731 1.0001766 1.227477266 1 13.8277932 -6.350988107 5.185863966 1.067749505 1.111518453 0.057493756 0.097688173 0.860009043 37.82057743 0.029430111 0.033561749 4.46E-07 6.350988107 0.043768948 LQMAIEAS(ph)AES(ph)LAS(ph)LQRQIT(ph)SVAK ddPTM_A459_MK2206_30min_R2 1 LQMAIEASAESLASLQRQITSVAK 24 1 P60507 P60507 ERVFC1 Endogenous retrovirus group FC1 Env polyprotein;Surface protein;Transmembrane protein 4 LQMAIEAS(0.999)AES(0.999)LAS(0.699)LQRQIT(0.651)S(0.651)VAK 45.369 0.047068 0 13541 14820 10912 14568 16575 15195 16880 10570 12084 15117 TRUE FALSE 14577.70937 14084.06035 11275.80063 13377.7478 15924.18222 15773.25637 14663.63572 11951.53529 13135.04448 14623.73353 0.996852777 0.963096074 0.771061686 0.914797016 1.088927269 1.07860666 1.002728592 0.817269767 0.89820048 1 13.83602407 -4.868851282 5.505282821 0.945541315 0.994668289 0.023259128 0.097309688 1.040958583 43.37938139 0.02705724 0.119609407 1.35E-05 4.868851282 0.049126974 LQMEAPHIIVGTPGR ddPTM_A459_MK2206_30min_R1 1 LQMEAPHIIVGTPGR 15 0 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;J3KSZ0;J3QR64;J3QLN6;J3KS25;J3QKZ9 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 101.08 0.010084 12559000 7434.6 7948.2 7904.4 7215.2 8241.6 7292.5 7937.5 6970.7 6318.7 5668.5 FALSE TRUE 6802.248229 7430.770735 7367.871351 7770.915954 7913.31962 7705.395048 7408.003858 6909.755905 6975.551477 6370.756575 1.067730049 1.166387484 1.156514342 1.219779137 1.242131845 1.209494502 1.162813831 1.084605231 1.094932979 1 12.637249 -8.20449557 1.213368559 1.01181136 1.180583228 0.570347371 0.047735448 0.337881988 0.961465663 0.047953035 0.015677482 6.24E-09 8.20449557 0.168771868 LQMEAPHIIVGTPGR ddPTM_A459_MK2206_30min_R2 2 LQMEAPHIIVGTPGR 15 0 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;J3KSZ0;J3QR64;J3QLN6;J3KS25;J3QKZ9 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 ; 127.3 0.0015015 12289600 56762 75113 62635 83136 75201 75671 70978 62460 67935 69907 FALSE TRUE 61107.74236 71382.99764 64723.21964 76343.52286 72248.23089 78550.71293 61658.50334 70623.73646 73843.8635 67625.94032 0.90361394 1.055556452 0.957076816 1.128908855 1.068350851 1.161547071 0.911758166 1.044329086 1.09194583 1 16.04528913 -3.923789556 1.338359615 1.051879005 4.55E-11 0.253434617 0.071966391 16.22064539 4.544745311 0.020613393 40.09525074 0.000119182 3.923789556 -1.051879005 LQMPS(ph)FK ddPTM_A459_MK2206_30min_R2 1 LQMPSFK 7 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 LQMPS(1)FK 109.44 0.015842 10691000 37482 53005 34599 32271 21283 23296 32749 26942 26387 27638 TRUE FALSE 40351.65074 50372.84878 35752.51339 29634.35607 20447.32248 24182.5456 28449.01696 30463.41191 28682.09356 26736.17432 1.509252979 1.884070928 1.337233703 1.108399269 0.764781163 0.904487879 1.064064612 1.139408037 1.072782262 1 14.70650542 -5.582002765 2.680649786 0.997350657 1.694290634 0.808441423 0.134277257 0.110565404 1.595867455 0.039735542 0.083505227 2.62E-06 5.582002765 0.696939976 LQNAT(ph)PTNFK ddPTM_A459_MK2206_30min_R2 1 LQNATPTNFK 10 0 Q9NXF1-2;Q9NXF1 Q9NXF1-2 TEX10 Testis-expressed sequence 10 protein 1 LQNAT(0.52)PT(0.48)NFK 100.38 0.040906 9444100 68322 67075 69671 82866 70853 62226 76565 63463 58510 83989 TRUE FALSE 73552.78485 63744.15304 71993.79637 76095.58272 68070.95521 64594.05403 66511.92353 71757.832 63599.09404 81248.44581 0.905282361 0.784558429 0.886094443 0.936578934 0.837812398 0.795018949 0.818623949 0.883190211 0.782773054 1 16.3100526 -10.78026466 4.54500009 1.000064075 0.847990456 0.446346365 0.050862672 3.33E-05 5.44E-06 0.049673511 0.012042525 1.66E-11 10.78026466 -0.152073619 LQNATPT(ph)NFK ddPTM_A459_MK2206_30min_R2 1 LQNATPTNFK 10 0 Q9NXF1-2;Q9NXF1 Q9NXF1-2 TEX10 Testis-expressed sequence 10 protein 1 LQNAT(0.121)PT(0.879)NFK 99.215 0.043806 9715400 51299 58204 38702 51576 49273 48425 39148 31877 36406 49280 TRUE FALSE 55226.49088 55313.674 39992.30536 47362.07582 47338.29444 50267.84731 34007.82057 36043.43335 39572.52807 47671.99764 1.158468149 1.160296961 0.838905591 0.993498871 0.993000017 1.054452295 0.713370999 0.756071387 0.830100059 1 15.54085446 -7.251159442 24.73928242 0.804558226 1.026434877 0.453607503 0.110915596 547.5041708 1317603.715 0.04395075 0.033649101 5.61E-08 7.251159442 0.221876651 LQPGPLPS(ph)PTVHVTEL ddPTM_A459_MK2206_30min_R2 1 LQPGPLPSPTVHVTEL 16 0 A6NIX2 A6NIX2 WTIP Wilms tumor protein 1-interacting protein 1 LQPGPLPS(0.5)PT(0.5)VHVTEL 91.441 0.021418 0 6288.4 10912 7370.5 9294.5 8057.2 8403.9 5637.5 5129.2 6491.7 5977.6 TRUE FALSE 6769.844739 10370.12595 7616.228791 8535.109618 7740.833844 8723.716303 4897.289478 5799.604051 7056.336332 5782.551402 1.17073663 1.79334782 1.317105247 1.476011024 1.338653703 1.508627541 0.846908075 1.002948984 1.220280779 1 12.49749047 -7.25262787 24.85223884 1.017780206 1.442662 0.581231255 0.173121261 403.1925385 1137178.1 0.063847817 0.048679604 5.59E-08 7.25262787 0.424881794 LQPGPLPSPT(ph)VHVTEL ddPTM_A459_MK2206_30min_R2 1 LQPGPLPSPTVHVTEL 16 0 A6NIX2 A6NIX2 WTIP Wilms tumor protein 1-interacting protein 1 LQPGPLPS(0.246)PT(0.753)VHVTEL 117.48 0.0035014 0 5758.3 11074 6103.6 8959 8812.8 7676.9 8226.2 5418 5854.8 5684.8 TRUE FALSE 6199.159875 10524.08126 6307.090978 8227.021042 8466.765191 7969.049809 7146.090059 6126.151203 6364.039921 5499.305442 1.127262332 1.91371099 1.146888647 1.496010929 1.53960628 1.449101144 1.299453201 1.113986351 1.157244308 1 12.4250337 -7.591785981 1.963543431 1.083282865 1.461534152 0.36661484 0.208606328 0.357092588 2.722506786 0.124412054 0.059538128 2.56E-08 7.591785981 0.378251287 LQPLS(ph)PVPSDIEISR ddPTM_A459_MK2206_30min_R1 1 LQPLSPVPSDIEISR 15 0 H0Y327;A0A087WVM4;B7ZM99;Q6UB35 H0Y327 MTHFD1L "Monofunctional C1-tetrahydrofolate synthase, mitochondrial" 1 LQPLS(0.997)PVPS(0.003)DIEISR 181.69 2.05E-05 2729400 1026.3 869.65 1043.2 715.01 744.94 858.03 935.55 831.25 888.92 608.53 TRUE FALSE 939.0077957 813.0356269 972.3904905 770.0801941 715.2674624 906.6109171 873.1411665 823.9824689 981.326415 683.9192906 1.372980421 1.18878885 1.42179129 1.125981099 1.045836069 1.325610974 1.276672816 1.204794894 1.434857049 1 9.417682272 -5.768921803 24.99960115 1.212257242 1.313947058 0.152522473 0.133258189 387.5330485 1294794.29 0.037208273 0.056463101 1.70E-06 5.768921803 0.101689816 LQPQEIS(ph)PPPTANLDR ddPTM_A459_MK2206_30min_R1 4 LQPQEISPPPTANLDR 16 0 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;H0YBZ1;H0YB16;Q05397-6;B4DWJ1;E9PEI4 E7ESA6;E9PEI4 PTK2 Focal adhesion kinase 1 1 LQPQEIS(0.996)PPPT(0.004)ANLDR;LQPQEIS(0.924)PPPT(0.076)ANLDR;LQPQEIS(0.987)PPPT(0.013)ANLDR;LQPQEIS(0.998)PPPT(0.002)ANLDR 149.86 0.00024685 163433000 5645.4 5568 5846.4 4482.08 6460.8 5830.1 5511.6 5333.3 4979.46 4118.44 TRUE FALSE 5165.229085 5205.522188 5449.562657 4827.290578 6203.452655 6160.195224 5143.93122 5286.67152 5497.092686 4628.66344 1.115922372 1.124627499 1.177351244 1.042912418 1.340225475 1.330879919 1.111321073 1.142159414 1.187619873 1 12.17637995 -9.900344111 0.942531615 0.994784947 1.177361849 0.253826395 0.089713489 32.92700349 19.86052242 0.768266327 0.029986163 1.26E-10 9.900344111 0.182576902 LQPQEIS(ph)PPPTANLDR ddPTM_A459_MK2206_30min_R2 4 LQPQEISPPPTANLDR 16 0 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;H0YBZ1;H0YB16;Q05397-6;B4DWJ1;E9PEI4 E7ESA6;E9PEI4 PTK2 Focal adhesion kinase 1 1 LQPQEIS(0.997)PPPT(0.003)ANLDR;LQPQEIS(0.999)PPPT(0.001)ANLDR;LQPQEIS(0.959)PPPT(0.041)ANLDR;LQPQEIS(0.822)PPPT(0.178)ANLDR 178.57 1.11E-06 195513200 66167.5 85404 74230 79128 76476 79748 76679 66157.7 61312.7 71949 TRUE FALSE 71233.33467 81162.96155 76704.79115 72662.98928 73473.16798 82782.86602 66610.95519 74804.73854 66645.56782 69601.31002 1.023448189 1.166112556 1.102059589 1.043988817 1.055629096 1.189386608 0.95703594 1.074760497 0.957533239 1 16.08682684 -7.280928275 24.9997027 1.003562462 1.095893855 0.419344329 0.057130205 888.1425283 1139274.793 0.023200634 0.015670172 5.24E-08 7.280928275 0.092331392 LQPSS(ph)SPENSLDPFPPR ddPTM_A459_MK2206_30min_R1 3 LQPSSSPENSLDPFPPR 17 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 LQPS(0.358)S(0.474)S(0.168)PENSLDPFPPR;LQPS(0.21)S(0.708)S(0.082)PENSLDPFPPR;LQPS(0.004)S(0.498)S(0.498)PENSLDPFPPR 233.48 9.73E-17 123127600 6852.16 6945.34 7486.93 6246.85 7561.2 7334.88 7360.61 6357.14 5614.75 5677.61 TRUE FALSE 6269.34781 6493.197104 6978.738051 6727.983469 7260.021393 7750.174567 6869.597137 6301.560195 6198.423355 6380.995191 0.98250314 1.017583764 1.093675492 1.054378395 1.137756913 1.214571448 1.076571433 0.987551316 0.971388188 1 12.63956573 -7.750099084 5.656378003 0.983648713 1.086940998 0.348489293 0.060118481 0.198706189 20.54795867 0.034658654 0.018246575 1.78E-08 7.750099084 0.103292286 LQPSS(ph)SPENSLDPFPPR ddPTM_A459_MK2206_30min_R2 3 LQPSSSPENSLDPFPPR 17 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 LQPS(0.434)S(0.512)S(0.054)PENSLDPFPPR;LQPS(0.127)S(0.436)S(0.436)PENSLDPFPPR;LQPS(0.166)S(0.721)S(0.112)PENS(0.001)LDPFPPR 305.64 7.94E-90 100307200 303462 355909 314349 407927 337675 367654 378702 283016 332774 355832 TRUE FALSE 326695.284 338235.0766 324829.2388 374598.0592 324416.1828 381645.3306 328977.9725 320007.1629 361718.081 344221.231 0.949085224 0.982609572 0.94366416 1.08824798 0.942464188 1.108721067 0.955716681 0.929655507 1.050830246 1 18.39297656 LQPSSS(ph)PENSLDPFPPR ddPTM_A459_MK2206_30min_R1 2 LQPSSSPENSLDPFPPR 17 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 LQPS(0.244)S(0.074)S(0.657)PENS(0.025)LDPFPPR;LQPS(0.024)S(0.082)S(0.867)PENS(0.028)LDPFPPR 236.31 2.28E-22 115286000 5800.71 5712.38 5966.68 4650.17 6242.31 5173.49 5748.13 4973.9 4724.29 4285.08 TRUE FALSE 5307.329154 5340.503024 5561.678386 5008.326899 5993.665574 5466.408533 5364.682736 4930.413717 5215.396852 4815.948061 1.102032058 1.108920394 1.154846006 1.039946203 1.24454531 1.135063847 1.113941153 1.023768042 1.082942919 1 12.23360412 -7.669842686 4.755483559 1.04016131 1.131384598 0.40379179 0.051862683 0.219915669 8.515417598 0.025548774 0.01407561 2.14E-08 7.669842686 0.091223288 LQPSSS(ph)PENSLDPFPPR ddPTM_A459_MK2206_30min_R2 4 LQPSSSPENSLDPFPPR 17 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 LQPS(0.018)S(0.066)S(0.916)PENSLDPFPPR;LQPS(0.003)S(0.023)S(0.973)PENSLDPFPPR;LQPS(0.068)S(0.217)S(0.702)PENS(0.013)LDPFPPR;LQPS(0.006)S(0.019)S(0.909)PENS(0.066)LDPFPPR 195.6 6.85E-08 89992900 230837.9 258925.1 239376.5 278304.2 260874.4 297641.9 294171.9 228635.6 250138.8 259774.1 TRUE FALSE 248511.0271 246067.256 247357.193 255565.8566 250631.1603 308968.8711 255546.7762 258519.0579 271895.4207 251297.6924 0.9889109 0.979186294 0.984319397 1.016984494 0.997347639 1.229493467 1.016908567 1.028736299 1.081965449 1 17.9390379 -6.572331553 24.9999999 1.074655411 0.992876004 0.297499942 0.059918711 138.7742899 70153.9161 0.019659532 0.019659536 2.68E-07 6.572331553 -0.081779407 LQPSSSPENS(ph)LDPFPPR ddPTM_A459_MK2206_30min_R2 1 LQPSSSPENSLDPFPPR 17 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 LQPS(0.004)S(0.012)S(0.282)PENS(0.702)LDPFPPR 109.35 0.003225 0 5937.4 6893.9 6111.7 7755.4 4829.9 7794.8 4297.4 4173.5 5493.3 4585.2 TRUE FALSE 6391.971909 6551.558951 6315.461028 7121.759012 4640.253858 8091.436576 3733.146218 4718.99078 5971.097304 4435.5853 1.441066168 1.477044969 1.423816836 1.605596225 1.046142402 1.82420944 0.841635538 1.063893593 1.346180245 1 12.11490877 -7.27490694 24.9991582 1.068251825 1.454828585 0.461747512 0.214736769 747.705154 1387922.274 0.085342511 0.057895367 5.31E-08 7.27490694 0.38657676 LQQELDDLTVDLDHQR ddPTM_A459_MK2206_30min_R1 1 LQQELDDLTVDLDHQR 16 0 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 0 239.33 1.61E-64 0 993.49 810.1 813.22 703.76 817.1 812.03 819 868.58 680.4 709.01 FALSE TRUE 908.9884585 757.3623428 758.0208922 757.9637171 784.5531768 858.0064369 764.3660043 860.9860966 751.1300148 796.8475116 1.140730749 0.950448275 0.951274718 0.951202967 0.984571283 1.076751103 0.959237487 1.080490413 0.942627045 1 9.63815986 LQQGAGLES(ph)PQGQPEPGAAS(ph)PQR ddPTM_A459_MK2206_30min_R1 2 LQQGAGLESPQGQPEPGAASPQR 23 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 LQQGAGLES(1)PQGQPEPGAAS(1)PQR;LQQGAGLES(1)PQGQPEPGAAS(1)PQR 155.68 8.67E-09 19987900 3301.6 3230.2 3532.6 3307.9 3363.2 3772.9 3452.6 3283.3 2858.5 2496.5 TRUE FALSE 3020.781583 3019.913393 3292.816954 3562.675031 3229.236622 3986.518338 3222.283354 3254.594454 3155.651304 2805.785268 1.076626076 1.076316648 1.17358124 1.269760403 1.150920799 1.420820896 1.148442609 1.159958494 1.124694516 1 11.45418889 -8.633590973 1.471895556 1.001201275 1.1915709 0.264203534 0.094463915 0.796379216 3.634052801 0.095240492 0.028005663 2.32E-09 8.633590973 0.190369625 LQQGAGLES(ph)PQGQPEPGAAS(ph)PQR ddPTM_A459_MK2206_30min_R2 2 LQQGAGLESPQGQPEPGAASPQR 23 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 LQQGAGLES(1)PQGQPEPGAAS(1)PQR;LQQGAGLES(1)PQGQPEPGAAS(1)PQR 141.3 9.04E-06 54077000 47948 51452 49036 56293 58387 60299 52160 45337 50971 49838 TRUE FALSE 51618.93575 48896.9685 50670.83577 51693.68183 56094.43301 62593.7207 45311.32934 51262.70157 55404.36545 48211.79014 1.070670382 1.014211842 1.051005068 1.072220751 1.163500315 1.298307333 0.939839181 1.063281438 1.149187062 1 15.55709838 -3.468694671 15.77154371 1.085251001 0.756473308 0 0.09544658 0 0 0.022460696 0 0.000339864 3.468694671 -0.328777693 LQQGAGLESPQGQPEPGAAS(ph)PQR ddPTM_A459_MK2206_30min_R1 3 LQQGAGLESPQGQPEPGAASPQR 23 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LQQGAGLES(0.002)PQGQPEPGAAS(0.998)PQR;LQQGAGLES(0.002)PQGQPEPGAAS(0.998)PQR;LQQGAGLESPQGQPEPGAAS(1)PQR 124.07 6.89E-06 109684000 9616 11719.2 12214.4 9644.8 10725.8 9948.4 10515.9 10148.4 10447.1 9589 TRUE FALSE 8798.108704 10956.27795 11385.32056 10387.64417 10298.56867 10511.66981 9814.403498 10059.67361 11533.11343 10776.95771 0.816381482 1.016639226 1.056450332 0.963875376 0.955610011 0.975383786 0.91068405 0.933442802 1.070164117 1 13.39566235 LQQGAGLESPQGQPEPGAAS(ph)PQR ddPTM_A459_MK2206_30min_R2 2 LQQGAGLESPQGQPEPGAASPQR 23 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LQQGAGLES(0.005)PQGQPEPGAAS(0.995)PQR;LQQGAGLESPQGQPEPGAAS(1)PQR 99.774 3.40E-05 143100000 226183 282180 252290 289190 306730 268500 278440 221389 205926 296340 TRUE FALSE 243499.7444 268167.3515 260701.2227 265562.2519 294686.239 278717.9556 241880.4935 250325.3024 223837.0713 286670.4501 0.849406503 0.935455159 0.909410867 0.926367722 1.027961685 0.972259107 0.843758028 0.873216275 0.780816688 1 18.12903367 -10.1000916 5.106958159 1.000000001 0.907187793 0.15878125 0.066691977 97125246.96 318623575.5 11.3016905 0.017911713 7.94E-11 10.1000916 -0.092812208 LQQQAALS(ph)PTTAPAVSSVSK ddPTM_A459_MK2206_30min_R1 2 LQQQAALSPTTAPAVSSVSK 20 0 A0A0U1RRM1;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LQQQAALS(0.494)PT(0.404)T(0.102)APAVSSVSK;LQQQAALS(0.451)PT(0.32)T(0.229)APAVSSVSK 214.05 2.61E-17 25646000 8095.2 7782.7 7989.1 6816.1 7677.4 6611.6 7765 7277.7 6407.2 6245.3 TRUE FALSE 7406.66073 7276.044815 7446.822151 7341.077203 7371.592901 6985.943078 7247.011018 7214.071836 7073.251368 7019.014914 1.055227952 1.036619085 1.060949755 1.045884258 1.050231833 0.995288251 1.032482636 1.027789786 1.007727075 1 12.77705285 -6.738469031 24.96917285 1.015633481 1.049455112 0.694485344 0.01223146 140.6964401 152939.0597 0.003948067 0.003945629 1.83E-07 6.738469031 0.033821631 LQQQAALS(ph)PTTAPAVSSVSK ddPTM_A459_MK2206_30min_R2 4 LQQQAALSPTTAPAVSSVSK 20 0 A0A0U1RRM1;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LQQQAALS(0.578)PT(0.314)T(0.109)APAVSSVSK;LQQQAALS(0.528)PT(0.36)T(0.111)APAVSSVSK;LQQQAALS(0.426)PT(0.426)T(0.148)APAVSSVSK;LQQQAALS(0.826)PT(0.161)T(0.013)APAVSSVSK 196.75 1.57E-15 60289700 280204 304443 271494 310650 299334 280884 325903 249385 257582 302370 TRUE FALSE 301656.6337 289324.8033 280545.4745 285268.9013 287580.6431 291573.2374 283111.5446 281980.4758 279986.0168 292503.6917 1.031291715 0.989132143 0.959117722 0.975265986 0.983169277 0.996819 0.967890501 0.964023648 0.95720507 1 18.15809531 -4.808343292 3.352714764 0.974847905 1.037031813 0.593081186 0.01387336 0.201866335 3.681187469 0.003607196 0.031369037 1.55E-05 4.808343292 0.062183908 LQQQHSEQPPLQPS(ph)PVMTR ddPTM_A459_MK2206_30min_R2 4 LQQQHSEQPPLQPSPVMTR 19 0 A0A0A0MSK5;J3KN66;Q5JTV8;Q5JTV8-3;Q5JTV8-2;H0YDU3 A0A0A0MSK5 TOR1AIP1 Torsin-1A-interacting protein 1 1 LQQQHSEQPPLQPS(0.989)PVMT(0.011)R;LQQQHSEQPPLQPS(0.787)PVMT(0.213)R;LQQQHSEQPPLQPS(0.827)PVMT(0.173)R;LQQQHSEQPPLQPS(0.984)PVMT(0.016)R 140.2 0.00022279 94260000 226391 170459 195734 158594 149728 175894 237335 145446 166916 190607 TRUE FALSE 243723.669 161994.2539 202259.6739 145636.3629 143848.9264 182587.7694 206172.6294 164456.2916 181434.052 184387.5092 1.321801407 0.878553296 1.096927198 0.78983855 0.780144637 0.990239362 1.118148568 0.891905815 0.983982336 1 17.4923814 -4.755185721 24.98198515 0.945513225 1.321802035 0.515905381 0.108681673 176.7359917 705953.8096 0.02800691 0.253943144 1.76E-05 4.755185721 0.37628881 LQQTVPADAS(ph)PDSK ddPTM_A459_MK2206_30min_R1 4 LQQTVPADASPDSK 14 0 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 LQQT(0.001)VPADAS(0.997)PDS(0.002)K;LQQT(0.001)VPADAS(0.765)PDS(0.235)K;LQQTVPADAS(0.5)PDS(0.5)K;LQQTVPADAS(0.989)PDS(0.011)K 199.33 7.10E-05 45733900 15894.1 17602.2 17294.2 12248.1 12495.6 11678.7 15174.1 11371 17121 17941.7 TRUE FALSE 14542.22333 16456.29358 16120.31789 13191.45078 11997.87379 12339.9379 14161.86348 11271.58455 18900.78922 20164.45325 0.721181138 0.81610413 0.79944235 0.654193328 0.595001196 0.611964914 0.702318248 0.5589829 0.937332095 1 14.29952667 -8.395253672 5.461182631 0.995766714 0.685829714 0.67822783 0.079249802 0.140004411 5.242973288 0.084818851 0.022051295 4.02E-09 8.395253672 -0.309937 LQQTVPADAS(ph)PDSK ddPTM_A459_MK2206_30min_R2 3 LQQTVPADASPDSK 14 0 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 LQQT(0.003)VPADAS(0.995)PDS(0.002)K;LQQTVPADAS(0.965)PDS(0.035)K;LQQTVPADAS(0.978)PDS(0.022)K 179.66 7.29E-05 80263000 467214 405095 432651 423919 375596 309526 500055 387588 284070 487310 TRUE FALSE 502984.2631 384978.5714 447075.3684 389283.4617 360848.2138 321305.2288 434397.1778 438247.0824 308777.8951 471409.1146 1.066980352 0.816654917 0.948380832 0.825786879 0.765467197 0.681584676 0.921486591 0.929653392 0.655010448 1 18.84662013 -2.151840845 1.238680564 0.82782397 199.9910206 0.267699878 0.109826058 1635.198146 3.918192042 0.031289945 923758.3226 0.007049514 2.151840845 199.1631966 LQQTVPADAS(ph)PDSKCPICLDR ddPTM_A459_MK2206_30min_R2 1 LQQTVPADASPDSKCPICLDR 21 1 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 LQQT(0.033)VPADAS(0.965)PDS(0.002)KCPICLDR 50.992 0.031148 10104000 21065 26105 28000 38395 40946 29790 40461 23759 36904 33708 TRUE FALSE 22677.7526 24808.66366 28933.50603 35258.00568 39338.2543 30923.67932 35148.4221 26864.38288 40113.84321 32608.11072 0.695463555 0.760812666 0.887310101 1.081264903 1.206394772 0.948343177 1.07790428 0.823855853 1.230179925 1 14.99294323 -5.453641299 2.461092278 1.047736679 0.719418614 0.57495946 0.112219054 0.21027958 2.468214991 0.031014666 0.078268186 3.52E-06 5.453641299 -0.328318065 LQQTVPADASPDS(ph)K ddPTM_A459_MK2206_30min_R2 1 LQQTVPADASPDSK 14 0 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 LQQT(0.002)VPADAS(0.181)PDS(0.817)K 115.58 0.0027757 17448000 149080 128110 131160 131870 128290 111180 155150 129130 91712 137640 TRUE FALSE 160493.6794 121748.2437 135532.8089 121095.7992 123252.69 115411.0328 134778.6186 146007.7344 99688.94398 133148.8181 1.205370665 0.914377202 1.017904709 0.909477087 0.925676185 0.866782255 1.012240443 1.09657552 0.748703184 1 17.0226801 -4.757024675 24.97193534 0.946995803 1.205371055 0.425556371 0.091185973 126.5819571 715923.5362 0.021758791 0.167283186 1.75E-05 4.757024675 0.258375252 LQQTVPADASPDS(ph)KCPICLDR ddPTM_A459_MK2206_30min_R2 1 LQQTVPADASPDSKCPICLDR 21 1 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 LQQT(0.001)VPADAS(0.013)PDS(0.986)KCPICLDR 81.788 0.00093617 9681700 21360 36174 23280 35365 38762 26520 37301 32106 26434 27803 TRUE FALSE 22995.33802 34377.65176 24056.14358 32475.56637 37240.00912 27529.23718 32403.33389 36302.36444 28733.18154 26895.79039 0.854979076 1.278179643 0.894420399 1.207459082 1.384603634 1.023551894 1.20477344 1.349741499 1.068315194 1 14.71509277 -4.748188382 24.90385608 1.165552629 0.854978287 0.262452003 0.151138305 856.7805034 1610129.839 0.03673346 0.687616682 1.79E-05 4.748188382 -0.310574342 LQQVLQMESHIQSTSDR ddPTM_A459_MK2206_30min_R1 1 LQQVLQMESHIQSTSDR 17 0 Q14974;Q14974-2;J3KTM9;J3QKQ5 Q14974;J3QKQ5 KPNB1 Importin subunit beta-1 0 111.11 0.041254 8814900 2204.3 1947.6 2157.7 1732 1959.6 1982.3 2154.7 1933.8 1820.7 1812 FALSE TRUE 2016.81271 1820.810886 2011.241336 1865.39894 1881.544982 2094.536113 2010.963894 1916.89299 2009.96828 2036.48424 0.990340446 0.89409525 0.987604665 0.915989873 0.923918263 1.028505928 0.98746843 0.941275632 0.986979541 1 10.99186493 -6.737382128 24.99984846 0.98508957 0.940751957 0.311062911 0.034298364 302.4300192 314278.9249 0.011068248 0.011063032 1.83E-07 6.737382128 -0.044337614 LQS(ph)AGSAMPTSSSFK ddPTM_A459_MK2206_30min_R2 2 LQSAGSAMPTSSSFK 15 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2;H0Y4T4 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LQS(0.994)AGS(0.005)AMPTSSSFK;LQS(1)AGSAMPTSSSFK 137.44 0.00040164 7480600 39654 34356 37385 38146 32635 25140 21214.1 17481.3 17182.8 19406.3 TRUE FALSE 42689.94073 32649.931 38631.39724 35029.34978 31353.58592 26096.72032 18428.66319 19766.16593 18677.32888 18773.07402 2.273998424 1.739189382 2.057808817 1.865935741 1.670135956 1.390114389 0.981653999 1.052899803 0.994899869 1 14.19637728 -6.777157364 1.220798643 0.981985031 2.001448472 0.921502161 0.12888041 0.110688343 0.347528607 0.061810625 0.05490483 1.67E-07 6.777157364 1.019463441 up LQS(ph)EPESIR ddPTM_A459_MK2206_30min_R1 2 LQSEPESIR 9 0 P09496-2;F8WF69;P09496-4;P09496-3;P09496 P09496-2 CLTA Clathrin light chain A 1 LQS(0.974)EPES(0.026)IR;LQS(0.999)EPES(0.001)IR 137.01 0.0025907 11652700 2478.9 2572 3009.8 2644.2 2769 2402.3 2728.2 2699.8 2406.9 2557.1 TRUE FALSE 2268.056538 2404.562333 2805.503162 2847.856742 2658.704867 2538.31615 2546.206756 2676.195933 2657.105868 2873.892853 0.789193145 0.836691712 0.976203117 0.990940473 0.92512317 0.883232702 0.885978318 0.931209363 0.924566782 1 11.48879056 -5.0927481 4.467833371 0.934243956 0.798453343 0.642720759 0.038273659 0.140834084 4.717913064 0.010700542 0.032629592 8.08E-06 5.0927481 -0.135790613 LQS(ph)EPESIR ddPTM_A459_MK2206_30min_R2 2 LQSEPESIR 9 0 P09496-2;F8WF69;P09496-4;P09496-3;P09496 P09496-2 CLTA Clathrin light chain A 1 LQS(0.995)EPES(0.005)IR;LQS(0.93)EPES(0.07)IR 139.76 0.002352 13943400 35772 37071 44772 43987 34338 32357 40955 36459 35095 35970 TRUE FALSE 38510.73182 35230.10805 46264.67613 40393.12139 32989.71759 33588.36831 35577.5593 41224.31648 38147.49966 34796.30185 1.106747838 1.01246702 1.32958601 1.160845241 0.948081142 0.965285577 1.022452313 1.184732696 1.096309022 1 15.08664636 -6.224932307 24.06131688 1.041152629 1.155070867 0.257002126 0.096580885 603.3854814 397682.3904 0.030928672 0.03992691 5.96E-07 6.224932307 0.113918238 LQS(ph)EPESIRK ddPTM_A459_MK2206_30min_R1 2 LQSEPESIRK 10 1 P09496-2;F8WF69;P09496-4;P09496-3;P09496 P09496-2 CLTA Clathrin light chain A 1 LQS(1)EPESIRK;LQS(1)EPESIRK 118.77 0.010073 19524600 3587.2 3628.2 3647.9 3475.4 3631 3296.1 3450.5 3621.6 2909.5 2290 TRUE FALSE 3282.089803 3392.003521 3400.290712 3743.07591 3486.369581 3482.722334 3220.323441 3589.936733 3211.952937 2573.702489 1.27524056 1.317947018 1.321166967 1.454354544 1.354612507 1.353195386 1.25124153 1.394853037 1.24798921 1 11.32962958 -8.624791757 4.176817186 1.000038158 1.340195031 0.781679565 0.054292083 0.253141317 9.439815018 0.053583458 0.014011176 2.37E-09 8.624791757 0.340156873 LQS(ph)PIKEENTTAVEEIGR ddPTM_A459_MK2206_30min_R1 2 LQSPIKEENTTAVEEIGR 18 1 S4R3Y0;S4R3P6;S4R3N2;A0A087X1L0;S4R2X9;Q9NS73-3;Q9NS73-2;Q9NS73-5;Q9NS73 S4R3Y0 MBIP MAP3K12-binding inhibitory protein 1 1 LQS(0.986)PIKEENT(0.007)T(0.007)AVEEIGR;LQS(0.353)PIKEENT(0.323)T(0.323)AVEEIGR 60.542 0.026857 23570400 4192.7 4258.8 4724.6 4472.1 3512.5 3246.3 3815 4082.3 3685.9 4120.1 TRUE FALSE 3836.088848 3981.551346 4403.907315 4816.541917 3372.589687 3430.102701 3560.508311 4046.608881 4069.062495 4630.529093 0.82843424 0.859848036 0.951059204 1.040170965 0.728337868 0.740758266 0.768920406 0.873897734 0.878746772 1 12.17696133 -4.773470601 6.299982908 0.863477244 0.827565016 0.010965699 0.100070298 0.985268642 162.1387314 0.026830837 0.146558243 1.68E-05 4.773470601 -0.035912228 LQS(ph)PIKEENTTAVEEIGR ddPTM_A459_MK2206_30min_R2 3 LQSPIKEENTTAVEEIGR 18 1 S4R3Y0;S4R3P6;S4R3N2;A0A087X1L0;S4R2X9;Q9NS73-3;Q9NS73-2;Q9NS73-5;Q9NS73 S4R3Y0 MBIP MAP3K12-binding inhibitory protein 1 1 LQS(0.707)PIKEENT(0.111)T(0.181)AVEEIGR;LQS(0.917)PIKEENT(0.042)T(0.042)AVEEIGR;LQS(0.937)PIKEENT(0.049)T(0.014)AVEEIGR 83.395 0.0048377 20522700 59791 70301 60805 61338 70668 58289 74183 49548 57122 69820 TRUE FALSE 64368.64493 66809.95457 62832.20835 56326.48919 67893.21924 60507.22874 64442.68299 56024.09372 62090.36831 67541.77912 0.953019683 0.989164861 0.93027174 0.833950333 1.0052033 0.895848903 0.954115865 0.829473171 0.919288315 1 16.04349256 -5.432977337 6.174401851 0.914139329 0.969630062 0.108063537 0.056483423 0.443900186 24.8363551 0.014274478 0.030008548 3.69E-06 5.432977337 0.055490733 LQS(ph)SEAEVR ddPTM_A459_MK2206_30min_R1 1 LQSSEAEVR 9 0 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 LQS(0.909)S(0.091)EAEVR 73.233 0.043034 3508700 282.12 264.97 331.4 445.11 250.98 309.29 484.68 358.8 275.09 259.57 TRUE FALSE 258.1242125 247.7204048 308.9054913 479.3924493 240.9829351 326.8017325 452.3478815 355.6630494 303.6865899 291.7274913 0.88481278 0.849150019 1.058883721 1.643288561 0.82605494 1.120229469 1.550583662 1.219161924 1.040994075 1 8.188477536 -5.521508188 24.99997716 1.216120767 0.888740195 0.24538837 0.23122583 66.03116328 1204455.538 0.06280118 0.110730127 3.01E-06 5.521508188 -0.327380572 LQS(ph)SQEPEAPPPR ddPTM_A459_MK2206_30min_R2 2 LQSSQEPEAPPPR 13 0 Q5H909;Q9UNF1-2;Q9UNF1;Q5H907 Q5H909 MAGED2 Melanoma-associated antigen D2 1 LQS(0.663)S(0.337)QEPEAPPPR;LQS(0.5)S(0.5)QEPEAPPPR 88.224 0.024082 11904700 29234 33160 28988 41322 38573 31414 32215 28733 38440 30965 TRUE FALSE 31472.17752 31513.32262 29954.44545 37945.86042 37058.43021 32609.48178 27985.1318 32488.50176 41783.44172 29954.61459 1.050662075 1.052035656 0.999994354 1.266778456 1.23715263 1.088629656 0.934251106 1.084590879 1.394891648 1 14.87049065 -5.715125348 24.99997893 1.140146806 1.036011099 0.135642942 0.126445263 288.269335 155603.3333 0.035924379 0.062222572 1.93E-06 5.715125348 -0.104135706 LQSFDS(ph)PER ddPTM_A459_MK2206_30min_R1 4 LQSFDSPER 9 0 E9PGM9;P78332;P78332-2 E9PGM9 RBM6 RNA-binding protein 6 1 LQS(0.022)FDS(0.978)PER;LQS(0.003)FDS(0.997)PER;LQSFDS(1)PER;LQSFDS(1)PER 132.86 0.0032612 84331500 10124.1 9546.5 9942.4 8322.3 9975.5 8911.8 9698.2 8764.6 8390.1 7938.2 TRUE FALSE 9262.992131 8925.021115 9267.537589 8963.284988 9578.154712 9416.378415 9051.250773 8687.972026 9262.280919 8921.644146 1.038260659 1.000378514 1.038770146 1.004667395 1.073586276 1.055453262 1.014527213 0.973808402 1.038180941 1 13.12309389 -7.514341742 24.728043 1.002430365 1.03419715 0.247610031 0.02481871 518.7796905 1502694.885 0.011280211 0.006931436 3.06E-08 7.514341742 0.031766785 LQSFDS(ph)PER ddPTM_A459_MK2206_30min_R2 3 LQSFDSPER 9 0 E9PGM9;P78332;P78332-2 E9PGM9 RBM6 RNA-binding protein 6 1 LQSFDS(1)PER;LQSFDS(1)PER;LQS(0.005)FDS(0.995)PER 163.45 0.00086772 95491500 143385 157925 156591 169158 166655 145091 178517 131803 131309 161480 TRUE FALSE 154362.6658 150082.6741 161811.6658 155337.2503 160111.2873 150612.5397 155077.5035 149030.1046 142730.0195 156210.9208 0.988168209 0.960769409 1.035853735 0.99440711 1.02496859 0.964161397 0.992744314 0.954031279 0.913700647 1 17.25313579 -7.76933808 4.682624127 0.949482618 0.994999039 0.260224832 0.029276583 0.227677177 12.6144563 0.0155376 0.007743661 1.70E-08 7.76933808 0.045516422 LQSIGTENTEENR ddPTM_A459_MK2206_30min_R1 2 LQSIGTENTEENR 13 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ; 228.61 7.64E-12 15593700 1645.98 1595.1 1530.66 1440.52 2016.46 1726.93 1659.66 1748.97 1371.23 1258.14 FALSE TRUE 1505.980758 1491.2587 1426.763064 1551.4691 1936.140128 1824.707284 1548.94711 1733.67894 1513.774265 1414.007882 1.065044104 1.054632523 1.009020588 1.097213898 1.369256956 1.290450575 1.095430322 1.226074453 1.070555748 1 10.46557445 -6.010851993 24.49574825 1.192442292 1.045579856 0.246102702 0.102517924 509.6650288 1150451.424 0.029713943 0.040971709 9.75E-07 6.010851993 -0.146862436 LQSIGTENTEENR ddPTM_A459_MK2206_30min_R2 2 LQSIGTENTEENR 13 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ; 278.38 2.71E-47 25973000 34832 32133 29058 38865 27004 34107 33367 24255 28418 30204.2 FALSE TRUE 37498.7647 30537.32195 30026.77922 35689.60518 25943.68728 35404.96578 28985.87282 27425.21178 30889.74627 29218.63943 1.283385039 1.045131551 1.027658365 1.221467046 0.887915652 1.21172534 0.992033626 0.938620426 1.057193178 1 14.83460138 -4.761448077 10.82576983 1.044481388 1.284009494 0.342639622 0.100093857 0.076196108 278.2943195 0.023762454 0.133620323 1.73E-05 4.761448077 0.239528106 LQSIGTENTEENRR ddPTM_A459_MK2206_30min_R1 4 LQSIGTENTEENRR 14 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ;;; 140.31 0.00076245 362948000 13962.9 13950.5 15709.9 13540.2 16374.6 14917.5 16268.8 14902.2 12591.6 11990.1 FALSE TRUE 12775.28203 13042.31991 14643.55576 14583.06855 15722.36501 15762.11596 15183.53804 14771.91164 13900.54188 13475.52411 0.948036004 0.967852516 1.086678013 1.082189341 1.166734955 1.169684818 1.12674935 1.096203125 1.031539981 1 13.71805376 -5.264769055 2.575324975 1.107073111 0.946180223 0.5332218 0.05078696 0.214609477 2.73543936 0.014253985 0.046109399 5.44E-06 5.264769055 -0.160892888 LQSIGTENTEENRR ddPTM_A459_MK2206_30min_R2 4 LQSIGTENTEENRR 14 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ;;; 116.79 0.0035178 211418500 92684 118883 121691 164915 141221 139558 156469 125035 128435 120663 FALSE TRUE 99779.9583 112979.4431 125748.1172 151440.917 135675.954 144868.9775 135924.4323 141377.5038 139606.0441 116725.7762 0.854823686 0.967904835 1.07729519 1.297407667 1.162347841 1.241105283 1.164476577 1.211193521 1.19601727 1 16.83276366 -5.263434745 2.134436246 1.191167854 0.872436957 0.66910052 0.075793282 0.180823038 1.510493582 0.0195673 0.073413296 5.45E-06 5.263434745 -0.318730897 LQSS(ph)LESEVSVLASK ddPTM_A459_MK2206_30min_R2 2 LQSSLESEVSVLASK 15 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 LQS(0.034)S(0.966)LES(0.001)EVSVLASK;LQS(0.052)S(0.948)LESEVSVLASK 204.07 3.64E-29 0 12170.1 14471.5 11579.5 16051.4 13805.3 11515.5 14631.6 10077.5 12839.5 12403.5 TRUE FALSE 13101.85221 13752.86635 11965.55475 14739.94927 13263.23456 11953.73042 12710.45334 11394.66385 13956.2565 11998.77481 1.091932503 1.146189221 0.997231379 1.22845453 1.105382405 0.996245918 1.0593126 0.94965228 1.163140131 1 13.55059948 -6.67145674 7.081894246 1.032341 1.116364982 0.225464682 0.074371687 0.333315473 22.23068319 0.023546721 0.023481868 2.13E-07 6.67145674 0.084023981 LQT(ph)PNTFPK ddPTM_A459_MK2206_30min_R2 2 LQTPNTFPK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 LQT(0.5)PNT(0.5)FPK;LQT(0.525)PNT(0.475)FPK 108.9 0.027456 17606000 148018 141198 109153 143832 120835 93318 164897 126806 98019 151116 TRUE FALSE 159350.3719 134186.3126 112792.1065 132080.4655 116090.4108 96869.28188 143245.8258 143379.9796 106544.5154 146185.0973 1.090058938 0.917920603 0.771570486 0.903515255 0.794133006 0.662648134 0.979893494 0.980811192 0.728832948 1 17.15743672 -4.825633377 3.323471995 0.849093935 1.110801324 0.300026679 0.109019049 0.354994908 6.385630536 0.027726525 0.224835614 1.49E-05 4.825633377 0.261707389 LQTICLS(ph)GTGMK ddPTM_A459_MK2206_30min_R1 1 LQTICLSGTGMK 12 0 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 LQTICLS(0.637)GT(0.363)GMK 97.631 0.016025 8409800 1453.3 1486.4 1715.6 1724.2 1447.5 1418.5 1513.2 1371.3 1408.1 1408.2 TRUE FALSE 1329.689203 1389.63509 1599.149852 1856.998183 1389.84301 1498.814244 1412.257189 1359.310869 1554.477034 1582.658447 0.840161821 0.878038526 1.010420065 1.173341087 0.8781699 0.947023185 0.89233226 0.858878219 0.982193623 1 10.62813423 LQTPNT(ph)FPK ddPTM_A459_MK2206_30min_R2 3 LQTPNTFPK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 LQT(0.183)PNT(0.817)FPK;LQT(0.388)PNT(0.612)FPK;LQT(0.108)PNT(0.892)FPK 121.02 0.0065925 27767000 191645 180524 160906 170048 182160 146342 214878 145883 147183 193890 TRUE FALSE 206317.4885 171559.4407 166270.5257 156154.5344 175007.4831 151911.1474 186664.2605 164950.409 159984.7113 187563.3852 1.099988083 0.914674474 0.88647646 0.832542739 0.933057819 0.809918989 0.995206289 0.879438217 0.852963446 1 17.5170187 -4.760160088 4.096227268 0.893819192 1.122008048 0.500259508 0.059850283 0.18701708 6.032906007 0.014076822 0.13022868 1.74E-05 4.760160088 0.228188856 LQTTDNLLPMS(ph)PEEFDEVSR ddPTM_A459_MK2206_30min_R1 4 LQTTDNLLPMSPEEFDEVSR 20 0 A0A669KB68;A0A669KB56;A0A669KBA4;A0A669KB53;P42224 A0A669KB68 STAT1 Signal transducer and activator of transcription 1-alpha/beta 1 LQTTDNLLPMS(1)PEEFDEVSR;LQTTDNLLPMS(1)PEEFDEVSR;LQTTDNLLPMS(1)PEEFDEVSR;LQTTDNLLPMS(1)PEEFDEVSR 174.62 1.97E-10 21278800 12005.5 11203.4 12232.7 9775.5 12776.3 10022.1 12143.4 12073.4 10841.7 10007.7 TRUE FALSE 10984.36918 10474.05662 11402.37841 10528.4107 12267.39292 10589.54264 11333.33594 11967.84354 11968.73351 11247.52943 0.97660284 0.93123176 1.013767377 0.936064295 1.090674445 0.941499438 1.007628921 1.064041985 1.064121111 1 13.45732052 -6.210841626 0.568804046 1.038378337 0.949685778 0.234520783 0.047442252 1.579867397 1.025422208 0.03464005 0.075575228 6.15E-07 6.210841626 -0.088692558 LQTTDNLLPMS(ph)PEEFDEVSR ddPTM_A459_MK2206_30min_R2 2 LQTTDNLLPMSPEEFDEVSR 20 0 A0A669KB68;A0A669KB56;A0A669KBA4;A0A669KB53;P42224 A0A669KB68 STAT1 Signal transducer and activator of transcription 1-alpha/beta 1 LQTTDNLLPMS(1)PEEFDEVSR;LQTTDNLLPMS(1)PEEFDEVSR 99.859 0.0011927 1173600 9699.3 15834.4 12127.4 14769.8 15398.2 14209.9 17611.5 11627.8 12736.4 13336.4 TRUE FALSE 10441.88587 15048.08672 12531.72146 13563.06009 14793.5893 14750.6677 15299.08889 13147.59338 13844.18905 12901.23436 0.809371071 1.166406741 0.97135833 1.051299412 1.146680146 1.143353209 1.185862412 1.019095772 1.073090269 1 13.65522149 -4.751243815 24.99772597 1.087159004 0.8093705 0.576517806 0.070601756 317.4693271 778326.3287 0.0179068 0.242304312 1.77E-05 4.751243815 -0.277788504 LQVYEGGGQPPPQDLPGS(ph)PK ddPTM_A459_MK2206_30min_R1 1 LQVYEGGGQPPPQDLPGSPK 20 0 A0A494BYR6;Q86Y91-6;Q86Y91 A0A494BYR6 KIF18B Kinesin-like protein KIF18B 1 LQVYEGGGQPPPQDLPGS(1)PK 82.627 0.0021377 3881500 1698.1 1903.1 2045.3 1798.2 1284.7 930.98 1439.9 1606.5 1830.1 1734.9 TRUE FALSE 1553.667678 1779.207844 1906.470735 1936.697676 1233.527679 983.6912831 1343.846898 1592.45454 2020.345444 1949.83251 0.796821096 0.912492655 0.977761282 0.993263609 0.632632635 0.504500401 0.689211454 0.816713503 1.036163585 1 10.92913449 -6.250932795 24.94927877 0.752404502 0.923662134 0.145741495 0.158031013 1209.246956 2871516.094 0.050027006 0.063883007 5.61E-07 6.250932795 0.171257631 LQWDGSSDLS(ph)PSDSGSSK ddPTM_A459_MK2206_30min_R1 3 LQWDGSSDLSPSDSGSSK 18 0 K7EJK2;K7ENU1;K7EKG9;Q14CW9;Q14CW9-2 K7EJK2 ATXN7L3 Ataxin-7-like protein 3 1 LQWDGSSDLS(0.989)PS(0.01)DS(0.001)GSSK;LQWDGSSDLS(0.684)PS(0.052)DS(0.26)GS(0.004)S(0.001)K;LQWDGSS(0.001)DLS(0.776)PS(0.216)DS(0.005)GS(0.001)SK 253.31 2.99E-33 28864700 9274 9290.6 9769.4 8151.1 8628.4 7957.2 9023.3 8353.2 7522.4 6943.9 TRUE FALSE 8485.1976 8685.780251 9106.280347 8778.899134 8284.712557 8407.729788 8421.372121 8280.168853 8304.380399 7804.162756 1.087265587 1.112967595 1.166849108 1.124899545 1.061576087 1.077339114 1.079087198 1.060993871 1.06409626 1 12.93002815 -7.997304518 0.327855387 0.994627707 1.132145249 0.658759894 0.024740218 0.920699349 0.333155805 0.046053306 0.039764597 1.01E-08 7.997304518 0.137517542 LQWDGSSDLS(ph)PSDSGSSK ddPTM_A459_MK2206_30min_R2 2 LQWDGSSDLSPSDSGSSK 18 0 K7EJK2;K7ENU1;K7EKG9;Q14CW9;Q14CW9-2 K7EJK2 ATXN7L3 Ataxin-7-like protein 3 1 LQWDGSS(0.001)DLS(0.998)PS(0.001)DSGSSK;LQWDGS(0.001)S(0.006)DLS(0.625)PS(0.235)DS(0.134)GSSK 149.42 0.00016996 12374600 132476 165563 155716 165157 163164 143855 171953 139860 139621 164172 TRUE FALSE 142618.4644 157341.3822 160907.4937 151663.1448 156757.3615 149329.5028 149375.3645 158140.1822 151764.9822 158815.0811 0.898015878 0.990720661 1.013175151 0.954966895 0.987043299 0.940272812 0.940561586 0.995750411 0.955608127 1 17.27698839 -11.27551121 2.50589333 1.008106757 0.966201037 0.097989153 0.03214441 13793973.01 10047332.21 691666.6694 0.007947596 5.30E-12 11.27551121 -0.04190572 LQWDGSSDLSPSDS(ph)GSSK ddPTM_A459_MK2206_30min_R1 1 LQWDGSSDLSPSDSGSSK 18 0 K7EJK2;K7ENU1;K7EKG9;Q14CW9;Q14CW9-2 K7EJK2 ATXN7L3 Ataxin-7-like protein 3 1 LQWDGSSDLS(0.055)PS(0.013)DS(0.803)GS(0.101)S(0.028)K 188.09 2.04E-10 5862200 2104.8 1928.1 2451.8 2244.2 2198.6 1877 1894.1 2124.4 1972.8 1587.5 TRUE FALSE 1925.775707 1802.58034 2285.378647 2417.048673 2111.025106 1983.274118 1767.748045 2105.826595 2177.87962 1784.171485 1.079366935 1.010317873 1.280918716 1.35471769 1.183196304 1.111593888 0.990794921 1.18028262 1.220667205 1 10.80103857 -6.766687806 6.418385573 1.104708663 1.187547443 0.11650739 0.110860039 0.386833801 67.33892182 0.042235145 0.039288794 1.71E-07 6.766687806 0.08283878 LQYKT(ph)PPPSYNSALAQPVTTVPSMGETER ddPTM_A459_MK2206_30min_R1 1 LQYKTPPPSYNSALAQPVTTVPSMGETER 29 1 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 LQY(0.041)KT(0.479)PPPS(0.252)Y(0.218)NS(0.01)ALAQPVTTVPSMGETER 77.802 6.32E-05 16329000 947.1 844.57 814.66 653.99 938.48 1093.4 1276.1 1511 1261.5 1309.8 TRUE FALSE 866.5441716 789.5883395 759.363149 704.3604231 901.0983543 1155.307363 1190.973697 1497.789486 1392.637439 1472.067912 0.588657741 0.536380375 0.515847905 0.478483647 0.612130967 0.784819337 0.809048066 1.017473089 0.94604157 1 10.52362851 -7.077838737 1.167363344 0.988921924 0.524500429 0.942123592 0.047627626 0.104283614 0.287052184 0.029540942 0.019792815 8.36E-08 7.077838737 -0.464421496 LRAETEQGEQQR ddPTM_A459_MK2206_30min_R1 1 LRAETEQGEQQR 12 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 152.96 0.0014838 0 999.12 609.11 957.13 873.61 1170.3 892.13 859.32 712.41 492.33 433.84 FALSE TRUE 914.1395974 569.4568283 892.1626823 940.8955936 1123.684473 942.6416296 801.9963307 706.1814745 543.5094653 487.5873745 1.874822125 1.167907247 1.829749351 1.929696384 2.304580741 1.933277355 1.644825877 1.448317802 1.114691425 1 8.929516959 -8.007158705 1.662871222 1.018526908 1.828889413 0.575197492 0.264398173 0.3161238 1.569564969 0.259051684 0.085788937 9.84E-09 8.007158705 0.810362505 LRDLEDSLAR ddPTM_A459_MK2206_30min_R1 4 LRDLEDSLAR 10 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ;;; 163.66 0.0010944 55750000 23254.4 22660.1 23038.1 23765.4 30262.4 22831.5 22037.1 25885.6 14008.9 9502.7 FALSE TRUE 21276.49117 21184.92337 21474.33796 25595.81523 29056.98453 24124.1998 20567.04527 25659.28493 15465.17529 10679.96622 1.992187122 1.983613332 2.010712162 2.396619493 2.720700041 2.258827351 1.925759394 2.402562368 1.448054701 1 13.38261946 -8.446327102 3.540843113 1.006863277 2.211160202 0.743874157 0.238153896 0.113721163 2.748898939 0.250809714 0.066347339 3.58E-09 8.446327102 1.204296926 LRDLEDSLAR ddPTM_A459_MK2206_30min_R2 4 LRDLEDSLAR 10 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ;;; 175.65 0.00016264 27945000 61891.1 144454 109938 145077 166953 161505 132846 108373 160655 97303 FALSE TRUE 66629.5302 137280.6244 113603.278 133223.745 160397.5863 167651.1859 115403.1606 122537.7232 174628.4815 94128.01108 0.70786081 1.458446034 1.206901928 1.415346436 1.70403671 1.78109772 1.226023575 1.301819956 1.855223323 1 16.52233649 -4.532450799 2.156627341 1.462316555 3.17E-18 0.403357948 0.262286435 1.860653606 5.050681094 0.068580834 6.801385143 2.93E-05 4.532450799 -1.462316555 LREEMER ddPTM_A459_MK2206_30min_R2 1 LREEMER 7 1 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 0 101.6 0.021546 0 4432.1 5078.3 4098.4 7292.7 4961 5843 4943.1 3621.1 5275.9 5462.4 FALSE TRUE 4771.424984 4826.119007 4235.03861 6696.863082 4766.206213 6065.359459 4294.065032 4094.390203 5734.788245 5284.162335 0.902967146 0.913317703 0.801458839 1.267346205 0.901979521 1.147837457 0.81262928 0.774841866 1.085278589 1 12.36745907 LREIMRS(ph)R ddPTM_A459_MK2206_30min_R1 2 LREIMRSR 8 2 I3L0U5;Q6PK04;I3L385 I3L0U5 CCDC137 Coiled-coil domain-containing protein 137 1 LREIMRS(1)R;LREIMRS(1)R 131.62 0.003982 14182300 16068.6 14334 15827.3 13535.4 17934.1 15108.7 17035.3 15277.3 13576.6 13256.2 TRUE FALSE 14701.88119 13400.85399 14752.98697 14577.89885 17219.74682 15964.14154 15898.90622 15143.73218 14987.93615 14898.47814 0.986804226 0.899478046 0.990234495 0.978482414 1.155805758 1.07152834 1.067149683 1.016461684 1.006004507 1 13.86287735 -6.024166175 24.13306651 1.056376276 0.958145405 0.457485671 0.047784458 427.0714235 426486.1465 0.014546552 0.018895322 9.46E-07 6.024166175 -0.098230871 LREQGTES(ph)R ddPTM_A459_MK2206_30min_R1 1 LREQGTESR 9 1 P42166;G5E972;P42167;H0YJH7;P42167-2;P42167-3 P42166;G5E972 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 LREQGTES(1)R 126.66 0.022554 8642400 6669.3 4908.3 3343.9 4168.1 2952.6 2581.4 3710.1 4822.6 521.4 1340.6 TRUE FALSE 6102.041013 4588.768778 3116.925385 4489.127784 2834.99169 2727.556637 3462.605998 4780.436517 575.6013958 1506.683649 4.049981572 3.045608666 2.068732469 2.979476008 1.881610444 1.810304797 2.298163918 3.172820333 0.382032019 1 10.55716082 -1.522878745 0.197047223 1.194923144 12.71510277 0.523736873 0.712833049 48.69216183 0.582771708 1.361233723 172.4028483 0.03 1.522878745 11.52017962 LREQLQLLEEQHR ddPTM_A459_MK2206_30min_R1 2 LREQLQLLEEQHR 13 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 149.69 0.00040823 16378600 9354 9717.6 9663.9 8472.3 10179.7 8988.1 9302.5 8864.8 7590.2 6483 FALSE TRUE 8558.39318 9084.982474 9007.941393 9124.838014 9774.220993 9496.998455 8681.947198 8787.295988 8379.228452 7286.162984 1.174609077 1.246881588 1.236307973 1.25235162 1.341477128 1.303429319 1.191566428 1.206025175 1.150019354 1 12.83094355 -8.594292643 1.007424887 1.001449346 1.256946876 0.750106657 0.044478253 0.333815927 0.732564059 0.046130528 0.015206445 2.55E-09 8.594292643 0.25549753 LRESTPGDS(ph)PSTVNK ddPTM_A459_MK2206_30min_R1 2 LRESTPGDSPSTVNK 15 1 Q5T6F2 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 1 LRESTPGDS(0.999)PS(0.001)TVNK;LRESTPGDS(0.989)PS(0.01)T(0.001)VNK 171.52 2.49E-05 25082000 9669.7 9669.8 8754.2 7941.6 9130.3 7673.6 8443 8958.6 6428.8 5583.7 TRUE FALSE 8847.241237 9040.294262 8159.989295 8553.263408 8766.620817 8108.072601 7879.782875 8880.275905 7097.096766 6275.450911 1.409817615 1.440580827 1.300303263 1.362971925 1.396970663 1.292030281 1.255652062 1.415081726 1.13093017 1 12.61550341 -10.26722785 0.217252687 0.762850955 1.437594769 0.741814946 0.067990921 7.354036999 0.409012651 1.237136558 0.166138622 5.40E-11 10.26722785 0.674743814 LRESTPGDS(ph)PSTVNK ddPTM_A459_MK2206_30min_R2 1 LRESTPGDSPSTVNK 15 1 Q5T6F2 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 1 LRESTPGDS(0.996)PS(0.004)TVNK 135.61 0.0019416 3266000 13153 15012 11824 15919 14100 13784 15088 10008 14641 15943 TRUE FALSE 14160.00379 14266.52591 12218.20626 14618.36678 13546.36315 14308.55978 13106.92748 11316.07996 15914.44772 15422.78122 0.918122587 0.925029391 0.792218089 0.947842453 0.878334651 0.927754831 0.849842016 0.733724988 1.031879237 1 13.91277533 -8.309976338 24.99484535 1.015939876 0.8746542 0.451520333 0.063559003 412.9431911 212647.8015 0.061078195 0.015770438 4.90E-09 8.309976338 -0.141285676 LREVIEIEDASPT(ph)K ddPTM_A459_MK2206_30min_R1 1 LREVIEIEDASPTK 14 1 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 LREVIEIEDAS(0.081)PT(0.919)K 119.51 0.0030489 3853700 3337.4 3596.4 3766.8 2851 3013.8 2802.8 3203.7 3023.7 3566.3 3203.6 TRUE FALSE 3053.536605 3362.273706 3511.120111 3070.584514 2893.753964 2961.492114 2989.987018 2997.26411 3937.029647 3600.486154 0.848090084 0.93383881 0.975179451 0.852824975 0.80371201 0.822525622 0.830439805 0.832460946 1.093471681 1 11.813976 -8.258518338 24.99955022 1.046735851 0.863857857 0.648553527 0.05427437 164.9244042 1411527.817 0.045303316 0.015407476 5.51E-09 8.258518338 -0.182877994 LRFLS(ph)YEDLICWQIWEQFTSK ddPTM_A459_MK2206_30min_R1 1 LRFLSYEDLICWQIWEQFTSK 21 1 K7EN46;A6NK53 K7EN46 ZNF233 Zinc finger protein 233 1 LRFLS(0.836)Y(0.164)EDLICWQIWEQFTSK 50.392 0.033467 7095300 626.01 572.97 560.77 503.26 378.77 498.59 474.18 517.27 737.87 622.57 TRUE FALSE 572.7645622 535.6695489 522.7064948 542.0211724 363.6827888 526.8197349 442.5483174 512.7475629 814.574227 699.6986718 0.818587465 0.765571767 0.747045144 0.774649423 0.519770586 0.752923732 0.632484147 0.732811971 1.16417861 1 9.450589943 -8.251080518 23.56367216 1.082089289 0.714132548 0.730843719 0.08836084 139.51405 317361.4075 0.061361359 0.022558011 5.61E-09 8.251080518 -0.367956741 LRLCDDGPQLPT(ph)SPR ddPTM_A459_MK2206_30min_R2 1 LRLCDDGPQLPTSPR 15 1 O60504-2;O60504;H0YAZ3;H0YB51 O60504-2 SORBS3 Vinexin 1 LRLCDDGPQLPT(0.5)S(0.5)PR 99.915 0.010974 15090000 36544 118020 76358 96910 129200 111040 89167 68012 88912 37275 TRUE FALSE 39341.83674 112159.2984 78903.73761 88992.143 124126.9588 115265.705 77459.26579 76901.40192 96645.40504 36058.7198 1.091049182 3.110462574 2.188201302 2.467978439 3.442356232 3.196611129 2.148142425 2.132671441 2.680222858 1 15.13806056 -10.05666151 0.731139072 0.869209115 2.55165624 0.32258739 0.644543742 20.0430814 7.578518286 7.818381654 0.22772897 8.78E-11 10.05666151 1.682447125 LRLCDDGPQLPTS(ph)PR ddPTM_A459_MK2206_30min_R1 3 LRLCDDGPQLPTSPR 15 1 O60504-2;O60504;H0YAZ3;H0YB51 O60504-2 SORBS3 Vinexin 1 LRLCDDGPQLPT(0.224)S(0.776)PR;LRLCDDGPQLPT(0.049)S(0.951)PR;LRLCDDGPQLPT(0.007)S(0.993)PR 134.33 0.00025311 50209000 7353.2 6707.7 6711 6872.2 9283.4 6326.4 5840.9 8045.9 3663.3 2372.91 TRUE FALSE 6727.771727 6271.027511 6255.476018 7401.498035 8913.62252 6684.595301 5451.264218 7975.555545 4044.113144 2666.884005 2.522708792 2.351443669 2.345612335 2.775335568 3.342336038 2.506518951 2.044057487 2.99058959 1.516418838 1 11.38093936 -8.434669658 4.150235289 1.011422147 2.597008868 0.715649522 0.347232342 0.112900788 3.321336862 0.351612143 0.092205332 3.68E-09 8.434669658 1.585586721 LRLCDDGPQLPTS(ph)PR ddPTM_A459_MK2206_30min_R2 1 LRLCDDGPQLPTSPR 15 1 O60504-2;O60504;H0YAZ3;H0YB51 O60504-2 SORBS3 Vinexin 1 LRLCDDGPQLPT(0.269)S(0.731)PR 64.89 0.037178 15543000 41152 97742 82397 98742 122560 114620 88748 72178 114160 49005 TRUE FALSE 44302.62876 92888.27441 85144.07486 90674.46274 117747.6786 118981.9444 77095.28099 81611.91242 124089.4304 47405.97086 0.934536894 1.959421413 1.796062253 1.912722408 2.48381536 2.509851444 1.626277863 1.721553444 2.617590742 1 15.53278116 -4.758613305 5.350349729 2.001385556 0.875725446 0.302409203 0.462916195 0.19493162 16.63385277 0.112042426 0.818356394 1.74E-05 4.758613305 -1.12566011 LRLDT(ph)GSPEPETR ddPTM_A459_MK2206_30min_R2 1 LRLDTGSPEPETR 13 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LRLDT(0.492)GS(0.492)PEPET(0.015)R 120.29 0.031755 8584900 19467 29839 27247 33308 28513 30829 27929 20053 31162 28035 TRUE FALSE 20957.40849 28357.23865 28155.40138 30586.62985 27393.43635 32002.2192 24261.88875 22673.99595 33872.41443 27120.22025 0.772759524 1.045612403 1.038170086 1.127816425 1.010074258 1.180013249 0.894605152 0.836055008 1.24897269 1 14.72708127 -4.760503739 24.99999998 1.03845914 0.772759213 0.323793266 0.116762884 28.57493487 763108.6421 0.028656707 0.169138876 1.74E-05 4.760503739 -0.265699928 LRLDTGPQSLS(ph)GK ddPTM_A459_MK2206_30min_R1 2 LRLDTGPQSLSGK 13 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 LRLDTGPQS(0.009)LS(0.991)GK;LRLDTGPQS(0.016)LS(0.984)GK 157.07 0.0017328 31003000 6921.3 7162.3 7730.9 5612.2 4976 3922.2 3826.6 3612.7 3310.3 2868.6 TRUE FALSE 6332.60709 6696.032968 7206.148048 6044.452616 4777.795383 4144.271575 3571.334496 3581.114545 3654.417531 3223.983825 1.964218009 2.076943723 2.235168797 1.874839622 1.481953894 1.285450486 1.107739582 1.110773112 1.133509884 1 11.65462879 -6.424279944 1.460838172 1.103019081 2.101472497 0.964977612 0.082810505 0.069359856 0.299984595 0.034325822 0.041286063 3.76E-07 6.424279944 0.998453416 LRLDTGPQSLS(ph)GK ddPTM_A459_MK2206_30min_R2 1 LRLDTGPQSLSGK 13 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 LRLDTGPQS(0.002)LS(0.998)GK 112.01 0.0027803 31172000 57740 59269 65823 66319 57018 31673 34102 23213 19088 20274 TRUE FALSE 62160.61879 56325.78765 68017.50597 60900.52556 54779.18683 32878.33821 29624.36644 26247.0188 20748.23974 19612.46104 3.169445113 2.871938791 3.468076027 3.105195489 2.793080721 1.676400434 1.510486949 1.338282776 1.057911075 1 14.25948296 -6.807496075 1.671605093 1.214151768 3.17747088 0.959548455 0.184411162 0.067811322 0.391972987 0.082081236 0.072130097 1.56E-07 6.807496075 1.963319112 up LRLDTGS(ph)PEPETR ddPTM_A459_MK2206_30min_R1 3 LRLDTGSPEPETR 13 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LRLDT(0.207)GS(0.793)PEPETR;LRLDT(0.149)GS(0.851)PEPETR;LRLDT(0.016)GS(0.984)PEPETR 98.552 0.0068542 60869000 9532.8 6558.3 7271 5796.8 14882.2 11243.2 11366.3 10601.6 5110.1 3821.46 TRUE FALSE 8721.985301 6131.353478 6777.464778 6243.27054 14289.41046 11879.78027 10608.07487 10508.91133 5641.313182 4294.891315 2.030781377 1.427592232 1.578029403 1.453650414 3.327071493 2.766025819 2.469928594 2.446839875 1.313493816 1 12.06840591 LRLDTGS(ph)PEPETR ddPTM_A459_MK2206_30min_R2 1 LRLDTGSPEPETR 13 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LRLDT(0.162)GS(0.838)PEPETR 74.786 0.026648 18404000 47773 135680 75574 133930 152020 204630 86902 73777 157320 86712 TRUE FALSE 51430.53761 128942.3285 78093.59944 122987.4906 146050.931 212417.338 75491.66301 83419.90721 171003.4092 83882.59454 0.61312526 1.537176207 0.930986933 1.466186057 1.741135116 2.532317213 0.899968145 0.994484108 2.038604196 1 16.35608387 -4.758595044 24.62051725 1.468364151 0.613123859 0.199254797 0.509125659 111.9179705 968538.3961 0.12946908 0.873698316 1.74E-05 4.758595044 -0.855240292 LRLS(ph)PS(ph)PTSQR ddPTM_A459_MK2206_30min_R1 1 LRLSPSPTSQR 11 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 LRLS(1)PS(0.997)PT(0.002)S(0.001)QR 104.09 0.024943 37378000 5481 5314.6 5298.2 4368.4 5342.5 5262.1 5897.4 4708 4613.6 4341.5 TRUE FALSE 5014.812168 4968.618574 4938.572946 4704.854925 5129.696912 5560.035555 5503.995206 4666.838452 5093.20023 4879.357797 1.027760697 1.01829355 1.012135849 0.964236508 1.051305751 1.139501505 1.128016316 0.956445222 1.043825938 1 12.25247556 -6.492136705 23.10339238 1.059924191 1.007078185 0.157543333 0.052859801 501.4288728 376835.835 0.01765797 0.019986742 3.22E-07 6.492136705 -0.052846006 LRLS(ph)PS(ph)PTSQR ddPTM_A459_MK2206_30min_R2 1 LRLSPSPTSQR 11 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 LRLS(1)PS(0.997)PT(0.002)S(0.001)QR 97.2 0.038423 69683000 70251 71694 82435 97714 79870 96558 87543 71320 70396 77112 TRUE FALSE 75629.47057 68133.78021 85183.34176 89730.45363 76733.90249 100232.5824 76048.49894 80641.76888 76518.91683 74595.84176 1.013856387 0.913372362 1.141931504 1.202888144 1.028661929 1.343675197 1.019473702 1.081049117 1.025779923 1 16.18680759 -5.266761981 24.86510335 1.114504526 0.963614371 0.231510128 0.102290782 488.5100919 2282138.371 0.026094684 0.056976957 5.41E-06 5.266761981 -0.150890155 LRLS(ph)PSPTSQR ddPTM_A459_MK2206_30min_R1 3 LRLSPSPTSQR 11 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LRLS(0.477)PS(0.041)PT(0.477)S(0.006)QR;LRLS(0.831)PS(0.044)PT(0.121)S(0.004)QR;LRLS(0.823)PS(0.073)PT(0.102)S(0.001)QR 143.55 0.0039413 2442190000 20170.9 20019.1 20156.1 17698.6 21254.7 18388.5 20861.8 18369 16832.1 15650 TRUE FALSE 18455.25903 18715.85295 18787.96009 19061.74924 20408.08029 19429.64098 19470.14739 18208.40177 18581.85703 17588.84015 1.04925958 1.064075447 1.068175043 1.083741115 1.160285733 1.104657317 1.106960278 1.0352247 1.056457212 1 14.10237273 -8.275619793 1.368497672 1.007105307 1.091073864 0.420637648 0.031919413 0.425959638 1.566850573 0.032856513 0.010244073 5.30E-09 8.275619793 0.083968557 LRLS(ph)PSPTSQR ddPTM_A459_MK2206_30min_R2 4 LRLSPSPTSQR 11 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LRLS(0.812)PS(0.16)PT(0.027)S(0.001)QR;LRLS(0.733)PS(0.02)PT(0.219)S(0.028)QR;LRLS(0.915)PS(0.083)PT(0.002)SQR;LRLS(0.548)PS(0.372)PT(0.067)S(0.013)QR 147.96 0.00312 3212290000 293088.5 340773.2 316515.9 386942 324936.1 327454.3 337846.8 280884.8 291895.6 296979.2 TRUE FALSE 315527.5809 323850.8984 327068.3821 355327.6008 312177.476 339915.8028 293487.1093 317597.4078 317284.1517 287288.793 1.098294081 1.127266034 1.13846551 1.236830706 1.086632976 1.183185043 1.021575211 1.105498772 1.104408384 1 18.13214219 -7.258163717 24.9992116 1.066662156 1.145509921 0.415628003 0.050246327 318.564325 2431226.733 0.019465967 0.014471992 5.52E-08 7.258163717 0.078847765 LRLSPSPTSQR ddPTM_A459_MK2206_30min_R2 1 LRLSPSPTSQR 11 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 160.91 0.00027467 0 11270 13120 11919 14904 13771 12865 12055 10618 9828.6 13306 FALSE TRUE 12132.83987 12468.47988 12316.37351 13686.29552 13230.28135 13354.58659 10472.16402 12005.80906 10683.47386 12871.82631 0.942588843 0.968664398 0.956847398 1.063275342 1.027848032 1.037505189 0.813572508 0.93271994 0.82998897 1 13.65192914 -7.249251383 24.99594355 0.88846368 1.000310128 0.425886048 0.059795977 696.0601179 1427528.413 0.022654636 0.017407483 5.63E-08 7.249251383 0.111846448 LRPVS(ph)PEEIR ddPTM_A459_MK2206_30min_R2 2 LRPVSPEEIR 10 1 J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-5;Q08AE8-2;Q08AE8;K7EMJ7 J3KNG6 SPIRE1 Protein spire homolog 1 1 LRPVS(1)PEEIR;LRPVS(1)PEEIR 95.183 0.01267 7925300 18361.4 14379.9 14249.4 15476.2 12301.3 13802.8 17587.3 12559.3 13270 19185.9 TRUE FALSE 19767.1629 13665.81508 14724.46788 14211.74495 11818.28915 14328.07523 15278.06638 14200.84363 14424.20061 18559.86565 1.065048814 0.736310021 0.793349917 0.76572456 0.636765878 0.7719924 0.823177639 0.7651372 0.777171607 1 14.17989865 -10.63600256 14.65976874 0.999999996 0.785190921 0.265989181 0.102600652 0 0 0.097490485 0.023644916 2.31E-11 10.63600256 -0.214809075 LRRPS(ph)PPEPWDEEDGASCSTFFGSEER ddPTM_A459_MK2206_30min_R1 2 LRRPSPPEPWDEEDGASCSTFFGSEER 27 2 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 LRRPS(1)PPEPWDEEDGASCSTFFGSEER;LRRPS(1)PPEPWDEEDGASCSTFFGSEER 86.722 6.03E-05 33089000 2831.3 2917.1 3133.6 3274.7 3964 2779.8 3061.6 2945.8 2071.09 1717.46 TRUE FALSE 2590.483067 2727.19626 2920.899963 3526.917961 3806.105486 2937.189874 2857.36625 2920.045181 2286.387217 1930.231911 1.342057943 1.412885283 1.513237837 1.827199075 1.971838443 1.521677192 1.480322771 1.512794999 1.184514257 1 10.91455848 -8.338842277 1.40410202 0.994567811 1.602349333 0.552455664 0.177943367 0.337367675 1.354682599 0.189914991 0.058199748 4.58E-09 8.338842277 0.607781522 LRS(ph)PFLQK ddPTM_A459_MK2206_30min_R2 1 LRSPFLQK 8 1 H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3;Q9UJU6-6 H0Y5J4;B4DDD6 DBNL Drebrin-like protein 1 LRS(1)PFLQK 80.916 0.024742 48388000 107310 105680 91602 99557 78975 74613 88979 49308 64481 73513 TRUE FALSE 115525.7361 100432.0849 94655.96496 91422.87463 75874.04468 77452.45 77295.95042 55752.7249 70089.44083 71114.27683 1.624508344 1.412263322 1.331040252 1.285576943 1.066931256 1.089126592 1.086925915 0.783987792 0.985588885 1 16.1178516 -5.390478492 0.475596836 0.916070614 1.830662729 0.882560269 0.079666281 0.876447797 0.232985366 0.059620626 0.423623466 4.07E-06 5.390478492 0.914592115 LRS(ph)PPEALVQGR ddPTM_A459_MK2206_30min_R1 1 LRSPPEALVQGR 12 1 Q9UHB6;Q9UHB6-4;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 LRS(1)PPEALVQGR 64.842 0.044054 10574000 2177.4 2433.1 2230.8 2306.5 2050.7 1737 1965.2 2147.8 2142.9 1489.9 TRUE FALSE 1992.200696 2274.704748 2079.379511 2484.14703 1969.016277 1835.347439 1834.105094 2129.022011 2365.662123 1674.48006 1.18974286 1.358454366 1.241806075 1.48353336 1.175897118 1.096070047 1.095328118 1.271452591 1.412774138 1 10.70949748 LRS(ph)PPEALVQGR ddPTM_A459_MK2206_30min_R2 3 LRSPPEALVQGR 12 1 Q9UHB6;Q9UHB6-4;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 LRS(1)PPEALVQGR;LRS(1)PPEALVQGR;LRS(1)PPEALVQGR 115.09 0.0029373 31331400 48265.8 53845.6 52578.9 70589 56918 52381.6 72393 51211.4 60689.5 58080.7 TRUE FALSE 51961.06676 51171.7058 54331.85428 64821.6529 54683.11333 54375.01849 62887.71214 57904.90582 65968.16301 56185.53152 0.924812231 0.910763046 0.967007926 1.153707212 0.973259696 0.96777617 1.119286593 1.030601727 1.174113001 1 15.77791105 -5.536034794 23.46040783 1.056456684 0.923062071 0.429202067 0.067856031 97.82063947 174436.7226 0.018317258 0.031757507 2.91E-06 5.536034794 -0.133394613 LRS(ph)PSNDSAHR ddPTM_A459_MK2206_30min_R1 6 LRSPSNDSAHR 11 1 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LRS(0.982)PS(0.018)NDS(0.001)AHR;LRS(0.961)PS(0.029)NDS(0.01)AHR;LRS(0.979)PS(0.021)NDSAHR;LRS(0.99)PS(0.008)NDS(0.002)AHR;LRS(0.904)PS(0.096)NDSAHR;LRS(0.99)PS(0.007)NDS(0.003)AHR 135.81 0.0057909 59741200 3701.73 2248.17 2403.23 2533.96 3400.66 3341.96 4047.41 3484.21 438.11 1772.45 TRUE FALSE 3386.878425 2101.813724 2240.105443 2729.126038 3265.204511 3531.178887 3777.414664 3453.747919 483.6531023 1992.034487 1.700210738 1.055109105 1.124531456 1.370019473 1.639130513 1.772649475 1.896259672 1.73377918 0.242793539 1 10.96002691 -8.254848568 24.99573994 0.621396747 1.524425631 0.577713483 0.312803113 362.0489236 1373088.412 0.241693573 0.086578206 5.56E-09 8.254848568 0.903028884 LRS(ph)PSNDSAHR ddPTM_A459_MK2206_30min_R2 2 LRSPSNDSAHR 11 1 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LRS(0.895)PS(0.098)NDS(0.007)AHR;LRS(0.989)PS(0.008)NDS(0.003)AHR 82.483 0.021944 82160900 3297.4 4550.2 3289.2 5977.2 1924.72 4975.8 4563.39 3263.9 1993.67 2659.2 TRUE FALSE 3549.851479 4324.243685 3398.860286 5488.84364 1849.145822 5165.157556 3964.211411 3690.502937 2167.075813 2572.430522 1.3799601 1.680995326 1.321264173 2.133718906 0.718832173 2.007890014 1.54103731 1.434636584 0.842423457 1 11.3289164 -8.177880217 4.237980288 0.920426863 1.542818449 0.304566376 0.368161019 0.253837202 8.041826225 0.262308092 0.088793043 6.64E-09 8.177880217 0.622391585 LRS(ph)YEDMIGEEVPSDQYYWAPLAQHER ddPTM_A459_MK2206_30min_R1 5 LRSYEDMIGEEVPSDQYYWAPLAQHER 27 1 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 LRS(0.598)Y(0.396)EDMIGEEVPS(0.006)DQYYWAPLAQHER;LRS(0.818)Y(0.182)EDMIGEEVPSDQYYWAPLAQHER;LRS(0.916)Y(0.084)EDMIGEEVPSDQYYWAPLAQHER;LRS(0.973)Y(0.027)EDMIGEEVPSDQYYWAPLAQHER;LRS(0.543)Y(0.454)EDMIGEEVPS(0.003)DQYYWAPLAQHER 116.04 3.61E-12 36443000 5362.08 4465.07 4381.94 3864.21 4899.23 3782.21 4322.32 3275.47 3825.35 3461.67 TRUE FALSE 4906.006939 4174.393131 4084.506122 4161.832124 4704.083295 3996.355462 4033.985919 3246.832911 4223.008822 3890.527814 1.261013203 1.072963189 1.049859124 1.069734577 1.209111853 1.02720136 1.036873687 0.834548181 1.085459101 1 11.92575018 -7.115771567 2.564657702 0.972344463 1.120443247 0.367373445 0.08693847 0.31358642 4.02184085 0.036891789 0.027314531 7.66E-08 7.115771567 0.148098784 LRSDAGLESDT(ph)AMK ddPTM_A459_MK2206_30min_R1 1 LRSDAGLESDTAMK 14 1 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 LRSDAGLES(0.028)DT(0.972)AMK 127.18 0.012825 5388100 1404.8 1672.6 1763.2 1828.3 1388.3 1326.1 1094.8 1549.7 1084.4 834.62 TRUE FALSE 1285.314383 1563.713436 1643.518897 1969.115983 1333.001071 1401.182636 1021.76789 1536.151136 1197.127261 938.0190267 1.370243403 1.667038079 1.752116801 2.099228189 1.421081058 1.493767819 1.089282691 1.63765456 1.276229188 1 9.873473376 -6.497483916 22.7620669 1.340699193 1.725334124 0.409932979 0.237709278 261.7611616 234623.4257 0.073632765 0.083038913 3.18E-07 6.497483916 0.384634931 LRT(ph)STSDLSR ddPTM_A459_MK2206_30min_R1 1 LRTSTSDLSR 10 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 LRT(0.59)S(0.199)T(0.199)S(0.013)DLSR 147.62 0.014071 0 4702.4 5482.6 5397.8 4287.4 5926.8 5583.7 5505.4 4442.1 4041.1 3519.2 TRUE FALSE 4302.436187 5125.681743 5031.412375 4617.616291 5690.723006 5899.844269 5138.144811 4403.263188 4461.186806 3955.185065 1.087796428 1.2959398 1.272105424 1.167484256 1.438800691 1.491673379 1.299090871 1.113288788 1.127933771 1 11.94952949 -7.797905006 4.596995816 1.083523923 1.301562571 0.425840686 0.113414886 0.215441266 10.23492305 0.068345719 0.032802255 1.59E-08 7.797905006 0.218038648 LRTSTS(ph)DLSR ddPTM_A459_MK2206_30min_R1 1 LRTSTSDLSR 10 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 LRT(0.009)S(0.07)T(0.07)S(0.852)DLSR 120.03 0.024753 30522000 4497.9 4905 5192.2 4273.7 5260.1 4839.4 4977.4 4805.4 3849.8 3465.1 TRUE FALSE 4115.329986 4585.683608 4839.76793 4602.861115 5050.579079 5113.402646 4645.366728 4763.386894 4250.000487 3894.382748 1.056734854 1.177512306 1.242756104 1.181923147 1.296888212 1.313020054 1.192837743 1.223142973 1.091315559 1 11.92717897 -8.460388834 2.681452116 1.000782219 1.215864619 0.508739007 0.067495548 0.212009569 3.283401048 0.068253106 0.018484877 3.46E-09 8.460388834 0.2150824 LRVEFPR ddPTM_A459_MK2206_30min_R2 1 LRVEFPR 7 1 Q13242;S4R3G0;J3KTL2;Q07955;Q07955-3;Q07955-2 Q13242;J3KTL2 SRSF9;SRSF1 Serine/arginine-rich splicing factor 9;Serine/arginine-rich splicing factor 1 0 108.09 0.046267 6809900 14306 19474 16256 20184 16829 17871 14838 13375 15534 18117 FALSE TRUE 15401.27836 18506.94948 16797.96693 18534.90263 16168.2089 18551.09343 12889.75278 15123.15842 16885.11924 17525.84377 0.878775285 1.055980512 0.958468371 1.05757548 0.922535263 1.058499304 0.735471167 0.862906153 0.963441159 1 14.09719628 -7.232780471 24.99998185 0.879030052 0.990457371 0.233510519 0.086119421 908.395195 792420.0893 0.031405414 0.024322099 5.85E-08 7.232780471 0.111427319 LRVQS(ph)PEPPAPER ddPTM_A459_MK2206_30min_R1 4 LRVQSPEPPAPER 13 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER 128.57 0.00099728 61267900 5297.77 4729.57 4367.45 4514.83 5485.53 5015.32 5350.66 4421.26 4436.75 4106.87 TRUE FALSE 4847.166842 4421.674133 4070.999662 4862.562989 5267.029724 5299.283084 4993.727234 4382.60539 4897.96604 4615.660061 1.050156809 0.957972224 0.881997289 1.053492442 1.141121672 1.148109483 1.081909666 0.949507835 1.061162645 1 12.17232126 -5.918992917 9.5792791 1.069050153 0.96310921 0.312459418 0.067019609 0.405729492 44.40149902 0.020397977 0.030297522 1.21E-06 5.918992917 -0.105940943 LRVQS(ph)PEPPAPER ddPTM_A459_MK2206_30min_R2 3 LRVQSPEPPAPER 13 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER 79.013 0.021965 63470000 47816 37433.4 46575 55981 49903 61644 65513 33493.2 68866 50775 TRUE FALSE 51476.82972 35574.51179 48127.78725 51407.17323 47943.55748 63989.90562 56911.0644 37870.87624 74855.8402 49118.21591 1.048019126 0.72426311 0.979835818 1.046600987 0.976085075 1.30277341 1.158654958 0.771014898 1.523993468 1 15.58397054 -5.968711742 1.424692478 1.128203321 0.886566951 0.180911213 0.201786658 0.702816367 2.893939656 0.068336829 0.126096811 1.07E-06 5.968711742 -0.24163637 LRWT(ph)PLNSSTIIGY(ph)R ddPTM_A459_MK2206_30min_R1 1 LRWTPLNSSTIIGYR 15 1 H0Y7Z1 H0Y7Z1 FN1 2 LRWT(1)PLNS(0.002)S(0.002)T(0.001)IIGY(0.995)R 73.498 0.036815 0 615.67 565.83 619.51 412.81 470.15 569.7 458.97 538.52 459.2 773.22 TRUE FALSE 563.3040335 528.9943642 577.4593873 444.6046977 451.4229299 601.9559217 428.3529487 533.8117764 506.9354833 869.0123311 0.648211784 0.608730561 0.664500798 0.511620701 0.519466656 0.692689735 0.492919299 0.61427411 0.583346709 1 9.763232839 -11.06269218 2.511849646 1.02852263 0.59151419 0.784591494 0.063995352 2677956.29 2437381.772 515499.5423 0.016201759 8.66E-12 11.06269218 -0.43700844 LS(ph)AEYEK ddPTM_A459_MK2206_30min_R2 2 LSAEYEK 7 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 LS(1)AEYEK;LS(1)AEYEK 105.2 0.017652 222140000 1111460 468950 705960 489280 380560 323590 719110 488570 333240 915050 TRUE FALSE 1196554.232 445662.6249 729496.3541 449304.2589 365617.3022 335904.4442 624689.9932 552427.7765 362224.6128 885191.9934 1.35174543 0.503464365 0.824110882 0.507578313 0.41303729 0.379470721 0.705711301 0.624076789 0.409204574 1 19.75563088 -3.082171068 9.920825759 0.642018018 0.816604081 0 0.29702477 0 0 0.065598154 0 0.000827616 3.082171068 0.174586063 LS(ph)ASPAQEK ddPTM_A459_MK2206_30min_R1 1 LSASPAQEK 9 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LS(0.669)AS(0.331)PAQEK 92.866 0.025325 9371200 4380.3 3870.3 3747.2 3213.6 3639.8 3532.5 3593.7 3288.7 3351.6 2747.8 TRUE FALSE 4007.732483 3618.342767 3492.850504 3461.112029 3494.819059 3732.507097 3353.97083 3259.947243 3700.010814 3088.218209 1.297749127 1.17166033 1.131024516 1.120747238 1.131661956 1.208628032 1.086053706 1.055607804 1.198105368 1 11.59255898 -1.522878745 0.07418272 0.897538466 1.732728115 0.476373242 0.057946626 217.1559179 1.187945817 2.199011156 18.76983644 0.03 1.522878745 0.835189649 LS(ph)CEPVMEEK ddPTM_A459_MK2206_30min_R1 1 LSCEPVMEEK 10 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 LS(1)CEPVMEEK 129.84 0.0028806 4967100 1184.6 1661.1 1736.1 1390.2 1386.1 1065.2 1239.1 1131.6 1254.4 1275.5 TRUE FALSE 1083.843549 1552.962088 1618.258369 1497.273445 1330.888702 1125.510703 1156.4419 1121.706541 1384.799369 1433.51857 0.756072208 1.083321919 1.128871578 1.044474398 0.928407019 0.785138559 0.806715675 0.782484834 0.966014252 1 10.48534488 -6.497445589 4.598759101 0.850494582 1.016051945 0.223823096 0.115045985 0.25531073 13.36272418 0.03764714 0.040816321 3.18E-07 6.497445589 0.165557363 LS(ph)CEPVMEEK ddPTM_A459_MK2206_30min_R2 1 LSCEPVMEEK 10 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 LS(1)CEPVMEEK 132.56 0.0024188 5568100 19782 21629 19814 16524 15675 10507 13864 13288 9156.9 17732 TRUE FALSE 21296.52513 20554.93531 20474.58887 15173.93634 15059.52074 10906.85125 12043.64015 15024.78722 9953.35061 17153.40629 1.241533301 1.198300499 1.193616505 0.884601932 0.877931793 0.635841713 0.702113618 0.875906917 0.580255049 1 14.06620747 -5.885232327 1.717454019 0.755178741 1.234535552 0.730436078 0.117331858 0.172521422 1.036475648 0.036214365 0.067201694 1.30E-06 5.885232327 0.479356811 LS(ph)DGCHDR ddPTM_A459_MK2206_30min_R2 1 LSDGCHDR 8 0 Q9BTA9-5;Q9BTA9;A0A494C0S5;J3QT76 Q9BTA9-5 WAC WW domain-containing adapter protein with coiled-coil 1 LS(1)DGCHDR 73.841 0.0397 0 22956 16124 14423 19229 17127 11627 17861 20418 16464 19003 TRUE FALSE 24713.52901 15323.30561 14903.85562 17657.92919 16454.50792 12069.47363 15515.82925 23086.70271 17896.00896 18382.93367 1.344373507 0.833561492 0.810744133 0.960561002 0.895096954 0.656558624 0.844034447 1.255876952 0.973512133 1 14.1660794 -7.7357063 24.92890333 1.086021112 0.891973531 0.153211137 0.180559483 346.1405412 335323.8576 0.085116242 0.049119637 1.84E-08 7.7357063 -0.194047581 LS(ph)DGEINAQESTYK ddPTM_A459_MK2206_30min_R2 1 LSDGEINAQESTYK 14 0 A0A3B3IRW6;Q2KHR3-2;Q2KHR3 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 LS(1)DGEINAQESTYK 154.47 0.00034358 3413700 15339 13796 13620 14621 11777 8687.5 13268 9324 8085.7 15652 TRUE FALSE 16513.36563 13110.9107 14074.084 13426.41753 11314.57581 9018.1089 11525.89566 10542.67881 8788.97957 15141.27652 1.090619117 0.865905241 0.929517665 0.886742773 0.747266968 0.595597662 0.76122351 0.696287318 0.580464901 1 13.88619922 -6.173629386 2.361806785 0.70627518 0.952139196 0.433248689 0.120395843 0.267268005 2.922068166 0.037208934 0.050467892 6.70E-07 6.173629386 0.245864016 LS(ph)DSENEEPSR ddPTM_A459_MK2206_30min_R1 1 LSDSENEEPSR 11 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 LS(0.837)DS(0.163)ENEEPSR 92.781 0.02514 0 963.75 1167 890.66 1265.2 602.12 860.79 1181.2 1165.4 685.27 803.06 TRUE FALSE 881.7780016 1091.028088 830.2044807 1362.645923 578.1362854 909.5271859 1102.404303 1155.211031 756.5062688 902.5491356 0.976986146 1.208829575 0.919844082 1.509774781 0.640559348 1.007731491 1.221434113 1.279942537 0.838188459 1 9.817861666 -8.285887335 24.93751598 0.919094238 1.093449343 0.089480382 0.225177745 2251.075926 2296129.532 0.21015657 0.054379156 5.18E-09 8.285887335 0.174355106 LS(ph)FADR ddPTM_A459_MK2206_30min_R1 1 LSFADR 6 0 A0A087X0I9;Q04759-3;Q04759-2;Q04759 A0A087X0I9 PRKCQ Protein kinase C;Protein kinase C theta type 1 LS(1)FADR 101.25 0.030721 6686400 5155.9 5725 5487.3 3871.7 3995.5 5277.4 6044.3 4195.9 6361 8432 TRUE FALSE 4717.36363 5352.301459 5114.837364 4169.899005 3836.350774 5576.201827 5641.095775 4159.215689 7022.248713 9476.619818 0.497789689 0.564790143 0.539732253 0.440019657 0.404822695 0.588416749 0.595264544 0.438892323 0.741007748 1 13.21015685 -8.533609858 3.34701391 0.99921185 0.512165297 0.858748485 0.063048411 0.078879285 2.366644815 0.064070085 0.01695629 2.93E-09 8.533609858 -0.487046553 LS(ph)FADR ddPTM_A459_MK2206_30min_R2 1 LSFADR 6 0 A0A087X0I9;Q04759-3;Q04759-2;Q04759 A0A087X0I9 PRKCQ Protein kinase C;Protein kinase C theta type 1 LS(1)FADR 94.114 0.040708 6864100 33523 24959 25179 24164 22749 23120 28576 23754 18538 28510 TRUE FALSE 36089.54665 23719.57235 26018.45529 22189.7239 21855.75996 23999.8478 24823.93687 26858.72936 20150.40173 27579.72103 1.308553724 0.860036703 0.943390807 0.804566655 0.792457615 0.870199077 0.900079332 0.973857905 0.730623842 1 14.75132024 -4.760471126 24.99937245 0.872193324 1.308554237 0.726534486 0.079775801 11.99867434 309636.1619 0.019070899 0.112792953 1.74E-05 4.760471126 0.436360912 LS(ph)GEFSR ddPTM_A459_MK2206_30min_R2 1 LSGEFSR 7 0 Q96NG3 Q96NG3 TTC25 Tetratricopeptide repeat protein 25 1 LS(0.991)GEFS(0.009)R 85.862 0.035661 2685100 15897 11099 11102 14368 9625.7 9717.3 13384 12345 11123 13784 TRUE FALSE 17114.08654 10547.8398 11472.13514 13194.08844 9247.746653 10087.09866 11626.66472 13958.53389 12090.45843 13334.22921 1.283470253 0.791034835 0.860352328 0.989490148 0.6935344 0.756481571 0.871941268 1.046819705 0.906723459 1 13.70284681 -10.72209215 14.92194656 0.999999996 0.900270807 0.023294701 0.159393838 0 0 0.153511172 0.037231928 1.90E-11 10.72209215 -0.099729189 LS(ph)GFSFKK ddPTM_A459_MK2206_30min_R2 1 LSGFSFKK 8 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 LS(0.984)GFS(0.016)FKK 128.35 0.0078145 356710000 820500 1002000 715980 775800 640440 585530 809470 637230 680300 668110 TRUE FALSE 883318.1109 952242.137 739850.4159 712414.6583 615293.1076 607812.7545 703185.6167 720518.1489 739471.2643 646309.6254 1.366710437 1.473352863 1.144730616 1.10228075 0.952009816 0.940435869 1.088001151 1.114818843 1.144143976 1 19.30186595 -5.410980455 2.99594007 1.048152933 1.42274044 0.811309491 0.070250673 0.112047492 1.898952703 0.021118811 0.051041114 3.88E-06 5.410980455 0.374587507 LS(ph)GPAELR ddPTM_A459_MK2206_30min_R2 2 LSGPAELR 8 0 G3V599;Q96PC5-6;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-14;Q96PC5-7;Q96PC5-12;Q96PC5;Q96PC5-5;Q96PC5-8;Q96RT6 G3V599 MIA2;CTAGE1 Melanoma inhibitory activity protein 2;cTAGE family member 2 1 LS(1)GPAELR;LS(1)GPAELR 97.597 0.020141 14939400 78945 38516 44093 53217 37445 46302 83198 39425 46752 56496 TRUE FALSE 84989.0899 36603.35145 45563.03861 48869.00087 35974.72115 48064.05506 72274.00266 44577.98287 50818.40445 54652.54015 1.555080325 0.669746573 0.833685653 0.894176204 0.658244266 0.879447779 1.322427146 0.815661683 0.929845243 1 15.73800093 -9.517628168 18.98257615 1 0.933774527 0 0.266683844 0 0 0.251158866 0.060914973 3.04E-10 9.517628168 -0.066225473 LS(ph)GSRQDLIPSYSLGSNK ddPTM_A459_MK2206_30min_R2 1 LSGSRQDLIPSYSLGSNK 18 1 Q9NQT8;H0YBA8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 LS(0.545)GS(0.455)RQDLIPSYSLGSNK 74.251 0.0090333 10949000 41556 83002 55910 74518 68541 66543 58335 59947 64314 55783 TRUE FALSE 44737.55931 78880.24138 57774.0115 68429.64103 65849.73595 69075.34049 50675.54443 67782.27873 69907.91547 53962.80528 0.829044359 1.461752053 1.07062654 1.268089023 1.220280073 1.280054662 0.93908284 1.256092569 1.295483345 1 15.71967773 LS(ph)HSDEKPYQCPVCQQR ddPTM_A459_MK2206_30min_R2 1 LSHSDEKPYQCPVCQQR 17 1 I3L2Z5;A0A087WWR2;P56270-3;P56270;P56270-2 I3L2Z5 MAZ Myc-associated zinc finger protein 1 LS(0.526)HS(0.474)DEKPYQCPVCQQR 53.777 0.036311 5125300 8532.3 9538.2 6680.7 10752 10017 6677.6 10468 7693.7 7129 9646.9 TRUE FALSE 9185.539448 9064.546858 6903.431204 9873.527206 9623.682249 6931.720747 9093.539026 8699.293006 7749.067534 9332.122443 0.984292641 0.971327467 0.739749317 1.05801518 1.031242604 0.742780733 0.974434174 0.932188048 0.830364966 1 13.18798952 LS(ph)IIAT(ph)DHT(ph)Y(ph)RR ddPTM_A459_MK2206_30min_R1 1 LSIIATDHTYRR 12 1 A0A087X0S5;P12109 A0A087X0S5 COL6A1 Collagen alpha-1(VI) chain 4 LS(1)IIAT(1)DHT(1)Y(1)RR 56.551 0.039165 5599700 5254.8 3086.6 2800.3 4655.5 3183.4 5217 4039.8 2920.7 2802.6 3294.5 TRUE FALSE 4807.851666 2885.661779 2610.223438 5014.067417 3056.598437 5512.382032 3770.312313 2895.164628 3093.940299 3702.647532 1.298490235 0.779350925 0.70496136 1.35418437 0.825516988 1.488767695 1.018274702 0.781917426 0.835602166 1 11.85434151 -7.641310238 6.493786887 0.85870815 1.06260922 0.115861592 0.247668203 0.479132718 25.22543687 0.119040333 0.067842614 2.28E-08 7.641310238 0.20390107 LS(ph)LDLSHR ddPTM_A459_MK2206_30min_R1 2 LSLDLSHR 8 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0J9YYG8;A0A0A0MSL1 Q8TDM6-4 DLG5 Disks large homolog 5 1 LS(1)LDLSHR;LS(1)LDLSHR 104.79 0.0079196 3705100 8243.3 9128 7982.3 6901.8 7388.5 8895.3 9747.5 7337.5 9897.3 11181.7 TRUE FALSE 7542.164048 8533.765541 7440.483716 7433.377832 7094.2004 9398.944199 9097.26206 7273.349011 10926.15975 12566.97341 0.600157556 0.67906291 0.59206648 0.591501039 0.564511451 0.747908338 0.723902388 0.578766961 0.869434461 1 13.61734962 -8.442248388 3.596241064 0.997819334 0.638117695 0.803751767 0.060770069 0.092884608 2.268127498 0.061568414 0.016273791 3.61E-09 8.442248388 -0.359701639 LS(ph)LDLSHR ddPTM_A459_MK2206_30min_R2 3 LSLDLSHR 8 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0J9YYG8;A0A0A0MSL1 Q8TDM6-4 DLG5 Disks large homolog 5 1 LS(1)LDLSHR;LS(1)LDLSHR;LS(1)LDLSHR 88.681 0.020327 6222100 134996 104276 98472 95691 79540 79302 106643 78754 77237 94789 TRUE FALSE 145331.3976 99097.80547 101755.0073 87872.7392 76416.85994 82319.89318 92640.646 89047.4182 83954.93465 91696.04269 1.584925514 1.080720635 1.109699005 0.958304597 0.833371405 0.897747501 1.010301462 0.971115171 0.915578603 1 16.48457185 -1.906844917 0.952752173 0.940706996 200 0.893987602 0.064762141 162.8127979 0.642928453 0.022037376 70147.06656 0.01239239 1.906844917 199.059293 LS(ph)LEGDHSTPPSAYGSVK ddPTM_A459_MK2206_30min_R2 2 LSLEGDHSTPPSAYGSVK 18 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LS(0.984)LEGDHS(0.011)T(0.005)PPSAYGSVK;LS(0.69)LEGDHS(0.297)T(0.013)PPSAYGSVK 147.49 0.00021817 118699000 688430 717540 713210 861140 688000 591340 898680 714300 615320 863330 TRUE FALSE 741136.7301 681908.007 736988.0654 790782.1073 660985.6631 613843.8581 780682.2365 807661.4626 668839.4214 835159.6128 0.887419265 0.816500219 0.882451754 0.946863444 0.791448309 0.735001847 0.934770102 0.967074377 0.80085221 1 19.67169242 -11.20820325 0.361606367 1.110162112 0.855856897 0.240497444 0.072147126 45.69876163 3.033109133 4.491989927 0.057209892 6.19E-12 11.20820325 -0.254305215 LS(ph)LGLSR ddPTM_A459_MK2206_30min_R2 1 LSLGLSR 7 0 Q9NR12-2;Q9NR12;D6RAN1;H0Y8W6;D6RF83;H7BYK4;D6RH06;Q9NR12-3;Q9NR12-5;Q9NR12-6;Q9NR12-4 Q9NR12-2 PDLIM7 PDZ and LIM domain protein 7 1 LS(1)LGLSR 99.013 0.019653 0 6883.7 6930.4 8567.4 9183.5 8970.6 7935.4 7930.9 7050.1 5650.6 8298.1 TRUE FALSE 7410.721365 6586.246414 8853.03284 8433.178673 8618.36917 8237.387208 6889.563303 7971.572277 6142.078974 8027.333677 0.923185912 0.820477468 1.102860949 1.050557883 1.073627872 1.026167285 0.858262978 0.993053559 0.765145591 1 12.97070515 -7.253833841 24.6074387 0.903536662 1.001734378 0.185146656 0.097938827 851.0509792 2753550.8 0.039430257 0.029936497 5.57E-08 7.253833841 0.098197717 LS(ph)LQGHPTDLQTSNVK ddPTM_A459_MK2206_30min_R2 2 LSLQGHPTDLQTSNVK 16 0 Q9P270;D6RIF6 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 LS(0.998)LQGHPT(0.002)DLQTSNVK;LS(0.999)LQGHPT(0.001)DLQTSNVK 113.05 0.0015477 16018900 119987 180134 123395 146789 178469 170383 158043 107342 117987 90699 TRUE FALSE 129173.297 171188.8075 127508.9277 134795.8691 171461.4103 176867.0445 137291.7643 121371.968 128249.296 87739.49906 1.472236545 1.951103087 1.453267104 1.53631911 1.954210044 2.015820085 1.564765764 1.383321871 1.461705359 1 16.42093885 -8.41046854 1.014738527 1.025215885 1.721984332 0.51977726 0.206337916 0.433482438 0.972839821 0.204585501 0.068756771 3.89E-09 8.41046854 0.696768446 LS(ph)LVIRSPSLLQSGAK ddPTM_A459_MK2206_30min_R1 1 LSLVIRSPSLLQSGAK 16 1 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 LS(0.898)LVIRS(0.101)PS(0.001)LLQSGAK 75.02 0.017327 8953800 2294.8 1795 2162.5 1838.5 2232.4 1917.5 1644.4 2143.5 1426.8 977.69 TRUE FALSE 2099.61521 1678.145174 2015.715525 1980.101589 2143.478781 2026.067193 1534.705076 2124.759605 1575.120966 1098.813618 1.910801954 1.527233687 1.834447163 1.802035901 1.950720982 1.843867931 1.396692806 1.933685176 1.433474194 1 10.10173098 -8.550227298 4.004925003 1.000550476 1.763647099 0.669916511 0.170481253 0.117577373 6.01011946 0.161266127 0.042258243 2.82E-09 8.550227298 0.763096623 LS(ph)NGSFSAPSLTNSR ddPTM_A459_MK2206_30min_R1 1 LSNGSFSAPSLTNSR 15 0 O94806;O94806-2 O94806 PRKD3 Serine/threonine-protein kinase D3 1 LS(0.992)NGS(0.008)FSAPSLTNSR 94.454 0.011455 14560000 843.47 712.27 812.96 745.05 1005.4 908.48 956.35 669.43 690.5 502.57 TRUE FALSE 771.7284473 665.9010935 757.7785402 802.4338801 965.352789 959.9173525 892.5536365 663.5772441 762.279946 564.8321658 1.366296918 1.178936211 1.341599481 1.420658965 1.709096697 1.699473597 1.580210354 1.174821981 1.349568938 1 9.141678439 -8.514826426 1.269904502 1.017003391 1.458886108 0.373923227 0.173638529 0.580554846 2.055571329 0.188174153 0.057953134 3.06E-09 8.514826426 0.441882717 LS(ph)NGSFSAPSLTNSR ddPTM_A459_MK2206_30min_R2 2 LSNGSFSAPSLTNSR 15 0 O94806;O94806-2 O94806 PRKD3 Serine/threonine-protein kinase D3 1 LS(0.999)NGSFSAPSLTNSR;LS(0.929)NGS(0.057)FS(0.007)APS(0.007)LTNSR 147.75 0.00031792 36483000 45114 58824 55099 55906 56431 47461 64679 48834 50035 51840 TRUE FALSE 48567.96253 55902.8857 56935.97316 51338.30097 54215.2354 49267.16161 56186.56961 55216.77147 54386.95386 50148.46505 0.968483532 1.114747693 1.135348273 1.023726268 1.081094613 0.982426113 1.120404574 1.101066033 1.084518814 1 15.61391792 LS(ph)NIFVIGK ddPTM_A459_MK2206_30min_R2 2 LSNIFVIGK 9 0 P62701 P62701 RPS4X "40S ribosomal protein S4, X isoform" 1 LS(1)NIFVIGK;LS(1)NIFVIGK 120.84 0.0064524 5640900 37494 30155.6 27922 30453.2 26794 23654.8 44031 27518 19477.6 31553 TRUE FALSE 40364.56947 28658.11675 28852.90554 27965.07615 25741.93293 24554.99999 38249.67681 31114.69708 21171.72644 30523.42819 1.322412712 0.938889189 0.945270805 0.916183987 0.843349992 0.804464028 1.253125192 1.019370986 0.693622168 1 14.89762938 -4.761437837 11.56203267 0.938226631 1.323083083 0.406911878 0.140293375 0.066573849 388.9916551 0.035693528 0.200084767 1.73E-05 4.761437837 0.384856452 LS(ph)PANQR ddPTM_A459_MK2206_30min_R2 2 LSPANQR 7 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 LS(1)PANQR;LS(1)PANQR 93.598 0.025499 81665000 75366 65521 71807 67217 73750 67812 80405 52877 61209 58766 TRUE FALSE 81136.07891 62267.32242 74201.00954 61725.15608 70854.20444 70392.63318 69847.72692 59788.20545 66532.84818 56848.47023 1.427234164 1.095320985 1.305241975 1.085783942 1.246369588 1.238250262 1.228665022 1.051711774 1.17035424 1 15.79483391 -14.52287853 0.040638848 0.013690297 1.761033536 0.388313821 0.096340211 884.3980541 2.673110568 104.574784 30.74300391 3.00E-15 14.52287853 1.747343238 LS(ph)PDFAEELR ddPTM_A459_MK2206_30min_R1 2 LSPDFAEELR 10 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 LS(1)PDFAEELR;LS(1)PDFAEELR 138.42 0.0016385 11993400 2458.7 2417.3 2421.03 1547.89 2364.7 2624.6 3193.9 2450.9 4364.1 5341.4 TRUE FALSE 2249.574654 2259.933331 2256.697229 1667.108756 2270.508992 2773.202584 2980.840759 2429.47204 4817.763812 6003.132958 0.374733438 0.376458983 0.375919915 0.277706452 0.378220674 0.461959214 0.496547516 0.404700688 0.802541581 1 12.55149991 -8.390273736 2.201763629 1.003248357 0.386890466 0.931463573 0.056295263 0.073852344 0.722026439 0.059417756 0.016648019 4.07E-09 8.390273736 -0.616357891 down LS(ph)PDFAEELR ddPTM_A459_MK2206_30min_R2 2 LSPDFAEELR 10 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 LS(1)PDFAEELR;LS(1)PDFAEELR 155.33 0.00052713 15096500 17015.7 11389.2 12297.6 11716.4 10283.1 10015.4 17523.6 11190.8 11264.2 15529.7 TRUE FALSE 18318.43507 10823.62889 12707.59585 10759.13264 9879.333826 10396.54307 15222.73027 12653.47598 12243.93975 15022.96716 1.219361986 0.720472113 0.845877896 0.716178936 0.657615351 0.692043253 1.013297181 0.842275421 0.815014745 1 13.87488216 -9.574901165 13.493495 0.999999999 0.82512267 0.081987203 0.161322894 0 0 0.155362611 0.037680968 2.66E-10 9.574901165 -0.174877329 LS(ph)PENNQVLTK ddPTM_A459_MK2206_30min_R1 2 LSPENNQVLTK 11 0 Q16514-2;Q16514 Q16514-2 TAF12 Transcription initiation factor TFIID subunit 12 1 LS(1)PENNQVLTK;LS(0.939)PENNQVLT(0.061)K 171.11 0.00032471 52876000 9815.7 11126.6 10207.2 6682.4 7553.2 7953.5 11188.6 8003 12185.1 14843 TRUE FALSE 8980.823171 10402.25632 9514.363703 7197.079606 7252.34005 8403.820297 10442.22891 7933.030615 13451.78475 16681.8629 0.538358529 0.623566827 0.570341799 0.431431408 0.434744015 0.503769894 0.625962998 0.475548244 0.806371856 1 14.02599279 -8.461666484 3.118567261 0.998197489 0.526592085 0.848238253 0.066221801 0.08681425 1.777491711 0.069096779 0.018439239 3.45E-09 8.461666484 -0.471605404 LS(ph)PENNQVLTK ddPTM_A459_MK2206_30min_R2 4 LSPENNQVLTK 11 0 Q16514-2;Q16514 Q16514-2 TAF12 Transcription initiation factor TFIID subunit 12 1 LS(1)PENNQVLTK;LS(1)PENNQVLTK;LS(1)PENNQVLTK;LS(1)PENNQVLTK 165.78 0.00056581 116027000 325787 224874 240124 263452 192305 165099 275055 228905 149298 278255 TRUE FALSE 350729.5032 213707.0842 248129.6143 241927.1289 184754.1394 171381.9581 238939.9481 258823.6694 162283.6702 269175.5621 1.302976765 0.793931969 0.921813304 0.898770776 0.686370404 0.636692116 0.887673258 0.961542227 0.602891544 1 18.03818791 -4.759746297 24.99195295 0.81755994 1.30297737 0.547052368 0.131514183 33.52198543 494676.0372 0.032654656 0.202873386 1.74E-05 4.759746297 0.485417431 LS(ph)PEPGR ddPTM_A459_MK2206_30min_R1 1 LSPEPGR 7 0 Q9NWK9-2;Q9NWK9 Q9NWK9-2 ZNHIT6 Box C/D snoRNA protein 1 1 LS(1)PEPGR 96.034 0.023406 22645000 8310.3 8108.3 8209.1 6239.9 6336.4 7058.7 8599.6 6551.7 9334.5 10797 TRUE FALSE 7603.465346 7580.448196 7651.889164 6720.498179 6084.00777 7458.357494 8025.936375 6494.419178 10304.85468 12134.61387 0.626593102 0.624696284 0.630583655 0.553828762 0.501376297 0.614634926 0.661408468 0.535197844 0.849211585 1 13.56684058 -8.445921357 3.498381181 0.997583552 0.594743187 0.8878505 0.048379042 0.066996298 1.585952656 0.04904332 0.012984805 3.58E-09 8.445921357 -0.402840365 LS(ph)PEPGREGVR ddPTM_A459_MK2206_30min_R1 1 LSPEPGREGVR 11 1 Q9NWK9-2;Q9NWK9 Q9NWK9-2 ZNHIT6 Box C/D snoRNA protein 1 1 LS(1)PEPGREGVR 110.87 0.040693 107640000 3468.2 3742.7 3705.9 3135.2 3851.1 3337.2 3354.3 3598 2815.4 3153.6 TRUE FALSE 3173.211378 3499.04955 3454.353833 3376.673647 3697.702532 3526.14938 3130.540767 3566.543065 3108.070905 3544.291776 0.895301961 0.987235186 0.974624566 0.952707582 1.043283896 0.994881235 0.883262712 1.006278064 0.87692298 1 11.79128166 -10.31408813 16.17080703 0.999998132 0.961346111 0.050036358 0.053258411 0 0 0.049995764 0.012125754 4.85E-11 10.31408813 -0.03865202 LS(ph)PEVAPPAHR ddPTM_A459_MK2206_30min_R1 2 LSPEVAPPAHR 11 0 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 LS(1)PEVAPPAHR;LS(1)PEVAPPAHR 84.892 0.023577 20022400 13821.8 15088.7 14218.9 11085.8 12302.4 12175.5 14457.5 10289.1 15938.2 16374.5 TRUE FALSE 12646.18333 14106.42289 13253.76068 11939.63024 11812.36936 12864.86629 13493.06655 10199.14348 17595.03293 18403.09668 0.687176922 0.766524413 0.720191874 0.648783759 0.64186857 0.699059865 0.733195439 0.554208004 0.956090881 1 14.16766093 -8.360191724 6.24427142 0.99250505 0.685815035 0.818170948 0.055983433 0.098367616 5.056910895 0.054042265 0.014033454 4.36E-09 8.360191724 -0.306690015 LS(ph)PEVAPPAHR ddPTM_A459_MK2206_30min_R2 5 LSPEVAPPAHR 11 0 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 LS(1)PEVAPPAHR;LS(1)PEVAPPAHR;LS(1)PEVAPPAHR;LS(1)PEVAPPAHR;LS(1)PEVAPPAHR 111.12 0.005575 107396100 677396 546889 560227 586597 496358 452174 675344 513944 408775 562632 TRUE FALSE 729257.9586 519731.2875 578904.6886 538670.1487 476868.4909 469381.7984 586670.5216 581118.2454 444329.5106 544273.3639 1.339874421 0.954908548 1.063628549 0.989705145 0.876156216 0.862400826 1.077896808 1.067695544 0.816371956 1 19.05397191 LS(ph)PEVQSVAESK ddPTM_A459_MK2206_30min_R2 2 LSPEVQSVAESK 12 0 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 LS(1)PEVQSVAESK;LS(1)PEVQSVAESK 191.63 0.00014396 10937100 90655 49031 58136 54635 38931 38881 59263 50537 34120 76473 TRUE FALSE 97595.6165 46596.19184 60074.22522 50171.14573 37402.37333 40360.6437 51481.69691 57142.35942 37087.69593 73977.69227 1.31925738 0.629868145 0.812058654 0.678192901 0.50558989 0.545578572 0.695908393 0.772426899 0.501336211 1 16.17480268 -4.75930213 24.99997731 0.66976979 1.319258212 0.630726231 0.145921667 34.83509756 407377.3016 0.03489559 0.223983007 1.74E-05 4.75930213 0.649488422 LS(ph)PEVQSVAESKGDEADDER ddPTM_A459_MK2206_30min_R2 1 LSPEVQSVAESKGDEADDER 20 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 LS(0.988)PEVQS(0.012)VAESKGDEADDER 72.793 0.0044929 3907300 14324 9632.2 12934 10357 9248.6 6095.9 12521 11634 7332.2 13951 TRUE FALSE 15420.65645 9153.878955 13365.2131 9510.79997 8885.453494 6327.883746 10876.97766 13154.60375 7969.941502 13495.78001 1.142628024 0.678277132 0.990325353 0.704723992 0.658387547 0.468878697 0.805953983 0.974719782 0.590550638 1 13.72022074 -5.772149851 24.88688003 0.729899307 0.91119687 0.179240726 0.186023289 352.964532 820149.6327 0.052010848 0.078038049 1.69E-06 5.772149851 0.181297562 LS(ph)PGEALPPVSQAGTGK ddPTM_A459_MK2206_30min_R2 2 LSPGEALPPVSQAGTGK 17 0 Q63HR2-6;Q63HR2;Q63HR2-4;Q63HR2-5;F8VV64;Q63HR2-2 Q63HR2-6 TNS2 Tensin-2 1 LS(1)PGEALPPVSQAGTGK;LS(1)PGEALPPVSQAGTGK 201.9 4.01E-08 7351800 120687 115491 129842 135085 121474 104538 142071 115444 90383 136563 TRUE FALSE 129926.8895 109755.8849 134170.8675 124048.1234 116704.3204 108516.2668 123416.907 130532.9272 98244.34996 132106.9605 0.983497683 0.830810765 1.015623 0.938997634 0.883407808 0.821427323 0.934219564 0.98808516 0.743672775 1 17.01134696 -4.42526666 16.20064873 0.90778765 3.872081488 0.07178998 0.083164654 1310543.945 2254341.596 0.019858424 139751601.6 3.76E-05 4.42526666 2.964293837 LS(ph)PGESAYQK ddPTM_A459_MK2206_30min_R1 2 LSPGESAYQK 10 0 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 LS(0.998)PGES(0.002)AYQK;LS(0.816)PGES(0.182)AY(0.001)QK 158.3 0.00047772 46613000 9192.1 9103.3 9031.7 7160.8 7914.8 7556.2 8714.4 7652.1 8633.8 7914.6 TRUE FALSE 8410.263625 8510.673515 8418.653368 7712.326057 7599.536756 7984.025514 8133.078276 7585.198496 9531.314406 8895.1204 0.945491826 0.956780025 0.94643501 0.867028855 0.854348948 0.897573631 0.914330319 0.852737024 1.071521686 1 13.11879842 -8.265753356 24.99946449 1.035760853 0.904689123 0.641036619 0.039336696 257.4989585 1492174.463 0.036247535 0.010626045 5.42E-09 8.265753356 -0.13107173 LS(ph)PGESAYQK ddPTM_A459_MK2206_30min_R2 3 LSPGESAYQK 10 0 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 LS(1)PGESAYQK;LS(1)PGESAYQK;LS(1)PGESAYQK 211.63 7.66E-05 83683000 298701 320470 289767 315531 294007 246292 296415 252056 253618 265204 TRUE FALSE 321569.7782 304555.9258 299427.6872 289751.108 282462.8079 255664.8146 257495.3544 285000.5846 275677.2352 256550.4152 1.253436982 1.187119208 1.167130004 1.129411963 1.101003121 0.996548045 1.00368325 1.110895043 1.074553845 1 17.96888283 -5.804836469 0.985303072 1.04263537 1.237123208 0.783289145 0.038159769 0.327521303 0.607982612 0.016709733 0.047624322 1.57E-06 5.804836469 0.194487838 LS(ph)PGSYPTVIQQQNATSQR ddPTM_A459_MK2206_30min_R2 2 LSPGSYPTVIQQQNATSQR 19 0 Q13469-5;Q13469-3;Q13469-4;Q13469-2;Q13469 Q13469-5 NFATC2 "Nuclear factor of activated T-cells, cytoplasmic 2" 1 LS(0.974)PGS(0.024)Y(0.001)PTVIQQQNATSQR;LS(0.993)PGS(0.007)YPTVIQQQNATSQR 152.59 1.61E-05 7405300 13011.1 22512.6 15195.9 25231 14269.9 18281 16555.7 13496.5 13086.3 17497.1 TRUE FALSE 14007.23982 21394.65702 15702.52372 23169.54659 13709.59203 18976.69627 14381.9167 15260.53889 14224.52272 16926.17106 0.82754923 1.263998629 0.927706784 1.368859295 0.809964166 1.121145249 0.84968518 0.901594273 0.840386327 1 14.04696803 -6.949484942 1.366807422 0.89337049 1.079480113 0.133986925 0.173717668 0.74039146 2.840450433 0.083953463 0.064220678 1.12E-07 6.949484942 0.186109623 LS(ph)PGTDSSSNLGGVK ddPTM_A459_MK2206_30min_R1 4 LSPGTDSSSNLGGVK 15 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;A0A1W2PRR3;I3L233;A0A1W2PPV8 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 LS(0.974)PGT(0.026)DSSSNLGGVK;LS(0.993)PGT(0.006)DSSSNLGGVK;LS(1)PGTDSSSNLGGVK;LS(0.946)PGT(0.054)DSSSNLGGVK 197.73 2.74E-05 58984200 14929.7 14928.8 16165 11883.4 11798.1 11872.2 14928.1 12422.8 14615 13258.1 TRUE FALSE 13659.85062 13956.93241 15067.76484 12798.66153 11328.15669 12544.3937 13932.27369 12314.18877 16134.28155 14900.61352 0.91673075 0.936668305 1.011217747 0.858935205 0.760247669 0.841870953 0.935013425 0.826421593 1.082793103 1 13.86308411 -8.265738801 24.99404396 1.041396564 0.886842341 0.45110656 0.068608388 387.4131975 2252123.481 0.063901104 0.018778104 5.42E-09 8.265738801 -0.154554223 LS(ph)PGTDSSSNLGGVK ddPTM_A459_MK2206_30min_R2 3 LSPGTDSSSNLGGVK 15 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;A0A1W2PRR3;I3L233;A0A1W2PPV8 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 LS(0.994)PGT(0.006)DSSSNLGGVK;LS(1)PGTDSSSNLGGVK;LS(0.899)PGT(0.101)DSSSNLGGVK 255.72 5.59E-29 71226000 216572 228407 210898 223691 231669 180013 239319 196643 169921 214712 TRUE FALSE 233152.9188 217064.6405 217929.2341 205414.7297 222572.511 186863.5209 207896.1278 222344.9153 184700.4214 207705.965 1.122514314 1.045057327 1.049219911 0.988968852 1.071574959 0.89965409 1.000915538 1.0704792 0.889239851 1 17.66418312 -1.522878756 0.432093205 0.980735778 3.754840134 0.3650618 0.056411075 91.93907096 1.150644906 0.035886973 222.3556698 0.029999999 1.522878756 2.774104355 LS(ph)PHKVQGR ddPTM_A459_MK2206_30min_R2 1 LSPHKVQGR 9 1 Q9GZP8;Q9GZP8-2;K7EQZ3 Q9GZP8 IMUP Immortalization up-regulated protein 1 LS(1)PHKVQGR 69.628 0.04167 223870000 131070 153300 151340 150580 153600 127580 160050 148470 116960 175430 TRUE FALSE 141104.82 145687.3449 156385.6001 138277.1323 147568.8922 132435.1463 139035.2427 167875.5388 127132.9694 169705.7335 0.831467606 0.858470377 0.92151041 0.814805307 0.869557493 0.780381096 0.819272513 0.989215481 0.749137739 1 17.37267578 -11.1036252 3.208359256 1.00669926 0.851607845 0.326463698 0.065246085 92826534.04 112172086.3 5318271.053 0.015571757 7.88E-12 11.1036252 -0.155091415 LS(ph)PIPEEVPK ddPTM_A459_MK2206_30min_R1 1 LSPIPEEVPK 10 0 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 LS(1)PIPEEVPK 117.09 0.0061317 60232000 4885.8 5525.9 5680.6 4032.8 4323.8 3944.5 5198.6 4262.7 5618.4 5989 TRUE FALSE 4470.237054 5166.162906 5295.016699 4343.406955 4151.57389 4167.834181 4851.810879 4225.431663 6202.452786 6730.962535 0.664130432 0.76752216 0.786665603 0.645287644 0.61678755 0.619203295 0.720819772 0.62776039 0.921480807 1 12.71659711 -8.38252013 4.181519997 0.994956734 0.683633329 0.790798997 0.058007477 0.104057237 2.838871717 0.060848892 0.016024256 4.14E-09 8.38252013 -0.311323404 LS(ph)PIPEEVPK ddPTM_A459_MK2206_30min_R2 4 LSPIPEEVPK 10 0 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 LS(1)PIPEEVPK;LS(1)PIPEEVPK;LS(1)PIPEEVPK;LS(1)PIPEEVPK 136.53 0.0018455 148107000 465760 402275 427753 427795 339130 279919 446934 354078 284870 431802 TRUE FALSE 501418.9437 382298.6085 442014.0715 392842.7801 325814.0522 290571.5137 388251.0289 400357.2103 309647.4777 417712.3361 1.200392951 0.915219819 1.058178161 0.940462481 0.779996242 0.695625886 0.929469866 0.958451967 0.741293591 1 18.67215023 -5.970568709 3.776957378 0.845159264 1.04247828 0.407962354 0.11096153 0.233725677 7.238646569 0.032631919 0.048389314 1.07E-06 5.970568709 0.197319016 LS(ph)PISHGNTIALFFR ddPTM_A459_MK2206_30min_R1 2 LSPISHGNTIALFFR 15 0 Q9BQ70 Q9BQ70 TCF25 Transcription factor 25 1 LS(0.997)PIS(0.003)HGNTIALFFR;LS(1)PISHGNTIALFFR 99.371 0.0054761 23021200 5465.5 4904.8 4964.6 4540.5 5109.9 4359.2 5642.3 5414 5129.1 5048.9 TRUE FALSE 5000.630525 4585.496629 4627.616784 4890.210097 4906.361863 4606.014137 5265.912462 5366.665969 5662.2883 5674.395849 0.881262192 0.808103056 0.8155259 0.861802776 0.864649205 0.811718861 0.928012885 0.945768697 0.997866284 1 12.47025108 -7.627983686 1.582012851 0.99469012 0.838977038 0.852112198 0.026688745 0.142218249 0.684215083 0.019066691 0.008359914 2.36E-08 7.627983686 -0.155713082 LS(ph)PLPVVSR ddPTM_A459_MK2206_30min_R1 3 LSPLPVVSR 9 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 LS(1)PLPVVSR;LS(1)PLPVVSR;LS(1)PLPVVSR 120.63 0.0065183 17767600 6323.2 6570.6 6168.2 4315.9 4732.4 5445.5 7685.1 5500.3 9368.6 13792 TRUE FALSE 5785.378636 6142.852746 5749.51977 4648.311366 4543.898487 5753.819504 7172.441001 5452.211457 10342.4995 15500.65708 0.373234412 0.39629628 0.370921035 0.299878343 0.293142314 0.371198426 0.462718513 0.351740667 0.667229746 1 13.92004175 -8.543022966 2.00438503 1.000531329 0.360981423 0.947418094 0.047391846 0.074837305 0.688625378 0.048624389 0.013585535 2.86E-09 8.543022966 -0.639549906 down LS(ph)PLPVVSR ddPTM_A459_MK2206_30min_R2 3 LSPLPVVSR 9 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 LS(1)PLPVVSR;LS(1)PLPVVSR;LS(0.998)PLPVVS(0.002)R 111.27 0.010373 32756300 136435 95382 107525 108056 94310 97716 112624 87283 79809 123543 TRUE FALSE 146880.5685 90645.46858 111109.8298 99227.47915 90606.91553 101434.6509 97836.33351 98691.18779 86750.64256 119511.802 1.229004718 0.758464579 0.929697552 0.830273475 0.758141991 0.848741707 0.818633238 0.825786124 0.725875111 1 16.86679357 -4.755345527 24.99715081 0.828066099 1.229005375 0.699489635 0.077841854 103.9960946 426553.322 0.018006987 0.161206207 1.76E-05 4.755345527 0.400939275 LS(ph)PPLPHEER ddPTM_A459_MK2206_30min_R2 1 LSPPLPHEER 10 0 Q9UPV0;Q9UPV0-2 Q9UPV0 CEP164 Centrosomal protein of 164 kDa 1 LS(1)PPLPHEER 89.44 0.0204 1730400 13007 13188 10782 12322 13555 11149 14702 8969.5 12411 14228 TRUE FALSE 14002.82592 12533.1031 11141.4665 11315.25318 13022.76259 11573.28301 12771.60974 10141.84445 13490.48635 13763.74153 1.017370596 0.91058838 0.809479492 0.822105905 0.946164425 0.840852975 0.927917 0.736852289 0.980146737 1 13.74858508 -8.493808883 24.86788722 1.000000151 0.875253128 0.268777489 0.075323842 687.4489397 588080.8532 0.071209093 0.018386109 3.21E-09 8.493808883 -0.124747023 LS(ph)PQQAFPR ddPTM_A459_MK2206_30min_R2 2 LSPQQAFPR 9 0 A0A1B0GVM0;A0A1B0GTT1;Q9BUH8 A0A1B0GVM0 BEGAIN Brain-enriched guanylate kinase-associated protein 1 LS(1)PQQAFPR;LS(1)PQQAFPR 98.156 0.019951 4315000 17246.9 22381 18996.4 23168 22420 18467.2 24391 15664.7 19892.5 19714.6 TRUE FALSE 18567.33592 21269.59209 19629.73049 21275.10029 21539.67815 19169.98224 21188.4324 17712.13007 21622.71369 19071.31422 0.973574014 1.115266197 1.02928043 1.115555019 1.129428098 1.005173635 1.111010608 0.92873149 1.133782048 1 14.21911664 LS(ph)PQQESSASSK ddPTM_A459_MK2206_30min_R2 1 LSPQQESSASSK 12 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 LS(1)PQQESSASSK 170.74 0.00029416 6068000 32395 22956 26546 21884 22269 20731 32054 23331 15552 34645 TRUE FALSE 34875.18611 21816.03842 27431.03039 20096.0072 21394.60717 21519.93273 27845.2713 26380.44181 16904.68485 33514.53649 1.04059879 0.650942567 0.818481568 0.599620621 0.638367986 0.642107425 0.830841605 0.787134318 0.504398587 1 15.03249936 -9.852429746 16.26387145 0.999999968 0.720757572 0.248489792 0.14412014 0 0 0.134738025 0.032678771 1.40E-10 9.852429746 -0.279242396 LS(ph)PSPSSR ddPTM_A459_MK2206_30min_R2 3 LSPSPSSR 8 0 Q03252;P20700 Q03252;P20700 LMNB2;LMNB1 Lamin-B2;Lamin-B1 1 LS(0.497)PS(0.493)PS(0.009)SR;LS(0.586)PS(0.322)PS(0.093)SR;LS(0.813)PS(0.185)PS(0.002)SR 120.31 0.0074507 789020000 2475410 2970960 2447650 3068360 3101140 3266600 3032420 2332430 2646050 3013210 TRUE FALSE 2664929.293 2823426.447 2529253.429 2817665.173 2979373.662 3390912.752 2634259.611 2637286.609 2876198.646 2914889.204 0.9142472 0.968622218 0.867701395 0.96664572 1.022122438 1.163307596 0.903725468 0.904763929 0.986726577 1 21.47500962 -5.99170244 23.62195939 0.995568332 0.921223444 0.200297912 0.071259996 185.1490965 527079.8195 0.021778468 0.032227712 1.02E-06 5.99170244 -0.074344888 LS(ph)PSPTSQR ddPTM_A459_MK2206_30min_R2 1 LSPSPTSQR 9 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LS(0.992)PS(0.007)PTSQR 136.52 0.0026332 2775300000 96183 100090 110090 128870 104700 100870 110200 101470 107350 116850 TRUE FALSE 103546.8444 95119.67614 113760.3457 118340.9088 100588.9519 104708.6785 95730.60763 114732.4774 116687.109 113037.1941 0.91604224 0.841490068 1.006397466 1.046920084 0.889874813 0.926320574 0.846894763 1.014997571 1.032289504 1 16.78643803 -7.886822737 12.27834622 1.018620303 0.928200789 0.321183564 0.060409209 0.579231086 59.65073402 0.035345492 0.01697499 1.30E-08 7.886822737 -0.090419514 LS(ph)PSWNPK ddPTM_A459_MK2206_30min_R2 3 LSPSWNPK 8 0 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 LS(0.998)PS(0.002)WNPK;LS(1)PSWNPK;LS(1)PSWNPK 150.35 0.0012966 48663700 361423 310821 319886 308524 276974 247788 338571 252552 220079 314301 TRUE FALSE 389093.8228 295386.0811 330550.8396 283316.6023 266098.6091 257217.746 294116.221 285561.4135 239221.0736 304045.3841 1.279722841 0.971519702 1.087175984 0.931823396 0.875193714 0.84598471 0.967343155 0.939206541 0.786793966 1 18.21392716 -1.522878745 0.674501499 0.901810851 38.13186152 0.668389404 0.075277179 147.2142074 0.864784816 0.029988826 8226.601833 0.03 1.522878745 37.23005067 LS(ph)PTFPESIEHPLAR ddPTM_A459_MK2206_30min_R1 2 LSPTFPESIEHPLAR 15 0 M9T4I7;Q5U5Q3 M9T4I7 MEX3C RNA-binding E3 ubiquitin-protein ligase MEX3C 1 LS(0.686)PT(0.314)FPESIEHPLAR;LS(0.993)PT(0.007)FPESIEHPLAR 145.79 0.00023544 8527900 2514.03 2564.83 2479.75 1644.51 1674.26 1912.05 2629.89 2104.7 3574 4168.4 TRUE FALSE 2300.198547 2397.859101 2311.431479 1771.170445 1607.570679 2020.308619 2454.454837 2086.29883 3945.53009 4684.812862 0.490990487 0.511836688 0.49338822 0.378066424 0.343145122 0.431246387 0.523917371 0.445332373 0.84219588 1 12.1937757 -8.372737742 2.907335189 0.997336796 0.448517862 0.919529848 0.056303902 0.069325664 1.092044901 0.059970279 0.01632108 4.24E-09 8.372737742 -0.548818934 down LS(ph)PTFPESIEHPLAR ddPTM_A459_MK2206_30min_R2 3 LSPTFPESIEHPLAR 15 0 M9T4I7;Q5U5Q3 M9T4I7 MEX3C RNA-binding E3 ubiquitin-protein ligase MEX3C 1 LS(0.993)PT(0.007)FPESIEHPLAR;LS(0.739)PT(0.261)FPESIEHPLAR;LS(0.995)PT(0.005)FPESIEHPLAR 170.47 3.63E-06 7195300 33178.2 30442.2 32458.3 36670.4 30884.5 32364.1 35783.9 31001.1 25076.6 38439.4 TRUE FALSE 35718.3485 28930.48462 33540.44352 33674.31102 29671.81935 33595.7385 31085.43095 35053.05021 27257.71734 37185.12553 0.960554738 0.778012289 0.901985486 0.905585514 0.797948613 0.903472505 0.835964126 0.942663221 0.733027439 1 15.18243802 -10.99248725 4.638795681 1.000474487 0.863037457 0.255158645 0.070649535 0.000315234 3.60E-05 0.06219958 0.015033918 1.02E-11 10.99248725 -0.137437029 LS(ph)PTSLVHPVMSTLPELSCK ddPTM_A459_MK2206_30min_R2 3 LSPTSLVHPVMSTLPELSCK 20 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 LS(0.529)PT(0.235)S(0.235)LVHPVMSTLPELSCK;LS(0.933)PT(0.034)S(0.034)LVHPVMSTLPELSCK;LS(0.925)PT(0.037)S(0.037)LVHPVMSTLPELSCK 150.36 9.31E-06 165278500 826479 840507 762114 943018 887009 864429 1128736 845379 680870 981935 TRUE FALSE 889754.8677 798768.6446 787522.5004 865970.4128 852180.5698 897325.4513 980531.6073 955872.9379 740090.8419 949894.5414 0.936688052 0.840902447 0.829063087 0.911649004 0.897131769 0.944657972 1.032253124 1.006293748 0.779129482 1 19.85740783 -6.570419304 2.048055476 0.958165421 0.872333878 0.194320578 0.070817802 0.511777638 4.353155202 0.026792298 0.028039657 2.69E-07 6.570419304 -0.085831543 LS(ph)RPST(ph)THT(ph)FRS(ph)DT(ph)PR ddPTM_A459_MK2206_30min_R2 1 LSRPSTTHTFRSDTPR 16 2 H0Y909;A5PLN7-3 H0Y909 FAM149A Protein FAM149A 5 LS(0.512)RPS(0.512)T(0.564)T(0.564)HT(0.852)FRS(0.996)DT(0.998)PR 48.188 0.036459 4962500 14643 13626 12241 13707 12915 14361 16479 6031.2 11813 12613 TRUE FALSE 15764.07934 12949.35265 12649.10883 12587.09425 12407.89221 14907.51792 14315.28751 6819.498548 12840.47339 12201.43884 1.291985277 1.061297181 1.036689934 1.031607372 1.016920411 1.221783604 1.173245852 0.558909374 1.052373704 1 13.57476367 -7.708927169 24.99997604 0.854224012 1.110342041 0.368900663 0.148274259 93.26265521 44400.18504 0.066984521 0.038673471 1.95E-08 7.708927169 0.256118029 LS(ph)SAGPR ddPTM_A459_MK2206_30min_R1 1 LSSAGPR 7 0 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 LS(0.5)S(0.5)AGPR 95.815 0.023547 5127400 3481.1 3361.4 2930.9 2861.2 2871.9 2628.5 3386.4 3208.3 991.86 3305.6 TRUE FALSE 3185.014165 3142.572249 2731.958674 3081.57012 2757.506142 2777.323398 3160.499435 3180.250171 1094.967396 3715.122684 0.857310629 0.845886534 0.73536163 0.829466583 0.742238245 0.747572458 0.850711996 0.856028304 0.2947325 1 11.85919414 -4.307516057 0.481162278 0.739463154 1.012655053 0.042403196 0.172776131 26.92317009 3.421781833 0.106993838 4.583108856 4.93E-05 4.307516057 0.273191899 LS(ph)SAGPR ddPTM_A459_MK2206_30min_R2 4 LSSAGPR 7 0 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 LS(0.5)S(0.5)AGPR;LS(0.5)S(0.5)AGPR;LS(0.5)S(0.5)AGPR;LS(0.5)S(0.5)AGPR 131.03 0.0040825 23255000 121246 128962 123816 127400 110165 131004 127691 104992 114821 126544 TRUE FALSE 130528.687 122557.9346 127943.9636 116991.0125 105839.3686 135989.449 110925.0183 118714.8149 124807.923 122414.8796 1.066281218 1.001168608 1.045166764 0.955692746 0.864595618 1.110889864 0.906139994 0.969774387 1.019548632 1 16.9014194 -5.758515741 24.97915972 0.972138481 1.033901848 0.16497606 0.063812258 137.8910314 1178092.542 0.017170472 0.028151323 1.74E-06 5.758515741 0.061763367 LS(ph)SATANALYSSNLR ddPTM_A459_MK2206_30min_R1 1 LSSATANALYSSNLR 15 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LS(0.602)S(0.395)AT(0.003)ANALYSSNLR 135.86 0.00040804 24122000 2928.6 2599.2 2645.3 1838.8 2490.5 1867.3 1728.1 1669.1 1873.7 1857.1 TRUE FALSE 2679.507191 2429.991608 2465.744406 1980.424695 2391.298111 1973.024912 1612.821602 1654.507235 2068.47782 2087.171568 1.283798243 1.16425101 1.181380795 0.948855726 1.145712287 0.945310363 0.772730726 0.792703034 0.991043502 1 11.02733348 -5.917282637 0.713373435 0.877344211 1.278703964 0.619694774 0.098836449 0.626379105 0.597981735 0.055660618 0.161666419 1.21E-06 5.917282637 0.401359753 LS(ph)SDLTR ddPTM_A459_MK2206_30min_R1 1 LSSDLTR 7 0 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2;Q7Z6E9-4 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LS(0.958)S(0.042)DLTR 106.68 0.019363 0 2546.6 2551.8 2559.8 2342 2478.7 2438.8 2842.9 2048.9 2841.3 3087.4 TRUE FALSE 2329.998297 2385.677356 2386.047908 2522.381246 2379.96813 2576.882748 2653.255328 2030.986683 3136.663303 3469.890421 0.671490455 0.6875368 0.687643591 0.726933978 0.685891438 0.742640959 0.764651043 0.58531724 0.903966098 1 11.76067439 -8.450836583 4.955219709 0.998609499 0.699115223 0.836917208 0.046396678 0.067767564 2.913152041 0.043230243 0.011254794 3.54E-09 8.450836583 -0.299494276 LS(ph)SDLTR ddPTM_A459_MK2206_30min_R2 1 LSSDLTR 7 0 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2;Q7Z6E9-4 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LS(0.952)S(0.048)DLTR 80.455 0.04486 4969400 44323 40189 40497 36555 33247 31122 39183 32874 30955 30932 TRUE FALSE 47716.40296 38193.2727 41847.14977 33568.33957 31941.55573 32306.36952 34038.22503 37170.74467 33647.40995 29922.69137 1.594656121 1.27639831 1.398508886 1.121835571 1.067469344 1.079661221 1.137538887 1.242225982 1.12447806 1 14.86895232 -4.044475279 0.663161123 1.113508141 2.502136217 0.741809833 0.08658359 4.12605916 0.67266501 0.038255865 5.408966421 9.03E-05 4.044475279 1.388628076 LS(ph)SDSFAR ddPTM_A459_MK2206_30min_R1 3 LSSDSFAR 8 0 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 LS(0.958)S(0.042)DS(0.001)FAR;LS(0.962)S(0.037)DS(0.002)FAR;LS(0.953)S(0.045)DS(0.002)FAR 126.31 0.0048677 33631700 8882.6 8654.1 7644.9 6477.6 8048.4 8476 9873.8 8184 9970.5 10505.6 TRUE FALSE 8127.088226 8090.716517 7125.985488 6976.505874 7727.815185 8955.903795 9215.136818 8112.448151 11006.96915 11807.11304 0.68832137 0.685240879 0.603533265 0.590873133 0.654505056 0.758517663 0.780473329 0.687081433 0.932232047 1 13.52736863 -8.241737334 0.637647516 1.008190309 0.642996311 0.801939385 0.056842987 0.325415733 0.306166992 0.058975051 0.026707676 5.73E-09 8.241737334 -0.365193998 LS(ph)SDSFAR ddPTM_A459_MK2206_30min_R2 3 LSSDSFAR 8 0 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 LS(0.96)S(0.039)DS(0.001)FAR;LS(0.984)S(0.015)DS(0.001)FAR;LS(0.64)S(0.358)DS(0.002)FAR 137.95 0.0024986 34587500 226480 130118 143559 145864 128919 135235 234222 141321 135609 177962 TRUE FALSE 243819.4829 123656.5293 148345.1854 133946.4446 123856.9923 140381.4627 203468.37 159792.1399 147404.0257 172155.1145 1.416277893 0.71828554 0.861694907 0.778056725 0.719449972 0.815435911 1.181889778 0.928187004 0.856227979 1 17.39334952 -10.78189616 17.09954933 0.999999997 0.906750498 0.009924405 0.208773277 0 0 0.199612417 0.048413122 1.65E-11 10.78189616 -0.093249499 LS(ph)SGFDDIDLPSAVK ddPTM_A459_MK2206_30min_R1 2 LSSGFDDIDLPSAVK 15 0 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 LS(0.624)S(0.376)GFDDIDLPSAVK;LS(0.919)S(0.081)GFDDIDLPSAVK 227.91 9.83E-14 107851000 11965.9 8524.8 9537.6 7754 7565.9 5883.1 8635.4 9752.1 7801.9 8540.4 TRUE FALSE 10948.13737 7969.833971 8890.214285 8351.214424 7264.534182 6216.196038 8059.348222 9666.838418 8612.935424 9598.449229 1.140615229 0.830325168 0.926213607 0.870058717 0.75684457 0.647625037 0.839651076 1.007125025 0.897325726 1 13.22858562 -10.85770015 14.80675279 0.999976412 0.871329303 0.072025885 0.126680822 8.83E-11 0 0.128668272 0.03120664 1.39E-11 10.85770015 -0.128647109 LS(ph)SGFDDIDLPSAVK ddPTM_A459_MK2206_30min_R2 3 LSSGFDDIDLPSAVK 15 0 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 LS(0.631)S(0.369)GFDDIDLPSAVK;LS(0.569)S(0.431)GFDDIDLPSAVK;LS(0.873)S(0.127)GFDDIDLPSAVK 226.39 1.17E-13 22547600 72383 78510 80786 77023 73458 57976 83255 57140 53152 79950 TRUE FALSE 77924.69813 74611.30756 83479.36492 70729.97452 70573.66982 60182.31731 72323.51849 64608.39419 57775.06488 77341.23805 1.007543971 0.964702783 1.079364218 0.914518261 0.912497286 0.778140082 0.935122327 0.835367985 0.747014999 1 16.23895024 -6.097246897 2.349539139 0.85624399 1.010807572 0.428125064 0.075212448 0.269669522 2.929114094 0.023128995 0.033098736 7.99E-07 6.097246897 0.154563582 LS(ph)SPIDMTSK ddPTM_A459_MK2206_30min_R2 1 LSSPIDMTSK 10 0 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 LS(0.792)S(0.208)PIDMTSK 123.67 0.0040806 4037200 92857 91180 66782 76291 49078 47241 58445 42357 32686 52715 TRUE FALSE 99966.20331 86652.13379 69008.47855 70057.78126 47150.95112 49038.78936 50771.10129 47893.20533 35528.9692 50994.91387 1.960317132 1.699230908 1.353242379 1.373818994 0.924620664 0.961640792 0.99561108 0.93917612 0.696715937 1 15.63806574 -5.098973229 0.602934616 0.869712323 2.429028329 0.924121431 0.103649482 0.643499119 0.230681468 0.055034456 0.661472251 7.96E-06 5.098973229 1.559316006 LS(ph)SPVLHR ddPTM_A459_MK2206_30min_R1 2 LSSPVLHR 8 0 Q16643-3;Q16643;Q16643-2;D6R9W4;D6RCR4 Q16643-3 DBN1 Drebrin 1 LS(0.649)S(0.351)PVLHR;LS(0.5)S(0.5)PVLHR 112.11 0.0074837 391217000 13931.9 12847.5 12420.4 10328.7 13790.6 11373.4 13482.8 11842.8 10213.1 10102.4 TRUE FALSE 12746.91875 12011.12541 11577.33785 11124.21826 13241.2912 12017.35208 12583.38701 11739.25965 11274.78829 11353.96158 1.122684682 1.057879695 1.019673862 0.979765361 1.166226529 1.058428108 1.108281627 1.033935122 0.993026814 1 13.47090814 -8.005656803 5.30359935 1.000678084 1.070266916 0.278996645 0.04952551 0.249030709 22.35149495 0.032401253 0.013413388 9.87E-09 8.005656803 0.069588832 LS(ph)SPVLHR ddPTM_A459_MK2206_30min_R2 6 LSSPVLHR 8 0 Q16643-3;Q16643;Q16643-2;D6R9W4;D6RCR4 Q16643-3 DBN1 Drebrin 1 LS(0.621)S(0.379)PVLHR;LS(0.566)S(0.434)PVLHR;LS(0.609)S(0.391)PVLHR;LS(0.628)S(0.372)PVLHR;LS(0.5)S(0.5)PVLHR;LS(0.588)S(0.412)PVLHR 128.6 0.0028359 905792500 793160 1015059 867170 1204120 871868 943878 1064667 852112 897788 905756 TRUE FALSE 853884.9394 964652.6461 896081.015 1105739.544 837634.0815 979797.9387 924874.944 963485.9641 975875.9774 876201.2559 0.974530604 1.100948714 1.022688576 1.261969823 0.955983658 1.11823389 1.055550808 1.099617191 1.113757793 1 19.74090276 -4.756103122 24.72966044 1.084384231 0.974530406 0.139414652 0.078928324 280.6037007 1300230.594 0.018199079 0.151263165 1.75E-05 4.756103122 -0.109853825 LS(ph)STDDGYIDLQFK ddPTM_A459_MK2206_30min_R1 1 LSSTDDGYIDLQFK 14 0 Q96A57-2;Q5JWB9;A0A087WTT2;Q96A57 Q96A57-2 TMEM230 Transmembrane protein 230 1 LS(0.492)S(0.492)T(0.017)DDGYIDLQFK 154.1 0.00035062 2420300 1239.4 1186.4 1033.9 812.42 1391.2 843.76 688.55 854.74 834.86 904.51 TRUE FALSE 1133.982522 1109.165144 963.7217486 874.9927292 1335.785558 891.532962 642.6180858 847.2670983 921.6466846 1016.567528 1.115501421 1.091088506 0.948015476 0.860732519 1.314015569 0.877003188 0.632145006 0.833458748 0.906626131 1 9.989490337 -6.980767236 24.99914816 0.818521127 1.053945832 0.36749642 0.140361613 249.5021102 324307.0051 0.049485031 0.04363603 1.05E-07 6.980767236 0.235424705 LS(ph)STDDGYIDLQFK ddPTM_A459_MK2206_30min_R2 2 LSSTDDGYIDLQFK 14 0 Q96A57-2;Q5JWB9;A0A087WTT2;Q96A57 Q96A57-2 TMEM230 Transmembrane protein 230 1 LS(0.494)S(0.494)T(0.011)DDGYIDLQFK;LS(0.498)S(0.498)T(0.004)DDGYIDLQFK 180.3 2.06E-10 0 17788.4 16175.8 16211 17201.5 15412 14028.7 19019 10829.2 12778.9 19214.6 TRUE FALSE 19150.29358 15372.53329 16751.46665 15796.08243 14806.84744 14562.57201 16521.78245 12244.61362 13890.38562 18587.62918 1.030270908 0.827030341 0.901215883 0.849816955 0.796596882 0.783455053 0.888859052 0.658750694 0.747291948 1 14.18205515 -1.522878746 0.659299688 0.801473265 20.23469357 0.2911003 0.089911023 277.8537956 1.730796238 0.036239262 7897.208811 0.03 1.522878746 19.4332203 LS(ph)TASEETVQNR ddPTM_A459_MK2206_30min_R2 2 LSTASEETVQNR 12 0 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 LS(0.765)T(0.224)AS(0.012)EETVQNR;LS(0.857)T(0.143)ASEETVQNR 182.72 0.00010424 10024100 23054 22152.3 16368.9 22133 22312.4 13737.6 17719.7 9669.8 15943.1 12408.8 TRUE FALSE 24819.03197 21052.24899 16914.63096 20324.6631 21436.30307 14260.39399 15393.0821 10933.67606 17329.80202 12003.90187 2.067580378 1.75378383 1.409094404 1.69317138 1.785777932 1.187979887 1.282339882 0.910843506 1.443680747 1 13.55121581 -6.766990309 24.36736678 1.166732047 1.721348555 0.670870838 0.201785047 63.381872 278230.104 0.070525677 0.063980327 1.71E-07 6.766990309 0.554616507 LS(ph)TGSFPEDLLESDSSR ddPTM_A459_MK2206_30min_R1 2 LSTGSFPEDLLESDSSR 17 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 LS(0.333)T(0.333)GS(0.333)FPEDLLESDSSR;LS(0.899)T(0.091)GS(0.01)FPEDLLESDSSR 293.77 4.49E-76 10037000 2703.6 2806.5 3059.8 2531.7 2436.41 2259 2291.16 1862.81 2562.67 2203.11 TRUE FALSE 2473.644623 2623.79634 2852.109301 2726.691973 2339.362631 2386.902628 2138.320897 1846.523649 2829.068717 2476.047899 0.99902939 1.059671075 1.151879696 1.101227474 0.944797001 0.963996952 0.863602395 0.745754413 1.142574309 1 11.27382351 -6.318929553 4.928852404 0.926081011 1.082012823 0.288122181 0.101499078 0.248168099 12.84144118 0.031848132 0.036769105 4.80E-07 6.318929553 0.155931812 LS(ph)TGSFPEDLLESDSSR ddPTM_A459_MK2206_30min_R2 1 LSTGSFPEDLLESDSSR 17 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 LS(0.743)T(0.126)GS(0.131)FPEDLLESDSSR 195.28 9.31E-08 1903900 11594 11403 10647 11911 7576.5 8601.1 10926 6506.5 7280.1 8838 TRUE FALSE 12481.64555 10836.7436 11001.96567 10937.8332 7279.008541 8928.420888 9491.403076 7356.92189 7913.309939 8549.616784 1.459907019 1.267512203 1.286837287 1.279336077 0.851384188 1.044306559 1.110155381 0.860497269 0.925574811 1 13.06164404 -6.172575916 5.742101763 0.970119999 1.322080686 0.797697766 0.088451563 0.107701556 5.527877464 0.027208363 0.035330151 6.72E-07 6.172575916 0.351960687 LS(ph)TGTTVEDVQK ddPTM_A459_MK2206_30min_R1 3 LSTGTTVEDVQK 12 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 LS(0.972)T(0.026)GT(0.002)TVEDVQK;LS(0.543)T(0.277)GT(0.041)T(0.139)VEDVQK;LS(0.655)T(0.197)GT(0.14)T(0.008)VEDVQK 161.25 0.0004804 28058000 10508.8 11335 11338.2 7376.8 7701.1 6797.8 6999.9 6266.4 6903 7296.9 TRUE FALSE 9614.971376 10597.08944 10568.59457 7944.962414 7394.34888 7182.685561 6532.949443 6211.613525 7620.591553 8200.895061 1.17242951 1.292186933 1.288712329 0.968792108 0.901651445 0.875841662 0.796614198 0.757431168 0.929239003 1 13.00156566 -5.887016675 3.284121416 0.863841509 1.257172748 0.843407009 0.071853655 0.086215967 1.835411736 0.021582673 0.034102134 1.30E-06 5.887016675 0.393331239 LS(ph)TGTTVEDVQK ddPTM_A459_MK2206_30min_R2 3 LSTGTTVEDVQK 12 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 LS(0.999)T(0.001)GTTVEDVQK;LS(0.846)T(0.153)GT(0.001)TVEDVQK;LS(0.997)T(0.003)GTTVEDVQK 217.46 4.78E-08 55303000 196710 212256 200215 177973 154283 106765 130277 98823 82845 114658 TRUE FALSE 211770.2688 201715.6757 206890.0682 163432.0366 148225.0742 110828.0169 113171.4734 111739.5054 90050.70835 110916.7189 1.90927275 1.818622817 1.865273967 1.473466203 1.336363677 0.999200283 1.020328356 1.007418057 0.811876778 1 16.75911732 -6.237425733 1.038250936 0.938380977 1.913314539 0.964179517 0.074940685 0.084322512 0.190336361 0.031905911 0.050357079 5.79E-07 6.237425733 0.974933562 LS(ph)TIQNSPTK ddPTM_A459_MK2206_30min_R1 1 LSTIQNSPTK 10 0 Q5VYV7 Q5VYV7 SLX4IP Protein SLX4IP 1 LS(0.438)T(0.25)IQNS(0.294)PT(0.018)K 142.19 0.0012261 22578000 4649.6 5441.5 5130.8 4149.2 3805.9 3485 3943.8 3831.3 4101.3 3754.2 TRUE FALSE 4254.127104 5087.257361 4782.535591 4468.772103 3654.302944 3682.317688 3680.716298 3797.803348 4527.644812 4219.298639 1.008254563 1.205711611 1.133490658 1.059126761 0.866092509 0.872732177 0.872352638 0.900102997 1.073079959 1 12.04278749 -6.081708794 4.13510135 0.920572953 1.122053267 0.551832498 0.076163407 0.159625268 5.026460873 0.023041834 0.031036255 8.28E-07 6.081708794 0.201480314 LS(ph)TPGAR ddPTM_A459_MK2206_30min_R2 1 LSTPGAR 7 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 LS(0.5)T(0.5)PGAR 89.296 0.03115 4563100 44457 55881 49671 56499 60280 47810 62831 42551 44626 47703 TRUE FALSE 47860.6621 53106.0308 51327.00635 51882.85097 57913.10432 49629.44305 54581.21423 48112.5618 48507.48881 46146.45502 1.037147102 1.15081496 1.112263257 1.124308486 1.254984902 1.075476828 1.182782387 1.042605803 1.051163926 1 15.4939322 -7.840172036 7.5464714 1.033535148 1.135706808 0.407737452 0.056724331 0.243559965 19.8789972 0.030399043 0.014544676 1.44E-08 7.840172036 0.102171661 LSAS(ph)PAQEK ddPTM_A459_MK2206_30min_R2 2 LSASPAQEK 9 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LS(0.007)AS(0.993)PAQEK;LS(0.056)AS(0.944)PAQEK 112.94 0.0062578 8819700 123710 123626 107599 116405 126363 106888 135041 110105 103789 124080 TRUE FALSE 133181.3327 117486.9126 111186.297 106894.3391 121401.3537 110955.6977 117309.9545 124496.1015 112816.3796 120031.2798 1.109555217 0.978802466 0.926311018 0.890554024 1.011414307 0.924389859 0.977328199 1.037197152 0.9398915 1 16.87305089 -7.533585282 24.91503637 0.994579127 0.967995019 0.014037907 0.060426664 902.4471006 2100044.956 0.028911392 0.016711569 2.93E-08 7.533585282 -0.026584108 LSASTAS(ph)ELSPK ddPTM_A459_MK2206_30min_R2 1 LSASTASELSPK 12 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;H0YF21 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 LSAST(0.01)AS(0.547)ELS(0.443)PK 82.705 0.035828 85715000 115900 111230 109310 82905 91326 71041 140370 94303 68547 115620 TRUE FALSE 124773.3931 105706.4799 112954.3408 76131.3963 87740.08236 73744.51504 121939.2504 106628.7259 74509.09416 111847.3289 1.115568824 0.94509615 1.009897527 0.680672458 0.784462921 0.659331928 1.090229437 0.953341729 0.666167846 1 16.77117128 -5.654081388 10.95546713 0.832976883 1.016986919 0.267971286 0.1438706 0.53036811 50.65549901 0.040038316 0.069369605 2.22E-06 5.654081388 0.184010037 LSASTASELS(ph)PK ddPTM_A459_MK2206_30min_R1 3 LSASTASELSPK 12 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;H0YF21 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 LSASTASELS(1)PK;LSAS(0.001)TAS(0.003)ELS(0.996)PK;LSASTASELS(1)PK 209.67 6.83E-06 197986000 13758 16555.2 15735.5 14428.4 8674.4 7439.4 9519.3 11238.7 13368.6 11534.4 TRUE FALSE 12587.80985 15477.45347 14667.4181 15539.67787 8328.88028 7860.612399 8884.284866 11140.44123 14758.31381 12963.36855 0.971029235 1.193937626 1.131451138 1.198737643 0.642493519 0.606371127 0.685337675 0.859378578 1.138462873 1 13.66215303 -6.252285661 24.9935308 0.797360933 1.129346848 0.444610556 0.16380645 609.3604696 1663811.523 0.051528925 0.065553084 5.59E-07 6.252285661 0.331985915 LSASTASELS(ph)PK ddPTM_A459_MK2206_30min_R2 3 LSASTASELSPK 12 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;H0YF21 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 LSAST(0.002)AS(0.379)ELS(0.619)PK;LSASTAS(0.002)ELS(0.998)PK;LSAS(0.062)T(0.003)AS(0.01)ELS(0.925)PK 149.82 0.00056572 199498000 262710 209160 225181 196595 223377 153228 281839 193330 157658 238059 TRUE FALSE 282823.2796 198773.4185 232688.4222 180532.5596 214606.0966 159059.1989 244833.2008 218598.8948 171370.8079 230291.1543 1.228111781 0.863139616 1.010409726 0.783931802 0.931890316 0.690687401 1.063146353 0.94922836 0.74414846 1 17.81309947 -4.758461406 24.9597938 0.891844988 1.228112247 0.428641969 0.116079133 76.20770383 638616.5009 0.027582572 0.188732203 1.74E-05 4.758461406 0.336267259 LSCS(ph)ELSLYQPLQNSSK ddPTM_A459_MK2206_30min_R1 2 LSCSELSLYQPLQNSSK 17 0 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 LS(0.001)CS(0.998)ELS(0.001)LYQPLQNSSK;LS(0.008)CS(0.968)ELS(0.024)LYQPLQNSSK 281.65 8.41E-64 16982600 2497 2864 2485.1 2137.6 2538.4 2282.3 2537.2 2325.1 2283.7 2214.4 TRUE FALSE 2284.617038 2677.553079 2316.418336 2302.238322 2437.290153 2411.521854 2367.948017 2304.771896 2521.098787 2488.73659 0.917982661 1.075868411 0.93076075 0.925063075 0.979328292 0.968974324 0.951465907 0.926081091 1.013003464 1 11.28119783 -8.289670319 24.31558456 1.006501764 0.961934473 0.154803533 0.04367575 1175.777817 1012694.346 0.041327696 0.010681395 5.13E-09 8.289670319 -0.044567291 LSCS(ph)ELSLYQPLQNSSK ddPTM_A459_MK2206_30min_R2 1 LSCSELSLYQPLQNSSK 17 0 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 LS(0.011)CS(0.911)ELS(0.073)LY(0.005)QPLQNSSK 105.5 0.0026482 4651900 25988 28932 32962 24942 30679 31155 32257 21735 26798 30955 TRUE FALSE 27977.66126 27495.27895 34060.93663 22904.15881 29474.38831 32340.62536 28021.61715 24575.83913 29128.8416 29944.94089 0.934303439 0.918194464 1.137452125 0.76487574 0.984286074 1.080002979 0.93577133 0.820700873 0.972746672 1 14.87002466 -7.515289085 24.91373614 0.91368149 0.969913632 0.022907187 0.102938744 1145.848751 3761389.555 0.04594395 0.028004746 3.05E-08 7.515289085 0.056232141 LSCS(ph)LEDLR ddPTM_A459_MK2206_30min_R1 4 LSCSLEDLR 9 0 E9PI79;H0YDJ2;E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 E9PI79;H0YDJ2 PPFIBP2 Liprin-beta-2 1 LS(0.013)CS(0.987)LEDLR;LS(0.008)CS(0.992)LEDLR;LS(0.024)CS(0.976)LEDLR;LS(0.007)CS(0.993)LEDLR 149.94 0.0013723 83927000 15886.8 15932.7 15766 11950.3 15414 15808.3 18861.2 13884.9 19256.9 20541.3 TRUE FALSE 14535.54424 14895.47833 14695.84785 12870.71418 14800.02774 16703.35228 17603.00376 13763.50578 21258.72367 23086.11132 0.629622895 0.645213831 0.63656662 0.557508971 0.641079285 0.723523856 0.762493237 0.59618121 0.920844718 1 14.49473756 -8.487702953 0.723083242 1.010773211 0.628657315 0.750336716 0.068598753 0.365118968 0.436020914 0.06706291 0.026275284 3.25E-09 8.487702953 -0.382115896 LSCS(ph)LEDLR ddPTM_A459_MK2206_30min_R2 4 LSCSLEDLR 9 0 E9PI79;H0YDJ2;E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 E9PI79;H0YDJ2 PPFIBP2 Liprin-beta-2 1 LS(0.014)CS(0.986)LEDLR;LS(0.018)CS(0.982)LEDLR;LS(0.011)CS(0.989)LEDLR;LS(0.013)CS(0.987)LEDLR 152.69 0.0010799 67931000 250317 204661 211270 243917 199417 214439 249775 198974 180611 254813 TRUE FALSE 269481.462 194497.8323 218313.6364 223988.2008 191586.8866 222599.6264 216979.2425 224980.585 196320.2183 246498.4727 1.093237857 0.789042748 0.885659185 0.908679873 0.777233565 0.903046676 0.880245789 0.912705797 0.796435841 1 17.91121918 -4.748339495 24.9989755 0.869584982 1.093238394 0.508688273 0.065003278 498.0182112 950329.8581 0.014970686 0.275885554 1.79E-05 4.748339495 0.223653412 LSCS(ph)LEDLRSESVDK ddPTM_A459_MK2206_30min_R2 1 LSCSLEDLRSESVDK 15 1 E9PI79;H0YDJ2;E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 E9PI79;H0YDJ2 PPFIBP2 Liprin-beta-2 1 LS(0.253)CS(0.746)LEDLRSES(0.001)VDK 63.374 0.039873 10793000 23980 51218 45367 55696 48813 42726 59438 33274 45314 40926 TRUE FALSE 25815.92724 48674.5886 46879.51314 51145.45864 46896.35635 44351.96787 51633.7192 37623.02605 49255.32981 39590.58797 0.652072337 1.22944849 1.184107525 1.291859032 1.18453296 1.12026545 1.304191775 0.950302281 1.244117159 1 15.27286987 -4.75771363 24.95963348 1.173804176 0.65207158 0.661535323 0.110556222 60.495446 405212.1763 0.025962263 0.18875387 1.75E-05 4.75771363 -0.521732597 LSDDFDS(ph)PVKGPLCK ddPTM_A459_MK2206_30min_R2 1 LSDDFDSPVKGPLCK 15 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 LS(0.215)DDFDS(0.785)PVKGPLCK 61.962 0.042796 2214200 7782.3 12243 10467 12772 11039 9466.2 10372 8958.9 9489.8 14163 TRUE FALSE 8378.118872 11635.03042 10815.96456 11728.48674 10605.55339 9826.442874 9010.143941 10129.85899 10315.20565 13700.86247 0.611503027 0.849218832 0.789436766 0.856040032 0.774079254 0.717213453 0.65763334 0.73935922 0.752887322 1 13.74197909 -10.82744237 5.644592792 1.000029245 0.753679254 0.518269169 0.072301205 2.75E-05 3.39E-06 0.072328033 0.017540045 1.49E-11 10.82744237 -0.246349991 LSDEEMATILS(ph)FNR ddPTM_A459_MK2206_30min_R1 2 LSDEEMATILSFNR 14 0 O60218;C9JRZ8;C9JRZ8-2 O60218 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 1 LSDEEMATILS(1)FNR;LSDEEMATILS(1)FNR 175.01 7.53E-05 7255600 2408 2648.6 2334.9 2022.04 2453.9 2389.6 2201 2068.08 1796.83 1877.68 TRUE FALSE 2203.186955 2476.175659 2176.413493 2177.777871 2356.155967 2524.897087 2054.175306 2049.998995 1983.616909 2110.301174 1.044015415 1.173375483 1.031328381 1.031974913 1.11650223 1.196462911 0.973403859 0.971424847 0.939968632 1 11.04323319 -7.369459107 9.452690064 0.968066497 1.096944507 0.571885243 0.054116308 0.292453528 23.68884091 0.023335327 0.015708547 4.27E-08 7.369459107 0.128878009 LSDEEMATILSFNR ddPTM_A459_MK2206_30min_R1 2 LSDEEMATILSFNR 14 0 O60218;C9JRZ8;C9JRZ8-2 O60218 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ; 174.23 0.0012432 88662000 3367.5 4393.4 3799.3 3789.1 4244.6 3367.52 4000.9 3526.9 2578.17 3235.4 FALSE TRUE 3081.076442 4107.388861 3541.414101 4080.937139 4075.528594 3558.186072 3734.007261 3496.064685 2846.179998 3636.225778 0.847328145 1.12957476 0.9739258 1.122300261 1.120812855 0.978538267 1.026890927 0.961454238 0.782729173 1 11.82822607 -7.947922891 3.821954525 0.885058379 1.035146735 0.246727668 0.095030997 0.266628466 7.956678919 0.057769145 0.024243792 1.13E-08 7.947922891 0.150088357 LSDEEMATILSFNR ddPTM_A459_MK2206_30min_R2 2 LSDEEMATILSFNR 14 0 O60218;C9JRZ8;C9JRZ8-2 O60218 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ; 229 4.37E-12 21959000 35364 41447 41265 48015 36817 37426 42951 34894 35919 39199 FALSE TRUE 38071.49503 39388.80225 42640.7545 44092.02091 35371.37959 38850.27266 37311.48211 39454.76561 39043.16969 37919.93984 1.003996715 1.038735884 1.124494255 1.162766109 0.932791026 1.024534132 0.983954148 1.040475427 1.029621087 1 15.21066905 -6.265468628 24.99971529 1.004154562 1.082372072 0.391513798 0.049178702 411.3603852 2552300.963 0.016024874 0.018885109 5.43E-07 6.265468628 0.078217511 LSDPLLPS(ph)PEDETGSLVHLEDPER ddPTM_A459_MK2206_30min_R1 2 LSDPLLPSPEDETGSLVHLEDPER 24 0 Q8WYL5-4;Q8WYL5;Q8WYL5-2;Q8WYL5-5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 LSDPLLPS(0.977)PEDET(0.021)GS(0.002)LVHLEDPER;LS(0.013)DPLLPS(0.987)PEDET(0.001)GSLVHLEDPER 117.57 9.96E-08 6019900 1834.39 1664.98 1404.7 1222.57 1619.95 2096.2 1949.69 1617.12 1485.52 1724.31 TRUE FALSE 1678.365498 1556.589499 1309.352878 1316.732553 1555.423961 2214.885032 1819.629738 1602.98169 1639.94512 1937.930541 0.866060709 0.803222544 0.675644896 0.679452914 0.80262111 1.142912497 0.938955086 0.827161581 0.846235242 1 10.92030115 -6.540674291 24.98787166 0.943191345 0.752130257 0.485595346 0.096291057 228.2442049 320490.235 0.034166015 0.034172017 2.88E-07 6.540674291 -0.191061089 LSDPLLPS(ph)PEDETGSLVHLEDPER ddPTM_A459_MK2206_30min_R2 1 LSDPLLPSPEDETGSLVHLEDPER 24 0 Q8WYL5-4;Q8WYL5;Q8WYL5-2;Q8WYL5-5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 LSDPLLPS(0.999)PEDET(0.001)GSLVHLEDPER 91.1 0.00089073 0 6120.7 5439.2 5192.8 6454.2 5760.9 6596.3 8207.7 5985.7 7967.5 6289.9 TRUE FALSE 6589.305498 5169.097237 5365.92536 5926.871214 5534.69812 6847.326819 7130.019131 6768.051542 8660.498748 6084.661078 1.082937145 0.849529197 0.881877444 0.9740676 0.909614858 1.125342354 1.171802182 1.112313645 1.423332974 1 12.57096119 -6.862709767 3.718359355 1.182635306 0.932685045 0.49690564 0.114631259 0.185874436 4.912588411 0.040518987 0.035787725 1.37E-07 6.862709767 -0.249950261 LSDPPTSPSS(ph)PSQMMPHVQTHF ddPTM_A459_MK2206_30min_R1 1 LSDPPTSPSSPSQMMPHVQTHF 22 0 Q13496;Q13496-2 Q13496 MTM1 Myotubularin 1 LS(0.001)DPPT(0.003)S(0.012)PS(0.204)S(0.779)PS(0.002)QMMPHVQTHF 81.974 0.00064513 6919100 1804.9 1668.9 2020.6 1467.3 1679 2121.4 2040.3 1865.4 1330.9 1187.1 TRUE FALSE 1651.383777 1560.254307 1883.447302 1580.3117 1612.121875 2241.511835 1904.19531 1849.091004 1469.251818 1334.16691 1.237764004 1.169459604 1.411702904 1.184493251 1.208335975 1.680083517 1.427254188 1.38595178 1.101250381 1 10.38172345 -8.402948614 3.86021042 1.004871378 1.339500948 0.39056619 0.145825116 0.242950561 5.964504574 0.150373686 0.039692406 3.95E-09 8.402948614 0.33462957 LSDPPTSPSS(ph)PSQMMPHVQTHF ddPTM_A459_MK2206_30min_R2 2 LSDPPTSPSSPSQMMPHVQTHF 22 0 Q13496;Q13496-2 Q13496 MTM1 Myotubularin 1 LSDPPTSPS(0.007)S(0.992)PS(0.001)QMMPHVQTHF;LSDPPTSPS(0.015)S(0.984)PS(0.001)QMMPHVQTHF 134.69 1.22E-05 14996200 50045 76004 56674 83920 76044 79134 72486 57707 74351 57443 TRUE FALSE 53876.48368 72229.75188 58563.48287 77063.46755 73058.13047 82145.49982 62968.50113 65249.50304 80817.91558 55568.63961 0.969548365 1.299829407 1.053894486 1.386815803 1.314736711 1.478270845 1.133166145 1.174214512 1.454379955 1 15.7619833 -4.757094797 24.9549368 1.263344449 0.96954792 0.232554223 0.154924354 184.23265 1058079.338 0.037233776 0.283341585 1.75E-05 4.757094797 -0.293796529 LSDS(ph)PSMKK ddPTM_A459_MK2206_30min_R1 1 LSDSPSMKK 9 1 F6VRR5;Q9BY77-2;Q9BY77 F6VRR5 POLDIP3 Polymerase delta-interacting protein 3 1 LS(0.001)DS(0.982)PS(0.017)MKK 128.01 0.0079468 11617000 3704.8 3353.8 3511.8 3091.5 3284 2534.4 2974.9 3098.5 2385.8 2192 TRUE FALSE 3389.687305 3135.46701 3273.4288 3329.607866 3153.191326 2677.895538 2776.449849 3071.410141 2633.812448 2463.561509 1.375929642 1.272737457 1.328738409 1.351542413 1.279932047 1.087001696 1.127006506 1.246735724 1.069107647 1 11.26652978 -6.653897234 4.59051419 1.123047912 1.326306102 0.739466125 0.064090148 0.119252656 4.279482596 0.021250587 0.02108653 2.22E-07 6.653897234 0.203258191 LSDSPS(ph)MKK ddPTM_A459_MK2206_30min_R1 1 LSDSPSMKK 9 1 F6VRR5;Q9BY77-2;Q9BY77 F6VRR5 POLDIP3 Polymerase delta-interacting protein 3 1 LS(0.001)DS(0.186)PS(0.812)MKK 119.34 0.012443 10213000 2913.1 3033.6 2912.6 2717.4 2444.8 2303.1 2763.2 2697.2 2287 1556.6 TRUE FALSE 2665.325548 2836.112089 2714.900827 2926.694619 2347.418439 2433.499532 2578.87197 2673.618665 2524.741834 1749.44336 1.523527774 1.621151135 1.551865519 1.672929051 1.341808768 1.391013615 1.474110011 1.528268206 1.443168663 1 10.77268024 -12.66558796 0.215196833 3.19E-11 1.589576917 0.761633011 0.08719802 31.35288547 0.638690241 14.41200545 0.200437835 2.16E-13 12.66558796 1.589576917 LSDVDANTAIKHEEQS(ph)NEDIPIAEQSSK ddPTM_A459_MK2206_30min_R1 1 LSDVDANTAIKHEEQSNEDIPIAEQSSK 28 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 LSDVDANTAIKHEEQS(1)NEDIPIAEQSSK 107.98 3.87E-10 6064200 3710.2 4064 3708.7 3675.4 3751.4 2325.3 3081.9 3748.7 3198.9 2115.1 TRUE FALSE 3394.628007 3799.432861 3456.963777 3958.479945 3601.973794 2456.956477 2876.312074 3715.925511 3531.437102 2377.134556 1.428033595 1.598324694 1.454256667 1.665231753 1.51525869 1.03357905 1.209991276 1.563195277 1.485585699 1 11.21500785 -6.560139483 24.93545285 1.288837442 1.541913395 0.372814682 0.175449336 202.7231606 135664.1326 0.060111753 0.060111901 2.75E-07 6.560139483 0.253075952 LSEAVWQPEEHYSS(ph)SPEK ddPTM_A459_MK2206_30min_R1 1 LSEAVWQPEEHYSSSPEK 18 0 F5H269;Q9Y485 F5H269 DMXL1 DmX-like protein 1 1 LSEAVWQPEEHYS(0.001)S(0.499)S(0.499)PEK 171.59 4.20E-08 14692000 5831 3361.9 4445.1 3128.6 7631.9 7249.8 7041.9 5959.7 3525.7 3232.6 TRUE FALSE 5335.04283 3143.039699 4143.378997 3369.565314 7327.905262 7660.277411 6572.1477 5907.594971 3892.209132 3633.078893 1.468463248 0.865117382 1.140459406 0.927468248 2.016995908 2.108480888 1.808974672 1.626057442 1.071325244 1 11.82697698 -6.249974708 24.94047127 1.671950779 1.086435814 0.299670585 0.369578344 817.3584362 1778096.778 0.111386674 0.142529822 5.62E-07 6.249974708 -0.585514965 LSEAVWQPEEHYSSS(ph)PEK ddPTM_A459_MK2206_30min_R1 1 LSEAVWQPEEHYSSSPEK 18 0 F5H269;Q9Y485 F5H269 DMXL1 DmX-like protein 1 1 LSEAVWQPEEHYS(0.001)S(0.098)S(0.901)PEK 144.95 0.00018559 13898000 6520.3 3104.8 4249.6 3197.9 7573.5 7155.9 7567.4 6588 3393 3298.4 TRUE FALSE 5965.714246 2902.676956 3961.148992 3444.202812 7271.831458 7561.060874 7062.592554 6530.401811 3745.714492 3707.030694 1.609297235 0.783019402 1.068550363 0.92910016 1.961632384 2.039654241 1.905188583 1.761626043 1.010435252 1 11.85604835 -6.253923372 24.96885832 1.687103921 1.072962213 0.276748239 0.396888189 653.002951 2169334.059 0.11778581 0.149079921 5.57E-07 6.253923372 -0.614141708 LSEAVWQPEEHYSSS(ph)PEK ddPTM_A459_MK2206_30min_R2 1 LSEAVWQPEEHYSSSPEK 18 0 F5H269;Q9Y485 F5H269 DMXL1 DmX-like protein 1 1 LSEAVWQPEEHYS(0.002)S(0.239)S(0.759)PEK 171.59 4.20E-08 9714400 18208 44419 30247 54788 54175 53150 56337 38698 50347 35032 TRUE FALSE 19602.01848 42213.21705 31255.41988 50311.64514 52047.81729 55172.66049 48939.88423 43755.96147 54726.09105 33888.90871 0.578419879 1.245635184 0.922290539 1.484605054 1.535836333 1.628044767 1.444126887 1.291158764 1.614867316 1 15.04852556 -4.58626529 0.866101037 1.446150984 5.30E-15 0.537121428 0.222246878 2.318815934 1.077722603 0.076640543 3.458344664 2.59E-05 4.58626529 -1.446150984 LSEEAECPNPS(ph)TPSK ddPTM_A459_MK2206_30min_R1 1 LSEEAECPNPSTPSK 15 0 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 LSEEAECPNPS(0.499)T(0.499)PS(0.002)K 181.75 2.05E-05 14599000 11281 11516 10225 8256.5 8470 6766.6 6774 6146.2 5904.3 4909.6 TRUE FALSE 10321.49171 10766.30631 9530.955488 8892.417061 8132.621964 7149.719044 6322.11882 6092.464421 6518.073114 5517.838314 1.870567988 1.951181911 1.727298798 1.611576229 1.473878266 1.295746384 1.145760071 1.104139715 1.181272945 1 12.42988747 -6.294996699 0.646152494 1.056432606 1.988421118 0.97520584 0.050789651 0.119667607 0.10667385 0.033817885 0.061713191 5.07E-07 6.294996699 0.931988512 LSEEAECPNPS(ph)TPSK ddPTM_A459_MK2206_30min_R2 3 LSEEAECPNPSTPSK 15 0 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 LSEEAECPNPS(0.5)T(0.5)PSK;LSEEAECPNPS(0.805)T(0.195)PSK;LSEEAECPNPS(0.5)T(0.5)PS(0.001)K 209.6 1.36E-06 87669800 405997 409233 410694 353800 353698 289092 318252 248954 218419 267150 TRUE FALSE 437080.4425 388911.0843 424386.333 324893.4082 339810.0393 300093.5986 276465.1301 281493.1426 237416.6898 258432.9174 1.691272331 1.50488215 1.642152777 1.257167282 1.314886829 1.161205011 1.069775216 1.089230991 0.918678209 1 17.97943032 -6.129821765 0.544815802 0.967702448 1.744372956 0.906083965 0.078371031 0.332426316 0.188479429 0.055985993 0.138649031 7.42E-07 6.129821765 0.776670508 LSEEAECPNPST(ph)PSK ddPTM_A459_MK2206_30min_R1 3 LSEEAECPNPSTPSK 15 0 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 LSEEAECPNPS(0.005)T(0.995)PSK;LSEEAECPNPS(0.22)T(0.78)PSK;LSEEAECPNPS(0.082)T(0.917)PS(0.001)K 289.61 8.59E-67 109336000 24911.4 25397.6 22576.3 19728.9 18000.7 14563.1 14282.8 13983.5 12766 10895 TRUE FALSE 22792.55462 23744.21162 21043.88366 21248.4233 17283.694 15387.65014 13330.02047 13861.24373 14093.07138 12244.75485 1.861413715 1.939133279 1.718603917 1.735308183 1.411518173 1.256672781 1.088631061 1.132014801 1.150947614 1 13.57987627 -6.40696012 1.008797919 1.083191859 1.897365238 0.971026489 0.056973294 0.077367168 0.168214232 0.026744323 0.035351663 3.92E-07 6.40696012 0.814173379 LSEEAECPNPST(ph)PSK ddPTM_A459_MK2206_30min_R2 3 LSEEAECPNPSTPSK 15 0 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 LSEEAECPNPS(0.201)T(0.792)PS(0.007)K;LSEEAECPNPS(0.078)T(0.922)PSK;LSEEAECPNPS(0.172)T(0.656)PS(0.172)K 239.51 1.11E-19 100597000 285663 295743 288209 265567 239557 183554 226166 163842 173644 201886 TRUE FALSE 307533.5789 281056.8327 297817.7442 243869.3266 230150.7885 190539.2761 196470.1325 185256.712 188747.2412 195298.4764 1.574684988 1.439114313 1.524936342 1.24870061 1.178456652 0.975631145 1.00599931 0.948582474 0.966455268 1 17.57532117 -6.160307276 1.127703116 0.966984931 1.536584585 0.955410812 0.04951396 0.085895023 0.225006377 0.01892408 0.031471842 6.91E-07 6.160307276 0.569599654 LSEGPAAMAGPGS(ph)PPR ddPTM_A459_MK2206_30min_R1 2 LSEGPAAMAGPGSPPR 16 0 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 LSEGPAAMAGPGS(1)PPR;LSEGPAAMAGPGS(1)PPR 160.03 5.72E-05 20057700 2135.07 1627.57 2186.38 1442.37 2054.49 2510.7 2417.54 1936.84 2160.01 1662.04 TRUE FALSE 1953.471085 1521.614897 2037.974617 1553.461587 1972.655313 2652.853664 2256.270318 1919.906412 2384.550769 1867.946063 1.045785595 0.814592523 1.091024338 0.831641565 1.056055821 1.420198215 1.207888366 1.027816836 1.276562967 1 10.86723708 -6.526987552 24.9967853 1.194964375 0.946402878 0.410878902 0.135956416 111.1504008 676198.5555 0.043140881 0.043317059 2.97E-07 6.526987552 -0.248561496 LSEGPAAMAGPGS(ph)PPR ddPTM_A459_MK2206_30min_R2 1 LSEGPAAMAGPGSPPR 16 0 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 LSEGPAAMAGPGS(1)PPR 90.853 0.01204 19674000 28602 29719 25614 30638 34488 27518 41094 25981 22666 32245 TRUE FALSE 30791.79111 28243.19768 26467.95798 28134.77739 33133.82783 28565.21677 35698.30844 29376.80591 24637.44771 31192.84829 0.987142656 0.905438241 0.848526487 0.901962435 1.062225146 0.915761732 1.144438882 0.941780168 0.789842834 1 14.92892767 -6.131869459 20.96986976 0.978571127 0.90592523 0.104072456 0.092625103 10.50212902 1686.026948 0.027884942 0.035999399 7.38E-07 6.131869459 -0.072645897 LSEGPAAMAGPGS(ph)PPRR ddPTM_A459_MK2206_30min_R1 2 LSEGPAAMAGPGSPPRR 17 1 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 LSEGPAAMAGPGS(1)PPRR;LSEGPAAMAGPGS(1)PPRR 94.176 0.0035581 15106200 4684.6 5321.5 5856.6 4711.7 3909.5 3648.4 4843.1 4354.7 4932.6 5547.8 TRUE FALSE 4286.15017 4975.069383 5459.070309 5074.59595 3753.776336 3854.969255 4520.025636 4316.627317 5445.361421 6235.103348 0.687422474 0.797912898 0.875538063 0.813875195 0.602039153 0.618268702 0.724931951 0.692310468 0.873339401 1 12.60619776 -8.497665604 3.37904557 0.999059245 0.729428963 0.544494373 0.080854272 0.182498931 4.984584598 0.088272857 0.023370747 3.18E-09 8.497665604 -0.269630283 LSEGPAAMAGPGS(ph)PPRR ddPTM_A459_MK2206_30min_R2 2 LSEGPAAMAGPGSPPRR 17 1 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 LSEGPAAMAGPGS(1)PPRR;LSEGPAAMAGPGS(1)PPRR 91.64 0.0042727 23686000 32839 32025 30283 38977 42838 32742 43486 30602 28161 44465 TRUE FALSE 35353.17909 30434.68507 31292.62011 35792.45442 41155.96488 33988.01975 37776.23596 34601.78647 30610.39288 43014.11069 0.821897245 0.707551187 0.727496619 0.832109599 0.956801482 0.790159769 0.87822892 0.804428731 0.711636074 1 15.39252239 -11.84232635 2.381664171 2.121442783 0.805520743 0.392100104 0.073406255 15333967.81 804435.9481 93949371.23 0.019993691 1.44E-12 11.84232635 -1.31592204 LSEGS(ph)QPAEEEEDQETPSR ddPTM_A459_MK2206_30min_R1 1 LSEGSQPAEEEEDQETPSR 19 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 LSEGS(1)QPAEEEEDQETPSR 224.99 5.40E-20 7348700 1262.6 1304.5 1332 1045 1672.3 1451.9 1345.6 1558.5 1437.5 1139 TRUE FALSE 1155.20924 1219.576813 1241.587551 1125.486081 1605.68875 1534.105323 1255.837479 1544.874199 1586.933269 1280.107919 0.902431133 0.95271406 0.9699085 0.879211873 1.25433858 1.198418743 0.981040317 1.206831218 1.239687096 1 10.32204973 -6.253217107 24.95588037 1.151361908 0.931101368 0.589810946 0.090057881 440.8742909 1338121.228 0.026918595 0.034167276 5.58E-07 6.253217107 -0.22026054 LSEGS(ph)QPAEEEEDQETPSR ddPTM_A459_MK2206_30min_R2 2 LSEGSQPAEEEEDQETPSR 19 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 LSEGS(1)QPAEEEEDQETPSR;LS(0.024)EGS(0.976)QPAEEEEDQETPSR 305.85 5.50E-101 29526000 46882 65270 66404 70111 59348 56270 68379 60676 59605 58168 TRUE FALSE 50471.32197 62028.78671 68617.87622 64382.70703 57017.69932 58411.39428 59400.75516 68606.56153 64789.33516 56269.98292 0.896949303 1.102342377 1.219440146 1.144174988 1.013288015 1.038056016 1.055638407 1.219239068 1.151401365 1 15.78007791 -7.697469311 24.99999354 1.138998065 1.074114113 0.059169602 0.094586873 159.8645689 62475.13203 0.046174701 0.02665896 2.01E-08 7.697469311 -0.064883952 LSEGSQPAEEEEDQET(ph)PSR ddPTM_A459_MK2206_30min_R2 1 LSEGSQPAEEEEDQETPSR 19 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 LSEGSQPAEEEEDQET(0.999)PS(0.001)R 278.27 3.79E-71 6966800 27823 28900 27005 34412 32577 32356 33826 25980 27935 27455 TRUE FALSE 29953.15027 27464.86802 27905.33322 31600.42952 31297.86329 33587.33025 29384.60557 29375.6752 30364.73581 26559.1456 1.127790431 1.034102092 1.050686405 1.189813483 1.178421315 1.264623899 1.106383692 1.106047448 1.143287373 1 14.69692112 -4.381457306 20.30473001 1.125822573 2.595298714 0 0.07555834 25020.6133 4946455.876 0.019202894 647078.4376 4.15E-05 4.381457306 1.469476141 LSEGSQPAEEEEDQETPS(ph)R ddPTM_A459_MK2206_30min_R2 1 LSEGSQPAEEEEDQETPSR 19 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 LSEGSQPAEEEEDQET(0.172)PS(0.828)R 173.03 1.74E-09 6978900 16946 18710 17647 24782 17099 17479 18130 14366 16472 19832 TRUE FALSE 18243.39879 17780.88861 18235.34217 22757.23133 16427.60734 18144.17559 15749.50922 16243.68553 17904.70479 19184.88346 0.950925703 0.92681765 0.950505757 1.186206388 0.856278714 0.945753756 0.820933275 0.846691905 0.93327149 1 14.22768238 LSEPGTDLVEPS(ph)PK ddPTM_A459_MK2206_30min_R2 2 LSEPGTDLVEPSPK 14 0 Q8NEN9 Q8NEN9 PDZD8 PDZ domain-containing protein 8 1 LS(0.001)EPGTDLVEPS(0.999)PK;LSEPGT(0.065)DLVEPS(0.935)PK 95.428 0.012505 5880800 104598 43729 55002 47116 46554 52509 70451 34994 42306 66209 TRUE FALSE 112606.1033 41557.48145 56835.73923 43266.47208 44726.05604 54507.26679 61200.69907 39567.83595 45985.69941 64048.60575 1.758135122 0.648842874 0.887384488 0.675525588 0.698314281 0.851029716 0.955535228 0.617778256 0.717981272 1 15.96687955 -4.756901958 24.99972843 0.776335679 1.75813659 0.841339513 0.126925007 49.30230494 271606.3744 0.030642021 0.238277036 1.75E-05 4.756901958 0.981800911 LSEPSLPIEDSQDLY(ph)NASPEPK ddPTM_A459_MK2206_30min_R1 1 LSEPSLPIEDSQDLYNASPEPK 22 0 E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4 E7ESG2 CLSPN Claspin 1 LSEPSLPIEDSQDLY(0.974)NAS(0.026)PEPK 97.621 0.0011758 4752500 2568.2 2527.6 2924 2667.8 2269.6 2044 2334.9 2808.2 2485.7 2485.4 TRUE FALSE 2349.761104 2363.052781 2725.527027 2873.274418 2179.197026 2159.729514 2179.143081 2783.648203 2744.09741 2793.310116 0.841210251 0.845968647 0.975733776 1.028627077 0.780148618 0.773179283 0.780129306 0.996541053 0.98238194 1 11.44776004 -7.787148817 24.89203605 0.99209627 0.864563396 0.367839745 0.079340727 287.5574344 278410.5515 0.049142769 0.023620952 1.63E-08 7.787148817 -0.127532874 LSES(ph)QLSFR ddPTM_A459_MK2206_30min_R1 2 LSESQLSFR 9 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 LS(0.003)ES(0.996)QLS(0.001)FR;LS(0.003)ES(0.958)QLS(0.039)FR 122.55 0.0059098 16086600 2728.7 3220.6 2938.9 3051.6 3020.6 2801.2 3115.9 2794 3017.4 3192.6 TRUE FALSE 2496.609736 3010.938355 2739.415656 3286.634761 2900.283106 2959.801523 2908.043996 2769.572353 3331.069528 3588.123391 0.695798183 0.839140137 0.763467517 0.915975958 0.808300827 0.824888445 0.810463766 0.771872104 0.928359804 1 11.80901379 -14.52287875 0.150914295 1.6673328 0.761303778 0.519919279 0.05895772 114.0231512 1.015318425 22.68098478 0.288724011 3.00E-15 14.52287875 -0.906029022 LSES(ph)QLSFR ddPTM_A459_MK2206_30min_R2 1 LSESQLSFR 9 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 LS(0.012)ES(0.988)QLSFR 99.343 0.018892 3489500 8531.9 9192.1 7574.7 8389.7 7891.5 7882.6 8484.8 9110.6 12432 8995.3 TRUE FALSE 9185.108824 8735.633681 7827.236717 7704.234673 7581.640058 8182.577867 7370.735568 10301.3867 13513.31289 8701.784098 1.055543176 1.003889959 0.899497922 0.885362655 0.871274209 0.940333359 0.847037284 1.183824672 1.552935896 1 13.08709551 -7.910548758 4.990730167 1.30472946 0.928588799 0.528297504 0.137987283 0.136354734 5.672052781 0.075121437 0.034592612 1.23E-08 7.910548758 -0.376140661 LSES(ph)SASPQPK ddPTM_A459_MK2206_30min_R2 1 LSESSASPQPK 11 0 Q8N5Y2;Q8N5Y2-3;Q8N5Y2-2;A0A3B3IT59;Q8N5Y2-6;Q8N5Y2-4;A0A3B3ITL5;A0A3B3ITF3;A0A3F2YNX2;A0A3B3IRN2;A0A3B3IU80;A0A3B3IUB0;A0A3B3IS72;A0A3B3ISB4;A0A3B3IRI6;A0A3B3ITV8;A0A3B3IRT2;A0A3B3ITF8;A0A3B3IT49;Q8N5Y2-5;A0A3B3ITX5 Q8N5Y2 MSL3 Male-specific lethal 3 homolog 1 LS(0.004)ES(0.784)S(0.122)AS(0.09)PQPK 83.045 0.038835 36527000 82480 90834 86920 77845 78096 63273 96924 60228 68571 86763 TRUE FALSE 88794.73222 86323.31564 89817.86942 71484.81449 75029.55864 65680.89835 84197.76237 68100.00639 74535.18163 83931.93042 1.057937447 1.02849196 1.07012753 0.851699873 0.893933432 0.782549597 1.003167233 0.811371859 0.888043219 1 16.35693214 -5.75922781 24.99995757 0.882638232 1.049816309 0.546465755 0.067412816 39.95115232 451601.9315 0.017454333 0.028449803 1.74E-06 5.75922781 0.167178077 LSESQLS(ph)FR ddPTM_A459_MK2206_30min_R2 1 LSESQLSFR 9 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 LS(0.001)ES(0.331)QLS(0.668)FR 97.452 0.020579 3141200 8237.8 10569 8259 9944.9 9949.6 10769 12018 8522 6875.6 10002 TRUE FALSE 8868.492302 10044.15883 8534.350938 9132.369858 9558.928711 11178.82184 10440.02216 9635.85466 7473.62726 9675.635559 0.91657982 1.038087758 0.882045514 0.943852195 0.987938069 1.155357886 1.079001178 0.995888549 0.772417193 1 13.24014071 -4.727864021 22.80791707 0.987745246 0.916578364 0.038361874 0.099316539 6299.896358 4278814.823 0.026046672 3.534706921 1.87E-05 4.727864021 -0.071166882 LSESS(ph)ASPQPK ddPTM_A459_MK2206_30min_R2 1 LSESSASPQPK 11 0 Q8N5Y2;Q8N5Y2-3;Q8N5Y2-2;A0A3B3IT59;Q8N5Y2-6;Q8N5Y2-4;A0A3B3ITL5;A0A3B3ITF3;A0A3F2YNX2;A0A3B3IRN2;A0A3B3IU80;A0A3B3IUB0;A0A3B3IS72;A0A3B3ISB4;A0A3B3IRI6;A0A3B3ITV8;A0A3B3IRT2;A0A3B3ITF8;A0A3B3IT49;Q8N5Y2-5;A0A3B3ITX5 Q8N5Y2 MSL3 Male-specific lethal 3 homolog 1 LS(0.021)ES(0.128)S(0.824)AS(0.028)PQPK 88.338 0.030787 32923000 64223 63951 65455 66919 71168 52442 70975 51866 50845 63487 TRUE FALSE 69139.96226 60775.28633 67637.23703 61451.50364 68373.58673 54437.71706 61655.89724 58645.06428 55267.40619 61415.42439 1.12577521 0.989576917 1.101307004 1.000587462 1.113296658 0.886385099 1.003915512 0.95489146 0.899894558 1 15.90631341 -6.758249863 24.99999997 0.949629179 1.060172285 0.537522442 0.05416397 66.30154587 519683.7921 0.017031127 0.016351414 1.74E-07 6.758249863 0.110543106 LSESSAS(ph)PQPK ddPTM_A459_MK2206_30min_R1 4 LSESSASPQPK 11 0 Q8N5Y2;Q8N5Y2-3;Q8N5Y2-2;A0A3B3IT59;Q8N5Y2-6;Q8N5Y2-4;A0A3B3ITL5;A0A3B3ITF3;A0A3F2YNX2;A0A3B3IRN2;A0A3B3IU80;A0A3B3IUB0;A0A3B3IS72;A0A3B3ISB4;A0A3B3IRI6;A0A3B3ITV8;A0A3B3IRT2;A0A3B3ITF8;A0A3B3IT49;Q8N5Y2-5;A0A3B3ITX5 Q8N5Y2 MSL3 Male-specific lethal 3 homolog 1 LSES(0.007)S(0.007)AS(0.987)PQPK;LSESS(0.002)AS(0.998)PQPK;LSES(0.002)S(0.01)AS(0.988)PQPK;LSES(0.002)S(0.01)AS(0.988)PQPK 207.34 1.78E-05 65617000 23637.1 22964 23007.3 19745.9 20143.4 17803.7 20894.9 19833.4 18901.4 17862.4 TRUE FALSE 21626.64052 21469.03943 21445.62858 21266.73264 19341.04572 18811.73011 19501.03935 19659.99867 20866.26817 20075.32897 1.077274527 1.069424041 1.068257891 1.059346658 0.963423601 0.937057128 0.971393265 0.979311408 1.039398567 1 14.29313601 -6.210202717 5.711272014 0.977984039 1.069548935 0.740545005 0.025135965 0.111667511 8.542423532 0.007998587 0.010286805 6.16E-07 6.210202717 0.091564895 LSESSAS(ph)PQPK ddPTM_A459_MK2206_30min_R2 1 LSESSASPQPK 11 0 Q8N5Y2;Q8N5Y2-3;Q8N5Y2-2;A0A3B3IT59;Q8N5Y2-6;Q8N5Y2-4;A0A3B3ITL5;A0A3B3ITF3;A0A3F2YNX2;A0A3B3IRN2;A0A3B3IU80;A0A3B3IUB0;A0A3B3IS72;A0A3B3ISB4;A0A3B3IRI6;A0A3B3ITV8;A0A3B3IRT2;A0A3B3ITF8;A0A3B3IT49;Q8N5Y2-5;A0A3B3ITX5 Q8N5Y2 MSL3 Male-specific lethal 3 homolog 1 LSES(0.009)S(0.298)AS(0.693)PQPK 120.87 0.0046048 6902900 37578 44229 42216 42803 37310 27561 41743 28646 25250 41737 TRUE FALSE 40455.00057 42032.65217 43623.46037 39305.85798 35845.02193 28609.85317 36262.09396 32390.13056 27446.19936 40375.12511 1.001978334 1.041053175 1.080453875 0.973516686 0.88779965 0.708600979 0.898129575 0.80222985 0.679779921 1 15.30117911 -6.272509975 2.477775634 0.810142536 1.038632282 0.553876412 0.087741241 0.204086524 2.473698213 0.027846891 0.035064147 5.34E-07 6.272509975 0.228489746 LSFASETPLEKEPHS(ph)PADQPEQQAESTLTSAETR ddPTM_A459_MK2206_30min_R2 1 LSFASETPLEKEPHSPADQPEQQAESTLTSAETR 34 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2 H3BSS6 ZNF106 Zinc finger protein 106 1 LS(0.031)FAS(0.029)ET(0.029)PLEKEPHS(0.91)PADQPEQQAESTLTSAETR 47.723 0.0061681 2564700 2267.1 4635 4312.2 5829.5 5855.3 3941 4736.5 4107.5 4401.3 4084.6 TRUE FALSE 2440.670919 4404.83264 4455.966596 5353.211202 5625.391501 4090.977517 4114.59186 4644.364353 4784.117118 3951.319837 0.617684981 1.114775018 1.127715999 1.354790658 1.423674047 1.035344565 1.041320883 1.175395702 1.210764331 1 11.94811891 -4.726691376 3.035260006 1.181836668 0.480005055 0.619091451 0.129142862 0.339289574 3.992929411 0.035253452 0.621001896 1.88E-05 4.726691376 -0.701831613 LSFLS(ph)WGTNK ddPTM_A459_MK2206_30min_R1 2 LSFLSWGTNK 10 0 Q8IUC4-2;Q8IUC4;A8MT19 Q8IUC4-2 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 LS(0.001)FLS(0.991)WGT(0.009)NK;LS(0.018)FLS(0.98)WGT(0.002)NK 184.44 0.00017713 109098000 4297.5 5170.1 4536.33 3715.95 4589.7 4029.88 4910.5 3946.83 4762.17 4257 TRUE FALSE 3931.975058 4833.52555 4228.416559 4002.153113 4406.88253 4258.048323 4582.929505 3912.323281 5257.214613 4784.389299 0.821834264 1.01027012 0.883794419 0.836502396 0.921096143 0.889987845 0.957892266 0.817726785 1.098826681 1 12.22411907 -8.268408741 24.96918549 1.04941335 0.89722853 0.509252541 0.061511714 463.2440954 1659644.342 0.051697667 0.014490049 5.39E-09 8.268408741 -0.15218482 LSGEHS(ph)ESSTPRPR ddPTM_A459_MK2206_30min_R1 2 LSGEHSESSTPRPR 14 1 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-3;Q7Z3K3-6;Q7Z3K3 Q7Z3K3-5 POGZ Pogo transposable element with ZNF domain 1 LSGEHS(1)ESSTPRPR;LSGEHS(0.996)ES(0.004)STPRPR 91.592 0.0092289 47000000 2445.13 1783.89 2370.72 1729.48 3575.2 2798.2 2817.2 2617.6 1604.87 1644.99 TRUE FALSE 2237.158854 1667.758437 2209.802132 1862.684849 3432.792213 2956.631666 2629.269728 2594.714599 1771.70198 1848.78378 1.210070576 0.902084091 1.195273431 1.007519034 1.856784038 1.599230639 1.422161832 1.403471096 0.958306752 1 10.85236079 LSGEHSESS(ph)TPRPR ddPTM_A459_MK2206_30min_R2 2 LSGEHSESSTPRPR 14 1 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-3;Q7Z3K3-6;Q7Z3K3 Q7Z3K3-5 POGZ Pogo transposable element with ZNF domain 1 LSGEHSES(0.003)S(0.499)T(0.499)PRPR;LSGEHSES(0.008)S(0.496)T(0.496)PRPR 73.082 0.021408 8242700 48250 79126 65238 87327 73716 92761 78059 61016 82670 78908 TRUE FALSE 51944.0571 75196.7179 67413.00236 80192.10475 70821.53945 96291.08486 67809.75953 68991.0007 89860.48717 76333.23842 0.680490677 0.985111066 0.883140867 1.050552897 0.927794247 1.261456829 0.888338566 0.90381336 1.177213086 1 16.22002378 -4.209188276 1.119890638 1.019617703 1.63E-19 0.404953543 0.119343384 5.381725927 2.296114313 0.035640502 8.832869245 6.18E-05 4.209188276 -1.019617703 LSGEMPPAS(ph)PSFPR ddPTM_A459_MK2206_30min_R1 2 LSGEMPPASPSFPR 14 0 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 LSGEMPPAS(0.838)PS(0.162)FPR;LSGEMPPAS(0.831)PS(0.169)FPR 144.88 0.00052621 13730200 3178.2 3058.1 2766.7 2482.2 3118.6 2553.7 2678.2 2887.6 2503.3 2411.1 TRUE FALSE 2907.877401 2859.017134 2578.904112 2673.379474 2994.379558 2698.288287 2499.542165 2862.354018 2763.526993 2709.805271 1.073094599 1.055063685 0.951693518 0.986557781 1.105016508 0.995749885 0.922406562 1.056295096 1.019824938 1 11.40397347 LSGEMPPAS(ph)PSFPR ddPTM_A459_MK2206_30min_R2 2 LSGEMPPASPSFPR 14 0 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 LSGEMPPAS(0.972)PS(0.028)FPR;LSGEMPPAS(0.955)PS(0.045)FPR 135.91 0.00059943 10519200 31242 37533 33671 33384 34102 33012 37868 32089 27858 32043 TRUE FALSE 33633.91154 35669.1658 34793.57433 30656.42041 32762.98413 34268.29479 32895.88611 36283.14248 30281.03848 30997.43953 1.085054509 1.150713295 1.122466076 0.988998474 1.056957756 1.105520175 1.061245271 1.170520631 0.97688838 1 14.91986143 -14.52287875 0.111587708 0.728883244 1.129414173 0.196526102 0.057538167 303.922668 2.237663449 18.69284003 0.707045454 3.00E-15 14.52287875 0.400530929 LSGFS(ph)FK ddPTM_A459_MK2206_30min_R1 2 LSGFSFK 7 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 LSGFS(1)FK;LS(0.002)GFS(0.998)FK 116.05 0.012601 357840000 24039 22589 22099 17214.8 14983.2 13882.3 15791 14356.5 17868.7 22060 TRUE FALSE 21994.35682 21118.45199 20598.98145 18540.68688 14386.38742 14668.30383 14737.6112 14230.98263 19726.21531 24792.95934 0.887121078 0.851792305 0.830839964 0.747820646 0.580261001 0.591631827 0.594427273 0.5739929 0.795637787 1 14.59764286 -5.883455637 2.81511537 0.658469076 0.860763302 0.238202165 0.126224095 0.302306347 4.831563637 0.035893156 0.058200802 1.31E-06 5.883455637 0.202294226 LSGFS(ph)FK ddPTM_A459_MK2206_30min_R2 2 LSGFSFK 7 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 LSGFS(1)FK;LSGFS(1)FK 100.25 0.020692 387290000 216303 177058 151835 160783 120827 107152 155830 144950 103168 168025 TRUE FALSE 232863.324 168265.5572 156897.1031 147646.5146 116082.7249 111229.7444 135369.3338 163895.4627 112141.3662 162542.358 1.432631634 1.035210509 0.965269023 0.908357159 0.714169071 0.684312359 0.832824966 1.008324628 0.689920877 1 17.3104562 -4.000792534 0.91336876 0.822584785 3.243233929 0.720684307 0.112161948 4.010562989 0.935104937 0.038238772 13.58273792 9.98E-05 4.000792534 2.420649144 LSGFS(ph)FKK ddPTM_A459_MK2206_30min_R2 1 LSGFSFKK 8 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 LS(0.081)GFS(0.919)FKK 100.69 0.031678 273710000 710350 865480 705070 814830 630790 625080 859540 677800 681270 770020 TRUE FALSE 764734.9422 822501.5217 728576.6819 748255.7825 606022.0151 648867.8574 746681.3655 766390.7872 740525.6331 744894.3105 1.026635499 1.104185534 0.978094035 1.004512683 0.813567786 0.871087144 1.002399072 1.028858425 0.994135172 1 19.50667622 -5.48330354 2.661839839 0.952469082 1.06491478 0.271746732 0.066758277 0.380422413 5.296812575 0.020724005 0.048665236 3.29E-06 5.48330354 0.112445698 LSGINEIPRPFS(ph)PPVTSNTS(ph)PPPAAPLAR ddPTM_A459_MK2206_30min_R1 2 LSGINEIPRPFSPPVTSNTSPPPAAPLAR 29 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 2 LS(0.001)GINEIPRPFS(0.889)PPVT(0.243)S(0.243)NT(0.243)S(0.382)PPPAAPLAR;LSGINEIPRPFS(0.978)PPVT(0.061)S(0.058)NT(0.241)S(0.662)PPPAAPLAR 66.419 0.0011555 66802000 6306.6 6654.2 6829.1 6039.6 6750.6 6263.8 6683.6 6279.4 5511.8 4835.5 TRUE FALSE 5770.190553 6221.010371 6365.559719 6504.771038 6481.709307 6618.450943 6237.749239 6224.499868 6084.771334 5434.558246 1.061758894 1.144713165 1.171311343 1.196927283 1.19268375 1.217845249 1.147793244 1.145355259 1.119644147 1 12.40794705 -8.800769479 1.243611048 1.00025329 1.165695311 0.591412197 0.040073773 0.710022747 1.944811071 0.040897262 0.012414101 1.58E-09 8.800769479 0.165442021 LSGINEIPRPFS(ph)PPVTSNTS(ph)PPPAAPLAR ddPTM_A459_MK2206_30min_R2 1 LSGINEIPRPFSPPVTSNTSPPPAAPLAR 29 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 2 LSGINEIPRPFS(0.976)PPVT(0.144)S(0.209)NT(0.21)S(0.46)PPPAAPLAR 67.351 0.0010322 10337000 19242 27471 21852 32716 30823 27889 31545 27959 30904 31953 TRUE FALSE 20715.18231 26106.83009 22580.53477 30042.99815 29612.73415 28950.33544 27403.10361 31613.3373 33591.97406 30910.37623 0.670169207 0.844597617 0.730516336 0.971938935 0.958019208 0.936589552 0.886534134 1.022741912 1.086753969 1 14.91580359 -3.513184521 0.320332814 1.031826639 1.63E-14 0.720009172 0.065548902 9.062930312 0.396984658 0.066539577 4.250655888 0.000306772 3.513184521 -1.031826639 LSGINEIPRPFS(ph)PPVTSNTSPPPAAPLAR ddPTM_A459_MK2206_30min_R1 2 LSGINEIPRPFSPPVTSNTSPPPAAPLAR 29 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 LS(0.001)GINEIPRPFS(0.991)PPVT(0.004)S(0.002)NT(0.002)S(0.001)PPPAAPLAR;LSGINEIPRPFS(0.999)PPVT(0.001)SNTSPPPAAPLAR 112.26 2.47E-11 348070000 3358.6 2688.03 3501.8 3060.1 3549.9 3163.1 3569.5 3175.6 3098.2 2699.45 TRUE FALSE 3072.933433 2513.038758 3264.107573 3295.789432 3408.499966 3342.191989 3331.385168 3147.836064 3420.268977 3033.878246 1.012873024 0.828325514 1.075886146 1.086328839 1.123479484 1.101623637 1.098061589 1.037561764 1.127358681 1 11.56694747 -5.344834729 8.065670175 1.086089595 0.921084436 0.575588527 0.055092019 0.172470241 15.04565396 0.013277641 0.027779678 4.52E-06 5.344834729 -0.165005158 LSGINEIPRPFS(ph)PPVTSNTSPPPAAPLAR ddPTM_A459_MK2206_30min_R2 2 LSGINEIPRPFSPPVTSNTSPPPAAPLAR 29 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 LS(0.001)GINEIPRPFS(0.992)PPVT(0.005)S(0.001)NT(0.001)SPPPAAPLAR;LSGINEIPRPFS(0.97)PPVT(0.02)S(0.008)NT(0.002)SPPPAAPLAR 90.601 1.10E-06 212700000 72893 97128 98048 116360 101555 108996 110960 79829 99122 106058 TRUE FALSE 78473.74413 92304.76476 101316.8714 106853.0158 97567.44043 113143.9192 96390.81871 90262.92439 107743.4524 102597.3361 0.764871166 0.899679935 0.987519513 1.041479436 0.950974402 1.102795876 0.939506057 0.879778441 1.050158381 1 16.64663375 -4.863798472 2.097991901 0.9920793 0.724639301 0.58959913 0.059456817 0.408411561 2.357279766 0.016220206 0.19744598 1.37E-05 4.863798472 -0.267439999 LSGLAAPDYTRLS(ph)PAK ddPTM_A459_MK2206_30min_R1 2 LSGLAAPDYTRLSPAK 16 1 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L "Histone-lysine N-methyltransferase, H3 lysine-79 specific" 1 LSGLAAPDYT(0.002)RLS(0.998)PAK;LSGLAAPDYT(0.03)RLS(0.97)PAK 133.32 0.0024436 29647000 6016.7 6280.9 6474.1 5865.1 5761.3 4582.26 5600.9 5794.1 5793.8 4934.56 TRUE FALSE 5504.94807 5872.012268 6034.65613 6316.831018 5531.815221 4841.703601 5227.27418 5743.442795 6396.086243 5545.890547 0.992617511 1.058804212 1.088131127 1.139011123 0.997462026 0.873025452 0.942549107 1.035621375 1.153301925 1 12.43720343 -4.717533467 21.78749952 1.029359957 0.992615594 0.01991371 0.080994628 13095.55747 6496204.704 0.022429547 7.526737078 1.92E-05 4.717533467 -0.036744363 LSGLAAPDYTRLS(ph)PAK ddPTM_A459_MK2206_30min_R2 1 LSGLAAPDYTRLSPAK 16 1 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L "Histone-lysine N-methyltransferase, H3 lysine-79 specific" 1 LS(0.002)GLAAPDY(0.009)T(0.3)RLS(0.69)PAK 59.154 0.042715 16424000 51856 73843 66549 53673 67002 56859 74719 54940 54728 74018 TRUE FALSE 55826.13523 70176.064 68767.71045 49287.74421 64371.16482 59022.80909 64908.30555 62120.84664 59488.14251 71602.79872 0.77966415 0.980074316 0.960405343 0.688349409 0.899003474 0.824308688 0.906505147 0.867575678 0.830807504 1 16.12772836 -10.91909015 3.51592847 1.001022773 0.862832447 0.209967049 0.081471004 9421294.854 8360258.999 66819.43704 0.019507702 1.20E-11 10.91909015 -0.138190326 LSGLS(ph)FK ddPTM_A459_MK2206_30min_R1 1 LSGLSFK 7 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 LSGLS(1)FK 89.886 0.030375 85487000 8549.7 8270.4 7424.8 6464.4 6339.5 6734.1 8105 6575.9 10491 11701 TRUE FALSE 7822.503119 7731.995457 6920.825263 6962.289208 6086.984291 7115.378923 7564.330238 6518.4076 11581.57699 13150.60822 0.594839645 0.587957251 0.526274158 0.529427164 0.462867131 0.541068429 0.575207634 0.495673469 0.880687555 1 13.68284191 -8.373127292 3.703736727 0.993420238 0.538437575 0.939714436 0.041040193 0.050755852 1.178741459 0.041348553 0.011005442 4.24E-09 8.373127292 -0.454982663 LSGLS(ph)FK ddPTM_A459_MK2206_30min_R2 1 LSGLSFK 7 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 LS(0.002)GLS(0.998)FK 84.817 0.037033 111310000 297490 257190 223900 247050 172530 159730 261130 253080 187000 252150 TRUE FALSE 320266.0631 244418.3186 231364.7143 226865.2247 165755.6053 165808.6371 226843.3173 286158.425 203264.922 243922.3662 1.312983586 1.002033239 0.948517833 0.930071433 0.679542462 0.679759875 0.92998162 1.173153694 0.833318097 1 17.89606252 -4.440220415 1.347550488 0.885098243 1.866482571 0.455101246 0.13757417 2.910019862 2.580672711 0.043915917 4.876300089 3.63E-05 4.440220415 0.981384328 LSGNTHYTPLCAPT(ph)SPNK ddPTM_A459_MK2206_30min_R2 1 LSGNTHYTPLCAPTSPNK 18 0 Q4AC94;Q4AC94-2;Q4AC94-4;Q4AC94-1;Q4AC94-3 Q4AC94 C2CD3 C2 domain-containing protein 3 1 LSGNTHYTPLCAPT(0.5)S(0.5)PNK 97.235 0.0048324 13281000 20296 39688 43518 48868 51157 50415 57833 37229 39562 36976 TRUE FALSE 21849.87736 37717.15163 44968.8684 44875.32808 49148.31914 52333.57815 50239.45763 42094.95813 43003.03125 35769.47615 0.610852596 1.054450769 1.257185546 1.254570458 1.374029604 1.463079245 1.404534342 1.176840219 1.202227035 1 15.12644137 -4.670528995 1.555685791 1.293656211 0.207294499 0.715138475 0.125432033 0.742675041 1.395029378 0.03595539 1.341631838 2.14E-05 4.670528995 -1.086361712 LSGNTHYTPLCAPTS(ph)PNK ddPTM_A459_MK2206_30min_R2 1 LSGNTHYTPLCAPTSPNK 18 0 Q4AC94;Q4AC94-2;Q4AC94-4;Q4AC94-1;Q4AC94-3 Q4AC94 C2CD3 C2 domain-containing protein 3 1 LSGNTHYTPLCAPT(0.056)S(0.944)PNK 118.76 0.00065492 11805000 34629 72454 49872 74167 95414 87054 95939 64103 69676 62306 TRUE FALSE 37280.22287 68856.03972 51534.70759 68107.31885 91667.56694 90366.90097 83342.09406 72481.4822 75736.29253 60272.96032 0.618523176 1.142403482 0.855022008 1.129981313 1.520873812 1.499294219 1.382744329 1.202553878 1.256555048 1 15.8792233 -5.968985358 4.223949271 1.334246315 0.903319738 0.524606267 0.184894976 0.164136779 6.670918401 0.053445292 0.078942304 1.07E-06 5.968985358 -0.430926577 LSGS(ph)RQDLIPSYSLGSNK ddPTM_A459_MK2206_30min_R1 1 LSGSRQDLIPSYSLGSNK 18 1 Q9NQT8;H0YBA8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 LS(0.097)GS(0.903)RQDLIPSYSLGSNK 103.24 0.0011577 16662000 5803.7 5816.9 5683.6 5424.8 7033.8 6324.9 6015.4 5796.3 5019.2 3956.8 TRUE FALSE 5310.064839 5438.218753 5297.813067 5842.619036 6753.628852 6683.010372 5614.123642 5745.62356 5540.963801 4446.998256 1.194078462 1.222896534 1.191323397 1.313834344 1.518693838 1.502813805 1.262452405 1.292022895 1.246000894 1 12.11861612 -8.850126354 1.390670418 1.000365494 1.319401549 0.426629686 0.108672079 1.330323582 4.097138557 0.119333748 0.035170954 1.41E-09 8.850126354 0.319036055 LSGS(ph)RQDLIPSYSLGSNK ddPTM_A459_MK2206_30min_R2 1 LSGSRQDLIPSYSLGSNK 18 1 Q9NQT8;H0YBA8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 LS(0.145)GS(0.855)RQDLIPSYSLGSNK 141.79 0.00016874 11121000 38016 53806 47673 50182 49410 59895 49071 41069 43159 39006 TRUE FALSE 40926.53419 51134.07228 49262.39403 46081.97008 47469.91513 62174.3462 42627.91876 46436.85931 46912.89181 37733.23741 1.084628222 1.355146703 1.305543796 1.221256728 1.258039818 1.647734211 1.129718033 1.230661944 1.243277678 1 15.20354826 -8.927811273 0.9257205 1.000780651 1.295494046 0.25374761 0.144008541 1.909826866 2.743647155 0.141040713 0.046069865 1.18E-09 8.927811273 0.294713394 LSGSNPYTTVT(ph)PQIINSK ddPTM_A459_MK2206_30min_R1 1 LSGSNPYTTVTPQIINSK 18 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 1 LSGSNPYTT(0.002)VT(0.979)PQIINS(0.019)K 184.97 3.28E-14 0 582.8 873.27 996.96 599.83 636.04 426.19 896.4 727.87 1007.9 1070.1 TRUE FALSE 533.2297996 816.4199643 929.2891329 646.0290105 610.70518 450.3205095 836.6027916 721.5063093 1112.674812 1202.672067 0.443370902 0.678838386 0.772687051 0.537161399 0.507790275 0.374433332 0.69562004 0.599919404 0.925168916 1 10.2320276 -8.302062174 2.554989848 1.006089266 0.574414081 0.652906819 0.113348603 0.181958743 2.202866553 0.112277096 0.031691897 4.99E-09 8.302062174 -0.431675185 LSHS(ph)DEKPYQCPVCQQR ddPTM_A459_MK2206_30min_R2 2 LSHSDEKPYQCPVCQQR 17 1 I3L2Z5;A0A087WWR2;P56270-3;P56270;P56270-2 I3L2Z5 MAZ Myc-associated zinc finger protein 1 LS(0.093)HS(0.907)DEKPYQCPVCQQR;LS(0.255)HS(0.736)DEKPY(0.009)QCPVCQQR 65.528 0.018511 7069900 18011.6 15325.4 13410.8 17785.7 13287.1 11053.7 16935.8 10453.6 10939.2 16144.6 TRUE FALSE 19390.58194 14564.36292 13857.90938 16332.55142 12765.38169 11474.3563 14712.10912 11819.92141 11890.67184 15617.80302 1.241569119 0.932548765 0.887314903 1.045764977 0.81736091 0.734697209 0.942008879 0.756823568 0.761353682 1 13.9309039 -1.522878745 0.727729986 0.840666753 57.95494591 0.552841174 0.099936857 251.3048315 1.19107333 0.038306894 23457.17616 0.03 1.522878745 57.11427916 LSKPPFQTNPS(ph)PEMVSK ddPTM_A459_MK2206_30min_R1 1 LSKPPFQTNPSPEMVSK 17 1 Q4LE39-2;Q4LE39;H0Y7Y8;Q4LE39-4;Q4LE39-3 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 LSKPPFQTNPS(1)PEMVSK 131.41 0.00043214 43846000 6071.9 5459.1 5478.9 4782.9 5229.8 5398.7 6030.6 5350.3 5577.4 5355.4 TRUE FALSE 5555.45302 5103.711598 5107.007533 5151.279787 5021.485992 5704.369729 5628.309677 5303.522891 6157.190689 6018.867383 0.923006384 0.84795216 0.84849976 0.855855339 0.834290851 0.947748034 0.935111096 0.881149651 1.022981617 1 12.55527631 -7.804465047 0.715793333 1.00645666 0.862111847 0.593860534 0.040414689 0.4779065 0.479608398 0.037876716 0.018123584 1.57E-08 7.804465047 -0.144344813 LSKPPFQTNPS(ph)PEMVSK ddPTM_A459_MK2206_30min_R2 2 LSKPPFQTNPSPEMVSK 17 1 Q4LE39-2;Q4LE39;H0Y7Y8;Q4LE39-4;Q4LE39-3 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 LSKPPFQTNPS(0.992)PEMVS(0.008)K;LSKPPFQT(0.009)NPS(0.984)PEMVS(0.007)K 147.08 0.00022163 63103000 140357 129432 139884 176575 151722 124943 156268 121483 121989 156436 TRUE FALSE 151102.8398 123004.5951 144547.6627 162148.2577 145764.6319 129697.7934 135749.8239 137361.2452 132599.3827 151331.5061 0.998488971 0.812815508 0.9551723 1.071477195 0.963214044 0.857044225 0.897036099 0.907684386 0.876217954 1 17.20735285 -6.732106232 24.7875411 0.901166764 0.957942758 0.122322024 0.069302411 416.3135158 351798.4701 0.023812263 0.023808472 1.85E-07 6.732106232 0.056775994 LSKS(ph)DEQLSSLDR ddPTM_A459_MK2206_30min_R1 1 LSKSDEQLSSLDR 13 1 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 LS(0.002)KS(0.998)DEQLSSLDR 111.81 0.027035 0 466.89 556.18 472.37 377.87 453.15 620.68 443.15 513.75 465.04 829.61 TRUE FALSE 427.1785538 519.9725809 440.3068405 406.9736129 435.1000759 655.8223652 413.5882721 509.2583379 513.3825722 932.38835 0.458155182 0.557678119 0.472235459 0.43648509 0.466651129 0.703378979 0.443579408 0.546186938 0.550610239 1 9.864787168 -14.52287875 0.292197282 4.839986843 0.488628203 0.798897648 0.073675786 108.0848582 1.013752278 253.1326116 0.077810067 3.00E-15 14.52287875 -4.35135864 LSLEGDHS(ph)TPPSAYGSVK ddPTM_A459_MK2206_30min_R1 4 LSLEGDHSTPPSAYGSVK 18 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LSLEGDHS(0.991)T(0.009)PPSAYGSVK;LS(0.386)LEGDHS(0.61)T(0.004)PPSAYGSVK;LSLEGDHS(0.993)T(0.007)PPSAYGSVK;LSLEGDHS(0.851)T(0.149)PPSAYGSVK 272.16 3.74E-54 266866500 24161.2 17884.8 22508.5 17174.5 26250.1 23648.2 27132 24211.2 20863.5 22020.7 TRUE FALSE 22106.16306 16720.49627 20980.68573 18497.28297 25204.50293 24987.14065 25322.07379 23999.52403 23032.33549 24748.79056 0.893221954 0.675608621 0.8477459 0.747401491 1.018413521 1.009630777 1.02316409 0.969725125 0.930644891 1 14.5950704 -6.263778982 24.99863928 0.992862765 0.786806311 0.733021292 0.059384449 100.5091845 1073939.078 0.017245057 0.020493541 5.45E-07 6.263778982 -0.206056454 LSLEGDHS(ph)TPPSAYGSVK ddPTM_A459_MK2206_30min_R2 2 LSLEGDHSTPPSAYGSVK 18 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LS(0.001)LEGDHS(0.943)T(0.056)PPSAYGSVK;LS(0.02)LEGDHS(0.672)T(0.308)PPSAYGSVK 157.7 2.02E-05 202659000 652490 746060 709480 883910 732950 727970 981250 711800 751920 865380 TRUE FALSE 702445.1361 709011.7453 733133.7091 811691.7255 704170.7002 755673.4085 852410.6963 804834.704 817320.6424 837142.7215 0.839098421 0.846942495 0.875757132 0.969597781 0.841159676 0.902681692 1.018238198 0.961406799 0.976321745 1 19.67511408 -6.246309077 0.353221329 1.009176416 0.80198444 0.617833727 0.040845679 1.718841042 0.357898901 0.047270297 0.139488419 5.67E-07 6.246309077 -0.207191975 LSLEGDHST(ph)PPSAYGSVK ddPTM_A459_MK2206_30min_R1 1 LSLEGDHSTPPSAYGSVK 18 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LSLEGDHS(0.136)T(0.864)PPSAYGSVK 130.37 0.00079283 85992000 8930.4 7405.9 8267.5 6360.6 9486.7 8568.7 9647.8 8751.5 7843.2 6961.4 TRUE FALSE 8170.822585 6923.774564 7706.325135 6850.494514 9108.824651 9053.852389 9004.212865 8674.986558 8658.528707 7823.830788 1.044350626 0.884959651 0.984981059 0.875593389 1.164241009 1.15721475 1.150870093 1.108790156 1.106686602 1 12.93365945 -6.267313304 24.99988438 1.124014145 0.945685347 0.629025936 0.062636043 278.8448084 1186783.546 0.018184167 0.021158969 5.40E-07 6.267313304 -0.178328798 LSLEGDHSTPPSAY(ph)GSVK ddPTM_A459_MK2206_30min_R1 4 LSLEGDHSTPPSAYGSVK 18 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LSLEGDHSTPPS(0.011)AY(0.76)GS(0.228)VK;LSLEGDHSTPPS(0.004)AY(0.71)GS(0.285)VK;LSLEGDHSTPPS(0.012)AY(0.636)GS(0.351)VK;LSLEGDHSTPPS(0.006)AY(0.98)GS(0.014)VK 190.37 3.20E-09 38553500 17364.09 9904.95 12004.89 9479.3 20006.3 17301.81 17136.43 14785.87 10196.95 9798.73 TRUE FALSE 15887.18296 9260.135955 11190.03151 10209.39733 19209.40671 18281.42353 15993.29002 14656.5987 11256.95944 11012.67065 1.44262763 0.840861972 1.016105164 0.927059172 1.744300481 1.660035437 1.452262628 1.330885047 1.022182521 1 13.42687675 -6.235684324 24.89485003 1.403609128 1.038352047 0.239188538 0.267056141 951.3413102 919566.8688 0.08039179 0.103749368 5.81E-07 6.235684324 -0.365257081 LSLEGDHSTPPSAY(ph)GSVK ddPTM_A459_MK2206_30min_R2 1 LSLEGDHSTPPSAYGSVK 18 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LSLEGDHSTPPSAY(0.675)GS(0.325)VK 121.72 0.0060395 21982000 31061 59121 44456 80652 61633 65081 81611 48451 81819 57225 TRUE FALSE 33439.05404 56185.13711 45938.14085 74062.47361 59212.97874 67557.70306 70895.37767 54783.71206 88935.46873 55357.75294 0.604053674 1.01494613 0.829841141 1.337888004 1.069642021 1.220383767 1.280676579 0.989630344 1.606558504 1 15.75649776 -4.416594793 0.68421825 1.223293269 2.67E-16 0.465976627 0.194637033 4.172136192 1.04167462 0.077410836 4.435013983 3.83E-05 4.416594793 -1.223293269 LSLEGDHSTPPSAYGS(ph)VK ddPTM_A459_MK2206_30min_R1 3 LSLEGDHSTPPSAYGSVK 18 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LSLEGDHSTPPSAYGS(1)VK;LSLEGDHSTPPS(0.018)AY(0.354)GS(0.628)VK;LSLEGDHSTPPS(0.01)AYGS(0.989)VK 302.9 2.55E-174 33735000 18051.7 10199.28 14110.2 8869.58 18065.6 18293.6 16276.1 15328.8 10106.45 9407.33 TRUE FALSE 16516.30812 9535.305018 13152.43894 9552.716588 17346.0089 19329.36782 15190.35107 15194.78192 11157.05164 10572.78106 1.562153612 0.901872928 1.243990475 0.903519758 1.64062878 1.828219814 1.436741287 1.437160368 1.055261769 1 13.36806729 -6.266313936 24.90260228 1.444807869 1.141462412 0.137544459 0.28923819 646.178925 3301122.291 0.088578565 0.103645588 5.42E-07 6.266313936 -0.303345457 LSLEGDHSTPPSAYGS(ph)VK ddPTM_A459_MK2206_30min_R2 5 LSLEGDHSTPPSAYGSVK 18 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LSLEGDHSTPPS(0.005)AY(0.348)GS(0.647)VK;LSLEGDHSTPPS(0.087)AY(0.012)GS(0.901)VK;LSLEGDHSTPPS(0.003)AYGS(0.997)VK;LSLEGDHSTPPS(0.011)AY(0.001)GS(0.988)VK;LSLEGDHSTPPS(0.008)AY(0.001)GS(0.99)VK 112.56 0.00081202 102918000 215443 376339 284690 340280 303285 390937 609796 334765 535136 232425 TRUE FALSE 231937.4817 357650.5525 294181.4225 312478.0355 291376.507 405814.3815 529729.0527 378519.9349 581681.162 224840.9913 1.031562263 1.590682155 1.308397641 1.389773429 1.295922533 1.804895002 2.356016355 1.683500561 2.587077911 1 17.77854556 -6.859294565 4.377449161 1.977195424 1.340931546 0.309705917 0.415378782 0.236263221 8.059548693 0.138579905 0.122647184 1.38E-07 6.859294565 -0.636263877 LSLEGDHSTPPSAYGSVK ddPTM_A459_MK2206_30min_R1 1 LSLEGDHSTPPSAYGSVK 18 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 101.92 0.0034076 31178000 5149.9 3151.7 3855.6 2898.9 6906.7 6062 6148.6 4713 3054.7 2655.6 FALSE TRUE 4711.873962 2946.523757 3593.892614 3122.17378 6631.591514 6405.225201 5738.438113 4671.794738 3372.246996 2984.595777 1.578731029 0.987243827 1.204147189 1.046096026 2.221939589 2.146094708 1.922685195 1.565302335 1.129883994 1 11.54331984 -6.234677518 24.97783182 1.72959006 1.188574615 0.233104829 0.398171873 989.409305 923452.2123 0.121097532 0.156289718 5.83E-07 6.234677518 -0.541015445 LSLEGDHSTPPSAYGSVK ddPTM_A459_MK2206_30min_R2 2 LSLEGDHSTPPSAYGSVK 18 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 98.572 0.0045516 32019000 85735 179532 143106 247545 226126 264719 258320 166848 245096 158866 FALSE TRUE 92298.93752 170616.7019 147877.0826 227319.7816 217247.157 274793.067 224402.2737 188655.6065 266414.007 153682.2154 0.600583075 1.110191582 0.962226385 1.479154768 1.413612866 1.788060292 1.460170737 1.22756954 1.733538304 1 17.2295907 -5.1733919 1.028233279 1.473771508 0.545351295 0.530282636 0.240003792 0.814393725 1.066528275 0.0793532 0.721786847 6.71E-06 5.1733919 -0.928420213 LSLFPAS(ph)PR ddPTM_A459_MK2206_30min_R1 1 LSLFPASPR 9 0 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 LSLFPAS(1)PR 121.29 0.0063098 8995200 5251.6 4810.6 5690.2 4738.1 5306.9 4698.7 5142.3 5232.7 4606.9 3921.5 TRUE FALSE 4804.923843 4497.429066 5303.965078 5103.029283 5095.514935 4964.736333 4799.26655 5186.951056 5085.803741 4407.325026 1.090213183 1.020444156 1.203443142 1.157851816 1.156146848 1.126473837 1.088929571 1.176893246 1.153943426 1 12.10568758 -5.248732472 24.99494922 1.13919075 1.055328669 0.231961876 0.055586931 994.2650129 1955748.358 0.013331638 0.034790077 5.64E-06 5.248732472 -0.083862082 LSLFPAS(ph)PR ddPTM_A459_MK2206_30min_R2 1 LSLFPASPR 9 0 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 LSLFPAS(1)PR 98.754 0.019417 5259000 14323 17637 14925 17284 16423 19152 16574 12434 14514 15724 TRUE FALSE 15419.57989 16761.17223 15422.59205 15871.84191 15778.1505 19880.84278 14397.81389 14059.16649 15776.40148 15210.92717 1.013717292 1.101916539 1.013915318 1.043449997 1.037290517 1.307010583 0.946544135 0.924280705 1.037175532 1 13.89282047 LSLGQY(ph)DNDAGGQLPFSK ddPTM_A459_MK2206_30min_R1 1 LSLGQYDNDAGGQLPFSK 18 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 LSLGQY(1)DNDAGGQLPFSK 128.74 0.0092902 7847400 1022.9 1066.5 1016.9 767.48 955.44 937.9 962.49 814.05 998.82 1153.5 TRUE FALSE 935.8969835 997.0706562 947.8756612 826.5914426 917.3828016 991.0030875 898.2840483 806.9328467 1102.650913 1296.404288 0.721917531 0.769104719 0.731157456 0.637603138 0.707636352 0.764424413 0.692904255 0.622439199 0.850545561 1 10.34029998 -8.526018791 4.714180212 0.999731671 0.708817911 0.812038668 0.045114741 0.065599057 5.3732623 0.045683571 0.011902968 2.98E-09 8.526018791 -0.29091376 LSLLS(ph)STSK ddPTM_A459_MK2206_30min_R2 1 LSLLSSTSK 9 0 Q92754-2;Q92754;C9JXZ2;H7C5E5;C1K3N0;A0A6E1XE14;P05549-2;P05549-5;P05549-6;P05549;Q6VUC0;Q7Z6R9;Q92481;Q92481-2 Q92754-2 TFAP2C;TFAP2A;TFAP2E;TFAP2D;TFAP2B Transcription factor AP-2 gamma;Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-delta;Transcription factor AP-2-beta 1 LSLLS(0.593)S(0.401)T(0.003)S(0.002)K 88.155 0.031569 8921200 120450 102830 101800 90574 106810 86214 130810 82954 84541 109930 TRUE FALSE 129671.7446 97723.61173 105193.9612 83173.81447 102616.1027 89494.93418 113634.4899 93796.37262 91894.22336 106342.9931 1.219372719 0.91894735 0.989195039 0.78212783 0.964954058 0.841568697 1.068565841 0.882017422 0.864130496 1 16.69836545 -4.761233112 24.94891083 0.92071714 1.219373042 0.547852236 0.080601154 3.488119679 420884.0715 0.019056974 0.10738197 1.73E-05 4.761233112 0.298655902 LSLLSS(ph)TSK ddPTM_A459_MK2206_30min_R2 1 LSLLSSTSK 9 0 Q92754-2;Q92754;C9JXZ2;H7C5E5;C1K3N0;A0A6E1XE14;P05549-2;P05549-5;P05549-6;P05549;Q6VUC0;Q7Z6R9;Q92481;Q92481-2 Q92754-2 TFAP2C;TFAP2A;TFAP2E;TFAP2D;TFAP2B Transcription factor AP-2 gamma;Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-delta;Transcription factor AP-2-beta 1 LSLLS(0.261)S(0.736)T(0.003)SK 111.52 0.010223 11022000 163000 152750 147820 130460 166610 127990 196100 136020 141840 160020 TRUE FALSE 175479.4053 145164.6571 152748.245 119801.0007 160068.0543 132860.7491 170351.8344 153798.281 154176.9868 154798.5605 1.133598431 0.937764903 0.986754945 0.77391547 1.034040974 0.858281554 1.10047428 0.993538186 0.995984629 1 17.24003253 -7.268045193 24.97029378 1.02196078 0.950252051 0.110473617 0.094766707 1196.059875 4521143.281 0.038239544 0.02643861 5.39E-08 7.268045193 -0.071708729 LSLPGLLSQVS(ph)PR ddPTM_A459_MK2206_30min_R1 2 LSLPGLLSQVSPR 13 0 Q96Q42-3;Q96Q42 Q96Q42-3 ALS2 Alsin 1 LSLPGLLS(0.01)QVS(0.99)PR;LSLPGLLS(0.001)QVS(0.999)PR 161.49 0.00036364 66318000 8147.9 8292.9 8585.7 7380.8 8566.5 7724.5 8405.5 7476 8245.9 8435.3 TRUE FALSE 7454.878319 7753.030703 8002.926605 7949.270495 8225.278165 8161.854515 7844.784432 7410.63812 9103.090813 9480.328647 0.786352309 0.817801892 0.844161305 0.838501574 0.867615298 0.860925272 0.82748022 0.781685783 0.960208359 1 13.21072136 -8.396326055 4.786776254 0.997529667 0.831327759 0.836344712 0.02707287 0.085557376 2.742916793 0.027765136 0.007250063 4.01E-09 8.396326055 -0.166201908 LSLPGLLSQVS(ph)PR ddPTM_A459_MK2206_30min_R2 2 LSLPGLLSQVSPR 13 0 Q96Q42-3;Q96Q42 Q96Q42-3 ALS2 Alsin 1 LSLPGLLSQVS(1)PR;LSLPGLLSQVS(1)PR 184.87 0.00012445 87176000 103735 131186 112041 137922 102574 132366 120358 96485 107733 129601 TRUE FALSE 111677.0314 124671.494 115776.391 126653.3314 98546.42937 137403.2809 104554.85 109095.9208 117103.4216 125372.13 0.89076441 0.994411549 0.923461945 1.010219188 0.786031388 1.09596352 0.83395608 0.870176815 0.934046679 1 16.93585715 LSLS(ph)EGGLVPSSK ddPTM_A459_MK2206_30min_R2 1 LSLSEGGLVPSSK 13 0 Q8WUX9 Q8WUX9 CHMP7 Charged multivesicular body protein 7 1 LS(0.006)LS(0.991)EGGLVPS(0.002)SK 78.401 0.041173 3386800 13186 13761 9762.7 11799 9914.2 9632.1 13971 10046 9317.6 10519 TRUE FALSE 14195.5303 13077.64875 10088.18355 10834.98396 9524.918693 9998.656315 12136.59092 11359.04669 10128.02801 10175.76589 1.395033106 1.285175867 0.991393046 1.06478314 0.936039488 0.982594964 1.192695572 1.116284201 0.995308669 1 13.31284976 -5.121887085 3.664616234 1.040476804 1.376784382 0.748528536 0.07174511 0.12205732 2.864672829 0.020216333 0.066358753 7.55E-06 5.121887085 0.336307578 LSLS(ph)PLR ddPTM_A459_MK2206_30min_R1 1 LSLSPLR 7 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 LS(0.012)LS(0.988)PLR 106.68 0.017017 11181000 4950.6 4806.9 4231.8 3832.4 4897.4 4005 4815 3665.7 4030.2 4109.1 TRUE FALSE 4529.525473 4493.969936 3944.557206 4127.572112 4702.326188 4231.759639 4493.800135 3633.651171 4449.153712 4618.16633 0.980806049 0.97310699 0.854139268 0.893768612 1.018223652 0.916328979 0.973070222 0.786816869 0.963402657 1 12.17310442 LSLS(ph)PLR ddPTM_A459_MK2206_30min_R2 2 LSLSPLR 7 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 LS(0.046)LS(0.954)PLR;LS(0.046)LS(0.954)PLR 88.177 0.03262 293380000 105570 135086 116755 130075 124501 115614 128735 99139 103273 101526 TRUE FALSE 113652.5204 128377.8257 120647.5534 119447.4564 119612.4652 120013.7718 111831.9399 112096.8077 112255.4989 98213.21493 1.157201915 1.307133931 1.228424846 1.216205543 1.217885651 1.221971726 1.138664893 1.141361758 1.142977541 1 16.58362954 -8.550072114 0.40707543 0.987715553 1.245724416 0.760291926 0.038059377 0.628706186 0.270112959 0.056968838 0.02918273 2.82E-09 8.550072114 0.258008863 LSMEDS(ph)KSPPPKATEEK ddPTM_A459_MK2206_30min_R1 1 LSMEDSKSPPPKATEEK 17 2 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 LS(0.029)MEDS(0.844)KS(0.127)PPPKATEEK 78.249 0.021473 16841000 4023.1 4342.9 5065.2 4976.2 3308.8 2342.2 3069.4 4355.2 2798 1752.4 TRUE FALSE 3680.914219 4060.176421 4721.388336 5359.467786 3177.00349 2474.81334 2864.645926 4317.122946 3088.862113 1969.500542 1.868958216 2.061525922 2.397251606 2.721231943 1.613101099 1.256569007 1.454503751 2.191988707 1.568347937 1 10.9436141 -6.377952448 7.813113222 1.552778401 2.256161892 0.51948999 0.351664546 0.25883193 15.82629532 0.114707712 0.130040123 4.19E-07 6.377952448 0.703383492 LSMEDSKS(ph)PPPKATEEK ddPTM_A459_MK2206_30min_R1 1 LSMEDSKSPPPKATEEK 17 2 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 LS(0.019)MEDS(0.291)KS(0.69)PPPKATEEK 87.496 0.011977 15510000 3965.7 4474.5 5190.6 4574.7 3182.5 2519.8 2386.3 4699.1 3013.1 1580.5 TRUE FALSE 3628.39639 4183.209237 4838.276534 4927.044187 3055.734286 2662.468898 2227.114281 4658.016264 3326.322527 1776.304272 2.042666027 2.355007136 2.723788154 2.773761379 1.720276382 1.498881098 1.253790984 2.62230764 1.872608527 1 10.79466301 -6.276496715 23.48174392 1.713928548 2.483175922 0.442986263 0.443942412 375.6137549 585763.6086 0.142984806 0.162892783 5.29E-07 6.276496715 0.769247374 LSMLS(ph)QEIQTLK ddPTM_A459_MK2206_30min_R1 1 LSMLSQEIQTLK 12 0 Q7Z674;F8W6C0;G3V0F5;Q9UHY8;Q9UHY8-2 Q7Z674 DKFZp779C2259;FEZ2 Fasciculation and elongation protein zeta-2 1 LS(0.001)MLS(0.999)QEIQTLK 108.97 0.0078361 7907100 3376.8 3805.2 4272.9 3847.3 3811.7 2345 3574.5 4166.8 3219.3 2457.9 TRUE FALSE 3089.585428 3557.480788 3982.867453 4143.619713 3659.871918 2477.771873 3336.051627 4130.370107 3553.957755 2762.403208 1.118441152 1.287820973 1.441812492 1.500005394 1.324886934 0.896962422 1.207662812 1.495208989 1.286545623 1 11.4317082 -6.550918125 24.99994148 1.199103398 1.349923165 0.157732787 0.177408621 468.3508914 417578.8244 0.062987619 0.062988744 2.81E-07 6.550918125 0.150819767 LSMLS(ph)QEIQTLK ddPTM_A459_MK2206_30min_R2 1 LSMLSQEIQTLK 12 0 Q7Z674;F8W6C0;G3V0F5;Q9UHY8;Q9UHY8-2 Q7Z674 DKFZp779C2259;FEZ2 Fasciculation and elongation protein zeta-2 1 LS(0.001)MLS(0.987)QEIQT(0.012)LK 77.192 0.04632 9124300 22462 34505 30144 40409 34735 31045 32162 28890 32314 33024 TRUE FALSE 24181.70799 32791.53187 31148.98591 37107.45544 33371.12937 32226.43923 27939.09077 32666.02219 35124.61331 31946.42958 0.756945559 1.026453732 0.975038097 1.161552509 1.044596526 1.008764975 0.874560667 1.022524978 1.099484786 1 14.96336708 -4.760946194 24.97032888 1.022686472 0.756945254 0.558545723 0.07113096 9.460900438 478530.7062 0.018665769 0.107386953 1.73E-05 4.760946194 -0.265741218 LSMPQSAAVS(ph)TTPPHNR ddPTM_A459_MK2206_30min_R2 1 LSMPQSAAVSTTPPHNR 17 0 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 LSMPQS(0.002)AAVS(0.498)T(0.25)T(0.25)PPHNR 115.04 0.0016766 6597900 6617.1 9582.1 7308.9 12759 10401 8997.4 8225.7 7473.4 10484 8728.1 TRUE FALSE 7123.710264 9106.266848 7552.575078 11716.54889 9992.604479 9339.802362 7145.655709 8450.19904 11395.87937 8443.302812 0.843711332 1.078519514 0.894504822 1.387673657 1.183494742 1.106178775 0.846310486 1.000816769 1.3496945 1 13.04359174 -4.23957794 1.272240403 1.102525137 0.268566529 0.172287583 0.166550242 9.381508497 5.081427842 0.050623893 14.33126677 5.76E-05 4.23957794 -0.833958608 LSMPQSAAVST(ph)TPPHNR ddPTM_A459_MK2206_30min_R1 1 LSMPQSAAVSTTPPHNR 17 0 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 LSMPQS(0.001)AAVS(0.104)T(0.629)T(0.266)PPHNR 100.41 0.010284 3055000 804.54 537.72 823.68 796.88 716.17 696.5 789.06 562.62 517.93 715.87 TRUE FALSE 736.1096482 502.7143303 767.7708965 858.2558357 687.6434324 735.9352281 736.4232471 557.7010727 571.7706769 804.5573801 0.914924984 0.624833409 0.954277365 1.066742854 0.854685383 0.914708194 0.915314762 0.693177499 0.710664884 1 9.652051506 -7.741743987 24.94974041 0.776440855 0.890450325 0.08350157 0.130394824 473.3331292 599610.6017 0.062810742 0.036198653 1.81E-08 7.741743987 0.114009471 LSMPQSAAVST(ph)TPPHNR ddPTM_A459_MK2206_30min_R2 3 LSMPQSAAVSTTPPHNR 17 0 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 LSMPQSAAVST(0.5)T(0.5)PPHNR;LSMPQSAAVS(0.164)T(0.506)T(0.33)PPHNR;LSMPQSAAVS(0.051)T(0.701)T(0.248)PPHNR 135.98 0.0006984 30438400 55608 86890 57980 89188 85425 88734 95543 62233 74200 65490 TRUE FALSE 59865.39124 82575.16895 59913.02426 81901.0551 82070.78527 92110.83455 82998.08933 70367.06678 80653.78188 63353.06666 0.944948593 1.303412341 0.94570046 1.292771754 1.295450869 1.453928585 1.310087952 1.110712874 1.2730841 1 15.95112684 -5.788723537 24.88964489 1.265762082 1.088559547 0.231797938 0.14862716 289.4329602 264030.5581 0.040941151 0.060742698 1.63E-06 5.788723537 -0.177202536 LSMPQSAAVSTT(ph)PPHNR ddPTM_A459_MK2206_30min_R2 4 LSMPQSAAVSTTPPHNR 17 0 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 LSMPQSAAVS(0.006)T(0.244)T(0.75)PPHNR;LSMPQSAAVS(0.012)T(0.229)T(0.759)PPHNR;LSMPQSAAVS(0.001)T(0.039)T(0.96)PPHNR;LSMPQSAAVS(0.241)T(0.241)T(0.519)PPHNR 161.48 4.87E-05 22926100 53595.7 69515 70572.2 79503.4 69685.6 87276.8 73918.2 59715 73626.6 65651.8 TRUE FALSE 57699.028 66062.98618 72925.04193 73007.7179 66949.3932 90598.17978 64212.65155 67519.95553 80030.50858 63509.58714 0.908508945 1.040204938 1.148252496 1.149554283 1.054161997 1.426527614 1.011070209 1.063145874 1.260132717 1 15.95468677 -4.875801392 1.973844303 1.145268924 0.863762537 0.259727224 0.12115329 0.817345517 4.085439332 0.032091461 0.396068077 1.33E-05 4.875801392 -0.281506387 LSPAT(ph)PTSEGPK ddPTM_A459_MK2206_30min_R1 1 LSPATPTSEGPK 12 0 Q8N1G0;Q8N1G0-2;F8WCX2 Q8N1G0 ZNF687 Zinc finger protein 687 1 LSPAT(0.683)PT(0.251)S(0.066)EGPK 156 0.0010086 7830800 7746.4 8143.8 7297.7 6817.6 7293.4 6372.6 7121.4 6872.4 6864.7 5974.3 TRUE FALSE 7087.528002 7613.63714 6802.352457 7342.692733 7002.888434 6733.411105 6646.3444 6812.315331 7578.310131 6714.441388 1.055564803 1.133919667 1.013092834 1.09356718 1.042959202 1.002825212 0.989858131 1.014576632 1.128658319 1 12.71305166 -6.477384938 6.039514294 1.02539532 1.073582754 0.18691529 0.046071532 0.356742355 32.98263108 0.014547376 0.016195658 3.33E-07 6.477384938 0.048187434 LSPAT(ph)PTSEGPK ddPTM_A459_MK2206_30min_R2 2 LSPATPTSEGPK 12 0 Q8N1G0;Q8N1G0-2;F8WCX2 Q8N1G0 ZNF687 Zinc finger protein 687 1 LSPAT(0.764)PT(0.191)S(0.045)EGPK;LSPAT(0.991)PT(0.007)S(0.002)EGPK 135.02 0.0035665 17144700 211703 212349 228012 197611 191660 136146 226851 163510 151632 198765 TRUE FALSE 227911.1445 201804.0574 235613.8063 181465.5492 184134.4654 141327.1314 197065.1912 184881.3184 164820.6773 192279.3143 1.185312862 1.049535974 1.225372615 0.943760122 0.957640535 0.735009545 1.024890233 0.961524744 0.857194014 1 17.55284404 -5.837824917 6.828430471 0.92014228 1.142353052 0.58694085 0.087392814 0.148944628 10.82134454 0.024317362 0.036452125 1.45E-06 5.837824917 0.222210772 LSPATPTS(ph)EGPK ddPTM_A459_MK2206_30min_R2 1 LSPATPTSEGPK 12 0 Q8N1G0;Q8N1G0-2;F8WCX2 Q8N1G0 ZNF687 Zinc finger protein 687 1 LSPAT(0.233)PT(0.233)S(0.535)EGPK 133.15 0.0017828 3497500 50860 51241 43524 46432 49390 39286 54501 38969 36046 45585 TRUE FALSE 54753.8807 48696.44645 44975.06844 42638.35707 47450.70044 40781.05626 47344.95323 44062.3821 39181.21592 44097.56518 1.24165315 1.10428878 1.019899132 0.966909554 1.076039011 0.924791564 1.073640983 0.999202154 0.888512002 1 15.42841138 -4.752342804 1.395508652 0.992604798 1.360138397 0.672359157 0.05471012 0.777963104 1.301911337 0.015473035 0.413225955 1.77E-05 4.752342804 0.367533599 LSPIAPAPGFS(ph)PSAAK ddPTM_A459_MK2206_30min_R2 2 LSPIAPAPGFSPSAAK 16 0 Q13118-2;Q13118 Q13118-2 KLF10 Krueppel-like factor 10 1 LSPIAPAPGFS(0.5)PS(0.5)AAK;LS(0.007)PIAPAPGFS(0.916)PS(0.077)AAK 116.96 0.0018798 6918200 40844 48468 43342 47687 58879 51768 53869 36799 45785 48612 TRUE FALSE 43971.04804 46061.1496 44787.00065 43790.81956 56567.11462 53738.06752 46795.93559 41608.75565 49767.29654 47025.79442 0.935041047 0.9794869 0.952392218 0.931208502 1.20289546 1.142735985 0.995112069 0.884807076 1.058297837 1 15.5211647 LSPLPPGS(ph)PGSAAR ddPTM_A459_MK2206_30min_R2 2 LSPLPPGSPGSAAR 14 0 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 LSPLPPGS(0.995)PGS(0.005)AAR;LSPLPPGS(0.97)PGS(0.03)AAR 222.55 4.81E-09 20821000 50671 58389 59394 69454 74236 63984 67814 49541 58217 63793 TRUE FALSE 54550.41072 55489.48717 61374.16632 63779.38603 71321.12163 66418.95596 58909.94034 56016.1788 63280.60943 61711.43963 0.883959458 0.899176676 0.994534671 1.033509936 1.155719621 1.076282718 0.954603242 0.907711425 1.025427535 1 15.91325033 -5.30194164 3.019275297 1.022717482 0.885598237 0.403669594 0.062544766 0.291838155 5.27351265 0.019544993 0.05378718 4.99E-06 5.30194164 -0.137119245 LSPLPPGSPGS(ph)AAR ddPTM_A459_MK2206_30min_R1 1 LSPLPPGSPGSAAR 14 0 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 LSPLPPGS(0.126)PGS(0.874)AAR 116.79 0.0026 10466000 3115.1 2695.8 2884.6 2355.1 2808.4 2684.3 3095.6 2442.4 2336.9 1901 TRUE FALSE 2850.144387 2520.30293 2688.801389 2536.49021 2696.535481 2836.282746 2889.098172 2421.046354 2579.829118 2136.510232 1.334018599 1.17963532 1.258501527 1.187211824 1.262121492 1.327530617 1.352251035 1.133177983 1.20749673 1 11.06104051 -8.718894192 1.160435724 1.002746363 1.261022276 0.583871805 0.06576426 0.5589227 1.482284203 0.064035566 0.019917154 1.91E-09 8.718894192 0.258275913 LSPPVASGGIPHQS(ph)PPTK ddPTM_A459_MK2206_30min_R1 2 LSPPVASGGIPHQSPPTK 18 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LSPPVAS(0.001)GGIPHQS(0.929)PPT(0.069)K;LSPPVASGGIPHQS(0.96)PPT(0.04)K 176.68 2.20E-09 28504500 7197.9 5844.5 6226 5294.7 6475.7 6285.2 7559.8 6333.2 4886.2 5246.9 TRUE FALSE 6585.680807 5464.021988 5803.396467 5702.498711 6217.759156 6641.062592 7055.499536 6277.8295 5394.137975 5896.925584 1.116799036 0.926588255 0.984139342 0.967029112 1.054406922 1.126190673 1.196470845 1.064593645 0.914737332 1 12.52574727 -6.40271504 5.267651168 1.074600007 0.992943141 0.099912861 0.083239861 0.433500386 16.9456228 0.027162636 0.030768554 3.96E-07 6.40271504 -0.081656866 LSPPVASGGIPHQS(ph)PPTK ddPTM_A459_MK2206_30min_R2 1 LSPPVASGGIPHQSPPTK 18 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LSPPVASGGIPHQS(0.989)PPT(0.011)K 95.51 0.0026351 28606000 51518 67661 61062 66909 69514 60801 68461 51561 53595 62439 TRUE FALSE 55462.25769 64301.05313 63097.7766 61442.32067 66784.53108 63114.82466 59471.98846 58300.19974 58256.59622 60401.62054 0.918224663 1.06455841 1.044637148 1.017229672 1.105674491 1.044919393 0.984609153 0.965209198 0.964487305 1 15.88229964 -7.331836796 4.924126655 0.97434776 1.037142419 0.246275107 0.045805915 0.294165209 13.66348584 0.019649886 0.013117953 4.66E-08 7.331836796 0.06279466 LSPPYS(ph)SPQEFAQDVGR ddPTM_A459_MK2206_30min_R1 2 LSPPYSSPQEFAQDVGR 17 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 LSPPYS(0.884)S(0.115)PQEFAQDVGR;LSPPYS(0.991)S(0.009)PQEFAQDVGR 181.81 7.20E-08 16926400 2820.3 2827.4 2930.5 2514.3 2969.6 2447.3 2517.6 2462.6 2507.75 2312.7 TRUE FALSE 2580.418675 2643.335746 2731.585825 2707.951822 2851.314544 2585.864011 2349.655498 2441.069748 2768.439587 2599.214736 0.992768562 1.016974746 1.050927339 1.041834591 1.096990758 0.994863554 0.903986679 0.939156628 1.065106145 1 11.34386011 -6.990445838 24.9098534 0.968768227 1.04000396 0.289919167 0.046326675 230.3870146 600668.0167 0.016729693 0.014736733 1.02E-07 6.990445838 0.071235733 LSPPYS(ph)SPQEFAQDVGR ddPTM_A459_MK2206_30min_R2 1 LSPPYSSPQEFAQDVGR 17 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 LSPPYS(0.5)S(0.5)PQEFAQDVGR 85.176 0.011869 4086900 14665 18609 19281 19614 16044 18122 20738 16008 19393 17886 TRUE FALSE 15787.76368 17684.90412 19923.81892 18011.47346 15414.03195 18811.64541 18015.07569 18100.30056 21079.76809 17302.38128 0.912461898 1.022108103 1.151507332 1.040982346 0.890861881 1.087228694 1.041190539 1.046116154 1.218316007 1 14.07868299 -8.022878527 23.56517518 1.116844069 1.025679174 0.136519456 0.086632301 707.4884596 728714.0752 0.057126409 0.021989242 9.49E-09 8.022878527 -0.091164895 LSPPYSS(ph)PQEFAQDVGR ddPTM_A459_MK2206_30min_R2 1 LSPPYSSPQEFAQDVGR 17 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 LSPPYS(0.18)S(0.82)PQEFAQDVGR 130.64 0.00084544 3672100 11636 14626 15361 13917 12898 12099 15318 13821 11368 13832 TRUE FALSE 12526.86111 13899.69411 15873.12807 12779.93658 12391.55971 12559.43592 13306.7282 15627.45215 12356.76809 13380.66297 0.936191363 1.038789643 1.186273663 0.955104886 0.926079652 0.938625833 0.994474506 1.167913143 0.92347951 1 13.70786198 LSPS(ph)PSSR ddPTM_A459_MK2206_30min_R1 4 LSPSPSSR 8 0 Q03252;P20700 Q03252;P20700 LMNB2;LMNB1 Lamin-B2;Lamin-B1 1 LS(0.003)PS(0.993)PS(0.004)SR;LS(0.009)PS(0.917)PS(0.073)S(0.001)R;LS(0.002)PS(0.951)PS(0.047)S(0.001)R;LS(0.002)PS(0.963)PS(0.035)SR 140.11 0.002362 651072000 19226 20138.2 18106.1 15502.3 19493.7 17223.5 19301.7 16558.8 15197 14548.7 TRUE FALSE 17590.72774 18827.19952 16877.10838 16696.28983 18717.22465 18198.67969 18014.11881 16414.02816 16776.78253 16351.10279 1.075812926 1.151433011 1.032169426 1.021110933 1.144707173 1.112994023 1.101706658 1.003848387 1.026033702 1 13.99710032 -7.762617398 24.99931905 1.011205764 1.091623736 0.463710716 0.040136988 30.4109132 645311.6992 0.021715543 0.011351294 1.73E-08 7.762617398 0.080417972 LSPS(ph)PSSR ddPTM_A459_MK2206_30min_R2 1 LSPSPSSR 8 0 Q03252;P20700 Q03252;P20700 LMNB2;LMNB1 Lamin-B2;Lamin-B1 1 LS(0.022)PS(0.925)PS(0.048)S(0.005)R 125.68 0.0050277 371700000 1473800 2019700 1833100 2318700 2044600 2090300 2455200 1352900 1774800 2138800 TRUE FALSE 1586635.261 1919404.635 1894214.639 2129254.793 1964318.731 2169847.831 2132829.291 1529728.675 1929168.896 2069011.131 0.766856803 0.927691788 0.915516891 1.029117128 0.949399789 1.048736664 1.030844764 0.739352559 0.932411076 1 20.98050998 -4.529299007 1.830417756 0.955079164 0.581979408 0.309720485 0.084070965 2.652445031 5.168027711 0.024125938 2.126705409 2.96E-05 4.529299007 -0.373099755 LSPS(ph)PTSQR ddPTM_A459_MK2206_30min_R1 7 LSPSPTSQR 9 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LS(0.014)PS(0.982)PT(0.005)SQR;LS(0.121)PS(0.879)PTSQR;LS(0.001)PS(0.999)PTSQR;LS(0.018)PS(0.982)PTSQR;LS(0.002)PS(0.998)PTSQR;LSPS(1)PTSQR;LS(0.076)PS(0.915)PT(0.009)SQR 180.66 0.00082205 3392535000 33357.8 31664.1 32012.2 26606.4 33389.2 29036.5 31645.7 29476.3 25219.6 22564.4 TRUE FALSE 30520.54394 29602.76133 29839.30106 28655.62954 32059.23746 30680.52154 29534.67309 29218.59182 27841.26767 25359.84822 1.203498683 1.167308301 1.176635632 1.129960609 1.264173081 1.209806986 1.164623417 1.15215957 1.097848356 1 14.63025849 -8.507913557 1.21914874 1.000846332 1.189348643 0.764573876 0.032868129 0.24251669 0.790913074 0.032746589 0.010211475 3.11E-09 8.507913557 0.188502311 LSPS(ph)PTSQR ddPTM_A459_MK2206_30min_R2 6 LSPSPTSQR 9 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LS(0.033)PS(0.963)PT(0.004)SQR;LS(0.004)PS(0.991)PT(0.005)SQR;LS(0.003)PS(0.873)PT(0.116)S(0.008)QR;LS(0.077)PS(0.923)PTSQR;LS(0.025)PS(0.951)PT(0.025)SQR;LS(0.046)PS(0.954)PTSQR 136.81 0.002608 1543799300 724499 927637 812230 906369 810854 898059 788848 637923 752151 799360 TRUE FALSE 779967.2005 881571.8955 839309.3428 832315.7534 779015.7977 932235.2645 685271.31 721301.7264 817571.7344 773276.9487 1.008651819 1.14004678 1.085392943 1.076348849 1.007421467 1.205564534 0.886191307 0.93278576 1.057281917 1 19.56062568 -7.274196326 24.99159408 0.963463565 1.085431332 0.417667381 0.068210629 751.4399643 1472107.813 0.02756395 0.018717595 5.32E-08 7.274196326 0.121967767 LSPS(ph)PTTEDPR ddPTM_A459_MK2206_30min_R1 2 LSPSPTTEDPR 11 0 F6RRE2;E7EV10;Q9BTC8;E7EQY4;Q9BTC8-2 F6RRE2 MTA3 Metastasis-associated protein MTA3 1 LS(0.064)PS(0.403)PT(0.268)T(0.265)EDPR;LS(0.004)PS(0.951)PT(0.042)T(0.004)EDPR 171.62 0.00029528 19092500 5990.8 6276.1 6145.6 4336.4 5299.6 4973.4 6861.4 5030.3 6314.4 6747.5 TRUE FALSE 5481.251001 5867.524749 5728.453795 4670.390279 5088.50571 5254.98961 6403.688525 4986.320617 6970.804476 7583.431241 0.722792998 0.773729538 0.755390748 0.61586769 0.671003079 0.692956716 0.844431541 0.657528295 0.919215096 1 12.88863505 -8.411527026 4.086640397 0.99735447 0.718844981 0.717122657 0.061815575 0.11591452 3.105859556 0.061475402 0.016156743 3.88E-09 8.411527026 -0.27850949 LSPS(ph)PTTEDPR ddPTM_A459_MK2206_30min_R2 2 LSPSPTTEDPR 11 0 F6RRE2;E7EV10;Q9BTC8;E7EQY4;Q9BTC8-2 F6RRE2 MTA3 Metastasis-associated protein MTA3 1 LSPS(0.522)PT(0.258)T(0.22)EDPR;LS(0.002)PS(0.682)PT(0.158)T(0.158)EDPR 105.46 0.011682 31615000 79311 81538 70679 86742 70647 73628 77136 58075 52678 77269 TRUE FALSE 85383.11114 77488.94149 73035.40258 79654.90113 67873.04381 76429.96513 67007.95054 65665.6019 57259.83722 74747.71886 1.142283837 1.036672994 0.97709206 1.065649927 0.908028296 1.022505654 0.896454789 0.8784964 0.766041266 1 16.18974193 -6.015980315 0.528089912 0.87402969 1.123650378 0.501141507 0.072786495 1.181171739 0.588698585 0.05441734 0.158521441 9.64E-07 6.015980315 0.249620687 LSPS(ph)TSGPHSHDYLPQER ddPTM_A459_MK2206_30min_R1 1 LSPSTSGPHSHDYLPQER 18 0 Q5JR04;Q9HCE1 Q5JR04 MOV10 Putative helicase MOV-10 1 LS(0.075)PS(0.455)T(0.455)S(0.016)GPHSHDYLPQER 81.346 0.0069498 4417200 706.6 712.46 810.72 644.86 1136 992.72 1027 592.65 567.43 916.36 TRUE FALSE 646.4999595 666.0787245 755.6905852 694.5272289 1090.750714 1048.926949 958.4907039 587.4685235 626.4163791 1029.885595 0.627739588 0.64675021 0.733761681 0.674373185 1.059098913 1.018488805 0.930676872 0.570421148 0.608238801 1 10.00826837 -6.087620689 24.99999339 0.855174857 0.673289793 0.269094461 0.156022261 121.8618111 34766.48054 0.051802643 0.066876947 8.17E-07 6.087620689 -0.181885064 LSPS(ph)TSGPHSHDYLPQER ddPTM_A459_MK2206_30min_R2 1 LSPSTSGPHSHDYLPQER 18 0 Q5JR04;Q9HCE1 Q5JR04 MOV10 Putative helicase MOV-10 1 LS(0.078)PS(0.401)T(0.401)S(0.119)GPHSHDYLPQER 73.168 0.012161 5329700 9259.8 10063 7649.2 13457 12933 10041 14634 11586 8863.8 11614 TRUE FALSE 9968.737408 9563.286053 7904.22051 12357.52005 12425.18544 10423.11729 12712.53822 13100.32998 9634.757302 11235.03613 0.887290196 0.851202074 0.703533163 1.09990924 1.105931952 0.927733313 1.131508441 1.166024731 0.857563535 1 13.45571714 -5.771299318 24.99939172 1.049883856 0.817727828 0.520946852 0.099594885 148.8924563 377509.7442 0.02770451 0.04165722 1.69E-06 5.771299318 -0.232156028 LSPVIS(ph)PR ddPTM_A459_MK2206_30min_R2 1 LSPVISPR 8 0 Q08499-6;Q08499-7;Q08499-12 Q08499-6 PDE4D "cAMP-specific 3,5-cyclic phosphodiesterase 4D" 1 LSPVIS(1)PR 97.597 0.020141 17521000 48916 65224 50471 75631 47161 60280 50978 37333 46472 55318 TRUE FALSE 52661.04657 61985.071 52153.67795 69451.70537 45309.22217 62573.99764 44284.52736 42212.55128 50514.05056 53512.97819 0.984079906 1.15831847 0.974598681 1.297847881 0.846695955 1.169323774 0.827547426 0.788828294 0.943958873 1 15.7076012 -7.270977538 24.87759304 0.872485997 1.071366137 0.319338834 0.128955884 688.8176833 1796578.854 0.050058355 0.034254163 5.36E-08 7.270977538 0.19888014 LSPYPSS(ph)PMR ddPTM_A459_MK2206_30min_R2 1 LSPYPSSPMR 10 0 A0A0A0MRE6;O94967-2;O94967;O94967-3;O94967-4 A0A0A0MRE6 WDR47 WD repeat-containing protein 47 1 LS(0.001)PYPS(0.156)S(0.842)PMR 88.155 0.032646 5094500 43480 51623 44291 54523 42930 57180 56354 36580 44287 48460 TRUE FALSE 46808.86223 49059.47689 45767.63983 50068.29649 41244.35249 59356.02497 48954.65211 41361.1316 48139.00321 46878.75417 0.998509091 1.046518359 0.976298126 1.06803812 0.879809057 1.266160461 1.044282276 0.882300145 1.02688316 1 15.51664661 -7.644938653 20.52551054 0.965355588 1.041388669 0.09733892 0.097640236 5.479907151 945.974102 0.04543272 0.02623044 2.26E-08 7.644938653 0.07603308 LSQMQS(ph)PIPLTETR ddPTM_A459_MK2206_30min_R2 1 LSQMQSPIPLTETR 14 0 H3BSW6;Q2VPK5-3;Q2VPK5;Q2VPK5-5 H3BSW6 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 1 LS(0.001)QMQS(0.994)PIPLT(0.003)ET(0.003)R 149.31 0.00044272 7065100 14508 16395 21882 18796 17410 17528 19744 15219 15160 15780 TRUE FALSE 15618.74363 15580.84814 22611.53496 17260.30667 16726.39592 18195.04032 17151.58908 17208.17555 16478.5894 15265.09989 1.023166815 1.020684322 1.481256927 1.130703814 1.095727905 1.191937193 1.123581844 1.127288762 1.07949437 1 13.89794941 -8.504698527 0.873963489 1.000008196 1.162666219 0.134535527 0.121719424 1.353906896 2.302679876 0.120852882 0.042765778 3.13E-09 8.504698527 0.162658022 LSQNSVNLS(ph)PSSHANNLSVVTYSK ddPTM_A459_MK2206_30min_R2 1 LSQNSVNLSPSSHANNLSVVTYSK 24 0 Q5TH58;Q9H6K1-2;Q9H6K1 Q5TH58 C6orf106 Uncharacterized protein C6orf106 1 LS(0.001)QNS(0.066)VNLS(0.508)PS(0.182)S(0.243)HANNLSVVTYSK 91.603 2.77E-05 12950000 25916 51153 36832 55544 54224 69270 57582 40471 55096 43948 TRUE FALSE 27900.14889 48612.8164 38059.9605 51005.87752 52094.89331 71906.11839 50021.41423 45760.69866 59888.15049 42513.98036 0.656258216 1.143454835 0.895233995 1.199743639 1.225359114 1.691352298 1.176587415 1.07636825 1.408669571 1 15.37564972 -5.85149282 2.462323177 1.283089649 0.911089134 0.372849691 0.210332761 0.314853156 3.881858761 0.063291687 0.107980832 1.41E-06 5.85149282 -0.372000515 LSQNSVNLSPS(ph)SHANNLSVVTYSK ddPTM_A459_MK2206_30min_R1 1 LSQNSVNLSPSSHANNLSVVTYSK 24 0 Q5TH58;Q9H6K1-2;Q9H6K1 Q5TH58 C6orf106 Uncharacterized protein C6orf106 1 LSQNSVNLS(0.006)PS(0.965)S(0.028)HANNLSVVTYSK 113.79 1.29E-07 15734000 2977.9 1780.6 2108.9 1825.1 3464.9 3079.7 3068.4 3060.1 1735.2 1679.8 TRUE FALSE 2724.613967 1664.682616 1965.753744 1965.669518 3326.885696 3254.069953 2863.712635 3033.345868 1915.580249 1887.906306 1.443193425 0.881761246 1.041234799 1.041190186 1.762209113 1.723639538 1.516872223 1.606724793 1.014658537 1 10.88257145 -6.237798841 24.50429111 1.485977469 1.081795292 0.24577793 0.279383866 736.8296053 763750.5905 0.081250144 0.104826773 5.78E-07 6.237798841 -0.404182177 LSQNSVNLSPS(ph)SHANNLSVVTYSK ddPTM_A459_MK2206_30min_R2 1 LSQNSVNLSPSSHANNLSVVTYSK 24 0 Q5TH58;Q9H6K1-2;Q9H6K1 Q5TH58 C6orf106 Uncharacterized protein C6orf106 1 LSQNS(0.001)VNLS(0.107)PS(0.688)S(0.204)HANNLSVVTYSK 102.6 1.94E-06 11323000 45526 75736 57951 73373 84599 99202 89647 52335 81033 62224 TRUE FALSE 49011.50556 71975.06037 59883.05742 67378.19119 81277.21818 102977.2016 77876.24121 59175.36419 88081.10387 60193.63598 0.814230687 1.195725415 0.994840342 1.119357389 1.350262646 1.710765598 1.293762039 0.983083398 1.463295952 1 15.87732334 -6.098885481 3.743596387 1.31846353 1.024287789 0.278744836 0.215771018 0.332062643 8.476069177 0.066991489 0.090471057 7.96E-07 6.098885481 -0.294175741 LSQNSVNLSPSS(ph)HANNLSVVTYSK ddPTM_A459_MK2206_30min_R1 1 LSQNSVNLSPSSHANNLSVVTYSK 24 0 Q5TH58;Q9H6K1-2;Q9H6K1 Q5TH58 C6orf106 Uncharacterized protein C6orf106 1 LSQNSVNLS(0.048)PS(0.398)S(0.554)HANNLSVVTYSK 94.927 7.97E-06 14844000 3521.9 2294.4 2914.3 2336.1 4441.1 3292.2 4199.6 3274.3 2165 1870.6 TRUE FALSE 3222.343911 2145.034143 2716.485436 2516.026827 4264.201583 3478.601519 3919.452347 3245.67314 2390.059498 2102.34405 1.532738616 1.02030595 1.292122208 1.196772158 2.028308155 1.654629992 1.864324893 1.543835387 1.136854597 1 11.03778307 -4.450787652 21.67445958 1.451308792 4.506939516 0.000632527 0.336432018 3662.664089 1136577.739 0.08560924 17467.53858 3.54E-05 4.450787652 3.055630724 LSQSSQDS(ph)SPVR ddPTM_A459_MK2206_30min_R2 1 LSQSSQDSSPVR 12 0 O95251;O95251-4;O95251-2 O95251 KAT7 Histone acetyltransferase KAT7 1 LSQSS(0.001)QDS(0.656)S(0.343)PVR 141 0.0010279 12444000 41917 44954 46188 55995 50332 57794 51466 48506 49460 49814 TRUE FALSE 45126.19775 42721.64973 47727.88487 51420.02938 48355.71278 59993.39117 44708.45238 54845.90075 53761.9414 48188.57326 0.936450173 0.886551455 0.990439883 1.067058556 1.003468447 1.24497131 0.927781201 1.138151579 1.115657463 1 15.55640347 -5.582149485 2.079149513 1.077963548 0.908850218 0.371954859 0.082949277 0.323192243 2.781654317 0.023406446 0.055228304 2.62E-06 5.582149485 -0.169113331 LSQSSQDSS(ph)PVR ddPTM_A459_MK2206_30min_R1 5 LSQSSQDSSPVR 12 0 O95251;O95251-4;O95251-2 O95251 KAT7 Histone acetyltransferase KAT7 1 LSQSSQDS(0.044)S(0.956)PVR;LSQSSQDS(0.237)S(0.763)PVR;LSQSSQDS(0.003)S(0.997)PVR;LSQSSQDS(0.004)S(0.996)PVR;LSQSSQDS(0.004)S(0.996)PVR 214.58 1.50E-06 424086800 22669.5 23286.1 23082.3 20052.2 25202.9 23939.4 24262.3 22245.4 19819.5 17605 TRUE FALSE 20741.33998 21770.17066 21515.53779 21596.62392 24199.01512 25294.82814 22643.80624 22050.91081 21879.80795 19786.04031 1.048281498 1.100279304 1.087409984 1.091508133 1.223034763 1.278417902 1.144433443 1.114468103 1.105820447 1 14.2721953 -1.726032753 20.41480633 1.128346524 0.074581403 0 0.076909024 0 0 0.018668356 0 0.018791751 1.726032753 -1.053765121 LSQSSQDSS(ph)PVR ddPTM_A459_MK2206_30min_R2 4 LSQSSQDSSPVR 12 0 O95251;O95251-4;O95251-2 O95251 KAT7 Histone acetyltransferase KAT7 1 LSQSSQDS(0.04)S(0.96)PVR;LSQSSQDS(0.006)S(0.994)PVR;LSQSSQDS(0.034)S(0.966)PVR;LSQSS(0.001)QDS(0.065)S(0.934)PVR 150.9 0.00053682 635237000 352051 451203 379308 465500 440621 466000 500317 392709 394625 428497 TRUE FALSE 379004.2952 428796.9151 391953.9394 427467.1609 423320.0056 483733.9565 434624.7769 444037.4147 428948.7692 414515.178 0.914331526 1.034454075 0.945571984 1.031246101 1.021241267 1.16698732 1.048513541 1.071221124 1.034820417 1 18.6610654 -6.081173813 2.108528225 1.067182735 0.971810657 0.38338611 0.051032732 0.321739489 2.832514552 0.016063708 0.023696026 8.30E-07 6.081173813 -0.095372078 LSRLMSGSS(ph)RSLER ddPTM_A459_MK2206_30min_R1 4 LSRLMSGSSRSLER 14 2 F8WEJ8;F8WCI0;B5MC67;Q7Z6J6-2;Q7Z6J6 F8WEJ8 FRMD5 FERM domain-containing protein 5 1 LSRLMS(0.013)GS(0.013)S(0.975)RSLER;LSRLMSGSS(0.999)RS(0.001)LER;LSRLMSGSS(1)RSLER;LSRLMS(0.001)GS(0.001)S(0.998)RS(0.001)LER 199.68 0.0025836 97339000 5855.22 5922.1 5367.06 4311.15 5738.5 5714.6 5942.08 4897.54 5123.22 4897.19 TRUE FALSE 5357.202792 5536.570214 5002.758921 4643.19552 5509.923394 6038.155714 5545.694685 4854.721324 5655.797053 5503.890869 0.973348295 1.005937499 0.908949512 0.843620564 1.001096047 1.097070392 1.007595321 0.882052613 1.027599781 1 12.42623615 -6.442650697 24.99999947 1.001713461 0.934698046 0.22653342 0.062965303 183.9816513 57329.26861 0.021267021 0.024114529 3.61E-07 6.442650697 -0.067015415 LSS(ph)AEEASK ddPTM_A459_MK2206_30min_R2 1 LSSAEEASK 9 0 Q70Z53;Q70Z53-2;Q70Z53-4;Q70Z53-5;Q70Z53-3 Q70Z53 FRA10AC1 Protein FRA10AC1 1 LS(0.015)S(0.985)AEEASK 91.937 0.026557 3584100 45236 74723 55553 47803 38198 30164 40737 33083 31217 33547 TRUE FALSE 48699.30294 71012.36448 57405.10929 43897.34199 36698.15459 31311.91216 35388.18297 37407.06169 33932.19823 32452.36414 1.500639606 2.188203121 1.768903771 1.35267008 1.130831468 0.964857661 1.090465484 1.152676013 1.045600194 1 14.98603596 -5.896879361 2.306374909 1.068476387 1.875986327 0.810063507 0.163607138 0.113722803 1.229003075 0.048351402 0.080827704 1.27E-06 5.896879361 0.80750994 LSS(ph)AGPRSPYCK ddPTM_A459_MK2206_30min_R1 1 LSSAGPRSPYCK 12 1 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 LS(0.002)S(0.524)AGPRS(0.474)PYCK 128.21 0.011786 25822000 3891.9 3915.5 3779.7 3691.1 4326.7 3982 4146.7 3697.6 2834.7 2183.8 TRUE FALSE 3560.873468 3660.600238 3523.144495 3975.389162 4154.358377 4207.457399 3870.081209 3665.272273 3129.377209 2454.345631 1.45084434 1.491477073 1.435472026 1.619734854 1.692654174 1.71428887 1.576828121 1.49338065 1.275035256 1 11.26112271 -8.473076622 1.777560314 1.003031253 1.572618836 0.807260471 0.088276636 0.164625797 1.147629007 0.097259835 0.027885271 3.36E-09 8.473076622 0.569587583 LSS(ph)ATANALYSSNLR ddPTM_A459_MK2206_30min_R1 1 LSSATANALYSSNLR 15 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LS(0.143)S(0.856)AT(0.001)ANALYSSNLR 217.79 3.07E-09 21175000 2010.8 1886.4 2002 1551.3 1569.5 1325.4 1131.3 1285.4 1535.5 1360.1 TRUE FALSE 1839.770901 1763.595017 1866.109818 1670.781395 1506.983492 1400.443003 1055.833041 1274.161883 1695.12072 1528.599456 1.203566371 1.153732595 1.220797123 1.093014516 0.985858974 0.916160867 0.690719231 0.833548565 1.108937147 1 10.57799471 -6.282975901 1.829798636 0.887277339 1.188551321 0.583786959 0.104161686 0.245171026 1.617344859 0.038267145 0.049683864 5.21E-07 6.282975901 0.301273982 LSS(ph)ATANALYSSNLR ddPTM_A459_MK2206_30min_R2 2 LSSATANALYSSNLR 15 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LS(0.003)S(0.996)AT(0.001)ANALYSSNLR;LS(0.034)S(0.803)AT(0.163)ANALYSSNLR 220.72 1.98E-09 24488000 118458 130206 103219 111031 79509 77572 63445 55581 44096 55915 TRUE FALSE 127527.2356 123740.1594 106660.2699 101959.4121 76387.07716 80524.05682 55114.59529 62845.62754 47931.39037 54090.49813 2.357664284 2.287650579 1.971885518 1.884978243 1.412208795 1.488691352 1.018933033 1.161860765 0.886133277 1 15.72308756 -6.1214878 0.567551212 0.936160405 2.544699594 0.961984604 0.101034241 0.187473268 0.116812621 0.067843261 0.166023764 7.56E-07 6.1214878 1.60853919 up LSS(ph)DLTR ddPTM_A459_MK2206_30min_R1 1 LSSDLTR 7 0 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2;Q7Z6E9-4 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LS(0.253)S(0.717)DLT(0.031)R 88.177 0.039857 0 2292.5 2287.2 2278.7 1432.7 1681.9 2127.1 2415.7 1621.2 2230.5 2354.3 TRUE FALSE 2097.510837 2138.302864 2124.028193 1543.046802 1614.906362 2247.534564 2254.553061 1607.026019 2462.368457 2645.968458 0.792719516 0.808136188 0.802741312 0.583169009 0.61032714 0.849418502 0.852071027 0.607348895 0.930611417 1 11.36958015 -8.446475818 5.948367929 0.999196835 0.741282298 0.470986623 0.097520621 0.184326295 10.34524136 0.099377063 0.025767687 3.58E-09 8.446475818 -0.257914536 LSS(ph)EDEEEDEAEDDQSEASGKK ddPTM_A459_MK2206_30min_R2 2 LSSEDEEEDEAEDDQSEASGKK 22 1 Q8NEJ9-2;Q8NEJ9;G3V4G1 Q8NEJ9-2 NGDN Neuroguidin 1 LS(0.21)S(0.79)EDEEEDEAEDDQSEASGKK;LS(0.308)S(0.692)EDEEEDEAEDDQSEASGKK 126.1 1.55E-05 18576700 25510.5 32711.6 29720 31311 31770.1 24695.9 37238 22607.4 24412.1 38168 TRUE FALSE 27463.60349 31087.18951 30710.84997 28752.79114 30522.64624 25635.71978 32348.60587 25562.2648 26535.42033 36922.58129 0.743815913 0.841956018 0.831763352 0.77873188 0.826666099 0.694310064 0.876119836 0.692320632 0.718677281 1 15.1722158 -10.60713883 4.904168884 1.000004972 0.781027974 0.537100436 0.061707546 4.70E-06 8.78E-07 0.058888275 0.014282043 2.47E-11 10.60713883 -0.218976998 LSS(ph)ES(ph)S(ph)S(ph)QWALVVQFCR ddPTM_A459_MK2206_30min_R2 1 LSSESSSQWALVVQFCR 17 0 C4B7M2;Q96JI7-2;Q96JI7-3;Q96JI7 C4B7M2 SPG11 Spatacsin 4 LS(0.095)S(0.908)ES(0.997)S(1)S(1)QWALVVQFCR 79.659 0.013818 7808800 20953 20741 20055 22969 19588 18353 22550 17830 16359 21023 TRUE FALSE 22557.17779 19711.0321 20723.62369 21092.35923 18818.8767 19051.43628 19589.15791 20160.44222 17781.87625 20337.02123 1.109168227 0.969219232 1.019009788 1.037141034 0.925350693 0.936785976 0.963226506 0.991317361 0.87435992 1 14.31182076 -1.522878746 0.483556687 0.95058387 4.783895275 0.461969065 0.045421342 94.98117598 1.054735162 0.025863119 366.6779809 0.03 1.522878746 3.833311405 LSS(ph)FSCGQASATPFTDIK ddPTM_A459_MK2206_30min_R2 2 LSSFSCGQASATPFTDIK 18 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 LS(0.019)S(0.969)FS(0.013)CGQASATPFTDIK;LS(0.074)S(0.687)FS(0.239)CGQASATPFTDIK 201.04 1.45E-10 6499600 21572 26932 22057 19002.9 21633.3 28024.9 41696 35318 35293 47444 TRUE FALSE 23223.56891 25594.59604 22792.36937 17450.30228 20783.86794 29091.40721 36221.26511 39934.18386 38362.72134 45895.90617 0.506005238 0.55766621 0.496610074 0.380214789 0.45284797 0.633856255 0.789204706 0.870103397 0.835863687 1 15.48607785 -7.215915464 1.731859064 0.892497075 0.477919212 0.908046369 0.059848018 0.112497325 0.660460866 0.0338816 0.021660267 6.08E-08 7.215915464 -0.414577863 LSS(ph)GFDDIDLPSAVK ddPTM_A459_MK2206_30min_R2 6 LSSGFDDIDLPSAVK 15 0 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 LS(0.299)S(0.701)GFDDIDLPSAVK;LS(0.426)S(0.574)GFDDIDLPSAVK;LS(0.317)S(0.683)GFDDIDLPSAVK;LS(0.464)S(0.536)GFDDIDLPSAVK;LS(0.115)S(0.885)GFDDIDLPSAVK;LS(0.296)S(0.704)GFDDIDLPSAVK 178.03 2.56E-09 18871000 76434.2 83295.8 95148.3 85829.56 77700.6 72011.2 92119.6 66522.07 55721 83509.4 TRUE FALSE 82286.06112 79159.4517 98320.49683 78817.01039 74649.68403 74751.63668 80024.18586 75216.73295 60567.51186 80784.49512 1.018587304 0.979884216 1.217071378 0.975645268 0.924059548 0.92532158 0.990588426 0.931078827 0.749741789 1 16.3017908 -5.990127105 24.96819963 0.923139267 1.068269152 0.386325459 0.085448568 221.6777591 560609.2396 0.024142552 0.035763409 1.02E-06 5.990127105 0.145129885 LSS(ph)GLVSPAPSFYSK ddPTM_A459_MK2206_30min_R2 1 LSSGLVSPAPSFYSK 15 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 LS(0.008)S(0.982)GLVS(0.009)PAPSFYSK 215.48 9.81E-08 15504000 116010 149740 130100 154350 127320 126200 129220 96918 106440 103430 TRUE FALSE 124891.8148 142304.1293 134437.4691 141739.1113 122320.7771 131002.6294 112253.2588 109585.5154 115697.9588 100055.0876 1.248230528 1.422257806 1.343634515 1.416610736 1.222534306 1.30930503 1.121914552 1.095251806 1.156342587 1 16.610435 -7.233466529 0.886807313 1.058730989 1.361113723 0.74845887 0.067178412 0.285895467 0.440657314 0.049472451 0.029534316 5.84E-08 7.233466529 0.302382734 LSS(ph)GPEQITLEASSTEGHPGAPSPQHTDQTEAFQK ddPTM_A459_MK2206_30min_R1 1 LSSGPEQITLEASSTEGHPGAPSPQHTDQTEAFQK 35 0 Q6P996-4;H3BND4;Q6P996-3;Q6P996-5;Q6P996 Q6P996-4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 LS(0.156)S(0.837)GPEQIT(0.007)LEASSTEGHPGAPSPQHTDQTEAFQK 109.14 9.48E-15 6923200 334.6 227.43 225.31 145 418.39 329.84 441.35 316.13 137.14 229.47 TRUE FALSE 306.1405129 212.6242657 210.0165849 156.1679251 401.7246403 348.5152558 411.9083468 313.3661087 151.3961938 257.898476 1.187058247 0.824449485 0.814338216 0.605540318 1.557685205 1.351366092 1.597172473 1.215075458 0.587037954 1 8.010659438 -6.256529864 24.99973691 1.254431278 0.85235333 0.250895571 0.300947966 571.6591204 2910941.448 0.093368594 0.116680748 5.54E-07 6.256529864 -0.402077948 LSS(ph)LSSQTEPTSAGDQYDCSR ddPTM_A459_MK2206_30min_R2 1 LSSLSSQTEPTSAGDQYDCSR 21 0 Q9BY89;A0A1B0GVJ7;Q9BY89-2 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 LS(0.101)S(0.673)LS(0.224)S(0.002)QTEPTSAGDQYDCSR 335.42 1.64E-281 0 6029.8 6156 3203.4 5078.5 3345.5 4971.1 2842.7 944.71 1039.5 2633.1 TRUE FALSE 6491.446124 5850.301992 3310.199757 4663.570305 3214.13886 5160.278694 2469.450075 1068.186841 1129.913831 2547.182163 2.548481306 2.296774089 1.299553603 1.830874279 1.261840989 2.025877367 0.969483106 0.419360208 0.443593649 1 11.31468642 -5.694735483 0.361130567 0.55411724 3.075212948 0.665216504 0.407107551 2.140443608 0.362344747 0.443938003 2.223857181 2.02E-06 5.694735483 2.521095708 LSS(ph)PGLPQQSFTPQCSLIR ddPTM_A459_MK2206_30min_R2 1 LSSPGLPQQSFTPQCSLIR 19 0 Q13495-4;Q13495;Q13495-3 Q13495-4 MAMLD1 Mastermind-like domain-containing protein 1 1 LS(0.191)S(0.779)PGLPQQS(0.023)FT(0.007)PQCSLIR 79.347 0.028082 0 4067.3 3687.7 6651.7 5027.3 5401.4 5648.1 3946 1833.2 5256.4 4984.2 TRUE FALSE 4378.695615 3504.57418 6873.464358 4616.553508 5189.313896 5863.042403 3427.88546 2072.805534 5713.592171 4821.565962 0.908148027 0.726853932 1.4255668 0.95748011 1.076271472 1.216003773 0.710948577 0.429902971 1.185007571 1 12.23528607 -7.274094884 24.73582932 0.783956686 1.050779306 0.143581038 0.25309909 1134.320519 2217078.012 0.104510958 0.070995857 5.32E-08 7.274094884 0.26682262 LSS(ph)PGPSR ddPTM_A459_MK2206_30min_R1 2 LSSPGPSR 8 0 Q86VQ6;H0YBI6;H0YBQ0 Q86VQ6 TXNRD3 Thioredoxin reductase 3 1 LS(0.023)S(0.977)PGPSR;LS(0.02)S(0.979)PGPS(0.001)R 136.52 0.0025896 39431000 12591.9 13677.4 13095.5 11442.4 13082.6 11265 12896.1 11267.4 5670.4 9433.8 TRUE FALSE 11520.89278 12786.99877 12206.61395 12323.69563 12561.49234 11902.81456 12035.8247 11168.89031 6259.858372 10602.53037 1.086617287 1.206032742 1.151292524 1.16233533 1.184763628 1.122639045 1.135184176 1.053417432 0.590411737 1 13.37212099 -8.06711699 5.910979764 0.796393037 1.149351074 0.676136869 0.096792179 0.115383738 7.596001515 0.060503969 0.02260247 8.57E-09 8.06711699 0.352958038 LSS(ph)PGPSR ddPTM_A459_MK2206_30min_R2 1 LSSPGPSR 8 0 Q86VQ6;H0YBI6;H0YBQ0 Q86VQ6 TXNRD3 Thioredoxin reductase 3 1 LS(0.03)S(0.97)PGPSR 96.665 0.020894 6432300 70101 77285 68493 83303 83694 73891 76530 58422 73457 68986 TRUE FALSE 75467.98646 73447.13928 70776.52243 76496.87843 80407.75303 76702.97378 66481.51907 66057.95599 79846.15708 66734.99247 1.130860792 1.10057912 1.060560881 1.146278371 1.204881428 1.149366636 0.996201792 0.98985485 1.196466114 1 16.02615582 -10.52150863 4.917608492 0.99999875 1.105084501 0.173786006 0.070546618 9510381.627 20351333.15 75.99803981 0.018223131 3.01E-11 10.52150863 0.105085751 LSS(ph)PIDMTSK ddPTM_A459_MK2206_30min_R2 1 LSSPIDMTSK 10 0 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 LS(0.026)S(0.974)PIDMTSK 124.12 0.0039394 4242900 76052 76911 62126 65507 45927 43980 47857 38486 29828 44537 TRUE FALSE 81874.59959 73091.71158 64197.24983 60154.86855 44123.67522 45653.68972 41573.31841 43516.25234 32422.38552 43083.76134 1.900358675 1.696502564 1.49005676 1.396230661 1.024137026 1.059649583 0.964941712 1.010038376 0.752543058 1 15.39485659 -5.579927436 0.656219889 0.904582931 2.065945949 0.947594186 0.080389765 0.28312121 0.17926342 0.042041255 0.21488497 2.63E-06 5.579927436 1.161363018 LSS(ph)PISK ddPTM_A459_MK2206_30min_R2 1 LSSPISK 7 0 Q99728-3;Q99728-2;Q99728;A0A494C142 Q99728-3 BARD1 BRCA1-associated RING domain protein 1 1 LS(0.138)S(0.853)PIS(0.009)K 88.37 0.032367 3854100 62335 64682 63147 66307 72036 56163 76060 62070 56179 70816 TRUE FALSE 67107.41553 61469.98594 65252.28946 60889.50599 69207.50469 58300.32232 66073.23064 70182.76212 61065.34787 68505.27972 0.979594796 0.897302897 0.952514751 0.88882939 1.010250669 0.851034001 0.96449837 1.024486907 0.891396227 1 16.06392756 -9.74699057 0.313593374 1.017403907 0.930427342 0.088828469 0.054298535 16.05112452 2.007020148 0.397061498 0.057344651 1.79E-10 9.74699057 -0.086976565 LSS(ph)PVLHR ddPTM_A459_MK2206_30min_R1 5 LSSPVLHR 8 0 Q16643-3;Q16643;Q16643-2;D6R9W4;D6RCR4 Q16643-3 DBN1 Drebrin 1 LS(0.353)S(0.647)PVLHR;LS(0.346)S(0.654)PVLHR;LS(0.073)S(0.927)PVLHR;LS(0.038)S(0.962)PVLHR;LS(0.066)S(0.934)PVLHR 174.86 0.00018329 499754000 29788.3 28348 28064.7 24344.4 30241.8 27265.8 28806.3 26814.5 23869.5 22892.6 TRUE FALSE 27254.64866 26502.54005 26159.74636 26219.40991 29037.20507 28809.56603 26884.68429 26580.06365 26350.81994 25728.70812 1.059308868 1.030076595 1.016753202 1.01907215 1.128591647 1.11974398 1.044929429 1.033089712 1.024179676 1 14.6510914 -8.070405906 1.833828092 1.007962009 1.060245731 0.231122536 0.036159971 0.645746807 3.87708505 0.036776596 0.011737659 8.50E-09 8.070405906 0.052283722 LSS(ph)PVLHR ddPTM_A459_MK2206_30min_R2 1 LSSPVLHR 8 0 Q16643-3;Q16643;Q16643-2;D6R9W4;D6RCR4 Q16643-3 DBN1 Drebrin 1 LS(0.144)S(0.856)PVLHR 93.598 0.015769 12361000 27287 34695 32077 35463 30571 28442 32000 24463 25896 29092 TRUE FALSE 29376.1137 32972.09675 33146.43117 32565.55946 29370.62893 29524.38024 27798.36156 27660.39809 28148.38727 28142.73042 1.043825999 1.171602622 1.177797274 1.157157069 1.043631108 1.049094377 0.987763488 0.982861211 1.000201006 1 14.78047469 -6.563132163 1.766940198 0.995914217 1.142913959 0.723174166 0.038928964 0.184251729 1.170924522 0.015442313 0.016350264 2.73E-07 6.563132163 0.146999742 LSS(ph)SKENLDASK ddPTM_A459_MK2206_30min_R2 2 LSSSKENLDASK 12 1 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 LS(0.014)S(0.931)S(0.055)KENLDASK;LS(0.004)S(0.888)S(0.108)KENLDASK 183.06 0.00049498 32069000 161069 131409 134365 127671 118777 75057 180593 129690 103356 172747 TRUE FALSE 173400.5665 124883.4201 138844.662 117239.8709 114113.2182 77913.34673 156880.9222 146640.9283 112345.7181 167110.2795 1.037641532 0.747311419 0.8308565 0.701571868 0.682861751 0.466239102 0.938786786 0.877509922 0.672284903 1 17.35044096 -10.04247734 13.36181392 0.999997248 0.76794943 0.167351329 0.151701245 0 0 0.149574132 0.036277056 9.07E-11 10.04247734 -0.232047818 LSS(ph)SLGR ddPTM_A459_MK2206_30min_R1 2 LSSSLGR 7 0 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 LS(0.086)S(0.614)S(0.3)LGR;LS(0.089)S(0.599)S(0.312)LGR 110.12 0.015552 110643000 15421.3 14048 13687.9 11976.2 17007.5 13842.7 16274.3 13758 13115.7 11109 TRUE FALSE 14109.63745 13133.47265 12758.80348 12898.609 16330.05526 14626.46171 15188.67114 13637.71526 14479.12395 12485.26679 1.130103 1.051917662 1.021908759 1.033106398 1.307946041 1.171497731 1.21652756 1.092304673 1.159696801 1 13.60793903 LSS(ph)SLGR ddPTM_A459_MK2206_30min_R2 4 LSSSLGR 7 0 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 LS(0.069)S(0.465)S(0.465)LGR;LS(0.089)S(0.598)S(0.313)LGR;LS(0.253)S(0.48)S(0.268)LGR;LS(0.253)S(0.48)S(0.268)LGR 98.629 0.021733 179668000 312224 385149 332942 421216 370003 369029 365149 305044 316452 344452 TRUE FALSE 336128.1095 366023.0607 344042.1201 386801.3054 355474.8231 383072.6572 317204.4977 344914.2982 343976.4229 333212.5594 1.00874982 1.098467181 1.032500458 1.160824508 1.066810998 1.149634509 0.951958408 1.03511794 1.032303295 1 18.34608325 -7.264535163 24.99995107 1.007771408 1.086798434 0.402261046 0.04850658 293.1159911 2367038.835 0.019122252 0.013540878 5.44E-08 7.264535163 0.079027026 LSS(ph)SPGLFGAFSVR ddPTM_A459_MK2206_30min_R1 2 LSSSPGLFGAFSVR 14 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 LS(0.004)S(0.655)S(0.341)PGLFGAFSVR;LSS(0.5)S(0.5)PGLFGAFSVR 276.32 1.39E-45 48662000 6565.5 6423.1 6235.6 5439 6807.7 5801.8 6003.2 6015.8 4873.1 5083 TRUE FALSE 6007.069748 6004.955023 5812.344845 5857.912722 6536.534893 6130.292902 5602.737481 5963.204495 5379.676184 5712.720415 1.051525248 1.051155069 1.017439052 1.025415616 1.144207036 1.073095208 0.980747713 1.043846725 0.94170129 1 12.47996221 -7.26053632 24.99438624 0.995227824 1.06030584 0.416591576 0.039849767 92.9368927 2572325.938 0.016636511 0.012111296 5.49E-08 7.26053632 0.065078016 LSS(ph)SPGLFGAFSVR ddPTM_A459_MK2206_30min_R2 2 LSSSPGLFGAFSVR 14 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 LS(0.006)S(0.922)S(0.072)PGLFGAFSVR;LS(0.001)S(0.941)S(0.058)PGLFGAFSVR 310.9 5.61E-94 26465000 99600 119237 108453 135817 110279 123307 110674 91319 95226 111911 TRUE FALSE 107225.4526 113315.864 112068.7689 124720.3166 105948.8924 127999.5343 96142.37086 103254.7068 103508.5854 108259.3532 0.99044978 1.04670738 1.035187866 1.152051189 0.978658095 1.182341576 0.888074499 0.953771695 0.95611679 1 16.72413215 -7.282279558 24.9821478 0.94563839 1.06221784 0.428396853 0.06484487 766.2861479 918580.5636 0.025736882 0.017371511 5.22E-08 7.282279558 0.11657945 LSS(ph)STVAISYSPDR ddPTM_A459_MK2206_30min_R2 1 LSSSTVAISYSPDR 14 0 Q96T17-5;Q96T17;Q96T17-2 Q96T17-5 MAP7D2 MAP7 domain-containing protein 2 1 LS(0.003)S(0.592)S(0.403)T(0.002)VAISYSPDR 126.09 0.0013265 2634400 13305 11931 10333 10917 11709 10823 11282 7667.7 11401 10758 TRUE FALSE 14323.64103 11338.52389 10677.49706 10025.04618 11249.24583 11234.87685 9800.659848 8669.894717 12392.63837 10406.96734 1.376351108 1.089512777 1.025995058 0.963301397 1.080934095 1.079553388 0.941740233 0.833085608 1.190802081 1 13.3452621 -4.678838158 2.085640708 1.008357885 1.552152676 0.590573305 0.090133779 0.689468687 2.655012539 0.023843581 0.784561572 2.09E-05 4.678838158 0.543794791 LSS(ph)TDDGYIDLQFK ddPTM_A459_MK2206_30min_R1 2 LSSTDDGYIDLQFK 14 0 Q96A57-2;Q5JWB9;A0A087WTT2;Q96A57 Q96A57-2 TMEM230 Transmembrane protein 230 1 LS(0.066)S(0.931)T(0.003)DDGYIDLQFK;LSS(0.5)T(0.5)DDGYIDLQFK 312.25 4.41E-94 36143000 6820.9 6072.9 5891.4 5134.4 5604.2 3454.5 4646.6 4989.8 4611.7 4292.5 TRUE FALSE 6240.746637 5677.553106 5491.508182 5529.852378 5380.972847 3650.090805 4336.633792 4946.174705 5091.102718 4824.287307 1.293610069 1.176868778 1.138304548 1.146252706 1.115392286 0.756607261 0.898916983 1.025265369 1.0553067 1 12.23610011 -6.54088716 24.33521183 0.944692724 1.177620436 0.637722159 0.086741969 123.9740449 167527.6919 0.030701927 0.030708273 2.88E-07 6.54088716 0.232927712 LSS(ph)TDDGYIDLQFK ddPTM_A459_MK2206_30min_R2 2 LSSTDDGYIDLQFK 14 0 Q96A57-2;Q5JWB9;A0A087WTT2;Q96A57 Q96A57-2 TMEM230 Transmembrane protein 230 1 LS(0.106)S(0.746)T(0.148)DDGYIDLQFK;LS(0.004)S(0.953)T(0.043)DDGYIDLQFK 217.2 1.22E-08 4223700 36964 27795 30104 31218 31023 23643.5 33625 22314.3 27271 38728 TRUE FALSE 39793.99226 26414.74072 31107.65233 28667.38954 29804.88114 24543.26996 29209.99711 25230.85563 29642.98229 37464.30853 1.062184085 0.705064146 0.830327679 0.76519201 0.795554017 0.655110715 0.77967533 0.673463801 0.791232601 1 15.1932292 -4.754302348 24.98541819 0.76519326 1.062184604 0.456693247 0.092376538 202.6416731 709349.4886 0.021052752 0.207688849 1.76E-05 4.754302348 0.296991344 LSS(ph)TPPLSALGR ddPTM_A459_MK2206_30min_R2 1 LSSTPPLSALGR 12 0 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 LS(0.019)S(0.878)T(0.1)PPLS(0.004)ALGR 125.36 0.002888 9578600 83388 89458 83662 105410 98589 94748 106980 73159 78365 87354 TRUE FALSE 89772.24939 85015.6458 86451.24932 96797.66581 94717.90049 98353.70153 92933.39749 82721.13249 85181.04605 84503.64613 1.062347644 1.006058906 1.023047564 1.14548508 1.120873534 1.163898909 1.099756067 0.978906074 1.008016221 1 16.36672597 -7.759292837 24.96527404 0.995095847 1.089375665 0.449283655 0.047250993 58.69038353 682624.0649 0.027288381 0.014753132 1.74E-08 7.759292837 0.094279818 LSS(ph)YTECYK ddPTM_A459_MK2206_30min_R1 1 LSSYTECYK 9 0 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 LS(0.092)S(0.903)YT(0.006)ECYK 87.298 0.032705 4892200 5322.5 5014.6 4613.6 3863.8 3549.2 2340.5 3113.4 3242.4 3202.3 2490.5 TRUE FALSE 4869.793425 4688.148629 4300.441686 4161.390545 3407.827848 2473.017087 2905.710767 3214.052039 3535.190545 2799.041942 1.739807236 1.67491189 1.53639773 1.48671961 1.217497958 0.883522698 1.038109048 1.148268624 1.263000204 1 11.45071739 -6.140095674 1.736972483 1.071464578 1.668343973 0.864127908 0.103470776 0.135481599 0.810793692 0.038961558 0.057188205 7.24E-07 6.140095674 0.596879395 LSS(ph)YTECYK ddPTM_A459_MK2206_30min_R2 1 LSSYTECYK 9 0 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 LS(0.089)S(0.911)YTECYK 88.681 0.030873 5821900 29628 31449 26511 35412 27805 26111 24022 20271 21138 21974 TRUE FALSE 31896.34246 29887.28839 27394.86351 32518.72632 26713.23599 27104.6724 20867.88254 22920.4893 22976.54503 21256.99018 1.500510759 1.405998128 1.288746115 1.52978978 1.256680074 1.275094554 0.981695074 1.078256569 1.080893618 1 14.37564972 -6.911394326 1.579199388 1.038302757 1.416055452 0.817953127 0.080851571 0.15558942 0.796273045 0.036932555 0.029704566 1.23E-07 6.911394326 0.377752695 LSSAGPRS(ph)PYCK ddPTM_A459_MK2206_30min_R1 1 LSSAGPRSPYCK 12 1 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 LS(0.001)S(0.004)AGPRS(0.989)PY(0.007)CK 120.29 0.019314 22478000 5628.7 5545.9 5898.6 5545.4 5643.7 5454.2 5004.8 5095 3879.3 2863.9 TRUE FALSE 5149.949508 5184.860902 5498.219466 5972.507669 5418.899478 5763.012091 4670.938924 5050.454952 4282.567117 3218.701553 1.600008395 1.610854817 1.7082104 1.855564292 1.683566926 1.790477307 1.451187333 1.569097 1.330526315 1 11.6522631 -8.472963369 0.83630076 1.001134802 1.705338619 0.841820744 0.09412397 0.2440442 0.382461967 0.093944528 0.034127515 3.37E-09 8.472963369 0.704203817 LSSAGPRS(ph)PYCK ddPTM_A459_MK2206_30min_R2 1 LSSAGPRSPYCK 12 1 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 LS(0.011)S(0.011)AGPRS(0.96)PY(0.018)CK 70.373 0.034896 21458000 36554 61674 52779 67247 59968 57904 54177 52688 59526 53445 TRUE FALSE 39352.60235 58611.35884 54538.62552 61752.70499 57613.355 60107.5773 47063.49482 59574.5025 64703.46388 51701.09403 0.761156085 1.133658 1.054883394 1.194417761 1.114354659 1.162597783 0.910299786 1.152287077 1.251491194 1 15.65790719 -4.759047444 24.98657098 1.109712811 0.761155627 0.553914078 0.093428626 48.01626375 501476.6167 0.022947914 0.149880524 1.74E-05 4.759047444 -0.348557183 LSSERPS(ph)SDGEGVVENGITTCNGK ddPTM_A459_MK2206_30min_R1 1 LSSERPSSDGEGVVENGITTCNGK 24 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 LS(0.006)S(0.015)ERPS(0.709)S(0.27)DGEGVVENGITTCNGK 146.06 1.11E-09 52189000 6298.7 5635.8 6033.9 4941.3 6139.6 5590.4 5929 4991.4 5554.8 4643.1 TRUE FALSE 5762.962489 5268.908396 5624.335679 5321.879782 5895.046731 5906.923617 5533.487228 4947.760716 6132.241338 5218.322282 1.104370749 1.009693942 1.077805351 1.01984498 1.129682379 1.131958376 1.060395838 0.948151618 1.175136568 1 12.34937033 -11.05000903 3.719344493 0.998796144 1.069077997 0.102363413 0.063910816 0.000632283 8.04E-05 0.061327384 0.014620751 8.91E-12 11.05000903 0.070281852 LSSERPSS(ph)DGEGVVENGITTCNGK ddPTM_A459_MK2206_30min_R1 2 LSSERPSSDGEGVVENGITTCNGK 24 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 LSS(0.006)ERPS(0.162)S(0.832)DGEGVVENGITTCNGK;LS(0.009)S(0.035)ERPS(0.187)S(0.769)DGEGVVENGITTCNGK 118.46 8.27E-08 81473000 5702.2 5571.5 5623.3 5021.5 5627.1 5125.5 5903 5176.4 4943.1 4635.8 TRUE FALSE 5217.197947 5208.794337 5241.606063 5408.2568 5402.960691 5415.701381 5509.221641 5131.143281 5456.952934 5210.117903 1.001358903 0.999745963 1.006043656 1.038029638 1.037013133 1.039458508 1.057408248 0.984842066 1.047376093 1 12.34710031 -5.671980124 5.536540508 1.030418263 1.001262762 0.263388812 0.020522725 0.264235618 12.76694555 0.00548877 0.009599287 2.13E-06 5.671980124 -0.029155501 LSSERPSS(ph)DGEGVVENGITTCNGK ddPTM_A459_MK2206_30min_R2 4 LSSERPSSDGEGVVENGITTCNGK 24 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 LS(0.297)S(0.246)ERPS(0.14)S(0.317)DGEGVVENGITTCNGK;LS(0.003)S(0.043)ERPS(0.16)S(0.794)DGEGVVENGITTCNGK;LS(0.008)S(0.031)ERPS(0.178)S(0.783)DGEGVVENGITTCNGK;LS(0.001)S(0.013)ERPS(0.157)S(0.83)DGEGVVENGITTCNGK 114.78 8.32E-08 275374000 403542 420848 409181 441661 472899 377845 477133 371502 403650 468485 TRUE FALSE 434437.4858 399949.3003 422822.8903 405575.8835 454330.6091 392224.1562 414484.864 420058.587 438758.7474 453198.3728 0.958603366 0.882503831 0.932975305 0.894919108 1.002498324 0.865457998 0.914577123 0.926875762 0.9681384 1 18.78978316 -8.42081751 2.372973696 0.999330574 0.920403618 0.328402964 0.036760052 0.307305509 3.573996364 0.033346952 0.009206523 3.79E-09 8.42081751 -0.078926957 LSSESHHGGS(ph)PIHWVLPAGMSAK ddPTM_A459_MK2206_30min_R1 1 LSSESHHGGSPIHWVLPAGMSAK 23 0 J3QR07;Q96MU7;Q96MU7-2 J3QR07 YTHDC1 YTH domain-containing protein 1 1 LS(0.044)S(0.039)ES(0.166)HHGGS(0.751)PIHWVLPAGMSAK 52.451 0.025946 5871200 2202 1371.3 1603.6 1151.6 3796.3 3833 3104.4 2090 1256.4 929.4 TRUE FALSE 2014.708337 1282.028121 1494.7521 1240.296432 3645.085332 4050.021148 2897.31114 2071.72735 1387.007276 1044.541089 1.928797592 1.227360163 1.431013214 1.187407987 3.489652415 3.877321047 2.773764644 1.983385214 1.327862821 1 10.02865353 -6.235793258 24.77390866 2.549521585 1.427293472 0.225588254 0.852068045 970.8307706 937813.089 0.267612162 0.345351466 5.81E-07 6.235793258 -1.122228113 LSSESHHGGS(ph)PIHWVLPAGMSAK ddPTM_A459_MK2206_30min_R2 3 LSSESHHGGSPIHWVLPAGMSAK 23 0 J3QR07;Q96MU7;Q96MU7-2 J3QR07 YTHDC1 YTH domain-containing protein 1 1 LS(0.162)S(0.162)ES(0.145)HHGGS(0.532)PIHWVLPAGMSAK;LS(0.019)S(0.016)ES(0.014)HHGGS(0.95)PIHWVLPAGMSAK;LS(0.021)S(0.092)ES(0.092)HHGGS(0.796)PIHWVLPAGMSAK 93.166 5.75E-05 19280000 29563.1 102799.2 70066.7 186544 191700 281392 169960 112807.4 191108 141004 TRUE FALSE 31826.47367 97694.34121 72402.68881 171302.7585 184172.8948 292100.5697 147644.0478 127551.7145 207730.2284 136403.051 0.233326699 0.716218153 0.530799628 1.255857235 1.350210962 2.141451878 1.082410157 0.935108955 1.522914824 1 17.05751639 -5.785139794 3.984971322 1.358778392 0.501492592 0.560953175 0.33818275 0.164126777 5.693527698 0.100439453 0.164687999 1.64E-06 5.785139794 -0.8572858 LSSGDPSTSPSLSQTT(ph)PSKDTDDQSR ddPTM_A459_MK2206_30min_R2 2 LSSGDPSTSPSLSQTTPSKDTDDQSR 26 1 Q99504-2;Q99504-4;Q99504-5;Q99504-3;Q99504 Q99504-2 EYA3 Eyes absent homolog 3 1 LSSGDPS(0.002)T(0.007)S(0.072)PS(0.072)LS(0.24)QT(0.24)T(0.327)PS(0.028)KDT(0.012)DDQSR;LSSGDPS(0.001)T(0.002)S(0.024)PS(0.024)LS(0.021)QT(0.232)T(0.654)PS(0.041)KDT(0.002)DDQSR 94.802 6.16E-06 21879000 55539 53903 43472 49734 58810 43295 61085 43006 53094 63428 TRUE FALSE 59791.10854 51226.2554 44921.33478 45670.57311 56500.8239 44942.62156 53064.46612 48627.03186 57712.02015 61358.34955 0.974457575 0.834870165 0.732114457 0.744325319 0.920833502 0.732461383 0.864828772 0.792508798 0.940573216 1 15.90497206 -8.425402517 3.64808939 0.998632105 0.820758775 0.377006881 0.076406189 0.223451217 5.292625544 0.072843085 0.01925865 3.75E-09 8.425402517 -0.17787333 LSSGLVS(ph)PAPSFYSK ddPTM_A459_MK2206_30min_R1 2 LSSGLVSPAPSFYSK 15 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 LSS(0.026)GLVS(0.974)PAPSFYSK;LSS(0.005)GLVS(0.968)PAPS(0.025)FY(0.002)SK 162.64 0.00011004 40374000 10358.5 10976.3 11612.5 8641.1 11468.9 9555.8 11356.5 9839.8 9593.3 9260 TRUE FALSE 9477.45518 10261.74087 10824.27585 9306.639019 11012.06943 10096.84114 10598.92861 9753.771666 10590.55786 10407.19871 0.910663421 0.986023344 1.040075832 0.894250151 1.058120416 0.970178568 1.018422815 0.937213936 1.017618493 1 13.34529417 -4.764704721 6.118082286 0.990314156 0.908051851 0.216955135 0.045998789 0.189366202 28.72119822 0.010578251 0.06528289 1.72E-05 4.764704721 -0.082262305 LSSGLVS(ph)PAPSFYSK ddPTM_A459_MK2206_30min_R2 1 LSSGLVSPAPSFYSK 15 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 LS(0.002)S(0.205)GLVS(0.756)PAPS(0.036)FYS(0.001)K 95.236 0.01095 16200000 66149 73862 64084 79262 56027 69524 66274 50415 63428 61012 TRUE FALSE 71213.4183 70194.12049 66220.52858 72786.04105 53827.09847 72169.78454 57572.14419 57004.4136 68944.85279 59021.18344 1.20657388 1.189303846 1.121979003 1.233218936 0.911996259 1.222777659 0.975448828 0.965829729 1.168137417 1 15.84894523 -6.237311992 24.86637382 1.044831274 1.183179279 0.379941704 0.091876957 825.1732106 850446.8866 0.026037804 0.033596901 5.79E-07 6.237311992 0.138348005 LSSLRAS(ph)TSK ddPTM_A459_MK2206_30min_R1 1 LSSLRASTSK 10 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 1 LSSLRAS(0.5)T(0.5)S(0.001)K 126.12 0.016665 39997000 4716.8 3993.6 4373 4207.3 4095.4 2557 2758.9 3138.5 1455.5 938.16 TRUE FALSE 4315.611391 3733.615914 4076.172944 4531.346975 3932.271546 2701.77513 2574.858815 3111.060425 1606.804434 1054.386344 4.09300767 3.541032124 3.865919707 4.297615388 3.729440892 2.562414761 2.442044921 2.950588695 1.523923791 1 10.04218787 -7.72496026 0.513329716 0.994663803 4.073632938 0.859832002 0.395103538 0.33070292 0.198638921 0.428831144 0.289468656 1.88E-08 7.72496026 3.078969135 LSSLS(ph)LSPANHENQPSEGER ddPTM_A459_MK2206_30min_R2 2 LSSLSLSPANHENQPSEGER 20 0 Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3;G8JLP4 Q9Y4F3-3 KIAA0430 Meiosis arrest female protein 1 1 LS(0.049)S(0.194)LS(0.673)LS(0.082)PANHENQPS(0.001)EGER;LS(0.148)S(0.148)LS(0.471)LS(0.232)PANHENQPSEGER 67.396 0.0096218 7853500 9923.1 17899.8 17770 21848 22540 25487 23263.5 17191.7 23939 20473.2 TRUE FALSE 10682.82017 17010.92196 18362.44293 20062.94851 21654.96635 26456.92564 20208.97451 19438.71422 26021.17095 19805.16116 0.539395771 0.858913584 0.927154431 1.01301617 1.093400158 1.335860154 1.020389299 0.981497402 1.313858077 1 14.27358882 -4.512073768 0.77951616 1.126132575 1.71E-17 0.69476145 0.118189115 2.17346767 0.758044044 0.045601752 2.345942926 3.08E-05 4.512073768 -1.126132575 LSSLSLS(ph)PANHENQPSEGER ddPTM_A459_MK2206_30min_R1 1 LSSLSLSPANHENQPSEGER 20 0 Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3;G8JLP4 Q9Y4F3-3 KIAA0430 Meiosis arrest female protein 1 1 LS(0.002)S(0.007)LS(0.12)LS(0.872)PANHENQPSEGER 82.831 0.0020842 4811800 1656.7 1260.3 1119.5 910.47 1413.2 1501.2 1391.6 1558.1 1101.7 1021.3 TRUE FALSE 1515.788965 1178.254241 1043.511459 980.5945572 1356.909251 1586.196647 1298.768903 1544.477696 1216.225657 1147.826354 1.320573412 1.026509137 0.90911962 0.854305665 1.182155512 1.381913423 1.131502947 1.345567376 1.059590288 1 10.16468869 -6.490880664 23.54982758 1.210936726 1.018975745 0.177633364 0.158515212 467.1781961 343831.8553 0.049197384 0.055717576 3.23E-07 6.490880664 -0.191960981 LSSLSLS(ph)PANHENQPSEGER ddPTM_A459_MK2206_30min_R2 1 LSSLSLSPANHENQPSEGER 20 0 Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3;G8JLP4 Q9Y4F3-3 KIAA0430 Meiosis arrest female protein 1 1 LS(0.004)S(0.003)LS(0.075)LS(0.917)PANHENQPSEGER 101.3 0.00046868 5402100 7613.7 14192 10021 13391 15193 11292 15293 10908 12542 10498 TRUE FALSE 8196.610726 13487.24592 10355.09514 12296.91246 14596.44648 11721.72497 13285.01073 12333.71305 13632.88049 10155.45112 0.807114389 1.328079448 1.019658804 1.210868165 1.437301633 1.154229865 1.308165494 1.214491893 1.34241998 1 13.30996671 -4.753326501 24.9795964 1.230948806 0.807113604 0.471223051 0.132266708 254.7292562 784250.6333 0.031444698 0.342281238 1.76E-05 4.753326501 -0.423835201 LSSMAMIS(ph)GLSGRK ddPTM_A459_MK2206_30min_R1 2 LSSMAMISGLSGRK 14 1 Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746;Q15746-9;Q15746-11;Q15746-7 Q15746-4 MYLK "Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form" 1 LSSMAMIS(0.828)GLS(0.172)GRK;LSSMAMIS(0.979)GLS(0.021)GRK 66.989 0.022412 11905400 991.49 1190.31 1238.74 1322.06 1306.36 1161 1489.91 1327.1 693.33 899.52 TRUE FALSE 907.158569 1112.820603 1154.65778 1423.88529 1254.324915 1226.734817 1390.520822 1315.497305 765.4041346 1010.959329 0.897324495 1.100757044 1.142140685 1.408449628 1.240727376 1.213436369 1.375446848 1.301236625 0.757106753 1 9.981509243 -8.257571722 24.98007062 0.878553366 1.217317176 0.443113928 0.148416262 289.0329285 1866810.911 0.114743851 0.039701437 5.53E-09 8.257571722 0.33876381 LSSPAAFLPACNS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 LSSPAAFLPACNSPSK 16 0 Q86YS7-3;Q86YS7;Q86YS7-2;Q86YS7-4;Q86YS7-5;H0YFE9 Q86YS7-3 C2CD5 C2 domain-containing protein 5 1 LSSPAAFLPACNS(0.998)PS(0.002)K 151.03 0.00021297 65632000 23912 32320 30988 27477 24840 19848 36489 21351 19858 28944 TRUE FALSE 25742.72111 30715.0358 32021.12445 25232.04121 23864.65679 20603.32955 31697.95047 24141.64901 21585.21294 27999.55965 0.919397356 1.096982816 1.143629573 0.901158501 0.852322575 0.735844771 1.132087464 0.86221531 0.770912586 1 14.77311652 -5.836205117 8.367462381 0.888798827 1.057350545 0.27786483 0.117910854 0.330161112 32.87171108 0.03360818 0.050061668 1.46E-06 5.836205117 0.168551718 LSSPAAFLPACNSPS(ph)K ddPTM_A459_MK2206_30min_R1 2 LSSPAAFLPACNSPSK 16 0 Q86YS7-3;Q86YS7;Q86YS7-2;Q86YS7-4;Q86YS7-5;H0YFE9 Q86YS7-3 C2CD5 C2 domain-containing protein 5 1 LSSPAAFLPACNS(0.292)PS(0.708)K;LS(0.001)S(0.068)PAAFLPACNS(0.182)PS(0.75)K 202.84 4.30E-07 159801000 7186.1 7767.9 7786.7 6266.9 5557.9 5612 6538.4 6129.8 7478 7331 TRUE FALSE 6574.884459 7262.208298 7258.160499 6749.577724 5336.517074 5929.74659 6102.235266 6076.207805 8255.36486 8239.219626 0.797998446 0.881419434 0.88092815 0.819201093 0.647696908 0.7196976 0.740632674 0.737473703 1.001959559 1 13.00829198 -8.267872601 24.81053366 1.000979834 0.778823995 0.629272602 0.068417573 371.4868496 1432662.604 0.07015531 0.019865073 5.40E-09 8.267872601 -0.222155839 LSSPAAFLPACNSPS(ph)K ddPTM_A459_MK2206_30min_R2 1 LSSPAAFLPACNSPSK 16 0 Q86YS7-3;Q86YS7;Q86YS7-2;Q86YS7-4;Q86YS7-5;H0YFE9 Q86YS7-3 C2CD5 C2 domain-containing protein 5 1 LSSPAAFLPACNS(0.299)PS(0.701)K 151.31 0.00020486 64423000 29524 35980 32577 32848 26048 25631 36656 31513 24101 33653 TRUE FALSE 31784.38014 34193.28552 33663.10092 30164.21332 25025.22464 26606.40567 31843.02317 35631.8573 26197.26142 32554.90537 0.976331517 1.050326675 1.034040816 0.926564307 0.768708259 0.81727793 0.978132875 1.09451577 0.804710108 1 14.99058732 -5.809285598 5.798608784 0.908678244 1.023348499 0.212786299 0.094688471 0.301782432 23.04066734 0.028646114 0.043851056 1.55E-06 5.809285598 0.114670256 LSSS(ph)KENLDASK ddPTM_A459_MK2206_30min_R1 1 LSSSKENLDASK 12 1 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 LSS(0.046)S(0.954)KENLDASK 188.09 0.00057469 31236000 4518.8 5242.8 5652.7 4029.4 2848.9 2786.1 3564.2 3769.1 5064.9 4960.7 TRUE FALSE 4134.452331 4901.492767 5269.010473 4339.745086 2735.42228 2943.846574 3326.438721 3736.147156 5591.41448 5575.268967 0.741570022 0.879149113 0.945068391 0.778392058 0.490635034 0.528018754 0.596641837 0.670128594 1.002895916 1 12.44482569 -10.88454012 14.87889221 0.999999367 0.728986219 0.188853364 0.162801927 4.79E-10 0 0.174943263 0.042429974 1.30E-11 10.88454012 -0.271013148 LSSS(ph)PPSGSGGGGGASSSSHCSGESQCR ddPTM_A459_MK2206_30min_R1 1 LSSSPPSGSGGGGGASSSSHCSGESQCR 28 0 Q9Y4X0-2;Q9Y4X0-3;Q9Y4X0 Q9Y4X0-2 AMMECR1 AMME syndrome candidate gene 1 protein 1 LS(0.033)S(0.127)S(0.623)PPS(0.2)GS(0.017)GGGGGASSSSHCSGESQCR 133.13 1.78E-12 2553700 712.92 378 370.02 486.68 1063.8 970.73 628.49 528.05 246.42 325.7 TRUE FALSE 652.2824103 353.3921313 344.9040733 524.1641779 1021.426593 1025.691894 586.5645788 523.4333145 272.0362408 366.0501749 1.781948091 0.965419922 0.942231686 1.431946257 2.790400506 2.802052735 1.602415786 1.429949636 0.743166537 1 8.515897604 -6.009333556 24.7358588 1.825487283 1.200699621 0.093066301 0.663611933 813.1082576 2154916.903 0.206783794 0.288631284 9.79E-07 6.009333556 -0.624787662 LSSS(ph)SATLLNSPDR ddPTM_A459_MK2206_30min_R1 3 LSSSSATLLNSPDR 14 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LSS(0.034)S(0.844)S(0.121)AT(0.002)LLNSPDR;LS(0.002)S(0.491)S(0.493)S(0.014)ATLLNSPDR;LS(0.251)S(0.18)S(0.559)S(0.01)ATLLNSPDR 244.57 4.44E-20 44084000 6669.4 5418.8 6114.5 5485.8 6731.2 6402.9 6446.8 5053.6 4769.8 4472.1 TRUE FALSE 6102.132508 5066.035135 5699.464776 5908.317267 6463.08205 6765.426665 6016.745735 5009.416908 5265.637779 5026.137511 1.214079896 1.007938029 1.13396515 1.175518428 1.285894394 1.34604886 1.197091349 0.99667327 1.047650958 1 12.29523443 -7.758213024 24.96529394 1.016621559 1.193498987 0.484026463 0.084960193 80.9457706 626368.1516 0.047999321 0.026217658 1.74E-08 7.758213024 0.176877427 LSSS(ph)SATLLNSPDR ddPTM_A459_MK2206_30min_R2 3 LSSSSATLLNSPDR 14 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LSS(0.033)S(0.919)S(0.047)AT(0.001)LLNSPDR;LS(0.002)S(0.059)S(0.827)S(0.096)AT(0.017)LLNSPDR;LSS(0.002)S(0.995)S(0.001)AT(0.001)LLNSPDR 227.91 3.63E-13 36698100 90302 115532 78873 94887 90647 94502 98060 76431 58117 76112 TRUE FALSE 97215.59055 109794.8489 81502.58645 87134.42857 87087.74332 98098.33983 85184.60421 86420.79413 63171.91161 73628.47167 1.320353232 1.491200977 1.106943885 1.183433889 1.182799824 1.33234247 1.156951954 1.173741518 0.857982112 1 16.16797613 -4.066714024 0.151197961 0.894575666 1.921091777 0.486651678 0.120269513 28.84907936 0.592493438 0.541001932 5.898656691 8.58E-05 4.066714024 1.026516111 LSSS(ph)VSAMR ddPTM_A459_MK2206_30min_R1 2 LSSSVSAMR 9 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4M5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 LS(0.068)S(0.148)S(0.782)VS(0.001)AMR;LSS(0.13)S(0.868)VS(0.002)AMR 144.77 0.0019179 9527300 3966.8 2665.2 3455.3 2724.62 3753.3 3721 3920.8 3581.4 3035.5 3012 TRUE FALSE 3629.40283 2491.694996 3220.763863 2934.470704 3603.798113 3931.679804 3659.250586 3550.088197 3351.051088 3385.149299 1.072154434 0.7360665 0.951439236 0.866865962 1.064590597 1.161449454 1.080971698 1.048724261 0.989927117 1 11.72500375 -6.268446629 24.24933132 1.066406752 0.897648864 0.401962091 0.089566881 325.3974522 1126070.794 0.026606234 0.030838612 5.39E-07 6.268446629 -0.168757888 LSSS(ph)VSAMR ddPTM_A459_MK2206_30min_R2 2 LSSSVSAMR 9 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4M5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 LS(0.006)S(0.124)S(0.758)VS(0.113)AMR;LS(0.003)S(0.108)S(0.889)VSAMR 119.53 0.0068681 10112200 40874 45472 44645 50664 45508 50617 40635 34487 40815 44700 TRUE FALSE 44003.34487 43213.9266 46133.44202 46524.58913 43721.12726 52543.2654 35299.57569 38994.56931 44365.01492 43241.44266 1.017619722 0.999363665 1.06688027 1.075925924 1.011093168 1.215113608 0.816336679 0.901786964 1.02598369 1 15.40012704 -7.273506719 24.99806267 0.927842427 1.059602373 0.393808615 0.077587643 798.5553746 1654238.907 0.032082342 0.021810015 5.33E-08 7.273506719 0.131759946 LSSSDRYSDAS(ph)DDSFSEPR ddPTM_A459_MK2206_30min_R1 1 LSSSDRYSDASDDSFSEPR 19 1 Q9NRF8 Q9NRF8 CTPS2 CTP synthase 2 1 LSSS(0.002)DRY(0.167)S(0.36)DAS(0.428)DDS(0.033)FS(0.01)EPR 65.105 0.013486 4690500 861.16 811.66 729.03 945.87 1001.8 885.5 1045.4 668.79 743.98 629.46 TRUE FALSE 787.9138199 758.8207865 679.5454748 1018.721071 961.8961847 935.6362448 975.6632734 662.9428395 821.3193834 707.442257 1.113750009 1.072625757 0.960566701 1.440005967 1.35968155 1.322561998 1.379141921 0.937098163 1.160970207 1 9.466468587 -7.769450808 24.9998818 1.036775651 1.234632453 0.27361393 0.151364912 285.6730702 891434.4311 0.089432614 0.044156773 1.70E-08 7.769450808 0.197856802 LSSSGAPPADFPS(ph)PR ddPTM_A459_MK2206_30min_R1 3 LSSSGAPPADFPSPR 15 0 Q8NG08 Q8NG08 HELB DNA helicase B 1 LSSSGAPPADFPS(1)PR;LSSSGAPPADFPS(1)PR;LSSSGAPPADFPS(1)PR 198.61 4.52E-06 43557000 5498.5 5911.3 5731 4324.6 5458 5781.8 5377.2 4997 5168.6 4832 TRUE FALSE 5030.823701 5526.473296 5341.995687 4657.681441 5240.596302 6109.160519 5018.496799 4953.311756 5705.894466 5430.62464 0.926380303 1.017649656 0.983679787 0.857669559 0.965008015 1.124946194 0.924110417 0.912107186 1.050688428 1 12.40690243 -6.535116342 24.9965596 0.997873787 0.948759033 0.130684624 0.068192173 578.0717804 1180763.883 0.02342432 0.023439398 2.92E-07 6.535116342 -0.049114754 LSSSGAPPADFPS(ph)PR ddPTM_A459_MK2206_30min_R2 4 LSSSGAPPADFPSPR 15 0 Q8NG08 Q8NG08 HELB DNA helicase B 1 LSSSGAPPADFPS(1)PR;LSSSGAPPADFPS(1)PR;LSSSGAPPADFPS(1)PR;LSSSGAPPADFPS(1)PR 215.93 3.76E-09 68666500 120411 147025 125713 142767 154117 150245 152442 112369 122207 147575 TRUE FALSE 129629.7587 139723.9523 129904.2087 131102.4794 148065.5922 155962.6788 132426.1823 127056.0141 132836.344 142759.6398 0.90802806 0.978735674 0.909950521 0.918344145 1.037167034 1.092484395 0.927616394 0.889999542 0.930489486 1 17.12322864 -2.826975915 18.04429478 0.959242874 0.440697552 0 0.062620779 0 0 0.015524837 0 0.001489444 2.826975915 -0.518545322 LSSSPPRAS(ph)PVR ddPTM_A459_MK2206_30min_R2 1 LSSSPPRASPVR 12 1 Q9Y2K6 Q9Y2K6 USP20 Ubiquitin carboxyl-terminal hydrolase 20 1 LSSSPPRAS(1)PVR 89.561 0.014084 3560300 17177 20608 16157 22894 22472 21343 16474 14139 19732 16063 TRUE FALSE 18492.08433 19584.63669 16695.66632 21023.48697 21589.63637 22155.22282 14310.94401 15987.01585 21448.25369 15538.86563 1.190053687 1.260364634 1.074445633 1.352961501 1.389395911 1.425794093 0.920977397 1.028840601 1.380297263 1 13.92359357 -8.80197675 0.442459328 1.001517177 1.255533723 0.132513814 0.163818784 3.556234975 1.521722963 0.284229347 0.114416597 1.58E-09 8.80197675 0.254016545 LSSSSATLLNS(ph)PDR ddPTM_A459_MK2206_30min_R1 4 LSSSSATLLNSPDR 14 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LSSSSATLLNS(1)PDR;LSSSSATLLNS(1)PDR;LSSSSATLLNS(1)PDR;LSSSSATLLNS(1)PDR 254.72 4.95E-28 294618000 8301.6 6442.15 6486.34 5374.94 7113.71 6679.84 7738.1 6377.86 6570.17 6848.72 TRUE FALSE 7595.505327 6022.764864 6046.065313 5788.91881 6830.355867 7058.046768 7221.905468 6322.099042 7253.162683 7697.191139 0.986789231 0.782462687 0.785489824 0.752081988 0.887382909 0.916963947 0.938252063 0.821351442 0.942312923 1 12.91011636 -6.477103536 9.276378675 0.912296108 0.820385601 0.277193113 0.072506107 0.65834182 129.4059926 0.0224641 0.025315576 3.33E-07 6.477103536 -0.091910508 LSSSSATLLNS(ph)PDR ddPTM_A459_MK2206_30min_R2 4 LSSSSATLLNSPDR 14 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LSSSSATLLNS(1)PDR;LSSSSATLLNS(1)PDR;LSSSSATLLNS(1)PDR;LSSSSATLLNS(1)PDR 284.44 4.99E-55 426475000 177106 215116 182850 208484 193131 188958 229029 180576 176354 217686 TRUE FALSE 190665.3715 204433.6522 188946.1277 191450.1903 185547.7065 196148.9291 198957.2172 204177.9032 191692.9521 210582.9236 0.90541706 0.970798813 0.897252847 0.909143947 0.881114685 0.931456956 0.944792739 0.969584331 0.910296755 1 17.68402893 -7.19117915 3.097513635 0.95445666 0.914514926 0.311585726 0.030147778 0.364764251 6.872585046 0.012772396 0.009239608 6.44E-08 7.19117915 -0.039941735 LSSSSATLLNS(ph)PDRAR ddPTM_A459_MK2206_30min_R1 2 LSSSSATLLNSPDRAR 16 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LSSSSATLLNS(1)PDRAR;LSSSSATLLNS(1)PDRAR 250.38 9.64E-29 13919300 5978.5 4694.4 4684 5485.2 7712 5911.4 5792.2 6329.8 3453.8 2375.58 TRUE FALSE 5469.997181 4388.793707 4366.06313 5907.671054 7404.81471 6246.098359 5405.812906 6274.459226 3812.83487 2669.884785 2.048776491 1.643813895 1.635300203 2.212706364 2.773458522 2.339463633 2.024736399 2.350086139 1.428089665 1 11.38256177 -8.458784751 3.853051802 1.00618485 2.121569984 0.581604554 0.319622753 0.16064347 4.723560611 0.349271152 0.091856883 3.48E-09 8.458784751 1.115385133 LSSSSATLLNS(ph)PDRAR ddPTM_A459_MK2206_30min_R2 2 LSSSSATLLNSPDRAR 16 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LSSSSATLLNS(1)PDRAR;LSSSSATLLNS(1)PDRAR 82.265 0.011168 25502000 35601 70012 51239 63827 87565 81084 65195 41922 81297 55268 TRUE FALSE 38326.63993 66535.30589 52947.28269 58612.12993 84126.75812 84169.70844 56634.81819 47401.34934 88368.06611 53464.60969 0.716859997 1.244473798 0.990323936 1.09627902 1.573503643 1.574306984 1.059295458 0.886593012 1.652832904 1 15.70629661 -4.760569605 24.86275227 1.231660293 0.71685935 0.256040792 0.262837037 29.811387 851645.6628 0.06700345 0.394111813 1.74E-05 4.760569605 -0.514800943 LSSSSPGATVS(ph)PSSSDAEYDKLPDADLAR ddPTM_A459_MK2206_30min_R1 2 LSSSSPGATVSPSSSDAEYDKLPDADLAR 29 1 Q8NI08-2;Q8NI08;Q8NI08-7;Q8NI08-4;Q8NI08-3 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 LSSSSPGAT(0.006)VS(0.973)PS(0.021)S(0.001)SDAEYDKLPDADLAR;LS(0.001)S(0.002)S(0.002)S(0.006)PGAT(0.151)VS(0.541)PS(0.132)S(0.132)S(0.034)DAEY(0.001)DKLPDADLAR 204.8 9.46E-43 36014000 3083.31 2802.28 2847.53 2436.19 2370.28 2305.13 2330.27 2419.24 2545.56 2182.48 TRUE FALSE 2821.058293 2619.851063 2654.247597 2623.825776 2275.866728 2435.644469 2174.82194 2398.08884 2810.180071 2452.862099 1.150108803 1.06807923 1.08210225 1.069699669 0.927841288 0.992980596 0.886646641 0.977669654 1.145673893 1 11.26025041 -6.097919375 5.413057231 0.982741815 1.093889242 0.378084442 0.065764511 0.247242838 10.89451339 0.020041093 0.026282082 7.98E-07 6.097919375 0.111147427 LSSSTVAISYS(ph)PDR ddPTM_A459_MK2206_30min_R1 4 LSSSTVAISYSPDR 14 0 Q96T17-5;Q96T17;Q96T17-2 Q96T17-5 MAP7D2 MAP7 domain-containing protein 2 1 LSSSTVAIS(0.001)YS(0.999)PDR;LSSSTVAISYS(1)PDR;LSSSTVAISYS(1)PDR;LSSSTVAISYS(1)PDR 225.29 1.04E-09 63103000 8851.9 7695.4 7804.1 6209.46 8170.5 7268.3 8619.5 7548.1 7139.8 7401.6 TRUE FALSE 8098.999422 7194.428061 7274.379435 6687.713685 7845.051684 7679.824865 8044.508882 7482.107757 7882.00776 8318.566087 0.973605227 0.864863966 0.874475163 0.803950298 0.943077401 0.923214985 0.967054754 0.899446813 0.947520003 1 13.02211915 -6.400768407 20.25598484 0.941553278 0.877305059 0.33841102 0.045860279 5.234547759 847.1962811 0.014027549 0.015905717 3.97E-07 6.400768407 -0.064248219 LSSSTVAISYS(ph)PDR ddPTM_A459_MK2206_30min_R2 3 LSSSTVAISYSPDR 14 0 Q96T17-5;Q96T17;Q96T17-2 Q96T17-5 MAP7D2 MAP7 domain-containing protein 2 1 LSSSTVAISYS(1)PDR;LSSSTVAISYS(1)PDR;LSSSTVAIS(0.005)Y(0.001)S(0.993)PDR 142.95 0.00054195 41494400 48703 56231 43084 58550 50131 54664 51246 45536.2 52938 49020 TRUE FALSE 52431.73913 53438.65031 44520.39906 53766.27771 48162.60505 56744.27682 44517.33864 51487.93769 57542.45155 47420.48141 1.105677074 1.126910751 0.938843254 1.133819736 1.015649855 1.196619586 0.938778716 1.085774251 1.213451442 1 15.53322269 LSST(ph)PPLSALGR ddPTM_A459_MK2206_30min_R2 2 LSSTPPLSALGR 12 0 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 LSS(0.003)T(0.939)PPLS(0.058)ALGR;LS(0.006)S(0.051)T(0.94)PPLS(0.002)ALGR 138.42 0.0029051 16577100 73022 77761 70539 85700 77196 81106 96124 68623 72889 70010 TRUE FALSE 78612.62046 73899.50182 72890.73505 78698.03586 74164.89716 84192.54566 83502.80333 77592.26172 79228.75347 67725.57943 1.160752276 1.091160865 1.076265949 1.162013474 1.095079552 1.243142493 1.232958124 1.1456862 1.169849769 1 16.04741321 -4.458750336 21.68612409 1.142809654 1.601922436 0.001219586 0.070050037 21179900.1 94225799.56 0.017695825 460443515.6 3.48E-05 4.458750336 0.459112783 LSSWDQAET(ph)PGHTPSLR ddPTM_A459_MK2206_30min_R1 2 LSSWDQAETPGHTPSLR 17 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LSSWDQAET(0.774)PGHT(0.181)PS(0.044)LR;LS(0.026)S(0.087)WDQAET(0.883)PGHT(0.003)PSLR 144.08 0.0011569 15951200 2327.06 2796.09 2820.04 2216.91 2421.78 2484.43 2681.85 2403.63 2603.23 2856.5 TRUE FALSE 2129.131327 2614.064033 2628.623542 2387.656792 2325.315374 2625.09628 2502.94868 2382.615316 2873.845074 3210.384785 0.663201289 0.814252561 0.81878769 0.743729164 0.724310489 0.817688986 0.779641335 0.742158799 0.895171534 1 11.64853051 -8.485171404 3.145049886 0.999138368 0.767135588 0.731881088 0.046687194 0.112887721 2.529330761 0.044367257 0.011815286 3.27E-09 8.485171404 -0.232002779 LSSWDQAETPGHT(ph)PSLR ddPTM_A459_MK2206_30min_R1 3 LSSWDQAETPGHTPSLR 17 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LSSWDQAETPGHT(0.561)PS(0.439)LR;LSSWDQAET(0.004)PGHT(0.735)PS(0.261)LR;LSSWDQAETPGHT(0.79)PS(0.21)LR 142.23 0.00067702 13843900 4170.63 4052.09 3825.09 3372.84 3833.12 4083.78 4977.52 3980.95 4286.51 5162.1 TRUE FALSE 3815.896018 3788.298204 3565.453548 3632.616721 3680.438714 4315.000094 4645.478723 3946.144974 4732.108054 5801.61992 0.657729405 0.65297249 0.614561725 0.62613835 0.634381218 0.743757805 0.800720969 0.680179851 0.81565289 1 12.50224007 -9.00338423 0.314200203 1.060698281 0.611134086 0.856327651 0.043511482 1.174513116 0.243949415 0.163360781 0.057172056 9.92E-10 9.00338423 -0.449564195 LSSWDQAETPGHT(ph)PSLR ddPTM_A459_MK2206_30min_R2 4 LSSWDQAETPGHTPSLR 17 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LSSWDQAETPGHT(0.893)PS(0.107)LR;LSSWDQAETPGHT(0.914)PS(0.086)LR;LSSWDQAETPGHT(0.715)PS(0.285)LR;LSSWDQAETPGHT(0.711)PS(0.288)LR 153.36 0.0004092 15534100 98328 106988 93463 120545 97459 118704 133936 102330 94493 113350 TRUE FALSE 105856.0673 101675.1315 96579.00977 110696.0879 93632.26997 123221.3639 116350.0423 115704.8824 102711.8303 109651.3988 0.965387295 0.927257952 0.880782287 1.009527367 0.853908578 1.123755513 1.061090361 1.055206624 0.936712449 1 16.74256469 -6.758960909 24.99999928 1.040411985 0.929342121 0.447817577 0.059800443 60.42006381 609450.3399 0.019836401 0.018965827 1.74E-07 6.758960909 -0.111069864 LST(ph)IQNSPTK ddPTM_A459_MK2206_30min_R2 2 LSTIQNSPTK 10 0 Q5VYV7 Q5VYV7 SLX4IP Protein SLX4IP 1 LS(0.085)T(0.794)IQNS(0.111)PT(0.01)K;LS(0.003)T(0.833)IQNS(0.146)PT(0.018)K 138.89 0.0037113 46652000 234020 258432 212978 232670 223545 172113 263263 194382 202373 238746 TRUE FALSE 251936.7511 245598.6427 220078.5802 213660.1167 214767.5001 178662.8808 228696.2519 219788.3948 219975.0377 230955.7376 1.090844305 1.063401348 0.952903715 0.925112833 0.929907619 0.773580612 0.990216802 0.95164726 0.952455393 1 17.81725686 -5.263326117 2.555725967 0.925635419 1.089993461 0.490816326 0.058533103 0.243617529 3.051796582 0.016388353 0.053435969 5.45E-06 5.263326117 0.164358042 LSTASCPT(ph)PK ddPTM_A459_MK2206_30min_R1 2 LSTASCPTPK 10 0 H0YJ30;G3V582;F5H039;Q9NQX3;Q9NQX3-2 H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase 1 LST(0.001)AS(0.013)CPT(0.986)PK;LS(0.001)T(0.001)AS(0.016)CPT(0.982)PK 116.84 0.014525 7778300 6582.7 6412.2 5962.1 6050.8 5389.1 4121 5375.3 5316.2 5351.1 5074.4 TRUE FALSE 6022.806798 5994.764615 5557.409263 6516.833664 5174.440735 4354.327459 5016.723545 5269.721024 5907.365994 5703.054982 1.05606676 1.051149714 0.974461807 1.142691713 0.907310337 0.763507887 0.879655476 0.924017222 1.035824837 1 12.47751923 -6.291476239 22.74413166 0.904906311 1.04990865 0.418441223 0.078437863 221.2796046 167553.5163 0.025258294 0.028646998 5.11E-07 6.291476239 0.14500234 LSTEADT(ph)DTPK ddPTM_A459_MK2206_30min_R1 1 LSTEADTDTPK 11 0 Q9BYW2;H7C3H4;A0A1W2PPX9 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 LSTEADT(0.677)DT(0.323)PK 111.94 0.018617 6519200 3809.6 5000 4392.1 4522.4 3037.8 2499.5 3080.1 3117.2 4280.3 3788.9 TRUE FALSE 3485.573515 4674.499091 4093.976489 4870.716032 2916.797993 2641.01953 2874.632149 3089.946649 4725.252502 4258.297537 0.818536865 1.097738956 0.961411563 1.143817685 0.684968105 0.620205495 0.675066062 0.725629579 1.109657665 1 12.05606104 -6.268413011 24.96814639 0.773374091 1.008833268 0.255692282 0.16500084 663.6617757 2376147.809 0.051055832 0.059117921 5.39E-07 6.268413011 0.235459177 LSTEADTDT(ph)PK ddPTM_A459_MK2206_30min_R1 3 LSTEADTDTPK 11 0 Q9BYW2;H7C3H4;A0A1W2PPX9 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 LSTEADT(0.003)DT(0.997)PK;LSTEADT(0.014)DT(0.986)PK;LSTEADT(0.079)DT(0.921)PK 138.2 0.0029701 14877600 7536.3 10395.7 10468.7 8492.6 6059.2 5201.4 6607.9 6763.8 9099.7 8625.7 TRUE FALSE 6895.29811 9718.93804 9758.113811 9146.701524 5817.849233 5495.898773 6167.099048 6704.66481 10045.64638 9694.316837 0.711272205 1.002539756 1.006580863 0.943511717 0.600129883 0.566919657 0.636156126 0.691607766 1.036240774 1 13.24292352 -6.239973942 24.19343499 0.724392307 0.928631056 0.165349586 0.167723967 787.452859 887527.6056 0.050198785 0.064734193 5.75E-07 6.239973942 0.204238748 LSTEADTDT(ph)PK ddPTM_A459_MK2206_30min_R2 1 LSTEADTDTPK 11 0 Q9BYW2;H7C3H4;A0A1W2PPX9 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 LSTEADT(0.017)DT(0.983)PK 119.21 0.011892 14965000 76803 72901 76559 59791 59813 42278 80574 53492 54321 68822 TRUE FALSE 82683.09673 69280.84235 79111.43885 54905.88404 57464.44108 43886.91892 69994.53701 60483.58807 59045.74239 66576.34378 1.24192907 1.040622516 1.188281518 0.824705607 0.86313603 0.659196892 1.05134246 0.908484675 0.88688773 1 16.02272202 -5.760144976 24.99999836 0.877642497 1.145312226 0.565172522 0.109111021 25.27229408 488083.6848 0.030098169 0.048670859 1.74E-06 5.760144976 0.267669729 LSTGS(ph)FPEDLLESDSSR ddPTM_A459_MK2206_30min_R1 2 LSTGSFPEDLLESDSSR 17 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 LS(0.081)T(0.128)GS(0.789)FPEDLLES(0.001)DSSR;LS(0.369)T(0.248)GS(0.383)FPEDLLESDSSR 179.9 7.97E-08 4215100 706.82 640.89 812 880.23 851.63 569.79 628.98 937.94 640.01 735.68 TRUE FALSE 646.7012473 599.1679445 756.8837024 948.0254671 817.7077737 602.0510174 587.0218918 929.7396895 706.5413298 826.8215925 0.782153312 0.724664123 0.915413566 1.146590118 0.988977285 0.728151058 0.709974071 1.12447437 0.854526945 1 9.691432255 -5.294914888 7.376388839 0.932548588 0.753390526 0.21493679 0.137728977 0.343935405 65.05697861 0.038683715 0.083031654 5.07E-06 5.294914888 -0.179158063 LSTGS(ph)FPEDLLESDSSR ddPTM_A459_MK2206_30min_R2 1 LSTGSFPEDLLESDSSR 17 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 LS(0.004)T(0.019)GS(0.975)FPEDLLES(0.001)DSSR 71.286 0.030047 3664000 0 600.46 1072.7 552.13 1236.9 852.14 896.71 506.2 820.68 1018.6 TRUE FALSE 0 570.6420296 1108.463283 507.0192128 1188.333091 884.5687848 778.9708999 572.362078 892.061263 985.3631654 0 0.579118491 1.124928678 0.514550605 1.205984892 0.897708394 0.790541931 0.58086409 0.905312167 1 9.944511732 -4.876558072 3.490798629 0.859479959 2.30E-20 0.62747912 0.205473365 0.165446604 3.418769824 0.050693365 0.322864937 1.33E-05 4.876558072 -0.859479959 LSTIQNS(ph)PTK ddPTM_A459_MK2206_30min_R2 2 LSTIQNSPTK 10 0 Q5VYV7 Q5VYV7 SLX4IP Protein SLX4IP 1 LS(0.005)T(0.085)IQNS(0.829)PT(0.081)K;LS(0.003)T(0.175)IQNS(0.659)PT(0.163)K 166.62 0.00032057 48937000 204909 228280 193038 224160 219955 167313 239020 176401 149188 218330 TRUE FALSE 220596.9906 216943.9472 199473.7906 205845.4109 211318.4615 173680.2135 207636.3869 199457.2164 162164.1026 211205.91 1.0444641 1.027167976 0.944451747 0.974619559 1.0005329 0.822326484 0.983099322 0.944373272 0.76780097 1 17.68829068 -5.148841167 0.539106368 0.905042716 1.107164857 0.28712799 0.071236219 3.816029288 1.12184458 0.043327548 0.461816836 7.10E-06 5.148841167 0.202122141 LSTIQNS(ph)PTKK ddPTM_A459_MK2206_30min_R2 1 LSTIQNSPTKK 11 1 Q5VYV7 Q5VYV7 SLX4IP Protein SLX4IP 1 LSTIQNS(0.981)PT(0.019)KK 120.59 0.0083817 0 14357 17312 14681 14574 14158 12163 14556 9942 8553 14671 TRUE FALSE 15456.18296 16452.31125 15170.45721 13383.25758 13602.08578 12625.87149 12644.77972 11241.45354 9296.92448 14192.28647 1.08905517 1.159243177 1.068922703 0.942995169 0.958413981 0.889629132 0.890961421 0.792081921 0.655068829 1 13.79281942 -6.13687588 0.731753859 0.811949466 1.151382451 0.625985694 0.086195522 0.499643128 0.554905166 0.048985022 0.103058165 7.30E-07 6.13687588 0.339432985 LSVGEQPDVTHDPY(ph)EFLQSPEPAASAK ddPTM_A459_MK2206_30min_R2 1 LSVGEQPDVTHDPYEFLQSPEPAASAK 27 0 Q9H8M2;Q9H8M2-2;Q9H8M2-3;Q9H8M2-1;Q9H8M2-6 Q9H8M2 BRD9 Bromodomain-containing protein 9 1 LSVGEQPDVTHDPY(0.887)EFLQS(0.113)PEPAASAK 110.25 7.38E-09 17244000 67489 82401 85367 83401 91932 76790 95998 71413 75612 78522 TRUE FALSE 72656.00973 78309.08616 88213.09317 76586.87151 88322.28776 79712.29726 83393.34729 80746.9243 82188.59508 75959.83357 0.956505647 1.030927564 1.161312355 1.008254862 1.162749885 1.049400631 1.097861111 1.063021343 1.082000726 1 16.21294912 -4.92124086 4.098771178 1.081458052 0.960475146 0.33972889 0.051826512 0.220337591 6.751061913 0.011850916 0.059154524 1.20E-05 4.92124086 -0.120982906 LSVGEQPDVTHDPYEFLQS(ph)PEPAASAK ddPTM_A459_MK2206_30min_R1 1 LSVGEQPDVTHDPYEFLQSPEPAASAK 27 0 Q9H8M2;Q9H8M2-2;Q9H8M2-3;Q9H8M2-1;Q9H8M2-6 Q9H8M2 BRD9 Bromodomain-containing protein 9 1 LSVGEQPDVTHDPY(0.003)EFLQS(0.997)PEPAASAK 137.29 2.50E-12 11636000 2096.2 2230.9 2295.1 1965.7 2188 2143.1 2269.1 2300.6 1745.8 1780.4 TRUE FALSE 1917.907182 2085.668005 2139.315007 2117.098555 2100.847327 2264.44047 2117.732479 2280.486097 1927.282157 2000.969393 0.958489015 1.042328789 1.069139295 1.058036451 1.049914773 1.131671717 1.058353259 1.139690644 0.963174231 1 10.96648338 -4.736875725 2.47464516 1.065973128 0.92651806 0.253807714 0.050073432 0.777083567 5.384497136 0.012223037 0.243833604 1.83E-05 4.736875725 -0.139455068 LSVGEQPDVTHDPYEFLQS(ph)PEPAASAK ddPTM_A459_MK2206_30min_R2 2 LSVGEQPDVTHDPYEFLQSPEPAASAK 27 0 Q9H8M2;Q9H8M2-2;Q9H8M2-3;Q9H8M2-1;Q9H8M2-6 Q9H8M2 BRD9 Bromodomain-containing protein 9 1 LSVGEQPDVTHDPY(0.003)EFLQS(0.997)PEPAAS(0.001)AK;LSVGEQPDVTHDPY(0.008)EFLQS(0.989)PEPAAS(0.003)AK 112.06 4.41E-10 27889000 58316.3 71637 67904 70521 75039 68679 69943 54877.8 60221.1 70337 TRUE FALSE 62781.04077 68079.61075 70167.88547 64759.20871 72092.59182 71292.62747 60759.40008 62050.51688 65459.02242 68041.90945 0.922681936 1.000554089 1.031245096 0.951754723 1.059532168 1.047775232 0.892970238 0.911945555 0.962039763 1 16.05413601 -10.21433909 5.339763056 1 0.977566868 0.016189453 0.05517223 59332267.31 6.696358832 1.688835114 0.014844355 6.10E-11 10.21433909 -0.022433132 LSVGS(ph)VTSRPSTPTLGTPTPQTMSVSTK ddPTM_A459_MK2206_30min_R2 1 LSVGSVTSRPSTPTLGTPTPQTMSVSTK 28 1 Q16594;D6RIE8 Q16594 TAF9 Transcription initiation factor TFIID subunit 9 1 LS(0.006)VGS(0.183)VT(0.145)S(0.145)RPS(0.183)T(0.183)PT(0.145)LGT(0.006)PT(0.003)PQTMSVSTK 48.118 0.020847 7408000 11598 15638 14863 17747 18065 16617 22628 17803 21199 22999 TRUE FALSE 12485.9518 14861.43966 15358.525 16297.01333 17355.67733 17249.37158 19656.91642 20129.91323 23042.8507 22248.54451 0.561203084 0.667973568 0.690315944 0.732497954 0.780081471 0.775303372 0.883514713 0.904774387 1.03570149 1 14.44142334 -6.759042312 0.409346991 1.03686422 0.561979898 0.933474738 0.03697045 0.337589927 0.117273632 0.038368304 0.063395923 1.74E-07 6.759042312 -0.474884322 LSVGSVT(ph)S(ph)RPSTPTLGTPTPQTMSVSTK ddPTM_A459_MK2206_30min_R1 1 LSVGSVTSRPSTPTLGTPTPQTMSVSTK 28 1 Q16594;D6RIE8 Q16594 TAF9 Transcription initiation factor TFIID subunit 9 2 LS(0.039)VGS(0.221)VT(0.474)S(0.474)RPS(0.32)T(0.32)PT(0.1)LGT(0.024)PT(0.016)PQT(0.005)MS(0.004)VS(0.001)T(0.001)K 55.26 0.028217 8242600 1248.9 1176.5 1290.6 1172.3 1290.6 1094.7 1070 1141 743.22 874.92 TRUE FALSE 1142.674497 1099.909636 1202.997668 1262.590749 1239.192669 1156.680968 998.6222523 1131.024357 820.4803786 983.3116949 1.162067433 1.118576787 1.22341438 1.284018847 1.260223666 1.176311615 1.015570401 1.150219572 0.834405187 1 9.941504991 -7.642963678 1.233246581 0.949746471 1.20898483 0.613029031 0.08108979 0.332231454 0.933766153 0.065956809 0.027831582 2.28E-08 7.642963678 0.259238359 LSVGSVTSRPS(ph)TPTLGTPTPQTMSVSTK ddPTM_A459_MK2206_30min_R1 1 LSVGSVTSRPSTPTLGTPTPQTMSVSTK 28 1 Q16594;D6RIE8 Q16594 TAF9 Transcription initiation factor TFIID subunit 9 1 LSVGS(0.033)VT(0.087)S(0.076)RPS(0.271)T(0.271)PT(0.207)LGT(0.034)PT(0.019)PQTMSVSTK 60.172 0.0023561 17118000 1610.7 2099.6 2473.6 1908.3 2470 2219.2 2581.2 2529.9 2456 2317.5 TRUE FALSE 1473.701507 1962.915658 2305.698924 2055.277597 2371.61467 2344.849186 2409.012858 2507.781351 2711.309989 2604.609396 0.565805187 0.753631489 0.885237889 0.789092445 0.910545233 0.900269034 0.924903696 0.962824351 1.040966063 1 11.34685132 -3.906584569 0.37906494 0.994089255 9.48E-18 0.866507699 0.048065268 4.271887424 0.291436582 0.041322519 2.203307666 0.000123998 3.906584569 -0.994089255 LSVGSVTSRPST(ph)PTLGTPTPQTMSVSTK ddPTM_A459_MK2206_30min_R2 1 LSVGSVTSRPSTPTLGTPTPQTMSVSTK 28 1 Q16594;D6RIE8 Q16594 TAF9 Transcription initiation factor TFIID subunit 9 1 LS(0.001)VGS(0.027)VT(0.085)S(0.085)RPS(0.322)T(0.364)PT(0.108)LGT(0.007)PT(0.003)PQTMSVSTK 57.443 0.0090766 7960800 13499 17226 13902 15904 18164 17441 18409 19251 18995 22890 TRUE FALSE 14532.49382 16370.58189 14365.48574 14604.59233 17450.79009 18104.72948 15991.87619 21767.1718 20647.15076 22143.10117 0.65629894 0.739308454 0.648756722 0.659554965 0.788091512 0.817623933 0.722205804 0.983022731 0.932441694 1 14.43456967 -7.565916424 0.693719374 1.01049559 0.678620188 0.796158115 0.057853562 0.305932976 0.284692317 0.052735357 0.028853098 2.72E-08 7.565916424 -0.331875401 LSVHDMKPLDS(ph)PGRR ddPTM_A459_MK2206_30min_R2 1 LSVHDMKPLDSPGRR 15 2 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 LSVHDMKPLDS(1)PGRR 74.338 0.015955 19016000 30299 80533 59343 112270 130340 131960 113950 78733 96146 75948 TRUE FALSE 32618.71474 76533.84833 61321.466 103097.1819 125222.1967 136981.8303 98988.22812 89023.67343 104508.6053 73469.82298 0.443974321 1.041704542 0.834648343 1.403258885 1.704403136 1.864463867 1.34733179 1.211703933 1.422469812 1 16.16486418 -5.762783022 4.334040593 1.462909488 0.787659133 0.557852265 0.263571611 0.150923733 6.700552958 0.076923791 0.127640386 1.73E-06 5.762783022 -0.675250355 LSVPTS(ph)DEEDEVPAPK ddPTM_A459_MK2206_30min_R2 2 LSVPTSDEEDEVPAPK 16 0 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 LSVPT(0.186)S(0.814)DEEDEVPAPK;LSVPT(0.186)S(0.814)DEEDEVPAPK 205.28 1.44E-07 6041100 73381 49599 42313 55960 42764 40662 67187 56596 36751 59164 TRUE FALSE 78999.10578 47135.98578 43723.6943 51387.88899 41084.87049 42209.4209 58365.26619 63993.29152 39947.53555 57233.48353 1.380295256 0.823573595 0.76395305 0.897864079 0.717846756 0.737495227 1.019774835 1.118109323 0.697974911 1 15.8045718 -4.758854842 24.98040853 0.862025558 1.380295948 0.564387862 0.136047723 53.68503692 518777.3982 0.034976947 0.231740861 1.74E-05 4.758854842 0.51827039 LSVPTS(ph)DEEDEVPAPKPR ddPTM_A459_MK2206_30min_R1 3 LSVPTSDEEDEVPAPKPR 18 1 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 LSVPT(0.219)S(0.781)DEEDEVPAPKPR;LSVPT(0.039)S(0.961)DEEDEVPAPKPR;LSVPT(0.033)S(0.967)DEEDEVPAPKPR 197.6 1.30E-10 255856300 16388.3 18583 17439.4 16623.8 16326.2 15240.4 14541 14799 14369.1 10305.9 TRUE FALSE 14994.38903 17373.24332 16255.66212 17904.16796 15675.89288 16103.29828 13570.99642 14669.6139 15862.81937 11582.6727 1.294553461 1.499933891 1.403446557 1.545771725 1.353391682 1.390292094 1.171663637 1.266513722 1.36953014 1 13.49968057 -7.127879707 3.706360121 1.224360621 1.42649811 0.470122027 0.109390106 0.233285137 5.714237809 0.042449921 0.032318359 7.45E-08 7.127879707 0.20213749 LSVPTS(ph)DEEDEVPAPKPR ddPTM_A459_MK2206_30min_R2 5 LSVPTSDEEDEVPAPKPR 18 1 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 LSVPT(0.032)S(0.968)DEEDEVPAPKPR;LSVPT(0.026)S(0.974)DEEDEVPAPKPR;LSVPT(0.031)S(0.969)DEEDEVPAPKPR;LSVPT(0.038)S(0.962)DEEDEVPAPKPR;LSVPT(0.173)S(0.827)DEEDEVPAPKPR 257.46 8.99E-42 83126900 302545 354840 299510 369094 346843 309947 420789 321263 287754 352106 TRUE FALSE 325708.0778 337219.1616 309495.5139 338937.8395 333224.2011 321742.2503 365538.8988 363253.1772 312782.3228 340616.8101 0.956230192 0.990025012 0.90863253 0.995070794 0.978296406 0.944587116 1.073167524 1.066456988 0.918282109 1 18.37779011 -7.236904456 24.97824044 1.02001475 0.963206857 0.234232154 0.045900072 1062.206293 1081400.823 0.017354544 0.01343787 5.80E-08 7.236904456 -0.056807893 LSVPYVPQVTDEDRLS(ph)R ddPTM_A459_MK2206_30min_R1 2 LSVPYVPQVTDEDRLSR 17 1 A0A1B0GUZ7;Q14156-3;Q14156-2;Q14156 A0A1B0GUZ7 EFR3A Protein EFR3 homolog A 1 LSVPYVPQVT(0.001)DEDRLS(0.999)R;LSVPYVPQVT(0.001)DEDRLS(0.999)R 122.35 0.00076562 12136600 4060.1 4698.6 3085.72 3718.5 4685.1 5120.3 5605.9 5160.5 5680.1 5130.7 TRUE FALSE 3714.767175 4392.720286 2876.269924 4004.899514 4498.482546 5410.206961 5231.94064 5115.382293 6270.566721 5766.329851 0.644216906 0.761787896 0.498804265 0.694531811 0.780129244 0.938240978 0.907325938 0.887112327 1.087445027 1 12.49343765 -6.572086223 1.739503946 0.963110944 0.642422965 0.78193299 0.07881044 0.170320097 1.051132877 0.031056017 0.032688029 2.68E-07 6.572086223 -0.320687979 LSVPYVPQVTDEDRLS(ph)R ddPTM_A459_MK2206_30min_R2 2 LSVPYVPQVTDEDRLSR 17 1 A0A1B0GUZ7;Q14156-3;Q14156-2;Q14156 A0A1B0GUZ7 EFR3A Protein EFR3 homolog A 1 LSVPYVPQVT(0.007)DEDRLS(0.993)R;LSVPYVPQVT(0.067)DEDRLS(0.933)R 110.33 0.0054476 3135400 41982 28852.4 33492 35654 32373 35356 46455 30878 40932 39106 TRUE FALSE 45196.1742 27419.63177 34608.60656 32740.95415 31101.87336 36701.49736 40355.4027 34913.86062 44492.19137 37829.97442 1.194718603 0.724812326 0.914846153 0.865476508 0.82214894 0.970169764 1.066757335 0.922915258 1.176109475 1 15.20724218 -6.988456774 6.352553838 1.033141559 0.892720622 0.202619317 0.126670269 0.232385393 39.57159176 0.043527168 0.037079824 1.03E-07 6.988456774 -0.140420938 LSVQSNPS(ph)PQLR ddPTM_A459_MK2206_30min_R2 4 LSVQSNPSPQLR 12 0 O75152;E9PBY7;E9PQ61;A0A1W2PPR9 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 LSVQS(0.003)NPS(0.997)PQLR;LSVQSNPS(1)PQLR;LSVQSNPS(1)PQLR;LSVQSNPS(1)PQLR 157.09 0.00044141 40069800 76546 90770 74218 95596 82681 90872 97616 80471 82981 71449 TRUE FALSE 82406.42061 86262.49379 76692.39108 87785.501 79434.5285 94330.19764 84798.90194 90988.836 90198.53738 69117.62498 1.192263488 1.2480535 1.109592396 1.270088505 1.149265886 1.364777763 1.226878122 1.316434643 1.305000532 1 16.07676602 -6.71588877 24.99983796 1.261412828 1.196418151 0.038689756 0.101495735 317.9137416 174481.6119 0.031028036 0.031027947 1.92E-07 6.71588877 -0.064994676 LSYLPATVEPASPT(ph)PAHSLPR ddPTM_A459_MK2206_30min_R1 1 LSYLPATVEPASPTPAHSLPR 21 0 E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5 E9PCV4 SPHK2 Sphingosine kinase 2 1 LSYLPATVEPAS(0.04)PT(0.943)PAHS(0.017)LPR 143.84 1.04E-05 31244000 5283.4 4164.8 4466.9 3396.3 4604.8 4270.1 4498.5 3915.3 3591.5 3320.9 TRUE FALSE 4834.019086 3893.670763 4163.699273 3657.883614 4421.381065 4511.869372 4198.413273 3881.068945 3964.849277 3732.318164 1.295178726 1.043231202 1.11557994 0.980056751 1.184620622 1.208865154 1.124880862 1.039854797 1.062302061 1 11.86585626 -14.52287875 0.095504151 0.606869201 1.20283082 0.211723617 0.084377765 371.4966123 2.428405174 28.8389942 1.717856104 3.00E-15 14.52287875 0.595961619 LSYLPATVEPASPT(ph)PAHSLPR ddPTM_A459_MK2206_30min_R2 1 LSYLPATVEPASPTPAHSLPR 21 0 E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5 E9PCV4 SPHK2 Sphingosine kinase 2 1 LSYLPATVEPAS(0.044)PT(0.931)PAHS(0.025)LPR 117.53 0.00010278 4590400 22486 30441 21532 29047 22595 28810 30624 20125 20091 25563 TRUE FALSE 24207.54545 28929.34421 22249.86613 26673.76718 21707.80677 29906.38474 26603.03201 22755.4066 21838.47886 24728.8814 0.978917932 1.169860607 0.899752228 1.078648352 0.877832135 1.209370705 1.075787925 0.920195549 0.883116325 1 14.59390936 -7.7697277 24.97663016 0.926241905 1.04253745 0.184530152 0.102641928 292.897058 882620.9066 0.053300042 0.026268769 1.70E-08 7.7697277 0.116295545 LSYLS(ph)APGSEYSMYSTDSR ddPTM_A459_MK2206_30min_R1 2 LSYLSAPGSEYSMYSTDSR 19 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 LSYLS(0.999)APGS(0.001)EYSMYSTDSR;LS(0.005)YLS(0.985)APGS(0.011)EYSMYSTDSR 201.9 1.48E-15 12793200 2646.7 2746.92 2395.81 1820.84 2141.65 2751.2 3604.2 2288.61 2949.1 3245.2 TRUE FALSE 2421.584267 2568.095009 2233.189092 1961.081412 2056.343545 2906.970566 3363.770394 2268.600924 3255.669498 3647.239876 0.663949822 0.704120128 0.612295645 0.537689178 0.563808144 0.797033007 0.922278355 0.622004859 0.892639258 1 11.83258937 -6.84217815 5.822104297 0.831189905 0.617045213 0.560435114 0.101839375 0.175499488 9.69656751 0.036196436 0.032055551 1.44E-07 6.84217815 -0.214144693 LSYLS(ph)APGSEYSMYSTDSR ddPTM_A459_MK2206_30min_R2 3 LSYLSAPGSEYSMYSTDSR 19 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 LS(0.001)YLS(0.991)APGS(0.005)EYSMY(0.001)STDSR;LS(0.005)YLS(0.995)APGSEYSMYSTDSR;LSYLS(1)APGSEYSMYSTDSR 210.57 1.22E-30 6291000 52168 51965 52349.4 64456 47479 53941 68174 57081 48683 72935 TRUE FALSE 56162.02219 49384.49366 54094.70287 59189.73862 45614.7359 55993.76255 59222.67191 64541.68269 52917.35934 70555.13692 0.796001888 0.699941858 0.766701125 0.838914659 0.646511904 0.793617091 0.839381433 0.914769434 0.750014268 1 16.1064635 -9.681140714 0.262325633 1.08461883 0.730277963 0.503321293 0.068059482 6.237677091 0.620571637 0.608937216 0.114809053 2.08E-10 9.681140714 -0.354340867 LSYLSAPGS(ph)EYSMYSTDSR ddPTM_A459_MK2206_30min_R1 1 LSYLSAPGSEYSMYSTDSR 19 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 LSYLSAPGS(0.956)EYS(0.028)MYS(0.006)T(0.01)DSR 161.1 1.51E-06 36136000 1112.8 1234 994.59 755.43 897.72 1150.1 1303.2 1007.4 846.26 1085.3 TRUE FALSE 1018.150516 1153.666376 927.0800019 813.6133495 861.9619114 1215.217668 1216.265906 998.592408 934.2317554 1219.755158 0.834717123 0.945817993 0.760054177 0.667030055 0.706667978 0.99628 0.997139383 0.818682669 0.765917446 1 10.25237587 -6.758833083 24.999973 0.909367531 0.784209128 0.302167421 0.100632572 107.362341 1029837.533 0.037880814 0.036239184 1.74E-07 6.758833083 -0.125158402 LSYLSAPGSEYS(ph)MYSTDSR ddPTM_A459_MK2206_30min_R2 1 LSYLSAPGSEYSMYSTDSR 19 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 LSYLSAPGS(0.085)EYS(0.727)MYS(0.033)T(0.101)DS(0.054)R 121.03 0.00043152 3768200 37434 37676 44479 38239 34120 35189 36138 36509 33529 43187 TRUE FALSE 40299.97582 35805.06463 45961.90766 35114.75138 32780.27736 36528.14205 31393.03719 41280.85165 36445.29181 41777.81173 0.964626297 0.857035425 1.100151151 0.840511983 0.784633661 0.874343115 0.751428471 0.988104689 0.872359999 1 15.35044931 LSYLSAPGSEYSMY(ph)STDSR ddPTM_A459_MK2206_30min_R1 1 LSYLSAPGSEYSMYSTDSR 19 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 LSYLSAPGS(0.055)EY(0.202)S(0.065)MY(0.27)S(0.042)T(0.235)DS(0.13)R 102.97 0.04381 4050800 1266.3 1244.5 1350.8 828.2 1042.9 1078.7 1266.6 943.99 1271.7 1424.3 TRUE FALSE 1158.594535 1163.482824 1259.11146 891.9881075 1001.359085 1139.775062 1182.107425 935.736795 1403.897766 1600.753037 0.723780939 0.726834682 0.786574462 0.557230308 0.625555012 0.712024301 0.738469581 0.584560375 0.877023334 1 10.64453503 -8.475536568 4.556038667 0.998987387 0.684518119 0.702916129 0.068937623 0.09942091 4.558461025 0.068624043 0.017907609 3.35E-09 8.475536568 -0.314469268 LSYLSAPGSEYSMYST(ph)DSR ddPTM_A459_MK2206_30min_R1 2 LSYLSAPGSEYSMYSTDSR 19 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 LSYLSAPGSEY(0.001)S(0.003)MY(0.006)S(0.105)T(0.57)DS(0.316)R;LSYLSAPGSEYSMYS(0.001)T(0.971)DS(0.029)R 292.35 3.20E-85 37463000 6072.8 6401.7 7123 5068.93 5258.3 6355.7 7901.6 5347.5 6755.1 7552.1 TRUE FALSE 5556.27647 5984.948166 6639.510606 5459.339867 5048.850776 6715.554242 7374.498681 5300.747371 7457.316818 8487.711163 0.654626007 0.705130989 0.782249829 0.643205189 0.594842435 0.791209092 0.868844208 0.624520235 0.878601625 1 13.05115985 -9.080440991 0.421552887 1.030162109 0.683482684 0.544848555 0.084814769 2.00642161 0.64691751 0.199542661 0.059157516 8.31E-10 9.080440991 -0.346679424 LSYLSAPGSEYSMYST(ph)DSR ddPTM_A459_MK2206_30min_R2 2 LSYLSAPGSEYSMYSTDSR 19 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 LSYLSAPGS(0.002)EY(0.01)S(0.014)MY(0.06)S(0.025)T(0.683)DS(0.206)R;LSYLSAPGSEYSMYS(0.007)T(0.805)DS(0.187)R 154.52 6.84E-05 10006800 98267 115814 105944 124361 108939 99887 109588 85097 81167 109366 TRUE FALSE 105790.3971 110062.8452 109476.1201 114200.3085 104661.5075 103688.2698 95198.96396 96219.47008 88226.75894 105797.3964 0.999933842 1.040317143 1.034771401 1.079424564 0.989263546 0.980064475 0.899823315 0.909469168 0.833921835 1 16.6909446 -6.954749038 1.726071501 0.9016071 1.036703934 0.620131485 0.043598546 0.216879813 1.313450343 0.019260497 0.015139925 1.11E-07 6.954749038 0.135096834 LSYLSAPGSEYSMYSTDS(ph)R ddPTM_A459_MK2206_30min_R2 3 LSYLSAPGSEYSMYSTDSR 19 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 LSYLSAPGSEYSMYS(0.001)T(0.101)DS(0.898)R;LSYLSAPGSEYSMYS(0.002)T(0.382)DS(0.616)R;LSYLSAPGSEYS(0.002)MYS(0.148)T(0.42)DS(0.429)R 240.13 8.39E-30 19578200 103860 105315 114374 110487 100225 100641 105561 82338 85408 106849 TRUE FALSE 111811.6015 100085.2102 118187.1721 101459.8587 96289.66291 104470.9638 91700.7139 93099.85931 92836.63346 103362.5259 1.081742155 0.968293 1.1434238 0.981592292 0.93157227 1.010723789 0.887175629 0.900711922 0.898165294 1 16.65735371 -5.99123857 24.61137184 0.936219203 1.056140533 0.507961754 0.055448767 135.9816909 381975.2529 0.015446118 0.022868673 1.02E-06 5.99123857 0.11992133 LT(ph)GLGQSNAALR ddPTM_A459_MK2206_30min_R1 2 LTGLGQSNAALR 12 0 Q08378-2;Q08378 Q08378-2 GOLGA3 Golgin subfamily A member 3 1 LT(1)GLGQSNAALR;LT(1)GLGQSNAALR 110.38 0.00982 358510000 9976.6 9036.1 9450.4 8473.4 9780.6 9424.1 8767.4 7631.2 7963.4 6276.1 TRUE FALSE 9128.037781 8447.848248 8808.933178 9126.022736 9391.017991 9957.684398 8182.542743 7564.481223 8791.223927 7053.63065 1.294090694 1.197659569 1.248850927 1.293805019 1.331373651 1.411710492 1.160046953 1.072423777 1.24634027 1 12.78415032 -7.464284716 8.600961702 1.118804224 1.290922984 0.56298718 0.076972737 0.302652915 42.19999958 0.032927999 0.022056861 3.43E-08 7.464284716 0.17211876 LT(ph)GLGQSNAALR ddPTM_A459_MK2206_30min_R2 1 LTGLGQSNAALR 12 0 Q08378-2;Q08378 Q08378-2 GOLGA3 Golgin subfamily A member 3 1 LT(1)GLGQSNAALR 92.856 0.028599 7694000 22389 28381 26172 34024 27554 28448 31627 26738 26141 24545 TRUE FALSE 24103.11905 26971.64081 27044.56142 31244.13036 26472.09151 29530.60857 27474.33691 30232.74841 28414.69693 23744.09866 1.015120405 1.135930287 1.139001392 1.315869295 1.114891405 1.243703077 1.157101699 1.273274208 1.196705646 1 14.53528137 -4.741856552 1.601784677 1.194684009 0.939246583 0.249081319 0.084517526 1.391742233 3.205528995 0.021891428 0.577026403 1.81E-05 4.741856552 -0.255437426 LT(ph)IAEER ddPTM_A459_MK2206_30min_R2 1 LTIAEER 7 0 P62701;Q8TD47 P62701 RPS4X;RPS4Y2 "40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2" 1 LT(1)IAEER 102.62 0.044809 1358300 8972.7 9104.7 7482.6 10832 8892.2 9933.1 13009 10219 8336.4 8296 TRUE FALSE 9659.656811 8652.573837 7732.066149 9946.99095 8543.047548 10311.11108 11300.90267 11554.65839 9061.485003 8025.302199 1.203650227 1.078161747 0.963461058 1.239453756 1.064514125 1.284825272 1.408159144 1.439778603 1.12911449 1 12.97034 -6.770894239 24.4342095 1.289598207 1.107155518 0.182437715 0.140134528 197.3775376 510079.1312 0.047941303 0.04285678 1.69E-07 6.770894239 -0.182442688 LT(ph)ILRMAVSHMKSMRGTGNK ddPTM_A459_MK2206_30min_R1 1 LTILRMAVSHMKSMRGTGNK 20 3 A0A087WVE9;Q9HBZ2-2;Q9HBZ2 A0A087WVE9 ARNT2 Aryl hydrocarbon receptor nuclear translocator 2 1 LT(0.979)ILRMAVS(0.016)HMKS(0.005)MRGT(0.001)GNK 42.863 0.046267 0 282.72 355.07 417.71 446.78 343.43 272.91 292.98 358.35 158.41 203.41 TRUE FALSE 258.6731794 331.9548785 389.357009 481.191073 329.7504559 288.3619284 273.4358388 355.2169837 174.8772864 228.6099665 1.131504384 1.452057772 1.703149758 2.104856059 1.442415049 1.261370765 1.196080132 1.553812326 0.764959153 1 7.83674449 -6.689879183 3.52326075 1.187238334 1.611121884 0.333182551 0.294183257 0.309358144 7.660216732 0.107171976 0.104229642 2.04E-07 6.689879183 0.42388355 LT(ph)PEEEEILNK ddPTM_A459_MK2206_30min_R2 2 LTPEEEEILNK 11 0 P62241;Q5JR95 P62241 RPS8 40S ribosomal protein S8 1 LT(1)PEEEEILNK;LT(1)PEEEEILNK 163.51 0.00012336 0 26507 19828.2 25441 24571 20898 16924.9 25800 20329 15603.8 25645 TRUE FALSE 28536.3963 18843.56042 26289.19024 22563.4707 20077.43952 17568.98893 22412.42901 22986.0701 16960.99032 24808.20575 1.15028054 0.759569661 1.059697364 0.909516429 0.809306393 0.708192648 0.903428053 0.926551091 0.683684684 1 14.59852978 -6.038054288 5.268126979 0.83301858 0.969874623 0.213076452 0.128451113 0.317625408 22.65328159 0.036275602 0.049055412 9.16E-07 6.038054288 0.136856042 LT(ph)PIVHSPLR ddPTM_A459_MK2206_30min_R2 1 LTPIVHSPLR 10 0 Q96KQ4;A0A3B3ISJ2;H0YJL1 Q96KQ4 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 LT(0.953)PIVHS(0.047)PLR 109.44 0.00835 0 8144.5 8119.6 7059.8 8706 7377.2 9395.2 9963.6 7490.2 8193.6 7811.5 TRUE FALSE 8768.049182 7716.392471 7295.170208 7994.691951 7087.534061 9752.74092 8655.367352 8469.194858 8906.264517 7556.611395 1.160314951 1.021144541 0.965402325 1.057973149 0.93792491 1.290623589 1.145403263 1.120766229 1.178605601 1 12.88352372 -6.747849005 24.99995627 1.154522876 1.026266667 0.317889122 0.086436488 263.4212031 484571.5041 0.027708221 0.027563975 1.79E-07 6.747849005 -0.128256209 LT(ph)PVSPESSSTEEK ddPTM_A459_MK2206_30min_R1 2 LTPVSPESSSTEEK 14 0 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 LT(0.998)PVS(0.002)PESSSTEEK;LT(0.994)PVS(0.006)PESSSTEEK 194.77 0.00027057 1633080000 12720.7 12376.1 12628 10264.2 8429.7 7658.7 9301.9 8581 10915.6 11950.8 TRUE FALSE 11638.73767 11570.41364 11770.84654 11054.75046 8093.927199 8092.328975 8681.387223 8505.977222 12050.31568 13431.35533 0.866534864 0.861447959 0.87637072 0.823055469 0.602614331 0.602495339 0.646352286 0.633292547 0.897177938 1 13.71331727 -6.069891355 6.497091995 0.701621742 0.864872167 0.184114389 0.124422246 0.315243677 23.97446783 0.035843908 0.046838927 8.51E-07 6.069891355 0.163250425 LT(ph)PVSPESSSTEEK ddPTM_A459_MK2206_30min_R2 2 LTPVSPESSSTEEK 14 0 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 LT(1)PVSPESSSTEEK;LT(0.999)PVS(0.001)PESSSTEEK 100.73 0.020552 152019000 28973 17914.6 24895 19376.3 22390.9 17312.1 26153 18427.8 14988.3 26726 TRUE FALSE 31191.19516 17024.98701 25724.98687 17793.19431 21511.72076 17970.9241 22719.07968 20836.37673 16291.95524 25853.93281 1.206439089 0.658506663 0.995012522 0.688220026 0.832048297 0.695094407 0.878747533 0.805926777 0.630153848 1 14.65809613 -4.749394198 24.91397782 0.795193123 1.206440064 0.487333861 0.125583723 428.367026 885967.7726 0.028563786 0.468101151 1.78E-05 4.749394198 0.411246941 LT(ph)SDEEGEPSGK ddPTM_A459_MK2206_30min_R1 1 LTSDEEGEPSGK 12 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 LT(0.616)S(0.384)DEEGEPSGK 140.01 0.0025975 27467000 5176.5 5128.9 4772.7 4103.5 4823.2 4039.9 4702.4 4151.9 5669.3 6491.3 TRUE FALSE 4736.211492 4795.007678 4448.742422 4419.552281 4631.081731 4268.635647 4388.711476 4115.600376 6258.644023 7295.491251 0.649197063 0.657256313 0.609793401 0.60579228 0.634786825 0.585105992 0.601564902 0.5641293 0.857878354 1 12.83278941 -8.441414104 3.502935524 0.99711239 0.614304379 0.952573411 0.028928286 0.042956956 1.003637516 0.029813283 0.007895067 3.62E-09 8.441414104 -0.382808011 LT(ph)SDEEGEPSGK ddPTM_A459_MK2206_30min_R2 3 LTSDEEGEPSGK 12 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 LT(0.925)S(0.075)DEEGEPSGK;LT(0.664)S(0.336)DEEGEPSGK;LT(0.5)S(0.5)DEEGEPSGK 198.97 0.00024296 92262000 484200 387680 402908 414400 369430 281790 453350 369336 280620 445690 TRUE FALSE 521270.7243 368428.3749 416340.7516 380542.1944 354924.322 292513.7159 393824.6004 417609.4833 305027.8204 431147.1718 1.209031993 0.854530423 0.965658083 0.882627138 0.823209208 0.678454447 0.913434266 0.968600772 0.707479581 1 18.71782089 -2.517942228 1.374095879 0.855287338 199.971377 0.487230934 0.103549586 689.6620668 3.064388464 0.029700127 431034.7306 0.003034295 2.517942228 199.1160896 LT(ph)SPVTSISPIQASEK ddPTM_A459_MK2206_30min_R2 1 LTSPVTSISPIQASEK 16 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4 Q7Z589 EMSY;C11orf30 Protein EMSY 1 LT(0.575)S(0.424)PVTSISPIQASEK 112.96 0.0055076 5003900 23883 25603 20700 24342 28434 25990 29189 18771 22708 26084 TRUE FALSE 25711.50084 24331.59225 21390.12767 22353.18073 27317.53829 26979.06766 25356.44924 21224.43415 24683.10079 25232.88122 1.018968093 0.964281171 0.847708491 0.885875083 1.082616688 1.069202816 1.004897103 0.84114192 0.978211746 1 14.62301733 -4.766473223 6.95366967 0.960947265 1.020115089 0.040710145 0.07943146 0.436908986 120.4225582 0.021716734 0.122579028 1.71E-05 4.766473223 0.059167824 LT(ph)SQSEAMALQSIR ddPTM_A459_MK2206_30min_R2 1 LTSQSEAMALQSIR 14 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C0A7 E7EUN2 AGAP1 "Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1" 1 LT(0.865)S(0.135)QSEAMALQSIR 110.22 0.010104 2057000 16425 21403 15792 17566 15791 14556 13575 13694 13651 15647 TRUE FALSE 17682.51063 20340.15814 16318.4974 16130.80161 15170.966 15109.93878 11792.58619 15483.85282 14838.3393 15136.43967 1.168208047 1.343787481 1.078093512 1.065693251 1.002281007 0.998249199 0.779085865 1.022952105 0.98030578 1 13.88573828 -5.712060552 1.226546999 0.952235802 1.263961747 0.643993711 0.081675689 0.3082401 0.898407242 0.028410422 0.079795903 1.94E-06 5.712060552 0.311725945 LT(ph)TASQTNIK ddPTM_A459_MK2206_30min_R2 1 LTTASQTNIK 10 0 H7C2B1;Q9UMY1-2;Q9UMY1 H7C2B1 NOL7 Nucleolar protein 7 1 LT(0.704)T(0.046)AS(0.248)QT(0.002)NIK 135.1 0.0046823 3547400 14091 18150 13583 15563 15001 12342 17011 11624 13642 14069 TRUE FALSE 15169.81779 17248.69739 14035.85044 14291.45312 14411.98537 12811.68346 14777.43527 13143.29671 14828.5565 13609.92968 1.114613973 1.267361243 1.031294854 1.050075456 1.058931655 0.941348248 1.085783366 0.965713785 1.089539538 1 13.73237199 -5.281124037 23.67540304 1.027496877 1.190987584 0.567785906 0.056938257 228.6096787 274956.6336 0.013717091 0.028633121 5.23E-06 5.281124037 0.163490707 LTANETQS(ph)ASSTLQK ddPTM_A459_MK2206_30min_R2 2 LTANETQSASSTLQK 15 0 O95819-6;E7EN19 O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 LTANET(0.011)QS(0.896)AS(0.083)S(0.008)T(0.001)LQK;LTANET(0.247)QS(0.729)AS(0.018)S(0.003)T(0.002)LQK 159.64 0.00013585 6269600 26010 28348 21130 20409.5 20630.1 17245.3 21339 15034.7 16289.3 18306.8 TRUE FALSE 28001.3456 26940.27954 21834.46365 18741.97856 19820.05862 17901.58198 18537.16367 16999.78691 17706.11387 17709.45062 1.581152697 1.521237453 1.232927217 1.058303782 1.119179756 1.010849086 1.046738494 0.959927402 0.999811584 1 14.11223184 -5.361274551 1.35129327 1.017147237 1.639058968 0.966531153 0.038854342 0.094804629 0.286637721 0.012693962 0.060275693 4.35E-06 5.361274551 0.621911732 LTANETQSAS(ph)STLQK ddPTM_A459_MK2206_30min_R1 1 LTANETQSASSTLQK 15 0 O95819-6;E7EN19 O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 LT(0.023)ANET(0.023)QS(0.005)AS(0.939)S(0.005)T(0.005)LQK 84.507 0.021677 1855100 344.95 309.55 316.08 266.01 309 177.61 333.07 285.29 300.78 336.89 TRUE FALSE 315.6101911 289.3982387 294.6253702 286.4981363 296.6918757 187.6661247 310.851508 282.7957396 332.0471574 378.6264766 0.833566089 0.764337036 0.778142545 0.756677501 0.783600445 0.495649766 0.82099781 0.746899008 0.876978177 1 8.564631489 -8.5004949 1.905004846 0.999943613 0.742096315 0.45345883 0.088956554 0.313868232 2.562804891 0.085871696 0.02426636 3.16E-09 8.5004949 -0.257847298 LTASEQAHPQEPAESAHEPRLS(ph)AEYEK ddPTM_A459_MK2206_30min_R1 1 LTASEQAHPQEPAESAHEPRLSAEYEK 27 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 LTASEQAHPQEPAES(0.322)AHEPRLS(0.485)AEY(0.193)EK 90.978 1.08E-05 71052000 2730.2 1248.2 1619.1 1166.6 2884.4 2876.3 3240.2 2133.8 1985.5 1966.8 TRUE FALSE 2497.982153 1166.941953 1509.200003 1256.451734 2769.50824 3039.15362 3024.05217 2115.144412 2191.89983 2210.462033 1.130072409 0.527917664 0.68275319 0.568411362 1.252909211 1.374895192 1.368063385 0.95687887 0.991602569 1 11.11013224 -6.266326124 24.98625372 1.176644268 0.709866762 0.50843065 0.206379408 328.249664 1678360.133 0.06564542 0.076799296 5.42E-07 6.266326124 -0.466777506 LTAT(ph)PTPLGGMTGFHMQTEDR ddPTM_A459_MK2206_30min_R2 1 LTATPTPLGGMTGFHMQTEDR 21 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LT(0.214)AT(0.755)PT(0.031)PLGGMTGFHMQTEDR 161.55 1.05E-07 3281600 8582.4 10172 9934.8 9455.9 9981.4 9980.2 11094 8302.4 9239 10066 TRUE FALSE 9239.475143 9666.873271 10266.02127 8683.322722 9589.480083 10360.0035 9637.344474 9387.552186 10042.59152 9737.547244 0.948850353 0.992742118 1.054271781 0.891736133 0.984794204 1.063923311 0.98970965 0.964057165 1.031326603 1 13.24934271 -6.536642168 24.99745618 1.008307472 0.974146578 0.137572293 0.044936853 555.3380106 1008610.094 0.015124814 0.015130841 2.91E-07 6.536642168 -0.034160894 LTDSS(ph)PSSTSTSNSQR ddPTM_A459_MK2206_30min_R2 2 LTDSSPSSTSTSNSQR 16 0 Q5VT06 Q5VT06 CEP350 Centrosome-associated protein 350 1 LTDS(0.042)S(0.713)PS(0.03)S(0.03)T(0.055)S(0.055)T(0.055)S(0.016)NS(0.005)QR;LTDS(0.071)S(0.924)PS(0.002)S(0.002)T(0.001)STSNSQR 113.52 0.0024769 3001200 17188.4 21771 17053.2 17348.3 21311.3 18220.8 18245 13080.5 17348.2 17636.4 TRUE FALSE 18504.35712 20689.8838 17621.74518 15930.8884 20474.51128 18914.20531 15849.40958 14790.16626 18857.11508 17060.92571 1.084604519 1.212705814 1.032871573 0.933764595 1.200082084 1.108627142 0.92898884 0.866902917 1.105280885 1 14.05840831 -7.255430851 24.39419488 0.964201735 1.095335971 0.282049461 0.093240663 449.2747875 1824028.822 0.037250919 0.028066158 5.55E-08 7.255430851 0.131134236 LTEDLEYHELLDR ddPTM_A459_MK2206_30min_R1 2 LTEDLEYHELLDR 13 0 P22059;H0YCV6 P22059 OSBP Oxysterol-binding protein 1 0 ; 139.48 0.0013105 6001500 6113.2 6080.2 5854.2 5363.6 6129.6 5845.7 5949.2 5388.2 4994.6 5910.5 FALSE TRUE 5593.240238 5684.377875 5456.833215 5776.705401 5885.445052 6176.678482 5552.339723 5341.091535 5513.806543 6642.737362 0.842008337 0.855728228 0.821473576 0.869627247 0.885996952 0.929839334 0.835851159 0.804049783 0.830050361 1 12.69756216 -11.7524779 2.374589582 1.513376568 0.853718859 0.626784999 0.034083253 3576382.222 888279.4545 9821090.984 0.009669014 1.77E-12 11.7524779 -0.65965771 LTEGCS(ph)FR ddPTM_A459_MK2206_30min_R1 2 LTEGCSFR 8 0 H0YMV8;Q71UM5;C9J1C5;P42677 H0YMV8;P42677 RPS27L;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like 1 LTEGCS(1)FR;LTEGCS(1)FR 114.86 0.0068763 25497000 11513.6 10492.7 16253.2 8346.3 11915.7 11999.7 8490.2 9452.6 9399 6839.6 TRUE FALSE 10534.30786 9809.623323 15149.97807 8989.133472 11441.07244 12679.11264 7923.834249 9369.956915 10376.05968 7686.941284 1.370416069 1.27614131 1.970872094 1.169403166 1.488377758 1.649435344 1.030817585 1.218944775 1.349829445 1 12.90819393 -7.264371823 24.99900947 1.168143348 1.485396889 0.35141072 0.224094941 324.3583887 2765125.25 0.089881402 0.063614952 5.44E-08 7.264371823 0.317253542 LTEGCS(ph)FR ddPTM_A459_MK2206_30min_R2 1 LTEGCSFR 8 0 H0YMV8;Q71UM5;C9J1C5;P42677 H0YMV8;P42677 RPS27L;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like 1 LTEGCS(1)FR 106.2 0.013829 58571000 113190 149170 135750 152730 113280 155030 180560 185780 172730 92657 TRUE FALSE 121855.9134 141762.4347 140275.8372 140251.4704 108832.058 160929.7753 156852.2551 210062.0839 187753.7432 89633.60968 1.359489079 1.581576768 1.5649915 1.564719651 1.214188053 1.795417766 1.749926793 2.343563811 2.094680152 1 16.45175218 -6.928413079 7.021870146 1.89030076 1.476188157 0.177104105 0.341901955 0.312343411 25.19704208 0.117671521 0.103618217 1.18E-07 6.928413079 -0.414112602 LTEVPVEPVLTVHPES(ph)K ddPTM_A459_MK2206_30min_R2 1 LTEVPVEPVLTVHPESK 17 0 Q9H307 Q9H307 PNN Pinin 1 LTEVPVEPVLT(0.009)VHPES(0.991)K 88.768 0.013355 0 7429.4 8483.4 7113.7 7876 6278 5979.1 8520.7 5203.9 5512.7 7124.4 TRUE FALSE 7998.200576 8062.126692 7350.867208 7232.505606 6031.494176 6206.63884 7401.921855 5884.067598 5992.184681 6891.931411 1.160516566 1.169792067 1.066590302 1.049416364 0.87515296 0.900565962 1.073998189 0.853761775 0.869449262 1 12.75069263 -5.78175382 1.580107314 0.927927131 1.164291059 0.660131038 0.066677762 0.239732664 1.214612476 0.022164282 0.04797612 1.65E-06 5.78175382 0.236363928 LTFDSS(ph)FSPNTGK ddPTM_A459_MK2206_30min_R2 1 LTFDSSFSPNTGK 13 0 C9JI87;P21796 C9JI87 VDAC1 Voltage-dependent anion-selective channel protein 1 1 LTFDS(0.121)S(0.837)FS(0.041)PNTGK 78.964 0.04004 13747000 104620 54168 61781 51408 37489 58495 109010 46770 71367 67145 TRUE FALSE 112629.7876 51478.09589 63840.7477 47207.80195 36016.99349 60721.06821 94696.85606 52882.99959 77574.37266 64954.06415 1.733991385 0.792530792 0.982859942 0.726787501 0.55449946 0.93483093 1.457905018 0.81415998 1.194295902 1 15.98713218 -7.041362479 24.98198528 1.114712765 0.918175516 0.048962132 0.328940913 1465.900629 885365.7751 0.125940705 0.097564833 9.09E-08 7.041362479 -0.196537249 LTFDSSFS(ph)PNTGK ddPTM_A459_MK2206_30min_R1 1 LTFDSSFSPNTGK 13 0 C9JI87;P21796 C9JI87 VDAC1 Voltage-dependent anion-selective channel protein 1 1 LTFDS(0.003)S(0.01)FS(0.986)PNTGK 183.06 0.00011949 26548000 2725.4 2775.1 1715.1 1935.5 2851.9 2562.3 2783.1 2344.6 3378.6 3483.9 TRUE FALSE 2493.590418 2594.440486 1598.683791 2084.572545 2738.302784 2707.375212 2597.444477 2324.101409 3729.81756 3915.511834 0.636849159 0.662605707 0.408294971 0.532388263 0.69934734 0.691448609 0.663372909 0.593562606 0.952574713 1 11.93498519 -8.291434072 5.12110405 0.98924623 0.610120956 0.756680688 0.082917608 0.102311143 7.344118527 0.082569451 0.023122663 5.11E-09 8.291434072 -0.379125274 LTFDSSFS(ph)PNTGKK ddPTM_A459_MK2206_30min_R1 1 LTFDSSFSPNTGKK 14 1 C9JI87;P21796 C9JI87 VDAC1 Voltage-dependent anion-selective channel protein 1 1 LTFDS(0.085)S(0.191)FS(0.716)PNT(0.008)GKK 93.106 0.026681 24655000 6718.8 6247.9 4596.6 5440.9 6553.2 4726.4 6094 5994.7 6432.2 5529 TRUE FALSE 6147.330778 5841.160574 4284.595599 5859.959061 6292.172167 4994.004684 5687.480379 5942.28897 7100.850208 6213.974262 0.989275224 0.940003986 0.689509711 0.943029181 1.012584202 0.803673217 0.9152726 0.956278336 1.142722823 1 12.60130055 -8.038997318 3.898080407 1.070516035 0.896198741 0.342026881 0.094109127 0.256473072 8.109204863 0.068317533 0.025214385 9.14E-09 8.038997318 -0.174317294 LTFDTTFS(ph)PNTGK ddPTM_A459_MK2206_30min_R1 2 LTFDTTFSPNTGK 13 0 Q5JSD2;Q5JSD1;A0A0A0MR02;P45880-2;P45880;P45880-1 Q5JSD2 VDAC2 Voltage-dependent anion-selective channel protein 2 1 LTFDT(0.004)T(0.038)FS(0.821)PNT(0.137)GK;LTFDTT(0.003)FS(0.996)PNTGK 209.11 8.84E-06 31274000 4967.1 3953.1 3099.1 3672.3 5099.6 4118.7 5572.6 3880.8 6206.3 5932.1 TRUE FALSE 4544.622062 3695.752471 2888.741727 3955.141182 4896.472133 4351.897235 5200.862022 3846.870575 6851.467094 6667.013333 0.681657863 0.554334045 0.433288728 0.593240329 0.73443263 0.652750642 0.780088739 0.577000582 1.027666626 1 12.7028249 -8.079901854 0.547017591 1.024066583 0.56472208 0.620622305 0.111260589 0.54819708 0.392059621 0.113995576 0.061952901 8.32E-09 8.079901854 -0.459344503 LTFDTTFS(ph)PNTGK ddPTM_A459_MK2206_30min_R2 2 LTFDTTFSPNTGK 13 0 Q5JSD2;Q5JSD1;A0A0A0MR02;P45880-2;P45880;P45880-1 Q5JSD2 VDAC2 Voltage-dependent anion-selective channel protein 2 1 LTFDT(0.002)T(0.002)FS(0.969)PNT(0.026)GK;LTFDT(0.001)T(0.026)FS(0.962)PNT(0.011)GK 170.74 0.00021987 14005100 125705 56358 60987 61988 47008 70795 113814 48106 68653 67950 TRUE FALSE 135329.0715 53559.34367 63020.27614 56923.38211 45162.22972 73489.15333 98870.08508 54393.61937 74624.31384 65732.79706 2.058775489 0.814803965 0.958734132 0.865981438 0.687057782 1.117998269 1.50412107 0.827495889 1.135267586 1 16.00432576 -4.755673027 24.99999913 0.990492758 2.058777206 0.687506084 0.216134478 114.0308533 494330.2706 0.056531023 0.490595338 1.76E-05 4.755673027 1.068284449 LTFDTTFS(ph)PNTGKK ddPTM_A459_MK2206_30min_R1 1 LTFDTTFSPNTGKK 14 1 Q5JSD2;Q5JSD1;A0A0A0MR02;P45880-2;P45880;P45880-1 Q5JSD2 VDAC2 Voltage-dependent anion-selective channel protein 2 1 LTFDT(0.005)T(0.019)FS(0.952)PNT(0.023)GKK 67.902 0.033334 33103000 4289.7 3872.9 2763.7 3942 4639.9 3606.3 4901.9 4485.6 4942.5 4065.8 TRUE FALSE 3924.838489 3620.773506 2576.107744 4245.613523 4455.082958 3810.485589 4574.903195 4446.382872 5456.290562 4569.501999 0.858920401 0.792378142 0.563761159 0.929119524 0.974960282 0.833895158 1.00118201 0.973056336 1.194066785 1 12.15782123 -6.83468567 0.703505476 1.071669921 0.755101651 0.511210098 0.110042481 0.607776542 0.653003684 0.085963224 0.081259881 1.46E-07 6.83468567 -0.316568271 LTFDTTFS(ph)PNTGKK ddPTM_A459_MK2206_30min_R2 1 LTFDTTFSPNTGKK 14 1 Q5JSD2;Q5JSD1;A0A0A0MR02;P45880-2;P45880;P45880-1 Q5JSD2 VDAC2 Voltage-dependent anion-selective channel protein 2 1 LTFDT(0.003)T(0.347)FS(0.649)PNTGKK 75.143 0.023049 14576000 55366 39516 37032 31197 28585 38187 72117 26071 53875 43174 TRUE FALSE 59604.86353 37553.6929 38266.6284 28648.10531 27462.60927 39640.23304 62647.95127 29478.56922 58560.95012 41765.23592 1.427140592 0.899161517 0.916231587 0.685931844 0.657547088 0.949120295 1.500002332 0.705815939 1.4021458 1 15.35001497 -7.021849212 24.57782564 1.141345065 0.893301482 0.135520043 0.281148134 1241.430843 1396461.95 0.105497687 0.082513961 9.51E-08 7.021849212 -0.248043582 LTGDILVQILFLTLLMTAIYS(ph)AKNS(ph)NR ddPTM_A459_MK2206_30min_R1 1 LTGDILVQILFLTLLMTAIYSAKNSNR 27 1 Q7Z443 Q7Z443 PKD1L3 Polycystic kidney disease protein 1-like 3 2 LT(0.001)GDILVQILFLT(0.007)LLMT(0.249)AIY(0.287)S(0.728)AKNS(0.728)NR 41.209 0.035693 8800600 1941.9 3230.4 3034.6 3227.5 1497.8 1804 1684.3 1882.6 2001.3 2313.8 TRUE FALSE 1776.731208 3020.100373 2828.619807 3476.082609 1438.139454 1906.140921 1571.94342 1866.140627 2209.342297 2600.451012 0.683239638 1.161375607 1.087742008 1.336722973 0.553034627 0.733003972 0.604488765 0.717621912 0.84959966 1 11.34454615 -6.270773087 24.99958748 0.721418074 1.07545417 0.405347107 0.191269366 614.8532152 1646832.086 0.05791122 0.066545641 5.36E-07 6.270773087 0.354036095 LTGS(ph)PGVK ddPTM_A459_MK2206_30min_R2 2 LTGSPGVK 8 0 H7C5W6;F5H619;Q86XA9-2;Q86XA9 H7C5W6 HEATR5A HEAT repeat-containing protein 5A 1 LT(0.065)GS(0.935)PGVK;LT(0.019)GS(0.981)PGVK 96.342 0.021156 13830600 77480 85753 92675 85557 83986 74120 95194 68104 79242 93235 TRUE FALSE 83411.92837 81494.63072 95764.73825 78566.71942 80688.28764 76940.68854 82694.91345 77005.42664 86134.32592 90192.74959 0.924818555 0.903560775 1.061778676 0.871097952 0.894620554 0.853069553 0.916868749 0.853787328 0.955002773 1 16.46072384 -4.367067462 17.3372035 0.917910613 4.400757677 0 0.063300497 2045.176375 225497.1383 0.015255541 2584.636079 4.29E-05 4.367067462 3.482847064 LTGS(ph)TSSLNK ddPTM_A459_MK2206_30min_R1 2 LTGSTSSLNK 10 0 Q9NV70-2;Q9NV70 Q9NV70-2 EXOC1 Exocyst complex component 1 1 LTGS(0.385)T(0.279)S(0.093)S(0.244)LNK;LTGS(0.731)T(0.242)S(0.021)S(0.005)LNK 157.97 0.00048319 47496000 8100.4 7817.6 7465.1 6671.8 6598.6 6518.3 7063.1 7542 6644.6 6600.5 TRUE FALSE 7411.418443 7308.672819 6958.389811 7185.663192 6335.763789 6887.360513 6591.933486 7476.061089 7335.329948 7418.219771 0.999083159 0.985232717 0.938013435 0.968650622 0.854081435 0.928438456 0.888613938 1.007797197 0.988826184 1 12.85685729 -7.787548363 24.98149807 0.998733819 0.936952218 0.322346231 0.040811434 298.8062416 285898.2209 0.023960607 0.011516146 1.63E-08 7.787548363 -0.061781601 LTGS(ph)TSSLNK ddPTM_A459_MK2206_30min_R2 4 LTGSTSSLNK 10 0 Q9NV70-2;Q9NV70 Q9NV70-2 EXOC1 Exocyst complex component 1 1 LT(0.001)GS(0.847)T(0.101)S(0.041)S(0.011)LNK;LTGS(0.261)T(0.246)S(0.246)S(0.246)LNK;LTGS(0.587)T(0.241)S(0.086)S(0.086)LNK;LT(0.004)GS(0.939)T(0.036)S(0.015)S(0.007)LNK 134.75 0.002048 46910000 127573 138107 124657 142521 131882 117237 149672 113481 118023 134470 TRUE FALSE 137340.087 131248.8072 128813.0022 130876.5784 126703.65 121698.5362 130019.8866 128313.3563 128288.4272 130082.2549 1.055794175 1.008967805 0.990242691 1.006106317 0.974027165 0.935550635 0.999520547 0.986401692 0.986210051 1 16.98906465 -3.673904116 0.849303859 0.980808184 1.449615866 0.585837496 0.018431493 9.308918399 1.239609809 0.006702718 6.318301562 0.000211883 3.673904116 0.468807681 LTGST(ph)SSLNK ddPTM_A459_MK2206_30min_R1 2 LTGSTSSLNK 10 0 Q9NV70-2;Q9NV70 Q9NV70-2 EXOC1 Exocyst complex component 1 1 LTGS(0.001)T(0.612)S(0.306)S(0.082)LNK;LTGS(0.003)T(0.41)S(0.41)S(0.177)LNK 172.21 0.00035325 35098800 10592 9205 9890.9 7868.1 8654.4 6467.7 8331.1 8538.6 9203.8 7442.1 TRUE FALSE 9691.094779 8605.752827 9219.533266 8474.102425 8309.676922 6833.895585 7775.34752 8463.94792 10160.56795 8364.083533 1.158655905 1.028893697 1.102276565 1.01315373 0.99349521 0.817052527 0.929611414 1.011939669 1.214785566 1 13.02999176 -5.88997917 3.246165952 0.983859515 1.09064117 0.176259364 0.09694758 0.450052276 9.390086119 0.030424755 0.048066894 1.29E-06 5.88997917 0.106781654 LTGST(ph)SSLNK ddPTM_A459_MK2206_30min_R2 1 LTGSTSSLNK 10 0 Q9NV70-2;Q9NV70 Q9NV70-2 EXOC1 Exocyst complex component 1 1 LTGS(0.003)T(0.442)S(0.442)S(0.113)LNK 172.21 0.00035325 44863000 300090 291950 271480 306120 266680 220960 349580 257190 233780 262980 TRUE FALSE 323065.1211 277452.1875 280531.0077 281109.0168 256208.8032 229368.7876 303679.7261 290805.6161 254113.7618 254398.9841 1.269915138 1.0906183 1.102720629 1.104992686 1.007114097 0.90161047 1.193714382 1.143108401 0.998878839 1 17.95673338 LTGSTSS(ph)LNK ddPTM_A459_MK2206_30min_R2 1 LTGSTSSLNK 10 0 Q9NV70-2;Q9NV70 Q9NV70-2 EXOC1 Exocyst complex component 1 1 LTGS(0.039)T(0.191)S(0.111)S(0.659)LNK 139.76 0.0014922 43787000 301800 309480 291180 291950 274090 236660 341820 269580 243210 311760 TRUE FALSE 324906.04 294111.6732 300887.7959 268096.7511 263327.8494 245666.2621 296938.6234 304815.0316 264363.9662 301587.2967 1.077320045 0.975212406 0.997680602 0.8889524 0.873139725 0.814577619 0.984585978 1.010702489 0.87657527 1 18.20221614 -4.841388857 1.243398792 0.921074556 1.126372665 0.347625513 0.062493543 1.578691228 2.271013946 0.02014113 0.407604304 1.44E-05 4.841388857 0.20529811 LTIFGNSAVSQPAS(ph)SSNHSSR ddPTM_A459_MK2206_30min_R2 1 LTIFGNSAVSQPASSSNHSSR 21 0 P46934-3;P46934-2;P46934;H0Y8X6;P46934-4 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 LTIFGNSAVSQPAS(0.431)S(0.107)S(0.078)NHS(0.223)S(0.162)R 77.169 0.0017621 5359000 17394 29024 23632 51822 49190 67502 42243 21892 51072 28639 TRUE FALSE 18725.69801 27582.71036 24419.87909 47587.97683 47258.55344 70070.83591 36696.44336 24753.35957 55514.15024 27704.51178 0.675907887 0.995603553 0.881440513 1.717697724 1.70580712 2.529221106 1.324565603 0.893477559 2.003794569 1 14.75783332 -5.756225627 24.24866605 1.624031801 0.865445571 0.36208933 0.452213968 98.8078308 459535.467 0.128050181 0.213314817 1.75E-06 5.756225627 -0.75858623 LTIFGNSAVSQPASSS(ph)NHSSR ddPTM_A459_MK2206_30min_R1 1 LTIFGNSAVSQPASSSNHSSR 21 0 P46934-3;P46934-2;P46934;H0Y8X6;P46934-4 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 LTIFGNSAVS(0.001)QPAS(0.134)S(0.134)S(0.348)NHS(0.23)S(0.154)R 86.084 0.0040971 0 2429.2 1246.9 1415.5 1229.5 3878.3 3520.8 2932.4 1987.8 1071 1213.2 TRUE FALSE 2222.583784 1165.726583 1319.419804 1324.196303 3723.819099 3720.144653 2736.784946 1970.420874 1182.334283 1363.500375 1.630057332 0.854951421 0.967671024 0.971174139 2.731073028 2.728378166 2.007175793 1.445119422 0.867131615 1 10.41309938 -6.201672553 24.99857696 1.875868431 1.078155264 0.223951489 0.618360631 367.543502 153731.336 0.196429973 0.253589946 6.29E-07 6.201672553 -0.797713167 LTIFGNSAVSQPASSSNHS(ph)SR ddPTM_A459_MK2206_30min_R1 1 LTIFGNSAVSQPASSSNHSSR 21 0 P46934-3;P46934-2;P46934;H0Y8X6;P46934-4 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 LTIFGNSAVSQPAS(0.085)S(0.085)S(0.23)NHS(0.37)S(0.23)R 104.77 0.00010037 6877500 2006.9 1208.2 1303.6 809.63 2715 2541.2 2470.3 1753.5 931.82 851.58 TRUE FALSE 1836.202616 1129.54596 1215.115264 871.9878429 2606.855801 2685.080548 2305.510794 1738.169334 1028.686024 957.0801595 1.918546318 1.180199954 1.269606576 0.911091756 2.723759107 2.805491809 2.408900416 1.816116777 1.074816998 1 9.902495951 -2.791516731 17.7044439 1.762243209 1.7140543 0 0.694108964 0 0 0.173069348 0 0.001616156 2.791516731 -0.048188909 LTIFGNSAVSQPASSSNHS(ph)SR ddPTM_A459_MK2206_30min_R2 1 LTIFGNSAVSQPASSSNHSSR 21 0 P46934-3;P46934-2;P46934;H0Y8X6;P46934-4 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 LTIFGNSAVSQPAS(0.001)S(0.004)S(0.012)NHS(0.492)S(0.492)R 134.63 2.61E-05 6628300 6374.3 20676 12389 31562 31709 40588 20126 16971 31754 11858 TRUE FALSE 6862.321309 19649.25991 12802.04308 28983.28364 30463.94534 42132.60478 17483.43202 19189.16797 34515.90552 11471.07443 0.598228296 1.712939797 1.116028246 2.526640709 2.655718566 3.672943196 1.524132036 1.672830918 3.008951405 1 13.48571291 -5.759036574 24.99912506 2.362886527 1.199452624 0.316931787 0.769120268 75.48458666 785331.0623 0.212162429 0.346360488 1.74E-06 5.759036574 -1.163433903 LTLNS(ph)PIFDKPLSR ddPTM_A459_MK2206_30min_R2 2 LTLNSPIFDKPLSR 14 1 E5RJM2;E5RGN0;Q00536;Q00536-3;Q00536-2;A0A087WZU2;E5RIY8;H0YBX5;E5RIU4 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 LT(0.055)LNS(0.945)PIFDKPLSR;LT(0.074)LNS(0.925)PIFDKPLSR 84.895 0.013909 95284000 178338 189768 198670 256665 231296 223221 246514 213072 193660 259318 TRUE FALSE 191991.6944 180344.3971 205293.5586 235694.6485 222214.1569 231715.8316 214146.4157 240921.242 210504.1967 250856.4749 0.765344783 0.718914659 0.818370579 0.939559756 0.885821891 0.923698827 0.853661106 0.960394752 0.839141971 1 17.93650265 -5.544405689 3.732656826 0.909267514 0.744600983 0.690189709 0.046803098 0.112789352 3.403034137 0.011841557 0.02340952 2.85E-06 5.544405689 -0.164666531 LTLPHSIR ddPTM_A459_MK2206_30min_R2 1 LTLPHSIR 8 0 O76021;J3QSV6;I3L234;I3L3C4;I3L3U9 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 0 90.601 0.047204 0 14366 21970 15434 19505 20009 21731 19298 14862 17871 16677 FALSE TRUE 15465.87201 20879.00175 15948.56186 17911.37911 19223.34612 22557.98843 16764.14942 16804.51443 19425.38728 16132.83086 0.958658288 1.294193309 0.988578012 1.110244028 1.19156683 1.398265973 1.039132535 1.041634576 1.204090432 1 13.97771199 -11.07663919 3.026620656 0.993783889 1.139491389 0.087284151 0.131818276 79999287.35 69678923.53 3912672.059 0.032565636 8.38E-12 11.07663919 0.1457075 LTLYDIAHTPGVAADLSHIETK ddPTM_A459_MK2206_30min_R1 1 LTLYDIAHTPGVAADLSHIETK 22 0 P40926;P40926-2 P40926 MDH2 "Malate dehydrogenase, mitochondrial" 0 158.5 2.71E-09 9631300 7368.1 7337.7 6395.2 6491.6 6658.6 6836.9 6431.3 6692.8 5659.6 5829.8 FALSE TRUE 6741.404404 6860.014396 5961.111642 6991.584157 6393.373862 7223.99937 6002.279712 6634.285555 6247.935673 6552.039637 1.028901652 1.04700441 0.90981007 1.067085144 0.975783758 1.102557336 0.916093315 1.01255272 0.953586367 1 12.67772837 -7.28723671 24.99982149 0.971604177 1.017868685 0.17210165 0.054682776 1530.825225 1483493.951 0.021832855 0.014723961 5.16E-08 7.28723671 0.046264508 LTPAEEENNS(ph)FQRLSP ddPTM_A459_MK2206_30min_R2 1 LTPAEEENNSFQRLSP 16 1 Q5HYI7-5;Q5HYI7 Q5HYI7-5 MTX3 Metaxin-3 1 LTPAEEENNS(0.504)FQRLS(0.496)P 95.822 0.040298 7338500 24317 35017 29248 29905 33752 37024 34686 26567 33940 26380 TRUE FALSE 26178.72822 33278.1067 30223.11372 27461.66584 32426.72689 38432.97426 30131.68653 30039.39812 36892.03985 25519.22276 1.025843477 1.304040762 1.18432736 1.076116859 1.270678468 1.506040157 1.180744681 1.177128253 1.445656876 1 14.63929677 -4.75176719 24.99437364 1.244663626 1.02584304 0.158674728 0.146107439 740.655867 1913830.779 0.03591116 0.459190609 1.77E-05 4.75176719 -0.218820586 LTPAEEENNSFQRLS(ph)P ddPTM_A459_MK2206_30min_R2 1 LTPAEEENNSFQRLSP 16 1 Q5HYI7-5;Q5HYI7 Q5HYI7-5 MTX3 Metaxin-3 1 LTPAEEENNS(0.092)FQRLS(0.908)P 112.12 0.011878 7327000 23027 35338 26336 29629 34398 36769 27910 23229 25635 22724 TRUE FALSE 24789.96482 33583.16631 27214.0291 27208.21592 33047.36168 38168.27006 24245.38347 26265.11006 27864.68596 21982.51774 1.127712718 1.52772156 1.237985085 1.23772064 1.503347436 1.736301115 1.102939334 1.194818099 1.267583918 1 14.42406901 -8.24297074 0.987934427 1.036352259 1.374939711 0.244309616 0.186751307 0.753136788 1.509937571 0.181392072 0.063388004 5.72E-09 8.24297074 0.338587452 LTPEEEEILNK ddPTM_A459_MK2206_30min_R1 1 LTPEEEEILNK 11 0 P62241;Q5JR95 P62241 RPS8 40S ribosomal protein S8 0 167.93 0.0070407 6068000 1335.3 1285.2 1218.5 1404.5 1311.3 1233.7 1321.2 1231.1 1019.4 754.3 FALSE TRUE 1221.725723 1201.533246 1135.791615 1512.674833 1259.068144 1303.551028 1233.065159 1220.336622 1125.370278 847.7483787 1.441141916 1.417322966 1.339774447 1.784344118 1.485190861 1.537662661 1.454517861 1.43950334 1.327481487 1 9.72749231 -8.746100033 1.120779435 1.000206691 1.500179667 0.652099869 0.109427523 0.530428758 1.284017438 0.10809958 0.033914395 1.79E-09 8.746100033 0.499972976 LTPEEEEILNK ddPTM_A459_MK2206_30min_R2 1 LTPEEEEILNK 11 0 P62241;Q5JR95 P62241 RPS8 40S ribosomal protein S8 0 138.08 0.017733 1758400 8622.6 14256 10742 15425 15132 10546 12388 11187 10309 12337 FALSE TRUE 9282.752886 13548.06777 11100.13292 14164.72816 14537.84165 10947.33542 10761.44072 12649.17931 11205.65819 11934.4447 0.777811881 1.135207218 0.930092115 1.186877858 1.21814144 0.917289048 0.901712731 1.059888384 0.938934191 1 13.54284382 LTPEELER ddPTM_A459_MK2206_30min_R2 2 LTPEELER 8 0 Q5H8X8;O95399;O95399-2 Q5H8X8 UTS2 Urotensin-2 0 ; 148.04 0.022485 24100000 44126 53227 52263 59874 55671 58640 59001 46860 49253 52044 FALSE TRUE 47504.32049 50583.82458 54005.42234 54982.10267 53485.07682 60871.58629 51254.09783 52984.76289 53536.93691 50345.80854 0.943560584 1.004727624 1.072689543 1.092088979 1.062354114 1.209069594 1.018041011 1.052416565 1.063384191 1 15.61958405 -5.00512526 2.16050494 1.077200575 0.935503482 0.371082887 0.053076879 0.43483026 3.241494691 0.014378922 0.100342974 9.88E-06 5.00512526 -0.141697094 LTPIHDR ddPTM_A459_MK2206_30min_R1 2 LTPIHDR 7 0 I3L3X7;A0A087X2I4;P28072 I3L3X7 PSMB6 Proteasome subunit beta type;Proteasome subunit beta type-6 0 ; 101.33 0.028093 7166900 11358.1 12622.7 11796.7 10035.7 12142.4 10209.7 13267.7 9866.7 6223.8 12204.1 FALSE TRUE 10392.03395 11800.95994 10995.97287 10808.65135 11658.7425 10787.76439 12382.63594 9780.436482 6870.786282 13716.03604 0.757655777 0.860376854 0.801687371 0.788030253 0.850008155 0.78650744 0.902785316 0.713065819 0.5009309 1 13.74357598 -7.87350355 9.016526534 0.703214383 0.820178595 0.070111308 0.120318496 0.477704525 35.88825231 0.061051899 0.029267227 1.34E-08 7.87350355 0.116964212 LTPIVHS(ph)PLR ddPTM_A459_MK2206_30min_R2 1 LTPIVHSPLR 10 0 Q96KQ4;A0A3B3ISJ2;H0YJL1 Q96KQ4 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 LT(0.018)PIVHS(0.982)PLR 91.712 0.018288 1628000 8129.1 9478.8 8134.7 8736.6 12272 11751 9181.2 7252.3 8508.9 12349 TRUE FALSE 8751.470146 9008.096575 8405.906838 8022.791833 11790.13962 12198.19254 7975.697411 8200.200511 9248.988741 11946.05314 0.732582556 0.754064666 0.70365557 0.671585145 0.986948533 1.021106502 0.667642887 0.686435965 0.774229667 1 13.54424642 -6.219399916 24.9996116 0.839213966 0.717384563 0.244036105 0.119006628 923.6187839 549248.0237 0.038606383 0.049840258 6.03E-07 6.219399916 -0.121829403 LTPPS(ph)PVRSEPQPAVPQELEMPVLK ddPTM_A459_MK2206_30min_R2 2 LTPPSPVRSEPQPAVPQELEMPVLK 25 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 LT(0.044)PPS(0.888)PVRS(0.069)EPQPAVPQELEMPVLK;LTPPS(0.989)PVRS(0.011)EPQPAVPQELEMPVLK 72.916 0.00032851 5655800 11853.6 32608 19577.1 27639 37110 28088 30269 19005.4 32297 19651.9 TRUE FALSE 12761.12073 30988.73414 20229.79074 25380.80529 35652.87494 29156.90852 26294.64394 21489.47104 35106.13468 19010.66011 0.671261316 1.630071442 1.06412879 1.335082798 1.875414884 1.53371363 1.383152599 1.130390576 1.846655217 1 14.21452101 -4.751922429 24.86508865 1.428678533 0.671259705 0.375714207 0.290230914 383.7015813 1002427.359 0.070467077 0.884421974 1.77E-05 4.751922429 -0.757418827 LTPS(ph)PDIIVLSDNEASSPR ddPTM_A459_MK2206_30min_R1 4 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LTPS(1)PDIIVLSDNEASSPR;LT(0.449)PS(0.551)PDIIVLSDNEASSPR;LT(0.001)PS(0.999)PDIIVLSDNEASSPR;LT(0.008)PS(0.992)PDIIVLSDNEASSPR 268.82 1.36E-58 11774400 5081.7 4832.42 4699.41 4183.65 5046.77 3773.51 4828.16 4830.49 4139.46 4077.12 TRUE FALSE 4649.47473 4517.82858 4380.427143 4505.875448 4845.746464 3987.162875 4506.082256 4788.257535 4569.77168 4582.224406 1.014676349 0.985946601 0.955960851 0.983338014 1.057509636 0.870136973 0.983383147 1.044963562 0.997282384 1 12.1618324 -7.574314521 13.25106974 1.015536042 0.976627486 0.110024173 0.04618377 2.700591555 691.3784688 0.021789643 0.012577958 2.66E-08 7.574314521 -0.038908556 LTPS(ph)PDIIVLSDNEASSPR ddPTM_A459_MK2206_30min_R2 3 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LT(0.309)PS(0.686)PDIIVLS(0.005)DNEASSPR;LT(0.001)PS(0.999)PDIIVLSDNEASSPR;LTPS(1)PDIIVLSDNEASSPR 176.68 5.36E-10 5929400 26486 35923.6 33128.1 33237.1 37859.6 34100.6 37863.5 27801.5 27104.3 29143.4 TRUE FALSE 28513.78852 34139.68626 34232.57432 30521.52261 36373.04187 35398.32223 32891.97697 31435.25151 29461.78302 28192.45324 1.011397918 1.210951242 1.214246026 1.082613221 1.290169449 1.25559567 1.166694387 1.115023628 1.045023743 1 14.7830214 -8.156901406 1.839948602 1.00603684 1.182811986 0.392823949 0.076443157 0.358018746 2.166302583 0.070697781 0.021651371 6.97E-09 8.156901406 0.176775146 LTPSPDIIVLS(ph)DNEASSPR ddPTM_A459_MK2206_30min_R1 6 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(0.782)DNEAS(0.165)S(0.054)PR;LTPSPDIIVLS(0.49)DNEAS(0.196)S(0.314)PR 233.38 5.51E-24 38725300 7075.32 7209.19 6941.44 6509.35 8090.61 6901.83 7474.15 6750.77 6268.87 5973.2 TRUE FALSE 6473.52688 6739.870421 6470.274393 7010.701265 7768.343872 7292.60565 6975.563091 6691.74873 6920.54147 6713.205111 0.964297496 1.003972068 0.963813005 1.04431507 1.157173622 1.086307588 1.039080882 0.996803854 1.030884854 1 12.71278601 -5.83014012 6.118015715 1.056587256 0.980196949 0.357890054 0.044608993 0.234438862 15.61264796 0.013905997 0.021005399 1.48E-06 5.83014012 -0.076390307 LTPSPDIIVLS(ph)DNEASSPR ddPTM_A459_MK2206_30min_R2 3 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(0.972)DNEAS(0.006)S(0.021)PR;LTPSPDIIVLS(0.892)DNEAS(0.055)S(0.053)PR 186.89 5.26E-15 0 19162.6 24499.1 22636.2 24406.7 23936.6 25004 26012.7 18708.9 23560.6 21787.9 TRUE FALSE 20629.70339 23282.51032 23390.87961 22412.59454 22996.72881 25955.54474 22597.20124 21154.21747 25609.8584 21076.96261 0.978779712 1.104642578 1.109784177 1.063369279 1.091083627 1.231465142 1.072127975 1.00366537 1.215063996 1 14.36337936 -4.760515372 24.77344398 1.101409445 0.978779561 0.19902809 0.072222775 32.99944461 884205.4338 0.017350674 0.102514292 1.74E-05 4.760515372 -0.122629884 LTPSPDIIVLSDNEAS(ph)SPR ddPTM_A459_MK2206_30min_R2 1 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LTPSPDIIVLS(0.05)DNEAS(0.727)S(0.223)PR 196.83 3.05E-15 2551300 18894 19524 19078 23513 18996 23932 20963 18201 20728 18674 TRUE FALSE 20340.53917 18554.46655 19714.051 21591.91269 18250.12159 24842.74903 18210.53292 20579.93319 22530.88397 18064.66891 1.125984609 1.027113569 1.091304308 1.195256486 1.010266044 1.375211976 1.008074547 1.139236667 1.247234814 1 14.14088319 LTPSPDIIVLSDNEASS(ph)PR ddPTM_A459_MK2206_30min_R1 1 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LTPSPDIIVLS(0.305)DNEAS(0.014)S(0.682)PR 208.62 1.97E-16 3921300 1162 1320.2 1022.1 861.04 1246.9 1152.2 1202.2 964.99 968.95 958.43 TRUE FALSE 1063.165798 1234.25474 952.7226997 927.35745 1197.233333 1217.436568 1122.003432 956.5531942 1069.67582 1077.167544 0.987001329 1.145833577 0.884470299 0.860922198 1.111464358 1.130220247 1.041623875 0.888026379 0.993044978 1 10.07302695 -7.729575513 24.98204508 0.955401579 1.02375072 0.083813164 0.094583972 494.9760796 388073.5106 0.048017795 0.027720058 1.86E-08 7.729575513 0.06834914 LTPVRPAAAS(ph)PIVSGAR ddPTM_A459_MK2206_30min_R2 1 LTPVRPAAASPIVSGAR 17 1 I3VM54;Q9Y2K7-3;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2 I3VM54 KDM2A Lysine-specific demethylase 2A 1 LTPVRPAAAS(0.96)PIVS(0.04)GAR 82.859 0.007651 6913800 16555 21425 19232 22819 18087 13383 20774 14146 17420 17577 TRUE FALSE 17822.46353 20361.06565 19873.18528 20954.61471 17376.8135 13892.29944 18046.34885 15994.93077 18935.16011 17003.46393 1.048166633 1.197465748 1.168772749 1.232373285 1.021957265 0.817027607 1.061333674 0.940686606 1.113606039 1 14.05354106 -6.399428543 5.729043217 0.980741285 1.163669259 0.489104986 0.085106964 0.188939601 8.069692181 0.026159343 0.029640566 3.99E-07 6.399428543 0.182927973 LTPVRPAAASPIVS(ph)GAR ddPTM_A459_MK2206_30min_R2 1 LTPVRPAAASPIVSGAR 17 1 I3VM54;Q9Y2K7-3;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2 I3VM54 KDM2A Lysine-specific demethylase 2A 1 LTPVRPAAAS(0.258)PIVS(0.742)GAR 65.565 0.02373 6956000 16571 14703 17198 18137 13422 26127 17476 12663 14356 11946 TRUE FALSE 17839.6885 13972.8704 17771.37274 16655.14908 12894.98484 27121.28129 15181.38021 14318.09758 15604.65893 11556.203 1.543732704 1.209122962 1.537821094 1.441230228 1.11584963 2.346902464 1.313699682 1.238996717 1.35032752 1 13.49637983 -8.413011835 1.219435182 1.027641285 1.495438678 0.176175388 0.320906644 0.825837185 2.638652403 0.305741406 0.09636067 3.86E-09 8.413011835 0.467797393 LTPVS(ph)PESS(ph)STEEK ddPTM_A459_MK2206_30min_R1 1 LTPVSPESSSTEEK 14 0 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 2 LT(0.001)PVS(0.96)PES(0.055)S(0.886)S(0.081)T(0.017)EEK 134.02 0.012349 4533300 2081.1 2578.2 2514.8 2270.9 1551.9 1838.8 1892.1 1834.3 2150.8 1899.2 TRUE FALSE 1904.091517 2410.358711 2344.102383 2445.805111 1490.084537 1942.911267 1765.881461 1818.262908 2374.383357 2134.487234 0.892060391 1.129244848 1.098203983 1.145851365 0.698099531 0.910247312 0.827309451 0.85184998 1.112390516 1 11.05967382 -6.23475078 24.99918185 0.889454816 1.073109332 0.30978256 0.120870595 856.6821339 802453.2438 0.035138124 0.045350826 5.82E-07 6.23475078 0.183654516 LTPVS(ph)PESSS(ph)TEEK ddPTM_A459_MK2206_30min_R2 1 LTPVSPESSSTEEK 14 0 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 2 LTPVS(1)PESS(0.006)S(0.854)T(0.139)EEK 191.89 0.0019754 3107900 26682 29769 26219 26619 25002 19429 28913 18836 20639 30335 TRUE FALSE 28724.79443 28290.71475 27093.12837 24444.14255 24020.29586 20168.38421 25116.68837 21297.92987 22434.14291 29345.17143 0.978859316 0.964067114 0.923256776 0.832986872 0.818543381 0.687281185 0.855905321 0.72577289 0.764491799 1 14.84083552 -5.733910102 1.767013783 0.791188102 0.974618462 0.403641304 0.080163131 0.310434363 1.968233901 0.023586073 0.050834233 1.85E-06 5.733910102 0.18343036 LTPVS(ph)PESSSTEEK ddPTM_A459_MK2206_30min_R1 6 LTPVSPESSSTEEK 14 0 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 LT(0.002)PVS(0.734)PES(0.114)S(0.114)S(0.03)T(0.008)EEK;LT(0.002)PVS(0.871)PES(0.089)S(0.028)S(0.009)T(0.002)EEK;LTPVS(0.974)PES(0.013)S(0.006)S(0.006)T(0.001)EEK;LTPVS(0.986)PES(0.004)S(0.009)STEEK;LTPVS(0.998)PES(0.002)SSTEEK;LT(0.002)PVS(0.998)PESSSTEEK 257.81 1.19E-35 3541243400 20305.1 20449.4 21200.3 18566.03 17155 14667.05 17355.2 17096.8 17985.3 16793.85 TRUE FALSE 18578.04462 19118.14034 19761.2827 19995.98885 16471.68002 15497.4857 16197.46627 16947.32448 19854.9363 18874.39893 0.98429861 1.012913864 1.046988716 1.059423875 0.87269958 0.821084992 0.858171237 0.897900089 1.051950654 1 14.20414308 -6.261868416 24.99359779 0.904128797 1.026484129 0.381626538 0.066743383 39.18062817 2282482.835 0.021169432 0.025495379 5.47E-07 6.261868416 0.122355331 LTPVS(ph)PESSSTEEK ddPTM_A459_MK2206_30min_R2 7 LTPVSPESSSTEEK 14 0 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 LTPVS(1)PESSSTEEK;LT(0.193)PVS(0.803)PES(0.003)S(0.001)STEEK;LTPVS(1)PESSSTEEK;LTPVS(1)PESSSTEEK;LT(0.043)PVS(0.955)PES(0.001)S(0.001)STEEK;LTPVS(0.987)PES(0.007)S(0.005)S(0.001)TEEK;LT(0.001)PVS(0.998)PES(0.001)SSTEEK 249.58 1.99E-27 3768864000 1894776 2115980 1840895 1793323 1893823 1440353 2122514 1602136 1500576 2155282 TRUE FALSE 2039841.507 2010903.51 1902269.52 1646802.774 1819461.993 1495166.643 1843825.362 1811540.676 1631093.388 2084955.325 0.978362214 0.964482781 0.912379032 0.789850389 0.87266234 0.717121669 0.88434766 0.868863066 0.78231575 1 20.99158504 -5.524969248 3.779831072 0.837083801 0.967913853 0.333008632 0.071463625 0.223360105 7.033596298 0.01856417 0.037461756 2.99E-06 5.524969248 0.130830052 LTPVS(ph)PVQHQGATVNNTNK ddPTM_A459_MK2206_30min_R2 1 LTPVSPVQHQGATVNNTNK 19 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 LT(0.184)PVS(0.816)PVQHQGATVNNTNK 65.534 0.015767 14652000 26196 39018 48807 33707 61946 44104 77891 55976 82762 73516 TRUE FALSE 28201.5859 37080.42286 50434.20102 30953.03028 59513.68879 45782.40863 67663.81814 63292.25539 89960.48916 71117.17894 0.396550964 0.521398956 0.709170439 0.43523985 0.836839842 0.64376019 0.951441257 0.889971401 1.264961441 1 16.11791048 -7.117896983 0.691862353 1.114985828 0.50058765 0.737984897 0.133713775 0.359860643 0.352762628 0.105863386 0.078227098 7.62E-08 7.117896983 -0.614398178 LTPVSLS(ph)NSPIKGADCQEVPQDK ddPTM_A459_MK2206_30min_R1 1 LTPVSLSNSPIKGADCQEVPQDK 23 1 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 LTPVS(0.026)LS(0.845)NS(0.129)PIKGADCQEVPQDK 66.906 0.0020847 31973000 3626.6 3376.6 3454.3 3119.1 2968 3130.7 3623 3624.1 5040.4 4900.1 TRUE FALSE 3318.138626 3156.782726 3219.83174 3359.333622 2849.778275 3307.957529 3381.316281 3592.414876 5564.367617 5507.161382 0.602513418 0.573214131 0.584662681 0.609993677 0.517467726 0.600664716 0.613985327 0.652316979 1.010387608 1 12.42709317 -8.213510807 3.441079994 1.018273407 0.586523772 0.972762919 0.027648804 0.035369482 0.805570397 0.024800849 0.007633814 6.12E-09 8.213510807 -0.431749634 LTPVSLS(ph)NSPIKGADCQEVPQDK ddPTM_A459_MK2206_30min_R2 3 LTPVSLSNSPIKGADCQEVPQDK 23 1 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 LTPVS(0.057)LS(0.808)NS(0.135)PIKGADCQEVPQDK;LT(0.001)PVS(0.044)LS(0.51)NS(0.445)PIKGADCQEVPQDK;LT(0.001)PVS(0.056)LS(0.471)NS(0.471)PIKGADCQEVPQDK 79.942 0.00032981 93164700 343812 286250 331960 291103 268222 214125 427997 342727 248562 481347 TRUE FALSE 370134.5111 272035.2412 343027.3807 267318.9537 257690.2566 222273.6769 371800.4798 387522.5957 270181.4735 465640.6868 0.794892976 0.584217078 0.736678281 0.574088479 0.553410095 0.477350204 0.798470774 0.832235255 0.580235965 1 18.8288576 -9.812186291 0.483161772 1.051761858 0.6367336 0.424542433 0.117942651 6.523222471 1.552812423 0.74102 0.06317697 1.54E-10 9.812186291 -0.415028259 LTPVSLS(ph)NSPIKGADCQEVPQDKDGYK ddPTM_A459_MK2206_30min_R1 1 LTPVSLSNSPIKGADCQEVPQDKDGYK 27 2 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 LT(0.002)PVS(0.056)LS(0.538)NS(0.403)PIKGADCQEVPQDKDGYK 54.537 0.0040354 95568000 4843.1 5704.2 6215.7 5126.5 4730.7 4601.7 5002.3 7511.7 6270.3 4558.6 TRUE FALSE 4431.168913 5332.855543 5793.795602 5521.343918 4542.266202 4862.244277 4668.605694 7446.025999 6922.120123 5123.353784 0.86489614 1.040891527 1.13085995 1.077681564 0.886580625 0.949035433 0.911240155 1.453349957 1.351091573 1 12.3228728 -7.75291025 24.99999068 1.30166559 0.987254029 0.485691667 0.134341166 138.5499609 406111.1658 0.064218662 0.036313205 1.77E-08 7.75291025 -0.314411561 LTPVSLSNS(ph)PIK ddPTM_A459_MK2206_30min_R1 2 LTPVSLSNSPIK 12 0 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 LTPVSLS(0.018)NS(0.982)PIK;LTPVSLS(0.019)NS(0.981)PIK 196.67 0.00012455 128468000 7668.4 9113.1 8597.9 6237.2 6390.4 8311.1 11587.1 7817.8 13208.1 15767.7 TRUE FALSE 7016.162312 8519.835534 8014.298503 6717.590225 6135.856836 8781.6673 10814.1457 7749.449799 14581.12926 17721.12172 0.395920892 0.480772926 0.452245554 0.379072518 0.346245398 0.495548049 0.610240473 0.437300185 0.822810739 1 14.11318231 -8.438690661 1.059242259 1.010429246 0.429716241 0.856736563 0.076115923 0.182671591 0.447926683 0.072872621 0.023999666 3.64E-09 8.438690661 -0.580713005 down LTPVSLSNS(ph)PIK ddPTM_A459_MK2206_30min_R2 2 LTPVSLSNSPIK 12 0 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 LTPVSLS(0.015)NS(0.985)PIK;LTPVSLS(0.002)NS(0.998)PIK 179.55 0.00010389 168606000 443590 307013 291785 322550 253759 241673 473770 422470 270750 502000 TRUE FALSE 477551.5915 291767.1809 301512.9663 296196.6332 243795.1466 250870.0354 411563.4299 477688.2796 294299.3456 485619.7811 0.983385789 0.600814036 0.620882793 0.609935272 0.502028863 0.516597645 0.84750137 0.98366726 0.606028331 1 18.88946766 -7.298700773 13.96434412 0.857969813 0.628849874 0.312401019 0.159732138 4.245351363 1589.086393 0.066423885 0.044831012 5.03E-08 7.298700773 -0.22911994 LTPVSLSNS(ph)PIKGADCQEVPQDK ddPTM_A459_MK2206_30min_R2 1 LTPVSLSNSPIKGADCQEVPQDK 23 1 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 LT(0.001)PVS(0.115)LS(0.229)NS(0.655)PIKGADCQEVPQDK 44.106 0.047227 4134900 47792 40707 44101 42542 37461 22892 61085 40079 25565 61576 TRUE FALSE 51450.99227 38685.54957 45571.30533 39066.18251 35990.09291 23763.1711 53064.46612 45317.46291 27788.59749 59566.78016 0.863753121 0.649448392 0.765045638 0.655838412 0.604197387 0.398933282 0.890839928 0.760784162 0.46651166 1 15.86222036 -9.902433643 8.136315122 1.000000001 0.673268905 0.301355212 0.14945032 0 0 0.144374742 0.035016018 1.25E-10 9.902433643 -0.326731096 LTPVSLSNS(ph)PIKGADCQEVPQDKDGYK ddPTM_A459_MK2206_30min_R1 1 LTPVSLSNSPIKGADCQEVPQDKDGYK 27 2 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 LT(0.001)PVS(0.082)LS(0.232)NS(0.686)PIKGADCQEVPQDKDGYK 65.064 0.00051965 90294000 4505.5 5746.1 5318 4698.9 4248.5 3659.6 4331.9 6127.1 5477.9 4481.3 TRUE FALSE 4122.283566 5372.027846 4957.028977 5060.810092 4079.273249 3866.803389 4042.926855 6073.531411 6047.347308 5036.477276 0.818485489 1.066624061 0.984225423 1.004831317 0.809945727 0.767759523 0.802729097 1.20590863 1.200709737 1 12.29819929 -7.767516502 24.99977384 1.152481942 0.89989184 0.512386444 0.107690333 126.7713143 521494.2821 0.061852123 0.030914101 1.71E-08 7.767516502 -0.252590102 LTPVSLSNS(ph)PIKGADCQEVPQDKDGYK ddPTM_A459_MK2206_30min_R2 1 LTPVSLSNSPIKGADCQEVPQDKDGYK 27 2 P46100-4;P46100;P46100-5;P46100-3;P46100-2 P46100-4 ATRX Transcriptional regulator ATRX 1 LTPVS(0.02)LS(0.278)NS(0.702)PIKGADCQEVPQDKDGYK 67.552 0.00039353 73852000 121650 180380 159440 157320 190850 125550 231750 174840 166640 227460 TRUE FALSE 130963.6175 171422.5915 164755.65 144466.4528 183356.2701 130327.8932 201320.9466 197692.1883 181134.046 220037.9988 0.595186369 0.779059037 0.748759991 0.656552293 0.833293663 0.592297212 0.914937182 0.898445675 0.823194389 1 17.74739316 -7.85290383 0.541532145 0.990260415 0.691648308 0.527482977 0.089829592 0.661325904 0.440706402 0.088038063 0.052984054 1.40E-08 7.85290383 -0.298612107 LTPVSPESS(ph)STEEK ddPTM_A459_MK2206_30min_R2 2 LTPVSPESSSTEEK 14 0 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 LTPVS(0.001)PES(0.02)S(0.452)S(0.452)T(0.075)EEK;LTPVSPESS(0.921)S(0.076)T(0.003)EEK 236.12 1.98E-15 50504000 149023 156636 159017 136171 146592 126711 152553 127271 106473 167090 TRUE FALSE 160432.3155 148857.684 164318.5474 125045.3937 140836.0615 131533.0759 132522.6079 143905.7567 115733.8291 161637.867 0.992541652 0.920933237 1.016584483 0.773614476 0.871306112 0.813751619 0.819873525 0.890297301 0.716006906 1 17.30240569 -5.757240837 24.9999568 0.83540743 0.971111146 0.41109621 0.074311778 97.32979181 579533.9049 0.018741485 0.031037037 1.75E-06 5.757240837 0.135703715 LTPVSPESSS(ph)TEEK ddPTM_A459_MK2206_30min_R1 1 LTPVSPESSSTEEK 14 0 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 LTPVSPESS(0.005)S(0.949)T(0.046)EEK 207.08 7.07E-06 9108000 1761 2110.7 1881.8 1796.5 1392.5 1286.1 1576.9 1578.5 1589.5 1509.6 TRUE FALSE 1611.217703 1973.293046 1754.068659 1934.866741 1337.033776 1358.917871 1471.707878 1564.699341 1754.734213 1696.620645 0.949662912 1.163072636 1.033860259 1.140423905 0.788057 0.800955638 0.867434852 0.922244667 1.034252541 1 10.72844831 -6.254051444 24.99734204 0.891473462 1.075570862 0.454286672 0.090571585 505.8148298 1711441.355 0.027401771 0.034662091 5.57E-07 6.254051444 0.1840974 LTPYEVDELRR ddPTM_A459_MK2206_30min_R1 2 LTPYEVDELRR 11 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 ; 113.69 0.0094097 17281200 7445.8 7363 7239.5 6743.4 8937.3 7340.4 8055.4 7395.4 6354.1 5980.7 FALSE TRUE 6812.495611 6883.667362 6748.10291 7262.777836 8581.308416 7756.007105 7518.038964 7330.742797 7014.631433 6721.634268 1.013517746 1.024106205 1.003937828 1.080507738 1.27666994 1.153887105 1.118483789 1.090619112 1.043590168 1 12.71459633 -5.94613311 5.712092093 1.125524983 1.017339163 0.285139226 0.069095415 0.237726663 16.63449801 0.020473965 0.030501321 1.13E-06 5.94613311 -0.108185821 LTPYEVDELRR ddPTM_A459_MK2206_30min_R2 1 LTPYEVDELRR 11 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 122.69 0.0055182 4201600 11219 16733 13930 17558 17126 15936 15563 16372 17731 16626 FALSE TRUE 12077.93527 15902.06355 14394.41925 16123.45523 16453.54719 16542.45565 13519.55941 18511.87661 19273.21033 16083.49498 0.750952158 0.988719403 0.894980803 1.00248455 1.023008196 1.028536128 0.840585919 1.150985941 1.198322277 1 13.97329332 -3.07639581 0.358036482 1.069184135 1.65E-12 0.418813307 0.096611266 23.29893574 0.900402678 0.085560651 13.78483378 0.000838695 3.07639581 -1.069184135 LTQAEISEQPTMATVVPQVPTS(ph)PK ddPTM_A459_MK2206_30min_R1 1 LTQAEISEQPTMATVVPQVPTSPK 24 0 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 LTQAEISEQPTMATVVPQVPT(0.271)S(0.729)PK 116.65 9.97E-08 9922800 2361.9 3110.9 2892.4 2358.7 1978.4 1530.7 1784.1 2044.2 2227.3 2177.9 TRUE FALSE 2161.008002 2908.379845 2696.071947 2540.367483 1899.596139 1617.366911 1665.085944 2026.327775 2458.835805 2447.714694 0.882867602 1.188202143 1.101464951 1.037852773 0.776069263 0.660766108 0.680261449 0.827844756 1.004543467 1 11.25721969 -6.220519587 5.527559268 0.800672707 1.068434958 0.418484218 0.129278307 0.17958245 14.50164331 0.03980335 0.050857609 6.02E-07 6.220519587 0.267762251 LTQAEISEQPTMATVVPQVPTS(ph)PK ddPTM_A459_MK2206_30min_R2 1 LTQAEISEQPTMATVVPQVPTSPK 24 0 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 LTQAEISEQPTMATVVPQVPT(0.279)S(0.721)PK 96.913 6.41E-06 2607300 12242 11060 13434 8135 10239 7938.4 11372 9878.6 10290 11854 TRUE FALSE 13179.25693 10510.77648 13881.88286 7470.344477 9836.965413 8240.501375 9878.84274 11169.76694 11185.0056 11467.20495 1.14929985 0.916594456 1.21057249 0.651452949 0.857834621 0.718614641 0.861486542 0.974061856 0.975390747 1 13.48522617 -3.113878746 8.339804886 0.920459688 1.101572465 0 0.164094867 0 0 0.038186058 0 0.000769345 3.113878746 0.181112776 LTQTS(ph)STEQLNVLETETEVLNK ddPTM_A459_MK2206_30min_R1 2 LTQTSSTEQLNVLETETEVLNK 22 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 LT(0.007)QT(0.133)S(0.51)S(0.277)T(0.073)EQLNVLETETEVLNK;LT(0.002)QT(0.161)S(0.494)S(0.258)T(0.085)EQLNVLETETEVLNK 205.12 3.41E-23 9388900 4422.4 4952.3 5402.8 4042.4 5075.2 4881.6 4933.6 5187.8 4859.2 4560 TRUE FALSE 4046.251657 4629.90437 5036.072989 4353.746348 4873.044037 5157.991973 4604.488546 5142.443612 5364.331229 5124.927226 0.789523729 0.903408803 0.982662342 0.849523546 0.950851363 1.00645175 0.898449547 1.00341788 1.046713639 1 12.3233158 -1.994722169 0.26617808 1.0113856 1.23E-16 0.551169973 0.051530103 33.63646887 0.586208899 0.063462525 14.80613615 0.010122268 1.994722169 -1.0113856 LTQTS(ph)STEQLNVLETETEVLNK ddPTM_A459_MK2206_30min_R2 3 LTQTSSTEQLNVLETETEVLNK 22 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 LT(0.02)QT(0.06)S(0.347)S(0.227)T(0.347)EQLNVLETETEVLNK;LT(0.069)QT(0.075)S(0.482)S(0.299)T(0.075)EQLNVLETETEVLNK;LT(0.007)QT(0.134)S(0.499)S(0.282)T(0.077)EQLNVLETETEVLNK 191.59 5.42E-22 17028500 98491 111026 101603 119548 109630 104425 129671 101846 105805 113160 TRUE FALSE 106031.5467 105512.6103 104990.3933 109780.546 105325.3754 108398.9665 112645.0419 115157.6219 115007.7276 109467.5985 0.968611244 0.963870696 0.959100179 1.002858814 0.962160281 0.990237916 1.029026338 1.051979065 1.050609763 1 16.74014438 -7.201347632 2.700026076 1.038899103 0.972058534 0.726592745 0.01777648 0.138235093 1.982580989 0.007733098 0.005445846 6.29E-08 7.201347632 -0.066840569 LTQTSS(ph)TEQLNVLETETEVLNK ddPTM_A459_MK2206_30min_R1 2 LTQTSSTEQLNVLETETEVLNK 22 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 LT(0.003)QT(0.049)S(0.172)S(0.603)T(0.172)EQLNVLETETEVLNK;LT(0.004)QT(0.054)S(0.178)S(0.587)T(0.178)EQLNVLETETEVLNK 229.87 1.15E-30 30230000 12236.6 11209.3 11294.1 9396.4 11935.3 10917 12564.9 11386.8 11479.9 10687.4 TRUE FALSE 11195.81291 10479.57253 10527.48796 10120.11236 11459.89173 11535.11111 11726.71845 11287.24641 12673.27669 12011.4358 0.932096138 0.872466265 0.876455416 0.84253977 0.954081753 0.960344067 0.976296143 0.939708341 1.055100897 1 13.55212099 -6.441588701 4.097076976 0.980237632 0.880247315 0.665240426 0.035160264 0.145854295 4.526869887 0.011224172 0.012566914 3.62E-07 6.441588701 -0.099990318 LTQTSS(ph)TEQLNVLETETEVLNK ddPTM_A459_MK2206_30min_R2 1 LTQTSSTEQLNVLETETEVLNK 22 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 LT(0.004)QT(0.063)S(0.187)S(0.56)T(0.187)EQLNVLETETEVLNK 170.55 4.13E-12 4567200 41015 47639 43577 50542 46749 41029 54421 45308 42379 51305 TRUE FALSE 44155.13994 45273.31653 45029.83543 46412.55692 44913.39937 42590.38735 47275.45733 51229.91117 46065.04882 49630.92205 0.88966995 0.912199787 0.907293952 0.935154033 0.904947914 0.858142174 0.95254038 1.032217598 0.928152186 1 15.59895164 -7.516560632 24.58553241 0.986586745 0.903854232 0.625244988 0.030049672 149.3140867 581031.4714 0.013088719 0.007902852 3.04E-08 7.516560632 -0.082732513 LTQYHGGS(ph)LPNVSQLR ddPTM_A459_MK2206_30min_R1 2 LTQYHGGSLPNVSQLR 16 0 Q6UUV7;Q6UUV7-3;H0YK33 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 LTQYHGGS(1)LPNVSQLR;LTQYHGGS(1)LPNVSQLR 107.92 0.00214 31221000 8685.2 7222.6 8556.6 5872.6 10087.8 8018.7 10297.5 9320.9 8284.4 7674.1 TRUE FALSE 7946.478132 6752.407427 7975.801832 6324.90867 9685.981565 8472.711864 9610.572564 9239.408354 9145.593026 8624.825444 0.921349444 0.782903662 0.924749363 0.733337586 1.123035084 0.982363286 1.114291834 1.071257432 1.060380072 1 13.07427954 -6.269063619 24.98902149 1.061094788 0.842476655 0.716249792 0.067194905 288.972164 947126.541 0.019137159 0.022114536 5.38E-07 6.269063619 -0.218618133 LTQYHGGS(ph)LPNVSQLR ddPTM_A459_MK2206_30min_R2 2 LTQYHGGSLPNVSQLR 16 0 Q6UUV7;Q6UUV7-3;H0YK33 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 LTQYHGGS(0.998)LPNVS(0.002)QLR;LTQY(0.001)HGGS(0.999)LPNVSQLR 103.92 0.0027423 23526000 65801 74643 70930 86299 79628 89266 96330 70118 71293 79726 TRUE FALSE 70838.77515 70936.33716 73294.7708 79248.09564 76501.40462 92663.08018 83681.75529 79282.66335 77493.93627 77124.54715 0.918498426 0.919763419 0.950342965 1.027534016 0.991920309 1.201473248 1.085021026 1.027982222 1.004789514 1 16.23490249 -5.822289728 1.580343708 1.06317708 0.916358692 0.483658488 0.057203902 0.336419172 1.709442374 0.019788888 0.040844369 1.51E-06 5.822289728 -0.146818388 LTRPAAS(ph)PAVGEK ddPTM_A459_MK2206_30min_R1 3 LTRPAASPAVGEK 13 1 F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8;Q8N2M8-4 F5H0Q6 CLASRP CLK4-associating serine/arginine rich protein 1 LT(0.002)RPAAS(0.998)PAVGEK;LT(0.008)RPAAS(0.992)PAVGEK;LTRPAAS(1)PAVGEK 126.91 0.0093976 115726000 9265.4 9692.2 9107.8 7905.4 9674.6 8312.9 9593.8 8754.8 8330.8 7331 TRUE FALSE 8477.329075 9061.236018 8489.587912 8514.275278 9289.240196 8783.569214 8953.815107 8678.257707 9196.816472 8239.219626 1.028899515 1.09976872 1.030387379 1.033383702 1.12744175 1.0660681 1.086730966 1.053286367 1.116224217 1 13.00829198 -3.835917271 18.52821737 1.067323309 1.063167897 0 0.040197605 0 0 0.008650925 0 0.000145909 3.835917271 -0.004155412 LTRPAAS(ph)PAVGEK ddPTM_A459_MK2206_30min_R2 2 LTRPAASPAVGEK 13 1 F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8;Q8N2M8-4 F5H0Q6 CLASRP CLK4-associating serine/arginine rich protein 1 LT(0.002)RPAAS(0.998)PAVGEK;LTRPAAS(1)PAVGEK 137.81 0.0048465 25260800 65386 85277 65544 67661 75941 61381 78488 63627 60692 65815 TRUE FALSE 70392.00243 81042.26818 67729.20425 62132.87986 72959.17477 63716.89697 68182.43132 71943.26736 65970.88045 63667.46194 1.105619736 1.272899307 1.063796203 0.975896918 1.14594131 1.000776457 1.070914864 1.129984849 1.036178896 1 15.95826863 -5.349348065 8.72351912 1.056630595 1.188942143 0.420558441 0.0639109 0.290173097 26.46742183 0.015840479 0.033075997 4.47E-06 5.349348065 0.132311547 LTS(ph)DEEGEPSGK ddPTM_A459_MK2206_30min_R1 2 LTSDEEGEPSGK 12 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 LT(0.057)S(0.943)DEEGEPSGK;LT(0.025)S(0.975)DEEGEPSGK 243.85 9.95E-14 50819000 15205.8 15858.4 14878.1 12139.3 12256.8 11696.1 14594.7 12772.6 15964.6 16855.2 TRUE FALSE 13912.46686 14826.01528 13868.21602 13074.27099 11768.5857 12358.32307 13621.11419 12660.9305 17624.1773 18943.34943 0.734424866 0.78265015 0.73208891 0.690177365 0.621251577 0.652383208 0.719044657 0.668357544 0.930362256 1 14.20940382 -8.360059979 3.970685855 0.994548207 0.69982615 0.851540555 0.044581085 0.089411729 2.364356795 0.048326632 0.012841428 4.36E-09 8.360059979 -0.294722058 LTS(ph)DEEGEPSGK ddPTM_A459_MK2206_30min_R2 1 LTSDEEGEPSGK 12 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 LT(0.02)S(0.98)DEEGEPSGK 224.25 1.08E-08 71161000 300290 241170 258440 274480 228840 178650 282410 240570 181990 281500 TRUE FALSE 323280.4333 229193.8485 267056.2606 252054.106 219854.5918 185448.6509 245329.2278 272013.325 197819.1612 272314.6781 1.187157577 0.841650733 0.980689923 0.925598678 0.807354908 0.681008649 0.900903431 0.998893365 0.726435911 1 18.05491522 -2.782429526 1.606243206 0.866878887 199.962114 0.422577111 0.107256376 864.2377582 4.639037184 0.029803774 631812.0944 0.001650329 2.782429526 199.0952351 LTS(ph)DEEGEPSGKR ddPTM_A459_MK2206_30min_R1 1 LTSDEEGEPSGKR 13 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 LTS(1)DEEGEPSGKR 221.09 1.90E-08 13514000 3281.3 3702.7 4164.5 3492.9 3218.8 2795.9 3304.6 3494.3 2959.6 2394.3 TRUE FALSE 3002.208204 3461.653557 3881.825343 3761.923763 3090.58838 2954.201442 3084.156164 3463.749704 3267.261011 2690.92396 1.115679316 1.2864182 1.442562258 1.398004484 1.148523119 1.097839064 1.146132782 1.287197169 1.214178126 1 11.39388591 -6.277960072 24.06273589 1.160638973 1.31835523 0.353429079 0.106234763 618.4861025 900835.9815 0.034837768 0.039625861 5.27E-07 6.277960072 0.157716257 LTS(ph)DEEGEPSGKR ddPTM_A459_MK2206_30min_R2 1 LTSDEEGEPSGKR 13 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 LT(0.002)S(0.998)DEEGEPSGKR 180.61 0.00020244 9927200 48840 77780 70296 66524 66961 59056 68482 40723 58315 59034 TRUE FALSE 52579.22795 73917.5583 72639.63355 61088.7764 64331.77469 61303.41746 59490.23114 46045.63592 63387.13329 57107.72541 0.920702542 1.294353045 1.271975604 1.069711251 1.126498634 1.07346978 1.0417195 0.806294343 1.10995724 1 15.8013983 -7.043600552 1.526360809 0.967773765 1.155428582 0.245694085 0.120793762 0.499995677 2.34343322 0.06126347 0.043958455 9.04E-08 7.043600552 0.187654817 LTS(ph)PVTSISPIQASEK ddPTM_A459_MK2206_30min_R1 1 LTSPVTSISPIQASEK 16 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4 Q7Z589 EMSY;C11orf30 Protein EMSY 1 LT(0.158)S(0.755)PVT(0.069)S(0.001)IS(0.017)PIQASEK 130.95 0.00074336 6590600 2190.5 2221.6 2279.7 1920.8 2230.2 2062.4 1957.2 2000.6 2322.9 2175.6 TRUE FALSE 2004.186472 2076.973436 2124.960316 2068.740349 2141.366411 2179.171306 1826.638759 1983.108965 2564.373768 2445.129753 0.81966467 0.84943281 0.869058304 0.846065673 0.875768007 0.891229311 0.747051872 0.81104447 1.04876797 1 11.25569531 -8.26234322 24.99994638 1.024384006 0.840218375 0.775620091 0.039949296 38.54458395 1066044.627 0.034010638 0.010720406 5.47E-09 8.26234322 -0.184165631 LTS(ph)PVTSISPIQASEK ddPTM_A459_MK2206_30min_R2 1 LTSPVTSISPIQASEK 16 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4 Q7Z589 EMSY;C11orf30 Protein EMSY 1 LT(0.007)S(0.993)PVT(0.001)SISPIQASEK 130.47 0.00078405 3512500 55200 62319 56078 65093 55146 50296 65552 39827 50038 59502 TRUE FALSE 59426.15444 59224.32908 57947.61253 59774.69368 52980.69095 52210.04952 56944.94366 45032.52565 54390.21479 57560.45461 1.032412875 1.028906555 1.006726109 1.038468061 0.920435589 0.907047206 0.989306704 0.782351806 0.944923301 1 15.81279037 -6.267845667 22.40864169 0.915544952 1.02536954 0.438104678 0.056439659 108.0213862 377848.9725 0.016869347 0.019644683 5.40E-07 6.267845667 0.109824588 LTS(ph)QSEAMALQSIR ddPTM_A459_MK2206_30min_R2 1 LTSQSEAMALQSIR 14 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C0A7 E7EUN2 AGAP1 "Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1" 1 LT(0.025)S(0.975)QSEAMALQSIR 84.842 0.025357 1829300 17097 18477 16489 18199 15643 15344 15800 11904 11859 15884 TRUE FALSE 18405.95947 17559.45905 17038.73503 16712.08348 15028.77722 15927.92667 13725.44102 13459.89367 12890.47438 15365.70638 1.197859637 1.142769399 1.108880686 1.087622207 0.978072654 1.03658929 0.893251549 0.87596973 0.838911929 1 13.90742647 -6.317868585 0.723921086 0.888871836 1.185131641 0.804897449 0.05056581 0.307956525 0.351176813 0.030796037 0.051479434 4.81E-07 6.317868585 0.296259805 LTSPVTSIS(ph)PIQASEK ddPTM_A459_MK2206_30min_R1 1 LTSPVTSISPIQASEK 16 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4 Q7Z589 EMSY;C11orf30 Protein EMSY 1 LTSPVT(0.001)S(0.145)IS(0.854)PIQASEK 160.64 5.27E-05 7791700 2203.5 2219.7 1808.2 2062.5 1928.9 1908.5 1908.6 1656.7 1728.5 1714.4 TRUE FALSE 2016.080754 2075.197127 1685.464422 2221.354107 1852.067828 2016.557621 1781.280776 1642.215647 1908.18376 1926.792815 1.046340187 1.077021416 0.874751249 1.152876474 0.961217944 1.046587679 0.924479665 0.852305258 0.990341954 1 10.91198573 -7.267833323 24.43496852 0.929473816 1.024647815 0.212979149 0.078287056 531.2786408 2030312.442 0.030696208 0.021296929 5.40E-08 7.267833323 0.095173999 LTSPVTSIS(ph)PIQASEK ddPTM_A459_MK2206_30min_R2 3 LTSPVTSISPIQASEK 16 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4 Q7Z589 EMSY;C11orf30 Protein EMSY 1 LTSPVT(0.01)S(0.004)IS(0.986)PIQASEK;LTSPVTS(0.008)IS(0.991)PIQASEK;LTSPVTS(0.002)IS(0.998)PIQASEK 181.94 9.42E-07 13528700 47276.2 62401 56509.6 61860 56105.1 53100.9 64259.2 49389.1 45867.5 61690.3 TRUE FALSE 50895.70222 59302.25708 58393.60186 56805.84012 53902.13187 55121.69196 55821.88985 55844.42495 49856.97224 59677.35056 0.852847885 0.993714642 0.97848851 0.951882743 0.903225954 0.923661849 0.935394908 0.935772524 0.835442119 1 15.86489587 -6.240937768 22.61281733 0.919766068 0.950214619 0.035639561 0.051489767 691.5288052 762737.1787 0.014723429 0.01897388 5.74E-07 6.240937768 0.030448551 LTSS(ph)CPDLPSQTDKK ddPTM_A459_MK2206_30min_R2 2 LTSSCPDLPSQTDKK 15 1 P56962 P56962 STX17 Syntaxin-17 1 LT(0.04)S(0.174)S(0.786)CPDLPSQTDKK;LT(0.04)S(0.214)S(0.744)CPDLPS(0.002)QTDKK 87.088 0.0097634 14551000 36963 50702 39931 48377 47473 36619 54242 40361 37567 51032 TRUE FALSE 39792.9157 48184.21241 41262.27961 44424.44435 45608.97149 38012.56171 47119.96024 45636.32128 40834.50975 49366.83002 0.806065848 0.976044287 0.835830042 0.899884484 0.923878877 0.770002078 0.954486246 0.924432889 0.827164915 1 15.59125439 -10.80880077 3.349904055 1.000465281 0.883468468 0.236978834 0.064420241 24070443 34418230.26 114270.2774 0.015428153 1.55E-11 10.80880077 -0.116996814 LTTPTYGDLNHLVS(ph)ATMSGVTTCLR ddPTM_A459_MK2206_30min_R1 1 LTTPTYGDLNHLVSATMSGVTTCLR 25 0 P04350;M0R2D3;P68371;P07437;Q5JP53;Q5ST81;Q9BVA1;Q13885 P04350;P68371;P07437;Q9BVA1 TUBB4A;TUBB4B;TUBB;TUBB2B;TUBB2A Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain 1 LTTPT(0.001)Y(0.002)GDLNHLVS(0.692)AT(0.243)MS(0.047)GVT(0.011)T(0.004)CLR 66.399 0.0013317 6770300 514.7 491.44 502.73 388.41 564.84 529.45 620.58 507.39 490.48 418.37 TRUE FALSE 470.9220622 459.4471667 468.6060883 418.3254055 542.3412267 559.4270015 579.1822405 502.9539427 541.4671512 470.2008341 1.001533872 0.977129629 0.996608373 0.889673891 1.153424638 1.189761823 1.231776293 1.0696577 1.151565697 1 8.877133288 -6.276260477 24.88843513 1.143987725 0.969183951 0.596797168 0.066625525 491.4313443 825237.5085 0.020316984 0.023130022 5.29E-07 6.276260477 -0.174803774 LTTPTYGDLNHLVSATMS(ph)GVTTCLR ddPTM_A459_MK2206_30min_R1 1 LTTPTYGDLNHLVSATMSGVTTCLR 25 0 P04350;M0R2D3;P68371;P07437;Q5JP53;Q5ST81;Q9BVA1;Q13885 P04350;P68371;P07437;Q9BVA1 TUBB4A;TUBB4B;TUBB;TUBB2B;TUBB2A Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain 1 LTTPTYGDLNHLVS(0.011)AT(0.146)MS(0.723)GVT(0.06)T(0.06)CLR 89.659 0.00073518 0 1069.4 1135.2 1416 1112.4 1209.5 981.12 998.14 983.52 1102.4 1000.4 TRUE FALSE 978.4419144 1061.298274 1319.885865 1198.077241 1161.323054 1036.670167 931.5559018 974.9211883 1216.998425 1124.337105 0.870238926 0.943932446 1.173923603 1.065585433 1.032895783 0.922027888 0.828537898 0.867107547 1.08241418 1 10.13485894 -6.763375127 24.99998808 0.924744234 1.024620567 0.121664799 0.098737293 94.52269899 1220737.411 0.035919418 0.033281779 1.72E-07 6.763375127 0.099876333 LTTTGQVT(ph)SPVK ddPTM_A459_MK2206_30min_R1 4 LTTTGQVTSPVK 12 0 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 LTTTGQVT(0.5)S(0.5)PVK;LTTTGQVT(0.5)S(0.5)PVK;LTTTGQVT(0.5)S(0.5)PVK;LTTTGQVT(0.5)S(0.5)PVK 213.99 5.02E-06 384940000 27600.2 30728.1 29857.5 22355.5 21678.1 21516.2 27920.2 22513.9 29782.8 30492.7 TRUE FALSE 25252.65806 28727.6951 27830.85609 24077.32448 20814.61537 22734.42865 26057.6944 22317.06335 32878.82864 34270.36588 0.736865727 0.838266367 0.812096847 0.702569811 0.607364842 0.663384474 0.760356469 0.651205868 0.95939532 1 15.06467397 -8.330262672 6.00313782 0.989465959 0.723522021 0.698891171 0.067823722 0.14969475 9.845750272 0.072354992 0.018971101 4.67E-09 8.330262672 -0.265943938 LTTTGQVT(ph)SPVK ddPTM_A459_MK2206_30min_R2 3 LTTTGQVTSPVK 12 0 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 LTTTGQVT(0.779)S(0.221)PVK;LTTTGQVT(0.5)S(0.5)PVK;LTTTGQVT(0.5)S(0.5)PVK 225.63 7.53E-09 493911000 908230 820070 785450 780750 768580 604340 991390 697820 573120 845330 TRUE FALSE 977764.7871 779346.5163 811636.511 716960.2275 738401.6874 627338.5822 861219.3021 789027.47 622968.9416 817746.9513 1.19568136 0.953041176 0.992527712 0.876750719 0.902970884 0.767154902 1.053161129 0.964879745 0.76181139 1 19.64129495 LTTTGQVT(ph)SPVKGASFVTSTNPR ddPTM_A459_MK2206_30min_R2 1 LTTTGQVTSPVKGASFVTSTNPR 23 1 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 LTT(0.002)T(0.008)GQVT(0.584)S(0.405)PVKGASFVTSTNPR 117.83 1.49E-05 117060000 125780 343880 247680 323950 357690 367320 329980 194770 342200 223980 TRUE FALSE 135409.8135 326803.4192 255937.5276 297482.2487 343645.2934 381298.62 286653.2296 220227.1077 371963.9374 216671.5509 0.624954282 1.508289472 1.181223499 1.372964044 1.586019447 1.759800114 1.322985082 1.016409892 1.716717935 1 17.72515021 -4.756277016 24.99399418 1.394769724 0.624953085 0.449093216 0.252307546 149.8450027 725406.0549 0.062122421 0.51028633 1.75E-05 4.756277016 -0.769816639 LTTTGQVTS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 LTTTGQVTSPVK 12 0 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 LTTTGQVT(0.153)S(0.846)PVK;LTTTGQVT(0.018)S(0.982)PVK 84.821 0.032105 349395000 665940 616670 644140 600320 555580 431810 719410 543060 401040 609580 TRUE FALSE 716924.8784 586047.0645 665615.3061 551271.9357 533765.1376 448242.8321 624950.6028 614039.8066 435921.7343 589689.4545 1.215766829 0.993823206 1.128755654 0.93485127 0.905163105 0.760133709 1.059796132 1.041293518 0.739239495 1 19.16959587 -5.792494644 7.501104985 0.919842547 1.100939521 0.383507014 0.111684993 0.21060653 39.66057342 0.031367313 0.047644301 1.61E-06 5.792494644 0.181096973 LTTTGQVTS(ph)PVKGASFVTSTNPR ddPTM_A459_MK2206_30min_R1 2 LTTTGQVTSPVKGASFVTSTNPR 23 1 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 LTTT(0.001)GQVT(0.136)S(0.846)PVKGAS(0.009)FVT(0.006)S(0.002)T(0.001)NPR;LTTTGQVT(0.254)S(0.744)PVKGAS(0.002)FVT(0.001)STNPR 119.35 5.86E-06 452410000 6540.3 6632.3 7217.2 6699.2 7335.4 5658.4 6027.9 7877.7 4677.9 2885.67 TRUE FALSE 5984.013141 6200.536065 6727.316572 7215.173545 7043.215485 5978.773718 5625.78979 7808.826099 5164.184445 3243.168585 1.845113192 1.911875964 2.074303693 2.224729722 2.1717081 1.843497666 1.734658449 2.407776807 1.592326859 1 11.6631883 -8.542413023 7.254121103 1.000032085 2.019403764 0.733782498 0.19319868 0.1074403 35.33058871 0.188733654 0.048816032 2.87E-09 8.542413023 1.019371679 LTTTGQVTS(ph)PVKGASFVTSTNPR ddPTM_A459_MK2206_30min_R2 1 LTTTGQVTSPVKGASFVTSTNPR 23 1 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 LTT(0.003)T(0.008)GQVT(0.317)S(0.67)PVKGAS(0.001)FVT(0.001)STNPR 81.151 0.00028373 112750000 63845 100280 95477 111390 111940 114700 88006 71124 103210 77355 TRUE FALSE 68733.02229 95300.24102 98660.15553 102289.0807 107544.6731 119064.9889 76450.70649 80420.15101 112187.0192 74830.91269 0.918511078 1.273541075 1.318441163 1.366936163 1.437169069 1.591120362 1.021646052 1.07469157 1.499206881 1 16.19134675 -11.27412074 2.788822546 0.942934572 1.281980462 0.142238378 0.204526053 104043216.6 75455013.28 40596967.36 0.051991361 5.32E-12 11.27412074 0.339045889 LTVAS(ph)PK ddPTM_A459_MK2206_30min_R2 1 LTVASPK 7 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 LTVAS(1)PK 112.11 0.014704 58441000 392140 356900 354470 312740 321150 223130 428530 311570 253580 383050 TRUE FALSE 422162.5399 339176.865 366287.8529 287188.1416 308540.0374 231621.3685 372263.4962 352293.2688 275635.93 370551.1099 1.139282892 0.915330857 0.988494821 0.77502977 0.83265177 0.625072662 1.004621188 0.950727874 0.743854013 1 18.49931302 -4.169421109 1.037981002 0.848871704 1.792835253 0.330940371 0.118222726 6.596252431 2.362110113 0.037571708 9.375882738 6.77E-05 4.169421109 0.943963549 LTVENS(ph)PK ddPTM_A459_MK2206_30min_R1 4 LTVENSPK 8 0 F8VVL1;O43583 F8VVL1 DENR Density-regulated protein 1 LT(0.005)VENS(0.995)PK;LT(0.028)VENS(0.972)PK;LT(0.126)VENS(0.874)PK;LTVENS(1)PK 133.42 0.0030655 306133000 40838 54864.1 51372.7 36726.9 22758.6 23107.8 33647.6 27601.8 55691.9 60709.3 TRUE FALSE 37364.51365 51292.43712 47885.66426 39555.6122 21852.07677 24416.14367 31403.03 27360.48037 61481.2723 68230.42642 0.547622455 0.751753137 0.701822732 0.579735673 0.3202688 0.357848323 0.460249652 0.401001163 0.901082926 1 16.05812761 -8.368750079 4.856789742 0.989142527 0.518398789 0.633401649 0.133090466 0.164474576 5.677530138 0.148370517 0.038839488 4.28E-09 8.368750079 -0.470743738 LTVENS(ph)PK ddPTM_A459_MK2206_30min_R2 5 LTVENSPK 8 0 F8VVL1;O43583 F8VVL1 DENR Density-regulated protein 1 LT(0.032)VENS(0.968)PK;LT(0.319)VENS(0.681)PK;LT(0.001)VENS(0.999)PK;LTVENS(1)PK;LTVENS(1)PK 117.14 0.0090084 503321000 2889120 1924780 2298190 1596900 1468180 1051500 2349300 1752640 1066230 2425560 TRUE FALSE 3110313.249 1829198.224 2374810.508 1466428.162 1410531.876 1091515.569 2040834.088 1981716.066 1158968.758 2346414.176 1.325560202 0.779571758 1.012102012 0.624965608 0.601143605 0.465184527 0.8697672 0.84457215 0.493931877 1 21.16202626 -1.803285158 0.926096474 0.702250628 199.9999995 0.476507462 0.183668369 499.0403768 1.762317752 0.059944847 209377.8413 0.015729497 1.803285158 199.2977489 LTVENS(ph)PKQEAGISEGQGTAGEEEEK ddPTM_A459_MK2206_30min_R1 3 LTVENSPKQEAGISEGQGTAGEEEEK 26 1 F8VVL1;O43583 F8VVL1 DENR Density-regulated protein 1 LTVENS(0.998)PKQEAGIS(0.002)EGQGTAGEEEEK;LT(0.009)VENS(0.981)PKQEAGIS(0.006)EGQGT(0.005)AGEEEEK;LT(0.002)VENS(0.997)PKQEAGIS(0.001)EGQGTAGEEEEK 107.03 1.69E-08 210213000 5782.9 7647.6 6959.5 6440.2 3325.11 3285.85 3938.51 4366.38 5510.5 3778.74 TRUE FALSE 5291.033988 7149.73985 6487.10853 6936.22532 3192.663828 3471.891987 3675.779184 4328.2052 6083.336195 4246.878839 1.245864125 1.683528097 1.52750026 1.633252462 0.751767109 0.817516138 0.865524853 1.019149678 1.432425182 1 12.05218723 -6.254126402 24.99229376 0.968066975 1.534390251 0.628759726 0.203601205 374.7152663 1280598.569 0.062853539 0.07948794 5.57E-07 6.254126402 0.566323276 LTVENS(ph)PKQEAGISEGQGTAGEEEEK ddPTM_A459_MK2206_30min_R2 5 LTVENSPKQEAGISEGQGTAGEEEEK 26 1 F8VVL1;O43583 F8VVL1 DENR Density-regulated protein 1 LT(0.003)VENS(0.996)PKQEAGIS(0.001)EGQGT(0.001)AGEEEEK;LT(0.022)VENS(0.978)PKQEAGISEGQGTAGEEEEK;LT(0.002)VENS(0.998)PKQEAGISEGQGTAGEEEEK;LT(0.013)VENS(0.973)PKQEAGIS(0.008)EGQGT(0.006)AGEEEEK;LTVENS(1)PKQEAGISEGQGTAGEEEEK 119.69 4.25E-09 232087300 181917 238714 207575 197394 202064 124129 281088 209436 139614 223409 TRUE FALSE 195844.7054 226859.8099 214495.4469 181266.2788 194129.9521 128852.8161 244180.808 236810.0043 151757.3734 216119.1826 0.906188442 1.049697704 0.992486851 0.838732946 0.898254147 0.596211843 1.129843288 1.095738016 0.702192982 1 17.72146761 -5.737473957 23.98954819 0.895956962 0.98948179 0.061792851 0.157061929 460.1029646 460559.5161 0.043572831 0.075408605 1.83E-06 5.737473957 0.093524828 LTVNGVCAS(ph)TPPLTPIK ddPTM_A459_MK2206_30min_R1 1 LTVNGVCASTPPLTPIK 17 0 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 LTVNGVCAS(0.5)T(0.5)PPLTPIK 208.85 4.42E-09 15586000 2147.1 2218.6 2384.2 2135.4 2219 1919.9 1982.5 1996.7 2178.1 1735.8 TRUE FALSE 1964.47787 2074.168737 2222.367147 2299.868878 2130.612531 2028.603079 1850.251042 1979.243062 2404.521289 1950.844009 1.006988699 1.063216089 1.139182393 1.178909676 1.092149102 1.039859194 0.948436182 1.014557317 1.23255436 1 10.92988271 -6.722994027 5.728426605 1.041740685 1.101807428 0.080751986 0.080909104 0.464547034 38.44198618 0.028603742 0.027957325 1.89E-07 6.722994027 0.060066743 LTVNGVCAS(ph)TPPLTPIK ddPTM_A459_MK2206_30min_R2 2 LTVNGVCASTPPLTPIK 17 0 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 LTVNGVCAS(0.5)T(0.5)PPLTPIK;LTVNGVCAS(0.497)T(0.497)PPLT(0.005)PIK 92.773 0.0077012 24046000 127872 147632 125247 139043 140504 133767 133918 112455 110144 116874 TRUE FALSE 137661.9786 140300.8096 129422.6725 127682.7421 134987.107 138857.5969 116334.4057 127153.2546 119724.126 113060.411 1.217596659 1.240936667 1.144721405 1.129332019 1.193937877 1.228171698 1.028957924 1.124648792 1.05893942 1 16.78673432 -7.763917133 0.374739315 0.988782411 1.221893488 0.639369641 0.048660545 0.80615555 0.326817719 0.065485224 0.060196157 1.72E-08 7.763917133 0.233111078 LTVNGVCAST(ph)PPLTPIK ddPTM_A459_MK2206_30min_R1 1 LTVNGVCASTPPLTPIK 17 0 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 LTVNGVCAS(0.021)T(0.977)PPLT(0.002)PIK 133.87 0.0013954 16771000 2755 2315 2885 2718.9 3036.7 2592.8 2558 2567.2 2377.4 2093.2 TRUE FALSE 2520.672783 2164.293079 2689.174238 2928.310149 2915.741809 2739.602095 2387.360487 2544.755241 2624.539238 2352.521419 1.071477081 0.919988682 1.143102977 1.244753874 1.239411376 1.164538641 1.014809246 1.081713952 1.115628201 1 11.19999214 -10.68656375 14.54064947 1.000000011 1.111605608 0.112868436 0.092985665 0 0 0.101040333 0.02450588 2.06E-11 10.68656375 0.111605596 LTVNGVCASTPPLT(ph)PIK ddPTM_A459_MK2206_30min_R2 1 LTVNGVCASTPPLTPIK 17 0 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 LTVNGVCAS(0.016)T(0.024)PPLT(0.96)PIK 87.388 0.046179 0 9092.6 11376 13905 15612 10807 8493 13027 9349.8 9427.2 16052 TRUE FALSE 9788.736447 10811.08438 14368.58576 14336.44966 10382.66288 8816.207066 11316.53925 10571.85096 10247.16082 15528.22455 0.630383494 0.696221538 0.925320581 0.923251052 0.668631681 0.567753708 0.728772257 0.680815178 0.659905502 1 13.92260527 -10.61658135 3.669201583 1.000127839 0.724527381 0.363241795 0.111031697 61940734.74 113127239.5 98872.24437 0.030328299 2.42E-11 10.61658135 -0.275600458 LTWHS(ph)CPEDEAQ ddPTM_A459_MK2206_30min_R1 3 LTWHSCPEDEAQ 12 0 Q13185 Q13185 CBX3 Chromobox protein homolog 3 1 LTWHS(1)CPEDEAQ;LTWHS(1)CPEDEAQ;LTWHS(1)CPEDEAQ 120.03 0.0041308 133454000 15889.6 17103.3 17208.4 14438 16447.4 15182.6 15931.1 13883.6 13135.1 11682.7 TRUE FALSE 14538.10608 15989.87206 16040.34175 15550.01726 15792.26523 16042.22569 14868.36539 13762.21715 14500.54065 13130.04108 1.107239954 1.217808228 1.221652062 1.184308348 1.20275825 1.221795545 1.132392907 1.048147304 1.104378925 1 13.68058381 -7.562406962 3.242598351 1.057027531 1.194855742 0.718859759 0.039531766 0.131795459 2.858470979 0.019864804 0.010971854 2.74E-08 7.562406962 0.137828211 LTWHS(ph)CPEDEAQ ddPTM_A459_MK2206_30min_R2 4 LTWHSCPEDEAQ 12 0 Q13185 Q13185 CBX3 Chromobox protein homolog 3 1 LTWHS(1)CPEDEAQ;LTWHS(1)CPEDEAQ;LTWHS(1)CPEDEAQ;LTWHS(1)CPEDEAQ 161.25 0.0004804 198498000 223637 292808 273979 294009 276152 258616 304925 219796 248353 261230 TRUE FALSE 240758.8207 278267.5805 283113.3231 269987.5242 265308.8849 268457.8131 264887.9812 248524.0919 269954.295 252706.0865 0.952722683 1.101151082 1.120326491 1.068385522 1.049871369 1.062332201 1.048205783 0.983451152 1.068254029 1 17.94710089 -7.535414458 23.6832426 1.018677217 1.063110025 0.139072601 0.045997265 234.3303603 442701.014 0.021489785 0.012419493 2.91E-08 7.535414458 0.044432808 LTWS(ph)PGSVTNTSLAHELWK ddPTM_A459_MK2206_30min_R1 2 LTWSPGSVTNTSLAHELWK 19 0 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7;H7C269;H3BRT3 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 LT(0.171)WS(0.767)PGS(0.062)VTNTSLAHELWK;LT(0.089)WS(0.906)PGS(0.005)VTNTSLAHELWK 126.86 0.00023826 9787200 5692.5 4364.8 5360.5 4399.8 6449.7 6249.4 5666.1 5476.5 3446.32 3592.73 TRUE FALSE 5208.322982 4080.650727 4996.644195 4738.673358 6192.794792 6603.235627 5288.124807 5428.619538 3804.577297 4037.824516 1.289883441 1.010606258 1.237459472 1.173570902 1.533695872 1.635344875 1.309647011 1.344441671 0.942234434 1 11.9793625 -8.261313724 24.99988682 0.971117176 1.316809102 0.412561908 0.165011189 12.29249443 2447024.84 0.146227696 0.047209401 5.48E-09 8.261313724 0.345691927 LVAIVDVIDQNR ddPTM_A459_MK2206_30min_R1 1 LVAIVDVIDQNR 12 0 P50914;E7EPB3 P50914 RPL14 60S ribosomal protein L14 0 206.73 0.00013879 5063200 2069.7 2606.6 2110.8 2332.1 2419.8 2191.4 2339.1 1698.8 1342.9 1755.1 FALSE TRUE 1893.661147 2436.909866 1967.524777 2511.718746 2323.414242 2315.475174 2183.062907 1683.947571 1482.499261 1972.535038 0.960013946 1.235420319 0.997459989 1.273345567 1.177882368 1.173857564 1.106729596 0.853697165 0.751570559 1 10.94583521 -7.735743403 4.857798409 0.848891517 1.141928932 0.558497905 0.107148548 0.122201812 7.123201189 0.05264845 0.02770881 1.84E-08 7.735743403 0.293037415 LVAMGFS(ph)PYNVS(ph)K ddPTM_A459_MK2206_30min_R1 1 LVAMGFSPYNVSK 13 0 F6TD35 F6TD35 DHRS4L2 2 LVAMGFS(1)PY(0.005)NVS(0.995)K 166.07 0.0062205 10158000 1551 1394.3 1221 1434.9 1883.6 1337.4 1459.4 1232.5 979.72 1112.3 TRUE FALSE 1419.079305 1303.530817 1138.121922 1545.416247 1808.572223 1413.122432 1362.046089 1221.724382 1081.5654 1250.100121 1.13517252 1.042741133 0.910424615 1.236233978 1.446741899 1.130407403 1.089549601 0.977301227 0.865183021 1 10.28782793 -7.718264498 2.548413347 0.929594476 1.149886549 0.322626122 0.132122987 0.384708947 5.014470816 0.092271812 0.042414319 1.91E-08 7.718264498 0.220292073 LVDVS(ph)PDR ddPTM_A459_MK2206_30min_R2 1 LVDVSPDR 8 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LVDVS(1)PDR 99.788 0.018368 10538000 27929 31564 28642 30198 25272 24754 34524 27235 17886 27740 TRUE FALSE 30067.26571 29996.57766 29596.90998 27730.7268 24279.6943 25696.03082 29990.95733 30794.70801 19441.69195 26834.84607 1.120456053 1.117821864 1.102928256 1.033384977 0.90478232 0.957562072 1.117612423 1.147564176 0.72449426 1 14.71181999 -5.851237671 3.458762849 0.98765215 1.115942671 0.237153103 0.10955794 0.386173189 9.067729193 0.032272804 0.051644435 1.41E-06 5.851237671 0.12829052 LVDVS(ph)PDRGSPPSR ddPTM_A459_MK2206_30min_R1 2 LVDVSPDRGSPPSR 14 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LVDVS(0.969)PDRGS(0.03)PPS(0.001)R;LVDVS(0.996)PDRGS(0.004)PPSR 115.83 0.013008 30836000 4877.2 4501.2 5381.9 4583.4 5072.5 4558.3 4444.2 4470.6 5007.6 4524.8 TRUE FALSE 4462.368529 4208.171062 5016.591623 4936.414262 4870.451584 4816.387007 4147.735527 4431.514016 5528.15794 5085.366384 0.877492041 0.827505974 0.986475948 0.970709658 0.957738581 0.947107178 0.815621769 0.871424727 1.087071712 1 12.312136 -1.522878855 0.015432493 1.69731527 1.39E-10 0.160957666 0.073898891 11999.62434 14.34891056 627.0630277 989.1242073 0.029999992 1.522878855 -1.69731527 LVDVS(ph)PDRGSPPSR ddPTM_A459_MK2206_30min_R2 1 LVDVSPDRGSPPSR 14 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LVDVS(1)PDRGSPPSR 163.62 0.0012663 16603000 41243 60145 55527 54369 59396 57828 72416 44331 52748 48241 TRUE FALSE 44400.59579 57158.28676 57378.24247 49926.87878 57063.8146 60028.68506 62907.69221 50125.21391 57335.92569 46666.90012 0.951436579 1.224814303 1.229527616 1.069856336 1.22278991 1.286322531 1.348015232 1.074106353 1.228620833 1 15.51011202 -4.757344422 24.77716241 1.1963368 0.951436176 0.32075155 0.102100022 125.9481298 761952.3329 0.024890357 0.185932997 1.75E-05 4.757344422 -0.244900624 LVDVSPDRGS(ph)PPSR ddPTM_A459_MK2206_30min_R1 1 LVDVSPDRGSPPSR 14 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LVDVS(0.366)PDRGS(0.634)PPSR 120.9 0.0094919 6024700 958.26 1236 1162.9 963.08 1232.5 1059.3 1138.7 1035.3 1217 1048.3 TRUE FALSE 876.754955 1155.536175 1083.965588 1037.256588 1183.406915 1119.276651 1062.739401 1026.248481 1343.511505 1178.171318 0.74416593 0.980787902 0.92004072 0.880395383 1.004443833 0.950011796 0.902024505 0.871051998 1.140336286 1 10.20233362 -4.756653617 24.94698216 0.952351428 0.744165605 0.424316332 0.075166801 141.8711928 739449.1978 0.017969532 0.1425469 1.75E-05 4.756653617 -0.208185823 LVEALCAEHQINLIK ddPTM_A459_MK2206_30min_R1 1 LVEALCAEHQINLIK 15 0 P25398 P25398 RPS12 40S ribosomal protein S12 0 183.89 2.95E-05 9201500 3230.7 2851.4 2729.9 3100 3120.5 2901.4 2777.9 2751.9 2449.8 2282.6 FALSE TRUE 2955.912 2665.773342 2544.601994 3338.762537 2996.203877 3065.674761 2592.59136 2727.840428 2704.465477 2565.385721 1.152229069 1.03913159 0.991898401 1.301466095 1.167935041 1.195015134 1.010604892 1.063325646 1.054213974 1 11.32496004 -7.272132061 24.84141963 1.037313262 1.13833896 0.303851869 0.080775215 1035.806967 2406393.606 0.036353142 0.024787416 5.34E-08 7.272132061 0.101025699 LVEDEERR ddPTM_A459_MK2206_30min_R1 2 LVEDEERR 8 1 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ; 122.52 0.0086114 10771900 4927.4 4883.7 4848.2 4728.6 5151.5 5079.2 5264 4925 3018.4 3947.4 FALSE TRUE 4508.298755 4565.770242 4519.117692 5092.797591 4946.304847 5366.779915 4912.848165 4881.941244 3332.173481 4436.433713 1.016198831 1.029153265 1.018637488 1.147948537 1.114928153 1.209705872 1.107386807 1.100420193 0.751092814 1 12.1151847 -8.239900476 24.54406394 0.875546422 1.09536327 0.542063605 0.079942095 410.5218119 467800.6114 0.054977729 0.020735321 5.76E-09 8.239900476 0.219816848 LVEDEERR ddPTM_A459_MK2206_30min_R2 3 LVEDEERR 8 1 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ;; 112.41 0.015132 10252200 43491 62919 58721 62408 62106 77877 61184 44615.7 74931 50111 FALSE TRUE 46820.7044 59794.53395 60678.72883 57309.06677 59667.40638 80840.66381 53150.4673 50447.12518 81448.36294 48475.88217 0.965855644 1.233490372 1.251730265 1.18221813 1.230867881 1.667647089 1.096431151 1.040664407 1.680183202 1 15.56497953 -4.160697066 1.368359826 1.278223203 4.16E-12 0.140468305 0.221943082 12.16051764 6.097821546 0.0620468 32.68119354 6.91E-05 4.160697066 -1.278223203 LVEPHS(ph)PSPSSK ddPTM_A459_MK2206_30min_R1 4 LVEPHSPSPSSK 12 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 LVEPHS(0.987)PS(0.012)PS(0.001)SK;LVEPHS(0.996)PS(0.003)PSSK;LVEPHS(0.986)PS(0.01)PS(0.003)S(0.001)K;LVEPHS(0.966)PS(0.023)PS(0.007)S(0.004)K 215.02 1.02E-06 109456000 24404.7 21129.5 21814.7 18892.2 25106.9 22561.7 23442.3 20625.4 16991.9 16735.8 TRUE FALSE 22328.95211 19753.96571 20333.97894 20347.28052 24106.83901 23839.12396 21878.50694 20445.0743 18758.26881 18809.15725 1.187131981 1.050231302 1.081068049 1.081775236 1.281654392 1.267421163 1.163183796 1.0869745 0.997294486 1 14.19914759 -8.052023215 2.806197809 0.998446755 1.157303496 0.441746599 0.071909378 0.308303286 4.545261141 0.065580062 0.022263745 8.87E-09 8.052023215 0.15885674 LVEPHS(ph)PSPSSK ddPTM_A459_MK2206_30min_R2 3 LVEPHSPSPSSK 12 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 LVEPHS(0.991)PS(0.008)PS(0.001)SK;LVEPHS(0.979)PS(0.02)PS(0.001)SK;LVEPHS(0.997)PS(0.003)PSSK 118.52 0.0029781 155497000 335628 472630 369486 477500 461520 436680 476778 378379 384103 396851 TRUE FALSE 361323.9377 449159.8815 381804.4788 438486.7226 443398.4058 453298.1634 414176.4759 427834.4345 417511.5846 383901.7844 0.941188482 1.169986439 0.99453687 1.142184643 1.154978757 1.180765972 1.078860513 1.114437213 1.087547914 1 18.55037774 -4.747644813 24.95828213 1.107364338 0.941188059 0.377630448 0.061888002 710.3190966 1285093.314 0.014876017 0.293971025 1.79E-05 4.747644813 -0.166176279 LVEQANS(ph)PK ddPTM_A459_MK2206_30min_R1 3 LVEQANSPK 9 0 O95391 O95391 SLU7 Pre-mRNA-splicing factor SLU7 1 LVEQANS(1)PK;LVEQANS(1)PK;LVEQANS(1)PK 148.78 0.0014957 261074000 18204.1 23213.5 23748.7 19871.2 13185.6 12031.9 15325.2 16514.5 17656 17422.7 TRUE FALSE 16655.7457 21702.29693 22136.70441 21401.68327 12660.38963 12713.13578 14302.88387 16370.11547 19491.40438 19581.15561 0.850600753 1.108325645 1.130510622 1.092973453 0.64655988 0.6492536 0.730441255 0.836013757 0.995416449 1 14.25717829 -6.246616348 24.65918329 0.78943817 1.056147714 0.415001685 0.135770862 630.8802645 1049514.093 0.041764687 0.053676486 5.67E-07 6.246616348 0.266709543 LVEQANS(ph)PK ddPTM_A459_MK2206_30min_R2 4 LVEQANSPK 9 0 O95391 O95391 SLU7 Pre-mRNA-splicing factor SLU7 1 LVEQANS(1)PK;LVEQANS(1)PK;LVEQANS(1)PK;LVEQANS(1)PK 126.12 0.0048809 419281000 931380 898670 885880 709790 705560 501687 924280 678920 558441 879840 TRUE FALSE 1002687.169 854043.3546 915414.7971 651797.8865 677856.1692 520779.0503 802920.9257 767657.1751 607013.1887 851130.8929 1.178064593 1.003421873 1.075527636 0.765802172 0.796418242 0.61186717 0.943357752 0.90192611 0.713184298 1 19.69902149 -5.755289751 24.90031491 0.810468181 1.077446512 0.536148142 0.113425224 107.5788057 435588.7469 0.030784809 0.05163034 1.76E-06 5.755289751 0.266978331 LVETTMVPS(ph)PEAK ddPTM_A459_MK2206_30min_R1 2 LVETTMVPSPEAK 13 0 Q16236-3;Q16236-2;Q16236;C9J0Y1;K7EIW5;C9J1A8 Q16236-3 NFE2L2 Nuclear factor erythroid 2-related factor 2 1 LVETTMVPS(0.999)PEAK;LVET(0.158)T(0.015)MVPS(0.827)PEAK 166.03 0.00034284 9654500 4468 5444.8 5775.2 3597.6 4077.2 4612.8 6117.8 4260.8 7451.6 9332.2 TRUE FALSE 4087.973138 5090.34253 5383.195515 3874.687775 3914.79649 4873.97275 5709.692725 4223.548275 8226.220486 10488.34339 0.389763472 0.485333321 0.513255079 0.369428005 0.373252128 0.464703773 0.54438461 0.40268974 0.784320286 1 13.35649921 -8.44567669 2.965059855 0.997828174 0.445179599 0.907781043 0.059078683 0.065735092 1.181543641 0.058952065 0.015824427 3.58E-09 8.44567669 -0.552648575 down LVETTMVPS(ph)PEAK ddPTM_A459_MK2206_30min_R2 3 LVETTMVPSPEAK 13 0 Q16236-3;Q16236-2;Q16236;C9J0Y1;K7EIW5;C9J1A8 Q16236-3 NFE2L2 Nuclear factor erythroid 2-related factor 2 1 LVETT(0.002)MVPS(0.998)PEAK;LVET(0.001)TMVPS(0.999)PEAK;LVETT(0.001)MVPS(0.999)PEAK 149.32 0.0005225 7970400 102865.6 78302 97590.2 81221 93327 63960.8 108065 85009 70880 97342 TRUE FALSE 110741.0694 74413.63654 100843.8086 74584.98449 89662.51305 66394.87306 93875.93569 96119.96818 77045.01428 94165.73851 1.176022948 0.790241097 1.070918257 0.79206074 0.952177665 0.705085248 0.996922418 1.020753086 0.818185207 1 16.52291462 -4.745568022 24.91519125 0.90552965 1.176023735 0.330019938 0.115782916 1024.506897 1608201.124 0.027275297 0.684143926 1.80E-05 4.745568022 0.270494085 LVGAHSPCYGR ddPTM_A459_MK2206_30min_R1 1 LVGAHSPCYGR 11 0 Q9NR16-3;Q9NR16-2;Q9NR16;Q9NR16-4 Q9NR16-3 CD163L1 Scavenger receptor cysteine-rich type 1 protein M160 0 64.73 0.046543 3688000 961.73 998.35 1050.4 804.5 911.29 1108.8 1115.9 996.49 714.59 786.63 FALSE TRUE 879.9298133 933.3572335 979.1017746 866.4627294 874.9913896 1171.579298 1041.460347 987.777793 788.8741877 884.0836632 0.995301519 1.055734058 1.10747638 0.980068703 0.989715596 1.32519053 1.178011076 1.117289951 0.892307166 1 9.788039092 -3.605336565 0.669092376 1.091671894 0.63047349 0.02680763 0.115414264 49.36397729 5.024734664 0.051267984 24.81976049 0.000248121 3.605336565 -0.461198404 LVGATATS(ph)SPPPK ddPTM_A459_MK2206_30min_R2 1 LVGATATSSPPPK 13 0 H9KVD1;Q96QD9-4;Q96QD9 H9KVD1 FYTTD1 UAP56-interacting factor 1 LVGAT(0.001)AT(0.079)S(0.572)S(0.348)PPPK 158.01 0.00036474 3719100 27418 29513 25812 28159 30316 27583 35624 26689 25563 26965 TRUE FALSE 29517.14316 28047.42734 26672.5592 25858.31962 29125.64151 28632.69039 30946.52601 30177.34394 27786.42353 26085.13426 1.131569532 1.075226489 1.022519529 0.991304832 1.11656092 1.097663141 1.186366369 1.156878996 1.065220645 1 14.67094024 -6.381566316 24.42059019 1.115451022 1.054208251 0.123969157 0.058568363 23.42061276 4683.144511 0.018460052 0.020931732 4.15E-07 6.381566316 -0.061242771 LVGATATSS(ph)PPPK ddPTM_A459_MK2206_30min_R1 2 LVGATATSSPPPK 13 0 H9KVD1;Q96QD9-4;Q96QD9 H9KVD1 FYTTD1 UAP56-interacting factor 1 LVGATAT(0.009)S(0.071)S(0.92)PPPK;LVGATAT(0.007)S(0.063)S(0.93)PPPK 178.15 0.00010594 51840000 18434.4 17743.5 16636.3 15093 17717.3 15735.4 15759.7 16714.7 15099.9 13175.4 TRUE FALSE 16866.45748 16588.39492 15507.07431 16255.46548 17011.58242 16626.32475 14708.39917 16568.56514 16669.58864 14807.66802 1.13903536 1.120257079 1.04723271 1.097773495 1.148836022 1.122818578 0.993296118 1.118917923 1.1257403 1 13.85405684 -14.52287875 0.305456567 0.151275623 1.104429573 0.312093703 0.044890511 379.4971887 3.470639513 206.993297 0.045438749 3.00E-15 14.52287875 0.95315395 LVGATATSS(ph)PPPK ddPTM_A459_MK2206_30min_R2 2 LVGATATSSPPPK 13 0 H9KVD1;Q96QD9-4;Q96QD9 H9KVD1 FYTTD1 UAP56-interacting factor 1 LVGATAT(0.005)S(0.028)S(0.968)PPPK;LVGAT(0.049)AT(0.223)S(0.223)S(0.505)PPPK 161.25 0.00036371 29855000 81467 96405 85216 92792 96966 77838 106375 82703 77020 85587 TRUE FALSE 87704.17616 91617.66789 88057.05891 85210.59677 93158.62762 80800.17963 92407.83472 93512.56606 83719.06038 82794.3032 1.059302063 1.106569708 1.063564225 1.029184297 1.125181613 0.975914725 1.116113442 1.129456526 1.011169333 1 16.33724388 -8.428750566 8.112449612 1.000106103 1.074356113 0.278465564 0.045252315 0.354089408 25.93917731 0.042403893 0.010960369 3.73E-09 8.428750566 0.07425001 LVGIISS(ph)R ddPTM_A459_MK2206_30min_R2 1 LVGIISSR 8 0 P12268;H0Y4R1;E7ETK5 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 1 LVGIIS(0.05)S(0.95)R 83.647 0.038396 7818000 85595 88530 94271 97793 80710 86012 100940 72928 63876 88957 TRUE FALSE 92148.21901 84133.72893 97413.94809 89802.99908 77540.91986 89285.24693 87686.45675 82459.94 69431.81902 86054.34038 1.070814309 0.977681411 1.132005052 1.04356153 0.901069249 1.037544958 1.018966113 0.958231039 0.806836921 1 16.39296034 -7.144594708 0.717707759 0.919097173 1.048989997 0.284408325 0.073339928 0.962844012 1.006264702 0.061795154 0.043625116 7.17E-08 7.144594708 0.129892824 LVGLNLS(ph)PPMSPVQLPLR ddPTM_A459_MK2206_30min_R2 3 LVGLNLSPPMSPVQLPLR 18 0 Q8N0Z3 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 1 LVGLNLS(0.961)PPMS(0.039)PVQLPLR;LVGLNLS(0.97)PPMS(0.03)PVQLPLR;LVGLNLS(0.999)PPMS(0.001)PVQLPLR 183.73 5.88E-10 118248000 196819 252929 235427 233240 223707 267878 264693 235388 227390 211421 TRUE FALSE 211887.614 240368.9137 243276.0187 214183.5459 214923.1391 278072.285 229938.4911 266154.0198 247167.9712 204522.3501 1.036012025 1.175269664 1.189483783 1.047237849 1.050854046 1.35961808 1.124270727 1.301344424 1.208513256 1 17.64189898 -6.717050751 24.99986608 1.212929641 1.106031313 0.180534427 0.10281826 210.191636 118380.0971 0.032396892 0.03239673 1.92E-07 6.717050751 -0.106898328 LVGTPNPST(ph)PLPNTVPQFIAR ddPTM_A459_MK2206_30min_R1 1 LVGTPNPSTPLPNTVPQFIAR 21 0 E5RJD7;H0YC46;E5RFP4;H0YBU9;E5RJ31;B4E3T4;Q93062-4;Q93062-5;Q93062;Q93062-2;Q93062-3 E5RJD7 RBPMS RNA-binding protein with multiple splicing 1 LVGTPNPS(0.229)T(0.771)PLPNTVPQFIAR 208.07 2.68E-17 5721300 2328.2 2675.5 2123.7 2188.5 2420.3 1932 2167.8 1907.9 1658.8 1797.6 TRUE FALSE 2130.174364 2501.324464 1979.549161 2357.058649 2323.894326 2041.38817 2023.190017 1891.219431 1831.238196 2020.300259 1.054385037 1.238095403 0.979829187 1.166687297 1.150271756 1.010438008 1.001430361 0.936108097 0.906418829 1 10.98035401 -7.051942635 2.054749795 0.950221689 1.11923751 0.526525736 0.070066523 0.250814923 2.106486582 0.030538044 0.022901633 8.87E-08 7.051942635 0.169015821 LVHDS(ph)LEDLQMTR ddPTM_A459_MK2206_30min_R1 3 LVHDSLEDLQMTR 13 0 A0A087WYY3;A0A2R8Y635;A0A2R8YDN7;Q9H7F0-2;Q9H7F0 A0A087WYY3 ATP13A3 Probable cation-transporting ATPase 13A3 1 LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR 176.08 6.63E-05 14668500 5387.89 4445.37 3939.58 4128.27 5591.8 5199.58 6483.8 5683.8 6442.3 6033.9 TRUE FALSE 4929.621663 4155.975605 3672.172286 4446.230071 5369.066765 5493.975726 6051.277532 5634.107136 7112.000139 6781.425086 0.726930048 0.612846939 0.541504513 0.655648336 0.791731339 0.810150618 0.892331251 0.830814624 1.048747136 1 12.72737277 -7.007358031 0.697103074 0.994180322 0.611242787 0.816809419 0.066133294 0.307692818 0.313555 0.055212601 0.044597272 9.83E-08 7.007358031 -0.382937535 LVHDS(ph)LEDLQMTR ddPTM_A459_MK2206_30min_R2 4 LVHDSLEDLQMTR 13 0 A0A087WYY3;A0A2R8Y635;A0A2R8YDN7;Q9H7F0-2;Q9H7F0 A0A087WYY3 ATP13A3 Probable cation-transporting ATPase 13A3 1 LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR 178.47 7.07E-05 8811600 49599.1 43931.8 51780.8 54376.9 47006.6 52314.9 64943.6 39305.4 60126.4 51463.9 TRUE FALSE 53396.44523 41750.21069 53507.14603 49934.13333 45160.88469 54305.78018 56416.42731 44442.75074 65356.08559 49784.63716 1.072548647 0.83861635 1.074772241 1.003002857 0.907124914 1.09081402 1.133209571 0.892700103 1.312776176 1 15.603413 -6.785441986 24.95995657 1.082150627 0.978032575 0.16666612 0.11911784 425.4420946 442407.7595 0.039526076 0.034876479 1.64E-07 6.785441986 -0.104118052 LVHNLT(ph)SPK ddPTM_A459_MK2206_30min_R2 1 LVHNLTSPK 9 0 Q7Z7G8-2;Q7Z7G8-6;Q7Z7G8 Q7Z7G8-2 VPS13B Vacuolar protein sorting-associated protein 13B 1 LVHNLT(0.669)S(0.331)PK 87.568 0.043854 4958600 42673 40786 44296 41988 34454 26944 38144 30720 25942 32895 TRUE FALSE 45940.07769 38760.62655 45772.80653 38557.44609 33101.16284 27969.3728 33135.64698 34735.20948 28198.38827 31821.63884 1.443674159 1.218058779 1.438417636 1.211673801 1.040209243 0.878941934 1.041292912 1.091559415 0.886138781 1 14.95772052 -6.143605412 2.680137655 0.987653692 1.351075331 0.799439507 0.085500465 0.121006514 1.689615654 0.026240256 0.035791866 7.18E-07 6.143605412 0.363421639 LVHSGSGCRS(ph)PSLGSDLTFATR ddPTM_A459_MK2206_30min_R2 2 LVHSGSGCRSPSLGSDLTFATR 22 1 Q13425 Q13425 SNTB2 Beta-2-syntrophin 1 LVHS(0.153)GS(0.153)GCRS(0.564)PS(0.125)LGS(0.006)DLTFATR;LVHS(0.239)GS(0.239)GCRS(0.501)PS(0.02)LGS(0.001)DLTFATR 60.454 0.0064499 9991300 13509.1 28344 21347.2 31527 33097 34556 32694 22926.1 30231 20310.7 TRUE FALSE 14543.36708 26936.47818 22058.90499 28951.14325 31797.44548 35871.05279 28401.23853 25922.61999 32860.43773 19647.96352 0.740197174 1.370955221 1.122706939 1.473493333 1.618358332 1.82568808 1.445505459 1.319354037 1.672460237 1 14.26209217 -4.435182269 0.965335822 1.498983055 4.10E-13 0.429737869 0.235587287 3.348814019 1.585432153 0.076720675 6.134194552 3.67E-05 4.435182269 -1.498983055 LVIGDHK ddPTM_A459_MK2206_30min_R1 1 LVIGDHK 7 0 O00193;E9PM92;E9PRZ9 O00193 SMAP;C11orf58 Small acidic protein 0 119.21 0.014486 7884200 4653 4460.6 4171.8 3718.3 4124 4314.9 4218.6 4099.4 2312.2 3506.2 FALSE TRUE 4257.237916 4170.214129 3888.629839 4004.68411 3959.732347 4559.205909 3937.184891 4063.559378 2552.561464 3940.574526 1.080359701 1.058275665 0.986817991 1.016269096 1.004861682 1.156990149 0.999139812 1.031209878 0.647763783 1 11.94419027 -8.139510299 9.555521001 0.824413987 1.041454645 0.475245 0.091622492 0.266412748 19.33135189 0.057270774 0.021589129 7.25E-09 8.139510299 0.217040658 LVIGDHK ddPTM_A459_MK2206_30min_R2 2 LVIGDHK 7 0 O00193;E9PM92;E9PRZ9 O00193 SMAP;C11orf58 Small acidic protein 0 ; 138.24 0.0041389 8836800 97193 115350 100021 116438 109710 105380 115737 99109 99052 111069 FALSE TRUE 104634.1708 109621.8867 103355.6502 106924.6429 105402.2342 109390.3097 100540.5929 112062.8866 107667.3639 107444.8276 0.97384093 1.020262112 0.961941608 0.995158588 0.980989374 1.018106801 0.935741581 1.042980747 1.002071168 1 16.71323651 -7.797680784 24.99999956 1.016894415 0.985945304 0.22959858 0.025981184 256.8541742 177179.5354 0.013144877 0.00631484 1.59E-08 7.797680784 -0.030949111 LVIIEGDLER ddPTM_A459_MK2206_30min_R1 1 LVIIEGDLER 10 0 J3KN67;A0A2R2Y2Q3;A0A494C0P6;P06753;P06753-7;P06753-2;A0A087WWU8;P06753-5;P06753-3;P06753-6;P06753-4 J3KN67;P06753-2 TPM3 Tropomyosin alpha-3 chain 0 160.82 0.0060348 2036700 804.3 1088.4 968.91 737.05 1187.4 928.15 955.4 820.7 674.54 1203.2 FALSE TRUE 735.8900615 1017.544962 903.1430887 793.8177187 1140.103344 980.7010509 891.6670092 813.5247064 744.6608469 1352.2615 0.544192127 0.752476472 0.667876065 0.587029742 0.843108632 0.725230328 0.659389482 0.601603097 0.55067814 1 10.40115845 -11.68159054 2.528948736 1.842695387 0.665631356 0.563071399 0.089931007 7311185.909 1535621.2 35538940.09 0.023549949 2.08E-12 11.68159054 -1.177064031 LVIIESDLER ddPTM_A459_MK2206_30min_R2 2 LVIIESDLER 10 0 P09493-3;P09493-9;A0A0S2Z4G6;P09493-4;P09493-10;P09493;Q6ZN40;P09493-2;H7BYY1;H0YKX5;P09493-8;P09493-7;P09493-5;H0YKJ4;F5H7S3;A0A494BZZ2;H0YK48;B7Z596;P09493-6;A0A494C0V8;H0YL42 P09493-3 TPM1 Tropomyosin alpha-1 chain 0 ; 143.7 0.014695 1946230 11021.2 10175.4 11738.1 11668.3 13285.1 11786.4 13185.6 8396 9302.1 11579.8 FALSE TRUE 11864.99155 9670.104432 12129.4424 10714.96256 12763.46022 12234.93971 11454.31488 9493.386028 10111.17984 11201.95207 1.059189637 0.863251723 1.082797205 0.956526371 1.139396075 1.092214967 1.022528467 0.847476044 0.902626594 1 13.45146254 -7.702566772 9.305053848 0.906468402 1.030293051 0.293978605 0.080603144 0.388313073 57.72450067 0.038563174 0.022167593 1.98E-08 7.702566772 0.123824649 LVIIT(ph)AGAR ddPTM_A459_MK2206_30min_R2 2 LVIITAGAR 9 0 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2 P00338 LDHA L-lactate dehydrogenase A chain 1 LVIIT(1)AGAR;LVIIT(1)AGAR 115.23 0.019252 5773200 18868 21025 19529.7 22709 21028.9 20780.2 24964 21152.9 17753.8 20917.8 TRUE FALSE 20312.54859 19980.92907 20180.81045 20853.60206 20203.19972 21571.00507 21686.19681 23917.65666 19297.99343 20235.2539 1.003819803 0.987431597 0.997309475 1.030557964 0.998415924 1.06601109 1.071703717 1.181979568 0.953681803 1 14.30458333 -6.765298302 23.02400025 1.067113273 1.003772396 0.154263255 0.056251574 54.67767542 326224.5883 0.018695943 0.017136487 1.72E-07 6.765298302 -0.063340876 LVINGNPIT(ph)IFQERDPSK ddPTM_A459_MK2206_30min_R1 1 LVINGNPITIFQERDPSK 18 1 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 LVINGNPIT(1)IFQERDPSK 91.565 0.007366 8009100 1895.2 1810 2209.2 1601.7 2037.9 1681.7 1858.3 1978.1 1555.4 1252.8 TRUE FALSE 1734.003288 1692.168671 2059.245659 1725.063212 1956.726128 1776.916401 1734.336198 1960.80568 1717.089396 1408.006322 1.231530896 1.201818944 1.462525861 1.225181439 1.389714021 1.262008823 1.231767337 1.392611418 1.219518243 1 10.4594381 -8.543774733 21.03644111 0.999999996 1.299269465 0.542157969 0.083105135 380.3678698 382925.1789 0.07685226 0.019843168 2.86E-09 8.543774733 0.299269468 LVINGNPITIFQER ddPTM_A459_MK2206_30min_R1 1 LVINGNPITIFQER 14 0 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 242.45 1.37E-18 3541900 1663.9 1805.9 1653.2 1424 1787 1775.2 1979.7 1619.6 1510.5 1499.3 FALSE TRUE 1522.376568 1688.335582 1540.98539 1533.676727 1715.820006 1875.71029 1847.637825 1605.440008 1667.52188 1685.044603 0.903463662 1.001953051 0.914507181 0.91016981 1.018263851 1.113151715 1.09649194 0.952758167 0.989601033 1 10.71857106 -6.349252558 5.680719156 1.034747982 0.936456303 0.45173203 0.051564471 0.231560542 11.79427364 0.017542811 0.019966705 4.47E-07 6.349252558 -0.098291679 LVINGNPITIFQER ddPTM_A459_MK2206_30min_R2 1 LVINGNPITIFQER 14 0 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 114.76 0.040105 2851600 8969.7 10112 9098.6 10160 9343 9438.2 8337.1 7682.5 6558.8 10496 FALSE TRUE 9656.427129 9609.852784 9401.942783 9329.8955 8976.146875 9797.377315 7242.428755 8686.629128 7129.272568 10153.51638 0.95104265 0.946455634 0.925978984 0.918883188 0.884043177 0.964924559 0.713292665 0.855529139 0.702148133 1 13.30969183 -7.244136097 24.98859577 0.805703239 0.929515711 0.324919332 0.079808961 838.3700248 1210736.549 0.028106072 0.021720982 5.70E-08 7.244136097 0.123812472 LVINGNPITIFQERDPS(ph)K ddPTM_A459_MK2206_30min_R1 2 LVINGNPITIFQERDPSK 18 1 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 LVINGNPITIFQERDPS(1)K;LVINGNPITIFQERDPS(1)K 136.59 0.00019253 88219000 7933.1 9180.4 10198.1 7830.3 5789 5534.4 6876.8 7139.4 10173.2 10370.7 TRUE FALSE 7258.348187 8582.754291 9505.881386 8433.391063 5558.411872 5847.752945 6418.061219 7076.980979 11230.74055 11655.50061 0.622740149 0.736369426 0.815570408 0.723554598 0.476891732 0.501716155 0.550646552 0.607179495 0.963557115 1 13.50872335 -8.276955336 7.554259677 0.984588665 0.630165271 0.661059928 0.100951902 0.130402016 42.88259248 0.102364744 0.029682226 5.28E-09 8.276955336 -0.354423394 LVINGNPITIFQERDPS(ph)K ddPTM_A459_MK2206_30min_R2 2 LVINGNPITIFQERDPSK 18 1 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 LVINGNPITIFQERDPS(1)K;LVINGNPIT(0.002)IFQERDPS(0.998)K 96.777 0.013922 12636000 30990 27576 31708 26740 20373 17927.7 32610 22904 19065.5 33284 TRUE FALSE 33362.61823 26206.61594 32765.12889 24555.25646 19573.05365 18609.95119 28328.26783 25897.63144 20723.78273 32197.94581 1.036172259 0.813921984 1.017615505 0.762634257 0.60789759 0.577985667 0.879815998 0.80432558 0.643636798 1 14.97468103 -5.84613282 6.673471793 0.73581928 0.940936825 0.320785138 0.132808227 0.245926954 15.85279647 0.0372196 0.055794015 1.43E-06 5.84613282 0.205117545 LVINGNPITIFQERDPS(ph)KIK ddPTM_A459_MK2206_30min_R1 1 LVINGNPITIFQERDPSKIK 20 2 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 LVINGNPIT(0.006)IFQERDPS(0.994)KIK 47.942 0.035089 76582000 10886 12549 13635 12357 8652.6 7271.4 9165.9 10401 9410.2 7023.8 TRUE FALSE 9960.088535 11732.05782 12709.49419 13308.73828 8307.94862 7683.100384 8554.459535 10310.06515 10388.42396 7893.961371 1.26173515 1.486206642 1.610027411 1.685939119 1.052443536 0.973288318 1.08367132 1.306069877 1.315996301 1 12.94653374 -6.270040746 24.99655576 1.127871868 1.51628279 0.624434404 0.147751885 460.4974297 1338255.957 0.049948258 0.057520563 5.37E-07 6.270040746 0.388410922 LVINGNPITIFQERDPSK ddPTM_A459_MK2206_30min_R1 2 LVINGNPITIFQERDPSK 18 1 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 191.15 6.69E-10 73258000 8959.7 9165.2 10020.9 9360.9 9435.9 7610.6 8366.4 9847.2 6172.1 5097.5 FALSE TRUE 8197.630466 8568.543814 9340.709228 10081.87814 9060.048122 8041.505595 7808.292721 9761.106969 6813.711882 5729.016784 1.43089657 1.495639503 1.630420992 1.759792041 1.58143159 1.403644971 1.362937659 1.703801426 1.189333552 1 12.48407185 -8.45377256 4.395437105 1.002742168 1.54338946 0.694577821 0.122646078 0.113520424 4.066820599 0.126922837 0.033178022 3.52E-09 8.45377256 0.540647292 LVLAES(ph)PQPK ddPTM_A459_MK2206_30min_R2 2 LVLAESPQPK 10 0 A0A1B0GVL4;P78312-6;P78312-2;P78312-5;P78312;E7EUR8;P78312-4 A0A1B0GVL4;E7EUR8 FAM193A Protein FAM193A 1 LVLAES(1)PQPK;LVLAES(1)PQPK 137.4 0.0017508 42032000 317720 359830 361370 398160 390400 316690 415550 308390 291530 393240 TRUE FALSE 342044.8875 341961.3654 373417.8954 365629.0543 375070.9344 328741.8599 360987.7858 348697.6319 316886.7524 380408.611 0.899151275 0.898931716 0.981623141 0.961148207 0.98596857 0.864180911 0.948947462 0.916639692 0.83301677 1 18.53719038 -6.756444563 24.99985241 0.909621356 0.945676201 0.095057471 0.050201453 302.527095 1514194.637 0.016806438 0.016310823 1.75E-07 6.756444563 0.036054845 LVLPSNT(ph)PNVR ddPTM_A459_MK2206_30min_R2 2 LVLPSNTPNVR 11 0 Q03188;H0Y8J2;H0Y9W1 Q03188 CENPC Centromere protein C 1 LVLPS(0.002)NT(0.998)PNVR;LVLPS(0.032)NT(0.968)PNVR 141.34 0.0023661 14084600 57060 71396 64295 66500 64863 60818 72226 43522 47696 68224 TRUE FALSE 61428.55747 67850.57846 66438.56321 61066.73728 62316.15271 63132.47161 62742.63944 49210.47483 51844.51187 65997.85647 0.930765948 1.028072457 1.006677592 0.925283646 0.944214798 0.956583668 0.950676928 0.745637472 0.78554842 1 16.01013155 -7.655986961 7.46054423 0.824846664 0.965961807 0.378999097 0.068943993 0.195483777 12.30987242 0.031724148 0.018173177 2.21E-08 7.655986961 0.141115143 LVLVNYPFIDVGLAGGAVPQS(ph)APPVPSGGSHFR ddPTM_A459_MK2206_30min_R1 1 LVLVNYPFIDVGLAGGAVPQSAPPVPSGGSHFR 33 0 P50548;P50548-2;M0QXN0 P50548 ERF ETS domain-containing transcription factor ERF 1 LVLVNYPFIDVGLAGGAVPQS(1)APPVPSGGSHFR 110.1 3.30E-14 6034000 937.29 732.56 790.55 956.27 1549.7 1353.2 1406.6 1240.6 715.75 663.34 TRUE FALSE 857.5685636 684.8702109 736.8896686 1029.922081 1487.972167 1429.817015 1312.76828 1229.753565 790.1547738 745.5195672 1.15029652 0.918648203 0.988424316 1.381482293 1.995886135 1.917879929 1.760877029 1.649525538 1.059871275 1 9.542102408 -5.916327023 4.091673132 1.629217984 1.012595955 0.362518326 0.314554401 0.211109293 6.734284792 0.092174828 0.140452294 1.21E-06 5.916327023 -0.616622029 LVNHFVEEFK ddPTM_A459_MK2206_30min_R1 2 LVNHFVEEFK 10 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 133.42 0.003195 28416000 21789.6 22367.8 23628.7 22005 20902.7 20645.6 21534.1 21511.4 20897.5 19745.6 FALSE TRUE 19936.2801 20911.65215 22024.84968 23699.82891 20070.1012 21814.53603 20097.59948 21323.3281 23069.86991 22191.834 0.898361086 0.942312932 0.992475416 1.067952694 0.904391282 0.982998342 0.905630399 0.960863717 1.039565721 1 14.43774128 LVNHFVEEFKR ddPTM_A459_MK2206_30min_R1 2 LVNHFVEEFKR 11 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 97.597 0.012876 18636800 16856.7 17290.3 17336.2 16492.8 18303 15717 18017.2 17370.1 15664.4 13895.6 FALSE TRUE 15422.94915 16164.69833 16159.46705 17763.07831 17573.95275 16606.88296 16815.30546 17218.23505 17292.77044 15617.09183 0.987568576 1.035064563 1.034729591 1.137412682 1.125302517 1.063378709 1.076724504 1.102525056 1.107297736 1 13.9308382 -5.593968136 6.852616446 1.091847091 1.016973777 0.412373502 0.037718222 0.1903038 14.7876988 0.010035665 0.017531553 2.55E-06 5.593968136 -0.074873314 LVNTTIT(ph)PEPEPKPQPNSR ddPTM_A459_MK2206_30min_R1 2 LVNTTITPEPEPKPQPNSR 19 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 LVNT(0.005)T(0.026)IT(0.969)PEPEPKPQPNSR;LVNT(0.002)T(0.021)IT(0.977)PEPEPKPQPNSR 166.01 9.52E-09 23945000 4122.3 3658.7 4372 3938.3 3773.1 3464.1 3546.4 3943.2 2966.5 2481.3 TRUE FALSE 3771.676738 3420.517965 4075.240821 4241.628548 3622.809437 3660.234348 3309.826127 3908.725018 3274.878291 2788.702177 1.352484596 1.226562662 1.461339563 1.521004496 1.299102309 1.312522498 1.186869704 1.401628704 1.174337768 1 11.44537815 -8.967530858 0.478860411 0.978199518 1.373812544 0.563547304 0.096119993 1.501431848 0.658373643 0.169484524 0.057223274 1.08E-09 8.967530858 0.395613026 LVNTTIT(ph)PEPEPKPQPNSR ddPTM_A459_MK2206_30min_R2 1 LVNTTITPEPEPKPQPNSR 19 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 LVNTTIT(0.999)PEPEPKPQPNSR 134.34 0.00028854 7613500 23399 28820 26137 22120 25625 25547 28035 20836 24237 29751 TRUE FALSE 25190.44543 27388.84071 27008.39453 20312.72524 24618.83374 26519.20899 24353.97082 23559.33674 26345.09045 28780.22731 0.875269162 0.951654774 0.938435762 0.70578752 0.855407898 0.921438483 0.846204951 0.818594533 0.915388547 1 14.81279037 -8.552357634 7.719562675 0.99999847 0.865304258 0.284846614 0.066442286 0.597426207 153.1913394 0.06752001 0.017456426 2.80E-09 8.552357634 -0.134694212 LVPIKPAPLPLS(ph)PGK ddPTM_A459_MK2206_30min_R2 1 LVPIKPAPLPLSPGK 15 1 A0A1B0GVH1;Q9BRW5;Q02086-2;Q02086 A0A1B0GVH1 SP2 Transcription factor Sp2 1 LVPIKPAPLPLS(1)PGK 63.436 0.039743 2273900 50231 26962 29215 27561 22710 17177 35460 29017 18881 42511 TRUE FALSE 54076.72398 25623.10629 30189.01352 25309.17814 21818.29129 17830.68277 30804.0594 32809.62153 20523.23525 41123.86955 1.314971684 0.623071383 0.734099535 0.615437662 0.530550542 0.433584752 0.749055469 0.797824278 0.499058952 1 15.3276884 -4.760016513 24.99231104 0.650268713 1.314972496 0.605226042 0.157153668 23.50061767 412636.4441 0.037877447 0.231008492 1.74E-05 4.760016513 0.664703784 LVPLLDTGDIIIDGGNSEYR ddPTM_A459_MK2206_30min_R1 1 LVPLLDTGDIIIDGGNSEYR 20 0 P52209-2;P52209;K7EM49;K7EMN2 P52209-2 PGD "6-phosphogluconate dehydrogenase, decarboxylating" 0 198.81 1.74E-14 67716000 2580.1 3136.4 2614.7 2787.5 2792.9 2811.7 2984.7 2798 1958.7 2521.4 FALSE TRUE 2360.648946 2932.21979 2437.221449 3002.193733 2681.652879 2970.896024 2785.596109 2773.537381 2162.313874 2833.770068 0.83304181 1.034741606 0.860063234 1.059434485 0.946319855 1.048389938 0.983000047 0.978744681 0.763051985 1 11.46850699 -1.523820942 0.003509909 1.330912231 0.565640902 0 0.094883586 2359082.278 644.6820666 66732.15648 74002.95989 0.029934986 1.523820942 -0.765271329 LVPS(ph)QEETK ddPTM_A459_MK2206_30min_R2 4 LVPSQEETK 9 0 P49321-4;P49321;P49321-3 P49321-4 NASP Nuclear autoantigenic sperm protein 1 LVPS(1)QEETK;LVPS(1)QEETK;LVPS(1)QEETK;LVPS(1)QEETK 112.94 0.0094044 46261700 397154 317508 348464 338631 310187 249261 364120 298059 236150 370050 TRUE FALSE 427560.4156 301741.0144 360081.6158 310963.7641 298007.4998 258746.802 316310.6066 337016.3347 256689.9001 357975.2988 1.194385247 0.842910154 1.005883973 0.868673803 0.832480623 0.722806302 0.883610148 0.941451368 0.71706037 1 18.44950052 -2.295794104 1.250969208 0.856443531 199.9972483 0.492283648 0.096526802 771.762508 2.654296982 0.027470951 439386.6609 0.005060645 2.295794104 199.1408048 LVPVS(ph)PLPPK ddPTM_A459_MK2206_30min_R1 2 LVPVSPLPPK 10 0 O95396 O95396 MOCS3 Adenylyltransferase and sulfurtransferase MOCS3;Molybdopterin-synthase adenylyltransferase;Molybdopterin-synthase sulfurtransferase 1 LVPVS(1)PLPPK;LVPVS(1)PLPPK 102.05 0.015706 48744000 17793.6 19903.6 19296.3 15186.1 16404.6 15041.1 16965.1 15626.4 13624.8 12507.1 TRUE FALSE 16280.16088 18607.87202 17986.52092 16355.73605 15751.17004 15892.71408 15833.38913 15489.78003 15041.14672 14056.57397 1.158188397 1.323784306 1.279580711 1.163564898 1.120555412 1.13062501 1.126404568 1.101959842 1.070043579 1 13.77895739 -6.719364879 0.34248805 1.007136044 1.304917674 0.697213966 0.049271849 1.139750011 0.27133948 0.061738979 0.126315511 1.91E-07 6.719364879 0.29778163 LVPVS(ph)PLPPK ddPTM_A459_MK2206_30min_R2 2 LVPVSPLPPK 10 0 O95396 O95396 MOCS3 Adenylyltransferase and sulfurtransferase MOCS3;Molybdopterin-synthase adenylyltransferase;Molybdopterin-synthase sulfurtransferase 1 LVPVS(1)PLPPK;LVPVS(1)PLPPK 101.39 0.016405 45709000 169578 203214 183218 186434 172713 164316 186119 145874 159643 183967 TRUE FALSE 182561.0221 193122.6883 189326.3967 171201.7458 165931.4198 170569.1605 161681.3517 164940.2327 173528.4596 177964.1719 1.0258302 1.085177349 1.063845575 0.962001194 0.93238666 0.958446629 0.908505066 0.926817072 0.975075251 1 17.4412273 -5.802503065 4.704965534 0.945285542 1.061729736 0.751134963 0.02798419 0.084440711 4.160793899 0.007706945 0.012153883 1.58E-06 5.802503065 0.116444194 LVQAFQFTDK ddPTM_A459_MK2206_30min_R1 2 LVQAFQFTDK 10 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5 Q06830 PRDX1 Peroxiredoxin-1 0 ; 175.93 0.00085363 45500000 6592.7 7257 7209.6 6768.2 6672.9 6820.9 6853.4 6952.6 5341.2 5597.5 FALSE TRUE 6031.956245 6784.567981 6720.232439 7289.487937 6407.104263 7207.093463 6396.222191 6891.814151 5896.436854 6290.960559 0.958829131 1.078462966 1.068236301 1.158724152 1.018461998 1.145626871 1.016732203 1.095510628 0.937287207 1 12.6190646 -8.259346994 24.99729702 0.9686436 1.070266576 0.313604144 0.058435332 199.866742 2387848.172 0.042113654 0.014070477 5.50E-09 8.259346994 0.101622976 LVQAFQYTDK ddPTM_A459_MK2206_30min_R1 1 LVQAFQYTDK 10 0 Q13162;H7C3T4 Q13162 PRDX4 Peroxiredoxin-4 0 199.46 0.0026957 44640000 3356 3546.1 3549.3 3417.3 3143.1 3782.6 3382.9 3661.9 3243 2476.5 FALSE TRUE 3070.554577 3315.248245 3308.383405 3680.501038 3017.903671 3996.767543 3157.232913 3629.884394 3580.121455 2783.307517 1.103203494 1.191118202 1.18865177 1.322347968 1.084286825 1.435977706 1.1343457 1.304162179 1.286283112 1 11.4425846 -4.632254122 1.313971462 1.235507075 1.011460606 0.068775061 0.120517838 4.398839907 5.252784609 0.032683131 1.453030762 2.33E-05 4.632254122 -0.224046469 LVQS(ph)PNSYFMDVK ddPTM_A459_MK2206_30min_R1 2 LVQSPNSYFMDVK 13 0 H0YMV8;Q71UM5;C9JLI6;P42677 H0YMV8;P42677 RPS27L;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like 1 LVQS(0.972)PNS(0.028)YFMDVK;LVQS(0.999)PNS(0.001)YFMDVK 134.14 0.0015762 14777000 3700.4 4160.3 3936.6 3590.2 3779.2 3494.1 3755.8 3791.6 3742.9 3323.7 TRUE FALSE 3385.661548 3889.463714 3669.39456 3866.717826 3628.666461 3691.932922 3505.257435 3758.450441 4131.987849 3735.465049 0.906356104 1.041226103 0.982312647 1.035136931 0.971409561 0.988346263 0.938372435 1.006153288 1.106150853 1 11.86707215 -8.013767193 24.37777746 1.054100995 0.984015619 0.292565706 0.04451674 548.7373878 971650.581 0.026214637 0.010822362 9.69E-09 8.013767193 -0.070085376 LVQS(ph)PNSYFMDVK ddPTM_A459_MK2206_30min_R2 1 LVQSPNSYFMDVK 13 0 H0YMV8;Q71UM5;C9JLI6;P42677 H0YMV8;P42677 RPS27L;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like 1 LVQS(0.999)PNS(0.001)YFMDVK 155.26 0.00036561 6822900 31267 43662 38812 44112 40666 34612 48372 36568 36010 40141 TRUE FALSE 33660.82556 41493.80857 40105.97271 40507.90849 39069.24851 35929.18391 42020.69829 41347.56316 39142.08471 38831.20246 0.866849941 1.068568727 1.032828503 1.043179349 1.006130278 0.925265808 1.082137447 1.064802544 1.008005991 1 15.24492876 -7.299029103 24.98935036 1.044136691 0.999053317 0.122593257 0.060014409 1337.276524 889006.9314 0.025034659 0.016878666 5.02E-08 7.299029103 -0.045083374 LVQSPNS(ph)YFMDVK ddPTM_A459_MK2206_30min_R1 1 LVQSPNSYFMDVK 13 0 H0YMV8;Q71UM5;C9JLI6;P42677 H0YMV8;P42677 RPS27L;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like 1 LVQS(0.009)PNS(0.955)Y(0.036)FMDVK 124.09 0.0018986 0 1077.8 1426.8 1071.6 1049.1 990.84 1167.6 1000.9 1167.6 1146.5 1126.7 TRUE FALSE 986.1274502 1333.915061 998.8627776 1129.901864 951.3727447 1233.708503 934.1317872 1157.391796 1265.682778 1266.284102 0.778756875 1.053408993 0.788814118 0.892297283 0.75131066 0.974274652 0.737695266 0.914006418 0.999525127 1 10.30638541 -8.112708499 4.138065199 0.99724832 0.85923702 0.267920146 0.095091817 0.313063191 8.810506733 0.066438462 0.023214111 7.71E-09 8.112708499 -0.138011301 LVRLS(ph)SDSFAR ddPTM_A459_MK2206_30min_R1 1 LVRLSSDSFAR 11 1 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 LVRLS(0.646)S(0.345)DS(0.009)FAR 77.372 0.02728 23311000 1297 1422.4 1226.7 1112 1598 1331.7 1354.5 1592.9 1109.9 886.66 TRUE FALSE 1186.683339 1329.801501 1143.435022 1197.646433 1534.348276 1407.099703 1264.143776 1578.973443 1225.278077 996.5061347 1.190843988 1.334463939 1.147444037 1.201845519 1.539727878 1.412033157 1.26857601 1.584509506 1.229574043 1 9.960734876 -4.75805699 24.16178417 1.322145582 1.190843701 0.025602397 0.168706285 224.8415874 1605731.389 0.041254318 0.28839933 1.75E-05 4.75805699 -0.131301881 LVRLS(ph)SDSFAR ddPTM_A459_MK2206_30min_R2 2 LVRLSSDSFAR 11 1 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 LVRLS(0.641)S(0.35)DS(0.009)FAR;LVRLS(0.794)S(0.204)DS(0.002)FAR 97.203 0.010709 23741000 21107.6 21974.5 21310.8 24884.9 30435 29639 33369 19634.9 35033 24401.7 TRUE FALSE 22723.61408 20883.27828 22021.29144 22851.72407 29239.96898 30766.93291 28987.61022 22201.24885 38080.10701 23605.47453 0.962641698 0.884679453 0.932889166 0.968068828 1.238694394 1.303381251 1.228003707 0.940512711 1.613189643 1 14.52683386 -6.211103801 4.537127749 1.222747935 0.927898599 0.398554217 0.170938291 0.215205476 9.747502808 0.049252215 0.06319581 6.15E-07 6.211103801 -0.294849337 LVS(ph)PEPPPK ddPTM_A459_MK2206_30min_R2 3 LVSPEPPPK 9 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 LVS(1)PEPPPK;LVS(1)PEPPPK;LVS(1)PEPPPK 117.71 0.0074468 32287300 370436 398483 358144 377270 318685 306829 363862 310745 301244 369810 TRUE FALSE 398796.865 378694.9137 370084.3422 346445.8342 306171.8256 318505.5926 316086.4823 351360.4384 327445.6586 357743.13 1.114757578 1.058566558 1.034497412 0.968420649 0.855842642 0.890319243 0.8835571 0.982158451 0.915309425 1 18.44856454 -5.704798076 2.009005005 0.916690252 1.085729243 0.704896774 0.043408518 0.177331045 1.453545182 0.013434267 0.02807105 1.97E-06 5.704798076 0.169038991 LVS(ph)PETEASEESLQFNLEKPATGER ddPTM_A459_MK2206_30min_R1 1 LVSPETEASEESLQFNLEKPATGER 25 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 LVS(0.663)PET(0.29)EAS(0.047)EESLQFNLEKPATGER 117.96 4.27E-08 10258000 936.62 1029.8 1257.6 1068.5 995.04 1063.2 1197.2 969.38 829.59 1147.3 TRUE FALSE 856.9555506 962.7598328 1172.237616 1150.796055 955.4054498 1123.397465 1117.336972 960.9048129 915.8288492 1289.436186 0.664597101 0.746651787 0.90910867 0.892480037 0.740948222 0.871231533 0.866531423 0.745213159 0.710255272 1 10.33252466 -11.9570062 2.395086392 3.187674772 0.800388719 0.365112046 0.081069709 8792124.974 1140718.798 107691568.4 0.021192455 1.10E-12 11.9570062 -2.387286053 LVS(ph)PGSANETSSILVESVTR ddPTM_A459_MK2206_30min_R1 4 LVSPGSANETSSILVESVTR 20 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 LVS(0.998)PGS(0.002)ANETSSILVESVTR;LVS(1)PGSANETSSILVESVTR;LVS(1)PGSANETSSILVESVTR;LVS(1)PGSANETSSILVESVTR 237.16 6.41E-30 399029000 15135.5 14301.4 14215 11705.6 15783.2 14764.6 15938.1 14083.3 13686.6 12842.8 TRUE FALSE 13848.14625 13370.37626 13250.12541 12607.16734 15154.52172 15600.55889 14874.89843 13960.17119 15109.37105 14433.86302 0.95942065 0.926320018 0.917988856 0.873443743 1.049928332 1.080830466 1.030555604 0.967181909 1.046800224 1 13.81716985 -6.269962553 24.97192572 1.030222883 0.919702048 0.709408069 0.034461678 360.1173147 1055100.757 0.01134064 0.013065648 5.37E-07 6.269962553 -0.110520835 LVS(ph)PGSANETSSILVESVTR ddPTM_A459_MK2206_30min_R2 7 LVSPGSANETSSILVESVTR 20 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 LVS(0.994)PGS(0.006)ANETSSILVESVTR;LVS(0.978)PGS(0.022)ANETSSILVESVTR;LVS(0.992)PGS(0.008)ANETSSILVESVTR;LVS(1)PGSANETSSILVESVTR;LVS(0.999)PGS(0.001)ANETSSILVESVTR;LVS(0.998)PGS(0.001)ANETSSILVESVTR;LVS(0.795)PGS(0.204)ANETSSILVESVTR 237.09 6.45E-30 265270200 243888.8 258562.3 259148.5 301735.2 281487 291071.1 318389.7 220536.7 259795 253184.8 TRUE FALSE 262561.114 245722.4722 267788.3816 277082.469 270434.406 302148.0147 276584.7499 249361.6039 282391.4995 244923.4007 1.072013182 1.003262536 1.09335564 1.131302555 1.104159118 1.233642901 1.129270413 1.018120781 1.152978844 1 17.90197109 -5.450452291 5.412505644 1.116205489 1.038474841 0.159676011 0.064186601 0.351999567 18.77138072 0.016971808 0.035714887 3.54E-06 5.450452291 -0.077730648 LVSFHDDS(ph)DEDLLHI ddPTM_A459_MK2206_30min_R1 6 LVSFHDDSDEDLLHI 15 0 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor 1 LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI 192.32 1.97E-05 35777100 8418.86 5424.44 6494.13 5183.51 12807.98 10668.02 11708.24 9676.1 6592.36 6895.57 TRUE FALSE 7702.791748 5071.30797 6053.326549 5582.744838 12297.81104 11272.03407 10927.20467 9591.502878 7277.659413 7749.84527 0.993928456 0.654375383 0.781089988 0.720368555 1.586846009 1.454485048 1.409990044 1.237637984 0.939071576 1 12.91995179 -6.244793538 24.74262973 1.299310255 0.777482272 0.577482774 0.20185326 504.8010677 750343.6495 0.06135772 0.078974048 5.69E-07 6.244793538 -0.521827982 LVSFHDDS(ph)DEDLLHI ddPTM_A459_MK2206_30min_R2 3 LVSFHDDSDEDLLHI 15 0 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor 1 LVSFHDDS(1)DEDLLHI;LVS(0.001)FHDDS(0.999)DEDLLHI;LVSFHDDS(1)DEDLLHI 109.55 0.0024597 3434900 16219.7 25588.3 21555.5 33803 29555.1 34797 34910 21329.8 36489 25167.7 TRUE FALSE 17461.4927 24317.62223 22274.14961 31041.18677 28394.61827 36121.22422 30326.27507 24117.6781 39662.74726 24346.48001 0.717208101 0.998814704 0.914881724 1.274976373 1.166272014 1.483632303 1.245612304 0.990602259 1.629095756 1 14.57142558 -5.505687188 1.292164172 1.270107517 0.785170185 0.436136062 0.195611412 0.509545442 1.520232823 0.061245919 0.230955344 3.12E-06 5.505687188 -0.484937331 LVSPET(ph)EASEESLQFNLEKPATGER ddPTM_A459_MK2206_30min_R1 1 LVSPETEASEESLQFNLEKPATGER 25 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 LVS(0.221)PET(0.389)EAS(0.389)EESLQFNLEKPATGER 149.09 9.60E-10 7566500 914.44 995.81 1160.1 941.41 988.49 1135.4 1006 879.48 1254.8 1039.1 TRUE FALSE 836.6620761 930.982588 1081.355644 1013.917561 949.1163501 1199.685367 938.8915756 871.7907991 1385.24095 1167.831553 0.716423592 0.797189103 0.925951728 0.868205315 0.812716824 1.027276035 0.803961473 0.746503892 1.186165031 1 10.18961648 -1.522878745 0.14232523 1.034829552 0.077194953 0.285282773 0.117481718 112.1331549 1.063082169 0.48476547 21.90959618 0.03 1.522878745 -0.957634599 LVSPET(ph)EASEESLQFNLEKPATGER ddPTM_A459_MK2206_30min_R2 1 LVSPETEASEESLQFNLEKPATGER 25 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 LVS(0.309)PET(0.523)EAS(0.158)EES(0.01)LQFNLEKPATGER 54.12 0.020212 2085200 4028.9 5126.4 4506.4 3344.2 5208.9 5024.9 2742.5 4148.3 2573.4 5620.5 TRUE FALSE 4337.355682 4871.83043 4656.641127 3070.968162 5004.372413 5216.126091 2382.406456 4690.497053 2797.22968 5437.103545 0.797732772 0.896034146 0.856456216 0.564816935 0.92041146 0.959357505 0.438175664 0.862683047 0.514470555 1 12.40862259 -7.209188457 24.99996448 0.69238664 0.828279286 0.108449003 0.17924966 728.6544606 348631.8726 0.065407217 0.050664161 6.18E-08 7.209188457 0.135892645 LVSPGS(ph)ANETSSILVESVTR ddPTM_A459_MK2206_30min_R1 2 LVSPGSANETSSILVESVTR 20 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 LVSPGS(1)ANETSSILVESVTR;LVS(0.002)PGS(0.998)ANETSSILVESVTR 239.56 4.72E-30 14784800 1932.01 1929.47 1821.64 1294.52 1893.33 1653.86 1557.32 1466.85 1336.13 1221.34 TRUE FALSE 1767.682404 1803.861152 1697.992152 1394.224155 1817.914657 1747.500124 1453.434024 1454.025485 1475.025495 1372.64882 1.287789257 1.314146143 1.237018622 1.01571803 1.32438438 1.273086094 1.058853512 1.059284403 1.074583297 1 10.42274686 -7.269401982 24.08640593 1.053120642 1.238531581 0.563548116 0.083492559 314.4080381 951060.0801 0.036552681 0.025180773 5.38E-08 7.269401982 0.185410938 LVSPGS(ph)ANETSSILVESVTR ddPTM_A459_MK2206_30min_R2 2 LVSPGSANETSSILVESVTR 20 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 LVSPGS(0.986)ANET(0.006)S(0.006)S(0.002)ILVESVTR;LVS(0.014)PGS(0.982)ANET(0.003)S(0.001)SILVESVTR 191.22 1.51E-15 8177600 12274.3 13199.7 12026.3 14120.4 13792 11503.6 14768.3 9274.7 17110.1 10525.7 TRUE FALSE 13214.02985 12544.22209 12427.25084 12966.71815 13250.45678 11941.37756 12829.20447 10486.93513 18598.30557 10182.24727 1.297751812 1.231969894 1.22048213 1.273463294 1.301329307 1.172764444 1.259958055 1.02992344 1.826542322 1 13.31376839 LVTSGAESGNLNT(ph)SPSSNQTR ddPTM_A459_MK2206_30min_R1 2 LVTSGAESGNLNTSPSSNQTR 21 0 Q8NHV4-2;Q8NHV4;Q8NHV4-3 Q8NHV4-2 NEDD1 Protein NEDD1 1 LVTSGAESGNLNT(0.942)S(0.034)PS(0.012)S(0.012)NQTR;LVTSGAESGNLNT(0.997)S(0.002)PSSNQTR 277.64 2.21E-72 54189000 5992.2 5542.2 6217.9 4835.6 6278.5 5203.7 6016.3 5432.6 4912.4 5319.3 TRUE FALSE 5482.531924 5181.401773 5795.846272 5208.03875 6028.41405 5498.328997 5614.963604 5385.103351 5423.061559 5978.295043 0.917072825 0.866702251 0.969481471 0.871157866 1.008383495 0.919715229 0.939224907 0.900775775 0.907125112 1 12.54551838 -5.254076079 24.99404469 0.935244602 0.89188754 0.159618536 0.042809159 1050.731629 3566595.789 0.010348908 0.026144641 5.57E-06 5.254076079 -0.043357061 LVTSGAESGNLNT(ph)SPSSNQTR ddPTM_A459_MK2206_30min_R2 1 LVTSGAESGNLNTSPSSNQTR 21 0 Q8NHV4-2;Q8NHV4;Q8NHV4-3 Q8NHV4-2 NEDD1 Protein NEDD1 1 LVTSGAESGNLNT(0.653)S(0.209)PS(0.069)S(0.069)NQTR 324.71 2.18E-136 44773000 55402 63281 48668 57184 63115 57076 59800 59242 54143 56107 TRUE FALSE 59643.61972 60138.55756 50290.56683 52511.88428 60636.78797 59248.06718 51948.18817 66985.13281 58852.26027 54276.23318 1.098890181 1.10800905 0.926567005 0.967493159 1.117188582 1.091602414 0.957107469 1.234152204 1.084309961 1 15.72803298 -6.277027158 24.82504113 1.086797198 1.024103869 0.090060539 0.085071075 1786.008685 2844386.306 0.027303983 0.031070762 5.28E-07 6.277027158 -0.062693329 LVTSGAESGNLNTS(ph)PSSNQTR ddPTM_A459_MK2206_30min_R2 1 LVTSGAESGNLNTSPSSNQTR 21 0 Q8NHV4-2;Q8NHV4;Q8NHV4-3 Q8NHV4-2 NEDD1 Protein NEDD1 1 LVTSGAESGNLNT(0.061)S(0.59)PS(0.298)S(0.05)NQT(0.001)R 143.23 9.81E-06 20954000 22670 28788 28066 24935 22733 25204 31231 24945 22241 26179 TRUE FALSE 24405.63263 27358.42978 29001.70643 22897.73074 21840.3882 26163.15588 27130.33218 28205.39715 24175.48198 25324.78137 0.963705561 1.080302703 1.145190792 0.904163017 0.862411717 1.033104906 1.07129581 1.113746916 0.954617598 1 14.62826219 -10.13181076 15.29000903 1.000030124 1.017524498 0.001163119 0.087405492 0 0 0.090840148 0.022031972 7.38E-11 10.13181076 0.017494374 LVTSGAESGNLNTSPS(ph)SNQTR ddPTM_A459_MK2206_30min_R2 3 LVTSGAESGNLNTSPSSNQTR 21 0 Q8NHV4-2;Q8NHV4;Q8NHV4-3 Q8NHV4-2 NEDD1 Protein NEDD1 1 LVTSGAESGNLNT(0.001)S(0.084)PS(0.888)S(0.028)NQTR;LVTSGAESGNLNTS(0.017)PS(0.726)S(0.256)NQTR;LVTSGAESGNLNT(0.05)S(0.169)PS(0.57)S(0.211)NQT(0.001)R 314.29 1.04E-199 48721000 90662 101241.6 95741 117956 100993 108238 110701 82085.4 84570.5 98957 TRUE FALSE 97603.15243 96214.08936 98932.95716 108318.6175 97027.50737 112357.0729 96165.82572 92814.24362 91926.28922 95728.04119 1.019587899 1.005077386 1.033479385 1.131524432 1.013574561 1.173711188 1.004573211 0.969561713 0.960285911 1 16.54665397 -7.510411516 24.88811794 0.976367757 1.062200197 0.372360641 0.051353814 618.9108912 1235529.637 0.02275278 0.014451256 3.09E-08 7.510411516 0.08583244 LVTSIGDVVNHDPVVGDR ddPTM_A459_MK2206_30min_R2 1 LVTSIGDVVNHDPVVGDR 18 0 P11216;H0Y4Z6 P11216 PYGB "Glycogen phosphorylase, brain form;Alpha-1,4 glucan phosphorylase" 0 113.86 0.0032719 0 4273.8 5578.8 4963.5 8048.8 5883 5455.6 6148.7 5199.5 5065.1 6488.4 FALSE TRUE 4601.005414 5301.764904 5128.980613 7391.187293 5652.00386 5663.216681 5341.368304 5879.092503 5505.653242 6276.684039 0.733031229 0.844676086 0.817148128 1.177562427 0.900476083 0.902262508 0.850985691 0.936655799 0.877159533 1 12.61578687 -5.556883691 24.99999947 0.943092199 0.799367526 0.371706556 0.090013057 201.0158163 147783.3422 0.024901151 0.043130293 2.77E-06 5.556883691 -0.143724673 LVVPAS(ph)QCGSLIGK ddPTM_A459_MK2206_30min_R2 2 LVVPASQCGSLIGK 14 0 H3BRU6;F8VZX2;F8W0G4;J3QT27;E9PFP8;P57721-2;P57721-3;P57721-5;P57721-4;P57721;F8VXH9;F8W1G6;H3BND9;Q15366;Q15366-2;Q15366-6;Q15366-3;Q15366-5;Q15366-8;Q15366-4;Q15366-7 H3BRU6;Q15366;Q15366-5 PCBP2;PCBP3 Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 1 LVVPAS(1)QCGSLIGK;LVVPAS(1)QCGSLIGK 144.18 0.00053187 7662600 51666 71552 52088 73136 64717 61016 81616 57590 47184 55764 TRUE FALSE 55621.58868 67998.83173 53824.58792 67160.55485 62175.8854 63338.00664 70899.72116 65117.21074 51287.97903 53944.42525 1.031090579 1.260534919 0.997778504 1.244995281 1.152591489 1.174134423 1.314310438 1.207116592 0.950755871 1 15.71918626 -8.262493376 24.99035387 0.975377913 1.17640006 0.418420746 0.093033188 87.53188298 2075242.708 0.072705798 0.022842262 5.46E-09 8.262493376 0.201022147 LVVS(ph)SPTSPK ddPTM_A459_MK2206_30min_R2 1 LVVSSPTSPK 10 0 Q9Y4G2 Q9Y4G2 PLEKHM1 Pleckstrin homology domain-containing family M member 1 1 LVVS(0.477)S(0.477)PT(0.028)S(0.018)PK 117.52 0.0044705 0 26210 37241 26003 40969 39039 42707 32015 23216 36079 32798 TRUE FALSE 28216.65775 35391.66609 26869.92704 37621.70165 37506.1327 44332.24481 27811.39204 26250.41091 39217.0862 31727.80395 0.889335354 1.115477962 0.846888965 1.185764439 1.182121926 1.397267989 0.87656215 0.827362995 1.236047924 1 14.95346005 -4.752774994 24.00079283 1.07245161 0.889334769 0.089229621 0.177075393 565.3445093 1565832.331 0.045726572 0.509919347 1.77E-05 4.752774994 -0.18311684 LVVSS(ph)PTSPK ddPTM_A459_MK2206_30min_R1 1 LVVSSPTSPK 10 0 Q9Y4G2 Q9Y4G2 PLEKHM1 Pleckstrin homology domain-containing family M member 1 1 LVVS(0.184)S(0.813)PT(0.003)SPK 108.43 0.0078702 0 2527.2 2970.1 3064 2669 2294.2 2523.4 2231.6 2554.2 2326 2227.3 TRUE FALSE 2312.248369 2776.74595 2856.024217 2874.566842 2202.817156 2666.272727 2082.734036 2531.868899 2567.796024 2503.234739 0.923704171 1.109263109 1.140933438 1.148340904 0.879988249 1.065130923 0.832017071 1.011438863 1.025791143 1 11.28957787 -6.253685759 24.97930755 0.967584279 1.086922957 0.281370846 0.08703889 749.0479783 2413156.305 0.02565045 0.032487587 5.58E-07 6.253685759 0.119338677 LVVSSPT(ph)SPK ddPTM_A459_MK2206_30min_R1 1 LVVSSPTSPK 10 0 Q9Y4G2 Q9Y4G2 PLEKHM1 Pleckstrin homology domain-containing family M member 1 1 LVVSS(0.01)PT(0.595)S(0.394)PK 141.1 0.0031483 7760400 4297.9 5334.7 5060.6 4521.6 2782.9 2836.5 4200.7 4303.9 4668.9 4632.1 TRUE FALSE 3932.341036 4987.41006 4717.100572 4869.854415 2672.0512 2997.100179 3920.478968 4266.271456 5154.248863 5205.959519 0.755353748 0.95801937 0.906096283 0.935438395 0.513267764 0.575705625 0.753075193 0.819497624 0.990067027 1 12.34594838 -10.65907413 11.41547624 1.000000004 0.796490153 0.135006893 0.150980445 2.25E-10 0 0.161109794 0.039074865 2.19E-11 10.65907413 -0.20350985 LVY(ph)LT(ph)S(ph)ILEVLTRDLMEQCS(ph)NMQPK ddPTM_A459_MK2206_30min_R2 1 LVYLTSILEVLTRDLMEQCSNMQPK 25 1 F8W1K6;B4DHQ7;O60486 F8W1K6 PLXNC1 Plexin-C1 4 LVY(0.985)LT(0.985)S(0.901)ILEVLT(0.303)RDLMEQCS(0.826)NMQPK 43.198 0.044559 0 1656.3 3798.3 3557.8 3049.1 3388.3 2809.8 4987.5 3173.1 1607.1 3957.9 TRUE FALSE 1783.107601 3609.681945 3676.415276 2799.978776 3255.258317 2916.728908 4332.635259 3587.835065 1746.882653 3828.754047 0.465714846 0.942782404 0.96021192 0.731302858 0.850213484 0.761795841 1.131604487 0.937076402 0.456253557 1 11.90265927 LVY(ph)VFS(ph)QIRAS(ph)AMS(ph)PR ddPTM_A459_MK2206_30min_R2 1 LVYVFSQIRASAMSPR 16 1 E7EX59 E7EX59 PCCB 4 LVY(1)VFS(1)QIRAS(1)AMS(1)PR 52.254 0.033729 2927600 468.58 0 1277 2224.6 0 476.22 1163.3 0 1160.6 1067.2 TRUE FALSE 504.4548451 0 1319.574543 2042.843064 0 494.3428858 1010.557313 0 1261.54689 1032.377351 0.488634165 0 1.278190132 1.978775552 0 0.478839336 0.97886428 0 1.221982339 1 10.01175468 LWNPQEK ddPTM_A459_MK2206_30min_R1 1 LWNPQEK 7 0 Q13033-2;Q13033 Q13033-2 STRN3 Striatin-3 0 90.777 0.041033 221810000 25226 10127 12232 23772 14217 23167 13642 12045 7067.9 7051 FALSE TRUE 23080.39623 9467.730459 11401.72592 25602.92356 13650.70679 24478.69552 12731.96707 11939.69183 7802.633498 7924.531112 2.912525158 1.194736991 1.438788713 3.23084397 1.722588579 3.088977149 1.606652418 1.506674864 0.984617687 1 12.95210986 -7.748622885 2.224034198 1.069997057 2.198264513 0.359049071 0.661663507 0.375805476 3.685199195 0.445942513 0.191396673 1.78E-08 7.748622885 1.128267456 LWPTFFER ddPTM_A459_MK2206_30min_R1 1 LWPTFFER 8 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 147.34 0.023872 10799000 2280.3 2486.7 2052.5 1826 2087.8 2009.7 2320.9 1637.5 1930.5 2553.7 FALSE TRUE 2086.348511 2324.815378 1913.182019 1966.638836 2004.638505 2123.487477 2166.076996 1623.18351 2131.182383 2870.071635 0.726932556 0.810019983 0.666597305 0.685222909 0.698462882 0.73987264 0.754711823 0.565555051 0.742553725 1 11.48687103 -11.78259489 1.868558443 1.891014099 0.708536071 0.667144946 0.061446044 1547794.632 230284.5213 5810997.783 0.016015548 1.65E-12 11.78259489 -1.182478028 LWPTFFER ddPTM_A459_MK2206_30min_R2 1 LWPTFFER 8 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 135.77 0.036525 2581900 6936.1 6934.7 5206.2 7040.2 6849.1 5673.1 7492.8 6546.2 3851.5 6494.2 FALSE TRUE 7467.133149 6590.332882 5379.77211 6464.99314 6580.16992 5888.993796 6508.98636 7401.810816 4186.496508 6282.294786 1.188599613 1.049032735 0.856338694 1.029081468 1.04741502 0.93739533 1.036084199 1.178201767 0.666396062 1 12.61707593 -4.86039103 3.783213095 0.979984093 1.194072357 0.21018681 0.128775371 0.370034834 8.864004326 0.030906712 0.187689908 1.38E-05 4.86039103 0.214088264 LWPTFFERPLVR ddPTM_A459_MK2206_30min_R1 1 LWPTFFERPLVR 12 1 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 101.3 0.017555 0 1098.6 1066.9 1277.5 1076.6 1280.4 1066.9 981.09 890.04 951.14 621.48 FALSE TRUE 1005.158301 997.4446161 1190.786859 1159.519919 1229.398957 1127.306956 915.6432762 882.2584741 1050.014407 698.4736343 1.439078373 1.428034742 1.70484153 1.660076861 1.76012221 1.61395778 1.310920314 1.263123518 1.503298557 1 9.448061848 -8.481498253 0.596155003 1.017570147 1.601962477 0.577800861 0.143682227 0.670310128 0.565356517 0.164763508 0.07261715 3.30E-09 8.481498253 0.584392331 LWSNSHRPELVR ddPTM_A459_MK2206_30min_R1 1 LWSNSHRPELVR 12 1 P52895;B4DK69;S4R3P0;P52895-2 P52895 AKR1C2 Aldo-keto reductase family 1 member C2 0 73.632 0.042722 8685600 1249.6 718.09 1199 611.32 1009.7 1384.7 1311.8 868.32 980.06 1187.1 FALSE TRUE 1143.314958 671.3422105 1117.615221 658.4039723 969.4815109 1463.100517 1224.292216 860.7283698 1081.940744 1334.16691 0.856950468 0.503192071 0.837687708 0.493494455 0.72665684 1.096639788 0.917645466 0.645142945 0.810948567 1 10.38172345 -6.53835794 24.98161095 0.877623112 0.664687795 0.31239075 0.156627154 306.1765953 494129.8952 0.051587343 0.051603111 2.89E-07 6.53835794 -0.212935317 LY(ph)TLVTY(ph)VPVT(ph)T(ph)FKS(ph)K ddPTM_A459_MK2206_30min_R2 1 LYTLVTYVPVTTFKSK 16 1 P62899-3 P62899-3 RPL31 60S ribosomal protein L31 5 LY(0.548)T(0.448)LVT(0.467)Y(0.555)VPVT(0.984)T(0.998)FKS(1)K 46.663 0.042735 958320000 27178 48527 30841 34315 28236 24540 35988 28849 31126 36208 TRUE FALSE 29258.76858 46117.21974 31869.22355 31511.35473 27127.31277 25473.8869 31262.73237 32619.66335 33833.28322 35026.53593 0.835331494 1.316636616 0.909859417 0.89964234 0.774478893 0.727273943 0.892544225 0.93128431 0.965932894 1 15.09616069 -5.495181771 24.63738977 0.873405855 1.085300109 0.242228466 0.132715426 697.7403639 620661.9607 0.033636783 0.069726215 3.20E-06 5.495181771 0.211894255 LYDSS(ph)PSR ddPTM_A459_MK2206_30min_R1 1 LYDSSPSR 8 0 E9PP00;Q9C0D7;Q9C0D7-2 E9PP00 ZC3H12C Probable ribonuclease ZC3H12C 1 LYDS(0.222)S(0.775)PS(0.002)R 112.11 0.011314 7846400 3562.9 3794.9 3787.6 3634.6 3261.5 3577.2 4328.7 3974.1 3574.9 3477.9 TRUE FALSE 3259.856645 3547.85132 3530.508265 3914.537522 3131.587549 3779.737973 4039.940321 3939.354863 3946.523648 3908.768509 0.833985599 0.907664732 0.90322777 1.001475916 0.801169868 0.966989466 1.033558348 1.007825061 1.009659088 1 11.93249843 -6.991940564 24.99329672 1.011535749 0.896154956 0.578232482 0.049797148 140.1354027 434574.6837 0.017242484 0.015180888 1.02E-07 6.991940564 -0.115380793 LYDSS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 LYDSSPSR 8 0 E9PP00;Q9C0D7;Q9C0D7-2 E9PP00 ZC3H12C Probable ribonuclease ZC3H12C 1 LYDS(0.088)S(0.906)PS(0.006)R;LYDS(0.086)S(0.794)PS(0.12)R 90.601 0.028038 11150900 101333 117770 107523 137776 134407 152328 126700 111892 135634 126919 TRUE FALSE 109091.1324 111921.7131 111107.7632 126519.2601 129129.5058 158124.9488 110064.1378 126516.6686 147431.2001 122777.6434 0.888526033 0.911580561 0.904951097 1.030474739 1.051734683 1.28789692 0.896450972 1.030453632 1.200798419 1 16.90568836 -5.866019483 2.611516331 1.079690227 0.898543396 0.379439561 0.100766011 0.300320309 4.152080997 0.030515243 0.050819943 1.36E-06 5.866019483 -0.181146831 LYEALT(ph)PVH ddPTM_A459_MK2206_30min_R1 3 LYEALTPVH 9 0 G5E9W3;Q9UKF6 G5E9W3 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 1 LYEALT(1)PVH;LYEALT(1)PVH;LYEALT(1)PVH 131.62 0.0083264 23901300 17198.4 17154.3 16871.3 14298.5 17693 15920.1 18067.6 17036.2 13973.4 12977.6 TRUE FALSE 15735.58577 16037.55195 15726.12316 15399.77295 16988.25034 16821.4823 16862.34337 16887.2543 15425.98493 14585.36306 1.078861438 1.099564809 1.078212664 1.055837478 1.164746484 1.153312552 1.156114064 1.157822005 1.057634621 1 13.83223368 -6.250656418 24.88256493 1.126806891 1.079657618 0.085089198 0.050787814 1210.345473 2792965.197 0.01451977 0.018529998 5.61E-07 6.250656418 -0.047149273 LYEALT(ph)PVH ddPTM_A459_MK2206_30min_R2 2 LYEALTPVH 9 0 G5E9W3;Q9UKF6 G5E9W3 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 1 LYEALT(1)PVH;LYEALT(1)PVH 99.815 0.043197 9930500 50016 57592 47018 60453 55616 58112 60151 47357 48318 53137 TRUE FALSE 53845.26342 54732.06503 48585.55665 55513.79652 53432.23639 60323.49288 52253.10145 53546.7225 52520.6123 51403.14404 1.047509144 1.064761038 0.945186478 1.079968892 1.03947409 1.173537028 1.016535125 1.04170131 1.021739298 1 15.64956898 LYHS(ph)LGPVTR ddPTM_A459_MK2206_30min_R2 1 LYHSLGPVTR 10 0 Q86X27 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 LYHS(1)LGPVTR 86.699 0.022948 8866300 24588 30589 24916 26969 24151 30637 29192 24271 21129 25020 TRUE FALSE 26470.47618 29069.99474 25746.687 24765.54643 23202.71039 31802.9125 25359.05533 27443.30303 22966.76223 24203.59945 1.093658662 1.201060809 1.063754466 1.023217496 0.958647099 1.313974501 1.04773901 1.13385214 0.948898625 1 14.56293399 -8.262630654 24.97251483 0.974449301 1.103870199 0.234618909 0.093943224 159.0199439 3333290.499 0.076213535 0.023829969 5.46E-09 8.262630654 0.129420898 LYKS(ph)EPELTTVAEVDESNGEEK ddPTM_A459_MK2206_30min_R1 1 LYKSEPELTTVAEVDESNGEEK 22 1 A0JP02;B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6 A0JP02 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 LY(0.058)KS(0.542)EPELT(0.347)T(0.053)VAEVDESNGEEK 69.726 0.0024706 11449000 1941.1 2640.9 2158.9 1773.8 1387.8 1294.2 1940.3 1541.8 2248.9 2819.6 TRUE FALSE 1775.999252 2468.97693 2012.359883 1910.418383 1332.520987 1367.476486 1810.866127 1528.320205 2482.681203 3168.913335 0.560444248 0.779124157 0.63503153 0.602862301 0.420497769 0.431528521 0.571447034 0.482285264 0.783448754 1 11.62977249 -8.51583508 3.712091207 0.99902116 0.563993582 0.667601512 0.0993095 0.12793337 4.758308662 0.1072399 0.028217598 3.05E-09 8.51583508 -0.435027578 LYKSEPELT(ph)TVAEVDESNGEEK ddPTM_A459_MK2206_30min_R1 1 LYKSEPELTTVAEVDESNGEEK 22 1 A0JP02;B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6 A0JP02 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 LYKS(0.272)EPELT(0.569)T(0.159)VAEVDESNGEEK 101.04 0.00017265 10167000 1772.8 1555.5 1745.3 1355.1 1068.8 1006.9 1688.8 1066.7 1939.9 1955.3 TRUE FALSE 1622.014051 1454.236667 1626.833899 1459.470037 1026.227433 1063.909808 1576.143233 1057.373954 2141.559547 2197.537326 0.738105347 0.661757436 0.740298642 0.664138907 0.466989762 0.484137309 0.71723161 0.481163137 0.974527041 1 11.10167195 -8.277615028 23.53266908 0.987263867 0.619867347 0.677764037 0.101506639 259.5049468 377525.593 0.101223709 0.026542411 5.28E-09 8.277615028 -0.36739652 LYLEFMFDDMMR ddPTM_A459_MK2206_30min_R2 1 LYLEFMFDDMMR 12 0 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70 A0A6E1WJ75 LDB1 LIM domain-binding protein 1 0 83.647 0.012721 0 12991 14514 13824 23948 13482 11930 13622 13522 12209 15230 FALSE TRUE 13985.60095 13793.25587 14284.88526 21991.37179 12952.62894 12384.00451 11833.41504 15289.37183 13270.91675 14733.04635 0.949267424 0.936212073 0.969581234 1.49265612 0.879154836 0.840559666 0.803188611 1.037760384 0.900758502 1 13.84676815 LYNNHEIR ddPTM_A459_MK2206_30min_R1 2 LYNNHEIR 8 0 O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 ; 154.12 0.0010722 16733600 7814.7 8081.4 8618.7 7121.6 8605.1 8089.1 8814.4 7339 6228.4 6285 FALSE TRUE 7150.018728 7555.299391 8033.686657 7670.106866 8262.340645 8547.097852 8226.407459 7274.835897 6875.864469 7063.633249 1.01222961 1.069605276 1.137330659 1.085858594 1.169701251 1.210014386 1.164614182 1.029900002 0.973417535 1 12.78619472 -7.919101949 4.948705841 0.990848961 1.123499541 0.522346984 0.05358957 0.175963773 7.541092746 0.034614995 0.015864177 1.20E-08 7.919101949 0.13265058 LYNNHEIR ddPTM_A459_MK2206_30min_R2 4 LYNNHEIR 8 0 O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 ;;; 129.42 0.0057317 25708500 138785 162145 149500 165217 160074 153720 172371 127499 146905 143512 FALSE TRUE 149410.4863 154093.1151 154484.2554 151718.2426 153788.6905 159569.9223 149738.4806 144163.5571 159682.5314 138829.2152 1.076217899 1.109947318 1.112764739 1.092840886 1.107754519 1.14939728 1.078580473 1.03842377 1.150208414 1 17.08295167 -11.80704282 2.499240197 0.481126807 1.101121026 0.47933187 0.031820434 3104629.093 2814814.622 10134503.62 0.007942782 1.56E-12 11.80704282 0.619994219 LYNSEESRPYT(ph)NK ddPTM_A459_MK2206_30min_R2 1 LYNSEESRPYTNK 13 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 LYNS(0.001)EES(0.004)RPYT(0.995)NK 145.49 0.0064846 21428000 26021 32016 20944 18659 28864 23120 25395 23413 25355 13081 TRUE FALSE 28013.18777 30426.132 21642.26251 17134.50001 27730.65433 23999.8478 22060.606 26473.15949 27560.33207 12654.16804 2.213751839 2.40443559 1.710287269 1.354059781 2.191424536 1.896596262 1.743347008 2.092050572 2.177964761 1 13.62732504 -11.11806478 2.983687394 0.940428578 1.963057467 0.498746399 0.293274436 106070025.2 114592373.1 49856216.03 0.08050685 7.62E-12 11.11806478 1.02262889 LYPPGDEEEAELADS(ph)SGLYHEGSPSPGSPWK ddPTM_A459_MK2206_30min_R2 1 LYPPGDEEEAELADSSGLYHEGSPSPGSPWK 31 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 LYPPGDEEEAELADS(0.23)S(0.23)GLY(0.204)HEGS(0.23)PS(0.04)PGS(0.065)PWK 53.209 0.0040438 5476600 13486 20276 14357 20097 22152 19455 22117 19385 19014 22789 TRUE FALSE 14518.49853 19269.12332 14835.65521 18455.01081 21282.20118 20195.37366 19213.01133 21918.68606 20667.80335 22045.3968 0.658572792 0.874065616 0.672959319 0.837136704 0.965380726 0.916081205 0.871520323 0.994252281 0.937511061 1 14.42818982 -6.038968258 4.144317492 0.94062643 0.748581944 0.680581521 0.065097111 0.128800195 4.829691952 0.018479369 0.025577066 9.14E-07 6.038968258 -0.192044487 LYPPGDEEEAELADSSGLY(ph)HEGSPSPGSPWK ddPTM_A459_MK2206_30min_R1 1 LYPPGDEEEAELADSSGLYHEGSPSPGSPWK 31 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 LYPPGDEEEAELADS(0.163)S(0.163)GLY(0.632)HEGS(0.03)PS(0.009)PGS(0.003)PWK 78.991 0.000684 0 166.1 72.225 314.43 206.18 235.13 266.65 172.18 315.5 175.01 193.33 TRUE FALSE 151.9723228 67.52313937 293.0873677 222.0600193 225.7642742 281.7474926 160.6941864 312.7416168 193.2029158 217.28118 0.699426995 0.310763865 1.348885199 1.021993802 1.039042011 1.296695336 0.739567902 1.439340567 0.889183848 1 7.763419409 -5.258383321 24.99978992 1.102170203 0.505095409 0.535581232 0.220367336 177.1625567 1449242.903 0.051954058 0.125909983 5.52E-06 5.258383321 -0.597074794 LYPPGDEEEAELADSSGLYHEGS(ph)PSPGSPWK ddPTM_A459_MK2206_30min_R1 1 LYPPGDEEEAELADSSGLYHEGSPSPGSPWK 31 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 LYPPGDEEEAELADS(0.034)S(0.009)GLY(0.143)HEGS(0.482)PS(0.156)PGS(0.175)PWK 93.229 1.49E-07 12058000 4111.5 2824.8 3986.1 3093.7 4638.6 4944.1 4345.1 4869.7 3486.3 2802.2 TRUE FALSE 3761.795335 2640.905007 3715.534638 3331.97731 4453.83474 5224.030669 4055.246307 4827.124726 3848.713361 3149.357692 1.194464301 0.838553529 1.179775371 1.057986306 1.414204157 1.658760668 1.28764234 1.532733084 1.222062953 1 11.62084191 -6.259112715 24.30618532 1.391267293 1.059333363 0.336317071 0.191327445 136.3732818 1424657.93 0.054739699 0.067277576 5.51E-07 6.259112715 -0.33193393 LYPPGDEEEAELADSSGLYHEGSPS(ph)PGSPWK ddPTM_A459_MK2206_30min_R2 1 LYPPGDEEEAELADSSGLYHEGSPSPGSPWK 31 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 LYPPGDEEEAELADS(0.006)S(0.006)GLY(0.017)HEGS(0.019)PS(0.846)PGS(0.106)PWK 77.241 1.67E-05 5848700 20990 27023 20219 35123 36239 33353 40699 24143 34197 36196 TRUE FALSE 22597.01054 25681.07712 20893.09137 32253.33855 34816.07477 34622.27179 35355.17241 27298.573 37171.39325 35014.92748 0.645353629 0.733432252 0.596690979 0.921131096 0.994320916 0.988786049 1.009717139 0.779626718 1.061587041 1 15.09568248 -5.834420073 5.809001532 0.96269124 0.66666721 0.769845423 0.076937979 0.092270215 5.406102923 0.021203534 0.032112249 1.46E-06 5.834420073 -0.29602403 LYPPGDEEEAELADSSGLYHEGSPSPGS(ph)PWK ddPTM_A459_MK2206_30min_R1 1 LYPPGDEEEAELADSSGLYHEGSPSPGSPWK 31 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 LYPPGDEEEAELADS(0.002)S(0.001)GLY(0.06)HEGS(0.328)PS(0.172)PGS(0.437)PWK 98.683 2.32E-08 12212000 696.32 567.11 701.19 507.31 758.95 578.93 680.65 673.28 534.11 490.99 TRUE FALSE 637.0943275 530.1910359 653.5951764 546.3831041 728.7194144 611.7085163 635.2450804 667.3935839 589.6326458 551.817548 1.154537999 0.960808582 1.184440725 0.990151738 1.320580357 1.108534005 1.151186806 1.209446105 1.068528263 1 9.108047525 LYQTDPSGTYHAWK ddPTM_A459_MK2206_30min_R2 2 LYQTDPSGTYHAWK 14 0 Q8TAA3-2;O14818;Q8TAA3-5;Q8TAA3;H0Y586;A0A087WYS6;O14818-2 Q8TAA3-2 PSMA8;PSMA7 Proteasome subunit alpha type-7-like;Proteasome subunit alpha type-7 0 ; 112.5 0.005049 6237400 59934 84730 71488 84794 86731 90718 90410 71107 65594 81521 FALSE TRUE 64522.59312 80522.43141 73871.37424 77866.05896 83325.50515 94170.33706 78539.0584 80400.92905 71299.24755 78860.97645 0.818181514 1.021068151 0.936729135 0.987383906 1.056612648 1.194131005 0.995917904 1.019527435 0.904113172 1 16.26702395 -4.760686271 24.94662536 1.016773516 0.818181278 0.387191443 0.073313285 20.00793096 662315.1148 0.01942295 0.113009746 1.74E-05 4.760686271 -0.198592237 LYREEGLAYIWMPT(ph)PDMS(ph)T(ph)EDEK ddPTM_A459_MK2206_30min_R2 1 LYREEGLAYIWMPTPDMSTEDEK 23 1 H0Y7S8;A0A1W2PPT8 H0Y7S8 EPM2A 3 LY(0.024)REEGLAY(0.071)IWMPT(0.924)PDMS(0.99)T(0.99)EDEK 49.528 0.044204 5073800 7782.9 8343.2 8119.7 8073 7938.9 6920.3 9089.6 9076.7 5083.8 11370 TRUE FALSE 8378.764808 7928.88882 8390.406745 7413.410076 7627.178896 7183.656866 7896.124601 10263.05585 5525.979735 10998.99783 0.761775294 0.720873751 0.762833749 0.674007777 0.693443077 0.653119218 0.717894914 0.933090088 0.502407567 1 13.42508446 -10.89765996 3.688427879 1.001377496 0.718047026 0.416362992 0.101700713 39572918.49 57437874.03 564784.1901 0.023936877 1.27E-11 10.89765996 -0.28333047 LYS(ph)GDHQR ddPTM_A459_MK2206_30min_R2 4 LYSGDHQR 8 0 E9PKC0;Q6IQ23;Q6IQ23-2;H0YDE2;A0A1B0GTN9;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 LYS(1)GDHQR;LYS(1)GDHQR;LYS(1)GDHQR;LYS(1)GDHQR 112.85 0.0072758 20538800 132104 113569 141998 121848 81803 89678 122210 81817 106035 121957 TRUE FALSE 142217.9838 107929.3286 146732.1424 111892.6286 78591.00319 93090.75913 106163.6802 92510.76282 115257.7326 117977.5531 1.205466465 0.914829353 1.243729325 0.948423032 0.666152172 0.789054839 0.899863384 0.784138681 0.976946289 1 16.84815287 -5.994093867 23.23023131 0.838004463 1.099921593 0.485314654 0.122590469 52.86096269 207906.5101 0.033011831 0.048761704 1.01E-06 5.994093867 0.26191713 LYS(ph)NAYLNDLAGCIK ddPTM_A459_MK2206_30min_R1 2 LYSNAYLNDLAGCIK 15 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 1 LY(0.026)S(0.744)NAY(0.23)LNDLAGCIK;LY(0.254)S(0.746)NAYLNDLAGCIK 124.42 0.0013274 31591000 4316.6 4287.1 4871.5 3331 3719.5 2841.15 5383.6 4604.2 4004.4 4675 TRUE FALSE 3949.450503 4008.009011 4540.836153 3587.554197 3571.344439 3002.013458 5024.469867 4563.945965 4420.67171 5254.174294 0.751678624 0.762823764 0.864234016 0.682800759 0.679715639 0.571357798 0.956281536 0.868632388 0.841363735 1 12.35924834 -7.28352078 24.96615787 0.905622126 0.723972987 0.586071519 0.081158097 676.6948601 765096.3281 0.036148592 0.024393138 5.21E-08 7.28352078 -0.181649139 LYS(ph)SGSSTPTGLAGGSR ddPTM_A459_MK2206_30min_R1 2 LYSSGSSTPTGLAGGSR 17 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 LYS(0.971)S(0.029)GSSTPTGLAGGSR;LYS(0.815)S(0.094)GS(0.059)S(0.016)T(0.016)PTGLAGGSR 210.9 3.13E-09 20479300 2184.95 1883.37 2332.4 1689.82 1759.2 1710.5 1636.16 1494.25 1687.85 1633.54 TRUE FALSE 1999.108529 1760.762271 2174.083186 1819.970229 1689.127339 1807.347032 1527.014752 1481.18593 1863.308048 1835.915268 1.088889321 0.959065106 1.18419582 0.991314938 0.920046458 0.98443924 0.831745767 0.806783383 1.014920503 1 10.84228376 -6.036920614 4.567791844 0.916638323 1.069153527 0.40118786 0.081638616 0.201159119 9.784858539 0.024221404 0.033240848 9.19E-07 6.036920614 0.152515204 LYS(ph)VSYLLK ddPTM_A459_MK2206_30min_R1 1 LYSVSYLLK 9 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 LYS(0.926)VS(0.074)YLLK 110.53 0.010796 17145000 757.59 732.86 770.32 792.58 731.06 729.25 744.89 603.16 590.76 610.25 TRUE FALSE 693.1529922 685.1506808 718.0328246 853.6246489 701.9403322 770.5395048 695.1997472 597.8866357 652.1716161 685.8523772 1.010644587 0.998976899 1.04692037 1.244618634 1.023456877 1.123477195 1.013628837 0.871742456 0.950892113 1 9.421754274 -7.540360527 6.369709078 0.934218954 1.075013819 0.403671056 0.072815536 0.158062678 24.99743788 0.035152285 0.020694864 2.88E-08 7.540360527 0.140794864 LYSGS(ph)PTR ddPTM_A459_MK2206_30min_R1 2 LYSGSPTR 8 0 Q6PJI9-3;Q6PJI9;H3BMH3;Q6PJI9-4 Q6PJI9-3 WDR59 WD repeat-containing protein 59 1 LYS(0.014)GS(0.936)PT(0.05)R;LYS(0.012)GS(0.988)PTR 128.6 0.0042872 34581400 5833.7 5892.1 5807 5209.2 6048.2 5664.6 7144.5 7142.4 6279.4 5906 TRUE FALSE 5337.513181 5508.523219 5412.837019 5610.413487 5807.287387 5985.324757 6667.903441 7079.95475 6932.166101 6637.679868 0.804123321 0.829886847 0.815471238 0.845237131 0.874897178 0.901719407 1.004553334 1.066630945 1.044365838 1 12.69646334 -7.077246577 1.347641125 1.046413318 0.824559654 0.949058324 0.021522558 0.085703057 0.312814318 0.01211972 0.008272096 8.37E-08 7.077246577 -0.221853664 LYSGSPT(ph)R ddPTM_A459_MK2206_30min_R1 1 LYSGSPTR 8 0 Q6PJI9-3;Q6PJI9;H3BMH3;Q6PJI9-4 Q6PJI9-3 WDR59 WD repeat-containing protein 59 1 LYSGS(0.445)PT(0.554)R 135.8 0.0011035 3920400 3962 3786.6 3542.9 3025.4 4435.7 4079 4864.6 4741.2 4283.2 4280.1 TRUE FALSE 3625.011095 3540.091652 3302.417819 3258.416832 4259.016676 4309.949455 4540.09141 4699.748188 4728.453968 4810.351101 0.753585553 0.735932072 0.686523239 0.677376092 0.885385825 0.895973987 0.943817055 0.97700731 0.982974812 1 12.23192648 -6.532969582 1.838164692 0.966170768 0.711897396 0.91563668 0.03523511 0.09736857 0.665466207 0.014172709 0.015308061 2.93E-07 6.532969582 -0.254273372 LYSILQGDS(ph)PTK ddPTM_A459_MK2206_30min_R1 1 LYSILQGDSPTK 12 0 O15042-2;O15042;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 LYSILQGDS(1)PTK 235.38 7.68E-11 28873000 2361.7 2548.1 2717.1 1575.3 1856.9 1784.8 2112 1872 2836.2 3117.8 TRUE FALSE 2160.825013 2382.218227 2532.670822 1696.629879 1782.935741 1885.853834 1971.112334 1855.633301 3131.033139 3504.056602 0.616663844 0.679845818 0.722782509 0.484190203 0.508820474 0.538191601 0.562522972 0.529567159 0.893545252 1 11.77481036 -8.375407638 3.948877697 0.992799945 0.580889536 0.807001344 0.072329245 0.102551341 2.60888681 0.077628225 0.020550006 4.21E-09 8.375407638 -0.411910409 LYSILQGDS(ph)PTKWR ddPTM_A459_MK2206_30min_R1 1 LYSILQGDSPTKWR 14 1 O15042-2;O15042;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 LYSILQGDS(0.524)PT(0.476)KWR 117.2 0.0013969 23560000 2110 2753 2894.4 2642.1 2454.6 2079.5 2391.4 2944.1 2023.6 1827.7 TRUE FALSE 1930.53342 2573.7792 2697.936192 2845.595 2356.828084 2197.239493 2231.874069 2918.360044 2233.960462 2054.129274 0.939830537 1.252978199 1.313420838 1.38530473 1.147361129 1.069669529 1.086530481 1.42072852 1.087546188 1 11.00431126 -6.417008466 17.50038642 1.150515457 1.23585966 0.067260031 0.150519076 9.79890762 1601.950892 0.048012611 0.054440826 3.83E-07 6.417008466 0.085344203 LYSILQGDSPT(ph)K ddPTM_A459_MK2206_30min_R2 2 LYSILQGDSPTK 12 0 O15042-2;O15042;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 LYSILQGDS(0.142)PT(0.858)K;LYSILQGDS(0.312)PT(0.688)K 153.32 0.0011041 16333400 116386 85011 91871 89965 82670 66082 118496 83498 65108 110923 TRUE FALSE 125296.6016 80789.47736 94933.93329 82614.57172 79423.96042 68596.79682 102937.3329 94411.47529 70770.97615 107303.5916 1.167683204 0.752905622 0.884722793 0.76991432 0.740179888 0.639277733 0.959309296 0.879853823 0.659539677 1 16.71133884 -4.756516712 24.99649331 0.804073969 1.167683762 0.468548666 0.114301077 133.3237274 676917.7573 0.027725701 0.22287933 1.75E-05 4.756516712 0.363609793 LYSNAYLNDLAGCIK ddPTM_A459_MK2206_30min_R1 1 LYSNAYLNDLAGCIK 15 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 0 177.38 0.00027007 20942000 3940 4142.4 4081 4194.6 4075.1 3988.8 3931.5 4002.2 2894.5 3375.4 FALSE TRUE 3604.88231 3872.729007 3803.99309 4517.668819 3912.780138 4214.642409 3669.236808 3967.209187 3195.393633 3793.570035 0.950261173 1.020866617 1.002747558 1.190875291 1.031424253 1.110996336 0.967225272 1.045771964 0.842318345 1 11.88934046 -7.29265399 22.72599454 0.967643143 1.053064876 0.233691213 0.077337445 361.9108079 263488.6126 0.032455415 0.021885738 5.10E-08 7.29265399 0.085421733 LYSNAYLNDLAGCIKT(ph)LR ddPTM_A459_MK2206_30min_R1 1 LYSNAYLNDLAGCIKTLR 18 1 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 1 LYSNAYLNDLAGCIKT(1)LR 77.231 0.019297 6889400 864.19 863.23 1041 816.65 1352.7 916.11 1212.8 1190.4 987.96 850.98 TRUE FALSE 790.6861025 807.0335701 970.3398204 879.5485245 1298.819095 967.9793565 1131.896325 1179.992458 1090.661977 956.405827 0.826726563 0.843819169 1.014569122 0.919639446 1.358020892 1.012101065 1.183489574 1.233777989 1.140375714 1 9.90147911 -5.752917651 1.436256703 1.157576118 0.837249007 0.527176186 0.1127951 0.314799602 1.302731116 0.035773455 0.085020835 1.77E-06 5.752917651 -0.320327111 LYSSGSS(ph)TPTGLAGGSR ddPTM_A459_MK2206_30min_R1 1 LYSSGSSTPTGLAGGSR 17 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 LYSS(0.001)GS(0.083)S(0.447)T(0.447)PT(0.022)GLAGGSR 173.19 4.37E-07 7288200 2107.8 1951.9 1621.7 1642.5 2046.7 1979.4 2772.5 1999.2 2121.9 2594.5 TRUE FALSE 1928.520542 1824.830955 1511.623522 1769.005635 1965.175605 2091.471917 2587.551584 1981.721205 2342.479098 2915.926247 0.661374938 0.625815196 0.518402523 0.606670226 0.67394558 0.717258168 0.887385813 0.679619797 0.803339625 1 11.50973851 -6.802743154 1.656285251 0.818436502 0.599442604 0.610357901 0.084406656 0.271296578 1.540451375 0.036440029 0.032121368 1.57E-07 6.802743154 -0.218993898 LYSSGSS(ph)TPTGLAGGSR ddPTM_A459_MK2206_30min_R2 4 LYSSGSSTPTGLAGGSR 17 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 LYSSGS(0.074)S(0.463)T(0.463)PT(0.001)GLAGGSR;LYSS(0.001)GS(0.062)S(0.448)T(0.448)PT(0.042)GLAGGSR;LY(0.001)S(0.029)S(0.103)GS(0.103)S(0.371)T(0.371)PT(0.023)GLAGGSR;LYSSGS(0.094)S(0.448)T(0.448)PT(0.01)GLAGGSR 260.07 3.37E-40 35585700 131811 114688 115533 133183 125660 139920 158143 124917 115177 153299 TRUE FALSE 141902.5515 108992.7607 119384.8126 122301.5229 120725.957 145244.7536 137378.6341 141244.0808 125194.8873 148296.8662 0.95688166 0.734963344 0.805039349 0.8247074 0.814082995 0.979418901 0.926375841 0.95244144 0.844218024 1 17.17812859 -6.750216488 24.9995714 0.936636243 0.820651883 0.437442696 0.063989034 199.2873184 443922.2396 0.020350173 0.020170773 1.78E-07 6.750216488 -0.11598436 LYTSAPNT(ph)SQGK ddPTM_A459_MK2206_30min_R2 1 LYTSAPNTSQGK 12 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 LYTS(0.004)APNT(0.913)S(0.083)QGK 164.53 0.0011951 2786800 20935 16769 17121 15965 14418 12312 20270 13739 11131 18834 TRUE FALSE 22537.7997 15936.27584 17691.80559 14660.60843 13851.87688 12780.54179 17608.52465 15534.73447 12099.15426 18219.44812 1.237018791 0.874684883 0.971039599 0.804668085 0.760279718 0.701477987 0.966468607 0.852645721 0.664079075 1 14.15319164 -1.875532488 1.015881306 0.821066961 199.9741773 0.544299003 0.108177432 599.5551411 1.70863413 0.033517681 276777.7563 0.013318874 1.875532488 199.1531103 LYTSAPNTS(ph)QGK ddPTM_A459_MK2206_30min_R2 1 LYTSAPNTSQGK 12 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 LYTS(0.002)APNT(0.031)S(0.967)QGK 166.62 0.00046273 9728700 64892 49422 52102 45000 51956 38661 62908 48364 41946 60835 TRUE FALSE 69860.18141 46967.77535 53839.05468 41323.35605 49915.94638 40132.27145 54648.10403 54685.34086 45594.38726 58849.95893 1.187089722 0.798093596 0.914852884 0.702181561 0.848189995 0.681942217 0.928600547 0.929233288 0.774756484 1 15.84475379 -4.757715952 24.97257573 0.835579744 1.187090231 0.523048271 0.098694171 82.10363983 550577.3269 0.023613333 0.171860675 1.75E-05 4.757715952 0.351510486 MAAAGGTVSGPS(ph)SACKPGR ddPTM_A459_MK2206_30min_R2 1 MAAAGGTVSGPSSACKPGR 19 1 A0A087X2H1;Q9ULT8;G3V4V5;A0A087WVU6 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 MAAAGGTVS(0.036)GPS(0.688)S(0.276)ACKPGR 54.828 0.032734 2515900 8917.5 7913.3 8545.5 7146.7 6260.6 6487.2 7622.2 7891.7 6823.1 10061 TRUE FALSE 9600.230656 7520.337029 8830.402705 6562.791749 6014.777387 6734.074942 6621.395984 8923.172286 7416.560905 9732.710394 0.986388197 0.772686818 0.907291222 0.674302582 0.617996133 0.691901297 0.68032395 0.916822953 0.762024205 1 13.24862591 -10.49407247 15.48930066 0.999999999 0.773251066 0.247044348 0.115447641 0 0 0.117139605 0.028410527 3.21E-11 10.49407247 -0.226748933 MAADSDDGAVSAPAAS(ph)DGGVSK ddPTM_A459_MK2206_30min_R1 1 MAADSDDGAVSAPAASDGGVSK 22 0 Q96GM8 Q96GM8 TOE1 Target of EGR1 protein 1 1 MAADSDDGAVS(0.003)APAAS(0.97)DGGVS(0.027)K 70.335 0.020371 0 999.79 794.08 959.43 659.58 1114.4 725.96 869.07 796.25 873.95 885.38 TRUE FALSE 914.7526104 742.3852477 894.3065647 710.3809659 1070.011088 767.0632278 811.095926 789.2884702 964.80023 995.0675587 0.919286939 0.74606517 0.898739545 0.713902247 1.075315016 0.770865477 0.81511644 0.793200887 0.969582639 1 9.958650668 -8.370363203 5.192197683 0.996447238 0.840827199 0.252991058 0.098806175 0.300137047 11.25527467 0.089493881 0.023351445 4.26E-09 8.370363203 -0.155620039 MAAGGAAPET(ph)PAIS(ph)PSKR ddPTM_A459_MK2206_30min_R1 1 MAAGGAAPETPAISPSKR 18 1 H0YNW5;H0YMM5 H0YNW5 DUT 2 MAAGGAAPET(0.94)PAIS(0.954)PS(0.106)KR 65.924 0.013407 150700000 1193.9 1272.2 1191.6 978.86 1420.5 1274.6 1198.6 1271 1140.2 966.46 TRUE FALSE 1092.352536 1189.379549 1110.717512 1054.251967 1363.918477 1346.766751 1118.643581 1259.887781 1258.72787 1086.192361 1.005671348 1.094998999 1.022579012 0.970594164 1.255687782 1.239897092 1.029876126 1.159912209 1.15884434 1 10.08506391 -6.246087582 24.99831184 1.14811691 1.028507757 0.335446863 0.080312227 964.3966276 1570388.372 0.023938635 0.030796363 5.67E-07 6.246087582 -0.119609152 MADGGS(ph)PFLGR ddPTM_A459_MK2206_30min_R1 2 MADGGSPFLGR 11 0 O60504-2;O60504;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 MADGGS(1)PFLGR;MADGGS(1)PFLGR 145.14 0.00070712 11210900 6670.2 6654.3 6042.5 4554.8 6964.3 5932 8051 5912.8 5575.1 6677.2 TRUE FALSE 6102.864463 6221.103861 5632.351935 4905.611485 6686.897184 6267.864714 7513.93248 5861.105013 6154.651596 7504.421946 0.813235784 0.828991747 0.750537746 0.653696117 0.891060928 0.835222854 1.001267324 0.781020184 0.820136666 1 12.87352523 -6.309606368 24.99165741 0.880181754 0.765636575 0.373669708 0.079771192 474.9806495 246444.6155 0.025122711 0.028486535 4.90E-07 6.309606368 -0.114545179 MADGGS(ph)PFLGR ddPTM_A459_MK2206_30min_R2 1 MADGGSPFLGR 11 0 O60504-2;O60504;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 MADGGS(1)PFLGR 84.352 0.036404 4977800 32521 29114 34993 41704 29872 35789 39210 31217 30421 34466 TRUE FALSE 35010.83276 27668.2411 36159.64915 38296.6498 28699.07519 37150.97547 34061.6799 35297.16908 33066.96359 33341.37724 1.050071583 0.829846976 1.084527759 1.148622311 0.860764538 1.114260374 1.021603866 1.0586596 0.991769577 1 15.02502608 -5.288142136 24.99648669 1.037304812 0.939959193 0.152504861 0.089513868 1121.573577 1049904.455 0.022365234 0.046575369 5.15E-06 5.288142136 -0.09734562 MAEAPASPAPLS(ph)PLEVELDPEFEPQSRPR ddPTM_A459_MK2206_30min_R1 1 MAEAPASPAPLSPLEVELDPEFEPQSRPR 29 1 O43524;A0A2Z4LIS9 O43524 FOXO3 Forkhead box protein O3 1 MAEAPAS(0.191)PAPLS(0.808)PLEVELDPEFEPQS(0.001)RPR 57.738 0.0029373 2092800 469.91 630.15 497.19 414.23 645.3 362.14 621.12 324.77 344.67 375.1 TRUE FALSE 429.9416869 589.1271205 463.4421281 446.1340664 619.5963346 382.6440538 579.6862181 321.9305701 380.4996799 421.5702199 1.019857824 1.397459054 1.099323686 1.058267509 1.469734591 0.907663862 1.37506444 0.763646375 0.902577227 1 8.719629147 -7.769879172 24.99994057 0.874833822 1.189021606 0.373013169 0.178487512 184.763333 547287.0736 0.088816642 0.043764608 1.70E-08 7.769879172 0.314187784 MAEESSSSSSSSS(ph)PTAATSQQQQLK ddPTM_A459_MK2206_30min_R2 2 MAEESSSSSSSSSPTAATSQQQQLK 25 0 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 MAEESSSSS(0.001)S(0.004)S(0.025)S(0.162)S(0.757)PT(0.051)AATSQQQQLK;MAEESSSSSS(0.002)S(0.01)S(0.06)S(0.926)PT(0.002)AATSQQQQLK 161.02 2.55E-13 17466600 98546 119703 112690 128539 127321 123924 142286 107085 116858 144625 TRUE FALSE 106090.7575 113758.7231 116447.0284 118036.9525 122321.7378 128640.0147 123603.6773 121081.3772 127022.0976 139905.8981 0.758300822 0.813108844 0.83232394 0.84368818 0.874314375 0.919475279 0.883477244 0.865448697 0.907910955 1 17.09409726 -1.522878745 0.098381796 1.056549374 0.254020567 0.866757151 0.022746247 51.64172981 0.362319589 0.344351735 5.591009641 0.03 1.522878745 -0.802528807 MAGIEIT(ph)EEMT(ph)MEQLEAMTGGEQLK ddPTM_A459_MK2206_30min_R2 1 MAGIEITEEMTMEQLEAMTGGEQLK 25 0 A0A0C4DG98;Q8NI27 A0A0C4DG98 THOC2 THO complex subunit 2 2 MAGIEIT(0.987)EEMT(0.975)MEQLEAMT(0.038)GGEQLK 41.115 0.046896 0 627.48 683.43 0 1022.9 701.45 465.84 683.23 438.08 993.86 836.5 TRUE FALSE 675.5203513 649.49186 0 939.3257979 673.9075485 483.5678676 593.5210803 495.3385602 1080.304146 809.2050735 0.834795002 0.802629496 0 1.160800678 0.832801932 0.597583831 0.733461887 0.612129825 1.335018998 1 9.660361555 -8.255115786 24.87173199 1.167509508 0.694996184 0.300800638 0.287065695 524.2836556 2062115.611 0.202507148 0.072274746 5.56E-09 8.255115786 -0.472513324 MAGNEALS(ph)PTSPFR ddPTM_A459_MK2206_30min_R1 4 MAGNEALSPTSPFR 14 0 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 MAGNEALS(0.78)PT(0.173)S(0.047)PFR;MAGNEALS(0.682)PT(0.217)S(0.101)PFR;MAGNEALS(0.438)PT(0.438)S(0.123)PFR;MAGNEALS(0.928)PT(0.069)S(0.003)PFR 160.03 0.00029381 107865000 10939.4 11429.7 11346.5 9663.7 10503.5 9151.7 8994.9 8243.8 7739.7 6723.3 TRUE FALSE 10008.94658 10685.62445 10576.33119 10407.99985 10085.12335 9669.861345 8394.866633 8171.725326 8544.269512 7556.233162 1.324594725 1.414146999 1.399683012 1.377405861 1.33467604 1.27971982 1.110985653 1.081454893 1.13075779 1 12.8834515 -7.129587111 1.461351229 1.068799639 1.382552327 0.930835417 0.037510512 0.096190031 0.407994883 0.020113079 0.013315364 7.42E-08 7.129587111 0.313752687 MAGNEALS(ph)PTSPFR ddPTM_A459_MK2206_30min_R2 1 MAGNEALSPTSPFR 14 0 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 MAGNEALS(0.333)PT(0.333)S(0.333)PFR 109.99 0.004392 31256000 40680 48950 48502 39900 46216 43669 41921 31437 43772 38964 TRUE FALSE 43794.49208 46519.21418 50119.03247 36640.04237 44401.32762 45330.8544 36416.72234 35545.92384 47579.20944 37692.60787 1.161885435 1.234173404 1.329678027 0.972075015 1.177985025 1.202645743 0.966150245 0.943047612 1.262295504 1 15.20199399 -6.194730468 0.781365101 1.054693354 1.233487123 0.197455575 0.120260691 1.174404452 1.520549643 0.067140794 0.126667733 6.39E-07 6.194730468 0.17879377 MAGNEALSPT(ph)SPFR ddPTM_A459_MK2206_30min_R1 1 MAGNEALSPTSPFR 14 0 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 MAGNEALS(0.275)PT(0.641)S(0.084)PFR 149.6 0.0010219 76743000 2639.9 2657.4 2428.4 2162.9 2625.6 2132.1 2193.4 1670.1 1744.5 1681.3 TRUE FALSE 2415.362642 2484.402777 2263.566974 2329.486933 2521.016792 2252.817659 2047.082288 1655.498492 1925.847018 1889.592137 1.278245498 1.314782554 1.197912994 1.232798807 1.334159231 1.192224298 1.083346108 0.876114194 1.019186617 1 10.88385915 -7.338364108 2.358364991 0.962074418 1.266358373 0.85783972 0.054303733 0.102301026 1.112268032 0.026428045 0.016377364 4.59E-08 7.338364108 0.304283955 MAGNEALSPT(ph)SPFR ddPTM_A459_MK2206_30min_R2 2 MAGNEALSPTSPFR 14 0 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 MAGNEALS(0.097)PT(0.819)S(0.085)PFR;MAGNEALS(0.208)PT(0.782)S(0.009)PFR 129.38 0.0024736 15884700 37738 44860 40561 39978 40671 34979 37145 28194 30995 29714 TRUE FALSE 40627.2503 42632.31763 41913.2835 36711.66952 39074.05218 36310.15036 32267.81688 31879.0526 33690.88907 28744.43461 1.413395353 1.483150328 1.458135603 1.277174869 1.35936061 1.263206281 1.122576155 1.109051301 1.172083902 1 14.81099503 -6.843472393 0.462265366 1.023946158 1.503322945 0.880101368 0.053578528 0.369695657 0.168085893 0.052301513 0.070624706 1.43E-07 6.843472393 0.479376787 MAGNEALSPTS(ph)PFR ddPTM_A459_MK2206_30min_R1 2 MAGNEALSPTSPFR 14 0 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 MAGNEALS(0.003)PT(0.043)S(0.953)PFR;MAGNEALS(0.001)PT(0.104)S(0.894)PFR 178.47 7.16E-05 83157000 15913.9 15914.5 14802.8 11061.8 15585.6 12586.7 12564.1 11123.4 9537.8 8854.9 TRUE FALSE 14560.33924 14878.46316 13798.02718 11913.78175 14964.79255 13299.34808 11725.97181 11026.14929 10529.28844 9951.911863 1.463069553 1.495035664 1.386469994 1.197134974 1.503710318 1.336361119 1.17826323 1.107942819 1.058016649 1 13.28075799 -7.479748326 1.270381868 1.027565613 1.408437962 0.782801932 0.083142147 0.229624089 0.701705173 0.064142435 0.030742232 3.31E-08 7.479748326 0.380872349 MAGNEALSPTS(ph)PFR ddPTM_A459_MK2206_30min_R2 2 MAGNEALSPTSPFR 14 0 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 MAGNEALS(0.001)PT(0.006)S(0.993)PFR;MAGNEALS(0.028)PT(0.23)S(0.742)PFR 134.02 0.00067854 28270300 81221 94860 84539 84885 93199 93844 78275 68276 66386 70369 TRUE FALSE 87439.34221 90149.39034 87357.48807 77949.62397 89539.53897 97415.29918 67997.39847 77199.90763 72160.13428 68072.86529 1.28449628 1.324307269 1.283293831 1.145090979 1.315348466 1.431044496 0.998891382 1.13407754 1.060042558 1 16.05479222 -7.273702267 24.99524185 1.059425989 1.291762934 0.727734479 0.074445352 456.8792124 931245.8812 0.032260943 0.021934473 5.32E-08 7.273702267 0.232336946 MALLQEFASRPLGAAPQAEHQGLPVPGS(ph)PGGQK ddPTM_A459_MK2206_30min_R2 1 MALLQEFASRPLGAAPQAEHQGLPVPGSPGGQK 33 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 MALLQEFASRPLGAAPQAEHQGLPVPGS(1)PGGQK 49.968 0.0041823 4232400 13391 14454 11715 13288 14972 13547 13290 9897.5 11098 14705 TRUE FALSE 14416.22526 13736.23538 12105.57225 12202.32789 14384.12405 14062.54058 11545.00704 11191.13723 12063.28398 14225.17705 1.013430286 0.965628429 0.850996245 0.857797963 1.011173639 0.988566998 0.81158969 0.786713388 0.848023468 1 13.79615899 -7.266100374 24.99741472 0.84380775 0.943108044 0.225555416 0.075250107 557.7754969 2991391.524 0.031748074 0.022189781 5.42E-08 7.266100374 0.099300294 MALPPQEDAT(ph)ASPPR ddPTM_A459_MK2206_30min_R1 4 MALPPQEDATASPPR 15 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.704)AS(0.296)PPR;MALPPQEDAT(0.96)AS(0.04)PPR;MALPPQEDAT(0.805)AS(0.195)PPR;MALPPQEDAT(0.5)AS(0.5)PPR 188.63 0.00025669 73917000 12582.8 13457.3 13005 10895.6 13397.3 13176.5 14358.6 11623.8 11858.4 11215.5 TRUE FALSE 11512.56679 12581.22732 12122.25683 11734.781 12863.65717 13922.54204 13400.76399 11522.17434 13091.12312 12604.96081 0.913336182 0.998117131 0.961705238 0.93096529 1.020523377 1.104528784 1.063134126 0.914098387 1.038569125 1 13.62170401 -6.299353696 10.22763005 1.025258601 0.955169497 0.332286484 0.050135061 0.895518411 238.5453953 0.016510103 0.01878816 5.02E-07 6.299353696 -0.070089104 MALPPQEDAT(ph)ASPPR ddPTM_A459_MK2206_30min_R2 7 MALPPQEDATASPPR 15 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.876)AS(0.124)PPR;MALPPQEDAT(0.547)AS(0.453)PPR;MALPPQEDAT(0.755)AS(0.245)PPR;MALPPQEDAT(0.948)AS(0.052)PPR;MALPPQEDAT(0.784)AS(0.216)PPR;MALPPQEDAT(0.975)AS(0.025)PPR;MALPPQEDAT(0.93)AS(0.07)PPR 153.2 0.0021612 262735000 765777 918951 861103 962693 937522 940589 919500 756945 757001 863462 TRUE FALSE 824405.4759 873317.2296 889811.7442 884037.9024 900710.1756 976383.7735 798768.5455 855880.3105 822843.5786 835287.3057 0.986972351 1.045529154 1.065276269 1.058363866 1.078323793 1.168919684 0.956280001 1.024653798 0.985102459 1 19.67191299 -7.312455055 24.99999909 0.993563551 1.066257095 0.408004497 0.044647408 400.9633418 196488.7371 0.019274223 0.012994686 4.87E-08 7.312455055 0.072693544 MALPPQEDATAS(ph)PPR ddPTM_A459_MK2206_30min_R1 10 MALPPQEDATASPPR 15 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.139)AS(0.861)PPR;MALPPQEDAT(0.086)AS(0.914)PPR;MALPPQEDAT(0.377)AS(0.623)PPR;MALPPQEDAT(0.43)AS(0.57)PPR;MALPPQEDATAS(1)PPR;MALPPQEDATAS(1)PPR;MALPPQEDATAS(1)PPR;MALPPQEDAT(0.001)AS(0.999)PPR;MALPPQEDAT(0.002)AS(0.998)PPR;MALPPQEDAT(0.23)AS(0.77)PPR 287.03 4.97E-67 680819000 91972.4 92289.9 89542 73270.8 90802.1 84662.2 96245.6 77884.6 81471.9 78408 TRUE FALSE 84149.66441 86281.81074 83464.13852 78914.12971 87185.26008 89455.7006 89825.23163 77203.66315 89941.19556 88121.77499 0.954924755 0.979120209 0.947145453 0.895512258 0.989372492 1.015137298 1.019330712 0.876101998 1.020646663 1 16.42721093 MALPPQEDATAS(ph)PPR ddPTM_A459_MK2206_30min_R2 12 MALPPQEDATASPPR 15 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.408)AS(0.592)PPR;MALPPQEDAT(0.383)AS(0.617)PPR;MALPPQEDAT(0.363)AS(0.637)PPR;MALPPQEDAT(0.204)AS(0.796)PPR;MALPPQEDATAS(1)PPR;MALPPQEDAT(0.27)AS(0.73)PPR;MALPPQEDAT(0.008)AS(0.992)PPR;MALPPQEDATAS(1)PPR;MALPPQEDAT(0.002)AS(0.998)PPR;MALPPQEDAT(0.004)AS(0.996)PPR;MALPPQEDATAS(1)PPR;MALPPQEDAT(0.051)AS(0.949)PPR 239.7 4.60E-20 739293400 2047213 2469810 2267208 2610717 2368590 2494780 2498991 2041189 2043643 2283401 TRUE FALSE 2203949.201 2347162.827 2342795.583 2397413.07 2275587.255 2589720.601 2170870.48 2307979.411 2221395.374 2208893.812 0.997761499 1.062596497 1.060619379 1.08534555 1.030193141 1.17240611 0.982786256 1.044857565 1.005659648 1 21.07489264 MALPPQEDATAS(ph)PPRQK ddPTM_A459_MK2206_30min_R1 3 MALPPQEDATASPPRQK 17 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.011)AS(0.989)PPRQK;MALPPQEDATAS(1)PPRQK;MALPPQEDAT(0.001)AS(0.999)PPRQK 204.81 7.03E-08 30354300 11155.1 10962.8 11659.8 13744.7 17092.1 10299.5 8842.4 15812.2 4814.8 1781.83 TRUE FALSE 10206.30017 10249.11973 10868.36526 14803.31918 16411.28546 10882.64879 8252.53963 15673.9556 5315.31569 2002.576553 5.096584275 5.117966509 5.42719091 7.392136474 8.195085198 5.434323485 4.120960879 7.826894599 2.654238453 1 10.96764168 -5.520058733 24.93674692 5.664134777 5.148600955 0 2.175332208 812.7175363 7186679.35 0.568623925 1.008457362 3.02E-06 5.520058733 -0.515533822 MALPPQEDATAS(ph)PPRQK ddPTM_A459_MK2206_30min_R2 1 MALPPQEDATASPPRQK 17 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.048)AS(0.952)PPRQK 82.034 0.0081516 12476000 12212 62045 51939 68751 104290 84116 69756 29030 111010 31709 TRUE FALSE 13146.96011 58963.93552 53670.62034 63133.82338 100195.0506 87317.09332 60596.95341 32824.32067 120665.4491 30674.33793 0.428598007 1.922256176 1.749691239 2.058196774 3.266412818 2.846584449 1.975493442 1.0700906 3.933758878 1 14.90474458 -4.79049845 1.431297528 2.321435247 1.91E-17 0.272066456 0.872607464 1.674196596 3.167104759 0.247291742 5.605570991 1.62E-05 4.79049845 -2.321435247 MALVS(ph)ADSR ddPTM_A459_MK2206_30min_R1 1 MALVSADSR 9 0 H3BPL5;Q96ES7 H3BPL5 CCDC101 SAGA-associated factor 29 homolog 1 MALVS(1)ADSR 82.305 0.041676 16764000 2152.9 2629.9 3117.8 2138 2661.7 2494 2648.4 2498.6 2275.5 2192.2 TRUE FALSE 1969.78455 2458.693032 2906.172423 2302.66913 2555.678853 2635.208125 2471.730068 2476.755004 2512.046368 2463.786286 0.799494892 0.997932753 1.179555402 0.934605872 1.037297296 1.069576586 1.003224217 1.005263735 1.019587771 1 11.2666614 -4.78011435 4.591814406 1.031915432 0.784955626 0.57202637 0.059657702 0.12594765 5.935724887 0.014526968 0.098562623 1.66E-05 4.78011435 -0.246959806 MANS(ph)SPVLSK ddPTM_A459_MK2206_30min_R2 1 MANSSPVLSK 10 0 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 MANS(0.753)S(0.247)PVLSK 150.14 0.00072139 86596000 459370 497170 478000 541420 532930 425600 570170 455060 403660 489680 TRUE FALSE 494539.7204 472481.2608 493936.2814 497184.2541 512004.4904 441796.5062 495305.9941 514537.9045 438769.6171 473701.7817 1.043989572 0.99742344 1.042715693 1.049572269 1.080858275 0.932646917 1.045607201 1.086206395 0.926257055 1 18.85361957 MANSS(ph)PVLSK ddPTM_A459_MK2206_30min_R1 2 MANSSPVLSK 10 0 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 MANS(0.015)S(0.985)PVLSK;MANS(0.359)S(0.641)PVLSK 126.5 0.0034461 19414400 10678.7 11286.5 10198.7 8718.4 10381.1 9957.1 10317 9839.5 9251.4 8907.3 TRUE FALSE 9770.420489 10551.7468 9506.440659 9389.892679 9967.598805 10520.8624 9628.771754 9753.474289 10213.11614 10010.80357 0.975987634 1.054035945 0.949618139 0.937975919 0.995684186 1.050950838 0.961838047 0.974294843 1.020209423 1 13.28927016 -6.502132728 24.93004349 1.000258188 0.980635445 0.075197301 0.036481789 2595.308066 3118729.242 0.012060713 0.013506152 3.15E-07 6.502132728 -0.019622743 MANSS(ph)PVLSK ddPTM_A459_MK2206_30min_R2 1 MANSSPVLSK 10 0 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 MANS(0.082)S(0.918)PVLSK 127.78 0.012252 15371000 177740 197020 189770 214390 200080 187460 242150 186160 165010 193480 TRUE FALSE 191347.9111 187236.2733 196096.8371 196873.6512 192223.8539 194593.9217 210355.4141 210491.7512 179362.2715 187166.7634 1.022339156 1.000371379 1.047711856 1.051862241 1.027019169 1.039682036 1.123892994 1.124621419 0.958301935 1 17.51396474 -7.018467558 24.34836095 1.064903247 1.030727895 0.014548201 0.049358972 1388.687219 1830895.759 0.01856684 0.014657089 9.58E-08 7.018467558 -0.034175352 MAPALSGANLTS(ph)PR ddPTM_A459_MK2206_30min_R1 4 MAPALSGANLTSPR 14 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MAPALS(0.001)GANLT(0.232)S(0.768)PR;MAPALSGANLT(0.08)S(0.92)PR;MAPALSGANLT(0.218)S(0.782)PR;MAPALSGANLT(0.035)S(0.965)PR 156.2 0.00032265 258768000 19699.7 18134.7 16923.7 14289.3 17811.3 15957 17727.2 15896.2 14084 13536.9 TRUE FALSE 18024.13707 16954.12773 15774.9664 15389.86436 17101.8382 16860.47155 16544.65083 15757.2212 15548.0822 15213.95337 1.184710945 1.114380156 1.036874901 1.011562477 1.124089038 1.108224216 1.087465594 1.035708525 1.021961999 1 13.89310747 -1.522878745 0.144741051 0.99754517 1.481927306 0.426527298 0.043273318 90.66338359 0.870747521 0.192389274 9.144700989 0.03 1.522878745 0.484382137 MAPALSGANLTS(ph)PR ddPTM_A459_MK2206_30min_R2 5 MAPALSGANLTSPR 14 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MAPALS(0.011)GANLT(0.397)S(0.592)PR;MAPALSGANLT(0.094)S(0.906)PR;MAPALS(0.015)GANLT(0.318)S(0.667)PR;MAPALSGANLT(0.232)S(0.768)PR;MAPALS(0.002)GANLT(0.092)S(0.907)PR 132.23 0.00082512 201823200 298072 337310 304093 305814 321034 326518 341650 254445 258783 289426 TRUE FALSE 320892.6215 320559.6759 314231.3088 280828.0179 308428.5921 338943.8713 296790.9446 287701.8351 281291.4776 279982.0533 1.146118538 1.14492937 1.12232661 1.003021496 1.101601293 1.210591419 1.060035603 1.027572417 1.004676815 1 18.09497483 -7.538809541 4.77259369 1.015574907 1.117786181 0.504714392 0.049264924 0.184568576 11.18078054 0.02537701 0.01488157 2.89E-08 7.538809541 0.102211274 MAPPVDDLS(ph)PK ddPTM_A459_MK2206_30min_R1 5 MAPPVDDLSPK 11 0 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 PHF3 PHD finger protein 3 1 MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK 161.87 0.00054829 127252000 25494.1 35091.7 33208.5 30090.2 18295.2 15055.5 19105.5 19487.8 26926.3 22877.7 TRUE FALSE 23325.69292 32807.22395 30954.39954 32407.75242 17566.46344 15907.9294 17831.00695 19317.42022 29725.38524 25711.96219 0.907192253 1.275951781 1.203890987 1.260415373 0.683201979 0.618697604 0.693490711 0.751300895 1.156091667 1 14.65015209 -6.259811481 24.98513585 0.788591885 1.173013863 0.466513585 0.178886902 122.2879585 1876885.416 0.054869517 0.067140778 5.50E-07 6.259811481 0.384421978 MAPPVDDLS(ph)PK ddPTM_A459_MK2206_30min_R2 8 MAPPVDDLSPK 11 0 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 PHF3 PHD finger protein 3 1 MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK 174.94 0.00010299 128013500 975975 907073 978202 727818 833394 583340 1040367 764136 618868 985686 TRUE FALSE 1050696.396 862029.0738 1010814.766 668352.9412 800670.7641 605539.4125 903765.5632 864011.1989 672696.02 953523.1465 1.101909692 0.904046301 1.060084142 0.70092996 0.83969725 0.635054759 0.947817121 0.90612504 0.70548473 1 19.86290843 -5.749856731 24.99986883 0.813917526 1.010216707 0.378953864 0.118492592 235.4702851 508232.0515 0.031191203 0.053448634 1.78E-06 5.749856731 0.196299181 MAPT(ph)PIPTR ddPTM_A459_MK2206_30min_R2 2 MAPTPIPTR 9 0 Q16643-3;Q16643;Q16643-2;D6R9Q9 Q16643-3 DBN1 Drebrin 1 MAPT(1)PIPTR;MAPT(1)PIPTR 110.08 0.025867 40222000 98573 109799 119345 128397 120794 122102 142521 83327 87571 115018 TRUE FALSE 106119.8247 104346.5413 123323.9027 117906.5544 116051.0206 126748.6772 123807.8215 94218.125 95187.76729 111264.9721 0.953757707 0.937820227 1.108380296 1.059691583 1.043014872 1.139160643 1.112729543 0.846790533 0.855505246 1 16.76363996 -7.765528449 24.99984476 0.888360891 1.051989705 0.470486989 0.072500328 91.40281107 558804.1253 0.040252065 0.0204481 1.72E-08 7.765528449 0.163628814 MAPTPIPT(ph)RSPSDSSTASTPVAEQIER ddPTM_A459_MK2206_30min_R1 6 MAPTPIPTRSPSDSSTASTPVAEQIER 27 1 Q16643-3;Q16643;Q16643-2;D6R9Q9 Q16643-3 DBN1 Drebrin 1 MAPT(0.001)PIPT(0.476)RS(0.476)PS(0.018)DS(0.015)S(0.006)T(0.006)AS(0.001)T(0.001)PVAEQIER;MAPT(0.007)PIPT(0.48)RS(0.48)PS(0.02)DS(0.003)S(0.003)T(0.004)AS(0.002)T(0.002)PVAEQIER;MAPT(0.002)PIPT(0.989)RS(0.009)PSDSSTASTPVAEQIER;MAPT(0.165)PIPT(0.639)RS(0.165)PS(0.015)DS(0.004)S(0.004)T(0.005)AS(0.001)T(0.001)PVAEQIER;MAPT(0.008)PIPT(0.927)RS(0.048)PS(0.012)DS(0.003)S(0.001)TASTPVAEQIER;MAPT(0.009)PIPT(0.439)RS(0.439)PS(0.102)DS(0.006)S(0.002)T(0.002)AST(0.001)PVAEQIER 137.9 4.84E-12 495019900 6330.07 6311.6 6759.04 6413.55 7751.7 7010.35 6811.41 6396.4 5534.42 4581.16 TRUE FALSE 5791.664306 5900.713693 6300.255197 6907.522732 7442.933375 7407.269959 6357.033267 6340.476949 6109.742764 5148.708687 1.124877063 1.146057012 1.223657344 1.341602944 1.44559225 1.438665578 1.234684977 1.231469352 1.186655361 1 12.32999493 -8.647436567 1.314656358 1.001842894 1.284771451 0.403158613 0.102164441 0.700941814 2.522091015 0.112816672 0.034054834 2.25E-09 8.647436567 0.282928558 MAPTPIPT(ph)RSPSDSSTASTPVAEQIER ddPTM_A459_MK2206_30min_R2 6 MAPTPIPTRSPSDSSTASTPVAEQIER 27 1 Q16643-3;Q16643;Q16643-2;D6R9Q9 Q16643-3 DBN1 Drebrin 1 MAPTPIPT(0.497)RS(0.497)PS(0.007)DSSTASTPVAEQIER;MAPT(0.001)PIPT(0.605)RS(0.393)PS(0.002)DSSTASTPVAEQIER;MAPT(0.012)PIPT(0.742)RS(0.245)PS(0.001)DSSTASTPVAEQIER;MAPT(0.005)PIPT(0.713)RS(0.174)PS(0.012)DS(0.016)S(0.022)T(0.016)AS(0.022)T(0.022)PVAEQIER;MAPT(0.004)PIPT(0.497)RS(0.497)PS(0.002)DSSTASTPVAEQIER;MAPTPIPT(0.745)RS(0.199)PS(0.036)DS(0.01)S(0.003)T(0.004)AST(0.002)PVAEQIER 108.77 2.09E-09 216516000 149768 212409 195305 215940 226743 233778 225482 168509 210299 183576 TRUE FALSE 161234.3532 201861.0779 201816.3712 198297.0112 217839.9305 242674.5856 195875.9425 190533.7049 228590.4269 177585.9302 0.907923016 1.13669522 1.136443473 1.116625687 1.226673365 1.366519214 1.102992463 1.072909913 1.287210235 1 17.43815776 -4.121605708 1.333655357 1.175506003 3.86E-19 0.356009211 0.101565834 7.297907409 3.25541634 0.029395885 17.91825005 7.56E-05 4.121605708 -1.175506003 MAPTPIPTRS(ph)PSDSSTASTPVAEQIER ddPTM_A459_MK2206_30min_R1 3 MAPTPIPTRSPSDSSTASTPVAEQIER 27 1 Q16643-3;Q16643;Q16643-2;D6R9Q9 Q16643-3 DBN1 Drebrin 1 MAPT(0.001)PIPT(0.066)RS(0.932)PS(0.001)DSSTASTPVAEQIER;MAPT(0.001)PIPT(0.047)RS(0.825)PS(0.038)DS(0.057)S(0.02)T(0.007)AS(0.001)T(0.004)PVAEQIER;MAPT(0.025)PIPT(0.192)RS(0.643)PS(0.077)DS(0.031)S(0.013)T(0.013)AS(0.003)T(0.003)PVAEQIER 94.019 2.92E-06 133090000 3973.99 3425.37 3877.32 4270.26 5040.51 4254.36 3941.66 3652.48 3367.3 2624.65 TRUE FALSE 3635.981282 3202.37779 3614.138321 4599.156165 4839.735813 4495.238187 3678.719053 3620.546752 3717.342885 2949.811457 1.232614808 1.085621179 1.225209941 1.559135637 1.640693273 1.523906952 1.247103114 1.227382429 1.260196775 1 11.52640703 -8.561938237 1.039093627 1.009349884 1.365589844 0.293115628 0.165847086 0.891199922 2.099808501 0.185045186 0.060505459 2.74E-09 8.561938237 0.35623996 MAPTPIPTRS(ph)PSDSSTASTPVAEQIER ddPTM_A459_MK2206_30min_R2 6 MAPTPIPTRSPSDSSTASTPVAEQIER 27 1 Q16643-3;Q16643;Q16643-2;D6R9Q9 Q16643-3 DBN1 Drebrin 1 MAPTPIPT(0.222)RS(0.763)PS(0.012)DS(0.001)S(0.001)TASTPVAEQIER;MAPTPIPT(0.134)RS(0.659)PS(0.177)DS(0.016)S(0.005)T(0.006)AS(0.002)T(0.002)PVAEQIER;MAPT(0.003)PIPT(0.397)RS(0.592)PS(0.007)DS(0.001)STASTPVAEQIER;MAPT(0.001)PIPT(0.057)RS(0.93)PS(0.012)DSSTASTPVAEQIER;MAPT(0.004)PIPT(0.107)RS(0.784)PS(0.02)DS(0.026)S(0.027)T(0.027)AS(0.001)T(0.004)PVAEQIER;MAPTPIPT(0.154)RS(0.78)PS(0.059)DS(0.004)S(0.001)T(0.001)AST(0.001)PVAEQIER 125.79 4.01E-12 286454500 166513.3 221406 216348.8 240611.4 254025.4 234317.6 247014.9 191932.9 237280 198974.2 TRUE FALSE 179261.6863 210411.3 223561.761 220952.6789 244051.0864 243234.7205 214581.5469 217019.189 257918.1855 192481.6881 0.931318132 1.093149702 1.161470284 1.147915322 1.267918464 1.263677199 1.114815383 1.127479664 1.339962196 1 17.55436168 -4.537459215 1.241269597 1.189672445 0.683664026 0.411753984 0.090123024 2.275497831 2.051603693 0.025976727 1.70531066 2.90E-05 4.537459215 -0.506008419 MAPTPIPTRSPS(ph)DSSTASTPVAEQIER ddPTM_A459_MK2206_30min_R1 1 MAPTPIPTRSPSDSSTASTPVAEQIER 27 1 Q16643-3;Q16643;Q16643-2;D6R9Q9 Q16643-3 DBN1 Drebrin 1 MAPT(0.001)PIPT(0.289)RS(0.289)PS(0.404)DS(0.013)S(0.002)T(0.001)ASTPVAEQIER 65.278 0.0024263 13705000 1787.6 1915.6 1951.2 1812.3 2198.5 1562.9 1830 1927.8 1501.7 1172.9 TRUE FALSE 1635.555233 1790.894092 1818.75798 1951.88366 2110.92909 1651.390047 1707.924039 1910.945448 1657.807089 1318.207707 1.240741671 1.358582629 1.379720336 1.480710248 1.601363031 1.252754053 1.295641066 1.449654283 1.257622058 1 10.364362 -8.600480947 3.892595949 1.000111227 1.384215448 0.558494862 0.103617743 0.277195216 10.80189086 0.105454294 0.027656593 2.51E-09 8.600480947 0.38410422 MAPVPLDDSNRPAS(ph)LTK ddPTM_A459_MK2206_30min_R2 1 MAPVPLDDSNRPASLTK 17 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 MAPVPLDDS(0.019)NRPAS(0.644)LT(0.336)K 65.511 0.023798 4466600 30876 32048 31465 33198 36646 30133 35900 31113 24795 38152 TRUE FALSE 33239.8903 30456.54292 32514.0274 30485.6172 35207.09391 31279.73243 31186.28688 35179.57593 26951.62428 36907.10336 0.90063666 0.825221709 0.880969364 0.826009479 0.95393815 0.847526074 0.844994162 0.953192549 0.730255745 1 15.17161089 -11.43854374 2.845586651 1.077509702 0.865296564 0.301792292 0.062602767 588490233.3 272063336.3 302981761 0.014377535 3.64E-12 11.43854374 -0.212213139 MAS(ph)NIFGTPEENQASWAK ddPTM_A459_MK2206_30min_R2 2 MASNIFGTPEENQASWAK 18 0 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 MAS(0.818)NIFGT(0.181)PEENQAS(0.001)WAK;MAS(0.985)NIFGT(0.015)PEENQASWAK 130.15 0.00059547 25317700 52602 57787 54730 53272 56659 54391 73458 54912 62310 67857 TRUE FALSE 56629.24956 54917.38161 56554.67088 48919.50719 54434.28297 56460.88762 63812.87636 62089.18694 67729.61117 65642.83165 0.862687488 0.836608968 0.86155136 0.745237613 0.829249464 0.86012267 0.972122542 0.945863933 1.031789907 1 16.00234985 -7.245618183 2.012517392 0.992527942 0.8244375 0.819014234 0.036050778 0.144093643 1.140341882 0.018677598 0.012055853 5.68E-08 7.245618183 -0.168090442 MAS(ph)PPAPSPAPPAISPIIK ddPTM_A459_MK2206_30min_R1 1 MASPPAPSPAPPAISPIIK 19 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 MAS(1)PPAPSPAPPAISPIIK 81.01 0.0059823 4927800 2739.3 2373.5 2343.3 2338.8 2502.6 2286.2 2313.4 2126.2 2162.2 2350.7 TRUE FALSE 2506.30815 2218.984719 2184.243325 2518.934781 2402.916143 2415.642668 2159.077307 2107.610858 2386.968428 2641.922463 0.948668322 0.839912885 0.826762842 0.953447657 0.909533181 0.914350327 0.817237197 0.797756515 0.903496776 1 11.36737241 -4.739668279 24.45412865 0.878330625 0.948668678 0.080750056 0.061408562 3331.458066 3741766.762 0.015394941 0.725031504 1.82E-05 4.739668279 0.070338054 MAS(ph)PPAPSPAPPAISPIIK ddPTM_A459_MK2206_30min_R2 2 MASPPAPSPAPPAISPIIK 19 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 MAS(0.999)PPAPS(0.001)PAPPAISPIIK;MAS(0.998)PPAPS(0.002)PAPPAISPIIK 112.44 0.0005722 10197500 105070 89481 90548 86655 90746 85713 102139 81176 77009 101021 TRUE FALSE 113114.24 85037.50366 93566.82513 79575.0093 87182.85608 88974.86828 88728.02661 91785.98192 83707.10362 97724.69304 1.157478591 0.87017417 0.957453252 0.814277403 0.892127193 0.910464546 0.907938658 0.939230189 0.856560415 1 16.57643553 -4.757077845 24.99884013 0.902067764 1.157478969 0.695207755 0.050038376 68.42563583 392142.5907 0.011620707 0.088905695 1.75E-05 4.757077845 0.255411204 MAS(ph)RGDS(ph)T(ph)KVDK ddPTM_A459_MK2206_30min_R1 1 MASRGDSTKVDK 12 2 V9GYH1 V9GYH1 PANK2 3 MAS(1)RGDS(1)T(1)KVDK 63.426 0.037853 6205100 1299.5 949.91 1260.5 1452.9 806.49 1054.3 904.92 932.96 842.84 811.33 TRUE FALSE 1188.970701 888.0706863 1174.940772 1564.80261 774.3657955 1113.993555 844.5544379 924.8032291 930.4562341 911.8436856 1.303919432 0.973928646 1.288533101 1.716086468 0.849230858 1.221693556 0.926205282 1.014212462 1.020411995 1 9.832642719 -6.31712013 24.99997037 1.012868726 1.29356589 0.396024588 0.189458391 350.3393921 157297.0926 0.060347297 0.068427448 4.82E-07 6.31712013 0.280697164 MAS(ph)VVIDDLPK ddPTM_A459_MK2206_30min_R1 2 MASVVIDDLPK 11 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 MAS(1)VVIDDLPK;MAS(1)VVIDDLPK 92.19 0.025358 2052710 2065.33 2000.96 1987.31 1884.82 1954.95 1940.26 1954.96 1582.6 1593.35 1287.56 TRUE FALSE 1889.662838 1870.69714 1852.416934 2029.989163 1877.080202 2050.115844 1824.548185 1568.763495 1758.984434 1447.072653 1.305852083 1.292745831 1.280113289 1.402824632 1.297156848 1.416733182 1.260854582 1.084094493 1.215546732 1 10.49892164 -7.624225823 4.223453001 1.113242639 1.330731169 0.713612189 0.065596932 0.119854268 3.857183373 0.031650671 0.017427802 2.38E-08 7.624225823 0.21748853 MASNIFGT(ph)PEENQASWAK ddPTM_A459_MK2206_30min_R1 3 MASNIFGTPEENQASWAK 18 0 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 MAS(0.019)NIFGT(0.981)PEENQASWAK;MAS(0.047)NIFGT(0.953)PEENQASWAK;MASNIFGT(0.995)PEENQAS(0.005)WAK 216.35 8.59E-14 137661000 11915.1 9659.7 10688.4 8626.8 10972.8 10266.4 12314.9 11718.9 10668.9 10177.4 TRUE FALSE 10901.65818 9030.851774 9962.901188 9291.237631 10535.73014 10847.6747 11493.39549 11616.44289 11777.97033 11438.25315 0.953087682 0.789530679 0.871015972 0.812295157 0.92109608 0.948368125 1.004820871 1.015578405 1.029700093 1 13.48157912 -6.820046016 1.560364434 1.015671458 0.853093437 0.72535479 0.042436361 0.185741488 0.937244221 0.018254284 0.015800848 1.51E-07 6.820046016 -0.162578021 MASNIFGT(ph)PEENQASWAK ddPTM_A459_MK2206_30min_R2 2 MASNIFGTPEENQASWAK 18 0 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 MAS(0.013)NIFGT(0.986)PEENQAS(0.002)WAK;MAS(0.005)NIFGT(0.989)PEENQAS(0.006)WAK 129.54 0.001463 22875000 84463 87353 79502.6 95156 98217 102656 122985 93682 103296 122164 TRUE FALSE 90929.55222 83015.17704 82153.177 87381.45041 94360.50708 106562.646 106836.9218 105926.5591 112280.4994 118177.7987 0.769430073 0.702460005 0.69516591 0.739406652 0.798462217 0.901714596 0.90403547 0.896332139 0.950098078 1 16.85059951 -6.647504365 1.461888564 0.933902058 0.717610659 0.902375569 0.032068119 0.116298698 0.51623392 0.013807797 0.013769977 2.25E-07 6.647504365 -0.216291399 MASPGSDS(ph)YIVRVK ddPTM_A459_MK2206_30min_R1 1 MASPGSDSYIVRVK 14 1 Q7Z698-2 Q7Z698-2 1 MAS(0.003)PGS(0.085)DS(0.828)Y(0.085)IVRVK 57.802 0.042523 8878900 827.05 929.5 1113 1030.8 943.93 740.37 749.89 1207.7 712.11 397.02 TRUE FALSE 756.7050545 868.9893811 1037.452661 1110.192395 906.3312693 782.2891096 699.8662064 1197.141206 786.1363828 446.2058349 1.69586544 1.947507883 2.325053999 2.488072337 2.031195467 1.75320233 1.568482865 2.682934898 1.761824524 1 8.801565569 -6.564048046 7.230209346 1.850461121 2.134657282 0.117300952 0.436115135 0.565969967 78.89690977 0.145016788 0.14570478 2.73E-07 6.564048046 0.284196161 MAT(ph)NGVVHVITNVLQPPANR ddPTM_A459_MK2206_30min_R1 1 MATNGVVHVITNVLQPPANR 20 0 D6RBX4 D6RBX4 TGFBI 1 MAT(0.905)NGVVHVIT(0.095)NVLQPPANR 69.72 0.015998 10171000 2858.7 1298.4 773.75 1051.4 7335.6 9896.4 10220 2588.2 1708 1332.9 TRUE FALSE 2615.552553 1213.873924 721.2300058 1132.37901 7043.407519 10456.72562 9538.242447 2565.57164 1885.552712 1498.029715 1.745995108 0.810313649 0.481452403 0.755912249 4.701780912 6.980319223 6.367191754 1.712630674 1.258688458 1 10.54885053 -6.255208106 24.81973876 4.006098758 0.905198832 0.312145507 1.940809126 554.2094096 2207465.713 0.632583824 0.795912264 5.56E-07 6.255208106 -3.100899926 MATFPGPGSS(ph)PAR ddPTM_A459_MK2206_30min_R1 2 MATFPGPGSSPAR 13 0 O43187 O43187 IRAK2 Interleukin-1 receptor-associated kinase-like 2 1 MATFPGPGS(0.15)S(0.85)PAR;MATFPGPGS(0.148)S(0.852)PAR 151.16 0.00047295 19286900 7879.7 8580.4 8730.5 8235.9 9577.6 9158.7 9188.1 8322.1 6882.7 6284.4 TRUE FALSE 7209.490137 8021.8144 8137.897985 8870.230445 9196.103911 9677.257679 8575.178614 8249.340757 7598.181295 7062.958917 1.020746435 1.135758327 1.152193872 1.255880227 1.302018604 1.370142145 1.214105691 1.167972355 1.075778776 1 12.78605699 -8.337696657 2.02524173 1.003717935 1.213348854 0.365207807 0.090264359 0.371577854 2.957035705 0.095802532 0.027434373 4.60E-09 8.337696657 0.209630919 MAVNVYS(ph)TSITQETMSR ddPTM_A459_MK2206_30min_R1 1 MAVNVYSTSITQETMSR 17 0 Q15555-5;K7ERD8;K7ENB3;M0QX52 Q15555-5 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 MAVNVY(0.012)S(0.56)T(0.428)S(0.001)ITQETMSR 74.953 0.014971 6291200 1757.7 1472 1817.7 1460.9 1597.2 1109.7 1806.8 2183.9 1702.9 1800 TRUE FALSE 1608.198385 1376.172532 1694.319588 1573.418771 1533.580142 1172.530255 1686.271669 2164.806393 1879.922549 2022.997589 0.794958132 0.68026405 0.837529218 0.777766014 0.758073144 0.579600421 0.833551003 1.070098355 0.929275724 1 10.98227889 -7.579492773 5.472072494 0.995918809 0.739718392 0.717305271 0.073398627 0.105780772 6.588983743 0.0353222 0.020151271 2.63E-08 7.579492773 -0.256200417 MAVS(ph)HMKS(ph)MRGT(ph)GNK ddPTM_A459_MK2206_30min_R2 1 MAVSHMKSMRGTGNK 15 2 A0A087WVE9;Q9HBZ2-2;Q9HBZ2 A0A087WVE9 ARNT2 Aryl hydrocarbon receptor nuclear translocator 2 3 MAVS(1)HMKS(1)MRGT(1)GNK 57.788 0.040665 0 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 MCDLVSDFDGFSER ddPTM_A459_MK2206_30min_R1 1 MCDLVSDFDGFSER 14 0 P30520 P30520 ADSS Adenylosuccinate synthetase isozyme 2 0 179.57 1.03E-08 0 299.5 306.49 232.71 253 398.99 321.21 341.11 365.85 368.74 258.28 FALSE TRUE 274.0259523 286.5374453 216.9142936 272.4861038 383.0973834 339.3966326 318.3551743 362.651412 407.0718425 290.2776763 0.94401318 0.987114989 0.747264813 0.938708437 1.319761782 1.169213689 1.096726343 1.249325875 1.402353249 1 8.181289816 -6.169758263 5.953981475 1.210770988 0.894375035 0.605873979 0.119480152 0.158621742 8.370189956 0.035469643 0.04604585 6.76E-07 6.169758263 -0.316395954 MCHNVNR ddPTM_A459_MK2206_30min_R2 3 MCHNVNR 7 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 0 ;; 129.96 0.0062651 1433810 6029.1 7048.7 5482.39 5983.64 6593.9 6963.7 7101.8 16532.6 11354.4 7784.8 FALSE TRUE 6490.692532 6698.671808 5665.170146 5494.757471 6334.990354 7228.708483 6169.325129 18693.46758 12341.98519 7530.782614 0.861888181 0.889505401 0.752268448 0.729639634 0.84121275 0.959888083 0.819214343 2.482274226 1.638871525 1 12.87858409 -7.731412864 24.999642 1.795429594 0.835898212 0.573578958 0.341538985 116.103864 96666.45016 0.149854625 0.086504249 1.86E-08 7.731412864 -0.959531382 MCS(ph)PSPDATSGTGSQR ddPTM_A459_MK2206_30min_R1 1 MCSPSPDATSGTGSQR 16 0 A0A2R8Y589;A0A2R8Y4C1;A0A2R8Y7U5;A8MST6;A0A2U3TZI9;A0A2R8Y5W6;A0A2R8Y432;A0A2R8YCP0;A0A2R8Y7A4;Q5JTW2;Q5JTW2-3;Q5JTW2-5;Q5JTW2-2 A0A2R8Y589 CEP78 Centrosomal protein of 78 kDa 1 MCS(0.92)PS(0.08)PDATSGTGSQR 138.28 0.00040509 2635200 800.25 1012.3 845.79 956.68 1028.9 924.02 1096.3 904.69 724.96 770.39 TRUE FALSE 732.1845352 946.399086 788.3801313 1030.363659 987.9167343 976.3372139 1023.167827 896.7803907 800.3221863 865.8317293 0.845642993 1.09305198 0.910546593 1.190027605 1.141003154 1.127629285 1.181716715 1.03574443 0.924339175 1 9.75794286 -4.044187827 1.230174012 1.083109457 1.87E-11 0.301157561 0.096251933 9.731071521 3.379529643 0.029066429 20.8336275 9.03E-05 4.044187827 -1.083109457 MCS(ph)PSPDATSGTGSQR ddPTM_A459_MK2206_30min_R2 2 MCSPSPDATSGTGSQR 16 0 A0A2R8Y589;A0A2R8Y4C1;A0A2R8Y7U5;A8MST6;A0A2U3TZI9;A0A2R8Y5W6;A0A2R8Y432;A0A2R8YCP0;A0A2R8Y7A4;Q5JTW2;Q5JTW2-3;Q5JTW2-5;Q5JTW2-2 A0A2R8Y589 CEP78 Centrosomal protein of 78 kDa 1 MCS(0.939)PS(0.06)PDATSGTGSQR;MCS(0.993)PS(0.007)PDATSGTGSQR 189.33 9.57E-07 7801200 17155.8 18786.1 21354.3 27798 23353 24452 24250 14931.7 26957 25770 TRUE FALSE 18469.26124 17853.20959 22066.2417 25526.81448 22436.04388 25382.53799 21065.94587 16883.32446 29301.67113 24929.12701 0.740870759 0.716158636 0.885159023 1.023975467 0.899993163 1.018188001 0.845033437 0.677252936 1.175399007 1 14.60554474 -5.345894758 4.134703232 0.932871484 0.727614687 0.322469076 0.124050959 0.263668519 8.208699821 0.032575827 0.074220024 4.51E-06 5.345894758 -0.205256797 MDCQECPEGYR ddPTM_A459_MK2206_30min_R2 2 MDCQECPEGYR 11 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 ; 138.76 0.016955 17622700 24150.8 32605 28911 32331 29810 37927 35815 27320 30481.1 29930.9 FALSE TRUE 25999.80382 30985.88311 29874.87831 29689.45388 28639.50962 39370.33856 31112.44748 30890.8178 33132.29098 28954.25718 0.897961348 1.070166743 1.031795709 1.025391661 0.989129489 1.359742656 1.074537927 1.06688345 1.144297737 1 14.82148786 MDDFECVT(ph)PK ddPTM_A459_MK2206_30min_R1 1 MDDFECVTPK 10 0 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 MDDFECVT(1)PK 105.17 0.02964 5640900 1467.3 1539.2 1177.5 1365.4 884.89 947.41 1145.1 943.29 1273.7 1056.8 TRUE FALSE 1342.49843 1438.9978 1097.574581 1470.563345 849.6429575 1001.051535 1068.712468 935.042915 1406.105673 1187.724362 1.130311436 1.211558713 0.924098735 1.238135203 0.71535365 0.842831525 0.899798389 0.787255818 1.183865312 1 10.21398435 -6.252828468 24.99201717 0.890859989 1.117712119 0.363953683 0.142351824 681.7617102 1978721.009 0.041109974 0.052240518 5.59E-07 6.252828468 0.22685213 MDDFECVT(ph)PK ddPTM_A459_MK2206_30min_R2 2 MDDFECVTPK 10 0 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 MDDFECVT(1)PK;MDDFECVT(1)PK 112.5 0.010571 0 45384 47278 41890 45930 43884 45079 44288 32904 36812 45040 TRUE FALSE 48858.63393 44930.24327 43286.59169 42177.37208 42160.89366 46794.51293 38472.9324 37204.66578 40013.84122 43570.34849 1.121373494 1.031211474 0.993487388 0.968029257 0.967651055 1.073999051 0.883007222 0.853898742 0.91837322 1 15.41105903 -1.522878745 0.374775198 0.924878138 3.538585663 0.475991441 0.056730288 60.9714895 0.837729462 0.04743456 115.20962 0.03 1.522878745 2.613707525 MDELQLFR ddPTM_A459_MK2206_30min_R2 1 MDELQLFR 8 0 P55072;C9JUP7;C9IZA5 P55072 VCP Transitional endoplasmic reticulum ATPase 0 139.97 0.03284 9048100 42896 58185 50244 61124 48845 51730 64766 43320 60397 45654 FALSE TRUE 46180.15074 55295.61751 51919.10988 56129.97367 46927.09987 53698.6214 56262.1464 48982.07274 65650.22189 44164.31372 1.045644025 1.252042947 1.175589645 1.270935037 1.062556981 1.215882618 1.273927786 1.109087148 1.48649931 1 15.43059347 -6.978317849 24.98014632 1.229102941 1.169865663 0.036853425 0.133828683 862.6848259 993900.646 0.04422557 0.038999718 1.05E-07 6.978317849 -0.059237277 MDGEATS(ph)PLPR ddPTM_A459_MK2206_30min_R2 2 MDGEATSPLPR 11 0 Q86UU1-3;Q86UU1-2;Q86UU1;A0A087WZL0 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 MDGEAT(0.032)S(0.968)PLPR;MDGEAT(0.095)S(0.905)PLPR 116.84 0.0057726 14804900 151337 152087 149183 165586 138455 137828 158805 110462 119906 139297 TRUE FALSE 162923.4771 144534.5807 154156.6868 152057.0941 133018.561 143073.1411 137953.7127 124899.7627 130335.2071 134751.7503 1.209063902 1.072598912 1.144005079 1.128423889 0.987137909 1.06175349 1.023761936 0.926887869 0.967224595 1 17.03994449 -6.366818048 0.654549019 0.963879272 1.165185449 0.701502589 0.045724686 0.478759611 0.445961332 0.031382709 0.052015914 4.30E-07 6.366818048 0.201306177 MDGTYACSYT(ph)PVK ddPTM_A459_MK2206_30min_R2 1 MDGTYACSYTPVK 13 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 1 MDGTY(0.001)ACS(0.007)Y(0.005)T(0.987)PVK 92.039 0.044399 3388900 9562.4 12764 11568 11737 13481 9972.7 13660 10283 10718 13602 TRUE FALSE 10294.5047 12130.15832 11953.67135 10778.04956 12951.6682 10352.21809 11866.42559 11627.02341 11650.23227 13158.16785 0.782366117 0.921872897 0.908460166 0.819114764 0.984306352 0.786752244 0.901829626 0.883635437 0.885399274 1 13.683671 -14.52287706 0.300865215 2.027354437 0.871045093 0.290968922 0.059393872 348.3200171 3.214799034 225.7184013 0.055664095 3.00E-15 14.52287706 -1.156309344 MDGTYKFCFSNRMSTMTPK ddPTM_A459_MK2206_30min_R2 1 MDGTYKFCFSNRMSTMTPK 19 2 F5GX39 F5GX39 TMED2 0 40.962 0.047614 0 8234.8 7720.4 7377.3 6403.6 7662.6 7345 10105 5081.6 9233.7 7493 FALSE TRUE 8865.262619 7337.016163 7623.2555 5880.405396 7361.727823 7624.519122 8778.201362 5745.782568 10036.83054 7248.504024 1.22304721 1.012211091 1.051700527 0.811257796 1.015620299 1.051874855 1.211036282 0.792685297 1.384676135 1 12.82346756 -6.998038335 14.89583008 1.087196683 1.014204023 0.038974649 0.168637216 1.639009269 12273.2368 0.058057541 0.050166876 1.00E-07 6.998038335 -0.07299266 MDMT(ph)SPEQSR ddPTM_A459_MK2206_30min_R2 2 MDMTSPEQSR 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 MDMT(0.5)S(0.5)PEQSR;MDMT(0.5)S(0.5)PEQSR 174.57 0.00018619 24269000 166408 195672 150653 231180 190919 212900 197047 158766 160619 179989 TRUE FALSE 179148.3244 185955.213 155675.6958 212291.8545 183422.5608 221002.0587 171174.4922 179517.2613 174589.3503 174115.9737 1.028902292 1.067996285 0.894091981 1.219255477 1.053450507 1.269280779 0.983106194 1.031021207 1.002718743 1 17.40968904 -10.43236139 5.789763449 0.999999968 1.063755083 0.029647691 0.103849326 4.11E-08 7.70E-09 0.099671401 0.024173854 3.70E-11 10.43236139 0.063755115 MDRDPLGGLADMFGQMPGSGIGT(ph)GPGVIQDRFSPTMGR ddPTM_A459_MK2206_30min_R1 1 MDRDPLGGLADMFGQMPGSGIGTGPGVIQDRFSPTMGR 38 2 P78344-2;P78344;H0Y3P2;D3DQV9;H0YCH5 P78344-2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 MDRDPLGGLADMFGQMPGS(0.287)GIGT(0.319)GPGVIQDRFS(0.272)PT(0.123)MGR 47.487 0.0043296 16708000 968.78 824.51 865.04 812.33 1235 949.87 989.57 1194.8 827.85 656.67 TRUE FALSE 886.3801737 770.8342491 806.3234949 874.8957974 1185.807335 1003.650819 923.5575909 1184.35399 913.90797 738.0232372 1.20101933 1.044457966 1.092544861 1.185458334 1.606734416 1.359917639 1.251393648 1.604765175 1.238318692 1 9.527522431 -6.017288417 23.24413433 1.372348124 1.111377204 0.268292337 0.171235127 321.0534586 431655.4213 0.047329643 0.062698154 9.61E-07 6.017288417 -0.260970919 MDRDPLGGLADMFGQMPGSGIGTGPGVIQDRFS(ph)PTMGR ddPTM_A459_MK2206_30min_R1 1 MDRDPLGGLADMFGQMPGSGIGTGPGVIQDRFSPTMGR 38 2 P78344-2;P78344;H0Y3P2;D3DQV9;H0YCH5 P78344-2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 MDRDPLGGLADMFGQMPGS(0.06)GIGT(0.06)GPGVIQDRFS(0.641)PT(0.24)MGR 49.504 0.030232 16119000 1353.9 1216.3 1350 1254.2 1678.2 1076.6 1401 1774.9 1099.5 868.13 TRUE FALSE 1238.743695 1137.118649 1258.365761 1350.798701 1611.35374 1137.556162 1307.541846 1759.382236 1213.79696 975.6804984 1.269620226 1.165462106 1.289731386 1.38446828 1.651517831 1.165910524 1.340133218 1.803236038 1.244051676 1 9.930264982 -5.636742402 3.376594387 1.405642077 1.219177939 0.057198831 0.218400903 0.529840373 11.76528203 0.05985738 0.112171404 2.31E-06 5.636742402 -0.186464138 MDRT(ph)PPPPT(ph)LSPAAITVGR ddPTM_A459_MK2206_30min_R1 2 MDRTPPPPTLSPAAITVGR 19 1 Q8NDX5-2;Q8NDX5;Q8NDX5-7;E7EX82;H7C4H9 Q8NDX5-2 PHC3 Polyhomeotic-like protein 3 2 MDRT(1)PPPPT(0.509)LS(0.479)PAAIT(0.012)VGR;MDRT(1)PPPPT(0.998)LS(0.002)PAAITVGR 182.67 5.06E-13 32353000 16854.6 16711.7 17288.6 15055.4 17721.2 16752.4 17413.3 16245.8 15345.9 14004.3 TRUE FALSE 15421.02776 15623.76529 16115.098 16214.96952 17015.32708 17700.90641 16251.69053 16103.76468 16941.16122 15739.25841 0.97978109 0.992662099 1.023879117 1.030224493 1.081075527 1.12463408 1.032557577 1.02315905 1.07636337 1 13.94207995 -5.543780314 1.618752752 1.058497054 0.98257064 0.396011721 0.033161333 0.42265506 2.128283373 0.010667364 0.031317487 2.86E-06 5.543780314 -0.075926414 MDRT(ph)PPPPT(ph)LSPAAITVGR ddPTM_A459_MK2206_30min_R2 6 MDRTPPPPTLSPAAITVGR 19 1 Q8NDX5-2;Q8NDX5;Q8NDX5-7;E7EX82;H7C4H9 Q8NDX5-2 PHC3 Polyhomeotic-like protein 3 2 MDRT(1)PPPPT(0.818)LS(0.104)PAAIT(0.079)VGR;MDRT(1)PPPPT(0.884)LS(0.109)PAAIT(0.007)VGR;MDRT(1)PPPPT(0.936)LS(0.064)PAAITVGR;MDRT(1)PPPPT(0.947)LS(0.053)PAAITVGR;MDRT(1)PPPPT(0.588)LS(0.4)PAAIT(0.012)VGR;MDRT(1)PPPPT(0.933)LS(0.064)PAAIT(0.003)VGR 126.86 0.00052622 39548000 110484 131169 116676 143476 133672 137612 134611 99414 125093 128490 TRUE FALSE 118942.74 124655.3382 120565.9196 131753.5518 128423.3656 142848.9211 116936.414 112407.7511 135973.363 124297.3818 0.956920719 1.002879838 0.969979559 1.059986541 1.033194455 1.149251247 0.940779382 0.904345285 1.093935858 1 16.92343638 -5.737089046 24.89885365 1.023835373 0.979221999 0.101226581 0.067025734 635.5114024 649822.4153 0.01911355 0.03308438 1.83E-06 5.737089046 -0.044613374 MDRT(ph)PPPPTLS(ph)PAAITVGR ddPTM_A459_MK2206_30min_R1 2 MDRTPPPPTLSPAAITVGR 19 1 Q8NDX5-2;Q8NDX5;Q8NDX5-7;E7EX82;H7C4H9 Q8NDX5-2 PHC3 Polyhomeotic-like protein 3 2 MDRT(1)PPPPT(0.172)LS(0.828)PAAITVGR;MDRT(1)PPPPT(0.492)LS(0.508)PAAIT(0.001)VGR 130.57 0.0024018 17594100 13589.6 10398.7 11235.3 9391.8 16387.9 14540.9 15834 14214.3 9405.3 9354.7 TRUE FALSE 12433.73316 9721.74274 10472.67914 10115.15806 15735.13524 15364.19319 14777.74275 14090.02587 10383.01459 10513.63086 1.1826298 0.924679863 0.996104893 0.962099411 1.496641403 1.461359391 1.40557938 1.340167451 0.987576483 1 13.35997337 -6.244711431 24.90250139 1.314053931 1.008380452 0.344974322 0.17577673 798.6362268 1188910.388 0.052278054 0.067298272 5.69E-07 6.244711431 -0.305673479 MDRT(ph)PPPPTLS(ph)PAAITVGR ddPTM_A459_MK2206_30min_R2 3 MDRTPPPPTLSPAAITVGR 19 1 Q8NDX5-2;Q8NDX5;Q8NDX5-7;E7EX82;H7C4H9 Q8NDX5-2 PHC3 Polyhomeotic-like protein 3 2 MDRT(1)PPPPT(0.011)LS(0.985)PAAIT(0.004)VGR;MDRT(1)PPPPT(0.075)LS(0.921)PAAIT(0.004)VGR;MDRT(1)PPPPT(0.35)LS(0.648)PAAIT(0.002)VGR 120.9 0.01768 7287300 31575.9 37139 35247.2 39539 40215 41370 38532 27813.5 30109.6 30942.6 TRUE FALSE 33993.37518 35294.73127 36422.32406 36308.53722 38635.95704 42944.36434 33472.70211 31448.81995 32728.47858 29932.9455 1.135650856 1.179126567 1.216797193 1.212995802 1.290750255 1.434685549 1.118256208 1.050642342 1.093393184 1 14.86944663 -7.509162816 24.48566756 1.060100462 1.244276267 0.568971229 0.078104407 405.5630627 724015.2613 0.036659213 0.023521191 3.10E-08 7.509162816 0.184175805 MDRT(ph)PPPPTLSPAAITVGR ddPTM_A459_MK2206_30min_R1 4 MDRTPPPPTLSPAAITVGR 19 1 Q8NDX5-2;Q8NDX5;Q8NDX5-7;E7EX82;H7C4H9 Q8NDX5-2 PHC3 Polyhomeotic-like protein 3 1 MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR 175.77 9.61E-12 30248300 3926.24 3702.99 4255.36 3016.63 3879.12 3467.95 3332.13 3769.85 3317.57 3202.83 TRUE FALSE 3592.29267 3461.924678 3966.518019 3248.971365 3724.606436 3664.302332 3109.849688 3736.890599 3662.443274 3599.620761 0.997964205 0.961747058 1.101926643 0.902587128 1.034721901 1.017968996 0.863938146 1.038134528 1.017452537 1 11.8136292 MDRT(ph)PPPPTLSPAAITVGR ddPTM_A459_MK2206_30min_R2 8 MDRTPPPPTLSPAAITVGR 19 1 Q8NDX5-2;Q8NDX5;Q8NDX5-7;E7EX82;H7C4H9 Q8NDX5-2 PHC3 Polyhomeotic-like protein 3 1 MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR 109.23 0.00097717 123473300 110846.2 130234.4 120611.4 132885.4 136348.2 129257.9 131916.9 115561.5 110142.2 124873.1 TRUE FALSE 119332.6703 123767.1491 124632.5239 122028.2377 130994.4846 134176.9 114596.0526 130665.7848 119722.1695 120798.501 0.98786549 1.024575206 1.031738994 1.010180066 1.084404885 1.11074971 0.948654591 1.081683827 0.99108986 1 16.88224303 -4.222138558 1.213569308 1.03692218 0.874214392 0.069829811 0.046553099 13.25679656 6.491825105 0.013594723 3.781320871 6.00E-05 4.222138558 -0.162707788 MDS(ph)DEDEKEGEEEK ddPTM_A459_MK2206_30min_R1 1 MDSDEDEKEGEEEK 14 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 MDS(1)DEDEKEGEEEK 146.96 0.0023155 3904300 623.2 1190.6 1295.9 1236.5 570.65 382.98 811.09 761.71 1465.8 1322.2 TRUE FALSE 570.1935674 1113.091724 1207.937919 1331.735444 547.9198021 404.6639966 756.983666 755.0504498 1618.175155 1486.004118 0.383709278 0.749050228 0.812876562 0.896185568 0.368720245 0.272316874 0.509408862 0.508107912 1.088943924 1 10.5372224 -8.26274006 24.99999916 1.044472022 0.570322825 0.498887059 0.193073778 110.3440129 2120766.324 0.1743369 0.054560918 5.46E-09 8.26274006 -0.474149197 MDS(ph)DEDEKEGEEEKVAK ddPTM_A459_MK2206_30min_R2 2 MDSDEDEKEGEEEKVAK 17 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK 76.704 0.023399 28459000 52502 66277 80191 55278 77033 30897 77162 60565 53259 78286 TRUE FALSE 56521.59349 62985.78056 82864.52792 50761.61057 74008.29736 32072.80699 67030.53671 68481.05345 57891.37155 75731.53423 0.746341588 0.831698198 1.094187894 0.670283668 0.977245451 0.423506632 0.885107339 0.904260744 0.764428875 1 16.20860654 -10.989988 3.111837404 1.004071102 0.814043267 0.09706696 0.172872134 92841868.34 110171895.5 3268204.958 0.04138821 1.02E-11 10.989988 -0.190027835 MDS(ph)FDEDLAR ddPTM_A459_MK2206_30min_R1 2 MDSFDEDLAR 10 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 MDS(1)FDEDLAR;MDS(1)FDEDLAR 155.33 0.00052713 4025100 3367 3586.8 3573.1 2796.9 2799.2 2923.1 3278.7 3090.6 3220 3360.1 TRUE FALSE 3080.618969 3353.298668 3330.567927 3012.317723 2687.701937 3088.603396 3059.983905 3063.57921 3554.730523 3776.374555 0.81576097 0.887967711 0.881948514 0.79767451 0.711714873 0.81787528 0.810296717 0.811248769 0.94130772 1 11.88278615 -8.395645971 3.116702915 0.998186171 0.816636787 0.651665594 0.045862578 0.163942213 2.935186115 0.049224544 0.013237132 4.02E-09 8.395645971 -0.181549385 MDS(ph)FDEDLARPSGLLAQER ddPTM_A459_MK2206_30min_R1 1 MDSFDEDLARPSGLLAQER 19 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 MDS(1)FDEDLARPSGLLAQER 73.796 0.0058257 3687000 311.31 363.15 240.01 213.94 237.14 299.65 346.31 302.66 273.21 401.42 TRUE FALSE 284.8314497 339.508869 223.7187899 230.4176959 227.6942116 316.615924 323.2082918 300.0138755 301.6111572 451.1509402 0.631344023 0.752539425 0.49588457 0.51073305 0.504696303 0.701795997 0.71640833 0.664996676 0.668537135 1 8.817466382 -9.636004442 0.436510273 1.059132296 0.592725949 0.656407218 0.083541736 3.437860533 0.784925074 0.439881092 0.055993207 2.31E-10 9.636004442 -0.466406346 MDSFDEDLARPSGLLAQER ddPTM_A459_MK2206_30min_R1 1 MDSFDEDLARPSGLLAQER 19 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 88.951 0.013427 0 730.32 617.58 575.19 641.5 705.98 499.18 653.06 749.68 623.02 382.91 FALSE TRUE 668.2024489 577.3754297 536.1477054 690.9084412 677.8593217 527.4431402 609.495559 743.1256268 687.7851585 430.3477816 1.552703366 1.34164844 1.245847494 1.605465325 1.57514306 1.225620679 1.416286048 1.726802504 1.598207747 1 8.749359222 -5.761208138 25 1.474434501 1.37622467 0.01288335 0.211195853 23.8708328 2580109.234 0.058301937 0.09336339 1.73E-06 5.761208138 -0.098209831 MDSNFGLAGLPGS(ph)PK ddPTM_A459_MK2206_30min_R1 2 MDSNFGLAGLPGSPK 15 0 O43463;O43463-2 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 1 MDSNFGLAGLPGS(1)PK;MDSNFGLAGLPGS(1)PK 174.68 2.39E-05 40441900 10357.7 12665.3 12466.5 10823.8 9164.3 8238.8 9461.2 10037.9 10617.3 9918 TRUE FALSE 9476.723225 11840.78667 11620.30871 11657.45095 8799.266525 8705.273736 8830.060611 9950.139699 11721.00633 11146.71672 0.850180682 1.062266761 1.042487129 1.045819253 0.789404337 0.780972008 0.792166952 0.892652065 1.051520966 1 13.4443312 -4.443109281 12.8652161 0.930232642 0.000105647 0.048540861 0.112052883 1030834.577 4646837.793 0.031277252 25233767.96 3.60E-05 4.443109281 -0.930126995 MDSNFGLAGLPGS(ph)PK ddPTM_A459_MK2206_30min_R2 2 MDSNFGLAGLPGSPK 15 0 O43463;O43463-2 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 1 MDSNFGLAGLPGS(1)PK;MDSNFGLAGLPGS(1)PK 125.86 0.0011929 27238000 105095 106085 108233 83077 103122 65682 130040 94521 83490 105176 TRUE FALSE 113141.154 100816.9732 111841.4342 76289.34335 99072.91213 68181.57454 112965.5918 106875.2192 90751.80928 101744.1157 1.112016682 0.990887507 1.099242284 0.749815779 0.973745866 0.670127939 1.110291155 1.050431452 0.891961256 1 16.63458583 -5.688927633 25 0.922639641 1.059733498 0.215031084 0.127963562 74.03888586 25524.33658 0.035030685 0.060674915 2.05E-06 5.688927633 0.137093856 MDYEDDRLR ddPTM_A459_MK2206_30min_R1 3 MDYEDDRLR 9 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 0 ;; 141.52 0.006198 96107000 11112.3 10342 10156.6 8874 13910.3 13360.6 14199.2 10553.3 8530.4 6706.7 FALSE TRUE 10167.14053 9668.73392 9467.19829 9557.477018 13356.2233 14117.06563 13251.99728 10461.03361 9417.165606 7537.576629 1.348860653 1.282737728 1.256000271 1.267977427 1.771951909 1.872891822 1.758124385 1.387851046 1.249362503 1 12.87988505 -6.228183842 24.07505155 1.55697064 1.286104628 0.13630863 0.250022205 690.2149592 499674.2678 0.076592668 0.098871526 5.91E-07 6.228183842 -0.270866012 MDYEDDRLR ddPTM_A459_MK2206_30min_R2 1 MDYEDDRLR 9 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 0 104.06 0.041389 44386000 52989 79578 70255 95484 81619 126000 83023 65390 97545 63413 FALSE TRUE 57045.87858 75626.27224 72597.26664 87682.65176 78414.22796 130795.0183 72121.98037 73936.69752 106029.2878 61343.839 0.929936559 1.232825879 1.183448376 1.42936362 1.278273894 2.132162258 1.17570047 1.205283183 1.728442326 1 15.90463084 -5.069425576 1.032322456 1.446601667 0.860066729 0.186576075 0.306380784 2.055053057 2.446552389 0.102672232 1.197461542 8.52E-06 5.069425576 -0.586534938 MEDEGGFPVPQENGQPES(ph)PR ddPTM_A459_MK2206_30min_R1 2 MEDEGGFPVPQENGQPESPR 20 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 MEDEGGFPVPQENGQPES(1)PR;MEDEGGFPVPQENGQPES(1)PR 211.75 5.79E-17 6899200 2482.18 2494.93 2192.59 1736.68 2069.98 2164.35 2539.05 1863.66 2084.34 2139.95 TRUE FALSE 2271.057557 2332.509604 2043.7631 1870.439395 1987.528313 2286.893627 2369.674607 1847.366217 2301.014602 2405.063162 0.944281877 0.969832993 0.849775229 0.777709053 0.826393396 0.950866349 0.985285811 0.768115468 0.956737702 1 11.23185907 -6.773335891 24.99370979 0.921026072 0.872294156 0.113411601 0.078847955 671.7478699 1411284.658 0.029633984 0.026339096 1.69E-07 6.773335891 -0.048731916 MEDEGGFPVPQENGQPES(ph)PR ddPTM_A459_MK2206_30min_R2 2 MEDEGGFPVPQENGQPESPR 20 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 MEDEGGFPVPQENGQPES(1)PR;MEDEGGFPVPQENGQPES(1)PR 188.56 1.36E-15 5719700 12637.7 12428.4 13198.6 12921.1 12376.4 12787 10786.1 9713.7 10524.1 13874.8 TRUE FALSE 13605.25203 11811.22373 13638.63474 11865.4048 11890.44035 13273.61825 9369.872114 10983.31394 11439.46719 13422.06641 1.013648093 0.879985493 1.016135245 0.884022209 0.885887462 0.988939992 0.698094602 0.818302756 0.852288079 1 13.71231918 -7.230812873 24.99835897 0.827029847 0.939631178 0.255291876 0.08399894 835.9896816 682363.1749 0.030589743 0.023692303 5.88E-08 7.230812873 0.11260133 MEDEGGFPVPQENGQPES(ph)PRR ddPTM_A459_MK2206_30min_R2 2 MEDEGGFPVPQENGQPESPRR 21 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 MEDEGGFPVPQENGQPES(1)PRR;MEDEGGFPVPQENGQPES(1)PRR 74.123 0.0016931 5057800 29330 32323 30022.1 31956.4 26108 27902.9 30644.2 24231.7 25714.8 26671.1 TRUE FALSE 31575.52735 30717.88682 31023.02183 29345.4599 25082.86874 28964.76441 26620.57973 27398.86639 27951.42682 25800.82419 1.223818554 1.190577735 1.202404295 1.137384592 0.972173158 1.122629424 1.031772455 1.061937641 1.083354028 1 14.65512953 -6.004990604 4.386529834 1.051201349 1.201462689 0.761928067 0.040407934 0.094900928 4.552116703 0.011329114 0.016134535 9.89E-07 6.004990604 0.15026134 MEEDS(ph)IRLPAHLR ddPTM_A459_MK2206_30min_R1 2 MEEDSIRLPAHLR 13 1 P41212;H0YG25 P41212 ETV6 Transcription factor ETV6 1 MEEDS(1)IRLPAHLR;MEEDS(1)IRLPAHLR 136.57 0.0068381 13702000 1623.82 1455.61 1735.38 1332.5 1680.35 1519.93 1669.46 1451.05 1219.79 1508.87 TRUE FALSE 1485.705582 1360.849524 1617.587241 1435.129381 1613.418101 1605.987123 1558.09337 1438.363623 1346.591536 1695.800207 0.876108858 0.802482226 0.953878431 0.846284471 0.951419922 0.947037933 0.918795365 0.848191678 0.794074402 1 10.72775049 -5.253767572 24.86610579 0.903241999 0.839295546 0.163489323 0.061081886 1048.158169 3397303.219 0.015678463 0.039810473 5.57E-06 5.253767572 -0.063946454 MEEEGTEDNGLEDDS(ph)R ddPTM_A459_MK2206_30min_R2 2 MEEEGTEDNGLEDDSR 16 0 Q14151;K7ERX3 Q14151 SAFB2 Scaffold attachment factor B2 1 MEEEGTEDNGLEDDS(1)R;MEEEGTEDNGLEDDS(1)R 154.47 0.00011292 6237300 18172.8 10349.2 14101.7 11691.7 9102.4 12493.9 15401.2 10722.3 8791.2 15842.1 TRUE FALSE 19564.12354 9835.273777 14571.84364 10736.45071 8744.99404 12969.36412 13379.00394 12123.74143 9555.842685 15325.17357 1.276600454 0.641772423 0.950843628 0.700576125 0.570629363 0.846278449 0.873008314 0.791099779 0.623538953 1 13.90361579 -4.752201574 24.99825827 0.772677398 1.276601436 0.548106909 0.135883051 274.5493788 742899.7659 0.032826183 0.401196685 1.77E-05 4.752201574 0.503924038 MEEEQHHWDDR ddPTM_A459_MK2206_30min_R1 1 MEEEQHHWDDR 11 0 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 0 147.24 0.00094125 4456000 2434.3 2495 2673.4 2111.9 2661.2 2708.1 2905.4 2034.2 2638.7 2624.1 FALSE TRUE 2227.250002 2332.575047 2491.937057 2274.558904 2555.198769 2861.430282 2711.586067 2016.415204 2913.002308 2949.193319 0.755206513 0.790919684 0.84495548 0.771247815 0.866405994 0.97024168 0.919433138 0.683717541 0.987728505 1 11.52610468 -6.406201184 4.924737204 0.895303334 0.795105285 0.29374488 0.086753068 0.357348524 12.98816883 0.027566325 0.031211227 3.92E-07 6.406201184 -0.100198049 MEEEQHHWDDR ddPTM_A459_MK2206_30min_R2 1 MEEEQHHWDDR 11 0 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 0 89.266 0.016627 5745200 24380 17947 19528 13962 20422 26479 22112 12593 19379 18891 FALSE TRUE 26246.55155 17055.77808 20179.05377 12821.25994 19620.12967 27486.6769 19208.66784 14238.94834 21064.55039 18274.58822 1.436232173 0.93330574 1.10421387 0.70158954 1.073629098 1.504092819 1.05111358 0.779166577 1.152668949 1 14.15755128 -7.530128505 24.97527092 0.962578665 1.109463935 0.07362781 0.23073557 533.7720053 1838801.321 0.111664056 0.064645906 2.95E-08 7.530128505 0.14688527 MEEEQHHWDDRR ddPTM_A459_MK2206_30min_R1 1 MEEEQHHWDDRR 12 1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 0 99.343 0.009753 3509800 1694.6 1146.2 1512.5 1524.2 1730.7 1386 2063.5 1261.3 1089.9 844.73 FALSE TRUE 1550.465371 1071.582172 1409.835714 1641.594148 1661.762554 1464.474122 1925.84768 1250.272587 1203.199005 949.3815298 1.633132016 1.128716052 1.485004363 1.729119534 1.750363265 1.542555944 2.0285287 1.316933759 1.267350341 1 9.890844172 -8.253815622 2.276717598 1.054892908 1.596253038 0.419855364 0.227020709 0.311409089 2.938423073 0.220879447 0.064096576 5.57E-09 8.253815622 0.541360129 MEGAGY(ph)RVVFEK ddPTM_A459_MK2206_30min_R1 1 MEGAGYRVVFEK 12 1 Q9HA65;M0QXA2;Q9HA65-3 Q9HA65 TBC1D17 TBC1 domain family member 17 1 MEGAGY(1)RVVFEK 106.2 0.011231 0 1246.2 1610.2 1568.4 1280.7 1786.9 1126.1 1598 1575 1047.7 1019.3 TRUE FALSE 1140.204146 1505.375687 1461.941378 1379.339736 1715.723989 1189.858809 1491.400336 1561.229941 1156.612164 1145.578579 0.995308542 1.314074577 1.276159841 1.204055104 1.497692101 1.038653158 1.301875194 1.362830948 1.009631452 1 10.16186071 -8.279736975 23.55377643 1.004815476 1.253481939 0.329607886 0.139074722 490.5108822 631403.2981 0.126516905 0.032985268 5.25E-09 8.279736975 0.248666463 MEGGGAEVHAQLPS(ph)LEGDLRGPDVK ddPTM_A459_MK2206_30min_R1 1 MEGGGAEVHAQLPSLEGDLRGPDVK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MEGGGAEVHAQLPS(1)LEGDLRGPDVK 53.342 0.0077275 2369500 2374.8 1485.7 1724.7 1541.8 1492.4 1525.9 1772 1830.9 1453.2 1535.8 TRUE FALSE 2172.810789 1388.98066 1607.632169 1660.549703 1432.954548 1612.295139 1653.793113 1814.892634 1604.26534 1726.066499 1.258822178 0.80470866 0.93138484 0.962042716 0.830185018 0.934086341 0.958128273 1.051461595 0.929434261 1 10.75327233 -9.727719979 12.39479728 0.999999999 0.954492914 0.005206842 0.118977126 0 0 0.109413082 0.02653657 1.87E-10 9.727719979 -0.045507084 MEGS(ph)DFESSGGR ddPTM_A459_MK2206_30min_R2 2 MEGSDFESSGGR 12 0 E9PEN0;A0A1B0GW41;Q8WYH8-2;Q8WYH8 E9PEN0 ING5 Inhibitor of growth protein 5 1 MEGS(1)DFESSGGR;MEGS(1)DFESSGGR 203.88 4.09E-05 44248000 82848 100127 80709 74931 93434 114838 98555 74689 94376 80421 TRUE FALSE 89190.90658 95154.83878 83399.79778 68808.89761 89765.31169 119208.2406 85614.61011 84451.10875 102584.6539 77796.86936 1.146458814 1.223119125 1.072019973 0.884468722 1.15384221 1.532301255 1.100489143 1.085533511 1.318621877 1 16.24742448 MEIDES(ph)NAGSSKEEAGETSPADESGAPK ddPTM_A459_MK2206_30min_R2 1 MEIDESNAGSSKEEAGETSPADESGAPK 28 1 Q9UKY1 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 1 MEIDES(0.646)NAGS(0.141)S(0.141)KEEAGET(0.036)S(0.036)PADESGAPK 57.673 0.0035008 4621900 14131 14020 9797.9 11670 10629 8681.7 13241 11967 9237.9 16325 TRUE FALSE 15212.88022 13323.78719 10124.5571 10716.52367 10211.65205 9012.088177 11502.44079 13531.12799 10041.39584 15792.31659 0.96330897 0.843687949 0.641106518 0.678590985 0.646621539 0.570662836 0.728356776 0.856817169 0.635840587 1 13.9469352 -9.925867813 12.83909519 0.999999999 0.725318346 0.326884593 0.116337842 0 0 0.119502128 0.028983523 1.19E-10 9.925867813 -0.274681653 MEIDESNAGSS(ph)KEEAGETSPADESGAPK ddPTM_A459_MK2206_30min_R1 1 MEIDESNAGSSKEEAGETSPADESGAPK 28 1 Q9UKY1 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 1 MEIDES(0.034)NAGS(0.263)S(0.676)KEEAGET(0.021)S(0.007)PADESGAPK 81.94 0.0026284 0 623.16 859.54 927.35 560.77 536.15 561.42 607.51 695.38 561.06 541.08 TRUE FALSE 570.1569697 803.5837898 864.4040657 603.9606026 514.7940102 593.2071152 566.9841164 689.300366 619.3841948 608.1130753 0.937583803 1.321438105 1.421452853 0.993171545 0.846543235 0.975488177 0.932366264 1.133506899 1.018534578 1 9.2481958 -5.853049078 10.12398021 0.982095756 1.235982376 0.40877715 0.132763248 0.32170465 32.77927614 0.038416523 0.057055741 1.40E-06 5.853049078 0.253886621 MEIGDTLSTAEES(ph)SPPK ddPTM_A459_MK2206_30min_R1 1 MEIGDTLSTAEESSPPK 17 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 MEIGDTLSTAEES(0.637)S(0.363)PPK 209.53 3.99E-09 13113000 3941.3 4928.9 5510.8 3744.4 2716.1 2890.7 3754.9 3221.4 5387.9 5186.8 TRUE FALSE 3606.071738 4608.027714 5136.74225 4032.794337 2607.911986 3054.368936 3504.417472 3193.235639 5947.991486 5829.379942 0.618602969 0.790483338 0.881181584 0.691805025 0.447373822 0.523961204 0.601164705 0.54778307 1.020347197 1 12.50912672 -8.269524867 24.74833345 1.010173697 0.64143456 0.604956965 0.120337643 453.039052 1386657.153 0.125255716 0.03462535 5.38E-09 8.269524867 -0.368739137 MEIGDTLSTAEES(ph)SPPK ddPTM_A459_MK2206_30min_R2 3 MEIGDTLSTAEESSPPK 17 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 MEIGDTLSTAEES(0.617)S(0.383)PPK;MEIGDTLSTAEES(0.977)S(0.023)PPK;MEIGDTLSTAEES(0.917)S(0.083)PPK 130.66 0.001541 19873700 116987 90344 106894 91262 95036 65996 118351 91860 69769 122253 TRUE FALSE 125943.6147 85857.64833 110457.7926 83805.60267 91304.40912 68507.52403 102811.3715 103866.4174 75837.38151 118263.8946 1.064937148 0.725983603 0.933994208 0.70863219 0.772039593 0.579276746 0.869338625 0.878259741 0.641255573 1 16.85165017 -4.75425625 24.99598251 0.783371307 1.064937639 0.301525966 0.125247208 307.2362268 1069034.162 0.029773662 0.296055719 1.76E-05 4.75425625 0.281566332 MEIGDTLSTAEESS(ph)PPK ddPTM_A459_MK2206_30min_R1 3 MEIGDTLSTAEESSPPK 17 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 MEIGDTLSTAEES(0.021)S(0.979)PPK;MEIGDTLSTAEES(0.063)S(0.937)PPK;MEIGDTLSTAEES(0.047)S(0.953)PPK 269.05 1.57E-51 30476700 7990 10951.5 10398.7 8012.6 6131 5341.1 7849.8 7265.1 10600.9 10813.8 TRUE FALSE 7310.408543 10238.55536 9692.865216 8629.73184 5886.789287 5643.508466 7326.154165 7201.581997 11702.90149 12153.49518 0.60150668 0.84243711 0.797537257 0.710061732 0.484370068 0.464352713 0.602802244 0.592552339 0.962924765 1 13.56908365 -8.26969434 20.44350301 0.981463756 0.639614035 0.59065733 0.114702408 44.78431331 110890.8156 0.117730058 0.03313754 5.37E-09 8.26969434 -0.341849721 MEIGDTLSTAEESS(ph)PPK ddPTM_A459_MK2206_30min_R2 1 MEIGDTLSTAEESSPPK 17 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 MEIGDT(0.002)LS(0.001)T(0.017)AEES(0.094)S(0.885)PPK 97.823 0.020624 3123100 24278 20059 24413 21424 22086 12975 26483 20063 15120 29073 TRUE FALSE 26136.74235 19062.89923 25226.91724 19673.59067 21218.79267 13468.77272 23005.75029 22685.30299 16435.11027 28124.35039 0.929327859 0.677807628 0.896977775 0.699521603 0.754463387 0.478900758 0.818001126 0.806607181 0.584372974 1 14.77953215 -4.750128391 24.79601522 0.737638412 0.929328324 0.127789579 0.141840992 913.9185941 2003355.539 0.033621671 0.506140805 1.78E-05 4.750128391 0.191689912 MEISAELPQT(ph)PQR ddPTM_A459_MK2206_30min_R1 2 MEISAELPQTPQR 13 0 H3BS20;H3BNQ6;A0A087WTJ9;Q8IWV7-2;Q8IWV7 H3BS20 UBR1 E3 ubiquitin-protein ligase UBR1 1 MEISAELPQT(1)PQR;MEISAELPQT(1)PQR 144.88 0.0015108 20227000 2776.1 2795.58 3093.76 2421.06 2994.78 2804.36 3012.1 2625.47 2761.32 2829.89 TRUE FALSE 2539.978117 2613.587234 2883.764191 2607.530461 2875.491571 2963.14044 2811.168305 2602.515793 3048.369095 3180.478138 0.798615179 0.82175922 0.906707755 0.819854861 0.904106693 0.931665087 0.883882292 0.818278158 0.958462521 1 11.63502795 -12.22675312 0.020077365 2.007013841 1.35E-06 0.546287562 0.043543765 1766.488516 4.111279892 249.6147069 168.0641229 5.93E-13 12.22675312 -2.007012491 MEITIRNS(ph)PYR ddPTM_A459_MK2206_30min_R1 1 MEITIRNSPYR 11 1 P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;A0A087X1I0;Q9UQ88-9;A0A087WYI9 P21127 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 MEIT(0.001)IRNS(0.999)PYR 73.36 0.031867 6924700 3902.5 4205.7 4235.3 3506.1 3413.8 2838.5 3015.8 3324.2 2693.3 2746.8 TRUE FALSE 3570.571882 3931.908166 3947.819636 3776.14043 3277.821117 2999.213417 2814.621485 3295.13687 2973.278173 3087.094321 1.1566125 1.273659874 1.278814064 1.223202156 1.061781979 0.971532809 0.911738091 1.067391057 0.963131626 1 11.59203385 -6.367147205 2.72669184 0.983606353 1.24271647 0.858640345 0.047982596 0.097592501 1.410387701 0.016224242 0.019026401 4.29E-07 6.367147205 0.259110117 MEITIRNS(ph)PYR ddPTM_A459_MK2206_30min_R2 1 MEITIRNSPYR 11 1 P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;A0A087X1I0;Q9UQ88-9;A0A087WYI9 P21127 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 MEIT(0.141)IRNS(0.851)PY(0.008)R 77.644 0.026996 21136000 42117 57069 53519 70222 60561 68978 62915 36962 57703 45247 TRUE FALSE 45341.5099 54235.03645 55303.29675 64484.63797 58183.07085 71603.00613 54654.18493 41793.06031 62721.90264 43770.5941 1.035889753 1.239074716 1.263480606 1.473241095 1.329273044 1.6358701 1.248650745 0.954820495 1.432968959 1 15.41767435 -9.110735398 0.683161051 0.999974251 1.311272358 0.156882043 0.191065472 3.831749462 2.792770793 0.250147371 0.075440989 7.75E-10 9.110735398 0.311298107 MEPGEELEEEGS(ph)PGGR ddPTM_A459_MK2206_30min_R2 2 MEPGEELEEEGSPGGR 16 0 Q9H3H3-1;Q9H3H3;Q9H3H3-3 Q9H3H3-1 C11orf68 UPF0696 protein C11orf68 1 MEPGEELEEEGS(1)PGGR;MEPGEELEEEGS(1)PGGR 205.66 9.92E-08 9456300 16700.6 9314.2 10501.2 13165.6 8736.7 10760.5 14180.1 11463.6 10457.5 12636.5 TRUE FALSE 17979.21078 8851.670372 10851.30477 12089.92837 8393.65326 11169.99837 12318.23584 12961.93188 11367.07445 12224.17204 1.4707917 0.724112058 0.887692412 0.989018179 0.686643908 0.913763184 1.007694901 1.060352541 0.929885019 1 13.57744913 -10.1983309 15.34427537 1 0.949386438 0 0.203564519 0 0 0.189190309 0.04588539 6.33E-11 10.1983309 -0.050613562 MES(ph)HSEDEDLAGAVGGLGWNSR ddPTM_A459_MK2206_30min_R1 1 MESHSEDEDLAGAVGGLGWNSR 22 0 Q96MH2;K7ESM2;K7ELS4;K7EJA3;K7ERG7;K7EIM4 Q96MH2 HEXIM2 Protein HEXIM2 1 MES(0.551)HS(0.449)EDEDLAGAVGGLGWNSR 96.181 0.00013458 5442900 2061 2239 2249.6 1491.8 2264.1 1999.9 2174.9 2111.4 1872 1950.6 TRUE FALSE 1885.701127 2093.240693 2096.90342 1606.698694 2173.916103 2113.13261 2029.816389 2092.940252 2066.601099 2192.255054 0.860165027 0.95483447 0.956505228 0.732897703 0.991634663 0.963908194 0.925903391 0.954697424 0.942682785 1 11.09819994 MESAECLEMTYVPNIDRIS(ph)PEK ddPTM_A459_MK2206_30min_R1 4 MESAECLEMTYVPNIDRISPEK 22 1 Q9ULD2;Q9ULD2-5;H0YC63;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 MESAECLEMT(0.001)YVPNIDRIS(0.999)PEK;MESAECLEMT(0.001)Y(0.002)VPNIDRIS(0.997)PEK;MESAECLEMTYVPNIDRIS(1)PEK;MESAECLEMTYVPNIDRIS(1)PEK 117.51 1.83E-05 63648700 5796.67 6230.04 5723.81 5359.84 4863.85 4031.06 4728.32 4821.78 5333.27 4336.54 TRUE FALSE 5303.632777 5824.463264 5335.293725 5772.655805 4670.112555 4259.295134 4412.9024 4779.623686 5887.682502 4873.783314 1.08819626 1.195059954 1.094692435 1.18443013 0.958210953 0.873919676 0.905436724 0.980680383 1.20803124 1 12.2508264 -6.266733753 24.64421506 0.976943679 1.14120634 0.409850536 0.089312513 361.9669935 1684878.66 0.028691521 0.033487372 5.41E-07 6.266733753 0.164262661 MESAECLEMTYVPNIDRIS(ph)PEK ddPTM_A459_MK2206_30min_R2 5 MESAECLEMTYVPNIDRISPEK 22 1 Q9ULD2;Q9ULD2-5;H0YC63;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 MESAECLEMTYVPNIDRIS(1)PEK;MESAECLEMTYVPNIDRIS(1)PEK;MESAECLEMTY(0.001)VPNIDRIS(0.999)PEK;MESAECLEMTYVPNIDRIS(1)PEK;MESAECLEMTYVPNIDRIS(1)PEK 104.7 3.73E-05 18067700 41402.1 50093.3 48827.2 51338.9 43256 36659.6 48691.3 37422.2 36125.2 46287.5 TRUE FALSE 44571.87661 47605.73956 50455.07448 47144.34764 41557.5521 38054.70677 42298.07382 42313.41003 39267.3046 44777.14267 0.995415829 1.063170554 1.126804246 1.05286637 0.928097454 0.849869029 0.944635394 0.944977895 0.876949762 1 15.45047485 -6.256978298 4.970578292 0.917933431 1.06582886 0.653923943 0.048192799 0.108576268 8.324398543 0.014792229 0.018148655 5.53E-07 6.256978298 0.147895429 MESEGGADDS(ph)AEEGDLLDDDDNEDRGDDQVK ddPTM_A459_MK2206_30min_R2 2 MESEGGADDSAEEGDLLDDDDNEDRGDDQVK 31 1 B4DY08 B4DY08 HNRNPC 1 MES(0.003)EGGADDS(0.997)AEEGDLLDDDDNEDRGDDQVK;MES(0.001)EGGADDS(0.999)AEEGDLLDDDDNEDRGDDQVK 99.061 1.81E-08 25801000 76076 82104 81650 75384 95748 65250 82168 58891 56916 74670 TRUE FALSE 81900.43705 78026.83475 84372.17025 69224.88606 91988.45242 67733.13447 71379.2429 66588.2559 61866.4508 72233.52402 1.133828623 1.080202521 1.168047266 0.958348454 1.273486981 0.937696664 0.988173343 0.921846979 0.856478368 1 16.14038094 -6.813773629 24.98911885 0.93891242 1.113796695 0.549932595 0.082088086 76.02947479 36302.75762 0.02736994 0.024138044 1.54E-07 6.813773629 0.174884275 MESHS(ph)EDEDLAGAVGGLGWNSR ddPTM_A459_MK2206_30min_R1 1 MESHSEDEDLAGAVGGLGWNSR 22 0 Q96MH2;K7ESM2;K7ELS4;K7EJA3;K7ERG7;K7EIM4 Q96MH2 HEXIM2 Protein HEXIM2 1 MES(0.456)HS(0.544)EDEDLAGAVGGLGWNSR 76.678 0.0011013 4844400 1485.1 1510.3 1808.9 1464.3 1831 1709.5 1570.1 1541.5 1741.7 1674.5 TRUE FALSE 1358.784446 1411.979195 1686.116908 1577.08064 1758.067393 1806.290413 1465.361494 1528.022828 1922.755948 1881.949702 0.722008907 0.750274672 0.895941537 0.838003608 0.934173422 0.95979739 0.778640095 0.811936061 1.021682963 1 10.87801235 -5.216927655 3.466024615 0.895393597 0.72587328 0.44342318 0.075244527 0.23246706 5.711185061 0.019942974 0.059655742 6.07E-06 5.216927655 -0.169520317 MESMNRPYTSLVPPLS(ph)PQPK ddPTM_A459_MK2206_30min_R1 1 MESMNRPYTSLVPPLSPQPK 20 1 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 MESMNRPY(0.001)T(0.001)SLVPPLS(0.998)PQPK 87.668 0.0011506 26078000 4120.1 3716.8 3957.9 2975.7 3169.3 2838.3 2664.7 2946.4 3004.9 2264.2 TRUE FALSE 3769.663859 3474.835644 3689.248775 3204.88893 3043.06007 2999.002093 2486.942725 2920.639935 3317.270108 2544.70619 1.481374893 1.36551546 1.449773962 1.259433778 1.195839458 1.178525877 0.977300537 1.14773169 1.30359651 1 11.31328338 -6.064438479 1.384084527 1.12198666 1.439011997 0.684638086 0.091093937 0.255548464 0.990099531 0.033510965 0.056646044 8.62E-07 6.064438479 0.317025336 MESMNRPYTSLVPPLS(ph)PQPK ddPTM_A459_MK2206_30min_R2 2 MESMNRPYTSLVPPLSPQPK 20 1 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 MESMNRPY(0.011)T(0.014)S(0.005)LVPPLS(0.969)PQPK;MESMNRPY(0.007)T(0.008)S(0.008)LVPPLS(0.977)PQPK 72.654 0.0045836 26669000 79628 79626 87455 86527 71449 57262 86547 52987 65798 63259 TRUE FALSE 85724.3809 75671.88863 90370.70605 79457.46731 68643.55326 59441.14554 75183.27494 59912.58283 71520.9911 61194.86401 1.400842739 1.236572543 1.476769456 1.298433596 1.121720824 0.971342064 1.228587989 0.979045935 1.168741728 1 15.90112295 -6.239979169 3.392684747 1.075882966 1.360852391 0.674189491 0.0947597 0.141005059 3.42018645 0.027974858 0.035269808 5.75E-07 6.239979169 0.284969425 MESS(ph)FGSPSKQESSESLPK ddPTM_A459_MK2206_30min_R1 1 MESSFGSPSKQESSESLPK 19 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 MES(0.073)S(0.288)FGS(0.288)PS(0.147)KQES(0.083)S(0.083)ES(0.038)LPK 75.225 0.0051778 18840000 3179 3314.4 3602.2 2876.1 2476.5 1872.1 2394.7 2754.4 2939.3 2358.7 TRUE FALSE 2908.609356 3098.631958 3357.6927 3097.61772 2377.855761 1978.096684 2234.953932 2730.318571 3244.850753 2650.913563 1.097210183 1.168892113 1.266617194 1.168509514 0.89699483 0.746194335 0.843088195 1.029953828 1.224050002 1 11.37227391 -6.251745888 22.07970401 0.942004009 1.181371276 0.421406675 0.124688154 142.91183 325519.7921 0.040898291 0.051951227 5.60E-07 6.251745888 0.239367268 MESSFGS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 MESSFGSPSK 10 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 MES(0.002)S(0.005)FGS(0.95)PS(0.043)K 114.76 0.0068572 11178000 67947 70128 66918 61904 65177 52895 71171 52384 60263 70460 TRUE FALSE 73149.07456 66645.5455 69149.01272 56846.24518 62617.82349 54907.95629 61826.16221 59230.76866 65504.56681 68160.89597 1.073182409 0.977768038 1.014496827 0.83400085 0.918676649 0.805563887 0.907062053 0.868984596 0.961028547 1 16.05665668 -5.743309146 24.74790829 0.891093214 1.017411081 0.480234449 0.057897834 170.9799152 233386.7108 0.014829923 0.025619141 1.81E-06 5.743309146 0.126317868 MESSFGS(ph)PSKQESSESLPK ddPTM_A459_MK2206_30min_R1 2 MESSFGSPSKQESSESLPK 19 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 MES(0.018)S(0.191)FGS(0.587)PS(0.129)KQES(0.01)S(0.052)ES(0.014)LPK;MES(0.007)S(0.041)FGS(0.494)PS(0.449)KQES(0.004)S(0.005)ES(0.001)LPK 71.685 0.0076864 36728000 4092.1 3866.6 4725.9 3909 2881.6 2971.1 3899.3 3202 3588.7 3164 TRUE FALSE 3744.045407 3614.883637 4405.119075 4210.071857 2766.81977 3139.321114 3639.184812 3174.005252 3961.758207 3555.980207 1.052887021 1.016564611 1.238791787 1.183941308 0.778075132 0.882828624 1.023398501 0.892582373 1.114111434 1 11.79603158 -6.238182551 24.9962555 0.943589865 1.123707906 0.408450815 0.102803512 826.3268557 888129.7054 0.031402032 0.040513047 5.78E-07 6.238182551 0.180118041 MESSFGS(ph)PSKQESSESLPK ddPTM_A459_MK2206_30min_R2 1 MESSFGSPSKQESSESLPK 19 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 MES(0.01)S(0.04)FGS(0.743)PS(0.151)KQES(0.021)S(0.027)ES(0.008)LPK 58.712 0.024994 46511000 60370 68310 70255 68239 74936 54259 69111 62161 57208 74823 TRUE FALSE 64991.97362 64917.82473 72597.26664 62663.65541 71993.63612 56323.86427 60036.64268 70285.65613 62183.84843 72381.53164 0.897908239 0.896883822 1.002980525 0.865740942 0.99464096 0.778152424 0.829446978 0.971044057 0.859112083 1 16.14333402 -3.295028811 15.20778374 0.906295033 0.318448094 0 0.075154554 0 0 0.016766266 0 0.000506957 3.295028811 -0.587846939 MESTAGITTTT(ph)SPR ddPTM_A459_MK2206_30min_R2 1 MESTAGITTTTSPR 14 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 MESTAGIT(0.011)T(0.065)T(0.089)T(0.791)S(0.044)PR 104.17 0.014898 3593900 30690 22649 23388 20581 20328 20116 25112 18286 14472 26222 TRUE FALSE 33039.65 21524.28359 24167.74425 18899.46646 19529.82058 20881.52848 21814.76424 20676.04299 15730.7484 25366.37829 1.302497724 0.848535938 0.952747135 0.745059711 0.769909695 0.823197078 0.859987342 0.815096375 0.620141678 1 14.63062993 -2.405155284 1.230394889 0.806799143 200 0.662818203 0.101324859 339.4616832 1.700484662 0.028331656 189527.8789 0.003934094 2.405155284 199.1932009 MET(ph)EADAPSPAPS(ph)LGER ddPTM_A459_MK2206_30min_R2 1 METEADAPSPAPSLGER 17 0 Q12873-2;Q12873;Q12873-3 Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 2 MET(0.5)EADAPS(0.5)PAPS(1)LGER 160.09 0.00070169 0 21458 23696 19038 25949 22112 21701 21787 16561 18803 19354 TRUE FALSE 23100.84098 22519.2911 19672.71742 23828.88369 21243.77178 22526.84676 18926.34073 18725.57956 20438.45095 18722.48057 1.233855786 1.202794203 1.05075379 1.272741804 1.134666515 1.203197764 1.010888523 1.000165523 1.09165294 1 14.19248397 -7.263387936 24.97371834 1.025690533 1.179772089 0.614610006 0.060999262 118.3250398 1516497.532 0.023998689 0.01712183 5.45E-08 7.263387936 0.154081556 MET(ph)EADAPSPAPSLGER ddPTM_A459_MK2206_30min_R2 1 METEADAPSPAPSLGER 17 0 Q12873-2;Q12873;Q12873-3 Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 MET(0.985)EADAPS(0.015)PAPSLGER 204.23 2.02E-07 16389000 44619 60281 45661 61942 52802 62357 62703 47234 51605 44369 TRUE FALSE 48035.06495 57287.5332 47183.31495 56881.14046 50728.72817 64730.03933 54470.02078 53407.64598 56093.50962 42921.24316 1.119144307 1.334712813 1.099299822 1.325244477 1.181902583 1.508111941 1.269069038 1.244317313 1.306893871 1 15.38940424 -4.742389478 24.55069295 1.263643766 1.119143708 0.078075031 0.131940237 2552.435373 3289251.382 0.030970098 1.074073987 1.81E-05 4.742389478 -0.144500059 METEADAPS(ph)PAPS(ph)LGER ddPTM_A459_MK2206_30min_R2 1 METEADAPSPAPSLGER 17 0 Q12873-2;Q12873;Q12873-3 Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 2 MET(0.028)EADAPS(0.972)PAPS(1)LGER 180.03 1.44E-06 5474300 37073 35187 42419 38531 36852 37891 31182 25641 25978 29625 TRUE FALSE 39911.33738 33439.66475 43833.22829 35382.89405 35405.00531 39332.96856 27087.76594 28992.36674 28237.51948 28658.33868 1.392660539 1.166838913 1.529510443 1.23464568 1.235417228 1.372479019 0.945196658 1.011655528 0.985315995 1 14.80666736 -7.262993858 24.99966804 0.986513326 1.316412175 0.74577914 0.096181504 70.7158621 1137261.12 0.037517859 0.02681568 5.46E-08 7.262993858 0.329898849 METEADAPS(ph)PAPSLGER ddPTM_A459_MK2206_30min_R1 7 METEADAPSPAPSLGER 17 0 Q12873-2;Q12873;Q12873-3 Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 MET(0.001)EADAPS(0.996)PAPS(0.004)LGER;METEADAPS(1)PAPSLGER;METEADAPS(1)PAPSLGER;MET(0.002)EADAPS(0.998)PAPSLGER;MET(0.321)EADAPS(0.651)PAPS(0.028)LGER;MET(0.002)EADAPS(0.996)PAPS(0.002)LGER;METEADAPS(1)PAPSLGER 257.46 4.73E-40 172746600 21859.9 20754.9 20391 17909.2 23579.7 20089.5 23764.6 21622.2 18389.8 18002.2 TRUE FALSE 20000.60071 19403.75224 19006.91573 19288.56969 22640.47062 21226.95013 22179.30689 21433.15939 20301.48552 20232.44845 0.988540797 0.95904123 0.939427365 0.953348268 1.119017833 1.049153798 1.09622456 1.059345805 1.003412196 1 14.3043833 -6.240186523 24.74979817 1.059309337 0.958538669 0.621136396 0.036007815 444.3713371 517488.0756 0.010474767 0.0135087 5.75E-07 6.240186523 -0.100770667 METEADAPS(ph)PAPSLGER ddPTM_A459_MK2206_30min_R2 9 METEADAPSPAPSLGER 17 0 Q12873-2;Q12873;Q12873-3 Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 METEADAPS(1)PAPSLGER;METEADAPS(1)PAPSLGER;METEADAPS(0.949)PAPS(0.051)LGER;METEADAPS(1)PAPSLGER;MET(0.008)EADAPS(0.992)PAPSLGER;MET(0.005)EADAPS(0.995)PAPS(0.001)LGER;METEADAPS(0.994)PAPS(0.006)LGER;MET(0.021)EADAPS(0.974)PAPS(0.005)LGER;MET(0.01)EADAPS(0.99)PAPSLGER 246.12 3.93E-24 210965600 380334 445351 380348 464048 409207 466017 439307 354003 382337 389812 TRUE FALSE 409452.6635 423235.5169 393028.6125 426133.794 393139.4771 483751.6035 381625.4632 400272.4076 415591.9812 377092.4664 1.085815019 1.122365347 1.042260579 1.1300512 1.042554578 1.28284611 1.012020916 1.061470178 1.102095688 1 18.5245588 -9.008694256 0.714926195 0.999790179 1.104559438 0.148881489 0.071160225 3.193677753 2.748662929 0.077733731 0.025665194 9.80E-10 9.008694256 0.104769259 METFS(ph)PAVGNR ddPTM_A459_MK2206_30min_R1 1 METFSPAVGNR 11 0 Q7Z4H7;Q5VY60;Q7Z4H7-3 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 MET(0.071)FS(0.929)PAVGNR 94.402 0.02225 5191100 3698.5 3532 3478 3088 3093.8 2796.9 3726.3 2983.6 3186 3405.5 TRUE FALSE 3383.923153 3302.066158 3241.92305 3325.838295 2970.567395 2955.258061 3477.725326 2957.5147 3517.196101 3827.39905 0.884131262 0.862744155 0.847030322 0.868955197 0.776132135 0.772132203 0.908639335 0.772721804 0.918952023 1 11.90214861 -8.521937507 5.900171476 0.99994892 0.837343165 0.56406121 0.046047089 0.090238147 17.10124527 0.044312693 0.011488835 3.01E-09 8.521937507 -0.162605755 METVSNASSSSNPS(ph)SPGR ddPTM_A459_MK2206_30min_R1 1 METVSNASSSSNPSSPGR 18 0 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 METVSNASSSSNPS(0.5)S(0.5)PGR 319.45 5.76E-127 69148000 5067 4411.3 4799.3 4858.6 4936.9 5047.1 4851.7 5078.4 4723.8 4122.8 TRUE FALSE 4636.025042 4124.123568 4473.536888 5232.810214 4740.252819 5332.86244 4528.051945 5034.000084 5214.855914 4633.56359 1.000531222 0.89005438 0.965463579 1.129327377 1.023025308 1.150920309 0.977228834 1.086420848 1.125452541 1 12.17790646 -5.636532522 6.310807972 1.071118045 0.941343462 0.455288372 0.059457016 0.167328984 8.567714297 0.015268964 0.026665531 2.31E-06 5.636532522 -0.129774583 METVSNASSSSNPS(ph)SPGR ddPTM_A459_MK2206_30min_R2 5 METVSNASSSSNPSSPGR 18 0 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 METVSNASSSSNPS(0.5)S(0.5)PGR;METVSNASSSSNPS(0.5)S(0.5)PGR;METVSNASSSSNPS(0.5)S(0.5)PGR;METVS(0.003)NAS(0.083)S(0.083)S(0.005)S(0.005)NPS(0.411)S(0.411)PGR;METVSNASSSSNPS(0.5)S(0.5)PGR 287.48 1.34E-80 66540300 135418 171380 135990 166513 158687 180742 217704 161008 159304 178441 TRUE FALSE 145785.7062 162869.5184 140523.8387 152908.3553 152456.151 187620.2635 189119.2033 182052.2984 173159.974 172618.4848 0.844554431 0.943523045 0.814071789 0.885816808 0.883197134 1.086907139 1.095590681 1.054651237 1.003136913 1 17.39722744 -6.75339998 24.72529457 1.054443742 0.875383357 0.808290395 0.042268146 63.76497379 196109.8491 0.013953996 0.013714784 1.76E-07 6.75339998 -0.179060384 METVSNASSSSNPSS(ph)PGR ddPTM_A459_MK2206_30min_R1 11 METVSNASSSSNPSSPGR 18 0 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 METVSNASSSSNPS(0.033)S(0.967)PGR;METVSNASSSSNPS(0.047)S(0.952)PGR;METVSNASSSSNPS(0.04)S(0.96)PGR;METVSNASSSSNPS(0.033)S(0.967)PGR;METVSNAS(0.042)S(0.024)S(0.014)S(0.009)NPS(0.225)S(0.685)PGR;METVSNASSSSNPS(0.059)S(0.94)PGR;METVSNASSSSNPS(0.016)S(0.984)PGR;METVSNAS(0.001)S(0.001)S(0.001)S(0.001)NPS(0.043)S(0.955)PGR;METVSNASSSSNPS(0.027)S(0.973)PGR;METVSNASSSSNPS(0.028)S(0.972)PGR;METVSNASSSSNPS(0.02)S(0.98)PGR 424.46 0 195609100 33050.82 31090.12 30198.09 26913.6 34680.19 33622.3 34209.67 29362.76 28128.39 24074.77 TRUE FALSE 30239.6742 29066.14754 28148.32779 28986.49014 33298.8046 35525.96557 31927.60533 29106.04449 31052.4368 27057.33426 1.117614688 1.074242838 1.040321545 1.071298815 1.23067573 1.312988383 1.179998185 1.075717371 1.14765322 1 14.72373209 -3.660389946 10.76407708 1.131577089 1.131553847 0 0.09011642 0 0 0.022484943 0 0.00021858 3.660389946 -2.32E-05 METVSNASSSSNPSS(ph)PGR ddPTM_A459_MK2206_30min_R2 8 METVSNASSSSNPSSPGR 18 0 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 METVSNASSSSNPS(0.23)S(0.77)PGR;METVSNASSSSNPS(0.235)S(0.764)PGR;METVSNASSS(0.001)S(0.007)NPS(0.057)S(0.934)PGR;METVSNASSSSNPS(0.082)S(0.918)PGR;METVSNASSSSNPS(0.057)S(0.943)PGR;METVSNASSSSNPS(0.07)S(0.93)PGR;METVSNASSSSNPS(0.458)S(0.542)PGR;METVSNASSSSNPS(0.007)S(0.993)PGR 340.48 4.29E-163 284344300 246704.6 316228.4 244937 310046 293366.9 318074 381954 283001.1 289433 307693 TRUE FALSE 265592.4939 300524.9575 253103.0773 284714.25 281847.8415 330178.529 331802.981 319990.3155 314607.3592 297653.0026 0.892288979 1.009648668 0.850329327 0.956530751 0.946900717 1.109273302 1.114730838 1.075044809 1.05696014 1 18.18327192 -6.709693168 6.474393851 1.078524527 0.931313797 0.671243002 0.048912301 0.113696739 10.4466284 0.015766339 0.015598546 1.95E-07 6.709693168 -0.14721073 MEVDRS(ph)PGLPMSDLK ddPTM_A459_MK2206_30min_R1 2 MEVDRSPGLPMSDLK 15 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;H0Y2S9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 MEVDRS(0.973)PGLPMS(0.027)DLK;MEVDRS(1)PGLPMSDLK 113.38 0.013181 22057000 5768.3 5875.4 5874.8 4980.5 5776.2 5016.6 5361.3 5191.7 4149.3 3250.3 TRUE FALSE 5277.675794 5492.910392 5476.034944 5364.098973 5546.121723 5300.635557 5003.657459 5146.309514 4580.634583 3652.971703 1.444762299 1.503682711 1.499063062 1.46842062 1.518249298 1.451047527 1.369749855 1.408800816 1.253947459 1 11.83485486 -8.682913851 0.67112442 0.993482118 1.489970179 0.957336124 0.031016181 0.170919391 0.16676638 0.031482606 0.012197903 2.08E-09 8.682913851 0.496488061 MEVDRS(ph)PGLPMSDLK ddPTM_A459_MK2206_30min_R2 4 MEVDRSPGLPMSDLK 15 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;H0Y2S9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 MEVDRS(0.999)PGLPMS(0.001)DLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK 127.49 0.0005783 132261000 201302 256345 225440 242083 246831 189531 254144 180297 186611 233442 TRUE FALSE 216713.8359 243615.2801 232956.0571 222304.0445 237139.1747 196743.735 220774.5875 203862.437 202842.0875 225824.8067 0.959654695 1.078779978 1.031578685 0.984409321 1.050102414 0.871222865 0.977636562 0.902745982 0.898227659 1 17.78484445 -6.750891394 24.99992418 0.926867605 1.022685745 0.485524053 0.046732865 168.864836 400228.3203 0.014730763 0.014583882 1.77E-07 6.750891394 0.095818139 MEVEELS(ph)PLALGR ddPTM_A459_MK2206_30min_R1 4 MEVEELSPLALGR 13 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 MEVEELS(1)PLALGR;MEVEELS(1)PLALGR;MEVEELS(1)PLALGR;MEVEELS(1)PLALGR 209.25 8.67E-06 20166200 6278.3 6392.1 5540.5 4576.83 5490.81 4747.34 4969.4 4833.48 4715.99 5680.29 TRUE FALSE 5744.297616 5975.973128 5164.426297 4929.33824 5272.099411 5016.130288 4637.900393 4791.221394 5206.234037 6384.007209 0.899794976 0.936084959 0.808963105 0.772138577 0.825829176 0.785733807 0.726487336 0.750503757 0.815511929 1 12.64024657 -5.304566112 6.046790518 0.796531494 0.918014905 0.248070493 0.071502341 0.205841123 20.33677798 0.0176764 0.03841647 4.96E-06 5.304566112 0.121483411 MEVEELS(ph)PLALGR ddPTM_A459_MK2206_30min_R2 1 MEVEELSPLALGR 13 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 MEVEELS(1)PLALGR 88.224 0.024082 1497000 15329 13818 11675 16933 15042 9864.9 16304 11068 14405 15973 TRUE FALSE 16502.60003 13131.81821 12064.23867 15549.51973 14451.3755 10240.31568 14163.26522 12514.6256 15657.92086 15451.80232 1.068004864 0.849856731 0.780765792 1.006324014 0.935255008 0.662726294 0.916609268 0.809913649 1.01333945 1 13.91548751 -8.27887102 23.52775714 1.006669832 0.874663467 0.180040485 0.108984958 742.9530569 1002755.789 0.103131328 0.026950715 5.26E-09 8.27887102 -0.132006365 MEVGPFST(ph)GQESPTAENAR ddPTM_A459_MK2206_30min_R1 2 MEVGPFSTGQESPTAENAR 19 0 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 MEVGPFS(0.203)T(0.662)GQES(0.113)PT(0.023)AENAR;MEVGPFS(0.059)T(0.85)GQES(0.086)PT(0.006)AENAR 142.55 0.00020602 16049100 2515.4 2219.8 2651.41 1634.45 2096.23 2221.74 3496.64 2238.31 3699.91 4856.89 TRUE FALSE 2301.452021 2075.290617 2471.439676 1760.335622 2012.73272 2347.532999 3263.385526 2218.740692 4084.528885 5458.598201 0.421619606 0.380187466 0.452760871 0.322488587 0.368727033 0.430061513 0.597843147 0.40646712 0.748274325 1 12.41431479 -8.594744653 0.799671103 1.007204399 0.393729136 0.869577045 0.072649252 0.243879332 0.343356855 0.068925147 0.025093954 2.54E-09 8.594744653 -0.613475263 down MEVGPFSTGQES(ph)PTAENAR ddPTM_A459_MK2206_30min_R1 1 MEVGPFSTGQESPTAENAR 19 0 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 MEVGPFSTGQES(0.994)PT(0.006)AENAR 235.54 1.24E-24 12947000 1671.9 1652.6 1774.8 1053 1770.2 1400.3 2609.8 1595.5 2260.8 3311.9 TRUE FALSE 1529.696126 1545.01544 1654.331521 1134.102242 1699.689186 1479.583776 2435.705004 1581.550712 2495.81825 3722.203176 0.410965241 0.415080899 0.444449549 0.304685744 0.456635252 0.397502153 0.654371857 0.424896395 0.670521767 1 11.86194109 -9.04708111 0.466806447 1.042419638 0.389916487 0.838015025 0.077845002 0.776354611 0.306779911 0.141114514 0.043407233 8.97E-10 9.04708111 -0.65250315 down MEVGPFSTGQES(ph)PTAENAR ddPTM_A459_MK2206_30min_R2 2 MEVGPFSTGQESPTAENAR 19 0 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 MEVGPFS(0.001)T(0.019)GQES(0.954)PT(0.027)AENAR;MEVGPFST(0.009)GQES(0.983)PT(0.008)AENAR 183.71 1.75E-13 12465000 61814 46573 54713 49266 36723 44524 54186 34498.6 38050 66879 TRUE FALSE 66546.52737 44260.25254 56537.10411 45240.81021 35281.0705 46218.39202 47071.31311 39007.68547 41359.52022 64696.74371 1.028591604 0.684118705 0.873878666 0.699274919 0.545329927 0.714385135 0.727568505 0.602931202 0.639282873 1 15.98140548 -1.989970877 1.105597178 0.695254374 200 0.316473544 0.128053341 1134.366508 2.903311238 0.037122248 571445.5752 0.010233616 1.989970877 199.3047456 MEVGPFSTGQESPT(ph)AENAR ddPTM_A459_MK2206_30min_R2 4 MEVGPFSTGQESPTAENAR 19 0 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 MEVGPFST(0.001)GQES(0.024)PT(0.974)AENAR;MEVGPFS(0.205)T(0.024)GQES(0.038)PT(0.733)AENAR;MEVGPFS(0.087)T(0.186)GQES(0.186)PT(0.541)AENAR;MEVGPFST(0.001)GQES(0.157)PT(0.842)AENAR 194.27 7.64E-15 15060900 86217 62732.6 69318.9 67155.7 58276.3 59694.8 68085.8 55449.1 53113.5 82055.6 TRUE FALSE 92817.83981 59617.39031 71629.95753 61668.86449 55988.07965 61966.52744 59146.05267 62696.48776 57733.21622 79378.13249 1.169312465 0.751055592 0.902389049 0.776899916 0.705333798 0.780649853 0.745117715 0.78984584 0.727318903 1 16.276454 -4.757995181 24.97150374 0.788627116 1.169313006 0.632487607 0.084749106 57.73704892 418544.8321 0.019788219 0.140567648 1.75E-05 4.757995181 0.38068589 MEVS(ph)ATELMNILNK ddPTM_A459_MK2206_30min_R1 1 MEVSATELMNILNK 14 0 U3KPR7 U3KPR7 CAPNS1 1 MEVS(0.5)AT(0.5)ELMNILNK 94.532 0.02457 4405200 1923.3 1402.5 1320.5 1097.8 1970.8 1827.6 2303.8 1476.7 1564.4 1421.6 TRUE FALSE 1759.713235 1311.196995 1230.868139 1182.352746 1892.298863 1931.077133 2150.117706 1463.789368 1727.024978 1597.718541 1.101391259 0.820668323 0.770391097 0.740025678 1.184375605 1.208646632 1.345742477 0.916174739 1.080931925 1 10.64179757 -6.268740552 24.87579161 1.133908907 0.849177747 0.450288598 0.142722941 487.0530354 1659433.198 0.045997814 0.053217083 5.39E-07 6.268740552 -0.28473116 MFGGPGTASRPSS(ph)SR ddPTM_A459_MK2206_30min_R1 1 MFGGPGTASRPSSSR 15 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 MFGGPGT(0.028)AS(0.331)RPS(0.042)S(0.46)S(0.139)R 141.06 0.001837 30764000 4121.2 4331.5 4262.1 3234.9 3977 4316.1 3874.6 3365.9 3804 2595.1 TRUE FALSE 3770.670299 4049.518563 3972.800527 3484.052559 3818.587669 4560.473852 3616.132504 3336.472291 4199.439413 2916.60058 1.292830539 1.388437824 1.362133901 1.194559372 1.309259723 1.563626464 1.239844951 1.143959277 1.439840423 1 11.51007211 -12.81970635 0.369162703 9.62E-08 1.333720119 0.409068945 0.116462843 135.8705662 3.514173358 105.4153328 0.084330285 1.51E-13 12.81970635 1.333720023 MFGGPGTASRPSS(ph)SR ddPTM_A459_MK2206_30min_R2 1 MFGGPGTASRPSSSR 15 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 MFGGPGTASRPS(0.011)S(0.95)S(0.038)R 120.54 0.0084468 15481000 32195 45864 29067 38131 37647 43450 46936 47044 35101 33529 TRUE FALSE 34659.87395 43586.46045 30036.07927 35015.57532 36168.78962 45103.5202 40773.24682 53192.81233 38154.02153 32434.95148 1.068596448 1.343811489 0.926040518 1.079563056 1.115117735 1.390583865 1.257077472 1.639984335 1.176324298 1 14.98526166 -6.750198721 23.98725199 1.330560722 1.108266724 0.194647046 0.181366236 180.6704046 385544.2348 0.057822332 0.057270919 1.78E-07 6.750198721 -0.222293998 MFGGPGTASRPSSS(ph)R ddPTM_A459_MK2206_30min_R2 1 MFGGPGTASRPSSSR 15 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 MFGGPGTASRPS(0.009)S(0.041)S(0.949)R 125.39 0.0058566 15299000 39723 62435 51513 49064 54582 55334 63919 62214 53403 45656 TRUE FALSE 42764.22342 59334.56869 53230.41771 45055.31425 52438.83643 57439.77414 55526.35852 70345.58341 58047.89641 44166.24846 0.968255736 1.343436918 1.205228417 1.020129982 1.187305652 1.300535503 1.257212475 1.592745272 1.314304439 1 15.43065667 -6.791397764 2.812741236 1.334588 1.149024159 0.149726965 0.165962654 0.431751759 6.996968917 0.0611722 0.055796556 1.62E-07 6.791397764 -0.185563841 MFIFSEEKR ddPTM_A459_MK2206_30min_R1 1 MFIFSEEKR 9 1 E9PLT2 E9PLT2 UBTF 0 95.815 0.029819 32033000 3223.7 3139.3 3537.1 3116 4272.2 3303.8 3569.5 3388.7 2631.6 1788.3 FALSE TRUE 2949.507387 2934.930999 3297.011507 3355.99486 4102.029227 3490.858301 3331.385168 3359.072953 2905.164237 2009.848105 1.467527511 1.460275029 1.640428199 1.669775368 2.040964796 1.736876679 1.657530815 1.671306874 1.445464575 1 10.97287076 -8.656024253 1.987790596 1.000452764 1.676793797 0.644238664 0.151438176 0.368635356 2.996424203 0.162350904 0.045148423 2.21E-09 8.656024253 0.676341034 MFPTGFSS(ph)PSPSAAAAAQEVR ddPTM_A459_MK2206_30min_R2 1 MFPTGFSSPSPSAAAAAQEVR 21 0 A0A669KAX4;Q13620-1;A0A669KAU9 A0A669KAX4 CUL4B Cullin-4B 1 MFPTGFS(0.06)S(0.93)PS(0.01)PSAAAAAQEVR 126.14 0.00037318 0 2462.5 2857 3290.2 5200.3 3116.4 4962 3937 3543.7 3372.8 3356.3 TRUE FALSE 2651.030893 2715.125534 3399.893626 4775.418855 2994.034477 5150.832387 3420.067171 4006.873757 3666.160047 3246.784206 0.816509729 0.836250691 1.047157252 1.470814983 0.922153826 1.586441248 1.053370644 1.23410535 1.129166528 1 11.66479579 -5.423810246 3.811859622 1.210684082 0.82981931 0.367147629 0.192996721 0.221395198 5.749885001 0.048285472 0.107297208 3.77E-06 5.423810246 -0.380864772 MFPTPPSLEQHPAFS(ph)PVMNYK ddPTM_A459_MK2206_30min_R2 2 MFPTPPSLEQHPAFSPVMNYK 21 0 F8VRB8;H0YHC1;A0A3B3IS46;A0A3B3IRX3;Q71F56 F8VRB8 MED13L Mediator of RNA polymerase II transcription subunit 13-like 1 MFPTPPS(0.001)LEQHPAFS(0.999)PVMNYK;MFPTPPSLEQHPAFS(1)PVMNYK 122.47 4.80E-05 9560100 23211.6 28351.4 26474.4 36336 28651.5 28727 33920 23870.9 25951.4 27061.9 TRUE FALSE 24988.69794 26943.5107 27357.04328 33367.23257 27526.49815 29820.22611 29466.26325 26990.90859 28208.60586 26178.87242 0.954536832 1.029208221 1.045004645 1.274586316 1.051477608 1.139095131 1.125574195 1.03101876 1.077533265 1 14.67611534 -5.132173834 2.30834835 1.103151319 0.964345902 0.261636954 0.072952584 0.444826962 4.21204429 0.01967623 0.090901277 7.38E-06 5.132173834 -0.138805416 MFS(ph)PMEEK ddPTM_A459_MK2206_30min_R1 4 MFSPMEEK 8 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 MFS(1)PMEEK;MFS(1)PMEEK;MFS(1)PMEEK;MFS(1)PMEEK 120.99 0.0071153 81030000 18120 22211.3 20815.6 16574.6 16256.2 15039.1 19433.2 17199.3 20729.3 19286.5 TRUE FALSE 16578.79885 20765.34033 19402.69507 17851.17856 15608.68113 15890.60085 18136.84669 17048.92833 22884.18492 21675.85723 0.764850897 0.957993962 0.895129307 0.823551215 0.720095218 0.73310138 0.836730308 0.786539981 1.055745324 1 14.40380143 -8.26192461 24.99997422 1.027872685 0.817352604 0.60175812 0.069325333 32.44826136 1671530.364 0.060842861 0.019322907 5.47E-09 8.26192461 -0.210520082 MFS(ph)PMEEK ddPTM_A459_MK2206_30min_R2 2 MFSPMEEK 8 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 MFS(1)PMEEK;MFS(1)PMEEK 83.883 0.037826 26515000 186197 211876 192867 204770 220410 145835 226785 195303 162353 218879 TRUE FALSE 200452.3855 201354.5459 199297.0895 188039.636 211755.5959 151384.8531 197007.8571 220829.7727 176474.1705 211736.9962 0.946704587 0.950965347 0.941248309 0.888081154 1.000087844 0.714966472 0.93043663 1.042943731 0.833459309 1 17.69191384 -10.80915282 8.577268387 1.000000062 0.918100283 0.077627637 0.086152637 1.00E-07 8.42E-09 0.082166006 0.019928169 1.55E-11 10.80915282 -0.081899779 MFT(ph)DMVAT(ph)ANNRQTFVNSAIR ddPTM_A459_MK2206_30min_R1 1 MFTDMVATANNRQTFVNSAIR 21 1 Q13231-4 Q13231-4 2 MFT(1)DMVAT(1)ANNRQTFVNSAIR 60.938 0.034762 3250700 1052.9 949.07 1012.2 1082.9 1436.3 1243 877.12 982.7 731.28 479.54 TRUE FALSE 963.345326 887.2853705 943.4946842 1166.305146 1379.08913 1313.377586 818.6089252 974.1083575 807.2991729 538.9490355 1.787451619 1.646325185 1.750619487 2.164036057 2.558848868 2.436923529 1.518898581 1.807422026 1.497913754 1 9.074005044 -8.40670253 1.081083987 1.019141565 2.01813514 0.510606582 0.308741913 0.465518443 1.177395415 0.333443665 0.1094586 3.92E-09 8.40670253 0.998993575 MFVLDEADEMLSR ddPTM_A459_MK2206_30min_R1 2 MFVLDEADEMLSR 13 0 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;J3KSZ0;J3QR64;Q14240-2;Q14240;E7EQG2;J3QLN6;J3KTN0 P60842 EIF4A1;EIF4A2 "Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed" 0 ; 298.7 9.89E-73 25412000 3687.9 3689.4 4188.2 3920.8 3896.9 3818.8 4062.1 3597.7 2797.09 3039 FALSE TRUE 3374.224739 3449.219389 3903.916653 4222.780695 3741.678221 4035.017156 3791.124721 3566.245688 3087.857515 3415.494263 0.987916969 1.009874157 1.143001965 1.236360061 1.095501246 1.181386015 1.10997836 1.044137514 0.904073401 1 11.73787865 -8.005890135 3.497235358 0.953516286 1.113238339 0.425550035 0.072340604 0.239740576 6.091336997 0.055544482 0.020982674 9.87E-09 8.005890135 0.159722054 MFVLDEADEMLSR ddPTM_A459_MK2206_30min_R2 2 MFVLDEADEMLSR 13 0 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;J3KSZ0;J3QR64;Q14240-2;Q14240;E7EQG2;J3QLN6;J3KTN0 P60842 EIF4A1;EIF4A2 "Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed" 0 ; 205.56 0.00024062 20132100 11414.4 9716.5 8417.7 13278.1 10936.9 11169.5 14370 8463.2 7771 7534.2 FALSE TRUE 12288.29524 9233.992739 8698.341917 12193.23676 10507.46235 11594.56315 12483.20174 9569.369299 8446.907533 7288.359671 1.686016579 1.266950748 1.193456732 1.672974072 1.441677253 1.590833009 1.712758742 1.312966117 1.158958657 1 12.83137844 -10.11970244 6.421829847 1 1.450040953 0.313084055 0.199291887 1.46E-09 4.61E-10 0.198720697 0.048196849 7.59E-11 10.11970244 0.450040953 MFVSSSGLPPS(ph)PVPSPR ddPTM_A459_MK2206_30min_R1 2 MFVSSSGLPPSPVPSPR 17 0 G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-2;Q7Z309;Q7Z309-5 G1UD79;Q7Z309-2 SPACIA2;FAM122B Protein FAM122B 1 MFVSSSGLPPS(0.997)PVPS(0.003)PR;MFVSSS(0.001)GLPPS(0.924)PVPS(0.075)PR 159.14 0.00011305 13304000 3830.3 3539 4247.1 3172.9 4738.6 3583.2 4175.9 3499.9 3430.3 3175.8 TRUE FALSE 3504.512871 3308.610457 3958.818685 3417.277308 4549.851528 3786.077687 3897.33333 3469.300743 3786.89196 3569.24208 0.981864719 0.92697844 1.109148272 0.957423798 1.274738845 1.060751163 1.091921826 0.971999283 1.060979299 1 11.80140204 -5.257614918 24.83195624 1.069204371 0.954421573 0.213841871 0.085284438 438.8592855 2849449.994 0.021748142 0.053142594 5.53E-06 5.257614918 -0.114782798 MFVSSSGLPPS(ph)PVPSPR ddPTM_A459_MK2206_30min_R2 2 MFVSSSGLPPSPVPSPR 17 0 G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-2;Q7Z309;Q7Z309-5 G1UD79;Q7Z309-2 SPACIA2;FAM122B Protein FAM122B 1 MFVSSSGLPPS(1)PVPSPR;MFVSSSGLPPS(1)PVPSPR 164.82 3.96E-06 18856200 37276 54663 45439 50743 46122 47472 50750 34917 39005 47180 TRUE FALSE 40129.87922 51948.51491 46953.91358 46597.13458 44311.01854 49278.58023 44086.46404 39480.77179 42397.5844 45640.52046 0.879259895 1.138210397 1.028776909 1.020959755 0.970870141 1.07971118 0.965950072 0.865037721 0.92894612 1 15.47802762 -7.518407567 24.20065369 0.921293911 1.023243476 0.241922413 0.070238188 154.5768003 836683.6767 0.030501146 0.018203302 3.03E-08 7.518407567 0.101949565 MGAGLGHGMDR ddPTM_A459_MK2206_30min_R2 2 MGAGLGHGMDR 11 0 A0A087X0X3;P52272-2;P52272;M0R2T0;M0QZM1 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 ; 135.8 0.002063 12895300 76141 96240 93935 106590 109568 99926 107202 87346 89369 102512 FALSE TRUE 81970.4135 91460.86155 97066.74602 97881.25604 105265.8098 103728.754 93126.24863 98762.4221 97142.15408 99167.04184 0.826589278 0.922290913 0.978820626 0.987034142 1.061499948 1.046000284 0.939084669 0.995919816 0.979581041 1 16.5975731 -4.804055883 1.404302957 1.002583337 0.758308104 0.743228242 0.031985184 0.64109119 1.181163791 0.010166752 0.220828967 1.57E-05 4.804055883 -0.244275233 MGANS(ph)LER ddPTM_A459_MK2206_30min_R2 2 MGANSLER 8 0 A0A087X0X3;P52272-2;P52272;M0QZM1;M0R2I7;M0QY96 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 MGANS(1)LER;MGANS(1)LER 102.95 0.015806 46099000 83377 97403 83524 100327 89687 83175 92738 76142 75913 92757 TRUE FALSE 89760.40723 92566.10866 86308.64847 92129.96317 86165.43774 86340.28291 80561.3892 86094.02083 82515.77552 89730.34669 1.00033501 1.031603154 0.961866878 1.02674253 0.960270866 0.962219429 0.897816538 0.95947496 0.919597199 1 16.45330836 -6.513926748 2.50456478 0.941661087 1.004014774 0.421002668 0.031260873 0.254995639 3.212215278 0.010392399 0.011197213 3.06E-07 6.513926748 0.062353687 MGESDDSILR ddPTM_A459_MK2206_30min_R2 1 MGESDDSILR 10 0 Q8WVC2;P63220 Q8WVC2 RPS21 40S ribosomal protein S21 0 134.77 0.028339 14214000 73353 89689 81519 118520 94338 144250 87953 83462 113620 91601 FALSE TRUE 78968.96208 85235.17468 84236.80277 108836.5369 90633.81611 149739.5348 76404.66545 94370.76997 123502.4622 88612.06687 0.891176167 0.961891283 0.950624511 1.228236071 1.022815733 1.689832323 0.862237708 1.064987798 1.393743161 1 16.43521555 -5.752066373 21.83294521 1.184392994 0.937296127 0.207966182 0.21960826 66.72721345 155421.3145 0.058892784 0.099813937 1.77E-06 5.752066373 -0.247096867 MGIISIS(ph)T(ph)IQKM ddPTM_A459_MK2206_30min_R1 2 MGIISISTIQKM 12 1 X6RDV4;Q8WWT9-4 X6RDV4 SLC13A3 2 MGIISIS(1)T(1)IQKM;MGIISIS(1)T(1)IQKM 122.19 0.0058796 133830000 471.81 238.757 384.31 397.21 397.129 607.88 376.3 368.23 493.4 351.92 TRUE FALSE 431.6800819 223.2138759 358.2241079 427.803183 381.310511 642.2976403 351.1977136 365.0106039 544.6906956 395.5185065 1.091428277 0.564357602 0.905707577 1.08162621 0.964077546 1.623938273 0.887942556 0.922866055 1.377156029 1 8.62760139 -5.743439464 2.8068692 1.130234134 0.809534255 0.207523808 0.243383744 0.385317041 6.194526251 0.069984075 0.126147962 1.81E-06 5.743439464 -0.320699879 MGLLS(ph)PSGIGGVSPR ddPTM_A459_MK2206_30min_R2 2 MGLLSPSGIGGVSPR 15 0 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 SAMD4B Protein Smaug homolog 2 1 MGLLS(0.887)PS(0.113)GIGGVSPR;MGLLS(0.641)PS(0.359)GIGGVSPR 165.24 8.77E-05 35357000 70319 86263 62687 65351 49545 55988 62124 42696 48314 41618 TRUE FALSE 75702.67671 81979.30486 64776.95329 60011.61425 47599.61436 58118.66257 53967.04418 48276.5138 52516.26439 40260.00807 1.8803443 2.036246608 1.608965234 1.490601148 1.182305137 1.443582984 1.340462826 1.199118334 1.304427567 1 15.29705984 -1.522878745 0.247874918 1.078134939 7.24282835 0.826146508 0.126888941 19.63028924 0.265986247 0.168871427 50.31166154 0.03 1.522878745 6.164693412 MGLLSPSGIGGVS(ph)PR ddPTM_A459_MK2206_30min_R2 1 MGLLSPSGIGGVSPR 15 0 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 SAMD4B Protein Smaug homolog 2 1 MGLLSPSGIGGVS(1)PR 120.29 0.0018091 2525600 8770.8 11930 10709 8232.2 9099.6 10626 15287 5588.7 7616.1 8404.3 TRUE FALSE 9442.299192 11337.57355 11066.03272 7559.602926 8742.303982 11030.37988 13279.79854 6319.162279 8278.534611 8130.068379 1.161404646 1.394523763 1.361124187 0.929832638 1.075305099 1.356738881 1.633417816 0.777258196 1.018261376 1 12.98905177 -7.78882227 24.99989703 0.923319813 1.263637389 0.400093145 0.191210589 247.2432015 225723.4306 0.110967246 0.053326591 1.63E-08 7.78882227 0.340317577 MGLS(ph)MER ddPTM_A459_MK2206_30min_R2 2 MGLSMER 7 0 A0A087X0X3;P52272-2;P52272;M0QZM1;M0R2I7 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 MGLS(1)MER;MGLS(1)MER 90.601 0.029436 20393500 33488 59172 48803 53324 50135 55995 63088 47523 53620 48582 TRUE FALSE 36051.86703 56233.60452 50430.06766 48967.25862 48166.44799 58125.92896 54804.46982 53734.41927 58283.77068 46996.77332 0.767113665 1.196541817 1.073053831 1.041928098 1.024888404 1.236806803 1.166132608 1.143364012 1.240165368 1 15.52027409 -6.74412102 24.69968035 1.166806436 1.034561134 0.246773644 0.117495277 309.4513095 441342.3636 0.037055873 0.036966927 1.80E-07 6.74412102 -0.132245302 MGMGNNYSGGYGT(ph)PDGLGGYGR ddPTM_A459_MK2206_30min_R1 2 MGMGNNYSGGYGTPDGLGGYGR 22 0 P31942;P31942-4;P31942-3;P31942-2 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 1 MGMGNNYSGGYGT(1)PDGLGGYGR;MGMGNNYS(0.004)GGYGT(0.996)PDGLGGYGR 194.15 1.24E-21 9011500 1488.07 987.91 1086.71 1132.61 1102.26 842.62 1369.54 1058.9 1048.18 844.72 TRUE FALSE 1361.501832 923.5968794 1012.947153 1219.843818 1058.35465 890.3284162 1278.180485 1049.642149 1157.142062 949.3702909 1.434110426 0.972852098 1.066967402 1.284897821 1.114796471 0.937809435 1.34634557 1.105619334 1.218852194 1 9.890827093 -4.742547312 24.78823718 1.125026793 1.434111557 0.358900972 0.126899712 1347.30604 1767694.666 0.031006 1.083383428 1.81E-05 4.742547312 0.309084764 MGMGNNYSGGYGT(ph)PDGLGGYGR ddPTM_A459_MK2206_30min_R2 1 MGMGNNYSGGYGTPDGLGGYGR 22 0 P31942;P31942-4;P31942-3;P31942-2 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 1 MGMGNNY(0.005)S(0.004)GGY(0.005)GT(0.986)PDGLGGYGR 126.29 7.02E-05 4347600 5069.2 4500.8 4167.3 5624 6237.1 4692.8 6731 5258.9 5864.2 5748 TRUE FALSE 5457.30185 4277.296817 4306.235702 5164.50121 5992.200115 4871.387792 5847.211615 5946.256287 6374.257516 5560.443231 0.981450871 0.769236667 0.774441087 0.928793083 1.077647926 0.876079044 1.051572936 1.069385306 1.146357808 1 12.44098417 -6.456087692 0.86766934 1.068245806 0.83378604 0.472982475 0.088691526 0.5267466 0.869732459 0.050817181 0.066607184 3.50E-07 6.456087692 -0.234459766 MGNKQT(ph)IFTEEQLDNYQENPFK ddPTM_A459_MK2206_30min_R1 1 MGNKQTIFTEEQLDNYQENPFK 22 1 O75838-4 O75838-4 1 MGNKQT(0.548)IFT(0.449)EEQLDNY(0.003)QENPFK 44.816 0.031707 6099500 2991.3 3337.6 2838 2429.7 2431.3 2783.9 3176.7 2939.4 2921.6 3550.5 TRUE FALSE 2736.874227 3120.321633 2645.364467 2616.835915 2334.456173 2941.522012 2964.788139 2913.701136 3225.310775 3990.362745 0.685871035 0.781964406 0.662938343 0.65578898 0.585023548 0.737156544 0.742987124 0.730184528 0.808275082 1 11.96230419 -8.763162322 0.794144288 1.001444657 0.684075697 0.784404743 0.049598641 0.473598568 0.600563355 0.052977822 0.018761136 1.73E-09 8.763162322 -0.317368959 MGNLQNS(ph)PVNMNPPPLSK ddPTM_A459_MK2206_30min_R2 1 MGNLQNSPVNMNPPPLSK 18 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 MGNLQNS(1)PVNMNPPPLSK 73.877 0.01701 4242800 24473 26436 24094 31615 24750 28347 33433 25160 22938 25616 TRUE FALSE 26346.6717 25123.22668 24897.28193 29031.95337 23778.19064 29425.76495 29043.20694 28448.49839 24933.10578 24780.15202 1.06321671 1.013844736 1.004726763 1.171580923 0.959565971 1.187473141 1.172035059 1.148035668 1.00617243 1 14.59689742 -6.769147561 24.99980702 1.116326206 1.046053205 0.11657401 0.078175197 334.2438476 1084040.401 0.02687852 0.024151395 1.70E-07 6.769147561 -0.070273001 MGPLGLDHMAS(ph)SIER ddPTM_A459_MK2206_30min_R1 1 MGPLGLDHMASSIER 15 0 A0A087X0X3;P52272-2;P52272;M0QZM1 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 MGPLGLDHMAS(0.575)S(0.425)IER 116.51 0.0014875 3101200 1505.1 1256.5 1872.3 1448.4 1707.9 1402.3 2119.3 1583.7 1603.2 1582.3 TRUE FALSE 1377.083341 1174.701622 1745.213493 1559.956019 1639.870726 1481.697014 1977.925364 1569.853878 1769.858377 1778.32727 0.77437003 0.660565488 0.981379256 0.877204126 0.922142259 0.833197038 1.112239236 0.882769952 0.99523772 1 10.79630514 -4.475479704 0.478298939 0.979302782 0.439998411 0.45968556 0.089865989 5.504658661 0.78282228 0.056739452 1.780607966 3.35E-05 4.475479704 -0.539304372 MGPLGLDHMASSIER ddPTM_A459_MK2206_30min_R1 1 MGPLGLDHMASSIER 15 0 A0A087X0X3;P52272-2;P52272;M0QZM1 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 107.11 0.0060708 4331500 2163.9 2066.2 2031.2 1870.8 2659.2 2340.6 2308.1 2351.7 1984.2 1742.4 FALSE TRUE 1979.848942 1931.690004 1893.327803 2014.88934 2553.278433 2473.122749 2154.13086 2331.139335 2190.464691 1958.261666 1.011023693 0.986430995 0.966841069 1.028917317 1.303849469 1.262917409 1.100021972 1.190412586 1.118576096 1 10.93535784 -6.071764016 7.859963103 1.173870525 0.989459896 0.501690772 0.080522912 0.236020877 23.49712466 0.02369797 0.030754264 8.48E-07 6.071764016 -0.184410629 MGPSGGEGMEPERR ddPTM_A459_MK2206_30min_R1 1 MGPSGGEGMEPERR 14 1 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 0 103.14 0.0096055 15586000 841.61 893.73 726.37 895.65 927.02 1136.6 907.12 821.18 840.45 902.42 FALSE TRUE 770.02665 835.5480146 677.0660282 964.6331182 890.0948304 1200.95331 846.6076799 814.0005098 927.8177851 1014.218603 0.75923144 0.823834243 0.667574058 0.951109668 0.877616352 1.184116823 0.83473886 0.802588818 0.914810459 1 9.986152926 -5.776647175 24.88627179 0.933083523 0.757575344 0.400002814 0.105083194 241.2761136 394827.4499 0.030765815 0.045831553 1.67E-06 5.776647175 -0.175508179 MGPSGGEGMEPERRDS(ph)QDGSSYR ddPTM_A459_MK2206_30min_R1 3 MGPSGGEGMEPERRDSQDGSSYR 23 2 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 1 MGPSGGEGMEPERRDS(0.636)QDGS(0.253)S(0.103)Y(0.008)R;MGPSGGEGMEPERRDS(1)QDGSSYR;MGPSGGEGMEPERRDS(0.905)QDGS(0.065)S(0.029)Y(0.001)R 119.37 1.20E-05 408552000 3908.38 3749.7 4090.9 4194.2 4890.4 4237.2 4370.03 4545.7 3193.38 2224.2 TRUE FALSE 3575.951757 3505.593848 3813.221106 4517.238011 4695.605012 4477.106602 4078.513272 4505.957424 3525.343279 2499.750688 1.430523362 1.402377391 1.525440567 1.807075415 1.878429331 1.79102125 1.631568017 1.80256273 1.410277951 1 11.2875685 -8.571293143 4.31586426 1.000279656 1.660082568 0.626987481 0.156661753 0.180123362 10.67198626 0.171896251 0.044905278 2.68E-09 8.571293143 0.659802912 MGPSGGEGMEPERRDS(ph)QDGSSYR ddPTM_A459_MK2206_30min_R2 3 MGPSGGEGMEPERRDSQDGSSYR 23 2 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 1 MGPSGGEGMEPERRDS(0.894)QDGS(0.038)S(0.038)Y(0.029)R;MGPSGGEGMEPERRDS(0.847)QDGS(0.056)S(0.056)Y(0.04)R;MGPS(0.001)GGEGMEPERRDS(0.89)QDGS(0.054)S(0.031)Y(0.025)R 57.248 0.0063601 258680000 136081 197501 165760 191654 209201 181162 186856 156933 203337 150520 TRUE FALSE 146499.466 187693.3875 171286.3557 175995.2551 200986.7176 188056.2469 162321.5827 177444.6819 221022.8847 145608.5447 1.006118606 1.289027288 1.176348242 1.208687687 1.380322274 1.291519308 1.114780613 1.218641957 1.517925237 1 17.15173549 -4.755684223 24.775252 1.249439315 1.006118164 0.219072158 0.134483235 251.7899165 1083800.441 0.0321454 0.27673865 1.76E-05 4.755684223 -0.243321151 MGQAPSQSLLPPAQDQPRS(ph)PVPSAFSDQSR ddPTM_A459_MK2206_30min_R1 5 MGQAPSQSLLPPAQDQPRSPVPSAFSDQSR 30 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MGQAPSQSLLPPAQDQPRS(0.705)PVPS(0.265)AFS(0.028)DQS(0.001)R;MGQAPS(0.001)QS(0.002)LLPPAQDQPRS(0.953)PVPS(0.031)AFS(0.013)DQSR;MGQAPSQSLLPPAQDQPRS(0.956)PVPS(0.031)AFS(0.013)DQSR;MGQAPS(0.001)QS(0.003)LLPPAQDQPRS(0.844)PVPS(0.113)AFS(0.037)DQS(0.001)R;MGQAPS(0.001)QS(0.003)LLPPAQDQPRS(0.875)PVPS(0.086)AFS(0.029)DQS(0.006)R 84.683 1.42E-06 577418000 7019.96 7081.91 7212.94 6184.6 8404.43 7233.7 6914.36 7627.5 4916.12 3532.66 TRUE FALSE 6422.875539 6620.876372 6723.345729 6660.938964 8069.663756 7643.265843 6453.11566 7560.813572 5427.168267 3970.312591 1.617725404 1.667595742 1.693404631 1.677686281 2.03250086 1.9251043 1.625341963 1.904337102 1.366937273 1 11.95503688 -8.506347069 3.577366835 1.001885364 1.766998846 0.769095141 0.135393973 0.096088467 3.11268683 0.138167433 0.036438965 3.12E-09 8.506347069 0.765113482 MGQAPSQSLLPPAQDQPRS(ph)PVPSAFSDQSR ddPTM_A459_MK2206_30min_R2 6 MGQAPSQSLLPPAQDQPRSPVPSAFSDQSR 30 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MGQAPSQSLLPPAQDQPRS(0.99)PVPS(0.009)AFS(0.002)DQSR;MGQAPS(0.002)QS(0.004)LLPPAQDQPRS(0.93)PVPS(0.043)AFS(0.018)DQS(0.004)R;MGQAPS(0.004)QS(0.004)LLPPAQDQPRS(0.952)PVPS(0.014)AFS(0.014)DQS(0.012)R;MGQAPS(0.035)QS(0.032)LLPPAQDQPRS(0.729)PVPS(0.162)AFS(0.032)DQS(0.009)R;MGQAPSQSLLPPAQDQPRS(0.973)PVPS(0.025)AFS(0.002)DQSR;MGQAPSQSLLPPAQDQPRS(0.881)PVPS(0.101)AFS(0.018)DQSR 100.57 2.36E-08 581425000 199971.8 400828 355121 472923 436263 460255 436190 362625 408073 311503 TRUE FALSE 215281.7948 380923.4644 366960.5569 434283.6781 419133.1226 477770.3265 378917.729 410021.3326 443566.4519 301338.6826 0.714418052 1.264104101 1.217767841 1.441181312 1.390903813 1.585492849 1.257448017 1.360666108 1.471986431 1 18.20102636 -4.489081047 1.565192589 1.369794744 1.28E-15 0.594194126 0.153015043 1.525114483 1.985309163 0.040228985 3.997197382 3.24E-05 4.489081047 -1.369794744 MGQAPSQSLLPPAQDQPRSPVPS(ph)AFSDQSR ddPTM_A459_MK2206_30min_R2 1 MGQAPSQSLLPPAQDQPRSPVPSAFSDQSR 30 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MGQAPSQSLLPPAQDQPRS(0.417)PVPS(0.561)AFS(0.022)DQSR 62.717 0.0024011 93913000 46637 79856 77032 84739 110730 107820 65914 74774 99874 61361 TRUE FALSE 50207.56458 75890.46716 79600.20843 77815.55263 106382.1838 111923.1657 57259.41262 84547.21854 108560.86 59358.7956 0.845831929 1.278504161 1.34100107 1.310935504 1.792189056 1.885536331 0.964632319 1.42434188 1.828892566 1 15.8571742 -4.391948838 1.079566803 1.481100228 9.94E-11 0.264345387 0.302776939 4.933094194 2.687781243 0.095962939 10.22704964 4.06E-05 4.391948838 -1.481100228 MGS(ph)PAPLLPGDLLGGGSDSI ddPTM_A459_MK2206_30min_R1 2 MGSPAPLLPGDLLGGGSDSI 20 0 Q9UPQ9;Q9UPQ9-1;Q9UPQ9-2 Q9UPQ9;Q9UPQ9-2 TNRC6B Trinucleotide repeat-containing gene 6B protein 1 MGS(1)PAPLLPGDLLGGGSDSI;MGS(1)PAPLLPGDLLGGGSDSI 196.45 1.63E-15 6239200 3245.2 2972.7 3377.5 2635.8 2750.7 2310 3106.3 2816.3 2953.6 2831.8 TRUE FALSE 2969.178699 2779.17669 3148.24471 2838.809773 2641.133794 2440.790204 2899.084395 2791.677386 3260.63729 3182.624763 0.932933952 0.873234169 0.989197579 0.891971245 0.829860254 0.766911083 0.910909897 0.877161963 1.024512009 1 11.63600136 -8.25960938 24.90896827 1.012256018 0.882620819 0.456002323 0.056007561 141.0954889 1920594.763 0.046134234 0.015366967 5.50E-09 8.25960938 -0.129635199 MGS(ph)PAPLLPGDLLGGGSDSI ddPTM_A459_MK2206_30min_R2 2 MGSPAPLLPGDLLGGGSDSI 20 0 Q9UPQ9;Q9UPQ9-1;Q9UPQ9-2 Q9UPQ9;Q9UPQ9-2 TNRC6B Trinucleotide repeat-containing gene 6B protein 1 MGS(1)PAPLLPGDLLGGGSDSI;MGS(1)PAPLLPGDLLGGGSDSI 75.877 0.0059043 6282800 39269 40775 41004 40264 40307 37273 41169 36014 38089 42097 TRUE FALSE 42275.46483 38750.17279 42371.05289 36974.3024 38724.34465 38691.45013 35763.46085 40721.15345 41401.91237 40723.37834 1.038112911 0.951546123 1.040460164 0.907937993 0.95091189 0.950104135 0.878204665 0.999945366 1.016662027 1 15.31356963 -1.522896075 0.925645963 0.958976939 44.45105891 0.149979439 0.047766427 1984.097821 3.891185513 0.015945572 182514.3793 0.029998803 1.522896075 43.49208197 MGSDEFDIS(ph)PR ddPTM_A459_MK2206_30min_R1 2 MGSDEFDISPR 11 0 Q8IWI9;Q8IWI9-3 Q8IWI9 MGA MAX gene-associated protein 1 MGSDEFDIS(1)PR;MGSDEFDIS(1)PR 151.13 0.0006014 4465800 6323.1 6536.4 5712 5357.8 6594.4 6338.3 6099 4944.3 5339.4 4300 TRUE FALSE 5785.287141 6110.879172 5324.285355 5770.458684 6331.731084 6697.169069 5692.146838 4901.072506 5894.449737 4832.716463 1.197108745 1.264481212 1.10171689 1.194040397 1.310180544 1.385798054 1.177835878 1.014144435 1.219696993 1 12.23861864 -7.529570938 21.43959509 1.089350084 1.241417921 0.400095671 0.089699382 33.49497186 107294.1325 0.043474811 0.025235773 2.95E-08 7.529570938 0.152067837 MGSDEFDIS(ph)PR ddPTM_A459_MK2206_30min_R2 2 MGSDEFDISPR 11 0 Q8IWI9;Q8IWI9-3 Q8IWI9 MGA MAX gene-associated protein 1 MGSDEFDIS(1)PR;MGSDEFDIS(1)PR 132.56 0.0019874 4040700 45108 52369 40029 56070 48349 53525 53269 44192 45153 49585 TRUE FALSE 48561.50316 49768.43161 41363.54688 51488.90164 46450.57533 55561.93138 46274.71631 49968.04613 49080.32632 47967.04551 1.012393043 1.03755466 0.862332596 1.073422411 0.968385166 1.158335495 0.964718919 1.041716153 1.023209285 1 15.54975596 MGSKS(ph)PGNTSQPPAFFSK ddPTM_A459_MK2206_30min_R1 1 MGSKSPGNTSQPPAFFSK 18 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5;H7C184 C9J0Q5;Q9Y618;H7C184 NCOR2 Nuclear receptor corepressor 2 1 MGS(0.444)KS(0.556)PGNTSQPPAFFSK 88.768 0.0035071 37613000 5757.2 5061.1 5677.3 6919 7786.6 6243.9 4288.7 6769.3 2387.3 1008 TRUE FALSE 5267.519908 4731.62147 5291.940694 7451.902579 7476.443234 6597.424222 4002.608648 6710.116724 2635.468378 1132.87865 4.649677093 4.17663575 4.671233493 6.577847132 6.599509342 5.823593041 3.533130974 5.923067509 2.326346584 1 10.14577762 -5.521194896 24.99590992 4.903033138 4.415850763 0 1.772919791 410.6454784 6095808.444 0.468855044 0.827357645 3.01E-06 5.521194896 -0.487182376 MGSKS(ph)PGNTSQPPAFFSK ddPTM_A459_MK2206_30min_R2 1 MGSKSPGNTSQPPAFFSK 18 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5;H7C184 C9J0Q5;Q9Y618;H7C184 NCOR2 Nuclear receptor corepressor 2 1 MGS(0.112)KS(0.888)PGNTSQPPAFFSK 125.04 0.00046466 13825000 18896 93360 51242 80925 116870 87186 80180 52744 105840 43254 TRUE FALSE 20342.69229 88723.87816 52950.3827 74313.16863 112281.0966 90503.92432 69652.26969 59637.8219 115045.7719 41842.62552 0.486171507 2.120418522 1.26546511 1.77601591 2.683414226 2.162959977 1.664624741 1.425288713 2.749487405 1 15.35268576 -4.75572122 24.99530422 1.891274795 0.486169248 0.368345499 0.543887889 200.5783803 876681.5994 0.132577887 1.145737884 1.76E-05 4.75572122 -1.405105547 MGSS(ph)PLEVPKPR ddPTM_A459_MK2206_30min_R2 2 MGSSPLEVPKPR 12 1 Q8NCE2-2;Q8NCE2 Q8NCE2-2 MTMR14 Myotubularin-related protein 14 1 MGS(0.245)S(0.755)PLEVPKPR;MGS(0.237)S(0.763)PLEVPKPR 104.9 0.0052501 11774200 51862 55369 49834 49868 46413 48960 77339 57565 53142 69130 TRUE FALSE 55832.5946 52619.45597 51495.44069 45793.62488 44590.59241 50823.20711 67184.2964 65088.94315 57764.1951 66874.29376 0.834888736 0.786841296 0.770033413 0.684771716 0.666782255 0.759981216 1.004635602 0.973302886 0.863772787 1 16.02916413 -7.249024505 20.40826795 0.958203022 0.746287286 0.759694657 0.057792311 33.74151141 55466.27951 0.023981644 0.018357947 5.64E-08 7.249024505 -0.211915736 MGVMSS(ph)PTENSFTLDADF ddPTM_A459_MK2206_30min_R1 1 MGVMSSPTENSFTLDADF 18 0 P31350-2;P31350 P31350-2 RRM2 Ribonucleoside-diphosphate reductase subunit M2 1 MGVMS(0.085)S(0.808)PT(0.106)ENSFTLDADF 115.91 0.0010525 4144700 1907.8 1787.6 1720.6 1401.2 1802 1447.2 1719 1841.9 1354.2 1341.9 TRUE FALSE 1745.531592 1671.226915 1603.810466 1509.120667 1730.222524 1529.139213 1604.328646 1825.796462 1494.973936 1508.144703 1.157403257 1.108134327 1.063432748 1.000647129 1.14725233 1.013920753 1.063776336 1.210624192 0.991266908 1 10.55855914 -8.387070475 0.009249557 5.85E-07 2.123744567 0.141834202 0.067855343 3915.698818 27.42595437 3176.369973 3116.69048 4.10E-09 8.387070475 2.123743983 MHSATSLFIVNLAVADIMITLLNTPFTLVR ddPTM_A459_MK2206_30min_R1 1 MHSATSLFIVNLAVADIMITLLNTPFTLVR 30 0 Q9NYM4 Q9NYM4 GPR83 Probable G-protein coupled receptor 83 0 65.741 0.00069669 26421000 709.19 666.17 518.45 572.08 573.68 457.37 455.3 512.2 334.86 423.1 FALSE TRUE 648.8696664 622.8022119 483.2590585 616.1417007 550.8291108 483.2658941 424.9277677 507.7218894 369.6698953 475.5168222 1.364556701 1.309737496 1.016281729 1.295730607 1.158379862 1.016296105 0.893612482 1.067726452 0.777406556 1 8.89335257 -6.709599646 1.026913707 0.921369954 1.26007406 0.618691532 0.111563335 0.360584102 0.816932847 0.06138543 0.058784594 1.95E-07 6.709599646 0.338704106 MIAGQVLDINLAAEPK ddPTM_A459_MK2206_30min_R1 1 MIAGQVLDINLAAEPK 16 0 B4DY08;G3V4W0;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V576;G3V555;G3V575 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 131.96 0.0062009 0 2900.9 2702.6 2579.2 2502.7 3337.9 2620.5 2849.4 2622.3 2537.5 2607.3 FALSE TRUE 2654.163222 2526.660249 2404.13109 2695.458388 3204.944375 2768.870445 2659.321725 2599.373508 2801.282206 2930.312008 0.905761303 0.862249563 0.82043519 0.919853715 1.093721203 0.944906357 0.907521697 0.887063733 0.955967214 1 11.51683857 -5.993802649 23.09784053 0.960027594 0.863989633 0.398051006 0.05607352 72.17841255 269001.5161 0.017054395 0.02519473 1.01E-06 5.993802649 -0.096037961 MIET(ph)Y(ph)NQTSPR ddPTM_A459_MK2206_30min_R2 1 MIETYNQTSPR 11 0 Q3L8U2;P29965 Q3L8U2 TNFSF5;CD40LG "CD40 ligand;CD40 ligand, membrane form;CD40 ligand, soluble form" 2 MIET(0.986)Y(0.994)NQT(0.02)SPR 90.913 0.031472 0 3374.8 4615.1 3532.7 3061.5 3262.9 2381.6 2900.1 1220.4 3786.1 3816.8 TRUE FALSE 3633.177283 4385.920845 3650.478455 2811.365657 3134.782151 2472.233457 2519.313386 1379.91047 4115.408134 3692.258129 0.983998723 1.187869508 0.98868452 0.761421753 0.849014896 0.669572216 0.682323201 0.373730769 1.114604665 1 11.8502877 -5.681608562 3.036305587 0.743710575 1.089011736 0.289696348 0.195479905 0.270206555 4.988930255 0.054040889 0.100465397 2.08E-06 5.681608562 0.345301161 MIKPFFHSLSEK ddPTM_A459_MK2206_30min_R1 1 MIKPFFHSLSEK 12 1 P10599 P10599 TXN Thioredoxin 0 133.05 0.001431 4830800 7405.8 7424.6 7573.1 7123.2 8165.2 6829.5 6600.4 7084.1 6097.9 5705.7 FALSE TRUE 6775.897821 6941.257191 7059.059072 7671.830098 7839.962794 7216.180388 6160.099359 7022.164461 6731.798527 6412.565192 1.056659483 1.082446257 1.100816734 1.196374597 1.222593854 1.125318835 0.96062951 1.095063247 1.04978247 1 12.64668587 -7.12471502 8.349845766 1.034534913 1.135096559 0.446098512 0.056630646 0.32717357 20.76796744 0.023703271 0.018356824 7.50E-08 7.12471502 0.100561647 MITNSLNHDS(ph)PPSTPPR ddPTM_A459_MK2206_30min_R1 3 MITNSLNHDSPPSTPPR 17 0 Q8N9M1-2;Q8N9M1;J3QKZ5;J3QS16;Q8N9M1-3 Q8N9M1-2 C19orf47 Uncharacterized protein C19orf47 1 MITNSLNHDS(0.951)PPS(0.024)T(0.024)PPR;MITNSLNHDS(0.992)PPS(0.004)T(0.004)PPR;MITNSLNHDS(0.963)PPS(0.028)T(0.009)PPR 96.633 0.0039124 17917700 5193.5 4619.4 5093.4 4166.4 6394.9 6157 6101.8 4931 4114.2 3680 TRUE FALSE 4751.765553 4318.67622 4747.674199 4487.29685 6140.177592 6505.604019 5694.760055 4887.888787 4541.885813 4135.906183 1.148905546 1.04419105 1.147916319 1.084960986 1.484602726 1.572957348 1.376907455 1.1818181 1.098159777 1 12.01398775 -6.229174359 24.57046651 1.31375098 1.105002023 0.211090618 0.164487485 788.6415951 600566.149 0.051718002 0.066761784 5.90E-07 6.229174359 -0.208748957 MITNSLNHDS(ph)PPSTPPR ddPTM_A459_MK2206_30min_R2 2 MITNSLNHDSPPSTPPR 17 0 Q8N9M1-2;Q8N9M1;J3QKZ5;J3QS16;Q8N9M1-3 Q8N9M1-2 C19orf47 Uncharacterized protein C19orf47 1 MITNSLNHDS(0.787)PPS(0.16)T(0.053)PPR;MITNSLNHDS(0.999)PPS(0.001)TPPR 131.86 0.00049717 27012000 36182 65443 46981 68028 66350 74898 69947 54992 60139 47122 TRUE FALSE 38952.12174 62193.19578 48547.32309 62469.89479 63744.76562 77748.29587 60762.87488 62179.64322 65369.78151 45584.413 0.854505283 1.364352236 1.064998316 1.370422271 1.398389524 1.705589493 1.332974824 1.364054929 1.434038023 1 15.47625298 -4.760736193 24.58268357 1.354402793 0.854504584 0.377174933 0.184898064 14.67995125 512743.1389 0.046251651 0.268589221 1.73E-05 4.760736193 -0.499898208 MIYAS(ph)SK ddPTM_A459_MK2206_30min_R1 1 MIYASSK 7 0 P60981;P60981-2;F6RFD5;P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;Q9Y281-3;Q9Y281 P60981;P23528;Q9Y281 DSTN;CFL1;CFL2 Destrin;Cofilin-1;Cofilin-2 1 MIYAS(0.803)S(0.197)K 103.55 0.018564 14930000 6352.5 6753.2 5947.8 4572.6 4897.3 4964 5306.7 3896.2 5601.4 5059.7 TRUE FALSE 5812.186517 6313.565453 5544.079908 4924.782444 4702.230171 5245.05739 4952.699726 3862.135934 6183.685575 5686.533835 1.022096533 1.110266049 0.9749489 0.866042934 0.826906215 0.92236458 0.870952301 0.679172242 1.087426146 1 12.47333383 -5.548100752 3.524828222 0.877835905 1.064669874 0.300678078 0.103606939 0.238710637 6.258173136 0.027331367 0.054580117 2.83E-06 5.548100752 0.186833969 MIYAS(ph)SKDAIK ddPTM_A459_MK2206_30min_R1 1 MIYASSKDAIK 11 1 P60981;P60981-2;F6RFD5;P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;Q9Y281-3;Q9Y281 P60981;P23528;Q9Y281 DSTN;CFL1;CFL2 Destrin;Cofilin-1;Cofilin-2 1 MIYAS(0.992)S(0.008)KDAIK 121.28 0.021299 8198800 1866 1838.4 1474.7 1701.6 1469 1571.8 1009.9 1361 1225.3 904.54 TRUE FALSE 1707.286901 1718.719826 1374.601473 1832.657527 1410.486619 1660.793958 942.5314137 1349.10092 1352.67432 1016.601244 1.679406661 1.690652885 1.352154034 1.802729967 1.387453171 1.633672954 0.92713974 1.327069909 1.330584954 1 9.989538186 -7.243147414 24.85287307 1.17345447 1.585054528 0.609550362 0.173819957 538.7506417 731989.022 0.064472246 0.049837599 5.71E-08 7.243147414 0.411600058 MKDTDSEEEIR ddPTM_A459_MK2206_30min_R1 1 MKDTDSEEEIR 11 1 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2;A0A590UJC0;G3V226 P0DP25 CALM2;CALM1 0 117.95 0.015361 68016000 7801.4 8356.9 8505.7 6866.4 7165.4 7461.6 7966.9 7653.1 7709.9 7242.3 FALSE TRUE 7137.849963 7812.864291 7928.356782 7395.251318 6879.986945 7884.069344 7435.442637 7586.189754 8511.371695 8139.530801 0.876936293 0.959866666 0.97405575 0.908559903 0.845255963 0.96861472 0.913497697 0.932018066 1.045683333 1 12.99072992 -8.216427495 7.030812867 1.022686459 0.923311793 0.508327706 0.039535317 0.175952645 23.33358416 0.028145493 0.010278762 6.08E-09 8.216427495 -0.099374666 MKDTDSEEEIREAFR ddPTM_A459_MK2206_30min_R1 1 MKDTDSEEEIREAFR 15 2 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2;A0A590UJC0;G3V226 P0DP25 CALM2;CALM1 0 89.46 0.010512 16195000 4392.3 3994 3917.4 5635.4 5881 3749.8 3341.8 5498.4 1555.5 825.32 FALSE TRUE 4018.71182 3733.989874 3651.497803 6069.439484 5646.747317 3962.110435 3118.874619 5450.328068 1717.199791 927.5668724 4.332530559 4.025574851 3.936641024 6.543398287 6.087698348 4.271509207 3.362425624 5.875940841 1.851294869 1 9.857307486 -8.390026577 4.784187471 1.056144827 4.778177411 0.651536469 0.99468684 0.141217346 4.534790489 1.020320959 0.266564963 4.07E-09 8.390026577 3.722032584 MKEIAEAYLGK ddPTM_A459_MK2206_30min_R1 1 MKEIAEAYLGK 11 1 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PI65;E9PPY6 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 134.99 0.0043246 12979000 6639.7 7082.9 7616.4 7482.5 6878.2 5687.7 6025.4 6868.6 5060.5 3448.8 FALSE TRUE 6074.958649 6621.801923 7099.419989 8058.803446 6604.226729 6009.732659 5623.45656 6808.548554 5586.557084 3876.063381 1.567301164 1.708383293 1.831605753 2.079120658 1.703849003 1.550473268 1.450816462 1.756562751 1.441296629 1 11.92037645 -6.747383129 3.159839263 1.479936163 1.801432861 0.386483079 0.213131862 0.301214464 6.224875556 0.077263583 0.072528413 1.79E-07 6.747383129 0.321496698 MKETIQGTGSWGPEPPGPGIPPAYSS(ph)PR ddPTM_A459_MK2206_30min_R1 1 MKETIQGTGSWGPEPPGPGIPPAYSSPR 28 1 Q9H4L4 Q9H4L4 SENP3 Sentrin-specific protease 3 1 MKETIQGTGSWGPEPPGPGIPPAY(0.003)S(0.253)S(0.744)PR 138.85 8.37E-13 16172000 1218.9 1010.3 1191.5 1162.1 1295.3 962.97 1146.2 1082.5 802.24 729.67 TRUE FALSE 1115.226154 944.5292864 1110.6243 1251.605143 1243.705458 1017.492529 1069.739089 1073.035817 885.6357188 820.0670283 1.359920733 1.151770835 1.354309174 1.526222979 1.516590004 1.240743127 1.304453237 1.308473307 1.079955282 1 9.679598023 -8.301843009 1.555503405 0.991842177 1.356932476 0.575958251 0.106232997 0.299842978 1.419955884 0.110732296 0.033379975 4.99E-09 8.301843009 0.365090299 MKPPAACAGDMADAAS(ph)PCSVVNDLR ddPTM_A459_MK2206_30min_R2 3 MKPPAACAGDMADAASPCSVVNDLR 25 1 P52888 P52888 THOP1 Thimet oligopeptidase 1 MKPPAACAGDMADAAS(0.999)PCS(0.001)VVNDLR;MKPPAACAGDMADAAS(0.702)PCS(0.298)VVNDLR;MKPPAACAGDMADAAS(0.913)PCS(0.087)VVNDLR 131.97 3.06E-08 8619800 54487 67386.3 63704.4 77207 62988.8 68005.6 65470.6 51163.6 57207 54854.9 TRUE FALSE 58658.56661 64039.99433 65828.2729 70898.94113 60515.54322 70593.60076 56874.23158 57850.85819 62182.76145 53064.98911 1.105409944 1.206821963 1.240521745 1.336077559 1.140404328 1.330323476 1.071784477 1.090188826 1.17182275 1 15.6954727 -7.286328096 24.96111935 1.090964729 1.22738649 0.446687862 0.077865573 760.8561568 763066.0613 0.031909217 0.021523961 5.17E-08 7.286328096 0.13642176 MKPPGGESSNLFGS(ph)PEEATPSSRPNR ddPTM_A459_MK2206_30min_R1 1 MKPPGGESSNLFGSPEEATPSSRPNR 26 2 Q9H910-2;H3BU16;H3BMT0 Q9H910-2 HN1L Hematological and neurological expressed 1-like protein 1 MKPPGGES(0.001)S(0.003)NLFGS(0.996)PEEATPSSRPNR 66.853 0.0015877 5722400 928.88 1283.3 1297.8 1170.2 1186.9 1066.1 1114.2 1128.2 1155.2 1325.5 TRUE FALSE 849.8738783 1199.756937 1209.708952 1260.329007 1139.62326 1126.461661 1039.873751 1118.336266 1275.287174 1489.712947 0.570495061 0.805361153 0.812041645 0.846021382 0.764995204 0.756160214 0.698036325 0.750705878 0.856062355 1 10.54081865 -8.570055992 2.693336768 0.999448925 0.756654224 0.537854816 0.071982364 0.245329557 4.363882949 0.070276547 0.018906003 2.69E-09 8.570055992 -0.242794701 MKS(ph)SSSVTTSETQPCTPSSSDYSDLQR ddPTM_A459_MK2206_30min_R1 1 MKSSSSVTTSETQPCTPSSSDYSDLQR 27 1 P50552;K7EM16 P50552 VASP Vasodilator-stimulated phosphoprotein 1 MKS(0.611)S(0.223)S(0.082)S(0.082)VT(0.001)TSETQPCTPSSSDYSDLQR 134.32 2.79E-12 8806700 516.11 396.09 484.6 393.59 496.82 379.68 580.78 448.04 308.28 272.46 TRUE FALSE 472.2121343 370.304469 451.7067022 423.90437 477.0306074 401.1771535 542.0372259 444.1228335 340.3268092 306.2144018 1.542096425 1.209298018 1.475132128 1.384338449 1.557832044 1.310118502 1.77012323 1.450365597 1.111400402 1 8.258398327 -8.331682066 3.786939299 1.015145877 1.461076413 0.568169078 0.143170658 0.166259233 4.393433431 0.133538495 0.036104211 4.66E-09 8.331682066 0.445930536 MKSS(ph)SSVTTSETQPCTPSSSDYSDLQR ddPTM_A459_MK2206_30min_R2 2 MKSSSSVTTSETQPCTPSSSDYSDLQR 27 1 P50552;K7EM16 P50552 VASP Vasodilator-stimulated phosphoprotein 1 MKS(0.124)S(0.498)S(0.189)S(0.189)VT(0.001)TSETQPCTPSSSDYSDLQR;MKS(0.124)S(0.49)S(0.187)S(0.187)VT(0.002)T(0.009)S(0.001)ETQPCTPSSSDYSDLQR 114.59 1.16E-11 33074000 40209 71212 63170 64794 54311 54645 65325 51911 49310 47689 TRUE FALSE 43287.43196 67675.71563 65276.05627 59500.12293 52178.47725 56724.55377 56747.74903 58695.94594 53598.89467 46132.91184 0.938319959 1.466972557 1.414956344 1.289754333 1.13104669 1.229589712 1.230092504 1.272322591 1.161836367 1 15.49350874 -9.669514707 0.396233343 0.949443977 1.27516184 0.21500575 0.138798466 8.279577456 1.577054557 0.76214854 0.098464331 2.14E-10 9.669514707 0.325717862 MLAEDELR ddPTM_A459_MK2206_30min_R1 1 MLAEDELR 8 0 P61204-2;P84077;P61204;F5H423 P61204-2 ARF3;ARF1 ADP-ribosylation factor 3;ADP-ribosylation factor 1 0 148.04 0.022485 4369600 4303.9 3793.5 3343.6 2905.1 4405.1 4130.2 4923.2 3447.1 3853.1 3964.2 FALSE TRUE 3937.830704 3546.542461 3116.645748 3128.851305 4229.635539 4364.048355 4594.782311 3416.962368 4253.643533 4455.315024 0.883850117 0.796025071 0.699534316 0.702273866 0.949346009 0.979515103 1.031303575 0.766940688 0.954734628 1 12.12131173 -6.273476798 24.41966605 0.941163982 0.767186394 0.527111779 0.081789386 474.1796003 961940.8566 0.026622029 0.030431681 5.33E-07 6.273476798 -0.173977588 MLAEDELR ddPTM_A459_MK2206_30min_R2 2 MLAEDELR 8 0 P61204-2;P84077;P61204;F5H423 P61204-2 ARF3;ARF1 ADP-ribosylation factor 3;ADP-ribosylation factor 1 0 ; 161.9 0.0053736 14138200 106332 99690 91383 114575 96091 101917 100910 104574 86028 92881 FALSE TRUE 114472.8597 94739.53956 94429.66361 105213.856 92317.98452 105795.5229 87660.39579 118242.1809 93510.55994 89850.30058 1.274039808 1.054415388 1.050966586 1.170990585 1.027464393 1.177464318 0.975627185 1.315990933 1.040737308 1 16.45523571 -4.752403165 24.83903545 1.098733565 1.274040176 0.236029956 0.098087984 482.8355275 1327128.429 0.02263015 0.268747478 1.77E-05 4.752403165 0.175306611 MLAESDES(ph)GDEESVSQTDKTELQNTLR ddPTM_A459_MK2206_30min_R1 2 MLAESDESGDEESVSQTDKTELQNTLR 27 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 MLAES(0.008)DES(0.826)GDEES(0.164)VS(0.001)QTDKTELQNTLR;MLAES(0.06)DES(0.597)GDEES(0.341)VS(0.002)QTDKTELQNTLR 111.01 5.15E-10 13655500 1117.34 1233.8 1209.42 1411.06 1423.07 1181.86 1157.42 1258.73 1115.71 944.96 TRUE FALSE 1022.304366 1153.479396 1127.32794 1519.740086 1366.386108 1248.775892 1080.210624 1247.725056 1231.692047 1062.028779 0.962595728 1.086109359 1.061485303 1.430978252 1.286581057 1.175839974 1.017119917 1.174850514 1.159753927 1 10.05260715 -10.60789253 14.57793358 0.99999998 1.15585019 0.109519005 0.128032708 0 0 0.133688394 0.032424198 2.47E-11 10.60789253 0.155850211 MLAQSALSPYLSS(ph)PVSSYQR ddPTM_A459_MK2206_30min_R2 1 MLAQSALSPYLSSPVSSYQR 20 0 F5H5C8;F8VV01;Q15434 F5H5C8 RBMS2 "RNA-binding motif, single-stranded-interacting protein 2" 1 MLAQSALSPYLS(0.049)S(0.951)PVSSYQR 204.51 1.07E-31 0 13071 16022 12042 13813 14124 18377 13881 11517 11908 15528 TRUE FALSE 14071.72581 15226.37078 12443.47427 12684.43371 13569.42079 19076.34961 12058.40803 13022.31144 12943.73632 15021.32263 0.936783408 1.013650472 0.828387391 0.844428552 0.903343941 1.269951394 0.802752748 0.866921759 0.861690853 1 13.87472423 -11.8450349 2.262747609 1.391981761 0.926857879 0.029290371 0.128697215 19141454.04 1879807.416 38700061.03 0.032895746 1.43E-12 11.8450349 -0.465123882 MLAS(ph)PAPEDEEK ddPTM_A459_MK2206_30min_R2 1 MLASPAPEDEEK 12 0 Q8TBP0 Q8TBP0 TBC1D16 TBC1 domain family member 16 1 MLAS(1)PAPEDEEK 107.53 0.0084425 1772300 19609 19745 18042 16503 17199 15606 18927 15816 12040 17261 TRUE FALSE 21110.28012 18764.49201 18643.51128 15154.65211 16523.68084 16199.89727 16441.86216 17883.2055 13087.21744 16697.77498 1.264257072 1.123772001 1.116526681 0.90758512 0.989573812 0.97018299 0.984673837 1.070993322 0.78377014 1 14.02736825 -5.178091547 1.23936769 0.96329022 1.284066621 0.618259702 0.077128069 0.523887034 1.098857179 0.023294053 0.179926732 6.64E-06 5.178091547 0.320776401 MLDAEDIVGTARPDEK ddPTM_A459_MK2206_30min_R2 1 MLDAEDIVGTARPDEK 16 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;G3V2N5;G3V2W4 P12814-4 ACTN1 Alpha-actinin-1 0 94.339 0.026193 3935900 19635 26722 23653 29074 22959 22698 22764 22219 25089 23018 FALSE TRUE 21138.2707 25395.02434 24441.57921 26698.5612 22057.5143 23561.7883 19775.05946 25123.09959 27271.19587 22266.92455 0.94931254 1.140481897 1.097663001 1.199023293 0.990595457 1.05815189 0.888091187 1.128269849 1.224740121 1 14.44261469 -11.88358039 2.320981182 0.488121358 1.074448946 0.046731106 0.101777933 10274331.43 2249580.997 27425556.74 0.026330809 1.31E-12 11.88358039 0.586327588 MLDAEDIVNTARPDEK ddPTM_A459_MK2206_30min_R1 2 MLDAEDIVNTARPDEK 16 1 O43707 O43707 ACTN4 Alpha-actinin-4 0 ; 119.54 0.0047198 8792200 4240.8 4439 4828.6 4400.4 4445.8 4211.5 4150.6 4197.9 3976.5 3392.9 FALSE TRUE 3880.097691 4150.020293 4500.848085 4739.31957 4268.714372 4449.95149 3873.721047 4161.198203 4389.871405 3813.238067 1.017533556 1.088319224 1.180321817 1.242859608 1.119446071 1.166974475 1.015861318 1.091250567 1.151218814 1 11.89680089 -7.24522292 24.75119485 1.072186883 1.139877772 0.205265947 0.06783218 1319.151979 2013427.116 0.027485442 0.021230512 5.69E-08 7.24522292 0.067690889 MLDAEDIVNTARPDEK ddPTM_A459_MK2206_30min_R2 1 MLDAEDIVNTARPDEK 16 1 O43707 O43707 ACTN4 Alpha-actinin-4 0 143.64 0.0011026 15868000 50106 50692 45387 48234 49093 49846 48274 41125 41424 49450 FALSE TRUE 53942.15388 48174.70899 46900.17993 44293.12791 47165.36215 51742.92446 41935.56581 46500.1787 45026.98464 47836.45055 1.127637048 1.007071144 0.980427674 0.925928396 0.985971192 1.081663122 0.876644595 0.972065824 0.941269348 1 15.54582273 -4.698962225 2.074250792 0.969041061 1.196352535 0.468945952 0.050222514 0.838495207 3.350435611 0.013443061 0.390250153 2.00E-05 4.698962225 0.227311474 MLEDS(ph)QRTEEENGK ddPTM_A459_MK2206_30min_R1 1 MLEDSQRTEEENGK 14 1 Q6P996-4 Q6P996-4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 MLEDS(0.969)QRT(0.031)EEENGK 92.151 0.039174 0 315.66 461.85 341.69 320.78 298.3 465.94 371.13 401.46 211.43 332.41 TRUE FALSE 288.8114594 431.7834811 318.4970348 345.4865312 286.4180793 492.3211201 346.3725949 397.9500775 233.4089051 373.5914604 0.773067615 1.155763787 0.85252761 0.924770954 0.766661205 1.31780614 0.927142699 1.065201215 0.624770451 1 8.545317668 -10.69966943 4.979348335 1.000004137 0.948029666 0.005814668 0.192799873 8.42E-06 1.39E-06 0.177571089 0.043063887 2.00E-11 10.69966943 -0.051974471 MLENTDNSS(ph)PSTEHSQGLEK ddPTM_A459_MK2206_30min_R1 1 MLENTDNSSPSTEHSQGLEK 20 0 Q96H79 Q96H79 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like 1 MLENT(0.167)DNS(0.244)S(0.588)PS(0.001)TEHSQGLEK 87.952 0.0047999 0 1393.5 1270.4 1555.5 874.16 1689.3 1760.7 1795.5 1579 962.33 953.65 TRUE FALSE 1274.975507 1187.696729 1449.916994 941.4879547 1622.011604 1860.389312 1675.725471 1565.194969 1062.367647 1071.795362 1.189569906 1.10813759 1.352792749 0.878421374 1.513359417 1.735769139 1.563475203 1.460348706 0.991203811 1 10.06581376 -5.267605692 23.36945229 1.344195908 1.148853739 0.046161716 0.265881639 525.6879136 1992305.224 0.073525852 0.159945229 5.40E-06 5.267605692 -0.19534217 MLFKDDYPSS(ph)PPK ddPTM_A459_MK2206_30min_R2 2 MLFKDDYPSSPPK 13 1 H3BPC4;H3BQQ9;B0QYN7;P63279 H3BPC4 UBE2I SUMO-conjugating enzyme UBC9 1 MLFKDDY(0.001)PS(0.158)S(0.841)PPK;MLFKDDY(0.001)PS(0.435)S(0.563)PPK 77.726 0.02339 12428400 113508 129824 132800 103382 127352 93185 157217 107029 103333 146373 TRUE FALSE 122198.2598 123377.1289 137227.4857 94935.3599 122351.5206 96731.22047 136574.219 121018.0578 112320.7176 141596.861 0.863001191 0.871326723 0.969142146 0.67046232 0.864083566 0.683145232 0.964528578 0.854666247 0.793242991 1 17.11142976 -10.28530437 8.049444043 0.999999995 0.837592718 0.209859657 0.094841079 0 8.30E-11 0.089668798 0.021747878 5.18E-11 10.28530437 -0.162407277 MLGEDS(ph)DEEEEMDTSER ddPTM_A459_MK2206_30min_R1 2 MLGEDSDEEEEMDTSER 17 0 A0A087X0M4;Q9BWU0;A0A087WWF4;H7C256 A0A087X0M4 SLC4A1AP Kanadaptin 1 MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER 254.72 4.28E-31 25026700 4436.5 4251.4 4509.7 4388.8 4506.7 3840.9 4845.2 4169.9 3717.1 4277.3 TRUE FALSE 4059.152378 3974.633087 4203.594129 4726.826136 4327.188596 4058.368439 4521.985549 4133.443004 4103.505847 4807.204216 0.84438942 0.826807622 0.874436354 0.983279662 0.900146614 0.844226344 0.940668494 0.859843439 0.853615878 1 12.23098238 MLGEDS(ph)DEEEEMDTSER ddPTM_A459_MK2206_30min_R2 5 MLGEDSDEEEEMDTSER 17 0 A0A087X0M4;Q9BWU0;A0A087WWF4;H7C256 A0A087X0M4 SLC4A1AP Kanadaptin 1 MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(0.995)DEEEEMDT(0.005)SER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER 292.38 6.46E-76 76375000 73679 86363 74510 94738 89887 82481.6 92388 71520.6 75344.3 83374.7 TRUE FALSE 79319.92089 82074.339 76994.12621 86997.60235 86357.58473 85620.49509 80257.34462 80868.58799 81897.61102 80654.19037 0.983456911 1.017607872 0.954620285 1.078649503 1.070714173 1.061575285 0.995079664 1.002658233 1.01541669 1 16.29946187 -5.752455724 24.99977341 1.033429502 0.98846632 0.310489259 0.031790943 272.0125667 756951.621 0.009454857 0.016071628 1.77E-06 5.752455724 -0.044963182 MLGEDS(ph)DEEEEMDTSERK ddPTM_A459_MK2206_30min_R1 2 MLGEDSDEEEEMDTSERK 18 1 A0A087X0M4;Q9BWU0;A0A087WWF4;H7C256 A0A087X0M4 SLC4A1AP Kanadaptin 1 MLGEDS(0.99)DEEEEMDT(0.005)S(0.005)ERK;MLGEDS(1)DEEEEMDTSERK 93.115 0.0024312 4184000 1154.44 1159.27 964.77 1031.46 1324.48 1221.6 1061.37 1071.86 1167.44 1070.76 TRUE FALSE 1056.248816 1083.801312 899.2841004 1110.903228 1271.723157 1290.765936 990.5679439 1062.488841 1288.799566 1203.413833 0.877710383 0.900605663 0.747277517 0.923126524 1.056762954 1.07258692 0.823131592 0.882895653 1.070952926 1 10.23291713 -5.993350103 24.64521472 0.976249722 0.845649166 0.361815913 0.084368995 176.8830789 655536.1556 0.025208475 0.037284563 1.02E-06 5.993350103 -0.130600555 MLGEDS(ph)DEEEEMDTSERK ddPTM_A459_MK2206_30min_R2 2 MLGEDSDEEEEMDTSERK 18 1 A0A087X0M4;Q9BWU0;A0A087WWF4;H7C256 A0A087X0M4 SLC4A1AP Kanadaptin 1 MLGEDS(1)DEEEEMDTSERK;MLGEDS(1)DEEEEMDTSERK 120.79 0.0004855 15133600 35398 32961 38168 42021 38020 30866 41209 32840 27472 41453 TRUE FALSE 38108.0981 31324.20467 39440.50207 38587.74988 36527.14376 32040.62726 35798.2088 37132.30076 29861.4649 40100.392 0.950317346 0.7811446 0.983544053 0.96227862 0.910892436 0.799010325 0.892714685 0.925983485 0.744667656 1 15.29132872 -6.557376814 24.96701672 0.867540503 0.916857195 0.069146551 0.082119848 503.0831796 364089.3018 0.026421526 0.026421652 2.77E-07 6.557376814 0.049316692 MLHFHY(ph)Y(ph)DTS(ph)NK ddPTM_A459_MK2206_30min_R1 1 MLHFHYYDTSNK 12 0 Q6ZQW0-2;Q6ZQW0 Q6ZQW0-2 IDO2 "Indoleamine 2,3-dioxygenase 2" 3 MLHFHY(1)Y(0.999)DT(0.013)S(0.988)NK 77.078 0.018506 0 2055 2034.2 2190.4 1967.5 1910.4 2104.6 2061.3 2011.6 1628.9 1671.2 TRUE FALSE 1880.211459 1901.77321 2041.721751 2119.037191 1834.304723 2223.760633 1923.794438 1994.012793 1798.229984 1878.240873 1.001049166 1.012528924 1.087039357 1.128203108 0.976607819 1.183959238 1.024253314 1.061638484 0.957401157 1 10.87516638 -8.251963527 23.76232507 0.978700579 1.061281006 0.225773093 0.059703189 438.4491257 1099499.357 0.040661055 0.014866375 5.60E-09 8.251963527 0.082580426 MLISAVS(ph)PEIR ddPTM_A459_MK2206_30min_R1 1 MLISAVSPEIR 11 0 A0AVK6;E9PMT9 A0AVK6 E2F8 Transcription factor E2F8 1 MLIS(0.028)AVS(0.972)PEIR 106.26 0.011224 4121300 1065.7 1116.4 1040.2 810.85 1035.4 1183.1 1401.9 1161.8 754.98 977.13 TRUE FALSE 975.0566188 1043.722157 969.5941222 873.3018075 994.1578255 1250.0861 1308.381809 1151.642505 833.4628727 1098.184241 0.887880724 0.950407152 0.882906607 0.795223401 0.905274168 1.138320923 1.191404647 1.048678775 0.758946305 1 10.1009044 -6.626320308 7.550648615 1.040282801 0.880367267 0.288384008 0.112055018 0.303225091 19.72466934 0.039307412 0.039265201 2.36E-07 6.626320308 -0.159915534 MLISAVS(ph)PEIR ddPTM_A459_MK2206_30min_R2 2 MLISAVSPEIR 11 0 A0AVK6;E9PMT9 A0AVK6 E2F8 Transcription factor E2F8 1 MLIS(0.247)AVS(0.753)PEIR;MLIS(0.195)AVS(0.805)PEIR 93.345 0.02373 7708600 24455 25246 22300.8 28736 26040 29192 26595 24791 28025 25926 TRUE FALSE 26327.2936 23992.32035 23044.29754 26388.17688 25017.53876 30302.92202 23103.04455 28031.26882 30462.56384 25080.03674 1.049731062 0.956630191 0.918830294 1.052158621 0.997508059 1.208248709 0.921172676 1.117672558 1.214614004 1 14.61425184 -6.307968767 2.007004191 1.087625527 0.978798228 0.195281497 0.09152557 0.530660108 4.200586584 0.031515467 0.03963958 4.92E-07 6.307968767 -0.108827299 MLLGASWLCAS(ph)K ddPTM_A459_MK2206_30min_R1 1 MLLGASWLCASK 12 0 Q8TEJ3 Q8TEJ3 SH3RF3 SH3 domain-containing RING finger protein 3 1 MLLGAS(0.093)WLCAS(0.907)K 89.355 0.025893 5344500 2014.2 2022.2 1825.3 1855.9 2361.6 1900.5 1972.6 2139.7 1921.7 1961.7 TRUE FALSE 1842.881713 1890.554412 1701.403722 1998.84174 2267.532471 2008.104668 1841.011453 2120.992828 2121.467592 2204.730206 0.835876294 0.857499211 0.771706088 0.90661512 1.028485238 0.910816508 0.835027999 0.962019218 0.962234556 1 11.10638641 -1.522878745 0.154242529 1.011084548 0.26874257 0.413102218 0.059584894 74.43115294 0.750175153 0.215788762 12.43796771 0.03 1.522878745 -0.742341978 MLLS(ph)PGGVSQPLTASLAR ddPTM_A459_MK2206_30min_R1 1 MLLSPGGVSQPLTASLAR 18 0 I3L0U5;Q6PK04 I3L0U5 CCDC137 Coiled-coil domain-containing protein 137 1 MLLS(0.979)PGGVS(0.019)QPLT(0.002)ASLAR 174.87 1.10E-08 16263000 1977.9 1958.8 1645.5 1655.5 1875.5 1260.4 1248.3 1502.7 1032.1 719.64 TRUE FALSE 1809.669219 1831.281764 1533.808045 1783.006897 1800.794864 1331.762759 1165.028185 1489.562052 1139.390488 808.7944362 2.237489698 2.264211624 1.896412705 2.204524187 2.226517373 1.646602275 1.440450296 1.841706601 1.40875164 1 9.659629263 -7.742634329 0.309620955 0.92189972 2.380543951 0.80283543 0.183433435 0.688755494 0.221867017 0.329891025 0.354112376 1.81E-08 7.742634329 1.458644232 up MLLS(ph)PGGVSQPLTASLAR ddPTM_A459_MK2206_30min_R2 4 MLLSPGGVSQPLTASLAR 18 0 I3L0U5;Q6PK04 I3L0U5 CCDC137 Coiled-coil domain-containing protein 137 1 MLLS(1)PGGVSQPLTASLAR;MLLS(0.999)PGGVSQPLT(0.001)ASLAR;MLLS(1)PGGVSQPLTASLAR;MLLS(1)PGGVSQPLTASLAR 214.24 3.54E-12 30478900 58606 68467 59045 68169 69207 70383 76227 57768 58671 66125 TRUE FALSE 63092.92042 65067.02834 61013.53083 62599.37464 66489.58544 73061.47438 66218.30333 65318.47595 63774.09753 63967.34667 0.986330115 1.017191297 0.953823068 0.978614526 1.039430098 1.142168281 1.035189152 1.021122172 0.996978941 1 15.96504802 -6.285983568 7.298622291 1.045293296 0.984174886 0.299881589 0.040659662 0.254158157 58.94244338 0.0133811 0.015524014 5.18E-07 6.285983568 -0.06111841 MLLS(ph)WDGGESR ddPTM_A459_MK2206_30min_R1 3 MLLSWDGGESR 11 0 Q658Y4;E7ER68 Q658Y4 FAM91A1 Protein FAM91A1 1 MLLS(0.959)WDGGES(0.041)R;MLLS(0.866)WDGGES(0.134)R;MLLS(1)WDGGESR 152.67 0.00057414 9836800 4793.36 4445.96 5705.97 4327.06 5838.35 4637.26 4790.83 4344.44 4148.41 3820.92 TRUE FALSE 4385.659561 4156.527196 5318.664654 4660.330911 5605.796157 4899.817654 4471.242472 4306.457019 4579.652065 4294.284416 1.021278317 0.967920797 1.238545038 1.085240394 1.305408681 1.141009113 1.04120781 1.002834606 1.066452899 1 12.06820203 -7.312692843 5.426642586 1.026388075 1.130694236 0.215054676 0.092608149 0.363329888 24.75973639 0.041864276 0.028229701 4.87E-08 7.312692843 0.104306161 MLPDKDCR ddPTM_A459_MK2206_30min_R2 2 MLPDKDCR 8 1 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;E9PLJ3;E9PS23 P23528 CFL1 Cofilin-1 0 ; 115.46 0.027707 203965200 533174 719225 600393 709475 685316 609825 663810 604704 531617 562111 FALSE TRUE 573994.2114 683509.3324 620409.803 651508.623 658407.0504 633032.3177 576650.9496 683740.8891 577856.0857 543769.3641 1.055583947 1.256983893 1.140942914 1.19813411 1.210820421 1.164155908 1.060469728 1.25740973 1.062685991 1 19.05263535 -8.48809736 6.636831546 1.000083086 1.168618955 0.422038494 0.066045899 0.151071156 20.70176991 0.059529204 0.015410603 3.25E-09 8.48809736 0.168535869 MLPHAPGVQMQAIPEDAVHEDS(ph)GDEDGEDPDKR ddPTM_A459_MK2206_30min_R1 3 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR 33 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 1 MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR 69.292 7.62E-05 27678900 2875.36 3101.86 3074.78 2831.72 2307.25 2574.93 2597.91 2496.01 2741.69 2476.94 TRUE FALSE 2630.795533 2899.92835 2866.0725 3049.819565 2215.347347 2720.720311 2424.608164 2474.187648 3026.698487 2783.802027 0.945036862 1.041715008 1.029553277 1.095559072 0.795799171 0.977339726 0.87097004 0.888780029 1.087253496 1 11.4428409 -6.232547017 24.99978613 0.92987581 1.029061486 0.228070821 0.08167968 1007.501554 871764.086 0.023445052 0.030262492 5.85E-07 6.232547017 0.099185676 MLPHAPGVQMQAIPEDAVHEDS(ph)GDEDGEDPDKR ddPTM_A459_MK2206_30min_R2 13 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR 33 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 1 MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR 68.461 8.77E-05 221539200 360093.6 406023.8 413006.6 393795.4 402394.7 291801.2 436757.6 344629 318250.6 446958.4 TRUE FALSE 387662.6429 385861.2485 426776.0339 361621.0561 386594.6622 302905.8991 379410.8025 389673.1936 345931.4619 432374.184 0.896590632 0.892424346 0.987052534 0.83636135 0.894120594 0.700564257 0.87750568 0.901240657 0.800074275 1 18.72192086 -5.792427879 24.98408997 0.850126296 0.922062782 0.131156717 0.076533892 350.4583292 282551.3019 0.021002372 0.031155314 1.61E-06 5.792427879 0.071936487 MLQHIDYR ddPTM_A459_MK2206_30min_R1 2 MLQHIDYR 8 0 J3KRY3;S4R3P3;J3QLE5;P14678-2;P63162;P14678;P63162-2;P14678-3 J3KRY3 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated proteins B and B;Small nuclear ribonucleoprotein-associated protein N 0 ; 107.47 0.018673 32015000 10101.4 9932.1 10142.2 10074.2 10504.5 11173.4 10622.2 10282 9045.2 9643.7 FALSE TRUE 9242.222885 9285.518485 9453.775722 10850.11663 10086.08352 11806.02825 9913.612419 10192.10556 9985.480909 10838.43436 0.852726748 0.856721384 0.872245511 1.001077856 0.930584915 1.089274323 0.914671999 0.940366959 0.921302891 1 13.40386875 -5.686530204 6.132305737 0.969317162 0.857907642 0.515950588 0.049093375 0.170578696 10.6952691 0.013510436 0.023501345 2.06E-06 5.686530204 -0.11140952 MLQHIDYR ddPTM_A459_MK2206_30min_R2 3 MLQHIDYR 8 0 J3KRY3;S4R3P3;J3QLE5;P14678-2;P63162;P14678;P63162-2;P14678-3 J3KRY3 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated proteins B and B;Small nuclear ribonucleoprotein-associated protein N 0 ;; 138.06 0.0035009 21430600 124759 172519 147644 165143 160456 170817 156807 137539 156312 154421 FALSE TRUE 134310.645 163951.9573 152566.3773 151650.2886 154155.6912 177317.5606 136218.0525 155515.8195 169907.7352 149382.2554 0.89910709 1.097533016 1.021315262 1.015182749 1.031954503 1.187005512 0.911875726 1.041059523 1.137402396 1 17.18864926 -4.74942401 24.94608569 1.048074352 0.899106744 0.277884208 0.072591809 744.9182079 1546487.476 0.017580904 0.290667844 1.78E-05 4.74942401 -0.148967609 MLSLPEELARMY(ph)RDDIT(ph)IIVVQFNS(ph)HVVGAY(ph)QNQE ddPTM_A459_MK2206_30min_R2 1 MLSLPEELARMYRDDITIIVVQFNSHVVGAYQNQE 35 2 Q9P0J1;Q9P0J1-2 Q9P0J1 PDP1 "[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial" 4 MLS(0.002)LPEELARMY(0.999)RDDIT(0.999)IIVVQFNS(1)HVVGAY(1)QNQE 44.278 0.0063449 5599100 3062.4 4004.3 4367.6 5589.6 4284.2 3118.1 5174.1 3278.1 4874.4 3525.5 TRUE FALSE 3296.859699 3805.452285 4513.213604 5132.9118 4115.980782 3236.76148 4494.734455 3706.558925 5298.366501 3410.463224 0.966689708 1.115816836 1.323343284 1.505048277 1.206868543 0.949067991 1.317924915 1.08681979 1.553562127 1 11.73575199 -4.962806404 3.557672097 1.245697899 0.974068802 0.177117891 0.186890834 0.413578526 10.52129004 0.047671671 0.235444134 1.09E-05 4.962806404 -0.271629097 MLSPANS(ph)LDIAMEK ddPTM_A459_MK2206_30min_R2 1 MLSPANSLDIAMEK 14 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 MLS(0.497)PANS(0.503)LDIAMEK 139.34 0.00059491 0 4640 4691.9 3769.3 5795.5 4365.8 3994.9 6357.7 4882.2 5210.7 5029.7 TRUE FALSE 4995.241968 4458.907069 3894.966581 5321.989111 4194.376756 4146.928719 5522.926353 5520.320303 5663.917267 4865.581301 1.026648546 0.916418161 0.80051413 1.093803347 0.862050492 0.852298721 1.135101031 1.134565422 1.16407823 1 12.24839646 -7.271752925 24.91469036 1.119649971 0.923999378 0.498702785 0.089669487 547.4925507 1322586.017 0.036746196 0.025078862 5.35E-08 7.271752925 -0.195650593 MLTTVGPASS(ph)SPK ddPTM_A459_MK2206_30min_R2 2 MLTTVGPASSSPK 13 0 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1 A0A0A0MTL4 NAV2 Neuron navigator 2 1 MLTTVGPAS(0.001)S(0.646)S(0.353)PK;MLTTVGPAS(0.145)S(0.746)S(0.109)PK 214 2.50E-06 8554400 71545 76630 72793 60133 82719 58834 88481 64361 62029 79701 TRUE FALSE 77022.54021 72824.66563 75219.88229 55219.94154 79471.03643 61072.9691 76863.33842 72773.20368 67424.1703 77100.3629 0.998990631 0.944543747 0.975609964 0.716208582 1.030747891 0.792122978 0.996925767 0.94387628 0.874498741 1 16.23445003 MLTTVGPASSS(ph)PK ddPTM_A459_MK2206_30min_R1 1 MLTTVGPASSSPK 13 0 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1 A0A0A0MTL4 NAV2 Neuron navigator 2 1 MLTTVGPAS(0.063)S(0.215)S(0.722)PK 108.68 0.0061918 8558600 2353.8 2321.5 2519.2 2180.5 2062.4 1917.9 2325.8 1891.5 2071.3 1979.1 TRUE FALSE 2153.59695 2170.369928 2348.203723 2348.442488 1980.250241 2026.489841 2170.650126 1874.962815 2286.619047 2224.285849 0.968219508 0.975760345 1.055711308 1.055818652 0.89028586 0.911074375 0.975886317 0.842950476 1.028023915 1 11.11912649 -6.260675713 24.99862869 0.9337287 1.014142935 0.272502097 0.05722666 86.69082787 2837821.525 0.016915379 0.02054321 5.49E-07 6.260675713 0.080414235 MLWGSDPYPHAEPQQAT(ph)TPK ddPTM_A459_MK2206_30min_R1 1 MLWGSDPYPHAEPQQATTPK 20 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 MLWGSDPYPHAEPQQAT(0.702)T(0.297)PK 76.768 0.0075263 17118000 2150.4 2254.1 2477.5 2150.1 1843.5 1446.3 1791.3 1698.7 1573.9 1545.7 TRUE FALSE 1967.497188 2107.35768 2309.334203 2315.701075 1770.069491 1528.188256 1671.805645 1683.848445 1737.512537 1737.192985 1.132572607 1.21308208 1.329348105 1.333013139 1.018925074 0.879688249 0.962360348 0.96929268 1.000183947 1 10.76254232 -6.376690525 4.984099971 0.959735613 1.253641393 0.830180693 0.062393088 0.093468115 3.464240728 0.021157955 0.024052213 4.20E-07 6.376690525 0.29390578 MLWGSDPYPHAEPQQAT(ph)TPK ddPTM_A459_MK2206_30min_R2 1 MLWGSDPYPHAEPQQATTPK 20 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 MLWGSDPYPHAEPQQAT(0.54)T(0.46)PK 72.864 0.013014 6475000 23310 26472 21637 20819 19821 18735 24622 16735 16338 19340 TRUE FALSE 25094.63152 25157.43897 22358.36678 19118.0211 19042.72795 19447.97355 21389.10182 18922.32196 17759.04971 18708.93738 1.341317842 1.344674925 1.195063425 1.021865684 1.017841236 1.039501771 1.143255835 1.011405489 0.949228133 1 14.19144 -5.522834423 2.502317453 1.030821523 1.345671882 0.881957997 0.046818329 0.095848084 1.190437527 0.014338764 0.033058219 3.00E-06 5.522834423 0.314850359 MLWGSDPYPHAEPQQATT(ph)PK ddPTM_A459_MK2206_30min_R1 1 MLWGSDPYPHAEPQQATTPK 20 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 MLWGSDPYPHAEPQQAT(0.36)T(0.639)PK 66.383 0.021342 19751000 3254.3 3514.9 3338.4 3467 2649.1 2027.9 2467 2207.6 2716.9 1961.3 TRUE FALSE 2977.504696 3286.079371 3111.798709 3734.028941 2543.580737 2142.717946 2302.430931 2188.299186 2999.331478 2204.280651 1.350782939 1.490771772 1.411707129 1.693989801 1.153927807 0.972071294 1.044527125 0.992749805 1.360684936 1 11.10609221 -6.418890145 6.07695718 1.070783445 1.479981018 0.690877292 0.131681595 0.132608891 6.548103871 0.040378586 0.045694699 3.81E-07 6.418890145 0.409197573 MLWGSDPYPHAEPQQATT(ph)PK ddPTM_A459_MK2206_30min_R2 2 MLWGSDPYPHAEPQQATTPK 20 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 MLWGSDPYPHAEPQQAT(0.094)T(0.906)PK;MLWGSDPYPHAEPQQAT(0.229)T(0.771)PK 104.23 0.00072521 19422400 48688 48487 48219 46904 46598 32955 50682 37451 33352 48946 TRUE FALSE 52415.59071 46079.20609 49826.59739 43071.79316 44768.32838 34209.12562 44027.39252 42345.97429 36252.89667 47348.89603 1.107007663 0.973184381 1.052328598 0.909668372 0.945498885 0.722490459 0.929850455 0.89433921 0.765654529 1 15.53104317 -5.928388649 1.581401002 0.862735996 1.046500666 0.444393754 0.083355746 0.345687164 1.756091955 0.026856147 0.049364831 1.18E-06 5.928388649 0.183764671 MMDSS(ph)PVR ddPTM_A459_MK2206_30min_R2 1 MMDSSPVR 8 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 MMDS(0.112)S(0.888)PVR 85.67 0.034948 2556100 40436 44440 39597 53544 48008 43272 46936 31832 36142 37633 TRUE FALSE 43531.81125 42233.17422 40917.14422 49169.28392 46122.9647 44918.74628 40773.24682 35992.5517 39285.56583 36405.03829 1.195763369 1.160091465 1.123941799 1.350617558 1.266939052 1.233860707 1.119989121 0.988669519 1.07912442 1 15.15185051 -7.492734574 3.314187819 1.026262313 1.221944585 0.676670947 0.061832159 0.160623136 3.619330476 0.03304626 0.019481636 3.22E-08 7.492734574 0.195682272 MMGASTLQEPALSPGRCPR ddPTM_A459_MK2206_30min_R1 1 MMGASTLQEPALSPGRCPR 19 1 Q9NWV8-2 Q9NWV8-2 BABAM1 BRISC and BRCA1-A complex member 1 0 67.385 0.034657 0 398.62 403.86 576.05 497.3 472.17 471.01 468.3 548.58 380.13 365.5 FALSE TRUE 364.7152758 377.5686406 536.949331 535.6021322 453.3624691 497.6781792 437.0605615 543.7838229 419.6458738 410.7808994 0.887858409 0.919148483 1.307142888 1.303863283 1.103660053 1.211541676 1.063974888 1.323780691 1.021580785 1 8.68222529 -5.196839956 8.272956868 1.178928101 0.901124874 0.457783518 0.114105757 0.283335109 33.46206407 0.027643628 0.07366829 6.36E-06 5.196839956 -0.277803227 MMNGGHYTYSENR ddPTM_A459_MK2206_30min_R2 1 MMNGGHYTYSENR 13 0 Q99497;K7ELW0 Q99497 PARK7 Protein deglycase DJ-1 0 102.33 0.013191 4460200 8854.4 13512 11060 14929 15614 13893 13615 13553 14416 11174 FALSE TRUE 9532.299672 12841.01373 11428.73488 13709.25294 15000.91591 14421.70785 11827.33415 15324.42363 15669.87762 10809.3933 0.881853348 1.187949534 1.057296609 1.268272193 1.387766686 1.334182914 1.094171876 1.417695075 1.449653759 1 13.39999793 -3.986305994 0.707163238 1.295425004 4.26E-15 0.376595921 0.145575867 8.308819004 1.385009945 0.057860101 11.15657908 0.000103203 3.986305994 -1.295425004 MMS(ph)S(ph)S(ph)WPGTS(ph)PRLSR ddPTM_A459_MK2206_30min_R2 1 MMSSSWPGTSPRLSR 15 1 Q18PE1-2 Q18PE1-2 4 MMS(0.966)S(0.787)S(0.787)WPGT(0.487)S(0.705)PRLS(0.268)R 43.914 0.0475 6224800 7691.2 9971.5 7861.6 9404 6748.6 8324.7 12042 8556.7 7716 7192.4 TRUE FALSE 8280.044186 9476.32981 8123.70182 8635.663118 6483.616055 8641.502292 10460.87093 9675.09007 8387.123733 6957.712577 1.190052635 1.361989261 1.167582266 1.241164107 0.931860289 1.242003345 1.503492825 1.390556158 1.205442685 1 12.76439737 -7.003566909 24.99610141 1.316751961 1.181127261 0.052543111 0.15866739 308.452596 2161582.091 0.056644885 0.048946066 9.92E-08 7.003566909 -0.1356247 MNFT(ph)PT(ph)HTPVCRK ddPTM_A459_MK2206_30min_R1 1 MNFTPTHTPVCRK 13 1 Q9BR77;F5H5Q8 Q9BR77 CCDC77 Coiled-coil domain-containing protein 77 2 MNFT(0.975)PT(0.512)HT(0.512)PVCRK 117.02 0.00725 0 1187 563.74 676.81 969.08 432.46 778.35 670.08 637.42 618.87 593.64 TRUE FALSE 1086.039417 527.0404235 630.8700229 1043.71871 415.2342025 822.4195044 625.3801858 631.8471041 683.2037511 667.184605 1.62779448 0.78994692 0.945570414 1.564362699 0.622367782 1.232671585 0.937342051 0.947034898 1.024010066 1 9.381942189 -4.748158707 24.98236797 1.013727157 1.627795981 0.378170684 0.238662547 696.6174235 1310335.005 0.05664717 1.063264621 1.79E-05 4.748158707 0.614068824 MNGVMFPGNS(ph)PSYTER ddPTM_A459_MK2206_30min_R1 11 MNGVMFPGNSPSYTER 16 0 Q9NY27-2;Q9NY27-3;Q9NY27 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 MNGVMFPGNS(0.856)PS(0.143)YTER;MNGVMFPGNS(0.498)PS(0.498)YT(0.004)ER;MNGVMFPGNS(0.642)PS(0.355)YT(0.003)ER;MNGVMFPGNS(0.953)PS(0.045)YT(0.002)ER;MNGVMFPGNS(0.831)PS(0.151)YT(0.017)ER;MNGVMFPGNS(0.969)PS(0.03)YTER;MNGVMFPGNS(0.993)PS(0.007)YTER;MNGVMFPGNS(0.886)PS(0.112)YT(0.002)ER;MNGVMFPGNS(0.989)PS(0.011)YTER;MNGVMFPGNS(0.989)PS(0.01)YTER;MNGVMFPGNS(0.677)PS(0.317)YT(0.006)ER 300.29 5.09E-88 196771200 36023.7 33972.7 34119.8 29096.07 36274.7 30595.6 33658.5 32653.4 30364.4 25442.32 TRUE FALSE 32959.69515 31761.07106 31803.84304 31337.05435 34829.80189 32327.89643 31413.20288 32367.91477 33520.88804 28594.30668 1.152666351 1.110748073 1.112243895 1.095919363 1.218067718 1.130571089 1.098582429 1.13197061 1.172292387 1 14.8034403 -11.0147665 5.858942866 0.999858362 1.134332027 0.568356429 0.03550518 6.71E-05 5.82E-06 0.035120822 0.00850911 9.67E-12 11.0147665 0.134473665 MNGVMFPGNS(ph)PSYTER ddPTM_A459_MK2206_30min_R2 13 MNGVMFPGNSPSYTER 16 0 Q9NY27-2;Q9NY27-3;Q9NY27 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 MNGVMFPGNS(0.494)PS(0.494)YT(0.012)ER;MNGVMFPGNS(0.969)PS(0.029)YT(0.002)ER;MNGVMFPGNS(0.929)PS(0.069)YT(0.002)ER;MNGVMFPGNS(0.989)PS(0.007)YT(0.004)ER;MNGVMFPGNS(0.661)PS(0.339)YTER;MNGVMFPGNS(0.952)PS(0.047)YT(0.001)ER;MNGVMFPGNS(0.979)PS(0.02)Y(0.001)TER;MNGVMFPGNS(0.969)PS(0.03)YT(0.001)ER;MNGVMFPGNS(0.95)PS(0.043)Y(0.007)TER;MNGVMFPGNS(0.795)PS(0.196)YT(0.009)ER;MNGVMFPGNS(0.997)PS(0.003)YTER;MNGVMFPGNS(0.993)PS(0.007)YTER;MNGVMFPGNS(0.684)PS(0.313)Y(0.001)T(0.002)ER 150.01 0.00024249 154534400 350089 415798 385722 466298 411754 420593 439311 340187 380110 398003 TRUE FALSE 376892.083 395150.0759 398581.779 428199.9618 395586.4691 436598.9613 381628.938 384650.6089 413171.2807 385016.1947 0.978899299 1.026320662 1.035233802 1.112160911 1.027454103 1.133975576 0.991202301 0.999050467 1.073127018 1 18.5545596 -4.809070075 2.075214698 1.049132951 0.962256102 0.168396531 0.045453349 1.184189787 6.02533641 0.012191971 0.19274188 1.55E-05 4.809070075 -0.086876848 MNGVMFPGNSPS(ph)YTER ddPTM_A459_MK2206_30min_R1 1 MNGVMFPGNSPSYTER 16 0 Q9NY27-2;Q9NY27-3;Q9NY27 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 MNGVMFPGNS(0.115)PS(0.876)YT(0.009)ER 185.86 7.84E-07 48522000 6942.5 6358.5 6099.5 5585.1 6590.5 5488.6 6641.4 6209.9 6011.3 5090.8 TRUE FALSE 6352.003918 5944.560494 5685.482934 6015.26537 6327.986429 5799.359789 6198.364324 6155.607499 6636.196147 5721.486738 1.110201633 1.038988775 0.993707264 1.051346555 1.106003862 1.013610632 1.083348544 1.075875517 1.159872678 1 12.48217437 -7.481774134 24.05116761 1.086646904 1.051190897 0.062579442 0.04933357 753.9103386 441129.9959 0.020280379 0.013670647 3.30E-08 7.481774134 -0.035456007 MNGVMFPGNSPS(ph)YTER ddPTM_A459_MK2206_30min_R2 4 MNGVMFPGNSPSYTER 16 0 Q9NY27-2;Q9NY27-3;Q9NY27 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 MNGVMFPGNS(0.205)PS(0.738)YT(0.057)ER;MNGVMFPGNS(0.274)PS(0.717)YT(0.009)ER;MNGVMFPGNS(0.295)PS(0.636)Y(0.064)T(0.004)ER;MNGVMFPGNS(0.127)PS(0.832)Y(0.001)T(0.04)ER 146.67 0.0003398 89003600 116199 142284 134605 135955 126007 141061 134861 101539 129543 127367 TRUE FALSE 125095.2848 135218.3835 139092.6635 124847.0416 121059.332 146429.1752 117153.5887 114810.4959 140810.416 123211.0252 1.015292946 1.097453602 1.128897867 1.013278165 0.982536521 1.188442146 0.950836895 0.931819987 1.142839415 1 16.91077183 MNIAS(ph)PGTVHK ddPTM_A459_MK2206_30min_R2 1 MNIASPGTVHK 11 0 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 MNIAS(0.993)PGT(0.007)VHK 104.9 0.0079386 4707400 53559 49189 47409 53288 49310 54029 68029 64094 53044 74961 TRUE FALSE 57659.51822 46746.34579 48989.5924 48934.19994 47373.84164 56085.11145 59096.71058 72471.30587 57657.67124 72515.02871 0.795138873 0.644643553 0.675578473 0.674814598 0.653296875 0.773427418 0.814958108 0.999397051 0.795113403 1 16.1459924 -7.295163184 1.833993273 0.922903257 0.686064469 0.687642403 0.069475909 0.194085272 1.27248404 0.035238364 0.021394686 5.07E-08 7.295163184 -0.236838788 MNILGS(ph)QSPLHPSTLSTVIHR ddPTM_A459_MK2206_30min_R2 1 MNILGSQSPLHPSTLSTVIHR 21 0 A0A2R8YCL1;Q13322-3;Q13322-2;Q13322-4;Q13322 A0A2R8YCL1 GRB10 Growth factor receptor-bound protein 10 1 MNILGS(0.5)QS(0.5)PLHPSTLSTVIHR 71.376 0.0028368 3119500 5593.1 9210.7 8175 13183 13204 19727 15804 9658.5 16853 9830.6 TRUE FALSE 6021.312036 8753.310032 8447.55042 12105.90673 12685.54462 20477.72481 13728.91582 10920.89911 18318.84348 9509.828327 0.63316727 0.920448796 0.888296837 1.272988987 1.333940443 2.153322237 1.443655484 1.148380259 1.926306432 1 13.21520358 -5.879474009 1.712395015 1.541057981 0.775143266 0.475863901 0.324282963 0.313094042 1.870462268 0.104546909 0.195378507 1.32E-06 5.879474009 -0.765914714 MNS(ph)LTFK ddPTM_A459_MK2206_30min_R1 2 MNSLTFK 7 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 MNS(0.994)LT(0.006)FK;MNS(0.845)LT(0.155)FK 101.66 0.019777 53120000 10718.7 12738.5 12776.6 10088.7 9127.5 9612.3 11242.2 11201.3 12778.9 13023.4 TRUE FALSE 9807.018279 11909.22133 11909.35999 10865.73342 8763.932347 10156.54012 10492.25335 11103.36822 14107.31238 14636.83711 0.670023052 0.813647186 0.813656659 0.742355287 0.598758617 0.693902654 0.716838841 0.75859068 0.963822462 1 13.83731621 -8.262787209 3.144613982 1.000112945 0.723781188 0.747658585 0.059985698 0.136111821 2.587272617 0.060263335 0.017375188 5.46E-09 8.262787209 -0.276331757 MNS(ph)TGGQTPR ddPTM_A459_MK2206_30min_R1 4 MNSTGGQTPR 10 0 Q96ST2;Q96ST2-3;Q96ST2-2;A0A1B0GW95 Q96ST2 IWS1 Protein IWS1 homolog 1 MNS(0.765)T(0.232)GGQT(0.003)PR;MNS(0.894)T(0.104)GGQT(0.001)PR;MNS(0.769)T(0.231)GGQTPR;MNS(0.771)T(0.229)GGQTPR 124.48 0.0038268 58964000 12001.9 11593.8 12334.1 8170.8 9609.5 8098.1 10421.1 10716.2 8223.2 12672.8 TRUE FALSE 10981.07538 10839.04151 11496.89566 8800.116432 9226.733267 8556.607424 9725.927433 10622.50939 9078.031067 14242.80214 0.770991219 0.761018893 0.807207426 0.617864122 0.647817275 0.600767134 0.682866148 0.745815977 0.637376759 1 13.79794539 -10.57816008 4.751512191 1.000007547 0.696427407 0.643589193 0.067675827 76198500.28 2.08193884 8211.248966 0.018408438 2.64E-11 10.57816008 -0.30358014 MNS(ph)TGGQTPR ddPTM_A459_MK2206_30min_R2 3 MNSTGGQTPR 10 0 Q96ST2;Q96ST2-3;Q96ST2-2;A0A1B0GW95 Q96ST2 IWS1 Protein IWS1 homolog 1 MNS(0.922)T(0.074)GGQT(0.004)PR;MNS(0.964)T(0.034)GGQT(0.002)PR;MNS(0.916)T(0.084)GGQTPR 123.26 0.00421 69616000 214385 205754 188781 202086 153900 158621 154078 133030 141196 177899 TRUE FALSE 230798.4804 195536.5556 195074.8643 185574.9274 147857.1127 164657.4333 133847.3735 150417.4778 153476.9729 172094.1702 1.341117367 1.136218358 1.133535576 1.078333607 0.859163983 0.956786817 0.777756582 0.874041681 0.891819709 1 17.3928387 -5.596549954 0.842976067 0.872860776 1.324925252 0.797388076 0.07220383 0.392327124 0.452285134 0.030036588 0.133326717 2.53E-06 5.596549954 0.452064475 MNSTGGQT(ph)PR ddPTM_A459_MK2206_30min_R2 1 MNSTGGQTPR 10 0 Q96ST2;Q96ST2-3;Q96ST2-2;A0A1B0GW95 Q96ST2 IWS1 Protein IWS1 homolog 1 MNST(0.001)GGQT(0.999)PR 104.59 0.030465 57410000 30369 31532 28114 41663 35840 40194 34732 35481 28412 34017 TRUE FALSE 32694.07399 29966.16673 29051.30673 38258.99963 34432.74152 41723.61084 30171.64668 40118.48852 30883.2244 32907.02808 0.993528614 0.910631208 0.882829852 1.162639164 1.046364364 1.267924005 0.916875465 1.219146513 0.938499348 1 15.00610812 -5.754731397 24.99985178 1.087694041 0.927160002 0.274762055 0.110841774 183.8390708 685138.2276 0.028063354 0.047230649 1.76E-06 5.754731397 -0.160534039 MNT(ph)GEKT(ph)T(ph)MRDLS(ph)QMLKK ddPTM_A459_MK2206_30min_R2 1 MNTGEKTTMRDLSQMLKK 18 3 A0A1B0GW76;A0A1B0GWF2;A0A1B0GVQ5;A0A2R8Y5D4;A0A0D9SG72;A0A1B0GTP9;P61764;P61764-2 A0A1B0GW76 STXBP1 Syntaxin-binding protein 1 4 MNT(1)GEKT(1)T(1)MRDLS(1)QMLKK 43.408 0.046367 0 910.96 1250.7 1281.5 2639.4 1177 445.4 796.69 1512.9 619.08 967.04 TRUE FALSE 980.703798 1188.592057 1324.22457 2423.752577 1130.785066 462.3500091 692.083646 1710.641225 672.9264594 935.485564 1.048336645 1.270561623 1.415547841 2.590903238 1.208768055 0.494235322 0.739812214 1.828613172 0.719333879 1 9.86957158 -6.513948408 24.74285939 0.978745096 1.591364289 0.256447963 0.500963397 573.1395888 1587975.819 0.169064234 0.17782298 3.06E-07 6.513948408 0.612619193 MNYMQNHQAGAPAPSLS(ph)R ddPTM_A459_MK2206_30min_R2 2 MNYMQNHQAGAPAPSLSR 18 0 Q9HCK8-2;Q9HCK8;H0YJG4;A0A2R8Y840 Q9HCK8-2 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 MNYMQNHQAGAPAPS(0.02)LS(0.98)R;MNYMQNHQAGAPAPS(0.135)LS(0.865)R 111.44 0.0008643 34409000 67216 99107 75207 108818 85133 91645 91558 67046 59705 66422 TRUE FALSE 72362.10864 94185.4905 77714.36384 99927.22131 81790.25066 95132.61469 79536.32462 75809.1424 64898.03298 64254.65558 1.126176897 1.465815817 1.209474444 1.555174803 1.272907775 1.480555982 1.237829756 1.179823341 1.01001293 1 15.97151337 -7.930845115 1.682422327 0.998461661 1.355139077 0.537775881 0.124508699 0.275338453 1.423361854 0.097834371 0.033967753 1.17E-08 7.930845115 0.356677417 MPCES(ph)SPPESADTPTSTR ddPTM_A459_MK2206_30min_R1 1 MPCESSPPESADTPTSTR 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MPCES(0.759)S(0.221)PPES(0.02)ADTPTSTR 270.79 4.87E-54 13600000 953.45 877.37 937.43 541.92 1091.3 798.96 858.46 716.16 905.4 612.51 TRUE FALSE 872.3540707 820.2530535 873.7998634 583.6587723 1047.83121 844.1964248 801.1936997 709.8986886 999.51957 688.392363 1.267233801 1.191548741 1.269334046 0.84785771 1.52214241 1.226330317 1.163861982 1.031241377 1.451962026 1 9.427087282 -10.97532429 3.065138988 0.995604286 1.210789818 0.114730985 0.181242691 125212444.3 165446122.5 4828175.598 0.044313446 1.06E-11 10.97532429 0.215185532 MPCESS(ph)PPESADTPTSTR ddPTM_A459_MK2206_30min_R1 1 MPCESSPPESADTPTSTR 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MPCES(0.017)S(0.982)PPES(0.001)ADTPTSTR 205.66 1.18E-29 0 522.8 579.19 637.13 265.3 464.98 698.42 359.58 595.06 601.28 310.39 TRUE FALSE 478.3331147 541.4846257 593.8833907 285.733452 446.458862 737.9639368 335.5930743 589.8574532 663.7852077 348.8434565 1.371197039 1.552228129 1.702435232 0.819087894 1.279825818 2.115458734 0.962016251 1.690894417 1.902816852 1 8.446435962 MPCESS(ph)PPESADTPTSTR ddPTM_A459_MK2206_30min_R2 2 MPCESSPPESADTPTSTR 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MPCES(0.027)S(0.971)PPES(0.002)ADTPTSTR;MPCES(0.035)S(0.89)PPES(0.075)ADTPTSTR 183.23 7.02E-10 20815000 19806.8 24850 16979.8 38104 22007 26626 39964 34927 23642 20066.4 TRUE FALSE 21323.22384 23615.98514 17545.89806 34990.78131 21142.8946 27639.27109 34716.67879 39492.07882 25698.33843 19411.63501 1.098476446 1.216589181 0.903885636 1.802567444 1.089186696 1.423850751 1.788446917 2.034454017 1.323862643 1 14.24463402 -5.979318203 0.914747167 1.57670553 1.07439892 0.152999881 0.336766905 1.02053666 1.715323311 0.150474197 0.349098573 1.05E-06 5.979318203 -0.50230661 MPCQSLQPEPINT(ph)PTHTK ddPTM_A459_MK2206_30min_R2 1 MPCQSLQPEPINTPTHTK 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MPCQSLQPEPINT(0.954)PT(0.041)HT(0.005)K 113.59 0.0015652 13126000 50340 53474 42065 54357 38568 35835 50615 44470 26563 46507 TRUE FALSE 54194.0691 50818.55892 43467.42611 49915.85922 37053.62653 37198.72604 43969.1897 50282.38169 28873.40173 44989.4804 1.204594243 1.129565367 0.966168663 1.109500683 0.823606457 0.826831644 0.977321572 1.117647531 0.641781178 1 15.45730008 -5.103360342 0.846538599 0.911175906 1.294263539 0.36769884 0.131008015 1.810673077 1.387598201 0.050039836 0.591259028 7.88E-06 5.103360342 0.383087633 MPCQSLQPEPINTPT(ph)HTK ddPTM_A459_MK2206_30min_R2 1 MPCQSLQPEPINTPTHTK 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MPCQSLQPEPINT(0.227)PT(0.692)HT(0.081)K 120.66 0.0012859 13067000 16647 16679 13308 19932 14926 17810 21606 14410 9802.7 15116 TRUE FALSE 17921.50712 15850.74511 13751.68208 18303.49184 14339.93024 18487.77203 18769.10625 16293.43648 10655.32113 14622.76616 1.225589394 1.0839772 0.940429597 1.251711998 0.980657838 1.264314278 1.283553744 1.114251319 0.728680266 1 13.83592863 -8.16455225 6.969115011 0.866610563 1.142611011 0.436297009 0.126953225 0.219568973 13.29360956 0.0865996 0.032216123 6.85E-09 8.16455225 0.276000449 MPDEPEEPVVAVS(ph)SPAVPPPTK ddPTM_A459_MK2206_30min_R1 1 MPDEPEEPVVAVSSPAVPPPTK 22 0 O60885;O60885-2;O60885-3;M0QZD9 O60885 BRD4 Bromodomain-containing protein 4 1 MPDEPEEPVVAVS(0.552)S(0.446)PAVPPPT(0.002)K 90.545 0.00026557 4030500 1407.4 1214.5 1402.4 1366.6 1353.1 1420.1 1511.3 1120 1443.2 1284 TRUE FALSE 1287.693239 1135.435829 1307.208995 1471.855769 1299.203162 1500.504835 1410.483935 1110.207958 1593.225805 1443.071614 0.892328023 0.786818768 0.905851784 1.01994645 0.900304011 1.039799287 0.977417836 0.769336703 1.104051794 1 10.49492718 -5.515519315 7.659005486 0.963391999 0.840883917 0.267293857 0.088073759 0.174011506 73.30024404 0.022646896 0.042866087 3.05E-06 5.515519315 -0.122508082 MPDEPEEPVVAVSS(ph)PAVPPPTK ddPTM_A459_MK2206_30min_R1 3 MPDEPEEPVVAVSSPAVPPPTK 22 0 O60885;O60885-2;O60885-3;M0QZD9 O60885 BRD4 Bromodomain-containing protein 4 1 MPDEPEEPVVAVS(0.175)S(0.824)PAVPPPTK;MPDEPEEPVVAVS(0.084)S(0.915)PAVPPPTK;MPDEPEEPVVAVS(0.134)S(0.866)PAVPPPTK 150.95 1.40E-07 33380000 9536.2 8737.1 9318.6 7875.1 8717.8 8155.6 8694.8 9066.5 7656.6 7312.5 TRUE FALSE 8725.096113 8168.313202 8686.079395 8481.641567 8370.551566 8617.363024 8114.785757 8987.232546 8452.530969 8218.427707 1.061650285 0.993902179 1.056902817 1.032027277 1.018510093 1.048541562 0.987389078 1.093546463 1.028485164 1 13.0046467 -8.549241486 23.03292988 0.999999998 1.035522307 0.116814414 0.030044591 6049.506251 5285400.821 0.027204131 0.007024077 2.82E-09 8.549241486 0.035522309 MPDEPEEPVVAVSS(ph)PAVPPPTK ddPTM_A459_MK2206_30min_R2 1 MPDEPEEPVVAVSSPAVPPPTK 22 0 O60885;O60885-2;O60885-3;M0QZD9 O60885 BRD4 Bromodomain-containing protein 4 1 MPDEPEEPVVAVS(0.179)S(0.821)PAVPPPTK 105.92 4.21E-05 5630700 124530 157810 134570 159250 146930 131950 148550 135770 129910 143920 TRUE FALSE 134064.1125 149973.3849 139056.4966 146238.7656 141160.7899 136971.4497 129045.2066 153515.6052 141209.337 139223.9022 0.962938909 1.077210037 0.99879758 1.050385482 1.013912035 0.983821367 0.92688974 1.102652653 1.014260732 1 17.08704739 -7.783030761 24.99997831 1.04384243 1.006384256 0.107888831 0.04694516 564.7269794 653869.7349 0.025371258 0.01220586 1.65E-08 7.783030761 -0.037458173 MPEANQLHLPNLNS(ph)QVDSPSSEKSPVMTPFK ddPTM_A459_MK2206_30min_R1 1 MPEANQLHLPNLNSQVDSPSSEKSPVMTPFK 31 1 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;H0Y8P3;G5EA03;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;E9PDJ9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 MPEANQLHLPNLNS(0.251)QVDS(0.102)PS(0.251)S(0.251)EKS(0.102)PVMT(0.043)PFK 44.844 0.018992 13581000 1384.5 1567.8 1321.5 1348.2 1314 1195.8 1143.4 1300.4 1072.1 1437.6 TRUE FALSE 1266.741005 1465.735935 1231.800262 1452.038598 1261.660598 1263.505163 1067.125872 1289.03074 1183.548632 1615.700741 0.784019573 0.907182808 0.762393821 0.898705163 0.780875174 0.782016824 0.660472478 0.79781528 0.732529609 1 10.65794429 -6.480353942 22.25386445 0.774426758 0.837878914 0.036537848 0.091285573 316.0972468 165417.3498 0.026500606 0.030043247 3.31E-07 6.480353942 0.063452156 MPEANQLHLPNLNS(ph)QVDSPSSEKSPVMTPFK ddPTM_A459_MK2206_30min_R2 1 MPEANQLHLPNLNSQVDSPSSEKSPVMTPFK 31 1 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;H0Y8P3;G5EA03;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;E9PDJ9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 MPEANQLHLPNLNS(0.234)QVDS(0.233)PS(0.233)S(0.233)EKS(0.061)PVMT(0.005)PFK 57.803 0.0015988 5683800 11544 12702 15607 15008 13528 7818.6 17402 11566 9005.2 12363 TRUE FALSE 12427.81752 12071.23715 16127.32959 13781.79839 12996.82275 8116.142302 15117.0965 13077.71591 9788.456018 11959.59632 1.039150251 1.009334832 1.348484443 1.152363175 1.086727545 0.678630121 1.264013942 1.093491416 0.818460402 1 13.54588107 -6.534437504 24.9672366 0.982591728 1.140306814 0.181185701 0.167929031 420.6903131 908696.1337 0.056581796 0.056626636 2.92E-07 6.534437504 0.157715087 MPEANQLHLPNLNSQVDSPS(ph)SEKSPVMTPFK ddPTM_A459_MK2206_30min_R1 3 MPEANQLHLPNLNSQVDSPSSEKSPVMTPFK 31 1 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;H0Y8P3;G5EA03;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;E9PDJ9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 MPEANQLHLPNLNS(0.004)QVDS(0.018)PS(0.448)S(0.311)EKS(0.217)PVMT(0.002)PFK;MPEANQLHLPNLNS(0.054)QVDS(0.054)PS(0.27)S(0.27)EKS(0.27)PVMT(0.081)PFK;MPEANQLHLPNLNS(0.136)QVDS(0.129)PS(0.335)S(0.335)EKS(0.044)PVMT(0.022)PFK 117.83 2.87E-16 97885000 7169.7 7517.1 7380.3 6218.7 5941.8 6135.3 6359.5 5615.8 6648.31 6549.91 TRUE FALSE 6559.879365 7027.735424 6879.345799 6697.665352 5705.125524 6482.675384 5935.269359 5566.701653 7339.425616 7361.3623 0.891123015 0.95467865 0.934520747 0.909840472 0.775009474 0.880635285 0.80627323 0.756205363 0.997020024 1 12.84575706 -6.020465256 23.69856225 0.853336081 0.928333952 0.080935867 0.079247679 692.5784038 802000.146 0.022220023 0.029094192 9.54E-07 6.020465256 0.074997871 MPEANQLHLPNLNSQVDSPS(ph)SEKSPVMTPFK ddPTM_A459_MK2206_30min_R2 2 MPEANQLHLPNLNSQVDSPSSEKSPVMTPFK 31 1 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;H0Y8P3;G5EA03;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;E9PDJ9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 MPEANQLHLPNLNS(0.019)QVDS(0.014)PS(0.421)S(0.312)EKS(0.233)PVMT(0.001)PFK;MPEANQLHLPNLNS(0.128)QVDS(0.079)PS(0.345)S(0.345)EKS(0.101)PVMT(0.001)PFK 100.27 1.10E-08 25830000 75770 83421 71141 74671 75939 58734 82963 67284 60056 75600 TRUE FALSE 81571.00946 79278.43445 73512.80543 68570.14044 72957.2533 60969.16353 72069.85844 76078.24982 65279.56232 73133.17819 1.115376242 1.084028295 1.005190903 0.937606462 0.997594459 0.833673102 0.985460501 1.04026998 0.892612135 1 16.15823844 -5.321376759 2.083984739 0.954600983 1.113911607 0.513185877 0.055886299 0.283503443 2.281998122 0.015835509 0.054419883 4.77E-06 5.321376759 0.159310624 MPEANQLHLPNLNSQVDSPSS(ph)EKSPVMTPFK ddPTM_A459_MK2206_30min_R2 1 MPEANQLHLPNLNSQVDSPSSEKSPVMTPFK 31 1 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;H0Y8P3;G5EA03;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;E9PDJ9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 MPEANQLHLPNLNS(0.132)QVDS(0.133)PS(0.133)S(0.436)EKS(0.14)PVMT(0.026)PFK 51.052 0.007609 4372000 15087 18424 18842 17814 17474 15671 21397 17058 18003 20584 TRUE FALSE 16242.07232 17509.09095 19470.18288 16358.53922 16787.88296 16267.37089 18587.5482 19287.53917 19568.8684 19912.34577 0.8156785 0.879308302 0.977794535 0.821527479 0.843089165 0.816948996 0.933468533 0.96862215 0.982750532 1 14.28137557 -7.520338148 3.452615756 0.980552964 0.86304122 0.605176885 0.045488218 0.186222902 4.713895173 0.024026728 0.01390753 3.02E-08 7.520338148 -0.117511744 MPEANQLHLPNLNSQVDSPSSEKS(ph)PVMTPFK ddPTM_A459_MK2206_30min_R1 1 MPEANQLHLPNLNSQVDSPSSEKSPVMTPFK 31 1 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;H0Y8P3;G5EA03;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;E9PDJ9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 MPEANQLHLPNLNS(0.177)QVDS(0.177)PS(0.177)S(0.177)EKS(0.222)PVMT(0.068)PFK 64.779 0.00024454 15752000 2937.4 2910.8 2878.5 2144 2391.9 2484.6 2429.5 1974 2431.5 2380.2 TRUE FALSE 2687.558705 2721.306391 2683.11544 2309.131251 2296.625558 2625.275905 2267.432488 1956.741526 2684.263126 2675.077146 1.004665869 1.017281462 1.003004883 0.863201742 0.858526851 0.981383251 0.847613868 0.731471064 1.003433912 1 11.38536478 -5.752327125 23.37173598 0.886495297 1.009213938 0.28275625 0.079091787 101.2046609 259569.945 0.021245005 0.036056589 1.77E-06 5.752327125 0.122718641 MPEMT(ph)ENETPTKK ddPTM_A459_MK2206_30min_R1 1 MPEMTENETPTKK 13 1 C9JBW0;Q68DE3 C9JBW0 KIAA2018 Basic helix-loop-helix domain-containing protein KIAA2018 1 MPEMT(0.998)ENET(0.002)PTKK 89.624 0.018786 0 1120.1 1380 1625.8 986.05 1394.7 1153.9 1422.7 1259.5 1294.1 1304.3 TRUE FALSE 1024.829613 1290.161749 1515.445226 1061.995742 1339.146146 1219.232821 1327.794279 1248.488324 1428.626326 1465.886531 0.699119333 0.880123885 1.033808002 0.724473361 0.913540112 0.831737515 0.905796084 0.851695065 0.974581795 1 10.51755772 -14.5228785 0.043585765 1.613427255 0.537010227 0.254159065 0.090085079 1163.179716 3.760216087 88.10067626 23.72592048 3.00E-15 14.5228785 -1.076417028 MPETVPQEEMPGPPLNSES(ph)GEEAPTGR ddPTM_A459_MK2206_30min_R1 2 MPETVPQEEMPGPPLNSESGEEAPTGR 27 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 MPETVPQEEMPGPPLNS(0.045)ES(0.955)GEEAPTGR;MPETVPQEEMPGPPLNS(0.034)ES(0.966)GEEAPT(0.001)GR 164.15 6.00E-18 22361000 1939.71 1513.8 1789.96 1615.05 2100.92 1927.62 1779.17 1859.26 1344.23 1322.8 TRUE FALSE 1774.727479 1415.251345 1668.462502 1739.441431 2017.235908 2036.760179 1660.484816 1843.004686 1483.967519 1486.678451 1.193753416 0.951955242 1.122275299 1.170018594 1.356874384 1.370007198 1.116909184 1.239679424 0.998176518 1 10.53787693 -3.90471681 15.00635678 1.163518531 1.144181723 0 0.137655254 0 0 0.032886333 0 0.000124533 3.90471681 -0.019336808 MPETVPQEEMPGPPLNSES(ph)GEEAPTGR ddPTM_A459_MK2206_30min_R2 1 MPETVPQEEMPGPPLNSESGEEAPTGR 27 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 MPETVPQEEMPGPPLNS(0.333)ES(0.666)GEEAPT(0.001)GR 114.18 8.35E-11 3197000 25206 34041 29685 38018 40662 37546 38173 32489 33392 36320 TRUE FALSE 27135.79074 32350.57344 30674.68308 34911.80779 39065.40557 38974.83934 33160.83925 36735.42385 36296.3758 35134.88137 0.77233193 0.92075374 0.873054978 0.993650937 1.111869574 1.109291901 0.943815318 1.04555423 1.033058157 1 15.10061641 -5.811536806 3.078510704 1.04249646 0.856552854 0.680219143 0.056883637 0.150054711 2.891246206 0.01701353 0.028526172 1.54E-06 5.811536806 -0.185943606 MPFLSIS(ph)SPK ddPTM_A459_MK2206_30min_R1 2 MPFLSISSPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPFLSIS(0.621)S(0.379)PK;MPFLS(0.23)IS(0.385)S(0.385)PK 123.75 0.0040563 50415000 8585.8 9368.9 9519.5 8175.6 6703 5891.6 6657 7787 7532.8 7458.6 TRUE FALSE 7855.532624 8758.982907 8873.342863 8805.286129 6436.005316 6225.177301 6212.923676 7718.91908 8315.861516 8382.627678 0.937120546 1.044897047 1.058539542 1.050420759 0.767778979 0.742628391 0.741166603 0.920823324 0.992035175 1 13.03318684 -6.250768018 24.69418819 0.844895786 1.026883603 0.409460837 0.094114649 592.3357588 1370700.621 0.029725695 0.037955381 5.61E-07 6.250768018 0.181987817 MPFLSIS(ph)SPK ddPTM_A459_MK2206_30min_R2 1 MPFLSISSPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPFLS(0.001)IS(0.499)S(0.499)PK 108.35 0.040722 5126900 47353 31989 34723 28751 33409 25944 36213 26153 26582 44293 TRUE FALSE 50978.38209 30400.47278 35880.64749 26401.95133 32097.19479 26931.3171 31458.1896 29571.2869 28894.05431 42847.72304 1.189757086 0.70950031 0.837399165 0.616180965 0.749099194 0.628535548 0.734185795 0.690148386 0.674342818 1 15.38693092 -4.760343524 24.99875784 0.724178898 1.189757639 0.614615217 0.10690447 16.29040517 371450.0275 0.024244006 0.144537251 1.74E-05 4.760343524 0.465578741 MPFLSISS(ph)PK ddPTM_A459_MK2206_30min_R1 1 MPFLSISSPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPFLSIS(0.016)S(0.984)PK 159.09 0.00046461 49729000 5328 5549.8 5411.3 4505.5 3342 2923.4 3419.7 3852.8 4174.7 4034.3 TRUE FALSE 4874.825622 5188.507011 5043.996033 4852.514391 3208.881063 3088.920382 3191.578053 3819.115376 4608.675004 4534.099541 1.075147464 1.144330195 1.11245816 1.0702267 0.707721794 0.681264351 0.703905599 0.842309557 1.01644769 1 12.14660035 -6.174808966 5.75677048 0.804641112 1.108998359 0.59508534 0.110605755 0.158202275 8.307149266 0.034594603 0.044906753 6.69E-07 6.174808966 0.304357246 MPFLSISS(ph)PK ddPTM_A459_MK2206_30min_R2 3 MPFLSISSPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPFLSIS(0.023)S(0.977)PK;MPFLSIS(0.019)S(0.981)PK;MPFLSIS(0.041)S(0.959)PK 160.91 0.00043418 31668600 235657 161870 203114 160589 181020 129840 199735 142915 138552 249271 TRUE FALSE 253699.0811 153831.7712 209885.7194 147468.365 173912.2452 134781.1522 173509.5546 161594.4812 150603.0025 241137.3077 1.052093861 0.637942642 0.870399199 0.611553502 0.721216667 0.558939442 0.719546702 0.670134716 0.62455289 1 17.87949535 -4.755262931 24.967042 0.699832728 1.052094451 0.392634665 0.125723032 190.0830226 768297.021 0.028772401 0.259981523 1.76E-05 4.755262931 0.352261723 MPFQTS(ph)PGGK ddPTM_A459_MK2206_30min_R2 2 MPFQTSPGGK 10 0 I6LM39;A0A087X1U4;P51608;P51608-2 I6LM39 MECP2 Methyl-CpG-binding protein 2 1 MPFQT(0.003)S(0.997)PGGK;MPFQT(0.006)S(0.994)PGGK 107.34 0.011348 10978200 82168 116984 95971 76208 72763 74633 81013 67818 72397 86819 TRUE FALSE 88458.84526 111174.7447 99170.62524 69981.56262 69905.95902 77473.21111 70375.89579 76682.04545 78693.9602 83986.10314 1.053255741 1.323727861 1.180798031 0.833251693 0.832351501 0.922452742 0.837946912 0.913032545 0.936987874 1 16.35786301 -5.752388249 23.48252782 0.88891056 1.199707582 0.736852049 0.079019059 40.63918094 105432.9407 0.020565786 0.034901481 1.77E-06 5.752388249 0.310797022 MPIEDS(ph)SPEKGR ddPTM_A459_MK2206_30min_R1 2 MPIEDSSPEKGR 12 1 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 MPIEDS(0.892)S(0.108)PEKGR;MPIEDS(0.743)S(0.257)PEKGR 135.94 0.0068767 23399800 5697.7 6993.8 6991.4 4948.8 5188 4730.2 5720.2 5482.7 6301 6594.8 TRUE FALSE 5213.080695 6538.502349 6516.843247 5329.957433 4981.350974 4998.019836 5338.615895 5434.765332 6956.011498 7411.813612 0.703347516 0.882173067 0.879250827 0.719116496 0.672082601 0.67433156 0.720284693 0.733257151 0.938503295 1 12.85561089 -8.359246462 3.776094044 0.99522178 0.749727117 0.610457583 0.071288397 0.174687063 4.270176845 0.077141707 0.020584784 4.37E-09 8.359246462 -0.245494663 MPIEDS(ph)SPEKGR ddPTM_A459_MK2206_30min_R2 1 MPIEDSSPEKGR 12 1 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 MPIEDS(0.5)S(0.5)PEKGR 67.846 0.03908 24955000 95686 86362 91806 77125 86359 55601 79500 66417 58318 92211 TRUE FALSE 103011.7937 82073.38866 94866.76622 70823.64079 82968.11174 57716.93502 69061.5545 75097.92994 63390.39423 89202.16262 1.154812739 0.920082947 1.063502985 0.793967755 0.930113232 0.647035154 0.774213903 0.841884633 0.710637415 1 16.44479107 -5.659741662 1.118772199 0.790657469 1.083552529 0.44855129 0.112762962 0.517600299 1.201191221 0.038453561 0.125624422 2.19E-06 5.659741662 0.292895061 MPIEDS(ph)SPEKGREEAASK ddPTM_A459_MK2206_30min_R1 1 MPIEDSSPEKGREEAASK 18 2 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 MPIEDS(0.5)S(0.5)PEKGREEAASK 70.907 0.025737 12646000 1382.7 1716.3 1936.7 1958.7 1618.7 1137 1131.1 1678.2 1576.3 805.06 TRUE FALSE 1265.094104 1604.568558 1805.2422 2109.559413 1554.223751 1201.375957 1055.646383 1663.527674 1740.162026 904.7969107 1.398207807 1.773401897 1.995190499 2.33152809 1.71775979 1.327785211 1.166721913 1.838564715 1.923262563 1 9.821450193 -6.528880506 18.34308571 1.489987719 1.894553776 0.25678242 0.337970829 9.272738579 28331.40756 0.116873475 0.117743876 2.96E-07 6.528880506 0.404566057 MPIEDSS(ph)PEK ddPTM_A459_MK2206_30min_R2 1 MPIEDSSPEK 10 0 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 MPIEDS(0.026)S(0.974)PEK 130.44 0.0037742 0 81144 57373 66883 51303 46838 42705 71350 56491 40819 72907 TRUE FALSE 87356.44703 54523.94025 69112.84584 47111.38079 44998.90478 44330.1687 61981.65929 63874.56766 44369.36284 70528.05056 1.238605723 0.773081629 0.979934158 0.66798076 0.638028478 0.628546633 0.878822806 0.905661891 0.629102357 1 16.10590954 -2.504623868 1.304674552 0.769538734 199.9772249 0.467551259 0.141035383 536.7940242 2.838867268 0.040637025 317999.3398 0.003128788 2.504623868 199.2076862 MPIVGLGT(ph)WK ddPTM_A459_MK2206_30min_R2 1 MPIVGLGTWK 10 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 MPIVGLGT(1)WK 123.67 0.0095429 3922000 29157 30906 26459 33133 25730 31152 34128 25747 22997 31623 TRUE FALSE 31389.28234 29371.25298 27341.12985 30425.92791 24719.71092 32337.51119 29646.9526 29112.2213 24997.23749 30591.1441 1.0260905 0.960122736 0.893759637 0.994599215 0.808067552 1.057087341 0.969135136 0.951655198 0.817139673 1 14.90082644 -4.817218269 3.710490622 0.937121139 1.032232411 0.114827887 0.074752153 0.536371508 12.6689214 0.018188801 0.131268277 1.52E-05 4.817218269 0.095111272 MPLDDLDREDEVR ddPTM_A459_MK2206_30min_R1 1 MPLDDLDREDEVR 13 1 P57740;P57740-2;P57740-3 P57740 NUP107 Nuclear pore complex protein Nup107 0 98.182 0.020449 0 1101.3 909.62 1078.7 712.82 930.26 887.46 1035.6 810.61 879.8 733.76 FALSE TRUE 1007.628652 850.4035727 1005.480849 767.7215199 893.2057743 937.7072183 966.5170136 803.5229222 971.2583584 824.6637284 1.221866098 1.031212534 1.219261639 0.930950997 1.083115146 1.137078285 1.172013489 0.974364331 1.177762917 1 9.687662144 -7.819753119 0.010606811 4.77E-07 2.161223355 0.086833004 0.095935009 2634.1098 27.79940065 2821.188153 2838.034494 1.51E-08 7.819753119 2.161222878 MPLDLS(ph)PLATPIIR ddPTM_A459_MK2206_30min_R1 2 MPLDLSPLATPIIR 14 0 B8ZZU6;E9PBF9;P15336-5;P15336;E9PEK8;H7C2N6;P15336-3;P15336-7;P15336-4;C9JCI8 B8ZZU6 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 MPLDLS(1)PLATPIIR;MPLDLS(0.992)PLAT(0.008)PIIR 135.86 0.00059989 27101000 3895.6 3972.7 4145.4 3507.5 3459.6 3558.5 4125.2 3446.4 3730.7 3488.4 TRUE FALSE 3564.258763 3714.076508 3864.021798 3777.648258 3321.796806 3759.979195 3850.015435 3416.268488 4118.519615 3920.569328 0.909117647 0.94733091 0.985576704 0.963545838 0.847274089 0.959039078 0.982004172 0.871370508 1.050490189 1 11.93684746 -8.27792327 24.9879328 1.025245107 0.936018253 0.4025586 0.044765591 962.98788 1459778.816 0.042490058 0.011101771 5.27E-09 8.27792327 -0.089226854 MPLDLS(ph)PLATPIIR ddPTM_A459_MK2206_30min_R2 2 MPLDLSPLATPIIR 14 0 B8ZZU6;E9PBF9;P15336-5;P15336;E9PEK8;H7C2N6;P15336-3;P15336-7;P15336-4;C9JCI8 B8ZZU6 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 MPLDLS(1)PLATPIIR;MPLDLS(1)PLATPIIR 199.33 8.32E-05 132195000 250630 240570 225440 240820 214995 235890 260100 180636 176095 220560 TRUE FALSE 269818.4255 228623.6436 232956.0571 221144.2357 206553.216 244866.9592 225948.5576 204245.7454 191411.4248 213363.1453 1.26459715 1.071523591 1.091828942 1.036468765 0.968082917 1.147653494 1.058985877 0.95726816 0.897115688 1 17.70295147 -1.522878745 0.545367689 1.001607769 11.29139851 0.574046526 0.065017918 108.9757685 1.012812425 0.034833212 1311.120507 0.03 1.522878745 10.28979074 MPLPS(ph)PTESR ddPTM_A459_MK2206_30min_R1 4 MPLPSPTESR 10 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 MPLPS(0.94)PT(0.06)ESR;MPLPS(0.943)PT(0.054)ES(0.002)R;MPLPS(0.984)PT(0.015)ESR;MPLPS(0.862)PT(0.107)ES(0.032)R 137.01 0.0017935 63112500 11824 10800.2 11253.5 9278.96 10902.3 11395 12479 9422.6 9424.08 10491.8 TRUE FALSE 10818.30671 10097.10502 10489.64377 9993.627107 10468.0383 12040.17505 11646.54868 9340.219202 10403.74684 11791.60339 0.917458496 0.856296186 0.889585871 0.847520628 0.887753595 1.021080395 0.987698474 0.792107646 0.882301286 1 13.52547229 -6.544895672 24.95207889 0.929900193 0.875858694 0.162452965 0.063973129 510.7296149 578812.6927 0.022661137 0.022662698 2.85E-07 6.544895672 -0.054041499 MPLPS(ph)PTESR ddPTM_A459_MK2206_30min_R2 4 MPLPSPTESR 10 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 MPLPS(0.84)PT(0.085)ES(0.076)R;MPLPS(0.949)PT(0.051)ESR;MPLPS(0.996)PT(0.004)ESR;MPLPS(0.982)PT(0.018)ESR 168.85 0.00025321 83490200 157304 179395 186935 196184 163433 183499 166484 151333 156753 148107 TRUE FALSE 169347.3152 170486.5052 193167.3196 180155.1396 157015.7992 190482.183 144624.4508 171112.7427 170387.0926 143274.2807 1.181979866 1.189930979 1.34823444 1.257414371 1.095910574 1.329493208 1.009423674 1.194301879 1.189237117 1 17.12842013 -9.887413942 0.231156955 0.89727141 1.257947541 0.33025189 0.09171792 12.36265644 0.911234103 1.1635966 0.205584819 1.30E-10 9.887413942 0.360676132 MPNGLDGMSLS(ph)PPGAR ddPTM_A459_MK2206_30min_R2 2 MPNGLDGMSLSPPGAR 16 0 C9JLZ4;Q53TQ3 C9JLZ4 INO80D INO80 complex subunit D 1 MPNGLDGMS(0.029)LS(0.971)PPGAR;MPNGLDGMS(0.464)LS(0.536)PPGAR 133.9 0.00049703 4430000 17671.1 20815 19355.4 21694.7 22594 23106 19723.8 15622.2 16005.4 18634.5 TRUE FALSE 19024.013 19781.35737 20000.69938 19922.17361 21706.84603 23985.31502 17134.04137 17664.07518 17397.52076 18026.45779 1.055338393 1.097351326 1.109519108 1.105162969 1.204165915 1.330561739 0.950494077 0.979897181 0.965110337 1 14.13782831 -7.319489642 24.9999641 0.972199986 1.146477622 0.587719966 0.072360932 216.3435986 93169.79677 0.032818463 0.022126208 4.79E-08 7.319489642 0.174277636 MPPLIADS(ph)PK ddPTM_A459_MK2206_30min_R1 1 MPPLIADSPK 10 0 A0A087WXX9;P54646 A0A087WXX9 PRKAA2 5-AMP-activated protein kinase catalytic subunit alpha-2 1 MPPLIADS(1)PK 113.61 0.0075235 9995000 3163 4046.8 4535.3 3977.8 3576.1 3760.4 4819.9 5463.9 6658.3 7071.4 TRUE FALSE 2893.97024 3783.352584 4227.456472 4284.170845 3433.656364 3973.310598 4498.373265 5416.129698 7350.454112 7947.458418 0.364137827 0.476045597 0.531925585 0.53906175 0.432044584 0.499947328 0.566014067 0.681492046 0.924881103 1 12.95627785 -8.090528607 1.357672551 1.008875531 0.47670866 0.940288415 0.048311702 0.096100037 0.321878508 0.04625781 0.015150081 8.12E-09 8.090528607 -0.532166871 down MPQSMPEY(ph)ALT(ph)RNY(ph)LELMVELPWNK ddPTM_A459_MK2206_30min_R1 1 MPQSMPEYALTRNYLELMVELPWNK 25 1 H3BQ67;E7EN44;Q86WA8-2;Q86WA8 H3BQ67 LONP2 "Lon protease homolog 2, peroxisomal" 3 MPQS(0.042)MPEY(0.958)ALT(1)RNY(1)LELMVELPWNK 47.288 0.030143 20249000 412.44 517.31 522.21 412.18 394.74 560.29 476.37 283.76 347.66 346.94 TRUE FALSE 377.3598122 483.633025 486.7638402 443.926175 379.0166699 592.0131356 444.5922265 281.2791162 383.8005011 389.9215465 0.967783944 1.240334189 1.248363535 1.138501268 0.972033152 1.518287822 1.140209436 0.721373617 0.984301854 1 8.607040068 -7.631123141 7.437888989 0.891730691 1.187620353 0.374653043 0.162043488 0.225415154 14.03530121 0.07577107 0.043434938 2.34E-08 7.631123141 0.295889662 MPRQFAPQSLY(ph)NMMGEAYMR ddPTM_A459_MK2206_30min_R2 1 MPRQFAPQSLYNMMGEAYMR 20 1 A0A0B4J253;Q8N394 A0A0B4J253 TMTC2 Transmembrane and TPR repeat-containing protein 2 1 MPRQFAPQS(0.002)LY(0.941)NMMGEAY(0.058)MR 45.876 0.045261 5524100 40677 53268 45740 31808 47847 35447 55568 35181 44587 49044 TRUE FALSE 43791.2624 50622.78858 47264.94877 29209.18465 45968.28637 36795.96042 48271.85485 39779.27749 48465.09667 47443.6983 0.923015363 1.067007641 0.996232386 0.615659944 0.968901836 0.775571082 1.017455565 0.83845229 1.021528641 1 15.53392885 -9.946526876 11.53194893 0.999969935 0.910316323 0.037405273 0.130198835 0 0 0.12494841 0.030304441 1.13E-10 9.946526876 -0.089653612 MPS(ph)FGVSAPGK ddPTM_A459_MK2206_30min_R1 1 MPSFGVSAPGK 11 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 MPS(0.985)FGVS(0.015)APGK 90.793 0.027327 13269000 3020.1 2474.9 2386.8 2513.5 2788.4 2154.7 2306.9 2215.5 2271.2 2102.3 TRUE FALSE 2763.224636 2313.78356 2224.790666 2707.090206 2677.332123 2276.697252 2153.01091 2196.130117 2507.299368 2362.748796 1.169495734 0.979276157 0.941611173 1.14573763 1.133142943 0.963579902 0.911231407 0.929481002 1.061178985 1 11.20625054 -6.790146905 24.18886858 0.964820291 1.065245317 0.293854552 0.076992296 206.9730044 174392.8559 0.028563773 0.025196434 1.62E-07 6.790146905 0.100425026 MPS(ph)FGVSAPGK ddPTM_A459_MK2206_30min_R2 1 MPSFGVSAPGK 11 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 MPS(0.993)FGVS(0.007)APGK 130.69 0.0023466 17845000 53677 75474 52917 60602 37261 34560 36496 38613 44409 33707 TRUE FALSE 57786.55239 71726.07091 54681.22637 55650.62274 35797.94592 35875.20502 31704.03136 43659.85168 48271.61455 32607.14335 1.772205304 2.199704222 1.676970772 1.706700343 1.097855937 1.100225329 0.972303247 1.338965858 1.480399986 1 14.99290043 -6.021786221 1.990994917 1.166378942 1.940692508 0.746572092 0.193090541 0.165092411 1.309988509 0.063978699 0.100102537 9.51E-07 6.021786221 0.774313566 MPS(ph)LEISAPK ddPTM_A459_MK2206_30min_R1 1 MPSLEISAPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPS(1)LEISAPK 128.08 0.0031782 23952000 2810.2 2435.8 2515 2501 2421.3 2517.7 2107.8 2335.8 1686.1 1914.7 TRUE FALSE 2571.177733 2277.228977 2344.288807 2693.627453 2324.854494 2660.249998 1967.192508 2315.378347 1861.376129 2151.907491 1.194836555 1.058237395 1.089400365 1.251739429 1.080369162 1.236228792 0.91416221 1.075965559 0.864988916 1 11.07140034 -7.268298496 24.9932097 0.970109631 1.146008248 0.572064016 0.079497863 419.7282122 1529396.882 0.03125879 0.021603123 5.39E-08 7.268298496 0.175898617 MPS(ph)LEISAPK ddPTM_A459_MK2206_30min_R2 2 MPSLEISAPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPS(1)LEISAPK;MPS(1)LEISAPK 147.26 0.00083152 20451500 151066 150765 160913 144516 163567 137799 168419 111688 145555 141934 TRUE FALSE 162631.7291 143278.2293 166277.7591 132708.5805 157144.5377 143043.0375 146305.383 126286.0051 158215.1108 137302.7052 1.184475782 1.043520804 1.211030466 0.966540174 1.144511592 1.04180786 1.065568102 0.919763415 1.152308766 1 17.06700052 -1.522878767 0.221974443 1.009698607 1.790093925 0.189532693 0.082962902 82.72615154 1.062790269 0.119827085 23.19048802 0.029999999 1.522878767 0.780395318 MPSARPPS(ph)PPLSSWER ddPTM_A459_MK2206_30min_R1 2 MPSARPPSPPLSSWER 16 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 MPS(0.002)ARPPS(0.984)PPLS(0.007)S(0.007)WER;MPSARPPS(0.957)PPLS(0.009)S(0.034)WER 125.86 0.0055527 139158000 3968 3824.3 4043.9 3493.2 3909.5 3980.4 3778 3948.7 3568.2 3085.57 TRUE FALSE 3630.500763 3575.337375 3769.411335 3762.246869 3753.776336 4205.766808 3525.976513 3914.176932 3939.127159 3467.833706 1.046907398 1.031000237 1.08696427 1.084898293 1.082455693 1.212793682 1.016766319 1.128709524 1.135904283 1 11.759819 -5.440929609 1.786430117 1.102283258 1.036107161 0.11506026 0.057248739 0.738791926 4.424225022 0.016314016 0.052026982 3.62E-06 5.440929609 -0.066176096 MPSARPPS(ph)PPLSSWER ddPTM_A459_MK2206_30min_R2 1 MPSARPPSPPLSSWER 16 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 MPSARPPS(0.86)PPLS(0.102)S(0.038)WER 65.085 0.031155 35577000 18950 34168 27650 29938 31723 31605 35651 29362 28954 34191 TRUE FALSE 20400.82657 32471.2668 28571.8372 27491.96963 30477.39562 32807.75042 30969.98088 33199.71421 31472.36658 33075.35047 0.6167985 0.981736137 0.8638408 0.831192088 0.921453445 0.991909381 0.936346265 1.003760013 0.951535392 1 15.01346882 -4.756591798 24.99943393 0.937306964 0.616798012 0.757858448 0.055149046 79.41599472 409507.9754 0.014832523 0.118502187 1.75E-05 4.756591798 -0.320508952 MPSASASRKSQEKPR ddPTM_A459_MK2206_30min_R1 1 MPSASASRKSQEKPR 15 3 P14868 P14868 DARS "Aspartate--tRNA ligase, cytoplasmic" 0 71.221 0.046603 0 2458.3 2194.3 1959.4 2235.2 2176.1 2291.6 2461.5 2106.9 2232 2241.1 FALSE TRUE 2249.208676 2051.450671 1826.401387 2407.355491 2089.421329 2421.348412 2297.297826 2088.479595 2464.024387 2518.744387 0.892988065 0.814473545 0.725123755 0.955776022 0.829548778 0.961331536 0.912080574 0.829174888 0.978274889 1 11.298489 -7.687669428 0.216688707 1.028532372 0.784435664 0.33614716 0.068191045 3.135947077 0.661351108 0.253523321 0.309682042 2.05E-08 7.687669428 -0.244096708 MPSFGMLS(ph)PGK ddPTM_A459_MK2206_30min_R1 2 MPSFGMLSPGK 11 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 MPS(0.012)FGMLS(0.988)PGK;MPS(0.001)FGMLS(0.999)PGK 137.84 0.0013004 77680000 7911.7 8775 7692.4 6365.6 6125.6 5287.3 6518.7 6979.5 7912.1 7198.3 TRUE FALSE 7238.768369 8203.745905 7170.26132 6855.879615 5881.604381 5586.662357 6083.849417 6918.478967 8734.591109 8090.079748 0.894770953 1.014050066 0.886302922 0.847442773 0.727014388 0.690557143 0.752013528 0.855180565 1.079666874 1 12.98193821 -10.69223624 9.481512625 1.000000002 0.853339971 0.113308042 0.11515915 5.21E-09 4.82E-10 0.122645405 0.029745879 2.03E-11 10.69223624 -0.146660031 MPSFGMLS(ph)PGK ddPTM_A459_MK2206_30min_R2 1 MPSFGMLSPGK 11 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 MPSFGMLS(1)PGK 101.38 0.015331 16426000 107800 95576 106270 88466 109430 73481 114340 78733 91174 118860 TRUE FALSE 116053.2509 90829.83482 109812.9888 81238.04481 105133.2284 76277.37095 99327.02065 89023.67343 99104.14972 114981.6079 1.009320125 0.789950988 0.955048296 0.706530777 0.914348218 0.663387583 0.86385138 0.774242725 0.861913062 1 16.81104359 -4.754267157 24.98923144 0.827038375 1.009320444 0.203388773 0.100976849 363.0534634 1264830.507 0.022880919 0.227170754 1.76E-05 4.754267157 0.182282069 MPTQSEEEKLSPSPT(ph)TEDPR ddPTM_A459_MK2206_30min_R1 1 MPTQSEEEKLSPSPTTEDPR 20 1 F6RRE2;E7EV10;Q9BTC8;E7EQY4;Q9BTC8-2 F6RRE2 MTA3 Metastasis-associated protein MTA3 1 MPTQSEEEKLS(0.008)PS(0.202)PT(0.395)T(0.395)EDPR 70.335 0.015329 17485000 2804.4 2869.1 3137.3 2633.1 1724 2279.5 1967.1 2444.4 2424 2190.5 TRUE FALSE 2565.871054 2682.321069 2924.348817 2835.901818 1655.329429 2408.56332 1835.878348 2423.028869 2675.983474 2461.875677 1.042242335 1.089543673 1.187853978 1.151927307 0.672385468 0.978344821 0.745723419 0.984220646 1.086969378 1 11.26554219 -6.201455158 24.99971735 0.905560103 1.120864452 0.412083222 0.120766941 245.4769534 102307.4326 0.03570437 0.046094135 6.29E-07 6.201455158 0.215304349 MPTQSEEEKLSPSPT(ph)TEDPR ddPTM_A459_MK2206_30min_R2 1 MPTQSEEEKLSPSPTTEDPR 20 1 F6RRE2;E7EV10;Q9BTC8;E7EQY4;Q9BTC8-2 F6RRE2 MTA3 Metastasis-associated protein MTA3 1 MPTQSEEEKLS(0.001)PS(0.344)PT(0.57)T(0.084)EDPR 104.76 0.00070947 18508000 51167 56000 46042 55538 55204 34007 61159 45342 37600 63563 TRUE FALSE 55084.38486 53219.12143 47577.0173 51000.36774 53036.41358 35301.16021 53128.74983 51268.35508 40870.38003 61488.94452 0.895842095 0.865507155 0.77374913 0.829423373 0.862535762 0.574105809 0.864037434 0.833781674 0.66467851 1 15.90803942 -5.126352193 3.836685713 0.791857554 0.890515125 0.07708956 0.109890486 0.54657408 13.75525886 0.027301172 0.086949679 7.48E-06 5.126352193 0.098657571 MPVKDT(ph)T(ph)Y(ph)RVKGLT(ph)NK ddPTM_A459_MK2206_30min_R2 1 MPVKDTTYRVKGLTNK 16 3 A0A0A0MTS7;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12;A0A0A0MRA3;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9 A0A0A0MTS7 TTN Titin 4 MPVKDT(1)T(1)Y(1)RVKGLT(1)NK 40.983 0.045994 3435600 7359.4 9437.3 10022 10971 10723 11460 11770 8665.9 10731 9288.7 TRUE FALSE 7922.841322 8968.657405 10356.12848 10074.63421 10301.96114 11896.11833 10224.58486 9798.562884 11664.36298 8985.61048 0.881725436 0.998113309 1.152523638 1.121196409 1.146495407 1.323907636 1.137884275 1.090472696 1.298115805 1 13.13340081 -4.926004557 1.357492522 1.172060242 0.798291423 0.509108995 0.08918797 0.77016632 1.544961034 0.025665468 0.370438524 1.19E-05 4.926004557 -0.373768819 MPY(ph)NY(ph)LLDAKS(ph)RRAHNIDLK ddPTM_A459_MK2206_30min_R2 1 MPYNYLLDAKSRRAHNIDLK 20 3 Q9NZ71-9 Q9NZ71-9 RTEL1 Regulator of telomere elongation helicase 1 3 MPY(1)NY(1)LLDAKS(1)RRAHNIDLK 52.731 0.042046 0 942.11 2144.8 2110.9 767.35 966.02 787.12 1122.5 662.08 544.17 1033.4 TRUE FALSE 1014.238666 2038.292351 2181.276352 704.6550504 928.0892009 817.0744032 975.1144016 748.6161293 591.500923 999.6802426 1.01456308 2.038944318 2.181974055 0.704880441 0.928386059 0.817335752 0.975426301 0.748855581 0.59169012 1 9.965322899 -5.77232736 24.99994819 0.823738482 1.774538886 0.651522652 0.308565769 119.1102465 273489.6934 0.086516835 0.129746852 1.69E-06 5.77232736 0.950800404 MQAHIQDLEEQLDEEEGAR ddPTM_A459_MK2206_30min_R1 2 MQAHIQDLEEQLDEEEGAR 19 0 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 0 ; 152.9 0.00029212 5125900 2003.76 2325.1 1689.8 1547.21 1987.14 1802.91 1705.32 1703.02 1719.22 1403.48 FALSE TRUE 1833.32969 2173.735567 1575.101084 1666.376382 1907.988006 1904.989206 1591.561214 1688.130676 1897.939071 1577.353698 1.162281923 1.378090133 0.998571903 1.056437998 1.209613296 1.207712137 1.009007185 1.070229637 1.203242541 1 10.62329048 -1.522878745 0.324798831 1.082500159 2.708650893 0.143099358 0.10879386 112.8820387 1.609499225 0.102966211 109.5926396 0.03 1.522878745 1.626150734 MQAS(ph)IEK ddPTM_A459_MK2206_30min_R1 5 MQASIEK 7 0 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK 103.26 0.018752 556755000 26209.3 30725.6 26800.4 25502.4 26300.2 23493.8 29788.8 26839.5 26872 24539.1 TRUE FALSE 23980.0614 28725.35786 24981.26352 27466.59927 25252.60734 24823.99865 27801.6435 26604.84508 29665.44056 27579.18897 0.869498426 1.041559195 0.905801238 0.995917585 0.915639955 0.900098936 1.008066029 0.964671046 1.075645865 1 14.75129241 -7.79023947 1.763049441 1.029750236 0.944786325 0.297210586 0.053901622 0.470984909 2.792042142 0.038861264 0.015131095 1.62E-08 7.79023947 -0.084963911 MQAS(ph)IEK ddPTM_A459_MK2206_30min_R2 6 MQASIEK 7 0 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK 103.26 0.018752 1058350800 2179468 2281669 2015028 2208623 2196575 1604343 2543476 1780305 1577868 2425325 TRUE FALSE 2346329.746 2168364.635 2082208.028 2028171.436 2110326.429 1665397.397 2209514.546 2012996.976 1715108.107 2346186.844 1.000060908 0.924207993 0.887486022 0.864454355 0.899470745 0.70983153 0.941747053 0.857986644 0.731019403 1 21.16188648 -4.543752781 0.871498285 0.848045769 1.141263802 0.223809851 0.08211393 4.636566143 2.074799894 0.027881337 1.434093734 2.86E-05 4.543752781 0.293218032 MQDTMEENS(ph)ESALRK ddPTM_A459_MK2206_30min_R2 1 MQDTMEENSESALRK 15 1 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-2;P17706-4;P17706 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 MQDT(0.006)MEENS(0.969)ES(0.025)ALRK 48.704 0.047984 6207900 1151.7 7549.6 4355 10471 9250.3 19873 6148.4 4935.2 12391 3916.8 TRUE FALSE 1239.875038 7174.697842 4500.193526 9615.485805 8887.086743 20629.28094 5341.107694 5580.247585 13468.74678 3788.995137 0.32723057 1.893562167 1.187701056 2.53774034 2.345499644 5.444525579 1.409636989 1.472751319 3.554701523 1 11.88759957 -5.776524364 5.392812651 2.631303875 1.201358368 0.206414053 1.248711829 0.277098977 23.67553074 0.354333521 0.565422816 1.67E-06 5.776524364 -1.429945507 MQDY(ph)NKDDMSYRR ddPTM_A459_MK2206_30min_R1 1 MQDYNKDDMSYRR 13 2 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;E9PRE3;E9PRJ0;Q8WWI1-3;E9PMP7;E9PK58;E9PLU6 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 MQDY(1)NKDDMSYRR 74.165 0.033204 203790000 4519.1 956.57 761.11 756.66 7407.7 6841.6 6613.4 3873.5 918.89 1019.1 TRUE FALSE 4134.726814 894.2971191 709.4479738 814.9380843 7112.635623 7228.96548 6172.232153 3839.634398 1014.411904 1145.353802 3.609999642 0.780804253 0.61941382 0.711516462 6.209989971 6.311556716 5.388930602 3.352356618 0.88567559 1 10.1615776 -4.479125944 22.65216627 2.993097139 9.653869398 0.005190266 2.266661494 3185.305447 1718756.948 0.613868294 42391.78834 3.32E-05 4.479125944 6.660772259 MQEAMTQEVSDVFSDTT(ph)TPIK ddPTM_A459_MK2206_30min_R1 2 MQEAMTQEVSDVFSDTTTPIK 21 0 P18206;P18206-2 P18206 VCL Vinculin 1 MQEAMTQEVSDVFSDT(0.02)T(0.818)T(0.162)PIK;MQEAMTQEVSDVFS(0.002)DT(0.003)T(0.497)T(0.497)PIK 172.32 8.29E-12 3963300 2842.3 3201.12 2937.58 2298.92 2582.84 2296.97 2944.41 2471.8 2747.28 2602.21 TRUE FALSE 2600.547459 2992.726506 2738.185254 2475.983217 2479.960014 2427.022456 2747.993781 2450.189313 3032.869587 2924.59142 0.889200263 1.023297301 0.936262493 0.846608247 0.847968026 0.829867187 0.939616304 0.837788587 1.037023348 1 11.51401937 -8.273064487 24.98024529 1.018511698 0.895848159 0.429749975 0.05741367 867.3672645 1863794.646 0.057715025 0.015407363 5.33E-09 8.273064487 -0.122663539 MQEAMTQEVSDVFSDTT(ph)TPIK ddPTM_A459_MK2206_30min_R2 1 MQEAMTQEVSDVFSDTTTPIK 21 0 P18206;P18206-2 P18206 VCL Vinculin 1 MQEAMTQEVSDVFS(0.029)DT(0.108)T(0.432)T(0.432)PIK 69.255 0.042941 0 3903.5 4751.1 4248.1 5840.9 4973.9 3918.5 5594 3745.5 4244.7 4233 TRUE FALSE 4202.354961 4515.167283 4389.729534 5363.679786 4778.599694 4067.621263 4859.50108 4235.04971 4613.896333 4094.877557 1.026246793 1.102637923 1.072005078 1.309851079 1.166970105 0.993343807 1.186726834 1.034231098 1.126748302 1 11.9996046 -9.130855087 0.594146109 0.996794827 1.124236959 0.128508203 0.087899158 4.605801856 2.602104092 0.135827248 0.038754085 7.40E-10 9.130855087 0.127442133 MQEAMTQEVSDVFSDTTT(ph)PIK ddPTM_A459_MK2206_30min_R1 2 MQEAMTQEVSDVFSDTTTPIK 21 0 P18206;P18206-2 P18206 VCL Vinculin 1 MQEAMTQEVSDVFSDT(0.001)T(0.248)T(0.751)PIK;MQEAMTQEVSDVFS(0.043)DT(0.195)T(0.195)T(0.566)PIK 175.99 6.76E-14 4037300 4096.47 4137.2 3502.9 3819.84 3365.93 3303.63 3880.17 3759.38 3747.3 3513.88 TRUE FALSE 3748.043715 3867.867528 3265.132908 4114.044739 3231.857881 3490.678676 3621.330939 3726.512137 4136.845245 3949.205983 0.949062604 0.979403846 0.826782123 1.041739721 0.818356372 0.883893798 0.916976971 0.943610476 1.047513162 1 11.9473469 -8.112012579 3.982241334 1.02261015 0.915987607 0.303517452 0.063801695 0.285000007 7.577510549 0.046446949 0.016106113 7.73E-09 8.112012579 -0.106622543 MQEAMTQEVSDVFSDTTT(ph)PIK ddPTM_A459_MK2206_30min_R2 1 MQEAMTQEVSDVFSDTTTPIK 21 0 P18206;P18206-2 P18206 VCL Vinculin 1 MQEAMTQEVSDVFS(0.002)DT(0.009)T(0.215)T(0.774)PIK 102.69 0.0010874 0 4391.7 4056.6 2702.5 4256.3 3578 3651.8 3583.9 3718.8 4517.1 4082.3 TRUE FALSE 4727.931929 3855.155143 2792.600001 3908.546675 3437.509742 3790.771808 3113.329625 4204.859929 4909.989193 3949.094885 1.197219126 0.976212336 0.70714938 0.989732277 0.87045509 0.959909022 0.788365364 1.064765484 1.243320137 1 11.94730632 -7.971558312 11.40577383 1.132465459 0.922212846 0.268708049 0.134613114 0.712157644 283.1193647 0.073198199 0.03500603 1.07E-08 7.971558312 -0.210252614 MQEMLQRMKQQMQDQ ddPTM_A459_MK2206_30min_R1 1 MQEMLQRMKQQMQDQ 15 2 B4DJ62;G3XAH0;Q99719 B4DJ62 Sep-05 Septin-5 0 46.797 0.039064 7964000 2468 2790.6 2473.4 2235.2 1990.8 2031.1 2628 2319.7 2262.7 2182.1 FALSE TRUE 2258.08364 2608.931433 2305.512499 2407.355491 1911.50222 2146.099127 2452.690915 2299.419107 2497.915762 2452.435022 0.920751669 1.063812663 0.940091166 0.981618461 0.779430323 0.875089088 1.000104342 0.937606537 1.018545136 1 11.2599992 -10.1441542 11.81327649 0.999999997 0.944967669 0.043310894 0.075412943 0 0 0.076689818 0.018600013 7.18E-11 10.1441542 -0.055032328 MQES(ph)PKLPQQSYNFDPDTCDESVDPFK ddPTM_A459_MK2206_30min_R1 1 MQESPKLPQQSYNFDPDTCDESVDPFK 27 1 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 MQES(0.98)PKLPQQS(0.007)Y(0.007)NFDPDT(0.001)CDES(0.005)VDPFK 51.125 0.010915 4650300 1963.3 2461.9 2204.4 1484.3 1116.9 895.4 1059 1158.9 1175.9 1098.5 TRUE FALSE 1796.311025 2301.629863 2054.77147 1598.621043 1072.411508 946.0967742 988.3560423 1148.767859 1298.139013 1234.590473 1.454985329 1.864286103 1.664334461 1.294859371 0.86863744 0.766324376 0.800553757 0.930484954 1.051473376 1 10.26981685 -6.003167915 2.578995787 0.887083371 1.685353413 0.883229319 0.123859403 0.085968954 1.150702168 0.039356557 0.059371205 9.93E-07 6.003167915 0.798270041 MQHLIAR ddPTM_A459_MK2206_30min_R1 2 MQHLIAR 7 0 P14618;P14618-3;B4DNK4;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 118.69 0.01502 65377000 13450.6 14545.3 14647.8 12033.5 15270.2 15224.1 16455.3 16074.2 12831.9 12982.9 FALSE TRUE 12306.55584 13598.39833 13653.54815 12960.32226 14661.9556 16086.07539 15357.59696 15933.66496 14165.82192 14591.31967 0.843416231 0.931951231 0.935730863 0.888221391 1.004840956 1.102441434 1.052515969 1.091996154 0.970838981 1 13.83282275 -6.401418067 3.936702872 1.05031106 0.904985494 0.703368281 0.043975446 0.127976424 3.439714583 0.013820779 0.015685348 3.97E-07 6.401418067 -0.145325566 MQHLIAR ddPTM_A459_MK2206_30min_R2 2 MQHLIAR 7 0 P14618;P14618-3;B4DNK4;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 128.38 0.0070453 49629000 101440 134024 129722 139214 133763 140257 137976 114225 125208 133789 FALSE TRUE 109206.3244 127368.563 134046.8667 127839.7709 128510.7925 145594.5784 119859.5855 129154.5997 136098.3655 129423.4759 0.843790693 0.984122565 1.035722969 0.987763387 0.992948085 1.124947212 0.926103898 0.997922508 1.051574025 1 16.9817398 -4.770120208 3.396528144 1.013573534 0.819471624 0.52509258 0.048515328 0.252467396 4.598508654 0.012079355 0.130684014 1.70E-05 4.770120208 -0.194101909 MQNGFGSPEPSLPGT(ph)PHSPAPPSGGTWK ddPTM_A459_MK2206_30min_R2 1 MQNGFGSPEPSLPGTPHSPAPPSGGTWK 28 0 Q8N1G0;Q8N1G0-2;F8WCX2 Q8N1G0 ZNF687 Zinc finger protein 687 1 MQNGFGSPEPSLPGT(0.894)PHS(0.106)PAPPSGGTWK 120.66 5.40E-12 6584100 33872 43861 38192 47295 44017 43858 48072 33263 37516 38807 TRUE FALSE 36465.26636 41682.92652 39465.30222 43430.84721 42288.67141 45527.04692 41760.08866 37610.58831 40779.07387 37540.73077 0.971352065 1.110338709 1.051266222 1.156899355 1.12647438 1.212737365 1.112394133 1.001860847 1.086262122 1 15.19616911 -10.9419451 7.391334194 0.999995125 1.095903724 0.142592734 0.067251825 5.64E-06 4.43E-07 0.067993785 0.016490077 1.14E-11 10.9419451 0.095908599 MQNGFGSPEPSLPGTPHS(ph)PAPPSGGTWK ddPTM_A459_MK2206_30min_R1 1 MQNGFGSPEPSLPGTPHSPAPPSGGTWK 28 0 Q8N1G0;Q8N1G0-2;F8WCX2 Q8N1G0 ZNF687 Zinc finger protein 687 1 MQNGFGSPEPS(0.002)LPGT(0.039)PHS(0.94)PAPPS(0.014)GGT(0.005)WK 63.967 0.000744 9160500 1611.8 1964.6 2171.1 2202.5 1898.5 1428.2 1758.8 1807.2 1211.2 1085.5 TRUE FALSE 1474.707946 1836.704183 2023.731781 2372.136932 1822.878725 1509.06345 1641.473661 1791.399841 1337.108574 1219.979935 1.208796886 1.505519993 1.658823824 1.944406513 1.494187464 1.236957598 1.345492343 1.468384675 1.09600866 1 10.2526417 -6.650061262 4.720666859 1.266716353 1.594692847 0.38676108 0.208132957 0.253788946 9.404848557 0.073305585 0.072829789 2.24E-07 6.650061262 0.327976493 MQNGFGSPEPSLPGTPHS(ph)PAPPSGGTWK ddPTM_A459_MK2206_30min_R2 1 MQNGFGSPEPSLPGTPHSPAPPSGGTWK 28 0 Q8N1G0;Q8N1G0-2;F8WCX2 Q8N1G0 ZNF687 Zinc finger protein 687 1 MQNGFGSPEPSLPGT(0.026)PHS(0.956)PAPPS(0.007)GGT(0.01)WK 64.701 0.00068251 8114700 16825 17438 19312 20519 23116 24394 21702 18195 18860 19878 TRUE FALSE 18113.13494 16572.05428 19955.85244 18842.53206 22208.34969 25322.33076 18852.50133 20573.14897 20500.40871 19229.38249 0.941950941 0.861808968 1.037779162 0.979882327 1.154917466 1.316856159 0.980400767 1.069880896 1.06609813 1 14.23102481 -5.671996797 1.662627579 1.101119341 0.905893856 0.349489851 0.095960535 0.423370231 2.344260737 0.031314624 0.075383863 2.13E-06 5.671996797 -0.195225485 MQNNSSPS(ph)ISPNTSFTSDGSPSPLGGIK ddPTM_A459_MK2206_30min_R1 1 MQNNSSPSISPNTSFTSDGSPSPLGGIK 28 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNS(0.027)S(0.105)PS(0.432)IS(0.432)PNT(0.004)SFTSDGSPSPLGGIK 84.809 2.30E-05 16795000 3701.1 3585.9 3888.2 3249.8 4054.9 3699.4 4109.1 3732.7 3960.8 3823.2 TRUE FALSE 3386.30201 3352.457258 3624.279817 3500.100159 3893.384747 3908.856831 3834.989436 3700.065397 4372.539334 4296.84688 0.788089989 0.780213341 0.843474277 0.814574095 0.906102744 0.909703543 0.892512473 0.861111764 1.017615814 1 12.06906265 -4.836496981 0.170800705 1.037009358 0.546382935 0.76873724 0.037068663 9.149447341 0.284315923 0.125820282 0.997765966 1.46E-05 4.836496981 -0.490626423 MQNNSSPSIS(ph)PNTSFTSDGSPSPLGGIK ddPTM_A459_MK2206_30min_R2 1 MQNNSSPSISPNTSFTSDGSPSPLGGIK 28 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNSS(0.002)PS(0.104)IS(0.855)PNT(0.037)S(0.003)FTSDGSPSPLGGIK 131.75 1.90E-12 8076900 33922 39149 34269 39759 37016 34826 58915 52116 42512 58921 TRUE FALSE 36519.0944 37204.91759 35411.51136 36510.56252 35562.56585 36151.32783 51179.38973 58927.74014 46209.61692 56998.4126 0.64070371 0.652736031 0.621271887 0.640554023 0.62392204 0.634251485 0.897909036 1.033848794 0.810717611 1 15.79863412 -7.301959644 4.326076522 0.944765292 0.634288146 0.878111491 0.054932617 0.065168028 2.78013799 0.021875364 0.014817668 4.99E-08 7.301959644 -0.310477146 MQNNSSPSISPNT(ph)SFTSDGSPSPLGGIK ddPTM_A459_MK2206_30min_R2 1 MQNNSSPSISPNTSFTSDGSPSPLGGIK 28 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNS(0.001)S(0.001)PS(0.011)IS(0.378)PNT(0.432)S(0.171)FT(0.006)SDGSPSPLGGIK 78.484 0.00010713 6803400 20809 25728 27210 32284 29554 27904 47105 38207 34826 52888 TRUE FALSE 22402.15304 24450.38493 28117.16782 29646.29393 28393.56146 28965.90627 40920.05692 43200.78608 37855.10253 51162.26889 0.43786473 0.477898761 0.549568431 0.5794562 0.554970725 0.566157579 0.79980927 0.844387613 0.739902732 1 15.64279262 -7.483769186 0.365379795 1.010469369 0.415974509 0.888618734 0.057448082 0.419028343 0.150213769 0.076271523 0.085678431 3.28E-08 7.483769186 -0.59449486 down MQNNSSPSISPNT(ph)SFTSDGSPSPLGGIKR ddPTM_A459_MK2206_30min_R1 1 MQNNSSPSISPNTSFTSDGSPSPLGGIKR 29 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNS(0.019)S(0.017)PS(0.048)IS(0.108)PNT(0.308)S(0.308)FT(0.104)S(0.073)DGS(0.011)PS(0.004)PLGGIKR 52.674 0.020411 8428900 394.52 539.16 502.25 279.52 461.87 520.53 508.21 509.39 358.78 192.31 TRUE FALSE 360.9640023 504.060586 468.1586693 301.0486788 443.4727399 550.0019588 474.3082382 504.9364569 396.0764649 216.1348147 1.670087269 2.332158226 2.166049325 1.392874532 2.051833901 2.5447171 2.194501792 2.336210655 1.83254357 1 7.755787668 -6.50548323 24.78674321 2.102843505 1.914151536 0 0.460099855 2783.09867 3965623.125 0.140349103 0.155625627 3.12E-07 6.50548323 -0.188691969 MQNNSSPSISPNTSFTSDGSPS(ph)PLGGIKR ddPTM_A459_MK2206_30min_R1 1 MQNNSSPSISPNTSFTSDGSPSPLGGIKR 29 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNSSPSISPNT(0.002)SFT(0.001)S(0.004)DGS(0.031)PS(0.96)PLGGIKR 64.847 0.00035484 16304000 1613.8 1120.3 1213 1249.8 2741.3 2683.9 2273.9 1492.2 832.37 857.11 TRUE FALSE 1476.537836 1047.368266 1130.66494 1346.059813 2632.108216 2835.860099 2122.21228 1479.153853 918.8978402 963.2952577 1.532798821 1.087276469 1.173747022 1.397349153 2.732400264 2.943915768 2.203075602 1.535514517 0.953910894 1 9.911834253 -6.026045078 23.7607106 1.996304965 1.253319738 0.17185333 0.623386251 623.4229454 568743.4186 0.198526163 0.25742819 9.42E-07 6.026045078 -0.742985227 MQNNSSPSISPNTSFTSDGSPS(ph)PLGGIKR ddPTM_A459_MK2206_30min_R2 1 MQNNSSPSISPNTSFTSDGSPSPLGGIKR 29 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNSSPSISPNT(0.004)S(0.001)FT(0.002)S(0.005)DGS(0.101)PS(0.888)PLGGIKR 77.798 2.35E-05 8208000 11896 15584 14135 16653 21127 19120 17117 13503 15936 16220 TRUE FALSE 12806.76691 14810.12122 14606.25385 15292.39663 20297.44783 19847.625 14869.51734 15267.88846 17322.08447 15690.74273 0.816198897 0.943876366 0.930883521 0.974612668 1.29359382 1.264925781 0.94766179 0.973050717 1.103968421 1 13.93762602 -6.013602863 21.29683674 1.100156688 0.910187078 0.398422559 0.111543884 104.1670598 163089.0294 0.035748223 0.048399875 9.69E-07 6.013602863 -0.18996961 MQPQASAIPS(ph)PGK ddPTM_A459_MK2206_30min_R2 2 MQPQASAIPSPGK 13 0 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 MQPQASAIPS(1)PGK;MQPQASAIPS(1)PGK 149.59 0.00051541 11752200 121158 85570 83811 75128 76258 56581 115910 86021 55467 113778 TRUE FALSE 130433.9496 81320.71823 86605.21691 68989.80208 73263.72775 58734.2296 100690.8778 97264.24005 60291.4194 110065.4332 1.18505825 0.73883976 0.786852097 0.626807164 0.665637936 0.533630114 0.914827434 0.883694701 0.547777969 1 16.74800193 -4.761320787 8.166496724 0.734232972 1.190151625 0.442091719 0.148191361 0.084108675 53.14050531 0.036206394 0.211347562 1.73E-05 4.761320787 0.455918653 MQRRGALFGMPGGS(ph)GGRK ddPTM_A459_MK2206_30min_R1 1 MQRRGALFGMPGGSGGRK 18 3 Q92995 Q92995 USP13 Ubiquitin carboxyl-terminal hydrolase 13 1 MQRRGALFGMPGGS(1)GGRK 54.768 0.03509 381810000 6764.4 6790 6375.6 5825.9 6921.1 5745.3 6365.8 5751.2 5701.2 6096.9 TRUE FALSE 6189.052259 6347.969766 5942.842035 6274.611827 6645.417931 6070.593921 5941.149097 5700.917865 6293.860142 6852.230001 0.903217238 0.926409324 0.867285838 0.915703621 0.969818283 0.885929678 0.867038774 0.831979934 0.91851268 1 12.74235786 MQSLS(ph)LNK ddPTM_A459_MK2206_30min_R2 1 MQSLSLNK 8 0 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 MQS(0.109)LS(0.891)LNK 99.283 0.018777 10642000 52218 65515 54634 45358 53022 58431 81781 47979 76941 59291 TRUE FALSE 56215.85023 62261.62037 56455.47029 41652.10631 50940.08987 60654.63265 71043.05646 54250.02004 83633.1891 57356.33953 0.980115724 1.085522906 0.984293467 0.726198824 0.888133557 1.057505293 1.238626053 0.945841741 1.458133308 1 15.80766533 -6.969814638 4.646945239 1.156108266 0.934050524 0.324907737 0.154858827 0.247259966 12.9021384 0.056904419 0.048479245 1.07E-07 6.969814638 -0.222057742 MRDAGDPS(ph)PPNK ddPTM_A459_MK2206_30min_R1 1 MRDAGDPSPPNK 12 1 Q9BTA9-5;Q9BTA9;A0A0A0MRT2;Q9BTA9-2;A0A494C0S5;E9PMZ7;C9JMU2;A0A494C0B7;A0A494C0C1;C9JVK6;C9JD58;J3QTA0;Q9BTA9-3 Q9BTA9-5 WAC WW domain-containing adapter protein with coiled-coil 1 MRDAGDPS(1)PPNK 118.52 0.021372 14947000 2129.6 2018 2054.9 1946.2 2168.1 2065.2 2029 2225.6 1696.8 1390.4 TRUE FALSE 1948.466337 1886.627833 1915.419113 2096.096661 2081.739986 2182.129839 1893.649112 2206.141814 1873.188432 1562.653249 1.246896161 1.2073234 1.225748012 1.341370302 1.332182931 1.396426137 1.211816578 1.411792293 1.198723027 1 10.60978197 -8.536745396 22.63495579 0.999999997 1.295189076 0.6252236 0.070122836 419.5052292 684771.7858 0.069226453 0.017874193 2.91E-09 8.536745396 0.295189079 MRDAGDPS(ph)PPNK ddPTM_A459_MK2206_30min_R2 1 MRDAGDPSPPNK 12 1 Q9BTA9-5;Q9BTA9;A0A0A0MRT2;Q9BTA9-2;A0A494C0S5;E9PMZ7;C9JMU2;A0A494C0B7;A0A494C0C1;C9JVK6;C9JD58;J3QTA0;Q9BTA9-3 Q9BTA9-5 WAC WW domain-containing adapter protein with coiled-coil 1 MRDAGDPS(1)PPNK 62.69 0.047943 28740000 55185 72056 59495 73633 81576 74695 100190 52852 55186 90226 TRUE FALSE 59410.00603 68477.80382 61478.53361 67616.94836 78372.91635 77537.57057 87034.93265 59759.93787 59985.97853 87281.93301 0.680667854 0.784558745 0.704367233 0.774695817 0.897928284 0.888357623 0.997170086 0.684677067 0.687266843 1 16.41339543 -6.048508637 4.974851662 0.851385049 0.730232492 0.259776162 0.103798365 0.336759471 18.82024082 0.03246441 0.043737854 8.94E-07 6.048508637 -0.121152557 MREDYDS(ph)VEQDGDEPGPQR ddPTM_A459_MK2206_30min_R2 3 MREDYDSVEQDGDEPGPQR 19 1 Q9Y5S9;Q9Y5S9-2 Q9Y5S9 RBM8A RNA-binding protein 8A 1 MREDY(0.005)DS(0.995)VEQDGDEPGPQR;MREDYDS(1)VEQDGDEPGPQR;MREDYDS(1)VEQDGDEPGPQR 282.97 3.46E-71 40487000 70497 82640 74292 79905 85602 76261 88093 68922 74570 78133 TRUE FALSE 75894.30452 78536.21777 76768.8582 73376.5059 82240.83536 79163.16579 76526.28328 77930.34204 81055.96381 75583.52661 1.004111715 1.039065274 1.015682407 0.970800242 1.088078832 1.047360045 1.012473044 1.031049298 1.072402512 1 16.20578421 -6.254430756 24.99418867 1.042248679 1.010266189 0.253886247 0.028786995 885.3224682 3157241.116 0.008650624 0.010960534 5.57E-07 6.254430756 -0.03198249 MREDYDSVEQDGDEPGPQR ddPTM_A459_MK2206_30min_R1 1 MREDYDSVEQDGDEPGPQR 19 1 Q9Y5S9;Q9Y5S9-2 Q9Y5S9 RBM8A RNA-binding protein 8A 0 208.59 5.57E-16 9216900 1898.7 1933.3 2063.9 1668.9 1926.5 2134.6 2320.9 1918.8 1669.9 1474.2 FALSE TRUE 1737.205595 1807.441819 1923.808218 1797.438967 1849.763426 2255.459207 2166.076996 1902.024134 1843.492081 1656.835026 1.048508492 1.090900295 1.161134445 1.08486297 1.116443941 1.361305847 1.307358284 1.147986435 1.112658806 1 10.69421424 -6.553102856 24.99991491 1.206723503 1.100597371 0.145795602 0.097864943 331.3891678 274106.7896 0.032932622 0.032932949 2.80E-07 6.553102856 -0.106126132 MREEQLAR ddPTM_A459_MK2206_30min_R2 1 MREEQLAR 8 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3;H0YF21 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 0 90.709 0.036457 0 3422.3 5818.9 4322.5 6063.2 5078.5 7630.3 6764.5 3853.7 4054 4695.3 FALSE TRUE 3684.313919 5529.941887 4466.609993 5567.817165 4879.092573 7920.676413 5876.313024 4357.391822 4406.609592 4542.092746 0.811148985 1.217487664 0.983381503 1.225826393 1.074194836 1.743838547 1.293745714 0.959335722 0.970171645 1 12.14914145 -4.757614956 24.79674954 1.177633414 0.811148398 0.177257288 0.225535477 185.7854974 1204401.306 0.05930447 0.43236388 1.75E-05 4.757614956 -0.366485015 MRLEGEGRS(ph)AR ddPTM_A459_MK2206_30min_R1 1 MRLEGEGRSAR 11 2 Q9HBX8-1 Q9HBX8-1 1 MRLEGEGRS(1)AR 87.298 0.036456 5121900 1449.8 1671.5 1889.8 1434.2 1936 1803.4 2040.5 1608.5 1175.7 1461.6 TRUE FALSE 1326.486897 1562.685046 1761.525641 1544.662333 1858.88502 1905.50695 1904.381968 1594.437054 1297.918222 1642.674043 0.807516806 0.951305619 1.072352515 0.940334048 1.131621352 1.16000308 1.159318233 0.970635082 0.79012524 1 10.68183052 -4.841095364 2.384935742 1.037219999 0.769459524 0.276152085 0.108089106 0.665863232 5.206222558 0.030511392 0.356042642 1.44E-05 4.841095364 -0.267760476 MRNRMAPENPQPDPFINRNY(ph)S(ph)NMK ddPTM_A459_MK2206_30min_R1 1 MRNRMAPENPQPDPFINRNYSNMK 24 3 A6NJG6 A6NJG6 ARGFX Arginine-fifty homeobox 2 MRNRMAPENPQPDPFINRNY(1)S(1)NMK 51.834 0.0094585 6306900 667.55 725.96 694 678.68 691.56 540.47 639.57 519.45 604.91 681.15 TRUE FALSE 610.7713671 678.6998721 646.8932136 730.9520512 664.0137008 571.0709443 596.9054523 514.9085034 667.7925592 765.5360044 0.797834933 0.886568193 0.845019973 0.954823871 0.867384025 0.745975292 0.779722245 0.672611739 0.872320251 1 9.580326421 -6.670674236 7.993781928 0.791673815 0.87513004 0.062307658 0.089273874 0.441744146 34.08994099 0.028182247 0.028136849 2.13E-07 6.670674236 0.083456225 MRPNSNT(ph)PVNETATASDSK ddPTM_A459_MK2206_30min_R1 1 MRPNSNTPVNETATASDSK 19 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 MRPNS(0.021)NT(0.979)PVNETATASDSK 84.125 0.0057231 3427700 1837.9 1829.1 1882.9 1853.6 1921.4 1453.9 1703.6 1606.7 1875.3 1750.7 TRUE FALSE 1681.576954 1710.025258 1755.093994 1996.364593 1844.866569 1536.218562 1589.955952 1592.652791 2070.244146 1967.589933 0.854637913 0.869096364 0.892001918 1.014624318 0.937627571 0.780761548 0.808072823 0.809443454 1.052172565 1 10.94221386 -8.270251139 24.93988563 1.026086306 0.873366075 0.472136889 0.065639626 687.2993998 1945235.447 0.067549852 0.018493357 5.37E-09 8.270251139 -0.152720231 MRPNSNT(ph)PVNETATASDSK ddPTM_A459_MK2206_30min_R2 2 MRPNSNTPVNETATASDSK 19 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 MRPNS(0.005)NT(0.995)PVNETATASDSK;MRPNS(0.244)NT(0.699)PVNET(0.056)AT(0.001)ASDSK 126.1 0.00051999 12758400 51839 63885 52617 66024 61755 49398 66188 50708 45385 62782 TRUE FALSE 55807.8337 60712.5638 54371.22452 60629.628 59330.18841 51277.8755 57497.43609 57335.70971 49332.50526 60733.42848 0.918898127 0.999656455 0.895243787 0.998290884 0.976895095 0.844310568 0.946718101 0.944055212 0.812279275 1 15.89020319 -6.708626046 24.99984079 0.90830286 0.958896933 0.147502517 0.058023008 182.9391082 86595.63642 0.018228563 0.018228546 1.96E-07 6.708626046 0.050594073 MRS(ph)PQPARPGSAAVPGAAFAPIPR ddPTM_A459_MK2206_30min_R1 2 MRSPQPARPGSAAVPGAAFAPIPR 24 2 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 MRS(0.991)PQPARPGS(0.009)AAVPGAAFAPIPR;MRS(0.983)PQPARPGS(0.017)AAVPGAAFAPIPR 59.469 0.0037456 105071000 1786.99 1897.87 1968.33 1493.42 1906.86 1593.71 1793.19 1934.82 1710.96 1448.57 TRUE FALSE 1634.997117 1774.318318 1834.725244 1608.443467 1830.905728 1683.944483 1673.569567 1917.904073 1888.820415 1628.029788 1.004279608 1.089856175 1.126960488 0.987969311 1.124614391 1.034345007 1.027972326 1.1780522 1.160187872 1 10.66891138 -7.751050967 24.99917119 1.126840036 1.059682204 0.131643385 0.062718317 323.7820922 779169.7655 0.028640077 0.016299873 1.77E-08 7.751050967 -0.067157832 MRS(ph)PQPARPGSAAVPGAAFAPIPR ddPTM_A459_MK2206_30min_R2 1 MRSPQPARPGSAAVPGAAFAPIPR 24 2 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 MRS(0.942)PQPARPGS(0.058)AAVPGAAFAPIPR 72.145 0.0044112 12558000 14454 14346 14495 18172 19819 15132 21153 15139 15791 13822 TRUE FALSE 15560.60935 13633.5985 14978.25607 16687.28947 19040.80648 15707.85886 18375.58569 17117.71928 17164.47264 13370.98927 1.163759019 1.019640224 1.120205526 1.248022052 1.424038722 1.17477163 1.37428767 1.280213373 1.28371 1 13.70681859 -5.752791124 4.031857484 1.276967493 1.088122094 0.268207544 0.113609912 0.222055664 8.078681384 0.029883162 0.050469781 1.77E-06 5.752791124 -0.1888454 MS(ph)ADMSEIEAR ddPTM_A459_MK2206_30min_R1 2 MSADMSEIEAR 11 0 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 MS(1)ADMSEIEAR;MS(1)ADMSEIEAR 229.56 3.60E-07 44642000 2904.05 3086.51 3567.79 2946.54 3287.89 3249.53 3811.9 3162.05 2971.29 2672.36 TRUE FALSE 2657.045298 2885.577638 3325.618355 3173.483021 3156.926379 3433.51558 3557.615106 3134.40453 3280.166228 3003.432132 0.884669665 0.960760061 1.107272683 1.056618855 1.051106281 1.143197325 1.184516563 1.043607577 1.092139287 1 11.55239635 -5.0776173 2.784204788 1.090256911 0.887160096 0.633890281 0.0505018 0.179616252 2.547892268 0.013703348 0.060081324 8.36E-06 5.0776173 -0.203096815 MS(ph)ADMSEIEAR ddPTM_A459_MK2206_30min_R2 2 MSADMSEIEAR 11 0 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 MS(0.514)ADMS(0.486)EIEAR;MS(1)ADMSEIEAR 198.52 1.97E-05 21593600 21987 27384 25702 30021 38506 33086 35464 29141 31555 32318 TRUE FALSE 23670.34163 26024.15038 26558.89185 27568.18827 36994.06096 34345.11091 30807.5342 32949.82876 34299.59686 31263.46631 0.75712467 0.832414107 0.849518463 0.881802037 1.183300041 1.098570151 0.985416457 1.053940354 1.097114329 1 14.93219012 -6.089406907 5.053855435 1.069082998 0.821748519 0.81401338 0.056683549 0.097206899 4.089068482 0.017749829 0.023420707 8.14E-07 6.089406907 -0.247334479 MS(ph)DDEDDDEEEYGKEEHEK ddPTM_A459_MK2206_30min_R2 2 MSDDEDDDEEEYGKEEHEK 19 1 Q7KZ85;Q7KZ85-3 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 MS(1)DDEDDDEEEYGKEEHEK;MS(1)DDEDDDEEEYGKEEHEK 113.51 0.00029008 20197300 40228 36759 37687 33227 32667 20483.8 42783 31526 28241 42640 TRUE FALSE 43307.88661 34933.60151 38943.46577 30512.24781 31384.32944 21263.32536 37165.54071 35646.55644 30697.35113 41248.66029 1.049922259 0.846902694 0.944114681 0.73971488 0.76085694 0.515491296 0.901012068 0.864187011 0.744202379 1 15.33205964 -4.540671816 0.998295743 0.782607927 1.27117174 0.242864937 0.127750914 4.077985457 2.377252972 0.042093316 2.395805171 2.88E-05 4.540671816 0.488563813 MS(ph)ESPTPCSGSSFEETEALVNTAAK ddPTM_A459_MK2206_30min_R1 2 MSESPTPCSGSSFEETEALVNTAAK 25 0 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 MS(0.35)ES(0.308)PT(0.249)PCS(0.065)GS(0.021)S(0.007)FEETEALVNTAAK;MS(0.54)ES(0.441)PT(0.02)PCSGSSFEETEALVNTAAK 124.97 1.42E-07 22568700 2840.15 2791.15 2451.53 2308.97 2921.99 2729.77 2576.5 2549.67 2540.58 2454.3 TRUE FALSE 2598.580328 2609.445628 2285.126974 2486.807269 2805.600951 2884.327218 2404.626386 2527.378504 2804.682383 2758.357213 0.942075347 0.946014394 0.828437652 0.901553743 1.017127491 1.045668489 0.871760327 0.91626222 1.016794478 1 11.42959359 -6.232336301 22.73349898 0.971826497 0.902049624 0.281546584 0.056899246 358.3935631 279953.1345 0.018037261 0.02327874 5.86E-07 6.232336301 -0.069776873 MS(ph)ESPTPCSGSSFEETEALVNTAAK ddPTM_A459_MK2206_30min_R2 1 MSESPTPCSGSSFEETEALVNTAAK 25 0 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 MS(0.321)ES(0.275)PT(0.275)PCS(0.098)GS(0.031)S(0.001)FEETEALVNTAAK 60.352 0.013069 3844700 17181 17302 16365 22701 16906 15619 19949 12412 16171 14940 TRUE FALSE 18496.39057 16442.80784 16910.60093 20846.25568 16242.18549 16213.39199 17329.67234 14034.29102 17577.52435 14452.50902 1.27980481 1.13771303 1.170080635 1.442397002 1.123831541 1.121839257 1.199077081 0.971062602 1.216226492 1 13.81903235 -6.487185294 24.88325392 1.107801407 1.247750559 0.339781277 0.103758634 715.7633152 498985.81 0.031676143 0.035902936 3.26E-07 6.487185294 0.139949152 MS(ph)GFIYQGK ddPTM_A459_MK2206_30min_R1 2 MSGFIYQGK 9 0 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q15052-2;Q15052;E7EUY6;F6SJA5 B1ALK7 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 MS(1)GFIYQGK;MS(1)GFIYQGK 127.87 0.0044607 398400000 11154.4 10797.1 11627.4 9247.2 10010.3 9461.6 9891.3 10022.6 8676.9 7043.9 TRUE FALSE 10205.65971 10094.20683 10838.16448 9959.420946 9611.568554 9997.307615 9231.469425 9934.973465 9578.894806 7916.551511 1.289154715 1.275076252 1.369051217 1.258050419 1.21411053 1.262836173 1.16609731 1.254962271 1.20998326 1 12.95065641 -14.52287874 0.135847293 0.111517823 1.354758314 0.803284155 0.040889015 61.17190175 0.513606834 14.66255075 0.282357781 3.00E-15 14.52287874 1.243240491 MS(ph)GFIYQGK ddPTM_A459_MK2206_30min_R2 2 MSGFIYQGK 9 0 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q15052-2;Q15052;E7EUY6;F6SJA5 B1ALK7 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 MS(1)GFIYQGK;MS(1)GFIYQGK 120.86 0.0064469 260170000 314953 321769 324840 378340 367630 266041 405310 315060 317856 262830 TRUE FALSE 339066.0438 305790.4194 335670.0035 347428.4118 353194.999 276165.3767 352092.3101 356239.4238 345502.5403 254253.8786 1.333572749 1.202697166 1.320215862 1.366462583 1.389143013 1.086179602 1.384806053 1.401116969 1.358887983 1 17.95591026 -11.15546843 6.499402655 0.998714301 1.314113741 0.505798966 0.093661627 0.0017888 0.00010112 0.092967826 0.022464424 6.99E-12 11.15546843 0.31539944 MS(ph)KPGSPGSVIPAQAHGK ddPTM_A459_MK2206_30min_R2 1 MSKPGSPGSVIPAQAHGK 18 1 Q8IZD2-6;Q8IZD2-5;Q8IZD2-2;Q8IZD2-7;Q8IZD2 Q8IZD2-6 KMT2E Histone-lysine N-methyltransferase 2E 1 MS(0.694)KPGS(0.247)PGS(0.059)VIPAQAHGK 66.448 0.013449 10357000 76860 85518 81344 92651 85083 75630 98153 72675 69649 91183 TRUE FALSE 82744.4607 81271.30047 84055.96836 85081.11692 81742.21391 78508.15265 85265.3932 82173.87203 75706.94412 88207.70618 0.938063853 0.921362815 0.952932255 0.964554239 0.926701503 0.890037345 0.966643357 0.931595159 0.858280386 1 16.42861708 -6.47952797 24.58407399 0.925258104 0.94351815 0.033356427 0.037573283 1344.202745 762291.3077 0.011398231 0.012923164 3.31E-07 6.47952797 0.018260045 MS(ph)LPDVDLDLKGPK ddPTM_A459_MK2206_30min_R1 1 MSLPDVDLDLKGPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MS(1)LPDVDLDLKGPK 74.338 0.025604 5380200 5205.9 5344.2 5051.8 5169.7 3874.2 2731.5 3250.2 4231.2 4095.4 3552.4 TRUE FALSE 4763.110868 4996.291609 4708.897891 5567.87119 3719.88241 2886.155169 3033.385088 4194.207064 4521.131486 3992.498131 1.193015178 1.251419899 1.179436467 1.394583293 0.931718009 0.722894557 0.759771198 1.050521986 1.132406663 1 11.96307602 -6.283127548 21.14882424 0.916255928 1.249015651 0.602013782 0.127690954 81.76945124 79735.3053 0.0432184 0.049095142 5.21E-07 6.283127548 0.332759723 MS(ph)LPLLAGGVADDINTNKK ddPTM_A459_MK2206_30min_R1 1 MSLPLLAGGVADDINTNKK 19 1 Q15398-1;Q15398;Q15398-3 Q15398-1 DLGAP5 Disks large-associated protein 5 1 MS(1)LPLLAGGVADDINTNKK 131.35 0.00013813 7412300 2471.7 2949.1 2378.1 2006.3 1921.5 1824.5 2420.2 1994.8 2491.4 2269.1 TRUE FALSE 2261.468936 2757.113054 2216.681198 2160.825574 1844.962586 1927.801613 2258.752874 1977.359674 2750.389946 2550.213239 0.886776408 1.081130398 0.869214058 0.847311723 0.723454242 0.755937419 0.885711375 0.775370327 1.078494105 1 11.31640217 -10.8590482 20.95179947 0.999999999 0.872009697 0.089622422 0.115009365 0 0 0.11588222 0.028105567 1.38E-11 10.8590482 -0.127990302 MS(ph)LPLLAGGVADDINTNKK ddPTM_A459_MK2206_30min_R2 3 MSLPLLAGGVADDINTNKK 19 1 Q15398-1;Q15398;Q15398-3 Q15398-1 DLGAP5 Disks large-associated protein 5 1 MS(1)LPLLAGGVADDINTNKK;MS(1)LPLLAGGVADDINTNKK;MS(1)LPLLAGGVADDINTNKK 108.69 0.0015778 4281000 43781 37705 34613 40392 33510.6 28680.3 40414 32313.3 25431.9 36191 TRUE FALSE 47132.90702 35832.62453 35766.98014 37091.84439 32194.80547 29771.74891 35107.59325 36536.75926 27643.92069 35010.09063 1.346266353 1.023494195 1.021619182 1.059461536 0.919586464 0.850376231 1.002784986 1.043606532 0.789598661 1 15.09548318 -1.522879554 0.904160585 0.949203046 198.7872189 0.672832846 0.080721793 549.8017066 1.188347303 0.026701495 224486.997 0.029999944 1.522879554 197.8380159 MS(ph)PEPVPPPPPPQCPGCDR ddPTM_A459_MK2206_30min_R2 2 MSPEPVPPPPPPQCPGCDR 19 0 Q1L5Z9 Q1L5Z9 LONRF2 LON peptidase N-terminal domain and RING finger protein 2 1 MS(1)PEPVPPPPPPQCPGCDR;MS(1)PEPVPPPPPPQCPGCDR 114.58 0.0014572 2286300 14980 15698.6 17641.9 16811.5 13416.3 15465 17704.1 13500.7 16556.4 14389.9 TRUE FALSE 16126.88032 14919.03035 18230.07214 15437.94667 12889.50865 16053.53141 15379.5304 15265.28784 17996.44574 13920.35874 1.158510396 1.071741801 1.309597869 1.109019312 0.925946586 1.153241214 1.104822849 1.09661598 1.292814796 1 13.76490877 -10.96901152 2.925115741 0.996880099 1.130527 0.132237804 0.103578376 46946324.5 55900119.1 1212715.347 0.025612548 1.07E-11 10.96901152 0.133646901 MS(ph)PGETASFNK ddPTM_A459_MK2206_30min_R2 1 MSPGETASFNK 11 0 Q9P212-2;Q9P212 Q9P212-2 PLCE1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1" 1 MS(0.999)PGET(0.001)ASFNK 96.745 0.019927 3898500 32726 35632 31434 37165 32988 31251 35310 29792 32356 36571 TRUE FALSE 35231.52772 33862.56669 32481.99387 34128.50062 31692.72537 32440.2787 30673.75459 33685.91669 35170.26639 35377.69127 0.995868483 0.957172882 0.918149057 0.964689876 0.895839277 0.916969919 0.867036641 0.952179622 0.994136845 1 15.11055228 -10.92232812 8.514388851 1.000000485 0.937004855 0.167839669 0.039344084 3.78E-07 2.67E-08 0.039754539 0.009641818 1.20E-11 10.92232812 -0.06299563 MS(ph)PMGTASGSNSPTSDSASVQR ddPTM_A459_MK2206_30min_R1 6 MSPMGTASGSNSPTSDSASVQR 22 0 Q5QPB1;O76080 Q5QPB1 ZFAND5 AN1-type zinc finger protein 5 1 MS(0.999)PMGT(0.001)ASGSNSPTSDSASVQR;MS(1)PMGTASGSNSPTSDSASVQR;MS(1)PMGTASGSNSPTSDSASVQR;MS(1)PMGTASGSNSPTSDSASVQR;MS(1)PMGTASGSNSPTSDSASVQR;MS(0.997)PMGT(0.003)ASGSNSPTSDSASVQR 312.01 1.84E-123 88028900 12391.06 12548.16 13074.05 10773.74 12808.84 11544.39 11798.63 11706.57 10432.53 9461.49 TRUE FALSE 11337.13528 11731.2725 12186.61991 11603.53532 12298.63678 12198.02339 11011.56492 11604.22069 11517.02883 10633.65081 1.066156439 1.103221529 1.14604289 1.091208986 1.156577078 1.147115285 1.035539451 1.091273439 1.083073822 1 13.37634938 -8.776544718 0.618308663 0.99961074 1.115138098 0.471054887 0.034616802 1.068187091 0.848579502 0.03981266 0.015307748 1.67E-09 8.776544718 0.115527358 MS(ph)PMGTASGSNSPTSDSASVQR ddPTM_A459_MK2206_30min_R2 11 MSPMGTASGSNSPTSDSASVQR 22 0 Q5QPB1;O76080 Q5QPB1 ZFAND5 AN1-type zinc finger protein 5 1 MS(0.983)PMGT(0.017)ASGSNSPTSDSASVQR;MS(0.997)PMGT(0.003)ASGSNSPTSDSASVQR;MS(1)PMGTASGSNSPTSDSASVQR;MS(1)PMGTASGSNSPTSDSASVQR;MS(1)PMGTASGSNSPTSDSASVQR;MS(0.996)PMGT(0.003)ASGSNSPT(0.001)SDSASVQR;MS(0.956)PMGT(0.044)ASGSNSPTSDSASVQR;MS(1)PMGTASGSNSPTSDSASVQR;MS(0.896)PMGT(0.093)AS(0.009)GS(0.001)NS(0.001)PTSDSASVQR;MS(1)PMGTASGSNSPTSDSASVQR;MS(0.99)PMGT(0.01)ASGSNSPTSDSASVQR 317.34 2.10E-141 146357100 186405.9 221592.9 204501.9 246779.2 239277.6 214689.2 260315.3 206485.2 187813.7 223687.1 TRUE FALSE 200677.279 210588.9188 211319.8913 226616.55 229882.3592 222859.3479 226135.5884 233473.5246 204149.3961 216388.2082 0.927394707 0.973199605 0.976577666 1.04726848 1.062360842 1.029905233 1.045045801 1.078956781 0.943440485 1 17.72326236 -5.538601201 2.438447125 1.034833585 0.94915836 0.431149388 0.037187087 0.255442948 3.019137142 0.010302162 0.023601488 2.89E-06 5.538601201 -0.085675224 MS(ph)PNQLCSVPLQPGR ddPTM_A459_MK2206_30min_R1 2 MSPNQLCSVPLQPGR 15 0 Q86TB9-4 Q86TB9-4 PATL1 Protein PAT1 homolog 1 1 MS(0.985)PNQLCS(0.015)VPLQPGR;MS(0.988)PNQLCS(0.012)VPLQPGR 181.86 2.05E-05 52374000 2836 3417.3 3023.7 2859.1 3230 2905.3 3030.1 2855.4 3015.6 3045.8 TRUE FALSE 2594.783308 3194.833149 2818.459669 3079.308377 3101.34226 3069.795575 2827.967558 2830.435539 3329.082411 3423.136699 0.758013347 0.933305746 0.823355862 0.899557525 0.905994278 0.896778553 0.826133399 0.82685437 0.972523946 1 11.74110319 -14.52287875 0.171924504 1.51862274 0.841622337 0.371072807 0.056510816 153.4592271 1.449078618 26.9811054 0.194025724 3.00E-15 14.52287875 -0.677000403 MS(ph)PNQLCSVPLQPGR ddPTM_A459_MK2206_30min_R2 5 MSPNQLCSVPLQPGR 15 0 Q86TB9-4 Q86TB9-4 PATL1 Protein PAT1 homolog 1 1 MS(0.966)PNQLCS(0.034)VPLQPGR;MS(1)PNQLCSVPLQPGR;MS(1)PNQLCSVPLQPGR;MS(1)PNQLCSVPLQPGR;MS(1)PNQLCSVPLQPGR 195.45 3.36E-05 53259600 82061 115698 91346 121075 118134 112279 126987 92854 89762 109097 TRUE FALSE 88343.65325 109952.6056 94391.43005 111182.7852 113495.4656 116551.856 110313.4544 104990.3366 97569.33651 105537.1738 0.837085645 1.041837692 0.894390352 1.053494055 1.075407475 1.104367796 1.045256855 0.994818535 0.924502078 1 16.68739173 -4.756789407 24.98098302 1.017811242 0.83708537 0.426254322 0.061804843 146.1024625 784808.5961 0.016416971 0.128549232 1.75E-05 4.756789407 -0.180725871 MS(ph)PNY(ph)FT(ph)IT(ph)VK ddPTM_A459_MK2206_30min_R1 1 MSPNYFTITVK 11 0 F6XUP2 F6XUP2 ATP9B 4 MS(1)PNY(1)FT(1)IT(1)VK 61.679 0.037221 2491700 0 0 0 0 70.364 0 0 0 0 0 TRUE FALSE 0 0 0 0 67.56125288 0 0 0 0 0 0 MS(ph)PPPSGFGER ddPTM_A459_MK2206_30min_R1 1 MSPPPSGFGER 11 0 A0A087WZ13;E9PAU2;Q8IY67-2;K7EQG2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 MS(1)PPPSGFGER 101.72 0.014994 8647500 3651.3 4195 3450.4 2707.9 3140.4 2910.3 3641.7 3013.1 3248.5 3109.1 TRUE FALSE 3340.737761 3921.904738 3216.196461 2916.462927 3015.311218 3075.078671 3398.768838 2986.756784 3586.1932 3494.278781 0.95605931 1.12237889 0.920417821 0.834639452 0.862928063 0.880032437 0.972666765 0.854756295 1.026304261 1 11.770779 -5.377327857 7.694353293 0.908607027 1.038580292 0.303147746 0.071728355 0.266623092 15.88374235 0.018008875 0.037683855 4.19E-06 5.377327857 0.129973265 MS(ph)PVDFHTPSSPK ddPTM_A459_MK2206_30min_R1 1 MSPVDFHTPSSPK 13 0 Q02297-2;Q02297-6;Q02297;Q02297-7;H0YBA3;Q02297-11;A0A494C0Q4;A0A494C1F5;A0A494C1F8 Q02297-2 NRG1 "Pro-neuregulin-1, membrane-bound isoform;Neuregulin-1" 1 MS(1)PVDFHTPSSPK 149.82 0.00037288 0 2238.3 1996 2192.5 2181.5 2498 2418.3 2594.6 3019.3 3089.8 2749.8 TRUE FALSE 2047.920831 1866.060037 2043.679209 2349.519508 2398.49937 2555.222056 2421.518968 2992.902578 3410.995767 3090.465984 0.662657619 0.603811868 0.661285133 0.760247652 0.77609635 0.826808018 0.783544935 0.968430843 1.103715681 1 11.59360867 -7.205188433 0.579664309 1.061240012 0.632075791 0.859835555 0.05778147 0.30655145 0.213913687 0.055669487 0.044662495 6.23E-08 7.205188433 -0.429164221 MS(ph)PVDFHTPSSPK ddPTM_A459_MK2206_30min_R2 2 MSPVDFHTPSSPK 13 0 Q02297-2;Q02297-6;Q02297;Q02297-7;H0YBA3;Q02297-11;A0A494C0Q4;A0A494C1F5;A0A494C1F8 Q02297-2 NRG1 "Pro-neuregulin-1, membrane-bound isoform;Neuregulin-1" 1 MS(1)PVDFHTPSSPK;MS(0.998)PVDFHT(0.002)PSSPK 78.508 0.027094 14089500 142656 94077 131278 142315 150185 166943 266810 135221 189257 213950 TRUE FALSE 153577.853 89405.27298 135654.743 130687.4093 144287.9823 173296.1328 231777.5265 152894.849 205718.2318 206968.829 0.742033734 0.43197458 0.655435621 0.631435226 0.697148372 0.837305471 1.11986683 0.738733701 0.993957557 1 17.65905398 -6.744949152 2.266243878 0.945297864 0.607387169 0.650598319 0.115448165 0.187227896 1.974600624 0.043158159 0.040242435 1.80E-07 6.744949152 -0.337910695 MS(ph)QDDFQSPPIVELR ddPTM_A459_MK2206_30min_R1 2 MSQDDFQSPPIVELR 15 0 Q5JVZ5;Q96JJ3;H0YCM7;Q96JJ3-3;Q5JW01 Q5JVZ5 ELMO2 Engulfment and cell motility protein 2 1 MS(1)QDDFQSPPIVELR;MS(1)QDDFQSPPIVELR 154.39 0.00030399 0 911.32 1020.01 971.46 937.4 995.06 666.84 854.02 924.77 936.09 868.01 TRUE FALSE 833.8074485 953.6071636 905.5200018 1009.59871 955.4246531 704.5959045 797.049884 916.6848334 1033.399905 975.5456319 0.854708812 0.977511592 0.928219011 1.0349067 0.979374641 0.722258274 0.817029832 0.939663716 1.059304528 1 9.930065547 -8.112881201 5.068017849 1.026791885 0.905336275 0.254247292 0.085918745 0.361108288 13.38907761 0.067650858 0.024488338 7.71E-09 8.112881201 -0.12145561 MS(ph)QQKQK ddPTM_A459_MK2206_30min_R1 1 MSQQKQK 7 1 A0A1B0GTR4 A0A1B0GTR4 1 MS(1)QQKQK 76.478 0.031253 17750000 4172.3 4328.4 3523.6 3828.3 3629.9 3605.9 4812.2 3854.5 2577.7 3152.9 TRUE FALSE 3817.423975 4046.620373 3284.427849 4123.156329 3485.313397 3810.062942 4491.186918 3820.800513 2845.661139 3543.505055 1.077301687 1.14198239 0.92688674 1.163581331 0.983577938 1.075224356 1.267441939 1.078254568 0.803063942 1 11.79096139 -8.188974548 8.52290416 0.90216116 1.090377685 0.36677976 0.098698402 0.335618966 36.70498115 0.066102126 0.024807492 6.47E-09 8.188974548 0.188216525 MS(ph)SDRALR ddPTM_A459_MK2206_30min_R1 1 MSSDRALR 8 1 Q8NEC7-3;Q8NEC7 Q8NEC7-3 GSTCD Glutathione S-transferase C-terminal domain-containing protein 1 MS(0.5)S(0.5)DRALR 94.262 0.012215 5992800 502.41 443.99 478.69 397.37 414.87 247.21 396.87 332.75 378.18 352.45 TRUE FALSE 459.6773912 415.0861703 446.1978565 427.9755063 398.3448494 261.2068166 370.3955264 329.8408018 417.4931643 396.1141669 1.16046693 1.047895291 1.126437512 1.080434738 1.005631413 0.659423061 0.935072657 0.832691253 1.053971807 1 8.629772489 -6.528684019 24.99881663 0.882016361 1.094131421 0.471539934 0.102982518 128.5619899 553611.1974 0.03300595 0.033094583 2.96E-07 6.528684019 0.21211506 MS(ph)SHTETSSFLQTLTGR ddPTM_A459_MK2206_30min_R1 1 MSSHTETSSFLQTLTGR 17 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 MS(0.913)S(0.086)HT(0.001)ETSSFLQTLTGR 97.621 0.0036499 8660600 2140.3 1162.2 1260 881.86 3703.8 3188.9 3364.9 1884.4 1086.8 777.82 TRUE FALSE 1958.256246 1086.540569 1174.474711 949.78101 3556.269803 3369.452762 3140.433661 1867.924889 1199.776749 874.1822138 2.240100765 1.242922301 1.343512476 1.086479449 4.068110454 3.854405533 3.592424567 2.136768353 1.372456143 1 9.771790215 -6.235672086 24.98993199 2.832804844 1.451819875 0.24664769 0.996652365 1012.083773 981550.591 0.308595726 0.398260109 5.81E-07 6.235672086 -1.380984969 MS(ph)SHTETSSFLQTLTGR ddPTM_A459_MK2206_30min_R2 4 MSSHTETSSFLQTLTGR 17 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 MS(0.98)S(0.02)HT(0.001)ETSSFLQTLTGR;MS(0.482)S(0.482)HT(0.035)ETSSFLQTLTGR;MS(0.496)S(0.496)HT(0.007)ETSSFLQTLTGR;MS(0.614)S(0.383)HT(0.001)ET(0.001)SSFLQTLTGR 209.23 4.18E-09 21124300 42210.1 61084 48766.3 75737 75254 86143 63787.8 50107.6 71659.7 47586.8 TRUE FALSE 45441.73771 58050.65738 50392.1441 69549.04483 72299.14984 89421.23223 55412.38524 56656.83537 77892.53117 46034.04661 0.987133243 1.261037464 1.094671179 1.510817535 1.57055821 1.9425021 1.20372614 1.230759395 1.692063525 1 15.49041365 -5.761280553 24.99999987 1.474951131 1.128956252 0.255989218 0.259552446 5.734177087 902239.5209 0.072201964 0.115589183 1.73E-06 5.761280553 -0.345994879 MS(ph)SPEDDSDTKR ddPTM_A459_MK2206_30min_R2 1 MSSPEDDSDTKR 12 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 MS(0.497)S(0.497)PEDDS(0.002)DT(0.003)KR 61.532 0.046813 3979200 30587 27905 26247 31994 26689 22833 31309 23392 21918 23875 TRUE FALSE 32928.76424 26519.27828 27122.06188 29379.98786 25641.05576 23701.92581 27198.09069 26449.41472 23824.38802 23095.96071 1.425736935 1.148221484 1.174320576 1.272083384 1.110196544 1.026236844 1.177612442 1.145196559 1.031539165 1 14.49535294 -1.522878745 0.330151581 1.066945084 4.003265519 0.602161393 0.07614462 46.03859301 0.655347989 0.070940361 82.49842154 0.03 1.522878745 2.936320435 MS(ph)VLNMVVRR ddPTM_A459_MK2206_30min_R1 2 MSVLNMVVRR 10 1 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog 1 MS(1)VLNMVVRR;MS(1)VLNMVVRR 83.998 0.019898 21272800 6143.3 6010.5 6655.5 5920.7 6810.7 6024.8 6974.5 5444.8 2787.2 4922.4 TRUE FALSE 5620.780075 5619.215358 6203.743203 6376.71334 6539.415397 6365.918969 6509.243831 5397.196688 3076.939414 5532.224074 1.016007306 1.015724469 1.121383212 1.152649143 1.182059025 1.150697962 1.176605239 0.975592567 0.556184886 1 12.43364388 -8.021004358 6.833818854 0.771900461 1.115584391 0.584341808 0.113718266 0.111694218 22.00644065 0.069839732 0.028293834 9.53E-09 8.021004358 0.34368393 MS(ph)VLNMVVRR ddPTM_A459_MK2206_30min_R2 1 MSVLNMVVRR 10 1 Q2NL82 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog 1 MS(1)VLNMVVRR 83.998 0.019898 1923000 11773 16325 14007 17660 15852 16825 20067 12375 17456 14936 TRUE FALSE 12674.34993 15514.32424 14473.98639 16217.12151 15229.57083 17465.28716 17432.1788 13992.45499 18974.29133 14448.63954 0.87720023 1.07375675 1.001754272 1.122397819 1.054048776 1.208784198 1.206492746 0.968427162 1.313223385 1 13.81864604 -3.56831598 0.625225922 1.133073497 2.60E-16 0.328693081 0.102176977 15.78676829 1.457828195 0.042899027 18.07700085 0.000270199 3.56831598 -1.133073497 MSCFSRPSMS(ph)PTPLDR ddPTM_A459_MK2206_30min_R1 2 MSCFSRPSMSPTPLDR 16 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MSCFS(0.003)RPS(0.017)MS(0.832)PT(0.148)PLDR;MS(0.001)CFS(0.003)RPS(0.075)MS(0.893)PT(0.028)PLDR 99.915 0.016436 210044000 3042.17 2861.98 2811.84 2944.09 3380.2 2632.76 2737.3 2962.64 2051.36 1778.84 TRUE FALSE 2783.417466 2675.664582 2620.980135 3170.844322 3245.559476 2781.824596 2554.699711 2936.737951 2264.606213 1999.216129 1.392254407 1.338356841 1.311003897 1.586043788 1.623416013 1.39145766 1.277850691 1.468944707 1.13274707 1 10.96521873 -8.407526488 3.310833969 1.002367712 1.42369609 0.65056639 0.106507765 0.155010029 3.082390057 0.112357873 0.029990207 3.91E-09 8.407526488 0.421328378 MSCFSRPSMS(ph)PTPLDR ddPTM_A459_MK2206_30min_R2 3 MSCFSRPSMSPTPLDR 16 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MSCFSRPS(0.054)MS(0.931)PT(0.014)PLDR;MSCFS(0.083)RPS(0.301)MS(0.517)PT(0.099)PLDR;MS(0.012)CFS(0.049)RPS(0.068)MS(0.859)PT(0.011)PLDR 96.561 0.0044507 111543000 58201 114439 104194 110394 125472 98672 103739 85871 96115 92416 TRUE FALSE 62656.91331 108756.1257 107667.776 101374.4571 120545.3388 102427.0321 90117.94469 97094.63454 104474.909 89400.47349 0.700856616 1.21650503 1.20433116 1.133936467 1.348374725 1.145710175 1.008025362 1.086063985 1.168616953 1 16.44799485 -4.756428788 24.99748723 1.151910432 0.700855922 0.6534672 0.097095171 99.31687658 495428.4843 0.025094225 0.203052689 1.75E-05 4.756428788 -0.451054511 MSCFSRPSMSPT(ph)PLDR ddPTM_A459_MK2206_30min_R2 1 MSCFSRPSMSPTPLDR 16 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MSCFS(0.003)RPS(0.046)MS(0.137)PT(0.815)PLDR 82.529 0.027547 66547000 26956 45244 37927 34498 50934 50210 37444 33399 51677 34331 TRUE FALSE 29019.77209 42997.24875 39191.46725 31679.40305 48934.07524 52120.77673 32527.55782 37764.36398 56171.77205 33210.78228 0.873805737 1.294677385 1.180082629 0.953889095 1.473439404 1.569393226 0.979427631 1.137111546 1.691371542 1 15.01936409 -4.757702321 24.88792261 1.254110042 0.873805161 0.180163571 0.242832427 185.5030325 1235214.999 0.060256097 0.436842256 1.75E-05 4.757702321 -0.380304881 MSDT(ph)GSPGMQR ddPTM_A459_MK2206_30min_R1 4 MSDTGSPGMQR 11 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 MSDT(0.633)GS(0.367)PGMQR;MS(0.026)DT(0.686)GS(0.288)PGMQR;MS(0.003)DT(0.499)GS(0.499)PGMQR;MS(0.075)DT(0.462)GS(0.462)PGMQR 140.14 0.0025973 65299300 14669.1 14422.3 14499.2 12060.6 16390.6 13452.2 14642.6 13688.9 12403 11336.2 TRUE FALSE 13421.41601 13483.40565 13515.0347 12989.5095 15737.72769 14213.85194 13665.81887 13569.21939 13692.33623 12740.61404 1.05343557 1.058301084 1.060783621 1.019535594 1.235240911 1.115633194 1.072618543 1.065036532 1.074699869 1 13.63714719 -1.540392416 21.81305719 1.08036124 0.000162153 0 0.061082963 0 0 0.014315649 0 0.028814268 1.540392416 -1.080199087 MSDT(ph)GSPGMQR ddPTM_A459_MK2206_30min_R2 1 MSDTGSPGMQR 11 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 MS(0.018)DT(0.59)GS(0.392)PGMQR 120.53 0.011001 46960000 41046 51079 47024 48477 51929 43335 52774 37801 41584 45295 TRUE FALSE 44188.51332 48542.49114 48591.75669 44516.27403 49890.00654 44984.14379 45844.71041 42741.72049 45200.90115 43817.02786 1.008478107 1.107845363 1.10896971 1.01595832 1.138598599 1.026636127 1.046276132 0.975459144 1.031583002 1 15.41920401 -7.250747067 1.992512681 1.005402457 1.075437748 0.322013322 0.042266806 0.378805245 2.937728146 0.02044092 0.013112038 5.61E-08 7.250747067 0.070035291 MSDTGS(ph)PGMQR ddPTM_A459_MK2206_30min_R1 1 MSDTGSPGMQR 11 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 MSDT(0.009)GS(0.99)PGMQR 110.64 0.033032 3669700 2909.1 3142.9 3036.5 2647.3 2969.4 2951.2 3118.6 2948 2559.1 2657.2 TRUE FALSE 2661.665769 2938.296639 2830.39084 2851.195505 2851.12251 3118.294394 2910.563884 2922.225947 2825.127603 2986.393997 0.891264104 0.983894503 0.947762031 0.954728515 0.954704072 1.044167112 0.974608135 0.9785132 0.945999626 1 11.5441888 -6.551663292 24.9998276 0.987880939 0.948377242 0.311041162 0.031459617 285.9790716 248375.3247 0.010241409 0.010241561 2.81E-07 6.551663292 -0.039503696 MSDTGS(ph)PGMQR ddPTM_A459_MK2206_30min_R2 3 MSDTGSPGMQR 11 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 MS(0.001)DT(0.14)GS(0.86)PGMQR;MSDT(0.296)GS(0.704)PGMQR;MS(0.002)DT(0.033)GS(0.964)PGMQR 150.09 0.00061975 68233100 110286 120487 120170 127477 134447 121941 129633 99932 112831 130841 TRUE FALSE 118729.581 114503.7908 124176.4078 117061.7213 129167.9352 126581.5502 112612.0314 112993.4555 122644.8364 126571.6689 0.938042312 0.904655772 0.981075851 0.924865117 1.020512223 1.000078069 0.88970962 0.892723123 0.968975423 1 16.94959499 -5.950894064 0.003750078 1.891783621 1.63E-07 0.058686011 0.044470701 144755.1975 132.3497168 32809.90451 33958.1915 1.12E-06 5.950894064 -1.891783458 MSES(ph)PTPCSGSSFEETEALVNTAAK ddPTM_A459_MK2206_30min_R1 7 MSESPTPCSGSSFEETEALVNTAAK 25 0 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 MS(0.118)ES(0.736)PT(0.146)PCSGSSFEETEALVNTAAK;MS(0.144)ES(0.733)PT(0.122)PCS(0.001)GSSFEETEALVNTAAK;MS(0.037)ES(0.919)PT(0.037)PCS(0.003)GS(0.003)S(0.001)FEETEALVNTAAK;MS(0.171)ES(0.658)PT(0.171)PCSGSSFEETEALVNTAAK;MS(0.067)ES(0.85)PT(0.082)PCS(0.001)GSSFEETEALVNTAAK;MS(0.036)ES(0.916)PT(0.048)PCSGSSFEETEALVNTAAK;MS(0.037)ES(0.911)PT(0.052)PCSGSSFEETEALVNTAAK 239.25 3.93E-45 263244200 40848.1 41784.5 40708.1 36145.1 43851.3 37771.2 41575.5 39299.7 36996.2 34469.4 TRUE FALSE 37373.75459 39064.32146 37944.94759 38929.00186 42104.60986 39909.7727 38802.07425 38956.10687 40842.08738 38739.7295 0.964739689 1.008378787 0.979484061 1.004885743 1.086858644 1.030202668 1.001609323 1.005585412 1.054268781 1 15.24152626 -6.006690851 24.59256371 1.030214375 0.987546338 0.370224212 0.026728385 292.4761135 1075020.997 0.00783065 0.011153686 9.85E-07 6.006690851 -0.042668037 MSES(ph)PTPCSGSSFEETEALVNTAAK ddPTM_A459_MK2206_30min_R2 8 MSESPTPCSGSSFEETEALVNTAAK 25 0 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 MS(0.074)ES(0.85)PT(0.074)PCS(0.001)GS(0.001)SFEETEALVNTAAK;MS(0.019)ES(0.805)PT(0.176)PCSGSSFEETEALVNTAAK;MS(0.368)ES(0.462)PT(0.168)PCS(0.001)GSSFEETEALVNTAAK;MS(0.229)ES(0.737)PT(0.033)PCS(0.001)GSSFEETEALVNTAAK;MS(0.146)ES(0.677)PT(0.177)PCS(0.001)GSSFEETEALVNTAAK;MS(0.054)ES(0.748)PT(0.199)PCSGSSFEETEALVNTAAK;MS(0.057)ES(0.66)PT(0.278)PCS(0.005)GSSFEETEALVNTAAK;MS(0.062)ES(0.833)PT(0.076)PCS(0.004)GS(0.02)S(0.005)FEETEALVNTAAK 158.74 1.11E-12 110028200 437070 518098 501650 579484 531407 492878 584512 460824 469061 513572 TRUE FALSE 470532.4152 492370.0067 518374.7606 532138.3035 510541.2911 511634.8177 507764.8723 521055.279 509859.0779 496814.1877 0.947099392 0.991054642 1.043397659 1.071101262 1.027630256 1.029831334 1.022041811 1.048793074 1.026257081 1 18.92234685 -4.985996223 2.813124867 1.035795702 0.946393037 0.700891144 0.017917547 0.158585531 2.281935055 0.004724717 0.02646454 1.03E-05 4.985996223 -0.089402664 MSESPT(ph)PCSGSSFEETEALVNTAAK ddPTM_A459_MK2206_30min_R2 3 MSESPTPCSGSSFEETEALVNTAAK 25 0 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 MS(0.05)ES(0.21)PT(0.719)PCS(0.02)GS(0.001)SFEETEALVNTAAK;MS(0.05)ES(0.426)PT(0.471)PCS(0.032)GS(0.01)S(0.01)FEET(0.001)EALVNTAAK;MS(0.011)ES(0.211)PT(0.77)PCS(0.005)GS(0.001)SFEETEALVNTAAK 122.34 1.04E-07 25341000 157143 187495 180104 210206 190696 174001 216310 167181 156795 197399 TRUE FALSE 169173.9889 178184.2709 186108.5775 193031.4974 183208.3169 180622.73 187908.2372 189032.1307 170432.7457 190957.8868 0.885923026 0.933107681 0.974605347 1.010858994 0.959417387 0.945877298 0.984029727 0.989915284 0.892514829 1 17.54289498 -4.925204049 2.616463434 0.969875818 0.880979198 0.408220928 0.031512484 0.35233696 3.973749696 0.008153357 0.06061277 1.19E-05 4.925204049 -0.08889662 MSIS(ph)EGTVSDK ddPTM_A459_MK2206_30min_R2 1 MSISEGTVSDK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 MS(0.015)IS(0.983)EGT(0.002)VSDK 124.39 0.0035881 4111100 41173 44929 39058 58846 59747 43692 51623 42053 38540 42971 TRUE FALSE 44325.23654 42697.89119 40360.17423 54038.09356 57401.03258 45354.72968 44844.83809 47549.47149 41892.13954 41568.85979 1.066308693 1.027160509 0.970923293 1.29996574 1.380866179 1.091074663 1.078808471 1.143872402 1.007776969 1 15.34321556 -10.85779045 3.467021065 0.999390959 1.123321824 0.076543775 0.122494585 27059708.94 37602160.16 161135.6462 0.033466362 1.39E-11 10.85779045 0.123930865 MSPAS(ph)PIDDIER ddPTM_A459_MK2206_30min_R1 2 MSPASPIDDIER 12 0 B4DWJ3;Q96CJ1-2;Q96CJ1 B4DWJ3 EAF2 ELL-associated factor 2 1 MS(0.001)PAS(0.999)PIDDIER;MSPAS(1)PIDDIER 192.4 0.00014892 12683300 3580.6 3462.6 3143.4 2421.5 3315.6 3731.7 3689.7 2874.9 3281 3435.5 TRUE FALSE 3276.051168 3237.184111 2930.034766 2608.00435 3183.532631 3942.985629 3443.566845 2849.765052 3622.071691 3861.115677 0.84847268 0.838406404 0.758857028 0.675453565 0.824511073 1.021203704 0.891857984 0.738067774 0.938089401 1 11.91480206 -6.532141567 24.99027774 0.902405411 0.77879981 0.368743798 0.08456631 255.7975876 690114.2498 0.029238049 0.02927432 2.94E-07 6.532141567 -0.1236056 MSPAS(ph)PIDDIER ddPTM_A459_MK2206_30min_R2 2 MSPASPIDDIER 12 0 B4DWJ3;Q96CJ1-2;Q96CJ1 B4DWJ3 EAF2 ELL-associated factor 2 1 MS(0.008)PAS(0.992)PIDDIER;MSPAS(1)PIDDIER 124.81 0.0029656 6199400 18990.5 22259.5 23143 24897 22082 22203 21880 19259.2 18494.3 26832 TRUE FALSE 20444.42728 21154.1256 23914.57607 22862.83546 21214.94973 23047.95072 19007.12972 21776.44357 20102.90078 25956.47404 0.7876427 0.814984561 0.92133377 0.880814375 0.817327873 0.887946132 0.732269325 0.838960004 0.774485038 1 14.6638068 MSPNET(ph)LFLESTNK ddPTM_A459_MK2206_30min_R1 1 MSPNETLFLESTNK 14 0 Q9HB90;Q9NQL2 Q9HB90 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D 1 MSPNET(0.734)LFLES(0.264)T(0.002)NK 209.11 1.27E-05 42440000 2619.3 2561.6 3708.3 2673 2259.7 2181 2423.7 2559.1 2919.4 2411.1 TRUE FALSE 2396.514781 2394.839374 3456.590928 2878.874923 2169.691364 2304.486335 2262.019395 2536.726059 3222.882077 2709.805271 0.884386345 0.88376807 1.275586466 1.062391809 0.800681653 0.850425069 0.834753486 0.936128542 1.18934084 1 11.40397347 -1.530257645 20.9524084 0.966558943 0.002892277 0 0.151109143 0 0 0.036797613 0 0.029494589 1.530257645 -0.963666665 MSPNETLFLES(ph)TNK ddPTM_A459_MK2206_30min_R1 4 MSPNETLFLESTNK 14 0 Q9HB90;Q9NQL2 Q9HB90 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D 1 MSPNETLFLES(0.993)T(0.007)NK;MSPNETLFLES(0.5)T(0.5)NK;MSPNETLFLES(0.756)T(0.244)NK;MSPNET(0.001)LFLES(0.953)T(0.046)NK 262.24 5.88E-36 73792600 11037.8 12546.5 13770.9 11126.2 10831.6 8853.2 11088.9 11307.5 12463.2 11380.5 TRUE FALSE 10098.97715 11729.72057 12836.16968 11983.14185 10400.15444 9354.460533 10349.17971 11208.63972 13758.79424 12790.40226 0.789574631 0.917072062 1.003578263 0.936885456 0.813121763 0.731365624 0.809136375 0.876332073 1.075712395 1 13.64277402 -8.221451529 7.348666401 1.03768561 0.861086603 0.461968392 0.076940526 0.221927222 35.74970139 0.061223843 0.022356514 6.01E-09 8.221451529 -0.176599008 MSPNETLFLES(ph)TNK ddPTM_A459_MK2206_30min_R2 2 MSPNETLFLESTNK 14 0 Q9HB90;Q9NQL2 Q9HB90 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D 1 MSPNETLFLES(0.761)T(0.239)NK;MSPNETLFLES(0.79)T(0.21)NK 195.28 0.00012407 35361000 45097 55697 59176 48491 60819 49595 50474 42643 54077 54163 TRUE FALSE 48549.66099 52931.16797 61148.8983 44529.13018 58430.94047 51482.37248 43846.70317 48216.58652 58780.51971 52395.66575 0.926596891 1.010220353 1.167060241 0.849862857 1.115186526 0.982569297 0.836838363 0.920239982 1.121858438 1 15.67715985 -6.996054877 24.98237632 0.95546128 1.01658399 0.030634944 0.106434637 344.7631168 2183181.411 0.037268854 0.032724576 1.01E-07 6.996054877 0.06112271 MSPNETLFLEST(ph)NK ddPTM_A459_MK2206_30min_R1 1 MSPNETLFLESTNK 14 0 Q9HB90;Q9NQL2 Q9HB90 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D 1 MSPNETLFLES(0.128)T(0.872)NK 254.72 1.16E-27 24703000 3405.8 3957.1 4102 3503.1 2968.4 2745.3 3070.5 3752.6 3458.3 2811.1 TRUE FALSE 3116.118825 3699.492071 3823.567669 3772.909369 2850.162342 2900.736514 2865.672547 3719.791414 3817.802661 3159.360291 0.986313221 1.170962388 1.210234768 1.194200415 0.902132736 0.918140461 0.907042022 1.177387532 1.208410029 1 11.62541675 -6.240879953 24.57004562 1.017095405 1.14759497 0.212845646 0.114175749 1116.038431 1333747.823 0.037232561 0.048002247 5.74E-07 6.240879953 0.130499565 MSPS(ph)KSPFLPSMK ddPTM_A459_MK2206_30min_R2 1 MSPSKSPFLPSMK 13 1 A0A3F2YNW7;Q8NFD5;Q8NFD5-2;Q8NFD5-3;A0A1B0GV63;A0A1B0GWJ2;A0A1B0GTJ8;A0A1B0GVK1;H0Y7H8;Q8NFD5-4 A0A3F2YNW7 ARID1B AT-rich interactive domain-containing protein 1B 1 MS(0.045)PS(0.913)KS(0.042)PFLPSMK 64.827 0.04276 10068000 35923 40573 38982 43060 49613 29578 45819 37697 37975 45707 TRUE FALSE 38673.2925 38558.20382 40281.64042 39541.86026 47664.94433 30703.61152 39802.91026 42624.12733 41277.99686 44215.58433 0.874652978 0.872050079 0.911028114 0.894296906 1.078012313 0.694407006 0.900200933 0.964006876 0.93356217 1 15.43226733 -7.729742259 6.064821121 0.961858068 0.889019749 0.138249291 0.087706089 0.38379483 40.56069103 0.043455505 0.023846972 1.86E-08 7.729742259 -0.072838319 MSQPGSPS(ph)PK ddPTM_A459_MK2206_30min_R1 4 MSQPGSPSPK 10 0 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;F5GWX5;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y4X2;A0A2R8Y7I0;A0A2R8Y7M9 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 MSQPGS(0.068)PS(0.932)PK;MSQPGS(0.232)PS(0.768)PK;MSQPGS(0.224)PS(0.776)PK;MSQPGS(0.236)PS(0.764)PK 195.72 5.55E-05 520100000 44072.5 47566.8 46471.4 42220.3 39808.5 36860.7 44183.9 43914.5 42344.5 37710.2 TRUE FALSE 40323.90244 44470.19267 43317.05084 45472.11482 38222.84315 38947.72098 41236.47265 43530.56016 46746.36231 42382.02427 0.951438803 1.049270143 1.022061867 1.072910405 0.9018645 0.918967927 0.972970814 1.027099599 1.102976158 1 15.37116488 -7.952267535 5.152168792 1.055925594 0.986302427 0.196847049 0.055834712 0.312155244 18.43377971 0.035116848 0.015882621 1.12E-08 7.952267535 -0.069623167 MSQPGSPS(ph)PK ddPTM_A459_MK2206_30min_R2 5 MSQPGSPSPK 10 0 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;F5GWX5;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y4X2;A0A2R8Y7I0;A0A2R8Y7M9 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 MSQPGS(0.027)PS(0.973)PK;MSQPGS(0.005)PS(0.995)PK;MS(0.003)QPGS(0.11)PS(0.887)PK;MSQPGS(0.002)PS(0.998)PK;MSQPGS(0.018)PS(0.982)PK 157.03 0.00049893 857950000 1425140 1616890 1540540 1519990 1579360 1228790 1967680 1495170 1420610 1790570 TRUE FALSE 1534249.814 1536597.594 1591900.835 1395801.955 1517346.391 1275552.465 1709321.252 1690593.853 1544172.09 1732143.848 0.885751964 0.887107382 0.919035008 0.805823348 0.875993292 0.736401002 0.986824076 0.976012388 0.891480284 1 20.72412731 -7.309633028 24.9995703 0.961580261 0.855376876 0.497487454 0.055003019 365.3805021 189533.0678 0.023095536 0.015571032 4.90E-08 7.309633028 -0.106203385 MSRRSADAS(ph)QRSLAYNR ddPTM_A459_MK2206_30min_R2 1 MSRRSADASQRSLAYNR 17 3 J3KNG8;Q8TF40;A0A087WX11;Q8TF40-3;Q8TF40-2 J3KNG8 FNIP1 Folliculin-interacting protein 1 1 MSRRSADAS(0.487)QRS(0.487)LAY(0.026)NR 79.337 0.031865 6460200 0 1846.4 1030.5 1866.4 3658.1 813.47 1332.5 1740.6 2200 0 TRUE FALSE 0 1754.710461 1064.856356 1713.90915 3514.464614 844.4271709 1157.541149 1968.102396 2391.352023 0 0 MSS(ph)PEDDSDTKR ddPTM_A459_MK2206_30min_R1 3 MSSPEDDSDTKR 12 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 MSS(0.985)PEDDS(0.014)DTKR;MS(0.287)S(0.713)PEDDSDTKR;MS(0.226)S(0.774)PEDDSDTKR 190.35 0.00024367 15371500 8380.5 8618.4 8809.9 7780.4 8177.4 6575.7 7287.7 8027.3 7059.3 6620.3 TRUE FALSE 7667.694467 8057.340594 8211.908534 8379.647756 7851.676842 6948.010451 6801.55083 7957.118162 7793.139497 7440.472745 1.030538614 1.082907077 1.103681018 1.12622518 1.055265856 0.933813037 0.914128855 1.069437176 1.047398433 1 12.86117857 -6.552591519 9.824025993 0.992514153 1.087395433 0.453156574 0.048581726 0.359562525 113.9556357 0.017516651 0.017577625 2.80E-07 6.552591519 0.094881279 MSS(ph)PLADAK ddPTM_A459_MK2206_30min_R1 3 MSSPLADAK 9 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 MS(0.03)S(0.97)PLADAK;MS(0.028)S(0.972)PLADAK;MS(0.003)S(0.997)PLADAK 126.03 0.0049031 36572300 17578.9 18166.2 17349.8 15468.9 16076.7 13664.8 14970.4 14496.2 14279.5 13169.4 TRUE FALSE 16083.72224 16983.57708 16172.14392 16660.31736 15436.331 14438.48917 13971.75193 14369.46125 15763.90512 14800.9247 1.086670095 1.147467299 1.092644159 1.12562679 1.042930176 0.975512643 0.943978313 0.970848886 1.06506218 1 13.85339969 -6.482684246 3.101278766 0.986714505 1.113939475 0.746057436 0.033415565 0.12681184 2.45195574 0.011496692 0.012561639 3.29E-07 6.482684246 0.12722497 MSS(ph)PLADAK ddPTM_A459_MK2206_30min_R2 2 MSSPLADAK 9 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 MS(0.068)S(0.932)PLADAK;MS(0.04)S(0.96)PLADAK 136.02 0.0026759 11394600 160333 170204 153083 168791 161465 135212 178375 134683 132497 171862 TRUE FALSE 172608.2178 161751.9169 158186.7108 155000.2354 155125.0728 140357.5874 154954.1482 152286.5305 144021.3496 166254.157 1.038218959 0.972919533 0.951475221 0.932308931 0.933059814 0.844235055 0.932031722 0.915986302 0.866272171 1 17.34303089 -4.549889873 0.788756736 0.909182074 1.152860735 0.471899966 0.039669252 2.90598064 1.079953636 0.014460821 0.677398975 2.82E-05 4.549889873 0.243678662 MSTSQNS(ph)IPFEHHGK ddPTM_A459_MK2206_30min_R2 1 MSTSQNSIPFEHHGK 15 0 P48730-2 P48730-2 CSNK1D Casein kinase I isoform delta 1 MS(0.006)T(0.004)S(0.005)QNS(0.985)IPFEHHGK 76.586 0.019024 3280200 19947 19368 25345 23188 22948 21885 24533 18946 22792 25823 TRUE FALSE 21474.15766 18406.21328 26189.98965 21293.46623 22046.94622 22717.84901 21311.78763 21422.30725 24774.40696 24980.39762 0.859640346 0.736826273 1.048421648 0.852407017 0.882569867 0.909427038 0.853140448 0.857564702 0.991753908 1 14.60850882 -14.52287872 0.091158706 1.384438663 0.791037317 0.219415994 0.076692179 349.7114472 2.201647611 25.80372443 1.739441981 3.00E-15 14.52287872 -0.593401347 MSVQPT(ph)VSLGGFEITPPVVLR ddPTM_A459_MK2206_30min_R1 1 MSVQPTVSLGGFEITPPVVLR 21 0 E5RI98;P06748-2;P06748;P06748-3 E5RI98;P06748-2 NPM1 Nucleophosmin 1 MSVQPT(0.988)VS(0.012)LGGFEITPPVVLR 242.9 5.85E-31 26562000 5148.6 5759.5 4963.1 4607.7 5647.5 5482.4 5528.5 4854.3 4453.2 3964.3 TRUE FALSE 4710.684534 5384.555503 4626.2186 4962.585852 5422.548116 5792.80875 5159.703852 4811.859367 4916.126076 4455.427413 1.057291276 1.208538487 1.038333289 1.113829357 1.217065752 1.300169033 1.158071577 1.079999497 1.103401676 1 12.12134812 -8.444469362 1.360364114 1.00633399 1.156810796 0.271864437 0.075119426 0.59805566 2.39735253 0.076233676 0.023218299 3.59E-09 8.444469362 0.150476807 MSVQPTVS(ph)LGGFEITPPVVLR ddPTM_A459_MK2206_30min_R1 1 MSVQPTVSLGGFEITPPVVLR 21 0 E5RI98;P06748-2;P06748;P06748-3 E5RI98;P06748-2 NPM1 Nucleophosmin 1 MSVQPT(0.189)VS(0.679)LGGFEIT(0.131)PPVVLR 185.23 1.66E-15 28110000 4837.6 5203.6 5012.8 3727 4943.3 4993.5 4805.2 4044.2 4282.7 3402.4 TRUE FALSE 4426.136717 4864.844694 4672.545102 4014.054186 4746.397893 5276.227655 4484.653876 4008.841986 4727.901991 3823.914999 1.15748826 1.272215699 1.221927031 1.049723696 1.241240429 1.379797317 1.172791204 1.048360643 1.236403527 1 11.90083474 -9.201445998 0.608194601 0.994069162 1.211277116 0.281220436 0.094534165 3.351761332 1.859402036 0.158405208 0.041309549 6.29E-10 9.201445998 0.217207954 MSYEGPTAEVVEVSAGGDLSQAAS(ph)PTGASR ddPTM_A459_MK2206_30min_R1 1 MSYEGPTAEVVEVSAGGDLSQAASPTGASR 30 0 O15061 O15061 SYNM Synemin 1 MSYEGPTAEVVEVSAGGDLS(0.003)QAAS(0.492)PT(0.492)GAS(0.014)R 144.3 4.34E-19 4610200 891.35 1100.7 959.05 760.71 915.17 794.7 1014.8 824.73 892.78 835.27 TRUE FALSE 815.5360018 1029.04423 893.9523581 819.300016 878.716841 839.6952272 947.1045436 817.5194726 985.5876758 938.7495536 0.868747153 1.096186119 0.952279929 0.872756757 0.936050342 0.894482691 1.008900127 0.870860039 1.049894162 1 9.874596506 -10.25540168 5.934092685 1.000000002 0.949470234 0.037947149 0.075455141 1.42E-09 2.63E-10 0.069895447 0.016952136 5.55E-11 10.25540168 -0.050529767 MT(ph)AYIT(ph)ELSDMVPTCSALARKPDK ddPTM_A459_MK2206_30min_R1 1 MTAYITELSDMVPTCSALARKPDK 24 2 P27540-3;P27540-4;P27540;A6NGV6;P27540-2 P27540-3 ARNT Aryl hydrocarbon receptor nuclear translocator 2 MT(0.872)AY(0.144)IT(0.808)ELS(0.129)DMVPT(0.023)CS(0.023)ALARKPDK 49.973 0.033485 8369200 1447.2 1650.6 1607.1 1234.9 1357.2 1516.3 1947.8 1319 2519.3 3330.1 TRUE FALSE 1324.10804 1543.14564 1498.01453 1330.012212 1303.13985 1602.151596 1817.865816 1307.468122 2781.19025 3742.657929 0.353788154 0.412312765 0.400254193 0.355365689 0.348185668 0.428078554 0.485715192 0.349342138 0.743105649 1 11.86984748 -8.466315713 2.867285515 0.99808942 0.39351281 0.952113853 0.044773074 0.04640213 0.824582168 0.044267456 0.011900268 3.42E-09 8.466315713 -0.604576609 down MT(ph)GSAPPPSPTPNK ddPTM_A459_MK2206_30min_R2 1 MTGSAPPPSPTPNK 14 0 Q9UBW7 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 1 MT(0.964)GS(0.004)APPPS(0.031)PT(0.001)PNK 133.15 0.0076401 3567800 25208 28592 23009 26852 28930 25106 29088 21988 19806 25853 TRUE FALSE 27137.94386 27172.16286 23776.10858 24658.1057 27794.06284 26061.42642 25268.71066 24861.9071 21528.69008 25009.41873 1.085108941 1.086477185 0.950686173 0.985952771 1.111343816 1.04206446 1.010367771 0.994101757 0.860823289 1 14.61018391 -7.912538095 2.727552973 0.929871622 1.039253226 0.368045025 0.055884493 0.298862005 4.337930734 0.040423301 0.015772924 1.22E-08 7.912538095 0.109381604 MT(ph)ISQQEFGR ddPTM_A459_MK2206_30min_R2 1 MTISQQEFGR 10 0 H0Y3Y9;Q5VWC4;P55036 H0Y3Y9 PSMD4 26S proteasome non-ATPase regulatory subunit 4 1 MT(0.942)IS(0.058)QQEFGR 101.56 0.037961 8751400 18126 20816 25692 32332 26887 24682 24971 20306 22732 22797 TRUE FALSE 19513.7405 19782.30771 26548.55846 29690.37218 25831.28128 25621.29081 21692.2777 22960.06392 24709.18827 22053.13576 0.884851058 0.897029245 1.203845056 1.346310679 1.171320105 1.161798081 0.983636882 1.041124681 1.120438769 1 14.42869619 -5.249820023 23.5640907 1.135343325 0.890940034 0.469407046 0.100846426 319.9167415 648784.1215 0.028635193 0.074172798 5.63E-06 5.249820023 -0.244403292 MT(ph)KGT(ph)S(ph)SFGKR ddPTM_A459_MK2206_30min_R2 1 MTKGTSSFGKR 11 2 P61927;D6R9X9;D6RG19 P61927 RPL37 60S ribosomal protein L37;Ribosomal protein L37 3 MT(1)KGT(0.999)S(0.998)S(0.003)FGKR 90.793 0.016135 0 6891.1 7201.7 14458 6788 20563 16068 14430 13155 17483 7427.6 TRUE FALSE 7418.687914 6844.07405 14940.0225 6233.398686 19755.5933 16679.479 12535.32367 14874.40367 19003.63974 7185.23802 1.03249021 0.952518766 2.079266193 0.867528489 2.749469571 2.321353719 1.744594073 2.070133742 2.64481701 1 12.81082023 -5.484286127 1.028646584 2.085427148 0.876305045 0.272520382 0.592700828 0.953971683 1.63309976 0.208608478 0.98998912 3.28E-06 5.484286127 -1.209122102 MT(ph)NNEDSLSPTSSTLSNLELDAAEKDR ddPTM_A459_MK2206_30min_R1 1 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MT(0.558)NNEDS(0.176)LS(0.176)PT(0.079)S(0.008)S(0.002)T(0.001)LSNLELDAAEKDR 60.979 0.0067223 8820400 1279.9 1411 1533.2 1442.7 960.02 1164.4 1103.8 1311.3 1139.5 963.56 TRUE FALSE 1171.037784 1319.143644 1429.130656 1553.817004 921.7803705 1230.327322 1030.167516 1299.835442 1257.955103 1082.933087 1.08135747 1.2181211 1.319685096 1.434822726 0.851188667 1.136106502 0.951275317 1.200291558 1.161618495 1 10.08072839 -6.254968049 24.99981467 1.05945575 1.264268944 0.400983053 0.127477951 588.273366 2272596.616 0.038963731 0.049062577 5.56E-07 6.254968049 0.204813194 MT(ph)NSPVLPVGSTTNGSR ddPTM_A459_MK2206_30min_R2 1 MTNSPVLPVGSTTNGSR 17 0 P37275-3;P37275-4;P37275-5;P37275;P37275-2 P37275-3 ZEB1 Zinc finger E-box-binding homeobox 1 1 MT(0.933)NS(0.067)PVLPVGSTTNGSR 145.8 0.0006476 0 19358 15104 16977 21438 15577 18282 21997 18206 17857 24145 TRUE FALSE 20840.06336 14353.95732 17543.00471 19686.44682 14965.36871 18977.73432 19108.76748 20585.58671 19410.16958 23357.15063 0.892234832 0.614542311 0.751076404 0.842844538 0.640718937 0.812502117 0.818112097 0.881339811 0.831016158 1 14.51157667 -8.389268957 0.532288002 0.999373551 0.741063645 0.434022799 0.082361042 0.814664178 0.573221454 0.086871666 0.042719505 4.08E-09 8.389268957 -0.258309907 MT(ph)TDINALK ddPTM_A459_MK2206_30min_R1 1 MTTDINALK 9 0 F8VZ81;Q9Y2I9-3;Q9Y2I9-2;Q9Y2I9 F8VZ81 TBC1D30 TBC1 domain family member 30 1 MT(0.99)T(0.01)DINALK 118.74 0.016781 0 1267.8 999.85 1136.2 1057.1 1070.8 777.75 1131.1 1182.1 987.98 884.83 TRUE FALSE 1159.966953 934.7595833 1059.07791 1138.518025 1028.147769 821.7855329 1055.646383 1171.765024 1090.684057 994.4494205 1.166441378 0.939977 1.064989217 1.144872732 1.033886437 0.826372378 1.061538537 1.178305302 1.096771775 1 9.957754185 -10.07172693 0.00253757 0.653090461 1.43878234 0.003486728 0.10298191 2677880.492 1554.154766 243599.955 237615.501 8.48E-11 10.07172693 0.785691879 MTDQEAIQDLWQWR ddPTM_A459_MK2206_30min_R1 4 MTDQEAIQDLWQWR 14 0 P06748-2;P06748 P06748-2 NPM1 Nucleophosmin 0 ;;; 276.95 3.08E-52 428890000 10288.5 11191 11095.9 9593.1 12051.7 10704.9 11013 10280.7 8854.6 8149.4 FALSE TRUE 9413.409048 10462.46387 10342.74122 10331.96222 11571.65527 11311.00219 10278.34286 10190.81692 9775.067356 9159.009197 1.027775914 1.142313938 1.129242367 1.128065493 1.263417802 1.234959147 1.122211218 1.11265495 1.067262533 1 13.16097582 -8.345249022 1.457315086 1.003415426 1.155235244 0.385283897 0.060782017 0.430017865 1.859483056 0.062208411 0.018878038 4.52E-09 8.345249022 0.151819818 MTDQEAIQDLWQWR ddPTM_A459_MK2206_30min_R2 3 MTDQEAIQDLWQWR 14 0 P06748-2;P06748 P06748-2 NPM1 Nucleophosmin 0 ;; 193 0.0010512 14961700 43631.2 55990 41806.8 55257.2 52793 48950.6 55694 42905.9 45692.5 42525.4 FALSE TRUE 46971.63822 53209.61802 43200.61785 50742.51 50720.08156 50813.44938 48381.3109 48513.84845 49666.75106 41137.79968 1.141812119 1.293448323 1.050144105 1.23347652 1.232931317 1.235200953 1.176079209 1.179301004 1.207326387 1 15.32817701 -10.99082435 2.735129269 0.993149592 1.195580627 0.46703372 0.062293787 8560295.521 9203575.031 446894.9995 0.015826397 1.02E-11 10.99082435 0.202431036 MTEEEVEMLVAGHEDS(ph)NGCINYEELVR ddPTM_A459_MK2206_30min_R1 1 MTEEEVEMLVAGHEDSNGCINYEELVR 27 0 P60660-2;G8JLA2;F8VZU9;F8W180;F8VXL3 P60660-2 MYL6 Myosin light polypeptide 6 1 MTEEEVEMLVAGHEDS(1)NGCINYEELVR 107.04 3.65E-09 2977800 368.41 484.5 354.43 399.46 417.26 315.56 360.92 358.26 268.8 237.75 TRUE FALSE 337.0747949 452.9589619 330.3722791 430.2264784 400.6396506 333.4267345 336.8436853 355.1277706 296.7427219 267.2042649 1.261487331 1.695178638 1.236403465 1.610103336 1.499375958 1.247834628 1.260622413 1.329049784 1.110546353 1 8.061799225 -7.972235944 0.581471774 1.000434065 1.472935149 0.505954672 0.144448479 0.613486568 0.466864159 0.137422318 0.073547297 1.07E-08 7.972235944 0.472501085 MTFDLT(ph)KIT(ph)KTSSSFEVRT(ph)WDPEGVIFYGDTNPK ddPTM_A459_MK2206_30min_R1 1 MTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPK 34 3 I3L1G4;I3L1C1;I3L4B9;I3L2F1;I3L1J1;B4DYU0;I3L2X4;I3L145 I3L1G4 SHBG 3 MT(0.303)FDLT(0.315)KIT(0.315)KT(0.315)S(0.315)S(0.315)S(0.315)FEVRT(0.773)WDPEGVIFY(0.03)GDT(0.004)NPK 42.355 0.019145 10674000 276.08 199.55 168.99 200.69 432.23 404.36 338.55 291.39 162.55 158.3 TRUE FALSE 252.5979462 186.5592587 157.5194296 216.1471786 415.0133638 427.2545138 315.9659472 288.842408 179.4476542 177.9113991 1.4197963 1.048607676 0.885381321 1.214914725 2.33269687 2.401501623 1.775973596 1.623518276 1.008634945 1 7.475015139 -6.029737939 22.90723761 1.762526688 1.100854886 0.253197031 0.45316323 306.09039 235782.2957 0.140488223 0.181786909 9.34E-07 6.029737939 -0.661671802 MTGS(ph)NSHIT(ph)ILTLNVNGLNSPIK ddPTM_A459_MK2206_30min_R2 1 MTGSNSHITILTLNVNGLNSPIK 23 0 O00370 O00370 LINE-1 retrotransposable element ORF2 protein;Reverse transcriptase;Endonuclease 2 MT(0.44)GS(0.493)NS(0.183)HIT(0.765)ILT(0.118)LNVNGLNS(0.001)PIK 45.596 0.039986 1957500 2406.6 8327.7 3222.5 9752 7397.7 10018 7007.5 5467.3 8111.6 3510.7 TRUE FALSE 2590.851146 7914.158528 3329.936542 8955.230405 7107.229128 10399.24201 6087.406832 6181.894882 8817.132306 3396.146147 0.762879757 2.330335088 0.980504489 2.636880163 2.092733593 3.062071407 1.792445487 1.820267626 2.596216984 1 11.72968283 -5.763145634 24.99999834 2.198723478 1.455149335 0.223495264 0.657441325 67.22547 985013.0482 0.172855261 0.272239431 1.73E-06 5.763145634 -0.743574142 MTGSAPPPS(ph)PTPNK ddPTM_A459_MK2206_30min_R1 6 MTGSAPPPSPTPNK 14 0 Q9UBW7 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 1 MTGSAPPPS(0.814)PT(0.186)PNK;MTGS(0.001)APPPS(0.979)PT(0.02)PNK;MTGS(0.001)APPPS(0.964)PT(0.035)PNK;MTGSAPPPS(0.983)PT(0.017)PNK;MTGSAPPPS(0.991)PT(0.009)PNK;MT(0.001)GSAPPPS(0.992)PT(0.007)PNK 192.46 1.98E-06 6054100 16413.9 16587.7 16326.06 12953.27 15450.39 14153.35 15728.72 13700.21 15092.71 13834.46 TRUE FALSE 15017.81161 15507.83772 15217.89253 13950.9331 14834.96825 14954.70045 14679.48579 13580.43051 16661.65121 15548.37735 0.965876456 0.997392677 0.978744739 0.897259745 0.954116813 0.961817437 0.944116898 0.873430725 1.071600646 1 13.92447641 -8.278201224 24.98678853 1.035800325 0.94839049 0.46437044 0.038283604 855.2545937 1274910.426 0.037103724 0.00968402 5.27E-09 8.278201224 -0.087409835 MTGSAPPPS(ph)PTPNK ddPTM_A459_MK2206_30min_R2 3 MTGSAPPPSPTPNK 14 0 Q9UBW7 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 1 MT(0.003)GS(0.038)APPPS(0.479)PT(0.479)PNK;MTGSAPPPS(0.5)PT(0.5)PNK;MTGSAPPPS(0.678)PT(0.322)PNK 169.4 9.87E-05 13107000 104881 104829 103242 113111 99808 83405 113873 89689 80170 102791 TRUE FALSE 112910.77 99623.3443 106684.0368 103869.4695 95889.03643 86579.03572 98921.33831 101411.6602 87143.04169 99436.93809 1.135501275 1.001874617 1.072881354 1.044576306 0.964320083 0.870692897 0.994814806 1.01985904 0.876364894 1 16.60149425 -6.238471684 3.911005533 0.952384451 1.062082728 0.489602333 0.055027411 0.203177908 7.059255033 0.01684864 0.021175316 5.77E-07 6.238471684 0.109698277 MTGSAPPPSPT(ph)PNK ddPTM_A459_MK2206_30min_R1 1 MTGSAPPPSPTPNK 14 0 Q9UBW7 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 1 MT(0.014)GS(0.001)APPPS(0.286)PT(0.7)PNK 146.84 0.0011459 5072800 2790.5 2905.8 3209.3 2554 2798.7 2949.8 2694 2271.3 2311.1 2455.1 TRUE FALSE 2553.153322 2716.631892 2991.461658 2750.709523 2687.221853 3116.815127 2514.288175 2251.442264 2551.347115 2759.256323 0.925304873 0.984552203 1.084155043 0.996902499 0.97389352 1.129585208 0.911219503 0.815959809 0.924650274 1 11.43006377 -7.49007398 24.50974541 0.894900946 1.015145356 0.340608873 0.068602567 485.8995167 363035.9031 0.028187938 0.018986143 3.24E-08 7.49007398 0.120244411 MTGSPT(ph)LVK ddPTM_A459_MK2206_30min_R2 1 MTGSPTLVK 9 0 B7ZBM3;Q8IVH2-3;Q8IVH2-2;Q8IVH2 B7ZBM3 FOXP4 Forkhead box protein P4 1 MTGS(0.026)PT(0.974)LVK 115 0.019421 6165400 49252 70417 51024 55149 52233 43345 48809 36646 44779 41600 TRUE FALSE 53022.77099 66920.19418 52725.11469 50643.15029 50182.06997 44994.52435 42400.31967 41435.75802 48673.79648 40242.59541 1.317578314 1.662919439 1.310181765 1.258446424 1.246988905 1.118082069 1.05361792 1.029649246 1.209509376 1 15.29643573 -6.034879123 0.922442887 1.074149563 1.498105562 0.678927279 0.104304661 0.346668291 0.602045218 0.045691793 0.097838216 9.23E-07 6.034879123 0.423955999 MTIS(ph)QQEFGR ddPTM_A459_MK2206_30min_R1 2 MTISQQEFGR 10 0 H0Y3Y9;Q5VWC4;P55036 H0Y3Y9 PSMD4 26S proteasome non-ATPase regulatory subunit 4 1 MTIS(1)QQEFGR;MTIS(1)QQEFGR 126.5 0.0034461 23482000 2585 2567.4 3133.5 2902.7 3372.3 2668.3 3089.4 2381 2140.3 1981.84 TRUE FALSE 2365.132176 2400.261793 2920.80675 3126.266457 3237.97415 2819.37684 2883.311763 2360.183168 2362.791844 2227.365301 1.061851944 1.07762377 1.311328119 1.4035715 1.45372389 1.265790052 1.294494334 1.059630033 1.060801227 1 11.12112247 -7.781197114 7.753636332 1.043827191 1.273830417 0.440064388 0.117029293 0.190574637 52.01489936 0.071401072 0.035505412 1.66E-08 7.781197114 0.230003227 MTNNEDS(ph)LSPTSSTLSNLELDAAEKDR ddPTM_A459_MK2206_30min_R1 1 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MT(0.102)NNEDS(0.39)LS(0.39)PT(0.09)S(0.021)S(0.005)T(0.002)LSNLELDAAEKDR 74.206 0.00028736 10121000 1661.4 1691 1989.1 1723.1 1758.2 1705.5 1790.1 1778.6 1633.2 1538.4 TRUE FALSE 1520.089206 1580.915593 1854.085434 1855.813461 1688.167171 1802.063936 1670.685695 1763.049888 1802.976984 1728.988606 0.879178266 0.914358595 1.072352604 1.073352047 0.976389992 1.042264784 0.966279181 1.019700119 1.042792866 1 10.75571265 -5.12868534 5.152636227 1.023184716 0.887716181 0.689616218 0.034447089 0.120377516 4.43632616 0.00910356 0.025877836 7.44E-06 5.12868534 -0.135468536 MTNNEDS(ph)LSPTSSTLSNLELDAAEKDR ddPTM_A459_MK2206_30min_R2 1 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MT(0.094)NNEDS(0.328)LS(0.328)PT(0.182)S(0.028)S(0.028)T(0.012)LSNLELDAAEKDR 60.288 0.0092067 5835000 16010 23466 22228 20291 26238 18447 17205 15316 19336 19524 TRUE FALSE 17235.73791 22300.71256 22969.07043 18633.16039 25207.76428 19149.01351 14945.96283 17317.85379 21017.81033 18886.93348 0.912574714 1.180748192 1.216135507 0.986563563 1.334666864 1.013876262 0.791338777 0.916922475 1.112822807 1 14.20510086 -6.991531836 24.99749538 0.94181353 1.13120286 0.270718294 0.132543103 233.5709672 689483.2912 0.04583772 0.040364071 1.02E-07 6.991531836 0.189389329 MTNNEDSLS(ph)PTSSTLSNLELDAAEKDR ddPTM_A459_MK2206_30min_R2 1 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MT(0.001)NNEDS(0.204)LS(0.563)PT(0.142)S(0.037)S(0.037)T(0.015)LSNLELDAAEKDR 77.062 7.15E-05 11400000 24618 26573 24896 25679 24824 26691 27447 19843 21337 25966 TRUE FALSE 26502.77301 25253.42346 25726.02021 23580.94356 23849.28503 27706.74471 23843.17593 22436.54823 23192.85369 25118.73155 1.055099974 1.00536221 1.024176725 0.938779234 0.949462157 1.103031204 0.949218948 0.893219795 0.923329016 1 14.61647599 -7.503974634 24.84809415 0.929208504 1.008240211 0.312638998 0.051053211 806.466296 1060046.621 0.021885838 0.014469528 3.13E-08 7.503974634 0.079031707 MTNNEDSLSPT(ph)SSTLSNLELDAAEKDR ddPTM_A459_MK2206_30min_R1 2 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MTNNEDSLS(0.013)PT(0.903)S(0.062)S(0.021)TLSNLELDAAEKDR;MTNNEDSLS(0.003)PT(0.982)S(0.014)S(0.001)TLSNLELDAAEKDR 142.23 2.00E-12 97028000 5928.4 6150 6640.8 5454.1 5898 4969.5 5952.9 5452.6 5268.8 4151.6 TRUE FALSE 5424.158449 5749.633882 6190.040998 5874.175727 5663.070171 5250.868795 5555.792903 5404.928493 5816.510615 4665.931551 1.162502791 1.232258515 1.326646336 1.258950257 1.213706225 1.125363443 1.190714618 1.158381437 1.246591501 1 12.18794943 -6.561032635 4.711372464 1.157295755 1.24888191 0.312620708 0.069853956 0.266748819 13.80283296 0.022869039 0.023350871 2.75E-07 6.561032635 0.091586155 MTNNEDSLSPT(ph)SSTLSNLELDAAEKDR ddPTM_A459_MK2206_30min_R2 3 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MTNNEDS(0.002)LS(0.04)PT(0.803)S(0.132)S(0.022)TLSNLELDAAEKDR;MTNNEDS(0.006)LS(0.232)PT(0.702)S(0.049)S(0.011)T(0.001)LSNLELDAAEKDR;MTNNEDS(0.014)LS(0.045)PT(0.805)S(0.045)S(0.045)T(0.045)LSNLELDAAEKDR 160.12 5.75E-17 27887900 75884 83572 75736 78637 86840 76922 88914 65330 76734 87889 TRUE FALSE 81693.73738 79421.93601 78261.00044 72212.10555 83430.22526 79849.32061 77239.485 73868.85531 83408.18462 85021.18913 0.960863265 0.934142851 0.920488189 0.849342456 0.981287443 0.939169652 0.908473356 0.868828772 0.981028206 1 16.37553482 -8.454343899 7.402532279 0.999928655 0.92077107 0.369615351 0.037070034 0.254866961 23.09381352 0.036267182 0.009379522 3.51E-09 8.454343899 -0.079157585 MTNNEDSLSPTS(ph)STLSNLELDAAEKDR ddPTM_A459_MK2206_30min_R1 1 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MT(0.008)NNEDS(0.238)LS(0.191)PT(0.191)S(0.297)S(0.06)T(0.016)LSNLELDAAEKDR 61.109 0.0077739 9614700 1110.4 1012.1 937.09 885.35 883.48 837.68 854.3 893.22 622.26 703.73 TRUE FALSE 1015.954649 946.212106 873.4829417 953.5398104 848.2891208 885.1087177 797.3112058 885.4106717 686.9461538 790.9133853 1.284533386 1.196353638 1.104397723 1.205618502 1.07254364 1.1190969 1.008089154 1.119478679 0.868547892 1 9.6273759 -5.258931235 0.282350528 0.957109916 1.429190074 0.649961883 0.066931558 4.035138869 0.331149061 0.08192348 0.648035799 5.51E-06 5.258931235 0.472080158 MTNS(ph)PVLPVGSTTNGSR ddPTM_A459_MK2206_30min_R2 1 MTNSPVLPVGSTTNGSR 17 0 P37275-3;P37275-4;P37275-5;P37275;P37275-2 P37275-3 ZEB1 Zinc finger E-box-binding homeobox 1 1 MT(0.194)NS(0.806)PVLPVGSTTNGSR 113.81 0.0017788 5906400 19768 24889 21425 21027 19760 18874 20985 23208 16770 25195 TRUE FALSE 21281.45328 23653.04845 22139.29881 19309.02684 18984.12311 19592.2633 18229.64429 26241.36528 18228.62429 24372.88921 0.873160875 0.970465514 0.908357586 0.792233808 0.77890327 0.803854772 0.747947612 1.076662067 0.747905762 1 14.57298966 -10.35268989 9.478136161 0.999996946 0.858144072 0.156458706 0.100488538 0 0 0.097852806 0.023732791 4.44E-11 10.35268989 -0.141852873 MTNSPVLPVGSTTNGS(ph)R ddPTM_A459_MK2206_30min_R2 2 MTNSPVLPVGSTTNGSR 17 0 P37275-3;P37275-4;P37275-5;P37275;P37275-2 P37275-3 ZEB1 Zinc finger E-box-binding homeobox 1 1 MTNSPVLPVGS(0.069)T(0.037)T(0.125)NGS(0.769)R;MTNSPVLPVGS(0.001)TT(0.012)NGS(0.987)R 147.08 0.00036771 5629300 29656 33181 31893 34327 35468 29960 30777 27788 29989 24720 TRUE FALSE 31926.48616 31533.27979 32956.2967 31522.37429 34075.34811 31100.14879 26735.94293 31419.98701 32597.38901 23913.38842 1.335088344 1.318645406 1.378152528 1.318189365 1.424948548 1.300532917 1.118032395 1.313907776 1.363143877 1 14.54553095 -7.006942908 24.33930569 1.222694651 1.353277078 0.349345025 0.098544321 296.7019572 1040132.192 0.034611657 0.029363205 9.84E-08 7.006942908 0.130582427 MTTTSAAAYGTHLS(ph)PHVPHR ddPTM_A459_MK2206_30min_R2 2 MTTTSAAAYGTHLSPHVPHR 20 0 P16144-4;P16144-2;P16144-3;P16144;J3QRK0 P16144-4 ITGB4 Integrin beta-4 1 MTTTSAAAY(0.031)GT(0.035)HLS(0.934)PHVPHR;MTTTSAAAY(0.337)GT(0.205)HLS(0.459)PHVPHR 68.569 0.0068599 14656400 47627 28218 35381 45455 36577 47472 51220 30703 75321 45794 TRUE FALSE 51273.35974 26816.73515 36560.58488 41741.1811 35140.8032 49278.58023 44494.75247 34715.98752 81872.28443 44299.74553 1.157418832 0.605347386 0.82530011 0.942244263 0.793250678 1.112389691 1.004401988 0.783661105 1.848143448 1 15.43501079 -8.237978566 24.99689568 1.4240719 0.898499188 0.419407667 0.245184116 593.5250935 632387.8691 0.154254396 0.05823054 5.78E-09 8.237978566 -0.525572712 MVEPENAVTITPLRPEDDYS(ph)PR ddPTM_A459_MK2206_30min_R1 3 MVEPENAVTITPLRPEDDYSPR 22 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;A0A669KAX5;H0YDF9 A0A0G2JMS7 SCRIB Protein scribble homolog 1 MVEPENAVTITPLRPEDDY(0.013)S(0.987)PR;MVEPENAVT(0.004)IT(0.013)PLRPEDDY(0.31)S(0.673)PR;MVEPENAVT(0.001)IT(0.014)PLRPEDDY(0.022)S(0.963)PR 104.55 3.76E-05 56688000 4714.5 4703.2 3970.9 3299.25 4675.6 4937.4 5225.2 4377.7 4921.1 4639.5 TRUE FALSE 4313.507018 4397.020825 3701.366372 3553.358807 4489.360951 5216.951321 4876.636442 4339.42623 5432.665955 5214.276286 0.827249417 0.843265793 0.709852368 0.681467305 0.86097489 1.000513021 0.935247036 0.832220234 1.041883026 1 12.34825131 -6.52050535 5.800807057 0.948630578 0.766933689 0.639886986 0.069172608 0.113705094 14.48957215 0.023380142 0.024668107 3.02E-07 6.52050535 -0.18169689 MVEPENAVTITPLRPEDDYS(ph)PR ddPTM_A459_MK2206_30min_R2 2 MVEPENAVTITPLRPEDDYSPR 22 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;A0A669KAX5;H0YDF9 A0A0G2JMS7 SCRIB Protein scribble homolog 1 MVEPENAVTIT(0.002)PLRPEDDY(0.31)S(0.688)PR;MVEPENAVTITPLRPEDDY(0.041)S(0.959)PR 94.087 0.00013501 32150000 98428 89257 85153 102378 88396 103144 113846 85751 104533 84457 TRUE FALSE 105963.7234 84824.62717 87991.95852 94013.38991 84925.12889 107069.2172 98897.88345 96958.95013 113625.0914 81701.17501 1.296966945 1.038230199 1.076997467 1.150698137 1.039460312 1.310497887 1.210483 1.186750988 1.390739991 1 16.31806921 -6.760236437 24.99999929 1.230790594 1.115165838 0.150203074 0.116178619 53.48169389 1111483.65 0.037291325 0.035316238 1.74E-07 6.760236437 -0.115624757 MVIQEIENS(ph)EDEEGKSGR ddPTM_A459_MK2206_30min_R1 2 MVIQEIENSEDEEGKSGR 18 1 Q07617;Q07617-2 Q07617 SPAG1 Sperm-associated antigen 1 1 MVIQEIENS(1)EDEEGKSGR;MVIQEIENS(1)EDEEGKSGR 98.76 0.0017566 13743500 2523.49 3183 3047.4 2732.16 2110.5 2045.05 2556.21 2274.21 2370.13 2179.55 TRUE FALSE 2308.853924 2975.786121 2840.550979 2942.591437 2026.434316 2160.838964 2385.689895 2254.326822 2616.513495 2449.569109 0.942555128 1.214820235 1.159612508 1.201269001 0.827261541 0.882130231 0.973922265 0.920295253 1.068152552 1 11.25831228 -6.252695862 24.99721121 0.939581662 1.137800244 0.484515688 0.092846853 532.1920416 1521506.169 0.027487423 0.034930907 5.59E-07 6.252695862 0.198218581 MVIQEIENS(ph)EDEEGKSGR ddPTM_A459_MK2206_30min_R2 1 MVIQEIENSEDEEGKSGR 18 1 Q07617;Q07617-2 Q07617 SPAG1 Sperm-associated antigen 1 1 MVIQEIENS(1)EDEEGKSGR 103.31 0.0011487 6365900 11361 8222 9558.5 11154 8689.1 8202.5 13479 8874.9 9459.4 9567.2 TRUE FALSE 12230.8069 7813.707436 9877.175619 10242.68252 8347.922275 8514.651885 11709.19111 10034.8799 10282.16151 9255.023048 1.32153176 0.844266664 1.067223233 1.106716047 0.901988275 0.920003315 1.265171469 1.084263092 1.11098173 1 13.17602087 -7.245420024 24.95596903 1.122126017 1.018426468 0.085551474 0.138766055 1775.829912 2766504.322 0.051339586 0.039642724 5.68E-08 7.245420024 -0.103699549 MVIQGPS(ph)SPQGEAMVTDVLEDQK ddPTM_A459_MK2206_30min_R1 6 MVIQGPSSPQGEAMVTDVLEDQK 23 0 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.494)S(0.494)PQGEAMVT(0.011)DVLEDQK;MVIQGPS(0.498)S(0.498)PQGEAMVT(0.004)DVLEDQK;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQK;MVIQGPS(0.596)S(0.404)PQGEAMVTDVLEDQK;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQK;MVIQGPS(0.618)S(0.382)PQGEAMVTDVLEDQK 224.44 2.32E-27 30753600 10198.36 10148.37 10931.14 7795.52 7804.8 8362.92 11231.95 8816.72 12063.45 12838.29 TRUE FALSE 9330.935928 9487.709268 10189.16467 8395.932301 7493.918289 8836.421303 10482.68711 8739.636347 13317.4888 14428.79429 0.646688541 0.657553852 0.706168822 0.58188731 0.519372453 0.61241578 0.726511647 0.605708015 0.922980017 1 13.81666313 -8.343525644 3.806087533 0.994885534 0.631745185 0.842380287 0.057285729 0.089701335 2.310091938 0.058730916 0.015765364 4.53E-09 8.343525644 -0.363140349 MVIQGPS(ph)SPQGEAMVTDVLEDQK ddPTM_A459_MK2206_30min_R2 5 MVIQGPSSPQGEAMVTDVLEDQK 23 0 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.493)S(0.493)PQGEAMVT(0.015)DVLEDQK;MVIQGPS(0.499)S(0.499)PQGEAMVT(0.002)DVLEDQK;MVIQGPS(0.598)S(0.402)PQGEAMVTDVLEDQK;MVIQGPS(0.588)S(0.412)PQGEAMVTDVLEDQK;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQK 82.089 0.00046952 6096500 56580.7 60023.6 59553.4 58400.2 53327.5 45603.1 69746.4 50569.4 43391.2 59157.1 TRUE FALSE 60912.5619 57042.91531 61538.88063 53628.71685 51233.5944 47338.55793 60588.6139 57178.99421 47165.28814 57226.80867 1.064406059 0.996786587 1.075350558 0.937125765 0.895272611 0.827209467 1.058745286 0.999164474 0.824181695 1 15.80440353 -5.775091303 23.79062116 0.933562027 1.040641604 0.32801087 0.072687664 155.9961559 271847.8098 0.021000764 0.031366031 1.68E-06 5.775091303 0.107079576 MVIQGPS(ph)SPQGEAMVTDVLEDQKEGR ddPTM_A459_MK2206_30min_R1 7 MVIQGPSSPQGEAMVTDVLEDQKEGR 26 1 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.652)S(0.348)PQGEAMVTDVLEDQKEGR 156.32 4.45E-14 73579100 14998.98 14814.69 15591.5 14976.98 14754.3 12743.17 12552.85 15453.2 11783.36 8978.73 TRUE FALSE 13723.23799 13850.25099 14533.19242 16130.50959 14166.60499 13464.67727 11715.47228 15318.0943 13008.28244 10091.08286 1.359937103 1.37252376 1.440201475 1.598491443 1.403873617 1.33431441 1.160972756 1.517983205 1.289086872 1 13.30079338 -6.799133957 3.448666215 1.281845309 1.443107482 0.289892737 0.136853627 0.364795721 8.974055945 0.049705835 0.045268997 1.59E-07 6.799133957 0.161262172 MVIQGPS(ph)SPQGEAMVTDVLEDQKEGR ddPTM_A459_MK2206_30min_R2 11 MVIQGPSSPQGEAMVTDVLEDQKEGR 26 1 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.585)S(0.415)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.57)S(0.43)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.498)S(0.498)PQGEAMVT(0.004)DVLEDQKEGR;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.597)S(0.402)PQGEAMVT(0.001)DVLEDQKEGR;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.499)S(0.499)PQGEAMVT(0.002)DVLEDQKEGR 95.209 2.51E-05 45975100 140948.1 244440.3 201599.5 230239.2 246546.7 210640.9 232719.4 168415 222371.9 193282.6 TRUE FALSE 151739.1949 232301.7502 208320.7267 211427.9209 236866.0378 218656.9871 202163.0632 190427.4188 241713.4059 186975.8046 0.811544548 1.242416101 1.114158739 1.130776901 1.266827215 1.169440011 1.081225796 1.018460218 1.292752324 1 17.51249207 -4.751388118 24.99623242 1.147783149 0.811543863 0.530988648 0.094353579 322.462536 801869.5103 0.022710073 0.300612862 1.77E-05 4.751388118 -0.336239286 MVIQGPSS(ph)PQGEAMVTDVLEDQK ddPTM_A459_MK2206_30min_R1 1 MVIQGPSSPQGEAMVTDVLEDQK 23 0 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.009)S(0.991)PQGEAMVTDVLEDQK 158.53 2.86E-09 4560200 1409.4 1695 1684 1092.9 1073.7 1276 1413.7 1079.3 1667.8 1980.9 TRUE FALSE 1289.523129 1584.655192 1569.694772 1177.075347 1030.932255 1348.246017 1319.394652 1069.863794 1841.173778 2226.308847 0.579220233 0.711785876 0.705066044 0.528711616 0.463067942 0.605597026 0.592637744 0.480554976 0.827007349 1 11.12043803 -8.483914817 4.203369979 0.998639565 0.587942605 0.755557016 0.078066229 0.093903689 3.871792361 0.082063494 0.021477979 3.28E-09 8.483914817 -0.410696961 MVIQGPSS(ph)PQGEAMVTDVLEDQKEGR ddPTM_A459_MK2206_30min_R1 8 MVIQGPSSPQGEAMVTDVLEDQKEGR 26 1 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.412)S(0.588)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.098)S(0.902)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.261)S(0.739)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.265)S(0.735)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.23)S(0.75)PQGEAMVT(0.02)DVLEDQKEGR;MVIQGPS(0.21)S(0.79)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.222)S(0.778)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.236)S(0.764)PQGEAMVTDVLEDQKEGR 205.23 5.84E-33 169007200 21476.7 21033.7 21322.5 19752.6 20713 16823.42 17782.6 20193.1 15860.29 11392.3 TRUE FALSE 19649.99389 19664.40231 19875.18811 21273.94867 19887.95735 17775.9475 16596.3552 20016.55386 17509.0239 12803.66413 1.534716444 1.53584178 1.552304708 1.661551604 1.553302019 1.38834847 1.296219194 1.563345746 1.367501031 1 13.64426912 -12.66941003 0.179055863 1.26E-09 1.628478529 0.769405534 0.087209385 31.44010536 0.550701131 12.07444149 0.322099032 2.14E-13 12.66941003 1.628478527 MVIQGPSS(ph)PQGEAMVTDVLEDQKEGR ddPTM_A459_MK2206_30min_R2 2 MVIQGPSSPQGEAMVTDVLEDQKEGR 26 1 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.245)S(0.755)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.067)S(0.933)PQGEAMVTDVLEDQKEGR 152.63 1.59E-11 13741100 47847 76952 65363 74228 73894 69228 78281 55159 73150 63470 TRUE FALSE 51510.20311 73130.67558 67542.1698 68163.33496 70992.55027 71862.52005 68002.61067 62368.47069 79512.45478 61398.9791 0.838942339 1.191073152 1.100053629 1.110170494 1.156249686 1.17041881 1.107552791 1.015790028 1.295012652 1 15.90592705 -4.753749267 24.99882568 1.128099977 0.83894182 0.535414753 0.080599105 206.0015717 669610.2794 0.018560039 0.19384741 1.76E-05 4.753749267 -0.289158156 MVNHFIAEFK ddPTM_A459_MK2206_30min_R1 1 MVNHFIAEFK 10 0 P11142;E9PKE3;P11142-2;E9PN89;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 104.43 0.018486 14777000 11984 11988 12137 11310 11667 10184 11547 10681 9538.7 9928.9 FALSE TRUE 10964.69787 11207.57902 11313.17426 12181.09816 11202.27868 10760.60928 10776.7207 10587.61714 10530.282 11158.96709 0.982590752 1.004356311 1.013819125 1.091597283 1.003881326 0.964301551 0.965745361 0.948799029 0.943660996 1 13.44591587 -6.680759999 4.119294369 0.961120636 1.023771574 0.463910064 0.029742628 0.197658019 6.371390335 0.010701709 0.010505194 2.09E-07 6.680759999 0.062650939 MVPPVVVGS(ph)PPGSPSR ddPTM_A459_MK2206_30min_R1 1 MVPPVVVGSPPGSPSR 16 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 MVPPVVVGS(0.79)PPGS(0.128)PS(0.082)R 94.45 0.017266 0 985.05 1275.9 1102.7 1067.9 1113.6 1152 1091.4 1244.4 1031.9 1072.6 TRUE FALSE 901.2663248 1192.838678 1027.851796 1150.149843 1069.242954 1217.225244 1018.594697 1233.520342 1139.169698 1205.481786 0.747639936 0.989511988 0.852648135 0.954099727 0.886983915 1.009741714 0.844968965 1.023259212 0.944991215 1 10.23539414 -4.752355232 24.96194851 0.940322384 0.747639556 0.48191423 0.061248887 295.2993023 811380.5255 0.014113656 0.169671937 1.77E-05 4.752355232 -0.192682828 MVPPVVVGSPPGS(ph)PSR ddPTM_A459_MK2206_30min_R1 1 MVPPVVVGSPPGSPSR 16 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 MVPPVVVGS(0.206)PPGS(0.78)PS(0.013)R 126.71 0.0008988 0 1650.5 1642.9 1340.4 1583.7 1712.6 1411.7 1702.5 1495.6 1603.1 1355.8 TRUE FALSE 1510.116308 1535.946911 1249.417383 1705.676848 1644.383516 1491.629234 1588.929331 1482.524127 1769.747982 1523.76674 0.991041653 1.007993462 0.819953179 1.119381861 1.079156982 0.97890917 1.042764151 0.972933775 1.161429723 1 10.57342635 -5.782462831 24.99999616 1.047395442 0.946495696 0.324209801 0.073127786 292.2356073 347510.4208 0.020326704 0.030184315 1.65E-06 5.782462831 -0.100899747 MVS(ph)LFYGIIT(ph)SMLNS(ph)LIY(ph)SLRNK ddPTM_A459_MK2206_30min_R1 1 MVSLFYGIITSMLNSLIYSLRNK 23 1 O76000 O76000 OR2B3 Putative olfactory receptor 2B3 4 MVS(0.865)LFY(0.123)GIIT(0.51)S(0.511)MLNS(0.758)LIY(0.815)S(0.418)LRNK 57.484 0.043913 0 565.5 701 797.94 552.71 636.81 562.84 606.92 473.08 774.04 983.37 TRUE FALSE 517.4012554 655.3647726 743.778056 595.27982 611.4445092 594.7075144 566.4334742 468.9439114 854.5042279 1105.1973 0.468152841 0.592984414 0.672982151 0.538618598 0.553244664 0.538100767 0.512517968 0.424307869 0.773168943 1 10.11008823 -8.519347864 4.360843859 0.999339545 0.544850268 0.84277904 0.063997425 0.063837021 3.856660384 0.065133828 0.017015032 3.02E-09 8.519347864 -0.454489276 MVSDINNGWQHLEQAEK ddPTM_A459_MK2206_30min_R1 2 MVSDINNGWQHLEQAEK 17 0 O43707;O43707-2 O43707 ACTN4 Alpha-actinin-4 0 ; 148.97 0.00045085 32539000 4885.3 5624.1 5441.6 4532.7 4783 4487.6 4933 4837.4 4476.6 4234.9 FALSE TRUE 4469.779581 5257.970068 5072.239353 4881.809339 4592.482982 4741.684034 4603.928571 4795.107122 4941.95859 4759.551384 0.939117833 1.104719677 1.065696942 1.025686865 0.964898288 0.996246001 0.96730305 1.007470397 1.038324454 1 12.21660988 -6.010730521 21.8407429 0.99474231 1.043725594 0.15296792 0.043451919 152.1380891 309666.9135 0.012348332 0.017038555 9.76E-07 6.010730521 0.048983283 MVSQSQPGS(ph)R ddPTM_A459_MK2206_30min_R1 3 MVSQSQPGSR 10 0 E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 MVSQSQPGS(1)R;MVSQSQPGS(1)R;MVS(0.028)QS(0.071)QPGS(0.901)R 109.72 0.0098965 27422600 4515.9 4010 4867.3 3958.8 5024.3 4463.7 4914.1 4608.2 3190.61 3470.71 TRUE FALSE 4131.798991 3748.948271 4536.921237 4263.707462 4824.171492 4716.430837 4586.289355 4567.910993 3522.285327 3900.687757 1.059248842 0.9610993 1.163108026 1.093065564 1.236748951 1.209128013 1.175764286 1.171052716 0.902990843 1 11.9295128 -3.918638454 15.21671369 1.109071848 1.096814347 0 0.107945613 0 0 0.025294754 0 0.000120604 3.918638454 -0.012257501 MVSQSQPGS(ph)R ddPTM_A459_MK2206_30min_R2 4 MVSQSQPGSR 10 0 E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 MVSQSQPGS(1)R;MVSQSQPGS(1)R;MVSQSQPGS(1)R;MVSQSQPGS(1)R 142.39 0.0012043 64649100 109926 111929 96040 124460 119915 121254 141278 156707 145752 139679 TRUE FALSE 118342.0191 106370.7686 99241.92567 114291.2199 115206.5346 125868.4059 122728.0289 177189.143 158429.2455 135121.2857 0.875820701 0.787224367 0.734465522 0.845841714 0.852615737 0.931521672 0.9082805 1.311334051 1.172496581 1 17.04389543 -7.629570189 5.358473296 1.179256996 0.838660134 0.737299532 0.086190924 0.10044253 4.358232866 0.04279065 0.024114933 2.35E-08 7.629570189 -0.340596862 MVVESAYEVIK ddPTM_A459_MK2206_30min_R1 2 MVVESAYEVIK 11 0 A0A5F9ZHM4;P07195;A0A3B3IS95 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 0 ; 229.88 4.74E-06 20561400 4830.7 6051 4618.4 4955.1 5233.1 4661.4 4947.9 4476.4 3218.2 4365.5 FALSE TRUE 4419.823598 5657.0788 4304.915876 5336.742661 5024.654546 4925.32444 4617.834619 4437.263307 3552.743406 4906.331098 0.900840875 1.153016111 0.87742058 1.087725747 1.024116482 1.00387119 0.941199142 0.904395406 0.724114075 1 12.26042888 -7.60270996 2.111806872 0.855288626 1.012876712 0.266154868 0.097891802 0.376030976 3.337328882 0.056397777 0.027275505 2.50E-08 7.60270996 0.157588086 MVVS(ph)IAEDLLR ddPTM_A459_MK2206_30min_R2 1 MVVSIAEDLLR 11 0 Q9P2D3;Q9P2D3-2;Q9P2D3-3 Q9P2D3 HEATR5B HEAT repeat-containing protein 5B 1 MVVS(1)IAEDLLR 75.652 0.043949 1345200 0 2493.4 882.34 2218.3 1159.3 2006.5 2452.4 1898.9 1259 2243.1 TRUE FALSE 0 2369.581382 911.7567752 2037.057794 1113.780057 2082.858764 2130.396934 2147.09275 1368.505544 2169.907831 0 1.09201937 0.42018226 0.938776184 0.5132845 0.959883519 0.98179144 0.989485691 0.630674504 1 11.08341805 -4.749714944 24.94823645 0.824427991 1.83E-06 0.564977755 0.219915264 380.7909002 810226.8972 0.052296549 0.829396945 1.78E-05 4.749714944 -0.824426162 MVVS(ph)MPNLQDIAMPELAPR ddPTM_A459_MK2206_30min_R1 2 MVVSMPNLQDIAMPELAPR 19 0 H0YAY3;E9PF32;A2RUS2-2;A2RUS2 H0YAY3 DENND3 DENN domain-containing protein 3 1 MVVS(1)MPNLQDIAMPELAPR;MVVS(1)MPNLQDIAMPELAPR 219.72 3.26E-19 20854600 4565.7 5272 4580.3 4460 5412.8 4879.7 5086.5 4998.6 3970.6 3960.8 TRUE FALSE 4177.36324 4928.791842 4269.401997 4803.509973 5197.196714 5155.984397 4747.188866 4954.897767 4383.358079 4451.493807 0.938418298 1.107221992 0.959094224 1.079078211 1.167517454 1.158259367 1.06642603 1.113086524 0.984693739 1 12.12007383 -4.753572143 24.93123217 1.076549827 0.938418038 0.253232518 0.067401332 400.3441884 1268583.383 0.017248137 0.183156112 1.76E-05 4.753572143 -0.138131789 MVVS(ph)MPNLQDIAMPELAPR ddPTM_A459_MK2206_30min_R2 1 MVVSMPNLQDIAMPELAPR 19 0 H0YAY3;E9PF32;A2RUS2-2;A2RUS2 H0YAY3 DENND3 DENN domain-containing protein 3 1 MVVS(1)MPNLQDIAMPELAPR 94.837 0.0017808 17799000 33267 47917 42787 41532 39269 26596 49137 20102 28195 31620 TRUE FALSE 35813.9471 45537.51146 44213.49722 38138.70275 37727.10175 27608.12942 42685.25288 22729.40042 30647.35014 30588.24199 1.170840322 1.48872601 1.445440939 1.246841932 1.233385749 0.902573264 1.395479115 0.74307639 1.001932381 1 14.90068957 -6.617829057 0.897005271 0.969986407 1.386192138 0.434012751 0.17621531 0.526748605 0.928572953 0.100373483 0.108634238 2.41E-07 6.617829057 0.416205732 MVYS(ph)INLT(ph)S(ph)RR ddPTM_A459_MK2206_30min_R1 1 MVYSINLTSRR 11 1 Q8TDR0-2;Q8TDR0 Q8TDR0-2 TRAF3IP1 TRAF3-interacting protein 1 3 MVY(0.056)S(0.944)INLT(1)S(1)RR 69.825 0.032114 0 971.18 432.06 672.7 802.08 1419.9 2314.3 1090.5 893.09 1346.8 333.79 TRUE FALSE 888.5760411 403.9328155 627.0389982 863.8563406 1363.342376 2445.333666 1017.754735 885.2818083 1486.80468 375.1424252 2.3686365 1.076745226 1.671469171 2.302742326 3.634199399 6.518414079 2.712982234 2.359855215 3.963307213 1 8.551294618 -6.094019189 3.44583533 3.550671703 1.672254229 0.229566911 1.359178008 0.338958355 7.568156629 0.422977156 0.577677374 8.05E-07 6.094019189 -1.878417474 MWPGTVAHSCNPS(ph)TLGGR ddPTM_A459_MK2206_30min_R2 1 MWPGTVAHSCNPSTLGGR 18 0 O14920-3 O14920-3 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta 1 MWPGT(0.016)VAHS(0.094)CNPS(0.769)T(0.12)LGGR 58.671 0.036845 187710 0 0 0 0 0 0 0 439.43 0 0 TRUE FALSE 0 0 0 0 0 0 0 496.8650098 0 0 0 MWVPES(ph)PVCR ddPTM_A459_MK2206_30min_R2 1 MWVPESPVCR 10 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 MWVPES(1)PVCR 82.489 0.042497 2091800 9362 13151 10495 9570.3 12608 11415 11969 7959 10658 10481 TRUE FALSE 10078.76192 12497.94046 10844.89806 8788.375876 12112.94657 11849.40582 10397.45592 8999.268627 11585.01357 10139.00583 0.994058203 1.232659363 1.069621445 0.866788719 1.1946878 1.16869504 1.025490674 0.88758886 1.142618297 1 13.30762858 -7.506380609 24.43970256 1.000370111 1.089061455 0.090774307 0.113965691 1239.793272 1836591.574 0.049396104 0.032288914 3.12E-08 7.506380609 0.088691343 MY(ph)PS(ph)MPAFS(ph)PGPGIK ddPTM_A459_MK2206_30min_R2 1 MYPSMPAFSPGPGIK 15 0 F6V242;P36956-6;P36956-5;P36956-3;P36956-2;P36956;P36956-4 F6V242 SREBF1 Sterol regulatory element-binding protein 1;Processed sterol regulatory element-binding protein 1 3 MY(1)PS(1)MPAFS(1)PGPGIK 87.258 0.017371 0 7872.3 9434.1 11011 8763.1 8902 8884.4 12956 7674 9291.1 7956.9 TRUE FALSE 8475.009341 8965.616312 11378.10124 8047.126698 8552.462751 9222.502068 11254.86164 8677.018149 10099.22308 7697.267005 1.101041361 1.164779175 1.47820015 1.045452456 1.111103817 1.198152807 1.462189324 1.127285586 1.312053106 1 12.91013058 -5.004430574 24.79760071 1.226349161 1.116975699 0.049876411 0.153132703 529.2120292 2962124.589 0.037423123 0.131562007 9.90E-06 5.004430574 -0.109373461 MYASVLLITAMS(ph)LDR ddPTM_A459_MK2206_30min_R1 1 MYASVLLITAMSLDR 15 0 G3V4Q5 G3V4Q5 LTB4R 1 MYASVLLIT(0.019)AMS(0.981)LDR 106.4 0.01705 59402000 1109.3 833.68 855.93 730.28 1023.5 913.96 950.15 797.06 690.42 872.81 TRUE FALSE 1014.94821 779.4072805 797.8318564 786.5262921 982.7318277 965.7076254 886.7672271 790.0913885 762.1916297 980.9402922 1.034668693 0.794551194 0.81333376 0.801808528 1.001826345 0.984471362 0.903997149 0.805442895 0.777001043 1 9.938021515 -4.742578812 24.7857002 0.873693034 1.034669279 0.232935406 0.086396331 1888.580512 2481741.827 0.02299883 0.792365755 1.81E-05 4.742578812 0.160976245 MYFPDVEFDIKS(ph)PK ddPTM_A459_MK2206_30min_R1 2 MYFPDVEFDIKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MYFPDVEFDIKS(1)PK;MYFPDVEFDIKS(1)PK 85.576 0.013432 116966000 13451.2 15648.5 12077 10068.5 4596.5 3950.3 4470.9 5149.1 5652.1 4859.7 TRUE FALSE 12307.1048 14629.77981 11257.24689 10843.97761 4413.411672 4173.962572 4172.654419 5104.081962 6239.656021 5461.756325 2.25332367 2.678585227 2.061103832 1.985437828 0.808057227 0.764216183 0.763976672 0.93451294 1.142426657 1 12.41514923 -6.113322808 2.489708919 0.876344219 2.367352741 0.925847187 0.18727266 0.072090893 0.874576388 0.061557834 0.086398273 7.70E-07 6.113322808 1.491008522 up MYFPDVEFDIKS(ph)PK ddPTM_A459_MK2206_30min_R2 1 MYFPDVEFDIKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MYFPDVEFDIKS(1)PK 61.165 0.047712 17526000 61790 44742 47745 26725 29591 16825 37026 23455 25237 32282 TRUE FALSE 66520.68991 42520.17734 49336.79447 24541.48201 28429.10866 17465.28716 32164.44172 26520.64903 27432.06864 31228.64098 2.130117988 1.361576297 1.579857237 0.785864554 0.910353693 0.559271445 1.029966105 0.849241216 0.878426591 1 14.93058217 -4.872290607 0.865031641 0.837917559 2.61206337 0.786740854 0.201982685 0.896261737 0.571270332 0.07206739 1.477815541 1.34E-05 4.872290607 1.774145811 up MYGISLCQAILDETKGDYEK ddPTM_A459_MK2206_30min_R1 2 MYGISLCQAILDETKGDYEK 20 1 P04083 P04083 ANXA1 Annexin A1 0 ; 226.08 2.89E-23 22499000 3944.3 4204.3 4560 4713.1 3887.1 3712.6 4245.1 3996.5 2911.1 2703.3 FALSE TRUE 3608.816573 3930.599306 4250.479905 5076.103779 3732.268576 3922.804204 3961.917125 3961.559022 3213.719262 3038.205213 1.187811988 1.2937241 1.399010142 1.670757379 1.228445189 1.291158407 1.3040321 1.303914234 1.057768991 1 11.5690036 -8.277525805 2.291141364 0.993923258 1.347032287 0.495268707 0.124451234 0.263992349 2.548899395 0.123464383 0.035477588 5.28E-09 8.277525805 0.353109029 MYLQQDELEEEEDERGPT(ph)PPVR ddPTM_A459_MK2206_30min_R2 1 MYLQQDELEEEEDERGPTPPVR 22 1 A0A0A0MSX4;Q9Y6N7-4;Q9Y6N7-3;Q9Y6N7;Q9Y6N7-2;A0A087WZ85;A0A087WTM1;Q9Y6N7-5;H7C545;Q9Y6N7-6 A0A0A0MSX4 ROBO1 Roundabout homolog 1 1 MYLQQDELEEEEDERGPT(1)PPVR 60.602 0.02043 2474900 4804.3 7072.3 5846.2 5697.1 2978.8 5834.8 6221.7 4304.3 6086.4 4557.6 TRUE FALSE 5172.120902 6721.099866 6041.10939 5231.628706 2861.837345 6056.847403 5404.783316 4866.886789 6615.78407 4408.885885 1.173112899 1.524444053 1.370212237 1.186610142 0.649106695 1.373781849 1.225884148 1.103881324 1.500556885 1 12.10619842 -5.79705346 5.485794923 1.142973475 1.37377292 0.148509711 0.227514264 0.328836389 25.04083926 0.064796335 0.100732414 1.60E-06 5.79705346 0.230799446 MYPESTTGS(ph)PAR ddPTM_A459_MK2206_30min_R1 2 MYPESTTGSPAR 12 0 A0A590UJ15;A0A590UJK5;A0A5F9UN28;A0A590UJJ4;K7EKU4;K7EIR5;A0A590UJU4;Q5TG84;A0A590UJU1;A0A590UJY1;A0A590UK89;Q5TG78;A0A590UJX9;A0A590UJV4;A0A590UJ72;A0A590UJI8;Q13303-2;Q13303;Q13303-5 A0A590UJ15 KCNAB2 Voltage-gated potassium channel subunit beta-2 1 MYPES(0.002)T(0.009)T(0.009)GS(0.98)PAR;MYPES(0.007)T(0.039)T(0.039)GS(0.915)PAR 145.83 0.00067258 6230100 2054.1 1938.9 2164.7 1732.2 2436 2166.5 2145.8 2012.76 1722.82 1437.02 TRUE FALSE 1879.388008 1812.677258 2017.766195 1865.614344 2338.968962 2289.165358 2002.657597 1995.162652 1901.913304 1615.048887 1.16367252 1.122366804 1.249353015 1.155144194 1.448234156 1.417396945 1.239998129 1.235357436 1.17761965 1 10.65736212 -8.692076063 1.647216616 1.000567057 1.259310747 0.373295787 0.100027536 0.777268459 4.129935211 0.106733528 0.030574741 2.03E-09 8.692076063 0.25874369 MYPESTTGS(ph)PAR ddPTM_A459_MK2206_30min_R2 2 MYPESTTGSPAR 12 0 A0A590UJ15;A0A590UJK5;A0A5F9UN28;A0A590UJJ4;K7EKU4;K7EIR5;A0A590UJU4;Q5TG84;A0A590UJU1;A0A590UJY1;A0A590UK89;Q5TG78;A0A590UJX9;A0A590UJV4;A0A590UJ72;A0A590UJI8;Q13303-2;Q13303;Q13303-5 A0A590UJ15 KCNAB2 Voltage-gated potassium channel subunit beta-2 1 MYPESTT(0.004)GS(0.995)PAR;MYPEST(0.001)T(0.007)GS(0.993)PAR 135.6 0.0014768 13019100 34917 48526 39480 38180 37760 45781 43808 41306 37536 40298 TRUE FALSE 37590.27237 46116.2694 40796.2435 35060.57187 36277.35267 47523.22804 38055.95698 46704.83602 40800.81343 38983.07956 0.964271494 1.182981692 1.046511562 0.899379225 0.930592274 1.219073213 0.976217308 1.198079694 1.046628791 1 15.25056044 -6.740014744 24.99999305 1.093393481 1.011115664 0.141107878 0.101660422 517.5895827 603964.033 0.034033757 0.034001085 1.82E-07 6.740014744 -0.082277817 MYS(ph)FDDVLEEGK ddPTM_A459_MK2206_30min_R1 4 MYSFDDVLEEGK 12 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK 185.2 0.00010439 6662600 6078.6 6821.73 6865.25 4537.08 4705.14 4468.78 5273.95 4098.12 5898.29 6907.88 TRUE FALSE 5561.58315 6377.634137 6399.255958 4886.526688 4517.724311 4721.798462 4922.134418 4062.290569 6511.438353 7763.680326 0.716359113 0.821470471 0.824255468 0.629408539 0.581904988 0.608190737 0.633994988 0.523242895 0.838705109 1 12.922525 -8.5202342 6.911226131 0.999960844 0.670834795 0.573872988 0.092203919 0.087411841 33.33358267 0.100668294 0.02604899 3.02E-09 8.5202342 -0.329126049 MYS(ph)FDDVLEEGK ddPTM_A459_MK2206_30min_R2 2 MYSFDDVLEEGK 12 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK 147.73 0.00062175 2352600 13794.9 10647.2 11779.2 11866.9 9354.6 6917.6 11405.3 8904.6 6970.9 10034.5 TRUE FALSE 14851.04815 10118.47553 12171.91265 10897.33631 8987.291401 7180.854115 9907.77041 10068.46179 7577.216281 9707.075087 1.529919983 1.042381504 1.253921757 1.122617906 0.925849581 0.739754669 1.020675159 1.037229207 0.780586965 1 13.24482094 -1.522878745 0.471063141 0.913650175 15.39269868 0.629589959 0.131210727 65.62326574 0.752192967 0.079722256 925.6712566 0.03 1.522878745 14.47904851 NAASFPLRS(ph)PQPVCSPAGSEGTPK ddPTM_A459_MK2206_30min_R1 2 NAASFPLRSPQPVCSPAGSEGTPK 24 1 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 NAAS(0.05)FPLRS(0.95)PQPVCSPAGSEGTPK;NAAS(0.002)FPLRS(0.914)PQPVCS(0.081)PAGS(0.003)EGTPK 107.07 2.98E-07 29117000 3976.5 4392.6 4139.5 4189.9 3584 3255.5 3394.3 4071 4120.1 3659.5 TRUE FALSE 3638.277794 4106.640942 3858.522273 4512.606824 3441.241691 3439.823597 3167.87244 4035.407676 4548.399139 4112.866488 0.884608777 0.998486324 0.938158893 1.097192636 0.836701532 0.836356737 0.770234689 0.981166709 1.105895159 1 12.00592852 -7.999935363 24.99982547 1.049808728 0.912268438 0.295347843 0.089632016 2.900356777 1121828.65 0.053622086 0.025349233 1.00E-08 7.999935363 -0.13754029 NAASFPLRS(ph)PQPVCSPAGSEGTPK ddPTM_A459_MK2206_30min_R2 2 NAASFPLRSPQPVCSPAGSEGTPK 24 1 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 NAAS(0.006)FPLRS(0.994)PQPVCSPAGSEGTPK;NAAS(0.001)FPLRS(0.999)PQPVCSPAGSEGTPK 126.5 7.63E-08 16667800 35733 41111 31885 42991 43613 34333 47144 32924 34559 40293 TRUE FALSE 38468.74595 39069.48752 32948.02999 39478.49778 41900.53448 35639.56637 40953.93617 37227.27984 37564.87935 38978.24271 0.986928688 1.002340916 0.845292853 1.012834213 1.074972384 0.914345129 1.050687084 0.955078455 0.963739685 1 15.25038143 NADSELMPPPPERGDPPRLS(ph)PDPVAGSAVSQELR ddPTM_A459_MK2206_30min_R1 2 NADSELMPPPPERGDPPRLSPDPVAGSAVSQELR 34 2 E9PMR3;E9PMG4;Q9BUR4 E9PMR3 WRAP53 Telomerase Cajal body protein 1 1 NADSELMPPPPERGDPPRLS(0.998)PDPVAGS(0.001)AVS(0.001)QELR;NADSELMPPPPERGDPPRLS(0.972)PDPVAGS(0.013)AVS(0.015)QELR 98.446 1.57E-11 21663000 3510.98 3671.9 3299.1 3980.6 4239.9 3399 2585.72 4153.3 2482.96 1355.37 TRUE FALSE 3212.352714 3432.858643 3075.166284 4287.186502 4071.015805 3591.448443 2413.231337 4116.988136 2741.072577 1523.283468 2.108834489 2.253591478 2.018774803 2.814437753 2.672526742 2.357701976 1.584229979 2.702706504 1.799450092 1 10.57296872 -8.557851091 5.60889024 1.000168022 2.306297392 0.580101018 0.346222715 0.166436592 21.54172693 0.341204492 0.088533821 2.77E-09 8.557851091 1.30612937 NAEAVLQS(ph)PGLSGK ddPTM_A459_MK2206_30min_R1 4 NAEAVLQSPGLSGK 14 0 Q13045-2;Q13045-3;Q13045 Q13045-2 FLII Protein flightless-1 homolog 1 NAEAVLQS(1)PGLSGK;NAEAVLQS(0.999)PGLS(0.001)GK;NAEAVLQS(0.99)PGLS(0.01)GK;NAEAVLQS(1)PGLSGK 214.54 1.11E-06 249587000 31611.9 34044.9 33872.6 29585.6 27511.7 25539.4 29485.7 29331.7 29276.1 26608.3 TRUE FALSE 28923.1419 31828.57082 31573.42229 31864.28804 26415.85073 26985.41876 27518.76275 29075.25604 32319.45536 29904.73709 0.96717593 1.064332073 1.055800029 1.06552644 0.883333321 0.902379402 0.920214168 0.972262553 1.080747016 1 14.86808641 -4.400792684 13.3088705 0.990141264 0.000171944 0.010622195 0.069371753 577303.4464 740099.5695 0.019250413 16906878.78 3.97E-05 4.400792684 -0.98996932 NAEAVLQS(ph)PGLSGK ddPTM_A459_MK2206_30min_R2 4 NAEAVLQSPGLSGK 14 0 Q13045-2;Q13045-3;Q13045 Q13045-2 FLII Protein flightless-1 homolog 1 NAEAVLQS(1)PGLSGK;NAEAVLQS(0.984)PGLS(0.016)GK;NAEAVLQS(0.988)PGLS(0.012)GK;NAEAVLQS(1)PGLSGK 173.34 0.00010603 259389000 542060 592130 561669 577212 577970 458022 693860 479568 458794 584732 TRUE FALSE 583560.5304 562725.6852 580394.7641 530051.9332 555275.9937 475452.3482 602755.3485 542249.1842 498699.0728 565652.2427 1.031659536 0.994826225 1.026062871 0.937063258 0.981656134 0.840538253 1.065593492 0.95862642 0.881635456 1 19.10955585 -5.759324532 24.99877052 0.95173972 1.015247222 0.205892064 0.058765032 90.75813455 1072780.89 0.015893738 0.025899974 1.74E-06 5.759324532 0.063507502 NAEEES(ph)ESEAEEGD ddPTM_A459_MK2206_30min_R1 3 NAEEESESEAEEGD 14 0 H0Y503;Q7L1Q6-2;Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3 H0Y503 BZW1 Basic leucine zipper and W2 domain-containing protein 1 1 NAEEES(0.997)ES(0.003)EAEEGD;NAEEES(0.988)ES(0.012)EAEEGD;NAEEES(0.53)ES(0.47)EAEEGD 164.92 0.00025695 22045000 4059.32 4610.87 5105.21 5202.26 4452.59 4472.6 5269.09 4781.02 5201.63 3936.5 TRUE FALSE 3714.053518 4310.701525 4758.682569 5602.938967 4275.233912 4725.834747 4917.59862 4739.220046 5742.358053 4424.183339 0.839489061 0.974349658 1.075607 1.266434625 0.966332899 1.068182393 1.111526861 1.071207878 1.297947579 1 12.11119546 -4.995212091 2.19881251 1.109792622 0.8258478 0.431773403 0.098329297 0.391656405 3.028442044 0.026103061 0.184399947 1.01E-05 4.995212091 -0.283944822 NAEEES(ph)ESEAEEGD ddPTM_A459_MK2206_30min_R2 2 NAEEESESEAEEGD 14 0 H0Y503;Q7L1Q6-2;Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3 H0Y503 BZW1 Basic leucine zipper and W2 domain-containing protein 1 1 NAEEES(0.938)ES(0.062)EAEEGD;NAEEES(0.995)ES(0.005)EAEEGD 237.59 2.23E-19 11663500 34516 45276 42010 46612 43678 42037 49944 40228 45807 45664 TRUE FALSE 37158.5715 43027.65968 43410.59243 42803.6505 41962.98226 43636.74749 43386.29281 45485.93772 49791.21006 44173.98742 0.841186718 0.974049711 0.98271845 0.968978645 0.949947802 0.987838093 0.982168361 1.029699612 1.127161322 1 15.43090944 -7.671740198 1.714232526 1.066129011 0.952773057 0.470675654 0.048662916 0.33149707 1.8874214 0.034195955 0.014683457 2.13E-08 7.671740198 -0.113355954 NAEQYKDQADK ddPTM_A459_MK2206_30min_R2 1 NAEQYKDQADK 11 1 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 111.5 0.023145 7173000 19862 24067 26898 26930 27778 24865 31536 20510 25788 26718 FALSE TRUE 21382.64999 22871.86778 27794.7659 24729.73286 26687.29615 25811.255 27395.28532 23190.72742 28030.99363 25846.19385 0.82730363 0.884922086 1.075391064 0.956803659 1.032542598 0.998648201 1.059934994 0.897258898 1.084530813 1 14.65766422 -5.088809295 4.851919806 1.008937496 0.839047281 0.583741301 0.05383855 0.129204543 5.014649947 0.012727906 0.03763346 8.15E-06 5.088809295 -0.169890215 NALFPEVFS(ph)PTPDENSDQNSR ddPTM_A459_MK2206_30min_R1 4 NALFPEVFSPTPDENSDQNSR 21 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 NALFPEVFS(0.999)PT(0.001)PDENSDQNSR;NALFPEVFS(1)PTPDENSDQNSR;NALFPEVFS(0.994)PT(0.006)PDENSDQNSR;NALFPEVFS(0.997)PT(0.003)PDENSDQNSR 188.01 9.25E-17 44422000 10136.8 13036 13492.1 11706.8 11714 10375.5 11869.2 11888.3 10936.6 11442.2 TRUE FALSE 9274.61193 12187.35403 12576.29384 12608.45976 11247.40658 10962.95184 11077.42732 11784.36185 12073.49871 12859.74612 0.721212677 0.947713424 0.977958175 0.980459462 0.874621199 0.852501421 0.861403267 0.916375933 0.938859803 1 13.65057454 -8.54299093 1.914972075 0.999083758 0.895706235 0.185604977 0.071318469 0.698589882 5.82598274 0.070601932 0.019867504 2.86E-09 8.54299093 -0.103377523 NALFPEVFS(ph)PTPDENSDQNSR ddPTM_A459_MK2206_30min_R2 4 NALFPEVFSPTPDENSDQNSR 21 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 NALFPEVFS(0.714)PT(0.286)PDENSDQNSR;NALFPEVFS(0.988)PT(0.012)PDENSDQNSR;NALFPEVFS(0.989)PT(0.011)PDENSDQNSR;NALFPEVFS(0.77)PT(0.218)PDENS(0.009)DQNS(0.003)R 108.13 0.00037898 3232700 24860.6 31395.7 37115.6 34902.4 34680.3 31855.8 36338.4 24900.9 27384.9 39400.2 TRUE FALSE 26763.94665 29836.63519 38353.01558 32050.76227 33318.57717 33068.09479 31567.12443 28155.53313 29766.7891 38114.5747 0.702197174 0.782814328 1.006255898 0.840905678 0.874168935 0.867597108 0.828216625 0.738707787 0.780981799 1 15.21805516 -12.06836722 2.202409805 3.710730145 0.829535364 0.300861466 0.079879281 6165250.027 299333.1366 84298714.88 0.021087544 8.54E-13 12.06836722 -2.881194781 NALLS(ph)LAK ddPTM_A459_MK2206_30min_R2 1 NALLSLAK 8 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 1 NALLS(1)LAK 87.667 0.032149 11574000 41401 40744 35072 39701 32534 27766 48938 32837 26260 37300 TRUE FALSE 44570.69239 38720.71221 36241.28298 36457.3013 31256.55169 28822.65459 42512.38181 37128.90865 28544.04733 36082.90405 1.235230189 1.073104098 1.004389306 1.010376029 0.866242685 0.798789769 1.178186261 1.028988925 0.79106846 1 15.13902784 -4.59173261 1.111520079 0.954037983 1.465838532 0.389563948 0.109216552 2.680577835 2.092796219 0.035558147 1.779364112 2.56E-05 4.59173261 0.511800549 NALPPVLTTVNGQS(ph)PPEHSAPAK ddPTM_A459_MK2206_30min_R1 2 NALPPVLTTVNGQSPPEHSAPAK 23 0 Q6PKG0;A0A0B4J210;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 NALPPVLTTVNGQS(1)PPEHSAPAK;NALPPVLTT(0.001)VNGQS(0.999)PPEHSAPAK 137.31 2.99E-06 740140000 20176.6 21302.6 20849.3 19476.5 17328.5 15890.1 17516.7 18773.8 18095.5 15769.1 TRUE FALSE 18460.47422 19915.79687 19434.10761 20976.5834 16638.26915 16789.78373 16348.1929 18609.66265 19976.59198 17722.69516 1.041629055 1.123745384 1.09656615 1.18360008 0.938811451 0.947360634 0.922443949 1.050046987 1.127175737 1 14.1133104 -6.266609876 24.99814925 0.993868392 1.111209539 0.426059892 0.064586057 448.7437015 2169565.057 0.021296805 0.024872315 5.41E-07 6.266609876 0.117341147 NALPPVLTTVNGQS(ph)PPEHSAPAK ddPTM_A459_MK2206_30min_R2 4 NALPPVLTTVNGQSPPEHSAPAK 23 0 Q6PKG0;A0A0B4J210;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 NALPPVLT(0.002)TVNGQS(0.998)PPEHSAPAK;NALPPVLT(0.003)T(0.002)VNGQS(0.994)PPEHSAPAK;NALPPVLTTVNGQS(1)PPEHSAPAK;NALPPVLT(0.028)T(0.067)VNGQS(0.902)PPEHS(0.003)APAK 108.22 1.21E-05 753551000 2057793 2285665 2082034 2219177 2377753 1775392 2622930 1881959 1935552 2352719 TRUE FALSE 2215339.214 2172162.2 2151447.974 2037863.14 2284390.47 1842955.787 2278536.14 2127937.503 2103902.814 2275949.972 0.973369029 0.954398043 0.94529669 0.89539013 1.003708561 0.809752327 1.001136303 0.93496673 0.924406441 1 21.11803742 -10.62913503 4.478371221 1.000006223 0.937409457 0.108551981 0.053233077 3.10E-06 6.18E-07 0.048255157 0.011702431 2.35E-11 10.62913503 -0.062596766 NALTT(ph)LAGPLTPPVK ddPTM_A459_MK2206_30min_R2 1 NALTTLAGPLTPPVK 15 0 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4;H7C0W2 H0Y3X6 NELFA Negative elongation factor A 1 NALT(0.178)T(0.732)LAGPLT(0.09)PPVK 131.86 0.0015763 7370700 52567 62501 52694 60537 65110 49633 69147 48407 43529 69202 TRUE FALSE 56591.56994 59397.29122 54450.79166 55590.93345 62553.45425 51521.81859 60067.91584 54733.96111 47315.07374 66943.94441 0.845357567 0.887269069 0.813378897 0.830410188 0.934415425 0.769626275 0.897286773 0.817608846 0.706786464 1 16.03066594 NALTTLAGPLT(ph)PPVK ddPTM_A459_MK2206_30min_R2 1 NALTTLAGPLTPPVK 15 0 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4;H7C0W2 H0Y3X6 NELFA Negative elongation factor A 1 NALTTLAGPLT(1)PPVK 113.01 0.0067031 5323800 48951 46323 49370 48341 58061 45711 66328 39361 36453 58823 TRUE FALSE 52698.7262 44022.66718 51015.97116 44391.38566 55781.23341 47450.56414 57619.05393 44505.61785 39623.61605 56903.61033 0.926105143 0.773635749 0.896533117 0.780115452 0.980275822 0.833876161 1.012572903 0.78212292 0.696328683 1 15.79623257 -4.411695083 20.14989567 0.860341705 12.36478983 0.033838435 0.10297856 958.9962077 174160.86 0.024076631 1056.282405 3.88E-05 4.411695083 11.50444812 NAMS(ph)LPQLNEK ddPTM_A459_MK2206_30min_R1 4 NAMSLPQLNEK 11 0 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK 157.33 0.00055892 218053200 23984.1 23475.2 21510.4 19626.1 18747.9 17265.1 19622.5 19323.1 19308.2 17866.2 TRUE FALSE 21944.12635 21946.96021 20050.33398 21137.70562 18001.13144 18242.63504 18313.51883 19154.16017 21315.35649 20079.59974 1.092856762 1.092997893 0.998542513 1.052695567 0.896488559 0.908515871 0.91204601 0.953911454 1.061542897 1 14.29344289 -5.636488187 1.371939161 0.952237672 1.095928066 0.467600039 0.052963808 0.411971376 1.496975866 0.018185328 0.052660889 2.31E-06 5.636488187 0.143690394 NAMS(ph)LPQLNEK ddPTM_A459_MK2206_30min_R2 5 NAMSLPQLNEK 11 0 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK 142.39 0.00092532 137304500 533927 527971 501407 521941 541525 456779 605879 451064 463790 507097 TRUE FALSE 574804.8616 501752.7279 518123.6591 479296.7507 520262.0076 474162.0449 526326.3595 510019.6135 504129.6159 490550.4664 1.171754796 1.022836104 1.056208677 0.977059005 1.060567756 0.966591773 1.072930097 1.039688367 1.027681453 1 18.90404204 -4.760594975 24.98512216 1.026366722 1.171754966 0.635711568 0.033346007 12.59395284 372422.0464 0.007746479 0.045422897 1.74E-05 4.760594975 0.145388245 NANGFSGAPAEPDLS(ph)PR ddPTM_A459_MK2206_30min_R1 1 NANGFSGAPAEPDLSPR 17 0 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 NANGFSGAPAEPDLS(1)PR 176.85 3.61E-09 0 1266.5 1030.7 952.6 704.28 889.46 633.46 949.46 1086.1 983.12 813.49 TRUE FALSE 1158.777524 963.6012427 887.9401661 758.5237676 854.0309247 669.3259578 886.1232558 1076.604342 1085.318842 914.2712827 1.267432923 1.053955495 0.971199887 0.829648466 0.934111068 0.732086822 0.96921261 1.177554586 1.187086221 1 9.836478495 -9.97103663 10.96871338 0.999999962 1.00101862 0 0.157364047 0 0 0.166152361 0.040297867 1.07E-10 9.97103663 0.001018658 NANGFSGAPAEPDLS(ph)PR ddPTM_A459_MK2206_30min_R2 2 NANGFSGAPAEPDLSPR 17 0 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 NANGFSGAPAEPDLS(1)PR;NANGFSGAPAEPDLS(1)PR 199.31 6.27E-08 7522900 35728 35801 32384 29166 32394 27387.6 35053 25327.6 33180 31805 TRUE FALSE 38463.36315 34023.1744 33463.6664 26783.0445 31122.04879 28429.85431 30450.49899 28638.00428 36065.93642 30767.20545 1.25014159 1.105825956 1.087640749 0.870506245 1.011533168 0.924031087 0.989706362 0.930796407 1.172220093 1 14.90910579 -4.999045508 1.524598481 0.983525304 1.282804624 0.506085763 0.079186333 0.571316813 1.696011053 0.022182475 0.22880151 1.00E-05 4.999045508 0.299279321 NAPAAVDEGSIS(ph)PR ddPTM_A459_MK2206_30min_R1 4 NAPAAVDEGSISPR 14 0 A0A494C0S2;A0A090HNM7;A0A1W2PS85;R4GMW8;P28715 A0A494C0S2 ERCC5-201;BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells 1 NAPAAVDEGS(0.026)IS(0.974)PR;NAPAAVDEGS(0.001)IS(0.999)PR;NAPAAVDEGS(0.011)IS(0.989)PR;NAPAAVDEGS(0.002)IS(0.998)PR 180.56 7.39E-05 179110000 9959.1 10459.2 10013.6 9301.6 9634 9113.9 10217.3 9843.3 8197.99 8072.8 TRUE FALSE 9112.026248 9778.304179 9333.904731 10018.01084 9250.25738 9629.921142 9535.72256 9757.241066 9050.200397 9072.919411 1.004310282 1.077746174 1.028765308 1.104166188 1.019545855 1.061391676 1.051009287 1.075424637 0.997495953 1 13.14735113 -8.275389567 24.44703668 0.998747953 1.053656757 0.371599477 0.028095426 646.3859856 1132746.697 0.024224017 0.006401256 5.30E-09 8.275389567 0.054908804 NAPAAVDEGSIS(ph)PR ddPTM_A459_MK2206_30min_R2 4 NAPAAVDEGSISPR 14 0 A0A494C0S2;A0A090HNM7;A0A1W2PS85;R4GMW8;P28715 A0A494C0S2 ERCC5-201;BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells 1 NAPAAVDEGSIS(1)PR;NAPAAVDEGSIS(1)PR;NAPAAVDEGSIS(1)PR;NAPAAVDEGSIS(1)PR 198.61 7.99E-05 227385000 907140 801420 819557 963989 765625 728895 776977 578089 508775 623908 TRUE FALSE 976591.3359 761622.6482 846880.6213 885228.0151 735562.7155 756633.61 674958.9866 653647.2172 553027.3298 603549.9331 1.618078774 1.26190495 1.403165794 1.466702201 1.218727193 1.253638794 1.118315072 1.083004374 0.916290931 1 19.20311361 -7.070208562 0.675651967 0.954214934 1.450103674 0.792397973 0.093771935 0.327526506 0.309966275 0.075606989 0.059079664 8.51E-08 7.070208562 0.495888739 NAS(ph)ASFQELEDK ddPTM_A459_MK2206_30min_R1 2 NASASFQELEDK 12 0 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 "DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed" 1 NAS(0.93)AS(0.07)FQELEDK;NAS(0.5)AS(0.5)FQELEDK 270.21 9.41E-34 54798000 7914.4 8641.7 8700.3 5475.3 4178.8 5248.6 6626.1 4371 7514.5 8846.8 TRUE FALSE 7241.23872 8079.123759 8109.747876 5897.008555 4012.349547 5545.771196 6184.084959 4332.784808 8295.659166 9942.808374 0.728289076 0.812559536 0.815639563 0.59309285 0.403542882 0.55776708 0.621965618 0.435770724 0.834337629 1 13.27943769 -10.18636447 10.49843306 0.999999988 0.636742683 0.346096748 0.146107103 0 0 0.152299982 0.036938171 6.51E-11 10.18636447 -0.363257305 NAS(ph)ASFQELEDK ddPTM_A459_MK2206_30min_R2 1 NASASFQELEDK 12 0 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 "DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed" 1 NAS(0.963)AS(0.037)FQELEDK 156.72 0.00043793 40461000 28594 15285 17309 15806 12203 10315 19287 15406 9849.4 14276 TRUE FALSE 30783.17863 14525.96913 17886.07342 14514.59924 11723.8489 10707.54455 16754.59373 17419.6171 10706.08301 13810.17529 2.229021571 1.051830902 1.295137321 1.051007604 0.84892832 0.775337339 1.21320645 1.261361042 0.775231508 1 13.75344401 -2.982159652 1.435457957 1.016178082 199.9999999 0.785605459 0.186085996 106.8638469 1.761842511 0.054236928 68671.61764 0.001041934 2.982159652 198.9838219 up NAS(ph)ASFQELEDKK ddPTM_A459_MK2206_30min_R2 1 NASASFQELEDKK 13 1 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 "DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed" 1 NAS(0.924)AS(0.076)FQELEDKK 122.96 0.0045726 6950700 50935 33735 41841 28870 25453 18473 34972 24362 14101 37325 TRUE FALSE 54834.62276 32059.76896 43235.95806 26511.22865 24453.58733 19176.00296 30380.13439 27546.19705 15327.47949 36107.08831 1.518666426 0.8879079 1.197436849 0.734238896 0.677251711 0.531086938 0.841389761 0.762902752 0.424500568 1 15.13999446 -1.522881473 0.565974666 0.686445933 39.97191617 0.592898815 0.194038429 97.82695618 0.85094618 0.090541809 4699.943637 0.029999812 1.522881473 39.28547023 NAS(ph)NLER ddPTM_A459_MK2206_30min_R2 1 NASNLER 7 0 Q86V48-2;Q86V48-3;Q86V48;E5RFK8 Q86V48-2 LUZP1 Leucine zipper protein 1 1 NAS(1)NLER 80.916 0.043999 41901000 66975 89496 64393 85527 75470 80692 95760 68248 69639 67911 TRUE FALSE 72102.6575 85051.75878 66539.83048 78539.17051 72506.66859 83762.7906 83186.59697 77168.24793 75696.07434 65695.06963 1.097535293 1.294644473 1.012858817 1.19551088 1.103685086 1.275024002 1.266253273 1.174642913 1.152233718 1 16.00349748 -8.788787891 2.656978924 1.000036798 1.179890078 0.284355869 0.083930184 2.138830462 19.73708897 0.079340606 0.021286971 1.63E-09 8.788787891 0.17985328 NAS(ph)VPNLR ddPTM_A459_MK2206_30min_R1 2 NASVPNLR 8 0 E9PLD2;Q9H019-3;Q9H019;E9PPF9;E9PNJ0;E9PPQ0;E9PRW1;E9PSD6;C9JF50;E9PLU1;E9PRK5;Q9H019-2 E9PLD2 MTFR1L Mitochondrial fission regulator 1-like 1 NAS(1)VPNLR;NAS(1)VPNLR 99.788 0.018368 167541000 7564.3 7142.1 8348.2 6933 7662.2 6194.1 7187.4 7223.8 6401.6 5899.1 TRUE FALSE 6920.916563 6677.147992 7781.547443 7466.980861 7356.998349 6544.804589 6707.94166 7160.643078 7067.069228 6629.925044 1.04389062 1.007122697 1.173700667 1.12625419 1.109665388 0.987161174 1.011767345 1.080048874 1.065935012 1 12.69477684 -6.742765058 24.99647896 1.032909578 1.093832133 0.286223625 0.049627912 373.8339751 500393.416 0.017929068 0.017900448 1.81E-07 6.742765058 0.060922555 NAS(ph)VPNLR ddPTM_A459_MK2206_30min_R2 4 NASVPNLR 8 0 E9PLD2;Q9H019-3;Q9H019;E9PPF9;E9PNJ0;E9PPQ0;E9PRW1;E9PSD6;C9JF50;E9PLU1;E9PRK5;Q9H019-2 E9PLD2 MTFR1L Mitochondrial fission regulator 1-like 1 NAS(1)VPNLR;NAS(1)VPNLR;NAS(1)VPNLR;NAS(1)VPNLR 106.4 0.013744 214088000 209657 230895 236242 257855 254513 246506 296546 181265 210131 233427 TRUE FALSE 225708.5011 219429.0901 244118.1904 236787.4217 244519.5408 255886.9586 257609.154 204956.9579 228407.8146 225810.2961 0.999549201 0.971740854 1.081076437 1.048612157 1.082853816 1.13319438 1.140821116 0.907651074 1.0115031 1 17.78475174 -7.766484352 24.9999761 0.969682832 1.065039289 0.367695872 0.055445453 148.5355056 736037.6586 0.03180655 0.016023148 1.71E-08 7.766484352 0.095356457 NAS(ph)VYSPSGPVNR ddPTM_A459_MK2206_30min_R1 2 NASVYSPSGPVNR 13 0 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 NAS(0.897)VYS(0.094)PS(0.009)GPVNR;NAS(0.747)VYS(0.193)PS(0.059)GPVNR 214.48 1.88E-06 20922000 4218.6 3834.7 3663.3 3000.9 3314.5 3253.5 3634 3505 3175.6 3216.3 TRUE FALSE 3859.785917 3585.060333 3414.645403 3232.029838 3182.476446 3437.710358 3391.582491 3474.356155 3505.714984 3614.759526 1.067784977 0.991783909 0.944639713 0.894120291 0.880411663 0.951020485 0.938259507 0.961158309 0.969833528 1 11.81968396 -4.890494805 2.15498027 0.937212232 1.085920882 0.576568842 0.033045489 0.371204687 2.39994017 0.009392297 0.099302534 1.29E-05 4.890494805 0.148708649 NAS(ph)VYSPSGPVNR ddPTM_A459_MK2206_30min_R2 1 NASVYSPSGPVNR 13 0 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 NAS(0.93)VYS(0.062)PS(0.007)GPVNR 164.93 0.00036255 12018000 22249 20844 18052 20992 17455 18793 22720 17600 15554 21645 TRUE FALSE 23952.40055 19808.91727 18653.84467 19276.88645 16769.629 19508.18078 19736.83671 19900.38043 16906.8588 20938.72542 1.143928299 0.946042172 0.890877754 0.920633232 0.80089063 0.931679479 0.942599719 0.950410306 0.807444506 1 14.35388601 -4.755559574 3.017034743 0.903125825 1.191870282 0.597409881 0.058390926 0.279754164 3.505516891 0.014467579 0.203489771 1.76E-05 4.755559574 0.288744457 NASAS(ph)FQELEDK ddPTM_A459_MK2206_30min_R1 2 NASASFQELEDK 12 0 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 "DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed" 1 NAS(0.073)AS(0.927)FQELEDK;NAS(0.051)AS(0.949)FQELEDK 263.15 2.13E-25 51945000 5314.5 5650.8 5669.1 3608.6 2725.79 3452.5 4263.5 2801.1 4883.5 5726.6 TRUE FALSE 4862.473867 5282.931893 5284.297287 3886.534997 2617.216012 3647.977566 3979.089694 2776.610278 5391.157301 6436.054442 0.755505397 0.820833935 0.821046083 0.603869192 0.406649141 0.566803404 0.61824985 0.431414977 0.837649425 1 12.65196081 -10.72676283 7.274239417 1.000000578 0.642792083 0.328325723 0.149158448 1.51E-06 1.65E-07 0.155836295 0.037795792 1.88E-11 10.72676283 -0.357208495 NASAS(ph)FQELEDK ddPTM_A459_MK2206_30min_R2 3 NASASFQELEDK 12 0 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 "DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed" 1 NAS(0.089)AS(0.911)FQELEDK;NAS(0.007)AS(0.993)FQELEDK;NAS(0.1)AS(0.9)FQELEDK 201.16 8.37E-05 99704000 199989 130115 138013 115436 105222 70042 126458 106659 61928 123451 TRUE FALSE 215300.3116 123653.6783 142614.2845 106004.5095 101090.4556 72707.49739 109853.9127 120599.6975 67314.3855 119422.804 1.802840868 1.035427692 1.194196416 0.887640434 0.846492062 0.608824236 0.919873835 1.009854848 0.56366442 1 16.86571882 -1.522878745 0.759194132 0.827296011 177.4778957 0.741531618 0.166139081 194.6384319 0.80896826 0.060076819 58869.24936 0.03 1.522878745 176.6505997 NASAS(ph)FQELEDKK ddPTM_A459_MK2206_30min_R1 1 NASASFQELEDKK 13 1 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 "DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed" 1 NAS(0.079)AS(0.921)FQELEDKK 237.05 2.33E-17 5999500 1851.4 2006.6 1871.8 1382.6 1237.5 1184.7 1785.8 1125.3 1696.1 2088.8 TRUE FALSE 1693.928708 1875.969975 1744.747431 1489.088092 1188.207755 1251.77669 1666.67254 1115.461621 1872.415665 2347.576314 0.721564917 0.799109262 0.743212232 0.634308705 0.506142334 0.533220872 0.709954573 0.475154573 0.797595228 1 11.19695634 -8.52799421 22.7154486 1.000000005 0.642709363 0.550212448 0.10202222 131.1944438 582578.1938 0.106882302 0.027596892 2.96E-09 8.52799421 -0.357290642 NASAS(ph)FQELEDKK ddPTM_A459_MK2206_30min_R2 2 NASASFQELEDKK 13 1 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 "DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed" 1 NAS(0.094)AS(0.906)FQELEDKK;NAS(0.301)AS(0.699)FQELEDKK 180.7 0.00020284 16966900 92980 57945 68471 54315 41864 24389 55251 48078 27240 64607 TRUE FALSE 100098.6203 55067.53556 70753.78897 49877.29075 40220.20901 25317.14049 47996.47733 54361.95968 29609.28596 62498.87888 1.601606654 0.881096374 1.132080931 0.798050967 0.643534888 0.405081514 0.767957413 0.869806957 0.473757074 1 15.93154269 -1.522878745 0.671666842 0.688696037 90.09742534 0.624436361 0.199465225 159.3831701 0.946638879 0.081004526 21287.53429 0.03 1.522878745 89.4087293 NASVYS(ph)PSGPVNRR ddPTM_A459_MK2206_30min_R1 2 NASVYSPSGPVNRR 14 1 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 NASVY(0.004)S(0.75)PS(0.246)GPVNRR;NASVYS(0.763)PS(0.237)GPVNRR 113.43 0.0059203 7022600 2492.66 2804.1 2889.3 2699 3010.1 2388.13 2493.4 2977.1 1930.83 1558.19 TRUE FALSE 2280.646178 2621.55258 2693.182366 2906.877448 2890.201343 2523.343857 2327.069835 2951.071529 2131.546688 1751.230341 1.302310795 1.496977593 1.537880142 1.659905827 1.650383319 1.440897749 1.328819962 1.685141845 1.217170944 1 10.77415314 -8.491694103 4.729406244 1.000995953 1.512845355 0.646577377 0.124626318 0.103547335 6.124584624 0.123584047 0.032204759 3.22E-09 8.491694103 0.511849401 NAT(ph)SPQVQR ddPTM_A459_MK2206_30min_R2 1 NATSPQVQR 9 0 A0A087WZ06;Q13188;Q13188-2 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 NAT(0.5)S(0.5)PQVQR 120.77 0.01514 4791200 48134 27704 30024 33903 28606 29547 37962 34836 20013 34236 TRUE FALSE 51819.17605 26328.25965 31024.98517 31133.01645 27482.78471 30671.43179 32977.5438 39389.18481 21753.69456 33118.88212 1.564641459 0.794962208 0.93677634 0.940038264 0.829822233 0.926101058 0.995732394 1.189327124 0.656836619 1 15.01536636 -4.754219416 24.99987219 0.925830809 1.564642573 0.677036127 0.13373166 147.0853117 509254.7875 0.03204064 0.319331423 1.76E-05 4.754219416 0.638811764 NATDLQNS(ph)SMSEEELTK ddPTM_A459_MK2206_30min_R1 3 NATDLQNSSMSEEELTK 17 0 Q5QNY5;H0YJ60;P40855-5;P40855 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 NATDLQNS(0.786)S(0.096)MS(0.118)EEELTK;NATDLQNS(0.992)S(0.007)MSEEELTK;NATDLQNS(0.363)S(0.306)MS(0.332)EEELTK 292.2 6.71E-76 41906400 15119.5 15767.2 16321.6 14438.7 13996.9 12254.1 15134.4 15025.4 13795.7 12526.3 TRUE FALSE 13833.50713 14740.75241 15213.73527 15550.77118 13439.37383 12947.91655 14124.81179 14894.03451 15229.81238 14078.15261 0.98262233 1.04706582 1.080662761 1.104603111 0.954626236 0.919717019 1.003314297 1.057953762 1.081804751 1 13.78117041 -3.71278744 10.19920622 1.024029257 1.029499118 0 0.057565557 0 0 0.014522128 0 0.000193737 3.71278744 0.005469861 NATDLQNS(ph)SMSEEELTK ddPTM_A459_MK2206_30min_R2 1 NATDLQNSSMSEEELTK 17 0 Q5QNY5;H0YJ60;P40855-5;P40855 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 NATDLQNS(0.88)S(0.118)MS(0.002)EEELTK 307.55 5.85E-103 30175000 60746 52690 56326 54748 63198 44515 67563 47650 42132 56229 TRUE FALSE 65396.76047 50073.49122 58203.88073 50274.91327 60716.52898 46209.04952 58691.89694 53878.01861 45796.5652 54394.25233 1.202273359 0.920565852 1.070037334 0.924268854 1.116230601 0.849520814 1.079009168 0.990509407 0.84193758 1 15.73116659 -4.75160373 24.98516633 0.98143172 1.202273807 0.363274896 0.089331743 430.7790413 1094217.396 0.020602901 0.268082125 1.77E-05 4.75160373 0.220842088 NATDLQNSS(ph)MSEEELTK ddPTM_A459_MK2206_30min_R1 2 NATDLQNSSMSEEELTK 17 0 Q5QNY5;H0YJ60;P40855-5;P40855 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 NATDLQNS(0.185)S(0.63)MS(0.185)EEELTK;NATDLQNS(0.17)S(0.513)MS(0.314)EEELT(0.002)K 357.28 1.48E-176 29925600 7272.4 7563.5 8564.1 6453.2 6722.2 5470.7 6873.3 7071.9 6982.4 5871 TRUE FALSE 6653.844191 7071.114775 7982.792753 6950.226582 6454.44054 5780.446306 6414.794698 7010.071124 7708.245467 6598.343804 1.00841126 1.071649945 1.209817644 1.053328955 0.978191002 0.876045032 0.972182549 1.062398586 1.168209129 1 12.68788824 -4.365115378 7.529855433 1.041430774 0.500061231 0.01260896 0.091534357 11525.06085 20993.73474 0.025417944 97711.31672 4.31E-05 4.365115378 -0.541369543 NATDLQNSS(ph)MSEEELTK ddPTM_A459_MK2206_30min_R2 3 NATDLQNSSMSEEELTK 17 0 Q5QNY5;H0YJ60;P40855-5;P40855 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 NATDLQNS(0.151)S(0.83)MS(0.019)EEELTK;NATDLQNS(0.065)S(0.718)MS(0.217)EEELTK;NATDLQNS(0.082)S(0.87)MS(0.048)EEELTK 294.39 3.61E-76 44983800 209595 217327 215619 205918 233563 170890 235910 175006 162921 223621 TRUE FALSE 225641.7544 206534.8572 222807.6298 189093.8407 224392.1431 177393.3387 204934.7336 197879.8851 177091.5741 216324.2651 1.043071864 0.954746603 1.029970585 0.874122192 1.037295298 0.820034399 0.947349728 0.91473735 0.818639435 1 17.72283598 -5.645499808 0.71258518 0.903176516 1.033556114 0.227953621 0.071380029 1.713941425 1.378685407 0.034145067 0.151867737 2.26E-06 5.645499808 0.130379599 NATDLQNSSMS(ph)EEELTK ddPTM_A459_MK2206_30min_R1 1 NATDLQNSSMSEEELTK 17 0 Q5QNY5;H0YJ60;P40855-5;P40855 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 NATDLQNS(0.053)S(0.204)MS(0.743)EEELTK 349.19 2.99E-175 18453000 3509.3 3178.5 3058.5 3079.9 3172 2159.6 3119.9 3108.5 2705.9 2375 TRUE FALSE 3210.815607 2971.579072 2850.897541 3317.114432 3045.652523 2281.874686 2911.777164 3081.322712 2987.187988 2669.23293 1.202898245 1.113270797 1.068058733 1.24272198 1.141021635 0.854880314 1.090866642 1.154385096 1.119118513 1 11.38220949 -6.558301934 24.99999853 1.049939195 1.152870566 0.280138266 0.087891356 274.7128163 193877.5103 0.030492169 0.030492293 2.77E-07 6.558301934 0.102931371 NATDLQNSSMS(ph)EEELTK ddPTM_A459_MK2206_30min_R2 1 NATDLQNSSMSEEELTK 17 0 Q5QNY5;H0YJ60;P40855-5;P40855 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 NATDLQNS(0.02)S(0.205)MS(0.775)EEELTK 149.86 0.00028206 11058000 96601 108090 116970 116200 122930 88140 137120 87915 90897 116350 TRUE FALSE 103996.8468 102722.4078 120869.7214 106706.0883 118103.1505 91494.22946 119115.9793 99405.79236 98803.05676 112553.509 0.92397694 0.912653978 1.073886745 0.948047637 1.049306695 0.812895398 1.058305337 0.883186968 0.877831865 1 16.78025151 -6.716401351 24.99984181 0.927382793 0.981011209 0.108734111 0.078887491 319.6841277 177450.1489 0.025296151 0.025296033 1.92E-07 6.716401351 0.053628416 NATS(ph)PQVQR ddPTM_A459_MK2206_30min_R2 1 NATSPQVQR 9 0 A0A087WZ06;Q13188;Q13188-2 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 NAT(0.022)S(0.978)PQVQR 117.25 0.0075913 5184800 43381 28059 25186 29949 23773 22434 30753 21479 18811 30943 TRUE FALSE 46702.28271 26665.63086 26025.68867 27502.0709 22839.55257 23287.74159 26715.09416 24286.37905 20447.14678 29933.33244 1.560209937 0.89083402 0.869455104 0.918777451 0.763014028 0.777986936 0.892486468 0.81134899 0.683089556 1 14.86946528 -4.757096133 4.343126277 0.834891522 1.630335298 0.867076085 0.08417697 0.073144054 2.863550301 0.020745587 0.185606759 1.75E-05 4.757096133 0.795443776 NATS(ph)PQVQRPSFMDYFDK ddPTM_A459_MK2206_30min_R1 1 NATSPQVQRPSFMDYFDK 18 1 A0A087WZ06;Q13188;Q13188-2 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 NAT(0.078)S(0.572)PQVQRPS(0.338)FMDY(0.013)FDK 75.877 0.0082872 10199000 1945.8 1705.6 1830.7 1553.6 1511.6 1479.3 1513.5 1424.4 2067.2 2030.1 TRUE FALSE 1780.299492 1594.56513 1706.437185 1673.258541 1451.389771 1563.056688 1412.537177 1411.946621 2282.092838 2281.604114 0.780284135 0.698878968 0.747911162 0.733369356 0.636126908 0.685069192 0.619098277 0.618839444 1.000214202 1 11.15583277 -8.269448872 24.98277318 1.000107177 0.689306206 0.853185489 0.051464029 243.7342013 760232.6663 0.050309927 0.013911028 5.38E-09 8.269448872 -0.310800972 NAVALS(ph)ASPQLK ddPTM_A459_MK2206_30min_R2 1 NAVALSASPQLK 12 0 Q92547;A0A2R8YD63 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 1 NAVALS(0.807)AS(0.193)PQLK 115.68 0.0051967 7667600 49814 53864 52840 52447 48115 43603 63108 44872 37721 56402 TRUE FALSE 53627.79814 51189.19209 54601.65923 48161.91233 46225.76334 45262.34272 54821.84379 50736.92447 41001.9044 54561.60736 0.982885233 0.938190691 1.000734067 0.882706992 0.847221436 0.829563954 1.004769589 0.929901572 0.751479041 1 15.73559853 -5.771880613 24.96885197 0.889516001 0.970362066 0.205890873 0.073293268 322.7526529 771821.4826 0.020674777 0.031045685 1.69E-06 5.771880613 0.080846065 NAVALSAS(ph)PQLK ddPTM_A459_MK2206_30min_R2 2 NAVALSASPQLK 12 0 Q92547;A0A2R8YD63 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 1 NAVALS(0.369)AS(0.631)PQLK;NAVALS(0.149)AS(0.851)PQLK 120.54 0.0040062 13690200 127018 135236 138282 128904 141752 108309 173263 120176 106181 152313 TRUE FALSE 136742.5957 128520.3769 142892.2529 118372.1309 136186.1042 112430.7749 150513.36 135883.4158 115416.4314 147343.0393 0.928056028 0.872252789 0.969793032 0.803377828 0.924279185 0.763054539 1.021516596 0.922224874 0.783317841 1 17.16881938 -7.278110034 24.99191735 0.925283544 0.879642852 0.095091144 0.081813243 2567.130904 3848514.872 0.033335845 0.022543924 5.27E-08 7.278110034 -0.045640692 NAVASVQNGPGGGPS(ph)SSSIGSASKSDESSTEETDKSR ddPTM_A459_MK2206_30min_R2 1 NAVASVQNGPGGGPSSSSIGSASKSDESSTEETDKSR 37 2 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y815 A0A0C4DG98 THOC2 THO complex subunit 2 1 NAVASVQNGPGGGPS(0.18)S(0.18)S(0.18)S(0.18)IGS(0.18)AS(0.051)KS(0.041)DES(0.002)S(0.002)T(0.002)EET(0.001)DKS(0.001)R 60.979 7.15E-05 4394800 4889.7 10029 9317.7 4163.8 6683.1 4921 8176.9 3623.9 3474.6 6328.7 TRUE FALSE 5264.059192 9530.974444 9628.347467 3823.604221 6420.687914 5108.272103 7103.263208 4097.556173 3776.814427 6122.195037 0.859831998 1.556790397 1.572695317 0.624547927 1.048755859 0.834385718 1.160247781 0.669295269 0.616905277 1 12.57983329 -5.760560259 24.99998459 0.857295752 1.352474364 0.432769126 0.250912113 21.3577126 607319.3154 0.06925109 0.111566192 1.74E-06 5.760560259 0.495178612 NAVEEYVYEFR ddPTM_A459_MK2206_30min_R1 1 NAVEEYVYEFR 11 0 Q92598-2;Q92598;Q92598-3;Q92598-4;A0A0A0MSM0 Q92598-2 HSPH1 Heat shock protein 105 kDa 0 147.62 0.0091865 8940100 2883 3142.4 3449.2 2832.6 3140.1 2643.2 3704 2757.1 3087.7 3071.7 FALSE TRUE 2637.785711 2937.829189 3215.077914 3050.767343 3015.023168 2792.8557 3456.912918 2732.994965 3408.677464 3452.245386 0.764078278 0.850990836 0.931300517 0.883705242 0.87335135 0.808996867 1.001352028 0.791657214 0.987379831 1 11.7533193 -14.52287661 0.018984471 2.122720311 4.62E-12 0.340170562 0.067772348 4503.508453 6.451499663 479.3186779 269.8282755 3.00E-15 14.52287661 -2.122720311 NAVEEYVYEMR ddPTM_A459_MK2206_30min_R2 1 NAVEEYVYEMR 11 0 A0A087WYC1;P34932 A0A087WYC1 HSPA4 Heat shock 70 kDa protein 4 0 133.42 0.025264 2586300 13053 16662 12301 13690 21031 12410 15434 13472 14742 15989 FALSE TRUE 14052.34772 15834.58931 12711.1092 12571.48321 20205.21727 12882.27125 13407.49726 15232.83666 16024.23251 15467.28024 0.908520923 1.023747489 0.821806355 0.812779171 1.306319984 0.832872428 0.866829659 0.984842611 1.036008417 1 13.91693192 -6.685118086 0.212285698 1.014170674 0.897543501 0.029419982 0.13941447 28.68245628 2.935131087 0.401076962 1.022526719 2.06E-07 6.685118086 -0.116627173 NAWGS(ph)IER ddPTM_A459_MK2206_30min_R2 1 NAWGSIER 8 0 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 NAWGS(1)IER 98.04 0.019782 3477200 13382 12627 12332 14621 11755 9419.4 13927 10395 10902 13014 TRUE FALSE 14406.53621 11999.96154 12743.14273 13426.41753 11293.43964 9777.861867 12098.36817 11753.66219 11850.23625 12589.35425 1.144342746 0.953183246 1.012215756 1.066489771 0.897062662 0.776676998 0.9609999 0.933619149 0.941290238 1 13.61991666 -1.522878748 0.565393632 0.923494048 10.70145909 0.38759826 0.073232477 161.7170436 1.409337896 0.037541897 1931.390835 0.03 1.522878748 9.777965041 NCES(ph)DTEEDIAR ddPTM_A459_MK2206_30min_R1 2 NCESDTEEDIAR 12 0 Q9UIK4 Q9UIK4 DAPK2 Death-associated protein kinase 2 1 NCES(0.889)DT(0.111)EEDIAR;NCES(0.984)DT(0.016)EEDIAR 216.54 5.28E-08 7038100 1894.51 2254.9 2125.3 1894.08 1943.23 1651.28 1785.94 1693.58 1926.11 1924.42 TRUE FALSE 1733.371976 2108.1056 1981.040557 2039.96237 1865.827034 1744.774047 1666.803201 1678.773209 2126.336027 2162.831678 0.801436373 0.974697024 0.915947634 0.943190536 0.862677874 0.806708198 0.770657845 0.77619226 0.983125986 1 11.07870568 -6.424898726 5.841229147 0.846014718 0.913599348 0.026007868 0.084750015 0.509828611 24.9055261 0.026076041 0.029483363 3.76E-07 6.424898726 0.06758463 NCES(ph)DTEEDIAR ddPTM_A459_MK2206_30min_R2 1 NCESDTEEDIAR 12 0 Q9UIK4 Q9UIK4 DAPK2 Death-associated protein kinase 2 1 NCES(0.999)DT(0.001)EEDIAR 146.1 0.0006654 7085400 18898 19988 22593 22335 23346 16379 23981 16306 16690 20517 TRUE FALSE 20344.84541 18995.42499 23346.23934 20510.15905 22429.31874 17002.31432 20832.26589 18437.25019 18141.66603 19847.53197 1.025056689 0.957067358 1.176279216 1.033385868 1.130080998 0.856646275 1.049614931 0.928944224 0.914051483 1 14.276672 -6.752561916 24.99964821 0.951645612 1.062907926 0.378646521 0.073322224 215.3308186 606388.0029 0.023979847 0.023637603 1.77E-07 6.752561916 0.111262314 NCGEIFCNACSDNELPLPSS(ph)PKPVR ddPTM_A459_MK2206_30min_R2 1 NCGEIFCNACSDNELPLPSSPKPVR 25 1 H0YD93;Q8WXA3;Q8WXA3-3;Q8WXA3-1 H0YD93 RUFY2 RUN and FYVE domain-containing protein 2 1 NCGEIFCNACSDNELPLPS(0.227)S(0.772)PKPVR 97.128 3.49E-06 3213500 18466 18762 18363 19008 21573 15393 21815 16161 14603 20746 TRUE FALSE 19879.77116 17830.30636 18975.21325 17454.9856 20725.93562 15978.7914 18950.6643 18273.29819 15873.14254 20069.05972 0.99056814 0.888447521 0.945495879 0.869746059 1.032730776 0.796190336 0.944272655 0.910520894 0.790926071 1 14.2926854 -6.764536987 24.99882472 0.886282738 0.938036356 0.12878392 0.072798608 187.4452104 1512734.547 0.023769262 0.021847317 1.72E-07 6.764536987 0.051753618 NCIVLIDSTPYR ddPTM_A459_MK2206_30min_R1 1 NCIVLIDSTPYR 12 0 P62241;Q5JR95 P62241 RPS8 40S ribosomal protein S8 0 145.91 0.0092857 9202500 1475 1593.4 1589.5 1305.6 1243.1 1346.5 1408.4 1474.2 1287.9 1356.9 FALSE TRUE 1349.543504 1489.66937 1481.609169 1406.157538 1193.584695 1422.737666 1314.448206 1461.311225 1421.781814 1525.003016 0.88494481 0.976830442 0.971545074 0.922068693 0.78267694 0.932940887 0.861931545 0.958234974 0.9323141 1 10.57459638 -10.6546555 4.741864747 1.000006567 0.914020322 0.178755173 0.055476373 1.04634E+11 19157094328 7754564.347 0.014010881 2.21E-11 10.6546555 -0.085986245 NCIVLIDSTPYR ddPTM_A459_MK2206_30min_R2 2 NCIVLIDSTPYR 12 0 P62241;Q5JR95 P62241 RPS8 40S ribosomal protein S8 0 ; 143.79 0.011033 5112800 20686.5 30428 28571 27506 32042 27132 25772.4 22938 26134 29679 FALSE TRUE 22270.27435 28916.98977 29523.54288 25258.67181 30783.87008 28164.52727 22388.45292 25936.07536 28407.08808 28710.57666 0.775681889 1.007189445 1.028315914 0.879768878 1.072213576 0.980980898 0.779798093 0.903363094 0.989429381 1 14.80929469 -9.892839147 15.2592757 1.000000598 0.938289806 0.038829299 0.09561943 0 0 0.093418791 0.022657385 1.28E-10 9.892839147 -0.061710793 NCLTNFHGMDLTR ddPTM_A459_MK2206_30min_R1 1 NCLTNFHGMDLTR 13 0 D6RAT0;P61247;D6RG13;D6RB09;D6RAS7;H0Y8L7;E9PFI5;D6RED7 D6RAT0 RPS3A 40S ribosomal protein S3a 0 130.66 0.0022517 10999000 2360.6 2961.5 3301.1 2406.6 2496.7 2177.8 2257.1 2485 2314.7 2349.6 FALSE TRUE 2159.818574 2768.705812 3077.030529 2591.956749 2397.251152 2301.105154 2106.532977 2463.273907 2555.321348 2640.686187 0.817900508 1.048479681 1.165238999 0.981546676 0.907813721 0.871404245 0.797721815 0.932815841 0.967673236 1 11.36669715 -6.172451519 4.165240157 0.901560096 1.021810897 0.171170729 0.094924689 0.344870654 10.83458535 0.029707483 0.038831661 6.72E-07 6.172451519 0.120250801 NCPAVTLT(ph)SPAK ddPTM_A459_MK2206_30min_R1 2 NCPAVTLTSPAK 12 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 NCPAVT(0.014)LT(0.493)S(0.493)PAK;NCPAVT(0.001)LT(0.5)S(0.5)PAK 194.98 0.00028613 42351000 19174.6 19557.4 20867.6 17387.8 14124.8 11753.3 14606.6 15630 17597.2 16505.9 TRUE FALSE 17543.69958 18284.20971 19451.16545 18727.01137 13562.17931 12418.76169 13632.22037 15493.34856 19426.49191 18550.77551 0.945712462 0.985630477 1.048536513 1.009500188 0.731084224 0.669447037 0.734859864 0.835186031 1.047206458 1 14.17919188 -6.246147824 24.06833748 0.81464219 1.000164736 0.315464154 0.113533157 563.0497762 886217.9588 0.035304737 0.045379543 5.67E-07 6.246147824 0.185522546 NCPAVTLT(ph)SPAK ddPTM_A459_MK2206_30min_R2 1 NCPAVTLTSPAK 12 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 NCPAVT(0.001)LT(0.742)S(0.257)PAK 153.49 0.0010933 68524000 464410 429490 385030 382780 462060 363340 478910 368990 364100 523940 TRUE FALSE 499965.5867 408162.1511 397866.708 351505.6495 443917.2027 377167.1583 416028.5417 417218.2599 395768.7599 506843.8807 0.986429166 0.805301527 0.784988678 0.693518582 0.875846034 0.744148588 0.82082187 0.823169177 0.780849439 1 18.95118191 -10.68890775 5.390187908 1.000006118 0.808618048 0.3623228 0.074324764 5.34E-06 8.27E-07 0.07037225 0.017067232 2.05E-11 10.68890775 -0.19138807 NCPPS(ph)PLPLISK ddPTM_A459_MK2206_30min_R1 2 NCPPSPLPLISK 12 0 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 NCPPS(0.776)PLPLIS(0.224)K;NCPPS(0.915)PLPLIS(0.085)K 115.91 0.0051408 40707000 8693.6 10777.1 7674.5 8068.4 6618.8 6156 5425.7 4452.9 4750.7 4100.4 TRUE FALSE 7954.163668 10075.50883 7153.576322 8689.829566 6355.15918 6504.5474 5063.761453 4413.968765 5244.552266 4608.388508 1.726018467 2.18634102 1.552294541 1.885654725 1.379041539 1.411458124 1.098813922 0.957811772 1.138044732 1 12.17004663 -6.617941397 0.839100172 1.002418402 1.922006955 0.810131224 0.168076497 0.235491563 0.365937219 0.09650796 0.106477528 2.41E-07 6.617941397 0.919588553 NCPPS(ph)PLPLISK ddPTM_A459_MK2206_30min_R2 4 NCPPSPLPLISK 12 0 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 NCPPS(0.989)PLPLIS(0.011)K;NCPPS(0.981)PLPLIS(0.019)K;NCPPS(1)PLPLISK;NCPPS(1)PLPLISK 149.35 0.00057855 48453100 229025 263747 229957 237532 212568 182573 216628 150566 153941 169405 TRUE FALSE 246559.3301 250649.7075 237623.6516 218124.8758 204221.5123 189520.9434 188184.4834 170245.4932 167330.5099 163877.3287 1.504535936 1.529495931 1.450009305 1.331025331 1.246185265 1.156480551 1.148325304 1.038859338 1.021071744 1 17.32225676 -6.293707212 0.550412635 0.997903803 1.595631911 0.984160339 0.024127374 0.125308941 0.077334798 0.019289878 0.038821081 5.09E-07 6.293707212 0.597728108 NCPS(ph)PVLIDCPHPNCNK ddPTM_A459_MK2206_30min_R2 3 NCPSPVLIDCPHPNCNK 17 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 NCPS(1)PVLIDCPHPNCNK;NCPS(1)PVLIDCPHPNCNK;NCPS(1)PVLIDCPHPNCNK 210.43 3.43E-09 21849200 103595 89159 87784 109109 88627 75477 117334 93004 66984 112147 TRUE FALSE 111526.3129 84731.49371 90710.67475 100194.4457 85147.05867 78349.33012 101927.9049 105159.9421 72810.14724 108487.6526 1.028009273 0.781024307 0.836138239 0.923556214 0.784854835 0.722195828 0.939534615 0.969326367 0.671137641 1 16.72717133 -10.32427533 17.13561625 1 0.850704775 0.146605639 0.108105833 0 0 0.10139225 0.024591233 4.74E-11 10.32427533 -0.149295225 NCPS(ph)PVLIDCPHPNCNKK ddPTM_A459_MK2206_30min_R1 2 NCPSPVLIDCPHPNCNKK 18 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 NCPS(1)PVLIDCPHPNCNKK;NCPS(1)PVLIDCPHPNCNKK 96.435 0.0025837 100530000 11300.3 12507 12606.3 11408.7 11278.8 9389.3 9881.9 10941.5 9002.1 8500.1 TRUE FALSE 10339.15014 11692.79203 11750.61948 12287.40005 10829.54151 9920.914052 9222.696482 10845.83962 9937.900509 9553.15656 1.082275799 1.223971569 1.230024799 1.286213617 1.133608713 1.038495914 0.965408284 1.135314757 1.040274013 1 13.22176179 -6.583003908 3.834356088 1.040634258 1.20928308 0.619033351 0.062722999 0.155356804 4.668623609 0.021770799 0.022152672 2.61E-07 6.583003908 0.168648822 NCPS(ph)PVLIDCPHPNCNKK ddPTM_A459_MK2206_30min_R2 6 NCPSPVLIDCPHPNCNKK 18 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 NCPS(1)PVLIDCPHPNCNKK;NCPS(1)PVLIDCPHPNCNKK;NCPS(1)PVLIDCPHPNCNKK;NCPS(1)PVLIDCPHPNCNKK;NCPS(1)PVLIDCPHPNCNKK;NCPS(1)PVLIDCPHPNCNKK 102.65 0.0011545 267228000 339957 436998 429842 440988 423683 330589 485101 369901 371211 450199 TRUE FALSE 365984.3693 415297.3148 444172.7177 404957.8697 407047.0766 343169.796 421406.656 418248.3308 403498.2618 435509.0435 0.840359976 0.953590565 1.019893213 0.929849508 0.934646668 0.787973984 0.967618612 0.96036658 0.926498009 1 18.73234315 -8.906149034 0.920606475 0.999274504 0.923242255 0.121077618 0.062238105 3.160397781 4.598677725 0.063602108 0.020883856 1.24E-09 8.906149034 -0.076032249 NCS(ph)ASTSQER ddPTM_A459_MK2206_30min_R2 2 NCSASTSQER 10 0 H7BZV4;A0A0C4DG62;Q66PJ3-4;Q66PJ3-3;F8WEP2 H7BZV4 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 NCS(0.902)AS(0.019)T(0.069)S(0.01)QER;NCS(0.956)AS(0.038)T(0.005)SQER 106.79 0.011689 277910000 37757 28915 33354 38358 39292 31597 38809 41567 40872 41274 TRUE FALSE 40647.70495 27479.12315 34466.00571 35224.0287 37749.19865 32799.44598 33713.33168 46999.94962 44426.97268 39927.23276 1.018044631 0.688230094 0.863220497 0.882205609 0.945449911 0.821480571 0.844369353 1.177140172 1.112698517 1 15.28508547 -7.754077428 24.99937158 1.10868952 0.861137998 0.5796584 0.089689702 103.4402921 351261.0734 0.041693053 0.0234508 1.76E-08 7.754077428 -0.247551522 NCS(ph)ASTSQGR ddPTM_A459_MK2206_30min_R2 2 NCSASTSQGR 10 0 Q66PJ3;F5GYV5;F8WCT1;Q66PJ3-2;A0A0C4DH18;A0A0A0MTG7;Q66PJ3-6;Q66PJ3-5 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 NCS(0.995)AS(0.004)T(0.002)SQGR;NCS(0.909)AS(0.004)T(0.086)SQGR 112.02 0.0084914 2720300 15407.5 5202.3 7253.1 10108 11661.5 7275.3 11808 39418 17652.3 16154.1 TRUE FALSE 16587.11005 4943.961347 7494.914734 9282.144066 11203.61092 7552.16664 10257.59542 44570.06794 19187.66515 15626.99304 1.061439652 0.316373171 0.479613366 0.593981455 0.71693965 0.483277021 0.65640238 2.852120547 1.227853951 1 13.93175258 -7.623240981 12.38785002 1.779382214 0.591760025 0.501969465 0.48978565 0.348912509 40.84144496 0.212312379 0.1225224 2.38E-08 7.623240981 -1.18762219 NCS(ph)SPEFSK ddPTM_A459_MK2206_30min_R1 1 NCSSPEFSK 9 0 Q5JX53;Q5JX54;F2Z2V0;A6PVH9;E7ENH5;Q5JX45;Q5JX52;Q5JX44;Q5JX60;Q5JX61;Q5JX59;Q5JX58;Q5JX56;Q5JX55;E7EV27;Q5JX57;Q99829;B0QZ18 Q5JX53 CPNE1 Copine-1 1 NCS(0.959)S(0.041)PEFSK 111.86 0.010031 10260000 3489.2 3290.5 3701 2943.9 2680.3 2721.9 3370 3214.2 3275.4 3025.2 TRUE FALSE 3192.425217 3076.287852 3449.786432 3170.639688 2573.537975 2876.011626 3145.193449 3186.098588 3615.889551 3399.984615 0.938952842 0.904794639 1.014647659 0.932545304 0.756926359 0.8458896 0.925061083 0.93709206 1.063501739 1 11.7313125 -8.08027026 3.293023273 1.030796979 0.901153419 0.378333182 0.064862844 0.298644545 5.968876125 0.055749312 0.019038776 8.31E-09 8.08027026 -0.12964356 NCSASTS(ph)QER ddPTM_A459_MK2206_30min_R1 2 NCSASTSQER 10 0 H7BZV4;A0A0C4DG62;Q66PJ3-4;Q66PJ3-3;F8WEP2 H7BZV4 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 NCSAS(0.015)T(0.06)S(0.925)QER;NCSAS(0.005)T(0.022)S(0.972)QER 126.12 0.0036917 2739100 8810.4 7388.9 5041.3 5019.2 3010.4 3568.4 6947.7 7703.9 480.86 3870.2 TRUE FALSE 8061.029215 6907.881267 4699.110602 5405.779654 2890.489393 3770.439724 6484.23161 7636.545615 530.8471178 4349.669595 1.853250929 1.58813931 1.080337368 1.242802364 0.664530795 0.866833593 1.490741186 1.755661079 0.12204309 1 12.0866901 -5.096543785 1.943920443 1.049084289 1.902681077 0.309879616 0.42157491 0.581720024 3.56501056 0.118005897 0.709157449 8.01E-06 5.096543785 0.853596788 NCSASTSQAS(ph)PSPCITER ddPTM_A459_MK2206_30min_R1 1 NCSASTSQASPSPCITER 18 0 F5H7X4;Q66PJ3-7 F5H7X4 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 NCSASTSQAS(1)PSPCITER 265.42 2.35E-43 8028800 825.87 916.66 1004 872.12 948.88 1025.1 1024.1 707.72 906.88 1024.5 TRUE FALSE 755.6254197 856.9852674 935.8512773 939.2908335 911.0841003 1083.140276 955.7841576 701.5324787 1001.153421 1151.422795 0.656253657 0.744283743 0.81277814 0.815765363 0.791268077 0.940697267 0.830089661 0.60927444 0.869492445 1 10.16920196 NCSASTSQAS(ph)PSPCITER ddPTM_A459_MK2206_30min_R2 3 NCSASTSQASPSPCITER 18 0 F5H7X4;Q66PJ3-7 F5H7X4 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 NCS(0.427)AS(0.008)T(0.001)S(0.001)QAS(0.557)PS(0.005)PCITER;NCSASTS(0.061)QAS(0.906)PS(0.033)PCITER;NCS(0.006)AS(0.022)T(0.007)S(0.001)QAS(0.964)PSPCITER 295.52 2.00E-81 28325500 51297 57504 50935 54194 54693 43899.3 61368 42547 42729 50488 TRUE FALSE 55224.33776 54648.43498 52633.14748 49766.17684 52545.47801 45569.91862 53310.30788 48108.03899 46445.49118 48840.58069 1.130706003 1.118914522 1.077651959 1.018951375 1.075856946 0.933033923 1.091516668 0.985001372 0.950961076 1 15.57579273 -4.918163099 0.453148562 0.987487865 1.238350168 0.55230261 0.044493873 3.393731479 0.594436519 0.031835095 0.453626352 1.21E-05 4.918163099 0.250862303 NCSASTSQASPS(ph)PCITER ddPTM_A459_MK2206_30min_R1 1 NCSASTSQASPSPCITER 18 0 F5H7X4;Q66PJ3-7 F5H7X4 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 NCSAS(0.004)T(0.012)S(0.259)QAS(0.255)PS(0.469)PCITER 124.77 0.00098592 0 1985.6 1869.6 2265 2202 1846.5 1442.8 1648.7 1646.1 1565.1 1986.1 TRUE FALSE 1816.714293 1747.8887 2111.258111 2371.598422 1772.949995 1524.490089 1538.718231 1631.708321 1727.797746 2232.153062 0.813884282 0.783050558 0.945839309 1.062471235 0.794277966 0.682968437 0.689342616 0.731001986 0.774049851 1 11.12422024 -6.506888127 24.68861775 0.751648859 0.90008596 0.217552621 0.10990715 805.4977513 1243645.382 0.035020912 0.038580959 3.11E-07 6.506888127 0.148437101 NCSETQYESK ddPTM_A459_MK2206_30min_R2 2 NCSETQYESK 10 0 P61981 P61981 YWHAG "14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed" 0 ; 144.17 0.022791 0 11439.9 13160.3 14670.8 13037.2 14510.2 12805 16264.7 13380.8 14775.3 15592.9 FALSE TRUE 12315.74754 12506.77864 15159.91715 11972.01906 13940.45664 13292.30325 14129.12535 15129.7165 16060.42889 15084.10495 0.816471881 0.829136278 1.005025966 0.793684418 0.924181891 0.881212594 0.936689674 1.003023816 1.064725348 1 13.88074147 -7.625132449 1.740312379 1.035359563 0.875431716 0.566664584 0.058102478 0.274087486 1.618218821 0.039238771 0.01763302 2.37E-08 7.625132449 -0.159927847 NCSS(ph)PEFSK ddPTM_A459_MK2206_30min_R1 3 NCSSPEFSK 9 0 Q5JX53;Q5JX54;F2Z2V0;A6PVH9;E7ENH5;Q5JX45;Q5JX52;Q5JX44;Q5JX60;Q5JX61;Q5JX59;Q5JX58;Q5JX56;Q5JX55;E7EV27;Q5JX57;Q99829;B0QZ18 Q5JX53 CPNE1 Copine-1 1 NCS(0.113)S(0.887)PEFSK;NCS(0.238)S(0.762)PEFSK;NCS(0.11)S(0.888)PEFS(0.002)K 151.55 0.0012018 23136800 11025 11775 11887.6 10546.6 10327.8 9547.2 11412.7 10880.8 10048.1 10715.5 TRUE FALSE 10087.26586 11008.44536 11080.70283 11358.90096 9916.421857 10087.75421 10651.37961 10785.67031 11092.63595 12043.01704 0.837602888 0.914093647 0.920093594 0.943193962 0.823416742 0.837643439 0.884444452 0.895595371 0.921084469 1 13.55590924 -8.679053791 1.559396952 0.999707315 0.882021178 0.489763309 0.036957195 0.590250981 2.874366913 0.038327316 0.011104138 2.09E-09 8.679053791 -0.117686136 NCSS(ph)PEFSK ddPTM_A459_MK2206_30min_R2 1 NCSSPEFSK 9 0 Q5JX53;Q5JX54;F2Z2V0;A6PVH9;E7ENH5;Q5JX45;Q5JX52;Q5JX44;Q5JX60;Q5JX61;Q5JX59;Q5JX58;Q5JX56;Q5JX55;E7EV27;Q5JX57;Q99829;B0QZ18 Q5JX53 CPNE1 Copine-1 1 NCS(0.025)S(0.975)PEFSK 168.83 0.00074359 13278000 66888 73012 80498 73638 73178 52676 76030 65376 61390 70320 TRUE FALSE 72008.99671 69386.33025 83181.76314 67621.53984 70304.66403 54680.62209 66047.16967 73920.86767 66729.59123 68025.46416 1.058559432 1.020005245 1.222803316 0.99406216 1.033505098 0.803825784 0.970918324 1.086664657 0.980950179 1 16.05378728 -5.96786009 24.86838587 0.978025766 1.095081332 0.301795694 0.083096995 242.3075597 187484.8369 0.024407988 0.036202612 1.08E-06 5.96786009 0.117055567 NCVAIAADRR ddPTM_A459_MK2206_30min_R1 2 NCVAIAADRR 10 1 A0A087WXQ8;A0A087WY10;A0A087WUL2;P49720 A0A087WXQ8 PSMB3 Proteasome subunit beta type-3 0 ; 149.33 0.0010179 5376400 4010.6 4410.6 4571.4 4081.3 4230.8 3685.5 4808.8 4259 4128.6 3928.4 FALSE TRUE 3669.47741 4123.469138 4261.106105 4395.642433 4062.278277 3894.169825 4488.013726 4221.764012 4557.782744 4415.07985 0.831123679 0.933951203 0.96512549 0.995597494 0.920091689 0.882015718 1.016519266 0.956214645 1.032321702 1 12.10822381 -4.737895718 2.319905686 0.966840467 0.788007694 0.492433713 0.042654137 0.62863553 3.681996657 0.0114903 0.241541634 1.83E-05 4.737895718 -0.178832773 NCVAIAADRR ddPTM_A459_MK2206_30min_R2 4 NCVAIAADRR 10 1 A0A087WXQ8;A0A087WY10;A0A087WUL2;P49720 A0A087WXQ8 PSMB3 Proteasome subunit beta type-3 0 ;;; 141.91 0.0017007 12335400 48297 62994 61455.3 62720.2 59892 59299 65619 52240.8 58270.9 57495.9 FALSE TRUE 51994.65545 59865.80956 63504.18903 57595.75903 57540.33915 61555.665 57003.14648 59068.85193 63339.19755 55619.81349 0.934822542 1.076339632 1.1417548 1.035525929 1.034529523 1.106721888 1.024871227 1.062010967 1.138788384 1 15.76331129 -4.760034322 24.98573657 1.070845051 0.934822376 0.437934004 0.045539808 32.8970972 584789.361 0.011008155 0.067183535 1.74E-05 4.760034322 -0.136022675 NCVGSSLPEASPPAPEPS(ph)SPNAAVPEAIPTPR ddPTM_A459_MK2206_30min_R1 1 NCVGSSLPEASPPAPEPSSPNAAVPEAIPTPR 32 0 P57086 P57086 SCAND1 SCAN domain-containing protein 1 1 NCVGS(0.001)S(0.001)LPEAS(0.027)PPAPEPS(0.507)S(0.439)PNAAVPEAIPT(0.024)PR 47.91 0.040912 0 229.69 142.32 205 273.3 145.43 143.57 185.8 242.7 176.45 276.44 TRUE FALSE 210.1536593 133.0549421 191.0851712 294.3496134 139.6372151 151.6988093 173.405621 240.5780995 194.7926089 310.6874742 0.676414973 0.428259757 0.615039829 0.947413841 0.449445912 0.488268186 0.558135218 0.774341161 0.626972843 1 8.279320268 -9.165603704 0.819221894 1.003339881 0.600644796 0.379001848 0.14794064 2.656205714 2.471158925 0.1737684 0.051580193 6.83E-10 9.165603704 -0.402695085 NCWQNYLDFHR ddPTM_A459_MK2206_30min_R1 2 NCWQNYLDFHR 11 0 P14854;A0A494C160 P14854 COX6B1 Cytochrome c oxidase subunit 6B1 0 ; 139.32 0.001655 23058000 5851.6 7298.1 6753 7325 6181.2 5866.2 6631.9 5981.2 5823.6 6006.1 FALSE TRUE 5353.890692 6822.992364 6294.625175 7889.172769 5934.989715 6198.339175 6189.498052 5928.906999 6428.98406 6750.181012 0.793147722 1.010786578 0.932512056 1.168734995 0.879234158 0.918247846 0.916938085 0.878333039 0.952416542 1 12.72071047 NDAPTPGTSTT(ph)PGLR ddPTM_A459_MK2206_30min_R2 1 NDAPTPGTSTTPGLR 15 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 NDAPTPGT(0.011)S(0.036)T(0.217)T(0.735)PGLR 105 0.011317 5125500 23185 25896 21594 23595 25857 22992 25054 17459 24393 22727 TRUE FALSE 24960.06143 24610.0423 22313.93318 21667.21302 24841.72426 23866.97667 21764.3797 19740.95125 26514.65905 21985.41985 1.135300649 1.119380138 1.014942327 0.985526461 1.12991812 1.085582028 0.989946058 0.897911042 1.206011039 1 14.42425946 -7.25232679 24.03465713 1.014959622 1.075532557 0.088300732 0.08448454 944.224316 2490418.718 0.032631464 0.024888051 5.59E-08 7.25232679 0.060572936 NDCRS(ph)PTHLTVSSTNTLR ddPTM_A459_MK2206_30min_R2 1 NDCRSPTHLTVSSTNTLR 18 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 NDCRS(0.816)PT(0.183)HLT(0.001)VSSTNTLR 53.536 0.032235 4350400 12220 20829 13972 19434 20042 23536 26929 18021 16637 10627 TRUE FALSE 13155.5726 19794.66215 14437.81951 17846.18003 19255.05038 24431.67897 23393.18995 20376.40658 18084.05619 10280.24186 1.279694853 1.925505491 1.404424108 1.735968888 1.873015308 2.376566554 2.275548598 1.982094084 1.759108048 1 13.32758659 -6.169182358 2.994331432 1.974895115 1.576560576 0.102218052 0.38729161 0.467002123 8.112397677 0.117533236 0.156289758 6.77E-07 6.169182358 -0.398334539 NDELLSDLTRT(ph)PPPPSSTFPK ddPTM_A459_MK2206_30min_R1 1 NDELLSDLTRTPPPPSSTFPK 21 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 NDELLS(0.001)DLT(0.093)RT(0.906)PPPPSSTFPK 92.38 0.00082202 12354000 1477.1 1243.9 1242.7 1873.2 1751.9 1326.3 1105.9 1542.7 892.64 453.61 TRUE FALSE 1351.464888 1162.921884 1158.348986 2017.474189 1682.118113 1401.39396 1032.127429 1529.212337 985.4331223 509.8066314 2.650936267 2.281103878 2.272134011 3.957332181 3.299521838 2.748873541 2.024546888 2.99959287 1.932954696 1 8.993806329 -8.719307375 0.938267892 0.98882152 2.830382118 0.517969289 0.537432155 0.743411678 1.324639307 0.560068892 0.187183353 1.91E-09 8.719307375 1.841560598 NDFTEEEEAQVR ddPTM_A459_MK2206_30min_R2 1 NDFTEEEEAQVR 12 0 E5RJR5;P63208 E5RJR5 SKP1 S-phase kinase-associated protein 1 0 136.27 0.019677 11471000 11819 17085 18747 20080 26098 21383 29209 14086 24486 21609 FALSE TRUE 12723.87173 16236.58374 19372.01562 18439.39977 25073.26139 22196.74505 25373.82321 15927.08856 26615.74802 20903.9001 0.608684105 0.776725093 0.926717767 0.882103324 1.199453751 1.061847069 1.213832017 0.761919474 1.27324317 1 14.35148451 -5.104048829 0.933475393 1.073279938 0.499453077 0.537712341 0.14167664 1.057907231 1.022430962 0.048958623 0.555064007 7.87E-06 5.104048829 -0.573826861 NDKS(ph)EEEQSSSSVK ddPTM_A459_MK2206_30min_R1 6 NDKSEEEQSSSSVK 14 1 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(0.998)EEEQS(0.001)SSSVK;NDKS(1)EEEQSSSSVK;NDKS(0.994)EEEQS(0.002)S(0.003)S(0.001)SVK;NDKS(0.999)EEEQSSSSVK;NDKS(0.997)EEEQS(0.001)SS(0.001)S(0.001)VK;NDKS(1)EEEQSSSSVK 283.22 3.60E-54 2510329000 29173.8 34244.6 35308.7 30009.9 18472.1 16419.51 23908.9 25258.4 15830.93 28281.1 TRUE FALSE 26692.41511 32015.27032 32912.04382 32321.2677 17736.31714 17349.16847 22313.98091 25037.56847 17476.61183 31784.77618 0.839786159 1.007251715 1.035465647 1.016878883 0.558012963 0.545832645 0.702033602 0.787722032 0.549842218 1 14.95604831 -6.252181936 24.89068985 0.673295932 0.981490345 0.502138401 0.137964501 483.2824335 1299411.241 0.039852687 0.050716641 5.60E-07 6.252181936 0.308194412 NDKS(ph)EEEQSSSSVK ddPTM_A459_MK2206_30min_R2 8 NDKSEEEQSSSSVK 14 1 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(0.899)EEEQS(0.05)S(0.035)S(0.013)S(0.002)VK;NDKS(0.824)EEEQS(0.169)S(0.004)S(0.002)S(0.001)VK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(0.999)EEEQS(0.001)SSSVK;NDKS(0.914)EEEQS(0.085)S(0.001)SSVK 176.21 0.0003277 1364937600 610286 533891 627827 460780.9 497683.9 319092.9 561115 419482.2 349036.7 629259 TRUE FALSE 657009.9654 507378.7493 648758.4388 423133.6265 478142.3294 331236.2039 487439.9265 474309.9638 379395.2813 608726.3304 1.079319117 0.833508794 1.065763721 0.695113067 0.785479953 0.544146339 0.800753807 0.779184241 0.623260835 1 19.21543425 -5.768798124 24.99866131 0.733057438 0.976928378 0.42540812 0.129940073 146.5998011 498021.0098 0.034239222 0.051957055 1.70E-06 5.768798124 0.24387094 NDKS(ph)EEEQSSSSVKK ddPTM_A459_MK2206_30min_R1 4 NDKSEEEQSSSSVKK 15 2 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(1)EEEQSSSSVKK;NDKS(1)EEEQSSSSVKK;NDKS(1)EEEQSSSSVKK;NDKS(1)EEEQSSSSVKK 131.37 0.00080962 53585900 14016.9 17439.7 15516.3 14747.7 8704.17 7403.58 9842.22 13455.7 4532.56 9695.69 TRUE FALSE 12824.68905 16304.37236 14463.09679 15883.57041 8357.464478 7822.764302 9185.663462 13338.05823 5003.735832 10896.86528 1.176915445 1.496244282 1.327271323 1.457627493 0.76696043 0.717891256 0.842963846 1.224027084 0.459190391 1 13.41162555 -6.262253583 24.99678393 0.840899049 1.371263673 0.626209048 0.200297098 47.51418695 1458726.624 0.05875079 0.070587565 5.47E-07 6.262253583 0.530364624 NDKS(ph)EEEQSSSSVKK ddPTM_A459_MK2206_30min_R2 3 NDKSEEEQSSSSVKK 15 2 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(1)EEEQSSSSVKK;NDKS(1)EEEQSSSSVKK;NDKS(1)EEEQSSSSVKK 121.77 0.0018494 73074000 137997 169985 170197 123952 163393 94568 154830 105546 116464 165985 TRUE FALSE 148562.1564 161543.7921 175871.283 113824.7251 156977.3698 98166.85151 134500.635 119341.2246 126593.8282 160568.923 0.925223596 1.006071343 1.095300882 0.708883904 0.977632327 0.611368935 0.837650477 0.743239864 0.788408029 1 17.29283317 -6.71764617 24.99999557 0.782680035 0.941644142 0.242553539 0.128331242 184.4305527 105284.2745 0.041417837 0.041417613 1.92E-07 6.71764617 0.158964108 NDKSEEEQS(ph)SSSVK ddPTM_A459_MK2206_30min_R2 1 NDKSEEEQSSSSVK 14 1 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(0.001)EEEQS(0.721)S(0.255)S(0.022)S(0.002)VK 70.167 0.032119 11811000 19200 17865 20693 13618 15954 9969 24516 17757 12950 22778 TRUE FALSE 20669.96676 16977.85008 21382.89429 12505.36584 15327.5658 10348.37728 21297.01975 20077.90087 14076.36759 22034.75573 0.938061988 0.770503213 0.970416671 0.567529134 0.69560861 0.469638847 0.966519439 0.911192351 0.63882567 1 14.42749328 -9.683682841 12.90000124 0.999993685 0.768712688 0.145089829 0.167609571 0 0 0.165528181 0.040146481 2.07E-10 9.683682841 -0.231280997 NDKSEEEQSS(ph)SSVK ddPTM_A459_MK2206_30min_R2 1 NDKSEEEQSSSSVK 14 1 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.11)S(0.887)S(0.004)SVK 142.32 0.0025969 2263300 14399 11548 14239 10508 11508 6133.4 15335 8474.1 8671 13830 TRUE FALSE 15501.39851 10974.54311 14713.72115 9649.462787 11056.1381 6366.810835 13321.49608 9581.693966 9425.187906 13378.72823 1.158660094 0.820297933 1.09978474 0.721254115 0.826396792 0.475890587 0.995722153 0.716188699 0.704490572 1 13.70765336 -5.768951636 25 0.763917769 1.005652632 0.320833716 0.164496137 191.7385215 638087.4111 0.043733969 0.066318537 1.70E-06 5.768951636 0.241734863 NDKSEEEQSSS(ph)SVK ddPTM_A459_MK2206_30min_R1 2 NDKSEEEQSSSSVK 14 1 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.016)S(0.003)S(0.668)S(0.314)VK;NDKSEEEQSS(0.003)S(0.682)S(0.315)VK 144.25 0.00029221 14448700 6309.2 7666 6143.2 4674.9 2321.89 2372.3 5488 5780.2 1185.78 7892.1 TRUE FALSE 5772.569409 7166.942007 5726.2167 5034.961608 2229.404205 2506.617576 5121.905533 5729.664321 1309.046074 8869.83293 0.65080926 0.808013191 0.645583377 0.567650107 0.251346809 0.282600315 0.577452312 0.645972068 0.147584073 1 13.11469122 -10.27424708 8.746714949 1.000003938 0.514989259 0.349600238 0.200921564 0 0 0.20807248 0.050464989 5.32E-11 10.27424708 -0.485014679 NDKSEEEQSSS(ph)SVK ddPTM_A459_MK2206_30min_R2 4 NDKSEEEQSSSSVK 14 1 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.015)S(0.005)S(0.836)S(0.144)VK;NDKSEEEQSSS(0.878)S(0.122)VK;NDKSEEEQS(0.038)S(0.038)S(0.859)S(0.064)VK;NDKSEEEQS(0.289)S(0.242)S(0.461)S(0.009)VK 144.15 0.00029264 79355300 182264 109565 135164 103758 99477 62321.8 133538 104523 79203 163672 TRUE FALSE 196218.272 104124.1614 139670.3003 95280.63949 95571.03315 64693.49977 116004.3002 118184.515 86091.93377 158331.396 1.23928846 0.657634329 0.882139006 0.601779823 0.603613911 0.408595524 0.732667703 0.746437649 0.543745182 1 17.27258783 -2.63680993 1.346900503 0.65867426 199.9826491 0.492206604 0.164051563 400.9343036 2.773762146 0.045496017 244848.6463 0.002307757 2.63680993 199.3239748 NDKSEEEQSSS(ph)SVKKDETNVK ddPTM_A459_MK2206_30min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.066)S(0.296)S(0.34)S(0.296)VKKDET(0.002)NVK 56.681 0.020712 17292000 2649.1 3862.7 3596.6 3532.2 1641.6 1309.9 1930.5 2640.7 3020.3 2670.9 TRUE FALSE 2423.780134 3611.237528 3352.472813 3804.250656 1576.211596 1384.065406 1801.719867 2617.612638 3334.270993 3001.791256 0.807444598 1.203027532 1.116824098 1.26732685 0.525090341 0.461079831 0.60021491 0.872016878 1.110760446 1 11.55160794 -6.257058475 24.97274889 0.732039941 1.107408634 0.351420924 0.222088874 411.2188832 2344095.48 0.070686789 0.088071291 5.53E-07 6.257058475 0.375368693 NDKSEEEQSSSS(ph)VK ddPTM_A459_MK2206_30min_R1 1 NDKSEEEQSSSSVK 14 1 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQSSS(0.024)S(0.976)VK 195.89 0.00058465 2988500 1292.8 1184.8 1068.5 927.79 442.52 421.39 1004.2 1124.1 157.48 1401.4 TRUE FALSE 1182.840571 1107.669305 995.973197 999.2485466 424.8934913 445.2487376 937.2116503 1114.272112 173.8506095 1575.016012 0.751002252 0.703274948 0.632357506 0.634437072 0.269770903 0.282694737 0.595048967 0.707467165 0.110380217 1 10.62115078 -10.0889734 11.04480247 0.99999818 0.526010371 0.319198424 0.209860102 0 0 0.209990886 0.050930271 8.15E-11 10.0889734 -0.47398781 NDKSEEEQSSSS(ph)VK ddPTM_A459_MK2206_30min_R2 2 NDKSEEEQSSSSVK 14 1 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQSSS(0.002)S(0.998)VK;NDKSEEEQSSS(0.111)S(0.889)VK 147.49 0.00026262 23283000 79330 45645 58720 37367 39193 22455 54388 39079 30750 62108 TRUE FALSE 85403.56579 43378.33567 60677.69549 34313.99657 37654.08589 23309.54076 47246.79027 44186.75948 33424.57942 60081.42105 1.421463812 0.721992505 1.00992444 0.571124916 0.626717631 0.38796587 0.786379374 0.735447976 0.556321386 1 15.87463132 -2.150814623 1.026725044 0.665618081 199.999762 0.561315341 0.186037539 317.0761124 1.649420535 0.05624057 147185.1678 0.007066191 2.150814623 199.3341439 NDKSEEEQSSSS(ph)VKK ddPTM_A459_MK2206_30min_R2 1 NDKSEEEQSSSSVKK 15 2 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.002)S(0.038)S(0.268)S(0.692)VKK 83.633 0.026128 4629500 14097 7658.7 10163 6892.1 5119.5 2563.1 7417 6543.2 3496.9 8153.1 TRUE FALSE 15176.27716 7278.380095 10501.82935 6328.993383 4918.482707 2660.640567 6443.138991 7398.418706 3801.054041 7887.065015 1.924198308 0.922824914 1.331525647 0.80245229 0.623613815 0.337342289 0.816924798 0.938044595 0.481935173 1 12.94527282 -1.522878745 0.683559009 0.699568844 129.956333 0.654227376 0.251419709 162.41876 0.920559254 0.101779342 31990.76319 0.03 1.522878745 129.2567642 NDKSEEEQSSSSVK ddPTM_A459_MK2206_30min_R2 4 NDKSEEEQSSSSVK 14 1 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 ;;; 142.95 0.0015272 27307600 122619 146118 122634 121763 141607 94433 116994 99739 100301 117127 FALSE TRUE 132006.8049 138861.9926 126722.5564 111814.5734 136046.7977 98026.71399 101632.5473 112775.2298 109024.9997 113305.1556 1.16505559 1.225557583 1.118418272 0.986844533 1.20071145 0.865156696 0.896980784 0.995323021 0.962224526 1 16.78985398 -5.977178466 0.83230147 0.949930431 1.209035534 0.536015925 0.08216904 0.573192205 0.788843323 0.040299681 0.0989131 1.05E-06 5.977178466 0.259105103 NDKSEEEQSSSSVKKDET(ph)NVK ddPTM_A459_MK2206_30min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.014)S(0.077)S(0.06)S(0.014)VKKDET(0.834)NVK 75.55 0.0014927 16603000 3779.4 5500.9 5686.9 4775.9 2975.7 1926 2970.6 4141.8 4501.2 3547.5 TRUE FALSE 3457.942184 5142.79041 5300.889073 5143.740646 2857.171568 2035.048456 2772.436694 4105.588679 4969.115848 3986.991082 0.867306225 1.289892629 1.329546258 1.290130963 0.716623516 0.510422124 0.695370679 1.029746141 1.246332321 1 11.96108466 -6.257124344 24.94407095 0.841551162 1.21071909 0.329242678 0.22707274 425.9087079 2462062.188 0.074316832 0.092591658 5.53E-07 6.257124344 0.369167928 NDLQDTEIS(ph)PR ddPTM_A459_MK2206_30min_R1 2 NDLQDTEISPR 11 0 Q9NS91 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 NDLQDTEIS(1)PR;NDLQDTEIS(1)PR 195.71 2.07E-05 57346000 5817.5 5586.7 5820 4107.8 3719.3 4855 6314.9 4964.6 5366.7 6260.2 TRUE FALSE 5322.691076 5223.004815 5424.954615 4424.183468 3571.152405 5129.885904 5893.644543 4921.195026 5924.58767 7035.760838 0.756519614 0.742351102 0.771054438 0.628813794 0.507571603 0.729116015 0.837669824 0.699454563 0.842067803 1 12.78049073 -8.649477625 0.828466121 1.000456897 0.693749103 0.547467742 0.083922233 0.671302797 0.987602701 0.089668745 0.031831691 2.24E-09 8.649477625 -0.306707794 NDLQDTEIS(ph)PR ddPTM_A459_MK2206_30min_R2 4 NDLQDTEISPR 11 0 Q9NS91 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 NDLQDTEIS(1)PR;NDLQDT(0.001)EIS(0.999)PR;NDLQDTEIS(1)PR;NDLQDTEIS(1)PR 173.06 0.00021181 223255900 380736 307815 347708 315847 338044 329283 409880 302290 291427 390488 TRUE FALSE 409885.4409 292529.3547 359300.4112 290041.2898 324770.694 341814.0953 356062.2636 341800.3409 316774.7937 377746.4085 1.085080974 0.774406713 0.951168305 0.767820112 0.859758522 0.904877155 0.942596026 0.904840743 0.838591146 1 18.52705851 -6.935768023 7.096800525 0.914992613 0.878412181 0.022383757 0.092375177 0.939658549 85.23154425 0.031301457 0.027548308 1.16E-07 6.935768023 -0.036580432 NDLS(ph)PTTVMSEGAR ddPTM_A459_MK2206_30min_R1 1 NDLSPTTVMSEGAR 14 0 P30043;M0R192;A0A2R8Y7Y9;M0QZL1 P30043 BLVRB Flavin reductase (NADPH) 1 NDLS(0.619)PT(0.191)T(0.191)VMSEGAR 120.21 0.0021004 5991400 1251.6 1290.3 1241.8 1289.8 1154.7 965.05 1130 1182.2 1029.4 1334 TRUE FALSE 1145.144848 1206.301235 1157.510076 1389.140619 1108.705854 1019.690297 1054.619762 1171.86415 1136.409814 1499.265991 0.763803657 0.804594543 0.772051179 0.926547142 0.739499102 0.680126344 0.703424054 0.781625247 0.757977451 1 10.55004065 -10.8807064 4.027599411 1.0005948 0.770494523 0.546818415 0.062824011 11949948.84 32283814.12 37524.26823 0.016469087 1.32E-11 10.8807064 -0.230100277 NDLSPTTVMS(ph)EGAR ddPTM_A459_MK2206_30min_R2 1 NDLSPTTVMSEGAR 14 0 P30043;M0R192;A0A2R8Y7Y9;M0QZL1 P30043 BLVRB Flavin reductase (NADPH) 1 NDLS(0.121)PT(0.225)T(0.225)VMS(0.429)EGAR 95.755 0.012276 4380500 24590 25130 28567 29037 26582 27678 30092 17990 23461 26849 TRUE FALSE 26472.62931 23882.08074 29519.40952 26664.58422 25538.25712 28731.30568 26140.88425 20341.35477 25501.59537 25972.91933 1.019239654 0.919499285 1.13654569 1.026630233 0.983264792 1.1062024 1.006466925 0.783175526 0.981853255 1 14.66472056 -7.546685214 24.99432277 0.908472801 1.031364831 0.280999531 0.078180529 259.5912649 272540.5726 0.035318332 0.020392257 2.84E-08 7.546685214 0.12289203 NDQDTWDYTNPNLSGQGDPGSNPNKR ddPTM_A459_MK2206_30min_R2 2 NDQDTWDYTNPNLSGQGDPGSNPNKR 26 1 P14866;M0QXS5;A0A3B3ITJ4;P14866-2 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 0 ; 149.44 8.84E-11 16161700 59302 70832 56188 65276 61568 54461 63749 59165 59933 69472 FALSE TRUE 63842.20672 67314.58588 58061.27988 59942.74199 59150.53097 56533.55152 55378.67972 66898.06864 65145.86401 67205.13433 0.949960258 1.001628619 0.863941133 0.891936942 0.880148988 0.841208817 0.824024537 0.995430919 0.969358438 1 16.03628384 -7.788772215 24.99785745 0.986796107 0.89374662 0.440625354 0.0490402 243.4632938 222661.3792 0.029858005 0.014348729 1.63E-08 7.788772215 -0.093049487 NDQEPPPEALDFS(ph)DDEKEK ddPTM_A459_MK2206_30min_R1 2 NDQEPPPEALDFSDDEKEK 19 1 Q96HR8-2;Q96HR8 Q96HR8-2 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 1 NDQEPPPEALDFS(1)DDEKEK;NDQEPPPEALDFS(1)DDEKEK 118.52 0.00024795 96974000 13732.4 19700.7 19188.5 15104.8 7398.2 6931 11194.6 11040.4 18542.8 17399.9 TRUE FALSE 12564.38727 18418.18085 17886.03808 16268.17431 7103.514028 7323.42723 10447.82866 10943.87495 20470.39042 19555.53097 0.642497884 0.941839977 0.914628097 0.831896323 0.363248333 0.374493909 0.534264637 0.559630672 1.046782644 1 14.25528909 -6.046844223 24.11190778 0.604490518 0.848771963 0.120507814 0.22926798 448.2112716 230704.6969 0.068485433 0.088418113 8.98E-07 6.046844223 0.244281445 NDQEPPPEALDFS(ph)DDEKEK ddPTM_A459_MK2206_30min_R2 6 NDQEPPPEALDFSDDEKEK 19 1 Q96HR8-2;Q96HR8 Q96HR8-2 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 1 NDQEPPPEALDFS(1)DDEKEK;NDQEPPPEALDFS(1)DDEKEK;NDQEPPPEALDFS(1)DDEKEK;NDQEPPPEALDFS(1)DDEKEK;NDQEPPPEALDFS(1)DDEKEK;NDQEPPPEALDFS(1)DDEKEK 110.26 0.00036469 95962400 607395 489194 577524 359187 424986 222323.1 560226 430692 293035 652105 TRUE FALSE 653897.6282 464901.3373 596778.3619 329840.2731 408298.9143 230783.7614 486667.6532 486984.9232 318522.6546 630826.8673 1.036572255 0.736971365 0.946025594 0.522869729 0.647244015 0.365843266 0.771475786 0.771978729 0.504928802 1 19.26688458 -5.753199698 24.99116453 0.637898445 0.889567946 0.288971091 0.178895331 226.9366685 688297.2572 0.046926491 0.079556921 1.77E-06 5.753199698 0.251669501 NDQWHWDNIR ddPTM_A459_MK2206_30min_R1 1 NDQWHWDNIR 10 0 E9PF63;O75116;D6REE7;C9JFJ0 E9PF63 ROCK2 Rho-associated protein kinase 2 0 114.86 0.0095914 2491900 3646.2 3344.6 3777.5 3334.1 3179.1 2909.4 3196.1 2969 2343 2502.7 FALSE TRUE 3336.071543 3126.865932 3521.093825 3590.89296 3052.469715 3074.127714 2982.894001 2943.042346 2586.563235 2812.75337 1.186051923 1.111674406 1.251831697 1.276646932 1.0852248 1.092924729 1.060488997 1.046320796 0.919584085 1 11.45776734 -7.122657147 0.948854605 0.9786289 1.198521696 0.709823553 0.05623072 0.336049142 0.608461248 0.042356056 0.027382167 7.54E-08 7.122657147 0.219892796 NDREYDS(ph)GDTDEIIAMK ddPTM_A459_MK2206_30min_R1 2 NDREYDSGDTDEIIAMK 17 1 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 1 NDREYDS(0.973)GDT(0.027)DEIIAMK;NDREY(0.001)DS(0.998)GDT(0.001)DEIIAMK 133.98 0.0003234 10754900 11797.1 9996.7 11740.9 9479.4 10049.5 10250.8 12688 9830.7 11456.4 11945 TRUE FALSE 10793.6947 9345.913013 10943.96042 10209.50503 9649.207135 10831.19144 11841.60667 9744.751226 12647.33378 13424.83678 0.80400938 0.696165858 0.815202494 0.760493792 0.718757873 0.806802467 0.882067087 0.725874838 0.942084733 1 13.71261693 -8.547430059 0.679269637 1.006098565 0.761717885 0.61883691 0.058361466 0.531691274 0.559603345 0.056471174 0.022601387 2.84E-09 8.547430059 -0.24438068 NDRGDQVPNR ddPTM_A459_MK2206_30min_R1 1 NDRGDQVPNR 10 1 F5H1H2;F5H2E6;A0A0C4DGG8;Q8IX12-2;Q8IX12;F5H3E1 F5H1H2 CCAR1 Cell division cycle and apoptosis regulator protein 1 0 90.149 0.043167 0 565.39 479.4 436.55 408.48 321.92 479.39 478.35 451.27 136.19 413.98 FALSE TRUE 517.3006115 448.1909729 406.9182023 439.9412004 309.0972447 506.5326475 446.4401443 447.324594 150.3474379 465.2669678 1.111836101 0.963298501 0.874590784 0.945567235 0.664343842 1.088692477 0.959535439 0.96143639 0.3231423 1 8.861914955 -1.522878746 0.586010899 0.841423418 15.9734853 0.140628056 0.205554456 346.504889 2.818132955 0.094375222 6684.633301 0.03 1.522878746 15.13206188 NDS(ph)GEENVPLDLTR ddPTM_A459_MK2206_30min_R1 2 NDSGEENVPLDLTR 14 0 Q6R327-3;Q6R327;Q6R327-4 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 NDS(1)GEENVPLDLTR;NDS(1)GEENVPLDLTR 164.58 0.00025953 49648000 3850.7 4947.3 4045.5 3454.7 2950.8 3165.2 4152.1 3848 4830.3 4934.3 TRUE FALSE 3523.177744 4625.229871 3770.902731 3720.781593 2833.263388 3344.410889 3875.120985 3814.357342 5332.42697 5545.598336 0.635310661 0.834036219 0.679981222 0.670943218 0.510903101 0.603074851 0.69877419 0.687817096 0.961560259 1 12.43712741 -8.273522821 3.451426287 1.001181135 0.66266393 0.733484422 0.076422004 0.130936399 3.133442759 0.075686885 0.02169058 5.33E-09 8.273522821 -0.338517205 NDS(ph)GEENVPLDLTR ddPTM_A459_MK2206_30min_R2 2 NDSGEENVPLDLTR 14 0 Q6R327-3;Q6R327;Q6R327-4 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 NDS(0.959)GEENVPLDLT(0.041)R;NDS(1)GEENVPLDLTR 178.52 7.16E-05 27654000 50652 54929 51430 51923 43681 43462 63196 45235 43519 57343 TRUE FALSE 54529.95606 52201.30573 53144.65053 47680.72481 41965.86446 45115.97687 54898.28929 51147.36981 47304.20396 55471.90261 0.983019394 0.941040478 0.958046291 0.859547313 0.7565247 0.813312231 0.98965939 0.922041023 0.852759717 1 15.75946959 -5.752859167 23.85911951 0.877627935 0.958735954 0.18932637 0.070816401 181.3576876 504293.5781 0.020618347 0.03494127 1.77E-06 5.752859167 0.081108018 NDS(ph)GEENVPLDLTREPSDNLR ddPTM_A459_MK2206_30min_R1 1 NDSGEENVPLDLTREPSDNLR 21 1 Q6R327-3;Q6R327;Q6R327-4 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 NDS(0.923)GEENVPLDLT(0.068)REPS(0.009)DNLR 51.684 0.028468 2737000 0 173.17 165.42 177.73 152.92 147.39 176.13 204.01 194.34 58.177 TRUE FALSE 0 161.8966015 154.1917513 191.4187954 146.8288726 155.7350944 164.3806891 202.2263621 214.5423385 65.38440597 0 2.476073601 2.358234337 2.927590953 2.245625244 2.381838484 2.514065649 3.092883679 3.281246274 1 6.030874692 -4.764858825 7.639272941 2.544921533 1.07E-12 0.607941358 0.594115043 0.058355107 26.22060114 0.139919571 0.780865828 1.72E-05 4.764858825 -2.544921533 NDS(ph)LPVLR ddPTM_A459_MK2206_30min_R2 1 NDSLPVLR 8 0 Q9GZY8-5 Q9GZY8-5 MFF Mitochondrial fission factor 1 NDS(1)LPVLR 84.821 0.036139 2300000 22851 18173 21468 18774 17970 16676 28126 15906 18986 15855 TRUE FALSE 24600.49013 17270.55525 22183.73241 17240.10414 17264.40751 17310.61687 24433.02241 17984.96881 20637.36796 15337.65265 1.603927973 1.126023365 1.446357726 1.124037983 1.125622538 1.128635344 1.593009242 1.172602433 1.345536272 1 13.90479008 -11.81626914 1.854512388 3.35E-05 1.28569264 0.186617256 0.18434131 3193906.163 437194.0761 13343261.8 0.046287418 1.53E-12 11.81626914 1.285659102 NDS(ph)PTQIPVSSDVCR ddPTM_A459_MK2206_30min_R1 2 NDSPTQIPVSSDVCR 15 0 Q8TC07-2;Q8TC07-3;Q8TC07 Q8TC07-2 TBC1D15 TBC1 domain family member 15 1 NDS(0.92)PT(0.08)QIPVSSDVCR;NDS(0.603)PT(0.397)QIPVSSDVCR 222.96 1.15E-09 45588000 7402.6 8461.7 8168.4 6738.4 6943.9 5398.4 7115.5 7034 7372.7 6181.3 TRUE FALSE 6772.969997 7910.841792 7613.951766 7257.392736 6667.309759 5704.052743 6640.837978 6972.50248 8139.118548 6947.08611 0.974936814 1.138728046 1.095992139 1.044667163 0.959727525 0.82107126 0.955917038 1.003658565 1.171587399 1 12.76219226 -6.100050609 4.196811867 0.976292468 1.076067182 0.155067488 0.088813417 0.400760245 12.21131479 0.028437621 0.037966891 7.94E-07 6.100050609 0.099774714 NDS(ph)WGSFDLR ddPTM_A459_MK2206_30min_R1 4 NDSWGSFDLR 10 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 NDS(0.979)WGS(0.021)FDLR;NDS(0.999)WGS(0.001)FDLR;NDS(0.999)WGS(0.001)FDLR;NDS(0.998)WGS(0.002)FDLR 177.93 8.10E-05 136325300 11887.9 12300.9 13016.6 11984.4 10459.6 9887 11130.8 11229.9 10716.6 9328 TRUE FALSE 10876.77168 11500.10917 12133.06946 12907.44056 10042.97198 10446.7934 10388.28464 11131.71817 11830.62892 10483.62306 1.037501216 1.09695943 1.15733553 1.231200367 0.957967672 0.996486933 0.990905966 1.061819764 1.128486674 1 13.35584977 -6.273595446 24.99937037 1.022810687 1.130234618 0.413774439 0.063055684 828.2403126 1703300.99 0.021029572 0.024009326 5.33E-07 6.273595446 0.107423931 NDS(ph)WGSFDLR ddPTM_A459_MK2206_30min_R2 6 NDSWGSFDLR 10 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 NDS(0.932)WGS(0.068)FDLR;NDS(0.766)WGS(0.234)FDLR;NDS(0.997)WGS(0.003)FDLR;NDS(0.975)WGS(0.025)FDLR;NDS(0.75)WGS(0.25)FDLR;NDS(0.957)WGS(0.043)FDLR 156.52 0.00050742 27577600 126247.8 171396.4 144388.3 156215 163692.1 146943.3 174247.9 139989.2 137811.4 150732.5 TRUE FALSE 135913.4286 162885.104 149202.1339 143451.7348 157264.7257 152535.3302 151368.9414 158286.2691 149797.9865 145814.1109 0.932100658 1.11707367 1.02323522 0.983798714 1.078528852 1.046094437 1.038095288 1.085534645 1.027321605 1 17.15377081 -6.273930134 24.9762326 1.04982244 1.022066689 0.080677805 0.048811295 2249.370548 4497778.681 0.014574991 0.016629263 5.32E-07 6.273930134 -0.027755751 NDSPT(ph)QIPVSSDVCR ddPTM_A459_MK2206_30min_R1 2 NDSPTQIPVSSDVCR 15 0 Q8TC07-2;Q8TC07-3;Q8TC07 Q8TC07-2 TBC1D15 TBC1 domain family member 15 1 NDS(0.102)PT(0.898)QIPVSSDVCR;NDS(0.019)PT(0.981)QIPVSSDVCR 258.13 6.93E-36 77015000 6456.8 6941.1 6453.9 5498.5 5268.6 4959.7 5375.9 5629.7 5574.1 5504.4 TRUE FALSE 5907.615254 6489.233128 6015.82725 5921.995423 5058.740506 5240.513928 5017.28352 5580.480126 6153.547642 6186.326628 0.954947194 1.048963871 0.972439318 0.957271702 0.817729294 0.847112389 0.811027904 0.902066842 0.994701381 1 12.59486729 -6.032394766 4.518947237 0.883609549 0.994411189 0.303885188 0.065062959 0.225135236 10.88929471 0.019727547 0.027219543 9.28E-07 6.032394766 0.110801639 NDSPT(ph)QIPVSSDVCR ddPTM_A459_MK2206_30min_R2 4 NDSPTQIPVSSDVCR 15 0 Q8TC07-2;Q8TC07-3;Q8TC07 Q8TC07-2 TBC1D15 TBC1 domain family member 15 1 NDS(0.417)PT(0.583)QIPVSSDVCR;NDS(0.003)PT(0.997)QIPVSSDVCR;NDS(0.01)PT(0.99)QIPVSSDVCR;NDS(0.303)PT(0.697)QIPVSSDVCR 284.23 3.28E-55 215878000 145269 151456 139681 156497 157880 139127 177355 117435 124630 162871 TRUE FALSE 156390.9063 143934.9153 144337.8948 143710.6945 151680.8379 144421.5755 154068.0755 132784.1577 135470.0921 157556.5326 0.992601854 0.913544573 0.916102255 0.91212146 0.962707388 0.91663337 0.977859013 0.842771515 0.859818948 1 17.26551005 -7.757135325 24.99997697 0.888471427 0.938300718 0.115087787 0.047663091 176.7876949 1026885.96 0.022164436 0.01221862 1.75E-08 7.757135325 0.049829291 NDSVIVADQTPT(ph)PTR ddPTM_A459_MK2206_30min_R1 2 NDSVIVADQTPTPTR 15 0 B8ZZU6;E9PBF9;P15336-5;P15336;E9PEK8;H7C2N6;P15336-3;P15336-7 B8ZZU6 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 NDSVIVADQT(0.001)PT(0.681)PT(0.317)R;NDSVIVADQT(0.089)PT(0.904)PT(0.007)R 169.67 0.000135 9666700 3365.8 3817.8 3822.8 3225.1 3510.1 2938.2 2884.5 2680.8 2793.05 2818.55 TRUE FALSE 3079.521035 3569.260526 3563.318987 3473.497761 3370.285284 3104.558345 2692.080268 2657.362048 3083.397543 3167.733253 0.97215289 1.126755393 1.124879749 1.096524702 1.063942263 0.980056746 0.849844369 0.838884412 0.973376638 1 11.62923514 -6.894438532 2.87110164 0.902620437 1.085139088 0.5994618 0.061810358 0.164620634 2.737661435 0.023705395 0.020415499 1.28E-07 6.894438532 0.182518651 NDSVIVADQTPT(ph)PTR ddPTM_A459_MK2206_30min_R2 2 NDSVIVADQTPTPTR 15 0 B8ZZU6;E9PBF9;P15336-5;P15336;E9PEK8;H7C2N6;P15336-3;P15336-7 B8ZZU6 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 NDSVIVADQT(0.01)PT(0.99)PTR;NDSVIVADQT(0.09)PT(0.898)PT(0.012)R 219.72 5.50E-09 19106900 57362 63468 60120 66917 67988 53987 62088 46673 51833 57944 TRUE FALSE 61753.67882 60316.27141 62124.37079 61449.66704 65318.44951 56041.51312 53935.77102 52773.32135 56341.34065 56053.29203 1.101695843 1.076052257 1.108309049 1.096272223 1.165291942 0.999789862 0.962223075 0.941484781 1.005138835 1 15.77451148 -6.892737255 6.049576148 0.973609691 1.106423972 0.846137085 0.027319293 0.077484644 3.874428404 0.009751357 0.008596058 1.28E-07 6.892737255 0.132814281 NEAIQAAHDAVAQEGQCR ddPTM_A459_MK2206_30min_R1 2 NEAIQAAHDAVAQEGQCR 18 0 D6R974;D6R956;P09936 D6R974 UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 0 ; 134.4 0.00054559 45115000 8432.8 9566.6 8086.1 7786.6 7270.5 6318.4 7512.9 7100.1 8297 7970 FALSE TRUE 7715.546078 8943.812601 7537.238061 8386.325281 6980.900589 6676.142348 7011.728149 7038.024574 9159.502841 8957.38377 0.861361562 0.998484918 0.841455301 0.936247178 0.779345931 0.745322799 0.782787511 0.785723237 1.022564521 1 13.1288617 -4.418758155 16.77818233 0.864897354 0.664569725 0 0.100610791 60778826.37 72836812.65 0.025620182 458673887.5 3.81E-05 4.418758155 -0.200327629 NEAIQAAHDAVAQEGQCR ddPTM_A459_MK2206_30min_R2 2 NEAIQAAHDAVAQEGQCR 18 0 D6R974;D6R956;P09936 D6R974 UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 0 ; 120.08 0.0013506 49486000 81298 94748 93799 89490 85778 83672 89176 77355 76572 95313 FALSE TRUE 87522.23739 90042.9521 96926.21184 82178.38074 82409.92472 86856.19659 77467.08408 87465.5641 83232.09415 92202.94462 0.949234732 0.976573497 1.051226859 0.891277183 0.893788426 0.942011093 0.840180153 0.948620074 0.90270538 1 16.49252521 -5.780834098 24.98816321 0.911681102 0.990767902 0.352158736 0.046471309 231.2995171 298005.6258 0.012538258 0.018628734 1.66E-06 5.780834098 0.0790868 NEDEDS(ph)PNKLYTLVTYVPVTTFK ddPTM_A459_MK2206_30min_R1 1 NEDEDSPNKLYTLVTYVPVTTFK 23 1 P62899-3;H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899;P62899-2 P62899-3 RPL31 60S ribosomal protein L31 1 NEDEDS(0.477)PNKLY(0.43)T(0.09)LVT(0.001)Y(0.002)VPVTTFK 58.904 0.0074075 2240300 624.53 733.63 712.04 749.91 473.71 555.22 493.1 610.77 817.69 972.72 TRUE FALSE 571.410444 685.8705537 663.7087087 807.6681981 454.8411276 586.6560766 460.2061987 605.4301023 902.6918016 1093.227897 0.522681909 0.62738113 0.607109195 0.738792159 0.416053349 0.53662743 0.420960899 0.553800451 0.825712373 1 10.09437847 -8.431491052 2.941483147 0.995367459 0.553342989 0.731393038 0.090188972 0.128871852 2.217870548 0.091736544 0.024680131 3.70E-09 8.431491052 -0.442024469 NEDEEEEEEEKDEAEDLLGR ddPTM_A459_MK2206_30min_R1 2 NEDEEEEEEEKDEAEDLLGR 20 1 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 0 ; 169.72 6.06E-09 30750000 4025.2 5100.8 5027.1 4108.6 2862.5 2701.4 3503.5 3855.7 5202 4783 FALSE TRUE 3682.835603 4768.736993 4685.874458 4425.045084 2748.480564 2854.350933 3269.787907 3821.990021 5742.766516 5375.55415 0.685108084 0.887115423 0.871700727 0.823179334 0.511292508 0.530987291 0.608269923 0.710994609 1.068311537 1 12.39219777 -10.12295883 6.280457774 1 0.736306415 0.177099449 0.164709375 241079487.8 37.25418048 1.606179201 0.043034667 7.53E-11 10.12295883 -0.263693585 NEDEEEEEEEKDEAEDLLGR ddPTM_A459_MK2206_30min_R2 2 NEDEEEEEEEKDEAEDLLGR 20 1 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 0 ; 196.65 4.51E-15 24711000 77105 89367 74270 57193 70860 41869 80015 80002 54974 94876 FALSE TRUE 83008.21808 84929.16473 76746.12473 52520.14895 68077.68036 43462.35413 69508.93438 90458.53609 59755.53915 91780.20389 0.904423989 0.925353847 0.836194751 0.572238312 0.741746885 0.473548241 0.75734125 0.985599642 0.651072199 1 16.48589539 -10.51114967 18.47584763 0.999999923 0.759840596 0.180037703 0.153107224 0 0 0.157355539 0.038164324 3.08E-11 10.51114967 -0.240159326 NEDS(ph)GSETAYLENR ddPTM_A459_MK2206_30min_R2 2 NEDSGSETAYLENR 14 0 J3QT39;Q49A88;Q49A88-5 J3QT39 CCDC14 Coiled-coil domain-containing protein 14 1 NEDS(0.983)GS(0.014)ET(0.002)AYLENR;NEDS(0.769)GS(0.228)ET(0.002)AYLENR 192.23 1.17E-06 8420100 14460.5 18471.8 17339.8 17831.7 19611 17394.2 20024.2 15868 14664.3 17696.9 TRUE FALSE 15567.607 17554.51727 17917.90028 16374.79307 18840.9736 18056.14847 17394.99849 17942.00208 15939.77431 17119.4516 0.909351968 1.025413528 1.046639851 0.956502197 1.100559413 1.054715355 1.016095544 1.048047712 0.931091409 1 14.06334887 -4.760929831 24.89872557 1.023742354 0.909351836 0.333579906 0.046589308 13.21106838 644898.4373 0.011264968 0.064836237 1.73E-05 4.760929831 -0.114390518 NEEDEGHS(ph)NSSPR ddPTM_A459_MK2206_30min_R2 1 NEEDEGHSNSSPR 13 0 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 NEEDEGHS(0.713)NS(0.143)S(0.143)PR 78.249 0.027438 3649000 19962 14086 16914 11778 11245 8195.7 12306 15768 9303.6 18051 TRUE FALSE 21490.30607 13386.50972 17477.90432 10815.69972 10803.4648 8507.593107 10690.20742 17828.93174 10112.81031 17461.99735 1.230690032 0.766608164 1.000910948 0.619385028 0.618684368 0.487206185 0.612198433 1.021013312 0.579132508 1 14.09193097 NEEDEGHSNS(ph)SPR ddPTM_A459_MK2206_30min_R1 3 NEEDEGHSNSSPR 13 0 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 NEEDEGHSNS(0.892)S(0.108)PR;NEEDEGHSNS(0.891)S(0.109)PR;NEEDEGHS(0.002)NS(0.75)S(0.248)PR 152.11 0.00044754 85228440 8587.37 8670.94 6624.76 5367.04 4374.65 5291.4 9324.03 7438.2 928.13 6834.35 TRUE FALSE 7856.969087 8106.46023 6175.089749 5780.410351 4200.398427 5590.994495 8702.040971 7373.168602 1024.612435 7681.040875 1.022904215 1.055385639 0.803939186 0.752555603 0.546852763 0.727895423 1.132924706 0.959917897 0.133394998 1 12.90708611 -5.325010899 3.951260345 0.756883508 1.042276867 0.15990268 0.260116292 0.411508288 12.76745427 0.070183075 0.165508131 4.73E-06 5.325010899 0.285393359 NEEDEGHSNS(ph)SPR ddPTM_A459_MK2206_30min_R2 3 NEEDEGHSNSSPR 13 0 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 NEEDEGHS(0.001)NS(0.5)S(0.5)PR;NEEDEGHS(0.002)NS(0.499)S(0.499)PR;NEEDEGHS(0.025)NS(0.775)S(0.2)PR 90.348 0.014053 2023371810 17773.4 18164.1 15934.9 20198.5 19580.6 13962.7 17094.8 18914.3 14204.8 19674.9 TRUE FALSE 19134.14517 17262.09721 16466.16161 18548.21794 18811.76726 14494.06033 14850.23223 21386.46395 15440.30783 19032.90962 1.005318974 0.906960499 0.865141586 0.974534021 0.988381053 0.761526252 0.780239728 1.123657096 0.811242639 1 14.21620851 -11.01616292 3.0125228 1.002576097 0.913277817 0.05563436 0.107526596 49838103.7 53593745.34 1052395.06 0.026321661 9.63E-12 11.01616292 -0.08929828 NEEDEGHSNSS(ph)PR ddPTM_A459_MK2206_30min_R1 1 NEEDEGHSNSSPR 13 0 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 NEEDEGHS(0.004)NS(0.401)S(0.594)PR 122.63 0.00261 21282000 190.54 141.74 0 0 0 86.851 0 75.76 0 0 TRUE FALSE 174.3335724 132.5127002 0 0 0 91.76842856 0 75.09763831 0 0 0 NEEDEGHSNSS(ph)PR ddPTM_A459_MK2206_30min_R2 3 NEEDEGHSNSSPR 13 0 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 NEEDEGHSNS(0.018)S(0.982)PR;NEEDEGHS(0.129)NS(0.222)S(0.649)PR;NEEDEGHSNS(0.025)S(0.975)PR 222.55 7.47E-09 1118230000 106217 96043 89491.5 97936 89704.2 70724.4 106716.8 99550.4 79189.1 96498 TRUE FALSE 114349.0552 91273.64428 92475.10194 89934.31552 86181.96238 73415.8666 92704.75597 112561.9791 86076.82478 93349.27816 1.22495918 0.977764864 0.990635426 0.963417364 0.923220448 0.786464213 0.993095585 1.205815206 0.922094166 1 16.51035125 -4.761248243 7.137665016 0.973127984 1.229971272 0.373012203 0.097777104 0.126993022 39.58339013 0.026034609 0.157745976 1.73E-05 4.761248243 0.256843288 NEEDEGHSNSSPR ddPTM_A459_MK2206_30min_R1 1 NEEDEGHSNSSPR 13 0 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 0 171.11 0.00029556 1048200 1712.8 1271.1 1116.3 1168.5 980.58 993.23 1751.5 1524.3 143.08 1330.3 FALSE TRUE 1567.117366 1188.351159 1040.528666 1258.498072 941.5214222 1049.465824 1634.660631 1510.973206 157.953678 1495.107607 1.048163596 0.794826508 0.695955703 0.841744144 0.629734888 0.701933305 1.093339786 1.010611677 0.10564703 1 10.54603361 -4.766955017 4.631565435 0.766994309 1.068750623 0.096042746 0.26291913 0.48654653 24.135206 0.064088202 0.483773049 1.71E-05 4.766955017 0.301756314 NEEDEGHSNSSPR ddPTM_A459_MK2206_30min_R2 3 NEEDEGHSNSSPR 13 0 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 0 ;; 211.82 7.49E-06 25908000 116330.4 139962.5 122586.9 143432.5 124929.1 131972.3 147209.5 130257.4 106959.3 133221.6 FALSE TRUE 125236.7449 133012.1658 126673.8861 131713.6059 120023.7558 136994.5984 127880.7158 147282.4894 116262.4266 128874.5901 0.971772207 1.032105442 0.982923678 1.022029291 0.931322115 1.063007054 0.992288051 1.142835755 0.90213615 1 16.97560831 -6.792327659 24.99998788 1.027245268 0.992084114 0.05399707 0.062404819 578.2659604 468026.3932 0.02052072 0.018099639 1.61E-07 6.792327659 -0.035161154 NEEPS(ph)EEEIDAPK ddPTM_A459_MK2206_30min_R1 3 NEEPSEEEIDAPK 13 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 NEEPS(1)EEEIDAPK;NEEPS(1)EEEIDAPK;NEEPS(1)EEEIDAPK 143.28 0.0011053 11175100 3147.82 3812.58 3929.08 2954.95 2776.59 2868.31 2859.83 2979.88 3550.3 3978.43 TRUE FALSE 2880.081379 3564.380349 3662.384997 3182.540761 2665.992541 3030.711233 2669.055959 2953.827223 3919.36639 4471.307944 0.644125033 0.79716727 0.819085834 0.711769532 0.596244449 0.67781313 0.596929577 0.660618159 0.876559262 1 12.12648119 -8.453876221 3.381114714 0.997569931 0.690744164 0.682038629 0.07065962 0.139403425 3.206447755 0.076373781 0.020260663 3.52E-09 8.453876221 -0.306825767 NEEPS(ph)EEEIDAPK ddPTM_A459_MK2206_30min_R2 2 NEEPSEEEIDAPK 13 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 NEEPS(1)EEEIDAPK;NEEPS(1)EEEIDAPK 166.77 0.00032335 46438000 127704 80900 82896 77191 74346 55236 122481 89308 49207 97433 TRUE FALSE 137481.1164 76882.62364 85659.71127 70884.24838 71426.80248 57338.04469 106399.0976 100980.8622 53486.93591 94253.76919 1.458627253 0.815698134 0.908820008 0.75205744 0.757813752 0.608336889 1.128857747 1.071372138 0.567477952 1 16.52426269 -4.759742865 24.97569841 0.845579973 1.458628024 0.521733117 0.176079697 35.77219471 526470.268 0.044248978 0.275287364 1.74E-05 4.759742865 0.613048051 NEEPS(ph)EEEIDAPKPK ddPTM_A459_MK2206_30min_R1 7 NEEPSEEEIDAPKPK 15 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK 154.39 0.00021162 4315872000 38227.3 48305.9 43389.1 42132.6 29168.22 31181.5 30234.6 32237.3 36942 28731.75 TRUE FALSE 34975.8674 45161.17713 40443.96878 45377.66015 28006.38803 32946.96958 28217.705 31955.45268 40782.2531 32291.2561 1.083137407 1.39855746 1.252474312 1.405261536 0.867305624 1.020306224 0.873849717 0.989600794 1.262950347 1 14.97885594 -6.259739785 24.99949198 0.996289742 1.290665997 0.525474941 0.131404379 119.0402665 1750970.172 0.039047866 0.047807782 5.50E-07 6.259739785 0.294376255 NEEPS(ph)EEEIDAPKPK ddPTM_A459_MK2206_30min_R2 9 NEEPSEEEIDAPKPK 15 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK 185.28 0.00010113 5258593200 1604484 1530442 1538121 1442557 1556385 960256 1980499 1444406 1036449 1666217 TRUE FALSE 1727324.529 1454442.476 1589401.186 1324695.479 1495273.505 996799.215 1720457.102 1633194.824 1126597.461 1611848.476 1.071642003 0.902344419 0.986073574 0.821848641 0.927676222 0.618419926 1.067381412 1.013243396 0.698947499 1 20.6202847 -1.743222265 1.003590546 0.88357792 113.9996385 0.136354274 0.135675625 2099.058673 4.692506848 0.042429406 544587.4154 0.018062495 1.743222265 113.1160606 NEEPVRS(ph)PER ddPTM_A459_MK2206_30min_R2 1 NEEPVRSPER 10 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 NEEPVRS(1)PER 84.687 0.020634 41664000 21685 24121 18778 21665 20423 19104 22696 21299 17480 23822 TRUE FALSE 23345.22027 22923.18622 19404.04915 19894.9002 19621.0904 19831.01611 19715.98794 24082.85243 19000.3788 23044.69009 1.01304119 0.994727468 0.842018229 0.863318193 0.851436506 0.86054601 0.855554484 1.045049959 0.824501381 1 14.49214675 -10.60510542 14.91464128 0.999999999 0.904800915 0.119980829 0.076690613 0 0 0.076213936 0.018484595 2.48E-11 10.60510542 -0.095199084 NEGNLENEGKPEDEVEPDDEGKS(ph)DEEEKPDVEGK ddPTM_A459_MK2206_30min_R2 1 NEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGK 34 3 Q969E4 Q969E4 TCEAL3 Transcription elongation factor A protein-like 3 1 NEGNLENEGKPEDEVEPDDEGKS(1)DEEEKPDVEGK 56.68 0.00060678 6687700 20804 13876 16669 11434 10835 7725.4 14800 10219 8648.8 20499 TRUE FALSE 22396.77024 13186.93802 17224.73614 10499.80562 10409.56346 8019.39551 12856.74222 11554.65839 9401.056991 19830.11931 1.129431946 0.664995395 0.868614852 0.529487769 0.524937006 0.404404804 0.648344169 0.582682242 0.474079699 1 14.27540574 -1.522879193 0.830186217 0.580104678 164.1144914 0.424648264 0.172243076 518.0721786 1.572894386 0.056700836 159768.2658 0.029999969 1.522879193 163.5343867 NEGS(ph)ESAPEGQAQQR ddPTM_A459_MK2206_30min_R2 3 NEGSESAPEGQAQQR 15 0 H0Y449;P67809;C9J5V9 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 NEGS(0.715)ES(0.285)APEGQAQQR;NEGS(0.5)ES(0.5)APEGQAQQR;NEGS(0.665)ES(0.335)APEGQAQQR 198.67 2.45E-05 190879100 22632.8 17166.1 17375.7 17911 19331.9 15026.6 21542 17556.2 13279.8 23275 TRUE FALSE 24365.58457 16313.65644 17954.99717 16447.61401 18572.83247 15598.44779 18713.50952 19850.85562 14434.853 22515.53866 1.082167517 0.724551017 0.79744915 0.730500578 0.824889546 0.692785904 0.831137545 0.881651375 0.64110627 1 14.45863337 -4.75422231 24.99743429 0.785332129 1.082168036 0.44271226 0.097589042 217.9735688 754920.7128 0.022169741 0.220223385 1.76E-05 4.75422231 0.296835906 NEGSES(ph)APEGQAQQR ddPTM_A459_MK2206_30min_R1 4 NEGSESAPEGQAQQR 15 0 H0Y449;P67809;C9J5V9 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 NEGS(0.227)ES(0.773)APEGQAQQR;NEGS(0.226)ES(0.774)APEGQAQQR;NEGS(0.003)ES(0.997)APEGQAQQR;NEGS(0.003)ES(0.997)APEGQAQQR 271.27 5.34E-45 77807080 5783.04 6000.83 5398.38 4271.06 4287.29 5105.54 7061.7 5681.66 7328.44 9731.74 TRUE FALSE 5291.16208 5610.174876 5031.953006 4600.017781 4116.518161 5394.611263 6590.626878 5631.985846 8090.257563 10937.38142 0.483768635 0.512935835 0.460069263 0.420577614 0.376371455 0.493226948 0.602578133 0.514930003 0.739688711 1 13.41697976 -8.589957608 0.849794727 1.003000357 0.457141589 0.911536116 0.051974318 0.202882795 0.321139122 0.053549635 0.018961585 2.57E-09 8.589957608 -0.545858769 down NEHRPAS(ph)ALVNPLAR ddPTM_A459_MK2206_30min_R2 2 NEHRPASALVNPLAR 15 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 NEHRPAS(1)ALVNPLAR;NEHRPAS(1)ALVNPLAR 68.088 0.032143 25568000 25384 30396 29849 35129 36111 23619 38117 28105 31580 36121 TRUE FALSE 27327.41856 28886.57884 30844.15076 32258.84833 34693.1007 24517.8376 33112.19211 31778.42 34326.77132 34942.37473 0.782071017 0.82669192 0.882714784 0.923201373 0.992866139 0.701664892 0.947622832 0.909452212 0.982382325 1 15.09269004 -1.522878747 0.088394739 1.082730638 0.34099028 0.318952556 0.076957039 219.8279071 1.405844757 1.579751566 19.78294844 0.03 1.522878747 -0.741740357 NEIIQS(ph)PISQVPSVEK ddPTM_A459_MK2206_30min_R1 2 NEIIQSPISQVPSVEK 16 0 Q7Z3T8 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 1 NEIIQS(0.622)PIS(0.378)QVPSVEK;NEIIQS(0.998)PIS(0.002)QVPSVEK 210.43 4.61E-08 12282800 11711.3 10316.3 10935.7 8552.5 8006.8 6418.1 7414.7 8277.6 7617.1 7254.8 TRUE FALSE 10715.19244 9644.706995 10193.41515 9211.215032 7687.872201 6781.487276 6920.078892 8205.229816 8408.924803 8153.579395 1.314170368 1.182880123 1.250176721 1.129714275 0.942883098 0.831719046 0.848716687 1.006334693 1.031316971 1 12.99321782 -6.099329746 2.689535861 0.932196654 1.241670145 0.805530888 0.068048629 0.126613384 1.786280311 0.023240113 0.032586261 7.96E-07 6.099329746 0.309473492 NEIIQS(ph)PISQVPSVEK ddPTM_A459_MK2206_30min_R2 2 NEIIQSPISQVPSVEK 16 0 Q7Z3T8 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 1 NEIIQS(1)PISQVPSVEK;NEIIQS(0.999)PIS(0.001)QVPSVEK 279.27 1.66E-62 14595100 142196 131549 105860 106580 114901 76666 111559 71977 71390 100405 TRUE FALSE 153082.6351 125016.468 109389.3196 97872.07307 110389.4094 79583.57835 96911.16929 81384.64103 77599.37316 97128.79307 1.576078836 1.287120575 1.126229577 1.00765252 1.136526111 0.819361343 0.997759431 0.837904379 0.798932744 1 16.56761141 -1.522878749 0.431320752 0.878820794 15.05208776 0.851239895 0.087421847 27.73099933 0.347605862 0.055870318 341.8619883 0.03 1.522878749 14.17326697 NEKPTQSVS(ph)SPEATSGSTGSVEK ddPTM_A459_MK2206_30min_R1 1 NEKPTQSVSSPEATSGSTGSVEK 23 1 H0YE68;Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95 H0YE68 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 NEKPTQSVS(0.5)S(0.5)PEATSGSTGSVEK 140.81 1.40E-06 20255000 4133.5 4849.9 4390 4151 3433.9 3755.6 3661.4 3716.2 4338.1 3914.8 TRUE FALSE 3781.924119 4534.170628 4092.019031 4470.710739 3297.120492 3968.238826 3417.154687 3683.709655 4789.061019 4399.794979 0.859568261 1.030541343 0.930047661 1.016117969 0.749380484 0.901914486 0.776662254 0.837245752 1.088473677 1 12.10322058 -4.472356292 16.25207061 0.914489273 0.495834212 0.024082965 0.106772226 4174980.459 36298318.8 0.026829299 55292997.27 3.37E-05 4.472356292 -0.418655061 NEKPTQSVS(ph)SPEATSGSTGSVEK ddPTM_A459_MK2206_30min_R2 1 NEKPTQSVSSPEATSGSTGSVEK 23 1 H0YE68;Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95 H0YE68 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 NEKPT(0.001)QS(0.003)VS(0.491)S(0.491)PEAT(0.009)S(0.004)GS(0.001)TGSVEK 57.768 0.0084568 15481000 23355 17143 20120 21309 21197 17260 27489 21140 14438 23956 TRUE FALSE 25143.07676 16291.70355 20790.79076 19567.98654 20364.69927 17916.84139 23879.66128 23903.07058 15693.79114 23174.31768 1.084954349 0.703006827 0.897147914 0.844382424 0.878761548 0.773133502 1.030436434 1.031446574 0.67720618 1 14.50023924 -7.257693948 24.99179367 0.937392842 0.85761175 0.064150099 0.131920176 904.2151989 6033497.461 0.049533044 0.036906339 5.52E-08 7.257693948 -0.079781092 NEKPTQSVSS(ph)PEATSGSTGSVEK ddPTM_A459_MK2206_30min_R1 1 NEKPTQSVSSPEATSGSTGSVEK 23 1 H0YE68;Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95 H0YE68 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 NEKPTQSVS(0.14)S(0.86)PEATSGSTGSVEK 148.15 6.16E-08 2973600 798.36 618.67 650.35 541.93 663.06 654.03 566.01 463.93 581.18 524.58 TRUE FALSE 730.4552896 578.3944706 606.206054 583.6695425 636.6489161 691.0606134 528.2525056 459.8739089 641.5957408 589.5689308 1.238965033 0.981046389 1.028219132 0.989993726 1.079854929 1.172145575 0.895997869 0.780017204 1.088245508 1 9.203516689 -7.280982789 24.86000055 0.922733232 1.070444937 0.292887189 0.104654302 959.8728714 1220991.799 0.043186461 0.029167197 5.24E-08 7.280982789 0.147711705 NEKPTQSVSS(ph)PEATSGSTGSVEK ddPTM_A459_MK2206_30min_R2 3 NEKPTQSVSSPEATSGSTGSVEK 23 1 H0YE68;Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95 H0YE68 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 NEKPTQS(0.001)VS(0.169)S(0.822)PEAT(0.005)S(0.002)GS(0.001)TGSVEK;NEKPTQSVS(0.189)S(0.801)PEAT(0.004)S(0.002)GS(0.002)T(0.001)GSVEK;NEKPTQSVS(0.181)S(0.792)PEAT(0.016)S(0.006)GS(0.004)T(0.001)GSVEK 118.41 5.89E-06 80664000 179638 189553 175596 167821 156250 131176 215325 178933 118409 184788 TRUE FALSE 193391.2234 180140.0737 181450.283 154109.4875 150114.8399 136167.9946 187052.5688 202320.1575 128708.0008 178758.3827 1.081858207 1.007729377 1.015058876 0.862110549 0.839763918 0.761743268 1.046398865 1.131807943 0.720010994 1 17.44765137 -5.645758243 5.801477676 0.911327308 1.036542655 0.189242712 0.120096851 0.384961154 17.95977516 0.034165388 0.05983062 2.26E-06 5.645758243 0.125215348 NEKPTQSVSS(ph)PEATSGSTGSVEKK ddPTM_A459_MK2206_30min_R2 1 NEKPTQSVSSPEATSGSTGSVEKK 24 2 H0YE68;Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95 H0YE68 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 NEKPTQS(0.001)VS(0.212)S(0.601)PEAT(0.121)S(0.035)GS(0.014)T(0.014)GS(0.001)VEKK 56.48 0.0053862 4710300 26975 37039 29726 35309 39956 25517 41206 26316 32006 31977 TRUE FALSE 29040.22674 35199.69712 30717.05 32424.14175 38387.12668 26488.06732 35795.6027 29755.59156 34789.82403 30933.59311 0.93879255 1.137911687 0.992999743 1.048185435 1.240952725 0.856288089 1.157175714 0.961918373 1.124661591 1 14.9168868 -4.730902466 23.97072456 1.056806243 0.938791328 0.102303307 0.105711958 5336.638473 4188741.338 0.024260823 2.802657472 1.86E-05 4.730902466 -0.118014915 NELDS(ph)PHEEKQDK ddPTM_A459_MK2206_30min_R2 1 NELDSPHEEKQDK 13 1 Q8TBZ6 Q8TBZ6 TRMT10A tRNA methyltransferase 10 homolog A 1 NELDS(1)PHEEKQDK 62.813 0.046465 5046400 24939 22125 24856 21217 15777 12110 27459 18383 12761 20180 TRUE FALSE 26848.34901 21026.30467 25684.68663 19483.50323 15157.51571 12570.85454 23853.60032 20785.72122 13870.92871 19521.52825 1.37532004 1.077082921 1.315710855 0.998052149 0.776451286 0.64394828 1.221912547 1.064758914 0.710545226 1 14.25277838 -5.896223967 4.911564864 0.907408047 1.236066529 0.444261019 0.175951414 0.214855594 8.47053715 0.052205806 0.079071952 1.27E-06 5.896223967 0.328658481 NELMYQLEQDHDLQAILQER ddPTM_A459_MK2206_30min_R1 1 NELMYQLEQDHDLQAILQER 20 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 81.949 0.0049176 1585300 517.73 761.36 658.92 714.05 683.4 741.84 621.9 568.61 556.7 638.03 FALSE TRUE 473.6943448 711.7953256 614.1943463 769.0462547 656.1787309 783.8423397 580.4141857 563.6387027 614.5709572 717.0739733 0.660593415 0.992638629 0.856528572 1.072478271 0.915078158 1.093112244 0.809420237 0.786025883 0.857053777 1 9.485978145 -10.47677816 13.48384949 0.999901948 0.901590453 0.05724118 0.125816978 0 0 0.121619148 0.029496976 3.34E-11 10.47677816 -0.098311495 NELQEPCDS(ph)PK ddPTM_A459_MK2206_30min_R1 2 NELQEPCDSPK 11 0 O94913 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 NELQEPCDS(1)PK;NELQEPCDS(1)PK 146.77 0.00067829 34304000 5241.9 6406.5 6162.7 5616.8 3031.5 3008.8 3775.4 3993.8 4840.6 4775.6 TRUE FALSE 4796.048879 5989.435686 5744.393094 6049.406909 2910.748936 3179.155656 3523.549955 3958.882628 5343.797692 5367.237382 0.893578677 1.115925244 1.070269989 1.127098818 0.542317906 0.592326262 0.656492289 0.737601553 0.99563282 1 12.38996398 -6.248644137 24.99815815 0.727976627 1.057629545 0.465814902 0.154598275 653.1497802 1276062.996 0.046536519 0.059685116 5.64E-07 6.248644137 0.329652918 NELQEPCDS(ph)PK ddPTM_A459_MK2206_30min_R2 4 NELQEPCDSPK 11 0 O94913 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 NELQEPCDS(1)PK;NELQEPCDS(1)PK;NELQEPCDS(1)PK;NELQEPCDS(1)PK 157.09 0.0005557 112533900 205342 188976 201467 150182 158241 115526 206241 151004 122962 190418 TRUE FALSE 221063.1414 179591.7266 208183.8092 137911.6502 152027.6632 119922.4229 179161.309 170740.7413 133657.0125 184204.6763 1.200095165 0.974957478 1.13017657 0.74868702 0.825319239 0.651028114 0.972620851 0.926907746 0.725589682 1 17.49095016 -5.755962037 24.99972335 0.830263907 1.089064565 0.522407036 0.11628231 107.9821508 492845.9046 0.031352572 0.052374598 1.75E-06 5.755962037 0.258800658 NENTEGS(ph)PQEDGVELEGLK ddPTM_A459_MK2206_30min_R1 4 NENTEGSPQEDGVELEGLK 19 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 NENT(0.017)EGS(0.983)PQEDGVELEGLK;NENT(0.02)EGS(0.98)PQEDGVELEGLK;NENTEGS(1)PQEDGVELEGLK;NENT(0.009)EGS(0.991)PQEDGVELEGLK 271.58 8.85E-59 22247200 25960 26134.2 24116.8 24306.6 18805.1 19255.8 20615.5 19839.8 23717.1 23208.4 TRUE FALSE 23751.96568 24432.85883 22479.81881 26178.69854 18056.05305 20346.04676 19240.27761 19666.34272 26182.57742 26083.63181 0.910608072 0.936712303 0.861836226 1.003644689 0.692236924 0.780031205 0.737637985 0.753972563 1.003793399 1 14.67085714 -6.249893546 24.95770617 0.808732895 0.924068022 0.16868946 0.103743091 1137.202429 2458198.39 0.029994979 0.03837037 5.62E-07 6.249893546 0.115335127 NENTEGS(ph)PQEDGVELEGLK ddPTM_A459_MK2206_30min_R2 4 NENTEGSPQEDGVELEGLK 19 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 NENTEGS(1)PQEDGVELEGLK;NENT(0.007)EGS(0.993)PQEDGVELEGLK;NENTEGS(1)PQEDGVELEGLK;NENT(0.035)EGS(0.965)PQEDGVELEGLK 227.36 1.74E-23 56678000 142088 148933 133094 152238 122105 113476 179508 140319 87998 141117 TRUE FALSE 152966.3665 141537.2038 137531.2875 139799.6684 117310.5442 117794.4087 155938.384 158659.1751 95651.90698 136512.3638 1.120531227 1.03680868 1.007463966 1.024080636 0.859340069 0.862884543 1.142302276 1.162233007 0.700683105 1 17.0586721 -4.780428157 1.149970968 0.971215489 1.188660242 0.124525477 0.129164239 3.989824147 4.382074895 0.041231056 1.055819145 1.66E-05 4.780428157 0.217444753 NES(ph)PPQVPVYNNSHK ddPTM_A459_MK2206_30min_R1 1 NESPPQVPVYNNSHK 15 0 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 NES(1)PPQVPVYNNSHK 108.71 0.0033895 0 1910.5 1987 1929.9 1538.9 1796.9 1842 1816.7 1620.7 2093.6 1593.3 TRUE FALSE 1748.001943 1857.645939 1798.903765 1657.426345 1725.325668 1946.292448 1695.511258 1606.530391 2311.237212 1790.690033 0.976161095 1.03739112 1.004586909 0.925579701 0.963497666 1.086895226 0.94684799 0.897157164 1.290696419 1 10.80629991 -8.248026435 24.9984999 1.145348238 0.982638309 0.388817542 0.082977901 667.672986 1244388.201 0.053840915 0.020102232 5.65E-09 8.248026435 -0.162709929 NES(ph)PPQVPVYNNSHK ddPTM_A459_MK2206_30min_R2 2 NESPPQVPVYNNSHK 15 0 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 NES(1)PPQVPVYNNSHK;NES(0.999)PPQVPVY(0.001)NNSHK 96.848 0.010243 12072000 43577 46681 49585 54947 49092 39772 61157 43171 41486 62312 TRUE FALSE 46913.28863 44362.88942 51238.13915 50457.65433 47164.40141 41285.55133 53127.01244 48813.59793 45094.37729 60278.76454 0.778272232 0.735962154 0.85001973 0.837071807 0.78243809 0.684910377 0.881355364 0.809797585 0.748097238 1 15.87936223 -11.45999453 2.381648268 1.147763933 0.791333199 0.565933811 0.055219459 13691507.29 6349830.444 11232177.44 0.014025602 3.47E-12 11.45999453 -0.356430734 NES(ph)SPAPPDSDADK ddPTM_A459_MK2206_30min_R2 1 NESSPAPPDSDADK 14 0 J3KTD7;Q8ND04;Q8ND04-2 J3KTD7 SMG8 Protein SMG8 1 NES(0.883)S(0.117)PAPPDSDADK 125.36 0.0013861 4597900 58098 31271 40238 30125 27487 24197 48915 32793 27050 45492 TRUE FALSE 62546.02755 29718.12761 41579.51484 27663.69113 26407.72227 25117.83379 42492.40174 37079.1577 29402.7601 44007.59977 1.421255144 0.675295353 0.944825781 0.628611678 0.600071861 0.570761276 0.965569628 0.8425626 0.668129147 1 15.42546507 -4.757105087 24.9463139 0.757496379 1.421256153 0.620835501 0.153440021 84.01056421 483464.7685 0.038468366 0.293570388 1.75E-05 4.757105087 0.663759775 NES(ph)SPAPPDSDADKLK ddPTM_A459_MK2206_30min_R2 1 NESSPAPPDSDADKLK 16 1 J3KTD7;Q8ND04;Q8ND04-2 J3KTD7 SMG8 Protein SMG8 1 NES(0.5)S(0.5)PAPPDSDADKLK 84.436 0.0094002 11337000 75164 63742 76749 57803 58718 38212 78244 68129 45613 74884 TRUE FALSE 80918.61363 60576.66497 79307.77335 53080.31 56412.43629 39666.18444 67970.46881 77033.69422 49580.33629 72440.54121 1.117034913 0.836226013 1.094798189 0.732743145 0.778741232 0.547568858 0.938293222 1.063405835 0.684428021 1 16.1445097 NESS(ph)PAPPDSDADK ddPTM_A459_MK2206_30min_R2 1 NESSPAPPDSDADK 14 0 J3KTD7;Q8ND04;Q8ND04-2 J3KTD7 SMG8 Protein SMG8 1 NES(0.065)S(0.935)PAPPDSDADK 199.33 8.32E-05 3632100 78901 47200 48693 44936 42212 34360 66786 47932 29642 65746 TRUE FALSE 84941.72122 44856.11664 50316.40032 41264.58506 40554.54478 35667.59388 58016.91798 54196.87698 32220.20758 63600.7134 1.335546674 0.705276942 0.791129496 0.648806953 0.637642923 0.560804934 0.912205459 0.852142595 0.506601355 1 15.95675533 -4.760230514 24.99408817 0.726455101 1.335547406 0.596180009 0.148138839 20.3867616 421334.9965 0.035833441 0.215502411 1.74E-05 4.760230514 0.609092305 NESS(ph)PAPPDSDADKLK ddPTM_A459_MK2206_30min_R1 1 NESSPAPPDSDADKLK 16 1 J3KTD7;Q8ND04;Q8ND04-2 J3KTD7 SMG8 Protein SMG8 1 NES(0.021)S(0.979)PAPPDSDADKLK 227 2.11E-14 4979100 2363.6 2538.9 2652.4 2065.1 1582.4 1595.5 1654.5 1723.1 2608.4 3242.8 TRUE FALSE 2162.563408 2373.617149 2472.362478 2224.15436 1519.369657 1685.835831 1544.131324 1708.035118 2879.552514 3644.542546 0.593370329 0.651279857 0.678373883 0.61026983 0.416888989 0.462564454 0.423683166 0.468655557 0.790099849 1 11.83152203 -8.492334575 3.588076195 0.998095466 0.539666367 0.73654067 0.089627864 0.116654672 3.556387514 0.101281853 0.026716553 3.22E-09 8.492334575 -0.458429099 NESS(ph)PAPPDSDADKLK ddPTM_A459_MK2206_30min_R2 2 NESSPAPPDSDADKLK 16 1 J3KTD7;Q8ND04;Q8ND04-2 J3KTD7 SMG8 Protein SMG8 1 NES(0.277)S(0.723)PAPPDSDADKLK;NES(0.272)S(0.728)PAPPDSDADKLK 73.346 0.019213 42395000 210251 162534 186690 161694 201695 113817 213365 146674 138922 246808 TRUE FALSE 226347.9782 154462.7979 192914.1514 148483.083 193775.4409 118148.3857 185349.9192 165844.7954 151005.1844 238754.6752 0.948035795 0.64695193 0.808001566 0.621906494 0.81160899 0.494852658 0.776319538 0.694624284 0.632470063 1 17.86516946 -10.62213138 4.090050096 1.000054005 0.710546454 0.334349659 0.120504348 159778656.4 307228983.2 128181.3805 0.028017987 2.39E-11 10.62213138 -0.289507552 NESSDSALGDS(ph)ESEDTGHDMTR ddPTM_A459_MK2206_30min_R2 1 NESSDSALGDSESEDTGHDMTR 22 0 J3KNG8;Q8TF40;A0A087WX11;Q8TF40-3 J3KNG8 FNIP1 Folliculin-interacting protein 1 1 NESSDSALGDS(0.986)ES(0.014)EDTGHDMTR 104.54 4.53E-05 5029500 73694 74097 80109 84912 85772 62185 85944 84486 86778 92662 TRUE FALSE 79336.0693 70417.45073 82779.79408 77974.41798 82404.16031 64551.49375 74659.44956 95528.61028 94325.79358 89638.44653 0.885067428 0.785571967 0.923485371 0.869876945 0.919294828 0.720131777 0.832895398 1.065710239 1.052291703 1 16.45183003 -7.760178141 24.99999346 1.044250766 0.847205062 0.683186452 0.059663665 18.8830551 374322.2183 0.030558092 0.016386149 1.74E-08 7.760178141 -0.197045704 NESSDSALGDSES(ph)EDTGHDMTR ddPTM_A459_MK2206_30min_R2 1 NESSDSALGDSESEDTGHDMTR 22 0 J3KNG8;Q8TF40;A0A087WX11;Q8TF40-3 J3KNG8 FNIP1 Folliculin-interacting protein 1 1 NESSDSALGDS(0.487)ES(0.512)EDTGHDMTR 97.128 0.00012442 9881600 63377 81572 86274 102870 95986 72082 91507 77459 80619 79765 TRUE FALSE 68229.19185 77521.2531 89150.3321 94465.19194 92217.10735 74825.13102 79492.02098 87583.15726 87631.09489 77162.27458 0.88422992 1.004652254 1.15536164 1.224240634 1.19510613 0.969711318 1.030192817 1.135051523 1.13567278 1 16.23560805 -4.95734234 3.192205256 1.109846697 0.88494539 0.435852379 0.078947158 0.266204345 5.130375011 0.022175632 0.12135166 1.10E-05 4.95734234 -0.224901306 NESSNAS(ph)EEEACEK ddPTM_A459_MK2206_30min_R2 2 NESSNASEEEACEK 14 0 Q9H6Z4;Q9H6Z4-3;Q9H6Z4-2;B7Z7F3;K7EN31 Q9H6Z4 RANBP3 Ran-binding protein 3 1 NESSNAS(1)EEEACEK;NESS(0.001)NAS(0.999)EEEACEK 178 7.10E-05 8605100 37046 26598 25872 26119 26250 21685 33024 32287 20569.7 38349 TRUE FALSE 39882.27024 25277.182 26734.55957 23984.99415 25219.2931 22510.23787 28687.90913 36507.02176 22358.81532 37097.67527 1.075061172 0.681368356 0.720653232 0.646536312 0.67980791 0.606782978 0.773307463 0.984078422 0.602701252 1 15.17904116 -13.31616167 18.33854575 0.995879355 0.761206277 0 0.167961217 0 0 0 0.03720728 4.83E-14 13.31616167 -0.234673079 NET(ph)RVPCST(ph)VPVTTEVS(ph)Y(ph)AGCTK ddPTM_A459_MK2206_30min_R2 1 NETRVPCSTVPVTTEVSYAGCTK 23 1 A0A0G2JR65;Q02817 A0A0G2JR65 MUC2 Mucin-2 4 NET(0.531)RVPCS(0.531)T(0.905)VPVT(0.257)T(0.257)EVS(0.75)Y(0.741)AGCT(0.029)K 44.415 0.043047 4524200 7057.6 9643 8732.5 8700.3 9807.4 9481.2 13457 7419.5 7910 10346 TRUE FALSE 7597.935282 9164.142642 9023.637192 7989.457659 9422.312198 9842.01371 11690.07974 8389.254125 8597.997502 10008.41087 0.759155013 0.915644128 0.901605391 0.798274348 0.941439388 0.983374268 1.168025563 0.838220396 0.859077192 1 13.2889253 -6.434944256 5.437398179 0.971184254 0.853441157 0.287439348 0.09389018 0.340482837 16.17007833 0.031193018 0.035185045 3.67E-07 6.434944256 -0.117743097 NEVNGTSEDIKSEGDTQS(ph)N ddPTM_A459_MK2206_30min_R2 5 NEVNGTSEDIKSEGDTQSN 19 1 O95232 O95232 LUC7L3 Luc7-like protein 3 1 NEVNGTSEDIKS(0.088)EGDT(0.196)QS(0.716)N;NEVNGTSEDIKS(0.376)EGDT(0.027)QS(0.597)N;NEVNGTSEDIKS(0.029)EGDT(0.014)QS(0.957)N;NEVNGTSEDIKSEGDT(0.002)QS(0.998)N;NEVNGTSEDIKS(0.003)EGDT(0.02)QS(0.977)N 178.71 3.08E-12 20436000 213136 160957 184757 137326 146065 101290.4 193846 142889 105179.6 202642 TRUE FALSE 229453.856 152964.1094 190916.7062 126106.0265 140329.7542 105145.0771 168393.7873 161565.0829 114327.9315 196029.8081 1.170504926 0.780310458 0.973916712 0.64330026 0.715859264 0.536372902 0.859021334 0.824186303 0.583217076 1 17.58071352 -1.683824142 0.943720772 0.738121018 199.914766 0.398854678 0.146977571 801.3935838 2.042271299 0.046492337 343623.3613 0.020709798 1.683824142 199.176645 NFDFEGS(ph)LSPVIAPK ddPTM_A459_MK2206_30min_R2 1 NFDFEGSLSPVIAPK 15 0 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 NFDFEGS(0.661)LS(0.339)PVIAPK 116.04 0.0023037 56779000 381050 437840 418330 416950 452170 327580 460840 325640 364220 402610 TRUE FALSE 410223.481 416097.5023 432276.9134 382883.8512 434415.5338 340046.2864 400331.1544 368202.2661 395899.1972 389472.8687 1.053278711 1.068360689 1.109902507 0.983082217 1.115393571 0.873093645 1.027879441 0.945386176 1.016500067 1 18.57116331 -6.741106197 24.99999866 0.972615171 1.063966574 0.439490343 0.052731971 224.9778627 276613.6612 0.01630215 0.016283872 1.82E-07 6.741106197 0.091351403 NFDFEGSLS(ph)PVIAPK ddPTM_A459_MK2206_30min_R1 2 NFDFEGSLSPVIAPK 15 0 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 NFDFEGS(0.122)LS(0.878)PVIAPK;NFDFEGS(0.023)LS(0.977)PVIAPK 137.32 0.00040211 207031000 18605.5 18537.6 18642.6 15941.5 15985.5 13392.6 15754.5 15778.2 15156.3 13667.6 TRUE FALSE 17023.00452 17330.79887 17377.19225 17169.31709 15348.76369 14150.87744 14703.54605 15640.25286 16731.85162 15360.84547 1.108207524 1.128245115 1.131265351 1.117732557 0.999213469 0.921230375 0.957209424 1.018189584 1.0892533 1 13.90697 -6.263279082 5.584339727 0.992118503 1.123217607 0.68663662 0.040921711 0.102277479 12.33648181 0.013776519 0.016707879 5.45E-07 6.263279082 0.131099104 NFDFEGSLS(ph)PVIAPK ddPTM_A459_MK2206_30min_R2 3 NFDFEGSLSPVIAPK 15 0 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 NFDFEGS(0.24)LS(0.76)PVIAPK;NFDFEGS(0.015)LS(0.985)PVIAPK;NFDFEGS(0.002)LS(0.998)PVIAPK 180.02 2.01E-05 61831100 229002 263569 230527 239285 241064 210301 262391 186362 199596 227006 TRUE FALSE 246534.5692 250480.5467 238212.6551 219734.6501 231598.6161 218304.1519 227938.7465 210720.1533 216956.4993 219598.8128 1.122658934 1.140627964 1.084762946 1.00061857 1.054644208 0.994104427 1.037978045 0.959568727 0.987967542 1 17.74451073 -5.601939856 2.610774196 1.005377205 1.131850803 0.807540904 0.025424066 0.116283606 1.591811946 0.007518665 0.015642747 2.50E-06 5.601939856 0.126473598 NFEHLNSDFDR ddPTM_A459_MK2206_30min_R1 2 NFEHLNSDFDR 11 0 P48163 P48163 ME1 NADP-dependent malic enzyme 0 ; 122.18 0.0056337 6573500 7366.5 7013.6 6933.4 5930.2 7209.9 7448.9 7872.5 6884.1 6347.7 6055.8 FALSE TRUE 6739.940492 6557.013365 6462.780126 6386.945032 6922.714416 7870.650281 7347.339889 6823.913039 7007.56613 6806.038223 0.990288369 0.963411187 0.949565652 0.938423327 1.017143041 1.156421698 1.079532563 1.002626317 1.029610164 1 12.73259954 -6.518079761 24.98774181 1.058905324 0.962100542 0.503108355 0.043525052 177.1874258 922601.1164 0.015117649 0.015507732 3.03E-07 6.518079761 -0.096804783 NFEHLNSDFDR ddPTM_A459_MK2206_30min_R2 3 NFEHLNSDFDR 11 0 P48163 P48163 ME1 NADP-dependent malic enzyme 0 ;; 168.85 0.00064002 27074000 162796 191076 162868 205291 184454 183149 210299 174107 162942 170687 FALSE TRUE 175259.7869 181587.4437 168297.9378 188518.0686 177211.4092 190118.8635 182686.4887 196863.3827 177114.4006 165117.4972 1.061424682 1.099746828 1.019261682 1.141720725 1.073244279 1.151415609 1.106402966 1.192262395 1.072656767 1 17.33313348 -5.773881113 24.98827928 1.114018059 1.064104629 0.117515618 0.052922587 382.1467304 767513.681 0.013965604 0.020878463 1.68E-06 5.773881113 -0.04991343 NFELVDS(ph)SPCK ddPTM_A459_MK2206_30min_R2 1 NFELVDSSPCK 11 0 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 NFELVDS(0.758)S(0.242)PCK 185.57 1.90E-05 3562300 47337 34137 31418 30651 30778 30426 45482 32996 24942 45832 TRUE FALSE 50961.15712 32441.80622 32465.46044 28146.71525 29569.50107 31583.88275 39510.15877 37308.69049 27111.41008 44336.50559 1.149417538 0.731717707 0.732251223 0.634842888 0.666933505 0.712367435 0.891142823 0.841489197 0.61149181 1 15.43620745 -4.760001387 24.99137844 0.748304255 1.149418028 0.508430844 0.115097196 29.38083389 510439.5619 0.02821037 0.172511022 1.74E-05 4.760001387 0.401113774 NFELVDS(ph)SPCKK ddPTM_A459_MK2206_30min_R1 1 NFELVDSSPCKK 12 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 NFELVDS(0.5)S(0.5)PCKK 83.292 0.017819 58420000 6949.9 8008 8148.6 6655.6 5133.6 4285.2 5382.4 6679.6 7183.1 5731.1 TRUE FALSE 6358.77451 7486.677744 7595.495735 7168.215465 4929.117841 4527.824321 5023.349917 6621.200961 7929.80895 6441.111936 0.987216893 1.162326912 1.179221198 1.112884784 0.765258839 0.702956938 0.779888623 1.027959307 1.231124227 1 12.65309405 -6.211389904 13.65531929 0.901626478 1.11907855 0.274664887 0.151659236 3.64675302 993.3334056 0.049364881 0.063721176 6.15E-07 6.211389904 0.217452072 NFELVDS(ph)SPCKK ddPTM_A459_MK2206_30min_R2 1 NFELVDSSPCKK 12 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 NFELVDS(0.5)S(0.5)PCKK 127.66 0.0045986 11031000 83605 75431 75959 72282 93806 58625 93628 67613 58120 96545 TRUE FALSE 90005.86308 71685.20623 78491.43515 66376.32938 90122.7051 60856.01546 81334.53113 76450.25125 63175.17254 93394.74456 0.963714431 0.76755075 0.840426681 0.710707328 0.964965486 0.651599999 0.870868393 0.818571233 0.676431772 1 16.51105375 -4.753020578 24.82514046 0.805015751 0.963714755 0.146638727 0.109428048 521.4691593 1537565.548 0.024736926 0.276400447 1.77E-05 4.753020578 0.158699005 NFELVDSS(ph)PCK ddPTM_A459_MK2206_30min_R2 1 NFELVDSSPCK 11 0 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 NFELVDS(0.025)S(0.975)PCK 184.96 2.22E-05 3377500 41117 36974 38401 33859 36356 28524 41017 34436 29077 48350 TRUE FALSE 44264.94913 35137.92493 39681.27017 31092.61139 34928.48077 29609.50081 35631.41863 38936.90344 31606.0649 46772.34346 0.946391518 0.751254317 0.848391747 0.664764882 0.746776368 0.633055747 0.761805289 0.83247707 0.675742598 1 15.51336809 -10.43654527 13.88213665 0.999999998 0.759426587 0.387176845 0.089650972 0 0 0.085777746 0.020804159 3.66E-11 10.43654527 -0.240573412 NFETTQVCNES(ph)PHGDGYSSGVIK ddPTM_A459_MK2206_30min_R1 2 NFETTQVCNESPHGDGYSSGVIK 23 0 Q92628 Q92628 KIAA0232 Uncharacterized protein KIAA0232 1 NFETT(0.001)QVCNES(0.999)PHGDGYSSGVIK;NFET(0.004)T(0.01)QVCNES(0.985)PHGDGYSSGVIK 96.312 4.80E-05 17004600 2202.73 2270.6 2168.84 1767.53 2612.07 2108.6 2481.25 2377.87 1999.38 1913 TRUE FALSE 2015.376247 2122.783527 2021.625184 1903.665467 2508.025721 2227.98711 2315.73034 2357.080533 2207.222706 2149.996882 0.93738566 0.987342607 0.940292147 0.885427082 1.166525283 1.036274577 1.077085441 1.096318117 1.026616701 1 11.07011885 -6.250440089 24.99537679 1.070906927 0.941355517 0.632869988 0.048244475 462.9957894 1052136.562 0.013817065 0.017666414 5.62E-07 6.250440089 -0.129551409 NFETTQVCNES(ph)PHGDGYSSGVIK ddPTM_A459_MK2206_30min_R2 2 NFETTQVCNESPHGDGYSSGVIK 23 0 Q92628 Q92628 KIAA0232 Uncharacterized protein KIAA0232 1 NFET(0.001)T(0.001)QVCNES(0.997)PHGDGY(0.001)SSGVIK;NFETTQVCNES(0.991)PHGDGY(0.006)S(0.003)S(0.001)GVIK 98.929 0.00040095 8573200 39214 60072 59465 75461 62867 53692 71177 49853 44442 54884 TRUE FALSE 42216.25399 57088.91183 61447.53342 69295.59491 60398.5257 55735.28668 61831.3744 56368.95827 48307.48483 53093.13957 0.795135762 1.075259672 1.157353547 1.305170413 1.13759567 1.049764379 1.164583125 1.061699472 0.90986303 1 15.69623783 -8.08567315 4.967995326 0.958387696 1.107404871 0.169364001 0.12324413 0.397077429 16.36846937 0.091253339 0.033265188 8.21E-09 8.08567315 0.149017175 NFGEDMDDER ddPTM_A459_MK2206_30min_R1 2 NFGEDMDDER 10 0 P11940;E7ERJ7;P11940-2;A0A087WTT1;E7EQV3;Q9H361;H0YAR2;H0YBN4 P11940 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 0 ; 178.54 0.0013439 28184900 7213.7 7063.3 6837.5 5848.9 5309.4 5238.6 7017.4 6031.3 6457.9 7118.9 FALSE TRUE 6600.136934 6603.477886 6373.38955 6299.383291 5097.915355 5535.205005 6549.28205 5978.56898 7129.221815 8000.843077 0.824930182 0.825347757 0.796589745 0.787339938 0.637172271 0.691827718 0.818573991 0.747242375 0.891058823 1 12.96593631 -8.491752938 2.702345176 0.999608309 0.764386832 0.626008288 0.058347565 0.178827819 2.989253581 0.061957474 0.01672502 3.22E-09 8.491752938 -0.235221477 NFGEDMDDER ddPTM_A459_MK2206_30min_R2 4 NFGEDMDDER 10 0 P11940;E7ERJ7;P11940-2;A0A087WTT1;E7EQV3;Q9H361;H0YAR2;H0YBN4 P11940 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 0 ;;; 178.54 0.0013439 127435000 225976 222324 236242 245223 211415 208675 242507 207478 183796 231231 FALSE TRUE 243276.8963 211283.7134 244118.1904 225187.4965 203113.7848 216616.2734 210665.5396 234596.087 199782.2439 223685.9514 1.087582366 0.944555132 1.091343416 1.006712737 0.90803103 0.968394626 0.941791553 1.048774344 0.893137198 1 17.77111513 -6.008536212 24.85512825 0.961549567 1.034421172 0.299814392 0.055866338 495.2011248 1441900.977 0.015122139 0.021248447 9.81E-07 6.008536212 0.072871605 NFGEDMDDERLK ddPTM_A459_MK2206_30min_R1 1 NFGEDMDDERLK 12 1 P11940;E7ERJ7;P11940-2;A0A087WTT1;E7EQV3;Q9H361;H0YAR2;H0YBN4 P11940 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 0 98.368 0.043251 7016600 3277.5 3313.9 3728 3084.9 3635.9 3205.5 3294 3674.4 2277.5 1498.7 FALSE TRUE 2998.731414 3098.164508 3474.953747 3322.499533 3491.074404 3386.99264 3074.26327 3642.275108 2514.254275 1684.370271 1.780327916 1.839360716 2.06305811 1.972547005 2.072628842 2.010836156 1.825170703 2.162395746 1.492696896 1 10.7179936 -8.52390617 3.834509025 1.001622191 1.963260537 0.874555334 0.116465421 0.059739356 2.518974911 0.112587304 0.029571113 2.99E-09 8.52390617 0.961638346 NFGEDMDDERLK ddPTM_A459_MK2206_30min_R2 1 NFGEDMDDERLK 12 1 P11940;E7ERJ7;P11940-2;A0A087WTT1;E7EQV3;Q9H361;H0YAR2;H0YBN4 P11940 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 0 99.669 0.039887 4885900 17096 32896 24001 25750 34701 26995 25656 23680 27730 26084 FALSE TRUE 18404.8829 31262.43248 24801.18136 23646.14263 33338.46438 28022.31364 22287.33638 26775.05731 30141.90528 25232.88122 0.729400767 1.238956115 0.982891377 0.937116234 1.32123098 1.110547519 0.883265616 1.061117717 1.194548693 1 14.62301733 -4.74400433 24.97423272 1.077662245 0.729399697 0.391395535 0.131497248 1195.324224 1712108.951 0.033079117 0.991931149 1.80E-05 4.74400433 -0.348262548 NFHENCYR ddPTM_A459_MK2206_30min_R1 2 NFHENCYR 8 0 Q8WUP2-3;Q8WUP2 Q8WUP2-3 FBLIM1 Filamin-binding LIM protein 1 0 ; 109.48 0.017469 3133900 3444.8 3532 3510.7 3090.4 2912.3 2952.2 3090.7 3017.4 2383 2701.7 FALSE TRUE 3151.801671 3302.066158 3272.403465 3328.423143 2796.296924 3119.351013 2884.525042 2991.01919 2630.721378 3036.406993 1.038003693 1.08749129 1.077722279 1.096171611 0.920922963 1.027316503 0.949979713 0.985052135 0.866392873 1 11.56814946 -6.255531473 24.99221129 0.960567045 1.075955732 0.629808466 0.043758108 312.4735398 1321854.443 0.012598401 0.015841645 5.55E-07 6.255531473 0.115388687 NFITAEELR ddPTM_A459_MK2206_30min_R2 2 NFITAEELR 9 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 148.69 0.020855 18274000 75955 65367 70355 70953 68624 63203 81234 63464 50249 79274 FALSE TRUE 81770.1732 62120.96983 72700.60059 65155.91293 65929.47695 65608.23445 70567.87822 71758.9627 54619.56719 76687.29587 1.066280565 0.810055553 0.948013615 0.849631118 0.859718369 0.855529377 0.92020298 0.935734686 0.712237491 1 16.22669998 -4.748756796 24.93652853 0.876318744 1.066281026 0.35532651 0.07656812 636.5652499 1251538.839 0.017660597 0.312438722 1.78E-05 4.748756796 0.189962282 NFS(ph)CGSVEFDEADLESLR ddPTM_A459_MK2206_30min_R1 1 NFSCGSVEFDEADLESLR 18 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 NFS(0.995)CGS(0.005)VEFDEADLESLR 79.467 0.035909 0 402.99 381.95 343.4 425.95 467.17 352.22 459.26 457.13 419.55 288.56 TRUE FALSE 368.7135843 357.0849856 320.0909648 458.7567428 448.5616297 372.162392 428.6236034 453.1333606 463.1637239 324.3089913 1.136920635 1.101064094 0.986993803 1.414566833 1.383130415 1.147554961 1.321651927 1.397227252 1.428155667 1 8.341225212 -5.759913278 24.9999208 1.313601075 1.077599957 0.374331596 0.131683465 39.79224456 651832.8456 0.035545572 0.057604405 1.74E-06 5.759913278 -0.236001118 NFS(ph)CGSVEFDEADLESLR ddPTM_A459_MK2206_30min_R2 1 NFSCGSVEFDEADLESLR 18 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 NFS(0.998)CGS(0.002)VEFDEADLESLR 180.41 1.35E-09 2773600 8736.6 11147 9300.1 8772.9 8434.7 6447 10720 6415.1 8257 6261 TRUE FALSE 9405.480813 10593.45619 9610.160692 8056.126007 8103.511297 6692.345103 9312.451123 7253.575596 8975.178935 6056.704083 1.552904135 1.749046353 1.586698072 1.330117156 1.337940766 1.104948337 1.537544347 1.197611027 1.481858584 1 12.56431721 -1.522878745 0.151558332 1.050192525 3.395515558 0.48942743 0.159931412 59.01652377 0.587012745 0.558116638 30.4901758 0.03 1.522878745 2.345323033 NFS(ph)DNQLQEGK ddPTM_A459_MK2206_30min_R1 1 NFSDNQLQEGK 11 0 P37802;P37802-2;X6RJP6 P37802 TAGLN2 Transgelin-2 1 NFS(1)DNQLQEGK 130.61 0.0023606 12573000 3039 2853.6 2899.7 2472.3 2327.3 2398.9 2879.3 2556.1 2629.7 2529.4 TRUE FALSE 2780.517092 2667.830121 2702.876443 2662.716974 2234.598713 2534.723645 2687.227151 2533.752287 2903.066725 2842.761168 0.97810436 0.938464389 0.950792657 0.936665733 0.786066286 0.891641434 0.945287695 0.891299739 1.021213726 1 11.47307718 -10.34735778 6.412133362 1.000000002 0.922318411 0.117469179 0.059300203 1.97E-09 4.14E-10 0.059329133 0.014389428 4.49E-11 10.34735778 -0.077681591 NFS(ph)DNQLQEGK ddPTM_A459_MK2206_30min_R2 3 NFSDNQLQEGK 11 0 P37802;P37802-2;X6RJP6 P37802 TAGLN2 Transgelin-2 1 NFS(1)DNQLQEGK;NFS(1)DNQLQEGK;NFS(1)DNQLQEGK 161.82 0.00060176 26101400 124018 145307 137579 121859 121009 89391 143478 108050 94637 123996 TRUE FALSE 133512.9134 138091.2657 142165.8152 111902.7299 116257.5786 92792.83714 124639.1663 122172.506 102868.3552 119950.0207 1.1130712 1.151240032 1.185208759 0.932911301 0.969216829 0.773595841 1.039092495 1.018528428 0.857593476 1 16.87207388 -5.766043527 24.99672855 0.940552005 1.149980019 0.612755746 0.07587231 74.13717502 402506.923 0.02142387 0.033003717 1.71E-06 5.766043527 0.209428013 NFS(ph)IQVR ddPTM_A459_MK2206_30min_R1 4 NFSIQVR 7 0 I3L4X8;H3BM21;P05106-2;P05106-3;P05106 I3L4X8 ITGB3 Integrin beta;Integrin beta-3 1 NFS(1)IQVR;NFS(1)IQVR;NFS(1)IQVR;NFS(1)IQVR 114.72 0.0089724 53501600 6913 6870.4 7236.2 6054.1 7290.4 6197.2 8419.5 6768.4 3015.89 6065.7 TRUE FALSE 6325.013048 6423.135711 6745.026905 6520.387831 7000.00793 6548.080108 7857.850517 6709.224592 3329.402558 6817.16471 0.927806987 0.942200458 0.98941821 0.95646623 1.026821007 0.96052837 1.152656691 0.984166421 0.48838523 1 12.73495613 -8.053020623 24.94216434 0.741553172 0.99571259 0.371764791 0.129143524 305.5240023 143723.8093 0.080381694 0.030381923 8.85E-09 8.053020623 0.254159418 NFSCGS(ph)VEFDEADLESLR ddPTM_A459_MK2206_30min_R1 4 NFSCGSVEFDEADLESLR 18 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 NFS(0.009)CGS(0.991)VEFDEADLESLR;NFS(0.004)CGS(0.996)VEFDEADLESLR;NFS(0.054)CGS(0.946)VEFDEADLESLR;NFS(0.01)CGS(0.99)VEFDEADLESLR 293.72 4.56E-81 32358200 4222.87 4846.2 4389.58 3849.23 4320.8 3675.04 3591.74 3663.79 3445.33 3398.51 TRUE FALSE 3863.692731 4530.711499 4091.62754 4145.698362 4148.693387 3883.117589 3352.141578 3631.75787 3803.484383 3819.543076 1.011558884 1.186192015 1.07123482 1.085391179 1.08617531 1.016644533 0.87762895 0.950835688 0.995795651 1 11.89918435 -6.928965166 3.549741966 0.951037362 1.092445673 0.595950988 0.050993918 0.151139955 3.828306201 0.018683952 0.016009443 1.18E-07 6.928965166 0.141408311 NFSCGS(ph)VEFDEADLESLR ddPTM_A459_MK2206_30min_R2 3 NFSCGSVEFDEADLESLR 18 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 NFS(0.175)CGS(0.825)VEFDEADLESLR;NFS(0.047)CGS(0.953)VEFDEADLESLR;NFSCGS(1)VEFDEADLESLR 203.71 1.28E-14 5578800 15161.3 19901.3 15519.2 17862.5 17957.6 17124.8 18689 12354.1 15661.3 21293.5 TRUE FALSE 16322.06079 18913.03038 16036.60238 16403.07661 17252.49439 17776.49626 16235.11185 13968.82329 17023.49156 20598.69484 0.792383251 0.918166444 0.778525169 0.796316307 0.837552793 0.862991389 0.788162162 0.678141183 0.826435446 1 14.33026531 -7.291463389 23.6048087 0.796363121 0.83128941 0 0.083981393 1452.284323 1141773.47 0.033765264 0.022768554 5.11E-08 7.291463389 0.03492629 NFTKPQDGDVIAPLIT(ph)PQK ddPTM_A459_MK2206_30min_R2 2 NFTKPQDGDVIAPLITPQK 19 1 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 NFTKPQDGDVIAPLIT(1)PQK;NFTKPQDGDVIAPLIT(1)PQK 132.84 0.00033064 19158300 329990 200977 227254 201609 208192 141434 278370 221596 134956 254650 TRUE FALSE 355254.2881 190996.7744 234830.5349 185136.8998 200017.336 146816.37 241819.6846 250559.3581 146694.2289 246340.7914 1.442125302 0.775335556 0.953275069 0.751547881 0.811953777 0.59598887 0.981646942 1.017124921 0.595493049 1 17.91029602 -4.758325592 24.95673814 0.829957339 1.442126159 0.602654582 0.14877289 57.47331754 460563.1906 0.03600078 0.248676338 1.74E-05 4.758325592 0.61216882 NFTKPQDGDVIAPLIT(ph)PQKK ddPTM_A459_MK2206_30min_R1 2 NFTKPQDGDVIAPLITPQKK 20 2 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 NFTKPQDGDVIAPLIT(1)PQKK;NFTKPQDGDVIAPLIT(1)PQKK 104.81 0.0006613 87363000 16723.4 18246.1 19714.7 17498.7 12616.9 12206.8 15662 18502.6 17979.1 16372.5 TRUE FALSE 15300.98701 17058.27557 18376.52109 18846.45291 12114.34216 12897.93847 14617.21656 18340.83372 19848.09178 18400.84891 0.831537017 0.927037424 0.998677897 1.024216491 0.658357787 0.700942578 0.794377294 0.996738456 1.078650876 1 14.1674847 -7.883523926 5.349936879 1.038286314 0.851026128 0.349843234 0.111441773 0.270146661 11.41142899 0.07224144 0.03379616 1.31E-08 7.883523926 -0.187260186 NFTKPQDGDVIAPLIT(ph)PQKK ddPTM_A459_MK2206_30min_R2 2 NFTKPQDGDVIAPLITPQKK 20 2 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 NFTKPQDGDVIAPLIT(1)PQKK;NFTKPQDGDVIAPLIT(1)PQKK 79.489 0.005786 120458000 109194 117971 113889 100168 103220 70770 126722 93040 76046 120088 TRUE FALSE 117553.9766 112112.7317 117686.0024 91983.95398 99167.06416 73463.20194 110083.2492 105200.6475 82660.34362 116169.5384 1.011917394 0.965078567 1.013053887 0.791807863 0.853640856 0.632379219 0.947608562 0.905578596 0.711549213 1 16.82587229 -5.757979755 24.99959099 0.8277875 0.993522846 0.342278419 0.102593016 97.83684992 706964.934 0.027592391 0.045441996 1.75E-06 5.757979755 0.165735346 NFVFHTLS(ph)PVK ddPTM_A459_MK2206_30min_R1 2 NFVFHTLSPVK 11 0 E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4 E7ESG2 CLSPN Claspin 1 NFVFHT(0.023)LS(0.977)PVK;NFVFHT(0.014)LS(0.986)PVK 106.55 0.0073134 37545000 13283.4 14380.5 13986.7 11571.9 9637.3 9868.3 12884.2 10243.1 15616.5 17747.7 TRUE FALSE 12153.57708 13444.32684 13037.32177 12463.16974 9253.425934 10427.03462 12024.71853 10153.54566 17239.89106 19946.41906 0.609311227 0.674022078 0.65361716 0.624832442 0.463914144 0.522752209 0.602850992 0.509041028 0.86431008 1 14.28384215 -8.426751703 3.870010107 0.996256996 0.584729934 0.832234056 0.064001298 0.087876704 2.272883717 0.068306277 0.017988792 3.74E-09 8.426751703 -0.411527062 NFYES(ph)DDDQK ddPTM_A459_MK2206_30min_R2 1 NFYESDDDQK 10 0 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 NFYES(1)DDDQK 161.25 0.000105 0 43045 23514 28291 18961 17582 11662 27281 23362 15585 32170 TRUE FALSE 46340.5583 22346.32895 29234.20782 17411.82565 16891.64234 12105.80558 23698.97193 26415.49361 16940.55513 31120.29553 1.489078349 0.718062877 0.939393644 0.559500652 0.542785409 0.389000341 0.761527856 0.848818855 0.544357142 1 14.92556814 -2.61602768 1.250209696 0.663131217 200 0.60826951 0.187640468 237.8001336 2.036789825 0.054815858 134206.8209 0.002420875 2.61602768 199.3368688 NFYES(ph)DDDQKEK ddPTM_A459_MK2206_30min_R1 2 NFYESDDDQKEK 12 1 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 NFYES(1)DDDQKEK;NFY(0.115)ES(0.885)DDDQKEK 123.1 0.016048 43471000 4205.8 4993.5 5423.3 3918.3 2227 2069.2 3619.5 3686.9 5468.1 6213.8 TRUE FALSE 3848.074624 4668.422242 5055.181506 4220.088145 2138.293874 2186.356316 3378.049759 3654.665822 6036.528563 6983.612456 0.551014915 0.668482433 0.723863407 0.604284412 0.306187362 0.313069537 0.483710942 0.523320251 0.864384815 1 12.76975779 -8.364543434 3.138190145 0.993718489 0.51901829 0.630555184 0.127535044 0.181970746 3.257823323 0.142059257 0.038460262 4.32E-09 8.364543434 -0.474700199 NFYES(ph)DDDQKEK ddPTM_A459_MK2206_30min_R2 4 NFYESDDDQKEK 12 1 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK 176.43 0.00049153 210332000 336089 223110 306888 193443 201914 123736.7 314954 213052 143924 303814 TRUE FALSE 361820.2322 212030.6818 317119.4928 177638.0881 193985.8418 128445.5868 273600.1615 240898.6279 156442.2494 293900.5741 1.231097399 0.721436773 1.079002631 0.604415587 0.660039003 0.43703755 0.930927618 0.819660284 0.532296508 1 18.16496865 -5.761659061 24.99999708 0.70003308 0.981604737 0.311825276 0.201263005 7.308249658 831868.6776 0.05423951 0.086529551 1.73E-06 5.761659061 0.281571657 NFYQEHPDLAR ddPTM_A459_MK2206_30min_R2 2 NFYQEHPDLAR 11 0 P17844-2;P17844;J3KTA4;J3QR02;J3KRX8;J3QRQ7;J3KTQ4;X6RLV5 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ; 94.538 0.031072 45344000 99451 98905 98827 121570 114577 100336 113188 115418 97796 110676 FALSE TRUE 107065.045 93993.52152 102121.8429 111637.3421 110078.1313 104154.3568 98326.27964 130503.5289 106302.1193 107064.6512 1.000003679 0.877913676 0.953833424 1.042709623 1.028146359 0.972817411 0.918382291 1.218922655 0.992877837 1 16.70812271 -5.998687223 0.598659721 1.046154242 0.923830698 0.130253141 0.08078069 2.174340436 1.449648053 0.055059999 0.154564648 1.00E-06 5.998687223 -0.122323545 NFYVEHPEVAR ddPTM_A459_MK2206_30min_R1 2 NFYVEHPEVAR 11 0 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 ; 110.98 0.011098 9621500 5534.8 4509.3 5272.3 4716.6 7490.6 7057.4 6004.7 5863.8 4639.7 4010.1 FALSE TRUE 5064.036196 4215.74375 4914.430965 5079.873349 7192.23354 7456.983889 5604.137419 5812.533415 5122.013418 4506.901463 1.12361813 0.935397365 1.090423433 1.127132109 1.595826667 1.654569986 1.243456833 1.289696139 1.136482229 1 12.13792019 -6.033992688 13.46001661 1.348691921 1.050077773 0.297252872 0.18867923 3.055942588 1209.653107 0.058015187 0.075398909 9.25E-07 6.033992688 -0.298614148 NFYVEHPEVAR ddPTM_A459_MK2206_30min_R2 1 NFYVEHPEVAR 11 0 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 117.86 0.0073644 0 23272 25138 28733 31446 24022 22014 29371 21232 19795 27232 FALSE TRUE 25053.72221 23889.68347 29690.94388 28876.76121 23078.77558 22851.7582 25514.55242 24007.0953 21516.73332 26343.42207 0.951042812 0.906855738 1.127072398 1.096165909 0.876073561 0.867455949 0.968535992 0.911312708 0.816778217 1 14.68515515 -6.277248287 24.67981817 0.903388692 1.019809912 0.347578375 0.07615931 819.0149584 1278588.652 0.024973772 0.028416611 5.28E-07 6.277248287 0.11642122 NGARGPGSEGVWEPGS(ph)WPER ddPTM_A459_MK2206_30min_R2 1 NGARGPGSEGVWEPGSWPER 20 1 M0R0C0;Q9NQZ8 M0R0C0 ZNF71 Endothelial zinc finger protein induced by tumor necrosis factor alpha 1 NGARGPGSEGVWEPGS(1)WPER 50.029 0.041502 20795000 27784 25942 28252 21932 24498 13026 29107 21456 18122 28270 TRUE FALSE 29911.1644 24653.758 29193.90758 20140.08544 23536.08543 13521.71356 25285.21594 24260.37287 19698.2188 27347.55222 1.093741925 0.901497794 1.067514465 0.736449291 0.860628595 0.494439629 0.924587902 0.887113138 0.720291844 1 14.73912409 -5.7617239 24.99999957 0.793220843 1.008976056 0.336934433 0.139050344 8.574361274 753537.0912 0.037690629 0.060101968 1.73E-06 5.7617239 0.215755213 NGDECAYHHPIS(ph)PCK ddPTM_A459_MK2206_30min_R1 2 NGDECAYHHPISPCK 15 0 Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4;G3V5I6;G3V411;Q6PJT7-8;H0YJ51;Q6PJT7-9;Q6PJT7-2;H0YJA2;Q6PJT7-3;Q6PJT7-11;Q6PJT7-6 Q6PJT7-5;Q6PJT7-9 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 NGDECAYHHPIS(1)PCK;NGDECAYHHPIS(1)PCK 98.169 0.0059896 36754000 15172 18773.3 16494.2 16092.7 10635.6 9892.2 11585.9 12370.8 14252.5 16415.7 TRUE FALSE 13881.54173 17551.15476 15374.61966 17332.16254 10211.96153 10452.28782 10813.02575 12262.6434 15734.09838 18449.40085 0.75241152 0.951312994 0.833339781 0.939443112 0.553511825 0.566538063 0.586090889 0.664663503 0.852824355 1 14.17128634 -6.251736025 24.99124203 0.674408916 0.872441074 0.232621465 0.140937921 839.5117948 2162183.472 0.04092196 0.052162998 5.60E-07 6.251736025 0.198032158 NGDECAYHHPIS(ph)PCK ddPTM_A459_MK2206_30min_R2 4 NGDECAYHHPISPCK 15 0 Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4;G3V5I6;G3V411;Q6PJT7-8;H0YJ51;Q6PJT7-9;Q6PJT7-2;H0YJA2;Q6PJT7-3;Q6PJT7-11;Q6PJT7-6 Q6PJT7-5;Q6PJT7-9 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 NGDECAYHHPIS(1)PCK;NGDECAYHHPIS(1)PCK;NGDECAYHHPIS(1)PCK;NGDECAYHHPIS(1)PCK 100.07 0.0040796 95467000 386096 372733 376962 347133 352364 262842 444448 329482 275437.4 423586 TRUE FALSE 415655.8066 354223.6212 389529.7249 318771.1235 338528.4189 272844.6365 386091.4437 372546.4287 299394.4472 409764.4235 1.014377488 0.864456749 0.950618703 0.77793753 0.826153759 0.665857309 0.94222783 0.909172215 0.730650174 1 18.64443521 -3.93879124 0.954257151 0.835404791 1.629038021 0.195611371 0.099259013 13.64055481 3.030587541 0.031920524 16.41185886 0.000115135 3.93879124 0.793633231 NGIGPGSHSEFAAS(ph)IGSPK ddPTM_A459_MK2206_30min_R1 2 NGIGPGSHSEFAASIGSPK 19 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 NGIGPGSHS(0.001)EFAAS(0.566)IGS(0.433)PK;NGIGPGSHSEFAAS(0.546)IGS(0.454)PK 170.02 3.94E-09 18384000 7722.4 8429.6 8510.1 6882.9 5157.9 4449.3 5853.9 6852.3 7409.6 7215.4 TRUE FALSE 7065.569328 7880.831508 7932.458122 7413.022151 4952.449921 4701.215521 5463.397012 6792.391064 8179.854436 8109.298225 0.871292328 0.971826573 0.978192921 0.914138554 0.610712516 0.579731487 0.673720075 0.837605287 1.008700655 1 12.98536135 -6.06092726 11.64539335 0.761164909 0.944015775 0.204999287 0.139495642 1.512586296 287.2202103 0.04374826 0.056536007 8.69E-07 6.06092726 0.182850866 NGIGPGSHSEFAAS(ph)IGSPK ddPTM_A459_MK2206_30min_R2 1 NGIGPGSHSEFAASIGSPK 19 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 NGIGPGSHSEFAAS(0.602)IGS(0.398)PK 125.91 0.000251 12731000 141080 131350 146040 110530 126090 73516 146420 106220 97514 146580 TRUE FALSE 151881.1933 124827.35 150908.9007 101499.3454 121139.073 76313.7029 127194.8781 120103.3187 105995.5915 141797.1066 1.071116308 0.880323675 1.06425938 0.715806887 0.854312729 0.538189422 0.897020265 0.847008247 0.747515898 1 17.11346857 -5.761152926 24.99999999 0.789003787 0.99274219 0.35596036 0.125578187 8.143629068 710583.455 0.033409194 0.053539902 1.73E-06 5.761152926 0.203738403 NGIGPGSHSEFAAS(ph)IGSPKR ddPTM_A459_MK2206_30min_R2 1 NGIGPGSHSEFAASIGSPKR 20 1 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 NGIGPGSHSEFAAS(0.5)IGS(0.5)PKR 95.209 0.0026746 0 6639.4 7944.8 6695.9 6589.5 10293 7349.6 9432.6 5350.1 7460.5 7716.8 TRUE FALSE 7147.717569 7550.272785 6919.137964 6051.116771 9888.845102 7629.294178 8194.088289 6049.37644 8109.400805 7465.001448 0.957497144 1.011422816 0.926876975 0.810598205 1.324694331 1.022008399 1.097667341 0.810365073 1.086322737 1 12.86592682 -4.758851152 21.39681518 1.008189947 0.957496736 0.012146525 0.141189029 88.43865231 730051.6091 0.035207663 0.226976107 1.74E-05 4.758851152 -0.050693211 NGIGPGSHSEFAASIGS(ph)PK ddPTM_A459_MK2206_30min_R1 2 NGIGPGSHSEFAASIGSPK 19 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 NGIGPGSHSEFAAS(0.026)IGS(0.974)PK;NGIGPGSHSEFAAS(0.037)IGS(0.963)PK 135.69 0.00012294 81728000 11307.9 13720.4 14615.9 12080.8 7950.5 6003.6 8830.8 9821.6 12633.1 11665.1 TRUE FALSE 10346.10372 12827.19947 13623.81343 13011.26531 7633.81475 6343.518644 8241.713445 9735.730787 13946.35595 13110.26066 0.789160795 0.978409187 1.03917182 0.992449018 0.582277878 0.483859079 0.62864604 0.742603907 1.063774117 1 13.67840875 -6.245564591 24.6331471 0.717929603 0.958225268 0.219031672 0.178229272 925.6797444 1436390.253 0.05516665 0.070966933 5.68E-07 6.245564591 0.240295665 NGIGPGSHSEFAASIGS(ph)PK ddPTM_A459_MK2206_30min_R2 3 NGIGPGSHSEFAASIGSPK 19 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 NGIGPGSHSEFAAS(0.003)IGS(0.997)PK;NGIGPGSHSEFAAS(0.265)IGS(0.735)PK;NGIGPGSHSEFAAS(0.008)IGS(0.992)PK 177.38 5.12E-13 110178000 283192 241232 263187 213244 241051 166482 299346 223689 190663 308689 TRUE FALSE 304873.3973 229252.7697 271961.5232 195821.2831 231586.1266 172817.5892 260041.5106 252925.9203 207246.5231 298616.5032 1.020952941 0.767716343 0.910738423 0.655761758 0.775530234 0.578727523 0.870820962 0.846992439 0.694022336 1 18.18793437 -2.379391638 1.347456976 0.773553137 189.488073 0.23665521 0.120264214 1541.860619 4.781004959 0.032730383 897363.5692 0.004174537 2.379391638 188.7145199 NGIS(ph)PTNPTK ddPTM_A459_MK2206_30min_R1 1 NGISPTNPTK 10 0 Q9UJF2-2;Q9UJF2;A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8 Q9UJF2-2;A0A3B3ITG3 RASAL2;DAB2IP Ras GTPase-activating protein nGAP;Disabled homolog 2-interacting protein 1 NGIS(0.485)PT(0.485)NPT(0.03)K 85.973 0.035713 5527900 4287.3 4060.8 4525.2 3701.5 3611.2 2927.3 3168.7 3629.2 3847.1 3137.7 TRUE FALSE 3922.642621 3796.441182 4218.042032 3986.590171 3467.358257 3093.041196 2957.321805 3597.470287 4247.019812 3526.421964 1.112357699 1.076570308 1.196125159 1.130491533 0.983251095 0.877104676 0.838618247 1.020147425 1.204342491 1 11.7839894 -6.269201459 6.843720031 0.975000193 1.13024138 0.34183756 0.095405446 0.171138434 48.74029969 0.031713734 0.037870027 5.38E-07 6.269201459 0.155241186 NGLHRPVST(ph)DFAQYNSYGDVSGGVR ddPTM_A459_MK2206_30min_R1 1 NGLHRPVSTDFAQYNSYGDVSGGVR 25 1 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 NGLHRPVS(0.173)T(0.82)DFAQY(0.006)NSYGDVSGGVR 57.981 0.013681 6948900 432.43 485.38 539.72 445.48 729.82 549.39 526.84 478.89 541.19 435.95 TRUE FALSE 395.6495577 453.7816738 503.0853101 479.7909468 700.749724 580.495987 491.6954649 474.7031152 597.4486372 489.9587773 0.807516012 0.926162965 1.026791097 0.97924758 1.430221799 1.184785361 1.003544559 0.968863376 1.219385518 1 8.936516563 -5.268869741 1.408026676 1.123344126 0.806162268 0.365593211 0.133785508 0.695453276 2.17148392 0.043588161 0.241312348 5.38E-06 5.268869741 -0.317181858 NGLVNS(ph)EVHNEDGR ddPTM_A459_MK2206_30min_R1 1 NGLVNSEVHNEDGR 14 0 F2Z3N7;C9JZ87;Q9NUM4 F2Z3N7 TMEM106B Transmembrane protein 106B 1 NGLVNS(1)EVHNEDGR 98.077 0.010647 3695200 1927.1 1414.2 1204.3 1460.1 1794 1355.5 1528.7 2158.5 2024.8 2041.6 TRUE FALSE 1763.190025 1322.135323 1122.555471 1572.557155 1722.541181 1432.247239 1426.723212 2139.628462 2235.285206 2294.528821 0.768432285 0.576212123 0.489231367 0.685350796 0.750716733 0.624201023 0.621793546 0.93249143 0.974180488 1 11.16398221 -7.801747275 5.141767288 0.973496851 0.640761763 0.787570191 0.077184854 0.090869285 5.583386574 0.045591739 0.021956521 1.58E-08 7.801747275 -0.332735088 NGLVNS(ph)EVHNEDGR ddPTM_A459_MK2206_30min_R2 1 NGLVNSEVHNEDGR 14 0 F2Z3N7;C9JZ87;Q9NUM4 F2Z3N7 TMEM106B Transmembrane protein 106B 1 NGLVNS(1)EVHNEDGR 93.115 0.0098208 4652200 27960 21404 26436 18981 16917 25577 28123 15717 28178 27992 TRUE FALSE 30100.6391 20341.10848 27317.36305 17430.19158 16252.75358 26550.35066 24430.41632 17771.26586 30628.87151 27078.62333 1.111601529 0.75118695 1.008816538 0.643688247 0.600206051 0.980491155 0.902203041 0.656283949 1.131108887 1 14.72486677 -8.278295925 24.90622203 1.065554476 0.82833414 0.243216953 0.164835364 1271.697211 1878964.376 0.155301112 0.040541593 5.27E-09 8.278295925 -0.237220336 NGPSSS(ph)PFSSPASSR ddPTM_A459_MK2206_30min_R1 2 NGPSSSPFSSPASSR 15 0 Q96HA1;Q96HA1-2;Q96HA1-3;A6NF01;C9JFL1;A8CG34-2;A8CG34 Q96HA1;A8CG34-2 POM121;POM121B;POM121C Nuclear envelope pore membrane protein POM 121;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121C 1 NGPSS(0.004)S(0.984)PFS(0.012)SPASSR;NGPSS(0.083)S(0.917)PFSSPASSR 203.92 8.02E-06 13526500 4013.9 5585.1 5169.2 4614.3 4747.7 4560.3 4753.5 5779.6 5610.8 5320.9 TRUE FALSE 3672.496727 5221.508975 4818.329106 4969.694186 4558.589056 4818.500245 4436.402688 5729.069567 6194.062738 5980.093263 0.61412031 0.873148419 0.805728087 0.831039579 0.762293974 0.805756705 0.741861789 0.958023448 1.035780291 1 12.54595227 -7.874138278 4.542350397 1.011481363 0.784094446 0.706137461 0.065948132 0.115167189 3.991136474 0.036725503 0.016868435 1.34E-08 7.874138278 -0.227386917 NGPSSS(ph)PFSSPASSR ddPTM_A459_MK2206_30min_R2 2 NGPSSSPFSSPASSR 15 0 Q96HA1;Q96HA1-2;Q96HA1-3;A6NF01;C9JFL1;A8CG34-2;A8CG34 Q96HA1;A8CG34-2 POM121;POM121B;POM121C Nuclear envelope pore membrane protein POM 121;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121C 1 NGPS(0.044)S(0.237)S(0.719)PFSSPASSR;NGPSS(0.081)S(0.919)PFSSPASSR 276.14 5.37E-46 12854000 30556 33627 35269 36681.3 33366.6 34055 55438 34531 45869 47920 TRUE FALSE 32895.39085 31957.13208 36444.85086 33684.32045 32056.45963 35350.98689 48158.92401 39044.32026 49858.60271 46356.37432 0.709619579 0.689379455 0.786188553 0.726638374 0.69152215 0.762591713 1.038884613 0.842264324 1.075550093 1 15.50048011 -7.171203292 5.126550457 0.975470477 0.723773485 0.806836354 0.06269911 0.095299805 4.096570685 0.023174526 0.017755415 6.74E-08 7.171203292 -0.251696992 NGQYQAS(ph)DAAGLGLDR ddPTM_A459_MK2206_30min_R1 1 NGQYQASDAAGLGLDR 16 0 Q8TDX6-3;Q8TDX6 Q8TDX6-3 CSGALNACT1 Chondroitin sulfate N-acetylgalactosaminyltransferase 1 1 NGQY(0.013)QAS(0.987)DAAGLGLDR 70.197 0.043213 9442100 4479.6 4930 5271.5 4653 3396.8 2407.1 3530.5 4048 4390.5 5302.3 TRUE FALSE 4098.586497 4609.056104 4913.685267 5011.374866 3261.498263 2543.387922 3294.986787 4012.608763 4846.908187 5959.188954 0.687775892 0.773436811 0.824556044 0.840949147 0.54730573 0.42680102 0.552925375 0.673348134 0.813350311 1 12.54090028 -8.540897877 2.590921197 0.998518026 0.664950321 0.419506201 0.123346518 0.324714628 5.274696315 0.138708255 0.037505584 2.88E-09 8.540897877 -0.333567705 NGQYQAS(ph)DAAGLGLDR ddPTM_A459_MK2206_30min_R2 1 NGQYQASDAAGLGLDR 16 0 Q8TDX6-3;Q8TDX6 Q8TDX6-3 CSGALNACT1 Chondroitin sulfate N-acetylgalactosaminyltransferase 1 1 NGQY(0.001)QAS(0.999)DAAGLGLDR 70.529 0.042341 49121000 111270 111620 120810 90617 108020 73607 128120 84963 86976 102520 TRUE FALSE 119788.9168 106077.1131 124837.7451 83213.30123 103778.592 76408.16596 111297.6901 96067.95582 94541.01526 99174.7808 1.207856632 1.069597656 1.258765022 0.839057072 1.046421189 0.770439474 1.122237823 0.968673236 0.953276776 1 16.59768568 -5.756646119 24.99999919 0.95867035 1.167825562 0.49323545 0.102738164 101.4960475 529360.5639 0.026704675 0.044407616 1.75E-06 5.756646119 0.209155212 NGS(ph)EADIDEGLYSR ddPTM_A459_MK2206_30min_R1 3 NGSEADIDEGLYSR 14 0 P22314;Q5JRR9;P22314-2;Q5JRS2;Q5JRS0;Q5JRS1;Q5JRS3 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 NGS(0.999)EADIDEGLYS(0.001)R;NGS(1)EADIDEGLYSR;NGS(0.93)EADIDEGLY(0.047)S(0.023)R 159.64 0.00029672 25401600 4020.8 4803.5 4753.5 3951.25 3280.4 2721.2 3497.31 3517.44 3801.46 4060.4 TRUE FALSE 3678.809846 4490.791277 4430.845664 4255.57596 3149.734722 2875.271992 3264.010831 3486.687393 4196.635371 4563.433006 0.806149634 0.98408178 0.970945702 0.932538278 0.690211671 0.630067756 0.715253369 0.764049212 0.919622434 1 12.15590384 -6.244666192 23.66189533 0.763349188 0.931155301 0.248017496 0.112189346 484.5551471 683559.3597 0.033359423 0.042919838 5.69E-07 6.244666192 0.167806113 NGS(ph)EADIDEGLYSR ddPTM_A459_MK2206_30min_R2 4 NGSEADIDEGLYSR 14 0 P22314;Q5JRR9;P22314-2;Q5JRS2;Q5JRS0;Q5JRS1;Q5JRS3 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 NGS(0.952)EADIDEGLY(0.016)S(0.032)R;NGS(1)EADIDEGLYSR;NGS(0.987)EADIDEGLY(0.008)S(0.006)R;NGS(1)EADIDEGLYSR 199.65 6.93E-05 39163100 101746 102488 102262 95264 86823 68178 96218 66576 64796 96115 TRUE FALSE 109535.752 97398.59495 105671.364 87480.62647 83413.89277 70772.56156 83584.46102 75277.71179 70431.83896 92978.77542 1.178072646 1.04753579 1.136510602 0.940866623 0.897128322 0.761169001 0.898962808 0.809622534 0.75750448 1 16.5046138 -5.974587628 1.928700086 0.838659161 1.120367388 0.712649639 0.075083509 0.167945144 1.260047977 0.022959457 0.03767917 1.06E-06 5.974587628 0.281708228 NGS(ph)PPPGAPSSR ddPTM_A459_MK2206_30min_R1 3 NGSPPPGAPSSR 12 0 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 NGS(0.997)PPPGAPS(0.001)S(0.001)R;NGS(1)PPPGAPSSR;NGS(1)PPPGAPSSR 135.86 0.0014554 25615200 8156 9980.8 9915.3 8128.5 7296.3 5728 7181.2 7795.3 8091.3 7551 TRUE FALSE 7462.289371 9331.048106 9242.277062 8754.558478 7005.672921 6052.31441 6702.155251 7727.146514 8932.41959 8486.474887 0.879315555 1.09951991 1.089059614 1.031589511 0.825510358 0.713171781 0.789745488 0.910524878 1.052547696 1 13.0509497 -6.252173992 23.64113179 0.864397138 1.034788122 0.285435703 0.108253522 378.2983646 965246.2205 0.033945815 0.043145063 5.60E-07 6.252173992 0.170390984 NGS(ph)PTPAGSLGGGAVATAGGPGSR ddPTM_A459_MK2206_30min_R1 1 NGSPTPAGSLGGGAVATAGGPGSR 24 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 NGS(0.957)PT(0.043)PAGSLGGGAVATAGGPGSR 218.87 2.68E-34 16308000 2157.9 2780.5 2815.2 2403 1790.9 1608.6 2050.4 1778.2 2290.6 2914.3 TRUE FALSE 1974.359273 2599.488945 2624.112068 2588.079476 1719.564661 1699.677542 1913.621557 1762.653385 2528.716067 3275.345486 0.602794204 0.793653358 0.801171076 0.790169919 0.525002528 0.518930766 0.584250292 0.538158003 0.772045599 1 11.67743138 -8.560552922 7.136868971 0.999993952 0.64939084 0.509227259 0.10721708 0.431227611 79.79319079 0.117808479 0.030475088 2.75E-09 8.560552922 -0.350603112 NGSLDS(ph)PGKQDTEEDEEEDEKDK ddPTM_A459_MK2206_30min_R2 3 NGSLDSPGKQDTEEDEEEDEKDK 23 2 A0A0A0MSS4;A0A0A0MSU9;Q9Y266 A0A0A0MSS4 NUDC Nuclear migration protein nudC 1 NGS(0.056)LDS(0.893)PGKQDT(0.051)EEDEEEDEKDK;NGS(0.004)LDS(0.995)PGKQDT(0.001)EEDEEEDEKDK;NGS(0.009)LDS(0.799)PGKQDT(0.193)EEDEEEDEKDK 89.507 7.38E-05 43859000 370084 163828 245299 110141 122874 52945.6 248782 166792 83146 293949 TRUE FALSE 398417.9156 155692.5397 253477.1462 101142.128 118049.3494 54960.48191 216116.6246 188592.2871 90377.88879 284357.4682 1.401116412 0.547524005 0.891403162 0.355686554 0.415144185 0.193279544 0.760017403 0.663222557 0.317831951 1 18.11734617 -3.029330168 11.78122397 0.623943132 0.803642677 0 0.351793218 0 0 0.0790765 0 0.000934695 3.029330168 0.179699545 NGSLDS(ph)PGKQDTEEDEEEDEKDKGK ddPTM_A459_MK2206_30min_R1 1 NGSLDSPGKQDTEEDEEEDEKDKGK 25 3 A0A0A0MSS4;A0A0A0MSU9;Q9Y266 A0A0A0MSS4 NUDC Nuclear migration protein nudC 1 NGS(0.014)LDS(0.87)PGKQDT(0.117)EEDEEEDEKDKGK 55.177 0.0093762 59801000 4071.1 6768.4 6841.1 6115.8 1273.6 805.91 2075.9 2803.7 5350.6 4011.9 TRUE FALSE 3724.831567 6327.77593 6376.745192 6586.839976 1222.869815 851.5399277 1937.420499 2779.187546 5906.814017 4508.92446 0.826102012 1.403389209 1.414249728 1.460845049 0.271210979 0.188856552 0.42968573 0.61637483 1.310027274 1 12.13856762 -6.254126386 24.95512226 0.584169157 1.295099803 0.435436106 0.353872352 511.3618501 1744988.557 0.110085565 0.139194345 5.57E-07 6.254126386 0.710930646 NGSPSLGRDSPDT(ph)MLASPQEEGEGPSSTTESSER ddPTM_A459_MK2206_30min_R2 1 NGSPSLGRDSPDTMLASPQEEGEGPSSTTESSER 34 1 Q8IWE5;Q5VVD7 Q8IWE5 PLEKHM2 Pleckstrin homology domain-containing family M member 2 1 NGS(0.003)PS(0.022)LGRDS(0.402)PDT(0.571)MLAS(0.001)PQEEGEGPSSTTESSER 80.593 5.15E-06 3024900 2822 4567.5 3372.7 2639.2 3442.8 3896.7 3214.7 2491.9 4657.7 4591.1 TRUE FALSE 3038.05449 4340.684592 3485.144135 2423.568918 3307.618373 4044.991649 2792.606028 2817.599886 5062.818327 4441.292783 0.684047334 0.977347093 0.78471389 0.545689968 0.744742248 0.910768969 0.628782241 0.634409849 1.139942484 1 12.11676397 -8.265699941 24.98519369 1.069971275 0.744118305 0.519739589 0.127251391 318.4893449 1867678.102 0.112744527 0.033176454 5.42E-09 8.265699941 -0.32585297 NGSPT(ph)PAGSLGGGAVATAGGPGSR ddPTM_A459_MK2206_30min_R1 1 NGSPTPAGSLGGGAVATAGGPGSR 24 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 NGS(0.302)PT(0.698)PAGSLGGGAVATAGGPGSR 282.87 4.52E-86 16687000 1137.1 1553.4 1185 1038.6 965.39 733.92 1082.9 866.04 1033.4 1087.6 TRUE FALSE 1040.383674 1452.273378 1104.565502 1118.593152 926.9364721 775.4739162 1010.661717 858.4683036 1140.825628 1222.340099 0.851140918 1.188109086 0.903648258 0.91512432 0.758329431 0.634417473 0.826825298 0.702315423 0.933312774 1 10.25543004 -5.858099397 2.084348084 0.789047289 1.015054344 0.257742373 0.128817387 0.344214398 3.049407304 0.038125162 0.06769891 1.39E-06 5.858099397 0.226007055 NGSTAVAESVAS(ph)PQK ddPTM_A459_MK2206_30min_R1 4 NGSTAVAESVASPQK 15 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 NGSTAVAESVAS(1)PQK;NGSTAVAESVAS(1)PQK;NGSTAVAES(0.001)VAS(0.999)PQK;NGSTAVAES(0.001)VAS(0.999)PQK 185.25 2.13E-05 33770200 14678.1 16030.2 16062.8 13737.5 11192.2 8431.8 11782.1 12631.7 14571.4 13571.5 TRUE FALSE 13429.65052 14986.63107 14972.50189 14795.56463 10746.39097 8909.201229 10996.13761 12521.26238 16086.14917 15252.83988 0.880468858 0.982546935 0.981620604 0.970020321 0.704550173 0.584101144 0.720923952 0.820913514 1.054633059 1 13.89679026 -6.244939908 24.09272345 0.789065208 0.957724146 0.194735676 0.133092889 751.3703592 1097158.416 0.041531692 0.053439651 5.69E-07 6.244939908 0.168658938 NGSTAVAESVAS(ph)PQK ddPTM_A459_MK2206_30min_R2 2 NGSTAVAESVASPQK 15 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 NGSTAVAES(0.001)VAS(0.999)PQK;NGSTAVAESVAS(1)PQK 148.52 0.0003031 66563000 104176 102056 109227 95166 95463 65224 116128 84688 76781 117346 TRUE FALSE 112151.7947 96988.04744 112868.5737 87390.63338 91714.64296 67706.14502 100880.2541 95757.01238 83459.27259 113517.0096 0.987973477 0.854392199 0.994287764 0.769846155 0.807937447 0.596440527 0.88867963 0.8435477 0.735213805 1 16.79254896 -5.769777913 24.98215082 0.794233365 0.936435256 0.265595308 0.104792151 224.985918 674056.5819 0.028531357 0.043116227 1.70E-06 5.769777913 0.142201891 NGSVVSLQS(ph)PGSR ddPTM_A459_MK2206_30min_R1 2 NGSVVSLQSPGSR 13 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 NGSVVSLQS(0.853)PGS(0.147)R;NGS(0.002)VVS(0.017)LQS(0.972)PGS(0.01)R 95.755 0.014739 9089900 3456.6 2860.6 3832.8 3064.8 3051.6 2793.2 3082.4 3935.2 2716.1 2768.7 TRUE FALSE 3162.598019 2674.37442 3572.640215 3300.851427 2930.04831 2951.34857 2876.77872 3900.794961 2998.448315 3111.707459 1.016354545 0.859455606 1.148128564 1.060784624 0.94162075 0.94846595 0.924501663 1.25358666 0.963602252 1 11.60349072 NGTSGSDS(ph)PGQAVEAEEIVK ddPTM_A459_MK2206_30min_R1 1 NGTSGSDSPGQAVEAEEIVK 20 0 Q05D32 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 NGTSGS(0.015)DS(0.985)PGQAVEAEEIVK 166.59 3.33E-09 4780100 913.57 879.19 704.49 808.14 735.24 755.54 681.54 603.89 666.25 390.57 TRUE FALSE 835.8660742 821.9545712 656.6711816 870.3830828 705.9538339 798.3180219 636.0757101 598.6102534 735.5090717 438.9567603 1.904210505 1.872518311 1.495981475 1.982844694 1.6082537 1.818671209 1.44906234 1.363711207 1.675584336 1 8.777935023 -11.28429633 0.128701491 2.34E-10 2.103039559 0.662097398 0.16579562 29.44691974 0.584636972 10.71411956 1.641622568 5.20E-12 11.28429633 2.103039558 NGTSGSDS(ph)PGQAVEAEEIVK ddPTM_A459_MK2206_30min_R2 1 NGTSGSDSPGQAVEAEEIVK 20 0 Q05D32 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 NGTSGS(0.044)DS(0.956)PGQAVEAEEIVK 235.21 9.80E-25 3112500 14405 19569 16163 16644 19090 13376 21269 15776 13953 20592 TRUE FALSE 15507.85788 18597.23192 16701.86635 15284.13196 18340.43068 13885.03305 18476.35475 17837.97737 15166.60672 19920.08473 0.77850361 0.933592009 0.83844354 0.767272437 0.920700435 0.697036847 0.927523904 0.895476983 0.761372601 1 14.28193616 -11.56726847 2.630069799 1.210144498 0.839406272 0.28190672 0.078523878 52352526.32 30745015.28 65965084.41 0.018844241 2.71E-12 11.56726847 -0.370738226 NGTSSTCQDS(ph)PEKTTLAAK ddPTM_A459_MK2206_30min_R2 1 NGTSSTCQDSPEKTTLAAK 19 1 Q9BX63;Q9BX63-2 Q9BX63 BRIP1 Fanconi anemia group J protein 1 NGT(0.006)S(0.019)S(0.064)T(0.051)CQDS(0.618)PEKT(0.101)T(0.141)LAAK 58.952 0.024515 7901200 22694 20075 22284 22232 26487 12686 26928 19990 19438 23739 TRUE FALSE 24431.47009 19078.10469 23026.93744 20415.57448 25446.98729 13168.77462 23392.32125 22602.76164 21128.6821 22964.39837 1.063884614 0.830768757 1.002723305 0.889009769 1.108105986 0.573443049 1.018634186 0.984252288 0.920062514 1 14.48711137 NGVAAEVS(ph)PAKEENPR ddPTM_A459_MK2206_30min_R1 2 NGVAAEVSPAKEENPR 16 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 NGVAAEVS(1)PAKEENPR;NGVAAEVS(1)PAKEENPR 179.66 5.00E-06 13755500 4358.5 4924.5 4666.2 4213.8 2872.9 2944.5 3602.4 3422.2 4693.9 4510.8 TRUE FALSE 3987.786688 4603.914155 4349.471345 4538.347606 2758.46631 3111.215045 3362.090469 3392.280066 5181.847702 5069.631959 0.786602799 0.908135776 0.857946174 0.895202579 0.544115694 0.613696432 0.663182356 0.669137344 1.02213489 1 12.3076653 NGVAAEVS(ph)PAKEENPR ddPTM_A459_MK2206_30min_R2 3 NGVAAEVSPAKEENPR 16 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 NGVAAEVS(1)PAKEENPR;NGVAAEVS(1)PAKEENPR;NGVAAEVS(1)PAKEENPR 98.188 0.0039706 90497300 241630 198288 213114 183291 223164 127260 244909 189445 144384 254963 TRUE FALSE 260129.3786 188441.3063 220219.1144 168315.539 214401.4601 132102.9685 212752.1541 214206.112 156942.2593 246643.5782 1.054677282 0.764022756 0.892863767 0.682424169 0.869276474 0.535602708 0.862589473 0.868484448 0.636311963 1 17.9120682 -2.74722485 1.587590092 0.778710106 182.8672344 0.251711035 0.132874049 1197.521246 5.985486366 0.034410755 791628.3861 0.001789679 2.74722485 182.0885243 NGYGFVEFEDS(ph)RDADDAVYELNGK ddPTM_A459_MK2206_30min_R1 1 NGYGFVEFEDSRDADDAVYELNGK 24 1 Q13247-3;Q13247;A0A590UJK4;A0A590UK01;A0A590UJP7;A0A590UK80;Q13247-2 Q13247-3 SRSF6 Serine/arginine-rich splicing factor 6 1 NGY(0.011)GFVEFEDS(0.87)RDADDAVY(0.119)ELNGK 49.176 0.025752 11874000 1020.9 926.33 1018.6 848.82 729.75 661.09 799.28 1002.4 825.99 794.22 TRUE FALSE 934.067094 866.0257486 949.46027 914.1962635 700.6825122 698.5203445 745.9614896 993.6361225 911.8546163 892.6139697 1.046440147 0.97021308 1.063685201 1.024178754 0.784978206 0.782555918 0.835704476 1.113175635 1.021555395 1 9.801892575 -6.084885732 24.99999327 0.916113421 1.024934185 0.196127742 0.101708743 150.513981 44325.71664 0.033755474 0.043578153 8.22E-07 6.084885732 0.108820763 NHAGS(ph)PGCEESDAGK ddPTM_A459_MK2206_30min_R1 2 NHAGSPGCEESDAGK 15 0 P42575 P42575 CASP2 Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 1 NHAGS(1)PGCEESDAGK;NHAGS(1)PGCEESDAGK 88.176 0.011838 23159000 6242.4 7471.4 8770.8 6918 6001.6 4988.5 6524.2 6589.3 6286.5 8675.1 TRUE FALSE 5711.4511 6985.010502 8175.462533 7450.825559 5762.543563 5270.944559 6088.982522 6531.690445 6940.004171 9749.836882 0.585799657 0.716423319 0.838523006 0.764200022 0.591039997 0.540618743 0.624521476 0.669928177 0.711807208 1 13.25116237 -8.850978428 2.460813839 0.999974792 0.669264035 0.580244429 0.084586502 1.955047655 13.70451519 0.092563379 0.024994571 1.41E-09 8.850978428 -0.330710757 NHAGS(ph)PGCEESDAGK ddPTM_A459_MK2206_30min_R2 2 NHAGSPGCEESDAGK 15 0 P42575 P42575 CASP2 Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 1 NHAGS(0.998)PGCEES(0.002)DAGK;NHAGS(1)PGCEESDAGK 178.52 1.98E-05 6270300 19879.6 29116 19174.7 28925 34338 22799 36490 24821 15809.8 31131 TRUE FALSE 21401.59746 27670.14178 19813.97493 26561.73497 32989.71759 23666.63192 31698.81917 28065.18992 17184.90783 30115.19802 0.710657703 0.91880989 0.657939387 0.882004327 1.095450794 0.785870042 1.052585447 0.93192779 0.570639045 1 14.87820412 -4.752601202 24.56620395 0.87785806 0.710657305 0.091279001 0.157677596 727.9171183 2023096.585 0.038749793 0.448316969 1.77E-05 4.752601202 -0.167200755 NHDDWSHDYDNRR ddPTM_A459_MK2206_30min_R1 1 NHDDWSHDYDNRR 13 1 G3V1T9;J3KPD3;Q9Y580 G3V1T9 RBM7 RNA-binding protein 7 0 62.924 0.027746 3289900 648.45 584.49 551.22 909.07 636.4 510.93 769.38 557.83 422.74 394.76 FALSE TRUE 593.2959224 546.4395948 513.8047222 979.0867289 611.0508404 539.8584151 718.056064 552.9529511 466.6853358 443.6658491 1.337258488 1.231646736 1.158089412 2.206811119 1.37727716 1.216813095 1.618461429 1.246327506 1.051884739 1 8.793329697 -8.075925877 3.178010484 1.02637376 1.447616728 0.260173201 0.28494814 0.386594666 7.235092779 0.231226177 0.078704992 8.40E-09 8.075925877 0.421242968 NHDDWSHDYDNRR ddPTM_A459_MK2206_30min_R2 2 NHDDWSHDYDNRR 13 1 G3V1T9;J3KPD3;Q9Y580 G3V1T9 RBM7 RNA-binding protein 7 0 ; 59.975 0.031232 5919100 1857.06 8710.6 0 2374.3 5293.8 5095.9 1905.18 1784.67 1999.55 1061.4 FALSE TRUE 1999.237941 8278.04427 0 2180.312095 5085.938813 5289.828045 1655.027577 2017.932497 2173.467245 1026.766605 1.947120146 8.062245335 0 2.123473908 4.953354334 5.151928413 1.611882944 1.965327356 2.116807495 1 10.00389256 -7.290031729 23.84449304 1.753947641 3.720611004 0.187992307 2.066933661 772.071345 643861.8948 0.873500113 0.589072354 5.13E-08 7.290031729 1.966663363 NHDEESLECLCR ddPTM_A459_MK2206_30min_R2 2 NHDEESLECLCR 12 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4;Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73;C9JF13 A0A0A0MSA7;Q04637-9 EIF4G3;EIF4G1 Eukaryotic translation initiation factor 4 gamma 3;Eukaryotic translation initiation factor 4 gamma 1 0 ; 227.48 1.18E-09 10164500 25706.7 38349 27282 43304 40869 38947 38203 30980.4 20238.4 32498 FALSE TRUE 27674.82472 36444.64442 28191.56826 39765.92468 39264.27771 40429.15538 33186.90021 35029.64465 21998.69945 31437.59292 0.880309914 1.159269557 0.896747036 1.26491633 1.248959416 1.28601307 1.055643805 1.114259757 0.699757755 1 14.94020314 -8.2360184 22.54563773 0.849879129 1.12099695 0.330982056 0.14946227 214.4507497 190195.6085 0.101489191 0.03830342 5.81E-09 8.2360184 0.271117821 NHEGDEDDSHVR ddPTM_A459_MK2206_30min_R1 2 NHEGDEDDSHVR 12 0 Q9UNE7;H3BTA3;H3BS86;Q9UNE7-2;H3BUD0 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 0 ; 139.78 0.00063703 887200 943.92 1129.4 761.58 1001.43 750.39 416.864 746.24 845.44 103.7 643.5 FALSE TRUE 863.6346473 1055.875855 709.8860715 1078.560312 720.5003773 440.4664794 696.4596912 838.0484072 114.4799861 723.2216382 1.194149347 1.459961648 0.981560885 1.491327492 0.996237307 0.609033879 0.962996203 1.158771202 0.158291705 1 9.498294032 -6.500903029 6.826687162 0.79890016 1.270847795 0.40720989 0.285902329 0.184248165 36.0750066 0.087450227 0.095255633 3.16E-07 6.500903029 0.471947635 NHEGDEDDSHVR ddPTM_A459_MK2206_30min_R2 2 NHEGDEDDSHVR 12 0 Q9UNE7;H3BTA3;H3BS86;Q9UNE7-2;H3BUD0 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 0 ; 208.08 4.82E-06 12388000 26017.3 52309 24728 57592 56704 45324 51479 39241 23953 84147 FALSE TRUE 28009.20449 49711.41112 25552.41918 52886.54937 54477.51605 47048.83658 44719.74546 44369.93343 26036.38864 81401.29028 0.344087967 0.610695616 0.313906808 0.64970161 0.669246346 0.577986374 0.549373914 0.545076537 0.319852284 1 16.31276404 -11.13541184 2.825668228 1.038622406 0.51928734 0.566278244 0.128653509 55658432.68 54805793.17 15881224.49 0.03138506 7.32E-12 11.13541184 -0.519335066 NHLLQFALES(ph)PAK ddPTM_A459_MK2206_30min_R1 1 NHLLQFALESPAK 13 0 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 NHLLQFALES(1)PAK 143.88 0.00046243 15492000 6553.1 7882.5 8816.4 6328.1 3933.9 3870 5756.7 4737.3 7057.1 9182.3 TRUE FALSE 5995.724433 7369.347817 8217.967332 6815.491358 3777.204433 4089.116056 5372.681047 4695.882286 7790.710799 10319.87265 0.580988219 0.714092903 0.796324491 0.660423979 0.366012698 0.396237066 0.520615053 0.455032969 0.754923153 1 13.33313755 -8.545848515 4.487854386 0.999694441 0.565087832 0.530787486 0.129457043 0.164413646 12.02178065 0.144276989 0.03764519 2.85E-09 8.545848515 -0.434606609 NHLLQFALES(ph)PAK ddPTM_A459_MK2206_30min_R2 2 NHLLQFALESPAK 13 0 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 NHLLQFALES(1)PAK;NHLLQFALES(1)PAK 115.58 0.00263 10247000 98196 79123 74994 92041 86825 60389 112219 80230 52945 125792 TRUE FALSE 105713.9613 75193.86688 77494.26253 84520.95588 83415.81424 62687.14571 97484.5105 90716.33647 57550.0604 121687.4173 0.868733708 0.617926393 0.63683053 0.694574326 0.685492519 0.515148954 0.801105921 0.745486579 0.472933535 1 16.89282047 -11.04399625 2.87812954 1.013764651 0.670919488 0.428782891 0.113949277 55651870.94 60247471.34 5994231.324 0.027423712 9.04E-12 11.04399625 -0.342845162 NHLS(ph)PQQGGATPQVPSPCCR ddPTM_A459_MK2206_30min_R1 2 NHLSPQQGGATPQVPSPCCR 20 0 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 NHLS(1)PQQGGATPQVPSPCCR;NHLS(0.899)PQQGGAT(0.101)PQVPSPCCR 249.49 6.30E-38 21131000 3535.77 3433.36 3710.7 3487.5 3435.68 3118.09 3303.43 3517.3 2842.11 3069.06 TRUE FALSE 3235.034194 3209.84764 3458.828023 3756.107854 3298.82959 3294.633561 3083.064212 3486.548617 3137.557505 3449.278323 0.93788726 0.930585282 1.002768608 1.088954704 0.956382548 0.955166053 0.893828773 1.010805244 0.909627235 1 11.75207883 -6.489244855 24.99848372 0.95135909 0.991204912 0.100468924 0.05212659 1494.669163 1110918.031 0.016865169 0.019111527 3.24E-07 6.489244855 0.039845822 NHLS(ph)PQQGGATPQVPSPCCR ddPTM_A459_MK2206_30min_R2 3 NHLSPQQGGATPQVPSPCCR 20 0 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 NHLS(1)PQQGGATPQVPSPCCR;NHLS(0.98)PQQGGAT(0.02)PQVPSPCCR;NHLS(1)PQQGGATPQVPSPCCR 254.54 1.72E-38 42098800 66446.1 93167 58202.3 82586 82722 79963 90137 64542.4 56781 91961 TRUE FALSE 71533.2645 88540.46226 60142.73563 75838.45962 79473.91864 83006.048 78301.90363 72978.31329 61719.70874 88960.3201 0.804103048 0.995280392 0.676062491 0.852497603 0.893363677 0.933068225 0.880189095 0.820346793 0.693789194 1 16.44087436 -2.344581842 22.32446545 0.852691953 0.242501927 0 0.10524112 0 0 0.023333675 0 0.004522912 2.344581842 -0.610190025 NHLSPQQGGAT(ph)PQVPSPCCR ddPTM_A459_MK2206_30min_R2 1 NHLSPQQGGATPQVPSPCCR 20 0 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 NHLS(0.09)PQQGGAT(0.91)PQVPSPCCR 241.98 7.08E-30 7785800 14122 23867 17618 24659 25379 24538 25560 18444 16773 27280 TRUE FALSE 15203.19118 22681.79949 18205.37533 22644.28082 24382.49294 25471.81078 22203.9413 20854.69413 18231.88522 26389.85583 0.576099819 0.859489329 0.689862629 0.858067621 0.923934299 0.965212199 0.841381682 0.790254189 0.690867178 1 14.68769585 -4.162411874 1.088499011 0.853565796 1.22E-19 0.384608151 0.099765062 6.676815335 2.522643419 0.03175919 9.103192594 6.88E-05 4.162411874 -0.853565796 NHPMT(ph)PEAVK ddPTM_A459_MK2206_30min_R2 1 NHPMTPEAVK 10 0 E7ER27;A0A2R8YD50;P51659-3;P51659;P51659-2;A0A2R8Y7L2;E7ET17 E7ER27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 1 NHPMT(1)PEAVK 98.942 0.02579 3179000 32886 33137 34739 43078 30758 23575 40998 37867 30609 41560 TRUE FALSE 35403.77745 31491.46477 35897.18092 39558.3896 29550.28637 24472.16314 35614.91335 42816.34692 33271.31549 40203.9006 0.880605536 0.783293767 0.892878064 0.98394407 0.735010433 0.608701215 0.885857164 1.064979922 0.827564365 1 15.29504786 -7.524147824 24.99914851 0.962847024 0.814290999 0.276562913 0.109078859 61.9144876 1219539.172 0.053495786 0.031200689 2.99E-08 7.524147824 -0.148556025 NHPVAT(ph)LMAT(ph)GHPMVISSDDPAMFGAK ddPTM_A459_MK2206_30min_R1 1 NHPVATLMATGHPMVISSDDPAMFGAK 27 0 B4E3Q4;Q9NZK5;A0A087X0I3;Q9NZK5-2 B4E3Q4 CECR1 Adenosine deaminase CECR1 2 NHPVAT(0.954)LMAT(0.967)GHPMVIS(0.075)S(0.003)DDPAMFGAK 50.827 0.013846 9167600 1213.8 1053.8 1232.9 1072.7 1162.7 884.23 1149.6 1165.2 953.14 1109.9 TRUE FALSE 1110.559936 985.1974285 1149.214183 1155.31954 1116.387197 934.2943385 1072.912282 1155.012779 1052.222314 1247.402791 0.89029778 0.789798961 0.921285563 0.926180018 0.894969295 0.748991701 0.860116948 0.925934099 0.843530511 1 10.28471168 -10.96884387 0.727079677 1.052890117 0.866260985 0.333739733 0.05637536 140.543466 26.95974929 14.26231584 0.020729873 1.07E-11 10.96884387 -0.186629132 NHS(ph)GSRTPPVALNSSR ddPTM_A459_MK2206_30min_R2 1 NHSGSRTPPVALNSSR 16 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 NHS(0.572)GS(0.214)RT(0.214)PPVALNSSR 65.287 0.024027 7008400 5865.4 10696 7476.9 9237.7 13085 11116 9735.6 5591.5 10483 5902.7 TRUE FALSE 6314.459534 10164.85219 7726.176114 8482.95036 12571.21715 11539.02717 8457.304025 6322.328248 11394.79239 5710.095382 1.105841341 1.780154536 1.353073039 1.48560572 2.201577436 2.020811632 1.481114318 1.107219376 1.995552023 1 12.47929913 -11.01926885 3.759163328 0.992094933 1.618306009 0.207040966 0.360740194 43230051.31 63620421.42 2375598.649 0.089521598 9.57E-12 11.01926885 0.626211077 NHSDSSTSESEVS(ph)SVSPLK ddPTM_A459_MK2206_30min_R2 1 NHSDSSTSESEVSSVSPLK 19 0 Q9NY27-2;Q9NY27-3;Q9NY27;H7C559;C9IZ04 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 NHSDSSTS(0.001)ESEVS(0.498)S(0.498)VS(0.002)PLK 271.73 8.58E-59 54513000 48881 70246 51236 93366 89653 77304 103440 65010 51266 88217 TRUE FALSE 52623.36694 66757.68579 52944.18267 85737.69914 86132.77275 80245.85789 89858.20375 73507.03021 55725.02401 85338.48651 0.616642843 0.78226939 0.620402175 1.00467799 1.00930748 0.940324362 1.052962238 0.861358494 0.652988192 1 16.3809089 -5.760534186 24.99999705 0.934533711 0.684021233 0.515187474 0.114768687 20.67132187 570871.5575 0.032969449 0.053135485 1.74E-06 5.760534186 -0.250512478 NHSDSSTSESEVS(ph)SVSPLKNK ddPTM_A459_MK2206_30min_R1 1 NHSDSSTSESEVSSVSPLKNK 21 1 Q9NY27-2;Q9NY27-3;Q9NY27;H7C559;C9IZ04 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 NHSDSSTSESEVS(0.849)S(0.137)VS(0.014)PLKNK 157.96 8.32E-08 14579000 2168.7 1310.1 1654.7 1149.1 1958.2 1574.1 2088.8 2017 1082 619.01 TRUE FALSE 1984.240677 1224.812252 1542.383574 1237.603881 1880.200747 1663.224182 1949.459963 1999.365582 1194.477772 695.6976321 2.852159595 1.760552567 2.217031514 1.778939332 2.702611969 2.390728536 2.802165586 2.873900225 1.716949601 1 9.4423166 -6.264764178 24.94896155 2.376293077 2.128830955 0 0.604452314 1156.280072 8676609.795 0.175895798 0.207521181 5.44E-07 6.264764178 -0.247462122 NHSDSSTSESEVS(ph)SVSPLKNK ddPTM_A459_MK2206_30min_R2 2 NHSDSSTSESEVSSVSPLKNK 21 1 Q9NY27-2;Q9NY27-3;Q9NY27;H7C559;C9IZ04 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 NHSDSSTSES(0.002)EVS(0.948)S(0.037)VS(0.013)PLKNK;NHSDSSTSESEVS(0.697)S(0.183)VS(0.119)PLKNK 81.94 0.0060537 11192000 4491.6 13721.9 9511.5 19129 19657.7 20402.6 17310.4 9425 12977.8 11419.8 TRUE FALSE 4835.480349 13040.4904 9828.608663 17566.09951 18885.83993 21179.03524 15037.52369 10656.87986 14106.58559 11047.17286 0.43771202 1.180436892 0.889694475 1.59009909 1.709563176 1.917145274 1.361210137 0.964670327 1.276940785 1 13.43138959 -5.749924215 24.3163223 1.433811456 0.870396322 0.386233061 0.324954599 177.7158426 375273.584 0.094550595 0.161867658 1.78E-06 5.749924215 -0.563415134 NHSDSSTSESEVSS(ph)VSPLK ddPTM_A459_MK2206_30min_R1 1 NHSDSSTSESEVSSVSPLK 19 0 Q9NY27-2;Q9NY27-3;Q9NY27;H7C559;C9IZ04 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 NHSDSSTSESEVS(0.041)S(0.793)VS(0.166)PLK 175.34 3.28E-11 14328000 3468.8 5568.6 5963.1 4026 1888.3 1939.8 3029.8 3210.2 6179.1 6537.5 TRUE FALSE 3173.760345 5206.083128 5558.341386 4336.083218 1813.085012 2049.6298 2827.68757 3182.13356 6821.439557 7347.414856 0.431956056 0.708559845 0.756503001 0.590150863 0.246765025 0.278959313 0.384854759 0.43309567 0.928413556 1 12.84302102 -8.297523538 5.79629345 0.977768392 0.481695405 0.600090116 0.158558376 0.164588013 15.73907804 0.169121968 0.046359694 5.04E-09 8.297523538 -0.496072988 NHSDSSTSESEVSS(ph)VSPLK ddPTM_A459_MK2206_30min_R2 2 NHSDSSTSESEVSSVSPLK 19 0 Q9NY27-2;Q9NY27-3;Q9NY27;H7C559;C9IZ04 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 NHSDSSTSESEVS(0.002)S(0.528)VS(0.47)PLK;NHSDSST(0.01)S(0.01)ESEVS(0.108)S(0.869)VS(0.003)PLK 220.16 3.03E-19 66027000 114002 207328 143943 232208 237250 194918 282188 167537 153814 231710 TRUE FALSE 122730.0808 197032.393 148741.9878 213235.8636 227934.3729 202335.7411 245136.3766 189434.6611 167192.4637 224149.3217 0.54753715 0.879022928 0.663584376 0.951311661 1.016886294 0.902682817 1.093629795 0.845127077 0.745897701 1 17.77410061 -4.204529243 0.765331649 0.932965648 4.69E-11 0.455093817 0.118697883 5.682068611 1.359014248 0.046062878 5.572025716 6.24E-05 4.204529243 -0.932965648 NHSDSSTSESEVSSVS(ph)PLK ddPTM_A459_MK2206_30min_R1 6 NHSDSSTSESEVSSVSPLK 19 0 Q9NY27-2;Q9NY27-3;Q9NY27;H7C559;C9IZ04 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 NHSDSSTSESEVSS(0.03)VS(0.969)PLK;NHSDSSTSESEVSS(0.062)VS(0.938)PLK;NHSDSSTSESEVS(0.001)S(0.178)VS(0.821)PLK;NHSDSSTSESEVS(0.001)S(0.086)VS(0.913)PLK;NHSDSSTSESEVS(0.003)S(0.413)VS(0.585)PLK;NHSDSSTSESEVSS(0.047)VS(0.952)PLK 253.57 3.33E-38 500917000 50971.5 36987.6 50960.8 28649.3 41184.3 44352.4 51954.4 39901.5 43638.1 45965.3 TRUE FALSE 46636.10626 34579.70052 47501.72288 30855.87405 39543.84212 46863.59456 48488.61677 39552.64539 48174.43666 51659.82838 0.902753798 0.66937312 0.919509885 0.597289519 0.765465999 0.90715738 0.938613586 0.765636407 0.932531876 1 15.65675523 -6.757999105 24.45855041 0.896004245 0.763852721 0.29464065 0.105489369 90.53325842 643643.5571 0.034059607 0.032744246 1.75E-07 6.757999105 -0.132151524 NHSDSSTSESEVSSVS(ph)PLK ddPTM_A459_MK2206_30min_R2 3 NHSDSSTSESEVSSVSPLK 19 0 Q9NY27-2;Q9NY27-3;Q9NY27;H7C559;C9IZ04 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 NHSDSSTSESEVS(0.002)S(0.007)VS(0.991)PLK;NHSDS(0.001)S(0.001)TSESEVS(0.018)S(0.054)VS(0.926)PLK;NHSDSSTSESEVSS(0.015)VS(0.985)PLK 325.98 8.87E-136 110020200 130569 184944 147854 185609 196383 144701 220160 165126 122094 167206 TRUE FALSE 140565.463 175759.9499 152783.3786 170444.151 188672.0167 150207.698 191252.7275 186708.5352 132713.5154 161750.0819 0.869028698 1.086614287 0.944564459 1.053750013 1.166441553 0.92864063 1.18239648 1.154302569 0.820484997 1 17.30340692 -4.753054901 24.93027896 1.045052521 0.869028358 0.168500018 0.111106774 530.9567865 1578613.085 0.026663212 0.297229764 1.77E-05 4.753054901 -0.176024163 NHSGNDERDEEDEER ddPTM_A459_MK2206_30min_R1 1 NHSGNDERDEEDEER 15 1 A0A0D9SGE8;Q8IWS0-3;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 0 69.314 0.043755 4461900 233.49 143.31 292.69 134.66 132 194.14 183.26 145.59 0 218.4 FALSE TRUE 213.6304494 133.980493 272.8230183 145.0315365 126.7421605 205.132039 171.0350598 144.317122 0 245.4570408 0.870337427 0.545840904 1.111489886 0.590863216 0.516351701 0.835714626 0.696802419 0.587952668 0 1 7.93932674 -7.932280634 4.613394187 0.439393553 0.732699294 0.098811771 0.280446513 0.355863488 14.57562119 0.156589244 0.070243564 1.17E-08 7.932280634 0.293305741 NHSGNDERDEEDEER ddPTM_A459_MK2206_30min_R2 2 NHSGNDERDEEDEER 15 1 A0A0D9SGE8;Q8IWS0-3;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 0 ; 90.759 0.012134 7090700 1604.66 1692.48 837.42 2784.27 2164.2 1805.65 3225.81 1607.6 1394.6 2890.69 FALSE TRUE 1727.514003 1608.433904 865.3391648 2556.786235 2079.222634 1874.365276 2802.257272 1817.71884 1515.899787 2796.367022 0.61777084 0.575186981 0.309451212 0.914324269 0.743544255 0.670285861 1.002106394 0.650028707 0.542096147 1 11.44933801 -5.769462938 24.99994735 0.776380081 0.508241393 0.400372645 0.160987823 186.4291648 580880.6463 0.045172378 0.068355505 1.70E-06 5.769462938 -0.268138688 NHSVNEEEQEEQGEGS(ph)EDEWEQVGPR ddPTM_A459_MK2206_30min_R1 1 NHSVNEEEQEEQGEGSEDEWEQVGPR 26 0 Q14694;Q14694-3;Q14694-2;H3BNA1 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 NHSVNEEEQEEQGEGS(1)EDEWEQVGPR 205.87 4.67E-33 35085000 2710.2 2503.1 3031.3 2513.5 2500.5 2246.1 2620 2748 1955 2291.7 TRUE FALSE 2479.683258 2340.147735 2825.543802 2707.090206 2400.89979 2373.272241 2445.22458 2723.974526 2158.229246 2575.613097 0.962754561 0.908578908 1.097037363 1.051046917 0.932166323 0.921439731 0.949375736 1.057602374 0.837947768 1 11.33070018 -6.281751187 24.31910519 0.951200681 1.004562117 0.128216618 0.070323131 1335.825761 1599364.448 0.022282002 0.025299635 5.23E-07 6.281751187 0.053361436 NHSVNEEEQEEQGEGS(ph)EDEWEQVGPR ddPTM_A459_MK2206_30min_R2 4 NHSVNEEEQEEQGEGSEDEWEQVGPR 26 0 Q14694;Q14694-3;Q14694-2;H3BNA1 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR 211.78 1.93E-33 192014700 114742 190965 138983 181396 188539 174376 177789 143736 118575 186617 TRUE FALSE 123526.7357 181481.9558 143616.6239 166575.3665 181136.0115 181012.0009 154445.0907 162522.7887 128888.4392 180527.7026 0.68425363 1.00528591 0.795537869 0.922713601 1.003369616 1.002682681 0.85552017 0.900265092 0.713953799 1 17.46186071 -4.745339221 24.83725051 0.908689845 0.684252942 0.341175098 0.094492026 1044.95943 1611933.765 0.023436813 0.599612945 1.80E-05 4.745339221 -0.224436903 NIDDGTSDRPYSHALVAGIDR ddPTM_A459_MK2206_30min_R1 4 NIDDGTSDRPYSHALVAGIDR 21 1 K7ELC7;P61353 K7ELC7 RPL27 60S ribosomal protein L27 0 ;;; 121.51 5.90E-05 72259000 15362.08 13410.59 15023.15 11149.32 13861.18 15164.11 17135.97 13641.03 14362.87 14776.78 FALSE TRUE 14055.45443 12537.55815 14003.42043 12008.04256 13309.05985 16022.6888 15992.86071 13521.76791 15855.94173 16607.43907 0.846334849 0.754936273 0.843201675 0.723052032 0.801391461 0.96478986 0.962993791 0.81419946 0.954749355 1 14.019542 -6.723903014 8.644152163 0.929167317 0.790112024 0.612598673 0.057562452 0.193338682 40.5087463 0.018786461 0.018641051 1.89E-07 6.723903014 -0.139055292 NIDDGTSDRPYSHALVAGIDR ddPTM_A459_MK2206_30min_R2 4 NIDDGTSDRPYSHALVAGIDR 21 1 K7ELC7;P61353 K7ELC7 RPL27 60S ribosomal protein L27 0 ;;; 128.44 4.72E-05 100450100 225444 265898 227667 289449 266477 262395 300827 236488 242863 250881 FALSE TRUE 242704.166 252693.892 235257.3042 265800.0908 256013.774 272380.6256 261328.0535 267397.7936 263986.7847 242694.7735 1.000038701 1.041200386 0.969354637 1.095203193 1.054879635 1.122317641 1.076776602 1.10178637 1.087731643 1 17.88878351 -5.773453464 24.99825921 1.082160238 1.007298153 0.472824271 0.035162849 167.8883903 349333.0755 0.009219863 0.013797522 1.68E-06 5.773453464 -0.074862084 NIDDGTSDRPYSHALVAGIDRYPR ddPTM_A459_MK2206_30min_R1 2 NIDDGTSDRPYSHALVAGIDRYPR 24 2 K7ELC7;P61353 K7ELC7 RPL27 60S ribosomal protein L27 0 ; 72.383 0.00046195 47373000 6899.2 6086.3 7322 6977.3 8724.1 5899.7 6052.7 8270.9 4262.5 3136.3 FALSE TRUE 6312.386811 5690.080764 6825.00304 7514.692855 8376.600623 6233.735916 5648.935427 8198.588393 4705.602129 3524.848522 1.790824988 1.614276678 1.936254281 2.131919374 2.376442724 1.768511718 1.602603741 2.32594063 1.334979957 1 11.78334554 -8.472724051 5.299401343 1.002077717 1.933607352 0.609568585 0.255118606 0.120809241 7.478569589 0.257087769 0.066802065 3.37E-09 8.472724051 0.931529635 NIDDGTSDRPYSHALVAGIDRYPR ddPTM_A459_MK2206_30min_R2 1 NIDDGTSDRPYSHALVAGIDRYPR 24 2 K7ELC7;P61353 K7ELC7 RPL27 60S ribosomal protein L27 0 48.832 0.024065 3775000 6270 27344 13195 26080 26590 33683 16655 13519 25098 9279.1 FALSE TRUE 6750.036021 25986.13672 13634.91471 23949.18057 25545.943 34964.83017 14468.17849 15285.97972 27280.97867 8976.323727 0.75198224 2.894964299 1.518986517 2.668038866 2.845924877 3.895228295 1.611815587 1.702922063 3.039215107 1 13.13190899 -5.768386646 24.9937743 2.472721909 1.839276328 0.0932804 0.917812684 403.5973502 1452003.243 0.255750848 0.388808127 1.70E-06 5.768386646 -0.633445581 NIDEHANEDVER ddPTM_A459_MK2206_30min_R1 2 NIDEHANEDVER 12 0 P61026 P61026 RAB10 Ras-related protein Rab-10 0 ; 159.58 0.00065291 33955000 15042.2 14872.3 12223.3 12687.8 17692.7 14435.5 16829.1 15237.6 15775.9 13437.8 FALSE TRUE 13762.7819 13904.11057 11393.61645 13665.01655 16987.96229 15252.82554 15706.46145 15104.37927 17415.86126 15102.57611 0.911287041 0.920644959 0.75441543 0.904813619 1.124838714 1.009948596 1.039985584 1.000119394 1.15317156 1 13.88250704 -6.117266408 5.577479096 1.050977175 0.862266809 0.664734691 0.0636964 0.137613076 5.774239864 0.018662299 0.024376297 7.63E-07 6.117266408 -0.188710366 NIEDYIHR ddPTM_A459_MK2206_30min_R2 1 NIEDYIHR 8 0 Q9BUQ8 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 0 146.79 0.002531 3305300 29497 38056 35238 39759 35912 40785 38118 37714 33604 39520 FALSE TRUE 31755.313 36166.19438 36412.81733 36510.56252 34501.91444 42337.10175 33113.06081 42643.34929 36526.81518 38230.46564 0.830628465 0.946004548 0.952455502 0.955012237 0.902471729 1.107417894 0.866143278 1.115428457 0.95543736 1 15.22243515 -2.724177484 0.426612064 1.004715686 1.07E-11 0.282869001 0.074091128 36.9554365 1.260417326 0.047332428 27.24394746 0.00188722 2.724177484 -1.004715686 NIGNGIISS(ph)PLTGK ddPTM_A459_MK2206_30min_R2 2 NIGNGIISSPLTGK 14 0 A0A075B784;Q9P275;E9PEW0;K7EMM6 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 NIGNGIIS(0.375)S(0.622)PLT(0.003)GK;NIGNGIIS(0.447)S(0.55)PLT(0.003)GK 254.68 5.06E-28 26685000 132649 122141 123648 117824 117336 105408 159495 96456 88775 129836 TRUE FALSE 142804.7094 116075.6555 127770.3626 108197.4023 112728.7991 109419.3753 138553.1149 109063.1304 96496.48903 125599.462 1.136985041 0.924173191 1.017284315 0.861447976 0.89752613 0.871177102 1.103134621 0.868340745 0.76828744 1 16.93847076 -2.018005436 1.183950685 0.916662782 199.9999994 0.328437794 0.090640381 1626.703575 3.271545789 0.026605583 878362.3272 0.009593886 2.018005436 199.0833366 NIGRDT(ph)PTSAGPNSFNK ddPTM_A459_MK2206_30min_R1 5 NIGRDTPTSAGPNSFNK 17 1 Q8WW12;Q8WW12-3 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 1 NIGRDT(0.989)PT(0.009)S(0.002)AGPNSFNK;NIGRDT(0.99)PT(0.009)S(0.001)AGPNSFNK;NIGRDT(0.985)PT(0.006)S(0.009)AGPNSFNK;NIGRDT(0.971)PT(0.012)S(0.017)AGPNSFNK;NIGRDT(0.97)PT(0.011)S(0.019)AGPNSFNK 124.43 0.011751 63479200 11050.8 11505.8 10355 10142.6 10870.2 9020.1 9711.5 10016.2 9104.8 8327.57 TRUE FALSE 10110.87143 10756.77033 9652.131451 10923.78481 10437.21692 9530.810267 9063.663555 9928.629419 10051.27654 9359.252242 1.080307611 1.149319417 1.031293014 1.16716427 1.115176367 1.018330313 0.968417489 1.060835755 1.073940127 1 13.19217755 -6.761043328 24.99962561 1.024614009 1.109864384 0.477373166 0.044117709 9.660856803 609824.1575 0.015087639 0.014206541 1.73E-07 6.761043328 0.085250375 NIGS(ph)DFIPR ddPTM_A459_MK2206_30min_R1 2 NIGSDFIPR 9 0 Q5T853;Q5T857;P41279-2;P41279 Q5T853 MAP3K8 Mitogen-activated protein kinase kinase kinase 8 1 NIGS(1)DFIPR;NIGS(1)DFIPR 94.538 0.023178 9239100 5427.3 5412.9 5150.9 4338.4 5439 4873.3 5434.4 4995.9 4411.1 4151.7 TRUE FALSE 4965.679635 5060.519226 4801.271259 4672.54432 5222.353113 5149.222035 5071.881092 4952.221373 4869.64963 4666.04394 1.064216218 1.0845417 1.02898115 1.001393124 1.119225018 1.103551981 1.08697671 1.06133192 1.043635614 1 12.18798418 NIHESCMSQIGWNR ddPTM_A459_MK2206_30min_R1 3 NIHESCMSQIGWNR 14 0 P11413-3;P11413;P11413-2;E9PD92 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ;; 299.69 8.76E-78 59401000 6533.02 4241.7 4980.76 3685.57 9631.4 9504.7 8699.8 6142.49 4178.65 4248.15 FALSE TRUE 5977.352343 3965.564559 4642.679888 3969.43324 9247.760943 10042.8479 8119.452216 6088.786858 4613.035621 4774.442894 1.251947604 0.83058163 0.972402433 0.831391919 1.936929847 2.103459634 1.700607253 1.275287399 0.966193485 1 12.22111669 -6.24530828 24.9666919 1.551339368 0.96156817 0.328654945 0.362893138 943.1190506 1459699.499 0.115506395 0.14864654 5.68E-07 6.24530828 -0.589771198 NIHLNLDR ddPTM_A459_MK2206_30min_R2 2 NIHLNLDR 8 0 Q9Y5S9;Q9Y5S9-2;A0A0J9YW13 Q9Y5S9 RBM8A RNA-binding protein 8A 0 ; 123.21 0.0084649 5357300 54720 58985 54565 55357 53087 47235 60425 49252 43344 53151 FALSE TRUE 58909.40527 56055.89067 56384.16987 50834.15602 51002.53764 49032.56102 52491.12492 55689.40551 47113.98277 51416.68722 1.145725414 1.090227584 1.096612266 0.988670386 0.99194523 0.953631276 1.020896673 1.083099836 0.916316965 1 15.64994904 -5.71294595 4.766949886 0.996169987 1.111766472 0.614936017 0.042611903 0.138280214 6.717180985 0.01182602 0.020466436 1.94E-06 5.71294595 0.115596485 NIIEATHMYDNAAEACSTTEEVFNS(ph)PR ddPTM_A459_MK2206_30min_R1 4 NIIEATHMYDNAAEACSTTEEVFNSPR 27 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 NIIEATHMYDNAAEACS(0.002)T(0.004)T(0.033)EEVFNS(0.961)PR;NIIEATHMY(0.009)DNAAEACS(0.026)T(0.069)T(0.044)EEVFNS(0.853)PR;NIIEATHMYDNAAEACS(0.002)T(0.024)T(0.001)EEVFNS(0.972)PR;NIIEATHMYDNAAEACS(0.027)T(0.003)TEEVFNS(0.969)PR 200.32 3.48E-40 93905600 5559.39 6311.96 6282.86 5193.17 5836.82 5440.4 5601.52 5473.27 4530.81 4798.61 TRUE FALSE 5086.534687 5901.050257 5856.396968 5593.148853 5604.3271 5748.430746 5227.852821 5425.417777 5001.803913 5393.098034 0.943156355 1.094185609 1.085905899 1.037093859 1.039166554 1.065886566 0.969359872 1.005992797 0.927445391 1 12.39689854 -7.266993817 24.65895169 0.97619891 1.047842566 0.371331672 0.043531527 407.6071424 1809563.576 0.017414499 0.012123058 5.41E-08 7.266993817 0.071643656 NIIGSS(ph)PVADFSAIK ddPTM_A459_MK2206_30min_R1 2 NIIGSSPVADFSAIK 15 0 B1AUU8;P42566 B1AUU8 EPS15 Epidermal growth factor receptor substrate 15 1 NIIGS(0.031)S(0.969)PVADFSAIK;NIIGS(0.036)S(0.964)PVADFSAIK 255.23 9.39E-29 46472000 11110.2 13013.4 12622.1 10971.9 11391.5 10512.1 12604.5 11021.3 11287 11126.7 TRUE FALSE 10165.21915 12166.22529 11765.34702 11816.95764 10937.75243 11107.28602 11763.6768 10924.94194 12460.32404 12505.1596 0.812882 0.972896443 0.940839413 0.944966559 0.874659163 0.888216254 0.940705851 0.873634747 0.996414635 1 13.61023585 -8.278525024 23.83769121 0.998207388 0.910289501 0.406965674 0.044244264 520.1997905 725764.1325 0.040947686 0.010699876 5.27E-09 8.278525024 -0.087917887 NIIGSS(ph)PVADFSAIK ddPTM_A459_MK2206_30min_R2 2 NIIGSSPVADFSAIK 15 0 B1AUU8;P42566 B1AUU8 EPS15 Epidermal growth factor receptor substrate 15 1 NIIGS(0.075)S(0.912)PVADFS(0.013)AIK;NIIGS(0.059)S(0.94)PVADFS(0.001)AIK 102.63 0.0061729 23220000 73991 79161 85340 79558 82256 68455 98869 74704 70591 91424 TRUE FALSE 79655.80785 75229.97985 88185.19301 73057.85691 79026.21614 71060.10299 85887.38154 84468.0693 76730.87758 88440.84237 0.900667675 0.850624868 0.997109374 0.826064689 0.893548886 0.803476099 0.971128036 0.955079882 0.867595508 1 16.43242515 -9.667995941 0.409465403 1.018312872 0.886610973 0.214518485 0.059723416 8.50540857 1.710724169 0.314391163 0.03968575 2.15E-10 9.667995941 -0.131701899 NIIHGS(ph)DSVESAEK ddPTM_A459_MK2206_30min_R1 3 NIIHGSDSVESAEK 14 0 P15531;P15531-2 P15531 NME1 Nucleoside diphosphate kinase A 1 NIIHGS(0.936)DS(0.064)VESAEK;NIIHGS(0.98)DS(0.02)VESAEK;NIIHGS(0.681)DS(0.319)VESAEK 231.21 2.18E-13 69184000 15834.8 15268.8 16980.8 13956.2 13255.5 14394.5 17339.5 14411.6 16464.5 16187.6 TRUE FALSE 14487.96711 14274.79834 15828.19061 15031.10894 12727.50537 15209.50415 16182.81359 14285.6009 18176.04369 18193.0421 0.796346594 0.784629545 0.870013411 0.826200965 0.699580933 0.836006649 0.889505642 0.785223319 0.999065665 1 14.15109918 -8.266663639 24.61766295 0.999532882 0.812281942 0.698946254 0.049503272 213.0146005 1003742.283 0.04467241 0.012903294 5.41E-09 8.266663639 -0.187250939 NIIHGS(ph)DSVESAEK ddPTM_A459_MK2206_30min_R2 5 NIIHGSDSVESAEK 14 0 P15531;P15531-2 P15531 NME1 Nucleoside diphosphate kinase A 1 NIIHGS(1)DSVESAEK;NIIHGS(0.966)DS(0.033)VES(0.002)AEK;NIIHGS(0.811)DS(0.054)VES(0.135)AEK;NIIHGS(0.831)DS(0.169)VESAEK;NIIHGS(0.997)DS(0.003)VESAEK 199.61 6.85E-05 138328000 327747 329720 329508 305020 354579 251046 411992 313885 239678 326338 TRUE FALSE 352839.5623 313346.5843 340493.6323 280098.8903 340656.4468 260599.7314 357896.9555 354910.8472 260524.7592 315689.6178 1.117678702 0.992578047 1.078570891 0.88726038 1.079086633 0.825493513 1.133698846 1.124239846 0.825256025 1 18.26814729 -2.414600961 1.301516943 0.995816707 67.45835483 0.100744189 0.109334584 2089.181916 8.555627526 0.03058974 412738.0991 0.003849453 2.414600961 66.46253812 NIIHGS(ph)DSVK ddPTM_A459_MK2206_30min_R1 2 NIIHGSDSVK 10 0 Q32Q12;P22392-2;P22392;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 1 NIIHGS(0.639)DS(0.361)VK;NIIHGS(0.988)DS(0.012)VK 141.37 0.0013161 73591000 12884.2 13193.4 14422.3 12533.2 12173.1 10069.5 12318.8 12846 12319.4 11521.8 TRUE FALSE 11788.33113 12334.50726 13443.35446 13498.50924 11688.21965 10639.62639 11497.03533 12733.68878 13600.04572 12949.20757 0.910351546 0.95252989 1.038160396 1.042419713 0.902620457 0.821643049 0.887856285 0.983356604 1.050260847 1 13.66057619 -7.997684366 23.6051712 1.022356549 0.939118933 0.240268534 0.063660604 57.40473256 585179.3801 0.040716357 0.019326667 1.01E-08 7.997684366 -0.083237617 NIIHGS(ph)DSVK ddPTM_A459_MK2206_30min_R2 3 NIIHGSDSVK 10 0 Q32Q12;P22392-2;P22392;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 1 NIIHGS(0.831)DS(0.169)VK;NIIHGS(0.914)DS(0.086)VK;NIIHGS(0.948)DS(0.052)VK 143.94 0.0010351 71503000 386005 446603 436094 354648 405453 323904 521238 354799 363238 373116 TRUE FALSE 415557.8396 424425.3444 450633.1563 325672.1239 389532.878 336230.3937 452798.8245 401172.4475 394831.7847 360941.2555 1.1513171 1.175884823 1.248494456 0.902285674 1.079214061 0.931537719 1.254494513 1.111461883 1.093894861 1 18.46140453 -5.723702621 24.99998753 1.062306873 1.190297406 0.301081454 0.096093543 232.0516324 153728.797 0.026617904 0.046102057 1.89E-06 5.723702621 0.127990533 NIIHGSDS(ph)VESAEK ddPTM_A459_MK2206_30min_R1 2 NIIHGSDSVESAEK 14 0 P15531;P15531-2 P15531 NME1 Nucleoside diphosphate kinase A 1 NIIHGSDS(0.97)VES(0.03)AEK;NIIHGS(0.003)DS(0.997)VESAEK 224.36 2.31E-09 14959400 9733.8 5659.9 7699.1 4910.3 9013.1 9908.3 11694.4 8206 7667.7 8624.5 TRUE FALSE 8905.889196 5291.439481 7176.506543 5288.492157 8654.089141 10469.29938 10914.28791 8134.255807 8464.784854 9692.968172 0.918798972 0.545904968 0.740382762 0.5456009 0.892821372 1.080092207 1.126000593 0.839191429 0.873291308 1 13.2427228 -6.454182698 5.728356469 0.983317496 0.683006063 0.550871081 0.126377961 0.168811913 10.42488542 0.040117425 0.045090561 3.51E-07 6.454182698 -0.300311433 NIIHGSDS(ph)VESAEK ddPTM_A459_MK2206_30min_R2 2 NIIHGSDSVESAEK 14 0 P15531;P15531-2 P15531 NME1 Nucleoside diphosphate kinase A 1 NIIHGS(0.002)DS(0.759)VES(0.239)AEK;NIIHGS(0.018)DS(0.956)VES(0.026)AEK 184.92 7.87E-05 13913400 56349 82753 68363 88005 96515 76014 116366 83079 68085 80385 TRUE FALSE 60663.12277 78643.60635 70642.1883 80814.70999 92725.33615 78906.76604 101087.0044 93937.71055 74006.91023 77762.04403 0.780112245 1.011336666 0.908440476 1.039256503 1.19242411 1.014720832 1.299953026 1.208014935 0.95170994 1 16.24677852 -5.908100916 3.017666807 1.12646636 0.908330347 0.404830531 0.113051623 0.247762305 4.538003343 0.033086355 0.052211826 1.24E-06 5.908100916 -0.218136014 NIIHGSDS(ph)VK ddPTM_A459_MK2206_30min_R1 3 NIIHGSDSVK 10 0 Q32Q12;P22392-2;P22392;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 1 NIIHGS(0.081)DS(0.919)VK;NIIHGS(0.185)DS(0.815)VK;NIIHGS(0.359)DS(0.641)VK 120.84 0.0049637 26265500 12033.1 8540.7 11767.6 8938.8 12330.9 11343.1 13378.8 12858.3 9175.2 8710.9 TRUE FALSE 11009.62166 7984.698878 10968.8481 9627.267925 11839.73414 11985.33652 12486.32466 12745.88124 10128.99487 9790.072056 1.124570033 0.815591431 1.120405247 0.983370487 1.209361287 1.224233739 1.275406819 1.301919043 1.034619032 1 13.25710376 -6.263089982 24.72445123 1.196908974 1.004843443 0.292179542 0.121312943 135.2575433 2026024.866 0.035389732 0.042298775 5.46E-07 6.263089982 -0.192065531 NIIHGSDS(ph)VK ddPTM_A459_MK2206_30min_R2 5 NIIHGSDSVK 10 0 Q32Q12;P22392-2;P22392;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 1 NIIHGS(0.38)DS(0.62)VK;NIIHGS(0.058)DS(0.942)VK;NIIHGS(0.001)DS(0.999)VK;NIIHGS(0.003)DS(0.997)VK;NIIHGS(0.04)DS(0.96)VK 151.66 0.000539 64472000 292139 436748 370144 395245 481472 384313 536948 381046 415595 419070 TRUE FALSE 314505.3865 415059.7294 382484.4162 362952.2192 462566.9901 398938.3005 466446.0826 430850.0205 451742.7019 405395.7802 0.775798372 1.023838307 0.94348396 0.895303397 1.141025666 0.984071172 1.150594321 1.062788617 1.114325121 1 18.62897155 -6.252809111 24.9907965 1.077793441 0.920185305 0.52861805 0.076450735 518.128801 1500351.541 0.021558398 0.027396983 5.59E-07 6.252809111 -0.157608135 NIILEEGKEILVGDVGQTVDDPYATFVK ddPTM_A459_MK2206_30min_R1 1 NIILEEGKEILVGDVGQTVDDPYATFVK 28 1 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;E9PLJ3;E9PS23 P23528 CFL1 Cofilin-1 0 208.77 7.21E-42 5837400 1939.2 2489.2 3004.8 2870.5 2615.3 2305.5 2002.4 2133.6 1686.4 1483.1 FALSE TRUE 1774.260857 2327.152628 2800.842548 3091.586407 2511.127063 2436.035418 1868.82355 2114.94616 1861.707315 1666.837625 1.064447329 1.396148367 1.680333169 1.854761592 1.506521706 1.46147134 1.121179125 1.268837545 1.116909822 1 10.70289786 -7.193238341 3.823106504 1.146849387 1.521336689 0.444062245 0.200095203 0.250453943 7.212849846 0.089023163 0.066023091 6.41E-08 7.193238341 0.374487302 NIIS(ph)PPWDFR ddPTM_A459_MK2206_30min_R1 1 NIISPPWDFR 10 0 Q5T8C6;Q13042-4;Q13042-3;Q13042-2;Q13042 Q5T8C6 CDC16 Cell division cycle protein 16 homolog 1 NIIS(1)PPWDFR 110.64 0.0093376 11656000 3113.5 3560.4 3138.7 2831.2 3083.9 2752.8 3569.9 2835 3283.7 3084.8 TRUE FALSE 2848.680475 3328.617313 2925.653789 3049.259515 2961.061733 2908.661157 3331.758485 2810.213894 3625.052366 3466.968313 0.821663257 0.96009453 0.843865165 0.879517561 0.854078107 0.838963871 0.961000558 0.810568093 1.045597202 1 11.75945894 -8.27146683 24.99053301 1.022798627 0.87489244 0.590750347 0.050391183 502.8824449 1253274.964 0.043073317 0.011647446 5.35E-09 8.27146683 -0.147906187 NIIS(ph)PPWDFR ddPTM_A459_MK2206_30min_R2 4 NIISPPWDFR 10 0 Q5T8C6;Q13042-4;Q13042-3;Q13042-2;Q13042 Q5T8C6 CDC16 Cell division cycle protein 16 homolog 1 NIIS(1)PPWDFR;NIIS(1)PPWDFR;NIIS(1)PPWDFR;NIIS(1)PPWDFR 107.85 0.011041 8999000 57251.1 67542.9 63277.1 73560.1 66450.5 66674.6 67582.6 52304.7 55849.5 60862.7 TRUE FALSE 61634.28823 64188.8178 65386.72693 67550.00452 63841.31948 69211.94862 58708.92344 59141.10388 60707.18856 58876.75508 1.046835685 1.090223429 1.110569474 1.147311947 1.084321298 1.175539456 0.997149441 1.004489867 1.031089238 1 15.84541054 -7.282928158 24.97854781 1.008556279 1.10894682 0.68110237 0.03384002 489.1712798 568610.0208 0.014229619 0.009602677 5.21E-08 7.282928158 0.100390541 NILVQTPESES(ph)PQSHR ddPTM_A459_MK2206_30min_R2 2 NILVQTPESESPQSHR 16 0 Q9C026-5;Q9C026;Q9C026-4 Q9C026-5 TRIM9 E3 ubiquitin-protein ligase TRIM9 1 NILVQTPES(0.101)ES(0.821)PQS(0.077)HR;NILVQTPES(0.133)ES(0.852)PQS(0.015)HR 173.09 3.42E-06 27682000 83611 115809 89611 105508 77765 94432 96614 76255 78952 89280 TRUE FALSE 90012.32245 110058.0935 92598.58601 96887.6589 74711.55536 98025.67593 83928.46575 86221.79032 85819.10225 86366.80091 1.042209755 1.274310178 1.072154868 1.121815997 0.86504947 1.134992554 0.97176768 0.998320992 0.993658458 1 16.39818923 -6.038245518 24.33450455 0.999241511 1.136192173 0.38103741 0.083206555 397.0289896 252617.294 0.02326773 0.030046588 9.16E-07 6.038245518 0.136950662 NINLSS(ph)S(ph)KLEPS(ph)K ddPTM_A459_MK2206_30min_R2 1 NINLSSSKLEPSK 13 1 Q8N841-2;Q8N841 Q8N841-2 TTLL6 Tubulin polyglutamylase TTLL6 3 NINLS(0.408)S(0.592)S(1)KLEPS(1)K 104.9 0.016444 0 7457.8 7414.6 8673.6 8744.2 9203.8 8273.1 7595.5 6936.4 6873.1 7737.8 TRUE FALSE 8028.774902 7046.401746 8962.773495 8029.770889 8842.412567 8587.938618 6598.201726 7843.011296 7470.909814 7485.31622 1.072603303 0.941363269 1.197380743 1.072736362 1.181301138 1.147304718 0.881486036 1.047786235 0.998075378 1 12.86984755 -7.242088146 24.9877133 0.985819084 1.101402278 0.365945108 0.077487397 963.1159068 1243646.468 0.030416828 0.023525445 5.73E-08 7.242088146 0.115583195 NINMDNDLEVLTS(ph)SPTR ddPTM_A459_MK2206_30min_R2 1 NINMDNDLEVLTSSPTR 17 0 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 NINMDNDLEVLT(0.001)S(0.499)S(0.499)PT(0.001)R 154.46 8.27E-05 23310000 45010 48747 46209 46909 41107 46486 47524 43065 34693 39869 TRUE FALSE 48456.00021 46326.29486 47749.585 43076.38465 39492.93263 48255.0573 41284.04171 48693.74336 37710.53443 38568.0778 1.256375816 1.201156436 1.238059756 1.116892184 1.023979801 1.251165732 1.070419997 1.262540063 0.977765463 1 15.23511962 -1.522878765 0.056597379 0.761661156 1.911987983 0.361720206 0.0871629 455.1627219 1.93913304 8.416885468 43.92785639 0.029999999 1.522878765 1.150326827 NINMDNDLEVLTSS(ph)PTR ddPTM_A459_MK2206_30min_R1 5 NINMDNDLEVLTSSPTR 17 0 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 NINMDNDLEVLT(0.192)S(0.192)S(0.608)PT(0.008)R;NINMDNDLEVLT(0.069)S(0.205)S(0.612)PT(0.114)R;NINMDNDLEVLTS(0.071)S(0.929)PTR;NINMDNDLEVLTS(0.076)S(0.924)PTR;NINMDNDLEVLTS(0.153)S(0.846)PTR 332.26 7.33E-136 113207700 14619.1 14975.2 13512.5 12112.5 14508.9 13206.7 13566.8 13811.6 12268.3 10626.2 TRUE FALSE 13375.66878 14000.31176 12595.30915 13045.40685 13930.97979 13954.45194 12661.78353 13690.84664 13543.63369 11942.65388 1.119991328 1.17229486 1.054649099 1.092337346 1.166489453 1.168454858 1.06021523 1.146382268 1.134055615 1 13.54383585 -10.97046261 3.123483636 0.997674905 1.123689214 0.453936342 0.040758885 10021952.45 13563918.52 207216.3716 0.010229712 1.07E-11 10.97046261 0.12601431 NINMDNDLEVLTSS(ph)PTR ddPTM_A459_MK2206_30min_R2 4 NINMDNDLEVLTSSPTR 17 0 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 NINMDNDLEVLT(0.001)S(0.242)S(0.757)PT(0.001)R;NINMDNDLEVLT(0.001)S(0.18)S(0.818)PT(0.001)R;NINMDNDLEVLTS(0.227)S(0.773)PTR;NINMDNDLEVLT(0.276)S(0.276)S(0.447)PT(0.001)R 251 1.36E-30 30650300 74735.2 89951 74933.2 87037 87782 84245.2 92134 71622.6 73350 82867 TRUE FALSE 80456.98437 85484.16414 77431.43549 79925.79868 84335.23761 87451.21012 80036.69513 80983.91974 79729.85041 80163.05658 1.003666624 1.066378551 0.96592419 0.997040309 1.052046182 1.090916612 0.998423695 1.010239918 0.994595938 1 16.2906499 NINPSTANS(ph)PK ddPTM_A459_MK2206_30min_R1 2 NINPSTANSPK 11 0 P46937-6;P46937-7;P46937;P46937-9;H0YCI3;P46937-4 P46937-6 YAP1 Transcriptional coactivator YAP1 1 NINPSTANS(1)PK;NINPS(0.001)T(0.001)ANS(0.998)PK 98 0.018683 8500600 5777.7 6701.3 7070.9 5684.3 5226.8 3912.9 4775.1 5579.5 5620.9 5586.9 TRUE FALSE 5286.276275 6265.044152 6590.947009 6122.105771 5018.605488 4134.445017 4456.561792 5530.71902 6205.21267 6279.047351 0.841891449 0.997769853 1.049673086 0.975005511 0.799262246 0.658451001 0.709751264 0.880821359 0.988241101 1 12.61632998 -6.25721199 23.70833911 0.817930224 0.974318777 0.217797599 0.112854328 240.3886339 1348159.172 0.035843494 0.044567313 5.53E-07 6.25721199 0.156388552 NINPSTANS(ph)PK ddPTM_A459_MK2206_30min_R2 1 NINPSTANSPK 11 0 P46937-6;P46937-7;P46937;P46937-9;H0YCI3;P46937-4 P46937-6 YAP1 Transcriptional coactivator YAP1 1 NINPSTANS(1)PK 134.06 0.0017019 9639800 31950 32076 33073 23631 30693 23629 37695 27032 21391 29358 TRUE FALSE 34396.11657 30483.15248 34175.63731 21700.27171 29487.8386 24528.21815 32745.60122 30565.17521 23251.55051 28400.05086 1.211128696 1.073348517 1.203365356 0.764092706 1.038302316 0.863668106 1.153012062 1.076236636 0.818715101 1 14.79360589 -5.718093854 24.99999261 0.969720187 1.153687834 0.38179434 0.117947549 159.2579635 91852.51239 0.031576916 0.054692415 1.91E-06 5.718093854 0.183967647 NINTFVET(ph)PVQK ddPTM_A459_MK2206_30min_R2 2 NINTFVETPVQK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 NINT(0.002)FVET(0.998)PVQK;NINTFVET(1)PVQK 184.87 0.00024432 35413000 138798 126957 98886 142183 101082 103842 137025 97385 63388 98364 TRUE FALSE 149424.4816 120652.5 102182.8099 130566.1941 97113.01278 107793.7801 119033.4529 110113.5539 68901.37366 95154.39074 1.570337222 1.267965661 1.073863319 1.372151018 1.020583622 1.132830332 1.250950713 1.157209384 0.724100834 1 16.53798261 -1.522878745 0.297306084 1.004473814 5.021461904 0.496567682 0.154871611 51.51821425 0.733500886 0.1624958 109.7223022 0.03 1.522878745 4.01698809 NIPCAAVS(ph)PNR ddPTM_A459_MK2206_30min_R1 1 NIPCAAVSPNR 11 0 Q13118-2;Q13118 Q13118-2 KLF10 Krueppel-like factor 10 1 NIPCAAVS(1)PNR 81.185 0.042366 9743200 2119.4 2308.1 2142.8 1957.6 2064.8 1851.4 1920.3 1918.8 2204.1 1874.9 TRUE FALSE 1939.133901 2157.84227 1997.352706 2108.374691 1982.554644 1956.224668 1792.200291 1902.024134 2433.224082 2107.176767 0.920252127 1.024044259 0.947880946 1.000568497 0.940858249 0.928362869 0.850522044 0.902640995 1.154731829 1 11.04109563 -8.251218502 24.88281104 1.07736592 0.941254226 0.481895576 0.057199657 506.9566623 1234197.426 0.040862475 0.015049178 5.61E-09 8.251218502 -0.136111695 NIPCAAVS(ph)PNR ddPTM_A459_MK2206_30min_R2 2 NIPCAAVSPNR 11 0 Q13118-2;Q13118 Q13118-2 KLF10 Krueppel-like factor 10 1 NIPCAAVS(1)PNR;NIPCAAVS(1)PNR 127.78 0.0029026 35512000 129471 192807 148700 177966 156893 134344 184399 139883 144062 155276 TRUE FALSE 139383.3993 183232.4847 153657.5838 163425.6085 150732.5925 139456.5551 160187.1898 158166.1884 156592.2524 150209.3568 0.927927542 1.219847342 1.022956139 1.087985542 1.003483376 0.928414567 1.066426175 1.052971611 1.042493328 1 17.19661516 -6.262822024 24.8495106 1.016458975 1.072782371 0.086680508 0.076173211 265.2631712 4767461.987 0.022531558 0.026838238 5.46E-07 6.262822024 0.056323395 NIPS(ph)PGQLDPDTR ddPTM_A459_MK2206_30min_R1 2 NIPSPGQLDPDTR 13 0 Q9P2D1 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 NIPS(0.998)PGQLDPDT(0.002)R;NIPS(0.999)PGQLDPDT(0.001)R 127.05 0.0019662 15556000 4445.4 5239.1 4805.7 2972.9 4424 3870.9 5229.8 4559.9 4328.3 4344.9 TRUE FALSE 4067.295386 4898.033638 4479.502473 3201.873273 4247.782712 4090.067013 4880.929584 4520.033275 4778.242274 4883.179014 0.832919574 1.003041999 0.91733325 0.655694429 0.869880604 0.837582853 0.999539351 0.925633335 0.978510569 1 12.25360495 -7.257390526 24.39418842 0.969723594 0.854332197 0.340039305 0.083873894 342.8110674 2065431.223 0.03525886 0.026248326 5.53E-08 7.257390526 -0.115391397 NIPS(ph)PGQLDPDTR ddPTM_A459_MK2206_30min_R2 3 NIPSPGQLDPDTR 13 0 Q9P2D1 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 NIPS(1)PGQLDPDTR;NIPS(0.999)PGQLDPDT(0.001)R;NIPS(1)PGQLDPDTR 156.72 0.00036515 28628500 126888 143616 135542 156977 141809 137568 147617 114824 116856 141978 TRUE FALSE 136602.6428 136484.2383 140060.9026 144151.477 136240.8661 142803.2466 128234.7106 129831.891 127019.9237 137345.2695 0.994592994 0.9937309 1.019772309 1.049555456 0.991958927 1.039739098 0.933666744 0.945295688 0.924821977 1 17.0674477 -7.267784708 24.99382105 0.946387407 1.014684848 0.591095344 0.025944482 339.3736339 1336762.177 0.010404185 0.007198286 5.40E-08 7.267784708 0.068297441 NIPSPGQLDPDT(ph)R ddPTM_A459_MK2206_30min_R1 1 NIPSPGQLDPDTR 13 0 Q9P2D1 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 NIPS(0.131)PGQLDPDT(0.869)R 111.88 0.011931 10967000 2971.5 3078 2903.5 2385.7 2681.3 2831.6 2972.4 2895 3591.5 3093.1 TRUE FALSE 2718.758321 2877.621641 2706.41851 2569.447027 2574.498143 2991.922745 2774.116619 2869.68932 3964.849277 3476.29658 0.782084687 0.827783699 0.778534986 0.739133434 0.74058645 0.860663835 0.79800919 0.825501868 1.140538267 1 11.76333546 -8.185939132 5.571730583 1.068667459 0.791575095 0.846257277 0.047182615 0.071872777 3.879869482 0.033620946 0.012096627 6.52E-09 8.185939132 -0.277092364 NIPSPGQLDPDT(ph)RIPVINLEDGTR ddPTM_A459_MK2206_30min_R1 1 NIPSPGQLDPDTRIPVINLEDGTR 24 1 Q9P2D1 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 NIPS(0.214)PGQLDPDT(0.786)RIPVINLEDGT(0.001)R 78.419 0.00044177 2818600 846.87 697.81 973.13 794.55 1106.9 871.01 874.17 948.28 704.47 444.54 TRUE FALSE 774.8392594 652.3824422 907.0766469 855.7463787 1062.809829 920.3258335 815.8557143 939.9892879 777.7021775 499.6129713 1.550878988 1.30577563 1.81555864 1.712818577 2.127266284 1.842077541 1.632975445 1.881434914 1.55660926 1 8.964667123 -8.606601887 5.917245752 1.000011602 1.734214412 0.535300325 0.205511415 0.806135011 56.33224062 0.214610641 0.055634634 2.47E-09 8.606601887 0.73420281 NISSS(ph)PSVESLPGGR ddPTM_A459_MK2206_30min_R1 1 NISSSPSVESLPGGR 15 0 C9J3F6;Q92609;Q92609-2 C9J3F6;Q92609 TBC1D5 TBC1 domain family member 5 1 NISS(0.002)S(0.912)PS(0.086)VESLPGGR 215.93 3.76E-09 17243000 1305.8 1205.2 1308.2 1214.9 1554.6 1334.4 1864.5 2060.1 2079.4 1954.2 TRUE FALSE 1194.734853 1126.741261 1219.403029 1308.471809 1492.67699 1409.952575 1740.122607 2042.088763 2295.561071 2196.301049 0.543975906 0.513017676 0.555207597 0.595761591 0.679632235 0.641966899 0.792296943 0.929785451 1.045194179 1 11.1008601 -7.465309706 0.880828983 1.046406538 0.549395664 0.961017032 0.037283796 0.111255262 0.16127863 0.033257255 0.01679366 3.43E-08 7.465309706 -0.497010875 NISSS(ph)PSVESLPGGR ddPTM_A459_MK2206_30min_R2 1 NISSSPSVESLPGGR 15 0 C9J3F6;Q92609;Q92609-2 C9J3F6;Q92609 TBC1D5 TBC1 domain family member 5 1 NIS(0.001)S(0.094)S(0.865)PS(0.04)VESLPGGR 185.74 2.16E-05 5003300 18144 21298 22971 23861 26074 31726 30022 24188 35977 45692 TRUE FALSE 19533.11859 20240.37229 23736.84168 21911.47997 25050.20375 32933.35516 26080.07534 27349.45465 39106.21443 44201.07378 0.441915024 0.45791585 0.537019571 0.495722798 0.566732923 0.745080432 0.590032619 0.618750911 0.884734489 1 15.4317938 -8.169424142 0.211662103 1.137722914 0.328100702 0.84553681 0.06945206 1.053352056 0.223290499 0.347235283 0.292237678 6.77E-09 8.169424142 -0.809622211 down NISSSPS(ph)VESLPGGR ddPTM_A459_MK2206_30min_R2 2 NISSSPSVESLPGGR 15 0 C9J3F6;Q92609;Q92609-2 C9J3F6;Q92609 TBC1D5 TBC1 domain family member 5 1 NIS(0.008)S(0.022)S(0.22)PS(0.744)VES(0.006)LPGGR;NISSS(0.077)PS(0.922)VESLPGGR 183.76 7.30E-06 4320700 34323 38244 34716 42060 45293 47130 57621 38991 42604 55428 TRUE FALSE 36950.79527 36344.85857 35873.41411 38623.56346 43514.56924 48923.56518 50055.29348 44087.25758 46309.61891 53619.3889 0.689131227 0.677830526 0.669038101 0.720328304 0.811545415 0.912423028 0.933529727 0.822226036 0.863673008 1 15.71046716 -6.370880241 2.069530681 0.897113585 0.679695563 0.840311438 0.044654936 0.128580274 1.083938546 0.015816135 0.018958742 4.26E-07 6.370880241 -0.217418022 NITSFCPDT(ph)PSEKTAK ddPTM_A459_MK2206_30min_R1 1 NITSFCPDTPSEKTAK 16 1 A9QM74 A9QM74 KPNA7 Importin subunit alpha-8 1 NIT(0.001)S(0.001)FCPDT(0.897)PS(0.102)EKTAK 95.264 0.012166 25358000 3173.6 3264 4039.5 3301 4246.3 3248.7 3409.1 3591.2 3029.6 2060.7 TRUE FALSE 2903.668655 3051.513007 3765.309995 3555.243592 4077.160879 3432.638587 3181.685159 3559.802517 3344.537762 2315.995073 1.253745609 1.317581821 1.625784976 1.535082537 1.760435903 1.482144166 1.373787533 1.537050988 1.444104005 1 11.17741647 -9.398900609 1.216128026 0.998686816 1.493474113 0.516157861 0.139917726 7.347957215 9.323791084 0.168563179 0.043607594 3.99E-10 9.398900609 0.494787297 NITSFCPDTPS(ph)EKTAK ddPTM_A459_MK2206_30min_R1 1 NITSFCPDTPSEKTAK 16 1 A9QM74 A9QM74 KPNA7 Importin subunit alpha-8 1 NIT(0.003)S(0.003)FCPDT(0.475)PS(0.518)EKTAK 89.877 0.007044 42003000 5384.8 5403.2 5420.1 4464.5 5328.9 5443.5 4744.8 5740.5 4014.5 2784.2 TRUE FALSE 4926.794483 5051.450698 5052.198713 4808.356564 5116.638629 5751.706266 4428.283049 5690.311414 4431.821641 3129.127716 1.574494534 1.614331902 1.614570952 1.536644394 1.635164523 1.838118092 1.415181307 1.818497655 1.416312162 1 11.61154483 -8.563722732 7.277582182 1.000007411 1.626184576 0.730341993 0.117254782 0.26352756 46.28677733 0.105263684 0.027225682 2.73E-09 8.563722732 0.626177165 NITSSS(ph)PER ddPTM_A459_MK2206_30min_R1 3 NITSSSPER 9 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 NIT(0.057)S(0.023)S(0.089)S(0.831)PER;NITSSS(0.999)PER;NIT(0.002)S(0.001)S(0.003)S(0.994)PER 136.81 0.002608 111742900 20942.2 21204.9 21580.5 18824.9 20175.6 19360.6 20789.9 18468.9 17283 15315 TRUE FALSE 19160.95592 19824.45716 20115.67579 20274.79706 19371.96313 20456.78044 19403.0437 18307.42835 19079.6297 17212.33782 1.113210542 1.151758544 1.168677724 1.177922329 1.12546961 1.188495174 1.127275325 1.063622417 1.108485663 1 14.07115544 -8.40735668 0.737610293 1.003888643 1.156430702 0.715041903 0.02884703 0.353191593 0.438143736 0.027969427 0.011017962 3.91E-09 8.40735668 0.152542059 NITSSS(ph)PER ddPTM_A459_MK2206_30min_R2 3 NITSSSPER 9 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 NIT(0.008)S(0.003)S(0.01)S(0.979)PER;NITSSS(0.999)PER;NITSSS(0.999)PER 136.81 0.002608 143971000 390402 416860 409180 416970 439150 434660 480620 365550 393080 409190 TRUE FALSE 420291.4773 396159.3386 422821.857 382902.2172 421906.7644 451201.2909 417514.0167 413328.6401 427269.3879 395838.1638 1.061776038 1.000811379 1.068168498 0.967320113 1.065856714 1.139863035 1.054759381 1.044185927 1.079404229 1 18.59455119 -6.482834634 24.98148302 1.069961288 1.024774039 0.165454161 0.042299955 821.8397237 512703.7111 0.012744627 0.014449203 3.29E-07 6.482834634 -0.045187249 NIYAFMGT(ph)PVQK ddPTM_A459_MK2206_30min_R1 2 NIYAFMGTPVQK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 NIYAFMGT(1)PVQK;NIYAFMGT(1)PVQK 124.47 0.0071197 41244000 15140.2 15651.4 12363.4 13178.3 11933.9 12286.6 10977.5 10180.7 9897.7 9003.4 TRUE FALSE 13852.44649 14632.49102 11524.20685 14193.29495 11458.54749 12982.25667 10245.211 10091.69121 10926.60133 10118.80916 1.368979913 1.446068483 1.138889633 1.402664555 1.13240079 1.282982658 1.01249177 0.997320045 1.079830754 1 13.3047519 -6.737900517 0.594264564 0.98846626 1.386499448 0.656795393 0.096996503 0.513388093 0.395555975 0.0766976 0.089652688 1.83E-07 6.737900517 0.398033189 NIYAFMGT(ph)PVQK ddPTM_A459_MK2206_30min_R2 2 NIYAFMGTPVQK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 NIYAFMGT(1)PVQK;NIY(0.001)AFMGT(0.999)PVQK 115.24 0.012406 21712200 213970 191694 149767 221180 171305 153670 228280 158167 105450 182818 TRUE FALSE 230351.7077 182174.7547 154760.157 203108.8865 164578.705 159518.0195 198306.5618 178839.97 114621.8504 176852.6636 1.302506295 1.030093361 0.875079594 1.148463825 0.93059783 0.901982567 1.121309443 1.011237073 0.648120577 1 17.43218842 -4.784692696 3.582121478 0.964328873 1.340207816 0.38076971 0.132391707 0.29453308 6.375372726 0.032869236 0.298212412 1.64E-05 4.784692696 0.375878943 NIYS(ph)EELR ddPTM_A459_MK2206_30min_R2 1 NIYSEELR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;H0YAB0;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 NIYS(1)EELR 83.862 0.037877 4952900 23882 24098 19035 25601 25726 28499 22188 16731 21978 25902 TRUE FALSE 25710.42428 22901.32836 19669.6174 23509.31641 24715.86798 29583.54942 19274.68895 18917.79915 23889.60671 25056.81986 1.026084891 0.913975855 0.785000551 0.938240229 0.986392851 1.180658582 0.769239235 0.754996015 0.953417347 1 14.6129157 NIYSEELR ddPTM_A459_MK2206_30min_R1 1 NIYSEELR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;H0YAB0;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 145.16 0.028147 17403000 2801.8 3077.6 2525.4 2470.3 3127 2425.4 2754.5 2542.9 2440.8 1875.9 FALSE TRUE 2563.492197 2877.247681 2353.982884 2660.562934 3002.444968 2562.724052 2570.752331 2520.667693 2694.529894 2108.300654 1.215904474 1.36472361 1.116530927 1.261946643 1.424106644 1.21554013 1.219348069 1.195592141 1.278057704 1 11.0418649 -12.87085497 0.326492668 0.264356804 1.267287928 0.461072846 0.082610636 94.9059539 2.274837359 47.520031 0.07260381 1.35E-13 12.87085497 1.002931124 NIYSEELR ddPTM_A459_MK2206_30min_R2 1 NIYSEELR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;H0YAB0;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 145.16 0.028147 4810400 20561 22578 19325 26195 18351 23777 28242 25673 22348 25883 FALSE TRUE 22135.16597 21456.80935 19969.28585 24054.78471 17630.44753 24681.8504 24533.79148 29028.54925 24291.78864 25038.43983 0.884047334 0.856954726 0.797545134 0.960714201 0.704135228 0.985758321 0.979845056 1.159359347 0.970179804 1 14.61185705 -6.953710271 10.22360906 1.032423267 0.845573012 0.569517335 0.078091978 0.314760191 67.47500646 0.026399117 0.023265562 1.11E-07 6.953710271 -0.186850256 NKAGT(ph)PVSELTK ddPTM_A459_MK2206_30min_R1 1 NKAGTPVSELTK 12 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 NKAGT(0.918)PVS(0.081)ELT(0.001)K 143.58 0.0084365 8910500 2972.1 2943.9 3045.7 3314.2 3094.7 2153.1 2378.5 3446.1 1908 1278.1 TRUE FALSE 2719.307288 2752.251575 2838.96637 3569.460258 2971.431546 2275.006661 2219.834605 3415.971111 2106.343428 1436.440677 1.893087081 1.916021746 1.976389568 2.484933986 2.068607213 1.583780449 1.545371584 2.378080185 1.466362977 1 10.4882827 -6.752050318 24.34985066 1.677764839 2.077470357 0.294407314 0.354576358 220.702471 572374.3617 0.117413182 0.115831099 1.77E-07 6.752050318 0.399705518 NKAMS(ph)TCTTR ddPTM_A459_MK2206_30min_R1 1 NKAMSTCTTR 10 1 A0A096LPK9;Q8N0Y3 A0A096LPK9 OR4N4 Olfactory receptor;Olfactory receptor 4N4 1 NKAMS(0.569)T(0.399)CT(0.016)T(0.016)R 77.192 0.030585 5356600 1086.9 1024.7 848.48 1038.5 1121.2 873.93 1152.8 788.38 829.2 866.54 TRUE FALSE 994.4534475 957.9918438 790.8875416 1118.48545 1076.54023 923.4111614 1075.898815 781.4872768 915.3983073 973.8935172 1.021111066 0.983672061 0.812088311 1.148467908 1.105398291 0.948164399 1.104739683 0.80243606 0.93993675 1 9.927620231 -7.758169875 24.99999737 0.903389816 1.014181381 0.178547586 0.100793752 139.9189687 1069905.094 0.050458304 0.027567323 1.75E-08 7.758169875 0.110791565 NKDQGTYEDYVEGLR ddPTM_A459_MK2206_30min_R2 4 NKDQGTYEDYVEGLR 15 1 P60660-2;F8W1R7;G8JLA2;G3V1V0;P60660;J3KND3;B7Z6Z4;G3V1Y7;F8VPF3;F8VZU9;F8W180 P60660-2 MYL6 Myosin light polypeptide 6 0 ;;; 148.7 0.00084406 60549300 118586 150690 130750 142468 170304 122566 160332 115568 125269 138264 FALSE TRUE 127665.0353 143206.9537 135109.1397 130827.9087 163617.0093 127230.335 139280.2158 130673.1344 136164.6712 133752.457 0.954487403 1.070686527 1.010143236 0.97813462 1.22328227 0.951237367 1.041328279 0.97697745 1.018034915 1 17.02920587 -9.927359617 8.337440395 0.999999942 1.027197822 0.008926745 0.075432715 0 0 0.070486174 0.017095408 1.18E-10 9.927359617 0.02719788 NKDQSEQETSDADQHVTSNAS(ph)DSESSYR ddPTM_A459_MK2206_30min_R1 1 NKDQSEQETSDADQHVTSNASDSESSYR 28 1 A0A590UJ08;A0A0C4DFT3;A0A590UJD9;Q12959-4;Q12959-2 A0A590UJ08 DLG1 Disks large homolog 1 1 NKDQSEQETSDADQHVT(0.005)S(0.049)NAS(0.901)DS(0.037)ES(0.006)S(0.002)YR 120.69 2.19E-12 2593700 912.6 458.61 718.66 355.36 739.53 791.93 800.46 700.32 692.73 578.31 TRUE FALSE 834.9785777 428.7544056 669.8793615 382.7298888 710.0729541 836.7683922 747.0627739 694.1971761 764.7417625 649.9554088 1.284670558 0.659667417 1.030654338 0.58885561 1.092494877 1.287424308 1.149406196 1.068068927 1.176606506 1 9.344196933 -6.498721882 24.62476595 1.14677292 0.878950968 0.270361745 0.191906042 742.8386978 757227.8272 0.056031643 0.06318326 3.17E-07 6.498721882 -0.267821952 NKDQSEQETSDADQHVTSNAS(ph)DSESSYR ddPTM_A459_MK2206_30min_R2 3 NKDQSEQETSDADQHVTSNASDSESSYR 28 1 A0A590UJ08;A0A0C4DFT3;A0A590UJD9;Q12959-4;Q12959-2 A0A590UJ08 DLG1 Disks large homolog 1 1 NKDQSEQETSDADQHVT(0.007)S(0.055)NAS(0.925)DS(0.008)ES(0.004)S(0.002)YR;NKDQSEQETSDADQHVT(0.048)S(0.145)NAS(0.394)DS(0.2)ES(0.091)S(0.114)Y(0.009)R;NKDQSEQETSDADQHVT(0.057)S(0.221)NAS(0.634)DS(0.052)ES(0.026)S(0.011)YR 102.19 1.95E-07 23275000 45347.2 52851 47292.9 57499 53489 48799 66518 48120.6 43837.4 50936.6 TRUE FALSE 48819.0165 50226.49619 48869.62168 52801.14777 51388.7531 50656.08014 57784.1067 54410.12764 47650.29781 49274.54291 0.99075534 1.019319373 0.991782344 1.071570524 1.042906744 1.028037545 1.17269696 1.104223894 0.967036831 1 15.58855487 -5.762557067 24.99994984 1.062803447 1.002489047 0.16712953 0.053967342 48.84375457 1092568.746 0.015399003 0.024382143 1.73E-06 5.762557067 -0.060314401 NKDSGSDTASAIIPS(ph)TTPSVDSDDESVVK ddPTM_A459_MK2206_30min_R1 2 NKDSGSDTASAIIPSTTPSVDSDDESVVK 29 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPS(0.464)T(0.464)T(0.041)PS(0.027)VDS(0.004)DDES(0.001)VVK;NKDSGSDTASAIIPS(0.353)T(0.273)T(0.03)PS(0.186)VDS(0.149)DDES(0.008)VVK 105.04 9.97E-11 19935500 5977.2 7325.4 6998.6 7195.4 6534.2 4934.2 5636.8 7413.1 5685.7 5323.3 TRUE FALSE 5468.807752 6848.515129 6523.554531 7749.590955 6273.928978 5213.57014 5260.779357 7348.288048 6276.748861 5982.790593 0.914089783 1.144702463 1.090386573 1.295313756 1.04866264 0.871427816 0.879318652 1.228237548 1.049133973 1 12.54660285 -6.513964102 24.98037256 1.006222256 1.119533948 0.132589543 0.126504489 886.9764824 2485466.933 0.042851308 0.045100471 3.06E-07 6.513964102 0.113311692 NKDSGSDTASAIIPSTTPS(ph)VDSDDESVVK ddPTM_A459_MK2206_30min_R1 1 NKDSGSDTASAIIPSTTPSVDSDDESVVK 29 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPS(0.071)T(0.044)T(0.013)PS(0.871)VDS(0.001)DDESVVK 148.84 7.62E-16 11089000 6728.3 6662.6 6969.4 6938.8 5632.8 4305.9 5421.8 7240.9 5159.8 5039.7 TRUE FALSE 6156.022753 6228.863529 6496.336546 7473.227578 5408.433648 4549.696337 5060.121615 7177.593575 5696.179675 5664.056084 1.086857662 1.099717841 1.146940717 1.319412708 0.954869367 0.803257643 0.893374207 1.267217956 1.005671482 1 12.46761984 -6.296223852 24.93808676 0.986851067 1.157531883 0.320199728 0.125401317 823.7994399 590605.5744 0.042742037 0.04846701 5.06E-07 6.296223852 0.170680816 NKDSGSDTASAIIPSTTPSVDS(ph)DDESVVK ddPTM_A459_MK2206_30min_R1 1 NKDSGSDTASAIIPSTTPSVDSDDESVVK 29 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPS(0.204)T(0.204)T(0.058)PS(0.204)VDS(0.316)DDES(0.014)VVK 96.626 8.84E-08 7728800 2876.5 3262.7 3142.7 2843.1 2039.7 2093 1848.2 2527.1 2521.5 1942.4 TRUE FALSE 2631.83857 3050.297637 2929.38228 3062.076055 1958.45443 2211.503851 1724.90995 2505.005831 2783.618948 2183.039176 1.205584672 1.397271139 1.341882597 1.402666561 0.897122897 1.013039012 0.790141546 1.147485514 1.27511177 1 11.09212231 -6.255207329 24.9675634 1.015968413 1.341526344 0.578088306 0.132349362 375.8270858 1505680.801 0.04148635 0.052198698 5.56E-07 6.255207329 0.325557931 NKDSGSDTASAIIPSTTPSVDSDDES(ph)VVK ddPTM_A459_MK2206_30min_R2 1 NKDSGSDTASAIIPSTTPSVDSDDESVVK 29 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPS(0.001)T(0.004)T(0.001)PS(0.028)VDS(0.36)DDES(0.606)VVK 78.228 0.0028554 0 9361.5 12089 13287 12695 12558 8996 13442 7397.2 12244 12240 TRUE FALSE 10078.22364 11488.67784 13729.98195 11657.77789 12064.90982 9338.349084 11677.04925 8364.039438 13308.96099 11840.6098 0.851157483 0.970277547 1.159567132 0.984558911 1.018943283 0.788671296 0.986186476 0.706385868 1.12400976 1 13.53145576 NKELYEINPPEIS(ph)EEIIGSPIPEPR ddPTM_A459_MK2206_30min_R1 2 NKELYEINPPEISEEIIGSPIPEPR 25 1 Q86YS7-3;Q86YS7;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7-3 C2CD5 C2 domain-containing protein 5 1 NKELYEINPPEIS(0.9)EEIIGS(0.1)PIPEPR;NKELYEINPPEIS(0.871)EEIIGS(0.129)PIPEPR 98.76 2.76E-06 11292900 1889.87 1831.74 1727.18 1722.35 1986.82 1295.02 1757.73 2125.04 1361.17 1233.2 TRUE FALSE 1729.126632 1712.493393 1609.943834 1855.005695 1907.680752 1368.342913 1640.475039 2106.460999 1502.668492 1385.978126 1.247585802 1.235584719 1.16159397 1.33840907 1.376414762 0.98727598 1.183622604 1.519837117 1.084193512 1 10.43668877 NKELYEINPPEISEEIIGS(ph)PIPEPR ddPTM_A459_MK2206_30min_R1 1 NKELYEINPPEISEEIIGSPIPEPR 25 1 Q86YS7-3;Q86YS7;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7-3 C2CD5 C2 domain-containing protein 5 1 NKELYEINPPEIS(0.439)EEIIGS(0.561)PIPEPR 152.1 1.92E-10 6436800 2589.7 2067.4 1861.8 2440 2306.6 1635.2 2250.8 2144.4 1907.6 1261.4 TRUE FALSE 2369.432416 1932.811884 1735.426203 2627.929223 2214.723238 1727.783611 2100.653239 2125.651737 2105.901846 1417.671755 1.671354746 1.363370524 1.224138237 1.853693715 1.562225691 1.218747291 1.481762779 1.499396267 1.485465051 1 10.46930782 -10.64232409 6.432421253 0.999998962 1.478935218 0.389358991 0.181892896 2.75E-06 3.76E-07 0.178759655 0.04335549 2.28E-11 10.64232409 0.478936256 NKFGS(ph)ADNIPNLK ddPTM_A459_MK2206_30min_R2 1 NKFGSADNIPNLK 13 1 Q6N039;E9PC87;O94876-2;O94876 Q6N039 DKFZp686H13261;TMCC1 Transmembrane and coiled-coil domains protein 1 1 NKFGS(1)ADNIPNLK 65.905 0.040977 3643400 33619 22189 21526 23149 19424 19390 34996 20193 24180 22728 TRUE FALSE 36192.89649 21087.12653 22243.6661 21257.65265 18661.31616 20127.90004 30400.98316 22832.29443 26283.13269 21986.38722 1.646150235 0.959099206 1.011701735 0.966855193 0.848766829 0.915471006 1.382718446 1.038474134 1.195427536 1 14.42432294 -4.757097969 24.97126778 1.034985281 1.646151153 0.617679847 0.144152626 91.35579242 525399.1996 0.037951569 0.290039996 1.75E-05 4.757097969 0.611165872 NKHEAMITDLEER ddPTM_A459_MK2206_30min_R2 1 NKHEAMITDLEER 13 1 P35579 P35579 MYH9 Myosin-9 0 78.287 0.032975 3108800 30399 40266 36326 39443 39792 32502 42918 30493 31786 36462 FALSE TRUE 32726.37081 38266.44899 37537.09071 36220.38073 38229.56614 33738.88639 37282.81505 34478.5398 34550.68882 35272.24793 0.927822091 1.084888297 1.064210333 1.026880419 1.083842635 0.956527819 1.057001389 0.97749766 0.97954315 1 15.1062459 -7.77624233 24.88476673 0.983890281 1.031533403 0.1374879 0.049012461 425.1827065 714750.2648 0.025710939 0.01243318 1.67E-08 7.77624233 0.047643122 NKPGPNIES(ph)GNEDDDASFK ddPTM_A459_MK2206_30min_R1 6 NKPGPNIESGNEDDDASFK 19 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 NKPGPNIES(0.999)GNEDDDAS(0.001)FK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(0.999)GNEDDDAS(0.001)FK;NKPGPNIES(0.999)GNEDDDAS(0.001)FK 152.27 9.73E-06 2947765000 46216.68 56580.02 53916.15 46975.65 35811.39 32178.87 37823.19 41847.77 46301.5 41231.61 TRUE FALSE 42285.70867 52896.65041 50256.47196 50593.7227 34384.9465 34000.80981 35300.07401 41481.89936 51114.70662 46339.69313 0.912515941 1.141497641 1.084523193 1.091800987 0.742019297 0.733729715 0.761767539 0.895169919 1.103043701 1 15.49996087 -6.246122867 24.77455688 0.854892884 1.065502454 0.346860925 0.122712669 781.1044377 1263440.873 0.038003639 0.048869867 5.67E-07 6.246122867 0.210609571 NKPGPNIES(ph)GNEDDDASFK ddPTM_A459_MK2206_30min_R2 8 NKPGPNIESGNEDDDASFK 19 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 NKPGPNIES(0.999)GNEDDDAS(0.001)FK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(0.999)GNEDDDAS(0.001)FK;NKPGPNIES(0.989)GNEDDDAS(0.011)FK;NKPGPNIES(0.999)GNEDDDAS(0.001)FK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(0.999)GNEDDDAS(0.001)FK;NKPGPNIES(0.995)GNEDDDAS(0.005)FK 149 1.85E-05 6265526000 756377 734589 775502 654302 714758 447816 886278 614776 549948 801995 TRUE FALSE 814285.8047 698110.3785 801356.8496 600843.4336 686693.0095 464857.9517 769908.634 695129.334 597781.483 775825.9688 1.049572762 0.899828578 1.032908 0.77445646 0.885112174 0.599178128 0.992372858 0.895986164 0.770509762 1 19.56537354 -5.757649936 24.99993203 0.83856233 0.984675671 0.253619227 0.116175191 136.3806134 899720.9912 0.031090506 0.05134989 1.75E-06 5.757649936 0.146113342 NKPGPNIESGNEDDDASFK ddPTM_A459_MK2206_30min_R1 1 NKPGPNIESGNEDDDASFK 19 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 0 106.31 0.0023321 5001900 4458.3 2306.2 3055.5 3890.6 3426.8 4421.9 3450.7 3092.5 2811.2 1979 FALSE TRUE 4079.098174 2156.065961 2848.101173 4190.254686 3290.3033 4672.264157 3220.510099 3065.462599 3103.4343 2224.173461 1.833983835 0.969378512 1.280521157 1.883960384 1.479337542 2.100674358 1.447958154 1.378247989 1.395320264 1 11.11905359 -8.641178826 1.210537221 1.007330944 1.55623686 0.235385214 0.305811558 0.998289869 3.066239272 0.302959988 0.093582466 2.28E-09 8.641178826 0.548905915 NKPLEQS(ph)VEDLSK ddPTM_A459_MK2206_30min_R1 4 NKPLEQSVEDLSK 13 1 O95466;O95466-2;O95466-3 O95466 FMNL1 Formin-like protein 1 1 NKPLEQS(0.995)VEDLS(0.005)K;NKPLEQS(1)VEDLSK;NKPLEQS(0.998)VEDLS(0.002)K;NKPLEQS(0.999)VEDLS(0.001)K 145.52 0.0013875 74254000 17793.4 17202.6 15381 13267.8 10885.2 12648.5 16477.7 16216.5 20150.3 20918.9 TRUE FALSE 16279.97789 16082.70761 14336.98057 14289.68825 10451.61943 13364.64714 15378.5027 16074.72085 22244.99579 23510.49126 0.692455879 0.684065145 0.609812037 0.607800496 0.444551299 0.56845461 0.65411235 0.683725434 0.946173159 1 14.52101706 -8.225433814 2.080845337 1.007668009 0.602811489 0.827682256 0.065804128 0.136953407 1.07107722 0.068096876 0.020105597 5.95E-09 8.225433814 -0.40485652 NKPLEQS(ph)VEDLSK ddPTM_A459_MK2206_30min_R2 1 NKPLEQSVEDLSK 13 1 O95466;O95466-2;O95466-3 O95466 FMNL1 Formin-like protein 1 1 NKPLEQS(1)VEDLSK 82.755 0.01782 36997000 106640 90633 85093 74777 83518 58368 112850 77710 69106 100620 TRUE FALSE 114804.4404 86132.29701 87929.95815 68667.4799 80238.66368 60589.23514 98032.65944 87866.96382 75116.71496 97336.77764 1.179455938 0.884889546 0.903358014 0.705462843 0.824340662 0.622470115 1.007149218 0.902710835 0.771719763 1 16.57069739 -2.948380181 11.66540769 0.868195998 0.998922694 0 0.153089386 0 0 0.03501471 0 0.001126211 2.948380181 0.130726696 NKPLS(ph)PIKLTPTSVLDYFGTGSVQR ddPTM_A459_MK2206_30min_R1 1 NKPLSPIKLTPTSVLDYFGTGSVQR 25 2 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 NKPLS(0.999)PIKLT(0.001)PTSVLDYFGTGSVQR 62.605 0.0016573 28751000 3389.6 3745.6 3264.5 3594.8 2771.6 2567.5 1751.7 2533.5 1708.4 967.73 TRUE FALSE 3101.296721 3501.760759 3042.914835 3871.672119 2661.201303 2712.869631 1634.847289 2511.349877 1885.994294 1087.619698 2.851453247 3.219655514 2.797774663 3.559766456 2.446812343 2.494318221 1.503142405 2.309033093 1.734056763 1 10.08695847 -6.89768634 1.321076914 1.694499791 3.092765879 0.72573804 0.392090958 0.233274066 0.843768432 0.192686809 0.153790046 1.27E-07 6.89768634 1.398266088 NKPLSPIKLTPTSVLDYFGTGSVQR ddPTM_A459_MK2206_30min_R1 1 NKPLSPIKLTPTSVLDYFGTGSVQR 25 2 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 0 91.733 2.22E-05 3006000 1277.6 1560.5 1548 2188.2 1057.7 1110.6 980.98 1183.3 802.9 441.77 FALSE TRUE 1168.933411 1458.911166 1442.926073 2356.735543 1015.569569 1173.481212 915.5406141 1172.954533 886.3643282 496.4998028 2.354348188 2.938392237 2.906196669 4.746699857 2.045458152 2.363507912 1.843989885 2.362447127 1.785225942 1 8.955649334 -6.472157845 24.99999082 1.982271065 3.217104195 0.481667538 0.676094294 338.1079087 166651.0113 0.208437846 0.236343285 3.37E-07 6.472157845 1.23483313 NKPPPPPPASASPSAVPNGPQS(ph)PK ddPTM_A459_MK2206_30min_R1 1 NKPPPPPPASASPSAVPNGPQSPK 24 1 H0Y7W6 H0Y7W6 FNBP1 1 NKPPPPPPASASPSAVPNGPQS(1)PK 85.157 6.02E-05 8497200 3325 3067.8 3161.2 3056.3 3279.5 3516.7 4055.1 3589.4 3295.6 2857.6 TRUE FALSE 3042.19129 2868.085662 2946.626552 3291.696756 3148.870571 3715.812515 3784.591678 3558.018254 3638.189413 3211.621062 0.947244781 0.893033645 0.917488862 1.024933108 0.980461427 1.156989708 1.178405424 1.10785743 1.132820262 1 11.64908596 -6.349072477 1.433258148 1.124018084 0.921000408 0.668746212 0.056473143 0.223585972 0.926354164 0.021592755 0.027774853 4.48E-07 6.349072477 -0.203017676 NKPPPPPPASASPSAVPNGPQS(ph)PK ddPTM_A459_MK2206_30min_R2 1 NKPPPPPPASASPSAVPNGPQSPK 24 1 H0Y7W6 H0Y7W6 FNBP1 1 NKPPPPPPASASPSAVPNGPQS(1)PK 122.94 8.20E-08 12770000 70882 63077 72222 47560 56279 33148 76820 44307 45008 77228 TRUE FALSE 76308.78042 59944.6879 74629.84543 43674.19586 54069.20368 34409.47037 66733.44172 50098.07703 48922.71448 74708.05668 1.021426387 0.802385855 0.998953108 0.584598205 0.72373993 0.460585804 0.893256292 0.670584663 0.654851922 1 16.18897621 -5.755385516 24.99989325 0.696292377 0.927068214 0.316081949 0.152254567 164.8491434 680748.1277 0.039285899 0.065871211 1.76E-06 5.755385516 0.230775836 NKPYIS(ph)WPSSGGSEPSVTVPLR ddPTM_A459_MK2206_30min_R2 1 NKPYISWPSSGGSEPSVTVPLR 22 1 Q9Y5S2 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta 1 NKPY(0.397)IS(0.6)WPS(0.002)S(0.001)GGSEPSVTVPLR 52.03 0.022663 3028100 6835.7 11761 14849 10646 11361 9098.7 9019.5 10656 8654.4 7297.4 TRUE FALSE 7359.046448 11176.96584 15344.05825 9776.187745 10914.91006 9444.957404 7835.228816 12048.77579 9407.144068 7059.286436 1.042463217 1.583299664 2.173599044 1.384869113 1.546177529 1.337947892 1.109917962 1.706797974 1.332591354 1 12.78530665 -6.613612461 2.330877901 1.329291966 1.589973187 0.125037547 0.313519386 0.690702792 7.635646305 0.118541554 0.120135853 2.43E-07 6.613612461 0.260681221 NKQDDDLNCEPLS(ph)PHNITPEPVSK ddPTM_A459_MK2206_30min_R1 3 NKQDDDLNCEPLSPHNITPEPVSK 24 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73;F8WE35;F5H8I0;F5H2W9;F5H2H9;F5GZ10;F5H502;F5H1K9 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 NKQDDDLNCEPLS(0.973)PHNIT(0.026)PEPVS(0.002)K;NKQDDDLNCEPLS(0.982)PHNIT(0.016)PEPVS(0.001)K;NKQDDDLNCEPLS(1)PHNITPEPVSK 101.39 2.40E-06 49565600 8777.8 9645 9527.3 8872.3 8376.3 6817.7 7007.5 7981.9 8536.9 7931.8 TRUE FALSE 8031.202016 9017.108747 8880.613421 9555.646083 8042.654234 7203.712282 6540.042461 7912.11509 9424.341305 8914.451266 0.900919392 1.01151585 0.996204158 1.07192757 0.902204072 0.808093742 0.733644985 0.88756053 1.057198141 1 13.12193028 -6.442877222 7.580197025 0.877342124 0.995865739 0.189757369 0.093807108 0.424326903 35.7872027 0.030544964 0.034564873 3.61E-07 6.442877222 0.118523615 NKQDDDLNCEPLS(ph)PHNITPEPVSK ddPTM_A459_MK2206_30min_R2 4 NKQDDDLNCEPLSPHNITPEPVSK 24 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73;F8WE35;F5H8I0;F5H2W9;F5H2H9;F5GZ10;F5H502;F5H1K9 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 NKQDDDLNCEPLS(0.997)PHNIT(0.002)PEPVSK;NKQDDDLNCEPLS(1)PHNITPEPVSK;NKQDDDLNCEPLS(0.999)PHNIT(0.001)PEPVSK;NKQDDDLNCEPLS(0.999)PHNIT(0.001)PEPVSK 94.389 6.97E-06 85859700 218955 243317 214657 229242 227467 165426 264065 204374 174295 249185 TRUE FALSE 235718.3631 231234.2316 221813.5572 210512.1953 218535.5027 171721.4023 229392.9483 231086.3835 189454.864 241054.1139 0.977864926 0.959262748 0.920181588 0.873298497 0.906582755 0.712376983 0.951624283 0.958649408 0.785943293 1 17.87899753 -5.408328823 1.963290908 0.878542209 0.975300731 0.14945552 0.079786669 0.663387064 4.813127682 0.022899199 0.07137695 3.91E-06 5.408328823 0.096758522 NKS(ph)NEDQSMGNWQIK ddPTM_A459_MK2206_30min_R1 2 NKSNEDQSMGNWQIK 15 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 NKS(0.988)NEDQS(0.012)MGNWQIK;NKS(0.88)NEDQS(0.12)MGNWQIK 78.225 0.01836 78761000 8967 10020.5 10362 8156.5 6435.3 6154.9 7019.3 7367 9431.7 8624.6 TRUE FALSE 8204.309562 9368.163629 9658.65631 8784.715043 6178.968374 6503.385119 6551.055304 7302.591096 10412.15897 9693.08056 0.84640889 0.966479497 0.996448575 0.906287221 0.637461779 0.670930679 0.675848639 0.753381864 1.074184714 1 13.24273953 -6.024734204 22.95849548 0.776333276 0.941435542 0.155133412 0.138724515 398.9247791 370285.6232 0.041629944 0.054090056 9.45E-07 6.024734204 0.165102266 NKS(ph)PAAVTEPETNK ddPTM_A459_MK2206_30min_R2 1 NKSPAAVTEPETNK 14 1 B7ZBC9;B7ZBC8;O75449 B7ZBC9 KATNA1 Katanin p60 ATPase-containing subunit A1 1 NKS(1)PAAVTEPETNK 82.755 0.016055 8616200 50905 46698 44625 45708 30903 24985 66496 43226 19439 57084 TRUE FALSE 54802.32594 44379.04523 46112.77523 41973.51019 29689.59294 25935.82168 57764.99532 48875.78662 21129.76908 55221.35375 0.992411852 0.803657321 0.835053328 0.760095639 0.537646959 0.469670153 1.046062644 0.885088526 0.382637651 1 15.75293864 -4.589153706 1.097356609 0.722291298 1.198744846 0.122779266 0.207643785 5.46491579 4.137734858 0.066482492 3.341838321 2.58E-05 4.589153706 0.476453548 NLAPHHAS(ph)PDPPAPPASASDPHR ddPTM_A459_MK2206_30min_R2 3 NLAPHHASPDPPAPPASASDPHR 23 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 NLAPHHAS(0.998)PDPPAPPAS(0.001)AS(0.001)DPHR;NLAPHHAS(1)PDPPAPPASASDPHR;NLAPHHAS(1)PDPPAPPASASDPHR 65.954 0.0021677 26506300 55518 70470 70581 78102 69724 63701 71162 56268 50863 60656 TRUE FALSE 59768.50077 66970.56227 72934.13531 71720.81676 66986.28543 66125.18619 61818.34392 63622.4208 55286.9718 58676.79969 1.018605328 1.14134654 1.242980798 1.222302804 1.141614502 1.126939208 1.053539802 1.084285802 0.942228821 1 15.84050257 -7.612054472 1.118693847 0.982226452 1.160962498 0.534758235 0.06229895 0.420297287 0.966069714 0.053964645 0.023404954 2.44E-08 7.612054472 0.178736046 NLAS(ph)PEGTLATLGLK ddPTM_A459_MK2206_30min_R1 1 NLASPEGTLATLGLK 15 0 Q8TDJ6-3;Q8TDJ6;Q8TDJ6-2 Q8TDJ6-3 DMXL2 DmX-like protein 2 1 NLAS(0.954)PEGT(0.045)LAT(0.002)LGLK 85.493 0.020662 9911800 1936.4 1612.4 1949.4 1709.2 1869.5 1765.9 1723.9 1692.5 1676.3 1675.1 TRUE FALSE 1771.699012 1507.432467 1817.080159 1840.84288 1795.033856 1865.883732 1608.901776 1677.702651 1850.557384 1882.624034 0.941079567 0.800708181 0.96518483 0.977806958 0.953474418 0.991107995 0.85460599 0.891151191 0.982967045 1 10.8785292 -7.585765838 0.009992017 1.878755336 2.55E-06 0.127891809 0.058476382 2905.378922 24.05918309 2241.620067 2278.615282 2.60E-08 7.585765838 -1.878752789 NLAS(ph)PEGTLATLGLK ddPTM_A459_MK2206_30min_R2 1 NLASPEGTLATLGLK 15 0 Q8TDJ6-3;Q8TDJ6;Q8TDJ6-2 Q8TDJ6-3 DMXL2 DmX-like protein 2 1 NLAS(0.806)PEGT(0.193)LAT(0.001)LGLK 90.259 0.01575 10106000 31816 37580 37163 36454 35342 30786 44967 26777 31287 37373 TRUE FALSE 34251.85742 35713.83185 38401.99587 33475.59159 33954.2955 31957.5828 39062.77888 30276.84584 34008.28671 36153.52207 0.947400294 0.987838246 1.062192386 0.925928918 0.939169784 0.883941065 1.080469527 0.837452179 0.940663171 1 15.14184858 -5.806824023 24.99200934 0.940162736 0.998013672 0.125233107 0.066305997 242.8966874 133755.1169 0.018238441 0.027052102 1.56E-06 5.806824023 0.057850937 NLAS(ph)PNCVKPK ddPTM_A459_MK2206_30min_R1 2 NLASPNCVKPK 11 1 Q8NG27-3;Q8NG27 Q8NG27-3 PJA1 E3 ubiquitin-protein ligase Praja-1 1 NLAS(1)PNCVKPK;NLAS(1)PNCVKPK 118.24 0.025475 22091500 7915.7 7624.8 7497.8 6213.8 6951 5404.1 5495.3 6072.2 5486.8 4949.9 TRUE FALSE 7242.428148 7128.424134 6988.870226 6692.387953 6674.126951 5710.075472 5128.718564 6019.111396 6057.172495 5563.130982 1.301861878 1.281369099 1.256283602 1.202989463 1.199706959 1.026413991 0.921912243 1.081964709 1.088806378 1 12.44168136 -6.627865324 2.457938012 1.020489288 1.261433266 0.839457005 0.049584176 0.121072996 1.488202063 0.019790896 0.019861634 2.36E-07 6.627865324 0.240943978 NLASPEGT(ph)LATLGLK ddPTM_A459_MK2206_30min_R2 1 NLASPEGTLATLGLK 15 0 Q8TDJ6-3;Q8TDJ6;Q8TDJ6-2 Q8TDJ6-3 DMXL2 DmX-like protein 2 1 NLAS(0.203)PEGT(0.796)LAT(0.001)LGLK 116.78 0.0051861 9112600 49929 51854 43347 53373 53108 52290 56135 36242 47242 55386 TRUE FALSE 53751.60263 49279.00576 44792.16735 49012.25517 51022.71307 54279.93259 48764.40707 40978.95384 51351.02377 53578.75936 1.003225966 0.919748915 0.836006057 0.914770251 0.952293664 1.013086776 0.910144387 0.76483581 0.958421292 1 15.70937355 -8.521289445 24.96888489 1.000000021 0.912863834 0.13753809 0.069023556 268.9585307 4225474.075 0.070010777 0.018076705 3.01E-09 8.521289445 -0.087136187 NLATS(ph)ADTPPSTVPGTGK ddPTM_A459_MK2206_30min_R2 1 NLATSADTPPSTVPGTGK 18 0 J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2;Q96Q15 J3KRA9 SMG1 Serine/threonine-protein kinase SMG1 1 NLAT(0.22)S(0.779)ADT(0.001)PPSTVPGTGK 136.35 0.00035209 4103500 16268 19428 19316 20709 23136 20888 21185 17649 19004 19341 TRUE FALSE 17513.49059 18463.23377 19959.9858 19017.00846 22227.56439 21682.90748 18403.38405 19955.7849 20656.93357 18709.90475 0.936054503 0.986816021 1.066813865 1.016413964 1.188010558 1.158899939 0.983617196 1.066589337 1.104064069 1 14.19151459 -5.064791422 1.429841065 1.081712797 0.91366609 0.356570554 0.061817999 0.833447808 2.250942979 0.019150176 0.173228565 8.61E-06 5.064791422 -0.168046706 NLATSADT(ph)PPSTVPGTGK ddPTM_A459_MK2206_30min_R1 2 NLATSADTPPSTVPGTGK 18 0 J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2;Q96Q15 J3KRA9 SMG1 Serine/threonine-protein kinase SMG1 1 NLATS(0.017)ADT(0.952)PPS(0.027)T(0.003)VPGTGK;NLATS(0.001)ADT(0.967)PPS(0.024)T(0.008)VPGTGK 235.37 2.41E-19 13138800 8207 7184.4 6095.9 6327.8 6767.9 5663.9 6569 6551.3 6118.5 5837 TRUE FALSE 7508.951553 6716.694254 5682.127292 6815.168252 6498.320212 5984.585123 6130.793996 6494.022675 6754.53997 6560.131627 1.144634282 1.023865775 0.866160561 1.038876754 0.990577717 0.912266013 0.934553504 0.989922618 1.029634824 1 12.67950905 -4.849305551 3.758957904 0.968460197 1.151140227 0.517382445 0.050803432 0.183802558 4.35936883 0.012854526 0.081124503 1.41E-05 4.849305551 0.18268003 NLATSADT(ph)PPSTVPGTGK ddPTM_A459_MK2206_30min_R2 3 NLATSADTPPSTVPGTGK 18 0 J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2;Q96Q15 J3KRA9 SMG1 Serine/threonine-protein kinase SMG1 1 NLAT(0.004)S(0.156)ADT(0.833)PPS(0.004)T(0.003)VPGTGK;NLATS(0.01)ADT(0.975)PPS(0.002)T(0.013)VPGTGK;NLAT(0.003)S(0.08)ADT(0.917)PPS(0.001)T(0.001)VPGTGK 249.49 1.56E-32 22522100 122703 135476 119563 125209 144071 116982 150811 106185 116919 126188 TRUE FALSE 132097.236 128748.4588 123549.1707 114979.0242 138414.0486 121433.832 131009.3345 120063.7441 127088.4033 122070.4959 1.082138932 1.05470579 1.012113286 0.941906751 1.133886183 0.994784457 1.073226856 0.983560714 1.041106636 1 16.89735502 -8.051901765 0.005379109 2.10E-05 2.047678051 0.060562572 0.051707078 11647.91692 62.57796052 11924.15014 11891.75097 8.87E-09 8.051901765 2.047657023 NLATSADTPPST(ph)VPGTGK ddPTM_A459_MK2206_30min_R2 1 NLATSADTPPSTVPGTGK 18 0 J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2;Q96Q15 J3KRA9 SMG1 Serine/threonine-protein kinase SMG1 1 NLAT(0.007)S(0.011)ADT(0.091)PPS(0.309)T(0.582)VPGTGK 127.53 0.001692 7362500 46877 46618 48502 48125 61259 48290 62829 41109 51476 57414 TRUE FALSE 50465.93916 44303.01791 50119.03247 44193.03356 58853.66386 50127.70979 54579.47683 46482.08745 55953.28943 55540.58588 0.908631739 0.797669258 0.902385736 0.795689006 1.059651477 0.90254197 0.982695374 0.836903081 1.007430666 1 15.76125478 -6.243177849 24.9974258 0.954490416 0.850941589 0.402718687 0.067170706 887.2184301 1214475.264 0.018728172 0.024130151 5.71E-07 6.243177849 -0.103548826 NLDDGIDDER ddPTM_A459_MK2206_30min_R1 2 NLDDGIDDER 10 0 P11940;E7ERJ7;P11940-2;A0A087WTT1;E7EQV3;Q9H361;H0YAR2;H0YAP2 P11940 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 0 ; 275.63 2.76E-29 37680000 6902.2 7276.9 7392.8 6934.2 5986.6 6227.6 7455.1 6623.1 7623.4 7691 FALSE TRUE 6315.131645 6803.172487 6890.997334 7468.273285 5748.141045 6580.20133 6957.783882 6565.194935 8415.879711 8643.819144 0.730595069 0.78705632 0.797216742 0.864001567 0.665000152 0.761260876 0.804943251 0.759524792 0.973629778 1 13.07745317 -8.288612501 5.651602017 0.992451633 0.772717991 0.754978496 0.049145134 0.092500912 9.329886456 0.044664103 0.012551555 5.15E-09 8.288612501 -0.219733642 NLDDGIDDERLR ddPTM_A459_MK2206_30min_R1 3 NLDDGIDDERLR 12 1 P11940;E7ERJ7;P11940-2;A0A087WTT1;E7EQV3;Q9H361;H0YAR2;H0YAP2 P11940 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 0 ;; 209.67 1.92E-05 84117800 10858.5 11485.2 11941.3 10997.6 12554.1 9165.7 9898.5 11844.1 6758.5 5887.8 FALSE TRUE 9934.927555 10737.51139 11130.75783 11844.63706 12054.04361 9684.654013 9238.189126 11740.54828 7461.070261 6617.225115 1.50137367 1.622660739 1.682088433 1.789970396 1.821616071 1.463552145 1.396082038 1.774240422 1.127522508 1 12.69201064 -8.365540604 4.721777711 1.012804602 1.630407906 0.733574865 0.137399509 0.119241345 4.010606171 0.140681749 0.036903406 4.31E-09 8.365540604 0.617603304 NLDDGIDDERLR ddPTM_A459_MK2206_30min_R2 3 NLDDGIDDERLR 12 1 P11940;E7ERJ7;P11940-2;A0A087WTT1;E7EQV3;Q9H361;H0YAR2;H0YAP2 P11940 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 0 ;; 151.16 0.0014932 80833000 578146 674610 610195 550490 635470 413365 674440 500394 518923 642590 FALSE TRUE 622409.3023 641109.8484 630538.5967 505513.2061 610518.2548 429095.8947 585885.2179 565797.2139 564057.9845 621622.3409 1.00126598 1.031349432 1.014343525 0.813215956 0.982136926 0.690283901 0.942509912 0.910194465 0.907396577 1 19.24567883 -5.737726818 24.03263222 0.885930787 1.017222816 0.309993904 0.08399151 168.146417 170413.6633 0.021852239 0.037816373 1.83E-06 5.737726818 0.131292029 NLDIERPTYTNLNR ddPTM_A459_MK2206_30min_R1 1 NLDIERPTYTNLNR 14 1 Q9BQE3;F5H5D3;F8VVB9;Q9NY65;Q9NY65-2;C9J2C0;F8VQQ4;P68363;C9JDS9;P68366-2;P68366 Q9BQE3;P68363;P68366-2 TUBA1C;TUBA1B;TUBA8;TUBA1A;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 128.35 0.0032162 157500000 2932.3 3552.6 2834.4 2495.9 3039.2 2962.3 2834.4 2990.5 2761.7 2962.9 FALSE TRUE 2682.892487 3321.325094 2642.008825 2688.13465 2918.142228 3130.022866 2645.322348 2964.354374 3048.788598 3329.966421 0.805681544 0.997404981 0.793404044 0.807255783 0.876327824 0.939956285 0.794399106 0.890205485 0.915561364 1 11.70129191 -8.582579713 1.849939259 0.999201307 0.863351995 0.308620209 0.063738915 0.519064154 3.965926988 0.059943874 0.016919862 2.61E-09 8.582579713 -0.135849312 NLDIERPTYTNLNR ddPTM_A459_MK2206_30min_R2 2 NLDIERPTYTNLNR 14 1 Q9BQE3;F5H5D3;F8VVB9;Q9NY65;Q9NY65-2;C9J2C0;F8VQQ4;P68363;C9JDS9;P68366-2;P68366 Q9BQE3;P68363;P68366-2 TUBA1C;TUBA1B;TUBA8;TUBA1A;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ; 131.32 0.0025335 195537000 165944 158425 168624 181424 171089 161589 207625 137694 159583 152447 FALSE TRUE 178648.8002 150557.8449 174245.84 166601.0789 164371.1862 167738.3826 180363.5881 155691.0786 173463.2409 147472.6669 1.211402791 1.020920338 1.18154668 1.129708185 1.114587467 1.137420148 1.223030626 1.055728372 1.17623994 1 17.17008806 -10.74734987 4.402575951 0.999947724 1.135726337 0.317483012 0.0609556 2.90E-05 5.10E-06 0.054653965 0.013250433 1.79E-11 10.74734987 0.135778613 NLDSAT(ph)SPQNGDQQNGYGDLFPGHK ddPTM_A459_MK2206_30min_R2 1 NLDSATSPQNGDQQNGYGDLFPGHK 25 0 Q92585 Q92585 MAML1 Mastermind-like protein 1 1 NLDS(0.221)AT(0.61)S(0.169)PQNGDQQNGYGDLFPGHK 82.726 0.00019473 3930700 46572 39784 40057 43580 40875 37922 44290 33856 35912 44776 TRUE FALSE 50137.58813 37808.38441 41392.48039 40019.37459 39270.04212 39365.14828 38474.6698 38281.09545 39035.56085 43314.96279 1.157511975 0.87287122 0.955616206 0.92391571 0.906616088 0.908811777 0.888253558 0.883784563 0.901202687 1 15.40257786 -4.755821635 24.99988484 0.912194161 1.157512366 0.803785902 0.035808754 71.38721365 317652.165 0.008416668 0.071987328 1.75E-05 4.755821635 0.245318205 NLDSATS(ph)PQNGDQQNGYGDLFPGHK ddPTM_A459_MK2206_30min_R2 2 NLDSATSPQNGDQQNGYGDLFPGHK 25 0 Q92585 Q92585 MAML1 Mastermind-like protein 1 1 NLDS(0.033)AT(0.253)S(0.714)PQNGDQQNGYGDLFPGHK;NLDS(0.019)AT(0.32)S(0.661)PQNGDQQNGYGDLFPGHK 104.65 2.29E-07 12959600 81230 67100 74479 76685 72632 53955 79657 55435 56895 69429 TRUE FALSE 87449.03126 63767.91157 76962.09269 70419.5902 69780.10273 56008.29533 69197.94021 62680.54484 61843.62426 67163.53742 1.302031349 0.949442421 1.145890995 1.048479471 1.038958122 0.833909253 1.030290287 0.933252584 0.920791647 1 16.0353906 -1.522878745 0.472559565 0.952112411 8.310951004 0.505914557 0.087240775 83.46539086 0.953163744 0.050520127 600.7953897 0.03 1.522878745 7.358838593 NLDSLEEDLDFLR ddPTM_A459_MK2206_30min_R1 2 NLDSLEEDLDFLR 13 0 P61758-2;P61758 P61758-2 VBP1 Prefoldin subunit 3 0 ; 174.46 0.0017017 2869000 420.723 458.37 378.42 392.17 305.29 405.71 423.94 272.25 367.46 294.63 FALSE TRUE 384.9382995 428.5300297 352.7339047 422.3750014 293.1296528 428.6809496 395.6597361 269.869747 405.658782 331.1309887 1.162495546 1.294140519 1.065239789 1.275552623 0.885237754 1.29459629 1.19487378 0.814993933 1.225070428 1 8.371258221 -2.808841925 0.137947392 0.963480944 1.653444661 0.112119207 0.154539576 112.9448293 1.458574073 0.751199193 14.53100257 0.001552952 2.808841925 0.689963717 NLEELEEKST(ph)TPPPAEPVSLPQEPPKPR ddPTM_A459_MK2206_30min_R1 1 NLEELEEKSTTPPPAEPVSLPQEPPKPR 28 2 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 NLEELEEKS(0.044)T(0.564)T(0.392)PPPAEPVSLPQEPPKPR 88.278 2.94E-05 18025000 2203.1 1960.8 2759.7 3881.8 2989.9 2112.1 1385.4 3653.4 563.04 112.73 TRUE FALSE 2015.714776 1833.151564 2572.379253 4180.776909 2870.805952 2231.685277 1292.982494 3621.458709 621.5700229 126.6958435 15.90987298 14.46891637 20.30358047 32.9985325 22.65903816 17.61451059 10.20540578 28.58387939 4.906001695 1 6.985225384 -8.403564323 5.563983224 1.202372204 20.17886394 0.550227143 6.32441749 0.170996162 6.583622793 6.399265465 1.662422778 3.95E-09 8.403564323 18.97649173 NLEELEEKSTT(ph)PPPAEPVSLPQEPPKPR ddPTM_A459_MK2206_30min_R1 3 NLEELEEKSTTPPPAEPVSLPQEPPKPR 28 2 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 NLEELEEKS(0.064)T(0.248)T(0.688)PPPAEPVSLPQEPPKPR;NLEELEEKS(0.011)T(0.094)T(0.895)PPPAEPVSLPQEPPKPR;NLEELEEKS(0.021)T(0.251)T(0.728)PPPAEPVSLPQEPPKPR 96.133 1.65E-06 65672000 17607.4 16906.6 20477.9 32268.3 23720.3 13752.4 9617.9 25638.4 3029.71 1336.3 TRUE FALSE 16109.79817 15805.97727 19087.9172 34753.61006 22775.47022 14531.049 8976.30744 25414.24617 3344.659196 1501.850933 10.72662927 10.52433163 12.70959507 23.14051901 15.16493397 9.67542696 5.976829821 16.92194986 2.227024749 1 10.55252591 -8.373626604 0.774493312 0.615297012 13.90615209 0.436649219 4.78606577 0.66312579 0.895104722 4.862841473 1.874370022 4.23E-09 8.373626604 13.29085508 NLEQILNGGES(ph)PK ddPTM_A459_MK2206_30min_R1 2 NLEQILNGGESPK 13 0 Q13033-2;Q13033;G3V340;G3V3G7 Q13033-2 STRN3 Striatin-3 1 NLEQILNGGES(1)PK;NLEQILNGGES(1)PK 252.1 4.67E-23 93487000 10320.4 13918.2 13022 10228.6 5050.7 4869 8059.1 7520.8 12612.2 12601.7 TRUE FALSE 9442.595785 13012.12265 12138.10292 11016.40854 4849.519924 5144.678572 7521.492144 7455.046439 13923.28332 14162.89373 0.666713735 0.91874746 0.857035515 0.777835995 0.342410246 0.363250524 0.531070294 0.52637876 0.983081818 1 13.78982844 -6.026262197 24.19751115 0.580887271 0.823425808 0.123299916 0.219517742 775.0297095 714097.7732 0.064852953 0.084054964 9.41E-07 6.026262197 0.242538538 NLEQILNGGES(ph)PK ddPTM_A459_MK2206_30min_R2 6 NLEQILNGGESPK 13 0 Q13033-2;Q13033;G3V340;G3V3G7 Q13033-2 STRN3 Striatin-3 1 NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK 191.15 0.00016923 31617500 263867 217444 257240 188858 183314 127028.8 241795 179601 143405 245855 TRUE FALSE 284068.8604 206646.0472 265816.2532 173427.6973 176116.1713 131862.97 210047.0261 203075.4674 155878.1077 237832.7715 1.194405879 0.868871207 1.117660327 0.729200169 0.740504221 0.554435662 0.883171082 0.853858222 0.65541055 1 17.859588 -5.766950438 24.99930969 0.761737844 1.041168361 0.466396985 0.13957415 113.9158324 516748.6346 0.037848857 0.057971522 1.71E-06 5.766950438 0.279430517 NLEQILNGGES(ph)PKQK ddPTM_A459_MK2206_30min_R1 3 NLEQILNGGESPKQK 15 1 Q13033-2;Q13033;G3V340 Q13033-2 STRN3 Striatin-3 1 NLEQILNGGES(1)PKQK;NLEQILNGGES(1)PKQK;NLEQILNGGES(1)PKQK 121.26 0.00093229 56781000 7902.7 9548.4 9777.4 11079.4 7080.5 5000.12 6530.2 8269.3 5477.3 3250.6 TRUE FALSE 7230.533866 8926.797425 9113.737329 11932.73731 6798.468692 5283.222473 6094.582273 8197.002382 6046.684936 3653.308869 1.979173983 2.443482811 2.494652836 3.266282085 1.860907176 1.446147222 1.668236246 2.243720057 1.655125573 1 11.83498802 -6.498439601 23.56863649 1.6810387 2.538506511 0.5382083 0.411083474 311.3034584 300215.1433 0.128959986 0.145357803 3.17E-07 6.498439601 0.857467811 NLESHLMS(ph)PAEIPGQPVPK ddPTM_A459_MK2206_30min_R2 1 NLESHLMSPAEIPGQPVPK 19 0 Q9NRA8;Q9NRA8-3;Q9NRA8-2;B0QYZ7 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 NLES(0.004)HLMS(0.996)PAEIPGQPVPK 78.225 0.0050506 4444400 39172 39200 36436 36828 37359 30592 40879 26513 28304 32552 TRUE FALSE 42171.03844 37253.385 37650.75805 33819.03459 35892.09795 31756.2 35511.5382 29978.34013 30765.83076 31489.83091 1.339195455 1.183029058 1.19564815 1.073966853 1.139799641 1.008458892 1.127714477 0.95200067 0.977008446 1 14.94259839 -1.522878745 0.269597701 0.973075577 3.468481721 0.798778216 0.051478286 21.26922425 0.296894685 0.057819537 24.68267873 0.03 1.522878745 2.495406145 NLFASFPTEESSINYTFKT(ph)PEK ddPTM_A459_MK2206_30min_R1 2 NLFASFPTEESSINYTFKTPEK 22 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NLFASFPTEESSINYT(0.003)FKT(0.997)PEK;NLFAS(0.001)FPT(0.208)EES(0.241)S(0.014)INY(0.123)T(0.039)FKT(0.374)PEK 130.48 3.36E-05 173688000 9274.2 10040.8 10168.8 8351 6018.9 5813.1 7502.5 7401.9 9315.6 8175.2 TRUE FALSE 8485.380589 9387.142095 9478.570188 8994.195467 5779.154468 6142.232698 7002.021914 7337.185969 10283.98996 9188.005496 0.923528027 1.021673539 1.031624349 0.978906191 0.628989009 0.668505553 0.762082904 0.798561339 1.119284263 1 13.165536 -6.041636815 23.50315493 0.807695988 0.9968902 0.229939149 0.139551039 321.8328889 181667.6231 0.042569342 0.054965668 9.09E-07 6.041636815 0.189194212 NLFASFPTEESSINYTFKT(ph)PEK ddPTM_A459_MK2206_30min_R2 1 NLFASFPTEESSINYTFKTPEK 22 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NLFASFPT(0.004)EES(0.013)S(0.004)INY(0.013)T(0.079)FKT(0.887)PEK 53.957 0.039449 8407600 47536 47488 42505 38616 38331 25510 52245 36673 29777 48781 TRUE FALSE 51175.39271 45129.81497 43922.09549 35460.94927 36825.93234 26480.80093 45385.16874 41466.28702 32366.94964 47189.27996 1.084470726 0.956357355 0.930764265 0.75146197 0.780387672 0.561161369 0.961768622 0.878722605 0.685896239 1 15.52617154 -5.302999545 1.656247372 0.794373477 1.064450677 0.339587952 0.123970606 0.518081983 2.45023487 0.036495932 0.160009702 4.98E-06 5.302999545 0.270077201 NLFNQELLS(ph)PSKR ddPTM_A459_MK2206_30min_R1 1 NLFNQELLSPSKR 13 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 NLFNQELLS(0.947)PS(0.053)KR 90.706 0.010661 13322000 4328.1 5040.1 5266.3 4769.2 3973.7 3802.7 4155.7 3993.5 4952.5 4236.7 TRUE FALSE 3959.972367 4711.988574 4908.838229 5136.52461 3815.419115 4018.005588 3878.480836 3958.585251 5467.330098 4761.574381 0.831651897 0.989586258 1.030927554 1.078745011 0.801293608 0.843839719 0.814537488 0.831360582 1.148218984 1 12.21722295 -4.742420923 24.18111801 0.938007231 0.831651364 0.078151464 0.115460043 2764.193993 3514267.764 0.030337086 1.015183891 1.81E-05 4.742420923 -0.106355867 NLFNQELLSPS(ph)KR ddPTM_A459_MK2206_30min_R2 1 NLFNQELLSPSKR 13 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 NLFNQELLS(0.164)PS(0.836)KR 78.228 0.021316 9924500 24205 21070 24667 24725 27436 19719 29815 18247 20387 26922 TRUE FALSE 26058.15341 20023.69444 25489.38547 22704.88841 26358.72479 20469.42036 25900.25469 20631.94555 22160.22441 26043.53734 1.000561217 0.768854637 0.978722096 0.87180509 1.012102328 0.785969283 0.994498341 0.792209802 0.850891494 1 14.66863779 -6.763184475 24.99992783 0.878588455 0.917528759 0.040684567 0.094212742 185.2966838 2654498.1 0.030479082 0.028310773 1.73E-07 6.763184475 0.038940304 NLGS(ph)INTELQDVQR ddPTM_A459_MK2206_30min_R2 1 NLGSINTELQDVQR 14 0 A0A087X1A9;O75396 A0A087X1A9 SEC22B Vesicle-trafficking protein SEC22b 1 NLGS(0.861)INT(0.139)ELQDVQR 94.454 0.021373 0 6391 6431.7 6585.1 3999.6 5478.4 6220.6 5437.6 3869 5331 6466.6 TRUE FALSE 6880.299874 6112.311131 6804.643947 3672.819886 5263.290489 6457.329292 4723.636588 4374.691584 5794.680744 6255.595372 1.099863317 0.977095027 1.087769196 0.587125552 0.841373231 1.032248556 0.755105838 0.699324577 0.926319623 1 12.61093148 -5.709057076 24.99976325 0.827187836 1.04712837 0.37313749 0.130558312 107.2124622 51166.77033 0.035367103 0.061257546 1.95E-06 5.709057076 0.219940534 NLGSGS(ph)PKPR ddPTM_A459_MK2206_30min_R1 1 NLGSGSPKPR 10 1 A0A1C7CYX9 A0A1C7CYX9 1 NLGS(0.005)GS(0.995)PKPR 112.02 0.040309 180010000 6324.3 7443.9 6668.2 5968.1 4595.2 4142.3 4791.2 5141.2 3197.3 5566.7 TRUE FALSE 5786.385075 6959.300757 6215.581163 6427.764096 4412.163454 4376.833446 4471.58779 5096.25103 3529.670777 6256.344822 0.924882697 1.112358886 0.993484429 1.027399269 0.705230223 0.699583154 0.714728474 0.814573233 0.56417459 1 12.61110431 -6.258504203 24.63260105 0.736187689 1.020015671 0.569270921 0.112438638 137.4831091 1153784.359 0.03136784 0.038721474 5.51E-07 6.258504203 0.283827982 NLHYFNSDSFASHPNY(ph)PYSDEY ddPTM_A459_MK2206_30min_R1 1 NLHYFNSDSFASHPNYPYSDEY 22 0 A0A0A0MSS8;P42330;S4R3Z2;P42330-2 A0A0A0MSS8;P42330-2 AKR1C3 Aldo-keto reductase family 1 member C3 1 NLHYFNSDSFAS(0.01)HPNY(0.451)PY(0.166)S(0.207)DEY(0.166) 111.09 0.00029963 9202100 1760.2 1214.4 1914 1081.8 1848 1830.9 2026.1 1468 1122.4 1138.1 TRUE FALSE 1610.485747 1135.342339 1784.083013 1165.120423 1774.390247 1934.563976 1890.942566 1455.165431 1239.077497 1279.09642 1.259080802 0.887612788 1.394799473 0.91089335 1.38722165 1.512445774 1.478342474 1.137651085 0.96871313 1 10.32090931 -8.001516287 24.89752871 1.007298345 1.257148413 0.229869981 0.201981529 85.071325 1396858.834 0.119484845 0.056110505 9.97E-09 8.001516287 0.249850068 NLHYFNSDSFASHPNYPYS(ph)DEY ddPTM_A459_MK2206_30min_R1 1 NLHYFNSDSFASHPNYPYSDEY 22 0 A0A0A0MSS8;P42330;S4R3Z2;P42330-2 A0A0A0MSS8;P42330-2 AKR1C3 Aldo-keto reductase family 1 member C3 1 NLHYFNSDS(0.002)FAS(0.026)HPNY(0.087)PY(0.376)S(0.478)DEY(0.031) 78.401 0.00095292 8534800 1283.9 901.44 1089.6 848.59 1378.2 1172.1 1059.1 1232.8 780.52 791.31 TRUE FALSE 1174.697563 842.7560922 1015.640988 913.9485488 1323.303376 1238.463289 988.4493714 1222.02176 861.6578471 889.3434569 1.320859285 0.947616003 1.142012099 1.02766658 1.487955374 1.392559061 1.111437166 1.374071794 0.968869609 1 9.796596873 -3.640045448 11.78797627 1.188957194 45.17356283 0 0.18950884 0 0 0.04313207 0 0.000229063 3.640045448 43.98460564 NLHYFNSDSFASHPNYPYSDEY ddPTM_A459_MK2206_30min_R1 2 NLHYFNSDSFASHPNYPYSDEY 22 0 A0A0A0MSS8;P42330;S4R3Z2;P42330-2 A0A0A0MSS8;P42330-2 AKR1C3 Aldo-keto reductase family 1 member C3 0 ; 186.45 1.97E-21 142898000 6453.7 3203.9 4063.4 3134.7 7715.6 7337.7 6472 5107.9 3104.7 3294.1 FALSE TRUE 5904.778925 2995.325528 3787.587729 3376.135137 7408.271314 7753.154233 6040.264689 5063.242169 3427.444675 3702.197977 1.594938726 0.809066815 1.02306461 0.911927228 2.001046773 2.094203033 1.63153476 1.367631391 0.925786437 1 11.85416633 -6.237650483 24.8969426 1.557698874 1.060651657 0.199359981 0.401073856 1115.95558 1167934.797 0.124346122 0.16044013 5.79E-07 6.237650483 -0.497047217 NLHYFNSDSFASHPNYPYSDEY ddPTM_A459_MK2206_30min_R2 2 NLHYFNSDSFASHPNYPYSDEY 22 0 A0A0A0MSS8;P42330;S4R3Z2;P42330-2 A0A0A0MSS8;P42330-2 AKR1C3 Aldo-keto reductase family 1 member C3 0 ; 126.4 4.20E-05 16409800 22902.4 56868 35310.9 57167 61670 73434 64207 46897 55760 40766 FALSE TRUE 24655.82535 54044.01781 36488.14778 52496.27323 59248.52593 76228.58233 55776.54377 53026.59892 60609.90401 39435.80876 0.625214142 1.370430061 0.925254202 1.331182874 1.502404231 1.932978801 1.414362873 1.344630695 1.536925599 1 15.26721861 -5.926566476 3.604272929 1.490928958 1.013251745 0.373188201 0.274772791 0.244397155 6.351790364 0.078592898 0.120297897 1.18E-06 5.926566476 -0.477677213 NLLEDDS(ph)DEEEDFFLR ddPTM_A459_MK2206_30min_R1 3 NLLEDDSDEEEDFFLR 16 0 O75379 O75379 VAMP4 Vesicle-associated membrane protein 4 1 NLLEDDS(1)DEEEDFFLR;NLLEDDS(1)DEEEDFFLR;NLLEDDS(1)DEEEDFFLR 166.52 1.63E-05 7128600 775.42 1166.16 1189.42 911.93 1200.05 1212.66 1198.38 1124.78 1280.1 1182.41 TRUE FALSE 709.4664571 1090.242772 1108.685484 982.1670066 1152.249467 1281.319761 1118.438257 1114.946167 1413.170976 1328.895878 0.533876633 0.820412487 0.834290709 0.739084998 0.867072798 0.964198763 0.841629714 0.839001901 1.063417383 1 10.37601235 -3.521992123 0.296869181 0.975334143 1.75E-23 0.646639191 0.082993982 12.05753462 0.481801075 0.091774199 4.894579685 0.000300613 3.521992123 -0.975334143 NLLEENFEEHS(ph)MSPER ddPTM_A459_MK2206_30min_R1 2 NLLEENFEEHSMSPER 16 0 P38398-8;P38398-4;P38398;P38398-7;Q5YLB2 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 NLLEENFEEHS(0.621)MS(0.379)PER;NLLEENFEEHS(0.516)MS(0.484)PER 119.62 0.00097174 0 1441.73 1239.01 1107.87 1402.33 1095.85 977.2 1365.8 1036.75 1131.54 1156.81 TRUE FALSE 1319.103293 1158.350224 1032.670871 1510.3377 1052.199974 1032.52822 1274.689974 1027.685804 1249.167632 1300.124356 1.014597785 0.890953406 0.794286228 1.161687105 0.809307178 0.794176507 0.980436962 0.790451928 0.960806269 1 10.34443391 -4.757821029 24.55352356 0.902395704 1.01459798 0.068319059 0.11444987 232.6053002 1578118.981 0.027476691 0.196617119 1.75E-05 4.757821029 0.112202276 NLLEENFEEHS(ph)MSPER ddPTM_A459_MK2206_30min_R2 2 NLLEENFEEHSMSPER 16 0 P38398-8;P38398-4;P38398;P38398-7;Q5YLB2 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 NLLEENFEEHS(0.989)MS(0.011)PER;NLLEENFEEHS(0.654)MS(0.346)PER 131.48 0.00055815 2297800 16381.4 18084 18398.6 18305.7 20566.8 16140.9 18183.6 17199.6 13536.1 17789.6 TRUE FALSE 17635.57258 17185.97486 19012.00014 16810.06575 19759.24409 16755.15326 15796.07148 19447.64678 14713.44551 17209.12681 1.02478021 0.99865467 1.104762627 0.976811081 1.148184002 0.973620187 0.917889191 1.130077487 0.854979202 1 14.07088628 NLLEENFEEHSMS(ph)PER ddPTM_A459_MK2206_30min_R2 2 NLLEENFEEHSMSPER 16 0 P38398-8;P38398-4;P38398;P38398-7;Q5YLB2 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 NLLEENFEEHS(0.312)MS(0.688)PER;NLLEENFEEHS(0.005)MS(0.995)PER 110.64 0.005164 3011900 19051.6 21481 21415 21162.3 20338.3 17036.9 21240.1 17487.3 18007.6 24005 TRUE FALSE 20510.20514 20414.28478 22128.96541 19433.2724 19539.71615 17685.25117 18451.24936 19772.95015 19573.8685 23221.71882 0.883233722 0.87910309 0.952942613 0.836857622 0.841441424 0.761582349 0.794568632 0.851485211 0.842912131 1 14.50318714 -5.846513876 10.85844834 0.83469534 0.902440116 0.136260389 0.061759902 0.640817826 77.29214229 0.016791902 0.024928867 1.42E-06 5.846513876 0.067744776 NLLHADSNGYTNLPDVVQPS(ph)HSPTENSK ddPTM_A459_MK2206_30min_R1 1 NLLHADSNGYTNLPDVVQPSHSPTENSK 28 0 Q8N4C8;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8-5 Q8N4C8;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 NLLHADSNGYTNLPDVVQPS(0.482)HS(0.482)PT(0.027)ENS(0.008)K 77.322 0.0016514 0 698.83 658.64 622.54 653.79 551.83 439.61 693.97 597.16 394.8 557.4 TRUE FALSE 639.3908388 615.7624163 580.2837193 704.1450191 529.8494426 464.5003383 647.6765275 591.9390931 435.8408728 626.4549202 1.020649401 0.982931727 0.926297648 1.124015466 0.845790217 0.741474483 1.033875713 0.944902936 0.695725836 1 9.291066886 -6.291193805 24.71414314 0.875278022 1.005065187 0.274095764 0.108468706 873.8084319 725786.286 0.033742888 0.038266156 5.11E-07 6.291193805 0.129787165 NLLLST(ph)SEEQIEK ddPTM_A459_MK2206_30min_R1 1 NLLLSTSEEQIEK 13 0 P17181-3;P17181;P17181-4 P17181-3 IFNAR1 Interferon alpha/beta receptor 1 1 NLLLS(0.014)T(0.94)S(0.046)EEQIEK 104.9 0.017499 3674900 1653.4 1513.9 1575.2 1368.2 1862.6 1348.3 1670.2 1593.2 1607.1 1695.5 TRUE FALSE 1512.769648 1415.344835 1468.279813 1473.579001 1788.408698 1424.639581 1558.784005 1579.27082 1774.163796 1905.55134 0.793875041 0.742748204 0.770527554 0.773308475 0.938525591 0.747625924 0.81802257 0.828773692 0.931050116 1 10.89599276 -9.017127631 0.265854716 1.057051499 0.751305236 0.606345448 0.053713266 2.857331923 0.45179974 0.269748874 0.10023074 9.61E-10 9.017127631 -0.305746264 NLLPAYRPNLS(ph)PPAEAGLALPPTGYR ddPTM_A459_MK2206_30min_R1 1 NLLPAYRPNLSPPAEAGLALPPTGYR 26 1 Q8N1G0;Q8N1G0-2;F8WCX2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 NLLPAY(0.071)RPNLS(0.926)PPAEAGLALPPT(0.001)GY(0.001)R 45.327 0.033557 26346000 2091.5 2328.1 1845.4 1857.6 2264.5 1950.7 2260.9 2105.8 2107.7 1797.3 TRUE FALSE 1913.606942 2176.540267 1720.13939 2000.672674 2174.30017 2061.146948 2110.079486 2087.389213 2326.802957 2019.963093 0.947347478 1.077514869 0.851569712 0.990450113 1.07640589 1.02038842 1.044612891 1.033379877 1.151903698 1 10.98011322 -6.109827557 5.388449252 1.053381718 0.963313671 0.319492915 0.063679649 0.283937503 11.72870117 0.018521499 0.024250802 7.77E-07 6.109827557 -0.090068047 NLLQQS(ph)WEDMKR ddPTM_A459_MK2206_30min_R1 2 NLLQQSWEDMKR 12 1 Q8TDM6-4;Q8TDM6;Q8TDM6-2;R4GMQ2 Q8TDM6-4 DLG5 Disks large homolog 5 1 NLLQQS(1)WEDMKR;NLLQQS(1)WEDMKR 81.992 0.01909 25296000 5697.4 5964.6 5002.8 5655 5182 4681 5561 5275.3 6150.3 5518.6 TRUE FALSE 5212.806212 5576.303456 4663.223875 6090.54908 4975.589967 4946.034175 5190.035837 5229.178608 6789.645694 6202.285831 0.840465331 0.899072311 0.751855687 0.981984585 0.802218747 0.79745344 0.836794043 0.843105067 1.094700547 1 12.5985843 -8.253237606 24.51124028 1.047350277 0.844274206 0.628721773 0.062469943 250.8297414 749619.0602 0.041881791 0.015206514 5.58E-09 8.253237606 -0.203076071 NLLQQS(ph)WEDMKR ddPTM_A459_MK2206_30min_R2 1 NLLQQSWEDMKR 12 1 Q8TDM6-4;Q8TDM6;Q8TDM6-2;R4GMQ2 Q8TDM6-4 DLG5 Disks large homolog 5 1 NLLQQS(1)WEDMKR 65.652 0.039873 9303500 21029 26701 30690 33633 37914 23275 34749 24699 24435 30710 TRUE FALSE 22638.99641 25375.06717 31713.18928 30885.07631 36425.30586 24160.74643 30186.41456 27927.2441 26560.31213 29707.93522 0.762052167 0.854151155 1.067498938 1.039623794 1.226113683 0.813275856 1.016106112 0.940060085 0.894047733 1 14.85856072 -5.061327855 4.130328751 1.000400169 0.776747971 0.366024247 0.103847596 0.222299016 7.451264217 0.027480131 0.091392749 8.68E-06 5.061327855 -0.223652198 NLLS(ph)VAYK ddPTM_A459_MK2206_30min_R1 1 NLLSVAYK 8 0 P31947;P31947-2;A2IDB2;E7EX29;P63104;E7ESK7;E5RGE1;E5RIR4;E9PD24;E7EVZ2;P27348;E9PG15;P31946-2;P31946;Q4VY20;A0A0J9YWZ2;Q4VY19;A0A0J9YWE8;P61981;P62258;P62258-2;B4DJF2;I3L3T1;K7EIT4;Q04917 P31947;E7EX29;P27348;P31946-2;P61981;P62258;Q04917 SFN;YWHAH;YWHAZ;YWHAQ;YWHAB;YWHAG;YWHAE "14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon;14-3-3 protein eta" 1 NLLS(0.999)VAY(0.001)K 94.363 0.022767 44075000 5198.9 5552.7 5231.2 5819.3 4833.9 4264.4 5040.9 4919.3 4957.4 4472.9 TRUE FALSE 4756.706254 5191.218221 4876.120719 6267.503494 4641.355527 4505.846643 4704.630759 4876.291079 5472.73947 5027.036621 0.946224707 1.032659718 0.969979152 1.246759068 0.923278639 0.896322622 0.935865623 0.970013041 1.08866115 1 12.29549248 NLLS(ph)VAYK ddPTM_A459_MK2206_30min_R2 2 NLLSVAYK 8 0 P31947;P31947-2;A2IDB2;E7EX29;P63104;E7ESK7;E5RGE1;E5RIR4;E9PD24;E7EVZ2;P27348;E9PG15;P31946-2;P31946;Q4VY20;A0A0J9YWZ2;Q4VY19;A0A0J9YWE8;P61981;P62258;P62258-2;B4DJF2;I3L3T1;K7EIT4;Q04917 P31947;E7EX29;P27348;P31946-2;P61981;P62258;Q04917 SFN;YWHAH;YWHAZ;YWHAQ;YWHAB;YWHAG;YWHAE "14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon;14-3-3 protein eta" 1 NLLS(1)VAYK;NLLS(1)VAYK 92.866 0.024864 61471000 453480 502200 436660 520080 422030 378410 541760 390120 362100 434590 TRUE FALSE 488198.7775 477261.4783 451218.0265 477587.8003 405458.9817 392810.6577 470626.2612 441110.0235 393594.8035 420409.3639 1.161246203 1.135230371 1.073282532 1.136006572 0.964438513 0.93435278 1.119447619 1.049239292 0.936217975 1 18.68143528 -6.252801996 24.90239899 1.005706411 1.123272145 0.551559668 0.055438181 534.6218048 1541365.078 0.017449622 0.022167923 5.59E-07 6.252801996 0.117565734 NLNIINTHAYNQPEDLVYS(ph)QPEMR ddPTM_A459_MK2206_30min_R1 2 NLNIINTHAYNQPEDLVYSQPEMR 24 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 NLNIINTHAYNQPEDLVY(0.122)S(0.878)QPEMR;NLNIINTHAYNQPEDLVY(0.116)S(0.883)QPEMR 94.384 2.37E-05 19602800 2892.9 3551 3314.1 3474.1 3442.8 3229.8 3521.1 3252.26 3260.5 2451.89 TRUE FALSE 2646.843664 3319.829255 3089.148126 3741.675784 3305.665986 3412.668485 3286.213844 3223.825834 3599.440643 2755.648644 0.960515656 1.204736047 1.121023949 1.357820342 1.199596325 1.238426565 1.192537318 1.169897273 1.306204494 1 11.42817624 -4.228251163 1.703606649 1.2119228 0.1559209 0.358748226 0.093395186 5.683707928 4.308320445 0.023659527 15.72770262 5.91E-05 4.228251163 -1.0560019 NLNIINTHAYNQPEDLVYS(ph)QPEMR ddPTM_A459_MK2206_30min_R2 5 NLNIINTHAYNQPEDLVYSQPEMR 24 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 NLNIINTHAYNQPEDLVY(0.135)S(0.865)QPEMR;NLNIINTHAYNQPEDLVYS(1)QPEMR;NLNIINTHAYNQPEDLVYS(1)QPEMR;NLNIINTHAYNQPEDLVYS(1)QPEMR;NLNIINTHAYNQPEDLVYS(1)QPEMR 155.5 1.13E-12 24997000 76725.2 104045.1 94101.6 100072.8 110674.1 102706.8 111673.5 81187.2 92650.7 100037.1 TRUE FALSE 82599.3403 98878.37163 97238.90038 91896.53212 106328.4787 106615.3792 97010.63531 91798.6458 100709.2904 96772.89762 0.853537946 1.021756856 1.004815426 0.949610215 1.098742327 1.101707005 1.002456656 0.94859871 1.040676604 1 16.56231544 -4.760880007 24.97451145 1.01909444 0.853537756 0.502732612 0.049279317 12.14474149 541749.6078 0.013141106 0.075710948 1.73E-05 4.760880007 -0.165556684 NLNNS(ph)NLFSPVNR ddPTM_A459_MK2206_30min_R2 1 NLNNSNLFSPVNR 13 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 NLNNS(0.509)NLFS(0.491)PVNR 77.894 0.042194 15734000 26133 26452 21764 21681 21520 19176 24715 15811 15762 17419 TRUE FALSE 28133.76257 25138.43214 22489.6009 19909.59295 20675.01667 19905.75612 21469.89081 17877.55199 17132.95027 16850.61946 1.66959812 1.491840238 1.33464535 1.18153478 1.22695885 1.181307083 1.274130655 1.06094331 1.016754922 1 14.04051401 -1.522878745 0.310542678 1.045462108 6.811365909 0.897611737 0.064354608 17.79560493 0.254085326 0.068611466 57.67779272 0.03 1.522878745 5.765903801 NLNNSNLFS(ph)PVNR ddPTM_A459_MK2206_30min_R1 4 NLNNSNLFSPVNR 13 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 NLNNS(0.003)NLFS(0.997)PVNR;NLNNSNLFS(1)PVNR;NLNNSNLFS(1)PVNR;NLNNSNLFS(1)PVNR 238.65 1.07E-17 244641000 9018.5 9211.7 8922.8 7279 8587.8 7159.2 8052.8 6938.1 6945.7 6415.1 TRUE FALSE 8251.429217 8612.016656 8317.145196 7839.629841 8245.729741 7564.547717 7515.612405 6877.440923 7667.73037 7209.85102 1.144465981 1.194479141 1.153580729 1.087349769 1.143675468 1.04919612 1.042408835 0.953895012 1.063507464 1 12.81575373 -6.729814306 0.872761411 1.001266989 1.165815914 0.751107087 0.035841986 0.276326556 0.459115464 0.02177134 0.021028437 1.86E-07 6.729814306 0.164548924 NLNNSNLFS(ph)PVNR ddPTM_A459_MK2206_30min_R2 5 NLNNSNLFSPVNR 13 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 NLNNSNLFS(1)PVNR;NLNNSNLFS(1)PVNR;NLNNSNLFS(1)PVNR;NLNNSNLFS(1)PVNR;NLNNSNLFS(1)PVNR 191.63 0.00010981 251357900 186277 207743 180903 196066 185866 163679 186630 130863 125353 154022 TRUE FALSE 200538.5103 197426.7847 186934.2157 180046.7806 178567.9669 169907.919 162125.2568 147967.2434 136255.9774 148996.2748 1.345929693 1.325045106 1.25462342 1.208397867 1.198472695 1.140350115 1.088116177 0.993093577 0.91449251 1 17.18491673 -6.840743063 0.57883361 0.942014435 1.34027125 0.93598255 0.035072007 0.208531074 0.150877426 0.031689095 0.034300664 1.44E-07 6.840743063 0.398256815 NLPIMSTASVEIDDALYS(ph)R ddPTM_A459_MK2206_30min_R1 1 NLPIMSTASVEIDDALYSR 19 0 A0AVT1-4;A0AVT1-3;A0AVT1 A0AVT1-4 UBA6 Ubiquitin-like modifier-activating enzyme 6 1 NLPIMS(0.236)T(0.157)AS(0.111)VEIDDALYS(0.496)R 78.917 0.0295 0 165.4 153.41 0 0 0 0 80.891 157.62 134.31 70.147 TRUE FALSE 151.3318615 143.4229811 0 0 0 0 75.49490898 156.241945 148.2720051 78.83733994 1.919545504 1.819226539 0 0 0 0 0.957603453 1.981826696 1.880733232 1 6.300807194 -7.593754232 5.174802447 1.684326977 0.583390518 0.27092783 0.726467152 0.281442655 13.9978144 0.393967021 0.223102192 2.55E-08 7.593754232 -1.100936458 NLPTPT(ph)SAPTPGLAQGVHAPSTCSYMEATASSR ddPTM_A459_MK2206_30min_R2 3 NLPTPTSAPTPGLAQGVHAPSTCSYMEATASSR 33 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 NLPT(0.202)PT(0.673)S(0.063)APT(0.063)PGLAQGVHAPSTCSYMEATASSR;NLPT(0.049)PT(0.406)S(0.138)APT(0.406)PGLAQGVHAPSTCSYMEATASSR;NLPT(0.121)PT(0.602)S(0.199)APT(0.069)PGLAQGVHAPS(0.001)T(0.001)CS(0.003)Y(0.003)MEAT(0.001)ASSR 74.429 1.79E-05 26819700 24016.4 34618 37060 44929 53910 41086 41834 27566.6 32945.5 35340.4 TRUE FALSE 25855.11405 32898.92046 38295.5619 41258.15698 51793.22252 42649.55652 36341.14555 31169.64927 35811.04004 34187.24564 0.75627953 0.962315619 1.120171022 1.206828927 1.514986702 1.247528302 1.063003025 0.91173327 1.047497082 1 15.06117057 -3.632590968 12.06589429 1.097711036 1.063751225 0 0.197925242 0 0 0.050206227 0 0.000233028 3.632590968 -0.033959812 NLPTPTSAPT(ph)PGLAQGVHAPSTCSYMEATASSR ddPTM_A459_MK2206_30min_R2 1 NLPTPTSAPTPGLAQGVHAPSTCSYMEATASSR 33 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 NLPT(0.037)PT(0.139)S(0.048)APT(0.776)PGLAQGVHAPSTCSYMEATASSR 74.529 1.77E-05 8745200 6737.2 11366 8939.5 19082 19695 16881 15093 8346.8 13330 10456 TRUE FALSE 7253.005212 10801.58097 9237.538468 17522.93956 18921.67534 17523.41828 13111.27097 9437.755419 14489.4193 10114.82158 0.717067044 1.067896343 0.913267565 1.73240224 1.870688 1.732449569 1.296243426 0.933061977 1.432493811 1 13.30418325 -5.741145671 24.70250704 1.451019139 0.916258485 0.394807544 0.29886091 236.5907088 287987.2102 0.089158926 0.154176543 1.81E-06 5.741145671 -0.534760653 NLQDGQISDTGDLGEDIAS(ph)N ddPTM_A459_MK2206_30min_R1 1 NLQDGQISDTGDLGEDIASN 20 0 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;Q7Z4S6-3;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 NLQDGQISDTGDLGEDIAS(1)N 139.2 7.84E-05 2371700 1201.1 1479.1 1291 1056.3 1369.3 985.88 1551.9 1263.3 1244.7 1104.8 TRUE FALSE 1098.940138 1382.810321 1203.370517 1137.656409 1314.757881 1041.699674 1448.375583 1252.255101 1374.091019 1241.670965 0.885049396 1.113668887 0.969154108 0.916230178 1.058861743 0.838949853 1.166472941 1.008524107 1.106646655 1 10.2780672 -7.275865893 24.99817874 1.071121254 0.972893511 0.262460426 0.086845323 1200.862389 2080838.48 0.034316759 0.023256194 5.30E-08 7.275865893 -0.098227743 NLQEAEEWYK ddPTM_A459_MK2206_30min_R1 3 NLQEAEEWYK 10 0 P08670;B0YJC4;H7C5W5;P41219-2;P41219;F8W835;B0YJC5 P08670;B0YJC5 VIM;PRPH Vimentin;Peripherin 0 ;; 180.07 0.0016303 38808000 7831.7 8267.4 9223.6 8381.6 8583.8 6997 7429.1 7573.1 6071.75 6067.1 FALSE TRUE 7165.572789 7729.190757 8597.52773 9027.152284 8241.88907 7393.164093 6933.518294 7506.889185 6702.93014 6818.738152 1.05086493 1.133522154 1.260867852 1.323874313 1.208711771 1.084242264 1.016833047 1.100920583 0.983016211 1 12.73528907 -6.878416597 3.712564351 1.035250235 1.202977896 0.541586844 0.074030299 0.205015664 5.376189018 0.030022026 0.026356189 1.32E-07 6.878416597 0.167727661 NLQEAEEWYK ddPTM_A459_MK2206_30min_R2 3 NLQEAEEWYK 10 0 P08670;B0YJC4;H7C5W5;P41219-2;P41219;F8W835;B0YJC5 P08670;B0YJC5 VIM;PRPH Vimentin;Peripherin 0 ;; 164.43 0.0052033 54917700 155306 179024 175971 181215 172231 139215 186009 144816 151864 165944 FALSE TRUE 167196.3468 170133.9285 181837.7853 166409.1548 165468.3455 144512.9244 161585.7949 163743.9484 165072.8562 160529.2609 1.041531904 1.059831258 1.132739192 1.036628176 1.030767504 0.900227931 1.006581566 1.020025555 1.028303845 1 17.29247677 -6.233661459 2.789997458 0.992436668 1.07557708 0.43033134 0.041220269 0.265099495 4.119017616 0.013793044 0.017668512 5.84E-07 6.233661459 0.083140413 NLQEEIDALESR ddPTM_A459_MK2206_30min_R2 2 NLQEEIDALESR 12 0 Q9NQP4;E9PQY2 Q9NQP4 PFDN4 Prefoldin subunit 4 0 ; 182.71 0.0014437 2145630 10729.7 12917 9017.8 12106.4 14257.8 12738.5 14540.6 11582.2 11614.3 11769 FALSE TRUE 11551.17408 12275.56056 9318.448951 11117.26839 13697.96713 13223.27254 12631.40175 13096.03331 12624.49082 11384.97849 1.014597796 1.078224308 0.818486302 0.976485674 1.203161441 1.161466625 1.109479632 1.150290562 1.10887261 1 13.47484395 -6.237488979 19.55905914 1.131052348 0.968577461 0.466610491 0.078330773 43.5652901 35576.27543 0.02324489 0.029957072 5.79E-07 6.237488979 -0.162474887 NLQYYDIS(ph)AK ddPTM_A459_MK2206_30min_R2 1 NLQYYDISAK 10 0 F5H018;B5MDF5;J3KQE5;P62826;B4DV51 F5H018 RAN GTP-binding nuclear protein Ran 1 NLQYYDIS(1)AK 102.62 0.011985 0 12259 16271 15419 14307 16208 12787 24726 13254 14842 15912 TRUE FALSE 13197.55847 15463.0058 15933.06176 13138.07233 15571.59248 13273.61825 21479.4465 14986.34331 16132.93033 15392.79274 0.857385576 1.004561424 1.03509883 0.853521031 1.011615809 0.862326835 1.395422316 0.973594822 1.048083386 1 13.90996739 NLQYYDISAK ddPTM_A459_MK2206_30min_R2 2 NLQYYDISAK 10 0 F5H018;B5MDF5;J3KQE5;P62826;B4DV51 F5H018 RAN GTP-binding nuclear protein Ran 0 ; 156.48 0.0070368 8162200 61867 63322 59479 62761 68181 65108 66061 51113 59367 64834 FALSE TRUE 66603.58509 60177.52156 61462.00017 57633.22554 65503.87136 67585.73056 57387.11135 57793.6446 64530.63435 62718.47189 1.061945278 0.959486412 0.979966481 0.918919479 1.04441115 1.077604867 0.914995369 0.921477244 1.0288936 1 15.93660279 NLS(ph)DSEKELYIQHAK ddPTM_A459_MK2206_30min_R2 1 NLSDSEKELYIQHAK 15 1 Q00059-2;Q00059 Q00059-2 TFAM "Transcription factor A, mitochondrial" 1 NLS(0.773)DS(0.21)EKELY(0.017)IQHAK 69.935 0.029236 3461900 18460 22938 18913 15889 17059 13828 18003 12134 15118 13168 TRUE FALSE 19873.31179 21798.93227 19543.54998 14590.81787 16389.17795 14354.23423 15639.18447 13719.95546 16432.93631 12738.32924 1.560119182 1.711286611 1.534231814 1.145426343 1.286603419 1.126853762 1.227726508 1.07706083 1.290038592 1 13.63688845 -5.681929528 4.073966142 1.173146296 1.632895276 0.826574372 0.09223973 0.076903914 2.424194741 0.023722277 0.042151969 2.08E-06 5.681929528 0.459748981 NLS(ph)EAQLR ddPTM_A459_MK2206_30min_R1 1 NLSEAQLR 8 0 Q9NZT1 Q9NZT1 CALML5 Calmodulin-like protein 5 1 NLS(1)EAQLR 93.111 0.024521 2178700 3985.8 5627.2 5696.5 4805.7 3724.3 2622.1 3407.7 4119.1 4149.7 4092.4 TRUE FALSE 3646.78678 5260.868257 5309.837451 5175.835847 3575.953245 2770.561036 3180.378551 4083.087143 4581.076165 4599.397408 0.792883601 1.14381685 1.154463722 1.125329122 0.777482989 0.602374787 0.691477224 0.887743933 0.996016599 1 12.16722914 -6.265771063 24.88963305 0.802344118 1.067697179 0.34579786 0.15130561 366.804074 2107634.785 0.048715207 0.05718728 5.42E-07 6.265771063 0.265353061 NLS(ph)FEIK ddPTM_A459_MK2206_30min_R1 2 NLSFEIK 7 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 NLS(1)FEIK;NLS(1)FEIK 88.056 0.032778 114898400 10186.1 9899.7 11164.1 10409.6 8951.1 7823.3 9707.7 9651.7 10378.7 9190.7 TRUE FALSE 9319.718706 9255.227731 10406.312 11211.3492 8594.558733 8266.248485 9060.117046 9567.316204 11457.60301 10329.3133 0.902259273 0.896015781 1.007454387 1.085391533 0.832055189 0.800270864 0.877126754 0.926229646 1.109231821 1 13.33445673 -8.200257641 7.797512023 1.054155272 0.915676727 0.31952383 0.08102458 0.354980111 41.15554953 0.06137955 0.022874866 6.31E-09 8.200257641 -0.138478546 NLS(ph)FEIK ddPTM_A459_MK2206_30min_R2 4 NLSFEIK 7 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 NLS(1)FEIK;NLS(1)FEIK;NLS(1)FEIK;NLS(1)FEIK 96.015 0.023418 145328400 352704 387714 370849 322295 323677 226793 400944 281290 255036 325426 TRUE FALSE 379707.2894 368460.6865 383212.9206 295962.4675 310967.8146 235423.7665 348299.5712 318055.5688 277218.5703 314807.3763 1.206157536 1.170432189 1.217293334 0.940138287 0.987803457 0.74783434 1.106389486 1.010318032 0.880597442 1 18.26410982 -5.762765451 24.99999964 0.95298283 1.195208175 0.614169675 0.088857221 23.21500668 437681.5697 0.024837089 0.039249057 1.73E-06 5.762765451 0.242225345 NLS(ph)FNELYPSGTLK ddPTM_A459_MK2206_30min_R1 1 NLSFNELYPSGTLK 14 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 NLS(1)FNELYPSGTLK 228.51 3.37E-13 24801000 4645 4734.9 4256.4 3586.7 4177.3 3588.9 3390.7 3543.7 3447.5 2515 TRUE FALSE 4249.918358 4426.657149 3967.487427 3862.948255 4010.909295 3792.100417 3164.51259 3512.717805 3805.879962 2826.577187 1.503556449 1.566083944 1.403636683 1.366652315 1.418998679 1.341587427 1.119556403 1.24274611 1.346462421 1 11.46484038 -1.522878749 0.079519633 0.714364552 2.962579212 0.771707111 0.07730037 93.63572293 0.545281053 2.344812092 23.15244775 0.03 1.522878749 2.24821466 NLS(ph)FNELYPSGTLK ddPTM_A459_MK2206_30min_R2 1 NLSFNELYPSGTLK 14 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 NLS(0.966)FNELY(0.033)PS(0.001)GTLK 116 0.0027152 13794000 42235 44901 37873 50164 45842 42920 59997 35360 33840 51723 TRUE FALSE 45468.54407 42671.28163 39135.66692 46065.44073 44042.01274 44553.35068 52119.32183 39981.67341 36783.34203 50035.28275 0.908729632 0.852823833 0.782161402 0.920659147 0.880219124 0.890438671 1.04165139 0.799069601 0.73514808 1 15.61065816 -4.726920423 21.31917741 0.875647302 0.90873104 0.009860445 0.089527317 5383.093209 3323444.943 0.0225495 2.699856621 1.88E-05 4.726920423 0.033083737 NLS(ph)GSTLYPVSNIPR ddPTM_A459_MK2206_30min_R1 1 NLSGSTLYPVSNIPR 15 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 NLS(0.333)GS(0.333)T(0.333)LYPVSNIPR 191.15 2.83E-05 28629000 876.66 1048.9 1377.3 933.62 1231.6 1019.5 1059.2 935.45 1232.7 974.21 TRUE FALSE 802.0954635 980.6164194 1283.812713 1005.527574 1182.542764 1077.223209 988.5427006 927.2714593 1360.843576 1094.90249 0.732572509 0.895619864 1.172536117 0.918371804 1.080043908 0.9838531 0.902859122 0.846898667 1.242890202 1 10.09658668 -4.923104279 4.041074559 1.00792234 0.740885912 0.367624012 0.115881645 0.241608897 7.257274247 0.028434956 0.142800547 1.19E-05 4.923104279 -0.267036428 NLS(ph)GSTLYPVSNIPR ddPTM_A459_MK2206_30min_R2 1 NLSGSTLYPVSNIPR 15 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 NLS(0.606)GS(0.382)T(0.012)LYPVSNIPR 180.02 2.01E-05 12509000 20698 21734 21462 23352 30325 19897 26846 20700 18051 31439 TRUE FALSE 22282.65479 20654.72116 22177.53237 21444.0669 29134.28813 20654.19428 23321.08795 23405.56107 19621.04335 30413.148 0.732665188 0.67913789 0.729208708 0.705091985 0.957950427 0.679120566 0.766809406 0.769586926 0.64515003 1 14.89240753 -11.66536746 2.43666915 1.570460444 0.743560861 0.47465936 0.081836946 19322972.53 4072472.18 61091134.29 0.021386531 2.16E-12 11.66536746 -0.826899583 NLS(ph)NEELTK ddPTM_A459_MK2206_30min_R1 2 NLSNEELTK 9 0 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 NLS(1)NEELTK;NLS(1)NEELTK 146.5 0.0017383 34070000 5919.9 5878.4 6494.9 5159.8 5302.3 4239.9 5845.1 6110.1 6270.7 5199.7 TRUE FALSE 5416.381418 5495.715092 6054.044284 5557.20869 5091.098163 4479.959474 5455.184044 6056.68004 6922.561705 5843.878092 0.926847093 0.940422611 1.03596348 0.950945349 0.871184868 0.766607278 0.933486968 1.036414508 1.184583524 1 12.51271037 -7.855353265 3.643484314 1.096538885 0.91647326 0.47482267 0.076346747 0.210211588 5.312168442 0.050088438 0.02230306 1.40E-08 7.855353265 -0.180065625 NLS(ph)NEELTK ddPTM_A459_MK2206_30min_R2 1 NLSNEELTK 9 0 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 NLS(1)NEELTK 96.745 0.02121 49084000 178540 196230 161610 170650 179000 118420 173260 136530 146600 217930 TRUE FALSE 192209.1597 186485.5035 166997.9967 156707.3491 171971.5606 122926.5561 150510.7539 154374.9398 159351.003 210818.9619 0.911726146 0.884576519 0.792139356 0.743326633 0.81573099 0.583090605 0.713933664 0.732263068 0.755866557 1 17.68564511 -5.304946266 1.715902159 0.743280387 0.919694766 0.207908793 0.098984353 0.574819035 2.957154476 0.027766911 0.117191408 4.96E-06 5.304946266 0.17641438 NLS(ph)PGAVESDVR ddPTM_A459_MK2206_30min_R1 2 NLSPGAVESDVR 12 0 A0A3B3IU78;A0A3B3ISK1;A0A3B3ITV3;A0A3B3ISC6;A0A3B3IT15;A0A3B3IS84;P53621;P53621-2 A0A3B3IU78 COPA Coatomer subunit alpha;Xenin;Proxenin 1 NLS(0.999)PGAVES(0.001)DVR;NLS(1)PGAVESDVR 127.05 0.0026482 35809000 4775.3 4762.7 5333.2 4237.1 4611.4 4433.2 5040.7 4462.2 4335.8 3834.2 TRUE FALSE 4369.135659 4452.647364 4971.197243 4563.442176 4427.718173 4684.203953 4704.4441 4423.187456 4786.521926 4309.209643 1.013906498 1.033286318 1.153621582 1.058997486 1.027501222 1.087021598 1.091718549 1.026449819 1.110765621 1 12.07320757 -9.86066638 8.830518071 1 1.06730596 0.186328354 0.042018235 0 0 0.040537964 0.009831901 1.38E-10 9.86066638 0.06730596 NLS(ph)PGAVESDVR ddPTM_A459_MK2206_30min_R2 2 NLSPGAVESDVR 12 0 A0A3B3IU78;A0A3B3ISK1;A0A3B3ITV3;A0A3B3ISC6;A0A3B3IT15;A0A3B3IS84;P53621;P53621-2 A0A3B3IU78 COPA Coatomer subunit alpha;Xenin;Proxenin 1 NLS(0.998)PGAVES(0.002)DVR;NLS(0.997)PGAVES(0.003)DVR 160.04 0.00046905 40355000 43289 52112 50022 59370 51720 43836 54574 39717 41967 48773 TRUE FALSE 46603.23912 49524.19386 51689.70851 54519.28108 49689.21293 45504.2097 47408.36824 44908.14827 45617.2138 47181.541 0.987743048 1.049651894 1.095549391 1.155521416 1.053149428 0.964449417 1.004807542 0.951816056 0.966844508 1 15.52593492 -6.676667304 4.944535724 0.976347624 1.075588215 0.541546826 0.041846465 0.169600949 7.192285517 0.015191409 0.015025794 2.11E-07 6.676667304 0.099240591 NLS(ph)PPNCTELQIDSCSSSEEIKK ddPTM_A459_MK2206_30min_R1 1 NLSPPNCTELQIDSCSSSEEIKK 23 1 P38398-8;P38398-4;P38398;P38398-7;Q5YLB2;A0A0A0MSN1;A0A0U1RRA9 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 NLS(0.906)PPNCT(0.094)ELQIDSCSSSEEIKK 107.34 9.88E-06 6371600 683.51 452.64 522.75 415.96 574.5 407.75 490.59 421.41 548.66 409.81 TRUE FALSE 625.3738852 423.1730537 487.2671865 447.9973113 551.6164485 430.8364526 457.8636362 417.7256568 605.6951704 460.5803567 1.35779539 0.918782244 1.057941745 0.972680022 1.197655177 0.935420815 0.994101528 0.906954999 1.31506948 1 8.847309073 -6.78049907 24.99172712 1.022231124 1.081331619 0.041436579 0.153818853 1057.579035 1386724.398 0.05237119 0.046255889 1.66E-07 6.78049907 0.059100495 NLS(ph)PPNCTELQIDSCSSSEEIKK ddPTM_A459_MK2206_30min_R2 1 NLSPPNCTELQIDSCSSSEEIKK 23 1 P38398-8;P38398-4;P38398;P38398-7;Q5YLB2;A0A0A0MSN1;A0A0U1RRA9 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 NLS(0.507)PPNCT(0.493)ELQIDSCSSSEEIKK 88.186 0.00011135 4634800 21967 25576 25500 23921 26160 16111 31599 17590 23361 29127 TRUE FALSE 23648.81041 24305.93303 26350.15727 21966.57778 25132.82696 16724.11539 27450.01334 19889.0734 25392.89755 28176.58838 0.839307091 0.862628673 0.935179125 0.779603886 0.891975516 0.593546499 0.97421352 0.705872305 0.90120554 1 14.78220932 -8.52756138 23.73346636 1.000000011 0.824725151 0.219285564 0.105035361 381.069749 1931420.123 0.0951596 0.024570103 2.97E-09 8.52756138 -0.175274859 NLS(ph)PSFSR ddPTM_A459_MK2206_30min_R1 1 NLSPSFSR 8 0 Q1ED39;H3BNU8 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 NLS(0.762)PS(0.238)FSR 97.597 0.020141 5892100 2789.1 2924.7 2872.2 2162.2 2464.3 2685.9 3039.8 2297.8 2581.8 3123.8 TRUE FALSE 2551.872399 2734.301498 2677.243066 2328.733019 2366.141713 2837.973337 2837.020488 2277.710577 2850.187349 3510.799927 0.726863522 0.778825782 0.762573522 0.663305533 0.673960853 0.808355188 0.808083783 0.648772537 0.811834171 1 11.77758407 -8.541396949 21.46566658 1.000000003 0.736497909 0.685610728 0.054604177 313.1196607 362958.2139 0.054565133 0.014088657 2.87E-09 8.541396949 -0.263502094 NLS(ph)PSFSR ddPTM_A459_MK2206_30min_R2 2 NLSPSFSR 8 0 Q1ED39;H3BNU8 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 NLS(0.979)PS(0.021)FSR;NLS(0.5)PS(0.5)FS(0.001)R 108.43 0.012879 12635000 112898 95783 84303 115836 105725 82729 125785 94238 75511 116830 TRUE FALSE 121541.5577 91026.5555 87113.61994 106371.8283 101573.7053 85877.31007 109269.2784 106555.2302 82078.81029 113017.8467 1.07541916 0.805417535 0.770795255 0.941194965 0.898740405 0.759856187 0.966832068 0.942817735 0.726246453 1 16.78619108 NLS(ph)PSNSCEPK ddPTM_A459_MK2206_30min_R2 1 NLSPSNSCEPK 11 0 A0A0G2JNU3;A6H8Y1-2;A6H8Y1-7;A6H8Y1-6;A6H8Y1 A0A0G2JNU3 BDP1 Transcription factor TFIIIB component B homolog 1 NLS(0.495)PS(0.495)NS(0.011)CEPK 120.84 0.0046146 5495800 28007 28143 22530 23993 22822 18976 29171 25271 15985 27246 TRUE FALSE 30151.23745 26745.45954 23281.13896 22032.69515 21925.89361 19698.14498 25340.81266 28574.00647 17375.34641 26356.96525 1.143957097 1.01473972 0.883301197 0.835934446 0.831882328 0.74736013 0.961446525 1.084115952 0.659231677 1 14.68589665 -4.990046432 2.165494608 0.872888976 1.161967038 0.358923336 0.11548098 0.475353617 3.516082743 0.031097727 0.227217439 1.02E-05 4.990046432 0.289078062 NLS(ph)SDEATNPISR ddPTM_A459_MK2206_30min_R1 4 NLSSDEATNPISR 13 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 NLS(0.5)S(0.5)DEATNPISR;NLS(0.498)S(0.498)DEAT(0.004)NPISR;NLS(0.499)S(0.499)DEAT(0.003)NPISR;NLS(0.498)S(0.498)DEAT(0.004)NPISR 238.83 1.05E-17 244283000 6513.2 6673.7 7039.6 5933.5 6231.8 5825.5 6159.7 6888.1 5801 5217.1 TRUE FALSE 5959.218138 6239.240917 6561.771565 6390.499198 5983.57421 6155.334776 5748.797652 6827.878068 6404.034709 5863.433735 1.016335889 1.064093362 1.11910049 1.08989024 1.020489781 1.049783293 0.980448985 1.164484563 1.092198701 1 12.51753007 -7.764441604 24.99997484 1.096256189 1.052453208 0.081142165 0.052377079 176.0342981 1465809.24 0.027282881 0.013996115 1.72E-08 7.764441604 -0.043802981 NLS(ph)SDEATNPISR ddPTM_A459_MK2206_30min_R2 4 NLSSDEATNPISR 13 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 NLS(0.499)S(0.499)DEAT(0.002)NPISR;NLS(0.495)S(0.495)DEAT(0.01)NPISR;NLS(0.969)S(0.031)DEATNPISR;NLS(0.916)S(0.084)DEATNPISR 207.85 1.05E-05 261093000 293194 371473 380848 402053 410954 354707 389324 307014 364646 335031 TRUE FALSE 315641.1581 353026.191 393545.2822 369203.9838 394817.8811 368205.6234 338205.2911 347141.7839 396362.25 324098.9659 0.973903626 1.089254296 1.214275032 1.139170508 1.218201607 1.13609009 1.043524746 1.071098092 1.222966722 1 18.30607489 -10.23962892 14.99186988 0.999993327 1.124619663 0.184607878 0.077600312 0 0 0.077576248 0.018815004 5.76E-11 10.23962892 0.124626336 NLSDIGWPVFEIPSPRPS(ph)K ddPTM_A459_MK2206_30min_R2 2 NLSDIGWPVFEIPSPRPSK 19 1 F5H4R1;J3KNB8;F5H538;Q9Y6R4-2;Q9Y6R4;F5H1X6 F5H4R1 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 1 NLSDIGWPVFEIPS(0.17)PRPS(0.83)K;NLSDIGWPVFEIPS(0.384)PRPS(0.616)K 102.19 0.00061185 15047700 20100.4 29744 25592 33575 31250 31829 29947 26186 27757 25179 TRUE FALSE 21639.30208 28266.95621 26445.22451 30831.8151 30022.96798 33040.2749 26014.92293 29608.60011 30171.25369 24357.41129 0.888407303 1.160507407 1.085715727 1.265808371 1.232600937 1.356477275 1.068049581 1.215588954 1.238688846 1 14.57207319 -4.15421949 1.262324701 1.201516813 8.15E-12 0.424947338 0.100862687 5.376996442 2.419311847 0.028487251 12.36492522 7.01E-05 4.15421949 -1.201516813 NLSEGNNANYTEY(ph)VATR ddPTM_A459_MK2206_30min_R2 2 NLSEGNNANYTEYVATR 17 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 NLSEGNNANYT(0.001)EY(0.999)VATR;NLSEGNNANYTEY(1)VATR 236.12 2.27E-17 11968900 25371 34363 32252 34160 27691 23848.2 40373 28684 31181 32371 TRUE FALSE 27313.42327 32656.58339 33327.26558 31369.01873 26603.7122 24755.75996 35071.9766 32433.09729 33893.06702 31314.73692 0.872222664 1.042850319 1.064267781 1.001733427 0.84955886 0.790546637 1.119983115 1.035713548 1.082335997 1 14.93455414 -7.304839649 24.99995454 1.062484292 0.946452027 0.325008253 0.085880849 680.1246174 391771.1037 0.039550615 0.026665165 4.96E-08 7.304839649 -0.116032265 NLSELQDT(ph)SLQQLVSQR ddPTM_A459_MK2206_30min_R2 1 NLSELQDTSLQQLVSQR 17 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 NLSELQDT(0.5)S(0.5)LQQLVSQR 171.3 1.71E-06 1870700 20685 23882 22531 25127 26813 23648 23264 19112 20395 22116 TRUE FALSE 22268.6595 22696.05461 23282.17229 23074.04372 25760.1869 24547.94121 20209.40885 21610.00402 22168.92023 21394.35673 1.040866046 1.060843048 1.08823895 1.07851075 1.204064568 1.147402631 0.944613998 1.010079634 1.036204103 1 14.38494268 -7.257905183 24.99937303 0.998564403 1.10415615 0.536579456 0.048069446 273.0645051 1931550.067 0.020922343 0.015566273 5.52E-08 7.257905183 0.105591747 NLSES(ph)PVITK ddPTM_A459_MK2206_30min_R1 1 NLSESPVITK 10 0 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-2;F5GXF5 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 NLS(0.003)ES(0.853)PVIT(0.145)K 123.95 0.0039947 14391000 5043.4 4566 4019.1 4125.3 4413.2 3930.2 4451.7 3482.2 3889.4 3200.8 TRUE FALSE 4614.432346 4268.75257 3746.29469 4443.031321 4237.412899 4152.724528 4154.735216 3451.755493 4293.717048 3597.339269 1.282734822 1.18664164 1.04140711 1.235088211 1.177929737 1.15438779 1.154946727 0.959530151 1.193581347 1 11.81271451 -1.522878745 0.051944186 0.733912942 1.900002378 0.35025003 0.079878918 529.3621804 2.079636675 10.69318548 48.87258435 0.03 1.522878745 1.166089437 NLSES(ph)PVITK ddPTM_A459_MK2206_30min_R2 2 NLSESPVITK 10 0 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-2;F5GXF5 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 NLSES(0.999)PVITK;NLS(0.115)ES(0.884)PVIT(0.001)K 115.06 0.0067635 29639000 243232 248994 215437 277697 254348 221737 278302 204584 215086 255452 TRUE FALSE 261854.0289 236629.32 222619.5621 255008.2668 244361.0195 230175.3569 241760.6131 231323.8312 233793.7915 247116.6222 1.059637456 0.957561325 0.900868424 1.0319349 0.988848979 0.93144425 0.978325986 0.93609175 0.94608687 1 17.91483253 -6.732573115 24.8954142 0.955641502 0.983717672 0.095946083 0.043822885 549.5328814 473937.6045 0.014646135 0.014643551 1.85E-07 6.732573115 0.02807617 NLSESPVIT(ph)K ddPTM_A459_MK2206_30min_R1 1 NLSESPVITK 10 0 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-2;F5GXF5 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 NLS(0.001)ES(0.043)PVIT(0.956)K 107.09 0.026897 11823000 4783.5 5234 5247.4 4797.3 4395.1 4703.6 4675.1 4373.5 4171.6 3436.4 TRUE FALSE 4376.638206 4893.265649 4891.221108 5166.788877 4220.03386 4969.913767 4363.232609 4335.262951 4605.252748 3862.127175 1.133219598 1.266987188 1.266457806 1.337809099 1.09267087 1.286833276 1.129748558 1.122506524 1.192413543 1 11.91517996 -8.817211439 0.382193027 0.982185815 1.247620936 0.434567502 0.074998091 1.820072475 0.598258292 0.153945676 0.062518168 1.52E-09 8.817211439 0.265435121 NLSFNELY(ph)PSGTLK ddPTM_A459_MK2206_30min_R1 1 NLSFNELYPSGTLK 14 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 NLS(0.14)FNELY(0.624)PS(0.235)GT(0.001)LK 136.5 0.0083142 25965000 6464.2 6650 6862.8 5307.5 6035.2 5704.7 5313.8 5654 5207.6 4243.5 TRUE FALSE 5914.385845 6217.083791 6396.972257 5716.28457 5794.805204 6027.695184 4959.326098 5604.567674 5748.948656 4769.216817 1.240116789 1.303585899 1.341304559 1.198579303 1.215043356 1.263875268 1.03986174 1.175154724 1.205428245 1 12.21953666 -8.300334973 0.116587168 0.810242973 1.476260198 0.602746065 0.063928217 6.124609913 0.614200487 1.727974755 1.448055216 5.01E-09 8.300334973 0.666017225 NLSFNELY(ph)PSGTLK ddPTM_A459_MK2206_30min_R2 1 NLSFNELYPSGTLK 14 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 NLS(0.08)FNELY(0.917)PS(0.003)GTLK 138.25 0.0081147 12949000 34859 36043 31303 38958 35888 31074 50291 30793 32015 39876 TRUE FALSE 37527.83184 34253.15703 32346.6264 35775.00678 34478.8568 32256.54284 43687.73129 34817.75083 34799.60683 38574.84939 0.972857508 0.88796606 0.838541871 0.927417925 0.893817017 0.836206579 1.132544442 0.902602379 0.902132021 1 15.2353729 NLSGST(ph)LYPVSNIPR ddPTM_A459_MK2206_30min_R1 1 NLSGSTLYPVSNIPR 15 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 NLS(0.23)GS(0.23)T(0.54)LYPVSNIPR 183.73 4.90E-05 35734000 1492.7 1428.4 1516.1 1480.6 1422.7 1348.6 1296.7 1562.4 1190.4 1264.8 TRUE FALSE 1365.738027 1335.4109 1413.191356 1594.636069 1366.030846 1424.956567 1210.199509 1548.740102 1314.14634 1421.492973 0.960777192 0.939442492 0.994159931 1.121803695 0.960983186 1.002436589 0.851358067 1.089516537 0.924483177 1 10.47319125 NLSPGAVES(ph)DVR ddPTM_A459_MK2206_30min_R2 1 NLSPGAVESDVR 12 0 A0A3B3IU78;A0A3B3ISK1;A0A3B3ITV3;A0A3B3ISC6;A0A3B3IT15;A0A3B3IS84;P53621;P53621-2 A0A3B3IU78 COPA Coatomer subunit alpha;Xenin;Proxenin 1 NLS(0.136)PGAVES(0.864)DVR 81.789 0.03757 4947300 11396 15837 8936 16197 13921 11604 14942 12733 13279 12089 TRUE FALSE 12268.48652 15050.55761 9233.92178 14873.65329 13374.39159 12045.59835 12980.09745 14397.24682 14433.98342 11694.53692 1.049078438 1.286973372 0.789592768 1.271846281 1.143644394 1.030019267 1.109928297 1.231108758 1.234250105 1 13.51354711 -7.601207127 9.424692085 1.174186282 1.097748818 0.028470556 0.143989194 1.083426983 120.4049359 0.065202267 0.03756435 2.50E-08 7.601207127 -0.076437464 NLSPPNCT(ph)ELQIDSCSSSEEIKK ddPTM_A459_MK2206_30min_R1 1 NLSPPNCTELQIDSCSSSEEIKK 23 1 P38398-8;P38398-4;P38398;P38398-7;Q5YLB2;A0A0A0MSN1;A0A0U1RRA9 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 NLS(0.215)PPNCT(0.785)ELQIDSCSSSEEIKK 85.737 0.00033608 8539200 1091 890.34 917.45 949.62 828.61 762.2 716.5 1010.7 938.94 875.41 TRUE FALSE 998.2047209 832.3787042 855.1760502 1022.759897 795.6047091 805.3551053 668.7035923 1001.863556 1036.546173 983.8623998 1.014577568 0.846031624 0.869202899 1.039535505 0.808654451 0.818564776 0.679671865 1.018296417 1.053547908 1 9.942312748 -7.955417875 24.99966405 1.02982455 0.868166792 0.351398659 0.097097429 139.9765035 78492.37814 0.05485148 0.026349779 1.11E-08 7.955417875 -0.161657758 NLSPS(ph)FSR ddPTM_A459_MK2206_30min_R1 2 NLSPSFSR 8 0 Q1ED39;H3BNU8 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 NLS(0.284)PS(0.716)FSR;NLS(0.189)PS(0.795)FS(0.016)R 102.06 0.016528 14984400 7815.3 8337.6 7782.3 6253.9 6742.6 6405.2 7627.7 6110.9 7239.8 8246.2 TRUE FALSE 7150.567695 7794.820725 7254.059159 6735.576462 6474.027964 6767.856889 7118.870051 6057.473046 7992.403118 9267.801512 0.771549508 0.841064703 0.782716284 0.726771765 0.698550563 0.730254838 0.768129318 0.653604098 0.862383933 1 13.17801143 -8.536015547 6.34940425 0.999969364 0.749126408 0.735397754 0.047960488 0.073620658 19.44106912 0.049469773 0.012812493 2.91E-09 8.536015547 -0.250842955 NLSPS(ph)FSR ddPTM_A459_MK2206_30min_R2 1 NLSPSFSR 8 0 Q1ED39;H3BNU8 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 NLS(0.07)PS(0.929)FS(0.001)R 92.239 0.025743 11653000 82684 65299 56585 65444 57604 52503 68100 53512 39253 61556 TRUE FALSE 89014.35061 62056.34661 58471.51566 60097.01586 55342.17752 54501.03846 59158.3882 60506.20213 42667.15499 59547.43276 1.494847829 1.042133031 0.981931763 1.009229333 0.929379739 0.915254209 0.993466644 1.016100935 0.716523837 1 15.86175169 NLT(ph)FEGPLPEK ddPTM_A459_MK2206_30min_R1 1 NLTFEGPLPEK 11 0 Q9HAT2-2;Q9HAT2 Q9HAT2-2 SIAE Sialate O-acetylesterase 1 NLT(1)FEGPLPEK 104.01 0.029745 8861000 1656.4 1801.6 1687.7 1878.2 1453.2 1212.5 1432.8 1168.1 1672.6 1511.1 TRUE FALSE 1515.514482 1684.315513 1573.143626 2022.859289 1395.315967 1281.150702 1337.220526 1157.887425 1846.472755 1698.306476 0.892368076 0.991761815 0.926301376 1.191103795 0.821592561 0.754369556 0.787384695 0.681789442 1.087243546 1 10.72988112 NLTANDPS(ph)QEYVASEGEEDPEVEFLK ddPTM_A459_MK2206_30min_R2 1 NLTANDPSQEYVASEGEEDPEVEFLK 26 0 Q86X95 Q86X95 CIR1 Corepressor interacting with RBPJ 1 1 NLT(0.012)ANDPS(0.396)QEY(0.283)VAS(0.31)EGEEDPEVEFLK 54.141 0.0080733 2303000 15594 15481 12338 11686 14345 10851 11438 10569 13529 12986 TRUE FALSE 16787.88863 14712.23605 12749.34276 10731.21642 13781.74322 11263.94241 9936.17686 11950.40459 14705.72797 12562.26788 1.336374036 1.171144907 1.014891808 0.854241966 1.097074457 0.896648799 0.790954066 0.951293564 1.170626841 1 13.61680932 -5.044187225 1.936368523 0.957542467 1.359546589 0.560780879 0.105033346 0.349432699 2.033051047 0.029951879 0.20929664 9.03E-06 5.044187225 0.402004122 NLTANDPSQEYVAS(ph)EGEEDPEVEFLK ddPTM_A459_MK2206_30min_R2 1 NLTANDPSQEYVASEGEEDPEVEFLK 26 0 Q86X95 Q86X95 CIR1 Corepressor interacting with RBPJ 1 1 NLTANDPSQEY(0.01)VAS(0.99)EGEEDPEVEFLK 103.74 2.57E-07 2691700 12352 15390 13290 18374 12714 13184 14959 11077 12048 14397 TRUE FALSE 13297.67862 14625.75498 13733.08197 16872.78542 12214.78448 13685.72636 12994.86533 12524.80193 13095.91326 13927.22707 0.954797287 1.050155563 0.986060032 1.211496398 0.877043536 0.982659814 0.933054747 0.899303348 0.940310171 1 13.76562042 -6.332798763 25 0.935606652 1.045990677 0.372152429 0.07103122 163.3389358 57223.38702 0.021281763 0.024131254 4.65E-07 6.332798763 0.110384025 NLTEQNSYSNIPHEGKHT(ph)PLYER ddPTM_A459_MK2206_30min_R1 1 NLTEQNSYSNIPHEGKHTPLYER 23 1 Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A0C4DH52;Q9NZB2-2;Q9NZB2-5;Q5T035 Q9NZB2-4 FAM120A;C9orf129 Constitutive coactivator of PPAR-gamma-like protein 1;Putative uncharacterized protein C9orf129 1 NLTEQNSYSNIPHEGKHT(0.779)PLY(0.221)ER 87.496 0.0001315 5001600 1077.6 850.38 1023.9 761.34 916.63 1067.8 905.76 836 845.37 626.2 TRUE FALSE 985.9444613 795.0201074 954.4005207 819.9785387 880.1186861 1128.257913 845.3384031 828.6909401 933.2492367 703.7783836 1.400930299 1.129645533 1.356109456 1.165109014 1.25056226 1.603143745 1.201142892 1.177488481 1.326055557 1 9.458977392 -10.47365659 5.538291633 0.999999559 1.285698915 0.29602469 0.134023946 7.26E-07 1.37E-07 0.128866458 0.031254659 3.36E-11 10.47365659 0.285699356 NLTEQNSYSNIPHEGKHT(ph)PLYER ddPTM_A459_MK2206_30min_R2 1 NLTEQNSYSNIPHEGKHTPLYER 23 1 Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A0C4DH52;Q9NZB2-2;Q9NZB2-5;Q5T035 Q9NZB2-4 FAM120A;C9orf129 Constitutive coactivator of PPAR-gamma-like protein 1;Putative uncharacterized protein C9orf129 1 NLTEQNSYSNIPHEGKHT(0.969)PLY(0.031)ER 136.46 2.84E-06 3456100 12249 13573 12302 18539 18070 16964 18467 15169 16354 15497 TRUE FALSE 13186.79286 12898.98456 12712.14254 17024.3044 17360.48101 17609.57691 16042.26072 17151.64038 17776.44136 14991.33416 0.879627705 0.860429393 0.847966059 1.135609694 1.158034423 1.174650416 1.07010227 1.144103667 1.185781143 1 13.87184116 -5.762757659 24.99866758 1.131322344 0.86244984 0.840065774 0.05219269 11.59926982 219965.721 0.013870944 0.021918453 1.73E-06 5.762757659 -0.268872503 NLVS(ph)PAYCTQESR ddPTM_A459_MK2206_30min_R1 2 NLVSPAYCTQESR 13 0 Q9NUQ3 Q9NUQ3 TXLNG Gamma-taxilin 1 NLVS(1)PAYCTQESR;NLVS(0.976)PAYCT(0.023)QESR 112.03 0.0050487 22848700 4630.6 5383.5 4862.2 4443.4 4623.4 4208.7 4772.4 4367.7 4235.8 3751.8 TRUE FALSE 4236.743154 5033.033172 4532.167411 4785.631438 4439.240188 4446.992957 4454.041904 4329.513659 4676.126568 4216.601309 1.004776796 1.193623206 1.074838971 1.134949948 1.052800553 1.054639182 1.056310895 1.026778048 1.108980012 1 12.0418649 -6.284632987 22.31754346 1.051812682 1.106644914 0.195725261 0.051345613 304.4744436 292972.1943 0.014784562 0.016782238 5.19E-07 6.284632987 0.054832232 NLVS(ph)PAYCTQESR ddPTM_A459_MK2206_30min_R2 4 NLVSPAYCTQESR 13 0 Q9NUQ3 Q9NUQ3 TXLNG Gamma-taxilin 1 NLVS(0.973)PAYCT(0.025)QES(0.002)R;NLVS(0.555)PAY(0.001)CT(0.051)QES(0.393)R;NLVS(0.981)PAYCT(0.019)QESR;NLVS(0.993)PAYCT(0.006)QESR 133.87 0.0012792 60153000 124825 155385 140819 173411 163998 144290 183742 134590 120647 162862 TRUE FALSE 134381.698 147668.8069 145513.8352 159242.7666 157558.6145 149781.0571 159616.4547 152181.3751 131140.658 157547.8263 0.852958122 0.937295108 0.923616902 1.010758259 1.000068476 0.950702149 1.013130162 0.965937638 0.832386337 1 17.26543032 -4.517595401 1.332787353 0.96653081 0.740574458 0.294680158 0.051104825 3.116822553 3.134009743 0.01503314 1.129877455 3.04E-05 4.517595401 -0.225956352 NLVSPAYCT(ph)QESREEIPGGEAR ddPTM_A459_MK2206_30min_R1 1 NLVSPAYCTQESREEIPGGEAR 22 1 Q9NUQ3 Q9NUQ3 TXLNG Gamma-taxilin 1 NLVS(0.008)PAY(0.06)CT(0.756)QES(0.176)REEIPGGEAR 72.082 0.0043681 11170000 1213.7 840.58 1298.1 1085.2 1204.1 1076.1 1100.3 1046.9 733.35 703.81 TRUE FALSE 1110.468442 785.8580892 1209.988589 1168.782292 1156.138147 1137.027852 1026.900995 1037.747064 809.5843568 791.0032963 1.403873343 0.993495341 1.529688428 1.477594717 1.461609772 1.437450207 1.298225936 1.311937723 1.023490497 1 9.627539897 -8.21965972 2.341078834 0.986198255 1.373339637 0.50376546 0.140932307 0.264367853 2.60794281 0.134832653 0.039704856 6.03E-09 8.21965972 0.387141382 NLVSPAYCTQES(ph)R ddPTM_A459_MK2206_30min_R1 1 NLVSPAYCTQESR 13 0 Q9NUQ3 Q9NUQ3 TXLNG Gamma-taxilin 1 NLVS(0.084)PAYCT(0.042)QES(0.874)R 142.39 0.00077791 7339300 2294.9 2419.8 2110.6 1914.7 2197.1 1837.1 2195 1742.2 1864.4 2170.9 TRUE FALSE 2099.706704 2262.27058 1967.338352 2062.170526 2109.584855 1941.115014 2048.575555 1726.968129 2058.211052 2439.847481 0.860589328 0.927218032 0.806336612 0.845204687 0.864638003 0.795588671 0.839632629 0.707818067 0.84358185 1 11.25257525 -5.268032607 24.89864295 0.8271887 0.89390368 0.07620835 0.070651802 890.2183866 3361829.837 0.017497116 0.037905554 5.39E-06 5.268032607 0.06671498 NLVSPAYCTQES(ph)REEIPGGEAR ddPTM_A459_MK2206_30min_R2 1 NLVSPAYCTQESREEIPGGEAR 22 1 Q9NUQ3 Q9NUQ3 TXLNG Gamma-taxilin 1 NLVS(0.001)PAY(0.01)CT(0.262)QES(0.727)REEIPGGEAR 64.761 0.0040198 12989000 8865.5 9870.3 12355 10785 16825 17352 13378 10462 11018 13443 TRUE FALSE 9544.249496 9380.155255 12766.90953 9903.831 16164.36596 18012.34252 11621.45253 11829.41932 11976.32572 13004.35601 0.733927116 0.72130871 0.981741005 0.761577966 1.242996266 1.385100693 0.893658442 0.909650529 0.920947236 1 13.66670734 -6.240843509 24.88289343 1.062273467 0.807050986 0.384205506 0.160541986 947.9955647 1145320.267 0.052600158 0.067823592 5.74E-07 6.240843509 -0.255222481 NLVTEDVMR ddPTM_A459_MK2206_30min_R2 1 NLVTEDVMR 9 0 P06744-2;P06744;A0A2U3TZU2;K7EQ48;A0A0J9YXP8;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;K7EPY4;K7ERC6;K7EP41;A0A2R8YF08;K7ELR7;K7ENA0;K7ERK8;K7EIL4;A0A0J9YXM3;A0A0J9YXH9;A0A0J9YYI8 P06744-2 GPI Glucose-6-phosphate isomerase 0 139.98 0.032314 2498100 11812 14638 16033 14851 14978 13812 16446 11293 13925 15874 FALSE TRUE 12716.3358 13911.09821 16567.53222 13637.62579 14389.88846 14337.62534 14286.62044 12769.03387 15136.17133 15356.03268 0.828100335 0.905904441 1.078894045 0.888095648 0.937083735 0.933680309 0.93035882 0.831532085 0.985682412 1 13.90651792 NLYPSS(ph)SPYTR ddPTM_A459_MK2206_30min_R2 1 NLYPSSSPYTR 11 0 Q9Y2Z0-2;Q9Y2Z0 Q9Y2Z0-2 SUGT1 Suppressor of G2 allele of SKP1 homolog 1 NLYPS(0.103)S(0.449)S(0.449)PYTR 145.29 0.00070435 17058000 60209 52295 59198 62947 53045 54439 62631 44138 46920 58771 TRUE FALSE 64818.64733 49698.10634 61171.63177 57804.02874 50962.18677 56510.71429 54407.47447 49906.98815 51001.01679 56853.30708 1.140103376 0.87414627 1.075955558 1.016722363 0.896380341 0.993974092 0.956979941 0.877820319 0.897063327 1 15.79495665 -6.240159357 21.60917644 0.934771436 1.019348981 0.263517712 0.072985479 210.9124959 214172.7124 0.020790883 0.026789983 5.75E-07 6.240159357 0.084577544 NLYPSSS(ph)PYTR ddPTM_A459_MK2206_30min_R1 2 NLYPSSSPYTR 11 0 Q9Y2Z0-2;Q9Y2Z0 Q9Y2Z0-2 SUGT1 Suppressor of G2 allele of SKP1 homolog 1 NLYPS(0.075)S(0.315)S(0.607)PYT(0.002)R;NLYPS(0.017)S(0.074)S(0.91)PYTR 154.23 0.00054657 30059000 7984.9 7420.8 6909.6 6770.2 7046 6518.5 7090.3 6498 6570.8 6196.9 TRUE FALSE 7305.742325 6937.704571 6440.595603 7291.641977 6765.3429 6887.571837 6617.319024 6441.188671 7253.858174 6964.618756 1.048979503 0.996135584 0.924759248 1.046954935 0.971387399 0.988937382 0.950133705 0.924844402 1.041529828 1 12.76582867 NLYPSSS(ph)PYTR ddPTM_A459_MK2206_30min_R2 1 NLYPSSSPYTR 11 0 Q9Y2Z0-2;Q9Y2Z0 Q9Y2Z0-2 SUGT1 Suppressor of G2 allele of SKP1 homolog 1 NLYPS(0.007)S(0.026)S(0.967)PYTR 182.37 3.69E-05 19604000 58199 69829 53530 58354 59457 58588 68089 53676 50166 69823 TRUE FALSE 62654.76019 66361.3934 55314.66348 53586.29153 57122.41943 60817.60739 59148.83251 60691.6375 54529.348 67544.68123 0.927604647 0.982481406 0.818934407 0.793345835 0.845698261 0.900405573 0.875699336 0.898540587 0.8073078 1 16.04355455 -10.11445526 15.25762713 0.999996103 0.872504675 0.323670368 0.055409868 0 0 0.057545624 0.013956864 7.68E-11 10.11445526 -0.127491427 NLYSDDIPHALR ddPTM_A459_MK2206_30min_R1 2 NLYSDDIPHALR 12 0 P60228;H0YBR5;E5RIT4 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E 0 ; 158.25 0.00063552 10636900 10407.7 11758.3 12140.4 9837.7 10335.6 10066.2 10625 10550.9 10253.2 10958 FALSE TRUE 9522.470462 10992.83253 11316.34347 10595.40136 9923.911166 10636.13954 9916.225636 10458.65459 11319.05683 12315.55977 0.773206467 0.892597067 0.91886554 0.860326413 0.805802688 0.863634276 0.805178638 0.849222836 0.919085859 1 13.58819458 -8.527567113 2.616584247 0.999376678 0.848390304 0.587128584 0.040867023 0.20080501 3.302317709 0.040671656 0.010993109 2.97E-09 8.527567113 -0.150986374 NMAPGAVCS(ph)PGESK ddPTM_A459_MK2206_30min_R1 2 NMAPGAVCSPGESK 14 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 NMAPGAVCS(0.684)PGES(0.316)K;NMAPGAVCS(0.787)PGES(0.213)K 152.94 0.00037287 44163000 19121.3 18885.2 17782.9 15254.7 13571.6 11669.6 12835.4 13989.6 13619.9 13677.6 TRUE FALSE 17494.93303 17655.77005 16575.84629 16429.61964 13031.01443 12330.32267 11979.17389 13867.2904 15035.73734 15372.08435 1.138097647 1.148560576 1.07830831 1.068795829 0.84770641 0.802124318 0.77928104 0.902108659 0.978119623 1 13.90802518 -6.157159959 3.547182159 0.870267489 1.118822657 0.721216607 0.068137108 0.13187836 3.074720841 0.022113193 0.029274835 6.96E-07 6.157159959 0.248555168 NMAPGAVCS(ph)PGESK ddPTM_A459_MK2206_30min_R2 3 NMAPGAVCSPGESK 14 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 NMAPGAVCS(0.758)PGES(0.242)K;NMAPGAVCS(0.981)PGES(0.019)K;NMAPGAVCS(0.996)PGES(0.004)K 147.75 0.00047253 52512000 232774 221173 204958 183052 206143 137585 229905 151666 136892 187740 TRUE FALSE 250595.3564 210189.8704 211791.1974 168096.066 198048.79 142820.8936 199718.1973 171489.2669 148798.6187 181614.0592 1.379823553 1.157343608 1.166160805 0.925567474 1.090492613 0.786397783 1.099684673 0.944251055 0.819312224 1 17.47051636 -3.862928376 0.558959996 0.933672579 2.377638755 0.647034811 0.100834419 6.066536185 0.665627308 0.049116272 7.134884905 0.000137111 3.862928376 1.443966176 NMAPGAVCSPGES(ph)K ddPTM_A459_MK2206_30min_R1 1 NMAPGAVCSPGESK 14 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 NMAPGAVCS(0.447)PGES(0.553)K 81.327 0.03214 4858100 3289.1 3559.4 3032.5 2641.6 3330.6 2854.2 3154 2796.8 2716.8 2880.8 TRUE FALSE 3009.344773 3327.682413 2826.662349 2845.05649 3197.935149 3015.802337 2943.602415 2772.347872 2999.221082 3237.695253 0.929471287 1.027793586 0.873047686 0.878728931 0.987719628 0.931465781 0.909165991 0.856272026 0.926344467 1 11.66075148 -7.176517803 5.143169526 0.91105778 0.939092198 0.000303082 0.054317684 0.78738544 35.26547561 0.02147597 0.016437596 6.66E-08 7.176517803 0.028034419 NMAPGAVCSPGES(ph)K ddPTM_A459_MK2206_30min_R2 3 NMAPGAVCSPGESK 14 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 NMAPGAVCS(0.4)PGES(0.6)K;NMAPGAVCS(0.294)PGES(0.706)K;NMAPGAVCS(0.035)PGES(0.965)K 161.94 0.00027936 41061000 228781 214813 193187 185433 184071 133658 208413 141295 135049 187704 TRUE FALSE 246296.6493 204145.6988 199627.7582 170282.5307 176843.4477 138744.4488 181048.1228 159762.7416 146795.3179 181579.2339 1.356414189 1.124278886 1.099397513 0.937786371 0.9739189 0.764098658 0.997075045 0.879851392 0.808436707 1 17.47023969 -4.476645701 0.670942384 0.886506333 1.821546702 0.774875527 0.076998047 1.99736528 0.510912892 0.032374683 1.562803534 3.34E-05 4.476645701 0.935040369 NMAPSQQS(ph)PVR ddPTM_A459_MK2206_30min_R1 1 NMAPSQQSPVR 11 0 H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;H7C3Q7 H0Y6B5;H7C3Q7 ABI2 Abl interactor 2 1 NMAPSQQS(1)PVR 190.34 1.98E-05 70303000 4638.2 4957.2 4869.9 3858.8 4901.5 3741.6 5141.8 4544.7 4093.9 3729.2 TRUE FALSE 4243.696734 4634.485379 4539.344756 4156.005445 4706.262876 3953.446159 4798.799904 4504.966167 4519.475555 4191.20145 1.012525116 1.10576536 1.083065276 0.991602407 1.122891117 0.94327276 1.144969995 1.074862714 1.078324583 1 12.03314815 NMAPSQQS(ph)PVR ddPTM_A459_MK2206_30min_R2 6 NMAPSQQSPVR 11 0 H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;H7C3Q7 H0Y6B5;H7C3Q7 ABI2 Abl interactor 2 1 NMAPS(0.012)QQS(0.988)PVR;NMAPS(0.01)QQS(0.99)PVR;NMAPS(0.002)QQS(0.998)PVR;NMAPSQQS(1)PVR;NMAPSQQS(1)PVR;NMAPS(0.001)QQS(0.999)PVR 127.78 0.0029026 173413900 159323.2 182855 170275 191107 189394 168284 195402 149311 164271 183393 TRUE FALSE 171521.1067 173774.6866 175951.8835 175492.9468 181957.4399 174688.1655 169745.4827 168826.4604 178558.9946 177408.9014 0.966812292 0.979515037 0.991787233 0.989200347 1.025638728 0.98466404 0.95680364 0.951623391 1.006482726 1 17.43671887 -5.117061807 0.001252035 1.475525259 0.490810931 0.017511228 0.021422676 5119605.627 1154.079946 450260.7698 457428.1976 7.64E-06 5.117061807 -0.984714329 NMGGPYGGGNYGPGGS(ph)GGSGGYGGR ddPTM_A459_MK2206_30min_R1 2 NMGGPYGGGNYGPGGSGGSGGYGGR 25 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 NMGGPYGGGNYGPGGS(0.984)GGS(0.016)GGYGGR;NMGGPYGGGNYGPGGS(0.867)GGS(0.133)GGYGGR 185.3 2.29E-21 5328300 3953.21 4481.56 4185.24 3487.06 3469.7 2725.52 3824.98 3324.69 3057.5 2845.02 TRUE FALSE 3616.96873 4189.809629 3901.15757 3755.633965 3331.494502 2879.836587 3569.822563 3295.622586 3375.338066 3197.482556 1.131192639 1.31034636 1.220071572 1.174559642 1.041911705 0.900657482 1.116447862 1.030692905 1.055623606 1 11.64272077 -6.176784692 3.045562035 1.022850864 1.22626965 0.66741412 0.064558666 0.155425793 2.803129801 0.020182165 0.026685853 6.66E-07 6.176784692 0.203418786 NMGGPYGGGNYGPGGS(ph)GGSGGYGGR ddPTM_A459_MK2206_30min_R2 4 NMGGPYGGGNYGPGGSGGSGGYGGR 25 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 NMGGPYGGGNYGPGGS(0.738)GGS(0.262)GGYGGR;NMGGPYGGGNYGPGGS(0.904)GGS(0.096)GGYGGR;NMGGPYGGGNY(0.002)GPGGS(0.993)GGS(0.005)GGYGGR;NMGGPYGGGNY(0.001)GPGGS(0.502)GGS(0.497)GGY(0.001)GGR 198.54 2.00E-30 94722100 114687.7 131689.3 131084.9 132022.2 139824 115401.2 155287.1 109442.4 111057.8 130668.9 TRUE FALSE 123468.2785 125149.8009 135455.2051 121235.5639 134333.8072 119792.8735 134897.7172 123746.8975 120717.4067 126405.1845 0.976765937 0.990068575 1.071595328 0.959102781 1.062723873 0.947689559 1.067185003 0.978970111 0.955003604 1 16.94769611 -7.967748089 24.99882766 0.973996636 1.010811733 0.105695651 0.043418879 362.2380796 280774.6646 0.021966684 0.010552387 1.08E-08 7.967748089 0.036815098 NMGGPYGGGNYGPGGSGGS(ph)GGYGGR ddPTM_A459_MK2206_30min_R1 4 NMGGPYGGGNYGPGGSGGSGGYGGR 25 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 NMGGPYGGGNYGPGGS(0.244)GGS(0.756)GGYGGR;NMGGPYGGGNYGPGGS(0.347)GGS(0.653)GGYGGR;NMGGPYGGGNYGPGGS(0.007)GGS(0.993)GGYGGR;NMGGPYGGGNYGPGGSGGS(1)GGYGGR 318.43 1.60E-149 67086200 5450.66 5859.72 5666.3 4883.24 5518.42 4767.12 5356.42 5078.53 4883.01 4594.95 TRUE FALSE 4987.052744 5478.251163 5281.687343 5259.347991 5298.609646 5037.030215 4999.102995 5034.128948 5390.616364 5164.207096 0.965695731 1.060811672 1.022748942 1.018423137 1.026025786 0.975373396 0.968029148 0.974811593 1.043842019 1 12.33433114 -6.751104082 24.87858588 0.989313075 1.021283314 0.1607295 0.029377748 306.889173 738725.2043 0.00957744 0.009472376 1.77E-07 6.751104082 0.031970238 NMGGPYGGGNYGPGGSGGS(ph)GGYGGR ddPTM_A459_MK2206_30min_R2 2 NMGGPYGGGNYGPGGSGGSGGYGGR 25 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 NMGGPYGGGNYGPGGS(0.091)GGS(0.909)GGYGGR;NMGGPYGGGNYGPGGS(0.1)GGS(0.9)GGYGGR 198.73 1.95E-30 16138800 59675 73546 70576 78059 66233 66092 87755 57685 58145 74513 TRUE FALSE 64243.76388 69893.81259 72928.96862 71681.33 63632.35963 68607.17737 76232.66309 65224.62756 63202.347 72081.64691 0.891263819 0.969647831 1.011755027 0.994446341 0.882781711 0.951798139 1.057587699 0.904871494 0.876816079 1 16.13734435 NMGGPYGGGNYGPGGSGGSGGYGGR ddPTM_A459_MK2206_30min_R1 2 NMGGPYGGGNYGPGGSGGSGGYGGR 25 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 203.06 8.82E-40 7717800 1173.48 1309.2 1307.3 1110.17 1209.65 1365.25 1378.79 1525.4 1415.31 1014.4 FALSE TRUE 1073.669364 1223.970842 1218.564118 1195.675486 1161.467079 1442.549275 1286.813435 1512.063589 1562.436539 1140.07153 0.94175614 1.07359127 1.068848827 1.048772339 1.018766848 1.265314708 1.128712893 1.32628835 1.370472376 1 10.15490863 -6.758751825 24.99467437 1.232960403 1.035912127 0.451439239 0.102778306 62.71090377 583222.5611 0.033934219 0.032471124 1.74E-07 6.758751825 -0.197048276 NMGLS(ph)PPASSTSTSSTCR ddPTM_A459_MK2206_30min_R1 2 NMGLSPPASSTSTSSTCR 18 0 Q9HC52;C9JM54;C9J6K3 Q9HC52 CBX8 Chromobox protein homolog 8 1 NMGLS(0.204)PPAS(0.137)S(0.137)T(0.043)S(0.074)T(0.074)S(0.128)S(0.102)T(0.102)CR;NMGLS(0.915)PPAS(0.011)S(0.011)T(0.011)S(0.011)T(0.011)S(0.017)S(0.01)T(0.003)CR 83.758 0.01259 6384500 2919 3690.7 3562.9 2660.75 2206.75 2377.48 2414.4 2898.4 3115.2 2962.69 TRUE FALSE 2670.723722 3450.434759 3321.060275 2865.681426 2118.850475 2512.090863 2253.339781 2873.059594 3439.036188 3329.730404 0.802084072 1.036250489 0.997396147 0.860634669 0.636342952 0.75444272 0.676733401 0.862850515 1.032827217 1 11.70118966 -5.963547927 7.081755589 0.803804198 0.951298932 0.124112673 0.131415099 0.328541168 48.14595014 0.038319829 0.056667095 1.09E-06 5.963547927 0.147494734 NMGLS(ph)PPASSTSTSSTCR ddPTM_A459_MK2206_30min_R2 2 NMGLSPPASSTSTSSTCR 18 0 Q9HC52;C9JM54;C9J6K3 Q9HC52 CBX8 Chromobox protein homolog 8 1 NMGLS(0.854)PPAS(0.076)S(0.041)T(0.012)S(0.004)T(0.007)S(0.002)S(0.004)TCR;NMGLS(0.862)PPAS(0.052)S(0.052)T(0.018)S(0.006)T(0.006)S(0.002)S(0.001)TCR 123.42 0.00088798 19984600 76585 89758 80365 98537 90584 94215 110070 75598 77278 91832 TRUE FALSE 82448.40648 85300.74824 83044.32899 90486.2119 87027.21701 97800.41784 95617.67678 85478.91817 83999.50075 88835.52936 0.928101707 0.960209827 0.934809863 1.018581333 0.979644267 1.100915575 1.076344988 0.962215442 0.945561999 1 16.43884917 -5.763812266 24.99716309 1.015371302 0.942957392 0.333886635 0.045653282 76.76307574 808673.6291 0.01396667 0.021884242 1.72E-06 5.763812266 -0.07241391 NMIENSYLS(ph)DNTR ddPTM_A459_MK2206_30min_R2 1 NMIENSYLSDNTR 13 0 Q13017-2;Q13017;A0A0A0MSK6 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 NMIENS(0.005)YLS(0.857)DNT(0.138)R 115.04 0.0045347 0 10412 10608 11517 14426 12085 9102.5 12486 8956.9 7281.9 10386 TRUE FALSE 11209.15073 10081.22215 11900.97103 13247.34965 11610.48218 9448.902016 10846.5732 10127.59758 7915.266499 10047.10567 1.115659683 1.003395652 1.184517355 1.31852397 1.155604665 0.940460101 1.079571924 1.008011453 0.787815592 1 13.29449234 -6.755265717 24.83183195 0.970947531 1.157752313 0.478057049 0.100324529 137.0323346 551173.865 0.03604916 0.035173063 1.76E-07 6.755265717 0.186804783 NMPGLSAATLASLGGT(ph)SSR ddPTM_A459_MK2206_30min_R1 1 NMPGLSAATLASLGGTSSR 19 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3;C9JTC6;Q32MZ4-4 Q32MZ4-2;Q32MZ4-4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NMPGLSAATLAS(0.001)LGGT(0.522)S(0.3)S(0.177)R 103.45 0.010171 13677000 1905 2104.2 1844.8 1380.5 1761.6 1382 1554.9 1641.1 1371 1309.1 TRUE FALSE 1742.969746 1967.216198 1719.580116 1486.826349 1691.431742 1460.247646 1451.175458 1626.752036 1513.520356 1471.281191 1.184661203 1.33707697 1.168763746 1.010565729 1.149631866 0.992500723 0.986334541 1.105670381 1.028709104 1 10.52285729 -5.56872297 4.155701423 1.044579211 1.261012678 0.69225684 0.060266852 0.108156251 3.985801306 0.016107479 0.030283971 2.70E-06 5.56872297 0.216433467 NMPGLSAATLASLGGT(ph)SSR ddPTM_A459_MK2206_30min_R2 1 NMPGLSAATLASLGGTSSR 19 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3;C9JTC6;Q32MZ4-4 Q32MZ4-2;Q32MZ4-4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NMPGLSAATLAS(0.001)LGGT(0.5)S(0.123)S(0.376)R 88.471 0.0073135 26337000 57601 46525 43033 49663 51954 56313 51751 35826 50714 48562 TRUE FALSE 62010.97685 44214.63615 44467.69874 45605.37404 49914.02491 58456.03068 44956.03154 40508.58121 55125.01205 46977.42592 1.32001649 0.941188992 0.94657589 0.970793379 1.062510854 1.244342991 0.956970942 0.862298868 1.173436198 1 15.51968004 -7.948052991 0.009569008 1.85E-05 2.052650453 0.026302559 0.139973895 5651.385442 55.46897797 5945.739656 5944.005684 1.13E-08 7.948052991 2.052631904 NMPGLSAATLASLGGTS(ph)SR ddPTM_A459_MK2206_30min_R1 1 NMPGLSAATLASLGGTSSR 19 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3;C9JTC6;Q32MZ4-4 Q32MZ4-2;Q32MZ4-4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NMPGLSAATLASLGGT(0.052)S(0.628)S(0.32)R 172.77 1.93E-09 70279000 6901.8 5408.4 5779.5 5002.4 6307.3 4981.9 5251.9 4965 4171.7 4097.3 TRUE FALSE 6314.765667 5056.312177 5387.203643 5387.685715 6056.066885 5263.970873 4901.555334 4921.591528 4605.363144 4604.904457 1.37131307 1.098027597 1.169883912 1.169988599 1.315134101 1.143122712 1.064420637 1.068771692 1.000099608 1 12.16895551 -7.20130585 2.613705275 1.032844563 1.212595866 0.583886158 0.075695818 0.226798645 3.044211406 0.033712635 0.023622169 6.29E-08 7.20130585 0.179751303 NMPGLSAATLASLGGTS(ph)SR ddPTM_A459_MK2206_30min_R2 1 NMPGLSAATLASLGGTSSR 19 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3;C9JTC6;Q32MZ4-4 Q32MZ4-2;Q32MZ4-4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NMPGLSAATLASLGGT(0.057)S(0.776)S(0.167)R 103.31 0.0038366 5587000 42191 39265 39998 42094 42209 37063 37378 27989 31497 35708 TRUE FALSE 45421.1754 37315.1572 41331.51336 38654.78555 40551.66258 38473.45844 32470.2237 31647.2584 34236.55213 34542.85088 1.314922603 1.080257021 1.196528726 1.119038659 1.173952396 1.113789321 0.939998375 0.9161739 0.991132789 1 15.07609954 -7.144214469 3.435084386 0.954287183 1.168118588 0.7296407 0.061695399 0.126570084 2.761191552 0.023963422 0.018015196 7.17E-08 7.144214469 0.213831405 NMPGLSAATLASLGGTSS(ph)R ddPTM_A459_MK2206_30min_R1 2 NMPGLSAATLASLGGTSSR 19 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3;C9JTC6;Q32MZ4-4 Q32MZ4-2;Q32MZ4-4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NMPGLS(0.001)AATLASLGGT(0.083)S(0.236)S(0.68)R;NMPGLSAATLAS(0.001)LGGT(0.08)S(0.08)S(0.838)R 114.53 0.0015279 75113200 5976.2 4780.4 5462 3904 5629.7 3839.1 4654.1 4607.6 4306.4 3744.4 TRUE FALSE 5467.892808 4469.195091 5091.254658 4204.686756 5405.457128 4056.466524 4343.633481 4567.316239 4754.065691 4208.284541 1.299316326 1.061999265 1.209817114 0.999145071 1.284479953 0.963924013 1.032162497 1.085315452 1.129692074 1 12.03901654 -6.776057871 24.99996635 1.046922529 1.157513067 0.308012316 0.095289551 339.7699154 581057.2066 0.032044293 0.028381267 1.67E-07 6.776057871 0.110590537 NMPGLSAATLASLGGTSS(ph)R ddPTM_A459_MK2206_30min_R2 1 NMPGLSAATLASLGGTSSR 19 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3;C9JTC6;Q32MZ4-4 Q32MZ4-2;Q32MZ4-4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NMPGLSAATLASLGGT(0.026)S(0.239)S(0.735)R 156.08 3.33E-06 25336000 68390 52645 64074 60144 64234 55130 63328 50248 59248 60213 TRUE FALSE 73625.99098 50030.72585 66210.19518 55230.04281 61711.85041 57228.01078 55012.95753 56815.58613 64401.28394 58248.25474 1.264003382 0.858922316 1.136689768 0.94818365 1.059462651 0.982484557 0.944456753 0.975404094 1.105634568 1 15.8299272 -4.739982692 24.98193065 1.002512403 1.264004382 0.508838287 0.07743615 1331.781678 1550507.544 0.017822433 0.843198903 1.82E-05 4.739982692 0.261491979 NMQNVEHVPLSLDR ddPTM_A459_MK2206_30min_R1 1 NMQNVEHVPLSLDR 14 0 P20618 P20618 PSMB1 Proteasome subunit beta type-1 0 155.14 0.0066166 19374000 7660.7 8049 8390.4 7584.7 7757.8 7557.9 7988.8 7941 6458.6 6535.3 FALSE TRUE 7009.117237 7525.008637 7820.883025 8168.874908 7448.790399 7985.821767 7455.881728 7871.572674 7129.994582 7344.942303 0.954278053 1.024515691 1.064798429 1.112176866 1.014138722 1.087254527 1.015104193 1.071699729 0.970735274 1 12.84253544 -10.22507564 11.68074658 1.000002407 1.039229194 0.039684148 0.047615192 0 0 0.045355659 0.011000363 5.96E-11 10.22507564 0.039226787 NMQNVEHVPLSLDR ddPTM_A459_MK2206_30min_R2 2 NMQNVEHVPLSLDR 14 0 P20618 P20618 PSMB1 Proteasome subunit beta type-1 0 ; 97.2 0.015823 7039000 50219 59553 53562 51011 56241 45895 57919 40447 42403 53568 FALSE TRUE 54063.80525 56595.68462 55347.73035 46843.23812 54032.69575 47641.56639 50314.16573 45733.56178 46091.13629 51820.08055 1.043298364 1.092157403 1.068074958 0.903959192 1.042698027 0.919364962 0.970939551 0.88254517 0.889445478 1 15.66122364 -5.842201215 0.815781568 0.92734648 1.089913237 0.474914611 0.05417633 0.676421217 0.838871527 0.025132664 0.076129532 1.44E-06 5.842201215 0.162566757 NMS(ph)PDEIK ddPTM_A459_MK2206_30min_R2 1 NMSPDEIK 8 0 J3KS14;F5H478;J3KRU5;X6R3T8;J3QLH3;J3QQJ0;Q9UHR5-2;Q9UHR5 J3KS14 SAP30BP SAP30-binding protein 1 NMS(1)PDEIK 86.114 0.034326 9905500 99391 69141 74713 63770 63537 57737 88471 63601 45090 84146 TRUE FALSE 107000.4514 65707.55848 77203.89413 58559.78701 61042.21813 59934.22199 76854.65143 71913.86907 49011.8467 81400.32291 1.314496645 0.807214961 0.948447025 0.719404849 0.749901425 0.736289733 0.944156592 0.88345926 0.60210875 1 16.3127469 -4.760731526 24.97243804 0.817331428 1.314497224 0.613039162 0.117534655 11.15882974 393396.6202 0.028436667 0.165378976 1.73E-05 4.760731526 0.497165795 NMS(ph)PDEIKIPPEPPGR ddPTM_A459_MK2206_30min_R1 1 NMSPDEIKIPPEPPGR 16 1 J3KS14;F5H478;J3KRU5;X6R3T8;J3QLH3;J3QQJ0;Q9UHR5-2;Q9UHR5 J3KS14 SAP30BP SAP30-binding protein 1 NMS(1)PDEIKIPPEPPGR 60.246 0.040463 6049300 1713.8 1963.5 1840.6 1689.3 1766.9 1524.7 1709.6 1559.7 1927.9 1373.7 TRUE FALSE 1568.03231 1835.675793 1715.6652 1819.410179 1696.520632 1611.027196 1595.555703 1546.063707 2128.312104 1543.884327 1.015641058 1.18899827 1.111265378 1.178462756 1.098865117 1.043489573 1.033468425 1.001411622 1.378543759 1 10.59234895 -6.507611926 24.0138507 1.085998603 1.128793372 0.016621567 0.111311355 1853.210771 2915001.953 0.034308635 0.037592785 3.11E-07 6.507611926 0.042794769 NMS(ph)PDEIKIPPEPPGR ddPTM_A459_MK2206_30min_R2 2 NMSPDEIKIPPEPPGR 16 1 J3KS14;F5H478;J3KRU5;X6R3T8;J3QLH3;J3QQJ0;Q9UHR5-2;Q9UHR5 J3KS14 SAP30BP SAP30-binding protein 1 NMS(1)PDEIKIPPEPPGR;NMS(1)PDEIKIPPEPPGR 75.017 0.017329 15817500 102752 126887 119521 121347 125528 100493 136834 115309 89005 129227 TRUE FALSE 110618.7721 120585.9761 123505.7705 111432.5619 120599.14 104317.3315 118867.5314 130380.2822 96746.49402 125010.3336 0.884877025 0.964608066 0.98796449 0.891386806 0.964713368 0.834469668 0.950861645 1.042956038 0.773907974 1 16.93168783 -11.5001531 6.036115684 1.053096125 0.927182215 0.086166394 0.074583986 0.056745742 0.000213645 0.076894829 0.016572697 3.16E-12 11.5001531 -0.12591391 NMSVIAHVDHGK ddPTM_A459_MK2206_30min_R1 1 NMSVIAHVDHGK 12 0 P13639 P13639 EEF2 Elongation factor 2 0 106.54 0.0049958 10599000 4217.8 3983.4 4479.8 3551.9 5223.2 4465.9 4470.8 4230.4 3524.4 3496.3 FALSE TRUE 3859.053961 3724.079936 4175.723657 3825.467953 5015.148884 4718.755399 4172.561089 4193.414059 3890.773992 3929.44804 0.982085505 0.947736145 1.062674354 0.973538246 1.276298562 1.200869779 1.061869516 1.067176361 0.990157893 1 11.94011096 NMSVIAHVDHGK ddPTM_A459_MK2206_30min_R2 2 NMSVIAHVDHGK 12 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 98.337 0.0086727 14631600 137901 197779 171947 217330 236940 210930 245160 162069 188483 202079 FALSE TRUE 148458.8066 187957.5825 177679.6272 199573.4438 227636.5451 218957.089 212970.1975 183251.9748 204876.9106 195485.1788 0.759437659 0.961492752 0.908916104 1.020913427 1.164469585 1.120070024 1.089444217 0.937421322 1.048043191 1 17.5766997 -4.619878346 0.909899375 1.057908397 0.554408915 0.614697809 0.069056512 2.041370564 1.090911072 0.026136154 1.095010569 2.40E-05 4.619878346 -0.503499481 NMTVEQLLT(ph)GSPTSPTVEPEKPTR ddPTM_A459_MK2206_30min_R2 1 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 NMTVEQLLT(0.811)GS(0.173)PT(0.014)S(0.001)PTVEPEKPTR 108.96 6.97E-07 6712600 34171 37631 34194 33170 39553 29427 39548 27144 29597 40522 TRUE FALSE 36787.15803 35762.29926 35334.01089 30459.90489 37999.95048 30546.86511 34355.30009 30691.814 32171.29356 39199.77046 0.938453404 0.912308895 0.901383107 0.77704294 0.969392168 0.779261326 0.876415849 0.782959023 0.82070107 1 15.25855759 -5.539876388 24.86063554 0.850145049 0.920747391 0.120437729 0.073144089 380.9512018 557174.2818 0.018611937 0.032246327 2.88E-06 5.539876388 0.070602341 NMTVEQLLTGS(ph)PTSPTVEPEKPTR ddPTM_A459_MK2206_30min_R2 2 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 NMTVEQLLT(0.008)GS(0.99)PT(0.001)SPTVEPEKPTR;NMTVEQLLT(0.047)GS(0.894)PT(0.053)S(0.006)PT(0.001)VEPEKPTR 105.54 1.16E-06 15099300 34918 40884 41873 41663 44173 35858 42618 30610 32640 51876 TRUE FALSE 37591.34893 38853.76001 43269.02492 38258.99963 42438.54607 37222.60132 37022.20541 34610.8321 35478.9682 50183.29037 0.749080992 0.774236997 0.862219767 0.762385235 0.845670855 0.741732976 0.737739697 0.689688377 0.706987683 1 15.61491945 -6.797120801 24.97274008 0.753492121 0.798868059 0 0.088321299 555.4439809 388740.6969 0.029413279 0.025940889 1.60E-07 6.797120801 0.045375937 NMTVEQLLTGSPT(ph)SPTVEPEKPTR ddPTM_A459_MK2206_30min_R1 2 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 NMTVEQLLTGSPT(0.587)S(0.38)PT(0.033)VEPEKPTR;NMTVEQLLT(0.003)GS(0.003)PT(0.331)S(0.331)PT(0.331)VEPEKPTR 143.27 2.76E-08 24453000 4134.7 3787.4 4383.6 3882.6 3744.7 2933.6 3325.5 3739.7 3418.3 3308.6 TRUE FALSE 3783.022053 3540.839572 4086.053445 4181.638525 3595.540669 3099.697897 3103.661963 3707.004197 3773.644518 3718.494347 1.017353181 0.952224003 1.098846217 1.124551535 0.966934553 0.833589514 0.834655555 0.996909999 1.014831318 1 11.86050286 -6.511150725 24.15265366 0.926224932 1.045092585 0.340497253 0.073385099 434.6297012 895077.8825 0.025546146 0.027406579 3.08E-07 6.511150725 0.118867653 NMTVEQLLTGSPT(ph)SPTVEPEKPTR ddPTM_A459_MK2206_30min_R2 1 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 NMTVEQLLTGSPT(0.895)S(0.098)PT(0.007)VEPEKPTR 155.04 3.60E-11 9458100 34520 36733 34704 37396 35964 27924 36476 24709 27963 31623 TRUE FALSE 37162.87774 34908.89263 35861.01404 34340.62718 34551.87266 28986.66739 31686.65738 27938.55114 30395.17119 30591.1441 1.214824709 1.141143741 1.172267828 1.122567599 1.129473044 0.947550941 1.035811452 0.913288861 0.993593803 1 14.90082644 -6.686344556 4.813287838 0.976202486 1.15749572 0.84567062 0.038121774 0.076563855 3.262699957 0.012609071 0.012427181 2.06E-07 6.686344556 0.181293234 NMTVEQLLTGSPTS(ph)PTVEPEKPTR ddPTM_A459_MK2206_30min_R1 3 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 NMTVEQLLTGSPT(0.057)S(0.942)PT(0.001)VEPEKPTR;NMTVEQLLTGSPT(0.222)S(0.765)PT(0.012)VEPEKPTR;NMTVEQLLTGSPT(0.387)S(0.613)PTVEPEKPTR 198.85 5.41E-31 122360000 11118.1 11390 10485.8 10678.3 8993.6 8832.6 9142.5 9146.9 9038.5 8330.8 TRUE FALSE 10172.44721 10648.50893 9774.053111 11500.74452 8635.365868 9332.694179 8532.620506 9066.929618 9978.08442 9362.882398 1.08646534 1.137310977 1.043914971 1.228333757 0.922297803 0.996775756 0.911324114 0.968390847 1.065706477 1 13.19273702 -6.276081963 24.93791305 0.973498784 1.119235798 0.59323992 0.059359863 530.2565368 903082.5236 0.017788609 0.020254646 5.30E-07 6.276081963 0.145737014 NMTVEQLLTGSPTS(ph)PTVEPEKPTR ddPTM_A459_MK2206_30min_R2 1 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 NMTVEQLLTGSPT(0.249)S(0.749)PT(0.001)VEPEKPTR 120.61 8.23E-08 10376000 18280 19218 18542 17352 18097 15234 19683 12157 14214 16141 TRUE FALSE 19679.53085 18263.66207 19160.18103 15934.28609 17386.42085 15813.74054 17098.59846 13745.96164 15450.30803 15614.32049 1.26035141 1.169673831 1.227090288 1.020491804 1.113491993 1.012771613 1.095058761 0.88034325 0.989496023 1 13.93058217 -5.657797445 0.471859742 0.961935148 1.325636103 0.691924868 0.062296047 1.238958196 0.383725655 0.047466127 0.231809625 2.20E-06 5.657797445 0.363700954 NMTVEQLLTGSPTSPT(ph)VEPEKPTR ddPTM_A459_MK2206_30min_R2 1 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 NMTVEQLLT(0.001)GS(0.003)PT(0.147)S(0.147)PT(0.702)VEPEKPTR 64.589 0.0048005 13083000 10730 11239 10798 8870.6 10091 9259.2 10368 7331.1 10047 10819 TRUE FALSE 11551.49705 10680.8876 11157.99993 8145.843604 9694.776637 9611.565344 9006.669146 8289.299941 10920.8699 10465.97692 1.10371895 1.020534221 1.066121206 0.778316603 0.926313589 0.918362941 0.860566502 0.792023526 1.043463977 1 13.35341936 -5.734036925 24.99744582 0.893933663 1.059165894 0.457436214 0.079778918 183.1267849 167053.0853 0.020647356 0.035751532 1.84E-06 5.734036925 0.165232232 NMVHPNVICDGCNGPVVGTR ddPTM_A459_MK2206_30min_R1 1 NMVHPNVICDGCNGPVVGTR 20 0 Q13501;Q13501-2;E7EMC7;E9PFW8;C9JRJ8;E3W990 Q13501 SQSTM1 Sequestosome-1 0 121.26 0.00034714 5520000 2169 2011.5 1897.4 1912.6 1974.4 2030.7 1755.5 1853.2 1630.8 1224.2 FALSE TRUE 1984.51516 1880.550984 1768.609774 2059.908783 1895.755467 2145.676479 1638.393798 1836.997668 1800.327496 1375.863138 1.442378319 1.366815443 1.285454727 1.497175646 1.377866311 1.559513021 1.190811609 1.335160175 1.308507689 1 10.42612125 -9.153100957 0.547906291 0.981647151 1.406540623 0.613712615 0.093690964 1.545827723 0.745630445 0.159905852 0.043545491 7.03E-10 9.153100957 0.424893473 NNAYLAQS(ph)PQLYK ddPTM_A459_MK2206_30min_R1 1 NNAYLAQSPQLYK 13 0 P14868;P14868-2 P14868 DARS "Aspartate--tRNA ligase, cytoplasmic" 1 NNAY(0.164)LAQS(0.836)PQLYK 116.9 0.0037204 7727500 2156.4 2613.6 2796.6 2156.1 2095.5 2385.9 2167.6 2781.9 2316.2 2178.3 TRUE FALSE 1972.986856 2443.454165 2606.774584 2322.163196 2012.031798 2520.987596 2023.003359 2757.578142 2556.977279 2448.164249 0.805904611 0.998076075 1.064787456 0.948532435 0.821853272 1.029746103 0.826334818 1.126386084 1.044446785 1 11.25748464 -7.775132726 24.99998755 1.064062317 0.936488436 0.300658787 0.089328582 308.2379776 562742.7465 0.048054645 0.023275721 1.68E-08 7.775132726 -0.127573881 NNCPDKTSAAAGSSS(ph)R ddPTM_A459_MK2206_30min_R1 2 NNCPDKTSAAAGSSSR 16 1 A0A087X2H1;Q9ULT8;H0YJP0 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 NNCPDKTSAAAGS(0.007)S(0.279)S(0.714)R;NNCPDKTSAAAGS(0.004)S(0.277)S(0.72)R 59.792 0.041399 9590400 3661.2 3626.5 3371.2 3226.8 2802.9 1829.76 1925.86 2480.99 818.89 617.5 TRUE FALSE 3349.795714 3390.414191 3142.372337 3475.328695 2691.254558 1933.35943 1797.389393 2459.298966 904.0165459 694.0005619 4.826791069 4.885319086 4.527910364 5.007674181 3.877885272 2.785818249 2.589896164 3.543655583 1.302616447 1 9.438793021 -7.302411204 0.412248839 0.946774977 5.315903033 0.859484478 0.52383268 0.430771403 0.173121224 0.589217571 0.650959857 4.98E-08 7.302411204 4.369128056 up NNCPFS(ph)ADENYRPLAK ddPTM_A459_MK2206_30min_R1 3 NNCPFSADENYRPLAK 16 1 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 NNCPFS(1)ADENYRPLAK;NNCPFS(1)ADENYRPLAK;NNCPFS(1)ADENYRPLAK 143.28 0.0018617 22931400 5153.85 6368.5 7037 5408.23 5430.8 4686.9 5304 5359.1 5272.2 5526.98 TRUE FALSE 4715.487994 5953.909492 6559.348046 5824.772812 5214.479736 4952.268228 4950.179838 5312.245954 5820.264057 6211.704009 0.759129538 0.958498583 1.05596597 0.937709331 0.839460433 0.79724794 0.796911738 0.855199466 0.936983483 1 12.60077337 -4.746146462 24.75008575 0.900513299 0.759129104 0.224848211 0.082046859 1405.673168 2274800.855 0.023005029 0.533598104 1.79E-05 4.746146462 -0.141384196 NNCPFS(ph)ADENYRPLAK ddPTM_A459_MK2206_30min_R2 1 NNCPFSADENYRPLAK 16 1 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 NNCPFS(1)ADENYRPLAK 135.26 0.00022706 15498000 34651 43338 48746 45906 44585 32961 51556 40027 35766 43145 TRUE FALSE 37303.9072 41185.89794 50371.16731 42155.33295 42834.36888 34215.35395 44786.63527 45258.66633 38876.86203 41737.18218 0.893781162 0.986791532 1.20686555 1.010018663 1.026287992 0.81978112 1.073063224 1.084372829 0.931468297 1 15.34904558 -4.825299966 4.623357937 1.021263566 0.891045673 0.132660875 0.095234845 0.375513526 14.37841034 0.024469011 0.131253428 1.50E-05 4.825299966 -0.130217893 NNDQPQSANANEPQDSTVNLQS(ph)PLK ddPTM_A459_MK2206_30min_R2 2 NNDQPQSANANEPQDSTVNLQSPLK 25 0 P37275-3;P37275-4;P37275-5;P37275;P37275-2 P37275-3 ZEB1 Zinc finger E-box-binding homeobox 1 1 NNDQPQSANANEPQDSTVNLQS(1)PLK;NNDQPQSANANEPQDSTVNLQS(1)PLK 133.47 3.39E-08 14249400 90664 85702 85332 72969 83707 56105 93429 74431 65062 90141 TRUE FALSE 97605.30555 81446.1633 88176.92629 67007.19928 80420.24259 58240.11509 81161.66007 84159.38726 70720.97515 87199.70655 1.119330665 0.934018777 1.011206686 0.76843377 0.922253592 0.667893476 0.930756115 0.965133836 0.811023087 1 16.41203566 -4.461530721 1.025485984 0.867122791 1.3868579 0.333609179 0.101540929 3.693909958 2.032014907 0.031919753 2.461351047 3.46E-05 4.461530721 0.519735109 NNLSAS(ph)MFDLSMK ddPTM_A459_MK2206_30min_R2 1 NNLSASMFDLSMK 13 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 NNLS(0.006)AS(0.994)MFDLSMK 120.66 0.0029912 2134500 12146 22731 19242 17871 17732 15811 18740 12188 12118 16714 TRUE FALSE 13075.9071 21602.21159 19883.51868 16410.88213 17035.75258 16412.69868 16279.41549 13781.01345 13172.00174 16168.62355 0.808721105 1.336057552 1.229759516 1.014983253 1.053630356 1.015095604 1.00685228 0.852330652 0.814664384 1 13.98090925 -7.069040354 1.017947278 0.881866361 1.123081383 0.261065162 0.138634555 0.655333673 1.380450629 0.091633012 0.061741266 8.53E-08 7.069040354 0.241215022 NNMT(ph)ASMFDLSMKDK ddPTM_A459_MK2206_30min_R1 2 NNMTASMFDLSMKDK 15 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q7L804;Q7L804-2 Q6WKZ4;Q7L804 RAB11FIP1;RAB11FIP2 Rab11 family-interacting protein 1;Rab11 family-interacting protein 2 1 NNMT(0.667)AS(0.333)MFDLSMKDK;NNMT(0.999)AS(0.001)MFDLSMKDK 125.47 0.0016983 42498000 6479.9 7297.4 6757.4 8880.4 7009.7 5194.5 6072.5 8620.6 5314.5 3741 TRUE FALSE 5928.750478 6822.337934 6298.726515 9564.369947 6730.488806 5488.608101 5667.414605 8545.231003 5866.961293 4204.463323 1.41010874 1.6226418 1.498104759 2.274813505 1.600796175 1.305424184 1.347951967 2.032418967 1.395412647 1 12.03770594 -6.524969173 24.94113176 1.47390078 1.71333515 0.137043944 0.323834212 159.2446689 1899928.264 0.108167886 0.108853677 2.99E-07 6.524969173 0.23943437 NNMTAS(ph)MFDLSMK ddPTM_A459_MK2206_30min_R1 1 NNMTASMFDLSMK 13 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q7L804;Q7L804-2 Q6WKZ4;Q7L804 RAB11FIP1;RAB11FIP2 Rab11 family-interacting protein 1;Rab11 family-interacting protein 2 1 NNMTAS(0.98)MFDLS(0.02)MK 103.66 0.031525 5776900 2707.8 3285.4 3151.3 3015.7 2886.8 2378.5 2980.9 2786.3 3272.9 2892.2 TRUE FALSE 2477.487391 3071.519863 2937.398536 3247.969737 2771.812643 2513.168615 2782.0496 2761.939673 3613.129667 3250.507571 0.762184778 0.944935459 0.903673802 0.99921925 0.852732253 0.773161902 0.855881594 0.84969489 1.111558607 1 11.6664493 -8.255006032 24.99237356 1.055779309 0.871801864 0.522180922 0.071884472 380.5639489 1478436.424 0.053128452 0.018981978 5.56E-09 8.255006032 -0.183977445 NNMTAS(ph)MFDLSMK ddPTM_A459_MK2206_30min_R2 1 NNMTASMFDLSMK 13 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q7L804;Q7L804-2 Q6WKZ4;Q7L804 RAB11FIP1;RAB11FIP2 Rab11 family-interacting protein 1;Rab11 family-interacting protein 2 1 NNMT(0.337)AS(0.618)MFDLS(0.044)MK 143.97 0.00069401 7511300 76818 80709 70486 51628 62460 55943 66270 45346 52523 58286 TRUE FALSE 82699.24514 76701.10842 72835.96806 47409.82725 60007.50656 58071.95007 57568.6694 51272.8779 57091.3556 56384.13259 1.466711313 1.360331442 1.291781299 0.840836332 1.064262299 1.029934263 1.021008336 0.909349413 1.012542944 1 15.7830016 -5.614036715 5.042524138 0.986690867 1.394360623 0.879521277 0.067001799 0.063860789 2.696439393 0.018626408 0.033111236 2.43E-06 5.614036715 0.407669756 NNMTAS(ph)MFDLSMKDK ddPTM_A459_MK2206_30min_R2 1 NNMTASMFDLSMKDK 15 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q7L804;Q7L804-2 Q6WKZ4;Q7L804 RAB11FIP1;RAB11FIP2 Rab11 family-interacting protein 1;Rab11 family-interacting protein 2 1 NNMT(0.047)AS(0.946)MFDLS(0.007)MKDK 77.357 0.019267 6107100 12222 27350 29530 19031 38742 24080 24025 16798 30992 20369 TRUE FALSE 13157.72572 25991.83877 30514.51546 17476.10642 37220.79442 24996.38127 20870.48864 18993.55628 33687.62814 19704.3612 0.66775703 1.319090658 1.548617342 0.886915655 1.888962248 1.268571004 1.059181185 0.963926518 1.709653401 1 14.26622736 -4.760302458 24.99202682 1.298466535 0.667756276 0.258926129 0.317692505 39.27499977 862970.8977 0.076301506 0.45669791 1.74E-05 4.760302458 -0.63071026 NNPS(ph)PPPDSDLER ddPTM_A459_MK2206_30min_R2 1 NNPSPPPDSDLER 13 0 E7ESD5;E9PLN6;F2Z2Y1;O95677-3;O95677-5;O95677-2;O95677-4;O95677 E7ESD5 EYA4 Eyes absent homolog;Eyes absent homolog 4 1 NNPS(0.999)PPPDS(0.001)DLER 168.45 0.00027951 15782000 42797 47338 39128 46020 44335 34107 50636 41613 28904 43768 TRUE FALSE 46073.57123 44987.26376 40432.50799 42260.01879 42594.18513 35404.96578 43987.43238 47051.96198 31418.01767 42339.85374 1.088184468 1.062527614 0.954951527 0.998114425 1.006006903 0.836208977 1.038913187 1.111292501 0.742043604 1 15.36972867 -5.187031531 4.119318386 0.966027329 1.082160645 0.176513458 0.098745807 0.398870757 12.8679515 0.024852886 0.072893799 6.50E-06 5.187031531 0.116133316 NNQITNNQR ddPTM_A459_MK2206_30min_R2 1 NNQITNNQR 9 0 P00558-2;P00558 P00558-2 PGK1 Phosphoglycerate kinase 1 0 168.26 0.010844 7047800 1259.3 2189.2 1054.1 2766 2252.9 893.33 2312.6 1079.4 1204.4 2544.5 FALSE TRUE 1355.712976 2080.487511 1089.243168 2540.008952 2164.439826 927.3262991 2008.952842 1220.481286 1309.156535 2461.473173 0.550773005 0.84522047 0.442516774 1.031906006 0.879327002 0.376736301 0.816158739 0.495833674 0.531858949 1 11.2653063 -6.704661063 24.99999732 0.623347995 0.753825882 0.048633278 0.224514369 238.4739913 105000.8417 0.071592264 0.071592227 1.97E-07 6.704661063 0.130477887 NNS(ph)FTAPSTVGK ddPTM_A459_MK2206_30min_R1 2 NNSFTAPSTVGK 12 0 O95453;O95453-3;O95453-2;A0A494C0W0;A0A494C0K5;A0A494C0Q6;O95453-4 O95453 PARN Poly(A)-specific ribonuclease PARN 1 NNS(0.991)FT(0.009)APSTVGK;NNS(0.99)FT(0.01)APSTVGK 182.72 0.00010388 14287500 8005.4 6599 9902 7076.8 6350.9 5746.9 6343.5 7117 6918.2 7051.6 TRUE FALSE 7324.498692 6169.403901 9229.879829 7621.856362 6097.930205 6072.284512 5920.336689 7054.776819 7637.371647 7925.205445 0.924203006 0.778453498 1.164623415 0.961723505 0.769434969 0.766199003 0.747026273 0.890169582 0.963681219 1 12.95223262 -4.437619335 21.25742335 0.886051989 3.40126211 0.0021854 0.126974592 2938.92551 744143.5408 0.032629212 5538.531394 3.65E-05 4.437619335 2.515210121 NNS(ph)FTAPSTVGK ddPTM_A459_MK2206_30min_R2 3 NNSFTAPSTVGK 12 0 O95453;O95453-3;O95453-2;A0A494C0W0;A0A494C0K5;A0A494C0Q6;O95453-4 O95453 PARN Poly(A)-specific ribonuclease PARN 1 NNS(0.757)FT(0.243)APSTVGK;NNS(0.751)FT(0.249)APSTVGK;NNS(0.817)FT(0.183)APSTVGK 182.72 0.00010424 24823300 135969 117111 130420 125284 140499 93615 149243 113954 89742 169215 TRUE FALSE 146378.8912 111295.438 134768.1377 115047.8964 134982.3033 97177.58442 129647.2148 128848.1791 97547.59694 163693.5284 0.894225279 0.679901271 0.823295454 0.702824953 0.824603786 0.593655628 0.792011853 0.787130562 0.595916026 1 17.32063776 -10.53321474 4.275926181 1.000014505 0.743650528 0.396796889 0.094791075 124128026.8 453009974.2 33843.48043 0.021950258 2.93E-11 10.53321474 -0.256363977 NNS(ph)GEEFDCAFR ddPTM_A459_MK2206_30min_R2 1 NNSGEEFDCAFR 12 0 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 NNS(1)GEEFDCAFR 88.78 0.031017 0 8900.2 9416.5 8631.5 11459 9177.5 8641.6 10179 8096 7014.5 10294 TRUE FALSE 9581.606155 8948.890303 8919.269902 10522.76304 8817.145237 8970.462143 8842.485073 9154.174998 7624.608531 9958.107623 0.962191464 0.898653704 0.895679203 1.056703085 0.885423774 0.900819963 0.887968418 0.919268534 0.76566842 1 13.28165589 NNS(ph)NTCNIENELEDSRK ddPTM_A459_MK2206_30min_R1 2 NNSNTCNIENELEDSRK 17 1 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 NNS(0.875)NT(0.125)CNIENELEDSRK;NNS(0.994)NT(0.006)CNIENELEDSRK 188.19 3.07E-08 18913000 2472.57 2565.44 3134.23 2762.92 1858.83 1745.71 2155.24 2299.92 2746.54 2385.7 TRUE FALSE 2262.264938 2398.42939 2921.4872 2975.720577 1784.788865 1844.550592 2011.467872 2279.812042 3032.052662 2681.258527 0.843732492 0.894516275 1.089595491 1.109822327 0.665653404 0.687942089 0.750195422 0.850276845 1.130831895 1 11.38869462 -6.253119071 24.98215952 0.827155664 0.985507956 0.156775668 0.151222802 1110.308423 3333757.2 0.047948544 0.060827882 5.58E-07 6.253119071 0.158352292 NNS(ph)PPTVGAFGHTR ddPTM_A459_MK2206_30min_R1 2 NNSPPTVGAFGHTR 14 0 Q86XL3;F5H1D4;Q86XL3-3 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 NNS(1)PPTVGAFGHTR;NNS(1)PPTVGAFGHTR 145.99 0.00033499 23910000 4026.7 4293.4 4090.6 4020.3 4214.6 3731 4144.7 3798.7 3806 3293.5 TRUE FALSE 3684.20802 4013.89888 3812.941469 4329.944203 4046.723557 3942.245996 3868.214625 3765.488366 4201.64732 3701.523645 0.995322028 1.084390987 1.03010053 1.169773482 1.09325887 1.065033314 1.045033072 1.017280647 1.135112922 1 11.85390353 -10.01209923 14.86779155 1.000005902 1.070905543 0.149356485 0.050533553 0 0 0.048646905 0.011798608 9.73E-11 10.01209923 0.070899641 NNS(ph)PPTVGAFGHTR ddPTM_A459_MK2206_30min_R2 4 NNSPPTVGAFGHTR 14 0 Q86XL3;F5H1D4;Q86XL3-3 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 NNS(0.997)PPT(0.003)VGAFGHTR;NNS(1)PPTVGAFGHTR;NNS(1)PPTVGAFGHTR;NNS(1)PPTVGAFGHTR 119.5 0.0014577 26805500 97091 106756 96458 104207 100673 104044 147109 93549 107913 100750 TRUE FALSE 104524.3616 101454.6523 99673.86158 95692.95476 96720.07218 108003.4673 127793.4116 105776.1755 117299.0777 97462.53575 1.072456825 1.040960524 1.022688983 0.981843475 0.992382062 1.108153677 1.311205486 1.085300877 1.203529918 1 16.57256014 -6.94772478 5.721978499 1.164190929 1.022349232 0.36921937 0.078655227 0.183866196 13.14522944 0.02701804 0.023591348 1.13E-07 6.94772478 -0.141841697 NNS(ph)RVSPVPLSGAAAGTEQK ddPTM_A459_MK2206_30min_R2 1 NNSRVSPVPLSGAAAGTEQK 20 1 Q96JM2;Q96JM2-3;H3BLX4;Q96JM2-2;H0Y6H9 Q96JM2 ZNF462 Zinc finger protein 462 1 NNS(0.785)RVS(0.215)PVPLSGAAAGTEQK 101.3 0.00038965 9583100 18318 26497 24298 22709 25552 22108 25293 20878 26794 30813 TRUE FALSE 19720.44016 25181.19751 25108.08319 20853.60206 24548.70009 22949.33543 21971.99872 23606.82628 29124.49369 29807.57433 0.661591579 0.844791905 0.842339028 0.699607483 0.823572553 0.769916236 0.737128036 0.791974081 0.977083655 1 14.86339136 -8.265115866 4.050558449 0.998169724 0.77303487 0.706133803 0.056252707 0.111751676 4.229691617 0.047733218 0.014043632 5.43E-09 8.265115866 -0.225134854 NNS(ph)VSGLSVK ddPTM_A459_MK2206_30min_R1 1 NNSVSGLSVK 10 0 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 NNS(0.999)VSGLSVK 98.407 0.019595 4976400 4653.9 4836 5116.1 4018.3 3436.5 2583.7 2930.9 3287.7 3622.4 3317.6 TRUE FALSE 4258.061366 4521.175521 4768.833386 4327.790162 3299.616928 2729.986861 2735.385009 3258.955986 3998.961443 3728.609335 1.141997186 1.212563483 1.278984457 1.160698205 0.884945735 0.732172941 0.733620705 0.874040612 1.072507491 1 11.86442193 -6.238496212 4.060690674 0.859232978 1.211384574 0.689351409 0.103556975 0.124128676 4.778023481 0.03381585 0.04247056 5.77E-07 6.238496212 0.352151595 NNS(ph)VSGLSVK ddPTM_A459_MK2206_30min_R2 1 NNSVSGLSVK 10 0 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 NNS(0.993)VS(0.005)GLS(0.002)VK 106.54 0.011837 4957400 31421 26848 24655 19101 20153 14901 18057 12313 11394 14229 TRUE FALSE 33826.61592 25514.76736 25476.98539 17540.3872 19361.69196 15468.068 15686.09421 13922.35138 12385.02952 13764.7089 2.457488653 1.853636539 1.850891696 1.274301355 1.406618339 1.123748284 1.139587791 1.011452656 0.899766905 1 13.74868648 -2.196756325 0.330525858 0.914278183 11.14715268 0.94446102 0.111749866 7.244113712 0.156254166 0.095943397 41.88707223 0.006356875 2.196756325 10.2328745 up NNS(ph)YTCYTAAICGLPVHATFR ddPTM_A459_MK2206_30min_R2 1 NNSYTCYTAAICGLPVHATFR 21 0 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 1 NNS(0.594)Y(0.06)T(0.346)CYTAAICGLPVHATFR 91.335 0.0019085 0 2968.1 3680.4 3064.5 4551.7 5312.6 6059.7 7299.7 4980.7 5873.1 4424.5 TRUE FALSE 3195.340018 3497.636688 3166.6689 4179.81155 5104.00063 6290.30613 6341.240621 5631.694591 6383.931622 4280.128927 0.746552282 0.817180218 0.739853625 0.976562066 1.19248759 1.469653423 1.481553647 1.315776858 1.491527879 1 12.06343854 -6.227174143 1.935684682 1.377716221 0.772674282 0.770697427 0.139209989 0.142632286 1.050701936 0.045083759 0.060499398 5.93E-07 6.227174143 -0.605041939 NNSFT(ph)APSTVGK ddPTM_A459_MK2206_30min_R2 1 NNSFTAPSTVGK 12 0 O95453;O95453-3;O95453-2;A0A494C0W0;A0A494C0K5;A0A494C0Q6;O95453-4 O95453 PARN Poly(A)-specific ribonuclease PARN 1 NNS(0.018)FT(0.982)APSTVGK 204.17 8.51E-05 9249000 54764 50605 55111 53786 46700 35035 55828 46059 31830 62260 TRUE FALSE 58956.77395 48092.02929 56948.37323 49391.51175 44866.32335 36368.28148 48497.71654 52079.06944 34598.51586 60228.4613 0.978885608 0.798493407 0.945539235 0.820069294 0.744935573 0.603838795 0.805229214 0.864692013 0.574454587 1 15.87815778 -6.004066956 4.06380192 0.753835197 0.896492265 0.207228038 0.122188812 0.323076638 12.42830754 0.034658379 0.049665065 9.91E-07 6.004066956 0.142657068 NNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPS(ph)PHTLR ddPTM_A459_MK2206_30min_R2 4 NNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLR 38 0 Q68EM7-5;Q68EM7-3;Q68EM7-6;Q68EM7;Q68EM7-7;Q68EM7-2 Q68EM7-5 ARHGAP17 Rho GTPase-activating protein 17 1 NNSQIASGQNQPQAAAGS(0.033)HQLS(0.093)MGQPHNAAGPS(0.675)PHT(0.198)LR;NNSQIAS(0.002)GQNQPQAAAGS(0.097)HQLS(0.121)MGQPHNAAGPS(0.724)PHT(0.056)LR;NNSQIASGQNQPQAAAGS(0.273)HQLS(0.273)MGQPHNAAGPS(0.387)PHT(0.066)LR;NNSQIASGQNQPQAAAGS(0.001)HQLS(0.004)MGQPHNAAGPS(0.545)PHT(0.45)LR 76.632 7.68E-07 49951600 53652.7 91149.1 83919.2 111321.4 106891.1 93760.6 111840 73757.8 91018.7 91260.2 TRUE FALSE 57760.39196 86622.76824 86717.02424 102226.0855 102694.0183 97328.72533 97155.27366 83398.19771 98935.342 88282.38715 0.654268579 0.981201019 0.982268684 1.157944283 1.163244693 1.102470475 1.100505738 0.944675381 1.120669085 1 16.42983802 -4.385281473 1.348377745 1.082009098 9.55E-18 0.76734028 0.06918317 1.593393828 1.2685559 0.020743518 3.058384874 4.12E-05 4.385281473 -1.082009098 NNSRVS(ph)PVPLSGAAAGTEQK ddPTM_A459_MK2206_30min_R2 1 NNSRVSPVPLSGAAAGTEQK 20 1 Q96JM2;Q96JM2-3;H3BLX4;Q96JM2-2;H0Y6H9 Q96JM2 ZNF462 Zinc finger protein 462 1 NNS(0.125)RVS(0.875)PVPLSGAAAGTEQK 53.188 0.029689 13001000 19892 35535 31441 23691 33022 28388 27989 21186 24797 31151 TRUE FALSE 21414.94681 33770.38357 32489.22725 21755.36952 31725.39036 29468.32523 24314.01068 23955.08294 26953.79824 30134.54542 0.710644429 1.120653493 1.078138953 0.721941188 1.052791403 0.977891812 0.806848431 0.794937591 0.894448476 1 14.87913068 -7.25196522 24.44189601 0.85697009 0.952714041 0.048740443 0.13952085 1237.02556 3191344.398 0.053044984 0.040509889 5.60E-08 7.25196522 0.095743951 NNTAAETEDDES(ph)DGEDRGGGTSGVR ddPTM_A459_MK2206_30min_R1 1 NNTAAETEDDESDGEDRGGGTSGVR 25 1 A0A590UJS4;Q6KC79-2 A0A590UJS4 NIPBL Nipped-B-like protein 1 NNTAAETEDDES(0.999)DGEDRGGGT(0.001)SGVR 111.89 8.36E-08 6571300 517.1 410.5 532.35 498.11 385.12 321.22 467.68 332.43 364.28 311.59 TRUE FALSE 473.1179296 383.7763754 496.2155652 536.4745185 369.7798549 339.4071988 436.4819205 329.5235996 402.1482096 350.1921216 1.351023911 1.095902368 1.41698095 1.531943426 1.055934249 0.96920284 1.246407025 0.940979477 1.148364526 1 8.452002817 -6.291954446 24.38781035 1.061962624 1.335745375 0.537772512 0.13094008 425.1528847 339783.3275 0.041348009 0.04689062 5.11E-07 6.291954446 0.273782751 NNTAAETEDDES(ph)DGEDRGGGTSGVR ddPTM_A459_MK2206_30min_R2 1 NNTAAETEDDESDGEDRGGGTSGVR 25 1 A0A590UJS4;Q6KC79-2 A0A590UJS4 NIPBL Nipped-B-like protein 1 NNTAAET(0.002)EDDES(0.743)DGEDRGGGT(0.127)S(0.127)GVR 57.896 0.0054926 13146000 2998.6 2784.9 2366.9 3127.1 3366.1 3079.9 2977 1143.9 2563.6 3224.1 TRUE FALSE 3228.175122 2646.605916 2445.811265 2871.605927 3233.930001 3197.107753 2586.116324 1293.411658 2786.577294 3118.897881 1.035037133 0.848570879 0.784190877 0.92071175 1.036882298 1.025076125 0.829176338 0.414701509 0.893449353 1 11.6068206 -7.524220657 24.99996086 0.716833058 0.933167326 0.169509121 0.161786114 61.38837998 1143589.805 0.073487892 0.042852533 2.99E-08 7.524220657 0.216334267 NNTVIDELPFKS(ph)PITK ddPTM_A459_MK2206_30min_R1 1 NNTVIDELPFKSPITK 16 1 Q9UQC2;Q9UQC2-2 Q9UQC2 GAB2 GRB2-associated-binding protein 2 1 NNT(0.001)VIDELPFKS(0.962)PIT(0.037)K 65.716 0.030242 13737000 3093.1 4157.8 3750.4 2363.3 1955.6 1462.3 1452.7 1450.5 1467.5 1313.8 TRUE FALSE 2830.015602 3887.126464 3495.833297 2545.321775 1877.704311 1545.094162 1355.793034 1437.818431 1620.051877 1476.563463 1.916623074 2.63254954 2.367546933 1.723814682 1.271671932 1.046412295 0.91820844 0.973759996 1.097177275 1 10.52802765 -6.1106077 1.80944456 1.00611609 2.35075094 0.909111249 0.179480557 0.09153085 0.594786258 0.060008115 0.089361724 7.75E-07 6.1106077 1.34463485 NNVGERDDDVPADMVAEESGPGAQNS(ph)PYQLR ddPTM_A459_MK2206_30min_R2 2 NNVGERDDDVPADMVAEESGPGAQNSPYQLR 31 1 Q86XK2-4;Q86XK2;Q86XK2-5 Q86XK2-4 FBXO11 F-box only protein 11 1 NNVGERDDDVPADMVAEESGPGAQNS(0.992)PY(0.008)QLR;NNVGERDDDVPADMVAEES(0.02)GPGAQNS(0.974)PY(0.005)QLR 125.96 2.64E-18 9011600 25761 34624 31655 36098 37784 33809 36759 30683 32352 34643 TRUE FALSE 27733.28197 32904.62251 32710.3619 33148.67793 36300.41031 35095.62519 31932.49914 34693.37345 35165.91848 33512.60175 0.827547863 0.98185819 0.976061547 0.989140687 1.083186874 1.047236662 0.952850494 1.035233663 1.04933418 1 15.03241607 -3.894850012 1.02265737 1.022996215 7.60E-13 0.713754455 0.03608043 5.365604925 1.180783449 0.011892184 9.251622345 0.000127394 3.894850012 -1.022996215 NNYYSSRFS(ph)PDSQYIDNR ddPTM_A459_MK2206_30min_R1 2 NNYYSSRFSPDSQYIDNR 18 1 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 NNYYS(0.001)SRFS(0.93)PDS(0.054)QY(0.015)IDNR;NNYYS(0.06)S(0.183)RFS(0.562)PDS(0.195)QY(0.001)IDNR 116.61 0.007574 17648000 2340.61 3175.8 2930.69 2831.96 2417.66 2299.75 2038.99 2627.17 2140.28 1727.24 TRUE FALSE 2141.528828 2969.054843 2731.762928 3050.07805 2321.359483 2429.959858 1902.972697 2604.20093 2362.769765 1941.223531 1.103185076 1.529476021 1.407237695 1.571214237 1.195822864 1.251767155 0.980295503 1.341525532 1.217154917 1 10.92275054 -6.386504681 7.495643112 1.17453791 1.411714741 0.362788006 0.154425666 0.299521213 16.9698453 0.046796325 0.053045603 4.11E-07 6.386504681 0.23717683 NNYYSSRFS(ph)PDSQYIDNR ddPTM_A459_MK2206_30min_R2 4 NNYYSSRFSPDSQYIDNR 18 1 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 NNYY(0.001)S(0.003)S(0.002)RFS(0.779)PDS(0.174)QY(0.04)IDNR;NNYYS(0.001)SRFS(0.921)PDS(0.071)QY(0.007)IDNR;NNY(0.009)Y(0.093)S(0.093)S(0.182)RFS(0.588)PDS(0.028)QY(0.006)IDNR;NNY(0.002)Y(0.007)S(0.008)S(0.008)RFS(0.857)PDS(0.089)QY(0.029)IDNR 89.44 0.003909 43576400 41537.9 83305 59667 77298.1 98743 82249.8 92521.8 67458 80407.3 68114.6 TRUE FALSE 44718.07356 79168.19484 61656.268 70982.59797 94865.85368 85379.87377 80373.57652 76274.99222 87400.98161 65892.02618 0.678656829 1.201483691 0.93571668 1.077256264 1.439716748 1.295754262 1.219776977 1.157575455 1.326427288 1 16.00781627 -4.240077283 0.806110058 1.2310153 2.62E-12 0.481789027 0.150476098 4.868868734 1.316886567 0.055308232 6.581159313 5.75E-05 4.240077283 -1.2310153 NNYYSSRFSPDS(ph)QYIDNR ddPTM_A459_MK2206_30min_R2 1 NNYYSSRFSPDSQYIDNR 18 1 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 NNY(0.002)Y(0.01)S(0.012)S(0.012)RFS(0.315)PDS(0.537)QY(0.113)IDNR 71.354 0.012045 13661000 16593 28304 23351 30811 48654 26723 33113 21947 41437 30048 TRUE FALSE 17863.37284 26898.46452 24129.51069 28293.64274 46743.59949 27739.96249 28765.22332 24815.54826 45041.11536 29067.53622 0.614547195 0.925378206 0.830118883 0.973376021 1.608103251 0.954327958 0.989599638 0.853720386 1.549533301 1 14.82712117 -6.003164316 17.26460072 1.147498534 0.819909941 0.313343459 0.244437854 3.270356668 17862.03684 0.069891548 0.100103427 9.93E-07 6.003164316 -0.327588593 NPCEVQPDS(ph)LTNNACVR ddPTM_A459_MK2206_30min_R2 1 NPCEVQPDSLTNNACVR 17 0 Q5W0Q7-2;Q5W0Q7 Q5W0Q7-2 USPL1 SUMO-specific isopeptidase USPL1 1 NPCEVQPDS(0.5)LT(0.5)NNACVR 65.528 0.043236 33676000 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 NPCHNGGLCEEIS(ph)QEVR ddPTM_A459_MK2206_30min_R2 1 NPCHNGGLCEEISQEVR 17 0 H0YKS8;Q08431-3;Q08431 H0YKS8 MFGE8 Lactadherin;Lactadherin short form;Medin 1 NPCHNGGLCEEIS(1)QEVR 104.45 0.0018357 3080800 12904 13790 16531 18280 13587 17698 17930 12965 13071 12792 TRUE FALSE 13891.94016 13105.20865 17082.13529 16786.46553 13053.50611 18371.50979 15575.76946 14659.57002 14207.89195 12374.59809 1.122617483 1.059041155 1.380419402 1.35652612 1.054863036 1.484614665 1.258688917 1.184650193 1.14814977 1 13.59509405 -8.542090921 1.577683788 1.00282996 1.246852655 0.238136148 0.132690718 0.635098993 3.511080791 0.129414558 0.037734297 2.87E-09 8.542090921 0.244022695 NPDDITNEEYGEFYK ddPTM_A459_MK2206_30min_R1 4 NPDDITNEEYGEFYK 15 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;;; 228.17 1.32E-12 65004000 11985.9 11847.1 12690.2 11970.8 12877 11911.1 11790.9 12973.5 10262.6 10782.7 FALSE TRUE 10966.43626 11075.85164 11828.82458 12892.79309 12364.08182 12585.49619 11004.35057 12860.07406 11329.434 12118.54228 0.904930313 0.91395907 0.976093024 1.063889764 1.020261475 1.038532185 0.908058933 1.061189849 0.934884224 1 13.56492855 -5.340583051 3.593644652 1.005290732 0.907726321 0.378860183 0.047452571 0.226503646 5.566506314 0.012357073 0.029697379 4.56E-06 5.340583051 -0.097564412 NPDDITNEEYGEFYK ddPTM_A459_MK2206_30min_R2 2 NPDDITNEEYGEFYK 15 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 165.78 0.0011633 28965000 127324 143149 135026 141855 155730 146139 151744 121078 118916 145762 FALSE TRUE 137072.0233 136040.4288 139527.6994 130264.9927 149615.2577 151700.422 131819.8305 136903.3103 129259.0987 141005.7979 0.972102037 0.964786065 0.989517463 0.923827209 1.061057488 1.07584528 0.934853974 0.97090554 0.916693503 1 17.10539496 NPDDITQEEYGEFYK ddPTM_A459_MK2206_30min_R1 2 NPDDITQEEYGEFYK 15 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 239.38 6.69E-19 30578000 4267.6 4818.8 4682 5077.6 5250.7 4801.8 4655.2 4874.7 4195.2 4142 FALSE TRUE 3904.61821 4505.095244 4364.198885 5468.677632 5041.5535 5073.673766 4344.660102 4832.081012 4631.306053 4655.142231 0.838775276 0.967767475 0.937500654 1.17476059 1.083007404 1.089907357 0.933303407 1.038009318 0.994879603 1 12.18460953 -4.939302673 1.546425334 1.04141875 0.809339062 0.437951712 0.067903566 0.776564951 2.222943041 0.020416561 0.252313022 1.15E-05 4.939302673 -0.232079688 NPDDITQEEYGEFYK ddPTM_A459_MK2206_30min_R2 4 NPDDITQEEYGEFYK 15 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;;; 209.41 1.95E-05 46546400 142533 157226 148556 162673 150802 139400 180124 132996 141178 151186 FALSE TRUE 153445.4361 149418.3855 153508.7829 149382.0955 144880.7558 144704.9647 156473.5024 150379.0338 153457.4072 146252.8132 1.049179381 1.021644522 1.049612514 1.021396391 0.990618591 0.989416624 1.06988371 1.028212932 1.049261234 1 17.15810485 -10.21409417 4.558767601 0.999999972 1.028778323 0.115632866 0.024638753 3359135.28 1881572.788 0.925861369 0.006245915 6.11E-11 10.21409417 0.028778351 NPDVDTSFLPDRDREEEENR ddPTM_A459_MK2206_30min_R2 1 NPDVDTSFLPDRDREEEENR 20 2 B0S8I6;Q9Y247;Q14320 B0S8I6 FAM50A;FAM50B Protein FAM50B;Protein FAM50A 0 62.556 0.014551 14262000 30637 33508 28366 34741 35873 24471 34862 28388 23733 27460 FALSE TRUE 32982.59228 31844.04145 29311.70828 31902.54917 34464.44577 25402.26105 30284.57752 32098.40907 25797.25344 26563.98245 1.241628296 1.198767598 1.103438023 1.200970119 1.297412609 0.956267047 1.140061645 1.208343257 0.971136519 1 14.69718383 -6.755564875 24.99957229 1.073489395 1.201656967 0.438874961 0.085239663 167.8397996 714259.5184 0.028967532 0.028226527 1.76E-07 6.755564875 0.128167572 NPDVDTSFLPDRDREEEENRLR ddPTM_A459_MK2206_30min_R2 1 NPDVDTSFLPDRDREEEENRLR 22 3 B0S8I6;Q9Y247;Q14320 B0S8I6 FAM50A;FAM50B Protein FAM50B;Protein FAM50A 0 45.069 0.040638 7755700 3787.4 8845.6 4683.9 7694.7 7716.5 7322.9 6781.8 2601.3 8958.2 2586.4 FALSE TRUE 4077.366256 8406.340367 4840.058888 7066.018396 7413.511438 7601.578091 5891.341514 2941.298842 9737.368043 2502.00598 1.629638893 3.359840238 1.934471351 2.82414129 2.963027066 3.038193414 2.354647255 1.175576264 3.891824449 1 11.28886952 -10.23513778 10.11672435 0.999947913 2.563646398 0.26808462 0.780332592 0 0 0.711681729 0.172608173 5.82E-11 10.23513778 1.563698486 NPEAALS(ph)PTFR ddPTM_A459_MK2206_30min_R1 1 NPEAALSPTFR 11 0 B4E349;F5H6D8;B4DTN4;Q86U44 B4E349 METTL3 N6-adenosine-methyltransferase 70 kDa subunit 1 NPEAALS(0.966)PT(0.034)FR 115.24 0.0062346 37226000 2268.3 2518.9 2938.9 2369.6 2696.2 1909 2662.5 2166.6 2279.8 1871.7 TRUE FALSE 2075.369174 2354.919152 2739.415656 2552.107003 2588.804645 2017.08593 2484.889483 2147.657645 2516.793368 2103.580327 0.986588982 1.119481449 1.302263394 1.213220608 1.230665933 0.958882295 1.181266744 1.020953475 1.196433213 1 11.03863119 -6.731931379 24.99900789 1.079676513 1.177312573 0.181470397 0.103831284 384.1286386 325430.5517 0.034622423 0.034617637 1.85E-07 6.731931379 0.09763606 NPEAALS(ph)PTFR ddPTM_A459_MK2206_30min_R2 4 NPEAALSPTFR 11 0 B4E349;F5H6D8;B4DTN4;Q86U44 B4E349 METTL3 N6-adenosine-methyltransferase 70 kDa subunit 1 NPEAALS(0.915)PT(0.085)FR;NPEAALS(0.892)PT(0.108)FR;NPEAALS(0.856)PT(0.144)FR;NPEAALS(0.5)PT(0.5)FR 128.35 0.0027922 62784000 100078 113560 99614 132993 110091 118378 118416 97475 95966 106133 TRUE FALSE 107740.0486 107920.7755 102935.081 122127.0465 105768.2742 122882.9577 102867.837 110215.3172 104312.9492 102669.8889 1.049383123 1.051143394 1.002582959 1.189511821 1.03017813 1.196874362 1.001928005 1.073492125 1.016003332 1 16.6476536 -8.170861098 1.330052761 1.001323635 1.079767256 0.150111701 0.06450814 0.825246012 2.730590229 0.058241734 0.018717886 6.75E-09 8.170861098 0.078443621 NPEFFEHR ddPTM_A459_MK2206_30min_R1 1 NPEFFEHR 8 0 O43252 O43252 PAPSS1 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase 0 103.26 0.022916 0 1531.5 1321.9 1167.7 1144.7 1674.6 1245.7 1547.5 1401.3 1241.3 1404.1 FALSE TRUE 1401.237883 1235.84407 1088.439777 1232.864992 1607.897136 1316.230457 1444.269099 1389.048582 1370.337577 1578.050508 0.887955028 0.78314608 0.689736971 0.781258259 1.018913607 0.834086394 0.91522362 0.88023075 0.868373712 1 10.62392767 -6.15709853 11.0792405 0.908970072 0.778174479 0.465742837 0.069566877 0.515482467 52.06843388 0.020370838 0.026310894 6.96E-07 6.15709853 -0.130795593 NPLPPILGS(ph)PTK ddPTM_A459_MK2206_30min_R1 2 NPLPPILGSPTK 12 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 NPLPPILGS(0.857)PT(0.143)K;NPLPPILGS(0.902)PT(0.098)K 149.35 0.00057855 83314000 11823.9 13351.7 12554.4 11720.1 9046.6 8082 9852.3 10779.2 10978.6 11108.9 TRUE FALSE 10818.21522 12482.5019 11702.24231 12622.78413 8686.254766 8539.595856 9195.071044 10684.95859 12119.86476 12485.1544 0.866486298 0.999787548 0.937292558 1.011023471 0.69572666 0.683979996 0.736480363 0.855813092 0.97074208 1 13.60792604 -6.24832545 24.98881509 0.805224998 0.955774983 0.254208973 0.106118805 1005.040342 1915120.527 0.032570701 0.041788526 5.65E-07 6.24832545 0.150549985 NPLPPILGS(ph)PTK ddPTM_A459_MK2206_30min_R2 2 NPLPPILGSPTK 12 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 NPLPPILGS(0.578)PT(0.422)K;NPLPPILGS(0.667)PT(0.333)K 128.06 0.0025043 58459000 258768 282100 276180 248270 245970 172247 295740 206543 215514 288380 TRUE FALSE 278579.477 268091.3242 285387.7034 227985.5468 236311.9819 178801.9803 256908.9828 233538.8793 234259.0182 278970.1842 0.998599466 0.961003503 1.023004319 0.817239833 0.847086876 0.640935807 0.920919142 0.837146378 0.839727797 1 18.08975141 -5.765356593 24.9928083 0.831468972 0.99088255 0.383550061 0.086739776 93.09843054 593996.7143 0.023626095 0.036571174 1.72E-06 5.765356593 0.159413578 NPPGFAFVEFEDPR ddPTM_A459_MK2206_30min_R2 2 NPPGFAFVEFEDPR 14 0 A0A087X2D0;P84103-2;P84103;Q16629;C9JAB2;Q16629-4;A0A0B4J1Z1;Q16629-3;Q16629-2 A0A087X2D0;Q16629 SRSF3;SRSF7 Serine/arginine-rich splicing factor 3;Serine/arginine-rich splicing factor 7 0 ; 124.12 0.021162 7367400 9257.2 7129.6 9285.8 9967.4 9440.2 3729.19 11698.8 9205.4 5582.6 8511 FALSE TRUE 9965.93835 6775.554431 9595.383937 9153.031536 9069.530315 3871.106939 10162.73351 10408.57739 6068.164457 8233.286767 1.210444702 0.822946488 1.165437839 1.111710523 1.101568617 0.470177591 1.234347083 1.264206833 0.737028192 1 13.00725276 -4.712216279 22.8544599 1.002178742 1.210454162 0.070870634 0.235912898 16278.99189 7556560.821 0.058409537 40.69689089 1.94E-05 4.712216279 0.20827542 NPPGFAFVEFEDPRDAADAVR ddPTM_A459_MK2206_30min_R2 1 NPPGFAFVEFEDPRDAADAVR 21 1 A0A087X2D0;P84103-2;P84103 A0A087X2D0 SRSF3 Serine/arginine-rich splicing factor 3 0 65.085 0.029175 1790800 3232.5 3528.6 2314.5 2501.9 2075.6 1036.2 2368.8 2295.5 1812.5 2804.9 FALSE TRUE 3479.982685 3353.374855 2391.664275 2297.486767 1994.101515 1075.633317 2057.773715 2595.529732 1970.147974 2713.376343 1.282528572 1.235867949 0.881434778 0.846726173 0.734915199 0.396418772 0.75838124 0.956568276 0.726087253 1 11.40587345 -5.32797828 1.775212028 0.749521284 1.315583479 0.603579328 0.154659455 0.285472645 1.606877428 0.047496123 0.185624293 4.70E-06 5.32797828 0.566062195 NPPGFAFVEFEDPRDAEDAVR ddPTM_A459_MK2206_30min_R1 2 NPPGFAFVEFEDPRDAEDAVR 21 1 Q16629;C9JAB2;Q16629-4;A0A0B4J1Z1;Q16629-3;Q16629-2 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 0 ; 109.5 0.00032767 12353300 629.95 423.54 434.81 448.11 468.96 308 369.64 517.82 204.32 194.841 FALSE TRUE 576.3694445 395.967469 405.2963087 482.6235098 450.2803302 325.4386938 344.98199 513.2927543 225.5597952 218.9793741 2.632071842 1.808240939 1.850842393 2.203967894 2.056268231 1.486161403 1.575408604 2.344023297 1.030050415 1 7.774651177 -8.306348725 0.098764932 2.41E-12 3.15553325 0.501920177 0.359970264 11.27794443 0.942534778 15.09232503 12.91437801 4.94E-09 8.306348725 3.15553325 NPPGFAFVEFEDPRDAEDAVR ddPTM_A459_MK2206_30min_R2 2 NPPGFAFVEFEDPRDAEDAVR 21 1 Q16629;C9JAB2;Q16629-4;A0A0B4J1Z1;Q16629-3;Q16629-2 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 0 ; 106.31 0.00039516 5646500 0 979.55 0 1589.97 1710.04 1380.2 692.26 1475.18 2167.3 2137.5 FALSE TRUE 0 930.9069714 0 1460.064365 1642.895237 1432.724478 601.3654304 1667.991091 2355.807836 2067.75355 0 0.450202091 0 0.706111405 0.794531455 0.692889381 0.290830322 0.806668227 1.139307843 1 11.01384853 -6.293381454 0.353487525 1.016050711 2.54E-13 0.568508247 0.244717103 2.033785446 0.432927091 0.28541754 0.807118693 5.09E-07 6.293381454 -1.016050711 NPQMPQYSSPQPGS(ph)ALSPR ddPTM_A459_MK2206_30min_R2 1 NPQMPQYSSPQPGSALSPR 19 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3;A0A087WUV6 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 NPQMPQYSSPQPGS(0.95)ALS(0.049)PR 180.76 4.55E-13 16223000 22988 25140 20310 22591 23023 21172 24677 19481 20967 26150 TRUE FALSE 24747.97895 23891.58416 20987.12526 20745.24303 22119.00134 21977.7153 21436.88026 22027.23359 22790.67176 25296.72764 0.978307523 0.944453547 0.82963795 0.820076151 0.874381922 0.868796771 0.847417127 0.870754269 0.900933594 1 14.62666315 -10.44117111 7.784286621 1 0.878229244 0.364829104 0.046656981 4.19E-10 4.68E-11 0.048875692 0.011854096 3.62E-11 10.44117111 -0.121770756 NPQMPQYSSPQPGSALS(ph)PR ddPTM_A459_MK2206_30min_R1 4 NPQMPQYSSPQPGSALSPR 19 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3;A0A087WUV6 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 NPQMPQYSSPQPGS(0.359)ALS(0.641)PR;NPQMPQYSSPQPGS(0.002)ALS(0.998)PR;NPQMPQYS(0.002)S(0.009)PQPGS(0.181)ALS(0.808)PR;NPQMPQYS(0.001)S(0.029)PQPGS(0.123)ALS(0.847)PR 228.65 1.49E-23 21187300 4052.82 3945.46 4041.98 3459.2 4067.08 3405.69 3867.57 4052.77 3556.16 3491.89 TRUE FALSE 3708.106377 3688.609837 3767.621659 3725.628183 3905.079591 3598.517225 3609.571462 4017.337059 3925.835558 3924.491696 0.944862842 0.939894927 0.960027935 0.949327575 0.9950536 0.916938423 0.919755154 1.023657933 1.00034243 1 11.93829009 -7.769053816 24.99821768 1.009000149 0.947647069 0.634399166 0.021361488 117.3657865 385304.8906 0.011868532 0.00587178 1.70E-08 7.769053816 -0.061353079 NPQMPQYSSPQPGSALS(ph)PR ddPTM_A459_MK2206_30min_R2 2 NPQMPQYSSPQPGSALSPR 19 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3;A0A087WUV6 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 NPQMPQYSS(0.001)PQPGS(0.008)ALS(0.992)PR;NPQMPQY(0.002)S(0.075)S(0.039)PQPGS(0.026)ALS(0.859)PR 252.37 7.15E-38 24041100 34955 40670.5 33770.9 41739 35071.3 32541.5 42658 31115.9 32453 38649.7 TRUE FALSE 37631.18168 38650.86211 34896.80495 38328.79018 33694.22454 33779.88959 37056.95336 35182.85497 35275.70328 37388.56345 1.006489103 1.033761625 0.933355062 1.025147442 0.90119067 0.90348188 0.991130708 0.941005797 0.943489132 1 15.19030942 -5.356665303 1.273842379 0.948702721 1.026183937 0.244741159 0.040564163 0.83999345 2.194645172 0.012829955 0.065010569 4.40E-06 5.356665303 0.077481216 NPS(ph)PPPPGR ddPTM_A459_MK2206_30min_R1 1 NPSPPPPGR 9 0 E9PL53;E9PMD2;J3KND1;E9PRZ1;Q96ER3 E9PL53 SAAL1 Protein SAAL1 1 NPS(1)PPPPGR 94.538 0.023178 39351000 4591 4633.6 4500.4 3258.7 3753.8 4020 5012.7 3858.4 4772.1 5373 TRUE FALSE 4200.511342 4331.951798 4194.925387 3509.685639 3604.278197 4247.608926 4678.311929 3824.666416 5268.176872 6038.647804 0.695604625 0.717371163 0.694679591 0.581203897 0.596868424 0.703403984 0.774728396 0.63336471 0.872410023 1 12.56000982 -8.455354003 3.237210376 0.998774158 0.675325173 0.790296102 0.055632737 0.103712521 2.224844141 0.058133442 0.015472315 3.50E-09 8.455354003 -0.323448985 NPS(ph)SSVPPPSAGSVK ddPTM_A459_MK2206_30min_R2 1 NPSSSVPPPSAGSVK 15 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 NPS(0.747)S(0.246)S(0.005)VPPPS(0.001)AGSVK 88.108 0.017967 2655700 15563 15115 15237 13764 13594 9396.9 10315 8431.5 6240.7 15024 TRUE FALSE 16754.51525 14364.41108 15744.99398 12639.43717 13060.23126 9754.505614 8960.628109 9533.526 6783.504805 14533.76811 1.152799131 0.988347342 1.083338736 0.869660027 0.898612883 0.671161501 0.616538536 0.655956936 0.466740955 1 13.82712117 -6.318612481 1.11637669 0.648427736 1.078262652 0.586634855 0.137986118 0.31567057 0.820568607 0.057107858 0.080484244 4.80E-07 6.318612481 0.429834916 NPSDSAVHS(ph)PFTK ddPTM_A459_MK2206_30min_R2 2 NPSDSAVHSPFTK 13 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 NPSDSAVHS(0.997)PFT(0.003)K;NPSDSAVHS(0.997)PFT(0.003)K 81.606 0.022966 129809000 375840 369550 362240 414840 391170 355410 424960 288150 272894 381780 TRUE FALSE 404614.5994 351198.6844 374316.9008 380946.245 375810.7003 368935.3766 369162.2415 325812.1944 296629.8268 369322.5499 1.095558881 0.950926729 1.013523006 1.031473018 1.017567707 0.998951666 0.999565939 0.882188739 0.803172801 1 18.49452183 -7.737856768 5.040588131 0.880774507 1.013804787 0.487234002 0.056090164 0.135470489 8.900876592 0.027189718 0.014358911 1.83E-08 7.737856768 0.13303028 NPSINQILLS(ph)PEK ddPTM_A459_MK2206_30min_R2 1 NPSINQILLSPEK 13 0 Q14997-3;Q14997-2;Q14997 Q14997-3 PSME4 Proteasome activator complex subunit 4 1 NPSINQILLS(1)PEK 91.657 0.019496 3470800 24984 26072 23018 25280 26427 16927 27260 20521 17498 27737 TRUE FALSE 26896.79425 24777.30239 23785.40863 23214.54313 25389.34319 17571.16885 23680.72925 23203.16516 19019.94441 26831.94396 1.002416906 0.923425542 0.886458643 0.865183051 0.946235697 0.654860075 0.882557346 0.864759005 0.708854507 1 14.71166396 -4.656629005 0.694353711 0.828968751 1.127159377 0.211600645 0.095512944 5.278974027 1.710956846 0.039846224 1.29161952 2.20E-05 4.656629005 0.298190626 NPYLLS(ph)EEEDDDVDGDVNVEK ddPTM_A459_MK2206_30min_R1 2 NPYLLSEEEDDDVDGDVNVEK 21 0 G3V5V3;O60524-4;O60524-5;O60524-3;O60524 G3V5V3 NEMF Nuclear export mediator factor NEMF 1 NPYLLS(1)EEEDDDVDGDVNVEK;NPYLLS(1)EEEDDDVDGDVNVEK 118.43 4.98E-05 5737200 2721.4 2926.5 2639.4 1958.08 2169.4 2298.01 2389.2 2016.27 2402.6 2254.7 TRUE FALSE 2489.930639 2735.984318 2460.244882 2108.891661 2082.988204 2428.12134 2229.820827 1998.641964 2652.358868 2534.029258 0.982597431 1.079697209 0.970882587 0.832228615 0.822006375 0.958205724 0.879950703 0.78872095 1.046696229 1 11.30721747 -5.541007531 6.507901714 0.893275418 1.030211223 0.286993939 0.079872688 0.160047898 27.06092442 0.020830287 0.037673991 2.88E-06 5.541007531 0.136935805 NQEIQQGEDAFPPSS(ph)PLFAEPYK ddPTM_A459_MK2206_30min_R1 1 NQEIQQGEDAFPPSSPLFAEPYK 23 0 Q9UHB7;Q9UHB7-2;Q9UHB7-3;C9JCE0 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 NQEIQQGEDAFPPS(0.432)S(0.557)PLFAEPY(0.011)K 57.339 0.010648 2322700 654.96 683.81 736.68 438.4 609.37 517.04 714.56 392.03 555.7 439.34 TRUE FALSE 599.2522127 639.2938447 686.6762141 472.165644 585.0975025 546.314358 666.8930062 388.602523 613.4670036 493.768756 1.213629265 1.294723161 1.390683808 0.956248524 1.184962587 1.10641743 1.350618074 0.787013188 1.242417622 1 8.94769174 -5.21981932 0.230858872 0.99579581 1.482237365 0.168474031 0.164785736 15.76373287 0.888381753 0.283949752 2.19356738 6.03E-06 5.21981932 0.486441555 NQESLGS(ph)PHICDLGK ddPTM_A459_MK2206_30min_R2 1 NQESLGSPHICDLGK 15 0 A0A087WUA7;A4D1E1 A0A087WUA7 ZNF804B Zinc finger protein 804B 1 NQES(0.003)LGS(0.997)PHICDLGK 86.214 0.019918 5256300 22175 25356 22795 22356 20847 15219 25019 21146 15841 21891 TRUE FALSE 23872.73505 24096.85791 23554.97392 20529.44329 20028.44203 15798.16971 21733.97525 23909.85481 17218.82155 21176.69846 1.127311469 1.137894935 1.112306244 0.969435501 0.945777363 0.746016653 1.026315565 1.129064327 0.813102268 1 14.37019006 -5.770594836 3.551870463 0.944929314 1.131919154 0.403085703 0.100287644 0.241525167 6.44882524 0.029834181 0.050391282 1.70E-06 5.770594836 0.18698984 NQGETPTTEVPAPFFLPASLSANNT(ph)PTRR ddPTM_A459_MK2206_30min_R2 1 NQGETPTTEVPAPFFLPASLSANNTPTRR 29 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 NQGET(0.002)PT(0.002)T(0.005)EVPAPFFLPAS(0.16)LS(0.16)ANNT(0.466)PT(0.206)RR 49.208 0.036814 4020400 4929.1 5538.4 5010.7 5601.2 6318.9 5813.8 5568 4422.3 6234.2 7048.7 TRUE FALSE 5306.475686 5263.37111 5177.754237 5143.564043 6070.788236 6035.048233 4836.914912 5000.309794 6776.439447 6818.701496 0.778223785 0.771902262 0.759346078 0.754331898 0.890314415 0.885072948 0.70936012 0.733322876 0.993802039 1 12.73528131 -8.271340067 24.4491838 0.9969011 0.787198363 0.695551306 0.056003031 344.8454039 851563.1928 0.056431668 0.015314468 5.35E-09 8.271340067 -0.209702738 NQGGGLSS(ph)SGAGEGQGPK ddPTM_A459_MK2206_30min_R2 1 NQGGGLSSSGAGEGQGPK 18 0 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 NQGGGLS(0.001)S(0.991)S(0.008)GAGEGQGPK 303.73 2.95E-197 0 11783 14993 14624 14155 12868 10554 14725 11541 12058 12702 TRUE FALSE 12685.11554 14248.46942 15111.55686 12998.49122 12362.73766 10955.63987 12791.58981 13049.44833 13106.78304 12287.53478 1.03235643 1.159587312 1.229828206 1.057859974 1.006120258 0.891606011 1.041021657 1.062007031 1.066673119 1 13.58490788 -5.970227841 8.739843166 1.011797605 1.14301483 0.448933129 0.064080666 0.245775088 64.91739979 0.019264939 0.028452768 1.07E-06 5.970227841 0.131217225 NQGGGLSSS(ph)GAGEGQGPK ddPTM_A459_MK2206_30min_R2 1 NQGGGLSSSGAGEGQGPK 18 0 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 NQGGGLSS(0.227)S(0.773)GAGEGQGPK 274.68 3.10E-130 0 11549 13362 13352 13137 12785 9993.9 14506 10791 9666.5 11992 TRUE FALSE 12433.20032 12698.46251 13797.14902 12063.66508 12282.99666 10374.22487 12601.34478 12201.42075 10507.2747 11600.70202 1.071762752 1.094628798 1.18933742 1.039908193 1.058814944 0.894275609 1.086257086 1.051782963 0.905744728 1 13.50192449 -6.16260953 2.375899387 0.998488485 1.114310341 0.392885285 0.065088867 0.320444445 3.543340005 0.021014588 0.028699337 6.88E-07 6.16260953 0.115821856 NQGGYDRYS(ph)GGNYR ddPTM_A459_MK2206_30min_R1 1 NQGGYDRYSGGNYR 14 1 P98179 P98179 RBM3 RNA-binding protein 3 1 NQGGYDRYS(1)GGNYR 158.89 0.0014352 25050000 5847.2 7342.1 7854.6 6097.4 5641.4 6293 6602.4 5480.1 6270.6 7277.8 TRUE FALSE 5349.864935 6864.127956 7321.451636 6567.022804 5416.691092 6649.304222 6161.965943 5432.188063 6922.45131 8179.428809 0.65406339 0.839194046 0.895105491 0.802870586 0.662233417 0.812930142 0.753349175 0.664128045 0.846324538 1 12.99778438 -8.535562987 22.42273777 1.000000005 0.766492439 0.475265918 0.077115575 447.9635133 791894.7623 0.076777719 0.019823922 2.91E-09 8.535562987 -0.233507565 NQGGYDRYS(ph)GGNYRDNYDN ddPTM_A459_MK2206_30min_R2 2 NQGGYDRYSGGNYRDNYDN 19 2 P98179 P98179 RBM3 RNA-binding protein 3 1 NQGGY(0.001)DRY(0.059)S(0.92)GGNY(0.018)RDNY(0.001)DN;NQGGYDRY(0.014)S(0.982)GGNY(0.003)RDNYDN 61.361 0.04052 18876100 21415.8 31817 29524 37606 42040 34194 34609 26910.1 37166 28418 TRUE FALSE 23055.41011 30237.01405 30508.31542 34533.4695 40389.29837 35495.27663 30064.79673 30427.34247 40398.6315 27490.72299 0.838661469 1.09989883 1.109767664 1.256186297 1.469197386 1.291172904 1.093634269 1.106822199 1.469536888 1 14.74665723 -4.667886986 1.21537755 1.244632726 0.586315854 0.398752445 0.146770469 1.943989853 2.064768353 0.045234825 1.727303552 2.15E-05 4.667886986 -0.658316871 NQGGYDRYSGGNYRDNY(ph)DN ddPTM_A459_MK2206_30min_R1 1 NQGGYDRYSGGNYRDNYDN 19 2 P98179 P98179 RBM3 RNA-binding protein 3 1 NQGGYDRYS(0.048)GGNY(0.026)RDNY(0.926)DN 89.43 0.023731 5411000 1157.9 1720 1901.5 1857.9 1778.8 1340.2 1277.6 1591.6 736.25 614.26 TRUE FALSE 1059.414525 1608.027687 1772.431478 2000.99578 1707.946629 1416.080966 1192.373635 1577.684809 812.7858222 690.3591662 1.534584571 2.329262456 2.567404859 2.898485133 2.473997178 2.05122353 1.727178682 2.285310149 1.177337626 1 9.431203323 -8.219460337 0.870901736 0.964881867 2.358041648 0.565764844 0.390625356 0.432116162 0.686420759 0.387799731 0.144550516 6.03E-09 8.219460337 1.39315978 NQGGYGGS(ph)SSSSSYGSGR ddPTM_A459_MK2206_30min_R1 1 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 NQGGYGGS(0.301)S(0.301)S(0.301)S(0.085)S(0.011)SYGSGR 165.16 4.68E-07 69517000 653.84 618.03 1133 808.29 962 794.25 754.99 781.32 541.73 602.8 TRUE FALSE 598.2274745 577.7961347 1056.095117 870.5446359 923.6815029 839.2197486 704.6259947 774.4890016 598.0447721 677.4794149 0.883019412 0.852861536 1.558859345 1.284975774 1.363408958 1.238738374 1.04006997 1.143191933 0.882749732 1 9.404033301 -7.827525057 1.541598431 0.959404667 1.203383327 0.160799438 0.204445575 0.811305143 3.568785376 0.181956595 0.067603672 1.49E-08 7.827525057 0.24397866 NQGGYGGS(ph)SSSSSYGSGR ddPTM_A459_MK2206_30min_R2 2 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 NQGGYGGS(0.42)S(0.42)S(0.123)S(0.036)SSYGSGR;NQGGYGGS(0.333)S(0.333)S(0.333)S(0.002)SSYGSGR 306.75 6.02E-97 58003000 40495 45445 39250 52098 47808 42950 58722 47145 35635 44110 TRUE FALSE 43595.32834 43188.26738 40558.57541 47841.42675 45930.8177 44584.49235 51011.73086 53307.01337 38734.46789 42670.69431 1.021669064 1.012129474 0.950501886 1.121177603 1.07640193 1.044850408 1.195474592 1.249265198 0.907753401 1 15.38095796 -5.769408522 24.89012225 1.097948404 0.996503071 0.157671286 0.092191669 264.8449097 827196.0688 0.02577625 0.039020517 1.70E-06 5.769408522 -0.101445333 NQGGYGGSSS(ph)SSSYGSGR ddPTM_A459_MK2206_30min_R1 1 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 NQGGYGGS(0.127)S(0.127)S(0.368)S(0.368)S(0.009)S(0.001)YGSGR 280.31 5.52E-67 72669000 729.04 679.15 875 869.64 656.43 715.25 869 855.25 698.71 654.65 TRUE FALSE 667.0313197 634.9372116 815.6074379 936.6198235 630.2830031 755.7468369 811.0305956 847.7726394 771.3434049 735.7529844 0.906596825 0.86297606 1.108534325 1.273008528 0.856650284 1.027174681 1.102313702 1.152251717 1.048372784 1 9.523077679 -5.259404332 24.9501193 1.075582751 0.884786426 0.346572877 0.102144364 187.1031394 2293882.024 0.027103901 0.064733848 5.50E-06 5.259404332 -0.190796325 NQGGYGGSSS(ph)SSSYGSGR ddPTM_A459_MK2206_30min_R2 1 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 NQGGYGGS(0.055)S(0.055)S(0.579)S(0.253)S(0.058)SYGSGR 258.17 1.75E-42 56917000 37807 38276 36723 40227 33086 38686 43608 40114 29855 39400 TRUE FALSE 40701.53299 36375.2695 37947.32649 36940.32542 31786.8774 40158.22284 37882.21722 45357.03753 32451.73393 38114.38123 1.067878624 0.954371246 0.995617016 0.969196514 0.833986447 1.053623896 0.993908756 1.190024239 0.851430166 1 15.21804783 NQGGYGGSSSSS(ph)SYGSGR ddPTM_A459_MK2206_30min_R1 1 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 NQGGYGGSSSS(0.005)S(0.969)S(0.026)YGSGR 199.91 1.75E-10 2531000 858.22 570.37 759.22 687.72 909.03 720.6 666.54 596.47 535.59 568.57 TRUE FALSE 785.2238823 533.2388093 707.6862617 740.6883136 872.8214102 761.3997493 622.0763328 591.2551257 591.2664971 639.0087441 1.228815552 0.83447811 1.107475083 1.15912078 1.365899009 1.191532598 0.973502066 0.925269225 0.925287021 1 9.319691863 -7.341166601 5.584664673 0.946393237 1.141945383 0.354846949 0.126606019 0.293383418 15.63359319 0.059147191 0.039516635 4.56E-08 7.341166601 0.195552146 NQGGYGGSSSSS(ph)SYGSGR ddPTM_A459_MK2206_30min_R2 4 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 NQGGYGGS(0.079)S(0.079)S(0.048)S(0.17)S(0.613)S(0.003)Y(0.003)GS(0.005)GR;NQGGYGGS(0.164)S(0.164)S(0.017)S(0.164)S(0.478)S(0.014)YGSGR;NQGGYGGSSS(0.001)S(0.106)S(0.83)S(0.063)YGSGR;NQGGYGGS(0.061)S(0.061)S(0.201)S(0.201)S(0.475)SYGSGR 258.68 1.64E-42 60709500 63835.2 68532.7 67067.7 72213.3 68920.4 57401.3 78927.3 65210.8 55823.7 64388 TRUE FALSE 68722.47199 65129.46577 69303.70364 66313.24239 66214.2388 59585.74669 68564.0507 73734.07546 60679.14452 62287.02483 1.103319225 1.045634559 1.11265073 1.064639748 1.063050274 0.956631768 1.100775818 1.183779056 0.974185951 1 15.92664404 NQGGYGGSSSSSS(ph)YGSGR ddPTM_A459_MK2206_30min_R1 2 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 NQGGYGGSSSSS(0.002)S(0.998)YGSGR;NQGGYGGSSSSS(0.003)S(0.997)YGSGR 316.33 2.26E-112 21319900 3145.3 3908.6 3429.4 2523.59 2964.6 3240.7 2745.64 2798.64 3025.3 2694.44 TRUE FALSE 2877.775718 3654.14943 3196.621883 2717.957339 2846.513704 3424.185633 2562.483365 2774.171786 3339.790761 3028.247569 0.950310585 1.206687811 1.055601238 0.897534722 0.939987118 1.130748248 0.846193485 0.916098081 1.102879036 1 11.56426744 -5.548308728 14.26967307 0.97254807 1.091657758 0.155353391 0.100904564 2.887847077 1618.959948 0.026762059 0.046429173 2.83E-06 5.548308728 0.119109687 NQGGYGGSSSSSSYGS(ph)GR ddPTM_A459_MK2206_30min_R1 2 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 NQGGYGGSSSSSSYGS(1)GR;NQGGYGGSSSSSSYGS(1)GR 258.68 1.08E-94 8779700 3488.1 3356.7 3956 2726.7 3145.5 3136 3342.2 3008.7 2713.8 2200.26 TRUE FALSE 3191.418778 3138.17822 3687.477742 2936.710906 3020.208074 3313.55761 3119.247936 2982.395253 2995.909221 2472.84482 1.290585949 1.269055864 1.491188494 1.187583985 1.221349617 1.339977981 1.261400599 1.206058394 1.211523342 1 11.27195599 -9.856765498 0.282070928 0.8874711 1.33247728 0.577957551 0.076589856 6.096104851 0.608019043 0.755350498 0.107788473 1.39E-10 9.856765498 0.44500618 NQGGYGGSSSSSSYGS(ph)GR ddPTM_A459_MK2206_30min_R2 4 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 NQGGYGGSSSSSSYGS(1)GR;NQGGYGGSSSSSSYGS(1)GR;NQGGYGGSSSSSSYGS(1)GR;NQGGYGGSSSSSSYGS(1)GR 265.38 2.45E-43 34226600 36386.5 48129.9 39134.2 39210.4 43865.1 44637.7 59440 50091.8 39069.3 38476.1 TRUE FALSE 39172.27842 45739.83915 40438.9147 36006.78489 42142.73577 46336.41895 51635.4566 56638.97025 42467.47709 37220.62801 1.052434645 1.228884132 1.086465137 0.967387893 1.132241395 1.244912336 1.387280639 1.521709151 1.140966162 1 15.18381478 -6.801783518 3.298840395 1.306281927 1.090553096 0.226049131 0.145256901 0.294910727 6.595994233 0.052580343 0.047803809 1.58E-07 6.801783518 -0.215728831 NQGGYGGSSSSSSYGSGR ddPTM_A459_MK2206_30min_R1 3 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 0 ;; 345.69 1.58E-162 15524900 898.52 919.62 868 1103.23 943.18 890.61 907.2 864.62 726.27 632 FALSE TRUE 822.0961557 859.7525709 809.0825784 1188.200966 905.6111434 941.0355685 846.6823433 857.0607185 801.7683655 710.2969314 1.15739787 1.210412903 1.13907655 1.67282289 1.274975441 1.32484814 1.192011828 1.206623147 1.128779149 1 9.472278442 -8.279166499 0.987965776 1.007096047 1.298017167 0.299481452 0.141584846 0.681434176 1.388110009 0.139840209 0.048532 5.26E-09 8.279166499 0.290921119 NQGGYGGSSSSSSYGSGR ddPTM_A459_MK2206_30min_R2 2 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 0 ; 278.85 9.35E-66 1088500 1581.4 2963.22 1286.82 1441.4 925.51 947.17 1082.65 1039.26 1835.22 1866.37 FALSE TRUE 1702.4732 2816.070804 1329.721937 1323.633009 889.1698271 983.2152181 940.4967545 1175.09485 1994.844118 1805.4705 0.942952654 1.55974346 0.736496075 0.733123587 0.492486489 0.544575621 0.520915049 0.650852423 1.104888791 1 10.81815913 -5.365051933 7.047166818 0.685918548 1.248461528 0.441364548 0.235272793 0.192431503 11.26588682 0.060408311 0.126847513 4.31E-06 5.365051933 0.56254298 NQGIEGS(ph)PGGR ddPTM_A459_MK2206_30min_R2 1 NQGIEGSPGGR 11 0 Q6ZUT6;H0YM82;Q6ZUT6-3;Q6ZUT6-4 Q6ZUT6 C15orf52 Uncharacterized protein C15orf52 1 NQGIEGS(1)PGGR 89.43 0.029247 8327200 42794 47453 43173 44861 51508 40974 53248 49923 42583 60638 TRUE FALSE 46070.34154 45096.55302 44612.36627 41195.7128 49485.53711 42533.29428 46256.47364 56448.10751 46286.79237 58659.38703 0.785387367 0.768786639 0.760532432 0.702286793 0.843608152 0.725089307 0.788560467 0.962303058 0.789077328 1 15.84007437 -8.440586628 0.524998231 0.998488912 0.753819875 0.561069656 0.061016726 0.675819115 0.461011226 0.066056287 0.032042286 3.63E-09 8.440586628 -0.244669037 NQIPRT(ph)PENLITEIR ddPTM_A459_MK2206_30min_R1 1 NQIPRTPENLITEIR 15 1 Q7Z4H7;Q5VY60;Q7Z4H7-3;Q5SYF9 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 NQIPRT(1)PENLITEIR 121.03 0.0023846 7018700 3128.4 3622.7 3747.2 3592.6 2836.8 2511.2 2748.5 3212 2095.1 2137.3 TRUE FALSE 2862.313152 3386.861572 3492.850504 3869.302674 2723.804249 2653.381974 2565.15258 3183.917823 2312.893142 2402.08486 1.191595351 1.409967495 1.45409122 1.61081015 1.133933399 1.104616252 1.067885911 1.325480992 0.96286904 1 11.2300714 -6.364062002 7.853340966 1.112391779 1.418314903 0.583045887 0.13131356 0.218023651 14.89015997 0.040785752 0.046246463 4.32E-07 6.364062002 0.305923123 NQIPRT(ph)PENLITEIR ddPTM_A459_MK2206_30min_R2 1 NQIPRTPENLITEIR 15 1 Q7Z4H7;Q5VY60;Q7Z4H7-3;Q5SYF9 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 NQIPRT(1)PENLITEIR 89.26 0.023228 2717500 18798 26508 27390 27904 33532 28067 24718 21812 26414 23597 TRUE FALSE 20237.18933 25191.65127 28303.16893 25624.15394 32215.3652 29135.10935 21472.49691 24662.90329 28711.44197 22827.03182 0.88654493 1.103588564 1.239897029 1.122535516 1.41128139 1.276342434 0.940660927 1.080425326 1.257782536 1 14.47845566 -10.71985996 14.45865708 1.00027409 1.150939475 0.078480519 0.149991819 2.11E-10 0 0.151919118 0.036845798 1.91E-11 10.71985996 0.150665385 NQKPSQVNGAPGS(ph)PTEPAGQK ddPTM_A459_MK2206_30min_R1 4 NQKPSQVNGAPGSPTEPAGQK 21 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 NQKPSQVNGAPGS(0.966)PT(0.034)EPAGQK;NQKPSQVNGAPGS(0.963)PT(0.036)EPAGQK;NQKPSQVNGAPGS(0.967)PT(0.033)EPAGQK;NQKPSQVNGAPGS(0.897)PT(0.103)EPAGQK 188.01 7.69E-17 376331000 38551.8 40549.3 43782.1 38032.7 30352.6 26320.14 33572.01 37084.7 39534.8 36464.8 TRUE FALSE 35272.76697 37909.5332 40810.29304 40961.98514 29143.59167 27810.36358 31332.48247 36760.47238 43644.58394 40982.33472 0.860682223 0.925021316 0.995802053 0.999503455 0.711125705 0.67859393 0.764536298 0.896983362 1.064960897 1 15.32271456 -10.87590798 6.285305663 1.000010947 0.872446878 0.082798609 0.121315381 2.07E-05 2.13E-06 0.130700709 0.031696859 1.33E-11 10.87590798 -0.127564069 NQKPSQVNGAPGS(ph)PTEPAGQK ddPTM_A459_MK2206_30min_R2 6 NQKPSQVNGAPGSPTEPAGQK 21 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 NQKPSQVNGAPGS(0.999)PT(0.001)EPAGQK;NQKPSQVNGAPGS(0.988)PT(0.012)EPAGQK;NQKPSQVNGAPGS(0.985)PT(0.015)EPAGQK;NQKPSQVNGAPGS(0.986)PT(0.014)EPAGQK;NQKPSQVNGAPGS(0.5)PT(0.5)EPAGQK;NQKPSQVNGAPGS(0.993)PT(0.007)EPAGQK 158.12 8.14E-08 1191280000 516738 534612 529945 468255 536663 373389 622212 406708 413516 549276 TRUE FALSE 556299.8586 508063.9455 547613.1018 429997.0686 515590.9141 387598.58 540514.817 459866.132 449482.8742 531353.1691 1.046949357 0.956169973 1.030600989 0.80924909 0.970335634 0.729455666 1.017242106 0.865462293 0.845921132 1 19.01931156 -5.744633912 24.99998735 0.88731222 1.00573313 0.288049605 0.086284473 302.2419754 449614.6931 0.021863985 0.037742287 1.80E-06 5.744633912 0.118420909 NQMPSPT(ph)STGTPSPGPR ddPTM_A459_MK2206_30min_R2 1 NQMPSPTSTGTPSPGPR 17 0 H0YJN5;Q9Y572 H0YJN5 RIPK3 Receptor-interacting serine/threonine-protein kinase 3 1 NQMPS(0.201)PT(0.384)S(0.384)T(0.032)GTPSPGPR 72.801 0.03603 24548000 0 39999 16689 115020 60151 405730 12050 25787 178410 3302.1 TRUE FALSE 0 38012.70782 17245.40293 105622.4981 57789.16951 421170.3395 10467.82053 29157.44944 193927.7793 3194.352747 0 11.89997187 5.398715888 33.06538333 18.09104193 131.8484127 3.276977013 9.127811405 60.70956924 1 11.64130792 -2.112658357 16.63910053 10 19.56782548 0 42.74074686 0 0 10.30944724 0 0.007715101 2.112658357 9.567825479 NQNYLVPS(ph)PVLR ddPTM_A459_MK2206_30min_R2 1 NQNYLVPSPVLR 12 0 C9J3R1;C9IZP0;J3KR59;J3KR68;Q9UID6 C9J3R1 ZNF639 Zinc finger protein 639 1 NQNYLVPS(1)PVLR 101.45 0.012517 7987800 46898 54093 54998 53272 51766 45666 48683 40632 39156 47128 TRUE FALSE 50488.54694 51406.82028 56831.60587 48919.50719 49733.40674 47403.85163 42290.86362 45942.74191 42561.7181 45590.21722 1.107442562 1.127584456 1.24657458 1.073026412 1.090878916 1.039781219 0.927630229 1.007732464 0.933571294 1 15.47643666 -6.692203039 1.343067867 0.966347794 1.15003316 0.724267042 0.047778247 0.219459699 0.829066016 0.021916776 0.021051469 2.03E-07 6.692203039 0.183685366 NQS(ph)FCPTVNLDK ddPTM_A459_MK2206_30min_R2 1 NQSFCPTVNLDK 12 0 P46776;E9PLL6;E9PJD9 P46776 RPL27A 60S ribosomal protein L27a 1 NQS(0.83)FCPT(0.17)VNLDK 113.43 0.0059588 5169200 20350 34492 22496 28161 28773 28685 36612 31591 31558 29406 TRUE FALSE 21908.01165 32779.17744 23246.00541 25860.15622 27643.22745 29776.62778 31804.80042 35720.05217 34302.8578 28446.48463 0.770148295 1.152310307 0.817183765 0.909080913 0.971762515 1.046759491 1.118057322 1.255693019 1.205873353 1 14.79596276 -7.003611923 1.725596588 1.171776732 0.924770336 0.461606492 0.1127948 0.310930285 1.866796219 0.051344833 0.038847797 9.92E-08 7.003611923 -0.247006395 NQS(ph)LVEENEK ddPTM_A459_MK2206_30min_R1 1 NQSLVEENEK 10 0 O95239;O95239-2;Q2VIQ3 O95239 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B 1 NQS(1)LVEENEK 93.228 0.025515 13931000 5346.3 5572 6005.4 5187.9 4981.4 4251.9 4856.4 5276 4821.3 4361.6 TRUE FALSE 4891.56911 5209.261787 5597.77018 5587.472957 4782.98029 4492.638904 4532.438417 5229.872488 5322.491388 4901.947936 0.997882714 1.06269219 1.14194811 1.139847471 0.975730536 0.916500738 0.92461986 1.066896784 1.085791089 1 12.25913945 -6.275428743 24.7239365 0.990831716 1.087982269 0.332371443 0.062756846 858.813679 1517809.869 0.021778262 0.024821651 5.30E-07 6.275428743 0.097150553 NQS(ph)LVEENEK ddPTM_A459_MK2206_30min_R2 2 NQSLVEENEK 10 0 O95239;O95239-2;Q2VIQ3 O95239 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B 1 NQS(1)LVEENEK;NQS(1)LVEENEK 127.78 0.0032296 50199000 221420 236240 239380 234480 279140 199267 276090 207141 208129 239970 TRUE FALSE 238372.0854 224508.6651 247360.8097 215322.2339 268179.561 206850.2453 239839.0514 234215.0399 226231.6842 232139.7986 1.026847128 0.967126992 1.065568297 0.927554152 1.155250253 0.891058951 1.033166449 1.008939619 0.974549326 1 17.82463436 -8.232906725 20.43570823 0.987274709 1.008875377 0.016022897 0.069363812 389.5716253 279023.9904 0.043173177 0.01629612 5.85E-09 8.232906725 0.021600668 NQS(ph)PEPSSGPR ddPTM_A459_MK2206_30min_R1 1 NQSPEPSSGPR 11 0 C9JHG2;G3XAJ6;Q14699 C9JHG2 RFTN1 Raftlin 1 NQS(0.902)PEPS(0.049)S(0.049)GPR 108.72 0.0098109 3251300 1055.5 1196 1208.6 1083.1 1394.8 1383.9 1808.8 1735 1587.4 1801.4 TRUE FALSE 965.7241823 1118.140183 1126.563599 1166.52055 1339.242162 1462.255222 1688.138252 1719.831078 1752.415911 2024.571032 0.477001877 0.552284985 0.556445579 0.576181587 0.661494283 0.722254344 0.833825154 0.849479248 0.865573933 1 10.98340055 -6.98808573 0.438132967 0.992843769 0.457802081 0.981727347 0.022056496 0.148278726 0.061897793 0.023355889 0.029880663 1.03E-07 6.98808573 -0.535041687 down NQS(ph)PPVGYMSQPK ddPTM_A459_MK2206_30min_R2 1 NQSPPVGYMSQPK 13 0 Q9H7U1-3 Q9H7U1-3 CCSER2 Serine-rich coiled-coil domain-containing protein 2 1 NQS(1)PPVGYMSQPK 120.92 0.0029409 2859700 9369.4 12630 9815.3 10526 11384 10518 12415 8997.3 11138 9337.8 TRUE FALSE 10086.72847 12002.81257 10142.5372 9665.992129 10937.00696 10918.26986 10784.89559 10173.278 12106.76311 9033.108351 1.116639818 1.328757732 1.122818061 1.07006268 1.210768933 1.208694664 1.193929616 1.126221186 1.340265459 1 13.1410068 -10.83272175 3.416273487 0.999199635 1.188697862 0.315665117 0.084269824 29728219.25 43523652.44 250388.6758 0.020446616 1.47E-11 10.83272175 0.189498227 NQS(ph)PVLEPVGR ddPTM_A459_MK2206_30min_R1 2 NQSPVLEPVGR 11 0 B4DG22;B1AXG1;B7ZB17;P51812;A0A2R8Y603 B4DG22 RPS6KA3 Ribosomal protein S6 kinase alpha-3 1 NQS(1)PVLEPVGR;NQS(1)PVLEPVGR 164.22 0.00064843 68665000 6105.2 6694.2 7637.3 5307.3 6579.7 5338.7 6225 5772.6 5220.2 5072.6 TRUE FALSE 5585.92068 6258.406363 7118.901355 5716.069166 6317.616616 5640.97258 5809.741608 5722.130767 5762.858471 5701.031984 0.97980869 1.097767278 1.248703985 1.002637624 1.108153161 0.98946517 1.019068412 1.003700871 1.010844789 1 12.47700738 -6.761289869 24.99999976 1.005750431 1.092240068 0.270284286 0.067779017 5.581746482 933356.1116 0.023503342 0.022111135 1.73E-07 6.761289869 0.086489637 NQS(ph)PVLEPVGR ddPTM_A459_MK2206_30min_R2 4 NQSPVLEPVGR 11 0 B4DG22;B1AXG1;B7ZB17;P51812;A0A2R8Y603 B4DG22 RPS6KA3 Ribosomal protein S6 kinase alpha-3 1 NQS(1)PVLEPVGR;NQS(1)PVLEPVGR;NQS(1)PVLEPVGR;NQS(1)PVLEPVGR 138.31 0.0012616 116807000 309957 386471 326349 382589 348198 306186 383172 303833 301021 293512 TRUE FALSE 333687.5462 367279.4121 337229.3128 351330.2549 334525.997 317838.1228 332861.0561 343545.0163 327203.2625 283934.7275 1.175226254 1.293534663 1.18770013 1.237362749 1.178179224 1.119405596 1.172315409 1.209943635 1.15238902 1 18.11519979 -14.52287875 0.150194055 0.304729369 1.253241349 0.685810954 0.041002353 78.71458265 0.699185153 16.29327784 0.21153653 3.00E-15 14.52287875 0.94851198 NQSFCPT(ph)VNLDK ddPTM_A459_MK2206_30min_R2 1 NQSFCPTVNLDK 12 0 P46776;E9PLL6;E9PJD9 P46776 RPL27A 60S ribosomal protein L27a 1 NQS(0.007)FCPT(0.993)VNLDK 122.64 0.0081682 4515000 23185 32210 27846 29609 25913 34147 46444 46860 36464 32360 TRUE FALSE 24960.06143 30610.49824 28774.37174 27189.84999 24895.52542 35446.48801 40345.84701 52984.76289 39635.57281 31304.09585 0.797341714 0.977843231 0.919188718 0.868571644 0.79528013 1.132327481 1.288836043 1.692582439 1.266146545 1 14.93406381 -7.056279126 2.671230914 1.371516101 0.881110957 0.591952523 0.169517329 0.176281216 2.487953346 0.068708062 0.053077914 8.78E-08 7.056279126 -0.490405144 NQSLGQS(ph)APSLTAGLK ddPTM_A459_MK2206_30min_R2 5 NQSLGQSAPSLTAGLK 16 0 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 NQSLGQS(0.597)APS(0.391)LT(0.012)AGLK;NQS(0.009)LGQS(0.977)APS(0.014)LTAGLK;NQS(0.007)LGQS(0.992)APS(0.001)LTAGLK;NQSLGQS(0.992)APS(0.007)LT(0.001)AGLK;NQSLGQS(0.976)APS(0.023)LTAGLK 179.1 1.08E-06 69915800 318288.1 333508.9 325833.1 332074.7 357804.7 289365.4 403709.1 276015.9 281173.9 358514.1 TRUE FALSE 342656.4817 316947.333 336696.2129 304943.1348 343755.4897 300377.4031 350701.6102 312092.1258 305629.8976 346815.8143 0.988007085 0.913877972 0.970821396 0.879265369 0.991175937 0.866100653 1.011204206 0.89987859 0.881245563 1 18.40381016 -4.748273373 24.11162713 0.933098602 0.988007294 0.085491091 0.051885212 1003.48835 1837568.802 0.011840105 0.208832909 1.79E-05 4.748273373 0.054908692 NQSLGQSAPS(ph)LTAGLK ddPTM_A459_MK2206_30min_R1 1 NQSLGQSAPSLTAGLK 16 0 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 NQSLGQS(0.195)APS(0.804)LTAGLK 254.89 5.14E-30 29347000 2861.3 2741.1 2304.7 1896.7 2234.7 1933.5 2229.2 2250.4 2203.5 1990.5 TRUE FALSE 2617.93141 2562.653892 2148.263385 2042.784163 2145.687167 2042.973099 2080.494135 2230.72499 2432.56171 2237.098168 1.170235374 1.1455259 0.960290173 0.913140153 0.959138583 0.913224609 0.929996799 0.997151141 1.087373699 1 11.12741285 -5.242591516 5.566192075 0.963749294 1.16118874 0.699171965 0.049192985 0.093489122 10.08367037 0.013553896 0.034672803 5.72E-06 5.242591516 0.197439446 NQSPT(ph)EAEKPASSSLPSSPPPQLLTR ddPTM_A459_MK2206_30min_R1 1 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 1 NQS(0.044)PT(0.95)EAEKPAS(0.001)S(0.004)S(0.001)LPSSPPPQLLTR 100.14 2.80E-06 16235000 1717.1 1738 1547.8 1422.7 1453.6 1398.6 1343.9 1463.1 1463.3 1371.4 TRUE FALSE 1571.051628 1624.855884 1442.739648 1532.276601 1395.700034 1477.787523 1254.250883 1450.308271 1615.415271 1541.299386 1.019303351 1.054211725 0.936054125 0.994145988 0.905534672 0.958793299 0.813762008 0.940964672 1.048086625 1 10.58993141 -5.265415475 24.49491949 0.94304374 1.036757543 0.247026356 0.059933867 307.1020175 1891936.81 0.015895784 0.035240076 5.43E-06 5.265415475 0.093713802 NQSPT(ph)EAEKPASSSLPSSPPPQLLTR ddPTM_A459_MK2206_30min_R2 3 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 1 NQS(0.012)PT(0.982)EAEKPAS(0.002)S(0.002)S(0.001)LPSSPPPQLLTR;NQS(0.031)PT(0.956)EAEKPAS(0.004)S(0.007)S(0.001)LPSSPPPQLLTR;NQS(0.199)PT(0.799)EAEKPAS(0.001)S(0.001)SLPSSPPPQLLTR 101.41 2.00E-06 161819500 41828.5 46584.8 41029.7 47256.1 41762 33429.8 52499.9 44113.5 38029.7 50170 TRUE FALSE 45030.92212 44271.46657 42397.60972 43395.12547 40122.21404 34701.99446 45606.60007 49879.28591 41337.45456 48532.95701 0.927842128 0.912193884 0.873583897 0.894137265 0.826700381 0.715019166 0.939703716 1.027740508 0.851739871 1 15.56667714 -10.52980016 5.153231384 1.000000876 0.885148861 0.165581877 0.077171106 8.36E-07 1.61E-07 0.080419639 0.019504479 2.95E-11 10.52980016 -0.114852015 NQSPTEAEKPASSSLPS(ph)SPPPQLLTR ddPTM_A459_MK2206_30min_R1 4 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 1 NQSPTEAEKPASS(0.001)S(0.001)LPS(0.499)S(0.499)PPPQLLTR;NQSPTEAEKPAS(0.001)S(0.009)S(0.026)LPS(0.482)S(0.482)PPPQLLTR;NQSPT(0.009)EAEKPAS(0.012)S(0.315)S(0.009)LPS(0.328)S(0.328)PPPQLLTR;NQS(0.003)PT(0.05)EAEKPAS(0.027)S(0.072)S(0.029)LPS(0.41)S(0.41)PPPQLLTR 119.35 4.26E-09 128809000 11951.1 12146.8 11721.8 11816.1 10258.8 9683.6 10486.2 11281.8 10549.1 10280.1 TRUE FALSE 10934.59619 11356.04111 10926.15687 12726.17807 9850.170273 10231.87706 9786.684731 11183.16441 11645.7167 11553.6764 0.946417037 0.982894165 0.945686593 1.101482994 0.852557224 0.885594915 0.847062389 0.967931248 1.007966321 1 13.49606437 -4.42600267 14.40133924 0.950092521 0.855319649 0 0.073797745 11819690.57 27127369.63 0.019251286 35156911.03 3.75E-05 4.42600267 -0.094772872 NQSPTEAEKPASSSLPS(ph)SPPPQLLTR ddPTM_A459_MK2206_30min_R2 4 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 1 NQSPTEAEKPASSSLPS(0.499)S(0.499)PPPQLLT(0.002)R;NQSPTEAEKPAS(0.018)S(0.055)S(0.076)LPS(0.425)S(0.425)PPPQLLT(0.001)R;NQSPTEAEKPASS(0.005)S(0.004)LPS(0.495)S(0.495)PPPQLLTR;NQSPTEAEKPASSS(0.001)LPS(0.498)S(0.498)PPPQLLT(0.002)R 119.69 4.25E-09 169836000 190609 214512 213845 210053 204684 176212 229748 173748 175073 210939 TRUE FALSE 205202.1716 203859.646 220974.4856 192890.998 196647.0777 182917.8711 199581.8116 196457.4602 190300.5331 204056.0777 1.005616563 0.999037364 1.082910581 0.945284258 0.963691353 0.896409816 0.978073351 0.962762111 0.93258939 1 17.63860616 -5.790032027 24.97987524 0.951556949 1.026173112 0.513560809 0.033378192 156.0034477 136291.4033 0.009178653 0.013617162 1.62E-06 5.790032027 0.074616163 NQSPTEAEKPASSSLPSS(ph)PPPQLLTR ddPTM_A459_MK2206_30min_R1 1 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 1 NQS(0.01)PT(0.007)EAEKPAS(0.001)S(0.014)S(0.005)LPS(0.222)S(0.736)PPPQLLT(0.005)R 73.685 0.009958 0 1918.7 1828.8 1777 1654.3 1406.1 1495.7 1574.9 1926.2 1491.7 1443.5 TRUE FALSE 1755.50449 1709.744788 1656.382191 1781.714473 1350.09206 1580.385241 1469.841295 1909.359436 1646.767553 1622.331678 1.08208729 1.053881158 1.020988626 1.098243039 0.83219238 0.974144352 0.906005421 1.176922982 1.015062194 1 10.66385309 NQSQS(ph)QDALVLEDVEK ddPTM_A459_MK2206_30min_R1 3 NQSQSQDALVLEDVEK 16 0 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 NQS(0.064)QS(0.936)QDALVLEDVEK;NQSQS(1)QDALVLEDVEK;NQS(0.005)QS(0.995)QDALVLEDVEK 206.8 7.65E-08 12978500 5391.68 4362.33 3597.24 3355.3 4051.64 3896.52 4919.68 5287.58 6287.75 5794.59 TRUE FALSE 4933.089303 4078.341524 3353.069371 3613.725787 3890.254599 4117.137595 4591.497124 5241.351246 6941.384113 6512.467556 0.757483897 0.626235983 0.514869263 0.55489348 0.59735493 0.632193183 0.705031861 0.80481802 1.065860836 1 12.66898856 -7.938640149 1.625035733 1.040214457 0.607446661 0.858905706 0.06585559 0.139524898 0.669300025 0.05912737 0.020403355 1.15E-08 7.938640149 -0.432767796 NQSQS(ph)QDALVLEDVEK ddPTM_A459_MK2206_30min_R2 2 NQSQSQDALVLEDVEK 16 0 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 NQS(0.036)QS(0.964)QDALVLEDVEK;NQS(0.001)QS(0.999)QDALVLEDVEK 222.13 5.71E-11 9469000 68204 35925.2 38499 37769 35073 40708 77263 39803 52061 59032 TRUE FALSE 73425.75068 34141.20681 39782.53744 34683.15188 33695.85779 42257.17147 67118.27529 45005.38876 56589.17168 57105.79067 1.285784678 0.597858928 0.696646294 0.607349123 0.590060262 0.739980499 1.175332212 0.788105518 0.990953299 1 15.80134943 -7.133334661 10.07210489 0.970745191 0.728348428 0.22641237 0.209528653 0.590741074 45.14877801 0.079087181 0.061259285 7.36E-08 7.133334661 -0.242396763 NQSS(ph)EDILR ddPTM_A459_MK2206_30min_R2 2 NQSSEDILR 9 0 Q13625-2;Q13625;Q13625-3;H0Y847 Q13625-2 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 NQS(0.335)S(0.665)EDILR;NQS(0.468)S(0.532)EDILR 95.273 0.022522 19173700 60032 61290 54400 60406 62197 57686 76067 59543 51088 58152 TRUE FALSE 64628.09608 58246.42772 56213.66885 55470.63657 59754.83327 59881.28115 66079.31153 67325.47454 55531.54189 56254.505 1.14885192 1.035409124 0.999274082 0.986065677 1.062223075 1.064470857 1.17464924 1.196801475 0.987148352 1 15.77968102 -7.018442693 15.66585369 1.107980313 1.042143685 0.046979792 0.074439093 12.5029059 10618.52981 0.027995257 0.022363674 9.58E-08 7.018442693 -0.065836628 NQT(ph)YSFSPSK ddPTM_A459_MK2206_30min_R1 1 NQTYSFSPSK 10 0 Q86YS7-3;Q86YS7;H0YFE9 Q86YS7-3 C2CD5 C2 domain-containing protein 5 1 NQT(0.533)YS(0.19)FS(0.274)PS(0.002)K 142.89 0.0026879 15322000 5543.8 6109 6185.9 5347.3 4234.8 4037.9 5079.6 5290.3 6900.3 7337.7 TRUE FALSE 5072.270698 5711.30299 5766.018343 5759.149973 4066.118949 4266.522409 4740.749152 5244.047465 7617.610878 8246.749673 0.615063013 0.692552001 0.699186779 0.698353921 0.493057157 0.51735806 0.574862745 0.635892645 0.923710696 1 13.0096099 -8.307188688 3.377625116 0.994179864 0.612929982 0.807785619 0.068064771 0.112777043 2.463201057 0.072961721 0.020228956 4.93E-09 8.307188688 -0.381249881 NQTALDALHAQTVSQTAAS(ph)SPQDAYR ddPTM_A459_MK2206_30min_R2 1 NQTALDALHAQTVSQTAASSPQDAYR 26 0 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L "Histone-lysine N-methyltransferase, H3 lysine-79 specific" 1 NQTALDALHAQTVS(0.023)QT(0.346)AAS(0.482)S(0.147)PQDAY(0.002)R 70.637 0.00051737 3530600 12296 10743 10604 12285 13615 11682 14436 9925.8 12607 13864 TRUE FALSE 13237.39121 10209.51824 10957.53207 11281.2762 13080.40669 12126.5667 12540.53586 11223.13614 13703.53407 13411.61882 0.987009204 0.76124429 0.817017857 0.841156937 0.97530409 0.904183668 0.935050126 0.836821885 1.021765848 1 13.71119576 -6.244823234 23.628609 0.934771624 0.842681908 0.278876 0.072193417 534.1611768 759590.0004 0.020529921 0.026412806 5.69E-07 6.244823234 -0.092089716 NQTYS(ph)FSPSK ddPTM_A459_MK2206_30min_R1 1 NQTYSFSPSK 10 0 Q86YS7-3;Q86YS7;H0YFE9 Q86YS7-3 C2CD5 C2 domain-containing protein 5 1 NQT(0.075)YS(0.425)FS(0.425)PS(0.075)K 105.65 0.012382 11461000 4509.6 5309.5 5587.8 5148.2 4501.2 4726 6389.3 7961.8 6294.1 5581.3 TRUE FALSE 4126.034839 4963.850585 5208.515705 5544.715256 4321.907673 4993.582036 5963.081455 7892.190822 6948.394219 6272.753581 0.657770911 0.79133518 0.830339601 0.883936406 0.688996884 0.796074957 0.950632187 1.258170072 1.107710375 1 12.61488317 -7.487272462 3.38972056 1.13652114 0.780416657 0.765772681 0.085867119 0.1103021 2.597004846 0.041467855 0.02466287 3.26E-08 7.487272462 -0.356104483 NQTYSFS(ph)PSK ddPTM_A459_MK2206_30min_R1 1 NQTYSFSPSK 10 0 Q86YS7-3;Q86YS7;H0YFE9 Q86YS7-3 C2CD5 C2 domain-containing protein 5 1 NQTYS(0.009)FS(0.592)PS(0.399)K 99.669 0.018247 23248000 4363.8 4520.8 4776.4 4002.3 3571.4 2911.1 3973.4 4791.7 5423.5 5973.2 TRUE FALSE 3992.635895 4226.495098 4452.191276 4310.557839 3429.143575 3075.923966 3708.341736 4749.806672 5987.292233 6713.205111 0.594743618 0.629579318 0.663199054 0.642101316 0.510805721 0.458190077 0.552395119 0.707531886 0.891867913 1 12.71278601 -8.229205198 2.065128682 0.990369313 0.579632589 0.856557436 0.060056838 0.129319307 0.99797228 0.064990307 0.019171415 5.90E-09 8.229205198 -0.410736724 NQTYSFS(ph)PSK ddPTM_A459_MK2206_30min_R2 4 NQTYSFSPSK 10 0 Q86YS7-3;Q86YS7;H0YFE9 Q86YS7-3 C2CD5 C2 domain-containing protein 5 1 NQTYS(0.205)FS(0.79)PS(0.005)K;NQTYS(0.078)FS(0.919)PS(0.003)K;NQTYS(0.193)FS(0.803)PS(0.005)K;NQTYS(0.009)FS(0.99)PS(0.001)K 183.06 0.00015839 148454000 883065 836089 904749 758684 789114 613541 1153370 790887 768352 1060987 TRUE FALSE 950673.1354 794570.036 934912.8801 696697.0903 758129.4194 636889.7327 1001931.134 894258.6464 835181.8681 1026367.081 0.92625061 0.774157756 0.910895232 0.678799138 0.738653288 0.620528215 0.976191805 0.871285394 0.813726281 1 19.96911537 -8.693044144 0.716725316 0.99465177 0.79050548 0.227389144 0.106295629 1.433017567 1.570935696 0.110437626 0.04145701 2.03E-09 8.693044144 -0.20414629 NQVAMNPT(ph)NTVFDAK ddPTM_A459_MK2206_30min_R2 1 NQVAMNPTNTVFDAK 15 0 P11142;E9PKE3;P11142-2;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PNE6;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 NQVAMNPT(0.524)NT(0.476)VFDAK 130.47 0.0017653 0 10693 9561.2 9574.4 12207 8172.5 8212.1 11016 8793.4 8888.5 9691.7 TRUE FALSE 11511.6643 9086.404711 9893.605717 11209.64905 7851.606586 8524.61722 9569.585967 9942.727572 9661.605663 9375.460623 1.227850531 0.969168884 1.055266095 1.195637154 0.837463555 0.909247829 1.020705686 1.060505502 1.030520638 1 13.19467386 -4.754880073 24.98493763 1.009824117 1.227850901 0.347064395 0.090155389 276.1860768 1051918.186 0.023659967 0.221152039 1.76E-05 4.754880073 0.218026784 NQVAMNPTNTVFDAK ddPTM_A459_MK2206_30min_R1 1 NQVAMNPTNTVFDAK 15 0 P11142;E9PKE3;P11142-2;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PNE6;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 167.73 0.010475 14727000 2046.4 2302.4 2032 1906.7 1687.2 1703 1723.9 1775.4 1727.1 1695.9 FALSE TRUE 1872.342934 2152.513342 1894.073501 2053.554364 1619.995251 1799.422388 1608.901776 1759.877865 1906.638225 1906.000895 0.982341057 1.129334906 0.993742189 1.077415215 0.849944643 0.944082656 0.844124355 0.923335277 1.000334381 1 10.89633308 -6.249995105 24.81647933 0.91985031 1.047969805 0.463071812 0.062335639 553.9075929 1201127.22 0.017697229 0.02264474 5.62E-07 6.249995105 0.128119495 NQVEEDAEDS(ph)GEADDEEKPEIHKPGQNSFSK ddPTM_A459_MK2206_30min_R1 1 NQVEEDAEDSGEADDEEKPEIHKPGQNSFSK 31 2 O75717;O75717-2 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 NQVEEDAEDS(1)GEADDEEKPEIHKPGQNSFSK 60.829 0.00061941 7434400 656.5 488.66 710.53 546.05 405.39 303.93 501.79 437.22 479.05 592.07 TRUE FALSE 600.6612276 456.8481452 662.3012032 588.1068656 389.2424579 321.1382539 468.3165047 433.3974316 528.8489618 665.4201015 0.902679715 0.686555973 0.995312888 0.883812894 0.584957468 0.482609788 0.703790739 0.651314005 0.794759522 1 9.378121639 -6.247844951 24.50655983 0.674500455 0.863353822 0.215817583 0.14740539 826.5607683 1490032.587 0.042965207 0.05513655 5.65E-07 6.247844951 0.188853367 NQVEEDAEDS(ph)GEADDEEKPEIHKPGQNSFSK ddPTM_A459_MK2206_30min_R2 2 NQVEEDAEDSGEADDEEKPEIHKPGQNSFSK 31 2 O75717;O75717-2 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 NQVEEDAEDS(0.984)GEADDEEKPEIHKPGQNS(0.012)FS(0.003)K;NQVEEDAEDS(1)GEADDEEKPEIHKPGQNSFSK 88.481 3.54E-07 32639000 44665.1 54795 50513.9 55315 61760 40726 76054 46444.9 43869.1 61328.7 TRUE FALSE 48084.6944 52073.95998 52198.00821 50795.58756 59334.99208 42275.85647 66068.01844 52515.4079 47684.75502 59327.54954 0.810495204 0.877736572 0.879827477 0.856188869 1.000125448 0.712583897 1.113614484 0.885177431 0.803753996 1 15.85641457 -14.52287875 0.015084658 2.060623184 3.78E-13 0.105668699 0.103910382 13960.26755 15.91431849 1363.356454 863.4383352 3.00E-15 14.52287875 -2.060623184 NQVVSS(ph)TNGELNTDDPTAGR ddPTM_A459_MK2206_30min_R1 2 NQVVSSTNGELNTDDPTAGR 20 0 H0YBN6;Q9Y6M4-6;Q9Y6M4-5;Q9Y6M4-3;Q9Y6M4-4 H0YBN6 CSNK1G3 Casein kinase I isoform gamma-3 1 NQVVS(0.001)S(0.934)T(0.065)NGELNTDDPTAGR;NQVVS(0.002)S(0.921)T(0.077)NGELNTDDPTAGR 372.59 4.58E-241 19777100 4904.4 5232.9 3837.7 3632.5 5009.3 4738.7 6119.6 5607.7 6983.1 6620.4 TRUE FALSE 4487.255026 4892.237259 3577.207616 3912.275779 4809.768974 5007.001099 5711.37265 5558.67247 7709.018234 7440.585133 0.603078245 0.65750706 0.480769664 0.525802166 0.646423485 0.672931095 0.767597245 0.747074641 1.036076881 1 12.86120037 -7.800914665 0.846259971 1.026737865 0.573453162 0.856402665 0.065750436 0.218143008 0.290742418 0.061451028 0.026451162 1.58E-08 7.800914665 -0.453284703 NQVVSS(ph)TNGELNTDDPTAGR ddPTM_A459_MK2206_30min_R2 1 NQVVSSTNGELNTDDPTAGR 20 0 H0YBN6;Q9Y6M4-6;Q9Y6M4-5;Q9Y6M4-3;Q9Y6M4-4 H0YBN6 CSNK1G3 Casein kinase I isoform gamma-3 1 NQVVS(0.003)S(0.904)T(0.093)NGELNTDDPTAGR 275.31 2.89E-132 0 8840.6 5849.1 8815.5 7058.6 8013.8 6924.7 10457 5861.7 10698 9636.6 TRUE FALSE 9517.443133 5558.642199 9109.40437 6481.889801 7699.137946 7188.224311 9083.983339 6627.844316 11628.4927 9322.158531 1.020948432 0.596282737 0.977177586 0.695320701 0.825896483 0.771090117 0.974450639 0.71097743 1.247403449 1 13.18644833 -8.259601706 24.99873803 1.123701732 0.81855502 0.422628223 0.141245654 134.0140884 1823124.471 0.096922333 0.032305674 5.50E-09 8.259601706 -0.305146712 NQYDNDVTVWS(ph)PQGR ddPTM_A459_MK2206_30min_R1 2 NQYDNDVTVWSPQGR 15 0 B4DEV8;P25786;P25786-2 B4DEV8 PSMA1 Proteasome subunit alpha type;Proteasome subunit alpha type-1 1 NQYDNDVTVWS(1)PQGR;NQYDNDVTVWS(1)PQGR 239.33 4.86E-20 10974200 2079.55 2206.94 2378.9 1701.91 2246.76 2074.49 2078.82 2116.33 2036.03 1642.78 TRUE FALSE 1902.673352 2063.267805 2217.426896 1832.991403 2157.266792 2191.945831 1940.145711 2097.82715 2247.682605 1846.299989 1.030533155 1.117514931 1.201011163 0.992791753 1.168427019 1.187210012 1.050829076 1.136233095 1.217398374 1 10.85042127 -4.766582675 5.974599886 1.123710641 1.027330373 0.105001921 0.076618281 0.283090929 38.54996188 0.018232812 0.111446947 1.71E-05 4.766582675 -0.096380268 NQYDNDVTVWS(ph)PQGR ddPTM_A459_MK2206_30min_R2 1 NQYDNDVTVWSPQGR 15 0 B4DEV8;P25786;P25786-2 B4DEV8 PSMA1 Proteasome subunit alpha type;Proteasome subunit alpha type-1 1 NQYDNDVTVWS(1)PQGR 154.47 0.0001876 5556300 25064 32738 25573 28874 29119 28047 32198 22244 26435 27488 TRUE FALSE 26982.91911 31112.27853 26425.59106 26514.90184 27975.64175 29114.34824 27970.36392 25151.36718 28734.26852 26591.06881 1.014736162 1.170027378 0.993776942 0.997135618 1.052069097 1.09489199 1.051870616 0.9458577 1.080598479 1 14.69865415 -1.522878745 0.105715031 0.982718473 1.246195824 0.058126233 0.058977395 323.069086 2.409098513 0.633667923 12.37729495 0.03 1.522878745 0.263477351 NQYDNDVTVWSPQGR ddPTM_A459_MK2206_30min_R2 2 NQYDNDVTVWSPQGR 15 0 B4DEV8;P25786;P25786-2 B4DEV8 PSMA1 Proteasome subunit alpha type;Proteasome subunit alpha type-1 0 ; 187.74 0.00033382 11184300 23125.1 26219 26600.4 31664 26495 22562 29759 19259.3 25144 27639 FALSE TRUE 24895.57544 24917.00259 27487.24406 29076.94991 25454.67317 23420.61272 25851.60755 21776.55664 27330.97967 26737.14169 0.931123294 0.931924694 1.028054695 1.087511532 0.952034195 0.875957983 0.96688 0.814468386 1.022210227 1 14.70655762 -6.51448661 24.89610787 0.924882793 0.995960486 0.126864677 0.070128485 666.7326226 1977935.082 0.022538719 0.023610879 3.06E-07 6.51448661 0.071077693 NRAEASLER ddPTM_A459_MK2206_30min_R2 1 NRAEASLER 9 1 A0A590UK93;A0A590UKC5;M0QZS6;B3KNJ4;Q9UBE0-2;Q9UBE0-3;Q9UBE0;M0R286;A0A590UKA0;M0QYM8;M0R054;M0QX65 A0A590UK93 SAE1 "SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed" 0 107.21 0.035855 2181200 3681.9 7048 5659.1 10110 8883.7 7511.3 6830.6 7031.2 8983.7 7721.9 FALSE TRUE 3963.789095 6698.006569 5847.77157 9283.98066 8534.881301 7797.147785 5933.734015 7950.201982 9765.085987 7469.935035 0.530632338 0.896661957 0.782841021 1.242846238 1.142564328 1.043803962 0.794348811 1.064293323 1.307251795 1 12.86687998 -4.550204761 1.025076737 1.067318386 0.070034487 0.533052507 0.152246973 2.34514507 1.460683441 0.051318493 2.871045461 2.82E-05 4.550204761 -0.997283899 NREEEWDPEYT(ph)PK ddPTM_A459_MK2206_30min_R1 2 NREEEWDPEYTPK 13 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 NREEEWDPEYT(1)PK;NREEEWDPEYT(1)PK 139.77 0.0049818 51142800 5967.7 6352.9 5548.5 5190.8 5054.3 4873.7 5646 5024.4 4994.6 4939.8 TRUE FALSE 5460.115777 5939.325055 5171.883279 5590.596315 4852.976528 5149.644682 5269.365642 4980.472201 5513.806543 5551.779718 0.983489269 1.069805604 0.931572134 1.00699174 0.874129878 0.927566464 0.949130893 0.897094707 0.99316018 1 12.43873461 -5.275448386 24.9502665 0.942637557 1.026647438 0.320613997 0.045682493 694.3500806 1236648.768 0.011408525 0.023937253 5.30E-06 5.275448386 0.084009881 NREEEWDPEYT(ph)PK ddPTM_A459_MK2206_30min_R2 2 NREEEWDPEYTPK 13 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 NREEEWDPEYT(1)PK;NREEEWDPEYT(1)PK 117.2 0.0050713 62449000 155175 148728 141294 120639 130699 94724 149777 114962 109858 142638 TRUE FALSE 167055.3173 141342.3838 146004.6714 110782.4078 125567.1006 98328.7882 130111.1 129987.9281 119413.2503 137983.7337 1.210688483 1.024340913 1.058129589 0.802865706 0.91001379 0.712611447 0.942945204 0.942052549 0.865415415 1 17.07413868 -5.126303087 1.271285185 0.878613889 1.228107018 0.564416566 0.087170717 0.587874239 1.250455834 0.02667486 0.228877533 7.48E-06 5.126303087 0.349493129 NREELDKYWSQQIEESTTVVTTQSAEVGAAETTLTELR ddPTM_A459_MK2206_30min_R1 1 NREELDKYWSQQIEESTTVVTTQSAEVGAAETTLTELR 38 2 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 61.116 8.11E-05 5207800 269.63 392.94 337.21 272.71 308.95 330.74 590.73 298.01 470.15 357.22 FALSE TRUE 246.6965526 367.3595346 314.3211247 293.7141715 296.6438673 349.466213 551.3234795 295.40453 519.0237749 401.4751105 0.614475334 0.915024431 0.782915594 0.731587498 0.738884826 0.870455487 1.373244481 0.735797867 1.29279191 1 8.64916674 -7.013980373 23.32420879 1.084642946 0.769376467 0.463850181 0.174132966 248.1528453 414006.3959 0.060166424 0.048644287 9.68E-08 7.013980373 -0.315266479 NRENS(ph)PSSQSAGLSSINK ddPTM_A459_MK2206_30min_R1 1 NRENSPSSQSAGLSSINK 18 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2 H3BSS6 ZNF106 Zinc finger protein 106 1 NRENS(0.966)PS(0.027)S(0.006)QS(0.001)AGLSSINK 145.48 0.00049844 0 554 676.82 480.73 547.63 478.92 435.14 444.2 545.09 419.64 195.27 TRUE FALSE 506.8793908 632.758895 448.099387 589.8085575 459.8436023 459.7772508 414.5682285 540.3243356 463.2630797 219.4615218 2.309650396 2.88323388 2.041812994 2.687526053 2.095326773 2.095024435 1.889024668 2.46204588 2.110907989 1 7.777824204 -10.97037523 0.240111234 1.92E-13 2.520094595 0.673670492 0.277438473 13.25755384 0.602671535 9.041879857 0.49855995 1.07E-11 10.97037523 2.520094595 NRENS(ph)PSSQSAGLSSINK ddPTM_A459_MK2206_30min_R2 2 NRENSPSSQSAGLSSINK 18 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2 H3BSS6 ZNF106 Zinc finger protein 106 1 NRENS(0.991)PS(0.007)S(0.001)QS(0.001)AGLSSINK;NRENS(0.976)PS(0.023)SQSAGLSSINK 92.151 0.024208 21290200 40233 43915 45338 47853 43558 37408 49856 32810 34046 46716 TRUE FALSE 43313.26941 41734.24496 46849.54629 43943.25683 41847.69406 38831.58765 43309.84731 37098.37965 37007.25954 45191.66075 0.958435001 0.923494385 1.036685652 0.972375348 0.926004784 0.859264453 0.958359277 0.820912067 0.818895764 1 15.46376896 -6.46850354 3.312375452 0.884540022 0.973397212 0.292497749 0.058837753 0.302990253 6.62107876 0.019593547 0.02158436 3.40E-07 6.46850354 0.088857189 NRENS(ph)SPCQGNGEQAGR ddPTM_A459_MK2206_30min_R1 1 NRENSSPCQGNGEQAGR 17 1 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 1 NRENS(0.5)S(0.5)PCQGNGEQAGR 66.467 0.022593 1784800 0 0 0 61.087 66.349 0 70.57 0 132.79 0 TRUE FALSE 0 0 0 65.79193132 63.70617883 0 65.86240406 0 146.5939957 0 0 NRENS(ph)SPCQGNGEQAGR ddPTM_A459_MK2206_30min_R2 1 NRENSSPCQGNGEQAGR 17 1 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 1 NRENS(0.82)S(0.18)PCQGNGEQAGR 79.383 0.0097595 3556500 1347.1 2102.5 935.01 2708.2 2254.9 2415.4 3517.7 2650 2230.2 2404.6 TRUE FALSE 1450.235012 1998.092907 966.1827667 2486.931397 2166.361296 2507.31974 3055.821764 2996.364099 2424.178765 2326.138099 0.623451812 0.858974327 0.41535916 1.069124571 0.931312417 1.07788946 1.313688885 1.288128207 1.042147397 1 11.18372103 -6.174412062 1.357495285 1.169562484 0.660266242 0.599830782 0.165903152 0.281077901 1.04591511 0.06154601 0.094024653 6.69E-07 6.174412062 -0.509296242 NRENSS(ph)PCQGNGEQAGR ddPTM_A459_MK2206_30min_R1 1 NRENSSPCQGNGEQAGR 17 1 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 1 NRENS(0.067)S(0.933)PCQGNGEQAGR 64.476 0.025101 1628800 313.45 193.54 208.17 404.7 273.18 258.33 313.72 203.06 119.18 74.57 TRUE FALSE 286.7894315 180.9405108 194.0400004 435.8700641 262.2986621 272.9564214 292.7923112 201.2846678 131.5691875 83.80829457 3.421969543 2.158980943 2.315283963 5.200798636 3.12974585 3.25691416 3.493595863 2.401727285 1.569882649 1 6.389021131 -8.177523991 1.909827977 1.063594638 3.272391077 0.513911963 0.77970115 0.295939208 1.932515127 0.751234122 0.22748567 6.64E-09 8.177523991 2.208796439 NRENSS(ph)PCQGNGEQAGR ddPTM_A459_MK2206_30min_R2 1 NRENSSPCQGNGEQAGR 17 1 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 1 NRENS(0.067)S(0.933)PCQGNGEQAGR 131.98 0.00040831 4449500 4379.1 5119.2 4232.2 5676.3 5353.3 5159.6 4560.5 3147 4170.9 3331.8 TRUE FALSE 4714.367263 4864.987972 4373.299436 5212.528132 5143.102544 5355.952194 3961.700872 3558.323705 4533.677343 3223.083639 1.462688466 1.509420331 1.356868119 1.617248795 1.595708682 1.661747815 1.229164774 1.104012214 1.406627271 1 11.65422591 -7.349661779 6.273469719 1.188733903 1.530841102 0.653690918 0.12459837 0.158638765 9.29188608 0.052673932 0.035253975 4.47E-08 7.349661779 0.3421072 NREPVQLETLSIR ddPTM_A459_MK2206_30min_R2 1 NREPVQLETLSIR 13 1 J3QLI9;P62314 J3QLI9 SNRPD1 Small nuclear ribonucleoprotein Sm D1 0 174.21 0.00036484 5404600 12260 14992 15212 16334 15336 14438 16551 11839 13126 15389 FALSE TRUE 13198.63503 14247.51908 15719.16049 14999.45995 14733.83158 14987.44821 14377.83382 13386.39795 14267.67575 14886.85819 0.88659641 0.957053456 1.055908526 1.007563836 0.989720692 1.006756967 0.965807132 0.899209073 0.958407447 1 13.86175169 -9.524906388 9.317085293 1 0.972443832 0.032085529 0.047840036 0 0 0.050117887 0.012155373 2.99E-10 9.524906388 -0.027556168 NRHS(ph)PDHPGMGSSQASSSSSLR ddPTM_A459_MK2206_30min_R2 7 NRHSPDHPGMGSSQASSSSSLR 22 1 J3KR33;A0JLT2 J3KR33 MED19 Mediator of RNA polymerase II transcription subunit 19 1 NRHS(1)PDHPGMGSSQASSSSSLR;NRHS(1)PDHPGMGSSQASSSSSLR;NRHS(0.991)PDHPGMGS(0.006)S(0.003)QASSSSSLR;NRHS(0.999)PDHPGMGS(0.001)SQASSSSSLR;NRHS(0.837)PDHPGMGS(0.11)S(0.049)QAS(0.001)S(0.001)S(0.001)S(0.001)S(0.001)LR;NRHS(1)PDHPGMGSSQASSSSSLR;NRHS(1)PDHPGMGSSQASSSSSLR 107.57 2.48E-05 46488600 18875.25 37982.2 26233.07 49331.25 44090.91 57252 49147.2 34389.2 39519.2 32807.18 TRUE FALSE 20320.35365 36096.05918 27107.66746 45300.72907 42359.67933 59430.76498 42694.1136 38883.98652 42956.50858 31736.6844 0.640279665 1.13736075 0.85414302 1.427393249 1.334722897 1.872620474 1.345260679 1.225206327 1.353528555 1 14.95386379 -5.76254819 24.99753348 1.393916996 0.903271029 0.473673957 0.234049199 25.03992997 564536.3582 0.06482717 0.102621761 1.73E-06 5.76254819 -0.490645968 NRNEQESAVHPR ddPTM_A459_MK2206_30min_R1 2 NRNEQESAVHPR 12 1 H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-6 H0Y5J4;B4DDD6 DBNL Drebrin-like protein 0 ; 95.417 0.014381 1813160 1240.38 962.41 1110.08 1051.16 1382.18 1174.25 1189.29 1563.88 139.47 539.05 FALSE TRUE 1134.879168 899.7569341 1034.730862 1132.120525 1327.124844 1240.73502 1109.954634 1550.207162 153.9684056 605.8315836 1.873258506 1.485160164 1.707951336 1.868705026 2.190583785 2.047986691 1.83211748 2.558808758 0.254143907 1 9.242772981 -8.26843423 24.99998537 0.627071845 1.927540662 0.731543196 0.31934049 305.6768352 1092490.815 0.28649921 0.080335019 5.39E-09 8.26843423 1.300468817 NRNEQESAVHPR ddPTM_A459_MK2206_30min_R2 4 NRNEQESAVHPR 12 1 H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-6 H0Y5J4;B4DDD6 DBNL Drebrin-like protein 0 ;;; 117.95 0.0036967 5048950 9581.5 21198.4 15116.6 21317.3 21912.1 22844.7 24058.3 15827.5 20819.3 14352.8 FALSE TRUE 10315.06701 20145.71828 15620.5799 19575.6084 21051.72085 23714.07107 20899.41631 17896.20859 22630.12508 13884.46931 0.742921229 1.450953424 1.125039751 1.409892446 1.516206373 1.707956605 1.505236955 1.288937171 1.629887652 1 13.76118442 -4.498737829 2.06555364 1.429804294 7.99E-33 0.458033768 0.210275481 1.926002996 4.335047941 0.054923935 6.860786066 3.17E-05 4.498737829 -1.429804294 NRPDYVS(ph)EEEEDDEDFETAVK ddPTM_A459_MK2206_30min_R1 2 NRPDYVSEEEEDDEDFETAVK 21 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NRPDY(0.063)VS(0.937)EEEEDDEDFETAVK;NRPDY(0.001)VS(0.999)EEEEDDEDFETAVK 119.2 4.11E-05 128474000 6606 6889.1 6437.4 5451.1 5660.7 4881.9 5827.3 6460.2 5936.1 5610.6 TRUE FALSE 6044.125011 6440.618338 6000.447224 5870.944667 5435.222332 5158.308959 5438.57145 6403.719152 6553.178838 6305.683486 0.958520202 1.021398926 0.951593469 0.931056035 0.861956098 0.818041212 0.862487225 1.015547191 1.039249568 1 12.62243704 -7.812016116 10.86931213 1.020810389 0.915375109 0.422451892 0.05530331 0.658040924 137.8210637 0.03572641 0.017175758 1.54E-08 7.812016116 -0.10543528 NRPDYVS(ph)EEEEDDEDFETAVK ddPTM_A459_MK2206_30min_R2 3 NRPDYVSEEEEDDEDFETAVK 21 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NRPDY(0.001)VS(0.999)EEEEDDEDFETAVK;NRPDY(0.005)VS(0.995)EEEEDDEDFETAVK;NRPDY(0.103)VS(0.897)EEEEDDEDFETAVK 99.859 0.00015864 50860000 56458.8 63959.3 60991.9 60070.5 55663.7 50725 72478.1 49261.5 48856.6 65205.6 TRUE FALSE 60781.32914 60783.17417 63025.3395 55162.54799 53478.06345 52655.37542 62961.63841 55700.14719 53106.05876 63077.94661 0.963590802 0.963620052 0.999165998 0.874514009 0.8478092 0.834766796 0.998156119 0.883036785 0.84191166 1 15.94484808 -5.764633643 24.99988602 0.89184802 0.974275066 0.284152515 0.05649331 100.51639 786700.2272 0.01580261 0.0245875 1.72E-06 5.764633643 0.082427046 NRPDYVS(ph)EEEEDDEDFETAVKK ddPTM_A459_MK2206_30min_R1 1 NRPDYVSEEEEDDEDFETAVKK 22 2 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NRPDY(0.054)VS(0.915)EEEEDDEDFET(0.032)AVKK 78.206 0.001657 7439000 560.91 471.16 455.48 649.87 444.74 233.57 426.06 431.38 466.76 426.86 TRUE FALSE 513.201659 440.4873984 424.5632866 699.9231 427.025064 246.7945316 397.6383148 427.6084901 515.2813723 479.7426394 1.069743685 0.918174376 0.884981346 1.45895537 0.8901128 0.514431095 0.828857563 0.891328923 1.074078745 1 8.906116861 -6.501771911 24.9742787 0.83615661 1.071736765 0.215388659 0.199613973 1184.602429 1401661.152 0.064645212 0.072539353 3.15E-07 6.501771911 0.235580154 NRPEDYQGGR ddPTM_A459_MK2206_30min_R1 3 NRPEDYQGGR 10 1 Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 Q15084-3 PDIA6 Protein disulfide-isomerase A6 0 ;; 140.17 0.0040789 6577200 4530.2 5436.73 5118.62 4136.58 4418.08 3687.96 4957 4648.37 1810.26 4072.04 FALSE TRUE 4144.882701 5082.797889 4771.182336 4455.180108 4242.098518 3896.769108 4626.327575 4607.729791 1998.443005 4576.515058 0.905685363 1.110626279 1.042536138 0.97348748 0.926927687 0.851470837 1.010884377 1.006820634 0.436673534 1 12.16003371 -8.186600673 24.99995873 0.71831527 0.980041939 0.344385099 0.143603036 116.4320387 38893.83628 0.09052846 0.034216531 6.51E-09 8.186600673 0.261726669 NRPEDYQGGR ddPTM_A459_MK2206_30min_R2 4 NRPEDYQGGR 10 1 Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 Q15084-3 PDIA6 Protein disulfide-isomerase A6 0 ;;; 122.96 0.012122 55382400 43547.2 48543.3 42711.3 47199.8 44901.9 42757.3 45484.3 38125.4 40840.9 43243.7 FALSE TRUE 46881.20711 46132.71031 44135.27342 43343.42536 43138.82579 44384.45901 39512.15677 43108.52068 44393.16766 41832.66161 1.1206843 1.102791659 1.055043397 1.036114454 1.03122355 1.061000121 0.944528874 1.030499113 1.061208299 1 15.35234217 -5.079965221 0.790557128 1.017432717 1.16273154 0.568761969 0.03099763 1.376579983 0.880950937 0.012881868 0.163078637 8.32E-06 5.079965221 0.145298823 NRPEPHSDENGSTT(ph)PK ddPTM_A459_MK2206_30min_R1 1 NRPEPHSDENGSTTPK 16 1 Q03701;C9J9W7 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 NRPEPHSDENGS(0.055)T(0.247)T(0.698)PK 85.054 0.022988 1902400 811.8 881.84 1055 756.55 995.27 793.48 934.21 778.3 779.01 762.87 TRUE FALSE 742.7521471 824.4320557 983.3895394 814.8196121 955.6262884 838.4061519 871.8905555 771.4954052 859.9908772 857.380095 0.866304398 0.961571257 1.14697034 0.950359843 1.114588843 0.977869858 1.016924186 0.89982892 1.00304507 1 9.743791114 -10.12675411 13.12394939 0.999996053 0.99648534 0 0.081876481 0 0 0.078905775 0.019137461 7.47E-11 10.12675411 -0.003510714 NRPT(ph)SISWDGLDSGK ddPTM_A459_MK2206_30min_R1 1 NRPTSISWDGLDSGK 15 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 NRPT(0.866)S(0.133)IS(0.001)WDGLDSGK 132.9 0.00080889 27995000 7045.7 7300 7474.1 6578.5 6023.4 5327.3 6371.9 6692.5 6825.3 6405.5 TRUE FALSE 6446.426217 6824.768673 6966.778916 7085.17721 5783.475223 5628.927122 5946.842177 6633.988178 7534.81436 7199.061699 0.89545367 0.948008082 0.967734298 0.984180648 0.803365142 0.78189733 0.826057954 0.921507337 1.046638392 1 12.81359317 -8.140696442 4.569000062 1.021654187 0.887860932 0.40219848 0.065452055 0.262825645 8.357443598 0.055688376 0.019617592 7.23E-09 8.140696442 -0.133793255 NRPTS(ph)ISWDGLDSGK ddPTM_A459_MK2206_30min_R1 3 NRPTSISWDGLDSGK 15 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 NRPT(0.028)S(0.967)IS(0.005)WDGLDSGK;NRPT(0.047)S(0.95)IS(0.002)WDGLDS(0.002)GK;NRPT(0.1)S(0.896)IS(0.004)WDGLDSGK 199.05 0.00011046 92536000 16922.7 19186.3 19602.8 16582.7 15204.3 12852.1 15682.4 16776.6 16371.6 15017.4 TRUE FALSE 15483.3355 17937.26838 18272.21655 17859.90243 14598.68054 13579.7748 14636.25571 16629.92395 18073.48641 16877.86889 0.917375031 1.062768558 1.082613965 1.058184688 0.864959944 0.804590608 0.867186243 0.985309464 1.070839365 1 14.04284513 -4.422589064 12.25480446 0.971542133 4.57E-05 0.031860783 0.094418333 1482122.729 4139176.297 0.026816638 37489040.97 3.78E-05 4.422589064 -0.971496451 NRPTSISWDGLDS(ph)GK ddPTM_A459_MK2206_30min_R2 1 NRPTSISWDGLDSGK 15 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 NRPT(0.003)S(0.269)IS(0.008)WDGLDS(0.721)GK 100.18 0.036807 37714000 98747 106750 101650 89556 113630 82568 125130 95170 99954 110320 TRUE FALSE 106307.1462 101448.9502 105038.9603 82238.98832 109168.3153 85710.1831 108700.2807 107609.0458 108647.8182 106720.2674 0.996128934 0.950606222 0.984245662 0.770603282 1.022938921 0.803129388 1.018553301 1.008328112 1.018061713 1 16.70347466 NRPTSISWDGLDSGK ddPTM_A459_MK2206_30min_R2 1 NRPTSISWDGLDSGK 15 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 0 101.75 0.018991 4271000 31268 41791 42683 39185 39613 33115 36716 40805 32310 40119 FALSE TRUE 33661.90212 39715.71971 44106.02992 35983.46015 38057.59458 34375.21453 31895.1451 46138.3536 35120.2654 38809.92032 0.867353034 1.023339378 1.13646278 0.927171709 0.980615118 0.885732675 0.821829698 1.188828867 0.904930108 1 15.24413785 -7.753041491 24.99916035 1.035159632 0.956955219 0.109898513 0.10547369 442.3686955 1316870.507 0.051493732 0.02910347 1.77E-08 7.753041491 -0.078204413 NRS(ph)AEEGELAESK ddPTM_A459_MK2206_30min_R1 2 NRSAEEGELAESK 13 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 NRS(1)AEEGELAESK;NRS(1)AEEGELAESK 207.4 5.25E-05 169144000 12706.9 13395.4 12318.5 11232.7 8865.9 8015.5 9644.6 10390.5 8311.2 7964.9 TRUE FALSE 11626.11143 12523.35703 11482.35454 12097.8445 8512.752429 8469.330683 9001.226332 10299.65695 9175.178982 8951.651944 1.298767144 1.398999548 1.282707886 1.351465023 0.950969998 0.946119301 1.005538016 1.15058729 1.024970479 1 13.12793823 -6.25608427 24.99805018 1.01683999 1.334109034 0.871819828 0.06009092 163.0391061 761078.2116 0.019483555 0.024408794 5.55E-07 6.25608427 0.317269044 NRS(ph)AEEGELAESK ddPTM_A459_MK2206_30min_R2 3 NRSAEEGELAESK 13 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK 177.39 0.000493 158704000 485885 584398 489679 468073 532068 317196 467819 390843 385126 410012 TRUE FALSE 523084.7292 555377.6451 506004.6535 429829.9386 511176.3369 329267.116 406393.8033 441927.5221 418623.5633 396633.342 1.318811794 1.400229346 1.275749161 1.08369593 1.288788114 0.830154909 1.024608272 1.114196602 1.055442191 1 18.59744643 -5.868304599 1.076615821 1.028266186 1.378179692 0.602487225 0.105530083 0.38892085 0.893533227 0.041283066 0.101154612 1.35E-06 5.868304599 0.349913506 NRS(ph)NTPILVDGK ddPTM_A459_MK2206_30min_R2 1 NRSNTPILVDGK 12 1 P06744-2;P06744;A0A2U3TZU2;K7EQ48;A0A0J9YXP8;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;K7EPY4;K7ERC6;K7EP41 P06744-2 GPI Glucose-6-phosphate isomerase 1 NRS(0.906)NT(0.094)PILVDGK 70.451 0.034766 3450000 29108 30789 31563 32108 33485 24045 43392 29055 25750 35563 TRUE FALSE 31336.53086 29260.06303 32615.29467 29484.67369 32170.21065 24960.04932 37694.57828 32852.58826 27989.68845 34402.58222 0.91087729 0.850519384 0.948047866 0.857048273 0.935110349 0.725528368 1.095690377 0.954945418 0.813592662 1 15.07022924 -7.268411924 24.99857158 0.962302548 0.876005475 0.222179916 0.086564424 972.3076839 3485984.933 0.035069603 0.024221592 5.39E-08 7.268411924 -0.086297073 NRS(ph)SDGGSEEPPDRR ddPTM_A459_MK2206_30min_R1 1 NRSSDGGSEEPPDRR 15 2 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 NRS(0.752)S(0.248)DGGSEEPPDRR 92.236 0.0155 1094200 412.31 288.41 303.34 237.75 243.29 263.6 199.92 148.64 211.81 0 TRUE FALSE 377.2408694 269.6344566 282.750126 256.0615462 233.5992441 278.5248042 186.5837016 147.3404562 233.8284075 0 0 NRS(ph)SDGGSEEPPDRR ddPTM_A459_MK2206_30min_R2 1 NRSSDGGSEEPPDRR 15 2 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 NRS(0.816)S(0.183)DGGSEEPPDRR 73.735 0.047798 3131000 24107 15989 17297 12247 9890.7 8831.6 8020.6 8288.2 8090.1 17323 TRUE FALSE 25952.65046 15195.00951 17873.67335 11246.38092 9502.341421 9167.692727 6967.485586 9371.496198 8793.762274 16757.75193 1.548695229 0.906745104 1.066591356 0.671115134 0.567041538 0.547071753 0.415776866 0.559233496 0.524757874 1 14.032541 -3.951853179 0.645836779 0.561111507 3.651338848 0.706458514 0.179324549 4.364310153 0.624357548 0.075037542 12.70251842 0.000111724 3.951853179 3.090227341 NRVPS(ph)AGDVEK ddPTM_A459_MK2206_30min_R1 2 NRVPSAGDVEK 11 1 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 1 NRVPS(1)AGDVEK;NRVPS(1)AGDVEK 70.47 0.036392 25978000 6933.8 7812.1 8201.8 8009.5 6349.3 6043.5 7001.4 7437.8 7282 6621.1 TRUE FALSE 6344.043899 7303.53087 7645.084668 8626.393078 6096.393936 6385.677747 6534.349381 7372.772099 8038.989959 7441.371855 0.852536874 0.981476401 1.027375707 1.159247683 0.819256725 0.85813179 0.878110852 0.990781303 1.080310206 1 12.8613529 -8.000536766 24.73497494 1.03861867 0.944385302 0.148768059 0.096738747 34.37584098 1584030.06 0.058528088 0.027592165 9.99E-09 8.000536766 -0.094233368 NS(ph)EEEEEEK ddPTM_A459_MK2206_30min_R2 2 NSEEEEEEK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 NS(1)EEEEEEK;NS(1)EEEEEEK 131.32 0.003631 13698000 58671 14308.5 21043 17533.2 18846 10035.2 30633 49762 18403.3 43721 TRUE FALSE 63162.89687 13597.9607 21744.56312 16100.68147 18106.01135 10417.09657 26610.8503 56266.06426 20003.98577 42294.38735 1.493410848 0.321507452 0.514124083 0.380681279 0.428094896 0.246299739 0.6291816 1.330343523 0.472970222 1 15.3681786 -7.542440329 24.69904204 0.936946874 0.528010121 0.155922865 0.382085759 350.6344388 442715.4365 0.17346472 0.100167022 2.87E-08 7.542440329 -0.408936753 NS(ph)FTPLSSSNTIR ddPTM_A459_MK2206_30min_R2 2 NSFTPLSSSNTIR 13 0 O60825 O60825 PFKFB2 "6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase" 1 NS(0.972)FT(0.027)PLSSSNTIR;NS(0.731)FT(0.181)PLS(0.045)S(0.011)S(0.011)NT(0.02)IR 139.21 0.0009469 8964000 20857.3 19564.5 21330.8 20080.4 16446.5 20608.4 33913 28579 27823 38811 TRUE FALSE 22454.15092 18592.95538 22041.95823 18439.76709 15800.72777 21392.6671 29460.18236 32314.37343 30242.99425 37544.60025 0.598066054 0.495223155 0.587087306 0.491142986 0.420852204 0.569793445 0.784671622 0.860692968 0.805521807 1 15.19631781 -7.32618603 2.525756098 0.872513751 0.516829263 0.865859424 0.065795561 0.10375068 1.297479593 0.031897515 0.020201702 4.72E-08 7.32618603 -0.355684488 NS(ph)GIWESPELDR ddPTM_A459_MK2206_30min_R1 2 NSGIWESPELDR 12 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 NS(0.994)GIWES(0.006)PELDR;NS(1)GIWESPELDR 228.11 7.77E-10 17244800 1643.61 1835.53 2001.68 1683.85 1457.56 1601.57 1666.08 1563.98 1950.28 2105.27 TRUE FALSE 1503.812339 1716.036663 1865.811539 1813.540419 1399.502299 1692.249509 1554.938843 1550.306288 2153.018585 2366.086742 0.635569403 0.725263632 0.788564301 0.766472499 0.591483936 0.715210258 0.657177447 0.655219549 0.909949136 1 11.20828725 -8.400577819 3.793989171 0.995906673 0.695203611 0.773405106 0.057750068 0.10623181 2.542415164 0.058564267 0.015481221 3.98E-09 8.400577819 -0.300703062 NS(ph)GIWESPELDR ddPTM_A459_MK2206_30min_R2 2 NSGIWESPELDR 12 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 NS(1)GIWESPELDR;NS(0.999)GIWES(0.001)PELDR 137.79 0.001295 11121400 36367 40999 38308 37813 35338 33608 40351 30626 30681 38224 TRUE FALSE 39151.28548 38963.04928 39585.1696 34723.55694 33950.45256 34886.97599 35052.86523 34628.92335 33349.57792 36976.75401 1.058808068 1.053717405 1.070542038 0.939064498 0.918156649 0.943484006 0.947970317 0.936505226 0.901906585 1 15.17433096 -5.764713171 24.99962031 0.937807404 1.06029201 0.838010911 0.024149983 27.92953377 213280.4285 0.006374603 0.00991447 1.72E-06 5.764713171 0.122484606 NS(ph)GVNYLILDDDDR ddPTM_A459_MK2206_30min_R1 1 NSGVNYLILDDDDR 14 0 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 NS(1)GVNYLILDDDDR 142.72 0.00054381 16145000 1051.4 1313.4 1018.5 907.25 951.43 735.94 1006 920.15 1249 1294.5 TRUE FALSE 961.9729089 1227.897421 949.3670577 977.1265522 913.5325284 777.6082868 938.8915756 912.1052256 1378.83802 1454.872433 0.661207737 0.84398975 0.652543162 0.671623525 0.62791246 0.534485546 0.645342887 0.62693141 0.947738089 1 10.50667694 -8.309185832 5.115042131 0.987866635 0.658717789 0.750808526 0.072872054 0.111748233 6.680609041 0.073917585 0.02000605 4.91E-09 8.309185832 -0.329148846 NS(ph)IQFTDGYEVK ddPTM_A459_MK2206_30min_R2 2 NSIQFTDGYEVK 12 0 B4DG22;B1AXG1;B7ZB17;P51812;A0A2R8Y603 B4DG22 RPS6KA3 Ribosomal protein S6 kinase alpha-3 1 NS(1)IQFTDGYEVK;NS(1)IQFTDGYEVK 130.66 0.0021361 9109300 46241 45848 49721 47350 47135 38375 56446 44739 40908 58863 TRUE FALSE 49781.24651 43571.25499 51378.67332 43481.35353 45284.24307 39835.38752 49034.5724 50586.54091 44466.1039 56942.30513 0.8742401 0.765182493 0.902293527 0.763603676 0.795265365 0.69957455 0.861127281 0.888382386 0.780897503 1 15.79721328 -10.34606922 0.559532766 1.041645415 0.809327937 0.439655549 0.062452492 16.74353933 3.46896432 1.29932663 0.026980827 4.51E-11 10.34606922 -0.232317478 NS(ph)LESISSIDR ddPTM_A459_MK2206_30min_R1 3 NSLESISSIDR 11 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 NS(0.998)LES(0.002)ISSIDR;NS(0.526)LES(0.436)IS(0.037)S(0.001)IDR;NS(0.683)LES(0.317)IS(0.001)SIDR 157.33 0.00055892 23044700 2351.04 2819.22 2716.14 2321.56 2220.48 2571.5 3663.47 2473.21 4288.96 5285.7 TRUE FALSE 2151.071702 2635.688266 2531.775984 2500.366953 2132.03358 2717.096108 3419.086601 2451.586986 4734.81274 5940.532421 0.362100827 0.443678795 0.426186713 0.420899471 0.358896043 0.457382591 0.575552216 0.412688091 0.797035081 1 12.53637652 -8.422482176 2.566838277 1.000323869 0.43216352 0.912886845 0.059082133 0.070469627 0.946087085 0.058416248 0.015968631 3.78E-09 8.422482176 -0.568160349 down NS(ph)LSDPNIDR ddPTM_A459_MK2206_30min_R1 1 NSLSDPNIDR 10 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 NS(0.982)LS(0.018)DPNIDR 132.14 0.0024902 5811600 5528.6 5827.4 5139.6 3645.1 3132 2834.7 3113.7 1999.6 3065.9 3671.8 TRUE FALSE 5058.363538 5448.035201 4790.738272 3925.846234 3007.245808 2995.198264 2905.990754 1982.117708 3384.611276 4126.690305 1.225767665 1.320194829 1.160915387 0.951330472 0.728730674 0.725811254 0.704194049 0.480316564 0.82017574 1 12.01076946 -5.905347353 1.716131159 0.708617838 1.277127472 0.756546966 0.125071476 0.156714393 0.938878261 0.039324678 0.071540604 1.24E-06 5.905347353 0.568509633 NS(ph)LSDPNIDR ddPTM_A459_MK2206_30min_R2 3 NSLSDPNIDR 10 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 NS(0.991)LS(0.009)DPNIDR;NS(0.992)LS(0.008)DPNIDR;NS(0.999)LS(0.001)DPNIDR 125.84 0.0035578 21027800 347816 346407 272997 276940 202704 168592 188502 150040 114298 139109 TRUE FALSE 374445.0604 329204.9321 282098.5837 254313.1161 194744.8225 175007.8867 163751.461 169650.7432 124239.4334 134569.8847 2.782532371 2.446349217 2.096298026 1.889821907 1.447164965 1.300498154 1.216850719 1.260688775 0.923233558 1 17.03799606 -5.302011075 0.46808734 0.990997026 3.532670551 0.984388555 0.075225215 0.340228899 0.082358192 0.056317816 0.454627867 4.99E-06 5.302011075 2.541673525 up NS(ph)LTGEEGQLAR ddPTM_A459_MK2206_30min_R2 1 NSLTGEEGQLAR 12 0 Q9BX95 Q9BX95 SGPP1 Sphingosine-1-phosphate phosphatase 1 1 NS(0.999)LT(0.001)GEEGQLAR 123.63 0.0032509 6568000 36779 17623 24273 21813 15411 18528 37573 18875 17203 24277 TRUE FALSE 39594.82852 16747.86745 25082.24971 20030.80812 14805.88671 19233.09602 32639.61997 21342.02731 18699.28584 23484.84348 1.685973703 0.713135153 1.068018602 0.852924915 0.630444343 0.818957812 1.389816372 0.908757486 0.796227825 1 14.51944236 -4.752247452 24.9379205 0.912617719 1.685975255 0.57316772 0.201200369 272.4043828 738984.7232 0.052031369 0.631013801 1.77E-05 4.752247452 0.773357536 NS(ph)NSPPS(ph)PSSMNQR ddPTM_A459_MK2206_30min_R2 2 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 2 NS(1)NSPPS(0.957)PS(0.036)S(0.007)MNQR;NS(0.884)NS(0.116)PPS(0.989)PS(0.008)S(0.002)MNQR 163.9 6.80E-05 0 46480 54814 47510 51449 40389 46592 50716 45621 39925 46504 TRUE FALSE 50038.54454 52092.01647 49093.95969 47245.45212 38803.12492 48365.09121 44056.92828 51583.82134 43397.60433 44986.57829 1.112299411 1.157945735 1.091302374 1.050212173 0.862548929 1.075100464 0.979334947 1.146649141 0.964678933 1 15.45720702 -5.72299115 2.982457799 1.01086009 1.131805741 0.350257026 0.070622878 0.286869295 5.195185852 0.020221881 0.036564661 1.89E-06 5.72299115 0.120945651 NS(ph)PASPLK ddPTM_A459_MK2206_30min_R2 1 NSPASPLK 8 0 O43572;E7EMD6 O43572 AKAP10 "A-kinase anchor protein 10, mitochondrial" 1 NS(0.893)PAS(0.107)PLK 82.494 0.04118 15460000 149460 107460 119740 114530 98507 65536 137070 99444 62562 139630 TRUE FALSE 160902.7725 102123.6927 123732.0718 105172.5326 94639.12022 68030.0184 119072.5443 112441.6722 68003.52967 135073.8845 1.191220443 0.756058012 0.916032527 0.778629659 0.700647061 0.503650418 0.881536388 0.832445684 0.503454312 1 17.04338924 -2.050699154 1.07755864 0.740518638 199.9996872 0.39198477 0.156307665 745.2334555 2.52107144 0.0470768 364943.1662 0.008898173 2.050699154 199.2591686 NS(ph)PCFFR ddPTM_A459_MK2206_30min_R2 1 NSPCFFR 7 0 Q07343-3 Q07343-3 PDE4B "cAMP-specific 3,5-cyclic phosphodiesterase 4B" 1 NS(1)PCFFR 80.231 0.045277 1582700 21794 20523 19652 19656 18259 15671 20923 18511 17969 19721 TRUE FALSE 23462.5654 19503.85766 20307.18787 18050.04192 17542.05992 16267.37089 18175.78497 20930.45126 19531.91114 19077.50539 1.229855001 1.022348429 1.064457195 0.946142672 0.919515396 0.852699059 0.95273384 1.097127262 1.023818929 1 14.21958491 -3.645003054 1.045335932 0.97162994 3.349395748 0.55892916 0.066285884 13.46625569 1.874579995 0.023295426 61.3369812 0.000226463 3.645003054 2.377765808 NS(ph)PEDLGLSLTGDSCK ddPTM_A459_MK2206_30min_R1 4 NSPEDLGLSLTGDSCK 16 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 NS(0.985)PEDLGLS(0.009)LT(0.006)GDS(0.001)CK;NS(0.886)PEDLGLS(0.102)LT(0.003)GDS(0.009)CK;NS(0.999)PEDLGLS(0.001)LTGDSCK;NS(0.973)PEDLGLS(0.026)LT(0.001)GDSCK 152.13 0.00018081 122482000 18124.9 21438.2 20453.2 17513.1 15154.8 13070.2 15524.2 16015.9 19732.2 19135.8 TRUE FALSE 16583.28208 20042.56928 19064.89377 18861.962 14551.15223 13810.22343 14488.60894 15875.87467 21783.4328 21506.48737 0.77108278 0.931931326 0.886471763 0.877035923 0.676593624 0.642142215 0.673685511 0.738190035 1.012877297 1 14.39248429 -6.222292577 22.52156871 0.764224168 0.872712169 0.055448996 0.127640212 351.1322583 202008.5416 0.038067072 0.049142366 5.99E-07 6.222292577 0.108488002 NS(ph)PEDLGLSLTGDSCK ddPTM_A459_MK2206_30min_R2 8 NSPEDLGLSLTGDSCK 16 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 NS(0.974)PEDLGLS(0.024)LT(0.002)GDSCK;NS(0.992)PEDLGLS(0.007)LT(0.001)GDSCK;NS(1)PEDLGLSLTGDSCK;NS(0.998)PEDLGLS(0.002)LT(0.001)GDSCK;NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK 132.51 0.00053234 37730800 266762 284391.7 286879.3 267004 275754.8 191124.3 307654.1 232108.9 219265 289983 TRUE FALSE 287185.5038 270269.2217 296443.7127 245188.9191 264927.281 198397.6692 267258.7471 262446.3302 238336.2734 280520.8785 1.023758037 0.963454924 1.056761672 0.874048735 0.94441199 0.707247426 0.952723193 0.935567904 0.849620444 1 18.09774863 -5.771024251 24.99670093 0.888783718 1.009537885 0.328441608 0.078104316 218.8376089 570714.3342 0.021568767 0.032463629 1.69E-06 5.771024251 0.120754167 NS(ph)PGSQVASNPR ddPTM_A459_MK2206_30min_R1 7 NSPGSQVASNPR 12 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 NS(1)PGSQVASNPR;NS(0.999)PGS(0.001)QVASNPR;NS(0.967)PGS(0.032)QVAS(0.001)NPR;NS(0.959)PGS(0.04)QVAS(0.001)NPR;NS(1)PGSQVASNPR;NS(0.502)PGS(0.497)QVASNPR;NS(0.785)PGS(0.215)QVASNPR 206.49 1.03E-05 272327710 13061.27 13529.64 15102.02 11689.81 11973.78 10787.98 12678.43 11613.46 12911.47 11272.55 TRUE FALSE 11950.3404 12648.85798 14076.93696 12590.16119 11496.83899 11398.7861 11832.67507 11511.92474 14253.66351 12669.0786 0.943268313 0.998403939 1.111125553 0.993770865 0.907472386 0.899732843 0.933980714 0.90866314 1.125074993 1 13.62902398 -4.742444127 22.9831409 0.980919332 0.943267982 0.023617834 0.076144174 2659.43768 3217281.899 0.020046725 0.603338008 1.81E-05 4.742444127 -0.037651349 NS(ph)PGSQVASNPR ddPTM_A459_MK2206_30min_R2 5 NSPGSQVASNPR 12 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 NS(0.896)PGS(0.103)QVAS(0.001)NPR;NS(0.998)PGS(0.002)QVASNPR;NS(0.996)PGS(0.004)QVASNPR;NS(0.894)PGS(0.106)QVASNPR;NS(0.831)PGS(0.168)QVASNPR 174.47 0.0001415 404501500 75628.9 80336.8 72689.4 81740.5 79866.2 68392.8 94259.4 73194.8 57800.4 84774.5 TRUE FALSE 81419.10673 76347.39133 75112.82832 75062.03968 76730.25169 70995.53593 81883.02755 82761.61168 62827.77431 82008.31501 0.992815262 0.930971345 0.915917225 0.915297914 0.9356399 0.865711433 0.998472259 1.009185613 0.766114684 1 16.32348257 -3.657824908 0.001070231 1.544947939 0.314833972 0.001197283 0.071478118 11603181.27 1307.372331 742992.5137 759776.6643 0.000219875 3.657824908 -1.230113967 NS(ph)PGVPTGAK ddPTM_A459_MK2206_30min_R1 1 NSPGVPTGAK 10 0 R4GND7;B7ZC06;Q08379 R4GND7 GOLGA2 Golgin subfamily A member 2 1 NS(1)PGVPTGAK 97.597 0.02046 8268900 6379.4 6571.2 6388 6059.1 5553.5 4879.2 6097.5 6218.3 6004.9 5198.2 TRUE FALSE 5836.79853 6143.413686 5954.400358 6525.772932 5332.292335 5155.456087 5690.746901 6163.934059 6629.130844 5842.19226 0.999076763 1.051559656 1.019206505 1.117007562 0.912721132 0.882452315 0.974077306 1.0550721 1.134699193 1 12.51229412 -7.884897451 5.382419193 1.075654395 0.994525366 0.173556755 0.069159458 0.366447215 15.59956614 0.042491987 0.019886111 1.30E-08 7.884897451 -0.081129029 NS(ph)PLDCGSAS(ph)PNK ddPTM_A459_MK2206_30min_R2 1 NSPLDCGSASPNK 13 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 2 NS(0.642)PLDCGS(0.377)AS(0.981)PNK 127.88 0.034259 5271900 108970 75487 82266 70184 81026 61070 97056 101080 65986 99414 TRUE FALSE 117312.827 71738.42535 85008.70738 64449.74269 77844.51212 63394.06164 84312.43061 114291.5031 71725.343 96170.12932 1.219846826 0.7459533 0.883940866 0.670163835 0.80944585 0.659186611 0.876700814 1.188430377 0.745817267 1 16.55330124 -9.890890468 8.075182469 0.999998517 0.859773375 0.043459965 0.185256474 0 0 0.178717226 0.043345294 1.29E-10 9.890890468 -0.140225142 NS(ph)PLDCGSASPNK ddPTM_A459_MK2206_30min_R1 2 NSPLDCGSASPNK 13 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 NS(0.992)PLDCGS(0.008)ASPNK;NS(1)PLDCGSASPNK 151.49 0.00046411 4866700 3998.9 4490.7 4514 3956.3 3219.4 2959.7 3473.5 3698 4666.2 4126.2 TRUE FALSE 3658.772556 4198.354614 4207.602257 4261.014912 3091.164481 3127.275656 3241.789153 3665.668776 5151.268188 4637.384807 0.788973249 0.905328065 0.907322215 0.918840055 0.666574936 0.674361906 0.699055456 0.790460341 1.110813185 1 12.17909573 -8.254294575 24.38941588 1.055406601 0.794141032 0.558370332 0.093039691 297.8422888 1016723.171 0.075449502 0.027147486 5.57E-09 8.254294575 -0.261265568 NS(ph)PLDCGSASPNK ddPTM_A459_MK2206_30min_R2 4 NSPLDCGSASPNK 13 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 NS(0.986)PLDCGS(0.013)ASPNK;NS(0.994)PLDCGS(0.006)ASPNK;NS(1)PLDCGSASPNK;NS(1)PLDCGSASPNK 158.65 0.00036454 26672300 170123 165938 165988 148106 140234 100343 162815 141968 102968 166732 TRUE FALSE 183147.7477 157697.7602 171521.9571 136005.266 134727.7085 104161.6232 141437.1949 160523.705 111923.9705 161291.5485 1.135507405 0.977718682 1.063428051 0.84322624 0.835305444 0.645797155 0.876903943 0.995239407 0.693923343 1 17.29931132 -5.768704902 12.06003888 0.834317768 1.050802297 0.444852548 0.110980331 0.292274045 474.2856533 0.0307166 0.047719317 1.70E-06 5.768704902 0.216484529 NS(ph)PNNISGISNPPGTPR ddPTM_A459_MK2206_30min_R2 2 NSPNNISGISNPPGTPR 17 0 Q9NW25;A0A087WVT6;Q9BWW4-2;Q9BWW4-3;Q9BWW4 Q9NW25 SSBP3 Single-stranded DNA-binding protein 3 1 NS(0.901)PNNIS(0.045)GIS(0.045)NPPGT(0.01)PR;NS(0.997)PNNIS(0.003)GISNPPGTPR 92.151 0.0080421 8047300 47849 51857 46676 40577 44540 31693 47648 38195 35928 41597 TRUE FALSE 51512.35623 49281.85679 48232.15454 37261.7293 42791.1358 32899.09932 41391.76036 43187.21764 39052.9525 40239.6933 1.280137894 1.224707565 1.198621326 0.925994366 1.063406112 0.817578282 1.028630116 1.073249175 0.970508205 1 15.29633169 -5.672451745 5.166241291 0.98448455 1.24191025 0.727658669 0.070843109 0.107337106 4.726672003 0.019632828 0.034435023 2.13E-06 5.672451745 0.257425701 NS(ph)PPFLK ddPTM_A459_MK2206_30min_R2 1 NSPPFLK 7 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 NS(1)PPFLK 81.525 0.042863 16580000 170970 196150 181150 163900 164350 134230 192690 160470 135990 174470 TRUE FALSE 184059.5947 186409.4762 187189.4506 150508.8457 157896.7932 139338.2167 167389.5715 181443.98 147818.1644 168777.0582 1.09054866 1.104471652 1.109092981 0.891761282 0.935534692 0.825575574 0.991779175 1.075051206 0.87581906 1 17.36475929 -5.75177761 24.92481524 0.942270984 1.101681212 0.545991338 0.066506573 154.2975335 398042.775 0.018903973 0.032216557 1.77E-06 5.75177761 0.159410228 NS(ph)PQALR ddPTM_A459_MK2206_30min_R1 1 NSPQALR 7 0 Q7L7X3;Q7L7X3-3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 NS(1)PQALR 84.817 0.037033 39779000 4573.9 5554.9 4948.1 3972.4 3398.5 3939.6 5548.5 3925.1 2867.5 5861.9 TRUE FALSE 4184.865786 5193.275 4612.236758 4278.354936 3263.130549 4162.656747 5178.369689 3890.783265 3165.586886 6588.116427 0.635214303 0.788279178 0.700084282 0.649404877 0.495305538 0.631843228 0.786016724 0.590575972 0.480499536 1 12.68565034 -10.34257158 4.855888332 1.00000061 0.644505315 0.548197616 0.098042299 16773033 4465617.892 115.7268538 0.025106177 4.54E-11 10.34257158 -0.355495295 NS(ph)PQALR ddPTM_A459_MK2206_30min_R2 1 NSPQALR 7 0 Q7L7X3;Q7L7X3-3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 NS(1)PQALR 84.817 0.037033 15322000 28082 29298 25522 27510 27128 24421 32185 22777 19309 31218 TRUE FALSE 30231.97951 27843.10392 26372.89074 25262.345 26062.81841 25350.35827 27959.07084 25754.03211 20988.46192 30199.35922 1.001080165 0.921976646 0.873293057 0.836519239 0.863025544 0.839433648 0.925816692 0.852800615 0.694996929 1 14.88223032 -4.857928715 1.592874648 0.854726116 1.041595015 0.269189656 0.072411894 1.143341012 3.152873617 0.019820804 0.320865802 1.39E-05 4.857928715 0.1868689 NS(ph)PQALRR ddPTM_A459_MK2206_30min_R2 1 NSPQALRR 8 1 Q7L7X3;Q7L7X3-3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 NS(1)PQALRR 70.399 0.036686 65051000 63008 112680 94320 88009 126210 94232 75533 88866 93999 106780 TRUE FALSE 67831.94092 107084.4751 97464.58172 80818.38317 121254.3612 97818.06479 65615.42637 100481.0913 102174.8631 103295.7773 0.656676804 1.036678147 0.943548558 0.782397744 1.173855935 0.946970605 0.635218864 0.9727512 0.989148499 1 16.65642175 NS(ph)PSAASTSSNDSK ddPTM_A459_MK2206_30min_R2 1 NSPSAASTSSNDSK 14 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 NS(0.998)PS(0.002)AASTSSNDSK 235.78 1.71E-14 12312000 12340 8818.8 9648.9 8423.4 7999.2 6217.8 11596 10551 7530 12945 TRUE FALSE 13284.75989 8380.871216 9970.58951 7735.181275 7685.111215 6454.422736 10073.43127 11930.05193 8184.945789 12522.60571 1.060862267 0.669259371 0.796207254 0.617697423 0.613699049 0.515421701 0.804419743 0.952681271 0.653613631 1 13.61224717 -12.7134244 19.21610608 0.99598737 0.750582526 0 0.176640633 0 0 0 0.040212878 1.93E-13 12.7134244 -0.245404843 NS(ph)PSNLSSSSDTGSVGGTYR ddPTM_A459_MK2206_30min_R1 1 NSPSNLSSSSDTGSVGGTYR 20 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 NS(0.97)PS(0.03)NLSSSSDTGSVGGTYR 102.5 0.001639 0 342.91 199.21 311.74 376.3 267.11 295.49 332.51 285.23 341.16 240.8 TRUE FALSE 313.7437038 186.2413928 290.5799574 405.2826912 256.4704431 312.2203884 310.3288646 282.7362642 376.6248029 270.6321219 1.159299574 0.688171794 1.073708307 1.497540973 0.947671848 1.153670844 1.146681563 1.044725446 1.39164856 1 8.080189276 -5.513889061 24.93104526 1.169608327 0.913036742 0.207177391 0.190381058 538.7797061 1494192.134 0.048246995 0.089691183 3.06E-06 5.513889061 -0.256571585 NS(ph)PSNLSSSSDTGSVGGTYR ddPTM_A459_MK2206_30min_R2 1 NSPSNLSSSSDTGSVGGTYR 20 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 NS(0.571)PS(0.348)NLS(0.07)S(0.009)SSDT(0.001)GS(0.001)VGGTYR 213.13 3.88E-17 4526300 9738.7 9513.6 9243.8 9543.9 7918.5 7954.2 11485 10310 6220.6 9979.8 TRUE FALSE 10484.30236 9041.168458 9551.983678 8764.132841 7607.579903 8256.902655 9977.005704 11657.5524 6761.656544 9654.159943 1.085988053 0.936504938 0.989416348 0.907808954 0.788010552 0.85526889 1.033441103 1.207515979 0.700387873 1 13.23693501 -10.14898459 15.32813974 0.999999043 0.947966001 0.013551224 0.138801216 0 0 0.134341379 0.03258257 7.10E-11 10.14898459 -0.052033042 NS(ph)QDITPVDNSMDSNIHQR ddPTM_A459_MK2206_30min_R1 2 NSQDITPVDNSMDSNIHQR 19 0 Q59FP8;Q92859-3;Q92859-2;Q92859-4;Q92859 Q59FP8 NEO1 Neogenin 1 NS(1)QDITPVDNSMDSNIHQR;NS(1)QDITPVDNSMDSNIHQR 208.69 1.29E-16 10308400 3193.9 2491.8 2236.8 1970.23 3279 3418.3 3897.4 3316.2 3338.8 3195.3 TRUE FALSE 2922.242033 2329.583367 2084.972248 2121.977456 3148.390487 3611.841192 3637.411557 3287.206813 3685.880208 3591.157887 0.813732541 0.64869979 0.580584957 0.590889491 0.876706228 1.005759509 1.012879876 0.915361261 1.02637654 1 11.81023337 -6.438776443 3.709898506 0.985759377 0.653431456 0.848608256 0.066358033 0.091898888 2.374892859 0.022736007 0.025454216 3.64E-07 6.438776443 -0.332327921 NS(ph)QDITPVDNSMDSNIHQR ddPTM_A459_MK2206_30min_R2 1 NSQDITPVDNSMDSNIHQR 19 0 Q59FP8;Q92859-3;Q92859-2;Q92859-4;Q92859 Q59FP8 NEO1 Neogenin 1 NS(0.996)QDIT(0.004)PVDNSMDSNIHQR 108.79 0.00047901 9065200 26232 19792 24657 20920 19734 19783 34174 19752 22237 27935 TRUE FALSE 28240.34209 18809.15806 25479.05207 19210.76908 18959.144 20535.85593 29686.91275 22333.65422 24171.13406 27023.48324 1.045029682 0.696030112 0.942848553 0.710891668 0.70158032 0.759926311 1.098559815 0.826453571 0.894449241 1 14.72192602 -7.219017235 24.99952794 0.940403711 0.800921374 0.243291097 0.124117087 719.3859177 423937.087 0.046378834 0.035924634 6.04E-08 7.219017235 -0.139482336 NS(ph)RDGDPLPSSLSCK ddPTM_A459_MK2206_30min_R2 1 NSRDGDPLPSSLSCK 15 1 H3BP35;P53602 H3BP35 MVD Diphosphomevalonate decarboxylase 1 NS(0.617)RDGDPLPS(0.185)S(0.185)LS(0.013)CK 104.78 0.037893 0 15013 16833 15016 18488 17277 15748 22502 13908 13385 16126 TRUE FALSE 16162.40682 15997.0977 15516.62595 16977.47126 16598.61817 16347.30118 19547.46037 15725.82335 14549.20311 15599.80994 1.036064342 1.025467474 0.994667628 1.088312699 1.064026949 1.047916689 1.253057598 1.008077881 0.932652587 1 13.92924083 -5.762378535 24.9999895 1.064800513 1.019406581 0.038027769 0.078794091 80.19461333 2134869.588 0.02281928 0.036214462 1.73E-06 5.762378535 -0.045393932 NS(ph)S(ph)MSLDEKSRT(ph)MSR ddPTM_A459_MK2206_30min_R2 1 NSSMSLDEKSRTMSR 15 2 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;Q8IVL1-5;E9PNV5;Q8IVL1-6 A0A0A0MTL4 NAV2 Neuron navigator 2 3 NS(0.65)S(0.675)MS(0.675)LDEKS(0.15)RT(0.486)MS(0.365)R 61.532 0.028388 9930700 0 10252 3378.1 19924 10028 35051 3196.1 8059.6 14964 1345.1 TRUE FALSE 0 9742.900588 3490.724168 18296.14547 9634.250333 36384.89037 2776.448231 9113.017393 16265.54167 1301.209497 0 7.487572608 2.682676522 14.06087606 7.404073175 27.96236152 2.13374421 7.003497448 12.50032505 1 10.34563754 -1.880919049 15.52414593 8.734449376 4.036651746 0 7.968008657 0 0 1.798997669 0 0.0131547 1.880919049 -4.69779763 NS(ph)SDQEGNNISSSSGHR ddPTM_A459_MK2206_30min_R2 1 NSSDQEGNNISSSSGHR 17 0 Q8IWI9;Q8IWI9-3;H3BP52;H3BTF4 Q8IWI9 MGA MAX gene-associated protein 1 NS(0.5)S(0.5)DQEGNNISSSSGHR 84.025 0.0083517 1679900 2678.9 4956.4 3584.6 6562.2 5800.5 6678.7 5039.5 4796.6 6302.3 3645.6 TRUE FALSE 2883.998644 4710.272383 3704.108775 6026.047269 5572.743225 6932.862608 4377.807596 5423.532089 6850.462662 3526.644371 0.817774162 1.335624432 1.050321038 1.708719858 1.580182927 1.965852488 1.241352157 1.537873264 1.942487516 1 11.78408039 -5.756505925 24.9990342 1.593944409 1.09467821 0.368096918 0.298344529 127.1566989 644324.537 0.078006595 0.129858633 1.75E-06 5.756505925 -0.4992662 NS(ph)SEASSGDFLDLK ddPTM_A459_MK2206_30min_R1 1 NSSEASSGDFLDLK 14 0 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 NS(0.794)S(0.206)EASSGDFLDLK 256.89 1.32E-35 28686000 2419.3 2599 2210.7 1541.4 1227.1 2111.1 2511.7 1797.8 2931.3 3797.3 TRUE FALSE 2213.525831 2429.804628 2060.643843 1660.118895 1178.222009 2230.628658 2344.149076 1782.082024 3236.019125 4267.738192 0.51866486 0.569342476 0.48284214 0.388992675 0.27607645 0.522672328 0.549271996 0.417570606 0.758251556 1 12.05925596 -8.485438801 2.923320582 0.998531273 0.465237299 0.81023927 0.083899859 0.104048201 2.012618238 0.088185403 0.023632256 3.27E-09 8.485438801 -0.533293974 NS(ph)SEASSGDFLDLK ddPTM_A459_MK2206_30min_R2 2 NSSEASSGDFLDLK 14 0 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 NS(0.991)S(0.009)EASSGDFLDLK;NS(0.777)S(0.217)EAS(0.006)SGDFLDLK 197.1 0.00010903 11306500 124273 84346 94526 88322 82185 57933 98763 79102 51439 99251 TRUE FALSE 133787.4364 80157.50029 97677.44966 81105.81007 78958.00395 60137.68091 85795.29946 89440.903 55913.07124 96012.448 1.393438447 0.834865707 1.017341519 0.844742653 0.822372574 0.626352959 0.893585168 0.931555281 0.582352314 1 16.55093384 -2.384620539 1.19366836 0.820125431 200 0.58560748 0.137630558 369.5354534 1.973596502 0.039361824 199903.9895 0.004124577 2.384620539 199.1798746 NS(ph)SEKLPTELSK ddPTM_A459_MK2206_30min_R1 1 NSSEKLPTELSK 12 1 P38432 P38432 COIL Coilin 1 NS(0.982)S(0.018)EKLPTELSK 138.19 0.0059903 23186000 1443.9 1543.6 1899.8 1566.9 1169.6 855.67 1325.5 1377.5 1626.7 1216.8 TRUE FALSE 1321.088723 1443.111359 1770.846869 1687.582909 1123.012355 904.1172959 1237.078314 1365.456663 1795.801286 1367.54637 0.966028466 1.055255888 1.294908098 1.234022441 0.821187771 0.661123685 0.904596978 0.998471929 1.313155682 1 10.41737404 -6.258000467 24.97977332 0.932990036 1.142914904 0.210397509 0.176322662 485.4361152 3526136.387 0.05793184 0.07175982 5.52E-07 6.258000467 0.209924868 NS(ph)SEKLPTELSK ddPTM_A459_MK2206_30min_R2 2 NSSEKLPTELSK 12 1 P38432 P38432 COIL Coilin 1 NS(0.985)S(0.015)EKLPTELSK;NS(0.947)S(0.053)EKLPTELSK 75.998 0.026722 74923000 310650 366050 367550 392700 380960 273830 478670 318260 280920 459990 TRUE FALSE 334433.6028 347872.4893 379803.9336 360615.1538 366001.5962 284250.7925 415820.054 359857.6747 305353.9138 444980.564 0.751569012 0.781770076 0.853529265 0.810406528 0.822511422 0.638793726 0.934467902 0.808704253 0.686218542 1 18.7633828 -11.37583349 3.272756047 1.068813275 0.79159104 0.394960888 0.078741153 58599388.27 707603.7778 30371048.1 0.018616819 4.21E-12 11.37583349 -0.277222236 NS(ph)SNFMNTTNFQSLR ddPTM_A459_MK2206_30min_R1 1 NSSNFMNTTNFQSLR 15 0 Q7Z7G8-2;Q7Z7G8-6;Q7Z7G8;Q7Z7G8-3;Q7Z7G8-4 Q7Z7G8-2 VPS13B Vacuolar protein sorting-associated protein 13B 1 NS(0.5)S(0.5)NFMNTTNFQSLR 88.056 0.01802 8675900 2048 1751.4 2038.5 1621.2 1786.6 1257.2 1629.9 1550.3 1490.6 1502.2 TRUE FALSE 1873.806846 1637.383542 1900.1323 1746.065105 1715.435939 1328.381578 1521.172345 1536.745891 1645.553204 1688.303877 1.109875344 0.969839354 1.125468185 1.034212578 1.016070603 0.786814267 0.90100625 0.910230623 0.97467833 1 10.72135888 -6.541467819 24.61071105 0.907350508 1.053986082 0.523863824 0.065878265 154.7121955 204827.2016 0.021218926 0.021222437 2.87E-07 6.541467819 0.146635574 NS(ph)SPGEASLLEK ddPTM_A459_MK2206_30min_R2 1 NSSPGEASLLEK 12 0 Q76FK4-2;Q76FK4-4;Q76FK4 Q76FK4-2 NOL8 Nucleolar protein 8 1 NS(0.9)S(0.1)PGEASLLEK 158.89 0.00045831 43164000 133690 133220 126530 122800 124210 92591 149670 114110 94481 125870 TRUE FALSE 143925.4092 126604.4885 130748.447 112766.8472 119332.8913 96114.61539 130018.1492 129024.5688 102698.7866 121762.8722 1.182013914 1.039762665 1.073795687 0.926118489 0.980043334 0.78935897 1.067797982 1.05963802 0.843432688 1 16.89371477 -4.788268263 0.990519709 0.955328955 1.281942495 0.388468878 0.086694726 2.140793256 1.6832065 0.029249454 0.749496122 1.63E-05 4.788268263 0.326613539 NS(ph)SSESAIVPK ddPTM_A459_MK2206_30min_R2 1 NSSSESAIVPK 11 0 Q5THJ4-2;Q5THJ4;H3BLS7;A0A2R8YD87 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 NS(0.473)S(0.473)S(0.046)ES(0.009)AIVPK 101.45 0.013491 0 20522 24330 24712 22714 21840 20730 29206 16875 20463 24578 TRUE FALSE 22093.1801 23121.80758 25535.88575 20858.19354 20982.45186 21518.89468 25371.21712 19080.62044 22242.83475 23776.02187 0.929221054 0.972484283 1.074018433 0.877278531 0.882504734 0.905067079 1.067092605 0.802515263 0.935515406 1 14.53721973 -5.785188769 24.99991172 0.919462531 0.989965677 0.142751952 0.075251765 420.1478353 442268.9593 0.02111948 0.031343817 1.64E-06 5.785188769 0.070503146 NS(ph)SSPVSPASVPGQR ddPTM_A459_MK2206_30min_R2 1 NSSSPVSPASVPGQR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 NS(0.333)S(0.333)S(0.333)PVSPASVPGQR 101.2 0.010791 0 6518.5 5635.9 6551.3 6834.6 5673.4 6839.1 7852.7 6273.9 6774.7 6717.5 TRUE FALSE 7017.561372 5356.029401 6769.717072 6276.191317 5450.633809 7099.366743 6821.631057 7093.920272 7363.95116 6498.308525 1.079905847 0.824219007 1.04176603 0.965819227 0.83877732 1.092494565 1.049754876 1.091656428 1.133210455 1 12.66584853 -6.79464468 24.99983427 1.077672606 0.949070297 0.37190035 0.080034685 194.4147466 146370.9607 0.026878531 0.023706052 1.60E-07 6.79464468 -0.128602309 NS(ph)TELAPPLPVR ddPTM_A459_MK2206_30min_R1 2 NSTELAPPLPVR 12 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NS(0.5)T(0.5)ELAPPLPVR;NS(0.995)T(0.005)ELAPPLPVR 154.13 0.00045044 68398000 3991.1 5089.6 5215.7 4162.1 3803.9 4098.8 5412.8 3806.4 6198.4 7261.6 TRUE FALSE 3651.635987 4758.266115 4861.672816 4482.665663 3652.382608 4330.870514 5051.721988 3773.121046 6842.745861 8161.22183 0.447437414 0.583033547 0.59570404 0.549264039 0.447528898 0.530664477 0.618990893 0.46232306 0.838446253 1 12.99456944 -8.433660721 3.611824174 0.996688909 0.534765176 0.876406783 0.059852133 0.067830222 1.620728578 0.057488562 0.015199795 3.68E-09 8.433660721 -0.461923733 NS(ph)TELAPPLPVR ddPTM_A459_MK2206_30min_R2 6 NSTELAPPLPVR 12 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NS(0.999)T(0.001)ELAPPLPVR;NS(0.977)T(0.023)ELAPPLPVR;NS(0.774)T(0.226)ELAPPLPVR;NS(0.774)T(0.226)ELAPPLPVR;NS(0.771)T(0.229)ELAPPLPVR;NS(0.967)T(0.033)ELAPPLPVR 186.29 0.0001043 151358600 175355 164818 184644 184186 148775 156968 199616 129564 135615.3 176095 TRUE FALSE 188780.3136 156633.3778 190799.9388 169137.4146 142933.346 162941.5272 173406.1794 146498.4597 147410.8737 170349.0346 1.108197144 0.919484975 1.120052951 0.992887427 0.839061673 0.956515707 1.017946359 0.859989961 0.865346106 1 17.37813425 -6.007332869 24.69297498 0.921953655 1.039635888 0.365063881 0.074845944 330.5566512 1113137.5 0.021055442 0.029842174 9.83E-07 6.007332869 0.117682233 NS(ph)TELAPPLPVRR ddPTM_A459_MK2206_30min_R1 4 NSTELAPPLPVRR 13 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NS(0.715)T(0.285)ELAPPLPVRR;NS(0.792)T(0.208)ELAPPLPVRR;NS(0.765)T(0.235)ELAPPLPVRR;NS(0.924)T(0.076)ELAPPLPVRR 139 0.0004917 28708100 7563.5 8066.5 9110.6 9016 9611.5 7099.1 7980.1 9005.5 6711.7 5300.04 TRUE FALSE 6920.184607 7541.369384 8492.197856 9710.413882 9228.653602 7501.044907 7447.76209 8926.765863 7409.405233 5956.648968 1.161758003 1.26604227 1.425666998 1.630180649 1.549302914 1.259272612 1.250327513 1.498622113 1.243888178 1 12.54028523 -6.808907577 24.99992491 1.281579878 1.412264088 0.166621836 0.167293357 281.1238629 148056.6331 0.062750892 0.055341219 1.55E-07 6.808907577 0.13068421 NS(ph)TPFMAEHLEETLSAVTNNR ddPTM_A459_MK2206_30min_R2 1 NSTPFMAEHLEETLSAVTNNR 21 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2;B0QYZ7 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 NS(0.5)T(0.5)PFMAEHLEETLSAVTNNR 76.98 0.001788 1876600 2731.3 2225.6 2211.4 2418.7 2120.4 2096.4 2773.4 1088.2 2639.9 2421.1 TRUE FALSE 2940.410428 2115.07994 2285.126972 2221.084473 2037.142442 2176.179971 2409.249249 1230.431476 2869.51373 2342.099705 1.255459117 0.903069983 0.975674506 0.948330452 0.869793219 0.929157698 1.02867066 0.525354012 1.225188545 1 11.19358678 -4.759495891 24.89543139 0.921646788 1.255459561 0.251088165 0.165378423 62.88398506 805297.8173 0.037949987 0.240226235 1.74E-05 4.759495891 0.333812773 NS(ph)WDSPAFSNDVIR ddPTM_A459_MK2206_30min_R1 4 NSWDSPAFSNDVIR 14 0 A0A0C4DGT3;A0A3B3IU98;A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695 A0A0C4DGT3;A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 NS(0.999)WDS(0.001)PAFSNDVIR;NS(0.765)WDS(0.229)PAFS(0.006)NDVIR;NS(0.973)WDS(0.027)PAFSNDVIR;NS(0.995)WDS(0.005)PAFSNDVIR 260.25 8.60E-36 80080500 6740.13 7898.2 8035.3 6252.81 6670.63 6071.5 7187.92 7207.15 7110.9 6800.1 TRUE FALSE 6166.84655 7384.025744 7489.886224 6734.40251 6404.924682 6415.263083 6708.426972 7144.138647 7850.103502 7642.547726 0.806909786 0.966173325 0.980024789 0.881172451 0.838061457 0.8394142 0.877773645 0.934784957 1.02715793 1 12.89983794 -8.072024437 3.282922483 1.012627042 0.887808494 0.495140305 0.051673475 0.242914955 4.882214867 0.043507156 0.014964278 8.47E-09 8.072024437 -0.124818548 NS(ph)WDSPAFSNDVIR ddPTM_A459_MK2206_30min_R2 1 NSWDSPAFSNDVIR 14 0 A0A0C4DGT3;A0A3B3IU98;A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695 A0A0C4DGT3;A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 NS(0.999)WDS(0.001)PAFSNDVIR 195.28 0.00012407 19030000 7975.7 9559.9 9010.7 13134 11216 11518 12697 10354 8946 10037 TRUE FALSE 8586.325724 9085.169267 9311.112241 12060.91019 10775.60348 11956.32556 11029.86865 11707.30335 9724.106909 9709.493512 0.884322721 0.935699607 0.958969923 1.242177068 1.109800781 1.23140569 1.135988055 1.205758399 1.001505063 1 13.24518033 -5.63909923 6.064328162 1.143782538 0.919382163 0.578498709 0.080696689 0.131124517 6.414350888 0.020811049 0.036394868 2.30E-06 5.63909923 -0.224400375 NSAPASVS(ph)PDGTR ddPTM_A459_MK2206_30min_R1 1 NSAPASVSPDGTR 13 0 C9J637;A0A590UJ51;H0Y7H7;H0Y599;Q8N1I0-2;Q8N1I0;Q8N1I0-3;A0A590UJM5 C9J637 DOCK4 Dedicator of cytokinesis protein 4 1 NSAPAS(0.234)VS(0.765)PDGT(0.001)R 139 0.00095779 4851600 3779 3418.1 3278.1 3054.9 3031.8 3024.5 3766 3158.6 2613.3 2873.7 TRUE FALSE 3457.576206 3195.581069 3055.591705 3290.188927 2911.036986 3195.744576 3514.777011 3130.984693 2884.961887 3229.715651 1.070551274 0.989431087 0.946086911 1.018724025 0.901329188 0.989481713 1.088262061 0.969430449 0.893255691 1 11.65719144 -4.772633889 4.362783672 0.977511022 1.077950274 0.217680292 0.05345938 0.335478395 13.46868902 0.013725928 0.105119884 1.69E-05 4.772633889 0.100439251 NSAPASVS(ph)PDGTR ddPTM_A459_MK2206_30min_R2 2 NSAPASVSPDGTR 13 0 C9J637;A0A590UJ51;H0Y7H7;H0Y599;Q8N1I0-2;Q8N1I0;Q8N1I0-3;A0A590UJM5 C9J637 DOCK4 Dedicator of cytokinesis protein 4 1 NSAPASVS(0.564)PDGT(0.436)R;NSAPAS(0.029)VS(0.5)PDGT(0.471)R 109.48 0.0059211 9146500 22689 24425 21448.1 26217 28779 24703 27180 19868.1 25544 21881.2 TRUE FALSE 24426.08728 23212.09002 22163.16895 24074.98724 27648.99186 25643.08998 23611.23335 22464.92889 27765.77095 21167.21824 1.153958305 1.096605598 1.047051564 1.137371334 1.306217546 1.211452997 1.115462272 1.061307567 1.311734524 1 14.36954406 -4.39946826 20.13087203 1.146795237 3.345587929 0 0.099597397 10462.03182 1639000.473 0.024247977 42089.71449 3.99E-05 4.39946826 2.198792691 NSAPASVSPDGT(ph)R ddPTM_A459_MK2206_30min_R2 1 NSAPASVSPDGTR 13 0 C9J637;A0A590UJ51;H0Y7H7;H0Y599;Q8N1I0-2;Q8N1I0;Q8N1I0-3;A0A590UJM5 C9J637 DOCK4 Dedicator of cytokinesis protein 4 1 NSAPAS(0.029)VS(0.315)PDGT(0.656)R 120.32 0.0071527 6568800 13370 18471 15609 16672 18024 19369 18190 12684 15249 14864 TRUE FALSE 14393.61748 17553.757 16129.39627 15309.84427 17316.2872 20106.10087 15801.63115 14341.84235 16575.33046 14378.9889 1.001017358 1.220792166 1.12173369 1.064737192 1.20427711 1.398297266 1.098938963 0.997416609 1.152746593 1 13.81167461 -11.17918772 7.803449629 0.999701115 1.14370776 0.12290359 0.111800392 0.000608726 2.68E-05 0.11334815 0.027434696 6.62E-12 11.17918772 0.144006645 NSASAT(ph)TPLSGNSSR ddPTM_A459_MK2206_30min_R1 1 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NS(0.009)AS(0.128)AT(0.432)T(0.432)PLSGNSSR 202.79 2.70E-05 8491300 2647.7 2484.4 2329.8 1850.3 1909.7 2023.4 2357.1 2284.8 1892.8 1842.9 TRUE FALSE 2422.499211 2322.665108 2171.659667 1992.810427 1833.632605 2137.963159 2199.86216 2264.824234 2089.563333 2071.212365 1.169604456 1.121403651 1.048496863 0.962146837 0.88529435 1.032227885 1.06211328 1.093477556 1.008860013 1 11.01625977 -5.24420037 2.529851446 1.008644722 1.160670236 0.517208762 0.053571106 0.276981325 3.37842321 0.016769777 0.05706213 5.70E-06 5.24420037 0.152025514 NSASAT(ph)TPLSGNSSR ddPTM_A459_MK2206_30min_R2 2 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NS(0.006)AS(0.134)AT(0.489)T(0.371)PLSGNSSR;NS(0.062)AS(0.006)AT(0.466)T(0.466)PLSGNSSR 157.37 0.00036332 10224100 55182 55416 48502 52424 49157 43327 50928 39924 33668 58130 TRUE FALSE 59406.77635 52664.12202 50119.03247 48140.7915 47226.84919 44975.83935 44241.09242 45142.20388 36596.38178 56233.22286 1.056435561 0.936530388 0.891270852 0.856091632 0.839838921 0.799809029 0.786742964 0.802767503 0.65079645 1 15.77913511 -4.241492373 0.600130342 0.795267928 1.419010453 0.468051286 0.080371892 5.271164931 0.898542167 0.036711344 2.622568894 5.73E-05 4.241492373 0.623742525 NSASATT(ph)PLSGNSS(ph)RR ddPTM_A459_MK2206_30min_R2 1 NSASATTPLSGNSSRR 16 1 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 2 NS(0.009)AS(0.05)AT(0.086)T(0.377)PLS(0.275)GNS(0.204)S(1)RR 97.129 0.016464 0 1065 875.47 729.76 1226 764.08 475.23 454.2 656.23 1062.2 433.15 TRUE FALSE 1146.537219 831.9954329 754.0898342 1125.831878 734.07838 493.3152107 394.5629944 742.0015142 1154.588236 419.016351 2.736258898 1.985591805 1.799666845 2.686844739 1.751908674 1.177317328 0.941641045 1.770817565 2.755472986 1 8.710862732 -6.50716253 22.05158618 1.532079489 2.240569034 0.305406858 0.549140095 213.5246207 299599.4554 0.179810655 0.1973257 3.11E-07 6.50716253 0.708489545 NSASATT(ph)PLSGNSSR ddPTM_A459_MK2206_30min_R1 2 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASAT(0.159)T(0.539)PLS(0.302)GNS(0.001)SR;NSAS(0.001)AT(0.227)T(0.772)PLSGNSSR 179.55 4.68E-05 21731000 8042.7 7834.3 8130 6907.1 7046 5945.3 6792.4 5992.9 5726.3 5927.7 TRUE FALSE 7358.626131 7324.285646 7578.158251 7439.086039 6765.3429 6281.917748 6339.291389 5940.504707 6321.569377 6662.068228 1.104555805 1.099401176 1.137508352 1.116633121 1.015501893 0.942938069 0.951550055 0.891690764 0.948889918 1 12.70175441 -6.479288682 2.419806821 0.93972643 1.116179953 0.895275416 0.02691177 0.083925175 0.977712501 0.009381876 0.010348917 3.32E-07 6.479288682 0.176453523 NSASATT(ph)PLSGNSSR ddPTM_A459_MK2206_30min_R2 1 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NS(0.024)AS(0.018)AT(0.087)T(0.871)PLS(0.001)GNSSR 129.05 0.0021438 4116400 19115 17379 15708 22438 17262 16665 21300 15069 15211 17331 TRUE FALSE 20578.4591 16515.98413 16231.69688 20604.74362 16584.20715 17299.19825 18503.28441 17038.57004 16534.02528 16765.49089 1.227429559 0.985117838 0.968161146 1.228997335 0.98918709 1.031833685 1.103653006 1.016288169 0.986193926 1 14.03320711 -4.75106113 24.97834829 1.039575533 1.227429953 0.374525237 0.074571617 491.8892754 1183798.315 0.01844011 0.253913493 1.77E-05 4.75106113 0.18785442 NSASATTPLS(ph)GNSSR ddPTM_A459_MK2206_30min_R1 3 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASAT(0.003)T(0.01)PLS(0.972)GNS(0.015)SR;NSASATT(0.008)PLS(0.991)GNSSR;NSASAT(0.01)T(0.035)PLS(0.954)GNSSR 231.41 5.67E-14 148809000 12469.4 13649.1 12676.4 11848.5 12150.8 10307.4 10532.8 10580.3 9974.5 8420.06 TRUE FALSE 11408.81205 12760.54111 11815.96129 12761.07352 11666.80791 10890.99608 9830.17613 10487.79755 11011.38497 9463.200601 1.205597612 1.348438192 1.248622087 1.348494454 1.232860678 1.150878708 1.038779219 1.108271714 1.163600502 1 13.20811249 -6.781659093 2.489243064 1.08730967 1.289238714 0.7312131 0.057572818 0.14465301 1.837252608 0.021024408 0.019216722 1.65E-07 6.781659093 0.201929044 NSASATTPLS(ph)GNSSR ddPTM_A459_MK2206_30min_R2 3 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASAT(0.016)T(0.172)PLS(0.812)GNSSR;NSASATT(0.001)PLS(0.999)GNSSR;NSASAT(0.001)T(0.02)PLS(0.979)GNSSR 208.07 1.69E-06 121681000 191633 261124 221295 235839 224252 178534 251080 184196 171115 194611 TRUE FALSE 206304.5698 248156.9619 228672.8649 216570.1993 215446.7397 185328.2365 218112.8944 208271.0496 185998.2734 188260.859 1.095844197 1.318154837 1.214659627 1.150372948 1.144405379 0.984422558 1.158567402 1.106289702 0.987981646 1 17.52237356 -6.262806463 1.726062363 1.06157126 1.217608317 0.458823579 0.07431799 0.3341553 1.967085306 0.026095412 0.034757377 5.46E-07 6.262806463 0.156037057 NSASATTPLSGNS(ph)SR ddPTM_A459_MK2206_30min_R1 1 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASAT(0.001)TPLS(0.009)GNS(0.629)S(0.361)R 97.776 0.0093089 3011100 1629.2 1572.1 1439.8 1267.1 1293.9 1288.8 1307.4 1478.2 1272.1 1479.9 TRUE FALSE 1490.627985 1469.756004 1342.070388 1364.692262 1242.361223 1361.770742 1220.185731 1465.276253 1404.339347 1663.241185 0.89621878 0.8836698 0.806900647 0.820501725 0.746951936 0.818745204 0.733619239 0.880976413 0.844338969 1 10.69978167 -8.89384053 1.334869687 0.999517645 0.818010775 0.515957766 0.051204092 1.177922845 3.183292051 0.051609894 0.01532857 1.28E-09 8.89384053 -0.18150687 NSASATTPLSGNS(ph)SR ddPTM_A459_MK2206_30min_R2 2 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASATT(0.001)PLS(0.018)GNS(0.529)S(0.452)R;NSASAT(0.01)T(0.019)PLS(0.036)GNS(0.468)S(0.468)R 122.97 0.0014965 90747000 88871 103216 90386 96250 101693 83183 103370 80077 69260 84549 TRUE FALSE 95675.03209 98090.44353 93399.42413 88386.06711 97700.02185 86348.58735 89797.39483 90543.33885 75284.10961 81790.17305 1.169761947 1.199293752 1.141939436 1.08064409 1.194520298 1.055733032 1.097899558 1.107019773 0.920454216 1 16.3196399 -7.6342958 0.638318056 0.972471762 1.16392682 0.613968537 0.051959273 0.507681188 0.413954218 0.047856265 0.027115805 2.32E-08 7.6342958 0.191455057 NSASATTPLSGNSS(ph)R ddPTM_A459_MK2206_30min_R1 4 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASATTPLSGNS(0.039)S(0.961)R;NSASATTPLSGNS(0.23)S(0.77)R;NSASATTPLS(0.001)GNS(0.072)S(0.927)R;NSASATTPLSGNS(0.248)S(0.752)R 198.67 2.05E-05 106412200 17730.3 17121 16765.7 14285.9 15868.5 12870.7 15754.6 16014.3 14989 13128.5 TRUE FALSE 16222.24488 16006.41979 15627.691 15386.20249 15236.42404 13599.42791 14703.63938 15874.28866 16547.16019 14754.9577 1.099443673 1.08481638 1.059148479 1.042781878 1.032630819 0.92168532 0.996521961 1.075861347 1.121464428 1 13.84891216 -5.545273062 1.57273674 1.023266656 1.09628254 0.225611444 0.0492041 0.721601466 3.415137008 0.017031415 0.051019484 2.85E-06 5.545273062 0.073015884 NSASATTPLSGNSS(ph)R ddPTM_A459_MK2206_30min_R2 2 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASATTPLSGNS(0.131)S(0.869)R;NSASATTPLS(0.002)GNS(0.168)S(0.83)R 144.17 0.0003744 54523000 59788 65871 60971 65346 65559 55984 69950 49631 47165 66771 TRUE FALSE 64365.41525 62599.94193 63003.74271 60007.02277 62984.82425 58114.51035 60765.48097 56117.94211 51267.32645 64592.26774 0.996487931 0.969155351 0.975406886 0.929012479 0.975113995 0.899713114 0.940754723 0.868802785 0.793706867 1 15.97907385 -6.917800401 1.046392407 0.882173065 0.973439644 0.28388435 0.052216141 0.604713893 1.386757429 0.030562386 0.023732577 1.21E-07 6.917800401 0.091266579 NSATCHSEDS(ph)DLEID ddPTM_A459_MK2206_30min_R2 2 NSATCHSEDSDLEID 15 0 Q13371-2;Q13371 Q13371-2 PDCL Phosducin-like protein 1 NSATCHS(0.001)EDS(0.999)DLEID;NSATCHS(0.001)EDS(0.999)DLEID 107.82 0.0041436 40335000 75639 105427 89778 123096 118545 128391 125303 88885 102724 82423 TRUE FALSE 81429.98 100191.6485 92771.15371 113038.663 113890.3277 133277.0095 108850.5656 100502.5747 111658.7478 79733.54426 1.021276312 1.256580896 1.163514736 1.417705234 1.428386618 1.671529978 1.365179067 1.260480462 1.400398651 1 16.28289918 -5.756330114 24.587286 1.389859017 1.158069578 0.249560248 0.167180711 133.0725194 640372.0793 0.045207777 0.075296862 1.75E-06 5.756330114 -0.231789439 NSATFKS(ph)FEDR ddPTM_A459_MK2206_30min_R1 2 NSATFKSFEDR 11 1 O43399;O43399-5;O43399-7;O43399-2;O43399-4;O43399-3;O43399-6 O43399;O43399-2 TPD52L2 Tumor protein D54 1 NSAT(0.001)FKS(0.999)FEDR;NSAT(0.005)FKS(0.995)FEDR 153.09 0.0026904 137175000 16806.4 12461.3 11193.1 18248 10013.7 11591.1 7400.5 9955.2 6621.7 2553.41 TRUE FALSE 15376.92743 11650.06711 10433.34356 19653.46412 9614.833125 12247.37807 6906.826148 9868.162736 7310.049411 2869.745708 5.358289197 4.059616527 3.635633474 6.848503708 3.350412929 4.267757255 2.406772882 3.438688908 2.547281242 1 11.48670719 -7.955803621 0.460678123 1.009856737 4.942206495 0.593952409 0.978908616 0.685018783 0.375694955 1.08578253 0.734533161 1.11E-08 7.955803621 3.932349757 NSCNVLHPQS(ph)PNNSNR ddPTM_A459_MK2206_30min_R2 1 NSCNVLHPQSPNNSNR 16 0 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 NS(0.002)CNVLHPQS(0.846)PNNS(0.151)NR 76.051 0.019786 7113900 21328 23544 21418 21851 19212 18493 24912 18152 19236 22561 TRUE FALSE 22960.88808 22374.8392 22132.06543 20065.7034 18457.64035 19196.76407 21641.02448 20524.52873 20909.11251 21824.83642 1.052053158 1.025200774 1.014077036 0.919397654 0.845717237 0.879583412 0.991577855 0.940420736 0.958042118 1 14.41368322 -5.686831334 4.452067327 0.927498935 1.033903853 0.496430522 0.044735483 0.180425685 6.720270832 0.013362605 0.023523961 2.06E-06 5.686831334 0.106404918 NSCNVLHPQSPNNS(ph)NR ddPTM_A459_MK2206_30min_R2 1 NSCNVLHPQSPNNSNR 16 0 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 NSCNVLHPQS(0.182)PNNS(0.818)NR 88.57 0.0091537 5756300 16794 15863 17992 21847 18828 14682 24416 11810 13938 15317 TRUE FALSE 18079.76155 15075.26649 18591.8443 20062.03021 18088.71812 15240.7338 21210.14987 13353.60755 15150.30205 14817.20754 1.220186833 1.017416166 1.254746837 1.353968361 1.220791304 1.028583406 1.431453923 0.901222954 1.022480248 1 13.85498596 -7.78747815 24.99997935 0.971388597 1.209882655 0.452167446 0.122620402 217.6447821 208958.8817 0.066661706 0.032040077 1.63E-08 7.78747815 0.238494058 NSDDAPWS(ph)PK ddPTM_A459_MK2206_30min_R2 2 NSDDAPWSPK 10 0 Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y3N9;Q9UPP1-5;H0Y589 Q9UPP1-4 PHF8 Histone lysine demethylase PHF8 1 NSDDAPWS(1)PK;NSDDAPWS(1)PK 111.66 0.0087123 26766700 221899 225222 232787 188775 186972 141330 286793 193050 146765 232965 TRUE FALSE 238887.7581 214037.803 240548.0024 173351.4786 179630.5398 146708.4122 249136.7346 218282.2978 159530.3544 225363.3711 1.060011469 0.949745302 1.067378435 0.769208757 0.797070699 0.650986056 1.10548903 0.968579307 0.707880582 1 17.78189352 -5.753527463 24.99990079 0.854990347 1.018115111 0.249100892 0.133980857 274.9162279 868664.463 0.037749545 0.063901428 1.76E-06 5.753527463 0.163124764 NSDGGS(ph)DPETQK ddPTM_A459_MK2206_30min_R1 1 NSDGGSDPETQK 12 0 O75554-2;O75554 O75554-2 WBP4 WW domain-binding protein 4 1 NSDGGS(0.999)DPETQK 93.243 0.022407 0 830.74 579.4 523.57 516.17 567.91 371.47 773.37 854.01 278.98 498.91 TRUE FALSE 760.0812006 541.6809547 488.0315271 555.9255028 545.2889421 392.5023104 721.7798984 846.5434806 307.9809693 560.7187374 1.355548067 0.966047536 0.870367788 0.991451624 0.972482112 0.699998563 1.287240554 1.509747087 0.549261062 1 9.131133471 -9.992480941 15.49824922 0.999982112 1.026581425 0.000387812 0.27862704 0 0 0.266307597 0.064589079 1.02E-10 9.992480941 0.026599313 NSDGGS(ph)DPETQK ddPTM_A459_MK2206_30min_R2 2 NSDGGSDPETQK 12 0 O75554-2;O75554 O75554-2 WBP4 WW domain-binding protein 4 1 NSDGGS(1)DPETQK;NSDGGS(1)DPETQK 177.93 0.00010371 14305200 72821 39702 49023 52705 60928 36297 59673 96654 61945 72530 TRUE FALSE 78396.23175 37730.45641 50657.40235 48398.83291 58535.66058 37678.30777 51837.86342 109287.0097 67332.86413 70163.35204 1.117338746 0.537751623 0.721992335 0.689802176 0.834276854 0.537008377 0.738816803 1.55760816 0.959658599 1 16.09843005 -7.671609586 11.05935985 1.193533495 0.724253188 0.457879304 0.215048155 0.313806409 36.27959656 0.094327313 0.054402264 2.13E-08 7.671609586 -0.469280307 NSDGGS(ph)DPETQKEK ddPTM_A459_MK2206_30min_R1 1 NSDGGSDPETQKEK 14 1 O75554-2;O75554 O75554-2 WBP4 WW domain-binding protein 4 1 NSDGGS(0.999)DPETQKEK 133.23 0.0050821 0 901.01 978.22 865.41 678.55 293.05 520.53 751.07 1015.4 134.09 426.24 TRUE FALSE 824.3743681 914.5377002 806.6683804 730.8120386 281.377198 550.0019588 700.9674907 1006.522465 148.0291353 479.0458291 1.720867437 1.909081855 1.683906489 1.525557669 0.587370103 1.148119711 1.463257684 2.101098483 0.309008296 1 8.904019871 -6.015116769 12.73668165 1.165985137 1.75514367 0.302846537 0.4571466 1.705250631 1436.902047 0.134725359 0.182430658 9.66E-07 6.015116769 0.589158533 NSDGGS(ph)DPETQKEK ddPTM_A459_MK2206_30min_R2 5 NSDGGSDPETQKEK 14 1 O75554-2;O75554 O75554-2 WBP4 WW domain-binding protein 4 1 NSDGGS(1)DPETQKEK;NSDGGS(1)DPETQKEK;NS(0.041)DGGS(0.955)DPET(0.004)QKEK;NSDGGS(1)DPETQKEK;NS(0.005)DGGS(0.892)DPET(0.103)QKEK 150.46 0.0019967 45738800 139611 144167.2 137957 124091 163051 91324 162548 156112 142304 176137 TRUE FALSE 150299.7255 137008.0665 142556.4175 113952.3684 156648.7985 94799.39881 141205.2523 176516.3744 154681.3447 170389.6641 0.882094147 0.804086722 0.836649443 0.668775122 0.919356226 0.556368247 0.828719589 1.035957054 0.907809435 1 17.3784783 -7.630213347 5.692579211 0.976699585 0.77632086 0.439633601 0.10255802 0.19156957 8.901211954 0.04785488 0.027087272 2.34E-08 7.630213347 -0.200378725 NSDGSYS(ph)VFWQQNQK ddPTM_A459_MK2206_30min_R1 1 NSDGSYSVFWQQNQK 15 0 A0A0G2JMS6;Q6IE36 A0A0G2JMS6 OVOS2 Ovostatin homolog 2 1 NSDGS(0.004)Y(0.419)S(0.577)VFWQQNQK 93.345 0.012569 6145200 436.94 429.91 341.61 308.24 374.4 357.29 670.69 266.86 349.29 401.72 TRUE FALSE 399.7759585 401.9227809 318.422465 331.9806982 359.4868552 377.519451 625.9494938 264.5268712 385.5999454 451.4881064 0.885462879 0.890217871 0.705273208 0.735303308 0.796226634 0.83616699 1.386414138 0.585899977 0.854064459 1 8.818544173 -7.019845581 24.93855969 0.949115452 0.800031925 0.128551549 0.190629219 1730.505069 2174600.621 0.073327676 0.057622456 9.55E-08 7.019845581 -0.149083527 NSDLLT(ph)SPDVGLLK ddPTM_A459_MK2206_30min_R1 3 NSDLLTSPDVGLLK 14 0 P05412 P05412 JUN Transcription factor AP-1 1 NS(0.025)DLLT(0.81)S(0.165)PDVGLLK;NS(0.01)DLLT(0.885)S(0.105)PDVGLLK;NS(0.075)DLLT(0.604)S(0.321)PDVGLLK 176.17 0.00016133 32575000 11552.8 12536.2 14125.5 14244.7 11647.8 10059.6 9898.29 11094.3 9345.7 8490.89 TRUE FALSE 10570.17369 11720.0911 13166.70042 15341.82926 11183.84346 10629.16586 9237.993135 10997.3037 10317.21896 9542.805556 1.10765892 1.228159898 1.379751514 1.60768541 1.17196598 1.113840767 0.968058406 1.152418295 1.081151544 1 13.22019776 -6.510004033 17.53148646 1.075146771 1.334833545 0.491483502 0.128090776 11.32076621 15415.90464 0.043677255 0.0470986 3.09E-07 6.510004033 0.259686774 NSDLLT(ph)SPDVGLLK ddPTM_A459_MK2206_30min_R2 2 NSDLLTSPDVGLLK 14 0 P05412 P05412 JUN Transcription factor AP-1 1 NS(0.004)DLLT(0.792)S(0.204)PDVGLLK;NSDLLT(0.889)S(0.111)PDVGLLK 137.79 0.001366 6756000 57465 65149 69716 64189 75282 51660 64099 44196 51293 52949 TRUE FALSE 61864.56458 61913.7954 72040.29664 58944.55337 72326.05042 53625.9575 55682.7243 49972.56895 55754.37242 51221.27847 1.207790325 1.208751465 1.406452529 1.150782548 1.412031339 1.046946876 1.087101415 0.975621274 1.088500211 1 15.64445564 -6.787698977 24.04163042 1.041076757 1.273522787 0.66564776 0.084148452 86.18446234 78904.20651 0.028055504 0.024751934 1.63E-07 6.787698977 0.232446029 NSESESNKVAAET(ph)QSPSLFGSTK ddPTM_A459_MK2206_30min_R1 1 NSESESNKVAAETQSPSLFGSTK 23 1 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 NSESESNKVAAET(0.365)QS(0.365)PS(0.264)LFGS(0.004)T(0.002)K 69.857 0.0036698 7490000 2998.6 2826.9 2856.3 3034 2277.2 1831.3 1849.9 2334 1368.6 1006.1 TRUE FALSE 2743.553324 2642.868296 2662.422314 3267.679206 2186.494302 1934.986623 1726.496546 2313.594084 1510.870868 1130.743264 2.426327365 2.33728414 2.354577206 2.889850694 1.933678822 1.711251958 1.526868744 2.046082571 1.336174989 1 10.14305569 -6.516744631 3.578524338 1.595813404 2.480252102 0.706417323 0.29420634 0.137326005 3.780427306 0.095519 0.101848263 3.04E-07 6.516744631 0.884438698 NSESESNKVAAETQS(ph)PSLFGSTK ddPTM_A459_MK2206_30min_R1 1 NSESESNKVAAETQSPSLFGSTK 23 1 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 NSESESNKVAAET(0.008)QS(0.804)PS(0.184)LFGS(0.003)T(0.001)K 86.304 0.00014142 5531700 3047.6 2780.4 2680.7 2668.6 2621.2 1755.1 1741.9 2233.9 1508.7 1104.9 TRUE FALSE 2788.385616 2599.395455 2498.741553 2874.136034 2516.792054 1854.472245 1625.701029 2214.369248 1665.534764 1241.783354 2.245468671 2.093276132 2.012220204 2.314522921 2.026756154 1.493394351 1.309166389 1.783217049 1.341244235 1 10.27819778 -6.738611603 3.684736432 1.419758645 2.152252842 0.787518964 0.196478423 0.106741152 3.083845087 0.06732345 0.063797605 1.83E-07 6.738611603 0.732494196 NSFLGS(ph)PR ddPTM_A459_MK2206_30min_R1 2 NSFLGSPR 8 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5;H0YES6;J3KNK0;Q8TDC3;Q8TDC3-2 Q8IWQ3-6 BRSK2;BRSK1 Serine/threonine-protein kinase BRSK2;Serine/threonine-protein kinase BRSK1 1 NSFLGS(1)PR;NSFLGS(1)PR 104.43 0.014609 30634000 11250.8 12280.7 12309.5 10556.6 10275 9141.1 10356.3 10187.6 10591 10475.1 TRUE FALSE 10293.86038 11481.2242 11473.96544 11369.67116 9865.724992 9658.661182 9665.450123 10098.53089 11691.97235 11772.83447 0.874374001 0.975230241 0.974613672 0.96575478 0.83800762 0.820419348 0.82099601 0.857782458 0.993131465 1 13.52317409 -4.450980334 14.93436114 0.907793942 0.478458685 0.01815435 0.071201067 3256947.172 15527581.23 0.019293387 43325544.41 3.54E-05 4.450980334 -0.429335257 NSFLGS(ph)PR ddPTM_A459_MK2206_30min_R2 1 NSFLGSPR 8 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5;H0YES6;J3KNK0;Q8TDC3;Q8TDC3-2 Q8IWQ3-6 BRSK2;BRSK1 Serine/threonine-protein kinase BRSK2;Serine/threonine-protein kinase BRSK1 1 NSFLGS(1)PR 84.31 0.036854 9242200 19866 22965 19992 21791 18897 17798 20200 16481 14210 20319 TRUE FALSE 21386.95623 21824.59149 20658.5233 20010.60559 18155.00883 18475.31536 17547.71574 18635.12329 15445.96011 19655.99269 1.088062891 1.110327615 1.051003815 1.018040956 0.923637341 0.939932958 0.892741263 0.948063198 0.785814299 1 14.26268161 -6.010439891 1.161511957 0.903987043 1.104563089 0.687412179 0.051997752 0.26401458 0.725095733 0.019022049 0.037055717 9.76E-07 6.010439891 0.200576046 NSFNNPAYYVLEGVPHQLLPPEPPS(ph)PAR ddPTM_A459_MK2206_30min_R1 1 NSFNNPAYYVLEGVPHQLLPPEPPSPAR 28 0 A0A0A0MTP6;O15357-2;O15357 A0A0A0MTP6 INPPL1 "Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2" 1 NSFNNPAYYVLEGVPHQLLPPEPPS(1)PAR 221.23 3.77E-45 4701700 962.99 739 853.76 475.76 788.78 804.31 886.11 589.24 676.41 597.51 TRUE FALSE 881.0826436 690.8909657 795.8091499 512.4031176 757.3612223 849.8493371 826.9992187 584.0883368 746.7252401 671.5340498 1.31204463 1.028824921 1.185061502 0.76303371 1.127807626 1.265534246 1.2315075 0.869782161 1.111969289 1 9.391316742 -7.758259493 24.99999175 0.993156811 1.119680927 0.137867509 0.154906257 186.5237297 1466472.854 0.078642594 0.042955554 1.74E-08 7.758259493 0.126524116 NSGEPLPPKPGPGS(ph)PSHPGALDLDGVSR ddPTM_A459_MK2206_30min_R1 1 NSGEPLPPKPGPGSPSHPGALDLDGVSR 28 1 A1X283;G3V144;A0A1B0GUF2 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B 1 NSGEPLPPKPGPGS(0.945)PS(0.055)HPGALDLDGVSR 87.352 1.11E-05 11248000 3690.1 3883.6 3616 3308.1 3333.2 3287 2915.7 3336.2 3249.1 3165.8 TRUE FALSE 3376.237618 3630.776934 3370.555995 3562.890435 3200.431586 3473.107099 2721.198973 3307.031955 3586.855572 3558.003205 0.948913597 1.020453531 0.947316739 1.001373588 0.899502165 0.976139396 0.764810714 0.929462894 1.008109146 1 11.79685209 -6.261736651 24.9920882 0.920224298 0.98013876 0.10548058 0.067831441 53.86657466 4528626.961 0.020681001 0.024952897 5.47E-07 6.261736651 0.059914462 NSGEPLPPKPGPGS(ph)PSHPGALDLDGVSR ddPTM_A459_MK2206_30min_R2 2 NSGEPLPPKPGPGSPSHPGALDLDGVSR 28 1 A1X283;G3V144;A0A1B0GUF2 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B 1 NSGEPLPPKPGPGS(0.623)PS(0.372)HPGALDLDGVS(0.004)R;NSGEPLPPKPGPGS(0.981)PS(0.018)HPGALDLDGVSR 75.103 5.71E-05 22932000 64608 77274 73828 65900 64431 55900 74985 59675 54435 73817 TRUE FALSE 69554.43816 73436.68553 76289.38867 60515.7592 61901.1152 58027.31367 65139.37943 67474.72739 59169.6579 71408.35734 0.974037784 1.028404633 1.068353783 0.847460458 0.866860932 0.812612359 0.912209465 0.944913592 0.828609705 1 16.12380531 -5.763760649 24.99985561 0.882274821 1.024079334 0.544670596 0.056872193 42.82691728 461250.1207 0.015578406 0.024406701 1.72E-06 5.763760649 0.141804513 NSGEPLPPKPGPGSPS(ph)HPGALDLDGVSR ddPTM_A459_MK2206_30min_R2 1 NSGEPLPPKPGPGSPSHPGALDLDGVSR 28 1 A1X283;G3V144;A0A1B0GUF2 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B 1 NSGEPLPPKPGPGS(0.414)PS(0.585)HPGALDLDGVS(0.001)R 71.524 0.00020075 5465700 40468 42052 39469 43955 47738 38917 48562 37318 39315 50057 TRUE FALSE 43566.26119 39963.75883 40784.87676 40363.73589 45863.56626 40398.01371 42185.75107 42195.59073 42734.54763 48423.64419 0.89968985 0.825294327 0.842251289 0.833554281 0.947131655 0.834262154 0.871180841 0.871384041 0.882514077 1 15.56342404 -14.52287875 0.258720634 1.862061221 0.855300098 0.574258937 0.0345968 138.2355378 1.357867723 63.23680996 0.045893215 3.00E-15 14.52287875 -1.006761124 NSGSDGSPS(ph)PLLAR ddPTM_A459_MK2206_30min_R2 2 NSGSDGSPSPLLAR 14 0 Q9HCH0;H7C1V4;Q9HCH0-2 Q9HCH0 NCKAP5L Nck-associated protein 5-like 1 NSGSDGS(0.005)PS(0.995)PLLAR;NS(0.002)GS(0.019)DGS(0.016)PS(0.963)PLLAR 123.76 0.0015814 14568400 49001 55418 55791 57347 54874 56771 72532 48278 48730 53489 TRUE FALSE 52752.55424 52666.02271 57651.04409 52661.56666 52719.37104 58931.46019 63008.46127 54588.10036 52968.44732 51743.65831 1.019497963 1.017825651 1.114166373 1.017739533 1.018856663 1.138911745 1.21770403 1.0549718 1.023670321 1 15.65909444 -6.74948706 24.89055424 1.0986531 1.039666114 0.118188641 0.063564656 415.6446326 865573.8581 0.022046233 0.021878542 1.78E-07 6.74948706 -0.058986985 NSGSFPS(ph)PSIS(ph)PR ddPTM_A459_MK2206_30min_R2 1 NSGSFPSPSISPR 13 0 Q9ULD2;Q9ULD2-4;Q9ULD2-7;Q9ULD2-3;Q9ULD2-6;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 2 NSGSFPS(0.972)PS(0.027)IS(1)PR 153.48 0.0074725 12921000 94399 106500 97579 113300 99515 88153 117570 93943 78299 107950 TRUE FALSE 101626.26 101211.3649 100832.2352 104043.0276 95607.54108 91507.72419 102132.9178 106221.6727 85109.30549 104427.6003 0.97317433 0.969201289 0.965570738 0.996317326 0.915539003 0.876279105 0.978026091 1.017180059 0.815007768 1 16.67214354 -6.264123519 24.95200513 0.933879067 0.974825934 0.119860093 0.056237351 556.0355161 5168953.39 0.016959363 0.020166905 5.44E-07 6.264123519 0.040946867 NSGSFPSPSIS(ph)PR ddPTM_A459_MK2206_30min_R1 1 NSGSFPSPSISPR 13 0 Q9ULD2;Q9ULD2-4;Q9ULD2-7;Q9ULD2-3;Q9ULD2-6;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 NSGSFPSPSIS(1)PR 166.79 0.0003229 31518000 3870.2 4367.1 4509.4 3622.8 4319.5 3370.9 4106 4528.1 4731 4210.9 TRUE FALSE 3541.019167 4082.800996 4203.314492 3901.828684 4147.445168 3561.757445 3832.096232 4488.511299 5222.80438 4732.578083 0.748222027 0.862701243 0.888165904 0.824461555 0.876360642 0.752604053 0.809726995 0.948428366 1.103585464 1 12.20841059 -7.962315703 3.631934801 1.048794326 0.82705449 0.77139506 0.050385034 0.105513125 2.885440979 0.033560975 0.013619624 1.09E-08 7.962315703 -0.221739837 NSGSFPSPSIS(ph)PR ddPTM_A459_MK2206_30min_R2 4 NSGSFPSPSISPR 13 0 Q9ULD2;Q9ULD2-4;Q9ULD2-7;Q9ULD2-3;Q9ULD2-6;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 NSGSFPSPSIS(1)PR;NSGSFPSPS(0.002)IS(0.998)PR;NSGSFPSPSIS(1)PR;NSGSFPSPSIS(1)PR 178.47 0.00010683 149363000 124947 161669 136259 159156 128952 134447 188647 164129 142219 168188 TRUE FALSE 134513.0384 153640.7525 140801.8071 146152.4457 123888.6965 139563.4748 163877.4223 185581.2238 154588.9515 162700.0393 0.826754799 0.944319087 0.865407333 0.898293856 0.76145462 0.857796196 1.007236525 1.140634167 0.950146983 1 17.31185507 -7.311798953 4.651019032 1.039800838 0.860209947 0.623493242 0.06289675 0.136389263 6.546934377 0.026771509 0.018030767 4.88E-08 7.311798953 -0.179590891 NSGTQS(ph)DGEEKQPGLVMER ddPTM_A459_MK2206_30min_R1 1 NSGTQSDGEEKQPGLVMER 19 1 J3QRV5;Q6P1M3;Q6P1M3-2 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 NS(0.008)GT(0.118)QS(0.873)DGEEKQPGLVMER 58.339 0.025737 15693000 2412.4 2225.3 2466.2 2101.4 1858.9 1828.1 2149.5 2245.4 2458.7 2184 TRUE FALSE 2207.212712 2080.432566 2298.801215 2263.250192 1784.856077 1931.605442 2006.110777 2225.768705 2714.290664 2454.570408 0.899225667 0.847575021 0.936539122 0.922055519 0.727156194 0.786942365 0.817296082 0.906785439 1.10581088 1 11.26125484 -8.095299691 4.385108541 1.049509772 0.847935041 0.612135929 0.064185016 0.163493844 5.26460945 0.050759976 0.018093008 8.03E-09 8.095299691 -0.201574731 NSITEIS(ph)DNEDDLLEYHR ddPTM_A459_MK2206_30min_R1 3 NSITEISDNEDDLLEYHR 18 0 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 NSITEIS(1)DNEDDLLEYHR;NSITEIS(1)DNEDDLLEYHR;NS(0.002)IT(0.003)EIS(0.996)DNEDDLLEYHR 168.86 7.11E-08 3737900 2464.75 2462.7 2822.92 1910.1 2249.21 2160.29 2824.25 2282.74 2588.91 2457.09 TRUE FALSE 2255.11007 2302.377782 2631.308056 2057.216233 2159.619203 2282.603753 2635.849436 2262.782245 2858.036459 2761.492859 0.816627159 0.833743884 0.952857092 0.744965255 0.782047723 0.826583254 0.95450163 0.81940543 1.034960655 1 11.43123268 -8.109524909 1.169268964 1.016989443 0.831705532 0.482093534 0.068144953 0.420461891 1.075877191 0.063532494 0.021507517 7.77E-09 8.109524909 -0.18528391 NSITEIS(ph)DNEDDLLEYHR ddPTM_A459_MK2206_30min_R2 1 NSITEISDNEDDLLEYHR 18 0 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 NSITEIS(1)DNEDDLLEYHR 126.55 0.00056846 0 5302.2 5141.2 4955.3 6124.5 4570.3 5015.4 6483.2 3670.9 4186.2 4161.6 TRUE FALSE 5708.140509 4885.895484 5120.507229 5624.108759 4390.847058 5206.264561 5631.948052 4150.699234 4550.308109 4025.807333 1.417887156 1.213643645 1.271920588 1.397013889 1.090674912 1.293222485 1.398961149 1.031022821 1.130284619 1 11.97506241 -7.774203487 24.99996662 1.060490195 1.289094117 0.566454418 0.09750832 182.4345712 357313.5987 0.051958901 0.025215058 1.68E-08 7.774203487 0.228603921 NSKPS(ph)PVDSNR ddPTM_A459_MK2206_30min_R2 1 NSKPSPVDSNR 11 1 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 NS(0.002)KPS(0.955)PVDS(0.043)NR 114.21 0.031592 912980 3626.9 4413.6 4465.5 4827.6 5897.1 3099.7 4615.7 4415 3573.9 3984.6 TRUE FALSE 3904.578253 4194.427042 4614.377541 4433.169637 5665.550223 3217.661256 4009.653046 4992.055659 3884.751362 3854.582828 1.012970385 1.088166276 1.197114642 1.150103613 1.469821891 0.834762515 1.040230091 1.295096222 1.007826666 1 11.91235901 NSKYEYDPDIS(ph)PPR ddPTM_A459_MK2206_30min_R2 2 NSKYEYDPDISPPR 14 1 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 NSKYEYDPDIS(1)PPR;NSKYEYDPDIS(1)PPR 127.05 0.0059238 14648000 53150.8 126040 94934 114289 149152 110913 134400 88508 130606 83169 TRUE FALSE 57220.06611 119781.0369 98099.05218 104951.2231 143295.5431 115133.8719 116753.1186 100076.2995 141965.8738 80455.20234 0.711204055 1.488791693 1.219300298 1.304467829 1.781060005 1.431030792 1.451156857 1.243876053 1.764533177 1 16.29589809 -4.758128858 24.98841371 1.421360713 0.711203064 0.458662938 0.227204154 80.93131552 610784.9315 0.053795645 0.377719248 1.75E-05 4.758128858 -0.710157649 NSLDASRPAGLSPTLT(ph)PGER ddPTM_A459_MK2206_30min_R1 1 NSLDASRPAGLSPTLTPGER 20 1 A0A075B6E4;A0A0A6YYI5;G5E9M7;Q14135-2;Q14135;Q14135-4;F8W708;E7ERW0;E7EQU6;E7EWF5;G5E9M9;Q14135-5;Q14135-6 A0A075B6E4 VGLL4 Transcription cofactor vestigial-like protein 4 1 NSLDAS(0.022)RPAGLS(0.173)PT(0.215)LT(0.59)PGER 92.671 0.014154 8805400 1340.1 1824.7 1522.7 1543.6 1613.7 1111.8 1091.8 1318.5 1139.7 970.73 TRUE FALSE 1226.117458 1705.911698 1419.343366 1662.488339 1549.422912 1174.749155 1018.968014 1306.972494 1258.175893 1090.991361 1.123856248 1.56363447 1.300966641 1.523832726 1.420197233 1.076772188 0.933983577 1.197967775 1.153240931 1 10.09142396 -6.763770718 24.98816754 1.076115245 1.39921646 0.583726187 0.132389863 42.53970734 455952.2244 0.044096988 0.040754369 1.72E-07 6.763770718 0.323101215 NSLES(ph)YAFNMK ddPTM_A459_MK2206_30min_R2 1 NSLESYAFNMK 11 0 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PM13;E9PS65 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 NSLES(1)YAFNMK 85.271 0.042392 0 24082 23749 17972 21649 20251 18563 23755 16412 17593 19419 TRUE FALSE 25925.73644 22569.65919 18571.17751 19880.20745 19455.84399 19269.42797 20635.93997 18557.10475 19123.20734 18785.35962 1.38010328 1.201449408 0.988598456 1.058281973 1.035691857 1.025768384 1.09851184 0.987849321 1.017984629 1 14.19732111 -4.956175007 2.572762825 1.030126942 1.396882819 0.916839508 0.033829686 0.088224878 0.986855968 0.008870021 0.060152034 1.11E-05 4.956175007 0.366755877 NSLESIS(ph)SIDR ddPTM_A459_MK2206_30min_R2 1 NSLESISSIDR 11 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 NSLES(0.009)IS(0.495)S(0.495)IDR 78.287 0.047867 2545600 21750 9215.2 12612 14052 9615.6 10102 12953 9884 11817 11042 TRUE FALSE 23415.19672 8757.586568 13032.47779 12903.90665 9238.043229 10486.43869 11252.25554 11175.87274 12844.8213 10681.70044 2.192085131 0.819868205 1.220075198 1.208038619 0.864847622 0.981719975 1.053414257 1.046263448 1.202507163 1 13.38285371 -4.754383411 24.99999466 1.048892565 2.192087106 0.873667285 0.130951701 80.81657005 286316.3262 0.03252933 0.319241896 1.76E-05 4.754383411 1.14319454 NSLESISS(ph)IDR ddPTM_A459_MK2206_30min_R2 2 NSLESISSIDR 11 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 NS(0.007)LES(0.066)IS(0.262)S(0.666)IDR;NSLES(0.001)IS(0.23)S(0.77)IDR 122.52 0.0034103 0 34725 25389 24813.7 23351.5 15427.8 18083.3 24639.8 17831 15578.7 18468.2 TRUE FALSE 37383.5727 24128.21918 25640.97637 21443.60775 14822.02705 18771.47265 21404.56466 20161.57292 16933.70717 17865.58415 2.092490925 1.350541856 1.435216233 1.20027465 0.829641333 1.050705787 1.19808927 1.128514621 0.947839546 1 14.12489547 -1.522878745 0.681402226 1.043878553 113.6086156 0.848017847 0.131468646 98.6164094 0.563686056 0.055362101 16855.30689 0.03 1.522878745 112.564737 up NSLLAGGDDDTMSVIS(ph)GISSR ddPTM_A459_MK2206_30min_R1 2 NSLLAGGDDDTMSVISGISSR 21 0 Q8N3U4;Q8N3U4-2 Q8N3U4 STAG2 Cohesin subunit SA-2 1 NSLLAGGDDDTMSVIS(0.979)GIS(0.019)S(0.002)R;NSLLAGGDDDTMSVIS(0.997)GIS(0.003)SR 298.96 1.98E-101 15339900 1661.19 2132.7 1951.39 1550.2 1569.9 1652.8 1745.14 1565.63 1620.52 1408.47 TRUE FALSE 1519.897067 1993.860842 1818.935084 1669.596673 1507.367559 1746.380108 1628.724895 1551.941862 1788.978853 1582.961897 0.960160235 1.259576018 1.149070668 1.054729539 0.952245004 1.10323572 1.028909728 0.980403802 1.130146504 1 10.62841081 -5.842070543 5.171523264 1.032529878 1.136348781 0.180821293 0.084434743 0.290425938 13.40678922 0.023007837 0.035113956 1.44E-06 5.842070543 0.103818903 NSLLAGGDDDTMSVISGIS(ph)SR ddPTM_A459_MK2206_30min_R1 2 NSLLAGGDDDTMSVISGISSR 21 0 Q8N3U4;Q8N3U4-2 Q8N3U4 STAG2 Cohesin subunit SA-2 1 NSLLAGGDDDTMSVIS(0.004)GIS(0.968)S(0.028)R;NSLLAGGDDDTMSVISGIS(0.884)S(0.116)R 238.04 6.08E-31 4788700 2215.32 2407.62 2094.86 2342.8 2393.5 2109.72 2076.59 2085.99 2287.79 1945.63 TRUE FALSE 2026.895401 2250.8835 1952.66674 2523.242862 2298.161827 2229.170523 1938.06447 2067.752409 2525.613957 2186.669333 0.926932742 1.029366199 0.892986749 1.153920633 1.050987359 1.019436496 0.88630889 0.945617327 1.155004975 1 11.09451936 NSLLAGGDDDTMSVISGIS(ph)SR ddPTM_A459_MK2206_30min_R2 1 NSLLAGGDDDTMSVISGISSR 21 0 Q8N3U4;Q8N3U4-2 Q8N3U4 STAG2 Cohesin subunit SA-2 1 NSLLAGGDDDTMSVIS(0.01)GIS(0.847)S(0.142)R 110.4 0.00048086 0 3935.6 4721.3 2959.5 4157.1 3552.7 4428.8 4675.6 4338.9 3165.3 3791.4 TRUE FALSE 4236.912562 4486.847107 3058.168253 3817.451632 3413.203147 4597.341087 4061.688104 4906.009128 3440.612072 3667.686929 1.15520017 1.223345175 0.833813876 1.040833557 0.930614639 1.253471514 1.107424975 1.337630289 0.938087721 1 11.84065478 -6.761180952 24.99999988 1.147181159 1.036078616 0.07905805 0.146917143 15.91040931 1539210.978 0.049669856 0.046741847 1.73E-07 6.761180952 -0.111102544 NSMFHNR ddPTM_A459_MK2206_30min_R2 1 NSMFHNR 7 0 E9PKG1;Q99873-2;Q99873-3;Q99873;E9PNR9;E9PQ98;E9PIX6;H0YDE4;Q99873-5;E9PMZ2;E9PMW9 E9PKG1 PRMT1 Protein arginine N-methyltransferase 1 0 94.302 0.034526 1889600 11597 19878 14896 24329 31227 32310 31582 19586 25819 17611 FALSE TRUE 12484.87524 18890.88743 15392.62521 22341.24288 30000.87108 33539.57969 27435.24546 22145.95745 28064.68995 17036.35451 0.732837253 1.10885738 0.903516371 1.311386357 1.760991241 1.968706372 1.610394139 1.299923492 1.647341274 1 14.05632904 -5.935747734 3.48811989 1.585815621 0.934609039 0.535104663 0.261452182 0.178709583 4.415353102 0.077394739 0.11815419 1.16E-06 5.935747734 -0.651206582 NSNLVGAAHEELQQSR ddPTM_A459_MK2206_30min_R1 1 NSNLVGAAHEELQQSR 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 116.04 0.0027431 17754000 1302.6 1344.7 1486.3 1452.3 1504 1193.7 1276.5 1067.2 1406.5 1067.4 FALSE TRUE 1191.80703 1257.159786 1385.414097 1564.156398 1444.092495 1261.286262 1191.347014 1057.869583 1552.710708 1199.63757 0.993472578 1.047949661 1.154860544 1.303857462 1.203773982 1.051389431 0.993089116 0.881824318 1.294316506 1 10.2283829 -6.892626596 6.718821922 1.031152767 1.145099115 0.128016261 0.124576451 0.436935293 24.5121537 0.045875699 0.040458214 1.28E-07 6.892626596 0.113946348 NSNLVGAAHEELQQSR ddPTM_A459_MK2206_30min_R2 2 NSNLVGAAHEELQQSR 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 186.96 1.18E-06 26645000 54423 91033 71475 87518 94094 88280 84188 68281 82249 69751 FALSE TRUE 58589.66672 86512.43359 73857.94083 80367.49944 90399.39678 91639.55726 73134.01447 77205.56114 89402.86935 67475.03058 0.868316268 1.282139969 1.094596626 1.191070219 1.339745918 1.358125465 1.083867823 1.144209354 1.324977085 1 16.04206611 -4.753780058 24.99908727 1.208369153 0.86831566 0.425287309 0.116191476 269.1087965 878266.6343 0.028657033 0.298589749 1.76E-05 4.753780058 -0.340053493 NSNPVIAELSQAINSGTLLSKPS(ph)PPLPPKR ddPTM_A459_MK2206_30min_R1 2 NSNPVIAELSQAINSGTLLSKPSPPLPPKR 30 2 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 NSNPVIAELSQAINS(0.001)GT(0.008)LLS(0.021)KPS(0.971)PPLPPKR;NSNPVIAELS(0.003)QAINS(0.033)GT(0.063)LLS(0.016)KPS(0.884)PPLPPKR 95.287 3.93E-08 30505000 3081.78 3165.92 3226.81 3212.76 2674.19 2168.9 2694.11 2752.12 3051.83 3147.81 TRUE FALSE 2819.658428 2959.818033 3007.783128 3460.207332 2567.67135 2291.701244 2514.390838 2728.058505 3369.07865 3537.784468 0.797012496 0.8366304 0.850188347 0.978071831 0.725785127 0.647778649 0.710724709 0.771120607 0.952313144 1 11.78863044 -10.8411044 7.525306607 1.000001453 0.803799282 0.256832766 0.097909445 2.59E-06 2.35E-07 0.103027642 0.024987689 1.44E-11 10.8411044 -0.19620217 NSNS(ph)PPS(ph)PSSMNQR ddPTM_A459_MK2206_30min_R1 2 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 2 NS(0.301)NS(0.699)PPS(0.978)PS(0.018)S(0.004)MNQR;NS(0.001)NS(0.999)PPS(0.998)PS(0.001)S(0.001)MNQR 149.6 0.0079525 11025200 3573.6 3138.4 3571.9 2951.3 3071.6 3151.4 3538.3 2991.9 3036.2 3041.4 TRUE FALSE 3269.646554 2934.08959 3329.44938 3178.609637 2949.251668 3329.829545 3302.266463 2965.742134 3351.823855 3418.191593 0.956542799 0.858374819 0.974038256 0.929909735 0.86281052 0.974149475 0.96608583 0.867634845 0.980583962 1 11.73901755 -8.499980688 20.13665098 1.000000016 0.924444498 0.275820047 0.04372137 66.8351524 58774.29434 0.040706098 0.010510633 3.16E-09 8.499980688 -0.075555518 NSNS(ph)PPS(ph)PSSMNQR ddPTM_A459_MK2206_30min_R2 1 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 2 NS(0.015)NS(0.985)PPS(0.887)PS(0.105)S(0.009)MNQR 162.76 0.0049716 17251000 24189 26902 25478 31335 24023 20478 29526 23298 18636 27348 TRUE FALSE 26040.92844 25566.0858 26327.4238 28774.83026 23079.73631 21257.30464 25649.20073 26343.12859 20256.92559 26455.637 0.984324378 0.966375741 0.995153653 1.087663482 0.872393899 0.803507572 0.969517413 0.99574728 0.765694116 1 14.69128753 -6.282547025 24.5704779 0.89946765 1.004434379 0.310936879 0.078093706 840.5437258 978437.1014 0.024384202 0.027679209 5.22E-07 6.282547025 0.104966729 NSNS(ph)PPSPSSMNQR ddPTM_A459_MK2206_30min_R1 3 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 NSNS(1)PPSPSSMNQR;NSNS(0.999)PPSPSSMNQR;NSNS(0.837)PPS(0.114)PS(0.017)S(0.032)MNQR 246.75 2.81E-27 80599900 46264.2 27737.8 27022.6 23939.05 16687.4 19691.35 35652.7 37622.98 7907.5 23944.9 TRUE FALSE 42329.18685 25932.06418 25188.3812 25782.83978 16022.70552 20806.25722 33274.37344 37294.04625 8729.512922 26911.37499 1.572910595 0.963609782 0.93597526 0.958064751 0.595387844 0.77313988 1.236442711 1.385809765 0.324380041 1 14.71592848 -4.758536048 4.507360537 0.915267199 1.630151879 0.331559554 0.283847717 0.259140885 11.58655609 0.071456592 0.605844342 1.74E-05 4.758536048 0.71488468 NSNS(ph)PPSPSSMNQR ddPTM_A459_MK2206_30min_R2 2 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 NSNS(0.998)PPS(0.001)PSSMNQR;NS(0.001)NS(0.994)PPS(0.001)PS(0.002)S(0.002)MNQR 119.62 0.008295 8567500 22459 29076 25218 27749 22290 20344 24331 22063.9 19968.9 24635 TRUE FALSE 24178.47831 27632.12812 26058.75553 25481.81794 21414.7826 21118.20518 21136.31047 24947.72749 21705.75883 23831.16197 1.014574041 1.159495628 1.09347398 1.069264603 0.898604215 0.886159273 0.886919006 1.046853172 0.91081412 1 14.54056168 -6.172684868 5.072071815 0.935635347 1.093351754 0.599611388 0.05842328 0.152915725 6.544980171 0.017707495 0.023041232 6.72E-07 6.172684868 0.157716407 NSNSPPS(ph)PSSMNQR ddPTM_A459_MK2206_30min_R1 4 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 NSNS(0.107)PPS(0.871)PS(0.018)S(0.005)MNQR;NSNS(0.018)PPS(0.848)PS(0.087)S(0.047)MNQR;NSNS(0.001)PPS(0.497)PS(0.497)S(0.004)MNQR;NSNS(0.007)PPS(0.904)PS(0.085)S(0.004)MNQR 225.31 1.01E-09 74081300 4101.92 4657.61 4103.43 3757.77 4237.38 3582.63 4019.55 3866.77 3498.2 3759.31 TRUE FALSE 3753.030164 4354.398742 3824.900604 4047.194097 4068.596182 3785.475415 3751.413154 3832.963238 3861.850408 4225.041704 0.888282395 1.030616748 0.905292982 0.957906307 0.962971839 0.895961668 0.887899674 0.907201279 0.914038412 1 12.04474987 -6.756129263 24.9825327 0.913150253 0.951612605 0.071193748 0.045911458 253.2131485 1191295.014 0.014430145 0.014019456 1.75E-07 6.756129263 0.038462352 NSNSPPS(ph)PSSMNQR ddPTM_A459_MK2206_30min_R2 8 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 NSNS(0.018)PPS(0.943)PS(0.019)S(0.019)MNQR;NS(0.221)NS(0.052)PPS(0.712)PS(0.011)S(0.003)MNQR;NSNS(0.05)PPS(0.711)PS(0.189)S(0.05)MNQR;NSNSPPS(0.981)PS(0.015)S(0.005)MNQR;NSNS(0.004)PPS(0.663)PS(0.291)S(0.042)MNQR;NSNS(0.001)PPS(0.431)PS(0.284)S(0.284)MNQR;NSNS(0.022)PPS(0.942)PS(0.03)S(0.005)MNQR;NSNS(0.005)PPS(0.477)PS(0.107)S(0.412)MNQR 185.74 8.04E-05 125988000 221803.7 189572.8 178549.9 215253.5 224303.9 185159.5 260392.7 413070.4 272515.6 254108.4 TRUE FALSE 238785.1618 180158.8904 184502.6646 197666.6005 215496.6018 192205.8745 226202.8257 467060.1196 296218.5143 245816.8637 0.97139455 0.732898824 0.750569598 0.8041214 0.876655078 0.781906789 0.920208737 1.900032864 1.2050374 1 17.90722437 -7.579256242 12.09250157 1.414288599 0.817447877 0.550464478 0.22172966 0.501651437 106.1581174 0.096519518 0.055702926 2.63E-08 7.579256242 -0.596840722 NSNSPPSPS(ph)SMNQR ddPTM_A459_MK2206_30min_R2 4 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 NSNSPPS(0.017)PS(0.491)S(0.491)MNQR;NS(0.001)NS(0.346)PPS(0.171)PS(0.375)S(0.107)MNQR;NSNS(0.004)PPS(0.077)PS(0.907)S(0.012)MNQR;NSNSPPS(0.295)PS(0.352)S(0.352)MNQR 215.37 4.48E-07 99534500 796602.6 547149.5 578000.6 598552.4 786880.7 589308.1 899638.2 2113040.4 1290213.2 798609.9 TRUE FALSE 857591.1075 519978.8515 597270.8515 549648.7542 755983.81 611734.6327 781514.6237 2389222.035 1402433.612 772551.3244 1.110076548 0.673067064 0.773114786 0.711472153 0.978554804 0.791836883 1.011602206 3.092638586 1.815327432 1 19.55927126 -7.601028317 10.07948403 2.08878038 0.835562121 0.513620995 0.491081444 0.251189959 30.46829593 0.21491971 0.12389724 2.51E-08 7.601028317 -1.253218259 NSPAS(ph)PLK ddPTM_A459_MK2206_30min_R1 2 NSPASPLK 8 0 O43572;E7EMD6 O43572 AKAP10 "A-kinase anchor protein 10, mitochondrial" 1 NS(0.001)PAS(0.999)PLK;NSPAS(1)PLK 112.64 0.011085 23430000 10415.3 11581.6 10894.8 8576.4 6143.4 6108.7 9140.8 7735.9 11503 14504.4 TRUE FALSE 9529.424042 10827.63573 10155.29133 9236.955814 5898.695369 6454.569315 8531.03391 7668.265842 12698.77801 16301.31457 0.584580096 0.664218563 0.622973766 0.566638707 0.361853968 0.395953914 0.523334107 0.470407819 0.77900331 1 13.99270069 -8.493559386 3.210550936 0.998245007 0.524020947 0.742906376 0.090556492 0.12354224 2.971902288 0.100630617 0.026745051 3.21E-09 8.493559386 -0.47422406 NSPAS(ph)PLK ddPTM_A459_MK2206_30min_R2 1 NSPASPLK 8 0 O43572;E7EMD6 O43572 AKAP10 "A-kinase anchor protein 10, mitochondrial" 1 NS(0.014)PAS(0.986)PLK 89.356 0.029782 16022000 148690 92076 117720 98803 108430 54116 130540 84534 56586 132380 TRUE FALSE 160073.8207 87503.63973 121644.726 90730.47884 104172.4934 56175.4223 113399.9412 95582.88405 61507.748 128060.4514 1.249986385 0.683299479 0.949900806 0.708497259 0.813463425 0.438663316 0.88551883 0.746388779 0.480302445 1 16.96646548 -2.959617388 1.654819659 0.73284092 199.9999942 0.41044395 0.176749363 513.5794994 4.693889963 0.046265893 385709.3261 0.001097445 2.959617388 199.2671533 NSPAS(ph)PLKELSGK ddPTM_A459_MK2206_30min_R1 2 NSPASPLKELSGK 13 1 O43572;E7EMD6 O43572 AKAP10 "A-kinase anchor protein 10, mitochondrial" 1 NS(0.001)PAS(0.934)PLKELS(0.066)GK;NS(0.02)PAS(0.971)PLKELS(0.01)GK 130.64 0.0076162 25303000 4280.5 4519.6 4699.7 4637.4 3355.4 2931.8 3606.6 4272.4 3654.2 2795.6 TRUE FALSE 3916.420997 4225.373219 4380.697458 4994.573352 3221.747313 3097.795982 3366.010295 4235.046857 4034.067167 3141.940034 1.246497691 1.344829364 1.394265139 1.589646301 1.025400637 0.985950066 1.071315894 1.347908239 1.283941489 1 11.61743993 -6.274951552 24.96602682 1.127436157 1.39034358 0.493509496 0.136169403 758.6034561 1401645.472 0.046364147 0.052870748 5.31E-07 6.274951552 0.262907423 NSPAS(ph)PLKELSGK ddPTM_A459_MK2206_30min_R2 1 NSPASPLKELSGK 13 1 O43572;E7EMD6 O43572 AKAP10 "A-kinase anchor protein 10, mitochondrial" 1 NS(0.001)PAS(0.999)PLKELSGK 79.744 0.021155 24649000 73414 80222 84981 69555 91677 61555 94323 59372 71157 83095 TRUE FALSE 79034.63229 76238.29213 87814.22413 63872.134 88077.30034 63897.51866 81938.2768 67132.12425 77346.10724 80383.61696 0.983218164 0.948430725 1.092439323 0.794591441 1.095712083 0.794907235 1.019340506 0.835146847 0.962212328 1 16.29461387 -5.739330281 24.9998884 0.927118162 1.002069436 0.117042446 0.099183302 526.5200333 595358.4471 0.024634726 0.042624963 1.82E-06 5.739330281 0.074951275 NSPAT(ph)LFEVPDTW ddPTM_A459_MK2206_30min_R1 2 NSPATLFEVPDTW 13 0 O95453;O95453-3;O95453-2;A0A494C0W0;A0A494C0K5;A0A494C0Q6;O95453-4 O95453 PARN Poly(A)-specific ribonuclease PARN 1 NS(0.001)PAT(0.999)LFEVPDTW;NS(0.104)PAT(0.896)LFEVPDTW 228.8 1.26E-12 4589200 1199.41 1038.18 1312.77 776.34 670.32 943.18 987.54 814.87 1361.39 1131.41 TRUE FALSE 1097.393881 970.5942933 1223.66283 836.1338413 643.619735 996.5820365 921.6630085 807.7456775 1502.911362 1271.577613 0.863017617 0.763299294 0.962318633 0.657556277 0.506158436 0.783736696 0.724818524 0.635231125 1.181926567 1 10.31240381 -8.262420538 24.99970479 1.090963309 0.736209919 0.562049074 0.124973281 66.88795661 1704160.882 0.104754201 0.032991493 5.46E-09 8.262420538 -0.35475339 NSPAT(ph)PPNTLNLR ddPTM_A459_MK2206_30min_R2 1 NSPATPPNTLNLR 13 0 Q92870-2;H0YAJ5;G5E9Y1;Q92870;Q92870-4;D6RDY3;D6RB00;D6RB55 Q92870-2 APBB2 Amyloid beta A4 precursor protein-binding family B member 2 1 NS(0.004)PAT(0.766)PPNT(0.23)LNLR 148.18 0.0012941 5895500 24934 30080 26285 35921 33401 33084 31750 26830 30682 30407 TRUE FALSE 26842.96621 28586.27094 27161.32878 32986.13939 32089.50891 34343.0348 27581.18686 30336.77312 33350.6649 29414.82208 0.912565989 0.971832189 0.923389192 1.121412168 1.0909299 1.167541816 0.937662883 1.031343077 1.133804747 1 14.84425569 -5.751734039 24.99096893 1.069815061 0.939519393 0.465603333 0.065270616 188.3194232 484912.1505 0.018226892 0.031070104 1.77E-06 5.751734039 -0.130295669 NSPATPPNT(ph)LNLR ddPTM_A459_MK2206_30min_R2 1 NSPATPPNTLNLR 13 0 Q92870-2;H0YAJ5;G5E9Y1;Q92870;Q92870-4;D6RDY3;D6RB00;D6RB55 Q92870-2 APBB2 Amyloid beta A4 precursor protein-binding family B member 2 1 NSPAT(0.119)PPNT(0.881)LNLR 134.02 0.002955 5141000 25524 42391 32291 39799 32461 42645 31810 29917 37916 31695 TRUE FALSE 27478.13706 40285.92458 33367.56582 36547.29439 31186.41804 44267.88536 27633.30879 33827.25462 41213.86514 30660.79475 0.896197809 1.313923038 1.088281178 1.191987836 1.017143172 1.443794452 0.901258725 1.103273901 1.344187764 1 14.90410747 -4.735986021 24.44275278 1.154915278 0.896196195 0.18913448 0.161357244 3136.553448 3011810.613 0.037752589 2.650339504 1.84E-05 4.735986021 -0.258719083 NSPEDLGLS(ph)LTGDSCK ddPTM_A459_MK2206_30min_R2 3 NSPEDLGLSLTGDSCK 16 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 NS(0.305)PEDLGLS(0.649)LT(0.045)GDSCK;NS(0.468)PEDLGLS(0.513)LT(0.019)GDSCK;NS(0.086)PEDLGLS(0.457)LT(0.457)GDSCK 120.55 0.0015952 32963800 114189.1 135453 129329.5 128976 128814 96942.3 144941 119254.9 114285.4 134504 TRUE FALSE 122931.5053 128726.601 133641.281 118438.2482 123756.1151 100631.5072 125910.0726 134841.9249 124225.7375 130115.1455 0.94479013 0.989328341 1.027100116 0.910257202 0.95112767 0.773403486 0.967681911 1.036327665 0.954736953 1 16.98942938 -7.520695026 24.98694726 0.997720358 0.933621652 0.167911401 0.064677435 172.6502402 1975606.367 0.031951604 0.018836128 3.02E-08 7.520695026 -0.064098706 NSPFQIPPPS(ph)PDSK ddPTM_A459_MK2206_30min_R1 2 NSPFQIPPPSPDSK 14 0 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 NSPFQIPPPS(0.912)PDS(0.088)K;NSPFQIPPPS(0.925)PDS(0.075)K 89.502 0.019438 37475000 10242.1 9797 9120 7762 7085.6 6390.6 7966.5 8342.2 9682 9161.1 TRUE FALSE 9370.955612 9159.213519 8500.95981 8359.830585 6803.365548 6752.430249 7435.069321 8269.265025 10688.47855 10296.04623 0.910150887 0.889585508 0.82565284 0.811945712 0.660774573 0.655827499 0.722128587 0.803149562 1.038114856 1 13.32980282 -8.229181632 5.660446955 1.020403402 0.779194843 0.569918755 0.081338878 0.139002906 13.55053342 0.070221676 0.024133078 5.90E-09 8.229181632 -0.241208559 NSPFQIPPPS(ph)PDSK ddPTM_A459_MK2206_30min_R2 4 NSPFQIPPPSPDSK 14 0 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 NSPFQIPPPS(0.647)PDS(0.353)K;NSPFQIPPPS(0.926)PDS(0.074)K;NSPFQIPPPS(0.979)PDS(0.021)K;NSPFQIPPPS(0.969)PDS(0.031)K 132.5 0.00080286 37591900 444356 487268 445793 429066 409701 336972 517310 412800 408701 520594 TRUE FALSE 478376.237 463070.9797 460655.5161 394009.9353 393614.0802 349795.7056 449386.5756 466754.3774 444249.0742 503607.0604 0.949899782 0.919508514 0.914712188 0.782375718 0.781589678 0.694580623 0.892335733 0.926822545 0.882134325 1 18.94193898 -10.09749907 9.086814886 0.999989738 0.857170663 0.224415719 0.077620336 0 0 0.084009497 0.020375296 7.99E-11 10.09749907 -0.142819075 NSPFQIPPPSPDS(ph)K ddPTM_A459_MK2206_30min_R2 1 NSPFQIPPPSPDSK 14 0 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 NSPFQIPPPS(0.291)PDS(0.709)K 92.427 0.015721 10512000 49234 58079 51323 53834 44670 36915 58666 48479 47504 60270 TRUE FALSE 53003.39289 55194.88131 53034.0832 49435.58999 42916.03135 38319.82619 50963.08373 54815.37175 51635.81205 58303.39484 0.909096169 0.946683833 0.909622559 0.847902427 0.736081175 0.657248627 0.87410148 0.940174614 0.885639888 1 15.83129227 -10.38495312 19.92135086 1 0.853866677 0.195643178 0.087298189 0 0 0.096536362 0.023413507 4.12E-11 10.38495312 -0.146133323 NSPGS(ph)QVASNPR ddPTM_A459_MK2206_30min_R2 1 NSPGSQVASNPR 12 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 NS(0.231)PGS(0.749)QVAS(0.02)NPR 78.529 0.043775 446430 2866.9 2843.4 2325.8 2933.4 2358.3 2296.3 2435.9 2177.2 1254.9 2424.9 TRUE FALSE 3086.392068 2702.200891 2403.341011 2693.731837 2265.701292 2383.687306 2116.063404 2461.767515 1364.048934 2345.775712 1.315723431 1.151943418 1.024539984 1.148333075 0.965864418 1.016161645 0.902074053 1.049447099 0.581491626 1 11.19584936 -3.87054228 0.326404367 0.863412594 1.94391333 0.514996683 0.126810497 10.44430459 0.56528875 0.119538328 4.997154741 0.000134728 3.87054228 1.080500735 NSPLDCGSAS(ph)PNK ddPTM_A459_MK2206_30min_R1 2 NSPLDCGSASPNK 13 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 NSPLDCGS(0.01)AS(0.99)PNK;NSPLDCGS(0.038)AS(0.962)PNK 191.15 0.00016923 21145000 7119.7 7235.3 7229.7 5430.4 4590.6 5290.4 6700.2 5370.2 8852.6 10456.3 TRUE FALSE 6514.132128 6764.280655 6738.968107 5848.650349 4407.746681 5589.937876 6253.241883 5323.248908 9772.859449 11751.70539 0.554313771 0.575599918 0.573445971 0.497685243 0.375072939 0.475670355 0.532113568 0.452976716 0.83161202 1 13.52058251 -8.421253386 3.401970507 0.995834923 0.504691348 0.888140357 0.059645968 0.073747413 1.562283521 0.063729498 0.016943423 3.79E-09 8.421253386 -0.491143574 NSPLDCGSAS(ph)PNK ddPTM_A459_MK2206_30min_R2 4 NSPLDCGSASPNK 13 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 NSPLDCGS(0.031)AS(0.969)PNK;NSPLDCGS(0.005)AS(0.995)PNK;NSPLDCGS(0.017)AS(0.983)PNK;NSPLDCGS(0.401)AS(0.599)PNK 221.78 9.12E-09 78876000 302063 204539 249692 190402 177208 113540 267130 205845 139174 263630 TRUE FALSE 325189.1755 194381.8907 258016.6067 174845.5475 170249.9235 117860.8443 232055.5101 232749.6483 151279.103 255027.7747 1.275112783 0.762198905 1.011719633 0.685594139 0.667574047 0.462149052 0.909922499 0.912644313 0.593186774 1 17.96029485 -2.227797882 1.131002898 0.752864849 199.9999885 0.412300715 0.174217911 615.5716332 2.686016389 0.053017654 315923.8094 0.00591837 2.227797882 199.2471237 NSPLEPDTST(ph)PLKK ddPTM_A459_MK2206_30min_R2 1 NSPLEPDTSTPLKK 14 1 A0A3F2YNX6;Q92794;A0A3B3ITI3;A0A3B3IS53 A0A3F2YNX6 KAT6A Histone acetyltransferase KAT6A 1 NSPLEPDT(0.125)S(0.217)T(0.658)PLKK 83.252 0.035158 6843800 79462 75656 78751 69557 79848 59007 87215 61921 59133 81705 TRUE FALSE 85545.67182 71899.03305 81376.51903 63873.9706 76712.76632 61252.55273 75763.56574 70014.28731 64276.28145 79038.97254 1.08232267 0.909665583 1.029574606 0.808132603 0.970568871 0.77496646 0.958559598 0.885819806 0.813222634 1 16.27027657 -1.522885461 0.715455452 0.88752672 26.29866137 0.297463765 0.081659448 365.7102546 1.823784579 0.029314606 14903.59199 0.029999536 1.522885461 25.41113465 NSPNNIS(ph)GISNPPGTPR ddPTM_A459_MK2206_30min_R2 1 NSPNNISGISNPPGTPR 17 0 Q9NW25;A0A087WVT6;Q9BWW4-2;Q9BWW4-3;Q9BWW4 Q9NW25 SSBP3 Single-stranded DNA-binding protein 3 1 NS(0.442)PNNIS(0.483)GIS(0.057)NPPGT(0.018)PR 92.096 0.0080722 8354200 17916 17723 17085 17467 15673 13802 21452 12452 11689 15940 TRUE FALSE 19287.66274 16842.90159 17654.60537 16039.89023 15057.59927 14327.24478 18635.32663 14079.51915 12705.68809 15419.87911 1.250830996 1.092284931 1.144925019 1.040208559 0.976505663 0.929141187 1.208526118 0.913075846 0.823981044 1 13.91250383 -1.522878745 0.314784493 0.945949996 3.677966032 0.45848775 0.095166272 54.67635263 0.780709129 0.094823084 85.51100242 0.03 1.522878745 2.732016036 NSPNNISGISNPPGT(ph)PR ddPTM_A459_MK2206_30min_R2 1 NSPNNISGISNPPGTPR 17 0 Q9NW25;A0A087WVT6;Q9BWW4-2;Q9BWW4-3;Q9BWW4 Q9NW25 SSBP3 Single-stranded DNA-binding protein 3 1 NSPNNISGISNPPGT(1)PR 195.09 2.16E-07 8173700 13727 19199 14630 14385 17429 13705 19732 15242 14198 15836 TRUE FALSE 14777.94967 18245.60558 15117.7569 13209.69948 16744.64989 14226.55338 17141.1647 17234.18173 15432.91638 15319.27262 0.964663927 1.19102297 0.986845608 0.862292866 1.093044709 0.928670292 1.118928106 1.125000003 1.007418352 1 13.90306018 -7.283339898 24.84850293 1.073253274 1.009673954 0.081853544 0.092267093 1971.960154 2237391.665 0.03902204 0.02634062 5.21E-08 7.283339898 -0.063579321 NSPQS(ph)SPTSTPK ddPTM_A459_MK2206_30min_R1 2 NSPQSSPTSTPK 12 0 Q9Y6Y0 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein 1 NSPQS(0.46)S(0.46)PT(0.04)S(0.04)TPK;NSPQS(0.846)S(0.118)PT(0.031)S(0.003)T(0.001)PK 173.33 0.00018814 17137800 9517.9 9723.8 10525.2 8588.1 7514.8 7653.5 8465.4 8977.5 9103.3 8301 TRUE FALSE 8708.352625 9090.778853 9810.778749 9249.55695 7215.469603 8086.834556 7900.688612 8899.010664 10049.62061 9329.390549 0.933432101 0.974423657 1.051599105 0.991442785 0.77341275 0.866812737 0.8468601 0.953868382 1.077200119 1 13.18756712 -11.06004747 5.659152781 1.000150858 0.937222786 0.037426246 0.087890541 0.000183227 1.50E-05 0.093208157 0.022552188 8.71E-12 11.06004747 -0.062928072 NSPQSS(ph)PTSTPK ddPTM_A459_MK2206_30min_R2 2 NSPQSSPTSTPK 12 0 Q9Y6Y0 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein 1 NSPQS(0.213)S(0.721)PT(0.063)S(0.003)TPK;NSPQS(0.115)S(0.816)PT(0.069)STPK 198.48 0.00012564 22897000 50509 50898 48043 45045 56231 37652 67058 51022 41985 60393 TRUE FALSE 54376.00787 48370.47933 49644.72964 41364.67941 54023.0884 39084.87324 58253.20405 57690.75058 45636.77941 58422.38136 0.930739326 0.827944329 0.849755325 0.708027959 0.9246985 0.669005137 0.997104238 0.987476875 0.781152332 1 15.83423354 -7.298093377 24.99974672 0.940389767 0.820042531 0.279066988 0.096878894 802.3712378 547251.8871 0.038877797 0.026212272 5.03E-08 7.298093377 -0.120347236 NSPS(ph)AASTSSNDSK ddPTM_A459_MK2206_30min_R2 1 NSPSAASTSSNDSK 14 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 NS(0.415)PS(0.585)AASTSSNDSK 246.03 6.94E-21 5602700 17755 10666 11059 11224 11674 7255.8 15848 12791 7507.6 14174 TRUE FALSE 19114.33645 10136.34195 11427.70154 10306.9633 11215.6201 7531.924553 13767.13856 14462.82762 8160.597477 13711.50354 1.394036503 0.739258238 0.833438981 0.751701902 0.817971572 0.54931427 1.004057544 1.054795163 0.595164305 1 13.74309916 -4.756934834 24.99071511 0.814012025 1.394037374 0.539467765 0.160158799 105.3605609 584455.7191 0.039248754 0.304252915 1.75E-05 4.756934834 0.580025349 NSPS(ph)NLSSSSDTGSVGGTYR ddPTM_A459_MK2206_30min_R2 1 NSPSNLSSSSDTGSVGGTYR 20 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 NS(0.047)PS(0.952)NLS(0.001)SSSDTGSVGGTYR 237.84 2.42E-67 0 10268 9837 8613.4 10698 9623.4 10579 11977 8743.7 5952.6 9232.5 TRUE FALSE 11054.12597 9348.508884 8900.566457 9823.939179 9245.536962 10981.59126 10404.40551 9886.531612 6470.346388 8931.244281 1.237691594 1.04671965 0.996565112 1.099951907 1.035190246 1.229570137 1.16494468 1.106960161 0.724461921 1 13.12464547 -8.237503507 23.48630851 0.862231037 1.110857452 0.519810767 0.097006029 243.9906218 239409.1223 0.064849902 0.024470933 5.79E-09 8.237503507 0.248626416 NSPSLQPPHPGS(ph)STPTLASR ddPTM_A459_MK2206_30min_R2 1 NSPSLQPPHPGSSTPTLASR 20 0 Q8TER5;Q8TER5-2;Q8TER5-4 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 NSPSLQPPHPGS(0.24)S(0.24)T(0.24)PT(0.24)LAS(0.041)R 67.368 0.0096443 8221600 10543 13931 18782 17217 17171 15543 21834 13626 14258 17435 TRUE FALSE 11350.18019 13239.2068 19408.18251 15810.31603 16496.78026 16134.49976 18967.16957 15406.96499 15498.13507 16866.09738 0.672958298 0.784959704 1.150721597 0.937402155 0.978102989 0.956623183 1.124573702 0.913487254 0.918892778 1 14.04183857 -5.063421238 5.685531731 0.994259397 0.696996897 0.670117759 0.07709207 0.104603847 6.738752479 0.019459093 0.055900096 8.64E-06 5.063421238 -0.2972625 NSPSLQPPHPGSSTPT(ph)LASR ddPTM_A459_MK2206_30min_R2 1 NSPSLQPPHPGSSTPTLASR 20 0 Q8TER5;Q8TER5-2;Q8TER5-4 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 NSPSLQPPHPGS(0.134)S(0.134)T(0.134)PT(0.583)LAS(0.015)R 99.097 0.001137 7936500 15693 19736 19427 20805 22283 19045 21564 20113 17714 21250 TRUE FALSE 16894.46815 18755.93894 20074.68648 19105.16495 21408.05746 19769.77082 18732.6209 22741.83816 19254.7317 20556.61424 0.821850717 0.912404091 0.976556073 0.92939259 1.041419429 0.961723102 0.911269759 1.106302716 0.936668436 1 14.32731505 -3.589789205 0.736656367 0.991629007 3.80E-09 0.472305526 0.05393021 11.78320109 1.266217682 0.020007103 14.47155795 0.000257164 3.589789205 -0.991629003 NSPSNLSSSSDT(ph)GSVGGTYR ddPTM_A459_MK2206_30min_R1 1 NSPSNLSSSSDTGSVGGTYR 20 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 NS(0.005)PS(0.069)NLS(0.014)S(0.087)S(0.087)S(0.087)DT(0.502)GS(0.151)VGGTYR 71.933 0.021482 3401100 531.01 366.11 548.41 388.19 376.24 486.57 567.58 539.81 533.15 783.99 TRUE FALSE 485.8448111 342.2761725 511.1854572 418.0884611 361.2535641 514.1191729 529.7177738 535.0904981 588.5728504 881.1166 0.551396729 0.388457297 0.580156426 0.47449845 0.409995186 0.583485969 0.601189189 0.60728682 0.667985202 1 9.783189136 -9.052840794 0.445507886 1.040459246 0.472151235 0.858443211 0.060954498 0.762286755 0.276279949 0.122746593 0.037517766 8.85E-10 9.052840794 -0.568308011 NSPTFKS(ph)FEEKVENLK ddPTM_A459_MK2206_30min_R1 1 NSPTFKSFEEKVENLK 16 2 H0YC42;P55327-2;P55327;P55327-3;P55327-4;P55327-7;P55327-5;P55327-6;E5RK35 H0YC42 TPD52 Tumor protein D52 1 NSPT(0.023)FKS(0.977)FEEKVENLK 103.73 0.0048033 11240000 3203.5 2702.1 2767.7 4114.2 2306.3 1731.9 1386.8 2603.9 1134.2 572.35 TRUE FALSE 2931.025503 2526.192799 2579.836235 4431.076397 2214.435187 1829.958681 1294.289102 2581.134377 1252.104149 643.257039 4.556538561 3.927190292 4.010583762 6.888500441 3.442535492 2.844832735 2.012086963 4.012601838 1.946506719 1 9.329251529 -6.507396063 12.64848483 2.597448297 4.776159424 0.544769556 1.058260623 1.022593195 833.6921335 0.333014639 0.361585337 3.11E-07 6.507396063 2.178711128 NSPTPAT(ph)STESLSPLHNVALR ddPTM_A459_MK2206_30min_R2 1 NSPTPATSTESLSPLHNVALR 21 0 Q7Z6B7;Q7Z6B7-2;G5EA48 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 NS(0.005)PT(0.008)PAT(0.416)S(0.416)T(0.153)ES(0.001)LSPLHNVALR 100.39 0.00037016 2712200 4991.8 9400.1 8285.3 10003 10206 7861.7 9998 8877.7 12020 7000.1 TRUE FALSE 5373.976046 8933.304703 8561.527767 9185.722902 9805.261159 8160.882502 8685.25059 10038.04587 13065.47787 6771.68731 0.793594831 1.319214 1.264312331 1.356489525 1.447979021 1.205147569 1.282582936 1.482355196 1.929427228 1 12.72529964 -4.437106046 1.623450921 1.386349655 4.87E-15 0.361115645 0.227661263 3.101413189 3.824509811 0.062672335 8.90864085 3.66E-05 4.437106046 -1.386349655 NSPTPATS(ph)TESLSPLHNVALR ddPTM_A459_MK2206_30min_R2 1 NSPTPATSTESLSPLHNVALR 21 0 Q7Z6B7;Q7Z6B7-2;G5EA48 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 NSPTPAT(0.026)S(0.857)T(0.112)ES(0.006)LSPLHNVALR 113.62 5.64E-05 3019200 12444 19762 19570 19585 24921 21958 26375 25678 25189 16291 TRUE FALSE 13396.72221 18780.64782 20222.45403 17984.84285 23942.47632 22793.62708 22911.93082 29034.20277 27379.89369 15759.426 0.850076786 1.191708874 1.283197372 1.141211796 1.519247993 1.446348812 1.453855668 1.842338849 1.737366176 1 13.94392737 -5.353789921 0.610881739 1.567198246 0.771071581 0.408011033 0.229094882 1.878259869 0.849271816 0.126061425 0.959077659 4.43E-06 5.353789921 -0.796126665 NSPTPATSTES(ph)LSPLHNVALR ddPTM_A459_MK2206_30min_R2 1 NSPTPATSTESLSPLHNVALR 21 0 Q7Z6B7;Q7Z6B7-2;G5EA48 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 NSPTPATSTES(0.511)LS(0.489)PLHNVALR 141 1.16E-05 5945700 19751 27114 19439 32018 24447 19405 21070 20844 17044 19981 TRUE FALSE 21263.15175 25767.55819 20087.08656 29402.02698 23487.08794 20143.47087 18303.48369 23568.38237 18526.45631 19329.02161 1.10006353 1.333102043 1.039219003 1.521133743 1.215120373 1.042136083 0.946943103 1.219326195 0.958478742 1 14.23848099 -6.722057954 5.15217145 1.041018618 1.253555303 0.355196901 0.1403699 0.218412407 13.64032638 0.046227721 0.044968366 1.90E-07 6.722057954 0.212536685 NSPTPATSTESLS(ph)PLHNVALR ddPTM_A459_MK2206_30min_R2 1 NSPTPATSTESLSPLHNVALR 21 0 Q7Z6B7;Q7Z6B7-2;G5EA48 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 NSPTPATSTES(0.015)LS(0.985)PLHNVALR 133.98 2.75E-05 6841300 19210 25945 21234 25334 24627 22066 26052 23594 17689 21770 TRUE FALSE 20680.73237 24656.60903 21941.93096 23264.13116 23660.02024 22905.73709 22631.34111 26677.81681 19227.55725 21059.64668 0.982007566 1.170798798 1.041894543 1.104678132 1.123476599 1.087660085 1.074630617 1.266774187 0.91300474 1 14.36219361 -8.298934542 24.99928954 0.956502298 1.105296739 0.395697933 0.074129629 623.7872585 415894.6792 0.06640979 0.0171481 5.02E-09 8.298934542 0.14879444 NSQDIT(ph)PVDNSMDSNIHQR ddPTM_A459_MK2206_30min_R2 1 NSQDITPVDNSMDSNIHQR 19 0 Q59FP8;Q92859-3;Q92859-2;Q92859-4;Q92859 Q59FP8 NEO1 Neogenin 1 NS(0.484)QDIT(0.516)PVDNSMDSNIHQR 187.47 5.90E-15 3493900 5650.6 6597.3 5305.5 6062.1 6282 5501.4 8914.4 5979.3 5666.3 6486.7 TRUE FALSE 6083.214281 6269.687675 5482.382722 5566.807038 6035.337115 5710.759632 7743.928572 6760.81504 6159.144532 6275.03951 0.969430435 0.999147123 0.873680988 0.887134978 0.961800656 0.910075486 1.234084432 1.07741394 0.981530797 1 12.61540883 -7.211010509 24.99998373 1.079708816 0.932980531 0.470605364 0.072463547 310.5105939 153934.9055 0.028095299 0.021762492 6.15E-08 7.211010509 -0.146728284 NSQEDS(ph)EDSEDKDVK ddPTM_A459_MK2206_30min_R1 6 NSQEDSEDSEDKDVK 15 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 NS(0.002)QEDS(0.996)EDS(0.002)EDKDVK;NS(0.001)QEDS(0.995)EDS(0.004)EDKDVK;NSQEDS(0.998)EDS(0.002)EDKDVK;NS(0.007)QEDS(0.986)EDS(0.007)EDKDVK;NSQEDS(1)EDSEDKDVK;NSQEDS(0.992)EDS(0.008)EDKDVK 191.36 0.00013567 384084200 17411.09 25252.7 25675.2 22886.2 11992.89 9905.94 13153.31 15646.87 20944.3 19519.32 TRUE FALSE 15930.18537 23608.74464 23932.43896 24648.89909 11515.1878 10466.80576 12275.87669 15510.07107 23121.53493 21937.52072 0.72616161 1.076181075 1.090936358 1.123595478 0.52490835 0.4771189 0.559583594 0.707011119 1.053972107 1 14.42111287 -6.255847266 24.98336781 0.68557479 1.015552933 0.303845386 0.2061455 525.2482725 2346602.22 0.063686965 0.079867008 5.55E-07 6.255847266 0.329978143 NSQEDS(ph)EDSEDKDVK ddPTM_A459_MK2206_30min_R2 3 NSQEDSEDSEDKDVK 15 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 NSQEDS(1)EDSEDKDVK;NS(0.001)QEDS(0.98)EDS(0.019)EDKDVK;NSQEDS(0.999)EDS(0.001)EDKDVK 130.64 0.0010065 375583000 113289 97843 108585 75422 80891 39832.9 107026 79182 60644 118423 TRUE FALSE 121962.4929 92984.2589 112205.1697 69259.78134 77714.8129 41348.76892 92973.35764 89531.35927 65918.7055 114558.8672 1.06462726 0.811672297 0.979454253 0.604578092 0.678383217 0.360939052 0.811577138 0.781531465 0.575413384 1 16.80572961 -5.758396782 24.99354971 0.669570737 0.937893422 0.336428428 0.168530695 87.45901065 718419.6842 0.045195884 0.07418004 1.74E-06 5.758396782 0.268322685 NSQEDSEDS(ph)EDKDVK ddPTM_A459_MK2206_30min_R1 1 NSQEDSEDSEDKDVK 15 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 NSQEDS(0.499)EDS(0.501)EDKDVK 120.3 0.0092602 0 568.84 883.28 574.62 694.64 559.41 387.3 375.12 451.34 697.62 608.13 TRUE FALSE 520.4571709 825.7783115 535.6163954 748.1412932 537.1275151 409.2285913 350.0964292 447.393982 770.1400955 683.4697355 0.761492637 1.20821489 0.78367244 1.094622416 0.785883394 0.598751591 0.512233989 0.654592235 1.12680936 1 9.416733646 -6.4326392 6.68674443 0.735157885 0.965632529 0.135371885 0.211825536 0.404163216 25.34769491 0.065487979 0.074084413 3.69E-07 6.4326392 0.230474644 NSQEDSEDS(ph)EDKDVK ddPTM_A459_MK2206_30min_R2 1 NSQEDSEDSEDKDVK 15 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 NSQEDS(0.367)EDS(0.633)EDKDVK 96.561 0.0055511 337680000 31170 22400 28842 23156 25000 14586 34042 28112 14083 32912 TRUE FALSE 33556.39917 21287.64857 29803.57788 21264.08073 24018.37439 15141.08045 29572.24451 31786.33492 15307.91388 31838.08414 1.053970428 0.66862216 0.936098346 0.667881919 0.754391322 0.475565062 0.928832413 0.998374613 0.480805121 1 14.9584659 -4.749167479 24.69318508 0.765401771 1.053971205 0.174152259 0.186857652 876.5777069 1763699.235 0.044794729 0.743110009 1.78E-05 4.749167479 0.288569434 NSQPNRYT(ph)NR ddPTM_A459_MK2206_30min_R1 1 NSQPNRYTNR 10 1 P50750-2;P50750 P50750-2 CDK9 Cyclin-dependent kinase 9 1 NSQPNRYT(1)NR 134.56 0.021561 3854700 1973 1587.2 1519.7 1772.9 1055.1 1082.6 1508.8 1695.1 257.77 939.67 TRUE FALSE 1805.185989 1483.872992 1416.546998 1909.449065 1013.073133 1143.895876 1408.150705 1680.279919 284.5661139 1056.083414 1.70932141 1.40507177 1.34132113 1.808047584 0.959273784 1.083149173 1.333370723 1.591048489 0.269454202 1 10.04450807 -6.754798596 0.383308604 0.864736145 1.671629808 0.321394976 0.350890943 2.1589652 0.653612413 0.379034099 0.674034346 1.76E-07 6.754798596 0.806893663 NSS(ph)EASSGDFLDLK ddPTM_A459_MK2206_30min_R1 3 NSSEASSGDFLDLK 14 0 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 NS(0.256)S(0.743)EASSGDFLDLK;NS(0.22)S(0.713)EAS(0.061)S(0.005)GDFLDLK;NS(0.261)S(0.731)EAS(0.007)S(0.001)GDFLDLK 268.17 3.26E-44 89932000 13395.5 14897.3 15295.3 10534 9796.4 9690.8 14072.6 11085.8 19005 22596.7 TRUE FALSE 12256.14238 13927.48306 14257.09765 11345.33051 9406.188644 10239.48472 13133.84253 10988.87802 20980.63776 25396.14979 0.482598444 0.548409234 0.561388154 0.446734273 0.370378531 0.403190437 0.517158807 0.432698583 0.826134589 1 14.63232217 -8.408961559 3.230480171 0.995697544 0.47054752 0.901410979 0.059736977 0.071828474 1.379296142 0.064030763 0.017124354 3.90E-09 8.408961559 -0.525150024 down NSS(ph)EASSGDFLDLK ddPTM_A459_MK2206_30min_R2 2 NSSEASSGDFLDLK 14 0 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 NS(0.286)S(0.714)EASSGDFLDLK;NS(0.208)S(0.758)EAS(0.031)S(0.003)GDFLDLK 216.34 1.34E-08 47446000 97376 60220 73188 59987 53761 39116 70499 50993 40117 69195 TRUE FALSE 104831.1814 57229.56237 75628.05139 55085.87021 51650.07301 40604.58679 61242.39662 57657.96019 43606.30415 66937.17282 1.566113073 0.854974298 1.129836356 0.822948862 0.771620175 0.606607436 0.914923562 0.861374297 0.651451239 1 16.03052 -1.975081829 0.958719968 0.807244284 199.9999049 0.672893892 0.148846607 277.2899082 1.242083377 0.047124618 120128.6879 0.010590542 1.975081829 199.1926606 NSS(ph)EKLPTELSK ddPTM_A459_MK2206_30min_R1 1 NSSEKLPTELSK 12 1 P38432 P38432 COIL Coilin 1 NS(0.063)S(0.84)EKLPT(0.011)ELS(0.086)K 116.78 0.023392 4098700 2241.3 2643 2498 2349.8 1710.5 1730.8 2092.8 2271.1 2248.9 1985 TRUE FALSE 2050.665665 2470.94022 2328.44272 2530.782003 1642.367163 1828.7964 1953.193131 2251.244012 2482.681203 2230.916786 0.919203118 1.107589595 1.04371563 1.134413448 0.736184861 0.81975106 0.875511423 1.009111602 1.112852446 1 11.12342099 -6.22764551 24.99957619 0.918230306 1.054719319 0.230724607 0.111856724 970.7873108 718156.1247 0.035261158 0.045519413 5.92E-07 6.22764551 0.136489013 NSS(ph)LGSPSNLCGSPPGS(ph)IR ddPTM_A459_MK2206_30min_R2 1 NSSLGSPSNLCGSPPGSIR 19 0 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 2 NS(0.047)S(0.491)LGS(0.338)PS(0.122)NLCGS(0.004)PPGS(0.997)IR 114.19 0.0090883 2927400 14246 14015 13045 10693 13600 14331 14200 11717 10121 14591 TRUE FALSE 15336.68471 13319.03548 13479.91379 9819.347695 13065.99567 14876.37625 12335.52294 13248.45213 11001.30629 14114.89686 1.086560168 0.943615501 0.955013268 0.695672649 0.925688355 1.053948632 0.873936456 0.938614873 0.779411029 1 13.78493097 -4.708792259 1.968681561 0.898997018 1.165590725 0.241918811 0.097803861 1.441934841 5.178380191 0.026653929 0.750140283 1.96E-05 4.708792259 0.266593707 NSS(ph)LLEPQK ddPTM_A459_MK2206_30min_R2 1 NSSLLEPQK 9 0 Q6P0N0;C9J2Q8;G5E9K5;Q6P0N0-2 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 NS(0.021)S(0.979)LLEPQK 89.403 0.029915 5156300 67134 77280 74361 69516 74484 65538 101230 76353 52828 75517 TRUE FALSE 72273.83066 73442.38758 76840.15863 63836.32043 71559.38391 68032.09451 87938.3794 86332.59926 57422.88395 73052.88647 0.989335728 1.005331769 1.051842882 0.873837072 0.979555872 0.93127182 1.203763241 1.181782178 0.786045381 1 16.15665366 NSS(ph)PAPPQPAPGK ddPTM_A459_MK2206_30min_R1 4 NSSPAPPQPAPGK 13 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 NS(0.005)S(0.995)PAPPQPAPGK;NS(0.002)S(0.998)PAPPQPAPGK;NS(0.01)S(0.99)PAPPQPAPGK;NS(0.295)S(0.705)PAPPQPAPGK 173.71 0.00014237 329894000 41104.7 44714.5 44011 30314.1 31177.3 32924 40792.8 31038.3 44761.8 44258.1 TRUE FALSE 37608.52942 41803.57792 41023.65594 32648.89723 29935.44212 34788.12843 38071.58674 30766.93542 49414.94929 49741.12756 0.756085181 0.840422805 0.824743184 0.656376299 0.601824759 0.699383591 0.765394526 0.618541174 0.993442483 1 15.60215159 -8.276071936 24.53619531 0.99672137 0.72254866 0.679494877 0.0759126 452.6459293 758997.3606 0.079193029 0.020833762 5.30E-09 8.276071936 -0.27417271 NSS(ph)PAPPQPAPGK ddPTM_A459_MK2206_30min_R2 6 NSSPAPPQPAPGK 13 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 NS(0.006)S(0.994)PAPPQPAPGK;NS(0.002)S(0.998)PAPPQPAPGK;NS(0.004)S(0.996)PAPPQPAPGK;NS(0.202)S(0.798)PAPPQPAPGK;NS(0.011)S(0.989)PAPPQPAPGK;NS(0.004)S(0.996)PAPPQPAPGK 181.71 0.00010335 641009000 374887 368603 351262 366041 341268 266075 412342 312088 255787 378377 TRUE FALSE 403588.637 350298.711 362972.8998 336134.2794 327868.1036 276200.6706 358201.0001 352878.9732 278034.8909 366030.5895 1.10260904 0.957020318 0.991646355 0.918322919 0.895739627 0.754583574 0.978609467 0.964069625 0.759594687 1 18.4816047 -3.871635287 0.709296877 0.890627584 1.673072946 0.362620637 0.08134569 10.32820463 1.515408553 0.032261044 8.730726296 0.000134389 3.871635287 0.782445362 NSS(ph)PGEASLLEK ddPTM_A459_MK2206_30min_R1 4 NSSPGEASLLEK 12 0 Q76FK4-2;Q76FK4-4;Q76FK4 Q76FK4-2 NOL8 Nucleolar protein 8 1 NS(0.029)S(0.971)PGEASLLEK;NS(0.277)S(0.723)PGEASLLEK;NS(0.175)S(0.825)PGEASLLEK;NS(0.001)S(0.999)PGEASLLEK 206.49 1.03E-05 115451000 21956.5 21938.6 22017.6 18854.4 17242.5 16659.4 19925.9 18043.7 21170.2 21801.8 TRUE FALSE 20088.98438 20510.39315 20523.10666 20306.56915 16555.69471 17602.64083 18596.67957 17885.94583 23370.91805 24502.77158 0.819865798 0.837064211 0.837583071 0.828745805 0.675666206 0.718393867 0.758962288 0.729956029 0.953807122 1 14.58065733 -8.362208885 4.707762987 0.994676779 0.776062923 0.695890743 0.053412389 0.139267044 4.732202741 0.05809437 0.015253195 4.34E-09 8.362208885 -0.218613855 NSS(ph)PGEASLLEK ddPTM_A459_MK2206_30min_R2 3 NSSPGEASLLEK 12 0 Q76FK4-2;Q76FK4-4;Q76FK4 Q76FK4-2 NOL8 Nucleolar protein 8 1 NS(0.226)S(0.774)PGEASLLEK;NS(0.014)S(0.986)PGEASLLEK;NS(0.01)S(0.988)PGEAS(0.002)LLEK 186.29 0.00010945 53727800 182444 167894 170930 167349 174444 133669 198674 136786 135389 175605 TRUE FALSE 196412.0529 159556.6281 176628.7209 153676.0514 167594.452 138755.8675 172587.8651 154664.3999 147164.8905 169875.0232 1.156215017 0.939258904 1.039756861 0.904641827 0.986575006 0.81681147 1.015969634 0.910459919 0.866312703 1 17.37411422 -1.522878815 0.927651083 0.930167625 128.8300068 0.46494502 0.067597078 915.0378077 1.772721355 0.020815816 248095.0685 0.029999995 1.522878815 127.8998391 NSS(ph)PPPSPNK ddPTM_A459_MK2206_30min_R1 1 NSSPPPSPNK 10 0 P20020-6;P20020;P20020-4;P20020-1;A0A0U1RQU3;E7ERY9 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 NS(0.418)S(0.582)PPPSPNK 131.17 0.0026546 4684400 5494.8 5698.5 4036.6 4416.6 5084.4 4201.1 7455 6263.6 5680.9 8280.2 TRUE FALSE 5027.438406 5327.526614 3762.606839 4756.767297 4881.877582 4438.962651 6957.690552 6208.838006 6271.449884 9306.013688 0.540235441 0.572482138 0.404319934 0.511149828 0.524593854 0.476999368 0.74765531 0.667185566 0.673913675 1 13.18394759 -8.652519982 0.456403439 1.017764219 0.486857194 0.814208201 0.069729736 0.564004253 0.278954319 0.101655488 0.046261031 2.23E-09 8.652519982 -0.530907025 NSS(ph)PPPSPNK ddPTM_A459_MK2206_30min_R2 2 NSSPPPSPNK 10 0 P20020-6;P20020;P20020-4;P20020-1;A0A0U1RQU3;E7ERY9 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 NS(0.031)S(0.946)PPPS(0.023)PNK;NS(0.003)S(0.979)PPPS(0.018)PNK 113.38 0.007664 11151300 63728 40762 46343 40344 35378 41684 72256 42403 55146 61458 TRUE FALSE 68607.06468 38737.81835 47888.05249 37047.76615 33988.88196 43270.31383 62768.7004 47945.21769 59942.4994 59452.63049 1.153978623 0.651574506 0.805482484 0.623147636 0.571696856 0.727811595 1.055776673 0.806444009 1.008239651 1 15.85945302 -7.244316627 23.87690054 0.951485414 0.738771637 0.285298837 0.162278136 599.8007174 836395.5661 0.061964509 0.047854834 5.70E-08 7.244316627 -0.212713776 NSS(ph)QDDLFPTSDTPR ddPTM_A459_MK2206_30min_R1 2 NSSQDDLFPTSDTPR 15 0 Q9H6T3-3;Q9H6T3-2;Q9H6T3 Q9H6T3-3 RPAP3 RNA polymerase II-associated protein 3 1 NS(0.001)S(0.999)QDDLFPTSDTPR;NS(0.001)S(0.999)QDDLFPTSDTPR 195.28 2.58E-05 4751300 1604.56 1706.38 1932.17 1580.71 1871.91 1862.83 1825.28 1592.87 1559.46 1585.13 TRUE FALSE 1468.083746 1595.294352 1801.019684 1702.456558 1797.347861 1968.301825 1703.518902 1578.943706 1721.571448 1781.507872 0.824068066 0.895474209 1.010952414 0.955626739 1.008891338 1.104851601 0.956223056 0.886296227 0.966356352 1 10.79888314 -5.019387973 2.984220451 0.98490875 0.825869052 0.498268734 0.052868165 0.251042867 4.227153747 0.015260315 0.072882418 9.56E-06 5.019387973 -0.159039698 NSS(ph)SPVSPASVPGQR ddPTM_A459_MK2206_30min_R1 1 NSSSPVSPASVPGQR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 NS(0.001)S(0.499)S(0.499)PVSPASVPGQR 265.43 3.96E-37 64352000 4453.9 5311.3 4999.4 4552.3 4566 4175.4 4930.5 4654.4 4827.9 4759 TRUE FALSE 4075.072417 4965.533405 4660.054657 4902.918935 4384.126551 4411.80754 4601.595341 4613.707072 5329.777482 5348.580849 0.761897881 0.92838335 0.871269368 0.916676605 0.819680337 0.824855726 0.860339494 0.86260397 0.996484419 1 12.38494043 -8.260810078 5.805982582 1.000298672 0.858315559 0.614216884 0.045162141 0.09959179 14.37674664 0.036158313 0.011281159 5.49E-09 8.260810078 -0.141983113 NSS(ph)SPVSPASVPGQR ddPTM_A459_MK2206_30min_R2 3 NSSSPVSPASVPGQR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 NS(0.006)S(0.497)S(0.497)PVSPASVPGQR;NS(0.008)S(0.902)S(0.09)PVSPASVPGQR;NS(0.012)S(0.494)S(0.494)PVSPASVPGQR 239.33 4.86E-20 214268000 180930 198441 201035 198088 199805 153535 229292 181352 166744 192222 TRUE FALSE 194782.1399 188586.7085 207737.4066 181903.5767 191959.6518 159377.882 199185.685 205055.3291 181247.0917 185949.8119 1.047498451 1.01418069 1.117169221 0.978240176 1.032319688 0.857101604 1.071179814 1.102745558 0.974709734 1 17.50455376 -5.792094899 24.99749077 1.00467652 1.05507276 0.134276071 0.066171749 467.4005192 381131.5059 0.019348607 0.028702426 1.61E-06 5.792094899 0.05039624 NSS(ph)YFVEWIPNNVK ddPTM_A459_MK2206_30min_R1 2 NSSYFVEWIPNNVK 14 0 P04350;K7ESM5;Q9BUF5;P68371;P07437;Q5JP53;Q5ST81;A0A0B4J269;Q13509;Q13509-2;Q9BVA1;Q13885 P04350;P68371;P07437;A0A0B4J269;Q9BVA1 TUBB4A;TUBB6;TUBB4B;TUBB;TUBB3;TUBB2B;TUBB2A Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-2A chain 1 NS(0.003)S(0.997)YFVEWIPNNVK;NS(0.021)S(0.979)YFVEWIPNNVK 220.59 7.52E-09 23674000 6247 7216.3 5971.4 5399.7 5116.2 5636.5 5547.6 5335.5 5680.2 4990.3 TRUE FALSE 5715.659846 6746.517558 5566.078005 5815.58583 4912.41092 5955.633759 5177.529726 5288.852286 6270.677117 5608.536039 1.019100137 1.202901704 0.992429748 1.036916905 0.875881137 1.061887401 0.923151726 0.943000499 1.118059521 1 12.45340853 -5.354521196 10.05211562 0.988922856 1.110856286 0.2642235 0.077806305 0.5050993 51.48657327 0.019273109 0.040168318 4.42E-06 5.354521196 0.12193343 NSS(ph)YFVEWIPNNVK ddPTM_A459_MK2206_30min_R2 2 NSSYFVEWIPNNVK 14 0 P04350;K7ESM5;Q9BUF5;P68371;P07437;Q5JP53;Q5ST81;A0A0B4J269;Q13509;Q13509-2;Q9BVA1;Q13885 P04350;P68371;P07437;A0A0B4J269;Q9BVA1 TUBB4A;TUBB6;TUBB4B;TUBB;TUBB3;TUBB2B;TUBB2A Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-2A chain 1 NS(0.005)S(0.995)YFVEWIPNNVK;NS(0.033)S(0.967)YFVEWIPNNVK 203.53 3.43E-05 8293700 59797 58928 44218 66878 60480 52788 73900 53994 44791 58906 TRUE FALSE 64375.1043 56001.72121 45692.20605 61413.85347 58105.25131 54796.88433 64196.84123 61051.20119 48686.84022 56983.90204 1.129706847 0.982763889 0.801844107 1.077740401 1.019678352 0.961620429 1.126578541 1.071376283 0.85439639 1 15.79826679 NSSCGGGISSS(ph)SSSR ddPTM_A459_MK2206_30min_R2 1 NSSCGGGISSSSSSR 15 0 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 NSSCGGGISS(0.024)S(0.408)S(0.408)S(0.134)S(0.024)R 103.39 0.0092439 0 5025.2 3597.5 4475.6 2971.3 3988.5 3609.5 5323.3 3086.6 3795.1 5155.1 TRUE FALSE 5409.933176 3418.853381 4624.81427 2728.535285 3831.891449 3746.862052 4624.344316 3490.029218 4125.190938 4986.889509 1.084831169 0.685568304 0.927394574 0.547141716 0.768393092 0.751342504 0.927300336 0.699840895 0.827207206 1 12.28392452 -9.555817705 12.40748237 1.000017639 0.793060024 0.143810877 0.14332884 0 0 0.130945231 0.031758883 2.78E-10 9.555817705 -0.206957615 NSSCGGGISSSS(ph)SSR ddPTM_A459_MK2206_30min_R2 1 NSSCGGGISSSSSSR 15 0 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 NSSCGGGISS(0.003)S(0.017)S(0.97)S(0.009)SR 116.04 0.0028835 0 5209.7 5584 4188.4 2970.9 5870.7 5431.9 5413.2 3759.9 4214.9 4457.5 TRUE FALSE 5608.558638 5306.70668 4328.039166 2728.167967 5640.18682 5638.614761 4702.440338 4251.33184 4581.504383 4312.05214 1.300670413 1.230668486 1.003707521 0.632684364 1.308005246 1.307640673 1.090534202 0.985918468 1.062488169 1 12.07415891 -7.597551157 6.574162216 1.02021121 1.12148471 0.064730343 0.192276003 0.821810013 57.73324938 0.100195175 0.057305442 2.53E-08 7.597551157 0.1012735 NSSCGGGISSSSS(ph)SR ddPTM_A459_MK2206_30min_R1 2 NSSCGGGISSSSSSR 15 0 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 NSSCGGGISSS(0.001)S(0.004)S(0.497)S(0.497)R;NSSCGGGISSS(0.011)S(0.073)S(0.91)S(0.006)R 136.35 0.00040603 2182650 1331.62 1281.25 1070.9 849.14 973.48 703.38 1032.91 926.56 983.54 930.77 TRUE FALSE 1218.358726 1197.840392 998.2102917 914.5409099 934.7042302 743.2047678 964.0064586 918.4591836 1085.782503 1046.080815 1.164688913 1.14507443 0.954238217 0.874254548 0.893529656 0.710465919 0.921541094 0.878000218 1.037952792 1 10.0307786 -5.324676363 2.785397002 0.890017939 1.166818368 0.59147846 0.082364439 0.178332481 2.674158507 0.022796919 0.063445457 4.74E-06 5.324676363 0.276800429 NSSLGS(ph)PSNLCGS(ph)PPGSIR ddPTM_A459_MK2206_30min_R1 1 NSSLGSPSNLCGSPPGSIR 19 0 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 2 NSS(0.001)LGS(0.987)PS(0.035)NLCGS(0.818)PPGS(0.159)IR 120.25 0.0079626 4592000 1256.5 1352 1585 1256.1 1258.3 1095.6 1675.7 1536.8 1376.6 1114 TRUE FALSE 1149.628077 1263.984554 1477.414616 1352.84504 1208.179247 1157.631925 1563.91711 1523.36392 1519.702496 1252.01073 0.918225419 1.009563675 1.18003351 1.080537896 0.964991128 0.924618214 1.249124367 1.216733917 1.213809482 1 10.29003121 -7.26897762 24.96567748 1.187978104 1.021319805 0.382687988 0.096206239 613.9665546 2033367.811 0.041150631 0.02833893 5.38E-08 7.26897762 -0.166658298 NSSLGS(ph)PSNLCGS(ph)PPGSIR ddPTM_A459_MK2206_30min_R2 2 NSSLGSPSNLCGSPPGSIR 19 0 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 2 NS(0.001)S(0.013)LGS(0.959)PS(0.227)NLCGS(0.798)PPGS(0.002)IR;NSS(0.002)LGS(0.998)PSNLCGS(0.998)PPGS(0.002)IR 204.17 1.41E-14 14610500 52681 56346 59512 61902 59756 57557 67474 52951 54398 69651 TRUE FALSE 56714.29786 53547.93957 61496.10038 56844.40859 57409.67919 59747.37197 58614.58275 59871.87751 59129.43971 67378.29357 0.841729507 0.794735763 0.912698988 0.843660555 0.852050062 0.886745104 0.869932728 0.888592963 0.877574016 1 16.03999627 -14.52287875 0.146792869 1.487228096 0.818720386 0.716930946 0.027351307 71.68399102 0.629075188 10.16193303 0.144812755 3.00E-15 14.52287875 -0.66850771 NSSLGS(ph)PSNLCGSPPGSIR ddPTM_A459_MK2206_30min_R1 1 NSSLGSPSNLCGSPPGSIR 19 0 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 1 NSSLGS(0.598)PS(0.177)NLCGS(0.224)PPGS(0.001)IR 128.72 0.00032244 11391000 2301.6 2076.8 2422.5 2287.4 2421.9 1880 2181.9 2145.6 2333.9 2269.4 TRUE FALSE 2105.836834 1941.599943 2258.067449 2463.575944 2325.430595 1986.443975 2036.349432 2126.841245 2576.517257 2550.550405 0.825640156 0.761247431 0.885325554 0.965899729 0.911736773 0.778829531 0.798396075 0.833875402 1.010180882 1 11.3165929 -8.263014814 24.91002247 1.005090466 0.846142899 0.54037078 0.059008732 116.1980024 1837171.036 0.054177374 0.016838308 5.46E-09 8.263014814 -0.158947567 NSSLGSPSNLCGS(ph)PPGSIR ddPTM_A459_MK2206_30min_R1 2 NSSLGSPSNLCGSPPGSIR 19 0 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 1 NSSLGS(0.002)PS(0.012)NLCGS(0.984)PPGS(0.002)IR;NSS(0.001)LGS(0.026)PS(0.013)NLCGS(0.961)PPGSIR 163.92 4.98E-07 62209000 4935.6 5168.9 5315.5 4640.1 4690.3 4449.6 4841.3 4388.5 5426.9 4676.6 TRUE FALSE 4515.801302 4832.403671 4954.69867 4997.481306 4503.475419 4701.532507 4518.34571 4350.131807 5991.045675 5255.972515 0.859175213 0.919411899 0.942679715 0.950819528 0.856830093 0.894512384 0.859659311 0.827654976 1.139854833 1 12.35974202 -8.260324625 24.99999795 1.069927423 0.891871409 0.68529917 0.049050814 55.20627899 1238159.94 0.038272039 0.012562328 5.49E-09 8.260324625 -0.178056014 NSSLGSPSNLCGS(ph)PPGSIR ddPTM_A459_MK2206_30min_R2 4 NSSLGSPSNLCGSPPGSIR 19 0 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 1 NSSLGS(0.041)PS(0.442)NLCGS(0.516)PPGSIR;NSSLGSPS(0.003)NLCGS(0.997)PPGSIR;NSSLGS(0.01)PS(0.083)NLCGS(0.891)PPGS(0.016)IR;NSSLGSPS(0.241)NLCGS(0.758)PPGSIR 191.66 2.98E-15 150844300 244682 314658 249615 303232 309462 242917 353924 224214 267225 319051 TRUE FALSE 263415.042 299032.5413 257937.0395 278456.9756 297310.967 252161.3767 307453.3537 253519.5396 290467.7475 308640.392 0.853469114 0.968870404 0.835720295 0.902205229 0.963292475 0.817007052 0.996153976 0.821407522 0.94112033 1 18.23556736 -8.528370456 23.72839882 1.000000007 0.897504858 0.226039642 0.060993421 446.7055006 1930115.172 0.053449457 0.013800591 2.96E-09 8.528370456 -0.102495149 NSSNTSVGS(ph)PSNTIGR ddPTM_A459_MK2206_30min_R1 4 NSSNTSVGSPSNTIGR 16 0 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 NSSNTS(0.001)VGS(0.986)PS(0.012)NTIGR;NSSNT(0.002)S(0.003)VGS(0.494)PS(0.494)NT(0.007)IGR;NS(0.001)SNT(0.001)S(0.003)VGS(0.99)PS(0.005)NTIGR;NS(0.001)S(0.001)NT(0.001)SVGS(0.994)PS(0.003)NTIGR 236.68 2.94E-21 260057000 13677.3 11598.7 11505.8 9709.9 9641.3 8445.2 9762.3 9549.9 9524.7 8674.9 TRUE FALSE 12513.97381 10843.62252 10724.81835 10457.75818 9257.266605 8923.359926 9111.074779 9466.406231 10514.82665 9749.612104 1.283535558 1.112210661 1.100025133 1.072633256 0.949501017 0.915252815 0.934506387 0.970952088 1.078486666 1 13.25112911 -4.6959124 0.739456289 0.971100504 1.477130959 0.764043337 0.051382619 1.59853881 0.609439183 0.022625662 0.694780986 2.01E-05 4.6959124 0.506030455 NSSNTSVGS(ph)PSNTIGR ddPTM_A459_MK2206_30min_R2 4 NSSNTSVGSPSNTIGR 16 0 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 NSSNT(0.051)S(0.128)VGS(0.804)PS(0.013)NT(0.005)IGR;NSSNT(0.005)S(0.031)VGS(0.951)PS(0.008)NT(0.005)IGR;NSSNT(0.007)S(0.003)VGS(0.702)PS(0.285)NT(0.003)IGR;NSS(0.001)NTSVGS(0.997)PS(0.002)NTIGR 209.73 5.20E-08 291570400 70504 67003.2 57950.5 61484 60352 60986.7 65689 50034.9 54762.1 62233.6 TRUE FALSE 75901.84045 63675.91852 59882.54075 56460.56052 57982.27724 63307.5916 57063.95539 56574.63323 59525.20847 60202.92273 1.260766704 1.057688159 0.994678299 0.937837533 0.963113992 1.051570069 0.947860217 0.939732336 0.988742835 1 15.87754591 -4.68564323 1.800072177 0.974477062 1.406896115 0.875020845 0.032343302 0.381590044 1.044897869 0.00916868 0.305752749 2.06E-05 4.68564323 0.432419052 NSSNTSVGSPS(ph)NTIGR ddPTM_A459_MK2206_30min_R2 1 NSSNTSVGSPSNTIGR 16 0 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 NSSNT(0.001)SVGS(0.096)PS(0.9)NT(0.003)IGR 241.11 1.59E-21 9941600 11845 13028 10975 11656 11706 10081 10587 9229.3 9561.8 10625 TRUE FALSE 12751.86231 12381.04846 11340.90102 10703.66751 11246.36362 10464.63952 9196.914183 10435.6012 10393.46808 10278.30712 1.24065784 1.204580513 1.10338219 1.041384285 1.09418443 1.018128705 0.894788809 1.015303501 1.011204273 1 13.32731505 -5.112433786 0.60562762 0.982593735 1.363331455 0.815166961 0.041662292 1.112101604 0.406904785 0.023818272 0.279490612 7.72E-06 5.112433786 0.380737719 NSSPS(ph)DSKPPFSQGQEK ddPTM_A459_MK2206_30min_R2 1 NSSPSDSKPPFSQGQEK 17 1 Q70EL1;Q70EL1-7;Q70EL1-9;Q70EL1-10;Q70EL1-8 Q70EL1 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 NS(0.006)S(0.016)PS(0.949)DS(0.028)KPPFSQGQEK 66.289 0.022818 3991200 10336 12048 11244 12979 12576 9108.4 17190 11557 10005 13317 TRUE FALSE 11127.33211 11449.71384 11618.86935 11918.57418 12082.20305 9455.026545 14932.93235 13067.53958 10875.21682 12882.46738 0.863757833 0.888782677 0.901913353 0.925177905 0.937879576 0.733945312 1.1591671 1.014366208 0.844187413 1 13.65312132 -7.259947385 24.99979738 1.005627357 0.882187436 0.33923666 0.088001787 170.6478321 2859399.652 0.035080097 0.025648988 5.50E-08 7.259947385 -0.12343992 NSSQS(ph)EEDDIER ddPTM_A459_MK2206_30min_R2 1 NSSQSEEDDIER 12 0 F6RP06;A0A0J9YW18;Q12983 F6RP06 BNIP3 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 1 NS(0.005)S(0.025)QS(0.97)EEDDIER 107.69 0.0094628 0 2932.9 3062.1 888.85 2990.4 2780.4 3297.6 2346.4 2237.5 2363 3034.5 TRUE FALSE 3157.445079 2910.040567 918.4838154 2746.074754 2671.227526 3423.092479 2038.314861 2529.948932 2568.529469 2935.484514 1.075612923 0.991332284 0.312890022 0.93547581 0.909978408 1.166108172 0.694370845 0.861850547 0.874993364 1 11.51938293 -5.015453904 24.90812678 0.837966932 1.054543011 0.118147941 0.211503178 1248.367626 2012101.137 0.054511982 0.155364908 9.65E-06 5.015453904 0.216576079 NSSQSGGKPGS(ph)SPITK ddPTM_A459_MK2206_30min_R2 1 NSSQSGGKPGSSPITK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NSSQSGGKPGS(0.497)S(0.497)PIT(0.006)K 57.537 0.046051 127390000 175560 162920 160350 166660 158050 78851 202330 123390 130170 154590 TRUE FALSE 189001.0086 154829.6297 165695.989 153043.3449 151844.1629 81851.73006 175763.828 139517.4967 141491.9513 149545.741 1.263834111 1.035332927 1.107995373 1.023388188 1.015369357 0.547335748 1.175318179 0.93294196 0.946144975 1 17.1902273 -4.747350802 0.743467171 0.93374997 1.418106309 0.269909955 0.154302598 4.185673371 1.697935204 0.063437209 1.722988304 1.79E-05 4.747350802 0.48435634 NSSQSGGKPGSS(ph)PITK ddPTM_A459_MK2206_30min_R1 2 NSSQSGGKPGSSPITK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NSS(0.003)QS(0.02)GGKPGS(0.232)S(0.72)PIT(0.024)K;NSSQSGGKPGS(0.193)S(0.508)PIT(0.299)K 65.765 0.030172 169050000 9086.1 10002.2 9623 9458.2 6333.9 5777.7 7147.4 8096.7 7854 7347.2 TRUE FALSE 8313.279482 9351.054962 8969.817571 10186.6722 6081.607351 6104.828381 6670.609987 8025.911406 8670.451406 8257.426605 1.006763957 1.13244179 1.086272758 1.233637632 0.736501533 0.739313672 0.807831581 0.971962791 1.050018586 1 13.01147653 -6.259189047 24.9988172 0.871799627 1.114004496 0.502947598 0.111848847 176.4652051 1960339.325 0.036247303 0.044574025 5.51E-07 6.259189047 0.24220487 NSSQSGGKPGSS(ph)PITK ddPTM_A459_MK2206_30min_R2 2 NSSQSGGKPGSSPITK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NSSQS(0.001)GGKPGS(0.241)S(0.757)PITK;NSSQSGGKPGS(0.211)S(0.789)PITK 210.43 2.19E-07 24707500 144944 139426 151663 139048 141815 109361 164095 120508 104295 147366 TRUE FALSE 156041.0241 132502.3076 156719.3687 127687.3336 136246.6305 113522.8095 142549.1294 136258.8094 113366.3906 142557.4595 1.094583368 0.929465972 1.099341762 0.8956903 0.955731331 0.796330195 0.999941567 0.955816762 0.795232961 1 17.12118401 -5.778137792 24.99935414 0.912668698 1.029963936 0.337798258 0.081032299 273.8554699 409990.8048 0.021842087 0.032495827 1.67E-06 5.778137792 0.117295238 NSSQSLMVPQS(ph)GSPEPESIR ddPTM_A459_MK2206_30min_R2 1 NSSQSLMVPQSGSPEPESIR 20 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970;A0A075B6R8;B7ZB24;H0YGQ3 F5H1U9 MPDZ Multiple PDZ domain protein 1 NSSQSLMVPQS(0.858)GS(0.141)PEPESIR 126.29 0.00021507 13658000 61124 61492 54999 66958 57035 55459 70826 45183 51362 62683 TRUE FALSE 65803.70044 58438.3967 56832.63921 61487.31721 54795.51932 57569.53111 61526.46112 51088.57324 55829.37392 60637.65884 1.085195268 0.963731084 0.937249892 1.014012058 0.903654929 0.949402273 1.014657596 0.842522192 0.920704641 1 15.88792643 NSSQSLMVPQSGS(ph)PEPESIR ddPTM_A459_MK2206_30min_R1 2 NSSQSLMVPQSGSPEPESIR 20 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970;A0A075B6R8;B7ZB24;H0YGQ3 F5H1U9 MPDZ Multiple PDZ domain protein 1 NSSQSLMVPQS(0.071)GS(0.929)PEPESIR;NSSQSLMVPQS(0.025)GS(0.975)PEPESIR 312.01 3.50E-117 23610700 4537 4861.5 4527.6 4115.1 4309.4 3452 3841.9 4048 4211.6 4301.4 TRUE FALSE 4151.104325 4545.015466 4220.279127 4432.045715 4137.747473 3647.449257 3585.613861 4012.608763 4649.410891 4834.289906 0.858679228 0.940161959 0.872988424 0.916793531 0.855916288 0.75449535 0.741704352 0.830030644 0.961756738 1 12.23908828 -4.459065095 15.37117258 0.864479342 0.803311442 0 0.080495959 11820548.04 70432864.16 0.021091261 22596494.81 3.47E-05 4.459065095 -0.061167899 NSSQSLMVPQSGS(ph)PEPESIR ddPTM_A459_MK2206_30min_R2 6 NSSQSLMVPQSGSPEPESIR 20 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970;A0A075B6R8;B7ZB24;H0YGQ3 F5H1U9 MPDZ Multiple PDZ domain protein 1 NSSQSLMVPQS(0.088)GS(0.912)PEPESIR;NSSQSLMVPQS(0.296)GS(0.704)PEPESIR;NSSQSLMVPQS(0.025)GS(0.975)PEPESIR;NSSQSLMVPQS(0.127)GS(0.873)PEPESIR;NSSQSLMVPQS(0.011)GS(0.989)PEPESIR;NSSQSLMVPQS(0.013)GS(0.987)PEPES(0.001)IR 174.65 2.84E-10 33612900 146250.8 161804 149642 155549 154217 146265 174008 140654 138177.4 159039 TRUE FALSE 157447.8737 153769.0486 154630.9896 142840.1491 148161.6657 151831.2171 151160.5406 159037.9607 150195.8205 153849.5705 1.023388452 0.99947662 1.005079112 0.928440351 0.96302944 0.986880994 0.982521694 1.033723788 0.976251153 1 17.23116089 -7.618256026 23.93418773 1.004618149 0.982658997 0.091887254 0.02731374 27.01907705 6759.790345 0.013605015 0.007854859 2.41E-08 7.618256026 -0.021959153 NSSS(ph)PVSLDAALPESSNVYR ddPTM_A459_MK2206_30min_R1 3 NSSSPVSLDAALPESSNVYR 20 0 Q70EL1;Q70EL1-7;H7C1E9;Q70EL1-6;H7C296;R4GN32 Q70EL1 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 NSS(0.005)S(0.995)PVS(0.001)LDAALPESSNVYR;NSS(0.012)S(0.987)PVS(0.001)LDAALPESSNVYR;NSS(0.03)S(0.94)PVS(0.03)LDAALPESSNVYR 237.16 6.41E-30 9585300 2189.42 2267.69 2363.4 1667.14 2090.43 2088.51 2280.2 1836.04 2664.4 2629.1 TRUE FALSE 2003.198332 2120.062969 2202.978993 1795.543412 2007.163747 2206.759631 2128.092018 1819.987696 2941.373915 2954.812757 0.677944255 0.717494861 0.745556208 0.607667409 0.679286274 0.746835692 0.72021214 0.61594011 0.99545188 1 11.528851 -8.270499876 24.98046615 0.997726022 0.691662114 0.88118378 0.045356097 224.5474306 619086.5232 0.04217484 0.011523355 5.36E-09 8.270499876 -0.306063907 NSSS(ph)PVSLDAALPESSNVYR ddPTM_A459_MK2206_30min_R2 1 NSSSPVSLDAALPESSNVYR 20 0 Q70EL1;Q70EL1-7;H7C1E9;Q70EL1-6;H7C296;R4GN32 Q70EL1 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 NSS(0.042)S(0.957)PVS(0.001)LDAALPESSNVYR 159.47 1.09E-06 8489200 16353 11492 10361 10672 10259 10561 14764 13671 12069 16369 TRUE FALSE 17604.99825 10921.32399 10706.43057 9800.063462 9856.180113 10962.90626 12825.46907 15457.84664 13118.7398 15834.88087 1.111785961 0.68970042 0.676129531 0.618890887 0.62243475 0.692326412 0.809950461 0.976189639 0.828471014 1 13.95081839 -7.545661201 4.036307848 0.925491802 0.721172659 0.286079652 0.139486285 0.281239133 10.3994102 0.069602538 0.040059769 2.85E-08 7.545661201 -0.204319142 NSSS(ph)PVSLDAALPESSNVYRDPSAK ddPTM_A459_MK2206_30min_R2 3 NSSSPVSLDAALPESSNVYRDPSAK 25 1 Q70EL1;Q70EL1-7;H7C1E9;Q70EL1-6;H7C296;R4GN32 Q70EL1 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 NS(0.066)S(0.215)S(0.712)PVS(0.006)LDAALPESSNVYRDPSAK;NS(0.08)S(0.202)S(0.517)PVS(0.201)LDAALPESSNVYRDPSAK;NS(0.09)S(0.244)S(0.664)PVS(0.002)LDAALPESSNVYRDPSAK 119.69 4.26E-08 27789200 66077 79555 79300 94432 106279 79451 98755 80165 93219 91631 TRUE FALSE 71135.90592 75604.41438 81943.82242 86716.60353 102105.9525 82474.56348 85788.34987 90642.84075 101327.0201 88641.08797 0.802516164 0.852927419 0.924445134 0.978289025 1.151903195 0.930432662 0.967816978 1.022582674 1.143115709 1 16.43568797 -5.489018168 1.662548942 1.02979641 0.812461147 0.603606893 0.066524916 0.296073198 1.545937692 0.02086181 0.065292905 3.24E-06 5.489018168 -0.217335263 NSSS(ph)PVSPASVPGQR ddPTM_A459_MK2206_30min_R1 2 NSSSPVSPASVPGQR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 NSS(0.019)S(0.981)PVSPASVPGQR;NS(0.001)S(0.019)S(0.371)PVS(0.371)PAS(0.238)VPGQR 178.03 1.96E-05 26786600 11914.6 12349.6 12185.8 11606.8 11312.1 10821.1 11687.7 11128.7 11169.61 11102.1 TRUE FALSE 10901.2007 11545.6388 11358.66185 12500.75775 10861.5151 11433.78133 10908.03486 11031.40295 12330.73093 12477.51196 0.873667822 0.925315786 0.910330672 1.001863014 0.870487252 0.916351061 0.87421554 0.884102775 0.988236354 1 13.60704267 -8.30735547 7.800933106 0.99514526 0.908939819 0.471421556 0.036840744 0.308499046 46.26410252 0.03532632 0.009301958 4.93E-09 8.30735547 -0.086205441 NSSS(ph)PVSPASVPGQR ddPTM_A459_MK2206_30min_R2 1 NSSSPVSPASVPGQR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 NS(0.001)S(0.082)S(0.778)PVS(0.139)PASVPGQR 187.75 2.41E-05 96441000 35949 42001 41149 41948 39050 36680 46780 35738 32578 44095 TRUE FALSE 38701.28308 39915.29142 42520.88712 38520.71421 37516.70079 38075.8831 40637.72981 40409.07931 35411.57555 42656.18376 0.907284236 0.935744549 0.996828206 0.903051113 0.879513765 0.892622821 0.952680859 0.947320546 0.830162767 1 15.38046728 NSSSPVS(ph)LDAALPESSNVYR ddPTM_A459_MK2206_30min_R2 1 NSSSPVSLDAALPESSNVYR 20 0 Q70EL1;Q70EL1-7;H7C1E9;Q70EL1-6;H7C296;R4GN32 Q70EL1 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 NS(0.001)S(0.026)S(0.072)PVS(0.902)LDAALPESSNVYR 74.296 0.0065304 7393800 11334 12608 12479 11383 10251 12538 14421 13131 11242 18890 TRUE FALSE 12201.73975 11981.90505 12895.04363 10452.97249 9848.494233 13015.14238 12527.50538 14847.26679 12219.80884 18273.62085 0.667724249 0.655694082 0.705664397 0.572025247 0.538945966 0.712236643 0.685551347 0.812497255 0.668713056 1 14.15747491 -9.307098658 0.45162564 1.033446459 0.632935594 0.70903043 0.065912451 1.770142693 0.543126279 0.189327075 0.040680412 4.93E-10 9.307098658 -0.400510865 NSSSPVS(ph)LDAALPESSNVYRDPSAK ddPTM_A459_MK2206_30min_R2 1 NSSSPVSLDAALPESSNVYRDPSAK 25 1 Q70EL1;Q70EL1-7;H7C1E9;Q70EL1-6;H7C296;R4GN32 Q70EL1 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 NS(0.014)S(0.068)S(0.171)PVS(0.745)LDAALPES(0.001)S(0.001)NVY(0.001)RDPSAK 47.554 0.028922 6301000 9986.2 16665 16395 14294 18279 14862 15830 14097 16327 21109 TRUE FALSE 10750.75115 15837.44033 16941.60112 13126.13448 17561.27462 15427.58382 13751.50198 15939.5263 17747.09295 20420.21506 0.526475902 0.775576569 0.829648516 0.642800991 0.859994597 0.755505453 0.673425914 0.780575829 0.869094321 1 14.31771044 -14.52287875 0.109904911 1.826896666 0.602000049 0.495961985 0.089669108 155.9031672 1.135178441 28.83928177 1.143615076 3.00E-15 14.52287875 -1.224896617 NSSSPVS(ph)PASVPGQR ddPTM_A459_MK2206_30min_R1 3 NSSSPVSPASVPGQR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 NS(0.008)S(0.028)S(0.356)PVS(0.608)PASVPGQR;NSSSPVS(0.999)PASVPGQR;NSSSPVS(0.992)PAS(0.008)VPGQR 190.18 2.11E-05 22023000 4834.3 4949.6 5130.7 4393.8 5735.3 5031.7 5729.9 4926.3 4549.4 4929.7 TRUE FALSE 4423.117399 4627.38014 4782.442379 4732.211237 5506.850856 5316.590506 5347.668826 4883.229878 5022.32641 5540.428453 0.798334901 0.83520258 0.86318999 0.854123698 0.993939531 0.959599163 0.965208534 0.881381272 0.906487008 1 12.43578183 -6.131049479 5.411914348 0.946033901 0.836571335 0.692219578 0.037083793 0.150229871 5.989347656 0.011830087 0.0154489 7.40E-07 6.131049479 -0.109462566 NSSSPVS(ph)PASVPGQR ddPTM_A459_MK2206_30min_R2 4 NSSSPVSPASVPGQR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 NS(0.009)S(0.029)S(0.323)PVS(0.639)PASVPGQR;NS(0.182)S(0.021)S(0.211)PVS(0.583)PAS(0.003)VPGQR;NSS(0.001)S(0.046)PVS(0.951)PAS(0.001)VPGQR;NS(0.007)S(0.023)S(0.249)PVS(0.722)PASVPGQR 163 0.00010701 44633800 87628 98234 83975 97480 105442 114976 107546 85684 100246 94615 TRUE FALSE 94336.86705 93355.84241 86774.68459 89515.57218 101301.8173 119351.4922 93425.08101 96883.193 108965.2159 91527.7203 1.030691759 1.019973426 0.948069987 0.97801597 1.10678838 1.303992843 1.020729902 1.05851203 1.190516005 1 16.48192113 -6.295781299 6.668838399 1.121712011 0.99268849 0.320627361 0.084573289 0.244060553 35.58957674 0.026589884 0.030669259 5.06E-07 6.295781299 -0.129023521 NSSSSS(ph)SPSERPR ddPTM_A459_MK2206_30min_R2 1 NSSSSSSPSERPR 13 1 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 NS(0.002)S(0.001)S(0.004)S(0.102)S(0.443)S(0.443)PS(0.004)ERPR 63.682 0.044752 514560 0 1158.8 1101.3 2316.4 689.68 754.34 1108 1122.2 2216.6 1175.3 TRUE FALSE 0 1101.255677 1138.016792 2127.14271 662.5996978 783.0469373 962.5182691 1268.875393 2409.395861 1136.950057 0 0.968605147 1.000938243 1.870920096 0.582786987 0.688725888 0.846579199 1.116034416 2.119174757 1 10.15095317 -8.023415551 13.35496991 1.579051312 0.891052579 0.234924126 0.503704273 3.346186833 1901.990444 0.32669473 0.129043281 9.48E-09 8.023415551 -0.687998733 NSSSSSS(ph)PSERPR ddPTM_A459_MK2206_30min_R2 1 NSSSSSSPSERPR 13 1 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 NS(0.001)S(0.001)S(0.017)S(0.072)S(0.311)S(0.593)PS(0.006)ERPR 71.286 0.032075 683850 873.3 582.32 869.37 1093.2 616.36 2042.9 1013 896.16 1097.5 1152.9 TRUE FALSE 940.1605195 553.4028356 898.3543619 1003.882063 592.1586094 2120.643991 879.9918832 1013.291189 1192.958566 1115.280967 0.842980869 0.496200376 0.805496003 0.900115838 0.530950161 1.90144372 0.789031561 0.90855239 1.069648457 1 10.12319149 NSSSST(ph)SPVSK ddPTM_A459_MK2206_30min_R1 2 NSSSSTSPVSK 11 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 NS(0.002)S(0.008)S(0.025)S(0.081)T(0.609)S(0.275)PVSK;NSS(0.001)S(0.002)S(0.056)T(0.467)S(0.467)PVS(0.007)K 114.87 0.014832 1593400 4424.5 3790.3 3191.4 3127.4 1897.23 2092.87 3454.1 4638.7 956.19 2785.9 TRUE FALSE 4048.173041 3543.550781 2974.77666 3368.27289 1821.659312 2211.366491 3223.683291 4598.144335 1055.589372 3131.038324 1.292917116 1.131749411 0.950092701 1.075768656 0.581806776 0.706272572 1.029589215 1.468568525 0.337137161 1 11.61242545 -5.022602146 1.304253905 0.890113333 1.371182009 0.180327168 0.288326915 1.707249943 3.472416881 0.088126469 0.97839222 9.49E-06 5.022602146 0.481068676 NSSSST(ph)SPVSK ddPTM_A459_MK2206_30min_R2 2 NSSSSTSPVSK 11 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 NSSS(0.005)S(0.129)T(0.433)S(0.433)PVSK;NSSSS(0.115)T(0.44)S(0.44)PVS(0.005)K 151.66 0.0013843 8806900 76777 65442 72208 72685 100421 53372 95756 124598 102082 108775 TRUE FALSE 82655.10615 62192.24544 74615.37868 66746.40299 96477.96696 55403.10886 83183.12218 140883.3864 110960.9078 105225.6807 0.785503174 0.591036761 0.70909856 0.634316667 0.916867122 0.526516992 0.790521113 1.338868853 1.054504063 1 16.68312732 -7.625653287 6.101768923 1.143717998 0.694445324 0.694816234 0.1297016 0.105430421 5.389502814 0.058342038 0.033178638 2.37E-08 7.625653287 -0.449272674 NSSTDQGS(ph)DEEGSLQK ddPTM_A459_MK2206_30min_R1 2 NSSTDQGSDEEGSLQK 16 0 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 NSSTDQGS(0.996)DEEGS(0.004)LQK;NSSTDQGS(0.996)DEEGS(0.004)LQK 170.22 1.00E-05 42881000 15011.6 14140.6 15185.9 11861.1 10735.4 11250.5 13275 11675.9 15560.1 16013.7 TRUE FALSE 13734.78459 13220.04437 14155.12342 12774.64398 10307.78629 11887.49359 12389.44897 11573.81884 17177.62808 17997.59805 0.763145424 0.734544928 0.786500697 0.70979716 0.57273122 0.660504449 0.688394581 0.643075748 0.954440033 1 14.13551676 -8.31443871 5.781653595 0.987105708 0.694317536 0.787092873 0.058783427 0.10906537 8.153398932 0.061345251 0.016339316 4.85E-09 8.31443871 -0.292788172 NSSTDQGS(ph)DEEGSLQK ddPTM_A459_MK2206_30min_R2 1 NSSTDQGSDEEGSLQK 16 0 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 NSSTDQGS(1)DEEGSLQK 225.54 7.31E-12 43078000 34481 43110 31623 33827 38895 30778 43932 26757 27717 35853 TRUE FALSE 37120.89187 40969.22009 32677.29504 31063.22589 37367.78687 31949.27836 38163.67563 30254.23177 30127.77456 34683.11955 1.070286997 1.181243805 0.942167125 0.895629525 1.07740559 0.921176606 1.100353028 0.872304227 0.868658153 1 15.08194605 -5.269348489 24.99703194 0.960712558 1.125765403 0.410865574 0.079529122 512.4745546 1619698.843 0.020687719 0.044290113 5.38E-06 5.269348489 0.165052845 NSSTDQGS(ph)DEEGSLQKEQESAMDK ddPTM_A459_MK2206_30min_R2 2 NSSTDQGSDEEGSLQKEQESAMDK 24 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 NS(0.002)S(0.008)T(0.008)DQGS(0.726)DEEGS(0.256)LQKEQESAMDK;NSS(0.003)T(0.008)DQGS(0.494)DEEGS(0.494)LQKEQESAMDK 75.73 0.00022624 23431000 41320.3 50996 57848 55499 70671 43015 74130 50953 54705 63706 TRUE FALSE 44483.81394 48463.6128 59776.62345 50964.55417 67896.10145 44651.96597 64396.64195 57612.73205 59463.14202 61627.27844 0.721820192 0.786398719 0.969970198 0.826980445 1.101721562 0.724548724 1.0449373 0.934857639 0.964883466 1 15.91128146 -5.125875079 3.350256949 0.940913125 0.729801046 0.370532148 0.101046899 0.252036058 5.098303773 0.024592135 0.084929932 7.48E-06 5.125875079 -0.21111208 NSSTETDQQPHS(ph)PDSSSSVHSIR ddPTM_A459_MK2206_30min_R1 2 NSSTETDQQPHSPDSSSSVHSIR 23 0 Q92613 Q92613 JADE3 Protein Jade-3 1 NSSTETDQQPHS(0.992)PDS(0.004)S(0.001)S(0.001)S(0.002)VHSIR;NSSTET(0.027)DQQPHS(0.962)PDS(0.005)S(0.001)S(0.002)S(0.002)VHSIR 120.4 7.01E-06 10798200 2375.3 594.52 1275.85 548.69 3324.9 3492.8 3174.2 1666.51 818.24 688.93 TRUE FALSE 2173.268262 555.8166399 1189.248857 590.9501989 3192.462192 3690.559318 2962.45491 1651.939879 903.2989761 774.2798496 2.806825288 0.717849806 1.535941892 0.763225595 4.123137383 4.766441126 3.826077756 2.133517849 1.16663113 1 9.596711287 -6.251840718 24.97642716 3.038672639 1.408951378 0.211103664 1.269883781 977.8200759 2544359.086 0.397644518 0.506718862 5.60E-07 6.251840718 -1.62972126 NSSTETDQQPHS(ph)PDSSSSVHSIR ddPTM_A459_MK2206_30min_R2 2 NSSTETDQQPHSPDSSSSVHSIR 23 0 Q92613 Q92613 JADE3 Protein Jade-3 1 NS(0.004)S(0.004)T(0.014)ET(0.294)DQQPHS(0.676)PDS(0.005)S(0.002)SSVHSIR;NSSTETDQQPHS(0.919)PDS(0.033)S(0.012)S(0.017)S(0.017)VHS(0.001)IR 91.249 7.89E-05 14444800 20264.9 47775 34058 75196 84610 89904 67522 48659 64140 48947 TRUE FALSE 21816.39633 45402.56297 35193.47672 69052.24626 81287.78627 93325.35972 58656.28029 55018.89837 69718.78126 47349.8634 0.460748876 0.958874212 0.743264588 1.458340981 1.716748063 1.970974212 1.238784573 1.161965303 1.472417791 1 15.53107264 -5.762327377 10.16466091 1.464657735 0.744234058 0.566111597 0.283720693 0.069244905 143.7842655 0.082530314 0.131694645 1.73E-06 5.762327377 -0.720423677 NSSTMLYS(ph)R ddPTM_A459_MK2206_30min_R1 3 NSSTMLYSR 9 0 Q96DR7;Q96DR7-4 Q96DR7 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 NSSTMLY(0.402)S(0.598)R;NSSTMLY(0.381)S(0.619)R;NSSTMLY(0.373)S(0.627)R 101.54 0.016931 457070000 20375.6 21238.6 21360.7 15894.3 16457.1 16170.7 20890.7 16156.9 19967 21374.3 TRUE FALSE 18642.54822 19855.96328 19910.7952 17118.48174 15801.57886 17086.27106 19497.11952 16015.64193 22042.6411 24022.30965 0.776051449 0.826563456 0.828845997 0.712607655 0.65778766 0.711266789 0.811625518 0.666698671 0.917590416 1 14.55208725 -8.451672876 4.708199656 0.99876361 0.751376407 0.675794675 0.059378178 0.11816636 4.687428755 0.061649468 0.016075516 3.53E-09 8.451672876 -0.247387203 NSSTMLYS(ph)R ddPTM_A459_MK2206_30min_R2 2 NSSTMLYSR 9 0 Q96DR7;Q96DR7-4 Q96DR7 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 NSSTMLY(0.336)S(0.664)R;NSSTMLY(0.373)S(0.627)R 107.01 0.012838 67701000 176913 193606 185961 207106 158146 160002 195681 165206 156779 215031 TRUE FALSE 190457.5953 183991.8076 192160.8469 190184.7773 151936.3934 166090.9882 169987.8496 186798.9914 170415.354 208014.5561 0.915597441 0.884514099 0.923785578 0.914285908 0.730412315 0.798458489 0.817192089 0.89800923 0.819247255 1 17.66632496 NSSYFVEWIPNNVK ddPTM_A459_MK2206_30min_R2 1 NSSYFVEWIPNNVK 14 0 P04350;K7ESM5;Q9BUF5;P68371;P07437;Q5JP53;Q5ST81;A0A0B4J269;Q13509;Q13509-2;Q9BVA1;Q13885 P04350;P68371;P07437;A0A0B4J269;Q9BVA1 TUBB4A;TUBB6;TUBB4B;TUBB;TUBB3;TUBB2B;TUBB2A Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta-4B chain;Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 186.16 0.0011399 2653400 21513 17625 20470 20212 20346 16978 19077 11023 16233 16957 FALSE TRUE 23160.05182 16749.76813 21152.45958 18560.61495 19547.11381 17624.10969 16572.16698 12463.74395 17644.917 16403.69448 1.411880223 1.021097299 1.289493633 1.131489919 1.191628742 1.074398801 1.0102704 0.759813222 1.075667254 1 14.00173316 -7.055048603 1.834570913 0.935021024 1.202632571 0.480500765 0.121400695 0.289986965 1.946743129 0.053878411 0.039574523 8.81E-08 7.055048603 0.267611547 NST(ph)ELAPPLPVR ddPTM_A459_MK2206_30min_R1 2 NSTELAPPLPVR 12 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NS(0.405)T(0.595)ELAPPLPVR;NS(0.032)T(0.968)ELAPPLPVR 187.63 0.00027624 57923000 4275 4846.3 5517.8 4125.2 4136.6 4344.7 5319 4260.8 6204.9 7473.2 TRUE FALSE 3911.388801 4530.804989 5143.267109 4442.923619 3971.830463 4590.693159 4964.179215 4223.548275 6849.921559 8399.036436 0.465694944 0.539443426 0.612363948 0.528980158 0.472891205 0.546573788 0.591041514 0.502861049 0.815560405 1 13.03600811 -8.449139185 2.951653843 0.997972642 0.535103015 0.920537842 0.045569251 0.059963236 1.077986579 0.044898791 0.012053501 3.56E-09 8.449139185 -0.462869627 NST(ph)PFMAEHLEETLSAVTNNR ddPTM_A459_MK2206_30min_R2 1 NSTPFMAEHLEETLSAVTNNR 21 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2;B0QYZ7 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 NS(0.262)T(0.738)PFMAEHLEETLSAVTNNR 120.31 0.00010029 2012400 2818.4 3070.8 1550.1 2795.9 1096.4 2825.1 3674.8 1300 1583.1 3499.3 TRUE FALSE 3034.178871 2918.308537 1601.77956 2567.466026 1053.349827 2932.61116 3192.294346 1469.914464 1720.795176 3385.118128 0.896328801 0.862099468 0.473182766 0.758456848 0.311170774 0.866324615 0.943037798 0.43422841 0.508341249 1 11.72499046 -6.920489405 0.005121323 1.379280558 6.46E-07 0.003118235 0.235150838 215195.7678 487.1708372 64803.82443 66383.18061 1.20E-07 6.920489405 -1.379279912 NST(ph)PSSSSSLQK ddPTM_A459_MK2206_30min_R2 2 NSTPSSSSSLQK 12 0 Q9P0U3;Q9P0U3-2;F8VRZ8 Q9P0U3 SENP1 Sentrin-specific protease 1 1 NS(0.009)T(0.927)PS(0.033)S(0.009)S(0.019)S(0.001)SLQK;NS(0.007)T(0.826)PS(0.095)S(0.012)S(0.012)S(0.039)S(0.01)LQK 123.1 0.0051096 0 52419 55899 51121 53678 52893 43036 60587 43516 42738 56497 TRUE FALSE 56432.23894 53123.13694 52825.34863 49292.33569 50816.15505 44673.76514 52631.85412 49203.69061 46455.27399 54653.50752 1.032545604 0.971998676 0.966550017 0.901906171 0.929787627 0.817399782 0.963009631 0.900284224 0.849996205 1 15.73802647 -5.184786032 1.094383173 0.902462859 1.044505559 0.37727266 0.05006144 0.959747081 1.483065426 0.015952978 0.134894234 6.53E-06 5.184786032 0.1420427 NSTGGTSVGWDS(ph)PPASPLQR ddPTM_A459_MK2206_30min_R1 3 NSTGGTSVGWDSPPASPLQR 20 0 Q13424-2;Q13424 Q13424-2 SNTA1 Alpha-1-syntrophin 1 NS(0.001)T(0.002)GGT(0.005)S(0.008)VGWDS(0.975)PPAS(0.009)PLQR;NSTGGTS(0.001)VGWDS(0.999)PPASPLQR;NSTGGTS(0.002)VGWDS(0.998)PPASPLQR 233.89 4.44E-67 13213500 2261.3 2293.1 2827.92 2383.69 2709.05 2145.82 2573.11 2496.44 1853.6 1920.25 TRUE FALSE 2068.96456 2143.818773 2635.968669 2567.282217 2601.142802 2267.314474 2401.462527 2474.613888 2046.288353 2158.145067 0.958677242 0.993361756 1.221404765 1.18957815 1.205267821 1.050584833 1.112743793 1.146639272 0.948169974 1 11.07557613 -8.263225699 24.88587465 0.974084973 1.113590468 0.293437121 0.084060496 203.5359606 2835392.399 0.074093418 0.022973098 5.45E-09 8.263225699 0.139505496 NSTGGTSVGWDS(ph)PPASPLQR ddPTM_A459_MK2206_30min_R2 2 NSTGGTSVGWDSPPASPLQR 20 0 Q13424-2;Q13424 Q13424-2 SNTA1 Alpha-1-syntrophin 1 NSTGGTSVGWDS(0.986)PPAS(0.014)PLQR;NSTGGT(0.04)S(0.128)VGWDS(0.823)PPAS(0.009)PLQR 106.89 0.00046111 18388100 44839 37434 52494 59871 64555 40956 60513 43484 42237 64314 TRUE FALSE 48271.90832 35575.08199 54244.12376 54979.34778 62020.24634 42514.60928 52567.57041 49167.5081 45910.69791 62215.43945 0.775883105 0.571804721 0.871875603 0.883692991 0.996862626 0.683344997 0.844928058 0.790278242 0.737930943 1 15.92498503 NSTGS(ph)GHSAQELPTIR ddPTM_A459_MK2206_30min_R2 1 NSTGSGHSAQELPTIR 16 0 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 NS(0.339)T(0.086)GS(0.574)GHSAQELPTIR 98.676 0.0070591 0 17004 24111 18784 23890 29276 26453 25207 20543 24786 26805 TRUE FALSE 18305.83931 22913.6828 19410.24918 21938.11058 28126.47714 27459.68745 21897.29062 23228.04063 26941.84148 25930.35505 0.705961769 0.883662517 0.748553159 0.84603973 1.084693098 1.05897846 0.844465515 0.895785676 1.039007813 1 14.66235434 -6.058125454 6.535775386 0.978012405 0.790704574 0.583125684 0.080235384 0.186187168 16.89233592 0.024888917 0.032642868 8.75E-07 6.058125454 -0.187307831 NSTLPMEET(ph)SPCSSR ddPTM_A459_MK2206_30min_R1 1 NSTLPMEETSPCSSR 15 0 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 NSTLPMEET(0.721)S(0.279)PCSSR 175.27 4.66E-05 5814100 1505.3 1588.6 1703.7 1617.1 1501.7 1445.3 1482.2 1481 1528.4 1428.7 TRUE FALSE 1377.26633 1485.181851 1588.057591 1741.649322 1441.884109 1527.131637 1383.325142 1468.051773 1687.282649 1605.698142 0.857736765 0.924944616 0.989013781 1.084667956 0.897979559 0.95107019 0.861510085 0.91427631 1.050809368 1 10.64898499 -8.260938083 24.99986108 1.025404689 0.938426132 0.243505149 0.063422547 70.16737167 3499788.925 0.052784749 0.017170251 5.48E-09 8.260938083 -0.086978557 NSTLPMEET(ph)SPCSSR ddPTM_A459_MK2206_30min_R2 1 NSTLPMEETSPCSSR 15 0 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 NSTLPMEET(0.642)S(0.308)PCS(0.043)S(0.006)R 145.04 0.00086683 10408000 38825 44263 40317 43970 45717 41389 41692 32879 32307 41010 TRUE FALSE 41797.47185 42064.96378 41661.14866 40377.51035 43921.92087 42964.0874 36217.79032 37176.39819 35117.00446 39671.84706 1.053580182 1.060322796 1.050143912 1.017787508 1.107130727 1.082986818 0.91293431 0.937097739 0.88518703 1 15.27582795 -7.262993311 24.99994102 0.928562909 1.061420037 0.766941722 0.03456882 63.66560569 1024250.604 0.013731164 0.009809306 5.46E-08 7.262993311 0.132857128 NSTLPMEETS(ph)PCSSR ddPTM_A459_MK2206_30min_R1 2 NSTLPMEETSPCSSR 15 0 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 NSTLPMEET(0.389)S(0.61)PCSSR;NSTLPMEET(0.056)S(0.944)PCS(0.001)SR 194.67 3.27E-05 9955300 3525 3382.9 3554 3100.1 3221.8 2664.4 2845.8 3032.7 2974.8 2503.7 TRUE FALSE 3225.180239 3162.672595 3312.764382 3338.870239 3093.468884 2815.256025 2655.961874 3006.185424 3284.041105 2813.877258 1.146169482 1.12395542 1.177295269 1.186572808 1.099361699 1.000489989 0.94387979 1.06834277 1.167087547 1 11.45834368 -6.532517097 4.675207068 1.03501774 1.15648891 0.511348895 0.056444611 0.173932279 10.02180478 0.020111654 0.021031098 2.93E-07 6.532517097 0.12147117 NSTLPMEETS(ph)PCSSR ddPTM_A459_MK2206_30min_R2 1 NSTLPMEETSPCSSR 15 0 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 NSTLPMEET(0.233)S(0.767)PCSSR 159.64 0.00013585 8929300 32400 35238 25677 35380 34941 30512 37047 25620 34127 31648 TRUE FALSE 34880.56891 33488.13216 26533.05836 32489.34082 33569.04078 31673.15554 32182.6844 28968.62197 37095.30477 30615.32835 1.139317159 1.093835473 0.866659278 1.061211575 1.096478221 1.034552208 1.051195141 0.946213009 1.21165791 1 14.90196654 NSVHEQEAINS(ph)DPELSNCENFQK ddPTM_A459_MK2206_30min_R1 1 NSVHEQEAINSDPELSNCENFQK 23 0 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 NSVHEQEAINS(1)DPELSNCENFQK 225.65 5.61E-28 7897100 1358.6 864.19 1244.6 704.09 1490.3 1738.7 1619.5 1295.4 765.13 695.07 TRUE FALSE 1243.043936 807.9310739 1160.12002 758.3191338 1430.938195 1837.143691 1511.46611 1284.074454 844.6680015 781.1805191 1.591237755 1.034243756 1.485085702 0.970734824 1.831763799 2.351753079 1.934848698 1.64376149 1.081271205 1 9.609512162 -6.277018745 24.74228042 1.723027918 1.268802526 0.145863587 0.410791463 1132.268679 1798201.724 0.130094934 0.148031627 5.28E-07 6.277018745 -0.454225392 NSVHEQEAINS(ph)DPELSNCENFQK ddPTM_A459_MK2206_30min_R2 4 NSVHEQEAINSDPELSNCENFQK 23 0 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 NSVHEQEAINS(1)DPELSNCENFQK;NSVHEQEAINS(1)DPELSNCENFQK;NSVHEQEAINS(0.996)DPELS(0.004)NCENFQK;NSVHEQEAINS(1)DPELSNCENFQK 175.43 4.14E-16 43285900 72233.8 116516 99745.4 143351 152454 150392.5 157305 99144 120970.4 115972.8 TRUE FALSE 77764.07527 110729.9849 103070.8619 131638.7647 146467.8899 156115.792 136650.6645 112102.4612 131492.1867 112188.617 0.693154772 0.986998394 0.91872834 1.173370064 1.305550365 1.391547521 1.218043935 0.999232045 1.172063532 1 16.77556678 -5.274391358 1.263275137 1.195022044 0.722148888 0.559591814 0.12954793 0.547148183 1.31211769 0.044042551 0.267667452 5.32E-06 5.274391358 -0.472873156 NSWDS(ph)PAFSNDVIR ddPTM_A459_MK2206_30min_R2 1 NSWDSPAFSNDVIR 14 0 A0A0C4DGT3;A0A3B3IU98;A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695 A0A0C4DGT3;A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 NS(0.003)WDS(0.787)PAFS(0.21)NDVIR 82.029 0.030693 20029000 8665.2 6944.5 8647.5 8904.3 8879.7 7086.3 8137.3 4939.3 6981 9096.6 TRUE FALSE 9328.614374 6599.646228 8935.803334 8176.790207 8531.038361 7355.974112 7068.862735 5584.883469 7588.194761 8799.778687 1.060096476 0.74997866 1.015457735 0.929204074 0.969460559 0.835927172 0.803300059 0.63466181 0.862316546 1 13.10325153 -6.906411205 4.281244051 0.797300379 0.936740993 0.193449004 0.113768678 0.308153264 10.31724334 0.039741589 0.034722367 1.24E-07 6.906411205 0.139440614 NSYATTENKT(ph)LPR ddPTM_A459_MK2206_30min_R1 1 NSYATTENKTLPR 13 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 NSYATT(0.002)ENKT(0.998)LPR 155.37 0.0037886 12487000 2215.2 2305.2 2238.5 2082.6 1828.8 1438.4 1741.6 1633.8 1547.6 1404.6 TRUE FALSE 2026.785608 2155.131061 2086.556857 2243.002213 1755.955023 1519.840965 1625.421042 1619.515859 1708.478558 1578.612452 1.283903218 1.365205917 1.321766374 1.420869454 1.112340791 0.962770161 1.02965173 1.025910987 1.082265984 1 10.62444132 -6.411084626 4.304551809 1.023333174 1.345970735 0.926083604 0.043793482 0.056101679 1.729094856 0.013770484 0.01557595 3.88E-07 6.411084626 0.322637561 NSYATTENKT(ph)LPR ddPTM_A459_MK2206_30min_R2 1 NSYATTENKTLPR 13 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 NSYATTENKT(1)LPR 125.39 0.022111 7821500 20747 29060 22418 18764 19961 14667 21033 15209 15221 13845 TRUE FALSE 22335.40627 27616.92266 23165.40493 17230.92118 19177.23084 15225.16296 18271.34183 17196.86852 16544.89507 13393.23878 1.667662813 2.0620048 1.729634281 1.286538787 1.431859101 1.136779774 1.364221316 1.283996261 1.235316964 1 13.70921726 -5.700314151 3.471743117 1.263652902 1.873155759 0.772053409 0.143204388 0.098897101 2.394124258 0.037897126 0.067872204 1.99E-06 5.700314151 0.609502857 NSYNNSQAPS(ph)PGLGSK ddPTM_A459_MK2206_30min_R1 2 NSYNNSQAPSPGLGSK 16 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 NSYNNSQAPS(1)PGLGSK;NSYNNS(0.001)QAPS(0.999)PGLGSK 231.38 8.14E-52 6949000 6116.5 6625.2 7607.7 6206.3 4508.4 3953.1 5186.6 5511.6 6084.2 5220.4 TRUE FALSE 5596.259556 6193.898276 7091.31052 6684.310301 4328.820881 4176.921106 4840.611377 5463.412662 6716.674363 5867.142564 0.953830505 1.055692479 1.208648067 1.139278657 0.737807346 0.711917439 0.825037286 0.931187985 1.144794811 1 12.51844233 -6.24528967 24.74754973 0.876018862 1.095477848 0.34382064 0.132536473 831.108968 1273577.097 0.042491402 0.054676105 5.68E-07 6.24528967 0.219458986 NSYNNSQAPS(ph)PGLGSK ddPTM_A459_MK2206_30min_R2 2 NSYNNSQAPSPGLGSK 16 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 NSYNNSQAPS(1)PGLGSK;NS(0.001)Y(0.072)NNS(0.163)QAPS(0.764)PGLGSK 248.46 2.67E-29 56200000 203327 238163 235300 213484 214926 157031 243630 182629 159088 217696 TRUE FALSE 218893.8715 226336.1717 243144.7846 196041.6743 206486.9253 163006.9247 211641.0883 206499.2374 172925.1867 210592.5973 1.039418642 1.074758442 1.154574224 0.930904869 0.980504196 0.774039196 1.004978765 0.98056266 0.821136112 1 17.6840952 -5.77837735 24.30587661 0.925685864 1.088101204 0.484330739 0.076647086 139.2489798 199820.9992 0.021316077 0.031718402 1.67E-06 5.77837735 0.16241534 NSYVAGQYDDAASYQR ddPTM_A459_MK2206_30min_R1 2 NSYVAGQYDDAASYQR 16 0 P11413-3;P11413;P11413-2;E7EUI8;E9PD92;E7EM57 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 191.63 1.48E-05 4658700 2939.1 2335.87 2686.47 2749.17 2996.8 2265.5 2555.07 2657.47 2366.2 2146.4 FALSE TRUE 2689.114111 2183.804438 2504.119901 2960.91155 2877.43111 2393.770652 2384.625942 2634.23602 2612.174958 2412.312236 1.114745459 0.905274369 1.038057953 1.227416379 1.192810394 0.992313771 0.988522923 1.091996293 1.082851099 1 11.23620094 -12.21766962 1.673250031 5.34E-05 1.068775285 0.050576833 0.091304565 2194926.738 83156.53369 8326793.755 0.025284207 6.06E-13 12.21766962 1.068721845 NSYVAGQYDDAASYQR ddPTM_A459_MK2206_30min_R2 4 NSYVAGQYDDAASYQR 16 0 P11413-3;P11413;P11413-2;E7EUI8;E9PD92;E7EM57 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ;;; 255.91 2.38E-29 40963300 85469.6 93578.2 97601.3 89025.3 93934.5 85952.1 112165 74023.6 84926.9 89518 FALSE TRUE 92013.21829 88931.24266 100855.2786 81751.64821 90246.15955 89223.0674 97437.60077 83698.73868 92313.68825 86597.03499 1.062544674 1.026954822 1.164650483 0.944046736 1.04213914 1.030324738 1.125184029 0.966531229 1.066014423 1 16.40203001 -7.587579812 0.00645323 1.36E-07 2.07576334 0.055173033 0.061760915 9442.539186 50.5879959 8090.755996 8176.257043 2.58E-08 7.587579812 2.075763204 NTAAEEHVAQGDATLEHS(ph)TNLDSSPSLSSVTVVPLR ddPTM_A459_MK2206_30min_R1 1 NTAAEEHVAQGDATLEHSTNLDSSPSLSSVTVVPLR 36 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 NTAAEEHVAQGDAT(0.037)LEHS(0.358)T(0.358)NLDS(0.122)S(0.1)PS(0.019)LS(0.004)S(0.002)VTVVPLR 60.815 0.00012706 7760200 504.99 467.97 656.54 395.28 836.48 697.53 616.6 413.58 468.3 450.63 TRUE FALSE 462.0379487 437.5050679 611.975894 425.7245341 803.1612303 737.0235458 575.4677391 409.9641137 516.9814608 506.4574465 0.912293722 0.86385356 1.208346127 0.840592901 1.585841488 1.455252659 1.136260792 0.809473958 1.020779662 1 8.984297246 NTAAEEHVAQGDATLEHSTNLDS(ph)SPSLSSVTVVPLR ddPTM_A459_MK2206_30min_R2 2 NTAAEEHVAQGDATLEHSTNLDSSPSLSSVTVVPLR 36 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 NTAAEEHVAQGDAT(0.001)LEHS(0.002)T(0.002)NLDS(0.613)S(0.177)PS(0.177)LS(0.02)S(0.007)VT(0.003)VVPLR;NTAAEEHVAQGDAT(0.002)LEHS(0.016)T(0.007)NLDS(0.458)S(0.458)PS(0.047)LS(0.007)S(0.003)VT(0.002)VVPLR 68.353 1.99E-05 10098600 9732.8 17285 14313.6 18970.5 17571.8 21096.3 21229.2 12124.1 12893.6 17160.7 TRUE FALSE 10477.95065 16426.65203 14790.80828 17420.54947 16881.84284 21899.13448 18441.78054 13708.7615 14015.06202 16600.74776 0.631173415 0.989512778 0.890972412 1.04938342 1.016932676 1.319165545 1.110900593 0.825791807 0.844242815 1 14.01896061 -4.365618176 1.474214916 1.022064003 1.27E-17 0.398750208 0.136340085 3.970427381 3.518455649 0.042451732 8.037133309 4.31E-05 4.365618176 -1.022064003 NTAAEEHVAQGDATLEHSTNLDSS(ph)PSLSSVTVVPLR ddPTM_A459_MK2206_30min_R2 2 NTAAEEHVAQGDATLEHSTNLDSSPSLSSVTVVPLR 36 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 NTAAEEHVAQGDATLEHSTNLDS(0.22)S(0.716)PS(0.056)LS(0.006)S(0.002)VT(0.001)VVPLR;NTAAEEHVAQGDATLEHS(0.005)T(0.005)NLDS(0.27)S(0.587)PS(0.097)LS(0.022)S(0.011)VT(0.003)VVPLR 90.773 9.26E-10 11053200 19528.3 32430 28197 43662 40579 42794 43430 30218 28928 31838 TRUE FALSE 21023.40166 30819.57336 29137.07391 40094.67493 38985.66457 44422.55566 37727.58883 34167.59635 31444.10515 30799.12867 0.682597287 1.000663807 0.946035656 1.301811988 1.26580414 1.442331572 1.224956369 1.109368928 1.020941387 1 14.91060192 -4.955951266 1.213329742 1.207441213 0.578418998 0.535355199 0.140551384 0.892112628 1.39703495 0.045934062 0.655925547 1.11E-05 4.955951266 -0.629022215 NTADHDES(ph)PPR ddPTM_A459_MK2206_30min_R2 1 NTADHDESPPR 11 0 O95251;O95251-4 O95251 KAT7 Histone acetyltransferase KAT7 1 NTADHDES(1)PPR 87.932 0.020743 3456700 29461 28300 29059 30646 27491 30291 29751 23798 21666 33775 TRUE FALSE 31716.55681 26894.66315 30027.81256 28142.12377 26411.56521 31443.74523 25844.65796 26908.48031 23550.46952 32672.92452 0.970729045 0.823148327 0.919042694 0.861328583 0.808362447 0.96237927 0.791011467 0.82357122 0.72079466 1 14.99580797 -7.297438096 24.98773424 0.819141938 0.883947917 0.088989867 0.082479239 1254.68028 870904.6524 0.032328022 0.02179619 5.04E-08 7.297438096 0.06480598 NTAPS(ph)PGPSVIR ddPTM_A459_MK2206_30min_R2 3 NTAPSPGPSVIR 12 0 Q9H7P9;E7ESZ3;Q9H7P9-2;M0QX05 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 NT(0.005)APS(0.995)PGPSVIR;NT(0.001)APS(0.99)PGPS(0.009)VIR;NTAPS(0.998)PGPS(0.001)VIR 153.2 0.00047525 34111600 227777 241074 225873 271658 219631 244812 242573 187356 216385 245813 TRUE FALSE 245215.7823 229102.6157 233403.4931 249462.6724 211007.1834 254128.4922 210722.8737 211844.0725 235205.7762 237792.1419 1.031219031 0.963457471 0.98154418 1.049078705 0.887359783 1.068700127 0.88616416 0.890879197 0.989123418 1 17.85934152 -7.280957276 24.98181841 0.932448301 0.992069011 0.16755682 0.058475714 1360.491122 1741345.854 0.023246031 0.015695997 5.24E-08 7.280957276 0.059620709 NTASQNS(ph)ILEEGETK ddPTM_A459_MK2206_30min_R1 1 NTASQNSILEEGETK 15 0 Q15398-1;Q15398;Q15398-3 Q15398-1 DLGAP5 Disks large-associated protein 5 1 NTASQNS(1)ILEEGETK 305.55 3.73E-197 0 2969.2 3462 2710.3 1714.6 2112.6 2160.6 2628.5 2112.8 2798 3214.3 TRUE FALSE 2716.653948 3236.623171 2526.332387 1846.658789 2028.450668 2282.931305 2453.157561 2094.328012 3088.862113 3612.511751 0.752012488 0.895948136 0.69932849 0.511184161 0.561507009 0.631951247 0.679072548 0.579742893 0.855045554 1 11.81878657 -8.488955748 4.147713683 0.998983854 0.664550387 0.534480156 0.102741642 0.157445522 6.547919957 0.111774551 0.029268124 3.24E-09 8.488955748 -0.334433467 NTASQNS(ph)ILEEGETK ddPTM_A459_MK2206_30min_R2 2 NTASQNSILEEGETK 15 0 Q15398-1;Q15398;Q15398-3 Q15398-1 DLGAP5 Disks large-associated protein 5 1 NTASQNS(1)ILEEGETK;NTASQNS(0.999)ILEEGETK 197.38 2.85E-05 8922300 65824 48436 57027 54102 47487 37237.6 58020 44825.4 37264.5 68178 TRUE FALSE 70863.53605 46030.73867 58928.25172 49681.69354 45622.42178 38654.70296 50401.90431 50684.23369 40505.69885 65953.35744 1.074449259 0.697928664 0.893483729 0.753285283 0.69173767 0.586091512 0.764205285 0.768486028 0.614156738 1 16.00915848 -4.756722676 24.9852804 0.742669185 1.074449765 0.405570132 0.116548258 138.8346922 735345.7314 0.027953229 0.220757542 1.75E-05 4.756722676 0.33178058 NTDDDRPPRR ddPTM_A459_MK2206_30min_R2 1 NTDDDRPPRR 10 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 112.11 0.0053532 1212700 2575.5 5210.3 4864.8 3921.8 4767.6 5220.9 4547.1 4177 3926 4649.6 FALSE TRUE 2772.68226 4951.564078 5026.990004 3601.376395 4580.400069 5419.585008 3950.060308 4722.948242 4267.476383 4497.883933 0.616441487 1.100865241 1.117634443 0.800682376 1.018345546 1.204918822 0.878204144 1.050037821 0.948774234 1 12.13503072 -4.753637119 24.94510532 1.013381598 0.616440752 0.532467752 0.111554472 221.4242156 707870.7148 0.02763991 0.29099988 1.76E-05 4.753637119 -0.396940846 NTDQASMPDNTAAQK ddPTM_A459_MK2206_30min_R1 2 NTDQASMPDNTAAQK 15 0 P35579;A0A494C024;P35579-2;P35749-4;P35749-3;P35749;P35749-2 P35579;P35579-2;P35749-4 MYH9;MYH11 Myosin-9;Myosin-11 0 ; 222.81 1.78E-07 27894000 6300.3 6648.1 6739.6 5439.5 5400.1 5005.3 5692 5614.5 5434.6 5423.9 FALSE TRUE 5764.426401 6215.307482 6282.13473 5858.451232 5185.002582 5288.695761 5312.297066 5565.413018 5999.546118 6095.85368 0.945630703 1.01959591 1.030558648 0.961055094 0.850578582 0.867589027 0.871460725 0.912983367 0.984201136 1 12.57361256 -6.01893694 7.928975531 0.905544386 1.000042964 0.358029134 0.050063561 0.185678252 62.37947401 0.014820997 0.020083043 9.57E-07 6.01893694 0.094498577 NTDVAQS(ph)PEAPK ddPTM_A459_MK2206_30min_R1 2 NTDVAQSPEAPK 12 0 Q9P2E9;A0A087WVV2;Q9P2E9-3;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 NT(0.025)DVAQS(0.975)PEAPK;NT(0.001)DVAQS(0.999)PEAPK 108.66 0.0079681 23767000 13613.9 14828.5 13087.5 10993.4 8690 9243.6 11565.6 8652.5 16964.4 18096.8 TRUE FALSE 12455.96632 13863.16195 12199.15696 11840.11357 8343.858899 9766.964644 10794.07993 8576.852105 18727.91009 20338.76821 0.612424813 0.681612663 0.59979822 0.582145067 0.410244063 0.480214168 0.530714536 0.421699683 0.920798639 1 14.31194469 -8.350905692 5.338219628 0.986765015 0.541859674 0.808901417 0.081928828 0.103645684 4.559399834 0.087356171 0.022852922 4.46E-09 8.350905692 -0.444905341 NTDVAQS(ph)PEAPK ddPTM_A459_MK2206_30min_R2 3 NTDVAQSPEAPK 12 0 Q9P2E9;A0A087WVV2;Q9P2E9-3;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 NTDVAQS(1)PEAPK;NTDVAQS(1)PEAPK;NTDVAQS(1)PEAPK 101.75 0.012241 40314900 267201 188936 194779 184199 158558 128374 247151 180181 113357 241181 TRUE FALSE 287658.114 179553.713 201272.8346 169149.3525 152332.2162 133259.3625 214699.7768 203731.2754 123216.587 233311.2837 1.232936999 0.769588638 0.862679385 0.724994307 0.652914055 0.571165528 0.920228861 0.873216555 0.528120994 1 17.83189656 NTDVAQS(ph)PEAPKQEAPAK ddPTM_A459_MK2206_30min_R1 4 NTDVAQSPEAPKQEAPAK 18 1 Q9P2E9;A0A087WVV2;Q9P2E9-3;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 NT(0.008)DVAQS(0.992)PEAPKQEAPAK;NTDVAQS(1)PEAPKQEAPAK;NT(0.001)DVAQS(0.999)PEAPKQEAPAK;NT(0.011)DVAQS(0.989)PEAPKQEAPAK 94.384 0.0023412 77077000 21348.9 22158.3 19886.5 19951.6 16990.2 14431.2 15453.1 16693.6 17263.5 13168.7 TRUE FALSE 19533.06395 20715.79064 18536.65979 21488.27569 16313.44436 15248.28207 14422.25189 16547.64962 19058.1026 14800.13797 1.319789314 1.399702535 1.252465336 1.451896984 1.102249478 1.030279724 0.974467395 1.11807401 1.287697631 1 13.85332301 -6.316296008 8.049448744 1.082397881 1.351498748 0.665686848 0.093885829 0.204182486 27.73679041 0.029783496 0.033863234 4.83E-07 6.316296008 0.269100867 NTDVAQS(ph)PEAPKQEAPAK ddPTM_A459_MK2206_30min_R2 4 NTDVAQSPEAPKQEAPAK 18 1 Q9P2E9;A0A087WVV2;Q9P2E9-3;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 NT(0.004)DVAQS(0.996)PEAPKQEAPAK;NT(0.005)DVAQS(0.995)PEAPKQEAPAK;NT(0.007)DVAQS(0.993)PEAPKQEAPAK;NT(0.001)DVAQS(0.999)PEAPKQEAPAK 84.156 0.0044885 178030000 386592 441173 411920 426069 373420 278160 494794 372894 261739 458899 TRUE FALSE 416189.7808 419264.9903 425653.2072 391257.7998 358757.6545 288745.5737 429826.9534 421632.5261 284504.5851 443925.1632 0.937522392 0.944449707 0.958840008 0.881359815 0.80814895 0.650437501 0.968241922 0.949782894 0.640884114 1 18.75995696 -5.958283963 3.784022591 0.831575997 0.945999201 0.156407859 0.114500212 0.418609217 12.73799328 0.033665501 0.050368923 1.10E-06 5.958283963 0.114423205 NTEAS(ph)SEEESSASR ddPTM_A459_MK2206_30min_R1 1 NTEASSEEESSASR 14 0 C9J879;Q9H3R0-3;Q9H3R0-4;Q9H3R0-2;Q9H3R0 C9J879 KDM4C Lysine-specific demethylase 4C 1 NTEAS(0.759)S(0.241)EEESSASR 115.58 0.0027757 366030 192.15 75.632 229.65 185.27 311.12 181.16 215.1 70.022 169.24 240.31 TRUE FALSE 175.8066335 70.70834305 214.0619978 199.5395275 298.7274316 191.4171226 200.7510715 69.40980504 186.8331036 270.081417 0.650939392 0.261803807 0.792583215 0.738812502 1.106064367 0.70873859 0.743298349 0.256995856 0.69176586 1 8.077250568 -5.280800221 24.48507965 0.738167366 0.456371565 0.213363906 0.227409507 915.636435 1157977.399 0.062301821 0.130024056 5.24E-06 5.280800221 -0.281795801 NTEASS(ph)EEESSASR ddPTM_A459_MK2206_30min_R1 1 NTEASSEEESSASR 14 0 C9J879;Q9H3R0-3;Q9H3R0-4;Q9H3R0-2;Q9H3R0 C9J879 KDM4C Lysine-specific demethylase 4C 1 NTEAS(0.237)S(0.762)EEESSASR 116.87 0.0033734 0 72.022 178.23 272.74 207.08 130.41 147.89 0 145.44 154.86 174.78 TRUE FALSE 65.8961507 166.6271946 254.2271687 223.0293375 125.2154936 156.263404 0 144.1684334 170.9582512 196.4330659 0.335463637 0.848264491 1.294217791 1.135396103 0.637446109 0.795504582 0 0.733931595 0.870313001 1 7.617893991 -6.312067675 15.68252662 0.632036223 0.927315603 0.090093802 0.341061481 12.86061334 3982.205115 0.110566904 0.125380153 4.87E-07 6.312067675 0.29527938 NTEDLTEEWLR ddPTM_A459_MK2206_30min_R2 1 NTEDLTEEWLR 11 0 G3V4P8;P60983 G3V4P8 GMFB Glia maturation factor beta 0 126.71 0.043032 2361200 6433.3 8768.1 8327.1 10053 10083 11200 9316 8119.3 10083 9363.6 FALSE TRUE 6925.838394 8332.688904 8604.721358 9231.637742 9687.090757 11626.22385 8092.798009 9180.520388 10960.00111 9058.066499 0.764604499 0.919919158 0.949951224 1.019162063 1.069443546 1.283521583 0.893435482 1.013518767 1.209971368 1 13.14498742 -4.934868597 0.912204957 1.077321058 0.659629041 0.466960075 0.104279504 1.659482527 1.275341767 0.037970054 0.658261366 1.16E-05 4.934868597 -0.417692017 NTEES(ph)SSPVRK ddPTM_A459_MK2206_30min_R1 1 NTEESSSPVRK 11 1 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NTEES(0.333)S(0.333)S(0.333)PVRK 176.99 0.00012076 4978800 2823.9 2729.4 2353 2421.2 2115.3 1706.8 2716.8 2717.8 385.11 1496.1 TRUE FALSE 2583.712476 2551.715564 2193.284916 2607.681244 2031.043122 1803.437541 2535.567229 2694.038561 425.1435626 1681.448163 1.536599541 1.517570164 1.304402338 1.550854377 1.207913016 1.072550187 1.507966338 1.602213271 0.252843693 1 10.71548859 -8.25353782 24.99942087 0.626421825 1.402048814 0.646642891 0.232334009 317.9764486 1006040.599 0.159663789 0.057924552 5.58E-09 8.25353782 0.77562699 NTEES(ph)SSPVRK ddPTM_A459_MK2206_30min_R2 1 NTEESSSPVRK 11 1 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NT(0.012)EES(0.329)S(0.329)S(0.329)PVRK 63.727 0.043905 276090000 83772 83665 87069 89282 94164 77263 104340 75995 94453 87748 TRUE FALSE 90185.64873 79510.31776 89971.837 81987.375 90466.64822 80203.29761 90640.03267 85927.80743 102668.3512 84884.78995 1.062447687 0.936685098 1.059928841 0.9658665 1.06575805 0.944848867 1.067800636 1.012287448 1.20950233 1 16.37321845 -8.115382393 20.75731824 1.106825533 1.012900656 0.224057091 0.067142936 7.693899624 1367.983631 0.040680246 0.015375594 7.67E-09 8.115382393 -0.093924877 NTEESS(ph)SPVR ddPTM_A459_MK2206_30min_R2 1 NTEESSSPVR 10 0 Q5T200;Q5T9K0;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NTEES(0.08)S(0.63)S(0.29)PVR 97.779 0.020266 22261000 51328 47095 39734 46570 45568 40776 52207 36980 41606 50658 TRUE FALSE 55257.71114 44756.33078 41058.71173 42765.08203 43778.77136 42327.75925 45352.15819 41813.41297 45224.81467 49005.03361 1.127592557 0.913300685 0.837846823 0.87266713 0.893352542 0.863743092 0.925459179 0.853247307 0.922860599 1 15.58064232 -4.766611769 4.519956704 0.888997901 1.146283085 0.706408428 0.044314435 0.094758036 4.309433708 0.010154753 0.078948103 1.71E-05 4.766611769 0.257285184 NTEESS(ph)SPVRK ddPTM_A459_MK2206_30min_R1 1 NTEESSSPVRK 11 1 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NTEES(0.108)S(0.446)S(0.446)PVRK 102.97 0.024698 5462000 5597.8 5435.3 5121.2 5041.6 3385.7 3176.3 5164.4 5441 587.3 2987 TRUE FALSE 5121.677715 5081.460982 4773.587212 5429.904906 3250.8404 3356.139361 4819.892299 5393.429911 648.3519367 3357.052111 1.525647367 1.513667591 1.421958032 1.617462204 0.968361614 0.99972811 1.435751409 1.606597018 0.193131329 1 11.71297922 -6.748071142 0.374571812 0.86212253 1.64335809 0.289584253 0.356447134 2.424666099 0.698667732 0.397316975 0.727604327 1.79E-07 6.748071142 0.78123556 NTEESSS(ph)PVRK ddPTM_A459_MK2206_30min_R1 3 NTEESSSPVRK 11 1 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NTEES(0.196)S(0.196)S(0.607)PVRK;NTEES(0.132)S(0.132)S(0.736)PVRK;NT(0.003)EES(0.095)S(0.095)S(0.806)PVRK 192.65 3.62E-05 183369000 28596.9 28201.8 24165.9 25125.4 16584.8 15292.6 24601 26464.4 424.09 15190.4 TRUE FALSE 26164.58349 26365.85769 22525.58604 27060.56266 15924.1923 16158.4538 22959.91218 26233.02454 468.1756731 17072.30143 1.532575065 1.544364584 1.319422933 1.585056518 0.932750184 0.946471913 1.344863331 1.53658396 0.027423114 1 14.05936993 -6.382165294 0.400127964 0.816394891 1.686496267 0.307217174 0.378810689 2.443587469 0.71760529 0.379776097 0.893058837 4.15E-07 6.382165294 0.870101376 NTEESSS(ph)PVRK ddPTM_A459_MK2206_30min_R2 2 NTEESSSPVRK 11 1 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NTEES(0.185)S(0.185)S(0.63)PVRK;NTEES(0.171)S(0.171)S(0.658)PVRK 159.66 0.0010522 29944000 190983 220073 203751 199699 217711 181310 225881 209932 182550 198807 TRUE FALSE 205604.8053 209144.4948 210543.9566 183382.9529 209162.5722 188209.8791 196222.5534 237370.8332 198427.869 192319.9439 1.069076879 1.087482092 1.09475883 0.953530607 1.087576088 0.978629025 1.020292277 1.234249701 1.031759187 1 17.55314885 NTENCDFLFS(ph)PPEVTGR ddPTM_A459_MK2206_30min_R1 4 NTENCDFLFSPPEVTGR 17 0 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91;Q8IX09;C9JWI7;F8WC55 A0A494BZT8 TACC3;ERIC-1s Transforming acidic coiled-coil-containing protein 3 1 NTENCDFLFS(1)PPEVTGR;NTENCDFLFS(0.997)PPEVT(0.003)GR;NTENCDFLFS(0.996)PPEVT(0.004)GR;NTENCDFLFS(1)PPEVTGR 179.1 1.99E-09 13586800 3577.18 3967.64 3155.13 3280.76 3037.42 3380.89 3184.26 3254.64 3206.48 2610.08 TRUE FALSE 3272.922056 3709.345915 2940.968566 3533.444704 2916.43313 3572.31307 2971.843825 3226.185026 3539.805071 2933.436415 1.115729674 1.264505307 1.002567688 1.204541092 0.994203629 1.217791206 1.013092975 1.099797156 1.206709323 1 11.51837601 -7.996520807 0.012603422 3.92E-07 2.192388227 0.100225643 0.095010018 1457.567392 18.72502104 1629.120815 1623.951544 1.01E-08 7.996520807 2.192387834 NTENCDFLFS(ph)PPEVTGR ddPTM_A459_MK2206_30min_R2 1 NTENCDFLFSPPEVTGR 17 0 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91;Q8IX09;C9JWI7;F8WC55 A0A494BZT8 TACC3;ERIC-1s Transforming acidic coiled-coil-containing protein 3 1 NTENCDFLFS(0.995)PPEVT(0.005)GR 123.42 0.0013504 4598200 10132 12594 11133 12716 15359 9353.8 14079 6335.5 8531.2 6179.1 TRUE FALSE 10907.71371 11968.60027 11504.16866 11677.06212 14755.92849 9709.765414 12230.41039 7163.571603 9273.228355 5977.476473 1.82480245 2.002283125 1.924586189 1.953510344 2.4685883 1.624392075 2.046082564 1.198427402 1.551361749 1 12.54532083 -7.897670989 1.168764159 1.123716556 2.009444196 0.615806006 0.2530149 0.305398863 0.752252731 0.213884887 0.078194133 1.27E-08 7.897670989 0.88572764 NTETSKS(ph)PEKDVPMVEK ddPTM_A459_MK2206_30min_R1 1 NTETSKSPEKDVPMVEK 17 2 A0A2R8Y611;O14617-3;O14617-2;O14617;O14617-5 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 NT(0.001)ET(0.011)S(0.046)KS(0.942)PEKDVPMVEK 70.917 0.034917 90908000 4506.5 5893.6 6271.8 5458.7 2658.2 2403.1 3502.8 3935.3 5839.9 4974.5 TRUE FALSE 4123.19851 5509.925569 5846.08769 5879.13002 2552.318265 2539.161445 3269.134603 3900.894087 6446.978503 5590.778616 0.737499871 0.985538142 1.045666103 1.051576252 0.456522864 0.454169557 0.584736908 0.697737177 1.153145017 1 12.4488335 -6.241126168 24.94977712 0.688778892 0.963717535 0.193781246 0.223264241 1190.57347 1462326.193 0.06871094 0.088594728 5.74E-07 6.241126168 0.274938643 NTETSKS(ph)PEKDVPMVEK ddPTM_A459_MK2206_30min_R2 1 NTETSKSPEKDVPMVEK 17 2 A0A2R8Y611;O14617-3;O14617-2;O14617;O14617-5 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 NT(0.028)ET(0.24)S(0.168)KS(0.564)PEKDVPMVEK 69.72 0.038017 19242000 49927 43644 47670 28642 32102 18657 49079 30626 22476 45428 TRUE FALSE 53749.44951 41476.70242 49259.29401 26301.85698 30841.51418 19367.00521 42634.86835 34628.92335 24430.92185 43945.68808 1.223088131 0.94381734 1.120913021 0.598508253 0.701809791 0.440703196 0.970171824 0.787993655 0.555934448 1 15.423434 -5.754538083 24.97099373 0.711085075 1.080727379 0.487280229 0.175235925 134.1372352 485343.5305 0.046848368 0.078912784 1.76E-06 5.754538083 0.369642303 NTFTAWS(ph)DEESDYEIDDR ddPTM_A459_MK2206_30min_R1 1 NTFTAWSDEESDYEIDDR 18 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 NTFTAWS(1)DEESDYEIDDR 286.69 9.86E-69 5288400 1134.5 1263 1040.1 719.81 937.41 761.41 1199.2 853.57 1073.8 1601.9 TRUE FALSE 1038.004818 1180.77847 969.5009099 775.2498909 900.0709747 804.5203762 1119.203556 846.1073275 1185.425353 1800.355466 0.576555484 0.65585852 0.538505272 0.430609347 0.499940702 0.446867517 0.621656988 0.469966817 0.658439611 1 10.81406607 -8.639430048 3.623674833 0.999923156 0.531114663 0.807262196 0.069327034 0.242674601 6.552067567 0.070665617 0.018590851 2.29E-09 8.639430048 -0.468808493 NTFTAWS(ph)DEESDYEIDDRDVNK ddPTM_A459_MK2206_30min_R1 2 NTFTAWSDEESDYEIDDRDVNK 22 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 NT(0.001)FT(0.084)AWS(0.913)DEES(0.002)DYEIDDRDVNK;NT(0.001)FT(0.008)AWS(0.99)DEESDYEIDDRDVNK 144.43 8.40E-07 40046000 5355.6 6232.4 6538 5475.9 4806.9 4831.4 4524.8 5614.9 4629.2 3958.6 TRUE FALSE 4900.078097 5826.669627 6094.218776 5897.654767 4615.430994 5104.949693 4222.958848 5565.809521 5110.421906 4449.021254 1.101383387 1.30965201 1.369788641 1.325607236 1.037403674 1.147432076 0.949188284 1.251018865 1.148662057 1 12.11927228 -6.257723264 24.99878795 1.097437703 1.285623896 0.439103773 0.103436417 317.9632619 2138978.134 0.031350446 0.03893837 5.52E-07 6.257723264 0.188186193 NTFTAWS(ph)DEESDYEIDDRDVNK ddPTM_A459_MK2206_30min_R2 4 NTFTAWSDEESDYEIDDRDVNK 22 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 NT(0.003)FT(0.105)AWS(0.892)DEESDYEIDDRDVNK;NT(0.003)FT(0.063)AWS(0.928)DEES(0.005)DY(0.001)EIDDRDVNK;NT(0.001)FT(0.039)AWS(0.939)DEES(0.017)DY(0.004)EIDDRDVNK;NT(0.001)FT(0.053)AWS(0.878)DEES(0.068)DYEIDDRDVNK 97.388 0.00010113 61438000 75274 92141 82312 84342 99176 76162 97488 74965 73594 90772 TRUE FALSE 81037.03532 87565.41193 85056.241 77450.9888 95281.85192 79060.39828 84687.7085 84763.18289 79995.07309 87810.11707 0.922866727 0.997213247 0.968638283 0.882028078 1.085089681 0.90035637 0.964441357 0.965300876 0.911000643 1 16.42209955 -5.475204957 0.001530938 1.915199836 2.00E-05 0.010968838 0.056407168 2584204.558 792.4151044 491399.5786 499917.9264 3.35E-06 5.475204957 -1.915179877 NTFTAWSDEES(ph)DYEIDDR ddPTM_A459_MK2206_30min_R1 1 NTFTAWSDEESDYEIDDR 18 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 NTFT(0.07)AWS(0.239)DEES(0.69)DYEIDDR 261.66 1.02E-42 4632400 500.42 523.84 685.92 391.68 441.04 527.84 641.87 380.69 605.06 806.11 TRUE FALSE 457.8566512 489.7379208 639.3616615 421.8472615 423.4724429 557.7258446 599.0520235 377.3616675 667.9581522 905.9769926 0.505373376 0.540563309 0.705715119 0.465626903 0.467420747 0.615607073 0.661222115 0.416524559 0.737279376 1 9.823330603 -8.551256747 5.394069304 0.999904534 0.553698549 0.726165566 0.08669392 0.097112515 12.39893141 0.083332602 0.021638954 2.81E-09 8.551256747 -0.446205985 NTFTAWSDEES(ph)DYEIDDRDVNK ddPTM_A459_MK2206_30min_R1 1 NTFTAWSDEESDYEIDDRDVNK 22 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 NT(0.001)FT(0.015)AWS(0.217)DEES(0.549)DY(0.218)EIDDRDVNK 81.974 0.00053635 5543700 682.78 878.7 694.06 566.51 637.18 699.58 709.48 609.68 515.67 405.04 TRUE FALSE 624.7059756 821.4964703 646.949141 610.1426984 611.7997713 739.189615 662.1518837 604.349632 569.2757418 455.2194131 1.372318398 1.804616514 1.421180913 1.340326622 1.343966786 1.623809516 1.454577429 1.327600745 1.250552427 1 8.830418273 -8.446886082 1.061662157 1.003366146 1.489295103 0.553625892 0.135596024 0.40159203 0.99063811 0.13333789 0.043830294 3.57E-09 8.446886082 0.485928957 NTGIICT(ph)IGPASR ddPTM_A459_MK2206_30min_R2 1 NTGIICTIGPASR 13 0 P14618;B4DNK4;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 NT(0.02)GIICT(0.979)IGPAS(0.001)R 97.2 0.031718 7942300 30298 33225 31349 37740 37791 38617 59272 58500 41779 62453 TRUE FALSE 32617.63818 31575.09481 32394.16001 34656.52128 36307.13546 40086.597 51489.5152 66146.15086 45412.8619 60415.16372 0.53989158 0.52263526 0.536192539 0.57363945 0.60096064 0.663518801 0.852261453 1.094860078 0.751679861 1 15.88262308 -7.183529517 1.935127893 0.949263525 0.550556566 0.819727053 0.082871622 0.132134105 0.969680509 0.03905319 0.026250698 6.55E-08 7.183529517 -0.398706959 NTGIICTIGPAS(ph)R ddPTM_A459_MK2206_30min_R2 4 NTGIICTIGPASR 13 0 P14618;B4DNK4;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 NTGIICTIGPAS(1)R;NTGIICTIGPAS(1)R;NTGIICTIGPAS(1)R;NTGIICTIGPAS(1)R 140.49 0.00087917 61400000 156602 207368 160309 174826 154205 150267 224862 160007 110710 172930 TRUE FALSE 168591.5695 197070.4067 165653.622 160542.1566 148150.1369 155985.516 195337.3493 180920.4643 120339.3557 167287.3083 1.007796534 1.178035613 0.990234249 0.959679238 0.885602969 0.932440827 1.167675847 1.081495459 0.719357356 1 17.35196847 -5.425614886 7.61216934 0.971366198 1.092373358 0.155680511 0.117688045 0.533561874 36.90748318 0.031492971 0.065835001 3.75E-06 5.425614886 0.12100716 NTGIICTIGPASR ddPTM_A459_MK2206_30min_R1 2 NTGIICTIGPASR 13 0 P14618;B4DNK4;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 161.25 0.0050378 31477000 2107.23 2556.7 2725.2 2392.3 2162.36 2012.97 1840.92 2025.57 2365.1 1828.6 FALSE TRUE 1927.999023 2390.258365 2540.221017 2576.555361 2076.228622 2126.942622 1718.115586 2007.860655 2610.960609 2055.140773 0.938134773 1.163063084 1.236032611 1.253712346 1.010261024 1.034937679 0.83600871 0.976994219 1.270453413 1 11.0050215 -6.292878593 22.75986368 1.011695207 1.155137424 0.186884076 0.127717963 357.296625 258657.0404 0.041172158 0.046693047 5.09E-07 6.292878593 0.143442217 NTGIICTIGPASR ddPTM_A459_MK2206_30min_R2 1 NTGIICTIGPASR 13 0 P14618;B4DNK4;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 131.32 0.021271 7715700 16348 17155 14363 15585 16529 15865 24783 16420 18838 17289 FALSE TRUE 17599.61545 16303.10765 14841.85525 14311.65565 15879.98841 16468.75369 21528.96233 18566.15038 20476.49519 16724.86135 1.052302622 0.974782828 0.887412753 0.855711468 0.949484009 0.984687009 1.287243098 1.110092933 1.224314795 1 14.02970663 -7.100219394 5.985978351 1.163768594 0.94026151 0.582994367 0.085174072 0.158681518 7.877764116 0.032326949 0.025036333 7.94E-08 7.100219394 -0.223507084 NTGNGTQSSMGS(ph)PLTRPTPR ddPTM_A459_MK2206_30min_R2 1 NTGNGTQSSMGSPLTRPTPR 20 1 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4I5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 NTGNGT(0.028)QS(0.192)S(0.147)MGS(0.391)PLT(0.192)RPT(0.05)PR 52.059 0.033913 11664000 11085 9452.9 12181 12345 10449 8665.5 8819.3 3197.8 10822 6843.1 TRUE FALSE 11933.67612 8983.482732 12587.10846 11336.37401 10038.71976 8995.271675 7661.315316 3615.76344 11763.278 6619.810207 1.802721792 1.357060467 1.901430414 1.7124923 1.516466401 1.358841325 1.157331566 0.54620349 1.776981157 1 12.69257414 -6.894009135 1.878614536 1.085440991 1.67661406 0.406584456 0.309734374 0.32915871 2.376189385 0.129132289 0.107390879 1.28E-07 6.894009135 0.591173069 NTGNGTQSSMGSPLT(ph)RPTPR ddPTM_A459_MK2206_30min_R1 2 NTGNGTQSSMGSPLTRPTPR 20 1 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4I5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 NT(0.003)GNGT(0.001)QS(0.003)S(0.008)MGS(0.393)PLT(0.576)RPT(0.016)PR;NTGNGTQS(0.001)S(0.002)MGS(0.037)PLT(0.631)RPT(0.33)PR 73.781 0.0096945 12769000 2547.7 1957.88 2496 2710.7 1742.1 2212.01 2122.4 2492.2 2007.89 1521.47 TRUE FALSE 2331.004736 1830.421656 2326.578474 2919.478584 1672.708468 2337.252095 1980.818569 2470.410958 2216.617351 1709.96119 1.363191603 1.070446316 1.360603087 1.707336167 0.978214288 1.366845112 1.158399723 1.44471756 1.296296877 1 10.73974787 NTGNGTQSSMGSPLTRPT(ph)PR ddPTM_A459_MK2206_30min_R2 1 NTGNGTQSSMGSPLTRPTPR 20 1 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4I5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 NTGNGTQS(0.001)S(0.001)MGS(0.278)PLT(0.135)RPT(0.585)PR 71.637 0.013201 12454000 10297 9761.3 7871.4 8584.9 7858.1 8970.1 11492 9229.7 9313.2 6552.3 TRUE FALSE 11085.34624 9276.568036 8133.828547 7883.486208 7549.55151 9311.463441 9983.086596 10436.05348 10123.2453 6338.498988 1.748891379 1.463527572 1.283242068 1.243746544 1.191062983 1.469032883 1.574992221 1.64645502 1.597104507 1 12.62992552 -6.985133701 24.84764749 1.510438284 1.372101176 0 0.223204248 626.411371 1046984.443 0.079113402 0.069745756 1.03E-07 6.985133701 -0.138337107 NTGVSPASRPSPGTPT(ph)SPSNLTSGLK ddPTM_A459_MK2206_30min_R2 1 NTGVSPASRPSPGTPTSPSNLTSGLK 26 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 NTGVSPAS(0.001)RPS(0.004)PGT(0.045)PT(0.872)S(0.07)PS(0.007)NLT(0.001)SGLK 85.777 0.00011946 48306000 31101 53266 54239 48503 46762 43099 52586 43206 45565 53986 TRUE FALSE 33482.11647 50620.8879 56047.30119 44540.14975 44925.88892 44739.16265 45681.39503 48853.17255 49528.16134 52224.44124 0.641119669 0.969294964 1.073200591 0.852860245 0.860246426 0.856670968 0.874712949 0.935446534 0.948371302 1 15.67243753 -11.88787378 0.015738376 1.985999257 6.30E-07 0.152353995 0.10157559 8028.917426 15.89291047 1154.433628 867.5088755 1.29E-12 11.88787378 -1.985998627 NTGVSPASRPSPGTPTS(ph)PSNLTSGLK ddPTM_A459_MK2206_30min_R1 2 NTGVSPASRPSPGTPTSPSNLTSGLK 26 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 NTGVSPASRPSPGTPT(0.037)S(0.743)PS(0.2)NLT(0.015)S(0.004)GLK;NTGVSPASRPS(0.001)PGTPT(0.163)S(0.782)PS(0.049)NLT(0.005)S(0.001)GLK 106.99 1.70E-08 138218000 4711.4 5241.6 4432.4 4896.8 4108.6 3498 4119.3 4741 4687.1 3738 TRUE FALSE 4310.670689 4900.370887 4131.541037 5273.952384 3944.945762 3696.053737 3844.509013 4699.549937 5174.340818 4201.09166 1.026083465 1.16645179 0.983444631 1.255376652 0.939028729 0.879784122 0.915121431 1.118649703 1.231665776 1 12.03654855 -4.416093238 15.03459509 1.051544001 0.000298488 0.004041031 0.126398239 2280325.707 3171450.509 0.033053569 80178357.42 3.84E-05 4.416093238 -1.051245513 NTLDSEVPAAYQT(ph)PK ddPTM_A459_MK2206_30min_R1 2 NTLDSEVPAAYQTPK 15 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 NTLDSEVPAAYQT(1)PK;NTLDSEVPAAYQT(1)PK 147.53 0.0007534 10452000 6524.9 7100.1 6837.5 4768 5835.9 5319.5 5636.6 5676.4 6323.3 5933.9 TRUE FALSE 5969.922991 6637.882199 6373.38955 5135.232186 5603.443745 5620.685493 5260.592699 5626.771833 6980.629663 6669.036331 0.895170261 0.995328541 0.95566874 0.770011128 0.840217907 0.84280325 0.788808523 0.843715877 1.046722392 1 12.70326259 -8.26126022 24.99996635 1.023361212 0.866267023 0.474727658 0.066014476 15.3372356 2141012.9 0.058324577 0.018837922 5.48E-09 8.26126022 -0.157094189 NTLDSEVPAAYQT(ph)PK ddPTM_A459_MK2206_30min_R2 1 NTLDSEVPAAYQTPK 15 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 NTLDSEVPAAYQT(1)PK 183.88 4.91E-05 9021500 71303 61793 63799 58077 66418 45989 64483 57495 45277 77496 TRUE FALSE 76762.0125 58724.44948 65926.02682 53331.92332 63810.0956 47739.14362 56016.30464 65009.79391 49215.11162 74967.31187 1.023939776 0.783334069 0.879396969 0.71140237 0.851172251 0.636799459 0.747209727 0.867175203 0.656487613 1 16.19397405 -2.199425235 1.254154758 0.777392309 199.7102913 0.284156332 0.106775268 1423.329766 3.689163404 0.028873959 812940.1598 0.006317929 2.199425235 198.932899 NTLQLHR ddPTM_A459_MK2206_30min_R1 1 NTLQLHR 7 0 P61313;E7ERA2 P61313 RPL15 60S ribosomal protein L15;Ribosomal protein L15 0 121.62 0.012035 9156400 8427 9220.3 9552.6 8194.3 8093.5 7015.1 8005.3 9306.1 7827.9 7608.4 FALSE TRUE 7710.239398 8620.056794 8904.196127 8825.426406 7771.118757 7412.2889 7471.281043 9224.737749 8641.638217 8550.986032 0.901678399 1.00807752 1.041306358 1.032094588 0.908797971 0.866834406 0.873733277 1.078792284 1.010601372 1 13.06187507 -7.776429598 24.99943021 1.033522606 0.952103003 0.264509194 0.062464446 394.7926241 658392.5854 0.038463435 0.018596567 1.67E-08 7.776429598 -0.081419603 NTLQLHR ddPTM_A459_MK2206_30min_R2 4 NTLQLHR 7 0 P61313;E7ERA2 P61313 RPL15 60S ribosomal protein L15;Ribosomal protein L15 0 ;;; 133.6 0.0044665 22263800 245179 288673 257615 272529 289744 254541 311229 223933 226638 299614 FALSE TRUE 263950.0928 274337.9186 266203.7555 250262.5089 278367.1947 264227.7361 270364.2584 253201.812 246350.5636 289837.6197 0.910682654 0.946522811 0.918458259 0.863457646 0.960424651 0.911640581 0.932812858 0.873598852 0.849960622 1 18.14488534 -7.745408026 24.97435553 0.896334789 0.920480858 0 0.043897181 710.5958446 1107001.211 0.019825743 0.011398921 1.80E-08 7.745408026 0.024146068 NTPASAS(ph)LEGLAQTAGR ddPTM_A459_MK2206_30min_R2 1 NTPASASLEGLAQTAGR 17 0 F2Z329;A0A087WWU1;Q96Q45-2;Q96Q45;Q96Q45-5;Q96Q45-3 F2Z329 TMEM237 Transmembrane protein 237 1 NTPAS(0.371)AS(0.629)LEGLAQTAGR 86.179 0.027833 0 10929 11596 11008 14978 10485 18809 16417 10438 13801 14548 TRUE FALSE 11765.73264 11020.1595 11375.00123 13754.24949 10073.30622 19524.78968 14261.42818 11802.28244 15001.38603 14073.29995 0.836032251 0.783054404 0.808268229 0.977329378 0.715774285 1.387363997 1.013367741 0.838629353 1.065946586 1 13.78067304 NTPS(ph)PDVTLGTNPGTEDIQFPIQK ddPTM_A459_MK2206_30min_R2 1 NTPSPDVTLGTNPGTEDIQFPIQK 24 0 M0R3F6;M0R2Z9;Q8IX01-4;Q8IX01-3;Q8IX01 M0R3F6 SUGP2 SURP and G-patch domain-containing protein 2 1 NT(0.269)PS(0.682)PDVT(0.049)LGT(0.001)NPGTEDIQFPIQK 93.406 1.52E-05 2338300 41454 44767 45916 43218 44488 40453 49162 35591 37854 43368 TRUE FALSE 44627.75011 42543.93588 47446.81652 39686.95115 42741.17759 41992.46726 42706.97035 40242.8659 41146.4725 41952.90571 1.063758263 1.014087944 1.130954238 0.945988138 1.018789446 1.000942999 1.017974074 0.959239062 0.980777655 1 15.35648312 -5.77242319 24.99934971 0.990336659 1.064048941 0.534172067 0.034317652 167.7044967 381698.4438 0.009408594 0.01410634 1.69E-06 5.77242319 0.073712281 NTPSQHSHSIQHS(ph)PER ddPTM_A459_MK2206_30min_R1 6 NTPSQHSHSIQHSPER 16 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 NTPSQHSHS(0.016)IQHS(0.984)PER;NTPSQHSHS(0.003)IQHS(0.997)PER;NTPSQHS(0.029)HS(0.001)IQHS(0.97)PER;NTPSQHSHS(0.001)IQHS(0.999)PER;NTPSQHSHS(0.128)IQHS(0.872)PER;NTPSQHSHSIQHS(1)PER 142.27 0.00020579 31437320 8893.96 3980.29 5649.31 4385.12 12755.07 11817.99 10289 8629.28 4066.54 3373.62 TRUE FALSE 8137.481998 3721.172398 5265.850577 4722.862702 12247.00855 12487.11438 9602.639583 8553.835115 4489.271385 3791.569515 2.146204089 0.981433252 1.388831342 1.245622079 3.23006304 3.293389276 2.532629178 2.256014318 1.184013999 1 11.88857946 -3.414882247 16.5140029 1.991712694 1.676419369 0 0.847988208 0 0 0.211172578 0 0.000384696 3.414882247 -0.315293325 NTPSQHSHSIQHS(ph)PER ddPTM_A459_MK2206_30min_R2 10 NTPSQHSHSIQHSPER 16 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 NTPSQHSHS(0.001)IQHS(0.999)PER;NTPSQHS(0.07)HS(0.375)IQHS(0.555)PER;NTPSQHSHS(0.001)IQHS(0.999)PER;NTPSQHS(0.016)HS(0.099)IQHS(0.885)PER;NTPSQHSHS(0.003)IQHS(0.997)PER;NTPSQHS(0.002)HS(0.011)IQHS(0.987)PER;NTPSQHSHS(0.002)IQHS(0.998)PER;NTPSQHSHS(0.003)IQHS(0.997)PER;NTPSQHS(0.006)HS(0.025)IQHS(0.969)PER;NTPSQHSHS(0.005)IQHS(0.995)PER 120.32 0.00084113 156135800 5811.19 23372.82 15983.32 40097.49 41550.8 55105.03 31839.41 26725.89 44419.46 44633.12 TRUE FALSE 6256.099174 22212.15975 16516.19591 36821.3968 39919.30682 57202.09053 27658.85722 30219.05559 48282.98434 43176.74495 0.144895109 0.514447297 0.382525267 0.852806223 0.924555727 1.32483564 0.640596165 0.699891935 1.118263649 1 15.39796686 -5.786570219 3.239380746 0.937709171 0.347928333 0.647786522 0.200353278 0.1619921 3.505353922 0.059806165 0.101235534 1.63E-06 5.786570219 -0.589780838 NTS(ph)ASDEDER ddPTM_A459_MK2206_30min_R2 2 NTSASDEDER 10 0 Q32MZ4-2;Q32MZ4;C9JTC6;Q32MZ4-4 Q32MZ4-2;Q32MZ4-4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NT(0.027)S(0.646)AS(0.327)DEDER;NT(0.01)S(0.94)AS(0.05)DEDER 124.48 0.0038268 11116200 9256.7 6601.1 6760.9 9427.1 8124.8 6841.7 8153.5 10107 7291.7 8640.7 TRUE FALSE 9965.400069 6273.298973 6986.305032 8656.875774 7805.779528 7102.065688 7082.935656 11428.0196 7925.918886 8358.754667 1.192211097 0.750506412 0.835806925 1.035665732 0.933844794 0.849655956 0.847367334 1.367191652 0.948217671 1 13.0290723 -7.711614881 24.99993513 1.118283974 0.913101996 0.22778079 0.154590272 133.2976588 66883.15448 0.069255171 0.0399844 1.94E-08 7.711614881 -0.205181978 NTSGLPAEPESVS(ph)SPPTLHMK ddPTM_A459_MK2206_30min_R2 1 NTSGLPAEPESVSSPPTLHMK 21 0 Q8IWI9;Q8IWI9-3 Q8IWI9 MGA MAX gene-associated protein 1 NTSGLPAEPESVS(0.497)S(0.497)PPT(0.006)LHMK 88.709 0.001614 3261000 10928 16732 11886 17148 13921 15536 16941 14201 11695 14221 TRUE FALSE 11764.65608 15901.11321 12282.27331 15746.95355 13374.39159 16127.23337 14716.62635 16057.11946 12712.20996 13756.96993 0.855177858 1.155858687 0.892803674 1.144652756 0.972190217 1.172295458 1.069757833 1.167198848 0.924055953 1 13.74787512 -5.77035114 24.99993637 1.072162302 0.986737924 0.134189556 0.107791515 387.782278 1087836.919 0.028185109 0.04251298 1.70E-06 5.77035114 -0.085424377 NTSGLPAEPESVSS(ph)PPTLHMK ddPTM_A459_MK2206_30min_R1 2 NTSGLPAEPESVSSPPTLHMK 21 0 Q8IWI9;Q8IWI9-3 Q8IWI9 MGA MAX gene-associated protein 1 NTSGLPAEPES(0.002)VS(0.253)S(0.74)PPT(0.005)LHMK;NTSGLPAEPESVS(0.045)S(0.942)PPT(0.013)LHMK 148.89 1.54E-06 32599000 7412.9 8005.7 6635.8 6549.2 7386.4 7110.7 5879.3 5565.9 6027.2 3927.6 TRUE FALSE 6782.393928 7484.527475 6185.380384 7053.620519 7092.184047 7513.301689 5487.102624 5517.237923 6653.749009 4414.18074 1.536501183 1.695564345 1.40125218 1.597945561 1.606681843 1.70208293 1.243062518 1.249889447 1.507357628 1 12.10792999 -8.710893354 0.385449413 0.962583338 1.612951698 0.59009003 0.138599936 1.256675794 0.449749009 0.270196703 0.121838837 1.95E-09 8.710893354 0.65036836 NTSGLPAEPESVSS(ph)PPTLHMK ddPTM_A459_MK2206_30min_R2 4 NTSGLPAEPESVSSPPTLHMK 21 0 Q8IWI9;Q8IWI9-3 Q8IWI9 MGA MAX gene-associated protein 1 NTSGLPAEPESVS(0.048)S(0.952)PPTLHMK;NTSGLPAEPES(0.001)VS(0.26)S(0.739)PPT(0.001)LHMK;NTSGLPAEPES(0.01)VS(0.234)S(0.716)PPT(0.04)LHMK;NTSGLPAEPESVS(0.209)S(0.791)PPTLHMK 130.15 3.56E-05 36601800 105884 136708 126836 147526 141784 132973 151254 126501.9 108696.6 133189 TRUE FALSE 113990.5605 129919.2795 131064.6489 135472.6539 136216.8478 138033.3807 131394.1681 143036.1327 118150.8338 128843.0538 0.884724143 1.008352997 1.017242645 1.05145485 1.057230822 1.071329626 1.019800169 1.110157889 0.917013609 1 16.97525524 -4.452773329 1.587319693 1.038103489 0.684667481 0.438772158 0.048662977 2.241194211 2.755594109 0.012633802 1.582852906 3.53E-05 4.452773329 -0.353436008 NTSLPPLWS(ph)PEAER ddPTM_A459_MK2206_30min_R1 4 NTSLPPLWSPEAER 14 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER;NT(0.002)S(0.002)LPPLWS(0.996)PEAER 205.98 7.94E-06 157929000 29460.3 29397.1 31474 26384.6 27348.9 24182.7 27549.2 26557.2 25318.7 23761.4 TRUE FALSE 26954.54678 27483.34345 29337.63257 28416.74646 26259.5354 25551.90358 25711.44313 26325.0132 27950.66947 26705.14162 1.009339219 1.029140524 1.098576184 1.064092708 0.983313842 0.95681588 0.962789994 0.985765722 1.046640002 1 14.70482991 -6.266527324 24.79138216 0.985567393 1.052225902 0.470873691 0.0315438 341.7055241 1664983.528 0.010425655 0.012156868 5.41E-07 6.266527324 0.066658509 NTSLPPLWS(ph)PEAER ddPTM_A459_MK2206_30min_R2 4 NTSLPPLWSPEAER 14 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER;NT(0.006)S(0.006)LPPLWS(0.988)PEAER;NTSLPPLWS(1)PEAER 171.87 0.00013306 63102600 124535 122349 115843 131055 132949 111501 123480 105416 98818 121105 TRUE FALSE 134069.4954 116273.3266 119705.1478 120347.3873 127728.7542 115744.2487 107266.9277 119194.2331 107413.011 117153.3538 1.144393148 0.992488246 1.021781656 1.027263697 1.09026972 0.987972132 0.915611241 1.01742058 0.916858183 1 16.83803873 -6.94192482 6.794735587 0.962210208 1.047952304 0.44773506 0.048987546 0.20413422 18.82614779 0.016719668 0.014692883 1.14E-07 6.94192482 0.085742096 NTVDLVTTCHIHSSS(ph)DDEIDFK ddPTM_A459_MK2206_30min_R2 1 NTVDLVTTCHIHSSSDDEIDFK 22 0 E9PQP7;Q5H9R7-2;Q5H9R7;Q5H9R7-5;H0YDW1 E9PQP7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 NTVDLVT(0.001)T(0.001)CHIHS(0.152)S(0.152)S(0.695)DDEIDFK 75.057 0.0080668 0 10505 12914 10942 12672 12073 10493 13060 13926 12727 13157 TRUE FALSE 11309.27088 12272.70954 11306.80082 11636.65706 11598.95336 10892.31847 11345.20631 15746.17602 13833.97145 12727.68817 0.888556565 0.964252846 0.888362495 0.914278926 0.911316588 0.855797088 0.891379971 1.237159161 1.086919421 1 13.63568277 -7.743442033 24.99958474 1.121529461 0.90291693 0.710653817 0.060058891 108.3927145 150565.5258 0.026832112 0.015450762 1.81E-08 7.743442033 -0.218612531 NVAEALGHS(ph)PK ddPTM_A459_MK2206_30min_R1 1 NVAEALGHSPK 11 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 NVAEALGHS(1)PK 109.99 0.0090784 7623200 2109 2556 2188.9 1871 1499.5 1481 1821.6 1552.7 2608.8 3325.2 TRUE FALSE 1929.618475 2389.603935 2040.323567 2015.104744 1439.77174 1564.85294 1700.084388 1539.124908 2879.994096 3737.15088 0.51633411 0.639418641 0.545956969 0.539208828 0.385259195 0.418728863 0.454914571 0.411844466 0.770638968 1 11.8677231 -8.490066747 3.541003084 0.998021186 0.491621803 0.837289358 0.073234312 0.084691249 2.48038446 0.080316151 0.021204766 3.24E-09 8.490066747 -0.506399383 NVAEALGHS(ph)PKDPGGGGGPVR ddPTM_A459_MK2206_30min_R1 2 NVAEALGHSPKDPGGGGGPVR 21 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 NVAEALGHS(1)PKDPGGGGGPVR;NVAEALGHS(1)PKDPGGGGGPVR 69.771 0.003682 37248000 8119.7 8769 8669.7 7630.8 7216.5 5465.7 6733.9 6748.1 6434.4 5738.5 TRUE FALSE 7429.076877 8198.136506 8081.224919 8218.525538 6929.051524 5775.163211 6284.693818 6689.102073 7103.278906 6449.428703 1.151896892 1.271141505 1.253014072 1.274302875 1.074366714 0.895453454 0.974457445 1.037161954 1.101381104 1 12.65495566 -6.403109855 4.23058027 1.00073417 1.240115951 0.784110239 0.058381204 0.108847884 3.240860396 0.019701697 0.022331153 3.95E-07 6.403109855 0.239381781 NVAEALGHS(ph)PKDPGGGGGPVR ddPTM_A459_MK2206_30min_R2 2 NVAEALGHSPKDPGGGGGPVR 21 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 NVAEALGHS(1)PKDPGGGGGPVR;NVAEALGHS(1)PKDPGGGGGPVR 74.876 0.0013448 67008000 81253 100500 94001 100937 96040 79919 105330 86948 77973 93065 TRUE FALSE 87473.79215 95509.31614 97134.94642 92690.12422 92268.98704 82960.37355 91500.04448 98312.40214 84754.9506 90028.29667 0.971625538 1.060881075 1.078937956 1.029566566 1.024888734 0.921492204 1.016347614 1.092016686 0.941425682 1 16.4580909 -6.534436396 24.99801876 0.998255105 1.038581748 0.130712328 0.049933991 498.949778 1079169 0.016830995 0.016842209 2.92E-07 6.534436396 0.040326643 NVALLSQLYHS(ph)PAR ddPTM_A459_MK2206_30min_R1 3 NVALLSQLYHSPAR 14 0 Q15717;Q15717-2 Q15717 ELAVL1 ELAV-like protein 1 1 NVALLSQLYHS(1)PAR;NVALLSQLYHS(1)PAR;NVALLSQLYHS(1)PAR 199.31 4.71E-05 109454000 16417.3 12794.1 12739.8 10731.9 13837 13219.1 14404.1 11664.3 12210.9 12855 TRUE FALSE 15020.92242 11961.20176 11875.05787 11558.4728 13285.84299 13967.55402 13443.22877 11562.32025 13480.26675 14447.57445 1.039684722 0.827903798 0.821941282 0.800028603 0.919589862 0.966775016 0.93048344 0.800294907 0.933047052 1 13.81853968 NVALLSQLYHS(ph)PAR ddPTM_A459_MK2206_30min_R2 2 NVALLSQLYHSPAR 14 0 Q15717;Q15717-2 Q15717 ELAVL1 ELAV-like protein 1 1 NVALLSQLYHS(1)PAR;NVALLSQLYHS(1)PAR 173.49 6.83E-05 70704000 208333 217769 203486 211180 229113 200152 199055 168799 140163 182623 TRUE FALSE 224283.1347 206954.9081 210270.1217 193925.9185 220116.8724 207768.9246 172918.8394 190861.6089 152354.1244 176664.0265 1.26954615 1.171460383 1.190226023 1.097710283 1.245963181 1.176068092 0.978800511 1.080364875 0.862394724 1 17.43064877 -7.244040309 6.056863485 0.98653078 1.189693281 0.714034889 0.065514847 0.09371311 13.9796808 0.025162398 0.018614589 5.70E-08 7.244040309 0.203162501 NVALLSQLYHS(ph)PARR ddPTM_A459_MK2206_30min_R1 1 NVALLSQLYHSPARR 15 1 Q15717;Q15717-2 Q15717 ELAVL1 ELAV-like protein 1 1 NVALLSQLY(0.001)HS(0.999)PARR 70.114 0.027029 10773000 2713.9 2436.2 2768.3 2630.5 2659.2 2156.7 2221.5 2326 2005.5 1230.8 TRUE FALSE 2483.068554 2277.602937 2580.395509 2833.101566 2553.278433 2278.81049 2073.307788 2305.664027 2213.978902 1383.280796 1.79505749 1.646522487 1.865416997 2.048103013 1.845813547 1.647395451 1.498833638 1.666808383 1.600527462 1 10.43387833 -9.42752645 0.362529604 0.858952802 1.848858525 0.783892481 0.123962271 2.17433491 0.422610961 0.614242989 0.120091096 3.74E-10 9.42752645 0.989905723 NVDAAVS(ph)PR ddPTM_A459_MK2206_30min_R1 1 NVDAAVSPR 9 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 NVDAAVS(1)PR 86.463 0.033813 48673000 3218.8 3233 3518.1 3398.8 3120 2746.3 2738.7 3322 2782.8 2519.8 TRUE FALSE 2945.024157 3022.531112 3279.301174 3660.576165 2995.723793 2901.793133 2556.00632 3292.956104 3072.082018 2831.971848 1.039919998 1.067288545 1.157956841 1.292589179 1.05782259 1.024654654 0.902553577 1.162778545 1.084785508 1 11.46759121 -6.498178497 24.54610683 1.037340315 1.140557557 0.243976172 0.08753348 951.2390478 945304.0496 0.029118313 0.032847713 3.18E-07 6.498178497 0.103217242 NVDAAVS(ph)PR ddPTM_A459_MK2206_30min_R2 2 NVDAAVSPR 9 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 NVDAAVS(1)PR;NVDAAVS(1)PR 101.56 0.016919 116185000 538746 567905 414165 507940 612061 534268 564041 446222 516173 439399 TRUE FALSE 579992.808 539703.6635 427973.0544 466439.6772 588028.4098 554599.9431 489981.7392 504544.7475 561068.7945 425061.4466 1.364491681 1.269707398 1.006849851 1.097346468 1.383396247 1.304752401 1.152731548 1.186992496 1.319971028 1 18.69731189 -10.80379743 5.130783666 0.999953942 1.22530864 0.265933923 0.115083126 6.45E-05 9.04E-06 0.11854331 0.028745108 1.57E-11 10.80379743 0.225354698 NVDLLSDMVQEHDEPILK ddPTM_A459_MK2206_30min_R1 3 NVDLLSDMVQEHDEPILK 18 0 P55209;F8W020;P55209-2;P55209-3;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8VUX1;F8VXI6;F8W118;F8W543;H0YH88 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 0 ;; 146.67 0.00033547 26647600 12194.6 12350.1 12826 11791 11314.4 10596.1 11539.6 11424.2 10092.9 9535.5 FALSE TRUE 11157.38523 11546.10625 11955.40686 12699.14486 10863.72349 11196.04203 10769.81434 11324.31942 11142.09307 10716.82973 1.041108753 1.077380768 1.11557309 1.184972159 1.01370683 1.044715864 1.004944056 1.056685579 1.039681823 1 13.38759057 -6.310173515 24.99995487 1.029277377 1.103575757 0.507958293 0.0376127 348.9205974 178990.6309 0.012189943 0.013822139 4.90E-07 6.310173515 0.07429838 NVDLLSDMVQEHDEPILK ddPTM_A459_MK2206_30min_R2 2 NVDLLSDMVQEHDEPILK 18 0 P55209;F8W020;P55209-2;P55209-3;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8VUX1;F8VXI6;F8W118;F8W543;H0YH88 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 0 ; 212.35 1.05E-11 7995200 56333 62799 58534 68593 71323 57490 62597 54842 52156 63749 FALSE TRUE 60645.89779 59680.49298 60485.49435 62988.73248 68522.50065 59677.82224 54377.93871 62010.0377 56692.4346 61668.87535 0.983411769 0.967757116 0.980810725 1.021402322 1.111135889 0.967713809 0.881772829 1.005532164 0.919303851 1 15.91225492 -6.985685098 24.94949824 0.948203216 1.012118665 0.256355973 0.049880359 325.5952949 567479.2186 0.018136606 0.015988336 1.03E-07 6.985685098 0.063915449 NVFEVGPGDS(ph)PTFPR ddPTM_A459_MK2206_30min_R1 2 NVFEVGPGDSPTFPR 15 0 Q16584;Q16584-2 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 NVFEVGPGDS(0.976)PT(0.024)FPR;NVFEVGPGDS(0.997)PT(0.003)FPR 240.66 3.93E-20 22889000 4830.6 4610 4900.5 4433 4345.4 4626.2 5589.6 5514.6 4525.2 4783.6 TRUE FALSE 4419.732104 4309.888162 4567.867714 4774.430428 4172.313516 4888.131446 5216.727983 5466.386434 4995.610734 5376.228482 0.822087848 0.801656436 0.849641664 0.888063155 0.776067001 0.909211999 0.970332269 1.01676974 0.929203576 1 12.39237874 -7.039155322 3.313972115 0.979660422 0.830681929 0.802611427 0.035309414 0.107857284 2.403382047 0.013971065 0.011069542 9.14E-08 7.039155322 -0.148978494 NVFEVGPGDS(ph)PTFPR ddPTM_A459_MK2206_30min_R2 2 NVFEVGPGDSPTFPR 15 0 Q16584;Q16584-2 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 NVFEVGPGDS(0.968)PT(0.032)FPR;NVFEVGPGDS(0.768)PT(0.232)FPR 97.129 0.0097266 10136000 49799 55226 51398 65159 53129 60764 66048 40898 51347 58523 TRUE FALSE 53611.64973 52483.55715 53111.58367 59835.30127 51042.88851 63076.4166 57375.81826 46243.50902 55813.06925 56613.3993 0.946978107 0.92705186 0.938145109 1.05691059 0.901604375 1.114160559 1.013467111 0.816829754 0.98586324 1 15.78885593 -1.680143428 20.49444261 0.968644611 0.047330324 0 0.079326055 0 0 0.018274856 0 0.020886062 1.680143428 -0.921314288 NVFEVGPGDSPT(ph)FPR ddPTM_A459_MK2206_30min_R1 1 NVFEVGPGDSPTFPR 15 0 Q16584;Q16584-2 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 NVFEVGPGDS(0.054)PT(0.946)FPR 128.45 0.0022657 12339000 3431.7 3768.1 3721.5 3165.4 3738 3024 3605.7 3266.3 3824.6 4028.6 TRUE FALSE 3139.815894 3522.796005 3468.894949 3409.199656 3589.107545 3195.216267 3365.170332 3237.743083 4222.180856 4527.693382 0.693469197 0.778055338 0.766150588 0.752966106 0.792701104 0.70570509 0.743241657 0.715097691 0.932523583 1 12.14456055 -8.382220724 3.861128508 0.996088905 0.746088075 0.893497946 0.031077274 0.064741358 1.584453518 0.02957999 0.007832234 4.15E-09 8.382220724 -0.25000083 NVFTS(ph)AEELER ddPTM_A459_MK2206_30min_R1 1 NVFTSAEELER 11 0 B8ZZF5;C9J5M4;Q9H8M9 B8ZZF5 EVA1A Protein eva-1 homolog A 1 NVFT(0.327)S(0.673)AEELER 90.861 0.027231 2644200 1580.5 1190.3 941.41 886.39 1268.7 1445.2 1437.6 1590.7 1634.4 1408.2 TRUE FALSE 1446.070175 1112.811254 877.5097121 954.6599114 1218.164992 1527.025975 1341.700327 1576.792678 1804.301729 1582.658447 0.913696937 0.703127864 0.554452992 0.603200212 0.769695442 0.964848719 0.847751029 0.996293724 1.140044924 1 10.62813423 -6.986583077 1.202217149 1.031100814 0.684482928 0.623970617 0.109960818 0.325952635 0.967434286 0.067182131 0.049041984 1.03E-07 6.986583077 -0.346617885 NVFTS(ph)AEELER ddPTM_A459_MK2206_30min_R2 1 NVFTSAEELER 11 0 B8ZZF5;C9J5M4;Q9H8M9 B8ZZF5 EVA1A Protein eva-1 homolog A 1 NVFT(0.344)S(0.656)AEELER 121.56 0.0034049 0 15310 8759.7 8587.4 9112.8 7829.2 9980.2 20128 9122.8 14367 12544 TRUE FALSE 16482.14537 8324.706036 8873.69963 8368.25509 7521.786269 10360.0035 17485.16942 10315.18128 15616.61569 12134.69031 1.358266668 0.686025422 0.731267087 0.689614228 0.619858116 0.85375096 1.440924241 0.850057234 1.286939781 1 13.56684967 -7.02728728 24.02554442 1.134178405 0.791780505 0.293046441 0.243291095 548.6676462 483081.8241 0.090133777 0.07004394 9.39E-08 7.02728728 -0.3423979 NVGESVAAALS(ph)PLGIEVDIDVEHGGK ddPTM_A459_MK2206_30min_R1 2 NVGESVAAALSPLGIEVDIDVEHGGK 26 0 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 NVGESVAAALS(1)PLGIEVDIDVEHGGK;NVGESVAAALS(1)PLGIEVDIDVEHGGK 188.33 1.05E-27 29124700 5864.32 5967.95 6380.61 4100 4561.65 4418.72 5926.32 4630.12 6475.47 7576.23 TRUE FALSE 5365.528789 5579.43537 5947.511971 4415.78271 4379.949821 4668.904108 5530.986006 4589.639349 7148.618279 8514.83057 0.630139231 0.65526088 0.698488587 0.518599011 0.514390719 0.548326132 0.649570882 0.539017108 0.839549093 1 13.05576211 -8.458218298 3.410466877 0.997913989 0.595238365 0.828245046 0.061280366 0.08835786 2.095339652 0.064050523 0.016976364 3.48E-09 8.458218298 -0.402675625 NVGESVAAALS(ph)PLGIEVDIDVEHGGKR ddPTM_A459_MK2206_30min_R1 5 NVGESVAAALSPLGIEVDIDVEHGGKR 27 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 NVGESVAAALS(1)PLGIEVDIDVEHGGKR;NVGESVAAALS(1)PLGIEVDIDVEHGGKR;NVGESVAAALS(1)PLGIEVDIDVEHGGKR;NVGESVAAALS(1)PLGIEVDIDVEHGGKR;NVGESVAAALS(1)PLGIEVDIDVEHGGKR 188.51 2.56E-32 89165700 18102.2 20435.07 19984.71 18203.13 16986.88 15439.17 15364.15 16544.28 12737.17 8557.68 TRUE FALSE 16562.51283 19104.74323 18628.20357 19605.13823 16310.2566 16313.32246 14339.23559 16399.6351 14061.2444 9617.870006 1.722056216 1.986379855 1.936832537 2.038407487 1.695828348 1.696147115 1.490895134 1.70512131 1.461991521 1 13.23150171 -8.673092763 0.317480979 0.887992473 1.980982669 0.826045015 0.120625077 0.886383382 0.237257097 0.328908332 0.161513074 2.12E-09 8.673092763 1.092990196 NVGESVAAALSPLGIEVDIDVEHGGKR ddPTM_A459_MK2206_30min_R1 1 NVGESVAAALSPLGIEVDIDVEHGGKR 27 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 0 144.33 3.08E-13 1674000 1279.1 1313.8 1548.8 1039.5 1630.2 1280 1449.3 1093.2 815.83 776.22 FALSE TRUE 1170.305828 1228.271381 1443.671771 1119.56247 1565.265682 1352.472494 1352.619841 1083.642268 900.638448 872.3839938 1.341503096 1.407948094 1.654858161 1.283336785 1.794239341 1.550317869 1.550486771 1.242162024 1.032387635 1 9.76881949 -7.995731835 2.6049077 1.015780813 1.51757017 0.66894208 0.141023325 0.172570602 2.230976978 0.109577507 0.038719164 1.01E-08 7.995731835 0.501789357 NVHS(ph)EDFENR ddPTM_A459_MK2206_30min_R1 2 NVHSEDFENR 10 0 Q9H2P0;A0A669KBJ7 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 NVHS(1)EDFENR;NVHS(1)EDFENR 145.81 0.0008869 53436000 5115.8 4877.2 5181.3 4243.9 4535.2 4496.1 4873.1 4976 3979.6 3604.6 TRUE FALSE 4680.674346 4559.693394 4829.607792 4570.765913 4354.553381 4750.665297 4548.02439 4932.495357 4393.293661 4051.165061 1.15538969 1.125526441 1.192152805 1.12825961 1.074889153 1.172666437 1.122646034 1.217549836 1.084451903 1 11.98412115 -8.528648022 23.30338386 0.999999998 1.1464182 0.601005809 0.037905859 173.7334817 701750.1353 0.035712429 0.009220909 2.96E-09 8.528648022 0.146418202 NVHS(ph)EDFENR ddPTM_A459_MK2206_30min_R2 2 NVHSEDFENR 10 0 Q9H2P0;A0A669KBJ7 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 NVHS(1)EDFENR;NVHS(1)EDFENR 136.01 0.0012582 64379000 251500 291280 243727 300260 290130 295810 296810 255413 263200 283900 TRUE FALSE 270755.0334 276815.4588 251852.7365 275727.7975 278738.0384 307067.2568 257838.4905 288796.3561 286092.6602 274636.3663 0.985867375 1.007934465 0.91704074 1.003974096 1.01493492 1.118086658 0.938835938 1.051559049 1.04171441 1 18.06716315 -6.095522081 3.644168944 1.029951042 0.97261284 0.219285287 0.047441399 0.363338945 8.915285218 0.014155235 0.019200087 8.03E-07 6.095522081 -0.057338202 NVIPDTPPS(ph)TPLVPSR ddPTM_A459_MK2206_30min_R1 1 NVIPDTPPSTPLVPSR 16 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 NVIPDT(0.344)PPS(0.553)T(0.097)PLVPS(0.006)R 111.73 0.0025708 8574900 4863 4656.7 5037.9 3713.7 4836.9 4128.1 4543.4 4242.5 4415.2 4153 TRUE FALSE 4449.376313 4353.547984 4695.941384 3999.729817 4644.236031 4361.829455 4240.318076 4205.40827 4874.17584 4667.504994 0.953266535 0.932735581 1.006092418 0.856931021 0.995014689 0.934509864 0.908476388 0.900997059 1.044278656 1 12.18843585 -8.26695245 24.99346334 1.022139335 0.936594354 0.39836326 0.042337277 473.213329 2145274.182 0.035370757 0.010176204 5.41E-09 8.26695245 -0.085544982 NVLGHMQQGGAPSPFDR ddPTM_A459_MK2206_30min_R1 2 NVLGHMQQGGAPSPFDR 17 0 Q01813;Q01813-2;B1APP6;H0Y757 Q01813 PFKP "ATP-dependent 6-phosphofructokinase, platelet type" 0 ; 175.27 2.35E-06 13276000 3896.7 3673.8 4062.7 3769.9 3632.6 3200.3 3688.9 3955.1 3386.1 2996.6 FALSE TRUE 3565.265203 3434.634952 3786.935243 4060.258351 3487.90585 3381.49822 3442.820212 3920.520978 3738.097212 3367.841431 1.058620269 1.019832739 1.124439888 1.205596651 1.035650259 1.004055057 1.022263156 1.164104979 1.109938603 1 11.7176085 -10.91710446 5.940565671 0.999979179 1.08263081 0.131155442 0.063873337 1.91E-05 1.95E-06 0.067024554 0.016251748 1.21E-11 10.91710446 0.082651631 NVNS(ph)LKEDEELVK ddPTM_A459_MK2206_30min_R2 1 NVNSLKEDEELVK 13 1 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 NVNS(1)LKEDEELVK 67.416 0.038476 4399500 39661 11091 13990 7070 11351 7809.3 23922 10594 20159 21088 TRUE FALSE 42697.47665 10540.23707 14456.41962 6492.358384 10905.30271 8106.488384 20781.01266 11978.67217 21912.39338 20399.90029 2.093023792 0.516680813 0.708651484 0.318254418 0.534576275 0.397378824 1.018682071 0.587192683 1.074142181 1 14.31627448 -4.758027289 24.99984691 0.657231571 2.093025796 0.733553928 0.254308617 48.30362306 353857.1676 0.062225857 0.440998644 1.75E-05 4.758027289 1.435794225 NVPESSPHS(ph)PCEGLPSEAALTPRPEGK ddPTM_A459_MK2206_30min_R2 1 NVPESSPHSPCEGLPSEAALTPRPEGK 27 1 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2;H0YCW2;S4R3B3;H7C453;S4R3U7 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 NVPES(0.005)S(0.017)PHS(0.977)PCEGLPS(0.001)EAALTPRPEGK 72.654 0.00014768 9286400 15075 22484 27444 26676 25782 28864 25310 19582 23580 26004 TRUE FALSE 16229.15359 21367.47725 28358.96926 24496.48547 24769.66914 29962.43975 21986.7666 22141.43464 25630.94578 25155.49161 0.645153505 0.849416008 1.12734705 0.973802693 0.984662495 1.191089413 0.874034463 0.880182943 1.018900611 1 14.61858576 -4.92705482 3.443559093 1.001996902 0.64550994 0.596098314 0.092553781 0.18032044 3.940262085 0.024426883 0.137461392 1.18E-05 4.92705482 -0.356486962 NVPHEDICEDS(ph)DIDGDYR ddPTM_A459_MK2206_30min_R1 3 NVPHEDICEDSDIDGDYR 18 0 O00629 O00629 KPNA4 Importin subunit alpha-3 1 NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR 210.43 1.15E-11 28913800 7080.11 7161.96 6304.12 4781.3 6148.66 5554.11 6536.8 5437.84 5449.31 6404.51 TRUE FALSE 6477.909465 6695.715102 5876.213899 5149.556554 5903.745852 5868.578908 6100.741999 5390.297538 6015.785275 7197.94905 0.899966007 0.930225409 0.816373367 0.715419978 0.820198339 0.815312649 0.847566711 0.748865753 0.835763803 1 12.81337018 -5.269015872 21.61844804 0.812352302 0.915095721 0.187189497 0.071393655 106.3120671 303355.0052 0.017472167 0.037777137 5.38E-06 5.269015872 0.102743419 NVPHEDICEDS(ph)DIDGDYR ddPTM_A459_MK2206_30min_R2 6 NVPHEDICEDSDIDGDYR 18 0 O00629 O00629 KPNA4 Importin subunit alpha-3 1 NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR 136.59 0.00023158 201059600 312527 340142 298725 368145 319868 349494 366868 282311 262059 354665 TRUE FALSE 336454.3074 323251.0429 308684.3424 338066.3759 307308.3751 362794.2391 318697.7909 319210.017 284852.4181 343092.3101 0.980652429 0.942169304 0.899712215 0.985351073 0.895701728 1.057424572 0.928898088 0.930391057 0.830250081 1 18.38823726 -7.701568659 3.502004024 0.908681465 0.956925875 0.075803404 0.058233709 0.522634424 12.86645977 0.030530494 0.015505991 1.99E-08 7.701568659 0.04824441 NVPHEDICEDSDIDGDYR ddPTM_A459_MK2206_30min_R1 1 NVPHEDICEDSDIDGDYR 18 0 O00629 O00629 KPNA4 Importin subunit alpha-3 0 142.4 0.00042399 10855000 5320.6 5085 5258 4288.9 5699.3 4501.3 4984.3 4524.6 4478.4 4706.9 FALSE TRUE 4868.05503 4753.965576 4901.10161 4619.231821 5472.284813 4756.159716 4651.806441 4485.041899 4943.945706 5290.026307 0.920232669 0.898665772 0.926479629 0.87319638 1.034453232 0.899080541 0.879354122 0.847829791 0.934578662 1 12.36905918 NVPHEDICEDSDIDGDYR ddPTM_A459_MK2206_30min_R2 2 NVPHEDICEDSDIDGDYR 18 0 O00629 O00629 KPNA4 Importin subunit alpha-3 0 ; 221.34 2.51E-14 19967100 117146 157266 117674 141027 152658 145961 156556 117920 115291 133553 FALSE TRUE 126114.7878 149456.3991 121597.1924 129504.643 146663.8799 151515.6481 136000.0091 133332.5489 125318.8028 129195.1765 0.976157092 1.156826463 0.941189878 1.00239534 1.13521173 1.172765518 1.052670949 1.032024201 0.969995987 1 16.97919268 -8.00076108 2.959267686 0.986174906 1.065970152 0.150284047 0.07267893 0.528048432 9.052588431 0.056518277 0.020538542 9.98E-09 8.00076108 0.079795246 NVPNWHR ddPTM_A459_MK2206_30min_R1 2 NVPNWHR 7 0 F5H018;B5MDF5;J3KQE5;P62826;B4DV51 F5H018 RAN GTP-binding nuclear protein Ran 0 ; 97.473 0.031583 30776000 11748.1 12424.9 12739.2 10696 10921 11036.1 11703.8 10313.8 10431.3 10287.7 FALSE TRUE 10748.8624 11616.03675 11874.4986 11519.80777 10485.99344 11660.95444 10923.06086 10223.62753 11515.67096 11562.21794 0.929654021 1.004654713 1.027008715 0.996332004 0.906918854 1.008539581 0.944720201 0.884227194 0.995974217 1 13.49713055 -6.141094933 17.39566634 0.95278537 0.993203428 0.110596417 0.044039968 4.004450046 562.2048488 0.012859394 0.016601694 7.23E-07 6.141094933 0.040418058 NVPNWHR ddPTM_A459_MK2206_30min_R2 4 NVPNWHR 7 0 F5H018;B5MDF5;J3KQE5;P62826;B4DV51 F5H018 RAN GTP-binding nuclear protein Ran 0 ;;; 124.89 0.0087728 36440200 144527 169003 160669 183283 175044 160843 186209 149205 144358 150404 FALSE TRUE 155592.0982 160610.5568 166025.6243 168308.1926 168170.893 166963.9931 161759.5346 168706.6058 156913.9979 145496.3298 1.069388475 1.103880469 1.141098367 1.156786517 1.155842854 1.147547799 1.111777423 1.159524821 1.078473925 1 17.15062324 -8.562125139 4.118280739 1.000080039 1.131538483 0.689111065 0.027227007 0.130278548 7.091750452 0.027882456 0.007297144 2.74E-09 8.562125139 0.131458443 NVPPGLDEYNPFSDSRT(ph)PPPGGVK ddPTM_A459_MK2206_30min_R1 1 NVPPGLDEYNPFSDSRTPPPGGVK 24 1 A0A087WZA6;O15126-2;O15126 A0A087WZA6 SCAMP1 Secretory carrier-associated membrane protein 1 1 NVPPGLDEY(0.074)NPFS(0.021)DS(0.263)RT(0.642)PPPGGVK 59.614 0.012968 13727000 1925.3 1937.9 1852.3 1870 2192 1650.9 2205.3 2191.9 2146.7 1816.4 TRUE FALSE 1761.543125 1811.742358 1726.571037 2014.027724 2104.687998 1744.372531 2058.188461 2172.736449 2369.857147 2041.429345 0.862896935 0.887487173 0.845765758 0.986577238 1.030987432 0.854485871 1.008209501 1.06432116 1.160881298 1 10.99536392 -6.800889367 0.563468972 1.082150509 0.862861759 0.513445769 0.069313731 0.777521781 0.533613101 0.062339189 0.071700086 1.58E-07 6.800889367 -0.21928875 NVPQEESLEDS(ph)DVDADFK ddPTM_A459_MK2206_30min_R1 4 NVPQEESLEDSDVDADFK 18 0 O00505 O00505 KPNA3 Importin subunit alpha-4 1 NVPQEES(0.069)LEDS(0.931)DVDADFK;NVPQEESLEDS(1)DVDADFK;NVPQEESLEDS(1)DVDADFK;NVPQEES(0.006)LEDS(0.994)DVDADFK 245.1 9.76E-26 27764500 16960.8 20292.3 19171.7 16594.3 13480.5 12330.3 16312.2 14948.3 17321.4 16983.6 TRUE FALSE 15518.1949 18971.26758 17870.37842 17872.39586 12943.54314 13028.43093 15224.0429 14817.60859 19122.02152 19087.65659 0.812996337 0.993902394 0.936226945 0.936332639 0.678110646 0.682557907 0.79758575 0.776292706 1.001800374 1 14.22035237 -6.202261279 24.99528392 0.803273647 0.926321862 0.13754788 0.112570272 413.7309192 174748.562 0.033335564 0.043036019 6.28E-07 6.202261279 0.123048214 NVPQEESLEDS(ph)DVDADFK ddPTM_A459_MK2206_30min_R2 6 NVPQEESLEDSDVDADFK 18 0 O00505 O00505 KPNA3 Importin subunit alpha-4 1 NVPQEES(0.002)LEDS(0.998)DVDADFK;NVPQEESLEDS(1)DVDADFK;NVPQEESLEDS(1)DVDADFK;NVPQEESLEDS(1)DVDADFK;NVPQEESLEDS(1)DVDADFK;NVPQEES(0.003)LEDS(0.997)DVDADFK 219.99 2.29E-14 49920200 225714.3 220712 231549.3 198234.6 229258.8 166594.3 261128.8 175468.5 175256.1 248721.4 TRUE FALSE 242995.1604 209751.763 239269.0381 182038.1991 220256.9476 172934.1628 226842.2749 198402.8354 190499.5588 240605.6411 1.009931269 0.871765774 0.994444839 0.756583255 0.915427197 0.718745255 0.942796993 0.824597605 0.791750176 1 17.87631094 -5.746600703 24.99997807 0.843802842 0.950019145 0.239315972 0.087942679 334.2239325 563090.7985 0.022063635 0.0380142 1.79E-06 5.746600703 0.106216303 NVS(ph)PEFVPCEGEGGFGLHK ddPTM_A459_MK2206_30min_R1 1 NVSPEFVPCEGEGGFGLHK 19 0 O94986-3;O94986 O94986-3 CEP152 Centrosomal protein of 152 kDa 1 NVS(1)PEFVPCEGEGGFGLHK 116.44 0.00030886 13660000 2270.1 2517.8 2282.4 2081.2 2607.1 1952.2 1899.2 2227.5 2074.4 2049.5 TRUE FALSE 2077.016074 2353.890762 2127.477047 2241.494385 2503.253686 2062.731877 1772.507833 2208.025202 2290.041303 2303.407533 0.901714544 1.02191676 0.923621642 0.973121062 1.086761092 0.895513211 0.769515515 0.958590771 0.994197193 1 11.16955397 NVS(ph)PEFVPCEGEGGFGLHK ddPTM_A459_MK2206_30min_R2 2 NVSPEFVPCEGEGGFGLHK 19 0 O94986-3;O94986 O94986-3 CEP152 Centrosomal protein of 152 kDa 1 NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK 167.85 3.66E-09 17788100 84738 97183 98211 97676 97046 84099 108527 83780 80882 96722 TRUE FALSE 91225.60643 92357.03354 101485.3057 89695.55835 93235.48642 87299.44638 94277.27454 94730.33366 87916.97016 93565.96906 0.974987032 0.987079325 1.084639071 0.958634419 0.996467918 0.933025621 1.007602181 1.012444317 0.939625497 1 16.51369628 NVS(ph)TGSAENEEK ddPTM_A459_MK2206_30min_R1 1 NVSTGSAENEEK 12 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 NVS(0.408)T(0.408)GS(0.184)AENEEK 207.64 9.03E-06 7204100 2261.9 2925.1 2308 1987.1 1649.2 1366.6 1933.3 1948.7 2713.9 3169 TRUE FALSE 2069.513527 2734.675458 2151.33939 2140.146786 1583.508872 1443.975711 1804.333085 1931.662721 2996.019617 3561.599645 0.581062931 0.767822252 0.6040374 0.600894822 0.444606084 0.40542898 0.506607498 0.542358186 0.84120056 1 11.79830964 -8.41753074 3.057916545 0.995770245 0.555625311 0.715279983 0.094269636 0.14353425 2.565053315 0.104043707 0.027933887 3.82E-09 8.41753074 -0.440144934 NVS(ph)TGSAENEEK ddPTM_A459_MK2206_30min_R2 1 NVSTGSAENEEK 12 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 NVS(0.661)T(0.17)GS(0.17)AENEEK 127.32 0.0026093 7966000 42022 30281 33705 27022 28258 16784 34738 23506 20771 32598 TRUE FALSE 45239.23663 28777.28957 34828.70788 24814.21616 27148.44893 17422.72688 30176.85887 26578.31491 22577.62403 31534.32993 1.434602756 0.912570194 1.104469572 0.786895305 0.860917261 0.552500304 0.956952595 0.842837472 0.715969678 1 14.94463566 -1.522878745 0.788982062 0.812282496 138.3672838 0.601388677 0.142637385 309.3561064 1.127479882 0.049575228 75975.40051 0.03 1.522878745 137.5550013 NVSEELDRT(ph)PPEVSK ddPTM_A459_MK2206_30min_R2 1 NVSEELDRTPPEVSK 15 1 Q15393;Q15393-3 Q15393 SF3B3 Splicing factor 3B subunit 3 1 NVSEELDRT(1)PPEVSK 93.5 0.017179 19300000 126020 153860 118320 145040 160370 123370 159510 115450 111300 157850 TRUE FALSE 135668.1881 146219.5361 122264.7297 133189.768 154073.068 128064.9318 138566.1454 130539.7114 120980.6728 152699.3674 0.888465947 0.95756478 0.80068917 0.872235231 1.008996112 0.838673624 0.907444135 0.854880499 0.792280118 1 17.22033456 -9.747107065 6.772686033 0.999999997 0.882475659 0.24398362 0.063177807 6773351.639 812338.7371 0.061141628 0.015285407 1.79E-10 9.747107065 -0.117524338 NVSGIS(ph)FTENMGSSQQK ddPTM_A459_MK2206_30min_R2 1 NVSGISFTENMGSSQQK 17 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NVS(0.001)GIS(0.997)FT(0.002)ENMGSSQQK 188.96 6.98E-08 2537200 11977 12790 10649 11336 13629 9541.3 11994 8668.9 10905 11580 TRUE FALSE 12893.96833 12154.8672 11004.03235 10409.81254 13093.85698 9904.400857 10419.17339 9801.954995 11853.49719 11202.14555 1.151026674 1.085048141 0.982314709 0.929269531 1.168870456 0.884152131 0.930105161 0.875006931 1.058145258 1 13.45148746 -6.782197094 24.99434486 0.94045879 1.052567885 0.311641478 0.083288822 314.1091564 378215.9402 0.029714464 0.026233433 1.65E-07 6.782197094 0.112109094 NVSS(ph)FPDDATSPLQENR ddPTM_A459_MK2206_30min_R1 4 NVSSFPDDATSPLQENR 17 0 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 NVSS(0.999)FPDDATSPLQENR;NVS(0.007)S(0.952)FPDDAT(0.034)S(0.007)PLQENR;NVS(0.12)S(0.88)FPDDATSPLQENR;NVS(0.006)S(0.99)FPDDAT(0.004)SPLQENR 238.88 1.69E-22 42340300 5065.3 5087.97 6016.32 5801.49 6274.06 5873.65 5677.43 5278.69 4932.9 4936.06 TRUE FALSE 4634.469636 4756.742228 5607.948961 6248.321765 6024.150905 6206.210987 5298.699004 5232.53897 5445.692608 5547.576378 0.835404386 0.857445108 1.010882695 1.126315591 1.085906799 1.118724748 0.955137639 0.943211704 0.981634544 1 12.43764191 -5.267803761 4.255562975 1.033140138 0.841445298 0.58971626 0.060702147 0.148851923 6.830351149 0.01833676 0.046383681 5.40E-06 5.267803761 -0.19169484 NVSS(ph)FPDDATSPLQENR ddPTM_A459_MK2206_30min_R2 3 NVSSFPDDATSPLQENR 17 0 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 NVS(0.004)S(0.996)FPDDATSPLQENR;NVS(0.475)S(0.525)FPDDATSPLQENR;NVS(0.012)S(0.988)FPDDATSPLQENR 209.19 4.20E-09 25246600 89505 105189 108087 115368 142703 137281 130126 97964 116911 111937 TRUE FALSE 96357.57162 99965.46722 111690.5666 105942.0654 137099.7632 142505.3247 113040.2999 110768.2312 127079.7075 108284.5049 0.889855587 0.923174256 1.031454748 0.978367731 1.266106941 1.316026931 1.043919442 1.022937043 1.173572411 1 16.72446729 -6.118807848 6.973879082 1.142282069 0.955244739 0.4376513 0.100917481 0.262538344 14.02513319 0.032232184 0.04181924 7.61E-07 6.118807848 -0.187037331 NVSS(ph)YEK ddPTM_A459_MK2206_30min_R2 2 NVSSYEK 7 0 A0A0U1RR22;Q9UNF0 A0A0U1RR22 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 1 NVS(0.158)S(0.842)YEK;NVS(0.045)S(0.907)Y(0.048)EK 128.27 0.0050541 23003600 212092 244639 230325 231725 216957 182936 243670 206746 205786 224754 TRUE FALSE 228329.9266 232490.583 238003.9205 212792.3262 208438.1781 189897.7577 211675.8363 233768.4121 223684.8943 217420.2954 1.050177612 1.069314079 1.09467205 0.978714181 0.95868777 0.873413208 0.973579012 1.075191309 1.028813313 1 17.73012709 -5.769785203 24.85902449 0.981086139 1.071180532 0.392967558 0.049643723 187.5125105 558529.8429 0.015938368 0.0240898 1.70E-06 5.769785203 0.090094393 NVSSFPDDAT(ph)SPLQENR ddPTM_A459_MK2206_30min_R1 2 NVSSFPDDATSPLQENR 17 0 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 NVSSFPDDAT(0.953)S(0.047)PLQENR;NVSSFPDDAT(0.75)S(0.25)PLQENR 247.44 5.25E-30 283190000 11727.2 11570.2 10761.7 9021.6 10801.8 10390.3 11093.5 10699.9 9869.9 9101.5 TRUE FALSE 10729.74006 10816.97788 10031.22579 9716.445195 10371.54143 10978.58981 10353.47286 10606.3519 10895.91142 10229.06253 1.04894657 1.057474998 0.980659347 0.949886186 1.013928833 1.073274288 1.012162436 1.036884061 1.065191594 1 13.32038631 -6.545633465 24.55494188 1.038821498 1.007053157 0.130508872 0.03516541 394.3973415 425596.0728 0.012467562 0.012468588 2.85E-07 6.545633465 -0.031768341 NVSSFPDDAT(ph)SPLQENR ddPTM_A459_MK2206_30min_R2 2 NVSSFPDDATSPLQENR 17 0 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 NVSSFPDDAT(0.5)S(0.5)PLQENR;NVSSFPDDAT(0.915)S(0.085)PLQENR 273.77 1.40E-51 394670000 113511 120339 111579 134851 127792 122906 131773 88439 97805 120263 TRUE FALSE 122201.4894 114363.1402 115298.9882 123833.2419 122774.244 127583.274 114471.0468 99998.28096 106311.9021 116338.8282 1.050392989 0.983017811 0.99106197 1.064418852 1.055316148 1.096652562 0.983945331 0.859543478 0.91381273 1 16.82797315 -7.536832036 7.826892491 0.915900413 1.03743242 0.571356574 0.044823792 0.108916206 38.59498999 0.021319339 0.012583628 2.91E-08 7.536832036 0.121532007 NVSSFPDDATS(ph)PLQENR ddPTM_A459_MK2206_30min_R1 5 NVSSFPDDATSPLQENR 17 0 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 NVSSFPDDAT(0.233)S(0.767)PLQENR;NVSSFPDDAT(0.01)S(0.99)PLQENR;NVSSFPDDAT(0.235)S(0.765)PLQENR;NVSSFPDDAT(0.081)S(0.919)PLQENR;NVSSFPDDAT(0.229)S(0.771)PLQENR 208.07 4.90E-09 278288600 15613.34 15289.65 15362.44 12248.69 14018.23 12957.48 14633.1 13591.27 12997.65 12690.92 TRUE FALSE 14285.34344 14294.29101 14319.68038 13192.08623 13459.85422 13691.12132 13656.9526 13472.44296 14348.80223 14263.16698 1.001554806 1.002182126 1.003962191 0.924905825 0.943679215 0.959893503 0.957497912 0.94456182 1.006003944 1 13.80000673 -5.727604879 24.92334963 0.958969126 1.002528014 0.375809136 0.023459776 172.5281681 127087.2924 0.006217491 0.010768235 1.87E-06 5.727604879 0.043558887 NVSSFPDDATS(ph)PLQENR ddPTM_A459_MK2206_30min_R2 4 NVSSFPDDATSPLQENR 17 0 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 NVSSFPDDAT(0.424)S(0.576)PLQENR;NVSSFPDDAT(0.009)S(0.991)PLQENR;NVSSFPDDAT(0.038)S(0.962)PLQENR;NVSSFPDDAT(0.031)S(0.969)PLQENR 233.57 9.40E-17 148704600 137075 147906 131071 159659 147206 150705 166391 118799 117586 148930 TRUE FALSE 147569.5674 140561.2031 135440.8417 146614.349 141425.9528 156440.1844 144543.6618 134326.4372 127813.4177 144070.4263 1.024287713 0.975642307 0.940101624 1.017657494 0.981644578 1.085859107 1.003284751 0.932366487 0.887159294 1 17.13641469 -7.761451972 13.96593837 0.932314012 1.003323191 0.305354573 0.043943899 0.077501209 1804.347158 0.022722114 0.012019572 1.73E-08 7.761451972 0.071009179 NVST(ph)GSAENEEK ddPTM_A459_MK2206_30min_R1 2 NVSTGSAENEEK 12 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 NVS(0.072)T(0.779)GS(0.149)AENEEK;NVS(0.059)T(0.634)GS(0.306)AENEEK 191.19 0.00032998 46046000 5318.9 6350.5 6406 4731.6 3451.6 3324.2 5654.9 4389.6 6783.2 8115.8 TRUE FALSE 4866.499624 5937.081296 5971.178568 5096.028652 3314.115463 3512.413331 5277.671939 4351.22219 7488.337914 9121.246575 0.533534488 0.650906786 0.654645011 0.558698705 0.36334019 0.385080406 0.57861301 0.477042491 0.820977468 1 13.15501529 -8.443085325 3.257626131 0.997157367 0.526585257 0.743667306 0.093115843 0.124103753 2.594066256 0.101180553 0.026940249 3.61E-09 8.443085325 -0.47057211 NVSTCEVSSSQAISS(ph)PQR ddPTM_A459_MK2206_30min_R2 2 NVSTCEVSSSQAISSPQR 18 0 Q9H2X6-3;Q9H2X6 Q9H2X6-3 HIPK2 Homeodomain-interacting protein kinase 2 1 NVSTCEVSSSQAIS(0.393)S(0.607)PQR;NVSTCEVSSSQAIS(0.106)S(0.894)PQR 318.9 6.16E-127 11379100 37086 40870 36818 42183 42137 38600 39851 32420 42544 37653 TRUE FALSE 39925.33267 38840.45523 38045.49374 38736.51396 40482.48966 40068.95005 34618.51583 36657.40531 46244.40022 36424.38569 1.096115471 1.066331099 1.044506119 1.063477482 1.111411734 1.100058362 0.950421405 1.006397352 1.269600004 1 15.15261702 -14.5227597 0.002955662 9.79E-05 2.082219473 0.009702363 0.081506504 1487875.515 333.4304721 122809.7123 112294.6379 3.00E-15 14.5227597 2.082121598 NVSTGS(ph)AENEEK ddPTM_A459_MK2206_30min_R1 3 NVSTGSAENEEK 12 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 NVS(0.002)T(0.026)GS(0.972)AENEEK;NVST(0.012)GS(0.988)AENEEK;NVS(0.001)T(0.008)GS(0.991)AENEEK 204.67 2.85E-05 85904000 11955.4 13359.2 12558.7 9604.8 8502.7 7552.2 11301.6 9658.5 14671.8 16794.4 TRUE FALSE 10938.53045 12489.51365 11706.25043 10344.56336 8164.019454 7979.799038 10547.69088 9574.056753 16196.98611 18875.01706 0.579524268 0.661695489 0.620198138 0.548055842 0.432530441 0.422770428 0.558817555 0.507234336 0.858117694 1 14.20419033 -8.397879303 3.361152784 0.995248998 0.54078633 0.828527526 0.071740151 0.100919951 2.030665603 0.07920074 0.021143768 4.00E-09 8.397879303 -0.454462667 NVSTGS(ph)AENEEK ddPTM_A459_MK2206_30min_R2 4 NVSTGSAENEEK 12 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 NVS(0.008)T(0.003)GS(0.989)AENEEK;NVS(0.023)T(0.047)GS(0.93)AENEEK;NVST(0.01)GS(0.99)AENEEK;NVS(0.019)T(0.019)GS(0.963)AENEEK 164.7 0.00042539 143839500 233464 165068 185905 159229 158373 117730 191537 167229 124977 211805 TRUE FALSE 251338.1833 156870.9632 192102.9799 146219.4814 152154.4803 122210.2976 166387.9618 189086.4045 135847.2736 204893.8202 1.226675276 0.765620764 0.937573323 0.71363539 0.742601608 0.596456728 0.812069206 0.922850696 0.663013035 1 17.64451695 -2.810217615 1.546482439 0.780141989 199.9875066 0.510630172 0.123934686 484.9512811 3.417398019 0.033607615 340661.3301 0.001548041 2.810217615 199.2073646 NVTELNEPLSNEER ddPTM_A459_MK2206_30min_R2 2 NVTELNEPLSNEER 14 0 P61981 P61981 YWHAG "14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed" 0 ; 234.04 1.30E-12 23388000 54630 68492 66767 60728 64906 62416 59508 61768 60342 69400 FALSE TRUE 58812.5148 65090.78688 68992.97846 55766.32814 62357.46431 64791.28462 51694.52812 69841.28968 65590.43809 67135.48368 0.876027275 0.969543724 1.027667854 0.830653554 0.928830194 0.965082562 0.770003064 1.040303664 0.976986155 1 16.03478787 NVVHELR ddPTM_A459_MK2206_30min_R1 1 NVVHELR 7 0 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 89.296 0.043767 1172000 1707.5 1590.8 1413.3 1267.5 1788.6 1436.4 1572.1 1421.6 1357.2 1846.3 FALSE TRUE 1562.268159 1487.238631 1317.369134 1365.12307 1717.356275 1517.727727 1467.228077 1409.171101 1498.285797 2075.033583 0.752888132 0.716729909 0.634866416 0.657879988 0.827628183 0.731423211 0.707086425 0.679107612 0.722053758 1 11.01891897 -8.598896846 19.24734664 1 0.712487663 0.742960549 0.050414825 3807.893796 964136.2075 0.051827843 0.013381892 2.52E-09 8.598896846 -0.287512337 NVVHELR ddPTM_A459_MK2206_30min_R2 2 NVVHELR 7 0 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ; 107.9 0.023183 4457500 36811 45247 40415 41054 43940 39517 49588 34454 34895 40718 FALSE TRUE 39629.27846 43000.09978 41762.41593 37699.75687 42214.69482 41020.84713 43077.03603 38957.2561 37930.10402 39389.37499 1.006090563 1.091667481 1.060245712 0.957104724 1.071727968 1.041419092 1.093620705 0.989029557 0.962952675 1 15.2655189 -7.908417811 8.685756132 0.979689584 1.045615766 0.344151345 0.039281949 0.288319355 24.12268271 0.021539855 0.010315888 1.23E-08 7.908417811 0.065926182 NVYATTVGT(ph)PYK ddPTM_A459_MK2206_30min_R2 1 NVYATTVGTPYK 12 0 Q13439-3;Q13439-4;Q13439;Q13439-5;H0Y6I0 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 NVYATT(0.001)VGT(0.999)PYK 121.76 0.0051659 0 19378 14156 18236 17895 15493 11333 19176 14161 11312 16352 TRUE FALSE 20861.59458 13453.03362 18843.97914 16432.92126 14884.66697 11764.28526 16658.16817 16011.89132 12295.89731 15818.43558 1.318815282 0.850465494 1.191266927 1.038846173 0.940969598 0.743707252 1.053085691 1.012229765 0.777314372 1 13.94931931 -6.179191419 3.584015079 0.918875016 1.095143251 0.279555613 0.142860614 0.352040896 8.663322522 0.042493585 0.055651088 6.62E-07 6.179191419 0.176268236 NVYSS(ph)SR ddPTM_A459_MK2206_30min_R2 2 NVYSSSR 7 0 O75494-2;O75494;Q5JRI1;O75494-5;O75494-4;O75494-6;O75494-3 O75494-2;O75494-6 SRSF10 Serine/arginine-rich splicing factor 10 1 NVYS(0.087)S(0.91)S(0.003)R;NVYS(0.014)S(0.493)S(0.493)R 106.68 0.017017 76409000 150510 180604 190374 205879 196604 153408 245463 152712 140695 186398 TRUE FALSE 162033.1613 171635.468 196720.9741 189058.0271 188884.3391 159246.0489 213233.4132 172671.9827 152932.3968 180315.8485 0.898607431 0.951860135 1.090979943 1.048482586 1.047519343 0.883150595 1.182555028 0.957608464 0.84813619 1 17.46016668 -10.4866066 6.792894335 1 0.996731036 0 0.098399313 4.06E-10 1.04E-10 0.095237896 0.02309858 3.26E-11 10.4866066 -0.003268964 NVYSSS(ph)RYDDYDR ddPTM_A459_MK2206_30min_R1 2 NVYSSSRYDDYDR 13 1 O75494-2;O75494;Q5JRI1;O75494-5;O75494-4;O75494-6;O75494-3 O75494-2;O75494-6 SRSF10 Serine/arginine-rich splicing factor 10 1 NVYSS(0.001)S(0.999)RYDDYDR;NVYS(0.052)S(0.428)S(0.504)RY(0.007)DDY(0.007)DR 163.62 0.001723 17724400 4844 4924.4 5965.7 6558.8 6814.8 4559.3 4805.1 7177 3078.73 1841.29 TRUE FALSE 4431.992363 4603.820665 5560.764905 7063.959912 6543.352085 4817.443626 4484.560546 7114.252246 3398.775001 2069.402906 2.141676882 2.224709674 2.687134965 3.413525656 3.161951723 2.327938949 2.167079467 3.437828479 1.642394041 1 11.01499885 -8.484074279 5.635856969 1.002194776 2.685618738 0.590677019 0.472489429 0.118870983 10.00846226 0.48148298 0.124942969 3.28E-09 8.484074279 1.683423962 NWS(ph)LSQVNVSHAR ddPTM_A459_MK2206_30min_R1 1 NWSLSQVNVSHAR 13 0 P55291 P55291 CDH15 Cadherin-15 1 NWS(0.797)LS(0.203)QVNVSHAR 89.46 0.022431 28807000 1775.7 1981.4 1836.2 1462 1974.7 1797.5 1864.8 1777 1633.7 1490 TRUE FALSE 1624.66739 1852.4105 1711.56386 1574.603493 1896.043518 1899.272897 1740.402595 1761.463876 1803.528961 1674.592449 0.970186741 1.106185867 1.022077856 0.940290573 1.132241769 1.134170226 1.039299201 1.051876161 1.076995756 1 10.70959431 -6.274636852 24.99510872 1.076454742 1.01746334 0.23081577 0.055097395 1298.031076 2458376.532 0.017483396 0.019954345 5.31E-07 6.274636852 -0.058991402 NWTEDMEGGIS(ph)SPVK ddPTM_A459_MK2206_30min_R1 1 NWTEDMEGGISSPVK 15 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.751)S(0.249)PVK 217.79 3.07E-09 32439000 7249.7 8059.7 7680.4 6821.9 6050.3 5667.2 6220.3 6682.5 6788.5 6915.1 TRUE FALSE 6633.074945 7535.012065 7159.075847 7347.32392 5809.303739 5988.071967 5805.355137 6624.075607 7494.188868 7771.794794 0.853480453 0.96953307 0.921161204 0.94538316 0.747485477 0.770487658 0.746977409 0.852322505 0.964280332 1 12.92403209 -4.395739321 13.60683196 0.869402676 0.000287269 0 0.091903847 2329059.603 2347360.798 0.024633434 61674960.16 4.02E-05 4.395739321 -0.869115406 NWTEDMEGGIS(ph)SPVK ddPTM_A459_MK2206_30min_R2 1 NWTEDMEGGISSPVK 15 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.5)S(0.5)PVK 114.31 0.0096639 5417400 28746 29694 25523 28342 26323 23610 38991 22599 26023 28818 TRUE FALSE 30946.81586 28219.43914 26373.92408 26026.36794 25289.42676 24508.49509 33871.43486 25552.76689 28286.4335 27877.67102 1.110093302 1.012259565 0.94605909 0.933591903 0.907157084 0.879144283 1.215002316 0.916603359 1.01466272 1 14.76682242 -9.868312266 15.3026989 1.000003658 0.988633484 0 0.097922332 0 0 0.095355682 0.02312715 1.35E-10 9.868312266 -0.011370174 NWTEDMEGGIS(ph)SPVKK ddPTM_A459_MK2206_30min_R1 1 NWTEDMEGGISSPVKK 16 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.5)S(0.5)PVKK 70.987 0.029329 33774000 3378.8 3751.7 3699.3 3327.5 2727.1 2577 2627.5 2862.7 3364.3 2911 TRUE FALSE 3091.415317 3507.463648 3448.201823 3583.784627 2618.473832 2722.907513 2452.224269 2837.671716 3714.031024 3271.636657 0.944914011 1.072082268 1.053968452 1.095410341 0.80035594 0.832276869 0.749540529 0.867355398 1.135221118 1 11.67579682 -6.255233147 24.98834731 0.880171117 1.044655427 0.288127489 0.108933818 603.3311009 2429209.606 0.033435007 0.042067909 5.56E-07 6.255233147 0.16448431 NWTEDMEGGISS(ph)PVK ddPTM_A459_MK2206_30min_R1 1 NWTEDMEGGISSPVK 15 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.066)S(0.934)PVK 254.56 1.47E-28 34730000 9215 9796.3 10198 8795.7 7160.6 7049.3 7648.7 7917.3 8546.1 7866.3 TRUE FALSE 8431.21586 9158.559089 9505.788173 9473.146338 6875.378139 7448.425274 7138.469179 7848.079881 9434.497678 8840.836632 0.953667194 1.035938053 1.075213644 1.071521478 0.777684107 0.842502309 0.80744272 0.887707828 1.067149872 1 13.10996719 -6.243549056 24.90385948 0.884255664 1.037155209 0.368444637 0.086868438 808.4320742 1125361.193 0.026474628 0.034106904 5.71E-07 6.243549056 0.152899546 NWTEDMEGGISS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 NWTEDMEGGISSPVK 15 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.237)S(0.763)PVK;NWTEDMEGGIS(0.023)S(0.977)PVK 235.78 4.62E-15 24122000 87711 85030 80778 90116 92424 70377 98082 78958 77856 94355 TRUE FALSE 94426.2216 80807.53385 83471.0982 82753.23453 88794.96937 73055.24605 85203.71558 89278.0817 84627.77415 91276.20408 1.03451083 0.885307783 0.914489149 0.906624409 0.972816193 0.800375594 0.933471286 0.978109055 0.927161411 1 16.47795117 -8.546440491 1.044582766 0.996214946 0.91914569 0.11533079 0.058962273 1.194786873 2.854537753 0.05516169 0.018031396 2.84E-09 8.546440491 -0.077069256 NWTEDMEGGISS(ph)PVKK ddPTM_A459_MK2206_30min_R1 3 NWTEDMEGGISSPVKK 16 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.096)S(0.904)PVKK;NWTEDMEGGIS(0.013)S(0.987)PVKK;NWTEDMEGGIS(0.161)S(0.839)PVKK 197.73 1.85E-06 357694000 18624.7 18460.9 19909.4 17996.4 15181.4 13490.6 15615.2 16882.8 17159.1 15271 TRUE FALSE 17040.57146 17259.09205 18558.0054 19382.48585 14576.69269 14254.42611 14573.5385 16735.19546 18942.84985 17162.88677 0.992873267 1.005605426 1.081286945 1.12932551 0.849314739 0.830537794 0.849130959 0.975080456 1.103710005 1 14.06700461 -6.262457808 24.99993248 0.923903554 1.051011843 0.307884186 0.085500387 118.739094 2914758.07 0.028414123 0.034129097 5.46E-07 6.262457808 0.127108289 NWTEDMEGGISS(ph)PVKK ddPTM_A459_MK2206_30min_R2 5 NWTEDMEGGISSPVKK 16 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.037)S(0.963)PVKK;NWTEDMEGGIS(0.065)S(0.935)PVKK;NWTEDMEGGIS(0.085)S(0.915)PVKK;NWTEDMEGGIS(0.08)S(0.92)PVKK;NWTEDMEGGIS(0.113)S(0.887)PVKK 206.13 1.47E-07 244303000 456681 435503 410840 419289 433576 292664 484277 372766 345749 465001 TRUE FALSE 491644.8485 413876.5543 424537.2005 385031.7475 416551.6277 303801.5336 420690.8482 421487.7961 375821.623 449828.0555 1.092961727 0.920077237 0.943776617 0.855953164 0.926024117 0.675372578 0.9352259 0.936997573 0.835478398 1 18.77901412 NY(ph)ERDMDIIMK ddPTM_A459_MK2206_30min_R1 1 NYERDMDIIMK 11 1 Q9BRS2 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 1 NY(1)ERDMDIIMK 68.371 0.035938 0 584.02 668.75 532.05 441.12 631.24 487.89 534.41 492.34 495.23 502.1 TRUE FALSE 534.3460322 625.2142534 495.9359284 475.0951388 606.0963741 515.5139102 498.760484 488.0355233 546.7109307 564.3039387 0.946911754 1.107938844 0.878845414 0.841913562 1.074060152 0.913539451 0.883850794 0.864845148 0.968823524 1 9.140328609 NY(ph)TVPDPPGLFDGHVWPMY(ph)QK ddPTM_A459_MK2206_30min_R1 1 NYTVPDPPGLFDGHVWPMYQK 21 0 Q9NPI5;Q9NPI5-3 Q9NPI5 NMRK2 Nicotinamide riboside kinase 2 2 NY(0.688)T(0.312)VPDPPGLFDGHVWPMY(1)QK 49.036 0.039856 0 709.38 641.31 836.63 624.41 888.33 655.19 780.72 785.28 617.3 708.28 TRUE FALSE 649.0435059 599.5606024 779.8418866 672.5021664 852.945935 692.2862916 728.6395933 778.4143798 681.470544 796.0270736 0.815353557 0.75319122 0.979667542 0.844823234 1.071503675 0.869676817 0.915345241 0.977874253 0.856089656 1 9.636673689 -5.258693949 24.99780598 0.936577304 0.784272378 0.446970198 0.068953174 199.2017306 1813756.689 0.016580575 0.040015399 5.51E-06 5.258693949 -0.152304925 NYADHVR ddPTM_A459_MK2206_30min_R2 1 NYADHVR 7 0 Q6P587;Q6P587-2;Q6P587-3 Q6P587 FAHD1 "Acylpyruvase FAHD1, mitochondrial" 0 143.85 0.0046584 992110 5486.8 5667.7 6739.6 6550.8 4879.9 5242.7 6031.3 3649.4 6832.7 5706.7 FALSE TRUE 5906.873627 5386.25026 6964.2949 6015.578685 4688.290606 5442.214622 5239.383065 4126.38911 7426.995895 5520.490846 1.069990657 0.975683215 1.261535449 1.089681851 0.849252492 0.985820785 0.949079205 0.747467793 1.34535064 1 12.43058083 -6.087973596 10.84051628 0.96584197 1.103980518 0.118017057 0.157985465 1.183352224 141.2255397 0.045066727 0.058220685 8.17E-07 6.087973596 0.138138548 NYDPYKPLDIT(ph)PPPDQK ddPTM_A459_MK2206_30min_R1 2 NYDPYKPLDITPPPDQK 17 1 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 NYDPYKPLDIT(1)PPPDQK;NYDPYKPLDIT(1)PPPDQK 88.945 0.013568 48440200 6229.9 6829.6 6208.9 5221.8 4852.3 4217.8 4757.2 5265.3 5776.8 4986.7 TRUE FALSE 5700.01429 6384.991799 5787.457167 5623.983941 4659.022616 4456.608191 4439.855868 5219.266037 6377.319032 5604.490044 1.017044235 1.139263653 1.032646525 1.003478264 0.831301792 0.795185317 0.792196227 0.93126511 1.137894614 1 12.45236739 -5.974887305 3.049766764 0.899555515 1.070866382 0.291586191 0.102349111 0.306003469 5.851344583 0.032820685 0.049410021 1.06E-06 5.974887305 0.171310867 NYDPYKPLDIT(ph)PPPDQK ddPTM_A459_MK2206_30min_R2 1 NYDPYKPLDITPPPDQK 17 1 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 NYDPYKPLDIT(1)PPPDQK 93.738 0.0099276 13155000 75351 90007 87812 80851 72491 51605 81317 69274 69687 82957 TRUE FALSE 81119.9305 85537.38326 90739.60825 74245.21467 69644.6391 53568.86444 70639.98022 78328.34965 75748.24929 80250.11988 1.010838745 1.065884803 1.13070994 0.925172632 0.867844674 0.667523793 0.88024766 0.976052743 0.943902008 1 16.29221593 -5.901951793 5.143979864 0.878130243 1.067639097 0.44305553 0.089841773 0.195874133 8.327234044 0.027684139 0.041778258 1.25E-06 5.901951793 0.189508854 NYGS(ph)PLISGSTPK ddPTM_A459_MK2206_30min_R1 1 NYGSPLISGSTPK 13 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NYGS(0.999)PLIS(0.001)GSTPK 172.57 0.00017217 28984000 8146.7 8113 8229.9 6719.4 7082.1 5622.1 7220.3 6746.5 7204 6667.5 TRUE FALSE 7453.780385 7584.842225 7671.277318 7236.929352 6800.00496 5940.418443 6738.646961 6687.516062 7952.88158 7493.520237 0.994696771 1.012186794 1.023721439 0.965758298 0.907451337 0.792740695 0.899263196 0.892439848 1.061301141 1 12.8714279 -6.037020463 3.440774365 0.912717185 1.009705621 0.228423041 0.067252432 0.320576295 7.793586631 0.020936405 0.02964859 9.18E-07 6.037020463 0.096988436 NYGS(ph)PLISGSTPK ddPTM_A459_MK2206_30min_R2 4 NYGSPLISGSTPK 13 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NYGS(0.912)PLIS(0.087)GS(0.001)TPK;NYGS(0.941)PLIS(0.059)GSTPK;NYGS(1)PLISGSTPK;NYGS(0.965)PLIS(0.029)GS(0.006)TPK 154.81 0.00012803 25828000 198526 254380 197683 237932 230763 183919 242292 198182 176675 209095 TRUE FALSE 213725.3032 241747.8591 204273.6526 218492.1945 221702.0851 190918.1664 210478.7694 224085.0679 192041.8721 202272.2473 1.056621984 1.195160791 1.009894611 1.080188693 1.096057853 0.943867332 1.040571666 1.107838919 0.949422745 1 17.62593886 -5.843360568 0.805761625 1.019448333 1.121256113 0.226094073 0.064062213 1.308121995 1.578895479 0.030127098 0.09173678 1.43E-06 5.843360568 0.10180778 NYGSPLIS(ph)GSTPK ddPTM_A459_MK2206_30min_R1 1 NYGSPLISGSTPK 13 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NYGS(0.047)PLIS(0.629)GS(0.3)T(0.024)PK 98 0.012913 2007800 2144.9 1649 1579 1669.3 1574.4 1727.6 1806.8 1683.7 1543.6 1685.2 TRUE FALSE 1962.464992 1541.6498 1471.821879 1797.869775 1511.688314 1825.415219 1686.271669 1668.979588 1704.062744 1893.975299 1.036161872 0.813975663 0.77710722 0.949257246 0.798156299 0.963800964 0.890334562 0.881204517 0.899728072 1 10.8872018 -6.782604011 24.99987141 0.917296437 0.870239672 0.090697773 0.078835299 682.4261513 806083.0822 0.027206537 0.024016411 1.65E-07 6.782604011 -0.047056766 NYGSPLISGST(ph)PK ddPTM_A459_MK2206_30min_R1 1 NYGSPLISGSTPK 13 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NYGS(0.009)PLIS(0.072)GS(0.072)T(0.846)PK 210.07 1.78E-05 25264000 10310 12111 10804 9830.2 8169.4 7586.8 9532.8 8983.8 10433 10061 TRUE FALSE 9433.08036 11322.5717 10070.65458 10587.32371 7843.995499 8016.35806 8896.884306 8905.255584 11517.54768 11307.43264 0.834237149 1.001338859 0.890622558 0.936315435 0.693702607 0.708945905 0.786817361 0.787557695 1.01858203 1 13.46498378 -6.187961716 24.9999947 0.813504645 0.91996474 0.107468322 0.108906892 252.0857578 85768.38772 0.032175439 0.041538308 6.49E-07 6.187961716 0.106460095 NYGYNPS(ph)PVKPEGLR ddPTM_A459_MK2206_30min_R1 4 NYGYNPSPVKPEGLR 15 1 E9PRF4;Q15047-3;Q15047 E9PRF4 SETDB1 Histone-lysine N-methyltransferase SETDB1 1 NYGYNPS(1)PVKPEGLR;NYGYNPS(1)PVKPEGLR;NYGY(0.001)NPS(0.999)PVKPEGLR;NYGYNPS(1)PVKPEGLR 173.19 0.00016121 84177300 13166.8 14448.9 13204 12588.4 10383.8 10244.3 10252.6 11843.3 12442.5 10895.2 TRUE FALSE 12046.89452 13508.27398 12307.74927 13557.96075 9970.191258 10824.32341 9568.667761 11739.75528 13735.9424 12244.97963 0.983823157 1.103168351 1.005126153 1.107226076 0.814226855 0.883980516 0.781435988 0.958740286 1.121761147 1 13.57990275 -6.249630241 24.97472955 0.915229556 1.050451837 0.276194586 0.096596808 971.4986349 2054587.059 0.029658231 0.037970755 5.63E-07 6.249630241 0.135222281 NYGYNPS(ph)PVKPEGLR ddPTM_A459_MK2206_30min_R2 4 NYGYNPSPVKPEGLR 15 1 E9PRF4;Q15047-3;Q15047 E9PRF4 SETDB1 Histone-lysine N-methyltransferase SETDB1 1 NYGYNPS(1)PVKPEGLR;NYGY(0.001)NPS(0.999)PVKPEGLR;NYGYNPS(1)PVKPEGLR;NYGYNPS(1)PVKPEGLR 189.04 0.00012203 146396000 363257 391630 363086 333286 364029 261276 422614 310683 291592 407492 TRUE FALSE 391068.2352 372182.2237 375191.106 306055.4677 349735.3924 271219.0413 367124.2741 351290.3348 316954.1451 394195.5694 0.992066541 0.944156283 0.951789252 0.776405144 0.887212895 0.688031684 0.931325217 0.891157492 0.804053038 1 18.58855204 -5.654688053 7.906829403 0.847328536 0.96281603 0.267120624 0.08209164 0.297574668 19.94390651 0.021455931 0.037250816 2.21E-06 5.654688053 0.115487494 NYILDQTNVYGS(ph)AQR ddPTM_A459_MK2206_30min_R1 4 NYILDQTNVYGSAQR 15 0 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 1 NYILDQTNVYGS(1)AQR;NYILDQTNVYGS(1)AQR;NYILDQTNVYGS(1)AQR;NYILDQTNVYGS(1)AQR 285.18 8.87E-56 42047300 9688.2 10963.2 10235.5 8643.7 9139.36 8896.5 10018.27 8946.08 9381.04 8447.47 TRUE FALSE 8864.167715 10249.49369 9540.742778 9309.439272 8775.319938 9400.212142 9349.969488 8867.865366 10356.23268 9494.006359 0.93365934 1.079575187 1.004922729 0.98055962 0.924301039 0.990120692 0.984828652 0.934048813 1.090817963 1 13.2128013 -8.262839897 24.9987181 1.045408976 0.982011872 0.239191838 0.047129843 192.8728666 3442511.644 0.038036113 0.011908727 5.46E-09 8.262839897 -0.063397104 NYILDQTNVYGS(ph)AQR ddPTM_A459_MK2206_30min_R2 4 NYILDQTNVYGSAQR 15 0 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 1 NYILDQTNVYGS(1)AQR;NYILDQTNVYGS(1)AQR;NYILDQTNVYGS(1)AQR;NYILDQTNVYGS(1)AQR 246.38 7.92E-28 43992000 148831 185062 155987 196279 190039 176117 184241 133878 145373 158940 TRUE FALSE 160225.6158 175872.0902 161187.5287 180242.3778 182577.114 182819.2558 160049.9354 151376.3143 158017.2808 153753.8008 1.042092065 1.143855236 1.048348255 1.172279169 1.187464069 1.189038937 1.040949456 0.984537055 1.027729265 1 17.23026255 -7.445450419 5.45088964 1.005771898 1.131493286 0.583670947 0.049185592 0.165151073 8.564488177 0.022443289 0.014738586 3.59E-08 7.445450419 0.125721389 NYPS(ph)QEELIK ddPTM_A459_MK2206_30min_R1 2 NYPSQEELIK 10 0 P38398-8;P38398-4;P38398;P38398-7;H0Y8B8;B7ZA85;E7EUM2;A0A2R8Y7V5;P38398-6;P38398-5;P38398-3;K7EPC7 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 NYPS(1)QEELIK;NYPS(1)QEELIK 151.55 0.00066774 33835000 9165.5 9730.4 10029.4 8339 8820.6 8165.3 9654.8 9087.8 8856.5 8354.1 TRUE FALSE 8385.926095 9096.949191 9348.632272 8981.271225 8469.256824 8627.61223 9010.745908 9008.346323 9777.164868 9389.068978 0.893158429 0.968887247 0.995693214 0.956566753 0.902033721 0.918899653 0.959706008 0.959450436 1.041334864 1 13.19676639 -8.126881152 4.192852193 1.019926476 0.944179205 0.497194913 0.030986252 0.209457505 5.912727217 0.024644632 0.008573004 7.47E-09 8.126881152 -0.075747271 NYPS(ph)QEELIK ddPTM_A459_MK2206_30min_R2 3 NYPSQEELIK 10 0 P38398-8;P38398-4;P38398;P38398-7;H0Y8B8;B7ZA85;E7EUM2;A0A2R8Y7V5;P38398-6;P38398-5;P38398-3;K7EPC7 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 NYPS(1)QEELIK;NYPS(1)QEELIK;NY(0.001)PS(0.999)QEELIK 124.47 0.0038317 38771600 170612 187356 202037 194405 195896 151367 235130 151948 161895 185192 TRUE FALSE 183674.1859 178052.1735 208772.8127 178521.4896 188204.1387 157127.3773 204257.1486 171808.1253 175976.3345 179149.2002 1.025258196 0.993876463 1.165357213 0.996496158 1.050544119 0.877075516 1.140151049 0.959022564 0.982289255 1 17.45080208 NYQQNY(ph)QNSESGEKNEGSESAPEGQAQQR ddPTM_A459_MK2206_30min_R2 1 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 H0Y449;P67809;C9J5V9 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 NY(0.001)QQNY(0.453)QNS(0.384)ES(0.12)GEKNEGS(0.032)ES(0.009)APEGQAQQR 58.191 0.045566 140590000 3251.4 6303 3197.1 3908.3 4093.3 3000.3 5850.5 3040.7 3345.6 4897.4 TRUE FALSE 3500.329684 5990.002185 3303.689718 3588.979388 3932.576475 3114.478519 5082.322322 3438.12993 3636.594241 4737.598239 0.738840549 1.26435419 0.697334293 0.7575525 0.830078085 0.657396082 1.072763469 0.725711586 0.76760292 1 12.20994014 -5.298460958 24.99655857 0.80602924 1.001598108 0.161393299 0.170767814 800.2156281 540295.3131 0.041768525 0.086950895 5.03E-06 5.298460958 0.195568868 NYQQNYQNS(ph)ESGEK ddPTM_A459_MK2206_30min_R1 4 NYQQNYQNSESGEK 14 0 H0Y449;P67809;C9J5V9 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNYQNS(0.999)ES(0.001)GEK;NYQQNYQNS(0.999)ES(0.001)GEK;NYQQNYQNS(0.999)ES(0.001)GEK;NYQQNYQNS(0.999)ES(0.001)GEK 305.14 1.55E-80 55807000 15760.5 18661.5 16904.3 12691.6 10466.6 10370.4 15337.2 13079.2 22188.7 27151.1 TRUE FALSE 14419.98671 17446.63296 15756.88321 13669.10923 10049.69316 10957.56309 14314.08337 12964.84993 24495.29477 30514.78325 0.472557403 0.57174363 0.51636884 0.447950396 0.329338507 0.359090314 0.469086844 0.424871113 0.802735335 1 14.89722072 -8.420335333 2.985450948 0.996214036 0.447807172 0.882651037 0.067702973 0.083720971 1.446625946 0.07450554 0.020042499 3.80E-09 8.420335333 -0.548406864 down NYQQNYQNS(ph)ESGEK ddPTM_A459_MK2206_30min_R2 3 NYQQNYQNSESGEK 14 0 H0Y449;P67809;C9J5V9 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNYQNS(1)ESGEK;NYQQNYQNS(1)ESGEK;NYQQNYQNS(0.988)ES(0.012)GEK 237.05 2.37E-19 78061000 266088 164918 192029 153415 134371 105998 204120 170983 106980 216095 TRUE FALSE 286459.9019 156728.4119 198431.151 140880.5037 129094.9194 110031.8282 177318.7988 193331.0652 116284.927 209043.8378 1.370334112 0.74973945 0.949232243 0.673928039 0.617549509 0.526357674 0.848237387 0.924835035 0.556270533 1 17.67344599 -2.722589508 1.388480388 0.739061021 199.9911301 0.551316296 0.162256966 338.3384285 2.717194379 0.046082962 212711.9607 0.001894133 2.722589508 199.252069 NYQQNYQNS(ph)ESGEKNEGSESAPEGQAQQR ddPTM_A459_MK2206_30min_R1 5 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 H0Y449;P67809;C9J5V9 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNY(0.022)QNS(0.785)ES(0.19)GEKNEGS(0.003)ES(0.001)APEGQAQQR;NYQQNY(0.009)QNS(0.816)ES(0.175)GEKNEGSESAPEGQAQQR;NYQQNY(0.004)QNS(0.603)ES(0.389)GEKNEGS(0.003)ES(0.001)APEGQAQQR;NYQQNY(0.001)QNS(0.868)ES(0.128)GEKNEGS(0.003)ES(0.001)APEGQAQQR;NYQQNY(0.083)QNS(0.301)ES(0.301)GEKNEGS(0.24)ES(0.075)APEGQAQQR 132.84 5.13E-14 421399600 3904.2 4130.66 4983.41 4268.705 3548.87 2944.58 3559.6 3946.17 4040.59 3737.99 TRUE FALSE 3572.127288 3861.753283 4645.150014 4597.481399 3407.510993 3111.299575 3322.145579 3911.669052 4460.62379 4201.080422 0.850287766 0.919228602 1.105703664 1.094356912 0.81110349 0.7405951 0.790783619 0.931110252 1.061780148 1 12.03654469 -4.786519195 5.472019843 0.932827032 0.847705062 0.044056579 0.122122186 0.638858657 53.02891996 0.034404187 0.186803253 1.63E-05 4.786519195 -0.08512197 NYQQNYQNS(ph)ESGEKNEGSESAPEGQAQQR ddPTM_A459_MK2206_30min_R2 4 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 H0Y449;P67809;C9J5V9 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNY(0.002)QNS(0.986)ES(0.012)GEKNEGSESAPEGQAQQR;NYQQNY(0.008)QNS(0.43)ES(0.295)GEKNEGS(0.202)ES(0.065)APEGQAQQR;NYQQNY(0.02)QNS(0.514)ES(0.391)GEKNEGS(0.058)ES(0.018)APEGQAQQR;NYQQNY(0.02)QNS(0.784)ES(0.194)GEKNEGS(0.002)ES(0.001)APEGQAQQR 133.53 4.96E-14 586390000 67912.1 84380.3 78555 68889.7 83762.8 53243.6 89476 64185.9 66261.6 87647.9 TRUE FALSE 73111.50259 80190.097 81173.98449 63261.19114 80473.8516 55269.82251 77727.69372 72575.21751 72024.91419 84787.9562 0.862286413 0.945772261 0.957376355 0.74611058 0.949118899 0.651859356 0.916730361 0.855961398 0.84947105 1 16.37157173 -5.720050812 24.99989229 0.845059029 0.924207757 0.093771936 0.096242754 307.6022642 185798.3477 0.024547355 0.042516682 1.91E-06 5.720050812 0.079148728 NYQQNYQNSES(ph)GEK ddPTM_A459_MK2206_30min_R2 1 NYQQNYQNSESGEK 14 0 H0Y449;P67809;C9J5V9 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNYQNS(0.007)ES(0.993)GEK 257.48 1.24E-35 36338000 238410 150900 163130 127980 134190 105520 168040 140210 101450 199700 TRUE FALSE 256662.8529 143406.5254 168568.6728 117523.6246 128921.0263 109535.6375 145976.1461 158535.9284 110273.9376 193183.8054 1.328594043 0.742332025 0.872581801 0.608351328 0.667349036 0.567002174 0.755633454 0.820648129 0.570823923 1 17.55961463 NYQQNYQNSES(ph)GEKNEGSESAPEGQAQQR ddPTM_A459_MK2206_30min_R1 2 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 H0Y449;P67809;C9J5V9 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNY(0.06)QNS(0.27)ES(0.405)GEKNEGS(0.195)ES(0.07)APEGQAQQR;NYQQNY(0.036)QNS(0.158)ES(0.606)GEKNEGS(0.158)ES(0.043)APEGQAQQR 66.545 0.00031744 104558000 1459.71 1400.59 1286 1629.31 1328.87 1213.93 1086.6 1583.69 943.36 1141.89 TRUE FALSE 1335.553999 1309.411336 1198.709903 1754.799739 1275.938294 1282.661668 1014.114897 1569.843965 1041.425648 1283.355954 1.040673085 1.020302538 0.934043201 1.367352318 0.994220107 0.999459007 0.790205471 1.223233477 0.811486201 1 10.32570566 -6.498565962 24.97206731 0.971126079 1.087689458 0.132802352 0.152309481 1680.943858 1726527.261 0.046409292 0.052352894 3.17E-07 6.498565962 0.116563379 NYQQNYQNSES(ph)GEKNEGSESAPEGQAQQR ddPTM_A459_MK2206_30min_R2 4 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 H0Y449;P67809;C9J5V9 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 NY(0.001)QQNY(0.07)QNS(0.24)ES(0.651)GEKNEGS(0.027)ES(0.011)APEGQAQQR;NYQQNY(0.039)QNS(0.258)ES(0.693)GEKNEGS(0.008)ES(0.003)APEGQAQQR;NYQQNYQNS(0.203)ES(0.754)GEKNEGS(0.033)ES(0.01)APEGQAQQR;NYQQNY(0.005)QNS(0.132)ES(0.583)GEKNEGS(0.213)ES(0.066)APEGQAQQR 95.052 1.06E-07 251437300 51913.7 60065.2 50857.6 58950.1 50407.5 39378.2 67576 48253.8 38961.5 60407.5 TRUE FALSE 55888.25279 57082.44951 52553.167 54133.68826 48428.24827 40876.76499 58703.19003 54560.73734 42350.30084 58436.40822 0.956394386 0.97683022 0.899322333 0.926369192 0.82873417 0.699508513 1.004565335 0.93367712 0.72472457 1 15.83457989 -5.643855246 1.6945792 0.863788766 0.965378994 0.125077696 0.097024563 0.795540717 4.554294587 0.030490017 0.07522505 2.27E-06 5.643855246 0.101590228 NYQQNYQNSESGEKNEGS(ph)ESAPEGQAQQR ddPTM_A459_MK2206_30min_R1 1 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 H0Y449;P67809;C9J5V9 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNY(0.004)QNS(0.06)ES(0.184)GEKNEGS(0.567)ES(0.184)APEGQAQQR 116.44 8.01E-14 5660300 180.42 330.37 211.99 254.98 0 176.68 147.49 197.59 67.423 124.39 TRUE FALSE 165.0743316 308.862853 197.6007094 274.6186038 0 186.6834689 137.6512112 195.8624915 74.43186213 139.8003723 1.180786066 2.209313522 1.413449093 1.964362464 0 1.335357452 0.984626929 1.401015521 0.532415336 1 7.127224392 -6.217558551 24.99984419 0.924061143 1.709035563 0.430581397 0.457739089 446.9838368 254656.0535 0.12822371 0.165535141 6.06E-07 6.217558551 0.78497442 NYQQNYQNSESGEKNEGS(ph)ESAPEGQAQQR ddPTM_A459_MK2206_30min_R2 3 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 H0Y449;P67809;C9J5V9 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNYQNS(0.024)ES(0.065)GEKNEGS(0.672)ES(0.239)APEGQAQQR;NYQQNY(0.001)QNS(0.009)ES(0.034)GEKNEGS(0.784)ES(0.173)APEGQAQQR;NYQQNY(0.001)QNS(0.005)ES(0.004)GEKNEGS(0.495)ES(0.495)APEGQAQQR 88.541 1.63E-06 42276000 13914.02 16677.9 18146.23 19184.4 17284.58 13164.06 18123.64 16240.54 15487.5 19427.04 TRUE FALSE 14979.28807 15849.69974 18751.21625 17616.97315 16605.90054 13665.02753 15743.9843 18363.23434 16834.57476 18793.13728 0.7970616 0.843377 0.997769344 0.937415233 0.883615136 0.727128596 0.837751785 0.977124472 0.895783099 1 14.19791831 -7.761979306 24.99997581 0.95234035 0.863910051 0.266191264 0.073537598 24.35725361 1127595.505 0.041314972 0.021739915 1.73E-08 7.761979306 -0.0884303 NYQQNYQNSESGEKNEGSES(ph)APEGQAQQR ddPTM_A459_MK2206_30min_R1 1 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 H0Y449;P67809;C9J5V9 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNY(0.014)QNS(0.047)ES(0.154)GEKNEGS(0.35)ES(0.435)APEGQAQQR 59.661 0.0021609 219360000 304.87 387.27 248.94 430.22 265.75 154.77 331.19 480.82 167.95 219.05 TRUE FALSE 278.9392056 362.0586526 232.0426464 463.3556189 255.1646148 163.5329437 309.0969194 476.6162414 185.4090035 246.1875677 1.133035304 1.470661804 0.942544128 1.882124362 1.036464258 0.664261584 1.255534234 1.935988262 0.753120904 1 7.943614099 NYQSQADIPIRS(ph)PFGIVK ddPTM_A459_MK2206_30min_R1 1 NYQSQADIPIRSPFGIVK 18 1 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4 Q14966-3 ZNF638 Zinc finger protein 638 1 NYQSQADIPIRS(1)PFGIVK 103.4 0.0011362 20531000 3986.4 3751.7 2895.8 3341.1 2656.8 2604.2 2771.9 2291.2 2666.2 2148.4 TRUE FALSE 3647.335747 3507.463648 2699.241164 3598.432101 2550.97403 2751.647553 2586.991609 2271.16828 2943.361031 2414.560012 1.510559162 1.452630554 1.117901875 1.490305515 1.056496429 1.139606198 1.071413258 0.940613722 1.219005126 1 11.23754461 -4.355653483 0.359080323 1.015626641 2.07836437 0.593323376 0.127495212 5.870367395 0.478291954 0.112008926 2.867958732 4.41E-05 4.355653483 1.062737729 NYQSQADIPIRS(ph)PFGIVK ddPTM_A459_MK2206_30min_R2 2 NYQSQADIPIRSPFGIVK 18 1 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4 Q14966-3 ZNF638 Zinc finger protein 638 1 NY(0.001)QS(0.023)QADIPIRS(0.976)PFGIVK;NY(0.001)QS(0.004)QADIPIRS(0.995)PFGIVK 63.462 0.020966 26491000 118502 115744 104404 113214 100515 88179 105508 90710 70291 90386 TRUE FALSE 127574.6042 109996.3213 107884.7773 103964.054 96568.27605 91534.71363 91654.67286 102566.1085 76404.78412 87436.71222 1.459050792 1.25801072 1.233861321 1.189020623 1.104436267 1.046868201 1.048240156 1.173032538 0.873829564 1 16.41595153 -1.522878745 0.292670724 0.989007344 4.699610649 0.800405359 0.068750322 22.63445453 0.321628946 0.069720297 43.60043897 0.03 1.522878745 3.710603305 NYSEVIEVDES(ph)DVEEDIFPTTSK ddPTM_A459_MK2206_30min_R1 1 NYSEVIEVDESDVEEDIFPTTSK 23 0 F8W7U8;P49959-2;P49959;P49959-3 F8W7U8 MRE11A Double-strand break repair protein MRE11A 1 NYSEVIEVDES(1)DVEEDIFPTTSK 87.61 0.00015162 5508900 2275.7 2210.6 2232.9 1982.2 2612.4 2021 2506 2283 2264.9 2073.6 TRUE FALSE 2082.139765 2066.689538 2081.336969 2134.869387 2508.342576 2135.427273 2338.829312 2263.039972 2500.34446 2330.493223 0.893433091 0.886803496 0.893088617 0.916059041 1.07631404 0.916298427 1.003576964 0.971056234 1.072882099 1 11.1864196 -6.073065625 7.559516034 1.000522626 0.892859539 0.603534147 0.043583827 0.198098673 18.29520256 0.012396267 0.016100531 8.45E-07 6.073065625 -0.107663087 NYT(ph)NSPEESSK ddPTM_A459_MK2206_30min_R2 1 NYTNSPEESSK 11 0 J3QQU0;A0A3B3ITH3;Q9P2X3-2;Q9P2X3 J3QQU0 IMPACT Protein IMPACT 1 NYT(0.826)NS(0.136)PEES(0.012)S(0.026)K 151.3 0.0013993 5475500 64860 65774 71132 72072 69669 52862 76297 57352 56427 71780 TRUE FALSE 69825.73147 62507.7588 73503.50538 66183.48705 66933.445 54873.70045 66279.11225 64848.10332 61334.91846 69437.82448 1.005586393 0.90019754 1.058551387 0.953133073 0.963933497 0.79025662 0.954510207 0.933901714 0.883307029 1 16.08343413 -6.548719387 24.99997081 0.907140485 0.976763874 0.204646757 0.063050431 338.0496406 327049.488 0.020043176 0.020043847 2.83E-07 6.548719387 0.069623389 NYTEDIFPVT(ph)PPELEETIRDEK ddPTM_A459_MK2206_30min_R1 2 NYTEDIFPVTPPELEETIRDEK 22 1 Q5T3J3;Q5T3J3-2 Q5T3J3 LRIF1 Ligand-dependent nuclear receptor-interacting factor 1 1 NYTEDIFPVT(0.999)PPELEETIRDEK;NYTEDIFPVT(1)PPELEETIRDEK 99.569 0.00020567 5468300 1910.4 2106.12 2371.5 2190.9 2021.05 1537.86 1751.14 1749.94 1612.23 1438.8 TRUE FALSE 1747.910448 1969.011205 2210.529187 2359.643498 1940.547299 1624.932304 1634.324646 1734.640459 1779.827078 1617.049406 1.080925815 1.2176568 1.367014006 1.459227831 1.200054427 1.004874865 1.010683186 1.072719518 1.100663388 1 10.65914804 -6.606933433 4.727794589 1.042097683 1.28801102 0.590180469 0.096223719 0.161510867 6.473808288 0.035302829 0.035379392 2.47E-07 6.606933433 0.245913337 NYTNS(ph)PEESSK ddPTM_A459_MK2206_30min_R2 1 NYTNSPEESSK 11 0 J3QQU0;A0A3B3ITH3;Q9P2X3-2;Q9P2X3 J3QQU0 IMPACT Protein IMPACT 1 NYT(0.005)NS(0.994)PEESSK 84.297 0.036481 6241500 27979 31257 28798 36849 31336 30918 39535 28564 27881 36412 TRUE FALSE 30121.09375 29704.82283 29758.11095 33838.31883 30105.59119 32094.60616 34344.00701 32297.41287 30306.03898 35223.87942 0.855132775 0.843314914 0.844827754 0.960664168 0.85469266 0.911160459 0.975020571 0.916918108 0.860383339 1 15.10426619 -1.522878746 0.065982243 1.096198029 0.466165343 0.425811651 0.042570958 285.1857439 1.401682725 2.48406672 16.8916966 0.03 1.522878746 -0.630032686 NYTNSPEES(ph)SK ddPTM_A459_MK2206_30min_R1 1 NYTNSPEESSK 11 0 J3QQU0;A0A3B3ITH3;Q9P2X3-2;Q9P2X3 J3QQU0 IMPACT Protein IMPACT 1 NYT(0.039)NS(0.433)PEES(0.527)S(0.001)K 188.48 1.95E-05 5841900 2815.7 2518.9 2815.8 2321 2245.4 1947.8 2604.4 2317.6 2051.7 2507 TRUE FALSE 2576.209929 2354.919152 2624.671341 2499.763822 2155.960963 2058.082753 2430.665228 2297.337468 2264.981557 2817.586087 0.914332286 0.83579315 0.931531907 0.887200513 0.765180157 0.730441835 0.862676473 0.81535662 0.803873063 1 11.46024397 -6.158014933 8.708734984 0.817116038 0.89143869 0.142344589 0.07151588 0.550315724 42.32969549 0.020301164 0.026250138 6.95E-07 6.158014933 0.074322652 NYYEQWGK ddPTM_A459_MK2206_30min_R1 1 NYYEQWGK 8 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 143.73 0.029542 38766000 4381.2 4815.6 4411.4 4487.1 4144.8 3601 4110.3 3250.5 3381 3355.7 FALSE TRUE 4008.555933 4502.103565 4111.966459 4832.697219 3979.703839 3804.885508 3836.109387 3222.081221 3732.467049 3771.42945 1.062874432 1.193739303 1.090293883 1.281396691 1.055224257 1.008870922 1.017149979 0.854339519 0.989669063 1 11.88089572 -6.69403721 2.258300308 0.959735053 1.155419882 0.591492842 0.070864157 0.200495281 2.095471203 0.026246324 0.025280951 2.02E-07 6.69403721 0.195684829 PAAMISQPPT(ph)PPTGQPVR ddPTM_A459_MK2206_30min_R2 3 PAAMISQPPTPPTGQPVR 18 0 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 PAAMIS(0.056)QPPT(0.862)PPT(0.083)GQPVR;PAAMIS(0.01)QPPT(0.964)PPT(0.027)GQPVR;PAAMISQPPT(0.87)PPT(0.13)GQPVR 172.99 9.61E-08 14932100 56060 35013 36242.6 38323 30830.1 27771.5 45576 35001.3 24886.5 54035 TRUE FALSE 60351.9967 33274.30533 37450.9102 35191.88831 29619.55537 28828.36389 39591.81645 39576.09009 27051.08279 52271.84238 1.154579482 0.636562704 0.716464324 0.673247521 0.566644565 0.551508472 0.757421485 0.757120627 0.517507736 1 15.67374639 -4.758766279 24.99465953 0.673494957 1.154580124 0.528922525 0.132091874 53.39863935 499202.5772 0.030829541 0.20582295 1.74E-05 4.758766279 0.481085167 PAAMISQPPT(ph)PPTGQPVREDAK ddPTM_A459_MK2206_30min_R2 1 PAAMISQPPTPPTGQPVREDAK 22 1 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 PAAMIS(0.02)QPPT(0.964)PPT(0.016)GQPVREDAK 63.302 0.012704 5994400 18590 22283 21803 24568 20435 12713 20932 15930 19693 28003 TRUE FALSE 20013.26469 21176.45862 22529.90114 22560.71581 19632.61922 13196.80212 18183.60326 18012.1057 21405.86154 27089.2644 0.738789522 0.781728817 0.831691138 0.832828661 0.724737997 0.487159855 0.671247583 0.664916752 0.790197224 1 14.7254336 -8.61225041 5.160935653 0.999987143 0.717950019 0.450493357 0.094319046 0.750372528 41.95056476 0.103408893 0.026874675 2.44E-09 8.61225041 -0.282037124 PAAMISQPPTPPT(ph)GQPVR ddPTM_A459_MK2206_30min_R2 1 PAAMISQPPTPPTGQPVR 18 0 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 PAAMIS(0.001)QPPT(0.381)PPT(0.618)GQPVR 108.97 0.010496 0 14083 8600.1 7381.4 8847.4 6979.4 7598.1 10953 7906.8 7246.3 12663 TRUE FALSE 15161.20531 8173.03154 7627.492192 8124.539119 6705.353687 7887.25102 9514.857943 8940.245908 7876.570076 12249.80735 1.237668877 0.667196741 0.622662216 0.663238114 0.54738442 0.643867352 0.776735313 0.72982747 0.642995425 1 13.58047144 -10.21970234 16.11081566 1 0.713107041 0.167464211 0.181505356 0 0 0.174037186 0.042210218 6.03E-11 10.21970234 -0.286892958 PAANRAS(ph)GEWDSGTENR ddPTM_A459_MK2206_30min_R1 1 PAANRASGEWDSGTENR 17 1 A0A0U1RQE4;Q5HYK7-2;Q5HYK7;Q5HYK7-3;A0A0U1RQN2;A0A494C1M0 A0A0U1RQE4;A0A494C1M0 SH3D19 SH3 domain-containing protein 19 1 PAANRAS(0.999)GEWDS(0.001)GTENR 97.129 0.046565 0 4204.5 4556.2 5190.2 2999.9 4708.3 3048.5 4480.7 4264.9 5219.6 6457.3 TRUE FALSE 3846.885196 4259.590552 4837.903685 3230.952818 4520.758441 3221.103436 4181.800678 4227.612429 5762.196099 7257.279074 0.530072656 0.586940437 0.666627759 0.445201677 0.622927463 0.443844505 0.576221561 0.582534086 0.793988496 1 12.82521303 -8.475471758 1.978144102 0.999046369 0.552665391 0.825613896 0.066120854 0.120272511 1.04460112 0.061007219 0.017175657 3.35E-09 8.475471758 -0.446380977 PAAS(ph)PAVGEK ddPTM_A459_MK2206_30min_R1 1 PAASPAVGEK 10 0 F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8;Q8N2M8-4 F5H0Q6 CLASRP CLK4-associating serine/arginine rich protein 1 PAAS(1)PAVGEK 105.2 0.012654 10275000 5495 6834.2 5777.5 4534.5 4190.4 4496.6 5317.5 4138.1 5714.7 7214.8 TRUE FALSE 5027.621395 6389.292338 5385.339397 4883.747976 4023.487495 4751.193606 4962.779277 4101.921028 6308.763515 8108.623893 0.620033863 0.787962597 0.66414961 0.602290603 0.496198559 0.585943271 0.612037177 0.505871413 0.77803134 1 12.98524138 -8.548575992 4.824398763 0.999824755 0.613178389 0.715505762 0.077099939 0.104178279 9.588420311 0.081701569 0.021271383 2.83E-09 8.548575992 -0.386646366 PAAS(ph)PAVGEK ddPTM_A459_MK2206_30min_R2 2 PAASPAVGEK 10 0 F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8;Q8N2M8-4 F5H0Q6 CLASRP CLK4-associating serine/arginine rich protein 1 PAAS(1)PAVGEK;PAAS(1)PAVGEK 107.34 0.011348 18063300 211662 148341 150273 142431 149015 109657 168128 135294 108436 184836 TRUE FALSE 227867.0055 140974.6016 155283.0268 130793.9317 143163.9224 113830.074 146052.5916 152977.3903 117867.5673 178804.8165 1.274389639 0.788427317 0.86844991 0.73148998 0.80067151 0.636616374 0.816826943 0.855555199 0.659196825 1 17.44802607 -4.761404017 10.17447368 0.786801977 1.276214596 0.673535239 0.099919415 0.039231338 93.69969825 0.023279393 0.131624908 1.73E-05 4.761404017 0.489412619 PAAS(ph)PLTSLR ddPTM_A459_MK2206_30min_R2 2 PAASPLTSLR 10 0 Q92615 Q92615 LARP4B La-related protein 4B 1 PAAS(0.843)PLT(0.153)S(0.004)LR;PAAS(0.987)PLT(0.013)SLR 152.69 0.00062396 9473100 61355 25806 34659 20471.3 20086.6 19649.7 28382 21913 19042.6 39960 TRUE FALSE 66052.38597 24524.51157 35814.51376 18798.72931 19297.89916 20397.4831 24655.40931 24777.10434 20698.89093 38656.10847 1.708717938 0.634427844 0.926490409 0.486306823 0.499219914 0.527665197 0.637814055 0.6409622 0.535462356 1 15.23840879 -2.979590899 1.463244968 0.617064275 200 0.756897429 0.176232441 114.5548417 1.762584066 0.046948956 75342.2026 0.001048115 2.979590899 199.3829357 PAAS(ph)PRPR ddPTM_A459_MK2206_30min_R2 1 PAASPRPR 8 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 PAAS(1)PRPR 83.998 0.020649 7302800 15645 8318.6 11098 10568 9808.4 6275.6 12184 20824 9549.8 18937 TRUE FALSE 16842.79323 7905.51042 11468.00178 9704.560595 9423.272933 6514.422356 10584.22616 23545.7683 10380.42434 18319.08724 0.919412251 0.431544995 0.62601382 0.529751317 0.514396422 0.355608457 0.577770389 1.2853134 0.566645281 1 14.16106 -7.621938114 11.18085723 0.944034217 0.548590111 0.404632532 0.214012021 0.369969758 39.09515292 0.094217599 0.054348661 2.39E-08 7.621938114 -0.395444106 PAAS(ph)SPETPSAGQQEAK ddPTM_A459_MK2206_30min_R1 1 PAASSPETPSAGQQEAK 17 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 PAAS(0.609)S(0.391)PETPSAGQQEAK 201.3 4.53E-08 3128000 1382.4 1521.1 1514.9 1292.8 1044.8 1181.9 1621.3 1301.9 2141.6 2334.5 TRUE FALSE 1264.819621 1422.076114 1412.072809 1392.37168 1003.183404 1248.818157 1513.146035 1290.517626 2364.226984 2623.715485 0.482071943 0.542008507 0.538195859 0.530686993 0.382352206 0.475973162 0.576718796 0.491866452 0.901098842 1 11.35739557 -8.328346514 3.608448694 0.993990291 0.501830195 0.924775112 0.051378769 0.059027156 1.427388552 0.051141388 0.013906411 4.70E-09 8.328346514 -0.492160096 PAAS(ph)SPETPSAGQQEAK ddPTM_A459_MK2206_30min_R2 1 PAASSPETPSAGQQEAK 17 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 PAAS(0.599)S(0.401)PETPSAGQQEAK 135.61 0.00051606 9122300 58943 40174 39801 42213 31820 37808 48713 34359 31255 47762 TRUE FALSE 63455.7214 38179.01758 41127.94548 38764.06287 30570.58692 39246.80993 42316.92459 38849.83927 33973.5034 46203.52985 1.373395531 0.826322528 0.890147259 0.838984878 0.661650463 0.849433151 0.915880772 0.840841369 0.735301037 1 15.49571545 -4.760976149 24.99997605 0.833519411 1.37339614 0.768020529 0.087909164 5.116707447 275850.9837 0.02164088 0.123913334 1.73E-05 4.760976149 0.539876729 PAASS(ph)PETPSAGQQEAK ddPTM_A459_MK2206_30min_R1 1 PAASSPETPSAGQQEAK 17 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 PAAS(0.12)S(0.877)PET(0.003)PSAGQQEAK 228.9 2.63E-16 9779500 1135.6 1802.7 1478 997.48 991.29 1233.3 1232.4 920.62 1371 1878 TRUE FALSE 1039.011257 1685.343902 1377.677478 1074.306082 951.8048202 1303.12838 1150.188845 912.5711164 1513.520356 2110.660818 0.492268226 0.798491111 0.652723292 0.508990394 0.450951101 0.617403028 0.544942529 0.43236275 0.717083647 1 11.04347904 -8.56049889 7.478882727 0.999995433 0.569132821 0.632320859 0.102329665 0.36787647 72.13916609 0.10383792 0.026851537 2.75E-09 8.56049889 -0.430862611 PAASS(ph)PETPSAGQQEAK ddPTM_A459_MK2206_30min_R2 1 PAASSPETPSAGQQEAK 17 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 PAAS(0.066)S(0.934)PETPSAGQQEAK 113.67 0.0017927 9635400 56309 36127 45735 39324 35706 28499 43101 40575 25811 59216 TRUE FALSE 60620.06033 34332.98571 47259.78207 36111.10341 34304.00303 29583.54942 37441.78693 45878.29181 28055.99412 57283.78677 1.058241149 0.599349094 0.825011486 0.6303896 0.598843145 0.516438439 0.653619271 0.800894885 0.489771988 1 15.80583925 -4.75528441 24.97949725 0.667754697 1.058241798 0.369426903 0.147797677 205.4997042 833924.6472 0.034492528 0.310088507 1.76E-05 4.75528441 0.390487101 PAEKPAETPVATS(ph)PTATDSTSGDSSR ddPTM_A459_MK2206_30min_R1 1 PAEKPAETPVATSPTATDSTSGDSSR 26 1 P54727;P54727-2;H0Y579 P54727 RAD23B UV excision repair protein RAD23 homolog B 1 PAEKPAETPVAT(0.131)S(0.377)PT(0.377)AT(0.095)DS(0.006)T(0.006)S(0.006)GDSSR 115.05 4.29E-09 8389700 1635.9 1637.1 1507.5 1675.6 1139.8 1042.1 1255.3 1332.6 1439 2096.6 TRUE FALSE 1496.758115 1530.524492 1405.1751 1804.655002 1094.399352 1101.102801 1171.561227 1320.949219 1588.5892 2356.342637 0.635203935 0.64953393 0.59633734 0.765871217 0.464448309 0.467293162 0.497194767 0.560593013 0.674175807 1 11.20233362 -8.700824535 2.911928781 0.999891516 0.579000489 0.676095527 0.087278485 0.540207148 7.715116475 0.092160412 0.024565459 1.99E-09 8.700824535 -0.420891027 PAGPAGDEPAES(ph)PSETPGPR ddPTM_A459_MK2206_30min_R2 1 PAGPAGDEPAESPSETPGPR 20 0 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 PAGPAGDEPAES(0.994)PS(0.006)ETPGPR 277.07 2.24E-132 0 12250 8259.1 7876.2 7385.6 5550.2 5698.8 9642.9 8175.9 5472.8 12145 TRUE FALSE 13187.86942 7848.965104 8138.788577 6782.172855 5332.27126 5915.671827 8376.775647 9244.518202 5948.814251 11748.70964 1.122495135 0.668070396 0.692738932 0.577269595 0.453860162 0.503516727 0.712995376 0.786853917 0.506337669 1 13.52021469 -10.02406606 17.96455536 0.999999997 0.660815258 0.227843562 0.182001379 0 0 0.179770286 0.043600699 9.46E-11 10.02406606 -0.339184739 PAMPQDSVPS(ph)PR ddPTM_A459_MK2206_30min_R1 1 PAMPQDSVPSPR 12 0 P53396 P53396 ACLY ATP-citrate synthase 1 PAMPQDSVPS(1)PR 111.66 0.006704 7315000 1692.3 1891.2 1990 1579.2 1462.9 1310 1703.1 1504.7 1717.1 1985.3 TRUE FALSE 1548.360998 1768.082536 1854.924344 1700.830258 1404.629595 1384.171068 1589.489306 1491.544567 1895.59869 2231.253952 0.693942075 0.79241654 0.831337169 0.762275516 0.629524754 0.620355682 0.712374898 0.668478173 0.849566535 1 11.12363901 -8.532634712 3.612634668 0.999495835 0.716641935 0.66678074 0.064057151 0.13830208 5.084755748 0.070483227 0.018567729 2.93E-09 8.532634712 -0.282853901 PAMPQDSVPS(ph)PR ddPTM_A459_MK2206_30min_R2 4 PAMPQDSVPSPR 12 0 P53396 P53396 ACLY ATP-citrate synthase 1 PAMPQDSVPS(1)PR;PAMPQDS(0.001)VPS(0.999)PR;PAMPQDS(0.002)VPS(0.998)PR;PAMPQDS(0.001)VPS(0.999)PR 109.95 0.0074222 75259100 154110 159207 131637 160452 137107 116327 149970 133562 109400 144485 TRUE FALSE 165908.7801 151301.0119 136025.7119 147342.5583 131723.4903 120753.9055 130278.7589 151019.012 118915.4143 139770.4663 1.187008847 1.082496295 0.973207828 1.054175194 0.942427208 0.863944356 0.932090751 1.080478702 0.85079071 1 17.09270002 -4.239736493 0.758413915 0.94968483 1.578098608 0.547436079 0.067439824 4.325837429 1.062261606 0.026012157 2.792964772 5.76E-05 4.239736493 0.628413777 PAPAVGEAEDKENQQATSGPNQPS(ph)VR ddPTM_A459_MK2206_30min_R2 2 PAPAVGEAEDKENQQATSGPNQPSVR 26 1 P16989-2;P16989;P16989-3 P16989-2 YBX3 Y-box-binding protein 3 1 PAPAVGEAEDKENQQAT(0.001)S(0.003)GPNQPS(0.996)VR;PAPAVGEAEDKENQQAT(0.009)S(0.046)GPNQPS(0.945)VR 116.65 4.28E-09 21408000 60376 72334 57083 53154 54799 40787 93057 56329 55134 61417 TRUE FALSE 64998.43298 68741.99874 58986.11873 48811.14817 52647.31592 42339.17787 80838.50412 63691.39371 59929.45566 59412.96832 1.094010867 1.157020103 0.992815548 0.821557137 0.886124989 0.71262519 1.360620525 1.072011642 1.008693175 1 15.85849025 -9.317181737 14.35584153 1.000000009 1.009388607 0.000253125 0.171773032 0 0 0.176494584 0.042806224 4.82E-10 9.317181737 0.009388598 PAPPPQS(ph)QSPEVEQLGR ddPTM_A459_MK2206_30min_R2 1 PAPPPQSQSPEVEQLGR 17 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 PAPPPQS(0.5)QS(0.5)PEVEQLGR 114.52 0.0017043 11928000 7194.5 1788.4 3339.7 3249.6 6297.3 2241.9 2411.6 3173.9 1785 6279.7 TRUE FALSE 7745.316452 1699.590657 3451.043931 2984.097285 6050.036361 2327.217075 2094.954023 3588.739628 1940.256073 6074.793903 1.274992465 0.279777501 0.568092348 0.491226095 0.995924546 0.383093997 0.344860098 0.590759075 0.319394551 1 12.56861975 -10.93892577 4.991123878 1.000522816 0.570532226 0.144492791 0.302918609 0.001681739 0.000196761 0.279895148 0.067804485 1.15E-11 10.93892577 -0.42999059 PAPPPQSQS(ph)PEVEQLGR ddPTM_A459_MK2206_30min_R2 3 PAPPPQSQSPEVEQLGR 17 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 PAPPPQS(0.041)QS(0.959)PEVEQLGR;PAPPPQS(0.017)QS(0.983)PEVEQLGR;PAPPPQS(0.21)QS(0.79)PEVEQLGR 187.56 6.46E-08 26950400 37849 25287.9 22752.6 25079 25366 18716.6 30872.6 21833.2 15532.8 34528.2 TRUE FALSE 40746.74854 24032.13966 23511.16033 23029.96548 24370.00339 19428.87333 26818.99054 24686.8742 16883.81487 33401.54766 1.219906004 0.7194918 0.703894339 0.689487976 0.729607012 0.581675841 0.802926583 0.739093723 0.505480017 1 15.02762733 -4.761395335 6.797415617 0.707398757 1.232165409 0.594649104 0.123753539 0.071839072 17.65446649 0.028310096 0.174187982 1.73E-05 4.761395335 0.524766652 PAPPQEES(ph)PSSEAK ddPTM_A459_MK2206_30min_R1 2 PAPPQEESPSSEAK 14 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 PAPPQEES(0.537)PS(0.367)S(0.096)EAK;PAPPQEES(0.435)PS(0.435)S(0.129)EAK 193.54 0.0001161 36106000 5365.5 5947.5 5864.2 4835.2 3583.7 3845.8 5177.4 3707.3 5687.5 5938.8 TRUE FALSE 4909.13605 5560.316669 5466.154443 5207.607942 3440.95364 4063.545873 4832.025093 3674.887467 6278.735978 6674.54338 0.735501407 0.83306323 0.818955565 0.780219357 0.515533939 0.608812565 0.723948414 0.550582603 0.940698954 1 12.70445343 -8.410331585 5.913507506 0.997488433 0.699914531 0.536801904 0.102539067 0.185080344 7.794052772 0.108533503 0.028154192 3.89E-09 8.410331585 -0.297573902 PAPPQEES(ph)PSSEAK ddPTM_A459_MK2206_30min_R2 1 PAPPQEESPSSEAK 14 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 PAPPQEES(0.744)PS(0.225)S(0.03)EAK 139.21 0.00057249 25932000 45021 33448 28042 29288 22374 16899 41907 31559 19722 40707 TRUE FALSE 48467.84238 31787.02096 28976.90628 26895.07671 21495.48434 17542.10329 36404.56056 35683.86966 21437.38391 39378.73392 1.230812612 0.807212873 0.735851649 0.6829848 0.545865298 0.44547149 0.924472601 0.906171075 0.544389872 1 15.26512911 -4.685346082 2.266073626 0.709164291 1.45701083 0.436213896 0.171667566 0.84667807 4.070318612 0.046263459 1.403167941 2.06E-05 4.685346082 0.74784654 PAPPQEESPS(ph)SEAK ddPTM_A459_MK2206_30min_R1 2 PAPPQEESPSSEAK 14 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 PAPPQEES(0.288)PS(0.565)S(0.147)EAK;PAPPQEES(0.244)PS(0.582)S(0.174)EAK 200.63 6.80E-05 31714000 3995.5 5040.9 4525.3 3592.7 3043.1 2768.3 4228.4 3327.7 4792.6 5567.6 TRUE FALSE 3655.661744 4712.736494 4218.135244 3869.410377 2921.886883 2925.038754 3946.331151 3298.60627 5290.80792 6257.356321 0.584218247 0.753151371 0.674108206 0.618377822 0.466952293 0.467456 0.630670678 0.527156534 0.845534064 1 12.61133754 -8.452176071 3.609881594 0.99754087 0.593141229 0.723253877 0.084681663 0.120822598 3.082952916 0.090963477 0.024023735 3.53E-09 8.452176071 -0.404399642 PAPPQEESPS(ph)SEAK ddPTM_A459_MK2206_30min_R2 2 PAPPQEESPSSEAK 14 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 PAPPQEES(0.287)PS(0.629)S(0.083)EAK;PAPPQEES(0.263)PS(0.579)S(0.158)EAK 134.37 0.00064993 74621000 104301 72862 80753 68003 64374 46549 89974 78182 47053 101599 TRUE FALSE 112286.3648 69243.77903 83445.26472 62446.93737 61846.35331 48320.45481 78160.30572 88400.65584 51145.58489 98283.83295 1.142470347 0.704528679 0.849023305 0.635373443 0.629262733 0.491641945 0.795250891 0.899442494 0.520386551 1 16.5846665 PARPPS(ph)PTEQEGAVPR ddPTM_A459_MK2206_30min_R2 1 PARPPSPTEQEGAVPR 16 1 Q8N8E2;Q8N8E2-2 Q8N8E2 ZNF513 Zinc finger protein 513 1 PARPPS(0.971)PT(0.029)EQEGAVPR 69.261 0.025117 6036300 25346 35579 34520 35678 29726 31853 31590 31856 33064 28197 TRUE FALSE 27286.50925 33812.1986 35670.87957 32762.99327 28558.80788 33065.18824 27442.19505 36019.68858 35939.84695 27276.9342 1.000351031 1.239589404 1.307730528 1.201124475 1.046994786 1.212203248 1.00605863 1.320518219 1.317591145 1 14.73539388 -7.801579192 24.99999073 1.239290773 1.155760814 0.039378045 0.127963941 439.3190911 273612.4477 0.0688137 0.033057743 1.58E-08 7.801579192 -0.083529959 PAS(ph)PDRFAVSAEAENK ddPTM_A459_MK2206_30min_R1 3 PASPDRFAVSAEAENK 16 1 O15037;G3V331 O15037 KHNYN Protein KHNYN 1 PAS(0.629)PDRFAVS(0.371)AEAENK;PAS(1)PDRFAVSAEAENK;PAS(0.542)PDRFAVS(0.458)AEAENK 124.46 0.0061035 29496400 4818.9 5885.3 5146.3 4425.2 3130.9 3536.29 4063.09 3678.8 4965.79 5783.1 TRUE FALSE 4409.02725 5502.1659 4796.983494 4766.029671 3006.189623 3736.511684 3792.04868 3646.636639 5482.001641 6499.554088 0.678358421 0.846545136 0.738048092 0.733285639 0.462522441 0.57488739 0.583432129 0.561059511 0.84344273 1 12.66612503 -8.496244164 4.214819647 0.999041463 0.650044795 0.550858458 0.103817375 0.149663627 6.857386823 0.113216349 0.029622345 3.19E-09 8.496244164 -0.348996668 PAS(ph)PDRFAVSAEAENK ddPTM_A459_MK2206_30min_R2 2 PASPDRFAVSAEAENK 16 1 O15037;G3V331 O15037 KHNYN Protein KHNYN 1 PAS(1)PDRFAVSAEAENK;PAS(0.935)PDRFAVS(0.065)AEAENK 116.61 0.0090538 13987000 46875 41421 44969 42133 39165 28489 44583 36101 30610 46120 TRUE FALSE 50463.78604 39364.09337 46468.24402 38690.59912 37627.18531 29573.16886 38729.19855 40819.52465 33272.40247 44615.10818 1.131091868 0.882304111 1.041536061 0.867208457 0.843373172 0.662850995 0.868073622 0.914926049 0.745765366 1 15.44524472 -5.873136553 4.44671774 0.829639998 1.004421033 0.376102037 0.102718975 0.226969217 7.750281023 0.028618046 0.043925055 1.34E-06 5.873136553 0.174781035 PAS(ph)PSLQLLPWR ddPTM_A459_MK2206_30min_R2 1 PASPSLQLLPWR 12 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 PAS(0.815)PS(0.185)LQLLPWR 84.734 0.032223 11378000 20745 16988 18369 15335 9734.1 10410 12503 11173 7612.9 18477 TRUE FALSE 22333.25315 16144.40062 18981.41329 14082.08145 9351.890324 10806.15984 10861.34108 12633.34946 8275.056281 17874.097 1.249475884 0.90322888 1.061950894 0.787848552 0.523209107 0.604570952 0.60765817 0.706796515 0.462963599 1 14.12558274 -5.896107438 3.173772756 0.631900237 1.059088765 0.587415621 0.156638379 0.161051768 3.230741978 0.043115322 0.068077406 1.27E-06 5.896107438 0.427188528 PAS(ph)PVAGSPK ddPTM_A459_MK2206_30min_R2 2 PASPVAGSPK 10 0 Q13057-2;K7EN91;Q13057 Q13057-2 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase 1 PAS(1)PVAGSPK;PAS(0.998)PVAGS(0.002)PK 90.434 0.029443 28404000 288920 171716 195599 187803 139094 115767 209152 170556 120340 247690 TRUE FALSE 311039.9373 163188.8331 202120.173 172458.8941 133632.4707 120172.5943 181690.0912 192848.2548 130806.9557 239607.8956 1.298120567 0.681066176 0.843545546 0.719754638 0.557713135 0.501538541 0.758280902 0.804849332 0.54592089 1 17.87031592 -4.7602946 24.9985469 0.700740265 1.29812128 0.595317202 0.144552802 19.45930675 424748.1267 0.035497102 0.212322595 1.74E-05 4.7602946 0.597381015 PASTSQPDPS(ph)PDR ddPTM_A459_MK2206_30min_R1 1 PASTSQPDPSPDR 13 0 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 PASTSQPDPS(1)PDR 160.84 1.56E-05 0 1784.1 2045.9 1866.9 1638.7 1637.7 1921.2 2070.7 1899.5 1920.5 2153.2 TRUE FALSE 1632.352926 1912.711538 1740.180029 1764.912958 1572.466941 2029.976684 1932.567381 1882.892872 2120.142848 2419.954672 0.674538637 0.790391473 0.719096126 0.729316536 0.649791899 0.838849053 0.798596521 0.778069479 0.876108496 1 11.24076431 -8.580277765 0.496399928 1.009552191 0.717769578 0.750244907 0.048866765 0.575607121 0.341270172 0.060455194 0.028057748 2.63E-09 8.580277765 -0.291782613 PASTSQPDPS(ph)PDR ddPTM_A459_MK2206_30min_R2 1 PASTSQPDPSPDR 13 0 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 PASTSQPDPS(1)PDR 143.96 0.0010296 0 32273 27469 27453 30719 22497 22340 31979 31307 20663 39961 TRUE FALSE 34743.84569 26104.9294 28368.26932 28209.15943 21613.65474 23190.16435 27780.11889 35398.93239 22460.23039 38657.07584 0.898770663 0.675294984 0.733844159 0.729728227 0.559112511 0.599894427 0.718629598 0.915716764 0.581012141 1 15.23844489 -10.82515941 5.741303188 1.000028532 0.710830326 0.360997187 0.114755483 4.22E-05 5.13E-06 0.111816748 0.027116873 1.50E-11 10.82515941 -0.289198206 PASVDGSPVS(ph)PSTNR ddPTM_A459_MK2206_30min_R1 2 PASVDGSPVSPSTNR 15 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 PASVDGS(0.001)PVS(0.873)PS(0.098)T(0.028)NR;PASVDGS(0.024)PVS(0.872)PS(0.052)T(0.052)NR 139.49 0.00039334 21635000 5062.5 5468.9 5349.9 3811.1 4000.2 3601.6 4942.8 4087.7 5447.9 6888.1 TRUE FALSE 4631.907791 5112.873616 4986.763694 4104.631582 3840.863563 3805.51948 4613.074831 4051.96167 6014.228701 7741.449831 0.598325623 0.660454273 0.644164052 0.53021484 0.496142667 0.491577103 0.595892879 0.523411216 0.776886608 1 12.91838807 -8.524607431 3.051210297 0.999038093 0.56834612 0.856727099 0.05616033 0.09091934 2.124318358 0.061244524 0.016322404 2.99E-09 8.524607431 -0.430691973 PASVDGSPVS(ph)PSTNR ddPTM_A459_MK2206_30min_R2 2 PASVDGSPVSPSTNR 15 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 PASVDGS(0.026)PVS(0.97)PS(0.003)T(0.001)NR;PASVDGS(0.003)PVS(0.99)PS(0.007)TNR 202.32 1.31E-05 27868000 155323 112552 117699 114259 95395 76857 114556 93546 74290 116244 TRUE FALSE 167214.6483 106962.8313 121623.0259 104923.6742 91649.31298 79781.84699 99514.65959 105772.7834 80751.60991 112450.9678 1.487000526 0.951195294 1.081564955 0.933061549 0.815015778 0.709481195 0.884960455 0.940612477 0.718105068 1 16.77893655 -1.522878839 0.811133353 0.850188651 164.2628387 0.736273976 0.108037787 267.0543165 0.884988292 0.037919479 80272.80949 0.029999994 1.522878839 163.41265 PAT(ph)PGASSVEQLRK ddPTM_A459_MK2206_30min_R1 2 PATPGASSVEQLRK 14 1 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 1 PAT(0.999)PGASS(0.001)VEQLRK;PAT(0.997)PGAS(0.003)SVEQLRK 89.484 0.024286 80255000 13611.1 16777.4 15910.7 14117.7 9662.5 9908.4 12704.1 12577.6 14647.1 16017.1 TRUE FALSE 12453.40447 15685.18821 14830.72601 15205.0477 9277.622164 10469.40505 11856.63267 12467.63537 16169.71846 18001.41927 0.691801256 0.871330642 0.823864263 0.844658272 0.515382816 0.581587756 0.658649881 0.6925918 0.898246867 1 14.13582304 -8.42083288 3.295077078 0.996947253 0.711142113 0.454055313 0.107440406 0.236686191 4.775881242 0.116809574 0.031138496 3.79E-09 8.42083288 -0.28580514 PAT(ph)PGASSVEQLRK ddPTM_A459_MK2206_30min_R2 1 PATPGASSVEQLRK 14 1 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 1 PAT(1)PGASSVEQLRK 116.87 0.0032288 33290000 209800 217400 191220 205410 137230 125030 190770 125000 146810 267810 TRUE FALSE 225862.4493 206604.2321 197595.1794 188627.3459 131841.6607 129788.1043 165721.6698 141337.9292 159579.2684 259071.3816 0.871815512 0.797479949 0.762705545 0.728090246 0.508900905 0.500974301 0.639675709 0.545555932 0.615966408 1 17.98299013 -5.915114043 2.59950231 0.606607812 0.815540272 0.230485068 0.137122854 0.331591473 4.541166968 0.039195743 0.063025522 1.22E-06 5.915114043 0.208932461 PAT(ph)PHLLHHR ddPTM_A459_MK2206_30min_R2 2 PATPHLLHHR 10 0 Q9UPT8 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 PAT(1)PHLLHHR;PAT(1)PHLLHHR 122.51 0.0034751 5901500 21569.4 11242.5 18039.2 12791.1 6792.4 8594.9 13590.4 16785.7 10703.1 19885.8 TRUE FALSE 23220.76985 10684.2138 18640.61792 11746.02621 6525.696247 8921.984942 11805.96416 18979.64862 11634.03629 19236.92797 1.207093455 0.555401248 0.969001805 0.610597816 0.339227566 0.463794685 0.613713591 0.986625757 0.604776205 1 14.23159081 -10.31422386 14.11180789 1 0.693795848 0.106504581 0.253770359 0 0 0.249586271 0.060533562 4.85E-11 10.31422386 -0.306204152 PAT(ph)STPDLASHR ddPTM_A459_MK2206_30min_R1 1 PATSTPDLASHR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 PAT(0.366)S(0.366)T(0.269)PDLASHR 113.76 0.0078935 5875100 2302.8 2763.1 2575.2 2614.2 2419.8 1692.9 2192.3 2010.7 2032.9 2311.2 TRUE FALSE 2106.934768 2583.221688 2400.402599 2815.546137 2323.414242 1788.750535 2046.055667 1993.120662 2244.22723 2597.528905 0.811130442 0.994491989 0.924110063 1.083932553 0.894470987 0.688635469 0.787693128 0.767314142 0.863985469 1 11.34292409 -6.528973046 24.97541446 0.803388775 0.95862505 0.276635635 0.09847758 168.8366546 691913.174 0.031062053 0.03114116 2.96E-07 6.528973046 0.155236275 PAT(ph)STPDLASHR ddPTM_A459_MK2206_30min_R2 1 PATSTPDLASHR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 PAT(0.541)S(0.307)T(0.152)PDLASHR 103.76 0.014097 19847000 87029 97240 78862 88098 98065 75190 96087 66115 80285 87389 TRUE FALSE 93692.00715 92411.203 81491.21972 80900.11159 94214.47536 78051.40814 83470.66148 74756.45751 87268.04418 84537.50409 1.108289252 1.093138531 0.963965291 0.956973032 1.114469564 0.923275521 0.987380245 0.884299322 1.032299748 1 16.3673039 -5.243913413 10.29857496 0.980510546 1.100862941 0.391232716 0.058761369 0.47840177 271.1863797 0.014864054 0.037730457 5.70E-06 5.243913413 0.120352395 PATS(ph)TPDLASHR ddPTM_A459_MK2206_30min_R1 2 PATSTPDLASHR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 PAT(0.267)S(0.401)T(0.332)PDLASHR;PAT(0.059)S(0.568)T(0.373)PDLASHR 127.3 0.0017283 34542000 6852.9 8178 7434.2 7414 5946.1 5242 6215.7 6132.4 4995.7 5374.5 TRUE FALSE 6270.024869 7645.610714 6929.587217 7985.027565 5709.254246 5538.79751 5801.061994 6078.785073 5515.020892 6040.333635 1.038026249 1.265759671 1.147219282 1.32195141 0.945188559 0.916968804 0.960387678 1.00636578 0.913032495 1 12.56041252 -6.279945402 24.92871777 0.955477591 1.195132054 0.705013101 0.074856948 405.5137343 546249.8724 0.022034722 0.025032826 5.25E-07 6.279945402 0.239654463 PATS(ph)TPDLASHR ddPTM_A459_MK2206_30min_R2 1 PATSTPDLASHR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 PAT(0.14)S(0.514)T(0.346)PDLASHR 124.81 0.0019617 22009000 47383 48948 44395 44508 60177 47338 48738 45622 45392 59169 TRUE FALSE 51010.67891 46517.3135 45875.10714 40871.55403 57814.14861 49139.48076 42338.64206 51584.95204 49340.11411 57238.32038 0.89119804 0.812695292 0.801475425 0.714059283 1.010060188 0.858506686 0.739690504 0.901231058 0.862011914 1 15.80469372 -10.60800194 0.355049501 1.081226189 0.82871148 0.265224722 0.079596645 22.48520336 2.039057538 1.87136635 0.065064477 2.47E-11 10.60800194 -0.25251471 PAVVLPSAAPAGAAAPPSGS(ph)R ddPTM_A459_MK2206_30min_R1 2 PAVVLPSAAPAGAAAPPSGSR 21 0 P19419 P19419 ELK1 ETS domain-containing protein Elk-1 1 PAVVLPSAAPAGAAAPPS(0.003)GS(0.997)R;PAVVLPSAAPAGAAAPPS(0.091)GS(0.909)R 224.03 5.62E-21 29414000 7153.5 7148.3 6288.5 4857.2 5355.1 4770.7 4882.7 4049.8 3707.1 4028.4 TRUE FALSE 6545.05726 6682.944371 5861.654141 5231.302386 5141.795027 5040.812911 4556.983992 4014.393026 4092.466311 4527.468605 1.445632832 1.476088506 1.294686866 1.155458567 1.135688721 1.113384399 1.006519181 0.886674956 0.903919313 1 12.14448892 -5.771723705 0.528137612 0.918860511 1.605822609 0.927439182 0.053097768 0.433942463 0.188369205 0.040745746 0.165119531 1.69E-06 5.771723705 0.686962099 PAVVLPSAAPAGAAAPPSGS(ph)R ddPTM_A459_MK2206_30min_R2 2 PAVVLPSAAPAGAAAPPSGSR 21 0 P19419 P19419 ELK1 ETS domain-containing protein Elk-1 1 PAVVLPSAAPAGAAAPPS(0.042)GS(0.958)R;PAVVLPSAAPAGAAAPPS(0.062)GS(0.938)R 142.89 1.10E-05 13411200 122059 118555 104875 132103 107511 79642 90980 57288 47458 77492 TRUE FALSE 131403.9309 112667.7311 108371.4802 121309.7623 103289.5779 82672.83212 79034.21671 64775.7383 51585.81106 74963.44239 1.75290684 1.502969014 1.445657733 1.61825229 1.377865992 1.102841992 1.05430346 0.864097702 0.688146241 1 16.19389958 -6.900645839 1.065571817 0.833858887 1.589420402 0.887245552 0.111030989 0.156728498 0.373367112 0.06552087 0.051701526 1.26E-07 6.900645839 0.755561515 PCSEETPAIS(ph)PSK ddPTM_A459_MK2206_30min_R1 3 PCSEETPAISPSK 13 0 P33316-2;H0YNJ9 P33316-2 DUT "Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial" 1 PCSEET(0.001)PAIS(0.997)PS(0.003)K;PCSEET(0.004)PAIS(0.996)PSK;PCSEET(0.013)PAIS(0.986)PS(0.001)K 206.49 1.22E-05 178302000 14547.8 16422.1 16358.5 13846.5 9265.1 8077.2 12339.4 10715.1 15074.1 18126.1 TRUE FALSE 13310.43322 15353.01831 15248.1306 14912.95983 8896.051448 8534.524084 11516.26114 10621.41901 16641.10664 20371.69811 0.65337868 0.753644503 0.748495806 0.732043041 0.43668679 0.418940239 0.565306882 0.521381131 0.816873809 1 14.31427862 -8.501469287 3.92788777 0.99889339 0.605824256 0.55215566 0.11552119 0.159688913 6.352548358 0.128651347 0.03376349 3.15E-09 8.501469287 -0.393069134 PCSEETPAIS(ph)PSK ddPTM_A459_MK2206_30min_R2 4 PCSEETPAISPSK 13 0 P33316-2;H0YNJ9 P33316-2 DUT "Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial" 1 PCSEET(0.01)PAIS(0.989)PS(0.001)K;PCSEET(0.011)PAIS(0.935)PS(0.053)K;PCSEET(0.004)PAIS(0.878)PS(0.118)K;PCSEETPAIS(0.99)PS(0.01)K 164.93 0.00036255 354217000 591019 432014 431881 397502 352006 265672 519992 361056 279112 555482 TRUE FALSE 636267.8691 410560.813 446279.697 365024.8151 338184.4758 275782.3341 451716.4258 408247.2589 303388.6572 537356.6678 1.184069924 0.764037812 0.830509276 0.679297079 0.629348245 0.51322027 0.840626818 0.759732378 0.564594571 1 19.03552046 PCSEETPAIS(ph)PSKR ddPTM_A459_MK2206_30min_R1 3 PCSEETPAISPSKR 14 1 P33316-2;H0YNJ9 P33316-2 DUT "Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial" 1 PCSEETPAIS(0.5)PS(0.5)KR;PCSEETPAIS(0.5)PS(0.5)KR;PCSEET(0.011)PAIS(0.963)PS(0.026)KR 142.95 0.0009732 500404300 5752.4 9334.7 6484.3 6339.7 4432.8 3861.03 4564.62 5471.7 5437.4 5536.5 TRUE FALSE 5263.128173 8727.009333 6044.163782 6827.984792 4256.232189 4079.638182 4260.122528 5423.861504 6002.637188 6222.403418 0.845835254 1.402514229 0.971355178 1.097322744 0.684017397 0.655637044 0.684642612 0.871666644 0.964681456 1 12.60325622 -6.248757599 24.07697294 0.789694091 1.094639447 0.367226799 0.17135926 465.4253841 883631.3259 0.050305155 0.064456492 5.64E-07 6.248757599 0.304945356 PCSEETPAIS(ph)PSKR ddPTM_A459_MK2206_30min_R2 3 PCSEETPAISPSKR 14 1 P33316-2;H0YNJ9 P33316-2 DUT "Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial" 1 PCSEETPAIS(0.682)PS(0.318)KR;PCSEETPAIS(0.992)PS(0.007)KR;PCSEET(0.025)PAIS(0.926)PS(0.049)KR 140.49 0.001175 79175000 63579.4 71358 65729.6 58564 60945 38389.5 77027 48515.5 43251.5 77695 TRUE FALSE 68447.08775 67814.46548 67920.99206 53779.13386 58551.99308 39850.43932 66913.26237 54856.64243 47013.43729 75159.81851 0.910687241 0.902270213 0.903687547 0.715530385 0.779033189 0.530209361 0.890279723 0.729866616 0.625512917 1 16.19767396 -5.756049183 24.64617012 0.739195221 0.905220586 0.241242279 0.122359909 141.2059397 645639.3778 0.03184919 0.053146281 1.75E-06 5.756049183 0.166025365 PCSEETPAISPS(ph)KR ddPTM_A459_MK2206_30min_R1 4 PCSEETPAISPSKR 14 1 P33316-2;H0YNJ9 P33316-2 DUT "Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial" 1 PCSEETPAIS(0.006)PS(0.994)KR;PCSEETPAIS(0.003)PS(0.997)KR;PCSEETPAIS(0.251)PS(0.749)KR;PCSEETPAIS(0.026)PS(0.974)KR 142.74 0.00027911 3019910000 15258.3 24953.5 18180.8 20016.1 12424.6 9514.1 14447.7 15450.1 15203.1 16850.6 TRUE FALSE 13960.50146 23329.02261 16946.73795 21557.74349 11929.70187 10052.78012 13483.92029 15315.0214 16783.51665 18938.17954 0.737161744 1.23185138 0.894845141 1.138321846 0.62992865 0.530820827 0.711996645 0.808684983 0.886226504 1 14.20901004 -6.264130716 24.99728079 0.737723763 1.009516919 0.305315467 0.174447183 264.5448948 2457104.776 0.052457425 0.062167048 5.44E-07 6.264130716 0.271793156 PCSEETPAISPS(ph)KR ddPTM_A459_MK2206_30min_R2 4 PCSEETPAISPSKR 14 1 P33316-2;H0YNJ9 P33316-2 DUT "Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial" 1 PCSEETPAIS(0.025)PS(0.975)KR;PCSEETPAISPS(1)KR;PCSEETPAIS(0.002)PS(0.998)KR;PCSEETPAIS(0.284)PS(0.715)KR 131.82 0.00044048 1959028000 168860 174524 172782 142774 153127 90786 184239 123064 112420 203341 TRUE FALSE 181788.0514 165857.3919 178542.4656 131108.9075 147114.4646 94240.92485 160048.198 139148.8873 122198.0884 196705.9998 0.924161193 0.843174037 0.907661514 0.666522158 0.747890073 0.479095325 0.813641669 0.707395237 0.621221968 1 17.58568144 -5.758620348 24.9988858 0.702305059 0.886816464 0.267895198 0.128270542 87.34219392 774523.3439 0.033335134 0.054615086 1.74E-06 5.758620348 0.184511405 PCSNS(ph)PPK ddPTM_A459_MK2206_30min_R2 1 PCSNSPPK 8 0 Q96PU4;B1AL33;Q96PU4-2 Q96PU4 UHRF2 E3 ubiquitin-protein ligase UHRF2 1 PCS(0.009)NS(0.991)PPK 96.665 0.020894 4922800 70208 21888 26804 22446 24881 13390 32590 52304 16054 53963 TRUE FALSE 75583.17846 20801.07375 27697.63198 20612.09 23904.04692 13899.56583 28310.89385 59140.31239 17450.3479 52202.19173 1.447892817 0.398471272 0.530583699 0.394851046 0.457912707 0.266264028 0.542331517 1.132908608 0.334283817 1 15.67182276 -10.48685351 10.16661447 0.999999999 0.595288865 0.093159408 0.360156271 2.43E-10 0 0.341901829 0.082923374 3.26E-11 10.48685351 -0.404711134 PDERPS(ph)SPIPLLPPPK ddPTM_A459_MK2206_30min_R2 1 PDERPSSPIPLLPPPK 16 1 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 PDERPS(0.773)S(0.227)PIPLLPPPK 58.885 0.04327 2895900 42202 26441 32117 24834 21919 14180 31112 23728 19964 37606 TRUE FALSE 45433.01757 25127.97839 33187.76475 22804.98276 21058.34993 14719.62984 27026.95703 26829.33107 21700.43263 36378.9193 1.248883102 0.690729106 0.912280117 0.626873563 0.578861339 0.404619767 0.742929079 0.737496649 0.596511195 1 15.15081507 -2.247827543 1.11813543 0.663035432 199.9999137 0.490763545 0.164064668 444.9419159 2.135307513 0.048942085 225591.3681 0.005651614 2.247827543 199.3368783 PDERPSS(ph)PIPLLPPPK ddPTM_A459_MK2206_30min_R2 1 PDERPSSPIPLLPPPK 16 1 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 PDERPS(0.358)S(0.642)PIPLLPPPK 88.282 0.0077347 2832800 80774 45565 55723 47544 39575 31948 55897 52464 29651 68489 TRUE FALSE 86958.11954 43302.30836 57580.77701 43659.50311 38021.08665 33163.80353 48557.65676 59321.22494 32229.99038 66254.20954 1.312491993 0.65357822 0.869088582 0.658969497 0.573866731 0.500553908 0.732899194 0.895357825 0.486459511 1 16.0157245 -4.758907394 24.97567171 0.698220476 1.312492813 0.554897893 0.162248203 49.67622321 489907.2275 0.039297649 0.259872496 1.74E-05 4.758907394 0.614272336 PDKLT(ph)ILRMAVS(ph)HMKS(ph)LR ddPTM_A459_MK2206_30min_R1 1 PDKLTILRMAVSHMKSLR 18 3 P27540-3;P27540-4;P27540;A6NGV6;P27540-2 P27540-3 ARNT Aryl hydrocarbon receptor nuclear translocator 3 PDKLT(1)ILRMAVS(1)HMKS(1)LR 84.403 0.0042503 8151400 0 68.451 0 0 0 0 0 0 0 137.42 TRUE FALSE 0 63.99482746 0 0 0 0 0 0 0 154.4446271 0 0.414354508 0 0 0 0 0 0 0 1 7.270945872 -11.43469311 2.619481045 1.558845951 0.048747587 0.842866181 0.123563361 51441174.78 28954533.54 176679880.3 0.033115722 3.68E-12 11.43469311 -1.510098364 PDPAGHLT(ph)LRDNRLK ddPTM_A459_MK2206_30min_R1 2 PDPAGHLTLRDNRLK 15 2 Q9NTJ4-3;Q9NTJ4-2;Q9NTJ4;Q9NTJ4-4 Q9NTJ4-3 MAN2C1 Alpha-mannosidase 2C1 1 PDPAGHLT(1)LRDNRLK;PDPAGHLT(1)LRDNRLK 90.793 0.019656 22644000 27594 28891 29553 25175 27365 27287 29205 26703 26408 24694 TRUE FALSE 25246.9854 27010.19065 27547.0247 27113.98286 26274.9941 28831.96636 27256.78774 26469.53849 29153.2061 27753.27915 0.909693779 0.9732252 0.992568285 0.976965018 0.946734761 1.038867018 0.982110532 0.953744541 1.050441857 1 14.76037062 -3.595751619 1.128155423 0.991581491 1.03E-11 0.393468109 0.030882698 21.26345139 2.683891511 0.009139243 45.38422618 0.000253658 3.595751619 -0.991581491 PEIVDS(ph)ASELTAGVPNK ddPTM_A459_MK2206_30min_R2 1 PEIVDSASELTAGVPNK 17 0 A0A0G2JJW2;A0A0G2JID9;A0A0G2JL37;Q5SSZ2;A0A0G2JJF5;A8MS87;A0A0G2JKB6;Q5SSZ3;A0A0G2JL65;Q15109-8;Q15109-2;Q15109-3;Q15109-9;Q15109-4;Q15109-10;Q15109-7;Q15109;Q15109-6 A0A0G2JJW2 AGER Advanced glycosylation end product-specific receptor 1 PEIVDS(0.333)AS(0.333)ELT(0.333)AGVPNK 88.561 0.022132 0 12405 15869 17260 16487 19375 16508 19847 15378 16750 17813 TRUE FALSE 13354.73634 15080.96854 17835.43979 15139.95936 18614.24015 17136.22351 17241.06506 17387.9574 18206.88472 17231.76327 0.775006953 0.875184292 1.035032777 0.878607669 1.080228405 0.994455602 1.000539805 1.009064315 1.056588606 1 14.07278271 -3.850129891 0.736775187 1.016555199 4.17E-12 0.682866229 0.05136579 5.240634593 0.781821276 0.018861886 6.071855798 0.000141212 3.850129891 -1.016555199 PFEY(ph)ETPEMEKK ddPTM_A459_MK2206_30min_R1 1 PFEYETPEMEKK 12 1 Q16666-3;Q16666-2;Q16666;Q16666-6;H3BR65;H3BR88 Q16666-3 IFI16 Gamma-interferon-inducible protein 16 1 PFEY(1)ETPEMEKK 104.07 0.010428 0 2763.4 2893.6 2948.9 2263.1 2843.6 2964.2 3164.7 3123.4 2345.7 2180.4 TRUE FALSE 2528.358319 2705.226114 2748.736884 2437.404354 2730.333391 3132.030442 2953.588637 3096.092443 2589.543909 2450.524413 1.031762143 1.10393763 1.121693328 0.99464602 1.114183305 1.278106199 1.205288395 1.263440767 1.056730508 1 11.2588748 -6.529576341 24.91044158 1.181762029 1.068161097 0.199051224 0.087208045 210.8361325 784157.6755 0.027579954 0.027645775 2.95E-07 6.529576341 -0.113600932 PFPGSVNQPATPFS(ph)PTR ddPTM_A459_MK2206_30min_R2 2 PFPGSVNQPATPFSPTR 17 0 H0Y9Y3;Q9UMS6-5;Q9UMS6;Q9UMS6-3;Q9UMS6-4;Q9UMS6-2 H0Y9Y3 SYNPO2 Synaptopodin-2 1 PFPGSVNQPAT(0.001)PFS(0.759)PT(0.24)R;PFPGSVNQPAT(0.002)PFS(0.996)PT(0.002)R 132.25 0.00065385 0 23287 28669 21487.8 22762 23124 24609 23189 18323.5 17185.9 26290 TRUE FALSE 25069.87062 27245.33915 22204.19253 20902.27179 22216.03557 25545.51274 20144.25645 20718.44436 18680.69852 25432.15945 0.985754697 1.07129476 0.87307539 0.821883483 0.873541062 1.004457085 0.792078096 0.814655334 0.734530568 1 14.63436635 -5.30661585 7.356745957 0.85854246 1.028336148 0.385443922 0.082727636 0.226651776 32.46808598 0.021876297 0.046431175 4.94E-06 5.30661585 0.169793687 PFSAPKPQT(ph)SPSPK ddPTM_A459_MK2206_30min_R1 2 PFSAPKPQTSPSPK 14 1 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 PFSAPKPQT(0.492)S(0.492)PS(0.017)PK;PFSAPKPQT(0.497)S(0.497)PS(0.006)PK 88.385 0.028872 41040000 6066.3 7345.6 7445.9 6428.3 3738.2 3572.1 5169.2 4368.3 6301.5 9314.1 TRUE FALSE 5550.32933 6867.400105 6940.493053 6923.40878 3589.299578 3774.349215 4824.3721 4330.108414 6956.563475 10468.00103 0.530218646 0.656037393 0.663019906 0.661387858 0.342882998 0.360560646 0.460868516 0.41365189 0.664555101 1 13.35369835 -8.594913604 4.804409019 0.999936837 0.514449593 0.629300958 0.114124759 0.310860069 18.75705688 0.126162284 0.032846131 2.54E-09 8.594913604 -0.485487244 PGAFPS(ph)EETLR ddPTM_A459_MK2206_30min_R1 1 PGAFPSEETLR 11 0 B5MCX1;P13725 B5MCX1 OSM Oncostatin-M 1 PGAFPS(0.951)EET(0.049)LR 90.149 0.028234 13298000 1940.7 1624.6 2146.8 1333.4 1801.1 1720.9 1932.8 1442.8 2122 2232.5 TRUE FALSE 1775.633274 1518.838245 2001.081197 1436.098699 1729.358373 1818.335871 1803.866439 1430.185752 2342.589494 2509.078955 0.7076833 0.605336967 0.797536161 0.572360904 0.689240317 0.724702532 0.718935702 0.570004283 0.933645189 1 11.29294215 -8.384630007 5.119232474 0.994486522 0.676089979 0.743727739 0.069262302 0.101802115 3.576425358 0.062848723 0.016383264 4.12E-09 8.384630007 -0.318396543 PGGQAPS(ph)SPSYENSLHSLQSR ddPTM_A459_MK2206_30min_R2 1 PGGQAPSSPSYENSLHSLQSR 21 0 Q99081;Q99081-4;Q99081-2;B4DZP2 Q99081 TCF12 Transcription factor 12 1 PGGQAPS(0.431)S(0.431)PS(0.138)YENSLHSLQSR 185.64 8.32E-17 9393000 46338 37854 33135 43376 37779 31238 44843 42194 28776 36691 TRUE FALSE 49885.67291 35974.2254 34239.70436 39832.04205 36295.60664 32426.78398 38955.06023 47708.90067 31278.88446 35493.77567 1.405476649 1.013536169 0.964667853 1.122226117 1.022590749 0.913590717 1.097518072 1.344148369 0.881249849 1 15.11527843 -4.758052782 24.98563533 1.04822891 1.405477151 0.439366793 0.123552493 94.29371424 695568.8788 0.030779368 0.217385782 1.75E-05 4.758052782 0.357248241 PGGQAPSS(ph)PSYENSLHSLQSR ddPTM_A459_MK2206_30min_R2 1 PGGQAPSSPSYENSLHSLQSR 21 0 Q99081;Q99081-4;Q99081-2;B4DZP2 Q99081 TCF12 Transcription factor 12 1 PGGQAPS(0.036)S(0.949)PS(0.015)YENSLHSLQSR 264.54 3.03E-49 11619000 54436 55870 46288 59315 45533 40503 59217 36782 36162 61680 TRUE FALSE 58603.66201 53095.57704 47831.21882 54468.77476 43745.14564 42044.37005 51441.73677 41589.53369 39307.30539 59667.38665 0.982172428 0.889859269 0.801630866 0.912873478 0.733150019 0.704645744 0.86214161 0.69702288 0.658773705 1 15.86465497 -4.498533014 0.665655298 0.767072006 1.188700135 0.260778896 0.10030618 5.622591309 1.44806176 0.043084059 1.955781746 3.17E-05 4.498533014 0.42162813 PGGQAPSSPS(ph)YENSLHSLQSR ddPTM_A459_MK2206_30min_R2 1 PGGQAPSSPSYENSLHSLQSR 21 0 Q99081;Q99081-4;Q99081-2;B4DZP2 Q99081 TCF12 Transcription factor 12 1 PGGQAPS(0.005)S(0.061)PS(0.732)Y(0.201)ENSLHSLQSR 88.471 0.00058227 9442600 80420 74720 66421 90928 67419 73936 112800 66107 60472 79197 TRUE FALSE 86577.01703 71009.51345 68635.44299 83498.89154 64771.79131 76749.68629 97989.2245 74747.41188 65731.74525 76612.80838 1.130059306 0.926862165 0.89587426 1.089881618 0.845443375 1.001786619 1.27901883 0.975651637 0.857973316 1 16.22529799 -7.004956259 24.99624926 1.042456309 0.971210513 0.028437539 0.126109743 693.0253901 3495198.028 0.046102624 0.039539694 9.89E-08 7.004956259 -0.071245796 PGPNIES(ph)GNEDDDASFK ddPTM_A459_MK2206_30min_R2 1 PGPNIESGNEDDDASFK 17 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 PGPNIES(0.984)GNEDDDAS(0.016)FK 101.38 0.004007 2700200 10072 8007.5 9104.2 6696.7 6545.4 5826.4 8957.8 5230 6180.1 9859.4 TRUE FALSE 10843.12006 7609.859194 9407.729484 6149.558188 6288.394708 6048.127735 7781.6301 5913.578957 6717.633927 9537.688585 1.136870843 0.797872475 0.986374151 0.644763994 0.659320615 0.634129295 0.815882174 0.620022231 0.704325148 1 13.21942396 -5.756975949 24.99952414 0.706861854 0.956122543 0.418099199 0.132437735 101.4109841 567990.3352 0.033952537 0.056338488 1.75E-06 5.756975949 0.249260688 PGPS(ph)PLPHR ddPTM_A459_MK2206_30min_R1 1 PGPSPLPHR 9 0 P08621;P08621-4 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 PGPS(1)PLPHR 87.568 0.024104 0 1519.1 1690.4 1528.8 1467.8 1023 1176.1 1491.3 1188.6 1514.1 1981.1 TRUE FALSE 1389.892568 1580.354653 1425.029315 1580.85021 982.2517438 1242.689766 1391.818098 1178.208196 1671.496113 2226.533625 0.624240547 0.709782523 0.640021466 0.710005092 0.441157382 0.558127554 0.625105358 0.529167035 0.750716762 1 11.12058368 -8.578792362 4.173276425 0.999839022 0.607361862 0.714633606 0.076871959 0.152620232 7.946960745 0.078282097 0.020474447 2.64E-09 8.578792362 -0.39247716 PGPS(ph)PLPHR ddPTM_A459_MK2206_30min_R2 1 PGPSPLPHR 9 0 P08621;P08621-4 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 PGPS(1)PLPHR 72.289 0.04489 4479200 36253 31556 32152 31624 29007 27174 39493 31965 26070 38702 TRUE FALSE 39028.55755 29988.97493 33223.93163 29040.21804 27868.03943 28208.12561 34307.52166 36142.93525 28337.52148 37439.15691 1.042452896 0.801005616 0.887411319 0.775664316 0.744355422 0.753439125 0.916354013 0.965377915 0.756895289 1 15.19226033 -10.47350972 10.24697547 0.999999329 0.846249278 0.179284518 0.096594991 0 0 0.094657739 0.022957874 3.36E-11 10.47350972 -0.153750051 PGPTPSGTNVGSSGRS(ph)PSK ddPTM_A459_MK2206_30min_R1 6 PGPTPSGTNVGSSGRSPSK 19 1 P60468 P60468 SEC61B Protein transport protein Sec61 subunit beta 1 PGPTPSGTNVGSS(0.016)GRS(0.982)PS(0.002)K;PGPTPSGTNVGSS(0.014)GRS(0.959)PS(0.026)K;PGPTPSGTNVGS(0.002)S(0.056)GRS(0.938)PS(0.003)K;PGPTPSGTNVGS(0.001)S(0.033)GRS(0.956)PS(0.01)K;PGPTPSGTNVGS(0.004)S(0.047)GRS(0.947)PS(0.001)K;PGPTPSGTNVGS(0.001)S(0.005)GRS(0.987)PS(0.007)K 161.46 7.60E-07 385149000 23511.9 25409.8 16113.9 22657.8 19175.7 15019 17995.6 20925.4 20355.4 13943.5 TRUE FALSE 21512.08944 23755.6174 15020.13336 24402.90768 18411.89126 15869.3628 16795.14636 20742.45143 22471.41667 15670.92605 1.372738878 1.515903867 0.958471332 1.557209038 1.174907673 1.012662733 1.071739239 1.3236264 1.433955888 1 13.93580282 -5.228905334 24.82046523 1.204923579 1.444321429 0.21908943 0.189534964 965.6488064 736697.4507 0.048294284 0.127755414 5.90E-06 5.228905334 0.23939785 PGPTPSGTNVGSSGRS(ph)PSK ddPTM_A459_MK2206_30min_R2 5 PGPTPSGTNVGSSGRSPSK 19 1 P60468 P60468 SEC61B Protein transport protein Sec61 subunit beta 1 PGPTPSGTNVGS(0.008)S(0.026)GRS(0.886)PS(0.08)K;PGPTPSGTNVGSS(0.021)GRS(0.878)PS(0.1)K;PGPTPSGTNVGSS(0.05)GRS(0.932)PS(0.017)K;PGPTPSGTNVGSS(0.001)GRS(0.848)PS(0.151)K;PGPTPSGTNVGS(0.009)S(0.26)GRS(0.657)PS(0.073)K 135.33 0.00010505 489707700 139349 81285.3 87658.1 73461.5 63388.4 62686.6 143689.8 69253.7 83012.6 93856.4 TRUE FALSE 150017.6666 77248.7902 90580.5773 67459.46046 60899.45291 65072.18249 124823.1567 78305.39637 90232.8859 90793.87335 1.652288431 0.850815009 0.997650766 0.742995733 0.670744078 0.716702351 1.374797132 0.862452426 0.993821307 1 16.47030733 -4.75885875 24.98457092 0.906102432 1.652289426 0.572788596 0.191676554 52.9922516 512943.8575 0.049711503 0.329350164 1.74E-05 4.75885875 0.746186994 PGS(ph)LPLNAEACWPK ddPTM_A459_MK2206_30min_R1 2 PGSLPLNAEACWPK 14 0 Q01581;D6RIW1 Q01581 HMGCS1 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic" 1 PGS(1)LPLNAEACWPK;PGS(1)LPLNAEACWPK 149.6 0.00043698 51672000 7044.1 11273.5 10420.6 9799.2 5227.6 4322.6 6444 6717 7461.4 7642.4 TRUE FALSE 6444.962305 10539.5931 9713.278705 10553.93608 5019.373622 4567.341876 6014.132518 6658.273977 8237.039231 8589.198209 0.750356686 1.227075315 1.130871412 1.228745201 0.584382092 0.53175416 0.700197198 0.775191562 0.958999784 1 13.06830775 -6.259761859 24.99740263 0.732935864 1.09779233 0.421412918 0.185336551 137.5457497 2049623.753 0.05674548 0.069480495 5.50E-07 6.259761859 0.364856467 PGS(ph)LPLNAEACWPK ddPTM_A459_MK2206_30min_R2 2 PGSLPLNAEACWPK 14 0 Q01581;D6RIW1 Q01581 HMGCS1 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic" 1 PGS(1)LPLNAEACWPK;PGS(1)LPLNAEACWPK 98.676 0.010227 7454000 56567.9 41408 47794 34436.5 43240 23388.5 66439.5 42856.9 30962 57005.2 TRUE FALSE 60898.78192 39351.73893 49387.42811 31622.92779 41542.18034 24278.56576 57715.91384 48458.44398 33655.01879 55145.12499 1.104336638 0.713603223 0.895590102 0.5734492 0.75332462 0.440266764 1.046618606 0.878743932 0.610299075 1 15.75094573 -10.06056214 16.21382071 1 0.775008616 0.100060118 0.197883349 0 0 0.187731722 0.04553163 8.70E-11 10.06056214 -0.224991384 PGWLSS(ph)PTLGR ddPTM_A459_MK2206_30min_R1 2 PGWLSSPTLGR 11 0 C9JS59;C9J266;Q5XPI4;Q5XPI4-2 C9JS59 RNF123 E3 ubiquitin-protein ligase RNF123 1 PGWLSS(0.999)PTLGR;PGWLS(0.045)S(0.945)PT(0.01)LGR 155.53 0.00053549 70205000 11986.1 12412.8 12498.5 9925.7 8585.4 8134.3 11587.8 9847.7 12205.4 13526.8 TRUE FALSE 10966.61925 11604.72446 11650.13664 10690.17913 8243.425338 8594.857036 10814.79901 9761.602597 13474.19501 15202.60211 0.721364618 0.763338038 0.76632517 0.70318088 0.542237788 0.565354337 0.711378153 0.642100775 0.88630847 1 13.89203066 -8.428213967 3.351572622 0.997624847 0.676588973 0.695535714 0.072153438 0.140323744 2.951649404 0.078883689 0.020982695 3.73E-09 8.428213967 -0.321035874 PGWLSS(ph)PTLGR ddPTM_A459_MK2206_30min_R2 4 PGWLSSPTLGR 11 0 C9JS59;C9J266;Q5XPI4;Q5XPI4-2 C9JS59 RNF123 E3 ubiquitin-protein ligase RNF123 1 PGWLS(0.043)S(0.952)PT(0.004)LGR;PGWLS(0.045)S(0.954)PT(0.002)LGR;PGWLS(0.155)S(0.842)PT(0.003)LGR;PGWLS(0.046)S(0.949)PT(0.006)LGR 160.72 0.00060296 47788900 312933 266503 259011 286588 237836 204618 287024 205026 201601 317776 TRUE FALSE 336891.3911 253268.8486 267646.2975 263172.8437 228497.3636 212404.8814 249337.404 231823.6022 219135.8906 307406.9951 1.095913224 0.823887721 0.870657798 0.856105579 0.743305674 0.690956565 0.811098667 0.754125982 0.712852648 1 18.22979047 -1.522878798 0.906339424 0.781297283 157.9828147 0.489327249 0.087030857 731.1657699 1.559885615 0.027271673 237822.9139 0.029999996 1.522878798 157.2015174 PHS(ph)IDGR ddPTM_A459_MK2206_30min_R2 2 PHSIDGR 7 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 PHS(1)IDGR;PHS(1)IDGR 98.582 0.014396 6582200 15128.4 10137.6 9397.1 10939.4 8292.6 4179.4 11663.5 16123.5 6910.8 16289.9 TRUE FALSE 16286.64194 9634.181525 9710.394624 10045.61603 7966.990857 4338.449996 10132.06844 18230.89681 7511.888892 15758.3619 1.033523792 0.61136948 0.61620584 0.637478444 0.505572274 0.275310976 0.642964574 1.156903042 0.476692244 1 13.94382995 -10.51679613 15.35685065 1 0.656290195 0.146715437 0.244374911 0 0 0.243387852 0.059030225 3.04E-11 10.51679613 -0.343709805 PIFGGTVYHS(ph)PVSR ddPTM_A459_MK2206_30min_R2 2 PIFGGTVYHSPVSR 14 0 O43663-3;O43663-2;O43663-4;O43663;G3V3N7;H0YNE4 O43663-3 PRC1 Protein regulator of cytokinesis 1 1 PIFGGTVYHS(0.995)PVS(0.005)R;PIFGGTVY(0.028)HS(0.969)PVS(0.002)R 124.99 0.00093675 9041300 102414 61505 66010 61998 56622 54251 74428 61316 36050 76468 TRUE FALSE 110254.8946 58450.75114 68210.74045 56932.56508 54398.73578 56315.55982 64655.5142 69330.21173 39185.56384 73972.85542 1.490477743 0.790164863 0.922105008 0.769641306 0.735387805 0.761300338 0.87404378 0.93723855 0.529728961 1 16.17470835 -4.760362662 24.99577696 0.811204605 1.49047855 0.72388427 0.125464452 13.32608637 309219.0069 0.029522431 0.175922354 1.74E-05 4.760362662 0.679273945 PIFLSPWVGS(ph)LQKGQR ddPTM_A459_MK2206_30min_R2 1 PIFLSPWVGSLQKGQR 16 1 X6RK39;Q5TEJ8 X6RK39 THEMIS2 Protein THEMIS2 1 PIFLSPWVGS(1)LQKGQR 66.606 0.028955 27039000 23664 70277 37907 110980 88967 181310 48828 58009 93898 30731 TRUE FALSE 25475.73403 66787.14637 39170.80046 101912.579 85473.70856 188209.8791 42416.82495 65590.97547 102065.0783 29728.24999 0.856953707 2.246588561 1.317628871 3.428139195 2.875167849 6.331011048 1.426818766 2.206351719 3.433268973 1 14.85954692 -5.758848901 24.99999984 3.08090098 1.551009927 0.185834583 1.403611938 112.9391747 1089917.988 0.387588076 0.633777972 1.74E-06 5.758848901 -1.529891054 PIGPDDAIDALSSDFTCGS(ph)PTAAGK ddPTM_A459_MK2206_30min_R1 3 PIGPDDAIDALSSDFTCGSPTAAGK 25 0 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;H0YA91;B7Z574;E7EVY3;E7ES10;E9PDE4;P20810-5;F8W7E0;E9PCH5;P20810-2;P20810-3 P20810-6;P20810-5 CAST Calpastatin 1 PIGPDDAIDALSS(0.005)DFT(0.047)CGS(0.913)PT(0.035)AAGK;PIGPDDAIDALSSDFT(0.001)CGS(0.948)PT(0.051)AAGK;PIGPDDAIDALSSDFT(0.019)CGS(0.966)PT(0.015)AAGK 148.9 4.73E-10 14163500 9729.9 10292 10180.3 8228.7 6673.78 7193.7 8824.1 7590.5 11042.9 15379.6 TRUE FALSE 8902.320911 9621.988929 9489.2896 8862.4759 6407.949211 7601.001077 8235.460389 7524.137059 12190.84897 17284.94096 0.515033342 0.556668892 0.548991728 0.512728156 0.370724391 0.439747008 0.476452908 0.435300131 0.705287279 1 14.07722806 -8.556527247 2.993867142 0.99916949 0.483001097 0.898243601 0.054487189 0.08415343 1.942209975 0.059542949 0.015877037 2.78E-09 8.556527247 -0.516168393 PIGPDDAIDALSSDFTCGS(ph)PTAAGK ddPTM_A459_MK2206_30min_R2 2 PIGPDDAIDALSSDFTCGSPTAAGK 25 0 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;H0YA91;B7Z574;E7EVY3;E7ES10;E9PDE4;P20810-5;F8W7E0;E9PCH5;P20810-2;P20810-3 P20810-6;P20810-5 CAST Calpastatin 1 PIGPDDAIDALSSDFT(0.008)CGS(0.975)PT(0.017)AAGK;PIGPDDAIDALSSDFT(0.002)CGS(0.974)PT(0.024)AAGK 132.77 3.53E-08 8014500 100797 68558 77708 70787 56354 48428 77545 58333 47073 97810 TRUE FALSE 108514.0958 65153.50941 80298.74594 65003.47566 54141.2588 50270.96148 67363.24835 65957.32339 51167.32445 94618.46771 1.146859577 0.688591889 0.848658279 0.687006218 0.572206041 0.531301792 0.711946092 0.697087207 0.540775239 1 16.52983418 -2.195119739 1.130558492 0.667502023 199.9999999 0.471855427 0.138721153 545.2177271 2.19509316 0.040103423 280035.335 0.006380875 2.195119739 199.3324978 PILGDFS(ph)NAHMIMYS(ph)EK ddPTM_A459_MK2206_30min_R1 1 PILGDFSNAHMIMYSEK 17 0 Q96QW7;A0A0J9YWL0;Q9Y4K1-2;Q9Y4K1 Q96QW7 AIM1 Absent in melanoma 1 protein 2 PILGDFS(0.973)NAHMIMY(0.08)S(0.947)EK 55.975 0.040867 1981700 491.12 389.1 517.76 526.45 494.55 272.44 520.82 532.33 499.71 566.56 TRUE FALSE 449.347665 363.7695193 482.6158938 566.9972702 474.8510263 287.8653174 486.0770481 527.6758949 551.6566427 636.7497301 0.705689604 0.571291203 0.75793655 0.890455454 0.745742014 0.452085496 0.763372209 0.828702189 0.866363371 1 9.314582633 -8.197789454 1.423403713 0.981211391 0.695369837 0.435249327 0.112526512 0.417833056 1.583113529 0.113060071 0.035525358 6.34E-09 8.197789454 -0.285841554 PIPNQPPTAAHTANFLLNASGSTST(ph)PAPSR ddPTM_A459_MK2206_30min_R1 2 PIPNQPPTAAHTANFLLNASGSTSTPAPSR 30 0 P53396;P53396-2;P53396-3;K7EIE7 P53396 ACLY ATP-citrate synthase 1 PIPNQPPTAAHTANFLLNAS(0.091)GS(0.152)T(0.152)S(0.152)T(0.432)PAPS(0.02)R;PIPNQPPTAAHTANFLLNAS(0.082)GS(0.156)T(0.156)S(0.156)T(0.446)PAPS(0.005)R 166.68 2.47E-27 61352000 5383.1 5360.7 5585.8 4305.8 4508.4 5261.4 6485.8 4573.3 6558.6 9640.1 TRUE FALSE 4925.239077 5011.717456 5206.651459 4637.433462 4328.820881 5559.295921 6053.144116 4533.31612 7240.38994 10834.38837 0.454593181 0.462575024 0.480567179 0.428029096 0.399544555 0.513115806 0.558697354 0.418419201 0.668278605 1 13.40333009 -8.597399879 2.73653815 0.99971105 0.466377494 0.930023654 0.045277988 0.083973665 1.499278438 0.045655294 0.012253939 2.53E-09 8.597399879 -0.533333556 down PIPNQPPTAAHTANFLLNASGSTST(ph)PAPSR ddPTM_A459_MK2206_30min_R2 2 PIPNQPPTAAHTANFLLNASGSTSTPAPSR 30 0 P53396;P53396-2;P53396-3;K7EIE7 P53396 ACLY ATP-citrate synthase 1 PIPNQPPTAAHTANFLLNAS(0.085)GS(0.16)T(0.16)S(0.16)T(0.429)PAPS(0.006)R;PIPNQPPTAAHTANFLLNAS(0.037)GS(0.18)T(0.18)S(0.18)T(0.417)PAPS(0.007)R 99.443 7.48E-08 50791000 140909 95117 116096 132611 95442 80802 136300 114873 76307 144197 TRUE FALSE 151697.1014 90393.62809 119966.5827 121776.2571 91694.46752 83876.97673 118403.6463 129887.2955 82944.04493 139491.8637 1.087497847 0.648020793 0.860025664 0.872998997 0.65734635 0.601303721 0.848821165 0.931146033 0.594615648 1 17.08982145 -4.746323356 24.91888885 0.775452415 1.087498716 0.309956743 0.137815335 990.442809 1632658.847 0.03352009 0.767805574 1.79E-05 4.746323356 0.3120463 PIPQT(ph)PESAGNK ddPTM_A459_MK2206_30min_R1 1 PIPQTPESAGNK 12 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 PIPQT(0.733)PES(0.267)AGNK 168.61 0.0008923 7410800 4661.3 4617.3 4292.7 2879.8 2591.7 3010.8 4001.6 2729.5 3915 5515.7 TRUE FALSE 4264.831958 4316.712931 4001.323484 3101.602695 2488.467101 3181.268894 3734.660565 2705.636269 4321.97826 6199.026557 0.68798414 0.696353353 0.6454761 0.500337056 0.401428689 0.51318846 0.602459198 0.436461474 0.697202733 1 12.59782597 -8.571517406 7.100586173 0.999995222 0.560572296 0.664410513 0.094998253 0.442154277 63.88598443 0.101523125 0.026263396 2.68E-09 8.571517406 -0.439422925 PIPQT(ph)PESAGNK ddPTM_A459_MK2206_30min_R2 3 PIPQTPESAGNK 12 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 PIPQT(0.992)PES(0.008)AGNK;PIPQT(0.5)PES(0.5)AGNK;PIPQT(0.896)PES(0.104)AGNK 201.08 0.0001984 87280000 313663 201198 201409 167249 146705 103375 189251 151114 101122 220711 TRUE FALSE 337677.2804 191206.7999 208123.8755 153584.2217 140944.6246 107309.0081 164402.1164 170865.1187 109917.4088 213509.2181 1.58155832 0.895543535 0.974777002 0.719332978 0.660133674 0.502596604 0.770000086 0.800270453 0.514813411 1 17.70393883 -1.808925101 0.869740384 0.6974007 200 0.737288013 0.151155812 203.5990223 0.910407971 0.049622123 79849.02623 0.015526548 1.808925101 199.3025993 PIPQTPES(ph)AGNK ddPTM_A459_MK2206_30min_R1 2 PIPQTPESAGNK 12 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 PIPQT(0.116)PES(0.884)AGNK;PIPQT(0.227)PES(0.773)AGNK 139.19 0.0011784 19096900 11273.1 11827.6 10438.9 6309.1 6115.5 7357 9761.4 6227.2 10001.9 12791 TRUE FALSE 10314.26365 11057.62109 9730.336552 6795.027975 5871.906685 7773.546982 9110.234817 6172.756247 11041.6333 14375.64565 0.717481767 0.769191267 0.676862577 0.472676368 0.408462119 0.540744198 0.633727002 0.429389844 0.768079123 1 13.81133913 -8.5383494 6.098505794 0.999937373 0.58209314 0.567818284 0.114977161 0.11661804 25.74982226 0.123156433 0.031914037 2.90E-09 8.5383494 -0.417844233 PIPQTPES(ph)AGNK ddPTM_A459_MK2206_30min_R2 1 PIPQTPESAGNK 12 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 PIPQT(0.166)PES(0.834)AGNK 153.81 0.0010453 0 59211 35794 33752 32459 27396 20031 34652 27587 20137 45887 TRUE FALSE 63744.23969 34016.52201 34877.27483 29806.99587 26320.29539 20793.29374 30102.15078 31192.71562 21888.47986 44389.71095 1.436013849 0.766315466 0.785706284 0.671484342 0.59293685 0.468425977 0.678133516 0.702701481 0.493098049 1 15.43793769 -2.429220009 1.145107483 0.641344708 199.999786 0.711547273 0.14384018 190.1179591 1.332070674 0.040974601 98327.94539 0.003722031 2.429220009 199.3584413 PIRPGQHPAAS(ph)PTHPSAIR ddPTM_A459_MK2206_30min_R2 1 PIRPGQHPAASPTHPSAIR 19 1 P33176 P33176 KIF5B Kinesin-1 heavy chain 1 PIRPGQHPAAS(0.5)PT(0.5)HPS(0.001)AIR 61.985 0.01438 11836000 28134 31558 24778 55731 48093 44719 53761 33439 40082 39368 TRUE FALSE 30287.96067 29990.87561 25604.08615 51177.59903 46204.62717 46420.81288 46702.11612 37809.59211 43568.25991 38083.42538 0.795305579 0.787504677 0.672315736 1.343828674 1.213247672 1.218924307 1.226310807 0.992809647 1.144021565 1 15.21687563 -5.753651766 24.99999861 1.169530025 0.755288184 0.766278502 0.103971268 82.72509555 265563.2421 0.029152773 0.049324688 1.76E-06 5.753651766 -0.414241842 PIRPGQHPAASPT(ph)HPSAIR ddPTM_A459_MK2206_30min_R1 1 PIRPGQHPAASPTHPSAIR 19 1 P33176 P33176 KIF5B Kinesin-1 heavy chain 1 PIRPGQHPAAS(0.245)PT(0.671)HPS(0.084)AIR 54.805 0.033835 9257100 2142.9 1782.2 1506.2 1664.2 1940.2 2559.2 2437 1748.2 1554.4 2113.9 TRUE FALSE 1960.635102 1666.178456 1403.963341 1792.376972 1862.917726 2704.099692 2274.432177 1732.915672 1715.985442 2375.785891 0.82525749 0.701316757 0.590946914 0.754435397 0.784126942 1.138191662 0.957338868 0.729407342 0.722281182 1 11.21418911 -6.532375332 24.99862755 0.902817894 0.715418448 0.340991943 0.126396753 266.6722993 701977.4791 0.045375206 0.04543123 2.94E-07 6.532375332 -0.187399446 PIS(ph)PGLSYASHTVGFTPPTSLTR ddPTM_A459_MK2206_30min_R1 2 PISPGLSYASHTVGFTPPTSLTR 23 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 PIS(0.993)PGLS(0.003)Y(0.002)AS(0.001)HTVGFTPPTSLTR;PIS(0.996)PGLS(0.004)YASHTVGFTPPTSLTR 135.63 3.62E-06 33168000 3748.6 2858 3184.7 2447.8 2814 2912.5 3507.3 2578.5 2789.4 3592.8 TRUE FALSE 3429.761885 2671.943681 2968.531437 2636.32998 2701.912421 3077.403233 3273.334416 2555.956446 3079.368112 4037.903188 0.849391807 0.661715637 0.73516657 0.652895787 0.669137494 0.762129028 0.81065203 0.632991017 0.762615637 1 11.97939061 -8.556428085 21.94587273 1.000000001 0.719048164 0.604427826 0.067124184 1752.803332 1146572.693 0.063139906 0.016302654 2.78E-09 8.556428085 -0.280951838 PISPGLS(ph)YASHTVGFTPPTSLTR ddPTM_A459_MK2206_30min_R2 1 PISPGLSYASHTVGFTPPTSLTR 23 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 PIS(0.055)PGLS(0.766)Y(0.145)AS(0.034)HTVGFTPPTSLTR 97.69 4.24E-05 20464000 12117 12218 9503.7 10024 10598 8297.8 10331 11427 7038.7 12630 TRUE FALSE 13044.68684 11611.27189 9820.548615 9205.007135 10181.86927 8613.578594 8974.52729 12920.54813 7650.913403 12217.88413 1.067671513 0.950350466 0.803784723 0.753404357 0.833357819 0.704997567 0.734540219 1.057511104 0.626206086 1 13.57670684 -5.021545306 2.514751853 0.807706296 1.071882412 0.304679922 0.123426446 0.388332605 4.297805505 0.031185418 0.175537649 9.52E-06 5.021545306 0.264176116 PISPGLSY(ph)ASHTVGFTPPTSLTR ddPTM_A459_MK2206_30min_R2 1 PISPGLSYASHTVGFTPPTSLTR 23 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 PIS(0.038)PGLS(0.408)Y(0.519)AS(0.035)HTVGFTPPTSLTR 102.67 0.00021999 22727000 7316.8 7948.5 11843 10920 9752.4 8391.8 10546 8207.9 6723.4 11782 TRUE FALSE 7876.979834 7553.789048 12237.83971 10027.80107 9369.471774 8711.155829 9161.297532 9280.700712 7308.189179 11397.5543 0.691111411 0.662755258 1.073725063 0.879820425 0.822059849 0.764300445 0.803795032 0.814271243 0.641206787 1 13.47643666 -9.31188642 15.71675946 0.999999432 0.802348937 0.211417674 0.118090748 0 0 0.119025827 0.028868003 4.88E-10 9.31188642 -0.197650495 PIT(ph)PVYTVAPNVQR ddPTM_A459_MK2206_30min_R2 1 PITPVYTVAPNVQR 14 0 B7Z8Z7;A0AV96;A0AV96-2 B7Z8Z7 RBM47 RNA-binding protein 47 1 PIT(1)PVYTVAPNVQR 122.1 0.004266 5603500 41645 40526 34818 43559 32165 28678 41799 29598 22532 39843 TRUE FALSE 44833.37322 38513.53777 35978.81474 40000.09036 30902.04048 29769.36139 36310.74109 33466.56023 24491.79263 38542.92617 1.163206266 0.999237515 0.933473877 1.037806268 0.801756471 0.772369001 0.942085739 0.868293188 0.635441962 1 15.23417848 -4.111465523 0.519799269 0.830109301 1.648118243 0.461475842 0.105219794 7.408062144 0.910868615 0.05937795 4.275304178 7.74E-05 4.111465523 0.818008943 PKPSS(ph)SPVIFAGGQDR ddPTM_A459_MK2206_30min_R1 2 PKPSSSPVIFAGGQDR 16 1 Q15366;Q15366-2;Q15366-6;Q15366-3;H3BSS4 Q15366 PCBP2 Poly(rC)-binding protein 2 1 PKPS(0.012)S(0.693)S(0.295)PVIFAGGQDR;PKPS(0.071)S(0.807)S(0.122)PVIFAGGQDR 163.34 0.00015505 45868000 5956 7274.8 6712.7 5127.3 4172.7 4597.9 6764.9 4857.7 7013.6 11052.6 TRUE FALSE 5449.410924 6801.209198 6257.060627 5522.205534 4006.492523 4858.229125 6313.625864 4815.229641 7742.688818 12421.87953 0.438694556 0.547518528 0.503712873 0.444554749 0.32253513 0.391102579 0.508266551 0.387640987 0.623310571 1 13.60059586 -8.6247682 3.095653129 0.999773437 0.445693003 0.877937403 0.063231489 0.14449271 3.125834623 0.066359144 0.017625854 2.37E-09 8.6247682 -0.554080434 down PKPSS(ph)SPVIFAGGQDR ddPTM_A459_MK2206_30min_R2 2 PKPSSSPVIFAGGQDR 16 1 Q15366;Q15366-2;Q15366-6;Q15366-3;H3BSS4 Q15366 PCBP2 Poly(rC)-binding protein 2 1 PKPS(0.001)S(0.695)S(0.304)PVIFAGGQDR;PKPS(0.028)S(0.857)S(0.115)PVIFAGGQDR 219.95 4.22E-10 22518600 108211 67252 79153 83686 60646 55689 96858 78881 51102 115824 TRUE FALSE 116495.7174 63912.36347 81791.92151 76848.5861 58264.73332 57808.28392 84140.42825 89191.01754 55546.75959 112044.6724 1.039725628 0.570418585 0.729993848 0.685874522 0.52001342 0.515939604 0.750954298 0.796030866 0.495755473 1 16.77371453 -9.886836282 8.05866144 0.99999911 0.67304051 0.271603089 0.157836239 0 0 0.148720187 0.036069943 1.30E-10 9.886836282 -0.326958601 PKPSSS(ph)PVIFAGGQDR ddPTM_A459_MK2206_30min_R2 2 PKPSSSPVIFAGGQDR 16 1 Q15366;Q15366-2;Q15366-6;Q15366-3;H3BSS4 Q15366 PCBP2 Poly(rC)-binding protein 2 1 PKPS(0.016)S(0.28)S(0.703)PVIFAGGQDR;PKPS(0.002)S(0.01)S(0.988)PVIFAGGQDR 104.76 0.017969 24533000 89613 60926 65878 66148 54529 37622 73781 66534 41569 89943 TRUE FALSE 96473.84018 57900.50343 68074.33964 60743.4968 52387.91747 39053.73157 64093.46607 75230.22225 45184.59648 87008.16728 1.108790625 0.665460557 0.782390226 0.698135574 0.602103447 0.44885133 0.736637353 0.864634029 0.519314426 1 16.40886321 -4.759386309 24.99819002 0.690166629 1.108791159 0.388049904 0.152627946 54.6684954 665477.0213 0.036970148 0.235729844 1.74E-05 4.759386309 0.41862453 PLEGSSSEDSPPEGQAPPSHS(ph)PR ddPTM_A459_MK2206_30min_R1 3 PLEGSSSEDSPPEGQAPPSHSPR 23 0 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 PLEGSSSEDSPPEGQAPPS(0.019)HS(0.981)PR;PLEGSSSEDSPPEGQAPPS(0.276)HS(0.724)PR;PLEGSSSEDSPPEGQAPPS(0.025)HS(0.975)PR 154.46 8.64E-09 45776000 9249.4 9431 9110.8 8064.6 8887.9 7753.5 9480.4 8274.3 9011.2 10603.8 TRUE FALSE 8462.689959 8817.040186 8492.38428 8685.736889 8533.876123 8192.49647 8847.979814 8201.958667 9947.946487 11917.4788 0.710107406 0.739841063 0.712599068 0.728823356 0.716080663 0.687435372 0.742437219 0.688229348 0.834735824 1 13.54079144 -8.566422557 2.985439471 0.999668566 0.717073072 0.95802435 0.018529572 0.046318834 1.058978527 0.017009622 0.004535398 2.71E-09 8.566422557 -0.282595494 PLEGSSSEDSPPEGQAPPSHS(ph)PR ddPTM_A459_MK2206_30min_R2 5 PLEGSSSEDSPPEGQAPPSHSPR 23 0 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 PLEGSSSEDSPPEGQAPPS(0.263)HS(0.737)PR;PLEGSSSEDSPPEGQAPPS(0.348)HS(0.652)PR;PLEGSSSEDSPPEGQAPPS(0.086)HS(0.914)PR;PLEGSSSEDSPPEGQAPPS(0.275)HS(0.725)PR;PLEGSSSEDSPPEGQAPPS(0.105)HS(0.895)PR 170.68 1.29E-12 83115000 175916 151360.6 151226 160549 137706.1 135399.9 180689 141957 117462.9 176707 TRUE FALSE 189384.2642 143844.2527 156267.7994 147431.6331 132299.0666 140552.6381 156964.3173 160511.2673 127679.6107 170941.0651 1.107892151 0.841484477 0.914161845 0.862470543 0.773945491 0.822228632 0.918236453 0.938986002 0.746921816 1 17.38313949 -4.758035557 24.97700657 0.865166702 1.107892494 0.48956764 0.073185516 79.85616556 585885.7697 0.017661683 0.124692713 1.75E-05 4.758035557 0.242725792 PLLS(ph)PEER ddPTM_A459_MK2206_30min_R2 1 PLLSPEER 8 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 PLLS(1)PEER 82.029 0.042305 1577800 14017 8892.2 9839.1 10416 6956.3 8815.9 9097.9 7238 6896.4 9813.5 TRUE FALSE 15090.1523 8450.626278 10167.13068 9564.979481 6683.160709 9151.395252 7903.334801 8184.031452 7496.236406 9493.286299 1.589560435 0.890168695 1.070981151 1.007551988 0.703988113 0.963986018 0.832518324 0.862086236 0.789635556 1 13.21269188 -2.734549355 1.372510518 0.884909303 200 0.766452518 0.111947221 186.7447163 1.630969138 0.031560184 115828.8157 0.001842683 2.734549355 199.1150907 PLPS(ph)PGAAGAQALEK ddPTM_A459_MK2206_30min_R2 2 PLPSPGAAGAQALEK 15 0 H9KVB4;O15417;O15417-2;O15417-3 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 PLPS(1)PGAAGAQALEK;PLPS(1)PGAAGAQALEK 133.9 0.0004979 13656900 46460 48052 43627 48871 42107 33277 43182 32153 34698 52109 TRUE FALSE 50017.01332 45665.80755 45081.50241 44878.08297 40453.66761 34543.37955 37512.15153 36355.5075 37715.96932 50408.6876 0.992230024 0.905911456 0.894320097 0.890284693 0.802513803 0.685266394 0.744160448 0.721215116 0.748203755 1 15.62138477 -6.225075042 2.258805216 0.758891915 0.92717406 0.382102523 0.084530848 0.281479731 2.820919254 0.026644319 0.035042164 5.96E-07 6.225075042 0.168282145 PLPTFPTSECT(ph)SDVEPDTR ddPTM_A459_MK2206_30min_R2 1 PLPTFPTSECTSDVEPDTR 19 0 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 PLPTFPT(0.004)S(0.019)ECT(0.488)S(0.488)DVEPDTR 92.439 0.012618 0 10835 8094.9 8288.7 9961.6 9224.2 7615.1 9712.4 8299.1 6761.4 12240 TRUE FALSE 11664.53593 7692.919037 8565.041121 9147.705414 8862.01156 7904.897967 8437.150213 9383.820865 7349.49435 11840.6098 0.985129662 0.649706321 0.723361488 0.772570464 0.748442159 0.667609025 0.712560447 0.792511621 0.620702352 1 13.53145576 -10.50954144 5.430401733 1.000000824 0.737780651 0.393115602 0.096298211 8.99E-07 1.68E-07 0.087289517 0.021170751 3.09E-11 10.50954144 -0.262220173 PLPTFPTSECTS(ph)DVEPDTR ddPTM_A459_MK2206_30min_R1 1 PLPTFPTSECTSDVEPDTR 19 0 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 PLPTFPT(0.029)S(0.102)ECT(0.345)S(0.49)DVEPDT(0.034)R 78.234 0.0076296 3400900 546.21 522.79 660.43 389.51 581.93 699.8 535.66 533.24 606.81 651.88 TRUE FALSE 499.7519712 488.756276 615.6018517 419.5101277 558.7504958 739.4220712 499.9270988 528.5779389 669.890071 732.6398158 0.68212505 0.667116727 0.840251701 0.572600777 0.76265374 1.009257285 0.682364087 0.721470397 0.914351168 1 9.516960297 -6.52581753 24.99300879 0.842115243 0.695556596 0.327230603 0.116276282 126.1831947 1073112.46 0.037955345 0.03815536 2.98E-07 6.52581753 -0.146558646 PLPTSSTSSLAPVSGSGPGPS(ph)PAR ddPTM_A459_MK2206_30min_R2 1 PLPTSSTSSLAPVSGSGPGPSPAR 24 0 Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;Q96L91-4;A0A0A0MR72;A0A0A0MR80 Q96L91-3 EP400 E1A-binding protein p400 1 PLPTSSTSSLAPVSGSGPGPS(1)PAR 223.11 5.64E-58 0 5934.5 5212.5 6980.2 5405.1 4253.9 6504.1 7708.7 6754.3 4746.8 8134.8 TRUE FALSE 6388.849883 4953.65483 7212.916384 4963.48604 4086.870512 6751.618083 6696.53843 7637.110201 5159.668084 7869.362142 0.811863753 0.629486195 0.916582088 0.630735497 0.519339489 0.857962559 0.850963307 0.970486561 0.65566535 1 12.94203099 -6.946547106 24.99996347 0.865055266 0.703906039 0.280801809 0.132367512 131.3200347 61417.8848 0.045945472 0.040520092 1.13E-07 6.946547106 -0.161149227 PLS(ph)ADLTK ddPTM_A459_MK2206_30min_R2 2 PLSADLTK 8 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 PLS(0.998)ADLT(0.002)K;PLS(1)ADLTK 123.96 0.0056569 7880200 119822 85205 99283 81119 74001 49235 111672 82911 51203 99910 TRUE FALSE 128995.6644 80973.8436 102593.0457 74491.31821 71095.34891 51108.67243 97009.33226 93747.75238 55656.54439 96649.94488 1.334668784 0.837805378 1.06149099 0.770733168 0.735596373 0.528801879 1.003718444 0.969972125 0.57585697 1 16.56048129 -1.926795119 0.999360539 0.805815623 199.9999988 0.424429078 0.174301988 650.1584555 2.231690816 0.055327104 294751.1651 0.011835998 1.926795119 199.1941831 PLS(ph)LIGSTLR ddPTM_A459_MK2206_30min_R2 1 PLSLIGSTLR 10 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 PLS(1)LIGSTLR 156.01 0.00051582 3080500 15637 10028 9634.2 10476 10191 8009.6 11878 7895 9002.9 11749 TRUE FALSE 16834.18074 9530.024102 9955.39942 9620.077289 9790.850134 8314.410941 10318.40433 8926.903608 9785.955968 11365.63109 1.48114791 0.838494935 0.875921393 0.846418224 0.861443597 0.731539751 0.907860219 0.785429646 0.861012986 1 13.47239017 -4.760922974 25 0.847905432 1.481148629 0.885335542 0.067381225 3.474493206 168046.9328 0.01539185 0.088453869 1.73E-05 4.760922974 0.633243197 PLS(ph)PGALQLAGEK ddPTM_A459_MK2206_30min_R2 1 PLSPGALQLAGEK 13 0 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L "Histone-lysine N-methyltransferase, H3 lysine-79 specific" 1 PLS(1)PGALQLAGEK 88.78 0.02334 1642400 8776.9 8958.6 9585.2 8620.9 7587.3 8743 10775 7283.9 6059.8 8135.4 TRUE FALSE 9448.866212 8513.728951 9904.765784 7916.544893 7289.384479 9075.720992 9360.229557 8235.930739 6586.87045 7869.942564 1.200627087 1.081803187 1.258556299 1.005921559 0.926230963 1.153213117 1.189364405 1.046504555 0.836965505 1 12.94213739 -1.522878745 0.161694246 0.952455833 1.858545677 0.251014049 0.108942723 104.8613344 1.094518461 0.340179108 22.6818991 0.03 1.522878745 0.906089844 PLT(ph)YPQYSPPQPR ddPTM_A459_MK2206_30min_R2 1 PLTYPQYSPPQPR 13 0 E9PPX2;P15407;E9PKL5 E9PPX2 FOSL1 Fos-related antigen 1 1 PLT(0.972)YPQYS(0.028)PPQPR 164.11 0.00084848 5778900 24887 20717 24797 18885 19879 16606 27179 15021 17095 28557 TRUE FALSE 26792.36785 19688.22391 25623.7196 17342.03509 19098.45058 17237.95297 23610.36465 16984.29627 18581.8922 27625.18743 0.96985289 0.712691053 0.927549168 0.627761717 0.691341937 0.623994064 0.854668035 0.614811983 0.672643118 1 14.75369663 -1.522905671 0.896125245 0.721888432 112.1486098 0.181691071 0.130905947 1367.30087 3.074732073 0.041501856 311496.1966 0.02999814 1.522905671 111.4267214 PLTS(ph)PESLSR ddPTM_A459_MK2206_30min_R1 1 PLTSPESLSR 10 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 PLT(0.027)S(0.973)PESLSR 131.42 0.0026131 3085700 2365.6 2515.1 2392.4 2046.7 2065.4 2129.7 2415.7 2151.4 2361.7 3053.4 TRUE FALSE 2164.393298 2351.366533 2230.010554 2204.337189 1983.130744 2250.281774 2254.553061 2132.590537 2607.207166 3431.678244 0.630709858 0.685194347 0.649830898 0.642349612 0.577889477 0.655737984 0.656982648 0.62144245 0.759746975 1 11.74469858 -8.637499456 2.53796801 0.999813938 0.640947413 0.942392119 0.027141988 0.100032872 1.384912534 0.027202298 0.007346252 2.30E-09 8.637499456 -0.358866525 PLTS(ph)PESLSR ddPTM_A459_MK2206_30min_R2 3 PLTSPESLSR 10 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 PLT(0.062)S(0.937)PESLSR;PLT(0.042)S(0.958)PESLSR;PLT(0.013)S(0.985)PES(0.002)LSR 155.26 0.00052832 23399400 204922 176355 160354 161083 135764 126290 185422 130974 117897 193423 TRUE FALSE 220610.9859 167597.4671 165700.1223 147922.0036 130433.2232 131096.0544 161075.8687 148092.7515 128151.468 187111.6234 1.179034108 0.895708477 0.885568301 0.790554862 0.697087764 0.700630202 0.860854424 0.791467408 0.684893144 1 17.51353966 -3.942007338 0.982626721 0.778805348 2.657280968 0.61092134 0.091275972 5.371071878 1.235645556 0.028465983 15.84112767 0.000114286 3.942007338 1.87847562 PLTS(ph)PLR ddPTM_A459_MK2206_30min_R2 1 PLTSPLR 7 0 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 PLT(0.133)S(0.867)PLR 79.451 0.046733 20123000 69246 60487 55608 58668 43758 42153 58891 45285 41170 65566 TRUE FALSE 74547.527 57483.30354 57461.94297 53874.63673 42039.84105 43757.16195 51158.54096 51203.90499 44750.89218 63426.58679 1.175335625 0.906296656 0.90595988 0.849401481 0.662811026 0.689886752 0.806578811 0.807294032 0.70555416 1 15.95280009 -3.92220645 0.827534453 0.772670497 2.400243767 0.594421306 0.094435711 5.653468797 1.051934006 0.032984291 11.78305742 0.000119617 3.92220645 1.62757327 PMEEDGEEKS(ph)PSK ddPTM_A459_MK2206_30min_R1 1 PMEEDGEEKSPSK 13 1 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 PMEEDGEEKS(0.955)PS(0.045)K 87.138 0.014042 29442000 7349.9 11362 11007 9963.2 3709.5 3405 5270.7 5252.3 9981.9 10527 TRUE FALSE 6724.752409 10622.33173 10259.87551 10730.56739 3561.74276 3597.788157 4919.10122 5206.379695 11019.55423 11831.16423 0.568393125 0.897826412 0.867190693 0.906974764 0.301047529 0.304094178 0.415774908 0.440056413 0.931400664 1 13.53030443 -6.245356691 24.56006239 0.516852318 0.820440876 0.178973783 0.243397683 915.6484449 1398296.465 0.071584861 0.092105737 5.68E-07 6.245356691 0.303588558 PMEEDGEEKS(ph)PSK ddPTM_A459_MK2206_30min_R2 2 PMEEDGEEKSPSK 13 1 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 PMEEDGEEKS(0.979)PS(0.021)K;PMEEDGEEKS(0.855)PS(0.145)K 223.39 2.69E-08 16053400 74735 47950 51397 32523 37321 18392.5 57874 45136 25425 77324 TRUE FALSE 80456.76906 45568.87273 53110.55033 29865.76686 35855.59002 19092.43948 50275.07428 51035.43018 27636.42054 74800.92421 1.075611965 0.609202001 0.710025322 0.399270025 0.479346885 0.255243363 0.672118357 0.682283417 0.369466298 1 16.19076848 -10.16744938 11.78919298 1.000022581 0.575446832 0.246392999 0.21803832 0 0 0.214035238 0.05191117 6.80E-11 10.16744938 -0.424575749 PMEEDGEEKSPS(ph)K ddPTM_A459_MK2206_30min_R1 1 PMEEDGEEKSPSK 13 1 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 PMEEDGEEKS(0.332)PS(0.668)K 153.09 0.0019987 8411600 2127.1 4103.7 3406.2 3305 1189.1 959.75 1806.5 1854.5 3187.4 2997 TRUE FALSE 1946.178975 3836.548384 3174.996634 3559.551673 1141.735629 1014.090216 1685.991681 1838.286302 3518.741636 3368.290986 0.577794194 1.139019283 0.942613523 1.056782709 0.338965854 0.301069658 0.500548108 0.54576232 1.044666761 1 11.71780106 -6.248935278 24.84713114 0.577020904 0.94501872 0.228119538 0.268744409 920.9862485 1830107.902 0.079957196 0.102493378 5.64E-07 6.248935278 0.367997816 PMGAQT(ph)K ddPTM_A459_MK2206_30min_R2 1 PMGAQTK 7 0 Q6ZS81-5;Q6ZS81-4;Q6ZS81 Q6ZS81-5 WDFY4 WD repeat- and FYVE domain-containing protein 4 1 PMGAQT(1)K 95.741 0.031987 1931800 13178 18915 15276 22064 18964 20867 22221 14912 17357 19012 TRUE FALSE 14186.91781 17975.7086 15785.29422 20261.30062 18219.37807 21661.10831 19303.35601 16861.0496 18866.68049 18391.64 0.771378616 0.977384758 0.858286385 1.101658179 0.990633683 1.177769264 1.049572306 0.916777928 1.025829153 1 14.16676251 -4.015021644 0.805001409 1.033576591 0.156030672 0.463145648 0.081336 6.978740454 1.421378186 0.030120709 7.32278903 9.66E-05 4.015021644 -0.87754592 PMLSQPAY(ph)S(ph)FYPEDEMT(ph)IEKK ddPTM_A459_MK2206_30min_R1 1 PMLSQPAYSFYPEDEMTIEKK 21 1 Q16625-7 Q16625-7 3 PMLS(0.083)QPAY(0.745)S(0.912)FY(0.265)PEDEMT(0.995)IEKK 44.577 0.044697 0 266.02 136.96 146.59 114.54 190.1 261.22 110.19 102.75 109.68 0 TRUE FALSE 243.3936021 128.0438791 136.6398792 123.3618906 182.5279145 276.0100507 102.8394262 101.8516676 121.0816285 0 0 PMS(ph)SEELPLASSWR ddPTM_A459_MK2206_30min_R1 2 PMSSEELPLASSWR 14 0 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 PMS(0.5)S(0.5)EELPLASSWR;PMS(0.961)S(0.038)EELPLAS(0.001)SWR 167.03 0.00022203 4166300 1239.68 1420.19 1561.97 1044.96 1046.82 1366.27 1422.21 1128.88 1056.26 1082.94 TRUE FALSE 1134.238706 1327.735373 1455.947828 1125.443 1005.122943 1443.627027 1327.336966 1119.010321 1166.062007 1217.102783 0.931916944 1.090898313 1.196240653 0.924690187 0.825832425 1.186117596 1.090570973 0.919404948 0.958063709 1 10.24923529 -7.769499197 24.98982311 0.954050746 1.037022326 0.087863608 0.111778605 483.0935359 1497823.082 0.063265229 0.03122737 1.70E-08 7.769499197 0.08297158 PMSIS(ph)PPDFSPK ddPTM_A459_MK2206_30min_R2 1 PMSISPPDFSPK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 PMS(0.006)IS(0.992)PPDFS(0.002)PK 122.39 0.0035531 7980200 38229 26712 37520 25390 25796 24029 34004 24887 16355 44251 TRUE FALSE 41155.84163 25385.52092 38770.89807 23315.55578 24783.11943 24943.44043 29539.23395 28139.81635 17777.52834 42807.09349 0.961425742 0.593021363 0.905711996 0.544665706 0.578948894 0.582694091 0.690054651 0.657363396 0.415293983 1 15.38556226 -1.729474475 1.014712045 0.638838183 200 0.195722556 0.167087236 1725.514325 3.580722302 0.049535454 798224.0105 0.018643418 1.729474475 199.3611618 PMSISPPDFS(ph)PK ddPTM_A459_MK2206_30min_R1 2 PMSISPPDFSPK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 PMSISPPDFS(1)PK;PMSIS(0.001)PPDFS(0.999)PK 142.39 0.00091249 34788000 4720.2 6733.1 6600.9 5351.4 3123.7 3303.1 4695.1 3749.6 6954.1 8622.9 TRUE FALSE 4318.722203 6294.773966 6152.849299 5763.565755 2999.276414 3490.118668 4381.898446 3716.817643 7677.00358 9691.169952 0.445634761 0.649537053 0.634892312 0.594723422 0.309485483 0.360133883 0.45215371 0.383526206 0.792164787 1 13.24245513 -8.468774272 3.81644814 0.997370218 0.48417373 0.708602696 0.110739126 0.12000411 3.660950964 0.120600034 0.031722868 3.40E-09 8.468774272 -0.513196488 down PNEIS(ph)VTCPILTQ ddPTM_A459_MK2206_30min_R2 1 PNEISVTCPILTQ 13 0 D6R968 D6R968 N4BP2L2 1 PNEIS(0.967)VT(0.033)CPILTQ 89.189 0.022794 8543100 32071 27053 28985 24759 26426 22665 37135 23275 21240 32471 TRUE FALSE 34526.38042 25709.58736 29951.34543 22736.1105 25388.38246 23527.53246 32259.12989 26317.12242 23087.41681 31411.47393 1.099164608 0.818477586 0.953516078 0.723815462 0.808251867 0.749010776 1.026985552 0.837818769 0.734999474 1 14.93900402 -4.757701899 24.91650129 0.845563278 1.099164986 0.341706977 0.103428036 117.8839777 785772.7348 0.025099972 0.182288295 1.75E-05 4.757701899 0.253601708 PNNSGEAPSS(ph)PTPK ddPTM_A459_MK2206_30min_R1 3 PNNSGEAPSSPTPK 14 0 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 PNNS(0.003)GEAPS(0.012)S(0.885)PT(0.1)PK;PNNSGEAPS(0.044)S(0.924)PT(0.032)PK;PNNSGEAPS(0.021)S(0.978)PT(0.001)PK 169.98 0.00016771 19633200 8902.5 12077 10400.5 8147.7 4477.7 5411.1 7446.5 6762.6 11669.9 16611.6 TRUE FALSE 8145.295626 11290.7851 9694.543037 8775.237266 4299.343727 5717.471806 6949.757572 6703.475301 12883.02787 18669.57042 0.436287255 0.604769411 0.519269743 0.47002888 0.230286162 0.306245493 0.372250535 0.359058894 0.690054863 1 14.18840111 -8.530408191 3.069547074 0.998549364 0.413984808 0.770525885 0.101492409 0.124308152 2.979164901 0.112577384 0.029982996 2.95E-09 8.530408191 -0.584564556 down PNNSGEAPSS(ph)PTPK ddPTM_A459_MK2206_30min_R2 4 PNNSGEAPSSPTPK 14 0 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 PNNSGEAPS(0.227)S(0.771)PT(0.003)PK;PNNSGEAPS(0.035)S(0.96)PT(0.005)PK;PNNSGEAPS(0.017)S(0.982)PT(0.001)PK;PNNSGEAPS(0.009)S(0.989)PT(0.002)PK 195.5 1.35E-05 24327700 310748 183141 195624 167527 133337 84947 225781 159262 94195 259859 TRUE FALSE 334539.1058 174046.4843 202146.0065 153839.5082 128101.5194 88179.71761 196135.6835 180078.0902 102387.9108 251379.8221 1.330811292 0.692364577 0.804145714 0.611980337 0.509593484 0.350782799 0.780236384 0.716358571 0.407303617 1 17.93950933 -2.45514144 1.182884066 0.614862159 199.9997113 0.541636634 0.185783286 310.8788799 2.078857706 0.05378564 166356.9425 0.003506377 2.45514144 199.3848491 PNSSPS(ph)PSPGQASETPHPRPS ddPTM_A459_MK2206_30min_R1 2 PNSSPSPSPGQASETPHPRPS 21 1 O00204-2;O00204 O00204-2 SULT2B1 Sulfotransferase family cytosolic 2B member 1 1 PNS(0.054)S(0.154)PS(0.758)PS(0.034)PGQASETPHPRPS;PNS(0.001)S(0.002)PS(0.989)PS(0.009)PGQASETPHPRPS 188.53 7.86E-17 13105500 2279.5 1792.43 1621.42 1111.29 1927.59 1980.37 2447.5 1694.39 1681.08 1936.62 TRUE FALSE 2085.616555 1675.742481 1511.362528 1196.881748 1850.810009 2092.496838 2284.231741 1679.576127 1855.834282 2176.543106 0.958224328 0.769910082 0.694386674 0.549900319 0.850343833 0.961385434 1.049476913 0.771671428 0.852652206 1 11.08782288 -6.513689236 24.09291901 0.918802009 0.736362812 0.350511068 0.117636646 332.0743418 870631.3478 0.04002813 0.042194763 3.06E-07 6.513689236 -0.182439197 PNSSPS(ph)PSPGQASETPHPRPS ddPTM_A459_MK2206_30min_R2 4 PNSSPSPSPGQASETPHPRPS 21 1 O00204-2;O00204 O00204-2 SULT2B1 Sulfotransferase family cytosolic 2B member 1 1 PNS(0.022)S(0.057)PS(0.603)PS(0.318)PGQASETPHPRPS;PNS(0.157)S(0.157)PS(0.677)PS(0.008)PGQASETPHPRPS;PNS(0.192)S(0.192)PS(0.614)PS(0.002)PGQASETPHPRPS;PNS(0.072)S(0.196)PS(0.723)PS(0.009)PGQASETPHPRPS 118.09 4.15E-05 18387900 27159 33965.1 29638.1 43973.7 39730.3 36737.1 46210.8 29102.5 37111.5 41477.7 TRUE FALSE 29238.31392 32278.44252 30626.21946 40380.90805 38170.28879 38135.15608 40143.26645 32906.29667 40339.39119 40124.28605 0.728693687 0.80446148 0.763283848 1.006395678 0.951301383 0.950425786 1.00047304 0.820109214 1.005360971 1 15.2921881 -5.75283162 24.99930605 0.95518782 0.769377788 0.726431288 0.055141362 98.82839343 287021.8431 0.014612018 0.024807987 1.77E-06 5.75283162 -0.185810032 PQQTSAS(ph)SPSSVNSR ddPTM_A459_MK2206_30min_R1 1 PQQTSASSPSSVNSR 15 0 Q9ULD2;Q9ULD2-5;H0YC63;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 PQQT(0.014)S(0.113)AS(0.375)S(0.375)PS(0.113)S(0.01)VNSR 156.72 0.00020968 0 472.49 576.31 500.22 378.28 546.81 460.19 575.31 480.59 400.78 536.36 TRUE FALSE 432.3022444 538.7921143 466.2664601 407.4151911 525.0293998 486.2455601 536.9321196 476.3882523 442.4425152 602.8083261 0.717147102 0.893803372 0.773490411 0.675861917 0.870972376 0.806633782 0.890717822 0.790281474 0.733968819 1 9.235555534 PQQTSAS(ph)SPSSVNSR ddPTM_A459_MK2206_30min_R2 1 PQQTSASSPSSVNSR 15 0 Q9ULD2;Q9ULD2-5;H0YC63;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 PQQT(0.027)S(0.011)AS(0.304)S(0.304)PS(0.036)S(0.304)VNS(0.015)R 164.7 8.36E-06 0 13892 7877.8 8504.6 11333 6570.2 6629 9813.6 8404.6 6392.8 11366 TRUE FALSE 14955.5822 7486.599907 8788.139119 10407.05765 6312.220935 6881.27124 8525.062532 9503.110077 6948.834188 10995.12835 1.360200784 0.680901547 0.799275719 0.94651534 0.574092519 0.625847286 0.775349069 0.864301878 0.631992094 1 13.42457683 -4.756916112 24.99791884 0.758756487 1.360201684 0.637105389 0.134314962 85.86329334 474466.2367 0.032821396 0.255057503 1.75E-05 4.756916112 0.601445196 PQQTSASS(ph)PSSVNSR ddPTM_A459_MK2206_30min_R2 1 PQQTSASSPSSVNSR 15 0 Q9ULD2;Q9ULD2-5;H0YC63;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 PQQTS(0.001)AS(0.029)S(0.693)PS(0.211)S(0.065)VNS(0.001)R 149.31 0.0004004 0 11817 7453 7028.4 9097.3 5922 6873.8 8375.5 6561.1 5044.6 6368.2 TRUE FALSE 12721.71861 7082.894858 7262.723348 8354.021489 5689.472524 7135.387276 7275.786789 7418.658298 5483.370189 6160.406156 2.0650779 1.149744786 1.178935798 1.356082907 0.923554776 1.158265721 1.181056347 1.204248244 0.89009881 1 12.58880976 -4.761185382 6.683520579 1.12749388 2.089047246 0.819223826 0.133719876 0.046156845 10.45311002 0.032442393 0.201657257 1.73E-05 4.761185382 0.961553366 PQSPVIQAAAVS(ph)PK ddPTM_A459_MK2206_30min_R2 2 PQSPVIQAAAVSPK 14 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 PQSPVIQAAAVS(1)PK;PQSPVIQAAAVS(1)PK 130.11 0.00099806 10708600 59073 51987 47046 40156 44535 37294 60706 44164 32553 65482 TRUE FALSE 63595.6743 49405.40118 48614.49016 36875.12635 42786.33213 38713.2493 52735.22928 49936.38644 35384.4011 63345.3277 1.003952093 0.779937573 0.767451869 0.582128591 0.675445746 0.611146089 0.832503851 0.788319964 0.558595281 1 15.95095059 -4.646109666 1.824202767 0.71173594 1.177810056 0.298480322 0.125672415 1.515693215 3.917614198 0.032744428 1.365489538 2.26E-05 4.646109666 0.466074116 PQT(ph)IAPS(ph)T(ph)Y(ph)VSTY(ph)LK ddPTM_A459_MK2206_30min_R2 1 PQTIAPSTYVSTYLK 15 0 A0A0U1RQI8 A0A0U1RQI8 5 PQT(0.992)IAPS(0.993)T(0.993)Y(0.71)VS(0.293)T(0.261)Y(0.757)LK 44.612 0.047011 0 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 PQT(ph)SPSPK ddPTM_A459_MK2206_30min_R2 2 PQTSPSPK 8 0 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 PQT(0.498)S(0.498)PS(0.004)PK;PQT(0.494)S(0.494)PS(0.012)PK 120.27 0.017463 87955000 1145600 286500 425760 455710 570460 250150 641420 2313300 895140 1119910 TRUE FALSE 1233308.017 272272.8266 439954.6259 418477.0353 548060.8741 259669.6335 557200.7835 2615656.253 972997.6592 1083367.428 1.138402341 0.251320853 0.406099181 0.386274337 0.505886424 0.239687503 0.514322998 2.414375939 0.898123419 1 20.04709119 -7.628368272 12.11335627 1.491551833 0.461995203 0.481754846 0.448058111 0.332742481 36.05113427 0.194993972 0.112519542 2.35E-08 7.628368272 -1.02955663 PRPATS(ph)TPDLASHR ddPTM_A459_MK2206_30min_R1 2 PRPATSTPDLASHR 14 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 PRPAT(0.032)S(0.774)T(0.194)PDLASHR;PRPAT(0.227)S(0.652)T(0.12)PDLASHR 97.214 0.0061883 19398300 6751.1 6836.9 6928.7 6085.2 6263.4 5653.5 6757.1 6786 4487.1 5509.6 TRUE FALSE 6176.883494 6391.816567 6458.399148 6553.883158 6013.915515 5973.596284 6306.346188 6726.670717 4953.550102 6192.170843 0.997531181 1.032241637 1.042994341 1.05841446 0.971212789 0.964701465 1.018438662 1.086318657 0.79996987 1 12.59622956 -8.251388156 24.99904359 0.899984925 1.020118763 0.420704188 0.057009801 561.2522472 1395935.285 0.037966205 0.013968373 5.61E-09 8.251388156 0.120133838 PRPATS(ph)TPDLASHR ddPTM_A459_MK2206_30min_R2 1 PRPATSTPDLASHR 14 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 PRPAT(0.175)S(0.65)T(0.175)PDLASHR 110.77 0.0022794 18909000 22338 34365 26754 27531 26686 28719 37807 28234 29476 28257 TRUE FALSE 24048.21446 32658.48407 27645.96501 25281.62923 25638.17355 29811.92167 32842.89549 31924.28074 32039.7692 27334.9764 0.87975984 1.194750769 1.011376948 0.924882058 0.937925578 1.090614502 1.201497122 1.167891286 1.172116219 1 14.73846051 -6.965854002 5.9575158 1.14921953 0.999335624 0.348643649 0.093737903 0.20137527 20.02751486 0.033830654 0.029341422 1.08E-07 6.965854002 -0.149883906 PRPVS(ph)PSSLLDTAISEEAR ddPTM_A459_MK2206_30min_R1 3 PRPVSPSSLLDTAISEEAR 19 1 P57059;A0A0B4J2F2 P57059 SIK1;LOC102724428 Serine/threonine-protein kinase SIK1 1 PRPVS(0.977)PS(0.018)S(0.005)LLDTAISEEAR;PRPVS(0.97)PS(0.026)S(0.004)LLDTAISEEAR;PRPVS(0.811)PS(0.144)S(0.045)LLDTAISEEAR 147.26 2.31E-05 13662800 1386.15 1905.94 1652.35 1180.8 1483.67 1485.04 1927.66 1609.91 1539.28 1822.4 TRUE FALSE 1268.250664 1781.86296 1540.193086 1271.745421 1424.572282 1569.121681 1799.069319 1595.834727 1699.293664 2048.17267 0.619210813 0.869976924 0.751984004 0.620917093 0.695533293 0.766108104 0.878377758 0.779150484 0.829663284 1 11.00012163 -7.078152239 3.780483654 0.852900133 0.718038111 0.433865266 0.085094029 0.277806729 7.521695589 0.034048998 0.026469886 8.35E-08 7.078152239 -0.134862022 PRPVS(ph)PSSLLDTAISEEAR ddPTM_A459_MK2206_30min_R2 3 PRPVSPSSLLDTAISEEAR 19 1 P57059;A0A0B4J2F2 P57059 SIK1;LOC102724428 Serine/threonine-protein kinase SIK1 1 PRPVS(0.917)PS(0.082)S(0.002)LLDTAISEEAR;PRPVS(0.885)PS(0.067)S(0.048)LLDTAISEEAR;PRPVS(0.697)PS(0.243)S(0.06)LLDTAISEEAR 102.92 0.00057541 9707700 11826.2 11404.2 8833.9 12218.3 10106.3 8729.7 12275.5 9067.3 9427.3 12816.5 TRUE FALSE 12731.62296 10837.88401 9128.417817 11220.02581 9709.475882 9061.914851 10663.7121 10252.42724 10247.26951 12398.29865 1.026884681 0.874142841 0.736263746 0.904964957 0.783129698 0.730899868 0.860094792 0.826922107 0.826506104 1 13.59785454 -4.810561348 3.680744798 0.824394077 1.042537925 0.363369059 0.075561535 0.236581342 5.503492555 0.017828222 0.134217265 1.55E-05 4.810561348 0.218143848 PRS(ph)PPLPAVIR ddPTM_A459_MK2206_30min_R2 1 PRSPPLPAVIR 11 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 PRS(1)PPLPAVIR 71.933 0.034101 2861100 6985 8498.2 6612.9 8062.1 7091.3 6352.1 8362.5 8293.2 6507.1 7715 TRUE FALSE 7519.776971 8076.191746 6833.370785 7403.400641 6812.859931 6593.833617 7264.493705 9377.149715 7073.075796 7463.260182 1.007572668 1.082126517 0.915601308 0.991979438 0.912853065 0.883505795 0.973367339 1.256441486 0.947719311 1 12.86559027 -7.56613301 24.99960203 1.084229267 0.964180837 0.199664679 0.09135445 187.5729204 108409.193 0.041898385 0.024190057 2.72E-08 7.56613301 -0.120048431 PS(ph)GT(ph)T(ph)KSLLEIQQEEAR ddPTM_A459_MK2206_30min_R2 1 PSGTTKSLLEIQQEEAR 17 1 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;C9JH18 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 3 PS(1)GT(0.999)T(0.99)KS(0.011)LLEIQQEEAR 93.851 0.012856 10205000 22684 22385 26597 25798 30069 30782 29251 23650 25623 23050 TRUE FALSE 24420.70448 21273.39345 27483.73071 23690.22088 28888.33998 31953.43058 25410.30856 26741.1362 27851.64222 22297.88039 1.095202955 0.954054515 1.232571447 1.062442728 1.295564398 1.433025473 1.139584038 1.19926808 1.24907129 1 14.44461896 -5.530352446 1.506988905 1.22587694 1.026437404 0.200595939 0.123060551 0.628189185 2.690167516 0.038138013 0.121044009 2.95E-06 5.530352446 -0.199439536 PSADLTNSSAPS(ph)PSHK ddPTM_A459_MK2206_30min_R2 1 PSADLTNSSAPSPSHK 16 0 Q7KZI7-14;E9PC69;Q7KZI7-13;E7ETY4;Q7KZI7-15;Q7KZI7-16;Q7KZI7-3;Q7KZI7-9;Q7KZI7-8;Q7KZI7-11;Q7KZI7-6;Q7KZI7;Q7KZI7-12;Q7KZI7-4;Q7KZI7-5;Q7KZI7-2;Q7KZI7-7;Q7KZI7-10 Q7KZI7-14 MARK2 Serine/threonine-protein kinase MARK2 1 PSADLTNS(0.001)S(0.004)APS(0.791)PS(0.203)HK 88.57 0.0091537 7549600 48252 35479 27242 33463 29555 25213 35046 28771 21137 47495 TRUE FALSE 51946.21022 33717.16445 28150.23468 30728.96586 28394.5222 26172.49838 30444.4181 32531.46849 22975.45805 45945.24204 1.130611308 0.73385541 0.612690965 0.66881715 0.618007892 0.569645457 0.662623957 0.708048691 0.500061748 1 15.48762785 -4.763602993 3.254941604 0.652115492 1.209146082 0.545473817 0.125431711 0.238431694 3.78640158 0.028930858 0.347811629 1.72E-05 4.763602993 0.55703059 PSADLTNSSAPSPS(ph)HK ddPTM_A459_MK2206_30min_R2 1 PSADLTNSSAPSPSHK 16 0 Q7KZI7-14;E9PC69;Q7KZI7-13;E7ETY4;Q7KZI7-15;Q7KZI7-16;Q7KZI7-3;Q7KZI7-9;Q7KZI7-8;Q7KZI7-11;Q7KZI7-6;Q7KZI7;Q7KZI7-12;Q7KZI7-4;Q7KZI7-5;Q7KZI7-2;Q7KZI7-7;Q7KZI7-10 Q7KZI7-14 MARK2 Serine/threonine-protein kinase MARK2 1 PSADLTNSSAPS(0.238)PS(0.762)HK 102.5 0.003244 7197600 42256 32771 25853 30106 28609 18681 34188 29165 22312 43051 TRUE FALSE 45491.15185 31143.63979 26714.92612 27646.2435 27485.66691 19391.91855 29699.07453 32976.96564 24252.65743 41646.2494 1.092322898 0.747813795 0.641472558 0.663835133 0.659979405 0.465634213 0.713127231 0.791835186 0.582349138 1 15.34589895 -4.76355532 3.181457419 0.673635929 1.163911639 0.447805236 0.132319589 0.312963074 4.650229459 0.031964129 0.396130982 1.72E-05 4.76355532 0.49027571 PSALAQETSLGAPEPLSGEQLVGS(ph)PQDK ddPTM_A459_MK2206_30min_R1 1 PSALAQETSLGAPEPLSGEQLVGSPQDK 28 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 PSALAQETSLGAPEPLS(0.003)GEQLVGS(0.997)PQDK 136.2 1.42E-12 4419800 1424.6 1261.4 1546.9 1010.3 627.24 582.63 1056 962.43 1464.1 1773 TRUE FALSE 1303.430289 1179.282631 1441.900738 1088.113481 602.2557026 615.6180071 985.5561668 954.015576 1616.298434 1992.652625 0.65411817 0.59181546 0.723608681 0.546062804 0.30223818 0.308943967 0.494595071 0.478766627 0.811129052 1 10.96047452 -8.439557493 3.082410544 0.996527205 0.508614568 0.620193472 0.126924057 0.171732554 3.248789301 0.139640868 0.03737004 3.63E-09 8.439557493 -0.487912637 PSAPS(ph)PPPR ddPTM_A459_MK2206_30min_R1 1 PSAPSPPPR 9 0 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 PS(0.107)APS(0.893)PPPR 99.343 0.018892 12710000 4527 5281.6 4974.7 3381.7 3895.3 4300.3 5809.8 3772.1 6172.2 9593.6 TRUE FALSE 4141.954878 4937.76688 4637.031224 3642.15912 3740.141953 4543.77927 5422.238843 3739.120927 6813.822277 10782.1276 0.384150052 0.457958491 0.430066439 0.337795958 0.346883481 0.421417687 0.502891363 0.346788785 0.631955263 1 13.39635427 -8.591994562 2.890059191 0.999607602 0.406420451 0.927510275 0.051433914 0.080052994 1.63771732 0.051483449 0.013754887 2.56E-09 8.591994562 -0.593187151 down PSAPS(ph)PPPR ddPTM_A459_MK2206_30min_R2 2 PSAPSPPPR 9 0 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 PS(0.057)APS(0.943)PPPR;PS(0.065)APS(0.935)PPPR 95.483 0.022335 33733000 412730 227886 274640 264060 190218 185358 303290 236513 184044 376270 TRUE FALSE 444328.9261 216569.5126 283796.3605 242485.4533 182749.0856 192411.9286 263467.6587 267426.0612 200051.8144 363992.3407 1.220709549 0.594983708 0.779676737 0.666182846 0.502068492 0.528615323 0.72382748 0.734702441 0.549604462 1 18.47354857 -2.862775194 10.36978619 0.706421392 0.866459594 0 0.21659963 0 0 0.047680941 0 0.001371592 2.862775194 0.160038202 PSDSVSSTPAATST(ph)PSK ddPTM_A459_MK2206_30min_R1 2 PSDSVSSTPAATSTPSK 17 0 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 PSDSVSSTPAAT(0.001)S(0.221)T(0.754)PS(0.024)K;PSDSVSSTPAAT(0.001)S(0.023)T(0.953)PS(0.023)K 192.4 1.93E-07 6440600 6322.3 7711.1 6405.8 5388.8 3665 3965.8 4791.2 4419.8 5110.6 5915.3 TRUE FALSE 5784.555185 7209.105988 5970.992144 5803.84631 3519.015289 4190.340169 4471.58779 4381.158155 5641.865158 6648.132022 0.870102333 1.08438069 0.898145844 0.873004069 0.529323918 0.630303393 0.672608151 0.659005889 0.848639158 1 12.69873332 -6.043479415 5.340914191 0.698109671 0.954000274 0.371228213 0.132888795 0.182069988 12.75278936 0.038186703 0.051318434 9.05E-07 6.043479415 0.255890604 PSDSVSSTPAATST(ph)PSK ddPTM_A459_MK2206_30min_R2 2 PSDSVSSTPAATSTPSK 17 0 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 PSDSVSST(0.001)PAAT(0.052)S(0.292)T(0.65)PS(0.005)K;PSDSVSSTPAATS(0.031)T(0.968)PS(0.001)K 190.18 1.74E-07 20716000 184914 166163 151209 144938 135474 132620 171693 133483 120614 192030 TRUE FALSE 199071.158 157911.587 156250.2326 133096.1018 130154.6101 137666.947 149149.5029 150929.6864 131104.7877 185764.0768 1.071634309 0.850065253 0.841121896 0.716479225 0.700644669 0.741084872 0.802897446 0.812480481 0.705759638 1 17.50311201 -4.486707622 1.411919461 0.773812625 1.405489188 0.49648137 0.084403038 1.920599378 2.039281797 0.022925775 2.10167042 3.26E-05 4.486707622 0.631676563 PSDVGNLDDFAES(ph)DEDEAHGPGAPEAR ddPTM_A459_MK2206_30min_R1 1 PSDVGNLDDFAESDEDEAHGPGAPEAR 27 0 Q8N3D4;E9PIH6;A0A0U1RQH4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 PSDVGNLDDFAES(1)DEDEAHGPGAPEAR 136.12 2.87E-12 3577600 1252.8 1191.3 1425.2 847.09 999.28 1204 1333.7 1124.2 1586.1 2044.2 TRUE FALSE 1146.242781 1113.746153 1328.461395 912.3330186 959.4765616 1272.16944 1244.731306 1114.371238 1750.980771 2297.450929 0.498919375 0.48477473 0.578232761 0.39710664 0.417626575 0.553730843 0.541787984 0.485046807 0.762140662 1 11.16581833 -8.492834572 2.335443114 0.999445184 0.492632451 0.899336818 0.054544622 0.083802407 1.039269414 0.054735703 0.01502597 3.21E-09 8.492834572 -0.506812733 down PSGGFVISGVLS(ph)PDTISSK ddPTM_A459_MK2206_30min_R1 2 PSGGFVISGVLSPDTISSK 19 0 Q03188;H0Y8J2;H0Y9W1 Q03188 CENPC Centromere protein C 1 PSGGFVISGVLS(0.981)PDT(0.019)ISSK;PSGGFVISGVLS(1)PDTISSK 223.86 1.12E-19 22103000 9343.6 10508.5 8904.8 7739.5 7525.7 6734.1 7252.6 7624.3 8152.2 6849.3 TRUE FALSE 8548.877755 9824.39474 8300.366986 8335.597631 7225.935433 7115.378923 6768.792287 7557.641549 8999.650363 7697.842994 1.110554965 1.276252938 1.078271796 1.082848486 0.938696131 0.924334119 0.879310255 0.981786918 1.169113266 1 12.91023853 -5.776029357 1.835804136 0.975392347 1.188553853 0.461977406 0.085239529 0.294915177 2.027243814 0.027393863 0.055304662 1.67E-06 5.776029357 0.213161506 PSGGFVISGVLS(ph)PDTISSK ddPTM_A459_MK2206_30min_R2 2 PSGGFVISGVLSPDTISSK 19 0 Q03188;H0Y8J2;H0Y9W1 Q03188 CENPC Centromere protein C 1 PSGGFVISGVLS(0.999)PDT(0.001)ISSK;PSGGFVIS(0.001)GVLS(0.999)PDTISSK 139.46 0.00013217 12885200 73677 66827 57557 63442 61575 43892 76663 47203 46791 68319 TRUE FALSE 79317.76777 63508.46836 59475.92165 58258.58566 59157.25611 45562.34082 66597.05601 53372.59417 50860.7966 66089.75663 1.200152214 0.960942688 0.899926474 0.881507039 0.895104766 0.689400947 1.007675915 0.807577405 0.769571552 1 16.01213906 -2.936592305 0.921403468 0.853681088 11.29886902 0.54588844 0.091513441 39.37593058 1.432267564 0.028897908 794.1297149 0.001157198 2.936592305 10.44518793 PSLFVLS(ph)PIKEPAK ddPTM_A459_MK2206_30min_R2 1 PSLFVLSPIKEPAK 14 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 PSLFVLS(1)PIKEPAK 113.14 0.0018643 5157200 77918 35550 39805 43563 36825 18766 52033 39114 22492 58315 TRUE FALSE 83883.46199 33784.63869 41132.07883 40003.76355 35379.06547 19480.15328 45201.0046 44226.3341 24448.3135 56412.18633 1.486974135 0.598889015 0.729134634 0.709133366 0.627152886 0.345318176 0.801263123 0.783985464 0.433387094 1 15.78371923 -4.758921071 24.98393821 0.658774304 1.486975234 0.656742362 0.177071421 39.46155853 391413.2185 0.042246617 0.278656762 1.74E-05 4.758921071 0.828200931 PSLPAPES(ph)PGLPAHPSNPQLPEAR ddPTM_A459_MK2206_30min_R2 1 PSLPAPESPGLPAHPSNPQLPEAR 24 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 PS(0.004)LPAPES(0.996)PGLPAHPSNPQLPEAR 55.153 0.010334 9503300 7838.4 18906 11634 24592 20439 17864 25421 16571 16908 14172 TRUE FALSE 8438.513931 17967.15553 12021.87175 22582.75493 19636.46216 18543.82704 22083.19216 18736.8866 18378.62728 13709.5688 0.61552001 1.310555846 0.876896417 1.647225763 1.432318 1.352619277 1.610786779 1.36670138 1.340569317 1 13.74289558 -5.750566112 24.99826946 1.417211966 0.971947171 0.45068816 0.22978257 188.9963886 434509.662 0.058571099 0.100179797 1.78E-06 5.750566112 -0.445264795 PSMS(ph)PTPLDR ddPTM_A459_MK2206_30min_R1 3 PSMSPTPLDR 10 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 PS(0.001)MS(0.981)PT(0.019)PLDR;PS(0.021)MS(0.847)PT(0.132)PLDR;PS(0.001)MS(0.975)PT(0.024)PLDR 155.97 0.00051655 140046000 10939.1 12124 10927.5 8254.8 7537.7 8525.8 10494.8 8562.5 10519.4 12995 TRUE FALSE 10008.6721 11334.7254 10185.77175 8890.586126 7237.457448 9008.523428 9794.711041 8487.638965 11612.92927 14604.91871 0.685294612 0.776089592 0.69742064 0.608739172 0.495549314 0.616814349 0.670644681 0.581149347 0.795138234 1 13.83416671 -8.554384044 3.648435257 0.999615493 0.64276195 0.710717557 0.071468133 0.133404217 5.196498607 0.077485443 0.020394434 2.79E-09 8.554384044 -0.356853543 PSMS(ph)PTPLDR ddPTM_A459_MK2206_30min_R2 3 PSMSPTPLDR 10 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 PSMS(0.901)PT(0.098)PLDR;PS(0.004)MS(0.89)PT(0.106)PLDR;PSMS(0.5)PT(0.5)PLDR 145.28 0.00090728 133647500 168905 137350 138103 150859 122745 122788 148313 122421 105281 141890 TRUE FALSE 181836.4967 130529.3987 142707.2851 138533.3371 117925.4146 127460.7834 128839.3249 138421.845 114438.1511 137260.1409 1.324758196 0.950963607 1.039684821 1.00927579 0.859138085 0.928607406 0.938650682 1.008463521 0.833731849 1 17.06655322 -2.526288782 1.363452969 0.944462004 200 0.738081244 0.065702223 380.7783082 1.785841777 0.018477875 235947.1959 0.002976537 2.526288782 199.055538 PSMSPT(ph)PLDR ddPTM_A459_MK2206_30min_R1 1 PSMSPTPLDR 10 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 PS(0.001)MS(0.277)PT(0.722)PLDR 152.07 0.001515 49025000 3938.3 4592.1 4747.9 3263.6 2971.6 3398.1 4425.5 3026.1 4158.7 5338.6 TRUE FALSE 3603.326904 4293.153455 4425.625776 3514.963037 2853.23488 3590.497485 4130.28297 2999.643127 4591.011747 5999.986072 0.600555878 0.715527237 0.737606008 0.585828533 0.47554025 0.598417637 0.688382093 0.499941682 0.765170401 1 12.55074344 -8.557584274 5.748663099 0.999956217 0.617371638 0.689675179 0.080456383 0.141464716 19.44065893 0.082605183 0.021424811 2.77E-09 8.557584274 -0.382584578 PSMSPT(ph)PLDR ddPTM_A459_MK2206_30min_R2 2 PSMSPTPLDR 10 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 PSMS(0.252)PT(0.748)PLDR;PSMS(0.285)PT(0.714)PLDR 164.65 0.0008697 142277000 164411 124903 112655 116142 96236 82396 128831 112501 81329 144332 TRUE FALSE 176998.4326 118700.4986 116410.8615 106652.8271 92457.29109 85531.63752 111915.3349 127205.267 88402.84941 139622.4587 1.267693137 0.850153333 0.833754559 0.763865843 0.662194979 0.61259226 0.801556827 0.911065943 0.633156372 1 17.0911715 -4.195012678 1.387046456 0.759938443 2.726971048 0.61231001 0.115934935 3.574691785 1.97017732 0.032745809 14.68947096 6.38E-05 4.195012678 1.967032606 PSPGTPTS(ph)PSNLTSGLK ddPTM_A459_MK2206_30min_R1 1 PSPGTPTSPSNLTSGLK 17 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 PSPGTPT(0.082)S(0.836)PS(0.082)NLTSGLK 231.41 1.72E-16 9085000 2721 3110.8 2859.1 2225.6 1901.3 2126.9 2407.6 2418.6 3158.9 4170.8 TRUE FALSE 2489.564661 2908.286355 2665.032258 2397.016098 1825.567195 2247.32324 2246.993397 2397.454435 3487.278959 4687.510192 0.531105973 0.620433073 0.568538979 0.511362322 0.389453488 0.479427915 0.479357549 0.511455834 0.743951227 1 12.19460611 -8.524362296 2.402266557 0.99858337 0.509581952 0.878310414 0.057666882 0.104405876 1.416804045 0.063763315 0.017404224 2.99E-09 8.524362296 -0.489001418 PSPGTPTS(ph)PSNLTSGLK ddPTM_A459_MK2206_30min_R2 3 PSPGTPTSPSNLTSGLK 17 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 PSPGTPT(0.257)S(0.73)PS(0.012)NLT(0.001)SGLK;PSPGT(0.024)PT(0.233)S(0.735)PS(0.004)NLT(0.004)S(0.001)GLK;PSPGTPT(0.06)S(0.436)PS(0.038)NLT(0.369)S(0.096)GLK 137.79 0.00051058 14473800 141087 102311 103424 105714 88634 65188 120102 88860 68851 152639 TRUE FALSE 151888.7292 97230.38451 106872.1045 97076.82804 85153.78381 67668.77502 104332.4631 100474.3071 74839.53553 147658.4019 1.028649418 0.658481896 0.723779366 0.657441952 0.57669447 0.458279205 0.706579929 0.680450999 0.506842378 1 17.17190392 -4.759559737 5.754387786 0.646142857 1.045349683 0.375619422 0.139903515 0.143214214 16.51791362 0.03297328 0.226550829 1.74E-05 4.759559737 0.399206826 PSPGTPTSPS(ph)NLTSGLK ddPTM_A459_MK2206_30min_R1 1 PSPGTPTSPSNLTSGLK 17 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 PSPGT(0.001)PT(0.044)S(0.407)PS(0.548)NLTSGLK 156.5 4.59E-05 11919000 2365.5 2864.3 2785.8 2355.1 1604.4 1753.7 2726.9 2407.5 3335.4 3783.4 TRUE FALSE 2164.301803 2677.833549 2596.707658 2536.49021 1540.493351 1852.992978 2544.993477 2386.451481 3682.126766 4252.116155 0.508994045 0.62976491 0.610685965 0.596524205 0.362288633 0.435781364 0.598523978 0.561238544 0.865951595 1 12.05396529 -8.357763317 2.389762071 1.000458126 0.533244307 0.803745452 0.079509692 0.129209268 1.421923046 0.08355167 0.023319986 4.39E-09 8.357763317 -0.467213819 PSPGTPTSPS(ph)NLTSGLK ddPTM_A459_MK2206_30min_R2 1 PSPGTPTSPSNLTSGLK 17 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 PSPGTPT(0.025)S(0.151)PS(0.521)NLT(0.151)S(0.151)GLK 150.51 0.00025393 6857200 50692 34646 36718 31769 26598 20958 41096 30385 22178 51318 TRUE FALSE 54573.0185 32925.53002 37942.15979 29173.37108 25553.62888 21755.57138 35700.04583 34356.42383 24107.00235 49643.49786 1.099298415 0.663239527 0.764292635 0.587657444 0.514742715 0.438236069 0.719128332 0.692062915 0.485602413 1 15.59931715 -2.902583316 10.37402317 0.674226146 0.848303529 0 0.205324476 0 0 0.046190366 0 0.001251459 2.902583316 0.174077383 PSPRTSFQEEK ddPTM_A459_MK2206_30min_R1 2 PSPRTSFQEEK 11 1 Q6ZVK1 Q6ZVK1 TMEM179 Transmembrane protein 179 0 ; 107.55 0.0083457 4380730 4535.57 772.95 187.59 219.72 6065.55 7649.49 5960.19 4154.32 388.22 360.01 FALSE TRUE 4149.795954 722.6308145 174.8569135 236.6428725 5823.946299 8082.597513 5562.5966 4117.999218 428.5768583 404.6107567 10.25626701 1.785990121 0.432160813 0.5848655 14.39394826 19.97622994 13.74801957 10.17768102 1.059232487 1 8.660390865 -3.816016551 15.05183411 7.787279966 12.48430295 0 6.876632331 0 0 1.744012894 0 0.000152751 3.816016551 4.697022985 PSPSTTPLPDS(ph)SPSR ddPTM_A459_MK2206_30min_R2 1 PSPSTTPLPDSSPSR 15 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 PSPSTTPLPDS(0.494)S(0.494)PS(0.012)R 85.287 0.020874 3170800 21397 17985 20053 18698 16184 14676 22098 16195 17606 21553 TRUE FALSE 23035.17077 17091.89105 20721.55701 17170.31359 15548.53484 15234.50546 19196.50606 18311.74211 19137.33806 20849.72738 1.1048188 0.819765685 0.99385266 0.823527007 0.745742837 0.730681279 0.920707773 0.878272496 0.917869942 1 14.3477409 PSPSTTPLPDSS(ph)PSR ddPTM_A459_MK2206_30min_R2 1 PSPSTTPLPDSSPSR 15 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 PSPSTTPLPDS(0.204)S(0.792)PS(0.004)R 140.77 0.00034569 0 18520 21966 18077 21781 17579 14393 22672 16840 15046 20731 TRUE FALSE 19937.90544 20875.20038 18679.67816 20001.42263 16888.76013 14940.7357 19695.13917 19041.04582 16354.67388 20054.54917 0.994183677 1.04092095 0.931443435 0.997350898 0.842141102 0.745004815 0.98207838 0.949462671 0.815509426 1 14.29164191 -6.249288295 24.25339575 0.883956753 0.990290103 0.295048336 0.076952954 667.8642486 1333046.211 0.02337397 0.029922951 5.63E-07 6.249288295 0.10633335 PSQCSEFIQQSSMKS(ph)PLYLVSR ddPTM_A459_MK2206_30min_R1 2 PSQCSEFIQQSSMKSPLYLVSR 22 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 PSQCSEFIQQS(0.003)S(0.106)MKS(0.888)PLY(0.002)LVSR;PSQCSEFIQQS(0.401)S(0.093)MKS(0.504)PLYLVS(0.001)R 101.71 6.26E-05 31234000 4525.4 4978.8 4420.5 3948.7 3093.3 3224.7 3721.1 3752 3691.4 3180.4 TRUE FALSE 4140.490966 4654.679215 4120.448776 4252.829558 2970.087311 3407.279727 3472.872209 3719.19666 4075.13424 3574.411963 1.158369827 1.302222369 1.152762698 1.189798379 0.83093033 0.953242033 0.971592599 1.040505879 1.140085217 1 11.8034902 -6.134637839 8.071344024 0.988940054 1.207019793 0.617133253 0.081604929 0.200318297 12.21794409 0.025324096 0.032773759 7.33E-07 6.134637839 0.218079739 PSQCSEFIQQSSMKS(ph)PLYLVSR ddPTM_A459_MK2206_30min_R2 2 PSQCSEFIQQSSMKSPLYLVSR 22 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 PSQCSEFIQQS(0.054)S(0.04)MKS(0.883)PLY(0.023)LVSR;PSQCSEFIQQSS(0.003)MKS(0.98)PLY(0.016)LVSR 100.95 6.94E-05 24391000 41862 44517 31503 41704 34771 33983 46014 35597 24388 44249 TRUE FALSE 45066.98691 42306.35051 32553.2943 38296.6498 33405.71583 35276.24688 39972.30653 40249.65012 26509.22416 42805.15875 1.052840083 0.988347006 0.760499324 0.894673701 0.780413315 0.824112044 0.933819841 0.94029905 0.619299751 1 15.38549706 -5.088147351 5.117023477 0.844434264 1.039216233 0.325919091 0.103215326 0.220556387 9.331226176 0.025232085 0.07325121 8.16E-06 5.088147351 0.194781969 PSQLSTPAAS(ph)PSASEPR ddPTM_A459_MK2206_30min_R2 1 PSQLSTPAASPSASEPR 17 0 K7EL01;Q5XUX1;Q5XUX1-2 K7EL01 FBXW9 F-box/WD repeat-containing protein 9 1 PSQLST(0.003)PAAS(0.872)PS(0.115)AS(0.011)EPR 119.37 0.0014442 0 6960.1 7130.1 6559.1 9916.3 7490.6 11602 9179.5 7417.3 8695.1 6169.9 TRUE FALSE 7492.970607 6776.029602 6777.77712 9106.106569 7196.481407 12043.52224 7974.220623 8386.766577 9451.384081 5968.576668 1.25540326 1.135284001 1.135576788 1.525674725 1.205728234 2.017821486 1.336033877 1.40515353 1.583523947 1 12.54317122 -5.758633875 24.9920566 1.466106034 1.171407557 0.181117878 0.252399452 108.7393504 968651.7165 0.066784479 0.109398135 1.74E-06 5.758633875 -0.294698476 PSQVNGAPGS(ph)PTEPAGQK ddPTM_A459_MK2206_30min_R2 1 PSQVNGAPGSPTEPAGQK 18 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 PSQVNGAPGS(0.989)PT(0.011)EPAGQK 216.9 6.36E-40 0 22637 15771 14147 11662 12334 9143.2 18351 12267 11539 20002 TRUE FALSE 24370.10612 14987.83507 14618.65392 10709.1773 11849.70519 9491.150883 15941.49166 13870.33902 12542.64136 19349.33638 1.259480204 0.774591685 0.755511901 0.553464837 0.612408868 0.490515576 0.823877953 0.71683797 0.648220751 1 14.23999647 -4.595330394 1.957495837 0.677652266 1.684041226 0.592280399 0.137349317 0.959150099 2.560609987 0.035713986 2.070920651 2.54E-05 4.595330394 1.00638896 PSS(ph)PGGLPEEDSVLFNK ddPTM_A459_MK2206_30min_R2 2 PSSPGGLPEEDSVLFNK 17 0 A0A0U1RQY6;A0A0C4DG54;Q5R372-2;Q5R372-4;Q5R372;Q5R372-3 A0A0U1RQY6 RABGAP1L Rab GTPase-activating protein 1-like 1 PS(0.001)S(0.999)PGGLPEEDSVLFNK;PS(0.004)S(0.996)PGGLPEEDSVLFNK 290.63 8.94E-76 8822100 64754 36431 46916 38047 34248 21623 44931 40041 29398 55212 TRUE FALSE 69711.61603 34621.88952 48480.15602 34938.43839 32903.25144 22445.87842 39031.50573 45274.49618 31954.9849 53410.43696 1.305205873 0.648223297 0.907690683 0.65415002 0.616045352 0.420252664 0.730784243 0.847671331 0.598291022 1 15.70483407 PSS(ph)SPVIFAGGQDR ddPTM_A459_MK2206_30min_R1 3 PSSSPVIFAGGQDR 14 0 Q15366;Q15366-2;Q15366-6;Q15366-3;H3BSS4 Q15366 PCBP2 Poly(rC)-binding protein 2 1 PS(0.011)S(0.595)S(0.394)PVIFAGGQDR;PS(0.007)S(0.497)S(0.497)PVIFAGGQDR;PS(0.014)S(0.884)S(0.102)PVIFAGGQDR 161.49 0.00028276 108952000 6882.4 6554.7 7616.8 4806.3 5524.4 6343.1 7748.2 5759.8 8351.2 10742.1 TRUE FALSE 6297.015739 6127.987839 7099.792838 5176.482059 5304.35145 6702.24084 7231.331715 5709.442676 9219.337125 12072.91245 0.521582159 0.507581569 0.58807623 0.428768293 0.439359721 0.555146976 0.598971603 0.47291345 0.7636382 1 13.55948613 -8.507679919 2.817277055 0.999095731 0.514863527 0.887791112 0.05538389 0.076596872 1.442083918 0.055577308 0.014926758 3.11E-09 8.507679919 -0.484232204 PSS(ph)SPVIFAGGQDR ddPTM_A459_MK2206_30min_R2 1 PSSSPVIFAGGQDR 14 0 Q15366;Q15366-2;Q15366-6;Q15366-3;H3BSS4 Q15366 PCBP2 Poly(rC)-binding protein 2 1 PS(0.022)S(0.489)S(0.489)PVIFAGGQDR 166.64 0.00022909 86659000 291120 182510 166970 197040 170360 142320 232060 170360 125720 310040 TRUE FALSE 313408.371 173446.8188 172536.6965 180941.2017 163670.8104 147736.0873 201590.2432 192626.6369 136654.8984 299923.4202 1.044961313 0.578303684 0.575269168 0.603291339 0.545708669 0.492579363 0.672139052 0.642252735 0.455632635 1 18.19423466 -10.31185539 5.190994492 1.000000166 0.615881114 0.349221538 0.153947134 48064588.69 31826604.21 96.43772804 0.036347382 4.88E-11 10.31185539 -0.384119051 PSSCLLIPSPENNS(ph)ERLLVDTRR ddPTM_A459_MK2206_30min_R1 1 PSSCLLIPSPENNSERLLVDTRR 23 2 Q9N2K0 Q9N2K0 HERV-H_2q24.3 provirus ancestral Env polyprotein;Surface protein;Transmembrane protein 1 PSSCLLIPS(0.016)PENNS(0.964)ERLLVDT(0.02)RR 58.998 0.015045 24565000 429.71 269.6 382.04 365.18 397.56 448.12 442.3 214.97 287.47 292.82 TRUE FALSE 393.160908 252.048991 356.1081892 393.3062269 381.7243434 473.4921671 412.794974 213.09054 317.3535352 329.0967523 1.19466663 0.765881125 1.082077495 1.195108199 1.159915255 1.438762807 1.254327097 0.647501194 0.964316825 1 8.362367979 -7.74880584 24.99360012 0.854431707 1.15053696 0.342126199 0.180720952 257.2389206 508911.6536 0.092324122 0.052846124 1.78E-08 7.74880584 0.296105253 PSSIPAPAEAEAWS(ph)PR ddPTM_A459_MK2206_30min_R1 2 PSSIPAPAEAEAWSPR 16 0 D3YTB5;P51617-4;P51617-2;P51617-3;P51617;H7C1F0;F8WAB6 D3YTB5 IRAK1 Interleukin-1 receptor-associated kinase 1 1 PSSIPAPAEAEAWS(1)PR;PSSIPAPAEAEAWS(1)PR 169.64 1.10E-05 11903800 6185.6 6282 5321.3 4260.2 3584.1 3907.9 4893.7 3665.3 4932.5 5805.2 TRUE FALSE 5659.482238 5873.040658 4960.104982 4588.321342 3441.337708 4129.161921 4567.250202 3633.254669 5445.251026 6524.392003 0.867434427 0.900166737 0.760240185 0.703256539 0.527457226 0.632880722 0.700026945 0.556872528 0.834598998 1 12.67162775 -5.478453728 2.600421422 0.678563748 0.885243426 0.198886836 0.130104672 0.35337261 4.680830448 0.034697831 0.082773375 3.32E-06 5.478453728 0.206679679 PSSIPAPAEAEAWS(ph)PR ddPTM_A459_MK2206_30min_R2 2 PSSIPAPAEAEAWSPR 16 0 D3YTB5;P51617-4;P51617-2;P51617-3;P51617;H7C1F0;F8WAB6 D3YTB5 IRAK1 Interleukin-1 receptor-associated kinase 1 1 PSSIPAPAEAEAWS(1)PR;PSSIPAPAEAEAWS(1)PR 197.75 1.03E-06 8153100 41791 30798 29197 30937 28547 23880 33212 25790 20704.1 36553 TRUE FALSE 44990.55109 29268.6161 30170.41341 28409.34814 27426.10134 24788.77013 28851.22451 29160.84155 22504.90519 35360.2786 1.272347189 0.827725834 0.853228951 0.803425461 0.775618927 0.701034356 0.815921866 0.824677935 0.636445924 1 15.10984202 -4.752434875 4.181153768 0.793528653 1.325421254 0.707929547 0.090217631 0.126076785 4.288665246 0.021392215 0.209426376 1.77E-05 4.752434875 0.531892602 PSSS(ph)PVIFAGGQDR ddPTM_A459_MK2206_30min_R2 1 PSSSPVIFAGGQDR 14 0 Q15366;Q15366-2;Q15366-6;Q15366-3;H3BSS4 Q15366 PCBP2 Poly(rC)-binding protein 2 1 PSS(0.232)S(0.768)PVIFAGGQDR 141.06 0.00055737 98409000 201470 137580 130650 142530 115210 121460 188140 154510 112390 199230 TRUE FALSE 216894.6981 130747.9773 135005.8058 130884.8431 110686.2765 126082.2454 163436.992 174704.9875 122165.479 192729.1414 1.125386107 0.678402738 0.70049503 0.679112884 0.574310017 0.654193987 0.848013906 0.906479354 0.63387134 1 17.5562152 -13.21455496 20.00288055 0.995651688 0.762272333 0 0.172562149 0 0 0 0.038909707 6.10E-14 13.21455496 -0.233379355 PSSTTPTPLVS(ph)ETGGNSPSDKVDNELK ddPTM_A459_MK2206_30min_R2 2 PSSTTPTPLVSETGGNSPSDKVDNELK 27 1 A0A3B3IRW6;Q2KHR3-2;Q2KHR3;H0YCQ7 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 PSSTT(0.001)PT(0.007)PLVS(0.489)ET(0.423)GGNS(0.056)PS(0.023)DKVDNELK;PSSTT(0.001)PT(0.015)PLVS(0.47)ET(0.423)GGNS(0.075)PS(0.017)DKVDNELK 69.071 0.00044485 17623100 161134 85309 112592 77543 71656 38339 118404 94553 44985 152905 TRUE FALSE 173470.5429 81072.67911 116345.7611 71207.48885 68842.4254 39798.01751 102857.4126 106911.4017 48897.71399 147915.7224 1.172766087 0.548100485 0.786567913 0.481405815 0.465416551 0.269058737 0.695378496 0.722785922 0.330578205 1 17.17441588 -2.825208187 1.480855341 0.5615681 199.9999998 0.391544481 0.212441828 457.0031415 4.009181891 0.05760316 306843.8632 0.001495519 2.825208187 199.4384317 PSSTTPTPLVSETGGNS(ph)PSDKVDNELK ddPTM_A459_MK2206_30min_R1 1 PSSTTPTPLVSETGGNSPSDKVDNELK 27 1 A0A3B3IRW6;Q2KHR3-2;Q2KHR3;H0YCQ7 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 PSSTTPTPLVSETGGNS(0.914)PS(0.086)DKVDNELK 141.91 8.79E-13 11018000 1256.6 2119.1 1894.1 1393.3 792.4 796.7 990.5 1114.3 2167.1 2342.3 TRUE FALSE 1149.719571 1981.146205 1765.533769 1500.612207 760.8370301 841.8084655 924.4255523 1104.557793 2392.3778 2632.481807 0.436743596 0.752577358 0.670672733 0.570037067 0.289018913 0.319777505 0.351161231 0.419588006 0.90879177 1 11.36220785 -8.32380215 4.900213622 0.981690803 0.479295823 0.641101981 0.143398104 0.159909176 7.545939086 0.156576702 0.041794472 4.74E-09 8.32380215 -0.502394981 PSSTTPTPLVSETGGNS(ph)PSDKVDNELK ddPTM_A459_MK2206_30min_R2 1 PSSTTPTPLVSETGGNSPSDKVDNELK 27 1 A0A3B3IRW6;Q2KHR3-2;Q2KHR3;H0YCQ7 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 PSSTTPTPLVS(0.105)ET(0.105)GGNS(0.744)PS(0.046)DKVDNELK 100.39 6.57E-07 5744100 29249 19195 20343 17236 13036 7215.5 23960 21044 10436 30269 TRUE FALSE 31488.32593 18241.80421 21021.22547 15827.76366 12524.14114 7490.090909 20814.02322 23794.52305 11343.70442 29281.32501 1.075372304 0.622984247 0.717905541 0.540541238 0.427717705 0.25579754 0.710829282 0.812617702 0.387404068 1 14.83769322 -9.946669026 20.84371513 1 0.610055956 0.21100201 0.221958763 0 0 0.22052854 0.053486027 1.13E-10 9.946669026 -0.389944044 PSSTTPTPLVSETGGNSPS(ph)DKVDNELK ddPTM_A459_MK2206_30min_R1 1 PSSTTPTPLVSETGGNSPSDKVDNELK 27 1 A0A3B3IRW6;Q2KHR3-2;Q2KHR3;H0YCQ7 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 PSSTTPTPLVS(0.015)ET(0.25)GGNS(0.209)PS(0.526)DKVDNELK 92.518 8.35E-06 9470400 2718.9 3141.2 2960.3 2534.1 1346.9 1280 2039.3 2038.4 3465.5 5140.6 TRUE FALSE 2487.643277 2936.707309 2759.363084 2729.276821 1293.250121 1352.472494 1903.262018 2020.578484 3825.751126 5777.456338 0.430577599 0.508304544 0.477608643 0.472401116 0.223844205 0.234094801 0.329429061 0.349734964 0.662186073 1 12.49621874 -8.538793426 2.725280668 0.998421497 0.377499048 0.81334139 0.093800896 0.125289284 2.284465872 0.105035944 0.028258757 2.89E-09 8.538793426 -0.620922449 down PSSTTPTPLVSETGGNSPS(ph)DKVDNELK ddPTM_A459_MK2206_30min_R2 1 PSSTTPTPLVSETGGNSPSDKVDNELK 27 1 A0A3B3IRW6;Q2KHR3-2;Q2KHR3;H0YCQ7 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 PSSTTPTPLVSETGGNS(0.029)PS(0.971)DKVDNELK 127.54 3.76E-12 11443000 27308 15244 18371 13122 13607 6725.2 19705 15869 10095 25845 TRUE FALSE 29398.72148 14487.00513 18983.47997 12049.89062 13072.72081 6981.132199 17117.70983 17943.13279 10973.04485 25001.67977 1.175869852 0.579441272 0.759288182 0.481963242 0.5228737 0.279226527 0.68466239 0.71767709 0.438892305 1 14.60973741 PST(ph)PAEEDEDDPEQEK ddPTM_A459_MK2206_30min_R2 1 PSTPAEEDEDDPEQEK 16 0 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 PS(0.002)T(0.998)PAEEDEDDPEQEK 269.05 9.56E-111 0 38881 16026 21389 13107 11390 6092.5 21766 17473 8153.7 32343 TRUE FALSE 41857.75925 15230.17214 22102.09858 12036.11617 10942.77137 6324.354357 18908.09805 19756.78109 8862.894087 31287.65056 1.337836447 0.486779029 0.706416052 0.384692233 0.349747302 0.202135803 0.604331029 0.631456205 0.28327132 1 14.93330571 PST(ph)PLDGVSTPKPLSK ddPTM_A459_MK2206_30min_R2 1 PSTPLDGVSTPKPLSK 16 1 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 PS(0.038)T(0.962)PLDGVSTPKPLSK 99.273 0.0091892 8435500 83453 55979 60225 54775 44815 29326 71072 50971 36586 88384 TRUE FALSE 89842.22584 53199.16426 62232.87144 50299.70728 43055.33792 30442.02148 61740.16103 57633.08471 39768.18415 85500.03732 1.050785809 0.622212176 0.727869524 0.588300413 0.503570984 0.356046879 0.722106831 0.674070872 0.465124758 1 16.38363743 -10.41897835 22.44884286 1 0.627189483 0.274006663 0.178151463 0 0 0.17445892 0.042312503 3.81E-11 10.41897835 -0.372810517 PSTQPRPDS(ph)WGEDNWEGLETDSR ddPTM_A459_MK2206_30min_R1 2 PSTQPRPDSWGEDNWEGLETDSR 23 1 H0YDH0;E9PPN3;E9PS17;Q96KG9-3;Q96KG9-2;Q96KG9 H0YDH0 SCYL1 N-terminal kinase-like protein 1 PS(0.006)T(0.005)QPRPDS(0.982)WGEDNWEGLET(0.008)DSR;PSTQPRPDS(1)WGEDNWEGLETDSR 91.091 8.51E-05 8183100 1151.87 1350.4 1145.09 1208.29 1042.96 752.64 867.11 1389.59 884.87 1186.7 TRUE FALSE 1053.897408 1262.488715 1067.364481 1301.352705 1001.416695 795.2538264 809.266674 1377.440961 976.855403 1333.717355 0.790195467 0.946593901 0.800292863 0.975733502 0.750846265 0.596268635 0.606775244 1.032783262 0.7324306 1 10.38123724 -4.431948994 15.92411965 0.818372162 3.61E-05 0.00247299 0.150512455 794394.3313 1822501.022 0.038487254 22714533.73 3.70E-05 4.431948994 -0.818336105 PSTQPRPDS(ph)WGEDNWEGLETDSR ddPTM_A459_MK2206_30min_R2 2 PSTQPRPDSWGEDNWEGLETDSR 23 1 H0YDH0;E9PPN3;E9PS17;Q96KG9-3;Q96KG9-2;Q96KG9 H0YDH0 SCYL1 N-terminal kinase-like protein 1 PS(0.004)T(0.004)QPRPDS(0.991)WGEDNWEGLET(0.001)DSR;PST(0.001)QPRPDS(0.998)WGEDNWEGLETDSR 73.675 0.0018746 9643400 14609.7 13221 13525.5 13784.8 13020.5 8891.6 15644.4 10614.4 10317 15997.4 TRUE FALSE 15728.22986 12564.46437 13976.43342 12658.53774 12509.24975 9229.976069 13590.27149 12001.73852 11214.35401 15475.40615 1.01633713 0.811898844 0.903138392 0.81797774 0.80833095 0.59642868 0.878185125 0.775536255 0.724656523 1 13.91768965 -1.522878745 0.763797521 0.788569004 42.08224714 0.24557087 0.103045753 538.494388 2.19243776 0.036583974 38325.41446 0.03 1.522878745 41.29367814 PT(ph)LS(ph)ALPS(ph)PLVTS(ph)GK ddPTM_A459_MK2206_30min_R1 1 PTLSALPSPLVTSGK 15 0 A0A0G2JPI0;A0A0G2JNA7;A0A0A0MS20;A0A0G2JPX5;A0A0G2JPU4;A0A0G2JMH7;A0A0G2JML1;A0A0G2JNE9;A0A0G2JQ20;A0A0G2JP25;A0A0G2JQ10;A0A0G2JM84;A0A0G2JM57;A0A0A0MSZ8;A0A0G2JP84;A0A0G2JPC7;A0A0G2JM38;A0A0G2JM43;C9JST2;A0A0G2JPA9;A8MUE1;A0A0G2JNL1;Q8NHJ6-2;Q8NHJ6;Q8NHJ6-3 A0A0G2JPI0 LILRB4 Leukocyte immunoglobulin-like receptor subfamily B member 4 4 PT(1)LS(1)ALPS(0.997)PLVT(0.063)S(0.94)GK 72.096 0.034121 0 851.92 1169.7 1027.4 911.85 726.57 807.21 892.42 827.27 1012 893.67 TRUE FALSE 779.4597304 1093.552317 957.6629505 982.080845 697.6291784 852.9135326 832.8882901 820.0372656 1117.201021 1004.384586 0.776057041 1.088778474 0.953482325 0.977793624 0.694583716 0.849190185 0.829252361 0.816457437 1.112323941 1 9.972096079 -11.10230148 4.400480777 1.001450233 0.897155748 0.052578569 0.12720687 0.001850254 0.000176839 0.125914935 0.0301206 7.90E-12 11.10230148 -0.104294485 PTLLANGGHGVEGS(ph)DTTGSPTEFLEEK ddPTM_A459_MK2206_30min_R2 1 PTLLANGGHGVEGSDTTGSPTEFLEEK 27 0 E7EVA0;A0A0J9YW37;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 PTLLANGGHGVEGS(0.584)DT(0.197)T(0.197)GS(0.014)PT(0.008)EFLEEK 55.986 0.005924 3475200 11091 9125.5 10319 8895.4 8367.8 6421 9498.1 7615.8 6202 10228 TRUE FALSE 11940.13549 8672.34094 10663.03031 8168.617365 8039.238127 6665.355654 8250.988061 8611.211209 6741.438749 9894.261198 1.206773831 0.876502122 1.077698486 0.825591442 0.812515252 0.673658752 0.83391654 0.870323821 0.681348371 1 13.27237627 -5.806309358 6.504147247 0.802252929 1.035913909 0.472557196 0.115222395 0.160212001 16.52409429 0.03080446 0.046770275 1.56E-06 5.806309358 0.23366098 PTMT(ph)IPGY(ph)VEPTAVATPPT(ph)TTT(ph)K ddPTM_A459_MK2206_30min_R1 1 PTMTIPGYVEPTAVATPPTTTTK 23 0 Q14118 Q14118 DAG1 Dystroglycan;Alpha-dystroglycan;Beta-dystroglycan 4 PT(0.133)MT(0.884)IPGY(0.976)VEPT(0.343)AVAT(0.343)PPT(0.349)T(0.31)T(0.31)T(0.353)K 45.047 0.023089 3936600 821.79 738.66 920.39 831.61 1023.1 907.05 798.61 871.97 540.1 769.21 TRUE FALSE 751.8924451 690.5730997 857.9164912 895.6607463 982.3477605 958.4063871 745.336184 864.3464582 596.2453278 864.505542 0.869736987 0.798807025 0.992378243 1.036038178 1.136311698 1.108617979 0.862153159 0.999815983 0.689695206 1 9.755731402 -10.71603007 4.338247413 1.000014733 0.953376048 0.011252022 0.132970919 2.00E-05 3.71E-06 0.135686526 0.032898421 1.92E-11 10.71603007 -0.046638685 PTS(ph)SPAKGPPQK ddPTM_A459_MK2206_30min_R1 2 PTSSPAKGPPQK 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 PT(0.004)S(0.513)S(0.483)PAKGPPQK;PTS(0.5)S(0.5)PAKGPPQK 182.25 0.00049456 66752000 13036.9 15189.6 14224 11598.4 7075 7696.4 10925.1 9176.6 9965 18234.3 TRUE FALSE 11928.0432 14200.75428 13258.51451 12491.71078 6793.187768 8132.163517 10196.30651 9096.369954 11000.89741 20493.30275 0.582045917 0.692946103 0.646968167 0.609550883 0.331483307 0.396820543 0.497543351 0.443870374 0.536804513 1 14.32286489 -11.3982031 5.232315215 1.10587676 0.5245083 0.637279664 0.107170016 0.070681941 0.001684209 0.055411251 0.028858598 4.00E-12 11.3982031 -0.58136846 PTS(ph)SPAKGPPQK ddPTM_A459_MK2206_30min_R2 1 PTSSPAKGPPQK 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 PT(0.001)S(0.745)S(0.254)PAKGPPQK 165.51 0.0024138 23615000 115330 76623 74039 67156 64205 42211 92600 70052 46520 93555 TRUE FALSE 124159.7535 72818.01324 76507.42331 61669.13998 61683.9891 43817.36918 80441.50877 79208.03692 50566.22551 90502.30801 1.37189599 0.804598411 0.845364334 0.681409583 0.681573658 0.484157478 0.888833783 0.875204607 0.558728574 1 16.46566696 -4.220022119 1.546711892 0.733475671 3.267268582 0.597155934 0.150875904 3.652974409 2.433785798 0.041407575 21.67636949 6.03E-05 4.220022119 2.533792911 PTSS(ph)PAKGPPQK ddPTM_A459_MK2206_30min_R2 1 PTSSPAKGPPQK 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 PT(0.015)S(0.063)S(0.922)PAKGPPQK 111.65 0.032138 0 24011 12626 16828 13702 13915 9612.8 18599 14590 9499.5 22280 TRUE FALSE 25849.30062 11999.0112 17389.03712 12582.50277 13368.62718 9978.62184 16156.92896 16496.96309 10325.74934 21553.00542 1.199336246 0.556721022 0.806803357 0.583793421 0.620267425 0.462980528 0.749636936 0.765413582 0.479086287 1 14.39560144 -4.754841794 24.99035741 0.658218833 1.199337163 0.50540663 0.156916384 173.1449251 655778.8691 0.036433787 0.341396366 1.76E-05 4.754841794 0.54111833 PTTQQS(ph)PQDEQEK ddPTM_A459_MK2206_30min_R2 1 PTTQQSPQDEQEK 13 0 Q96QK1;I3L4S0;A0A1W2PP10;A0A3B3ITD4 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 1 PT(0.005)T(0.003)QQS(0.993)PQDEQEK 184.87 0.00012445 5030900 38625 29054 32778 28690 23529 20497 36564 28892 19933 33816 TRUE FALSE 41582.1597 27611.22061 33870.80216 26345.93523 22605.13324 21277.0277 31763.10288 32668.2836 21666.73631 32712.58669 1.271136401 0.844054947 1.035405805 0.805376092 0.691022494 0.650423273 0.97097497 0.998645687 0.662336382 1 14.99755822 -2.205408906 1.152199637 0.833255447 199.9999996 0.434107632 0.1417112 702.4129179 2.674463002 0.043680053 367670.0546 0.006231478 2.205408906 199.1667442 PTVMGEPFTVNPALT(ph)PAK ddPTM_A459_MK2206_30min_R2 1 PTVMGEPFTVNPALTPAK 18 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 PTVMGEPFTVNPALT(1)PAK 114.56 0.002539 3503800 33359 20262 23682 20851 18150 12369 26153 20931 13785 34266 TRUE FALSE 35912.99069 19255.81854 24471.54606 19147.4066 17437.3398 12839.71096 22719.07968 23666.75357 14983.99438 33147.90323 1.083416663 0.580906081 0.738253213 0.577635529 0.52604654 0.387346098 0.685385122 0.713974377 0.452034455 1 15.01662999 -10.31080658 24.02434693 1 0.6307218 0.259850413 0.182710777 0 0 0.174933928 0.04242771 4.89E-11 10.31080658 -0.3692782 PVES(ph)PGDPNQLTR ddPTM_A459_MK2206_30min_R2 2 PVESPGDPNQLTR 13 0 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 PVES(0.999)PGDPNQLT(0.001)R;PVES(0.958)PGDPNQLT(0.042)R 86.699 0.02612 8632100 83989 56404 52163 54989 51936 42083 64175 52048 35585 75280 TRUE FALSE 90419.26242 53603.05938 53902.08839 50496.2228 49896.73168 43684.49805 55748.74541 58850.85231 38680.11898 72823.61977 1.241619995 0.736066946 0.740173155 0.693404461 0.685172364 0.599867161 0.765531095 0.808128633 0.531147986 1 16.15211883 -4.76086182 5.83834492 0.716480828 1.263074303 0.625312203 0.118832165 0.083437539 10.27102473 0.027392152 0.183178695 1.73E-05 4.76086182 0.546593475 PVPDS(ph)PVSVTR ddPTM_A459_MK2206_30min_R1 1 PVPDSPVSVTR 11 0 G3XAC1;A0A0C4DFT5;Q9BXS9-5;Q9BXS9-7;Q9BXS9-4;Q9BXS9-2;Q9BXS9-3;Q9BXS9 G3XAC1 SLC26A6 Solute carrier family 26 member 6 1 PVPDS(0.995)PVS(0.005)VTR 133.88 0.0017365 7608900 1764.2 1740.4 1696.3 1628 1999.4 1679.8 1763.5 1748.8 2660.5 2797.5 TRUE FALSE 1614.145526 1627.099644 1581.159882 1753.388842 1919.759664 1774.908824 1645.860133 1733.510426 2937.068496 3144.07542 0.51339275 0.517512918 0.502901385 0.557680274 0.610595933 0.564524888 0.523479851 0.551357774 0.934159682 1 11.61842011 -8.292404009 4.098530217 0.991950729 0.54167826 0.969058971 0.03042537 0.0363817 1.341007166 0.031217691 0.008760426 5.10E-09 8.292404009 -0.45027247 PVPDS(ph)PVSVTR ddPTM_A459_MK2206_30min_R2 1 PVPDSPVSVTR 11 0 G3XAC1;A0A0C4DFT5;Q9BXS9-5;Q9BXS9-7;Q9BXS9-4;Q9BXS9-2;Q9BXS9-3;Q9BXS9 G3XAC1 SLC26A6 Solute carrier family 26 member 6 1 PVPDS(1)PVSVTR 161.25 0.00060989 10643000 62299 38146 38560 37897 32162 39671 58144 30773 53455 54134 TRUE FALSE 67068.65934 36251.72511 39845.57115 34800.69387 30899.15828 41180.7077 50509.62296 34795.13676 58104.41928 52367.61201 1.280727854 0.692254692 0.760881958 0.664546129 0.590043294 0.786377421 0.964520264 0.664440012 1.109548766 1 15.6763872 -8.270833177 24.85931618 1.054774419 0.788999954 0.221793608 0.189565037 1007.335239 2665732.362 0.1715638 0.046714603 5.36E-09 8.270833177 -0.265774465 PVS(ph)GHGMDSR ddPTM_A459_MK2206_30min_R2 1 PVSGHGMDSR 10 0 P36507;G5E9C7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 PVS(0.991)GHGMDS(0.009)R 87.713 0.033267 3445400 17765 10776 15026 15637 10359 10085 18135 10615 8957.5 17355 TRUE FALSE 19125.10206 10240.87951 15526.95934 14359.40708 9952.25361 10468.79174 15753.85272 12002.41695 9736.607159 16788.70777 1.139164629 0.609986167 0.924845411 0.855301508 0.592794499 0.623561496 0.938360053 0.714910112 0.579949767 1 14.03520357 -4.747600646 24.99832722 0.755278136 1.139165587 0.360318657 0.151457963 792.8314706 1432091.039 0.037014068 0.741719247 1.79E-05 4.747600646 0.383887451 PVS(ph)MPVDR ddPTM_A459_MK2206_30min_R2 2 PVSMPVDR 8 0 Q4KWH8-2;A0A2U3TZV8;Q4KWH8;Q4KWH8-3;Q4KWH8-4 Q4KWH8-2 PLCH1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1" 1 PVS(1)MPVDR;PVS(1)MPVDR 94.309 0.022842 16293300 122132 85209 91238 97843 89448 73392 109481 90471 59140 125982 TRUE FALSE 131482.5198 80977.64497 94279.82938 89848.91392 85935.82208 76184.98399 95106.01319 102295.8703 64283.8903 121871.2177 1.078864414 0.66445258 0.773602096 0.737244738 0.705136321 0.625126961 0.78038125 0.839376781 0.527473931 1 16.89499792 -4.75460355 24.99711102 0.731851624 1.078865007 0.414460184 0.120834304 216.6092039 792021.4171 0.027652145 0.26559496 1.76E-05 4.75460355 0.347013383 PVS(ph)PETQADLQR ddPTM_A459_MK2206_30min_R1 1 PVSPETQADLQR 12 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 PVS(0.861)PET(0.139)QADLQR 96.707 0.016873 3556400 1815.5 1379.1 1513 1115.4 2078 2049.7 2408.6 1770.6 1296.9 1866.2 TRUE FALSE 1661.082191 1289.320339 1410.301775 1201.308301 1995.22886 2165.752243 2247.926689 1755.119831 1431.717396 2097.398945 0.791972455 0.614723461 0.672405113 0.572760992 0.951287243 1.032589555 1.071768771 0.836807816 0.682615675 1 11.03438559 -6.270500375 24.9270112 0.933318678 0.660193902 0.560643851 0.115406037 495.8616303 1364124.531 0.038100217 0.043819834 5.36E-07 6.270500375 -0.273124776 PVS(ph)PETQADLQR ddPTM_A459_MK2206_30min_R2 1 PVSPETQADLQR 12 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 PVS(0.998)PET(0.002)QADLQR 143.56 0.00081537 8158600 34782 28270 27861 34713 32844 32159 32959 23333 21242 26053 TRUE FALSE 37444.93666 26866.15291 28789.87183 31876.83686 31554.37953 33382.83328 28631.44371 26382.70321 23089.59076 25202.89274 1.485739635 1.065994812 1.142324103 1.264808654 1.252014197 1.324563558 1.136037994 1.046812502 0.916148436 1 14.62130171 -7.726273298 2.295154791 0.965478776 1.241796429 0.558193991 0.10720172 0.239179451 2.511034687 0.069519372 0.030754242 1.88E-08 7.726273298 0.276317652 PVS(ph)PSSLLDTAISEEAR ddPTM_A459_MK2206_30min_R1 3 PVSPSSLLDTAISEEAR 17 0 P57059;A0A0B4J2F2 P57059 SIK1;LOC102724428 Serine/threonine-protein kinase SIK1 1 PVS(0.984)PS(0.014)S(0.001)LLDTAISEEAR;PVS(0.967)PS(0.025)S(0.008)LLDTAISEEAR;PVS(0.949)PS(0.027)S(0.018)LLDT(0.006)AISEEAR 265.43 5.83E-41 39074200 2138.73 2633.64 2602.23 1861.94 2184.76 1908.7 2182.31 2009.86 2375.51 2618.74 TRUE FALSE 1956.819783 2462.189557 2425.597878 2005.346941 2097.736383 2016.768945 2036.732082 1992.288006 2622.452765 2943.169282 0.664868241 0.836577621 0.824144874 0.681356303 0.712747444 0.685237155 0.692020026 0.676919271 0.891030218 1 11.52315481 -8.463762107 3.74147613 0.998416297 0.725694499 0.718192482 0.057886922 0.114784316 3.286335136 0.060219378 0.015860826 3.44E-09 8.463762107 -0.272721799 PVS(ph)PSSLLDTAISEEAR ddPTM_A459_MK2206_30min_R2 3 PVSPSSLLDTAISEEAR 17 0 P57059;A0A0B4J2F2 P57059 SIK1;LOC102724428 Serine/threonine-protein kinase SIK1 1 PVS(0.988)PS(0.007)S(0.004)LLDTAISEEAR;PVS(0.999)PS(0.001)SLLDTAISEEAR;PVS(0.997)PS(0.003)SLLDTAISEEAR 322.37 9.81E-119 135114000 238063 231277 211659 208148 218743 189961 249557 191861 166335 318480 TRUE FALSE 256289.2863 219792.1205 218715.6054 191141.6426 210154.0507 197190.099 216789.8661 216937.8915 180802.5176 308088.0237 0.831870331 0.713406895 0.709912715 0.62041244 0.682123402 0.640044675 0.703662101 0.704142566 0.586853444 1 18.23298308 -10.86563673 5.461170971 1.000080634 0.686793838 0.689267627 0.062830974 6.19E-05 7.44E-06 0.06100581 0.014792289 1.36E-11 10.86563673 -0.313286796 PVS(ph)SAASVYAGAGGSGSR ddPTM_A459_MK2206_30min_R1 3 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 PVS(0.677)S(0.323)AASVYAGAGGSGSR;PVS(0.429)S(0.429)AAS(0.142)VYAGAGGSGSR;PVS(0.588)S(0.38)AAS(0.033)VYAGAGGSGSR 346.18 8.46E-164 339426000 5098.7 4921.9 5404.1 6045.2 4400.04 3228.92 5301.3 4223.85 4713.5 5119.2 TRUE FALSE 4665.028791 4601.483415 5037.284749 6510.802351 4224.77709 3411.73866 4947.65995 4186.921325 5203.485192 5753.405144 0.810829183 0.799784354 0.875531033 1.131643294 0.734308985 0.592994683 0.859953336 0.72772927 0.904418351 1 12.49020035 -5.21513126 23.73624169 0.840227425 0.805306727 0.011380977 0.141868246 2063.581943 1057719.517 0.038025854 0.100606341 6.09E-06 5.21513126 -0.034920698 PVS(ph)SAASVYAGAGGSGSR ddPTM_A459_MK2206_30min_R2 4 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 PVS(0.5)S(0.5)AASVYAGAGGSGSR;PVS(0.747)S(0.253)AASVYAGAGGSGSR;PVS(0.498)S(0.498)AAS(0.004)VYAGAGGSGSR;PVS(0.492)S(0.492)AAS(0.016)VYAGAGGSGSR 258.13 1.75E-42 240395000 120597 102210 91741 125056 89020 87889 119479 82277 58287.7 99946 TRUE FALSE 129829.999 97134.40003 94799.59915 114838.5248 85524.62751 91233.67748 103791.2638 93030.8864 63357.45879 96684.77021 1.342817475 1.004650472 0.980501882 1.187762297 0.884571865 0.943619944 1.073501686 0.96220828 0.655299264 1 16.56100103 -1.522878745 0.540230947 0.931834536 15.51728822 0.430008354 0.129717849 136.7777551 1.291768379 0.066392543 2305.832901 0.03 1.522878745 14.58545368 PVSMVPNIPGIPGPPVNSS(ph)GSISPSGHPIPSEAK ddPTM_A459_MK2206_30min_R2 1 PVSMVPNIPGIPGPPVNSSGSISPSGHPIPSEAK 34 0 K7ELQ4;P17544-2;P17544;P17544-3;P17544-1 K7ELQ4 ATF7 Cyclic AMP-dependent transcription factor ATF-7 1 PVSMVPNIPGIPGPPVNS(0.104)S(0.37)GS(0.37)IS(0.15)PS(0.005)GHPIPSEAK 82.211 1.38E-06 3072000 17200 23525 17204 26863 28203 21472 35077 21681 22318 22709 TRUE FALSE 18516.84522 22356.78271 17777.57277 24668.20697 27095.60851 22289.13201 30471.34776 24514.78114 24259.1793 21968.00719 0.842900545 1.01769735 0.809248314 1.122915099 1.23341222 1.01461784 1.387078377 1.115931041 1.104295856 1 14.42311638 -5.848099352 6.545952751 1.15571364 0.903685259 0.491096079 0.115761905 0.167286038 10.32108088 0.031303227 0.046955604 1.42E-06 5.848099352 -0.252028381 PVSMVPNIPGIPGPPVNSSGSIS(ph)PSGHPIPSEAK ddPTM_A459_MK2206_30min_R1 1 PVSMVPNIPGIPGPPVNSSGSISPSGHPIPSEAK 34 0 K7ELQ4;P17544-2;P17544;P17544-3;P17544-1 K7ELQ4 ATF7 Cyclic AMP-dependent transcription factor ATF-7 1 PVSMVPNIPGIPGPPVNS(0.006)S(0.026)GS(0.024)IS(0.464)PS(0.464)GHPIPS(0.017)EAK 78.915 3.59E-06 4399900 1220 595.94 1039.2 658.47 1033.3 1210.2 1362.8 1003.8 740.98 922.77 TRUE FALSE 1116.232594 557.1441977 968.6619994 709.1854735 992.141473 1278.720478 1271.890099 995.0238824 818.0075226 1037.089714 1.076312472 0.537218902 0.934019484 0.683822686 0.956659255 1.232989259 1.226403156 0.95943858 0.788752903 1 10.01832499 -6.514557087 23.93497596 1.055457895 0.800365021 0.272880507 0.179166128 283.081924 814212.0831 0.057916929 0.060707649 3.06E-07 6.514557087 -0.255092874 PVSSAAS(ph)VYAGAGGSGSR ddPTM_A459_MK2206_30min_R1 4 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 PVS(0.116)S(0.071)AAS(0.812)VYAGAGGSGSR;PVS(0.086)S(0.086)AAS(0.826)VY(0.001)AGAGGSGSR;PVS(0.037)S(0.026)AAS(0.782)VYAGAGGS(0.118)GS(0.037)R;PVS(0.118)S(0.07)AAS(0.812)VYAGAGGSGSR 246.42 9.62E-33 571371400 3949.18 3968.67 4659.7 5972.05 3507.51 2471.24 5032.79 4463.47 3369.42 3425.2 TRUE FALSE 3613.281503 3710.308862 4343.412547 6432.018326 3367.798449 2611.159473 4697.061762 4424.446352 3719.683267 3849.539635 0.938626913 0.963831838 1.128294019 1.670853904 0.874857455 0.678304348 1.220161943 1.149344278 0.96626704 1 11.91047021 -5.217230717 7.345166215 1.094876578 0.949764669 0.045342612 0.2448065 0.976338247 138.7348202 0.066428465 0.175990099 6.06E-06 5.217230717 -0.145111909 PVSSAAS(ph)VYAGAGGSGSR ddPTM_A459_MK2206_30min_R2 5 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 PVS(0.003)S(0.047)AAS(0.95)VYAGAGGSGSR;PVS(0.408)S(0.106)AAS(0.486)VYAGAGGSGSR;PVSSAAS(1)VYAGAGGSGSR;PVSSAAS(0.662)VY(0.338)AGAGGSGSR;PVS(0.234)S(0.234)AAS(0.533)VYAGAGGSGSR 258.17 1.21E-94 260599000 87867 98792 102244 87643 82034 83922 93944 76920 88643 96039 TRUE FALSE 94594.16508 93886.13294 105652.7639 80482.28654 78812.93297 87115.71052 81609.03995 86973.70811 96353.00791 92905.2553 1.01817884 1.010557827 1.137209769 0.866283466 0.848315122 0.937683345 0.878411449 0.93615488 1.037110415 1 16.50347259 -5.770007619 24.99993654 0.9213517 1.050839721 0.449021875 0.063585689 162.3328847 473646.8529 0.018263866 0.027576921 1.70E-06 5.770007619 0.129488021 PVSSAASVY(ph)AGAGGSGSR ddPTM_A459_MK2206_30min_R1 1 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 PVSSAASVY(1)AGAGGSGSR 185.66 1.29E-13 0 733.19 753.04 843.54 576.48 742.92 679.09 648.18 649.43 538.83 721.49 TRUE FALSE 670.8283404 704.0169591 786.282855 620.8805895 713.3279232 717.5394889 604.9410949 643.752102 594.8433067 810.8736282 0.827290859 0.868220318 0.969673729 0.765693405 0.879702951 0.884896813 0.746036218 0.793899419 0.733583244 1 9.663333283 -7.238453221 24.19918872 0.801204658 0.866805668 0.057045329 0.083696924 1102.171894 1160337.024 0.030429518 0.023552672 5.77E-08 7.238453221 0.065601011 PVSSAASVYAGAGGS(ph)GSR ddPTM_A459_MK2206_30min_R1 5 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 PVSSAASVYAGAGGS(0.896)GS(0.104)R;PVSSAASVYAGAGGS(0.975)GS(0.025)R;PVSSAASVYAGAGGS(0.983)GS(0.017)R;PVS(0.006)S(0.006)AAS(0.059)VY(0.006)AGAGGS(0.92)GS(0.004)R;PVSSAASVYAGAGGS(0.949)GS(0.051)R 229.96 8.03E-19 291294000 6622.2 7701.99 6851.19 6656.28 5725.76 5080.29 7038.74 6166.93 6306.25 6428.72 TRUE FALSE 6058.947115 7200.589051 6386.150311 7168.947839 5497.690855 5367.931629 6569.198498 6113.013181 6961.807255 7225.158368 0.838590216 0.996599477 0.883876863 0.992220167 0.760909391 0.74295003 0.909211697 0.846073244 0.963550818 1 12.81881349 -11.18156758 4.605334112 1.003205231 0.880405488 0.152954484 0.083581756 0.002919869 0.000216398 0.08590666 0.020314758 6.58E-12 11.18156758 -0.122799743 PVSSAASVYAGAGGS(ph)GSR ddPTM_A459_MK2206_30min_R2 8 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 PVSSAASVYAGAGGS(0.855)GS(0.145)R;PVSSAASVYAGAGGS(0.629)GS(0.371)R;PVSSAAS(0.289)VYAGAGGS(0.686)GS(0.025)R;PVS(0.001)S(0.003)AAS(0.341)VYAGAGGS(0.431)GS(0.224)R;PVS(0.001)S(0.001)AAS(0.191)VYAGAGGS(0.786)GS(0.021)R;PVSSAASVYAGAGGS(0.897)GS(0.103)R;PVSSAASVYAGAGGS(0.5)GS(0.5)R;PVSSAAS(0.009)VYAGAGGS(0.963)GS(0.028)R 276.05 5.24E-55 537294000 131207.4 154594.8 127405.3 145903.5 126300.5 123385.2 155126.9 124856.5 109387.5 163492.3 TRUE FALSE 141252.7394 146917.847 131652.9291 133982.7173 121341.3078 128080.7102 134758.5517 141175.6732 118901.827 158157.5596 0.893114055 0.928933447 0.832416291 0.847147096 0.767217881 0.809829834 0.852052548 0.89262678 0.751793511 1 17.27100299 -5.268017904 24.45416281 0.836718781 0.911023753 0.13363448 0.065997011 585.0403153 2174763.702 0.016203048 0.03508905 5.39E-06 5.268017904 0.074304972 PVSSAASVYAGAGGS(ph)GSRISVSR ddPTM_A459_MK2206_30min_R1 1 PVSSAASVYAGAGGSGSRISVSR 23 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 PVSSAASVYAGAGGS(0.25)GS(0.25)RIS(0.25)VS(0.25)R 45.323 0.042843 21238000 2732.8 3498.4 2907.7 2979.4 3154 2585.7 3088.8 3506.5 2793.5 2241.4 TRUE FALSE 2500.361009 3270.653524 2710.333425 3208.873904 3028.369501 2732.100099 2882.751788 3475.84304 3083.894322 2519.081554 0.992568504 1.298351583 1.07592127 1.273826923 1.202172076 1.084561989 1.144366201 1.379805682 1.224213768 1 11.29868211 PVSSAASVYAGAGGSGS(ph)R ddPTM_A459_MK2206_30min_R2 3 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 PVSSAASVYAGAGGS(0.213)GS(0.787)R;PVSSAASVYAGAGGS(0.054)GS(0.946)R;PVSSAASVYAGAGGS(0.316)GS(0.684)R 277.07 8.26E-67 537946400 108699 104818 99118 119940 108290 84865.4 122071 98811 86266 132285 TRUE FALSE 117021.079 99612.89054 102422.5446 110140.5183 104037.9905 88095.01227 106042.9311 111725.937 93769.26075 127968.5513 0.914451854 0.778416959 0.800372776 0.860684264 0.812996548 0.688411421 0.828663996 0.873073391 0.732752382 1 16.96542978 -10.60611082 4.596158512 1.000011669 0.809179121 0.450309008 0.062977444 13922536.86 32127692.87 927.9086953 0.015003435 2.48E-11 10.60611082 -0.190832547 PVSSAASVYAGAGGSGSRIS(ph)VSR ddPTM_A459_MK2206_30min_R1 1 PVSSAASVYAGAGGSGSRISVSR 23 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 PVSSAASVYAGAGGS(0.203)GS(0.203)RIS(0.427)VS(0.166)R 84.291 0.0001651 15532000 2806.2 2866.9 2822.2 3039.3 2903.5 2049.2 2330.4 3389.9 2664.3 2421.9 TRUE FALSE 2567.517954 2680.264289 2630.636927 3273.387413 2787.847447 2165.223933 2174.943268 3360.262462 2941.263519 2721.943256 0.943266524 0.98468779 0.966455462 1.202592084 1.024212184 0.795469901 0.799040635 1.234508638 1.080574884 1 11.41042128 -7.773512073 24.99985356 1.118156256 0.966176566 0.230235461 0.120877818 367.0822338 760133.6571 0.070929525 0.034484474 1.68E-08 7.773512073 -0.15197969 PVSVAGS(ph)PLSPGPVR ddPTM_A459_MK2206_30min_R2 2 PVSVAGSPLSPGPVR 15 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 PVSVAGS(0.761)PLS(0.239)PGPVR;PVS(0.004)VAGS(0.722)PLS(0.274)PGPVR 98.654 0.0087419 55756000 82221 85444 96950 99770 78589 51598 65481 58260 52753 77919 TRUE FALSE 88515.90298 81200.97521 100182.2646 91618.47185 75503.20098 53561.59805 56883.26604 65874.78204 57341.36058 75376.50941 1.174316822 1.077271631 1.329091323 1.215477774 1.001680783 0.710587403 0.754655084 0.873943123 0.760732502 1 16.20182737 -6.496847201 3.563705961 0.809012287 1.196817895 0.778312301 0.095004119 0.10587034 2.83059467 0.031691897 0.034284786 3.19E-07 6.496847201 0.387805607 PVSVAGSPLS(ph)PGPVR ddPTM_A459_MK2206_30min_R1 2 PVSVAGSPLSPGPVR 15 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 PVS(0.01)VAGS(0.033)PLS(0.957)PGPVR;PVS(0.011)VAGS(0.426)PLS(0.563)PGPVR 123.76 0.0014049 50607000 5434.1 6149.5 6091.6 4774.2 3581.8 3037.1 3844.6 2761.6 4034 4894 TRUE FALSE 4971.901259 5749.166432 5678.119164 5141.909711 3439.129321 3209.057977 3588.133749 2737.455622 4453.348736 5500.305668 0.90393181 1.045244897 1.03232793 0.93484072 0.625261491 0.583432662 0.652351699 0.497691544 0.809654773 1 12.42529608 -6.180527997 4.380759048 0.661857796 0.995769327 0.50673132 0.135661846 0.158903046 5.617058514 0.038773909 0.050480195 6.60E-07 6.180527997 0.333911531 PVSVAGSPLS(ph)PGPVR ddPTM_A459_MK2206_30min_R2 1 PVSVAGSPLSPGPVR 15 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 PVS(0.006)VAGS(0.001)PLS(0.992)PGPVR 154.47 0.0001876 39142000 78629 71386 62863 69222 40111 39169 56718 44176 34193 41298 TRUE FALSE 84648.8967 67841.07504 64958.82104 63566.34117 38536.0406 40659.60374 49270.85847 49949.95488 37167.04533 39950.44964 2.118847158 1.69813045 1.625984729 1.591129555 0.964595917 1.017750842 1.233299222 1.250297689 0.930328586 1 15.28592412 -5.600307811 0.897196734 1.071214362 2.081798922 0.837755187 0.152172583 0.353376507 0.473283504 0.06521249 0.276591268 2.51E-06 5.600307811 1.01058456 up PVT(ph)PTSMCQGSSSGATIK ddPTM_A459_MK2206_30min_R2 1 PVTPTSMCQGSSSGATIK 18 0 H7C5W6;F5H619;Q86XA9-2;Q86XA9 H7C5W6 HEATR5A HEAT repeat-containing protein 5A 1 PVT(0.98)PT(0.015)S(0.002)MCQGS(0.003)S(0.001)SGATIK 227.95 2.49E-18 6185800 27463 13570 15334 16583 12061 9737.8 20238 13126 12043 23503 TRUE FALSE 29565.5884 12896.13353 15845.22791 15228.11585 11587.42454 10108.3788 17580.72629 14841.61327 13090.47837 22736.09903 1.300380877 0.567209595 0.696919374 0.669776985 0.509648754 0.444596005 0.773251659 0.652777473 0.575757449 1 14.47269712 -4.757710469 24.9998158 0.638024418 1.300381819 0.632482695 0.147239289 65.01956278 435848.503 0.034787934 0.252464845 1.75E-05 4.757710469 0.662357401 PVTPTS(ph)MCQGSSSGATIK ddPTM_A459_MK2206_30min_R2 1 PVTPTSMCQGSSSGATIK 18 0 H7C5W6;F5H619;Q86XA9-2;Q86XA9 H7C5W6 HEATR5A HEAT repeat-containing protein 5A 1 PVT(0.31)PT(0.031)S(0.645)MCQGS(0.014)SSGATIK 166.3 1.48E-07 7977100 16802 7774.1 9182.6 7903.8 6213.4 5381.6 10250 6163.8 5295 13278 TRUE FALSE 18088.37404 7388.049499 9488.743301 7258.034257 5969.430696 5586.400559 8904.162688 6969.429823 5755.549529 12844.73995 1.408232017 0.575180932 0.738725995 0.565058871 0.464737373 0.434917373 0.693214711 0.542590185 0.448086108 1 13.64889006 -4.760881438 24.98291315 0.588336797 1.408232956 0.68493467 0.162596183 7.15046004 319892.8607 0.038285444 0.220454258 1.73E-05 4.760881438 0.819896158 PVVDGEEGEPHSIS(ph)PR ddPTM_A459_MK2206_30min_R2 2 PVVDGEEGEPHSISPR 16 0 P36507;G5E9C7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 PVVDGEEGEPHS(0.015)IS(0.985)PR;PVVDGEEGEPHS(0.021)IS(0.979)PR 121.48 0.00081837 4884200 56318 35083 39418 35389 33381 38762 34497 24860 24504 35874 TRUE FALSE 60629.74938 33340.82924 40732.17645 32497.6055 32070.29421 40237.11507 29967.50246 28109.28736 26635.31363 34703.43432 1.747082114 0.960735728 1.173721773 0.936437737 0.924124509 1.159456286 0.86353132 0.809985752 0.767512327 1 15.08279082 -2.683972875 1.302611715 0.937972177 200 0.76325841 0.130750008 180.0613872 1.627874387 0.039143425 105772.8653 0.002070271 2.683972875 199.0620278 PY(ph)KCAYCVMGFTQKSNMK ddPTM_A459_MK2206_30min_R1 1 PYKCAYCVMGFTQKSNMK 18 2 J9JID5;Q9UL36 J9JID5 ZNF236 Zinc finger protein 236 1 PY(0.983)KCAY(0.016)CVMGFTQKSNMK 52.254 0.029202 3584900 689.48 718.46 689.23 729.38 485.63 469.71 624.92 419.04 393.07 433.27 TRUE FALSE 630.8361054 671.6881234 642.4469879 785.556974 466.2863288 496.3045743 583.232727 415.3763775 433.9310331 486.9467586 1.295492976 1.379387195 1.31933723 1.613229701 0.957571481 1.019217328 1.197734078 0.853022163 0.891126238 1 8.927620231 -6.278710503 24.96794678 0.991299345 1.394361839 0.750871285 0.117172684 418.0431581 604341.3122 0.037430373 0.042543478 5.26E-07 6.278710503 0.403062494 PYGPNMANMPPQVGSGMCPPPGGMNR ddPTM_A459_MK2206_30min_R2 1 PYGPNMANMPPQVGSGMCPPPGGMNR 26 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 0 41.648 0.041992 0 3679.7 2371.8 3064.3 7194.7 3443.5 9162.8 7936.7 7083.2 6541.2 10931 FALSE TRUE 3961.420661 2254.019861 3166.462233 6606.869995 3308.290888 9511.496775 6894.601756 8008.99856 7110.141752 10574.32237 0.374626432 0.213159745 0.299448241 0.624803157 0.312860794 0.899489957 0.652013578 0.757400643 0.672396916 1 13.36827759 -6.157847289 0.280074684 0.978701694 2.29E-15 0.67206983 0.146277996 2.283422399 0.280034473 0.204101628 0.746332494 6.95E-07 6.157847289 -0.978701694 PYHPPPLFPPS(ph)PQPPDSTPR ddPTM_A459_MK2206_30min_R1 2 PYHPPPLFPPSPQPPDSTPR 20 0 P54259 P54259 ATN1 Atrophin-1 1 PYHPPPLFPPS(1)PQPPDSTPR;PY(0.014)HPPPLFPPS(0.985)PQPPDSTPR 127.35 0.00013425 9746900 7281.8 7584.8 7946.3 5701.5 5164.8 5755.7 7874.8 6408.8 7584.5 8977.5 TRUE FALSE 6662.444672 7091.028141 7406.927296 6140.630518 4959.075079 6081.58276 7349.48646 6352.768537 8372.935916 10089.70048 0.660321353 0.702798677 0.734107748 0.608603846 0.491498741 0.602751566 0.728414731 0.629629051 0.829849799 1 13.30059573 -8.505844074 2.214879721 1.000321536 0.642820027 0.737706608 0.068066254 0.168284426 1.891622557 0.07240277 0.019994697 3.12E-09 8.505844074 -0.357501509 PYHPPPLFPPS(ph)PQPPDSTPR ddPTM_A459_MK2206_30min_R2 2 PYHPPPLFPPSPQPPDSTPR 20 0 P54259 P54259 ATN1 Atrophin-1 1 PYHPPPLFPPS(0.999)PQPPDSTPR;PYHPPPLFPPS(0.997)PQPPDS(0.002)T(0.002)PR 132.24 9.69E-05 17113100 69483 56272 52712 60746 49873 41349 61885 48912 37337 77627 TRUE FALSE 74802.6719 53477.61431 54469.39177 55782.85748 47914.73543 42922.56517 53759.42516 55304.96634 40584.50477 75094.03735 0.996119992 0.712141952 0.725349092 0.742840037 0.638063116 0.571584199 0.715894724 0.736476134 0.540449098 1 16.19641074 -4.757994404 4.807030297 0.694849067 1.018575558 0.339996313 0.118656035 0.199779839 11.27266095 0.027656711 0.22192552 1.75E-05 4.757994404 0.323726491 PYQYPALT(ph)PEQK ddPTM_A459_MK2206_30min_R1 2 PYQYPALTPEQK 12 0 P04075;H3BQN4;J3KPS3;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 PYQYPALT(1)PEQK;PY(0.003)QY(0.004)PALT(0.993)PEQK 172.85 0.0004858 22268000 8340.1 10465.4 9349.1 8000 5830.5 5992.3 7434.5 6627.8 7905.7 9354.1 TRUE FALSE 7630.730699 9784.100558 8714.50914 8616.161386 5598.258839 6331.578848 6938.55807 6569.853843 8727.525806 10512.95653 0.725840602 0.930670695 0.828930389 0.819575479 0.532510415 0.602264342 0.660000643 0.624929231 0.830168543 1 13.35988083 -6.039088973 23.47035959 0.681313543 0.836291868 0.140373053 0.133005445 368.134672 221039.9686 0.037620604 0.048582013 9.14E-07 6.039088973 0.154978325 PYQYPALT(ph)PEQK ddPTM_A459_MK2206_30min_R2 4 PYQYPALTPEQK 12 0 P04075;H3BQN4;J3KPS3;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 PYQYPALT(1)PEQK;PYQYPALT(1)PEQK;PYQYPALT(1)PEQK;PYQYPALT(1)PEQK 142.1 0.00219 33892700 178734 163106 154978 164379 152142 100855 177810 149402 107734 216265 TRUE FALSE 192418.0125 155006.3932 160144.8892 150948.7099 146168.1406 104693.1077 154463.3334 168929.3544 117104.5086 209208.2908 0.919743724 0.740918979 0.765480606 0.721523556 0.698672792 0.500425233 0.738323194 0.807469693 0.559750802 1 17.6745805 -10.56246949 22.29986262 0.999999997 0.715580575 0.366424737 0.111656351 0 0 0.109247497 0.02649641 2.74E-11 10.56246949 -0.284419422 QAAS(ph)PLEPK ddPTM_A459_MK2206_30min_R1 2 QAASPLEPK 9 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;Q14980-4;Q14980-3;F5H6Y5;F5H4J1 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 QAAS(1)PLEPK;QAAS(1)PLEPK 107.34 0.012643 45187000 9164.5 10169.7 10490.2 8718.7 8061.9 7814.6 8776.4 8218.4 8298.7 7933.1 TRUE FALSE 8385.01115 9507.650682 9778.154451 9390.215785 7740.777452 8257.055899 8190.942369 8146.547395 9161.379562 8915.91232 0.940454644 1.066368796 1.096708234 1.053197412 0.868198023 0.926103309 0.91868808 0.913708783 1.027531366 1 13.12216671 -6.23948328 24.38571361 0.936059442 1.045233182 0.407840526 0.056656413 541.9735113 601946.6663 0.016770153 0.021628815 5.76E-07 6.23948328 0.10917374 QAAS(ph)PLEPK ddPTM_A459_MK2206_30min_R2 4 QAASPLEPK 9 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;Q14980-4;Q14980-3;F5H6Y5;F5H4J1 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 QAAS(1)PLEPK;QAAS(1)PLEPK;QAAS(1)PLEPK;QAAS(1)PLEPK 105.2 0.013882 71853000 484700 508662 506445 462937 471511 368952 512015 394411 400351 479538 TRUE FALSE 521809.0047 483402.5847 523329.6235 425113.5662 452997.109 382992.7269 444786.8155 445961.8719 435172.8063 463890.7143 1.124853308 1.042061352 1.128131276 0.916408872 0.976516871 0.825609815 0.958818105 0.96135115 0.938093376 1 18.82342544 -5.76505322 24.99999012 0.935528758 1.09271993 0.684162155 0.049348662 50.23534436 347524.0989 0.013442539 0.020858444 1.72E-06 5.76505322 0.157191172 QACTAQT(ph)PEPLR ddPTM_A459_MK2206_30min_R1 4 QACTAQTPEPLR 12 0 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 QACT(0.084)AQT(0.916)PEPLR;QACT(0.002)AQT(0.998)PEPLR;QACTAQT(1)PEPLR;QACTAQT(1)PEPLR 147.56 0.0014648 22802000 4721.88 5439.1 5154.56 3861.36 4957.17 5310.5 6097.8 4599.48 5306.8 6149.4 TRUE FALSE 4320.25931 5085.013601 4804.682829 4158.762616 4759.715422 5611.175921 5691.026888 4559.267231 5858.460851 6911.234098 0.625106783 0.735760579 0.69519897 0.60173951 0.688692548 0.811892036 0.823445829 0.659689307 0.847672177 1 12.75472763 -12.82062072 0.137185815 1.614336939 0.591316696 0.684777681 0.064980778 49.77181955 0.660568703 9.203232912 0.49109703 1.51E-13 12.82062072 -1.023020243 QACTAQT(ph)PEPLR ddPTM_A459_MK2206_30min_R2 3 QACTAQTPEPLR 12 0 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 QACT(0.019)AQT(0.981)PEPLR;QACT(0.002)AQT(0.998)PEPLR;QACT(0.06)AQT(0.94)PEPLR 132.51 0.0043815 28234000 44995 50754 44560 49584 53556 59759 71789 46824 48884 62878 TRUE FALSE 48439.8518 48233.63016 46045.60816 45532.82859 51453.12234 62033.17062 62363.01807 52944.05757 53135.84196 60826.29601 0.796363661 0.792973324 0.757001678 0.74857145 0.845902607 1.01984133 1.025264107 0.870413966 0.873566951 1 15.89240753 -6.5562563 5.029741082 0.953365784 0.775884496 0.737596315 0.051945763 0.109808759 6.956114065 0.019016818 0.019421191 2.78E-07 6.5562563 -0.177481288 QACTAQT(ph)PEPLRR ddPTM_A459_MK2206_30min_R2 1 QACTAQTPEPLRR 13 1 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 QACTAQT(1)PEPLRR 103.04 0.013008 0 14895 30622 22137 27751 27576 31728 25640 24178 29525 29525 TRUE FALSE 16035.37265 29101.35601 22875.03653 25483.65453 26493.22768 32935.43127 22273.4372 27338.14762 32093.03113 28561.60167 0.561431142 1.018897902 0.800901742 0.892234785 0.927582003 1.153136706 0.779838521 0.957164375 1.123642557 1 14.80178926 -4.755434201 24.92297626 0.952220443 0.561430478 0.517975833 0.115466163 159.5212932 661985.1514 0.028521104 0.252602183 1.76E-05 4.755434201 -0.390789964 QADLYISEGLHPR ddPTM_A459_MK2206_30min_R1 1 QADLYISEGLHPR 13 0 P40227;Q92526-3;Q92526 P40227 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 0 165.51 0.00050073 3741600 3042.9 2425.3 2368.9 1801.9 3165.6 3292.8 3297 2812 2222.2 2403.8 FALSE TRUE 2784.085376 2267.412529 2208.105668 1940.68265 3039.507449 3479.23549 3077.063146 2787.41498 2453.205642 2701.600892 1.030531706 0.839284787 0.817332299 0.718345428 1.125076416 1.287842146 1.138977691 1.031764162 0.908056275 1 11.39959885 -6.276521208 24.9245658 1.096686717 0.848078552 0.475218295 0.118077144 684.9308581 1131929.487 0.039349619 0.044791136 5.29E-07 6.276521208 -0.248608165 QADPQPQAWPPPDS(ph)PVR ddPTM_A459_MK2206_30min_R1 2 QADPQPQAWPPPDSPVR 17 0 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ERU2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 QADPQPQAWPPPDS(1)PVR;QADPQPQAWPPPDS(1)PVR 114.9 0.0020932 0 1934.48 1760.05 2260.56 1131.56 2096.04 1781.99 2176.9 1831.25 1998.58 1990.75 TRUE FALSE 1769.942318 1645.470425 2107.119485 1218.712947 2012.550288 1882.884734 2031.682973 1815.239574 2206.339543 2237.379139 0.791078404 0.735445502 0.94178025 0.5447056 0.899512404 0.841558188 0.908063786 0.811324081 0.986126805 1 11.12759404 -7.819870854 0.547644914 1.002741576 0.767211407 0.3450371 0.104421368 0.956606018 0.642440529 0.100934723 0.060928069 1.51E-08 7.819870854 -0.235530169 QADPQPQAWPPPDS(ph)PVR ddPTM_A459_MK2206_30min_R2 2 QADPQPQAWPPPDSPVR 17 0 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ERU2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 QADPQPQAWPPPDS(1)PVR;QADPQPQAWPPPDS(1)PVR 170.98 7.78E-07 14026700 43966 40460.1 43336 41106 39778 38919 44872 36736 32545.4 44212 TRUE FALSE 47332.07076 38450.91027 44780.80061 37747.50831 38216.11585 40400.08982 38980.2525 41537.52133 35376.14006 42769.36606 1.106681607 0.899029231 1.047029796 0.882582834 0.893539451 0.944603429 0.911405898 0.971197966 0.827137349 1 15.3842902 -2.684989521 1.66196157 0.928255418 199.9999996 0.410148431 0.061359688 1386.107656 4.319585433 0.016135715 1051544.501 0.00206543 2.684989521 199.0717442 QADPQPQAWPPPDS(ph)PVRVDTVR ddPTM_A459_MK2206_30min_R1 2 QADPQPQAWPPPDSPVRVDTVR 22 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ERU2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 QADPQPQAWPPPDS(1)PVRVDTVR;QADPQPQAWPPPDS(0.999)PVRVDT(0.001)VR 201.31 9.65E-23 61569000 5739.6 5874.3 6103.1 4997.4 6377.2 5908.2 6186.5 5604.9 4398.5 4150.4 TRUE FALSE 5251.41688 5491.882002 5688.838576 5382.300614 6123.18262 6242.717178 5773.809873 5555.89695 4855.739815 4664.582886 1.125806317 1.177357577 1.219581411 1.153865361 1.312696713 1.338322703 1.23779768 1.191081193 1.040980498 1 12.18753236 -8.269386549 2.796471333 1.001566957 1.226595286 0.631129044 0.061656179 0.187123289 2.718044639 0.062966444 0.018011209 5.38E-09 8.269386549 0.225028329 QADPQPQAWPPPDS(ph)PVRVDTVR ddPTM_A459_MK2206_30min_R2 4 QADPQPQAWPPPDSPVRVDTVR 22 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ERU2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 QADPQPQAWPPPDS(1)PVRVDTVR;QADPQPQAWPPPDS(0.985)PVRVDT(0.015)VR;QADPQPQAWPPPDS(0.999)PVRVDT(0.001)VR;QADPQPQAWPPPDS(0.996)PVRVDT(0.004)VR 139.02 6.05E-06 88586500 390210 540136 471545 541539 555463 580699 474094 381401 504843 513239 TRUE FALSE 420084.7776 513313.6317 487266.0749 497293.5314 533652.7316 602797.9074 411844.8883 431251.4202 548753.3316 496492.0535 0.846105743 1.033880861 0.981417671 1.001614282 1.074846471 1.214113908 0.829509527 0.868596823 1.105261057 1 18.9214111 -4.756099357 24.67957228 1.009306894 0.846105438 0.18483113 0.104452122 274.5169728 1268551.277 0.027156382 0.225436266 1.75E-05 4.756099357 -0.163201456 QADSEMTGY(ph)VVTR ddPTM_A459_MK2206_30min_R1 1 QADSEMTGYVVTR 13 0 B5MDL5;P53778-2;P53778 B5MDL5 MAPK12 Mitogen-activated protein kinase 12 1 QADSEMT(0.004)GY(0.968)VVT(0.028)R 138.42 0.013824 1894900 915.68 870.95 891.76 653.46 1036.9 926.22 984.94 887.47 791.73 781.14 TRUE FALSE 837.7966076 814.2509967 831.2298158 703.7896024 995.5980773 978.661776 919.2364497 879.7109434 874.0331667 877.9135205 0.954304254 0.927484288 0.946824256 0.801661651 1.134050284 1.114758747 1.047069476 1.00204738 0.995580027 1 9.777935023 -6.268540469 24.99546718 1.052219665 0.911795134 0.580903571 0.058733062 427.6044661 1505143.493 0.019175362 0.022187308 5.39E-07 6.268540469 -0.140424531 QAEEENELR ddPTM_A459_MK2206_30min_R1 1 QAEEENELR 9 0 Q96PY5-3;Q96PY5;C9IZY8 Q96PY5-3 FMNL2 Formin-like protein 2 0 96.034 0.037924 0 2421.8 2479.1 2040.2 2611.9 3265.7 2444.6 2364.8 2771.2 1423.7 946.18 FALSE TRUE 2215.813193 2317.710139 1901.716908 2813.068991 3135.620254 2583.011139 2207.048507 2746.971691 1571.69871 1063.399922 2.083706372 2.179528221 1.788336513 2.645353769 2.94867452 2.429011971 2.075464237 2.583197191 1.477994006 1 10.05446855 -8.442499662 3.731969036 1.008719788 2.340318968 0.668887932 0.318107765 0.132309554 3.42666689 0.331661928 0.087454011 3.61E-09 8.442499662 1.331599179 QAEQLS(ph)AAGEGGDAGR ddPTM_A459_MK2206_30min_R2 1 QAEQLSAAGEGGDAGR 16 0 F8WBJ6;Q9NRX1 F8WBJ6 PNO1 RNA-binding protein PNO1 1 QAEQLS(1)AAGEGGDAGR 144.17 0.00038989 9217900 24763 25164 22822 28747 23212 28077 27123 21546 22128 24706 TRUE FALSE 26658.87432 23914.39235 23582.87409 26398.27814 22300.58025 29145.48991 23561.71752 24362.13618 24052.65344 23899.84524 1.115441295 1.00060867 0.986737523 1.104537618 0.933084713 1.219484462 0.985852305 1.019342842 1.00639369 1 14.54471366 QAFQIGS(ph)PWR ddPTM_A459_MK2206_30min_R1 2 QAFQIGSPWR 10 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 1 QAFQIGS(1)PWR;QAFQIGS(1)PWR 126.66 0.0034191 23700000 3038.7 3348.4 3609.6 2498.2 3698.9 3134 4322.4 3377.4 2789.2 3116.5 TRUE FALSE 2780.242608 3130.418551 3364.590409 2690.611797 3551.56498 3311.444372 4034.060583 3347.871748 3079.147321 3502.595548 0.793766385 0.893742514 0.960599179 0.768176559 1.013980898 0.945425849 1.151734628 0.955825959 0.879104447 1 11.77420869 -6.285134422 24.92299686 0.994560099 0.864513964 0.400052093 0.081687152 833.8308181 877040.1329 0.025764631 0.029229935 5.19E-07 6.285134422 -0.130046135 QAFQIGSPWR ddPTM_A459_MK2206_30min_R2 2 QAFQIGSPWR 10 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 157.99 0.0066875 128910000 162248 171990 148563 179214 166043 179171 176263 123115 160911 171662 FALSE TRUE 174669.8316 163449.2267 153516.0163 164571.6429 159523.3175 185989.478 153119.4564 139206.5532 174906.7479 166060.683 1.051843389 0.984274084 0.924457334 0.991033157 0.960632671 1.120009111 0.922069292 0.83828725 1.053270074 1 17.34135101 QAGAPGGSSGSGGS(ph)PELSALR ddPTM_A459_MK2206_30min_R1 1 QAGAPGGSSGSGGSPELSALR 21 0 Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4 Q9Y2J4 AMOTL2 Angiomotin-like protein 2 1 QAGAPGGS(0.009)S(0.001)GS(0.026)GGS(0.951)PELS(0.013)ALR 208.69 1.05E-17 5379200 1058.7 1200.3 976.92 825.23 1151.5 1204.9 1385.6 895.94 745.84 882.55 TRUE FALSE 968.6520055 1122.160252 910.6093923 888.7893576 1105.633317 1273.120397 1293.169152 888.106891 823.372737 991.8869569 0.976575001 1.131338853 0.918057633 0.896059124 1.114676737 1.283533761 1.303746504 0.895371075 0.830107434 1 9.954031899 -7.897277737 23.35122857 0.896870722 1.086248759 0.273659641 0.134407832 9.5383856 2140.561263 0.081828843 0.03930932 1.27E-08 7.897277737 0.189378036 QAGAPGGSSGSGGS(ph)PELSALR ddPTM_A459_MK2206_30min_R2 4 QAGAPGGSSGSGGSPELSALR 21 0 Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4 Q9Y2J4 AMOTL2 Angiomotin-like protein 2 1 QAGAPGGSSGS(0.004)GGS(0.988)PELS(0.008)ALR;QAGAPGGS(0.001)SGSGGS(0.964)PELS(0.034)ALR;QAGAPGGSSGS(0.003)GGS(0.821)PELS(0.175)ALR;QAGAPGGSSGS(0.002)GGS(0.967)PELS(0.031)ALR 239.87 4.73E-31 42633900 111215 135234 126108 140040 121106 132637 141306 106545 128583 126899 TRUE FALSE 119729.7059 128518.4762 130312.3778 128598.284 116350.7699 137684.594 122752.3525 120470.7973 139766.9169 122758.296 0.975328836 1.04692294 1.061536222 1.047573062 0.947803722 1.121590951 0.999951583 0.981365832 1.138553739 1 16.905461 -4.755927931 24.46767811 1.037366112 0.975328706 0.100112924 0.056626845 326.0311114 1447190.92 0.013357202 0.110718949 1.75E-05 4.755927931 -0.062037406 QAGAPGGSSGSGGSPELS(ph)ALR ddPTM_A459_MK2206_30min_R1 2 QAGAPGGSSGSGGSPELSALR 21 0 Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4 Q9Y2J4 AMOTL2 Angiomotin-like protein 2 1 QAGAPGGSS(0.001)GS(0.007)GGS(0.141)PELS(0.852)ALR;QAGAPGGSSGS(0.001)GGS(0.185)PELS(0.814)ALR 176.44 4.75E-14 17061100 3725.2 3911.1 3458.3 3033.6 4097.4 3386.6 4344 4123.1 3626.8 3131.8 TRUE FALSE 3408.352178 3656.486679 3223.560231 3267.248398 3934.191882 3578.346365 4054.219686 4087.052171 4003.818839 3519.791028 0.968339356 1.038836297 0.915838527 0.928250675 1.117734505 1.016636027 1.151835337 1.161163302 1.137516065 1 11.78127406 -6.267278221 24.91614979 1.104214524 0.964890669 0.555735202 0.058789287 345.7544811 1475438.45 0.018623918 0.021681569 5.40E-07 6.267278221 -0.139323854 QAGEVTYADAHK ddPTM_A459_MK2206_30min_R1 2 QAGEVTYADAHK 12 0 Q13247-3;Q13247;A0A590UJK4;A0A590UK01;A0A590UJP7;A0A590UK80;A0A0D9SEM4;Q08170 Q13247-3;Q08170 SRSF6;SRSF4 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 4 0 ; 173.59 0.0002493 11846100 10932.9 10500.9 11564.7 9278.5 10488.4 10117.9 11833.8 9770.7 9988.2 9174.4 FALSE TRUE 10002.99944 9817.289501 10779.72039 9993.131678 10070.62482 10690.76675 11044.38879 9685.2758 11026.50913 10310.99394 0.970129505 0.952118638 1.045458901 0.969172491 0.976688075 1.036831834 1.071127465 0.93931544 1.069393426 1 13.33189579 -6.754816421 24.79026517 1.022527963 0.983747377 0.190860803 0.041774533 260.9156275 976626.51 0.013691145 0.013390197 1.76E-07 6.754816421 -0.038780587 QAGEVTYADAHK ddPTM_A459_MK2206_30min_R2 1 QAGEVTYADAHK 12 0 Q13247-3;Q13247;A0A590UJK4;A0A590UK01;A0A590UJP7;A0A590UK80;A0A0D9SEM4;Q08170 Q13247-3;Q08170 SRSF6;SRSF4 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 4 0 115.12 0.0074963 2517500 40433 54232 48800 54541 48535 41663 47929 42583 44061 51238 FALSE TRUE 43528.58157 51538.91774 50426.96764 50084.82583 46629.27203 43248.51466 41635.86473 48148.74431 47893.34614 49566.10826 0.87819244 1.039801581 1.017367904 1.010465167 0.940749106 0.872542069 0.840006734 0.971404575 0.966251897 1 15.59706637 -6.406699475 5.037967303 0.921119504 0.992008674 0.156523089 0.060003838 0.356454237 13.33226575 0.019455397 0.022026675 3.92E-07 6.406699475 0.07088917 QAGIGGEPAAAGAGCS(ph)PRPK ddPTM_A459_MK2206_30min_R1 2 QAGIGGEPAAAGAGCSPRPK 20 1 J3QQY0;J3KSZ8;Q68DK7 J3QQY0 MSL1 Male-specific lethal 1 homolog 1 QAGIGGEPAAAGAGCS(1)PRPK;QAGIGGEPAAAGAGCS(1)PRPK 89.08 0.0010378 26082000 6608 7769.5 7616.8 6346.4 6412.6 5821.8 6776.7 6705.6 5718.8 6123.8 TRUE FALSE 6045.9549 7263.704138 7099.792838 6835.200828 6157.172563 6151.425285 6324.638708 6646.973646 6313.289725 6882.462576 0.878458086 1.055393191 1.031577398 0.993133018 0.89461766 0.893782598 0.91894996 0.965784205 0.917300989 1 12.74870914 -6.2000525 8.744451761 0.927525922 0.997528439 0.216636769 0.052743005 0.534550273 72.28956675 0.015395065 0.019882255 6.31E-07 6.2000525 0.070002517 QAGIGGEPAAAGAGCS(ph)PRPK ddPTM_A459_MK2206_30min_R2 2 QAGIGGEPAAAGAGCSPRPK 20 1 J3QQY0;J3KSZ8;Q68DK7 J3QQY0 MSL1 Male-specific lethal 1 homolog 1 QAGIGGEPAAAGAGCS(1)PRPK;QAGIGGEPAAAGAGCS(1)PRPK 105.17 0.0002764 42616000 80176 78351 77882 82721 85756 74802 86312 70333 73235 99857 TRUE FALSE 86314.3362 74460.20327 80478.54701 75962.42969 82388.78855 77648.64253 74979.13072 79525.76459 79604.84792 96598.67427 0.893535412 0.770820136 0.833122686 0.786371348 0.852897715 0.803827207 0.77619213 0.823259379 0.824078058 1 16.55971577 -9.108172711 2.076029808 0.999998583 0.814955833 0.705645365 0.035213775 4.600900892 15.68901581 0.03161212 0.008678672 7.80E-10 9.108172711 -0.18504275 QAHDLS(ph)PAAESSSTFSFSGR ddPTM_A459_MK2206_30min_R1 4 QAHDLSPAAESSSTFSFSGR 20 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 QAHDLS(1)PAAESSSTFSFSGR;QAHDLS(1)PAAESSSTFSFSGR;QAHDLS(1)PAAESSSTFSFSGR;QAHDLS(1)PAAESSSTFSFSGR 222.13 1.04E-19 101579800 10080.7 9054.1 10025.6 8350.4 10763 10058.6 10389.2 9287.2 7799.9 7889.8 TRUE FALSE 9223.283529 8464.676444 9345.090205 8993.549255 10334.28692 10628.10924 9696.155424 9206.00299 8610.727517 8867.247989 1.040151752 0.954600171 1.053888446 1.01424357 1.165444671 1.198580355 1.093479672 1.038202947 0.971071016 1 13.11427071 -2.056437079 20.88721113 1.058539656 0.197703167 0 0.075417126 0 0 0.019003369 0 0.008781383 2.056437079 -0.860836489 QAHDLS(ph)PAAESSSTFSFSGR ddPTM_A459_MK2206_30min_R2 5 QAHDLSPAAESSSTFSFSGR 20 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 QAHDLS(1)PAAESSSTFSFSGR;QAHDLS(0.696)PAAES(0.093)S(0.093)S(0.093)T(0.023)FS(0.001)FSGR;QAHDLS(1)PAAESSSTFSFSGR;QAHDLS(1)PAAESSSTFSFSGR;QAHDLS(0.994)PAAES(0.002)S(0.001)S(0.002)T(0.001)FSFSGR 148.64 1.85E-05 145500000 110257 145367 138234 159543 146010 147568 150786 123430.4 140263 119869 TRUE FALSE 118698.3607 138148.2862 142842.6526 146507.8265 140276.9138 153183.8036 130987.6171 139563.1771 152462.8222 115957.6843 1.023635142 1.191368101 1.231851545 1.263459402 1.209725035 1.321031931 1.129615668 1.203569887 1.314814305 1 16.8232389 -4.761784064 3.537867341 1.219389027 0.995717331 0.276235344 0.088363757 0.36539535 7.413837235 0.020680063 0.226091973 1.73E-05 4.761784064 -0.223671696 QAIEEEGGDPDNIELTVSTDT(ph)PNKKPTK ddPTM_A459_MK2206_30min_R2 1 QAIEEEGGDPDNIELTVSTDTPNKKPTK 28 2 Q9NWH9;H7BXE3;H0YL55;H0YMW8;H0YNF3;H0YMR6;H0YLE6;H0YKU6 Q9NWH9 SLTM SAFB-like transcription modulator 1 QAIEEEGGDPDNIELT(0.011)VS(0.194)T(0.194)DT(0.594)PNKKPT(0.005)K 85.798 4.05E-05 10560000 27298 20983 21802 22443 26941 13820 21627 17677 14630 27154 TRUE FALSE 29387.95587 19941.01473 22528.8678 20609.33511 25883.16097 14345.92978 18787.34892 19987.44459 15902.49096 26267.9672 1.118775413 0.759138101 0.857655548 0.78458051 0.985350742 0.546137799 0.715218988 0.760905648 0.605394808 1 14.68101694 -2.616381929 1.444392603 0.765038368 199.8026559 0.338226159 0.138644097 920.1652456 4.487981211 0.038402919 604288.4102 0.002418901 2.616381929 199.0376176 QAISGT(ph)SPVASSFQGIK ddPTM_A459_MK2206_30min_R2 1 QAISGTSPVASSFQGIK 17 0 P51587;A0A590UJI7 P51587 BRCA2 Breast cancer type 2 susceptibility protein 1 QAIS(0.026)GT(0.863)S(0.096)PVAS(0.014)S(0.002)FQGIK 206.63 1.36E-08 4298100 51099 48604 50136 53971 53173 46763 62098 42858 43853 65263 TRUE FALSE 55011.17873 46190.39604 51807.50922 49561.39666 51085.16085 48542.59873 53944.45801 48459.68775 47667.25467 63133.47365 0.871347251 0.731630835 0.820602863 0.785025657 0.809161256 0.768888451 0.854450973 0.767575186 0.755023475 1 15.94611751 -10.70955712 4.34343157 1.000059734 0.794954502 0.683218971 0.041674182 55348264.32 3.821817968 33296.29375 0.009338952 1.95E-11 10.70955712 -0.205105232 QALAPGLS(ph)PSQRPGGSSSACSR ddPTM_A459_MK2206_30min_R2 1 QALAPGLSPSQRPGGSSSACSR 22 1 Q9BWK5-3;Q9BWK5-2;Q9BWK5 Q9BWK5-3 MRI Modulator of retrovirus infection homolog 1 QALAPGLS(0.915)PS(0.074)QRPGGS(0.004)S(0.004)S(0.004)ACSR 67.532 0.0031553 7014800 12319 13478 10932 13217 14989 11827 11071 9826.9 13466 13910 TRUE FALSE 13262.15211 12808.70212 11296.46742 12137.12882 14400.45655 12277.08477 9617.364401 11111.30957 14637.24834 13456.11784 0.985585313 0.951886887 0.839504199 0.901978488 1.070179135 0.912379404 0.714720584 0.825744074 1.087776468 1 13.71597462 -6.998574188 24.99846822 0.881254815 0.946166502 0.01372153 0.108564189 145.4822513 2550647.055 0.039673037 0.034733274 1.00E-07 6.998574188 0.064911687 QALDS(ph)EEEEEDVAAK ddPTM_A459_MK2206_30min_R1 1 QALDSEEEEEDVAAK 15 0 H7C3D5;Q8NC44 H7C3D5 FAM134A Protein FAM134A 1 QALDS(1)EEEEEDVAAK 180.78 2.03E-05 7485900 3706.2 3524.4 3380.5 2760.4 3425 2869.1 3595.9 3360.9 3537.8 3481 TRUE FALSE 3390.968228 3294.960919 3151.041079 2973.006486 3288.574997 3031.545963 3356.024072 3331.516006 3905.56697 3912.25256 0.866755961 0.8422158 0.80542885 0.759921922 0.840583512 0.774885035 0.857823983 0.851559544 0.998291115 1 11.93378379 -8.194183547 2.340319689 1.009338108 0.817828066 0.820433417 0.032762676 0.121423388 1.190141929 0.030331849 0.009052691 6.39E-09 8.194183547 -0.191510042 QALDS(ph)EEEEEDVAAK ddPTM_A459_MK2206_30min_R2 2 QALDSEEEEEDVAAK 15 0 H7C3D5;Q8NC44 H7C3D5 FAM134A Protein FAM134A 1 QALDS(1)EEEEEDVAAK;QALDS(1)EEEEEDVAAK 137.27 0.00040232 14582100 122132 85142 88495 76691 78228 76160 118317 59892 87728 92490 TRUE FALSE 131482.5198 80913.97209 91445.37913 70425.09998 75156.37566 79058.32217 102781.8358 67720.09004 95358.42286 89472.05887 1.469537211 0.904349057 1.022055156 0.787118357 0.839998281 0.883609064 1.148759032 0.756885344 1.065789969 1 16.44914959 -4.759987662 24.99954393 0.927003659 1.469537873 0.645610924 0.118859059 22.12419443 380860.9029 0.028374507 0.173357137 1.74E-05 4.759987662 0.542534214 QALDYVELSPLTQAS(ph)PQR ddPTM_A459_MK2206_30min_R1 2 QALDYVELSPLTQASPQR 18 0 F6TR96;Q9H2D6-6;Q9H2D6-5;Q9H2D6-7;Q9H2D6-3;Q9H2D6;F6WYE2;H0Y5J9;Q9H2D6-2 F6TR96 TRIOBP TRIO and F-actin-binding protein 1 QALDYVELSPLT(0.104)QAS(0.896)PQR;QALDYVELSPLT(0.319)QAS(0.681)PQR 132.24 0.00042232 2613100 2653.1 2520.9 2573 2113.7 2709.2 2327.42 2892.5 2229.99 2545.1 2461.8 TRUE FALSE 2427.439913 2356.788952 2398.351929 2276.49754 2601.286827 2459.196509 2699.546603 2210.493433 2809.672253 2766.78637 0.877349961 0.851814574 0.866836686 0.822794837 0.940183476 0.888827752 0.975697521 0.798938963 1.015500251 1 11.43399554 -8.322608001 0.267391237 1.023735462 0.840101408 0.367456221 0.056672009 2.352366277 0.612620354 0.163550455 0.115974724 4.76E-09 8.322608001 -0.183634054 QALYLMFDTSQESPVKS(ph)SPVR ddPTM_A459_MK2206_30min_R1 1 QALYLMFDTSQESPVKSSPVR 21 1 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 QALYLMFDTSQESPVKS(0.5)S(0.5)PVR 73.839 0.0019357 9177800 1965.2 2075 1890.1 1808.7 2281.3 1875.4 2016.9 1909.4 1660.3 1585.8 TRUE FALSE 1798.04942 1939.917123 1761.805278 1948.006387 2190.43099 1981.583527 1882.356281 1892.706317 1832.894126 1782.260876 1.008858717 1.088458569 0.988522669 1.092997335 1.229018164 1.111836967 1.056162039 1.06196929 1.028409562 1 10.79949281 -8.217516495 1.476907468 1.002772397 1.086616534 0.171326358 0.061103267 0.764674939 3.129013779 0.062409965 0.019362866 6.06E-09 8.217516495 0.083844137 QALYLMFDTSQESPVKSS(ph)PVR ddPTM_A459_MK2206_30min_R1 1 QALYLMFDTSQESPVKSSPVR 21 1 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 QALYLMFDT(0.001)S(0.001)QES(0.015)PVKS(0.293)S(0.69)PVR 55.871 0.017277 11346000 1812 1720.4 2099.3 1481.6 1671 1440.9 1793.5 1773.7 1327.6 1661.9 TRUE FALSE 1657.879885 1608.401647 1956.805365 1595.713089 1604.440532 1522.482513 1673.858887 1758.192728 1465.608771 1867.788719 0.887616393 0.861126117 1.047658841 0.854332759 0.859005366 0.81512566 0.89617143 0.941323133 0.784675888 1 10.86711555 QAPFRS(ph)PTAPSVFSPTGNR ddPTM_A459_MK2206_30min_R2 2 QAPFRSPTAPSVFSPTGNR 19 1 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4 H0Y3X6 NELFA Negative elongation factor A 1 QAPFRS(0.981)PT(0.019)APSVFSPTGNR;QAPFRS(0.985)PT(0.011)APS(0.004)VFSPTGNR 93.196 0.0011459 33509000 42177 44230 37448 35029 44231 41723 48948 34559 41496 55920 TRUE FALSE 45406.10355 42033.60252 38696.49763 32167.01865 42494.2687 43310.798 42521.0688 39075.97996 45105.24707 54095.33498 0.83937189 0.777028232 0.715338904 0.594635723 0.785544053 0.800638318 0.786039477 0.72235397 0.833810292 1 15.72321657 -8.615209692 3.165741087 0.999893681 0.751062373 0.586370763 0.063304958 0.290223864 6.821890298 0.065443619 0.017358196 2.43E-09 8.615209692 -0.248831309 QAPGVGAVGGGS(ph)PER ddPTM_A459_MK2206_30min_R1 2 QAPGVGAVGGGSPER 15 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 QAPGVGAVGGGS(1)PER;QAPGVGAVGGGS(1)PER 134.93 0.00041179 7162900 2421 2416.4 2691 1911.67 2247.71 2076.4 3433.3 2593.4 3073.3 3545.5 TRUE FALSE 2215.081237 2259.091921 2508.342418 2058.907155 2158.178951 2193.963974 3204.270821 2570.726177 3392.780533 3984.743307 0.555890572 0.56693537 0.629486575 0.516697563 0.541610534 0.550591043 0.804134815 0.645142229 0.851442683 1 11.96027108 -8.245389337 0.680377988 1.000098178 0.555195169 0.8279624 0.064231791 0.269710934 0.282851917 0.062669907 0.027038377 5.68E-09 8.245389337 -0.444903008 QAPGVGAVGGGS(ph)PER ddPTM_A459_MK2206_30min_R2 1 QAPGVGAVGGGSPER 15 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 QAPGVGAVGGGS(1)PER 112.82 0.0029147 11284000 33713 24615 23556 19467 23390 23411 31043 22463 21395 35226 TRUE FALSE 36294.0932 23392.65489 24341.34528 17876.48383 22471.59107 24301.92201 26967.01681 25398.99123 23255.89843 34076.5785 1.065074453 0.686473112 0.714313066 0.524597381 0.659443878 0.713156164 0.791365154 0.745350394 0.682459902 1 15.05649287 -9.729005449 16.20776101 1.000003715 0.722982343 0.275974154 0.129901494 0 0 0.126720292 0.030734185 1.87E-10 9.729005449 -0.277021372 QAPGVGAVGGGS(ph)PEREEVGAGYNS(ph)EDEYEAAAAR ddPTM_A459_MK2206_30min_R1 2 QAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 34 1 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3 A0A087WXV6 OTUD5 OTU domain-containing protein 5 2 QAPGVGAVGGGS(1)PEREEVGAGY(0.002)NS(0.997)EDEYEAAAAR;QAPGVGAVGGGS(0.999)PEREEVGAGY(0.263)NS(0.73)EDEY(0.008)EAAAAR 95.601 1.16E-10 17053700 1310.56 1449.77 1634.28 1335.23 1448.64 1348.17 1445.43 1434.18 1316.01 1211.99 TRUE FALSE 1199.08999 1355.389709 1523.349627 1438.069646 1390.937601 1424.50222 1349.008002 1421.641115 1452.813949 1362.140471 0.880298336 0.995044005 1.118349876 1.055742544 1.021141087 1.045782172 0.990358946 1.043681724 1.066566907 1 10.41165977 -4.836240995 3.621330869 1.042929971 0.871172431 0.670888041 0.03429391 0.145053518 3.196515281 0.00884763 0.061122418 1.46E-05 4.836240995 -0.17175754 QAPGVGAVGGGS(ph)PEREEVGAGYNS(ph)EDEYEAAAAR ddPTM_A459_MK2206_30min_R2 2 QAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 34 1 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3 A0A087WXV6 OTUD5 OTU domain-containing protein 5 2 QAPGVGAVGGGS(0.997)PEREEVGAGY(0.459)NS(0.537)EDEY(0.007)EAAAAR;QAPGVGAVGGGS(0.998)PEREEVGAGY(0.392)NS(0.524)EDEY(0.086)EAAAAR 71.024 0.00011291 31958000 67865 71303 71393 87092 87146 94103 83147 66498 70856 79715 TRUE FALSE 73060.79658 67762.1967 73773.20699 79976.30501 83724.21017 97684.15561 72229.69902 75189.51692 77018.9268 77113.90608 0.947439966 0.878728626 0.956678383 1.037119102 1.085721298 1.266751492 0.936662435 0.975044849 0.998768325 1 16.23470343 -5.66966909 3.21010107 1.049355552 0.913578725 0.279609364 0.086213471 0.327111587 6.673165383 0.026422351 0.048960543 2.14E-06 5.66966909 -0.135776827 QAPLPS(ph)PESLDLGR ddPTM_A459_MK2206_30min_R2 1 QAPLPSPESLDLGR 14 0 H3BRS1;Q12968 H3BRS1 NFATC3 "Nuclear factor of activated T-cells, cytoplasmic 3" 1 QAPLPS(0.999)PES(0.001)LDLGR 117.07 0.0025586 3434500 15804 26273 18321 18873 18448 21611 17124 16779 20428 20641 TRUE FALSE 17013.96639 24968.32102 18931.813 17331.01553 17723.63883 22433.42175 14875.59823 18972.07291 22204.79051 19967.48586 0.852083558 1.250448915 0.948132035 0.867961828 0.887624959 1.123497565 0.744991049 0.950148308 1.112047389 1 14.28536507 -5.457834754 24.99798667 0.945428116 1.06327243 0.068688126 0.138428359 430.7856591 165559.6307 0.034743508 0.072324316 3.48E-06 5.457834754 0.117844314 QAPPHIELSNS(ph)SPDPMAEAER ddPTM_A459_MK2206_30min_R1 1 QAPPHIELSNSSPDPMAEAER 21 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 QAPPHIELSNS(0.5)S(0.5)PDPMAEAER 183.58 6.82E-15 12462000 4524.6 3941.6 3815.3 3530.9 4745.9 3919.2 4764 4107.1 3052.8 3712.8 TRUE FALSE 4139.75901 3685.001124 3556.328066 3802.85053 4556.860753 4141.101717 4446.202252 4071.192058 3370.149485 4172.769694 0.992089023 0.88310676 0.852270393 0.91134925 1.09204703 0.992410802 1.065527834 0.975657023 0.807652886 1 12.02678958 -4.438365723 21.11395912 0.956015404 3.188282884 0.017043126 0.086155579 1883.653359 494061.1128 0.022263596 10028.30259 3.64E-05 4.438365723 2.23226748 QAPPHIELSNS(ph)SPDPMAEAER ddPTM_A459_MK2206_30min_R2 3 QAPPHIELSNSSPDPMAEAER 21 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 QAPPHIELSNS(0.847)S(0.153)PDPMAEAER;QAPPHIELS(0.002)NS(0.499)S(0.499)PDPMAEAER;QAPPHIELS(0.003)NS(0.808)S(0.189)PDPMAEAER 156.02 1.27E-07 15405800 60292 67216 69534 70915 70881 69978 78874 56708 59113 71316 TRUE FALSE 64908.00188 63878.15118 71852.22886 65121.01765 68097.85579 72641.06183 68517.74906 64119.93031 64254.54189 68988.96476 0.94084615 0.92591839 1.041503219 0.943933829 0.987083311 1.052937409 0.993169695 0.929422996 0.9313742 1 16.07407799 -5.164579174 24.76516425 0.983754698 0.933381276 0.210763633 0.039846713 75.46549446 19287.68933 0.01071453 0.028347981 6.85E-06 5.164579174 -0.050373422 QAPPHIELSNSS(ph)PDPMAEAER ddPTM_A459_MK2206_30min_R1 1 QAPPHIELSNSSPDPMAEAER 21 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 QAPPHIELSNS(0.236)S(0.764)PDPMAEAER 149.93 1.30E-06 10210000 1185.2 926.89 1004.4 875.74 1525 1240.2 1324.8 1203.7 995.92 790.33 TRUE FALSE 1084.392516 866.5492925 936.2241264 943.1896465 1464.256021 1310.419052 1236.425009 1193.176178 1099.449448 888.2420471 1.220829975 0.975577879 1.054019149 1.061861065 1.648487623 1.475295002 1.391991083 1.343300716 1.237781359 1 9.794809056 -6.214698693 24.77666499 1.375057748 1.069032746 0.383228375 0.166635185 352.9298302 187083.487 0.048338544 0.062404613 6.10E-07 6.214698693 -0.306025002 QAQAQES(ph)EEEEESR ddPTM_A459_MK2206_30min_R1 3 QAQAQESEEEEESR 14 0 H0YLQ7;Q9NVM6 H0YLQ7 DNAJC17 DnaJ homolog subfamily C member 17 1 QAQAQES(0.999)EEEEES(0.001)R;QAQAQES(1)EEEEESR;QAQAQES(1)EEEEESR 254.72 4.97E-28 28070000 2968.31 3154.32 2960.53 2364.63 3055.32 2673.96 3516.76 2824.77 2840.75 2478.644 TRUE FALSE 2715.839647 2948.973195 2759.577472 2546.754212 2933.620135 2825.357304 3282.163357 2800.073334 3136.056128 2785.717132 0.974915801 1.058604681 0.990616542 0.914218527 1.053093331 1.014229791 1.178211284 1.005153503 1.125762588 1 11.44383306 -6.749272008 2.33030385 1.07666841 0.991937921 0.258165814 0.062242345 0.393545836 4.386281747 0.023063282 0.021463426 1.78E-07 6.749272008 -0.084730489 QAQAQES(ph)EEEEESR ddPTM_A459_MK2206_30min_R2 2 QAQAQESEEEEESR 14 0 H0YLQ7;Q9NVM6 H0YLQ7 DNAJC17 DnaJ homolog subfamily C member 17 1 QAQAQES(0.84)EEEEES(0.16)R;QAQAQES(1)EEEEESR 174.4 8.65E-05 18823300 8082 10410 8599.1 9964.5 8940.8 8819.3 8519.4 6791.4 6722.4 7588 TRUE FALSE 8700.764134 9893.054538 8885.789702 9150.368475 8589.739268 9154.924641 7400.792546 7679.059298 7307.102201 7340.404181 1.185324938 1.347753379 1.210531393 1.246575563 1.170199768 1.24719626 1.008226845 1.046135759 0.995463195 1 12.84164379 -7.26189093 24.99587923 1.016301086 1.236263824 0.843661461 0.046832046 15.35700672 850054.4095 0.018619515 0.013415276 5.47E-08 7.26189093 0.219962738 QAQEYEALLNIK ddPTM_A459_MK2206_30min_R1 1 QAQEYEALLNIK 12 0 P05783;F8VZY9;CON__P05784 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 155.99 0.0059716 44955000 2695.4 2824.7 2971.3 2630.5 3055.4 2835.2 3034.6 3446 2223.2 2748.3 FALSE TRUE 2466.142076 2640.811517 2769.616435 2833.101566 2933.696948 2995.726574 2832.167371 3415.871985 2454.309596 3088.780153 0.798419426 0.854969077 0.896669979 0.917223443 0.94979144 0.96987368 0.916920995 1.105896767 0.794588632 1 11.59282147 -4.889672791 0.683060305 0.964403428 0.711268737 0.338996143 0.072550935 3.022980145 1.177902818 0.030683815 0.582159803 1.29E-05 4.889672791 -0.253134692 QAQEYEALLNIK ddPTM_A459_MK2206_30min_R2 2 QAQEYEALLNIK 12 0 P05783;F8VZY9;CON__P05784 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 ; 173.04 0.0027743 29299000 83394 96579 94195 96052 93626 85936 100436 75464 77542 102295 FALSE TRUE 89778.70876 91783.0273 97335.41429 88204.24434 89949.77281 89206.3547 87248.63255 85327.40391 84286.463 98957.12253 0.907248579 0.927502993 0.983612011 0.891338007 0.908977247 0.901464719 0.88168118 0.862266421 0.851747311 1 16.59451593 -5.831131119 24.99961225 0.893617059 0.938260897 0.148326148 0.041991286 75.4541117 27065.26592 0.011497709 0.017053866 1.48E-06 5.831131119 0.044643838 QAQIEVVPSAS(ph)ALIIK ddPTM_A459_MK2206_30min_R2 2 QAQIEVVPSASALIIK 16 0 P30050 P30050 RPL12 60S ribosomal protein L12 1 QAQIEVVPS(0.283)AS(0.717)ALIIK;QAQIEVVPS(0.224)AS(0.776)ALIIK 133.16 0.0005328 4707200 56187 60786 50584 71089 51682 47055 71385 45188 42375 54840 TRUE FALSE 60488.71992 57767.45563 52270.44531 65280.8013 49652.705 48845.711 62012.06375 51094.22675 46060.7009 53050.57529 1.140208557 1.088912897 0.985294599 1.230538989 0.935950359 0.920738573 1.168923493 0.963122953 0.868241308 1 15.69508078 -6.29224811 24.93441338 0.98118575 1.100648106 0.33363025 0.092877924 899.1817706 727731.8211 0.029394971 0.033333341 5.10E-07 6.29224811 0.119462356 QAQQERDELADEIANSSGK ddPTM_A459_MK2206_30min_R1 1 QAQQERDELADEIANSSGK 19 1 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 187.56 7.14E-15 6957000 1319.3 1307.3 1452.1 1196.8 1373.7 1298.4 1314.2 1361.6 922.32 894.49 FALSE TRUE 1207.086607 1222.194532 1353.535498 1288.977743 1318.98262 1371.914286 1226.532116 1349.695675 1018.198465 1005.306174 1.200715402 1.215743585 1.346391311 1.282174303 1.312020809 1.364673093 1.220058274 1.342571755 1.012824243 1 9.973419238 -8.269378806 24.83855671 1.006412043 1.286470233 0.80407768 0.055112452 249.8671807 781700.1719 0.050322189 0.013944901 5.38E-09 8.269378806 0.28005819 QAQYLGMSCDGPFKPDHYRY ddPTM_A459_MK2206_30min_R1 1 QAQYLGMSCDGPFKPDHYRY 20 2 P23526-2;P23526 P23526-2 AHCY Adenosylhomocysteinase 0 61.957 0.01303 16803000 3058.9 2851.5 3154.2 3243.2 4124 3285.6 2960.3 3717.4 2315.7 1904.7 FALSE TRUE 2798.724492 2665.866832 2940.101692 3492.991826 3959.732347 3471.627833 2762.823788 3684.899164 2556.425302 2140.668616 1.307406701 1.245343073 1.373450178 1.631729358 1.849764283 1.621749302 1.290635911 1.721377675 1.194218144 1 11.06384576 -8.484578477 5.507326515 1.000703567 1.50354704 0.437894827 0.191203796 0.166301536 13.31174743 0.201358551 0.052275006 3.28E-09 8.484578477 0.502843474 QAS(ph)DTEEDDITDNQK ddPTM_A459_MK2206_30min_R2 1 QASDTEEDDITDNQK 15 0 Q6ZU65-2;Q6ZU65;C9J6Y5;H7C4P8 Q6ZU65-2 UBN2 Ubinuclein-2 1 QAS(0.999)DT(0.001)EEDDITDNQK 265.08 5.17E-37 4294900 29660 37353 33854 40071 38177 32125 40132 29124 29172 35511 TRUE FALSE 31930.7924 35498.10434 34982.67546 36797.07112 36677.97916 33347.53939 34862.62019 32930.6068 31709.32783 34352.27898 0.929510162 1.033355148 1.018350936 1.071168266 1.067701481 0.97075188 1.014856109 0.958614909 0.923063295 1 15.06811819 -7.555569765 1.681513077 0.955308297 1.022685971 0.229144606 0.043686854 0.516602332 2.841981833 0.02966351 0.014065562 2.78E-08 7.555569765 0.067377674 QAS(ph)ESSSRPH ddPTM_A459_MK2206_30min_R2 2 QASESSSRPH 10 1 A0A2R8Y653;Q9BZX2-2;Q9BZX2 A0A2R8Y653 UCK2 Uridine-cytidine kinase 2 1 QAS(0.978)ES(0.022)SSRPH;QAS(0.967)ES(0.032)SSRPH 83.53 0.021952 26717290 1230.9 1612.44 751.84 1639.86 4490.44 2706.68 6651.7 20091.1 15639.1 7070.6 TRUE FALSE 1325.13865 1532.368574 776.9059704 1505.878192 4314.122763 2809.684604 5778.3238 22717.07575 16999.36065 6839.886901 0.193736924 0.224034198 0.113584622 0.220161271 0.630730131 0.410779395 0.84479815 3.321264822 2.485327739 1 12.73975675 -7.607337271 5.603438622 2.412772624 0.323083205 0.716929618 0.550794749 0.097585459 4.974003308 0.255685631 0.14501973 2.47E-08 7.607337271 -2.08968942 QAS(ph)LDGLQQLR ddPTM_A459_MK2206_30min_R2 2 QASLDGLQQLR 11 0 Q3MII6 Q3MII6 TBC1D25 TBC1 domain family member 25 1 QAS(1)LDGLQQLR;QAS(1)LDGLQQLR 95.822 0.020842 23244000 33871 50875 42530 66000 59906 74463 46879 40665 66483 45616 TRUE FALSE 36464.1898 48348.62148 43947.92897 60607.58888 57553.78944 77296.74164 40723.73099 45980.05512 72265.57117 44127.55366 0.826336082 1.095656058 0.995929421 1.373463604 1.30425969 1.751666141 0.922864007 1.041980607 1.637651879 1 15.42939215 -5.750859923 23.81590936 1.296517834 0.984941809 0.242543733 0.256783254 179.1949628 403386.5052 0.070236019 0.119864526 1.77E-06 5.750859923 -0.311576025 QAS(ph)LPVSGSVAGDFVK ddPTM_A459_MK2206_30min_R2 1 QASLPVSGSVAGDFVK 16 0 H0Y7R3;F8W9F9;H0Y7T5;Q9Y3S1-2;Q9Y3S1-4;Q9Y3S1;E9PCD1;H0Y7J9;H0Y493 H0Y7R3 WNK2 Serine/threonine-protein kinase WNK2 1 QAS(0.708)LPVS(0.142)GS(0.151)VAGDFVK 121.26 0.0015392 2201100 11877 14374 12163 14375 13146 11451 14679 11232 11438 14318 TRUE FALSE 12786.31225 13660.20806 12568.50835 13200.51652 12629.82199 11886.77583 12751.62967 12700.06097 12432.85656 13850.80483 0.923145796 0.9862393 0.907420796 0.953050503 0.911847516 0.858201092 0.920641784 0.916918628 0.897627013 1 13.75768219 -4.378804983 16.11086431 0.92450873 0.639039008 0 0.039960511 2530.708654 368561.8379 0.009588315 8064.518712 4.18E-05 4.378804983 -0.285469722 QAS(ph)PAWK ddPTM_A459_MK2206_30min_R1 1 QASPAWK 7 0 A0A2R8Y7W8;A0A2R8Y6W5;Q16626 A0A2R8Y7W8 MEA1 Male-enhanced antigen 1 1 QAS(1)PAWK 94.409 0.024453 7019900 7701.4 7508 7283.4 6633.8 7361.3 6516.9 6863.2 6652.8 5870 5299.3 TRUE FALSE 7046.355488 7019.227835 6789.023101 7144.736425 7068.083833 6885.881246 6405.368451 6594.635271 6480.207506 5955.817292 1.18310471 1.178549894 1.139897812 1.199623171 1.186752966 1.156160592 1.075481019 1.107259499 1.088046726 1 12.54008378 -8.092672611 0.518216706 1.002045564 1.184437008 0.842798664 0.023840407 0.340930414 0.225959847 0.027085952 0.015387518 8.08E-09 8.092672611 0.182391444 QAS(ph)PAWK ddPTM_A459_MK2206_30min_R2 1 QASPAWK 7 0 A0A2R8Y7W8;A0A2R8Y6W5;Q16626 A0A2R8Y7W8 MEA1 Male-enhanced antigen 1 1 QAS(1)PAWK 83.647 0.038904 8021500 49279 44638 50927 55374 49821 47160 56527 34513 44991 44702 TRUE FALSE 53051.83813 42421.34183 52624.88076 50849.76707 47864.77721 48954.70685 49104.937 39023.9676 48904.23585 43243.3774 1.226819951 0.980990486 1.216946592 1.175897215 1.106869539 1.132074084 1.135548145 0.902426451 1.130906946 1 15.40019158 -7.686555568 16.80829939 1.012505725 1.136102153 0.33756585 0.082202516 2.818783553 630.7257577 0.036341975 0.020981086 2.06E-08 7.686555568 0.123596429 QAS(ph)PLISPLLNDQACPR ddPTM_A459_MK2206_30min_R1 1 QASPLISPLLNDQACPR 17 0 C9JME2;Q9Y4F1;Q9Y4F1-2 C9JME2 FARP1 "FERM, RhoGEF and pleckstrin domain-containing protein 1" 1 QAS(1)PLISPLLNDQACPR 106.87 0.0025053 3953100 1295.3 1322.2 1460.1 1367.7 1470.2 1338.1 1581.6 1452.9 1639.2 1586.3 TRUE FALSE 1185.127933 1236.12454 1360.99248 1473.040491 1411.638821 1413.862066 1476.09435 1440.197448 1809.600706 1782.82282 0.664748016 0.693352433 0.763391889 0.826240541 0.791799838 0.793046875 0.827953475 0.807818608 1.015019937 1 10.79994762 -2.901536498 0.098647141 1.150605188 1.16E-13 0.79379446 0.048807615 44.64675514 0.425202517 0.77524536 6.952468704 0.001254479 2.901536498 -1.150605188 QAS(ph)PLISPLLNDQACPR ddPTM_A459_MK2206_30min_R2 2 QASPLISPLLNDQACPR 17 0 C9JME2;Q9Y4F1;Q9Y4F1-2 C9JME2 FARP1 "FERM, RhoGEF and pleckstrin domain-containing protein 1" 1 QAS(0.992)PLIS(0.008)PLLNDQACPR;QAS(0.998)PLIS(0.002)PLLNDQACPR 120.11 0.0014795 2398100 8398.8 8724.1 9662.8 8114.7 7556.6 7926.9 10010.2 8143.8 11854 8897.3 TRUE FALSE 9041.818586 8290.87388 9984.952929 7451.703052 7259.889915 8228.563734 8695.848716 9208.222622 12885.03949 8606.98183 1.050521398 0.963273078 1.160099223 0.865774228 0.843488468 0.95603359 1.010324977 1.069855009 1.497045044 1 13.07129171 -8.026768883 11.93667798 1.260274517 0.979160922 0.369387731 0.139519326 1.205349457 533.1584637 0.087885365 0.034457167 9.40E-09 8.026768883 -0.281113596 QAS(ph)PTEVVER ddPTM_A459_MK2206_30min_R1 2 QASPTEVVER 10 0 Q8TB72-3;Q8TB72;C9JW01;Q8TB72-2;Q8TB72-4;A0A0A0MR59;A0A0C4DG68 Q8TB72-3 PUM2 Pumilio homolog 2 1 QAS(0.5)PT(0.5)EVVER;QAS(0.635)PT(0.365)EVVER 103.85 0.013778 115097000 6158.9 5726.2 6244.4 4986.4 6695.2 6432.9 6183.3 6075.6 4920.3 4663.2 TRUE FALSE 5635.053213 5353.423339 5820.547526 5370.453392 6428.516007 6797.125239 5770.823339 6022.48167 5431.782792 5240.912421 1.075204613 1.021467811 1.110598128 1.024717255 1.226602448 1.296935475 1.101110432 1.14912847 1.036419302 1 12.35560229 -6.2428703 24.60443126 1.148888145 1.059144954 0.156428048 0.084004403 1141.821215 1512937.089 0.025343421 0.032657041 5.72E-07 6.2428703 -0.089743191 QAS(ph)PTEVVER ddPTM_A459_MK2206_30min_R2 1 QASPTEVVER 10 0 Q8TB72-3;Q8TB72;C9JW01;Q8TB72-2;Q8TB72-4;A0A0A0MR59;A0A0C4DG68 Q8TB72-3 PUM2 Pumilio homolog 2 1 QAS(0.5)PT(0.5)EVVER 108.97 0.010355 168560000 56781 60969 57729 59873 57791 73083 67329 54333 59457 62499 TRUE FALSE 61128.19702 57941.36812 59653.65605 54981.18438 55521.83496 75864.22478 58488.62142 61434.50965 64628.46239 60459.66275 1.011057526 0.958347524 0.986668687 0.909386223 0.918328559 1.254790737 0.967399068 1.016123922 1.068951751 1 15.88368531 QAS(ph)TDAGTAGALTPQHVR ddPTM_A459_MK2206_30min_R1 6 QASTDAGTAGALTPQHVR 18 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QAS(0.714)T(0.286)DAGTAGALTPQHVR;QAS(0.809)T(0.191)DAGTAGALTPQHVR;QAS(0.75)T(0.25)DAGTAGALTPQHVR;QAS(0.737)T(0.262)DAGTAGALTPQHVR;QAS(0.767)T(0.233)DAGTAGALTPQHVR;QAS(0.756)T(0.244)DAGTAGALTPQHVR 169.41 6.52E-08 244667000 10640 9656.4 9289.7 7812.15 11221.3 9826.7 11409 9933.2 8707.5 8042.9 TRUE FALSE 9735.012127 9027.766605 8659.141047 8413.843147 10774.33186 10383.07926 10647.92643 9846.35508 9612.675785 9039.315173 1.076963458 0.998722407 0.957942154 0.930805375 1.191941165 1.148657732 1.177957204 1.089281089 1.063429652 1 13.14199776 -6.25828267 24.99991307 1.121484828 0.989283195 0.461171453 0.063432241 241.0835034 1909285.617 0.019452369 0.02404568 5.52E-07 6.25828267 -0.132201632 QAS(ph)TDAGTAGALTPQHVR ddPTM_A459_MK2206_30min_R2 6 QASTDAGTAGALTPQHVR 18 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QAS(0.932)T(0.068)DAGTAGALTPQHVR;QAS(0.742)T(0.258)DAGTAGALTPQHVR;QAS(0.764)T(0.236)DAGTAGALTPQHVR;QAS(0.749)T(0.251)DAGTAGALTPQHVR;QAS(0.761)T(0.239)DAGTAGALTPQHVR;QAS(0.5)T(0.5)DAGTAGALTPQHVR 183.24 4.63E-10 509516300 126228.3 165334 143158 167744 138566.3 164537 168299 147351 162329.8 140863 TRUE FALSE 135892.4357 157123.754 147930.8163 154038.7786 133125.4908 170798.5708 146201.1391 166610.2816 176448.9526 136266.6518 0.997253795 1.153060942 1.085598085 1.130421688 0.976948424 1.253414306 1.072904758 1.222678325 1.29487993 1 17.05607301 -6.77005567 24.99962465 1.176700922 1.077718302 0.214512737 0.094396715 300.950679 873183.4669 0.031717622 0.028396918 1.70E-07 6.77005567 -0.098982621 QAS(ph)VHDSGEEGEA ddPTM_A459_MK2206_30min_R1 2 QASVHDSGEEGEA 13 0 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-3 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 QAS(1)VHDSGEEGEA;QAS(0.998)VHDS(0.002)GEEGEA 111.88 0.0051016 5787500 4754.1 1903.84 2797.6 1913.62 6281 6293.8 5143.4 3765.9 1938.22 2000.35 TRUE FALSE 4349.73883 1779.89967 2607.706707 2061.007344 6030.81447 6650.149517 4800.293171 3732.975133 2139.704905 2248.16846 1.934792213 0.791710987 1.159924958 0.916749514 2.682545627 2.958029897 2.135201724 1.660451697 0.951754703 1 11.13453443 -2.238446709 6.798999626 1.66328051 1.333842833 0 0.743520838 0 0 0.186886978 0 0.005775017 2.238446709 -0.329437677 QAS(ph)VHDSGEEGEA ddPTM_A459_MK2206_30min_R2 2 QASVHDSGEEGEA 13 0 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-3 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 QAS(0.999)VHDS(0.001)GEEGEA;QAS(0.983)VHDS(0.017)GEEGEA 116.63 0.0037721 7559900 17937.1 46035 28794 70388 58418 73311 56618 39069 59299 43534 TRUE FALSE 19310.37817 43748.96884 29753.97759 64637.07524 56124.21579 76100.90148 49183.98859 44175.45244 64456.71983 42113.48915 0.458531899 1.038835056 0.706518937 1.534830681 1.332689761 1.807043373 1.167891561 1.048962063 1.530548077 1 15.36199479 -5.754505639 24.998264 1.359270148 0.765049115 0.528853518 0.263760215 129.5103873 466919.0889 0.071383075 0.120261646 1.76E-06 5.754505639 -0.594221033 QASASYDS(ph)EEEEEGLPMSYDEKR ddPTM_A459_MK2206_30min_R1 2 QASASYDSEEEEEGLPMSYDEKR 23 1 Q15059 Q15059 BRD3 Bromodomain-containing protein 3 1 QAS(0.007)AS(0.014)YDS(0.979)EEEEEGLPMSYDEKR;QAS(0.011)AS(0.03)YDS(0.958)EEEEEGLPMSYDEKR 137.88 2.16E-06 28357000 3417.3 2993.3 3337.2 2869.2 4176.3 3231.2 3418.3 3664.5 2208.01 2117.05 TRUE FALSE 3126.64069 2798.435626 3110.680162 3090.186281 4009.949128 3414.147752 3190.271444 3632.461663 2437.540541 2379.326137 1.314086641 1.176146297 1.307378637 1.298765324 1.685329752 1.43492214 1.340829823 1.526676653 1.024466761 1 11.21633732 -8.278012191 23.44832157 1.012233006 1.383192582 0.557162837 0.133102944 333.1467144 471348.3808 0.136738939 0.035812303 5.27E-09 8.278012191 0.370959576 QASASYDS(ph)EEEEEGLPMSYDEKR ddPTM_A459_MK2206_30min_R2 5 QASASYDSEEEEEGLPMSYDEKR 23 1 Q15059 Q15059 BRD3 Bromodomain-containing protein 3 1 QAS(0.045)AS(0.076)YDS(0.879)EEEEEGLPMSYDEKR;QAS(0.011)AS(0.095)Y(0.006)DS(0.888)EEEEEGLPMSYDEKR;QAS(0.151)AS(0.076)Y(0.006)DS(0.767)EEEEEGLPMSYDEKR;QAS(0.013)AS(0.033)YDS(0.954)EEEEEGLPMSYDEKR;QAS(0.072)AS(0.047)Y(0.001)DS(0.88)EEEEEGLPMSYDEKR 114.03 5.95E-06 47679500 102172 170975 145541 181674 177514 159690 160696 123174 149400 146335 TRUE FALSE 109994.3669 162484.6301 150393.2643 166830.6531 170543.9084 165767.1149 139596.4222 139273.2647 162394.5419 141560.1009 0.777015318 1.147813749 1.062398679 1.178514652 1.204745598 1.171001672 0.986128303 0.983845475 1.147177353 1 17.11105517 -4.756377602 24.97926227 1.100984722 0.777014813 0.589089679 0.080378306 118.6785875 585597.9594 0.0213793 0.174224173 1.75E-05 4.756377602 -0.323969909 QASDT(ph)EEDDITDNQK ddPTM_A459_MK2206_30min_R2 1 QASDTEEDDITDNQK 15 0 Q6ZU65-2;Q6ZU65;C9J6Y5;H7C4P8 Q6ZU65-2 UBN2 Ubinuclein-2 1 QAS(0.068)DT(0.931)EEDDIT(0.002)DNQK 199.15 6.85E-21 0 8240.7 11068 11456 12360 11728 8384.4 12118 10234 11287 11504 TRUE FALSE 8871.614328 10518.37921 11837.93732 11350.14846 11267.49979 8703.474217 10526.89204 11571.61894 12268.72286 11128.62542 0.797188691 0.945164278 1.063737602 1.019905697 1.012479023 0.782079896 0.945929227 1.03980667 1.102447283 1 13.44198779 -7.789355973 5.198693803 1.055915519 0.942927816 0.242602542 0.088222835 0.293585956 20.47573102 0.051694468 0.025257138 1.62E-08 7.789355973 -0.112987704 QASEGPLK ddPTM_A459_MK2206_30min_R1 1 QASEGPLK 8 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 141.2 0.031766 20484000 4300 3517.3 4025.7 3753.1 3557.8 3375.4 4005.2 4146.9 1323.9 2984.1 FALSE TRUE 3934.26242 3288.323131 3752.4467 4042.164412 3416.085292 3566.512231 3738.020416 4110.644091 1461.524143 3353.792837 1.173078545 0.980478906 1.118866574 1.205251668 1.018573734 1.063426516 1.11456509 1.225670246 0.435782475 1 11.71157786 -8.245897263 24.99122023 0.717891185 1.10669655 0.538563221 0.146021938 488.4166061 785361.3221 0.091116792 0.034173283 5.68E-09 8.245897263 0.388805365 QASGDTPTT(ph)PK ddPTM_A459_MK2206_30min_R2 1 QASGDTPTTPK 11 0 A0A087WWW8;Q9Y6J0-2;Q9Y6J0;B5MEB3 A0A087WWW8 CABIN1 Calcineurin-binding protein cabin-1 1 QASGDT(0.004)PT(0.1)T(0.896)PK 136.01 0.0033918 2505300 43707 37760 35252 28265 24343 20136 24311 19183 18104 26241 TRUE FALSE 47053.24152 35884.89331 36427.28409 25955.65908 23387.17151 20902.28959 21118.9365 21690.28397 19678.6532 25384.75832 1.853602108 1.413639352 1.435006141 1.022489904 0.921307629 0.823418893 0.83195342 0.854460921 0.775215306 1 14.6316749 -5.322611119 0.829619618 0.830410169 1.963148297 0.920246669 0.095355509 0.30586064 0.273290456 0.036835823 0.275489405 4.76E-06 5.322611119 1.132738128 QASGT(ph)PQPALR ddPTM_A459_MK2206_30min_R1 2 QASGTPQPALR 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 QAS(0.168)GT(0.832)PQPALR;QAS(0.043)GT(0.957)PQPALR 109.83 0.013914 9451600 8660.1 8859.5 9225.8 7782.7 10024.4 9408.2 10269 8011.2 7525.9 7385.4 TRUE FALSE 7923.513019 8282.74494 8599.578401 8382.124903 9625.106921 9940.884154 9583.973747 7941.158923 8308.244237 8300.359109 0.954598821 0.997877903 1.036048957 1.009850874 1.159601265 1.197645069 1.154645675 0.956724742 1.000949974 1 13.01895804 -5.55551291 1.552438167 1.082140406 0.971193325 0.194238983 0.076109405 0.746751369 3.449390386 0.026688681 0.07950299 2.78E-06 5.55551291 -0.110947081 QASGT(ph)PQPALR ddPTM_A459_MK2206_30min_R2 1 QASGTPQPALR 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 QAS(0.002)GT(0.998)PQPALR 99.834 0.039437 31129000 51220 55566 64919 63063 62039 53353 53314 42873 56236 49752 TRUE FALSE 55141.44258 52806.67324 67083.36706 57910.55117 59603.03714 55383.3858 46313.80776 48476.64831 61127.30563 48128.59631 1.145710592 1.09719953 1.393835935 1.203246211 1.238412123 1.150737608 0.962292926 1.007231709 1.270082868 1 15.55460673 -7.017686084 6.203850316 1.059410419 1.216516626 0.325981877 0.105570517 0.205858552 30.99584969 0.040187073 0.032656596 9.60E-08 7.017686084 0.157106207 QASPT(ph)EVVER ddPTM_A459_MK2206_30min_R1 2 QASPTEVVER 10 0 Q8TB72-3;Q8TB72;C9JW01;Q8TB72-2;Q8TB72-4;A0A0A0MR59;A0A0C4DG68 Q8TB72-3 PUM2 Pumilio homolog 2 1 QAS(0.112)PT(0.888)EVVER;QAS(0.403)PT(0.597)EVVER 111.66 0.020375 112565000 7799.7 6403 7004.4 6073.2 8915.2 8870.2 8200.6 7637.1 5771 5404.2 TRUE FALSE 7136.294557 5986.163536 6528.960843 6540.958916 8560.088706 9372.423059 7653.552937 7570.32964 6370.916102 6073.713096 1.174947589 0.985585496 1.074953779 1.076929189 1.409366654 1.543112576 1.260111042 1.246408831 1.048932671 1 12.56836305 -6.215715452 14.98923061 1.278667425 1.071252154 0.22127832 0.153938141 6.734106889 2206.125892 0.047116266 0.060815541 6.09E-07 6.215715452 -0.207415271 QASPT(ph)EVVER ddPTM_A459_MK2206_30min_R2 2 QASPTEVVER 10 0 Q8TB72-3;Q8TB72;C9JW01;Q8TB72-2;Q8TB72-4;A0A0A0MR59;A0A0C4DG68 Q8TB72-3 PUM2 Pumilio homolog 2 1 QAS(0.292)PT(0.708)EVVER;QAS(0.122)PT(0.878)EVVER 115.12 0.01578 220681000 106474 127197 107624 126443 126729 133732 117045 99169 112707 104449 TRUE FALSE 114625.7313 120880.5819 111212.1304 116112.2024 121752.9827 138821.265 101676.8509 112130.7288 122510.0511 101040.8377 1.134449535 1.196353719 1.100665167 1.149161122 1.204987859 1.373912451 1.006294615 1.109756524 1.212480557 1 16.62457898 -11.10696439 0.44286157 0.889273741 1.169788763 0.227200637 0.090783197 55.84007654 5.05440517 6.881391253 0.05196914 7.82E-12 11.10696439 0.280515022 QASQLS(ph)LESTVGPCGER ddPTM_A459_MK2206_30min_R2 2 QASQLSLESTVGPCGER 17 0 Q9H426;Q9H426-2 Q9H426 RIMS4 Regulating synaptic membrane exocytosis protein 4 1 QAS(0.025)QLS(0.973)LES(0.002)TVGPCGER;QASQLS(0.997)LES(0.002)T(0.001)VGPCGER 138.46 0.00050889 7398800 27382.9 26380 24518.6 28283 31396 31092 30915 23992.2 25007.6 28854 TRUE FALSE 29479.35588 25070.00756 25336.03789 25972.18843 30163.23529 32275.22785 26855.82336 27128.06292 27182.71584 27912.49634 1.056134697 0.898164294 0.907695162 0.930486049 1.08063553 1.156300298 0.962143372 0.971896694 0.973854703 1 14.76862354 -4.448840677 20.54262725 0.988440675 3.302614299 0.071330276 0.074844349 584.412826 172613.3429 0.020175248 4006.436469 3.56E-05 4.448840677 2.314173623 QASTDAGT(ph)AGALTPQHVR ddPTM_A459_MK2206_30min_R1 1 QASTDAGTAGALTPQHVR 18 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QAS(0.008)T(0.008)DAGT(0.983)AGALT(0.001)PQHVR 212.59 1.63E-11 32368000 1910.6 1752.8 1694.7 1428 2144 2189.2 1734.1 1927 1427.8 1316.3 TRUE FALSE 1748.093437 1638.692401 1579.668486 1537.984807 2058.59994 2313.150612 1618.421353 1910.152442 1576.224919 1479.373182 1.181644671 1.107693733 1.067795811 1.03961923 1.391535257 1.563601829 1.093991275 1.291190395 1.065468091 1 10.53077031 -6.24366883 24.82893727 1.258307211 1.09755356 0.136888909 0.15948704 1347.616954 1882883.698 0.048031657 0.061870998 5.71E-07 6.24366883 -0.160753651 QASTDAGTAGALT(ph)PQHVR ddPTM_A459_MK2206_30min_R1 2 QASTDAGTAGALTPQHVR 18 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QASTDAGTAGALT(1)PQHVR;QASTDAGTAGALT(1)PQHVR 161.31 1.30E-05 7133600 2869.36 2483.86 2862.8 2370.65 4427 3448.6 3910.3 3567.1 2381.35 2529.52 TRUE FALSE 2625.305864 2322.160263 2668.481112 2553.237874 4250.663216 3643.856752 3649.451022 3535.913221 2628.899854 2842.896035 0.923461791 0.816829119 0.938648857 0.898111589 1.495187711 1.281741122 1.283708928 1.243771555 0.924725992 1 11.47314562 -6.166225715 11.03078086 1.224759013 0.891202127 0.499489029 0.151525644 0.487034367 54.31987245 0.04492448 0.058024211 6.82E-07 6.166225715 -0.333556886 QASTDAGTAGALT(ph)PQHVR ddPTM_A459_MK2206_30min_R2 3 QASTDAGTAGALTPQHVR 18 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QASTDAGTAGALT(1)PQHVR;QASTDAGTAGALT(1)PQHVR;QASTDAGTAGALT(1)PQHVR 134.56 0.00051586 28921100 83162 105371 90124 107473 101698 97957 117787 64761 93301 105978 TRUE FALSE 89528.94666 100138.4294 93128.68918 98692.11211 97704.82553 101684.8223 102321.4254 73225.48506 101416.1523 102519.9465 0.873283197 0.976770207 0.908395803 0.96266254 0.95303235 0.991854031 0.998063585 0.714255982 0.989233371 1 16.64554511 -8.492102968 24.99963969 1.000000753 0.925913164 0.118180644 0.078804709 1265.166892 1027716.062 0.075965978 0.019614331 3.22E-09 8.492102968 -0.074087588 QATPGVPAQQS(ph)PSM ddPTM_A459_MK2206_30min_R2 2 QATPGVPAQQSPSM 14 0 R4GMQ1;O60341;O60341-2 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 1 QATPGVPAQQS(0.919)PS(0.081)M;QATPGVPAQQS(0.97)PS(0.03)M 126.48 0.0012939 10405600 57904 66190 60794 82693 71820 75876 77636 52030 63976 66188 TRUE FALSE 62337.17476 62903.10085 62820.84162 75936.71738 68999.98593 78763.51435 67442.29994 58830.49965 69540.51684 64028.29098 0.973587984 0.982426672 0.98114194 1.185986948 1.077648409 1.230136134 1.05332032 0.918820396 1.086090473 1 15.96642188 -5.589154701 24.99854083 1.080887373 0.978950064 0.237807079 0.081833935 81.76355668 30839.25376 0.023622918 0.040916102 2.58E-06 5.589154701 -0.101937309 QATVSWDS(ph)GGSDEAPPKPSRPGYPSPR ddPTM_A459_MK2206_30min_R1 1 QATVSWDSGGSDEAPPKPSRPGYPSPR 27 2 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;H0YBZ1;H0YB16;Q05397-6;B4DWJ1;E5RHK7;E5RG80;E5RJQ2;E9PEI4 E7ESA6;E9PEI4 PTK2 Focal adhesion kinase 1 1 QAT(0.001)VS(0.007)WDS(0.395)GGS(0.297)DEAPPKPS(0.107)RPGY(0.128)PS(0.065)PR 40.83 0.035922 19405000 2607.1 2279.2 2534.8 2186.3 2360.4 2181.1 2794.9 2536.7 2427 2517.8 TRUE FALSE 2385.352455 2130.823666 2362.744838 2354.689205 2266.38027 2304.591997 2608.457321 2514.521899 2679.295335 2829.724072 0.842962916 0.753014644 0.83497358 0.832126789 0.800919175 0.814422869 0.921806245 0.88861028 0.946839786 1 11.46644567 -7.861539712 0.692696963 0.996645096 0.803560362 0.813731808 0.030627429 0.273993815 0.264127509 0.028498737 0.013674313 1.38E-08 7.861539712 -0.193084734 QATVSWDSGGSDEAPPKPS(ph)RPGYPSPR ddPTM_A459_MK2206_30min_R1 1 QATVSWDSGGSDEAPPKPSRPGYPSPR 27 2 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;H0YBZ1;H0YB16;Q05397-6;B4DWJ1;E5RHK7;E5RG80;E5RJQ2;E9PEI4 E7ESA6;E9PEI4 PTK2 Focal adhesion kinase 1 1 QATVSWDSGGSDEAPPKPS(0.845)RPGY(0.147)PS(0.007)PR 111.33 9.66E-10 9872900 1189 1238.8 1330.4 1029.7 1027.8 1041.3 1543.5 1283.4 996.6 1115 TRUE FALSE 1087.869306 1158.153895 1240.096155 1109.007672 986.8605496 1100.257506 1440.535931 1272.179369 1100.200136 1253.134618 0.868118469 0.924205491 0.989595321 0.884986861 0.787513596 0.878004239 1.149546035 1.01519769 0.877958458 1 10.29132569 -7.148953825 22.44233376 1.012254282 0.890158395 0.375588429 0.076998483 12.2817868 2428.148715 0.031136026 0.024117876 7.10E-08 7.148953825 -0.122095887 QATVSWDSGGSDEAPPKPS(ph)RPGYPSPR ddPTM_A459_MK2206_30min_R2 2 QATVSWDSGGSDEAPPKPSRPGYPSPR 27 2 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;H0YBZ1;H0YB16;Q05397-6;B4DWJ1;E5RHK7;E5RG80;E5RJQ2;E9PEI4 E7ESA6;E9PEI4 PTK2 Focal adhesion kinase 1 1 QATVSWDS(0.016)GGS(0.012)DEAPPKPS(0.338)RPGY(0.295)PS(0.338)PR;QATVSWDS(0.004)GGS(0.001)DEAPPKPS(0.691)RPGY(0.229)PS(0.075)PR 68.158 0.0010479 43920000 46583 44569 39892 41067 42346 36727 44928 36001 34070 50162 TRUE FALSE 50149.4303 42355.76827 41221.97937 37711.69473 40683.28327 38124.67172 39028.89963 40706.45431 37033.34702 48525.21805 1.033471508 0.872860957 0.849496015 0.777156626 0.838394651 0.78566719 0.804301376 0.838872157 0.763177344 1 15.56644708 -4.578589218 1.655496502 0.821077603 1.206232453 0.469900872 0.063310509 1.345796582 2.400608199 0.015904897 0.973338274 2.64E-05 4.578589218 0.38515485 QATVSWDSGGSDEAPPKPSRPGY(ph)PSPR ddPTM_A459_MK2206_30min_R1 1 QATVSWDSGGSDEAPPKPSRPGYPSPR 27 2 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;H0YBZ1;H0YB16;Q05397-6;B4DWJ1;E5RHK7;E5RG80;E5RJQ2;E9PEI4 E7ESA6;E9PEI4 PTK2 Focal adhesion kinase 1 1 QATVSWDSGGS(0.001)DEAPPKPS(0.292)RPGY(0.646)PS(0.061)PR 66.556 0.0032021 6866600 1020.9 940.83 1384.1 1123.3 1227.1 1191.9 1419.5 1229.8 1157.1 1206.5 TRUE FALSE 934.067094 879.581796 1290.151148 1209.816761 1178.222009 1259.384348 1324.807745 1219.047988 1277.384686 1355.970329 0.688855113 0.648673336 0.951459719 0.892214774 0.8689143 0.928769842 0.977018241 0.899022613 0.942044718 1 10.40510989 -5.260794105 24.99999987 0.926581161 0.668764202 0.881820396 0.038562109 16.60799397 643415.4253 0.009953862 0.023345292 5.49E-06 5.260794105 -0.257816959 QATVSWDSGGSDEAPPKPSRPGY(ph)PSPR ddPTM_A459_MK2206_30min_R2 1 QATVSWDSGGSDEAPPKPSRPGYPSPR 27 2 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;H0YBZ1;H0YB16;Q05397-6;B4DWJ1;E5RHK7;E5RG80;E5RJQ2;E9PEI4 E7ESA6;E9PEI4 PTK2 Focal adhesion kinase 1 1 QATVSWDS(0.001)GGS(0.004)DEAPPKPS(0.192)RPGY(0.438)PS(0.364)PR 72.654 0.00097361 25321000 31674 39130 38356 40973 34846 35554 39292 32142 35786 35742 TRUE FALSE 34098.98579 37186.8611 39634.7699 37625.37483 33477.77095 36907.03238 34132.9132 36343.06976 38898.60159 34575.74147 0.986211267 1.075518833 1.14631728 1.088201532 0.968244484 1.067425623 0.987192516 1.05111469 1.125025811 1 15.07747257 QATVSWDSGGSDEAPPKPSRPGYPS(ph)PR ddPTM_A459_MK2206_30min_R1 3 QATVSWDSGGSDEAPPKPSRPGYPSPR 27 2 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;H0YBZ1;H0YB16;Q05397-6;B4DWJ1;E5RHK7;E5RG80;E5RJQ2;E9PEI4 E7ESA6;E9PEI4 PTK2 Focal adhesion kinase 1 1 QATVSWDS(0.002)GGS(0.002)DEAPPKPS(0.324)RPGY(0.304)PS(0.369)PR;QATVSWDS(0.002)GGS(0.004)DEAPPKPS(0.191)RPGY(0.372)PS(0.43)PR;QATVSWDSGGSDEAPPKPS(0.022)RPGY(0.224)PS(0.754)PR 99.549 0.00010378 25037300 2648.9 2327.98 2554.62 2356.56 2655.11 2190.84 2830.68 2220.29 2627.04 3038.07 TRUE FALSE 2423.597145 2176.428079 2381.219512 2538.06266 2549.351346 2314.883468 2641.850502 2200.878239 2900.130209 3414.449048 0.709806212 0.637417062 0.697394947 0.743330073 0.746636225 0.677966909 0.773726732 0.644577854 0.849369889 1 11.73743709 -8.524742133 3.835511174 0.999537753 0.706268873 0.836821415 0.041651206 0.069498309 2.943102803 0.039874941 0.010472905 2.99E-09 8.524742133 -0.29326888 QATVSWDSGGSDEAPPKPSRPGYPS(ph)PR ddPTM_A459_MK2206_30min_R2 1 QATVSWDSGGSDEAPPKPSRPGYPSPR 27 2 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;H0YBZ1;H0YB16;Q05397-6;B4DWJ1;E5RHK7;E5RG80;E5RJQ2;E9PEI4 E7ESA6;E9PEI4 PTK2 Focal adhesion kinase 1 1 QATVSWDSGGSDEAPPKPS(0.205)RPGY(0.18)PS(0.615)PR 59.628 0.002172 78701000 22104 19109 19695 22584 18697 20640 23373 16271 15389 20173 TRUE FALSE 23796.29924 18160.07485 20351.62147 20738.81496 17962.86184 21425.46966 20304.09702 18397.67557 16727.5074 19514.75666 1.219400254 0.93058167 1.042883692 1.062724753 0.92047583 1.097911188 1.040448384 0.942757109 0.857172226 1 14.25227785 -4.751471025 24.92884554 0.993502048 1.219400729 0.484709825 0.071295491 366.5011647 916480.6416 0.018142669 0.238150174 1.77E-05 4.751471025 0.225898682 QAVDVS(ph)PLRR ddPTM_A459_MK2206_30min_R1 1 QAVDVSPLRR 10 1 M0R0F0;M0R0R2;P46782;M0QZN2 M0R0F0 RPS5 "40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed" 1 QAVDVS(1)PLRR 72.891 0.034308 3539400 2800.9 2791 3243.3 2651.8 3101.7 3266.3 3283.4 2636.7 2805.8 2621.7 TRUE FALSE 2562.668747 2609.305393 3023.153832 2856.042095 2978.152721 3451.235083 3064.370377 2613.64761 3097.472951 2946.495989 0.869734341 0.885562174 1.026016612 0.969301199 1.010743857 1.17130147 1.040004938 0.887035862 1.051239493 1 11.52478459 -5.240934438 5.751931712 1.01966426 0.875453908 0.416278392 0.067189039 0.17549755 20.81222574 0.01854525 0.047510938 5.74E-06 5.240934438 -0.144210351 QAYS(ph)PRR ddPTM_A459_MK2206_30min_R2 2 QAYSPRR 7 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 QAYS(1)PRR;QAYS(1)PRR 73.887 0.029432 3808400 3683.6 12708.2 6436 10034.7 14928.9 13315.6 11550.3 6250.4 14742.7 7029.7 TRUE FALSE 3965.619248 12077.12927 6650.573028 9214.832911 14342.71637 13822.33449 10033.73174 7067.348741 16024.9934 6800.321465 0.583151733 1.775964464 0.977979212 1.355058428 2.109123289 2.032600159 1.475479033 1.039266861 2.356505274 1 12.73138723 -4.754200809 24.86559451 1.573607422 0.583149873 0.286533469 0.466694806 319.9347953 1098924.365 0.115528004 1.149158197 1.76E-05 4.754200809 -0.990457549 QCEGIT(ph)SPEGSK ddPTM_A459_MK2206_30min_R2 1 QCEGITSPEGSK 12 0 Q9Y570-2;Q9Y570;Q9Y570-4 Q9Y570-2 PPME1 Protein phosphatase methylesterase 1 1 QCEGIT(0.647)S(0.352)PEGS(0.001)K 102.87 0.026226 28577000 122430 138010 141940 134110 159630 112870 161060 124050 114530 157260 TRUE FALSE 131803.3349 131156.6241 146672.2088 123152.784 153362.1241 117165.3469 139912.6285 140263.7609 124491.6124 152128.6191 0.86639408 0.862143 0.964132914 0.809530677 1.008108304 0.770172947 0.91969959 0.922007718 0.818331312 1 17.21493206 -11.33370707 4.079984286 1.01951113 0.88462814 0.20502287 0.069403567 0.012776007 0.000592369 0.069700885 0.014937278 4.64E-12 11.33370707 -0.134882989 QCEGITS(ph)PEGSK ddPTM_A459_MK2206_30min_R2 1 QCEGITSPEGSK 12 0 Q9Y570-2;Q9Y570;Q9Y570-4 Q9Y570-2 PPME1 Protein phosphatase methylesterase 1 1 QCEGIT(0.475)S(0.511)PEGS(0.014)K 204.17 3.64E-05 31642000 103600 107810 107150 100250 119880 80305 125260 73982 89688 120400 TRUE FALSE 111531.6957 102456.3122 110722.3275 92059.25432 115172.9089 83361.06305 108813.2115 83651.70142 97488.90012 116471.3579 0.957589039 0.879669595 0.950639965 0.790402516 0.988851774 0.715721569 0.934248673 0.718216933 0.837020379 1 16.82961569 -6.746476168 24.99887783 0.829255478 0.90678723 0.11811747 0.095381522 472.0812875 788699.9618 0.029261313 0.029150692 1.79E-07 6.746476168 0.077531752 QCHPALDGQR ddPTM_A459_MK2206_30min_R2 1 QCHPALDGQR 10 0 P22692-2;P22692 P22692-2 IGFBP4 Insulin-like growth factor-binding protein 4 0 87.568 0.047027 1266100 12948 11134 9768.3 10408 8398.4 11679 10712 8103.9 7407.3 9153.5 FALSE TRUE 13939.30884 10581.10175 10093.97025 9557.633106 8068.636617 12123.45253 9305.501533 9163.107555 8051.573565 8854.822045 1.574205418 1.194953631 1.139940497 1.079370433 0.911213865 1.369135649 1.050896504 1.034815551 0.909286886 1 13.1122476 QDDGSSSAS(ph)PSVQGAPR ddPTM_A459_MK2206_30min_R1 2 QDDGSSSASPSVQGAPR 17 0 Q9NQA3 Q9NQA3 WASH6P WAS protein family homolog 6 1 QDDGSS(0.007)S(0.024)AS(0.94)PS(0.029)VQGAPR;QDDGS(0.001)S(0.025)S(0.033)AS(0.939)PS(0.001)VQGAPR 262.37 2.18E-40 15894500 5452.3 5429.8 5813.6 4806.3 6299.1 5320.4 6049.5 5850.9 4835 4467.2 TRUE FALSE 4988.553254 5076.319033 5418.98903 5176.482059 6048.193508 5621.63645 5645.948893 5799.746198 5337.615552 5020.630462 0.99361092 1.011091948 1.079344332 1.031042236 1.20466813 1.119707274 1.124549782 1.155182849 1.063136511 1 12.29365283 -5.533573189 1.369427671 1.116657301 0.994678116 0.319284989 0.055968752 0.518942822 1.795846156 0.017381285 0.059433273 2.93E-06 5.533573189 -0.121979184 QDDGSSSAS(ph)PSVQGAPR ddPTM_A459_MK2206_30min_R2 1 QDDGSSSASPSVQGAPR 17 0 Q9NQA3 Q9NQA3 WASH6P WAS protein family homolog 6 1 QDDGSSS(0.003)AS(0.988)PS(0.009)VQGAPR 257.88 4.51E-40 12946000 16637 16469 14613 18125 17772 14313 18792 13158 14899 15408 TRUE FALSE 17910.74151 15651.17341 15100.19013 16644.12952 17074.18198 14857.69124 16324.58783 14877.79578 16194.88809 14905.23822 1.201640742 1.05004517 1.013079422 1.1166631 1.145515538 0.996810049 1.095224886 0.998158873 1.086523264 1 13.86353181 -6.76472171 24.99953419 1.038970942 1.097812198 0.263718639 0.057671748 146.1738086 1113309.917 0.019986789 0.018332935 1.72E-07 6.76472171 0.058841257 QDDGSSSASPS(ph)VQGAPR ddPTM_A459_MK2206_30min_R2 1 QDDGSSSASPSVQGAPR 17 0 Q9NQA3 Q9NQA3 WASH6P WAS protein family homolog 6 1 QDDGS(0.002)S(0.005)S(0.062)AS(0.211)PS(0.721)VQGAPR 147.28 0.00039436 10155000 12039 10129 10577 11613 9469.2 11023 11515 8579.8 10310 12186 TRUE FALSE 12960.7151 9626.008589 10929.6319 10664.18075 9097.391629 11442.48799 10003.06667 9701.209319 11206.74516 11788.37182 1.099449126 0.816568118 0.927153645 0.904635595 0.771725881 0.970658897 0.848553712 0.822947347 0.950660985 1 13.52507685 -4.750203385 24.97617413 0.883887115 1.0994496 0.438879779 0.070602335 430.7536425 957448.2197 0.01636683 0.24684386 1.78E-05 4.750203385 0.215562485 QDDS(ph)PPRPIIGPALPPGFIK ddPTM_A459_MK2206_30min_R1 2 QDDSPPRPIIGPALPPGFIK 20 1 A0A0A0MRI1;Q8IXQ4-4;Q8IXQ4 A0A0A0MRI1 GPALPP1 GPALPP motifs-containing protein 1 1 QDDS(1)PPRPIIGPALPPGFIK;QDDS(1)PPRPIIGPALPPGFIK 101.16 0.00039414 55088000 15019.7 14023.4 14215.7 12493.2 14038.9 12547.2 14280.1 14109.1 13288 12230.7 TRUE FALSE 13742.19564 13110.47411 13250.77789 13455.42843 13479.70089 13257.61162 13327.50058 13985.74563 14669.33515 13745.93145 0.999728224 0.953771242 0.963978173 0.978866254 0.980632046 0.964475319 0.969559657 1.017446193 1.06717651 1 13.74671705 -7.863979218 4.094888277 1.036007999 0.972067593 0.639684388 0.019145408 0.121559125 3.676194524 0.010641666 0.004824918 1.37E-08 7.863979218 -0.063940407 QDDS(ph)PPRPIIGPALPPGFIK ddPTM_A459_MK2206_30min_R2 2 QDDSPPRPIIGPALPPGFIK 20 1 A0A0A0MRI1;Q8IXQ4-4;Q8IXQ4 A0A0A0MRI1 GPALPP1 GPALPP motifs-containing protein 1 1 QDDS(1)PPRPIIGPALPPGFIK;QDDS(1)PPRPIIGPALPPGFIK 69.081 0.0069046 37685000 220526 250998 224598 273693 235530 193685 258768 220307 202692 243601 TRUE FALSE 237409.6401 238533.8043 232085.9852 251331.4064 226281.9088 201055.8184 224791.4508 249101.8813 220321.7838 235652.3193 1.007457261 1.012227696 0.984866119 1.06653483 0.96023629 0.853188371 0.953911472 1.057073752 0.934944262 1 17.84630036 -6.412418579 11.19014795 0.956790321 1.014967863 0.229237263 0.051741804 0.879543609 84.23664238 0.017013521 0.019288802 3.87E-07 6.412418579 0.058177542 QDDSPS(ph)GASYGQDYDLS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 QDDSPSGASYGQDYDLSPSR 20 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 QDDS(0.023)PS(0.977)GASYGQDYDLS(0.998)PS(0.002)R;QDDS(0.424)PS(0.576)GASYGQDYDLS(0.922)PS(0.078)R 234.03 1.60E-65 0 35944 33827 37027 40595 40804 32131 45346 32672 31415 41531 TRUE FALSE 38695.90028 32147.20037 38261.4617 37278.25864 39201.82994 33353.76772 39392.01573 36942.34258 34147.41991 40175.84687 0.963163276 0.800162358 0.952349849 0.927877358 0.975756157 0.830194515 0.980489991 0.919516213 0.849948976 1 15.29404081 QDDSPSGAS(ph)YGQDYDLS(ph)PSR ddPTM_A459_MK2206_30min_R2 1 QDDSPSGASYGQDYDLSPSR 20 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 QDDS(0.008)PS(0.241)GAS(0.751)YGQDYDLS(0.953)PS(0.047)R 167.87 5.19E-08 6331500 21037 21198 20059 18500 20078 18728 23522 19237 21407 21746 TRUE FALSE 22647.60889 20145.33814 20727.75705 16988.49082 19289.63684 19440.70716 20433.53315 21751.34195 23268.94217 21036.4298 1.076589949 0.957640547 0.985326752 0.807574811 0.916963431 0.924144798 0.971340353 1.033984481 1.10612601 1 14.36060226 -7.72394675 2.903372887 1.05741899 0.940112238 0.314580034 0.067227206 0.309577661 5.27269237 0.041642703 0.019758952 1.89E-08 7.72394675 -0.117306752 QDDSPSGASYGQDYDLS(ph)PSR ddPTM_A459_MK2206_30min_R1 1 QDDSPSGASYGQDYDLSPSR 20 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 QDDSPSGASYGQDYDLS(0.999)PS(0.001)R 281.95 4.76E-72 7428300 2046.3 2441.5 2189.8 1991.5 2149.6 2153.3 2107.1 1606.9 1765.8 1330 TRUE FALSE 1872.251439 2282.557906 2041.162477 2144.885675 2063.97688 2275.217985 1966.539204 1592.851043 1949.361229 1494.770441 1.252534428 1.527029063 1.365535751 1.434926472 1.380798565 1.522118663 1.315612852 1.065615829 1.304120804 1 10.54570822 -7.580019681 4.946531658 1.141704951 1.416785889 0.609497203 0.103538742 0.131033093 6.643055714 0.04640193 0.026349968 2.63E-08 7.580019681 0.275080939 QDDSPSGASYGQDYDLS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 QDDSPSGASYGQDYDLSPSR 20 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 QDDSPSGASYGQDYDLS(1)PSR;QDDSPSGASYGQDYDLS(1)PSR 301.9 1.20E-100 23968000 42685 45323 47983 55918 58209 55180 47240 43567 46552 48782 TRUE FALSE 45952.99642 43072.32573 49582.72927 51349.32053 55923.42218 57279.91357 41037.33125 49261.35649 50601.00881 47190.24734 0.97378164 0.912737868 1.050698652 1.088134168 1.185063129 1.213808293 0.869614668 1.0438885 1.07227683 1 15.52620111 -5.355759863 5.022956262 1.071742079 0.943913291 0.225110248 0.090605641 0.319481695 12.84561862 0.02563933 0.055623909 4.41E-06 5.355759863 -0.127828788 QDDSSSSAS(ph)PSVQGAPR ddPTM_A459_MK2206_30min_R1 1 QDDSSSSASPSVQGAPR 17 0 C4AMC7;Q6VEQ5;A8K0Z3;A8MWX3 C4AMC7 WASH3P;WASH2P;WASH1;WASH4P Putative WAS protein family homolog 3;WAS protein family homolog 2;WAS protein family homolog 1;Putative WAS protein family homolog 4 1 QDDSS(0.002)S(0.002)S(0.06)AS(0.667)PS(0.268)VQGAPR 201.9 4.01E-08 3240800 1139.6 1286.2 1570 1148.3 1320.5 1123.1 1397.3 1422.8 743.13 919.43 TRUE FALSE 1042.671036 1202.468146 1463.432774 1236.742265 1267.901689 1186.688951 1304.088667 1410.36061 820.3810228 1033.33593 1.009033951 1.163675927 1.416221707 1.196844346 1.226998551 1.148405777 1.262018119 1.364861677 0.793915124 1 10.01309362 -8.265243155 24.99967963 0.896957542 1.225944821 0.556691663 0.116545268 251.2638476 1651352.645 0.099019341 0.029368896 5.43E-09 8.265243155 0.328987279 QDDSSSSAS(ph)PSVQGAPR ddPTM_A459_MK2206_30min_R2 1 QDDSSSSASPSVQGAPR 17 0 C4AMC7;Q6VEQ5;A8K0Z3;A8MWX3 C4AMC7 WASH3P;WASH2P;WASH1;WASH4P Putative WAS protein family homolog 3;WAS protein family homolog 2;WAS protein family homolog 1;Putative WAS protein family homolog 4 1 QDDSSSS(0.01)AS(0.801)PS(0.188)VQGAPR 217.35 9.44E-12 3589200 36732 36605 30743 38529 38356 41109 38554 33163 34122 41863 TRUE FALSE 39544.23016 34787.24893 31767.95628 35381.05745 36849.95072 42673.4318 33491.81349 37497.51797 37089.86988 40497.01374 0.976472745 0.859007757 0.784451824 0.873670777 0.909942421 1.05374268 0.827019338 0.925932915 0.915866788 1 15.30552791 -6.351770503 4.322007517 0.936737558 0.866014978 0.174601537 0.070354962 0.417686177 13.85264991 0.022669948 0.026025962 4.45E-07 6.351770503 -0.07072258 QDEHGYISR ddPTM_A459_MK2206_30min_R1 4 QDEHGYISR 9 0 P04792 P04792 HSPB1 Heat shock protein beta-1 0 ;;; 146.71 0.0024114 149843000 30585.1 29066.2 30314.6 24718.8 34159.8 27600.29 31426.5 31859.7 24307 24909.4 FALSE TRUE 27983.67664 27173.9851 28256.92941 26622.64626 32799.14283 29162.99457 29330.09553 31581.154 26833.79963 27995.36453 0.999582506 0.970660163 1.00934315 0.95096623 1.171591918 1.041707978 1.047676857 1.128085115 0.95850867 1 14.77290035 -6.195586882 24.99999955 1.063010944 0.983689937 0.284850431 0.058099806 237.8219399 90285.33093 0.016269462 0.021003785 6.37E-07 6.195586882 -0.079321006 QDEHGYISR ddPTM_A459_MK2206_30min_R2 4 QDEHGYISR 9 0 P04792 P04792 HSPB1 Heat shock protein beta-1 0 ;;; 143.5 0.002849 280076000 658810 880570 797750 924730 832760 854730 916700 752180 774390 741930 FALSE TRUE 709249.0001 836842.1743 824346.5868 849176.6009 800061.6581 887257.3491 796336.1888 850492.5086 841745.0424 717720.8849 0.988196129 1.165971608 1.148561515 1.183157156 1.114725341 1.236215035 1.109534647 1.184990609 1.172802771 1 19.45306338 -4.75889955 24.94032529 1.153908144 0.988195903 0.376608103 0.060265404 62.21502583 610801.2578 0.013450299 0.089109521 1.74E-05 4.75889955 -0.16571224 QDENDDDDDWNPCK ddPTM_A459_MK2206_30min_R1 2 QDENDDDDDWNPCK 14 0 Q14974;Q14974-2 Q14974 KPNB1 Importin subunit beta-1 0 ; 252.42 1.61E-26 14793000 5463.9 6088.3 6548.6 5655.4 4700.3 4602.4 5375.4 5066.6 5073.9 5100.8 FALSE TRUE 4999.166613 5691.950563 6104.099277 6090.979888 4513.077098 4862.983911 5016.816874 5022.30325 5601.350062 5732.725613 0.872040099 0.992887319 1.064781343 1.062492835 0.787248057 0.848284784 0.87511896 0.876075987 0.977083231 1 12.48500551 -4.707348723 21.85764736 0.936434959 0.872034148 0.049989164 0.088697854 17192.48503 6944351.259 0.024590982 22.8167481 1.96E-05 4.707348723 -0.064400811 QDENDDDDDWNPCK ddPTM_A459_MK2206_30min_R2 1 QDENDDDDDWNPCK 14 0 Q14974;Q14974-2 Q14974 KPNB1 Importin subunit beta-1 0 278.27 2.50E-53 42262000 44324 46018 50571 48901 53235 39846 52874 45699 35197 52747 FALSE TRUE 47717.47952 43732.81304 52257.0119 44905.63187 51144.72642 41362.36745 45931.58029 51672.01621 38258.37144 51025.86971 0.935162493 0.857071389 1.024127804 0.880056178 1.002329342 0.810615629 0.900162615 1.012663116 0.749783819 1 15.63894125 -6.743484978 24.99885575 0.895781275 0.936527571 0.063124814 0.086381947 846.9194939 1179207.952 0.027096255 0.02704363 1.81E-07 6.743484978 0.040746297 QDIMPEVDKQS(ph)GSPESR ddPTM_A459_MK2206_30min_R1 1 QDIMPEVDKQSGSPESR 17 1 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 QDIMPEVDKQS(0.515)GS(0.448)PES(0.037)R 157.62 0.00080494 0 783.91 1123.8 809.66 733.97 966.34 1026.4 1233.5 872.56 714.8 630.78 TRUE FALSE 717.234338 1050.640416 754.702535 790.5004966 927.8486315 1084.513881 1151.215466 864.9312999 789.1060179 708.9257885 1.011719914 1.482017487 1.064571987 1.11506805 1.308809253 1.529798885 1.623887132 1.220059016 1.113101019 1 9.469490802 -4.730407849 24.2085738 1.288566626 1.011717286 0.127010225 0.201864658 5992.423453 4674471.315 0.052823708 6.727765726 1.86E-05 4.730407849 -0.27684934 QDIMPEVDKQSGS(ph)PESR ddPTM_A459_MK2206_30min_R1 1 QDIMPEVDKQSGSPESR 17 1 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 QDIMPEVDKQS(0.043)GS(0.833)PES(0.123)R 81.226 0.0086416 10979000 3542.1 4329.4 3903.7 2941.2 3295.1 2845.3 3403.2 3638.5 3887.5 2673.2 TRUE FALSE 3240.825795 4047.555273 3638.72772 3167.731734 3163.84919 3006.398427 3176.178737 3606.688978 4291.619537 3004.376198 1.078701728 1.347219858 1.211142507 1.05437253 1.053080234 1.000673095 1.057184097 1.200478482 1.42845611 1 11.55284976 -5.647687485 7.031094282 1.112520588 1.228760636 0.100217632 0.133907155 0.484660909 27.89638411 0.038031491 0.06617263 2.25E-06 5.647687485 0.116240048 QDIMPEVDKQSGS(ph)PESR ddPTM_A459_MK2206_30min_R2 1 QDIMPEVDKQSGSPESR 17 1 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 QDIMPEVDKQS(0.357)GS(0.638)PES(0.005)R 151.22 0.0019523 0 9816.5 17076 13076 12095 14232 12229 15751 11479 14652 15534 TRUE FALSE 10568.05879 16228.03067 13511.94731 11106.79981 13673.18017 12694.38316 13682.87478 12979.34471 15926.40448 15027.12685 0.703265427 1.07991573 0.899170377 0.73911666 0.90989983 0.844764491 0.910544971 0.863727633 1.059843617 1 13.87528158 -8.257110008 24.85924821 1.029921818 0.874487577 0.301132441 0.09787559 393.3077508 2258411.064 0.069421281 0.024089607 5.53E-09 8.257110008 -0.155434241 QDITLEPS(ph)PTAR ddPTM_A459_MK2206_30min_R1 1 QDITLEPSPTAR 12 0 A0A0C4DGJ6;Q96DN6 A0A0C4DGJ6 MBD6 Methyl-CpG-binding domain protein 6 1 QDITLEPS(0.952)PT(0.048)AR 93.106 0.020753 3850700 1169.1 1227.1 1238.1 930.04 1337.7 1306.4 1246.8 1200.6 1153 1338.1 TRUE FALSE 1069.661906 1147.215567 1154.061222 1001.671842 1284.416576 1380.367239 1163.628247 1190.103281 1272.858476 1503.87393 0.711270994 0.762840251 0.767392265 0.666061045 0.854071974 0.917874305 0.773753852 0.791358409 0.846386423 1 10.55446792 -6.283263103 23.78920242 0.851666096 0.732351875 0.505244496 0.065668656 407.2401402 443915.2516 0.020214401 0.022944688 5.21E-07 6.283263103 -0.119314221 QDITLEPS(ph)PTAR ddPTM_A459_MK2206_30min_R2 1 QDITLEPSPTAR 12 0 A0A0C4DGJ6;Q96DN6 A0A0C4DGJ6 MBD6 Methyl-CpG-binding domain protein 6 1 QDITLEPS(0.865)PT(0.134)AR 101.2 0.01275 3558000 17911 15286 18357 19616 14152 18791 19712 16779 16521 19422 TRUE FALSE 19282.27993 14526.91947 18969.01322 18013.31005 13596.32137 19506.10467 17123.79072 18972.07291 17957.96672 18788.26173 1.026293981 0.773191244 1.009620448 0.958753413 0.72366042 1.038206991 0.911408994 1.009783299 0.955807779 1 14.19754398 QDKPLS(ph)PAGSSQEAADTPDTR ddPTM_A459_MK2206_30min_R2 1 QDKPLSPAGSSQEAADTPDTR 21 1 P13994 P13994 CCDC130 Coiled-coil domain-containing protein 130 1 QDKPLS(0.751)PAGS(0.119)S(0.119)QEAADT(0.009)PDT(0.001)R 48.146 0.042159 23588000 15959 16724 19685 17691 18073 15523 16158 12022 14398 18690 TRUE FALSE 17180.83331 15893.51048 20341.28808 16245.58871 17363.36321 16113.73864 14036.43519 13593.31668 15650.31201 18080.14683 0.950259612 0.879058706 1.125062106 0.898531901 0.96035521 0.891239368 0.776345199 0.751836631 0.865607573 1 14.14211877 -6.935617942 3.29700958 0.827748857 0.963776279 0.261083703 0.087998557 0.284538282 6.281118301 0.032849064 0.027900569 1.16E-07 6.935617942 0.136027421 QDKPMDTSVLS(ph)EEGGEPFQK ddPTM_A459_MK2206_30min_R1 3 QDKPMDTSVLSEEGGEPFQK 20 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 QDKPMDTS(0.001)VLS(0.999)EEGGEPFQK;QDKPMDTSVLS(1)EEGGEPFQK;QDKPMDTSVLS(1)EEGGEPFQK 126.29 0.0013988 8395900 7664.6 7106.9 7073.5 6425.3 6265.1 5597.9 6654.6 6310.8 6469.6 6712.5 TRUE FALSE 7012.685522 6644.239518 6593.370528 6920.177719 6015.5478 5914.84826 6210.683776 6255.625341 7142.138072 7544.095177 0.929559524 0.880720532 0.873977644 0.917297245 0.797384929 0.784036803 0.823250984 0.829208168 0.946718977 1 12.88113216 -8.443084132 3.749246682 0.998794025 0.853037015 0.535745296 0.045471964 0.176245037 4.608123633 0.048509062 0.01278702 3.61E-09 8.443084132 -0.14575701 QDKPMDTSVLS(ph)EEGGEPFQK ddPTM_A459_MK2206_30min_R2 2 QDKPMDTSVLSEEGGEPFQK 20 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 QDKPMDTSVLS(1)EEGGEPFQK;QDKPMDTSVLS(0.999)EEGGEPFQK 118.52 0.00014206 21350600 124554 109499 117779 109380 108379 90753 130614 89261 92743 126634 TRUE FALSE 134089.95 104061.4389 121705.6931 100443.3041 104123.4959 94206.66901 113464.2249 100927.7192 100809.6185 122501.943 1.094594476 0.849467661 0.993500104 0.819932335 0.84997424 0.769021835 0.92622388 0.823886681 0.822922609 1 16.90244511 -1.901172749 1.125317591 0.859078743 200 0.418145453 0.075280669 1216.338228 2.390382085 0.022261017 624205.4217 0.012555305 1.901172749 199.1409213 QDLT(ph)RT(ph)QMELNNMK ddPTM_A459_MK2206_30min_R2 1 QDLTRTQMELNNMK 14 1 J3KQF4;E7ENJ7;B4DXD0;Q2TAA8 J3KQF4 TSNAXIP1 Translin-associated factor X-interacting protein 1 2 QDLT(1)RT(1)QMELNNMK 46.964 0.044261 8276500 30691 28542 31067 33708 30790 28375 30194 23548 24394 31090 TRUE FALSE 33040.72656 27124.64578 32102.75827 30953.94857 29581.02989 29454.83051 26229.49153 26625.80445 26515.74603 30075.53585 1.098591451 0.90188404 1.067404366 1.029206885 0.983557867 0.979361786 0.872120506 0.885297758 0.881638358 1 14.87630282 -7.026128024 2.60568729 0.900518291 1.013923196 0.408876523 0.059506175 0.265551684 3.604359639 0.02355306 0.018513697 9.42E-08 7.026128024 0.113404905 QDLVPGS(ph)PDDSHPK ddPTM_A459_MK2206_30min_R2 1 QDLVPGSPDDSHPK 14 0 Q96QB1-6;Q96QB1-4;Q96QB1-1;Q96QB1 Q96QB1-6 DLC1 Rho GTPase-activating protein 7 1 QDLVPGS(0.998)PDDS(0.002)HPK 128.99 0.0014734 0 24660 28659 26598 19689 23119 15731 23537 18487 21753 19892 TRUE FALSE 26547.98856 27235.83573 27484.76404 18080.34572 22211.2319 16329.65423 20446.56363 20903.31438 23645.03662 19242.92567 1.379623297 1.415368754 1.428304849 0.939584034 1.154254414 0.848605587 1.062549634 1.086285669 1.228765159 1 14.23204054 -5.752931407 24.99994983 1.046326197 1.408526064 0.73215108 0.100349065 94.31240869 277126.0223 0.027383284 0.046473926 1.77E-06 5.752931407 0.362199868 QDMLPEIESLS(ph)R ddPTM_A459_MK2206_30min_R2 1 QDMLPEIESLSR 12 0 Q9HBT6 Q9HBT6 CDH20 Cadherin-20 1 QDMLPEIESLS(1)R 79.744 0.041462 13237000 25146 41564 29838 37872 43781 40646 31642 28063 39954 29070 TRUE FALSE 27071.19709 39499.9922 30832.78403 34777.73645 42061.93796 42192.81201 27487.36739 31730.93045 43429.1267 28121.44828 0.962653019 1.404621547 1.096415224 1.236697915 1.495724457 1.500378344 0.977452054 1.128353353 1.544341752 1 14.77938328 -4.744598672 24.72786299 1.268342966 0.962651991 0.167840065 0.201760526 1679.479093 2465892.399 0.050332256 1.376861287 1.80E-05 4.744598672 -0.305690975 QDPSVLHTEEMR ddPTM_A459_MK2206_30min_R1 1 QDPSVLHTEEMR 12 0 Q3KNR6;P50502;F8WAQ7;Q8NFI4 Q3KNR6 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 0 129.37 0.0032584 7981400 3802.9 3478.2 3552.8 2958.9 4427.9 4079.5 4419.2 3916.5 3114.5 2983.5 FALSE TRUE 3479.443385 3251.768548 3311.645835 3186.794991 4251.527367 4310.477765 4124.403231 3882.258453 3438.26342 3353.118504 1.037673849 0.969774419 0.987631612 0.950397365 1.267932333 1.2855131 1.230020122 1.157805323 1.025392755 1 11.71128776 -6.251343474 24.8658093 1.178666473 0.985274117 0.465309132 0.090597712 555.5039275 1368183.433 0.027715891 0.035348231 5.61E-07 6.251343474 -0.193392356 QDPSVLHTEEMR ddPTM_A459_MK2206_30min_R2 2 QDPSVLHTEEMR 12 0 Q3KNR6;P50502;F8WAQ7;Q8NFI4 Q3KNR6 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 0 ; 133.88 0.0023595 8639400 74139 93925 77378 120027 92002 112970 100324 77703 102750 79944 FALSE TRUE 79815.13884 89260.82108 79957.7439 110220.4102 88389.53921 117269.1525 87151.33829 87859.04889 111687.0093 77335.43383 1.03206428 1.154203405 1.033908261 1.425225213 1.142937135 1.516370268 1.126926352 1.136077533 1.444189342 1 16.23884196 -5.735268557 24.99965855 1.262395438 1.08147305 0.21654294 0.158584032 338.0502939 322919.6811 0.040697925 0.070461986 1.84E-06 5.735268557 -0.180922388 QDPVVHLS(ph)PNK ddPTM_A459_MK2206_30min_R2 2 QDPVVHLSPNK 11 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 QDPVVHLS(1)PNK;QDPVVHLS(1)PNK 102.65 0.0093084 18325400 157998 145235 146288 146428 124086 89858 172137 136621 103865 177815 TRUE FALSE 170094.4484 138022.8411 151165.1689 134464.364 119213.7602 93277.60916 149535.2051 154477.8338 112898.99 172012.9111 0.988846984 0.802398147 0.878801294 0.781710879 0.693051233 0.542270976 0.869325472 0.898059528 0.656340209 1 17.39215733 -2.419989309 0.924919498 0.770653825 19.7584594 0.176588737 0.126358835 272.0465131 3.483313031 0.042073137 10580.241 0.003801988 2.419989309 18.98780557 QDS(ph)LDIYNER ddPTM_A459_MK2206_30min_R2 1 QDSLDIYNER 10 0 Q9ULQ0-2;Q9ULQ0 Q9ULQ0-2 STRIP2 Striatin-interacting protein 2 1 QDS(1)LDIYNER 119.62 0.0053448 3591300 11357 17329 11705 14329 14345 12815 13855 15684 21139 12189 TRUE FALSE 12226.50065 16468.46706 12095.23886 13158.27486 13781.74322 13302.6838 12035.82186 17733.95265 22977.63201 11791.27393 1.036910916 1.396665632 1.025778803 1.115933269 1.168808672 1.128180372 1.020739738 1.50398954 1.948698007 1 13.52543197 -7.819071525 7.070583312 1.550786396 1.135452944 0.309182244 0.238291859 0.224400379 22.13273993 0.122309673 0.058672305 1.52E-08 7.819071525 -0.415333452 QDS(ph)LVINLNR ddPTM_A459_MK2206_30min_R2 2 QDSLVINLNR 10 0 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 QDS(1)LVINLNR;QDS(1)LVINLNR 110.92 0.0091632 3676100 22736 29116 23929 25981 26869 24584 29553 24492 20307.2 26976 TRUE FALSE 24476.68564 27670.14178 24726.78092 23858.26919 25813.98805 25519.56135 25672.6556 27693.18849 22073.48355 26095.77533 0.93795587 1.060330319 0.947539615 0.914257917 0.989201805 0.977919262 0.983785892 1.061213478 0.845864255 1 14.67152865 QDVDLCLVS(ph)SCEYK ddPTM_A459_MK2206_30min_R2 1 QDVDLCLVSSCEYK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QDVDLCLVS(0.634)S(0.366)CEYK 132.44 0.00080793 9598700 116650 79596 95285 91174 86400 53555 105330 75038 51558 95493 TRUE FALSE 125580.8137 75643.37838 98461.75434 83724.79255 83007.50187 55593.07305 91500.04448 84845.72424 56042.42164 92377.07123 1.359437055 0.818854477 1.065867894 0.906337378 0.898572565 0.601805971 0.990506013 0.918471685 0.606670258 1 16.49524719 -2.795736644 1.509570961 0.86037082 200 0.474950856 0.151291591 500.3142705 3.672524488 0.041396173 342675.9044 0.001600528 2.795736644 199.1396292 QDVDLCLVS(ph)SCEYKHPK ddPTM_A459_MK2206_30min_R1 1 QDVDLCLVSSCEYKHPK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QDVDLCLVS(0.588)S(0.412)CEYKHPK 65.16 0.024241 14291000 2380.8 2533.2 3091 2096.3 2798.5 2051.4 2297.9 2769.8 2182.3 1770 TRUE FALSE 2178.300458 2368.28822 2881.191532 2257.757389 2687.029819 2167.548495 2144.611284 2745.583931 2409.157894 1989.280963 1.095019004 1.190524749 1.448358269 1.134961542 1.350754302 1.089614054 1.078083651 1.380189115 1.211069698 1 10.95803134 -6.772482152 24.99650392 1.170946425 1.246261023 0.097113785 0.134158094 677.0053896 1532465.205 0.047653854 0.042420113 1.69E-07 6.772482152 0.075314598 QDVDLCLVSS(ph)CEYK ddPTM_A459_MK2206_30min_R1 2 QDVDLCLVSSCEYK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QDVDLCLVS(0.006)S(0.994)CEYK;QDVDLCLVSS(1)CEYK 293.29 7.10E-67 43326000 19167.1 22673.9 23692.3 15317.6 15307.4 15792.9 20617.8 16731.4 22997 28281 TRUE FALSE 17536.83749 21197.82499 22084.13269 16497.36421 14697.67384 16687.08035 19242.42418 16585.11913 25387.62045 31784.66379 0.551738965 0.666919906 0.694804665 0.519035353 0.46241401 0.525004149 0.605399645 0.521796274 0.798738052 1 14.95604321 -8.496776535 3.159107213 0.998643891 0.570858281 0.80734642 0.068080566 0.100807081 2.367483129 0.072833102 0.019378635 3.19E-09 8.496776535 -0.42778561 QDVDLCLVSS(ph)CEYK ddPTM_A459_MK2206_30min_R2 3 QDVDLCLVSSCEYK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QDVDLCLVS(0.003)S(0.997)CEYK;QDVDLCLVS(0.037)S(0.963)CEYK;QDVDLCLVS(0.124)S(0.876)CEYK 243.9 6.15E-20 16601400 253270 200735 213919 220067 199604 137552 234908 182132 139937 236541 TRUE FALSE 272660.5459 190766.7918 221050.9527 202086.8221 191766.544 142786.6377 204064.2974 205937.2778 152108.4673 228822.6865 1.19158004 0.833688279 0.966035999 0.883159031 0.838057393 0.6240056 0.891800986 0.899986277 0.664743822 1 17.80387057 -1.777388625 1.00652873 0.825774496 199.9977117 0.436658139 0.115107901 895.4421682 2.117219347 0.036007823 410117.3246 0.016695959 1.777388625 199.1719372 QDVDNAS(ph)LAR ddPTM_A459_MK2206_30min_R1 1 QDVDNASLAR 10 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 QDVDNAS(1)LAR 101.38 0.016419 15953000 4122.3 3668.3 4304.8 4312.9 5319.9 3665.2 3469.2 5170.9 2666.5 1535.9 TRUE FALSE 3771.676738 3429.493003 4012.60217 4645.080305 5107.997118 3872.720457 3237.775998 5125.691366 2943.692217 1726.178887 2.18498602 1.986754112 2.324557553 2.690961139 2.959135438 2.243522085 1.875689722 2.969385968 1.705322802 1 10.75336627 -8.524549416 6.400230229 1.000239232 2.39123626 0.618167216 0.352917481 0.078004469 21.98586014 0.353733322 0.091607575 2.99E-09 8.524549416 1.390997028 QDVDNAS(ph)LAR ddPTM_A459_MK2206_30min_R2 2 QDVDNASLAR 10 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 QDVDNAS(1)LAR;QDVDNAS(1)LAR 120.9 0.0049458 79824000 116494 134662 108471 161055 139691 152246 144371 122185 134786 111926 TRUE FALSE 125412.8702 127974.8809 112087.369 147896.2913 134206.0294 158039.8282 125414.9143 138154.999 146509.4426 108273.8638 1.158293108 1.181955427 1.035220921 1.365946371 1.239505313 1.459630447 1.158311987 1.275977361 1.35313766 1 16.72432551 -5.763427875 24.99993201 1.278789685 1.130836385 0.20555725 0.123339543 73.24456651 920870.7423 0.032318017 0.050767496 1.72E-06 5.763427875 -0.147953299 QDVDNASLAR ddPTM_A459_MK2206_30min_R1 2 QDVDNASLAR 10 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 ; 155.53 0.0072553 22969000 5325.6 5353.2 5573.1 4918.4 6333.2 6069.7 5928.8 5339.2 5223.2 4936.7 FALSE TRUE 4872.629754 5004.705707 5194.8135 5297.21602 6080.935233 6413.361169 5533.30057 5292.519937 5766.170331 5548.295666 0.878220997 0.902025777 0.936289955 0.954746527 1.096000574 1.155915538 0.997297351 0.953900126 1.039268755 1 12.43782895 -5.987795123 3.059850036 1.041318872 0.905023556 0.557252061 0.054461055 0.215131697 4.145084638 0.018439342 0.027484024 1.03E-06 5.987795123 -0.136295316 QDVDNASLAR ddPTM_A459_MK2206_30min_R2 2 QDVDNASLAR 10 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 ; 178.54 0.0013439 31268000 78209 95426 85976 96696 84887 81583 89918 70148 88753 86299 FALSE TRUE 84196.74117 90687.2836 88842.39693 88795.62748 81553.90986 84687.69823 78111.65859 79316.58445 96472.57551 83483.0707 1.008548685 1.086295495 1.064196563 1.063636337 0.976891592 1.014429603 0.935658666 0.950091842 1.155594478 1 16.34919605 -6.249804989 23.49949338 0.999908933 1.058465959 0.143276094 0.059088304 597.0515618 1205939.621 0.01740311 0.022246509 5.63E-07 6.249804989 0.058557026 QDVPPS(ph)PSQVAR ddPTM_A459_MK2206_30min_R2 2 QDVPPSPSQVAR 12 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 QDVPPS(0.842)PS(0.158)QVAR;QDVPPS(0.792)PS(0.208)QVAR 97.767 0.0159 9684700 57114 74551 68813 80185 72273 82832 75128 54770 67548 65735 TRUE FALSE 61486.69175 70848.90575 71107.19108 73633.629 69435.19888 85984.2298 65263.60336 61928.62705 73423.20294 63590.07233 0.966922815 1.114150419 1.118212143 1.157942212 1.091918854 1.352164365 1.026317489 0.973872568 1.154633109 1 15.95651393 QDVVGKT(ph)PPSTTVGSHS(ph)PPETPVLTR ddPTM_A459_MK2206_30min_R2 2 QDVVGKTPPSTTVGSHSPPETPVLTR 26 1 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 2 QDVVGKT(0.891)PPS(0.047)T(0.048)T(0.047)VGS(0.464)HS(0.501)PPET(0.003)PVLTR;QDVVGKT(0.795)PPS(0.085)T(0.094)T(0.054)VGS(0.23)HS(0.731)PPET(0.01)PVLTR 67.899 0.0018127 26128000 53042 106916 82881 98401 97919 89793 109651 70810 77729 88369 TRUE FALSE 57102.9363 101606.7069 85644.21117 90361.32353 94074.20806 93210.13554 95253.69199 80065.11013 84489.72792 85485.52677 0.667983675 1.188583738 1.001856272 1.057036518 1.10046942 1.090361598 1.114266889 0.936592581 0.988351258 1 16.38339256 -4.748818084 24.99994199 1.05416056 0.667982774 0.731551222 0.069977076 318.8848964 631601.237 0.017609843 0.308542709 1.78E-05 4.748818084 -0.386177786 QEAGDS(ph)PPPAPGTPK ddPTM_A459_MK2206_30min_R1 2 QEAGDSPPPAPGTPK 15 0 J3KR72;P49848-4;P49848-2;P49848;P49848-3 J3KR72 TAF6 Transcription initiation factor TFIID subunit 6 1 QEAGDS(0.999)PPPAPGT(0.001)PK;QEAGDS(1)PPPAPGTPK 178.52 1.98E-05 20803000 14375.3 14670.3 14597.3 14508 13625.2 12434 14281.5 13615.3 13199.9 12728.2 TRUE FALSE 13152.60525 13715.2608 13606.47595 15625.40867 13082.47943 13138.00233 13328.80719 13496.26287 14572.07684 14305.06551 0.919436911 0.958769521 0.951164882 1.092298995 0.914534745 0.91841609 0.931754362 0.943460403 1.018665509 1 13.80423848 -8.262999329 24.91537265 1.009332758 0.955214877 0.170545181 0.048962174 266.51435 4256532.282 0.041651468 0.01291798 5.46E-09 8.262999329 -0.054117881 QEAGDS(ph)PPPAPGTPK ddPTM_A459_MK2206_30min_R2 2 QEAGDSPPPAPGTPK 15 0 J3KR72;P49848-4;P49848-2;P49848;P49848-3 J3KR72 TAF6 Transcription initiation factor TFIID subunit 6 1 QEAGDS(1)PPPAPGTPK;QEAGDS(0.586)PPPAPGT(0.414)PK 206.63 2.00E-06 44439000 128327 139629 149531 154321 154837 135711 161127 127339 131993 149558 TRUE FALSE 138151.8138 132695.2269 154516.2889 141712.4807 148757.3214 140875.5772 139970.8314 143982.6445 143473.5126 144677.9347 0.954892079 0.917176674 1.06800176 0.979503066 1.028196329 0.97371847 0.967464953 0.995194221 0.99167515 1 17.14248538 -5.221926881 24.9999944 0.998404996 0.936034355 0.439610217 0.029025168 491.0422294 310686.3041 0.00721153 0.019079412 6.00E-06 5.221926881 -0.062370641 QEAKPQQAAGMLS(ph)PK ddPTM_A459_MK2206_30min_R1 2 QEAKPQQAAGMLSPK 15 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK 136.53 0.00022289 193936000 15836 20131.5 20797.8 14884.3 10213.1 10221.4 16679.6 12911.7 22938 26376 TRUE FALSE 14489.06504 18820.93569 19386.10328 16030.69136 9806.2906 10800.12683 15566.93432 12798.81437 25322.48718 29643.65801 0.488774531 0.634905978 0.653971358 0.540779797 0.330805685 0.364331785 0.525135404 0.431755567 0.854229501 1 14.85543587 -8.398849516 3.762475598 0.993883191 0.49895539 0.756020443 0.099217954 0.119740223 2.829618888 0.108140775 0.028609866 3.99E-09 8.398849516 -0.494927801 QEAKPQQAAGMLS(ph)PK ddPTM_A459_MK2206_30min_R2 5 QEAKPQQAAGMLSPK 15 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK 143.23 0.001286 376858800 573924 335994 424179 341398 315738 193910 485770 349489 232974 490583 TRUE FALSE 617864.0627 319309.0265 438320.9161 313504.6913 303340.5397 201289.3809 421987.8155 395168.4123 253237.6574 474575.3169 1.301930464 0.672831087 0.923606645 0.660600499 0.639183137 0.424146334 0.889190399 0.832677972 0.533608994 1 18.85627754 QEASES(ph)PVK ddPTM_A459_MK2206_30min_R1 2 QEASESPVK 9 0 Q01167-2;Q01167;E9PPI7;Q01167-3 Q01167-2 FOXK2 Forkhead box protein K2 1 QEAS(0.18)ES(0.82)PVK;QEASES(1)PVK 125.36 0.0050633 35601000 19706.1 21012 20587 15615 13542 12941.1 18839.2 16142.9 6395.8 20627.2 TRUE FALSE 18029.99271 19644.11498 19189.6118 16817.67001 13002.59346 13673.8139 17582.47134 16001.76433 7060.666298 23182.65326 0.777736375 0.847362671 0.827757357 0.725441985 0.560875984 0.589829548 0.758432227 0.690247322 0.30456679 1 14.50075807 -5.966524022 3.962565931 0.637332131 0.818867232 0.167923524 0.16455255 0.351604101 12.12314572 0.046334179 0.068746815 1.08E-06 5.966524022 0.181535101 QEASES(ph)PVK ddPTM_A459_MK2206_30min_R2 2 QEASESPVK 9 0 Q01167-2;Q01167;E9PPI7;Q01167-3 Q01167-2 FOXK2 Forkhead box protein K2 1 QEAS(0.215)ES(0.785)PVK;QEASES(1)PVK 121.21 0.006335 67696000 106276 98161 98979 101605 99104 80265 117331 88153 80329 110569 TRUE FALSE 114412.5723 93286.46748 102278.9105 93303.54648 95212.679 83319.54082 101925.2988 99674.89977 87315.87122 106961.1426 1.069664829 0.87215287 0.956224924 0.872312545 0.890161387 0.778970183 0.952918941 0.931879535 0.816332634 1 16.70672726 -4.757179742 24.96879478 0.89360395 1.069665092 0.399740065 0.063452251 123.8551289 725907.5453 0.015162185 0.115315891 1.75E-05 4.757179742 0.176061143 QEASTGQSPEDHASLAPPLS(ph)PDHSSLEAK ddPTM_A459_MK2206_30min_R2 1 QEASTGQSPEDHASLAPPLSPDHSSLEAK 29 0 P48681 P48681 NES Nestin 1 QEAS(0.004)T(0.003)GQS(0.016)PEDHAS(0.309)LAPPLS(0.49)PDHS(0.122)S(0.056)LEAK 43.922 0.027981 8958800 19803 37651 22952 43365 33248 42019 38458 27956 31941 21849 TRUE FALSE 21319.13291 35781.30609 23717.20822 39821.94078 31942.51646 43618.06249 33408.4184 31609.94519 34719.17044 21136.06892 1.008661213 1.692902603 1.122120122 1.884075082 1.511279916 2.063679043 1.580635384 1.495545142 1.642650323 1 14.36741946 -5.755097197 24.99805185 1.632697258 1.316395483 0.175186838 0.309807283 253.1902197 997950.1251 0.079664054 0.133813559 1.76E-06 5.755097197 -0.316301775 QEEAEEQGAGS(ph)PGQPAHLAR ddPTM_A459_MK2206_30min_R1 4 QEEAEEQGAGSPGQPAHLAR 20 0 Q96S99 Q96S99 PLEKHF1 Pleckstrin homology domain-containing family F member 1 1 QEEAEEQGAGS(1)PGQPAHLAR;QEEAEEQGAGS(1)PGQPAHLAR;QEEAEEQGAGS(1)PGQPAHLAR;QEEAEEQGAGS(1)PGQPAHLAR 339.46 6.28E-174 42893800 10143.1 10151.8 10654.7 7792.21 10315.6 11128.3 12598.1 8652.6 11127.3 11910.2 TRUE FALSE 9280.376081 9490.915975 9931.48865 8392.367364 9904.707808 11758.37473 11757.70374 8576.95123 12284.02265 13385.72549 0.693303929 0.709032617 0.741946236 0.626963953 0.739945535 0.878426405 0.878376278 0.640753558 0.917695695 1 13.70840771 -6.611135433 5.058888577 0.840778785 0.695856977 0.439380741 0.090182754 0.227575201 9.874159166 0.029596021 0.029608277 2.45E-07 6.611135433 -0.144921808 QEEAEEQGAGS(ph)PGQPAHLAR ddPTM_A459_MK2206_30min_R2 2 QEEAEEQGAGSPGQPAHLAR 20 0 Q96S99 Q96S99 PLEKHF1 Pleckstrin homology domain-containing family F member 1 1 QEEAEEQGAGS(1)PGQPAHLAR;QEEAEEQGAGS(1)PGQPAHLAR 144.73 2.00E-05 106192000 130453 150147 149925 181368 140355 154443 159098 131898 125886 157715 TRUE FALSE 140440.582 142690.9183 154923.4247 166549.6542 134843.9575 160320.4366 138208.2415 149137.5215 136835.3367 152568.7725 0.920506731 0.935256383 1.015433382 1.091636588 0.883824096 1.050807672 0.905875031 0.977510136 0.896876435 1 17.21910018 -7.297875204 24.98507713 0.943191262 0.982661202 0.076341502 0.064354759 1676.631499 1149707.777 0.026670072 0.017981447 5.04E-08 7.297875204 0.039469941 QEEEAAQQGPVVVS(ph)PASDYKDK ddPTM_A459_MK2206_30min_R1 3 QEEEAAQQGPVVVSPASDYKDK 22 1 I3L0X5;I3L4C3;O75391 I3L0X5 SPAG7 Sperm-associated antigen 7 1 QEEEAAQQGPVVVS(0.999)PASDYKDK;QEEEAAQQGPVVVS(1)PASDYKDK;QEEEAAQQGPVVVS(0.981)PAS(0.012)DY(0.007)KDK 118.97 1.82E-05 33777000 8637.26 8553.51 8805.7 6884.84 5809.97 5759.58 7301.72 6647.65 8201.81 7842.86 TRUE FALSE 7902.615681 7996.674944 8207.993618 7415.11157 5578.546592 6085.682442 6814.635582 6589.530297 9054.4175 8814.492707 0.896547986 0.907218964 0.931192967 0.841240876 0.632883454 0.690417775 0.773117161 0.747579074 1.027219353 1 13.10566183 -5.992457127 11.25153778 0.786322281 0.907125919 0.103068659 0.117812342 0.479184999 670.0697261 0.033616814 0.048860037 1.02E-06 5.992457127 0.120803638 QEEEAAQQGPVVVS(ph)PASDYKDK ddPTM_A459_MK2206_30min_R2 2 QEEEAAQQGPVVVSPASDYKDK 22 1 I3L0X5;I3L4C3;O75391 I3L0X5 SPAG7 Sperm-associated antigen 7 1 QEEEAAQQGPVVVS(0.998)PAS(0.002)DYKDK;QEEEAAQQGPVVVS(0.998)PAS(0.001)DY(0.001)KDK 111.82 2.39E-05 94208000 127264 103897 119672 113209 118433 74312 144106 105919 84796 135570 TRUE FALSE 137007.4297 98737.62606 123661.8048 103959.4626 113782.7253 77139.99523 125184.7091 119762.977 92171.4028 131146.362 1.044691043 0.752881167 0.942929738 0.792698028 0.86760108 0.588197751 0.954541988 0.913200909 0.702813264 1 17.00081826 -4.747862963 24.69632353 0.831367545 1.044691657 0.21120444 0.12139924 913.5960522 1661773.403 0.028812961 0.552535126 1.79E-05 4.747862963 0.213324112 QEEEDRDS(ph)PGPQVPDPK ddPTM_A459_MK2206_30min_R2 1 QEEEDRDSPGPQVPDPK 17 1 M0R353;Q6NSJ2-2;Q6NSJ2 M0R353 PHLDB3 Pleckstrin homology-like domain family B member 3 1 QEEEDRDS(1)PGPQVPDPK 58.755 0.036402 7605900 37620 49188 45131 48399 49194 43880 48623 37815 38534 48280 TRUE FALSE 40500.21612 46745.39545 46635.64501 44444.64688 47262.39638 45549.88415 42238.74169 42757.55034 41885.61767 46704.62755 0.867156388 1.000872888 0.998523004 0.951611204 1.011942475 0.97527561 0.904380228 0.91548852 0.896819434 1 15.51127788 -7.250579849 23.6212933 0.922129422 0.971777017 0.130154898 0.046479153 538.7918855 1171963.771 0.017313832 0.013263037 5.62E-08 7.250579849 0.049647595 QEEEQDLDGEKGPSSEGPEEEDGEGFS(ph)FKYSPGK ddPTM_A459_MK2206_30min_R2 1 QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYSPGK 34 2 P84157-2;P84157-3;P84157 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 QEEEQDLDGEKGPS(0.037)S(0.114)EGPEEEDGEGFS(0.376)FKY(0.289)S(0.184)PGK 41.933 0.016822 5220200 10421 8368 12480 7244 12483 8279.6 17656 7723.4 10526 13449 TRUE FALSE 11218.83977 7952.457288 12896.07697 6652.142028 11992.8547 8594.68598 15337.74599 8732.874898 11441.53245 13010.16023 0.862313728 0.611249758 0.991231218 0.51130362 0.921806841 0.660613384 1.178905234 0.671235 0.879430557 1 13.66735111 QEEFS(ph)PR ddPTM_A459_MK2206_30min_R2 1 QEEFSPR 7 0 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 QEEFS(1)PR 79.489 0.046662 12580000 43627 55847 50063 63414 58352 67874 60118 43659 52449 49054 TRUE FALSE 46967.11666 53073.71919 51732.07543 58232.87335 56060.80728 70456.99263 52224.43439 49365.3812 57010.91921 47453.372 0.989752987 1.118439364 1.090166478 1.22715986 1.181387221 1.484762614 1.100542115 1.040292378 1.201409232 1 15.53422299 -4.819913087 1.241086881 1.184193364 0.923400807 0.149052055 0.126633118 2.620713989 3.644719243 0.039803833 0.867520246 1.51E-05 4.819913087 -0.260792557 QEEGADAS(ph)EEDPTPAGEEDVKDAR ddPTM_A459_MK2206_30min_R1 1 QEEGADASEEDPTPAGEEDVKDAR 24 1 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 QEEGADAS(0.999)EEDPT(0.001)PAGEEDVKDAR 90.912 2.70E-05 6755600 1194.4 1763.4 1598.5 1278.5 1054.2 823.17 1126.2 1105.1 1136.1 1104.3 TRUE FALSE 1092.810008 1648.602339 1489.998274 1376.970292 1012.208982 869.777174 1051.073253 1095.438227 1254.201661 1241.109021 0.880510889 1.328329995 1.200537784 1.109467636 0.815568145 0.700806423 0.846882292 0.882628527 1.010549145 1 10.27741413 -6.192257644 5.073194164 0.860122703 1.153831527 0.459434328 0.133579931 0.18114043 8.987106785 0.04023371 0.052091315 6.42E-07 6.192257644 0.293708824 QEEGADAS(ph)EEDPTPAGEEDVKDAR ddPTM_A459_MK2206_30min_R2 1 QEEGADASEEDPTPAGEEDVKDAR 24 1 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 QEEGADAS(0.988)EEDPT(0.012)PAGEEDVKDAR 92.089 2.02E-05 11992000 27634 36677 30277 32707 32753 24779 34586 23814 24688 31882 TRUE FALSE 29749.68029 34855.67351 31286.42007 30034.73348 31466.95265 25721.98221 30044.81665 26926.57157 26835.31761 30841.69295 0.964592973 1.130147867 1.014419673 0.973835435 1.020273196 0.834000334 0.974162369 0.873057507 0.870098722 1 14.91259434 -6.329277915 1.368657722 0.907739643 1.043151169 0.378546009 0.065377125 0.395640416 1.501153084 0.024761127 0.032724873 4.69E-07 6.329277915 0.135411526 QEES(ph)T(ph)KY(ph)FNFAT(ph)SDEKKMK ddPTM_A459_MK2206_30min_R2 1 QEESTKYFNFATSDEKKMK 19 3 Q13349 Q13349 ITGAD Integrin alpha-D 4 QEES(0.985)T(0.985)KY(0.909)FNFAT(0.56)S(0.56)DEKKMK 40.962 0.047995 0 2817.6 1730.5 2149.4 2039.4 2567.8 2101.4 3274.5 1154.8 1227.5 3152.3 TRUE FALSE 3033.317622 1644.565886 2221.059923 1872.774496 2466.97527 2181.37025 2844.554217 1305.736325 1334.265731 3049.440709 0.994712772 0.539300824 0.728349929 0.614137042 0.808992699 0.715334534 0.93281178 0.428188789 0.437544408 1 11.57432895 -7.769665979 24.9971393 0.574650025 0.746424381 0.078839277 0.195746553 371.4483959 1128653.525 0.099124529 0.048896008 1.70E-08 7.769665979 0.171774357 QEGHLDSES(ph)PTNIPLTK ddPTM_A459_MK2206_30min_R2 2 QEGHLDSESPTNIPLTK 17 0 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 QEGHLDS(0.033)ES(0.967)PT(0.001)NIPLTK;QEGHLDS(0.001)ES(0.998)PT(0.002)NIPLTK 114.87 0.0011134 26130000 177027 233416 213613 228240 240900 219109 236217 178278 207804 210161 TRUE FALSE 190580.3232 221824.9009 220734.7508 209592.0619 231441.0556 227447.3465 205201.4242 201579.5467 225878.4163 203303.4638 0.937417984 1.091102418 1.085740236 1.030932076 1.13840193 1.118757852 1.009335603 0.991520474 1.111040668 1 17.63327527 -10.39588504 10.8809786 0.999999854 1.059074656 0.072931715 0.060763549 0 0 0.059041776 0.014319734 4.02E-11 10.39588504 0.059074803 QEGPATQVDSAVGTLPAT(ph)SPQSTSVQAK ddPTM_A459_MK2206_30min_R2 2 QEGPATQVDSAVGTLPATSPQSTSVQAK 28 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06 E7ETY2 TCOF1 Treacle protein 1 QEGPATQVDSAVGTLPAT(0.498)S(0.498)PQS(0.001)T(0.002)S(0.001)VQAK;QEGPATQVDSAVGTLPAT(0.404)S(0.404)PQS(0.008)T(0.137)S(0.047)VQAK 123.76 5.19E-12 17332600 60563 58846 62317 63698 60992 59598 73232 58566 51478 79129 TRUE FALSE 65199.74985 55923.79321 64394.61768 58493.66964 58597.14762 61866.04365 63616.55043 66220.77729 55955.46339 76547.02721 0.851760705 0.730580863 0.841242567 0.764153381 0.765505203 0.808209618 0.831078002 0.865099269 0.730994598 1 16.22405873 -11.47531265 2.509409806 1.152565895 0.799168868 0.626920193 0.046577051 12653450.39 6260307.358 11259063.57 0.011089114 3.35E-12 11.47531265 -0.353397027 QEGPATQVDSAVGTLPATS(ph)PQSTSVQAK ddPTM_A459_MK2206_30min_R1 1 QEGPATQVDSAVGTLPATSPQSTSVQAK 28 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06 E7ETY2 TCOF1 Treacle protein 1 QEGPATQVDSAVGTLPAT(0.241)S(0.699)PQS(0.009)T(0.037)S(0.013)VQAK 129.52 2.09E-12 7076700 911.93 929.86 1301.2 873.52 1194.1 1148.1 1034.1 993.7 1244.8 978.23 TRUE FALSE 834.3655648 869.325945 1212.878169 940.7986618 1146.536468 1213.10443 965.1170758 985.0121857 1374.201415 1099.420518 0.758913947 0.790712863 1.103197684 0.855722307 1.042855259 1.103403484 0.877841609 0.895937605 1.24993248 1 10.10252759 -5.187612655 7.094274748 1.005621456 0.77089325 0.412696918 0.114646867 0.262905748 21.68708369 0.028549128 0.076763473 6.49E-06 5.187612655 -0.234728206 QEIESETT(ph)SEEQIQEEK ddPTM_A459_MK2206_30min_R2 2 QEIESETTSEEQIQEEK 17 0 D6RGZ6;P13611-2;P13611-5;P13611 D6RGZ6 VCAN Versican core protein 1 QEIESETT(0.921)S(0.079)EEQIQEEK;QEIESETT(0.905)S(0.095)EEQIQEEK 254.68 1.02E-30 34735000 131152 125424 110859 138185 120730 101407 155276 123505 95003 139138 TRUE FALSE 141193.098 119195.6265 114554.9837 126894.8435 115989.5336 105266.1144 134888.0747 139647.5276 103266.1892 134597.9385 1.048998964 0.885567995 0.85109018 0.942769592 0.861748218 0.782078208 1.002155577 1.037516095 0.767219694 1 17.03829679 QEKPAEKPAETPVAT(ph)SPTATDSTSGDSSR ddPTM_A459_MK2206_30min_R1 3 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 P54727;P54727-2;H0Y579 P54727 RAD23B UV excision repair protein RAD23 homolog B 1 QEKPAEKPAETPVAT(0.511)S(0.38)PT(0.076)AT(0.028)DS(0.001)T(0.002)S(0.002)GDSSR;QEKPAEKPAET(0.001)PVAT(0.445)S(0.395)PT(0.084)AT(0.035)DS(0.014)T(0.014)S(0.003)GDS(0.007)S(0.002)R;QEKPAEKPAETPVAT(0.539)S(0.37)PT(0.059)AT(0.028)DS(0.002)T(0.001)SGDSSR 121.86 4.39E-13 416302000 12449.66 13806.8 12509.5 10101.9 11134.46 11139.9 12417.4 11291.52 11250.22 11053.3 TRUE FALSE 11390.75104 12907.97481 11660.38999 10879.95009 10690.95088 11770.63151 11589.0579 11192.79943 12419.72063 12422.66625 0.916932872 1.039066377 0.938638273 0.875814408 0.860600346 0.947512496 0.932896181 0.90099816 0.999762883 1 13.60068723 -9.842837393 8.650034279 1 0.933299771 0.129285276 0.050730294 0 0 0.051546539 0.012501872 1.44E-10 9.842837393 -0.066700228 QEKPAEKPAETPVAT(ph)SPTATDSTSGDSSR ddPTM_A459_MK2206_30min_R2 5 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 P54727;P54727-2;H0Y579 P54727 RAD23B UV excision repair protein RAD23 homolog B 1 QEKPAEKPAET(0.003)PVAT(0.504)S(0.383)PT(0.076)AT(0.026)DS(0.003)T(0.003)S(0.003)GDSSR;QEKPAEKPAET(0.001)PVAT(0.456)S(0.456)PT(0.071)AT(0.015)DSTSGDSSR;QEKPAEKPAET(0.016)PVAT(0.349)S(0.349)PT(0.15)AT(0.088)DS(0.039)T(0.006)S(0.003)GDSSR;QEKPAEKPAETPVAT(0.544)S(0.413)PT(0.037)AT(0.006)DSTSGDSSR;QEKPAEKPAET(0.004)PVAT(0.427)S(0.339)PT(0.084)AT(0.131)DS(0.007)T(0.008)S(0.001)GDSSR 112.39 1.38E-10 285895800 177342 178805.1 184490.7 185710.4 177187.1 150452 189399.4 158065.9 150713.2 191677.2 TRUE FALSE 190919.4399 169925.8987 190641.5279 170537.2663 170229.8442 156177.5563 164531.0313 178725.6559 163821.9617 185422.7887 1.029643882 0.916424027 1.02814508 0.919721181 0.918063229 0.842278112 0.887329074 0.963881825 0.883505004 1 17.50045904 -5.886067978 7.373170292 0.909860171 0.983622507 0.309179469 0.050507739 0.269363473 16.349962 0.01380215 0.020581848 1.30E-06 5.886067978 0.073762337 QEKPAEKPAETPVATS(ph)PTATDSTSGDSSR ddPTM_A459_MK2206_30min_R1 4 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 P54727;P54727-2;H0Y579 P54727 RAD23B UV excision repair protein RAD23 homolog B 1 QEKPAEKPAET(0.002)PVAT(0.216)S(0.673)PT(0.059)AT(0.031)DS(0.007)T(0.007)S(0.003)GDS(0.001)SR;QEKPAEKPAETPVAT(0.201)S(0.752)PT(0.032)AT(0.012)DS(0.001)T(0.001)S(0.001)GDSSR;QEKPAEKPAETPVAT(0.229)S(0.678)PT(0.082)AT(0.009)DS(0.001)T(0.001)S(0.001)GDSSR;QEKPAEKPAETPVAT(0.232)S(0.697)PT(0.048)AT(0.021)DS(0.001)T(0.001)SGDSSR 106.94 5.69E-11 426802100 11063.45 11154.04 11395.9 9579.66 9116.56 8036.01 9544.2 10217.16 9641.72 9806.58 TRUE FALSE 10122.44548 10427.90997 10622.37806 10317.48707 8753.428111 8491.001942 8907.523832 10127.83245 10644.0113 11021.49317 0.918427778 0.946143123 0.963787565 0.936124254 0.794214357 0.770403956 0.808195741 0.918916547 0.965750388 1 13.42803207 -6.090622171 10.53297991 0.863534243 0.944256126 0.155504317 0.070520601 0.888569984 99.2276372 0.022101559 0.028555578 8.12E-07 6.090622171 0.080721883 QEKPAEKPAETPVATS(ph)PTATDSTSGDSSR ddPTM_A459_MK2206_30min_R2 6 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 P54727;P54727-2;H0Y579 P54727 RAD23B UV excision repair protein RAD23 homolog B 1 QEKPAEKPAETPVAT(0.227)S(0.714)PT(0.05)AT(0.006)DS(0.001)T(0.001)SGDSSR;QEKPAEKPAETPVAT(0.215)S(0.762)PT(0.015)AT(0.008)DSTSGDSSR;QEKPAEKPAET(0.015)PVAT(0.223)S(0.651)PT(0.085)AT(0.022)DS(0.002)T(0.001)SGDSSR;QEKPAEKPAETPVAT(0.14)S(0.502)PT(0.098)AT(0.24)DS(0.004)T(0.012)S(0.004)GDSSR;QEKPAEKPAETPVAT(0.086)S(0.629)PT(0.125)AT(0.125)DS(0.01)T(0.01)S(0.009)GDS(0.003)S(0.003)R;QEKPAEKPAETPVAT(0.483)S(0.488)PT(0.017)AT(0.009)DS(0.002)T(0.001)SGDSSR 96.368 6.50E-08 1898082000 381945 427811 390905 389947 375261 305418 409705 304159 307636 395620 TRUE FALSE 411187.0029 406566.5278 403937.5776 358087.0827 360526.3676 317040.896 355910.2414 343913.6256 334393.6232 382710.9518 1.074406157 1.062333142 1.055463858 0.935659356 0.942033056 0.828408214 0.929971404 0.898624991 0.873749815 1 18.54589566 -5.817617065 2.235039263 0.903846802 1.071097921 0.717586134 0.042717392 0.14668587 1.49522734 0.012382936 0.022299373 1.52E-06 5.817617065 0.167251119 QEKPAEKPAETPVATSPT(ph)ATDSTSGDSSR ddPTM_A459_MK2206_30min_R1 1 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 P54727;P54727-2;H0Y579 P54727 RAD23B UV excision repair protein RAD23 homolog B 1 QEKPAEKPAETPVAT(0.023)S(0.209)PT(0.358)AT(0.358)DS(0.011)T(0.011)S(0.027)GDS(0.002)SR 101.9 6.89E-08 378280000 2963.5 3573.7 3488.8 2708.2 2947.3 2502.2 3049.6 3156.1 3562.9 3612.5 TRUE FALSE 2711.438763 3341.05148 3251.989976 2916.786033 2829.9028 2643.872402 2846.166748 3128.50655 3933.276205 4060.043773 0.66783486 0.822910212 0.800974117 0.71841246 0.697012879 0.651193078 0.701018735 0.770559808 0.968776798 1 11.98727957 -8.243896811 3.149182812 1.000077695 0.725966836 0.806677806 0.050610878 0.114928742 2.182502012 0.049975135 0.014671817 5.70E-09 8.243896811 -0.274110859 QEKPS(ph)SPSPMPSSTPSPSLNLGNTEEAIR ddPTM_A459_MK2206_30min_R2 1 QEKPSSPSPMPSSTPSPSLNLGNTEEAIR 29 1 O95810 O95810 SDPR Serum deprivation-response protein 1 QEKPS(0.36)S(0.36)PS(0.279)PMPS(0.001)STPSPSLNLGNTEEAIR 74.622 3.61E-05 37193000 60256 39149 46683 47555 37420 32451 54447 40944 33408 66525 TRUE FALSE 64869.24569 37204.91759 48239.38792 43669.60438 35950.70278 33685.94554 47298.0435 46295.52138 36313.76745 64354.2947 1.008001812 0.578126414 0.74959081 0.678581042 0.558637197 0.523445183 0.73496328 0.71938511 0.564278851 1 15.97374881 -10.34487093 6.504342917 1.000000007 0.673169357 0.338089959 0.134298894 1.34E-08 2.60E-09 0.12614156 0.030593822 4.52E-11 10.34487093 -0.32683065 QEKPSS(ph)PSPMPSSTPSPSLNLGNTEEAIR ddPTM_A459_MK2206_30min_R2 1 QEKPSSPSPMPSSTPSPSLNLGNTEEAIR 29 1 O95810 O95810 SDPR Serum deprivation-response protein 1 QEKPS(0.023)S(0.517)PS(0.394)PMPS(0.057)S(0.004)T(0.004)PSPSLNLGNTEEAIR 108.5 2.17E-10 25737000 38393 33306 33573 37191 30232 30342 36976 31120 28915 35246 TRUE FALSE 41332.3976 31652.07247 34692.30706 34152.37633 29044.93978 31496.68607 32121.00678 35187.49085 31429.97443 34095.92591 1.212238603 0.92832418 1.017491273 1.001655636 0.851859541 0.92376685 0.942077563 1.032014527 0.921810263 1 15.05731174 -4.757510212 24.99874888 0.957058269 1.212238971 0.679009974 0.052508191 69.83626634 444260.7959 0.013481763 0.099598654 1.75E-05 4.757510212 0.255180702 QEKPSSPS(ph)PMPSSTPSPSLNLGNTEEAIR ddPTM_A459_MK2206_30min_R1 3 QEKPSSPSPMPSSTPSPSLNLGNTEEAIR 29 1 O95810 O95810 SDPR Serum deprivation-response protein 1 QEKPS(0.007)S(0.121)PS(0.555)PMPS(0.3)S(0.016)T(0.001)PSPSLNLGNTEEAIR;QEKPS(0.078)S(0.199)PS(0.718)PMPS(0.004)S(0.001)T(0.001)PSPSLNLGNTEEAIR;QEKPS(0.003)S(0.038)PS(0.595)PMPS(0.359)S(0.006)TPSPSLNLGNTEEAIR 139.47 8.78E-14 33134700 2427.05 2551.23 2617.4 2003.92 2445.06 2298.4 2938.04 2239.32 2669.45 2835.89 TRUE FALSE 2220.616653 2385.144463 2439.73818 2158.262266 2347.668083 2428.533422 2742.048712 2219.741861 2946.94888 3187.221463 0.696724931 0.74834601 0.765474947 0.67716106 0.736587686 0.761959421 0.860325755 0.696450462 0.924613779 1 11.63808355 -8.597975019 0.596250883 1.008256602 0.725349941 0.707717551 0.054927193 0.525014484 0.428305851 0.056914519 0.024023222 2.52E-09 8.597975019 -0.28290666 QEKPSSPS(ph)PMPSSTPSPSLNLGNTEEAIR ddPTM_A459_MK2206_30min_R2 8 QEKPSSPSPMPSSTPSPSLNLGNTEEAIR 29 1 O95810 O95810 SDPR Serum deprivation-response protein 1 QEKPS(0.031)S(0.102)PS(0.858)PMPS(0.004)S(0.002)T(0.002)PSPSLNLGNTEEAIR;QEKPS(0.005)S(0.063)PS(0.894)PMPS(0.025)S(0.009)T(0.003)PSPSLNLGNTEEAIR;QEKPS(0.05)S(0.286)PS(0.656)PMPS(0.005)S(0.002)T(0.001)PSPSLNLGNTEEAIR;QEKPS(0.009)S(0.037)PS(0.454)PMPS(0.331)S(0.117)T(0.042)PS(0.009)PSLNLGNTEEAIR;QEKPS(0.012)S(0.212)PS(0.759)PMPS(0.012)S(0.004)T(0.001)PSPSLNLGNTEEAIR;QEKPSS(0.002)PS(0.992)PMPS(0.004)S(0.001)TPSPSLNLGNTEEAIR;QEKPS(0.036)S(0.412)PS(0.538)PMPS(0.006)S(0.003)T(0.003)PS(0.001)PSLNLGNTEEAIR;QEKPS(0.047)S(0.136)PS(0.732)PMPS(0.072)S(0.008)T(0.005)PSPSLNLGNTEEAIR 137.94 1.11E-13 124764200 319040 295344 282506 297550 272768 270487 339632 285017.1 252914 372038 TRUE FALSE 343465.9477 280677.6464 291924.609 273239.2132 262057.7578 280780.5723 295037.9104 322269.8136 274912.0026 359898.4305 0.954341332 0.779880162 0.811130542 0.759212017 0.728143653 0.780166148 0.819781042 0.895446566 0.763859965 1 18.45723029 -10.42908632 5.336273337 1.000000281 0.807342483 0.4379081 0.064430207 2.17E-07 4.46E-08 0.063063453 0.015295112 3.72E-11 10.42908632 -0.192657798 QEKPSSPSPMPS(ph)STPSPSLNLGNTEEAIR ddPTM_A459_MK2206_30min_R1 2 QEKPSSPSPMPSSTPSPSLNLGNTEEAIR 29 1 O95810 O95810 SDPR Serum deprivation-response protein 1 QEKPS(0.001)S(0.007)PS(0.157)PMPS(0.78)S(0.052)T(0.004)PSPSLNLGNTEEAIR;QEKPS(0.004)S(0.012)PS(0.044)PMPS(0.904)S(0.026)T(0.01)PSPSLNLGNTEEAIR 151.28 4.67E-16 55624900 3026.88 3425.18 3490.05 2382.89 2577.99 2857.12 3758.81 2815.07 3148.81 3672.3 TRUE FALSE 2769.427961 3202.200159 3253.15513 2566.420601 2475.303199 3018.887665 3508.066643 2790.45814 3476.140068 4127.252248 0.671010104 0.775867324 0.788213304 0.621823055 0.599746042 0.731452183 0.849976312 0.676105547 0.842240759 1 12.0109659 -8.853484824 0.730428146 1.003617844 0.704835826 0.593033115 0.073809333 0.920278669 0.936748515 0.081503473 0.028953582 1.40E-09 8.853484824 -0.298782019 QEKPSSPSPMPS(ph)STPSPSLNLGNTEEAIR ddPTM_A459_MK2206_30min_R2 1 QEKPSSPSPMPSSTPSPSLNLGNTEEAIR 29 1 O95810 O95810 SDPR Serum deprivation-response protein 1 QEKPSSPS(0.001)PMPS(0.442)S(0.419)T(0.131)PS(0.008)PSLNLGNTEEAIR 154.34 9.84E-17 35173000 94575 79999 82847 97191 100800 75401 105860 89091 81016 101200 TRUE FALSE 101815.7347 76026.36599 85609.07763 89250.1844 96842.08552 78270.43789 91960.45484 100735.4996 88062.62524 97897.85229 1.040020106 0.776588702 0.874473501 0.911666419 0.989215629 0.799511287 0.939351096 1.028985797 0.899535824 1 16.57898959 -7.519007284 24.82169215 0.975390187 0.894384731 0.161488828 0.079376676 263.7806512 1691257.358 0.035131506 0.020870639 3.03E-08 7.519007284 -0.081005456 QEKPSSPSPMPSS(ph)TPSPSLNLGNTEEAIR ddPTM_A459_MK2206_30min_R1 1 QEKPSSPSPMPSSTPSPSLNLGNTEEAIR 29 1 O95810 O95810 SDPR Serum deprivation-response protein 1 QEKPS(0.004)S(0.014)PS(0.162)PMPS(0.263)S(0.434)T(0.123)PSPSLNLGNTEEAIR 148.84 7.62E-16 35073000 2752.1 2411.7 2694.5 2235.6 2752.6 2456.6 2714.5 2307.1 2613 3035.9 TRUE FALSE 2518.019443 2254.697892 2511.604847 2407.786299 2642.958113 2595.690569 2533.420658 2286.929268 2884.630701 3412.010212 0.737987077 0.660812176 0.736107072 0.705679687 0.774604397 0.760751114 0.742500901 0.670258623 0.845434369 1 11.73640625 -8.547987366 3.909346763 0.999717305 0.725506963 0.861659198 0.034732378 0.070245763 3.338462781 0.034554514 0.009064608 2.83E-09 8.547987366 -0.274210342 QELAVFCS(ph)PEPPAK ddPTM_A459_MK2206_30min_R1 2 QELAVFCSPEPPAK 14 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 QELAVFCS(1)PEPPAK;QELAVFCS(1)PEPPAK 128.1 0.0011618 12861900 8776.9 9778.3 9620.4 7912.9 8150.9 7785.1 8561.2 8672 7851.6 7869.1 TRUE FALSE 8030.378566 9141.730893 8967.394052 8522.352929 7826.232393 8225.885634 7990.097969 8596.181618 8667.801917 8843.983517 0.908004696 1.033666659 1.01395418 0.963632837 0.884921639 0.930110919 0.90345012 0.971980737 0.980078932 1 13.11048062 -2.267515663 17.52965925 0.957531094 0.267833493 0 0.047895553 0 0 0.01169892 0 0.005401126 2.267515663 -0.689697601 QELAVFCS(ph)PEPPAK ddPTM_A459_MK2206_30min_R2 1 QELAVFCSPEPPAK 14 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 QELAVFCS(1)PEPPAK 96.096 0.012037 4693900 44550 48055 49663 48313 54451 47588 58723 41869 42120 56384 TRUE FALSE 47960.78225 45668.65858 51318.73963 44365.67335 52312.98015 49398.99469 51012.59956 47341.42206 45783.52146 54544.1947 0.879301317 0.837278079 0.940865291 0.813389465 0.959093455 0.905669154 0.935252594 0.867946118 0.839383948 1 15.73513803 -6.269975587 24.99713983 0.91154518 0.870760415 0.174935328 0.052143955 1375.812057 4028875.837 0.015765918 0.018152431 5.37E-07 6.269975587 -0.040784765 QELGS(ph)PEER ddPTM_A459_MK2206_30min_R2 1 QELGSPEER 9 0 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF0 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 QELGS(1)PEER 120.03 0.0067078 47031000 124690 143830 136060 162070 164660 147220 168600 119490 125090 145050 TRUE FALSE 134236.3623 136687.6113 140596.1725 148828.3626 158194.621 152822.5603 146462.6175 135107.7533 135970.1021 140317.0304 0.956664789 0.974134152 1.001989367 1.06065787 1.127408559 1.089123393 1.04379787 0.962874948 0.969020665 1 17.09833059 -5.462286263 3.026443882 1.040649599 0.965295691 0.250703877 0.048362529 0.394167727 7.042672119 0.015455678 0.035370951 3.45E-06 5.462286263 -0.075353908 QELSHALYQHDAACR ddPTM_A459_MK2206_30min_R2 2 QELSHALYQHDAACR 15 0 F5H2I0;F5GY56;Q9UMS4 F5H2I0 PRPF19 Pre-mRNA-processing factor 19 0 ; 124.78 0.00072568 9681300 22476.7 30429 28683 32618 33899 36461 29187 24367 33223 25040 FALSE TRUE 24197.53343 28917.94011 29639.2769 29953.00506 32567.95493 37848.5489 25354.71184 27551.85056 36112.67649 24222.94685 0.998950854 1.193824198 1.223603267 1.236554959 1.344508376 1.562508028 1.046722845 1.137427693 1.490845714 1 14.56408677 -4.350348716 1.230940681 1.270177512 0.557658667 0.172470149 0.168015822 6.5035914 4.146831735 0.049819802 7.629802083 4.46E-05 4.350348716 -0.712518845 QEMQEVQS(ph)SR ddPTM_A459_MK2206_30min_R1 1 QEMQEVQSSR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 QEMQEVQS(0.805)S(0.195)R 92.906 0.025967 5141400 5435.3 5666 6168.5 4657.9 6016.8 5425.6 4781.8 4942.3 4043.6 4072.3 TRUE FALSE 4972.999193 5297.14237 5749.799406 5016.652265 5777.138115 5732.792783 4462.814847 4899.089992 4463.94669 4576.807268 1.086565132 1.157388122 1.256290481 1.096103019 1.262263796 1.252574655 0.975093463 1.070416495 0.975340762 1 12.16012583 -7.267437217 24.96872746 1.011080714 1.18661823 0.658731182 0.063404024 317.1309716 1320196.084 0.026301361 0.018256908 5.40E-08 7.267437217 0.175537516 QEMQEVQSS(ph)R ddPTM_A459_MK2206_30min_R2 1 QEMQEVQSSR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 QEMQEVQS(0.236)S(0.764)R 103.11 0.014573 13965000 74081 68368 57854 86105 74690 69757 95680 72649 53456 69355 TRUE FALSE 79752.69832 64972.94454 59782.82348 79069.94606 71757.29531 72411.65152 83117.10107 82144.47374 58105.50625 67091.95203 1.188707377 0.968416368 0.891058043 1.178531011 1.069536556 1.079289681 1.238853522 1.224356592 0.866057768 1 16.0338521 -5.781119015 24.94838372 1.107579636 1.011296057 0.067588917 0.124831188 522.5337783 662427.7285 0.035138553 0.052202759 1.66E-06 5.781119015 -0.09628358 QEMQEVQSSR ddPTM_A459_MK2206_30min_R1 2 QEMQEVQSSR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 215.72 0.0024904 21329000 4828.6 4389.4 4723.1 4051.7 5198.9 5094.3 4960.6 4658.6 4389.5 3922.9 FALSE TRUE 4417.902214 4103.649262 4402.509131 4363.762636 4991.816804 5382.734864 4629.687425 4617.870351 4845.804233 4408.898468 1.002042176 0.930765199 0.998550809 0.98976256 1.132214053 1.220879751 1.050078032 1.047397754 1.099096354 1 12.10620254 -6.192672569 6.068017222 1.098229359 0.976760057 0.463849939 0.058386845 0.20792375 14.32764019 0.018142311 0.023471062 6.42E-07 6.192672569 -0.121469303 QEMQEVQSSR ddPTM_A459_MK2206_30min_R2 4 QEMQEVQSSR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;; 178.54 0.0013439 85809000 102585 125373 128944 131559 109585 115045 128533 89475 103431 117206 FALSE TRUE 110438.9865 119147.1591 133242.9286 120810.2089 105282.1423 119423.1181 111656.4627 101169.6897 112427.2414 113381.5778 0.974047007 1.05085113 1.175172644 1.065518854 0.928564801 1.053285026 0.984784873 0.892293895 0.991582968 1 16.79082673 -6.190323472 7.87275919 0.974178242 1.073545897 0.349334169 0.060758071 0.357964859 36.02226987 0.018758661 0.02425031 6.45E-07 6.190323472 0.099367655 QEMT(ph)S(ph)MSAELK ddPTM_A459_MK2206_30min_R1 1 QEMTSMSAELK 11 0 Q96CN5;J3KTD4 Q96CN5 LRRC45 Leucine-rich repeat-containing protein 45 2 QEMT(0.754)S(0.754)MS(0.493)AELK 69.825 0.045566 0 741.22 665.5 614.66 557.17 732.74 710.59 843.58 576.95 599.98 448.13 TRUE FALSE 678.1753467 622.175829 572.9385917 600.0833299 703.5534142 750.8229917 787.3063174 571.905787 662.350068 503.6477276 1.346527165 1.235339296 1.137578034 1.191474312 1.396915693 1.490770137 1.563208319 1.135527385 1.31510584 1 8.976271195 -9.048664958 1.332474299 1.00057285 1.317382041 0.321127681 0.136219204 3.529731129 7.609066746 0.145314238 0.042918759 8.94E-10 9.048664958 0.316809191 QENCGAQQVPAGPGTST(ph)PPS(ph)SPVR ddPTM_A459_MK2206_30min_R2 1 QENCGAQQVPAGPGTSTPPSSPVR 24 0 Q96G46-2;Q96G46 Q96G46-2 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 2 QENCGAQQVPAGPGT(0.103)S(0.411)T(0.488)PPS(0.543)S(0.455)PVR 106.37 1.88E-06 5934400 50526 59981 56047 51974 55742 58464 56676 48558 55494 62812 TRUE FALSE 54394.30941 57002.43076 57915.57901 47727.55794 53553.289 60688.88849 49234.37312 54904.69732 60320.76781 60762.44958 0.895196125 0.938119367 0.953147534 0.785477845 0.881355004 0.998789366 0.810276305 0.903595851 0.992731008 1 15.89089241 -8.257306601 5.209200041 0.998491868 0.895174786 0.314921161 0.059494645 0.206901032 18.94692103 0.049377688 0.015374159 5.53E-09 8.257306601 -0.103317082 QENCGAQQVPAGPGTST(ph)PPSS(ph)PVR ddPTM_A459_MK2206_30min_R2 1 QENCGAQQVPAGPGTSTPPSSPVR 24 0 Q96G46-2;Q96G46 Q96G46-2 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like 2 QENCGAQQVPAGPGT(0.132)S(0.541)T(0.524)PPS(0.247)S(0.557)PVR 105.69 1.99E-06 6275000 32475 41084 37686 35538 36926 38138 38618 30864 36124 39625 TRUE FALSE 34961.31097 39043.8283 38942.43243 32634.43172 35476.0997 39589.36831 33547.41021 34898.03077 39266.00022 38332.0395 0.912064983 1.01856903 1.015923831 0.851361737 0.925494708 1.032800989 0.875179371 0.91041414 1.024365015 1 15.22626314 -8.273497748 24.69452388 1.012182521 0.944825201 0.181084728 0.058946346 1338.482365 2741065.112 0.056777931 0.015126605 5.33E-09 8.273497748 -0.06735732 QENEDS(ph)SDATTPVPR ddPTM_A459_MK2206_30min_R2 2 QENEDSSDATTPVPR 15 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 QENEDS(0.396)S(0.243)DAT(0.358)T(0.003)PVPR;QENEDS(0.502)S(0.281)DAT(0.216)T(0.002)PVPR 170.79 5.02E-05 8452000 19543.4 24740 19756.1 28958 19242.9 22954.1 26209 19485.6 17266.3 19921 TRUE FALSE 21039.65773 23511.44758 20414.75851 26592.03877 18487.32706 23827.63436 22767.72682 22032.43482 18768.09156 19270.9794 1.091779369 1.220044248 1.059352412 1.379900742 0.959335106 1.236451654 1.181451464 1.14329606 0.973904396 1 14.23414227 -8.22382433 5.152250908 0.98564306 1.162642047 0.293893119 0.106708957 0.211362261 14.58730167 0.074643982 0.025320653 5.97E-09 8.22382433 0.176998987 QENGAS(ph)VILR ddPTM_A459_MK2206_30min_R2 2 QENGASVILR 10 0 P29692;E9PI39;E9PQ49;E9PK01;P29692-2;E9PRY8;A0A087X1X7;E9PL12;E9PPR1;E9PMW7;P29692-4;E9PIZ1;H0YCK7;E9PK06;E9PK72 P29692 EEF1D Elongation factor 1-delta 1 QENGAS(1)VILR;QENGAS(1)VILR 89.629 0.030573 4362300 13217.3 20528.3 14121.9 17217.3 16099.6 18181.8 16676.5 17501.8 18541.6 14883.7 TRUE FALSE 14229.22665 19508.89447 14592.7171 15810.59151 15467.44881 18873.72114 14486.85552 19789.34535 20154.31485 14398.04609 0.988274837 1.354968192 1.013520655 1.098106744 1.074274156 1.310852947 1.006168158 1.37444659 1.399795134 1 13.81358542 -7.770343941 24.99954363 1.290340632 1.130393063 0.129802338 0.15486508 330.0877249 926704.6253 0.078223536 0.038442312 1.70E-08 7.770343941 -0.159947569 QENGDLS(ph)PFSGTSLR ddPTM_A459_MK2206_30min_R1 1 QENGDLSPFSGTSLR 15 0 P19174-2 P19174-2 PLCG1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1" 1 QENGDLS(0.961)PFS(0.039)GTSLR 144.4 0.00037347 3571200 1114.5 1070.4 1064.6 967.96 1334.1 1172.7 1216.4 1017.7 1545.4 1238.1 TRUE FALSE 1019.705923 1000.716765 992.3379181 1042.512447 1280.959972 1239.097261 1135.256175 1008.802356 1706.04986 1391.485175 0.732818388 0.719171705 0.713150191 0.749208447 0.920570334 0.89048542 0.815859339 0.724982468 1.226063986 1 10.44240982 -7.196245303 0.378663364 1.045309699 0.682112411 0.455304766 0.116006943 1.352606272 0.461675167 0.13470588 0.175857787 6.36E-08 7.196245303 -0.363197288 QENGDLS(ph)PFSGTSLR ddPTM_A459_MK2206_30min_R2 3 QENGDLSPFSGTSLR 15 0 P19174-2 P19174-2 PLCG1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1" 1 QENGDLS(0.728)PFS(0.271)GTSLR;QENGDLS(0.995)PFS(0.004)GT(0.001)SLR;QENGDLS(0.61)PFS(0.026)GT(0.015)S(0.349)LR 182.28 2.06E-05 13382300 40199 47780 38336.8 43605 42788 49997 47004 36488.6 37049.3 41318.5 TRUE FALSE 43276.66635 45407.31468 39614.92978 40042.33201 41107.92813 51899.67087 40832.31834 41257.7853 40271.78114 39970.28073 1.082721101 1.136026914 0.991109621 1.001802621 1.028462332 1.298456501 1.021566964 1.032211547 1.007543115 1 15.28664009 -7.475404679 24.99892003 1.017303225 1.087215062 0.163936588 0.082235079 858.5618334 452103.1726 0.036513004 0.024616453 3.35E-08 7.475404679 0.069911837 QENGDLSPFS(ph)GTSLR ddPTM_A459_MK2206_30min_R1 1 QENGDLSPFSGTSLR 15 0 P19174-2 P19174-2 PLCG1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1" 1 QENGDLS(0.201)PFS(0.798)GT(0.001)SLR 174.4 2.58E-05 4961500 1062.8 1170 1138.2 579.15 1125.5 1032.6 1181.1 948.48 898.88 1095.7 TRUE FALSE 972.403279 1093.832787 1060.942155 623.7562333 1080.668952 1091.06492 1102.310974 940.1875394 992.3217927 1231.443588 0.789645006 0.888252453 0.861543448 0.506524407 0.877562693 0.886004792 0.895137207 0.763484051 0.805819935 1 10.26613482 QEPCAQHNGSEPAS(ph)PK ddPTM_A459_MK2206_30min_R2 1 QEPCAQHNGSEPASPK 16 0 Q8N6T7-2;Q8N6T7;M0QZ09 Q8N6T7-2 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 QEPCAQHNGS(0.002)EPAS(0.998)PK 119.18 0.0011271 4663100 43266 31975 36117 32228 29334 23099 38764 30914 23754 43142 TRUE FALSE 46578.47823 30387.168 37321.12275 29594.86931 28182.19977 23978.04863 33674.24024 34954.56594 25820.07998 41734.28007 1.116072402 0.728110511 0.894255818 0.709126149 0.675277008 0.574540847 0.806872436 0.837550471 0.618677977 1 15.34894526 -2.687700974 1.488693423 0.744417535 199.9999999 0.407719486 0.1247552 700.5723293 3.804460462 0.03387616 474555.4949 0.002052575 2.687700974 199.2555824 QEPCAQHNGSEPAS(ph)PKR ddPTM_A459_MK2206_30min_R1 1 QEPCAQHNGSEPASPKR 17 1 Q8N6T7-2;Q8N6T7;M0QZ09 Q8N6T7-2 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 QEPCAQHNGSEPAS(1)PKR 131.33 0.00040675 22727000 2014.4 1672.4 2016.8 1496.8 1774.9 1489.7 1413.2 1756.5 1550.2 1388.1 TRUE FALSE 1843.064702 1563.526456 1879.905235 1612.083795 1704.201975 1574.045527 1318.928007 1741.143106 1711.348837 1560.068308 1.181400002 1.002216665 1.205014695 1.033341801 1.092389331 1.008959363 0.845429652 1.116068506 1.096970453 1 10.60739348 -6.410257254 1.849083754 1.013244827 1.110375678 0.200052905 0.088354886 0.620996641 4.216711022 0.032908735 0.038828418 3.89E-07 6.410257254 0.097130851 QEPCAQHNGSEPAS(ph)PKR ddPTM_A459_MK2206_30min_R2 3 QEPCAQHNGSEPASPKR 17 1 Q8N6T7-2;Q8N6T7;M0QZ09 Q8N6T7-2 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 QEPCAQHNGS(0.017)EPAS(0.983)PKR;QEPCAQHNGSEPAS(1)PKR;QEPCAQHNGSEPAS(1)PKR 119.16 0.00077846 28343100 18012.7 20689.7 20677.8 20207.8 19166.7 18060 20648.8 16124 21216.8 21110 TRUE FALSE 19391.76616 19662.27958 21367.18753 18556.7581 18414.11905 18747.28596 17937.58776 18231.46216 23062.19891 20421.18243 0.949590761 0.962837468 1.046324698 0.908701451 0.901716593 0.918031364 0.878381446 0.892772112 1.129327305 1 14.31777878 -8.254907121 24.93707586 1.064663655 0.933035355 0.493523709 0.053633766 398.3136423 1520587.634 0.040305591 0.014443567 5.56E-09 8.254907121 -0.1316283 QEPES(ph)EEEEEEKQEK ddPTM_A459_MK2206_30min_R1 2 QEPESEEEEEEKQEK 15 1 P49756 P49756 RBM25 RNA-binding protein 25 1 QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK 115.2 0.0013209 166901000 12424.6 16610.6 16173.8 12913.9 8656.6 8114 10789.5 11075.1 16847.8 17927.8 TRUE FALSE 11367.82253 15529.24692 15075.96752 13908.53082 8311.789291 8573.407668 10069.75214 10978.27157 18599.1891 20148.83121 0.564192652 0.770726935 0.748230374 0.690289708 0.412519674 0.42550397 0.499768549 0.544858977 0.923090223 1 14.29840853 -8.327008889 4.596150081 0.986925879 0.583637607 0.626267511 0.117605848 0.166076427 6.67921829 0.129098697 0.034525775 4.71E-09 8.327008889 -0.403288272 QEPES(ph)EEEEEEKQEK ddPTM_A459_MK2206_30min_R2 5 QEPESEEEEEEKQEK 15 1 P49756 P49756 RBM25 RNA-binding protein 25 1 QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK 105.5 0.0025934 543020000 422894 315992 337734 260464 273577 171958.5 373870 298575 219769.2 407681 TRUE FALSE 455271.0898 300300.2968 348993.883 239183.258 262834.9924 178502.5012 324780.4199 337599.7777 238884.3278 394378.4024 1.154401679 0.761452186 0.884921387 0.606481634 0.666453819 0.452617334 0.823524863 0.856030086 0.605723656 1 18.58922102 QEPES(ph)EEEEEEKQEKEEK ddPTM_A459_MK2206_30min_R1 2 QEPESEEEEEEKQEKEEK 18 2 P49756 P49756 RBM25 RNA-binding protein 25 1 QEPES(1)EEEEEEKQEKEEK;QEPES(1)EEEEEEKQEKEEK 87.138 0.007904 37631000 1691.64 2328.57 2081.4 2209.32 1344.86 1103.03 1400.17 1459.78 1624.57 1401.49 TRUE FALSE 1547.757135 2176.97967 1940.120367 2379.482209 1291.291378 1165.482605 1306.767214 1447.017297 1793.449865 1575.117162 0.982629846 1.382106501 1.231730829 1.510669979 0.819806558 0.739933913 0.829631754 0.918672802 1.138613627 1 10.62124343 -6.276401598 24.96798887 0.891410706 1.281089206 0.555684681 0.161232527 572.9247156 956057.7158 0.050433744 0.057410845 5.29E-07 6.276401598 0.3896785 QEPES(ph)EEEEEEKQEKEEK ddPTM_A459_MK2206_30min_R2 2 QEPESEEEEEEKQEKEEK 18 2 P49756 P49756 RBM25 RNA-binding protein 25 1 QEPES(1)EEEEEEKQEKEEK;QEPES(1)EEEEEEKQEKEEK 81.016 0.012187 50828000 102786 153980 152118 123162 132918 69778 174078 95408 102380 148612 TRUE FALSE 110655.3752 146333.5771 157189.5382 113099.2706 127698.9715 72433.45069 151221.3495 107878.1532 111284.8273 143762.8026 0.769707972 1.017882056 1.09339506 0.786707469 0.888261561 0.503840002 1.051880923 0.750389887 0.774086379 1 17.13333091 -5.789273273 24.99862227 0.810827914 0.96608383 0.131935874 0.160365022 367.0978114 329702.3369 0.043831684 0.065028489 1.62E-06 5.789273273 0.155255916 QEPGGSHGS(ph)ETEDTGR ddPTM_A459_MK2206_30min_R1 2 QEPGGSHGSETEDTGR 16 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 QEPGGS(0.011)HGS(0.864)ET(0.12)EDT(0.005)GR;QEPGGS(0.102)HGS(0.897)ET(0.001)EDTGR 189.84 9.82E-07 26889000 1888.55 1633.81 1683.23 1220.9 1643.13 1589.36 1592.01 1757.81 1297.23 1418.23 TRUE FALSE 1727.918905 1527.448672 1568.977037 1314.93393 1577.680653 1679.34819 1485.809918 1742.441652 1432.081701 1593.931039 1.084061269 0.958290311 0.984344365 0.824962873 0.989804837 1.053588987 0.932167002 1.093172546 0.898459008 1 10.6383735 -6.502648959 24.96767627 1.000049793 0.957023687 0.034658232 0.077970306 2376.998771 2933704.258 0.023893093 0.026745986 3.14E-07 6.502648959 -0.043026106 QEPGGSHGS(ph)ETEDTGR ddPTM_A459_MK2206_30min_R2 2 QEPGGSHGSETEDTGR 16 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 QEPGGS(0.003)HGS(0.515)ET(0.241)EDT(0.241)GR;QEPGGS(0.151)HGS(0.843)ET(0.004)EDT(0.002)GR 181.34 9.72E-07 40649000 18272.9 21519.8 17960.1 22066.2 22773 22630 25816.9 15236.9 19374.3 21327.3 TRUE FALSE 19671.88727 20451.15802 18558.88077 20263.32087 21878.81759 23491.20051 22427.11002 17228.41515 21059.44159 20631.39195 0.953492974 0.991264093 0.899545742 0.982159659 1.060462505 1.138614426 1.087038144 0.835058303 1.020747492 1 14.33255354 -6.005126587 23.67675652 1.02404981 0.950489821 0.164769832 0.076806519 235.034403 1085514.708 0.023978104 0.034393877 9.88E-07 6.005126587 -0.073559989 QEPIES(ph)DEEEAEPPR ddPTM_A459_MK2206_30min_R2 2 QEPIESDEEEAEPPR 15 0 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 QEPIES(1)DEEEAEPPR;QEPIES(1)DEEEAEPPR 198.67 2.13E-05 6252200 9360.5 5683.5 7973.1 6043.7 5006.7 6119.8 8009.3 7181.6 4653.6 7907.9 TRUE FALSE 10077.14708 5401.265655 8238.919175 5549.910377 4810.111801 6352.693277 6957.669289 8120.259778 5058.361716 7649.865871 1.317297224 0.706060178 1.077001782 0.725491201 0.628783809 0.830431982 0.9095152 1.061490478 0.661235347 1 12.90121874 -4.750930213 24.99836608 0.844773264 1.317298211 0.452784609 0.155947487 420.4000985 999948.0113 0.038461582 0.537932908 1.77E-05 4.750930213 0.472524947 QEPIES(ph)DEEEAEPPREVEPGQR ddPTM_A459_MK2206_30min_R1 1 QEPIESDEEEAEPPREVEPGQR 22 1 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 QEPIES(1)DEEEAEPPREVEPGQR 123.85 1.77E-05 20163000 1486.6 1755.5 1726.6 1233.6 1958.7 1536.5 1770 1636.7 1450.6 1380.5 TRUE FALSE 1360.156864 1641.216631 1609.403203 1328.612086 1880.680831 1623.495302 1651.92653 1622.390504 1601.395061 1551.526762 0.876657043 1.057807491 1.037302895 0.8563256 1.212148496 1.046385626 1.064710303 1.045673555 1.032141436 1 10.59947287 -4.757924459 24.94155363 1.041251027 0.876656804 0.264235406 0.081285891 135.2022287 959230.7192 0.019908394 0.141995595 1.75E-05 4.757924459 -0.164594223 QEPLEEDS(ph)PSSSSAGLDK ddPTM_A459_MK2206_30min_R1 2 QEPLEEDSPSSSSAGLDK 18 0 P15408;P15408-3;P15408-2;C9JCN8 P15408 FOSL2 Fos-related antigen 2 1 QEPLEEDS(0.996)PS(0.004)SSSAGLDK;QEPLEEDS(0.992)PS(0.007)SSSAGLDK 366.99 4.85E-207 38961000 4931.2 4591.3 4728.4 4117.6 4044 3469.75 4535.1 4177.01 3227.36 3103 TRUE FALSE 4511.775545 4292.405535 4407.449382 4434.738265 3882.918917 3666.204247 4232.571754 4140.490842 3562.855621 3487.423066 1.29372762 1.230824438 1.263812649 1.271637591 1.11340633 1.051264552 1.213667419 1.187263708 1.021629884 1 11.76794568 -1.522878748 0.096397066 0.886694619 2.068979328 0.641691935 0.062287788 96.8803529 0.667945838 0.980870481 15.13527836 0.03 1.522878748 1.182284709 QEPLEEDS(ph)PSSSSAGLDK ddPTM_A459_MK2206_30min_R2 1 QEPLEEDSPSSSSAGLDK 18 0 P15408;P15408-3;P15408-2;C9JCN8 P15408 FOSL2 Fos-related antigen 2 1 QEPLEEDS(0.901)PS(0.072)S(0.021)S(0.006)SAGLDK 153.68 6.36E-05 38958000 160740 197230 165640 194370 180150 159640 182630 143840 165970 190050 TRUE FALSE 173046.378 187435.845 171162.3549 178489.3492 173076.4058 165715.2121 158650.4616 162640.3819 180405.7706 183848.6841 0.941243495 1.019511486 0.930995812 0.970849208 0.941406824 0.901367409 0.862940425 0.884642622 0.981273113 1 17.48815932 -6.50587806 3.722086241 0.915049802 0.966648136 0.123658204 0.044934051 0.359916225 10.82214993 0.014806613 0.015911782 3.12E-07 6.50587806 0.051598333 QEPLGS(ph)DSEGVNCLAYDEAIMAQQDR ddPTM_A459_MK2206_30min_R1 1 QEPLGSDSEGVNCLAYDEAIMAQQDR 26 0 J3KR44;F5H6Q1;F5GYJ8;Q96FW1;F5H3F0 J3KR44 OTUB1 Ubiquitin thioesterase OTUB1 1 QEPLGS(0.743)DS(0.257)EGVNCLAYDEAIMAQQDR 189.61 8.69E-28 14591000 1531 1474.3 1424.1 1094.7 1554.4 1469.9 1302.4 1525.3 1309.9 1212.7 TRUE FALSE 1400.78041 1378.322802 1327.43606 1179.013984 1492.484957 1553.124468 1215.519272 1511.964463 1446.068793 1362.938431 1.027764995 1.011287649 0.973951595 0.865053003 1.095049433 1.13954118 0.891837257 1.109341719 1.060993482 1 10.41250468 -6.301232756 24.99615679 1.051550464 0.972814894 0.210288298 0.075725087 882.5420446 554365.3415 0.023920213 0.027123276 5.00E-07 6.301232756 -0.078735571 QEPLGS(ph)DSEGVNCLAYDEAIMAQQDR ddPTM_A459_MK2206_30min_R2 2 QEPLGSDSEGVNCLAYDEAIMAQQDR 26 0 J3KR44;F5H6Q1;F5GYJ8;Q96FW1;F5H3F0 J3KR44 OTUB1 Ubiquitin thioesterase OTUB1 1 QEPLGS(0.957)DS(0.043)EGVNCLAYDEAIMAQQDR;QEPLGS(0.827)DS(0.173)EGVNCLAYDEAIMAQQDR 166.65 3.48E-17 5480600 17826.7 20965.9 18690.5 22844.5 23155.3 24641.6 21042.2 16337.1 19677 19211.1 TRUE FALSE 19191.52586 19924.76389 19313.63194 20978.03127 22246.10658 25579.35336 18279.33386 18472.41506 21388.46989 18584.24338 1.032677278 1.072132101 1.039247687 1.12880739 1.197041285 1.376400041 0.983593116 0.993982627 1.150892692 1 14.18179233 QEPQS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 QEPQSPSR 8 0 Q8WUQ7-2;Q8WUQ7;K7ENY9 Q8WUQ7-2 CACTIN Cactin 1 QEPQS(0.916)PS(0.084)R;QEPQS(0.997)PS(0.003)R 86.189 0.034221 41284000 143790 157533 138249 164967 153675 152020 161626 158922 175012 179771 TRUE FALSE 154798.673 149710.1403 142858.1527 151488.6684 147640.9473 157805.2276 140404.3121 179693.6511 190234.2274 173905.087 0.890133093 0.860872691 0.82147196 0.871099696 0.848974288 0.907421573 0.807361731 1.033285766 1.093896853 1 17.40794061 -7.803417926 8.25455154 1.048992249 0.858970664 0.852820851 0.035040014 0.085160913 14.71648249 0.017992885 0.008690137 1.57E-08 7.803417926 -0.190021585 QEPQSPS(ph)R ddPTM_A459_MK2206_30min_R1 2 QEPQSPSR 8 0 Q8WUQ7-2;Q8WUQ7;K7ENY9 Q8WUQ7-2 CACTIN Cactin 1 QEPQS(0.422)PS(0.578)R;QEPQS(0.487)PS(0.513)R 91.701 0.026497 4225500 3701 3564 2946.3 2515.6 2129.48 1984.58 3755 3271.5 527.47 2598.9 TRUE FALSE 3386.210515 3331.982952 2746.313365 2709.351948 2044.658302 2096.945205 3504.510801 3242.89762 582.3023941 2920.871353 1.159315186 1.140749643 0.940237701 0.927583457 0.700016555 0.717917687 1.199816896 1.110250069 0.199359138 1 11.5121831 -5.392750088 1.804519109 0.843004632 1.174263936 0.186214826 0.260645791 0.724201944 4.349200997 0.077154038 0.264351121 4.05E-06 5.392750088 0.331259304 QEPS(ph)PKPNNK ddPTM_A459_MK2206_30min_R1 2 QEPSPKPNNK 10 1 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 QEPS(1)PKPNNK;QEPS(1)PKPNNK 124.21 0.018578 11987400 4912.8 5342.4 4554.4 4892.6 1856.28 2217.04 4562.9 5280.9 431.64 3056 TRUE FALSE 4494.940562 4994.608789 4245.260017 5269.4289 1782.340437 2342.566889 4258.517266 5234.729648 476.5105226 3434.600352 1.308723025 1.454203773 1.236027363 1.534218937 0.518936777 0.682049336 1.239887274 1.524116087 0.138738273 1 11.74592652 -6.245154417 24.7773968 0.887861778 1.377839331 0.334814883 0.365532612 976.2793157 1485398.234 0.109451118 0.140859675 5.69E-07 6.245154417 0.489977553 QEPS(ph)PKPNNK ddPTM_A459_MK2206_30min_R2 3 QEPSPKPNNK 10 1 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK 130.56 0.01309 92565600 266268 215276 222099 200287 230572 115645.8 250571 251892 177418 302772 TRUE FALSE 286653.6828 204585.7069 229503.6698 183922.9114 221518.5847 120046.782 217670.7267 284815.1493 192849.4969 292892.5744 0.978699045 0.698500832 0.783576266 0.62795348 0.75631342 0.409866253 0.743175982 0.972421885 0.658430817 1 18.16001209 -12.54548008 17.40355559 0.996034689 0.746628389 0 0.175526372 0 0 0 0.039540917 2.85E-13 12.54548008 -0.2494063 QEQDEDGTEEDNSR ddPTM_A459_MK2206_30min_R2 2 QEQDEDGTEEDNSR 14 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 0 ; 260.19 1.20E-34 3146400 2280.5 2706.03 1705.97 5100.2 2216.48 5067.4 3787.57 1775.56 2029.63 2192.92 FALSE TRUE 2455.096833 2571.652485 1762.846188 4683.497345 2129.449858 5260.243458 3290.257509 2007.631788 2206.163549 2121.3652 1.157319274 1.212262973 0.830996091 2.207775137 1.003811064 2.479650113 1.551009468 0.946386689 1.03997348 1 11.05077729 QEQINTEPLEDTVLS(ph)PTK ddPTM_A459_MK2206_30min_R1 3 QEQINTEPLEDTVLSPTK 18 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDTVLS(0.762)PT(0.238)K;QEQINTEPLEDT(0.001)VLS(0.899)PT(0.1)K;QEQINTEPLEDT(0.004)VLS(0.891)PT(0.105)K 258.81 7.43E-52 96735000 32702.3 32732.5 31066.3 28380.9 25024 22793 25219.6 25778 26002.3 24255.6 TRUE FALSE 29920.79766 30601.6083 28957.60611 30566.80184 24027.24109 24083.51996 23537.2465 25552.62566 28705.33214 27260.56685 1.097585308 1.1225595 1.06225253 1.121282694 0.881391837 0.883456316 0.863417354 0.937347554 1.052998358 1 14.73452794 -6.256569838 24.98310719 0.927002773 1.099703731 0.66993371 0.056325286 247.9440986 1272071.286 0.017601432 0.021985739 5.54E-07 6.256569838 0.172700958 QEQINTEPLEDTVLS(ph)PTK ddPTM_A459_MK2206_30min_R2 5 QEQINTEPLEDTVLSPTK 18 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDTVLS(0.996)PT(0.004)K;QEQINTEPLEDT(0.007)VLS(0.989)PT(0.005)K;QEQINTEPLEDT(0.484)VLS(0.515)PT(0.001)K;QEQINTEPLEDT(0.004)VLS(0.957)PT(0.039)K;QEQINTEPLEDT(0.002)VLS(0.876)PT(0.123)K 177.12 1.76E-09 121641200 292053 272580 288825 265923 281624 241774 328892 252144 227149 337825 TRUE FALSE 314412.8022 259044.0736 298454.2813 244196.2403 270566.0267 250974.879 285708.0853 285100.0865 246906.0094 326801.7979 0.962090185 0.792664163 0.91325777 0.747230406 0.827920863 0.767972761 0.874254937 0.872394486 0.755522188 1 18.3180564 -10.03767604 8.677867938 0.99994213 0.833400549 0.349933577 0.067519196 0 0 0.061756854 0.014978237 9.17E-11 10.03767604 -0.16654158 QEQINTEPLEDTVLS(ph)PTKK ddPTM_A459_MK2206_30min_R1 1 QEQINTEPLEDTVLSPTKK 19 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDT(0.005)VLS(0.974)PT(0.022)KK 123.03 0.00021361 38899000 3175.9 3280.7 3152.2 3230.1 2168.8 1910 2914 2725.7 2978.1 2454.5 TRUE FALSE 2905.773028 3067.125834 2938.237447 3478.882862 2082.412103 2018.142549 2719.612377 2701.869492 3287.684152 2758.581991 1.053357499 1.111848712 1.065126016 1.261112729 0.754884977 0.731586937 0.985873317 0.979441431 1.191802224 1 11.42971115 -6.255160067 24.9841403 0.931383417 1.117950676 0.309683142 0.132804598 679.0132807 2701657.582 0.042513318 0.053526905 5.56E-07 6.255160067 0.186567258 QEQINTEPLEDTVLS(ph)PTKK ddPTM_A459_MK2206_30min_R2 2 QEQINTEPLEDTVLSPTKK 19 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDT(0.02)VLS(0.972)PT(0.008)KK;QEQINTEPLEDT(0.005)VLS(0.947)PT(0.048)KK 80.02 0.0033729 69256000 83613 75891 77628 63769 83098 51415 98342 62075 56222 79984 TRUE FALSE 90014.47557 72122.3633 80216.07878 58558.86871 79835.15499 53371.63385 85429.57727 70188.41564 61112.08793 77374.12863 1.163366582 0.932125047 1.036729979 0.756827505 1.031806838 0.689786558 1.104110363 0.907130289 0.789825863 1 16.23956364 QEQINTEPLEDTVLSPT(ph)K ddPTM_A459_MK2206_30min_R1 2 QEQINTEPLEDTVLSPTK 18 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDTVLS(0.02)PT(0.98)K;QEQINTEPLEDTVLS(0.108)PT(0.892)K 134.34 0.00053014 20641600 9513.7 10635.5 10373 9162.5 7976.7 8101 8676.9 8724.8 9559.5 8576.6 TRUE FALSE 8704.509857 9943.127017 9668.909661 9868.197338 7658.971148 8559.671619 8098.079833 8648.519993 10553.24423 9639.133958 0.903038582 1.031537383 1.003089043 1.023763896 0.794570465 0.888012518 0.840125251 0.897229983 1.094833237 1 13.23468782 -4.42420536 13.60021655 0.944143285 3.99E-05 0.018811524 0.090455796 4112438.683 10024462.29 0.023816214 114237078.3 3.77E-05 4.42420536 -0.944103397 QEQINTEPLEDTVLSPT(ph)K ddPTM_A459_MK2206_30min_R2 1 QEQINTEPLEDTVLSPTK 18 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDTVLS(0.078)PT(0.922)K 173.45 4.59E-08 22156000 93115 94013 90635 93276 102930 75852 127090 91743 71281 112310 TRUE FALSE 100243.956 89344.45113 93656.72566 85655.05242 98888.45102 78738.60101 110402.9303 103734.1251 77480.89253 108645.3339 0.922671526 0.822349639 0.862040939 0.788391451 0.910195104 0.724730628 1.016177376 0.954795953 0.713154351 1 16.72926669 -7.268758084 24.99075309 0.917264903 0.839732499 0.15614658 0.093916722 1209.6336 4130449.014 0.037559069 0.025915547 5.39E-08 7.268758084 -0.077532404 QEQINTEPLEDTVLSPT(ph)KK ddPTM_A459_MK2206_30min_R1 1 QEQINTEPLEDTVLSPTKK 19 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDT(0.002)VLS(0.433)PT(0.564)KK 104.87 0.0011072 39922000 2540.1 2744 2717.2 2534.1 1862.4 1832.3 2044.7 2072.8 2563.4 1789.2 TRUE FALSE 2324.051156 2565.365101 2532.764035 2729.276821 1788.216664 1936.043243 1908.301794 2054.677728 2829.874603 2010.859604 1.155750084 1.275755451 1.259542949 1.35726871 0.889279719 0.962793841 0.948998026 1.021790743 1.407295963 1 10.97359664 -6.254208754 24.99964849 1.031202873 1.262875 0.381003748 0.139517309 623.6602491 2156282.893 0.042765399 0.054056186 5.57E-07 6.254208754 0.231672127 QEQLS(ph)PK ddPTM_A459_MK2206_30min_R1 1 QEQLSPK 7 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 QEQLS(1)PK 84.817 0.037033 53636000 10272 12578 12101 10082 6979.1 5956.3 8310.8 8138.3 5060.3 7972.2 TRUE FALSE 9398.31246 11759.16991 11279.61784 10858.51739 6701.107669 6293.540559 7756.401696 8067.147701 5586.336293 8959.856323 1.048935621 1.312428402 1.258906106 1.211907535 0.747903474 0.702415344 0.865683714 0.900365744 0.623485031 1 13.12925988 -6.2563981 24.26434403 0.799401228 1.219133433 0.737801262 0.117105591 135.1664467 650572.7529 0.034004369 0.042504505 5.54E-07 6.2563981 0.419732204 QEQLS(ph)PK ddPTM_A459_MK2206_30min_R2 3 QEQLSPK 7 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 QEQLS(1)PK;QEQLS(1)PK;QEQLS(1)PK 111.27 0.015063 155685000 1055040 1020820 1054620 840820 959340 641230 1124080 774910 773920 1091710 TRUE FALSE 1135814.674 970127.5632 1089780.504 772122.3164 921671.4913 665632.457 976486.9457 876193.3977 841234.1627 1056087.592 1.075492868 0.918605209 1.031903521 0.731115792 0.872722583 0.630281486 0.924626852 0.829659778 0.796557188 1 20.01029807 -5.750879559 24.99930444 0.817174237 0.999661046 0.39774659 0.102143519 203.7722847 482405.8235 0.026234795 0.044834331 1.77E-06 5.750879559 0.182486809 QEQPSIESTS(ph)PISR ddPTM_A459_MK2206_30min_R2 1 QEQPSIESTSPISR 14 0 Q5T5P2-3;Q5T5P2 Q5T5P2-3 KIAA1217 Sickle tail protein homolog 1 QEQPS(0.014)IES(0.002)T(0.044)S(0.938)PIS(0.002)R 121.95 0.0020934 0 19417 17957 17051 21376 18309 17376 22098 18461 19835 18431 TRUE FALSE 20903.58045 17065.28149 17619.47183 19629.51242 17590.09666 18037.25586 19196.50606 20873.91609 21560.21245 17829.59798 1.172408961 0.957132152 0.988214757 1.100950927 0.986567206 1.011646806 1.076665109 1.170745191 1.209237161 1 14.12198655 -7.557705786 4.47610189 1.141472253 1.031667034 0.206441921 0.077481161 0.25847187 11.99451656 0.036238828 0.020779709 2.77E-08 7.557705786 -0.109805219 QEQTEDCPPSS(ph)PSR ddPTM_A459_MK2206_30min_R2 1 QEQTEDCPPSSPSR 14 0 Q15008-4;C9J0E9;C9J7B7 Q15008-4 PSMD6 26S proteasome non-ATPase regulatory subunit 6 1 QEQTEDCPPS(0.003)S(0.995)PS(0.002)R 159.4 2.80E-05 0 9565 8735.1 5248.3 8830.4 6923.2 6332.5 7342.6 6113.4 5039.6 7587.1 TRUE FALSE 10297.30375 8301.327636 5423.275703 8108.928073 6651.360382 6573.487725 6378.5078 6912.44237 5477.935298 7339.533548 1.402991578 1.131042945 0.738912857 1.104828804 0.906237479 0.895627451 0.86906174 0.941809493 0.746360142 1 12.84147266 -4.945292455 3.390322266 0.904516071 1.399563809 0.698106275 0.103721513 0.132081678 2.889307817 0.0253333 0.136929041 1.13E-05 4.945292455 0.495047738 QERLS(ph)PEVAPPAHR ddPTM_A459_MK2206_30min_R1 2 QERLSPEVAPPAHR 14 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR 127.88 0.00064896 144187000 7940.7 8229.5 8208.8 6769.4 8438.9 8443.9 7939.8 7337.4 6233.8 5693.8 TRUE FALSE 7265.301767 7693.758054 7651.609527 7290.780361 8102.760743 8921.986321 7410.150429 7273.249885 6881.825818 6399.19093 1.135346928 1.202301688 1.195715148 1.139328462 1.266216438 1.394236618 1.157982393 1.136588979 1.075421236 1 12.6436738 -8.170948248 1.582123521 1.01172144 1.218298219 0.506537484 0.071116357 0.339658478 1.5475059 0.071279001 0.022118372 6.75E-09 8.170948248 0.206576779 QERLS(ph)PEVAPPAHR ddPTM_A459_MK2206_30min_R2 2 QERLSPEVAPPAHR 14 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR 72.489 0.028438 78486000 119727 135104 116657 131521 139010 130505 142868 119402 104963 116577 TRUE FALSE 128893.3912 128394.9318 120546.2862 120775.3136 133551.7689 135471.4592 124109.26 135008.2514 114092.492 112773.102 1.142944451 1.138524431 1.068927643 1.070958512 1.184251976 1.201274566 1.100521824 1.197167134 1.011699509 1 16.78306348 -8.286347103 19.89041376 1.005848309 1.135938964 0.577433973 0.0452143 52.12765117 41621.74406 0.045720932 0.011870066 5.17E-09 8.286347103 0.130090656 QES(ph)DEESRPQNANYPR ddPTM_A459_MK2206_30min_R2 2 QESDEESRPQNANYPR 16 1 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 QES(0.998)DEES(0.002)RPQNANYPR;QES(1)DEESRPQNANYPR 64.842 0.031505 13360900 13085.9 22427 20814.1 29058 25244.4 29353 22395.2 23725.6 26233.3 23591.1 TRUE FALSE 14087.76657 21313.30779 21508.03171 26683.86845 24253.17801 30470.04898 19454.68334 26826.61738 28515.02502 22821.32434 0.617307145 0.933920726 0.942453268 1.169251532 1.062741919 1.335156914 0.852478281 1.1755066 1.249490371 1 14.47809489 -4.405494786 0.931376235 1.123875103 1.68E-17 0.569529991 0.131615172 2.731520134 1.163757324 0.043008367 3.66654528 3.93E-05 4.405494786 -1.123875103 QES(ph)DPEDDDVK ddPTM_A459_MK2206_30min_R2 2 QESDPEDDDVK 11 0 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 QES(1)DPEDDDVK;QES(1)DPEDDDVK 158.65 0.00057607 24467000 258840 164261 195323 163172 156139 120363 212279 162328 102265 227340 TRUE FALSE 278656.9894 156104.0376 201834.9713 149840.3256 150008.1983 124943.4983 184406.5123 183544.827 111159.8248 219921.9144 1.267072407 0.709815745 0.917757432 0.681334218 0.682097547 0.56812664 0.838509035 0.834590893 0.505451333 1 17.74663185 -2.90744196 1.591804604 0.734196259 200 0.512644213 0.148311647 403.0514802 3.558126206 0.039065031 291055.924 0.001237537 2.90744196 199.2658037 QES(ph)DPEDDDVKKPALQSSVVATSK ddPTM_A459_MK2206_30min_R2 5 QESDPEDDDVKKPALQSSVVATSK 24 2 Q9H307 Q9H307 PNN Pinin 1 QES(0.906)DPEDDDVKKPALQS(0.044)S(0.044)VVAT(0.003)S(0.002)K;QES(0.994)DPEDDDVKKPALQS(0.004)S(0.001)VVATSK;QES(0.981)DPEDDDVKKPALQS(0.009)S(0.009)VVATSK;QES(0.93)DPEDDDVKKPALQS(0.051)S(0.018)VVAT(0.001)SK;QES(0.983)DPEDDDVKKPALQS(0.012)S(0.004)VVATSK 81.406 0.00024489 480571000 328021 336282 334093 279184 303786 193892 375439 290853 227109 367684 TRUE FALSE 353134.54 319582.7249 345231.4939 256373.7741 291857.8352 201270.6959 326143.4083 328868.4857 246862.5303 355686.5012 0.992825251 0.898495512 0.970606117 0.720785785 0.820547966 0.565865433 0.916940641 0.924602099 0.69404526 1 18.4402467 -5.748036995 24.98536505 0.798179902 0.948427664 0.235793207 0.121275937 336.548348 627404.1862 0.032571667 0.056008224 1.79E-06 5.748036995 0.150247762 QES(ph)PSQENIDR ddPTM_A459_MK2206_30min_R2 1 QESPSQENIDR 11 0 H3BM14;H3BM74;H7C5N1;Q9Y5A7-2;Q9Y5A7 H3BM14 NUB1 NEDD8 ultimate buster 1 1 QES(0.5)PS(0.5)QENIDR 80.371 0.043912 3732100 12659 20269 12886 19315 14989 14538 17490 11429 13091 18098 TRUE FALSE 13628.18277 19262.47093 13315.61281 17736.90271 14400.45655 15091.25378 15193.54199 12922.80954 14229.63152 17507.46374 0.778421305 1.100243371 0.760567779 1.013105209 0.822532422 0.86198972 0.867832269 0.738131447 0.812775153 1 14.09568248 QESCLGNS(ph)PPFEK ddPTM_A459_MK2206_30min_R2 1 QESCLGNSPPFEK 13 0 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 QES(0.001)CLGNS(0.999)PPFEK 93.478 0.017062 6953700 27442 25854 29449 27870 31185 31098 32122 22249 21836 34509 TRUE FALSE 29542.98062 24570.12796 30430.81496 25592.93185 29960.52021 32281.45618 27904.34281 25157.02069 23735.25581 33382.97416 0.884971497 0.736007758 0.911566921 0.766646247 0.897479058 0.9670036 0.835885463 0.753588358 0.710998837 1 15.02682487 -10.66309055 3.826861635 1.000080258 0.831194724 0.284282849 0.081183842 120284394.3 200907568.5 126041.2747 0.021011449 2.17E-11 10.66309055 -0.168885533 QESCS(ph)PHHPQVLAQQGSGSS(ph)PK ddPTM_A459_MK2206_30min_R2 1 QESCSPHHPQVLAQQGSGSSPK 22 0 Q8N1G0;Q8N1G0-2;F8WCX2 Q8N1G0 ZNF687 Zinc finger protein 687 2 QES(0.27)CS(0.73)PHHPQVLAQQGS(0.242)GS(0.243)S(0.514)PK 98.722 0.00060872 0 12417 17286 11864 15735 16339 10195 15772 12588 9292.6 17447 TRUE FALSE 13367.65507 16427.60238 12259.53984 14449.40017 15697.44876 10582.97787 13701.11745 14233.29482 10100.85355 16877.70582 0.792030339 0.97333148 0.726374779 0.856123476 0.930070054 0.627038887 0.811787905 0.843319286 0.598473137 1 14.04283119 -6.726111939 24.99950979 0.768559726 0.854978827 0.093569394 0.122527075 412.173745 291674.165 0.038337238 0.038335822 1.88E-07 6.726111939 0.086419101 QESDEES(ph)RPQNANYPR ddPTM_A459_MK2206_30min_R1 1 QESDEESRPQNANYPR 16 1 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 QES(0.101)DEES(0.899)RPQNANYPR 114.76 0.0097477 3063900 778.57 753.3 713.05 802.3 736.82 870.17 790.36 797.8 714.18 685.57 TRUE FALSE 712.3485331 704.2600331 664.6501527 864.093285 707.4708992 919.4382734 737.6365265 790.8249187 788.4215667 770.5035874 0.924523318 0.914025638 0.862617856 1.121465622 0.918192869 1.193295253 0.957343403 1.02637409 1.023254894 1 9.589657864 -5.748109103 24.99971899 1.033957674 0.901752587 0.402621674 0.074728323 224.9505401 421870.565 0.019031807 0.032720805 1.79E-06 5.748109103 -0.132205087 QESDKNGESAS(ph)PER ddPTM_A459_MK2206_30min_R2 2 QESDKNGESASPER 14 1 Q14676-3;Q14676 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 QESDKNGES(0.001)AS(0.999)PER;QESDKNGES(0.001)AS(0.999)PER 174.4 0.00041082 4671900 8979.7 9279.9 9495.3 9730.5 8396.9 6845.1 11919.6 11232 5696.2 9728.9 TRUE FALSE 9667.192736 8819.07366 9811.868563 8935.487024 8067.195515 7105.595077 10354.5422 12700.06097 6191.64518 9411.44679 1.027173925 0.937058229 1.042546251 0.949427567 0.857168477 0.75499498 1.100207272 1.349427059 0.657884523 1 13.20020081 QESDKNGESAS(ph)PERDR ddPTM_A459_MK2206_30min_R1 1 QESDKNGESASPERDR 16 2 Q14676-3;Q14676 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 QES(0.001)DKNGES(0.089)AS(0.91)PERDR 80.102 0.026735 3696500 1418 1654.3 1542.6 1653.6 1503.1 1178.5 1072.7 1497.6 758.25 811.39 TRUE FALSE 1297.391654 1546.604769 1437.89261 1780.960559 1443.228344 1245.225652 1001.14214 1484.506641 837.0728009 911.9111189 1.422717222 1.696003851 1.576790304 1.952997964 1.58264146 1.365512083 1.097850568 1.627907162 0.917932443 1 9.832749406 -6.83752292 2.91957132 1.214299196 1.668180348 0.521570322 0.217589033 0.223481883 3.858002737 0.079593038 0.070784896 1.45E-07 6.83752292 0.453881152 QESTEYRR ddPTM_A459_MK2206_30min_R1 2 QESTEYRR 8 1 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 ; 115.49 0.01328 4066400 2498.3 1696.22 1679.61 2546.6 883.57 1623.1 2585.5 4021.2 120.625 968.44 FALSE TRUE 2285.806466 1585.79577 1565.602753 2742.739573 848.3755359 1714.998519 2413.026013 3986.043072 133.1644004 1088.417659 2.100118873 1.456973577 1.438420941 2.519932998 0.77945771 1.575680536 2.217003733 3.66223668 0.122346784 1 10.08801655 -7.237190346 22.62921829 1.972249947 1.627569898 0 0.953407212 1085.270887 1012774.923 0.352304128 0.27266309 5.79E-08 7.237190346 -0.344680049 QESTEYRR ddPTM_A459_MK2206_30min_R2 4 QESTEYRR 8 1 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 ;;; 137.14 0.0034507 123298920 76199.1 115619.1 100949.07 111509.29 150219.13 104937.99 89870.9 140183.5 188459.4 116821.4 FALSE TRUE 82032.96168 109877.6236 104314.6616 102398.6243 144320.7722 108931.4787 78070.74288 158505.9648 204851.258 113009.5273 0.725894211 0.972286375 0.923060773 0.90610612 1.277067302 0.963914117 0.690833284 1.402589397 1.812690159 1 16.78608488 -7.858642211 7.076811549 1.468727334 0.940086894 0.458325793 0.237501707 0.18317532 11.44756597 0.126818005 0.06050814 1.38E-08 7.858642211 -0.52864044 QETVADFT(ph)PK ddPTM_A459_MK2206_30min_R1 3 QETVADFTPK 10 0 O75400-3;O75400;F5H578;O75400-2 O75400-3;O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 QETVADFT(1)PK;QET(0.012)VADFT(0.988)PK;QETVADFT(1)PK 135.94 0.0044675 102997600 16943.3 18447.3 18459.6 10803.9 10202.4 10636.2 18314.7 12446.2 25540.6 31553.9 TRUE FALSE 15502.18336 17246.37742 17206.61378 11636.01825 9796.016804 11238.41245 17092.95978 12337.38419 28195.63677 35463.03535 0.437136393 0.486319833 0.485198563 0.328116816 0.276231764 0.316904978 0.481993704 0.347894196 0.795071163 1 15.1140284 -8.415864847 3.178258028 0.995913234 0.394390842 0.882740871 0.074852485 0.07815912 1.479433635 0.079265722 0.021209897 3.84E-09 8.415864847 -0.601522392 down QETVADFT(ph)PK ddPTM_A459_MK2206_30min_R2 4 QETVADFTPK 10 0 O75400-3;O75400;F5H578;O75400-2 O75400-3;O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 QET(0.001)VADFT(0.999)PK;QET(0.136)VADFT(0.864)PK;QETVADFT(1)PK;QET(0.109)VADFT(0.891)PK 133.48 0.0052931 167868000 1620470 963144 1203330 885295 783778 576622 1089260 874169 572202 1345590 TRUE FALSE 1744534.429 915315.6695 1243448.422 812963.5666 753002.9376 598565.7543 946238.8536 988425.8898 621971.0957 1301683.508 1.340213975 0.703178356 0.955261716 0.624547796 0.578483888 0.4598397 0.726934656 0.759344252 0.477820524 1 20.31194728 -2.110708881 1.028916802 0.658242928 199.9998075 0.545958226 0.172800502 364.7407318 1.712131021 0.052169663 169905.1112 0.007749811 2.110708881 199.3415645 QEVGPPLPPLLAPLIAT(ph)PPR ddPTM_A459_MK2206_30min_R2 2 QEVGPPLPPLLAPLIATPPR 20 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 QEVGPPLPPLLAPLIAT(1)PPR;QEVGPPLPPLLAPLIAT(1)PPR 184.57 1.13E-13 6081700 38656 45332 45541 46958 51615 46467 52205 36344 43818 48105 TRUE FALSE 41615.53308 43080.8788 47059.31421 43121.38119 49588.33576 48235.33425 45350.42079 41094.28559 47629.21044 46535.33779 0.894278092 0.925766973 1.011259753 0.926637331 1.065606013 1.036531302 0.974537264 0.883076981 1.023506279 1 15.50603906 -5.088964807 3.981290784 0.987374577 0.89936223 0.294279322 0.050410859 0.292904934 8.243463735 0.013575811 0.044158856 8.15E-06 5.088964807 -0.088012347 QEVPSWLENMAYEHHYK ddPTM_A459_MK2206_30min_R1 1 QEVPSWLENMAYEHHYK 17 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;F6S8Q4;A0A0D9SFB3;A0A2R8Y7T2;O15523;O15523-2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 0 66.673 0.021942 14067000 3170.6 3331.3 3709.6 2730.8 2744.6 2762.2 3366.6 3078.2 3036.5 2893 FALSE TRUE 2900.923821 3114.431765 3457.802688 2941.126689 2635.27677 2918.593377 3142.020257 3051.287622 3352.155041 3251.406681 0.892205776 0.957872106 1.063478988 0.904570538 0.810503585 0.89764021 0.9663572 0.938451545 1.030986084 1 11.6668483 -8.192545866 4.765201806 1.015437136 0.929062371 0.241050068 0.061515255 0.335875685 14.4036297 0.050693082 0.017518911 6.42E-09 8.192545866 -0.086374765 QEYDESGPS(ph)IVHR ddPTM_A459_MK2206_30min_R1 2 QEYDESGPSIVHR 13 0 P60709;Q6S8J3;A5A3E0;A0A2R8YFE2;Q9BYX7;P63261;P0CG38;P0CG39 P60709;P63261;P0CG38 ACTB;POTEE;POTEF;POTEKP;ACTG1;POTEI;POTEJ "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member I;POTE ankyrin domain family member J" 1 QEYDESGPS(1)IVHR;QEYDESGPS(1)IVHR 233.28 2.10E-13 51200000 6219.7 6815.5 7315.7 6245.6 5816.6 6539.6 7890.9 5865.4 5300 6148.9 TRUE FALSE 5690.681854 6371.809711 6819.130667 6726.637194 5584.912505 6909.866501 7364.512459 5814.119426 5850.953966 6910.672154 0.82346286 0.922024598 0.986753606 0.973369456 0.808157641 0.999883419 1.065672382 0.841324736 0.846654831 1 12.75461032 QEYDESGPS(ph)IVHR ddPTM_A459_MK2206_30min_R2 4 QEYDESGPSIVHR 13 0 P60709;Q6S8J3;A5A3E0;A0A2R8YFE2;Q9BYX7;P63261;P0CG38;P0CG39 P60709;P63261;P0CG38 ACTB;POTEE;POTEF;POTEKP;ACTG1;POTEI;POTEJ "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member I;POTE ankyrin domain family member J" 1 QEYDESGPS(1)IVHR;QEYDESGPS(1)IVHR;QEYDESGPS(1)IVHR;QEYDESGPS(1)IVHR 140.75 0.00057234 104438500 487428 584209 479343 686484 528780 558373 671932 662929 482895 508160 TRUE FALSE 524745.8624 555198.0306 495324.0564 630396.0612 508017.4403 579622.2758 583706.5213 749576.0965 524896.3342 491578.7808 1.067470532 1.129418218 1.007618871 1.282390709 1.033440539 1.17910353 1.187411955 1.524834118 1.067776631 1 18.90706312 -7.123263202 3.016580449 1.239148803 1.110176308 0.046924646 0.148245113 0.544400058 9.451919566 0.059180133 0.044422953 7.53E-08 7.123263202 -0.128972495 QEYDESGPSIVHR ddPTM_A459_MK2206_30min_R1 3 QEYDESGPSIVHR 13 0 P60709;Q6S8J3;A5A3E0;A0A2R8YFE2;Q9BYX7;P63261;P0CG38;P0CG39 P60709;P63261;P0CG38 ACTB;POTEE;POTEF;POTEKP;ACTG1;POTEI;POTEJ "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member I;POTE ankyrin domain family member J" 0 ;; 212.68 7.47E-06 484094000 15775.8 13020.5 14258.8 11502.5 16706.83 16680.61 18145.46 14984.6 12505.1 12121.4 FALSE TRUE 14433.98537 12172.86308 13290.95238 12388.42454 16041.36158 17625.05172 16935.00947 14853.59122 13805.04989 13623.09054 1.059523558 0.893546369 0.975619471 0.909369611 1.17751266 1.29376309 1.243110689 1.090324635 1.013356687 1 13.73376641 -6.265533701 24.89238947 1.154070091 0.955953059 0.440733728 0.096317959 297.9526968 1811471.164 0.030966639 0.036388257 5.43E-07 6.265533701 -0.198117032 QEYDESGPSIVHR ddPTM_A459_MK2206_30min_R2 3 QEYDESGPSIVHR 13 0 P60709;Q6S8J3;A5A3E0;A0A2R8YFE2;Q9BYX7;P63261;P0CG38;P0CG39 P60709;P63261;P0CG38 ACTB;POTEE;POTEF;POTEKP;ACTG1;POTEI;POTEJ "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member I;POTE ankyrin domain family member J" 0 ;; 233.52 2.71E-13 367135600 241714 385877 283416 479465 467211 451911 434174 365733 341920 332465 FALSE TRUE 260219.8097 366714.9093 292864.948 440291.1758 448865.9486 469108.7898 377166.4323 413535.5588 371659.5836 321616.6943 0.809099199 1.140223489 0.910602444 1.368993537 1.395655004 1.458595894 1.172720319 1.285802529 1.155597922 1 18.29498277 -5.7588512 24.99998614 1.284369568 0.971999841 0.473369706 0.14779101 57.0424548 550976.0379 0.039972918 0.065367611 1.74E-06 5.7588512 -0.312369727 QEYDESGPSIVHRK ddPTM_A459_MK2206_30min_R2 1 QEYDESGPSIVHRK 14 1 P60709;Q6S8J3;A5A3E0;A0A2R8YFE2;Q9BYX7;P63261;P0CG38;P0CG39 P60709;P63261;P0CG38 ACTB;POTEE;POTEF;POTEKP;ACTG1;POTEI;POTEJ "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member I;POTE ankyrin domain family member J" 0 69.456 0.040793 4116900 7503.6 32214 20137 36574 49662 43086 33908 16844 58232 18550 FALSE TRUE 8078.081385 30614.2996 20808.35753 33585.78721 47712.02035 44725.66792 29455.83887 19045.56863 63296.9141 17944.71502 0.45016493 1.706034315 1.159581387 1.871625555 2.658834108 2.492414501 1.641477106 1.061346954 3.527329023 1 14.13127139 -4.817992032 0.968684095 2.048978963 2.03E-15 0.261698194 0.750991602 2.771774864 2.146052106 0.250826887 5.905983567 1.52E-05 4.817992032 -2.048978963 QFAS(ph)QANVVGPWIQTK ddPTM_A459_MK2206_30min_R2 1 QFASQANVVGPWIQTK 16 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 1 QFAS(1)QANVVGPWIQTK 180.83 1.36E-09 0 7985.3 10622 11103 7243.3 7542.1 12012 9517.4 6486.8 9561.9 10475 TRUE FALSE 8596.660708 10094.52693 11473.16848 6651.49922 7245.959258 12469.12508 8267.753948 7334.647033 10393.57678 10133.20161 0.848365703 0.99618337 1.132235292 0.656406482 0.715071064 1.23052176 0.815907377 0.723823261 1.025695252 1 13.30680245 -5.733634127 24.99766608 0.874483004 0.992653439 0.077661889 0.174584349 595.1489643 535050.4545 0.048384378 0.083780456 1.85E-06 5.733634127 0.118170435 QFCQEGQPHVLEALS(ph)PPQTSGLSPSR ddPTM_A459_MK2206_30min_R1 2 QFCQEGQPHVLEALSPPQTSGLSPSR 26 0 E9PR76;E9PSH4;Q9H063 E9PR76 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog 1 QFCQEGQPHVLEALS(0.968)PPQT(0.015)S(0.015)GLS(0.001)PSR;QFCQEGQPHVLEALS(0.376)PPQT(0.278)S(0.278)GLS(0.056)PS(0.012)R 154.32 6.27E-12 20553000 1342.55 1021.67 1121.96 1266.79 1629.03 1784.84 1960.57 1625.77 1375.18 1163.99 TRUE FALSE 1228.359072 955.1590973 1045.804481 1364.358385 1564.142286 1885.896098 1829.783953 1611.556064 1518.134882 1308.193869 0.938973268 0.730135739 0.799426221 1.042932869 1.195650219 1.441602918 1.398710081 1.231893913 1.160481576 1 10.35336064 -6.046080839 2.299758908 1.271024059 0.812367107 0.679613875 0.126831821 0.164151568 1.726232146 0.04092235 0.060980577 8.99E-07 6.046080839 -0.458656951 QFCQEGQPHVLEALS(ph)PPQTSGLSPSR ddPTM_A459_MK2206_30min_R2 2 QFCQEGQPHVLEALSPPQTSGLSPSR 26 0 E9PR76;E9PSH4;Q9H063 E9PR76 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog 1 QFCQEGQPHVLEALS(0.89)PPQT(0.052)S(0.052)GLS(0.005)PS(0.001)R;QFCQEGQPHVLEALS(0.973)PPQT(0.013)S(0.013)GLS(0.001)PSR 129.72 3.56E-09 65282000 16244.4 23787.6 22769.3 25030 25463.3 32834 34689 23091.7 25901 25367.1 TRUE FALSE 17488.08375 22606.34237 23528.4171 22984.96893 24463.4829 34083.52088 30134.29263 26109.86448 28153.82216 24539.3736 0.712654041 0.921227361 0.958802677 0.936656709 0.99690739 1.388931984 1.22799763 1.063998817 1.147291802 1 14.5828108 -6.533583467 24.88882078 1.175694305 0.900101011 0.5731988 0.115204997 155.9070657 362486.1938 0.039133453 0.039169722 2.93E-07 6.533583467 -0.275593294 QFCQEGQPHVLEALSPPQT(ph)SGLSPSR ddPTM_A459_MK2206_30min_R2 2 QFCQEGQPHVLEALSPPQTSGLSPSR 26 0 E9PR76;E9PSH4;Q9H063 E9PR76 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog 1 QFCQEGQPHVLEALSPPQT(0.318)S(0.318)GLS(0.318)PS(0.045)R;QFCQEGQPHVLEALS(0.042)PPQT(0.311)S(0.311)GLS(0.124)PS(0.211)R 122 1.04E-08 16325800 19373.5 29915 28310 32442 28246 28351 27598 22851 26308 23481.4 TRUE FALSE 20856.75006 28429.4646 29253.84127 29791.38482 27136.92012 29429.91717 23974.34945 25837.70416 28596.22229 22715.20384 0.918184587 1.25156106 1.287852906 1.311517389 1.194658886 1.295604362 1.055431843 1.137463011 1.258902297 1 14.47137063 -7.264146939 24.97883434 1.124404543 1.219260354 0.125516959 0.122406614 550.5106859 5078738.095 0.049851556 0.03526661 5.44E-08 7.264146939 0.094855811 QFCQEGQPHVLEALSPPQTSGLS(ph)PSR ddPTM_A459_MK2206_30min_R1 2 QFCQEGQPHVLEALSPPQTSGLSPSR 26 0 E9PR76;E9PSH4;Q9H063 E9PR76 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog 1 QFCQEGQPHVLEALS(0.002)PPQT(0.177)S(0.177)GLS(0.322)PS(0.322)R;QFCQEGQPHVLEALSPPQT(0.228)S(0.228)GLS(0.388)PS(0.156)R 123.3 5.08E-09 69630000 5848.8 5144.2 5673.1 4905.6 5403.7 4898.5 6473.4 5853.2 5124.8 4733.5 TRUE FALSE 5351.328847 4809.311645 5288.025778 5283.430162 5188.459186 5175.848837 6041.571297 5802.026089 5657.541299 5319.921716 1.005903683 0.904019251 0.994004435 0.993140584 0.975288635 0.972918233 1.135650414 1.090622456 1.063463262 1 12.3771893 -7.241300928 24.87535056 1.079985901 0.972830779 0.580220847 0.040716239 486.1776301 600535.1798 0.015107382 0.01168536 5.74E-08 7.241300928 -0.107155122 QFCQEGQPHVLEALSPPQTSGLS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 QFCQEGQPHVLEALSPPQTSGLSPSR 26 0 E9PR76;E9PSH4;Q9H063 E9PR76 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog 1 QFCQEGQPHVLEALSPPQT(0.136)S(0.136)GLS(0.637)PS(0.091)R;QFCQEGQPHVLEALSPPQT(0.108)S(0.108)GLS(0.734)PS(0.05)R 169.36 2.40E-17 67744600 112956 160341 133828 169109 160662 172686 163554 129229 151346 147753 TRUE FALSE 121603.9982 152378.6991 138289.7587 155292.2537 154353.6026 179257.6867 142079.1633 146119.674 164509.8015 142931.8317 0.850783179 1.066093517 0.967522469 1.086477742 1.079910617 1.254148111 0.99403444 1.022303235 1.15096686 1 17.12496772 -3.897281099 0.975880199 1.082795002 1.79E-12 0.389262706 0.080901761 9.991582991 2.118720442 0.026210386 17.17003903 0.000126683 3.897281099 -1.082795002 QFIAAQNLGPASGHGTPAS(ph)SPSSSSLPSPMSPTPR ddPTM_A459_MK2206_30min_R1 1 QFIAAQNLGPASGHGTPASSPSSSSLPSPMSPTPR 35 0 Q8WX93;Q8WX93-3;Q8WX93-4;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 QFIAAQNLGPAS(0.001)GHGT(0.07)PAS(0.346)S(0.346)PS(0.05)S(0.05)S(0.05)S(0.05)LPS(0.036)PMS(0.002)PT(0.001)PR 96.61 1.61E-11 7838900 707.27 263.04 643.07 217.41 1303.8 1715.4 1071.7 548.04 315.13 269.88 TRUE FALSE 647.1129725 245.9160482 599.4202001 234.1549559 1251.866885 1812.524466 1000.208848 543.2485441 347.8888912 303.3147719 2.13347002 0.810761859 1.976231478 0.771986654 4.127286242 5.975721045 3.297593593 1.791038863 1.146956639 1 8.244671951 -6.253475751 24.77856169 3.104007142 1.41888166 0.189358396 1.446431991 884.0827269 2750791.413 0.467089021 0.591880514 5.58E-07 6.253475751 -1.685125481 QFIAAQNLGPASGHGTPASSPS(ph)SSSLPSPMSPTPR ddPTM_A459_MK2206_30min_R2 1 QFIAAQNLGPASGHGTPASSPSSSSLPSPMSPTPR 35 0 Q8WX93;Q8WX93-3;Q8WX93-4;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 QFIAAQNLGPASGHGTPAS(0.076)S(0.076)PS(0.178)S(0.178)S(0.178)S(0.178)LPS(0.106)PMS(0.021)PT(0.007)PR 55.668 0.00048836 7208500 1212.3 6869.1 3732.2 7070.8 8979.8 8331.3 5900.6 4269.2 5843.2 4179.9 TRUE FALSE 1305.11462 6527.990483 3856.629685 6493.093022 8627.207932 8648.35346 5125.844132 4827.199098 6351.430974 4043.510205 0.322767732 1.614436505 0.953782602 1.605806018 2.133593708 2.138823206 1.267671867 1.193814002 1.570771595 1 11.98139254 -5.765857979 24.74488404 1.602722746 1.02873964 0.258210965 0.45387818 140.2593334 785482.5914 0.130628344 0.2015608 1.71E-06 5.765857979 -0.573983106 QFIAAQNLGPASGHGTPASSPSSSSLPS(ph)PMSPTPR ddPTM_A459_MK2206_30min_R1 1 QFIAAQNLGPASGHGTPASSPSSSSLPSPMSPTPR 35 0 Q8WX93;Q8WX93-3;Q8WX93-4;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 QFIAAQNLGPASGHGT(0.019)PAS(0.015)S(0.14)PS(0.058)S(0.136)S(0.136)S(0.136)LPS(0.317)PMS(0.033)PT(0.011)PR 112.3 5.11E-15 10900000 648.63 359.31 395.24 412.48 1041.7 1295.7 1028.9 502.61 266.56 218.19 TRUE FALSE 593.4606124 335.9188537 368.41221 444.2492811 1000.206883 1369.061414 960.2639583 498.2157338 294.2698659 245.2210245 2.420104939 1.369861554 1.502367959 1.811628028 4.078797425 5.582969149 3.915912025 2.031700727 1.200018908 1 7.937938866 -6.171741437 8.132685696 3.196544952 1.718754259 0.147719046 1.335066872 0.553113647 45.44900293 0.428173923 0.55382278 6.73E-07 6.171741437 -1.477790693 QFIAAQNLGPASGHGTPASSPSSSSLPS(ph)PMSPTPR ddPTM_A459_MK2206_30min_R2 1 QFIAAQNLGPASGHGTPASSPSSSSLPSPMSPTPR 35 0 Q8WX93;Q8WX93-3;Q8WX93-4;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 QFIAAQNLGPASGHGTPAS(0.001)S(0.001)PSSSSLPS(0.933)PMS(0.054)PT(0.011)PR 112.92 3.76E-15 5361700 4369.6 12688 8802.3 19296 19569 26374 19069 10031 15878 6361.1 TRUE FALSE 4704.139936 12057.93237 9095.764289 17719.45508 18800.62273 27377.68105 16565.21739 11342.08614 17259.03974 6153.537828 0.764461041 1.959512187 1.478135756 2.879555724 3.055254271 4.449096084 2.691982703 1.843181347 2.804734483 1 12.58720038 -5.75874894 24.21511388 2.800455451 1.456583359 0.299551646 0.877007915 56.83288434 511500.5573 0.245805092 0.402016618 1.74E-06 5.75874894 -1.343872092 QFIAAQNLGPASGHGTPASSPSSSSLPSPMS(ph)PTPR ddPTM_A459_MK2206_30min_R1 2 QFIAAQNLGPASGHGTPASSPSSSSLPSPMSPTPR 35 0 Q8WX93;Q8WX93-3;Q8WX93-4;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 QFIAAQNLGPASGHGTPAS(0.007)S(0.015)PS(0.029)S(0.049)S(0.049)S(0.032)LPS(0.009)PMS(0.648)PT(0.16)PR;QFIAAQNLGPASGHGT(0.002)PAS(0.042)S(0.042)PS(0.042)S(0.042)S(0.042)S(0.137)LPS(0.137)PMS(0.373)PT(0.137)PR 154.15 1.49E-28 62955100 5700.4 2442 3263.6 1608.29 6538.2 6190.6 5711.2 4129.1 2151.14 2397.6 TRUE FALSE 5215.551046 2283.025356 3042.075925 1732.160774 6277.769649 6541.106422 5330.216269 4092.999714 2374.758701 2694.632789 1.935533134 0.847249156 1.128938955 0.642818859 2.32973104 2.427457444 1.978086324 1.518945264 0.881292141 1 11.39587297 -4.462474015 21.1473597 1.47271503 10.70731431 0.05504363 0.606209923 777.8977341 274439.6407 0.160425106 2563.185901 3.45E-05 4.462474015 9.234599279 QFIAAQNLGPASGHGTPASSPSSSSLPSPMS(ph)PTPR ddPTM_A459_MK2206_30min_R2 6 QFIAAQNLGPASGHGTPASSPSSSSLPSPMSPTPR 35 0 Q8WX93;Q8WX93-3;Q8WX93-4;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 QFIAAQNLGPASGHGTPASSPSSSSLPS(0.001)PMS(0.848)PT(0.15)PR;QFIAAQNLGPASGHGTPAS(0.002)S(0.002)PS(0.01)S(0.01)S(0.01)S(0.01)LPS(0.029)PMS(0.771)PT(0.153)PR;QFIAAQNLGPASGHGTPAS(0.01)S(0.01)PS(0.008)S(0.008)S(0.008)S(0.008)LPS(0.022)PMS(0.689)PT(0.237)PR;QFIAAQNLGPASGHGTPASSPS(0.012)S(0.012)S(0.012)S(0.012)LPS(0.018)PMS(0.86)PT(0.072)PR;QFIAAQNLGPASGHGTPAS(0.023)S(0.023)PS(0.08)S(0.072)S(0.072)S(0.072)LPS(0.064)PMS(0.334)PT(0.261)PR;QFIAAQNLGPASGHGTPAS(0.001)S(0.001)PS(0.03)S(0.03)S(0.03)S(0.03)LPS(0.083)PMS(0.76)PT(0.033)PR 138.01 3.17E-26 137459300 91819 221840 144486 307595 273911 344748 247273 163907 244728 147546 TRUE FALSE 98848.73324 210823.7482 149303.0911 282463.5046 263155.8778 357867.6267 214805.7581 185330.2077 266013.9991 142731.5861 0.692549813 1.477064425 1.046041 1.978983855 1.843711578 2.507277026 1.504963014 1.29845266 1.863736026 1 17.12294511 -5.752813308 24.9903423 1.756074037 1.112402829 0.321360539 0.423207638 225.9477561 654579.8308 0.115993374 0.19694877 1.77E-06 5.752813308 -0.643671208 QFLLQQASGLSS(ph)PGNNDSK ddPTM_A459_MK2206_30min_R2 1 QFLLQQASGLSSPGNNDSK 19 0 B7ZBM3;Q8IVH2-3;Q8IVH2-2;Q8IVH2;A2A312 B7ZBM3 FOXP4 Forkhead box protein P4 1 QFLLQQAS(0.001)GLS(0.085)S(0.896)PGNNDS(0.019)K 162.82 1.37E-06 0 15159 17825 16387 17942 15590 15747 20349 13160 13882 17925 TRUE FALSE 16319.5847 16939.83642 16933.3344 16476.08121 14977.85827 16346.26312 17677.15186 14880.05719 15089.43127 17340.10872 0.941146619 0.976916391 0.976541421 0.950171736 0.863769571 0.942685158 1.019437199 0.858129405 0.87020396 1 14.08182532 -6.010394216 24.22286654 0.922584953 0.965620249 0.103793905 0.051943078 745.050939 1736289.075 0.015423324 0.021354169 9.76E-07 6.010394216 0.043035297 QFS(ph)ALVPAFDPRPGR ddPTM_A459_MK2206_30min_R1 1 QFSALVPAFDPRPGR 15 1 A0A087X2H1;Q9ULT8;H0YJP0;H0YJD4 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 QFS(1)ALVPAFDPRPGR 70.897 0.027721 7588800 2111.7 1990 2662.9 1905.2 3227 2729.8 2983.5 2209.9 1804.2 1732.1 TRUE FALSE 1932.088826 1860.450638 2482.149767 2051.938834 3098.461757 2884.358917 2784.476159 2190.579077 1991.753046 1946.685625 0.992501718 0.955701637 1.275064518 1.054067903 1.591660059 1.481676795 1.430367658 1.125286512 1.023150847 1 10.9268042 QFS(ph)ALVPAFDPRPGR ddPTM_A459_MK2206_30min_R2 2 QFSALVPAFDPRPGR 15 1 A0A087X2H1;Q9ULT8;H0YJP0;H0YJD4 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 QFS(1)ALVPAFDPRPGR;QFS(1)ALVPAFDPRPGR 90.729 0.0083951 10490200 32541 47678 40700 40270 51677 47308 42218 32842 40128 43812 TRUE FALSE 35032.36398 45310.37985 42056.91769 36979.81218 49647.90132 49108.33909 36674.72589 37134.56216 43618.26091 42382.41803 0.826577756 1.069084351 0.99231992 0.872527192 1.171426824 1.15869602 0.865328775 0.87617847 1.029159329 1 15.37117828 QFSIQAEDERES(ph)TDDESNPLGR ddPTM_A459_MK2206_30min_R2 1 QFSIQAEDERESTDDESNPLGR 22 1 Q14669;Q14669-2;Q14669-3;Q14669-4 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 QFSIQAEDERES(0.699)T(0.292)DDES(0.008)NPLGR 51.777 0.023612 2805000 3713.6 4058.3 4300.8 4116.8 3909.2 6065.3 4163.5 3660.8 1589.6 4971.6 TRUE FALSE 3997.916071 3856.770723 4444.186525 3780.444271 3755.705166 6296.119242 3616.827449 4139.279129 1727.860535 4809.377099 0.831275234 0.801927286 0.92406697 0.786056945 0.780913014 1.309134034 0.752036568 0.860668449 0.35926909 1 12.23163434 -8.037474088 24.8098175 0.656412502 0.884679855 0.128208704 0.208769631 921.9432066 610369.1507 0.13454408 0.050883859 9.17E-09 8.037474088 0.228267354 QFSTAS(ph)DHEQPGVSG ddPTM_A459_MK2206_30min_R1 1 QFSTASDHEQPGVSG 15 0 Q66K14;Q66K14-2;G3V133 Q66K14 TBC1D9B TBC1 domain family member 9B 1 QFS(0.05)T(0.093)AS(0.839)DHEQPGVS(0.018)G 83.292 0.023763 4920100 2115.9 1618.1 1669.3 1360.3 2067.6 1784.9 1867.6 1570 1002.8 1478.2 TRUE FALSE 1935.931594 1512.761396 1555.992567 1465.070542 1985.243114 1885.959496 1743.015812 1556.273656 1107.044649 1661.330576 1.165289812 0.910572175 0.936594191 0.881865754 1.194971755 1.135210248 1.049168562 0.936763386 0.666360244 1 10.69812346 -8.004305243 6.133506261 0.821818321 1.031688678 0.301580943 0.125580931 0.17947809 28.74247927 0.07909182 0.033555317 9.90E-09 8.004305243 0.209870357 QFSTAS(ph)DHEQPGVSG ddPTM_A459_MK2206_30min_R2 1 QFSTASDHEQPGVSG 15 0 Q66K14;Q66K14-2;G3V133 Q66K14 TBC1D9B TBC1 domain family member 9B 1 QFS(0.026)T(0.085)AS(0.887)DHEQPGVS(0.002)G 123.63 0.0014202 11769000 26111 44412 36890 48795 49391 44162 46565 30586 39633 39677 TRUE FALSE 28110.07824 42206.56466 38119.89419 44808.29241 47451.66117 45842.61586 40450.95957 34583.69522 43080.2067 38382.34274 0.732370049 1.099634927 0.993162258 1.167419423 1.236288819 1.194367321 1.053895012 0.901031379 1.122396488 1 15.22815515 -4.760411086 24.98756077 1.089085992 0.732369625 0.544113749 0.096876443 21.36717592 518971.5815 0.026193236 0.155581581 1.74E-05 4.760411086 -0.356716367 QFSTASDHEQPGVS(ph)G ddPTM_A459_MK2206_30min_R2 1 QFSTASDHEQPGVSG 15 0 Q66K14;Q66K14-2;G3V133 Q66K14 TBC1D9B TBC1 domain family member 9B 1 QFS(0.052)T(0.009)AS(0.113)DHEQPGVS(0.826)G 91.307 0.01467 11508000 52836 76088 58300 79004 74782 85878 75672 52165 70530 53302 TRUE FALSE 56881.16478 72309.58056 60243.6929 72549.12048 71845.68293 89146.14747 65736.1755 58983.14461 76664.57191 51562.76011 1.103144298 1.402360549 1.168356635 1.407006148 1.393363792 1.72888626 1.274876973 1.143909761 1.486820561 1 15.65404187 -10.88720014 3.655603054 0.998354383 1.348380443 0.255851652 0.176659285 20998567 15637852.35 254325.5331 0.043342484 1.30E-11 10.88720014 0.35002606 QFTELLS(ph)DIGFAREGLR ddPTM_A459_MK2206_30min_R1 3 QFTELLSDIGFAREGLR 17 1 Q6P158;H7C109 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 1 QFT(0.121)ELLS(0.879)DIGFAREGLR;QFT(0.064)ELLS(0.936)DIGFAREGLR;QFT(0.075)ELLS(0.925)DIGFAREGLR 112.24 0.009225 154983000 9164.8 10631.2 10674.6 10008.9 10138.7 8924.7 9937.4 10153.5 8497.1 7087.71 TRUE FALSE 8385.285634 9939.106948 9950.037893 10779.78721 9734.85411 9430.008801 9274.494178 10064.72902 9380.403952 7965.789024 1.05266228 1.247724101 1.249096337 1.353260447 1.222082845 1.183813527 1.164290712 1.263494299 1.177586291 1 12.95960155 -6.75450525 4.347505493 1.173927435 1.23539991 0.10038379 0.092788642 0.552156134 24.67090212 0.032621436 0.030689963 1.76E-07 6.75450525 0.061472475 QFTPCQLLADHANS(ph)PNKK ddPTM_A459_MK2206_30min_R2 1 QFTPCQLLADHANSPNKK 18 1 A0A2R8Y4F5;H0YFD6;P40939 A0A2R8Y4F5 HADHA "Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase" 1 QFTPCQLLADHANS(1)PNKK 61.985 0.022353 4023600 8193.1 7894.3 9669.9 8234.1 6449.1 5034.7 7248.6 6005 9023.2 7456.8 TRUE FALSE 8820.370035 7502.280541 9992.28964 7561.34769 6195.87593 5226.299036 6296.850113 6789.874118 9808.021626 7213.485227 1.222761225 1.040035476 1.385223554 1.04822391 0.858929593 0.724517882 0.872927568 0.941275112 1.359678618 1 12.81648076 -5.993519372 24.38059318 0.941720914 1.201462054 0.302726932 0.172374552 153.2948388 576694.6037 0.050398087 0.074524631 1.02E-06 5.993519372 0.25974114 QFTQS(ph)PETEASADSFPDTK ddPTM_A459_MK2206_30min_R1 1 QFTQSPETEASADSFPDTK 19 0 O15061;A0A075B7B1;O15061-2;H0YL34 O15061 SYNM Synemin 1 QFT(0.06)QS(0.642)PET(0.299)EASADSFPDTK 107.03 0.001291 0 1663.2 1967 1950.6 1446.5 2045.6 1505.8 1677.1 1805.5 1712.9 1727.1 TRUE FALSE 1521.736106 1838.947942 1818.198707 1557.909681 1964.11942 1591.057095 1565.223719 1789.714704 1890.962085 1941.066187 0.7839692 0.947390643 0.936701035 0.802605131 1.011876583 0.819682041 0.806373183 0.922026624 0.974187329 1 10.9226336 -8.17023807 3.175209095 0.991109428 0.87811167 0.289778306 0.070640905 0.343064199 6.229345797 0.058143767 0.018304364 6.76E-09 8.17023807 -0.112997757 QGAIYHGLATLLNQPS(ph)PMMQR ddPTM_A459_MK2206_30min_R1 3 QGAIYHGLATLLNQPSPMMQR 21 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 QGAIYHGLAT(0.005)LLNQPS(0.995)PMMQR;QGAIYHGLATLLNQPS(1)PMMQR;QGAIYHGLAT(0.002)LLNQPS(0.998)PMMQR 209.29 6.39E-18 49280500 12301.8 12846 12848.6 10513.2 13917.4 13640.6 15083.1 13837.6 12064.3 11402.5 TRUE FALSE 11255.46731 12009.72307 11976.47283 11322.92849 13363.04049 14412.91898 14076.93392 13716.61932 13318.42716 12815.12778 0.878295363 0.937152034 0.934557426 0.883559546 1.042755149 1.124680083 1.098462236 1.070345888 1.039273847 1 13.64556024 -6.354358454 4.742076222 1.073653033 0.9125646 0.811356616 0.036378599 0.091441686 3.456094625 0.011461758 0.01309878 4.42E-07 6.354358454 -0.161088432 QGAIYHGLATLLNQPS(ph)PMMQR ddPTM_A459_MK2206_30min_R2 1 QGAIYHGLATLLNQPSPMMQR 21 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 QGAIYHGLATLLNQPS(1)PMMQR 95.444 0.00027548 2352000 13640 17719 15540 19037 13989 18988 17466 16053 18349 16515 TRUE FALSE 14684.28889 16839.10023 16058.09584 17481.6162 13439.72157 19710.60165 15172.69322 18151.18222 19944.96285 15976.1169 0.91914005 1.054017089 1.005131343 1.094234369 0.841238309 1.23375422 0.949710954 1.136144805 1.248423692 1 13.96362917 -7.152811703 1.158086324 1.123551497 1.001785888 0.144061626 0.116209168 0.936351448 2.498289215 0.07130165 0.044641764 7.03E-08 7.152811703 -0.121765609 QGDDEQS(ph)DWFYEK ddPTM_A459_MK2206_30min_R1 1 QGDDEQSDWFYEK 13 0 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 1 QGDDEQS(1)DWFYEK 113.52 0.0045406 3095400 1164 1173.2 1247.8 1046.7 1172.5 1018 1292.4 1341.1 1197.7 766.2 TRUE FALSE 1064.995688 1096.824467 1163.102813 1127.317015 1125.796842 1075.63828 1206.186354 1329.374904 1322.205201 861.1226405 1.236752627 1.273714585 1.350681956 1.309124813 1.307359474 1.249111601 1.400713786 1.543769542 1.535443546 1 9.75007491 -7.340391728 6.495294824 1.416771791 1.29203388 0.03383035 0.14603053 0.495288328 33.72476208 0.058606483 0.039290054 4.57E-08 7.340391728 -0.124737911 QGDETPS(ph)TNNGSDDEKTGLK ddPTM_A459_MK2206_30min_R2 1 QGDETPSTNNGSDDEKTGLK 20 1 Q9Y3P9;C9JGR5;B5MCD9;Q9Y3P9-4;Q9Y3P9-3 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 QGDET(0.02)PS(0.485)T(0.485)NNGS(0.009)DDEKTGLK 56.298 0.023084 57000000 43038 43271 38960 26458 45514 32275 40337 37627 32168 41935 TRUE FALSE 46333.02237 41122.22506 40258.90695 24296.29677 43726.89167 33503.24774 35040.70345 42544.97809 34965.91449 40566.66438 1.142145234 1.013695005 0.992413539 0.598922715 1.077902074 0.825881256 0.863780742 1.04876698 0.861937135 1 15.30800706 -5.071520963 2.193505343 0.899615095 1.136378365 0.243528137 0.13037124 0.535442281 4.352326504 0.034470177 0.194897673 8.48E-06 5.071520963 0.23676327 QGDETPSTNNGS(ph)DDEK ddPTM_A459_MK2206_30min_R2 1 QGDETPSTNNGSDDEK 16 0 Q9Y3P9;C9JGR5;B5MCD9;Q9Y3P9-4;Q9Y3P9-3 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 QGDETPST(0.018)NNGS(0.982)DDEK 231.83 4.82E-52 0 26305 16587 18426 15958 14647 8944.5 21704 15023 15512 20888 TRUE FALSE 28318.93103 15763.3137 19040.31364 14654.18035 14071.88518 9284.889215 18854.23873 16986.55768 16861.20572 20206.42627 1.401481422 0.780113885 0.942290012 0.725223756 0.69640643 0.459501799 0.933081312 0.840651259 0.83444769 1 14.30252657 -3.2647384 11.5372247 0.839357577 1.01933779 0 0.232906848 0 0 0.053220484 0 0.000543578 3.2647384 0.179980213 QGDETPSTNNGS(ph)DDEKTGLK ddPTM_A459_MK2206_30min_R1 1 QGDETPSTNNGSDDEKTGLK 20 1 Q9Y3P9;C9JGR5;B5MCD9;Q9Y3P9-4;Q9Y3P9-3 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 QGDET(0.003)PS(0.011)T(0.028)NNGS(0.955)DDEKT(0.003)GLK 70.295 0.0061164 4731800 1282.7 1185.7 1428 1091.1 866.93 839.35 1238.9 1091 1184.2 1044.4 TRUE FALSE 1173.599629 1108.510714 1331.071339 1175.136711 832.3983423 886.8732716 1156.255242 1081.461502 1307.301828 1173.788157 0.999839385 0.944387374 1.133996225 1.001148891 0.709155513 0.75556502 0.985062965 0.921343 1.113745969 1 10.19695634 -6.024309044 24.7286604 0.901222397 1.02618349 0.158533678 0.118097978 1149.323131 1169162.266 0.036975602 0.048011802 9.46E-07 6.024309044 0.124961093 QGDETPSTNNGS(ph)DDEKTGLK ddPTM_A459_MK2206_30min_R2 2 QGDETPSTNNGSDDEKTGLK 20 1 Q9Y3P9;C9JGR5;B5MCD9;Q9Y3P9-4;Q9Y3P9-3 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 QGDET(0.01)PS(0.203)T(0.203)NNGS(0.583)DDEKT(0.001)GLK;QGDET(0.006)PS(0.254)T(0.254)NNGS(0.486)DDEKTGLK 68.238 0.0074523 69191400 92635 103508 117569 90310 101739 75921 96769 83741 86949 108289 TRUE FALSE 99727.20682 98367.94323 121488.6918 82931.38411 97744.21566 78810.22686 84063.11406 94686.23623 94511.66685 104755.5388 0.951999369 0.939023792 1.159735258 0.791665864 0.933069667 0.752325154 0.802469397 0.903878089 0.902211644 1 16.676667 -5.782954483 24.99815706 0.860358408 1.009130041 0.362623526 0.088901162 239.2082827 277932.5639 0.024670051 0.036628759 1.65E-06 5.782954483 0.148771633 QGEVPES(ph)PEAR ddPTM_A459_MK2206_30min_R2 1 QGEVPESPEAR 11 0 H7BYP4;U5Y3L1;Q9H930-3;Q9H930-1;Q9H930-2;Q9H930 H7BYP4 SP140L Nuclear body protein SP140-like protein 1 QGEVPES(1)PEAR 82.202 0.040436 4213300 20303 20432 15249 25600 25936 22037 21425 15418 20578 16095 TRUE FALSE 21857.41329 19417.37659 15757.39405 23508.39811 24917.62232 22875.63348 18611.87176 17433.18554 22367.83724 15569.82147 1.403831979 1.2471162 1.012047189 1.509869471 1.60037945 1.469229016 1.195381193 1.119677934 1.436614883 1 13.92646478 -10.81184089 5.324839324 0.999946409 1.3275336 0.241470068 0.17667933 0.000121927 1.63E-05 0.185560262 0.044997632 1.54E-11 10.81184089 0.327587191 QGGS(ph)PDEPDSK ddPTM_A459_MK2206_30min_R1 2 QGGSPDEPDSK 11 0 V9GZ50;Q9ULX6;Q9ULX6-2 V9GZ50 AKAP8L A-kinase anchor protein 8-like 1 QGGS(0.995)PDEPDS(0.005)K;QGGS(0.936)PDEPDS(0.064)K 158.31 0.00053142 9196500 9998.5 10324.5 7100.8 6702.8 4952.5 4712.4 8617.1 8545.4 1359.49 6295.8 TRUE FALSE 9148.075071 9652.373173 6618.81748 7219.050817 4755.231438 4979.212016 8042.268982 8470.688469 1500.81385 7075.771235 1.29287321 1.364144325 0.935419937 1.020249324 0.672044259 0.703698841 1.136592566 1.197139957 0.212106045 1 12.78867169 -5.371781216 2.099418042 0.852686589 1.35160286 0.326779806 0.269008113 0.413630984 3.426789142 0.076261916 0.239278701 4.25E-06 5.371781216 0.498916271 QGGS(ph)PDEPDSK ddPTM_A459_MK2206_30min_R2 1 QGGSPDEPDSK 11 0 V9GZ50;Q9ULX6;Q9ULX6-2 V9GZ50 AKAP8L A-kinase anchor protein 8-like 1 QGGS(0.864)PDEPDS(0.136)K 155.56 0.00053578 10569000 85676 82245 69602 69835 80210 43600 79492 75069 63511 80867 TRUE FALSE 92235.42043 78160.8329 71922.49594 64129.25711 77060.55238 45259.22855 69054.60491 84880.77605 69035.07198 78228.31641 1.179054141 0.999137352 0.919392098 0.819770386 0.985072361 0.578553018 0.882731574 1.085039023 0.882481883 1 16.2554033 -4.788853335 1.678128326 0.884277309 1.28110221 0.321413798 0.127337631 1.175325881 3.310947078 0.036675612 0.760667067 1.63E-05 4.788853335 0.3968249 QGGSPDEPDS(ph)K ddPTM_A459_MK2206_30min_R2 3 QGGSPDEPDSK 11 0 V9GZ50;Q9ULX6;Q9ULX6-2 V9GZ50 AKAP8L A-kinase anchor protein 8-like 1 QGGS(0.099)PDEPDS(0.901)K;QGGSPDEPDS(1)K;QGGS(0.006)PDEPDS(0.994)K 156 0.00054161 15244900 116609 98070 101155 106342 111423 78848 117273 115339 97334 130738 TRUE FALSE 125536.6747 93199.98641 104527.4572 97653.51843 107047.9732 81848.61589 101874.9142 130414.2033 105799.9354 126472.0298 0.992604254 0.736921726 0.826486753 0.772135298 0.846416187 0.647167726 0.805513396 1.031170319 0.836548093 1 16.94845883 -7.696155054 9.354363809 0.950147623 0.796270237 0.347170864 0.095043951 0.347560549 46.59183144 0.043072425 0.024776693 2.01E-08 7.696155054 -0.153877385 QGGSQPSSFS(ph)PGQSQVTPQDQEK ddPTM_A459_MK2206_30min_R1 2 QGGSQPSSFSPGQSQVTPQDQEK 23 0 Q9H0L4 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant 1 QGGS(0.001)QPS(0.044)S(0.183)FS(0.772)PGQSQVTPQDQEK;QGGSQPS(0.005)S(0.015)FS(0.979)PGQSQVTPQDQEK 149.87 5.63E-08 12067400 2455.65 2424.81 2573.57 2209.25 2531 2123.94 2692.56 2438.06 2419.5 2031.24 TRUE FALSE 2246.784072 2266.954428 2398.883239 2379.406818 2430.184911 2244.195647 2512.944235 2416.744298 2671.015683 2282.885346 0.98418612 0.993021586 1.050811966 1.042280473 1.064523417 0.983052281 1.10077549 1.058635863 1.170017446 1 11.15664269 -4.258342951 0.422493408 1.075857072 0.860235874 0.255620473 0.048507885 11.26617898 1.126336845 0.035500031 1.336030369 5.52E-05 4.258342951 -0.215621198 QGGSQPSSFS(ph)PGQSQVTPQDQEK ddPTM_A459_MK2206_30min_R2 2 QGGSQPSSFSPGQSQVTPQDQEK 23 0 Q9H0L4 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant 1 QGGS(0.004)QPS(0.024)S(0.061)FS(0.911)PGQSQVTPQDQEK;QGGSQPS(0.004)S(0.012)FS(0.984)PGQSQVTPQDQEK 157.61 1.15E-09 14247400 96069 98982 105138 97267 102342 78516 114696 82982 79796 111824 TRUE FALSE 103424.1165 94066.69781 108643.2484 89319.97496 98323.53885 81503.9814 99636.27743 93828.03232 86736.51184 108175.192 0.956079805 0.869577359 1.004326837 0.825697401 0.90892872 0.753444296 0.921064022 0.867371072 0.801815187 1 16.72301016 -5.777606134 24.99755793 0.861907094 0.935952967 0.1822105 0.071401859 372.9196754 576619.202 0.018862573 0.028075669 1.67E-06 5.777606134 0.074045873 QGHDS(ph)LEHDELR ddPTM_A459_MK2206_30min_R2 1 QGHDSLEHDELR 12 0 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 QGHDS(1)LEHDELR 80.361 0.02665 4923700 14757 14465 15027 17943 20084 16490 14999 14286 13010 17531 TRUE FALSE 15886.80727 13746.68913 15527.99268 16476.9995 19295.40125 17117.53851 13029.61328 16153.22925 14141.58628 16958.96491 0.9367793 0.810585387 0.915621488 0.971580494 1.137769985 1.009350429 0.768302391 0.952489102 0.833870838 1 14.0497605 -5.515083673 8.7760245 0.952954784 0.870964552 0.096026265 0.098057581 0.348569855 256.4674369 0.028183606 0.053160603 3.05E-06 5.515083673 -0.081990232 QGIAVMTPTVPGS(ph)PK ddPTM_A459_MK2206_30min_R1 2 QGIAVMTPTVPGSPK 15 0 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;E7EX50;H0Y7S5;Q9UPX8-2 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 QGIAVMTPTVPGS(1)PK;QGIAVMTPTVPGS(1)PK 176.68 1.93E-05 64857000 9691 13348 14588 11326.7 7910.6 7852.3 9879.4 10360.6 12939 12342.5 TRUE FALSE 8866.729561 12479.04277 13597.8072 12199.0844 7595.504051 8296.89044 9220.363252 10270.01837 14284.05535 13871.58208 0.63920103 0.899612077 0.980263616 0.879429926 0.547558599 0.598121425 0.664694423 0.740363883 1.029735128 1 13.75984472 -8.260377036 24.39487391 1.014867606 0.747247159 0.400412698 0.13269379 76.2641368 1751436.643 0.116746917 0.038344172 5.49E-09 8.260377036 -0.267620447 QGIAVMTPTVPGS(ph)PK ddPTM_A459_MK2206_30min_R2 4 QGIAVMTPTVPGSPK 15 0 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;E7EX50;H0Y7S5;Q9UPX8-2 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 QGIAVMTPTVPGS(0.999)PK;QGIAVMTPTVPGS(1)PK;QGIAVMTPT(0.002)VPGS(0.998)PK;QGIAVMT(0.001)PT(0.014)VPGS(0.984)PK 169.67 5.77E-05 44976600 231681 188307 240992 173212 183691 143226 225333 163222 169083 239201 TRUE FALSE 249418.6755 178955.9482 249026.553 159060.0255 176478.3684 148676.5658 195746.5064 184555.6758 183789.5337 231395.891 1.077887228 0.773375653 1.076192632 0.687393475 0.762668549 0.642520337 0.845937694 0.797575424 0.794264466 1 17.82000372 -5.767591467 24.9999132 0.776657579 0.955574223 0.326609076 0.120121345 163.0995964 662782.0699 0.031772104 0.048491455 1.71E-06 5.767591467 0.178916644 QGLAET(ph)ASPVAVSLR ddPTM_A459_MK2206_30min_R2 1 QGLAETASPVAVSLR 15 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 QGLAET(0.594)AS(0.299)PVAVS(0.107)LR 103.67 0.012868 34876000 57160 50024 49295 58249 48315 47250 62636 50360 42606 58314 TRUE FALSE 61536.21355 47539.8809 50938.4707 53489.87037 46417.91034 49048.13186 54411.81796 56942.22491 46311.79287 56411.21896 1.090850627 0.842738054 0.902984754 0.948213341 0.822848915 0.869474774 0.964556678 1.009413127 0.820967774 1 15.78369449 -7.282432191 23.80404583 0.949518822 0.90673256 0.038739625 0.084285976 1518.615985 1721970.075 0.0343718 0.023207714 5.22E-08 7.282432191 -0.042786263 QGLAETAS(ph)PVAVSLR ddPTM_A459_MK2206_30min_R1 3 QGLAETASPVAVSLR 15 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 QGLAET(0.009)AS(0.782)PVAVS(0.209)LR;QGLAET(0.075)AS(0.64)PVAVS(0.285)LR;QGLAET(0.002)AS(0.99)PVAVS(0.007)LR 212.37 7.68E-07 51743100 4911.8 4625.4 4912.7 3455.72 4803.1 4425.5 5007.6 3990.7 4917.7 4822.9 TRUE FALSE 4494.025617 4324.285619 4579.239612 3721.880153 4611.782356 4676.067986 4673.552141 3955.809731 5428.912513 5420.397263 0.829095249 0.797780201 0.844816236 0.686643427 0.850819992 0.86267994 0.862215796 0.729800703 1.001570964 1 12.40418288 -8.277147589 24.44596004 1.000785578 0.809883676 0.660620141 0.055263389 414.3050467 644755.4628 0.052420497 0.013736 5.28E-09 8.277147589 -0.190901902 QGLAETAS(ph)PVAVSLR ddPTM_A459_MK2206_30min_R2 1 QGLAETASPVAVSLR 15 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 QGLAET(0.179)AS(0.82)PVAVS(0.001)LR 180.39 2.02E-05 37682000 55994 41600 53347 48505 43979 44494 57817 30480 36262 46699 TRUE FALSE 60280.94369 39534.20449 55125.56235 44541.98634 42252.16348 46187.25035 50225.55845 34463.84065 39416.00321 45175.21545 1.334380879 0.875130403 1.220261194 0.98598282 0.935295229 1.022402436 1.111794552 0.762892668 0.872513895 1 15.46324386 -1.522878745 0.383274643 0.92788674 5.163534469 0.329150167 0.133160666 89.30773382 1.213957012 0.100875995 281.737378 0.03 1.522878745 4.235647729 QGLAETASPVAVS(ph)LR ddPTM_A459_MK2206_30min_R1 1 QGLAETASPVAVSLR 15 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 QGLAET(0.016)AS(0.052)PVAVS(0.932)LR 106.35 0.0045056 44197000 1845.5 1724 1857.7 1043 1894.7 1937.7 2204.6 1559.4 1985.7 2479.9 TRUE FALSE 1688.530534 1611.767287 1731.6045 1123.332041 1819.230087 2047.410899 2057.535157 1545.76633 2192.120621 2787.128734 0.605831555 0.578289502 0.621286157 0.403042754 0.652725532 0.734595024 0.738227528 0.554608874 0.786515741 1 11.44456393 -10.08059812 0.246224255 1.203029399 0.536474137 0.654488773 0.089342559 7.371447146 0.533961265 1.302860139 0.174248386 8.31E-11 10.08059812 -0.666555262 QGLAETASPVAVS(ph)LR ddPTM_A459_MK2206_30min_R2 2 QGLAETASPVAVSLR 15 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 QGLAET(0.013)AS(0.02)PVAVS(0.967)LR;QGLAET(0.16)AS(0.091)PVAVS(0.749)LR 134.08 0.00048198 49756000 153419 149564 126328 163249 130152 144259 168208 128004 129143 156643 TRUE FALSE 165164.8766 142136.8692 130539.7125 149911.0345 125041.5785 149748.8773 146122.0875 144734.5623 140375.6247 151531.7517 1.089968767 0.938000568 0.861467719 0.989304438 0.82518401 0.988234318 0.964300128 0.955143464 0.926377628 1 17.2092606 -10.62517397 3.858907965 1.000017209 0.945164052 0.045869072 0.068587271 13066972.56 5999144.375 1952.953549 0.01613958 2.37E-11 10.62517397 -0.054853157 QGLSVS(ph)PFPK ddPTM_A459_MK2206_30min_R2 2 QGLSVSPFPK 10 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 QGLS(0.006)VS(0.994)PFPK;QGLS(0.008)VS(0.992)PFPK 114.87 0.0068248 11742600 73055 73030 67499 64950 66712 58066 76983 57608 64403 75417 TRUE FALSE 78648.14697 69403.4364 69749.38297 59643.37724 64092.55168 60275.74232 66875.03963 65137.5634 70004.65653 72956.14947 1.078019434 0.951303446 0.956045289 0.817523645 0.878507873 0.826191387 0.916647056 0.892831706 0.959544288 1 16.15474197 -4.670730268 1.425402883 0.893697119 1.186249221 0.47298975 0.054518427 1.288087884 1.975780507 0.01546805 0.582150179 2.13E-05 4.670730268 0.292552102 QGNFFAS(ph)PMLK ddPTM_A459_MK2206_30min_R1 1 QGNFFASPMLK 11 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 QGNFFAS(1)PMLK 107.53 0.010493 16897000 3774.5 3552.9 3150.9 3341.7 3353.2 2977.7 2929 2598.6 2289.8 2682.9 TRUE FALSE 3453.458954 3321.605564 2937.025687 3599.078313 3219.634943 3146.294801 2733.611754 2575.880714 2527.832904 3015.277907 1.145320286 1.101591849 0.97404809 1.193614129 1.067773865 1.043451018 0.906587001 0.854276386 0.8383416 1 11.55807526 -7.185420471 2.43514362 0.882172813 1.094588596 0.661344193 0.066507604 0.174947069 2.030733271 0.029752933 0.020847477 6.52E-08 7.185420471 0.212415784 QGNFFAS(ph)PMLK ddPTM_A459_MK2206_30min_R2 1 QGNFFASPMLK 11 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 QGNFFAS(1)PMLK 101.45 0.015259 8690500 71754 77378 61273 67291 81205 60551 65285 56816 57494 70781 TRUE FALSE 77247.54141 73535.52104 63315.81124 61793.11005 78016.48368 62855.31074 56713.00108 64242.04628 62494.72419 68471.42177 1.128172008 1.073959312 0.924704199 0.902465707 1.139402128 0.917978758 0.828272579 0.938231522 0.912712524 1 16.06321435 -6.957548322 24.87059287 0.908723649 1.023231145 0.320427084 0.081892522 170.8916693 100117.4323 0.029956987 0.026419555 1.10E-07 6.957548322 0.114507496 QGPPS(ph)PCQQLVLTK ddPTM_A459_MK2206_30min_R2 1 QGPPSPCQQLVLTK 14 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 QGPPS(1)PCQQLVLTK 159.04 0.00030125 5462600 21212 30403 26122 29370 30028 24044 28388 25434 20601 26275 TRUE FALSE 22836.00703 28893.23123 26992.89444 26970.37705 28848.94984 24959.01127 24660.6215 28758.31113 22392.83774 25417.6489 0.89843113 1.136738938 1.061974479 1.061088583 1.134996787 0.981955938 0.970216466 1.131430812 0.880995635 1 14.63354297 -6.804838184 24.99855052 0.999715196 1.063305409 0.129441189 0.083875721 300.2095523 172924.4017 0.028241568 0.024906863 1.57E-07 6.804838184 0.063590213 QGPSPVS(ph)PNALDR ddPTM_A459_MK2206_30min_R2 1 QGPSPVSPNALDR 13 0 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 QGPS(0.208)PVS(0.792)PNALDR 145.46 0.00062665 13977000 45051 56877 40385 56161 51466 42279 43035 38062 35907 44344 TRUE FALSE 48500.1392 54052.57089 41731.41574 51572.46665 49445.18624 43887.95697 37384.45281 43036.83409 39030.12596 42897.05891 1.130616887 1.260053073 0.972826968 1.202237821 1.152647466 1.02309944 0.871492213 1.003258386 0.909855523 1 15.38859112 -6.918211171 3.796059162 0.945959108 1.143562474 0.59277949 0.077405882 0.157925907 4.450931729 0.027883415 0.024116764 1.21E-07 6.918211171 0.197603366 QGPVS(ph)PGPAPPPSFIMSYK ddPTM_A459_MK2206_30min_R1 2 QGPVSPGPAPPPSFIMSYK 19 0 P29375 P29375 KDM5A Lysine-specific demethylase 5A 1 QGPVS(0.923)PGPAPPPS(0.06)FIMS(0.015)Y(0.002)K;QGPVS(1)PGPAPPPSFIMSYK 143.33 4.77E-05 9592600 1962.56 1901.63 2225.3 1667.63 2036.73 2082.3 1338.28 1438.82 1550.59 1259.04 TRUE FALSE 1795.633966 1777.833541 2074.252836 1796.071152 1955.602731 2200.198027 1249.005783 1426.240548 1711.779379 1415.01938 1.268981889 1.256402256 1.465882987 1.26929085 1.382032471 1.55488897 0.88267751 1.007930045 1.209721508 1 10.4666061 -7.266614256 24.99986812 1.025743102 1.362093038 0.678871828 0.114929794 270.3721469 1306163.274 0.047967287 0.033438012 5.41E-08 7.266614256 0.336349937 QGPVS(ph)PGPAPPPSFIMSYK ddPTM_A459_MK2206_30min_R2 2 QGPVSPGPAPPPSFIMSYK 19 0 P29375 P29375 KDM5A Lysine-specific demethylase 5A 1 QGPVS(1)PGPAPPPSFIMSYK;QGPVS(0.998)PGPAPPPS(0.002)FIMSYK 203.23 1.07E-15 11547000 69678 97167 82616 91649 82355 82624 104772 78763 68129 85883 TRUE FALSE 75012.60125 92341.82807 85370.37621 84160.98353 79121.3289 85768.31422 91015.31055 89057.59453 74054.73727 83080.64474 0.902889012 1.111472213 1.027560348 1.013003495 0.952343703 1.032350128 1.095505588 1.071941543 0.891359684 1 16.34222479 -8.256855158 24.92599776 0.945679843 1.028447785 0.199858788 0.064026756 525.6508078 2858186.655 0.04582984 0.016033468 5.54E-09 8.256855158 0.082767942 QGPVSQSATQQPVTADKQQGHEPVS(ph)PR ddPTM_A459_MK2206_30min_R1 2 QGPVSQSATQQPVTADKQQGHEPVSPR 27 1 Q9BTA9-5;Q9BTA9;A0A0A0MRT2;Q9BTA9-2 Q9BTA9-5 WAC WW domain-containing adapter protein with coiled-coil 1 QGPVSQSATQQPVT(0.003)ADKQQGHEPVS(0.997)PR;QGPVSQSATQQPVTADKQQGHEPVS(1)PR 134.61 2.74E-12 28294400 3962.78 3892.72 4067.28 3524.85 4512.52 3889.88 3921.01 4361.49 2773.32 1819.28 TRUE FALSE 3625.724752 3639.30322 3791.204366 3796.334558 4332.776773 4110.121644 3659.446577 4323.357953 3061.616538 2044.666141 1.773260034 1.779900956 1.854192374 1.856701435 2.119063198 2.010167607 1.789752617 2.114456666 1.497367456 1 10.99764958 -8.54049972 4.103791299 1.000922443 1.908002798 0.84281438 0.124088854 0.06999867 3.824786777 0.12449178 0.03259138 2.88E-09 8.54049972 0.907080355 QGPVSQSATQQPVTADKQQGHEPVS(ph)PR ddPTM_A459_MK2206_30min_R2 3 QGPVSQSATQQPVTADKQQGHEPVSPR 27 1 Q9BTA9-5;Q9BTA9;A0A0A0MRT2;Q9BTA9-2 Q9BTA9-5 WAC WW domain-containing adapter protein with coiled-coil 1 QGPVSQSATQQPVTADKQQGHEPVS(1)PR;QGPVSQSATQQPVTADKQQGHEPVS(1)PR;QGPVSQSATQQPVT(0.045)ADKQQGHEPVS(0.955)PR 131.9 3.13E-12 25967700 19046.8 48415 39785.5 45982 66839 51341 45750 30846.6 54002 38713.1 TRUE FALSE 20505.03765 46010.7815 41111.92871 42225.12351 64214.56502 53294.81773 39742.97004 34878.35653 58698.99635 37449.89472 0.547532585 1.22859575 1.097784894 1.127509806 1.714679454 1.423096597 1.061230488 0.931333901 1.567400838 1 15.19267404 -4.760374338 6.338633363 1.24541872 0.525665897 0.424251227 0.241653957 0.128904356 22.75085464 0.062151054 0.400525253 1.74E-05 4.760374338 -0.719752822 QGQDVAPPPNPVPQRT(ph)SPTGPK ddPTM_A459_MK2206_30min_R1 1 QGQDVAPPPNPVPQRTSPTGPK 22 1 Q9UPY8-2 Q9UPY8-2 MAPRE3 Microtubule-associated protein RP/EB family member 3 1 QGQDVAPPPNPVPQRT(0.462)S(0.462)PT(0.076)GPK 78.343 0.0020046 6275100 2599.6 3091.2 3140.1 2798.7 3152.7 2558.9 2341.9 3479.9 1755.7 1174 TRUE FALSE 2378.490369 2889.962318 2926.958761 3014.256359 3027.121283 2703.782707 2185.676124 3449.475601 1938.211298 1319.443983 1.802645962 2.190287996 2.218327415 2.284489828 2.29424009 2.049183399 1.65651301 2.614340317 1.468960655 1 10.36571439 -8.494803762 5.585380637 1.001105781 2.131945769 0.68993205 0.25226831 0.081965018 8.035672147 0.236019146 0.061254118 3.20E-09 8.494803762 1.130839988 QGQDVAPPPNPVPQRT(ph)SPTGPK ddPTM_A459_MK2206_30min_R2 2 QGQDVAPPPNPVPQRTSPTGPK 22 1 Q9UPY8-2 Q9UPY8-2 MAPRE3 Microtubule-associated protein RP/EB family member 3 1 QGQDVAPPPNPVPQRT(0.476)S(0.476)PT(0.049)GPK;QGQDVAPPPNPVPQRT(0.465)S(0.465)PT(0.069)GPK 94.037 0.00034292 95476000 77447 223619 163428 204357 254987 219143 198461 144622 267130 174252 TRUE FALSE 83376.40187 212514.4056 168876.608 187660.3794 244974.9292 227482.6404 172402.8323 163524.592 290364.4845 168566.1715 0.494621199 1.260717994 1.00184163 1.113274257 1.453286427 1.349515377 1.022760562 0.970091392 1.722554899 1 17.36295551 -4.758762634 24.99557927 1.20602807 0.494620251 0.463539838 0.230978865 66.28034902 618807.5607 0.056454485 0.377023604 1.74E-05 4.758762634 -0.71140782 QGS(ph)FSEDVISHK ddPTM_A459_MK2206_30min_R1 4 QGSFSEDVISHK 12 0 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390;E9PNZ4 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 QGS(0.994)FS(0.005)EDVISHK;QGS(0.999)FS(0.001)EDVISHK;QGS(0.946)FS(0.054)EDVISHK;QGS(0.801)FS(0.039)EDVIS(0.16)HK 156.29 0.00028704 61029900 11269.6 12481.4 13244.5 10434 10033.24 9075.58 11264.7 10890.7 10608.9 10397.7 TRUE FALSE 10311.06134 11668.85859 12345.50024 11237.62849 9633.594805 9589.431497 10513.25242 10795.48376 11711.73312 11685.84557 0.882354749 0.998546363 1.056449032 0.961644446 0.824381492 0.820602278 0.89965697 0.923808525 1.002215291 1 13.51247451 -4.404391494 10.25352002 0.936168465 5.62E-05 0.050102238 0.074014803 84717.22168 202858.497 0.020700913 1715933.975 3.94E-05 4.404391494 -0.936112294 QGS(ph)FSEDVISHK ddPTM_A459_MK2206_30min_R2 4 QGSFSEDVISHK 12 0 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390;E9PNZ4 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 QGS(0.917)FS(0.083)EDVISHK;QGS(0.967)FS(0.033)EDVISHK;QGS(0.999)FS(0.001)EDVISHK;QGS(0.831)FS(0.169)EDVISHK 175.7 6.84E-05 136844500 531865 518229 549129 521589 493639 412004 595873 467609 489832 560016 TRUE FALSE 572584.9933 492494.5014 567436.6868 478973.5102 474256.2525 427683.1009 517634.1593 528727.1018 532436.7019 541742.7238 1.056931581 0.909092969 1.047428349 0.884134644 0.875427083 0.789457951 0.95549813 0.975974533 0.982822064 1 19.04724835 -10.89661417 16.52391913 1 0.937273987 0.045637117 0.077232753 5.34E-11 0 0.078062124 0.018932846 1.27E-11 10.89661417 -0.062726013 QGS(ph)FTIEKPSPNIPIELIPHINK ddPTM_A459_MK2206_30min_R1 4 QGSFTIEKPSPNIPIELIPHINK 23 1 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 QGS(0.529)FT(0.46)IEKPS(0.011)PNIPIELIPHINK;QGS(0.483)FT(0.483)IEKPS(0.034)PNIPIELIPHINK;QGS(0.732)FT(0.268)IEKPSPNIPIELIPHINK;QGS(0.83)FT(0.17)IEKPS(0.001)PNIPIELIPHINK 125.83 4.24E-06 272557000 31788.9 35384.6 36496.3 31406.5 27766.6 24978.5 27535.9 29620.3 29921.3 26699.4 TRUE FALSE 29085.08712 33081.05611 34019.03284 33825.43407 26660.59753 26392.76108 25699.03035 29361.33284 33031.72621 30007.12324 0.969272759 1.102440105 1.133698574 1.127246814 0.888475623 0.879549861 0.856430993 0.978478763 1.100796166 1 14.8730174 -6.258185659 24.99476339 0.941282691 1.088150963 0.401137875 0.07874925 287.9454446 2211965.804 0.025283111 0.031293488 5.52E-07 6.258185659 0.146868272 QGS(ph)FTIEKPSPNIPIELIPHINK ddPTM_A459_MK2206_30min_R2 3 QGSFTIEKPSPNIPIELIPHINK 23 1 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 QGS(0.498)FT(0.498)IEKPS(0.004)PNIPIELIPHINK;QGS(0.399)FT(0.399)IEKPS(0.203)PNIPIELIPHINK;QGS(0.446)FT(0.446)IEKPS(0.109)PNIPIELIPHINK 81.788 0.00020201 160915700 110733 123973 109497 116430 117331 92028 126688 92533 92655 109306 TRUE FALSE 119210.8036 117816.6811 113147.5753 106917.2966 112723.9954 95530.19003 110053.7134 104627.3808 100713.9644 105739.3542 1.127402418 1.114217899 1.070061154 1.011140057 1.066055267 0.903449721 1.040801831 0.989483827 0.952473799 1 16.69015289 -5.567644229 0.854162764 0.983075126 1.149116561 0.63176301 0.040462973 0.604416176 0.704324151 0.016513903 0.076521601 2.71E-06 5.567644229 0.166041435 QGS(ph)ITSPQANEQS(ph)VTPQR ddPTM_A459_MK2206_30min_R2 1 QGSITSPQANEQSVTPQR 18 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QGS(0.89)IT(0.097)S(0.014)PQANEQS(0.821)VT(0.179)PQR 134.58 0.0069011 12147000 30391 26525 28852 28770 26120 24223 32002 25774 19007 31695 TRUE FALSE 32717.75833 25207.80707 29813.91128 26419.39897 25094.39756 25144.82324 27800.09896 29142.7503 20660.1945 30660.79475 1.067087745 0.822151131 0.972378946 0.861667129 0.818452286 0.820096917 0.906698577 0.95048907 0.673831017 1 14.90410747 -4.75306838 24.99431612 0.868971191 1.067088114 0.30195665 0.090108964 386.8243853 1154899.881 0.021204765 0.236624499 1.77E-05 4.75306838 0.198116924 QGS(ph)PDQVS(ph)PVSEMTSTSLYQDK ddPTM_A459_MK2206_30min_R1 2 QGSPDQVSPVSEMTSTSLYQDK 22 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 QGS(1)PDQVS(1)PVSEMTSTSLYQDK;QGS(1)PDQVS(1)PVSEMTSTSLYQDK 137.7 5.31E-05 15046500 7593.5 8589.5 7941 6786.4 7101.7 6461.7 7774.7 7027.7 7717.7 7835.8 TRUE FALSE 6947.63295 8030.321989 7401.987045 7309.089704 6818.824251 6827.55587 7256.063949 6966.25756 8519.982533 8806.558061 0.788915817 0.911857043 0.840508516 0.829959861 0.774289365 0.775280856 0.823938694 0.791030674 0.96745885 1 13.10436255 -8.335867313 4.841708445 0.994566574 0.818802642 0.746700988 0.038924851 0.117232886 4.899291637 0.039619576 0.010491106 4.61E-09 8.335867313 -0.175763933 QGS(ph)PDQVS(ph)PVSEMTSTSLYQDKQEGK ddPTM_A459_MK2206_30min_R1 1 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 QGS(0.993)PDQVS(0.843)PVS(0.136)EMT(0.011)S(0.016)TSLYQDKQEGK 97.23 0.00026955 0 1105.2 1507.3 1276.6 1608.8 1421 621.58 706.11 1435.9 757.82 256.34 TRUE FALSE 1011.196936 1409.174496 1189.947949 1732.710055 1364.398561 656.7733224 659.0066903 1423.346078 836.5981009 288.0973345 3.509914239 4.891313898 4.130367784 6.014321715 4.735894428 2.279692465 2.287444594 4.940504154 2.903873104 1 8.170412502 -6.749277877 24.75450584 2.90390578 4.71563604 0.440163007 1.098017304 210.5723303 428615.0435 0.365653758 0.362973706 1.78E-07 6.749277877 1.81173026 QGS(ph)PDQVS(ph)PVSEMTSTSLYQDKQEGK ddPTM_A459_MK2206_30min_R2 2 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 QGS(0.995)PDQVS(0.953)PVS(0.026)EMT(0.006)S(0.006)T(0.005)S(0.003)LY(0.004)QDKQEGK;QGS(0.997)PDQVS(0.643)PVS(0.27)EMT(0.057)S(0.016)T(0.016)S(0.001)LYQDKQEGK 71.623 0.0012234 8942000 28997 67027 54095 53271 74634 49856 65105 41216 62004 47226 TRUE FALSE 31217.03261 63698.53665 55898.5003 48918.58889 71703.49415 51753.30502 56556.63529 46603.07272 67396.99584 45685.01949 0.683310043 1.394298117 1.223563018 1.070779644 1.569518738 1.132828783 1.237968943 1.020095279 1.47525374 1 15.47943355 -4.751382602 24.93436857 1.238364785 0.683308873 0.451476921 0.182755535 358.055085 887684.8004 0.042625271 0.567582909 1.77E-05 4.751382602 -0.555055912 QGS(ph)PDQVSPVSEMTSTSLYQDK ddPTM_A459_MK2206_30min_R1 2 QGSPDQVSPVSEMTSTSLYQDK 22 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.998)PDQVS(0.002)PVSEMTSTSLYQDK;QGS(1)PDQVSPVSEMTSTSLYQDK 215.03 1.78E-24 67537000 14265.2 15970.9 15950 12327.3 11254.1 11404.1 13923.3 11908.1 16274.8 15533.8 TRUE FALSE 13051.86983 14931.19151 14867.35844 13276.75078 10805.82537 12049.79029 12994.50206 11803.98874 17966.6237 17458.24442 0.747604943 0.855251602 0.851595274 0.760486018 0.618952577 0.6902063 0.744318945 0.676126903 1.029119725 1 14.09162087 -8.268564556 24.98690517 1.014559918 0.745147946 0.711405071 0.069157486 364.2340885 1277295.584 0.070319552 0.01966321 5.39E-09 8.268564556 -0.269411972 QGS(ph)PDQVSPVSEMTSTSLYQDK ddPTM_A459_MK2206_30min_R2 1 QGSPDQVSPVSEMTSTSLYQDK 22 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.999)PDQVS(0.001)PVSEMTSTSLYQDK 135.08 1.18E-05 12552000 90367 68060 84503 74808 73764 58109 86383 63984 54403 84413 TRUE FALSE 97285.567 64680.23937 87320.28784 68695.9471 70867.65473 60320.37871 75040.80834 72346.92849 59134.8746 81658.61072 1.191369363 0.792081065 1.069333498 0.841257848 0.867852809 0.73868975 0.918957691 0.885968153 0.724171941 1 16.3173174 -4.752857488 24.99964031 0.869906186 1.191369967 0.468823567 0.102321865 288.7798808 841172.2423 0.0246222 0.280901934 1.77E-05 4.752857488 0.32146378 QGS(ph)PDQVSPVSEMTSTSLYQDKQEGK ddPTM_A459_MK2206_30min_R1 3 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.419)PDQVS(0.358)PVS(0.216)EMT(0.008)STSLYQDKQEGK;QGS(0.891)PDQVS(0.085)PVS(0.018)EMT(0.005)S(0.001)TSLYQDKQEGK;QGS(0.55)PDQVS(0.368)PVS(0.041)EMT(0.019)S(0.014)T(0.005)S(0.002)LY(0.001)QDKQEGK 143.47 4.49E-10 78282000 4075.31 4176.69 4435.64 3761.03 3805.66 2754.21 3054.22 4254.63 2977.15 1914.49 TRUE FALSE 3728.683484 3904.786722 4134.561115 4050.705182 3654.072504 2910.15099 2850.478557 4217.432218 3286.635396 2151.671475 1.73292416 1.814769014 1.921557804 1.882585343 1.698248337 1.35250712 1.32477406 1.960072561 1.527480117 1 11.0712421 -6.55356647 4.987539747 1.487166416 1.837854599 0.402376953 0.22984694 0.225054569 14.21368372 0.077071451 0.07889245 2.80E-07 6.55356647 0.350688183 QGS(ph)PDQVSPVSEMTSTSLYQDKQEGK ddPTM_A459_MK2206_30min_R2 3 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.994)PDQVS(0.004)PVS(0.002)EMTSTSLYQDKQEGK;QGS(0.909)PDQVS(0.073)PVS(0.018)EMT(0.001)STSLYQDKQEGK;QGS(0.903)PDQVS(0.041)PVS(0.009)EMT(0.044)S(0.002)T(0.001)SLYQDKQEGK 119.61 4.25E-09 43526500 35743 81617 61768 61962 86568 62312 73131 46367.2 74332 53699 TRUE FALSE 38479.51156 77564.01846 63827.31429 56899.50639 83168.90535 64683.32682 63528.81185 52427.55224 80797.263 51946.80603 0.740748364 1.493143167 1.228705269 1.095341769 1.601039827 1.245183906 1.22295896 1.009254587 1.555384617 1 15.66474743 -4.74621454 24.98874612 1.273610007 0.740746924 0.378986515 0.204136702 883.4371922 1449917.505 0.048361376 1.129885488 1.79E-05 4.74621454 -0.532863083 QGS(ph)PGSVSK ddPTM_A459_MK2206_30min_R2 4 QGSPGSVSK 9 0 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 1 QGS(0.891)PGS(0.108)VSK;QGS(0.99)PGS(0.005)VS(0.006)K;QGS(0.996)PGS(0.003)VSK;QGS(0.917)PGS(0.071)VS(0.012)K 113.95 0.0088205 734873000 1720910 1060720 1433190 1262040 1818310 821870 1615630 2911900 2023930 1942150 TRUE FALSE 1852664.193 1008046.187 1480971.839 1158927.295 1746914.013 853146.8388 1403495.84 3292495.328 2199967.773 1878777.805 0.986100745 0.53654359 0.788263432 0.616851707 0.929814057 0.45409672 0.747025985 1.752466588 1.170956868 1 20.84136302 -7.674470285 9.14561923 1.344865268 0.709584177 0.56456965 0.234730343 0.177816257 16.87449254 0.102693455 0.059099039 2.12E-08 7.674470285 -0.635281091 QGS(ph)PSQSLVACECEASK ddPTM_A459_MK2206_30min_R2 3 QGSPSQSLVACECEASK 17 0 Q4AC94 Q4AC94 C2CD3 C2 domain-containing protein 3 1 QGS(0.97)PS(0.03)QSLVACECEASK;QGS(0.973)PS(0.026)QSLVACECEASK;QGS(0.97)PS(0.03)QSLVACECEASK 251.74 1.17E-30 22508800 79857 88113 79291 90710 84568 71353 98327 79500 68858 99050 TRUE FALSE 85970.91332 83737.43655 81934.52237 83298.70283 81247.4354 74068.38841 85416.54679 89890.92296 74847.14437 95818.00661 0.897231286 0.873921714 0.855105687 0.869342891 0.847934937 0.77301116 0.891445667 0.938142278 0.781138609 1 16.54800918 -11.47157634 2.438766882 1.105145875 0.859727265 0.44194638 0.047656842 18464851.95 9045120.042 11015630.69 0.012063887 3.38E-12 11.47157634 -0.24541861 QGS(ph)PTPALPEK ddPTM_A459_MK2206_30min_R2 1 QGSPTPALPEK 11 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 QGS(0.594)PT(0.406)PALPEK 113.37 0.0071372 3729600 36942 45690 43878 37839 26137 21613 33443 32584 21477 34941 TRUE FALSE 39770.30792 43421.10104 45340.87062 34747.43266 25110.73005 22435.49786 29051.89393 36842.84068 23345.03064 33800.87803 1.176605764 1.284614589 1.34141103 1.028003847 0.742901709 0.663754883 0.859501161 1.089996557 0.690663438 1 15.0447731 -5.969635357 4.036146769 0.83938069 1.266163881 0.685589109 0.129176845 0.124617367 4.527684253 0.039132149 0.057873745 1.07E-06 5.969635357 0.426783191 QGS(ph)PTPALPEKR ddPTM_A459_MK2206_30min_R2 1 QGSPTPALPEKR 12 1 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 QGS(0.979)PT(0.021)PALPEKR 75.445 0.025486 16493000 111780 116780 106120 102370 88062 68006 96282 93075 96070 100930 TRUE FALSE 120337.9627 110980.875 109657.9878 94006.04353 84604.2434 70594.01598 83640.05774 105240.2221 104425.9949 97636.66237 1.232507952 1.136672151 1.123123069 0.962815005 0.866521257 0.723027747 0.856646015 1.077876072 1.069536713 1 16.57513536 -5.716942412 2.570302758 0.920763347 1.178824856 0.516464204 0.101966664 0.247962355 3.328252359 0.033992724 0.064069981 1.92E-06 5.716942412 0.258061509 QGS(ph)PVAAGAPAK ddPTM_A459_MK2206_30min_R1 7 QGSPVAAGAPAK 12 0 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 1 QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK 138.28 0.0012539 4184881000 90881.8 125865.5 104669.8 95350.2 76639.7 66489.7 81323.1 85539 87144.3 79726.7 TRUE FALSE 83151.82567 117671.6331 97565.1056 102694.0889 73586.97846 70254.28935 75898.18438 84791.14154 96203.26183 89603.8455 0.92799394 1.313243114 1.088849536 1.146090197 0.821247995 0.7840544 0.847041597 0.946289091 1.073651039 1 16.45127303 -6.251586372 24.71480793 0.899711873 1.130758804 0.417914813 0.118825473 540.0174656 1354552.649 0.035561082 0.045325335 5.60E-07 6.251586372 0.231046931 QGS(ph)PVAAGAPAK ddPTM_A459_MK2206_30min_R2 12 QGSPVAAGAPAK 12 0 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 1 QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK 156.96 0.00044022 6511070100 1278770.3 1723241 1368598.6 1336152 1284920 926493.3 1458682 1082078.5 997661 1289987 TRUE FALSE 1376673.937 1637667.358 1414226.994 1226984.107 1234467.585 961751.6518 1267155.301 1223509.875 1084435.75 1247894.83 1.103197084 1.312344052 1.13329021 0.983243201 0.989240083 0.770699284 1.015434371 0.980459127 0.869012135 1 20.25106492 -5.737995586 2.533562007 0.93485473 1.212444753 0.641002005 0.083511058 0.162972132 2.13024196 0.024010016 0.044629425 1.83E-06 5.737995586 0.277590023 QGS(ph)PVEPK ddPTM_A459_MK2206_30min_R1 1 QGSPVEPK 8 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 QGS(1)PVEPK 84.821 0.03936 0 8348.7 9862.2 9292.2 8264.3 6118.6 4774.6 6447.2 7517.1 2275 6504 TRUE FALSE 7638.599224 9220.168987 8661.471354 8900.817818 5874.883206 5044.933726 6017.119052 7451.378787 2511.494391 7309.764623 1.044985662 1.261349642 1.184917956 1.217661344 0.803703472 0.690163635 0.823161806 1.019373287 0.343580747 1 12.83560924 -6.278883012 7.82774462 0.778047158 1.18400637 0.531942482 0.182504294 0.146022466 51.54559387 0.053564448 0.062584288 5.26E-07 6.278883012 0.405959213 QGS(ph)PVEPK ddPTM_A459_MK2206_30min_R2 1 QGSPVEPK 8 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 QGS(1)PVEPK 93.839 0.0235 29305000 232010 253110 235340 191900 211370 132820 242990 215750 160180 213660 TRUE FALSE 249772.864 240540.9255 243186.1181 176221.1561 203070.5518 137874.5582 211085.1211 243949.2658 174112.1669 206688.2917 1.208451925 1.163785928 1.176583909 0.852593801 0.982496638 0.667065159 1.021272755 1.180276172 0.842390081 1 17.65709714 -5.748065608 24.80760231 0.937058114 1.181025259 0.442592795 0.127410785 210.099864 389719.7675 0.035974545 0.061846531 1.79E-06 5.748065608 0.243967144 QGS(ph)SLNLFEDVQITEPEAEPESK ddPTM_A459_MK2206_30min_R1 2 QGSSLNLFEDVQITEPEAEPESK 23 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 QGS(0.751)S(0.249)LNLFEDVQITEPEAEPESK;QGS(0.792)S(0.208)LNLFEDVQITEPEAEPESK 148.35 7.20E-08 7800000 7636.3 7487.7 7865.3 7368.3 5864.7 4311.2 6090.3 6433.2 7289 7086.8 TRUE FALSE 6986.792585 7000.249369 7331.42535 7935.807743 5631.09658 4555.296418 5684.027199 6376.955211 8046.717634 7964.766287 0.877212505 0.878902044 0.920482169 0.996364169 0.707000856 0.571930959 0.713646452 0.800645616 1.010289234 1 12.95941631 -6.264641872 24.99823383 0.774838119 0.915590491 0.149903775 0.128719073 477.9828801 3731065.309 0.041349145 0.048844866 5.44E-07 6.264641872 0.140752372 QGS(ph)VVSSR ddPTM_A459_MK2206_30min_R2 1 QGSVVSSR 8 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 QGS(0.989)VVS(0.011)SR 97.163 0.020492 18423000 56219 60317 47331 59511 56508 41989 63472 60070 63041 47753 TRUE FALSE 60523.16987 57321.74549 48908.99192 54648.76093 54289.21199 43586.92082 55138.05016 67921.35525 68524.19223 46194.82352 1.31017212 1.240869455 1.058754817 1.183006163 1.175222846 0.943545564 1.193598026 1.470323947 1.483373829 1 15.49544358 -7.605056351 7.28366113 1.355600744 1.147288015 0.173018544 0.155794488 0.310348066 23.23046112 0.072630178 0.041646184 2.48E-08 7.605056351 -0.208312729 QGSFS(ph)EDVISHK ddPTM_A459_MK2206_30min_R1 1 QGSFSEDVISHK 12 0 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390;E9PNZ4 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 QGS(0.253)FS(0.578)EDVIS(0.169)HK 139.21 0.0011769 16243000 4915.8 5017.8 5700.6 4631.6 4152.8 3911.5 4900.7 4461.1 4444.6 4590.5 TRUE FALSE 4497.685396 4691.140308 5313.659155 4988.326635 3987.385182 4132.96575 4573.783245 4422.097073 4906.632075 5159.205797 0.871778637 0.90927567 1.029937429 0.966878785 0.772868023 0.801085654 0.886528552 0.857127482 0.951044069 1 12.33293328 -2.32350817 19.13722275 0.898979847 0.268864628 0 0.079319568 0 0 0.019422279 0 0.004747794 2.32350817 -0.63011522 QGSGRES(ph)PSLASR ddPTM_A459_MK2206_30min_R1 4 QGSGRESPSLASR 13 1 H3BUF6;Q8WWM7-7;H3BSK9;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 QGS(0.06)GRES(0.94)PSLASR;QGS(0.013)GRES(0.849)PS(0.051)LAS(0.087)R;QGS(0.001)GRES(0.987)PS(0.012)LASR;QGSGRES(0.86)PS(0.139)LASR 171.11 0.00099857 684606000 14678.7 15525 15870.7 13769.9 17062.3 16230.4 18329.4 16808.7 14874.5 12539.4 TRUE FALSE 13430.19948 14514.31968 14793.4411 14830.46008 16382.67246 17149.35122 17106.67917 16661.74331 16420.7575 14092.87554 0.952977939 1.029904766 1.049710619 1.052337406 1.162479042 1.216880911 1.213852994 1.182281307 1.165181475 1 13.78267839 -6.093972567 1.940718082 1.173523764 1.008002977 0.529607254 0.062412564 0.239493913 1.788356386 0.01994745 0.029631138 8.05E-07 6.093972567 -0.165520787 QGSGRES(ph)PSLASR ddPTM_A459_MK2206_30min_R2 1 QGSGRESPSLASR 13 1 H3BUF6;Q8WWM7-7;H3BSK9;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 QGS(0.042)GRES(0.915)PS(0.042)LASR 70.134 0.03398 517490000 93914 102290 108120 110960 132010 136660 127040 87134 126690 104840 TRUE FALSE 101104.128 97210.42734 111724.6668 101894.2131 126826.6241 141860.6921 110359.4954 98522.71298 137709.2672 101419.0794 0.996894555 0.958502364 1.101613893 1.004684855 1.250520364 1.398757442 1.088153196 0.971441602 1.35782407 1 16.62996956 -6.24901653 24.05592897 1.182922113 1.017514498 0.259470989 0.134184833 679.4604292 1315722.812 0.040722336 0.052165625 5.64E-07 6.24901653 -0.165407614 QGSIT(ph)SPQANEQSVT(ph)PQR ddPTM_A459_MK2206_30min_R2 2 QGSITSPQANEQSVTPQR 18 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QGS(0.024)IT(0.931)S(0.045)PQANEQS(0.019)VT(0.981)PQR;QGS(0.007)IT(0.825)S(0.168)PQANEQS(0.006)VT(0.994)PQR 195.25 2.25E-20 11068000 76554 62895 58668 55853 53751 50364 68913 55680 45175 72484 TRUE FALSE 82415.0331 59771.72576 60623.96184 51289.63124 51640.46566 52280.63731 59864.64032 62957.56718 49104.23984 70118.85302 1.175361968 0.852434448 0.864588612 0.73146706 0.736470485 0.745600292 0.853759549 0.897869324 0.700300101 1 16.09751478 -4.54754766 1.947190564 0.804790931 1.511266223 0.593300676 0.088089501 1.175092125 2.723363309 0.022896961 1.856917802 2.83E-05 4.54754766 0.706475291 QGSIT(ph)SPQANEQSVTPQR ddPTM_A459_MK2206_30min_R2 2 QGSITSPQANEQSVTPQR 18 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QGS(0.159)IT(0.554)S(0.282)PQANEQS(0.004)VT(0.002)PQR;QGS(0.001)IT(0.745)S(0.254)PQANEQSVTPQR 264.01 1.24E-42 30299400 46359 46239 42765 54050 46622 40764 51607 43679 38477 53841 TRUE FALSE 49908.28068 43942.8385 44190.76376 49633.9421 44791.38602 42315.30258 44830.93891 49387.99527 41823.65991 52084.17258 0.958223549 0.843688904 0.848448993 0.952956333 0.859980754 0.812440718 0.860740157 0.94823423 0.803001331 1 15.66855741 -10.6918856 4.356862583 1.00002967 0.876165735 0.317406847 0.054369956 10765372.26 26418582.52 1704.518889 0.012776695 2.03E-11 10.6918856 -0.123863935 QGSITS(ph)PQANEQS(ph)VTPQRR ddPTM_A459_MK2206_30min_R2 1 QGSITSPQANEQSVTPQRR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QGS(0.002)IT(0.059)S(0.937)PQANEQS(0.968)VT(0.033)PQRR 81.639 0.018858 39622000 16379 21296 16035 21620 22729 20260 19573 21216 18014 18959 TRUE FALSE 17632.98883 20238.47161 16569.5989 19853.57684 21836.54526 21031.0085 17003.04159 23989.00405 19580.82516 18340.36938 0.961430409 1.10349313 0.903449574 1.082506924 1.190627342 1.14670583 0.927082832 1.307989144 1.067635267 1 14.16273508 -5.984352499 24.31950053 1.117046975 0.99954735 0.186646415 0.107922623 279.4906678 434381.9346 0.0292916 0.043429458 1.04E-06 5.984352499 -0.117499626 QGSITS(ph)PQANEQSVT(ph)PQRR ddPTM_A459_MK2206_30min_R2 1 QGSITSPQANEQSVTPQRR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QGS(0.01)IT(0.459)S(0.531)PQANEQS(0.002)VT(0.998)PQRR 98.326 0.0021316 151100000 33710 37459 34469 36265 32007 32707 30832 36092 26098 38891 TRUE FALSE 36290.86352 35598.84053 35618.17926 33302.03349 30750.24436 33951.6878 26783.72136 40809.34832 28367.95687 37621.98986 0.964618396 0.946224287 0.946738314 0.885174698 0.817347633 0.902442639 0.71191666 1.084720624 0.754025956 1 15.19928854 -5.775511658 4.352872146 0.873586996 0.953194179 0.095895264 0.102559861 0.450850615 20.01480683 0.027263448 0.044598385 1.68E-06 5.775511658 0.079607183 QGSITS(ph)PQANEQSVTPQR ddPTM_A459_MK2206_30min_R1 2 QGSITSPQANEQSVTPQR 18 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QGSIT(0.028)S(0.972)PQANEQSVTPQR;QGS(0.172)IT(0.172)S(0.655)PQANEQSVTPQR 253.09 3.20E-33 20338100 2098.9 1931.27 2229.93 1676.73 2295.84 2074.91 2413.86 1807.71 2271 2654.3 TRUE FALSE 1920.377533 1805.543972 2078.568565 1805.872035 2204.391831 2192.389611 2252.835804 1791.905382 2507.078577 2983.134723 0.643744823 0.605250563 0.69677328 0.605360536 0.738951484 0.734928126 0.755190768 0.600678665 0.840417484 1 11.54261342 -14.52287874 0.147539527 2.137474771 0.585782811 0.732268191 0.061566759 69.12401615 0.60826236 22.88934999 0.319577441 3.00E-15 14.52287874 -1.55169196 QGSITS(ph)PQANEQSVTPQR ddPTM_A459_MK2206_30min_R2 2 QGSITSPQANEQSVTPQR 18 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QGSIT(0.232)S(0.768)PQANEQSVTPQR;QGS(0.005)IT(0.095)S(0.889)PQANEQS(0.011)VTPQR 211.89 8.44E-12 27312900 96477 106317 104276 113673 94555 100316 120869 94370 90664 112836 TRUE FALSE 103863.3533 101037.4524 107752.5098 104385.5523 90842.2956 104133.5957 104998.7551 106704.483 98549.79084 109154.1706 0.95152895 0.925639871 0.98715889 0.956313 0.832238431 0.954004736 0.961930768 0.977557545 0.902849523 1 16.73600773 -6.97183048 24.9999945 0.958607761 0.930699648 0.097666544 0.043806618 593.9219512 527094.4968 0.015907723 0.014028994 1.07E-07 6.97183048 -0.027908113 QGSITSPQANEQS(ph)VTPQR ddPTM_A459_MK2206_30min_R2 1 QGSITSPQANEQSVTPQR 18 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QGSITSPQANEQS(0.5)VT(0.5)PQR 152.59 9.07E-05 19898000 51927 40045 37471 48568 36595 41058 51575 39693 37152 43644 TRUE FALSE 55902.57105 38056.42353 38720.26444 44599.83904 35158.09642 42620.49096 44803.14055 44881.01139 40383.4138 42219.89985 1.324081091 0.901385926 0.917109339 1.056370081 0.832737561 1.009488206 1.061185382 1.063029793 0.956501885 1 15.36563554 -4.753466997 24.99910885 0.979167025 1.324081718 0.671224037 0.07275305 182.9734581 573706.9121 0.01869746 0.200671214 1.76E-05 4.753466997 0.344914693 QGSITSPQANEQSVT(ph)PQR ddPTM_A459_MK2206_30min_R1 2 QGSITSPQANEQSVTPQR 18 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QGSITSPQANEQS(0.001)VT(0.999)PQR;QGSITSPQANEQSVT(1)PQR 263.19 1.64E-42 18318600 4511.7 4250.7 4275.6 3192.4 3555.9 4312.6 5441 3571.8 5437.7 7033.5 TRUE FALSE 4127.956223 3973.978657 3985.384185 3438.279201 3414.260973 4556.775685 5078.040818 3540.572129 6002.968374 7904.86308 0.522204646 0.502725805 0.504168655 0.434957464 0.431919053 0.576452196 0.642394532 0.44789797 0.759401942 1 12.94852476 -8.511485035 3.061485164 0.999141932 0.509529316 0.863106988 0.062780761 0.081888584 1.871404325 0.064597986 0.017220013 3.08E-09 8.511485035 -0.489612616 QGSITSPQANEQSVT(ph)PQR ddPTM_A459_MK2206_30min_R2 3 QGSITSPQANEQSVTPQR 18 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QGSITSPQANEQS(0.017)VT(0.983)PQR;QGSITSPQANEQSVT(1)PQR;QGSITSPQANEQS(0.015)VT(0.985)PQR 250.39 1.36E-32 34477500 66049 53639 56680 59654 48445 52208 64991 49148 38126 62921 TRUE FALSE 71105.76222 50975.36526 58569.68291 54780.07738 46542.80588 54194.81202 56457.60363 55571.81235 41442.13056 60867.89292 1.168198188 0.837475438 0.962242655 0.89998314 0.764652819 0.890367802 0.927543257 0.912990572 0.680853707 1 15.8933938 -4.757026559 24.99714298 0.874565879 1.168198624 0.492733581 0.089208037 111.1329758 629450.8906 0.021460589 0.165049893 1.75E-05 4.757026559 0.293632746 QGSITSPQANEQSVT(ph)PQRR ddPTM_A459_MK2206_30min_R1 6 QGSITSPQANEQSVTPQRR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QGSITSPQANEQS(0.136)VT(0.864)PQRR;QGSITSPQANEQSVT(1)PQRR;QGSITSPQANEQS(0.001)VT(0.999)PQRR;QGSITSPQANEQSVT(1)PQRR;QGSITSPQANEQS(0.006)VT(0.994)PQRR;QGSITSPQANEQS(0.012)VT(0.988)PQRR 166.43 8.20E-09 203289100 8025.86 8105.44 8354.44 6415.44 8531.8 8671.6 10052.3 8530.82 7405.74 8083.39 TRUE FALSE 7343.218462 7577.774383 7787.36389 6909.5583 8191.96034 9162.578498 9381.729408 8456.23594 8175.593175 9084.82138 0.808295304 0.834113745 0.85718404 0.760560721 0.901719472 1.008559015 1.032681768 0.930809268 0.899917878 1 13.14924243 -6.513619365 4.993972428 0.972763895 0.819858045 0.757341179 0.042448195 0.098039599 7.069017338 0.014707677 0.015683667 3.06E-07 6.513619365 -0.15290585 QGSITSPQANEQSVT(ph)PQRR ddPTM_A459_MK2206_30min_R2 2 QGSITSPQANEQSVTPQRR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QGSITSPQANEQS(0.002)VT(0.998)PQRR;QGSITSPQANEQS(0.388)VT(0.612)PQRR 176.46 1.10E-10 61191000 66831 70839 80219 75649 77995 69101 82876 55642 58138 73672 TRUE FALSE 71947.63274 67321.23827 82893.46142 69468.23471 74932.52441 71730.68698 71994.28165 62914.60045 63194.73815 71268.08867 1.00953504 0.944619668 1.163121714 0.974745303 1.051417623 1.00649096 1.010189595 0.882787817 0.886718577 1 16.12096861 -7.68355825 5.970144969 0.913987888 1.024826916 0.349380537 0.062098616 0.20287541 11.82984313 0.029161783 0.016435231 2.07E-08 7.68355825 0.110839028 QGSPDQVS(ph)PVSEMTSTSLYQDK ddPTM_A459_MK2206_30min_R1 2 QGSPDQVSPVSEMTSTSLYQDK 22 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.024)PDQVS(0.955)PVS(0.021)EMTSTSLYQDK;QGS(0.002)PDQVS(0.998)PVSEMTSTSLYQDK 83.559 0.00064958 32137700 7549.8 8728.6 8562.4 6391.6 7178.4 8596.3 8699.9 7093.8 8797.1 8863.7 TRUE FALSE 6907.649864 8160.366554 7981.208144 6883.882139 6892.469127 9083.015077 8119.545545 7031.779654 9711.590026 9961.802074 0.693413683 0.819165698 0.80118116 0.691027797 0.691889788 0.911784335 0.815067945 0.705874259 0.974882853 1 13.28219103 -8.27636578 21.69588055 0.987442004 0.770611038 0.618625631 0.069422369 109.5231813 159185.6798 0.06742337 0.017853191 5.29E-09 8.27636578 -0.216830966 QGSPDQVS(ph)PVSEMTSTSLYQDKQEGK ddPTM_A459_MK2206_30min_R1 3 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.062)PDQVS(0.938)PVSEMTSTSLYQDKQEGK;QGS(0.188)PDQVS(0.612)PVS(0.157)EMT(0.041)S(0.002)T(0.001)SLYQDKQEGK;QGS(0.031)PDQVS(0.764)PVS(0.143)EMT(0.058)S(0.003)T(0.001)SLYQDKQEGK 188.86 8.12E-28 60436500 5393.31 6564.87 6306.76 6497.13 5660.01 3443.27 4079.97 5621.87 3762.39 2794.46 TRUE FALSE 4934.580663 6137.49577 5878.674703 6997.540078 5434.559816 3638.224972 3807.802646 5572.718583 4153.503904 3140.658802 1.571192853 1.954206476 1.871796675 2.228048483 1.730388482 1.158427324 1.212421624 1.77437886 1.322494472 1 11.6168515 -6.59497133 5.447688609 1.340507874 1.91588351 0.594932234 0.239926373 0.153223098 8.236343568 0.080983837 0.081186115 2.54E-07 6.59497133 0.575375636 QGSPDQVS(ph)PVSEMTSTSLYQDKQEGK ddPTM_A459_MK2206_30min_R2 3 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.002)PDQVS(0.944)PVS(0.041)EMT(0.009)S(0.002)T(0.001)SLYQDKQEGK;QGS(0.034)PDQVS(0.642)PVS(0.222)EMT(0.063)S(0.027)T(0.008)S(0.003)LY(0.001)QDKQEGK;QGS(0.407)PDQVS(0.427)PVS(0.165)EMTSTSLYQDKQEGK 113.08 6.87E-09 46716500 53930 142381 106326 128909 170736 117108 140394 89484 143000 94110 TRUE FALSE 58058.92227 135310.5666 109870.8558 118376.7223 164032.0468 121564.627 121960.0992 101179.866 155437.8815 91039.19841 0.637735429 1.486289082 1.206852188 1.300283003 1.801773847 1.335299839 1.339643816 1.111387928 1.707373134 1 16.47420023 -4.756088089 24.99905589 1.373810928 0.637734273 0.463193579 0.234861658 148.4440093 693395.6167 0.056090991 0.468210582 1.75E-05 4.756088089 -0.736076655 QGSPDQVSPVS(ph)EMTSTSLYQDKQEGK ddPTM_A459_MK2206_30min_R1 1 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGSPDQVS(0.06)PVS(0.927)EMT(0.013)STSLYQDKQEGK 115.84 4.28E-09 45244000 5662.7 6203.6 6323.8 6269 5825.2 5223.8 4540.4 7269.6 3213.9 1878 TRUE FALSE 5181.057629 5799.744512 5894.558075 6751.839466 5593.169949 5519.567042 4237.5182 7206.042654 3547.996406 2110.660818 2.454708774 2.747833504 2.792754773 3.198922067 2.64996152 2.615089546 2.007673693 3.414116845 1.680988426 1 11.04347904 -8.48632099 5.273817375 1.002688547 2.718146738 0.716748995 0.363038098 0.082718421 6.079228388 0.341335598 0.088695905 3.26E-09 8.48632099 1.715458191 QGSPDQVSPVS(ph)EMTSTSLYQDKQEGK ddPTM_A459_MK2206_30min_R2 2 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.002)PDQVS(0.416)PVS(0.477)EMT(0.097)S(0.006)T(0.002)S(0.001)LYQDKQEGK;QGS(0.001)PDQVS(0.271)PVS(0.3)EMT(0.228)S(0.061)T(0.061)S(0.061)LY(0.016)QDKQEGK 79.236 8.48E-05 23720400 29485.6 55917.1 45142.1 48764.9 70853 53597.1 57011.6 33939.3 59865 37953.6 TRUE FALSE 31743.04021 53140.33813 46647.11508 44780.65168 68070.95521 55636.7752 49525.90844 38375.28304 65071.94949 36715.17714 0.864575434 1.447367064 1.270513142 1.219676852 1.854027694 1.515361753 1.348921953 1.045215794 1.772344697 1 15.16408894 -4.758069513 24.95878718 1.396062647 0.864574677 0.259006212 0.264053146 129.4615965 958696.1918 0.064202141 0.451930464 1.75E-05 4.758069513 -0.53148797 QGSPDQVSPVSEMT(ph)STSLYQDKQEGK ddPTM_A459_MK2206_30min_R1 2 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.055)PDQVS(0.123)PVS(0.293)EMT(0.499)S(0.029)T(0.002)SLYQDKQEGK;QGS(0.003)PDQVS(0.252)PVS(0.063)EMT(0.5)S(0.087)T(0.087)S(0.004)LY(0.005)QDKQEGK 125.37 1.17E-08 14051300 2271.24 3072.81 3275.7 2940.4 2256.8 1570.75 1599.85 2377.8 2312.91 1373.28 TRUE FALSE 2078.059111 2872.76951 3053.354611 3166.870117 2166.906877 1659.684508 1493.126926 2357.011145 2553.345271 1543.412294 1.346405701 1.861310501 1.978314299 2.0518627 1.403971502 1.075334513 0.967419355 1.527142912 1.65435074 1 10.59190779 -6.427738989 5.403758851 1.258100751 1.821949087 0.497338058 0.268428546 0.205931747 9.222818367 0.089832385 0.101446246 3.73E-07 6.427738989 0.563848336 QGSPDQVSPVSEMT(ph)STSLYQDKQEGK ddPTM_A459_MK2206_30min_R2 3 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.017)PDQVS(0.063)PVS(0.219)EMT(0.33)S(0.33)T(0.029)S(0.011)LY(0.001)QDKQEGK;QGS(0.004)PDQVS(0.017)PVS(0.079)EMT(0.382)S(0.382)T(0.111)S(0.024)LYQDKQEGK;QGS(0.227)PDQVS(0.146)PVS(0.102)EMT(0.486)S(0.036)T(0.003)SLYQDKQEGK 111.25 2.82E-08 24290800 54831.8 145331 110608 122520 165155 97824 144141 85066 146943 102736 TRUE FALSE 59029.76477 138114.0739 114295.6155 112509.7241 158670.1849 101546.7609 125215.1136 96184.41828 159723.8365 99383.73273 0.593958016 1.389705036 1.150043497 1.132073841 1.596540807 1.021764408 1.259915583 0.96780847 1.607142659 1 16.60072211 -4.752847553 24.9985378 1.2344728 0.59395681 0.43415327 0.219924226 299.8185728 872278.0671 0.050812613 0.581509774 1.77E-05 4.752847553 -0.64051599 QGSPDQVSPVSEMTS(ph)TSLYQDKQEGK ddPTM_A459_MK2206_30min_R1 1 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGSPDQVS(0.012)PVS(0.161)EMT(0.161)S(0.28)T(0.28)S(0.102)LY(0.005)QDKQEGK 59.561 0.012174 4869500 392.81 728.32 537.93 611.23 510.97 412.27 489.3 501.32 533.24 485.75 TRUE FALSE 359.3994468 680.9062356 501.4168104 658.3070405 490.6169829 435.6123711 456.6596898 496.9370121 588.6722062 545.9283772 0.658327103 1.247244628 0.918466288 1.20584873 0.89868379 0.797929526 0.836482786 0.910260453 1.078295672 1 9.09256788 QGSPDQVSPVSEMTS(ph)TSLYQDKQEGK ddPTM_A459_MK2206_30min_R2 1 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGSPDQVS(0.027)PVS(0.124)EMT(0.231)S(0.334)T(0.218)S(0.054)LY(0.012)QDKQEGK 90.1 0.0062691 0 6692.8 15142 10018 14120 19813 12495 13044 9022.7 15315 9594.3 TRUE FALSE 7205.205914 14390.0703 10351.99512 12966.35083 19035.04207 12970.50598 11331.30713 10201.99787 16647.07102 9281.238777 0.776319421 1.55044716 1.115367826 1.39704959 2.050916104 1.397497284 1.220883053 1.099206487 1.793625982 1 13.18010166 -5.849695497 6.338664207 1.446083945 1.188879898 0.115155822 0.341499332 0.504646618 29.44198132 0.097249916 0.146074943 1.41E-06 5.849695497 -0.257204047 QGSPGS(ph)VSK ddPTM_A459_MK2206_30min_R1 1 QGSPGSVSK 9 0 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 1 QGS(0.113)PGS(0.885)VS(0.002)K 84.821 0.035989 35176000 13399 10337 7578.1 9191.3 4293.8 4489.8 9979.5 13332 0 5157.4 TRUE FALSE 12259.34469 9664.059421 7063.719686 9899.215519 4122.768854 4744.008596 9313.785764 13215.43973 0 5796.337648 2.115015624 1.667269922 1.21865221 1.707839694 0.711271341 0.818449318 1.606839754 2.279963751 0 1 12.50092592 -4.458425964 0.929271191 1.18373394 3.192931211 0.218418874 0.585324982 6.009978203 2.734207669 0.197617288 14.05473825 3.48E-05 4.458425964 2.009197271 QGSPVAAGAPAK ddPTM_A459_MK2206_30min_R2 1 QGSPVAAGAPAK 12 0 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 0 138.76 0.039407 0 47560 52917 54970 54774 55397 39955 57644 47774 42994 59612 FALSE TRUE 51201.23017 50289.21873 56802.67236 50298.78899 53221.83543 41475.51552 50075.27356 54018.22583 46733.5404 57666.86532 0.887879545 0.872064373 0.985014047 0.87223033 0.922918822 0.719226115 0.868354354 0.936729013 0.810405423 1 15.81545498 -4.276541034 16.11083976 0.883095405 45.60473023 0 0.078173251 3378.217486 220807.807 0.018631651 3460.408107 5.29E-05 4.276541034 44.72163482 QGSVVS(ph)SR ddPTM_A459_MK2206_30min_R2 1 QGSVVSSR 8 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 QGS(0.324)VVS(0.676)SR 84.817 0.036143 18624000 39592 39768 41737 39054 44727 32165 42327 38488 44750 36771 TRUE FALSE 42623.19396 37793.17895 43128.49075 35863.16327 42970.79324 33389.06161 36769.41406 43518.51375 48642.27411 35571.16528 1.19825127 1.06246671 1.212456505 1.00820884 1.208023209 0.938655266 1.033685958 1.223421089 1.367463611 1 15.11842062 -7.778407618 24.536761 1.221581879 1.09288669 0.122669354 0.120177463 331.1159228 478798.7897 0.062585298 0.030194951 1.67E-08 7.778407618 -0.128695189 QGVLTHGR ddPTM_A459_MK2206_30min_R1 1 QGVLTHGR 8 0 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 0 93.143 0.034389 3027400 9158.7 7655.4 6630.3 8016 4288.9 4895.2 9365.5 11350 0 5095.4 FALSE TRUE 8379.704471 7157.032069 6180.253709 8633.393709 4118.064031 5172.361994 8740.744583 11250.76815 0 5726.65662 1.463280414 1.249774963 1.079208012 1.507580126 0.71910441 0.903207986 1.526325946 1.964631179 0 1 12.48347738 -1.522878761 0.120702417 0.887038358 2.33129299 0.061974684 0.49735424 393.2194962 3.271633444 3.409519833 95.52800881 0.029999999 1.522878761 1.444254632 QGVLTHGR ddPTM_A459_MK2206_30min_R2 4 QGVLTHGR 8 0 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 0 ;;; 119.21 0.011224 18298870 83600.9 102629 97301.5 101552.5 106631.5 97786.9 101049.7 85340.3 106325.6 109055.7 FALSE TRUE 90001.44918 97532.5931 100545.4834 93255.3359 102444.6115 101508.249 87781.75301 96494.57023 115573.6085 105497.2214 0.853116774 0.924503904 0.953062859 0.883960114 0.971064547 0.962188839 0.832076445 0.914664566 1.095513293 1 16.68684548 -8.247892291 24.42072993 1.047756639 0.913692353 0.561255804 0.048049255 362.8245877 654051.4869 0.032725954 0.012206409 5.65E-09 8.247892291 -0.134064286 QGVSYSVHAYTGQPS(ph)PR ddPTM_A459_MK2206_30min_R2 1 QGVSYSVHAYTGQPSPR 17 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 QGVSYSVHAYTGQPS(1)PR 140.27 0.00050433 7398100 3895.3 7922.7 5319.7 7909.6 7143.1 7816.5 7773.6 5500.6 8315.3 5296.1 TRUE FALSE 4193.527163 7529.270239 5497.056143 7263.360378 6862.626003 8113.962385 6752.916982 6219.547306 9038.549763 5123.288691 0.818522519 1.469616626 1.072954595 1.417714444 1.339496253 1.583741006 1.318082464 1.21397557 1.76420856 1 12.32285447 -4.754181761 24.86854112 1.358916659 0.818521504 0.356469178 0.215445408 255.9090487 876803.2901 0.050224236 0.499975327 1.76E-05 4.754181761 -0.540395155 QGYACPYYHNS(ph)KDR ddPTM_A459_MK2206_30min_R2 1 QGYACPYYHNSKDR 14 1 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 1 QGYACPY(0.042)Y(0.035)HNS(0.923)KDR 62.709 0.034678 3667500 24140 24894 25700 19274 17693 18267 19300 20271 18218 24121 TRUE FALSE 25988.17696 23657.80016 26556.82517 17699.25255 16998.28392 18962.16349 16765.88682 22920.4893 19802.56871 23333.93375 1.113750354 1.013879632 1.138120364 0.758519877 0.728479137 0.812643238 0.718519518 0.982281408 0.848659678 1 14.51014192 -5.760216815 24.99999974 0.824551318 1.081113102 0.596988788 0.094895849 21.79977441 445757.748 0.026388695 0.042657412 1.74E-06 5.760216815 0.256561784 QHEAPSNRPLNELLTPQGPS(ph)PR ddPTM_A459_MK2206_30min_R2 4 QHEAPSNRPLNELLTPQGPSPR 22 1 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 1 QHEAPSNRPLNELLT(0.043)PQGPS(0.957)PR;QHEAPSNRPLNELLTPQGPS(1)PR;QHEAPS(0.001)NRPLNELLT(0.088)PQGPS(0.912)PR;QHEAPS(0.006)NRPLNELLT(0.023)PQGPS(0.971)PR 119.52 1.81E-05 27192200 57263.7 63422.3 60758.1 70329.7 70993.4 65881 73992.6 49546.7 51504.8 62260.9 TRUE FALSE 61647.8529 60272.84081 62783.74473 64583.53854 68205.8424 68388.14762 64277.28274 56022.62381 55984.5944 60229.33193 1.023551996 1.000722387 1.042411442 1.072293789 1.132435646 1.135462497 1.067208961 0.930155159 0.929523749 1 15.87817864 -7.755826639 24.88489085 0.947379578 1.069445628 0.587006487 0.04391294 94.3933104 418512.0082 0.024461689 0.013612215 1.75E-08 7.755826639 0.12206605 QHEEFDLS(ph)PDQWR ddPTM_A459_MK2206_30min_R1 1 QHEEFDLSPDQWR 13 0 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 QHEEFDLS(1)PDQWR 94.339 0.015911 2229000 292.85 194.9 247.94 186.86 125.55 134.88 209.28 235.72 330.98 312.47 TRUE FALSE 267.9415697 182.2119746 231.1105236 201.2519896 120.5490776 142.516789 195.3193131 233.6591249 365.3865554 351.1811426 0.762972544 0.518854666 0.658094913 0.573071743 0.343267514 0.405821303 0.556178249 0.66535214 1.040450386 1 8.456071568 -8.147982494 2.931228265 1.030040827 0.538261884 0.735439269 0.111933935 0.144433273 2.222258954 0.101398386 0.031968088 7.11E-09 8.147982494 -0.491778943 QHEEFDLS(ph)PDQWR ddPTM_A459_MK2206_30min_R2 2 QHEEFDLSPDQWR 13 0 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 QHEEFDLS(1)PDQWR;QHEEFDLS(1)PDQWR 148.18 0.00055717 0 11428 14453 11527.6 13995.5 14668.7 12654.4 15445.1 10228.3 6867.5 14865.7 TRUE FALSE 12302.93647 13735.28504 11911.92443 12852.02288 14092.73313 13135.97206 13417.13982 11565.17393 7464.822736 14380.63343 0.855521179 0.955123786 0.828330997 0.893703532 0.979979999 0.91344878 0.933000614 0.804218673 0.519088591 1 13.8118396 -7.949836272 5.582139435 0.728648889 0.908089143 0.214234367 0.116268753 0.213425133 14.70150025 0.061960911 0.028496175 1.12E-08 7.949836272 0.179440254 QHEVEIPS(ph)PTQK ddPTM_A459_MK2206_30min_R1 4 QHEVEIPSPTQK 12 0 A0A1B0GW84;Q08499-11;Q08499-2;Q08499-10;A0A087WSZ7;Q08499;Q08499-3;Q08499-5;Q08499-8;D6RHE0;Q08499-6;Q08499-9;Q08499-4 A0A1B0GW84;Q08499-6;Q08499-9;Q08499-4 PDE4D "cAMP-specific 3,5-cyclic phosphodiesterase 4D" 1 QHEVEIPS(0.944)PT(0.056)QK;QHEVEIPS(0.958)PT(0.042)QK;QHEVEIPS(0.981)PT(0.019)QK;QHEVEIPS(0.992)PT(0.008)QK 217.39 1.47E-37 24976200 18428.7 18987.9 18420.1 14220 15531.7 15027 17982.9 14963.6 17360 17522.6 TRUE FALSE 16861.24229 17751.78426 17169.79493 15315.22686 14913.0395 15877.81575 16783.29355 14832.77482 19164.63412 19693.43198 0.856186078 0.901406331 0.871853873 0.777681964 0.757259553 0.8062493 0.85222797 0.753183845 0.973148517 1 14.26542693 -8.364618497 5.963851016 0.996013013 0.823403802 0.661616363 0.047152457 0.156159323 7.285680543 0.049691421 0.012913646 4.32E-09 8.364618497 -0.172609211 QHEVEIPS(ph)PTQK ddPTM_A459_MK2206_30min_R2 3 QHEVEIPSPTQK 12 0 A0A1B0GW84;Q08499-11;Q08499-2;Q08499-10;A0A087WSZ7;Q08499;Q08499-3;Q08499-5;Q08499-8;D6RHE0;Q08499-6;Q08499-9;Q08499-4 A0A1B0GW84;Q08499-6;Q08499-9;Q08499-4 PDE4D "cAMP-specific 3,5-cyclic phosphodiesterase 4D" 1 QHEVEIPS(1)PTQK;QHEVEIPS(0.998)PT(0.002)QK;QHEVEIPS(0.996)PT(0.004)QK 126.56 0.0023952 66452000 283946 339191 275638 315779 285665 233367 334382 244442 189073 322860 TRUE FALSE 305685.1241 322347.2682 284827.6333 289978.8456 274448.3567 242247.9447 290477.2417 276391.4087 205518.2278 312325.1046 0.978740164 1.032088882 0.911958818 0.928451928 0.878726534 0.775627515 0.930047689 0.884947782 0.658026603 1 18.25268901 -5.748915569 1.115459965 0.846562896 1.010499215 0.291509177 0.088342773 0.694945501 1.662898675 0.031811272 0.090535679 1.78E-06 5.748915569 0.163936319 QHFISFDTDR ddPTM_A459_MK2206_30min_R2 4 QHFISFDTDR 10 0 C9J0K6;P30626-3;P30626-2;P30626 C9J0K6 SRI Sorcin 0 ;;; 120.63 0.007065 14820900 24594.8 34386.2 34465.1 31459.4 32018.6 33843.4 31918.6 28303 35007.7 33073.5 FALSE TRUE 26477.7968 32678.63131 35614.14923 28889.06639 30761.38888 35131.3343 27727.64948 32002.29928 38052.60647 31994.3144 0.82757819 1.021388704 1.113139941 0.902943755 0.961464231 1.098049293 0.866643027 1.000249572 1.189355271 1 14.96552793 -8.024821344 24.04012002 1.094719313 0.976339288 0.20367841 0.096569256 752.5845385 728890.9871 0.062615186 0.02394545 9.44E-09 8.024821344 -0.118380025 QHFPATPLLDYALEVEK ddPTM_A459_MK2206_30min_R1 1 QHFPATPLLDYALEVEK 17 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 0 111.58 0.0028274 3023500 2609.8 2166.4 2837.3 2026.1 2590 2360.5 2227.1 2467.1 1831.6 1995.7 FALSE TRUE 2387.822805 2025.366966 2644.711981 2182.150573 2486.834816 2494.14947 2078.534223 2445.530405 2022.001374 2242.942383 1.064593912 0.902995539 1.179126134 0.972896402 1.108737716 1.111998903 0.926699784 1.090322437 0.901495014 1 11.13117685 -7.260234299 24.99571948 0.987156181 1.053854617 0.160231928 0.085624149 237.2034567 4920133.795 0.032656615 0.0238567 5.49E-08 7.260234299 0.066698436 QHLENDPGS(ph)NEDTDIPK ddPTM_A459_MK2206_30min_R1 1 QHLENDPGSNEDTDIPK 17 0 O43396;K7ER96;K7EML9 O43396 TXNL1 Thioredoxin-like protein 1 1 QHLENDPGS(0.999)NEDT(0.001)DIPK 106.19 0.0017037 5826300 4206.2 4405.5 4829.8 3975.1 3432.4 3421.6 4089.2 3984.6 4672.7 4334 TRUE FALSE 3848.440602 4118.701149 4501.966633 4281.262891 3295.68024 3615.328035 3816.416929 3949.763062 5158.443886 4870.92864 0.790083552 0.845567951 0.924252225 0.878941821 0.676602037 0.742225621 0.783509103 0.810885019 1.059026783 1 12.24998113 -8.255952214 23.99588583 1.029513413 0.806910013 0.642855792 0.066486893 162.6358905 711236.2447 0.054010275 0.019046318 5.55E-09 8.255952214 -0.2226034 QHLENDPGS(ph)NEDTDIPK ddPTM_A459_MK2206_30min_R2 1 QHLENDPGSNEDTDIPK 17 0 O43396;K7ER96;K7EML9 O43396 TXNL1 Thioredoxin-like protein 1 1 QHLENDPGS(0.93)NEDT(0.07)DIPK 119.66 0.0009901 7177000 40356 50940 40781 45033 44073 34974 55538 47277 30176 62673 TRUE FALSE 43445.68639 48410.39367 42140.61819 41353.65985 42342.47257 36304.96008 48245.79389 53456.26623 32800.65393 60627.98514 0.716594594 0.798482641 0.695068756 0.682088639 0.698398149 0.598815217 0.795767726 0.88170943 0.541015075 1 15.88769626 -10.8688135 3.677710251 1.001106739 0.716886801 0.461242715 0.093245482 134111075 181518130.3 1566340.518 0.022983302 1.35E-11 10.8688135 -0.284219938 QHYIDLK ddPTM_A459_MK2206_30min_R1 1 QHYIDLK 7 0 Q32Q12;P22392-2;J3KPD9;P22392;F6XY72;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 0 95.815 0.033084 17531000 8365.9 8264.4 9424.1 7942.3 8288.7 7461.7 8754.7 8679.5 8160 7592.8 FALSE TRUE 7654.336274 7726.386058 8784.418349 8554.017322 7958.543527 7884.175006 8170.689937 8603.616047 9008.261201 8533.453387 0.896979913 0.905423128 1.029409543 1.002409802 0.932628699 0.92391376 0.957489256 1.008222071 1.055640758 1 13.05891399 -7.826763869 3.578102523 1.02877224 0.951062819 0.400203515 0.040568716 0.262230611 6.644332655 0.026630946 0.012061561 1.49E-08 7.826763869 -0.077709421 QHYIDLK ddPTM_A459_MK2206_30min_R2 1 QHYIDLK 7 0 Q32Q12;P22392-2;J3KPD9;P22392;F6XY72;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 0 95.815 0.033084 22758000 484010 562980 535280 562440 552920 461500 559170 449470 453300 579510 FALSE TRUE 521066.1777 535023.2318 553125.968 516486.8528 531209.5826 479062.7059 485750.3073 508217.2723 492727.2146 560600.6362 0.929478392 0.954374999 0.986666679 0.921309787 0.947572208 0.854552555 0.866481905 0.906558501 0.87892732 1 19.09661386 -6.69608361 12.22094619 0.893299938 0.948968749 0.235092115 0.040724523 0.908061711 167.3200323 0.012842069 0.012838671 2.01E-07 6.69608361 0.055668811 QIANS(ph)QDGYVWQVTDMNR ddPTM_A459_MK2206_30min_R1 1 QIANSQDGYVWQVTDMNR 18 0 D6RDN1;D6RE09;P10155-2;P10155-3;P10155-5;P10155-4;P10155 D6RDN1 TROVE2 60 kDa SS-A/Ro ribonucleoprotein 1 QIANS(1)QDGYVWQVTDMNR 205.92 2.09E-11 4498800 850.68 903.48 1131.2 812.47 842.76 974.71 766 756.62 845.88 725.21 TRUE FALSE 778.3251989 844.6632878 1054.417296 875.0465802 809.1910846 1029.897238 714.9015376 750.0049511 933.812253 815.0544899 0.954936398 1.036327385 1.293677059 1.073605006 0.992806119 1.26359311 0.877121158 0.920189951 1.145705305 1 9.670752703 -7.279915941 24.98767947 0.979103282 1.101875053 0.184690896 0.119828001 1451.650984 1963202.974 0.050694982 0.034243341 5.25E-08 7.279915941 0.122771771 QIASNS(ph)PGSSPK ddPTM_A459_MK2206_30min_R1 2 QIASNSPGSSPK 12 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 QIAS(0.077)NS(0.922)PGS(0.002)SPK;QIAS(0.011)NS(0.989)PGSSPK 172.43 3.68E-08 4021700 3255.2 2904.9 2499.17 2573.44 3349.5 2694 2822 2975.2 2400.19 2356.29 TRUE FALSE 2978.328146 2715.790482 2329.533303 2771.646795 3216.082322 2846.531952 2633.749529 2949.18814 2649.69834 2648.204994 1.124659214 1.025521245 0.879665022 1.046613386 1.214438584 1.07489109 0.99454141 1.113655531 1.000563909 1 11.37079909 -4.753794204 24.55969304 1.04292111 1.124659398 0.086496328 0.082697988 684.4766114 2198614.918 0.02196684 0.227361521 1.76E-05 4.753794204 0.081738288 QIASNS(ph)PGSSPK ddPTM_A459_MK2206_30min_R2 2 QIASNSPGSSPK 12 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 QIAS(0.332)NS(0.668)PGSSPK;QIAS(0.227)NS(0.773)PGSSPK 184.87 0.00010447 9076500 44949 55227 48025 50644 50492 41354 53469 42086 44815 49221 TRUE FALSE 48390.33 52484.50749 49626.12953 46506.2232 48509.43038 42927.75545 46448.45607 47586.7847 48712.92769 47614.9228 1.016284962 1.102270137 1.042239 0.976715291 1.018786286 0.901560959 0.975502077 0.999409049 1.0230601 1 15.53912617 -5.672345335 4.306455495 0.982434344 1.062002795 0.415563143 0.03738514 0.194017917 6.539070237 0.010514532 0.018666055 2.13E-06 5.672345335 0.07956845 QICLVMLETLSQS(ph)PQGR ddPTM_A459_MK2206_30min_R1 12 QICLVMLETLSQSPQGR 17 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QICLVMLETLS(0.013)QS(0.987)PQGR;QICLVMLETLS(0.024)QS(0.976)PQGR;QICLVMLETLS(0.007)QS(0.992)PQGR;QICLVMLETLS(0.068)QS(0.932)PQGR;QICLVMLETLS(0.015)QS(0.985)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLET(0.086)LS(0.042)QS(0.872)PQGR;QICLVMLETLS(0.013)QS(0.987)PQGR;QICLVMLETLS(0.002)QS(0.998)PQGR;QICLVMLETLS(0.011)QS(0.989)PQGR;QICLVMLETLS(0.173)QS(0.827)PQGR;QICLVMLET(0.004)LS(0.364)QS(0.632)PQGR 267.22 1.29E-51 987804700 35392.77 33683.1 33408.01 26754.9 38578.7 36798.79 39846.1 32934.44 30595.77 27890.03 TRUE FALSE 32382.42906 31490.32407 31140.36736 28815.56703 37042.02869 38882.30569 37188.03937 32646.49766 33776.30978 31345.25748 1.033088629 1.004628024 0.993463441 0.919295911 1.181742684 1.240452586 1.186400826 1.041513144 1.077557261 1 14.93595956 -6.266513535 24.99709428 1.132568304 0.989251391 0.443079611 0.072743629 406.5034448 2002579.154 0.023849676 0.027877776 5.41E-07 6.266513535 -0.143316914 QICLVMLETLSQS(ph)PQGR ddPTM_A459_MK2206_30min_R2 10 QICLVMLETLSQSPQGR 17 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QICLVMLET(0.008)LS(0.062)QS(0.931)PQGR;QICLVMLET(0.001)LS(0.247)QS(0.752)PQGR;QICLVMLETLS(0.028)QS(0.972)PQGR;QICLVMLETLS(0.005)QS(0.995)PQGR;QICLVMLETLS(0.399)QS(0.601)PQGR;QICLVMLET(0.001)LS(0.019)QS(0.981)PQGR;QICLVMLET(0.001)LS(0.338)QS(0.662)PQGR;QICLVMLETLS(0.006)QS(0.994)PQGR;QICLVMLET(0.006)LS(0.038)QS(0.955)PQGR;QICLVMLETLSQS(1)PQGR 292.35 6.49E-76 636323400 531035.2 629056.1 590880.6 646297.9 633775.8 661568.5 660477 483547.1 587289.1 641877.4 TRUE FALSE 571691.6632 597818.0888 610580.2643 593493.2942 608890.5776 686744.9529 573755.5765 546748.3662 638370.4443 620932.993 0.920697836 0.962773915 0.98332714 0.955808921 0.980605934 1.105988827 0.924021727 0.880527162 1.028082662 1 19.24407807 -4.541478387 1.551124773 0.979893271 0.864309908 0.096934259 0.056768134 5.782167678 8.295215519 0.016622608 1.217015975 2.87E-05 4.541478387 -0.115583363 QICNMY(ph)T(ph)MYS(ph)MMNVGQTAEK ddPTM_A459_MK2206_30min_R2 1 QICNMYTMYSMMNVGQTAEK 20 0 Q96RE7 Q96RE7 NACC1 Nucleus accumbens-associated protein 1 3 QICNMY(0.996)T(0.993)MY(0.461)S(0.527)MMNVGQT(0.023)AEK 48.288 0.047339 0 14071 11195 14818 16702 14735 12899 15484 14221 9251.5 13399 TRUE FALSE 15148.28658 10639.07258 15312.02472 15337.39317 14156.42986 13389.88048 13450.9322 16079.73353 10056.17875 12961.79173 1.168687701 0.820802618 1.181320071 1.183277242 1.092166126 1.033026974 1.037737103 1.240548673 0.775832459 1 13.66197754 -8.268702887 24.9978363 0.887916243 1.087367656 0.312266775 0.122362045 760.9325982 2618763.854 0.106627641 0.029820332 5.39E-09 8.268702887 0.199451413 QICVVMLETLS(ph)QSPPK ddPTM_A459_MK2206_30min_R1 1 QICVVMLETLSQSPPK 16 0 H3BRU6;F8VZX2;Q15366;Q15366-2;Q15366-5;Q15366-8 H3BRU6;Q15366;Q15366-5 PCBP2 Poly(rC)-binding protein 2 1 QICVVMLET(0.01)LS(0.732)QS(0.258)PPK 108.18 0.012097 13488000 3139.7 3955.5 4391.1 3060.4 2014.6 2141.3 3434.5 3181 4649.8 5168.6 TRUE FALSE 2872.652028 3697.996231 4093.044366 3296.112538 1934.354216 2262.538556 3205.390772 3153.188852 5133.163349 5808.925189 0.494523846 0.636605932 0.704613028 0.567422102 0.332996923 0.389493492 0.55180445 0.542817948 0.883668352 1 12.50405553 -8.339058669 2.974979506 0.996469003 0.525162933 0.729917357 0.101978614 0.147727512 2.417277389 0.11036212 0.030300369 4.58E-09 8.339058669 -0.47130607 QICVVMLETLS(ph)QSPPK ddPTM_A459_MK2206_30min_R2 1 QICVVMLETLSQSPPK 16 0 H3BRU6;F8VZX2;Q15366;Q15366-2;Q15366-5;Q15366-8 H3BRU6;Q15366;Q15366-5 PCBP2 Poly(rC)-binding protein 2 1 QICVVMLET(0.052)LS(0.474)QS(0.474)PPK 106.35 0.046516 0 12434 11320 9677.2 10246 10326 7540.3 10431 10703 9673.1 14674 TRUE FALSE 13385.9566 10757.86526 9999.833018 9408.869025 9920.549356 7827.2514 9061.39717 12101.91885 10514.44875 14195.18858 0.942992516 0.75785293 0.704452284 0.662820995 0.698867035 0.55140172 0.638342852 0.852536673 0.740705112 1 13.79311439 -8.883379916 1.116394081 0.998252651 0.70999941 0.384905691 0.103559398 1.344816129 2.768208366 0.10504265 0.032687344 1.31E-09 8.883379916 -0.288253241 QICVVMLETLSQS(ph)PPK ddPTM_A459_MK2206_30min_R1 3 QICVVMLETLSQSPPK 16 0 H3BRU6;F8VZX2;Q15366;Q15366-2;Q15366-5;Q15366-8 H3BRU6;Q15366;Q15366-5 PCBP2 Poly(rC)-binding protein 2 1 QICVVMLETLS(0.001)QS(0.999)PPK;QICVVMLET(0.001)LS(0.012)QS(0.987)PPK;QICVVMLETLS(0.036)QS(0.964)PPK 165.24 1.55E-05 18822000 7313.4 8420.1 8476.6 6508.61 6483.44 5855.12 7844.4 7866.62 7921.7 9517.2 TRUE FALSE 6691.356926 7871.94996 7901.232009 7009.90427 6225.190856 6186.631835 7321.114389 7797.842971 8745.189063 10696.26259 0.625578969 0.73595332 0.738690916 0.655360152 0.581996824 0.578391918 0.684455372 0.729025013 0.817592967 1 13.38481917 -8.507629076 1.335871387 0.997697409 0.657208546 0.810697548 0.051807404 0.214216612 0.840370559 0.056393621 0.017143544 3.11E-09 8.507629076 -0.340488863 QICVVMLETLSQS(ph)PPK ddPTM_A459_MK2206_30min_R2 5 QICVVMLETLSQSPPK 16 0 H3BRU6;F8VZX2;Q15366;Q15366-2;Q15366-5;Q15366-8 H3BRU6;Q15366;Q15366-5 PCBP2 Poly(rC)-binding protein 2 1 QICVVMLETLS(0.035)QS(0.965)PPK;QICVVMLET(0.001)LS(0.014)QS(0.984)PPK;QICVVMLETLSQS(1)PPK;QICVVMLETLS(0.027)QS(0.973)PPK;QICVVMLETLSQS(1)PPK 265.93 4.37E-40 141294800 332904 260780 297328 202508 237872 175858 320720 242733 193781 316140 TRUE FALSE 358391.3862 247830.0444 307240.7671 185962.4486 228531.9501 182550.3994 278609.0787 274459.0365 210635.7211 305824.3777 1.17188626 0.810367199 1.004631382 0.608069409 0.747265315 0.596912518 0.911010041 0.897440023 0.688747322 1 18.22234388 -2.090549591 1.11748462 0.784698558 199.9980659 0.369605001 0.141206985 839.4571203 2.713694543 0.042236711 426619.3023 0.008118025 2.090549591 199.2133673 QIDS(ph)SPVGGETDETTVSQNYR ddPTM_A459_MK2206_30min_R1 1 QIDSSPVGGETDETTVSQNYR 21 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 QIDS(0.597)S(0.403)PVGGETDETTVSQNYR 77.838 0.0016699 5737300 1498.1 1394.1 1366.9 1221.7 1557.2 1425.6 1490.4 1522.8 1428 1319.9 TRUE FALSE 1370.678728 1303.343837 1274.118636 1315.795546 1495.173427 1506.31624 1390.978135 1509.48632 1576.44571 1483.419177 0.923999602 0.878607919 0.858906677 0.887001844 1.007923755 1.015435329 0.937683803 1.017572338 1.062710888 1 10.53471061 -6.259333214 19.51804608 1.004733562 0.884504321 0.767249134 0.032287936 4.464295335 41366.30231 0.01020009 0.012482275 5.50E-07 6.259333214 -0.120229241 QIDS(ph)SPVGGETDETTVSQNYR ddPTM_A459_MK2206_30min_R2 1 QIDSSPVGGETDETTVSQNYR 21 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 QIDS(0.724)S(0.276)PVGGETDETTVSQNYR 246.1 1.48E-32 83717000 23688 41970 30097 30177 35806 38088 40155 20697 28351 29316 TRUE FALSE 25501.57149 39885.83083 31100.41896 27711.44257 34400.07653 39537.46553 34882.60027 23402.16896 30816.91873 28359.42132 0.899227498 1.406440222 1.0966521 0.9771512 1.213003472 1.394156287 1.230018055 0.8251991 1.086655415 1 14.79154047 -7.745173371 24.9768147 0.966945404 1.182205785 0.246495286 0.162295202 310.6044518 476941.4593 0.076945118 0.044254454 1.80E-08 7.745173371 0.21526038 QIDSS(ph)PVGGETDETTVSQNYR ddPTM_A459_MK2206_30min_R1 1 QIDSSPVGGETDETTVSQNYR 21 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 QIDS(0.377)S(0.623)PVGGETDETTVSQNYR 88.433 0.00058411 5004100 1915.1 1504.5 1865.2 1509.8 1857.7 1778.2 2212.8 1950.1 1659.5 1612.7 TRUE FALSE 1752.210688 1406.556777 1738.595421 1626.085058 1783.703875 1878.880147 2065.188149 1933.050481 1832.010964 1812.493451 0.966740424 0.776034129 0.959228526 0.897153618 0.984116039 1.036627275 1.139418268 1.066514464 1.010768322 1 10.82376007 -6.478098539 1.848829531 1.062339447 0.890424716 0.578910291 0.060320454 0.228518298 1.565909712 0.022029974 0.024747535 3.33E-07 6.478098539 -0.171914731 QIDSS(ph)PVGGETDETTVSQNYR ddPTM_A459_MK2206_30min_R2 1 QIDSSPVGGETDETTVSQNYR 21 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 QIDS(0.121)S(0.879)PVGGETDETTVSQNYR 190.1 1.52E-16 84827000 124400 156680 137940 142390 140800 143870 141620 108820 148130 135410 TRUE FALSE 133924.1596 148899.499 142538.8508 130756.2815 135271.4845 149345.0737 123025.1239 123043.1476 161014.0796 130991.5828 1.022387521 1.136710435 1.088152748 0.998203692 1.032673105 1.140111986 0.939183429 0.939321024 1.229194092 1 16.99911458 -5.724821981 23.40875965 1.036972987 1.087846441 0.045886001 0.08731925 269.9145377 172546.6196 0.023353094 0.040446317 1.88E-06 5.724821981 0.050873454 QIFEDHVFCHS(ph)L ddPTM_A459_MK2206_30min_R1 3 QIFEDHVFCHSL 12 0 Q13137-5;Q13137-2;Q13137;Q13137-3;Q13137-4 Q13137-5 CALCOCO2 Calcium-binding and coiled-coil domain-containing protein 2 1 QIFEDHVFCHS(1)L;QIFEDHVFCHS(1)L;QIFEDHVFCHS(1)L 137.93 0.00084852 5059900 15675.1 5177.8 5824.9 5051.3 6636.7 6381.2 6190.3 6120.3 5439.5 4954.5 TRUE FALSE 14341.85043 4840.724279 5429.522017 5440.352001 6372.346186 6742.498029 5777.356382 6066.790862 6004.95549 5568.300865 2.575624195 0.869335978 0.975076985 0.97702192 1.144396889 1.210871717 1.037543862 1.08952282 1.07841793 1 12.44302145 -4.757320913 24.99999424 1.049406153 2.575626419 0.962101044 0.091278213 22.67021802 137594.7713 0.024730726 0.185531613 1.75E-05 4.757320913 1.526220266 QIFEDHVFCHS(ph)L ddPTM_A459_MK2206_30min_R2 1 QIFEDHVFCHSL 12 0 Q13137-5;Q13137-2;Q13137;Q13137-3;Q13137-4 Q13137-5 CALCOCO2 Calcium-binding and coiled-coil domain-containing protein 2 1 QIFEDHVFCHS(1)L 112.62 0.0041667 2370900 27471 13838 10799 13066 10187 17489 10754 10496 12755 10454 TRUE FALSE 29574.20088 13150.82504 11159.03327 11998.466 9787.007194 18154.55615 9341.986882 11867.86324 13864.40684 10112.88684 2.924407379 1.30040267 1.103446864 1.186453107 0.967775805 1.79519028 0.923770535 1.173538618 1.370964302 1 13.30390727 -4.761594051 5.201528004 1.200208466 3.023201446 0.826076261 0.237484799 0.061519294 4.718921886 0.05681726 0.408224154 1.73E-05 4.761594051 1.822992981 up QILIACS(ph)PVSSVR ddPTM_A459_MK2206_30min_R1 2 QILIACSPVSSVR 13 0 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 QILIACS(0.973)PVS(0.027)SVR;QILIACS(1)PVSSVR 199.33 0.00013464 285180000 10416.1 8578.2 8579.1 7498.5 9059.7 8331.4 8851 7497.9 7093.3 7534.6 TRUE FALSE 9530.155998 8019.757621 7996.774595 8076.035769 8698.832965 8803.116668 8260.56594 7432.346651 7830.673919 8468.043131 1.12542601 0.947061499 0.94434741 0.953707444 1.027254211 1.039569182 0.975498803 0.877693528 0.924732408 1 13.0478129 -7.538312015 19.77340064 0.926046447 0.999980663 0.227866625 0.058217866 30.46598769 39027.04666 0.027563388 0.015937363 2.90E-08 7.538312015 0.073934215 QILIACS(ph)PVSSVR ddPTM_A459_MK2206_30min_R2 4 QILIACSPVSSVR 13 0 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 QILIACS(0.995)PVS(0.004)S(0.001)VR;QILIACS(0.995)PVS(0.005)SVR;QILIACS(0.999)PVS(0.001)SVR;QILIACS(0.999)PVS(0.001)SVR 178.14 0.00010591 339686000 506680 473454 442179 557129 505224 533422 571871 381950 429655 528187 TRUE FALSE 545471.8104 449942.9628 456921.0272 511609.7785 485386.3672 553721.748 496783.6508 431872.1764 467025.6153 510952.3014 1.067559161 0.880596802 0.89425378 1.001286768 0.949964147 1.08370536 0.972270111 0.845229927 0.914029771 1 18.96282909 QIS(ph)LPDLSQEEPQLK ddPTM_A459_MK2206_30min_R2 1 QISLPDLSQEEPQLK 15 0 H0YBZ4;Q15390-2;Q15390 H0YBZ4 MTFR1 Mitochondrial fission regulator 1 1 QIS(0.99)LPDLS(0.01)QEEPQLK 167.14 5.45E-06 0 14334 18145 18428 17588 18780 17047 19170 16158 13473 18347 TRUE FALSE 15431.42206 17243.94569 19042.38032 16151.00414 18042.60284 17695.73553 16652.95597 18269.90608 14644.85719 17748.33889 0.869457258 0.971580822 1.072910566 0.910000887 1.016579802 0.997036153 0.93828251 1.029386817 0.825139596 1 14.11539639 -10.65864906 5.175481147 1.000001162 0.965497082 0.021265697 0.072114531 9.17E-07 1.53E-07 0.066246673 0.016066637 2.19E-11 10.65864906 -0.03450408 QIS(ph)QDVK ddPTM_A459_MK2206_30min_R2 1 QISQDVK 7 0 E9PIJ1;E9PJF6;A0A590UK85;A0A590UJY6;A0A5F9UK94;H0Y360;Q01433-3;Q01433-5;Q01433-2;Q01433-4;Q01433 E9PIJ1 AMPD2 AMP deaminase 2 1 QIS(1)QDVK 86.898 0.0343 29388000 316450 304200 219810 284770 277830 245760 335100 280560 274470 281270 TRUE FALSE 340677.6553 289093.8703 227138.3557 261503.3801 266920.9982 255112.569 291100.9675 317230.1553 298342.9045 272092.1829 1.252067044 1.062485027 0.834784569 0.961083767 0.980994733 0.937596098 1.069861561 1.165892206 1.096477309 1 18.05373598 -7.48150876 8.745353132 1.102283698 0.997125548 0.107609138 0.107362831 0.717184496 145.4430168 0.047848939 0.031812123 3.30E-08 7.48150876 -0.105158149 QISGQYSGS(ph)PQLLK ddPTM_A459_MK2206_30min_R2 1 QISGQYSGSPQLLK 14 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 QISGQYS(0.231)GS(0.769)PQLLK 165.24 0.0002545 6970400 27134 25194 26162 28136 24192 23752 34858 26431 27731 29205 TRUE FALSE 29211.3999 23942.9026 27034.22802 25837.1988 23242.10052 24655.899 30281.10273 29885.62245 30142.99225 28252.04324 1.033957072 0.84747508 0.956894614 0.914524963 0.822669721 0.872712065 1.07181992 1.057821631 1.066931407 1 14.78606759 -7.264542437 24.97265897 1.053961715 0.903921131 0.583257024 0.058312803 183.4795877 1476588.624 0.023496837 0.016585681 5.44E-08 7.264542437 -0.150040584 QISLPDLS(ph)QEEPQLK ddPTM_A459_MK2206_30min_R2 1 QISLPDLSQEEPQLK 15 0 H0YBZ4;Q15390-2;Q15390 H0YBZ4 MTFR1 Mitochondrial fission regulator 1 1 QIS(0.299)LPDLS(0.701)QEEPQLK 87.447 0.018648 2890400 15791 22849 19726 23096 18010 17812 20590 19474 16885 22532 TRUE FALSE 16999.9711 21714.35189 20383.65499 21208.98292 17302.83691 18489.84814 17886.50827 22019.31866 18353.62678 21796.78269 0.779930293 0.996218213 0.935168061 0.973032728 0.79382527 0.848283364 0.820603138 1.010209579 0.842033755 1 14.41182758 -11.59078412 5.354022894 1.24624401 0.89338981 0.143914534 0.08066291 0.077427164 0.000982014 0.025505388 0.01882798 2.57E-12 11.59078412 -0.352854199 QIT(ph)MEELVR ddPTM_A459_MK2206_30min_R1 2 QITMEELVR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 QIT(1)MEELVR;QIT(1)MEELVR 108.72 0.027709 14343600 2683.6 2952.7 2370.1 2363.2 2485.2 2828.7 2150.55 2092.42 2472.35 2530.23 TRUE FALSE 2455.345728 2760.478693 2209.224215 2545.214073 2386.209222 2988.858549 2007.090733 2074.126193 2729.35963 2843.693995 0.863435283 0.9707369 0.776885354 0.895037961 0.839123065 1.051047882 0.705804048 0.729377421 0.959793717 1 11.47355051 -7.282334497 24.99470488 0.826191949 0.894117422 0.031854869 0.109605055 2287.77744 2736624.403 0.044675254 0.030155299 5.22E-08 7.282334497 0.067925472 QIT(ph)MEELVR ddPTM_A459_MK2206_30min_R2 1 QITMEELVR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 QIT(1)MEELVR 117.86 0.017301 12300000 9904.7 11191 10137 11027 8635 10680 9665.1 7631.6 14688 6949.9 TRUE FALSE 10663.01145 10635.27121 10474.96252 10126.05883 8295.946513 11086.43488 8396.06076 8629.076323 15965.53569 6723.125332 1.586020031 1.581893939 1.558049568 1.506153511 1.233941969 1.64900018 1.248832997 1.283491813 2.374719331 1 12.71491633 -5.797555683 4.082017474 1.469467745 1.578031301 0.019342222 0.348087502 1.229546218 44.00717597 0.09650319 0.155964519 1.59E-06 5.797555683 0.108563556 QIT(ph)SPVSGINGDIR ddPTM_A459_MK2206_30min_R1 2 QITSPVSGINGDIR 14 0 A0A087WXV4;P41235-7;P41235-3;P41235-6;P41235-5;P41235-2;P41235;P41235-4 A0A087WXV4 HNF4A Hepatocyte nuclear factor 4-alpha 1 QIT(0.878)S(0.122)PVSGINGDIR;QIT(0.499)S(0.499)PVS(0.002)GINGDIR 153.41 0.00085087 42802000 9057 8327.7 8442.6 6871.6 9215 7550.4 10125.3 8797.8 8313.3 8419.8 TRUE FALSE 8286.65459 7785.565216 7869.539834 7400.851823 8847.947037 7977.897123 9449.859712 8720.881762 9177.497284 9462.90839 0.87569849 0.822745492 0.831619573 0.782090613 0.935013494 0.843070311 0.998621071 0.921585775 0.969838966 1 13.20806794 -6.992390614 1.089218327 0.972526462 0.831417177 0.640478631 0.044319776 0.316895364 0.774850308 0.025826096 0.018663547 1.02E-07 6.992390614 -0.141109284 QIT(ph)SPVSGINGDIR ddPTM_A459_MK2206_30min_R2 3 QITSPVSGINGDIR 14 0 A0A087WXV4;P41235-7;P41235-3;P41235-6;P41235-5;P41235-2;P41235;P41235-4 A0A087WXV4 HNF4A Hepatocyte nuclear factor 4-alpha 1 QIT(0.857)S(0.11)PVS(0.033)GINGDIR;QIT(0.491)S(0.491)PVS(0.017)GINGDIR;QIT(0.68)S(0.309)PVS(0.011)GINGDIR 178.47 0.00016733 103716100 291352 345293 279873 386346 287009 332445 315690 234036 238253 298206 TRUE FALSE 313658.1331 328146.2517 289203.8261 354780.2959 275739.5846 345096.4274 274239.5238 264625.3088 258975.8153 288475.5626 1.087295334 1.13751837 1.002524524 1.229845234 0.955850756 1.196276122 0.950650798 0.917323139 0.897739181 1 18.13808958 -7.38567263 6.905450399 0.93157776 1.097615675 0.488757875 0.080101856 0.201411591 10.47855743 0.031148674 0.020861589 4.11E-08 7.38567263 0.166037915 QITQEEDDS(ph)DEEVAPENFFSLPEK ddPTM_A459_MK2206_30min_R1 2 QITQEEDDSDEEVAPENFFSLPEK 24 0 Q92733 Q92733 PRCC Proline-rich protein PRCC 1 QIT(0.001)QEEDDS(0.999)DEEVAPENFFSLPEK;QIT(0.001)QEEDDS(0.999)DEEVAPENFFSLPEK 136.48 5.11E-08 8807000 8002.2 8221.3 8506.8 6663.8 7999.4 7530.6 9862.7 7823.4 7521.9 7084.1 TRUE FALSE 7321.570869 7686.091876 7929.382117 7177.047031 7680.766959 7956.976064 9204.777279 7755.000839 8303.828422 7961.73179 0.919595267 0.965379402 0.995936855 0.901442955 0.964710588 0.999402677 1.156127526 0.974034424 1.042967616 1 12.95886656 -6.898798094 3.907324573 1.045149631 0.950300325 0.42956125 0.05060278 0.216334031 6.216261642 0.018351952 0.016017878 1.26E-07 6.898798094 -0.094849306 QITQEEDDS(ph)DEEVAPENFFSLPEK ddPTM_A459_MK2206_30min_R2 1 QITQEEDDSDEEVAPENFFSLPEK 24 0 Q92733 Q92733 PRCC Proline-rich protein PRCC 1 QITQEEDDS(1)DEEVAPENFFSLPEK 83.09 0.00010507 1696400 15684 19110 21313 22135 22122 23395 22024 16348 16261 20586 TRUE FALSE 16884.7791 18161.02519 22023.56478 20326.49969 21253.37913 24285.31312 19132.22234 18484.73973 17675.35239 19914.28051 0.847872917 0.911959896 1.105918176 1.020699678 1.067243133 1.219492369 0.960728776 0.928215294 0.887571729 1 14.28151574 -12.39701141 2.068675308 0.881686036 1.00186363 0 0.107141732 14722706.46 14998229.13 8302898.262 0.028772023 4.01E-13 12.39701141 0.120177594 QITS(ph)PVSGINGDIR ddPTM_A459_MK2206_30min_R1 2 QITSPVSGINGDIR 14 0 A0A087WXV4;P41235-7;P41235-3;P41235-6;P41235-5;P41235-2;P41235;P41235-4 A0A087WXV4 HNF4A Hepatocyte nuclear factor 4-alpha 1 QIT(0.091)S(0.909)PVSGINGDIR;QIT(0.095)S(0.896)PVS(0.008)GINGDIR 229.02 3.15E-13 45793000 5975.4 5724.7 5091.7 4753.7 7113.3 5188.6 6458.8 4946.3 5144.5 5485.8 TRUE FALSE 5467.160852 5352.020989 4746.08959 5119.830798 6829.962198 5482.374048 6027.945237 4903.055021 5679.289185 6165.42232 0.886745557 0.86807046 0.769791483 0.830410397 1.107784973 0.88921306 0.97770192 0.795250474 0.921151689 1 12.589984 QITS(ph)PVSGINGDIR ddPTM_A459_MK2206_30min_R2 1 QITSPVSGINGDIR 14 0 A0A087WXV4;P41235-7;P41235-3;P41235-6;P41235-5;P41235-2;P41235;P41235-4 A0A087WXV4 HNF4A Hepatocyte nuclear factor 4-alpha 1 QIT(0.036)S(0.948)PVS(0.016)GINGDIR 153.41 0.00036383 8751200 30772 38141 31130 40119 30883 31380 37881 28959 26626 31572 TRUE FALSE 33127.92798 36246.9734 32167.85866 36841.14937 29670.37825 32574.18789 32907.1792 32744.04073 28941.88135 30541.80823 1.084674743 1.18679854 1.05324015 1.206253051 0.971467636 1.066544183 1.077446985 1.072105505 0.947615188 1 14.89849786 -6.834316879 0.426264404 0.990036737 1.147254279 0.343373736 0.063931969 1.513092311 0.581708224 0.062779657 0.093376729 1.46E-07 6.834316879 0.157217542 QITT(ph)SPITVR ddPTM_A459_MK2206_30min_R1 2 QITTSPITVR 10 0 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 QIT(0.023)T(0.488)S(0.488)PIT(0.001)VR;QIT(0.012)T(0.491)S(0.491)PIT(0.006)VR 132.03 0.0058692 44349000 7823.2 7943.4 7679.5 6634.7 8571 7794.3 9087 7483.7 6796.4 6561.9 TRUE FALSE 7157.795759 7426.283216 7158.236936 7145.705744 8229.598921 8235.60653 8480.82281 7418.2708 7502.910101 7374.837712 0.970569935 1.006975815 0.970629757 0.968930575 1.115902375 1.116716984 1.149967381 1.005889362 1.01736613 1 12.84839559 -6.250023963 24.92134127 1.074505021 0.98063741 0.437233964 0.048730267 699.1189967 1526268.038 0.015456491 0.019766132 5.62E-07 6.250023963 -0.093867612 QITTS(ph)PITVR ddPTM_A459_MK2206_30min_R1 1 QITTSPITVR 10 0 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 QIT(0.003)T(0.177)S(0.779)PIT(0.041)VR 80.312 0.047888 13751000 4434.9 4552.1 4679.4 3778.3 4875 4500.9 5214.6 4234.8 4045.8 3852.2 TRUE FALSE 4057.688466 4255.757463 4361.775366 4069.305321 4680.818427 4755.737068 4866.743549 4197.77559 4466.375388 4329.439619 0.937231795 0.982981133 1.007468807 0.939915019 1.081160344 1.09846481 1.124104729 0.969588667 1.031628982 1 12.07996459 -6.263591056 24.99940932 1.055350041 0.970945728 0.433866593 0.046703227 198.9602281 2311623.397 0.015125679 0.017990766 5.45E-07 6.263591056 -0.084404313 QITTS(ph)PITVR ddPTM_A459_MK2206_30min_R2 4 QITTSPITVR 10 0 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 QIT(0.01)T(0.083)S(0.7)PIT(0.207)VR;QIT(0.035)T(0.216)S(0.732)PIT(0.018)VR;QIT(0.004)T(0.1)S(0.866)PIT(0.03)VR;QIT(0.009)T(0.103)S(0.884)PIT(0.004)VR 133.88 0.0021965 113767400 191741 232508 222528 221785 232157 231680 240306 191264 226849 202394 TRUE FALSE 206420.8384 220961.9908 229946.9725 203664.456 223041.3497 240496.7447 208753.5335 216262.8615 246579.916 195789.9004 1.054297683 1.128566849 1.174457784 1.040219417 1.139187207 1.228340912 1.066211961 1.104565972 1.259410805 1 17.57894682 -4.762498983 7.26711642 1.130587569 1.052919932 0.07326269 0.076282971 0.27722382 95.43847601 0.01811134 0.106806001 1.73E-05 4.762498983 -0.077667637 QIVGT(ph)PVNSEDSDTR ddPTM_A459_MK2206_30min_R2 1 QIVGTPVNSEDSDTR 15 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 QIVGT(0.674)PVNS(0.239)EDS(0.057)DT(0.03)R 142.55 0.00089089 18079000 43100 50125 35755 53864 44671 46914 48095 38929 39035 42964 TRUE FALSE 46399.76914 47635.86539 36947.05385 49463.1389 42916.99209 48699.34514 41780.06873 44017.15396 42430.19374 41562.0882 1.116396484 1.14613744 0.88896048 1.190102351 1.032599514 1.171725177 1.005244696 1.059069837 1.020886957 1 15.34298052 QIVGTPVNS(ph)EDSDTR ddPTM_A459_MK2206_30min_R2 1 QIVGTPVNSEDSDTR 15 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 QIVGT(0.024)PVNS(0.431)EDS(0.319)DT(0.226)R 95.755 0.010614 8142300 22355 26028 25594 29164 30772 33487 28290 19943 27593 25898 TRUE FALSE 24066.51599 24735.48737 26447.29119 26781.20791 29563.73666 34761.37125 24575.48902 22549.61857 29992.98926 25052.95038 0.960626019 0.987328318 1.055655752 1.068984192 1.180050102 1.38751607 0.980941911 0.900078363 1.197183917 1 14.61269289 -1.636068497 18.29546162 1.075434684 0.027162768 0 0.137807019 0 0 0.033325034 0 0.023117002 1.636068497 -1.048271917 QIY(ph)Y(ph)SMNVEVTDK ddPTM_A459_MK2206_30min_R1 1 QIYYSMNVEVTDK 13 0 A0A0K0K1C4 A0A0K0K1C4 2 QIY(0.759)Y(0.759)S(0.482)MNVEVTDK 88.134 0.025614 8472100 2859.5 1244.3 1281 2634.8 1365.7 2861.7 1580.4 1409.4 1230.2 1177.7 TRUE FALSE 2616.284509 1163.295844 1194.049289 2837.732753 1311.301277 3023.726981 1474.9744 1397.077764 1358.083692 1323.602367 1.97663934 0.878886192 0.902120847 2.143946568 0.990706355 2.284467795 1.114363676 1.055511685 1.026051121 1 10.37025406 -7.494185325 24.95493147 1.041456009 1.49353303 0.195815523 0.475873357 1238.435658 1077082.21 0.196872264 0.132429673 3.20E-08 7.494185325 0.452077021 QKDFLDGVYAFEYYPST(ph)PGR ddPTM_A459_MK2206_30min_R1 2 QKDFLDGVYAFEYYPSTPGR 20 1 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 1 QKDFLDGVYAFEYYPS(0.041)T(0.959)PGR;QKDFLDGVYAFEYYPS(0.064)T(0.936)PGR 205.72 2.10E-16 102011000 17410.9 16599 17398.3 15209 19104.2 16703.2 18937.5 18103.2 15470.6 12860.6 TRUE FALSE 15930.01153 15518.40208 16217.35187 16380.39982 18343.23926 17648.92075 17674.21393 17944.92563 17078.82423 14453.86822 1.102127907 1.073650447 1.12200773 1.133288305 1.269088591 1.221051727 1.222801651 1.241531011 1.181609239 1 13.81916803 -6.045063216 5.013928357 1.204946887 1.10048561 0.234799519 0.070601337 0.233312219 13.68772634 0.019617435 0.026482405 9.01E-07 6.045063216 -0.104461277 QKDFLDGVYAFEYYPST(ph)PGR ddPTM_A459_MK2206_30min_R2 2 QKDFLDGVYAFEYYPSTPGR 20 1 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 1 QKDFLDGVYAFEYYPS(0.05)T(0.95)PGR;QKDFLDGVYAFEYYPS(0.067)T(0.933)PGR 187.56 1.81E-15 14235500 122263 159639 143591 155656 157135 147045 154441 119794 151106 133773 TRUE FALSE 131623.5493 151711.5594 148378.2523 142938.4069 150965.0904 152640.9005 134162.7112 135451.4871 164248.9267 129407.998 1.017120668 1.172350719 1.146592596 1.104556203 1.166582381 1.1795322 1.036742035 1.046701048 1.269233195 1 16.98156726 -10.30776017 7.641193181 1.000000044 1.125626179 0.210176429 0.073604331 1.00E-10 0 0.06918716 0.016780351 4.92E-11 10.30776017 0.125626135 QKEDVEVVGGS(ph)DGEGAIGLSSDPK ddPTM_A459_MK2206_30min_R1 2 QKEDVEVVGGSDGEGAIGLSSDPK 24 1 Q8NHZ8 Q8NHZ8 CDC26 Anaphase-promoting complex subunit CDC26 1 QKEDVEVVGGS(0.997)DGEGAIGLS(0.001)S(0.002)DPK;QKEDVEVVGGS(0.566)DGEGAIGLS(0.193)S(0.241)DPK 97.366 5.03E-06 106783000 6521 6565.5 7282.9 5760.9 5403.3 5481.1 5747.7 6266.9 6193.4 5462 TRUE FALSE 5966.354707 6138.084757 6788.557039 6204.605516 5188.075119 5791.435145 5364.28142 6212.109154 6837.226093 6138.673796 0.971928939 0.999904045 1.105867043 1.010740385 0.845145921 0.943434256 0.873850216 1.01196274 1.113795312 1 12.58371129 -8.000300978 24.99969385 1.058891462 0.965839892 0.208760753 0.072687609 16.75431543 1391539.359 0.044254742 0.020883379 9.99E-09 8.000300978 -0.09305157 QKEDVEVVGGS(ph)DGEGAIGLSSDPK ddPTM_A459_MK2206_30min_R2 4 QKEDVEVVGGSDGEGAIGLSSDPK 24 1 Q8NHZ8 Q8NHZ8 CDC26 Anaphase-promoting complex subunit CDC26 1 QKEDVEVVGGS(1)DGEGAIGLSSDPK;QKEDVEVVGGS(0.825)DGEGAIGLS(0.074)S(0.101)DPK;QKEDVEVVGGS(1)DGEGAIGLSSDPK;QKEDVEVVGGS(0.985)DGEGAIGLS(0.007)S(0.008)DPK 127.44 7.33E-08 116104000 750570 780000 802650 760750 774410 572509 866650 664400 567546 881700 TRUE FALSE 808034.2163 741266.3342 829409.9504 698594.2915 744002.7723 594296.2312 752857.814 751239.3612 616910.1252 852930.2012 0.947362651 0.869082058 0.972424179 0.819052122 0.872290337 0.696770064 0.882672243 0.880774722 0.723283247 1 19.70206816 -5.776043484 24.85431465 0.831543134 0.923568875 0.189592376 0.084283927 330.3923787 562284.8542 0.022596746 0.033682153 1.67E-06 5.776043484 0.092025741 QKEENNTDLPYLEESTLTTAALS(ph)PSK ddPTM_A459_MK2206_30min_R1 3 QKEENNTDLPYLEESTLTTAALSPSK 26 1 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 QKEENNTDLPYLEESTLT(0.002)T(0.002)AALS(0.958)PS(0.039)K;QKEENNTDLPYLEESTLT(0.007)T(0.024)AALS(0.965)PS(0.004)K;QKEENNTDLPYLEES(0.001)T(0.001)LT(0.002)T(0.013)AALS(0.725)PS(0.26)K 158.8 3.22E-14 20983500 4550.3 5560.85 5256.81 5457.19 4108.85 3739.51 4550.48 5308.26 5723.96 5602.5 TRUE FALSE 4163.27309 5198.837654 4899.992384 5877.503719 3945.185804 3951.237825 4246.925782 5261.850442 6318.986125 6296.579997 0.661195934 0.825660542 0.77819902 0.933443825 0.626560102 0.627521262 0.674481351 0.835668005 1.00355846 1 12.62035272 -8.113405284 3.216629138 1.003292772 0.737789263 0.577522213 0.091087498 0.205599979 3.798643426 0.079063791 0.026121953 7.70E-09 8.113405284 -0.265503509 QKEENNTDLPYLEESTLTTAALS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 QKEENNTDLPYLEESTLTTAALSPSK 26 1 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 QKEENNTDLPYLEESTLT(0.042)T(0.059)AALS(0.869)PS(0.03)K 121.24 4.24E-09 10773000 64101 50022 54166 42923 44960 40404 61957 43811 47563 60158 TRUE FALSE 69008.62185 47537.98022 55971.86741 39416.0536 43194.64449 41941.60253 53821.97148 49537.24813 51699.94377 58195.04939 1.18581602 0.816873269 0.961797747 0.677309393 0.742239159 0.720707396 0.924854812 0.851227873 0.888390753 1 15.82860881 -4.121744017 1.781982496 0.827744507 3.057015365 0.48717662 0.102994037 7.394666868 4.195107439 0.02807774 49.81920743 7.56E-05 4.121744017 2.229270858 QKFNDS(ph)EGDDTEETEDYR ddPTM_A459_MK2206_30min_R1 2 QKFNDSEGDDTEETEDYR 18 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 QKFNDS(0.94)EGDDT(0.011)EET(0.049)EDYR;QKFNDS(0.671)EGDDT(0.104)EET(0.225)EDYR 66.906 0.016787 58527000 12341.7 12382.4 13778.6 12467.9 12545.6 11671.5 14142.3 12372 11831.6 10762.4 TRUE FALSE 11291.97361 11576.30351 12843.34702 13428.17982 12045.88219 12332.33024 13198.89297 12263.83291 13061.53716 12095.72736 0.933550606 0.957057245 1.061808574 1.110158936 0.995879109 1.019560864 1.091202916 1.013897928 1.079847186 1 13.56220991 -5.1944148 4.892634546 1.048125445 0.940915682 0.539230551 0.037540909 0.156579221 7.32995775 0.009541475 0.026687437 6.39E-06 5.1944148 -0.107209763 QKFNDS(ph)EGDDTEETEDYR ddPTM_A459_MK2206_30min_R2 4 QKFNDSEGDDTEETEDYR 18 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 QKFNDS(0.959)EGDDT(0.041)EETEDYR;QKFNDS(0.521)EGDDT(0.471)EET(0.008)EDYR;QKFNDS(0.457)EGDDT(0.27)EET(0.272)EDYR;QKFNDS(0.996)EGDDT(0.004)EETEDYR 115.31 0.00058604 625454000 493621 545220 487028 508273 575947 482214 622837 478218 440984 554104 TRUE FALSE 531413.0033 518145.1676 503265.2704 466745.47 553332.4269 500564.9917 541057.7537 540722.7346 479339.9912 536023.6319 0.99139846 0.966646127 0.938886349 0.870755396 1.032291104 0.933848737 1.009391604 1.008766596 0.894251601 1 19.03193708 -6.28300525 24.99426738 0.979382785 0.943470797 0.132372872 0.047383196 1828.380041 2119038.038 0.014640743 0.016617591 5.21E-07 6.28300525 -0.035911988 QKIDDRDS(ph)DEEGASDR ddPTM_A459_MK2206_30min_R2 1 QKIDDRDSDEEGASDR 16 2 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 QKIDDRDS(0.985)DEEGAS(0.015)DR 73.984 0.037594 7736400 12581 15967 13485 15079 16833 13108 16297 12465 13396 18854 TRUE FALSE 13544.21103 15174.102 13934.58317 13846.99746 16172.05184 13606.83413 14157.18432 14094.2183 14561.15987 18238.79552 0.742604467 0.831968426 0.764007862 0.759205697 0.886684201 0.746037978 0.776212678 0.772760366 0.798361923 1 14.15472284 -8.596646487 16.76470043 1 0.786677602 0.705196463 0.041495091 570.0937898 129562.3609 0.038706302 0.009993916 2.53E-09 8.596646487 -0.213322398 QKNS(ph)PLLSVSSQTITK ddPTM_A459_MK2206_30min_R2 1 QKNSPLLSVSSQTITK 16 1 Q8ND24;E9PRE9 Q8ND24 RNF214 RING finger protein 214 1 QKNS(1)PLLSVSSQTITK 75.224 0.017153 8926800 51239 52491 53051 63967 52137 50810 57493 48769 41657 57562 TRUE FALSE 55161.89724 49884.37327 54819.69386 58740.69148 50089.83941 52743.61015 49944.10004 55143.27575 45280.25056 55683.75665 0.990628157 0.895851434 0.984482678 1.054898143 0.89954131 0.947199207 0.896924041 0.990293742 0.813168027 1 15.76496892 QKS(ph)DAEEDGGTVSQEEEDR ddPTM_A459_MK2206_30min_R1 1 QKSDAEEDGGTVSQEEEDR 19 1 P27824-3;P27824;P27824-2 P27824-3 CANX Calnexin 1 QKS(1)DAEEDGGTVSQEEEDR 143.74 3.92E-05 10677000 1626.4 1649.7 1039.9 983.09 1180.7 1352.4 1306.8 1253.4 2187.7 1713.2 TRUE FALSE 1488.066139 1542.30423 969.3144853 1058.807762 1133.670219 1428.971719 1219.625756 1242.441656 2415.119244 1925.44415 0.772843055 0.801012187 0.503423839 0.549903129 0.588783746 0.742151736 0.633425673 0.645275354 1.254317994 1 10.91097556 -8.252376645 24.99860876 1.127159 0.650971866 0.757721319 0.106869214 272.9168919 752817.8969 0.07705532 0.028199638 5.59E-09 8.252376645 -0.476187134 QKS(ph)DAEEDGGTVSQEEEDR ddPTM_A459_MK2206_30min_R2 4 QKSDAEEDGGTVSQEEEDR 19 1 P27824-3;P27824;P27824-2 P27824-3 CANX Calnexin 1 QKS(1)DAEEDGGTVSQEEEDR;QKS(1)DAEEDGGTVSQEEEDR;QKS(1)DAEEDGGTVSQEEEDR;QKS(1)DAEEDGGTVSQEEEDR 157.84 1.48E-06 73110300 267661 72079 97657.6 105012 59492 80393 232501 100585 103896 126364 TRUE FALSE 288153.332 68499.66167 100913.4556 96432.18368 57156.04516 83452.41195 201973.3394 113731.8049 112932.6863 122240.753 2.357260773 0.560366817 0.825530383 0.788870989 0.467569479 0.682688955 1.652258632 0.930391887 0.923854635 1 16.89936581 -4.754096932 24.99996702 0.870059534 2.357263383 0.679945253 0.306079156 164.1273215 558782.6706 0.081264134 0.819541301 1.76E-05 4.754096932 1.487203849 QKS(ph)DAEEDGGTVSQEEEDRKPK ddPTM_A459_MK2206_30min_R2 2 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824-3;P27824;P27824-2 P27824-3 CANX Calnexin 1 QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK 63.436 0.0062697 58327000 56322 25265.6 32899 20721.7 19953.3 16092.2 64543 24641.6 31260 40596 TRUE FALSE 60634.05562 24010.94704 33995.83624 19028.67082 19169.83318 16704.59995 56068.42657 27862.34173 33978.93829 39271.35584 1.543976629 0.611411206 0.865664949 0.484543261 0.488137798 0.425363464 1.427718126 0.709482551 0.865234662 1 15.26118979 -4.7552542 24.99130446 0.751049304 1.543977942 0.401507709 0.285215383 215.8601 872101.8507 0.072671442 0.655521529 1.76E-05 4.7552542 0.792928637 QKS(ph)PAQSDSTTQR ddPTM_A459_MK2206_30min_R1 2 QKSPAQSDSTTQR 13 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 QKS(0.994)PAQS(0.006)DSTTQR;QKS(0.987)PAQS(0.012)DSTTQR 75.89 0.025424 24621000 2386.45 2176.13 1621.76 1634.79 1155.51 1734.56 2432.1 2444.4 422.313 1507.58 TRUE FALSE 2183.469896 2034.463541 1511.67945 1760.701809 1109.48359 1832.769288 2269.859047 2423.028869 466.2139476 1694.350392 1.288676714 1.200733656 0.892188214 1.039160387 0.654813547 1.081694375 1.339663305 1.430063628 0.275157931 1 10.72651654 -5.105545266 4.7287573 0.989313028 1.270190611 0.114201896 0.309907244 0.504881286 17.48386612 0.079773848 0.235269107 7.84E-06 5.105545266 0.280877583 QKS(ph)PEIHR ddPTM_A459_MK2206_30min_R1 1 QKSPEIHR 8 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 QKS(1)PEIHR 79.659 0.026412 39253000 4378.4 3850.5 3526.6 4409.8 1640.7 2138.8 4011.6 5529.7 249.51 2622.2 TRUE FALSE 4005.994088 3599.83175 3287.224218 4749.44356 1575.347445 2259.897008 3743.993484 5481.354416 275.4474574 2947.057933 1.359319762 1.221500165 1.11542572 1.611588122 0.534549195 0.766831552 1.270417335 1.859941182 0.093465233 1 11.52505971 -6.246755196 24.96302191 0.973640148 1.304316189 0.156989477 0.449951033 1913.911987 3253637.973 0.133971556 0.172182936 5.67E-07 6.246755196 0.330676041 QKS(ph)PEIHR ddPTM_A459_MK2206_30min_R2 4 QKSPEIHR 8 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR 77.062 0.029861 952912000 304159 266694 270134 252743 231109 179204 252896 252618 225393 275936 TRUE FALSE 327445.6469 253450.3638 279140.1327 232093.0884 222034.4994 186023.7338 219690.4514 285636.04 244997.2757 266932.2309 1.226699548 0.949493296 1.045734087 0.869483193 0.831801011 0.696894988 0.823019576 1.070069504 0.917825753 1 18.02611399 -2.844064127 0.882798559 0.884789352 11.36528229 0.456288285 0.10527698 57.68249888 1.84888594 0.038539621 1122.015464 0.001431976 2.844064127 10.48049294 QKS(ph)YTLVVAK ddPTM_A459_MK2206_30min_R1 1 QKSYTLVVAK 10 1 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 QKS(0.993)YT(0.007)LVVAK 115.34 0.031696 13843000 1816.4 1465.6 1955.7 1741.9 1689.8 1505.9 1691.2 1596.9 1763.7 1142.9 TRUE FALSE 1661.905642 1370.189174 1822.952533 1876.06144 1622.491688 1591.162757 1578.383134 1582.938472 1947.042926 1284.49108 1.293824198 1.066717546 1.419202173 1.460548437 1.263139708 1.238749557 1.228800385 1.232346799 1.515808834 1 10.32698116 -6.49046102 24.89088761 1.256119536 1.308155289 0.038606544 0.15122883 3179.241877 2441078.692 0.047550406 0.053868021 3.23E-07 6.49046102 0.052035753 QKS(ph)YTLVVAK ddPTM_A459_MK2206_30min_R2 2 QKSYTLVVAK 10 1 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 QKS(0.961)YT(0.039)LVVAK;QKS(0.955)YT(0.045)LVVAK 81.278 0.02502 61399000 214610 272120 214938 220160 183748 190679 229310 212201 196216 167163 TRUE FALSE 231040.7066 258606.9165 222103.9256 202172.2237 176533.1303 197935.423 199201.3215 239936.3993 213282.513 161708.485 1.428748198 1.599216742 1.373483436 1.250226441 1.091675123 1.224026203 1.231854479 1.483758872 1.318932108 1 17.30303585 -5.545748038 3.43940631 1.243712692 1.512882117 0.44580382 0.127194108 0.225807468 5.600561051 0.036564895 0.07368036 2.85E-06 5.545748038 0.269169425 QKSDAEEDGGTVS(ph)QEEEDR ddPTM_A459_MK2206_30min_R1 1 QKSDAEEDGGTVSQEEEDR 19 1 P27824-3;P27824;P27824-2 P27824-3 CANX Calnexin 1 QKSDAEEDGGT(0.023)VS(0.977)QEEEDR 87.468 0.0018417 4449300 752.9 710.74 447.47 390.01 646.9 873.28 683.93 535.24 1079.9 856.59 TRUE FALSE 688.8619014 664.4706968 417.0969831 420.0486378 621.1326032 922.7243589 638.3062776 530.5604531 1192.159469 962.7108361 0.715543936 0.690207975 0.433252611 0.436318593 0.645191245 0.958464706 0.663030116 0.551110918 1.238335983 1 9.910958719 -8.259027563 24.99321205 1.11916802 0.636860845 0.617612923 0.151871278 141.2243572 1463523.899 0.124232723 0.041864783 5.51E-09 8.259027563 -0.482307175 QKSDAEEDGGTVS(ph)QEEEDR ddPTM_A459_MK2206_30min_R2 2 QKSDAEEDGGTVSQEEEDR 19 1 P27824-3;P27824;P27824-2 P27824-3 CANX Calnexin 1 QKSDAEEDGGT(0.004)VS(0.996)QEEEDR;QKSDAEEDGGT(0.001)VS(0.999)QEEEDR 106.02 0.00046175 13796100 46297 17461.8 23456.5 18558.6 20110.3 20127.6 46408 22514.1 21938.5 24495.7 TRUE FALSE 49841.53392 16594.6724 24238.528 17042.30301 19320.66858 20893.56992 40314.57385 25456.77017 23846.67107 23696.40732 2.103337154 0.700303307 1.022877759 0.719193538 0.815341681 0.881718889 1.701294771 1.074288175 1.006341204 1 14.53238072 QKVDSLLENLEK ddPTM_A459_MK2206_30min_R1 2 QKVDSLLENLEK 12 1 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7;G3V576;A0A0G2JNQ3;B2RXH8;O60812;A0A0G2JPF8;P0DMR1;B7ZW38 B4DY08;G3V2Q1;A0A0G2JNQ3;O60812 HNRNPC;HNRNPCL2;HNRNPCL1;HNRNPCL4;HNRNPCL3 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 3 0 ; 133.04 0.0050674 16880600 9185.1 8781.2 9148.9 7870.3 8943.3 8618.7 9840.3 8921.1 9207 8880.7 FALSE TRUE 8403.859012 8209.542284 8527.898158 8476.47187 8587.069423 9106.683346 9183.871542 8843.103763 10164.1006 9980.908162 0.841993421 0.822524579 0.854421063 0.849268597 0.860349508 0.912410294 0.920143878 0.886001917 1.018354285 1 13.28495538 -7.600352729 0.51034645 1.009713387 0.82945272 0.825658332 0.026485063 0.347675696 0.202067893 0.025709095 0.018598315 2.51E-08 7.600352729 -0.180260667 QLAELETEDGMQES(ph)P ddPTM_A459_MK2206_30min_R1 2 QLAELETEDGMQESP 15 0 Q96QG7-2;Q96QG7 Q96QG7-2 MTMR9 Myotubularin-related protein 9 1 QLAELETEDGMQES(1)P;QLAELETEDGMQES(1)P 161.04 0.0001238 1372200 1293.64 1334.35 1315.69 1074.27 1481.7 1322.46 1589.11 1390.24 1187.56 913.95 TRUE FALSE 1183.609125 1247.483572 1226.384629 1157.010462 1422.680751 1397.336542 1483.103371 1378.085278 1311.011112 1027.177026 1.152293222 1.214477681 1.193936972 1.126398306 1.385039497 1.360365844 1.443863457 1.34162393 1.27632441 1 10.00446913 -6.259917253 24.99859417 1.328375233 1.176409512 0.211399187 0.115380241 174.4878709 2865686.953 0.033049809 0.040444973 5.50E-07 6.259917253 -0.151965721 QLAEPAS(ph)EPDVLK ddPTM_A459_MK2206_30min_R1 2 QLAEPASEPDVLK 13 0 Q8IWI9;Q8IWI9-3 Q8IWI9 MGA MAX gene-associated protein 1 QLAEPAS(1)EPDVLK;QLAEPAS(1)EPDVLK 147.51 0.0005715 9134900 4574 5217.5 4515.5 4155.6 3629.6 4048.6 3789.6 2661.3 3590.1 3650.5 TRUE FALSE 4184.957281 4877.839802 4209.000441 4475.665032 3485.025346 4277.828233 3536.802699 2638.032535 3963.303742 4102.7515 1.020036744 1.188919144 1.025896996 1.090893522 0.849436128 1.042673005 0.862056281 0.64299106 0.966011162 1 12.00237606 -6.388639501 1.022578638 0.854736573 1.104208552 0.356797333 0.115520266 0.51661496 1.149803235 0.054427785 0.073101508 4.09E-07 6.388639501 0.249471979 QLAEPAS(ph)EPDVLK ddPTM_A459_MK2206_30min_R2 2 QLAEPASEPDVLK 13 0 Q8IWI9;Q8IWI9-3 Q8IWI9 MGA MAX gene-associated protein 1 QLAEPAS(1)EPDVLK;QLAEPAS(1)EPDVLK 206.13 1.27E-05 12736200 107495 115397 107057 111307 102371 92888 119683 93275 91517 117270 TRUE FALSE 115724.8998 109666.5528 110626.2269 102212.862 98351.40017 96422.91793 103968.4783 105466.3628 99476.98324 113443.4895 1.020110545 0.966706448 0.975165939 0.901002451 0.866963813 0.849964316 0.916478141 0.929681934 0.876885784 1 16.79161429 -5.717293479 3.894133349 0.898977101 0.988471409 0.449457668 0.041065089 0.187466597 5.909616677 0.011346153 0.019817248 1.92E-06 5.717293479 0.089494309 QLCY(ph)HEMS(ph)GPQEALS(ph)RLRELCR ddPTM_A459_MK2206_30min_R2 1 QLCYHEMSGPQEALSRLRELCR 22 2 E7EMM9;Q9P0L1-2;Q9P0L1 E7EMM9 ZKSCAN7 Zinc finger protein with KRAB and SCAN domains 7 3 QLCY(1)HEMS(1)GPQEALS(1)RLRELCR 47.047 0.036538 10084000 9654.1 8975.3 7096.8 6919.3 6894.8 6504.9 7890.5 9996.8 6370.9 9358.2 TRUE FALSE 10393.22532 8529.599653 7333.40377 6353.971056 6624.075508 6752.448528 6854.467872 11303.41608 6925.029366 9052.8427 1.148062069 0.942201244 0.810066408 0.701875783 0.731712207 0.745892616 0.757161932 1.248604053 0.764956334 1 13.14415517 -9.487970965 10.58104677 0.999999999 0.867326829 0.043730817 0.177819345 0 0 0.179423745 0.04351665 3.25E-10 9.487970965 -0.13267317 QLEELEEEFCR ddPTM_A459_MK2206_30min_R2 1 QLEELEEEFCR 11 0 M0QZR4;Q92888-2;Q92888;Q92888-3 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 0 119.76 0.04465 0 2900.5 2989.9 2774.8 2565.1 2992.6 3924.4 3671 2315.9 3163.1 2855 FALSE TRUE 3122.56451 2841.425914 2867.310447 2355.523125 2875.095487 4073.745792 3188.99329 2618.596082 3438.22072 2761.841584 1.130609564 1.028815675 1.038187876 0.852881331 1.041006662 1.475010665 1.154661914 0.948134063 1.244901496 1 11.43141486 -6.546250153 24.99954132 1.171496525 1.007023257 0.198083675 0.14750384 370.9719399 396812.3314 0.049911768 0.049914351 2.84E-07 6.546250153 -0.164473268 QLEEPGAGTPS(ph)PVR ddPTM_A459_MK2206_30min_R1 3 QLEEPGAGTPSPVR 14 0 Q96P11-2;Q63ZY6;Q96P11-5;Q96P11;Q96P11-4;Q63ZY6-4;Q63ZY6-5 Q96P11-2 NSUN5;NSUN5P2 Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative methyltransferase NSUN5C 1 QLEEPGAGTPS(1)PVR;QLEEPGAGT(0.001)PS(0.999)PVR;QLEEPGAGTPS(1)PVR 247.5 2.59E-27 111012000 10382.2 10441.3 9618.7 7818.4 10259 10052.4 10812.1 8863 7955.9 7408.1 TRUE FALSE 9499.139371 9761.569472 8965.809443 8420.574523 9850.362306 10621.5582 10090.84454 8785.511725 8782.944275 8325.871356 1.140918345 1.172438181 1.076861395 1.011374565 1.183102871 1.27572932 1.211986602 1.055206278 1.054897908 1 13.02338555 -10.41840802 5.423639327 0.999999864 1.133360165 0.203044761 0.078004231 1.43E-07 2.90E-08 0.083795689 0.020323419 3.82E-11 10.41840802 0.133360301 QLEEPGAGTPS(ph)PVR ddPTM_A459_MK2206_30min_R2 4 QLEEPGAGTPSPVR 14 0 Q96P11-2;Q63ZY6;Q96P11-5;Q96P11;Q96P11-4;Q63ZY6-4;Q63ZY6-5 Q96P11-2 NSUN5;NSUN5P2 Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative methyltransferase NSUN5C 1 QLEEPGAGT(0.037)PS(0.963)PVR;QLEEPGAGTPS(1)PVR;QLEEPGAGTPS(1)PVR;QLEEPGAGT(0.005)PS(0.995)PVR 198.61 9.15E-05 176890700 225298 243443 218695 287060 278463 265801 265001 200753 208393 243381 TRUE FALSE 242546.9881 231353.9746 225986.1821 263606.2797 267529.1435 275916.2433 230206.0504 226992.1064 226518.6465 235439.4979 1.030188181 0.982647248 0.959848216 1.119634904 1.13629678 1.171919944 0.977771582 0.964120755 0.962109792 1 17.84499685 -7.475531756 24.95544619 0.972058253 1.064571881 0.332857201 0.062851931 531.3077861 280039.847 0.030340209 0.020454706 3.35E-08 7.475531756 0.092513628 QLEMENS(ph)PLLSPR ddPTM_A459_MK2206_30min_R2 2 QLEMENSPLLSPR 13 0 Q9HCM4-4;Q9HCM4-3;Q9HCM4 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 QLEMENS(1)PLLSPR;QLEMENS(0.797)PLLS(0.203)PR 189.8 0.00015892 20753000 52473 65616 72023 79461 52491 78717 73221 49666 75431 59387 TRUE FALSE 56490.37322 62357.60485 74424.21087 72968.78212 50429.93959 81712.63059 63606.99475 56157.51673 81991.85203 57449.20705 0.983309886 1.085438913 1.29547847 1.270144287 0.877817853 1.422345665 1.107186644 0.977515959 1.427205983 1 15.80999936 -4.990210542 5.611871012 1.172401168 1.002552978 0.101400092 0.176442023 0.351850687 39.37526613 0.042447585 0.156686516 1.02E-05 4.990210542 -0.16984819 QLES(ph)GGFEAR ddPTM_A459_MK2206_30min_R2 1 QLESGGFEAR 10 0 Q8IYI6 Q8IYI6 EXOC8 Exocyst complex component 8 1 QLES(1)GGFEAR 87.831 0.038827 0 17867 17647 18799 26717 20852 26748 25880 17812 19443 14510 TRUE FALSE 19234.91126 16770.67564 19425.74928 24534.13564 20033.24571 27765.91388 22481.92491 20140.08956 21134.117 14036.53989 1.370345641 1.194787018 1.383941444 1.747876317 1.427221086 1.978116694 1.60167143 1.434832923 1.505650051 1 13.77689972 -3.746088891 13.19521606 1.491715965 1.401642942 0 0.26041907 0 0 0.060163001 0 0.000179437 3.746088891 -0.090073023 QLFHPEQLITGK ddPTM_A459_MK2206_30min_R2 2 QLFHPEQLITGK 12 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;Q9NY65;Q9NY65-2;C9J2C0;F8VQQ4;F8VS66;F8VRZ4;F8VWV9;F8VX09;C9K0S6;P68363;P68363-2;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2 Q9BQE3;P68363;P68366-2 TUBA1C;TUBA1B;TUBA8;TUBA1A;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ; 156 0.00060595 22906000 204340 225590 203348 223190 218080 194163 231440 165043 183855 192701 FALSE TRUE 219984.4275 214387.5286 210127.5208 204954.6631 209517.0834 201552.009 201051.65 186614.6868 199846.3756 186413.1822 1.180090512 1.150066353 1.12721385 1.09946443 1.123939203 1.081211139 1.078526999 1.001080957 1.072061392 1 17.50814436 -5.242083335 0.21159093 0.984821724 1.304050183 0.839331024 0.022270435 3.959638012 0.195862932 0.046389122 0.336344623 5.73E-06 5.242083335 0.319228459 QLGAQS(ph)PGR ddPTM_A459_MK2206_30min_R1 2 QLGAQSPGR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QLGAQS(1)PGR;QLGAQS(1)PGR 104.07 0.014676 43877000 6059 6469.1 6089 3501.8 5043.3 6072.2 7709.6 4504.4 7196.8 10813.9 TRUE FALSE 5543.650233 6047.960414 5675.695645 3771.509243 4842.414682 6416.002717 7195.306651 4465.018506 7944.933114 12153.60757 0.456132074 0.497626765 0.466996784 0.310320143 0.398434346 0.527909321 0.592030523 0.367382152 0.653709861 1 13.56909699 -8.587667361 3.610234753 0.999737507 0.455725588 0.828811691 0.076566696 0.120842964 4.249740471 0.078583335 0.020686666 2.58E-09 8.587667361 -0.544011919 down QLGAQS(ph)PGR ddPTM_A459_MK2206_30min_R2 3 QLGAQSPGR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QLGAQS(1)PGR;QLGAQS(1)PGR;QLGAQS(1)PGR 91.123 0.027636 79806000 358306 214723 222958 237043 203412 228798 227942 157822 169311 318885 TRUE FALSE 385738.1829 204060.1681 230391.3084 217675.8286 195425.0228 237505.0682 198012.9416 178449.8773 184037.3647 308479.8086 1.250448724 0.661502511 0.746860255 0.705640443 0.633509933 0.769920953 0.641899198 0.578481548 0.596594525 1 18.23481654 -4.759671339 24.98917015 0.689985609 1.250449427 0.666918752 0.11551907 25.10958065 354791.8935 0.026959737 0.168422199 1.74E-05 4.759671339 0.560463818 QLHDDYFYHDEL ddPTM_A459_MK2206_30min_R1 3 QLHDDYFYHDEL 12 0 A8MXP8;Q14257;Q14257-2 A8MXP8 RCN2 Reticulocalbin-2 0 ;; 163.46 0.00070401 12327200 6603.3 5683.4 7318.1 5621.6 7170.9 6578.6 7476 6586.8 5325.1 5377 FALSE TRUE 6041.65466 5313.409627 6821.367761 6054.576606 6885.267868 6951.074647 6977.289681 6529.212302 5878.663201 6043.143354 0.999753656 0.879246001 1.128778081 1.001891938 1.139352066 1.150241561 1.154579541 1.080433132 0.972782351 1 12.56108345 -5.265624074 24.99907205 1.086095511 0.939499825 0.387707534 0.069353089 310.8050149 1856736.954 0.018186501 0.040157215 5.42E-06 5.265624074 -0.146595685 QLHLEGASLELS(ph)DDDTESK ddPTM_A459_MK2206_30min_R1 6 QLHLEGASLELSDDDTESK 19 0 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 1 QLHLEGASLELS(0.997)DDDT(0.003)ESK;QLHLEGASLELS(0.996)DDDT(0.004)ESK;QLHLEGASLELS(1)DDDTESK;QLHLEGASLELS(0.999)DDDT(0.001)ESK;QLHLEGASLELS(1)DDDTESK;QLHLEGASLELS(1)DDDTESK 212.06 6.89E-17 63090000 28459.8 28589.12 30753.04 21401.33 24152.94 23633.74 30166.25 26099.62 29594.1 31435.2 TRUE FALSE 26039.14456 26727.96309 28665.60933 23049.66414 23190.87726 24971.86193 28153.9145 25871.43377 32670.5126 35329.6299 0.737034173 0.756531081 0.811375874 0.652417368 0.656414384 0.706824895 0.796892427 0.732287144 0.924734074 1 15.10859102 -8.366028719 2.460279371 1.001473085 0.728467464 0.783456192 0.049276138 0.131781808 1.539815685 0.050841905 0.014114413 4.30E-09 8.366028719 -0.273005621 QLHLEGASLELS(ph)DDDTESK ddPTM_A459_MK2206_30min_R2 6 QLHLEGASLELSDDDTESK 19 0 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 1 QLHLEGASLELS(0.973)DDDT(0.022)ES(0.005)K;QLHLEGASLELS(0.997)DDDT(0.002)ES(0.001)K;QLHLEGASLELS(0.994)DDDT(0.005)ES(0.001)K;QLHLEGASLELS(0.999)DDDTESK;QLHLEGASLELS(0.959)DDDT(0.039)ES(0.002)K;QLHLEGASLELS(0.991)DDDT(0.004)ES(0.005)K 120.33 0.00056552 8790900 66242.7 67220.5 67837.6 71980.7 56465.9 61564.3 72962.1 56156.6 51960.8 74737.4 TRUE FALSE 71314.29204 63882.42772 70099.27173 66099.64656 54248.76505 63907.17258 63382.08863 63496.46043 56480.25646 72298.72476 0.986383816 0.883589966 0.96957826 0.914257434 0.750341935 0.883932224 0.876669524 0.878251458 0.781206814 1 16.14168258 -6.014324477 24.57763529 0.855211745 0.940506831 0.242434647 0.067411832 711.0212834 1219958.481 0.018546142 0.024928287 9.68E-07 6.014324477 0.085295086 QLHVLVPQS(ph)PPTDLPGLTR ddPTM_A459_MK2206_30min_R2 2 QLHVLVPQSPPTDLPGLTR 19 0 O95402 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 1 QLHVLVPQS(0.999)PPT(0.001)DLPGLT(0.001)R;QLHVLVPQS(0.995)PPT(0.003)DLPGLT(0.002)R 97.825 0.00099843 15928500 39987 43777 39348 46375 44565 44547 48205 35993 44835 43326 TRUE FALSE 43048.43546 41603.09784 40659.84268 42586.01415 42815.15418 46242.2673 41875.6256 40697.40868 48734.66726 41912.27617 1.027108031 0.992623204 0.970117741 1.016074956 1.02154209 1.103310808 0.999125541 0.971014042 1.162777871 1 15.35508525 -6.258712697 2.894223731 1.043394056 0.996841464 0.133235566 0.053854992 0.571521559 9.659772863 0.017120369 0.021480726 5.51E-07 6.258712697 -0.046552592 QLILPGNS(ph)GNLK ddPTM_A459_MK2206_30min_R2 1 QLILPGNSGNLK 12 0 Q9P270;D6RIF6 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 QLILPGNS(1)GNLK 108.32 0.0081082 1991600 44086 41374 41711 37569 35793 34096 45583 28758 30516 45231 TRUE FALSE 47461.25806 39319.42732 43101.62392 34499.49252 34387.58697 35393.54717 39597.89734 32516.76934 33170.22652 43755.11617 1.084701909 0.898624681 0.985064781 0.788467625 0.785910083 0.80890077 0.904988966 0.743153537 0.758087955 1 15.4171641 -5.756294439 24.9950806 0.817145002 0.980379927 0.439003214 0.083408583 112.9400247 548675.8669 0.021873659 0.03646129 1.75E-06 5.756294439 0.163234925 QLLDS(ph)DEEQEEDEGR ddPTM_A459_MK2206_30min_R2 2 QLLDSDEEQEEDEGR 15 0 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 QLLDS(1)DEEQEEDEGR;QLLDS(1)DEEQEEDEGR 266.39 5.57E-38 84417000 52868 65123 59241 62231 63328 69414 66091 52415 55953 68718 TRUE FALSE 56915.61473 61889.08652 61216.06537 57146.52823 60841.42452 72055.59841 57413.17231 59265.82047 60819.6908 66475.73729 0.856186288 0.931002634 0.920878321 0.859659939 0.915242568 1.083938311 0.863671087 0.891540626 0.914915626 1 16.02054025 -4.759641168 24.27347167 0.927421197 0.856186174 0.109681391 0.063299854 82.59780998 1114488.109 0.015957605 0.09970742 1.74E-05 4.759641168 -0.071235024 QLLGLQPISTVS(ph)PLHR ddPTM_A459_MK2206_30min_R1 2 QLLGLQPISTVSPLHR 16 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 QLLGLQPIST(0.002)VS(0.998)PLHR;QLLGLQPIS(0.028)T(0.086)VS(0.886)PLHR 107.41 0.0021987 12467700 4888.8 4900 5318.7 3636.1 5415.9 4580.1 6308.5 4884.3 4361.8 3861.4 TRUE FALSE 4472.981888 4581.009109 4957.681463 3916.153052 5200.173235 4839.421304 5887.671476 4841.59708 4815.224719 4339.779384 1.030693381 1.055585712 1.142380989 0.902385284 1.198257509 1.115130719 1.356675295 1.115632075 1.109555185 1 12.08340599 -6.307270228 24.99975456 1.163659542 1.042221351 0.231436248 0.101352417 599.5114431 327019.2227 0.030792433 0.034915456 4.93E-07 6.307270228 -0.121438191 QLLHLCLQDGGS(ph)PPGPGDLAEER ddPTM_A459_MK2206_30min_R1 1 QLLHLCLQDGGSPPGPGDLAEER 23 0 Q96FS4;F6RY50 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 QLLHLCLQDGGS(1)PPGPGDLAEER 110.16 1.06E-05 5749700 793.99 754.97 895.55 961.43 1164.7 741.23 1050.1 1077.3 850.63 727.25 TRUE FALSE 726.4569811 705.8213158 834.7625611 1035.479505 1118.307533 783.197802 980.049745 1067.88128 939.0560325 817.3472205 0.888798497 0.863551375 1.021307151 1.266878359 1.368215985 0.958219203 1.199061697 1.306520966 1.148907109 1 9.674805275 -5.528422103 3.782347673 1.189973248 0.883003669 0.504761544 0.120131486 0.170061547 5.362803257 0.033277602 0.066855344 2.96E-06 5.528422103 -0.306969579 QLLHLCLQDGGS(ph)PPGPGDLAEER ddPTM_A459_MK2206_30min_R2 2 QLLHLCLQDGGSPPGPGDLAEER 23 0 Q96FS4;F6RY50 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 QLLHLCLQDGGS(1)PPGPGDLAEER;QLLHLCLQDGGS(1)PPGPGDLAEER 91.819 9.21E-05 6127000 18548.2 25989 20207.7 23910 26055 22430 24047 16205.8 22185.7 22415 TRUE FALSE 19968.26445 24698.42405 20881.41463 21956.47652 25031.94978 23283.58937 20889.60001 18323.9537 24115.37208 21683.60039 0.920892476 1.139037042 0.963004956 1.012584447 1.154418516 1.073787976 0.963382448 0.845060478 1.112147967 1 14.4043167 -10.4139338 4.804999135 0.999999904 1.020712494 0.004145731 0.095160957 9.98E-08 2.30E-08 0.092835139 0.022515723 3.86E-11 10.4139338 0.02071259 QLLLQQQQQQQVSGLKS(ph)PK ddPTM_A459_MK2206_30min_R2 2 QLLLQQQQQQQVSGLKSPK 19 1 Q9H334-3;Q9H334-4;A0A3B3IRY1;A0A087WVT2;A0A3B3IU08;A0A3B3IU15;G5E965;C9J0F0;A0A3B3IST6;A0A3B3IUB6;A0A3B3IRS5;A0A3B3IST0;Q9H334-6;Q9H334-7;Q9H334;Q9H334-8 Q9H334-3 FOXP1 Forkhead box protein P1 1 QLLLQQQQQQQVSGLKS(1)PK;QLLLQQQQQQQVS(0.371)GLKS(0.629)PK 110.33 0.00036305 34671000 111492 106645 116796 93025 95378 62340 111668 81694 79493 102612 TRUE FALSE 120027.9132 101349.1644 120689.9203 85424.55993 91632.98048 64712.39238 97005.85746 92371.6863 86407.15745 99263.77884 1.209181382 1.021008525 1.215850552 0.860581381 0.923126054 0.651923523 0.97725332 0.930567901 0.870480234 1 16.59897976 -5.769793437 24.99803889 0.880194469 1.135912996 0.573515463 0.102811675 125.8655581 376631.2358 0.028391453 0.042905226 1.70E-06 5.769793437 0.255718527 QLLTLS(ph)SELSQAR ddPTM_A459_MK2206_30min_R2 1 QLLTLSSELSQAR 13 0 P15311;E7EQR4 P15311 EZR Ezrin 1 QLLT(0.078)LS(0.629)S(0.156)ELS(0.137)QAR 127.18 0.0019534 2684000 9303.7 11295 10717 12535 10283 10133 12993 6232.8 7615.9 10724 TRUE FALSE 10015.99843 10734.10672 11074.29943 11510.8504 9879.237752 10518.61842 11287.00349 7047.44836 8278.317216 10374.07676 0.965483354 1.034704772 1.067497348 1.109578295 0.952300429 1.013932966 1.088000769 0.679332583 0.797981103 1 13.34069533 -7.750461047 24.9999978 0.803992617 1.033558002 0.540483495 0.086898578 135.381867 308294.9711 0.039833836 0.022714397 1.78E-08 7.750461047 0.229565386 QLLTLSS(ph)ELSQAR ddPTM_A459_MK2206_30min_R2 1 QLLTLSSELSQAR 13 0 P15311;E7EQR4 P15311 EZR Ezrin 1 QLLT(0.043)LS(0.259)S(0.571)ELS(0.127)QAR 127.07 0.001964 2638000 7777.9 7292.4 8999.5 10927 9058.7 7075.5 8722.9 7686.2 8997.5 5963.1 TRUE FALSE 8373.382004 6930.27002 9299.538838 10034.22915 8703.009922 7344.763111 7577.572752 8690.812731 9780.086286 5768.524535 1.451563906 1.201393871 1.612117411 1.739479322 1.508706406 1.273248136 1.313606747 1.506591968 1.6954225 1 12.49398664 -6.70420302 24.86771062 1.386675018 1.505154448 0.099069743 0.209506941 246.3730569 107041.0835 0.071899433 0.071899392 1.98E-07 6.70420302 0.11847943 QLMEQDASS(ph)SPSAQVIGLK ddPTM_A459_MK2206_30min_R2 2 QLMEQDASSSPSAQVIGLK 19 0 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7;Q9H4L5-2;Q9H4L5-6;Q9H4L5-4;Q9H4L5-8 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 QLMEQDAS(0.001)S(0.745)S(0.253)PS(0.001)AQVIGLK;QLMEQDAS(0.101)S(0.504)S(0.376)PS(0.019)AQVIGLK 274.68 3.48E-59 10108000 47434 60061 55841 59468 59854 58199 62310 46510 48343 59749 TRUE FALSE 51065.58351 57078.45808 57702.71107 54609.27417 57503.83122 60413.80373 54128.62215 52589.01669 52547.78676 57799.39502 0.883496851 0.987526912 0.99832725 0.94480702 0.994886386 1.045232458 0.936491154 0.909854103 0.909140774 1 15.81876677 -10.36921862 4.20137251 1.000000538 0.960188647 0.065681471 0.047389414 69601177.49 253601879.5 761.5322561 0.012502605 4.27E-11 10.36921862 -0.039811891 QLMEQDASSS(ph)PSAQVIGLK ddPTM_A459_MK2206_30min_R2 1 QLMEQDASSSPSAQVIGLK 19 0 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7;Q9H4L5-2;Q9H4L5-6;Q9H4L5-4;Q9H4L5-8 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 QLMEQDAS(0.072)S(0.314)S(0.562)PS(0.052)AQVIGLK 142.88 8.35E-05 7459400 33493 38604 37221 41623 40029 39522 45551 29940 32460 42894 TRUE FALSE 36057.24983 36686.9815 38461.92956 38222.26775 38457.26033 41026.0374 39570.09898 33853.2608 35283.31213 41494.37229 0.868967232 0.884143547 0.926919181 0.921143414 0.926806654 0.988713291 0.95362568 0.81585186 0.850315601 1 15.34062806 -5.129831193 3.798742697 0.919838658 0.871749625 0.109260697 0.053001257 0.611834628 15.17472798 0.014804783 0.047235569 7.42E-06 5.129831193 -0.048089033 QLPALDGSLMGPES(ph)PPAQEEEAPVSPHK ddPTM_A459_MK2206_30min_R1 2 QLPALDGSLMGPESPPAQEEEAPVSPHK 28 0 A0A494C108;Q8N9T8 A0A494C108 KRI1 Protein KRI1 homolog 1 QLPALDGSLMGPES(1)PPAQEEEAPVSPHK;QLPALDGSLMGPES(1)PPAQEEEAPVSPHK 153.69 1.14E-16 10605000 2093.04 1984.84 2107.53 1604.59 2704 2900.1 3219.3 2133.98 1992.44 1858.96 TRUE FALSE 1915.015957 1855.626555 1964.476736 1728.1758 2596.293954 3064.301156 3004.546371 2115.322838 2199.561268 2089.261999 0.916599238 0.888173219 0.940273042 0.827170456 1.242684716 1.466690706 1.4380898 1.012473705 1.052793412 1 11.02877771 -6.267240596 24.59152196 1.227772578 0.896078147 0.486709122 0.15413446 337.0510242 1428767.132 0.051616023 0.060143871 5.40E-07 6.267240596 -0.33169443 QLPALDGSLMGPES(ph)PPAQEEEAPVSPHK ddPTM_A459_MK2206_30min_R2 3 QLPALDGSLMGPESPPAQEEEAPVSPHK 28 0 A0A494C108;Q8N9T8 A0A494C108 KRI1 Protein KRI1 homolog 1 QLPALDGS(0.001)LMGPES(0.999)PPAQEEEAPVSPHK;QLPALDGS(0.002)LMGPES(0.998)PPAQEEEAPVSPHK;QLPALDGS(0.046)LMGPES(0.954)PPAQEEEAPVSPHK 128.08 9.40E-13 3417900 33299.8 33546.7 32301.2 46331 33706.8 34745.8 35858.2 28828.9 26755.5 34081.8 TRUE FALSE 35849.25829 31880.81966 33378.10589 42545.60909 32383.30167 36068.07577 31149.97527 32596.93621 29082.64503 32969.71366 1.087339085 0.966972901 1.01238689 1.290445211 0.982213616 1.093976009 0.944805757 0.988693337 0.882101838 1 15.00885374 -7.266189804 23.88797389 0.952957999 1.070546354 0.296495171 0.089261487 300.617064 1511669.408 0.03702711 0.025892551 5.42E-08 7.266189804 0.117588356 QLPLEPES(ph)PS(ph)GQVGPRPAPPQEESPSSEAK ddPTM_A459_MK2206_30min_R2 1 QLPLEPESPSGQVGPRPAPPQEESPSSEAK 30 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 QLPLEPES(0.95)PS(0.558)GQVGPRPAPPQEES(0.318)PS(0.124)S(0.05)EAK 54.152 0.011764 5026000 11380 18068 15151 13439 18979 12386 18896 12322 12787 12928 TRUE FALSE 12251.26155 17170.76939 15656.12678 12340.99071 18233.7891 12857.35791 16414.9325 13932.52771 13899.19015 12506.16042 0.979618135 1.372984899 1.251873177 0.986792932 1.457984584 1.02808196 1.312547733 1.114053174 1.111387483 1 13.61035131 -8.42940668 1.476822508 1.00426053 1.202222904 0.129037209 0.155004549 0.751330347 3.518762034 0.137067434 0.040995905 3.72E-09 8.42940668 0.197962374 QLPLEPES(ph)PSGQVGPR ddPTM_A459_MK2206_30min_R1 2 QLPLEPESPSGQVGPR 16 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QLPLEPES(0.969)PS(0.031)GQVGPR;QLPLEPES(0.778)PS(0.222)GQVGPR 125.41 0.0012078 3065500 1764.12 1742.93 1696.65 1293.75 1927.48 1790.17 2242.63 1518.46 1937.87 2096.81 TRUE FALSE 1614.07233 1629.46494 1581.486125 1393.394849 1850.70439 1891.527878 2093.028245 1505.184264 2139.318521 2356.578653 0.684921901 0.691453662 0.67109414 0.591278737 0.785335294 0.802658496 0.888163967 0.638715904 0.907806968 1 11.20247812 -6.432808324 4.901374427 0.824550623 0.663288517 0.476327212 0.09135619 0.220175455 8.817173393 0.027818215 0.031338272 3.69E-07 6.432808324 -0.161262106 QLPLEPES(ph)PSGQVGPR ddPTM_A459_MK2206_30min_R2 4 QLPLEPESPSGQVGPR 16 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QLPLEPES(0.5)PS(0.5)GQVGPR;QLPLEPES(0.647)PS(0.353)GQVGPR;QLPLEPES(0.636)PS(0.364)GQVGPR;QLPLEPES(0.974)PS(0.026)GQVGPR 186.17 8.00E-07 106486000 233568 182936 177328 205358 185815 175551 241798 165301 144347 217517 TRUE FALSE 251450.1457 173851.6643 183240.027 188579.5945 178518.9695 182231.7163 210049.6321 186906.4083 156902.0411 210419.4381 1.194994854 0.826214849 0.870832223 0.896208051 0.848395809 0.866040314 0.998242529 0.888256379 0.745663246 1 17.68290846 -4.755333309 24.99990981 0.880860479 1.194995368 0.633639161 0.071345385 128.1838855 524768.8092 0.017346884 0.154963192 1.76E-05 4.755333309 0.31413489 QLPLEPES(ph)PSGQVGPRPAPPQEESPSSEAK ddPTM_A459_MK2206_30min_R1 1 QLPLEPESPSGQVGPRPAPPQEESPSSEAK 30 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QLPLEPES(0.5)PS(0.5)GQVGPRPAPPQEESPSSEAK 94.295 7.24E-08 20987000 585.04 608.9 651.4 559.86 660.63 666.87 552.84 562.2 654.12 358.55 TRUE FALSE 535.2792758 569.2604993 607.1847829 602.9805142 634.3157082 704.6276031 515.9610523 557.2847447 722.1181148 402.9698809 1.328335693 1.412662649 1.506774604 1.496341396 1.574102032 1.748586275 1.280396071 1.382943915 1.791990293 1 8.654528202 -10.73284406 4.714962906 0.999910747 1.499064874 0.474349499 0.158643494 0.000157548 2.64E-05 0.15436549 0.037432119 1.85E-11 10.73284406 0.499154128 QLPLEPES(ph)PSGQVGPRPAPPQEESPSSEAK ddPTM_A459_MK2206_30min_R2 1 QLPLEPESPSGQVGPRPAPPQEESPSSEAK 30 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QLPLEPES(0.5)PS(0.5)GQVGPRPAPPQEESPSSEAK 92.198 3.67E-07 11780000 13319 20308 19314 22054 20368 14755 21773 16496 20238 18503 TRUE FALSE 14338.71288 19299.53425 19957.91912 20252.11765 19568.24998 15316.51186 18914.17895 18652.08384 21998.26466 17899.24863 0.801079039 1.078231531 1.115014353 1.131450715 1.093244213 0.855706973 1.056702398 1.042059599 1.229004922 1 14.12761141 -4.759762039 24.79640431 1.065575714 0.801078673 0.432451553 0.091321043 39.65602965 586043.6404 0.023430607 0.145591056 1.74E-05 4.759762039 -0.264497041 QLPLEPESPS(ph)GQVGPRPAPPQEESPSSEAK ddPTM_A459_MK2206_30min_R2 1 QLPLEPESPSGQVGPRPAPPQEESPSSEAK 30 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QLPLEPES(0.178)PS(0.713)GQVGPRPAPPQEES(0.064)PS(0.021)S(0.024)EAK 44.365 0.023306 10955000 13898 29302 22410 22676 33396 27449 26870 16648 26769 22174 TRUE FALSE 14962.04157 27846.90529 23157.13822 20823.29826 32084.70524 28493.59093 23341.93672 18823.95076 29097.31923 21450.4642 0.69751598 1.298195929 1.079563501 0.970762128 1.495758085 1.328343791 1.088178629 0.877554471 1.356489024 1 14.38872125 -4.751399555 24.99149331 1.166396788 0.697515022 0.36002772 0.187419486 485.4894288 1208415.106 0.047529625 0.632859915 1.77E-05 4.751399555 -0.468881766 QLPLEPESPSGQVGPRPAPPQEES(ph)PSSEAK ddPTM_A459_MK2206_30min_R2 1 QLPLEPESPSGQVGPRPAPPQEESPSSEAK 30 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QLPLEPES(0.01)PS(0.033)GQVGPRPAPPQEES(0.706)PS(0.177)S(0.073)EAK 58.383 0.0020089 12692000 19217 42908 33466 39547 41260 31333 46473 25791 34025 34627 TRUE FALSE 20688.2683 40777.25111 34581.73974 36315.8836 39639.92509 32525.39927 40371.03928 29161.97225 36984.433 33497.12383 0.617613273 1.217335892 1.032379374 1.084149307 1.183382946 0.970990806 1.205209124 0.870581379 1.104107719 1 15.03174961 -4.750085586 24.99659255 1.073471952 0.617612276 0.630568813 0.104851452 313.3146535 689752.0758 0.0244323 0.373542269 1.78E-05 4.750085586 -0.455859676 QLPPPS(ph)PQLPK ddPTM_A459_MK2206_30min_R2 1 QLPPPSPQLPK 11 0 Q14678 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 1 QLPPPS(1)PQLPK 94.781 0.021874 5928700 59978 62941 62624 62738 57681 52054 70938 44859 48269 76648 TRUE FALSE 64569.9618 59815.44146 64711.8529 57612.10471 55416.15412 54034.95145 61623.75539 50722.22532 52467.35037 74146.98204 0.870837356 0.806714445 0.872751002 0.776998647 0.747382464 0.728754562 0.831102679 0.684076734 0.707612757 1 16.17810035 -5.843919982 6.437286066 0.766804406 0.845486485 0.097773801 0.085803843 0.387658653 24.27092669 0.022865792 0.034344242 1.43E-06 5.843919982 0.078682078 QLPTPVGAVQQDPALS(ph)SNR ddPTM_A459_MK2206_30min_R1 1 QLPTPVGAVQQDPALSSNR 19 0 H0YBN6;Q9Y6M4-6;Q9Y6M4-5;Q9Y6M4-3;Q9Y6M4-4;Q9Y6M4;Q9Y6M4-2 H0YBN6 CSNK1G3 Casein kinase I isoform gamma-3 1 QLPTPVGAVQQDPALS(0.999)S(0.001)NR 106.31 0.00082734 7808800 2974.3 3515.4 3387.8 2955.4 2444.5 2501.1 2511 2588.6 2700 2429.5 TRUE FALSE 2721.320166 3286.546821 3157.845575 3183.02542 2347.130389 2642.710121 2343.495772 2565.968143 2980.674662 2730.484802 0.996643587 1.203649557 1.156514613 1.165736362 0.85960207 0.967853811 0.858270945 0.939748187 1.091628366 1 11.41494141 -6.250547249 24.98816179 0.945859153 1.137699762 0.536162236 0.08074606 532.1168724 1220754.433 0.023726399 0.030327864 5.62E-07 6.250547249 0.191840609 QLQEERPELS(ph)ESELTR ddPTM_A459_MK2206_30min_R2 2 QLQEERPELSESELTR 16 1 E9PLT2;E9PKP7;P17480-2;P17480 E9PLT2;E9PKP7 UBTF Nucleolar transcription factor 1 1 QLQEERPELS(0.688)ES(0.269)ELT(0.043)R;QLQEERPELS(0.879)ES(0.117)ELT(0.004)R 80.733 0.012471 7060300 12092.2 17744.4 16011.8 20282.5 17333.5 20084.6 17281.1 14308.5 17147.3 18170 TRUE FALSE 13017.98813 16863.2389 16545.62542 18625.35487 16652.8997 20848.93353 15012.07081 16178.67008 18638.74116 17577.11439 0.74062146 0.959386082 0.941316365 1.059636665 0.94741943 1.186140857 0.854069131 0.920439483 1.06039824 1 14.10141062 -4.212189691 1.441425007 0.997331027 0.015457253 0.435285713 0.086887507 5.165537786 3.104935121 0.024354269 10.96736899 6.13E-05 4.212189691 -0.981873773 QLRY(ph)TGMLET(ph)VRIR ddPTM_A459_MK2206_30min_R2 1 QLRYTGMLETVRIR 14 2 H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BMM1 H3BRD5 MYO9A Unconventional myosin-IXa 2 QLRY(0.795)T(0.289)GMLET(0.916)VRIR 60.364 0.040915 35301000 9951.5 51698 27782 87826 64606 91358 41624 37384 62297 24146 TRUE FALSE 10713.39449 49130.7525 28708.23801 80650.33486 62069.24382 94834.69271 36158.7188 42270.21716 67715.48045 23358.118 0.458658291 2.10336948 1.229047564 3.452775385 2.657287879 4.060031408 1.548015076 1.809658516 2.899012688 1 14.51163642 -3.35995533 10.90015879 2.208686578 1.479999819 0 1.083653297 0 0 0.248890437 0 0.000436561 3.35995533 -0.728686758 QLS(ph)ADSAEAHSLNVNR ddPTM_A459_MK2206_30min_R1 2 QLSADSAEAHSLNVNR 16 0 H0Y4E8;Q9Y2K2-7;Q9Y2K2 H0Y4E8 SIK3 Serine/threonine-protein kinase SIK3 1 QLS(0.974)ADS(0.026)AEAHSLNVNR;QLS(0.982)ADS(0.018)AEAHSLNVNR 130.95 0.00074397 3456800 2172.1 2187.38 2392.35 1844.58 2343.21 1986.96 2470.2 2384.8 2569.3 2487.4 TRUE FALSE 1987.351489 2044.981164 2229.963947 1986.649871 2249.874984 2099.459958 2305.417465 2363.949945 2836.387929 2795.557891 0.710896203 0.731510934 0.797681191 0.710645227 0.804803575 0.750998563 0.824671695 0.845609369 1.014605327 1 11.44892051 -8.008782683 1.324356199 1.01841178 0.752112556 0.882568392 0.035633132 0.13171571 0.415933017 0.030774764 0.010441177 9.80E-09 8.008782683 -0.266299224 QLS(ph)ADSAEAHSLNVNR ddPTM_A459_MK2206_30min_R2 1 QLSADSAEAHSLNVNR 16 0 H0Y4E8;Q9Y2K2-7;Q9Y2K2 H0Y4E8 SIK3 Serine/threonine-protein kinase SIK3 1 QLS(0.991)ADS(0.009)AEAHSLNVNR 193.42 1.16E-06 4031000 7346.7 9381.1 6959.4 9498.9 7027.6 9674.4 10556 6351.4 6211.5 9312.1 TRUE FALSE 7909.169001 8915.248215 7191.422923 8722.809485 6751.661113 10042.56607 9169.98452 7181.549788 6751.765042 9008.24694 0.877992028 0.989676268 0.798315474 0.968313762 0.749497783 1.114819136 1.01795439 0.797219463 0.74950932 1 13.13703066 -12.01990233 2.235027457 2.281463743 0.900755571 0.063994833 0.118116893 12472177.51 820985.2182 81992410.49 0.032000378 9.55E-13 12.01990233 -1.380708172 QLS(ph)ALHR ddPTM_A459_MK2206_30min_R1 1 QLSALHR 7 0 P61313;E7EX53;A0A2R8Y738;A0A2R8YEM3;E7EQV9;E7ENU7;P61313-2 P61313 RPL15 60S ribosomal protein L15;Ribosomal protein L15 1 QLS(1)ALHR 82.287 0.031827 0 884.89 1001.5 912.19 767.68 854.61 1018.4 990.24 877.04 686.55 715.64 TRUE FALSE 809.6254588 936.302168 850.2730843 826.8068466 820.569074 1076.060928 924.1828964 869.3721317 757.9193293 804.298886 1.006622629 1.164122174 1.057160589 1.027984573 1.020229032 1.337886881 1.149054055 1.080906796 0.942335421 1 9.651587912 -8.145617249 4.638698705 0.972730278 1.111528581 0.252905672 0.093040069 0.324101561 10.58911784 0.071683084 0.025284338 7.15E-09 8.145617249 0.138798303 QLS(ph)ENRK ddPTM_A459_MK2206_30min_R2 1 QLSENRK 7 1 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 QLS(1)ENRK 109.01 0.0082264 3530600 23512 21900 24311 21182 21263 19026 21583 18900 21570 24278 TRUE FALSE 25312.0968 20812.47785 25121.51661 19451.36284 20428.10778 19750.04776 18749.12617 21370.29489 23446.11961 23485.81085 1.077761247 0.88617242 1.069646552 0.82821764 0.869806366 0.840935316 0.798317175 0.909923657 0.998309991 1 14.51950178 -1.522879488 0.760316559 0.890766949 33.43955021 0.239049865 0.083868824 557.8318452 2.305710447 0.031201865 31137.85964 0.029999949 1.522879488 32.54878326 QLS(ph)ESESSLEMDDER ddPTM_A459_MK2206_30min_R1 1 QLSESESSLEMDDER 15 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 QLS(0.786)ES(0.207)ES(0.004)S(0.004)LEMDDER 216.71 1.68E-39 0 484.9 475.18 327.48 428.94 329.8 463.37 623.69 405.98 410.8 405.09 TRUE FALSE 443.6567087 444.2456956 305.25157 461.9770331 316.6633676 489.605609 582.0847781 402.4305597 453.5041301 455.2756075 0.974479417 0.97577311 0.670476443 1.014719492 0.695542134 1.075404878 1.278532758 0.883927347 0.996109 1 8.830596355 -6.802547905 24.99963427 1.05402408 0.869663107 0.289475605 0.141190519 197.2898274 119978.0004 0.049737075 0.04386443 1.58E-07 6.802547905 -0.184360973 QLS(ph)LEGSGLGVEDLK ddPTM_A459_MK2206_30min_R2 1 QLSLEGSGLGVEDLK 15 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 QLS(0.999)LEGS(0.001)GLGVEDLK 119.62 0.0018868 3169700 44659 50783 48289 52546 48462 37903 53790 37625 40459 53106 TRUE FALSE 48078.12738 48261.19007 49898.93116 48252.82371 46559.13838 39345.42522 46727.30839 42542.71669 43978.05069 51373.15557 0.935860896 0.939424287 0.971303604 0.939261433 0.906293138 0.765875189 0.909566638 0.828111807 0.856051185 1 15.64872707 -6.525980776 24.99431145 0.860481178 0.94461458 0.262979185 0.057216348 107.3176293 864687.9248 0.01764172 0.017731608 2.98E-07 6.525980776 0.084133402 QLS(ph)LEGSGLGVEDLKDNTPSGK ddPTM_A459_MK2206_30min_R1 1 QLSLEGSGLGVEDLKDNTPSGK 22 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 QLS(1)LEGSGLGVEDLKDNTPSGK 137.86 7.16E-06 58262000 3051.9 2950.8 2744.1 2768.8 2314.5 1688.5 2426.8 2263.7 2031.6 2082.1 TRUE FALSE 2792.319879 2758.702384 2557.838138 2982.053456 2222.308564 1784.101411 2264.9126 2243.90871 2242.79209 2340.046267 1.1932755 1.178909333 1.093071609 1.274356622 0.949685737 0.762421426 0.96789223 0.958916386 0.958439208 1 11.19232134 -6.337844959 6.778929678 0.922530737 1.177456596 0.739417183 0.073153538 0.12922024 9.694309488 0.023026981 0.026166193 4.59E-07 6.337844959 0.254925859 QLS(ph)LEGSGLGVEDLKDNTPSGK ddPTM_A459_MK2206_30min_R2 3 QLSLEGSGLGVEDLKDNTPSGK 22 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 QLS(0.899)LEGS(0.047)GLGVEDLKDNT(0.047)PS(0.007)GK;QLS(0.721)LEGS(0.279)GLGVEDLKDNTPSGK;QLS(0.997)LEGS(0.003)GLGVEDLKDNTPSGK 75.404 0.0010068 37333600 91680 100737 109768 104268 95719 76893 114813 68819 80335 113386 TRUE FALSE 98699.09129 95734.54707 113427.6103 95748.97086 91960.59111 79819.217 99737.91518 77813.87959 87322.39309 109686.2241 0.899831242 0.872803744 1.034109901 0.872935245 0.838396908 0.72770503 0.909302112 0.709422539 0.79611085 1 16.74302282 -6.117337033 3.465958331 0.814403352 0.931721245 0.203351103 0.088636893 0.332423884 7.351847005 0.025908141 0.034964716 7.63E-07 6.117337033 0.117317893 QLS(ph)LGQGSYTVVQPGDSLEQG ddPTM_A459_MK2206_30min_R2 1 QLSLGQGSYTVVQPGDSLEQG 21 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 QLS(0.98)LGQGS(0.01)YT(0.01)VVQPGDSLEQG 93.776 0.0025641 0 1041.6 2802.1 2785.4 3419.4 2604.1 3008.2 3570.3 2101.1 2486.2 2271.6 TRUE FALSE 1121.345697 2662.951789 2878.263846 3140.024082 2501.849949 3122.679159 3101.515321 2375.720984 2702.445182 2197.477878 0.510287593 1.211821887 1.309803332 1.428921817 1.138509732 1.421028712 1.411397745 1.081112583 1.229794033 1 11.10163293 -4.761473654 4.70610028 1.269065987 0.453116953 0.712996998 0.140318356 0.098292783 5.155762489 0.034306482 0.269833209 1.73E-05 4.761473654 -0.815949034 QLS(ph)LPLTQSK ddPTM_A459_MK2206_30min_R1 1 QLSLPLTQSK 10 0 Q9C0I1-3;Q9C0I1-2;Q9C0I1 Q9C0I1-3 MTMR12 Myotubularin-related protein 12 1 QLS(0.998)LPLT(0.002)QSK 136.01 0.0019021 37333000 5913.2 5240.7 5916.8 5083.1 6157.8 4740.2 6038.9 5055.8 4863.8 4362.8 TRUE FALSE 5410.251289 4899.529477 5515.184101 5474.601243 5912.521787 5008.586028 5636.056 5011.597674 5369.409415 4903.296601 1.103390582 0.999231716 1.124791044 1.116514396 1.205825849 1.021473191 1.149442193 1.0220874 1.095061109 1 12.25953632 -10.25603993 5.927713446 0.999999997 1.092729948 0.1759206 0.060439617 2.26E-09 4.34E-10 0.057543773 0.013956414 5.55E-11 10.25603993 0.092729951 QLS(ph)MTLR ddPTM_A459_MK2206_30min_R1 2 QLSMTLR 7 0 E5RJM2;E5RGN0;Q00536;Q00536-3;Q00536-2;A0A087WZU2;E5RIY8;E5RIU4;E5RJQ8;E5RGV7 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 QLS(0.922)MT(0.078)LR;QLS(0.976)MT(0.024)LR 86.882 0.034321 16113700 5599.3 6268.8 5701.3 5597.3 5960.4 5943.9 6381 5247 5457.1 4502.5 TRUE FALSE 5123.050132 5860.699981 5314.311641 6028.405016 5722.984647 6280.438481 5955.335133 5201.126032 6024.385073 5060.303692 1.012399738 1.158171591 1.050196187 1.19131289 1.130956756 1.241118886 1.176873068 1.027828832 1.190518483 1 12.30500825 -1.577625282 19.70750615 1.125405208 0.005607655 0 0.083307179 0 0 0.018281063 0 0.026446897 1.577625282 -1.119797553 QLS(ph)MTLR ddPTM_A459_MK2206_30min_R2 2 QLSMTLR 7 0 E5RJM2;E5RGN0;Q00536;Q00536-3;Q00536-2;A0A087WZU2;E5RIY8;E5RIU4;E5RJQ8;E5RGV7 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 QLS(0.999)MT(0.001)LR;QLS(0.977)MT(0.023)LR 96.665 0.022999 10686100 20646.7 26006.8 19851.6 25116.9 24822.1 25887.4 28215 21055 25186 23541 TRUE FALSE 22227.42723 24715.34013 20513.44244 23064.76893 23847.45963 26872.56315 24510.33661 23806.96079 27376.63275 22772.8591 0.976049039 1.085298074 0.900784673 1.012818321 1.047187774 1.180025882 1.076295976 1.045409392 1.202160547 1 14.47502781 -6.434840665 3.528598918 1.102929503 0.99410077 0.339735307 0.069698457 0.2782577 6.531564557 0.022088372 0.024769804 3.67E-07 6.434840665 -0.108828733 QLS(ph)PEDSSSPVK ddPTM_A459_MK2206_30min_R1 1 QLSPEDSSSPVK 12 0 Q96AY2;Q96AY2-2 Q96AY2 EME1 Crossover junction endonuclease EME1 1 QLS(0.953)PEDS(0.041)S(0.005)S(0.001)PVK 108.72 0.0079431 4142000 1582.2 1436 1809.4 1365.2 1975.4 1878.1 2252.1 1642.2 1221.1 1437.4 TRUE FALSE 1447.625582 1342.516139 1686.582969 1470.347941 1896.715635 1984.436399 2101.866518 1627.842419 1348.037715 1615.475964 0.896098496 0.831034425 1.044016133 0.910163923 1.174090904 1.228391164 1.301081889 1.007654991 0.83445235 1 10.65774357 -6.250957748 24.18049341 1.108707097 0.922784944 0.277578692 0.132980612 628.073819 1448925.852 0.042786561 0.054598419 5.61E-07 6.250957748 -0.185922153 QLS(ph)PEDSSSPVK ddPTM_A459_MK2206_30min_R2 2 QLSPEDSSSPVK 12 0 Q96AY2;Q96AY2-2 Q96AY2 EME1 Crossover junction endonuclease EME1 1 QLS(0.997)PEDSS(0.001)S(0.002)PVK;QLS(0.879)PEDS(0.094)S(0.025)S(0.002)PVK 140.03 0.0011086 9979000 62058 67006 70231 77821 85084 71563 77281 62692 69133 72696 TRUE FALSE 66809.20819 63678.57948 72572.46649 71462.77536 81743.17465 74286.38011 67133.91187 70886.05965 75146.06338 70323.93547 0.950020896 0.905503639 1.031973908 1.0161942 1.162380548 1.056345604 0.954638153 1.007993355 1.068570223 1 16.10172819 -5.273178254 19.94452981 1.038994381 0.927762299 0.410127801 0.052495304 44.59730415 75774.83424 0.014731877 0.031333434 5.33E-06 5.273178254 -0.111232082 QLS(ph)PQSK ddPTM_A459_MK2206_30min_R1 1 QLSPQSK 7 0 E7ERS3;Q86VM9;H3BRH3 E7ERS3;H3BRH3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 QLS(0.923)PQS(0.077)K 99.788 0.020987 61910000 16930 14775 11150 11407 6949.4 7232 15086 16854 0 7730.6 TRUE FALSE 15490.0146 13813.14481 10393.16907 12285.56912 6672.590682 7641.46959 14079.64047 16706.64725 0 8688.325091 1.782853937 1.589851285 1.196222397 1.414031932 0.767995052 0.879510091 1.620524131 1.922884685 0 1 13.08486237 -5.089650996 1.278114101 1.116794434 1.909123586 0.193816897 0.492053663 1.587889332 3.298167858 0.152370698 1.431234335 8.13E-06 5.089650996 0.792329152 QLS(ph)PQSK ddPTM_A459_MK2206_30min_R2 3 QLSPQSK 7 0 E7ERS3;Q86VM9;H3BRH3 E7ERS3;H3BRH3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 QLS(0.612)PQS(0.388)K;QLS(0.92)PQS(0.08)K;QLS(0.974)PQS(0.026)K 90.149 0.030029 387570000 1743020 1602300 1599310 1630910 1950410 1277990 1795810 2045540 1944880 1940010 TRUE FALSE 1876466.951 1522732.112 1652630.197 1497659.436 1873827.103 1326624.805 1560017.99 2312899.101 2114042.147 1876707.633 0.999871753 0.811384835 0.880600776 0.798024908 0.998465116 0.706889439 0.831252542 1.232423773 1.126463233 1 20.83977248 -7.752176826 24.99986337 1.134582634 0.85672432 0.589034617 0.098743951 116.4576112 314324.1453 0.045324312 0.025703225 1.77E-08 7.752176826 -0.277858314 QLS(ph)SGVSEIR ddPTM_A459_MK2206_30min_R1 2 QLSSGVSEIR 10 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 QLS(0.5)S(0.5)GVSEIR;QLS(0.5)S(0.5)GVSEIR 163.71 0.0003875 121150000 7101.6 5122.2 6414.8 5268.3 7353.1 5227.9 6944.7 6245.3 5516.2 4949.8 TRUE FALSE 6497.571628 4788.743849 5979.381249 5674.065379 7060.210457 5523.89918 6481.431734 6190.698001 6089.62873 5563.018593 1.167993872 0.860817516 1.074844736 1.019961606 1.269132996 0.992967952 1.165092589 1.112830723 1.09466266 1 12.44165221 QLS(ph)SGVSEIR ddPTM_A459_MK2206_30min_R2 3 QLSSGVSEIR 10 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 QLS(0.922)S(0.078)GVSEIR;QLS(0.81)S(0.19)GVSEIR;QLS(0.5)S(0.5)GVSEIR 158.86 0.00046844 3878120000 195606 205206 227327 246836 209362 194128 218754 148361 179122 180461 TRUE FALSE 210581.7458 195015.7684 234905.9687 226668.7092 201141.3959 201515.6771 190031.337 167752.2921 194701.7078 174572.5723 1.206270509 1.117104284 1.345606389 1.298421087 1.152193573 1.154337559 1.088552082 0.960931548 1.115305258 1 17.41346738 -7.059677896 1.442526614 1.028233782 1.23485829 0.612204476 0.070292592 0.292881765 1.225415058 0.039093716 0.027401472 8.72E-08 7.059677896 0.206624508 QLS(ph)TEQAVLQESLEK ddPTM_A459_MK2206_30min_R2 2 QLSTEQAVLQESLEK 15 0 Q9ULD2;Q9ULD2-4;Q9ULD2-7;Q9ULD2-3;Q9ULD2-6;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 QLS(0.5)T(0.5)EQAVLQESLEK;QLS(0.791)T(0.209)EQAVLQESLEK 229.93 7.43E-14 12166400 95630 96554 94825 105937 82380 90037 102675 91293 100769 96893 TRUE FALSE 102951.5063 91759.26876 97986.41817 97281.60822 79145.34727 93463.42113 89193.64917 103225.3086 109533.7055 93731.38935 1.098367442 0.97895987 1.045395986 1.03787652 0.844384659 0.997141105 0.951587828 1.101288579 1.168591506 1 16.51624465 -7.774705728 24.40117789 1.101205123 0.990957633 0.259450125 0.073960123 221.6143723 407613.6992 0.04018066 0.019492995 1.68E-08 7.774705728 -0.11024749 QLSDVSS(ph)PR ddPTM_A459_MK2206_30min_R1 1 QLSDVSSPR 9 0 Q9P0K7-4 Q9P0K7-4 RAI14 Ankycorbin 1 QLS(0.001)DVS(0.092)S(0.908)PR 99.752 0.018527 12501000 6148.5 5923.3 4574.2 3914.9 4887.8 4005.6 4729.7 3858.8 3150 3134.9 TRUE FALSE 5625.537788 5537.692093 4263.716048 4216.426276 4693.108576 4232.39361 4414.190343 3825.062918 3477.453772 3523.275079 1.596678562 1.571745597 1.210157014 1.196734908 1.332030134 1.201266865 1.252865656 1.085655486 0.986994684 1 11.7827014 -1.522878745 0.243145573 1.010958225 4.720228763 0.798510122 0.089267703 23.8818096 0.320937746 0.130323537 35.89750554 0.03 1.522878745 3.709270538 QLSES(ph)ESSLEMDDER ddPTM_A459_MK2206_30min_R2 3 QLSESESSLEMDDER 15 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 QLSES(0.98)ES(0.01)S(0.01)LEMDDER;QLS(0.008)ES(0.991)ES(0.001)SLEMDDER;QLSES(0.85)ES(0.075)S(0.075)LEMDDER 276.14 5.37E-46 18450300 31647.2 36245.9 27126.6 41478 35012.2 38497.4 45616.6 38326.2 42779.8 45036 TRUE FALSE 34070.13396 34445.98131 28030.9873 38089.11472 33637.44511 39962.44553 39627.08562 43335.56593 46500.70968 43566.47901 0.782026336 0.790653321 0.643407224 0.874275718 0.772094644 0.91727508 0.909577421 0.994699754 1.06735065 1 15.4109309 -7.125143362 0.869293444 1.035618376 0.753798013 0.772401989 0.058413239 0.272710997 0.415294585 0.042308482 0.027819451 7.50E-08 7.125143362 -0.281820363 QLSES(ph)FK ddPTM_A459_MK2206_30min_R1 3 QLSESFK 7 0 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 QLS(0.001)ES(0.999)FK;QLS(0.004)ES(0.996)FK;QLS(0.003)ES(0.997)FK 108.43 0.016272 73305000 15029 15757.5 15525.4 12997.1 10774.8 10834.6 13487.6 11433.7 15073.6 14583.6 TRUE FALSE 13750.70463 14731.68389 14471.5791 13998.13889 10345.6169 11448.04569 12587.86681 11333.73637 16640.55466 16390.32647 0.838952455 0.898803566 0.882934158 0.854048815 0.631202613 0.698463555 0.768005862 0.69148936 1.015266822 1 14.00055697 -10.8852713 9.028663316 1.000000347 0.801836752 0.214692722 0.108976385 7.96E-07 5.63E-08 0.110343222 0.026762115 1.30E-11 10.8852713 -0.198163595 QLSES(ph)FK ddPTM_A459_MK2206_30min_R2 2 QLSESFK 7 0 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 QLS(0.015)ES(0.985)FK;QLSES(1)FK 118.03 0.011164 64575900 362007 351466 304702 304467 288475 200083 374857 262848 219805 321009 TRUE FALSE 389722.5343 334012.7095 314860.6126 279591.0722 277148.022 207697.2988 325637.8256 297203.1361 238923.2416 310534.5026 1.255005582 1.075605792 1.013931173 0.900354292 0.89248705 0.668838074 1.048636538 0.957069613 0.769393544 1 18.24439405 -4.944518506 1.102186887 0.884771123 1.361444322 0.548797639 0.104484422 1.021779359 1.244245591 0.034002913 0.532922058 1.14E-05 4.944518506 0.4766732 QLSESES(ph)SLEMDDER ddPTM_A459_MK2206_30min_R2 1 QLSESESSLEMDDER 15 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 QLS(0.013)ES(0.183)ES(0.402)S(0.402)LEMDDER 130.47 0.00079443 12415000 30079 21698 22595 23915 20672 23124 30897 23505 25866 26746 TRUE FALSE 32381.87137 20620.50887 23348.30602 21961.068 19860.31341 24004.00002 26840.18679 26577.1842 28115.77792 25873.28021 1.251556475 0.796980851 0.90240997 0.848793343 0.767599363 0.927752486 1.037370854 1.027205827 1.086672339 1 14.65917535 -7.215848155 4.402908192 1.04098794 0.898411235 0.178248426 0.126019168 0.3405593 14.76545566 0.050259083 0.037290313 6.08E-08 7.215848155 -0.142576705 QLSLEGS(ph)GLGVEDLKDNTPSGK ddPTM_A459_MK2206_30min_R2 1 QLSLEGSGLGVEDLKDNTPSGK 22 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 QLS(0.211)LEGS(0.645)GLGVEDLKDNT(0.106)PS(0.038)GK 54.875 0.014628 32199000 59002 75549 77152 77056 69455 52519 69605 54521 52778 76452 TRUE FALSE 63519.23848 71797.34652 79724.20917 70760.27831 66727.84772 54517.64735 60465.77989 61647.0819 57368.53504 73957.3775 0.858862775 0.97079357 1.07797507 0.956771058 0.902247348 0.737149547 0.817576041 0.833548781 0.775697259 1 16.17440645 -6.479954937 3.768043264 0.820846166 0.972754087 0.365246167 0.081368963 0.222377374 6.559457337 0.026356217 0.028857533 3.31E-07 6.479954937 0.151907922 QLSLPLT(ph)QSK ddPTM_A459_MK2206_30min_R1 1 QLSLPLTQSK 10 0 Q9C0I1-3;Q9C0I1-2;Q9C0I1 Q9C0I1-3 MTMR12 Myotubularin-related protein 12 1 QLS(0.316)LPLT(0.682)QS(0.002)K 141.58 0.0030239 33922000 4710.3 4606.6 4471.1 3945.8 4849.7 4290.5 4372.2 4159 3374.6 3659.7 TRUE FALSE 4309.66425 4306.709503 4167.614189 4249.7062 4656.52618 4533.424402 4080.538516 4122.638301 3725.401746 4113.091265 1.047792031 1.047073655 1.013255948 1.033214662 1.132123233 1.102193973 0.992085576 1.002321134 0.905742544 1 12.00600737 -7.44689131 4.219746694 0.969806184 1.06134139 0.532668836 0.040457652 0.199484819 6.649682686 0.019679229 0.012523862 3.57E-08 7.44689131 0.091535206 QLSLPLT(ph)QSK ddPTM_A459_MK2206_30min_R2 2 QLSLPLTQSK 10 0 Q9C0I1-3;Q9C0I1-2;Q9C0I1 Q9C0I1-3 MTMR12 Myotubularin-related protein 12 1 QLS(0.044)LPLT(0.922)QS(0.035)K;QLSLPLT(0.995)QS(0.005)K 142.97 0.0026692 69349000 206988 226400 242584 254896 228674 207508 258165 192092 206197 212305 TRUE FALSE 222835.1604 215157.3052 250671.6295 234070.1814 219695.1098 215404.8623 224267.6254 217199.084 224131.6423 205377.5052 1.085002762 1.047618652 1.220540824 1.139707005 1.069713596 1.048824028 1.091977552 1.057560241 1.091315439 1 17.64791865 -6.312650906 6.864257408 1.06357088 1.124718857 0.294738775 0.047779958 0.346952722 38.80982615 0.015408081 0.017590677 4.87E-07 6.312650906 0.061147978 QLSMS(ph)SADSADAK ddPTM_A459_MK2206_30min_R2 1 QLSMSSADSADAK 13 0 Q5JSZ5;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 QLS(0.008)MS(0.954)S(0.037)ADS(0.001)ADAK 151.49 0.00018993 0 19776 16822 18166 15654 14059 15531 21093 15682 17553 20644 TRUE FALSE 21290.06577 15986.64394 18771.64537 14375.01813 13506.97302 16122.04309 18323.46376 17731.69124 19079.72821 19970.38797 1.06608173 0.800517444 0.939973996 0.719816668 0.676350056 0.80729744 0.917531687 0.887899187 0.955400979 1 14.28557474 -8.018911623 1.311530466 0.988853265 0.830695222 0.206967046 0.1047757 0.720161885 2.233898108 0.099470644 0.033676528 9.57E-09 8.018911623 -0.158158043 QLSPEDSS(ph)SPVK ddPTM_A459_MK2206_30min_R1 2 QLSPEDSSSPVK 12 0 Q96AY2;Q96AY2-2 Q96AY2 EME1 Crossover junction endonuclease EME1 1 QLSPEDS(0.002)S(0.499)S(0.499)PVK;QLSPEDSS(0.5)S(0.5)PVK 209.22 7.32E-06 31954000 12108.7 13224.1 12613.9 9228.9 9195.9 9543 12153.7 10480.1 12835.9 13133.6 TRUE FALSE 11078.79148 12363.20869 11757.70361 9939.711477 8829.60783 10083.31641 11342.94885 10388.47359 14170.23774 14760.68952 0.750560566 0.837576637 0.796555174 0.673390729 0.598183968 0.683119606 0.768456571 0.703793246 0.95999836 1 13.8494725 -8.306812061 4.984513759 0.991536984 0.726147592 0.711172591 0.064697757 0.12790449 7.333277194 0.068514314 0.018643343 4.93E-09 8.306812061 -0.265389392 QLSPEDSS(ph)SPVK ddPTM_A459_MK2206_30min_R2 1 QLSPEDSSSPVK 12 0 Q96AY2;Q96AY2-2 Q96AY2 EME1 Crossover junction endonuclease EME1 1 QLSPEDSS(0.5)S(0.5)PVK 219.97 3.41E-08 12602000 86811 72907 81478 77135 76069 61222 90484 70687 60549 97475 TRUE FALSE 93457.31691 69286.5444 84194.43585 70832.82376 73082.14884 63551.84611 78603.34211 79926.0336 65815.44257 94294.39873 0.991122677 0.734789609 0.892889047 0.751188031 0.775042312 0.673972653 0.83359503 0.847622284 0.697978284 1 16.52488445 -4.750731823 24.91281363 0.793610661 0.991123113 0.271986953 0.092753415 552.2128294 1284721.942 0.021512188 0.3052481 1.78E-05 4.750731823 0.197512452 QLSPEDSSS(ph)PVK ddPTM_A459_MK2206_30min_R1 1 QLSPEDSSSPVK 12 0 Q96AY2;Q96AY2-2 Q96AY2 EME1 Crossover junction endonuclease EME1 1 QLSPEDS(0.001)S(0.082)S(0.917)PVK 136.33 0.0031218 0 2399.2 2653.8 2704.5 2126.9 2123.4 2240.7 2760 2025.9 2380.3 2456.4 TRUE FALSE 2195.135441 2481.037138 2520.926075 2290.714207 2038.820482 2367.566498 2575.885436 2008.18777 2627.740703 2760.717377 0.795132258 0.898692912 0.91314167 0.829753247 0.73851112 0.857591044 0.933049307 0.727415195 0.951832565 1 11.43082749 -8.505654541 20.88326692 1.000000039 0.841557653 0.426870233 0.065542545 71.2482534 86383.19385 0.063378351 0.016364221 3.12E-09 8.505654541 -0.158442386 QLSPEDSSS(ph)PVK ddPTM_A459_MK2206_30min_R2 3 QLSPEDSSSPVK 12 0 Q96AY2;Q96AY2-2 Q96AY2 EME1 Crossover junction endonuclease EME1 1 QLSPEDS(0.008)S(0.088)S(0.903)PVK;QLSPEDSS(0.029)S(0.971)PVK;QLSPEDS(0.001)S(0.027)S(0.973)PVK 195.94 0.00012455 46576000 316104 292618 307422 280286 276390 209127 318641 252789 209276 324781 TRUE FALSE 340305.1653 278087.0156 317671.296 257385.7372 265537.5399 217085.4745 276803.0539 285829.3903 227478.4482 314183.4226 1.083141696 0.885110403 1.011101392 0.819221253 0.845167252 0.690951396 0.88102374 0.909753252 0.724030715 1 18.26124754 -5.765418017 24.99836202 0.830722421 0.982317102 0.356406513 0.094410949 106.4447082 668813.5098 0.025282771 0.039119797 1.72E-06 5.765418017 0.151594681 QLSPQS(ph)K ddPTM_A459_MK2206_30min_R2 1 QLSPQSK 7 0 E7ERS3;Q86VM9;H3BRH3 E7ERS3;H3BRH3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 QLS(0.176)PQS(0.824)K 92.051 0.02753 159180000 1095700 913900 922940 1068900 1192100 724660 1055300 1162200 1157300 1179900 TRUE FALSE 1179587.634 868517.0549 953710.359 981567.4508 1145292.164 752237.4441 916737.8424 1314103.53 1257959.862 1141399.96 1.033456874 0.760922626 0.835561935 0.859968009 1.003410027 0.659048073 0.803169682 1.151308548 1.102120121 1 20.12237299 -7.759508894 24.99998559 1.095035784 0.845596998 0.494868367 0.107945591 39.60186315 512871.7035 0.053385463 0.028802193 1.74E-08 7.759508894 -0.249438786 QLSS(ph)GVSEIR ddPTM_A459_MK2206_30min_R1 4 QLSSGVSEIR 10 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 QLS(0.283)S(0.713)GVS(0.005)EIR;QLS(0.055)S(0.814)GVS(0.131)EIR;QLS(0.3)S(0.699)GVS(0.001)EIR;QLS(0.27)S(0.73)GVSEIR 147.33 0.00082892 2121538000 13834.7 9925.2 11715.1 9315.4 12975.5 9048.8 11827.6 10615.5 10464.7 9400.2 TRUE FALSE 12657.98612 9279.067676 10919.91165 10032.87372 12458.65836 9561.135236 11038.60238 10522.6898 11552.54301 10564.76774 1.198131982 0.878303045 1.033615875 0.949653979 1.179264766 0.905001934 1.044850455 0.996017145 1.093497112 1 13.36697343 -8.216337779 24.94138341 1.046749208 1.018173592 0.006867466 0.100605073 2403.136391 1328947.654 0.062900842 0.023774273 6.08E-09 8.216337779 -0.028575615 QLSS(ph)GVSEIR ddPTM_A459_MK2206_30min_R2 3 QLSSGVSEIR 10 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 QLS(0.056)S(0.516)GVS(0.428)EIR;QLS(0.08)S(0.898)GVS(0.022)EIR;QLS(0.092)S(0.849)GVS(0.06)EIR 179.59 0.00011122 519146000 174482 170202 160607 192078 141454 155930 195206 125366 128532 152172 TRUE FALSE 187840.4761 161750.0162 165961.5572 176384.613 135899.8052 161864.0254 169575.2177 141751.7666 139711.481 147206.6401 1.27603263 1.098795653 1.127405375 1.198210983 0.923190728 1.099570137 1.151953591 0.962944107 0.949084097 1 17.16748322 -1.522878771 0.237103142 0.976582272 2.486915013 0.476703797 0.080024722 48.34428258 0.642263536 0.114862864 28.61688572 0.029999998 1.522878771 1.510332742 QLSS(ph)SSGNTDTQADEDER ddPTM_A459_MK2206_30min_R2 1 QLSSSSGNTDTQADEDER 18 0 J3KP58;P30622-2;P30622-1;P30622;F5H0N7;A0A3B3IS27;A0A3B3ITA2 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 QLS(0.075)S(0.785)S(0.136)S(0.003)GNTDTQADEDER 218.66 2.80E-14 3673500 14176 11671 18512 14744 13073 14227 14808 13537 9919.4 14608 TRUE FALSE 15261.32546 11091.43511 19129.18084 13539.36804 12559.68833 14768.41845 12863.69181 15306.33238 10782.17148 14131.34216 1.079962914 0.78488193 1.353670489 0.958109137 0.88878241 1.045082505 0.910295121 1.083147815 0.762996987 1 13.78661087 -5.94912939 24.99999969 0.952557306 1.062683688 0.119541823 0.152249057 248.1601049 121954.6683 0.041247008 0.06117919 1.12E-06 5.94912939 0.110126382 QLSSS(ph)SSYSGDISR ddPTM_A459_MK2206_30min_R2 1 QLSSSSSYSGDISR 14 0 A0A0A0MS99;I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9 A0A0A0MS99 ABCC1 Multidrug resistance-associated protein 1 1 QLS(0.161)S(0.161)S(0.492)S(0.088)S(0.088)YS(0.01)GDISR 89.466 0.019483 4241200 13052 11234 11136 15646 15113 13877 18491 12014 17390 16316 TRUE FALSE 14051.27116 10676.1359 11507.26868 14367.67175 14519.58768 14405.09896 16063.10949 13584.27105 18902.55077 15783.61026 0.890244432 0.676406457 0.729064422 0.910290581 0.919915498 0.912661851 1.017708194 0.860656772 1.19760628 1 13.94613962 -6.472117369 0.688245241 1.030502327 0.747507714 0.51697428 0.096460312 0.619491833 0.650555607 0.064131428 0.09112674 3.37E-07 6.472117369 -0.282994613 QLSSSSS(ph)YSGDISR ddPTM_A459_MK2206_30min_R1 2 QLSSSSSYSGDISR 14 0 A0A0A0MS99;I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9 A0A0A0MS99 ABCC1 Multidrug resistance-associated protein 1 1 QLS(0.001)S(0.006)S(0.006)S(0.222)S(0.76)YS(0.006)GDISR;QLSSS(0.011)S(0.043)S(0.871)YS(0.074)GDISR 262.82 5.10E-36 39536000 3946.2 4106.3 2677 2707.81 4594.3 5022.3 5474.2 5626 5898.7 5021 TRUE FALSE 3610.554968 3838.979124 2495.292699 2916.365995 4411.299302 5306.658286 5109.026106 5576.812475 6511.890974 5643.039387 0.63982452 0.680303443 0.442189488 0.516807663 0.781723997 0.940390085 0.905367791 0.988263964 1.153968726 1 12.4622567 -6.609269991 2.043070269 1.004019771 0.568353464 0.84848083 0.085268457 0.129715345 1.103916523 0.034987326 0.035661599 2.46E-07 6.609269991 -0.435666307 QLSSSSSYS(ph)GDISR ddPTM_A459_MK2206_30min_R2 2 QLSSSSSYSGDISR 14 0 A0A0A0MS99;I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9 A0A0A0MS99 ABCC1 Multidrug resistance-associated protein 1 1 QLS(0.002)S(0.08)S(0.015)S(0.077)S(0.077)Y(0.004)S(0.67)GDIS(0.077)R;QLS(0.011)S(0.04)S(0.02)S(0.02)S(0.01)YS(0.888)GDIS(0.01)R 112.62 0.0035542 12741300 21114.8 13023.6 17970.8 22376 23004 29937 33236 20060 28070 24600 TRUE FALSE 22731.36532 12376.86696 18569.9375 20547.80922 22100.74737 31076.27351 28872.07328 22681.91088 30511.47786 23797.30401 0.955207586 0.520095342 0.780337869 0.863451138 0.928708032 1.305873703 1.213249755 0.953129433 1.282140105 1 14.53851052 -6.353936708 2.055039042 1.149135977 0.742525459 0.575555021 0.148737152 0.223394774 1.855623643 0.050918007 0.061807266 4.43E-07 6.353936708 -0.406610518 QLSST(ph)SPLAPYPTSQMVSSDR ddPTM_A459_MK2206_30min_R1 1 QLSSTSPLAPYPTSQMVSSDR 21 0 Q6UUV7;Q6UUV7-3 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 QLS(0.001)S(0.01)T(0.896)S(0.093)PLAPYPTSQMVSSDR 288.96 3.02E-86 6337600 1007.6 1221.7 788.17 702.19 984.76 831.9 952.02 807.51 772.83 742.84 TRUE FALSE 921.8983289 1142.167108 734.6712164 756.2727955 945.5349239 879.0014591 888.5124829 800.4500252 853.1684441 834.8686274 1.104243588 1.368080043 0.879984218 0.905858444 1.132555342 1.052862008 1.064254248 0.958773631 1.021919397 1 9.705405387 -5.262357225 24.99956005 1.00581877 1.236161814 0.508028873 0.092101866 61.97611275 1688113.661 0.024079052 0.055244001 5.47E-06 5.262357225 0.230343044 QLSST(ph)SPLAPYPTSQMVSSDR ddPTM_A459_MK2206_30min_R2 1 QLSSTSPLAPYPTSQMVSSDR 21 0 Q6UUV7;Q6UUV7-3 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 QLS(0.002)S(0.016)T(0.864)S(0.116)PLAPY(0.002)PTSQMVSSDR 185.2 4.34E-15 9523700 21143 21332 19919 22401 18983 20754 19106 15322 17315 16301 TRUE FALSE 22761.72434 20272.6839 20583.08952 20570.76664 18237.63204 21543.80801 16597.35925 17324.63801 18821.0274 15769.0997 1.443438418 1.285595518 1.30527994 1.304498483 1.156542376 1.366204058 1.052524213 1.098644712 1.193538487 1 13.94481268 -1.522878745 0.114129727 0.900568005 2.465486226 0.662367612 0.079227931 61.86022303 0.491647361 0.637606679 15.29483582 0.03 1.522878745 1.564918221 QLSSTS(ph)PLAPYPTSQMVSSDR ddPTM_A459_MK2206_30min_R1 1 QLSSTSPLAPYPTSQMVSSDR 21 0 Q6UUV7;Q6UUV7-3 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 QLSST(0.004)S(0.99)PLAPY(0.002)PT(0.002)S(0.001)QMVSSDR 167.97 3.09E-10 6937000 1173.2 1165.3 983.07 860.17 790.36 708.17 978.68 946.99 689.96 791.43 TRUE FALSE 1073.413179 1089.438758 916.3419474 926.4204424 758.8782876 748.2659734 913.3940429 938.7105663 761.683811 889.4783234 1.206789588 1.224806417 1.03020155 1.041532343 0.853172323 0.841241381 1.026887355 1.05534957 0.856326446 1 9.796815637 -5.450876605 1.694423214 0.945426638 1.231913715 0.653217893 0.07570519 0.262138155 1.404177337 0.023918215 0.078390449 3.54E-06 5.450876605 0.286487077 QLSSTS(ph)PLAPYPTSQMVSSDR ddPTM_A459_MK2206_30min_R2 2 QLSSTSPLAPYPTSQMVSSDR 21 0 Q6UUV7;Q6UUV7-3 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 QLSST(0.123)S(0.877)PLAPYPTSQMVSSDR;QLSST(0.106)S(0.894)PLAPYPTSQMVSSDR 217.67 2.34E-20 14593500 35015 44817 38932 44041 35233 42103 34378 25291.4 30844 26399 TRUE FALSE 37695.77532 42591.45295 40229.97345 40442.70942 33849.57539 43705.25917 29864.1273 28597.07282 33526.75537 25537.60279 1.47608903 1.667793696 1.575323016 1.583653319 1.325479751 1.711408057 1.169417801 1.119802554 1.312838783 1 14.64033549 -7.277907454 23.95958625 1.160498235 1.553249553 0.727507552 0.121688935 254.7501474 370636.7739 0.048889646 0.033085737 5.27E-08 7.277907454 0.392751318 QLST(ph)EQAVLQESLEK ddPTM_A459_MK2206_30min_R1 1 QLSTEQAVLQESLEK 15 0 Q9ULD2;Q9ULD2-4;Q9ULD2-7;Q9ULD2-3;Q9ULD2-6;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 QLS(0.35)T(0.65)EQAVLQESLEK 139.08 0.00092373 5632500 1340.2 1639.8 1799.5 1275.4 1600.9 1373.4 1312.3 1001.9 1595.2 1391.3 TRUE FALSE 1226.208952 1533.048722 1677.354954 1373.631529 1537.132763 1451.160721 1224.758861 993.1404939 1761.026748 1563.664748 0.784189165 0.980420339 1.072707533 0.878469334 0.983032178 0.928051056 0.783261798 0.635136461 1.126217593 1 10.61071551 -7.0278393 20.8963245 0.855735345 0.946956805 0.012802933 0.140466204 251.5917302 188843.6891 0.052314069 0.040708091 9.38E-08 7.0278393 0.09122146 QLST(ph)EQAVLQESLEK ddPTM_A459_MK2206_30min_R2 2 QLSTEQAVLQESLEK 15 0 Q9ULD2;Q9ULD2-4;Q9ULD2-7;Q9ULD2-3;Q9ULD2-6;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 QLS(0.348)T(0.64)EQAVLQES(0.012)LEK;QLS(0.343)T(0.657)EQAVLQESLEK 169.25 0.00014162 11353300 76218 86194 80392 85128 68653 74027 90430 73105 89638 80474 TRUE FALSE 82053.30868 81913.7313 83072.22916 78172.77009 65957.33827 76844.14936 78556.43237 82660.07451 97434.55121 77848.13997 1.054017587 1.052224643 1.067106153 1.004170043 0.847256444 0.987103216 1.009098386 1.061811811 1.251597678 1 16.24837495 -7.995142991 5.358522372 1.136247241 1.002387575 0.267607173 0.08104667 0.2033505 18.85210716 0.051388821 0.021878263 1.01E-08 7.995142991 -0.133859666 QLT(ph)QPETHFGR ddPTM_A459_MK2206_30min_R2 2 QLTQPETHFGR 11 0 H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3;Q9UJU6-6 H0Y5J4;B4DDD6 DBNL Drebrin-like protein 1 QLT(0.831)QPET(0.169)HFGR;QLT(1)QPETHFGR 118.24 0.0072755 23947200 97066 188272 94082 130593 99921 129745 136591 99098 152474 65422 TRUE FALSE 104497.4476 178922.6863 97218.64692 119923.1342 95997.59948 134682.5369 118656.4376 112050.4489 165735.9129 63287.2855 1.65116021 2.827150586 1.536148156 1.894900899 1.516854432 2.128113662 1.874885875 1.770504896 2.61878688 1 15.94962807 -5.29305776 24.91740618 1.828780181 2.239156488 0.119007412 0.478005202 1195.035834 941766.2759 0.116649427 0.242863592 5.09E-06 5.29305776 0.410376307 QLTACPELPHNVQEILGLAPPAEPHS(ph)PSPTASPLPLSPTR ddPTM_A459_MK2206_30min_R1 1 QLTACPELPHNVQEILGLAPPAEPHSPSPTASPLPLSPTR 40 0 Q9HA65;Q9HA65-2 Q9HA65 TBC1D17 TBC1 domain family member 17 1 QLTACPELPHNVQEILGLAPPAEPHS(0.879)PS(0.073)PT(0.032)AS(0.014)PLPLS(0.001)PT(0.001)R 69.447 8.24E-08 4380400 446.55 355.15 437.66 300.54 478.18 324.44 529.41 395.4 376.47 358.94 TRUE FALSE 408.5685776 332.0296704 407.9528586 323.6876429 459.133078 342.8095124 494.0940249 391.9430595 415.6054037 403.4081971 1.012791958 0.823061288 1.011265665 0.802382414 1.138135222 0.849783209 1.22479917 0.971579314 1.030235396 1 8.656096589 -6.26345303 24.99902681 1.034487928 0.913059355 0.224472699 0.112330798 273.1616229 3391232.456 0.031891811 0.037976653 5.45E-07 6.26345303 -0.121428573 QLVAGNS(ph)PK ddPTM_A459_MK2206_30min_R1 3 QLVAGNSPK 9 0 Q96EU6-2;Q96EU6 Q96EU6-2 RRP36 Ribosomal RNA processing protein 36 homolog 1 QLVAGNS(1)PK;QLVAGNS(1)PK;QLVAGNS(1)PK 101.56 0.016919 80914000 21813.8 26615.5 26255.9 22976.3 16509.2 15450 19003.9 18987.6 22416.9 21486.3 TRUE FALSE 19958.42176 24882.82611 24473.72266 24745.93861 15851.60361 16324.76565 17736.18451 18821.59342 24747.21697 24148.18506 0.826497797 1.030422206 1.013480831 1.02475356 0.656430434 0.676024538 0.734472776 0.779420622 1.024806499 1 14.55962714 -6.243583085 24.850279 0.790169121 0.980669027 0.269419284 0.127467863 914.7556675 1273048.521 0.038265253 0.049291329 5.71E-07 6.243583085 0.190499906 QLVAGNS(ph)PK ddPTM_A459_MK2206_30min_R2 6 QLVAGNSPK 9 0 Q96EU6-2;Q96EU6 Q96EU6-2 RRP36 Ribosomal RNA processing protein 36 homolog 1 QLVAGNS(1)PK;QLVAGNS(1)PK;QLVAGNS(1)PK;QLVAGNS(1)PK;QLVAGNS(1)PK;QLVAGNS(1)PK 110.64 0.010737 281720400 931934 738680 825558 637185 709768 492184 968676 654826 561904 903641 TRUE FALSE 1003283.584 701998.2253 853081.6917 585124.9472 681898.942 510914.407 841487.6776 740414.0066 610777.3942 874155.2682 1.147717826 0.803058965 0.975892639 0.669360431 0.780066159 0.584466428 0.962629533 0.847005141 0.698705844 1 19.73753003 -2.260780266 1.220032133 0.795311986 199.9999985 0.353047085 0.132826033 919.507892 3.200109105 0.038007888 510521.2593 0.005485544 2.260780266 199.2046865 QLVHELDEAEYR ddPTM_A459_MK2206_30min_R1 4 QLVHELDEAEYR 12 0 Q06323-3;Q06323;Q06323-2;H0YKK6 Q06323-3 PSME1 Proteasome activator complex subunit 1 0 ;;; 205.02 3.23E-05 15560000 7150.2 6733.2 6640.4 6036.6 7814.3 8143.3 8398.5 6306.4 6763 5819.88 FALSE TRUE 6542.037943 6294.867456 6189.668149 6501.539978 7503.039884 8604.366609 7838.251389 6251.26381 7466.038052 6540.890672 1.0001754 0.962386894 0.946303563 0.993983894 1.147097583 1.315473234 1.198346186 0.955720577 1.141440581 1 12.67527139 -6.214453872 5.059382673 1.137335923 0.970388714 0.376892933 0.094434705 0.227172245 13.7286877 0.030492596 0.039074479 6.10E-07 6.214453872 -0.166947208 QLVHELDEAEYR ddPTM_A459_MK2206_30min_R2 4 QLVHELDEAEYR 12 0 Q06323-3;Q06323;Q06323-2;H0YKK6 Q06323-3 PSME1 Proteasome activator complex subunit 1 0 ;;; 166.62 0.00065014 15332700 53204.1 66124 64991 71879 67041 82976 68169 54392.7 64489 62770 FALSE TRUE 57277.4468 62840.37831 67157.7675 66006.25577 64408.63349 86133.70982 59218.32841 61502.01265 70098.13665 60721.82004 0.943276186 1.034889571 1.105990688 1.087026965 1.060716452 1.41849684 0.975239681 1.012848637 1.154414288 1 15.88992741 -3.740969212 18.22189755 1.085387035 0.814512337 0 0.128137985 0 0 0.029446345 0 0.000181564 3.740969212 -0.270874698 QLVTS(ph)PSPMSSSDGK ddPTM_A459_MK2206_30min_R2 1 QLVTSPSPMSSSDGK 15 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 QLVT(0.059)S(0.782)PS(0.101)PMS(0.028)S(0.028)S(0.003)DGK 136.57 0.00040517 10773000 92354 112480 110140 126420 116380 105410 129770 95842 100070 113350 TRUE FALSE 99424.69325 106894.4068 113812.0126 116091.0816 111810.3364 109421.4514 112731.0431 108368.8785 108773.9077 109651.3988 0.906734381 0.974856755 1.037944011 1.058728688 1.019689103 0.997902924 1.028085773 0.988303658 0.991997448 1 16.74256469 -4.882117056 2.992840081 1.016242002 0.900178191 0.711408201 0.02121757 0.180217855 2.672450856 0.006011918 0.044936713 1.31E-05 4.882117056 -0.116063811 QLVTSPS(ph)PMSSSDGK ddPTM_A459_MK2206_30min_R2 3 QLVTSPSPMSSSDGK 15 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 QLVT(0.003)S(0.043)PS(0.726)PMS(0.176)S(0.043)S(0.01)DGK;QLVT(0.016)S(0.306)PS(0.635)PMS(0.031)S(0.01)S(0.003)DGK;QLVT(0.101)S(0.279)PS(0.558)PMS(0.045)S(0.013)S(0.004)DGK 153.22 0.00021178 3251400 65213 77818 75559 81723 75915 67835 84718 59775 58755 84809 TRUE FALSE 70205.75742 73953.67128 78078.09935 75045.96948 72934.19566 70416.50846 73594.42484 67587.79774 63865.4037 82041.68928 0.855732714 0.901415755 0.9516881 0.914729696 0.888989443 0.858301543 0.897036927 0.8238226 0.778450618 1 16.32406958 -6.577674073 3.145855904 0.861955856 0.908589363 0.059380733 0.057875737 0.565661294 11.43586079 0.019813936 0.020364186 2.64E-07 6.577674073 0.046633507 QLVYVEQAGS(ph)SPK ddPTM_A459_MK2206_30min_R1 1 QLVYVEQAGSSPK 13 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 QLVYVEQAGS(0.5)S(0.5)PK 192.4 0.00017878 8429600 1990.4 2531.4 2537.6 2273.6 1641.6 1573.6 2047.5 2449.7 2862.6 2677.2 TRUE FALSE 1821.106028 2366.6054 2365.354782 2448.713066 1576.211596 1662.695872 1910.915011 2428.282531 3160.177514 3008.871748 0.605245481 0.786542464 0.786126821 0.813830988 0.523854696 0.552597788 0.63509354 0.807040889 1.050286546 1 11.5550069 -8.083521543 3.233797226 1.023748382 0.676767854 0.681973592 0.095460579 0.169281739 3.250083131 0.084136228 0.028540806 8.25E-09 8.083521543 -0.346980528 QLVYVEQAGS(ph)SPK ddPTM_A459_MK2206_30min_R2 1 QLVYVEQAGSSPK 13 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 QLVYVEQAGS(0.907)S(0.093)PK 191.63 0.00017289 8272900 52083 38644 46682 37696 46379 26536 51886 41311 34921 49761 TRUE FALSE 56070.51453 36724.99515 48238.35458 34616.11622 44557.92742 27545.84607 45073.30587 46710.48954 37958.36546 48137.30265 1.164803831 0.76292175 1.002099244 0.719112088 0.925642381 0.572234931 0.936348806 0.970359513 0.788543673 1 15.55486768 -2.084923522 12.76659087 0.872636594 1.013605589 0 0.163609974 0 0 0.035335193 0 0.008223875 2.084923522 0.140968995 QLVYVEQAGSS(ph)PK ddPTM_A459_MK2206_30min_R1 3 QLVYVEQAGSSPK 13 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 QLVYVEQAGS(0.482)S(0.518)PK;QLVYVEQAGS(0.078)S(0.922)PK;QLVYVEQAGS(0.488)S(0.512)PK 222.75 7.03E-09 28331400 12084.3 14413.2 16472.6 12764.8 10123.1 9228.2 12232.4 13102.7 15201.7 15321.4 TRUE FALSE 11056.46683 13474.89806 15354.48581 13747.94711 9719.875491 9750.692709 11416.39892 12988.14448 16781.97111 17219.5307 0.642088743 0.782535732 0.891690144 0.798392671 0.564468083 0.56625775 0.662991292 0.754268203 0.974589343 1 14.0717582 -8.23512159 3.396026121 1.000731885 0.705061661 0.574262492 0.097207033 0.200103138 4.546341127 0.097512961 0.029201242 5.82E-09 8.23512159 -0.295670223 QLVYVEQAGSS(ph)PK ddPTM_A459_MK2206_30min_R2 3 QLVYVEQAGSSPK 13 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 QLVYVEQAGS(0.011)S(0.989)PK;QLVYVEQAGS(0.23)S(0.77)PK;QLVYVEQAGS(0.001)S(0.999)PK 265.43 1.88E-30 40668800 304951 255430 316765 238719 257308 193654 338824 252815 240450 358419 TRUE FALSE 328298.283 242745.7176 327325.787 219214.8941 247204.7951 201023.6387 294336.0018 285858.7885 261363.9064 346723.8174 0.946858181 0.700112613 0.944053366 0.632246425 0.712973216 0.579780299 0.84890621 0.824456741 0.753810074 1 18.40342742 -11.11789108 8.555253544 1.000079966 0.766827066 0.258184958 0.115973044 0.000175035 8.29E-06 0.111114511 0.026940055 7.62E-12 11.11789108 -0.2332529 QMDTVLSS(ph)SPDVLFDPINGLTPDEEALSNER ddPTM_A459_MK2206_30min_R1 1 QMDTVLSSSPDVLFDPINGLTPDEEALSNER 31 0 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 QMDT(0.003)VLS(0.12)S(0.438)S(0.438)PDVLFDPINGLT(0.002)PDEEALSNER 60.675 0.003065 1302200 0 0 62.563 0 180.77 0 0 0 75.179 0 TRUE FALSE 0 0 58.31639787 0 173.5695481 0 0 0 82.99412608 0 0 QMDTVLSSS(ph)PDVLFDPINGLTPDEEALSNER ddPTM_A459_MK2206_30min_R1 1 QMDTVLSSSPDVLFDPINGLTPDEEALSNER 31 0 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 QMDT(0.004)VLS(0.062)S(0.209)S(0.725)PDVLFDPINGLTPDEEALSNER 100.71 1.52E-08 1389900 302.21 338.42 332.51 197.76 272.93 361.36 348.71 185.32 358.11 350 TRUE FALSE 276.5054525 316.3887965 309.9401476 212.9915095 262.0586202 381.8198909 325.4481922 183.6997668 395.336816 393.3606424 0.70293116 0.804322452 0.78792872 0.541466244 0.666204475 0.970661143 0.827353215 0.467000882 1.005023821 1 8.619708806 -6.680477674 24.9999364 0.819083809 0.702348132 0.169063788 0.161004432 71.07583507 21941.86097 0.053835998 0.053835983 2.09E-07 6.680477674 -0.116735677 QMEQISQFLQAAER ddPTM_A459_MK2206_30min_R1 2 QMEQISQFLQAAER 14 0 P37802;P37802-2;X6RJP6 P37802 TAGLN2 Transgelin-2 0 ; 298.91 9.68E-78 80586000 3066.9 3041.9 3044 2771.15 3282.9 2967.9 3177.1 2767.25 2617.39 2620.3 FALSE TRUE 2806.04405 2843.871757 2837.381761 2984.584453 3152.135141 3135.939933 2965.161456 2743.056225 2889.477057 2944.922546 0.952841376 0.965686436 0.963482644 1.013467895 1.070362664 1.064863297 1.006872476 0.931452757 0.981172514 1 11.52401398 -5.751853416 8.359171322 1.011616179 0.961032843 0.265902717 0.037274862 0.220543676 110.748551 0.012023706 0.019808629 1.77E-06 5.751853416 -0.050583336 QMEQISQFLQAAER ddPTM_A459_MK2206_30min_R2 1 QMEQISQFLQAAER 14 0 P37802;P37802-2;X6RJP6 P37802 TAGLN2 Transgelin-2 0 179.83 0.010802 6797700 3080.5 3942.6 3983.1 4775.1 5632.4 4316.8 5044.5 3131.5 5103.4 3643.1 FALSE TRUE 3316.345449 3746.816217 4115.894566 4384.959055 5411.243675 4481.078849 4382.15109 3540.797802 5547.284507 3524.225945 0.941013857 1.063160046 1.16788612 1.244233237 1.535441756 1.271507252 1.243436476 1.004702269 1.574043377 1 11.78309071 -5.240841796 1.703509979 1.276484172 0.94520993 0.27197341 0.176139017 0.609274001 2.97059001 0.0501181 0.243629081 5.74E-06 5.240841796 -0.331274241 QMGS(ph)GDAY(ph)PHQY(ph)S(ph)LK ddPTM_A459_MK2206_30min_R2 1 QMGSGDAYPHQYSLK 15 0 A0A494C1B8;A0A494C0U1;Q5VZU9;P29144 A0A494C1B8 TPP2 Tripeptidyl-peptidase 2 4 QMGS(1)GDAY(1)PHQY(1)S(1)LK 43.823 0.037664 17709000 26265 48820 39142 49116 44417 46695 38871 35855 40979 35969 TRUE FALSE 28275.86859 46395.66979 40446.97474 45103.06569 42672.9654 48472.01095 33767.19101 40541.37161 44543.27935 34795.33448 0.812633907 1.333387665 1.162425232 1.296238888 1.226399057 1.393060641 0.970451686 1.165138149 1.280150917 1 15.08660626 -10.41358344 12.20732454 1.000019818 1.190198816 0.096447875 0.165694228 0 0 0.153202212 0.037156994 3.86E-11 10.41358344 0.190178998 QMGYTEAIEVIQAASS(ph)PVK ddPTM_A459_MK2206_30min_R1 1 QMGYTEAIEVIQAASSPVK 19 0 P19838-3;P19838;P19838-2 P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit 1 QMGYTEAIEVIQAAS(0.006)S(0.994)PVK 245.04 1.71E-30 7133500 3019.8 2935.6 2809.6 2048.7 2077.6 2413.8 2564.8 2591.1 3072.5 3034.4 TRUE FALSE 2762.950152 2744.491906 2618.89218 2206.491229 1994.844793 2550.46727 2393.706872 2568.446286 3391.89737 3410.324381 0.810172243 0.804759782 0.767930521 0.64700333 0.584942829 0.747866474 0.701900055 0.753138411 0.994596699 1 11.73569326 -8.240499398 4.117984086 1.005439338 0.721495354 0.734788323 0.065079125 0.114918023 4.463986271 0.061037394 0.018877539 5.75E-09 8.240499398 -0.283943984 QMGYTEAIEVIQAASS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 QMGYTEAIEVIQAASSPVK 19 0 P19838-3;P19838;P19838-2 P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit 1 QMGYTEAIEVIQAAS(0.046)S(0.954)PVK;QMGYTEAIEVIQAAS(0.022)S(0.978)PVK 233.79 2.22E-65 3718000 62471 58656 66140 64463 61985 54036 71455 53167 54332 73842 TRUE FALSE 67253.82779 55743.22833 68345.07459 59196.16669 59551.15745 56092.37784 62072.87267 60116.10945 59057.69915 71432.54159 0.941501258 0.780361822 0.956777864 0.828700273 0.833669867 0.785249644 0.868971918 0.841578755 0.826761835 1 16.12429383 -10.76321018 3.245563282 1.000511031 0.849589113 0.39362304 0.055244878 20671030.18 29949329.01 106495.8037 0.013476214 1.73E-11 10.76321018 -0.150921918 QMLDDFGPHR ddPTM_A459_MK2206_30min_R1 1 QMLDDFGPHR 10 0 A0A494BZY8;A0A1B0GVZ4;A0A494C0Q8;A0A494C085;P06132 A0A494BZY8 UROD Uroporphyrinogen decarboxylase 0 138.25 0.03317 2697800 2809 2350.9 2598.8 2396.1 2823.3 2729.9 3449.9 3003.1 2562.5 2181.3 FALSE TRUE 2570.079799 2197.855983 2422.400697 2580.648037 2710.841983 2884.464579 3219.763466 2976.844213 2828.881045 2451.535912 1.048354946 0.896522042 0.988115526 1.05266581 1.105772903 1.17659487 1.313365817 1.214277221 1.153921928 1 11.25947018 -6.258642654 1.57448628 1.192753938 0.969581595 0.506373261 0.081924926 0.277058557 1.366358353 0.029585655 0.040274394 5.51E-07 6.258642654 -0.223172343 QMMEMEGMYSLDK ddPTM_A459_MK2206_30min_R1 1 QMMEMEGMYSLDK 13 0 H0Y7V4;A0A075B6F3;Q96JB1-2;Q96JB1 H0Y7V4 DNAH8 "Dynein heavy chain 8, axonemal" 0 46.481 0.047008 0 2465.1 1516.4 1556.9 1620.9 3605.3 3305.6 3031.8 2381.7 1569.5 1512.7 FALSE TRUE 2255.4303 1417.682084 1451.221966 1745.741999 3461.693267 3492.760215 2829.554154 2360.877048 1732.655142 1700.104696 1.326642003 0.833879283 0.85360741 1.026843819 2.036164757 2.054438308 1.66434112 1.388665682 1.019146142 1 10.73140788 -6.12964624 8.586692959 1.579209432 0.980205492 0.326596819 0.358477532 0.345346473 22.37135316 0.112093309 0.144986115 7.42E-07 6.12964624 -0.59900394 QMNMS(ph)PPPGNAGPVIMSIEEK ddPTM_A459_MK2206_30min_R1 2 QMNMSPPPGNAGPVIMSIEEK 21 0 Q86U42-2;Q86U42;B4DEH8;G3V4T2;Q92843-2 Q86U42-2 PABPN1 Polyadenylate-binding protein 2 1 QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK 93.411 0.0003428 24732000 6928.93 7304.42 7169.35 6324 6412.37 6443.06 6642.85 6640 6287.23 5473.43 TRUE FALSE 6339.588118 6828.90093 6682.714497 6811.075576 6156.951724 6807.860489 6199.717597 6581.94718 6940.810058 6151.519831 1.030572654 1.110116056 1.086351777 1.10721834 1.000883017 1.106695691 1.007835099 1.069970895 1.128308166 1 12.58672718 QMNMS(ph)PPPGNAGPVIMSIEEK ddPTM_A459_MK2206_30min_R2 5 QMNMSPPPGNAGPVIMSIEEK 21 0 Q86U42-2;Q86U42;B4DEH8;G3V4T2;Q92843-2 Q86U42-2 PABPN1 Polyadenylate-binding protein 2 1 QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK 121.75 4.83E-05 29786100 144370 156266 149060 149226 152261 145531 175040 129538 138380 153469 TRUE FALSE 155423.0782 148506.0577 154029.586 137033.7584 146282.4681 151069.2842 152057.0377 146469.0614 150416.0423 148461.3191 1.046892747 1.000301348 1.037506516 0.92302668 0.98532378 1.01756663 1.024219902 0.986580628 1.013166549 1 17.17972757 QMPSESLDPAFS(ph)PR ddPTM_A459_MK2206_30min_R1 2 QMPSESLDPAFSPR 14 0 Q15018 Q15018 FAM175B BRISC complex subunit Abro1 1 QMPS(0.001)ES(0.009)LDPAFS(0.99)PR;QMPS(0.003)ES(0.006)LDPAFS(0.991)PR 127.2 0.0012356 19534300 1938.58 1772.26 2001.24 1628.9 1929.97 1852.15 1900.28 1630.31 1551.16 1409.34 TRUE FALSE 1773.693591 1656.885552 1865.401405 1754.35816 1853.095208 1957.017132 1773.515788 1616.056372 1712.408633 1583.939679 1.119798698 1.046053441 1.17769725 1.107591522 1.169927891 1.235537665 1.119686445 1.020276462 1.081107226 1 10.62930168 -7.67109769 5.251757824 1.038423211 1.142329836 0.4822241 0.05044877 0.19536993 8.722529015 0.026112068 0.014568729 2.13E-08 7.67109769 0.103906626 QMPSESLDPAFS(ph)PR ddPTM_A459_MK2206_30min_R2 4 QMPSESLDPAFSPR 14 0 Q15018 Q15018 FAM175B BRISC complex subunit Abro1 1 QMPS(0.004)ES(0.053)LDPAFS(0.943)PR;QMPS(0.107)ES(0.035)LDPAFS(0.858)PR;QMPSES(0.001)LDPAFS(0.998)PR;QMPS(0.014)ES(0.013)LDPAFS(0.973)PR 137.32 0.00058791 16619100 53078.2 67347 46133.8 60380 60072.7 62924 56098.7 44924.7 50606 51889.6 TRUE FALSE 57141.9078 64002.64591 47671.87787 55446.76085 57713.94396 65318.61691 48732.8733 50796.51254 55007.61841 50196.4466 1.138365595 1.27504336 0.949706226 1.104595337 1.149761544 1.301259777 0.97084309 1.011954351 1.09584686 1 15.61529762 -7.302257126 24.99886908 1.020657261 1.147059323 0.321776461 0.094672827 706.2644089 432549.5463 0.040931551 0.027596363 4.99E-08 7.302257126 0.126402063 QMQVS(ph)LTSK ddPTM_A459_MK2206_30min_R2 1 QMQVSLTSK 9 0 P55085 P55085 F2RL1 "Proteinase-activated receptor 2;Proteinase-activated receptor 2, alternate cleaved 1;Proteinase-activated receptor 2, alternate cleaved 2" 1 QMQVS(0.84)LT(0.151)S(0.008)K 112.64 0.0095742 5375100 35989 21630 23010 19992 14365 19941 31313 19338 22097 17137 TRUE FALSE 38744.34551 20555.88565 23777.14192 18358.58965 13800.95792 20699.86873 27201.56549 21865.543 24018.95712 16577.82109 2.337119293 1.239963053 1.43427425 1.107418734 0.832495287 1.248648336 1.640840816 1.318963625 1.44886092 1 14.01696678 -4.760713296 24.98626379 1.262407313 2.337120535 0.683871858 0.221158368 11.01950594 378948.706 0.0587495 0.341942742 1.73E-05 4.760713296 1.074713221 QMREEAERTRDELER ddPTM_A459_MK2206_30min_R1 2 QMREEAERTRDELER 15 3 A0A5K1VW66;P35240-4;P35240-6;P35240-5;P35240-3;P35240;P35240-2 A0A5K1VW66 NF2 Merlin 0 ; 120.55 0.001004 13626100 8980.1 9182.7 9548.1 9037.5 7450.4 6841.9 7595.7 7850.4 9267.1 8870.9 FALSE TRUE 8216.295339 8584.904561 8900.001575 9733.569816 7153.634792 7229.282465 7089.004712 7781.76478 10230.44821 9969.894064 0.824110596 0.861082827 0.892687677 0.976296213 0.717523651 0.725111262 0.711041127 0.780526326 1.026134094 1 13.28336246 -8.264564074 24.95510619 1.013067079 0.811629391 0.504797545 0.080034497 258.441063 2063961.143 0.076371306 0.022934338 5.44E-09 8.264564074 -0.201437688 QMS(ph)FDLTK ddPTM_A459_MK2206_30min_R2 2 QMSFDLTK 8 0 Q9ULH0-2;Q9ULH0-4;Q9ULH0;H0Y8E4;E9PH70;A0A1W2PPB7;Q9ULH0-3 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 QMS(0.999)FDLT(0.001)K;QMS(0.999)FDLT(0.001)K 95.018 0.022882 2419800 35246 31649 28451 28961 25975 29064 44978 26779 40651 33117 TRUE FALSE 37944.46086 30077.35668 29399.54214 26594.79366 24955.09099 30170.05089 39072.33457 30279.10725 44186.7505 32036.395 1.184417312 0.938849602 0.917691961 0.830143144 0.778960647 0.941743005 1.219623324 0.945147144 1.379267252 1 14.96742419 -7.177160046 6.771436749 1.130926125 0.918759312 0.310522423 0.148274393 0.308834873 21.01275789 0.056323729 0.043490309 6.65E-08 7.177160046 -0.212166813 QMST(ph)PLLK ddPTM_A459_MK2206_30min_R1 1 QMSTPLLK 8 0 G3V434 G3V434 COQ6 1 QMS(0.014)T(0.986)PLLK 101.64 0.039444 18594000 3305.7 3015 3169 2635.7 3014.8 2306.2 3095.1 2834.4 2789.7 2509.1 TRUE FALSE 3024.532856 2818.722952 2953.897109 2838.702071 2894.714132 2436.775051 2888.631526 2809.61914 3079.699298 2819.946251 1.072549824 0.999566198 1.04750121 1.006651127 1.026513938 0.864121098 1.024356945 0.996337834 1.092112765 1 11.46145195 -1.522903931 0.792727192 0.999679958 16.80356831 0.105065075 0.055274251 1155.219855 4.148597887 0.020260828 32762.62308 0.02999826 1.522903931 15.80388836 QMST(ph)PLLK ddPTM_A459_MK2206_30min_R2 1 QMSTPLLK 8 0 G3V434 G3V434 COQ6 1 QMS(0.002)T(0.998)PLLK 99.442 0.031937 0 16553 24183 18228 25822 23689 25737 21543 18725 18422 20838 TRUE FALSE 17820.31041 22982.10739 18835.71242 23712.26 22758.85083 26716.43957 18714.37822 21172.42179 20024.31226 20158.05777 0.884029137 1.140095323 0.934401153 1.1763167 1.129020022 1.325347902 0.928382012 1.050320524 0.993365159 1 14.29906902 QNDVEIPS(ph)PTQK ddPTM_A459_MK2206_30min_R2 1 QNDVEIPSPTQK 12 0 Q07343-3;Q07343;E9PJ03;E9PNB0;E9PR34;Q07343-4;Q07343-2 Q07343-3 PDE4B "cAMP-specific 3,5-cyclic phosphodiesterase 4B" 1 QNDVEIPS(0.631)PT(0.369)QK 110.97 0.006994 6245000 76458 66457 71482 74818 64093 46948 80233 65632 50049 88472 TRUE FALSE 82311.68327 63156.84202 73865.1742 68705.13007 61576.38678 48734.63904 69698.31072 74210.32775 54402.17155 85585.16589 0.961751752 0.737941457 0.863060478 0.802769141 0.719474995 0.569428575 0.814373729 0.867093345 0.635649543 1 16.38507314 -4.75531453 24.64737827 0.770799185 0.961752131 0.178582299 0.116519486 287.4029961 1156420.766 0.02828923 0.25151218 1.76E-05 4.75531453 0.190952946 QNDVEIPSPT(ph)QK ddPTM_A459_MK2206_30min_R2 1 QNDVEIPSPTQK 12 0 Q07343-3;Q07343;E9PJ03;E9PNB0;E9PR34;Q07343-4;Q07343-2 Q07343-3 PDE4B "cAMP-specific 3,5-cyclic phosphodiesterase 4B" 1 QNDVEIPS(0.268)PT(0.732)QK 94.363 0.044507 7249000 36240 35558 37480 37543 32543 27179 42315 31208 23670 43046 TRUE FALSE 39014.56226 33792.24143 38729.56449 34475.61681 31265.1983 28213.31589 36758.98967 35286.99275 25728.77381 41641.41255 0.936917359 0.811505647 0.930073264 0.827916603 0.75081983 0.677530232 0.882750786 0.847401435 0.617865059 1 15.34573139 -5.979429668 6.842164201 0.786966331 0.884282574 0.140377904 0.105004869 0.309762083 58.73690949 0.028854028 0.042149479 1.05E-06 5.979429668 0.097316243 QNFSSQS(ph)LEHVEK ddPTM_A459_MK2206_30min_R2 1 QNFSSQSLEHVEK 13 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 QNFS(0.005)S(0.014)QS(0.982)LEHVEK 68.123 0.044873 12313000 87414 81554 83096 91249 90704 99142 103930 80128 81381 100120 TRUE FALSE 94106.48305 77504.14695 85866.37917 83793.66481 87142.50521 102914.9183 90283.86616 90601.00472 88459.37228 96853.0926 0.971641488 0.800223771 0.886563112 0.865162511 0.899739005 1.062587838 0.932173292 0.935447721 0.913335547 1 16.5635105 -6.540606362 24.9970801 0.964476741 0.876403796 0.368216786 0.055220015 259.9106664 366488.1642 0.017831676 0.017834939 2.88E-07 6.540606362 -0.088072945 QNGDDPLLTYR ddPTM_A459_MK2206_30min_R2 1 QNGDDPLLTYR 11 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 146.71 0.0094095 6066000 20809 27107 18147 28841 23121 21981 22793 13940 18232 20635 FALSE TRUE 22402.15304 25760.9058 18752.01192 26484.59804 22213.15337 22817.50236 19800.25172 15762.00586 19817.7864 19961.68164 1.122257806 1.290517816 0.93940041 1.326771888 1.112789682 1.143065137 0.99191301 0.789613127 0.992791427 1 14.28494564 -7.346146736 3.280563622 0.914472339 1.159620239 0.463125085 0.112820348 0.20812967 4.321814167 0.048754439 0.031549901 4.51E-08 7.346146736 0.2451479 QNGSNDS(ph)DRYSDNEEGK ddPTM_A459_MK2206_30min_R2 1 QNGSNDSDRYSDNEEGK 17 1 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 QNGS(0.002)NDS(0.524)DRYS(0.474)DNEEGK 104.16 0.013728 8503300 21948 20913 21720 24239 15990 13963 24358 16039 12907 25089 TRUE FALSE 23628.35576 19874.49083 22444.13396 22258.59616 15362.15226 14494.37175 21159.76534 18135.35237 14029.62753 24270.34798 0.973548289 0.818879517 0.924755342 0.917110714 0.632959703 0.597204942 0.871836092 0.747222594 0.578056299 1 14.56690717 -6.244835792 24.57766497 0.724905126 0.903322624 0.304983015 0.125220449 794.7383943 1176420.621 0.036037935 0.046385383 5.69E-07 6.244835792 0.178417497 QNGSNDSDRY(ph)SDNEEDSKIELK ddPTM_A459_MK2206_30min_R1 1 QNGSNDSDRYSDNEEDSKIELK 22 2 G5E972;P42167;H0YJH7;P42167-2;P42167-3 G5E972 TMPO "Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 QNGS(0.211)NDS(0.143)DRY(0.353)S(0.292)DNEEDSKIELK 88.176 0.0014278 11785000 751.06 1228.4 747.21 768.44 589.38 756.76 813.78 793.14 813.98 786.9 TRUE FALSE 687.178403 1148.430937 696.491467 827.6253819 565.9037466 799.6070972 759.494221 786.2056606 898.5961339 884.3871128 0.777010874 1.298561365 0.787541402 0.935818003 0.639882398 0.904136984 0.85878029 0.888983624 1.016066518 1 9.788534192 QNGSNDSDRYS(ph)DNEEDSKIELK ddPTM_A459_MK2206_30min_R1 1 QNGSNDSDRYSDNEEDSKIELK 22 2 G5E972;P42167;H0YJH7;P42167-2;P42167-3 G5E972 TMPO "Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 QNGS(0.003)NDS(0.007)DRY(0.072)S(0.916)DNEEDS(0.002)KIELK 87.062 0.00062726 15528000 2640.5 2897.3 2027.6 2192.6 2197.3 1710.8 1782.8 2112.9 2800.8 2185.2 TRUE FALSE 2415.911609 2708.685243 1889.972161 2361.474432 2109.776888 1807.664018 1663.872665 2094.427138 3091.953183 2455.919073 0.983709779 1.102921213 0.769557996 0.961544074 0.859057984 0.736043804 0.677494907 0.85280788 1.258980076 1 11.26204731 -8.244239705 24.12743211 1.129490024 0.864534409 0.385138449 0.132158581 483.7452735 678593.75 0.095603351 0.035922626 5.70E-09 8.244239705 -0.264955614 QNGSNDSDRYS(ph)DNEEDSKIELK ddPTM_A459_MK2206_30min_R2 2 QNGSNDSDRYSDNEEDSKIELK 22 2 G5E972;P42167;H0YJH7;P42167-2;P42167-3 G5E972 TMPO "Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 QNGS(0.01)NDS(0.021)DRY(0.2)S(0.768)DNEEDSKIELK;QNGS(0.001)NDS(0.019)DRY(0.441)S(0.538)DNEEDSKIELK 90.718 0.00044523 28695000 169392 67104 87008 89406 76340 59272 160945 79855 93383 105498 TRUE FALSE 182360.7818 63771.71294 89908.80329 82101.2438 73342.50802 61527.63749 139812.7282 90292.32268 101505.2845 102055.6089 1.786876623 0.624872201 0.880978559 0.804475567 0.718652398 0.602883449 1.369966136 0.884736505 0.994607603 1 16.63899595 -4.75181019 24.99138113 0.872037809 1.78687845 0.628720918 0.210047238 260.4758657 675985.8109 0.053270581 0.677719281 1.77E-05 4.75181019 0.914840641 QNGSNDSDRYS(ph)DNEEGK ddPTM_A459_MK2206_30min_R1 5 QNGSNDSDRYSDNEEGK 17 1 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 QNGSNDS(0.022)DRYS(0.978)DNEEGK;QNGS(0.056)NDS(0.417)DRY(0.079)S(0.447)DNEEGK;QNGS(0.002)NDS(0.004)DRY(0.158)S(0.836)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDS(0.001)DRY(0.025)S(0.974)DNEEGK 297.7 2.47E-88 168543900 9955.5 12574.9 13225.1 9509 8333.7 7471.6 10981.8 9782.3 13483.4 14663 TRUE FALSE 9108.732447 11756.27172 12327.41706 10241.38483 8001.751082 7894.635535 10249.22416 9696.774382 14885.04768 16479.56314 0.552729 0.713384913 0.748042709 0.621459728 0.48555602 0.479056117 0.621935428 0.588412102 0.903242856 1 14.00839038 -8.353501295 3.493250039 0.994477401 0.602410577 0.748831759 0.081862297 0.129655323 2.80912278 0.088206237 0.023741113 4.43E-09 8.353501295 -0.392066823 QNGSNDSDRYS(ph)DNEEGK ddPTM_A459_MK2206_30min_R2 2 QNGSNDSDRYSDNEEGK 17 1 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 QNGS(0.002)NDS(0.004)DRY(0.104)S(0.891)DNEEGK;QNGSNDS(0.002)DRY(0.308)S(0.69)DNEEGK 59.537 0.034806 57878000 20868.5 19593.7 17016.6 20632.8 17371.6 10718.7 20150.5 18027.4 14536.9 24042 TRUE FALSE 22466.20841 18620.70535 17583.92495 18947.03424 16689.5037 11126.60764 17504.71514 20383.64308 15801.29329 23257.51151 0.96597645 0.800631888 0.756053585 0.814663006 0.717596278 0.478409207 0.752647812 0.876432677 0.679406018 1 14.50540912 -3.965898274 1.130030974 0.741293622 1.929800137 0.180338798 0.128045881 14.19295961 3.88808721 0.039197274 31.21282847 0.000108169 3.965898274 1.188506515 QNLAMT(ph)GEVS(ph)LT(ph)GK ddPTM_A459_MK2206_30min_R1 1 QNLAMTGEVSLTGK 14 0 K7ERR6;K7EJE8;K7EKE6;P36776-3;P36776-2;P36776 K7ERR6 LONP1 "Lon protease homolog, mitochondrial" 3 QNLAMT(1)GEVS(1)LT(1)GK 81.526 0.025005 4319200 3265.2 3714.9 3758.7 3504.4 4145.1 2608 3284.6 3836 2571.1 2347.1 TRUE FALSE 2987.477594 3473.059335 3503.569916 3774.309495 3979.99189 2755.662706 3065.490327 3802.462256 2838.375046 2637.876468 1.132531273 1.316611819 1.328178161 1.430813589 1.508786305 1.044651916 1.162105339 1.441486098 1.076007569 1 11.36516129 -6.768384549 24.99875183 1.173521539 1.345909281 0.311542616 0.144430641 243.9982699 878252.7715 0.051823263 0.046699938 1.70E-07 6.768384549 0.172387742 QNLWFANPGGSNS(ph)MPSQSR ddPTM_A459_MK2206_30min_R1 2 QNLWFANPGGSNSMPSQSR 19 0 M0QZ22;Q5PRF9;M0QX45 M0QZ22 SAMD4B Protein Smaug homolog 2 1 QNLWFANPGGS(0.01)NS(0.99)MPSQSR;QNLWFANPGGS(0.231)NS(0.758)MPS(0.01)QS(0.001)R 188.09 2.59E-15 24477000 8565.5 6967.4 7238.6 5684 6693.6 6624.1 6805.4 6459.6 5667.2 4774.7 TRUE FALSE 7836.959246 6513.820994 6747.264 6121.782665 6426.979738 6999.150818 6351.424183 6403.124398 6256.32572 5366.225883 1.460422915 1.213855163 1.257357433 1.140798542 1.197672233 1.30429672 1.183592402 1.193226774 1.165870736 1 12.38969207 -1.522878746 0.025169981 2.31E-14 2.8692138 0.584022558 0.072339103 1568.093948 3.04594597 119.1748672 250.3499941 0.03 1.522878746 2.8692138 QNLWFANPGGSNS(ph)MPSQSR ddPTM_A459_MK2206_30min_R2 2 QNLWFANPGGSNSMPSQSR 19 0 M0QZ22;Q5PRF9;M0QX45 M0QZ22 SAMD4B Protein Smaug homolog 2 1 QNLWFANPGGS(0.017)NS(0.967)MPS(0.014)QS(0.001)R;QNLWFANPGGS(0.005)NS(0.994)MPSQSR 212.47 9.32E-17 13843400 83877 86410 78088 76446 76013 80533 69506 54167 76421 77106 TRUE FALSE 90298.68761 82119.00505 80691.41495 70200.11726 73028.34769 83597.73975 60379.77871 61246.81288 83067.96044 74590.03753 1.210599841 1.100937977 1.081798825 0.941146024 0.979063024 1.120762806 0.809488515 0.821112509 1.113660258 1 16.18669533 -4.535151734 0.645491388 0.949965026 1.455482979 0.378476462 0.099015623 4.685955953 1.181556727 0.046583928 1.877185961 2.92E-05 4.535151734 0.505517953 QNNGRSETTKS(ph)R ddPTM_A459_MK2206_30min_R1 1 QNNGRSETTKSR 12 2 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 QNNGRS(0.001)ET(0.121)T(0.406)KS(0.472)R 57.885 0.040632 5065800 204.4 197.62 174.21 192.04 172.93 178.91 145.54 154.37 0 0 TRUE FALSE 187.0147067 184.7549021 162.3851106 206.8309541 166.0418319 189.0397296 135.8312922 153.0203594 0 0 0 QNPEQS(ph)ADEDAEK ddPTM_A459_MK2206_30min_R1 1 QNPEQSADEDAEK 13 0 Q99613-2;Q99613;B5ME19;H3BPE3 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QNPEQS(1)ADEDAEK 228.99 5.24E-13 8954800 2552.8 2456.7 2543 1891.7 1513.4 1567 2829 2051.7 3060.4 4653.4 TRUE FALSE 2335.670955 2296.768383 2370.388245 2037.399062 1453.118073 1655.722186 2640.282572 2033.762203 3378.539532 5229.898323 0.446599687 0.439161192 0.453237921 0.389567624 0.277848246 0.316587835 0.504843958 0.388872226 0.646004821 1 12.35256718 -8.610557155 1.821823652 1.000388363 0.397018247 0.893126247 0.064206419 0.143867979 1.040376729 0.066349555 0.018745526 2.45E-09 8.610557155 -0.603370115 down QNPEQS(ph)ADEDAEK ddPTM_A459_MK2206_30min_R2 2 QNPEQSADEDAEK 13 0 Q99613-2;Q99613;B5ME19;H3BPE3 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QNPEQS(1)ADEDAEK;QNPEQS(1)ADEDAEK 230.97 3.79E-13 54009000 117815 70076 81680 70189 57893 41696 95567 59094 45587 93124 TRUE FALSE 126835.007 66596.12774 84403.17043 64454.33418 55619.82993 43282.7705 83018.9381 66817.7887 49552.07486 90085.37151 1.40794232 0.739255737 0.936924264 0.715480584 0.61741245 0.480463917 0.921558481 0.741716303 0.550056841 1 16.45900523 -2.629865229 1.301753441 0.717895262 200 0.58509169 0.16473136 293.2398071 2.259570014 0.046937797 172695.7333 0.002344956 2.629865229 199.2821047 QNPQSPPQDSS(ph)VTSK ddPTM_A459_MK2206_30min_R2 1 QNPQSPPQDSSVTSK 15 0 C9JEF4;C9J172;Q9BRX7;A0A2R8YCS4;E7EP63;E7ER52;A6NDI8;Q9UBN7 C9JEF4 HDAC6 Histone deacetylase 6 1 QNPQS(0.206)PPQDS(0.115)S(0.306)VT(0.298)S(0.074)K 122.75 0.0015228 14065000 25997 21475 23162 26979 22463 20032 32202 26011 21743 25374 TRUE FALSE 27987.35031 20408.58273 23934.20952 24774.7294 21580.98975 20794.3318 27973.83872 29410.72701 23634.16684 24546.04846 1.140197794 0.83144066 0.975073832 1.009316405 0.879204235 0.847155982 1.139647335 1.198185812 0.962850166 1 14.58320317 -7.273052954 24.84632976 1.091686317 0.942827355 0.260031236 0.104245469 842.1172661 1801636.243 0.042339091 0.028812286 5.33E-08 7.273052954 -0.148858962 QNPTVGSHCAGLFSTSVLGGSSS(ph)APNLQDYAR ddPTM_A459_MK2206_30min_R1 2 QNPTVGSHCAGLFSTSVLGGSSSAPNLQDYAR 32 0 A0A087WZV0;O43314;O43314-2;K7ENU7 A0A087WZV0;K7ENU7 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 QNPTVGSHCAGLFSTSVLGGS(0.217)S(0.217)S(0.566)APNLQDYAR;QNPTVGSHCAGLFS(0.001)T(0.047)S(0.01)VLGGS(0.024)S(0.07)S(0.848)APNLQDYAR 136.47 4.53E-19 26341000 4497.1 2580.9 3192 1972.72 5839.1 4451.5 5507.1 3870 2975 3102.62 TRUE FALSE 4114.59803 2412.882941 2975.335933 2124.659236 5606.516283 4703.540083 5139.731407 3836.164998 3284.261896 3486.995989 1.179983585 0.691966079 0.853266233 0.609309343 1.607835598 1.348880268 1.473971127 1.100134617 0.941859958 1 11.76776899 -6.251310297 24.959789 1.267051542 0.824914865 0.418337323 0.23698347 662.5919308 1632739.153 0.071683389 0.09143255 5.61E-07 6.251310297 -0.442136678 QNS(ph)PVTQDGIQESPWQDR ddPTM_A459_MK2206_30min_R1 1 QNSPVTQDGIQESPWQDR 18 0 O75815 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 QNS(0.996)PVT(0.004)QDGIQESPWQDR 142.84 0.00029815 4567000 433.23 384.11 529 293.32 522.95 541.49 622.99 503.08 276.87 352.67 TRUE FALSE 396.3815135 359.1043692 493.0929539 315.9115572 502.1197941 572.1486959 581.4314738 498.6816246 305.6516273 396.3614221 1.00005069 0.906002323 1.244048806 0.797029023 1.266823071 1.44350248 1.466922464 1.258148742 0.771143735 1 8.630672742 -5.258435592 24.94914939 1.1776886 0.953026492 0.106818852 0.227884171 536.0484879 4452300.275 0.062178747 0.150447447 5.52E-06 5.258435592 -0.224662108 QNS(ph)PVTQDGIQESPWQDR ddPTM_A459_MK2206_30min_R2 3 QNSPVTQDGIQESPWQDR 18 0 O75815 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 QNS(0.988)PVT(0.012)QDGIQESPWQDR;QNS(0.999)PVT(0.001)QDGIQESPWQDR;QNS(0.995)PVT(0.005)QDGIQESPWQDR 284.84 1.67E-67 16355400 32321.8 44594 38925.3 43704.7 39102.6 40129.4 43218 31030 39362.5 30875.2 TRUE FALSE 34796.38186 42379.52681 40223.05007 40133.88621 37567.23545 41656.55244 37543.42469 35085.72754 42786.1791 29867.74475 1.165015375 1.418906153 1.346705297 1.343720008 1.257786142 1.394700296 1.256988936 1.174702939 1.432521252 1 14.86630069 -11.47021819 2.727053875 0.776771452 1.310783793 0.515344746 0.090220093 24720244.01 8339647.525 34870059.27 0.021575396 3.39E-12 11.47021819 0.534012341 QNS(ph)SSSDSGGSIVR ddPTM_A459_MK2206_30min_R2 1 QNSSSSDSGGSIVR 14 0 A0A2R8Y4W2;A0A2R8YE63;Q12929;Q12929-2 A0A2R8Y4W2 EPS8 Epidermal growth factor receptor kinase substrate 8 1 QNS(0.332)S(0.332)S(0.332)S(0.004)DS(0.001)GGSIVR 163.9 0.00026464 9453700 3452.8 11900 9479.7 11921 13755 11054 11767 8775.1 10513 10335 TRUE FALSE 3717.149023 11309.0633 9795.748467 10947.01617 13214.90959 11474.66772 10221.97877 9922.035699 11427.40174 9997.769796 0.371797821 1.131158602 0.979793361 1.094945812 1.321785744 1.147722737 1.022425898 0.992424901 1.142995085 1 13.28739059 -4.759730152 24.99432385 1.095589252 0.371796918 0.829727539 0.097947671 18.10950043 264739.3641 0.025974547 0.161657535 1.74E-05 4.759730152 -0.723792335 QNS(ph)TGQAQIR ddPTM_A459_MK2206_30min_R2 1 QNSTGQAQIR 10 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 QNS(0.995)T(0.005)GQAQIR 108.68 0.010529 14359000 14148 16955 15601 17713 21719 12731 21842 17043 19333 18361 TRUE FALSE 15231.18176 16113.03935 16121.12955 16265.79124 20866.20293 13215.48713 18974.11916 19270.57862 21014.54939 17761.88207 0.857520712 0.907169594 0.907625075 0.915769577 1.17477432 0.744036419 1.06824936 1.084940128 1.183126276 1 14.11649684 -7.494115203 24.75535392 1.095738922 0.926596292 0.360066459 0.108381503 674.9969606 580937.9881 0.044385949 0.029855201 3.21E-08 7.494115203 -0.16914263 QNS(ph)VNSGMLLPMSK ddPTM_A459_MK2206_30min_R2 1 QNSVNSGMLLPMSK 14 0 H3BMS5;Q6ZVD8-3;Q6ZVD8 H3BMS5 PHLPP2 PH domain leucine-rich repeat-containing protein phosphatase 2 1 QNS(0.999)VNS(0.001)GMLLPMSK 124.46 0.0018728 0 15864 14814 15022 15124 16941 14734 15445 12845 11757 18428 TRUE FALSE 17078.56004 14078.3583 15522.82598 13888.32082 16275.81122 15294.71269 13417.05295 14523.8856 12779.60261 17826.69587 0.958032838 0.789734587 0.870762933 0.779074312 0.913002125 0.857966771 0.752638237 0.814726728 0.716880049 1 14.12175171 -7.138967324 23.19241405 0.80556571 0.857197929 0.037646272 0.08525029 24.68545634 4573.434088 0.030415272 0.023559569 7.26E-08 7.138967324 0.051632219 QNSNSQST(ph)PGSSGQR ddPTM_A459_MK2206_30min_R2 4 QNSNSQSTPGSSGQR 15 0 Q96HA1;Q96HA1-2;Q96HA1-3;A6NF01;A8CG34-2;A8CG34 Q96HA1;A8CG34-2 POM121;POM121B;POM121C Nuclear envelope pore membrane protein POM 121;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121C 1 QNSNSQS(0.002)T(0.998)PGSSGQR;QNSNSQS(0.007)T(0.993)PGSSGQR;QNS(0.005)NS(0.002)QS(0.135)T(0.78)PGS(0.07)S(0.007)GQR;QNS(0.008)NS(0.108)QS(0.03)T(0.853)PGSSGQR 270.99 1.31E-44 6643270 25238.67 16214.65 18340.05 17830.01 20864.22 17952.15 21939.17 19076.36 26328.63 22850.1 TRUE FALSE 27170.96198 15409.45406 18951.49811 16373.24115 20044.98589 18635.33165 19058.53063 21569.70575 28618.64665 22104.50311 1.22920483 0.697118319 0.857359155 0.740719711 0.90682816 0.843055895 0.862201269 0.975805954 1.294697578 1 14.43205268 -8.02553337 4.736216871 1.148995747 0.865872891 0.338955239 0.149125204 0.19783493 11.20651328 0.094311838 0.036687249 9.43E-09 8.02553337 -0.283122856 QNSNSQSTPGSS(ph)GQR ddPTM_A459_MK2206_30min_R2 1 QNSNSQSTPGSSGQR 15 0 Q96HA1;Q96HA1-2;Q96HA1-3;A6NF01;A8CG34-2;A8CG34 Q96HA1;A8CG34-2 POM121;POM121B;POM121C Nuclear envelope pore membrane protein POM 121;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121C 1 QNSNS(0.015)QS(0.023)T(0.16)PGS(0.034)S(0.768)GQR 137.27 0.00040232 301730 518.96 1285.7 673.84 1007.8 2185.5 2523.4 672.95 824.64 564.68 914.9 TRUE FALSE 558.6919766 1221.854008 696.3054893 925.4595162 2099.686289 2619.429755 584.5908566 932.4232794 613.7948457 885.0468879 0.631256925 1.380552855 0.786744181 1.045661568 2.372401188 2.959650829 0.660519645 1.05352981 0.693516755 1 9.789610078 -6.031309954 24.8168727 1.514119008 0.96738465 0.102829334 0.708590998 1489.218027 1180380.824 0.228783794 0.295704339 9.30E-07 6.031309954 -0.546734358 QNSPAGNKENIKPNET(ph)SPSFSK ddPTM_A459_MK2206_30min_R1 1 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 QNSPAGNKENIKPNET(0.488)S(0.488)PS(0.023)FS(0.002)K 99.148 0.00050485 19381000 3934.5 4160.6 4052.3 3888.6 3620.4 3403.6 3733.3 4281.4 3072.5 2413.4 TRUE FALSE 3599.850114 3889.744184 3777.241166 4188.100646 3476.191802 3596.308891 3484.258369 4243.968171 3391.89737 2712.390212 1.3271874 1.434065116 1.39258767 1.544062734 1.281597237 1.325881827 1.284571207 1.56465989 1.250519691 1 11.40534903 -8.533605532 23.15291308 0.999999995 1.39193078 0.628449812 0.093278587 359.9388613 776900.2136 0.088832196 0.022936374 2.93E-09 8.533605532 0.391930784 QNSPAGNKENIKPNET(ph)SPSFSK ddPTM_A459_MK2206_30min_R2 1 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 QNSPAGNKENIKPNET(0.473)S(0.473)PS(0.045)FS(0.008)K 59.163 0.022934 54413000 17007 23725 24274 29878 32219 17423 29531 20945 20186 27194 TRUE FALSE 18309.069 22546.851 25083.28304 27436.87183 30953.92017 18086.04447 25653.54423 23682.58341 21941.74179 26306.66201 0.69598602 0.85707761 0.95349547 1.042962874 1.176657083 0.687508148 0.975172913 0.900250416 0.834075482 1 14.68314058 -4.847990207 2.488490224 0.945586565 0.661082196 0.284266771 0.121700764 0.608123362 5.384060509 0.032749764 0.352087086 1.42E-05 4.847990207 -0.284504368 QNSPVT(ph)QDGIQESPWQDR ddPTM_A459_MK2206_30min_R2 1 QNSPVTQDGIQESPWQDR 18 0 O75815 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 QNS(0.131)PVT(0.817)QDGIQES(0.052)PWQDR 101.39 0.0059761 5378100 5378.7 10248 7186.3 10255 10222 12824 8021.6 7060.6 9899.7 5838.2 TRUE FALSE 5790.497408 9739.099222 7425.887655 9417.133696 9820.632919 13312.02631 6968.354284 7983.444663 10760.75801 5647.700012 1.025284168 1.724436355 1.314851646 1.667428099 1.738872974 2.357070361 1.23383931 1.41357449 1.905334559 1 12.46344774 -5.77019117 24.48417513 1.653821569 1.391815281 0.080890831 0.384412307 369.3675655 1033352.581 0.107061841 0.161656314 1.70E-06 5.77019117 -0.262006288 QNSS(ph)SSDSGGSIVR ddPTM_A459_MK2206_30min_R2 1 QNSSSSDSGGSIVR 14 0 A0A2R8Y4W2;A0A2R8YE63;Q12929;Q12929-2 A0A2R8Y4W2 EPS8 Epidermal growth factor receptor kinase substrate 8 1 QNS(0.042)S(0.42)S(0.42)S(0.11)DS(0.008)GGSIVR 218.83 9.94E-09 22477000 34249 45242 34150 46379 31285 33807 44613 35843 36800 43838 TRUE FALSE 36871.12977 42995.34807 35288.54396 42589.68734 30056.59371 35093.54907 38755.25951 40527.80317 40000.79748 42407.56965 0.869446895 1.013860224 0.832128421 1.004294462 0.708755393 0.827530306 0.913875986 0.955673798 0.943246638 1 15.37203418 -7.634757234 3.465935373 0.962955138 0.87805836 0.188247556 0.083502638 0.462682379 10.78634976 0.045264944 0.024024611 2.32E-08 7.634757234 -0.084896778 QNSSSS(ph)DSGGSIVR ddPTM_A459_MK2206_30min_R2 2 QNSSSSDSGGSIVR 14 0 A0A2R8Y4W2;A0A2R8YE63;Q12929;Q12929-2 A0A2R8Y4W2 EPS8 Epidermal growth factor receptor kinase substrate 8 1 QNS(0.172)S(0.172)S(0.172)S(0.48)DS(0.004)GGSIVR;QNS(0.017)S(0.144)S(0.144)S(0.534)DS(0.144)GGS(0.017)IVR 208.38 6.03E-06 27273100 52485 58455 48797 66025 54304 64557 70456 53258 64408 63134 TRUE FALSE 56503.29195 55552.2097 50423.86763 60630.5463 52171.7521 67013.76187 61205.04257 60219.00346 70010.09142 61073.94275 0.925162015 0.90958938 0.825619984 0.992740006 0.854239136 1.097256192 1.002146575 0.98600157 1.146316879 1 15.89826936 -6.759946086 24.99999997 1.042706991 0.902777824 0.583859454 0.061110698 29.40253697 492245.5456 0.019978839 0.01896988 1.74E-07 6.759946086 -0.139929167 QNTAWDTET(ph)SPR ddPTM_A459_MK2206_30min_R2 2 QNTAWDTETSPR 12 0 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 QNTAWDTET(0.5)S(0.5)PR;QNTAWDT(0.009)ET(0.873)S(0.118)PR 152.11 0.0011801 69206000 310960 274507 292010 306800 263910 264521 286950 229037 242850 297410 TRUE FALSE 334767.3367 260875.3816 301745.4677 281733.4586 253547.5674 274587.532 249273.1203 258972.9223 263972.654 287705.5361 1.163576278 0.906744393 1.048799657 0.979242396 0.881274552 0.954404756 0.866417531 0.90013187 0.917509818 1 18.13423346 -1.522878745 0.776910008 0.923154147 45.09496589 0.529867942 0.059173299 349.9682126 1.347083818 0.021224136 27141.7953 0.03 1.522878745 44.17181174 QNTAWDTETS(ph)PR ddPTM_A459_MK2206_30min_R1 2 QNTAWDTETSPR 12 0 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 QNTAWDTET(0.005)S(0.995)PR;QNTAWDT(0.005)ET(0.075)S(0.92)PR 131.08 0.0020759 27882000 11455.5 11421.7 11516.2 8853.6 10845.7 9545.6 12007.7 10452 11435.4 11339.1 TRUE FALSE 10481.14957 10678.14525 10734.51243 9535.505806 10413.6928 10086.06362 11206.68824 10360.61927 12624.15075 12743.87331 0.822446152 0.837904222 0.842327302 0.748242357 0.817152882 0.791444122 0.879378503 0.81298825 0.990605481 1 13.63751621 -8.264295215 18.61964338 0.995304211 0.819069917 0.826951932 0.032262486 2.894660434 18850.38222 0.027159595 0.008344023 5.44E-09 8.264295215 -0.176234293 QNVGTLESFS(ph)PGDFR ddPTM_A459_MK2206_30min_R1 1 QNVGTLESFSPGDFR 15 0 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9 Q6ULP2-7 AFTPH Aftiphilin 1 QNVGTLES(0.034)FS(0.966)PGDFR 146.2 0.00036702 0 671.16 825.5 827.11 530.17 767.31 634.31 830.33 1007.4 673.15 764.16 TRUE FALSE 614.0743176 771.7598 770.9680777 571.0037853 736.7464179 670.224084 774.9402007 998.592408 743.1263514 858.8299099 0.715012729 0.898617748 0.897695887 0.664862482 0.857849045 0.780392108 0.902320927 1.162735946 0.865277679 1 9.746228626 -7.526376504 24.92476341 1.014909816 0.810209499 0.479824454 0.096582252 85.83603528 611642.0178 0.043241095 0.025121462 2.98E-08 7.526376504 -0.204700317 QPAPGGGGGGGPS(ph)PCGPGGGGR ddPTM_A459_MK2206_30min_R1 2 QPAPGGGGGGGPSPCGPGGGGR 22 0 Q9H6S0;D6RF50;D6RA70 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 QPAPGGGGGGGPS(1)PCGPGGGGR;QPAPGGGGGGGPS(1)PCGPGGGGR 150.63 2.26E-07 7779300 1373.45 854.27 1015.06 841.95 1228.21 868.64 879.01 945.6 770.33 860.55 TRUE FALSE 1256.630865 798.6568677 946.1605553 906.7971349 1179.287795 917.8216461 820.3728467 937.3327189 850.4085602 967.1614308 1.299297951 0.825774108 0.97828607 0.937586122 1.219328808 0.948984954 0.848227422 0.969158497 0.879282954 1 9.917612903 -6.982152639 24.96043651 0.918312616 1.034538961 0.17207505 0.132697022 461.767968 645803.6309 0.045764438 0.040352958 1.04E-07 6.982152639 0.116226346 QPAPGGGGGGGPS(ph)PCGPGGGGR ddPTM_A459_MK2206_30min_R2 2 QPAPGGGGGGGPSPCGPGGGGR 22 0 Q9H6S0;D6RF50;D6RA70 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 QPAPGGGGGGGPS(1)PCGPGGGGR;QPAPGGGGGGGPS(1)PCGPGGGGR 174.55 1.10E-12 7857700 5764.4 8534.9 5704.4 6872.4 6285.2 8516.4 9492.8 3624.4 5687.5 7893.5 TRUE FALSE 6205.726896 8111.069277 5894.581849 6310.902936 6038.411467 8840.49757 8246.383957 4098.121524 6182.188469 7635.935741 0.812700251 1.062223354 0.771952783 0.826474076 0.79078867 1.157749079 1.079944127 0.536688844 0.809617666 1 12.89858925 -7.747511204 24.99939402 0.754864826 0.927487849 0.136713887 0.164731495 391.3037457 702345.6556 0.079205778 0.045433579 1.79E-08 7.747511204 0.172623024 QPAQELS(ph)PTPGGTAHQALK ddPTM_A459_MK2206_30min_R1 1 QPAQELSPTPGGTAHQALK 19 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 QPAQELS(0.733)PT(0.241)PGGT(0.026)AHQALK 121.44 0.0012239 0 484.13 366.65 269.68 269.78 382.37 237.28 407.23 401.68 357.24 295.52 TRUE FALSE 442.9522012 342.7810184 251.374873 290.5585023 367.1393932 250.7145885 380.0644297 398.1681541 394.3763764 332.1312487 1.333666143 1.032064943 0.756854027 0.874830368 1.105404549 0.754866004 1.144319998 1.19882774 1.187411236 1 8.375609655 -7.463810217 24.99539533 1.150187502 0.96839148 0.168569609 0.167825844 414.1893187 175268.072 0.071811522 0.048415181 3.44E-08 7.463810217 -0.181796022 QPAQELS(ph)PTPGGTAHQALK ddPTM_A459_MK2206_30min_R2 2 QPAQELSPTPGGTAHQALK 19 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 QPAQELS(0.49)PT(0.49)PGGT(0.021)AHQALK;QPAQELS(0.557)PT(0.331)PGGT(0.112)AHQALK 169.7 4.17E-09 27108000 53785 62918 58273 64890 56605 60469 69188 49308 48951 57789 TRUE FALSE 57902.82095 59793.58361 60215.79274 59588.27943 54382.40328 62770.19017 60103.53249 55752.7249 53208.6695 55903.34966 1.035766574 1.069588566 1.07714105 1.065916082 0.972793287 1.122834151 1.075132937 0.997305622 0.951797519 1 15.77064711 -7.879696347 4.703995619 0.975678428 1.060057632 0.473913686 0.037449819 0.182675409 6.607012709 0.021783083 0.010039053 1.32E-08 7.879696347 0.084379204 QPAQELSPT(ph)PGGTAHQALK ddPTM_A459_MK2206_30min_R1 1 QPAQELSPTPGGTAHQALK 19 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 QPAQELS(0.101)PT(0.88)PGGT(0.019)AHQALK 145.88 0.00011409 8994700 1343.6 1186.4 1141.1 986.23 1316 984.66 1147.7 1274.6 998.83 789.37 TRUE FALSE 1229.319764 1109.165144 1063.645311 1062.189605 1263.580933 1040.410598 1071.139027 1263.456307 1102.661953 887.163115 1.385675017 1.250238119 1.19892869 1.197287835 1.42429381 1.17273879 1.20737552 1.424153332 1.242907797 1 9.793055575 -8.560270154 22.42901341 0.999999999 1.27812491 0.45780097 0.091625723 4577.45865 2745756.763 0.088047866 0.022733861 2.75E-09 8.560270154 0.278124912 QPAQS(ph)QNLSPLSGFSR ddPTM_A459_MK2206_30min_R2 1 QPAQSQNLSPLSGFSR 16 0 A6PVU7;Q9P2M7-2;Q9P2M7 A6PVU7 CGN Cingulin 1 QPAQS(0.786)QNLS(0.137)PLS(0.075)GFS(0.002)R 78.069 0.026794 7296200 6337.2 5905.4 6692.9 6779.9 7283.9 7651.2 6529.5 5956.5 7723.9 9361.8 TRUE FALSE 6822.380904 5612.146423 6916.037946 6225.960482 6997.897487 7942.371777 5672.168807 6735.035002 8395.71086 9056.325233 0.753327727 0.61969356 0.763669344 0.687470947 0.772708279 0.87699719 0.626321235 0.743682987 0.92705492 1 13.14471005 -8.342623266 3.235642713 0.994085275 0.728203813 0.640823443 0.07080431 0.152610894 2.917520383 0.067530673 0.018379564 4.54E-09 8.342623266 -0.265881461 QPAQSQNLS(ph)PLSGFSR ddPTM_A459_MK2206_30min_R1 2 QPAQSQNLSPLSGFSR 16 0 A6PVU7;Q9P2M7-2;Q9P2M7 A6PVU7 CGN Cingulin 1 QPAQSQNLS(0.967)PLS(0.032)GFSR;QPAQSQNLS(0.999)PLS(0.001)GFSR 256.89 6.75E-39 17108600 1346.33 1302.85 1034.31 1041.6 1390.34 1203.46 1480.71 1035.96 1356.04 950.18 TRUE FALSE 1231.817564 1218.034228 964.103919 1121.824212 1334.959814 1271.598865 1381.934538 1026.902711 1497.005211 1067.895472 1.153500128 1.14059312 0.902807385 1.050500018 1.250084722 1.190752184 1.294072851 0.961613508 1.401827473 1 10.06055472 -6.243745365 23.07470654 1.187074534 1.056114421 0.157395668 0.136943796 536.9132852 700184.1271 0.038876553 0.050031978 5.70E-07 6.243745365 -0.130960113 QPAQSQNLS(ph)PLSGFSR ddPTM_A459_MK2206_30min_R2 2 QPAQSQNLSPLSGFSR 16 0 A6PVU7;Q9P2M7-2;Q9P2M7 A6PVU7 CGN Cingulin 1 QPAQS(0.114)QNLS(0.788)PLS(0.092)GFS(0.006)R;QPAQS(0.01)QNLS(0.986)PLS(0.005)GFSR 157.7 7.43E-05 16963600 15000.9 16591.8 18350.1 21153 17712.1 21421 24877 15819.2 15816.3 19072 TRUE FALSE 16149.38044 15767.87534 18961.88318 19424.73223 17016.63396 22236.19117 21610.62002 17886.82376 17191.97318 18449.6822 0.87532025 0.854642111 1.027762049 1.052849151 0.922326671 1.205234373 1.171327494 0.969492242 0.931830315 1 14.17130835 -5.285713231 5.772848336 1.042175733 0.864069503 0.372816147 0.087942521 0.173795711 20.21607036 0.024759954 0.055886225 5.18E-06 5.285713231 -0.17810623 QPASAQSTPSTTPHS(ph)SPK ddPTM_A459_MK2206_30min_R2 1 QPASAQSTPSTTPHSSPK 18 0 A0A087WT18;Q96A73-2;Q96A73 A0A087WT18 KIAA1191 Putative monooxygenase p33MONOX 1 QPASAQSTPSTT(0.001)PHS(0.755)S(0.244)PK 141.5 0.00020459 4514900 5448.5 10130 9012.6 11663 12134 11215 13806 9656.5 8726.2 9244.4 TRUE FALSE 5865.641349 9626.95893 9313.075586 10710.09559 11657.55819 11641.79468 11993.25562 10918.63771 9485.189103 8942.755985 0.655909807 1.076509182 1.041410008 1.19762807 1.303575566 1.301812853 1.341114041 1.22094774 1.060656147 1 13.1265038 -4.421358771 1.073275747 1.221556889 2.02E-14 0.667091793 0.111468544 1.988157719 1.121799591 0.03535193 3.327030125 3.79E-05 4.421358771 -1.221556889 QPASAQSTPSTTPHSS(ph)PK ddPTM_A459_MK2206_30min_R2 1 QPASAQSTPSTTPHSSPK 18 0 A0A087WT18;Q96A73-2;Q96A73 A0A087WT18 KIAA1191 Putative monooxygenase p33MONOX 1 QPASAQSTPSTTPHS(0.012)S(0.988)PK 190.63 1.53E-10 4114600 9427.9 14109 12310 14458 16656 12811 21055 14283 12533 17657 TRUE FALSE 10149.70727 13408.36758 12720.40926 13276.73515 16002.00175 13298.53158 18290.45321 16149.83714 13623.09769 17080.85354 0.594215462 0.784994002 0.744717425 0.777287571 0.936838532 0.778563645 1.070816114 0.945493567 0.797565394 1 14.06009245 -3.636118162 0.329664567 0.962601404 4.64E-10 0.584371419 0.086809277 10.85204962 0.526122962 0.083217479 4.825476409 0.000231144 3.636118162 -0.962601403 QPCPS(ph)ESDIITEEDK ddPTM_A459_MK2206_30min_R1 1 QPCPSESDIITEEDK 15 0 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 QPCPS(0.996)ES(0.004)DIITEEDK 131.48 0.00070661 1734100 1172.6 965.3 1375 1082.7 849.22 698.89 964.74 752.39 1238.5 861.28 TRUE FALSE 1072.864212 902.4587945 1281.668831 1166.089742 815.3937691 738.4605478 900.3839549 745.8119336 1367.246507 967.9818687 1.108351558 0.932309606 1.324062849 1.204660727 0.842364713 0.762886756 0.930166136 0.770481305 1.412471195 1 9.918836214 -6.257395814 24.96799681 0.930932225 1.140323337 0.179066816 0.195107698 567.9642458 3507029.954 0.058653275 0.072944679 5.53E-07 6.257395814 0.209391112 QPCPS(ph)ESDIITEEDK ddPTM_A459_MK2206_30min_R2 1 QPCPSESDIITEEDK 15 0 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 QPCPS(0.999)ES(0.001)DIITEEDK 221.13 1.83E-09 4367200 18594 15716 17525 12697 11086 11044 13879 13750 8912.8 13988 TRUE FALSE 20017.57094 14935.56629 18109.27475 11659.61448 10650.70794 11464.28716 12056.67063 15547.17221 9688.019233 13531.57271 1.479323311 1.103756867 1.338297857 0.861659967 0.787100522 0.847225035 0.891002908 1.148955302 0.715956633 1 13.72404191 -5.763227546 24.9985565 0.892916002 1.286789151 0.646849387 0.139937965 29.16039595 407672.6326 0.037958127 0.059746928 1.72E-06 5.763227546 0.393873149 QPCPS(ph)ESDIITEEDKSK ddPTM_A459_MK2206_30min_R1 1 QPCPSESDIITEEDKSK 17 1 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 QPCPS(0.983)ES(0.017)DIITEEDKSK 73.688 0.013498 6727300 1509.5 1379.3 1343.3 1223.2 1485.7 1275.8 1152.3 1297 1048.7 1202.4 TRUE FALSE 1381.109098 1289.507319 1252.120539 1317.411076 1426.521423 1348.034693 1075.432169 1285.660466 1157.716118 1351.36239 1.022012385 0.954227622 0.92656163 0.974876233 1.05561723 0.997537525 0.795813305 0.951380973 0.856702929 1 10.40019889 -7.158965617 24.30424541 0.896846556 0.986536325 0.334575774 0.060301457 33.15895147 7853.642096 0.022571897 0.017484117 6.93E-08 7.158965617 0.089689769 QPCPS(ph)ESDIITEEDKSK ddPTM_A459_MK2206_30min_R2 2 QPCPSESDIITEEDKSK 17 1 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 QPCPS(0.993)ES(0.007)DIITEEDKSK;QPCPS(0.967)ES(0.033)DIITEEDKSK 82.663 0.0077699 22511000 119865 121136 117608 119488 107732 81075 128850 99857 89065 112099 TRUE FALSE 129041.9566 115120.5624 121528.992 109725.4482 103501.9004 84160.36594 111931.8402 112908.6528 96811.71271 108441.2188 1.18997147 1.06159414 1.120690023 1.011842631 0.954451651 0.776092033 1.032189065 1.041196825 0.892757512 1 16.72655371 -5.914286801 2.561854761 0.947671319 1.121211185 0.504811759 0.077208132 0.250005503 3.326107912 0.024343859 0.039272943 1.22E-06 5.914286801 0.173539865 QPCPSES(ph)DIITEEDK ddPTM_A459_MK2206_30min_R2 1 QPCPSESDIITEEDK 15 0 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 QPCPS(0.02)ES(0.98)DIITEEDK 150.92 0.00025643 4810300 32789 27444 30107 24540 17369 16442 30272 20848 14694 23395 TRUE FALSE 35299.35105 26081.17087 31110.75235 22535.0035 16687.00579 17067.71183 26297.25004 23572.90518 15972.05756 22631.62307 1.559735727 1.152421582 1.374658471 0.995730772 0.737331377 0.754153239 1.161969248 1.041591454 0.705740702 1 14.46605243 -5.83510224 4.44751834 0.905116208 1.342812766 0.612071729 0.164499099 0.149582671 5.59394842 0.048188745 0.07500808 1.46E-06 5.83510224 0.437696558 QPDISCILGTGGKS(ph)PR ddPTM_A459_MK2206_30min_R1 1 QPDISCILGTGGKSPR 16 1 P57740;G3V1T4;P57740-2 P57740 NUP107 Nuclear pore complex protein Nup107 1 QPDIS(0.007)CILGT(0.094)GGKS(0.899)PR 67.785 0.027252 124750000 2431.9 3173.2 3097.2 2379.6 2488.6 2583.7 2644.1 2771.9 2953.3 2782.7 TRUE FALSE 2225.054135 2966.624103 2886.970693 2562.877204 2389.473792 2729.986861 2467.716913 2747.665571 3260.306103 3127.441884 0.711461385 0.948578491 0.923109301 0.819480361 0.764034595 0.872913698 0.789052844 0.878566468 1.042483354 1 11.61076736 -8.165574822 4.24845141 1.020907745 0.838824862 0.541669106 0.068020477 0.175456563 5.33105577 0.051964056 0.017757338 6.83E-09 8.165574822 -0.182082882 QPDISCILGTGGKS(ph)PR ddPTM_A459_MK2206_30min_R2 1 QPDISCILGTGGKSPR 16 1 P57740;G3V1T4;P57740-2 P57740 NUP107 Nuclear pore complex protein Nup107 1 QPDIS(0.002)CILGT(0.053)GGKS(0.945)PR 141.93 0.0018782 7672000 25143 31149 20768 21483 23289 17519 23466 15494 20962 18671 TRUE FALSE 27067.96741 29602.18595 21460.39475 19727.77018 22374.55684 18185.69782 20384.88601 17519.119 22785.23687 18061.7668 1.498633423 1.638941876 1.188166971 1.092239225 1.238780076 1.006861512 1.128620818 0.969955996 1.261517609 1 14.1406514 -5.352560905 4.299723124 1.10429987 1.568757334 0.783375147 0.096978637 0.08613152 2.786778437 0.024322041 0.054571716 4.44E-06 5.352560905 0.464457463 QPEDDSSQAFIS(ph)TQNGSPR ddPTM_A459_MK2206_30min_R2 1 QPEDDSSQAFISTQNGSPR 19 0 Q5TCQ9-3;Q5TCQ9-2;Q5TCQ9;Q5TCQ9-1 Q5TCQ9-3 MAGI3 "Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3" 1 QPEDDS(0.088)S(0.088)QAFIS(0.487)T(0.322)QNGS(0.015)PR 67.168 0.021216 22379000 13924 11772 11877 10949 13174 8456 14606 10419 9018 10895 TRUE FALSE 14990.03215 11187.4196 12272.97325 10054.43168 12656.72257 8777.799005 12688.21466 11780.79907 9802.369339 10539.49704 1.422272058 1.061475662 1.164474282 0.953976422 1.200884873 0.832847997 1.20387288 1.117776211 0.930060448 1 13.3635184 QPEDDSSQAFISTQNGS(ph)PR ddPTM_A459_MK2206_30min_R1 2 QPEDDSSQAFISTQNGSPR 19 0 Q5TCQ9-3;Q5TCQ9-2;Q5TCQ9;Q5TCQ9-1 Q5TCQ9-3 MAGI3 "Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3" 1 QPEDDSSQAFIS(0.019)T(0.062)QNGS(0.919)PR;QPEDDSSQAFIS(0.003)TQNGS(0.997)PR 265.27 5.40E-48 12832600 1548.66 1746.53 1481.12 1365.6 2009.11 1784.51 2063.44 1691.48 1430.18 1772.58 TRUE FALSE 1416.938335 1632.83058 1380.585701 1470.778749 1929.082894 1885.547414 1925.791683 1676.691569 1578.852329 1992.180593 0.711249944 0.81961976 0.693002284 0.738275814 0.96832732 0.94647414 0.966675255 0.841636333 0.792524701 1 10.96013272 -6.251141954 24.52397098 0.915084949 0.742790373 0.637614711 0.065958065 388.1729667 924457.7792 0.020487566 0.026144149 5.61E-07 6.251141954 -0.172294576 QPEDDSSQAFISTQNGS(ph)PR ddPTM_A459_MK2206_30min_R2 2 QPEDDSSQAFISTQNGSPR 19 0 Q5TCQ9-3;Q5TCQ9-2;Q5TCQ9;Q5TCQ9-1 Q5TCQ9-3 MAGI3 "Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3" 1 QPEDDSSQAFIST(0.004)QNGS(0.996)PR;QPEDDSSQAFIS(0.083)T(0.011)QNGS(0.906)PR 211.11 8.17E-31 17321000 44326.4 45857 46226 44897 50900 46801 50897 33790.3 37260.3 45111 TRUE FALSE 47720.06327 43579.80806 47767.15177 41228.77148 48901.41025 48582.04485 44214.16276 38206.80823 40501.13354 43639.03176 1.09351792 0.998642873 1.094596966 0.944768246 1.1205888 1.113270457 1.01317928 0.875519155 0.928094229 1 15.41333147 -7.575661562 5.941287066 0.927801321 1.057607352 0.48310047 0.05824848 0.16163262 12.40031838 0.02738158 0.015684277 2.66E-08 7.575661562 0.129806031 QPEKEEEEEAGES(ph)VEDIFSEVVGR ddPTM_A459_MK2206_30min_R1 1 QPEKEEEEEAGESVEDIFSEVVGR 24 1 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 QPEKEEEEEAGES(0.999)VEDIFS(0.001)EVVGR 115.06 8.32E-08 4546500 1051.2 1187.5 1099.6 961.16 916.56 613 1252.2 1020.1 1017.9 1069.3 TRUE FALSE 961.7899199 1110.193534 1024.962216 1035.18871 880.0514744 647.7075303 1168.668023 1011.181373 1123.714348 1201.772957 0.800309172 0.923796403 0.852875087 0.861384593 0.73229429 0.538959981 0.972453254 0.841407994 0.935047125 1 10.23094865 -8.174632865 1.349708908 0.989507858 0.803925604 0.260519558 0.109883885 0.644791488 2.194736427 0.108835999 0.034820011 6.69E-09 8.174632865 -0.185582254 QPEYS(ph)PESPR ddPTM_A459_MK2206_30min_R2 1 QPEYSPESPR 10 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QPEYS(0.5)PES(0.5)PR 100.02 0.01787 130930000 25151 27430 26372 33455 28350 26436 33029 23211 27330 20302 TRUE FALSE 27076.5799 26067.86609 27251.22932 30721.61948 27236.83655 27442.0405 28692.25263 26244.7574 29707.114 19639.5474 1.378676369 1.327315012 1.38756911 1.564273293 1.386836264 1.397284771 1.46094266 1.336321905 1.512617037 1 14.26147406 -10.92372821 6.713973828 0.999960595 1.415178008 0.754164503 0.071396363 4.20E-05 3.75E-06 0.06897768 0.016727963 1.19E-11 10.92372821 0.415217413 QPEYSPES(ph)PR ddPTM_A459_MK2206_30min_R1 4 QPEYSPESPR 10 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QPEYS(0.124)PES(0.876)PR;QPEYS(0.112)PES(0.888)PR;QPEYS(0.008)PES(0.992)PR;QPEYSPES(1)PR 159.58 0.00045645 530978000 8509 8849.1 9078 8338.4 8584.1 7885.2 9266.1 7922.7 8356.5 8107.5 TRUE FALSE 7785.264867 8273.021982 8461.810653 8980.625013 8242.17712 8331.65321 8647.975376 7853.432669 9225.188079 9111.918309 0.854404594 0.907934169 0.928653042 0.985591037 0.904549058 0.914368734 0.949083945 0.861885764 1.012430947 1 13.1535391 QPEYSPES(ph)PR ddPTM_A459_MK2206_30min_R2 4 QPEYSPESPR 10 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QPEYS(0.007)PES(0.993)PR;QPEYS(0.009)PES(0.991)PR;QPEYS(0.22)PES(0.779)PR;QPEYS(0.083)PES(0.917)PR 164.92 0.00036743 522995800 192568.3 154847.1 214332.4 207082.5 218128.3 177940.3 172833.6 174706.7 164156.9 187671.1 TRUE FALSE 207311.4771 147157.6182 221478.1352 190163.1973 209563.4869 184711.9428 150140.3407 197541.4655 178434.9704 181547.4074 1.14191373 0.810574055 1.219946561 1.047457521 1.154318257 1.017430904 0.827003497 1.088098521 0.982856065 1 17.4699868 -6.997416967 24.99431073 0.973314797 1.06861789 0.139230398 0.117489156 172.5739319 1669862.756 0.040774527 0.035744527 1.01E-07 6.997416967 0.095303093 QPGQVIGATTPSTGS(ph)PTNK ddPTM_A459_MK2206_30min_R2 3 QPGQVIGATTPSTGSPTNK 19 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 QPGQVIGATTPS(0.043)T(0.146)GS(0.625)PT(0.186)NK;QPGQVIGATTPS(0.025)T(0.01)GS(0.939)PT(0.025)NK;QPGQVIGATTPS(0.018)T(0.059)GS(0.911)PT(0.012)NK 249.26 8.62E-80 26275000 88308 96651.6 101019 97333.3 111758 92481 111427 88139.4 94223 126873 TRUE FALSE 95068.92838 91852.02209 104386.923 89380.85804 107369.8194 96000.42926 96796.50105 99659.52221 102418.3462 122733.1444 0.774598653 0.748388078 0.850519422 0.728253631 0.874823341 0.782188297 0.788674498 0.812001703 0.834479934 1 16.90516538 -14.52287875 0.229974363 2.090525072 0.776478758 0.700353352 0.04045761 85.24596433 0.850968365 43.19445884 0.066269169 3.00E-15 14.52287875 -1.314046314 QPGT(ph)CSPDLAAPLDENGAVDR ddPTM_A459_MK2206_30min_R2 1 QPGTCSPDLAAPLDENGAVDR 21 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 QPGT(0.503)CS(0.497)PDLAAPLDENGAVDR 102.67 0.00048398 3730700 11049 11108 8941.2 10295 10411 4562.4 11906 9266.8 10111 11584 TRUE FALSE 11894.91994 10556.39287 9239.295145 9453.865568 10002.21183 4736.025329 10342.7279 10478.00258 10990.4365 11206.01503 1.06147635 0.942029155 0.824494267 0.843642057 0.892575265 0.422632427 0.922962166 0.935033779 0.980762249 1 13.45198571 -10.6377089 14.97132044 0.999999999 0.86059389 0.05219431 0.162874368 0 0 0.16412105 0.039805202 2.30E-11 10.6377089 -0.139406109 QPGTCS(ph)PDLAAPLDENGAVDR ddPTM_A459_MK2206_30min_R2 2 QPGTCSPDLAAPLDENGAVDR 21 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 QPGT(0.274)CS(0.726)PDLAAPLDENGAVDR;QPGT(0.004)CS(0.996)PDLAAPLDENGAVDR 111.35 0.00010237 9640400 26233 19274.9 22429 21818 18045.5 20355.5 24137 18278.4 17961.6 26891 TRUE FALSE 28241.41865 18317.73649 23176.77167 20035.39961 17336.943 21130.14282 20967.78291 20667.44964 19523.8675 26013.54887 1.08564267 0.704161381 0.890950011 0.770190938 0.666458202 0.812274516 0.806033156 0.794487893 0.750526873 1 14.66697561 -4.750811368 24.99132526 0.791426365 1.08564329 0.47939271 0.089118604 366.7919262 862438.884 0.020678426 0.291623334 1.77E-05 4.750811368 0.294216925 QPGVDSLS(ph)PVASLPK ddPTM_A459_MK2206_30min_R2 2 QPGVDSLSPVASLPK 15 0 Q9UBW7;A0A087X151;Q9UBW7-2 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 1 QPGVDSLS(1)PVASLPK;QPGVDS(0.003)LS(0.997)PVASLPK 256.33 7.55E-30 24890000 81413 80122 90155 90643 88255 79379 101038 70572 70494 88159 TRUE FALSE 87646.04188 76143.25799 93160.7227 83237.17695 84789.66525 82399.82347 87771.58923 79796.00271 76625.4407 85282.37905 1.027715723 0.892836936 1.092379501 0.976018468 0.99422256 0.966199869 1.02918786 0.935668113 0.89849089 1 16.37996006 -7.784262398 24.85364225 0.93780957 0.994513079 0.161449675 0.053649417 375.1300844 408500.0909 0.027694658 0.013318456 1.64E-08 7.784262398 0.056703509 QPGYQPPNPHPGPS(ph)SPPAAPASK ddPTM_A459_MK2206_30min_R2 1 QPGYQPPNPHPGPSSPPAAPASK 23 0 Q9BUL9 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 1 QPGYQPPNPHPGPS(0.49)S(0.49)PPAAPAS(0.019)K 63.606 0.0036836 46650000 70206 74901 68802 77706 86067 82988 82686 63146 67280 80940 TRUE FALSE 75581.02534 71181.52526 71095.82434 71357.17123 82687.57713 86146.16649 71829.22888 71399.39901 73131.89279 78298.93443 0.965288045 0.90909954 0.908005005 0.911342814 1.056049839 1.100221441 0.917371729 0.911882129 0.934008787 1 16.25670505 -4.363825052 20.27203223 0.959506031 10.68502049 6.39E-06 0.06554968 10218.98896 1367169.125 0.017548847 230371.5205 4.33E-05 4.363825052 9.725514458 QPGYQPPNPHPGPSS(ph)PPAAPASK ddPTM_A459_MK2206_30min_R1 2 QPGYQPPNPHPGPSSPPAAPASK 23 0 Q9BUL9 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 1 QPGYQPPNPHPGPS(0.056)S(0.944)PPAAPASK;QPGYQPPNPHPGPS(0.105)S(0.778)PPAAPAS(0.116)K 123.19 6.92E-06 49330000 4070.8 3938.9 4133.4 3276.97 4676.6 4566.3 4758.4 4463.5 3779.76 3824.58 TRUE FALSE 3724.557083 3682.476894 3852.836324 3529.362797 4490.321119 4824.83996 4440.975818 4424.47609 4172.679578 4298.397845 0.866498918 0.85670918 0.89634242 0.821087979 1.044649956 1.122474032 1.033170027 1.029331451 0.970752296 1 12.0695833 -6.268650911 24.91768691 1.039305448 0.862497648 0.815556362 0.040295041 223.4511071 772079.3497 0.012960809 0.01500009 5.39E-07 6.268650911 -0.1768078 QPGYQPPNPHPGPSS(ph)PPAAPASK ddPTM_A459_MK2206_30min_R2 3 QPGYQPPNPHPGPSSPPAAPASK 23 0 Q9BUL9 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 1 QPGYQPPNPHPGPS(0.229)S(0.769)PPAAPAS(0.002)K;QPGYQPPNPHPGPS(0.291)S(0.664)PPAAPAS(0.045)K;QPGYQPPNPHPGPS(0.271)S(0.728)PPAAPAS(0.001)K 83.202 0.00024723 130271000 275012 319943 318395 368450 324346 317908 364176 273499 335401 375815 TRUE FALSE 296067.1302 304055.0959 329010.1304 338346.4564 311610.5463 330006.2117 316359.2537 309246.2584 364573.5727 363552.1873 0.814373123 0.836345115 0.904987349 0.930668191 0.857127414 0.907727207 0.870189383 0.850624117 1.00280946 1 18.47180295 -14.52287874 0.054992779 1.475231462 0.669702343 0.518440287 0.042822806 425.1255217 1.712326456 27.91021557 5.363972334 3.00E-15 14.52287874 -0.80552912 QPLFVPTTSGPS(ph)TPPGLVLPHTEFQPAPK ddPTM_A459_MK2206_30min_R2 1 QPLFVPTTSGPSTPPGLVLPHTEFQPAPK 29 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 QPLFVPT(0.065)T(0.065)S(0.065)GPS(0.401)T(0.401)PPGLVLPHT(0.002)EFQPAPK 49.141 0.021415 3543400 21625 26354 22668 23079 26010 22934 26624 22680 22942 27489 TRUE FALSE 23280.62663 25045.29868 23423.73981 21193.37187 24988.71671 23806.76944 23128.23682 25644.35387 24937.45369 26592.03618 0.875473637 0.941834559 0.880855443 0.796981913 0.939706781 0.895259366 0.869742981 0.964362176 0.937779022 1 14.69870663 -8.18296874 0.974261033 0.995720939 0.88467539 0.44042287 0.041227559 0.499228976 0.950990229 0.039308787 0.013994515 6.56E-09 8.18296874 -0.111045549 QPLLGPGLGPGLGAS(ph)WR ddPTM_A459_MK2206_30min_R2 1 QPLLGPGLGPGLGASWR 17 0 Q05BS2;Q96SL1-2;Q96SL1 Q05BS2 DIRC2 Disrupted in renal carcinoma protein 2 1 QPLLGPGLGPGLGAS(1)WR 101.28 0.0040491 3493000 6703.9 5867.7 8028 6370.5 7587.2 5512.4 7264.6 5620.6 4116.7 6412.7 TRUE FALSE 7217.155738 5576.31855 8295.649513 5850.009772 7289.288405 5722.178245 6310.749294 6355.231718 4474.763125 6203.454124 1.163409222 0.898905422 1.337262974 0.943024588 1.175037045 0.92241808 1.017296037 1.024466626 0.72133412 1 12.59885603 -7.297499085 0.958480011 0.89758315 1.097260635 0.23396343 0.142477262 0.848165494 1.502283782 0.102573153 0.057150097 5.04E-08 7.297499085 0.199677485 QPLLLS(ph)EDEEDTK ddPTM_A459_MK2206_30min_R1 4 QPLLLSEDEEDTK 13 0 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QPLLLS(0.995)EDEEDT(0.005)K;QPLLLS(1)EDEEDTK;QPLLLS(1)EDEEDTK;QPLLLS(1)EDEEDTK 183.41 0.00012044 60304000 4860.5 5371.7 5621.9 4450.44 3964.42 3762.9 4622.79 4123.78 4650.43 4885.4 TRUE FALSE 4447.088951 5022.001354 5240.301092 4793.21366 3806.508757 3975.952146 4314.412114 4087.726226 5133.85884 5490.640235 0.809939964 0.91464768 0.954406202 0.872979007 0.693272295 0.724132701 0.78577578 0.744489905 0.935020074 1 12.42275867 -4.406257026 13.0171875 0.834523593 0.000448814 0 0.101179547 1342624.615 2122130.416 0.026642262 32116004.13 3.92E-05 4.406257026 -0.834074778 QPLLLS(ph)EDEEDTK ddPTM_A459_MK2206_30min_R2 5 QPLLLSEDEEDTK 13 0 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QPLLLS(0.747)EDEEDT(0.253)K;QPLLLS(1)EDEEDTK;QPLLLS(1)EDEEDTK;QPLLLS(1)EDEEDTK;QPLLLS(0.996)EDEEDT(0.004)K 174.39 0.00012463 28593800 87259 68668.4 71470 67096.5 75633.5 50944 86707 58407.8 56087.9 84778 TRUE FALSE 93939.61613 65258.42711 73852.77413 61614.50132 72663.74876 52882.70962 75322.26675 66041.9 60966.32416 82011.7008 1.145441629 0.795720933 0.90051509 0.751289154 0.886016849 0.644819082 0.918433175 0.805274118 0.743385682 1 16.32354214 -4.758831025 24.98340071 0.820084664 1.145442063 0.488253863 0.097470305 55.22043039 528806.4064 0.022268066 0.148215022 1.74E-05 4.758831025 0.325357399 QPLLLS(ph)EDEEDTKR ddPTM_A459_MK2206_30min_R1 16 QPLLLSEDEEDTKR 14 1 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(0.998)EDEEDT(0.002)KR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(0.998)EDEEDT(0.002)KR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR 268.92 5.34E-44 8639019100 52683.2 62310.55 59133.84 50482.75 48820.61 44697.4 52078.96 52905.94 52957.97 52666.87 TRUE FALSE 48202.21719 58254.12187 55119.9997 54370.94015 46875.98172 47228.12816 48604.8676 52443.38894 58463.14049 59191.63947 0.814341647 0.984161317 0.931212587 0.918557767 0.791935857 0.797885117 0.821144135 0.885993181 0.987692536 1 15.8531058 -8.248939691 3.977263981 0.998801138 0.868396176 0.416481337 0.059904725 0.237192513 8.438975273 0.057173732 0.01728303 5.64E-09 8.248939691 -0.130404962 QPLLLS(ph)EDEEDTKR ddPTM_A459_MK2206_30min_R2 12 QPLLLSEDEEDTKR 14 1 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QPLLLS(1)EDEEDTKR;QPLLLS(0.988)EDEEDT(0.012)KR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(0.992)EDEEDT(0.008)KR;QPLLLS(1)EDEEDTKR;QPLLLS(0.95)EDEEDT(0.05)KR;QPLLLS(1)EDEEDTKR;QPLLLS(0.999)EDEEDT(0.001)KR;QPLLLS(0.831)EDEEDT(0.169)KR 151.49 0.00071965 8574616200 1747013 2118693 1943707 1976208 1915693 1549155 2091210 1553645 1666111 2319709 TRUE FALSE 1880765.659 2013481.786 2008509.221 1814745.485 1840473.267 1608109.179 1816631.615 1756711.736 1811026.323 2244017.085 0.838124483 0.897266692 0.895050771 0.808703952 0.820169008 0.716620738 0.809544467 0.782842407 0.807046584 1 21.09765223 -5.770639725 24.1827295 0.806831568 0.878859248 0.097748519 0.069625167 205.3375493 539722.8391 0.018404133 0.02775709 1.70E-06 5.770639725 0.07202768 QPLLLSEDEEDT(ph)KR ddPTM_A459_MK2206_30min_R1 1 QPLLLSEDEEDTKR 14 1 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QPLLLS(0.353)EDEEDT(0.647)KR 154.13 0.044723 70621000 3954 3850.5 4485.9 3463 3373.4 2918.7 3371.8 3766.9 3881.3 3566.3 TRUE FALSE 3617.691537 3599.83175 4181.409606 3729.72086 3239.030335 3083.954272 3146.873374 3733.96639 4284.775024 4008.120168 0.902590587 0.898134686 1.043234592 0.930541177 0.808117072 0.7694266 0.785124508 0.93160041 1.069023593 1 11.96871005 -8.073517172 5.062332266 1.029453472 0.877877183 0.396978821 0.076801861 0.263780433 12.25412067 0.062052224 0.022820564 8.44E-09 8.073517172 -0.151576289 QPLLLSEDEEDTKR ddPTM_A459_MK2206_30min_R1 2 QPLLLSEDEEDTKR 14 1 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 0 ; 127.03 0.001691 19790000 3530.9 3310.9 3840.6 3246.3 3385.9 3361.9 3852.9 3799.7 3566.3 2948.8 FALSE TRUE 3230.578414 3095.359808 3579.910773 3496.330588 3251.032433 3552.247873 3595.880071 3766.479623 3937.029647 3314.119606 0.974792342 0.93399158 1.08019963 1.054980207 0.980964123 1.071852647 1.085018194 1.136494777 1.187956415 1 11.69440995 -7.085576512 1.853643452 1.118391372 1.007278004 0.366655774 0.059304043 0.368009103 2.50891105 0.028793673 0.02069863 8.21E-08 7.085576512 -0.111113368 QPLPPLHPAVSDPRS(ph)PPSQK ddPTM_A459_MK2206_30min_R2 1 QPLPPLHPAVSDPRSPPSQK 20 1 O14647 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 1 QPLPPLHPAVS(0.177)DPRS(0.795)PPS(0.028)QK 59.252 0.014125 3476200 27229 42976 40155 40549 42754 32620 41096 31887 31643 35336 TRUE FALSE 29313.67318 40841.87433 41493.74766 37236.01699 41075.26314 33861.37696 35700.04583 36054.74038 34395.25094 34182.98921 0.857551485 1.194801136 1.213871245 1.089314242 1.201628766 0.990591453 1.044380455 1.054756802 1.006209572 1 15.06099094 -6.780246676 24.9467646 1.024184498 1.120527093 0.180222126 0.097116789 411.5930509 545950.3772 0.033862714 0.029912967 1.66E-07 6.780246676 0.096342594 QPLSEASNQQPLS(ph)GGEEK ddPTM_A459_MK2206_30min_R1 1 QPLSEASNQQPLSGGEEK 18 0 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 QPLSEASNQQPLS(1)GGEEK 228.08 1.05E-18 6658100 2088.3 2227.8 2333.8 2037.5 1609.2 1618.8 2059.4 1732.5 2122.7 2093 TRUE FALSE 1910.679119 2082.769815 2175.388158 2194.428603 1545.102156 1710.455057 1922.021184 1717.352935 2343.362261 2352.296641 0.812261126 0.885419712 0.924793294 0.9328877 0.656848345 0.727142584 0.817082824 0.730074985 0.996201848 1 11.19985429 -8.279623913 23.8674181 0.998101075 0.813456876 0.441971495 0.084136136 544.62875 714819.8514 0.08875534 0.023137132 5.25E-09 8.279623913 -0.184644199 QPLSEASNQQPLS(ph)GGEEK ddPTM_A459_MK2206_30min_R2 4 QPLSEASNQQPLSGGEEK 18 0 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 QPLSEASNQQPLS(1)GGEEK;QPLS(0.009)EAS(0.025)NQQPLS(0.966)GGEEK;QPLSEASNQQPLS(1)GGEEK;QPLSEASNQQPLS(1)GGEEK 239.87 5.25E-25 24789400 97483 89316 103835 83546 96752 78340 124407 83368 80268 123265 TRUE FALSE 104946.3734 84880.69732 107296.8071 76720.02455 92953.03034 81321.2836 108072.2115 94264.48385 87249.56555 119242.8731 0.880106045 0.71183036 0.899817358 0.643392955 0.779526926 0.681980243 0.906320089 0.790525097 0.73169627 1 16.86354352 -10.47379027 9.806437319 0.999999305 0.779087619 0.363891983 0.087012566 5.67E-11 0 0.079747237 0.019341546 3.36E-11 10.47379027 -0.220911685 QPLTS(ph)PGSVSPSR ddPTM_A459_MK2206_30min_R2 1 QPLTSPGSVSPSR 13 0 Q08495;Q08495-2;E5RGQ0;E5RJ61;A0A087WT94 Q08495 DMTN Dematin 1 QPLT(0.092)S(0.878)PGS(0.03)VS(0.001)PSR 85.287 0.028007 3210000 11427 12318 10580 12526 13966 12851 11418 11817 8953.5 13248 TRUE FALSE 12301.85991 11706.30603 10932.73192 11502.58573 13417.62467 13340.05381 9918.802885 13361.52247 9732.259246 12815.71884 0.95990401 0.913433431 0.853072079 0.897537303 1.046966216 1.040913426 0.77395603 1.042588608 0.759400184 1 13.64562678 -4.026590829 3.743981111 0.926502475 3.401012505 0.009966259 0.102024868 2002.458515 360.8036391 0.024913745 41133.30206 9.41E-05 4.026590829 2.47451003 QPLTSPGSVS(ph)PSR ddPTM_A459_MK2206_30min_R2 2 QPLTSPGSVSPSR 13 0 Q08495;Q08495-2;E5RGQ0;E5RJ61;A0A087WT94 Q08495 DMTN Dematin 1 QPLT(0.027)S(0.012)PGS(0.033)VS(0.464)PS(0.464)R;QPLTSPGS(0.026)VS(0.914)PS(0.06)R 127.07 0.001964 23515100 31007 25465 22062.1 32284 26875 26065 32034 25470 21737 36941 TRUE FALSE 33380.91976 24200.44513 22797.6394 29646.29393 25819.75246 27056.92184 27827.89732 28799.01645 23627.64497 35735.6182 0.934107802 0.677207961 0.637952848 0.829600702 0.7225215 0.757141564 0.778715991 0.805891094 0.661179131 1 15.12507513 -10.6723574 3.957828379 1.000102296 0.753587866 0.431667858 0.083937428 115664295.7 213893500.9 156022.2908 0.020186878 2.13E-11 10.6723574 -0.24651443 QPLTSPGSVSPS(ph)R ddPTM_A459_MK2206_30min_R2 1 QPLTSPGSVSPSR 13 0 Q08495;Q08495-2;E5RGQ0;E5RJ61;A0A087WT94 Q08495 DMTN Dematin 1 QPLTSPGSVS(0.022)PS(0.978)R 123.63 0.0024168 4575800 10533 11606 12668 13631 11876 12600 14647 10504 9261.6 13931 TRUE FALSE 11339.41458 11029.66292 13090.3448 12517.3037 11409.68857 13079.50183 12723.83131 11876.90887 10067.15723 13476.43261 0.841425539 0.818440847 0.971350889 0.928829169 0.846640123 0.970546302 0.944154263 0.881309558 0.747019446 1 13.71815103 -5.234123041 24.73036239 0.908608171 0.829933165 0.177467551 0.069827059 1174.190665 1063028.155 0.017819822 0.047122597 5.83E-06 5.234123041 -0.078675007 QPPGPVPT(ph)PPLPSER ddPTM_A459_MK2206_30min_R1 3 QPPGPVPTPPLPSER 15 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QQI0 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 QPPGPVPT(0.5)PPLPS(0.5)ER;QPPGPVPT(0.863)PPLPS(0.137)ER;QPPGPVPT(0.974)PPLPS(0.026)ER 108.66 0.0092116 31181900 1557.13 1369.01 1353.3 987.64 1376.67 1374.23 1613.31 1481.72 1311.34 1557.93 TRUE FALSE 1424.687917 1279.8872 1261.441767 1063.708204 1321.834319 1452.037715 1505.689034 1468.765478 1447.658486 1750.93813 0.813671193 0.730972259 0.720437658 0.60750759 0.754929198 0.829291275 0.859932746 0.838844876 0.826790199 1 10.77391239 -6.781306071 2.867262964 0.86541309 0.715858359 0.563084306 0.065104614 0.212154064 3.579684963 0.024383345 0.022383732 1.65E-07 6.781306071 -0.149554731 QPPGTQQSHS(ph)SPGEITSSPQGLDNPALLR ddPTM_A459_MK2206_30min_R1 1 QPPGTQQSHSSPGEITSSPQGLDNPALLR 29 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 QPPGT(0.001)QQS(0.002)HS(0.935)S(0.062)PGEITSSPQGLDNPALLR 129.62 7.12E-14 15492000 586.25 951.78 746.58 600 848.57 692.83 653.14 854.62 924.99 762.23 TRUE FALSE 536.386359 889.818949 695.9042297 646.212104 814.76966 732.0574359 609.5702223 847.1481474 1021.146021 856.6608069 0.626136219 1.038706267 0.812345124 0.754338355 0.951099494 0.854547599 0.711565438 0.988895652 1.192007399 1 9.742580275 -7.974756109 6.703867198 1.095135354 0.833489385 0.47568814 0.118096546 0.13171038 21.42135815 0.064074079 0.029522355 1.06E-08 7.974756109 -0.26164597 QPPGTQQSHS(ph)SPGEITSSPQGLDNPALLR ddPTM_A459_MK2206_30min_R2 1 QPPGTQQSHSSPGEITSSPQGLDNPALLR 29 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 QPPGT(0.001)QQS(0.01)HS(0.955)S(0.034)PGEITSSPQGLDNPALLR 110.78 4.83E-11 7468700 4932.9 5416.3 5073.1 5734.1 5199.1 5667.1 4909.8 4292.1 4641.6 6794.1 TRUE FALSE 5310.566617 5147.334418 5242.234622 5265.605688 4994.957211 5882.765462 4265.137362 4853.092207 5045.317978 6572.409073 0.808009142 0.783173165 0.797612346 0.801168282 0.759988789 0.895069889 0.648945815 0.738403857 0.76765124 1 12.68220656 -7.229670101 24.99698515 0.766950382 0.80350031 0 0.089333353 2639.985549 2077220.214 0.032133123 0.024887817 5.89E-08 7.229670101 0.036549929 QPPGTQQSHSS(ph)PGEITSSPQGLDNPALLR ddPTM_A459_MK2206_30min_R1 1 QPPGTQQSHSSPGEITSSPQGLDNPALLR 29 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 QPPGT(0.002)QQS(0.004)HS(0.264)S(0.729)PGEITSSPQGLDNPALLR 85.76 2.84E-06 18317000 1112.4 1087.6 1103.5 1113.1 1311.5 991.21 1209.1 1095.9 1172.7 1107.6 TRUE FALSE 1017.784539 1016.797042 1028.597495 1198.831155 1259.260178 1047.331454 1128.443145 1086.318662 1294.606362 1244.81785 0.817617243 0.816823957 0.826303619 0.963057491 1.011601961 0.841353178 0.906512664 0.872672787 1.039996624 1 10.28171894 -1.561313811 0.225463869 0.980334566 1.40E-17 0.427550001 0.062608639 55.48624642 0.729954695 0.100566505 19.87566087 0.027459093 1.561313811 -0.980334566 QPPGTQQSHSS(ph)PGEITSSPQGLDNPALLR ddPTM_A459_MK2206_30min_R2 3 QPPGTQQSHSSPGEITSSPQGLDNPALLR 29 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 QPPGTQQS(0.003)HS(0.21)S(0.786)PGEITSSPQGLDNPALLR;QPPGTQQS(0.001)HS(0.055)S(0.944)PGEITSSPQGLDNPALLR;QPPGTQQS(0.001)HS(0.224)S(0.775)PGEITSSPQGLDNPALLR 136.88 4.50E-14 50891000 35069.9 44545.9 41949.6 37987.5 40323.1 42781.4 44244.3 33181.9 40375.3 44344.1 TRUE FALSE 37754.87851 42333.81538 43348.17873 34883.79973 38739.81249 44409.47616 38434.97026 37518.88826 43887.07061 42897.15565 0.880125452 0.986867655 1.010514056 0.813196101 0.903085808 1.035254564 0.895979458 0.874624149 1.023076471 1 15.38859437 QPPGVPNGPS(ph)SPTNESAPELPQR ddPTM_A459_MK2206_30min_R2 1 QPPGVPNGPSSPTNESAPELPQR 23 0 Q8TF74-2;Q8TF74 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 QPPGVPNGPS(0.533)S(0.378)PT(0.063)NES(0.026)APELPQR 93.179 7.28E-05 21873000 40409 51118 62936 47267 49801 59611 46990 35459 40083 44660 TRUE FALSE 43502.74411 48579.55445 65034.25483 43405.1349 47845.56251 61879.53838 40820.15655 40093.61305 43569.34689 43202.74786 1.006943916 1.124455199 1.505326815 1.004684587 1.107465726 1.432305616 0.944850931 0.928033864 1.008485549 1 15.39883546 -7.323702976 24.99971475 0.964345075 1.194795118 0.337165837 0.155487511 275.5030646 110617.1822 0.065699896 0.044294866 4.75E-08 7.323702976 0.230450044 QPPGVPNGPSS(ph)PTNESAPELPQR ddPTM_A459_MK2206_30min_R1 2 QPPGVPNGPSSPTNESAPELPQR 23 0 Q8TF74-2;Q8TF74 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 QPPGVPNGPS(0.126)S(0.838)PT(0.036)NESAPELPQR;QPPGVPNGPS(0.018)S(0.974)PT(0.008)NESAPELPQR 118.9 7.06E-06 27944000 3503.3 3562.6 3957.7 2872.4 3756.4 3258.2 3511.3 3471.9 2840.9 3088.6 TRUE FALSE 3205.325938 3330.674092 3689.062351 3093.632746 3606.774634 3442.676468 3277.067584 3441.545544 3136.221721 3471.239086 0.923395323 0.959505816 1.062750868 0.891218573 1.039045293 0.991771636 0.944062769 0.991445838 0.903487672 1 11.76123502 -10.40863434 11.76386251 1 0.970583887 0.030058892 0.052838875 0 0 0.048580953 0.011782612 3.90E-11 10.40863434 -0.029416113 QPPMFS(ph)PLISAR ddPTM_A459_MK2206_30min_R1 1 QPPMFSPLISAR 12 0 A0A087WVF7;Q9NZM3-2;Q9NZM3;Q9NZM3-4;Q9NZM3-3;F8W719;E7EPJ2 A0A087WVF7 ITSN2 Intersectin-2 1 QPPMFS(0.998)PLIS(0.002)AR 86.944 0.029195 14307000 8711.7 11502 12574 10548 9106.1 8708.2 9231.7 10013 11731 10915 TRUE FALSE 7970.724168 10753.21771 11720.51191 11360.40879 8743.384755 9201.250759 8615.870137 9925.457397 12950.47943 12267.2326 0.649757319 0.876580567 0.955432435 0.926077556 0.712743048 0.750067359 0.702348314 0.80910322 1.0556969 1 13.5825222 -8.255785653 23.77983559 1.027848474 0.802319277 0.484639365 0.094813024 201.5402654 847705.7962 0.074395905 0.026301869 5.55E-09 8.255785653 -0.225529198 QPPMFS(ph)PLISAR ddPTM_A459_MK2206_30min_R2 2 QPPMFSPLISAR 12 0 A0A087WVF7;Q9NZM3-2;Q9NZM3;Q9NZM3-4;Q9NZM3-3;F8W719;E7EPJ2 A0A087WVF7 ITSN2 Intersectin-2 1 QPPMFS(0.997)PLIS(0.003)AR;QPPMFS(0.993)PLIS(0.007)AR 132.31 0.0019018 27877000 13119.9 25212 15533.8 21837 16936 24686 23199 18168.8 18675.1 22685 TRUE FALSE 14124.36963 23960.00874 16051.68914 20052.84725 16271.00754 25625.44303 20152.94343 20543.52454 20299.42644 21944.79031 0.643632016 1.091831291 0.73145785 0.913786232 0.741451949 1.167723303 0.918347505 0.936145858 0.925022575 1 14.42159086 -6.735819153 24.99990349 0.981013414 0.839086339 0.278014909 0.131558029 340.7721049 332520.4674 0.041070109 0.041056056 1.84E-07 6.735819153 -0.141927076 QPPPLAPQS(ph)PQGGVMGGSNSNQQQQMR ddPTM_A459_MK2206_30min_R2 1 QPPPLAPQSPQGGVMGGSNSNQQQQMR 27 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8;H0YCI3;P46937-4 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QPPPLAPQS(0.998)PQGGVMGGS(0.001)NS(0.001)NQQQQMR 47.225 0.030558 5811200 6061.7 7477.8 7818.9 5875.7 5224.5 6924.2 7525.1 6310.7 6714 6522.6 TRUE FALSE 6525.788413 7106.463326 8079.578224 5395.636515 5019.359879 7187.705283 6537.045331 7135.530158 7297.971584 6309.768096 1.034235857 1.126263789 1.280487349 0.855124377 0.795490389 1.139139375 1.036019903 1.13087043 1.156614866 1 12.62337127 -10.3726038 15.1876013 1.000016033 1.059592195 0.017758367 0.136681001 0 0 0.141376613 0.034288865 4.24E-11 10.3726038 0.059576162 QPPTAAGRPVDAS(ph)PR ddPTM_A459_MK2206_30min_R2 1 QPPTAAGRPVDASPR 15 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 QPPT(0.034)AAGRPVDAS(0.966)PR 111.7 0.015143 5201100 8039.5 7099.3 6454 6247.6 6642.7 6187.1 8321.8 4692.9 7211.1 7994.7 TRUE FALSE 8655.010301 6746.759085 6669.173139 5737.151095 6381.874221 6422.554426 7229.137664 5306.278143 7838.308443 7733.833594 1.119109973 0.872369311 0.862337295 0.741824999 0.825188976 0.830449007 0.934741817 0.686112273 1.013508805 1 12.91696801 -4.754067606 3.954291565 0.847385386 1.152469796 0.372883207 0.098329194 0.255186184 7.241917114 0.02285726 0.233796312 1.76E-05 4.754067606 0.30508441 QPPVS(ph)PGTALVGSQK ddPTM_A459_MK2206_30min_R2 2 QPPVSPGTALVGSQK 15 0 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 QPPVS(0.994)PGT(0.005)ALVGS(0.001)QK;QPPVS(0.997)PGT(0.003)ALVGSQK 114.56 0.0024857 12748700 83540 39488 42580 43002 36754 32675 58493 42660 27395 59038 TRUE FALSE 89935.88663 37527.08334 43999.59595 39488.59904 35310.85329 33918.47002 50812.79884 48235.80847 29777.76758 57111.59489 1.574739539 0.657083442 0.770414415 0.691428757 0.618278186 0.593898141 0.889710731 0.844588714 0.521396183 1 15.80149605 -4.758699789 24.99950555 0.724022296 1.574740675 0.76612354 0.1396494 33.91244392 309400.923 0.033548159 0.225212707 1.74E-05 4.758699789 0.850718379 QPPVYCTS(ph)PDFK ddPTM_A459_MK2206_30min_R1 2 QPPVYCTSPDFK 12 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 QPPVYCT(0.155)S(0.845)PDFK;QPPVYCT(0.073)S(0.927)PDFK 107.93 0.0082753 9057400 3769 3490.5 3620 2982.2 3319.3 3175.5 3661.2 4018.9 3646.7 3394.1 TRUE FALSE 3448.426758 3263.267816 3374.284486 3211.889561 3187.085252 3355.294066 3416.968028 3983.763181 4025.787515 3814.586732 0.904010578 0.855470866 0.884574063 0.842001975 0.835499486 0.879595694 0.895763622 1.044349876 1.055366622 1 11.89731105 -7.701158534 4.086619252 1.03898967 0.866285354 0.908508889 0.023682938 0.057130229 1.906451796 0.01262553 0.006645391 1.99E-08 7.701158534 -0.172704316 QPPVYCTS(ph)PDFK ddPTM_A459_MK2206_30min_R2 2 QPPVYCTSPDFK 12 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 QPPVYCT(0.121)S(0.879)PDFK;QPPVYCT(0.207)S(0.793)PDFK 111.72 0.0066805 11789400 66192 73230 62723 61358 70494 48993 79210 49017 53415 70098 TRUE FALSE 71259.71041 69593.50469 64814.15351 56344.85513 67726.05136 50857.46295 68809.63185 55423.6902 58060.94015 67810.708 1.050862209 1.026290784 0.95581001 0.83091383 0.998751574 0.749991623 1.014731064 0.817329473 0.856220822 1 16.04922549 -5.402722405 2.885107623 0.890851224 1.042005403 0.314582729 0.083495152 0.288762693 4.554742293 0.021360858 0.052920328 3.96E-06 5.402722405 0.151154179 QPPYQLRPSLFVLS(ph)PIKEPAK ddPTM_A459_MK2206_30min_R1 1 QPPYQLRPSLFVLSPIKEPAK 21 2 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 QPPY(0.007)QLRPS(0.05)LFVLS(0.944)PIKEPAK 42.254 0.046198 21387000 6030.2 6482.7 6511.1 5820.6 5065.4 4006 5401 5464.8 5953.4 5752.4 TRUE FALSE 5517.299824 6060.675052 6069.144673 6268.903621 4863.634392 4232.816258 5040.709145 5417.02183 6572.277234 6465.05074 0.853403948 0.937452047 0.93876211 0.96966039 0.752296399 0.654722821 0.779685937 0.837893165 1.016585561 1 12.65844598 -6.25326856 24.85168672 0.819792678 0.926717831 0.115454708 0.106028952 1048.939594 3190364.192 0.032985834 0.04183313 5.58E-07 6.25326856 0.106925153 QPS(ph)DASETTGLVQR ddPTM_A459_MK2206_30min_R1 1 QPSDASETTGLVQR 14 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 QPS(0.975)DAS(0.018)ET(0.006)TGLVQR 106.19 0.0087225 0 524.06 716.39 419.49 438.88 591.14 393.41 585.08 544.35 323 421.22 TRUE FALSE 479.4859451 669.7528808 391.0161876 472.6826136 567.593642 415.6845342 546.0503807 539.5908053 356.5770059 473.4039136 1.012847446 1.414759915 0.825967374 0.998476354 1.198962716 0.87807583 1.153455569 1.139810614 0.753219387 1 8.886927823 -1.522880075 0.256981095 0.979056216 2.174178564 0.065773764 0.180003045 146.2935723 2.010327442 0.220143221 76.26731043 0.029999908 1.522880075 1.195122348 QPS(ph)EEEIIK ddPTM_A459_MK2206_30min_R1 2 QPSEEEIIK 9 0 Q15121-2;Q15121;B1AKZ5 Q15121-2 PEA15 Astrocytic phosphoprotein PEA-15 1 QPS(1)EEEIIK;QPS(1)EEEIIK 137.95 0.0025091 83602000 7274 7350.7 7357.1 7313.9 7195.4 6950.6 6225 6402.8 6697.8 5365.2 TRUE FALSE 6655.308103 6872.168094 6857.72055 7877.217845 6908.791981 7344.136965 5809.741608 6346.820995 7394.060278 6029.881481 1.103721213 1.139685434 1.137289443 1.306363628 1.145759167 1.217957101 0.963491841 1.052561483 1.22623642 1 12.55791393 -7.240450124 24.8622507 1.064952541 1.176428439 0.314704341 0.082701743 982.7175698 1164053.256 0.032054261 0.024799588 5.75E-08 7.240450124 0.111475897 QPS(ph)EEEIIK ddPTM_A459_MK2206_30min_R2 4 QPSEEEIIK 9 0 Q15121-2;Q15121;B1AKZ5 Q15121-2 PEA15 Astrocytic phosphoprotein PEA-15 1 QPS(1)EEEIIK;QPS(1)EEEIIK;QPS(1)EEEIIK;QPS(1)EEEIIK 125.54 0.0050193 444427000 156708 237099 172125 182997 189041 169187 224938 202036 225943 142264 TRUE FALSE 168705.685 225325.0084 177863.5616 168045.5597 181618.3005 175625.5298 195403.3704 228442.7989 245595.1137 137621.9373 1.22586332 1.637275371 1.292407047 1.221066663 1.319690044 1.276144874 1.419856268 1.65993012 1.7845637 1 17.07035093 -7.54229773 8.456436425 1.541879222 1.336736637 0.070060121 0.220996638 0.384364145 136.6593379 0.099271472 0.058068206 2.87E-08 7.54229773 -0.205142585 QPS(ph)PFVDDCK ddPTM_A459_MK2206_30min_R2 1 QPSPFVDDCK 10 0 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 QPS(1)PFVDDCK 99.941 0.017956 5458500 28676 31563 29022 29768 33518 27041 36705 28980 26300 44749 TRUE FALSE 30871.45661 29995.62732 29989.57899 27335.85918 32201.91491 28070.0642 31885.58941 32767.7855 28587.52646 43288.84379 0.713150408 0.692918191 0.692778471 0.631475844 0.743884846 0.64843645 0.736577525 0.756956819 0.66039016 1 15.40170765 -14.52287875 0.363067105 4.800942131 0.689893876 0.837028415 0.039975702 180.0918868 1.42190689 535.5285979 0.027830872 3.00E-15 14.52287875 -4.111048255 QPS(ph)PIVPALQNK ddPTM_A459_MK2206_30min_R1 1 QPSPIVPALQNK 12 0 Q1MSJ5;Q1MSJ5-1;Q1MSJ5-2 Q1MSJ5 CSPP1 Centrosome and spindle pole-associated protein 1 1 QPS(1)PIVPALQNK 96.82 0.016769 7826000 884.84 902.21 875.79 900 1081.5 863.68 1043.2 1084 848.61 871.59 TRUE FALSE 809.5797115 843.475965 816.3438149 969.3181559 1038.421565 912.5808152 973.6100314 1074.522702 936.8260463 979.5691494 0.826465096 0.861068323 0.833370279 0.989535202 1.060079899 0.931614492 0.993916593 1.096933997 0.956365405 1 9.936003528 -5.793163551 5.600935974 1.00804541 0.841740915 0.735915881 0.044978278 0.087120389 7.312804935 0.012640169 0.019680507 1.61E-06 5.793163551 -0.166304495 QPS(ph)PIVPALQNK ddPTM_A459_MK2206_30min_R2 3 QPSPIVPALQNK 12 0 Q1MSJ5;Q1MSJ5-1;Q1MSJ5-2 Q1MSJ5 CSPP1 Centrosome and spindle pole-associated protein 1 1 QPS(1)PIVPALQNK;QPS(1)PIVPALQNK;QPS(1)PIVPALQNK 131.32 0.0020419 14270300 44287 60470 57992 60825 56152 48734 59922 51243 48993 57407 TRUE FALSE 47677.64677 57467.14773 59925.42434 55855.40293 53947.19034 50588.60652 52054.16942 57940.63604 53254.32258 55533.81429 0.858533623 1.034813626 1.079079928 1.005790862 0.971429588 0.910951412 0.937341872 1.043339752 0.958953086 1 15.76107887 -3.866069567 14.99735196 0.982873574 0.990713237 0 0.063117049 0 0 0.01487933 0 0.000136123 3.866069567 0.007839663 QPS(ph)PSHDGS(ph)LSPLQDR ddPTM_A459_MK2206_30min_R1 1 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 2 QPS(0.999)PS(0.001)HDGS(0.669)LS(0.331)PLQDR 131.86 0.002666 32339000 2575 2309 2263.2 2081.1 2712.8 2520.2 3383.7 2273.1 1796.5 1862.1 TRUE FALSE 2355.982728 2158.68368 2109.58029 2241.386683 2604.743432 2662.891546 3157.979547 2253.226526 1983.252604 2092.791006 1.125761111 1.031485549 1.008022437 1.071003591 1.244626637 1.272411597 1.508979892 1.076661033 0.947659178 1 11.03121253 -6.180993574 5.911251639 1.200226188 1.051512501 0.110221156 0.151543749 0.450108537 26.07947176 0.047878979 0.062078157 6.59E-07 6.180993574 -0.148713688 QPS(ph)PSHDGSLS(ph)PLQDR ddPTM_A459_MK2206_30min_R1 2 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 2 QPS(1)PSHDGS(0.497)LS(0.503)PLQDR;QPS(0.995)PS(0.005)HDGSLS(1)PLQDR 183.39 1.59E-05 66973000 6709 5182 6275.8 5732.8 7471.1 6996 7607.8 6271.6 4938 5752.4 TRUE FALSE 6138.36432 4844.650858 5849.816181 6174.341249 7173.510267 7392.107474 7100.297543 6216.768062 5451.322771 6465.05074 0.949468854 0.749360067 0.904836855 0.955033688 1.10958298 1.143395121 1.098258595 0.961596175 0.84319876 1 12.65844598 -5.824444526 2.693839479 1.032950289 0.848823567 0.362132172 0.09334518 0.28516324 4.204495234 0.029698238 0.050681208 1.50E-06 5.824444526 -0.184126721 QPS(ph)PSHDGSLS(ph)PLQDR ddPTM_A459_MK2206_30min_R2 3 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 2 QPS(0.99)PS(0.01)HDGS(0.117)LS(0.883)PLQDR;QPS(0.74)PS(0.246)HDGS(0.051)LS(0.963)PLQDR;QPS(0.992)PS(0.008)HDGS(0.003)LS(0.997)PLQDR 206.45 1.45E-06 196229000 121588 143124 141105 152567 160425 146505 160908 129629 131959 157485 TRUE FALSE 130896.8708 136016.6703 145809.3703 140101.7881 154125.9084 152080.3504 139780.5863 146571.9554 143436.5553 152346.2773 0.859206231 0.892812563 0.957091783 0.91962725 1.011681487 0.998254457 0.917518884 0.962097387 0.941516641 1 17.21699472 -5.026377906 1.268549897 0.965616734 0.834138119 0.584307152 0.03039986 0.702482086 1.336506494 0.009583956 0.107775787 9.41E-06 5.026377906 -0.131478615 QPS(ph)PSHDGSLSPLQDR ddPTM_A459_MK2206_30min_R1 6 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 QPS(0.998)PS(0.002)HDGSLSPLQDR;QPS(0.996)PS(0.004)HDGSLSPLQDR;QPS(0.996)PS(0.004)HDGSLSPLQDR;QPS(0.696)PS(0.303)HDGS(0.001)LSPLQDR;QPS(0.93)PS(0.069)HDGS(0.001)LSPLQDR;QPS(0.886)PS(0.113)HDGS(0.001)LSPLQDR 237.34 2.74E-21 480544000 6050.08 5324.72 5787.72 4477.25 6683.51 5338.87 5354.86 4910.76 4377.97 3767.44 TRUE FALSE 5535.488926 4978.07976 5394.865692 4822.088571 6417.291644 5641.152206 4997.64706 4867.825743 4833.075648 4234.17891 1.307334679 1.175689518 1.274123226 1.138848564 1.515592936 1.332289524 1.180310791 1.149650463 1.141443418 1 12.04786651 -8.129869323 1.126172851 1.022737749 1.282630142 0.447735776 0.099748151 0.472669499 1.138847769 0.097552747 0.033246814 7.42E-09 8.129869323 0.259892394 QPS(ph)PSHDGSLSPLQDR ddPTM_A459_MK2206_30min_R2 3 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 QPS(0.658)PS(0.342)HDGSLSPLQDR;QPS(1)PSHDGSLSPLQDR;QPS(0.634)PS(0.366)HDGSLSPLQDR 128.94 0.00044173 289964000 108377 169118 149696 169980 184396 164474 145276 127017 155822 141789 TRUE FALSE 116674.4264 160719.846 154686.7899 156092.0903 177155.6865 170733.1733 126201.0867 143618.558 169375.1159 137162.4365 0.850629585 1.171748258 1.127763503 1.138009022 1.291575821 1.24475168 0.9200849 1.047069166 1.234850592 1 17.06552591 -10.62825629 14.58819558 0.999990821 1.118248538 0.060628342 0.133768418 0 0 0.131838633 0.031975565 2.35E-11 10.62825629 0.118257717 QPS(ph)PSPSPTER ddPTM_A459_MK2206_30min_R1 1 QPSPSPSPTER 11 0 P29590-2;P29590;P29590-9;P29590-8;P29590-5;P29590-3;P29590-4;P29590-12;P29590-13;P29590-11;H3BT57;P29590-10;P29590-14 P29590-2 PML Protein PML 1 QPS(0.933)PS(0.066)PS(0.001)PT(0.001)ER 139.74 0.0011433 15328000 890.73 660.61 773.71 490.01 667.57 597.5 819.68 694.31 719.19 834.76 TRUE FALSE 814.9687361 617.6041689 721.1927209 527.7506551 640.9792733 631.3299337 765.0006428 688.2397209 793.9523741 938.1763709 0.86867327 0.65830284 0.768717635 0.562528189 0.683218309 0.6729331 0.815412396 0.733593109 0.846271979 1 9.873715355 -8.588929935 0.864763454 0.999955247 0.701075112 0.55069955 0.080296303 0.520550401 0.852206439 0.076263113 0.026794972 2.58E-09 8.588929935 -0.298880135 QPS(ph)PSPSPTER ddPTM_A459_MK2206_30min_R2 1 QPSPSPSPTER 11 0 P29590-2;P29590;P29590-9;P29590-8;P29590-5;P29590-3;P29590-4;P29590-12;P29590-13;P29590-11;H3BT57;P29590-10;P29590-14 P29590-2 PML Protein PML 1 QPS(0.499)PS(0.499)PS(0.001)PT(0.001)ER 109.6 0.0076825 0 8487.8 8722 9970.4 13844 10958 10004 10992 7717.9 11137 10124 TRUE FALSE 9137.632494 8288.878163 10302.80816 12712.90092 10527.73386 10384.70923 9548.737196 8726.65603 12105.67613 9793.654709 0.933015587 0.846351889 1.051988095 1.298075263 1.074954567 1.060350762 0.974992225 0.891052042 1.236073406 1 13.25763162 -5.316846811 6.64032993 1.074286445 0.890044521 0.294912453 0.113800876 0.272475056 26.73406277 0.031167092 0.066326259 4.82E-06 5.316846811 -0.184241924 QPS(ph)SPGPTPR ddPTM_A459_MK2206_30min_R2 1 QPSSPGPTPR 10 0 Q13424-2;Q13424 Q13424-2 SNTA1 Alpha-1-syntrophin 1 QPS(0.664)S(0.335)PGPT(0.001)PR 89.663 0.030526 18200000 34922 39729 37033 40977 40259 46425 43155 35378 35642 42348 TRUE FALSE 37595.65517 37756.11563 38267.66174 37629.04802 38678.22937 48191.73591 37488.69666 40002.02607 38742.07673 40966.18823 0.917724026 0.921640925 0.934127958 0.918539158 0.944150067 1.176378325 0.915113128 0.976464441 0.945708605 1 15.32214604 -6.54206625 24.9914288 1.002949949 0.924659571 0.258059745 0.064779463 350.0106895 455880.5742 0.021583826 0.021586823 2.87E-07 6.54206625 -0.078290378 QPS(ph)SPSHNTNLR ddPTM_A459_MK2206_30min_R1 2 QPSSPSHNTNLR 12 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 QPS(0.845)S(0.12)PS(0.034)HNT(0.002)NLR;QPS(0.682)S(0.297)PS(0.02)HNT(0.002)NLR 118.73 0.00445 10780000 1525.92 1095.82 1401.49 761.05 1683.4 2148.21 1765.37 1550.22 816.25 823.53 TRUE FALSE 1396.132491 1024.481919 1306.360764 819.6662029 1616.346613 2269.839794 1647.605388 1536.66659 901.1021085 925.5551137 1.508427181 1.106883754 1.411434872 0.885594159 1.746353717 2.452409111 1.78012672 1.660264815 0.973580174 1 9.85417509 -6.288043184 24.33424861 1.686550271 1.232524125 0.138403218 0.427026804 890.9369547 814928.7766 0.135962391 0.154216911 5.15E-07 6.288043184 -0.454026145 QPS(ph)SPSHNTNLR ddPTM_A459_MK2206_30min_R2 1 QPSSPSHNTNLR 12 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 QPS(0.5)S(0.5)PSHNTNLR 106.55 0.0058572 18375000 7895.4 10472 9553 14566 16021 15753 17383 10246 12510 8148.1 TRUE FALSE 8499.877895 9951.975708 9871.492252 13375.91121 15391.93504 16352.49145 15100.59122 11585.18738 13598.09719 7882.228164 1.078359788 1.262584069 1.25237332 1.696970822 1.952739089 2.074602652 1.915776974 1.469785845 1.725159042 1 12.9443878 -5.753605056 4.051397171 1.751049643 1.190644608 0.370620337 0.288836488 0.201945067 7.444203727 0.080959172 0.136555908 1.76E-06 5.753605056 -0.560405034 QPS(ph)VETLDSPTGSHVEWCK ddPTM_A459_MK2206_30min_R2 1 QPSVETLDSPTGSHVEWCK 19 0 F8WA39;Q13613;E9PPP8;Q8NEC6;Q13613-2 F8WA39 MTMR1 Myotubularin-related protein 1 1 QPS(0.989)VETLDS(0.01)PTGSHVEWCK 123.36 0.00027353 5049800 27036 35999 28217 40567 35174 34612 39391 26837 36539 27534 TRUE FALSE 29105.89695 34211.34201 29157.7407 37252.54633 33792.89202 35929.18391 34218.91438 30344.68805 39717.09617 26635.56783 1.092745502 1.284423228 1.094691913 1.398601545 1.268713032 1.348917513 1.284707523 1.139254407 1.491130072 1 14.70106642 -3.64345144 0.941867958 1.274205644 2.80E-14 0.097030686 0.13947198 32.55430732 4.36649951 0.042483445 69.39317264 0.000227273 3.64345144 -1.274205644 QPSGS(ph)FSTPGSATYVR ddPTM_A459_MK2206_30min_R1 2 QPSGSFSTPGSATYVR 16 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 QPS(0.001)GS(0.974)FS(0.019)T(0.006)PGSATYVR;QPS(0.009)GS(0.989)FS(0.001)T(0.001)PGSATYVR 171.52 7.84E-06 26562000 337.71 423.39 296.9 404.29 618.73 669.06 1221.91 1508.92 1272.03 1135.09 TRUE FALSE 308.9859911 395.827234 276.7472552 435.4284859 594.0846739 706.941599 1140.398613 1495.727672 1404.262071 1275.713519 0.24220641 0.310279093 0.216935269 0.341321527 0.465688154 0.554153882 0.893930022 1.172463605 1.100766003 1 10.31708867 -7.1432685 1.267311165 1.122034696 0.279913546 0.964499204 0.066927935 0.075612306 0.241596269 0.04086762 0.026074418 7.19E-08 7.1432685 -0.84212115 down QPSGS(ph)FSTPGSATYVR ddPTM_A459_MK2206_30min_R2 4 QPSGSFSTPGSATYVR 16 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 QPS(0.095)GS(0.894)FS(0.006)T(0.006)PGSATYVR;QPS(0.002)GS(0.613)FS(0.131)T(0.247)PGS(0.006)ATYVR;QPS(0.009)GS(0.991)FSTPGSATYVR;QPS(0.136)GS(0.783)FS(0.024)T(0.056)PGSATYVR 219.96 8.88E-11 22922000 11302.3 13670.9 11652.8 13139.03 24521.2 36514.8 39409.3 30029.2 44526.4 44116.6 TRUE FALSE 12167.61278 12992.02299 12041.29854 12065.52922 23558.37448 37904.3963 34234.81157 33954.11955 48399.22579 42677.07895 0.285108847 0.304426247 0.282149079 0.282716847 0.552014689 0.888167542 0.802182633 0.795605519 1.134080096 1 15.38117381 -6.584021032 1.973402374 0.918428066 0.28234581 0.914257842 0.092006494 0.091774997 0.726839069 0.035221719 0.036567243 2.61E-07 6.584021032 -0.636082256 down QPSPS(ph)HDGSLSPLQDR ddPTM_A459_MK2206_30min_R1 3 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 QPS(0.232)PS(0.717)HDGS(0.035)LS(0.017)PLQDR;QPS(0.329)PS(0.671)HDGSLSPLQDR;QPS(0.235)PS(0.765)HDGSLSPLQDR 150.92 0.00021606 18314200 1703.16 1270.86 1488.87 1264.49 1974.15 1881.88 1667.06 1263.49 1011.76 1092.54 TRUE FALSE 1558.297298 1188.126783 1387.809653 1361.881239 1895.515425 1988.430419 1555.853469 1252.44344 1116.936073 1227.892103 1.269083248 0.967614972 1.13023746 1.109121262 1.543714973 1.619385298 1.267092984 1.019994702 0.909636986 1 10.26196808 -7.812559024 4.442156413 0.961195265 1.273354915 0.354637742 0.183972124 0.27407491 11.20552202 0.121195272 0.057234729 1.54E-08 7.812559024 0.312159651 QPSPS(ph)HDGSLSPLQDR ddPTM_A459_MK2206_30min_R2 1 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 QPS(0.447)PS(0.55)HDGS(0.003)LSPLQDR 158.45 6.88E-05 139750000 10695 18184 16039 16336 20410 15390 15662 15302 15980 15032 TRUE FALSE 11513.81742 17281.009 16573.73225 15001.29654 19608.60085 15975.67723 13605.56059 17302.02394 17369.91151 14541.50707 0.791789831 1.188391885 1.139753409 1.031619107 1.348457265 1.098625965 0.935636212 1.189837054 1.194505592 1 13.82788918 -4.755240622 24.9965341 1.128887771 0.791789275 0.445796213 0.111456404 194.4813127 784171.9506 0.027680035 0.249967744 1.76E-05 4.755240622 -0.337098496 QPSPS(ph)PSPTER ddPTM_A459_MK2206_30min_R1 2 QPSPSPSPTER 11 0 P29590-2;P29590;P29590-9;P29590-8;P29590-5;P29590-3;P29590-4;P29590-12;P29590-13;P29590-11;H3BT57;P29590-10;P29590-14 P29590-2 PML Protein PML 1 QPS(0.11)PS(0.889)PS(0.001)PT(0.001)ER;QPS(0.028)PS(0.735)PS(0.118)PT(0.118)ER 106.29 0.01004 2260400 1515.57 1584.3 1157.64 1403.31 1361.73 1344.31 1794.51 1425.88 1154.08 1535.07 TRUE FALSE 1386.662813 1481.161782 1079.062622 1511.393179 1307.489411 1420.42367 1674.801512 1413.413681 1274.050746 1725.246061 0.80374785 0.858522048 0.625454332 0.876044997 0.757856772 0.823316571 0.970760954 0.819253389 0.738474804 1 10.75258642 -7.004219259 24.06458221 0.871342739 0.785303618 0.192888705 0.093297433 209.9049734 1197204.676 0.032920254 0.028326745 9.90E-08 7.004219259 -0.08603912 QPSPS(ph)PSPTER ddPTM_A459_MK2206_30min_R2 1 QPSPSPSPTER 11 0 P29590-2;P29590;P29590-9;P29590-8;P29590-5;P29590-3;P29590-4;P29590-12;P29590-13;P29590-11;H3BT57;P29590-10;P29590-14 P29590-2 PML Protein PML 1 QPS(0.037)PS(0.959)PS(0.003)PTER 125.84 0.0034288 0 6160.3 8867.2 9712.7 8984.3 5404.8 7379.4 8577.3 3043.3 7611.3 6316.8 TRUE FALSE 6631.937304 8426.867742 10036.51657 8250.253951 5192.580395 7660.228238 7451.090207 3441.069759 8273.317116 6110.683333 1.085302076 1.379038527 1.642454047 1.350136065 0.849754457 1.253579644 1.219354661 0.563123561 1.353910302 1 12.577118 -6.153863371 7.016015736 1.038412571 1.389336591 0.295316609 0.244673505 0.318091805 18.24851032 0.071833225 0.093098763 7.02E-07 6.153863371 0.35092402 QPSPSHDGSLS(ph)PLQDR ddPTM_A459_MK2206_30min_R1 1 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 QPSPSHDGS(0.082)LS(0.918)PLQDR 141.79 0.00034105 0 2089.6 1185.3 1716.5 1117.7 3099.4 3182.1 2912.3 1981.7 1026.4 1302 TRUE FALSE 1911.868547 1108.136755 1599.988762 1203.785448 2975.944335 3362.267752 2718.025781 1964.374206 1133.097953 1463.30159 1.306544434 0.75728528 1.093410117 0.82265027 2.033719061 2.297727123 1.8574611 1.342426073 0.774343417 1 10.51501143 -6.246887866 24.87686189 1.620732243 0.985026099 0.257158615 0.453586901 1019.595517 1743071.506 0.143872405 0.184887328 5.66E-07 6.246887866 -0.635706144 QPSS(ph)PGPTPR ddPTM_A459_MK2206_30min_R2 1 QPSSPGPTPR 10 0 Q13424-2;Q13424 Q13424-2 SNTA1 Alpha-1-syntrophin 1 QPS(0.419)S(0.581)PGPTPR 106.79 0.011689 17641000 30465 30012 31935 39756 33547 37528 41923 32253 33659 35076 TRUE FALSE 32797.42382 28521.64772 32999.69696 36507.80763 32229.77622 38956.15434 36418.45974 36468.57784 36586.59898 33931.47299 0.966578251 0.840566153 0.972539476 1.07592758 0.949849016 1.148083207 1.073294394 1.074771433 1.078249653 1 15.05033644 -5.570995258 3.902509794 1.059929992 0.902760573 0.541739511 0.057181155 0.14853422 4.730526871 0.015410015 0.029318048 2.69E-06 5.570995258 -0.157169419 QPSS(ph)PSHNTNLR ddPTM_A459_MK2206_30min_R2 2 QPSSPSHNTNLR 12 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 QPS(0.382)S(0.615)PS(0.003)HNTNLR;QPS(0.001)S(0.718)PS(0.28)HNT(0.001)NLR 142.39 0.00091249 14315100 11192.7 21334.6 14277.7 25851 24001.3 26541 22768.9 16171 22171 17160.9 TRUE FALSE 12049.62172 20275.15479 14753.71139 23738.89061 23058.88837 27551.03635 19779.31608 18284.60522 24099.3935 16600.94124 0.72583967 1.221325616 0.888727403 1.42997257 1.389010902 1.659606884 1.191457508 1.101419791 1.451688381 1 14.01897742 -5.760282768 24.99999889 1.333790147 0.972900324 0.390503204 0.211628606 32.28587617 697817.8098 0.05807122 0.093789 1.74E-06 5.760282768 -0.360889823 QPSS(ph)PYEDK ddPTM_A459_MK2206_30min_R1 2 QPSSPYEDK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.032)S(0.968)PYEDK;QPS(0.038)S(0.96)PY(0.002)EDK 122.18 0.006027 19779700 9822.5 10965.6 9598.1 6478.7 6352.6 7456.3 11313.2 7672.5 10550.9 15392.3 TRUE FALSE 8987.044795 10251.73745 8946.607714 6977.690597 6099.56249 7878.469262 10558.51707 7605.420141 11647.70381 17299.21433 0.519505951 0.592612893 0.517168441 0.403353035 0.352591879 0.45542353 0.610346624 0.439639627 0.673308255 1 14.0784189 -8.611657605 2.648955134 0.999857148 0.486643001 0.811495681 0.075993635 0.170891392 2.756435833 0.080260867 0.021599163 2.45E-09 8.611657605 -0.513214148 QPSS(ph)PYEDKDK ddPTM_A459_MK2206_30min_R1 2 QPSSPYEDKDK 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.062)S(0.938)PYEDKDK;QPS(0.013)S(0.987)PYEDKDK 192.4 9.56E-05 54640000 7292.6 8760.94 10016.27 6002.3 4085.02 4841.4 7913.77 5720.04 9327.09 13865.7 TRUE FALSE 6672.326075 8190.601214 9336.393499 6464.598186 3922.305003 5115.515884 7385.856843 5670.030293 10296.67438 15583.4876 0.428166419 0.525594875 0.599120925 0.414836419 0.251696225 0.328265149 0.473954036 0.36384861 0.660742617 1 13.92773053 -8.569545213 3.049859122 0.999357791 0.425678796 0.78605309 0.09353008 0.136293971 3.278810222 0.101338812 0.026973752 2.69E-09 8.569545213 -0.573678995 down QPSS(ph)PYEDKDK ddPTM_A459_MK2206_30min_R2 4 QPSSPYEDKDK 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.07)S(0.93)PYEDKDK;QPS(0.035)S(0.965)PYEDKDK;QPS(0.226)S(0.774)PYEDKDK;QPS(0.098)S(0.902)PYEDKDK 215.87 9.65E-05 353738000 1095010 605090 860610 588190 567470 330705 839450 679950 378156 892890 TRUE FALSE 1178844.808 575042.1105 889302.3079 540132.9955 545188.2765 343290.2105 729229.2066 768821.7996 411047.3253 863755.0724 1.364790605 0.665746725 1.029576944 0.625331199 0.631183878 0.397439299 0.844254616 0.89009237 0.475884123 1 19.72026275 -4.75840193 24.97408386 0.721762654 1.364791493 0.475016186 0.20044653 73.64599838 605414.1237 0.049445511 0.339750339 1.74E-05 4.75840193 0.643028839 QPSSPSHNT(ph)NLR ddPTM_A459_MK2206_30min_R1 1 QPSSPSHNTNLR 12 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 QPS(0.075)S(0.174)PS(0.018)HNT(0.734)NLR 156.52 0.0010198 11392000 3182.4 1932.6 1827.8 1308.7 3619.8 3408.6 2959.9 2396.6 1349.4 1214.7 TRUE FALSE 2911.720169 1806.787389 1703.734029 1409.496301 3475.615701 3601.591986 2762.450472 2375.646779 1489.674959 1365.186207 2.132837378 1.323473223 1.247986553 1.03245718 2.545891311 2.638169042 2.023497204 1.740163186 1.091188112 1 10.41488203 -8.258932122 3.851039584 1.008204859 1.834686775 0.285737788 0.502601078 0.329799339 10.73782083 0.497146322 0.146918812 5.51E-09 8.258932122 0.826481916 QPSSS(ph)PSSIIR ddPTM_A459_MK2206_30min_R1 2 QPSSSPSSIIR 11 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 QPS(0.058)S(0.191)S(0.635)PS(0.058)S(0.058)IIR;QPS(0.016)S(0.112)S(0.85)PS(0.018)S(0.005)IIR 104.94 0.011983 22284800 1118.18 1002.26 1196.97 691.25 1100.08 1180.8 1443.69 1559.82 1051.67 1307.64 TRUE FALSE 1023.072919 937.0126918 1115.723011 744.4901948 1056.261484 1247.655876 1347.384074 1546.182658 1160.99486 1469.640315 0.696138306 0.637579605 0.759181005 0.506579867 0.718721086 0.848953218 0.916812134 1.052082365 0.789985718 1 10.52124739 -6.844729188 2.353530394 0.941479713 0.653029218 0.69996313 0.086724817 0.161151193 1.824326544 0.033246118 0.029141526 1.43E-07 6.844729188 -0.288450495 QPSVETLDS(ph)PTGSHVEWCK ddPTM_A459_MK2206_30min_R2 1 QPSVETLDSPTGSHVEWCK 19 0 F8WA39;Q13613;E9PPP8;Q8NEC6;Q13613-2 F8WA39 MTMR1 Myotubularin-related protein 1 1 QPS(0.048)VET(0.04)LDS(0.894)PT(0.008)GS(0.01)HVEWCK 67.645 0.013528 6257000 12483 15470 14997 16393 13985 13789 16550 11857 14853 12139 TRUE FALSE 13438.70808 14701.7823 15496.99249 15053.63946 13435.87863 14313.75006 14376.96512 13406.75061 16144.88709 11742.90542 1.144410824 1.251971447 1.319689799 1.281934829 1.144169875 1.218927475 1.224310731 1.141689397 1.374863078 1 13.51950178 -6.246930073 24.75265567 1.194840461 1.254691567 0.091352814 0.097133096 1920.808125 3276865.211 0.027540651 0.035365779 5.66E-07 6.246930073 0.059851106 QPT(ph)PPFFGR ddPTM_A459_MK2206_30min_R1 2 QPTPPFFGR 9 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 QPT(1)PPFFGR;QPT(1)PPFFGR 112.94 0.021993 1774840000 7275.8 6913 7491 6018.6 7773 7114.9 7709 7702.8 6543.8 6280.7 TRUE FALSE 6656.955003 6462.962444 6982.531791 6482.153615 7463.38495 7517.739489 7194.746676 7635.455232 7224.051427 7058.800533 0.943071698 0.915589329 0.989195226 0.918308087 1.057316313 1.065016564 1.0192591 1.081693015 1.02341062 1 12.78520734 -6.265806576 24.97835793 1.045302779 0.943091254 0.734430681 0.029262996 175.9095243 1006120.852 0.008471494 0.009955187 5.42E-07 6.265806576 -0.102211525 QPT(ph)PPSEAAASK ddPTM_A459_MK2206_30min_R2 2 QPTPPSEAAASK 12 0 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 QPT(0.985)PPS(0.015)EAAASK;QPT(0.897)PPS(0.094)EAAAS(0.008)K 113.43 0.013935 22872000 115065 49604 62024 63179 48218 61912 115936 57048 64780 61547 TRUE FALSE 123874.4649 47140.73749 64091.8492 58017.0736 46324.71904 64268.10454 100713.4639 64504.36948 70414.4473 59538.72643 2.080569611 0.79176597 1.076473298 0.974442637 0.778060295 1.079433646 1.691562282 1.083401902 1.182666334 1 15.86154074 -4.750990685 24.99921563 1.08302479 2.080571685 0.612728047 0.240170953 327.2966039 783027.5266 0.063828252 0.885531884 1.77E-05 4.750990685 0.997546895 QPTAEGSGSDAHSVESLTAQNLSLHSGTAT(ph)PPLTSR ddPTM_A459_MK2206_30min_R2 1 QPTAEGSGSDAHSVESLTAQNLSLHSGTATPPLTSR 36 0 Q9UDT6-2;Q9UDT6 Q9UDT6-2 CLIP2 CAP-Gly domain-containing linker protein 2 1 QPTAEGSGSDAHSVES(0.003)LT(0.006)AQNLS(0.013)LHS(0.155)GT(0.345)AT(0.439)PPLT(0.027)S(0.013)R 51.259 0.0048869 14590000 2731.2 7717.4 7317.5 15948 14615 22770 13111 8768.4 16754 10131 TRUE FALSE 2940.302772 7334.165138 7561.461798 14644.99738 14041.14167 23636.52831 11389.50995 9914.459986 18211.23264 9800.4263 0.300017844 0.748351644 0.771544172 1.494322485 1.432707235 2.411785731 1.16214434 1.011635584 1.858208212 1 13.25862879 -5.629234581 2.148688877 1.51674149 0.510452714 0.492018005 0.410252309 0.271897173 2.524929103 0.12361644 0.271587478 2.35E-06 5.629234581 -1.006288776 QPVSEPPADQVASDMPHS(ph)PTLR ddPTM_A459_MK2206_30min_R1 2 QPVSEPPADQVASDMPHSPTLR 22 0 H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;H7C231;H7C2V9 H7BYY2 BCOR BCL-6 corepressor 1 QPVSEPPADQVASDMPHS(0.743)PT(0.257)LR;QPVSEPPADQVAS(0.001)DMPHS(0.752)PT(0.247)LR 166.93 7.22E-12 21887000 4938.5 3683.5 4470.4 3400.4 4840.8 5576.7 5790.9 4480.7 3567.2 3633.9 TRUE FALSE 4518.454642 3443.70348 4166.961703 3662.299397 4647.980685 5892.447935 5404.599627 4441.525712 3938.023205 4084.094967 1.106353961 0.843198679 1.02029011 0.896722389 1.138068709 1.442779363 1.323328588 1.087517736 0.964233995 1 11.9958007 -6.380739213 5.498301027 1.189860064 0.962780215 0.27752956 0.149152618 0.284386262 11.70359983 0.049327512 0.055984014 4.16E-07 6.380739213 -0.227079849 QPVSEPPADQVASDMPHS(ph)PTLR ddPTM_A459_MK2206_30min_R2 1 QPVSEPPADQVASDMPHSPTLR 22 0 H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;H7C231;H7C2V9 H7BYY2 BCOR BCL-6 corepressor 1 QPVSEPPADQVAS(0.007)DMPHS(0.706)PT(0.287)LR 61.751 0.0081912 11868000 20839 20588 23806 23936 21022 22022 22684 17033 17565 21456 TRUE FALSE 22434.44986 19565.62986 24599.68016 21980.35223 20196.57065 22860.06264 19705.56355 19259.27158 19092.77195 20755.89248 1.080871366 0.942654231 1.18519019 1.058993356 0.973052384 1.101377003 0.949396109 0.927894168 0.919872367 1 14.34123335 -7.306412308 10.37843997 0.943163211 1.053906918 0.390231923 0.065727245 0.778332936 177.0103796 0.027213331 0.018368333 4.94E-08 7.306412308 0.110743707 QPVY(ph)DT(ph)T(ph)IRT(ph)GRALKEK ddPTM_A459_MK2206_30min_R2 1 QPVYDTTIRTGRALKEK 17 3 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 4 QPVY(1)DT(1)T(1)IRT(1)GRALKEK 45.047 0.047853 0 3583 2964.6 2183 2905.3 2485.3 4020.9 3553.7 4770.5 3323 5022.3 TRUE FALSE 3857.317235 2817.382275 2255.78013 2667.927696 2387.714634 4173.918167 3087.094921 5394.02073 3612.028533 4858.422762 0.793944336 0.579896483 0.464302973 0.549134529 0.491458803 0.859109709 0.635410929 1.11024112 0.743457025 1 12.24627232 -7.25450268 1.323274583 0.933203613 0.574146396 0.481992275 0.149172338 0.368606301 1.259936322 0.090006467 0.052504545 5.57E-08 7.25450268 -0.359057217 QPVYYDELDAASSS(ph)LRR ddPTM_A459_MK2206_30min_R2 1 QPVYYDELDAASSSLRR 17 1 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 QPVYYDELDAAS(0.053)S(0.226)S(0.721)LRR 82.56 0.0073113 4720100 12648 17449 13110 10205 11616 11854 10423 7241.3 7584.7 11847 TRUE FALSE 13616.3406 16582.50803 13547.08086 9371.218856 11159.89747 12305.11228 9054.44758 8187.762773 8244.403496 11460.43336 1.188117428 1.446935514 1.182074048 0.817701963 0.97377622 1.073703925 0.790061536 0.714437449 0.719379733 1 13.48437398 -5.634369673 4.035547674 0.867639521 1.318096712 0.685030888 0.126881998 0.12688521 3.763146835 0.037738709 0.068523729 2.32E-06 5.634369673 0.450457191 QPYPSRPPFDNQHS(ph)QDLDSR ddPTM_A459_MK2206_30min_R2 2 QPYPSRPPFDNQHSQDLDSR 20 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 QPYPSRPPFDNQHS(0.999)QDLDS(0.001)R;QPYPSRPPFDNQHS(0.999)QDLDS(0.001)R 126.93 0.00011423 28413000 34017 32152 37819 31382 31762 28521 41865 39355 32153 42593 TRUE FALSE 36621.36767 30555.37843 39079.86658 28817.99021 30514.86429 29606.38664 36368.07521 44498.83363 34949.60982 41203.1939 0.888799246 0.74157791 0.948466924 0.699411562 0.740594634 0.718545915 0.882651847 1.079985055 0.848225745 1 15.33046855 -7.522640327 24.88632142 0.974726963 0.789309884 0.466024523 0.089827842 7.19975019 751814.5026 0.040643333 0.023797716 3.00E-08 7.522640327 -0.18541708 QQAAYYAQT(ph)SPQGMPQHPPAPQGQ ddPTM_A459_MK2206_30min_R1 3 QQAAYYAQTSPQGMPQHPPAPQGQ 24 0 Q96AE4 Q96AE4 FUBP1 Far upstream element-binding protein 1 1 QQAAYY(0.002)AQT(0.558)S(0.439)PQGMPQHPPAPQGQ;QQAAYY(0.004)AQT(0.535)S(0.46)PQGMPQHPPAPQGQ;QQAAY(0.002)Y(0.002)AQT(0.543)S(0.454)PQGMPQHPPAPQGQ 92.309 4.67E-05 32690100 6630.4 6447 6806.9 5397.3 6848.3 6389.7 7272.8 6861.8 5643.6 5719.4 TRUE FALSE 6066.449662 6027.299128 6344.866593 5813.000981 6575.517709 6751.479292 6787.644782 6801.808006 6230.272416 6427.962451 0.94375935 0.93766869 0.987072753 0.904330264 1.022955215 1.05032961 1.055955885 1.058159262 0.969245303 1 12.65014579 -6.363386162 6.607648531 1.032484495 0.946171096 0.616525679 0.031811819 0.158066365 8.783849029 0.009746882 0.011059215 4.33E-07 6.363386162 -0.0863134 QQAAYYAQT(ph)SPQGMPQHPPAPQGQ ddPTM_A459_MK2206_30min_R2 3 QQAAYYAQTSPQGMPQHPPAPQGQ 24 0 Q96AE4 Q96AE4 FUBP1 Far upstream element-binding protein 1 1 QQAAY(0.001)Y(0.004)AQT(0.558)S(0.437)PQGMPQHPPAPQGQ;QQAAY(0.001)Y(0.003)AQT(0.973)S(0.023)PQGMPQHPPAPQGQ;QQAAYY(0.001)AQT(0.499)S(0.499)PQGMPQHPPAPQGQ 95.988 1.46E-05 43630000 86293 94704 97661 121584 102506 107013 108563 85426 86028 98146 TRUE FALSE 92899.65843 90001.13707 100916.969 111650.1983 98481.09939 111085.4547 94308.54769 96591.47151 93510.55994 94943.50406 0.978473034 0.947944127 1.062915994 1.175964584 1.037260004 1.170016378 0.993312272 1.017357348 0.984907402 1 16.53478168 -10.48671361 10.75084592 0.999999988 1.044388945 0.02520784 0.073493246 0 0 0.075555728 0.018324956 3.26E-11 10.48671361 0.044388957 QQAAYYAQTS(ph)PQGMPQHPPAPQGQ ddPTM_A459_MK2206_30min_R2 5 QQAAYYAQTSPQGMPQHPPAPQGQ 24 0 Q96AE4 Q96AE4 FUBP1 Far upstream element-binding protein 1 1 QQAAY(0.001)Y(0.003)AQT(0.483)S(0.513)PQGMPQHPPAPQGQ;QQAAY(0.001)Y(0.005)AQT(0.463)S(0.531)PQGMPQHPPAPQGQ;QQAAY(0.001)Y(0.011)AQT(0.3)S(0.689)PQGMPQHPPAPQGQ;QQAAYYAQT(0.084)S(0.916)PQGMPQHPPAPQGQ;QQAAY(0.001)Y(0.001)AQT(0.37)S(0.628)PQGMPQHPPAPQGQ 91.617 7.80E-05 51822300 147475 167548 157701.4 185600 150133 178175 181460 137915.4 151546 169995 TRUE FALSE 158765.7994 159227.81 162959.086 170435.8863 144238.0241 184955.5745 157634.084 155941.4163 164727.1971 164448.0771 0.965446372 0.968255834 0.990945524 1.036411549 0.877103744 1.124705 0.958564471 0.948271449 1.001697314 1 17.32727261 QQADKESEVS(ph)PSR ddPTM_A459_MK2206_30min_R1 1 QQADKESEVSPSR 13 1 Q86SQ7-2;Q86SQ7-3;Q86SQ7-4;Q86SQ7 Q86SQ7-2 SDCCAG8 Serologically defined colon cancer antigen 8 1 QQADKESEVS(0.998)PS(0.002)R 226.93 3.20E-12 1722600 509.98 450.77 324.96 465.93 432.51 424.48 490.99 562.38 511.82 383.07 TRUE FALSE 466.603523 421.4247911 302.9026206 501.8160093 415.2822108 448.5136908 458.236953 557.463171 565.0255206 430.5276036 1.083794672 0.978856611 0.70356144 1.165583821 0.964589047 1.04177685 1.064361377 1.294837233 1.31240254 1 8.74996193 -7.533959074 2.92704135 1.226293834 0.983609581 0.311807245 0.138130202 0.286517849 5.001602688 0.071627446 0.039806853 2.92E-08 7.533959074 -0.242684254 QQAGAQGPGS(ph)ADLEDGEMGKR ddPTM_A459_MK2206_30min_R2 2 QQAGAQGPGSADLEDGEMGKR 21 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 QQAGAQGPGS(1)ADLEDGEMGKR;QQAGAQGPGS(1)ADLEDGEMGKR 80.191 0.0010446 11461800 28041 28803 26687 27738 28333 26076 29294 21826 26100 27763 TRUE FALSE 30187.84052 27372.6849 27576.73126 25471.71667 27220.50406 27068.34045 25447.66261 24678.73314 28370.13082 26857.09558 1.124017317 1.019197508 1.026794993 0.948416652 1.01353119 1.007865514 0.94752102 0.918890617 1.056336518 1 14.71301567 -1.522881053 0.876744737 0.981816184 61.35576234 0.519078235 0.038914146 602.6649366 1.481030664 0.013042954 72702.18406 0.029999841 1.522881053 60.37394616 QQASKS(ph)PYNGVR ddPTM_A459_MK2206_30min_R1 4 QQASKSPYNGVR 12 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 1 QQAS(0.001)KS(0.999)PYNGVR;QQAS(0.001)KS(0.999)PYNGVR;QQAS(0.003)KS(0.997)PYNGVR;QQAS(0.338)KS(0.655)PY(0.007)NGVR 201.08 0.00040272 62930000 11295.6 11166.1 12236.1 11254.6 12629 10794.1 12749 13127.4 8772 8650.5 TRUE FALSE 10334.8499 10439.18486 11405.54762 12121.43124 12125.96019 11405.25261 11898.53747 13012.62853 9683.880791 9722.189248 1.063016738 1.07374837 1.17314602 1.246780014 1.24724585 1.173115676 1.223853719 1.338446331 0.996059688 1 13.2470655 -5.290078251 3.895186748 1.195024429 1.065126371 0.127322916 0.102466436 0.329668504 11.17620114 0.025702468 0.064116729 5.13E-06 5.290078251 -0.129898057 QQDLHLES(ph)PQRQPEYS(ph)PESPR ddPTM_A459_MK2206_30min_R1 3 QQDLHLESPQRQPEYSPESPR 21 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 QQDLHLES(0.881)PQRQPEY(0.4)S(0.717)PES(0.003)PR;QQDLHLES(0.988)PQRQPEY(0.116)S(0.782)PES(0.113)PR;QQDLHLES(0.995)PQRQPEY(0.016)S(0.583)PES(0.406)PR 75.191 0.0060678 73764000 7350.1 6621.4 7223.1 6076.4 8014 7158.3 7813.3 7055.4 6321.7 5693 TRUE FALSE 6724.935398 6190.345657 6732.816097 6544.405381 7694.78541 7563.59676 7292.089013 6993.715382 6978.863337 6398.29182 1.051051685 0.967499738 1.052283373 1.022836339 1.202631206 1.182127507 1.139693096 1.093059769 1.090738518 1 12.64347108 -6.224504361 21.83523339 1.126981505 1.021485271 0.394279672 0.056791764 122.0572799 72156.97702 0.016811793 0.021702134 5.96E-07 6.224504361 -0.105496234 QQDLHLES(ph)PQRQPEYS(ph)PESPR ddPTM_A459_MK2206_30min_R2 1 QQDLHLESPQRQPEYSPESPR 21 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 QQDLHLES(1)PQRQPEY(0.145)S(0.847)PES(0.008)PR 81.639 0.0072255 0 10538 10020 8370.8 9886.8 11394 14688 12331 9944 12280 12262 TRUE FALSE 11344.79738 9522.42137 8649.878294 9079.016814 10946.61431 15246.96213 10711.92489 11243.71494 13348.0922 11861.89194 0.956407075 0.802774247 0.729215738 0.765393654 0.922838815 1.285373548 0.903053656 0.947885463 1.125292008 1 13.53404651 -6.52473313 24.9975844 1.046886981 0.811349641 0.502849906 0.11210889 51.89601193 699555.1643 0.037443278 0.037690879 2.99E-07 6.52473313 -0.235537339 QQDLHLES(ph)PQRQPEYSPESPR ddPTM_A459_MK2206_30min_R2 3 QQDLHLESPQRQPEYSPESPR 21 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QQDLHLES(0.999)PQRQPEYS(0.001)PESPR;QQDLHLES(0.994)PQRQPEY(0.003)S(0.002)PES(0.001)PR;QQDLHLES(0.983)PQRQPEY(0.008)S(0.009)PES(0.001)PR 65.064 0.0044399 115824000 270406 335248 319207 330766 371720 363806 391616 294154 315094 316917 TRUE FALSE 291108.4913 318600.0718 329849.2021 303741.3597 357124.4051 377650.8923 340196.3488 332600.9378 342500.3066 306576.0242 0.94954748 1.039220443 1.075913235 0.990753796 1.164880411 1.231834398 1.109663907 1.084888939 1.117179034 1 18.22588535 -5.047791058 0.850538868 1.118358017 0.91534363 0.332578654 0.06610627 1.999337028 1.46734857 0.026322163 0.352653888 8.96E-06 5.047791058 -0.203014388 QQDPS(ph)PGSNLGGGDDLK ddPTM_A459_MK2206_30min_R2 1 QQDPSPGSNLGGGDDLK 17 0 J3KTD8;Q13951-2 J3KTD8 CBFB 1 QQDPS(0.908)PGS(0.092)NLGGGDDLK 75.445 0.02209 6434600 42827 49576 46485 45528 43127 45666 53562 38134 40436 47415 TRUE FALSE 46105.86805 47114.12793 48034.7867 41808.21676 41433.61728 47403.85163 46529.24506 43118.24473 43953.05019 45867.85243 1.00518916 1.027171002 1.047242985 0.91149279 0.903325861 1.033487489 1.014419525 0.940053707 0.958253937 1 15.48519574 -5.740025541 24.99875614 0.965599422 1.026598055 0.318071072 0.040709396 315.8030362 368669.1632 0.011956207 0.020685208 1.82E-06 5.740025541 0.060998633 QQEGES(ph)RLNLVQR ddPTM_A459_MK2206_30min_R2 1 QQEGESRLNLVQR 13 1 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2 A0A5F9ZHM4;P00338 LDHB;LDHA L-lactate dehydrogenase B chain;L-lactate dehydrogenase;L-lactate dehydrogenase A chain 1 QQEGES(1)RLNLVQR 118.52 0.016169 3705200 12180 20428 17219 23983 19594 23826 22734 16658 21040 12750 TRUE FALSE 13112.51016 19413.57523 17793.07287 22023.51218 18824.64111 24732.71513 19748.99849 18835.2578 22870.02117 12333.96854 1.063121745 1.573992601 1.442607284 1.785598212 1.526243645 2.005252003 1.601187681 1.527104413 1.854230541 1 13.59034945 -4.326991881 1.442107283 1.636586751 9.56E-10 0.258632404 0.259629175 4.773221199 3.744932347 0.068227133 15.5448487 4.71E-05 4.326991881 -1.63658675 QQELCDILVAYS(ph)AYNPVSIPGQR ddPTM_A459_MK2206_30min_R1 1 QQELCDILVAYSAYNPVSIPGQR 23 0 Q2M2D7;Q86UD7-2 Q2M2D7 TBC1D28;TBC1D26 TBC1 domain family member 28;TBC1 domain family member 26 1 QQELCDILVAY(0.122)S(0.805)AY(0.04)NPVS(0.033)IPGQR 48.51 0.037721 26191000 878.93 1045.5 1084.4 1046.8 785.56 912.86 826.37 984.73 690.38 801.69 TRUE FALSE 804.1723881 977.43776 1010.793949 1127.424717 754.2694817 964.5453443 771.2443651 976.1206094 762.1474715 901.0094097 0.892523851 1.084825252 1.121846163 1.251290725 0.837138296 1.070516394 0.855978147 1.083363391 0.845881811 1 9.815398363 -6.273194978 24.98908732 0.954424612 1.089866394 0.25646514 0.115524452 1069.74396 2273969.815 0.034818805 0.039786384 5.33E-07 6.273194978 0.135441782 QQELTHQEHR ddPTM_A459_MK2206_30min_R1 2 QQELTHQEHR 10 0 P18206;P18206-2;P18206-3 P18206 VCL Vinculin 0 ; 182.92 0.00021977 2225700 1375.58 1135.79 1121.24 1394.08 1100.38 1258.51 1508.63 1871.05 174.16 835.7 FALSE TRUE 1258.579698 1061.849865 1045.133353 1501.452283 1056.549535 1329.765749 1407.992045 1854.691607 192.2645552 939.2328252 1.340008211 1.130550207 1.112752158 1.598594345 1.124906952 1.415799909 1.499087348 1.974687806 0.204703829 1 9.87533902 -8.270297885 24.9999587 0.602351946 1.382361729 0.520978012 0.305413378 569.7033791 1607764.11 0.274196485 0.075080511 5.37E-09 8.270297885 0.780009783 QQELTHQEHR ddPTM_A459_MK2206_30min_R2 3 QQELTHQEHR 10 0 P18206;P18206-2;P18206-3 P18206 VCL Vinculin 0 ;; 92.239 0.015175 22626200 56277 66847 59615 66173 63158 66557 60212 51363 56997 54174 FALSE TRUE 60585.61039 63527.47518 61602.53435 60766.45422 60678.09958 69089.87327 52306.09207 58076.32046 61954.49603 52406.30682 1.156074795 1.212210496 1.175479405 1.159525597 1.157839643 1.318350356 0.998087735 1.108193345 1.182195423 1 15.67745282 -9.509907574 0.291628453 0.952158782 1.197964457 0.326524974 0.073999849 6.930559415 0.90038312 0.484940109 0.100020916 3.09E-10 9.509907574 0.245805675 QQFILT(ph)SPDGAGTGK ddPTM_A459_MK2206_30min_R2 2 QQFILTSPDGAGTGK 15 0 P49116;P49116-2;C9JKS0;C9JMI6 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 QQFILT(0.5)S(0.5)PDGAGTGK;QQFILT(0.5)S(0.5)PDGAGTGK 233.84 6.49E-14 10833700 114876 120669 106105 123093 113540 112400 128787 94703 98627 120924 TRUE FALSE 123670.9949 114676.7529 109642.4877 113035.9081 109081.8491 116677.4608 111877.1122 107081.0073 107205.3982 116978.2598 1.057213495 0.980325345 0.937289441 0.966298425 0.932496767 0.99742859 0.956392345 0.915392377 0.916455745 1 16.83588091 -4.79626864 2.744403287 0.95125588 1.075500981 0.557406542 0.028007882 0.317658387 3.331148692 0.00730478 0.08964789 1.60E-05 4.79626864 0.124245101 QQFS(ph)PSMTER ddPTM_A459_MK2206_30min_R2 1 QQFSPSMTER 10 0 Q8TDB6 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 QQFS(0.991)PS(0.009)MTER 164.13 0.00038059 13465000 47029 59320 51635 50055 47316 52104 50664 39990 52168 45373 TRUE FALSE 50629.5764 56374.25506 53356.48513 45965.34638 45458.1361 54086.85423 44011.75594 45216.83031 56705.47834 43892.48273 1.153490832 1.284371527 1.215617842 1.047225938 1.035670194 1.232257801 1.002717395 1.030172537 1.291917769 1 15.42168626 -5.721523422 9.867374242 1.092558247 1.224816401 0.262588195 0.096849225 0.527259493 124.87961 0.025638095 0.044231963 1.90E-06 5.721523422 0.132258154 QQFSPS(ph)MTER ddPTM_A459_MK2206_30min_R2 1 QQFSPSMTER 10 0 Q8TDB6 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 QQFS(0.079)PS(0.92)MT(0.001)ER 154.23 0.00056513 12055000 37333 45114 38902 43860 41047 45296 35498 29451 38528 33704 TRUE FALSE 40191.24318 42873.70436 40198.97326 40276.4977 39435.28854 47019.77102 30837.06996 33300.34682 41879.0958 32604.24124 1.232699847 1.314973228 1.232936935 1.235314676 1.20951407 1.442136643 0.945799343 1.021350154 1.284467732 1 14.99277203 -7.270110723 24.95360676 1.064683493 1.272521143 0.507324642 0.10372019 550.5108204 1584203.519 0.042413399 0.029107974 5.37E-08 7.270110723 0.207837651 QQFYHS(ph)VQDLSGGSR ddPTM_A459_MK2206_30min_R1 1 QQFYHSVQDLSGGSR 15 0 P10398;P10398-2 P10398 ARAF Serine/threonine-protein kinase A-Raf 1 QQFYHS(0.985)VQDLS(0.015)GGSR 151.8 0.00023939 4111300 605.05 576.16 692.5 630.08 723.39 664.02 765.46 612.37 623.54 503.11 TRUE FALSE 553.5873203 538.6518793 645.4950294 678.6088708 694.5758445 701.6162386 714.3975601 607.0161137 688.3592144 565.4390651 0.979039749 0.952625866 1.141581948 1.200145007 1.228383193 1.240834392 1.263438634 1.073530556 1.217388852 1 9.143227749 -5.34097381 3.722232157 1.185680974 0.963461234 0.527095506 0.077436344 0.158099452 4.1456252 0.020070846 0.047566455 4.56E-06 5.34097381 -0.22221974 QQGFNYCTSAISS(ph)PLTK ddPTM_A459_MK2206_30min_R2 1 QQGFNYCTSAISSPLTK 17 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;H0YMW2;A0A087WY36;H0YLH1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 QQGFNYCTSAIS(0.459)S(0.526)PLT(0.015)K 201.4 4.45E-08 3933500 28662 26384 23516 21636 24938 22984 27322 13867 21844 26175 TRUE FALSE 30856.38476 25073.80893 24300.0117 19868.26959 23958.80882 23858.67223 23734.58858 15679.46451 23743.95164 25320.91189 1.218612698 0.990241151 0.959681539 0.784658533 0.946206397 0.942251698 0.937351257 0.619229852 0.937721032 1 14.62804174 -4.128184386 1.012894721 0.871767529 2.090903036 0.471883962 0.105513207 5.189800406 1.680448689 0.033749722 9.450662898 7.44E-05 4.128184386 1.219135507 QQGHEPVS(ph)PR ddPTM_A459_MK2206_30min_R1 2 QQGHEPVSPR 10 0 Q9BTA9-5;Q9BTA9;A0A0A0MRT2;Q9BTA9-2 Q9BTA9-5 WAC WW domain-containing adapter protein with coiled-coil 1 QQGHEPVS(1)PR;QQGHEPVS(1)PR 86.738 0.022912 52758000 9259.3 9611.7 9571.5 7960.7 9557.9 7838.7 9771.8 7984.7 7475.6 8723.7 TRUE FALSE 8471.747912 8985.976583 8921.813248 8573.834493 9177.188604 8282.52042 9119.941052 7914.89061 8252.715372 9804.457817 0.864071025 0.91651948 0.909975178 0.874483286 0.93602204 0.844770876 0.930183109 0.807274686 0.841730928 1 13.25922214 -6.768553823 24.99057537 0.875583548 0.900232832 0.005883258 0.053697152 593.1950723 2083678.097 0.017881258 0.016095793 1.70E-07 6.768553823 0.024649285 QQGHEPVS(ph)PR ddPTM_A459_MK2206_30min_R2 2 QQGHEPVSPR 10 0 Q9BTA9-5;Q9BTA9;A0A0A0MRT2;Q9BTA9-2 Q9BTA9-5 WAC WW domain-containing adapter protein with coiled-coil 1 QQGHEPVS(1)PR;QQGHEPVS(1)PR 78.985 0.03385 137515000 31686.5 36899.2 36401 41305 36125 40894 42510 33186 34215 40043 TRUE FALSE 34112.4428 35066.83938 37614.59117 37930.24937 34706.55099 42450.24983 36928.38594 37523.52414 37190.95885 38736.40019 0.880630173 0.905268409 0.971039926 0.979188804 0.89596738 1.095874929 0.953325187 0.968688984 0.960103641 1 15.24140227 -5.180093636 2.377520306 0.978517933 0.880163002 0.349586655 0.047065168 0.368419402 3.813244668 0.01266103 0.051318556 6.61E-06 5.180093636 -0.098354931 QQLPQT(ph)PPSCLK ddPTM_A459_MK2206_30min_R1 2 QQLPQTPPSCLK 12 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 QQLPQT(0.995)PPS(0.005)CLK;QQLPQT(0.997)PPS(0.003)CLK 134.04 0.0038724 18567600 12217.1 12060.3 12164.1 9187.7 9992 9853.7 10701.6 10082.7 9714.3 9462.9 TRUE FALSE 11177.97149 11275.17228 11338.43478 9895.338246 9593.997482 10411.60798 9987.71579 9994.548017 10724.13625 10635.23549 1.051031874 1.060171379 1.066119767 0.930429632 0.902095444 0.978972961 0.939115622 0.939758036 1.008359077 1 13.37656436 -5.756529117 24.99819002 0.952338929 1.059214072 0.694504355 0.030939175 64.14184973 326541.5825 0.008456373 0.014072122 1.75E-06 5.756529117 0.106875143 QQLPQT(ph)PPSCLK ddPTM_A459_MK2206_30min_R2 3 QQLPQTPPSCLK 12 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 QQLPQT(0.991)PPS(0.009)CLK;QQLPQT(1)PPSCLK;QQLPQT(0.997)PPS(0.003)CLK 139.74 0.0026483 65723100 104876 106249 90844 107719 114465 100418 108025 73053 78641 109034 TRUE FALSE 112905.3872 100972.8292 93872.69362 98918.01312 109970.529 104239.4774 93841.18774 82601.27793 85481.05203 105476.2295 1.070434426 0.957304121 0.889989091 0.937822802 1.042609595 0.988274589 0.88969039 0.78312695 0.810429539 1 16.68655838 -7.407578869 4.1103173 0.845796286 0.976298758 0.352065698 0.072047792 0.241347895 6.921220717 0.032404027 0.020907379 3.91E-08 7.407578869 0.130502472 QQLS(ph)AEELDAQLDAYNAR ddPTM_A459_MK2206_30min_R1 2 QQLSAEELDAQLDAYNAR 18 0 E9PB61;Q86V81 E9PB61 ALYREF THO complex subunit 4 1 QQLS(1)AEELDAQLDAYNAR;QQLS(1)AEELDAQLDAYNAR 213.64 4.78E-12 13447200 1630.18 1370.49 1500.37 1308.28 1564.46 1667.89 1677.7 1499.6 1265.86 1207.47 TRUE FALSE 1491.524631 1281.270852 1398.529065 1409.043952 1502.144245 1762.32449 1565.783694 1486.489155 1397.450677 1357.0605 1.099084846 0.944151607 1.030557639 1.038305921 1.106910301 1.298633695 1.153805372 1.095374271 1.029762989 1 10.40626932 -6.26397043 3.957211887 1.131142488 1.020379537 0.190019493 0.083526079 0.313846805 11.55574675 0.027023833 0.033146163 5.45E-07 6.26397043 -0.110762951 QQLS(ph)EEEK ddPTM_A459_MK2206_30min_R2 1 QQLSEEEK 8 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 QQLS(1)EEEK 90.827 0.027722 14919000 67380 35834 51130 33436 25296 22231 46882 25245 19715 52400 TRUE FALSE 72538.66461 34054.53567 52834.64868 30704.17184 24302.75194 23077.01628 40726.33708 28544.60818 21429.77506 50690.19229 1.431019717 0.671817054 1.042305154 0.605722142 0.479436965 0.455256041 0.803436232 0.563118956 0.42275979 1 15.62941902 -1.672295421 0.847690694 0.61201865 199.9985883 0.533145242 0.209880016 373.1090492 1.398729341 0.070399729 142937.9877 0.021266919 1.672295421 199.3865697 QQLS(ph)PDRQPQSSGPDR ddPTM_A459_MK2206_30min_R2 1 QQLSPDRQPQSSGPDR 16 1 A0A1B0GUA8;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2;Q9H1H9;H0Y307 A0A1B0GUA8 KIF13A Kinesin-like protein KIF13A 1 QQLS(0.989)PDRQPQS(0.002)S(0.009)GPDR 103.66 0.020347 4100000 7116.7 7863 8924.6 10429 8623.1 10742 9558.5 8520.2 9451.1 11756 TRUE FALSE 7661.560024 7472.534854 9222.14171 9576.917339 8284.513766 11150.79434 8303.457468 9633.819394 10273.13959 11372.40268 0.673697567 0.657076175 0.810922895 0.842119085 0.728475239 0.980513498 0.730141 0.847122606 0.903339416 1 13.47324947 -2.188900388 0.125004396 1.037380176 2.92E-16 0.561705334 0.075700422 59.41456633 0.596663593 0.488445734 10.54585443 0.006472911 2.188900388 -1.037380176 QQLS(ph)PSPGQEAGILPETEK ddPTM_A459_MK2206_30min_R1 2 QQLSPSPGQEAGILPETEK 19 0 E5RJM0;B7ZLQ8;Q17RY0-2;Q17RY0 E5RJM0 CPEB4 Cytoplasmic polyadenylation element-binding protein 4 1 QQLS(0.928)PS(0.072)PGQEAGILPETEK;QQLS(0.933)PS(0.067)PGQEAGILPETEK 239 9.92E-30 11168300 7565.9 8052 8279.8 6696.8 7242.5 6270.3 6849.5 7179.2 6724 6792.4 TRUE FALSE 6922.380475 7527.813336 7717.790245 7212.588696 6954.015889 6625.318967 6392.582353 7116.433011 7422.983862 7633.893792 0.906795492 0.986104017 1.010989995 0.944811245 0.910939565 0.867881994 0.83739472 0.932215355 0.972371907 1 12.8982034 QQLS(ph)PSPGQEAGILPETEK ddPTM_A459_MK2206_30min_R2 1 QQLSPSPGQEAGILPETEK 19 0 E5RJM0;B7ZLQ8;Q17RY0-2;Q17RY0 E5RJM0 CPEB4 Cytoplasmic polyadenylation element-binding protein 4 1 QQLS(0.987)PS(0.013)PGQEAGILPETEK 188.54 2.64E-15 3138800 45998 47508 47620 43875 44562 37981 42014 34880 37138 44358 TRUE FALSE 49519.64225 45148.8218 49207.62703 40290.27215 42812.27197 39426.39357 36497.51133 39438.93576 40368.19611 42910.60209 1.154018817 1.052160063 1.146747532 0.938935139 0.997708489 0.918803085 0.85054764 0.919095371 0.9407511 1 15.38904652 -5.769850007 24.73254098 0.932653176 1.111093932 0.74924938 0.047514963 76.73674711 225655.0222 0.013727555 0.020751244 1.70E-06 5.769850007 0.178440756 QQLSPDRQPQS(ph)SGPDR ddPTM_A459_MK2206_30min_R1 1 QQLSPDRQPQSSGPDR 16 1 A0A1B0GUA8;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2;Q9H1H9;H0Y307 A0A1B0GUA8 KIF13A Kinesin-like protein KIF13A 1 QQLS(0.001)PDRQPQS(0.983)S(0.015)GPDR 174.4 1.40E-05 3224300 2741.9 2507.2 2827 2212.2 3014.1 2465 2602 2750.7 1974.1 2026.2 TRUE FALSE 2508.687007 2343.980824 2635.111116 2382.584027 2894.042015 2604.56617 2428.425328 2726.65092 2179.314759 2277.220953 1.101644091 1.029316378 1.15716093 1.04626827 1.270865706 1.143747675 1.06639864 1.197358963 0.957006283 1 11.15305856 -8.274007615 24.98551962 0.97850311 1.125067986 0.421398712 0.069393531 839.2871401 1668476.696 0.064777709 0.017182829 5.32E-09 8.274007615 0.146564875 QQLSPDRQPQS(ph)SGPDR ddPTM_A459_MK2206_30min_R2 1 QQLSPDRQPQSSGPDR 16 1 A0A1B0GUA8;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2;Q9H1H9;H0Y307 A0A1B0GUA8 KIF13A Kinesin-like protein KIF13A 1 QQLS(0.002)PDRQPQS(0.991)S(0.008)GPDR 168.08 6.48E-05 4273300 12116 14942 12690 18580 15957 17645 17596 14036 15983 19321 TRUE FALSE 13043.61028 14200.00201 13113.07827 17061.95457 15330.448 18316.49284 15285.62406 15870.55339 17373.17245 18690.55735 0.697871659 0.759742031 0.701588402 0.912864943 0.820224229 0.979986444 0.817826016 0.849121462 0.929516018 1 14.19002197 -2.534922496 0.209646835 0.971277699 4.56E-16 0.622720172 0.062883475 24.04373982 0.431749184 0.111206022 7.129182345 0.002917948 2.534922496 -0.971277699 QQLSPDRQPQSS(ph)GPDR ddPTM_A459_MK2206_30min_R1 1 QQLSPDRQPQSSGPDR 16 1 A0A1B0GUA8;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2;Q9H1H9;H0Y307 A0A1B0GUA8 KIF13A Kinesin-like protein KIF13A 1 QQLS(0.022)PDRQPQS(0.07)S(0.908)GPDR 130.64 0.0036534 3595200 1424.8 1176.2 1136.6 1101.4 1154.7 1136.7 1380.7 1222.1 1040.6 1159.9 TRUE FALSE 1303.613278 1099.629166 1059.450759 1186.230019 1108.705854 1201.058972 1288.596022 1211.415309 1148.774094 1303.597169 1.000012358 0.843534485 0.812713301 0.909966704 0.850497286 0.921342114 0.988492498 0.929286545 0.881233959 1 10.34828241 -6.960375732 6.868018992 0.945436785 0.879091638 0.236583442 0.055930676 0.290667088 37.45708879 0.019899821 0.017407557 1.10E-07 6.960375732 -0.066345147 QQLSPS(ph)PGQEAGILPETEK ddPTM_A459_MK2206_30min_R1 2 QQLSPSPGQEAGILPETEK 19 0 E5RJM0;B7ZLQ8;Q17RY0-2;Q17RY0 E5RJM0 CPEB4 Cytoplasmic polyadenylation element-binding protein 4 1 QQLS(0.296)PS(0.704)PGQEAGILPETEK;QQLS(0.024)PS(0.976)PGQEAGILPETEK 257.72 3.70E-47 5761700 7614.9 7772.2 8349.2 6507.3 7509.4 6394.5 7430.2 7507.5 6431.4 6259.9 TRUE FALSE 6967.212768 7266.228367 7782.479566 7008.493374 7210.284697 6756.551064 6934.544915 7441.862719 7099.967045 7035.423672 0.990304649 1.032806083 1.106184919 0.996172185 1.02485437 0.960361647 0.98566131 1.057770373 1.009174056 1 12.78042159 QQLSPS(ph)PGQEAGILPETEK ddPTM_A459_MK2206_30min_R2 5 QQLSPSPGQEAGILPETEK 19 0 E5RJM0;B7ZLQ8;Q17RY0-2;Q17RY0 E5RJM0 CPEB4 Cytoplasmic polyadenylation element-binding protein 4 1 QQLS(0.125)PS(0.875)PGQEAGILPETEK;QQLS(0.029)PS(0.971)PGQEAGILPETEK;QQLS(0.452)PS(0.548)PGQEAGILPETEK;QQLS(0.007)PS(0.993)PGQEAGILPETEK;QQLS(0.037)PS(0.963)PGQEAGILPETEK 194.27 3.27E-15 52474200 197163 227038 237681 218482 230103 206663 244766 176134 197023 243384 TRUE FALSE 212257.9509 215763.6231 245605.1659 200631.3217 221068 214527.7053 212627.9302 199155.3186 214159.7044 235442.4 0.901528148 0.916417871 1.043164553 0.852146095 0.938947276 0.911168529 0.90309957 0.845877032 0.90960551 1 17.84501463 -5.812459951 24.99996033 0.903401119 0.949978903 0.122453385 0.053653864 198.5785156 97301.96928 0.014726209 0.021842534 1.54E-06 5.812459951 0.046577784 QQPPEPEWIGDGES(ph)TSPSDKVVK ddPTM_A459_MK2206_30min_R1 1 QQPPEPEWIGDGESTSPSDKVVK 23 1 Q5STZ8;Q8NE71;Q8NE71-2;A0A0G2JIC2 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 QQPPEPEWIGDGES(0.405)T(0.288)S(0.288)PS(0.019)DKVVK 88.541 0.00011511 32954000 2974.2 2658.6 3033.7 2941.1 2844.2 2503.9 2024.1 2096 1714.5 1241.6 TRUE FALSE 2721.228672 2485.524657 2827.780896 3167.624032 2730.909491 2645.668654 1889.075982 2077.674893 1892.72841 1395.418782 1.950116128 1.781203385 2.026474728 2.270016767 1.957053701 1.895967497 1.353769927 1.488925705 1.356387369 1 10.44648244 -7.226492702 2.607608139 1.319889876 2.001833456 0.810688207 0.161456332 0.133807987 1.797039175 0.076295318 0.052450502 5.94E-08 7.226492702 0.681943581 QQPPEPEWIGDGES(ph)TSPSDKVVK ddPTM_A459_MK2206_30min_R2 2 QQPPEPEWIGDGESTSPSDKVVK 23 1 Q5STZ8;Q8NE71;Q8NE71-2;A0A0G2JIC2 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 QQPPEPEWIGDGES(0.621)T(0.222)S(0.152)PS(0.005)DKVVK;QQPPEPEWIGDGES(0.491)T(0.34)S(0.166)PS(0.003)DKVVK 97.124 3.72E-05 48601000 314140 532750 442430 518540 575580 462910 625500 409520 471290 460380 TRUE FALSE 338190.7999 506294.4097 457180.3954 476173.6233 552979.8371 480526.3644 543371.0986 463045.6701 512281.9523 445357.8383 0.759368694 1.136826089 1.026546197 1.069193314 1.241652868 1.078966896 1.220077546 1.039716 1.15027043 1 18.76460546 -4.758928791 24.99611899 1.111434417 0.75936823 0.649848325 0.076497572 40.19785948 400137.9838 0.01823522 0.120209307 1.74E-05 4.758928791 -0.352066187 QQPPEPEWIGDGEST(ph)SPSDKVVK ddPTM_A459_MK2206_30min_R1 2 QQPPEPEWIGDGESTSPSDKVVK 23 1 Q5STZ8;Q8NE71;Q8NE71-2;A0A0G2JIC2 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 QQPPEPEWIGDGES(0.115)T(0.519)S(0.354)PS(0.012)DKVVK;QQPPEPEWIGDGES(0.179)T(0.603)S(0.149)PS(0.069)DKVVK 117.53 1.49E-05 61532000 9946 10138.3 9406.5 9356 8991.9 7758.9 6668.2 8268.8 6633.6 3601.9 TRUE FALSE 9100.040471 9478.294827 8768.012988 10076.60074 8633.733582 8198.202213 6223.376545 8196.506753 7323.186459 4048.130565 2.247961207 2.341400475 2.165941253 2.489198552 2.132770533 2.025182262 1.537345806 2.024763436 1.809029215 1 11.98304011 -9.650897597 0.191690833 0.332789733 2.565547346 0.818192551 0.17627757 4.792876739 0.31309384 2.690614567 0.722449414 2.23E-10 9.650897597 2.232757613 QQPPEPEWIGDGESTS(ph)PSDKVVK ddPTM_A459_MK2206_30min_R1 1 QQPPEPEWIGDGESTSPSDKVVK 23 1 Q5STZ8;Q8NE71;Q8NE71-2;A0A0G2JIC2 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 QQPPEPEWIGDGES(0.117)T(0.326)S(0.553)PS(0.004)DKVVK 117 5.93E-06 29708000 4298.5 4894.1 4642.2 4628.1 4379.8 3365.4 3166 3437.2 2939.4 1662.2 TRUE FALSE 3932.890003 4575.4932 4327.100398 4984.557064 4205.343292 3555.94604 2954.801917 3407.148923 3244.961149 1868.125885 2.105259626 2.44924244 2.316278808 2.668212621 2.251102736 1.903483094 1.581693151 1.823832618 1.737014178 1 10.86737596 -6.892938566 2.175957545 1.600488722 2.392260923 0.712972194 0.24576251 0.176969334 1.708605722 0.098377949 0.083062413 1.28E-07 6.892938566 0.791772201 QQPPLGPSSS(ph)LLSLPGLK ddPTM_A459_MK2206_30min_R1 2 QQPPLGPSSSLLSLPGLK 18 0 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 QQPPLGPS(0.003)S(0.054)S(0.943)LLSLPGLK;QQPPLGPS(0.001)S(0.063)S(0.936)LLSLPGLK 301.7 1.02E-95 38919000 12235.1 10032.8 9652.3 7405.6 10535.9 9417.1 11552.1 10069.7 9859.7 9789.8 TRUE FALSE 11194.4405 9379.662896 8997.128769 7975.980595 10116.23279 9950.288064 10781.48049 9981.661675 10884.6511 11002.63433 1.017432749 0.852492468 0.817724964 0.724915539 0.919437335 0.904355063 0.979899919 0.907206526 0.989276819 1 13.42556137 -6.784628926 2.23821174 0.958739629 0.850838322 0.299659844 0.073435963 0.403124466 4.14707006 0.029901106 0.027165436 1.64E-07 6.784628926 -0.107901307 QQPPLGPSSS(ph)LLSLPGLK ddPTM_A459_MK2206_30min_R2 2 QQPPLGPSSSLLSLPGLK 18 0 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 QQPPLGPSS(0.186)S(0.81)LLS(0.004)LPGLK;QQPPLGPS(0.007)S(0.226)S(0.767)LLSLPGLK 258.9 1.60E-42 42478000 132507 99576 107832 107656 115577 100866 125051 79644 81882 106007 TRUE FALSE 142651.8378 94631.20064 111427.0651 98860.16043 111038.8663 104704.5263 108631.6535 90053.74426 89003.94835 102548.0003 1.391073813 0.922799083 1.086584475 0.964037916 1.082798943 1.02102943 1.059324933 0.878161876 0.867924758 1 16.64593983 -4.75536588 24.99728011 0.991872549 1.391074467 0.721875709 0.075195137 112.311807 462207.2729 0.019446432 0.173544157 1.76E-05 4.75536588 0.399201918 QQQEPTGEPS(ph)PK ddPTM_A459_MK2206_30min_R1 3 QQQEPTGEPSPK 12 0 F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5;P52926-2;P52926 F5H2U8 HMGA2 High mobility group protein HMGI-C 1 QQQEPT(0.002)GEPS(0.998)PK;QQQEPT(0.001)GEPS(0.999)PK;QQQEPT(0.119)GEPS(0.881)PK 164.7 0.00051259 18826700 8292.7 9830.6 9910.7 8616.1 5285.8 4658.43 6399.3 7019.6 9017 9062.8 TRUE FALSE 7587.362318 9190.626153 9237.989297 9279.713515 5075.255393 4922.186281 5972.414373 6958.228377 9954.349418 10185.56808 0.744913024 0.902318464 0.906968489 0.911064895 0.49827907 0.483251031 0.586360459 0.683145831 0.977299384 1 13.31423883 -6.233018774 24.88888984 0.671888206 0.871791566 0.160236998 0.171437767 1059.694282 928010.1365 0.051879322 0.066962915 5.85E-07 6.233018774 0.19990336 QQQEPTGEPS(ph)PK ddPTM_A459_MK2206_30min_R2 2 QQQEPTGEPSPK 12 0 F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5;P52926-2;P52926 F5H2U8 HMGA2 High mobility group protein HMGI-C 1 QQQEPTGEPS(1)PK;QQQEPT(0.022)GEPS(0.978)PK 155.37 0.00042539 32517000 71272 66885 71761 47820 56115 43299 66724 52256 46415 77924 TRUE FALSE 76728.63912 63563.58816 74153.47592 43912.95303 53911.64314 44946.77379 57963.05865 59086.03862 50452.0928 75381.34626 1.017873027 0.843227022 0.983711218 0.582544027 0.715185465 0.596258571 0.768931062 0.783828381 0.66929148 1 16.20191994 -5.74663465 24.99986961 0.717180009 0.937766143 0.411476467 0.118160587 220.553675 372432.9022 0.030276916 0.052162723 1.79E-06 5.74663465 0.220586134 QQQLEEEAAKPPEPEKPVS(ph)PPPIESK ddPTM_A459_MK2206_30min_R2 2 QQQLEEEAAKPPEPEKPVSPPPIESK 26 2 C9J0Q5;C9JE98;C9J330;H7C1Y3;H0YGK8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 QQQLEEEAAKPPEPEKPVS(0.999)PPPIES(0.001)K;QQQLEEEAAKPPEPEKPVS(0.994)PPPIES(0.006)K 58.191 0.0031153 41663000 147448 151050 147686 122171 122862 72198 153403 113262 91126 167043 TRUE FALSE 158736.7322 143549.0766 152609.7775 112189.2385 118037.8205 74945.54548 133261.0018 128065.7323 99051.97476 161592.4006 0.982327954 0.888340517 0.944411847 0.694272986 0.730466409 0.46379375 0.824673693 0.792523236 0.612974214 1 17.30199983 -5.759845987 24.98921517 0.715315401 0.933358195 0.331511141 0.133387267 44.97531074 705322.3362 0.035724847 0.057913309 1.74E-06 5.759845987 0.218042793 QQQLEEEAAKPPEPEKPVS(ph)PPPVEQK ddPTM_A459_MK2206_30min_R2 2 QQQLEEEAAKPPEPEKPVSPPPVEQK 26 2 O75376-2;O75376;A0A088AWL3;O75376-3;E7EVU5;E7EW50;J3KS51 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 QQQLEEEAAKPPEPEKPVS(1)PPPVEQK;QQQLEEEAAKPPEPEKPVS(1)PPPVEQK 64.962 0.0006715 79450000 275360 226870 255900 184863 205451 105733 284560 193951 168501 285840 TRUE FALSE 296441.7733 215603.9657 264431.5783 169759.1016 197383.9614 109756.7434 247196.9302 219301.0616 183156.9124 276513.0642 1.072071492 0.779724337 0.956307721 0.61392796 0.713832317 0.396931493 0.893979208 0.793094758 0.662380683 1 18.07698812 -3.660574717 9.647568631 0.77207077 0.904528574 0 0.192981847 10483241.6 1136472.497 0.045245457 5482098.434 0.000218487 3.660574717 0.132457804 QQQQMEQER ddPTM_A459_MK2206_30min_R2 1 QQQQMEQER 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 134.26 0.04052 2765200 9060 11809 11500 11319 8861.9 12285 8850.7 9305.1 10080 11076 FALSE TRUE 9753.640566 11222.58223 11883.40426 10394.20149 8513.937279 12752.51428 7688.592458 10521.30852 10956.74018 10714.59103 0.910313846 1.047411161 1.109086127 0.970097829 0.794611503 1.190200751 0.717581515 0.981960813 1.022599944 1 13.38728916 -5.985686478 24.17272043 0.944332539 1.027252409 0.055732212 0.128725247 434.8237339 734322.0611 0.035071373 0.051989847 1.03E-06 5.985686478 0.08291987 QQQQQQGEDGS(ph)PQAHR ddPTM_A459_MK2206_30min_R2 1 QQQQQQGEDGSPQAHR 16 0 A0A087WUX9;E9PEG3;A0A087WZ66;F5GZG9;P10275-3;P10275-4;P10275 A0A087WUX9 AR Androgen receptor 1 QQQQQQGEDGS(1)PQAHR 86.258 0.010358 5937300 25670 30826 27066 36873 28102 32167 31216 26694 28156 29459 TRUE FALSE 27635.31494 29295.22567 27968.36693 33860.35795 26998.57428 33391.13773 27117.3017 30182.99745 30604.95799 28497.75524 0.969736553 1.027983622 0.981423508 1.18817632 0.947393016 1.171711156 0.951559218 1.059135963 1.073942762 1 14.79856066 QQQQQQGEDGS(ph)PQAHRR ddPTM_A459_MK2206_30min_R2 1 QQQQQQGEDGSPQAHRR 17 1 A0A087WUX9;E9PEG3;A0A087WZ66;F5GZG9;P10275-3;P10275-4;P10275 A0A087WUX9 AR Androgen receptor 1 QQQQQQGEDGS(1)PQAHRR 66.702 0.020815 529670 0 0 0 716.49 0 487.08 0 0 0 0 TRUE FALSE 0 0 0 657.9504751 0 505.6161707 0 0 0 0 0 QQQQQQQHQQPNR ddPTM_A459_MK2206_30min_R2 3 QQQQQQQHQQPNR 13 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;C9JH18 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 0 ;; 205.07 3.74E-05 2221770 1003.4 618.3 1958.9 738.85 955.48 1039 1226.4 1078 1010.8 0 FALSE TRUE 1080.221075 587.5961211 2024.208748 678.4835915 917.9630543 1078.539873 1065.372207 1218.898301 1098.717557 0 0 QQS(ph)LPPPK ddPTM_A459_MK2206_30min_R2 2 QQSLPPPK 8 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 QQS(1)LPPPK;QQS(1)LPPPK 87.298 0.032667 12292500 63258 62596 72223 73599 78403 67117 75826 62122 67613 87044 TRUE FALSE 68101.08112 59487.57366 74630.87877 67585.72627 75324.50428 69671.18447 65869.95512 70241.5587 73493.85652 84203.76141 0.808765309 0.70647169 0.886312886 0.802644979 0.89455035 0.827411784 0.782268559 0.834185522 0.872809662 1 16.36159706 -14.52287875 0.173410076 1.704815114 0.783082925 0.556850537 0.049592837 103.6750375 0.982159657 25.10021519 0.173400702 3.00E-15 14.52287875 -0.921732189 QQS(ph)PQEPK ddPTM_A459_MK2206_30min_R1 2 QQSPQEPK 8 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 QQS(1)PQEPK;QQS(1)PQEPK 111.86 0.011421 64338000 15667.3 16745.7 13392.2 13266.2 8500.7 8128.6 12613.9 14308.3 728.08 9767 TRUE FALSE 14334.71386 15655.55189 12483.17478 14287.96502 8162.099118 8588.834307 11772.44975 14183.20404 803.7665215 10977.0097 1.305885142 1.426212814 1.137210873 1.301626346 0.743563078 0.782438437 1.072464184 1.292082674 0.073222721 1 13.42219748 -6.253231236 23.98307904 0.851914927 1.291159282 0.357087861 0.304879236 427.3658452 1248702.504 0.089020853 0.112810114 5.58E-07 6.253231236 0.439244355 QQS(ph)PQEPK ddPTM_A459_MK2206_30min_R2 2 QQSPQEPK 8 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 QQS(1)PQEPK;QQS(1)PQEPK 91.701 0.026497 94184000 505760 590090 548200 545590 617320 407370 561490 525600 494160 577370 TRUE FALSE 544481.3745 560786.9887 566476.7144 501013.5517 593080.915 422872.7508 487765.6885 594297.7247 537141.1436 558530.4642 0.974846332 1.00404011 1.014227067 0.897020993 1.061859564 0.757116716 0.873301852 1.064038155 0.96170429 1 19.09127645 -5.741859407 24.90285132 0.941726698 0.998338075 0.071460884 0.086478395 671.4906853 854030.4639 0.024318251 0.04204251 1.81E-06 5.741859407 0.056611377 QQS(ph)SPLVNKEEEHAPELSANQTVNK ddPTM_A459_MK2206_30min_R2 1 QQSSPLVNKEEEHAPELSANQTVNK 25 1 Q9BRR8 Q9BRR8 GPATCH1 G patch domain-containing protein 1 1 QQS(0.5)S(0.5)PLVNKEEEHAPELSANQTVNK 68.705 0.00064745 8020800 74798 69341 66696 77118 77118 57231 82859 64518 60856 84875 TRUE FALSE 80524.59239 65897.62677 68919.61135 70817.21271 74089.95983 59408.96581 71979.51377 72950.72412 66149.14488 82105.5357 0.980744985 0.802596636 0.839402737 0.862514471 0.902374721 0.723568336 0.876670655 0.88849946 0.805659988 1 16.32519187 -10.68856732 4.895483649 1.000012251 0.851227146 0.312097088 0.065140484 8.34E-06 1.42E-06 0.060380475 0.014643211 2.05E-11 10.68856732 -0.148785104 QQSELQSQVR ddPTM_A459_MK2206_30min_R1 2 QQSELQSQVR 10 0 Q14847;Q14847-2;C9J9W2 Q14847 LASP1 LIM and SH3 domain protein 1 0 ; 142.98 0.015788 5457000 698.08 780.56 476.79 529.99 773.67 837.33 795.54 689 710.95 545.28 FALSE TRUE 638.7046302 729.7454021 444.4268232 570.8099216 742.8530856 884.738901 742.4709781 682.9761456 784.8557967 612.8334031 1.042215759 1.190772889 0.725200064 0.931427561 1.212161547 1.443685831 1.211538037 1.114456461 1.280700094 1 9.259351125 -6.27106995 19.40294365 1.227865714 0.970344458 0.368317627 0.151668036 34.91976454 70353.26328 0.048179791 0.055696582 5.36E-07 6.27106995 -0.257521256 QQSFCAKPPPS(ph)PLSPVPSVVK ddPTM_A459_MK2206_30min_R2 1 QQSFCAKPPPSPLSPVPSVVK 21 1 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 QQSFCAKPPPS(0.964)PLS(0.015)PVPS(0.021)VVK 58.924 0.0131 9740300 33470 33139 32964 34281 33141 25248 24482 19411 24028 22262 TRUE FALSE 36032.48893 31493.36545 34063.00331 31480.13264 31839.71782 26208.83033 21267.48399 21948.08435 26117.91201 21535.59276 1.67315984 1.462386747 1.581707255 1.461772285 1.478469535 1.217000647 0.987550435 1.019153946 1.212778877 1 14.39443541 -6.842050852 2.322912169 1.055811193 1.538219748 0.884993382 0.081891147 0.093096741 1.027279221 0.0319183 0.028002591 1.44E-07 6.842050852 0.482408555 QQSHFAMMHGGTGFAGIDS(ph)SSPEVK ddPTM_A459_MK2206_30min_R1 1 QQSHFAMMHGGTGFAGIDSSSPEVK 25 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QQSHFAMMHGGTGFAGIDS(0.515)S(0.304)S(0.181)PEVK 177.53 1.42E-20 41617000 2039.4 2204.8 2758.8 2242.3 2671.9 3167.7 4717.4 5296.2 4785.4 4986.6 TRUE FALSE 1865.938321 2061.267119 2571.540342 2415.002335 2565.472565 3347.052437 4402.710853 5249.895882 5282.859455 5604.377655 0.332943002 0.367795899 0.458844942 0.430913561 0.457762257 0.597221073 0.785584257 0.936749128 0.942630883 1 12.45233846 -7.250500635 1.027463572 0.99570905 0.386764311 0.984401534 0.030836187 0.063325364 0.13028859 0.023799906 0.013666105 5.62E-08 7.250500635 -0.608944739 down QQSHFAMMHGGTGFAGIDS(ph)SSPEVK ddPTM_A459_MK2206_30min_R2 4 QQSHFAMMHGGTGFAGIDSSSPEVK 25 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QQSHFAMMHGGTGFAGIDS(0.466)S(0.317)S(0.217)PEVK;QQSHFAMMHGGT(0.002)GFAGIDS(0.333)S(0.333)S(0.333)PEVK;QQSHFAMMHGGT(0.014)GFAGIDS(0.413)S(0.309)S(0.264)PEVK;QQSHFAMMHGGTGFAGIDS(0.454)S(0.32)S(0.226)PEVK 109.48 2.79E-07 30215700 40229.3 49643.9 54149.1 60229 64886.5 67026 105743 73471 90504 112334 TRUE FALSE 43309.28614 47178.65611 55954.40397 55308.09804 62338.72998 69576.7214 91858.81708 83073.91196 98375.87433 108668.5508 0.398544803 0.434151885 0.5149089 0.508961403 0.573659348 0.640265476 0.845311881 0.764470598 0.905283761 1 16.72957495 -7.11833497 0.460674349 1.002840376 0.377909627 0.96026448 0.039470491 0.191662408 0.089246629 0.039356816 0.043182418 7.61E-08 7.11833497 -0.624930749 down QQSHFAMMHGGTGFAGIDSS(ph)SPEVK ddPTM_A459_MK2206_30min_R2 1 QQSHFAMMHGGTGFAGIDSSSPEVK 25 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QQSHFAMMHGGTGFAGIDS(0.349)S(0.393)S(0.258)PEVK 127.44 4.56E-08 14905000 47174 46758 53228 55391 67520 65623 116890 90138 113500 142660 TRUE FALSE 50785.67771 44436.06571 55002.59495 50865.37811 64868.82554 68120.32925 101542.2026 101919.3461 123372.0248 138005.0159 0.367998782 0.321988773 0.398555042 0.3685763 0.470046868 0.493607633 0.735786319 0.738519143 0.893967687 1 17.07436118 -7.523717132 0.673343922 0.99568609 0.339230664 0.976451041 0.035429935 0.09147375 0.080949269 0.030306845 0.017368645 2.99E-08 7.523717132 -0.656455426 down QQSHFAMMHGGTGFAGIDSSS(ph)PEVK ddPTM_A459_MK2206_30min_R1 2 QQSHFAMMHGGTGFAGIDSSSPEVK 25 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QQSHFAMMHGGTGFAGIDS(0.268)S(0.162)S(0.57)PEVK;QQSHFAMMHGGT(0.007)GFAGIDS(0.289)S(0.217)S(0.486)PEVK 170.77 1.84E-16 56669000 2641.41 2966.68 3370.5 2625.16 3107.38 3645.3 5619 6006.2 5257.3 5049.7 TRUE FALSE 2416.744209 2773.548593 3141.719851 2827.350278 2983.606475 3851.693736 5244.166762 5953.688427 5803.815148 5675.294959 0.425835877 0.488705629 0.55357825 0.498185609 0.52571831 0.678677278 0.924034222 1.049053568 1.022645552 1 12.47047966 -7.165972107 1.703051017 1.032551376 0.494867251 0.98148329 0.032663038 0.046673216 0.266363692 0.017759769 0.011780378 6.82E-08 7.165972107 -0.537684124 down QQSHFAMMHGGTGFAGIDSSS(ph)PEVK ddPTM_A459_MK2206_30min_R2 3 QQSHFAMMHGGTGFAGIDSSSPEVK 25 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QQS(0.001)HFAMMHGGT(0.001)GFAGIDS(0.142)S(0.234)S(0.623)PEVK;QQSHFAMMHGGTGFAGIDS(0.173)S(0.026)S(0.801)PEVK;QQSHFAMMHGGTGFAGIDS(0.255)S(0.169)S(0.576)PEVK 123.03 1.44E-07 38863500 47782.5 67418 62743 61407 77538 73952 123957 93907 103392 149372 TRUE FALSE 51440.76494 64070.12015 64834.8203 56389.85167 74493.46852 76766.29518 107681.297 106180.9673 112384.8493 144498.0039 0.355996371 0.44339796 0.448690076 0.390246579 0.515532855 0.531261977 0.745209582 0.734826534 0.777760566 1 17.14069004 -7.640604166 0.484873893 0.99335486 0.36868968 0.951253921 0.043788425 0.187069245 0.102063251 0.046402492 0.034810527 2.29E-08 7.640604166 -0.624665181 down QQSNEHLR ddPTM_A459_MK2206_30min_R2 2 QQSNEHLR 8 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 114.89 0.014204 3328000 15004.2 4039.3 5240.6 4784.6 8339.7 6655.1 6886.7 38840 20621.8 9000.3 FALSE TRUE 16152.93309 3838.714236 5415.318988 4393.682875 8012.241474 6908.364494 5982.468018 43916.52136 22415.44689 8706.620948 1.85524708 0.440895987 0.621977116 0.504636977 0.920246962 0.793461038 0.687117086 5.044037362 2.574528858 1 13.0878972 -7.724128971 24.99835445 3.106963992 0.798151011 0.4650262 0.993205544 114.5522331 76751.12761 0.435505361 0.251431336 1.89E-08 7.724128971 -2.308812982 QQSS(ph)PLVNKEEEHAPELSANQTVNK ddPTM_A459_MK2206_30min_R2 1 QQSSPLVNKEEEHAPELSANQTVNK 25 1 Q9BRR8 Q9BRR8 GPATCH1 G patch domain-containing protein 1 1 QQS(0.221)S(0.779)PLVNKEEEHAPELSANQTVNK 79.143 9.56E-05 5197700 44457 38751 38527 42363 41836 32159 46268 39167 30306 44291 TRUE FALSE 47860.6621 36826.68169 39811.47095 38901.80739 40193.30843 33382.83328 40192.95602 44286.26138 32941.9611 42845.7883 1.117044732 0.85951696 0.929180499 0.907949391 0.938092401 0.779139201 0.938084176 1.033619946 0.768849458 1 15.38686578 -4.753676431 24.99861976 0.905917552 1.117045112 0.382120852 0.080491028 293.9679681 946573.0769 0.019056449 0.200691477 1.76E-05 4.753676431 0.21112756 QQSSSSRES(ph)PVPK ddPTM_A459_MK2206_30min_R1 1 QQSSSSRESPVPK 13 1 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 QQSS(0.005)S(0.026)S(0.026)RES(0.942)PVPK 118.08 0.016576 5192100 1849.4 2221.1 2576.8 1831.8 1967.9 1961.9 2244.9 2325.1 1647.9 1743 TRUE FALSE 1692.098818 2076.505986 2401.893995 1972.885553 1889.514376 2072.981083 2095.146817 2304.771896 1819.205102 1958.935999 0.863784636 1.060017268 1.22612173 1.007120985 0.964561567 1.058217871 1.069533062 1.176542724 0.928670004 1 10.93585455 -8.321094007 24.99888466 0.964334924 1.055443076 0.118372299 0.096899408 645.392268 270451.7468 0.094676675 0.024445425 4.77E-09 8.321094007 0.091108152 QQSTPQAANS(ph)PPNLGAK ddPTM_A459_MK2206_30min_R2 2 QQSTPQAANSPPNLGAK 17 0 Q9Y4C1;F8WE62 Q9Y4C1 KDM3A Lysine-specific demethylase 3A 1 QQSTPQAANS(1)PPNLGAK;QQSTPQAANS(1)PPNLGAK 223.76 2.48E-12 7457800 30617 36344 31942 35074 32064 27399 36565 25979.1 32147 37267 TRUE FALSE 32961.06106 34539.20981 33006.93034 32208.342 30805.00625 28441.68814 31763.97158 29374.65757 34943.08795 36050.98084 0.914290271 0.958065745 0.915562616 0.893410977 0.854484553 0.788929662 0.881084809 0.814808831 0.969268717 1 15.13775089 -5.779175357 2.568091031 0.870956122 0.935708836 0.072124685 0.061432472 0.497829752 6.696281893 0.017500555 0.031309941 1.66E-06 5.779175357 0.064752714 QQSTS(ph)SDRVSQTPESLDFLK ddPTM_A459_MK2206_30min_R2 1 QQSTSSDRVSQTPESLDFLK 20 1 Q12965 Q12965 MYO1E Unconventional myosin-Ie 1 QQS(0.051)T(0.051)S(0.454)S(0.18)DRVS(0.18)QT(0.042)PES(0.042)LDFLK 53.327 0.02917 6235300 13032 11991 10692 9583.6 12962 11800 17119 12888 9385.6 13975 TRUE FALSE 14029.73994 11395.54438 11048.46594 8800.589224 12453.04675 12249.05727 14871.25474 14572.50585 10201.94252 13518.99689 1.037779656 0.842928249 0.817254862 0.650979454 0.921151684 0.906062585 1.100026493 1.077928042 0.754637537 1 13.72270049 -6.770785387 2.690105906 0.98775194 0.834865303 0.184236456 0.125540764 0.424093173 6.293518215 0.048204559 0.04445643 1.70E-07 6.770785387 -0.152886637 QQT(ph)PEKLPIPMIAK ddPTM_A459_MK2206_30min_R2 2 QQTPEKLPIPMIAK 14 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 QQT(1)PEKLPIPMIAK;QQT(1)PEKLPIPMIAK 85.176 0.034515 10517600 102431 92536 94448 90931 91534 69166 110516 78347 65008 101595 TRUE FALSE 110273.1961 87940.7968 97596.84918 83501.64643 87939.91524 71798.1606 96005.11645 88587.22191 70662.27833 98279.96347 1.12203131 0.894798835 0.993049303 0.849630418 0.894789865 0.730547286 0.9768534 0.901376219 0.718989668 1 16.5846097 -1.522879355 0.82710276 0.866781727 73.48592719 0.369370908 0.093038107 616.5530109 1.904234723 0.031406661 84094.67597 0.029999958 1.522879355 72.61914547 QQTEKPES(ph)EDEWER ddPTM_A459_MK2206_30min_R1 3 QQTEKPESEDEWER 14 1 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 1 QQTEKPES(1)EDEWER;QQT(0.002)EKPES(0.998)EDEWER;QQTEKPES(1)EDEWER 236.75 1.16E-18 93980400 4042.2 4547 5565.6 4265.1 3612.66 3200.3 3966.09 3865.5 4693.2 4141.2 TRUE FALSE 3698.389664 4250.989474 5187.822579 4593.598741 3468.760102 3381.49822 3701.519373 3831.704341 5181.074935 4654.24312 0.794627519 0.913357846 1.114643658 0.986970088 0.745289838 0.72654095 0.795299961 0.823271205 1.113193875 1 12.18433086 -1.599238344 24.69707814 0.89291551 0.027116347 0 0.13853904 0 0 0.03383508 0 0.025162956 1.599238344 -0.865799163 QQTEKPES(ph)EDEWER ddPTM_A459_MK2206_30min_R2 3 QQTEKPESEDEWER 14 1 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 1 QQTEKPES(1)EDEWER;QQTEKPES(1)EDEWER;QQTEKPES(1)EDEWER 183.73 0.00036745 138525800 459491 440634 401531 389149 433203 352128 508942 353170 376537 434673 TRUE FALSE 494669.9842 418752.7563 414917.8431 357354.2819 416193.2735 365528.4778 442117.3041 399330.5316 409287.5076 420489.6556 1.176414158 0.995869341 0.986749228 0.84985273 0.989782431 0.869292438 1.051434436 0.949679799 0.973359278 1 18.68171078 -4.659708902 2.103886444 0.954466379 1.291712881 0.565948143 0.056847308 0.750442125 2.807317217 0.01456095 0.542536418 2.19E-05 4.659708902 0.337246502 QQTEKPES(ph)EDEWERTER ddPTM_A459_MK2206_30min_R1 1 QQTEKPESEDEWERTER 17 2 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 1 QQTEKPES(1)EDEWERTER 75.611 0.024762 5887200 1293.1 847.12 1696.2 1721.2 1159.1 961.05 716.15 1010 534.79 403.75 TRUE FALSE 1183.115055 791.972334 1581.06667 1853.767122 1112.930593 1015.46382 668.3769402 1001.169676 590.3833343 453.7695982 2.607303485 1.745318191 3.48429396 4.085260735 2.452633665 2.237840139 1.472943412 2.206339254 1.301064101 1 8.825816144 -6.903032539 2.154915692 1.594908922 2.937649936 0.506778161 0.643017702 0.306695662 2.901394709 0.28887034 0.242018901 1.25E-07 6.903032539 1.342741014 QQTQQVQSPVDS(ph)ATMSPVER ddPTM_A459_MK2206_30min_R2 1 QQTQQVQSPVDSATMSPVER 20 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 QQTQQVQS(0.001)PVDS(0.385)AT(0.229)MS(0.385)PVER 79.337 0.0045343 7069600 15090 15960 16296 15483 14985 16594 11805 8573.1 11964 11827 TRUE FALSE 16245.302 15167.44961 16839.30051 14217.98937 14396.61361 17225.4963 10254.98932 9693.633606 13004.60709 11441.08596 1.419909094 1.325700171 1.471827112 1.242713272 1.258325797 1.505582281 0.896330065 0.847265167 1.136658455 1 13.48193638 -7.268612231 24.94746085 0.957335498 1.362306345 0.774072399 0.105881777 253.9804808 883350.3006 0.043279761 0.029857219 5.39E-08 7.268612231 0.404970847 QQTQQVQSPVDSATMS(ph)PVER ddPTM_A459_MK2206_30min_R2 1 QQTQQVQSPVDSATMSPVER 20 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 QQTQQVQSPVDSATMS(1)PVER 302.04 1.17E-100 8158100 22984 27522 21539 20648 21541 16469 16303 15894 16176 18006 TRUE FALSE 24743.67271 26155.2975 22257.09951 18960.99235 20695.19211 17095.73934 14162.39652 17971.40037 17582.95924 17418.46569 1.42054261 1.501584466 1.277787602 1.088556976 1.18811797 0.981472171 0.813067968 1.031744167 1.00944363 1 14.08832993 -5.72778737 0.905371695 0.965602816 1.519007582 0.833177557 0.083005195 0.29987555 0.443401877 0.03645296 0.124027365 1.87E-06 5.72778737 0.553404767 QQVAFYGQTLGQAQAHS(ph)QEQ ddPTM_A459_MK2206_30min_R1 1 QQVAFYGQTLGQAQAHSQEQ 20 0 Q96I24;Q96I24-2 Q96I24 FUBP3 Far upstream element-binding protein 3 1 QQVAFYGQTLGQAQAHS(1)QEQ 150.69 1.32E-05 4987400 2595.5 2363.7 2348.7 2073.3 2772.1 2174.3 2361.3 2429.4 2182.8 2283.1 TRUE FALSE 2374.739095 2209.8227 2189.276788 2232.985925 2661.681387 2297.406987 2203.781985 2408.160012 2409.709871 2565.947665 0.92548228 0.861211135 0.853203991 0.870238297 1.037309304 0.895344445 0.85885695 0.938507065 0.939111076 1 11.32527603 -14.52287874 0.102910973 1.30746953 0.845766222 0.259114008 0.051354751 269.145295 1.865306898 17.48601828 0.844426892 3.00E-15 14.52287874 -0.461703309 QQVAFYGQTLGQAQAHS(ph)QEQ ddPTM_A459_MK2206_30min_R2 4 QQVAFYGQTLGQAQAHSQEQ 20 0 Q96I24;Q96I24-2 Q96I24 FUBP3 Far upstream element-binding protein 3 1 QQVAFYGQTLGQAQAHS(1)QEQ;QQVAFYGQTLGQAQAHS(1)QEQ;QQVAFYGQTLGQAQAHS(1)QEQ;QQVAFYGQTLGQAQAHS(1)QEQ 177.41 3.98E-13 27986900 120132 141953 129569 147204 134819 146893 141034 113831 122806 129921 TRUE FALSE 129329.3983 134903.8204 133888.7658 135176.9623 129525.3286 152483.116 122516.0664 128709.1025 133487.4439 125681.6884 1.0290234 1.073376895 1.065300502 1.075550178 1.030582341 1.213248469 0.974812385 1.024087949 1.062107341 1 16.93941494 QQVEQSSAS(ph)QTGIK ddPTM_A459_MK2206_30min_R1 1 QQVEQSSASQTGIK 14 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 QQVEQS(0.026)S(0.014)AS(0.956)QT(0.003)GIK 135.23 0.00060496 3782100 825.38 756.74 903.34 488.65 651.32 908.35 672.69 790.77 668.81 604.24 TRUE FALSE 755.1770968 707.4760885 842.0237976 526.2859077 625.3765452 959.779992 627.8160775 783.8563813 738.3351929 679.097813 1.112029935 1.0417882 1.239915343 0.774978063 0.920893181 1.413316276 0.924485495 1.154261384 1.087229525 1 9.407475576 QQVEQSSAS(ph)QTGIK ddPTM_A459_MK2206_30min_R2 2 QQVEQSSASQTGIK 14 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 QQVEQS(0.083)S(0.083)AS(0.807)QT(0.027)GIK;QQVEQS(0.004)S(0.015)AS(0.969)QT(0.013)GIK 168.47 7.70E-07 10112000 36593 32028 37764 40738 38960 33814 42891 25615 33429 48887 TRUE FALSE 39394.58822 30437.53609 39023.03291 37409.57509 37430.23464 35100.81546 37259.36018 28962.96845 36336.59399 47291.82119 0.833010597 0.643610995 0.825153947 0.791036888 0.791473741 0.742217461 0.787860548 0.612430812 0.768348376 1 15.52930308 -11.53135256 3.389097333 1.264601483 0.752329838 0.529931829 0.06917805 104380262 1112604.341 215525569.4 0.016357039 2.94E-12 11.53135256 -0.512271645 QQVSWEQEFLVGS(ph)SPGGSGR ddPTM_A459_MK2206_30min_R2 1 QQVSWEQEFLVGSSPGGSGR 20 0 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 QQVSWEQEFLVGS(0.5)S(0.5)PGGSGR 215.88 7.36E-19 3442300 10847 10296 8612.3 11755 9415.5 11517 10706 8750 10034 13341 TRUE FALSE 11677.45466 9784.715612 8899.429784 10794.5789 9045.800161 11955.28751 9300.28934 9893.655043 10906.73918 12905.68426 0.904830339 0.758171005 0.689574423 0.836420501 0.700915967 0.926358282 0.720635121 0.766612203 0.845111267 1 13.65571902 -8.642960295 3.324627016 0.999918316 0.785195086 0.4115759 0.076433265 0.501344086 11.46512172 0.070310105 0.018584822 2.28E-09 8.642960295 -0.214723231 QQVSWEQEFLVGSS(ph)PGGSGR ddPTM_A459_MK2206_30min_R1 2 QQVSWEQEFLVGSSPGGSGR 20 0 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 QQVSWEQEFLVGS(0.224)S(0.776)PGGSGR;QQVSWEQEFLVGS(0.029)S(0.971)PGGSGR 280.63 6.05E-72 21612000 2245.98 2380.94 2541.4 1884.84 2649.77 2600.13 2507.05 2416.59 2197.23 2085.54 TRUE FALSE 2054.947607 2225.940373 2368.896849 2030.010703 2544.22405 2747.347114 2339.809269 2395.462008 2425.639921 2343.91244 0.876716882 0.94966874 1.010659276 0.866077874 1.085460364 1.172120198 0.998249435 1.021992958 1.034867975 1 11.19470296 -6.272769289 24.8583721 1.056521773 0.933549736 0.510128951 0.060365616 603.7161679 1324580.101 0.01946323 0.022257109 5.34E-07 6.272769289 -0.122972036 QQVSWEQEFLVGSS(ph)PGGSGR ddPTM_A459_MK2206_30min_R2 1 QQVSWEQEFLVGSSPGGSGR 20 0 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 QQVSWEQEFLVGS(0.043)S(0.957)PGGSGR 169.6 2.19E-09 4889400 27133 34558 31243 40423 33798 34266 35787 29761 32955 34768 TRUE FALSE 29210.32334 32841.89997 32284.62603 37120.31159 32470.9207 35570.01664 31088.12391 33650.86488 35821.36633 33633.52301 0.868488363 0.976463273 0.95989427 1.103670037 0.965433228 1.057576295 0.924319582 1.000515613 1.065049484 1 15.03761228 -4.540858848 1.45985309 1.010783494 0.736563195 0.415366957 0.050751367 2.108727042 2.667655452 0.014035512 0.995395293 2.88E-05 4.540858848 -0.274220299 QQYES(ph)VAAK ddPTM_A459_MK2206_30min_R2 1 QQYESVAAK 9 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 QQYES(1)VAAK 117.95 0.0073697 5150900 69849 111040 84173 139790 109760 129730 116550 112860 93461 81468 TRUE FALSE 75196.69314 105525.9151 86979.28581 128368.7098 105450.2709 134666.9661 101246.845 127611.1895 101590.0688 78809.70583 0.954155232 1.338996434 1.103662105 1.628843916 1.338036601 1.708761182 1.284700202 1.619231897 1.289055298 1 16.2660857 -5.742955517 24.99980758 1.439859066 1.152943661 0.2479967 0.216198837 307.4878059 415880.4857 0.053746148 0.092878111 1.81E-06 5.742955517 -0.286915405 QQYESVAAK ddPTM_A459_MK2206_30min_R2 2 QQYESVAAK 9 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 ; 166.07 0.012938 8408300 31282 34390 28151 34177 34095 29293 32834 28406 32931 31200 FALSE TRUE 33676.97397 32682.24261 29089.54029 31384.62977 32756.25899 30407.76564 28522.85636 32118.76173 35795.27885 30181.94656 1.115798609 1.082840782 0.96380597 1.039847768 1.085293121 1.007481926 0.945030378 1.064171314 1.18598311 1 14.88139823 -11.04125696 3.886946837 0.999344777 1.048800888 0.049403742 0.067686168 0.000403225 5.00E-05 0.068759557 0.01645619 9.09E-12 11.04125696 0.049456112 QRELEIEER ddPTM_A459_MK2206_30min_R2 1 QRELEIEER 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 112.71 0.026872 3723100 10561 16186 13711 15532 16061 16497 16273 12880 17469 14474 FALSE TRUE 11369.55828 15382.22678 14168.1179 14262.98592 15430.36444 17124.80489 14136.33555 14563.46022 18988.42204 14001.71457 0.812011859 1.09859594 1.011884497 1.018659954 1.102033924 1.223050564 1.009614607 1.040119776 1.356149774 1 13.77331588 -4.167590883 1.353563367 1.101431164 4.44E-131 0.367689247 0.109343038 6.684082102 3.362465805 0.030999557 15.20595501 6.80E-05 4.167590883 -1.101431164 QRPDLGS(ph)AQK ddPTM_A459_MK2206_30min_R2 1 QRPDLGSAQK 10 1 A0A3B3ITP6;A0A3B3IT92;P33991;A0A3B3IS57;E5RFR3;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 QRPDLGS(1)AQK 83.243 0.022343 66170000 131080 117130 104850 106300 144410 78586 124330 97810 89696 123760 TRUE FALSE 141115.5856 111313.4945 108345.6467 97614.94996 138739.7378 81576.6453 108005.3217 110594.1028 97497.59595 119721.7213 1.178696597 0.929768577 0.904979025 0.815348701 1.158851846 0.681385503 0.902136391 0.923759712 0.814368478 1 16.8693254 -4.750399859 3.514201978 0.896619607 1.223811895 0.329737209 0.118323689 0.378637968 7.340154028 0.0284645 0.346047998 1.78E-05 4.750399859 0.327192288 QRPVPQPSSAS(ph)LDEYTLMR ddPTM_A459_MK2206_30min_R1 5 QRPVPQPSSASLDEYTLMR 19 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 QRPVPQPS(0.018)S(0.066)AS(0.904)LDEY(0.002)T(0.011)LMR;QRPVPQPS(0.14)S(0.14)AS(0.513)LDEY(0.007)T(0.201)LMR;QRPVPQPS(0.01)S(0.219)AS(0.703)LDEYT(0.068)LMR;QRPVPQPS(0.08)S(0.08)AS(0.84)LDEYTLMR;QRPVPQPS(0.036)S(0.02)AS(0.677)LDEYT(0.268)LMR 198.45 1.40E-15 55803900 5370.3 6289.03 6359.59 5607.34 6977.49 6824.52 8280.11 7006.14 6363.36 6733.57 TRUE FALSE 4913.527784 5879.613004 5927.91875 6039.218298 6699.561798 7210.918425 7727.75897 6944.886057 7024.854044 7567.775487 0.649269761 0.776927515 0.783310599 0.798017635 0.885274915 0.952845184 1.021140094 0.917691872 0.92825878 1 12.88565357 -5.931525239 0.753266206 0.971815803 0.677724084 0.868541833 0.040141309 0.318960215 0.346353276 0.022194222 0.061408441 1.17E-06 5.931525239 -0.294091719 QRPVPQPSSAS(ph)LDEYTLMR ddPTM_A459_MK2206_30min_R2 2 QRPVPQPSSASLDEYTLMR 19 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 QRPVPQPSSAS(0.844)LDEY(0.003)T(0.152)LMR;QRPVPQPS(0.093)S(0.093)AS(0.749)LDEY(0.038)T(0.026)LMR 145.71 0.00023561 35108700 47467 52363 63938 65562 47492 51175 66615 54599 67456 70582 TRUE FALSE 51101.11002 49762.72956 66069.66101 60205.37488 45627.22545 53122.50049 57868.37048 61735.27677 73323.20095 68278.91512 0.748417135 0.728815469 0.967643685 0.881756466 0.668247663 0.778022035 0.847529144 0.904163118 1.07387765 1 16.05915252 -7.962433457 2.208424568 1.035864065 0.800704265 0.570173059 0.081004367 0.255034106 2.332661253 0.069404952 0.024366355 1.09E-08 7.962433457 -0.2351598 QRPVPQPSSASLDEY(ph)TLMR ddPTM_A459_MK2206_30min_R2 1 QRPVPQPSSASLDEYTLMR 19 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 QRPVPQPS(0.043)S(0.043)AS(0.344)LDEY(0.438)T(0.131)LMR 131.06 0.0015722 4967700 8107.6 10615 6502.1 11460 11344 8396.4 12603 9849.4 9366 12475 TRUE FALSE 8728.32409 10087.87454 6718.876769 10523.68134 10898.57756 8715.930886 10948.21096 11136.7504 10180.63775 12067.94177 0.723265347 0.835923368 0.556754159 0.872036138 0.903101603 0.722238394 0.907214434 0.922837598 0.843610115 1 13.55889202 -7.094144913 0.249353587 1.017392596 0.659127834 0.40654773 0.093864728 3.021799951 0.513645343 0.200860909 0.379195123 8.05E-08 7.094144913 -0.358264762 QRS(ph)APDLK ddPTM_A459_MK2206_30min_R1 1 QRSAPDLK 8 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 QRS(1)APDLK 75.416 0.032048 6120800 2987.3 3047.9 2806.3 2474.9 2722.6 2519.2 2669.6 2599.9 1678.2 1523.2 TRUE FALSE 2733.214448 2849.481156 2615.816175 2665.517227 2614.153077 2661.834927 2491.515855 2577.169348 1852.654895 1711.905516 1.596591882 1.664508426 1.528014339 1.55704693 1.52704285 1.554895935 1.455405005 1.505439012 1.08221796 1 10.74138736 -8.28152497 2.638888095 0.991444243 1.555979358 0.942040474 0.050658419 0.062537757 0.804177283 0.051170586 0.014554934 5.23E-09 8.28152497 0.564535115 QRS(ph)DDESPSTSSGSSDADQR ddPTM_A459_MK2206_30min_R1 1 QRSDDESPSTSSGSSDADQR 20 1 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 1 QRS(0.999)DDESPSTSSGSSDADQR 87.554 0.015649 0 162.47 0 209.29 141.23 169.95 63.452 142.59 179.52 121.63 64.035 TRUE FALSE 148.6510733 0 195.0839779 152.1075591 163.1805316 67.04459741 133.0780813 177.9504756 134.2738738 71.96813924 2.065512252 0 2.710699206 2.113540251 2.267399621 0.931587201 1.849124942 2.472628547 1.865740523 1 6.169286452 -5.271712176 24.99950711 1.93808716 1.032756043 0.191176244 0.711425598 934.0566083 2273089.122 0.179143915 0.379630688 5.35E-06 5.271712176 -0.905331117 QRS(ph)DDESPSTSSGSSDADQRDPAAPEPEEQEER ddPTM_A459_MK2206_30min_R2 1 QRSDDESPSTSSGSSDADQRDPAAPEPEEQEER 33 2 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 1 QRS(0.981)DDES(0.016)PS(0.001)T(0.001)SSGSSDADQRDPAAPEPEEQEER 59.011 0.00031151 30924000 3471.8 3511.2 2269.2 8077.6 7042.2 8861.5 9998.6 6572.2 7538.5 2846.4 TRUE FALSE 3737.603677 3336.838914 2344.853995 7417.634241 6765.687844 9198.730592 8685.77181 7431.209106 8194.185104 2753.522201 1.357390064 1.211843839 0.851583472 2.693871231 2.457103066 3.340714155 3.154422291 2.698801231 2.97589215 1 11.42706253 -5.768949602 24.8609215 2.733894147 1.147429545 0.539737006 0.618484522 102.5812173 339573.2921 0.164630809 0.249689862 1.70E-06 5.768949602 -1.586464602 QRS(ph)PAPGS(ph)PDEEGGAEAPAAGIR ddPTM_A459_MK2206_30min_R2 2 QRSPAPGSPDEEGGAEAPAAGIR 23 1 O15061;A0A075B7B1;O15061-2;H0YL34 O15061 SYNM Synemin 2 QRS(1)PAPGS(1)PDEEGGAEAPAAGIR;QRS(1)PAPGS(1)PDEEGGAEAPAAGIR 118.41 2.11E-05 31143000 42640 47787 49202 65260 60801 66899 54665 48077 51845 43428 TRUE FALSE 45904.55118 45413.96707 50842.37012 59928.04924 58413.64724 69444.88832 47487.41984 54360.82897 56354.38439 42010.94792 1.092680681 1.081003151 1.210217161 1.426486481 1.390438686 1.653018838 1.130358209 1.29396816 1.341421396 1 15.35847772 -5.508629129 3.915509617 1.340446425 1.092773747 0.2349327 0.164538135 0.281447159 9.623147373 0.044602039 0.091252219 3.10E-06 5.508629129 -0.247672678 QRS(ph)PAPGSPDEEGGAEAPAAGIR ddPTM_A459_MK2206_30min_R1 3 QRSPAPGSPDEEGGAEAPAAGIR 23 1 O15061;A0A075B7B1;O15061-2;H0YL34 O15061 SYNM Synemin 1 QRS(1)PAPGSPDEEGGAEAPAAGIR;QRS(0.845)PAPGS(0.155)PDEEGGAEAPAAGIR;QRS(1)PAPGSPDEEGGAEAPAAGIR 169.62 1.31E-12 51927600 3748.93 3695.55 3728.22 3626.43 4230.67 3906.98 4543.49 3589.83 2804.18 2539.67 TRUE FALSE 3430.063817 3454.969023 3475.158814 3905.738267 4062.153455 4128.189831 4240.402072 3558.444495 3095.684546 2854.303493 1.201716575 1.210442068 1.217515524 1.368368247 1.423168022 1.446303745 1.485617098 1.24669451 1.08456741 1 11.47892303 -8.249977723 2.817583865 1.014763673 1.336610712 0.590302296 0.096962358 0.21263809 3.128883637 0.101931233 0.029546172 5.62E-09 8.249977723 0.321847039 QRS(ph)PAPGSPDEEGGAEAPAAGIR ddPTM_A459_MK2206_30min_R2 2 QRSPAPGSPDEEGGAEAPAAGIR 23 1 O15061;A0A075B7B1;O15061-2;H0YL34 O15061 SYNM Synemin 1 QRS(1)PAPGSPDEEGGAEAPAAGIR;QRS(1)PAPGSPDEEGGAEAPAAGIR 165.79 2.18E-12 43925000 40047 60262 50896 66003 56385 51704 57653 49663 59056 61506 TRUE FALSE 43113.02911 57269.47671 52592.84724 60610.34377 54171.04159 53671.63195 50083.09185 56154.12462 64192.58413 59499.06426 0.72460012 0.962527351 0.8839273 1.01867726 0.910451992 0.902058421 0.841745874 0.943781643 1.078883928 1 15.86057936 -4.758051775 24.98455223 0.941462627 0.724599815 0.501954624 0.066701231 84.56528581 623593.3332 0.016731099 0.118349947 1.75E-05 4.758051775 -0.216862812 QRS(ph)PIALPVK ddPTM_A459_MK2206_30min_R1 1 QRSPIALPVK 10 1 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 QRS(1)PIALPVK 75.102 0.033431 40245000 8331.3 8507.8 9228.1 7176.4 8121.2 8620.3 10296 8047 9239.1 8670.2 TRUE FALSE 7622.679186 7953.940674 8601.722283 7729.127571 7797.715407 9108.373936 9609.172626 7976.645927 10199.53751 9744.329833 0.782268182 0.81626349 0.88274129 0.793192318 0.800231062 0.934735799 0.986129656 0.818593589 1.046715134 1 13.25034725 -6.800338285 6.445653836 0.948656364 0.8175289 0.575448692 0.06090535 0.149555553 16.57319403 0.020692568 0.018524555 1.58E-07 6.800338285 -0.131127465 QRS(ph)PIALPVK ddPTM_A459_MK2206_30min_R2 3 QRSPIALPVK 10 1 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 QRS(1)PIALPVK;QRS(1)PIALPVK;QRS(1)PIALPVK 100.02 0.0098274 93267000 396162 434643 396700 419201 418317 389455 455793 331986 323681 350013 TRUE FALSE 426492.4673 413059.2607 409925.78 384950.9373 401891.7727 404275.9829 395946.8316 375377.7101 351834.1883 338592.1045 1.259605471 1.219931756 1.210677315 1.136916462 1.186949629 1.19399117 1.169391803 1.108642833 1.039109252 1 18.36918881 -8.064939032 1.089750362 0.996422013 1.202699761 0.867245443 0.028428296 0.180295677 0.400313804 0.028698709 0.010070896 8.61E-09 8.064939032 0.206277748 QRS(ph)PIALPVKQEPPQIDAVK ddPTM_A459_MK2206_30min_R1 2 QRSPIALPVKQEPPQIDAVK 20 2 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 QRS(1)PIALPVKQEPPQIDAVK;QRS(1)PIALPVKQEPPQIDAVK 94.387 0.00043725 26965000 5722.1 6026.4 6929 6914.2 7059.7 5677.5 5263.4 7190.6 3749.4 2083.96 TRUE FALSE 5235.405347 5634.080265 6458.678785 7446.732882 6778.4972 5998.955144 4912.28819 7127.733342 4139.163547 2342.136698 2.235311607 2.405530074 2.757601122 3.179461254 2.894150972 2.561317257 2.097353324 3.043261031 1.767259593 1 11.19360957 -8.504397713 4.030788366 1.003395268 2.643568551 0.727193273 0.326106383 0.096688313 4.192054623 0.332695905 0.087203973 3.13E-09 8.504397713 1.640173283 QRS(ph)PIALPVKQEPPQIDAVK ddPTM_A459_MK2206_30min_R2 2 QRSPIALPVKQEPPQIDAVK 20 2 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 QRS(1)PIALPVKQEPPQIDAVK;QRS(1)PIALPVKQEPPQIDAVK 102.57 0.00024776 25247000 56553 135888 108369 112097 152916 132141 131481 84528 142916 99701 TRUE FALSE 60882.74116 129139.9995 111981.9684 102938.3165 146911.7495 137169.7184 114217.3868 95576.09983 155346.5753 96447.76454 0.631250931 1.338963118 1.161063389 1.067296033 1.523226072 1.422217705 1.184240893 0.990962313 1.610680933 1 16.55746018 -4.756895361 24.95240303 1.257654949 0.631249968 0.45653757 0.204282764 122.5638997 672945.6223 0.049688772 0.386618696 1.75E-05 4.756895361 -0.626404981 QRS(ph)PLLNQPVPELSHASLIANQSPFR ddPTM_A459_MK2206_30min_R1 1 QRSPLLNQPVPELSHASLIANQSPFR 26 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 QRS(1)PLLNQPVPELSHASLIANQSPFR 87.05 3.18E-05 13954000 1454.8 1012.5 1184.6 1073.2 1934.5 2063.8 1945.9 1376.1 962.48 688.79 TRUE FALSE 1331.061621 946.586066 1104.192652 1155.85805 1857.444769 2180.650572 1816.092561 1364.068903 1062.53324 774.1225053 1.71944571 1.222785876 1.426379733 1.493120329 2.399419673 2.816932149 2.346001504 1.762084029 1.372564721 1 9.596418081 -6.156556763 7.225134443 2.049861386 1.438900599 0.163192949 0.506825719 0.409394995 24.82438853 0.156579134 0.202836944 6.97E-07 6.156556763 -0.610960787 QRS(ph)PLLNQPVPELSHASLIANQSPFR ddPTM_A459_MK2206_30min_R2 2 QRSPLLNQPVPELSHASLIANQSPFR 26 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 QRS(1)PLLNQPVPELSHASLIANQSPFR;QRS(1)PLLNQPVPELSHASLIANQSPFR 94.955 1.88E-06 10471000 3651.2 13504.4 10876.8 17260.7 19459.3 33922 17721.1 12302.1 24230 9953.8 TRUE FALSE 3930.738679 12833.79113 11239.42708 15850.4456 18695.23011 35212.92548 15394.29828 13910.02671 26337.4816 9629.008321 0.408218432 1.332825843 1.167246585 1.64611402 1.941553012 3.656962826 1.598741819 1.44459598 2.735222644 1 13.23317151 -5.757659651 1.551865911 2.130546517 0.845510034 0.321338314 0.718888572 0.484043031 2.356557612 0.236175006 0.531929164 1.75E-06 5.757659651 -1.285036483 QRTS(ph)GSGFHR ddPTM_A459_MK2206_30min_R2 1 QRTSGSGFHR 10 1 Q15007 Q15007 WTAP Pre-mRNA-splicing regulator WTAP 1 QRT(0.122)S(0.843)GS(0.035)GFHR 81.676 0.024477 2432400 1333.1 6140.8 4300 6493.2 7348.7 6551.9 5249.2 4696.9 4944.7 5891.7 TRUE FALSE 1435.163161 5835.856802 4443.359854 5962.684789 7060.153114 6801.237146 4559.973735 5310.800957 5374.781068 5699.454312 0.251807117 1.023932553 0.779611452 1.046185207 1.238741944 1.193313741 0.800071987 0.931808673 0.943034328 1 12.47660808 -4.760116005 24.99632254 0.995619812 0.251806217 0.720115163 0.139034031 19.42524179 366770.8016 0.037752491 0.228855745 1.74E-05 4.760116005 -0.743813595 QRY(ph)GAS(ph)LLHTYAGPS(ph)LLVLGPRGAPAVY(ph)S(ph)EK ddPTM_A459_MK2206_30min_R2 1 QRYGASLLHTYAGPSLLVLGPRGAPAVYSEK 31 2 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;H0YEV9 Q92614 MYO18A Unconventional myosin-XVIIIa 5 QRY(0.876)GAS(0.876)LLHT(0.227)Y(0.191)AGPS(0.846)LLVLGPRGAPAVY(0.992)S(0.992)EK 44.301 0.0091451 3425000 21053 15936 16841 10314 9149.1 4654.2 12347 9824.8 6186.6 8560.6 TRUE FALSE 22664.83387 15144.64141 17402.47053 9471.313207 8789.860363 4831.318842 10725.82407 11108.93509 6724.699285 8281.268323 2.736879543 1.828782841 2.101425755 1.143703215 1.061414752 0.583403249 1.295190984 1.341453345 0.812037362 1 13.01563603 -5.555121804 1.329581568 1.008626674 2.46952138 0.781341943 0.289368471 0.239041112 0.78190538 0.09505352 0.321362008 2.79E-06 5.555121804 1.460894706 up QS(ph)AGPNSPTGGGGGGGSGGTR ddPTM_A459_MK2206_30min_R1 1 QSAGPNSPTGGGGGGGSGGTR 21 0 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 QS(0.917)AGPNS(0.077)PT(0.006)GGGGGGGSGGTR 116.73 7.63E-05 803320 148.52 243.14 239 132.9 265.57 277.75 366.79 123.74 155.98 394.93 TRUE FALSE 135.8875941 227.3115418 222.7773459 143.135981 254.9917845 293.475965 342.3221083 122.6581542 172.1946792 443.85691 0.306151805 0.512127978 0.501912533 0.322482264 0.574490965 0.66119499 0.771244292 0.276346164 0.387950881 1 8.793950847 -6.366506682 7.843458167 0.587083511 0.424719638 0.194486351 0.19603208 0.618183311 41.22773673 0.06178816 0.070058186 4.30E-07 6.366506682 -0.162363874 QS(ph)GDGQESTEPVENK ddPTM_A459_MK2206_30min_R1 1 QSGDGQESTEPVENK 15 0 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 QS(0.992)GDGQES(0.008)T(0.001)EPVENK 236.68 6.71E-20 10664000 2406.4 2522.5 2493.6 1864.2 1763.6 1712.3 2603.8 1839.9 2536.5 3104.5 TRUE FALSE 2201.723043 2358.284792 2324.34138 2007.781007 1693.352078 1809.248946 2430.105253 1823.813948 2800.178252 3489.108898 0.631027322 0.675898879 0.666170489 0.575442345 0.485325086 0.51854184 0.696483063 0.522716258 0.802548253 1 11.76864291 -8.513815652 3.630099164 0.999181331 0.598519583 0.778672264 0.068955428 0.093934826 3.265506734 0.071166025 0.018749481 3.06E-09 8.513815652 -0.400661747 QS(ph)GDGQESTEPVENK ddPTM_A459_MK2206_30min_R2 2 QSGDGQESTEPVENK 15 0 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 QS(1)GDGQESTEPVENK;QS(0.576)GDGQES(0.118)T(0.306)EPVENK 225.17 3.26E-10 33201300 68695 45338 59225 52390 46981 37509 64514 49879 37165 63001 TRUE FALSE 73954.34202 43086.58085 61199.53194 48109.56941 45136.28988 38936.43128 56043.2343 56398.35656 40397.54452 60945.28253 1.213454741 0.70697155 1.004171765 0.789389554 0.740603505 0.638875228 0.919566404 0.925393307 0.662849409 1 15.89522693 -4.751363645 24.92322605 0.818170687 1.21345558 0.456726827 0.128420391 366.0616717 905422.0665 0.031228367 0.415336605 1.77E-05 4.751363645 0.395284893 QS(ph)PASPPPLGGGAPVR ddPTM_A459_MK2206_30min_R1 1 QSPASPPPLGGGAPVR 16 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 QS(0.777)PAS(0.223)PPPLGGGAPVR 104.78 0.0037824 20244000 1329.4 1324.1 1159.2 1277.8 1295.1 1314.5 1618 1328.4 1277.1 1342.5 TRUE FALSE 1216.327549 1237.900849 1080.516734 1376.216377 1243.513425 1388.925854 1510.066172 1316.785939 1409.859115 1508.819035 0.806145416 0.820443552 0.716134081 0.912114936 0.824163399 0.920538396 1.000826565 0.872726224 0.934412333 1 10.55920407 -6.447357881 1.123252276 0.945193473 0.791318871 0.586077454 0.055214706 0.359518515 0.955114828 0.025027082 0.030876288 3.57E-07 6.447357881 -0.153874602 QS(ph)PASPPPLGGGAPVR ddPTM_A459_MK2206_30min_R2 2 QSPASPPPLGGGAPVR 16 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 QS(0.73)PAS(0.27)PPPLGGGAPVR;QS(0.989)PAS(0.011)PPPLGGGAPVR 167.18 1.52E-05 123413000 89961 85943 85999 86992 83208 95736 123048 67125 98847 104555 TRUE FALSE 96848.48333 81675.19559 88866.16374 79884.47533 79940.83583 99379.30057 106891.6498 75898.46797 107444.5334 101143.3789 0.957536562 0.807518954 0.87861573 0.789814184 0.790371418 0.982558637 1.056832893 0.750404711 1.062299228 1 16.62604236 -6.770047343 24.99966358 0.960220267 0.841528854 0.308609823 0.09334855 252.0967311 732147.263 0.03188188 0.028551983 1.70E-07 6.770047343 -0.118691413 QS(ph)PCHSPR ddPTM_A459_MK2206_30min_R2 1 QSPCHSPR 8 0 H3BRS1;Q12968;I3L3K7;H3BR83;Q12968-5;Q12968-6;Q12968-4;Q12968-3;Q12968-2 H3BRS1 NFATC3 "Nuclear factor of activated T-cells, cytoplasmic 3" 1 QS(0.964)PCHS(0.036)PR 88.134 0.031496 548120 2280.6 825.64 412.89 1149.7 2048.6 471.15 3042.2 3987 2668 2253.9 TRUE FALSE 2455.204489 784.6399182 426.6555465 1055.765832 1968.161671 489.0799434 2642.755486 4508.114589 2900.057817 2180.355428 1.126056999 0.359867895 0.195681649 0.484217306 0.902679281 0.224312026 1.212075542 2.067605369 1.330084894 1 11.09034762 -7.448197636 5.170951521 1.546806905 0.542550263 0.567072715 0.367703567 0.141544661 6.859310532 0.155957025 0.101785545 3.56E-08 7.448197636 -1.004256643 QS(ph)PDHPTVGAGVLHITENGPTEVDYS(ph)PSDMQDSSLSHK ddPTM_A459_MK2206_30min_R2 1 QSPDHPTVGAGVLHITENGPTEVDYSPSDMQDSSLSHK 38 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 QS(0.673)PDHPT(0.316)VGAGVLHIT(0.014)ENGPT(0.021)EVDY(0.384)S(0.426)PS(0.164)DMQDS(0.001)SLSHK 51.715 0.0071532 4111000 4222.3 8310.5 5681.3 7783.3 9630.6 5993 7232.2 5792.1 5776.7 7630.7 TRUE FALSE 4545.562534 7897.812655 5870.711706 7147.379492 9252.454254 6221.067814 6282.603453 6549.147357 6279.146924 7381.710884 0.615787127 1.069916281 0.795305018 0.968255138 1.25342951 0.842767742 0.851103972 0.887212661 0.850635716 1 12.84973952 -4.747017509 24.85861584 0.942310998 0.615786222 0.368597886 0.129752658 836.4265875 1441639.942 0.033205192 0.704889213 1.79E-05 4.747017509 -0.326524775 QS(ph)PDHPTVGAGVLHITENGPTEVDYSPSDMQDSSLSHK ddPTM_A459_MK2206_30min_R1 1 QSPDHPTVGAGVLHITENGPTEVDYSPSDMQDSSLSHK 38 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QS(0.497)PDHPT(0.497)VGAGVLHIT(0.003)ENGPT(0.003)EVDYSPSDMQDSSLSHK 72.726 3.09E-06 8849900 431.46 377.25 338.23 173.12 445.06 438.19 362.74 373.13 286.11 298.39 TRUE FALSE 394.7620613 352.6909564 315.27189 186.4537324 427.3323178 462.9999391 338.5422765 369.8677637 315.8521584 335.3568059 1.17714045 1.05168868 0.940108817 0.555986129 1.274261653 1.380618884 1.00949875 1.102908178 0.941839118 1 8.389553071 -4.778719792 4.68520909 1.031384956 1.185917352 0.044766027 0.207352306 0.750318446 38.02762618 0.055770966 0.37404241 1.66E-05 4.778719792 0.154532396 QS(ph)PDHPTVGAGVLHITENGPTEVDYSPSDMQDSSLSHK ddPTM_A459_MK2206_30min_R2 4 QSPDHPTVGAGVLHITENGPTEVDYSPSDMQDSSLSHK 38 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QS(0.917)PDHPT(0.081)VGAGVLHIT(0.001)ENGPT(0.001)EVDYSPSDMQDSSLSHK;QS(0.792)PDHPT(0.207)VGAGVLHITENGPTEVDYSPSDMQDSSLSHK;QS(0.778)PDHPT(0.218)VGAGVLHIT(0.003)ENGPTEVDYSPSDMQDSSLSHK;QS(0.587)PDHPT(0.199)VGAGVLHIT(0.168)ENGPT(0.042)EVDY(0.004)SPSDMQDSSLSHK 90.559 3.52E-10 213226200 91933.1 212045.1 140123.4 275415.1 273602.6 302254.1 305841.9 188735.1 235426.4 198031.2 TRUE FALSE 98971.56882 201515.2487 144795.0442 252912.8053 262859.5872 313756.5916 265684.4911 213403.4256 255903.3627 191569.4582 0.516635427 1.051917412 0.755835745 1.320214651 1.372137238 1.637821574 1.386883346 1.113974157 1.335825476 1 17.54750805 -5.765433244 24.77566427 1.333807812 0.802508249 0.595970625 0.200688916 60.35522898 374413.5057 0.055994773 0.086642813 1.72E-06 5.765433244 -0.531299562 QS(ph)PECENFLDVGLGR ddPTM_A459_MK2206_30min_R1 2 QSPECENFLDVGLGR 15 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;H0YMW2;A0A087WY36;A0A087X047 Q12802-4 AKAP13 A-kinase anchor protein 13 1 QS(1)PECENFLDVGLGR;QS(1)PECENFLDVGLGR 144.17 0.0003744 16036800 2641.3 2359.56 2578.1 2067.1 2057.1 2073.14 2338.98 2283.3 2924.4 3244.2 TRUE FALSE 2416.643565 2205.952215 2403.105755 2226.3084 1975.161351 2190.519395 2182.950912 2263.337349 3228.401845 3646.115988 0.662799421 0.605014273 0.659086481 0.610597251 0.541716544 0.600781599 0.598705834 0.620752975 0.88543586 1 11.83214474 -8.366325144 2.869165742 0.996511545 0.608409342 0.944332962 0.032630468 0.054213433 0.832517799 0.032846942 0.008966709 4.30E-09 8.366325144 -0.388102203 QS(ph)PECENFLDVGLGR ddPTM_A459_MK2206_30min_R2 4 QSPECENFLDVGLGR 15 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;H0YMW2;A0A087WY36;A0A087X047 Q12802-4 AKAP13 A-kinase anchor protein 13 1 QS(1)PECENFLDVGLGR;QS(1)PECENFLDVGLGR;QS(1)PECENFLDVGLGR;QS(1)PECENFLDVGLGR 129.42 0.00088523 12148800 30848.8 26778.1 21946.1 28164 23770.7 28953.2 34824.1 21880.2 22511.4 31268.7 TRUE FALSE 33210.60785 25448.33849 22677.77202 25862.91111 22837.34288 30055.03431 30251.65384 24740.01727 24469.40088 30248.40488 1.097929229 0.841311752 0.749717947 0.855017354 0.754993295 0.993607248 1.000107409 0.817894939 0.808948471 1 14.88457144 -6.773222011 24.99799766 0.917479753 0.852386416 0.074930627 0.110261324 682.1574972 1447253.781 0.040306559 0.035833644 1.69E-07 6.773222011 -0.065093336 QS(ph)PGPALAR ddPTM_A459_MK2206_30min_R1 1 QSPGPALAR 9 0 P85037 P85037 FOXK1 Forkhead box protein K1 1 QS(1)PGPALAR 91.123 0.027636 47431000 5759.4 5651.1 5319.7 4915.2 6057.7 5468.6 5657.8 4817.2 4562.9 3947.3 TRUE FALSE 5269.532786 5283.212363 4958.613586 5293.769556 5816.408982 5778.227406 5280.378485 4775.083728 5037.229783 4436.321325 1.18781585 1.190899391 1.117730936 1.193279109 1.3110883 1.302481715 1.190260601 1.076361106 1.135451969 1 12.11514815 -7.709615888 4.465158567 1.078128882 1.216860224 0.533619733 0.061369771 0.188893137 7.803831419 0.035044139 0.018658514 1.95E-08 7.709615888 0.138731342 QS(ph)PGPALAR ddPTM_A459_MK2206_30min_R2 4 QSPGPALAR 9 0 P85037 P85037 FOXK1 Forkhead box protein K1 1 QS(1)PGPALAR;QS(1)PGPALAR;QS(1)PGPALAR;QS(1)PGPALAR 100.09 0.018229 195627000 338945 416425 364086 358441 378077 386575 397542 315454 372613 351407 TRUE FALSE 364894.8898 395745.94 376224.4455 329155.2237 363231.7973 401286.3825 345344.2579 356684.9209 405022.2052 339940.6184 1.073407737 1.16416197 1.10673578 0.96827271 1.068515434 1.180460236 1.015895834 1.049256551 1.191449869 1 18.37492323 -11.09283417 2.858427404 0.994785432 1.088463732 0.135754479 0.068561939 47153208.5 56136291.86 1909031.529 0.017344334 8.08E-12 11.09283417 0.093678299 QS(ph)PLTYEDHGAPFAGHLPR ddPTM_A459_MK2206_30min_R1 1 QSPLTYEDHGAPFAGHLPR 19 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 QS(0.909)PLT(0.09)Y(0.001)EDHGAPFAGHLPR 112.64 0.00029389 3470500 1022.9 1007.3 982.75 725.92 856.13 914.42 1139 847 991.05 846.22 TRUE FALSE 935.8969835 941.7245869 916.0436681 781.8304842 822.0285292 966.1936702 1063.019388 839.5947683 1094.073194 951.0561222 0.984060732 0.990188239 0.963185712 0.82206556 0.864332304 1.015916566 1.117725193 0.882802548 1.150377111 1 9.893386667 -6.890536134 7.260122708 1.033272908 0.925164196 0.30403165 0.082523245 0.307474458 18.61418092 0.029564305 0.026078466 1.29E-07 6.890536134 -0.108108712 QS(ph)PLTYEDHGAPFAGHLPR ddPTM_A459_MK2206_30min_R2 2 QSPLTYEDHGAPFAGHLPR 19 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 QS(0.963)PLT(0.035)Y(0.002)EDHGAPFAGHLPR;QS(0.856)PLT(0.127)Y(0.016)EDHGAPFAGHLPR 95.662 0.00088919 19198600 19059.7 24160 21970 27521 21577.2 21771.4 28063 23152 21301.7 22030.7 TRUE FALSE 20518.92529 22960.24953 22702.46883 25272.44626 20729.97071 22599.92588 24378.29439 26178.04589 23154.48336 21311.84006 0.962794636 1.077347121 1.065251464 1.18584065 0.972697367 1.060439916 1.14388501 1.228333444 1.086461014 1 14.37936754 -7.254753745 21.97618023 1.133697656 1.057920438 0.104639137 0.078917069 181.2932166 595927.882 0.030238819 0.02277744 5.56E-08 7.254753745 -0.075777218 QS(ph)PNSSSAAASVASR ddPTM_A459_MK2206_30min_R1 3 QSPNSSSAAASVASR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 QS(0.999)PNS(0.001)SSAAASVASR;QS(0.914)PNS(0.085)S(0.001)SAAASVASR;QS(0.686)PNS(0.296)S(0.012)S(0.006)AAASVASR 181.86 2.05E-05 43486400 3762.1 3352.61 3286.62 2306.2 2917.34 3197.65 4211.63 2860.8 3655.92 4348.62 TRUE FALSE 3442.113639 3134.35448 3063.533391 2483.823924 2801.13617 3378.69818 3930.679847 2835.788327 4035.965967 4887.359876 0.704288967 0.641318536 0.626827872 0.508213839 0.573138922 0.691313565 0.804254229 0.580229081 0.825796763 1 12.25483962 -8.830945466 0.592257354 1.010149161 0.617200346 0.664423146 0.080395544 0.829551304 0.587634714 0.09866068 0.037151775 1.48E-09 8.830945466 -0.392948815 QS(ph)PNSSSAAASVASR ddPTM_A459_MK2206_30min_R2 4 QSPNSSSAAASVASR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 QS(0.604)PNS(0.253)S(0.089)S(0.054)AAASVASR;QS(0.948)PNS(0.035)S(0.008)S(0.008)AAAS(0.001)VASR;QS(0.997)PNS(0.002)S(0.001)SAAASVASR;QS(0.932)PNS(0.038)S(0.012)S(0.017)AAASVASR 176.68 1.93E-05 96235000 40506.6 33051.7 31715.4 34699.3 27517.4 28890.5 37860.1 29660.1 24430.9 32770.9 TRUE FALSE 43607.81644 31410.40064 32772.77561 31864.25619 26436.92861 29989.94822 32889.02339 33536.77691 26555.85552 31701.58822 1.375571979 0.990814732 1.033789707 1.005131225 0.83393073 0.946007753 1.037456646 1.057889487 0.83768218 1 14.9522675 QS(ph)PPISTSK ddPTM_A459_MK2206_30min_R2 2 QSPPISTSK 9 0 P33981-2;P33981 P33981-2 TTK Dual specificity protein kinase TTK 1 QS(1)PPISTSK;QS(0.996)PPIS(0.002)T(0.002)SK 101.56 0.016919 29294000 274420 231820 219660 249550 230260 192022 292300 255560 193237 325860 TRUE FALSE 295429.8062 220308.1559 226983.3548 229160.9667 221218.8354 199329.5318 253920.6589 288962.5695 210044.405 315227.2149 0.937196385 0.698886852 0.720062685 0.726970756 0.701775814 0.63233605 0.805516297 0.916680273 0.666327002 1 18.26603257 -10.54777312 0.464058441 1.089351758 0.744397931 0.352119697 0.097347254 20.45691913 2.813469121 2.549538698 0.051857257 2.83E-11 10.54777312 -0.344953827 QS(ph)QGPSPR ddPTM_A459_MK2206_30min_R2 1 QSQGPSPR 8 0 H0Y4G4 H0Y4G4 DCBLD1 1 QS(0.994)QGPS(0.006)PR 82.505 0.041154 4537600 15204 6199.8 8964.4 10834 13576 10604 10760 36276 21408 12759 TRUE FALSE 16368.02993 5891.926947 9263.268622 9948.827544 13042.93803 11007.54265 9347.199075 41017.39775 23270.02914 12342.67487 1.326133119 0.477362242 0.750507383 0.806051172 1.056735121 0.891827968 0.757307405 3.323217874 1.885331128 1 13.59136747 -7.726940478 24.9996199 2.203206921 0.853086113 0.479975889 0.568595017 121.9657285 88382.42521 0.249320021 0.143936417 1.88E-08 7.726940478 -1.350120808 QS(ph)SPSGSEQLVR ddPTM_A459_MK2206_30min_R2 1 QSSPSGSEQLVR 12 0 O15231-3;O15231-2;H7BZT5;O15231-4;O15231-7;O15231;O15231-8;O15231-6;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 QS(0.651)S(0.325)PS(0.018)GS(0.006)EQLVR 86.262 0.038633 0 17583 24669 15811 15896 17629 18807 21832 15439 17952 19499 TRUE FALSE 18929.168 23443.97333 16338.13085 14597.24595 16936.79688 19522.71356 18965.43218 17456.93031 19513.43251 18862.74923 1.003521161 1.242871495 0.866158514 0.7738663 0.89789652 1.034987707 1.005443689 0.925471155 1.034495676 1 14.20325234 -5.27068173 24.99949447 0.937593715 1.123196333 0.367934755 0.094683965 623.90064 1687581.764 0.026035504 0.055387785 5.36E-06 5.27068173 0.185602618 QS(ph)SQDNELK ddPTM_A459_MK2206_30min_R2 1 QSSQDNELK 9 0 Q13427;E9PG73 Q13427 PPIG Peptidyl-prolyl cis-trans isomerase G 1 QS(0.707)S(0.293)QDNELK 121.68 0.0061852 5762900 37770 39143 31689 28405 36354 25396 35855 33634 30220 34075 TRUE FALSE 40661.70024 37199.21554 32745.49544 26084.22064 34926.5593 26362.46258 31147.19543 38030.07928 32848.48097 32963.13554 1.23355074 1.128509619 0.99339747 0.79131491 1.059564229 0.799755913 0.94490997 1.153715466 0.996521734 1 15.00856586 -5.120008114 2.691124579 0.962124134 1.222902164 0.426182801 0.102739268 0.290753803 3.849311795 0.028509507 0.117657827 7.59E-06 5.120008114 0.26077803 QS(ph)STDSSGGHPGPR ddPTM_A459_MK2206_30min_R1 1 QSSTDSSGGHPGPR 14 0 Q9GZV5;C9JR84;C9J038;C9JQS8 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 1 QS(0.332)S(0.332)T(0.332)DS(0.004)SGGHPGPR 102.84 0.0048333 828550 237.93 184.24 124.1 329.47 286.61 246.57 315.42 286.96 57.4 177.32 TRUE FALSE 217.6928041 172.2459425 115.6764378 354.8458365 275.1937168 260.5305803 294.3789073 284.451139 63.36693541 199.2877403 1.09235422 0.864307771 0.580449342 1.780570325 1.380886332 1.307308618 1.477155127 1.427338875 0.317967053 1 7.638709152 -5.740060889 24.99845854 1.277765557 0.84756431 0.180134581 0.381623953 387.3517986 452937.6267 0.103347398 0.178784818 1.82E-06 5.740060889 -0.430201247 QS(ph)STDSSGGHPGPR ddPTM_A459_MK2206_30min_R2 2 QSSTDSSGGHPGPR 14 0 Q9GZV5;C9JR84;C9J038;C9JQS8 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 1 QS(0.43)S(0.43)T(0.137)DS(0.003)SGGHPGPR;QS(0.648)S(0.176)T(0.176)DSSGGHPGPR 132.9 0.00050967 9275300 7664.3 10484.3 6990 11723.2 13223.8 12390.8 10381.1 10047.8 13932.2 10497.4 TRUE FALSE 8251.084701 9963.664908 7223.043111 10765.37706 12704.56717 12862.34058 9018.0491 11361.08196 15143.99757 10154.8707 0.812524841 0.981171027 0.711288536 1.06011956 1.251081136 1.266617859 0.888051593 1.118781548 1.491303831 1 13.30988425 -5.948826869 5.986659151 1.165436454 0.85163509 0.452955347 0.16386798 0.187579142 14.93503344 0.04698389 0.069896312 1.13E-06 5.948826869 -0.313801365 QS(ph)STPSAPELGQQPDVNISEWK ddPTM_A459_MK2206_30min_R2 2 QSSTPSAPELGQQPDVNISEWK 22 0 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 QS(0.668)S(0.237)T(0.085)PS(0.011)APELGQQPDVNISEWK;QS(0.677)S(0.233)T(0.081)PS(0.01)APELGQQPDVNISEWK 150.06 1.68E-07 7874500 28838 35150 32180 38072 36686 30312 34199 26735 28656 35181 TRUE FALSE 31045.85945 33404.50211 33252.86514 34961.39581 35245.52331 31465.5444 29708.63022 30229.35629 31148.44708 34033.04685 0.91222686 0.981531341 0.977075761 1.027277868 1.035626445 0.924558549 0.872934779 0.88823538 0.915241213 1 15.0546487 -6.916339756 7.372208474 0.908258882 0.987933447 0.348461273 0.044539035 0.228787131 17.12910817 0.015918076 0.01403149 1.21E-07 6.916339756 0.079674565 QSAGPNS(ph)PTGGGGGGGSGGTR ddPTM_A459_MK2206_30min_R1 2 QSAGPNSPTGGGGGGGSGGTR 21 0 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 QSAGPNS(0.704)PT(0.296)GGGGGGGSGGTR;QSAGPNS(0.714)PT(0.286)GGGGGGGSGGTR 287.43 1.54E-86 6535900 642.12 719.84 705.14 616.29 638.24 696.88 741.94 470.21 622.46 658.82 TRUE FALSE 587.5043221 672.9782852 657.2770614 663.7567626 612.8175493 736.3367434 692.4465363 466.0990035 687.1669445 740.4395954 0.79345341 0.908890191 0.887684918 0.896436072 0.827640165 0.994458897 0.935183019 0.629489571 0.928052671 1 9.532238236 -8.524725543 24.9977781 1.000000021 0.86336076 0.187312931 0.093253665 320.6958269 4340878.086 0.090807923 0.023446505 2.99E-09 8.524725543 -0.136639261 QSAGPNS(ph)PTGGGGGGGSGGTR ddPTM_A459_MK2206_30min_R2 3 QSAGPNSPTGGGGGGGSGGTR 21 0 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 QS(0.012)AGPNS(0.863)PT(0.125)GGGGGGGSGGTR;QS(0.001)AGPNS(0.709)PT(0.291)GGGGGGGSGGTR;QS(0.001)AGPNS(0.706)PT(0.293)GGGGGGGSGGTR 273.01 3.45E-60 14426300 15112.7 16918.6 16380.57 18726.3 18876.4 17643.4 18035.1 15572.6 15251.5 16016.1 TRUE FALSE 16269.73993 16078.44693 16926.69003 17196.30139 18135.21769 18314.83195 15667.06971 17607.99229 16578.0479 15493.49597 1.050101279 1.037754614 1.092502948 1.109904532 1.170505206 1.182098087 1.011203007 1.136476385 1.070000466 1 13.91937509 -5.35631957 3.89591871 1.105585465 1.043677788 0.10770673 0.056991106 0.420913935 11.48674441 0.015144416 0.034862185 4.40E-06 5.35631957 -0.061907677 QSAGPNSPT(ph)GGGGGGGSGGTR ddPTM_A459_MK2206_30min_R2 1 QSAGPNSPTGGGGGGGSGGTR 21 0 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 QSAGPNS(0.174)PT(0.796)GGGGGGGS(0.022)GGT(0.007)R 95.361 0.00097958 2167400 4564.5 4091.5 4649.2 3816.7 4795.6 4996.1 4998.5 3994.7 4347.7 4256.5 TRUE FALSE 4913.96163 3888.32206 4804.202008 3504.863401 4607.300648 5186.230086 4342.190946 4516.821006 4725.855087 4117.610754 1.193401204 0.944315112 1.16674506 0.851188617 1.118925737 1.259524126 1.054541385 1.096951916 1.147717783 1 12.00759174 -6.468250144 24.99971081 1.122564679 1.034257793 0.091618308 0.111435794 643.4050989 294441.3691 0.032939814 0.037350006 3.40E-07 6.468250144 -0.088306887 QSDEVGDRDHR ddPTM_A459_MK2206_30min_R1 1 QSDEVGDRDHR 11 1 P40222 P40222 TXLNA Alpha-taxilin 0 117.14 0.016023 822780 938.7 757.66 636.99 908.76 337.17 785.86 1120.7 1153.8 132.95 427.78 FALSE TRUE 858.8586357 708.3361963 593.7528936 978.7528527 323.7398049 830.3547141 1045.940148 1143.712448 146.7706283 480.776616 1.786398521 1.473316656 1.234987048 2.035774662 0.67336845 1.727111275 2.175522089 2.37888535 0.305278217 1 8.909222918 -8.274930612 24.99903574 0.652639037 1.659205758 0.417459148 0.487321849 920.0353679 1704793.064 0.471720478 0.124553179 5.31E-09 8.274930612 1.006566721 QSEKPHS(ph)TPPQSCTSDLSK ddPTM_A459_MK2206_30min_R2 1 QSEKPHSTPPQSCTSDLSK 19 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 QSEKPHS(0.48)T(0.48)PPQS(0.034)CT(0.003)S(0.001)DLSK 68.625 0.010384 5461900 9292.6 16227 10944 14194 15543 15408 15321 10207 15165 12342 TRUE FALSE 10004.0486 15421.19078 11308.8675 13034.3048 14932.70372 15994.36224 13309.3343 11541.08995 16484.02429 11939.28155 0.837910435 1.291634736 0.947198326 1.091716008 1.250720461 1.339641935 1.114751691 0.966648613 1.380654625 1 13.5434284 -4.744734643 24.89126208 1.151861747 0.837909468 0.288550853 0.148716115 1286.748139 1917238.898 0.036460723 1.003489616 1.80E-05 4.744734643 -0.313952279 QSEKPHSTPPQS(ph)CTSDLSK ddPTM_A459_MK2206_30min_R2 1 QSEKPHSTPPQSCTSDLSK 19 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 QS(0.005)EKPHS(0.142)T(0.142)PPQS(0.571)CT(0.12)S(0.021)DLSK 60.564 0.016584 12343000 51695 88748 85109 105430 115380 99668 120890 86879 94655 94389 TRUE FALSE 55652.80895 84340.90337 87946.49158 96816.03175 110849.6015 103460.9356 105016.9978 98234.3836 102887.9208 91309.09466 0.609499077 0.923685682 0.963173405 1.060310937 1.214003949 1.133084672 1.150126372 1.07584446 1.126809122 1 16.47847094 -4.408901403 0.908671822 1.120640347 1.47E-10 0.862483818 0.060322298 1.298287372 0.531429225 0.020643365 1.691836988 3.90E-05 4.408901403 -1.120640347 QSELSAEES(ph)PEKLGTSQLHR ddPTM_A459_MK2206_30min_R1 4 QSELSAEESPEKLGTSQLHR 20 1 F8W9X7;Q567U6 F8W9X7 CCDC93 Coiled-coil domain-containing protein 93 1 QSELS(0.005)AEES(0.995)PEKLGTSQLHR;QSELS(0.008)AEES(0.967)PEKLGT(0.012)S(0.012)QLHR;QS(0.002)ELS(0.065)AEES(0.931)PEKLGT(0.002)S(0.001)QLHR;QSELS(0.004)AEES(0.942)PEKLGT(0.037)S(0.016)QLHR 70.02 0.0049007 44456100 11790.6 9151.68 10403.81 9274.08 9566 8260.22 9564.86 9675 7216 7388.61 TRUE FALSE 10787.74756 8555.903969 9697.628364 9988.371249 9184.965964 8727.906518 8926.805641 9590.412495 7966.129023 8303.966788 1.299107743 1.030339377 1.167830822 1.202843352 1.106093774 1.051052677 1.075004979 1.154919419 0.959316099 1 13.01958496 -1.522878745 0.114325959 0.939539306 1.752689266 0.420183055 0.074344034 111.9297478 0.89084621 0.597789503 14.4072861 0.03 1.522878745 0.81314996 QSFCLS(ph)PNSVDHR ddPTM_A459_MK2206_30min_R2 1 QSFCLSPNSVDHR 13 0 E9PPG5;E9PL28;P15622-2;P15622-3;P15622 E9PPG5 ZNF250 Zinc finger protein 250 1 QSFCLS(0.895)PNS(0.105)VDHR 80.975 0.023806 2239700 13599 22045 18141 24195 21130 27643 18714 16607 19423 17943 TRUE FALSE 14640.1499 20950.27736 18745.81189 22218.1911 20300.33003 28694.97374 16256.82932 18777.59192 21112.37743 17357.52138 0.843447032 1.206985542 1.079982071 1.280032478 1.169540834 1.653172311 0.936587026 1.08181298 1.216324438 1 14.08327333 -4.759706647 24.85207598 1.189826292 0.843446567 0.225664669 0.186582842 63.33674697 908130.969 0.04608464 0.287105565 1.74E-05 4.759706647 -0.346379725 QSFDDNDS(ph)EELEDK ddPTM_A459_MK2206_30min_R2 4 QSFDDNDSEELEDK 14 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 QSFDDNDS(1)EELEDK;QSFDDNDS(1)EELEDK;QSFDDNDS(1)EELEDK;QSFDDNDS(1)EELEDK 229.69 9.03E-52 15124900 178339 100787 114114.4 92825 94979 73463.9 128524 96873.9 76459.9 153751 TRUE FALSE 191992.771 95782.06414 117918.9171 85240.90057 91249.64723 76259.62019 111648.6444 109535.6513 83110.24389 148734.1175 1.290845532 0.643981796 0.792816868 0.573109264 0.613508513 0.512724461 0.750659273 0.73645276 0.558783992 1 17.18237609 -4.759825856 24.99938263 0.672668152 1.290846295 0.638892011 0.135837884 24.41997954 378236.0575 0.031799051 0.196578514 1.74E-05 4.759825856 0.618178143 QSFDDNDS(ph)EELEDKDSK ddPTM_A459_MK2206_30min_R1 6 QSFDDNDSEELEDKDSK 17 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 QSFDDNDS(0.971)EELEDKDS(0.029)K;QSFDDNDS(0.999)EELEDKDS(0.001)K;QS(0.001)FDDNDS(0.999)EELEDKDSK;QSFDDNDS(1)EELEDKDSK;QSFDDNDS(0.845)EELEDKDS(0.155)K;QSFDDNDS(1)EELEDKDSK 144.18 0.00027192 257957800 18348.63 24549.5 23669.63 21718.61 13339.23 12119.36 15649.45 17542.73 21501.4 19789.65 TRUE FALSE 16787.98267 22951.32309 22063.00146 23391.38111 12807.90022 12805.54769 14605.50374 17389.35576 23736.54747 22241.34125 0.754809815 1.031921719 0.991981608 1.051707307 0.575860065 0.575754292 0.656682688 0.781848341 1.067226442 1 14.44095617 -6.24656757 24.96938728 0.749320033 0.965368907 0.203718821 0.170494904 1152.55208 1935104.885 0.052239949 0.067157337 5.67E-07 6.24656757 0.216048874 QSFDDNDS(ph)EELEDKDSK ddPTM_A459_MK2206_30min_R2 6 QSFDDNDSEELEDKDSK 17 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 QSFDDNDS(0.999)EELEDKDS(0.001)K;QSFDDNDS(0.999)EELEDKDS(0.001)K;QSFDDNDS(1)EELEDKDSK;QS(0.003)FDDNDS(0.997)EELEDKDSK;QSFDDNDS(0.997)EELEDKDS(0.003)K;QSFDDNDS(1)EELEDKDSK 135.31 0.00028422 1120073000 674228 640893 666594 519798 536561 313009 751842 542722 435080 741829 TRUE FALSE 725847.4141 609067.1856 688817.9113 477328.8406 515492.9191 324920.7768 653124.2423 613657.6288 472922.472 717623.1805 1.011460379 0.848728416 0.959860175 0.665152483 0.718333707 0.452773525 0.91012144 0.855125149 0.659012257 1 19.45286697 -5.753337416 24.99723901 0.738246227 0.930887579 0.250115303 0.148091273 252.6895819 779622.4848 0.040355799 0.06837656 1.76E-06 5.753337416 0.192641352 QSFTMVADT(ph)PENLR ddPTM_A459_MK2206_30min_R1 3 QSFTMVADTPENLR 14 0 Q14847;Q14847-2;C9J9W2;F6S2S5 Q14847 LASP1 LIM and SH3 domain protein 1 1 QSFTMVADT(1)PENLR;QSFTMVADT(1)PENLR;QSFTMVADT(1)PENLR 218.34 2.48E-08 103643000 9782.7 8875.1 9476.6 7877.4 9731.2 7642.3 10209.4 8677 7117.1 7610.2 TRUE FALSE 8950.629994 8297.329377 8833.354795 8484.118713 9343.585698 8075.000422 9528.349554 8601.137904 7856.948014 8553.00903 1.046489015 0.970106468 1.032777443 0.991945488 1.092432577 0.944112229 1.114034782 1.005627128 0.918617996 1 13.06221635 -8.014064297 24.79934032 0.960246832 1.025954644 0.211825191 0.051896757 867.124683 1528977.38 0.030325825 0.012450313 9.68E-09 8.014064297 0.065707811 QSFTMVADT(ph)PENLR ddPTM_A459_MK2206_30min_R2 4 QSFTMVADTPENLR 14 0 Q14847;Q14847-2;C9J9W2;F6S2S5 Q14847 LASP1 LIM and SH3 domain protein 1 1 QSFTMVADT(1)PENLR;QSFTMVADT(1)PENLR;QSFT(0.008)MVADT(0.992)PENLR;QSFTMVADT(1)PENLR 253.36 2.08E-27 56189100 89777.7 78625.4 74082.7 93245 93095 88838.7 106700 68776.3 74489.7 95663.5 TRUE FALSE 96651.14974 74720.97697 76552.58024 85626.58522 89439.62254 92219.51898 92690.16183 77765.59855 80968.67946 92542.00783 1.044402991 0.807427661 0.82721979 0.925272611 0.966475924 0.996515217 1.001600938 0.840327548 0.874939731 1 16.49782078 -4.718344484 23.93857821 0.914898461 1.044405702 0.228050882 0.071122284 10696.45321 5940983.941 0.019197245 8.847104565 1.91E-05 4.718344484 0.129507241 QSFTQS(ph)LK ddPTM_A459_MK2206_30min_R2 1 QSFTQSLK 8 0 A0A1B0GUA8;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2;Q9H1H9;H0Y9Z7;H0Y307 A0A1B0GUA8 KIF13A Kinesin-like protein KIF13A 1 QSFT(0.005)QS(0.995)LK 104.79 0.014427 2202200 13092 18568 15866 17228 16516 12409 12789 18968 13102 17058 TRUE FALSE 14094.33359 17645.94012 16394.96452 15820.41729 15867.49885 12881.23319 11109.78894 21447.18273 14241.58828 16501.39886 0.854129623 1.069360257 0.993549981 0.958731889 0.961585075 0.78061462 0.673263463 1.299719067 0.863053393 1 14.01030071 -7.76079742 24.99999999 1.061039591 0.909136434 0.189721227 0.14597259 30.40118992 1184090.935 0.07445405 0.039664652 1.73E-08 7.76079742 -0.151903157 QSGDGQES(ph)TEPVENK ddPTM_A459_MK2206_30min_R1 1 QSGDGQESTEPVENK 15 0 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 QSGDGQES(0.74)T(0.26)EPVENK 222.75 1.22E-09 10217000 4722.3 5012.7 5188.7 3447.5 3504.4 3656.4 4830.8 4163.3 5709.4 6532.5 TRUE FALSE 4320.643587 4686.372319 4836.505501 3713.027047 3364.812327 3863.422208 4508.546146 4126.900707 6302.912561 7341.795418 0.588499589 0.638314207 0.658763317 0.505738288 0.458309192 0.526223081 0.614093132 0.562110556 0.858497439 1 12.8419172 -8.396838888 2.804995238 0.997897667 0.56672266 0.862174184 0.058823706 0.095082126 1.437221226 0.06352825 0.017263825 4.01E-09 8.396838888 -0.431175007 QSGDGQEST(ph)EPVENK ddPTM_A459_MK2206_30min_R2 1 QSGDGQESTEPVENK 15 0 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 QS(0.112)GDGQES(0.204)T(0.684)EPVENK 146.84 0.00078476 32548000 53967 36370 49867 41348 35808 31759 49686 36579 27823 49520 TRUE FALSE 58098.75501 34563.91869 51529.54089 37969.73613 34401.998 32967.611 43162.16852 41360.00089 30242.99425 47904.16646 1.212812148 0.721522182 1.075679731 0.792618658 0.718142085 0.688199241 0.901010741 0.863390472 0.631322837 1 15.54786352 -5.784199106 24.01609025 0.789783004 0.975156379 0.265678845 0.152795854 200.6298111 211703.9639 0.040956005 0.060804544 1.64E-06 5.784199106 0.185373376 QSGLSSLVNGKS(ph)PIR ddPTM_A459_MK2206_30min_R1 1 QSGLSSLVNGKSPIR 15 1 H0Y612;Q9UPN9-2;Q9UPN9 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 1 QSGLS(0.002)S(0.002)LVNGKS(0.996)PIR 72.383 0.025383 29196000 3528.5 3705.8 3322.3 2920.8 3927.5 3481 3835.4 4351.7 2995.2 2930.7 TRUE FALSE 3228.382546 3464.551746 3096.791532 3145.760522 3771.059358 3678.091212 3579.547464 4313.653546 3306.561758 3293.777242 0.980145987 1.051847618 0.940194587 0.955061709 1.144904188 1.116678798 1.08676064 1.309637304 1.003881415 1 11.68552727 -6.263625379 24.84137741 1.124933193 0.983842276 0.342213956 0.08583321 185.1061874 2103514.678 0.025215749 0.029988273 5.45E-07 6.263625379 -0.141090916 QSGLSSLVNGKS(ph)PIR ddPTM_A459_MK2206_30min_R2 2 QSGLSSLVNGKSPIR 15 1 H0Y612;Q9UPN9-2;Q9UPN9 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 1 QSGLSSLVNGKS(1)PIR;QSGLS(0.01)S(0.01)LVNGKS(0.98)PIR 88.282 0.0097818 62709000 120788 130225 137073 146074 170102 135415 147231 122710 127624 145867 TRUE FALSE 130035.6222 123758.2159 141642.9454 134139.2869 163422.9408 140568.3127 127899.3928 138748.6183 138724.5048 141107.3717 0.921536703 0.877049968 1.003795505 0.950618563 1.158146019 0.996179795 0.906397669 0.983283982 0.983113094 1 17.10643383 -5.267370824 24.41334633 0.997829643 0.899293332 0.290962122 0.061441636 413.6910918 1702729.116 0.016944772 0.036855577 5.40E-06 5.267370824 -0.098536311 QSGT(ph)PPGMGAPGVPGAAGVGGAGGREPSTASGGGQLNR ddPTM_A459_MK2206_30min_R2 1 QSGTPPGMGAPGVPGAAGVGGAGGREPSTASGGGQLNR 38 1 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 QS(0.043)GT(0.956)PPGMGAPGVPGAAGVGGAGGREPSTASGGGQLNR 42.533 0.040165 4538500 1273.8 2361.3 959.73 3821.3 3556.4 3437.3 2343.3 1218.9 2298.6 2594.1 TRUE FALSE 1371.323107 2244.041276 991.7269192 3509.087566 3416.757867 3568.10886 2035.621895 1378.214415 2498.528073 2509.454729 0.546462581 0.894234612 0.395196178 1.398346631 1.361553897 1.4218662 0.811180959 0.549208718 0.995645805 1 11.2931582 -5.754933851 24.99539556 1.073217354 0.640191515 0.361146835 0.282555401 205.7398327 790479.2164 0.086955821 0.146156342 1.76E-06 5.754933851 -0.433025839 QSHAASAAPQAS(ph)SPPDYTMAWAEYYR ddPTM_A459_MK2206_30min_R1 3 QSHAASAAPQASSPPDYTMAWAEYYR 26 0 Q96I24 Q96I24 FUBP3 Far upstream element-binding protein 3 1 QSHAASAAPQAS(0.568)S(0.424)PPDY(0.003)T(0.005)MAWAEYYR;QSHAASAAPQAS(0.5)S(0.5)PPDYTMAWAEYYR;QSHAASAAPQAS(0.813)S(0.187)PPDYTMAWAEYYR 108.39 4.98E-08 27940900 2842.52 2615.52 2701.39 2053.56 3379.06 2901.37 3162.79 2486.39 2027.65 2366.31 TRUE FALSE 2600.748747 2445.249173 2518.027173 2211.725547 3244.464885 3065.643062 2951.80605 2464.651754 2238.431474 2659.466348 0.977921285 0.919451068 0.946816708 0.831642615 1.219968393 1.152728654 1.109924197 0.926746735 0.841684451 1 11.37692107 -6.233765112 24.99048904 1.047127903 0.920983073 0.237469666 0.107601971 1209.777405 1092456.31 0.035007878 0.04518571 5.84E-07 6.233765112 -0.12614483 QSHAASAAPQASS(ph)PPDYTMAWAEYYR ddPTM_A459_MK2206_30min_R1 1 QSHAASAAPQASSPPDYTMAWAEYYR 26 0 Q96I24 Q96I24 FUBP3 Far upstream element-binding protein 3 1 QSHAASAAPQAS(0.291)S(0.703)PPDY(0.001)T(0.005)MAWAEYYR 108.8 1.68E-08 16210000 708.36 845.23 724.43 674.05 978.51 1029.9 947.33 770.49 775.21 764.67 TRUE FALSE 648.1102623 790.2053734 675.25771 725.9654478 939.5338747 1088.212048 884.1353442 763.7536872 855.7958536 859.4030926 0.754140016 0.91948165 0.785728741 0.84473218 1.093240044 1.266241718 1.028778407 0.888702512 0.995802623 1 9.747191158 -6.242501976 12.43701074 1.050100784 0.829782044 0.544633642 0.098220241 1.237235906 809.9144926 0.032214963 0.041032288 5.72E-07 6.242501976 -0.220318741 QSHAASAAPQASS(ph)PPDYTMAWAEYYR ddPTM_A459_MK2206_30min_R2 1 QSHAASAAPQASSPPDYTMAWAEYYR 26 0 Q96I24 Q96I24 FUBP3 Far upstream element-binding protein 3 1 QSHAASAAPQAS(0.21)S(0.79)PPDYTMAWAEYYR 145.59 7.23E-11 11465000 14145 16690 16849 19890 17758 19971 16602 15273 17806 15905 TRUE FALSE 15227.95208 15861.19887 17410.73725 18264.92338 17060.73169 20731.0104 14422.13746 17269.23354 19354.73369 15386.02115 0.989726449 1.03088373 1.131594522 1.187111547 1.108846239 1.347392558 0.937353284 1.122397621 1.257942746 1 13.90933258 -5.192890781 3.10564191 1.143055316 0.996985825 0.176513751 0.110182514 0.429375406 7.993574597 0.028522188 0.093496715 6.41E-06 5.192890781 -0.146069491 QSHS(ph)ESPSLQSK ddPTM_A459_MK2206_30min_R1 1 QSHSESPSLQSK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QS(0.002)HS(0.769)ES(0.223)PS(0.005)LQSK 195.94 0.00016555 71458000 6233.5 6087.1 5697.2 4489.8 5347.2 5884 7526.6 5879.1 4528.6 4699.6 TRUE FALSE 5703.308092 5690.828684 5310.489937 4835.605174 5134.209701 6217.146995 7024.514247 5827.699649 4999.364176 5281.821928 1.079799389 1.07743668 1.005427674 0.915518402 0.972052782 1.177083794 1.329941513 1.10335027 0.946522667 1 12.36681995 -6.75879316 24.96828877 1.131499161 1.008282635 0.172223912 0.106574352 110.7999661 1045451.278 0.038670197 0.037009572 1.74E-07 6.75879316 -0.123216526 QSHS(ph)ESPSLQSK ddPTM_A459_MK2206_30min_R2 2 QSHSESPSLQSK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QS(0.009)HS(0.858)ES(0.132)PS(0.001)LQSK;QS(0.024)HS(0.973)ES(0.003)PS(0.001)LQSK 222.55 2.00E-08 8310200 30867 36717 34421 42415 36001 34491 43106 32691 34057 38249 TRUE FALSE 33230.20125 34893.68717 35568.57896 38949.55882 34587.41985 35803.57917 37446.13042 36963.82594 37019.2163 37000.93826 0.898090773 0.943048712 0.961288568 1.052664085 0.934771427 0.967639764 1.012031915 0.99899699 1.000493988 1 15.17527423 -5.082180932 1.871952049 0.99232028 0.895837907 0.514341372 0.029578207 0.398477106 2.195618198 0.008394461 0.054604718 8.28E-06 5.082180932 -0.096482373 QSHSES(ph)PSLQSK ddPTM_A459_MK2206_30min_R1 7 QSHSESPSLQSK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QS(0.001)HS(0.015)ES(0.98)PS(0.004)LQSK;QS(0.001)HS(0.002)ES(0.952)PS(0.046)LQSK;QSHSES(0.768)PS(0.231)LQSK;QSHS(0.009)ES(0.92)PS(0.071)LQSK;QSHSES(1)PSLQSK;QSHS(0.006)ES(0.992)PS(0.002)LQSK;QSHS(0.009)ES(0.967)PS(0.024)LQSK 282.73 2.93E-44 712709000 43532.4 39986.1 44535.5 35590.2 44662.9 39909.4 46018.7 44516 34226.5 34247.6 TRUE FALSE 39829.74078 37382.99762 41512.55434 38331.36337 42883.88212 42169.03574 42948.87649 44126.80131 37784.46716 38490.45124 1.034795371 0.971227835 1.078515658 0.995866822 1.114143397 1.095571353 1.115831982 1.146435022 0.981658202 1 15.23221296 -5.275637757 24.31848165 1.073282714 1.003011604 0.15987002 0.055798305 764.7579957 1309852.418 0.014482969 0.030386213 5.30E-06 5.275637757 -0.07027111 QSHSES(ph)PSLQSK ddPTM_A459_MK2206_30min_R2 7 QSHSESPSLQSK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QS(0.001)HS(0.001)ES(0.997)PS(0.001)LQSK;QS(0.001)HS(0.006)ES(0.98)PS(0.013)LQSK;QS(0.005)HS(0.01)ES(0.983)PS(0.002)LQSK;QS(0.026)HS(0.011)ES(0.954)PS(0.009)LQSK;QSHSES(0.669)PS(0.33)LQSK;QS(0.015)HS(0.01)ES(0.86)PS(0.11)LQS(0.005)K;QS(0.018)HS(0.022)ES(0.938)PS(0.022)LQSK 128.74 0.0015932 1149094200 298903.8 327653.3 323057 343379 345506 298727.7 372591 289744 292181.1 327837 TRUE FALSE 321788.1047 311382.5136 333827.5591 315323.8373 331939.6984 310095.992 323669.3541 327614.5356 317594.4839 317139.7055 1.01465726 0.981846512 1.052619881 0.994274232 1.046667108 0.977789872 1.020589187 1.033029072 1.001434 1 18.27475899 QSHSGSIS(ph)PYPK ddPTM_A459_MK2206_30min_R1 6 QSHSGSISPYPK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QSHS(0.001)GS(0.026)IS(0.973)PYPK;QSHSGSIS(1)PYPK;QSHSGSIS(1)PYPK;QSHSGSIS(1)PYPK;QSHSGSIS(1)PYPK;QSHSGSIS(1)PYPK 230.57 5.40E-10 649120800 38912.3 36878.6 40467.6 29759.2 33367 32269 40045.4 33899.4 33150.3 35324.5 TRUE FALSE 35602.60455 34477.79644 37720.77206 32051.25874 32037.92173 34096.04289 37374.04443 33603.02112 36596.39231 39700.76575 0.896773749 0.868441598 0.950127066 0.80732092 0.806984982 0.858825825 0.941393541 0.84640738 0.921805704 1 15.27687921 -8.571930241 3.903549418 0.999943845 0.872277577 0.429165927 0.045632045 0.249774089 11.35657308 0.045817846 0.012017324 2.68E-09 8.571930241 -0.127666269 QSHSGSIS(ph)PYPK ddPTM_A459_MK2206_30min_R2 7 QSHSGSISPYPK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QSHSGSIS(1)PYPK;QSHSGSIS(1)PYPK;QSHSGSIS(1)PYPK;QSHS(0.001)GS(0.087)IS(0.912)PYPK;QSHSGS(0.002)IS(0.998)PYPK;QSHSGSIS(1)PYPK;QSHSGSIS(1)PYPK 122.96 0.0022587 956336000 594985.8 716497.4 652562.6 695151 704573 576791 783813 595042.9 562109.1 683284.6 TRUE FALSE 640538.3703 680917.181 674318.7114 638354.9396 676907.9238 598741.1857 680897.4116 672817.0501 611000.3335 660989.0795 0.969060443 1.030148912 1.020166191 0.965757165 1.02408337 0.905826139 1.030119003 1.017894351 0.924372811 1 19.33426691 -5.754049592 24.96270644 0.982586724 1.008827554 0.070732559 0.041545169 473.6698913 1600040.011 0.011035514 0.018622914 1.76E-06 5.754049592 0.026240831 QSLS(ph)PMSQRPVLK ddPTM_A459_MK2206_30min_R1 2 QSLSPMSQRPVLK 13 1 Q9NSV4-1;Q9NSV4-7;Q9NSV4-6;Q9NSV4-5;Q9NSV4-4;Q9NSV4 Q9NSV4-1 DIAPH3 Protein diaphanous homolog 3 1 QS(0.012)LS(0.975)PMS(0.014)QRPVLK;QSLS(0.998)PMS(0.002)QRPVLK 214.48 8.94E-06 32875000 6596.4 6436.1 6719.4 5272.8 6654.9 6309.8 7174.6 6724.1 5760.8 5586.4 TRUE FALSE 6035.341541 6017.10872 6263.305849 5678.91197 6389.821241 6667.055423 6695.995525 6665.311903 6359.655775 6278.485407 0.961273484 0.958369468 0.99758229 0.904503491 1.017732913 1.061889133 1.066498541 1.061611435 1.012928336 1 12.61620086 -6.478276562 7.227115044 1.045471418 0.958677853 0.653642502 0.029254002 0.145732028 20.12037759 0.008912251 0.009975275 3.32E-07 6.478276562 -0.086793564 QSLTS(ph)PDSQSAR ddPTM_A459_MK2206_30min_R2 1 QSLTSPDSQSAR 12 0 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 QS(0.073)LT(0.08)S(0.846)PDS(0.001)QSAR 80.102 0.040782 3643900 19800 22220 21075 21888 22486 20492 27397 19354 20583 25066 TRUE FALSE 21315.90322 21116.58711 21777.62998 20099.68038 21603.08666 21271.83742 23799.74099 21883.63425 22373.27213 24248.09847 0.87907525 0.870855384 0.898117022 0.828917798 0.890918794 0.877257961 0.981509582 0.902488675 0.922681511 1 14.565584 -7.190594048 8.751836961 0.94347871 0.873684035 0.593113319 0.03114449 0.29518479 34.43518303 0.011563287 0.00894786 6.45E-08 7.190594048 -0.069794675 QSMAFSILNT(ph)PK ddPTM_A459_MK2206_30min_R1 2 QSMAFSILNTPK 12 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 QSMAFS(0.002)ILNT(0.998)PK;QSMAFSILNT(1)PK 184.87 0.00024432 96876000 10242.3 11763.5 11705.3 9206 8653.4 7211.6 8565 9322.1 8834.5 9311.1 TRUE FALSE 9371.138601 10997.69401 10910.77685 9915.047715 8308.716754 7619.91456 7993.644478 9240.597863 9752.87789 10464.62936 0.895506021 1.050939659 1.042633854 0.947481977 0.793980987 0.728159048 0.76387268 0.883031548 0.931985028 1 13.35323359 -6.086496634 4.429859889 0.834656231 1.001335041 0.372087594 0.085297835 0.217752045 7.560309664 0.026415638 0.035267231 8.19E-07 6.086496634 0.16667881 QSMAFSILNT(ph)PK ddPTM_A459_MK2206_30min_R2 2 QSMAFSILNTPK 12 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 QSMAFS(0.008)ILNT(0.992)PK;QSMAFSILNT(1)PK 118.08 0.010779 47783000 145156 142270 147347 119016 131907 109985 150064 105063 109822 145710 TRUE FALSE 156269.255 135205.0787 152259.4754 109292.0121 126727.6684 114170.5562 130360.4165 118795.0948 119374.119 140955.4946 1.108642521 0.959204031 1.08019539 0.77536539 0.899061571 0.809975919 0.924833877 0.84278442 0.846892272 1 17.10488019 -5.751142845 24.99959214 0.865558169 1.04033302 0.581225795 0.069021035 138.2826512 335741.7721 0.017292136 0.029530039 1.77E-06 5.751142845 0.174774852 QSMDMS(ph)PIK ddPTM_A459_MK2206_30min_R1 4 QSMDMSPIK 9 0 F5H658;Q14562 F5H658 DHX8 ATP-dependent RNA helicase DHX8 1 QSMDMS(1)PIK;QS(0.002)MDMS(0.998)PIK;QSMDMS(1)PIK;QSMDMS(1)PIK 134.18 0.0029441 134064000 22852.3 24368.2 24903 19849.7 20288.5 19035.8 22023.8 20508 20384.8 18341.9 TRUE FALSE 20908.59188 22781.82575 23212.65374 21378.52733 19480.36608 20113.59055 20554.63249 20328.70072 22503.87291 20614.23305 1.014279398 1.105150296 1.126049836 1.037076048 0.944995918 0.975713746 0.997108767 0.986148778 1.091666756 1 14.33135317 -5.995815307 15.08647638 0.996724246 1.083730846 0.414379209 0.043962773 0.852343049 3054.059347 0.012615129 0.018389383 1.01E-06 5.995815307 0.0870066 QSMDMS(ph)PIK ddPTM_A459_MK2206_30min_R2 6 QSMDMSPIK 9 0 F5H658;Q14562 F5H658 DHX8 ATP-dependent RNA helicase DHX8 1 QSMDMS(1)PIK;QSMDMS(1)PIK;QSMDMS(1)PIK;QS(0.032)MDMS(0.968)PIK;QSMDMS(1)PIK;QSMDMS(1)PIK 130.69 0.003784 175922000 364086 369471 358159 375276 337241 291331 415166 295959 284015 387303 TRUE FALSE 391960.7041 351123.6074 370099.8423 344614.7504 323999.2238 302417.8054 360654.2055 334641.8575 308718.1113 374665.3348 1.046162182 0.937165985 0.987814478 0.919793529 0.864769686 0.80716783 0.962603614 0.893175392 0.823983653 1 18.51524298 -5.88430287 3.210976198 0.886054936 0.986201503 0.348803035 0.059608584 0.271550226 5.549366169 0.017106329 0.027156274 1.31E-06 5.88430287 0.100146567 QSNAS(ph)SDVEVEEK ddPTM_A459_MK2206_30min_R1 1 QSNASSDVEVEEK 13 0 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 QSNAS(0.5)S(0.5)DVEVEEK 262.42 6.95E-30 26475000 4245.8 4631.5 4949.1 3561 3155.1 3504.7 4358.6 3830.5 5520.9 5642.9 TRUE FALSE 3884.672414 4329.988508 4613.168881 3835.268837 3029.425686 3703.133085 4067.845747 3797.010342 6094.817312 6341.985054 0.612532572 0.682749718 0.727401412 0.604742648 0.477677834 0.583907571 0.641415221 0.598710074 0.961026754 1 12.63071876 -8.281161133 6.128942599 0.987219534 0.616505779 0.845703528 0.062269079 0.071088421 10.48982917 0.061490015 0.017661506 5.23E-09 8.281161133 -0.370713755 QSNAS(ph)SDVEVEEKETSVSK ddPTM_A459_MK2206_30min_R2 1 QSNASSDVEVEEKETSVSK 19 1 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 QS(0.042)NAS(0.479)S(0.479)DVEVEEKETSVSK 60.062 0.022302 93713000 53988 66533 68010 57528 56134 40840 79128 52772 45165 58998 TRUE FALSE 58121.36279 63229.06797 70277.41946 52827.77838 53929.89711 42394.19482 68738.39855 59669.48159 49093.37006 57072.90009 1.018370587 1.107864991 1.231362334 0.92561931 0.944930028 0.742807791 1.204396455 1.045495875 0.860187059 1 15.80051825 -5.780069891 24.99958977 0.962830802 1.118065912 0.260421808 0.122515048 339.3014366 455294.8929 0.035764836 0.053155085 1.66E-06 5.780069891 0.155235111 QSNASS(ph)DVEVEEK ddPTM_A459_MK2206_30min_R1 3 QSNASSDVEVEEK 13 0 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 QSNAS(0.083)S(0.917)DVEVEEK;QSNAS(0.026)S(0.974)DVEVEEK;QSNAS(0.058)S(0.942)DVEVEEK 230.67 4.01E-13 131234000 11197.2 12042.9 12523.8 9241.3 8331.4 9025.36 12397 8906 13572.7 14250.2 TRUE FALSE 10244.81934 11258.90502 11673.71935 9953.066527 7999.542696 9536.368084 11570.01875 8828.135781 14983.63074 16015.62236 0.63967663 0.702995161 0.728895767 0.621459866 0.499483724 0.595441618 0.722420802 0.551220276 0.935563439 1 13.96719224 -8.34890552 5.115366572 0.990015841 0.635485933 0.784509974 0.070388243 0.106218138 4.432117382 0.071813277 0.018839484 4.48E-09 8.34890552 -0.354529908 QSNASS(ph)DVEVEEK ddPTM_A459_MK2206_30min_R2 5 QSNASSDVEVEEK 13 0 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 QSNAS(0.023)S(0.977)DVEVEEK;QSNAS(0.029)S(0.971)DVEVEEK;QSNAS(0.218)S(0.781)DVEVEEK;QSNAS(0.226)S(0.774)DVEVEEK;QSNAS(0.074)S(0.926)DVEVEEK 295.22 3.47E-61 729004700 724971 558348 617978 591579 489608 413987 685778 526957 364701 635018 TRUE FALSE 780475.3372 530621.2502 638581.0781 543245.1033 470383.5298 429741.5654 595734.5248 595832.0892 396422.0338 614297.4147 1.270517047 0.863785583 1.039530792 0.88433565 0.765726045 0.699565968 0.969781918 0.96994074 0.645325903 1 19.22857779 -1.869927488 1.018512566 0.852928855 199.9995165 0.462926246 0.126924277 762.1168705 2.124204286 0.03978446 352795.7911 0.013491881 1.869927488 199.1465876 QSNASS(ph)DVEVEEKETSVSK ddPTM_A459_MK2206_30min_R1 2 QSNASSDVEVEEKETSVSK 19 1 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 QS(0.032)NAS(0.156)S(0.812)DVEVEEKETSVSK;QS(0.047)NAS(0.177)S(0.776)DVEVEEKETSVSK 100.27 0.00070814 106552000 5823.9 6705.2 6449.8 4937.3 5221.1 4864 5285.3 5276.9 5525.8 4798.7 TRUE FALSE 5328.546722 6268.690261 6012.005546 5317.571701 5013.132531 5139.395477 4932.727281 5230.76462 6100.226684 5393.199184 0.988012224 1.16233242 1.114738273 0.98597725 0.929528534 0.952940046 0.914619897 0.969881594 1.131096122 1 12.3969256 -5.792546513 7.714982168 0.975501918 1.095772224 0.320940129 0.069042042 0.20630318 41.37801055 0.019687899 0.029849324 1.61E-06 5.792546513 0.120270306 QSNVAAPGDAT(ph)PPAEK ddPTM_A459_MK2206_30min_R2 2 QSNVAAPGDATPPAEK 16 0 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 QS(0.001)NVAAPGDAT(0.999)PPAEK;QS(0.02)NVAAPGDAT(0.98)PPAEK 128.44 0.0022307 16658700 96883 90038 88005 86588 82544 74760 93277 65230 64112 87900 TRUE FALSE 104300.437 85566.84385 90939.04278 79513.48342 79302.90781 77605.04419 81029.61785 73755.78497 69688.34587 85031.8302 1.226604634 1.006291922 1.069470604 0.935102576 0.932626143 0.912658754 0.952932774 0.867390303 0.819555991 1 16.37571537 -1.522878745 0.488846065 0.89832512 10.04454522 0.729986513 0.056269356 51.10569735 0.559691242 0.030940913 477.247697 0.03 1.522878745 9.146220103 QSNVAAPGDAT(ph)PPAEKK ddPTM_A459_MK2206_30min_R1 1 QSNVAAPGDATPPAEKK 17 1 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 QSNVAAPGDAT(1)PPAEKK 84.156 0.015577 3073500 4676.6 5187.8 4694.9 4254 4627.5 3536.2 3994.9 4957.5 4442.4 3188.3 TRUE FALSE 4278.830612 4850.073277 4376.223269 4581.643817 4443.176876 3736.416588 3728.40751 4914.1571 4904.203377 3583.290674 1.194106479 1.353524935 1.221286149 1.278613496 1.239971099 1.042733322 1.040498204 1.371409005 1.368631189 1 11.80706936 -6.539436509 24.95716446 1.175801488 1.26474934 0.119154388 0.125426734 618.7738252 932658.2864 0.043909444 0.043919943 2.89E-07 6.539436509 0.088947852 QSNVEDS(ph)PEK ddPTM_A459_MK2206_30min_R2 1 QSNVEDSPEK 10 0 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 QS(0.001)NVEDS(0.999)PEK 83.877 0.047754 0 17750 12716 13862 16243 12450 16786 13679 14565 17332 25229 TRUE FALSE 19108.95365 12084.54193 14324.15216 14915.89494 11961.15044 17424.80299 11882.93087 16468.69551 18839.50603 24405.7798 0.782968371 0.495150822 0.58691639 0.611162399 0.490094992 0.713962149 0.48689003 0.674786696 0.771928051 1 14.57493523 -8.533750628 1.632059865 0.997560416 0.591954415 0.642674047 0.092624414 0.231303384 1.373907002 0.081939886 0.023744305 2.93E-09 8.533750628 -0.405606001 QSPAS(ph)PPPLGGGAPVR ddPTM_A459_MK2206_30min_R1 3 QSPASPPPLGGGAPVR 16 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 QS(0.031)PAS(0.969)PPPLGGGAPVR;QS(0.019)PAS(0.981)PPPLGGGAPVR;QS(0.12)PAS(0.88)PPPLGGGAPVR 180.93 9.92E-07 39351000 5600.75 6631.4 5893.56 5476.14 6810.9 5855.66 6979.2 6861.2 6618.9 6003 TRUE FALSE 5124.376802 6199.694655 5493.521568 5897.913252 6539.607431 6187.202409 6513.630302 6801.213252 7306.958341 6746.69696 0.759538606 0.918922947 0.814253493 0.874192703 0.969305049 0.917071338 0.965454702 1.008080442 1.083042322 1 12.71996565 -6.583049935 0.54535821 1.040944904 0.807982131 0.728813264 0.04746294 0.52885284 0.337422165 0.03896536 0.057164962 2.61E-07 6.583049935 -0.232962773 QSPAS(ph)PPPLGGGAPVR ddPTM_A459_MK2206_30min_R2 2 QSPASPPPLGGGAPVR 16 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 QS(0.307)PAS(0.693)PPPLGGGAPVR;QS(0.008)PAS(0.992)PPPLGGGAPVR 111.7 0.0027464 0 33264 28200 26119 28914 25509 32820 37467 23868.4 32997 26341 TRUE FALSE 35810.71742 26799.62901 26989.79442 26551.63371 24507.38849 34068.9881 32547.53789 26988.08183 35867.01942 25481.49533 1.405361693 1.051729055 1.059191938 1.041996687 0.961771991 1.337008981 1.277300938 1.059124729 1.407571218 1 14.63716232 -6.766918225 24.99996039 1.223715179 1.095170657 0.110983011 0.157057736 281.5340976 1284631.741 0.053340467 0.048377974 1.71E-07 6.766918225 -0.128544522 QSPDHPT(ph)VGAGVLHITENGPTEVDYSPSDMQDSSLSHK ddPTM_A459_MK2206_30min_R1 6 QSPDHPTVGAGVLHITENGPTEVDYSPSDMQDSSLSHK 38 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QS(0.355)PDHPT(0.525)VGAGVLHIT(0.023)ENGPT(0.023)EVDY(0.033)S(0.04)PS(0.001)DMQDSSLSHK;QS(0.012)PDHPT(0.973)VGAGVLHIT(0.008)ENGPT(0.008)EVDYSPSDMQDSSLSHK;QS(0.284)PDHPT(0.709)VGAGVLHIT(0.005)ENGPT(0.001)EVDYSPSDMQDSSLSHK;QS(0.043)PDHPT(0.956)VGAGVLHIT(0.001)ENGPTEVDYSPSDMQDSSLSHK;QS(0.175)PDHPT(0.822)VGAGVLHIT(0.001)ENGPT(0.002)EVDY(0.001)SPSDMQDSSLSHK;QS(0.172)PDHPT(0.769)VGAGVLHIT(0.023)ENGPT(0.023)EVDY(0.006)S(0.007)PS(0.001)DMQDSSLSHK 108.68 1.06E-18 142112000 25435.7 11573.28 17724.6 10597.05 27876.6 31493.9 30348.7 20783 13716.6 13403.97 TRUE FALSE 23272.26015 10819.85737 16521.50354 11413.23663 26766.21599 33277.0574 28324.1936 20601.29642 15142.48966 15064.555 1.544835553 0.71823279 1.096713679 0.75762189 1.776767783 2.20896385 1.880187871 1.36753435 1.005173379 1 13.87887044 -6.266496411 24.98078754 1.608628397 1.011939868 0.259768286 0.411975353 531.4752606 2625384.814 0.13196493 0.154256168 5.41E-07 6.266496411 -0.596688529 QSPDHPT(ph)VGAGVLHITENGPTEVDYSPSDMQDSSLSHK ddPTM_A459_MK2206_30min_R2 6 QSPDHPTVGAGVLHITENGPTEVDYSPSDMQDSSLSHK 38 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QS(0.036)PDHPT(0.95)VGAGVLHIT(0.01)ENGPT(0.003)EVDYSPSDMQDSSLSHK;QS(0.116)PDHPT(0.824)VGAGVLHIT(0.011)ENGPT(0.046)EVDY(0.002)S(0.001)PSDMQDSSLSHK;QS(0.353)PDHPT(0.517)VGAGVLHIT(0.106)ENGPT(0.023)EVDYSPSDMQDSSLSHK;QS(0.053)PDHPT(0.845)VGAGVLHIT(0.077)ENGPT(0.023)EVDY(0.001)SPSDMQDSSLSHK;QS(0.162)PDHPT(0.812)VGAGVLHIT(0.006)ENGPT(0.02)EVDYSPSDMQDSSLSHK;QS(0.411)PDHPT(0.586)VGAGVLHIT(0.002)ENGPT(0.001)EVDYSPSDMQDSSLSHK 78.414 8.83E-07 224904400 79532.1 153857.4 122329.2 195997 192307 199397 203767 148282.1 170517.1 146337.4 TRUE FALSE 85621.13873 146217.0652 126407.5945 179983.4181 184756.0609 206985.1926 177012.1481 167663.0796 185348.3691 141562.4226 0.604829567 1.032880496 0.892945968 1.271406739 1.30512079 1.462147855 1.250417624 1.184375603 1.309304868 1 17.11107883 -4.875177166 0.9123522 1.273864567 0.381029253 0.651763163 0.140752918 1.156709283 0.833745244 0.049419745 1.001281966 1.33E-05 4.875177166 -0.892835314 QSPGST(ph)SPKPPHTLSR ddPTM_A459_MK2206_30min_R1 2 QSPGSTSPKPPHTLSR 16 1 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 QS(0.017)PGS(0.181)T(0.622)S(0.181)PKPPHTLSR;QS(0.002)PGS(0.156)T(0.56)S(0.282)PKPPHTLSR 67.396 0.028708 13033700 3464.7 3194 3348.8 2401.16 3166.3 3083.6 3431.9 2928.9 2860.5 3063.7 TRUE FALSE 3170.009071 2986.070019 3121.492786 2586.097759 3040.179566 3258.190767 3202.964213 2903.292936 3157.859211 3443.254286 0.920643324 0.867223206 0.906553082 0.75106209 0.882937859 0.946253311 0.930214253 0.843182842 0.917114726 1 11.74955701 -6.529489431 23.94393994 0.917382448 0.85901384 0.231300569 0.055775122 169.5634268 614150.7149 0.018530169 0.018582875 2.95E-07 6.529489431 -0.058368607 QSPGST(ph)SPKPPHTLSR ddPTM_A459_MK2206_30min_R2 1 QSPGSTSPKPPHTLSR 16 1 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 QS(0.003)PGS(0.089)T(0.454)S(0.454)PKPPHTLSR 57.148 0.048362 15844000 28871 24390 22904 28091 28937 28621 39513 26204 19122 28097 TRUE FALSE 31081.38596 23178.82807 23667.60793 25795.87544 27800.78798 29710.19221 34324.89564 29628.95277 20785.197 27180.19719 1.143530554 0.852783661 0.870766601 0.949068738 1.022832461 1.093082291 1.262864114 1.090093371 0.764718403 1 14.7302683 -6.364368865 3.422755943 1.061074616 0.940333127 0.073514464 0.137167674 0.540159694 11.86552029 0.046144969 0.053382071 4.32E-07 6.364368865 -0.120741489 QSPGSTS(ph)PKPPHTLSR ddPTM_A459_MK2206_30min_R2 1 QSPGSTSPKPPHTLSR 16 1 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 QS(0.009)PGS(0.212)T(0.212)S(0.567)PKPPHTLSR 54.811 0.04023 36288000 64185 69718 66056 61179 77419 59282 80411 62074 57753 90478 TRUE FALSE 69099.05295 66255.9055 68258.27407 56180.48 74379.14106 61538.01805 69852.93911 70187.28493 62776.25155 87525.71027 0.789471491 0.756987922 0.779865412 0.641874026 0.849797629 0.703085046 0.798084802 0.801904774 0.717232129 1 16.41741924 -11.18237677 2.985283124 1.023083563 0.76019145 0.621905348 0.056183165 29071622.65 28774003.49 5132499.743 0.012971791 6.57E-12 11.18237677 -0.262892113 QSPSPSEVSQS(ph)PGR ddPTM_A459_MK2206_30min_R1 1 QSPSPSEVSQSPGR 14 0 A0A5F9ZH11;P55201-3;P55201;P55201-2;C9JHC0;A0A5F9ZHX4;A0A5F9ZHW9;P55201-4 A0A5F9ZH11 BRPF1 Peregrin 1 QSPS(0.001)PS(0.001)EVS(0.004)QS(0.994)PGR 99.915 0.014062 0 629.38 620.8 468.4 333.91 517.99 430.2 452.6 383.55 388.68 370.4 TRUE FALSE 575.847926 580.3858072 436.606313 359.6278061 497.3573614 454.5575522 422.4078798 380.1966628 429.0846769 416.2879484 1.38329233 1.394193153 1.048808438 0.863891947 1.194743598 1.091930607 1.014701198 0.913302113 1.030740089 1 8.701437983 -5.277707829 5.609169881 1.018503965 1.391728757 0.750969904 0.08508812 0.076035475 8.777179148 0.023242557 0.053736542 5.28E-06 5.277707829 0.373224792 QSPSSS(ph)PTR ddPTM_A459_MK2206_30min_R2 1 QSPSSSPTR 9 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 QS(0.001)PS(0.031)S(0.099)S(0.769)PT(0.099)R 94.82 0.022927 2785200 4726.7 3596.6 6071 6922.2 10231 8310.1 18229 42378 32813 26141 TRUE FALSE 5088.579786 3417.998074 6273.40411 6356.634117 9829.279533 8626.346679 15835.5104 47916.95011 35667.01543 25288.02131 0.201224909 0.135162733 0.248078093 0.251369375 0.388693105 0.34112383 0.626205989 1.894847743 1.410431247 1 14.62616654 -7.597657804 4.722783211 1.481712021 0.274355462 0.855064524 0.215411039 0.068962908 2.874978105 0.104229021 0.058595403 2.53E-08 7.597657804 -1.207356559 QSQQPMKPIS(ph)PVKDPVS(ph)PASQK ddPTM_A459_MK2206_30min_R2 1 QSQQPMKPISPVKDPVSPASQK 22 2 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 2 QSQQPMKPIS(1)PVKDPVS(0.967)PAS(0.033)QK 92.924 0.0031743 8493600 46668 39157 43863 40083 33636 26535 50367 32774 29134 52582 TRUE FALSE 50240.93796 37212.52032 45325.37053 36808.09068 32315.28163 27544.80802 43753.7524 37057.67433 31668.02266 50866.25365 0.987706669 0.731575802 0.891069565 0.723624958 0.635299031 0.541514384 0.860172497 0.728531623 0.622574308 1 15.63442122 -1.522883419 0.877777704 0.722447391 107.3873899 0.211925058 0.131812322 1155.203821 2.834553481 0.043746763 246506.9522 0.029999677 1.522883419 106.6649425 QSQQPMKPIS(ph)PVKDPVSPASQK ddPTM_A459_MK2206_30min_R2 2 QSQQPMKPISPVKDPVSPASQK 22 2 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 QSQQPMKPIS(1)PVKDPVSPASQK;QS(0.001)QQPMKPIS(0.998)PVKDPVS(0.001)PASQK 136.61 1.72E-05 48045800 204101 201619 225340 192051 187611 131067 223217 164882 138606 238511 TRUE FALSE 219727.1295 191606.8936 232852.7231 176359.819 180244.4495 136054.8465 193908.3398 186432.6435 150661.6993 230728.4056 0.952319368 0.830443452 1.009207005 0.764361105 0.781197482 0.589675321 0.84041815 0.808017734 0.652982882 1 17.8158361 -5.784611045 24.19165204 0.763719364 0.920635256 0.281213899 0.111138109 186.4789615 194686.745 0.029898003 0.044382654 1.64E-06 5.784611045 0.156915892 QSS(ph)GASSSSFSSSR ddPTM_A459_MK2206_30min_R1 1 QSSGASSSSFSSSR 14 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;F6S8Q4;A0A0D9SFB3;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 QS(0.002)S(0.992)GAS(0.005)S(0.001)SSFSSSR 115.09 0.0028476 5145500 1369.9 1149.7 1457 1012 1225.1 1155.9 1271.3 1533.9 672.08 816.13 TRUE FALSE 1253.382811 1074.854321 1358.102899 1089.944415 1176.301673 1221.346059 1186.493897 1520.489274 741.9451211 917.2383459 1.366474501 1.171837534 1.480643396 1.188289195 1.282438396 1.3315471 1.293550255 1.657681758 0.808890213 1 9.841152859 -8.281752643 24.97753948 0.904445002 1.335523088 0.612630855 0.140403694 597.1471556 734255.1265 0.1283488 0.033302988 5.23E-09 8.281752643 0.431078086 QSS(ph)GASSSSFSSSR ddPTM_A459_MK2206_30min_R2 4 QSSGASSSSFSSSR 14 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;F6S8Q4;A0A0D9SFB3;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 QS(0.075)S(0.902)GAS(0.012)S(0.002)S(0.002)S(0.006)FSSSR;QS(0.004)S(0.995)GASSSSFSSSR;QS(0.013)S(0.987)GASSSSFSSSR;QS(0.224)S(0.737)GAS(0.021)S(0.014)S(0.004)SFSSSR 193.31 0.00011504 18668700 46816 63950 53199.6 49474 41415.7 64102 62287 47422 56624 37030.2 TRUE FALSE 50400.26896 60774.33599 54973.24811 45431.81594 39789.51152 66541.44653 54108.64208 53620.21822 61549.05317 35821.90761 1.406967756 1.696568945 1.534626484 1.268269028 1.110759147 1.857562899 1.510490247 1.496855467 1.718195855 1 15.12855455 -5.539557548 24.84947936 1.448652358 1.567725799 0.040484637 0.252279924 828.7908377 1234797.047 0.06871357 0.119050461 2.89E-06 5.539557548 0.119073442 QSS(ph)LTFQSSDPEQMR ddPTM_A459_MK2206_30min_R2 2 QSSLTFQSSDPEQMR 15 0 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 QS(0.088)S(0.912)LTFQSSDPEQMR;QS(0.081)S(0.917)LT(0.001)FQSSDPEQMR 171.15 4.77E-05 6327500 17014.9 16633.8 18812.3 19869 19159.4 19381.6 24268.9 15446.5 20181.4 18129.8 TRUE FALSE 18317.57383 15807.78968 19439.49269 18245.63914 18407.10569 20119.18037 21082.36428 17465.41059 21936.74169 17538.22611 1.044437089 0.90133344 1.108407006 1.040335495 1.049542044 1.147161648 1.202080766 0.995848182 1.250795922 1 14.09821521 -5.785694488 0.966070052 1.118821792 0.976599578 0.211608657 0.087989035 0.951627757 1.677217042 0.034084922 0.101359116 1.64E-06 5.785694488 -0.142222214 QSS(ph)PSGSEQLVR ddPTM_A459_MK2206_30min_R2 3 QSSPSGSEQLVR 12 0 O15231-3;O15231-2;H7BZT5;O15231-4;O15231-7;O15231;O15231-8;O15231-6;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 QS(0.386)S(0.591)PS(0.008)GS(0.015)EQLVR;QS(0.01)S(0.989)PS(0.001)GSEQLVR;QS(0.013)S(0.971)PS(0.013)GS(0.004)EQLVR 204.17 3.64E-05 83458200 142354 169827 164284 171323 154532 147633 169395 143838 134408 158887 TRUE FALSE 153252.7317 161393.6381 169761.1466 157325.3629 148464.2972 153251.2773 147153.233 162638.1205 146098.5649 153702.5302 0.997073578 1.050038916 1.104478543 1.023570417 0.96591967 0.997064115 0.957389789 1.058135609 0.950528041 1 17.22978139 -6.002238436 24.84389499 0.990417782 1.052738419 0.364985461 0.037130575 87.29005898 968848.3464 0.010305471 0.015007108 9.95E-07 6.002238436 0.062320637 QSS(ph)SEQCSDGEGR ddPTM_A459_MK2206_30min_R2 2 QSSSEQCSDGEGR 13 0 A0A3B3IRT3;O60343-2;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 QS(0.081)S(0.905)S(0.014)EQCSDGEGR;QS(0.043)S(0.914)S(0.043)EQCSDGEGR 169.15 0.00026145 3779300 9038.9 10320 10415.8 12740.9 11403.7 8541.4 9801.5 11750.3 11837.6 9923.7 TRUE FALSE 9730.925134 9807.523807 10763.05757 11699.92771 10955.93344 8866.448962 8514.551276 13286.10455 12867.21305 9599.890482 1.013649599 1.021628718 1.121164621 1.218756374 1.141256086 0.92359897 0.886942543 1.383985013 1.340349984 1 13.22880223 -7.770390744 24.99992877 1.271625604 1.05413059 0.300629966 0.133416556 231.4265136 646330.8845 0.074258354 0.036496654 1.70E-08 7.770390744 -0.217495014 QSS(ph)TDSSGGHPGPR ddPTM_A459_MK2206_30min_R1 2 QSSTDSSGGHPGPR 14 0 Q9GZV5;C9JR84;C9J038;C9JQS8 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 1 QS(0.002)S(0.98)T(0.012)DS(0.005)S(0.002)GGHPGPR;QS(0.141)S(0.429)T(0.429)DS(0.002)SGGHPGPR 129.17 0.0010748 1004770 281.77 250.722 122.674 435.89 373.17 421.16 669.51 442.99 0 63.117 TRUE FALSE 257.8039819 234.3999522 114.3472307 469.4623233 358.3058487 445.0057152 624.8482095 439.1169851 0 70.93641047 3.634296973 3.304367259 1.611968098 6.618072725 5.051085139 6.273304672 8.8085682 6.190290462 0 1 6.148454424 -5.760909777 24.99999879 5.297800485 2.895626465 0.097150393 2.54511097 27.05926105 1277192.833 0.707669001 1.136561401 1.73E-06 5.760909777 -2.40217402 QSS(ph)TDSSGGHPGPR ddPTM_A459_MK2206_30min_R2 2 QSSTDSSGGHPGPR 14 0 Q9GZV5;C9JR84;C9J038;C9JQS8 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 1 QS(0.066)S(0.467)T(0.467)DS(0.001)SGGHPGPR;QS(0.096)S(0.668)T(0.206)DS(0.029)SGGHPGPR 152.59 0.00025109 3830300 1843.11 4230 3578.96 3825.1 5254.1 7895 4458.3 8035.3 8237.3 4067.1 TRUE FALSE 1984.219919 4019.944351 3698.28074 3512.577094 5047.797634 8195.449757 3872.919855 9085.541299 8953.765464 3934.39086 0.504327096 1.021745041 0.939988138 0.892788037 1.282993432 2.083028873 0.984375979 2.309262507 2.275769181 1 11.94192457 -6.49107819 3.200296467 1.766520344 0.862061054 0.460943149 0.450868152 0.229431313 4.779463048 0.150950208 0.16400728 3.23E-07 6.49107819 -0.904459291 QSS(ph)TPSAPELGQQPDVNISEWK ddPTM_A459_MK2206_30min_R1 2 QSSTPSAPELGQQPDVNISEWK 22 0 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 QS(0.288)S(0.531)T(0.177)PS(0.004)APELGQQPDVNISEWK;QS(0.312)S(0.538)T(0.147)PS(0.002)APELGQQPDVNISEWK 171.89 2.99E-12 13453800 3926 4129.6 4216.8 3479.73 3653.8 3290.4 4295.4 3959.4 3594.6 3402.7 TRUE FALSE 3592.073084 3860.762289 3930.575365 3747.739408 3508.261409 3476.699604 4008.861703 3924.783383 3968.271533 3824.252165 0.939287717 1.009546997 1.027802351 0.979992753 0.917371883 0.909118817 1.04827337 1.026287811 1.037659485 1 11.90096194 -7.28791208 24.98884258 1.030245822 0.96745797 0.418935633 0.036859356 888.0250941 838245.0309 0.017287771 0.011659363 5.15E-08 7.28791208 -0.062787852 QSS(ph)TPSAPELGQQPDVNISEWK ddPTM_A459_MK2206_30min_R2 1 QSSTPSAPELGQQPDVNISEWK 22 0 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 QS(0.304)S(0.511)T(0.18)PS(0.005)APELGQQPDVNISEWK 136.16 1.06E-05 2697000 20348 21901 17860 21967 19494 16702 19193 15518 16662 20029 TRUE FALSE 21905.85852 20813.42819 18455.44349 20172.22583 18728.56761 17337.60631 16672.93605 17546.25588 18111.23064 19375.45537 1.130598384 1.074216208 0.952516632 1.04112267 0.966613029 0.894823166 0.86051841 0.905591923 0.934751225 1 14.2419426 -4.805499871 0.604900714 0.913607866 1.269810897 0.668329653 0.046640752 2.117089462 0.599056097 0.024752448 0.526945459 1.56E-05 4.805499871 0.356203031 QSS(ph)VSSTASVNLGDPGSTR ddPTM_A459_MK2206_30min_R2 2 QSSVSSTASVNLGDPGSTR 19 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 QS(0.104)S(0.836)VS(0.055)S(0.004)TASVNLGDPGSTR;QS(0.001)S(0.998)VS(0.001)STASVNLGDPGSTR 269.98 3.02E-112 0 13577.3 11542.4 9894.3 12871.8 10860.4 15197.2 15886.2 9722 17039 17170.2 TRUE FALSE 14616.78853 10969.2212 10224.17102 11820.13277 10433.96613 15775.5401 13800.32286 10992.69878 18521.02142 16609.93778 0.880002606 0.660401101 0.615545414 0.711630165 0.628176111 0.949765153 0.830847354 0.661814567 1.115056641 1 14.01975905 -7.985709274 0.705395773 1.029817105 0.706017634 0.405626192 0.128705411 0.684914508 0.7033359 0.122178628 0.05535398 1.03E-08 7.985709274 -0.323799472 QSSFEPEFVIS(ph)PRPK ddPTM_A459_MK2206_30min_R2 1 QSSFEPEFVISPRPK 15 1 Q9H9A7;A0A0A0MSU3 Q9H9A7 RMI1 RecQ-mediated genome instability protein 1 1 QSSFEPEFVIS(1)PRPK 71.842 0.026233 18146000 20695 24371 21655 21804 23190 20459 25853 17576 16057 27471 TRUE FALSE 22279.42511 23160.77158 22376.96689 20022.54345 22279.44408 21237.58158 22458.47004 19873.24355 17453.60884 26574.62352 0.838372182 0.871537148 0.842042668 0.753445987 0.838372896 0.799167731 0.845109622 0.747827849 0.656777276 1 14.69776163 -5.548533418 20.17026343 0.79800251 0.855413508 0.05309057 0.083457125 62.41362112 49069.30426 0.021798061 0.037763124 2.83E-06 5.548533418 0.057410998 QSSGASS(ph)SSFSSSR ddPTM_A459_MK2206_30min_R1 1 QSSGASSSSFSSSR 14 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;F6S8Q4;A0A0D9SFB3;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 QS(0.012)S(0.135)GAS(0.04)S(0.404)S(0.404)S(0.004)FSSSR 201.72 5.53E-05 3467700 1066.5 992.81 719.75 755.33 1062.9 674.41 920 732.66 730.05 620.75 TRUE FALSE 975.7885746 928.1778885 670.8953753 813.5056475 1020.562442 712.5945114 858.6284786 726.2544309 805.94131 697.6531964 1.398672836 1.330428777 0.961645956 1.166060231 1.462850665 1.021416536 1.230738257 1.04099635 1.155217684 1 9.44636624 -1.522878745 0.120347157 0.958593105 2.082930572 0.254433049 0.144040652 151.1899136 1.254911877 1.025601181 28.49848122 0.03 1.522878745 1.124337467 QSSGASSSS(ph)FSSSR ddPTM_A459_MK2206_30min_R1 2 QSSGASSSSFSSSR 14 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;F6S8Q4;A0A0D9SFB3;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 QSSGAS(0.071)S(0.071)S(0.024)S(0.834)FSSSR;QSSGAS(0.056)S(0.075)S(0.031)S(0.838)FSSSR 212.43 6.09E-07 9090500 5303.5 4306.9 5185.1 5081.2 4984.3 4891.5 5807.5 5991.2 4539.1 4672.4 TRUE FALSE 4852.409475 4026.520027 4833.149859 5472.554904 4785.764777 5168.452503 5420.092271 5938.81957 5010.955688 5251.252187 0.924048075 0.766773311 0.920380451 1.042142847 0.911356874 0.984232392 1.032152347 1.130933987 0.954240153 1 12.35844577 -5.546662782 4.864228919 1.008507731 0.843835492 0.50599063 0.064997507 0.140258213 8.596188499 0.018005866 0.033622595 2.84E-06 5.546662782 -0.164672239 QSSGASSSS(ph)FSSSR ddPTM_A459_MK2206_30min_R2 3 QSSGASSSSFSSSR 14 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;F6S8Q4;A0A0D9SFB3;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 QSSGAS(0.005)S(0.005)S(0.005)S(0.986)FSSSR;QSSGAS(0.071)S(0.071)S(0.024)S(0.834)FSSSR;QSSGAS(0.003)S(0.025)S(0.082)S(0.89)FSSSR 217.79 1.14E-08 38959500 69787.7 104575 77315 70643.5 73247.8 102082.6 101813.5 73125.4 82467.2 77563 TRUE FALSE 75130.69997 99381.95757 79892.64351 64871.70007 70371.72333 105967.4249 88445.26515 82683.14086 89640.04799 75032.12566 1.001313761 1.324525417 1.064779157 0.864585662 0.937887907 1.412294053 1.178765287 1.101969858 1.194688904 1 16.19522081 -6.715085539 24.99999976 1.183996116 1.046287148 0.180085616 0.147442163 241.5554259 130277.1023 0.051436728 0.051436578 1.93E-07 6.715085539 -0.137708968 QSSGPSS(ph)SPAAAAAPEKPGPK ddPTM_A459_MK2206_30min_R1 1 QSSGPSSSPAAAAAPEKPGPK 21 1 Q9UDT6-2;Q9UDT6 Q9UDT6-2 CLIP2 CAP-Gly domain-containing linker protein 2 1 QS(0.064)S(0.044)GPS(0.044)S(0.424)S(0.424)PAAAAAPEKPGPK 78.122 0.0013558 6397800 2746.7 2455 2281.6 2042.9 2462.8 1867.8 2065.2 2086.3 2062.1 2001 TRUE FALSE 2513.078742 2295.179054 2126.731349 2200.244512 2364.701461 1973.553222 1927.434276 2068.059699 2276.462674 2248.898987 1.117470707 1.020578989 0.94567669 0.978365202 1.051492964 0.877564192 0.857056848 0.919587634 1.012256525 1 11.13500315 -6.75754841 24.99972742 0.923502504 1.015854143 0.335275971 0.061821122 122.1970893 785124.6358 0.021814396 0.021041389 1.75E-07 6.75754841 0.092351639 QSSGPSS(ph)SPAAAAAPEKPGPK ddPTM_A459_MK2206_30min_R2 2 QSSGPSSSPAAAAAPEKPGPK 21 1 Q9UDT6-2;Q9UDT6 Q9UDT6-2 CLIP2 CAP-Gly domain-containing linker protein 2 1 QS(0.016)S(0.011)GPS(0.143)S(0.441)S(0.389)PAAAAAPEKPGPK;QS(0.003)S(0.002)GPS(0.127)S(0.434)S(0.434)PAAAAAPEKPGPK 99.569 0.00016327 24615000 71211 70039 66936 72000 74881 54373 87585 58063 57789 83194 TRUE FALSE 76662.96891 66560.96511 69167.61283 66117.36968 71940.79569 56442.20262 76084.98429 65652.03346 62815.38276 80479.38659 0.952578942 0.827056069 0.85944508 0.821544155 0.89390338 0.70132496 0.94539717 0.815762101 0.780515178 1 16.29633169 -11.23212549 2.70550558 1.025666538 0.842853353 0.300693378 0.07126727 185988817.4 155799795.9 32435007.41 0.017243236 5.86E-12 11.23212549 -0.182813185 QSSGS(ph)ATNVASTPDNR ddPTM_A459_MK2206_30min_R1 2 QSSGSATNVASTPDNR 16 0 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 QS(0.004)S(0.056)GS(0.86)AT(0.079)NVASTPDNR;QS(0.072)S(0.033)GS(0.539)AT(0.342)NVAS(0.006)T(0.008)PDNR 187.04 6.64E-14 0 1222.99 839.69 1171.03 919.84 1611.68 1473.91 1707.67 1358.92 783.95 1066.64 TRUE FALSE 1118.968278 785.0260284 1091.543746 990.6862362 1547.483373 1557.36151 1593.75445 1347.039106 865.4444079 1198.783416 0.933419885 0.654852259 0.910542915 0.826409694 1.290878196 1.299118331 1.329476558 1.123671789 0.721935586 1 10.22735532 -6.244362265 23.29588163 1.152375389 0.824362004 0.38548602 0.181510459 345.1316602 470812.6942 0.056069583 0.072139462 5.70E-07 6.244362265 -0.328013386 QSSGS(ph)ATNVASTPDNR ddPTM_A459_MK2206_30min_R2 2 QSSGSATNVASTPDNR 16 0 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 QS(0.108)S(0.007)GS(0.776)AT(0.108)NVASTPDNR;QS(0.049)S(0.106)GS(0.76)AT(0.081)NVAS(0.002)T(0.002)PDNR 181.64 9.57E-07 6451600 9383.1 20645.9 14004.9 27469 19432.8 29023.3 21317.2 16106.3 22618.7 15197.7 TRUE FALSE 10101.47735 19620.65463 14471.81638 25224.69483 18669.77063 30127.80202 18518.22603 18211.44871 24586.03364 14701.80029 0.687091183 1.334574966 0.984356751 1.715755508 1.269896901 2.049259371 1.259589007 1.238722357 1.672314489 1 13.84370521 -4.48237881 1.015960059 1.458795817 3.21E-10 0.309957487 0.315351086 3.777777892 2.102965659 0.097787416 6.92952839 3.29E-05 4.48237881 -1.458795816 QSSLAEPVS(ph)PSK ddPTM_A459_MK2206_30min_R1 2 QSSLAEPVSPSK 12 0 O43572;E7EMD6 O43572 AKAP10 "A-kinase anchor protein 10, mitochondrial" 1 QSSLAEPVS(0.765)PS(0.235)K;QSSLAEPVS(0.99)PS(0.01)K 196.18 0.00016178 48047000 11809.7 12877.4 13006.8 9854.6 9644.1 8639.1 11328.2 9548.8 11852.1 11325 TRUE FALSE 10805.223 12039.07892 12123.93466 10613.603 9259.955075 9128.238376 10572.51645 9465.315848 13084.16821 12728.0265 0.848931529 0.94587161 0.952538452 0.833876564 0.727524811 0.717176255 0.830648526 0.743659345 1.027980906 1 13.63572112 -5.851604855 6.3760091 0.818279025 0.918338966 0.075481388 0.103926457 0.386825571 22.41050424 0.028908573 0.043400398 1.41E-06 5.851604855 0.100059941 QSSLAEPVS(ph)PSK ddPTM_A459_MK2206_30min_R2 3 QSSLAEPVSPSK 12 0 O43572;E7EMD6 O43572 AKAP10 "A-kinase anchor protein 10, mitochondrial" 1 QSSLAEPVS(0.528)PS(0.472)K;QSSLAEPVS(0.955)PS(0.045)K;QSSLAEPVS(0.623)PS(0.377)K 178.47 0.00010377 180382000 505281 509128 486109 453750 439560 346703 484272 368066 316677 474029 TRUE FALSE 543965.7019 483845.4439 502315.6314 416677.1735 422300.6658 359897.0256 420686.5047 416173.49 344220.993 458561.4726 1.186243796 1.055137583 1.095416125 0.908661539 0.920924873 0.784839214 0.917404819 0.90756314 0.750653977 1 18.80675562 -5.740575774 1.591431437 0.869669431 1.133555637 0.669055197 0.073418033 0.222068328 1.136437712 0.022452015 0.050891107 1.82E-06 5.740575774 0.263886206 QSSLAEPVS(ph)PSKK ddPTM_A459_MK2206_30min_R1 1 QSSLAEPVSPSKK 13 1 O43572;E7EMD6 O43572 AKAP10 "A-kinase anchor protein 10, mitochondrial" 1 QSS(0.002)LAEPVS(0.814)PS(0.185)KK 182.7 3.10E-14 0 2895.2 3366.3 3096.7 2374 2045.1 1667.1 2400.5 2495.9 2584.9 3306.9 TRUE FALSE 2648.948037 3147.153258 2886.504632 2556.845891 1963.639336 1761.489761 2240.367025 2474.078609 2853.609605 3716.583738 0.712737348 0.846786587 0.776655347 0.687955949 0.528345243 0.473954009 0.602802784 0.665686228 0.767804469 1 11.8597614 -8.649466297 2.352201394 0.999553888 0.660081886 0.495894138 0.103650995 0.499023401 5.753131995 0.117709968 0.032037393 2.24E-09 8.649466297 -0.339472002 QSSLAEPVSPS(ph)K ddPTM_A459_MK2206_30min_R1 1 QSSLAEPVSPSK 12 0 O43572;E7EMD6 O43572 AKAP10 "A-kinase anchor protein 10, mitochondrial" 1 QSSLAEPVS(0.092)PS(0.908)K 176.25 0.00010352 41462000 7330.4 8334.2 8059.2 6104.4 5583.4 4787.2 6675.8 5807.9 7227 6889.2 TRUE FALSE 6706.910987 7791.642065 7512.163958 6574.561946 5361.001355 5058.247127 6230.469563 5757.122143 7978.272512 7742.686107 0.86622535 1.006322865 0.970227109 0.849131923 0.692395543 0.65329358 0.804690966 0.743556185 1.030426961 1 12.91861844 -5.89930873 4.553115147 0.796576309 0.952381235 0.167748674 0.118867138 0.300797366 10.81089237 0.034094262 0.051860653 1.26E-06 5.89930873 0.155804926 QSSLAEPVSPS(ph)K ddPTM_A459_MK2206_30min_R2 1 QSSLAEPVSPSK 12 0 O43572;E7EMD6 O43572 AKAP10 "A-kinase anchor protein 10, mitochondrial" 1 QSSLAEPVS(0.054)PS(0.946)K 144.18 0.0007638 19278000 70052 65508 66086 56393 49677 48670 56576 47929 37404 58113 TRUE FALSE 75415.23498 62254.96798 68289.27426 51785.51151 47726.43137 50522.17095 49147.50324 54193.48486 40657.33231 56216.77757 1.341507611 1.107409045 1.214748999 0.921175381 0.848971311 0.898702721 0.874249741 0.964009095 0.72322417 1 15.77871314 -5.789876883 4.714091044 0.883643142 1.212837181 0.753949977 0.086792551 0.087919975 4.650207091 0.023080852 0.036815811 1.62E-06 5.789876883 0.329194039 QSSLAEPVSPS(ph)KK ddPTM_A459_MK2206_30min_R2 1 QSSLAEPVSPSKK 13 1 O43572;E7EMD6 O43572 AKAP10 "A-kinase anchor protein 10, mitochondrial" 1 QSSLAEPVS(0.005)PS(0.995)KK 78.848 0.020675 32141000 71510 67067 73156 72838 66789 39316 75176 60209 42139 87154 TRUE FALSE 76984.86058 63736.5503 75594.98453 66886.9024 64166.52827 40812.19793 65305.3009 68078.52303 45804.17405 84310.17212 0.913114736 0.755976992 0.896629465 0.793343208 0.761076946 0.484072051 0.774583888 0.807476978 0.543281705 1 16.36341908 -6.232858008 3.104376069 0.706953556 0.84308059 0.13221828 0.139649016 0.473736797 9.298920117 0.042621365 0.054254977 5.85E-07 6.232858008 0.136127033 QSST(ph)DSSGGHPGPR ddPTM_A459_MK2206_30min_R1 1 QSSTDSSGGHPGPR 14 0 Q9GZV5;C9JR84;C9J038;C9JQS8 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 1 QS(0.243)S(0.243)T(0.509)DS(0.005)SGGHPGPR 144.17 0.00072116 765790 227.63 233.89 165.73 57.979 307.64 160.47 255.28 217.06 0 0 TRUE FALSE 208.2688732 218.6637185 154.4807094 62.44455263 295.3860474 169.5556727 238.250737 215.1622673 0 0 0 QSSTAT(ph)SPTPSSDR ddPTM_A459_MK2206_30min_R1 2 QSSTATSPTPSSDR 14 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 QSST(0.001)AT(0.774)S(0.225)PT(0.001)PSSDR;QSST(0.004)AT(0.317)S(0.317)PT(0.317)PS(0.043)S(0.003)DR 233.28 2.98E-13 6691750 1902.02 1907.41 1967.95 1556.07 1857.74 1987.97 1792.51 2066.16 1378.18 1740.05 TRUE FALSE 1740.243211 1783.237262 1834.371037 1675.918781 1783.742282 2100.527143 1672.934929 2048.095781 1521.446743 1955.620531 0.88986753 0.911852394 0.937999478 0.856975448 0.912110634 1.07409751 0.855449665 1.047286909 0.77798669 1 10.93341074 -6.544829343 24.99955063 0.952967041 0.900563838 0.081449892 0.083337811 610.623256 695434.3275 0.025649786 0.025651786 2.85E-07 6.544829343 -0.052403203 QSSTATS(ph)PTPSSDR ddPTM_A459_MK2206_30min_R2 1 QSSTATSPTPSSDR 14 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 QS(0.003)S(0.001)T(0.004)AT(0.436)S(0.553)PT(0.003)PSSDR 152.11 0.00038894 5605900 10785 12783 12490 12006 11928 14639 12154 8674.5 11706 9798 TRUE FALSE 11610.70789 12148.21481 12906.41037 11025.07139 11459.64679 15196.0974 10558.1652 9808.286934 12724.16672 9478.292062 1.224978911 1.28168817 1.361681016 1.163191778 1.209041324 1.603252707 1.113931195 1.034815858 1.342453539 1 13.2104114 -9.010091902 0.498358736 0.990841455 1.287860116 0.215705385 0.148520013 3.068285155 1.399421109 0.25081949 0.080785428 9.77E-10 9.010091902 0.297018661 QSSTATSPTPS(ph)SDR ddPTM_A459_MK2206_30min_R1 1 QSSTATSPTPSSDR 14 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 QSSTAT(0.021)S(0.021)PT(0.4)PS(0.548)S(0.009)DR 142.95 0.00054195 2976700 1361.8 1312.6 1291.6 1057 1342.7 1554.5 1569.3 1553.6 1045.7 1160.7 TRUE FALSE 1245.971759 1227.149501 1203.929791 1138.410323 1289.217416 1642.514447 1464.61486 1540.017039 1154.404257 1304.496279 0.955136307 0.940707552 0.9229078 0.872681925 0.988287538 1.259117771 1.122743609 1.180545368 0.884942545 1 10.34927711 -6.533596732 24.80694985 1.105152374 0.924930333 0.396139183 0.096510931 183.0053987 423565.6239 0.031268532 0.031297395 2.93E-07 6.533596732 -0.180222041 QSSTATSPTPS(ph)SDR ddPTM_A459_MK2206_30min_R2 1 QSSTATSPTPSSDR 14 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 QSST(0.001)AT(0.253)S(0.253)PT(0.141)PS(0.307)S(0.044)DR 125.33 0.0013881 4935200 11745 10379 13459 13248 13992 15270 13086 9051.2 13710 12948 TRUE FALSE 12644.20623 9863.593952 13907.71634 12165.59602 13442.60378 15851.11055 11367.79248 10234.22292 14902.47102 12525.50782 1.009476535 0.787480563 1.110351496 0.971265692 1.073218265 1.265506419 0.907571385 0.817070498 1.189769807 1 13.61258148 -5.271158267 24.9664019 1.037103318 0.898478542 0.155450202 0.133300395 1149.392002 2952624.321 0.035424392 0.075218388 5.36E-06 5.271158267 -0.138624776 QSSTPGSLFLS(ph)PPAPAPK ddPTM_A459_MK2206_30min_R2 2 QSSTPGSLFLSPPAPAPK 18 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 QS(0.001)S(0.003)T(0.018)PGS(0.112)LFLS(0.866)PPAPAPK;QSST(0.004)PGS(0.007)LFLS(0.989)PPAPAPK 142.27 0.00030284 10958300 82147 94701 85603 98918 88627 84718 115700 79843 72174 107084 TRUE FALSE 88436.23748 89998.28605 88456.9613 90836.08298 85147.05867 87942.00285 100508.451 90278.75424 78451.56406 103589.8578 0.853715212 0.868794377 0.853915269 0.876882012 0.821963274 0.848944141 0.970253779 0.871501864 0.75732862 1 16.66052323 QSSTPS(ph)APELGQQPDVNISEWK ddPTM_A459_MK2206_30min_R2 1 QSSTPSAPELGQQPDVNISEWK 22 0 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 QS(0.102)S(0.161)T(0.048)PS(0.689)APELGQQPDVNISEWK 146.72 2.75E-07 3915600 28034 30424 22425 26267 24230 25438 31837 20925 22226 26480 TRUE FALSE 30180.30459 28913.1884 23172.63831 24120.90208 23278.60845 26406.06092 27656.76366 23659.96935 24159.1773 25615.95977 1.178183635 1.128717747 0.90461722 0.941635695 0.9087541 1.030844097 1.079669234 0.923641728 0.943129889 1 14.64475533 -5.140976568 5.028227906 0.967566417 1.165776422 0.663472611 0.053595829 0.136150618 4.938570288 0.014910136 0.042479114 7.23E-06 5.140976568 0.198210005 QSSVTQVTEQS(ph)PK ddPTM_A459_MK2206_30min_R1 3 QSSVTQVTEQSPK 13 0 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;C9JWN0 Q14966-3 ZNF638 Zinc finger protein 638 1 QSSVTQVT(0.01)EQS(0.99)PK;QSSVTQVTEQS(1)PK;QSSVTQVTEQS(1)PK 254.94 1.61E-23 20264800 7518.9 9910 8774.4 8008.4 5324.2 4701.8 6164.1 5631.6 6717.3 6608.4 TRUE FALSE 6879.378072 9264.857199 8178.818175 8625.208356 5112.12584 4968.011853 5752.904136 5582.363515 7415.587373 7427.098483 0.926253784 1.247439659 1.101213104 1.161316007 0.688307264 0.668903457 0.774582988 0.751621044 0.99845012 1 12.85858299 -6.254886289 24.98246772 0.792035104 1.118380045 0.549067869 0.130162363 360.3879658 1373912.873 0.03812067 0.0480385 5.56E-07 6.254886289 0.326344941 QSSVTQVTEQS(ph)PK ddPTM_A459_MK2206_30min_R2 3 QSSVTQVTEQSPK 13 0 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;C9JWN0 Q14966-3 ZNF638 Zinc finger protein 638 1 QSSVTQVTEQS(1)PK;QSSVTQVTEQS(1)PK;QSSVTQVTEQS(1)PK 257.16 1.58E-29 49322600 208857 177519 171073 146462 141297 121305 201016 142189 112513 217277 TRUE FALSE 224847.2525 168703.6646 176776.4884 134495.5861 135748.9698 125921.3468 174622.3577 160773.5905 122299.1774 210187.2693 1.069747246 0.802635027 0.841042795 0.639884549 0.645847726 0.599091216 0.830794169 0.764906414 0.581858158 1 17.68131576 -4.277454928 1.164931123 0.715713742 1.743388392 0.394799539 0.122747681 4.224520538 2.158292257 0.035799925 7.030491922 5.28E-05 4.277454928 1.02767465 QSTLYSFFPKS(ph)PALSDANK ddPTM_A459_MK2206_30min_R2 1 QSTLYSFFPKSPALSDANK 19 1 P52701-2;P52701;P52701-3;A0A087WWJ1;F8WAX8;F8W7G9 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 QSTLYS(0.001)FFPKS(0.937)PALS(0.062)DANK 86.573 0.0019503 18024000 23461 52287 27273 46131 62644 46972 50070 25592 46980 34543 TRUE FALSE 25257.1922 49690.50361 28182.26821 42361.94973 60184.2818 48759.55237 43495.74886 28936.96227 51066.23548 33415.86474 0.755844339 1.4870333 0.843379886 1.267719691 1.801069111 1.459173741 1.301649656 0.865964789 1.528203321 1 15.02824559 -4.747630956 24.81152941 1.287548031 0.755842876 0.227963 0.291403912 1031.027458 1852473.775 0.07414787 1.4632607 1.79E-05 4.747630956 -0.531705156 QSVDKVT(ph)SPTKV ddPTM_A459_MK2206_30min_R1 1 QSVDKVTSPTKV 12 2 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 QSVDKVT(0.449)S(0.449)PT(0.103)KV 156.08 0.0084244 60829000 6379.5 7695.5 8117.7 6584.2 5611.4 4850.6 4820.3 7206.3 5567.1 3744.4 TRUE FALSE 5836.890025 7194.521551 7566.693141 7091.316225 5387.886056 5125.23678 4498.746582 7143.296079 6145.819967 4208.284541 1.38699985 1.709609101 1.79804694 1.685084779 1.2803046 1.217892167 1.069021483 1.697436571 1.460409796 1 12.03901654 -6.261135885 24.99969824 1.307977195 1.660491302 0.412074057 0.207961946 29.81770241 2456139.878 0.065525699 0.079426237 5.48E-07 6.261135885 0.352514107 QSVDKVT(ph)SPTKV ddPTM_A459_MK2206_30min_R2 1 QSVDKVTSPTKV 12 2 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 QSVDKVT(0.5)S(0.5)PTKV 155.14 0.0082546 36122000 48733 74364 70634 59091 77779 46260 75698 52381 58835 61480 TRUE FALSE 52464.03595 70671.1919 72988.90231 54263.07628 74725.00565 48020.45672 65758.76167 59227.37655 63952.36195 59473.91263 0.882135269 1.188272114 1.227242316 0.912384504 1.256433322 0.807420507 1.105674047 0.995854719 1.075301071 1 15.85996937 -6.74739892 24.99999738 1.003392423 1.095961119 0.110573928 0.136027593 573.1675498 1020562.441 0.043160381 0.042954108 1.79E-07 6.74739892 0.092568696 QSVDKVTS(ph)PTKV ddPTM_A459_MK2206_30min_R1 1 QSVDKVTSPTKV 12 2 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 QSVDKVT(0.084)S(0.892)PT(0.024)KV 179.83 0.0033939 50950000 7991.8 8452.5 8680.5 7777.4 7224.9 5340.4 6484.6 7824.8 5925.6 4113.6 TRUE FALSE 7312.055443 7902.240714 8091.291845 8376.416696 6937.116934 5642.768833 6052.024166 7756.388599 6541.587325 4623.223824 1.581592352 1.709249003 1.750140628 1.811812928 1.500493421 1.220526855 1.30904849 1.677701295 1.41494065 1 12.17468349 -6.472460823 4.9850669 1.36448057 1.712485987 0.533240895 0.169229175 0.18562676 10.23814078 0.054912518 0.060907373 3.37E-07 6.472460823 0.348005417 QSVDKVTS(ph)PTKV ddPTM_A459_MK2206_30min_R2 1 QSVDKVTSPTKV 12 2 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 QSVDKVT(0.071)S(0.773)PT(0.155)KV 150.22 0.018134 39164000 44961 68172 59342 58380 75260 44720 69564 48456 53502 51200 TRUE FALSE 48403.24873 64786.67761 61320.43266 53610.16725 72304.91425 46421.85094 60430.16324 54789.36557 58155.50725 49529.34819 0.977263996 1.308046239 1.238062581 1.082391939 1.45983981 0.937259476 1.220087997 1.106200012 1.17416258 1 15.59599601 QSVENDIHGLR ddPTM_A459_MK2206_30min_R1 3 QSVENDIHGLR 11 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 ;; 181.66 5.74E-05 29649600 15102.6 13363.2 15480.1 10257.6 15049.3 20382.6 20989.2 16315.7 19188.8 17409.2 FALSE TRUE 13818.04456 12493.25325 14429.35394 11047.64213 14449.85451 21536.6452 19589.04876 16173.05356 21183.54443 19565.98313 0.706227971 0.638519065 0.73747145 0.564635166 0.738519216 1.100718786 1.001178864 0.826590386 1.08267212 1 14.25605998 -6.632069586 5.513825721 0.989962133 0.664079781 0.801436136 0.081406452 0.092245369 4.137959865 0.026860468 0.02679144 2.33E-07 6.632069586 -0.325882352 QSVENDIHGLR ddPTM_A459_MK2206_30min_R2 4 QSVENDIHGLR 11 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 ;;; 166.11 0.00082384 28884600 181410 163077 156893 268082 166385 187471 220436 170050 172093 189132 FALSE TRUE 195298.8891 154978.8333 162123.7343 246178.843 159851.8889 194605.3403 191492.4884 192276.1189 187061.3381 182960.6383 1.06743664 0.847061066 0.88611264 1.345528991 0.873695514 1.063645941 1.046632162 1.050915217 1.022413016 1 17.48117378 QSYVDTS(ph)PAAPVSYADMR ddPTM_A459_MK2206_30min_R2 2 QSYVDTSPAAPVSYADMR 18 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 QSYVDT(0.082)S(0.918)PAAPVSYADMR;QS(0.001)YVDT(0.213)S(0.787)PAAPVSYADMR 223.82 8.40E-15 8300100 38958 48696 41093 48344 50401 43451 49479 42958 52093 44318 TRUE FALSE 41940.65443 46277.82745 42463.02011 44394.14056 48422.0035 45104.55825 42982.34787 48572.7581 56623.95498 42871.90729 0.97827825 1.079444102 0.990462585 1.035506544 1.129457646 1.052077248 1.002576059 1.132974042 1.320770606 1 15.38774498 -7.936972888 5.883217634 1.181577339 1.042725771 0.272224493 0.083640854 0.208178466 13.7409091 0.044531166 0.020780633 1.16E-08 7.936972888 -0.138851568 QT(ph)AGQGSPCEEQEEPR ddPTM_A459_MK2206_30min_R2 1 QTAGQGSPCEEQEEPR 16 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 QT(0.75)AGQGS(0.25)PCEEQEEPR 188.16 2.10E-06 13547000 21810 11909 14418 18640 15706 14320 23007 17646 14219 22066 TRUE FALSE 23479.79037 11317.61638 14898.68892 17117.05237 15089.30352 14864.95763 19986.15326 19952.39279 15455.74292 21345.98823 1.099962678 0.530198755 0.697962014 0.801886153 0.706891776 0.696381797 0.936295525 0.934713941 0.724058439 1 14.38167733 -7.262184076 24.99842807 0.893326475 0.742581281 0.175915246 0.150111312 114.8820335 3856318.37 0.057846107 0.04165447 5.47E-08 7.262184076 -0.150745194 QT(ph)DLELSPLTK ddPTM_A459_MK2206_30min_R1 1 QTDLELSPLTK 11 0 J3KTC5;Q8WVK7 J3KTC5 SKA2 Spindle and kinetochore-associated protein 2 1 QT(0.572)DLELS(0.149)PLT(0.279)K 106.26 0.026248 4522600 3667.3 3517.2 3406.7 3512.6 3442.9 2843.7 3473.8 2976.9 4150 4373.9 TRUE FALSE 3355.376877 3288.229641 3175.462696 3783.141061 3305.762003 3004.707837 3242.06914 2950.873277 4581.407351 4915.771753 0.682573774 0.668914223 0.645974397 0.769592497 0.672480776 0.611238273 0.659523937 0.600286878 0.9319813 1 12.26320222 -8.358660799 4.686557904 0.991899299 0.665599846 0.880717855 0.044656052 0.071558433 2.455838362 0.044509766 0.011700142 4.38E-09 8.358660799 -0.326299453 QT(ph)DLELSPLTK ddPTM_A459_MK2206_30min_R2 1 QTDLELSPLTK 11 0 J3KTC5;Q8WVK7 J3KTC5 SKA2 Spindle and kinetochore-associated protein 2 1 QT(0.643)DLELS(0.283)PLT(0.074)K 98.105 0.043447 3054200 31589 32380 28855 28247 30010 23214 29662 28226 22706 32910 TRUE FALSE 34007.47813 30772.05628 29817.0113 25939.12974 28831.65661 24097.42504 25767.34377 31915.23511 24680.92684 31836.1494 1.068203246 0.966575948 0.936577189 0.814769695 0.905626376 0.756920215 0.809373755 1.002484148 0.775248493 1 14.95837823 -5.020189511 1.373298843 0.861710489 1.099137742 0.369043144 0.081773854 0.861668161 1.996192797 0.023650533 0.252597553 9.55E-06 5.020189511 0.237427253 QT(ph)EPVSPVLK ddPTM_A459_MK2206_30min_R2 1 QTEPVSPVLK 10 0 Q8IYH5-4;Q8IYH5-2;Q8IYH5 Q8IYH5-4 ZZZ3 ZZ-type zinc finger-containing protein 3 1 QT(0.913)EPVS(0.087)PVLK 128.36 0.007321 5617400 58066 50825 53870 64510 49693 60015 69074 56283 43438 71037 TRUE FALSE 62511.57761 48301.10441 55665.99891 59239.32664 47741.80313 62298.91288 60004.50083 63639.38135 47216.15872 68719.06851 0.909668582 0.702877752 0.810051709 0.862050781 0.694738799 0.906573885 0.873185597 0.926080384 0.687089621 1 16.06842286 -6.806382311 24.99998028 0.87362842 0.795173927 0.157204525 0.095400247 260.9997511 145182.0147 0.031947169 0.028174876 1.56E-07 6.806382311 -0.078454493 QT(ph)GIETPNK ddPTM_A459_MK2206_30min_R2 1 QTGIETPNK 9 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 QT(0.718)GIET(0.282)PNK 139.15 0.0056234 33434000 105610 98498 92682 93074 82740 71956 99725 88999 79813 112320 TRUE FALSE 113695.5828 93606.73255 95771.97162 85469.55647 79491.21186 74694.336 86630.98771 100631.4749 86754.99047 108655.0076 1.046390639 0.861504082 0.881431733 0.786614058 0.731592714 0.687444948 0.797303223 0.926155886 0.798444475 1 16.72939514 -4.218721566 1.213802315 0.809614015 1.596487723 0.35809973 0.086978755 5.416628911 2.635785573 0.026462129 7.488932885 6.04E-05 4.218721566 0.786873708 QT(ph)SPDPCPQLPLVPR ddPTM_A459_MK2206_30min_R1 1 QTSPDPCPQLPLVPR 15 0 Q5D1E8;A0A1W2PQC8 Q5D1E8 ZC3H12A Ribonuclease ZC3H12A 1 QT(0.5)S(0.5)PDPCPQLPLVPR 149.3 0.00067337 4481000 780.6 756.2 631.15 630.73 760.88 559.3 728.73 673.69 652.05 566.19 TRUE FALSE 714.2058709 706.9712426 588.3092965 679.3089339 730.5725384 590.9670827 680.1177513 667.7999994 719.8329309 636.3338917 1.122375973 1.11100674 0.924529251 1.067535366 1.148096224 0.928705968 1.068806424 1.049449052 1.131218909 1 9.313640153 QT(ph)SPDPCPQLPLVPR ddPTM_A459_MK2206_30min_R2 2 QTSPDPCPQLPLVPR 15 0 Q5D1E8;A0A1W2PQC8 Q5D1E8 ZC3H12A Ribonuclease ZC3H12A 1 QT(0.884)S(0.116)PDPCPQLPLVPR;QT(0.879)S(0.121)PDPCPQLPLVPR 134.88 0.00096506 8652500 38017 43374 38448 50843 44410 44488 47405 41466 38027 37680 TRUE FALSE 40927.61075 41220.11023 39729.83713 46688.96426 42666.24026 46181.02201 41180.66656 46885.74857 41334.51972 36450.50469 1.122826998 1.130851564 1.089966723 1.280886634 1.170525364 1.266951512 1.129769448 1.286285306 1.133990327 1 15.15365117 -5.725385262 24.99983192 1.194115034 1.116178703 0.106696685 0.08262498 308.5756091 213963.4272 0.020483757 0.035477516 1.88E-06 5.725385262 -0.077936331 QT(ph)SPDPCPQLPLVPRGGGT(ph)PK ddPTM_A459_MK2206_30min_R2 1 QTSPDPCPQLPLVPRGGGTPK 21 1 Q5D1E8;A0A1W2PQC8 Q5D1E8 ZC3H12A Ribonuclease ZC3H12A 2 QT(0.809)S(0.192)PDPCPQLPLVPRGGGT(1)PK 40.432 0.047262 7740300 71053 76649 78215 65607 55573 36016 69492 63581 53723 91085 TRUE FALSE 76492.87231 72842.72212 80822.64906 60246.69823 53390.92479 37386.61412 60367.61693 71891.25501 58395.72943 88112.90391 0.868123384 0.826697554 0.917262347 0.683744328 0.605937637 0.424303507 0.685116643 0.815899282 0.662737543 1 16.42706569 -5.773992649 22.74928792 0.673519608 0.8662947 0.231399323 0.140734389 97.49245877 176678.313 0.040090082 0.060048905 1.68E-06 5.773992649 0.192775092 QTAEESGITNSASSTLLSEYNVTNNSVALRT(ph)PR ddPTM_A459_MK2206_30min_R1 2 QTAEESGITNSASSTLLSEYNVTNNSVALRTPR 33 1 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 QTAEESGITNSASSTLLS(0.056)EY(0.014)NVT(0.056)NNS(0.096)VALRT(0.777)PR;QTAEESGITNSASSTLLS(0.012)EY(0.027)NVT(0.099)NNS(0.099)VALRT(0.763)PR 91.034 1.53E-08 8445200 947.63 1038.61 988.62 809.04 1007.53 984.64 1237.63 1022.37 995.85 1116.72 TRUE FALSE 867.0290923 970.9963002 921.5152289 871.352401 967.3979466 1040.389466 1155.069961 1013.431527 1099.372171 1255.067704 0.690822566 0.773660494 0.734235472 0.694267248 0.770793435 0.82895087 0.920324821 0.8074716 0.875946507 1 10.29354948 -6.807143523 2.200276164 0.885162928 0.727867978 0.709089651 0.050934678 0.181590399 1.80442733 0.019631623 0.017561126 1.56E-07 6.807143523 -0.15729495 QTAEETGLT(ph)PLETSR ddPTM_A459_MK2206_30min_R1 2 QTAEETGLTPLETSR 15 0 Q5T8C6;Q13042-4;Q13042-3;Q13042-2;Q13042 Q5T8C6 CDC16 Cell division cycle protein 16 homolog 1 QTAEET(0.422)GLT(0.578)PLETSR;QTAEET(0.001)GLT(0.999)PLETSR 193.41 7.28E-05 17192000 4054.5 3478.2 3191.3 2949.2 3849.6 3385.1 3437.3 3277.6 2842.3 2560.7 TRUE FALSE 3709.643484 3251.768548 2974.683447 3176.347895 3696.26228 3576.761437 3208.003989 3248.944289 3137.767256 2877.938848 1.288993158 1.129894942 1.033615933 1.10368846 1.284343579 1.242820513 1.114688031 1.128913594 1.090282811 1 11.49082022 -8.466423376 1.172308949 1.002487072 1.169188261 0.329123134 0.077336056 0.659586057 1.981554082 0.080171939 0.025415269 3.42E-09 8.466423376 0.166701189 QTAEETGLT(ph)PLETSR ddPTM_A459_MK2206_30min_R2 2 QTAEETGLTPLETSR 15 0 Q5T8C6;Q13042-4;Q13042-3;Q13042-2;Q13042 Q5T8C6 CDC16 Cell division cycle protein 16 homolog 1 QTAEET(0.001)GLT(0.998)PLETSR;QT(0.001)AEET(0.008)GLT(0.991)PLETSR 196.01 7.67E-05 13710800 43762 46431 43490 53741 50370 50596 44934 30068 37213 38734 TRUE FALSE 47112.45237 44125.30406 44939.93489 49350.18839 48392.22071 52521.46623 39034.11182 33997.99084 40449.71947 37470.11275 1.25733415 1.177613325 1.199354141 1.317054708 1.291488527 1.40168957 1.041739908 0.90733623 1.079519556 1 15.1934527 -7.401264587 5.977589472 0.991513176 1.268286277 0.778082374 0.070042192 0.112410278 5.030323532 0.031287606 0.020831179 3.97E-08 7.401264587 0.276773101 QTAEETGLTPLET(ph)SR ddPTM_A459_MK2206_30min_R2 1 QTAEETGLTPLETSR 15 0 Q5T8C6;Q13042-4;Q13042-3;Q13042-2;Q13042 Q5T8C6 CDC16 Cell division cycle protein 16 homolog 1 QTAEETGLTPLET(0.5)S(0.5)R 118.55 0.0043981 0 8503.3 11997 10616 12830 11090 12407 12008 8817 11160 10852 TRUE FALSE 9154.319186 11401.24643 10969.93214 11781.74796 10654.55088 12879.15708 10431.33518 9969.412173 12130.67663 10497.90013 0.872014315 1.08605019 1.044964422 1.12229568 1.014922103 1.22683174 0.993659213 0.949657746 1.155533628 1 13.35781316 -4.757964086 24.93735166 1.066689853 0.872014033 0.347298116 0.079771484 109.2404107 783741.029 0.019271233 0.137105812 1.75E-05 4.757964086 -0.19467582 QTAGQGS(ph)PCEEQEEPR ddPTM_A459_MK2206_30min_R2 1 QTAGQGSPCEEQEEPR 16 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 QTAGQGS(1)PCEEQEEPR 144.17 0.00038989 5351700 6329.4 7182.4 6091.9 8465.8 6712.8 7486.3 6651.6 5842.7 8517 8445.4 TRUE FALSE 6813.98373 6825.73246 6295.000905 7774.117059 6449.221743 7771.196392 5778.23693 6606.360951 9257.793265 8169.82729 0.834042568 0.835480631 0.770518235 0.951564431 0.789395114 0.951206937 0.707265494 0.808629206 1.133168785 1 12.99608986 -8.254919817 24.98969215 1.0665844 0.831657951 0.600432201 0.076866648 297.8549605 1141698.693 0.052315823 0.018725229 5.56E-09 8.254919817 -0.234926449 QTAGQGS(ph)PCEEQEEPRAPVAPTPPTLIK ddPTM_A459_MK2206_30min_R1 1 QTAGQGSPCEEQEEPRAPVAPTPPTLIK 28 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 QT(0.009)AGQGS(0.655)PCEEQEEPRAPVAPT(0.254)PPT(0.082)LIK 50.505 0.014369 6703100 176.88 315.51 364 268.75 353.03 337.71 324.39 357.84 139.44 243.25 TRUE FALSE 161.8354272 294.9702417 339.2926942 289.4491716 338.9680675 356.8308484 302.750535 354.7114426 153.935287 273.3856464 0.591967535 1.078952921 1.241077206 1.058757749 1.239889775 1.305228906 1.107411962 1.297476467 0.563070114 1 8.094793689 -4.765260382 4.790047094 1.125364441 0.555449876 0.348381087 0.2062047 0.189121764 10.6074702 0.049245545 0.3654719 1.72E-05 4.765260382 -0.569914564 QTAGQGS(ph)PCEEQEEPRAPVAPTPPTLIK ddPTM_A459_MK2206_30min_R2 2 QTAGQGSPCEEQEEPRAPVAPTPPTLIK 28 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 QT(0.068)AGQGS(0.922)PCEEQEEPRAPVAPT(0.008)PPT(0.002)LIK;QT(0.025)AGQGS(0.955)PCEEQEEPRAPVAPT(0.019)PPT(0.001)LIK 54.514 0.0049473 12400300 13812.7 21429 17225.2 22268 22322 23499 22483 19155.3 22061 18749 TRUE FALSE 14870.21093 20364.86702 17799.47957 20448.63317 21445.52612 24393.27091 19530.95509 21658.96348 23979.8259 18137.22167 0.819872592 1.122821753 0.98137851 1.127440219 1.182404147 1.344928753 1.076843822 1.194172067 1.322133364 1 14.14666585 -3.850837912 0.627598605 1.19549233 2.53E-16 0.453777458 0.111201314 8.864951697 1.104316069 0.048738837 9.940212098 0.000140981 3.850837912 -1.19549233 QTDFEHR ddPTM_A459_MK2206_30min_R1 3 QTDFEHR 7 0 Q01813;Q01813-2;B1APP6 Q01813 PFKP "ATP-dependent 6-phosphofructokinase, platelet type" 0 ;; 185.55 3.13E-18 10533200 17725.4 15997.9 15195.3 14301.4 12432.9 12821.1 20351.9 20010.3 2282.32 11672 FALSE TRUE 16217.76165 14956.4338 14163.88537 15402.89631 11937.67127 13547.0196 18994.26189 19835.35206 2519.575331 13118.01548 1.236296883 1.140144546 1.079727753 1.174178848 0.91002113 1.032703432 1.447952392 1.512069572 0.192069855 1 13.67926186 -8.257167368 24.99427875 0.596034934 1.179467055 0.478226738 0.248591447 291.4771551 1705372.634 0.180511988 0.062806516 5.53E-09 8.257167368 0.583432121 QTDFEHR ddPTM_A459_MK2206_30min_R2 4 QTDFEHR 7 0 Q01813;Q01813-2;B1APP6 Q01813 PFKP "ATP-dependent 6-phosphofructokinase, platelet type" 0 ;;; 211.39 3.21E-06 102298000 197830 244140 229202 252231 251926 226442 247741 213191 235577 242034 FALSE TRUE 212976.0169 232016.3626 236843.4803 231622.9205 242034.1194 235059.409 215212.3091 241055.7957 256067.0616 234136.4504 0.909623497 0.990945076 1.011561762 0.989264679 1.033731053 1.003941969 0.919174732 1.029552619 1.093665942 1 17.83699003 -4.748910352 2.976182991 1.00770512 0.88865131 0.348152136 0.041007109 0.546740555 6.482954629 0.010894691 0.163714457 1.78E-05 4.748910352 -0.11905381 QTDLELSPLT(ph)K ddPTM_A459_MK2206_30min_R1 1 QTDLELSPLTK 11 0 J3KTC5;Q8WVK7 J3KTC5 SKA2 Spindle and kinetochore-associated protein 2 1 QT(0.142)DLELS(0.007)PLT(0.851)K 130.2 0.0057054 4663800 3833.8 3779.6 3652.5 2825.5 3099.8 3021.2 3722.9 2933 3002 4197.7 TRUE FALSE 3507.715178 3533.547353 3404.578476 3043.1205 2976.328402 3192.257733 3474.552134 2907.35709 3314.068643 4717.742767 0.743515565 0.748991102 0.721654114 0.645037394 0.630879755 0.676649383 0.736486134 0.616260198 0.702469127 1 12.20388104 -11.17571365 3.863706978 1.014150354 0.689464306 0.804653504 0.045618311 0.006143062 0.000551971 0.048797486 0.011499529 6.67E-12 11.17571365 -0.324686048 QTDPST(ph)PQQESSKPLGGIQPSSQTIQPK ddPTM_A459_MK2206_30min_R2 1 QTDPSTPQQESSKPLGGIQPSSQTIQPK 28 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 QT(0.003)DPS(0.102)T(0.347)PQQES(0.272)S(0.272)KPLGGIQPS(0.001)S(0.001)QT(0.001)IQPK 58.272 0.0081217 13530000 27318 36742 34138 36569 30730 33378 36609 26830 30722 35386 TRUE FALSE 29409.48708 34917.44571 35276.14388 33581.19572 29523.38579 34648.22318 31802.19432 30336.77312 33394.14403 34231.35772 0.859138785 1.020042675 1.030521318 0.98100683 0.862466106 1.012177883 0.929036896 0.886227574 0.975542492 1 15.06303089 QTDPSTPQQES(ph)SKPLGGIQPSSQTIQPK ddPTM_A459_MK2206_30min_R1 2 QTDPSTPQQESSKPLGGIQPSSQTIQPK 28 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 QTDPS(0.013)T(0.065)PQQES(0.792)S(0.13)KPLGGIQPSSQTIQPK;QT(0.001)DPS(0.005)T(0.016)PQQES(0.781)S(0.161)KPLGGIQPS(0.027)S(0.008)QT(0.001)IQPK 131.27 1.61E-12 29205000 3963.3 3893.4 3468.2 3018.3 3471.6 3389.4 3689.7 3018.7 3190.3 2912.8 TRUE FALSE 3626.200523 3639.938952 3232.788247 3250.769989 3333.318821 3581.304899 3443.566845 2992.307824 3521.943102 3273.659655 1.107690141 1.111886798 0.987515071 0.993007928 1.018223998 1.09397594 1.0519013 0.91405587 1.075842779 1 11.67668862 -5.250650523 24.43383785 1.016954775 1.109788492 0.376048906 0.047903582 564.4762656 1278378.01 0.012441848 0.032195714 5.61E-06 5.250650523 0.092833717 QTDPSTPQQES(ph)SKPLGGIQPSSQTIQPK ddPTM_A459_MK2206_30min_R2 2 QTDPSTPQQESSKPLGGIQPSSQTIQPK 28 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 QTDPS(0.002)T(0.024)PQQES(0.71)S(0.263)KPLGGIQPSSQTIQPK;QTDPS(0.003)T(0.01)PQQES(0.494)S(0.494)KPLGGIQPSSQTIQPK 110.36 3.21E-10 49996000 148775 164134 157294 183015 175832 153489 179918 140756 160348 166646 TRUE FALSE 160165.3284 155983.3442 162538.1035 168062.0891 168927.9522 159330.1314 156294.5505 159153.2925 174294.7792 161208.3547 0.993529949 0.967588464 1.008248634 1.042514759 1.04788584 0.988349095 0.969518924 0.987252136 1.081177086 1 17.29856699 -5.38943422 5.806302656 1.015051048 0.980949527 0.162181608 0.032150322 0.435583891 18.53743306 0.0089585 0.018991513 4.08E-06 5.38943422 -0.034101521 QTDPSTPQQESS(ph)KPLGGIQPSSQTIQPK ddPTM_A459_MK2206_30min_R2 1 QTDPSTPQQESSKPLGGIQPSSQTIQPK 28 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 QTDPS(0.029)T(0.101)PQQES(0.355)S(0.514)KPLGGIQPSSQTIQPK 97.124 6.20E-07 10379000 30725 38619 35129 40105 34405 32487 38068 27440 32642 37644 TRUE FALSE 33077.32962 36701.23662 36300.18333 36828.29321 33054.08683 33723.31555 33069.62587 31026.50222 35481.14216 36415.67936 0.908326584 1.007841602 0.996828398 1.011330665 0.90768832 0.926065808 0.908115033 0.85200943 0.974336955 1 15.15227214 -6.269895386 24.90751664 0.919541844 0.984117982 0.225676173 0.046432229 720.3080909 2121695.213 0.013879554 0.016001156 5.37E-07 6.269895386 0.064576138 QTELFAHFIQPS(ph)AQKSPTSPLNMK ddPTM_A459_MK2206_30min_R1 1 QTELFAHFIQPSAQKSPTSPLNMK 24 1 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 QTELFAHFIQPS(0.598)AQKS(0.348)PT(0.049)S(0.005)PLNMK 83.727 5.87E-05 11054000 3080.6 3211.5 3541.8 2962.6 2925.9 2730.3 2939.5 2814.3 2272.5 2177.6 TRUE FALSE 2818.578793 3002.430766 3301.392484 3190.779965 2809.355207 2884.887227 2743.411318 2789.694872 2508.734507 2447.377528 1.151673071 1.226795103 1.348951049 1.303754704 1.147904308 1.178766738 1.120959593 1.139871082 1.0250705 1 11.25702095 -7.610482931 0.670993501 1.003426322 1.255741081 0.680993503 0.05840801 0.454657099 0.400927912 0.05848643 0.03212256 2.45E-08 7.610482931 0.252314759 QTELFAHFIQPSAQKS(ph)PTSPLNMK ddPTM_A459_MK2206_30min_R2 1 QTELFAHFIQPSAQKSPTSPLNMK 24 1 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 QTELFAHFIQPS(0.009)AQKS(0.86)PT(0.065)S(0.065)PLNMK 87.208 3.77E-05 1725400 9449.1 17148 14059 18347 15750 12391 18549 12685 14860 13557 TRUE FALSE 10172.53036 16296.45526 14527.72004 16847.99141 15131.57586 12862.54819 16113.49402 14342.97305 16152.49594 13114.6362 0.775662413 1.242615884 1.107748612 1.284670894 1.153793032 0.980778116 1.228664964 1.093661527 1.231638887 1 13.67889017 -4.752736856 24.99621984 1.15062603 0.775661702 0.564432524 0.097833192 237.3968749 681822.974 0.023136187 0.267708785 1.77E-05 4.752736856 -0.374964328 QTETEMLYGSAPRT(ph)PSK ddPTM_A459_MK2206_30min_R1 1 QTETEMLYGSAPRTPSK 17 1 O43663-3;O43663-2;O43663-4;O43663;G3V3N7;H0YL53 O43663-3 PRC1 Protein regulator of cytokinesis 1 1 QTETEMLYGS(0.414)APRT(0.586)PS(0.001)K 188.54 2.06E-13 0 744.82 737.23 684.7 886.57 1100.9 892.31 609.96 914.26 281.73 133.02 TRUE FALSE 681.4691478 689.236193 638.2244717 954.853775 1057.048822 942.8318211 569.2706813 906.2667212 311.0168417 149.4995218 4.558336638 4.610290284 4.269073665 6.3870022 7.070583295 6.306587536 3.807842823 6.062004146 2.080386866 1 7.22399706 QTGIET(ph)PNK ddPTM_A459_MK2206_30min_R1 2 QTGIETPNK 9 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 QTGIET(1)PNK;QTGIET(1)PNK 122.55 0.013821 35699000 12617.5 13457.8 11835.8 8927.6 10120.8 11178.1 11767.3 8622.3 10899 11656.5 TRUE FALSE 11544.31537 12581.69477 11032.41887 9615.205299 9717.667105 11810.99436 10982.32489 8546.91614 12031.99005 13100.59522 0.881205409 0.960391078 0.842131116 0.733951789 0.741772945 0.901561659 0.838307321 0.652406703 0.918430793 1 13.67734474 -5.439190259 5.745349813 0.810501871 0.918693363 0.111146526 0.097675222 0.381968423 20.30433211 0.024817165 0.052273876 3.64E-06 5.439190259 0.108191492 QTGIET(ph)PNK ddPTM_A459_MK2206_30min_R2 3 QTGIETPNK 9 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 QTGIET(1)PNK;QTGIET(1)PNK;QTGIET(1)PNK 126.12 0.011415 48949200 236351 200254 202661 193851 200276 177566 219308 174825 183974 240894 TRUE FALSE 254446.2143 190309.6776 209417.6166 178012.7532 192412.1579 184323.3986 190512.5962 197675.2278 199975.726 233033.6485 1.091886154 0.816661794 0.898658275 0.763892916 0.825684012 0.79097332 0.817532564 0.848269033 0.858140991 1 17.83017876 -4.758566102 24.99928186 0.837639015 1.091886497 0.576534597 0.062626821 51.56553606 448569.4011 0.01443164 0.097902042 1.74E-05 4.758566102 0.254247482 QTGIETPNKS(ph)GK ddPTM_A459_MK2206_30min_R1 1 QTGIETPNKSGK 12 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 QT(0.001)GIET(0.438)PNKS(0.561)GK 109.07 0.036993 7344300 3912.9 4355.4 3337.5 4175.1 3626.2 3066.2 2466.2 4278.7 2284.2 1673.4 TRUE FALSE 3580.087308 4071.862668 3110.959799 4496.666925 3481.760775 3239.805594 2301.684298 4241.291777 2521.650764 1880.713426 1.903579386 2.165062796 1.654138135 2.390936793 1.851297879 1.722647135 1.223835735 2.255150476 1.340794791 1 10.87706432 -6.767784307 2.93246181 1.554027939 2.018043949 0.322793689 0.35764911 0.352156605 6.230256137 0.126470477 0.117091298 1.71E-07 6.767784307 0.46401601 QTGYGWICQECDSS(ph)SSKEDENEAERK ddPTM_A459_MK2206_30min_R2 1 QTGYGWICQECDSSSSKEDENEAERK 26 2 A0A0U1RRH6;O94880-2 A0A0U1RRH6 PHF14 PHD finger protein 14 1 QTGYGWICQECDS(0.084)S(0.58)S(0.084)S(0.252)KEDENEAERK 51.475 0.010209 9898100 18717 17474 19892 20621 19934 12922 23013 19854 14839 23728 TRUE FALSE 20149.98791 16606.26657 20555.18935 18936.19834 19151.291 13413.75576 19991.36546 22448.98597 16129.6694 22953.7573 0.877851397 0.723466156 0.895504343 0.82497162 0.834342315 0.584381702 0.870940874 0.978009207 0.702702794 1 14.48644271 -10.99058104 5.287223085 1.000289154 0.811415513 0.220399481 0.107046106 0.000363073 3.66E-05 0.103138654 0.024976813 1.02E-11 10.99058104 -0.188873641 QTISPGS(ph)TASK ddPTM_A459_MK2206_30min_R2 1 QTISPGSTASK 11 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4 Q8IVL0-3 NAV3 Neuron navigator 3 1 QT(0.088)IS(0.088)PGS(0.734)T(0.088)AS(0.001)K 102.97 0.013754 3800700 22527 26512 24044 26025 28295 24098 24338 19639 21798 26784 TRUE FALSE 24251.68444 25195.45263 24845.61496 23898.67425 27183.99613 25015.06628 21142.39136 22205.88473 23693.95064 25910.04027 0.935995629 0.972420435 0.958918423 0.922371173 1.049168424 0.96545841 0.815992223 0.857037832 0.91446985 1 14.66122364 -7.142794938 9.95422198 0.885034243 0.969187325 0.2784931 0.054261269 0.436225245 34.20225291 0.020307364 0.015729218 7.20E-08 7.142794938 0.084153082 QTLPISGSQTGSSGVIS(ph)PQELLK ddPTM_A459_MK2206_30min_R2 1 QTLPISGSQTGSSGVISPQELLK 23 0 Q8IZD4;Q8IZD4-2;F5GZK9 Q8IZD4 DCP1B mRNA-decapping enzyme 1B 1 QTLPISGSQTGS(0.005)S(0.018)GVIS(0.977)PQELLK 81.967 0.00030387 2121100 11021 9449 12733 11295 11570 7319.8 12920 11711 8761.9 10918 TRUE FALSE 11864.77623 8979.7764 13157.51186 10372.16237 11115.70367 7598.360118 11223.58848 13241.66791 9523.994224 10561.74655 1.123372557 0.850216993 1.24577046 0.982049921 1.052449385 0.71942269 1.062664061 1.253738465 0.90174425 1 13.36656081 -10.72020139 11.27375739 1.000000822 1.021782036 0.001592749 0.159295483 0 2.00E-10 0.151529866 0.03675139 1.90E-11 10.72020139 0.021781214 QTLPS(ph)SPTTTK ddPTM_A459_MK2206_30min_R1 2 QTLPSSPTTTK 11 0 F8VW64;F8VWX1;F8W659;J3KQU3;P51513-2;P51513 F8VW64 NOVA1 RNA-binding protein Nova-1 1 QT(0.071)LPS(0.534)S(0.278)PT(0.048)T(0.061)T(0.007)K;QT(0.011)LPS(0.463)S(0.463)PT(0.044)T(0.019)TK 87.719 0.031658 10069200 8279.5 7900 8202.2 7350.6 7902.7 6655.2 8023.4 7870.1 6842.7 6923.8 TRUE FALSE 7575.285048 7385.708564 7645.457517 7916.744486 7587.918725 7032.011673 7488.173626 7801.292545 7554.023152 7781.572616 0.973490247 0.949128014 0.982508022 1.017370765 0.975113785 0.903674876 0.962295669 1.002534183 0.970757908 1 12.92584603 -7.747999427 24.81936106 0.989984535 0.966097674 0.141461778 0.028036881 471.0130422 869816.5857 0.014579252 0.008354096 1.79E-08 7.747999427 -0.023886862 QTLPS(ph)SPTTTK ddPTM_A459_MK2206_30min_R2 1 QTLPSSPTTTK 11 0 F8VW64;F8VWX1;F8W659;J3KQU3;P51513-2;P51513 F8VW64 NOVA1 RNA-binding protein Nova-1 1 QTLPS(0.734)S(0.263)PT(0.003)T(0.001)TK 179.67 5.21E-05 21660000 206890 239440 214500 231250 188830 198660 214980 169580 182580 213720 TRUE FALSE 222729.6575 227549.7578 221651.3229 212356.1353 181415.5854 206220.1455 186752.8678 191744.6883 198460.4784 206746.3339 1.077308861 1.10062294 1.072093124 1.02713374 0.877479092 0.997454908 0.903294701 0.927439363 0.9599226 1 17.65750222 -6.010192383 3.752198288 0.941181996 1.083208223 0.746304641 0.036650783 0.10215895 3.16305217 0.010340951 0.014831257 9.77E-07 6.010192383 0.142026227 QTLPSS(ph)PTTTK ddPTM_A459_MK2206_30min_R1 1 QTLPSSPTTTK 11 0 F8VW64;F8VWX1;F8W659;J3KQU3;P51513-2;P51513 F8VW64 NOVA1 RNA-binding protein Nova-1 1 QT(0.004)LPS(0.199)S(0.725)PT(0.055)T(0.015)T(0.002)K 113.54 0.0070392 11465000 3604.7 3497.4 3698.2 3016.7 4117.4 2909.7 3474.6 3287.6 3623.3 2982.4 TRUE FALSE 3298.101336 3269.718624 3447.176488 3249.046757 3953.395239 3074.444699 3242.815774 3258.85686 3999.955001 3351.882228 0.983955017 0.975487324 1.028430074 0.969320082 1.179455294 0.917229333 0.967461132 0.972246827 1.193345926 1 11.71075574 -5.35585125 1.841841677 1.026491323 0.977227247 0.046175588 0.085911166 1.601192602 9.914627449 0.024980839 0.089702283 4.41E-06 5.35585125 -0.049264075 QTLPSS(ph)PTTTK ddPTM_A459_MK2206_30min_R2 1 QTLPSSPTTTK 11 0 F8VW64;F8VWX1;F8W659;J3KQU3;P51513-2;P51513 F8VW64 NOVA1 RNA-binding protein Nova-1 1 QTLPS(0.437)S(0.551)PT(0.009)T(0.002)TK 195.87 2.06E-05 26233000 191850 229150 218250 229040 205850 186740 248000 182560 184200 216030 TRUE FALSE 206538.1835 217770.7442 225526.3461 210326.6993 197767.2947 193846.5216 215437.3021 206421.2188 200221.383 208980.9588 0.988311015 1.042060222 1.079171745 1.006439537 0.946341216 0.927579827 1.030894409 0.987751324 0.958084336 1 17.67301197 -5.999895457 24.99921064 0.975043618 1.038025046 0.40025791 0.033835917 3.838565077 917183.4882 0.009961919 0.014607256 1.00E-06 5.999895457 0.062981427 QTNGCLNGYT(ph)PSR ddPTM_A459_MK2206_30min_R1 2 QTNGCLNGYTPSR 13 0 A0A2R8Y653;Q9BZX2-2;Q9BZX2 A0A2R8Y653 UCK2 Uridine-cytidine kinase 2 1 QTNGCLNGYT(0.944)PS(0.056)R;QTNGCLNGYT(0.981)PS(0.019)R 166.64 0.00076406 13451700 1337.85 1615.86 1196.81 1499.42 1548.98 1397.82 1721.34 1347.76 1347.62 1064.62 TRUE FALSE 1224.058832 1510.66722 1115.573872 1614.905588 1487.280847 1476.96336 1606.512549 1335.976676 1487.709922 1196.513163 1.023021618 1.262557962 0.932354032 1.349676408 1.243012524 1.234389563 1.342661827 1.116558278 1.243371128 1 10.22462055 -4.748366117 24.68229366 1.199762428 1.023021118 0.128048923 0.130439361 1098.664685 2074131.955 0.031172956 0.56155102 1.78E-05 4.748366117 -0.176741309 QTNGCLNGYT(ph)PSR ddPTM_A459_MK2206_30min_R2 3 QTNGCLNGYTPSR 13 0 A0A2R8Y653;Q9BZX2-2;Q9BZX2 A0A2R8Y653 UCK2 Uridine-cytidine kinase 2 1 QTNGCLNGYT(0.99)PS(0.01)R;QTNGCLNGYT(0.974)PS(0.026)R;QTNGCLNGYT(0.987)PS(0.013)R 137.17 0.0024682 19738800 32566.7 32157.7 30359.6 32956.5 40939 34702.2 29162.2 26119.8 25841.6 31869.3 TRUE FALSE 35060.03159 30560.79538 31371.77391 30263.84853 39331.52916 36022.81654 25333.16811 29533.74754 28089.25566 30829.40735 1.137226908 0.991287151 1.017592507 0.981655216 1.275779606 1.168456342 0.821720892 0.95797325 0.911118898 1 14.91201954 -7.257530321 24.97444866 0.919201031 1.090104894 0.449822706 0.093390755 344.5137759 2201062.031 0.039363438 0.029321935 5.53E-08 7.257530321 0.170903863 QTNGCLNGYTPS(ph)R ddPTM_A459_MK2206_30min_R2 1 QTNGCLNGYTPSR 13 0 A0A2R8Y653;Q9BZX2-2;Q9BZX2 A0A2R8Y653 UCK2 Uridine-cytidine kinase 2 1 QTNGCLNGYT(0.375)PS(0.625)R 148.33 0.00054941 7497000 6781.9 7388.5 7204.2 10355 8781.4 7823.1 9758.8 6313.7 7355.1 9284 TRUE FALSE 7301.127478 7021.597834 7444.384432 9508.963376 8436.598113 8120.813552 8477.457838 7138.922268 7994.833303 8981.06384 0.812946841 0.781822506 0.828897842 1.058779176 0.939376255 0.904215102 0.943925796 0.79488604 0.890187782 1 13.13267063 -5.543483067 24.99857585 0.925545818 0.799378491 0.434853789 0.065645364 225.6190634 273735.3575 0.018728993 0.032443466 2.86E-06 5.543483067 -0.126167327 QTNPSAMEVEEDDPVPEIR ddPTM_A459_MK2206_30min_R1 2 QTNPSAMEVEEDDPVPEIR 19 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 223.06 2.27E-17 8207700 786.19 679.49 706.71 656.24 846.95 766.02 683.63 503.4 607.22 615.08 FALSE TRUE 719.3204121 635.2550775 658.7404942 706.7837185 813.2141881 809.3913904 638.0262901 498.9988269 670.342692 691.280754 1.040561896 0.918953802 0.952927577 1.022426437 1.176387717 1.170857695 0.922962612 0.721846839 0.969711204 1 9.43312795 -7.507923769 24.63578709 0.871948361 1.04211923 0.309529811 0.103248238 653.7411199 1076933.611 0.047459164 0.030727082 3.11E-08 7.507923769 0.170170868 QTPMAS(ph)SPRPK ddPTM_A459_MK2206_30min_R1 1 QTPMASSPRPK 11 1 Q5SSJ5;B0QZK4;Q5SWC8;Q5SSJ5-2 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 QTPMAS(0.5)S(0.5)PRPK 137.81 0.0061842 4075000 2427.3 2709.9 2574.1 2181.8 2645.7 2353.4 2479.8 2666.6 2193.8 1909.8 TRUE FALSE 2220.845389 2533.485017 2399.377264 2349.842614 2540.316167 2486.647474 2314.377067 2643.286197 2421.853361 2146.400442 1.034683624 1.180341267 1.117860962 1.094782953 1.183523874 1.158519829 1.078259686 1.231497229 1.128332492 1 11.06770354 -4.745506202 24.65008999 1.136993728 1.034683283 0.171459491 0.061545229 1251.745786 1936438.587 0.014248855 0.35918559 1.80E-05 4.745506202 -0.102310446 QTPMAS(ph)SPRPK ddPTM_A459_MK2206_30min_R2 1 QTPMASSPRPK 11 1 Q5SSJ5;B0QZK4;Q5SWC8;Q5SSJ5-2 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 QTPMAS(0.631)S(0.369)PRPK 65.495 0.044183 17722000 17614 23671 20307 24331 25447 23016 28917 21088 19994 23623 TRUE FALSE 18962.54138 22495.53256 20984.02524 22343.07947 24447.82292 23891.89001 25120.16316 23844.27401 21733.04198 22852.18344 0.829791229 0.984393138 0.918250341 0.977721867 1.069824377 1.045497034 1.099245646 1.043413382 0.951026935 1 14.4800444 -5.969558904 2.907257587 1.040638919 0.917167488 0.535500139 0.051373406 0.206003251 3.5551389 0.015487822 0.023542503 1.07E-06 5.969558904 -0.12347143 QTPMASS(ph)PRPK ddPTM_A459_MK2206_30min_R2 1 QTPMASSPRPK 11 1 Q5SSJ5;B0QZK4;Q5SWC8;Q5SSJ5-2 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 QTPMAS(0.251)S(0.749)PRPK 68.033 0.040208 21870000 36102 39265 36084 38269 36184 28937 44842 38730 35799 41833 TRUE FALSE 38865.99688 37315.1572 37287.02255 35142.30028 34763.23435 30038.21781 38954.19154 43792.14398 38912.73231 40467.99264 0.960413264 0.922090639 0.921395407 0.868397417 0.859030362 0.742271011 0.962592632 1.082142729 0.961568138 1 15.30449367 -7.515560772 24.832854 1.017586819 0.879023821 0.50661407 0.060912386 265.9744629 902569.6728 0.028879673 0.01755184 3.05E-08 7.515560772 -0.138562998 QTPS(ph)PDVVLR ddPTM_A459_MK2206_30min_R1 4 QTPSPDVVLR 10 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46;D6RJ93;Q6NVB9;Q9UPQ0-7;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 QT(0.019)PS(0.981)PDVVLR;QT(0.08)PS(0.92)PDVVLR;QT(0.003)PS(0.997)PDVVLR;QT(0.038)PS(0.962)PDVVLR 141.34 0.0013192 105410000 13637.1 12773 13916.9 11199.2 15087.4 12534.1 13961.5 13046.9 11560.1 11021.2 TRUE FALSE 12477.19303 11941.47538 12972.2596 12061.76432 14486.43691 13243.76991 13030.15381 12932.83233 12761.81376 12386.58946 1.00731465 0.964064839 1.047282599 0.973776063 1.169525878 1.069202297 1.051956541 1.044099538 1.030292786 1 13.59649139 QTPS(ph)PDVVLR ddPTM_A459_MK2206_30min_R2 5 QTPSPDVVLR 10 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46;D6RJ93;Q6NVB9;Q9UPQ0-7;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 QT(0.375)PS(0.625)PDVVLR;QT(0.081)PS(0.919)PDVVLR;QT(0.027)PS(0.973)PDVVLR;QT(0.011)PS(0.989)PDVVLR;QT(0.003)PS(0.997)PDVVLR 141.34 0.0013192 122817500 152575 198766 180695 222648 185425 207676 180047 161669 175132 167101 TRUE FALSE 164256.2593 188895.5695 186719.2811 204456.9462 178144.2828 215579.2557 156406.6126 182799.6934 190364.6648 161648.5081 1.016132232 1.168557457 1.155094367 1.264824208 1.102047182 1.333629727 0.967572262 1.130846771 1.177645665 1 17.30250067 -10.50144045 5.31515771 0.999999445 1.149165341 0.158445591 0.100923716 6.42E-07 1.23E-07 0.094434843 0.022903728 3.15E-11 10.50144045 0.149165896 QTPT(ph)PPTTQLPQQVQPSLPAAPSADQPQQQPR ddPTM_A459_MK2206_30min_R2 1 QTPTPPTTQLPQQVQPSLPAAPSADQPQQQPR 32 0 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 QT(0.107)PT(0.298)PPT(0.298)T(0.298)QLPQQVQPSLPAAPSADQPQQQPR 87.61 3.34E-07 5636800 9520.5 11008 8301.7 11702 12288 12828 11219 9628.7 12574 12479 TRUE FALSE 10249.3968 10461.35873 8578.474535 10745.90917 11805.51138 13316.17853 9745.931824 10887.20415 13667.66379 12071.81125 0.849035541 0.866593961 0.710620333 0.890165439 0.977940355 1.103080412 0.807329706 0.901869978 1.132196611 1 13.55935453 -6.058863285 4.131255547 0.977680036 0.812188306 0.414599823 0.094884539 0.240772679 8.276761087 0.02912699 0.039735195 8.73E-07 6.058863285 -0.16549173 QTPTPPTT(ph)QLPQQVQPSLPAAPSADQPQQQPR ddPTM_A459_MK2206_30min_R2 1 QTPTPPTTQLPQQVQPSLPAAPSADQPQQQPR 32 0 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 QT(0.008)PT(0.026)PPT(0.413)T(0.554)QLPQQVQPSLPAAPSADQPQQQPR 103.34 2.12E-09 7154700 13296 14254 12907 14746 14680 13803 14422 11356 11398 13518 TRUE FALSE 14313.95198 13546.16709 13337.31294 13541.20463 14103.58944 14328.28284 12528.37408 12840.26819 12389.37744 13076.90877 1.094597526 1.035884499 1.019913282 1.035505017 1.078510961 1.095693416 0.958053184 0.981903936 0.947424017 1 13.67473392 -7.272490442 24.96743967 0.970337273 1.056823994 0.716551865 0.027116308 426.7153032 964065.6097 0.011910847 0.008111688 5.34E-08 7.272490442 0.08648672 QTQS(ph)ASSTLQK ddPTM_A459_MK2206_30min_R1 3 QTQSASSTLQK 11 0 G5E948;A0A0D9SEY1;O95819-3;C9J840;A0A0D9SG62;H7C0P6;O95819-2;O95819-5;E7EX83;E7ENQ1;G3XAA2;H7C360;O95819-4;O95819 G5E948 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 QT(0.002)QS(0.996)ASS(0.001)TLQK;QTQS(0.94)AS(0.047)S(0.01)T(0.002)LQK;QT(0.006)QS(0.957)AS(0.017)S(0.005)T(0.016)LQK 197.36 2.01E-05 32230000 9923.5 9473.2 8338.2 6924.1 7872.6 7040.2 7693.5 8206.4 6441.4 6374.3 TRUE FALSE 9079.454215 8856.492958 7772.226216 7457.395382 7559.017671 7438.81004 7180.280653 8134.65231 7111.006581 7163.996408 1.267372804 1.236250335 1.084900909 1.040954651 1.055139791 1.038360381 1.002273067 1.135490842 0.992603315 1 12.8065489 -5.28265653 2.532893059 1.042771554 1.267709547 0.828351424 0.038487454 0.108321785 1.332024416 0.010051023 0.031854881 5.22E-06 5.28265653 0.224937992 QTQS(ph)ASSTLQK ddPTM_A459_MK2206_30min_R2 1 QTQSASSTLQK 11 0 G5E948;A0A0D9SEY1;O95819-3;C9J840;A0A0D9SG62;H7C0P6;O95819-2;O95819-5;E7EX83;E7ENQ1;G3XAA2;H7C360;O95819-4;O95819 G5E948 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 QT(0.016)QS(0.937)AS(0.009)S(0.009)T(0.029)LQK 197.36 2.01E-05 19030000 49550 44862 46955 39765 34579 34167 30679 30242 32015 34172 TRUE FALSE 53343.5861 42634.21832 48520.45626 36516.0723 33221.25471 35467.24913 26650.81045 34194.73324 34799.60683 33056.97044 1.613686475 1.289719468 1.46778291 1.104640619 1.004969732 1.072912873 0.806208497 1.034418242 1.052716155 1 15.01266689 -5.863760231 2.986750505 0.992837314 1.447334209 0.805454588 0.10132993 0.10715081 1.916950077 0.029406515 0.047825029 1.37E-06 5.863760231 0.454496895 QTQSAS(ph)STLQK ddPTM_A459_MK2206_30min_R2 2 QTQSASSTLQK 11 0 G5E948;A0A0D9SEY1;O95819-3;C9J840;A0A0D9SG62;H7C0P6;O95819-2;O95819-5;E7EX83;E7ENQ1;G3XAA2;H7C360;O95819-4;O95819 G5E948 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 QTQS(0.249)AS(0.688)S(0.058)T(0.005)LQK;QTQS(0.149)AS(0.409)S(0.409)T(0.034)LQK 176.99 6.73E-05 32296000 72018 65331 61868 63526 52625 45278 51963 38438 45995 43680 TRUE FALSE 77531.75345 62086.75754 63930.64824 58335.72259 50558.67808 47001.08602 45140.19568 43461.97858 49995.56196 42254.72518 1.834865879 1.469344725 1.512982228 1.380572761 1.196521285 1.112327339 1.068287523 1.02857085 1.183194584 1 15.36682506 -4.64435747 0.416414689 1.021121853 2.420541646 0.914654051 0.073848436 1.65272499 0.206607945 0.058609772 1.182564456 2.27E-05 4.64435747 1.399419793 QTQSESSNYDS(ph)ELEK ddPTM_A459_MK2206_30min_R1 2 QTQSESSNYDSELEK 15 0 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 QTQSES(0.001)S(0.007)NYDS(0.992)ELEK;QTQSESS(0.001)NYDS(0.999)ELEK 284.07 1.49E-55 4029900 2100.2 2274.47 2264.86 1759.44 2240.77 1732.55 1841.23 1750.89 2331.84 2548.17 TRUE FALSE 1921.566961 2126.40159 2111.127613 1894.952374 2151.515386 1830.645484 1718.404906 1735.582153 2574.243113 2863.856537 0.670971795 0.742495848 0.737162489 0.661678526 0.751265071 0.639223879 0.60003177 0.606029712 0.898872929 1 11.48374351 -8.428158852 4.200696729 0.996845818 0.679329379 0.820971975 0.051946051 0.088766946 2.587023132 0.05517762 0.014465357 3.73E-09 8.428158852 -0.317516439 QTQSESSNYDS(ph)ELEK ddPTM_A459_MK2206_30min_R2 2 QTQSESSNYDSELEK 15 0 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 QTQSES(0.001)S(0.014)NYDS(0.985)ELEK;QTQSESS(0.087)NYDS(0.913)ELEK 232.01 4.95E-14 22901000 130436 91484 112060 96635 86764 72568 119038 95227 63257 113727 TRUE FALSE 140422.2804 86941.03759 115796.0245 88739.61138 83357.20941 75329.62609 103408.1676 107673.4959 68758.97952 110016.0973 1.276379402 0.790257423 1.052537104 0.806605702 0.757681934 0.684714582 0.939936701 0.978706739 0.624990171 1 16.74735511 -2.976199737 1.72182229 0.84287275 199.9999377 0.454338143 0.137193421 596.0959636 4.954380572 0.036933582 466258.4748 0.001056332 2.976199737 199.157065 QTQSESSNYDS(ph)ELEKEIK ddPTM_A459_MK2206_30min_R1 1 QTQSESSNYDSELEKEIK 18 1 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 QTQS(0.004)ES(0.014)S(0.014)NY(0.01)DS(0.957)ELEKEIK 57.152 0.033694 4154700 839.48 932.72 969.07 1017.7 679.96 755.21 631.59 839.35 524.81 431.31 TRUE FALSE 768.0778177 871.9997585 903.2922284 1096.08343 652.8757534 797.9693376 589.4577835 832.0116514 579.3658776 484.743939 1.584502159 1.798887388 1.863442027 2.261159639 1.346846656 1.646166715 1.216018883 1.71639413 1.195199838 1 8.92107905 -6.292944882 24.98267834 1.397022854 1.87045028 0.503508008 0.25244822 589.8152674 467699.6755 0.075951998 0.086128773 5.09E-07 6.292944882 0.473427426 QTS(ph)IETDR ddPTM_A459_MK2206_30min_R1 2 QTSIETDR 8 0 E9PFK9;Q9UJ41;Q9UJ41-4;Q9UJ41-3 E9PFK9 RABGEF1 Rab5 GDP/GTP exchange factor 1 QT(0.035)S(0.959)IET(0.005)DR;QT(0.006)S(0.976)IET(0.018)DR 102.05 0.01654 22134000 7814.9 6566.5 7409.5 6603.8 7538 6949.4 6838 6123.3 4777 5230.9 TRUE FALSE 7150.201717 6139.019656 6906.563784 7112.42582 7237.745498 7342.869022 6381.849497 6069.764634 5273.586245 5878.943383 1.216239254 1.044238608 1.174796785 1.209813627 1.231130328 1.249011692 1.085543622 1.032458426 0.897029602 1 12.52134117 -7.718942122 2.232096236 0.955832303 1.182452347 0.710698584 0.060775366 0.178717847 1.771823021 0.041988928 0.018548921 1.91E-08 7.718942122 0.226620043 QTS(ph)PDPCPQLPLVPR ddPTM_A459_MK2206_30min_R2 1 QTSPDPCPQLPLVPR 15 0 Q5D1E8;A0A1W2PQC8 Q5D1E8 ZC3H12A Ribonuclease ZC3H12A 1 QT(0.056)S(0.944)PDPCPQLPLVPR 97.45 0.015756 0 5995.2 9351 6430.2 8918.5 5966 9258.6 8771 7484.3 6701.4 5752.1 TRUE FALSE 6454.197122 8886.642938 6644.579659 8189.830021 5731.744863 9610.942511 7619.357164 8462.523707 7284.275659 5564.409448 1.159906937 1.597050508 1.194121267 1.471823757 1.030072448 1.727216985 1.369302032 1.520830519 1.309083332 1 12.44201287 -8.551311232 20.76511954 0.999999993 1.388452332 0.246948572 0.200387101 1136.096094 829726.7365 0.179926148 0.046456732 2.81E-09 8.551311232 0.388452339 QTSIQSPSSYGNS(ph)SPPLNK ddPTM_A459_MK2206_30min_R2 1 QTSIQSPSSYGNSSPPLNK 19 0 Q9H3D4-8;Q9H3D4-4;Q9H3D4-10;Q9H3D4-7;Q9H3D4-3;Q9H3D4-12;Q9H3D4-2;Q9H3D4-9;Q9H3D4-11;Q9H3D4 Q9H3D4-8 TP63 Tumor protein 63 1 QTSIQSPSSYGNS(0.717)S(0.283)PPLNK 209.19 2.23E-30 0 12063 19441 15012 16667 13814 13134 11717 11362 13000 13165 TRUE FALSE 12986.55255 18475.58821 15512.49259 15305.25278 13271.59295 13633.82357 10178.54383 12847.05241 14130.7165 12735.42713 1.01971865 1.450723876 1.21805829 1.201785588 1.042100341 1.070543095 0.79923066 1.008764942 1.109559684 1 13.63655973 -6.307740071 1.796792554 0.984579455 1.251861052 0.431187287 0.123055613 0.313274134 1.995970557 0.043389687 0.055446475 4.92E-07 6.307740071 0.267281597 QTVPSENIPLPECS(ph)SPPSCKR ddPTM_A459_MK2206_30min_R1 1 QTVPSENIPLPECSSPPSCKR 21 1 Q99728-3;Q99728-2;Q99728;A0A494C142 Q99728-3 BARD1 BRCA1-associated RING domain protein 1 1 QTVPSENIPLPECS(0.493)S(0.493)PPS(0.014)CKR 71.071 0.0029162 3734000 1316.6 1098.6 1078 841.41 1011.1 915.84 969.6 922.52 758.7 662.67 TRUE FALSE 1204.616256 1027.08094 1004.828363 906.215544 970.825746 967.6940693 904.9197531 914.4545049 837.56958 744.7665625 1.617441379 1.379064249 1.349185656 1.216777967 1.303530253 1.299325343 1.215038105 1.227840441 1.124606853 1 9.540644492 -1.522878745 0.154984621 0.995969351 2.96805384 0.832455387 0.063731797 28.55652385 0.28885041 0.218016953 12.75268226 0.03 1.522878745 1.97208449 QTVPSENIPLPECS(ph)SPPSCKR ddPTM_A459_MK2206_30min_R2 1 QTVPSENIPLPECSSPPSCKR 21 1 Q99728-3;Q99728-2;Q99728;A0A494C142 Q99728-3 BARD1 BRCA1-associated RING domain protein 1 1 QT(0.001)VPS(0.047)ENIPLPECS(0.676)S(0.274)PPS(0.002)CKR 65.954 0.0049668 3254300 7970 9118 7478.5 9806.7 9877.6 10375 9717.5 7623.5 10493 7999.4 TRUE FALSE 8580.189328 8665.213379 7727.829457 9005.46124 9489.755793 10769.8279 8441.580577 8619.917625 11405.66217 7738.380233 1.10878363 1.119770949 0.998636565 1.163739823 1.226323275 1.391741885 1.090871775 1.11391756 1.473908212 1 12.9178159 -5.980560586 5.964951668 1.222143407 1.079380858 0.178981165 0.133989122 0.277489367 33.95528187 0.037565781 0.054708664 1.05E-06 5.980560586 -0.142762549 QVAEQGGDLS(ph)PAANR ddPTM_A459_MK2206_30min_R1 4 QVAEQGGDLSPAANR 15 0 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR 226.74 1.12E-13 250974500 11094 11672.2 11571.6 10139.3 12199.9 11336.12 12721.3 11776.5 9734.5 9822.5 TRUE FALSE 10150.39704 10912.33766 10786.15203 10920.23064 11713.95215 11977.96132 11872.68529 11673.5393 10746.43611 11039.38546 0.919471205 0.988491407 0.977060913 0.989206391 1.061105457 1.085020662 1.075484259 1.057444669 0.973463256 1 13.43037224 -6.088128796 3.122026853 1.048677754 0.965235291 0.499479493 0.036294129 0.215807939 4.053166616 0.011454764 0.01587649 8.16E-07 6.088128796 -0.083442463 QVAEQGGDLS(ph)PAANR ddPTM_A459_MK2206_30min_R2 6 QVAEQGGDLSPAANR 15 0 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR 206.13 2.11E-06 455597900 169732 210401 179647 199413 198567 206986 202563 149762 184111 180173 TRUE FALSE 182726.8124 199952.7923 185636.3413 183120.32 190770.2619 214862.9973 175966.2348 169336.4076 200124.642 174293.9698 1.048382871 1.147215779 1.065076099 1.050640594 1.094531624 1.232762083 1.009594509 0.971556319 1.148201755 1 17.41116313 -8.576876858 0.53504366 1.005075716 1.096821788 0.097133357 0.072249364 2.502418336 1.694858856 0.085101256 0.038243385 2.65E-09 8.576876858 0.091746072 QVAGDAPVEQATAET(ph)ASPVHR ddPTM_A459_MK2206_30min_R1 1 QVAGDAPVEQATAETASPVHR 21 0 Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766 RREB1 Ras-responsive element-binding protein 1 1 QVAGDAPVEQATAET(0.635)AS(0.364)PVHR 160.41 1.37E-07 5412500 1344.1 1513.1 1682.6 978.62 1340.2 1543.5 1603 1415.8 1629.9 1339.6 TRUE FALSE 1229.777237 1414.596915 1568.3898 1053.993482 1286.816996 1630.891636 1496.066795 1403.42181 1799.333938 1505.559761 0.816823927 0.939582042 1.041732012 0.700067516 0.854710008 1.083246031 0.993694726 0.932159484 1.195126214 1 10.55608426 -6.754846652 24.99445693 1.033658353 0.874451539 0.400670638 0.103878787 179.9729797 682315.8214 0.035383595 0.03460362 1.76E-07 6.754846652 -0.159206814 QVAGDAPVEQATAETAS(ph)PVHR ddPTM_A459_MK2206_30min_R1 1 QVAGDAPVEQATAETASPVHR 21 0 Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766 RREB1 Ras-responsive element-binding protein 1 1 QVAGDAPVEQAT(0.001)AET(0.346)AS(0.653)PVHR 132.37 3.09E-05 5359400 1055.2 1020.2 1202.2 1110.7 1288.4 1390.7 1132.6 1227.2 1192.8 1017.6 TRUE FALSE 965.4496989 953.7847946 1120.598014 1196.246306 1237.0803 1469.440232 1057.046321 1216.47072 1316.795828 1143.66797 0.84416957 0.833970015 0.979828099 1.045973427 1.08167784 1.284848636 0.924259792 1.063657242 1.151379476 1 10.15945255 -5.494301449 1.842685512 1.087252446 0.828252359 0.535983881 0.088942305 0.284902658 1.859811349 0.026656259 0.076433633 3.20E-06 5.494301449 -0.259000087 QVDLESNPQNRS(ph)PESR ddPTM_A459_MK2206_30min_R2 1 QVDLESNPQNRSPESR 16 1 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 QVDLESNPQNRS(0.968)PES(0.032)R 117.27 0.0010199 7705800 26994 22370 19656 29582 20303 26501 29783 17344 20862 25684 TRUE FALSE 29060.68139 21259.13833 20311.32123 27165.05597 19505.80221 27509.51413 25872.45632 19610.92035 22676.53905 24845.93318 1.169635336 0.855638553 0.817490777 1.093340136 0.785070219 1.1072039 1.04131554 0.789301018 0.912686148 1 14.60072211 -7.748641603 24.99624369 0.888245146 0.971839484 0.068127367 0.131195075 606.9420704 1185466.598 0.061062594 0.034957585 1.78E-08 7.748641603 0.083594339 QVDLESNPQNRS(ph)PESRPSVVYPSTK ddPTM_A459_MK2206_30min_R1 3 QVDLESNPQNRSPESRPSVVYPSTK 25 2 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 QVDLES(0.02)NPQNRS(0.852)PES(0.042)RPS(0.072)VVY(0.011)PS(0.002)T(0.001)K;QVDLES(0.275)NPQNRS(0.724)PES(0.001)RPSVVYPSTK;QVDLES(0.113)NPQNRS(0.763)PES(0.094)RPS(0.017)VVY(0.006)PS(0.004)T(0.004)K 63.63 0.0033699 23509200 3852.1 3137.52 3003.47 2828.42 3578.62 3458.42 3716.8 3696.99 2371.22 2009.73 TRUE FALSE 3524.458667 2933.266878 2799.602825 3046.265398 3436.075988 3654.232752 3468.859054 3664.667606 2617.716804 2258.710525 1.560385285 1.298646659 1.239469509 1.348674549 1.521255579 1.617840228 1.535769642 1.622460057 1.158943023 1 11.14128367 -8.460855534 4.850451655 1.001894434 1.458652337 0.61368656 0.126106341 0.13879855 6.288194511 0.13753192 0.035823625 3.46E-09 8.460855534 0.456757903 QVDLESNPQNRS(ph)PESRPSVVYPSTK ddPTM_A459_MK2206_30min_R2 2 QVDLESNPQNRSPESRPSVVYPSTK 25 2 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 QVDLES(0.017)NPQNRS(0.983)PESRPSVVYPSTK;QVDLES(0.073)NPQNRS(0.908)PES(0.014)RPS(0.003)VVY(0.001)PS(0.001)TK 77.657 0.00028986 19619500 26313 36908 25242 27769 32330 31572 27012 25211 21921.3 20558.5 TRUE FALSE 28327.54351 35075.20239 26083.55568 25500.18387 31060.56175 32773.49458 23465.29195 28506.16426 23827.97505 19887.67783 1.424376629 1.763665054 1.311543555 1.282210225 1.561799322 1.647929681 1.179890994 1.433358108 1.198127567 1 14.27958721 -8.446631404 0.679039606 0.995859615 1.492651429 0.469543496 0.160994638 0.695390625 0.743101525 0.163467774 0.067120668 3.58E-09 8.446631404 0.496791814 QVETEEAGVVTT(ph)ATASVNLKVSPK ddPTM_A459_MK2206_30min_R2 1 QVETEEAGVVTTATASVNLKVSPK 24 1 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 QVETEEAGVVT(0.046)T(0.444)AT(0.052)AS(0.169)VNLKVS(0.288)PK 72.513 0.0012525 6251700 25412 22016 25813 24056 27479 11214 27151 22170 19072 24125 TRUE FALSE 27357.56226 20922.71745 26673.59254 22090.54785 26400.03639 11640.75663 23586.04109 25067.69512 20730.84809 23337.80323 1.172242391 0.896516148 1.142935017 0.946556436 1.131213428 0.498794017 1.010636728 1.074124024 0.88829475 1 14.51038115 QVETEEAGVVTTATAS(ph)VNLKVSPK ddPTM_A459_MK2206_30min_R1 2 QVETEEAGVVTTATASVNLKVSPK 24 1 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 QVETEEAGVVT(0.002)T(0.027)AT(0.008)AS(0.778)VNLKVS(0.186)PK;QVETEEAGVVT(0.073)T(0.061)AT(0.147)AS(0.359)VNLKVS(0.359)PK 93.384 1.27E-05 25622100 2260.3 2813.9 2443.84 2432.15 1649.38 1689.44 1639.7 2012.8 2362.69 2312.51 TRUE FALSE 2068.049616 2630.714599 2277.95895 2619.474614 1583.681702 1785.094633 1530.318605 1995.202302 2608.30008 2599.001197 0.795709374 1.01220215 0.87647476 1.007877417 0.609342429 0.686838711 0.588810273 0.767680409 1.003577868 1 11.34374158 -6.249174126 24.9929517 0.750603919 0.926104857 0.185738561 0.144999818 1116.762132 2275629.823 0.043067746 0.055195058 5.63E-07 6.249174126 0.175500938 QVETEEAGVVTTATASVNLKVS(ph)PK ddPTM_A459_MK2206_30min_R1 6 QVETEEAGVVTTATASVNLKVSPK 24 1 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 QVETEEAGVVTTATAS(0.044)VNLKVS(0.956)PK;QVETEEAGVVTTATASVNLKVS(1)PK;QVETEEAGVVT(0.003)TAT(0.001)AS(0.007)VNLKVS(0.989)PK;QVETEEAGVVT(0.052)T(0.227)AT(0.035)AS(0.151)VNLKVS(0.535)PK;QVETEEAGVVT(0.033)T(0.084)AT(0.055)AS(0.055)VNLKVS(0.773)PK;QVETEEAGVVTTATAS(0.001)VNLKVS(0.999)PK 141.64 1.75E-08 97994100 12016.08 15472.88 13994.36 12836.78 9246.55 8077.4 9592.42 9741.47 13677.97 11136.79 TRUE FALSE 10994.0493 14465.5927 13044.46183 13825.47102 8878.240334 8534.735408 8952.527164 9656.301355 15099.84393 12516.49962 0.878364529 1.155721898 1.042181299 1.10457967 0.709322942 0.681878773 0.715258054 0.77148577 1.206395109 1 13.61154353 -6.252079782 24.60878613 0.821082226 1.052888966 0.24914546 0.16426317 685.0802221 1801250.421 0.049484488 0.062983581 5.60E-07 6.252079782 0.23180674 QVETEEAGVVTTATASVNLKVS(ph)PK ddPTM_A459_MK2206_30min_R2 10 QVETEEAGVVTTATASVNLKVSPK 24 1 O75475-3;O75475-2;O75475 O75475-3 PSIP1 PC4 and SFRS1-interacting protein 1 QVETEEAGVVT(0.078)T(0.078)AT(0.022)AS(0.078)VNLKVS(0.743)PK;QVETEEAGVVTT(0.001)AT(0.001)AS(0.01)VNLKVS(0.987)PK;QVETEEAGVVT(0.002)T(0.002)AT(0.017)AS(0.02)VNLKVS(0.958)PK;QVETEEAGVVT(0.005)T(0.005)AT(0.001)AS(0.013)VNLKVS(0.976)PK;QVETEEAGVVT(0.001)T(0.005)AT(0.034)AS(0.013)VNLKVS(0.948)PK;QVETEEAGVVTT(0.001)AT(0.001)AS(0.001)VNLKVS(0.997)PK;QVETEEAGVVTT(0.003)AT(0.003)AS(0.019)VNLKVS(0.975)PK;QVETEEAGVVT(0.074)T(0.072)AT(0.001)AS(0.004)VNLKVS(0.849)PK;QVETEEAGVVTTATASVNLKVS(1)PK;QVETEEAGVVT(0.001)T(0.001)AT(0.001)AS(0.006)VNLKVS(0.991)PK 148.6 7.99E-10 38169300 151941.6 162727.2 175644.3 159518.4 177504.9 112451.8 191218.6 142012.5 129786 169000.8 TRUE FALSE 163574.3657 154646.4039 181500.1933 146485.2364 170535.1657 116731.232 166111.3681 160574.0214 141074.5517 163486.3177 1.000538565 0.945928724 1.11018583 0.896009149 1.043115828 0.714012241 1.016056698 0.982186299 0.862913506 1 17.31881038 -5.799042029 24.99997614 0.929093833 1.01158933 0.146505574 0.097107843 323.668983 215188.7014 0.026638704 0.039512606 1.59E-06 5.799042029 0.082495497 QVHPDT(ph)GISSK ddPTM_A459_MK2206_30min_R1 2 QVHPDTGISSK 11 0 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880;Q96A08;Q16778;P33778;P23527;P06899;Q8N257 U3KQK0;Q16778 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 1 QVHPDT(0.984)GIS(0.013)S(0.003)K;QVHPDT(0.998)GIS(0.002)SK 113.54 0.016462 5888100 8000.5 6600.8 7456.1 6007.2 8155.4 7930.4 10568.2 8098.9 6088 6699.4 TRUE FALSE 7320.015463 6171.08672 6950.000706 6469.875585 7830.553149 8379.412395 9863.214661 8028.092171 6720.869386 7529.37225 0.972194656 0.819601756 0.923051813 0.859284861 1.040000798 1.112896549 1.309965072 1.066236587 0.89262015 1 12.87831387 -6.394808425 3.870658709 1.093773885 0.890639106 0.399570959 0.105501953 0.237499166 6.215124988 0.035636368 0.040540463 4.03E-07 6.394808425 -0.20313478 QVHPDT(ph)GISSK ddPTM_A459_MK2206_30min_R2 2 QVHPDTGISSK 11 0 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880;Q96A08;Q16778;P33778;P23527;P06899;Q8N257 U3KQK0;Q16778 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 1 QVHPDT(1)GISSK;QVHPDT(0.991)GIS(0.008)S(0.001)K 120.29 0.0067743 0 64743 71073 59376 73480 59096 62929 78712 60480 47225 59855 TRUE FALSE 69699.77386 67543.61817 61355.56621 67476.44895 56775.59411 65323.80719 68377.01985 68384.94366 51332.54514 57901.93625 1.203755494 1.166517435 1.059646191 1.165357384 0.980547418 1.128180013 1.180910765 1.181047614 0.886542808 1 15.82132397 -1.522882527 0.054211546 0.795864362 1.69253627 0.250681967 0.088534471 693.4446971 2.836733798 10.38620185 50.64607761 0.029999739 1.522882527 0.896671908 QVHPDTGIS(ph)SK ddPTM_A459_MK2206_30min_R1 1 QVHPDTGISSK 11 0 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880;Q96A08;Q16778;P33778;P23527;P06899;Q8N257 U3KQK0;Q16778 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 1 QVHPDT(0.001)GIS(0.789)S(0.21)K 120.87 0.0034667 0 1799.6 1931.2 1888.3 1921.7 1821.1 1846.2 1737.7 1481.8 1478.9 1473.4 TRUE FALSE 1646.53457 1805.478529 1760.127457 2069.709667 1748.561731 1950.730249 1621.781204 1468.844779 1632.636947 1655.935916 0.994322639 1.090307005 1.062920032 1.249873046 1.055935628 1.178022791 0.979374376 0.887017888 0.98593003 1 10.69343113 -7.401632315 5.841854971 0.948950913 1.106498802 0.487787361 0.071352352 0.188980396 8.253208637 0.03016513 0.02006109 3.97E-08 7.401632315 0.157547888 QVHPDTGIS(ph)SK ddPTM_A459_MK2206_30min_R2 3 QVHPDTGISSK 11 0 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880;Q96A08;Q16778;P33778;P23527;P06899;Q8N257 U3KQK0;Q16778 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 1 QVHPDT(0.227)GIS(0.695)S(0.078)K;QVHPDTGIS(0.775)S(0.225)K;QVHPDTGIS(0.921)S(0.079)K 198.48 1.97E-05 40154000 262674 254463 215602 270193 227680 174938 352073 254574 158959 247864 TRUE FALSE 282784.5234 241826.7374 222790.0631 248117.3676 218740.1392 181595.3882 305845.3922 287847.6959 172784.9665 239776.218 1.17936852 1.008551805 0.9291583 1.034787227 0.912267868 0.757353626 1.275545151 1.200484762 0.720609275 1 17.87132905 -4.769460602 4.529851462 0.987119779 1.19381061 0.117756896 0.16246921 0.468866969 21.47224027 0.041414504 0.312584014 1.70E-05 4.769460602 0.206690832 QVHPDTGISS(ph)K ddPTM_A459_MK2206_30min_R2 1 QVHPDTGISSK 11 0 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880;Q96A08;Q16778;P33778;P23527;P06899;Q8N257 U3KQK0;Q16778 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 1 QVHPDTGIS(0.066)S(0.934)K 162.7 0.0004159 25586000 286020 235500 243800 293520 219270 182230 341790 242590 166570 241400 TRUE FALSE 307917.9111 223805.4124 251928.1703 269538.4771 210660.3581 189164.8903 296912.5624 274297.3459 181057.9575 233523.1378 1.318575598 0.958386456 1.078814599 1.154225999 0.902096298 0.810047742 1.271448154 1.174604575 0.775331983 1 17.83320598 -4.753540034 24.88083213 1.023940772 1.318576167 0.263310793 0.152058559 408.8312646 1287599.361 0.038441739 0.407800824 1.76E-05 4.753540034 0.294635395 QVHPDTGISSK ddPTM_A459_MK2206_30min_R1 4 QVHPDTGISSK 11 0 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880;Q96A08;Q16778;P33778;P23527;P06899;Q8N257 U3KQK0;Q16778 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 0 ;;; 136.01 0.0020378 198300000 75173 62022 72212 51984 80954 73936 86660 77038 58767 56909.5 FALSE TRUE 68779.1416 57984.35653 67310.45063 55987.81669 77729.43076 78122.19243 80879.06952 76364.46489 64876.03995 63959.8785 1.075348222 0.9065739 1.05238553 0.875358396 1.215284215 1.221424966 1.264528192 1.193943245 1.014324002 1 15.96487958 -6.272137718 24.97957686 1.170420518 0.977711254 0.418798922 0.099034804 616.9740727 1440571.481 0.029947033 0.034301358 5.34E-07 6.272137718 -0.192709264 QVHPDTGISSK ddPTM_A459_MK2206_30min_R2 4 QVHPDTGISSK 11 0 U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q5QNW6-2;Q99880;Q96A08;Q16778;P33778;P23527;P06899;Q8N257 U3KQK0;Q16778 HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BL;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 0 ;;; 180.19 0.0006811 207943900 1837441 2401547 2258367 2688149 2433777 2482983 2632166 1949817 2246399 2290816 FALSE TRUE 1978116.896 2282289.668 2333659.829 2468518.628 2338214.686 2577474.658 2286559.442 2204664.777 2441786.724 2216066.862 0.892625096 1.029883036 1.053063817 1.11391884 1.055119196 1.16308524 1.031809772 0.99485481 1.101856071 1 21.07956998 -4.682926927 2.100022509 1.067876634 0.811201499 0.523249285 0.04893836 0.775210695 3.06776992 0.013053804 0.417069793 2.08E-05 4.682926927 -0.256675134 QVHQCIER ddPTM_A459_MK2206_30min_R2 2 QVHQCIER 8 0 E7EQY1;C9JF51;Q96C01 E7EQY1 FAM136A Protein FAM136A 0 ; 121.05 0.0099558 4460300 25314 21824.6 24150.7 24656.1 27711.4 25126 25971 18090.4 21990.1 24798 FALSE TRUE 27252.0593 20740.8221 24955.87228 22641.61776 26623.3112 26082.18754 22560.9765 20454.87739 23902.75915 23988.84329 1.136030569 0.864602843 1.040311614 0.943839496 1.109820548 1.087263242 0.940477881 0.852682939 0.996411493 1 14.55007597 -7.378571537 8.623811803 0.934294433 1.022833896 0.179364948 0.084236811 0.530815496 36.06606837 0.034896779 0.023469421 4.18E-08 7.378571537 0.088539462 QVIEEQTTSHES(ph)Q ddPTM_A459_MK2206_30min_R2 1 QVIEEQTTSHESQ 13 0 R4GN33;Q8IW41-2;Q8IW41 R4GN33 MAPKAPK5 MAP kinase-activated protein kinase 5 1 QVIEEQTTS(0.001)HES(0.999)Q 128.22 0.0018479 3097400 10582 10098 9685.9 7726.3 10248 11945 8971.5 9008.4 9860 10093 TRUE FALSE 11392.16606 9596.548004 10008.82307 7095.036575 9845.612028 12399.57535 7793.531273 10185.82881 10717.60498 9763.666237 1.166791836 0.98288366 1.025109096 0.7266775 1.008392932 1.269971243 0.798217707 1.04323812 1.097702924 1 13.25320726 -6.518368902 24.97988945 1.041511644 0.965465594 0.041549488 0.147540547 673.4947984 3730493.79 0.048907393 0.050116745 3.03E-07 6.518368902 -0.07604605 QVLQSTQS(ph)PR ddPTM_A459_MK2206_30min_R1 1 QVLQSTQSPR 10 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 QVLQSTQS(1)PR 132.03 0.0025097 7454500 3346.9 3335.6 3152.8 2614.2 2611.1 2134.5 2722.5 2627.9 2364.8 2151.3 TRUE FALSE 3062.22858 3118.451834 2938.79672 2815.546137 2507.094358 2255.353545 2540.886992 2604.924547 2610.629423 2417.819285 1.266525004 1.289778708 1.2154741 1.164498171 1.036923799 0.932804846 1.050900292 1.077385958 1.079745471 1 11.2394907 -5.9750949 1.933368726 1.029035691 1.269961651 0.858006143 0.042164477 0.128701488 0.970193153 0.015070527 0.024705019 1.06E-06 5.9750949 0.24092596 QVLQSTQS(ph)PR ddPTM_A459_MK2206_30min_R2 5 QVLQSTQSPR 10 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 QVLQST(0.001)QS(0.999)PR;QVLQS(0.002)T(0.001)QS(0.998)PR;QVLQS(0.003)T(0.001)QS(0.995)PR;QVLQS(0.113)T(0.016)QS(0.871)PR;QVLQS(0.031)T(0.013)QS(0.956)PR 134.49 0.0020927 265555500 149946 163776 149813 140626 152849 131843 124294 102713 106101 98158 TRUE FALSE 161425.981 155643.122 154807.6906 129136.406 146847.3803 136860.3778 107974.0485 116137.9418 115329.4732 94955.1125 1.700024115 1.639123138 1.630324967 1.359973176 1.546492615 1.441316577 1.137106214 1.223082557 1.214568338 1 16.53495806 -6.566299297 0.300921581 0.977628937 1.869377371 0.865891653 0.083399407 0.959608801 0.165357517 0.117785587 0.301036752 2.71E-07 6.566299297 0.891748435 QVPGGGGGGGS(ph)GGGGGSGGGGSGGGR ddPTM_A459_MK2206_30min_R2 1 QVPGGGGGGGSGGGGGSGGGGSGGGR 26 0 K7EN53;K7EQC2;Q9UHB9-4;Q9UHB9-2;Q9UHB9 K7EN53 SRP68 Signal recognition particle subunit SRP68 1 QVPGGGGGGGS(0.577)GGGGGS(0.262)GGGGS(0.161)GGGR 161.56 2.08E-17 0 2260.8 2502.9 2140 2660.2 1086.2 2384.3 2537.5 1150.4 2039.9 602.47 TRUE FALSE 2433.888586 2378.609626 2211.346532 2442.85315 1043.55033 2475.036207 2204.323202 1300.76123 2217.326815 582.8114532 4.176116603 4.081267814 3.794274323 4.191498188 1.790545338 4.246718546 3.782223547 2.231873143 3.804535416 1 9.186885419 -9.970024671 0.240784311 9.37E-20 4.139831856 0.508750982 0.783895607 9.19864172 0.685716027 10.04174115 1.551535782 1.07E-10 9.970024671 4.139831856 QVPGGGGGGGSGGGGGS(ph)GGGGSGGGR ddPTM_A459_MK2206_30min_R1 2 QVPGGGGGGGSGGGGGSGGGGSGGGR 26 0 K7EN53;K7EQC2;Q9UHB9-4;Q9UHB9-2;Q9UHB9 K7EN53 SRP68 Signal recognition particle subunit SRP68 1 QVPGGGGGGGS(0.127)GGGGGS(0.733)GGGGS(0.14)GGGR;QVPGGGGGGGSGGGGGS(0.931)GGGGS(0.068)GGGR 204.23 1.69E-32 4282500 509.22 635.39 390.47 328.07 635.71 590.76 539.07 473.22 397.23 356.92 TRUE FALSE 465.908165 594.0259955 363.9659843 353.3380082 610.3883246 624.2083207 503.1096239 469.0826874 438.52348 401.1379442 1.161466203 1.480852171 0.907333723 0.880839156 1.521641952 1.556093931 1.254206019 1.169379996 1.093198702 1 8.647954629 -8.266415513 2.004318626 1.012146885 1.252981528 0.124519356 0.220102861 0.770105868 5.711546636 0.224502382 0.065576904 5.41E-09 8.266415513 0.240834642 QVPGGGGGGGSGGGGGS(ph)GGGGSGGGR ddPTM_A459_MK2206_30min_R2 2 QVPGGGGGGGSGGGGGSGGGGSGGGR 26 0 K7EN53;K7EQC2;Q9UHB9-4;Q9UHB9-2;Q9UHB9 K7EN53 SRP68 Signal recognition particle subunit SRP68 1 QVPGGGGGGGS(0.012)GGGGGS(0.954)GGGGS(0.035)GGGR;QVPGGGGGGGS(0.085)GGGGGS(0.547)GGGGS(0.368)GGGR 171.16 2.54E-17 2958900 4600.2 4049.3 5701.2 4634.9 4042.55 5624.5 5330.4 2888.26 1870.71 3723 TRUE FALSE 4952.394849 3848.21765 5891.275163 4256.213844 3883.819175 5838.544289 4630.512077 3265.765499 2033.420974 3601.518815 1.375085097 1.068498555 1.635775201 1.181783037 1.078383697 1.621133913 1.285710922 0.906774521 0.564600958 1 11.81438973 -7.822419674 3.85408652 0.77185387 1.32247383 0.550428039 0.207684061 0.161142855 4.760368814 0.119050489 0.05481263 1.51E-08 7.822419674 0.55061996 QVQS(ph)LTCEVDALK ddPTM_A459_MK2206_30min_R1 2 QVQSLTCEVDALK 13 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 QVQS(0.5)LT(0.5)CEVDALK;QVQS(0.812)LT(0.188)CEVDALK 252.82 3.90E-23 22497000 5733.7 5732.6 6002 4013 4988.3 5139.4 6177.7 4736.8 5769.5 5820.5 TRUE FALSE 5246.018706 5359.406698 5594.600963 4322.081955 4789.605448 5430.388387 5765.596905 4695.386657 6369.260171 6541.587483 0.801948873 0.819282279 0.855235977 0.660708424 0.732177848 0.830133114 0.881375801 0.717774802 0.973656653 1 12.67542507 -8.326709742 6.971669985 0.991502843 0.789281487 0.609602895 0.063860478 0.201388574 17.99700219 0.063815954 0.016645707 4.71E-09 8.326709742 -0.202221356 QVQS(ph)LTCEVDALK ddPTM_A459_MK2206_30min_R2 3 QVQSLTCEVDALK 13 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 QVQS(0.921)LT(0.079)CEVDALK;QVQS(0.822)LT(0.178)CEVDALK;QVQS(0.633)LT(0.367)CEVDALK 146.27 0.00077061 25821300 57244 56135 49102 54985 48556 46121.1 64383 44423 42129.4 53706 TRUE FALSE 61626.64465 53347.41753 50739.03617 50492.54961 46649.44747 47876.27078 55929.43476 50229.23863 45793.73906 51953.57762 1.186186736 1.026828565 0.976622564 0.971878202 0.897906354 0.921520191 1.07652711 0.966810005 0.881435719 1 15.66493548 -4.580325219 1.525874466 0.959439374 1.372748575 0.632733609 0.051931544 1.248050623 1.87653172 0.015261508 0.898921487 2.63E-05 4.580325219 0.413309202 QVQS(ph)LTCEVDALKGTNESLER ddPTM_A459_MK2206_30min_R1 1 QVQSLTCEVDALKGTNESLER 21 1 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 QVQS(0.767)LT(0.233)CEVDALKGTNESLER 116.05 4.22E-05 23421000 3050.5 3121.6 3073.8 2781.6 3053.7 2366.4 2250.6 2941.7 1894.3 1175.1 TRUE FALSE 2791.038956 2918.383273 2865.15902 2995.839314 2932.064663 2500.383523 2100.46658 2915.981027 2091.219264 1320.68026 2.113334349 2.209757624 2.16945699 2.268406219 2.220116975 1.893254257 1.590442929 2.207938679 1.583440995 1 10.36706551 -9.378344572 0.296486729 0.708509599 2.276052936 0.782362462 0.18346685 2.296278762 0.333877707 1.040434443 0.24644498 4.18E-10 9.378344572 1.567543337 QVQSLT(ph)CEVDALK ddPTM_A459_MK2206_30min_R1 2 QVQSLTCEVDALK 13 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 QVQS(0.002)LT(0.998)CEVDALK;QVQS(0.015)LT(0.985)CEVDALK 184 0.00028546 36763000 10175 11135.8 12250.7 8541 9554.7 9369 12285.6 9811.8 12076.2 13033.9 TRUE FALSE 9309.562819 10410.8574 11419.15662 9198.8293 9174.116067 9899.464683 11466.05004 9726.016467 13331.56421 14648.63793 0.635524126 0.710704807 0.779537092 0.627964821 0.626277754 0.675794209 0.782738306 0.663953639 0.910088997 1 13.83847891 -8.390345126 3.290828906 0.998032671 0.689768772 0.797611746 0.054557095 0.10327576 2.002857016 0.054183613 0.01451179 4.07E-09 8.390345126 -0.308263899 QVQSLT(ph)CEVDALK ddPTM_A459_MK2206_30min_R2 1 QVQSLTCEVDALK 13 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 QVQS(0.171)LT(0.829)CEVDALK 155.26 0.00085502 21062000 78598 76189 79043 75968 76788 71332 82260 65213 64634 74332 TRUE FALSE 84615.52331 72405.56505 81678.25417 69761.17139 73772.91729 74046.58924 71459.16319 73736.56301 70255.74849 71906.55293 1.176742868 1.006939731 1.135894447 0.970164311 1.025955414 1.029761353 0.993778178 1.025449837 0.977042364 1 16.13383563 -1.522878745 0.58681463 1.005346554 9.438555841 0.524130123 0.044567024 128.5426008 1.042591807 0.019300225 1384.257798 0.03 1.522878745 8.433209287 QVQSLT(ph)CEVDALKGTNESLER ddPTM_A459_MK2206_30min_R1 1 QVQSLTCEVDALKGTNESLER 21 1 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 QVQS(0.143)LT(0.857)CEVDALKGTNESLER 85.17 0.0015533 21283000 3638.5 3477.7 3440.9 3168 4071 2787.5 2719.2 4086.3 1971.9 1593.4 TRUE FALSE 3329.026468 3251.301098 3207.341295 3411.999909 3908.84345 2945.325841 2537.807129 4050.57391 2176.886062 1790.802422 1.858957989 1.815555451 1.791007906 1.905291096 2.182732948 1.644696146 1.417134073 2.261876498 1.215592538 1 10.80639046 -8.437453265 5.753504031 1.00368141 1.844569028 0.639394627 0.228242508 0.125372698 6.083042511 0.218209757 0.056617101 3.65E-09 8.437453265 0.840887618 QVQSLTCEVDALK ddPTM_A459_MK2206_30min_R1 1 QVQSLTCEVDALK 13 0 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 0 152.74 0.005962 6785300 1090.2 855.24 649.57 699.68 940.82 841.72 710.34 690.65 705.82 845.96 FALSE TRUE 997.4727651 799.5637206 605.4789982 753.5694748 903.3451472 889.377459 662.9545147 684.6117199 779.1925148 950.7639115 1.04912771 0.840969783 0.636834224 0.792593688 0.950125616 0.9354346 0.697286158 0.720064899 0.819543638 1 9.892943333 -10.92734306 6.187982564 1.000037046 0.820566174 0.157384304 0.119363517 6.44E-05 6.20E-06 0.122054527 0.029596469 1.18E-11 10.92734306 -0.179470872 QVQSLTCEVDALKGTNES(ph)LER ddPTM_A459_MK2206_30min_R1 1 QVQSLTCEVDALKGTNESLER 21 1 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 QVQSLTCEVDALKGT(0.006)NES(0.994)LER 99.171 0.00016962 10450000 1383.7 1170.5 1263 1103.8 1368 1001.3 1196.1 1598.8 1090.5 909.2 TRUE FALSE 1266.009049 1094.300237 1177.271079 1188.814867 1313.509663 1057.992741 1116.310351 1584.82186 1203.861377 1021.83856 1.238952119 1.070913038 1.152110641 1.163407718 1.285437558 1.0353815 1.092452756 1.550951317 1.178132657 1 9.996951568 QVQSLTCEVDALKGTNES(ph)LER ddPTM_A459_MK2206_30min_R2 2 QVQSLTCEVDALKGTNESLER 21 1 P08670;B0YJC4;B0YJC5 P08670;B0YJC5 VIM Vimentin 1 QVQSLT(0.001)CEVDALKGT(0.059)NES(0.94)LER;QVQSLTCEVDALKGT(0.001)NES(0.999)LER 80.172 0.0011211 12611900 14608.1 27506 23852 25456 24864 22555.1 23673 17152.4 25323 19334.8 TRUE FALSE 15726.50737 26140.09204 24647.21378 23376.16337 23887.71443 23413.45014 20564.70666 19394.27757 27525.54877 18703.90706 0.840814024 1.397573884 1.317757498 1.249801087 1.277151044 1.251794615 1.099487214 1.036910497 1.471647003 1 14.19105205 -7.240733659 23.43608446 1.155087045 1.238498189 0.030133443 0.182443867 1328.368065 1503533.432 0.06751 0.052212615 5.74E-08 7.240733659 0.083411144 QVS(ph)PAASLR ddPTM_A459_MK2206_30min_R2 2 QVSPAASLR 9 0 A0A2R8YH03;Q5VWN6 A0A2R8YH03 FAM208B Protein FAM208B 1 QVS(0.999)PAAS(0.001)LR;QVS(0.982)PAAS(0.018)LR 100.09 0.018229 3942600 56977 93980 76934 131301 123208 137284 95399 90897 106570 78734 TRUE FALSE 61339.20293 89313.08986 79498.94116 120573.2883 118370.2348 142508.4388 82872.99671 102777.55 115839.266 76164.91603 0.805347214 1.172627694 1.043773765 1.583055488 1.554130708 1.871050954 1.088073105 1.349408039 1.520900593 1 16.21683898 -5.747300618 23.44145826 1.448438275 1.023786833 0.365345227 0.24983612 120.4732381 199735.3308 0.067886074 0.116705795 1.79E-06 5.747300618 -0.424651441 QVS(ph)SPCAQR ddPTM_A459_MK2206_30min_R2 1 QVSSPCAQR 9 0 Q6NSI8-3;Q6NSI8;Q6NSI8-2 Q6NSI8-3 KIAA1841 Uncharacterized protein KIAA1841 1 QVS(0.5)S(0.5)PCAQR 117.25 0.0075913 5358500 21826 18131 17357 19116 14929 20312 19406 16456 17049 22402 TRUE FALSE 23497.01534 17230.6409 17935.67372 17554.16165 14342.81245 21084.98739 16857.96889 18606.8557 18531.8912 21671.02457 1.084259549 0.795100428 0.82763386 0.810029152 0.66184284 0.972957569 0.77790364 0.858605261 0.855146056 1 14.40347974 -9.769042832 11.90366407 1 0.842191406 0.146747491 0.107822274 0 0 0.100375914 0.024344735 1.70E-10 9.769042832 -0.157808593 QVS(ph)SVNEEDFVR ddPTM_A459_MK2206_30min_R1 2 QVSSVNEEDFVR 12 0 P40189-3;P40189 P40189-3 IL6ST Interleukin-6 receptor subunit beta 1 QVS(0.5)S(0.5)VNEEDFVR;QVS(0.762)S(0.238)VNEEDFVR 241.41 1.99E-13 7841700 2603 2280 2227.93 1815.96 3056.1 2430.4 3019.2 2731.8 2566.6 2353.8 TRUE FALSE 2381.601181 2131.571586 2076.704319 1955.825554 2934.369066 2568.007148 2817.794677 2707.916161 2833.407255 2645.406514 0.90027796 0.805763339 0.785022758 0.739328925 1.109231814 0.970741976 1.065165093 1.023629505 1.071066862 1 11.36927372 -6.260879779 24.99961197 1.038952119 0.805854642 0.828418234 0.051805226 19.73126497 881476.7721 0.015422188 0.018729498 5.48E-07 6.260879779 -0.233097477 QVS(ph)TENDSTLVHR ddPTM_A459_MK2206_30min_R2 1 QVSTENDSTLVHR 13 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 QVS(0.5)T(0.5)ENDSTLVHR 84.195 0.029372 0 14449 17576 13740 21070 19055 20198 23526 17759 14379 14894 TRUE FALSE 15555.22655 16703.2014 14198.08474 19348.5136 18306.80496 20966.64904 20437.00794 20080.16228 15629.65943 14408.01 1.079623525 1.159299681 0.985429962 1.34289979 1.270599129 1.455207835 1.418447651 1.393680479 1.084789602 1 13.81458347 -5.771644007 24.99975405 1.309783715 1.083235913 0.288711455 0.143031432 219.8770084 538664.9257 0.039286349 0.059022469 1.69E-06 5.771644007 -0.226547803 QVSS(ph)PSFTNR ddPTM_A459_MK2206_30min_R2 2 QVSSPSFTNR 10 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 QVS(0.066)S(0.93)PS(0.004)FTNR;QVS(0.23)S(0.759)PS(0.011)FTNR 116.71 0.0062495 16986000 127535 121712 125664 144893 125107 119946 118176 93625 116447 140801 TRUE FALSE 137299.1777 115667.9591 129853.575 133054.7784 120194.6706 124510.6291 102659.3492 105862.109 126575.3496 136206.6749 1.008020919 0.849209183 0.953356912 0.976859456 0.882443321 0.914130157 0.753702778 0.777216748 0.929288889 1 17.05543788 -6.769415567 2.250424236 0.848243921 0.937562941 0.123254885 0.078703985 0.492322003 5.121074185 0.030150697 0.027668865 1.70E-07 6.769415567 0.08931902 QVSS(ph)VNEEDFVR ddPTM_A459_MK2206_30min_R2 2 QVSSVNEEDFVR 12 0 P40189-3;P40189 P40189-3 IL6ST Interleukin-6 receptor subunit beta 1 QVS(0.074)S(0.926)VNEEDFVR;QVS(0.078)S(0.922)VNEEDFVR 214.48 1.61E-06 6137200 24179 22054 20592.8 21761.6 22810 26565 32763 17978.3 30592 24008 TRUE FALSE 26030.16283 20958.83043 21279.35367 19983.60767 21914.36479 27575.94969 28461.17874 20328.12554 33252.83686 23224.62093 1.120800331 0.902440152 0.916241162 0.86044925 0.943583314 1.187358441 1.225474415 0.875283416 1.431792449 1 14.50336743 -6.752406989 24.44552627 1.14128025 0.939426228 0.296232243 0.150126733 180.7446355 489171.5295 0.047452104 0.046773518 1.77E-07 6.752406989 -0.201854022 QVVES(ph)AYEVIK ddPTM_A459_MK2206_30min_R1 2 QVVESAYEVIK 11 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 1 QVVES(0.996)AY(0.004)EVIK;QVVES(1)AYEVIK 127.79 0.0028996 9877400 4609.3 5654.9 5027.3 4917 4316.9 4209.9 4125.3 4015.2 4175.5 3618.5 TRUE FALSE 4217.254831 5286.764982 4686.060883 5295.708192 4144.948732 4448.2609 3850.108764 3980.09553 4609.558167 4066.787098 1.036999166 1.299985678 1.152275929 1.302184763 1.019219505 1.093802255 0.94672002 0.978683032 1.133464343 1 11.98967375 -6.282426949 24.39974921 1.026743617 1.20189987 0.478819681 0.086431635 486.6099566 565721.6165 0.025645344 0.029112159 5.22E-07 6.282426949 0.175156253 QVVESAY(ph)EVIK ddPTM_A459_MK2206_30min_R1 1 QVVESAYEVIK 11 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 1 QVVES(0.011)AY(0.989)EVIK 151.98 0.0081993 4987200 2057.5 1937.2 2347.9 1923 2216.6 1967.3 2035.4 2254.1 1825.8 1537.5 TRUE FALSE 1882.498821 1811.087928 2188.53109 2071.109793 2128.308128 2078.686826 1899.62218 2234.392641 2015.598444 1727.977108 1.089423472 1.048097177 1.266527826 1.198574787 1.231676114 1.202959702 1.099332955 1.293068428 1.166449738 1 10.75486839 -10.49647872 3.096454782 0.99988501 1.180251997 0.334679285 0.074913269 4010440.502 6267920.627 5190.535876 0.019882443 3.19E-11 10.49647872 0.180366987 QVVESAYEVIK ddPTM_A459_MK2206_30min_R2 1 QVVESAYEVIK 11 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 137.01 0.042895 0 12559 14819 14126 17493 12561 10059 16417 15448 11002 14447 FALSE TRUE 13520.5267 14083.11001 14596.95379 16063.76594 12067.79203 10441.80229 14261.42818 17467.10664 11958.93407 13975.59557 0.96743832 1.007693013 1.044460232 1.149415483 0.863490358 0.747145425 1.020452267 1.249829143 0.855701212 1 13.77062214 -10.58758946 11.10893979 0.999989477 0.994098891 0 0.138147051 0 0 0.139841416 0.033916525 2.58E-11 10.58758946 -0.005890586 QVVQTPNT(ph)VLSTPFR ddPTM_A459_MK2206_30min_R2 1 QVVQTPNTVLSTPFR 15 0 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 QVVQT(0.118)PNT(0.877)VLS(0.002)T(0.004)PFR 118.2 0.0047989 3719700 15733 12800 11285 16088 12874 14298 14809 11264 13314 12354 TRUE FALSE 16937.53058 12164.37061 11661.23627 14773.55894 12368.50207 14842.12041 12864.56051 12736.24348 14472.02765 11950.88999 1.417261023 1.017863157 0.975763 1.236189016 1.034944015 1.24192595 1.07645209 1.065715063 1.210958152 1 13.54483044 -14.52267986 0.015690511 5.05E-06 1.975026698 0.102464577 0.127852326 16247.04872 19.26159246 1534.238236 954.0439336 3.00E-15 14.52267986 1.975021652 QVVSVVQDEEVGLPFEASPES(ph)PPPASPDGVTEIR ddPTM_A459_MK2206_30min_R2 2 QVVSVVQDEEVGLPFEASPESPPPASPDGVTEIR 34 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 QVVSVVQDEEVGLPFEAS(0.011)PES(0.983)PPPAS(0.006)PDGVTEIR;QVVSVVQDEEVGLPFEAS(0.053)PES(0.912)PPPAS(0.034)PDGVT(0.001)EIR 130.56 2.59E-25 10550000 21640 27335 26856 30031 26368 26099 26209 19340.3 23858 25272 TRUE FALSE 23296.77504 25977.58365 27751.36564 27577.37124 25332.65983 27092.21573 22767.72682 21868.14362 25933.12571 24447.37671 0.952935577 1.062591866 1.135146972 1.128029873 1.036211784 1.108184983 0.931295291 0.894498574 1.060773351 1 14.57739205 -7.262213988 24.99966356 0.962850016 1.074149258 0.361903427 0.063784465 73.75473962 2380291.655 0.02610539 0.018765569 5.47E-08 7.262213988 0.111299242 QVVSVVQDEEVGLPFEASPESPPPAS(ph)PDGVTEIR ddPTM_A459_MK2206_30min_R2 3 QVVSVVQDEEVGLPFEASPESPPPASPDGVTEIR 34 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 QVVSVVQDEEVGLPFEAS(0.001)PES(0.004)PPPAS(0.956)PDGVT(0.039)EIR;QVVSVVQDEEVGLPFEASPESPPPAS(0.972)PDGVT(0.028)EIR;QVVSVVQDEEVGLPFEASPES(0.001)PPPAS(0.951)PDGVT(0.048)EIR 133.95 1.32E-25 11431400 16619.43 19422.2 17486.5 19620.7 16778.2 20789.5 17445.6 11878.4 18131.5 15767.61 TRUE FALSE 17891.82634 18457.72179 18069.49118 18017.62605 16119.40356 21580.65899 15154.97176 13430.94766 19708.5451 15253.11418 1.172994979 1.210095301 1.184642754 1.181242456 1.056794264 1.414836258 0.993565746 0.880538066 1.292099755 1 13.8968162 QWTSLS(ph)LR ddPTM_A459_MK2206_30min_R2 2 QWTSLSLR 8 0 Q9UHB6;Q9UHB6-4;F8VRN8;F8VVQ7;F8VTU2 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 QWTSLS(1)LR;QWTSLS(1)LR 90.149 0.028672 5570500 12463.4 21112.5 18802.2 12519.1 13147.2 17587.2 21434 16995.4 23606 15082.5 TRUE FALSE 13417.60749 20064.08395 19429.05596 11496.24948 12630.97487 18256.49322 18619.69005 19216.75713 25659.20721 14590.35926 0.91962146 1.375160378 1.33163657 0.787934641 0.865706913 1.251270986 1.276163919 1.317085946 1.75864122 1 13.83272779 -7.22052178 2.248309903 1.383195998 1.077120864 0.212310949 0.248033435 0.503218828 4.982283675 0.121808699 0.081981246 6.02E-08 7.22052178 -0.306075134 QWYESHYALPLGR ddPTM_A459_MK2206_30min_R1 2 QWYESHYALPLGR 13 0 P62241;Q5JR95 P62241 RPS8 40S ribosomal protein S8 0 ; 198.52 0.00021055 39968000 12005.3 11035.3 12241.4 10210.8 13334.5 12484.1 12930.4 12490.9 10718.7 10866.4 FALSE TRUE 10984.18619 10316.89996 11410.48787 10997.23759 12803.35863 13190.93895 12067.83661 12381.69338 11832.94722 12212.61167 0.899413368 0.844774258 0.934320044 0.900482049 1.048371878 1.08010795 0.988145446 1.013844844 0.9689121 1 13.57608413 -6.250446593 23.30487138 1.019012243 0.894004502 0.738983101 0.035448272 154.5347721 327614.8759 0.011066857 0.014123313 5.62E-07 6.250446593 -0.125007741 QWYESHYALPLGR ddPTM_A459_MK2206_30min_R2 2 QWYESHYALPLGR 13 0 P62241;Q5JR95 P62241 RPS8 40S ribosomal protein S8 0 ; 222.73 9.96E-09 14411600 51036 59554 54409 57308 55024 68342 56454 47377 59243 59077 FALSE TRUE 54943.3554 56596.63496 56222.9689 52625.75308 52863.48129 70942.8027 49041.52199 53569.33657 64395.84905 57149.32233 0.961399946 0.990329065 0.983790649 0.920846494 0.925006267 1.241358599 0.858129545 0.937357337 1.126799871 1 15.80244877 QY(ph)KT(ph)KSS(ph)Y(ph)K ddPTM_A459_MK2206_30min_R2 1 QYKTKSSYK 9 2 Q5VWP3-4;Q5VWP3-3 Q5VWP3-4 4 QY(1)KT(0.986)KS(0.275)S(0.785)Y(0.953)K 80.245 0.038297 4275200 18355 13511 13634 12034 12599 19343 26800 9766.1 17162 14434 TRUE FALSE 19760.27291 12840.06339 14088.55076 11050.78371 12104.29996 20079.11142 23281.12781 11042.5628 18654.71974 13963.01976 1.415186203 0.919576396 1.008990247 0.791432218 0.866882677 1.438020698 1.667341893 0.790843456 1.336008976 1 13.76932336 -6.753673751 24.99957272 1.259676909 0.984789003 0.169260056 0.270634402 305.4123754 983200.511 0.091687619 0.090056609 1.76E-07 6.753673751 -0.274887906 QYAENYTRPSS(ph)R ddPTM_A459_MK2206_30min_R1 1 QYAENYTRPSSR 12 1 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 QYAENYTRPS(0.085)S(0.915)R 134.02 0.0078734 13328000 4643.6 4126.6 4611.1 3237.9 4339.5 4439.8 5150.5 4534 4430 4853.1 TRUE FALSE 4248.637435 3857.95759 4298.111379 3487.283619 4166.648526 4691.177639 4806.919543 4494.359716 4890.514353 5454.338667 0.778946394 0.70731904 0.788016961 0.639359569 0.763914524 0.86008184 0.881301994 0.823997187 0.89662829 1 12.41318857 -6.744040309 3.320725109 0.883783988 0.728215056 0.661538427 0.056545665 0.153420377 3.524202453 0.019504668 0.018367931 1.80E-07 6.744040309 -0.155568931 QYAVGDETDLSIPTS(ph)PTSK ddPTM_A459_MK2206_30min_R2 1 QYAVGDETDLSIPTSPTSK 19 0 H0Y6B3;A0A0C4DG30;J3KQY3;B4DZ31;Q9NWS1-3;Q9NWS1-6;Q9NWS1-7;Q9NWS1-2;Q9NWS1 H0Y6B3 PARPBP PCNA-interacting partner 1 QYAVGDETDLSIPT(0.018)S(0.979)PT(0.002)SK 116.29 0.0014024 0 9710.8 10927 9186.9 6892.9 10237 7144.3 7576.4 5591.5 6226.2 5653.3 TRUE FALSE 10454.26631 10384.38107 9493.186661 6329.728021 9835.043943 7416.181343 6581.609579 6322.328248 6767.743622 5468.833284 1.911608157 1.898829335 1.735870554 1.157418355 1.798380648 1.356081079 1.203475995 1.156065274 1.237511416 1 12.41701737 -1.522878745 0.182625532 0.932669965 5.606696775 0.71825458 0.176578246 29.60875725 0.336966525 0.392373172 38.55563757 0.03 1.522878745 4.67402681 QYDPPAESQQS(ph)ESPPRR ddPTM_A459_MK2206_30min_R2 1 QYDPPAESQQSESPPRR 17 1 Q6P597;Q6P597-3;K7ENJ3;K7EL76 Q6P597 KLC3 Kinesin light chain 3 1 QYDPPAES(0.066)QQS(0.5)ES(0.435)PPRR 74.325 0.011975 4649500 36718 41047 38661 42989 43040 40673 37257 37975 40798 36194 TRUE FALSE 39529.15831 39008.66567 39949.93844 39476.66118 41350.03334 42220.83952 32365.11115 42938.46289 44346.53629 35012.99274 1.12898542 1.11411972 1.141003248 1.127486058 1.180991115 1.205862059 0.924374314 1.226357975 1.266573715 1 15.09560276 -11.9351304 2.0477055 4.05E-05 1.143160451 0.199861451 0.087565605 2708597.046 227872.78 12578460.17 0.021934366 1.16E-12 11.9351304 1.143119973 QYDPPAESQQSES(ph)PPRR ddPTM_A459_MK2206_30min_R2 1 QYDPPAESQQSESPPRR 17 1 Q6P597;Q6P597-3;K7ENJ3;K7EL76 Q6P597 KLC3 Kinesin light chain 3 1 QYDPPAESQQS(0.02)ES(0.98)PPRR 119.66 0.00076841 3546300 23964 24872 22050 28371 23793 27388 24195 18540 21986 27083 TRUE FALSE 25798.70227 23636.89265 22785.13599 26052.99855 22858.76727 28430.26953 21018.16744 20963.24166 23898.30254 26199.28393 0.984710206 0.902196133 0.869685449 0.994416436 0.872495879 1.08515445 0.802242057 0.800145596 0.912173882 1 14.67723976 QYLLEAAY(ph)T(ph)LQPQK ddPTM_A459_MK2206_30min_R1 1 QYLLEAAYTLQPQK 14 0 M0QZD8 M0QZD8 2 QYLLEAAY(1)T(1)LQPQK 96.591 0.021 0 774.44 862.82 1064.9 832.31 724.17 733.2 764.52 613.87 680.37 698.06 TRUE FALSE 708.5698113 806.6502612 992.617555 896.4146604 695.3247754 774.7131504 713.5202657 608.5029993 751.0968962 784.5409429 0.903164861 1.028181217 1.265220845 1.142597679 0.886282331 0.987473194 0.909474862 0.775616626 0.95737119 1 9.615704929 -6.266076459 24.95707542 0.911060959 1.093635421 0.37715096 0.103565167 406.5612586 2188135.821 0.033770726 0.039570322 5.42E-07 6.266076459 0.182574462 QYPDS(ph)PHPVPHR ddPTM_A459_MK2206_30min_R2 1 QYPDSPHPVPHR 12 0 Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 QY(0.053)PDS(0.947)PHPVPHR 94.007 0.012911 3916600 27117 34454 30745 31143 28607 40091 26576 24409 33277 28457 TRUE FALSE 29193.09837 32743.06446 31770.02296 28598.51728 27483.74544 41616.6911 23086.53928 27599.34011 36171.37331 27528.45042 1.060470093 1.189426356 1.154079597 1.038871307 0.998376044 1.511770204 0.838642892 1.002575143 1.313963291 1 14.74863578 -11.28437733 2.433932033 0.968650393 1.119360773 0.041146415 0.177481063 23848238.41 16870296.79 4481093.84 0.047996405 5.20E-12 11.28437733 0.15071038 QYQDS(ph)PNQK ddPTM_A459_MK2206_30min_R2 2 QYQDSPNQK 9 0 H0Y9T5;Q8IU60 H0Y9T5 DCP2 m7GpppN-mRNA hydrolase 1 QYQDS(1)PNQK;QYQDS(1)PNQK 124.21 0.0035921 2241100 25048 23535 22784 26629 26543 25163 28259 22609.1 25318 29768 TRUE FALSE 26965.69414 22366.28612 23543.60719 24453.32552 25500.78845 26120.5956 24548.55935 25564.187 27520.11388 28796.6726 0.936417013 0.776696893 0.81758082 0.849171912 0.885546355 0.907069923 0.852479024 0.887747948 0.955669923 1 14.8136145 -8.387670226 0.49388276 1.00670675 0.841398405 0.538709311 0.042923275 0.764557798 0.475745189 0.050096322 0.025923844 4.10E-09 8.387670226 -0.165308345 QYS(ph)SLPR ddPTM_A459_MK2206_30min_R2 1 QYSSLPR 7 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 QYS(0.639)S(0.361)LPR 86.136 0.035301 47163000 243360 283870 248290 275150 251290 270420 270380 212580 228970 242050 TRUE FALSE 261991.8287 269773.4286 256567.8647 252669.3648 241423.092 280711.0226 234878.7812 240364.9359 248885.3967 234151.9283 1.118896738 1.152129861 1.095732444 1.079082998 1.031053187 1.198841387 1.003104193 1.026534087 1.062922687 1 17.83708539 -5.047775414 0.145813024 0.9680162 1.272822009 0.362395199 0.049767722 27.07094531 0.744067708 0.286886733 1.640283002 8.96E-06 5.047775414 0.30480581 QYSS(ph)LPR ddPTM_A459_MK2206_30min_R2 2 QYSSLPR 7 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 QYS(0.075)S(0.925)LPR;QYS(0.004)S(0.996)LPR 98.582 0.021764 58614800 243801 286362 207373 235954 243277 228464 237842 214050 235388 215784 TRUE FALSE 262466.592 272141.6795 214286.7123 216675.8034 233724.7226 237158.3576 206613.0597 242027.0699 255861.6228 208742.9858 1.257367241 1.303716523 1.026557666 1.038002799 1.119677012 1.136126116 0.989796419 1.159450072 1.225725606 1 17.67136819 -5.253880695 24.90377482 1.090323553 1.280541904 0.534247633 0.072258859 428.0022991 1410140.35 0.018851807 0.047776593 5.57E-06 5.253880695 0.190218352 QYTS(ph)PEEIDAQLQAEK ddPTM_A459_MK2206_30min_R2 2 QYTSPEEIDAQLQAEK 16 0 Q13442;F8WBW6 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 QYT(0.189)S(0.811)PEEIDAQLQAEK;QYT(0.026)S(0.974)PEEIDAQLQAEK 179.74 2.82E-09 2387900 43662 51166 45638 48578 53890 42901 50986 43002 42906 51626 TRUE FALSE 47004.79629 48625.17084 47159.54814 44609.02201 51774.00782 44533.62762 44291.47695 48622.50905 46637.88632 49941.44785 0.941198109 0.973643595 0.944296775 0.893226447 1.03669417 0.891716791 0.8868681 0.973590297 0.933851307 1 15.60795003 -10.61811213 4.348371967 1.000006757 0.941920381 0.138844993 0.043571722 60980968.94 1.300767996 4125.686479 0.010377976 2.41E-11 10.61811213 -0.058086376 QYYTLLNQAPDMLHR ddPTM_A459_MK2206_30min_R1 1 QYYTLLNQAPDMLHR 15 0 Q13283;E5RH00;E5RI46;E5RIF8;E5RH42;E5RJU8;Q13283-2 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 0 103.66 0.01497 0 1846.6 2229.3 2428 2183.6 2656.7 1861.6 2372.3 2176.7 1932 2190 FALSE TRUE 1689.536973 2084.172165 2263.194125 2351.78125 2550.878013 1967.002183 2214.048196 2157.669341 2132.838314 2461.313734 0.686437064 0.846772249 0.91950656 0.955498366 1.036388811 0.799167598 0.899539203 0.876633203 0.866544677 1 11.26521285 -4.788863939 2.361649359 0.914984079 0.63389822 0.547409662 0.064193361 0.4555164 3.140734159 0.01737108 0.266221797 1.63E-05 4.788863939 -0.281085859 QYYTLLNQAPDMLHR ddPTM_A459_MK2206_30min_R2 1 QYYTLLNQAPDMLHR 15 0 Q13283;E5RH00;E5RI46;E5RIF8;E5RH42;E5RJU8;Q13283-2 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 0 89.506 0.023218 1854500 13069 10817 10993 15378 12871 10624 12660 8334.2 10115 11669 FALSE TRUE 14069.57269 10279.84351 11359.50113 14121.56821 12365.61987 11028.30376 10997.72679 9423.508556 10994.78442 11288.24149 1.246391894 0.910668285 1.006312732 1.250998061 1.095442535 0.9769727 0.974263955 0.834807491 0.974003296 1 13.46253314 -6.880994452 3.234534676 0.935694503 1.094556382 0.345311422 0.103211528 0.304255295 6.308195233 0.039976352 0.034889278 1.32E-07 6.880994452 0.158861879 RAAEDDEDDDVDTK ddPTM_A459_MK2206_30min_R1 3 RAAEDDEDDDVDTK 14 1 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 0 ;; 373.94 8.99E-212 23276900 13590.3 14177.5 15124.9 13693.1 11173.1 9850.7 10499.45 13079.2 10327.5 10844 FALSE TRUE 12434.37362 13254.54217 14098.26393 14747.74493 10728.05177 10408.43812 9799.050848 12964.84993 11401.08058 12187.43659 1.020261605 1.087557837 1.156786649 1.210077675 0.880254981 0.854030136 0.804028868 1.063788094 0.935478146 1 13.57310709 -6.271031683 24.9606105 0.916729382 1.119171129 0.576659791 0.082058635 497.6493506 1294955.762 0.027049015 0.031051698 5.36E-07 6.271031683 0.202441747 RAAEDDEDDDVDTK ddPTM_A459_MK2206_30min_R2 4 RAAEDDEDDDVDTK 14 1 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 0 ;;; 214.58 1.46E-06 122561500 645600 771160 739113 738717 771688 549009 868891 586587 665153 758997 FALSE TRUE 695027.6324 732865.3158 763754.6585 678361.4581 741387.6517 569901.9222 754804.568 663255.935 723006.8056 734230.99 0.946606234 0.998139994 1.040210327 0.923907418 1.009747153 0.77618887 1.02802058 0.90333416 0.984713006 1 19.48587448 -4.398191203 14.99569057 0.95938053 0.000556685 0.002408362 0.074521408 2656499.349 2325700.94 0.017970225 86146234.86 4.00E-05 4.398191203 -0.958823844 RAAEDDEDDDVDTKK ddPTM_A459_MK2206_30min_R1 5 RAAEDDEDDDVDTKK 15 2 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 0 ;;;; 145.83 0.00022527 72109300 21867.5 26243.8 26599 24896.8 18768.8 15573.7 17362 19143.1 15126.7 17740.7 FALSE TRUE 20007.55429 24535.32385 24793.53399 26814.35585 18021.19895 16455.46944 16203.81266 18975.73389 16699.1746 19938.55185 1.003460755 1.230546934 1.24349723 1.344849719 0.903836903 0.825309158 0.81268754 0.951710738 0.837531969 1 14.28327301 -6.326629883 7.593621059 0.877968008 1.209703904 0.723652548 0.095871337 0.14961466 15.65100804 0.029952321 0.034029335 4.71E-07 6.326629883 0.331735896 RAAEDDEDDDVDTKK ddPTM_A459_MK2206_30min_R2 4 RAAEDDEDDDVDTKK 15 2 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA "Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1" 0 ;;; 94.547 0.0072275 177974000 190859 220191 218229 210303 215534 138185 249060 182199 169142 200621 FALSE TRUE 205471.3118 209256.6351 225504.6459 193120.5722 207071.0522 143443.727 216358.1228 206013.0349 183853.6654 194074.7532 1.05872252 1.07822698 1.161947354 0.995083436 1.066965428 0.739115854 1.114818488 1.061513832 0.947334274 1 17.56625293 -5.837055294 9.325202246 0.989592157 1.097336856 0.207745588 0.098755237 0.516726623 58.82229001 0.028158315 0.041865533 1.46E-06 5.837055294 0.107744699 RAAEEAEEAR ddPTM_A459_MK2206_30min_R1 2 RAAEEAEEAR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 155.26 0.00071482 6177700 3324.5 3109.1 2992 3528.5 2457.2 2544.2 3544 4241.9 274.838 1595.74 FALSE TRUE 3041.733817 2906.697025 2788.911376 3800.265681 2359.324521 2688.250405 3307.586226 4204.813516 303.4083936 1793.432318 1.696040484 1.620745313 1.555069209 2.118990297 1.315535856 1.498941654 1.84427714 2.344562141 0.169177499 1 10.80850759 -8.267498471 24.9984802 0.584588703 1.731201528 0.652261357 0.339954884 318.4897759 1313998.484 0.293427341 0.083549743 5.40E-09 8.267498471 1.146612825 RAAEEAEEAR ddPTM_A459_MK2206_30min_R2 1 RAAEEAEEAR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 165.63 0.00047448 4370400 19356 28612 23701 34257 31819 32154 23755 24023 34277 22733 FALSE TRUE 20837.91024 27191.16969 24491.17951 31458.09352 30569.62618 33377.643 20635.93997 27162.88858 37258.3515 21991.22407 0.947555724 1.236455488 1.113679686 1.43048397 1.390082975 1.517771039 0.938371593 1.23516947 1.694237273 1 14.42464029 -4.126616728 1.040582559 1.310215219 0.042706531 0.18158644 0.219986555 10.62423484 3.556110439 0.069100343 20.78002593 7.47E-05 4.126616728 -1.267508688 RAAS(ph)AATAAPTATPAAQESGTIPK ddPTM_A459_MK2206_30min_R1 2 RAASAATAAPTATPAAQESGTIPK 24 1 B8ZZ81;O00116 B8ZZ81 AGPS "Alkyldihydroxyacetonephosphate synthase, peroxisomal" 1 RAAS(0.835)AAT(0.162)AAPT(0.003)AT(0.001)PAAQESGTIPK;RAAS(0.961)AAT(0.035)AAPT(0.004)ATPAAQESGTIPK 103.05 1.24E-06 14188300 6406 5761.5 6807.4 5359.4 6540.5 5732.6 5612.4 5673.8 5234.4 4420 TRUE FALSE 5861.136061 5386.425303 6345.332655 5772.181917 6279.978035 6057.174858 5238.007036 5624.194565 5778.534611 4967.582969 1.179876833 1.084315116 1.277348097 1.161969906 1.264191876 1.219340451 1.054437755 1.132179291 1.163248736 1 12.27832835 -8.953553924 0.500284565 0.993861985 1.191572481 0.407654732 0.065035628 1.873285967 0.89715971 0.104889552 0.035958495 1.11E-09 8.953553924 0.197710496 RAAVAASSSS(ph) ddPTM_A459_MK2206_30min_R2 2 RAAVAASSSS 10 1 P61927 P61927 RPL37 60S ribosomal protein L37 1 RAAVAASS(0.003)S(0.367)S(0.63);RAAVAASS(0.006)S(0.42)S(0.575) 99.013 0.034025 14975100 37254 33677 33609 50590 67464 50458 53288 130944 92291 59578 TRUE FALSE 40106.19488 32004.64915 34729.50729 46456.63517 64815.02438 52378.21455 46291.22159 148058.8304 100318.3044 57633.97474 0.69587765 0.555308727 0.602587405 0.806063357 1.124597508 0.908807952 0.803193287 2.568950538 1.740610548 1 15.8146319 -7.732749789 24.33071458 1.866084946 0.787948274 0.574833108 0.385399061 93.1021478 78956.93459 0.17601154 0.10159305 1.85E-08 7.732749789 -1.078136672 RADDDRFPR ddPTM_A459_MK2206_30min_R1 1 RADDDRFPR 9 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 128.38 0.01748 14219000 2793 2817.7 3345.3 2891.9 3544.8 3054.1 3701.9 2692.1 2199.2 2091.3 FALSE TRUE 2555.440683 2634.267218 3118.230357 3114.634639 3403.60311 3227.020503 3454.953005 2668.563254 2427.81471 2350.386033 1.087242967 1.120780664 1.326688601 1.325158759 1.44810387 1.372974677 1.469951301 1.135372325 1.032942962 1 11.19868201 -7.966185101 6.74507817 1.037385151 1.309710791 0.508707803 0.116645983 0.159910984 22.16566277 0.074230272 0.034573612 1.08E-08 7.966185101 0.27232564 RADLNQGIGEPQS(ph)PSR ddPTM_A459_MK2206_30min_R1 3 RADLNQGIGEPQSPSR 16 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 RADLNQGIGEPQS(0.5)PS(0.5)R;RADLNQGIGEPQS(0.751)PS(0.249)R;RADLNQGIGEPQS(0.5)PS(0.5)R 160.52 2.75E-05 302313000 13351.8 12991.7 12499.1 10239.4 11597.3 10520.4 14017.8 11580.7 14307 15965.6 TRUE FALSE 12216.1593 12145.93797 11650.69592 11028.04036 11135.35498 11116.05596 13082.69814 11479.45116 15794.26385 17943.53906 0.680811029 0.676897569 0.649297548 0.614596726 0.620577409 0.619501867 0.729103556 0.639754015 0.880220106 1 14.13117685 -8.413114405 2.731625643 0.999346918 0.651900121 0.919763158 0.034609289 0.065094966 0.960378742 0.034510409 0.009379739 3.86E-09 8.413114405 -0.347446797 RADLNQGIGEPQS(ph)PSR ddPTM_A459_MK2206_30min_R2 4 RADLNQGIGEPQSPSR 16 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 RADLNQGIGEPQS(0.96)PS(0.04)R;RADLNQGIGEPQS(0.631)PS(0.369)R;RADLNQGIGEPQS(0.988)PS(0.012)R;RADLNQGIGEPQS(0.963)PS(0.037)R 243.37 1.61E-21 516397000 332823 305134 318241 345103 352874 367553 445351 352946 322857 384139 TRUE FALSE 358304.1848 289981.4893 328850.9961 316906.981 339018.3937 381540.487 386875.8787 399077.254 350938.5183 371604.5759 0.964208215 0.780349619 0.884948726 0.852806993 0.912309524 1.02673786 1.041095573 1.07392987 0.944386967 1 18.50340874 -6.648087554 3.33889956 1.024088699 0.866215371 0.639900292 0.052356037 0.141357994 3.102690632 0.017521653 0.017354882 2.25E-07 6.648087554 -0.157873328 RADLNQGIGEPQS(ph)PSRR ddPTM_A459_MK2206_30min_R1 1 RADLNQGIGEPQSPSRR 17 2 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 RADLNQGIGEPQS(0.561)PS(0.439)RR 51.147 0.038643 17237000 1997.2 1908.1 2444.2 2121.1 2736.3 2100.1 2067 2461.7 1300.2 1315.8 TRUE FALSE 1827.327652 1783.882343 2278.294514 2284.46749 2627.307377 2219.005847 1929.114201 2440.177616 1435.360443 1478.811238 1.235673361 1.206294825 1.540625643 1.544799925 1.776634711 1.50053353 1.304503342 1.650094045 0.970617754 1 10.5302222 -8.273880012 24.45243526 0.985308685 1.471695669 0.564134082 0.170373153 504.3953894 991390.6874 0.17197481 0.045741723 5.32E-09 8.273880012 0.486386984 RADLNQGIGEPQS(ph)PSRR ddPTM_A459_MK2206_30min_R2 1 RADLNQGIGEPQSPSRR 17 2 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 RADLNQGIGEPQS(0.824)PS(0.176)RR 97.589 0.0062517 72829000 30538 49978 33789 43799 52756 52825 46488 46464 49115 44410 TRUE FALSE 32876.01276 47496.16519 34915.5084 40220.48159 50684.53436 54835.29239 40384.06976 52537.00433 53386.93392 42960.90534 0.765254189 1.105567139 0.812727481 0.93621122 1.179782734 1.276399833 0.940019058 1.222902635 1.242686426 1 15.39073678 -6.224965675 6.283460993 1.151309521 0.911129644 0.450030513 0.129110626 0.190684455 22.9137619 0.037396185 0.047729038 5.96E-07 6.224965675 -0.240179876 RADLNQGIGEPQSPS(ph)R ddPTM_A459_MK2206_30min_R1 2 RADLNQGIGEPQSPSR 16 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 RADLNQGIGEPQS(0.332)PS(0.668)R;RADLNQGIGEPQS(0.108)PS(0.892)R 194.7 2.02E-13 108720000 5097.31 4474.08 3992.55 3304.75 4055.53 3840.27 4222.59 4124.45 3110.07 3283.19 TRUE FALSE 4663.757017 4182.816579 3721.54683 3559.282418 3893.989652 4057.702769 3940.908726 4088.390368 3433.372906 3689.936364 1.263912587 1.133574177 1.00856667 0.964591816 1.055299948 1.099667411 1.068015363 1.107983977 0.930469408 1 11.84938022 -4.915562462 2.743001004 1.036158587 1.276588938 0.645889061 0.054206854 0.222823356 2.797426025 0.014633623 0.107000972 1.21E-05 4.915562462 0.240430351 RADLNQGIGEPQSPSR ddPTM_A459_MK2206_30min_R1 2 RADLNQGIGEPQSPSR 16 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 0 ; 135.57 0.00055755 7750300 1466.51 1280.41 1789.3 1416.97 1717.76 1898.6 1538.93 1556 1306.77 1456.94 FALSE TRUE 1341.775624 1197.055076 1667.847301 1526.105275 1649.337982 2006.097091 1436.270788 1542.396056 1442.613418 1637.436727 0.819436624 0.731054249 1.018572061 0.9320087 1.007268223 1.2251448 0.877145825 0.941957653 0.881019336 1 10.67722344 -5.263495213 24.99748296 0.986888396 0.775245427 0.438249864 0.095155239 159.3156555 1937194.172 0.025757829 0.05829088 5.45E-06 5.263495213 -0.21164297 RADNCS(ph)PVAEEETTGSAESTLPK ddPTM_A459_MK2206_30min_R1 1 RADNCSPVAEEETTGSAESTLPK 23 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 RADNCS(0.974)PVAEEET(0.017)T(0.006)GSAES(0.002)TLPK 68.291 0.0016716 21951000 3764.8 3798.7 4256.9 3808.4 3270.6 3469.2 3834.4 3854 3271.9 3246.7 TRUE FALSE 3444.58399 3551.40394 3967.953488 4101.723628 3140.325076 3665.623106 3578.614172 3820.304884 3612.025714 3648.925707 0.943999485 0.973273841 1.087430605 1.124090748 0.860616337 1.004575977 0.980730894 1.046967023 0.989887436 1 11.83325606 -11.88183992 0.240328165 0.996569184 1.00369513 0 0.070033814 2818.229889 86.51892747 5.982459481 0.12459989 1.31E-12 11.88183992 0.007125946 RADNCS(ph)PVAEEETTGSAESTLPK ddPTM_A459_MK2206_30min_R2 4 RADNCSPVAEEETTGSAESTLPK 23 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 RADNCS(1)PVAEEETTGSAESTLPK;RADNCS(0.968)PVAEEET(0.013)T(0.014)GS(0.003)AES(0.001)T(0.001)LPK;RADNCS(1)PVAEEETTGSAESTLPK;RADNCS(1)PVAEEETTGSAESTLPK 107.17 9.98E-06 73100500 241330 253730 241173 269808 261289 231899 292669 235844 215049 268027 TRUE FALSE 259806.4104 241130.1372 249213.5874 247763.8233 251029.481 240724.0789 254241.2087 266669.6206 233753.5733 259281.3009 1.00202525 0.92999432 0.961170692 0.95557922 0.968174257 0.928428229 0.980561297 1.028495382 0.901544278 1 17.98415864 RADVQHLEDDR ddPTM_A459_MK2206_30min_R2 1 RADVQHLEDDR 11 1 Q53EZ4;Q53EZ4-2;H0Y432 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 0 84.821 0.024119 2930100 6592.7 4490.2 5963.7 5339.9 7580.9 7356.1 5036.2 10029 10128 8228.7 FALSE TRUE 7097.442181 4267.223197 6162.526781 4903.613089 7283.235775 7636.04154 4374.94089 11339.82473 11008.91513 7960.198193 0.891616265 0.536069969 0.774167506 0.616016457 0.914956588 0.959277816 0.549602005 1.424565628 1.382995105 1 12.95858864 -7.766489431 24.99998439 1.302835384 0.750984918 0.646912348 0.175641887 72.83683686 360565.5215 0.090207169 0.045437241 1.71E-08 7.766489431 -0.551850466 RAEDGS(ph)VIDYELIDQDAR ddPTM_A459_MK2206_30min_R1 2 RAEDGSVIDYELIDQDAR 18 1 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;H0YM50;H0YNP5;H0YN28;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 1 RAEDGS(1)VIDYELIDQDAR;RAEDGS(1)VIDYELIDQDAR 184.12 2.56E-10 36290000 7095.1 7964.7 8337.7 7150.2 8903.1 7612.2 8342.3 7545 6465.3 5715.4 TRUE FALSE 6491.624487 7446.196582 7771.760154 7700.909643 8548.470674 8043.196186 7785.800388 7479.03486 7137.391071 6423.466901 1.010610716 1.159217709 1.209901175 1.198871227 1.330818825 1.252158112 1.212086947 1.164329945 1.111143123 1 12.64913645 -8.521214384 1.627937896 1.001532238 1.202047736 0.383717818 0.076301501 0.435835726 2.574202279 0.07802807 0.022645641 3.01E-09 8.521214384 0.200515498 RAEDGS(ph)VIDYELIDQDAR ddPTM_A459_MK2206_30min_R2 2 RAEDGSVIDYELIDQDAR 18 1 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;H0YM50;H0YNP5;H0YN28;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 1 RAEDGS(0.999)VIDY(0.001)ELIDQDAR;RAEDGS(1)VIDYELIDQDAR 115.83 0.00054121 8724100 18900.6 24030.8 17234.2 22111 20574.7 19819.5 25969.1 19920.9 23397.2 18497.8 TRUE FALSE 20347.64447 22837.46542 17808.77963 20304.46057 19766.8339 20573.74496 22559.32598 22524.63003 25432.24616 17894.2183 1.1371072 1.276248285 0.995225347 1.134693912 1.104649198 1.149742594 1.260704748 1.258765801 1.42125494 1 14.1272059 -7.213790201 4.365420115 1.257397048 1.130512915 0.148809072 0.115539885 0.344531005 14.46118329 0.0449057 0.033340216 6.11E-08 7.213790201 -0.126884132 RAEDGSVIDYELIDQDAR ddPTM_A459_MK2206_30min_R1 9 RAEDGSVIDYELIDQDAR 18 1 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;H0YM50;H0YNP5;H0YN28;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 0 ;;;;;;;; 292.2 9.09E-81 428303300 13144.73 14093.53 14028.2 12777.43 16239.2 13025.07 13714.84 13552.68 13475.95 11549.41 FALSE TRUE 12026.70169 13176.03864 13076.00487 13761.54987 15592.35828 13762.53821 12799.94805 13434.19035 14876.82323 12980.2381 0.926539374 1.01508451 1.00737789 1.060192406 1.201238232 1.060268548 0.98611042 1.034972567 1.146113277 1 13.66402923 -4.909593451 1.234685644 1.07012696 0.891995306 0.322172996 0.062169088 1.521307481 2.350916238 0.020159478 0.327928526 1.23E-05 4.909593451 -0.178131654 RAEDGSVIDYELIDQDAR ddPTM_A459_MK2206_30min_R2 6 RAEDGSVIDYELIDQDAR 18 1 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;H0YM50;H0YNP5;H0YN28;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 0 ;;;;; 213.64 6.47E-12 478154000 213724 265191 260011 279793 257809 271759 303694 217155 292034 261736 FALSE TRUE 230086.8738 252022.0006 268679.637 256933.0169 247686.1233 282100.9792 263818.613 245537.9041 317434.5894 253195.5758 0.90873181 0.995364946 1.061154549 1.014761084 0.978240329 1.114162356 1.041955857 0.969755903 1.253713018 1 17.94989267 -3.043963332 0.553697137 1.06349531 2.30E-17 0.255736913 0.077857741 35.09571277 1.74502885 0.037659021 36.44738993 0.000903726 3.043963332 -1.06349531 RAEEAGS(ph)APRGR ddPTM_A459_MK2206_30min_R1 1 RAEEAGSAPRGR 12 2 P50750-2;X6RE90 P50750-2 CDK9 Cyclin-dependent kinase 9 1 RAEEAGS(1)APRGR 60.255 0.03742 1174300 722.51 689.88 770.19 515.77 779.15 681.1 792.98 654.14 244 577.47 TRUE FALSE 661.0567304 644.9686866 717.9116487 555.4946948 748.1148056 719.6632934 740.0817511 648.4209229 269.3646732 649.0113433 1.018559594 0.993771054 1.106161943 0.855909069 1.152699122 1.108860886 1.140321751 0.999090277 0.415038467 1 9.342099883 -8.033133191 22.11689422 0.707366589 1.053059457 0.439751824 0.154317892 133.5483053 89143.08434 0.096020834 0.036395106 9.27E-09 8.033133191 0.345692868 RAEFTVETR ddPTM_A459_MK2206_30min_R1 2 RAEFTVETR 9 1 P21333-2;P21333;Q60FE5;A0A087WWY3;F8WE98 P21333-2 FLNA Filamin-A 0 ; 119.22 0.0094236 11060300 5291.1 4779.2 4839.8 4182.4 5207.4 4972.2 5331.2 4387 4270.4 4111.4 FALSE TRUE 4841.06416 4468.073211 4511.28786 4504.529173 4999.978231 5253.721667 4975.565375 4348.644922 4714.323362 4620.751271 1.047679019 0.966958174 0.976310473 0.974847792 1.082070412 1.136984304 1.076787103 0.941112098 1.020250406 1 12.17391172 -4.436098977 21.5302677 1.021432691 2.986214169 0.01954506 0.058462822 2437.683646 611448.7517 0.01579577 2576.593423 3.66E-05 4.436098977 1.964781478 RAEFTVETR ddPTM_A459_MK2206_30min_R2 1 RAEFTVETR 9 1 P21333-2;P21333;Q60FE5;A0A087WWY3;F8WE98 P21333-2 FLNA Filamin-A 0 91.549 0.036627 3267500 17401 27818 23944 27375 27607 23664 29748 21085 31400 24023 FALSE TRUE 18733.23394 26436.59857 24742.28101 25138.37493 26523.01047 24564.5501 25842.05187 23840.8819 34131.11524 23239.13148 0.806107318 1.137589785 1.064681829 1.081726094 1.141308163 1.057033914 1.112005924 1.025893843 1.468691516 1 14.50426853 -4.759149867 24.94078247 1.117170108 0.806106901 0.366107171 0.12421008 63.47133719 691263.196 0.02904435 0.188426802 1.74E-05 4.759149867 -0.311063207 RAELGS(ph)WSSQEHLEWEPACQTPQPSAR ddPTM_A459_MK2206_30min_R1 1 RAELGSWSSQEHLEWEPACQTPQPSAR 27 1 B7Z896;F5H3M2;Q9BVG8-5;Q9BVG8-2;Q9BVG8;Q9BVG8-6;H3BTL6 B7Z896 KIFC3 Kinesin-like protein;Kinesin-like protein KIFC3 1 RAELGS(0.45)WS(0.45)S(0.099)QEHLEWEPACQTPQPSAR 78.645 5.99E-05 13493000 605.89 475.43 528.47 386.17 721.16 497.88 700.22 703.86 382.97 338.39 TRUE FALSE 554.3558738 444.4794206 492.5989288 415.9128803 692.4346701 526.0695353 653.5096014 697.7062262 422.781102 380.3123079 1.457633272 1.168722156 1.295248454 1.093608783 1.820700134 1.383256667 1.718349861 1.834561258 1.111668208 1 8.571040819 -6.242618411 24.98018698 1.527088839 1.250686342 0.122040846 0.276517032 1371.369613 1820154.072 0.077671386 0.100097626 5.72E-07 6.242618411 -0.276402497 RAELGSWS(ph)SQEHLEWEPACQTPQPSAR ddPTM_A459_MK2206_30min_R1 1 RAELGSWSSQEHLEWEPACQTPQPSAR 27 1 B7Z896;F5H3M2;Q9BVG8-5;Q9BVG8-2;Q9BVG8;Q9BVG8-6;H3BTL6 B7Z896 KIFC3 Kinesin-like protein;Kinesin-like protein KIFC3 1 RAELGS(0.243)WS(0.568)S(0.189)QEHLEWEPACQT(0.001)PQPSAR 55.668 0.0047499 13884000 777.85 528.13 763.2 558.15 1116.1 885.7 746.47 833.81 681.17 491.84 TRUE FALSE 711.6897728 493.748641 711.3961104 601.1388097 1071.643374 935.8475686 696.6743483 826.5200871 751.9800591 552.7728524 1.287490458 0.893221581 1.286959204 1.087496984 1.938668603 1.693005661 1.260326634 1.495225541 1.360378057 1 9.110542954 RAELGSWS(ph)SQEHLEWEPACQTPQPSAR ddPTM_A459_MK2206_30min_R2 2 RAELGSWSSQEHLEWEPACQTPQPSAR 27 1 B7Z896;F5H3M2;Q9BVG8-5;Q9BVG8-2;Q9BVG8;Q9BVG8-6;H3BTL6 B7Z896 KIFC3 Kinesin-like protein;Kinesin-like protein KIFC3 1 RAELGS(0.242)WS(0.585)S(0.172)QEHLEWEPACQTPQPSAR;RAELGS(0.184)WS(0.406)S(0.406)QEHLEWEPACQT(0.003)PQPSAR 82.148 4.48E-05 16815400 11506.9 19639.8 19518.1 20504.3 20074.6 28979.9 26276 21429.2 20894.2 22781.1 TRUE FALSE 12387.87711 18664.51609 20168.82371 18829.0331 19286.37034 30082.7504 22825.92964 24230.07002 22711.53975 22037.75457 0.562120658 0.846933658 0.915194134 0.854398892 0.875151335 1.365055151 1.035764763 1.099479983 1.03057413 1 14.42768961 -6.546554449 24.69876231 1.109337554 0.81422622 0.572664099 0.128644995 152.6826755 159279.0237 0.042430266 0.042432406 2.84E-07 6.546554449 -0.295111334 RAELPGSSS(ph)PLLAQPR ddPTM_A459_MK2206_30min_R1 1 RAELPGSSSPLLAQPR 16 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 RAELPGSS(0.005)S(0.995)PLLAQPR 194.1 6.13E-07 31406000 2201.2 2024.4 2049.5 2068.5 2323.2 2368.6 2693.7 2219.2 1914.9 1911.6 TRUE FALSE 2013.976381 1892.611192 1910.38565 2227.816228 2230.662025 2502.708085 2514.008188 2199.797768 2113.960708 2148.42344 0.937420596 0.880930247 0.889203504 1.036953976 1.038278574 1.164904478 1.170164196 1.023912571 0.98395906 1 11.06906265 -5.853014259 3.510281419 1.072886064 0.899126605 0.582702576 0.06080445 0.168614798 4.058908148 0.019226951 0.030666758 1.40E-06 5.853014259 -0.173759458 RAELPGSSS(ph)PLLAQPR ddPTM_A459_MK2206_30min_R2 3 RAELPGSSSPLLAQPR 16 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 RAELPGSS(0.004)S(0.995)PLLAQPR;RAELPGSS(0.006)S(0.994)PLLAQPR;RAELPGSS(0.008)S(0.991)PLLAQPR 171.33 4.18E-06 67034000 181500 205855 203922 235185 212293 243512 220629 178895 214743 217181 TRUE FALSE 195395.7795 195632.54 210720.6577 215969.6332 203957.3101 252779.0198 191660.1473 202277.1907 233420.958 210094.4018 0.930038011 0.931164935 1.002980831 1.027964721 0.970788886 1.203168755 0.912257279 0.962791912 1.111028928 1 17.68067819 -5.338201392 2.753914604 1.02549443 0.92686276 0.194825787 0.077029682 0.463031635 6.746536607 0.021033652 0.05778737 4.59E-06 5.338201392 -0.09863167 RAETFAGYDCTNS(ph)PTK ddPTM_A459_MK2206_30min_R1 2 RAETFAGYDCTNSPTK 16 1 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 RAETFAGYDCTNS(0.999)PT(0.001)K;RAETFAGYDCTNS(0.96)PT(0.04)K 163.96 1.44E-05 25454000 7188.6 7307.2 7469.8 6187.6 5910 5707.4 6774.6 6246.6 6695.4 6094.5 TRUE FALSE 6577.171821 6831.499952 6962.770788 6664.170024 5674.592185 6030.548056 6322.678795 6191.986635 7391.41079 6849.532671 0.960236579 0.997367307 1.01653224 0.972937913 0.828464139 0.880432045 0.923081778 0.904001329 1.079111692 1 12.74178984 -4.041261776 0.001071263 1.48669197 0.41017455 0 0.069751536 8122246.226 1222.244409 609316.2142 618955.8131 9.09E-05 4.041261776 -1.07651742 RAETFAGYDCTNS(ph)PTK ddPTM_A459_MK2206_30min_R2 2 RAETFAGYDCTNSPTK 16 1 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 RAETFAGY(0.001)DCT(0.099)NS(0.899)PT(0.002)K;RAETFAGY(0.001)DCT(0.387)NS(0.61)PT(0.002)K 116.04 0.0035059 38224000 87695 113291 108864 116342 110008 81351 115433 98312 89396 114714 TRUE FALSE 94408.99663 107665.1337 112493.4714 106836.4864 105688.5332 84446.86931 100276.5084 111161.716 97171.50249 110970.8916 0.850754601 0.970210585 1.013720534 0.962743337 0.952398703 0.760982165 0.903628934 1.00171959 0.87564857 1 16.75982177 -3.970955047 24.94213692 0.928911803 0.934922731 0 0.076638065 0 0 0.018104461 0 0.000106917 3.970955047 0.006010927 RAFS(ph)WLR ddPTM_A459_MK2206_30min_R1 2 RAFSWLR 7 1 Q9P206-2 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 RAFS(1)WLR;RAFS(1)WLR 95.483 0.012198 13192100 4893 4589.4 5356.6 4951.6 5104 4289.8 4989.9 4155.4 3518.4 3670.6 TRUE FALSE 4476.824656 4290.629226 4993.008916 5332.97309 4900.696872 4532.684769 4657.032876 4119.069776 3884.150271 4125.34164 1.085200947 1.0400664 1.210326163 1.292734895 1.187949339 1.098741672 1.128884171 0.998479674 0.941534207 1 12.01029789 -7.736802177 2.116700773 0.964755309 1.15808782 0.566044427 0.068171403 0.265759926 2.352672366 0.052677816 0.022533157 1.83E-08 7.736802177 0.193332511 RAFS(ph)WLR ddPTM_A459_MK2206_30min_R2 1 RAFSWLR 7 1 Q9P206-2 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 RAFS(1)WLR 79.489 0.047763 0 7118.7 9051.1 8292.4 8906.7 7877.2 6405.3 8299.9 7959.5 8062 5653.4 TRUE FALSE 7663.713145 8601.635536 8568.864477 8178.994119 7567.901548 6649.05818 7210.11316 8999.833979 8763.218187 5468.930021 1.401318561 1.572818724 1.566826499 1.495538266 1.383799302 1.21578776 1.318377294 1.645629757 1.602364293 1 12.41704289 -11.436071 2.564901066 0.721664504 1.464887029 0.537700501 0.129876889 9037965.449 4155909.843 15086014.38 0.037084927 3.66E-12 11.436071 0.743222525 RAGAES(ph)PTMSVDGR ddPTM_A459_MK2206_30min_R1 3 RAGAESPTMSVDGR 14 1 O75362 O75362 ZNF217 Zinc finger protein 217 1 RAGAES(0.93)PT(0.069)MS(0.001)VDGR;RAGAES(0.77)PT(0.228)MS(0.002)VDGR;RAGAES(0.921)PT(0.079)MSVDGR 192.4 7.78E-21 22143200 6259 6109.8 6737.6 6605.7 7279.5 6082.6 6149.1 7043.7 4416.81 3010.3 TRUE FALSE 5726.639183 5712.050909 6280.270484 7114.472159 6989.5421 6426.991556 5738.904759 6982.117674 4875.953205 3383.238691 1.692650063 1.688338137 1.856289508 2.102858477 2.065932303 1.899656555 1.696275458 2.06373783 1.44120875 1 11.72418925 -8.518660824 3.796988158 1.001603256 1.881657534 0.777434096 0.150986176 0.091132584 3.650899756 0.157299872 0.041338722 3.03E-09 8.518660824 0.880054279 RAGDLLEDS(ph)PK ddPTM_A459_MK2206_30min_R1 9 RAGDLLEDSPK 11 1 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK 158.65 0.00029574 1146449500 41298.2 60206 58474.7 45851.3 29607.4 28156.4 39029 34744 56533.6 62927 TRUE FALSE 37785.57122 56286.57846 54505.60028 49382.77507 28428.07456 29750.59104 36425.44662 34440.23687 62410.47003 70722.87183 0.534276539 0.795875181 0.770692689 0.698257491 0.401964369 0.420664352 0.515044789 0.486974524 0.882465155 1 16.10988924 -8.410703984 4.311193332 0.994819285 0.58327335 0.558906272 0.130655136 0.180959564 5.185864306 0.144242564 0.037804546 3.88E-09 8.410703984 -0.411545935 RAGDLLEDS(ph)PK ddPTM_A459_MK2206_30min_R2 4 RAGDLLEDSPK 11 1 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK 146.67 0.00084271 1093833000 961589 651661 777021 533229 557646 327754 785324 626292 402712 814388 TRUE FALSE 1035208.993 619300.4623 802926.4923 489662.485 535750.0161 340226.9081 682210.0155 708150.5148 437739.1618 787814.5863 1.314026182 0.786099259 1.019182059 0.62154534 0.68004582 0.431861651 0.865952506 0.898879669 0.55563729 1 19.5874966 -1.92093565 0.977272469 0.72575229 199.9991156 0.450695826 0.18230753 532.3889549 1.973256965 0.057741327 235833.4727 0.01199677 1.92093565 199.2733633 RAGDLLEDS(ph)PKRPK ddPTM_A459_MK2206_30min_R1 1 RAGDLLEDSPKRPK 14 3 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 RAGDLLEDS(1)PKRPK 178.02 0.0075716 34725000 2795.8 3544.9 3887.4 3365 2400.1 1796.5 2189.2 3199.7 1897 1333.6 TRUE FALSE 2558.002529 3314.126366 3623.534119 3624.172883 2304.498935 1898.216277 2043.162462 3171.72536 2094.199938 1498.816436 1.706681664 2.211162278 2.417597 2.418023179 1.537545812 1.266476822 1.363183918 2.116153309 1.397235771 1 10.54960799 -6.291470559 11.09661814 1.489149656 2.206315936 0.555211744 0.32369013 0.747208517 274.4942913 0.10286739 0.117310344 5.11E-07 6.291470559 0.717166279 RAGDPGEMPQS(ph)PTGLGQPK ddPTM_A459_MK2206_30min_R2 3 RAGDPGEMPQSPTGLGQPK 19 1 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9;H0YHL2 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 RAGDPGEMPQS(0.849)PT(0.151)GLGQPK;RAGDPGEMPQS(0.711)PT(0.289)GLGQPK;RAGDPGEMPQS(0.973)PT(0.027)GLGQPK 132.86 0.00038601 4817700 77170 89028 80829 84877 84283 71690 93226 68054 62600 83943 TRUE FALSE 83078.19453 84606.99898 83523.79852 77942.27759 80973.62593 74418.21319 80985.31422 76948.89146 68044.83485 81203.94678 1.023080747 1.041907473 1.028568214 0.959833613 0.997163674 0.916435914 0.997307612 0.947600388 0.837949848 1 16.30926223 -6.045280412 0.742150617 0.934475112 1.045546148 0.397449146 0.045570752 0.835066932 0.923631957 0.024642918 0.05837162 9.01E-07 6.045280412 0.111071036 RAGELTEDEVER ddPTM_A459_MK2206_30min_R1 1 RAGELTEDEVER 12 1 P62269 P62269 RPS18 40S ribosomal protein S18 0 128.35 0.0033323 16847000 3817 3629.4 3690.9 3183.5 4586.6 3671.8 3714.9 4629.9 2880.7 2481.8 FALSE TRUE 3492.344106 3393.1254 3440.371991 3428.693722 4403.90601 3879.694143 3467.085799 4589.421272 3180.159074 2789.264121 1.252066479 1.216494836 1.233433566 1.229246702 1.578877374 1.390938246 1.243010934 1.645387842 1.140142681 1 11.44566884 RAHT(ph)PTPGIYMGR ddPTM_A459_MK2206_30min_R2 2 RAHTPTPGIYMGR 13 1 Q13595;Q13595-4;Q13595-3;Q13595-2 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RAHT(0.99)PT(0.01)PGIYMGR;RAHT(0.939)PT(0.061)PGIYMGR 85.28 0.034965 20553500 10338.1 19137.6 16481.9 20476.3 20383.3 18252.4 15663.9 18080.2 16887 15682 TRUE FALSE 11129.59288 18187.25461 17031.39832 18803.32079 19582.94922 18947.00787 13607.21111 20443.34422 18355.80074 15170.29762 0.733643674 1.19887263 1.122680566 1.239482656 1.290874425 1.248954262 0.896964018 1.347590187 1.209982901 1 13.88896177 -4.760097886 24.90669335 1.181648496 0.733643104 0.510224423 0.128825454 25.90118271 480702.2596 0.031315461 0.189959794 1.74E-05 4.760097886 -0.448005393 RAHTPTPGIYMGRPT(ph)HSGGGGGGGGGGGGGGGGR ddPTM_A459_MK2206_30min_R1 1 RAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 34 2 Q13595;Q13595-4;Q13595-3 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RAHT(0.236)PT(0.236)PGIY(0.087)MGRPT(0.312)HS(0.129)GGGGGGGGGGGGGGGGR 57.222 0.00027382 542140 72.229 75.127 288.16 269.79 112.57 202.74 173.38 170.36 67.997 156.34 TRUE FALSE 66.08554426 70.23621865 268.6005021 290.5692725 108.0860985 214.2189636 161.8141365 168.8705605 75.06553148 175.7085795 0.376108807 0.399731299 1.528670386 1.653699969 0.615144114 1.219171905 0.920923366 0.961083181 0.427216085 1 7.457040827 -8.047265287 23.87609865 0.707121322 0.97995634 0.048991325 0.425938062 822.472917 415465.6132 0.303304344 0.114648568 8.97E-09 8.047265287 0.272835018 RAIS(ph)PTSSSR ddPTM_A459_MK2206_30min_R2 1 RAISPTSSSR 10 1 A0A0U1RRL2;B1AM27;O14795;O14795-2 A0A0U1RRL2 UNC13B Protein unc-13 homolog B 1 RAIS(0.984)PT(0.012)S(0.001)S(0.001)S(0.002)R 64.945 0.046281 854420 2034.2 1280.7 955.12 2028.8 2142.5 2914.9 2555.3 2227.3 2451 2676.3 TRUE FALSE 2189.939916 1217.1023 986.9632241 1863.04055 2058.374685 3025.828562 2219.786041 2518.415757 2664.18355 2588.97255 0.845872204 0.47011016 0.381218111 0.719606143 0.795054658 1.168737213 0.857400377 0.972747184 1.02905052 1 11.33816395 -6.318227828 2.321190234 0.992314703 0.562561227 0.644341315 0.139685236 0.186947308 1.977576568 0.047128039 0.05787189 4.81E-07 6.318227828 -0.429753475 RALLETAS(ph)PR ddPTM_A459_MK2206_30min_R1 4 RALLETASPR 10 1 Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2 Q96BT3 CENPT Centromere protein T 1 RALLET(0.004)AS(0.996)PR;RALLET(0.005)AS(0.995)PR;RALLET(0.022)AS(0.978)PR;RALLET(0.053)AS(0.947)PR 100.02 0.009174 17265000 8777.4 8543.4 9997 9394.8 10376.8 9186.6 9457.4 9091.4 8109.3 6763.2 TRUE FALSE 8030.836038 7987.223107 9318.431493 10118.38912 9963.470083 9706.737353 8826.514102 9011.914848 8952.290754 7601.076276 1.05653933 1.050801599 1.225935796 1.331178475 1.310797277 1.277021438 1.161218988 1.185610369 1.177766204 1 12.891988 -10.75927901 14.465453 1.000004355 1.202152129 0.300284628 0.090153501 0 0 0.099032189 0.024018834 1.74E-11 10.75927901 0.202147774 RALLETAS(ph)PR ddPTM_A459_MK2206_30min_R2 2 RALLETASPR 10 1 Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2 Q96BT3 CENPT Centromere protein T 1 RALLET(0.003)AS(0.997)PR;RALLETAS(1)PR 94.547 0.012176 18860900 52807 76496 61393 83779 81174 77554 76814 57620 68924 69812 TRUE FALSE 56849.94452 72697.31988 63439.81198 76933.9877 77986.70089 80505.37181 66728.22953 65151.13184 74918.88493 67534.04016 0.841796883 1.076454477 0.939375341 1.13918829 1.15477618 1.192071015 0.988068082 0.964715448 1.109349963 1 16.04332725 -4.110286351 1.420885113 1.070491678 3.37E-13 0.374448378 0.083570888 8.254700002 3.818211562 0.025101853 20.1222354 7.76E-05 4.110286351 -1.070491678 RALS(ph)PLPTR ddPTM_A459_MK2206_30min_R1 1 RALSPLPTR 9 1 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 RALS(1)PLPTR 71.888 0.035451 7966000 1849.5 1880.2 1752.7 1623.1 1835.4 1524.9 1868.3 1585.8 2022.9 1973.2 TRUE FALSE 1692.190313 1757.798638 1633.731607 1748.111443 1762.292131 1611.23852 1743.669116 1571.935518 2233.187694 2217.654913 0.763053937 0.792638489 0.736693341 0.788270273 0.794664725 0.726550606 0.786267108 0.708827829 1.007004147 1 11.11481917 -8.269030068 24.99930403 1.003502129 0.763866115 0.920411755 0.028388352 148.4656988 488952.8905 0.02422906 0.006730584 5.38E-09 8.269030068 -0.239636014 RALS(ph)SAGPIPIRPPIVPVK ddPTM_A459_MK2206_30min_R2 2 RALSSAGPIPIRPPIVPVK 19 2 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RALS(0.801)S(0.199)AGPIPIRPPIVPVK;RALS(0.802)S(0.198)AGPIPIRPPIVPVK 50.376 0.033606 11257300 40573 47861 42603 52168 60294 52347 54851 37409 45328 51240 TRUE FALSE 43679.30008 45484.29234 44023.36276 47905.70752 57926.55461 54339.10177 47648.99781 42298.48474 49270.54751 49568.043 0.881198801 0.917613236 0.888140021 0.966463565 1.168627025 1.096252716 0.961284629 0.853341835 0.99399824 1 15.59712268 -5.929522187 5.306708117 1.011576803 0.899833124 0.307357568 0.077994243 0.2980325 15.53152466 0.025550609 0.038303465 1.18E-06 5.929522187 -0.111743678 RALS(ph)SDSILSPAPDAR ddPTM_A459_MK2206_30min_R1 3 RALSSDSILSPAPDAR 16 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 RALS(0.631)S(0.184)DS(0.184)ILSPAPDAR;RALS(0.847)S(0.007)DS(0.146)ILSPAPDAR;RALS(0.575)S(0.007)DS(0.407)ILS(0.011)PAPDAR 268.42 4.11E-50 199512000 5948 3913.9 4940 4974.8 6346.4 5088.3 5464.3 6199.7 3537.35 2241.76 TRUE FALSE 5442.091366 3659.104399 4604.686564 5357.959958 6093.609449 5376.395149 5099.786517 6145.496677 3905.070191 2519.486153 2.160000506 1.452321694 1.82762924 2.126608218 2.418592157 2.133925262 2.024137545 2.439186526 1.549947074 1 11.29891381 -8.528768936 5.604898228 1.000376937 2.055926287 0.618775287 0.268081661 0.09433725 15.24964624 0.278779093 0.072340486 2.96E-09 8.528768936 1.055549349 RALS(ph)SDSILSPAPDAR ddPTM_A459_MK2206_30min_R2 5 RALSSDSILSPAPDAR 16 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 RALS(0.736)S(0.239)DS(0.025)ILSPAPDAR;RALS(0.722)S(0.264)DS(0.014)ILSPAPDAR;RALS(0.724)S(0.229)DS(0.047)ILSPAPDAR;RALS(0.628)S(0.261)DS(0.111)ILSPAPDAR;RALS(0.769)S(0.205)DS(0.026)ILSPAPDAR 154.72 5.43E-05 171820800 69623.2 158346 124954 168350 183616 179015 176195 132787 204692 124320 TRUE FALSE 74953.60572 150482.7679 129119.904 154595.2665 176406.3132 185827.5413 153060.3849 150142.7168 222495.7402 120263.4486 0.623245106 1.251276008 1.073642121 1.285471756 1.46683232 1.545170569 1.272709095 1.248448457 1.850069516 1 16.87583871 -4.473831251 0.870853531 1.399044503 1.62E-13 0.466734831 0.228728194 3.253825732 1.336507416 0.07750557 4.935359086 3.36E-05 4.473831251 -1.399044503 RALSSDS(ph)ILSPAPDAR ddPTM_A459_MK2206_30min_R1 1 RALSSDSILSPAPDAR 16 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 RALS(0.286)S(0.015)DS(0.699)ILSPAPDAR 228.9 6.35E-15 61091000 2004.2 1948 1734.6 2122.3 2383.9 2124 2204.8 2285.7 1605.8 939.23 TRUE FALSE 1833.732266 1821.184846 1616.860185 2285.759914 2288.944215 2244.259044 2057.721815 2265.716366 1772.728656 1055.588903 1.73716516 1.725278506 1.53171389 2.16538835 2.168404961 2.126072979 1.949359082 2.146400326 1.679374093 1 10.04383237 -8.598074282 5.452913964 1.000042471 1.942832664 0.652162863 0.208406267 0.409767102 28.68980445 0.223463852 0.058010694 2.52E-09 8.598074282 0.942790193 RALSSDS(ph)ILSPAPDAR ddPTM_A459_MK2206_30min_R2 1 RALSSDSILSPAPDAR 16 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 RALS(0.276)S(0.097)DS(0.628)ILSPAPDAR 98.882 0.0035154 6901500 9222.8 19540 11680 21384 21554 22928 26643 16305 22906 17858 TRUE FALSE 9928.904659 18569.67201 12069.40537 19636.8588 20707.68166 23800.54111 23144.7421 18436.11948 24898.32248 17275.29492 0.574745884 1.074926483 0.698651191 1.136701798 1.198687591 1.377721261 1.339759593 1.067195644 1.441267578 1 14.07642272 -5.90163742 4.310608482 1.247152967 0.813325458 0.57755738 0.173189146 0.151511491 5.065952271 0.047082253 0.071851713 1.25E-06 5.90163742 -0.433827509 RALVEFESNPEET(ph)REPGSPPSVQR ddPTM_A459_MK2206_30min_R1 2 RALVEFESNPEETREPGSPPSVQR 24 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 RALVEFESNPEET(0.953)REPGS(0.043)PPS(0.004)VQR;RALVEFESNPEET(0.773)REPGS(0.216)PPS(0.01)VQR 86.357 0.00031482 29452000 2211.96 1526.6 1823.08 2657.4 2412.6 1670.15 1562.22 2058.46 797.05 622.12 TRUE FALSE 2023.821187 1427.218063 1699.334409 2862.073408 2316.501033 1764.71245 1458.007154 2040.463101 879.9061998 699.1929224 2.894510402 2.041236427 2.430422784 4.093395852 3.313107097 2.523927793 2.085271615 2.918312008 1.258459821 1 9.449546771 -8.310265974 4.639914022 1.0398141 2.782102463 0.5732447 0.572883947 0.169674477 7.880891173 0.583833376 0.15881447 4.89E-09 8.310265974 1.742288363 RALVEFESNPEET(ph)REPGSPPSVQR ddPTM_A459_MK2206_30min_R2 3 RALVEFESNPEETREPGSPPSVQR 24 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 RALVEFES(0.001)NPEET(0.947)REPGS(0.049)PPS(0.002)VQR;RALVEFES(0.007)NPEET(0.84)REPGS(0.146)PPS(0.006)VQR;RALVEFESNPEET(0.961)REPGS(0.035)PPS(0.004)VQR 69.581 0.0035017 30421600 20036.7 48180 36347.9 45323 59903 61386 46175.4 30434.9 61717 26284.7 TRUE FALSE 21570.72516 45787.45126 37559.72084 41619.96592 57550.90723 63722.08725 40112.51451 34412.84593 67085.0331 25427.03239 0.848338289 1.800739094 1.477157077 1.636839301 2.263374913 2.506076457 1.577553916 1.353396079 2.638335141 1 14.63407547 -4.49843721 1.247114091 1.872985158 1.27E-28 0.234307562 0.499679832 4.031016916 3.431956814 0.146982128 11.4987139 3.17E-05 4.49843721 -1.872985158 RAMKCPY(ph)CDFY(ph)FMK ddPTM_A459_MK2206_30min_R2 1 RAMKCPYCDFYFMK 14 2 E5RH37;E9PBN4;F8W7M8;Q9P243-4;Q9P243-2;Q9P243 E5RH37 ZFAT Zinc finger protein ZFAT 2 RAMKCPY(1)CDFY(1)FMK 56.951 0.040917 0 8392.7 8221.8 9673.3 9368.9 7336.3 6885 10594 9497.6 6837.6 6802.3 TRUE FALSE 9035.251565 7813.517368 9995.802994 8603.4309 7048.24 7147.0135 9202.995074 10738.96893 7432.322088 6580.341508 1.373067272 1.187403018 1.519040156 1.307444437 1.071105503 1.086115894 1.398558884 1.631977446 1.129473612 1 12.68394674 -6.004236773 24.95341582 1.247586189 1.354368234 0.091472873 0.189304216 609.6582379 3590763.359 0.056886858 0.08216321 9.90E-07 6.004236773 0.106782046 RAMLDSGIYPPGS(ph)PGK ddPTM_A459_MK2206_30min_R2 1 RAMLDSGIYPPGSPGK 16 1 O95295 O95295 SNAPIN SNARE-associated protein Snapin 1 RAMLDSGIYPPGS(1)PGK 63.488 0.03153 4966600 20773 18056 19710 23757 24175 19744 27083 20366 20877 27354 TRUE FALSE 22363.39685 17159.3653 20367.12156 21815.97711 23225.76803 20495.37176 23526.96957 23027.90613 22692.84372 26461.44122 0.845131475 0.648466769 0.769690562 0.824444025 0.877721203 0.774537244 0.889103861 0.870243837 0.857581548 1 14.69160402 -8.539681916 0.046617984 1.565349132 0.212054218 0.565840433 0.057689023 47.30889719 1.444219578 21.94932819 19.33392422 2.89E-09 8.539681916 -1.353294914 RAPDQAAEIGSR ddPTM_A459_MK2206_30min_R1 1 RAPDQAAEIGSR 12 1 M0QXC3;M0R2Z3;M0R303;M0R2D2;M0R1Y4;M0R003;Q3ZCQ8;Q3ZCQ8-2 M0QXC3 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 0 84.892 0.043305 1583200 998.54 901.19 898.33 776.96 879.06 1074.2 1062.6 1033 352.64 834.37 FALSE TRUE 913.6089295 842.5223672 837.3538625 836.8015938 844.0451788 1135.020276 991.7158928 1023.96859 389.2981899 937.7380548 0.9742688 0.898462383 0.892950711 0.892361774 0.900086303 1.210380948 1.057561744 1.091955888 0.415145987 1 9.87304117 RAPFDLFENK ddPTM_A459_MK2206_30min_R1 2 RAPFDLFENK 10 1 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ; 155.33 0.00071321 25786000 14867.6 15518 16173 14607.8 14324.2 14446.2 13908.3 13407.8 13739.8 12277 FALSE TRUE 13603.03255 14507.77538 15075.22182 15732.89529 13753.63678 15264.13136 12980.50268 13290.57702 15168.10138 13797.96745 0.985872202 1.051442934 1.092568299 1.140232817 0.99678716 1.106259412 0.940754697 0.963227162 1.099299693 1 13.75216814 -7.253709725 24.95776945 0.997755984 1.063659984 0.209386245 0.058261069 899.9297345 2905733.432 0.02271122 0.017258383 5.58E-08 7.253709725 0.065904 RAPFDLFENK ddPTM_A459_MK2206_30min_R2 2 RAPFDLFENK 10 1 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ; 174.77 9.96E-05 10788100 68442 76269 76999 90046 76901 69257 89146 79456 64312 83699 FALSE TRUE 73681.97214 72481.59237 79566.10823 82688.95376 73881.48034 71892.62367 77441.02312 89841.17201 69905.74151 80967.90848 0.910014517 0.89518914 0.982686965 1.021255894 0.912478558 0.88791504 0.956440948 1.109589882 0.863375908 1 16.30506259 -5.257123242 24.34982805 0.967461068 0.902601821 0.127944137 0.0669334 522.684528 2948718.616 0.017313408 0.042517289 5.53E-06 5.257123242 -0.064859248 RAPFDLFENR ddPTM_A459_MK2206_30min_R1 2 RAPFDLFENR 10 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 166.69 0.00043096 142835000 9581 11571.3 11475.8 9840.1 9033.5 8990.5 8925.4 7662.5 8842.6 8076.4 FALSE TRUE 8766.085638 10818.00627 10696.85467 10597.98621 8673.676566 9499.534341 8330.002851 7595.50757 9761.819914 9076.965406 0.965750694 1.191808692 1.178461544 1.167569307 0.955570081 1.046553988 0.917707899 0.836789305 1.075449721 1 13.14799434 -6.266403803 24.84935452 0.964863202 1.13436007 0.433060529 0.085806485 342.1503328 1712626.041 0.026427401 0.030927068 5.41E-07 6.266403803 0.169496868 RAPFDLFENR ddPTM_A459_MK2206_30min_R2 2 RAPFDLFENR 10 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 155.26 0.00071482 39337000 63783 79556 58201 79402 80300 74477 78002 68766 60983 64548 FALSE TRUE 68666.27552 75605.36473 60141.39229 72914.60261 77147.01852 77311.27442 67760.2437 77753.95231 66287.19111 62441.80405 1.099684363 1.210813267 0.963159108 1.167720948 1.235502717 1.23813326 1.085174343 1.245222708 1.061583536 1 15.9302246 -4.483136915 18.26849836 1.14315716 0.868354189 0.003505751 0.098008061 28589528.14 336842564.1 0.023756655 271071026.4 3.29E-05 4.483136915 -0.274802971 RAPPGGCEER ddPTM_A459_MK2206_30min_R2 1 RAPPGGCEER 10 1 Q5RKV6 Q5RKV6 EXOSC6 Exosome complex component MTR3 0 92.943 0.04005 0 715.93 783.31 0 1058.2 438.24 644.03 0 548.5 535.59 0 FALSE TRUE 770.7421513 744.4119644 0 971.741675 421.0324956 668.5390129 0 620.1908333 582.1746501 0 0 RAPQASGPS(ph)TPGYR ddPTM_A459_MK2206_30min_R2 1 RAPQASGPSTPGYR 14 1 Q2QGD7-2;Q2QGD7 Q2QGD7-2 ZXDC Zinc finger protein ZXDC 1 RAPQASGPS(0.5)T(0.5)PGYR 66.738 0.035058 2096000 5786.7 6870.7 5508.6 7844.9 8150.9 7391.2 6456.2 6914.2 7216.8 6409.6 TRUE FALSE 6229.734201 6529.511029 5692.253975 7203.946575 7830.854711 7672.477295 5608.493185 7817.90968 7844.504219 6200.455277 1.00472206 1.053069611 0.918038067 1.161841551 1.262948342 1.237405473 0.904529254 1.260860587 1.265149714 1 12.59815844 -5.780876565 24.32142099 1.164331253 0.998055917 0.287900951 0.117698469 216.6828439 271130.7747 0.033639722 0.049989051 1.66E-06 5.780876565 -0.166275336 RAPS(ph)PDGFSPYSPEETNR ddPTM_A459_MK2206_30min_R2 2 RAPSPDGFSPYSPEETNR 18 1 Q13233 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 1 RAPS(0.997)PDGFS(0.003)PYSPEETNR;RAPS(1)PDGFSPYSPEETNR 95.361 0.0020637 12283000 14055.4 15586.5 16870.4 12555.8 13702.1 17400.9 19222.8 14365.1 15398.1 15994.3 TRUE FALSE 15131.49223 14812.49707 17432.85072 11529.95098 13164.08671 18063.10344 16698.82327 16242.66789 16737.3989 15472.4073 0.977966255 0.957349221 1.126705779 0.745194381 0.850810507 1.167439759 1.079264716 1.049782854 1.081757905 1 13.91741006 -6.760066387 24.99978728 1.078986451 0.933518215 0.34788545 0.098536755 45.7224934 832533.6067 0.035168122 0.033370052 1.74E-07 6.760066387 -0.145468236 RAPS(ph)PGAYK ddPTM_A459_MK2206_30min_R1 2 RAPSPGAYK 9 1 P54259 P54259 ATN1 Atrophin-1 1 RAPS(1)PGAYK;RAPS(1)PGAYK 77.74 0.027334 47093000 9596.2 10026.1 9787.9 9296.3 9691.6 9040 10676 10498.8 8779.9 8077 TRUE FALSE 8779.992798 9373.399068 9123.524619 10012.30264 9305.56305 9551.836988 9963.823519 10407.0101 9692.602024 9077.639738 0.967210977 1.032581083 1.005054715 1.102963207 1.025108213 1.052237945 1.097622709 1.146444494 1.067744734 1 13.14810152 -4.313830854 0.560394243 1.08102257 0.838848844 0.338144271 0.042265726 6.861678831 1.118080241 0.022297313 1.210329515 4.85E-05 4.313830854 -0.242173726 RAPS(ph)PGAYK ddPTM_A459_MK2206_30min_R2 1 RAPSPGAYK 9 1 P54259 P54259 ATN1 Atrophin-1 1 RAPS(1)PGAYK 67.879 0.041567 18846000 97854 112010 117650 128840 136850 115410 136200 109450 113300 138590 TRUE FALSE 105345.7775 106447.7463 121572.3923 118313.3599 131476.5814 119802.0084 118316.7764 123755.4908 123154.6292 134067.8196 0.78576483 0.793984317 0.906797713 0.882488879 0.980672183 0.893592577 0.882514363 0.923081252 0.918599478 1 17.03260346 -5.277518777 2.454921068 0.921526986 0.780063201 0.677373564 0.036928738 0.174668718 2.003053567 0.009847905 0.032206741 5.28E-06 5.277518777 -0.141463784 RAPS(ph)PLPK ddPTM_A459_MK2206_30min_R2 1 RAPSPLPK 8 1 Q9BSL1 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 1 RAPS(1)PLPK 70.412 0.036667 43198000 205240 216880 203770 226700 202010 194050 240360 178960 180990 211940 TRUE FALSE 220953.3322 206110.0546 210563.5901 208177.8848 194078.0724 201434.7087 208800.4433 202350.6865 196732.183 205024.4152 1.077692781 1.005295171 1.027017148 1.015380947 0.946609565 0.982491322 1.018417456 0.986958974 0.959554904 1 17.6454362 -1.522878745 0.621771073 0.985098667 7.331385841 0.571010354 0.02296628 147.9963653 1.060959181 0.010454747 1283.857651 0.03 1.522878745 6.346287174 RAPS(ph)PVVSPTEMNK ddPTM_A459_MK2206_30min_R1 5 RAPSPVVSPTEMNK 14 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 RAPS(1)PVVSPTEMNK;RAPS(1)PVVSPTEMNK;RAPS(1)PVVSPTEMNK;RAPS(1)PVVSPTEMNK;RAPS(1)PVVSPTEMNK 144.4 0.00054099 65925300 24778 24776.2 25620.9 21539.5 23683.2 23369.2 24597.6 22522.3 23554.7 24974.8 TRUE FALSE 22670.50099 23163.26488 23881.82469 23198.47602 22739.84799 24692.34391 22956.73898 22325.38991 26003.29536 28068.86677 0.807674252 0.825229784 0.850829671 0.82648424 0.810144855 0.879705765 0.817871956 0.795379097 0.926410587 1 14.7766832 -8.482454626 3.787956561 0.999303577 0.828730751 0.859041632 0.02302975 0.066609549 2.165392935 0.022398328 0.005891687 3.29E-09 8.482454626 -0.170572826 RAPS(ph)PVVSPTEMNK ddPTM_A459_MK2206_30min_R2 7 RAPSPVVSPTEMNK 14 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 RAPS(1)PVVSPTEMNK;RAPS(1)PVVSPTEMNK;RAPS(1)PVVSPTEMNK;RAPS(1)PVVSPTEMNK;RAPS(1)PVVSPTEMNK;RAPS(1)PVVSPTEMNK;RAPS(1)PVVSPTEMNK 137.27 0.00030204 132170100 531598 583236 576841 565941 473127 477587 624223 520734 507108 598421 TRUE FALSE 572297.5516 554273.3483 596072.591 519701.8099 454549.6567 495761.9079 542261.7703 588795.7217 551215.3372 578894.5718 0.988604108 0.957468554 1.02967383 0.897748632 0.785202831 0.856394121 0.93671939 1.017103546 0.952186053 1 19.1429411 -10.24162202 11.87809246 1.00000098 0.933635709 0.069409729 0.070299231 0 0 0.076785553 0.018623232 5.73E-11 10.24162202 -0.066365272 RAPS(ph)SPVAKPGPVK ddPTM_A459_MK2206_30min_R1 1 RAPSSPVAKPGPVK 14 2 Q9GZR2;A0A0C4DG31;Q9GZR2-2 Q9GZR2 REXO4 RNA exonuclease 4 1 RAPS(0.5)S(0.5)PVAKPGPVK 79.089 0.041549 32400000 2501 2438.6 2324.7 2324.7 2841.4 2737.2 2853.4 2768.9 2518.7 2076.7 TRUE FALSE 2288.276817 2279.846697 2166.905841 2503.748797 2728.221021 2892.177899 2663.054892 2744.691799 2780.527878 2333.977274 0.980419493 0.976807582 0.928417712 1.07273915 1.16891499 1.239162836 1.140994354 1.175971947 1.191326029 1 11.1885748 -5.997604016 3.272099843 1.16435673 0.963998913 0.66411746 0.060228752 0.131220929 2.934452003 0.017212889 0.025278377 1.01E-06 5.997604016 -0.200357818 RAPS(ph)VANVGSHCDLSLK ddPTM_A459_MK2206_30min_R1 1 RAPSVANVGSHCDLSLK 17 1 P21333-2;P21333;Q60FE5 P21333-2 FLNA Filamin-A 1 RAPS(1)VANVGSHCDLSLK 114.99 0.0030143 8254600 1584.8 1910.2 2003.9 1320.4 1857.9 1395.3 1903.1 1791.5 2083.9 2295.1 TRUE FALSE 1450.004438 1785.845633 1867.880851 1422.097437 1783.895909 1474.30068 1776.147671 1775.837104 2300.528862 2579.434315 0.562140478 0.692340031 0.7241436 0.551321438 0.691584158 0.571559691 0.688580307 0.688459905 0.891873404 1 11.33283899 -8.342024835 1.841466476 1.001633409 0.64029796 0.82099092 0.057549339 0.126492815 0.846023745 0.052390597 0.015204656 4.55E-09 8.342024835 -0.36133545 RAPSS(ph)PVAK ddPTM_A459_MK2206_30min_R2 1 RAPSSPVAK 9 1 Q9GZR2;A0A0C4DG31;Q9GZR2-2 Q9GZR2 REXO4 RNA exonuclease 4 1 RAPS(0.011)S(0.989)PVAK 68.515 0.040596 5267600 42679 33802 32259 31646 30461 24114 32066 33732 31362 36179 TRUE FALSE 45946.53705 32123.44183 33334.49896 29060.42057 29264.94809 25031.67517 27855.69568 38140.88822 34089.81007 34998.48219 1.312815133 0.917852427 0.95245556 0.830333739 0.836177635 0.715221735 0.795911535 1.089786923 0.974036813 1 15.09500474 -4.752641612 4.271650288 0.889866856 1.357424685 0.58246375 0.104364721 0.18485025 6.765723184 0.028656943 0.273816876 1.77E-05 4.752641612 0.467557829 RAQAEQAALR ddPTM_A459_MK2206_30min_R1 1 RAQAEQAALR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 138.25 0.002243 778310 409.49 396.38 285.01 426.31 457.17 273.7 284.71 462.74 308.42 243.57 FALSE TRUE 374.6607252 370.57559 265.6643153 459.1444701 438.9599508 289.1966575 265.7175154 458.694313 340.4813627 273.7452905 1.3686472 1.353724074 0.970479948 1.677268929 1.603534257 1.056444321 0.97067429 1.675624491 1.243788933 1 8.096690334 -6.773942743 24.99760796 1.217868491 1.384579828 0.134173615 0.25517339 636.8180063 1273163.657 0.094533225 0.083924621 1.68E-07 6.773942743 0.166711337 RAQCETLS(ph)PDGLPEEQPQTTK ddPTM_A459_MK2206_30min_R2 1 RAQCETLSPDGLPEEQPQTTK 21 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659;A0A087X146 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 RAQCET(0.018)LS(0.982)PDGLPEEQPQTTK 61.976 0.0083313 9150100 33252 52820 47429 47400 60820 49175 52257 32371 48149 40356 TRUE FALSE 35797.79869 50197.03561 49010.25919 43527.26837 58431.9012 51046.38908 45395.59313 36602.00085 52336.91299 39039.18703 0.916970906 1.285811499 1.25541188 1.114963494 1.496749949 1.307567933 1.16282117 0.937570775 1.340625074 1 15.25263539 -9.065849592 0.604689301 1.000521608 1.222270493 0.093013031 0.171460116 4.46808328 2.744337218 0.237366176 0.073378483 8.59E-10 9.065849592 0.221748884 RAQS(ph)TDSLGTSGSLQSK ddPTM_A459_MK2206_30min_R2 2 RAQSTDSLGTSGSLQSK 17 1 Q15276-2;Q15276;I3L456 Q15276-2 RABEP1 Rab GTPase-binding effector protein 1 1 RAQS(0.915)T(0.025)DS(0.045)LGT(0.014)S(0.001)GSLQSK;RAQS(0.654)T(0.343)DS(0.002)LGTSGSLQSK 152.01 0.000956 7919500 29845.3 65381 51690 68505 69989 56491 72402 52123 63284 49344 TRUE FALSE 32130.27912 62134.27461 53413.3188 62907.92236 67240.88019 58640.80459 62895.53043 58935.65507 68788.32793 47733.90932 0.67311225 1.30167999 1.118980606 1.317887499 1.40866066 1.228493652 1.317627894 1.234670613 1.441078866 1 15.54272687 -4.759772325 24.99941417 1.27292379 0.673111507 0.671124516 0.123762278 23.62719257 354209.4033 0.028829098 0.1787464 1.74E-05 4.759772325 -0.599812283 RAQVLATIHGHAGAFPAAGDAGEGAPGGGS(ph)SPER ddPTM_A459_MK2206_30min_R2 1 RAQVLATIHGHAGAFPAAGDAGEGAPGGGSSPER 34 1 Q86WR7;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 RAQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.5)S(0.5)PER 52.143 0.0033372 3428400 11908 10191 12711 9679.7 13006 10245 15745 10855 9406.5 10886 TRUE FALSE 12819.68564 9684.929759 13134.7784 8888.837546 12495.31909 10634.88065 13677.66259 12273.78577 10224.66037 10530.79071 1.217352617 0.919677356 1.24727371 0.844080733 1.18655089 1.009884343 1.298825792 1.165514168 0.970929975 1 13.36232615 RAS(ph)AAAAAGGGATGHPGGGQGAENPAGLK ddPTM_A459_MK2206_30min_R2 1 RASAAAAAGGGATGHPGGGQGAENPAGLK 29 1 Q07617 Q07617 SPAG1 Sperm-associated antigen 1 1 RAS(0.792)AAAAAGGGAT(0.208)GHPGGGQGAENPAGLK 51.264 0.010315 5777300 4679 6965.6 6723.5 6509.8 5076 6531.1 5988.3 5733.9 6947.6 7569.6 TRUE FALSE 5037.227838 6619.698433 6947.658134 5977.928516 4876.690735 6779.645587 5202.029017 6483.340417 7551.88969 7322.604572 0.687901113 0.904008726 0.948796028 0.816366425 0.665977616 0.925851658 0.710406928 0.885387208 1.031311962 1 12.83814118 -8.108927846 4.064214527 1.012553505 0.815762421 0.429003186 0.094148841 0.233624273 6.442788919 0.070406545 0.024561623 7.78E-09 8.108927846 -0.196791084 RAS(ph)AGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSK ddPTM_A459_MK2206_30min_R2 2 RASAGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSK 35 1 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 RAS(0.996)AGPAPGPVVT(0.004)AEGLHPSLPSPTGNSTPLGSSK;RAS(0.895)AGPAPGPVVT(0.083)AEGLHPS(0.016)LPS(0.004)PT(0.001)GNS(0.001)TPLGSSK 69.462 3.79E-05 14776500 23429.5 43631 30941 63381 51001 67750 53865 33203.4 62634 30571 TRUE FALSE 25223.28053 41464.34799 31972.5575 58202.56955 48998.44448 70328.27372 46792.4608 37543.19838 68081.7921 29573.47077 0.852902276 1.402079191 1.081122934 1.968066921 1.656837808 2.378086572 1.582244477 1.269489086 2.30212384 1 14.85201595 -5.753308757 24.97907208 1.764883509 1.141039059 0.318479335 0.416674571 209.5726675 643846.5873 0.10914467 0.184909058 1.76E-06 5.753308757 -0.62384445 RAS(ph)AILR ddPTM_A459_MK2206_30min_R2 1 RASAILR 7 1 P46779 P46779 RPL28 60S ribosomal protein L28 1 RAS(1)AILR 68.847 0.036623 5563900 19949 30995 20512 25508 24411 23563 25295 26823 28478 23159 TRUE FALSE 21476.31078 29455.83337 21195.85984 23423.9148 23452.50148 24459.70648 21973.73612 30328.8582 30954.96496 22403.32373 0.958621633 1.314797471 0.94610336 1.045555342 1.046831344 1.091789182 0.980824827 1.353766011 1.381713059 1 14.45142516 -7.761877131 24.99999748 1.275804667 1.061486387 0.277941876 0.137592466 13.07495151 746539.7789 0.066425064 0.034987643 1.73E-08 7.761877131 -0.21431828 RAS(ph)FAEK ddPTM_A459_MK2206_30min_R1 1 RASFAEK 7 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 RAS(1)FAEK 63.426 0.044422 39782000 6555 7112.2 5201.2 7519.8 4364.9 5036.6 8136 10037 0 4854.9 TRUE FALSE 5997.462828 6649.194487 4848.157035 8098.976299 4191.03679 5321.767939 7593.262285 9949.247567 0 5456.361665 1.09916886 1.218613225 0.888532933 1.484318085 0.768100989 0.975332697 1.39163471 1.823421573 0 1 12.41372356 -8.268297611 24.99978193 0.500000098 1.189130063 0.370298508 0.367799673 631.6964328 2302641.306 0.318795526 0.089564602 5.39E-09 8.268297611 0.689129966 RAS(ph)FAEK ddPTM_A459_MK2206_30min_R2 1 RASFAEK 7 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 RAS(1)FAEK 63.426 0.044422 301060000 246180 296830 296200 278090 341160 223820 315240 253490 275810 280240 TRUE FALSE 265027.7301 282089.8538 306075.1602 255369.1574 327764.3442 232337.6269 273848.6093 286622.0134 299799.4552 271095.7918 0.977616541 1.04055416 1.129029551 0.941988645 1.209035161 0.857031477 1.010154409 1.057272086 1.105880151 1 18.04844319 -6.761636943 25 1.00990259 1.055902443 0.078059705 0.091137864 18.1959821 2302268.187 0.030721494 0.028776233 1.73E-07 6.761636943 0.045999853 RAS(ph)FYENIIK ddPTM_A459_MK2206_30min_R2 1 RASFYENIIK 10 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 RAS(1)FYENIIK 84.468 0.01942 2287500 21709 20245 21478 20015 25745 23465 25162 20134 19358 17496 TRUE FALSE 23371.05773 19239.66274 22194.0658 18379.71048 24734.12194 24357.97702 21858.19918 22765.58293 21041.72385 16925.10695 1.380851406 1.136752801 1.311310225 1.085943535 1.461386449 1.439162369 1.291465941 1.345077641 1.243225458 1 14.04687733 -8.646292637 4.958032438 1.00000623 1.302447094 0.399471168 0.112454908 1.320158505 52.18519538 0.110905106 0.028848503 2.26E-09 8.646292637 0.302440863 RAS(ph)GDVQTMK ddPTM_A459_MK2206_30min_R2 1 RASGDVQTMK 10 1 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;X6R5W5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 RAS(1)GDVQTMK 104.7 0.0066554 6864200 41391 51029 41954 53816 46831 47056 45685 41365 43399 41799 TRUE FALSE 44559.92678 48494.97406 43352.72542 49419.06065 44992.17963 48846.74905 39686.50462 46771.54753 47173.76657 40435.10205 1.102010989 1.199328593 1.072155707 1.222182167 1.112701028 1.208028336 0.981486446 1.156706553 1.166653827 1 15.30332063 -7.220552187 24.99979072 1.089270293 1.15252671 0.208231586 0.07130398 939.441743 574406.5634 0.026070266 0.020193731 6.02E-08 7.220552187 0.063256418 RAS(ph)GLSTEGATGPSADTSGSELDGR ddPTM_A459_MK2206_30min_R1 1 RASGLSTEGATGPSADTSGSELDGR 25 1 Q7Z628 Q7Z628 NET1 Neuroepithelial cell-transforming gene 1 protein 1 RAS(0.891)GLS(0.082)T(0.027)EGATGPSADTSGSELDGR 96.598 3.48E-06 6032900 345.71 341.27 310.62 357.93 253.42 321.94 357.32 197.36 312.47 206.25 TRUE FALSE 316.3055491 319.053261 289.5359798 385.4978306 243.3257448 340.1679646 333.4838348 195.6345023 344.9523747 231.8018071 1.364551696 1.376405408 1.249066966 1.66304929 1.049714615 1.467494878 1.43865934 0.843973154 1.488134967 1 7.856748003 -8.725926176 0.347046114 0.969192803 1.399819566 0.177291305 0.219819408 3.399469781 1.012308318 0.485556728 0.221090874 1.88E-09 8.725926176 0.430626762 RAS(ph)GQAFELILS(ph)PR ddPTM_A459_MK2206_30min_R1 4 RASGQAFELILSPR 14 1 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 2 RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR 133.94 0.0016783 19028500 14786.1 14887.4 15172 12544.2 15051.4 12746.6 13657 13451.5 11290.6 11326.53 TRUE FALSE 13528.46455 13918.22755 14142.16691 13510.35646 14451.87087 13468.30148 12745.96645 13333.89495 12464.29827 12729.74605 1.062744261 1.093362546 1.110954363 1.061321758 1.135283517 1.05801808 1.001274212 1.04745962 0.979147442 1 13.63591602 -7.059507918 4.346865078 1.011786705 1.092579868 0.707198706 0.025882414 0.123136302 4.695889562 0.009589809 0.007531397 8.72E-08 7.059507918 0.080793164 RAS(ph)GQAFELILS(ph)PR ddPTM_A459_MK2206_30min_R2 4 RASGQAFELILSPR 14 1 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 2 RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR 110.38 0.0060901 3036890 22967.3 25667.1 20657.9 25241.2 24481.4 23309.8 24613.5 20610.2 17522 20432 TRUE FALSE 24725.69415 24392.50914 21346.62408 23178.91322 23520.13723 24196.87077 21381.71788 23304.02391 19046.03189 19765.30551 1.25096443 1.234107367 1.080004762 1.172707055 1.189970841 1.224209297 1.081780288 1.179036868 0.963609284 1 14.27068263 -8.259030086 24.78521558 0.981804622 1.174037416 0.666590023 0.05508147 107.5400484 1106336.483 0.04259169 0.014363803 5.51E-09 8.259030086 0.192232793 RAS(ph)GQAFELILSPR ddPTM_A459_MK2206_30min_R1 3 RASGQAFELILSPR 14 1 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR 204.78 1.02E-05 339079200 7113.69 8259.43 8035.62 9348.31 9539.45 9012.99 9271.02 8181.38 7553.36 6824.4 TRUE FALSE 6508.63331 7721.739606 7490.184503 10068.31846 9159.473506 9523.297705 8652.567172 8109.851057 8338.558802 7669.858194 0.848598911 1.006764325 0.976574053 1.312712465 1.1942168 1.241652383 1.128126095 1.057366493 1.087185524 1 12.90498419 -5.60330639 9.003213626 1.153452766 0.943558746 0.50186168 0.092546143 0.236696358 23.96287321 0.026037966 0.045172649 2.49E-06 5.60330639 -0.20989402 RAS(ph)GQAFELILSPR ddPTM_A459_MK2206_30min_R2 6 RASGQAFELILSPR 14 1 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR 157.42 0.00016091 332093300 38313.8 60996.4 60834.4 63107.5 64827.7 68796.8 68610 51007.5 61896.2 69326.6 TRUE FALSE 41247.13399 57967.40747 62862.58853 57951.41538 62282.23876 71414.91043 59601.42458 57674.35538 67279.81959 67064.47872 0.615036973 0.864353359 0.937345518 0.864114901 0.928691909 1.064869388 0.888718226 0.859983653 1.003210953 1 16.03326121 -4.325695292 1.384210084 0.941137032 5.85E-14 0.7185418 0.061749703 2.141535168 1.572582901 0.01806853 3.834976545 4.72E-05 4.325695292 -0.941137032 RAS(ph)ISEPSDTDPEPR ddPTM_A459_MK2206_30min_R1 4 RASISEPSDTDPEPR 15 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 RAS(1)ISEPSDTDPEPR;RAS(0.997)IS(0.002)EPSDT(0.001)DPEPR;RAS(0.97)IS(0.03)EPSDTDPEPR;RAS(0.996)IS(0.004)EPSDTDPEPR 284.24 2.51E-55 66337000 4716.97 4296.48 5067.73 4118.24 4845.91 3999.12 4637.14 4146.07 3638.67 3334.28 TRUE FALSE 4315.766932 4016.778371 4723.746607 4435.427558 4652.887143 4225.546718 4327.804852 4109.821347 4016.922768 3747.355779 1.151683263 1.071896721 1.260554611 1.18361528 1.241645421 1.127607563 1.15489564 1.096725689 1.071935254 1 11.87165724 -8.184836698 0.973515887 1.004028224 1.177261571 0.561899579 0.050350515 0.398528429 0.758753932 0.048915246 0.017413206 6.53E-09 8.184836698 0.173233347 RAS(ph)ISEPSDTDPEPR ddPTM_A459_MK2206_30min_R2 2 RASISEPSDTDPEPR 15 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 RAS(0.994)IS(0.006)EPSDTDPEPR;RAS(0.999)IS(0.001)EPSDTDPEPR 236.31 1.25E-19 80769000 49095 43056 49529 59215 53086 53291 45822 38068 44798 42159 TRUE FALSE 52853.75095 40917.90165 51180.27214 54376.94508 51001.5769 55319.02635 39805.51636 43043.61831 48694.44906 40783.35528 1.295963772 1.003299051 1.254930395 1.333312198 1.250548822 1.356411849 0.976023578 1.055421213 1.193978493 1 15.31569285 -7.267131704 24.98748952 1.060974257 1.24206767 0.446101164 0.104980112 506.1704629 2221916.077 0.044906948 0.031192828 5.41E-08 7.267131704 0.181093413 RAS(ph)LSDLTDLEDIEGLTVR ddPTM_A459_MK2206_30min_R1 13 RASLSDLTDLEDIEGLTVR 19 1 J3KSI3;J3KSU7;K7EN88;Q8WZ73-3;Q8WZ73-2;Q8WZ73 J3KSI3 RFFL;hCG_2039718 E3 ubiquitin-protein ligase rififylin 1 RAS(0.933)LS(0.067)DLTDLEDIEGLTVR;RAS(0.997)LS(0.003)DLTDLEDIEGLTVR;RAS(0.915)LS(0.085)DLTDLEDIEGLTVR;RAS(1)LSDLTDLEDIEGLTVR;RAS(0.983)LS(0.016)DLTDLEDIEGLTVR;RAS(0.995)LS(0.005)DLTDLEDIEGLTVR;RAS(0.762)LS(0.236)DLT(0.002)DLEDIEGLTVR;RAS(0.969)LS(0.031)DLTDLEDIEGLTVR;RAS(0.975)LS(0.025)DLTDLEDIEGLTVR;RAS(0.998)LS(0.002)DLTDLEDIEGLTVR;RAS(0.922)LS(0.078)DLTDLEDIEGLTVR;RAS(0.994)LS(0.006)DLTDLEDIEGLTVR;RAS(0.995)LS(0.005)DLTDLEDIEGLTVR 249.85 5.96E-38 81237600 15560.41 13716.05 12819.79 12182.03 17334.31 13488.94 15921.22 15403.7 14677.92 13394.49 TRUE FALSE 14236.91542 12823.13265 11949.61837 13120.29206 16643.84773 14252.67213 14859.14446 15269.02707 16203.74231 15053.90054 0.945729339 0.851814625 0.793788848 0.871554321 1.105616958 0.946776026 0.98706275 1.014290418 1.07638165 1 13.87784972 -6.164581366 7.479594981 1.016712298 0.858238836 0.663651523 0.054267028 0.171559709 11.68403293 0.016228046 0.02100944 6.85E-07 6.164581366 -0.158473462 RAS(ph)LSDLTDLEDIEGLTVR ddPTM_A459_MK2206_30min_R2 3 RASLSDLTDLEDIEGLTVR 19 1 J3KSI3;J3KSU7;K7EN88;Q8WZ73-3;Q8WZ73-2;Q8WZ73 J3KSI3 RFFL;hCG_2039718 E3 ubiquitin-protein ligase rififylin 1 RAS(0.994)LS(0.005)DLT(0.001)DLEDIEGLTVR;RAS(0.996)LS(0.004)DLTDLEDIEGLTVR;RAS(0.991)LS(0.009)DLTDLEDIEGLTVR 181.6 5.81E-11 5262300 14943.7 11092.2 16363.1 18161.6 14750.7 19317.5 17739.2 12316.9 19621.5 14602.4 TRUE FALSE 16087.80116 10541.37748 16908.63759 16677.73918 14171.5134 20052.641 15410.02173 13926.76112 21328.1426 14125.92488 1.138884802 0.746243348 1.19699331 1.180647591 1.003227294 1.419563049 1.090903559 0.985900834 1.509858135 1 13.78605771 -5.295815768 24.45260694 1.172911594 0.942563941 0.194743732 0.18774528 627.3262932 446228.5466 0.046365424 0.096525901 5.06E-06 5.295815768 -0.230347653 RAS(ph)LSEIGFGK ddPTM_A459_MK2206_30min_R1 2 RASLSEIGFGK 11 1 Q00537-2;F5H6Z0;Q00537 Q00537-2 CDK17 Cyclin-dependent kinase 17 1 RAS(0.88)LS(0.12)EIGFGK;RAS(0.994)LS(0.006)EIGFGK 127.07 0.0015595 60704000 20914 21851 21165 19318.5 21171 19142.1 20711 20711.9 17556.7 16067.1 TRUE FALSE 19135.15448 20428.49593 19728.37877 20806.41422 20327.71424 20225.90916 19329.40698 20530.81804 19381.78179 18057.61365 1.059672382 1.131295437 1.092524137 1.152223911 1.125714318 1.120076526 1.070429756 1.136961862 1.073330185 1 14.14031963 -8.58256132 4.635587457 1.000021618 1.111785318 0.599180868 0.027786237 0.203716882 13.02043504 0.025786544 0.006720457 2.61E-09 8.58256132 0.1117637 RAS(ph)LSEIGFGK ddPTM_A459_MK2206_30min_R2 2 RASLSEIGFGK 11 1 Q00537-2;F5H6Z0;Q00537 Q00537-2 CDK17 Cyclin-dependent kinase 17 1 RAS(1)LSEIGFGK;RAS(0.994)LS(0.006)EIGFGK 110.22 0.0045942 44293000 267840 268720 272710 263990 307220 285520 323280 219748 263900 253400 TRUE FALSE 288346.0363 255375.7556 281802.0153 242421.1725 295156.9991 296385.6637 280832.9477 248469.8181 286853.545 245131.5788 1.176290863 1.041790523 1.14959491 0.988943056 1.204075789 1.209088055 1.145641655 1.013618153 1.170202331 1 17.90319682 -11.17778781 2.870729438 0.987829717 1.119132004 0.190034489 0.075417267 38165594.28 33835288.77 3396379.932 0.018754933 6.64E-12 11.17778781 0.131302287 RAS(ph)LTLEEK ddPTM_A459_MK2206_30min_R1 1 RASLTLEEK 9 1 A0A0U1RQQ9;Q6P3W7 A0A0U1RQQ9 SCYL2 SCY1-like protein 2 1 RAS(0.989)LT(0.011)LEEK 87.719 0.016504 14811000 2756.6 3235.2 3187.4 3551.8 3322.1 3275.6 3375.1 3372.5 2597.2 2588.3 TRUE FALSE 2522.136695 3024.587892 2971.048169 3825.360251 3189.773722 3461.061641 3149.953237 3343.014588 2867.188234 2908.958145 0.867024058 1.03974954 1.02134442 1.315027601 1.09653476 1.189794239 1.082845844 1.149213712 0.985640938 1 11.50628682 -4.774838375 1.612183641 1.121092998 0.776445249 0.372366583 0.093001798 1.045016041 2.594434003 0.025395794 0.575040116 1.68E-05 4.774838375 -0.344647749 RAS(ph)LTLEEK ddPTM_A459_MK2206_30min_R2 2 RASLTLEEK 9 1 A0A0U1RQQ9;Q6P3W7 A0A0U1RQQ9 SCYL2 SCY1-like protein 2 1 RAS(0.909)LT(0.091)LEEK;RAS(0.973)LT(0.027)LEEK 109.16 0.0059513 17069800 55646 85505 87751 102361 102252 117709 85645 68770 87593 74019 TRUE FALSE 59906.30054 81258.94604 90676.57454 93997.77886 98237.0727 122188.4985 74399.70862 77758.47512 95211.68081 71603.76609 0.836636169 1.134841789 1.266365996 1.312749091 1.371953992 1.706453517 1.039047423 1.085955102 1.329702137 1 16.12774785 -4.763117462 1.950505469 1.281341529 0.687393651 0.310461812 0.191977424 1.02648106 4.052288734 0.053836202 1.132277057 1.73E-05 4.763117462 -0.593947878 RAS(ph)MQPIQIAEGTGITTR ddPTM_A459_MK2206_30min_R1 1 RASMQPIQIAEGTGITTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 RAS(1)MQPIQIAEGTGITTR 86.005 0.013325 4563600 446.49 376.83 446.44 334.46 551.51 690.1 597.02 548.11 490.66 420.59 TRUE FALSE 408.5136809 352.2982985 416.1368967 360.2201672 529.5421889 729.1728656 557.1938851 543.3179321 541.6658628 472.6958645 0.864220975 0.745295919 0.88034808 0.762054831 1.12025983 1.542583552 1.17875769 1.149402762 1.145907768 1 8.884768433 -6.361251543 4.650356091 1.221696504 0.813709917 0.652218143 0.134937402 0.136658345 4.870506379 0.043075162 0.049182601 4.35E-07 6.361251543 -0.407986587 RAS(ph)MQPIQIAEGTGITTR ddPTM_A459_MK2206_30min_R2 1 RASMQPIQIAEGTGITTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 RAS(1)MQPIQIAEGTGITTR 115.2 0.0042852 0 5412.6 8215.7 7548.1 6648 6177.7 6100.2 6451.6 4583.5 4385.9 5118.8 TRUE FALSE 5826.992818 7807.720285 7799.749887 6104.837134 5935.132458 6332.347386 5604.49717 5182.579188 4767.377654 4951.773975 1.176748544 1.576752155 1.57514255 1.232858601 1.19858711 1.278803802 1.131816032 1.046610611 0.962761563 1 12.27372975 -6.953298427 0.673625123 0.97421556 1.443416792 0.62727747 0.123878341 0.490838977 0.473131798 0.103737762 0.089973851 1.11E-07 6.953298427 0.469201232 RAS(ph)PAPSDSSPGEPFVGGPVSSPR ddPTM_A459_MK2206_30min_R2 1 RASPAPSDSSPGEPFVGGPVSSPR 24 1 O60346 O60346 PHLPP1 PH domain leucine-rich repeat-containing protein phosphatase 1 1 RAS(0.847)PAPS(0.141)DS(0.007)S(0.004)PGEPFVGGPVSSPR 97.408 0.00061976 0 10122 10444 7763.6 9992.8 8672.6 10338 11594 7727.1 9268.2 11182 TRUE FALSE 10896.9481 9925.366147 8022.434549 9176.356275 8332.070148 10731.41983 10071.69387 8737.058501 10074.33128 10817.13226 1.007378651 0.91755984 0.741641533 0.848316916 0.770266088 0.992076234 0.931087245 0.807705619 0.931331063 1 13.40103045 -6.767474658 24.99999026 0.920337065 0.853500411 0.157734609 0.084654796 339.6886196 1407087.568 0.030957364 0.028004535 1.71E-07 6.767474658 -0.066836654 RAS(ph)PNLFSEAQYQEAPVEK ddPTM_A459_MK2206_30min_R1 2 RASPNLFSEAQYQEAPVEK 19 1 F6VUX8;Q9HC77-2;Q9HC77 F6VUX8 CENPJ Centromere protein J 1 RAS(0.951)PNLFS(0.048)EAQYQEAPVEK;RAS(0.978)PNLFS(0.021)EAQY(0.001)QEAPVEK 105.65 0.0004389 14647000 4733.1 4785.2 4553.9 4714.4 4630.5 4797 4378.6 4232.1 3547.2 3266.2 TRUE FALSE 4330.524991 4473.68261 4244.793956 5077.503905 4446.05738 5068.601995 4086.511583 4195.099196 3915.944134 3670.841515 1.179709059 1.218707643 1.15635446 1.383198889 1.211182058 1.380773856 1.113235635 1.142816757 1.066770145 1 11.84189511 -7.434612614 8.25179883 1.088252553 1.252704842 0.540953029 0.078842074 0.270629147 23.00617046 0.032960037 0.02213157 3.68E-08 7.434612614 0.16445229 RAS(ph)PNLFSEAQYQEAPVEK ddPTM_A459_MK2206_30min_R2 2 RASPNLFSEAQYQEAPVEK 19 1 F6VUX8;Q9HC77-2;Q9HC77 F6VUX8 CENPJ Centromere protein J 1 RAS(0.986)PNLFS(0.014)EAQYQEAPVEK;RAS(0.998)PNLFS(0.002)EAQYQEAPVEK 105.24 0.0019637 11852000 73990 85042 86601 88996 91140 82409 103471 72548 83408 97723 TRUE FALSE 79654.73129 80818.93794 89488.23412 81724.74212 87561.38566 85545.13224 89885.13341 82030.27269 90662.67707 94534.30651 0.842601318 0.854916495 0.946621786 0.864498245 0.926239255 0.904910983 0.950820255 0.8677302 0.959045244 1 16.52855036 -1.522890191 0.019733241 1.621991131 1.82E-07 0.547175952 0.033784571 2534.829376 3.869917754 118.4904109 212.1474435 0.029999209 1.522890191 -1.621990949 RAS(ph)PPDPSPSPSAASASER ddPTM_A459_MK2206_30min_R1 2 RASPPDPSPSPSAASASER 19 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 RAS(1)PPDPSPSPSAASASER;RAS(0.995)PPDPS(0.001)PS(0.001)PSAAS(0.001)AS(0.002)ER 195.55 6.11E-15 16143100 2998 2834.76 3056.87 2310.01 2568.74 2433.74 2786.66 2736.39 2226.75 2142.13 TRUE FALSE 2743.004357 2650.216609 2849.378181 2487.92737 2466.421646 2571.536256 2600.766996 2712.466031 2458.228631 2407.513237 1.139351724 1.100810815 1.183535832 1.033401326 1.024468571 1.068129644 1.08027111 1.126667131 1.021065469 1 11.23332801 -1.522878745 0.127961964 0.997579464 1.453463558 0.376723438 0.044710512 109.3195438 0.953336115 0.270976375 8.964133808 0.03 1.522878745 0.455884094 RAS(ph)PPDPSPSPSAASASER ddPTM_A459_MK2206_30min_R2 3 RASPPDPSPSPSAASASER 19 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 RAS(0.975)PPDPS(0.025)PSPSAASASER;RAS(0.948)PPDPS(0.052)PSPSAASASER;RAS(1)PPDPSPSPSAASASER 110.34 0.0013937 21314000 53874 76541 65655 74669 71992 76387 69760 55701 62519 66294 TRUE FALSE 57998.63486 72740.08524 67843.90493 68568.30385 69165.23235 79293.96081 60600.4282 62981.31195 67956.78961 64130.83221 0.904379888 1.134245148 1.057898402 1.069194044 1.078502024 1.23644054 0.944949974 0.982075388 1.059658627 1 15.96873051 RAS(ph)PSPPPKR ddPTM_A459_MK2206_30min_R2 1 RASPSPPPKR 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RAS(0.994)PS(0.006)PPPKR 64.841 0.035402 896430 4466.5 4657.8 3212.8 3481.6 4388.8 3629.8 2855.9 4117.8 4933.1 4138.7 TRUE FALSE 4808.458674 4426.500425 3319.913148 3197.142143 4216.47366 3767.934583 2480.916899 4656.010599 5362.172121 4003.654558 1.201017372 1.105614973 0.829220678 0.798555943 1.05315621 0.941123798 0.619663076 1.162940142 1.339319375 1 11.96710179 -7.966815995 24.99848882 1.196817092 0.934118874 0.269563745 0.173830933 219.242736 165161.8118 0.097375636 0.046777327 1.08E-08 7.966815995 -0.262698217 RAS(ph)QEANLLTLAQK ddPTM_A459_MK2206_30min_R1 2 RASQEANLLTLAQK 14 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RAS(0.999)QEANLLT(0.001)LAQK;RAS(1)QEANLLTLAQK 129.12 0.00055392 88378000 12981.3 14171 14978.5 12580.7 13561.2 12514 13736.1 12007.5 12250.6 11677.2 TRUE FALSE 11877.17227 13248.46532 13961.80115 13549.66769 13021.02869 13222.53187 12819.78983 11902.51969 13524.09371 13123.85969 0.905006038 1.009494587 1.063848706 1.032445333 0.992164576 1.007518533 0.976830759 0.906937438 1.03049667 1 13.67990445 -7.30610967 5.423613293 0.970351526 1.005918653 0.039098399 0.047944848 0.512563364 37.66855728 0.020623331 0.013963128 4.94E-08 7.30610967 0.035567128 RAS(ph)QEANLLTLAQK ddPTM_A459_MK2206_30min_R2 3 RASQEANLLTLAQK 14 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK 140.8 0.00028724 92286000 198165 216312 219003 230656 227344 192702 242944 179467 176498 222160 TRUE FALSE 213336.6648 205570.2606 226304.4507 211810.667 218417.3322 200035.4096 211045.161 202923.9531 191849.477 214910.9374 0.992674767 0.956536987 1.053015046 0.985574162 1.016315572 0.930782826 0.982012193 0.94422348 0.892692942 1 17.71337938 -6.760250205 24.9997872 0.948460623 1.000415325 0.341675871 0.035281078 36.91806347 776126.1539 0.011785935 0.011170305 1.74E-07 6.760250205 0.051954702 RAS(ph)SASVPAVGASAEGTR ddPTM_A459_MK2206_30min_R2 4 RASSASVPAVGASAEGTR 18 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 "Pantothenate kinase 2, mitochondrial" 1 RAS(0.732)S(0.265)AS(0.003)VPAVGASAEGTR;RAS(0.662)S(0.283)AS(0.055)VPAVGASAEGTR;RAS(0.982)S(0.017)AS(0.001)VPAVGASAEGTR;RAS(0.978)S(0.022)ASVPAVGASAEGTR 95.307 0.0072422 46667900 66230 81358 67336 88867 80790 97198 68980 58132 68484 60418 TRUE FALSE 71300.61972 77317.88003 69580.94863 81606.28183 77617.77866 100896.938 59922.84314 65730.052 74440.61453 58446.56561 1.219928305 1.322881494 1.190505343 1.396254527 1.328012653 1.72631081 1.025258585 1.124617868 1.273652502 1 15.83483063 RAS(ph)SLNVLNVGGK ddPTM_A459_MK2206_30min_R2 2 RASSLNVLNVGGK 13 1 Q07866-6;Q07866-4;Q07866-7;G3V5R9;Q07866-9;H0YG16;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 RAS(0.646)S(0.354)LNVLNVGGK;RAS(0.5)S(0.5)LNVLNVGGK 148.41 0.00028089 180092000 191911 300010 283260 334300 364130 308600 347210 276960 341750 278200 TRUE FALSE 206603.8537 285111.9397 292703.747 306986.6206 349832.4266 320343.9892 301620.9099 313159.6229 371474.7973 269122.3568 0.767694874 1.059413804 1.087623305 1.140695349 1.299901022 1.190328418 1.120757538 1.163632879 1.380319352 1 18.03790272 -4.241034114 0.979088051 1.19362722 9.67E-11 0.614627162 0.098279433 3.184179361 1.170023555 0.031047246 5.169461009 5.74E-05 4.241034114 -1.19362722 RAS(ph)SPFR ddPTM_A459_MK2206_30min_R2 1 RASSPFR 7 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 RAS(0.891)S(0.109)PFR 70.816 0.033813 19966000 10024 9491.8 10138 7667.3 9241.8 10627 10748 13059 11119 12894 TRUE FALSE 10791.44515 9020.451014 10475.99586 7040.857064 8878.920496 11031.41793 9336.774689 14765.85614 12086.11052 12473.26984 0.865165693 0.723182544 0.83987567 0.564475647 0.711835839 0.884404657 0.748542669 1.183799944 0.96896088 1 13.60655209 -7.747174786 24.99662351 1.057285295 0.759085428 0.630909782 0.101034384 137.4874502 240927.655 0.04782791 0.027448261 1.79E-08 7.747174786 -0.298199867 RAS(ph)VCAEAYNPDEEEDDAESR ddPTM_A459_MK2206_30min_R1 1 RASVCAEAYNPDEEEDDAESR 21 1 P31323 P31323 PRKAR2B cAMP-dependent protein kinase type II-beta regulatory subunit 1 RAS(1)VCAEAYNPDEEEDDAESR 111.72 5.11E-05 5837600 1258.7 1069.9 1173.2 875.47 1291.5 1035.5 1499.1 1115 851.03 876.04 TRUE FALSE 1151.640955 1000.249316 1093.566453 942.8988511 1240.05682 1094.129115 1399.097774 1105.251673 939.4976139 984.570449 1.169688727 1.015924576 1.110704119 0.957675352 1.259490188 1.111275599 1.421023529 1.122572462 0.954220813 1 9.943350629 -4.448143057 21.39886138 1.118441593 3.207948219 0.011737105 0.137452253 1941.801432 613437.6808 0.033809282 20148.85202 3.56E-05 4.448143057 2.089506626 RAS(ph)VCAEAYNPDEEEDDAESR ddPTM_A459_MK2206_30min_R2 2 RASVCAEAYNPDEEEDDAESR 21 1 P31323 P31323 PRKAR2B cAMP-dependent protein kinase type II-beta regulatory subunit 1 RAS(0.924)VCAEAY(0.076)NPDEEEDDAESR;RAS(0.998)VCAEAY(0.002)NPDEEEDDAESR 121.48 3.76E-05 34650000 44936 44003 40234 45431 45440 50980 45572 41091 39972 37580 TRUE FALSE 48376.33471 41817.87501 41575.38148 41719.14197 43655.79728 52920.07962 39588.34166 46461.73479 43448.69231 36353.76768 1.330710344 1.150303742 1.14363336 1.147587847 1.200860325 1.45569725 1.088974931 1.278044554 1.195163392 1 15.14981727 -8.567146333 20.12296925 0.999999998 1.220240702 0.299172096 0.102288423 2371.4522 1078004.366 0.097869816 0.025269878 2.71E-09 8.567146333 0.220240704 RAS(ph)WASENGETDAEGTQMTPAK ddPTM_A459_MK2206_30min_R1 2 RASWASENGETDAEGTQMTPAK 22 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 RAS(0.749)WAS(0.251)ENGETDAEGTQMTPAK;RAS(0.729)WAS(0.242)ENGET(0.027)DAEGT(0.002)QMTPAK 169.8 3.71E-12 42276000 9734.5 9931.6 9524.2 7424.9 9323.3 7501.4 8790.7 7413.1 7075.4 6375.4 TRUE FALSE 8906.529657 9285.051035 8877.72384 7996.767085 8951.933219 7926.122785 8204.288443 7348.288048 7810.91315 7165.232684 1.243020297 1.295847803 1.239000076 1.116051277 1.249356945 1.10619196 1.14501354 1.025547721 1.090112979 1 12.80679784 -6.69187577 0.33582225 0.99237387 1.32434423 0.749318319 0.048122273 0.982015808 0.222252505 0.056653627 0.12053981 2.03E-07 6.69187577 0.33197036 RAS(ph)WASENGETDAEGTQMTPAK ddPTM_A459_MK2206_30min_R2 3 RASWASENGETDAEGTQMTPAK 22 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 RAS(0.975)WAS(0.022)ENGET(0.003)DAEGTQMTPAK;RAS(0.76)WAS(0.234)ENGET(0.003)DAEGT(0.003)QMTPAK;RAS(0.7)WAS(0.219)ENGET(0.081)DAEGTQMTPAK 107.31 3.02E-05 78371000 296283 335209 304080 318639 318971 278705 302610 233299 226210 239204 TRUE FALSE 318966.6543 318563.0085 314217.8754 292605.1744 306446.5958 289311.3141 262876.9435 263791.9803 245885.3369 231398.7931 1.37842834 1.376683967 1.357906285 1.264506053 1.32432236 1.250271491 1.136034203 1.139988575 1.062604232 1 17.82002181 -7.352130069 0.514281668 0.994566356 1.38907943 0.954893584 0.027548411 0.176166064 0.100444271 0.027251657 0.022522712 4.44E-08 7.352130069 0.394513074 RAS(ph)YDYNQDR ddPTM_A459_MK2206_30min_R2 1 RASYDYNQDR 10 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 RAS(0.999)Y(0.001)DYNQDR 81.278 0.023357 6230400 6597.6 8905.6 11690 11293 10316 10095 12415 8280.1 9444.5 7135.9 TRUE FALSE 7102.717329 8463.360854 12079.73877 10370.32578 9910.942006 10479.1723 10784.89559 9362.3375 10265.96554 6903.056167 1.028923589 1.226031 1.749911702 1.50228037 1.435732488 1.518048245 1.562336352 1.356259789 1.487162394 1 12.75301951 -10.5527426 4.983755216 0.999993569 1.439725227 0.323835499 0.185729021 136921678.5 0.14516633 10104.21881 0.046892407 2.80E-11 10.5527426 0.439731658 RASEDTTSGS(ph)PPK ddPTM_A459_MK2206_30min_R1 2 RASEDTTSGSPPK 13 1 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 RASEDTTS(0.004)GS(0.995)PPK;RASEDTT(0.001)S(0.112)GS(0.887)PPK 86.777 0.013356 6148600 3177.3 3240.7 4039.3 3689.9 3074.9 2557.1 3355.8 2888.5 2421.4 2896.9 TRUE FALSE 2907.05395 3029.729841 3765.12357 3974.096737 2952.420222 2701.880792 3131.940705 2863.246149 2673.113195 3255.789842 0.892887468 0.930566771 1.156439375 1.220624466 0.906821498 0.829869532 0.96196034 0.879432116 0.821033704 1 11.66879186 -6.483339172 24.94471097 0.891942768 1.051000444 0.339776524 0.102474477 621.7611043 392256.5126 0.034122004 0.038684425 3.29E-07 6.483339172 0.159057676 RASEDTTSGS(ph)PPKK ddPTM_A459_MK2206_30min_R1 3 RASEDTTSGSPPKK 14 2 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 RASEDTT(0.003)S(0.042)GS(0.955)PPKK;RASEDT(0.001)T(0.009)S(0.028)GS(0.962)PPKK;RASEDT(0.001)T(0.004)S(0.043)GS(0.952)PPKK 73.593 0.018993 101463000 26054 30675.5 28776 27794.3 16342.7 17018.1 21639.6 25810.9 5895.9 22331.1 TRUE FALSE 23837.97048 28678.51937 26822.76529 29935.0218 15691.73565 17981.65012 20196.06177 25585.23802 6508.799904 25097.64526 0.949809045 1.142677693 1.06873633 1.192742247 0.625227406 0.716467618 0.804699467 1.019427829 0.259339067 1 14.61526439 -6.2600708 24.99929008 0.740803951 1.090950718 0.408398584 0.206907422 123.9796727 2264686.797 0.059765928 0.072939319 5.49E-07 6.2600708 0.350146768 RASEDTTSGS(ph)PPKK ddPTM_A459_MK2206_30min_R2 1 RASEDTTSGSPPKK 14 2 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 RASEDT(0.001)T(0.01)S(0.086)GS(0.903)PPKK 52.42 0.046733 101540000 86757 83734 77431 81321 73010 51599 89363 73587 64401 97118 TRUE FALSE 93399.18262 79575.89132 80012.51089 74676.81417 70143.26055 53562.6361 77629.53076 83205.07356 70002.48257 93949.04761 0.9941472 0.847011155 0.851658563 0.794865047 0.746609597 0.570124312 0.826293962 0.885640415 0.745111146 1 16.51959092 -1.794693366 11.97583124 0.814071858 0.992094915 0 0.119979849 0 0 0.028025383 0 0.016043778 1.794693366 0.178023057 RASGLS(ph)TEGATGPSADTSGSELDGR ddPTM_A459_MK2206_30min_R1 1 RASGLSTEGATGPSADTSGSELDGR 25 1 Q7Z628 Q7Z628 NET1 Neuroepithelial cell-transforming gene 1 protein 1 RAS(0.363)GLS(0.559)T(0.078)EGATGPSADTSGSELDGR 76.351 0.00014656 5870800 139.95 305.9 269.63 276.85 346.73 233.88 203.33 209.76 203.64 190.34 TRUE FALSE 128.0465176 285.9858544 251.3282668 298.173035 332.9190099 247.1220835 189.7662267 207.9260904 224.8091067 213.9207562 0.598569862 1.33687754 1.174866204 1.393848078 1.556272593 1.155203861 0.887086555 0.971977166 1.050898991 1 7.74093266 -7.012777393 24.36077344 0.981725356 1.239918527 0.176174074 0.237256328 731.3065899 1394273.44 0.089519916 0.072906497 9.71E-08 7.012777393 0.258193171 RASGQAFELILS(ph)PR ddPTM_A459_MK2206_30min_R1 2 RASGQAFELILSPR 14 1 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 RASGQAFELILS(1)PR;RASGQAFELILS(1)PR 127.53 0.00062041 49988000 7889.4 7331.4 7221.3 6677.5 6541.8 5789.8 6455.5 5531.1 4361.9 3943.1 TRUE FALSE 7218.365101 6854.124527 6731.138276 7191.802207 6281.226254 6117.613473 6024.865374 5482.742176 4815.335114 4431.600997 1.628839127 1.546647483 1.518895379 1.622845155 1.417371794 1.380452229 1.359523427 1.237192198 1.086590403 1 12.11361228 -7.629132827 0.547330997 0.983417133 1.598931572 0.94704921 0.047195473 0.174754804 0.112819903 0.046894741 0.030975565 2.35E-08 7.629132827 0.615514439 RASGQAFELILS(ph)PR ddPTM_A459_MK2206_30min_R2 4 RASGQAFELILSPR 14 1 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR 172.95 5.81E-05 29908100 46514.7 78901 50491.6 55430.1 63217 57154 53415 38855.1 43983.7 44038.2 TRUE FALSE 50075.9012 74982.89107 52174.96474 50901.28352 60734.78294 59329.03552 46401.54634 43933.59498 47809.32272 42601.23714 1.175456502 1.760110647 1.224728863 1.194831111 1.425657728 1.39265992 1.089206545 1.031275097 1.12225198 1 15.37860771 -7.291510445 5.844956917 1.060656282 1.36964544 0.461791168 0.159464191 0.177836569 19.42648404 0.066690517 0.045712748 5.11E-08 7.291510445 0.308989158 RASLS(ph)DLTDLEDIEGLTVR ddPTM_A459_MK2206_30min_R2 1 RASLSDLTDLEDIEGLTVR 19 1 J3KSI3;J3KSU7;K7EN88;Q8WZ73-3;Q8WZ73-2;Q8WZ73 J3KSI3 RFFL;hCG_2039718 E3 ubiquitin-protein ligase rififylin 1 RAS(0.05)LS(0.722)DLT(0.228)DLEDIEGLTVR 93.228 0.0037289 5294500 20493 19830 19144 19137 15933 19140 23888 10066 20590 18787 TRUE FALSE 22061.95984 18845.27104 19782.25141 17573.44588 15307.39036 19868.38611 20751.47691 11381.66076 22380.88098 18173.98173 1.213931001 1.036936832 1.088492973 0.966956287 0.842269492 1.093232425 1.141823361 0.626261264 1.231479228 1 14.14958691 -2.909109544 0.818887251 0.979301978 6.031219754 0.140805975 0.159790921 84.65079008 3.28470505 0.054212426 715.076281 0.001232794 2.909109544 5.051917776 RASLT(ph)LEEK ddPTM_A459_MK2206_30min_R1 1 RASLTLEEK 9 1 A0A0U1RQQ9;Q6P3W7 A0A0U1RQQ9 SCYL2 SCY1-like protein 2 1 RAS(0.466)LT(0.534)LEEK 86.262 0.042532 8311700 4736.7 5710.3 6173.9 6462 6833.2 5715.8 6168.6 5544.1 4935.3 4652.1 TRUE FALSE 4333.818792 5338.558432 5754.832869 6959.70436 6561.019174 6039.423657 5757.103949 5495.628518 5448.342096 5228.43727 0.828893715 1.021061965 1.100679337 1.331125153 1.254871931 1.155110666 1.101113708 1.051103463 1.042059379 1 12.35216409 -4.870936524 2.114038729 1.142695606 0.77884429 0.483129926 0.095003542 0.50129265 2.987217761 0.028131117 0.329439493 1.35E-05 4.870936524 -0.363851315 RASPAPSDSSPGEPFVGGPVS(ph)SPR ddPTM_A459_MK2206_30min_R2 2 RASPAPSDSSPGEPFVGGPVSSPR 24 1 O60346 O60346 PHLPP1 PH domain leucine-rich repeat-containing protein phosphatase 1 1 RASPAPSDSSPGEPFVGGPVS(0.5)S(0.5)PR;RASPAPSDSSPGEPFVGGPVS(0.5)S(0.5)PR 148.05 4.95E-09 4841100 8999 20308.7 12921.8 16824.3 14895.3 17816.8 16650.7 13464.9 15190.8 17073.4 TRUE FALSE 9687.970359 19300.19949 13352.60636 15449.70087 14310.43568 18494.83081 14464.44309 15224.80866 16512.06833 16516.29636 0.586570388 1.168554927 0.808450398 0.935421631 0.866443382 1.119792865 0.875767955 0.921805248 0.999744009 1 14.01160259 -4.738771112 24.93774979 0.956738194 0.58656884 0.531683071 0.106558714 1461.237747 1607447.625 0.024999515 1.353561693 1.82E-05 4.738771112 -0.370169354 RASS(ph)ASVPAVGASAEGTR ddPTM_A459_MK2206_30min_R1 2 RASSASVPAVGASAEGTR 18 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 "Pantothenate kinase 2, mitochondrial" 1 RAS(0.238)S(0.762)ASVPAVGASAEGTR;RAS(0.001)S(0.999)ASVPAVGASAEGTR 190.8 4.19E-10 12672200 3416.9 3751.7 3349.9 3188.7 4850.9 4942.7 5073.1 4670.3 3923.7 2980.2 TRUE FALSE 3126.274712 3507.463648 3122.518121 3434.294227 4657.678381 5222.551403 4734.682755 4629.468059 4331.582656 3349.409675 0.933380809 1.047188606 0.932259241 1.025343138 1.390596801 1.559245332 1.413587233 1.382174326 1.293237638 1 11.70969113 -6.228168793 5.230813235 1.374253893 0.981157615 0.606332537 0.138810693 0.120239371 9.098558592 0.040459603 0.051333767 5.91E-07 6.228168793 -0.393096278 RASS(ph)ASVPAVGASAEGTR ddPTM_A459_MK2206_30min_R2 1 RASSASVPAVGASAEGTR 18 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 "Pantothenate kinase 2, mitochondrial" 1 RAS(0.251)S(0.681)AS(0.067)VPAVGASAEGTR 67.097 0.01548 10464000 24339 30222 18013 27363 36205 35985 34582 27202 37022 33071 TRUE FALSE 26202.41255 28721.21943 18613.54443 25127.35537 34783.40978 37354.43439 30041.34186 30757.3948 40242.10664 31991.89598 0.819032813 0.897765467 0.58182061 0.785428766 1.087256904 1.167621776 0.939029743 0.961412066 1.257884393 1 14.96541887 -6.245457607 7.989770736 1.06549623 0.766003903 0.614528157 0.115531045 0.136002313 53.3411087 0.03529031 0.044209992 5.68E-07 6.245457607 -0.299492327 RASS(ph)LNFLNK ddPTM_A459_MK2206_30min_R1 2 RASSLNFLNK 10 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 RAS(0.086)S(0.914)LNFLNK;RAS(0.431)S(0.569)LNFLNK 138.31 0.00084771 108548000 12368.5 12808.7 13475 11479.9 13971 12419.3 13586.1 13375.9 11116.7 9375.5 TRUE FALSE 11316.49413 11974.8513 12560.35454 12364.08389 13414.50549 13122.47003 12679.79606 13258.95592 12272.32075 10537.00772 1.073976068 1.136456537 1.192022904 1.173396111 1.273084906 1.245369689 1.203358334 1.258322692 1.164687459 1 13.36317761 -4.905139762 1.440499244 1.205536915 1.039071483 0.171919543 0.073336635 1.306400355 2.970035607 0.019997809 0.295403992 1.24E-05 4.905139762 -0.166465432 RASS(ph)LNFLNK ddPTM_A459_MK2206_30min_R2 2 RASSLNFLNK 10 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 RAS(0.012)S(0.988)LNFLNK;RAS(0.014)S(0.986)LNFLNK 117.27 0.010912 46786000 194380 255500 247057 261530 269320 263865 283740 215293 220330 226506 TRUE FALSE 209261.8823 242812.2415 255293.7571 240162.1624 258745.1436 273906.5675 246484.5972 243432.5343 239493.9051 219115.1278 0.955031651 1.108149145 1.165112421 1.096054685 1.180863897 1.250057768 1.124909082 1.110980044 1.093004885 1 17.74132957 -4.770363542 3.636412618 1.136754428 0.932410312 0.399899446 0.062202638 0.270640832 6.051931806 0.015623013 0.153814289 1.70E-05 4.770363542 -0.204344115 RASS(ph)LNVLNVGGK ddPTM_A459_MK2206_30min_R1 2 RASSLNVLNVGGK 13 1 Q07866-6;Q07866-4;Q07866-7;G3V5R9;Q07866-9;H0YG16;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 RAS(0.427)S(0.573)LNVLNVGGK;RAS(0.085)S(0.915)LNVLNVGGK 150.12 0.00026849 184590000 19561.8 17827.9 21581.2 20510.1 20736.6 17671.8 17821.4 19917.9 13776 9862.9 TRUE FALSE 17897.96619 16667.30047 20116.32827 22089.79146 19910.61731 18672.36204 16632.56692 19743.7599 15208.0645 11084.79051 1.614641807 1.503618896 1.814768466 1.992801887 1.796210518 1.684502925 1.500485454 1.781157693 1.371975815 1 13.43629389 -8.533945313 2.660765639 1.000313095 1.712817566 0.713580568 0.142595154 0.158196667 2.71831935 0.151001319 0.040730746 2.92E-09 8.533945313 0.712504472 RAT(ph)ISSPLELEGTVSR ddPTM_A459_MK2206_30min_R1 1 RATISSPLELEGTVSR 16 1 Q96GS4 Q96GS4 C17orf59 Uncharacterized protein C17orf59 1 RAT(0.941)IS(0.048)S(0.01)PLELEGTVSR 89.659 0.0162 3168900 532.4 406.19 390.22 552.34 669.95 667.46 622.67 615.08 718.63 551.9 TRUE FALSE 487.1165843 379.7469572 363.7329536 594.8813225 643.2644729 705.2510084 581.1328204 609.7024204 793.3341601 620.2735386 0.785325431 0.612224984 0.586407336 0.959062874 1.037065799 1.136999992 0.93689765 0.982957328 1.279006939 1 9.276760769 -5.880335388 4.272046147 1.054370447 0.657372314 0.753603381 0.102290763 0.104481547 3.37240586 0.0295187 0.04538372 1.32E-06 5.880335388 -0.396998133 RAT(ph)ISSPLELEGTVSR ddPTM_A459_MK2206_30min_R2 2 RATISSPLELEGTVSR 16 1 Q96GS4 Q96GS4 C17orf59 Uncharacterized protein C17orf59 1 RAT(0.865)IS(0.098)S(0.037)PLELEGTVSR;RAT(0.992)IS(0.007)S(0.001)PLELEGTVSR 79.471 0.030735 4106200 3400 6189.5 7968.4 7959 7207.1 9291.5 8171.7 7203 9571.9 7667.3 TRUE FALSE 3660.306614 5882.13843 8234.062479 7308.72424 6924.113041 9645.094543 7098.745974 8144.456832 10404.44656 7417.116629 0.493494547 0.793049203 1.11014332 0.985386183 0.933531639 1.300383293 0.957076224 1.098062393 1.402761623 1 12.85664274 -4.609319211 1.066277667 1.11167728 6.99E-16 0.645281107 0.143373417 1.520531141 1.115241821 0.045263861 2.092114769 2.46E-05 4.609319211 -1.11167728 RAT(ph)PEPGDEGEPGR ddPTM_A459_MK2206_30min_R2 1 RATPEPGDEGEPGR 14 1 M0QZR4;M0QYC1;M0QZH8;M0QYS3 M0QZR4 ARHGEF1 1 RAT(1)PEPGDEGEPGR 97.081 0.01416 73832000 105320 76180 109240 123030 100190 130960 104490 74645 106640 116800 TRUE FALSE 113383.3802 72397.01198 112882.0071 112978.0554 96256.03719 135943.7746 90770.33749 84401.35779 115915.3544 112988.8256 1.003491979 0.640744884 0.99905461 0.99990468 0.851907582 1.203161232 0.803356766 0.74698854 1.025901047 1 16.78582057 -5.360603858 21.44258373 0.946291244 0.821340741 0.112272606 0.146874549 26.42448675 5701.514032 0.037918447 0.078933664 4.36E-06 5.360603858 -0.124950502 RATIS(ph)SPLELEGTVSR ddPTM_A459_MK2206_30min_R1 1 RATISSPLELEGTVSR 16 1 Q96GS4 Q96GS4 C17orf59 Uncharacterized protein C17orf59 1 RAT(0.312)IS(0.677)S(0.012)PLELEGTVSR 176.85 6.11E-07 6350700 817.84 768.29 749.15 447.69 1016.9 975.25 986.53 1138.9 1103.8 842.94 TRUE FALSE 748.2784134 718.2741814 698.2997853 482.1711614 976.3947197 1030.467812 920.7203837 1128.942717 1218.54396 947.3697711 0.789848311 0.758177222 0.737093167 0.508957723 1.030637402 1.087714474 0.971870131 1.191660059 1.286239014 1 9.887783829 -6.410671791 5.69849491 1.10576579 0.707003381 0.760713725 0.109413815 0.118898581 5.209754802 0.035975409 0.040725887 3.88E-07 6.410671791 -0.398762409 RAVS(ph)PSNPK ddPTM_A459_MK2206_30min_R1 2 RAVSPSNPK 9 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 RAVS(0.997)PS(0.003)NPK;RAVS(0.993)PS(0.007)NPK 149.94 0.0024643 70200000 11879.5 14631.5 10520.9 11489.2 8710.5 10254.7 11372.7 12223.3 2230.79 7780.9 TRUE FALSE 10869.08614 13678.98669 9806.770621 12374.10017 8363.54234 10835.31225 10614.04793 12116.43298 2462.688603 8744.856635 1.242911873 1.564232241 1.121432978 1.415014641 0.956395592 1.23904973 1.213747506 1.385549642 0.281615664 1 13.09421902 -8.247471143 24.98547443 0.640807802 1.264162526 0.554587411 0.224563429 468.597404 838200.5185 0.143744022 0.053721982 5.66E-09 8.247471143 0.623354724 RAVS(ph)PSNPK ddPTM_A459_MK2206_30min_R2 4 RAVSPSNPK 9 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 RAVS(0.996)PS(0.004)NPK;RAVS(0.998)PS(0.002)NPK;RAVS(0.965)PS(0.035)NPK;RAVS(0.997)PS(0.003)NPK 119.74 0.012211 183725000 815453 1102140 928657 1035840 973970 971200 1052020 841063 1033990 930799 TRUE FALSE 877884.7087 1047409.33 959617.9609 951208.5585 935727.044 1008159.697 913888.5103 950992.8219 1123924.581 900427.1049 0.974964774 1.163236118 1.065736422 1.056397074 1.03920355 1.1196461 1.014950022 1.05615748 1.248212737 1 19.78024996 RAVSEGCAS(ph)EDEVEGEA ddPTM_A459_MK2206_30min_R2 1 RAVSEGCASEDEVEGEA 17 1 Q9BYX2-6;Q9BYX2-5;Q9BYX2-4;Q9BYX2-2;Q9BYX2 Q9BYX2-6 TBC1D2 TBC1 domain family member 2A 1 RAVS(0.031)EGCAS(0.969)EDEVEGEA 97.823 0.0097629 9826000 26207 29388 22549 35658 32470 32158 36777 26810 23117 23371 TRUE FALSE 28213.42807 27928.63465 23300.77241 32744.62734 31195.06465 33381.79522 31948.13572 30314.15905 25127.67487 22608.40618 1.247917604 1.235320811 1.030624283 1.448338599 1.379799372 1.476521386 1.413108711 1.340835741 1.111430619 1 14.46457167 -8.414166484 3.324771047 1.003991503 1.323400896 0.440304752 0.122706369 0.235543075 4.759893139 0.130159304 0.034698476 3.85E-09 8.414166484 0.319409393 RCAT(ph)PVIIDEILPSK ddPTM_A459_MK2206_30min_R2 2 RCATPVIIDEILPSK 15 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 RCAT(1)PVIIDEILPSK;RCAT(1)PVIIDEILPSK 136.96 0.00050366 2196100 25843 29338 27560 34508 30993 30866 36233 30463 27985 34556 TRUE FALSE 27821.55995 27881.11758 28478.83664 31688.58601 29776.05909 32040.62726 31475.56358 34444.6187 30419.08471 33428.44055 0.832272146 0.834053791 0.851934346 0.947952866 0.890740298 0.958484055 0.941580375 1.030398611 0.909976182 1 15.02878843 -5.666870187 0.499321812 0.983089656 0.77843145 0.689451125 0.036109895 1.105341414 0.393313202 0.025478356 0.121423556 2.15E-06 5.666870187 -0.204658207 RCAT(ph)PVIIDEILPSKK ddPTM_A459_MK2206_30min_R2 2 RCATPVIIDEILPSKK 16 2 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 RCAT(1)PVIIDEILPSKK;RCAT(1)PVIIDEILPSKK 102.5 0.0063419 8071500 30183 51979 49212 59783 57838 47377 53631 42527 50918 49013 TRUE FALSE 32493.83369 49397.79844 50852.70352 54898.53766 55566.98951 49179.96493 46589.18528 48085.42492 55346.7556 47413.70982 0.685325696 1.041846306 1.072531631 1.157862101 1.171960383 1.037251991 0.982609997 1.014167107 1.167315441 1 15.53301666 -4.758017265 4.185951516 1.076745038 0.64456853 0.754246628 0.066410094 0.122753874 4.243369809 0.017870341 0.164773935 1.75E-05 4.758017265 -0.432176508 RCDDLTR ddPTM_A459_MK2206_30min_R2 2 RCDDLTR 7 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 ; 122.74 0.01302 0 5704.9 3606.7 3213.61 4723 6403.1 5570.1 5965 6482.5 6780.1 4096.8 FALSE TRUE 6141.67153 3427.596523 3320.750153 4337.115792 6151.682121 5782.074059 5181.788335 7329.785008 7369.820842 3963.121752 1.549705489 0.86487288 0.837912727 1.094368547 1.552231424 1.458969575 1.307501677 1.849497812 1.859599907 1 11.95242157 -6.238161761 5.631547175 1.535891804 1.049537082 0.317428927 0.296448326 0.200084367 21.28110572 0.090034003 0.113187253 5.78E-07 6.238161761 -0.486354722 RCDELTR ddPTM_A459_MK2206_30min_R1 3 RCDELTR 7 1 P17844-2;P17844;J3KTA4;J3QSF1 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ;; 136.27 0.0038097 6261360 2700.34 2421.34 1842.09 2159.88 1603.49 1923.96 2692.59 2593.28 127.47 1493.28 FALSE TRUE 2470.661903 2263.710326 1717.054063 2326.234332 1539.619598 2032.892953 2512.972234 2570.607226 140.7209627 1678.2788 1.472140328 1.348828529 1.023104185 1.386083368 0.917380115 1.211296331 1.497350878 1.531692604 0.083848382 1 10.71276668 -8.251276853 24.99625669 0.541924157 1.28492242 0.538337293 0.280020281 453.5443079 1115567.074 0.187686056 0.069140825 5.61E-09 8.251276853 0.742998264 RCDELTR ddPTM_A459_MK2206_30min_R2 2 RCDELTR 7 1 P17844-2;P17844;J3KTA4;J3QSF1 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ; 124.08 0.0091764 17528900 13701.5 16369 15655.1 13520.7 19467.3 18618.9 15306 14384.1 20126.5 19709.7 FALSE TRUE 14750.49737 15556.13926 16177.03322 12416.01556 18702.91599 19327.45529 13296.30381 16264.15126 21877.06659 19066.5741 0.77363124 0.815885391 0.848449917 0.651192789 0.980926929 1.013682646 0.697361977 0.853019067 1.147404168 1 14.21875802 -8.203605476 7.05901381 1.072848657 0.829662819 0.441525884 0.110031532 0.214850088 22.51505343 0.077798595 0.028702078 6.26E-09 8.203605476 -0.243185838 RCLIDDR ddPTM_A459_MK2206_30min_R1 1 RCLIDDR 7 1 O95373 O95373 IPO7 Importin-7 0 92.47 0.036504 1206800 1189.8 1001.5 982.67 1034.2 976.6 1281.6 1231.4 1125.7 682 788.48 FALSE TRUE 1088.601262 936.302168 915.9690983 1113.854263 937.699954 1354.163084 1149.255553 1115.858124 752.8963406 886.1628551 1.228443797 1.056580247 1.033635176 1.256940817 1.058157593 1.52811989 1.296889783 1.259202095 0.849613969 1 9.791428045 -8.257945155 24.93892168 0.924806971 1.212807728 0.398978818 0.142327333 294.2228618 2099962.853 0.111842043 0.038470473 5.52E-09 8.257945155 0.288000757 RCMRSRTSMR ddPTM_A459_MK2206_30min_R2 1 RCMRSRTSMR 10 3 B0QY90 B0QY90 EIF3L Eukaryotic translation initiation factor 3 subunit L 0 57.859 0.038168 0 7330.5 14979 9128.9 21691 16646 35176 11339 6242.2 22438 7286.1 FALSE TRUE 7891.728716 14235.16464 9433.25297 19918.77591 15992.3944 36514.64733 9850.175679 7058.076973 24389.61668 7048.355154 1.119655373 2.019643496 1.338362322 2.826017628 2.268954111 5.180591292 1.397514096 1.001379303 3.460327431 1 12.78307091 -5.757511993 24.98407359 2.510532955 1.545262564 0.115248755 1.201510094 228.2221414 1451809.372 0.335074104 0.553742416 1.75E-06 5.757511993 -0.96527039 RCPT(ph)PEIQK ddPTM_A459_MK2206_30min_R1 1 RCPTPEIQK 9 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RCPT(1)PEIQK 97.957 0.025121 47586000 7660.5 8023.3 7312.9 6275.1 7023.7 7244.9 9817.2 7414.5 8160.4 9164.6 TRUE FALSE 7008.934248 7500.981712 6816.520723 6758.409289 6743.931156 7655.099977 9162.3125 7349.675808 9008.702782 10299.97984 0.680480385 0.728252077 0.661799424 0.656157526 0.654751879 0.743215045 0.889546644 0.713562155 0.87463305 1 13.33035389 -8.328411843 0.465192521 1.006624437 0.667408228 0.753646105 0.056328805 0.52709221 0.300769783 0.070277474 0.039041117 4.69E-09 8.328411843 -0.339216209 RCPT(ph)PEIQK ddPTM_A459_MK2206_30min_R2 3 RCPTPEIQK 9 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RCPT(1)PEIQK;RCPT(1)PEIQK;RCPT(1)PEIQK 103.44 0.019018 188614000 593950 576900 572260 614790 544280 555310 710470 562580 502150 631310 TRUE FALSE 639423.2687 548251.9849 591338.8628 564559.6904 522908.8324 576442.7112 617184.4356 636111.1376 545826.0993 610710.4064 1.047015512 0.897728251 0.968280312 0.924431096 0.856230428 0.943888798 1.010600817 1.041592105 0.893756015 1 19.2201289 -7.153697588 6.186032896 0.989683635 0.933929928 0.131078576 0.058205663 0.437764341 21.56525536 0.022161269 0.01711196 7.02E-08 7.153697588 -0.055753707 RCS(ph)DNTEVEVSNLENK ddPTM_A459_MK2206_30min_R2 2 RCSDNTEVEVSNLENK 16 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 RCS(0.974)DNT(0.026)EVEVSNLENK;RCS(1)DNTEVEVSNLENK 205.52 5.95E-08 12032800 114604 106120 101548 117587 91272 88454 110755 96506 86831 107050 TRUE FALSE 123378.1704 100850.2351 104933.5596 107979.766 87688.20268 91820.17895 96212.73546 109119.6656 94383.40343 103556.9673 1.191403858 0.973862385 1.013293093 1.042708847 0.846762946 0.88666346 0.929080273 1.053716311 0.911415291 1 16.6600651 -1.592026597 1.001381528 0.950530689 199.9999996 0.526538397 0.064959606 1254.724203 2.023302656 0.021617856 572619.1336 0.025584292 1.592026597 199.049469 RCS(ph)DPSLNEK ddPTM_A459_MK2206_30min_R2 2 RCSDPSLNEK 10 1 Q13615-3;Q13615-2;Q13615;G5E953 Q13615-3 MTMR3 Myotubularin-related protein 3 1 RCS(1)DPSLNEK;RCS(1)DPSLNEK 84.173 0.019675 20604500 84905 94028 92763 96688 99647 94927 107451 82067 83537 86719 TRUE FALSE 91405.39208 89358.70625 95855.67212 88788.28111 95734.35809 98539.5135 93342.55463 92793.43868 90802.89726 83889.36613 1.089594502 1.065197061 1.142643896 1.05839733 1.141197776 1.174636525 1.112686374 1.106140658 1.082412485 1 16.35620032 -8.740319459 1.807723118 1.000112953 1.112555543 0.4993058 0.033617388 0.713814492 4.12943518 0.033793015 0.009506817 1.82E-09 8.740319459 0.11244259 RDAS(ph)EETSTSVMQK ddPTM_A459_MK2206_30min_R1 2 RDASEETSTSVMQK 14 1 Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70;M0QYR7;M0R2N0;M0QZC7 Q9H0W8-2 SMG9 Protein SMG9 1 RDAS(0.997)EET(0.001)S(0.001)T(0.002)SVMQK;RDAS(0.999)EETSTSVMQK 147.12 0.0008704 3694200 1915.65 1804.05 2303.5 1523.15 2384 2398.1 2381.2 1927.2 1842.11 1569.54 TRUE FALSE 1752.713908 1686.606017 2147.144838 1640.463277 2289.040232 2533.87835 2222.354493 1910.350694 2033.603927 1763.986465 0.993609613 0.956133197 1.217211629 0.92997498 1.297651812 1.436449996 1.259847815 1.082973556 1.152845539 1 10.78462378 -6.266769582 24.99072575 1.223428876 1.033152362 0.298273364 0.133739498 567.1924052 2659285.147 0.042879598 0.050030527 5.41E-07 6.266769582 -0.190276514 RDAYVSR ddPTM_A459_MK2206_30min_R2 2 RDAYVSR 7 1 P00390-5;P00390-4;P00390-2;P00390-3;P00390;A0A2R8YF59;H0YC68 P00390-5 GSR "Glutathione reductase, mitochondrial" 0 ; 102.51 0.026018 1525560 10599.6 8693.6 11794.3 9271.1 9323 9067.6 9140.5 12428.1 13952.5 10860.1 FALSE TRUE 11411.11353 8261.888466 12187.51608 8513.621473 8956.932176 9412.673872 7940.34137 14052.49534 15166.06323 10505.73583 1.08617937 0.786416925 1.1600821 0.810378408 0.852575424 0.895955698 0.755810112 1.337602199 1.443598381 1 13.35888959 -7.771121715 24.99987385 1.29295036 0.905677023 0.502843891 0.160153325 150.1856653 387774.261 0.081971705 0.040161311 1.69E-08 7.771121715 -0.387273337 RDDFFYEDR ddPTM_A459_MK2206_30min_R2 2 RDDFFYEDR 9 1 G3V1T9;J3KPD3;Q9Y580 G3V1T9 RBM7 RNA-binding protein 7 0 ; 171.85 0.00072396 4307000 16620.3 22280.5 16024.9 22456 20508.6 19376.5 18148 14432.1 14347.5 15148.3 FALSE TRUE 17892.76295 21174.08277 16559.16217 20621.27297 19703.32932 20113.88629 15765.1458 16318.42502 15595.41962 14654.01221 1.221014606 1.444934156 1.13000876 1.40721003 1.344568916 1.37258561 1.07582453 1.11358069 1.064242297 1 13.8390081 -7.269248184 24.1845065 1.072876903 1.322167642 0.664670865 0.08919399 234.6871408 726841.0446 0.035114579 0.024190347 5.38E-08 7.269248184 0.249290738 RDDGLSAAAR ddPTM_A459_MK2206_30min_R2 1 RDDGLSAAAR 10 1 F8WBN3;B9A031;C9JQZ0;B8ZZY7;F8WBV6;P84101-4;P84101;P84101-3;P84101-2 F8WBN3 SERF2 Small EDRK-rich factor 2 0 141.89 0.0030306 0 21052 23751 25803 20437 23548 21566 25252 24592 18622 21544 FALSE TRUE 22663.75731 22571.55988 26663.25914 18767.23173 22623.3872 22386.70924 21936.38207 27806.25884 20241.7079 20841.02104 1.087459067 1.083035223 1.27936434 0.900494831 1.085522017 1.074165666 1.052557935 1.334208088 0.97124358 1 14.34713834 RDDGTGQLLLPLSDAR ddPTM_A459_MK2206_30min_R1 1 RDDGTGQLLLPLSDAR 16 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 160.8 6.96E-05 5282100 1747.9 2047.7 2469 1882.5 2947.9 2038.2 2497.8 2567.5 2099.5 1480.6 FALSE TRUE 1599.231926 1914.394358 2301.411159 2027.490476 2830.478901 2153.601123 2331.176319 2545.052618 2317.750538 1664.027906 0.961060761 1.150458085 1.383036397 1.218423362 1.700980429 1.294209739 1.400923813 1.529453087 1.39285557 1 10.70046391 -4.886057127 1.335422935 1.399601543 0.817777863 0.343931052 0.176153439 1.088952543 1.987893482 0.049318183 0.82253769 1.30E-05 4.886057127 -0.581823679 RDDGTGQLLLPLSDAR ddPTM_A459_MK2206_30min_R2 2 RDDGTGQLLLPLSDAR 16 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 179.14 1.46E-06 5983300 29448 31349 33070 37504 31589 38199 32424 25687 34854 27700 FALSE TRUE 31702.56152 29792.25425 34172.53729 34439.80323 30348.65714 39652.68971 28166.68985 29044.3791 37885.53792 26796.15127 1.183101305 1.111810944 1.275277817 1.285251859 1.132575228 1.479790486 1.051146845 1.083901147 1.413842516 1 14.70973818 -10.70228156 4.928760357 0.999984006 1.219701434 0.199931934 0.134218455 2.84E-05 4.73E-06 0.126337612 0.030638608 1.98E-11 10.70228156 0.219717429 RDEDMLYS(ph)PELAQR ddPTM_A459_MK2206_30min_R1 2 RDEDMLYSPELAQR 14 1 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 RDEDMLYS(1)PELAQR;RDEDMLYS(1)PELAQR 141.3 0.00028515 16960800 3602.6 3444.6 3503.2 2796.8 3814.7 3361.5 4416.8 3131 4061.5 5224.7 TRUE FALSE 3296.179952 3220.355914 3265.412544 3012.210021 3662.752421 3551.825225 4122.163331 3103.625997 4483.707459 5871.97528 0.561340911 0.548428043 0.556101208 0.512980705 0.623768365 0.604877414 0.702006247 0.528548887 0.763577373 1 12.51963018 -10.39696283 0.273532796 1.233419855 0.527191738 0.841872654 0.056289908 4.774114577 0.338544335 0.946016855 0.075115539 4.01E-11 10.39696283 -0.706228117 RDEDMLYS(ph)PELAQR ddPTM_A459_MK2206_30min_R2 2 RDEDMLYSPELAQR 14 1 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 RDEDMLY(0.003)S(0.997)PELAQR;RDEDMLY(0.002)S(0.998)PELAQR 70.615 0.02932 35160000 38837 39625 37957 48426 33576 42974 49777 32507 31710 40243 TRUE FALSE 41810.39058 37657.28012 39222.46744 44469.44089 32257.63753 44609.40568 43241.22011 36755.77651 34468.07848 38929.87421 1.07399244 0.967310604 1.007515905 1.142296034 0.82860883 1.145891339 1.110746464 0.944153488 0.8853889 1 15.24859006 -7.892274685 8.959354953 0.933551561 1.035312582 0.182824244 0.092588282 0.43816108 33.10402422 0.049843152 0.023887943 1.28E-08 7.892274685 0.101761021 RDHALLEEQSK ddPTM_A459_MK2206_30min_R2 2 RDHALLEEQSK 11 1 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 131.32 0.0030103 23820000 112999 133930 128340 141911 140585 112275 139674 123407 110328 135649 FALSE TRUE 121650.2903 127279.231 132618.7915 130316.4173 135064.9265 116547.7038 121334.636 139536.7186 119924.13 131222.7842 0.927051587 0.969947648 1.010638452 0.993092915 1.029279536 0.888166674 0.924646103 1.0633574 0.913897161 1 17.00165871 RDHFEEAMR ddPTM_A459_MK2206_30min_R1 3 RDHFEEAMR 9 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ;; 117.71 0.010076 17105800 5910.9 5584.8 5780.6 5139.6 6394.6 5284.2 5806.1 5128.3 4377.2 3996.7 FALSE TRUE 5408.146916 5221.228505 5388.228978 5535.452883 6139.889541 5583.386837 5418.785663 5083.463814 4832.225604 4491.84137 1.2039933 1.162380431 1.199559053 1.232334899 1.366898124 1.243006237 1.206361761 1.131710449 1.075778329 1 12.13309126 -8.130879851 1.422506856 1.009508651 1.23519391 0.708597122 0.050968831 0.251419041 0.928032017 0.05329999 0.017067087 7.40E-09 8.130879851 0.225685258 RDHRPPCAQEAPR ddPTM_A459_MK2206_30min_R1 1 RDHRPPCAQEAPR 13 2 Q13501;Q13501-2;E7EMC7;E9PFW8;C9JRJ8;E3W990 Q13501 SQSTM1 Sequestosome-1 0 103.44 0.0053829 1459400 650.26 612.99 556.11 429.36 555.05 620.7 769.54 492.34 393.43 496.06 FALSE TRUE 594.9519723 573.0842396 518.3628026 462.4293816 532.9411832 655.8434976 718.2053907 488.0355233 434.3284564 557.5156579 1.067148454 1.027924923 0.929772636 0.829446447 0.955921463 1.176367853 1.28822461 0.875375456 0.779042616 1 9.122868514 -7.945121718 24.99996915 0.868740607 1.032409134 0.223627192 0.130478284 135.3602819 61663.34567 0.078901995 0.037903282 1.13E-08 7.945121718 0.163668526 RDHRPPCAQEAPR ddPTM_A459_MK2206_30min_R2 2 RDHRPPCAQEAPR 13 2 Q13501;Q13501-2;E7EMC7;E9PFW8;C9JRJ8;E3W990 Q13501 SQSTM1 Sequestosome-1 0 ; 77.279 0.027548 5484700 0 0 0 555.98 931.13 505.24 988.21 629.63 0 711.68 FALSE TRUE 0 0 0 510.5546555 894.5691576 524.4672622 858.4568399 711.9248028 0 688.4579399 0 0 0 0.741591644 1.299380987 0.761800005 1.246927067 1.034086124 0 1 9.427224708 -5.811594406 4.390434843 0.911546347 9.75E-14 0.582552463 0.338301062 0.1412655 5.683223145 0.0962524 0.152200649 1.54E-06 5.811594406 -0.911546347 RDHVFEDSYR ddPTM_A459_MK2206_30min_R1 1 RDHVFEDSYR 10 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 0 134.57 0.0014035 4245200 580.23 781.44 779.59 596.24 927.86 738.69 559.65 596.5 633.14 582.42 FALSE TRUE 530.8783916 730.568114 726.6736029 642.1625081 890.9013714 780.5139894 522.3167696 591.2848634 698.9571687 654.5745866 0.811028113 1.116096055 1.110146372 0.981037946 1.361038741 1.192398858 0.797948439 0.903311671 1.067803705 1 9.354413782 -7.251375851 24.92498361 0.934208589 1.10379806 0.203914717 0.147206092 1044.064064 2585904.977 0.058608106 0.044862375 5.61E-08 7.251375851 0.169589471 RDHVFEDSYR ddPTM_A459_MK2206_30min_R2 2 RDHVFEDSYR 10 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 0 ; 105.4 0.0084592 6037400 7779.3 9596.6 7217.6 12274.4 10677.1 17245.6 12419.5 8082.2 10110.9 9980.2 FALSE TRUE 8374.889189 9120.046799 7458.231182 11271.54226 10257.86341 17901.89339 10788.80473 9138.57129 10990.32781 9654.546891 0.867455437 0.944637475 0.772509706 1.167485371 1.062490402 1.854244802 1.117484316 0.946556207 1.138357701 1 13.23699284 -5.830950811 6.32949987 1.204148172 0.870656291 0.271356726 0.240525291 0.280387233 19.58092008 0.071808056 0.108206225 1.48E-06 5.830950811 -0.33349188 RDLFAFQES(ph)PPR ddPTM_A459_MK2206_30min_R2 2 RDLFAFQESPPR 12 1 E7EX48;P51957-3;P51957-2;P51957 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 RDLFAFQES(1)PPR;RDLFAFQES(1)PPR 97.073 0.0084894 3496900 12745 13674.3 16027.5 17561.6 15977.9 16782.9 16307.9 13112.5 14416 12836.9 TRUE FALSE 13720.767 12995.25415 16561.84885 16126.7611 15350.52736 17421.58502 14166.65314 14826.34877 15669.87762 12418.033 1.10490663 1.046482494 1.333693415 1.298656647 1.236148056 1.402926294 1.140812972 1.193936976 1.26186471 1 13.60014905 -11.01675279 2.862585265 0.991959549 1.226792396 0.301666346 0.102358579 23718995.57 25626833.5 1502067.313 0.026556166 9.62E-12 11.01675279 0.234832847 RDLNES(ph)PVK ddPTM_A459_MK2206_30min_R1 2 RDLNESPVK 9 1 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 RDLNES(1)PVK;RDLNES(1)PVK 83.226 0.020198 30477000 12200.7 13014.1 12877.5 10432.5 10270.1 10227.6 11720.1 11535 11326 11037.8 TRUE FALSE 11162.9664 12166.87972 12003.41118 11236.01296 9861.02017 10806.67787 10938.27351 11434.15071 12503.37823 12405.246 0.899858528 0.980785043 0.96760767 0.905746888 0.794907265 0.871137733 0.881745797 0.921718982 1.007910543 1 13.59866272 -8.192767729 3.855963206 1.005455383 0.90107601 0.414804479 0.048443123 0.257418283 7.185311471 0.044601173 0.014482723 6.42E-09 8.192767729 -0.104379373 RDLNES(ph)PVK ddPTM_A459_MK2206_30min_R2 2 RDLNESPVK 9 1 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 RDLNES(1)PVK;RDLNES(1)PVK 83.137 0.020313 33868000 168042 192258 194462 187081 202568 166610 219626 174770 165179 190526 TRUE FALSE 180907.4247 182710.7473 200945.266 171795.8839 194614.1625 172950.4603 190788.8424 197613.0391 179545.9708 184309.1522 0.981543361 0.991327588 1.090262006 0.932107179 1.055911549 0.938371525 1.035156638 1.072182454 0.974156566 1 17.49176819 RDLPVTSEDMGRTTS(ph)CST(ph)NHTPS(ph)SDASEWSR ddPTM_A459_MK2206_30min_R1 1 RDLPVTSEDMGRTTSCSTNHTPSSDASEWSR 31 2 P0C7T5 P0C7T5 ATXN1L Ataxin-1-like 3 RDLPVT(0.002)S(0.009)EDMGRT(0.308)T(0.308)S(0.344)CS(0.145)T(0.746)NHT(0.142)PS(0.249)S(0.249)DAS(0.249)EWS(0.249)R 45.862 0.023694 12400000 434.96 379.64 423.38 248.61 751.75 621.48 586.28 656.31 341.81 376.23 TRUE FALSE 397.9643679 354.925367 394.6421452 267.7579853 721.8062056 656.6676605 547.1703309 650.5719509 377.3423727 422.8402128 0.941169633 0.839384137 0.933312711 0.633236805 1.70704248 1.552992456 1.2940357 1.538576349 0.892399448 1 8.723968776 -6.252663864 24.99591623 1.367037195 0.843857619 0.487755493 0.246330732 526.0601623 1498413.126 0.071803209 0.091272233 5.59E-07 6.252663864 -0.523179576 RDNYVPEVSALDQEIIEVDPDTK ddPTM_A459_MK2206_30min_R1 1 RDNYVPEVSALDQEIIEVDPDTK 23 1 H3BNC9;P08708;H0YN88;A0A075B716 H3BNC9 RPS17 40S ribosomal protein S17 0 125.37 3.48E-05 0 639.07 934.65 789.87 621.02 980.6 670.81 782.72 835.13 943.54 825.21 FALSE TRUE 584.7137406 873.8041151 736.2558251 668.851068 941.5406255 708.7906825 730.506177 827.8285465 1041.624359 927.4432448 0.630457706 0.942164515 0.793855397 0.721177357 1.015200262 0.764241571 0.787655936 0.892592136 1.123113857 1 9.857115188 -8.083080426 4.194330104 1.057626622 0.816335286 0.47310791 0.105432364 0.198831228 6.228586188 0.07359548 0.026244042 8.26E-09 8.083080426 -0.241291336 RDPHLACVAYER ddPTM_A459_MK2206_30min_R1 2 RDPHLACVAYER 12 1 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 ; 90.861 0.01608 10933900 5184.7 4818.1 5522.7 5348.6 5899 5614.9 5633.6 5373.8 4607.1 4225.2 FALSE TRUE 4743.714039 4504.440814 5147.834511 5760.550099 5664.030339 5932.810786 5257.792823 5326.817433 5086.024532 4748.649675 0.998960623 0.948572989 1.08406281 1.213092246 1.192766518 1.249367966 1.107218511 1.12175414 1.071046483 1 12.21330161 -5.441557158 4.160797805 1.147682583 0.976231005 0.454271213 0.06947472 0.1846902 5.833130838 0.018932719 0.040989609 3.62E-06 5.441557158 -0.171451578 RDPHLACVAYER ddPTM_A459_MK2206_30min_R2 1 RDPHLACVAYER 12 1 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 73.36 0.036748 9144300 26930 41270 26765 34163 40771 41955 36418 24683 35823 31865 FALSE TRUE 28991.78151 39220.59181 27657.33174 31371.77362 39170.12568 43551.62692 31636.27285 27909.15285 38938.81979 30825.24766 0.940520635 1.272352853 0.897229831 1.017729816 1.270715685 1.412855702 1.026310419 0.905399144 1.263211904 1 14.91182487 -1.554897 18.68210572 1.106154762 0.005505202 0 0.176148956 0 0 0.040962808 0 0.02786782 1.554897 -1.10064956 RDPSSNDINGGMEPTPST(ph)VSTPSPSADLLGLR ddPTM_A459_MK2206_30min_R1 1 RDPSSNDINGGMEPTPSTVSTPSPSADLLGLR 32 1 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 1 RDPSSNDINGGMEPT(0.001)PS(0.219)T(0.723)VS(0.011)T(0.031)PS(0.011)PS(0.004)ADLLGLR 184.95 2.29E-35 66376000 1150.3 1154.1 1198.3 758.03 1713.3 873.12 1116.9 1003.2 921.7 983.84 TRUE FALSE 1052.460945 1078.96788 1116.962735 816.4136019 1645.055633 922.5552999 1042.393639 994.4291282 1017.514013 1105.725527 0.951828387 0.975800824 1.010162746 0.738351048 1.487761287 0.834343856 0.942723681 0.899345366 0.920222956 1 10.1107776 -10.38560224 4.255341373 1.000000326 0.975591449 0.001691927 0.187155326 62892545.07 304.4164036 217.6560599 0.043770885 4.12E-11 10.38560224 -0.024408877 RDPSSNDINGGMEPTPSTVSTPS(ph)PSADLLGLR ddPTM_A459_MK2206_30min_R1 3 RDPSSNDINGGMEPTPSTVSTPSPSADLLGLR 32 1 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 1 RDPSSNDINGGMEPTPSTVS(0.014)T(0.038)PS(0.842)PS(0.106)ADLLGLR;RDPSSNDINGGMEPTPS(0.001)T(0.001)VS(0.005)T(0.005)PS(0.711)PS(0.277)ADLLGLR;RDPSSNDINGGMEPTPS(0.002)T(0.002)VS(0.006)T(0.082)PS(0.453)PS(0.453)ADLLGLR 184.68 1.38E-35 98218000 2254.64 2415.84 2104.77 1980.96 2487.2 2368.44 2162.92 2525.66 1767.95 2057.94 TRUE FALSE 2062.871028 2258.568377 1961.904077 2133.533882 2388.129557 2502.539026 2018.635553 2503.578421 1951.734729 2312.893144 0.891900706 0.976512202 0.848246743 0.922452422 1.032529135 1.08199509 0.872775104 1.082444482 0.843849935 1 11.1754829 -6.116312494 6.64493251 0.988635748 0.908374407 0.182030717 0.079062795 0.412080256 21.09333751 0.022350672 0.02903263 7.65E-07 6.116312494 -0.080261342 RDPSSNDINGGMEPTPSTVSTPS(ph)PSADLLGLR ddPTM_A459_MK2206_30min_R2 10 RDPSSNDINGGMEPTPSTVSTPSPSADLLGLR 32 1 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 1 RDPSSNDINGGMEPTPSTVSTPS(0.753)PS(0.247)ADLLGLR;RDPSSNDINGGMEPT(0.002)PS(0.009)T(0.009)VS(0.154)T(0.154)PS(0.557)PS(0.117)ADLLGLR;RDPSSNDINGGMEPTPS(0.001)T(0.002)VS(0.024)T(0.024)PS(0.699)PS(0.248)ADLLGLR;RDPSSNDINGGMEPTPS(0.001)T(0.002)VS(0.019)T(0.019)PS(0.648)PS(0.312)ADLLGLR;RDPSSNDINGGMEPTPSTVS(0.002)T(0.007)PS(0.812)PS(0.179)ADLLGLR;RDPSSNDINGGMEPTPS(0.007)T(0.007)VS(0.063)T(0.063)PS(0.632)PS(0.227)ADLLGLR;RDPSSNDINGGMEPTPSTVS(0.006)T(0.012)PS(0.491)PS(0.491)ADLLGLR;RDPSSNDINGGMEPTPSTVS(0.001)T(0.001)PS(0.499)PS(0.499)ADLLGLR;RDPSSNDINGGMEPTPSTVS(0.001)T(0.001)PS(0.718)PS(0.28)ADLLGLR;RDPSSNDINGGMEPTPSTVST(0.004)PS(0.922)PS(0.074)ADLLGLR 174.07 1.74E-29 125624600 146495.3 185706.7 158849 189678.1 202015.2 185567.1 186646.2 149051.7 171848.6 172244.4 TRUE FALSE 157711.0928 176484.7753 164144.9464 174180.7925 194083.0682 192628.986 162139.3297 168533.269 186795.6806 166624.0793 0.946508412 1.059179298 0.9851214 1.045351867 1.164796043 1.15606932 0.973084625 1.011458066 1.121060541 1 17.34623738 -3.45477128 0.873540514 1.06611354 1.16E-07 0.20132237 0.065833815 34.05571123 3.241890325 0.023966192 58.43762888 0.000350937 3.45477128 -1.066113424 RDPYGFGDSR ddPTM_A459_MK2206_30min_R1 1 RDPYGFGDSR 10 1 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 0 107.03 0.015616 2847700 2469 2023.1 2016.5 1930.5 2499.8 2528.8 2009.1 1880.6 1738.1 1569.9 FALSE TRUE 2258.998585 1891.395822 1879.625598 2079.187444 2400.227673 2671.978471 1875.076605 1864.158112 1918.781715 1764.391064 1.280327605 1.071982204 1.065311221 1.178416444 1.360371701 1.514391296 1.062732998 1.056544748 1.087503646 1 10.78495464 -7.468557175 24.99896718 1.055140677 1.23606701 0.360614471 0.125845081 417.4936576 192132.262 0.059489888 0.040107791 3.40E-08 7.468557175 0.180926333 RDQALTEEHAR ddPTM_A459_MK2206_30min_R1 6 RDQALTEEHAR 11 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;H0YJ11 P12814-4 ACTN1 Alpha-actinin-1 0 ;;;;; 131.12 0.001528 44442190 11159.65 11060.59 12048.76 10329.22 12076.65 10903.47 12399.36 12132.73 4653.63 8451.95 FALSE TRUE 10210.46317 10340.54358 11230.92374 11124.77831 11595.61146 11520.81505 11572.22132 12026.65482 5137.391492 9499.041375 1.074894062 1.088588119 1.182321805 1.171147474 1.220713859 1.212839759 1.218251491 1.266091424 0.540832626 1 13.21356621 -8.24873185 24.99857675 0.770416296 1.179946892 0.662160813 0.116839638 364.4665419 716991.5219 0.075410489 0.028086217 5.64E-09 8.24873185 0.409530596 RDQALTEEHAR ddPTM_A459_MK2206_30min_R2 3 RDQALTEEHAR 11 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;H0YJ11 P12814-4 ACTN1 Alpha-actinin-1 0 ;; 149.41 0.00085469 59705900 50302.6 65534.3 52919.4 66129.8 68091.3 65051 65696.4 50101.2 60713.7 50503.9 FALSE TRUE 54153.80573 62279.96196 54683.70638 60726.7838 65417.69343 67526.56139 57070.38376 56649.59886 65994.46788 48855.96188 1.108438022 1.274766877 1.119284204 1.242975913 1.338991004 1.382156011 1.168135506 1.159522742 1.350796614 1 15.576247 -10.90580772 3.048076157 0.996873216 1.23885391 0.370126512 0.093274101 19630169.85 24451314.75 541945.9661 0.024626056 1.24E-11 10.90580772 0.241980694 RDS(ph)APTENR ddPTM_A459_MK2206_30min_R2 1 RDSAPTENR 9 1 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 RDS(0.974)APT(0.026)ENR 70.54 0.037507 8168600 12615 9553 17398 14045 8023.6 8706.1 8033.2 11941 10166 14723 TRUE FALSE 13580.8141 9078.611911 17978.04064 12897.47857 7708.553149 9037.416736 6978.43119 13501.7297 11050.2203 14242.58972 0.953535443 0.637427048 1.262273294 0.905557123 0.54123255 0.634534654 0.489969263 0.947982773 0.775857518 1 13.79792387 -6.028655052 23.24139851 0.713091118 0.94708028 0.196710261 0.205473525 452.5146334 367023.0857 0.061163103 0.079177685 9.36E-07 6.028655052 0.233989162 RDS(ph)ASYR ddPTM_A459_MK2206_30min_R2 1 RDSASYR 7 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 RDS(0.93)AS(0.07)YR 63.184 0.044796 4575300 7973.2 1885.3 2321.2 1275.4 2231.2 4539.9 4466.3 35154 16716 5735.1 TRUE FALSE 8583.634322 1791.678743 2398.587649 1171.19574 2143.591877 4712.669076 3879.869445 39748.7485 18169.92746 5547.964157 1.547168309 0.32294346 0.432336544 0.211103696 0.3863745 0.849441154 0.699332104 7.164564763 3.275062158 1 12.43774275 -7.658355311 11.51440207 4.162118803 0.590581771 0.497222369 1.451470121 0.274452809 28.52106654 0.635071922 0.366371837 2.20E-08 7.658355311 -3.571537032 RDS(ph)DGVDGFEAEGK ddPTM_A459_MK2206_30min_R1 1 RDSDGVDGFEAEGK 14 1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RDS(1)DGVDGFEAEGK 169.58 8.99E-05 8846600 2922 3472.7 3003.5 2797.1 2734.2 2990 3377.5 2797.1 2961.4 3391.7 TRUE FALSE 2673.468556 3246.626599 2799.630788 3012.533127 2625.291024 3159.291216 3152.193138 2772.64525 3269.248127 3811.889402 0.70134998 0.851710597 0.734447014 0.790299195 0.688711226 0.828799286 0.826937197 0.727367706 0.857645063 1 11.89629055 -8.576357938 4.066321144 0.999901429 0.772762353 0.641978686 0.053293515 0.157882287 7.820375158 0.048818113 0.012781493 2.65E-09 8.576357938 -0.227139075 RDS(ph)DGVDGFEAEGK ddPTM_A459_MK2206_30min_R2 5 RDSDGVDGFEAEGK 14 1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK 165.49 0.0001285 65131700 191657 182934 181621 172239 160529 135093 198387 166785 134094 186805 TRUE FALSE 206330.4073 173849.7636 187676.1535 158166.5227 154225.8249 140234.0588 172338.5486 188584.3722 145757.2537 180709.5681 1.141779096 0.962039616 1.038551281 0.875252619 0.853445816 0.776019002 0.953676943 1.043577128 0.806582934 1 17.46331337 -4.33897169 0.936876023 0.903486874 1.465235236 0.391254473 0.086016571 4.616867912 1.816370298 0.029676246 3.211787208 4.58E-05 4.33897169 0.561748363 RDS(ph)DGVDGFEAEGKK ddPTM_A459_MK2206_30min_R2 2 RDSDGVDGFEAEGKK 15 2 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RDS(1)DGVDGFEAEGKK;RDS(1)DGVDGFEAEGKK 107.02 0.0049089 65829000 104984 111340 99337 97382 100876 70064 120895 89586 85347 107204 TRUE FALSE 113021.6558 105811.0175 102648.846 89425.57909 96915.10138 72730.33462 105021.3413 101295.1978 92770.32779 103705.9423 1.089828155 1.020298502 0.989806792 0.86229947 0.934518305 0.701313088 1.012683931 0.976754037 0.894551708 1 16.66213904 -5.339243661 1.942999731 0.907613714 1.07378005 0.315123947 0.085220662 0.452128017 3.13403959 0.0248367 0.087705816 4.58E-06 5.339243661 0.166166337 RDS(ph)ELGPGVK ddPTM_A459_MK2206_30min_R1 2 RDSELGPGVK 10 1 O95466;O95466-2;O95466-3;K7EK60;A0A0A0MR62 O95466 FMNL1 Formin-like protein 1 1 RDS(1)ELGPGVK;RDS(1)ELGPGVK 141.34 0.0023689 29966000 8501.9 8704.1 9343.7 8221.5 9075.7 7905.3 9247.2 9425.6 9036.8 8464.1 TRUE FALSE 7778.76876 8137.461508 8709.475677 8854.721355 8714.195651 8352.891254 8630.33616 9343.192973 9976.207699 9512.696609 0.817724887 0.855431624 0.915563277 0.930831889 0.916059453 0.878078173 0.90724392 0.982181326 1.04872552 1 13.21563865 -7.833400126 2.701058547 1.023691946 0.889093776 0.749116196 0.032948057 0.150252166 2.169563747 0.023924979 0.01003861 1.47E-08 7.833400126 -0.13459817 RDS(ph)ELGPGVK ddPTM_A459_MK2206_30min_R2 4 RDSELGPGVK 10 1 O95466;O95466-2;O95466-3;K7EK60;A0A0A0MR62 O95466 FMNL1 Formin-like protein 1 1 RDS(1)ELGPGVK;RDS(1)ELGPGVK;RDS(1)ELGPGVK;RDS(1)ELGPGVK 147.7 0.00041832 57866000 361833 528716 469552 528041 501915 515046 477839 397696 464051 461035 TRUE FALSE 389535.2127 502460.7323 485206.6293 484898.3612 482207.2952 534646.4364 415098.1653 449676.2327 504413.3172 445991.4657 0.873414051 1.126615128 1.087928058 1.087236861 1.081202965 1.198781765 0.930731185 1.008261967 1.130993205 1 18.76665658 -10.36950355 13.51068466 0.999999539 1.061654514 0.03372619 0.09218713 0 0 0.087321091 0.021178475 4.27E-11 10.36950355 0.061654976 RDS(ph)FDDRGPSLNPVLDYDHGSR ddPTM_A459_MK2206_30min_R1 1 RDSFDDRGPSLNPVLDYDHGSR 22 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 RDS(0.989)FDDRGPS(0.011)LNPVLDYDHGSR 111.57 1.73E-05 46154000 9945.6 4275.2 5634 3183 12787 12368 10885 7913.6 3041.3 3333.4 TRUE FALSE 9099.674494 3996.883703 5251.579777 3428.155212 12277.66671 13068.26547 10158.88151 7844.41223 3357.454018 3746.366758 2.428933172 1.066869306 1.401779408 0.915061294 3.277219639 3.488250435 2.711662303 2.09387194 0.896189358 1 11.87127643 -6.246505164 24.67259686 2.384768342 1.421898479 0.151479332 0.879575326 1144.894796 1891462.733 0.271036592 0.3484371 5.67E-07 6.246505164 -0.962869863 RDS(ph)FDDRGPSLNPVLDYDHGSR ddPTM_A459_MK2206_30min_R2 4 RDSFDDRGPSLNPVLDYDHGSR 22 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 RDS(0.5)FDDRGPS(0.5)LNPVLDYDHGSR;RDS(0.732)FDDRGPS(0.268)LNPVLDYDHGSR;RDS(0.685)FDDRGPS(0.185)LNPVLDY(0.129)DHGSR;RDS(0.994)FDDRGPS(0.006)LNPVLDYDHGSR 99.881 5.62E-05 201569000 24093.1 64816 31151.5 74960.8 73247.4 83687 52400.6 36622.4 56245.3 30723.8 TRUE FALSE 25937.68626 61597.33169 32190.07546 68836.26285 70371.33904 86871.76743 45520.33828 41409.07342 61137.41453 29721.28492 0.872697339 2.072498947 1.083064731 2.316059451 2.367708503 2.922880611 1.531573699 1.393246407 2.05702461 1 14.85920887 -5.762380879 24.99998217 1.999203704 1.415728212 0.168604854 0.592780051 46.45406492 1233576.27 0.167849973 0.266130563 1.73E-06 5.762380879 -0.583475492 RDS(ph)FDNCSLGESSK ddPTM_A459_MK2206_30min_R1 1 RDSFDNCSLGESSK 14 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RDS(1)FDNCSLGESSK 222.51 8.73E-09 14196000 3135.2 2304.2 2286 1863.8 2048.1 1709.4 1771.1 1674.5 1662.1 1377.7 TRUE FALSE 2868.534776 2154.196161 2130.832689 2007.350199 1966.51984 1806.184751 1652.953151 1659.860023 1834.881243 1548.379877 1.852604015 1.391258174 1.376169195 1.296419715 1.270049985 1.166499757 1.067537221 1.07199793 1.185032995 1 10.59654375 -1.522878745 0.390084647 1.076442816 11.9083005 0.900535026 0.073089312 20.6467897 0.278016091 0.054592998 170.4983117 0.03 1.522878745 10.83185768 RDS(ph)FDNCSLGESSK ddPTM_A459_MK2206_30min_R2 3 RDSFDNCSLGESSK 14 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RDS(0.994)FDNCS(0.006)LGES(0.001)SK;RDS(0.991)FDNCS(0.008)LGES(0.001)SK;RDS(1)FDNCSLGESSK 146.86 0.00082797 45851000 136708 186860 135094 180971 174326 137642 201925 161707 132067 137715 TRUE FALSE 147174.4696 177580.8041 139597.9665 166185.0904 167481.0853 142880.0628 175412.0049 182842.6601 143553.9489 133221.3708 1.10473619 1.332975355 1.047864661 1.247435673 1.257163804 1.07250107 1.316695691 1.372472442 1.077559464 1 17.02346601 -8.511640567 22.97460508 0.999999972 1.218131359 0.328846733 0.105907936 214.2890516 438077.1725 0.099463093 0.02568126 3.08E-09 8.511640567 0.218131387 RDS(ph)FIGTPYWMAPEVVMCETSK ddPTM_A459_MK2206_30min_R1 6 RDSFIGTPYWMAPEVVMCETSK 22 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 RDS(0.913)FIGT(0.081)PY(0.006)WMAPEVVMCETSK;RDS(0.541)FIGT(0.245)PY(0.212)WMAPEVVMCETSK;RDS(0.983)FIGT(0.016)PYWMAPEVVMCETSK;RDS(0.916)FIGT(0.045)PY(0.039)WMAPEVVMCETSK;RDS(0.994)FIGT(0.006)PYWMAPEVVMCETSK;RDS(0.956)FIGT(0.03)PY(0.015)WMAPEVVMCETSK 128.03 1.42E-05 764060700 15235.8 15567.9 15931.9 14313.64 15579.99 13799.7 14488.18 15794.08 13281.6 11732.35 TRUE FALSE 13939.9152 14554.42688 14850.48702 15416.07903 14959.40601 14581.02709 13521.69995 15655.99402 14662.26985 13185.84209 1.057188089 1.10379199 1.12624487 1.169138757 1.134505169 1.105809321 1.025471096 1.18733365 1.111970684 1 13.68670209 -6.998340176 24.81429752 1.092352887 1.120604841 0.079391151 0.05412334 170.4573308 2548273.697 0.01948606 0.017046019 1.00E-07 6.998340176 0.028251955 RDS(ph)FIGTPYWMAPEVVMCETSK ddPTM_A459_MK2206_30min_R2 6 RDSFIGTPYWMAPEVVMCETSK 22 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 RDS(0.896)FIGT(0.093)PY(0.011)WMAPEVVMCETSK;RDS(0.87)FIGT(0.104)PY(0.026)WMAPEVVMCETSK;RDS(0.349)FIGT(0.304)PY(0.347)WMAPEVVMCETSK;RDS(0.901)FIGT(0.088)PY(0.012)WMAPEVVMCETSK;RDS(0.867)FIGT(0.071)PY(0.062)WMAPEVVMCETSK;RDS(0.562)FIGT(0.382)PY(0.056)WMAPEVVMCETSK 92.664 0.0002197 118520600 127208.8 190710 156994.8 182399.1 184654.2 147694 167649.7 119626.2 162390.2 152193.3 TRUE FALSE 136948.0035 181239.6187 162228.9283 167496.5101 177403.7483 153314.5987 145637.093 135261.7551 176514.6061 147227.2451 0.930181119 1.231019562 1.101894749 1.137673329 1.204965482 1.041346651 0.989199336 0.918727746 1.198926231 1 17.16768515 -6.935931142 9.238893451 1.019271636 1.126967588 0.171519332 0.100020924 0.510623601 68.72356231 0.033802746 0.029803175 1.16E-07 6.935931142 0.107695953 RDS(ph)GDNSAPSGQER ddPTM_A459_MK2206_30min_R1 1 RDSGDNSAPSGQER 14 1 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 RDS(0.96)GDNS(0.039)APS(0.001)GQER 113.65 0.0057937 543470 172.63 181.04 155.48 0 128.73 66.787 123.35 121.82 0 0 TRUE FALSE 157.946912 169.2542631 144.9264508 0 123.6024115 70.56842222 115.1215466 120.7549406 0 0 0 RDS(ph)GDNSAPSGQER ddPTM_A459_MK2206_30min_R2 1 RDSGDNSAPSGQER 14 1 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 RDS(1)GDNSAPSGQER 183.75 0.00013905 3089900 12640 13693 11785 9941.6 8613.5 9985.6 9767 12441 8240.2 9982.1 TRUE FALSE 13607.72812 13013.02553 12177.90602 9129.339478 8275.290711 10365.60901 8484.581168 14067.08142 8956.917701 9656.384894 1.409194876 1.347608414 1.261124753 0.945420007 0.856976063 1.073446131 0.878649853 1.45676478 0.92756428 1 13.23726747 -5.596600544 4.164083566 1.029165453 1.365261477 0.461012099 0.160860582 0.198704508 6.664664672 0.045301236 0.083377137 2.53E-06 5.596600544 0.336096024 RDS(ph)IVAELDR ddPTM_A459_MK2206_30min_R2 1 RDSIVAELDR 10 1 M0QXB4;O14579-3;O14579 M0QXB4 COPE Coatomer subunit epsilon 1 RDS(1)IVAELDR 67.019 0.043155 2088200 4646.8 5203.5 4533 7454.3 4562.7 5582.6 4270.5 5056.6 6073.3 5901.2 TRUE FALSE 5002.562581 4945.101757 4684.127958 6845.259845 4383.545472 5795.049755 3709.77822 5717.514982 6601.544656 5708.644327 0.876313586 0.866248004 0.820532457 1.19910428 0.76787854 1.015135893 0.649852751 1.001553899 1.156411974 1 12.47893246 -7.993459302 24.99766794 1.078465033 0.889482225 0.237544387 0.141973308 212.1743407 810902.3917 0.074997887 0.035890002 1.02E-08 7.993459302 -0.188982807 RDS(ph)LEEGELR ddPTM_A459_MK2206_30min_R1 2 RDSLEEGELR 10 1 P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;A0A087X1I0;A0A087WYI9;E7ESP2;J3KS35;E9PFJ2;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 RDS(1)LEEGELR;RDS(1)LEEGELR 135.02 0.0019819 30632000 3813.9 4141.5 3734.8 3050.6 3538.3 3699.9 4708.4 3346.8 4153.7 4717.1 TRUE FALSE 3489.507777 3871.887597 3481.292182 3285.557741 3397.362019 3909.385141 4394.311227 3317.53928 4585.491979 5301.48996 0.658212654 0.730339513 0.656662977 0.61974233 0.640831548 0.737412533 0.828882307 0.625774887 0.864944009 1 12.37218216 -8.884642258 0.513557579 1.015805518 0.665208047 0.699678187 0.065315312 0.909789135 0.479879325 0.093619041 0.034337161 1.30E-09 8.884642258 -0.35059747 RDS(ph)LEEGELR ddPTM_A459_MK2206_30min_R2 2 RDSLEEGELR 10 1 P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;A0A087X1I0;A0A087WYI9;E7ESP2;J3KS35;E9PFJ2;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 RDS(1)LEEGELR;RDS(1)LEEGELR 150.14 0.00037034 87035000 70486 72944 72036 73984 78606 60208 81228 62113 54272 81915 TRUE FALSE 75882.46235 69321.70703 74437.64429 67939.27054 75519.53348 62499.25763 70562.66603 70231.38237 58992.48046 79242.12026 0.957602625 0.874808837 0.939369669 0.857363108 0.953022625 0.788712587 0.890469182 0.886288531 0.744458632 1 16.27397986 -6.742925252 24.99739208 0.856658997 0.912113442 0.128548514 0.069748331 493.5386407 666364.3572 0.021553293 0.021516497 1.81E-07 6.742925252 0.055454445 RDS(ph)LGAYASQDANEQGQDLGK ddPTM_A459_MK2206_30min_R1 2 RDSLGAYASQDANEQGQDLGK 21 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.997)LGAY(0.003)ASQDANEQGQDLGK;RDS(1)LGAYASQDANEQGQDLGK 215.83 7.56E-20 39382000 4941.6 6507.9 6456.5 4955.7 5655.9 6372.7 7733.6 5078.5 8472.7 9757.5 TRUE FALSE 4521.290971 6084.234527 6018.250769 5337.388873 5430.613526 6733.516767 7217.705655 5034.09921 9353.467485 10966.33277 0.412288325 0.554810314 0.548793375 0.486706813 0.4952078 0.614017184 0.658169491 0.459050379 0.85292574 1 13.42079354 -8.418241207 3.723362743 0.996134004 0.535183445 0.842616674 0.069901161 0.080650476 1.932877143 0.068446144 0.018082231 3.82E-09 8.418241207 -0.46095056 RDS(ph)LGAYASQDANEQGQDLGK ddPTM_A459_MK2206_30min_R2 4 RDSLGAYASQDANEQGQDLGK 21 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.986)LGAY(0.014)ASQDANEQGQDLGK;RDS(0.99)LGAY(0.01)ASQDANEQGQDLGK;RDS(0.979)LGAY(0.021)ASQDANEQGQDLGK;RDS(0.997)LGAY(0.003)ASQDANEQGQDLGK 173.03 5.06E-11 150203000 261223 303282 307108 334816 345106 300294 378808 310848 244938 355677 TRUE FALSE 281222.4337 288221.4569 317346.8274 307460.4618 331555.4044 311721.8986 329070.0546 351476.9009 266242.2645 344071.2886 0.817337694 0.837679476 0.922328709 0.893595229 0.963624154 0.90598056 0.956400797 1.021523482 0.773799713 1 18.39234798 -5.145219407 1.250832133 0.935749008 0.79281495 0.288045509 0.064461483 1.019406956 2.120225938 0.01918423 0.15927916 7.16E-06 5.145219407 -0.142934058 RDS(ph)LGAYASQDANEQGQDLGKR ddPTM_A459_MK2206_30min_R1 1 RDSLGAYASQDANEQGQDLGKR 22 2 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(1)LGAYASQDANEQGQDLGKR 151.6 2.03E-07 40913000 1302.3 1327.8 1908.7 1684.6 1627.4 1469.4 1436.5 1607.1 1457.8 1182.9 TRUE FALSE 1191.532546 1241.359979 1779.142762 1814.348184 1562.577212 1552.596158 1340.673706 1593.049294 1609.343527 1329.446582 0.89626207 0.933741901 1.338258179 1.36473944 1.175359155 1.167851479 1.00844496 1.198280033 1.210536435 1 10.3766101 -5.162830513 7.073562335 1.189157105 0.908342534 0.482572751 0.110956672 0.220914154 13.68661474 0.029890208 0.080603657 6.87E-06 5.162830513 -0.280814571 RDS(ph)LGTYSSR ddPTM_A459_MK2206_30min_R1 1 RDSLGTYSSR 10 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.998)LGT(0.001)YSSR 91.093 0.014639 55220000 1214.3 998.49 1307.4 1169.3 1110.5 1405.8 1300.7 1380.8 1348.3 1293.6 TRUE FALSE 1111.017408 933.4881195 1218.657331 1259.359689 1066.266433 1485.395181 1213.932676 1368.727811 1488.46061 1453.860934 0.764184099 0.642075248 0.838221388 0.866217435 0.733403318 1.021690002 0.834971659 0.941443421 1.023798477 1 10.50567356 -6.048211441 0.350081256 1.01687576 0.620577242 0.593651816 0.078747933 1.901885197 0.355138778 0.083317432 0.29691976 8.95E-07 6.048211441 -0.396298518 RDS(ph)LGTYSSR ddPTM_A459_MK2206_30min_R2 2 RDSLGTYSSR 10 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.999)LGT(0.001)YSSR;RDS(0.999)LGT(0.001)YSSR 95.183 0.011827 124475000 20759.5 23079 28834 35251 35172 46009 41018 33822 29953 30518 TRUE FALSE 22348.86328 21932.93042 29795.31117 32370.88054 33790.97055 47759.90474 35632.28733 38242.65153 32558.2578 29522.20016 0.757018893 0.742930076 1.009251038 1.096492821 1.144595266 1.617762378 1.206965847 1.295386229 1.102839816 1 14.84951262 -5.600671459 1.364708042 1.257934926 0.720071678 0.582854855 0.155947733 0.323910386 1.147099627 0.051320006 0.157747973 2.51E-06 5.600671459 -0.537863248 RDS(ph)LTGSSDLYK ddPTM_A459_MK2206_30min_R1 2 RDSLTGSSDLYK 12 1 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;E9PR38;Q14671-4;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 RDS(0.999)LT(0.001)GSSDLYK;RDS(0.922)LT(0.044)GS(0.017)S(0.017)DLYK 116.78 0.0025298 30529900 9250 7069.6 7658.1 5946.7 9133.3 9610.9 9404.7 8360.6 8260.5 9154.5 TRUE FALSE 8463.238926 6609.367755 7138.289509 6404.715864 8769.501321 10155.06085 8777.329623 8287.504156 9119.208535 10288.62857 0.822581831 0.642395409 0.693803791 0.622504333 0.852348907 0.987017928 0.853109777 0.805501345 0.886338589 1 13.32876307 -6.388468143 5.390650207 0.893564565 0.692364331 0.646865807 0.073603317 0.150298718 5.978346845 0.023136154 0.026243525 4.09E-07 6.388468143 -0.201200234 RDS(ph)LTGSSDLYK ddPTM_A459_MK2206_30min_R2 1 RDSLTGSSDLYK 12 1 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;E9PR38;Q14671-4;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 RDS(0.999)LTGS(0.001)S(0.001)DLYK 149.35 0.0010389 27101000 104180 84333 86339 81444 82092 68764 91140 71648 72707 96651 TRUE FALSE 112156.1009 80145.14585 89217.49917 74789.76467 78868.6556 71380.86221 79173.20852 81012.6396 79030.92344 93497.28579 1.199565313 0.857192219 0.954225552 0.799913752 0.84353952 0.763453844 0.846796865 0.866470496 0.845275056 1 16.51263686 RDS(ph)PLQGSGQQNSQAGQR ddPTM_A459_MK2206_30min_R1 3 RDSPLQGSGQQNSQAGQR 18 1 G5E948;A0A0D9SEY1;O95819-3;C9J840;A0A0D9SG62;H7C0P6;O95819-2;O95819-5;E7EX83;E7ENQ1;G3XAA2;H7C360;O95819-4;O95819;O95819-6;E7EN19 G5E948;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 RDS(1)PLQGSGQQNSQAGQR;RDS(1)PLQGSGQQNSQAGQR;RDS(1)PLQGSGQQNSQAGQR 157.14 1.11E-05 15369900 4387.66 4194.31 4104.96 3628.22 3941.95 3854.08 4478.37 4124.82 3435.29 3288.21 TRUE FALSE 4014.466476 3921.259657 3826.326752 3907.666133 3784.933784 4072.294679 4179.626109 4088.757134 3792.400689 3695.57828 1.08628912 1.061067947 1.035379706 1.057389626 1.024179032 1.101937064 1.130980267 1.1063917 1.026199529 1 11.85158442 -6.772966905 24.99718253 1.083368599 1.052597417 0.030684301 0.039615971 490.3135299 1063229.087 0.013852374 0.012323149 1.69E-07 6.772966905 -0.030771182 RDS(ph)PLQGSGQQNSQAGQR ddPTM_A459_MK2206_30min_R2 4 RDSPLQGSGQQNSQAGQR 18 1 G5E948;A0A0D9SEY1;O95819-3;C9J840;A0A0D9SG62;H7C0P6;O95819-2;O95819-5;E7EX83;E7ENQ1;G3XAA2;H7C360;O95819-4;O95819;O95819-6;E7EN19 G5E948;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 RDS(1)PLQGSGQQNSQAGQR;RDS(1)PLQGSGQQNSQAGQR;RDS(1)PLQGSGQQNSQAGQR;RDS(1)PLQGSGQQNSQAGQR 135.55 0.00018418 41658000 34184.4 39871.3 36893.4 41761.4 40581.9 41563.5 46073.4 38511.8 42291.8 36866.3 TRUE FALSE 36801.58395 37891.34922 38123.40754 38349.36003 38988.4507 43145.22812 40023.90724 43545.42449 45970.26432 35663.35565 1.031915906 1.062472909 1.068979821 1.075315526 1.093235619 1.209791601 1.122269806 1.221013101 1.289005577 1 15.12215484 -6.617173319 4.246919705 1.179117997 1.062701744 0.337171845 0.071695821 0.235400313 7.780493177 0.023514311 0.023536924 2.41E-07 6.617173319 -0.116416253 RDS(ph)PPPPAR ddPTM_A459_MK2206_30min_R1 4 RDSPPPPAR 9 1 O96013;O96013-2;O96013-4;M0R2X4 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR 102.05 0.0084603 346515000 8876.41 8667.2 8291.39 7670.69 7389 7686.07 8535.26 8022.94 3072.84 7005.55 TRUE FALSE 8121.424718 8102.963705 7728.593548 8261.487873 7094.680484 8121.248641 7965.888379 7952.796281 3392.272714 7873.450423 1.031494997 1.02915028 0.981601856 1.049284295 0.901089116 1.031472633 1.011740463 1.010077648 0.430849568 1 12.9427803 -8.191406103 24.99871387 0.715422313 1.004736055 0.431946316 0.133166481 115.3057057 41158.76714 0.080351381 0.030369957 6.44E-09 8.191406103 0.289313741 RDS(ph)PPPPAR ddPTM_A459_MK2206_30min_R2 4 RDSPPPPAR 9 1 O96013;O96013-2;O96013-4;M0R2X4 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR 89.266 0.015451 423533200 79368.9 89512.94 86677.5 78853.5 80211.3 84097 96266.8 63942 84573.2 80727.7 TRUE FALSE 85445.44401 85067.85756 89567.28459 72410.91681 77061.80133 87297.37026 83626.85352 72299.43895 91929.22406 78093.56176 1.094141976 1.089306924 1.146922775 0.927232862 0.98678815 1.117856175 1.070854647 0.925805371 1.177167771 1 16.25291599 -5.721568509 24.99993693 1.0299338 1.108042188 0.192696125 0.075687837 270.8910287 169852.732 0.020278927 0.03512355 1.90E-06 5.721568509 0.078108388 RDS(ph)PTYDPYK ddPTM_A459_MK2206_30min_R1 2 RDSPTYDPYK 10 1 F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8;Q8N2M8-4 F5H0Q6 CLASRP CLK4-associating serine/arginine rich protein 1 RDS(0.996)PT(0.004)YDPYK;RDS(0.998)PT(0.002)YDPYK 143.42 0.0019599 31219000 8834.6 10162.3 9331 7192.5 7948 7000.7 7967.7 7394.5 8187.8 8613.3 TRUE FALSE 8083.170878 9500.732423 8697.637718 7746.467596 7631.41433 7397.073584 7436.189271 7329.850666 9038.95111 9680.380631 0.83500548 0.981442031 0.898480964 0.800223451 0.78833825 0.764130448 0.768171165 0.757186204 0.933739225 1 13.24084806 -5.701868755 5.521335615 0.813054267 0.914878581 0.121595468 0.082910343 0.287219776 17.42684677 0.021726529 0.037695923 1.99E-06 5.701868755 0.101824314 RDS(ph)PTYDPYK ddPTM_A459_MK2206_30min_R2 2 RDSPTYDPYK 10 1 F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8;Q8N2M8-4 F5H0Q6 CLASRP CLK4-associating serine/arginine rich protein 1 RDS(0.997)PT(0.003)YDPYK;RDS(0.983)PT(0.017)YDPYK 130.69 0.0049151 30278800 215821 178472 165820 182411 167266 130331 195542 157819 133451 187994 TRUE FALSE 232344.4217 169609.34 171348.356 167507.4378 160698.2964 135290.8375 169867.1005 178446.4852 145058.3268 181859.7712 1.277602079 0.932638037 0.942200438 0.921080219 0.883638505 0.743929439 0.934055396 0.98123122 0.797638344 1 17.47246692 RDS(ph)PTYDPYKR ddPTM_A459_MK2206_30min_R2 1 RDSPTYDPYKR 11 2 F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8;Q8N2M8-4 F5H0Q6 CLASRP CLK4-associating serine/arginine rich protein 1 RDS(0.993)PT(0.005)Y(0.002)DPYKR 60.167 0.038197 46603000 118280 99599 109080 104020 104790 85064 119430 96622 55790 121510 TRUE FALSE 127335.6077 94653.05849 112716.6728 95521.23326 100675.4181 88301.17013 103748.6975 109250.8272 60642.51335 117545.1387 1.083291144 0.805248601 0.958922454 0.812634485 0.856483043 0.751210736 0.882628569 0.929437222 0.515908306 1 16.84285535 -2.527104198 1.456148342 0.830476493 199.6262443 0.238548336 0.129448141 1611.629488 5.656724326 0.034851792 1067944.629 0.002970953 2.527104198 198.7957679 RDS(ph)QDGSSYR ddPTM_A459_MK2206_30min_R1 1 RDSQDGSSYR 10 1 Q14847;Q14847-2;C9J9W2;Q14847-3;J3KSN1 Q14847 LASP1 LIM and SH3 domain protein 1 1 RDS(1)QDGSSYR 166.24 0.00059671 11805000 4870 4440 3185.7 3068.8 2264 2778.2 5138.1 3993.6 302.25 4116.6 TRUE FALSE 4455.780927 4150.955193 2969.46356 3305.159508 2173.820086 2935.499283 4795.346724 3958.684376 333.6699691 4626.595487 0.963079858 0.89719432 0.641824765 0.714382642 0.469853068 0.63448367 1.036474172 0.855636588 0.072119979 1 12.17573525 -5.171756703 4.239320667 0.677990879 0.947249456 0.131383348 0.260708047 0.46614585 14.82162489 0.06705123 0.197512176 6.73E-06 5.171756703 0.269258578 RDS(ph)QDGSSYR ddPTM_A459_MK2206_30min_R2 5 RDSQDGSSYR 10 1 Q14847;Q14847-2;C9J9W2;Q14847-3;J3KSN1 Q14847 LASP1 LIM and SH3 domain protein 1 1 RDS(1)QDGSSYR;RDS(1)QDGSSYR;RDS(0.992)QDGS(0.004)S(0.004)YR;RDS(1)QDGSSYR;RDS(0.979)QDGS(0.01)S(0.01)YR 112.44 0.0042295 445254490 78134.4 76429.65 78449.54 77059.3 69550.1 79064 81419.4 74836.64 73641.54 78512.5 TRUE FALSE 84116.42974 72634.26472 81065.00851 70763.30869 66819.21361 82072.83592 70728.93498 84618.0458 80046.74804 75950.64355 1.107514378 0.956335079 1.067338007 0.931701239 0.879771526 1.080607511 0.931248659 1.114118878 1.053931136 1 16.21277457 -7.76591591 24.99991716 1.06301874 0.991511638 0.127952278 0.073987627 212.3643704 1185949.177 0.037803093 0.019135448 1.71E-08 7.76591591 -0.071507102 RDS(ph)QGTYSSR ddPTM_A459_MK2206_30min_R2 2 RDSQGTYSSR 10 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.73)QGT(0.201)YS(0.047)S(0.021)R;RDS(0.999)QGT(0.001)YSSR 110.8 0.0070062 6574400 15955.8 15518.1 15074.3 14981.3 15742.7 13876.3 15952.1 23934 17230.8 17866.5 TRUE FALSE 17177.38832 14747.49372 15576.86964 13757.27987 15124.5625 14404.37232 13857.57011 27062.25598 18729.50384 17283.51757 0.993859511 0.85326923 0.901255753 0.79597685 0.875085898 0.833416708 0.801779502 1.565784041 1.08366273 1 14.07710925 -7.732217108 24.9999717 1.243542915 0.862420457 0.542822084 0.147199303 127.5050551 109082.0384 0.064127143 0.037016563 1.85E-08 7.732217108 -0.381122459 RDS(ph)SDDWEIPDGQITVGQR ddPTM_A459_MK2206_30min_R1 3 RDSSDDWEIPDGQITVGQR 19 1 H7C560;A0A2R8Y8E0;A0A2U3TZI2;P15056;A0A2R8Y679;A0A2R8Y492;A0A2R8YDP5 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 RDS(0.5)S(0.5)DDWEIPDGQITVGQR;RDS(0.5)S(0.5)DDWEIPDGQITVGQR;RDS(0.974)S(0.026)DDWEIPDGQITVGQR 142.98 7.68E-05 25692900 3201.74 3085.15 3302.15 2685.57 3966.13 3296.8 3296.43 3077.78 3149.34 2762.39 TRUE FALSE 2929.4152 2884.306174 3078.009258 2892.413067 3808.150644 3483.461967 3076.531169 3050.871294 3476.725163 3104.615728 0.943567725 0.92903806 0.991430028 0.931649299 1.226609338 1.122026773 0.990953934 0.982688861 1.119856841 1 11.600199 RDS(ph)SDDWEIPDGQITVGQR ddPTM_A459_MK2206_30min_R2 3 RDSSDDWEIPDGQITVGQR 19 1 H7C560;A0A2R8Y8E0;A0A2U3TZI2;P15056;A0A2R8Y679;A0A2R8Y492;A0A2R8YDP5 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 RDS(0.5)S(0.5)DDWEIPDGQITVGQR;RDS(0.97)S(0.03)DDWEIPDGQITVGQR;RDS(0.5)S(0.5)DDWEIPDGQITVGQR 116.92 0.00023781 24557000 17264.6 22082.6 18599.4 23984.3 22509.3 24739.3 23117 14898.8 21989 20698.5 TRUE FALSE 18586.39105 20986.0102 19219.49471 22024.70597 21625.47178 25680.7714 20081.71013 16846.12432 23901.56347 20023.10964 0.92824698 1.048089461 0.959865628 1.099964309 1.080025639 1.282556599 1.002926643 0.841334069 1.193698876 1 14.28937843 -4.320633608 0.973879567 1.065063735 0.739036852 0.104719908 0.115473607 11.29093439 4.622913775 0.039198721 4.791411315 4.78E-05 4.320633608 -0.326026882 RDS(ph)SDTTPLLNGSSQDR ddPTM_A459_MK2206_30min_R1 3 RDSSDTTPLLNGSSQDR 17 1 E9PCW1;B4DQA8 E9PCW1 GOSR1 Golgi SNAP receptor complex member 1 1 RDS(0.978)S(0.022)DTTPLLNGSSQDR;RDS(0.955)S(0.043)DT(0.002)T(0.001)PLLNGSSQDR;RDS(0.5)S(0.5)DTTPLLNGSSQDR 218.66 1.44E-11 3382700 3481.71 3041.31 2774.86 2280.88 3422.54 2632.56 3125.76 3224.54 2997.11 2307.3 TRUE FALSE 3185.572281 2843.320166 2586.510234 2456.553773 3286.212984 2781.613272 2917.246254 3196.348187 3308.67031 2593.145743 1.228458635 1.096475265 0.997441135 0.947325764 1.267268912 1.072679112 1.124983531 1.23261417 1.275929175 1 11.34048758 -6.267377979 24.99985396 1.16753507 1.064501343 0.161554938 0.10532769 883.7784698 3720453.629 0.033211157 0.03863187 5.40E-07 6.267377979 -0.103033727 RDS(ph)SDTTPLLNGSSQDR ddPTM_A459_MK2206_30min_R2 1 RDSSDTTPLLNGSSQDR 17 1 E9PCW1;B4DQA8 E9PCW1 GOSR1 Golgi SNAP receptor complex member 1 1 RDS(0.944)S(0.056)DT(0.001)TPLLNGSSQDR 188.1 1.20E-07 5669400 23874 22648 19752 17478 20315 20768 20803 11830 20283 20218 TRUE FALSE 25701.8118 21523.33325 20410.52182 16049.99149 19517.33103 21558.34079 18071.54111 13376.22162 22047.17868 19558.28832 1.314113555 1.100471212 1.043574033 0.820623524 0.997905886 1.10226112 0.923983777 0.68391576 1.127255019 1 14.25549249 -4.795512058 1.40067267 0.945724606 1.457735806 0.439843723 0.123860534 1.131031762 2.043660403 0.03643158 0.818900082 1.60E-05 4.795512058 0.5120112 RDS(ph)SESQLASTESDKPTTGR ddPTM_A459_MK2206_30min_R1 4 RDSSESQLASTESDKPTTGR 20 2 A0A087WVF1;Q96B23-2;Q96B23;K7EQH1 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 RDS(0.935)S(0.059)ES(0.006)QLASTESDKPTTGR;RDS(0.822)S(0.083)ES(0.083)QLAS(0.011)T(0.001)ESDKPTTGR;RDS(0.901)S(0.066)ES(0.033)QLASTESDKPTTGR;RDS(0.933)S(0.065)ES(0.002)QLASTESDKPTTGR 125.08 0.00025896 98653000 3619.42 2762.34 3607.23 3040.14 3485.73 3361.38 3347.87 3176.52 2737.17 2804.82 TRUE FALSE 3311.569323 2582.511164 3362.381278 3274.29211 3346.885993 3551.698431 3124.539701 3148.748021 3021.708617 3152.302277 1.05052404 0.819246042 1.066643038 1.038698647 1.061727493 1.126699827 0.991192921 0.998872489 0.958571974 1 11.62219017 -5.30350681 24.99787564 1.033728955 0.934884641 0.235084756 0.068622748 568.0950223 337580.0884 0.017625315 0.036690494 4.97E-06 5.30350681 -0.098844314 RDS(ph)SESQLASTESDKPTTGR ddPTM_A459_MK2206_30min_R2 1 RDSSESQLASTESDKPTTGR 20 2 A0A087WVF1;Q96B23-2;Q96B23;K7EQH1 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 RDS(0.679)S(0.159)ES(0.159)QLAS(0.003)T(0.001)ESDKPTTGR 76.329 0.038189 0 5591.1 5740.4 5248.1 5776.6 6585.9 6660.4 6569.1 5245.5 5309.4 6491.2 TRUE FALSE 6019.158915 5455.340083 5423.069035 5304.633302 6327.304475 6913.866189 5706.569279 5931.10486 5771.202015 6279.392676 0.958557495 0.868768743 0.863629544 0.844768527 1.007630005 1.101040586 0.908777261 0.944534793 0.919070094 1 12.61640932 -6.264579959 24.9925924 0.979875544 0.881397943 0.397702996 0.057989685 305.1718499 2428535.786 0.018998678 0.02245439 5.44E-07 6.264579959 -0.098477601 RDS(ph)YYDR ddPTM_A459_MK2206_30min_R2 1 RDSYYDR 7 1 Q13595;Q13595-4;Q13595-3 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RDS(0.998)Y(0.002)YDR 61.593 0.047247 4510500 8690 9128.7 7939 9422.5 8891 10947 6948.2 6715.9 7210.4 8057.9 TRUE FALSE 9355.313081 8675.382032 8203.682298 8652.651609 8541.894666 11363.59576 6035.892994 7593.691189 7837.547559 7794.971383 1.200172858 1.112945976 1.052432638 1.110029939 1.095821171 1.457811094 0.774331642 0.9741782 1.005462005 1 12.92832801 -7.287048746 24.99999527 0.936341175 1.157221469 0.466479916 0.121509655 758.6160183 740561.5812 0.051109706 0.034471338 5.16E-08 7.287048746 0.220880295 RDSFDDR ddPTM_A459_MK2206_30min_R2 1 RDSFDDR 7 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 0 86.794 0.046593 5131100 8384.3 7946.8 9093.7 9505.6 9897 7996.5 11360 11662 9135.3 10741 FALSE TRUE 9026.208454 7552.173468 9396.879419 8728.962073 9508.394052 8300.812411 9868.418354 13186.26344 9929.871881 10390.52205 0.868696338 0.726832919 0.904370288 0.840088884 0.91510263 0.798883095 0.949751928 1.269066499 0.955666311 1 13.34298052 -7.527987152 24.95962235 1.089301741 0.845706332 0.565279221 0.091262973 90.62684788 442791.9024 0.039990059 0.023189533 2.96E-08 7.527987152 -0.243595409 RDSFDDRGPS(ph)LNPVLDYDHGSR ddPTM_A459_MK2206_30min_R1 4 RDSFDDRGPSLNPVLDYDHGSR 22 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 RDS(0.077)FDDRGPS(0.923)LNPVLDYDHGSR;RDS(0.222)FDDRGPS(0.778)LNPVLDYDHGSR;RDS(0.476)FDDRGPS(0.524)LNPVLDYDHGSR;RDS(0.135)FDDRGPS(0.865)LNPVLDYDHGSR 122.13 1.27E-05 62348100 21611.6 11919.27 13816.7 10506.91 27842.5 25412.9 22590.7 16881.1 10663.35 9706.16 TRUE FALSE 19773.41993 11143.32336 12878.8609 11316.15403 26733.47427 26851.75644 21083.71562 16733.51032 11771.84339 10908.63238 1.812639683 1.021514244 1.180611873 1.037357721 2.450671481 2.461514469 1.93275517 1.533969589 1.079131002 1 13.41318262 -6.227385483 24.97853457 1.815118498 1.239892579 0.169760559 0.504083092 1007.129138 738729.2301 0.156549428 0.202093119 5.92E-07 6.227385483 -0.575225919 RDSFDDRGPS(ph)LNPVLDYDHGSR ddPTM_A459_MK2206_30min_R2 2 RDSFDDRGPSLNPVLDYDHGSR 22 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 RDS(0.133)FDDRGPS(0.867)LNPVLDYDHGSR;RDS(0.027)FDDRGPS(0.973)LNPVLDYDHGSR 86.575 0.00022558 46822000 22344.9 63367 40295.2 90002 81890 107592 67049.6 40419.9 72899 41273.8 TRUE FALSE 24055.64272 60220.28692 41638.62186 82648.5487 78674.58714 111686.489 58245.90698 45702.91971 79239.62325 39927.03929 0.602490021 1.508258263 1.042867756 2.069989415 1.97045883 2.797264484 1.458808567 1.144660875 1.984610546 1 15.28507848 -5.751663074 24.91319381 1.818690455 1.096910391 0.282750045 0.523639752 263.8698046 672418.8337 0.146349556 0.249496013 1.77E-06 5.751663074 -0.721780064 RDSFDNCS(ph)LGESSK ddPTM_A459_MK2206_30min_R1 1 RDSFDNCSLGESSK 14 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RDS(0.361)FDNCS(0.638)LGES(0.001)SK 169.15 0.00032878 14118000 4613.3 3910.9 4221.6 3592.6 3644 3480.9 2748.4 2948.3 3114.5 3111.3 TRUE FALSE 4220.91461 3656.299699 3935.049554 3869.302674 3498.851764 3677.98555 2565.059251 2922.523324 3438.26342 3496.751333 1.207096018 1.045627599 1.125344407 1.106542132 1.000600681 1.051829312 0.73355495 0.835782429 0.983273643 1 11.77179949 -6.854121079 1.928473071 0.879029621 1.10809595 0.540648074 0.088927078 0.244971019 1.870251086 0.03711774 0.031856069 1.40E-07 6.854121079 0.229066329 RDSFDNCS(ph)LGESSK ddPTM_A459_MK2206_30min_R2 1 RDSFDNCSLGESSK 14 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RDS(0.036)FDNCS(0.952)LGES(0.009)S(0.003)K 128.82 0.0019812 13132000 35281 48755 36194 38780 39217 36719 53514 39297 31796 32020 TRUE FALSE 37982.14049 46333.8976 37400.6899 35611.54995 37677.14353 38116.36728 46487.54752 44433.25283 34561.55861 30975.19002 1.226211702 1.495839011 1.207440208 1.14967979 1.21636521 1.230545067 1.50079943 1.434478781 1.115781972 1 14.91882551 -5.302248002 24.97944984 1.253469272 1.361025867 0.091372353 0.151090618 1238.342166 758002.0772 0.040510783 0.084331849 4.99E-06 5.302248002 0.107556595 RDSFIGT(ph)PYWMAPEVVMCETSK ddPTM_A459_MK2206_30min_R1 1 RDSFIGTPYWMAPEVVMCETSK 22 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 RDS(0.286)FIGT(0.384)PY(0.331)WMAPEVVMCETSK 50.776 0.014293 7075500 1132.7 1313.4 1042.9 1057.4 971.85 899.3 945.73 954.93 1054.9 767.04 TRUE FALSE 1036.357917 1227.897421 972.1108537 1138.841131 933.1391566 950.2175888 882.6420773 946.5811477 1164.56063 862.0667061 1.202178335 1.424364742 1.127651546 1.321059175 1.082444259 1.102255292 1.023867493 1.098037009 1.350893871 1 9.751655698 -6.266688734 24.82377928 1.109832674 1.269841264 0.319143926 0.113933044 485.310982 2294992.921 0.034329819 0.040072729 5.41E-07 6.266688734 0.16000859 RDSFIGT(ph)PYWMAPEVVMCETSK ddPTM_A459_MK2206_30min_R2 1 RDSFIGTPYWMAPEVVMCETSK 22 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 RDS(0.119)FIGT(0.866)PY(0.015)WMAPEVVMCETSK 89.47 0.00067152 9649700 26426 41366 32473 34823 39673 34275 38327 26596 37044 37781 TRUE FALSE 28449.19488 39311.82459 33555.63361 31977.84951 38115.23868 35579.35914 33294.61886 30072.18852 40266.02016 36548.20906 0.778401886 1.075615621 0.918119779 0.874949835 1.042875688 0.973491179 0.910978122 0.822808813 1.101723482 1 15.15751309 -1.52312874 0.010303386 1.784021313 2.07E-05 0.07341696 0.098293784 46391.29636 37.08660299 2755.000799 3735.40423 0.029982736 1.52312874 -1.784000602 RDSGDNS(ph)APSGQER ddPTM_A459_MK2206_30min_R2 1 RDSGDNSAPSGQER 14 1 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 RDS(0.12)GDNS(0.88)APSGQER 145.94 0.00091122 4734400 8337.9 5000.5 3695 3767.7 4133.5 4188.6 5797.2 6451.6 5035.7 5374 TRUE FALSE 8976.256035 4752.182441 3818.189456 3459.866858 3971.198021 4348.000108 5036.020676 7294.846272 5473.696084 5198.64682 1.726652405 0.914119117 0.734458329 0.6655322 0.763890712 0.836371513 0.968717601 1.403220208 1.052907857 1 12.34392043 -7.545143862 23.94601596 1.174032494 0.908590065 0.086871645 0.29703442 309.5046415 332864.17 0.143598799 0.082916473 2.85E-08 7.545143862 -0.265442429 RDSQGTYS(ph)SR ddPTM_A459_MK2206_30min_R2 1 RDSQGTYSSR 10 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.206)QGT(0.054)YS(0.37)S(0.37)R 128.88 0.0054641 3073000 4059.5 5120.3 4468.5 6624.8 6455.8 3922.3 6479.6 8702.3 5643 6888.5 TRUE FALSE 4370.298441 4866.033348 4617.47756 6083.532648 6202.312854 4071.565875 5628.820737 9839.720489 6133.81794 6663.728809 0.655833778 0.730226797 0.692926992 0.912932207 0.930757093 0.611004138 0.84469535 1.476608783 0.920478326 1 12.70211397 -7.546444682 24.47970962 1.151256945 0.763482715 0.509344056 0.16529646 138.0042437 143353.1638 0.07453878 0.04303827 2.84E-08 7.546444682 -0.38777423 RDSS(ph)DDWEIPDGQITVGQR ddPTM_A459_MK2206_30min_R2 1 RDSSDDWEIPDGQITVGQR 19 1 H7C560;A0A2R8Y8E0;A0A2U3TZI2;P15056;A0A2R8Y679;A0A2R8Y492;A0A2R8YDP5 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 RDS(0.262)S(0.738)DDWEIPDGQITVGQR 113.52 0.0002706 8229200 10015 13126 12768 10372 11664 12160 13238 9607 12631 10039 TRUE FALSE 10781.7561 12474.18193 13193.67875 9524.574422 11206.01275 12622.75732 11499.8347 10862.66789 13729.62155 9711.428252 1.110213227 1.284484795 1.358572437 0.980759387 1.153899556 1.299783821 1.184154833 1.118544832 1.413759253 1 13.24546777 RDT(ph)DSDTQDANDSSCK ddPTM_A459_MK2206_30min_R1 2 RDTDSDTQDANDSSCK 16 1 Q9Y2H0-3;Q9Y2H0;Q9Y2H0-1;F8WF49;A0A0B4J2C2;A0A087WWE6;A0A087X246 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 RDT(0.873)DS(0.121)DT(0.006)QDANDSSCK;RDT(0.901)DS(0.099)DTQDANDSSCK 155.49 0.00058825 1957400 1999.82 2241.81 2081.07 1630.45 2054.89 1659.12 2144.4 2148.9 1238.55 1633.48 TRUE FALSE 1829.724808 2095.867762 1939.812767 1756.027542 1973.03938 1753.057941 2001.350989 2130.112394 1367.301705 1835.847835 0.996664742 1.141634792 1.056630473 0.956521291 1.074729257 0.954903728 1.090150802 1.160288099 0.74477943 1 10.84223077 -8.257633576 24.99657668 0.872389719 1.052304662 0.409805123 0.087132194 289.2720076 1899976.366 0.061514706 0.021230172 5.53E-09 8.257633576 0.179914943 RDTVSLY(ph)QRT(ph)LEQR ddPTM_A459_MK2206_30min_R2 1 RDTVSLYQRTLEQR 14 2 Q96JK9 Q96JK9 MAML3 Mastermind-like protein 3 2 RDTVSLY(1)QRT(1)LEQR 101.3 0.038474 7272200 27405 23173 25334 34649 23411 25857 25948 27846 28038 26469 TRUE FALSE 29503.14787 22022.26252 26178.62292 31818.06586 22491.76651 26841.00625 22540.99643 31485.56781 30476.69456 25605.3187 1.152227325 0.860065941 1.022390044 1.242635026 0.878402131 1.048259019 0.880324775 1.229649519 1.190248593 1 14.6441559 -7.776416466 24.99996972 1.157461777 1.011717863 0.169709222 0.1279182 386.5264726 645186.3325 0.06745448 0.032611915 1.67E-08 7.776416466 -0.145743914 RDVQEIFR ddPTM_A459_MK2206_30min_R2 3 RDVQEIFR 8 1 O00148;O00148-2;O00148-3;K7EQN7;Q13838;Q13838-2;F6S4E6;A0A0A0MT12;F6TRA5;F6WLT2;A0A0G2JJZ9;Q5STU3;A0A140T9L4;A0A140T973;A0A140T9K1;A0A140T9X9;A0A140T996;F6UJC5;A0A140TA18;A0A140T9X3 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B 0 ;; 146.79 0.0024373 8464100 24642.2 46175 40400.3 49854 45005 44386 46232 37804 43414 42960 FALSE TRUE 26528.82578 43882.01664 41747.22584 45780.76872 43237.87757 46075.14033 40161.68287 42745.1126 47190.07125 41558.21872 0.638353293 1.055916687 1.004548008 1.101605654 1.040417008 1.108689009 0.966395676 1.028559787 1.135517178 1 15.3428462 -4.760873321 24.99973863 1.049223843 0.638352825 0.855925932 0.050552236 4.625740267 204117.0182 0.012137699 0.06992819 1.73E-05 4.760873321 -0.410871018 RDVYLS(ph)PR ddPTM_A459_MK2206_30min_R1 4 RDVYLSPR 8 1 H3BT71;H0Y6E7;P38159;P38159-2;H3BUY5;Q96E39 H3BT71;P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 1 RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR 128.28 0.0022426 137438000 16292.4 15638.5 16117.9 14372.8 16933.3 14391.8 15884.3 13034.6 13969.7 11319.4 TRUE FALSE 14906.64583 14620.43081 15023.86186 15479.79555 16258.8108 15206.65128 14824.68733 12920.63987 15421.90031 12721.73273 1.171746502 1.149248386 1.180960344 1.216799305 1.278034302 1.195328624 1.165304102 1.015635224 1.212248413 1 13.63500756 -8.547635739 0.608163936 1.007099315 1.198917332 0.431743834 0.062288662 0.865319589 0.744368992 0.067184885 0.028597276 2.83E-09 8.547635739 0.191818017 RDVYLS(ph)PR ddPTM_A459_MK2206_30min_R2 4 RDVYLSPR 8 1 H3BT71;H0Y6E7;P38159;P38159-2;H3BUY5;Q96E39 H3BT71;P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 1 RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR 101.93 0.0085404 220970000 186510 223455 198602 241704 215415 234968 239914 190076 178996 216600 TRUE FALSE 200789.349 212358.5496 205223.2916 221956.01 206956.7247 243909.8719 208413.0036 214919.5858 194564.7485 209532.3597 0.958273697 1.013488083 0.979434832 1.059292275 0.987707698 1.164067795 0.994657836 1.025710712 0.928566589 1 17.67681354 -1.564630629 16.892542 1.015498827 0.005085683 0 0.061382716 0 0 0.013833212 0 0.02725018 1.564630629 -1.010413144 RDYDDMS(ph)PR ddPTM_A459_MK2206_30min_R1 5 RDYDDMSPR 9 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR 168.85 0.0013332 606604000 39461.1 34916.3 36272.4 35566.3 39597.5 31606.4 34966.4 35646 25249.2 26741.8 TRUE FALSE 36104.72623 32643.24252 33810.33055 38305.62259 38020.24773 33395.92705 32633.85526 35334.35078 27873.9447 30054.77607 1.201297462 1.086124962 1.124956994 1.274526967 1.265031808 1.11116872 1.085812623 1.175665082 0.927438109 1 14.87530665 -8.257092605 24.72507022 0.963719041 1.16404587 0.60206944 0.06563199 215.1989285 1224103.105 0.052201466 0.018157649 5.53E-09 8.257092605 0.200326829 RDYDDMS(ph)PR ddPTM_A459_MK2206_30min_R2 2 RDYDDMSPR 9 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 RDYDDMS(1)PR;RDYDDMS(1)PR 145.09 0.0033925 924140000 458100 587640 466450 580470 598130 476880 487150 559380 500620 544040 TRUE FALSE 493172.4882 558458.6521 482001.2102 533043.7442 574644.4108 495028.0026 423186.6198 632492.8866 544163.0227 526288.0194 0.937077171 1.061127428 0.915850623 1.012836554 1.091881992 0.940602834 0.804097004 1.201799895 1.033964298 1 19.00549303 -7.779985841 24.99994973 1.088411458 0.973566104 0.241231253 0.090174713 362.0716538 488052.3149 0.049036551 0.023622397 1.66E-08 7.779985841 -0.114845354 RDYDDMSPR ddPTM_A459_MK2206_30min_R1 3 RDYDDMSPR 9 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ;; 154.85 0.0011507 18258800 5439.4 5534.6 5988.4 5158.6 5908.2 5208.5 5554.5 5348.8 4017.94 4707.2 FALSE TRUE 4976.750467 5174.296534 5581.924093 5555.916266 5672.863883 5503.400769 5183.96944 5302.036006 4435.619241 5290.363474 0.940719951 0.978060687 1.055111642 1.050195567 1.072301348 1.040268934 0.979889088 1.002206376 0.838433742 1 12.36915113 -8.078251738 8.69956238 0.918779749 1.01889403 0.34578592 0.052872758 0.412968381 42.70121004 0.036357753 0.013701966 8.35E-09 8.078251738 0.100114281 RDYDDMSPR ddPTM_A459_MK2206_30min_R2 2 RDYDDMSPR 9 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 115.23 0.011138 18257600 31451 51840 45052 54098 52986 55543 48543 34955 44508 43087 FALSE TRUE 33858.91274 49265.70098 46554.01119 49678.02035 50905.50341 57656.72779 42169.24579 39523.73852 48379.22539 41681.07472 0.812333007 1.181968107 1.116910049 1.191860351 1.221309761 1.383283137 1.011712056 0.948241829 1.160700047 1 15.34710486 REAALPPVS(ph)PLK ddPTM_A459_MK2206_30min_R2 1 REAALPPVSPLK 12 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 REAALPPVS(1)PLK 93.495 0.01038 5797700 36016 39797 33063 31292 33372 25856 35481 22612 25852 30032 TRUE FALSE 38773.41265 37820.73885 34165.30392 28735.3435 32061.6476 26839.9682 30822.30208 25567.46604 28100.56023 29052.0583 1.334618437 1.301826482 1.176002869 0.98909837 1.10359298 0.923857715 1.060933506 0.880056958 0.967248514 1 14.82635276 -5.428184601 0.965965606 0.969936255 1.400389683 0.830387206 0.060459841 0.329862259 0.464724675 0.021707318 0.120195913 3.73E-06 5.428184601 0.430453429 REASSSS(ph)PEAGEGQIR ddPTM_A459_MK2206_30min_R1 1 REASSSSPEAGEGQIR 16 1 J3QSS7;Q86U28-2;Q86U28 J3QSS7 ISCA2 "Iron-sulfur cluster assembly 2 homolog, mitochondrial" 1 REAS(0.063)S(0.063)S(0.204)S(0.67)PEAGEGQIR 91.932 0.020095 1884700 975.09 846.93 931.81 826.91 1296.7 1048.7 1242.2 1064.6 882.4 576.78 TRUE FALSE 892.1534751 791.7947031 868.5613334 890.5987515 1245.049693 1108.076488 1159.335105 1055.292314 974.1286377 648.2358609 1.376279112 1.221460815 1.339884733 1.37388072 1.920673891 1.709372398 1.78844642 1.627944978 1.502737964 1 9.340375024 -6.030913918 20.53379999 1.639448009 1.312341232 0.221768308 0.233880226 89.2897584 59308.54385 0.065586535 0.084904267 9.31E-07 6.030913918 -0.327106777 REDIFYT(ph)SK ddPTM_A459_MK2206_30min_R2 2 REDIFYTSK 9 1 P52895;B4DK69;H0Y804;S4R3P0;P52895-2;P17516;Q04828;A6NHU4;A0A0A0MSS8;P42330;S4R3Z2;S4R3D5 P52895;Q04828;A0A0A0MSS8 AKR1C2;AKR1C1;AKR1C4;AKR1C3 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C3 1 REDIFYT(0.74)S(0.26)K;REDIFYT(0.889)S(0.111)K 112.02 0.012398 23259800 126877 93503 93247 97080 87286 62912 107292 108788 62749 101623 TRUE FALSE 136590.8007 88859.77699 96355.80844 89148.25346 83858.71306 65306.16024 93204.43152 123006.9651 68206.7946 98307.04983 1.389430371 0.903900352 0.980151562 0.906834796 0.853028478 0.664308006 0.948095093 1.251252737 0.693813869 1 16.58500726 -4.760792131 24.90205216 0.912744511 1.389430946 0.460223323 0.15534645 13.98520821 537632.8385 0.038902379 0.225238167 1.73E-05 4.760792131 0.476686434 REDIFYTS(ph)K ddPTM_A459_MK2206_30min_R1 2 REDIFYTSK 9 1 P52895;B4DK69;H0Y804;S4R3P0;P52895-2;P17516;Q04828;A6NHU4;A0A0A0MSS8;P42330;S4R3Z2;S4R3D5 P52895;Q04828;A0A0A0MSS8 AKR1C2;AKR1C1;AKR1C4;AKR1C3 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C3 1 REDIFYT(0.097)S(0.903)K;REDIFYT(0.043)S(0.957)K 122.55 0.0030339 21698000 5755 7214.1 6308.2 4471.1 4413.6 4748.4 5987.2 4546 6695.5 6788 TRUE FALSE 5265.507029 6744.460779 5880.01696 4815.464897 4237.796966 5017.250305 5587.804812 4506.254801 7391.521185 7628.948687 0.690200871 0.884061626 0.770750624 0.631209501 0.555488985 0.657659464 0.732447555 0.590678347 0.968878084 1 12.89726854 -8.278308489 21.88304441 0.984439799 0.692303644 0.638452154 0.088884176 127.5418315 165442.6183 0.092875838 0.024391699 5.27E-09 8.278308489 -0.292136155 REDIFYTS(ph)K ddPTM_A459_MK2206_30min_R2 2 REDIFYTSK 9 1 P52895;B4DK69;H0Y804;S4R3P0;P52895-2;P17516;Q04828;A6NHU4;A0A0A0MSS8;P42330;S4R3Z2;S4R3D5 P52895;Q04828;A0A0A0MSS8 AKR1C2;AKR1C1;AKR1C4;AKR1C3 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C3 1 REDIFYT(0.114)S(0.886)K;REDIFYT(0.19)S(0.81)K 116.03 0.0040968 17988000 118979 81242 82992 82298 76459 56168 121802 86929 51716 89051 TRUE FALSE 128088.1237 77207.64042 85758.91186 75573.99014 73456.83548 58305.5126 105809.2511 98290.91877 56214.1642 86145.27316 1.486885107 0.896249296 0.995515003 0.877285397 0.852708835 0.676827764 1.228265315 1.140990273 0.652550768 1 16.39448402 -4.759386722 24.9898709 0.929149052 1.486885821 0.492133795 0.171335798 47.78917337 581658.2628 0.043199087 0.275600988 1.74E-05 4.759386722 0.557736769 REDIFYTSK ddPTM_A459_MK2206_30min_R1 1 REDIFYTSK 9 1 P52895;B4DK69;H0Y804;S4R3P0;P52895-2;P17516;Q04828;A6NHU4;A0A0A0MSS8;P42330;S4R3Z2;S4R3D5 P52895;Q04828;A0A0A0MSS8 AKR1C2;AKR1C1;AKR1C4;AKR1C3 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C3 0 157.97 0.001172 166500000 9882.8 10329 10043 9699.1 11299 9892.2 10808 10202 8752.1 7988.3 FALSE TRUE 9042.215963 9656.580223 9361.309141 10446.12636 10848.9369 10452.28782 10087.01804 10112.80499 9661.912115 8977.950913 1.007158098 1.075588441 1.042699969 1.163531241 1.208397886 1.164217528 1.123532323 1.126404576 1.076182328 1 13.13217049 -5.750245188 24.74717376 1.133722914 1.045192756 0.296083391 0.05578683 219.6614733 485604.1183 0.015107194 0.025852796 1.78E-06 5.750245188 -0.088530158 REDIFYTSK ddPTM_A459_MK2206_30min_R2 4 REDIFYTSK 9 1 P52895;B4DK69;H0Y804;S4R3P0;P52895-2;P17516;Q04828;A6NHU4;A0A0A0MSS8;P42330;S4R3Z2;S4R3D5 P52895;Q04828;A0A0A0MSS8 AKR1C2;AKR1C1;AKR1C4;AKR1C3 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C3 0 ;;; 206.49 0.0012523 336514000 1284940 1580890 1675250 1552970 1513520 1496980 1611750 1282040 1471910 1388490 FALSE TRUE 1383315.994 1502385.301 1731101.999 1426087.383 1454091.6 1553948.623 1400125.289 1449607.03 1599934.071 1343183.685 1.029878497 1.118525573 1.288805111 1.061721788 1.082570922 1.156914456 1.042393013 1.07923216 1.191150614 1 20.35722518 REDLFIVS(ph)K ddPTM_A459_MK2206_30min_R1 3 REDLFIVSK 9 1 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 REDLFIVS(1)K;REDLFIVS(1)K;REDLFIVS(1)K 87.719 0.016504 36988800 10436.5 11277.5 9998.8 8979.6 10130.3 10235 10861.4 9133.5 10528.8 9396.9 TRUE FALSE 9548.820871 10543.3327 9320.109314 9671.210348 9726.7887 10814.49686 10136.85582 9053.646772 11623.30644 10561.05891 0.904153736 0.998321549 0.882497616 0.915742486 0.92100506 1.023997399 0.95983328 0.857266951 1.100581536 1 13.36646687 -6.723018875 24.99560799 0.977633654 0.925651231 0.193307012 0.063479253 332.4020315 216253.1479 0.020464384 0.020464027 1.89E-07 6.723018875 -0.051982423 REDLFIVS(ph)K ddPTM_A459_MK2206_30min_R2 3 REDLFIVSK 9 1 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 REDLFIVS(1)K;REDLFIVS(1)K;REDLFIVS(1)K 85.672 0.017896 16095500 93490 107758 100867 94937 85346 77069 105530 80445 78189 95122 TRUE FALSE 100647.6663 102406.8944 104229.8554 87180.34341 81994.88721 80001.9148 91673.78424 90959.43771 84989.73789 92018.17693 1.093780269 1.112898536 1.132709416 0.947425241 0.89107272 0.869414256 0.996257341 0.988494238 0.923619014 1 16.48963125 -5.766685794 24.87984874 0.941420265 1.113106335 0.771789176 0.041815257 55.72493238 264263.5282 0.012577175 0.019306171 1.71E-06 5.766685794 0.17168607 REDLFIVSK ddPTM_A459_MK2206_30min_R1 2 REDLFIVSK 9 1 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 157.97 0.001172 190753000 24945 27521 27286 24709 26258 22693.9 25996 23709.9 19346.5 18959.3 FALSE TRUE 22823.29676 25729.3779 25433.90234 26612.09146 25212.08826 23978.80901 24261.85427 23502.60684 21357.63791 21308.12122 1.07110789 1.207491624 1.193624819 1.248917781 1.183214982 1.125336615 1.138620061 1.102988227 1.002323841 1 14.37911577 -7.957379811 1.063913886 0.990538786 1.181984911 0.67855481 0.045516777 0.296081208 0.613199812 0.042445348 0.015563422 1.10E-08 7.957379811 0.191446125 REDLFIVSK ddPTM_A459_MK2206_30min_R2 1 REDLFIVSK 9 1 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 146.71 0.0023221 45138000 142380 168450 157940 163920 160540 151750 176480 136480 146280 149150 FALSE TRUE 153280.7223 160085.0179 163205.6408 150527.2116 154236.393 157524.9526 153307.964 154318.4046 159003.17 144283.2477 1.062359801 1.109519092 1.13114754 1.043275737 1.068983374 1.091775761 1.062548608 1.069551781 1.102021007 1 17.13854428 -14.52287875 0.299305783 0.324524322 1.086527891 0.482332827 0.025295017 241.9651251 2.239939004 102.5906978 0.026321141 3.00E-15 14.52287875 0.762003569 REDPSFER ddPTM_A459_MK2206_30min_R1 1 REDPSFER 8 1 Q9NWH9;Q9NWH9-3;H7C3F4;H0YMM0 Q9NWH9 SLTM SAFB-like transcription modulator 0 101.46 0.023021 2678400 825.53 831.55 861.76 726.94 929.23 1029.1 950.52 715.72 843.41 711.1 FALSE TRUE 755.3143385 777.4159439 803.2661322 782.9290448 892.2168014 1087.366753 887.1125451 709.4625355 931.0854877 799.1964365 0.945092225 0.97274701 1.005092235 0.979645315 1.116392367 1.360575076 1.110005631 0.887719843 1.165027076 1 9.64240634 -6.259767042 17.52967191 1.113873126 0.977540358 0.239828985 0.113776832 3.811219839 39923.43572 0.036865399 0.044958124 5.50E-07 6.259767042 -0.136332768 REDPSFER ddPTM_A459_MK2206_30min_R2 1 REDPSFER 8 1 Q9NWH9;Q9NWH9-3;H7C3F4;H0YMM0 Q9NWH9 SLTM SAFB-like transcription modulator 0 112.11 0.015307 3182500 7188.3 6340.6 6214.4 7219.5 5859.4 8440.3 7457.2 7497.4 7793 5670 FALSE TRUE 7738.641775 6025.735024 6421.584994 6629.643756 5629.330515 8761.501531 6478.060682 8477.335922 8470.821053 5484.988364 1.410876607 1.098586656 1.170756357 1.208688755 1.026315854 1.597360094 1.181052767 1.545552216 1.544364453 1 12.42127284 -6.753466761 24.99999678 1.395724607 1.179094717 0.191728782 0.192969488 262.6047855 823457.3293 0.060893574 0.059846946 1.76E-07 6.753466761 -0.21662989 REDS(ph)FESLDSLGSR ddPTM_A459_MK2206_30min_R2 2 REDSFESLDSLGSR 14 1 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 REDS(1)FESLDSLGSR;REDS(1)FESLDSLGSR 117.78 0.0012599 4441300 10394.9 15467.4 11360.7 15787.2 11296.1 13610.7 15323.1 11669.1 12814.3 10926.6 TRUE FALSE 11190.74154 14699.31141 11739.46007 14497.33526 10852.55836 14128.66473 13311.15856 13194.29144 13928.86465 10570.06594 1.058720126 1.390654656 1.110632624 1.371546341 1.026725701 1.336667606 1.259325972 1.248269549 1.317765162 1 13.36769676 -10.62385222 4.953231 0.999991602 1.238374872 0.24854657 0.122806428 1.03E-05 1.87E-06 0.107473755 0.026065296 2.38E-11 10.62385222 0.23838327 REDS(ph)ITPER ddPTM_A459_MK2206_30min_R2 1 REDSITPER 9 1 Q8IWB6-3;Q8IWB6-2;Q8IWB6 Q8IWB6-3 TEX14 Inactive serine/threonine-protein kinase TEX14 1 REDS(0.5)IT(0.5)PER 71.379 0.036227 8432900 1476.1 1265.3 3510.8 1741.2 1603.5 1802.3 1026.4 1124.5 1983.9 3023.5 TRUE FALSE 1589.111351 1202.467042 3627.84832 1598.93839 1540.538533 1870.887789 891.6324471 1271.476011 2156.456036 2924.843443 0.543315012 0.411121848 1.240356413 0.546674864 0.526708032 0.639653994 0.304847922 0.434715921 0.737289389 1 11.51414369 -8.537363179 16.7351689 1.000000017 0.58698535 0.226076778 0.238861592 35.5507255 41077.90446 0.238514421 0.061584454 2.90E-09 8.537363179 -0.413014667 REDS(ph)PGPEVQPMDK ddPTM_A459_MK2206_30min_R1 2 REDSPGPEVQPMDK 14 1 O75382-3;O75382-2;O75382;E9PMW5;E9PMK8 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 REDS(1)PGPEVQPMDK;REDS(1)PGPEVQPMDK 213.71 3.19E-06 34253000 5634.7 5643.6 5547.5 5146.3 5985.5 4712.1 5479.6 5388 4608 4146.1 TRUE FALSE 5155.439176 5276.200614 5170.951156 5542.668918 5747.08486 4978.89503 5114.065882 5340.893284 5087.01809 4659.750169 1.106376734 1.132292596 1.109705664 1.189477701 1.233346135 1.068489693 1.097497869 1.146175887 1.091693311 1 12.18603689 -9.128342672 0.596094969 0.994969346 1.142776939 0.459957912 0.044761736 2.094163228 1.192267004 0.071556322 0.020496875 7.44E-10 9.128342672 0.147807593 REDS(ph)PGPEVQPMDK ddPTM_A459_MK2206_30min_R2 4 REDSPGPEVQPMDK 14 1 O75382-3;O75382-2;O75382;E9PMW5;E9PMK8 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 REDS(1)PGPEVQPMDK;REDS(1)PGPEVQPMDK;REDS(1)PGPEVQPMDK;REDS(1)PGPEVQPMDK 213.71 3.19E-06 124661000 457030 562463 488969 562962 508042 451437 564899 474650 453275 507330 TRUE FALSE 492020.5682 534531.9053 505270.9824 516966.2038 488093.7184 468616.7514 490727.0827 536688.3847 492700.0402 490775.8636 1.002536198 1.089156874 1.029535109 1.053365176 0.994534888 0.954848814 0.999900604 1.093550895 1.003920683 1 18.90470477 -6.254142148 24.56005153 1.009428398 1.045890862 0.173143575 0.038160584 854.2005895 2874953.539 0.012029458 0.015241862 5.57E-07 6.254142148 0.036462464 REDS(ph)YHVR ddPTM_A459_MK2206_30min_R1 1 REDSYHVR 8 1 B1AVT0;P49760-2;P49760-3;P49760 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 REDS(1)YHVR 83.045 0.020458 3967600 1359.6 1315.6 1398.8 1449.1 1189.9 1046.6 1496.1 1222.8 272.49 957.71 TRUE FALSE 1243.95888 1229.954201 1303.853353 1560.709933 1142.503763 1105.857588 1396.297899 1212.109189 300.8163106 1076.358345 1.155710722 1.142699554 1.211356199 1.449991018 1.061452971 1.027406525 1.297242601 1.126120491 0.279475987 1 10.07194275 -8.12335735 7.391818302 0.644340222 1.190995783 0.552853607 0.196468116 0.175578514 9.711048856 0.12618399 0.047214983 7.53E-09 8.12335735 0.546655561 REDS(ph)YHVR ddPTM_A459_MK2206_30min_R2 3 REDSYHVR 8 1 B1AVT0;P49760-2;P49760-3;P49760 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 REDS(1)YHVR;REDS(1)YHVR;REDS(1)YHVR 86.463 0.017371 33652700 40904.4 40647.2 40231.2 48324.1 49269.9 48378.6 49054 43672 45893.4 38785.8 TRUE FALSE 44036.07231 38628.71915 41572.48813 44375.86645 47335.31616 50219.68152 42613.15088 49380.08035 49885.12498 37520.22252 1.173662344 1.029543978 1.108002174 1.182718637 1.261594761 1.338469714 1.135738224 1.316092417 1.329553015 1 15.19538076 -5.920632922 2.857929372 1.245998925 1.094928129 0.225305059 0.10200714 0.323334892 5.344163933 0.029136287 0.045950854 1.20E-06 5.920632922 -0.151070796 REEAAVDAQQQK ddPTM_A459_MK2206_30min_R2 2 REEAAVDAQQQK 12 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 140.78 0.0014158 3079400 25555 30263 25059 26500 27213 26706 25384 20717 25622 25165 FALSE TRUE 27511.51045 28760.18343 25894.45455 24334.86523 26144.48089 27722.31554 22051.05031 23424.78303 27850.55525 24343.86811 1.130120748 1.18141387 1.063695155 0.999630179 1.073965763 1.138780222 0.905815387 0.962245726 1.144048067 1 14.5712708 -5.398746881 4.373742212 1.031406444 1.154725922 0.32084861 0.070753577 0.264066617 8.077433007 0.019400714 0.042479177 3.99E-06 5.398746881 0.123319478 REEDEENDNDNES(ph)DHDEADS ddPTM_A459_MK2206_30min_R1 1 REEDEENDNDNESDHDEADS 20 1 H0YBP8;Q9NRG0 H0YBP8 CHRAC1 Chromatin accessibility complex protein 1 1 REEDEENDNDNES(0.953)DHDEADS(0.047) 54.235 0.024771 34406000 299.06 141.21 372.41 214.29 259.16 284.76 289.87 286.81 258.36 225.82 TRUE FALSE 273.6233766 132.0172033 347.1318468 230.7946529 248.8371084 300.8828651 270.5333012 284.3024504 285.2174466 253.7962865 1.078122066 0.520169957 1.367757786 0.9093697 0.980460006 1.185529029 1.065946649 1.12019941 1.123804649 1 7.98752715 -5.261587903 24.9999999 1.090025226 0.799146037 0.318741702 0.17242057 13.94065833 2347040.32 0.041520082 0.096139174 5.48E-06 5.261587903 -0.290879189 REEDEPEER ddPTM_A459_MK2206_30min_R2 1 REEDEPEER 9 1 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 0 102.52 0.021723 2573700 3366.9 5034.2 5128.2 5166.4 4524.8 4862.5 4388.8 3570.2 3812.8 5956.2 FALSE TRUE 3624.672453 4784.208948 5299.171628 4744.288594 4347.133617 5047.545845 3812.545288 4036.837398 4144.430452 5761.849682 0.629081398 0.830325193 0.919699736 0.823396801 0.754468418 0.876028728 0.661687739 0.700614841 0.719288194 1 12.49231631 -7.25147654 24.90917483 0.745448927 0.81031322 0.002572964 0.112838771 1926.04888 4815533.258 0.042258751 0.032354854 5.60E-08 7.25147654 0.064864294 REEDEPEERS(ph)GDETPGSEVPGDK ddPTM_A459_MK2206_30min_R1 2 REEDEPEERSGDETPGSEVPGDK 23 2 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 REEDEPEERS(0.951)GDET(0.01)PGS(0.039)EVPGDK;REEDEPEERS(0.59)GDET(0.205)PGS(0.205)EVPGDK 86.832 0.00027791 15965100 1958.5 2148.61 2129.62 1871.05 2164.88 1412.8 1720.96 1826.73 1508.37 1353.36 TRUE FALSE 1791.919291 2008.735098 1985.067328 2015.158595 2078.648245 1492.791515 1606.157898 1810.759092 1665.170459 1521.024454 1.178100251 1.320646156 1.305085742 1.324869294 1.366610668 0.981438208 1.055971121 1.190486509 1.094769025 1 10.57082763 -6.756820762 24.99999403 1.075903258 1.302029877 0.736405161 0.069981662 65.06403111 352183.3663 0.024317719 0.023546659 1.75E-07 6.756820762 0.226126619 REEDEPEERS(ph)GDETPGSEVPGDK ddPTM_A459_MK2206_30min_R2 2 REEDEPEERSGDETPGSEVPGDK 23 2 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 REEDEPEERS(0.799)GDET(0.1)PGS(0.1)EVPGDK;REEDEPEERS(0.962)GDET(0.016)PGS(0.022)EVPGDK 71.946 0.0020843 162452000 80879 109850 99380 112511 94929 73843 104046 82439 89033 79604 TRUE FALSE 87071.15843 104395.0087 102693.2796 103318.4914 91201.61048 76653.14711 90384.63522 93214.06036 96776.92941 77006.528 1.130698406 1.355664402 1.333565897 1.341684843 1.184336093 0.995411027 1.173726924 1.21046959 1.256736694 1 16.23269313 -6.416695519 5.298656709 1.138107688 1.296874983 0.381128519 0.097319551 0.255698922 10.51775957 0.031274818 0.035367755 3.83E-07 6.416695519 0.158767294 REEDEPEERSGDETPGS(ph)EVPGDK ddPTM_A459_MK2206_30min_R1 2 REEDEPEERSGDETPGSEVPGDK 23 2 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 REEDEPEERS(0.272)GDET(0.291)PGS(0.437)EVPGDK;REEDEPEERS(0.349)GDET(0.034)PGS(0.618)EVPGDK 84.324 0.00033857 78537700 8021.8 8566.8 7797.3 7283 8424.2 7259.1 7323.9 7656.7 7278.5 5165.4 TRUE FALSE 7339.503786 8009.099763 7268.041001 7843.937922 8088.646275 7670.103969 6835.335994 7589.758279 8035.126121 5805.328749 1.264270139 1.379611751 1.251960279 1.35116171 1.393314078 1.32121785 1.177424447 1.307377861 1.384094936 1 12.50316205 -11.12986944 2.95337882 0.978334788 1.313922563 0.679618731 0.064777679 14151178.82 14939191.64 2378141.168 0.017156147 7.42E-12 11.12986944 0.335587775 REEEEDFIR ddPTM_A459_MK2206_30min_R2 1 REEEEDFIR 9 1 Q96A65 Q96A65 EXOC4 Exocyst complex component 4 0 125.97 0.0066524 2876700 20461 22065 18763 26079 24201 20048 26829 16604 15128 25166 FALSE TRUE 22027.50989 20969.28419 19388.54906 23948.26228 23250.74714 20810.94069 23306.32007 18774.19981 16443.80609 24344.83548 0.904812436 0.861344255 0.79641323 0.983710171 0.955058709 0.854840063 0.957341449 0.771177929 0.675453572 1 14.57132813 -10.42824432 4.523649267 1.000001367 0.866480625 0.171104153 0.090531279 33162838.88 321.886436 515.4346184 0.022985214 3.73E-11 10.42824432 -0.133520742 REEEEQQEGGFAS(ph)PR ddPTM_A459_MK2206_30min_R1 1 REEEEQQEGGFASPR 15 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2;A0A087WWG9 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 REEEEQQEGGFAS(1)PR 219.03 2.33E-39 0 395.68 527.93 756.46 469.42 539.11 587.91 624.11 518.14 445.28 393.76 TRUE FALSE 362.0253382 493.561661 705.1136028 505.5748097 517.6361071 621.1969561 582.4767607 513.6099566 491.5684495 442.5419615 0.818058782 1.115287823 1.593325976 1.142433608 1.169688193 1.403701818 1.316206849 1.16059041 1.110783818 1 8.789670447 -8.391708257 1.985565 1.006941216 1.233280474 0.112094869 0.191638372 0.688042929 5.553540033 0.187649946 0.053356568 4.06E-09 8.391708257 0.226339258 REEEEQQEGGFAS(ph)PR ddPTM_A459_MK2206_30min_R2 1 REEEEQQEGGFASPR 15 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2;A0A087WWG9 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 REEEEQQEGGFAS(1)PR 65.287 0.034121 8074500 10194 14336 11713 16938 13029 18904 11842 11209 16080 11453 TRUE FALSE 10974.46048 13624.09509 12103.50557 15554.11122 12517.41599 19623.40497 10287.13118 12674.05479 17478.60933 11079.28955 0.990538286 1.229690318 1.092444197 1.403890669 1.129803129 1.771178999 0.928500977 1.14394111 1.577592973 1 13.43557775 -5.73917114 24.84311163 1.284922843 1.116770781 0.093422211 0.248533104 578.9292517 645865.001 0.065452287 0.113250746 1.82E-06 5.73917114 -0.168152062 REEGDPS(ph)PHSGGVCKPK ddPTM_A459_MK2206_30min_R2 1 REEGDPSPHSGGVCKPK 17 2 O75376-2;O75376;E7EVK1;J3KRE4 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 REEGDPS(0.998)PHS(0.002)GGVCKPK 52.966 0.034874 3324900 40538 44390 40433 42743 44817 36012 44862 32880 36222 48552 TRUE FALSE 43641.62045 42185.65715 41781.01604 39250.76017 43057.25939 37382.46189 38971.56551 37177.52889 39372.52409 46967.75222 0.92918265 0.898183438 0.889568141 0.835695947 0.916740899 0.795917627 0.829751557 0.791554357 0.838288447 1 15.51938293 -5.240918467 0.876006592 0.844243988 0.943141542 0.10303125 0.059256642 2.260439557 2.1382481 0.02181377 0.188042359 5.74E-06 5.240918467 0.098897554 REEGPPPPSPDGAS(ph)SDAEPEPPSGR ddPTM_A459_MK2206_30min_R1 2 REEGPPPPSPDGASSDAEPEPPSGR 25 1 C9JR83;Q9NTJ3-2;Q9NTJ3;C9JWF0;C9IYK2;C9JJ64;E9PD53;F8WCB7 C9JR83 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 REEGPPPPSPDGAS(0.621)S(0.379)DAEPEPPSGR;REEGPPPPSPDGAS(0.64)S(0.36)DAEPEPPSGR 196.75 3.28E-31 15902700 3022.9 2473.5 2699.3 1949.38 2394.23 2820.4 2709.5 2118.77 2560.4 3465.3 TRUE FALSE 2765.786481 2312.4747 2516.079037 2099.521585 2298.862749 2980.088611 2528.754199 2100.245817 2826.562742 3894.607526 0.710157946 0.593763219 0.646041744 0.539084252 0.590268142 0.765183293 0.649296285 0.53927021 0.72576318 1 11.92726223 -8.581711967 7.729674018 0.999999007 0.629541985 0.736555715 0.066870213 0.698018917 91.63943801 0.065733021 0.016994233 2.62E-09 8.581711967 -0.370457022 REELFIVSK ddPTM_A459_MK2206_30min_R1 2 REELFIVSK 9 1 P15121;E9PCX2;E9PEF9 P15121 AKR1B1 Aldose reductase 0 ; 138.76 0.0032992 22019000 10672.8 12164.6 10766.4 11040.7 10023.9 10294.5 11204.9 10062 7842.2 8740.1 FALSE TRUE 9765.022315 11372.68233 10035.60676 11891.05663 9624.626837 10877.36569 10457.44157 9974.028995 8657.424754 9822.889572 0.994108937 1.157773611 1.021655256 1.210545689 0.979816251 1.107348873 1.064599321 1.015386452 0.881352141 1 13.26193177 -7.956810897 3.168563875 0.940554027 1.080297716 0.357399118 0.072337769 0.245426679 4.917439989 0.046210263 0.018058278 1.10E-08 7.956810897 0.139743689 REELFIVSK ddPTM_A459_MK2206_30min_R2 2 REELFIVSK 9 1 P15121;E9PCX2;E9PEF9 P15121 AKR1B1 Aldose reductase 0 ; 121.36 0.0085057 9118900 78792 95935 84187 119448 106765 90587 118577 104645 83743 98543 FALSE TRUE 84824.3761 91171.0074 86993.75256 109688.7163 102572.8696 94034.35176 103007.6975 118322.4608 91026.81477 95327.54998 0.889820163 0.956397258 0.912577241 1.150650744 1.076004467 0.986434161 1.080565875 1.241219992 0.954884656 1 16.5406056 -5.746412636 24.99956973 1.07722934 0.923278056 0.424547503 0.079877071 224.0832677 372797.9964 0.021398977 0.036882283 1.79E-06 5.746412636 -0.153951284 REELITNWEQIR ddPTM_A459_MK2206_30min_R1 1 REELITNWEQIR 12 1 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 137.09 0.0018303 3383200 937.57 1113.5 1338.7 914.05 927.24 783.98 979.29 795.96 951.59 896.69 FALSE TRUE 857.8247481 1041.010948 1247.832774 984.4502894 890.3060673 828.3682701 913.9633509 789.0010056 1050.511186 1007.778727 0.851203469 1.032975712 1.238201145 0.976851627 0.883434075 0.821974356 0.906908755 0.782910955 1.042402621 1 9.976963193 -6.001703856 24.99938666 0.894771445 1.051264116 0.220260574 0.112365577 86.99800965 1276508.01 0.031940075 0.046603057 9.96E-07 6.001703856 0.156492671 REELITNWEQIR ddPTM_A459_MK2206_30min_R2 2 REELITNWEQIR 12 1 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 ; 100.73 0.017836 5135700 8487.5 9980.8 8576.2 9401.2 11624.2 9707.4 11845.7 8986.3 10866.3 8375.4 FALSE TRUE 9137.309526 9485.167985 8862.126228 8633.091887 11167.7755 10076.82191 10290.34536 10160.84026 11811.43113 8102.111384 1.127768935 1.170703232 1.093804542 1.065536066 1.378378422 1.243727892 1.270081942 1.254097825 1.457821372 1 12.9840822 -6.250799395 24.88147779 1.279011502 1.116996146 0.301844748 0.11306018 781.4530374 1827417.551 0.031568178 0.04031708 5.61E-07 6.250799395 -0.162015356 REEPEALY(ph)AAVNK ddPTM_A459_MK2206_30min_R2 1 REEPEALYAAVNK 13 1 A0A087WVF7;Q9NZM3-2;Q9NZM3;Q9NZM3-4;Q9NZM3-3 A0A087WVF7 ITSN2 Intersectin-2 1 REEPEALY(1)AAVNK 124.47 0.0013438 0 20534 21464 22194 21415 18918 22785 23321 17037 17279 18971 TRUE FALSE 22106.09883 20398.12897 22933.93688 19665.326 18175.18426 23652.09914 20258.92469 19263.7944 18781.89619 18351.97782 1.204562203 1.111494857 1.249671131 1.071564394 0.990366512 1.288803821 1.10390961 1.049684921 1.023426269 1 14.16364793 -7.73988231 3.173471399 1.021342224 1.147271503 0.329827223 0.081650263 0.319058943 6.571841436 0.04820086 0.023070226 1.82E-08 7.73988231 0.125929279 REESPMDVDQPS(ph)PSAQDTQSIASDGTPQGEK ddPTM_A459_MK2206_30min_R1 2 REESPMDVDQPSPSAQDTQSIASDGTPQGEK 31 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 REESPMDVDQPS(0.949)PS(0.05)AQDTQSIASDGTPQGEK;REESPMDVDQPS(0.936)PS(0.064)AQDTQSIASDGTPQGEK 130.62 2.16E-18 52021900 6973.5 7045.8 7565 5613.71 6676.2 5812.9 6999.4 5866.7 7273.3 6712.9 TRUE FALSE 6380.367206 6587.117139 7051.508877 6046.078917 6410.272817 6142.021375 6532.482797 5815.40806 8029.385563 7544.544732 0.845692806 0.873096704 0.934650019 0.801384196 0.849656678 0.814100995 0.865855135 0.770809673 1.064263763 1 12.88121813 -8.26982423 24.99984649 1.032131909 0.846816078 0.740402157 0.044444934 339.643857 1012652.243 0.040011293 0.011028692 5.37E-09 8.26982423 -0.185315831 REESPMDVDQPS(ph)PSAQDTQSIASDGTPQGEK ddPTM_A459_MK2206_30min_R2 4 REESPMDVDQPSPSAQDTQSIASDGTPQGEK 31 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 REESPMDVDQPS(0.491)PS(0.491)AQDT(0.017)QSIASDGTPQGEK;REESPMDVDQPS(0.499)PS(0.499)AQDT(0.002)QSIASDGTPQGEK;REESPMDVDQPS(0.79)PS(0.209)AQDT(0.001)QSIASDGTPQGEK;REESPMDVDQPS(0.931)PS(0.069)AQDTQSIASDGTPQGEK 126.94 2.40E-18 103028200 276634 319656 290912 326790 306188 300120 345493 250423 247734 300696 TRUE FALSE 297813.3117 303782.3479 300610.8609 300090.2117 294165.5206 311541.2769 300129.3541 283154.1459 269281.4555 290884.3141 1.023820458 1.044340767 1.033437852 1.031647968 1.011280108 1.071014358 1.031782532 0.973425283 0.925733848 1 18.15008598 -7.797464505 4.308085191 0.959414301 1.036241885 0.671834293 0.022119685 0.109887408 4.45517529 0.011932595 0.005694283 1.59E-08 7.797464505 0.076827585 REESPMDVDQPS(ph)PSAQDTQSIASDGTPQGEKEK ddPTM_A459_MK2206_30min_R1 1 REESPMDVDQPSPSAQDTQSIASDGTPQGEKEK 33 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 REESPMDVDQPS(0.264)PS(0.264)AQDT(0.264)QS(0.208)IASDGTPQGEKEK 59.038 0.00031026 7746900 1571.4 1304.5 1419.4 1615.9 1642.1 1270.6 1230.6 1748.4 1196.7 680.83 TRUE FALSE 1437.744178 1219.576813 1323.055083 1740.356898 1576.69168 1342.540274 1148.508919 1733.113923 1321.101247 765.1763604 1.878970983 1.593850615 1.729085151 2.274451993 2.060559841 1.754550119 1.50097282 2.264986234 1.726531707 1 9.579648493 -8.55371593 22.13557837 0.999999991 1.877414743 0.536275063 0.245073317 1975.684134 1418186.098 0.245533357 0.06339644 2.79E-09 8.55371593 0.877414752 REESPMDVDQPS(ph)PSAQDTQSIASDGTPQGEKEK ddPTM_A459_MK2206_30min_R2 1 REESPMDVDQPSPSAQDTQSIASDGTPQGEKEK 33 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 REESPMDVDQPS(0.475)PS(0.475)AQDT(0.044)QS(0.006)IASDGTPQGEKEK 65.73 7.15E-05 7287200 15884 37787 27885 28816 42258 31687 32469 19888 34285 26906 TRUE FALSE 17100.09125 35910.55253 28814.67198 26461.64062 40598.73859 32892.87099 28205.7813 22487.42989 37267.04733 26028.05942 0.656986792 1.379686128 1.107061864 1.016658222 1.559806589 1.263746576 1.083668238 0.863968747 1.43180276 1 14.66778013 -4.748292731 24.98686464 1.187940854 0.656985507 0.373998137 0.206711692 718.9331395 1366342.466 0.051366223 0.949844876 1.79E-05 4.748292731 -0.530955347 REESPMDVDQPSPS(ph)AQDTQSIASDGTPQGEK ddPTM_A459_MK2206_30min_R1 2 REESPMDVDQPSPSAQDTQSIASDGTPQGEK 31 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 REESPMDVDQPS(0.247)PS(0.746)AQDT(0.007)QSIASDGTPQGEK;REESPMDVDQPS(0.154)PS(0.846)AQDTQSIASDGTPQGEK 152.64 1.38E-20 45943300 4294.3 4164.36 4220.16 3461.55 4256.9 3629.23 4148 3688.53 3883.04 4186.2 TRUE FALSE 3929.047235 3893.259407 3933.707297 3728.159181 4087.338659 3834.713866 3871.294488 3656.281571 4286.695904 4704.81806 0.835111408 0.827504774 0.836101895 0.79241304 0.868755945 0.815061033 0.822836173 0.777135593 0.911128942 1 12.19992322 -8.521289372 4.331575012 0.999754626 0.823350778 0.852036888 0.0237351 0.056551992 3.388080968 0.022182983 0.005796227 3.01E-09 8.521289372 -0.176403848 REESPMDVDQPSPS(ph)AQDTQSIASDGTPQGEKEK ddPTM_A459_MK2206_30min_R1 1 REESPMDVDQPSPSAQDTQSIASDGTPQGEKEK 33 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 REESPMDVDQPS(0.049)PS(0.889)AQDT(0.049)QS(0.012)IASDGTPQGEKEK 105.44 3.95E-14 8414100 2004.5 1605.1 1349.5 1099.9 1346.5 929.18 919.03 1713.1 845.42 557.24 TRUE FALSE 1834.006749 1500.607698 1257.8997 1184.614489 1292.866054 981.7893686 857.7231856 1698.122547 933.3044344 626.2750981 2.928436328 2.39608393 2.008541779 1.891524175 2.064374039 1.567664708 1.369562973 2.711464263 1.490246758 1 9.290652706 -1.522878745 0.494481618 1.706400994 39.47603787 0.472807679 0.420407588 99.66445122 1.075111025 0.231107673 3899.208794 0.03 1.522878745 37.76963688 REGGDGEEQDVGDAGR ddPTM_A459_MK2206_30min_R1 1 REGGDGEEQDVGDAGR 16 1 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 0 273.84 1.06E-50 6254300 1760.7 1609.2 2051.1 1434.7 1634.2 1656.1 2221.5 1701.2 1210.6 1300 FALSE TRUE 1610.943219 1504.440788 1911.877047 1545.200843 1569.106354 1749.866951 2073.307788 1686.326588 1336.446202 1461.053814 1.102589927 1.029695671 1.30856032 1.05759338 1.073955208 1.197674537 1.419049571 1.154185131 0.914713879 1 10.5127936 -8.233609467 9.163198763 0.957391664 1.170671579 0.349395837 0.114884948 0.395953277 127.846242 0.084380993 0.030922364 5.84E-09 8.233609467 0.213279915 REGGDGEEQDVGDAGR ddPTM_A459_MK2206_30min_R2 1 REGGDGEEQDVGDAGR 16 1 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 0 75.911 0.040765 4709100 10137 21058 17307 17571 17327 27032 19771 14764 16691 14779 FALSE TRUE 10913.09651 20012.29034 17884.00674 16135.39309 16646.65492 28060.7217 17175.04395 16693.70549 18142.75301 14296.76244 0.763326422 1.399777777 1.250913052 1.128604687 1.164365358 1.962732599 1.201324008 1.167656353 1.269011294 1 13.80340086 -4.75465177 24.91148703 1.297148489 0.763325469 0.280888981 0.248344644 301.571735 1106707.133 0.062594959 0.597825731 1.76E-05 4.75465177 -0.533823021 REGPGS(ph)EPDSQVDGGLSGASLGEK ddPTM_A459_MK2206_30min_R1 1 REGPGSEPDSQVDGGLSGASLGEK 24 1 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 REGPGS(0.998)EPDS(0.002)QVDGGLSGASLGEK 77.062 0.00018775 8739700 2625.1 2479.7 2085 2425 2535.9 2210.7 2296.8 2152.7 2182.4 2148.1 TRUE FALSE 2401.82146 2318.271079 1943.476009 2611.77392 2434.889733 2335.867924 2143.584663 2133.879171 2409.26829 2414.222845 0.994863198 0.96025563 0.805011026 1.08182802 1.008560472 0.967544454 0.887898425 0.883878294 0.997947764 1 11.23734314 -4.802130736 5.540109906 0.950158137 0.995683702 0.023192483 0.074297913 0.665705067 48.11866118 0.019007777 0.09394846 1.58E-05 4.802130736 0.045525565 REGPGS(ph)EPDSQVDGGLSGASLGEK ddPTM_A459_MK2206_30min_R2 2 REGPGSEPDSQVDGGLSGASLGEK 24 1 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 REGPGS(0.534)EPDS(0.466)QVDGGLSGASLGEK;REGPGS(0.998)EPDS(0.002)QVDGGLSGASLGEK 101.59 2.12E-06 16885600 63994 76718 67036 76975 71164 69252 77759 62305 61651 68001 TRUE FALSE 68893.42984 72908.29568 69270.94678 70685.89627 68369.74379 71887.43339 67549.14989 70448.47743 67013.29254 65782.13294 1.04729699 1.108329761 1.053035888 1.07454552 1.039336074 1.092810923 1.026861655 1.070936351 1.018715714 1 16.00540817 -8.485215575 0.533925005 0.997312967 1.07186768 0.455772312 0.023697537 0.836382288 0.581346461 0.024519617 0.011533418 3.27E-09 8.485215575 0.074554713 REGPVGGES(ph)DSEEMFEK ddPTM_A459_MK2206_30min_R1 3 REGPVGGESDSEEMFEK 17 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 REGPVGGES(0.836)DS(0.164)EEMFEK;REGPVGGES(0.937)DS(0.063)EEMFEK;REGPVGGES(0.97)DS(0.03)EEMFEK 216.9 1.79E-11 60500800 12079.2 11424.7 11395.9 10461.6 11149.7 9509.3 10810.4 10895.4 8394.9 8122.4 TRUE FALSE 11051.80061 10680.94995 10622.37806 11267.35424 10705.58384 10047.70835 10089.25794 10800.14267 9267.579896 9128.664233 1.210670075 1.17004522 1.163628959 1.234282909 1.172743741 1.100676736 1.105228288 1.183102192 1.015217524 1 13.15618806 -8.120703919 0.450513914 0.990962093 1.199050773 0.691096089 0.041592872 0.591736385 0.323063191 0.04926467 0.031303093 7.57E-09 8.120703919 0.20808868 REGPVGGES(ph)DSEEMFEK ddPTM_A459_MK2206_30min_R2 7 REGPVGGESDSEEMFEK 17 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 REGPVGGES(0.993)DS(0.007)EEMFEK;REGPVGGES(0.939)DS(0.061)EEMFEK;REGPVGGES(0.864)DS(0.136)EEMFEK;REGPVGGES(0.978)DS(0.022)EEMFEK;REGPVGGES(0.969)DS(0.031)EEMFEK;REGPVGGES(0.977)DS(0.023)EEMFEK;REGPVGGES(0.995)DS(0.005)EEMFEK 178.1 1.56E-07 97386300 264939.2 308383 300527 307717 330536 260934 308876 245803.3 255240.7 290381.5 TRUE FALSE 285223.1489 293069.1487 310546.4202 282575.5368 317557.4958 270864.0262 268320.2102 277930.6353 277441.0747 280906.3754 1.015367303 1.043298317 1.105515742 1.005942056 1.130474505 0.964250191 0.955194448 0.989406648 0.987663859 1 18.09972984 -6.793122031 24.9999784 0.977134113 1.058697266 0.543734469 0.036977517 148.726174 117354.9937 0.012509951 0.011033704 1.61E-07 6.793122031 0.081563153 REGT(ph)PPPPPPSR ddPTM_A459_MK2206_30min_R1 1 REGTPPPPPPSR 12 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 REGT(1)PPPPPPSR 93.716 0.024857 35391000 5952.1 5714.5 5507.4 5100 5556.4 5634.7 5707.6 5383.6 3750.3 4545.1 TRUE FALSE 5445.842639 5342.485011 5133.573032 5492.802884 5335.076822 5953.731845 5326.856418 5336.531753 4140.157106 5108.181302 1.066102066 1.045868323 1.004970797 1.07529521 1.044418063 1.165528687 1.042808801 1.044702887 0.810495333 1 12.31859402 -8.13169 6.898009241 0.906598961 1.06279606 0.541882729 0.057540354 0.173208078 8.767355363 0.037958135 0.014143226 7.38E-09 8.13169 0.156197099 RENMS(ph)KLMSEMHS(ph)FIQIQK ddPTM_A459_MK2206_30min_R2 1 RENMSKLMSEMHSFIQIQK 19 2 Q6K0P9-4;Q6K0P9-3;Q6K0P9-2;Q6K0P9 Q6K0P9-4 PYHIN1 Pyrin and HIN domain-containing protein 1 2 RENMS(0.935)KLMS(0.095)EMHS(0.97)FIQIQK 45.618 0.03266 3799300 8583 8586.9 10512 12632 11469 9159.8 11296 6760.5 9770.3 11090 TRUE FALSE 9240.121079 8160.487033 10862.46483 11599.92519 11018.66943 9508.382608 9812.821631 7644.120562 10620.10303 10728.13421 0.861298051 0.760662281 1.012521341 1.081262125 1.027081617 0.886303473 0.914681103 0.712530288 0.989930106 1 13.38911157 -10.25627562 15.12007285 1.000001899 0.91570157 0.048479288 0.111283664 0 0 0.116045275 0.028145113 5.54E-11 10.25627562 -0.084300329 REPAEQPGDGER ddPTM_A459_MK2206_30min_R1 1 REPAEQPGDGER 12 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 0 130.69 0.0028849 3147500 1289 1726.9 1321.2 1098.9 1316.1 1135.2 1780.4 1315.8 929.61 1120.5 FALSE TRUE 1179.363781 1614.478496 1231.520625 1183.537468 1263.67695 1199.474043 1661.632765 1304.296099 1026.246286 1259.315999 0.936511393 1.282028099 0.977928197 0.939825643 1.003462952 0.952480588 1.319472448 1.035717882 0.814923567 1 10.29842463 -8.0981521 7.871165757 0.91067117 1.062110199 0.161345263 0.136035171 0.535139754 38.18936979 0.092770223 0.034832284 7.98E-09 8.0981521 0.15143903 REPEDEGEDDD ddPTM_A459_MK2206_30min_R1 1 REPEDEGEDDD 11 1 P39687 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 0 145.17 0.0098931 3425100 1821.4 1908.1 1735.3 1555.7 1777 1467.3 1921.1 1761.7 1033 1854.2 FALSE TRUE 1666.480365 1783.882343 1617.512671 1675.520284 1706.218327 1550.377258 1792.946924 1746.297643 1140.384047 2083.912294 0.799688341 0.856025634 0.776190378 0.804026296 0.818757263 0.743974332 0.860375424 0.83798999 0.547232266 1 11.02507884 -5.272905695 24.00314532 0.793955758 0.827856992 0.010365168 0.107142207 2262.757801 4736778.114 0.02653873 0.056060734 5.33E-06 5.272905695 0.033901234 REPES(ph)PPASAPIPLFGADTIGQR ddPTM_A459_MK2206_30min_R1 2 REPESPPASAPIPLFGADTIGQR 23 1 Q96AY4 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 REPES(1)PPASAPIPLFGADTIGQR;REPES(0.997)PPAS(0.003)APIPLFGADTIGQR 123.88 5.35E-06 12587400 2079.12 1885.7 2124.73 1570.7 1881.77 1725.94 2053.06 1715.46 2171.5 2194.95 TRUE FALSE 1902.279926 1762.940587 1980.509247 1691.675586 1806.815116 1823.661231 1916.104113 1700.461914 2397.235196 2466.876977 0.771128817 0.714644712 0.802840703 0.685755959 0.732430167 0.739259091 0.77673274 0.68931768 0.971769252 1 11.26847005 -8.271130431 23.99268734 0.98588476 0.739599766 0.883381899 0.035878352 123.7268448 306311.6338 0.030816572 0.008390598 5.36E-09 8.271130431 -0.246284994 REPGYT(ph)PPGAGNQNPPGMYPVTGPK ddPTM_A459_MK2206_30min_R2 2 REPGYTPPGAGNQNPPGMYPVTGPK 25 1 C9JXK9;C9JUT4;A0A087WZF1;Q93052 C9JXK9 LPP Lipoma-preferred partner 1 REPGY(0.089)T(0.911)PPGAGNQNPPGMYPVTGPK;REPGY(0.134)T(0.814)PPGAGNQNPPGMY(0.052)PVTGPK 70.57 0.0013815 15910400 62527 72001 60030 64501 81121 69952 77360 52037 52898 64178 TRUE FALSE 67314.1152 68425.53504 62031.37024 59231.06197 77935.78194 72614.07238 67202.53907 58838.41457 57498.97242 62083.87712 1.084244708 1.102146615 0.999154259 0.954049018 1.255330459 1.169612398 1.082447524 0.947724551 0.926149833 1 15.92193104 -7.744322339 6.593191978 0.952158544 1.093545307 0.373653062 0.079717741 0.173475674 29.92575889 0.043621245 0.023630232 1.80E-08 7.744322339 0.141386763 REPLPSR ddPTM_A459_MK2206_30min_R1 2 REPLPSR 7 1 H3BT71;H0Y6E7;Q8IZ40;P38159;P38159-2;H3BUY5;Q96E39 H3BT71;P38159 RBMX;RCOR2;RBMXL1 "REST corepressor 2;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 0 ; 171.38 2.61E-05 13387200 10141.7 10987.3 9984.1 9407.2 9931.9 9792.4 10124.7 8223 6625.5 8125 FALSE TRUE 9279.095159 10272.02477 9306.407109 10131.74417 9536.291392 10346.83723 9449.299737 8151.107178 7314.244435 9131.586341 1.01615369 1.12488941 1.019144622 1.109527282 1.044319249 1.133082122 1.034792793 0.892627729 0.800982892 1 13.15664979 -7.71164488 3.997028443 0.882393061 1.074928195 0.637503088 0.059347381 0.117419723 3.856556632 0.029095179 0.015107439 1.94E-08 7.71164488 0.192535134 REQGGSGLGSGSS(ph)GGGGSTSGLGSGYIGR ddPTM_A459_MK2206_30min_R1 1 REQGGSGLGSGSSGGGGSTSGLGSGYIGR 29 1 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 1 REQGGSGLGSGS(0.036)S(0.964)GGGGSTSGLGSGYIGR 122.48 6.87E-14 9987100 499.75 917.3 924.35 616.83 458.91 508.36 513.87 424.4 609.58 528.82 TRUE FALSE 457.2436382 857.5836033 861.6076974 664.3383535 440.6306429 537.1429039 479.5906699 420.6895155 672.9480224 594.334214 0.769337567 1.442931575 1.449702334 1.117785815 0.741385289 0.903772476 0.806937677 0.707833245 1.132272056 1 9.215130625 -6.066411276 5.331363215 0.867127274 1.24970686 0.349790007 0.210465574 0.210293939 11.6125008 0.061508617 0.081472955 8.58E-07 6.066411276 0.382579586 REQGGSGLGSGSS(ph)GGGGSTSGLGSGYIGR ddPTM_A459_MK2206_30min_R2 1 REQGGSGLGSGSSGGGGSTSGLGSGYIGR 29 1 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 1 REQGGSGLGSGS(0.026)S(0.973)GGGGSTSGLGSGYIGR 149.45 6.42E-16 8869500 2846.9 4405.1 3170.8 3489.4 3282.7 3707.3 4203.9 4288.6 4213.3 4369.9 TRUE FALSE 3064.860853 4186.34914 3276.512889 3204.304858 3153.804704 3848.383899 3651.92288 4849.134745 4579.765218 4227.310521 0.725014365 0.990310298 0.775082141 0.758000824 0.746054658 0.910362246 0.863888012 1.147096888 1.083375635 1 12.04552438 -7.673182064 5.116485144 1.085597171 0.823090115 0.659972529 0.083355027 0.122457321 5.326125643 0.041418928 0.023021349 2.12E-08 7.673182064 -0.262507056 REREES(ph)EDELEEANGNNPIDIEVDQNK ddPTM_A459_MK2206_30min_R1 1 REREESEDELEEANGNNPIDIEVDQNK 27 2 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 REREES(1)EDELEEANGNNPIDIEVDQNK 73.322 0.0002921 2076100 140.66 203.2 277.35 0 242.63 144.68 165.59 155.24 189.69 0 TRUE FALSE 128.6961284 189.9716431 258.5242547 0 232.9655333 152.8716566 154.5437932 153.882753 209.4089543 0 0 REREES(ph)EDELEEANGNNPIDIEVDQNK ddPTM_A459_MK2206_30min_R2 2 REREESEDELEEANGNNPIDIEVDQNK 27 2 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 REREES(1)EDELEEANGNNPIDIEVDQNK;REREES(1)EDELEEANGNNPIDIEVDQNK 72.513 0.00014214 5969200 9825.2 11584.4 12190.7 10882.1 13518 11154.6 11991.1 10862.3 8912 11781.6 TRUE FALSE 10577.42487 11009.13554 12597.13185 9992.99762 12987.2154 11579.09612 10416.65417 12282.03991 9687.149651 11397.16736 0.928074892 0.965953662 1.105286205 0.876796603 1.139512564 1.01596263 0.913968694 1.077639691 0.849961166 1 13.47638768 -10.29526468 4.690455932 1.000000014 0.99160554 0 0.093145471 1.33E-08 3.62E-09 0.084464759 0.020485678 5.07E-11 10.29526468 -0.008394473 RES(ph)AASGLGGLLEEEGAGAGAAQEEVLEPGR ddPTM_A459_MK2206_30min_R2 1 RESAASGLGGLLEEEGAGAGAAQEEVLEPGR 31 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RES(0.5)AAS(0.5)GLGGLLEEEGAGAGAAQEEVLEPGR 83.165 2.66E-06 3404000 3321.1 3539.9 5566.8 4554.9 5718.9 4219.2 4734.7 2120.8 1289.5 4469 TRUE FALSE 3575.365969 3364.113713 5752.394334 4182.7501 5494.347251 4379.764613 4113.028203 2397.995842 1401.658379 4323.176896 0.827022825 0.778157775 1.330594253 0.967517684 1.270905027 1.013089383 0.951390216 0.55468372 0.324219529 1 12.07787615 -7.692393421 4.311146865 0.577543058 1.036490192 0.390543456 0.224079796 0.193583958 6.946353995 0.114216103 0.061168427 2.03E-08 7.692393421 0.458947134 RES(ph)CGSSVLTDFEGK ddPTM_A459_MK2206_30min_R1 3 RESCGSSVLTDFEGK 15 1 O15231-3;O15231-2;H7BZT5;O15231-4;O15231-7;O15231;O15231-8;O15231-6;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RES(0.529)CGS(0.069)S(0.069)VLT(0.334)DFEGK;RES(0.522)CGS(0.141)S(0.334)VLT(0.003)DFEGK;RES(0.998)CGS(0.002)SVLTDFEGK 187.56 3.62E-05 17648500 7655.8 8449.7 7528.6 6212 6516.6 6483.3 7809.8 6905.3 7753.4 7829.8 TRUE FALSE 7004.634008 7899.622994 7017.579608 6690.449316 6257.030023 6850.378843 7288.822492 6844.92769 8559.393676 8799.814736 0.795997895 0.89770333 0.797469017 0.760294338 0.711041108 0.77846853 0.828292721 0.777849068 0.97267885 1 13.10325744 -8.298358894 5.325582605 0.993110014 0.793633802 0.74173196 0.045569615 0.110829981 8.29457712 0.046121277 0.012690435 5.03E-09 8.298358894 -0.199476212 RES(ph)CGSSVLTDFEGK ddPTM_A459_MK2206_30min_R2 1 RESCGSSVLTDFEGK 15 1 O15231-3;O15231-2;H7BZT5;O15231-4;O15231-7;O15231;O15231-8;O15231-6;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RES(0.992)CGS(0.007)S(0.001)VLTDFEGK 122.5 0.0040624 0 31039 27925 33461 32027 23771 19098 31511 21825 21238 26591 TRUE FALSE 33415.3697 26538.28511 34576.57304 29410.29165 22837.6311 19824.78777 27373.56785 24677.60244 23085.24285 25723.33785 1.299029306 1.031681241 1.344171322 1.14333108 0.887817562 0.770692664 1.064153028 0.959346823 0.897443519 1 14.65079024 -6.157400218 4.564078103 0.927127978 1.210190004 0.624475752 0.105262426 0.153416242 5.248498948 0.03133436 0.041015861 6.96E-07 6.157400218 0.283062026 RES(ph)CGSSVLTDFEGKDVATK ddPTM_A459_MK2206_30min_R2 1 RESCGSSVLTDFEGKDVATK 20 2 O15231-3;O15231-2;H7BZT5;O15231-4;O15231-7;O15231;O15231-8;O15231-6;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RES(0.993)CGS(0.005)S(0.002)VLTDFEGKDVATK 54.805 0.018206 6380600 15253 29320 25692 23838 30272 21392 26479 19052 28651 20144 TRUE FALSE 16420.78141 27864.01144 26548.55846 21890.35915 29083.36918 22206.08755 23002.27549 21542.16182 31143.01219 19486.70293 0.842665969 1.429898713 1.362393554 1.123348533 1.492472548 1.139550781 1.180408793 1.105480075 1.59816734 1 14.25020239 -10.9139141 3.835357574 0.998825265 1.254609174 0.114358849 0.210918295 145012546.5 2482.24386 1505572.13 0.048019763 1.22E-11 10.9139141 0.255783909 RES(ph)EALDSPNSK ddPTM_A459_MK2206_30min_R2 1 RESEALDSPNSK 12 1 P0C7T5 P0C7T5 ATXN1L Ataxin-1-like 1 RES(0.999)EALDS(0.001)PNSK 130.95 0.0037606 6242000 34140 37160 31324 33349 28780 21946 22925 19388 16490 19987 TRUE FALSE 36753.78465 35314.68844 32368.32653 30624.28002 27649.95259 22781.17041 19914.91996 21922.07817 17924.27039 19334.82583 1.90091108 1.826480815 1.674094549 1.583892211 1.430059564 1.178245442 1.030002553 1.133813067 0.927045868 1 14.23891415 -6.326002731 0.696970698 0.975030094 1.923626292 0.976471266 0.052541857 0.106930215 0.112907666 0.033554152 0.056579766 4.72E-07 6.326002731 0.948596198 RES(ph)GAAEQVDNK ddPTM_A459_MK2206_30min_R1 2 RESGAAEQVDNK 12 1 Q9P2R3;Q9P2R3-2;Q9P2R3-4 Q9P2R3 ANKFY1 Rabankyrin-5 1 RES(1)GAAEQVDNK;RES(1)GAAEQVDNK 149.59 0.0010273 6459700 3037.2 2799.8 3490.6 2929.3 3345.7 2588.6 3185.5 2780.69 2195.23 2858.3 TRUE FALSE 2778.870191 2617.532511 3253.667797 3154.915194 3212.433684 2735.164295 2973.001107 2756.37872 2423.432014 3212.407783 0.86504279 0.814819502 1.012843953 0.98210296 1.000008063 0.851437451 0.925474382 0.858041353 0.75439738 1 11.64943932 -6.791526609 24.99627532 0.871972951 0.935234417 0.10848646 0.080953875 474.9051981 394544.9088 0.029802249 0.026286583 1.62E-07 6.791526609 0.063261467 RES(ph)GAAEQVDNK ddPTM_A459_MK2206_30min_R2 2 RESGAAEQVDNK 12 1 Q9P2R3;Q9P2R3-2;Q9P2R3-4 Q9P2R3 ANKFY1 Rabankyrin-5 1 RES(1)GAAEQVDNK;RES(1)GAAEQVDNK 103.6 0.028597 2991600 27948 31108 31957 29660 33540 28312 36599 26986 30453 34747 TRUE FALSE 30087.72037 29563.22196 33022.43043 27236.68312 32223.05108 29389.433 31793.50734 30513.16286 33101.74689 33613.20824 0.895115996 0.879512058 0.982424236 0.81029704 0.958642533 0.8743418 0.945863516 0.907772999 0.984783918 1 15.03674063 -8.28384607 1.269702254 1.00344732 0.902990557 0.34889665 0.04637669 0.465304179 1.499533812 0.04042962 0.012839285 5.20E-09 8.28384607 -0.100456763 RES(ph)GEEFR ddPTM_A459_MK2206_30min_R1 1 RESGEEFR 8 1 D6REW6;A0A3B3IRQ7;P30533 D6REW6 LRPAP1 Alpha-2-macroglobulin receptor-associated protein 1 RES(1)GEEFR 72.434 0.033863 1998600 466.07 825.51 688.56 703.7 727.68 499.23 787.48 874.35 415.67 480.49 TRUE FALSE 426.4282991 771.769149 641.8224656 757.8990959 698.6949647 527.4959712 734.948646 866.7056501 458.880384 540.0167287 0.789657572 1.429157854 1.188523302 1.403473366 1.293839482 0.97681413 1.360973849 1.604960743 0.849752164 1 9.07686029 -9.84127476 15.31980163 1.000002959 1.233800003 0.052378126 0.252455723 0 0 0.231692484 0.056193681 1.44E-10 9.84127476 0.233797044 RES(ph)LGLESK ddPTM_A459_MK2206_30min_R1 2 RESLGLESK 9 1 Q96BH1 Q96BH1 RNF25 E3 ubiquitin-protein ligase RNF25 1 RES(0.917)LGLES(0.083)K;RES(1)LGLESK 96.334 0.024173 14904800 7940.6 6881 6121.8 5453 6608.2 5403 6203.4 6332.1 5358.5 5180.7 TRUE FALSE 7265.210272 6433.045649 5706.269272 5872.991005 6344.981401 5708.913191 5789.582505 6276.739117 5915.535251 5822.524228 1.247776735 1.10485511 0.980033581 1.008667508 1.089730356 0.980487666 0.994342364 1.078009961 1.015974347 1 12.50742902 -4.867558783 2.829059327 1.021475762 1.267527878 0.79160125 0.036141682 0.152011018 1.928268326 0.009441212 0.079774544 1.36E-05 4.867558783 0.246052116 RES(ph)LGLESK ddPTM_A459_MK2206_30min_R2 2 RESLGLESK 9 1 Q96BH1 Q96BH1 RNF25 E3 ubiquitin-protein ligase RNF25 1 RES(0.999)LGLES(0.001)K;RES(0.999)LGLES(0.001)K 71.176 0.036538 12583500 100933 111575 111398 110012 93214 86800 94228 70635 96406 97831 TRUE FALSE 108660.5081 106034.3477 115111.9537 101023.6677 89553.95 90103.23482 81855.75041 79867.23703 104791.2196 94638.78248 1.148160461 1.120411157 1.216329614 1.067465843 0.946271155 0.952075169 0.864928186 0.843916573 1.107275652 1 16.53014389 -6.100488834 3.00119708 0.939430863 1.157252389 0.625761924 0.072377694 0.163998207 2.842455079 0.02231328 0.030847507 7.93E-07 6.100488834 0.217821526 RES(ph)LSTSSDLYK ddPTM_A459_MK2206_30min_R1 2 RESLSTSSDLYK 12 1 Q8TB72-3;Q8TB72;Q8TB72-4 Q8TB72-3 PUM2 Pumilio homolog 2 1 RES(0.861)LS(0.008)T(0.025)S(0.025)S(0.081)DLYK;RES(0.725)LS(0.014)T(0.049)S(0.049)S(0.163)DLYK 132.31 0.0034151 14956300 4012.8 4293.6 3362 2618.5 2872.4 2710.81 3328.7 2774.3 2768.7 3191 TRUE FALSE 3671.490288 4014.08586 3133.796807 2820.177324 2757.986226 2864.29372 3106.648497 2750.044588 3056.516273 3586.325171 1.023747182 1.119275489 0.873818368 0.786369665 0.769028489 0.798670947 0.866248415 0.766814066 0.852269699 1 11.80829059 -5.370649345 4.453247421 0.822290535 1.070374791 0.644979205 0.068844941 0.113743217 3.651055032 0.017088346 0.037685016 4.26E-06 5.370649345 0.248084256 RES(ph)LSTSSDLYK ddPTM_A459_MK2206_30min_R2 3 RESLSTSSDLYK 12 1 Q8TB72-3;Q8TB72;Q8TB72-4 Q8TB72-3 PUM2 Pumilio homolog 2 1 RES(0.849)LS(0.048)T(0.048)S(0.048)S(0.008)DLYK;RES(0.999)LS(0.001)TSSDLYK;RES(0.99)LS(0.009)TSSDLYK 124.3 0.0064332 8435200 129218 125941 123944 124226 84607 73321 87490 73607 78646 91875 TRUE FALSE 139111.0294 119686.9531 128076.2311 114076.3384 81284.90406 76111.28203 76002.45791 83227.68763 85486.48692 88877.12627 1.565206204 1.346656424 1.441048293 1.283528656 0.914576196 0.856365245 0.855140812 0.936435404 0.961850259 1 16.43952455 -6.137415434 2.759299274 0.907478119 1.438438669 0.930967892 0.066166665 0.06524182 0.962294497 0.02092214 0.028560005 7.29E-07 6.137415434 0.530960549 RES(ph)LSYIPK ddPTM_A459_MK2206_30min_R2 1 RESLSYIPK 9 1 A1L390-3;A1L390;G3V311;A1L390-2 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RES(0.979)LS(0.021)YIPK 73.951 0.032303 4535800 78739 69919 71629 75970 76380 69936 80814 59962 77050 74443 TRUE FALSE 84767.31838 66446.92413 74017.07511 69763.00798 73380.93742 72597.46349 70203.02472 67799.23928 83751.66973 72013.93101 1.177096115 0.922695417 1.027816064 0.968743228 1.018982527 1.00810305 0.974853389 0.941473939 1.162992612 1 16.1359884 -11.16925636 5.233587356 0.99980467 1.013851078 0 0.081394026 0.000174432 1.18E-05 0.074103659 0.017722844 6.77E-12 11.16925636 0.014046408 RES(ph)PESEGPIYEGLIL ddPTM_A459_MK2206_30min_R1 1 RESPESEGPIYEGLIL 16 1 Q96QK1 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 1 RES(0.972)PES(0.028)EGPIYEGLIL 92.575 0.019186 1360700 433.89 450.75 205.68 392.98 332.09 356.13 554.29 209.76 210.38 310.31 TRUE FALSE 396.9853771 421.4060931 191.7190147 423.2473877 318.8621521 376.2937728 517.3143255 207.9260904 232.2497539 348.7535455 1.138297753 1.208320599 0.549726353 1.213600243 0.914290783 1.078967591 1.483323488 0.596197782 0.665942345 1 8.446064074 -7.804462284 24.99999539 0.723302295 1.066327851 0.268969119 0.246389278 188.4476436 109501.8259 0.133381951 0.064075281 1.57E-08 7.804462284 0.343025557 RES(ph)PSEERLEPK ddPTM_A459_MK2206_30min_R2 1 RESPSEERLEPK 12 2 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RES(0.992)PS(0.008)EERLEPK 86.214 0.034131 17268000 20137 40839 26466 33986 38754 23270 28692 28106 30011 31621 TRUE FALSE 21678.7042 38810.99465 27348.36323 31209.23508 37232.32324 24155.55616 24924.70593 31779.5507 32621.30253 30589.20936 0.7087043 1.268780575 0.894052635 1.020269426 1.217171807 0.789675728 0.814820208 1.038913766 1.0664317 1 14.9007352 -6.778616689 24.99996672 0.936453727 1.028335585 0.052395619 0.167780539 758.4323162 1103820.185 0.058022723 0.051295666 1.66E-07 6.778616689 0.091881858 RES(ph)PSPAPK ddPTM_A459_MK2206_30min_R2 3 RESPSPAPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RES(0.591)PS(0.409)PAPK;RES(0.97)PS(0.03)PAPK;RES(0.991)PS(0.009)PAPK 125.23 0.0091497 61272000 311429 197481 200262 206400 195560 142310 253511 301012 199987 276334 TRUE FALSE 335272.2437 187674.3807 206938.6351 189536.4598 187881.3318 147725.7068 220224.7012 340355.3019 217381.5078 267317.2442 1.254211058 0.702066121 0.77413126 0.709031923 0.702840299 0.552623185 0.823832753 1.273226136 0.813196726 1 18.02819338 -7.545563275 24.3780223 1.035633011 0.764551525 0.230691553 0.20069008 236.4291877 254075.5257 0.092365337 0.053332067 2.85E-08 7.545563275 -0.271081486 RES(ph)PSPAPKPR ddPTM_A459_MK2206_30min_R1 2 RESPSPAPKPR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RES(0.993)PS(0.007)PAPKPR;RES(0.998)PS(0.002)PAPKPR 97.631 0.021532 586940000 6653.7 6996.5 6815.9 5721.3 6621.9 5876.2 6777.9 5998.7 3432.2 4980.7 TRUE FALSE 6087.767875 6541.026578 6353.255698 6161.955517 6358.135701 6208.905366 6325.758658 5946.253998 3788.989472 5597.746718 1.087539001 1.168510636 1.134966625 1.100792127 1.135838404 1.109179403 1.130054462 1.062258494 0.676877619 1 12.4506305 -8.089132562 6.228458669 0.841213136 1.123180764 0.690232623 0.075348405 0.116609217 6.618186804 0.046725581 0.017364662 8.14E-09 8.089132562 0.281967628 RES(ph)WISDIR ddPTM_A459_MK2206_30min_R2 1 RESWISDIR 9 1 I3L359;I3L2Y6;I3L1M1;I3NI06;I3L1G9;I3L167;A0A0A6YYL4;P57737-2;P57737-4;P57737;P57737-3 I3L359 CORO7;CORO7-PAM16 Coronin;Coronin-7 1 RES(1)WISDIR 82.774 0.040507 0 7576.9 8789.2 9800.9 10895 10002 9931.9 9846.2 8973.9 10331 8985.3 TRUE FALSE 8156.99329 8352.741109 10127.65711 10004.84365 9609.271224 10309.86541 8553.382113 10146.81954 11229.57171 8692.110397 0.938436458 0.960956629 1.165155141 1.151025837 1.105516472 1.186117634 0.984039747 1.167359718 1.291926954 1 13.08549078 -5.251220681 20.01457056 1.133838712 0.949695842 0.424544312 0.084577192 43.16622544 84536.91849 0.021237622 0.054168131 5.61E-06 5.251220681 -0.184142871 RESAAS(ph)GLGGLLEEEGAGAGAAQEEVLEPGR ddPTM_A459_MK2206_30min_R2 2 RESAASGLGGLLEEEGAGAGAAQEEVLEPGR 31 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RES(0.444)AAS(0.556)GLGGLLEEEGAGAGAAQEEVLEPGR;RES(0.092)AAS(0.908)GLGGLLEEEGAGAGAAQEEVLEPGR 107.15 2.18E-11 6454300 7620.7 7898.5 7785.7 7771.8 5265.2 6061.2 9471.9 5978.6 8516.2 7806.1 TRUE FALSE 8204.146651 7506.271975 8045.271352 7136.819079 5058.461792 6291.863213 8228.228152 6760.023548 9256.923682 7551.387596 1.086442266 0.994025519 1.065403047 0.945100353 0.669871825 0.833206233 1.089631283 0.89520283 1.22585731 1 12.88252605 -9.89066569 11.42992601 0.999997494 0.967843032 0 0.147777109 0 0 0.148945447 0.036124577 1.29E-10 9.89066569 -0.032154463 RESEALDS(ph)PNSK ddPTM_A459_MK2206_30min_R2 1 RESEALDSPNSK 12 1 P0C7T5 P0C7T5 ATXN1L Ataxin-1-like 1 RES(0.006)EALDS(0.993)PNSK 115.8 0.0092778 5318100 32399 40477 33089 38547 22035 22634 27284 17784 19614 20461 TRUE FALSE 34879.49235 38466.97104 34192.17075 35397.58679 21169.79518 23495.35273 23701.57803 20108.42986 21319.99027 19793.35925 1.762181544 1.943428125 1.727456685 1.788356709 1.06954029 1.187032097 1.19745101 1.015917996 1.077128445 1 14.27272886 -6.258607768 23.38415572 1.102080494 1.809653958 0.950877662 0.079496735 20.68879905 170852.3034 0.024432245 0.030109605 5.51E-07 6.258607768 0.707573464 RESGEEFR ddPTM_A459_MK2206_30min_R1 1 RESGEEFR 8 1 D6REW6;A0A3B3IRQ7;P30533 D6REW6 LRPAP1 Alpha-2-macroglobulin receptor-associated protein 0 125.82 0.0067562 1496900 377.14 537.28 426.09 552.71 443.89 434.83 609.29 607.24 92.679 421.72 FALSE TRUE 345.0622626 502.3029743 397.168198 595.27982 426.2089213 459.4496988 568.6453758 601.9309647 102.3133137 473.9658574 0.728031898 1.059787254 0.83796795 1.255955066 0.899239712 0.969372987 1.199760208 1.269988028 0.215866422 1 8.888639327 -8.248366881 24.99788067 0.607933133 1.029413077 0.321422581 0.243844826 748.7396895 1431784.256 0.157387137 0.058694763 5.64E-09 8.248366881 0.421479943 RESGEEFR ddPTM_A459_MK2206_30min_R2 2 RESGEEFR 8 1 D6REW6;A0A3B3IRQ7;P30533 D6REW6 LRPAP1 Alpha-2-macroglobulin receptor-associated protein 0 ; 125.16 0.0057889 0 15085.2 18819.4 15862.3 18792.8 15116.5 21425 17424.5 14089.5 17626.1 15262.9 FALSE TRUE 16240.13451 17884.85596 16391.14117 17257.36812 14522.95026 22240.34339 15136.64222 15931.04603 19159.18632 14764.87282 1.099916993 1.21131121 1.110144419 1.168812514 0.983614991 1.506301047 1.025179316 1.078982949 1.297619461 1 13.84988131 -10.67510088 5.368608011 0.999995431 1.162646916 0.106985812 0.142605387 7.42E-06 1.17E-06 0.131399997 0.031868285 2.11E-11 10.67510088 0.162651486 RESIS(ph)PQPADSACSSPAPSTGK ddPTM_A459_MK2206_30min_R2 1 RESISPQPADSACSSPAPSTGK 22 1 Q9GZR1-2;Q9GZR1;H0Y4F4;F8W6D9 Q9GZR1-2 SENP6 Sentrin-specific protease 6 1 RES(0.197)IS(0.803)PQPADSACSSPAPSTGK 116.28 1.72E-05 5263600 16378 12864 16127 21757 18011 17572 17638 14542 15130 17674 TRUE FALSE 17631.91227 12225.19247 16664.66613 19979.3835 17303.79764 18240.71477 15322.10941 16442.68933 16445.98005 17097.29883 1.031268883 0.715036486 0.974695845 1.168569591 1.012077862 1.066876994 0.896171352 0.961712695 0.961905165 1 14.06148079 -5.503730124 24.94959117 1.010847897 0.866081032 0.230876631 0.09807978 951.5820773 1239856.904 0.025568116 0.051885166 3.14E-06 5.503730124 -0.144766864 RESPSPAPKPR ddPTM_A459_MK2206_30min_R1 1 RESPSPAPKPR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 0 70.412 0.042077 5372500 1719.8 1667.2 1797.8 1879.1 1716.8 1408.7 1599.7 1822.5 1045.1 1406.8 FALSE TRUE 1573.521979 1558.664977 1675.770345 2023.828608 1648.416221 1488.459377 1492.986932 1806.566075 1153.741885 1581.085005 0.99521656 0.985819847 1.059886306 1.280025174 1.04258545 0.941416415 0.94427999 1.142611605 0.729715279 1 10.62669922 -6.628197167 5.361453446 0.960888053 1.082120122 0.203296857 0.120577594 0.375391775 16.44933602 0.040683497 0.040592078 2.35E-07 6.628197167 0.12123207 RESVAS(ph)GDDRAEEDMDEAIEK ddPTM_A459_MK2206_30min_R1 2 RESVASGDDRAEEDMDEAIEK 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 RES(0.106)VAS(0.894)GDDRAEEDMDEAIEK;RES(0.08)VAS(0.92)GDDRAEEDMDEAIEK 74.665 0.0036002 15081200 2600.6 3298.9 3598.1 2148.1 2874.9 3149.6 4160.3 3099.2 4426.2 5232.2 TRUE FALSE 2379.405314 3084.14101 3353.870997 2313.547034 2760.386645 3327.92763 3882.773978 3072.104021 4886.319329 5880.404437 0.404632936 0.524477703 0.570346994 0.393433319 0.469421223 0.565935161 0.660290295 0.522430737 0.830949534 1 12.52169967 -8.46481688 0.676928714 1.009845884 0.477811158 0.829421329 0.074832032 0.301075504 0.3194954 0.074605497 0.030553104 3.43E-09 8.46481688 -0.532034726 down RESVAS(ph)GDDRAEEDMDEAIEK ddPTM_A459_MK2206_30min_R2 1 RESVASGDDRAEEDMDEAIEK 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 RES(0.219)VAS(0.781)GDDRAEEDMDEAIEK 44.1 0.041148 6975800 37238 30856 36167 34402 30871 33961 45598 33577 29992 42238 TRUE FALSE 40088.96991 29323.73591 37372.78973 31591.24655 29658.84943 35253.40965 39610.92783 37965.62919 32600.64995 40859.77752 0.981135296 0.717667537 0.914659648 0.773162471 0.725869088 0.862790054 0.96943572 0.929168769 0.797866555 1 15.31839373 -7.003067437 24.97942487 0.917914842 0.816581544 0.219452356 0.089736177 188.490796 1534969.887 0.030890687 0.02671956 9.93E-08 7.003067437 -0.101333298 REVMY(ph)T(ph)AFK ddPTM_A459_MK2206_30min_R2 2 REVMYTAFK 9 1 M0QXH4;H3BRH5;G3V1S7;M0R2V0;O00219-2;O00219;Q92839 M0QXH4 HAS1;HAS3 Hyaluronan synthase 3;Hyaluronan synthase 1 2 REVMY(1)T(1)AFK;REVMY(1)T(1)AFK 64.82 0.030291 42385000 371810 389100 360430 354000 336030 292210 431300 335590 256133 349220 TRUE FALSE 400276.0595 369777.8598 372446.5563 325077.0676 322835.7738 303330.2563 374669.7919 379452.7653 278410.9854 337824.98 1.184862231 1.094584124 1.102483766 0.962264743 0.955630261 0.897891732 1.109064794 1.123222934 0.824127882 1 18.36591648 -5.657835088 4.33859438 0.987689759 1.130756751 0.376274335 0.086150637 0.252937009 8.378665282 0.024569947 0.043815614 2.20E-06 5.657835088 0.143066992 REVS(ph)PAPAVAGQSK ddPTM_A459_MK2206_30min_R1 4 REVSPAPAVAGQSK 14 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 REVS(1)PAPAVAGQSK;REVS(1)PAPAVAGQSK;REVS(1)PAPAVAGQSK;REVS(1)PAPAVAGQSK 168.42 0.00035287 50250800 13409.2 12964.7 12040.4 10567.1 12695.2 11211.5 12325.8 12172.4 11926.1 10617.4 TRUE FALSE 12268.67713 12120.69567 11223.13119 11380.97987 12189.5233 11846.28544 11503.56837 12065.97799 13165.86077 11932.76367 1.028150516 1.015749244 0.940530753 0.953758927 1.021517197 0.992752875 0.964032197 1.011163744 1.103337093 1 13.54264059 -8.010777745 23.40376973 1.053529195 0.987463566 0.330423465 0.035884615 231.8207678 503390.1905 0.021694124 0.009305967 9.75E-09 8.010777745 -0.066065629 REVS(ph)PAPAVAGQSK ddPTM_A459_MK2206_30min_R2 4 REVSPAPAVAGQSK 14 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 REVS(1)PAPAVAGQSK;REVS(1)PAPAVAGQSK;REVS(1)PAPAVAGQSK;REVS(1)PAPAVAGQSK 142.23 0.00028126 192932000 673648 749291 717476 756686 760288 616122 773612 654031 642706 759615 TRUE FALSE 725223.0088 712082.2985 741396.2917 694862.3333 730435.273 639568.9544 672035.8151 739515.0973 698607.4061 734828.8248 0.986927818 0.969045136 1.008937411 0.945611154 0.994020986 0.870364543 0.914547433 1.006377366 0.950707679 1 19.48704869 -6.061719372 2.025888241 0.94907394 0.98499735 0.093768486 0.040709396 0.749491326 6.116496383 0.013740063 0.020741449 8.68E-07 6.061719372 0.03592341 RFDAMPFTLR ddPTM_A459_MK2206_30min_R1 1 RFDAMPFTLR 10 1 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 120.77 0.0067444 6431500 2960.3 2806 3545 2775.1 3090.9 2690.9 2668.4 2845.7 2261.8 1755.4 FALSE TRUE 2708.51094 2623.32889 3304.375277 2988.838683 2967.782908 2843.256433 2490.395905 2820.820345 2496.922204 1972.872205 1.372877034 1.329700365 1.674905891 1.514968215 1.504295565 1.441176183 1.262319931 1.429803886 1.26562795 1 10.94608179 -8.756731421 0.573004142 0.990438131 1.4812925 0.655480328 0.101793936 0.788954562 0.552309156 0.125920544 0.049992473 1.75E-09 8.756731421 0.490854369 RFDAQTGADR ddPTM_A459_MK2206_30min_R1 3 RFDAQTGADR 10 1 P43686;P43686-2 P43686 PSMC4 26S protease regulatory subunit 6B 0 ;; 160.91 0.00021417 14600000 8685 9197.9 9050.2 7809.1 9287.4 8299.6 9367.2 8377.6 6859.6 6752.4 FALSE TRUE 7946.295143 8599.115038 8435.897639 8410.558235 8917.463192 8769.51618 8742.331179 8304.355526 7572.679967 7588.93829 1.047089176 1.133111736 1.111604459 1.108265467 1.175060707 1.15556562 1.151983432 1.094271057 0.997857629 1 12.88968235 -8.173475921 3.334869463 0.996189796 1.127972153 0.695959361 0.033049575 0.140605981 2.820039879 0.028428148 0.009029383 6.71E-09 8.173475921 0.131782358 RFDAQTGADR ddPTM_A459_MK2206_30min_R2 4 RFDAQTGADR 10 1 P43686;P43686-2 P43686 PSMC4 26S protease regulatory subunit 6B 0 ;;; 172.21 0.00020437 27857100 37199.2 47489.8 43951 49569 44376.4 46571.9 44443.8 39897.6 46029.8 36156.3 FALSE TRUE 40047.19935 45131.52559 45416.3044 45519.05414 42633.95956 48344.22629 38608.27567 45112.35331 50033.3888 34976.52289 1.144973715 1.290337685 1.298479684 1.301417361 1.218930758 1.382190747 1.103834014 1.289789538 1.430484927 1 15.09409925 -10.53809761 5.201370296 0.999997943 1.272538091 0.436858341 0.093112731 2.15E-06 4.06E-07 0.087080067 0.021119859 2.90E-11 10.53809761 0.272540147 RFDDAVVQSDMK ddPTM_A459_MK2206_30min_R1 9 RFDDAVVQSDMK 12 1 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PNE6;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ;;;;;;;; 236.28 5.51E-13 412553000 74663.8 74750.6 75066.4 67522.7 73949.6 64144.8 72363.9 71679.6 61361.4 55728.4 FALSE TRUE 68313.25173 69884.32235 69971.10191 72723.31005 71004.03084 67776.62314 67536.63627 71052.91281 67740.13711 62632.45492 1.090700529 1.115784499 1.117170036 1.16111224 1.133661948 1.08213263 1.07830096 1.134442405 1.081550088 1 15.93462281 -8.613430945 4.364707714 1.000013205 1.114106067 0.669915722 0.02424787 0.317948396 13.87569298 0.025343975 0.006617004 2.44E-09 8.613430945 0.114092862 RFDDAVVQSDMK ddPTM_A459_MK2206_30min_R2 8 RFDDAVVQSDMK 12 1 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PNE6;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ;;;;;;; 155.14 0.00057276 148387200 861822 1089778 1035630 1096142 1141110 1024318 1188091 908198 1005315 1040263 FALSE TRUE 927803.7549 1035661.209 1070157.387 1006583.692 1096304.288 1063299.139 1032093.225 1026902.597 1092755.482 1006319.304 0.921977499 1.02915765 1.063437205 1.000262728 1.089419913 1.056622024 1.025612071 1.020454038 1.085893392 1 19.94065671 -4.766477622 4.119884889 1.043681573 0.910002581 0.58727639 0.030160764 0.15424185 5.108627459 0.007224013 0.062570825 1.71E-05 4.766477622 -0.133678992 RFDEILEASDGIMVAR ddPTM_A459_MK2206_30min_R1 3 RFDEILEASDGIMVAR 16 1 P14618;P14618-3;B4DNK4;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;; 265.43 1.06E-39 67472000 6067.73 6883.43 7427.18 6736.39 7299.63 6181.03 7223.75 6521.91 5902.75 5394.85 FALSE TRUE 5551.637701 6435.317456 6923.043715 7255.227925 7008.87028 6530.994577 6741.866818 6464.889628 6516.361986 6063.204747 0.915627615 1.061372282 1.141812623 1.196599526 1.155967936 1.07715224 1.111931247 1.066249599 1.074738898 1 12.56586483 -10.50205765 14.76748272 1.000003076 1.094571805 0.117919602 0.071647994 0 0 0.073666842 0.017866834 3.15E-11 10.50205765 0.094568729 RFDGVQDPR ddPTM_A459_MK2206_30min_R1 1 RFDGVQDPR 9 1 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 0 113.18 0.012538 2705800 2243.5 2488.9 1640.4 1916.2 2811.1 2305.6 2338.5 2010.6 1964.1 1859.6 FALSE TRUE 2052.678544 2326.872158 1529.054218 2063.786056 2699.127934 2436.14108 2182.502932 1993.021536 2168.275224 2089.981287 0.982151638 1.113345929 0.73161144 0.987466284 1.291460335 1.165628178 1.044269126 0.953607359 1.037461549 1 11.02927431 -4.45136569 13.09069734 1.036593 0.512339757 0.013499644 0.138279059 644855.694 3559403.516 0.03718355 8856968.421 3.54E-05 4.45136569 -0.524253243 RFDYDWER ddPTM_A459_MK2206_30min_R1 1 RFDYDWER 8 1 Q93008;Q93008-3;O00507-2;O00507 Q93008 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y 0 123.21 0.0081515 5946300 915.5 725.89 853.28 914.4 1337.5 786.11 976.3 694.33 576.92 747.59 FALSE TRUE 837.6319175 678.6344291 795.361731 984.8272464 1284.224543 830.6188689 911.1728084 688.259546 636.8928985 840.2070932 0.99693507 0.807699 0.946625823 1.172124414 1.528461915 0.988588261 1.084462171 0.819154648 0.75801895 1 9.714601155 -7.759157116 24.92442992 0.841440057 1.077622691 0.21722942 0.186892202 91.27222406 996815.9364 0.102625232 0.055569548 1.74E-08 7.759157116 0.236182634 RFDYDWER ddPTM_A459_MK2206_30min_R2 3 RFDYDWER 8 1 Q93008;Q93008-3;O00507-2;O00507 Q93008 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y 0 ;; 113.62 0.014435 7029500 15686.1 20194.1 16113.9 15120.9 19985.9 20594.4 19664.7 12834.9 20321.7 16272.9 FALSE TRUE 16887.03988 19191.29036 16651.12938 13885.4741 19201.15314 21378.13432 17082.70127 14512.4655 22089.24473 15741.91661 1.072743574 1.219120317 1.057757438 0.882070109 1.219746847 1.35803885 1.085172898 0.921899529 1.403211901 1 13.94232358 RFEELGVK ddPTM_A459_MK2206_30min_R2 1 RFEELGVK 8 1 Q04760-2;Q04760 Q04760-2 GLO1 Lactoylglutathione lyase 0 91.265 0.036676 6017500 29229 47177 34794 36411 36611 38335 38305 30294 35437 32185 FALSE TRUE 31466.79471 44834.25878 35954.01459 33436.10483 35173.46818 39793.86529 33275.50749 34253.52981 38519.2462 31134.80609 1.010662942 1.440004433 1.154785242 1.073914022 1.129715345 1.278115084 1.068755893 1.100168401 1.237176365 1 14.92624067 -14.52287874 0.169384408 0.362510463 1.207167825 0.135062146 0.119583883 258.8222168 2.429842567 55.67699574 0.428849764 3.00E-15 14.52287874 0.844657362 RFIGS(ph)PR ddPTM_A459_MK2206_30min_R2 2 RFIGSPR 7 1 P23443-3;P23443-5;P23443-2;P23443;K7ERJ3;P23443-4 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 RFIGS(1)PR;RFIGS(1)PR 91.265 0.014663 15712700 21782.3 26734 22975.8 30680 27392 29560 30503 24244.8 29334 29088 TRUE FALSE 23449.96964 25406.42843 23741.8017 28173.34586 26316.45245 30684.92651 26497.91946 27413.6786 31885.4183 28138.86094 0.833365987 0.902894701 0.843737128 1.001225526 0.935235172 1.090482183 0.941684154 0.97422844 1.13314531 1 14.78027631 -5.895054606 1.27549905 1.018271658 0.85296472 0.543729151 0.061892504 0.367492161 1.208609123 0.02164187 0.046083768 1.27E-06 5.895054606 -0.165306938 RFPDLNR ddPTM_A459_MK2206_30min_R2 1 RFPDLNR 7 1 A0A2R8Y7S8;A0A2R8YFH0;E9PHA6;A0A2R8Y6P0;A0A2R8YG02;P43246-2;P43246 A0A2R8Y7S8 MSH2 DNA mismatch repair protein Msh2 0 101.6 0.023881 0 6658.5 7893.9 5954.6 8388 7486.8 8225.4 6795.6 6782.2 8751.8 7878.1 FALSE TRUE 7168.27988 7501.900405 6153.123392 7702.673568 7192.830614 8538.423361 5903.329557 7668.656827 9513.015744 7621.038242 0.940590987 0.984367243 0.8073865 1.010711838 0.943812429 1.120375346 0.774609623 1.006248307 1.248257185 1 12.89577184 -8.011051995 24.56922411 1.125170026 0.942609758 0.315350954 0.107384853 456.7768951 1015435.036 0.061752243 0.026396252 9.75E-09 8.011051995 -0.182560268 RFPEAEALS(ph)PEQAAHYLR ddPTM_A459_MK2206_30min_R1 6 RFPEAEALSPEQAAHYLR 18 1 Q2NKX8 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR 107.83 0.00080198 46523700 10449.8 10897.5 10766.7 10084.1 11890.1 10360.6 10970.7 9955.4 8574.7 6971.78 TRUE FALSE 9560.989636 10188.07077 10035.8864 10860.77913 11416.49214 10947.20822 10238.86462 9868.360987 9466.07075 7835.496741 1.22021487 1.300245678 1.28082325 1.38609963 1.457022129 1.397130084 1.306728209 1.259442932 1.208100911 1 12.93580902 -8.592693421 1.148171363 1.002502044 1.341151374 0.719547051 0.063765189 0.340301665 0.966857963 0.068442679 0.021567508 2.55E-09 8.592693421 0.33864933 RFPEAEALS(ph)PEQAAHYLR ddPTM_A459_MK2206_30min_R2 2 RFPEAEALSPEQAAHYLR 18 1 Q2NKX8 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR 92.289 0.0025913 17884600 20410.7 27157 23564 32672 31420 30452 26888 22783 25047 28658 TRUE FALSE 21973.35889 25808.42287 24349.612 30002.59309 30186.29293 31610.8722 23357.5733 25760.81633 27225.54279 27722.89181 0.792607028 0.930942668 0.878321503 1.082231727 1.088858014 1.140244402 0.842537404 0.92922544 0.982059988 1 14.75879013 -5.056418682 1.430695293 1.003316275 0.78471145 0.342097083 0.087341014 0.969036166 2.598008325 0.028448326 0.263332425 8.78E-06 5.056418682 -0.218604825 RFPTDYAST(ph)SEDEFGSNR ddPTM_A459_MK2206_30min_R1 1 RFPTDYASTSEDEFGSNR 18 1 H0Y2V6;Q5SW79-3;Q5SW79 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 RFPTDYAS(0.003)T(0.62)S(0.377)EDEFGSNR 106.47 0.0020701 4981200 910.73 929.49 985.12 606.15 1091.5 713.85 727.46 1050.1 678.75 703.71 TRUE FALSE 833.2676311 868.9800321 918.2527991 652.835778 1048.023244 754.2675701 678.9324707 1040.919086 749.3084914 790.8909075 1.053580997 1.098735646 1.161035979 0.825443524 1.325117325 0.953693566 0.858440101 1.316134851 0.947423323 1 9.627334898 RFPTDYASTS(ph)EDEFGSNR ddPTM_A459_MK2206_30min_R2 3 RFPTDYASTSEDEFGSNR 18 1 H0Y2V6;Q5SW79-3;Q5SW79 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 RFPTDYAS(0.001)T(0.072)S(0.927)EDEFGSNR;RFPTDYAS(0.007)T(0.27)S(0.723)EDEFGSNR;RFPTDYAST(0.016)S(0.981)EDEFGS(0.003)NR 106 0.00086865 6905900 21583.4 26139.3 25244.4 25251.4 27977.4 27679 26158.1 19163.2 23415.4 25043 TRUE FALSE 23235.8417 24841.26037 26086.0357 23188.27984 26878.8667 28732.34374 22723.51005 21667.89604 25452.02917 24225.84896 0.959134259 1.02540309 1.076785203 0.95717099 1.109511858 1.186020097 0.937986119 0.894412248 1.05061454 1 14.5642596 RFQDAVR ddPTM_A459_MK2206_30min_R1 1 RFQDAVR 7 1 Q01813;Q01813-2;B1APP6 Q01813 PFKP "ATP-dependent 6-phosphofructokinase, platelet type" 0 148.04 0.0038573 7966500 3833.1 4048.8 3854.6 3766.6 3906.3 3775.2 3859.2 4179.7 1941.4 3121.2 FALSE TRUE 3507.074717 3785.222384 3592.960492 4056.704185 3750.703799 3988.948562 3601.75981 4143.157324 2143.215477 3507.87782 0.999771057 1.079063348 1.024254742 1.156455382 1.069223044 1.137140108 1.026763187 1.181100807 0.6109721 1 11.77638278 -8.248769729 24.99961956 0.805486025 1.083807163 0.53658437 0.103613414 458.7215784 905149.0803 0.064127104 0.023885717 5.64E-09 8.248769729 0.278321138 RFQDAVR ddPTM_A459_MK2206_30min_R2 4 RFQDAVR 7 1 Q01813;Q01813-2;B1APP6 Q01813 PFKP "ATP-dependent 6-phosphofructokinase, platelet type" 0 ;;; 145.34 0.0045115 19716100 60761 83575 71585 88106 81763 83092 88052 70318 74825 76126 FALSE TRUE 65412.90888 79424.78703 73971.60817 80907.45796 78552.57379 86254.12429 76490.66663 79508.80404 81333.14325 73642.01485 0.888255285 1.078525448 1.004475615 1.09865894 1.066681485 1.171262417 1.038682426 1.079666332 1.104439407 1 16.16824148 -4.056907532 1.459452668 1.078884308 1.24E-17 0.546096198 0.04894406 6.191394129 2.558223765 0.013191891 16.28551926 8.77E-05 4.056907532 -1.078884308 RFQTGMHREK ddPTM_A459_MK2206_30min_R1 2 RFQTGMHREK 10 2 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 0 ; 82.831 0.021916 10349710 11902.12 1120.08 512.3 807.26 28207.1 29388.9 26137 9972.1 192.1 465.61 FALSE TRUE 10889.78219 1047.162588 477.5265033 869.4353051 27083.55148 31052.87412 24393.44842 9884.914981 212.0694824 523.293282 20.81009363 2.001100768 0.912540863 1.661468502 51.75597014 59.3412436 46.6152524 18.88981824 0.405259325 1 9.031475928 -8.176875791 4.171722328 0.567337769 25.94847768 0.198018301 20.09438409 0.433893898 13.31406993 18.19264847 6.135335415 6.65E-09 8.176875791 25.38113991 RFS(ph)DFLGLYEK ddPTM_A459_MK2206_30min_R1 2 RFSDFLGLYEK 11 1 Q13596-2;Q13596;Q13596-3 Q13596-2 SNX1 Sorting nexin-1 1 RFS(1)DFLGLYEK;RFS(1)DFLGLYEK 103.39 0.0068485 7201100 6580.2 6525.6 6122.6 5525.7 6448.4 6395.1 6293.5 6090.5 6018.7 5901.3 TRUE FALSE 6020.519436 6100.782254 5707.014971 5951.290371 6191.546573 6757.185035 5873.672098 6037.251401 6644.365403 6632.397597 0.907744047 0.919845676 0.860475399 0.897306032 0.93353067 1.018814831 0.885603134 0.91026681 1.001804446 1 12.69531478 -6.373310411 4.179863256 0.954763558 0.895554761 0.355213381 0.041486218 0.302469481 8.978568502 0.013502197 0.015424701 4.23E-07 6.373310411 -0.059208797 RFS(ph)DSEER ddPTM_A459_MK2206_30min_R1 1 RFSDSEER 8 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 RFS(0.844)DS(0.156)EER 108.7 0.022924 21762000 3350.6 3800.7 3783 3048.9 3912.7 3163.9 3311.1 3050.8 2191.7 2365 TRUE FALSE 3065.613875 3553.273739 3526.2205 3283.726806 3756.848874 3343.037284 3090.22256 3024.127177 2419.535058 2657.994055 1.153356182 1.336825315 1.326647249 1.235415407 1.413415078 1.257729406 1.162614549 1.137747909 0.910286106 1 11.37612216 -7.813974827 1.441870174 0.959844935 1.294185821 0.746725836 0.073937151 0.202962236 0.775863428 0.059846701 0.022393706 1.53E-08 7.813974827 0.334340886 RFS(ph)DSEER ddPTM_A459_MK2206_30min_R2 1 RFSDSEER 8 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 RFS(0.99)DS(0.01)EER 67.93 0.040109 2292200 5332 5951.1 5215.4 5484.1 7962.3 5118.1 6010.7 4278.6 4983 6101.8 TRUE FALSE 5740.22202 5655.577028 5389.278833 5036.031487 7649.660095 5312.872882 5221.48787 4837.827711 5416.412333 5902.698766 0.972474159 0.95813411 0.913019459 0.853174402 1.295959763 0.900075219 0.884593315 0.819595901 0.917616254 1 12.527159 -10.63815538 4.635001484 1.000003917 0.946131762 0.016534089 0.124774897 5.68E-06 1.08E-06 0.124638596 0.030226902 2.30E-11 10.63815538 -0.053872155 RFS(ph)DSEGEETVPEPR ddPTM_A459_MK2206_30min_R1 4 RFSDSEGEETVPEPR 15 1 A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286 A0A1B0GWH8 CLN3 Battenin 1 RFS(0.992)DS(0.008)EGEETVPEPR;RFS(0.998)DS(0.002)EGEETVPEPR;RFS(0.999)DS(0.001)EGEETVPEPR;RFS(0.999)DS(0.001)EGEETVPEPR 238.12 1.02E-19 28839800 6260 6198.3 5285.24 4708.23 6318.7 5372.7 6364.9 5813 5704.5 4926 TRUE FALSE 5727.554127 5794.789543 4926.492634 5070.85869 6067.012799 5676.897631 5940.309134 5762.177554 6297.503189 5536.270069 1.034551071 1.046695604 0.889857715 0.915934127 1.095866481 1.025401138 1.072980375 1.040804997 1.137499275 1 12.43469861 -6.270077917 24.9896971 1.062842166 0.971262061 0.379692321 0.05655727 711.2470927 2057502.942 0.018238021 0.020999305 5.37E-07 6.270077917 -0.091580105 RFS(ph)DSEGEETVPEPR ddPTM_A459_MK2206_30min_R2 3 RFSDSEGEETVPEPR 15 1 A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286 A0A1B0GWH8 CLN3 Battenin 1 RFS(0.976)DS(0.005)EGEET(0.019)VPEPR;RFS(0.778)DS(0.222)EGEETVPEPR;RFS(0.938)DS(0.062)EGEETVPEPR 120.32 0.0032426 16769300 40983.8 36734.4 37620.8 51626.6 44990.5 47449.1 49476.2 32084.5 43276 36783.6 TRUE FALSE 44121.55124 34910.22311 38875.0587 47408.54163 43223.94691 49254.80875 42979.91551 36278.05431 47040.06825 35583.35414 1.239949193 0.98108298 1.092506865 1.332323576 1.214723793 1.384209272 1.207865772 1.019523178 1.321968358 1 15.11891489 -4.392783383 22.09568228 1.180435181 45.82577365 0.01801725 0.138735708 5074.200574 860541.1449 0.034053921 17027.28134 4.05E-05 4.392783383 44.64533847 RFS(ph)EGVLQSPSQDQEK ddPTM_A459_MK2206_30min_R1 1 RFSEGVLQSPSQDQEK 16 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RFS(1)EGVLQSPSQDQEK 200.9 1.18E-06 5811700 2126.8 1790.4 1673.5 1410.5 1598.5 1505.2 1571.2 1543.7 1412 1205 TRUE FALSE 1945.904492 1673.844635 1559.907483 1519.136954 1534.82836 1590.423123 1466.388115 1530.203594 1558.782453 1354.284497 1.436850599 1.235962339 1.151831455 1.121726607 1.133313099 1.174364121 1.082777007 1.129898184 1.151000736 1 10.40331513 -4.169756082 1.046458359 1.117792859 2.193275028 0.831337027 0.044495643 2.043149299 0.740419145 0.013160903 3.339539761 6.76E-05 4.169756082 1.075482169 RFS(ph)EGVLQSPSQDQEK ddPTM_A459_MK2206_30min_R2 4 RFSEGVLQSPSQDQEK 16 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RFS(0.999)EGVLQS(0.001)PSQDQEK;RFS(1)EGVLQSPSQDQEK;RFS(1)EGVLQSPSQDQEK;RFS(0.956)EGVLQS(0.041)PS(0.003)QDQEK 134.04 0.00024895 29623800 139934 144377 149582 165916 148112 131190 146359 118830 148465 149798 TRUE FALSE 150647.4546 137207.4481 154568.9892 152360.1321 142296.3787 136182.5274 127141.8875 134361.489 161378.2173 144910.1035 1.039592485 0.946845284 1.066654329 1.051411381 0.981963129 0.93977248 0.87738456 0.927205804 1.113643655 1 17.14479866 -6.470164375 5.937309188 0.96103983 1.022994529 0.127651507 0.064959202 0.415663218 33.44101898 0.021163286 0.023653663 3.39E-07 6.470164375 0.061954698 RFS(ph)FCCSPEPEAEAEAAAGPGPCER ddPTM_A459_MK2206_30min_R1 4 RFSFCCSPEPEAEAEAAAGPGPCER 25 1 Q13501;E7EMC7;E3W990;D6RBF1;C9J6J8 Q13501 SQSTM1 Sequestosome-1 1 RFS(0.9)FCCS(0.1)PEPEAEAEAAAGPGPCER;RFS(0.911)FCCS(0.089)PEPEAEAEAAAGPGPCER;RFS(0.905)FCCS(0.095)PEPEAEAEAAAGPGPCER;RFS(0.828)FCCS(0.172)PEPEAEAEAAAGPGPCER 191.19 5.00E-27 414204000 4280.9 4841.87 4021.73 4240.09 4594.67 3766.82 4605.45 4553 3381.93 3239.47 TRUE FALSE 3916.786975 4526.663383 3748.746173 4566.662466 4411.654565 3980.094093 4298.228834 4513.193601 3733.493726 3640.8 1.075803937 1.243315585 1.029649026 1.25430193 1.211726699 1.093192181 1.180572631 1.239615909 1.025459714 1 11.83003978 -8.374081439 6.060572057 1.003118672 1.166324776 0.412966171 0.073268411 0.220929081 9.922125686 0.066855172 0.017353813 4.23E-09 8.374081439 0.163206103 RFS(ph)FCCSPEPEAEAEAAAGPGPCER ddPTM_A459_MK2206_30min_R2 3 RFSFCCSPEPEAEAEAAAGPGPCER 25 1 Q13501;E7EMC7;E3W990;D6RBF1;C9J6J8 Q13501 SQSTM1 Sequestosome-1 1 RFS(0.5)FCCS(0.5)PEPEAEAEAAAGPGPCER;RFS(0.954)FCCS(0.046)PEPEAEAEAAAGPGPCER;RFS(0.758)FCCS(0.242)PEPEAEAEAAAGPGPCER 137.9 1.72E-08 246605000 63992 78139 73606 77580 69676 88754 75996 60806 66463 71297 TRUE FALSE 68891.27672 74258.73088 76059.9873 71241.46583 66940.17015 92131.59566 66017.63391 68753.55298 72243.8316 68970.58473 0.998850118 1.076672485 1.102788785 1.032925357 0.970561152 1.335809984 0.957185359 0.996853271 1.047458592 1 16.07369358 RFS(ph)FSQR ddPTM_A459_MK2206_30min_R1 4 RFSFSQR 7 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 RFS(0.948)FS(0.052)QR;RFS(0.948)FS(0.052)QR;RFS(0.96)FS(0.04)QR;RFS(0.998)FS(0.002)QR 106.88 0.0086932 81220600 9806.7 10469.1 10663.4 10054.9 11193.5 10249.4 10602.2 9352.1 8195.1 8096.8 TRUE FALSE 8972.588668 9787.559687 9939.598118 10829.33014 10747.63919 10829.71217 9894.946583 9270.335576 9047.009971 9099.892712 0.98601038 1.07556869 1.092276407 1.19005031 1.181073177 1.190092292 1.087369587 1.018730206 0.994188641 1 13.15163382 -7.714712307 3.282315624 1.000900586 1.122967862 0.432233703 0.058850374 0.254390585 5.558799157 0.037085219 0.018325534 1.93E-08 7.714712307 0.122067276 RFS(ph)FSQR ddPTM_A459_MK2206_30min_R2 3 RFSFSQR 7 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 RFS(0.919)FS(0.081)QR;RFS(0.971)FS(0.029)QR;RFS(0.945)FS(0.055)QR 81.525 0.022005 168792000 87472 106807 100474 118231 122591 106840 99632 71774 100773 110707 TRUE FALSE 94168.92357 101503.1197 103823.753 108571.1491 117777.4614 110905.8711 86550.19872 81155.10824 109538.0534 107094.6397 0.879305667 0.947788984 0.96945798 1.013786959 1.099751227 1.035587509 0.808165553 0.757788704 1.022815462 1 16.70852675 -7.253186159 24.97045904 0.877008154 0.993991825 0.186733605 0.09194345 860.3724222 2603096.451 0.036731147 0.027958387 5.58E-08 7.253186159 0.116983671 RFS(ph)ISFAR ddPTM_A459_MK2206_30min_R1 1 RFSISFAR 8 1 A0A087WZV0;O43314;K7ENU7 A0A087WZV0;K7ENU7 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 RFS(0.996)IS(0.004)FAR 84.687 0.033387 0 832.8 945.32 1074.8 936.49 1135.8 975.26 1035.8 1002 850.36 716.32 TRUE FALSE 761.9659868 883.7794962 1001.845571 1008.618622 1090.558681 1030.478378 966.7036719 993.2396196 938.757965 805.0631295 0.946467375 1.097776639 1.244431069 1.252844137 1.354625049 1.279996985 1.200779959 1.233741285 1.166067518 1 9.652958107 -4.939272241 2.340196588 1.233042559 0.923428902 0.470249116 0.088278606 0.325898105 2.799025074 0.022801436 0.182156864 1.15E-05 4.939272241 -0.309613657 RFS(ph)ISFAR ddPTM_A459_MK2206_30min_R2 1 RFSISFAR 8 1 A0A087WZV0;O43314;K7ENU7 A0A087WZV0;K7ENU7 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 RFS(0.998)IS(0.002)FAR 84.31 0.01892 1486600 4974.9 5710.3 5824.4 5566.3 6818.5 5981 5788.7 3895.3 5054.8 4628.1 TRUE FALSE 5355.782169 5426.734806 6018.582589 5111.515484 6550.77143 6208.611146 5028.636737 4404.429085 5494.457367 4477.085476 1.196265338 1.21211329 1.344308171 1.14170603 1.463177655 1.386752873 1.123194266 0.983771498 1.227239774 1 12.12834415 -7.417937469 5.786009915 1.074408365 1.289879589 0.473711684 0.107920655 0.211543385 9.734706669 0.046732119 0.031009259 3.82E-08 7.417937469 0.215471224 RFS(ph)LDER ddPTM_A459_MK2206_30min_R2 2 RFSLDER 7 1 Q7LBC6;Q7LBC6-2 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 RFS(1)LDER;RFS(1)LDER 72.096 0.031988 11636500 32337 34638 34553 42582 36927 36829 35805 27962 28179 31802 TRUE FALSE 34812.74558 32917.92729 35704.97977 39102.91439 35477.06044 38230.5534 31103.76049 31616.72941 30629.95848 30764.30334 1.131595447 1.070003989 1.160597702 1.271048265 1.153189137 1.242691992 1.011034124 1.027708284 0.995633093 1 14.9089697 -7.278994874 24.40520667 1.010902868 1.170100847 0.694780898 0.052889223 392.9382717 546250.2789 0.024006458 0.016230041 5.26E-08 7.278994874 0.159197978 RFS(ph)LDTDYR ddPTM_A459_MK2206_30min_R2 2 RFSLDTDYR 9 1 E9PP00;Q9C0D7;Q9C0D7-2 E9PP00 ZC3H12C Probable ribonuclease ZC3H12C 1 RFS(1)LDTDYR;RFS(1)LDTDYR 96.334 0.011077 4325500 25641 27303 27395 31263 29643 27346 28123 21714 26140 26051 TRUE FALSE 27604.09467 25947.17272 28308.33563 28708.71289 28479.06688 28386.67119 24430.41632 24552.09436 28413.60995 25200.958 1.095358941 1.02961057 1.123303948 1.139191331 1.13007874 1.126412384 0.969424111 0.974252421 1.127481342 1 14.62119096 -7.250900275 24.91703694 1.015643836 1.107002381 0.435270429 0.049938033 675.6024319 1597292.666 0.019916117 0.01525644 5.61E-08 7.250900275 0.091358545 RFS(ph)PSQVPIQTR ddPTM_A459_MK2206_30min_R2 2 RFSPSQVPIQTR 12 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 RFS(0.989)PS(0.011)QVPIQTR;RFS(0.994)PS(0.006)QVPIQTR 113.65 0.0030113 39174000 53655 62718 58980 64874 67842 61142 67905 50692 63731 61808 TRUE FALSE 57762.86805 59603.51532 60946.36376 59573.58668 65178.1822 63468.80165 58988.99193 57317.61845 69274.20718 59791.21002 0.966076252 0.996860831 1.019319792 0.996360279 1.09009639 1.061507229 0.98658301 0.958629511 1.158601861 1 15.86764579 -5.026144239 1.068450654 1.036193592 0.950265395 0.152648269 0.054471372 2.583779319 3.195841284 0.018003846 0.229752429 9.42E-06 5.026144239 -0.085928197 RFS(ph)TMARSGQDNRK ddPTM_A459_MK2206_30min_R1 1 RFSTMARSGQDNRK 14 3 E9PHY4;Q9NYM9;E9PQJ6 E9PHY4 BET1L BET1-like protein 1 RFS(0.5)T(0.5)MARSGQDNRK 71.98 0.026651 118270000 3728.7 3598.6 3574 3061.4 3864.4 3293.7 3795 3974.2 3280.9 2970.2 TRUE FALSE 3411.554485 3364.330486 3331.406838 3297.189558 3710.472765 3480.186448 3541.842474 3939.453988 3621.961296 3338.1708 1.021983203 1.007836533 0.997973752 0.987723444 1.111528735 1.042542954 1.061012958 1.180123554 1.085013773 1 11.70484206 -6.257504379 24.9819744 1.08621727 1.003740074 0.405450671 0.044806258 321.8848669 2043538.191 0.013555871 0.016860915 5.53E-07 6.257504379 -0.082477196 RFSEGTSADR ddPTM_A459_MK2206_30min_R1 1 RFSEGTSADR 10 1 P62333;A0A087X2I1;H0YJX2 P62333 PSMC6 26S protease regulatory subunit 10B 0 144.17 0.0013661 1787200 482.43 561.83 677.27 538.03 627.87 547.58 552.03 596.97 205.28 481.37 FALSE TRUE 441.3967952 525.2547649 631.2987994 579.4691638 602.8606084 578.5835064 515.2050859 591.7507542 226.6195906 541.0057498 0.815881893 0.970885735 1.166898503 1.071096128 1.114333089 1.069459071 0.952309816 1.093797533 0.418885734 1 9.079500117 -8.230359472 24.99856522 0.709442616 1.036965612 0.392023133 0.160492056 541.5526443 435589.4412 0.102306021 0.038659435 5.88E-09 8.230359472 0.327522995 RFSEGTSADR ddPTM_A459_MK2206_30min_R2 1 RFSEGTSADR 10 1 P62333;A0A087X2I1;H0YJX2 P62333 PSMC6 26S protease regulatory subunit 10B 0 116.84 0.0084035 1196500 5169 5583.7 5431.6 8319.3 7013 5374.9 6523.7 5451.3 6702.7 4557.9 FALSE TRUE 5564.742614 5306.421577 5612.686833 7639.586578 6737.634383 5579.445586 5667.130354 6163.803627 7285.68873 4409.176096 1.262082188 1.203495043 1.272955924 1.732656263 1.528093738 1.265416818 1.285303701 1.397949071 1.652392323 1 12.10629338 -11.64078447 2.643903519 0.186663991 1.396673697 0.32721881 0.172023184 47400098.13 39440382.64 226009839.6 0.048731481 2.29E-12 11.64078447 1.210009706 RFSFCCS(ph)PEPEAEAEAAAGPGPCER ddPTM_A459_MK2206_30min_R2 1 RFSFCCSPEPEAEAEAAAGPGPCER 25 1 Q13501;E7EMC7;E3W990;D6RBF1;C9J6J8 Q13501 SQSTM1 Sequestosome-1 1 RFS(0.09)FCCS(0.91)PEPEAEAEAAAGPGPCER 69.913 0.00064153 53545000 22036 26466 33885 31292 27173 31801 32511 24476 30120 34798 TRUE FALSE 23723.0931 25151.73693 35014.70899 28735.3435 26106.05149 33011.20934 28242.26665 27675.09724 32739.78316 33662.54411 0.704732626 0.747172788 1.040168232 0.853629583 0.775522236 0.980651053 0.838981943 0.822133263 0.972587902 1 15.03885659 -5.072152963 9.272683812 0.897185759 0.715169863 0.436552826 0.083365959 0.35291654 43.40363996 0.020695623 0.055203809 8.47E-06 5.072152963 -0.182015897 RFTDEESR ddPTM_A459_MK2206_30min_R2 1 RFTDEESR 8 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;H0YF00;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 0 117.01 0.012269 2392100 6826.3 11388 11115 11076 11071 11238 11516 9960.9 11548 9120.8 FALSE TRUE 7348.926777 10822.48848 11485.56855 10171.05537 10636.29691 11665.66996 10003.93537 11262.82383 12552.42417 8823.189043 0.832910498 1.22659601 1.301747984 1.152764077 1.205493486 1.322160265 1.133823079 1.276502609 1.422662952 1 13.10708448 -4.761751741 7.15456263 1.235434712 0.825053888 0.53243562 0.110519722 0.078097955 24.72708551 0.025964953 0.155866692 1.73E-05 4.761751741 -0.410380825 RFVEVGR ddPTM_A459_MK2206_30min_R1 1 RFVEVGR 7 1 P50914;E7EPB3 P50914 RPL14 60S ribosomal protein L14 0 93.195 0.035215 8763500 2513.8 2652.5 2808.4 2636.3 2744.9 2751.7 2356.3 2569.3 2118.6 1841.2 FALSE TRUE 2299.98811 2479.821768 2617.773633 2839.348283 2635.564821 2907.498876 2199.115526 2546.836881 2338.836051 2069.301756 1.111480287 1.198385765 1.265051665 1.372128678 1.273649342 1.405062779 1.062733127 1.23077114 1.130253741 1 11.01492833 -8.439949176 0.880058046 1.004845115 1.260750712 0.395351013 0.096365468 0.635306719 1.094621401 0.095399836 0.033977026 3.63E-09 8.439949176 0.255905597 RGAAAADLLSS(ph)SPESQHGGTQSPGGGQPLLQPTK ddPTM_A459_MK2206_30min_R2 1 RGAAAADLLSSSPESQHGGTQSPGGGQPLLQPTK 34 1 Q9H3S7 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 1 RGAAAADLLS(0.128)S(0.424)S(0.335)PES(0.102)QHGGT(0.008)QS(0.003)PGGGQPLLQPTK 67.913 7.17E-05 11424000 17149 41252 28485 62948 66517 70433 53463 42415 53040 37327 TRUE FALSE 18461.94063 39203.48567 29434.67568 57804.94704 63905.20836 73113.37717 46443.24388 47958.78613 57653.32333 36109.02305 0.511283304 1.085697766 0.815161231 1.600844946 1.769785028 2.024795217 1.286194972 1.328166261 1.596645892 1 15.14007177 -5.759862069 24.99999999 1.55117665 0.832212299 0.547614451 0.294605554 31.39937554 497653.4926 0.082497611 0.13374714 1.74E-06 5.759862069 -0.718964351 RGAAAADLLSSSPESQHGGT(ph)QSPGGGQPLLQPTK ddPTM_A459_MK2206_30min_R2 1 RGAAAADLLSSSPESQHGGTQSPGGGQPLLQPTK 34 1 Q9H3S7 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 1 RGAAAADLLS(0.077)S(0.03)S(0.03)PES(0.035)QHGGT(0.455)QS(0.375)PGGGQPLLQPTK 57.919 0.00041264 9127700 7732.6 22040 15049 25384 25663 29792 25952 17468 22526 14971 TRUE FALSE 8324.613801 20945.52565 15550.72615 23310.046 24655.34167 30925.75544 22544.47123 19751.12758 24485.27076 14482.4975 0.574805126 1.446264752 1.073759975 1.609532196 1.702423334 2.135388281 1.556670128 1.363792922 1.690680131 1 13.8220228 -4.611857083 1.019593446 1.604823124 3.27E-12 0.434070865 0.31323154 2.409577117 1.614051336 0.101804318 4.588770732 2.44E-05 4.611857083 -1.604823124 RGAAGDWGER ddPTM_A459_MK2206_30min_R1 4 RGAAGDWGER 10 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 0 ;;; 135.8 0.0026058 18778900 8443.3 8353.3 8988.7 8326 10232.4 8146.1 9244.2 8606.7 5256.89 6098.36 FALSE TRUE 7725.152997 7809.498652 8378.572088 8967.269963 9824.821841 8607.325142 8627.536285 8531.452529 5803.362527 6853.870877 1.127122634 1.139428914 1.222458409 1.308351167 1.433470519 1.255834155 1.258783021 1.244764117 0.84672773 1 12.7427033 -8.252073711 24.42005589 0.923363867 1.252965517 0.686905189 0.087842381 254.9993001 664891.2777 0.067185479 0.024607827 5.60E-09 8.252073711 0.32960165 RGAAGDWGER ddPTM_A459_MK2206_30min_R2 1 RGAAGDWGER 10 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 0 97.452 0.027892 8249100 28025 32338 25900 30991 25605 22831 33819 24370 22327 25733 FALSE TRUE 30170.61555 30732.14194 26763.49307 28458.93616 24599.61905 23699.8497 29378.52468 27555.24267 24268.9621 24893.33432 1.211995756 1.234553056 1.075126889 1.143235205 0.988201047 0.952056057 1.18017636 1.106932576 0.974918096 1 14.60347186 -5.39580301 1.444577746 1.047658033 1.239774699 0.476629739 0.071573383 0.486485104 1.763044997 0.023081345 0.096198531 4.02E-06 5.39580301 0.192116667 RGADDDRPSWR ddPTM_A459_MK2206_30min_R1 3 RGADDDRPSWR 11 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;; 101.66 0.0095447 29632900 3981.52 3924.05 4289.9 3925.2 5308.5 4855.5 4527.9 4568.06 2339.42 1509.82 FALSE TRUE 3642.870816 3668.593632 3998.71354 4227.519584 5097.051204 5130.414214 4225.852053 4528.121933 2582.611081 1696.8679 2.146820513 2.16197951 2.356526127 2.491366348 3.00379965 3.023461174 2.490383637 2.668517645 1.521987115 1 10.72865854 -8.413704667 3.25919597 1.013431992 2.553093544 0.769212755 0.28690122 0.119251623 2.33721965 0.313944794 0.083841248 3.86E-09 8.413704667 1.539661552 RGAEDDRGPWR ddPTM_A459_MK2206_30min_R1 1 RGAEDDRGPWR 11 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 72.848 0.037677 13508000 1682.7 1612.4 1845.7 1987.2 2461.2 1868 1624.5 2065.4 1145.3 588.7 FALSE TRUE 1539.577529 1507.432467 1720.419026 2140.254488 2363.165192 1973.764546 1516.132569 2047.342426 1264.358033 661.6326005 2.326937227 2.278352768 2.600263387 3.23480809 3.571718187 2.983173055 2.291502214 3.094379606 1.910966951 1 9.369886512 -8.520608636 3.390820248 1.003191233 2.800866419 0.656245002 0.414427524 0.140833121 4.220776268 0.442783824 0.117122009 3.02E-09 8.520608636 1.797675186 RGAEDDRGPWR ddPTM_A459_MK2206_30min_R2 1 RGAEDDRGPWR 11 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 93.667 0.014763 8311000 10303 20711 14477 13988 22725 19445 19561 11874 25714 12578 FALSE TRUE 11091.8056 19682.52186 14959.65595 12845.13565 21832.70232 20184.9931 16992.6172 13425.97257 27950.55724 12167.58089 0.911586757 1.617619972 1.229468379 1.055685248 1.794333854 1.658915875 1.39654853 1.103421682 2.297133464 1 13.57075475 -6.253517668 24.96927284 1.545497317 1.23501211 0.158252472 0.379223667 1235.114109 3893082.799 0.108692731 0.137728549 5.58E-07 6.253517668 -0.310485207 RGAEEEEEEEDDDS(ph)GEEMK ddPTM_A459_MK2206_30min_R2 1 RGAEEEEEEEDDDSGEEMK 19 1 Q08495;Q08495-2;Q08495-3;Q08495-4;E5RFK4 Q08495 DMTN Dematin 1 RGAEEEEEEEDDDS(1)GEEMK 183.75 8.80E-14 22947000 39506 46065 47868 42208 39169 36966 48145 34874 32215 43078 TRUE FALSE 42530.60973 43777.47908 49463.89523 38759.47138 37631.02825 38372.76703 41823.50367 39432.15154 35017.00247 41672.36839 1.020594974 1.050515744 1.186971059 0.930100037 0.903021107 0.920820403 1.00362675 0.946242152 0.840293072 1 15.34680348 -5.79014812 24.99610013 0.93358414 1.082476103 0.577548523 0.059211131 143.8331487 125231.951 0.016804226 0.024929562 1.62E-06 5.79014812 0.148891963 RGAPS(ph)SPATGVLPSPQGK ddPTM_A459_MK2206_30min_R2 2 RGAPSSPATGVLPSPQGK 18 1 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 RGAPS(0.496)S(0.496)PAT(0.008)GVLPSPQGK;RGAPS(0.414)S(0.414)PAT(0.17)GVLPS(0.001)PQGK 85.518 0.0039039 18863000 55671 129715 84923 113108 138464 114079 126691 86599 137095 91385 TRUE FALSE 59933.21456 123273.5417 87754.29043 103866.7146 133027.2076 118420.3563 110056.3195 97917.78664 149019.2753 88403.11493 0.677953651 1.394447942 0.992660615 1.174921434 1.504779642 1.339549589 1.244937122 1.10762824 1.68567901 1 16.43180958 -4.754119869 24.86113614 1.271821489 0.677952528 0.42222167 0.208341434 234.5052697 796437.986 0.050137978 0.502234037 1.76E-05 4.754119869 -0.593868961 RGAPSSPATGVLPS(ph)PQGK ddPTM_A459_MK2206_30min_R2 2 RGAPSSPATGVLPSPQGK 18 1 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 RGAPSSPATGVLPS(1)PQGK;RGAPSSPAT(0.001)GVLPS(0.998)PQGK 71.148 0.011449 16184900 108538 164068 128287 153550 191502 166898 172561 117502 161663 135330 TRUE FALSE 116847.7527 155920.6217 132564.0246 141004.4738 183982.6693 173249.4203 149903.5334 132859.9148 175724.1555 130914.1932 0.892552212 1.191013884 1.012602387 1.077075529 1.405368393 1.323381492 1.145051807 1.014862572 1.342284983 1 16.99826199 -4.75911023 24.99972299 1.172289554 0.892551849 0.257671443 0.140063599 91.54106111 982330.9516 0.03595219 0.233501812 1.74E-05 4.75911023 -0.279737706 RGCFMYGNS(ph)FSDEST(ph)QVENMLYPK ddPTM_A459_MK2206_30min_R1 1 RGCFMYGNSFSDESTQVENMLYPK 24 1 Q8NDL9-3;Q8NDL9-2;Q8NDL9 Q8NDL9-3 AGBL5 Cytosolic carboxypeptidase-like protein 5 2 RGCFMY(0.126)GNS(0.671)FS(0.196)DES(0.012)T(0.967)QVENMLY(0.028)PK 60.419 0.011997 6636300 510.94 390.79 466.27 248.96 372.11 300.38 467.73 528.61 404.19 492.12 TRUE FALSE 467.4818699 365.3495 434.6208915 268.1349423 357.2880707 317.387256 436.5285851 523.9884185 446.2069969 553.0875409 0.845222203 0.660563605 0.785808501 0.484796569 0.645988283 0.573846331 0.789257672 0.947387854 0.806756551 1 9.111364033 -7.521159503 4.505012547 0.904612244 0.662447607 0.53857125 0.104485764 0.158968558 8.303258636 0.04944023 0.029528535 3.01E-08 7.521159503 -0.242164638 RGDDWNDR ddPTM_A459_MK2206_30min_R2 2 RGDDWNDR 8 1 C9JUL9;Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4 C9JUL9;Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 0 ; 164.46 0.00040727 16260500 72526 48593 52690 65535 50895 42407 54438 50406 44362 65860 FALSE TRUE 78078.64632 46179.94228 54446.6583 60180.58086 48896.60657 44020.8281 47290.22521 56994.23727 48220.52657 63710.99359 1.225512928 0.724834753 0.854588121 0.944587072 0.767475185 0.690945559 0.742261618 0.89457461 0.756863515 1 15.95925472 -4.753862263 24.95957946 0.813213229 1.225513678 0.612645977 0.096716866 178.1891981 586919.0694 0.023900702 0.246074834 1.76E-05 4.753862263 0.412300449 RGDDWNDREWDR ddPTM_A459_MK2206_30min_R1 3 RGDDWNDREWDR 12 2 C9JUL9;Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5 C9JUL9;Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 0 ;; 100.04 0.0087631 42635400 5275.3 3343.83 5722.7 4865 7054.9 5472.1 7372.2 4709.04 2786.71 2307.96 FALSE TRUE 4826.608033 3126.146059 5334.259068 5239.703143 6773.888394 5781.925573 6880.413989 4667.86936 3076.398477 2593.887509 1.860762279 1.205197237 2.056472785 2.020019421 2.611481173 2.22905795 2.652549105 1.799565071 1.186018463 1 11.3409002 -5.287688554 23.46321207 2.034934549 1.532979761 0.067972268 0.530495402 636.0339098 568527.6483 0.139389581 0.29036637 5.16E-06 5.287688554 -0.501954788 RGDDWNDREWDR ddPTM_A459_MK2206_30min_R2 1 RGDDWNDREWDR 12 2 C9JUL9;Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5 C9JUL9;Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 0 94.82 0.0118 12276000 18718 31005 15751 15841 22798 18138 19275 13095 20811 11709 FALSE TRUE 20151.06447 29465.33679 16276.13048 14546.73963 21902.83597 18828.2543 16744.16935 14806.56146 22621.10316 11326.93629 1.77903927 2.601350977 1.436940234 1.284260744 1.933694638 1.662254807 1.478261104 1.307199148 1.997106948 1 13.46747007 -1.522878745 0.060005771 0.250117147 4.584329796 0.28569557 0.365621944 451.5622159 2.032186358 29.78499928 171.2139614 0.03 1.522878745 4.334212649 RGDLPFVVPR ddPTM_A459_MK2206_30min_R1 1 RGDLPFVVPR 10 1 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 170.89 0.00025878 11089000 3244.1 3267.7 2995.3 3050.7 3831 3298.8 3250.4 2906.8 2658.7 2315.4 FALSE TRUE 2968.17226 3054.972136 2791.987381 3285.665443 3678.403158 3485.575205 3033.571747 2881.386154 2935.081379 2602.249232 1.140617979 1.173973691 1.072913135 1.262625194 1.4135476 1.339447107 1.165749886 1.107267558 1.127901718 1 11.34554343 -7.643183896 3.229812704 1.085176511 1.234284394 0.340888988 0.096216237 0.352328974 7.240859675 0.059423502 0.030918546 2.27E-08 7.643183896 0.149107883 RGDLPFVVPR ddPTM_A459_MK2206_30min_R2 2 RGDLPFVVPR 10 1 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 ; 180.97 0.00017582 19305700 45333 59453 50031 60662 57888 62784 61994 49219 56524 47974 FALSE TRUE 48803.72934 56500.65047 51699.00857 55705.72055 55615.02626 65173.28911 53854.11333 55652.09229 61440.35535 46408.61231 1.051609322 1.21746046 1.113996002 1.200331529 1.198377273 1.404336089 1.160433606 1.199175962 1.32389986 1 15.50210494 -4.759848972 24.52426969 1.210333847 1.051609082 0.155736823 0.103423279 57.27625689 882842.3637 0.024778197 0.15272281 1.74E-05 4.759848972 -0.158724765 RGDS(ph)ES(ph)EEDEQDSEEVR ddPTM_A459_MK2206_30min_R1 1 RGDSESEEDEQDSEEVR 17 1 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 2 RGDS(0.999)ES(0.957)EEDEQDS(0.044)EEVR 106.82 0.014941 0 218.56 412.38 250.54 205.12 209.45 192.9 260.84 292.24 147.75 212.58 TRUE FALSE 199.9703243 385.533987 233.5340428 220.9183779 201.107163 203.8218313 243.4398395 289.6849765 163.1091412 238.9160153 0.836990036 1.613679964 0.977473371 0.924669607 0.841748356 0.853110793 1.018934789 1.212497103 0.682704929 1 7.900359755 -5.488667231 24.71397886 0.939593412 1.242895529 0.219416185 0.216778254 692.3316037 500130.4781 0.053254324 0.110753278 3.25E-06 5.488667231 0.303302116 RGDS(ph)QECSPR ddPTM_A459_MK2206_30min_R2 1 RGDSQECSPR 10 1 Q13111;Q13111-3;Q13111-2 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 RGDS(1)QECSPR 96.334 0.039163 1249100 8544.5 8498.4 6109.4 9436.9 8171.8 6731.9 8717.3 11288 8946.4 7911.2 TRUE FALSE 9198.67349 8076.381814 6313.084347 8665.875083 7850.934072 6988.087172 7572.708039 12763.38036 9724.541701 7653.058192 1.201960479 1.055314309 0.824910015 1.13234146 1.025855792 0.913110419 0.989500909 1.667749028 1.270673952 1 12.90182065 -7.716249854 24.99996866 1.351909769 1.014634761 0.34762169 0.181067765 112.9725969 62499.09141 0.081467597 0.047035071 1.92E-08 7.716249854 -0.337275008 RGDSQECS(ph)PR ddPTM_A459_MK2206_30min_R2 1 RGDSQECSPR 10 1 Q13111;Q13111-3;Q13111-2 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 RGDS(0.109)QECS(0.891)PR 104.59 0.023393 1497300 6701.2 1232 2760.9 3544.8 5277.1 3510.2 6135.8 38227 17546 8606.3 TRUE FALSE 7214.249024 1170.820671 2852.947028 3255.178501 5069.894539 3643.783121 5330.16209 43223.40015 19072.11936 8325.477136 0.866526796 0.14063106 0.3426767 0.390990023 0.608961439 0.437666582 0.640223017 5.191702463 2.290813974 1 13.02331724 -7.633058603 10.25150199 3.052117436 0.455492797 0.539724412 0.983838916 0.204278528 17.81364165 0.428088897 0.246788608 2.33E-08 7.633058603 -2.59662464 RGDTWHDR ddPTM_A459_MK2206_30min_R2 1 RGDTWHDR 8 1 Q9UBU9-2;Q9UBU9;E9PMV7;E9PLA7;E9PIN3 Q9UBU9-2 NXF1 Nuclear RNA export factor 1 0 94.309 0.030904 574910 2957.9 2707.5 1820.7 2467.4 2125.9 2333.5 1044.9 3671.5 2657.7 2525.8 FALSE TRUE 3184.359098 2573.049487 1881.401229 2265.805527 2042.426484 2422.302978 907.7033749 4151.377656 2888.861942 2443.383353 1.30325808 1.053068273 0.769998382 0.927322978 0.835900958 0.991372465 0.371494458 1.699028379 1.182320383 1 11.25466452 -7.774680569 24.99999857 1.330505541 0.897496459 0.303905626 0.276093841 272.7819274 515017.7265 0.145611279 0.070598678 1.68E-08 7.774680569 -0.433009082 RGEAHLAVNDFELAR ddPTM_A459_MK2206_30min_R1 2 RGEAHLAVNDFELAR 15 1 Q02790 Q02790 FKBP4 "Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed" 0 ; 116.79 0.0014959 17358300 3263.6 2870.3 2851.1 2614.2 3320.3 2550.7 3202.6 3205 2284.6 1911.27 FALSE TRUE 2986.013682 2683.442948 2657.575276 2815.546137 3188.04542 2695.11843 2988.960397 3176.979023 2522.092346 2148.052557 1.390102711 1.249244549 1.237202166 1.310743598 1.484156153 1.254679929 1.391474519 1.479004325 1.174129719 1 11.06881358 -8.524538305 6.000760826 1.000094375 1.343413681 0.635128167 0.084758004 0.080404302 16.89067378 0.084418426 0.021881187 2.99E-09 8.524538305 0.343319306 RGEECPYR ddPTM_A459_MK2206_30min_R2 1 RGEECPYR 8 1 E5RJW4;Q9NW64-2;Q9NW64 E5RJW4 RBM22 Pre-mRNA-splicing factor RBM22 0 95.358 0.029701 3372600 7940.4 9216.6 6935.8 9290.6 7567.3 7182.5 9170.6 7115.5 5127.9 9591.4 FALSE TRUE 8548.323129 8758.917046 7167.03611 8531.528261 7270.169779 7455.835071 7966.489204 8045.520281 5573.915473 9278.433403 0.92131104 0.944008182 0.772440325 0.919500943 0.783555743 0.803566157 0.858602833 0.867120551 0.600738856 1 13.17966552 -5.247846867 24.06524479 0.823175802 0.932659642 0.157046993 0.098992778 828.5437241 1466907.375 0.023726998 0.061945553 5.65E-06 5.247846867 0.10948384 RGEEGHDPKEPEQLR ddPTM_A459_MK2206_30min_R2 2 RGEEGHDPKEPEQLR 15 2 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ; 78.401 0.016238 24919000 49974 74912 57970 70315 73266 54747 67999 56131 62468 63266 FALSE TRUE 53800.04786 71191.97901 59902.69087 64570.03957 70389.20871 56830.43545 59070.64962 63467.51443 67901.35372 61201.6356 0.879062256 1.163236543 0.97877598 1.05503781 1.150119732 0.92857707 0.965180898 1.037023174 1.109469593 1 15.90128259 -11.2742347 4.663332426 0.997805235 1.031688246 0.009393801 0.088940494 0.002084896 0.000111164 0.088467493 0.020075376 5.32E-12 11.2742347 0.033883011 RGEGDAPFSEPGT(ph)TSTQRPSSPETATK ddPTM_A459_MK2206_30min_R2 1 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFS(0.026)EPGT(0.43)T(0.09)S(0.069)T(0.069)QRPS(0.157)S(0.157)PET(0.001)ATK 67.827 0.0031514 8613800 10267 16056 15587 16722 13313 11798 15068 12832 12213 13980 TRUE FALSE 11053.04941 15258.68239 16106.6628 15355.75911 12790.26473 12246.98116 13089.5535 14509.18646 13275.26466 13523.83374 0.817301486 1.128280832 1.190983497 1.135459027 0.945757318 0.905585013 0.967887786 1.072860458 0.981619925 1 13.72321657 -6.268935872 24.90462435 0.978373237 1.081095633 0.151536364 0.101352101 982.9467141 3265511.508 0.032602597 0.037732487 5.38E-07 6.268935872 0.102722396 RGEGDAPFSEPGTT(ph)STQRPSSPETATK ddPTM_A459_MK2206_30min_R2 2 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFS(0.001)EPGT(0.053)T(0.182)S(0.182)T(0.182)QRPS(0.182)S(0.182)PET(0.031)AT(0.006)K;RGEGDAPFSEPGT(0.021)T(0.693)S(0.052)T(0.052)QRPS(0.09)S(0.09)PET(0.002)ATK 90.601 3.60E-05 698020000 915930 1136330 1036140 1101640 1083830 921020 1285640 960340 826950 979540 TRUE FALSE 986054.305 1079901.505 1070684.39 1011632.488 1041273.388 956070.0615 1116833.924 1085859.735 898876.6162 947577.69 1.040605235 1.139644291 1.129917263 1.067598466 1.098879173 1.00896219 1.178619901 1.145932145 0.948604664 1 19.85388471 -8.266497607 24.9982334 0.974302317 1.101803243 0.508442441 0.049934379 367.956458 1818441.135 0.043702465 0.012602516 5.41E-09 8.266497607 0.127500926 RGEGDAPFSEPGTTS(ph)TQRPSSPETATK ddPTM_A459_MK2206_30min_R1 1 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFS(0.048)EPGT(0.038)T(0.092)S(0.314)T(0.158)QRPS(0.158)S(0.158)PET(0.029)AT(0.004)K 56.972 0.0090804 36000000 1353.1 1555.4 1448.7 1484.4 1379.8 1379.6 1768.1 1845.6 1951.7 1598 TRUE FALSE 1238.01174 1454.143177 1350.36628 1598.728745 1324.839644 1457.71176 1650.153275 1829.464114 2154.586199 1795.972304 0.689326743 0.809669043 0.751885916 0.890174498 0.737672647 0.811656035 0.918807752 1.018648288 1.19967674 1 10.81054939 -7.611331799 1.797697556 1.100372924 0.782426724 0.788649779 0.068187866 0.152894826 0.967810949 0.043770564 0.02008502 2.45E-08 7.611331799 -0.3179462 RGEGDAPFSEPGTTS(ph)TQRPSSPETATK ddPTM_A459_MK2206_30min_R2 1 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFS(0.002)EPGT(0.115)T(0.115)S(0.191)T(0.191)QRPS(0.191)S(0.191)PET(0.006)ATK 57.735 0.0082745 10626000 13283 14809 13631 12024 13063 9803.5 14821 11825 12892 14865 TRUE FALSE 14299.95669 14073.60659 14085.45074 11041.60074 12550.08098 10176.57906 12874.9849 13370.5681 14013.32286 14379.95627 0.99443673 0.978696064 0.97951972 0.767846615 0.872748202 0.707691934 0.895342424 0.929805895 0.974503858 1 13.81177167 -10.86446715 14.7685225 0.999999999 0.895100728 0.095210106 0.091272697 6.56E-11 0 0.095656678 0.023200152 1.37E-11 10.86446715 -0.104899272 RGEGDAPFSEPGTTST(ph)QRPSSPETATK ddPTM_A459_MK2206_30min_R1 1 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFSEPGT(0.105)T(0.356)S(0.136)T(0.361)QRPS(0.021)S(0.021)PETATK 93.104 1.47E-05 446380000 4734 4936.6 5001.3 4309.4 4682.3 4098 5315.2 4532.5 4403.2 4312.1 TRUE FALSE 4331.348441 4615.226443 4661.82569 4641.310735 4495.794076 4330.025219 4960.632706 4492.87283 4860.928397 4846.315503 0.8937405 0.952316546 0.961931944 0.95769884 0.927672594 0.893467463 1.023588477 0.927069818 1.003015259 1 12.24267261 -7.930011337 0.893248186 0.999609427 0.937126806 0.300730571 0.03562961 0.788359969 1.183128915 0.032382454 0.012901407 1.17E-08 7.930011337 -0.062482621 RGEGDAPFSEPGTTSTQRPS(ph)SPETATK ddPTM_A459_MK2206_30min_R1 5 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFS(0.005)EPGT(0.012)T(0.047)S(0.015)T(0.047)QRPS(0.434)S(0.434)PET(0.005)ATK;RGEGDAPFS(0.001)EPGT(0.006)T(0.048)S(0.026)T(0.026)QRPS(0.407)S(0.407)PET(0.053)AT(0.027)K;RGEGDAPFSEPGTTSTQRPS(0.499)S(0.499)PET(0.002)ATK;RGEGDAPFSEPGT(0.002)T(0.005)S(0.073)T(0.073)QRPS(0.415)S(0.415)PET(0.015)AT(0.002)K;RGEGDAPFS(0.001)EPGT(0.037)T(0.097)S(0.037)T(0.037)QRPS(0.388)S(0.388)PET(0.015)AT(0.001)K 119.69 9.12E-12 540057000 15115.4 16569.8 16506.9 12831.2 14929.7 12972.4 16323.5 14531.5 13767 14196.8 TRUE FALSE 13829.75586 15491.10301 15386.45762 13819.46125 14335.01843 13706.88608 15234.5891 14404.45263 15198.12892 15955.60676 0.866764646 0.970887741 0.964329207 0.866119443 0.89843142 0.859063919 0.954811016 0.902783131 0.952525914 1 13.96177585 -8.565056555 2.14627584 1.000194172 0.911666332 0.342196278 0.039156853 0.43149426 4.591967296 0.038478399 0.010630396 2.72E-09 8.565056555 -0.08852784 RGEGDAPFSEPGTTSTQRPS(ph)SPETATK ddPTM_A459_MK2206_30min_R2 3 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFS(0.006)EPGT(0.017)T(0.004)S(0.004)T(0.028)QRPS(0.463)S(0.463)PET(0.015)ATK;RGEGDAPFSEPGT(0.001)T(0.003)S(0.003)T(0.062)QRPS(0.464)S(0.464)PET(0.004)ATK;RGEGDAPFSEPGT(0.017)T(0.044)S(0.005)T(0.012)QRPS(0.458)S(0.458)PET(0.004)AT(0.002)K 83.247 8.82E-05 343853000 106101 127399 115453 115185 119082 103284 133158 100926 92402 127069 TRUE FALSE 114224.1741 121072.5509 119302.1454 105774.017 114406.2423 107214.545 115674.1946 114117.3747 100438.9589 122922.7489 0.929235435 0.984948286 0.9705457 0.860491796 0.930716595 0.872210766 0.941031629 0.928366602 0.817090081 1 16.90739241 -5.734750833 24.96811812 0.905085325 0.9639137 0.204754205 0.048991243 311.5474984 291461.6134 0.012505871 0.021652859 1.84E-06 5.734750833 0.058828376 RGEGDAPFSEPGTTSTQRPSS(ph)PETATK ddPTM_A459_MK2206_30min_R1 1 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFS(0.003)EPGT(0.065)T(0.065)S(0.065)T(0.093)QRPS(0.275)S(0.363)PET(0.048)AT(0.022)K 43.376 0.026645 22115000 2130.7 2322.7 2201.8 1841.9 2013.6 2031.1 2108.8 1964.2 1977 1746.3 TRUE FALSE 1949.472776 2171.491808 2052.347951 1983.763457 1933.394048 2146.099127 1968.1258 1947.027206 2182.516225 1962.644828 0.993288622 1.10641099 1.045705225 1.010760291 0.985096244 1.093472999 1.002792646 0.992042564 1.112028113 1 10.9385834 -5.532719661 23.13094466 1.027632624 1.056401869 0.034146566 0.047626679 233.9465102 549885.9686 0.012450165 0.021604861 2.93E-06 5.532719661 0.028769245 RGEPHVTR ddPTM_A459_MK2206_30min_R2 2 RGEPHVTR 8 1 P67775;P62714;H0YBN9;P67775-2 P67775 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform 0 ; 139.98 0.0032072 892950 1323.74 3364.5 1930.06 3310.8 4569.9 2990.73 3552.1 4076.5 5375.1 3284.2 FALSE TRUE 1425.086552 3197.423822 1994.407237 3040.297049 4390.462764 3104.544326 3085.705003 4609.312547 5842.616482 3177.036823 0.448558399 1.006416986 0.627757042 0.956959966 1.381936379 0.977182355 0.971252515 1.450821254 1.839014405 1 11.6334661 -5.905829016 0.516736989 1.385763968 0.492840047 0.457763178 0.280922635 1.542225949 0.687607694 0.217788534 0.740540197 1.24E-06 5.905829016 -0.892923921 RGESMQPNR ddPTM_A459_MK2206_30min_R1 1 RGESMQPNR 9 1 K7ENA8;O75821;K7EL20;K7EP16;K7ER90 K7ENA8 EIF3G Eukaryotic translation initiation factor 3 subunit G 0 99.815 0.02235 0 184.34 176.65 0 0 75.97 166.59 185.49 442.08 0 225.89 FALSE TRUE 168.660915 165.1500529 0 0 72.94395403 176.0221818 173.1163005 438.2149412 0 253.8749586 0.664346401 0.650517301 0 0 0.287322367 0.693342041 0.681895928 1.726105417 0 1 7.987974289 -6.987593143 2.415367823 0.910998652 0.303815262 0.239834076 0.446209497 0.403565997 4.739949612 0.184147538 0.14740831 1.03E-07 6.987593143 -0.60718339 RGESMQPNR ddPTM_A459_MK2206_30min_R2 3 RGESMQPNR 9 1 K7ENA8;O75821;K7EL20;K7EP16;K7ER90 K7ENA8 EIF3G Eukaryotic translation initiation factor 3 subunit G 0 ;; 117.53 0.010153 3630130 13461.25 14201.89 13504.67 12585.74 17245.5 12999.47 16680.97 13509.57 13926.44 14151.62 FALSE TRUE 14491.85365 13496.64479 13954.90896 11557.44478 16568.35502 13494.17394 14490.7386 15275.31718 15137.73658 13689.8538 1.058583522 0.985886701 1.019361431 0.844234347 1.2102653 0.985706213 1.058502071 1.115813025 1.105763203 1 13.74081942 -6.263406275 24.99999824 1.079408531 0.980674729 0.291740285 0.078022989 240.7218906 3059668.176 0.023143755 0.027586037 5.45E-07 6.263406275 -0.098733802 RGEVPAELR ddPTM_A459_MK2206_30min_R1 1 RGEVPAELR 9 1 Q9UNZ2-4;Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-6 Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 0 134.57 0.0038286 0 1941.6 2038.7 1755.8 1705.7 1706.5 2006.3 2115.9 1390.6 1737.9 1853.3 FALSE TRUE 1776.456724 1905.980259 1636.621188 1837.07331 1638.526491 2119.894972 1974.752172 1378.442131 1918.560924 2082.900796 0.8528763 0.915060508 0.785741304 0.881978303 0.78665604 1.017760892 0.94807788 0.661789622 0.921100481 1 11.02437841 RGEVPAELR ddPTM_A459_MK2206_30min_R2 1 RGEVPAELR 9 1 Q9UNZ2-4;Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-6 Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 0 97.813 0.027407 2895000 27229 24407 21265 30675 26804 22308 32124 26271 24769 29800 FALSE TRUE 29313.67318 23194.98387 21973.96449 28168.75438 25751.54028 23156.94657 27906.08021 29704.7099 26923.36285 28827.62844 1.016860379 0.804609506 0.762253632 0.977144354 0.893293749 0.803290032 0.968032465 1.03042503 0.933943037 1 14.81516454 -7.421395437 6.812615187 0.989049045 0.873439398 0.32032166 0.076572118 0.29908841 17.26143387 0.032625321 0.021807731 3.79E-08 7.421395437 -0.115609647 RGFEGSCS(ph)QK ddPTM_A459_MK2206_30min_R1 1 RGFEGSCSQK 10 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 RGFEGS(0.068)CS(0.932)QK 99.539 0.033017 2969900 1969.8 2221.3 2301.7 1910.2 1717.6 1693.1 1917.9 1564.9 1453.5 2293.7 TRUE FALSE 1802.258166 2076.692966 2145.467017 2057.323935 1649.184355 1788.961859 1789.96039 1551.218244 1604.596526 2577.860873 0.699129338 0.805587683 0.832266411 0.798074076 0.639749171 0.693971454 0.694358803 0.601746301 0.622452726 1 11.33195869 -6.247134463 24.12472003 0.687345596 0.788787628 0.080513515 0.110429663 915.6359424 1544184.266 0.030840112 0.039607117 5.66E-07 6.247134463 0.101442032 RGFS(ph)DSGGGPPAK ddPTM_A459_MK2206_30min_R1 1 RGFSDSGGGPPAK 13 1 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 RGFS(0.995)DS(0.005)GGGPPAK 93.909 0.029605 6026200 1684.6 1812.9 1745.4 1624.5 1807.9 1274.8 1679.3 1692.1 1260.2 1336.1 TRUE FALSE 1541.315924 1694.87988 1626.927111 1749.619271 1735.887515 1346.978074 1567.276961 1677.306148 1391.2023 1501.626155 1.026431192 1.128696297 1.083443509 1.165149705 1.156005114 0.897012928 1.043719807 1.116993163 0.926463817 1 10.55230997 -6.735250941 24.99998685 1.007080035 1.114248173 0.418330666 0.067298881 242.958105 231931.9957 0.022341033 0.022334525 1.84E-07 6.735250941 0.107168138 RGFS(ph)DSGGGPPAK ddPTM_A459_MK2206_30min_R2 2 RGFSDSGGGPPAK 13 1 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 RGFS(0.879)DS(0.121)GGGPPAK;RGFS(0.998)DS(0.002)GGGPPAK 119.77 0.0056812 11882800 17360.5 25221.4 25931.6 33415 31878 23414.7 33428 30252 25857 27643 TRUE FALSE 18689.63323 23968.94195 26796.1466 30684.88761 30626.30955 24305.76282 29038.86345 34206.04027 28105.99512 26741.01117 0.698912734 0.89633641 1.00206183 1.147484192 1.145293622 0.908932077 1.085929895 1.279160315 1.05104459 1 14.7067664 -4.913051491 1.408339146 1.094437972 0.598353104 0.627207542 0.0937673 0.637325263 1.381535839 0.02873775 0.420698589 1.22E-05 4.913051491 -0.496084868 RGFSDS(ph)GGGPPAK ddPTM_A459_MK2206_30min_R1 1 RGFSDSGGGPPAK 13 1 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 RGFS(0.433)DS(0.567)GGGPPAK 96.371 0.025567 7373200 3331.9 2829 4007.6 2559.8 3421.3 2659 2823.7 3329.8 2198.7 1910.7 TRUE FALSE 3048.504408 2644.831586 3735.575278 2756.95624 3285.022376 2809.550282 2635.336125 3300.68791 2427.262733 2147.411941 1.41961789 1.231636807 1.739570879 1.283850661 1.529758829 1.308342488 1.227214991 1.537053905 1.130320032 1 11.06838326 -8.731297663 0.714860758 0.990016417 1.423208124 0.40014854 0.160419436 1.010795839 1.078455417 0.15634108 0.058146066 1.86E-09 8.731297663 0.433191706 RGGADVNIR ddPTM_A459_MK2206_30min_R2 3 RGGADVNIR 9 1 P08621;P08621-4;P08621-2 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 0 ;; 169.41 0.00095224 4703530 19816.2 36559.2 26805 37984.8 35148.6 37920.5 32230.1 27865.7 36651.4 25547.9 FALSE TRUE 21333.34351 34743.72329 27698.66532 34881.32033 33768.48936 39363.5912 27998.24915 31507.84267 39839.27252 24714.27412 0.863199275 1.405816053 1.12075577 1.411383566 1.366355702 1.592747212 1.132877665 1.274884406 1.611994442 1 14.59305691 -4.755990288 24.98903073 1.332795284 0.863198529 0.34781681 0.18899626 189.2309291 867703.1011 0.044770498 0.376908873 1.75E-05 4.755990288 -0.469596755 RGGDGYDGGYGGFDDYGGYNNYGYGNDGFDDR ddPTM_A459_MK2206_30min_R1 1 RGGDGYDGGYGGFDDYGGYNNYGYGNDGFDDR 32 1 P31942;P31942-4;P31942-3;P31942-5 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 0 184.31 5.19E-35 10630000 559.8 388.06 1007.8 620.52 771.89 598.01 920.74 573.98 220.81 247.57 FALSE TRUE 512.1860704 362.7972235 939.3933439 668.3125579 741.1439868 631.8688094 859.3191146 568.9617534 243.7639897 278.2408407 1.840801189 1.303896375 3.376187844 2.401921143 2.663677931 2.270941994 3.088400368 2.044853487 0.876089898 1 8.120190386 -8.171666656 3.953082325 0.928844578 2.424674042 0.525605947 0.553325053 0.183657113 5.038078106 0.444445529 0.148179183 6.73E-09 8.171666656 1.495829463 RGGGSGGGEES(ph)EGEEVDED ddPTM_A459_MK2206_30min_R1 2 RGGGSGGGEESEGEEVDED 19 1 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 RGGGSGGGEES(1)EGEEVDED;RGGGS(0.005)GGGEES(0.995)EGEEVDED 119.04 0.00080239 52198000 3659.86 3910.85 3866.32 3059.67 3576.87 3128.04 3739.91 3997.2 2780.14 2626.85 TRUE FALSE 3348.569688 3656.252954 3603.884971 3295.326314 3434.395694 3305.146922 3490.427428 3962.252902 3069.145502 2952.28401 1.134230202 1.238448924 1.220710798 1.116195563 1.163301255 1.119522008 1.182280369 1.342097471 1.039583418 1 11.5276158 -8.498107434 23.00864573 0.99999994 1.186640651 0.534565976 0.063866824 171.7816343 159557.8509 0.06222735 0.016067033 3.18E-09 8.498107434 0.186640711 RGGGSGGGEES(ph)EGEEVDED ddPTM_A459_MK2206_30min_R2 1 RGGGSGGGEESEGEEVDED 19 1 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 RGGGSGGGEES(1)EGEEVDED 91.065 0.0045871 1903400 3853.1 5285.9 3512 4503.2 5246.8 4223 5369.7 4047.1 3730.8 5381.8 TRUE FALSE 4148.096299 5023.409892 3629.088327 4135.274155 5040.784269 4383.709224 4664.65194 4576.069866 4055.29824 5206.192307 0.79676202 0.964891344 0.697071509 0.794299156 0.968228596 0.842018305 0.89598149 0.878966737 0.778937465 1 12.34601289 -6.213744434 24.99570593 0.88546837 0.815788194 0.177264477 0.083967539 837.3455821 438830.9229 0.024456453 0.031573078 6.11E-07 6.213744434 -0.069680176 RGGIPAS(ph)PIDPFQSR ddPTM_A459_MK2206_30min_R1 2 RGGIPASPIDPFQSR 15 1 Q96LD4-2;Q96LD4 Q96LD4-2 TRIM47 Tripartite motif-containing protein 47 1 RGGIPAS(1)PIDPFQSR;RGGIPAS(1)PIDPFQSR 99.409 0.0042373 48173000 9380.9 8465.7 8396.8 7837.6 8546 6692.6 6852.7 7792.2 5897.3 4073.3 TRUE FALSE 8583.005194 7914.581391 7826.848611 8441.25331 8205.594724 7071.529228 6395.568886 7724.073617 6510.345439 4577.931156 1.874865502 1.728855486 1.7096912 1.843901322 1.792424229 1.544699775 1.397043483 1.687241104 1.422115191 1 12.16048005 -10.83687388 0.153190282 0.217906384 2.001750138 0.836151647 0.102738491 12.85280203 0.363895513 4.555439442 0.687072089 1.46E-11 10.83687388 1.783843753 RGGIPAS(ph)PIDPFQSR ddPTM_A459_MK2206_30min_R2 2 RGGIPASPIDPFQSR 15 1 Q96LD4-2;Q96LD4 Q96LD4-2 TRIM47 Tripartite motif-containing protein 47 1 RGGIPAS(0.999)PIDPFQS(0.001)R;RGGIPAS(1)PIDPFQSR 90.765 0.0078176 32891900 53068 111001 76964 93793 91008 88809 73496 57869 86217 63799 TRUE FALSE 57130.92688 105488.8518 79529.94135 86129.81187 87434.56864 92188.68873 63845.88692 65432.67699 93715.99882 61717.24385 0.925688241 1.70922817 1.288617838 1.395555059 1.416695937 1.493726598 1.034490248 1.060200892 1.518473492 1 15.91338602 -7.258933625 24.96578512 1.1583079 1.386301478 0.178958129 0.227656403 369.107771 3677584.679 0.085262951 0.06295278 5.51E-08 7.258933625 0.227993579 RGGPNYQEGLR ddPTM_A459_MK2206_30min_R1 1 RGGPNYQEGLR 11 1 P53396;P53396-2;P53396-3;K7EIE7 P53396 ACLY ATP-citrate synthase 0 133.91 0.0023405 6625800 2717.8 2684.2 2512.4 2563.4 2857.9 2432.4 2738.5 2821.2 1834 1709 FALSE TRUE 2486.636838 2509.458092 2341.865288 2760.833512 2744.063791 2570.120386 2555.819662 2796.534546 2024.650863 1920.723822 1.294635288 1.306516878 1.219261854 1.437392237 1.428661299 1.338099916 1.330654429 1.455979518 1.054108269 1 10.90743438 -8.34631313 5.790579633 1.01087241 1.34944736 0.776149673 0.069758704 0.112325865 5.844545753 0.070128147 0.01830201 4.50E-09 8.34631313 0.338574949 RGHTASES(ph)DEQQWPEEK ddPTM_A459_MK2206_30min_R1 1 RGHTASESDEQQWPEEK 17 1 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 RGHT(0.13)AS(0.13)ES(0.74)DEQQWPEEK 62.684 0.026497 6464700 2682.9 2753.8 3188 2262.6 2614.3 2480.4 2808.1 2731 2056.5 2281.3 TRUE FALSE 2454.705267 2574.527119 2971.607442 2436.865844 2510.166895 2620.838104 2620.776773 2707.123155 2270.280534 2563.924667 0.957401478 1.004135243 1.159007314 0.950443621 0.979033014 1.022197781 1.02217386 1.055851285 0.885470842 1 11.32413816 -8.25169123 24.9858451 0.942735416 1.01959072 0.196317971 0.061527535 955.1569994 2448215.456 0.042560973 0.015653105 5.60E-09 8.25169123 0.076855304 RGILT(ph)LK ddPTM_A459_MK2206_30min_R2 1 RGILTLK 7 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;A5A3E0;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;P0CG38;P0CG39 P60709;P63261;P68133;P0CG38 ACTB;POTEE;POTEF;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2;POTEI;POTEJ "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member I;POTE ankyrin domain family member J" 1 RGILT(1)LK 88.496 0.040189 1905700 14048 19908 19751 19346 21013 16172 22311 18045 16437 15580 TRUE FALSE 15123.52568 18919.39767 20409.48848 17765.36992 20187.92404 16787.43679 19381.5389 20403.54346 17866.66055 15071.62588 1.003443544 1.255299052 1.354166342 1.178729492 1.339465576 1.113843784 1.285962049 1.353771891 1.18545011 1 13.87954744 -8.547217866 21.42127017 0.999999992 1.241272925 0.303236367 0.106747023 1066.927691 939021.6512 0.100126753 0.025852617 2.84E-09 8.547217866 0.241272932 RGILTLK ddPTM_A459_MK2206_30min_R1 2 RGILTLK 7 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;A5A3E0;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;P0CG38;P0CG39 P60709;P63261;P68133;P0CG38 ACTB;POTEE;POTEF;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2;POTEI;POTEJ "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member I;POTE ankyrin domain family member J" 0 ; 95.909 0.031777 47780000 26372.8 25737.4 27864.7 25332.3 28289.4 25193.8 24807.3 24806.3 20436.3 20068.1 FALSE TRUE 24129.65487 24061.89058 25973.3218 27283.39814 27162.57329 26620.25118 23152.45028 24589.42113 22560.72652 22554.28773 1.069847789 1.066843292 1.151591312 1.209676779 1.204319711 1.180274522 1.026521012 1.090232661 1.000285479 1 14.46111411 -7.268139973 24.43107761 1.036779167 1.14909506 0.556183747 0.051371963 360.2098526 1313356.853 0.023883243 0.016524061 5.39E-08 7.268139973 0.112315893 RGILTLK ddPTM_A459_MK2206_30min_R2 2 RGILTLK 7 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;A5A3E0;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;P0CG38;P0CG39 P60709;P63261;P68133;P0CG38 ACTB;POTEE;POTEF;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2;POTEI;POTEJ "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member I;POTE ankyrin domain family member J" 0 ; 95.909 0.031777 25848000 165843 208401 197491 203836 225875 212416 223736 180456 187248 186275 FALSE TRUE 178540.0676 198052.1094 204075.2514 187181.9468 217006.0126 220499.6397 194359.1944 204042.2188 203534.4926 180196.862 0.990805642 1.099087449 1.132512792 1.038763631 1.204271873 1.223659709 1.078593669 1.132329479 1.129511859 1 17.45921436 -3.804038633 1.196024743 1.127310854 3.65E-11 0.24443917 0.064570804 17.94687654 3.626851181 0.019070072 43.43240499 0.000157022 3.804038633 -1.127310854 RGLDDDRGPR ddPTM_A459_MK2206_30min_R1 1 RGLDDDRGPR 10 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 142.36 0.0048679 2546700 945.81 994.68 833.52 955.74 1102 968.9 1073.9 1059.7 552.35 512.22 FALSE TRUE 865.3638929 929.9261512 776.9429847 1029.35126 1058.105006 1023.758281 1002.26209 1050.435155 609.7687591 575.6776807 1.503209039 1.61535905 1.349614569 1.788068732 1.83801638 1.778353261 1.741012591 1.824693209 1.059219038 1 9.169117469 -8.271401281 23.79668614 1.029609125 1.680846834 0.756819389 0.147421208 204.7203085 489019.1188 0.147666746 0.040146063 5.35E-09 8.271401281 0.651237709 RGLDDDRGPR ddPTM_A459_MK2206_30min_R2 1 RGLDDDRGPR 10 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 109.44 0.040583 3279200 5714.6 9945.1 6395.1 9292.5 9491.2 12004 9493.8 8429.6 10240 7939.1 FALSE TRUE 6152.11417 9451.240796 6608.309442 8533.273025 9118.527799 12460.82063 8247.252656 9531.377663 11130.65669 7680.047817 0.801051545 1.23062265 0.860451601 1.111096341 1.187300915 1.622492584 1.073854337 1.241057073 1.449295233 1 12.90689958 -6.197819325 2.872887048 1.286832801 0.992554689 0.309607135 0.197297494 0.326779748 5.319397834 0.060229946 0.078904052 6.34E-07 6.197819325 -0.294278111 RGLDDDRGPWR ddPTM_A459_MK2206_30min_R2 1 RGLDDDRGPWR 11 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 67.704 0.046967 2627700 481.8 3736.3 2230.1 2467.1 3876.3 4404.1 4001.1 724.04 6814 2592 FALSE TRUE 518.6869784 3550.760775 2304.450421 2265.530038 3724.096985 4571.701112 3475.750764 818.674514 7406.669403 2507.423252 0.20686056 1.416099485 0.919051229 0.903529165 1.485228703 1.823266617 1.386184307 0.326500328 2.953896753 1 11.29198983 -4.756194168 0.614978895 1.464250668 2.73E-11 0.184616338 0.673666085 7.369333809 2.065151122 0.324670247 7.734381541 1.75E-05 4.756194168 -1.464250668 RGLDVNK ddPTM_A459_MK2206_30min_R2 1 RGLDVNK 7 1 Q9ULV4;Q9ULV4-2;Q9ULV4-3;H0YHL7;B4E3S0 Q9ULV4 CORO1C Coronin-1C;Coronin 0 87.696 0.044989 6131900 46995 57449 48871 55464 56512 50978 52835 48633 48637 51258 FALSE TRUE 50592.97333 54596.1662 50500.33475 50932.41378 54293.05493 52918.00351 45897.70103 54989.50008 52867.35834 49585.45566 1.020318814 1.101052022 1.018450553 1.027164379 1.094939115 1.067208172 0.9256283 1.108984466 1.066186801 1 15.59762939 RGLLYDS(ph)DEEDEERPAR ddPTM_A459_MK2206_30min_R1 3 RGLLYDSDEEDEERPAR 17 2 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR 105.52 0.0029914 101490000 2771.8 3093.4 2930.68 3010.38 3432.54 3378.33 2899.48 3159.05 2218.35 2136.63 TRUE FALSE 2536.043855 2892.019098 2731.753607 3242.239989 3295.814663 3569.608125 2706.06098 3131.430759 2448.955421 2401.331855 1.056098868 1.204339622 1.137599371 1.350184058 1.372494458 1.486511794 1.126900047 1.304039153 1.019832147 1 11.22961908 -8.269863333 22.73015387 1.009915815 1.25975105 0.387075233 0.123118967 214.1746458 577877.4427 0.117458897 0.032630904 5.37E-09 8.269863333 0.249835235 RGLLYDS(ph)DEEDEERPAR ddPTM_A459_MK2206_30min_R2 5 RGLLYDSDEEDEERPAR 17 2 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLY(0.029)DS(0.971)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR 160.03 0.00091886 241910800 119474.7 187438 152315 197387 217245 174901 193235 136844 160283 157307 TRUE FALSE 128621.7749 178130.1015 157393.1061 181259.8507 208714.8697 181556.9801 167863.0124 154729.9807 174224.1256 152174.0855 0.845227849 1.170567912 1.034296382 1.191134812 1.371553304 1.193087375 1.103098546 1.016795864 1.1449001 1 17.21536317 -4.758251755 24.9768461 1.143320923 0.845227434 0.41291766 0.103755223 94.10476729 737239.385 0.027560158 0.191999395 1.74E-05 4.758251755 -0.29809349 RGLNSSFETS(ph)PK ddPTM_A459_MK2206_30min_R2 1 RGLNSSFETSPK 12 1 M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63 M0QZ79 VRK3 Inactive serine/threonine-protein kinase VRK3 1 RGLNSSFET(0.127)S(0.873)PK 88.768 0.013705 9645300 29629 33427 42029 33184 28718 23085 34606 26615 26274 37733 TRUE FALSE 31897.41902 31767.06379 43430.22588 30472.76105 27590.38702 23963.51585 30062.19063 30093.67188 28559.26503 36501.7753 0.873859388 0.870288185 1.189811332 0.834829561 0.75586425 0.65650275 0.823581603 0.824444062 0.782407562 1 15.15567901 -5.979441874 24.99757595 0.791982818 0.974733873 0.303653328 0.115072727 268.681814 326700.2999 0.03209868 0.047604644 1.05E-06 5.979441874 0.182751055 RGMDDDRGPR ddPTM_A459_MK2206_30min_R1 1 RGMDDDRGPR 10 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 139.38 0.0061812 5582100 2070.1 1932.3 2135.2 1944.3 2043.6 1676.1 2183.8 2370.1 218.67 1040.1 FALSE TRUE 1894.027124 1806.506919 1990.268573 2094.050323 1962.199085 1770.999334 2038.122687 2349.378466 241.401529 1168.95544 1.620273159 1.545402721 1.702604312 1.791385925 1.678591858 1.515027239 1.743541812 2.009810113 0.206510463 1 10.19100422 -8.258879873 24.99983242 0.603255191 1.693215519 0.798446676 0.220553361 83.604037 816619.0686 0.156137374 0.052808196 5.51E-09 8.258879873 1.089960328 RGNDPLTS(ph)SPGR ddPTM_A459_MK2206_30min_R1 1 RGNDPLTSSPGR 12 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RGNDPLT(0.002)S(0.686)S(0.312)PGR 118.52 0.0023113 14087000 1855.7 1808.2 1829.4 1518.9 1905.9 1402.5 1712.6 1761.3 1784.4 1462.4 TRUE FALSE 1697.86297 1690.485851 1705.225425 1635.885941 1829.983967 1481.908338 1598.355579 1745.90114 1969.894766 1643.573153 1.03303158 1.028543116 1.037511122 0.995322866 1.113418021 0.901638199 0.97248825 1.062259466 1.198544015 1 10.68261995 -7.999197514 23.65242944 1.109648576 1.012751427 0.216136211 0.067530515 16.75228264 493777.0935 0.036467981 0.01723632 1.00E-08 7.999197514 -0.096897149 RGNDPLTS(ph)SPGR ddPTM_A459_MK2206_30min_R2 1 RGNDPLTSSPGR 12 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RGNDPLT(0.006)S(0.667)S(0.327)PGR 106.76 0.004501 103190000 18598 27827 18707 26114 28295 26358 27015 23917 20730 23664 TRUE FALSE 20021.87718 26445.15164 19330.68204 23980.40267 27183.99613 27361.07216 23467.89805 27043.03402 22533.05793 22891.84562 0.874629224 1.155221474 0.844435279 1.047552175 1.187496918 1.195232251 1.025164089 1.181339175 0.984326834 1 14.48254616 -4.74592863 24.58293918 1.073235133 0.874628553 0.227403119 0.107207835 1104.465346 1750343.946 0.027149465 0.63628646 1.80E-05 4.74592863 -0.19860658 RGNDPLTSS(ph)PGR ddPTM_A459_MK2206_30min_R1 5 RGNDPLTSSPGR 12 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RGNDPLTSS(1)PGR;RGNDPLTS(0.001)S(0.999)PGR;RGNDPLTS(0.099)S(0.901)PGR;RGNDPLTS(0.019)S(0.981)PGR;RGNDPLT(0.06)S(0.208)S(0.732)PGR 208.51 1.45E-05 724835000 33561.6 31073.88 32113.9 27709.97 33470.1 30125.25 33555.2 30102.6 26328.29 23828.86 TRUE FALSE 30707.00968 29050.96476 29934.09794 29844.19669 32136.91504 31830.91562 31316.79383 29839.41614 29065.20996 26780.95908 1.146598581 1.084761927 1.117738086 1.114381177 1.199991193 1.188565187 1.169367898 1.114202671 1.085293842 1 14.70892001 -10.78868499 6.132624463 0.999995699 1.136814995 0.531861809 0.038166998 2.49E-06 2.99E-07 0.041060423 0.009958302 1.63E-11 10.78868499 0.136819296 RGNDPLTSS(ph)PGR ddPTM_A459_MK2206_30min_R2 3 RGNDPLTSSPGR 12 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RGNDPLT(0.006)S(0.235)S(0.759)PGR;RGNDPLT(0.017)S(0.094)S(0.89)PGR;RGNDPLT(0.051)S(0.243)S(0.707)PGR 109.99 0.0038025 372242000 26515.9 38453.9 33628 35962.8 38007.8 33924 34268.4 26118.6 33310.2 29294.5 TRUE FALSE 28545.97769 36544.33524 34749.14074 33024.5242 36515.4228 35215.00159 29768.91792 29532.3907 36207.46098 28338.62286 1.00731704 1.28955932 1.226211341 1.165353883 1.288539072 1.24265042 1.050471579 1.042125118 1.27767186 1 14.79048203 -10.61504864 4.417997029 0.999984765 1.178664989 0.210600462 0.10253829 73798983.86 0.298386404 13083.85597 0.02512604 2.43E-11 10.61504864 0.178680224 RGPEVTSQGVQTS(ph)SPACK ddPTM_A459_MK2206_30min_R1 2 RGPEVTSQGVQTSSPACK 18 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB05;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQT(0.003)S(0.498)S(0.498)PACK;RGPEVTSQGVQT(0.135)S(0.433)S(0.433)PACK 194.94 5.00E-10 12833600 3184.3 3634.9 3666.6 3004.83 3468.3 2991.94 3359.6 3219.26 3522.73 4011.9 TRUE FALSE 2913.458564 3398.267349 3417.721408 3236.262527 3330.150267 3161.341057 3135.487214 3191.114349 3888.93039 4508.92446 0.646153776 0.753675822 0.757990389 0.717746007 0.738568653 0.701129745 0.695395818 0.707732937 0.862496239 1 12.13856762 -8.500256667 2.716596603 0.998940753 0.717095707 0.896058954 0.031206133 0.073955233 1.269832261 0.030525747 0.008231344 3.16E-09 8.500256667 -0.281845046 RGPEVTSQGVQTS(ph)SPACK ddPTM_A459_MK2206_30min_R2 1 RGPEVTSQGVQTSSPACK 18 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB05;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQT(0.001)S(0.826)S(0.173)PACK 102.15 0.0012172 11565000 74286 74631 79130 82934 72682 73372 81747 63849 54321 88750 TRUE FALSE 79973.39328 70924.93306 81768.15471 76158.02691 69828.13948 76164.22287 71013.5207 72194.28353 59045.74239 85854.09477 0.931503541 0.82611008 0.952408326 0.88706342 0.813334992 0.887135588 0.827141919 0.840895052 0.687745209 1 16.38959932 -6.142143035 5.748461103 0.836388334 0.899192732 0.109621251 0.078312361 0.497683467 21.53021167 0.02223821 0.028956011 7.21E-07 6.142143035 0.062804398 RGPEVTSQGVQTS(ph)SPACKQEK ddPTM_A459_MK2206_30min_R2 1 RGPEVTSQGVQTSSPACKQEK 21 2 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB05;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQT(0.026)S(0.487)S(0.487)PACKQEK 83.602 0.0005184 8410800 20621 37127 32014 39617 47663 34979 49597 32700 36463 26771 TRUE FALSE 22199.75961 35283.32717 33081.33078 36380.16437 45791.51113 36310.15036 43084.85432 36974.00228 39634.48583 25897.46446 0.857217495 1.362424002 1.277396512 1.404777075 1.768185113 1.402073566 1.663670758 1.427707424 1.530438854 1 14.66052323 -4.360687804 1.121438464 1.483196617 2.69E-12 0.416853817 0.199802134 3.356234434 1.859234323 0.057834445 7.375715634 4.36E-05 4.360687804 -1.483196617 RGPEVTSQGVQTSS(ph)PACK ddPTM_A459_MK2206_30min_R1 1 RGPEVTSQGVQTSSPACK 18 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB05;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQT(0.001)S(0.248)S(0.752)PACK 125.45 0.0014817 6896500 1274.1 1534.3 1397.9 1093.2 1104.4 1101.7 1454.1 1025.7 1253.6 1401.4 TRUE FALSE 1165.731104 1434.416791 1303.014443 1177.398453 1060.409409 1164.077302 1357.099642 1016.732413 1383.916206 1575.016012 0.740139208 0.910731561 0.827302347 0.747546974 0.673268971 0.739089186 0.861641807 0.645537826 0.878668023 1 10.62115078 -8.525261142 24.30653896 1.000000005 0.772486256 0.479115825 0.076686972 144.5278847 1474562.767 0.075897655 0.01959669 2.98E-09 8.525261142 -0.227513748 RGPEVTSQGVQTSS(ph)PACK ddPTM_A459_MK2206_30min_R2 3 RGPEVTSQGVQTSSPACK 18 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB05;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQT(0.005)S(0.083)S(0.912)PACK;RGPEVTSQGVQTS(0.069)S(0.931)PACK;RGPEVTSQGVQTS(0.012)S(0.987)PACK 112.57 0.0006298 148679000 219812 216888 210476 234495 211851 187204 237648 193610 172080 246513 TRUE FALSE 236640.9757 206117.6573 217493.1648 215336.0084 203532.6653 194328.1794 206444.5321 218915.4918 187047.2074 238469.301 0.992333079 0.864336233 0.912038421 0.902992576 0.853496297 0.814898096 0.865706954 0.918002824 0.784365982 1 17.86344403 -2.780186866 1.661950123 0.874014127 93.94448093 0.245593075 0.057209552 1451.585476 6.612386443 0.014603951 513964.209 0.001658873 2.780186866 93.07046681 RGPEVTSQGVQTSS(ph)PACKQEK ddPTM_A459_MK2206_30min_R2 1 RGPEVTSQGVQTSSPACKQEK 21 2 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4;F8W0B5;F8WB05;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQT(0.071)S(0.197)S(0.731)PACKQEK 72.302 0.0018469 7483400 19960 44913 30291 33557 44837 27947 43042 29924 33591 36712 TRUE FALSE 21488.15295 42682.68573 31300.88682 30815.28576 43076.47409 29010.54267 37390.5337 33835.16954 36512.68446 35514.09045 0.605059926 1.201852144 0.881365296 0.867691819 1.212940372 0.816874156 1.052836585 0.952725217 1.028118248 1 15.11610392 -4.740830056 24.9888695 0.99461389 0.605058511 0.472605233 0.125473569 1354.594315 1642365.066 0.029294972 1.262541803 1.82E-05 4.740830056 -0.389555379 RGPGLYYVDSEGNR ddPTM_A459_MK2206_30min_R1 2 RGPGLYYVDSEGNR 14 1 P28074;P28074-3 P28074 PSMB5 Proteasome subunit beta type-5 0 ; 138.21 0.00078559 13286500 3480.5 3619.9 3390 3062.3 3990.4 3381.9 3421.1 3665.3 3016.6 2924.6 FALSE TRUE 3184.465198 3384.243852 3159.896245 3298.158877 3831.453918 3573.380255 3192.884661 3633.254669 3330.186365 3286.921528 0.968829092 1.029608959 0.961354331 1.003418807 1.16566638 1.08715107 0.971390596 1.105367024 1.013162723 1 11.6825213 -6.024913733 24.9894865 1.06187306 0.989479916 0.257928446 0.055244592 989.1010493 992107.632 0.016231627 0.021060207 9.44E-07 6.024913733 -0.072393144 RGPGLYYVDSEGNR ddPTM_A459_MK2206_30min_R2 2 RGPGLYYVDSEGNR 14 1 P28074;P28074-3 P28074 PSMB5 Proteasome subunit beta type-5 0 ; 164.2 0.000355 16103700 32508 37189 34469 42858 37780 42525 43940 31260 38695 33661 FALSE TRUE 34996.83747 35342.24834 35618.17926 39356.3643 36296.56737 44143.31867 38170.62522 35345.78933 42060.62116 32562.64433 1.074754161 1.085361741 1.09383559 1.208635389 1.114668913 1.355642933 1.172221299 1.085470485 1.291683216 1 14.99093024 -5.706043645 6.66978499 1.18381806 1.083410943 0.157339559 0.095030678 0.34934832 32.12367853 0.024956217 0.043164985 1.97E-06 5.706043645 -0.100407117 RGPLSQNGSFGPSPVSGGECS(ph)PPLTVEPPVRPLSATLNR ddPTM_A459_MK2206_30min_R2 1 RGPLSQNGSFGPSPVSGGECSPPLTVEPPVRPLSATLNR 39 2 Q5JRA6-4;Q5JRA6-2;Q5JRA6 Q5JRA6-4 MIA3 Melanoma inhibitory activity protein 3 1 RGPLSQNGSFGPSPVS(0.093)GGECS(0.723)PPLT(0.093)VEPPVRPLS(0.046)AT(0.046)LNR 50.375 0.0017049 4964000 4531.7 4149.6 5224.6 3170.2 4523.5 6477.3 5261.5 3972.3 3538.6 5714.3 TRUE FALSE 4878.650436 3943.536898 5398.785556 2911.184519 4345.884661 6723.79819 4570.65873 4491.493249 3846.381032 5527.842859 0.882559537 0.713395261 0.976653225 0.526640245 0.786180934 1.216351181 0.826843101 0.812521876 0.695819532 1 12.43250089 -6.55630454 24.99997155 0.905361285 0.768787797 0.135423902 0.167993757 404.5085766 302539.2557 0.056276755 0.056277025 2.78E-07 6.55630454 -0.136573488 RGPNYTSGYGTNSELS(ph)NPS(ph)ETESER ddPTM_A459_MK2206_30min_R2 1 RGPNYTSGYGTNSELSNPSETESER 25 1 B4DXZ6;P51114-3;P51114;E7EU85;E9PFF5;P51114-2 B4DXZ6 FXR1 Fragile X mental retardation syndrome-related protein 1 2 RGPNYTSGYGTNS(0.019)ELS(0.962)NPS(0.746)ET(0.254)ES(0.019)ER 78.662 0.0005733 7431000 15387 14129 11165 11834 14345 7784.6 9643 11069 13346 15649 TRUE FALSE 16565.04055 13427.37441 11537.23553 10867.12434 13781.74322 8080.848408 8376.862517 12515.75631 14506.81096 15138.37441 1.0942417 0.886975975 0.762118522 0.717852792 0.910384619 0.533798953 0.553352843 0.826756953 0.958280629 1 13.88592267 -4.818241374 2.014188464 0.761161101 1.17613839 0.282606058 0.148171503 0.848895919 4.059829073 0.041208504 0.641990102 1.52E-05 4.818241374 0.41497729 RGPNYTSGYGTNSELSNPS(ph)ETESER ddPTM_A459_MK2206_30min_R1 4 RGPNYTSGYGTNSELSNPSETESER 25 1 B4DXZ6;P51114-3;P51114;E7EU85;E9PFF5;P51114-2 B4DXZ6 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RGPNYTSGYGTNS(0.001)ELS(0.002)NPS(0.889)ET(0.104)ES(0.004)ER;RGPNYTSGYGTNSELS(0.001)NPS(0.957)ET(0.041)ES(0.001)ER;RGPNYTSGYGTNSELSNPS(0.927)ET(0.07)ES(0.002)ER;RGPNYTSGYGTNSELS(0.003)NPS(0.869)ET(0.091)ES(0.037)ER 158.91 2.96E-13 132475000 5988.8 5727.8 6467.9 4762.2 6214.9 6207.4 7864.6 5884.6 6243.8 6889.5 TRUE FALSE 5479.421112 5354.919179 6028.876969 5128.985469 5967.347373 6558.857624 7339.966884 5833.151563 6892.865354 7743.023273 0.70765913 0.691579889 0.778620541 0.662400885 0.770674085 0.847066758 0.947945864 0.753342894 0.890203363 1 12.91868126 -6.690681358 2.823900914 0.87908814 0.713688233 0.622193914 0.065830041 0.188860723 3.06110294 0.023112218 0.022360727 2.04E-07 6.690681358 -0.165399907 RGPNYTSGYGTNSELSNPS(ph)ETESER ddPTM_A459_MK2206_30min_R2 6 RGPNYTSGYGTNSELSNPSETESER 25 1 B4DXZ6;P51114-3;P51114;E7EU85;E9PFF5;P51114-2 B4DXZ6 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RGPNYTSGYGTNSELS(0.006)NPS(0.881)ET(0.101)ES(0.012)ER;RGPNYTSGYGTNS(0.004)ELS(0.225)NPS(0.467)ET(0.225)ES(0.08)ER;RGPNYTSGYGTNSELSNPS(0.957)ET(0.042)ES(0.001)ER;RGPNYTSGYGTNSELS(0.097)NPS(0.79)ET(0.102)ES(0.01)ER;RGPNYTSGYGTNSELS(0.001)NPS(0.916)ET(0.081)ES(0.002)ER;RGPNYTSGYGTNSELSNPS(0.935)ET(0.058)ES(0.007)ER 186.42 1.03E-26 154844600 90718.1 101300.8 97781.3 123712.8 106391.8 118388.2 122790.5 82604.6 109784.4 121378.7 TRUE FALSE 97663.54749 96270.34958 101041.2797 113605.0685 102214.3234 122893.5459 106667.9599 93401.30484 119333.2487 117418.123 0.831758719 0.819893447 0.860525421 0.967525844 0.870515733 1.046631839 0.908445453 0.795459019 1.016310308 1 16.84129557 -5.600183035 4.714256204 0.934577483 0.828592551 0.327248271 0.069944588 0.252540421 10.29849113 0.019077056 0.034344974 2.51E-06 5.600183035 -0.105984932 RGQS(ph)PLPR ddPTM_A459_MK2206_30min_R1 1 RGQSPLPR 8 1 H3BTS1;H3BN52;Q9BQ65-3;Q9BQ65-2;Q9BQ65 H3BTS1 USB1 U6 snRNA phosphodiesterase 1 RGQS(1)PLPR 78.342 0.02629 7674500 1286.8 1591 1494.8 1255 1728.8 1502.6 1452.2 1513.2 982.32 1281.6 TRUE FALSE 1177.350903 1487.425611 1393.337141 1351.660317 1659.938235 1587.675913 1355.326388 1499.970252 1084.435679 1440.374284 0.817392338 1.032666042 0.967343805 0.938409088 1.152435346 1.102266218 0.940954308 1.041375335 0.752884644 1 10.49222803 -8.232930095 24.97856657 0.87644219 1.003753412 0.180023751 0.104338475 996.0058801 872658.7311 0.069501677 0.026258971 5.85E-09 8.232930095 0.127311222 RGQS(ph)PLPR ddPTM_A459_MK2206_30min_R2 3 RGQSPLPR 8 1 H3BTS1;H3BN52;Q9BQ65-3;Q9BQ65-2;Q9BQ65 H3BTS1 USB1 U6 snRNA phosphodiesterase 1 RGQS(1)PLPR;RGQS(1)PLPR;RGQS(1)PLPR 97.452 0.0104 46695800 18886.9 30168.5 24384.4 27241.5 30767 30559.2 28900.1 25403.8 25258.7 25643.8 TRUE FALSE 20332.89559 28670.37616 25197.36373 25015.78231 29558.93299 31722.15177 25105.48215 28724.16388 27455.65607 24807.04491 0.819641987 1.155735246 1.015734192 1.00841444 1.191553976 1.278755768 1.012030343 1.15790349 1.106768508 1 14.59846227 -4.755574713 24.95589537 1.107658759 0.819641511 0.473320233 0.089545549 169.8786407 722810.1571 0.022747373 0.198697688 1.76E-05 4.755574713 -0.288017248 RGQS(ph)SPPPAPPICLR ddPTM_A459_MK2206_30min_R1 4 RGQSSPPPAPPICLR 15 1 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 RGQS(0.612)S(0.388)PPPAPPICLR;RGQS(0.886)S(0.114)PPPAPPICLR;RGQS(0.773)S(0.227)PPPAPPICLR;RGQS(0.529)S(0.471)PPPAPPICLR 179.55 3.59E-05 53996400 10297.6 10340.6 10408.5 9377.8 11198.7 9513.3 9302.2 8943 7593.9 7026.03 TRUE FALSE 9421.735045 9667.425061 9702.00002 10100.07978 10752.63207 10051.93482 8681.667211 8864.812294 8383.31308 7896.46764 1.193158191 1.224272105 1.22865064 1.279063024 1.36170153 1.272966 1.099436812 1.122630105 1.061653572 1 12.94699172 -7.306874832 4.658407587 1.077751592 1.262718776 0.766276821 0.051156551 0.117172073 5.848474787 0.023920032 0.016165916 4.93E-08 7.306874832 0.184967184 RGQS(ph)SPPPAPPICLR ddPTM_A459_MK2206_30min_R2 5 RGQSSPPPAPPICLR 15 1 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 RGQS(0.603)S(0.397)PPPAPPICLR;RGQS(0.761)S(0.239)PPPAPPICLR;RGQS(0.5)S(0.5)PPPAPPICLR;RGQS(0.946)S(0.054)PPPAPPICLR;RGQS(0.958)S(0.042)PPPAPPICLR 145.79 0.00063915 92235800 71045.7 110882 99828.6 117470.3 108952 104901 108266 91965 102091 105013.9 TRUE FALSE 76485.01342 105375.7611 103156.8357 107872.6007 104673.997 108893.0811 94050.54415 103985.1413 110970.6906 101587.305 0.752899325 1.037292613 1.015450067 1.061870877 1.030384623 1.07191623 0.925810012 1.023603699 1.092367699 1 16.6323606 -4.760302422 24.99797518 1.028285109 0.752898997 0.785394682 0.043256967 12.68826536 278851.0908 0.010753195 0.064259378 1.74E-05 4.760302422 -0.275386112 RGQSS(ph)PPPAPPICLR ddPTM_A459_MK2206_30min_R1 1 RGQSSPPPAPPICLR 15 1 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 RGQS(0.323)S(0.677)PPPAPPICLR 111.88 0.0056499 12710000 4230.8 4490.9 4551.9 4485.7 4618.6 4443.5 4381.9 4435.7 3395.7 2651.5 TRUE FALSE 3870.948243 4198.541594 4242.92971 4831.189391 4434.631382 4695.08713 4089.591446 4396.919143 3748.695167 2979.987838 1.298981222 1.408912325 1.423807727 1.62121111 1.48813741 1.575539024 1.372351724 1.475482244 1.257956532 1 11.54109073 -8.571603817 1.984142809 0.999776948 1.465472313 0.721018396 0.089074863 0.206031137 1.841609468 0.088979266 0.024853555 2.68E-09 8.571603817 0.465695366 RGS(ph)ASGSEPAGDSDR ddPTM_A459_MK2206_30min_R1 1 RGSASGSEPAGDSDR 15 1 A0A0C4DG27;P50747 A0A0C4DG27 HLCS Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase 1 RGS(0.973)AS(0.027)GSEPAGDSDR 199.33 4.03E-05 5298300 314.67 484.65 297.69 337.06 183.92 149.87 236.68 229.79 56.426 182.4 TRUE FALSE 287.9056641 453.0991969 277.4836322 363.0204196 176.5940769 158.3555099 220.891509 227.7809703 62.29168462 204.997089 1.404437816 2.21027137 1.353597914 1.770856461 0.861446754 0.772476871 1.077534857 1.111142462 0.303866191 1 7.679459613 -6.264248439 24.81581886 0.867027747 1.698668592 0.642385633 0.303364939 138.6136494 1224539.975 0.08934839 0.105878805 5.44E-07 6.264248439 0.831640845 RGS(ph)ASGSEPAGDSDR ddPTM_A459_MK2206_30min_R2 3 RGSASGSEPAGDSDR 15 1 A0A0C4DG27;P50747 A0A0C4DG27 HLCS Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase 1 RGS(0.998)AS(0.002)GSEPAGDSDR;RGS(0.998)AS(0.001)GSEPAGDSDR;RGS(0.964)AS(0.025)GS(0.01)EPAGDSDR 186.17 3.98E-05 44815880 54439.19 64180 53366.25 57098.3 52950 46136.2 51089.9 44335.76 43997.1 40070.51 TRUE FALSE 58607.09624 60992.91453 55145.45414 52433.18624 50870.91695 47891.94542 44381.73476 50130.59606 47823.88823 38763.01254 1.511933475 1.57348231 1.422630764 1.35266025 1.312357157 1.23550628 1.144950608 1.293258516 1.233750555 1 15.24239308 -1.522878745 0.143167699 0.967699199 3.155211128 0.868063151 0.058530744 25.91229169 0.246783161 0.253215135 11.64807342 0.03 1.522878745 2.187511929 RGS(ph)DASDFDLLETQSACSDTSESSAAGGQGNSR ddPTM_A459_MK2206_30min_R1 3 RGSDASDFDLLETQSACSDTSESSAAGGQGNSR 33 1 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390;H0Y4F5;H0Y314;H0Y6T5 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 RGS(0.784)DAS(0.041)DFDLLET(0.13)QS(0.045)ACSDTSESSAAGGQGNSR;RGS(0.578)DAS(0.374)DFDLLET(0.019)QS(0.019)ACS(0.008)DT(0.001)SESSAAGGQGNSR;RGS(0.863)DAS(0.136)DFDLLET(0.001)QSACSDTSESSAAGGQGNSR 139.87 6.10E-26 19953900 1292.96 1541.07 1353.71 1025.83 993.73 831.79 1124.62 1025.95 1030.46 908.13 TRUE FALSE 1182.986962 1440.746063 1261.823937 1104.839604 954.1476298 878.885231 1049.598652 1016.980227 1137.580005 1020.636 1.159068426 1.411615955 1.236311414 1.082501111 0.934855942 0.861115256 1.028377062 0.996418142 1.114579541 1 9.99525272 -5.827561105 2.824542794 0.98585375 1.29218113 0.6898608 0.083872883 0.140364912 2.270442152 0.025013818 0.042161576 1.49E-06 5.827561105 0.30632738 RGS(ph)DASDFDLLETQSACSDTSESSAAGGQGNSR ddPTM_A459_MK2206_30min_R2 3 RGSDASDFDLLETQSACSDTSESSAAGGQGNSR 33 1 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390;H0Y4F5;H0Y314;H0Y6T5 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 RGS(0.943)DAS(0.057)DFDLLETQSACSDTSESSAAGGQGNSR;RGS(0.882)DAS(0.113)DFDLLET(0.005)QSACSDTSESSAAGGQGNSR;RGS(0.768)DAS(0.232)DFDLLETQSACSDTSESSAAGGQGNSR 126.44 4.96E-25 39828000 41263 51304 43216 55349 50757 49620 57022 33662.1 46453 52385 TRUE FALSE 44422.12701 48756.31796 44656.79987 50826.80965 48764.02515 51508.32387 49534.9429 38061.85205 50493.39797 50675.68174 0.876596535 0.962124559 0.881227412 1.002982257 0.962276648 1.016430803 0.977489423 0.751087124 0.996402934 1 15.62900597 -3.998289035 2.109881989 0.945447012 1.31E-11 0.071468086 0.075918491 68.21150075 24.78107267 0.020312139 265.1105801 0.000100395 3.998289035 -0.945447012 RGS(ph)FDATGSGFSMTFSSSSYSSSGYGR ddPTM_A459_MK2206_30min_R1 13 RGSFDATGSGFSMTFSSSSYSSSGYGR 27 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 RGS(0.845)FDAT(0.106)GS(0.045)GFS(0.004)MTFSSSSYSSSGYGR;RGS(0.923)FDAT(0.038)GS(0.03)GFS(0.009)MTFSSSSYSSSGYGR;RGS(0.932)FDAT(0.032)GS(0.032)GFS(0.004)MTFSSSSYSSSGYGR;RGS(0.983)FDAT(0.008)GS(0.008)GFSMTFSSSSYSSSGYGR;RGS(0.987)FDAT(0.01)GS(0.003)GFSMTFSSSSYSSSGYGR;RGS(0.989)FDAT(0.003)GS(0.008)GFSMTFSSSSYSSSGYGR;RGS(0.914)FDAT(0.036)GS(0.049)GFS(0.001)MTFSSSSYSSSGYGR;RGS(0.648)FDAT(0.173)GS(0.13)GFS(0.048)MTFSSSSYSSSGYGR;RGS(0.886)FDAT(0.094)GS(0.019)GFS(0.001)MTFSSSSYSSSGYGR;RGS(0.718)FDAT(0.137)GS(0.137)GFS(0.008)MTFSSSSYSSSGYGR;RGS(0.792)FDAT(0.087)GS(0.116)GFS(0.005)MT(0.001)FSSSSYSSSGYGR;RGS(0.891)FDAT(0.054)GS(0.054)GFS(0.002)MTFSSSSYSSSGYGR;RGS(0.833)FDAT(0.08)GS(0.087)GFSMTFSSSSYSSSGYGR 134.61 2.56E-12 234645200 11207.68 11040.07 11089.79 9406.23 10324.31 9143.75 10713.53 10308.51 10358.73 9763.04 TRUE FALSE 10254.40796 10321.35944 10337.04595 10130.69946 9913.070871 9661.461223 9998.849962 10218.38378 11435.55705 10972.5591 0.93455026 0.940651979 0.942081592 0.923275908 0.903442012 0.880511204 0.911259613 0.931267145 1.042195986 1 13.42161242 -8.199815204 5.726619064 1.020792179 0.919543153 0.800194372 0.020053806 0.090033059 6.000705541 0.015989219 0.005732609 6.31E-09 8.199815204 -0.101249027 RGS(ph)FDATGSGFSMTFSSSSYSSSGYGR ddPTM_A459_MK2206_30min_R2 2 RGSFDATGSGFSMTFSSSSYSSSGYGR 27 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 RGS(0.974)FDAT(0.011)GS(0.011)GFS(0.005)MTFSSSSYSSSGYGR;RGS(0.923)FDAT(0.016)GS(0.039)GFS(0.021)MT(0.001)FSSSSYSSSGYGR 82.042 6.29E-05 27179300 9671 18903.3 11606 7905.6 9132.4 8381.9 11120.4 10409.1 11450.6 9625.3 TRUE FALSE 10411.4192 17964.58961 11992.93825 7259.687191 8773.816089 8700.879078 9660.278122 11769.60511 12446.55249 9311.227249 1.118157566 1.929347134 1.288008329 0.779670284 0.942283531 0.934450298 1.037487096 1.264022969 1.336725241 1 13.18475562 -4.446550829 17.32090622 1.171451749 0.000110403 0.002275212 0.305515682 31440186.67 100901199.8 0.083660224 1382163277 3.58E-05 4.446550829 -1.171341347 RGS(ph)FSSENYWR ddPTM_A459_MK2206_30min_R1 2 RGSFSSENYWR 11 1 Q6P6C2-3;Q6P6C2;Q6P6C2-1;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 RGS(0.403)FS(0.269)S(0.269)ENY(0.058)WR;RGS(0.838)FS(0.015)S(0.146)ENYWR 135.94 0.0026157 111006000 5562.4 5137.8 5431.4 3990 4481.4 4383.7 6092.3 8224.5 7163.7 7056.1 TRUE FALSE 5089.288671 4803.328286 5062.731701 4297.310491 4302.896348 4631.901306 5685.893783 8152.594064 7908.392251 7930.262939 0.64175535 0.605695968 0.638406537 0.541887517 0.542591889 0.584079159 0.716986792 1.028035782 0.997242123 1 12.95315299 -7.639109996 3.149345083 1.014202689 0.592491257 0.965774099 0.034942493 0.045242413 0.888464978 0.021353933 0.01108179 2.30E-08 7.639109996 -0.421711432 RGS(ph)FSSENYWR ddPTM_A459_MK2206_30min_R2 4 RGSFSSENYWR 11 1 Q6P6C2-3;Q6P6C2;Q6P6C2-1;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 RGS(0.95)FS(0.011)S(0.039)ENYWR;RGS(0.984)FS(0.015)S(0.001)ENYWR;RGS(0.983)FS(0.016)SENYWR;RGS(0.994)FS(0.005)S(0.001)ENYWR 113.69 0.0035682 105651300 29363.1 31515.2 32529 29489.8 29629.3 29774.3 31258.8 37322.6 39221 43198.7 TRUE FALSE 31611.16151 29950.201 33613.50062 27080.38901 28465.90481 30907.38185 27154.48201 42200.79197 42632.37168 41789.12996 0.756444596 0.716698362 0.804359906 0.648024714 0.681179647 0.739603382 0.649797735 1.009850935 1.020178494 1 15.3508401 -7.769318685 24.9994166 1.011261172 0.714545806 0.900385894 0.045159287 51.39591155 163065.6273 0.024375576 0.012046806 1.70E-08 7.769318685 -0.296715366 RGS(ph)GDTSISIDTEASIR ddPTM_A459_MK2206_30min_R1 4 RGSGDTSISIDTEASIR 17 1 Q32MZ4-2;Q32MZ4;Q32MZ4-3;Q32MZ4-4 Q32MZ4-2;Q32MZ4-4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 RGS(0.981)GDT(0.015)S(0.005)ISIDTEASIR;RGS(0.972)GDT(0.018)S(0.01)ISIDTEASIR;RGS(0.795)GDT(0.161)S(0.03)IS(0.01)IDT(0.005)EASIR;RGS(0.799)GDT(0.132)S(0.046)IS(0.016)IDT(0.006)EASIR 134.58 0.000278 33885800 5871.3 4699.31 4735.84 3811.35 4607.61 4249.62 4693.05 4841.07 4035.69 3792.37 TRUE FALSE 5371.915104 4393.384065 4414.384376 4104.900837 4424.079137 4490.229812 4379.985197 4798.745035 4455.214417 4262.197427 1.260362805 1.030779109 1.035706218 0.963094955 1.03798081 1.053501132 1.027635456 1.125885208 1.045285793 1 12.05738171 -4.76037404 24.99784978 1.037606544 1.260363069 0.749133537 0.039013781 13.93548748 326838.8763 0.010231491 0.060855723 1.74E-05 4.76037404 0.222756525 RGS(ph)GDTSISIDTEASIR ddPTM_A459_MK2206_30min_R2 1 RGSGDTSISIDTEASIR 17 1 Q32MZ4-2;Q32MZ4;Q32MZ4-3;Q32MZ4-4 Q32MZ4-2;Q32MZ4-4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 RGS(0.894)GDT(0.065)S(0.01)IS(0.03)IDTEASIR 127.49 0.002072 0 6472.3 8008.4 7666.1 8239.6 6192.4 5824.2 8755.6 5287.4 8409 6100.7 TRUE FALSE 6967.824264 7610.714501 7921.683948 7566.398323 5949.255262 6045.844012 7605.979203 5978.481334 9140.39962 5901.634659 1.180660049 1.289594314 1.342286401 1.282085178 1.008069053 1.024435493 1.288791944 1.013021253 1.548791165 1 12.5268989 RGS(ph)GDTSSLIDPDTSLSELR ddPTM_A459_MK2206_30min_R1 8 RGSGDTSSLIDPDTSLSELR 20 1 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 RGS(0.947)GDT(0.051)S(0.002)SLIDPDTSLSELR;RGS(1)GDTSSLIDPDTSLSELR;RGS(0.916)GDT(0.074)S(0.01)SLIDPDTSLSELR;RGS(0.944)GDT(0.045)S(0.005)S(0.006)LIDPDTSLSELR;RGS(0.842)GDT(0.102)S(0.028)S(0.028)LIDPDTSLSELR;RGS(0.986)GDT(0.013)SSLIDPDTSLSELR;RGS(0.904)GDT(0.042)S(0.042)S(0.012)LIDPDTSLSELR;RGS(0.892)GDT(0.104)S(0.004)SLIDPDTSLSELR 184.12 3.60E-14 653785300 16539.03 17672.39 18053.2 13888.82 16830.49 15448.26 18250.73 16274.63 16463.32 16925.16 TRUE FALSE 15132.29865 16521.9142 16827.79908 14958.53932 16160.09594 16322.92713 17033.2571 16132.34263 18174.74103 19021.9766 0.795516626 0.868569789 0.884650393 0.786381964 0.849548724 0.858108885 0.89545148 0.84808971 0.955460172 1 14.21537955 -8.416426839 0.842226723 1.003164026 0.84086915 0.706812718 0.033585328 0.341146095 0.540112234 0.031885138 0.011650071 3.83E-09 8.416426839 -0.162294876 RGS(ph)GDTSSLIDPDTSLSELR ddPTM_A459_MK2206_30min_R2 5 RGSGDTSSLIDPDTSLSELR 20 1 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 RGS(0.982)GDT(0.018)SSLIDPDTSLSELR;RGS(0.999)GDT(0.001)SSLIDPDTSLSELR;RGS(0.619)GDT(0.221)S(0.08)S(0.08)LIDPDTSLSELR;RGS(1)GDTSSLIDPDTSLSELR;RGS(0.63)GDT(0.116)S(0.192)S(0.061)LIDPDTSLSELR 185.2 3.13E-14 186943000 74323.4 83374 81000.4 85508.3 85993.8 73938.9 88102.3 66386.8 75428.8 80996.1 TRUE FALSE 80013.65665 79233.7684 83700.91291 78521.99836 82617.25133 76752.69665 76534.36218 75063.7827 81989.46068 78353.20389 1.021191894 1.011238398 1.068251313 1.002154277 1.054420843 0.979573174 0.976786633 0.958018038 1.046408527 1 16.25770465 -6.774063246 24.98766874 0.98857273 1.030745233 0.324802651 0.028081176 254.6086065 503968.8656 0.009524457 0.008452263 1.68E-07 6.774063246 0.042172502 RGS(ph)GDTSSLIDPDTSLSELRDIYDLK ddPTM_A459_MK2206_30min_R1 1 RGSGDTSSLIDPDTSLSELRDIYDLK 26 2 C9JSU1;Q9Y608-4;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 RGS(0.985)GDT(0.013)S(0.002)SLIDPDTSLSELRDIYDLK 96.131 1.51E-06 10443000 2440.7 2319.4 2542 2891.2 2599.5 1772.2 1565.5 2769.8 1211 545.83 TRUE FALSE 2233.105648 2168.406638 2369.456122 3113.880725 2495.95641 1872.540432 1461.068351 2745.583931 1336.887784 613.4515412 3.64023154 3.53476435 3.862499257 5.076001144 4.068709984 3.05246675 2.381717631 4.475632949 2.179288328 1 9.260805574 -8.924942107 0.476176416 0.825598785 3.992723757 0.58875045 0.732799162 1.348365823 0.603738055 1.246681163 0.440760757 1.19E-09 8.924942107 3.167124973 RGS(ph)IGENQGEEK ddPTM_A459_MK2206_30min_R1 3 RGSIGENQGEEK 12 1 E7EX44;Q05682-3;Q05682-6;Q05682-2 E7EX44 CALD1 Caldesmon 1 RGS(1)IGENQGEEK;RGS(1)IGENQGEEK;RGS(1)IGENQGEEK 154.13 0.00029345 50428400 10844.7 11861.8 11970.5 9787.2 9930.5 8983.8 10443.8 9687.7 7794.6 9159 TRUE FALSE 9922.301317 11089.59466 11157.97581 10541.01184 9534.947157 9492.454992 9747.113158 9603.00146 8604.876563 10293.68607 0.963921112 1.077320077 1.083963095 1.02402694 0.926290844 0.922162861 0.94690212 0.932902111 0.835937341 1 13.32947207 -6.213029095 3.969446521 0.924119592 1.046225193 0.553913186 0.048358932 0.161802635 5.410858678 0.014580948 0.018690113 6.12E-07 6.213029095 0.122105601 RGS(ph)IGENQGEEK ddPTM_A459_MK2206_30min_R2 1 RGSIGENQGEEK 12 1 E7EX44;Q05682-3;Q05682-6;Q05682-2 E7EX44 CALD1 Caldesmon 1 RGS(1)IGENQGEEK 96.334 0.0088377 19459000 35076 38784 37013 38994 40630 36610 38848 26134 30430 39318 TRUE FALSE 37761.44553 36858.04296 38246.99495 35808.06546 39034.66205 38003.2192 33747.21094 29549.80353 33076.7464 38035.05688 0.992806338 0.969054498 1.005572177 0.941448979 1.026281154 0.999162939 0.887265952 0.776909671 0.86963841 1 15.21504214 -7.332266782 4.782513402 0.861987487 0.988442157 0.449595991 0.055688858 0.170237905 7.465956507 0.02285592 0.015243191 4.65E-08 7.332266782 0.12645467 RGS(ph)IGENQIK ddPTM_A459_MK2206_30min_R1 2 RGSIGENQIK 10 1 Q05682-5;Q05682-4;E9PGZ1;C9J813 Q05682-5 CALD1 Caldesmon 1 RGS(1)IGENQIK;RGS(1)IGENQIK 137.95 0.0030358 37395000 9135.3 9220.3 9391.2 8062.7 8481.5 6712.7 9435.7 8145.8 10029.6 11017 TRUE FALSE 8358.294764 8620.056794 8753.751509 8683.690551 8143.663895 7092.767273 8806.261669 8074.582129 11072.21281 12381.86913 0.675043055 0.696183807 0.706981427 0.701323076 0.657708768 0.572834941 0.711222318 0.6521295 0.894227898 1 13.5959415 -8.403235157 3.158368255 0.997498656 0.671630097 0.890002618 0.039469525 0.072825533 1.341325975 0.039663986 0.010638875 3.95E-09 8.403235157 -0.325868559 RGS(ph)IGENQIK ddPTM_A459_MK2206_30min_R2 4 RGSIGENQIK 10 1 Q05682-5;Q05682-4;E9PGZ1;C9J813 Q05682-5 CALD1 Caldesmon 1 RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK 182.37 7.65E-05 173175000 334426 255303 277184 268313 253753 211898 313810 232971 210051 298855 TRUE FALSE 360029.9117 242625.0243 286425.1762 246390.9696 243789.3822 219961.9269 272606.37 263421.1096 228320.8563 289103.3858 1.24533274 0.839232732 0.990736153 0.852259025 0.843260211 0.760841753 0.942937314 0.911165772 0.789755041 1 18.14122598 -4.75777268 24.9988146 0.877867619 1.245333261 0.673584329 0.076028606 61.10993163 416573.4962 0.018462891 0.133705783 1.75E-05 4.75777268 0.367465642 RGS(ph)IGENQVEVMVEEK ddPTM_A459_MK2206_30min_R1 2 RGSIGENQVEVMVEEK 16 1 Q05682 Q05682 CALD1 Caldesmon 1 RGS(1)IGENQVEVMVEEK;RGS(1)IGENQVEVMVEEK 183.09 4.55E-07 12523600 6900.8 8134.2 9095 7295.3 6881.9 6300.6 7239.2 7419.5 6918.6 6226.4 TRUE FALSE 6313.850722 7604.662102 8477.65674 7857.18527 6607.77935 6657.334527 6756.286177 7354.632094 7637.813228 6997.773439 0.902265667 1.086725966 1.211479167 1.122812183 0.944268832 0.951350395 0.965490843 1.050996029 1.091463348 1 12.77268024 -6.252676631 24.75124917 0.99892728 1.090575293 0.179532793 0.082931678 973.4973411 2749736.512 0.026488633 0.033648788 5.59E-07 6.252676631 0.091648013 RGS(ph)IGENQVEVMVEEK ddPTM_A459_MK2206_30min_R2 2 RGSIGENQVEVMVEEK 16 1 Q05682 Q05682 CALD1 Caldesmon 1 RGS(1)IGENQVEVMVEEK;RGS(1)IGENQVEVMVEEK 164.94 1.07E-05 3890700 50808 59109 51533 60305 55820 43865 60272 41475 51134 58633 TRUE FALSE 54697.89954 56173.73301 53251.0845 55377.88859 53628.22633 45534.31331 52358.214 46895.9249 55581.54289 56719.81001 0.964352658 0.990372376 0.93884455 0.976341222 0.945493758 0.802793826 0.923102775 0.826799753 0.979931754 1 15.79156508 -6.538545313 24.99973026 0.894226351 0.966299038 0.184382204 0.058061596 316.9249926 505725.8534 0.01787089 0.017875975 2.89E-07 6.538545313 0.072072688 RGS(ph)LCATCGLPVTGR ddPTM_A459_MK2206_30min_R2 2 RGSLCATCGLPVTGR 15 1 O43294-2;O43294 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 RGS(0.774)LCAT(0.226)CGLPVT(0.001)GR;RGS(0.99)LCAT(0.01)CGLPVTGR 119.04 0.0035086 11056900 27916 33435 32518 34429 38692 30021 32510 24096 28989 37287 TRUE FALSE 30053.27042 31774.66652 33602.13389 31616.04057 37172.75767 31163.47019 28241.39795 27245.42993 31510.41082 36070.32824 0.833185388 0.880908715 0.931572723 0.87651103 1.030563332 0.863964142 0.782953727 0.755341891 0.873582591 1 15.13852493 -6.993280433 24.99957367 0.831278157 0.912087173 0.087472433 0.078254603 283.2430347 1053774.808 0.027056784 0.023804015 1.02E-07 6.993280433 0.080809016 RGS(ph)LEMSSDGEPLSR ddPTM_A459_MK2206_30min_R1 2 RGSLEMSSDGEPLSR 15 1 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 RGS(0.942)LEMS(0.029)S(0.029)DGEPLSR;RGS(0.997)LEMS(0.001)S(0.001)DGEPLSR 132.15 0.0011647 26430000 4685.2 4740.6 4620.4 3907.8 4650.6 3735.6 3510.9 3928.5 3774.6 3265.7 TRUE FALSE 4286.699137 4431.986078 4306.780121 4208.779433 4465.356754 3947.106444 3276.694267 3894.153539 4166.983178 3670.279571 1.167948941 1.207533648 1.173420182 1.146719031 1.216625782 1.07542392 0.892764217 1.060996435 1.135331273 1 11.84167424 -6.919721899 5.208211348 1.021707102 1.180375873 0.622230551 0.059300212 0.142100802 6.710483719 0.021973019 0.019262013 1.20E-07 6.919721899 0.158668771 RGS(ph)LEMSSDGEPLSR ddPTM_A459_MK2206_30min_R2 2 RGSLEMSSDGEPLSR 15 1 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 RGS(0.971)LEMS(0.014)S(0.014)DGEPLS(0.001)R;RGS(1)LEMSSDGEPLSR 133.9 0.0008941 37302000 33368 52194 37554 47749 47510 47772 39571 33822 33509 32794 TRUE FALSE 35922.67974 49602.12186 38806.03162 43847.75396 45644.51868 49589.99694 34375.28017 38242.65153 36423.55225 31723.93447 1.132352602 1.563555173 1.223241451 1.382166326 1.438803838 1.563172972 1.083575564 1.205482617 1.148141076 1 14.95328409 -7.281083355 24.92333565 1.126423339 1.387165636 0.498041191 0.134582696 703.6995112 892816.5321 0.054220612 0.036613781 5.23E-08 7.281083355 0.260742297 RGS(ph)LPDQK ddPTM_A459_MK2206_30min_R2 2 RGSLPDQK 8 1 X6RKU3;Q6P3S6 X6RKU3 FBXO42 F-box only protein 42 1 RGS(1)LPDQK;RGS(1)LPDQK 84.687 0.018649 15775000 118983 94689 96682 102072 89650 67772 91840 74569 82415 107827 TRUE FALSE 128092.43 89986.88195 99905.32963 93732.39109 86129.89054 70351.11095 79781.29768 84315.42433 89583.30773 104308.6138 1.228013922 0.862698474 0.957785996 0.89860643 0.825721744 0.674451595 0.764858191 0.808326573 0.858829434 1 16.67049878 -1.522879737 0.857769671 0.817409181 144.8734622 0.600546829 0.090628749 468.9486281 1.258719823 0.031412976 131897.1055 0.029999931 1.522879737 144.056053 RGS(ph)LQAYTFEEQPTLPVLLPTSSGLPPGWEEKQDER ddPTM_A459_MK2206_30min_R1 1 RGSLQAYTFEEQPTLPVLLPTSSGLPPGWEEKQDER 36 2 P46934-3;P46934-2;P46934;H0Y8X6;P46934-4 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 RGS(0.856)LQAY(0.104)T(0.038)FEEQPT(0.001)LPVLLPTSSGLPPGWEEKQDER 43.546 0.0096546 12333000 662.28 568.83 700.25 601.51 1001 613.98 721.39 469.24 521.31 370.94 TRUE FALSE 605.9496082 531.7990636 652.718981 647.8384044 961.1280503 648.743017 673.2673894 465.1374842 575.50204 416.8948477 1.453483082 1.27561918 1.565668141 1.553961168 2.30544478 1.55613105 1.614957328 1.115718956 1.380448915 1 8.703539732 -7.754962064 24.66517317 1.18606292 1.624331552 0.377928723 0.265554318 148.3507095 564916.5937 0.137824107 0.077099155 1.76E-08 7.754962064 0.438268632 RGS(ph)LSNAGDPEIVK ddPTM_A459_MK2206_30min_R1 4 RGSLSNAGDPEIVK 14 1 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 RGS(0.994)LS(0.006)NAGDPEIVK;RGS(0.995)LS(0.005)NAGDPEIVK;RGS(0.941)LS(0.059)NAGDPEIVK;RGS(0.999)LS(0.001)NAGDPEIVK 158.92 0.00015511 114299000 19588.1 19401.2 18522.1 14720.9 15159.7 14642.7 17860.4 15614.3 17447.9 15130.9 TRUE FALSE 17922.02923 18138.17835 17264.87146 15854.70627 14555.85705 15471.75702 16668.9653 15477.78582 19261.67164 17005.43012 1.053900378 1.066610972 1.015256382 0.932331976 0.855953477 0.909812743 0.980214272 0.910167265 1.13267771 1 14.05370788 -5.56464494 3.821046579 0.951116719 1.057776122 0.243793164 0.070139099 0.283340183 8.740285475 0.019679535 0.037854648 2.72E-06 5.56464494 0.106659403 RGS(ph)LSNAGDPEIVK ddPTM_A459_MK2206_30min_R2 2 RGSLSNAGDPEIVK 14 1 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 RGS(0.828)LS(0.172)NAGDPEIVK;RGS(0.852)LS(0.148)NAGDPEIVK 109.72 0.0022995 56735000 212106 210412 203831 221127 209624 169034 236330 167682 192407 210030 TRUE FALSE 228344.9984 199963.246 210626.6238 203060.2167 201393.1085 175466.7073 205299.5871 189598.6131 209142.2131 203176.7383 1.123873729 0.984183759 1.03666702 0.999426502 0.991221289 0.863616124 1.010448287 0.933170868 1.029361013 1 17.63237571 -1.522879182 0.765225054 0.970522312 28.65622875 0.418012825 0.048833952 395.435752 1.600900985 0.017650567 18907.4966 0.02999997 1.522879182 27.68570644 RGS(ph)LTLTISGESPK ddPTM_A459_MK2206_30min_R1 1 RGSLTLTISGESPK 14 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(0.502)LT(0.383)LT(0.113)IS(0.002)GESPK 179.66 0.00013086 15113000 4624.1 4360 3807.6 3064.6 3597.6 3457.8 4294.5 5918.3 5617.7 5767.6 TRUE FALSE 4230.796013 4076.163208 3549.150721 3300.636023 3454.299974 3653.577648 4008.021741 5866.556927 6201.680018 6482.133831 0.652685693 0.628830461 0.547528146 0.509189737 0.532895504 0.563638108 0.618318265 0.905034836 0.956734338 1 12.66225309 -7.77933274 2.96109222 0.970681464 0.569312153 0.94603581 0.041384784 0.060961196 1.081420832 0.02919391 0.013218833 1.66E-08 7.77933274 -0.401369311 RGS(ph)LTLTISGESPK ddPTM_A459_MK2206_30min_R2 2 RGSLTLTISGESPK 14 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(0.97)LT(0.027)LT(0.004)ISGESPK;RGS(0.987)LT(0.013)LTISGESPK 83.891 0.013785 15737700 150309 169828 157543 165536 153742 144892 211035 179709 211950 235550 TRUE FALSE 161816.7726 161394.5885 162795.405 152011.1793 147705.3166 150405.9666 183325.851 203197.5833 230385.0279 227864.0228 0.710146212 0.708293422 0.714441021 0.667113559 0.648216927 0.660068951 0.804540571 0.891749302 1.011063638 1 17.79781363 -7.760733927 1.684341478 1.003721437 0.68462711 0.957191895 0.027266175 0.076971111 0.41599741 0.023058345 0.009128547 1.73E-08 7.760733927 -0.319094327 RGS(ph)PAPANPGR ddPTM_A459_MK2206_30min_R1 2 RGSPAPANPGR 11 1 E9PJN1;O75676-2;O75676 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 RGS(1)PAPANPGR;RGS(1)PAPANPGR 78.985 0.023893 8491500 854.93 971.73 1046.52 829.11 817.51 543.22 932.98 978.85 410.81 802.68 TRUE FALSE 782.2137141 908.4702004 975.4851382 892.9681959 784.9468456 573.976647 870.7426065 970.2920176 453.5151696 902.1220583 0.867081906 1.007036899 1.081322787 0.989852967 0.870111576 0.636251649 0.965215958 1.075566226 0.502720408 1 9.817178835 -6.29828152 4.926763889 0.839902615 0.995171765 0.154386036 0.166250473 0.382443684 23.63955733 0.05151223 0.060280855 5.03E-07 6.29828152 0.15526915 RGS(ph)PSAAFTFPDTDDFGK ddPTM_A459_MK2206_30min_R1 3 RGSPSAAFTFPDTDDFGK 18 1 Q9ULT0;Q9ULT0-4;H7C055;Q9ULT0-3 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 RGS(0.635)PS(0.365)AAFTFPDTDDFGK;RGS(0.972)PS(0.028)AAFTFPDTDDFGK;RGS(0.97)PS(0.028)AAFT(0.002)FPDTDDFGK 142.04 0.00015647 40084000 14246.41 14810.34 15029.17 12995.16 13587.19 11468.22 13110.74 13196.06 12077.77 12225.58 TRUE FALSE 13034.67802 13846.18417 14009.03181 13996.04947 13045.98345 12117.54071 12236.14646 13080.68824 13333.29741 13740.17715 0.948654292 1.007715113 1.019567045 1.0186222 0.949477093 0.881905712 0.890537751 0.952002882 0.970387592 1 13.74611298 -6.399543147 5.088389675 0.931317907 1.00036552 0.353122083 0.037763384 0.233165153 8.713881381 0.012373116 0.014021536 3.99E-07 6.399543147 0.069047613 RGS(ph)PSAAFTFPDTDDFGK ddPTM_A459_MK2206_30min_R2 1 RGSPSAAFTFPDTDDFGK 18 1 Q9ULT0;Q9ULT0-4;H7C055;Q9ULT0-3 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 RGS(0.602)PS(0.397)AAFT(0.001)FPDTDDFGK 111.66 0.00066285 4168100 16723 26385 20203 29041 21893 17319 22997 17957 17906 22521 TRUE FALSE 18003.32574 25074.75927 20876.55794 26668.2574 21033.37082 17978.08668 19977.46628 20304.04156 19463.43151 21786.14161 0.826365956 1.150949981 0.958249437 1.224092723 0.965447264 0.825207464 0.916980465 0.931970512 0.89338589 1 14.41112309 -6.516474259 24.96624731 0.907902139 1.048607107 0.233634236 0.10724633 371.6262516 1448695.459 0.032824893 0.033962741 3.04E-07 6.516474259 0.140704968 RGS(ph)PTTGFIEQK ddPTM_A459_MK2206_30min_R1 6 RGSPTTGFIEQK 12 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(0.896)PT(0.052)T(0.052)GFIEQK;RGS(0.886)PT(0.107)T(0.007)GFIEQK;RGS(0.673)PT(0.327)TGFIEQK;RGS(0.99)PT(0.01)TGFIEQK;RGS(0.95)PT(0.049)TGFIEQK;RGS(0.999)PT(0.001)TGFIEQK 195.94 0.00029728 211301900 33187.1 34333.9 34721 28763.1 29286.3 26618.7 30267 29803.7 29498.8 27172.2 TRUE FALSE 30364.36287 32098.75687 32364.23526 30978.43895 28119.76466 28125.82779 28247.94366 29543.12939 32565.30582 30538.49728 0.994297873 1.051091564 1.059784801 1.014406134 0.920797261 0.920995802 0.924994554 0.967406128 1.066368968 1 14.89834145 -6.061761384 6.328125939 0.960992349 1.036845829 0.328904356 0.044414671 0.251856351 20.40580811 0.013847205 0.018166431 8.67E-07 6.061761384 0.075853481 RGS(ph)PTTGFIEQK ddPTM_A459_MK2206_30min_R2 3 RGSPTTGFIEQK 12 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(0.997)PT(0.003)T(0.001)GFIEQK;RGS(0.997)PT(0.002)TGFIEQK;RGS(0.996)PT(0.004)TGFIEQK 147.39 0.001133 141838000 115564 130093 108961 120809 112784 86242 129419 107276 88744 120074 TRUE FALSE 124411.6687 123632.7708 112593.7054 110938.5183 108355.5335 89523.99974 112426.1298 121297.3415 96462.79271 116155.9952 1.07107402 1.0643684 0.969331847 0.955082155 0.932844949 0.770722162 0.96788917 1.044262428 0.830459009 1 16.82570409 -5.388000129 1.665394152 0.923702405 1.081363335 0.353908581 0.074300078 0.493135902 2.469869615 0.022688117 0.084120638 4.09E-06 5.388000129 0.157660931 RGS(ph)PVPPVPER ddPTM_A459_MK2206_30min_R1 2 RGSPVPPVPER 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(1)PVPPVPER;RGS(1)PVPPVPER 74.296 0.028464 93023000 3169 3619.4 3603.2 2698 3819.8 3086.3 3067 3606.5 2872.2 2881.9 TRUE FALSE 2899.459909 3383.776402 3358.624823 2905.800427 3667.649277 3261.043639 2862.406026 3574.968751 3170.775468 3238.931529 0.895190245 1.044719955 1.036954561 0.897147841 1.132363943 1.006826977 0.883750089 1.103749406 0.978957239 1 11.66130225 -4.750386263 24.70916306 1.009818838 0.895189958 0.174689219 0.07445843 750.9092256 1678525.452 0.017894693 0.261958562 1.78E-05 4.750386263 -0.11462888 RGS(ph)PVPPVPER ddPTM_A459_MK2206_30min_R2 5 RGSPVPPVPER 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(1)PVPPVPER;RGS(1)PVPPVPER;RGS(1)PVPPVPER;RGS(1)PVPPVPER;RGS(1)PVPPVPER 93.478 0.012086 261391600 207817 244164 214088 253348 220494 205527 271669 216622 215987 242066 TRUE FALSE 223727.6293 232039.1708 221225.5871 232648.658 211836.2977 213348.474 235998.534 244935.2392 234773.1588 234167.4062 0.955417463 0.990911479 0.944732619 0.993514263 0.904636136 0.911093809 1.007819738 1.045983483 1.002586836 1 17.83718076 -7.41732551 6.765062878 1.019862092 0.951745493 0.533418514 0.029322592 0.201818393 11.19127168 0.013044334 0.008719324 3.83E-08 7.41732551 -0.068116599 RGS(ph)SDPTVQR ddPTM_A459_MK2206_30min_R2 2 RGSSDPTVQR 10 1 Q2KHT3;A0A2R8YDG4;H7BZJ9;H7BZI2;Q2KHT3-2;H7BXG1 Q2KHT3;H7BXG1 CLEC16A Protein CLEC16A 1 RGS(0.939)S(0.06)DPT(0.001)VQR;RGS(0.9)S(0.1)DPT(0.001)VQR 141.34 0.00067722 4512100 23050 27735 25077 21501.5 18332.4 22345.4 24833 17701.7 25830 21414 TRUE FALSE 24814.72572 26357.72023 25913.05466 19744.75867 17612.57786 23195.76986 21572.39727 20015.37297 28076.64671 20715.26293 1.197895764 1.27238164 1.250916039 0.95315028 0.850222269 1.119742961 1.041376947 0.966213803 1.355360383 1 14.33840651 -5.74849096 24.98501947 1.034823166 1.243596289 0.342941983 0.126347544 253.7322075 489592.5154 0.034516365 0.059310896 1.78E-06 5.74849096 0.208773123 RGS(ph)SGSVDETLFALPAASEPVIR ddPTM_A459_MK2206_30min_R1 1 RGSSGSVDETLFALPAASEPVIR 23 1 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 RGS(0.637)S(0.181)GS(0.181)VDETLFALPAASEPVIR 166.39 1.91E-12 31213000 2641.2 2543.3 2287.1 1858.2 2229.4 1774.3 2530.9 2134.9 2674.6 2716.5 TRUE FALSE 2416.552071 2377.730708 2131.858024 2001.318886 2140.598277 1874.759333 2362.068279 2116.234794 2952.634241 3053.040529 0.791523089 0.77880745 0.698273739 0.655516646 0.701136541 0.614063035 0.773677341 0.69315647 0.967112691 1 11.57603103 -8.288368095 5.727346875 0.990424102 0.711061491 0.803839898 0.053415024 0.081971152 8.651103948 0.050412335 0.014168348 5.15E-09 8.288368095 -0.279362611 RGS(ph)SGSVDETLFALPAASEPVIR ddPTM_A459_MK2206_30min_R2 4 RGSSGSVDETLFALPAASEPVIR 23 1 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 RGS(0.43)S(0.141)GS(0.43)VDETLFALPAASEPVIR;RGS(0.585)S(0.208)GS(0.208)VDETLFALPAASEPVIR;RGS(0.613)S(0.193)GS(0.193)VDET(0.002)LFALPAASEPVIR;RGS(0.662)S(0.169)GS(0.169)VDETLFALPAASEPVIR 147.16 6.55E-08 64106000 182020 122664 125268 120454 119795 126877 166696 90174 119125 139781 TRUE FALSE 195955.5911 116572.6841 129444.3726 110612.5229 115091.2464 131705.3931 144808.615 101960.0514 129486.2772 135219.9574 1.449161758 0.862096737 0.957287482 0.818019211 0.851140975 0.974008539 1.070911556 0.754031087 0.957597382 1 17.04494857 -4.758254028 24.99922455 0.911271158 1.449162497 0.759265523 0.090006466 42.20699474 331192.9214 0.022135409 0.153771384 1.74E-05 4.758254028 0.537891339 RGS(ph)SPGSLEIPK ddPTM_A459_MK2206_30min_R1 2 RGSSPGSLEIPK 12 1 A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 RGS(0.499)S(0.499)PGS(0.002)LEIPK;RGS(0.498)S(0.498)PGS(0.005)LEIPK 101.2 0.0065456 13453100 10665.2 10627.3 11840.3 10018.6 10238.8 9844 11257 10498.6 10659 9806.7 TRUE FALSE 9758.068735 9935.460838 11036.61342 10790.23431 9830.966915 10401.35877 10506.06607 10406.81185 11767.04119 11021.62803 0.885356383 0.901451293 1.001359635 0.979005486 0.891970486 0.943722537 0.953222703 0.944217299 1.067631856 1 13.42804972 -8.243511471 21.17992194 1.033815829 0.939054936 0.504839527 0.038116444 82.80770425 97830.65479 0.026955157 0.010102158 5.71E-09 8.243511471 -0.094760893 RGS(ph)SPGSLEIPK ddPTM_A459_MK2206_30min_R2 2 RGSSPGSLEIPK 12 1 A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 RGS(0.761)S(0.239)PGSLEIPK;RGS(0.768)S(0.232)PGSLEIPK 144.4 0.0003827 11253600 97708 108238 103527 102696 102455 87585 123363 83065 98557 110800 TRUE FALSE 105188.5996 102863.0583 106978.5385 94305.40829 98432.1019 90918.10855 107165.2899 93921.8807 107129.3097 107184.6051 0.981377872 0.959681274 0.998077461 0.879840983 0.918341788 0.848238499 0.999819795 0.876262786 0.999484111 1 16.70973818 -10.85189397 14.65187717 1 0.937165773 0.097192268 0.054072822 3.51E-11 0 0.051144868 0.012404452 1.41E-11 10.85189397 -0.062834226 RGS(ph)SSDEEGGPK ddPTM_A459_MK2206_30min_R1 2 RGSSSDEEGGPK 12 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 RGS(0.866)S(0.109)S(0.025)DEEGGPK;RGS(0.917)S(0.071)S(0.012)DEEGGPK 111.81 0.012052 1206600 2189.58 2226.19 1201.42 1873.78 947.85 753.06 1608.73 2297.07 544.6 1075.87 TRUE FALSE 2003.344723 2081.264626 1119.870958 2018.09886 910.0951274 795.6976064 1501.414557 2276.986959 601.2131189 1209.156898 1.656811226 1.721252742 0.926158516 1.66901323 0.752669177 0.65805985 1.241703669 1.883119521 0.497216796 1 10.23978574 -5.25170202 23.97623943 1.110299562 1.689032146 0.259007456 0.41025843 559.2508958 1377025.994 0.104779946 0.269184222 5.60E-06 5.25170202 0.578732584 RGS(ph)SSDEEGGPK ddPTM_A459_MK2206_30min_R2 1 RGSSSDEEGGPK 12 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 RGS(0.987)S(0.011)S(0.002)DEEGGPK 123.63 0.0058377 8541200 11308 6334 6527.9 8827.7 15904 7681.2 11755 62098 26987 17599 TRUE FALSE 12173.74917 6019.46277 6745.536928 8106.448672 15279.52905 7973.513448 10211.55438 70214.42181 29334.28048 17024.74607 0.715062012 0.353571369 0.396219532 0.476156804 0.897489395 0.468348451 0.59980656 4.124256627 1.723037768 1 14.05534566 -7.649620028 12.35417644 2.441766389 0.546579384 0.522027097 0.751585464 0.296247059 31.0139077 0.326460631 0.188391016 2.24E-08 7.649620028 -1.895187005 RGS(ph)SSSSPEHSASSDSTK ddPTM_A459_MK2206_30min_R2 2 RGSSSSSPEHSASSDSTK 18 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 RGS(0.2)S(0.2)S(0.2)S(0.2)S(0.2)PEHSASSDSTK;RGS(0.496)S(0.378)S(0.06)S(0.06)S(0.008)PEHSASSDSTK 91.128 0.0028164 9693000 17546.8 36224 26977.6 47150 52853 50351 55392 40387 46599 37599 TRUE FALSE 18890.1965 34425.16883 27877.01972 43297.69417 50777.72565 52267.14259 48118.96386 45665.71957 50652.09679 36372.14771 0.519358842 0.94647061 0.766438648 1.190407961 1.396060691 1.437010072 1.322961851 1.25551342 1.392606705 1 15.1505465 -5.827869757 3.186556386 1.321001842 0.752736131 0.733567072 0.150111831 0.117784978 2.409985118 0.041705503 0.06867883 1.49E-06 5.827869757 -0.568265711 RGS(ph)TASQYDNVPGPELDSGASVEEALER ddPTM_A459_MK2206_30min_R1 1 RGSTASQYDNVPGPELDSGASVEEALER 28 1 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 RGS(0.437)T(0.347)AS(0.196)QY(0.02)DNVPGPELDSGASVEEALER 69.215 0.00030324 3671000 300.13 272.58 202.34 316.98 237.36 237.11 215.65 183.53 192.81 337.75 TRUE FALSE 274.6023675 254.8349925 188.6057246 341.3938545 227.9054486 250.5349633 201.264382 181.9254166 212.8532895 379.5930199 0.723412584 0.671337404 0.496862995 0.899368104 0.600394203 0.660009405 0.530210967 0.479264389 0.560740789 1 8.568309653 -10.62477996 5.033938997 1.000011342 0.623595588 0.475774838 0.118203859 1.55E-05 2.76E-06 0.11770166 0.028545986 2.37E-11 10.62477996 -0.376415754 RGSFDAT(ph)GSGFSMTFSSSSYSSSGYGR ddPTM_A459_MK2206_30min_R1 1 RGSFDATGSGFSMTFSSSSYSSSGYGR 27 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 RGS(0.385)FDAT(0.545)GS(0.068)GFS(0.003)MTFSSSSYSSSGYGR 82.148 0.00010891 7117900 573.34 832.56 703.18 575.55 706.91 567.37 487.54 548.62 681.14 665.32 TRUE FALSE 524.5744223 778.3601927 655.4501008 619.8789607 678.7522778 599.4939991 455.0170962 543.8234732 751.9469405 747.7448645 0.701541993 1.040943549 0.876569177 0.828997951 0.90773245 0.80173603 0.608519186 0.727284799 1.005619665 1 9.546402287 -6.780767606 19.57144558 0.797829593 0.878547976 0 0.136343005 57.84936305 58572.91247 0.047647623 0.042180526 1.66E-07 6.780767606 0.080718383 RGSGDT(ph)SSLIDPDTSLSELR ddPTM_A459_MK2206_30min_R1 1 RGSGDTSSLIDPDTSLSELR 20 1 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 RGS(0.156)GDT(0.728)S(0.056)S(0.055)LIDPDT(0.005)SLSELR 182.47 1.93E-11 97713000 1012.2 1010.5 1261.4 725.25 916.81 1007.9 1125.6 846.12 1154.9 1034.1 TRUE FALSE 926.1070747 944.7162663 1175.779682 781.1088807 880.2915163 1064.966427 1050.513278 838.722462 1274.955988 1162.212115 0.796848581 0.812860453 1.011673917 0.672088056 0.757427586 0.916327074 0.903891178 0.721660402 1.097008 1 10.18265768 -8.270860259 24.99978176 1.048504029 0.828419999 0.461541274 0.096864292 680.8138763 1806625.445 0.088948732 0.024205075 5.36E-09 8.270860259 -0.22008403 RGSGDT(ph)SSLIDPDTSLSELR ddPTM_A459_MK2206_30min_R2 1 RGSGDTSSLIDPDTSLSELR 20 1 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 RGS(0.275)GDT(0.614)S(0.056)S(0.056)LIDPDTSLSELR 121.51 0.031435 55799000 13847 20973 16916 18955 14454 13773 18874 15640 12365 16158 TRUE FALSE 14907.13697 19931.51132 17479.971 17406.31587 13886.46333 14297.14117 16395.82113 17684.2017 13440.48535 15630.76578 0.953704839 1.275146182 1.118305478 1.113593288 0.888405823 0.914679509 1.048945481 1.131371421 0.85987376 1 13.93210084 -6.136236417 7.173457954 0.98148055 1.128933743 0.304206305 0.103691473 0.323763215 17.51680852 0.030672175 0.039756382 7.31E-07 6.136236417 0.147453193 RGSGDTSSLIDPDTS(ph)LSELR ddPTM_A459_MK2206_30min_R1 2 RGSGDTSSLIDPDTSLSELR 20 1 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 RGSGDTSSLIDPDT(0.223)S(0.764)LS(0.013)ELR;RGSGDTSSLIDPDT(0.433)S(0.556)LS(0.011)ELR 125.79 0.0001134 5636600 2446.5 2191.84 2098.3 1769.97 2280.05 1940.47 2074.04 1846.55 2095.4 1962.59 TRUE FALSE 2238.412328 2049.150818 1955.873242 1906.293396 2189.23078 2050.337734 1935.684576 1830.405808 2313.224328 2205.730466 1.014816798 0.929012338 0.886723592 0.864245848 0.992519627 0.929550444 0.877570767 0.829841105 1.048733907 1 11.10704079 -8.283358578 24.90544996 1.024366982 0.915082135 0.39034236 0.054402322 936.1491185 1063678.236 0.05370945 0.013916403 5.21E-09 8.283358578 -0.109284847 RGSGS(ph)PEDTPR ddPTM_A459_MK2206_30min_R1 1 RGSGSPEDTPR 11 1 Q96HP0 Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 RGS(0.04)GS(0.957)PEDT(0.004)PR 63.292 0.044663 1021500 380.37 321.67 269.75 270.79 361.47 372.71 190.2 331.35 57.43 200.61 TRUE FALSE 348.0175341 300.7292245 251.4401216 291.6462927 347.0718845 393.8125181 177.512105 328.4530419 63.40005402 225.4630813 1.543567719 1.333829125 1.115216381 1.293543453 1.539373464 1.746682942 0.78732227 1.456793014 0.281199271 1 7.816747407 -8.248723301 24.8758416 0.640599617 1.34216511 0.480035194 0.296033049 524.9285408 1026897.404 0.198102667 0.073769471 5.64E-09 8.248723301 0.701565493 RGSGS(ph)PEDTPR ddPTM_A459_MK2206_30min_R2 2 RGSGSPEDTPR 11 1 Q96HP0 Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 RGS(0.345)GS(0.654)PEDTPR;RGS(0.016)GS(0.984)PEDTPR 101.72 0.0076958 14530200 20365 28888 25636 30770 27972 32698 30603 20749.6 22777 22312 TRUE FALSE 21924.16006 27453.46393 26490.69144 28255.99257 26873.67873 33942.3453 26584.78934 23461.64396 24758.10229 21583.96127 1.015761648 1.271938158 1.227332236 1.30911987 1.245076305 1.572572564 1.231691857 1.086994351 1.14706017 1 14.39767204 -7.698052886 4.729938859 1.086748149 1.281113731 0.30545444 0.131252515 0.263400631 11.51742195 0.06806846 0.03695371 2.00E-08 7.698052886 0.194365583 RGSLEMS(ph)SDGEPLSR ddPTM_A459_MK2206_30min_R1 2 RGSLEMSSDGEPLSR 15 1 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 RGS(0.072)LEMS(0.464)S(0.464)DGEPLSR;RGS(0.096)LEMS(0.452)S(0.452)DGEPLSR 140.27 0.00070065 26398000 4939 4880.2 4842.8 4196.9 3783 3721.4 3439.1 3484.9 2983.6 3187.6 TRUE FALSE 4518.912114 4562.498093 4514.084229 4520.145965 3632.315099 3932.102452 3209.683914 3454.431887 3293.755897 3582.503953 1.261383706 1.273550051 1.260036078 1.261728117 1.013904003 1.097584958 0.895933112 0.964250684 0.919400492 1 11.80675258 -6.444567756 1.284223607 0.949578544 1.279083767 0.877504217 0.051648104 0.133677996 0.454867119 0.020931252 0.025242017 3.59E-07 6.444567756 0.329505223 RGSLS(ph)NAGDPEIVK ddPTM_A459_MK2206_30min_R2 1 RGSLSNAGDPEIVK 14 1 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 RGS(0.069)LS(0.931)NAGDPEIVK 63.292 0.040464 67249000 53367 66860 58125 58052 54801 50174 63690 55419 48045 58194 TRUE FALSE 57452.81855 63539.82962 60062.85849 53308.9659 52649.23739 52083.40673 55327.42649 62662.45358 52223.86725 56295.13455 1.020564548 1.128691318 1.066928056 0.94695512 0.935236017 0.92518487 0.982810094 1.113106027 0.927679944 1 15.78072262 -5.693634474 6.664740958 0.97716113 1.079311771 0.370645597 0.057297952 0.230874465 17.91054441 0.016319908 0.028317978 2.02E-06 5.693634474 0.102150641 RGSS(ph)GSVDETLFALPAASEPVIR ddPTM_A459_MK2206_30min_R1 3 RGSSGSVDETLFALPAASEPVIR 23 1 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 RGS(0.23)S(0.385)GS(0.385)VDETLFALPAASEPVIR;RGS(0.235)S(0.383)GS(0.383)VDETLFALPAASEPVIR;RGS(0.254)S(0.373)GS(0.373)VDETLFALPAASEPVIR 153.27 1.63E-08 49849100 6088.6 5172.6 4662.3 4405.38 5814.1 4782.1 6788.4 4343.62 6601.3 6554 TRUE FALSE 5570.732597 4835.8628 4345.836066 4744.683131 5582.512085 5052.858369 6335.558222 4305.644188 7287.528758 7365.959 0.756280696 0.656515031 0.589989174 0.644136511 0.757879875 0.685974273 0.860113153 0.584532739 0.989352338 1 12.84665765 -8.275687338 24.30673242 0.994676328 0.693362416 0.701654889 0.078961476 341.5880597 582734.2239 0.074850586 0.01972792 5.30E-09 8.275687338 -0.301313913 RGSS(ph)GSVDETLFALPAASEPVIR ddPTM_A459_MK2206_30min_R2 1 RGSSGSVDETLFALPAASEPVIR 23 1 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 RGS(0.25)S(0.375)GS(0.375)VDET(0.001)LFALPAASEPVIR 100.86 0.00031126 0 3721.9 2709.2 2175.8 5077.4 1832.3 4000.8 4378.6 986.19 1153.2 2783.5 TRUE FALSE 4006.851526 2574.665068 2248.340086 4662.560178 1760.354695 4153.053247 3803.68456 1115.088419 1253.503251 2692.674623 1.488056333 0.956173852 0.834983948 1.731572073 0.65375693 1.54235243 1.412604601 0.414119259 0.465523476 1 11.39482419 -7.763211679 24.99904018 0.579865938 1.214513085 0.381572269 0.350882184 46.42939094 654866.8775 0.174468614 0.090617731 1.72E-08 7.763211679 0.634647147 RGSSAAASPGS(ph)PPPGR ddPTM_A459_MK2206_30min_R1 7 RGSSAAASPGSPPPGR 16 1 Q86UX6 Q86UX6 STK32C Serine/threonine-protein kinase 32C 1 RGSSAAASPGS(1)PPPGR;RGSSAAAS(0.043)PGS(0.957)PPPGR;RGSSAAASPGS(1)PPPGR;RGSSAAAS(0.084)PGS(0.915)PPPGR;RGSSAAASPGS(1)PPPGR;RGSSAAASPGS(1)PPPGR;RGSSAAASPGS(1)PPPGR 145.19 0.00019647 105774900 7561.14 7809.31 7719.11 6879.22 8349.9 7791.8 8180.93 7614.51 6834.42 6605.25 TRUE FALSE 6918.025338 7300.9225 7195.15832 7409.058716 8017.305802 8232.964982 7635.195087 7547.937142 7544.882416 7423.558237 0.931901538 0.983480195 0.969233094 0.998046823 1.079981533 1.109032181 1.028508815 1.016754621 1.01634313 1 12.85789515 -6.00396663 3.839846804 1.045275644 0.964799856 0.545272156 0.03284915 0.181662799 5.99652641 0.010578991 0.015227573 9.91E-07 6.00396663 -0.080475788 RGSSAAASPGS(ph)PPPGR ddPTM_A459_MK2206_30min_R2 8 RGSSAAASPGSPPPGR 16 1 Q86UX6 Q86UX6 STK32C Serine/threonine-protein kinase 32C 1 RGSSAAAS(0.002)PGS(0.998)PPPGR;RGSSAAAS(0.003)PGS(0.997)PPPGR;RGSSAAAS(0.001)PGS(0.999)PPPGR;RGS(0.001)S(0.001)AAAS(0.02)PGS(0.979)PPPGR;RGSSAAAS(0.004)PGS(0.996)PPPGR;RGSSAAASPGS(1)PPPGR;RGSSAAASPGS(1)PPPGR;RGSSAAASPGS(1)PPPGR 144.75 0.0001994 83987180 58278.09 78829 58733.7 82946.2 80436.69 92374.5 85679.33 64072.43 79889.84 77028.03 TRUE FALSE 62739.90538 74914.46649 60691.85224 76169.23013 77278.34139 95889.87633 74429.53105 72446.91659 86838.51388 74514.61169 0.841981243 1.005366126 0.814495988 1.022205288 1.037089769 1.286860042 0.998858202 0.972251146 1.165389068 1 16.18523573 -5.950049178 4.806300347 1.078332173 0.899198068 0.419134575 0.099256009 0.204833517 10.29763002 0.028659783 0.042737096 1.12E-06 5.950049178 -0.179134105 RGSSSS(ph)SPEHSASSDSTK ddPTM_A459_MK2206_30min_R2 1 RGSSSSSPEHSASSDSTK 18 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 RGS(0.082)S(0.209)S(0.209)S(0.353)S(0.147)PEHSASSDSTK 56.461 0.032756 5199300 8419.3 18035 11882 23248 30484 22197 28752 22840 26891 22134 TRUE FALSE 9063.888081 17139.40813 12278.13995 21348.56403 29287.04499 23041.72239 24976.82786 25825.26642 29229.93057 21411.76939 0.423313362 0.800466688 0.573429488 0.997048102 1.367801252 1.076124162 1.166499947 1.206124816 1.365133821 1 14.3861164 -5.904378842 3.70183212 1.199686753 0.618760793 0.789609883 0.137520735 0.097182716 2.570418575 0.038150992 0.05891863 1.25E-06 5.904378842 -0.580925959 RGSSSSS(ph)PEHSASSDSTK ddPTM_A459_MK2206_30min_R2 1 RGSSSSSPEHSASSDSTK 18 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 RGS(0.023)S(0.023)S(0.023)S(0.023)S(0.907)PEHSASSDSTK 79.455 0.0062038 3180100 3612.3 7358.9 5395 8078 12340 11470 13576 8408 13334 10227 TRUE FALSE 3888.860465 6993.467727 5574.866607 7418.00156 11855.4696 11906.49889 11793.45489 9506.954469 14493.76722 9893.293828 0.393080458 0.706889722 0.563499549 0.749800995 1.198333922 1.20349189 1.192065565 0.96094937 1.465009275 1 13.27223521 -6.12461499 2.983837514 1.172965519 0.573268305 0.786273037 0.146970821 0.115990963 1.976930997 0.04342697 0.059249335 7.51E-07 6.12461499 -0.599697214 RGT(ph)SLMEDDEEPIVEDVMMSSEGR ddPTM_A459_MK2206_30min_R1 2 RGTSLMEDDEEPIVEDVMMSSEGR 24 1 Q8N3U4;Q8N3U4-2 Q8N3U4 STAG2 Cohesin subunit SA-2 1 RGT(0.5)S(0.5)LMEDDEEPIVEDVMMSSEGR;RGT(0.5)S(0.5)LMEDDEEPIVEDVMMSSEGR 99.964 7.57E-06 3730800 375.74 431.19 131.66 354.63 348.62 352.89 358.72 262.52 337.44 236.76 TRUE FALSE 343.7813399 403.1194526 122.723286 381.943664 334.7337272 372.8703268 334.7904433 260.2248153 372.5180955 266.0916162 1.291966071 1.514964877 0.461206887 1.435384058 1.2579642 1.401285512 1.258177345 0.977951951 1.399961791 1 8.055779246 -10.81062341 4.806973566 0.999919047 1.214809497 0.049598505 0.290088899 0.000245886 3.64E-05 0.274400428 0.066526861 1.55E-11 10.81062341 0.21489045 RGT(ph)SPRPPEGGLGYSQLGDDDLK ddPTM_A459_MK2206_30min_R2 2 RGTSPRPPEGGLGYSQLGDDDLK 23 2 Q9UQ88-8;P21127;P21127-9;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-8;P21127-3;P21127-2;P21127-6;P21127-10;P21127-5;P21127-4;P21127-12;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 Q9UQ88-8;P21127;Q5QPR4 CDK11A;CDK11B Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B 1 RGT(0.496)S(0.496)PRPPEGGLGY(0.007)S(0.001)QLGDDDLK;RGT(0.634)S(0.366)PRPPEGGLGYSQLGDDDLK 71.265 0.0041272 18542200 86988 75978 80412 62619 61128 54008 90314 65967 48812.3 94531 TRUE FALSE 93647.86816 72205.043 83092.89595 57502.82739 58727.80758 56063.31229 78455.66331 74589.1134 53057.90562 91446.46121 1.024073178 0.78958816 0.908650754 0.628814135 0.642209735 0.613072519 0.857940945 0.815658828 0.580207314 1 16.48063972 -4.266522649 1.055723856 0.73259986 1.538192051 0.266082116 0.133055757 6.030193086 2.593122987 0.041185112 7.093331705 5.41E-05 4.266522649 0.805592192 RGTGQS(ph)DDSDIWDDTALIK ddPTM_A459_MK2206_30min_R1 2 RGTGQSDDSDIWDDTALIK 19 1 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 RGT(0.27)GQS(0.718)DDS(0.011)DIWDDTALIK;RGT(0.087)GQS(0.913)DDS(0.001)DIWDDTALIK 136.77 8.76E-05 6281200 4032.6 4373.5 4143.3 4566.9 4306.1 3393.2 4231 4638.1 3226.1 2617.2 TRUE FALSE 3689.606194 4088.784355 3862.06434 4918.643429 4134.578919 3585.320052 3948.75771 4597.549581 3561.46464 2941.438495 1.254354358 1.390062842 1.312984904 1.672189794 1.405631607 1.218900228 1.342458024 1.56302761 1.21079011 1 11.52230615 -6.618162469 10.29885585 1.307124741 1.416770016 0.126205385 0.167699095 0.930972706 93.06311482 0.055419912 0.05540262 2.41E-07 6.618162469 0.109645275 RGTLVAER ddPTM_A459_MK2206_30min_R2 2 RGTLVAER 8 1 A0A087WW53;F5H390;Q9BR76 A0A087WW53 CORO1B Coronin;Coronin-1B 0 ; 106.88 0.016284 1200900 5981.3 10560.8 9330 11062.5 8273.7 8870.8 9636.7 8336.9 9916.3 7680.6 FALSE TRUE 6439.232927 10036.36603 9641.057543 10158.65836 7948.832966 9208.38451 8371.389714 9426.561455 10778.80185 7429.982651 0.866655177 1.35079266 1.297588164 1.367251963 1.069831969 1.239354779 1.126703804 1.268719174 1.450716961 1 12.85914313 -7.933555498 24.99787269 1.270148798 1.202670441 0.004518891 0.173577322 237.0985719 89198.95294 0.091640511 0.044022674 1.17E-08 7.933555498 -0.067478357 RGVAEAAEER ddPTM_A459_MK2206_30min_R2 1 RGVAEAAEER 10 1 Q03169 Q03169 TNFAIP2 Tumor necrosis factor alpha-induced protein 2 0 139.31 0.0035503 0 2666.4 3826.9 2912.7 4280.7 4190.5 5815 4927.7 4359.3 4770.9 3567 FALSE TRUE 2870.541634 3636.861711 3009.807964 3930.953117 4025.959914 6036.2939 4280.687071 4929.075478 5185.864258 3450.609082 0.831894186 1.05397674 0.872254113 1.139205579 1.16673892 1.749341567 1.240559846 1.428465341 1.502883733 1 11.75263533 -6.233309824 2.094752446 1.399706964 0.940696508 0.490659764 0.196278947 0.251711769 2.168526821 0.062821175 0.082935734 5.84E-07 6.233309824 -0.459010456 RHGAPAAPS(ph)PPPR ddPTM_A459_MK2206_30min_R1 4 RHGAPAAPSPPPR 13 1 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR 99.747 0.0058993 67846900 7232.5 6138 6185.3 5914.5 6069.05 5914.2 6534 6931.8 4064.56 4676.8 TRUE FALSE 6617.337896 5738.415084 5765.459069 6370.035815 5827.306887 6249.056893 6098.128782 6871.196003 4487.085557 5256.197292 1.258959192 1.091742712 1.096887873 1.211909573 1.10865452 1.188893138 1.160178822 1.307256106 0.853675254 1 12.35980371 -8.270614899 24.99945192 0.926837606 1.171057083 0.647443984 0.074009295 443.0020114 1206980.33 0.0651363 0.017779494 5.36E-09 8.270614899 0.244219476 RHGAPAAPS(ph)PPPR ddPTM_A459_MK2206_30min_R2 4 RHGAPAAPSPPPR 13 1 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR 106.35 0.0035873 54613700 25777.3 43642.3 30746.3 46955.7 51150.1 57532.4 49952.8 31119.6 54108.3 34320.6 TRUE FALSE 27750.82991 41475.08684 31771.3663 43119.26911 49141.69007 59721.8358 43393.93736 35187.03857 58814.54213 33200.72163 0.835850203 1.249222451 0.956948064 1.298744936 1.480139215 1.798811377 1.307017897 1.059827523 1.771483848 1 15.01892698 -5.915982551 4.301523848 1.419092167 1.03928864 0.303830087 0.261350024 0.27133867 9.381133822 0.074310419 0.112880098 1.21E-06 5.915982551 -0.379803527 RHS(ph)EQVANGPTPPPR ddPTM_A459_MK2206_30min_R2 2 RHSEQVANGPTPPPR 15 1 A6ND36;A6ND36-2;K7EKG0 A6ND36 FAM83G Protein FAM83G 1 RHS(1)EQVANGPTPPPR;RHS(1)EQVANGPTPPPR 90.498 0.0079592 5106600 9552.1 11862.9 11574.3 11048.8 8386.8 9941.4 11867 8857.3 9765.6 7772.6 TRUE FALSE 10283.41612 11273.80564 11960.18139 10146.0777 8057.492092 10319.72694 10308.84865 10014.97952 10614.99424 7518.980699 1.367660928 1.499379515 1.59066526 1.349395364 1.071620265 1.37249015 1.371043371 1.331959733 1.41175974 1 12.87632138 -13.75796575 0.164054358 7.95E-16 1.46881564 0.44546945 0.125456929 106.0376384 1.235274654 35.96466635 0.565820557 1.75E-14 13.75796575 1.46881564 RHS(ph)GSYLVTSV ddPTM_A459_MK2206_30min_R2 1 RHSGSYLVTSV 11 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 RHS(0.748)GS(0.251)Y(0.001)LVTSV 68.033 0.037534 5077000 11480 19483 13200 21852 24595 22372 23611 16930 16912 20657 TRUE FALSE 12358.91763 18515.50255 13640.08141 20066.6217 23629.27672 23223.38214 20510.84734 19142.80913 18382.97519 19982.96378 0.618472703 0.926564385 0.682585504 1.004186462 1.182471078 1.162159047 1.02641668 0.957956454 0.919932368 1 14.28648295 -5.843754112 5.954361782 1.048195385 0.761904273 0.614126961 0.106371837 0.143526981 8.057373001 0.031380584 0.047344939 1.43E-06 5.843754112 -0.286291112 RHS(ph)IAIGEVPACR ddPTM_A459_MK2206_30min_R2 1 RHSIAIGEVPACR 13 1 Q8WUY9-2;Q8WUY9 Q8WUY9-2 DEPDC1B DEP domain-containing protein 1B 1 RHS(1)IAIGEVPACR 70.167 0.031671 4777300 5890.1 8986.4 6668.4 7906.4 11063 9645.5 8453.9 6880.2 7005.9 6708.5 TRUE FALSE 6341.050585 8540.148443 6890.721128 7260.421829 10628.61103 10012.56626 7343.892775 7779.465763 7615.260518 6489.602194 0.977109289 1.315974106 1.061809479 1.11877764 1.637790841 1.542862869 1.131639899 1.198758496 1.173455674 1 12.66391433 RHS(ph)LEVR ddPTM_A459_MK2206_30min_R2 1 RHSLEVR 7 1 Q96P66 Q96P66 GPR101 Probable G-protein coupled receptor 101 1 RHS(1)LEVR 101.21 0.036039 14505000 18233 24244 22036 23826 23978 27396 30521 24010 20295 21769 TRUE FALSE 19628.9325 23040.07821 22770.66924 21879.33958 23036.50324 28438.57398 26513.55604 27148.18944 22060.22242 21058.67931 0.93210653 1.094089419 1.081296168 1.038970168 1.093919657 1.350444325 1.259032233 1.289168662 1.047559635 1 14.36212734 -6.539333898 24.39371468 1.212843363 1.046728874 0.297767066 0.107773092 200.5446146 297292.0152 0.034558385 0.034567547 2.89E-07 6.539333898 -0.166114488 RHS(ph)PPIEK ddPTM_A459_MK2206_30min_R1 2 RHSPPIEK 8 1 Q8IZD4;Q8IZD4-2;F5GZK9 Q8IZD4 DCP1B mRNA-decapping enzyme 1B 1 RHS(1)PPIEK;RHS(1)PPIEK 83.226 0.020234 19346500 7219.8 7670.8 6514.9 6837.3 5497 5710.3 7457.5 7713.7 759.22 5475.3 TRUE FALSE 6605.718097 7171.429526 6072.68674 7363.910031 5278.04285 6033.612251 6960.023782 7646.259934 838.1436359 6153.6215 1.073468379 1.165399842 0.986847621 1.196679066 0.857713275 0.980497785 1.131045155 1.242562601 0.136203313 1 12.58721999 -8.24137916 24.98787361 0.568101486 1.074027472 0.459630727 0.221643917 570.293593 710384.8621 0.138319873 0.052133012 5.74E-09 8.24137916 0.505925986 RHS(ph)SETFSSTPSATR ddPTM_A459_MK2206_30min_R1 1 RHSSETFSSTPSATR 15 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 RHS(0.901)S(0.095)ET(0.004)FSSTPSATR 98.572 0.0045148 5252400 418.3 409.07 527.82 465.4 616.61 743.16 648.53 379.88 362.71 315.61 TRUE FALSE 382.7213884 382.4394686 491.993049 501.2451886 592.049118 785.237077 605.267747 376.5587492 400.4150025 354.7101495 1.078969375 1.078174586 1.387028394 1.413112056 1.669106787 2.213742905 1.706372789 1.061595643 1.128851269 1 8.470496801 -5.388090596 2.119433458 1.510716442 1.055870736 0.14628658 0.342809184 0.627147981 5.32328551 0.107827476 0.327378686 4.09E-06 5.388090596 -0.454845706 RHS(ph)SETFSSTPSATR ddPTM_A459_MK2206_30min_R2 2 RHSSETFSSTPSATR 15 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 RHS(0.908)S(0.072)ET(0.016)FS(0.002)S(0.001)T(0.001)PSATR;RHS(0.604)S(0.391)ET(0.003)FSS(0.001)T(0.001)PSATR 78.373 0.016994 7357500 5332.3 10615.4 6841.1 11380.2 11311 14031.7 12225.4 9156.4 10996.1 7324.4 TRUE FALSE 5740.544988 10088.25467 7069.17886 10450.40126 10866.87331 14565.68618 10620.19029 10353.17292 11952.5209 7085.405428 0.810192874 1.423807681 0.99770986 1.474919306 1.533698166 2.055730801 1.498882513 1.461196967 1.686921239 1 12.79063469 -5.883625503 4.533544803 1.580081043 1.113283678 0.342924248 0.283046417 0.231340502 8.095645052 0.078262234 0.119566146 1.31E-06 5.883625503 -0.466797365 RHS(ph)VTLPSSK ddPTM_A459_MK2206_30min_R2 3 RHSVTLPSSK 10 1 G3V2D5;G3V515;G3V2P5;Q07352 G3V2D5 ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1" 1 RHS(0.993)VT(0.007)LPSSK;RHS(0.997)VT(0.003)LPSSK;RHS(0.999)VT(0.001)LPSSK 97.631 0.010485 90323000 627780 758440 727490 771320 682820 622310 719800 544550 730890 707570 TRUE FALSE 675843.3195 720776.9725 751744.1535 708300.6887 656009.0559 645992.4431 625289.3954 615724.5547 794461.4911 684482.0488 0.987379173 1.053025384 1.098267157 1.034798049 0.958402133 0.943768276 0.913521978 0.899548141 1.160675422 1 19.38465318 -6.187936063 5.051469546 0.969274724 1.049399624 0.14908302 0.072559146 0.362392445 17.21458137 0.021780404 0.028238206 6.49E-07 6.187936063 0.080124901 RHS(ph)VVAGGGGGEGR ddPTM_A459_MK2206_30min_R2 1 RHSVVAGGGGGEGR 14 1 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 RHS(1)VVAGGGGGEGR 70.335 0.029734 3173700 1072.6 2665.2 1210.5 2879.4 1206.4 4619.1 3154.6 2690.8 3934.4 3001.6 TRUE FALSE 1154.719081 2532.850044 1250.857466 2644.143809 1159.030674 4794.883087 2740.397231 3042.496799 4276.607 2903.658038 0.397677366 0.872296259 0.430786769 0.910625072 0.39916225 1.651324992 0.943774093 1.047815121 1.472834247 1 11.50365584 -6.747874545 24.99999503 1.208677228 0.624741717 0.5825434 0.262371628 171.1737601 315472.7368 0.08197102 0.081540294 1.79E-07 6.747874545 -0.583935511 RHS(ph)WGPGK ddPTM_A459_MK2206_30min_R2 1 RHSWGPGK 8 1 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;H0YMW2;A0A087WY36;H0YLH1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 RHS(1)WGPGK 66.663 0.041866 36803000 114870 131960 122720 137700 142720 129260 142670 114410 138230 126070 TRUE FALSE 123664.5355 125407.0583 126811.4235 126449.4695 137116.0957 134179.0799 123937.2576 129363.7798 150252.9955 121956.3462 1.014006563 1.028294649 1.03980996 1.036842062 1.12430472 1.100222203 1.016242791 1.060738402 1.23202277 1 16.89600531 -6.127680832 6.645315938 1.088777987 1.029247772 0.189323328 0.060163091 0.441197311 21.94037514 0.017742683 0.023036341 7.45E-07 6.127680832 -0.059530216 RHSS(ph)ETFSSTPSATR ddPTM_A459_MK2206_30min_R2 2 RHSSETFSSTPSATR 15 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 RHS(0.42)S(0.571)ET(0.009)FSSTPSATR;RHS(0.026)S(0.956)ET(0.017)FSSTPSATR 81.643 0.013807 6524400 4871 9578 9520 11768.4 10265.1 10759.7 8087 7015.1 12571.4 7902 TRUE FALSE 5243.927505 9102.370448 9837.392049 10806.88407 9862.040596 11169.16792 7025.167186 7931.997656 13664.83765 7644.158387 0.686004559 1.190761623 1.286916303 1.413744133 1.290140797 1.461137689 0.919024284 1.037654802 1.78761833 1 12.90014196 -4.755618914 3.37948454 1.274249404 0.589504014 0.348558157 0.239960514 0.393271587 6.859734299 0.05979145 0.729157515 1.76E-05 4.755618914 -0.68474539 RHSTS(ph)SLSPQR ddPTM_A459_MK2206_30min_R2 1 RHSTSSLSPQR 11 1 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 RHS(0.011)T(0.123)S(0.427)S(0.268)LS(0.172)PQR 62.68 0.045728 590620 632.98 910.41 0 1739.4 1098.4 981.37 2489.7 1050.9 888.81 770.81 TRUE FALSE 681.4414355 865.2003633 0 1597.285456 1055.271297 1018.716723 2162.799399 1188.256238 966.1170872 745.6585328 0.91387868 1.160317123 0 2.14211383 1.415220574 1.366197365 2.900522564 1.593566205 1.295656181 1 9.542371303 -5.773193049 24.99813778 1.725639042 0.738290317 0.379949992 0.571161453 220.2134992 468358.0886 0.160966862 0.240947009 1.69E-06 5.773193049 -0.987348725 RHSTSSLS(ph)PQR ddPTM_A459_MK2206_30min_R2 1 RHSTSSLSPQR 11 1 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 RHSTS(0.003)S(0.012)LS(0.984)PQR 78.401 0.024463 658270 461.76 1140.1 0 2305.3 932.26 2144.8 2164.4 949.39 1091.3 685.36 TRUE FALSE 497.1127006 1083.484292 0 2116.949616 895.6547882 2226.421867 1880.21168 1073.478533 1186.219301 662.9967593 0.749796577 1.634222606 0 3.193001453 1.350918802 3.358118778 2.835928915 1.61913089 1.789178129 1 9.372858008 -5.759361831 24.99978689 2.233455312 0.878628147 0.363932433 0.823598443 58.63145466 705509.3288 0.221292843 0.360248218 1.74E-06 5.759361831 -1.354827165 RHSVS(ph)EMTSCPEPQGFSDPPGQGPTGTFR ddPTM_A459_MK2206_30min_R2 1 RHSVSEMTSCPEPQGFSDPPGQGPTGTFR 29 1 P85299;P85299-5;P85299-2;P85299-4;P85299-3 P85299 PRR5 Proline-rich protein 5 1 RHS(0.218)VS(0.26)EMT(0.26)S(0.26)CPEPQGFS(0.003)DPPGQGPTGTFR 45.511 0.023826 5798600 1412.9 1761.8 3693.3 1459.3 1127.6 2615.3 1304.5 1603.4 1738.8 3361.4 TRUE FALSE 1521.07271 1674.311574 3816.432779 1340.070522 1083.324758 2714.827074 1133.217583 1812.969885 1890.037681 3251.717793 0.467775129 0.51490064 1.173666665 0.412111569 0.333154605 0.834890125 0.348498134 0.557542198 0.581242839 1 11.66698634 -10.4022459 6.810100172 1.00000001 0.583709107 0.215171923 0.240323819 3.57E-08 5.61E-09 0.232938488 0.05649588 3.96E-11 10.4022459 -0.416290902 RHSVSEMTSCPEPQGFS(ph)DPPGQGPTGTFR ddPTM_A459_MK2206_30min_R2 1 RHSVSEMTSCPEPQGFSDPPGQGPTGTFR 29 1 P85299;P85299-5;P85299-2;P85299-4;P85299-3 P85299 PRR5 Proline-rich protein 5 1 RHS(0.019)VS(0.02)EMT(0.02)S(0.02)CPEPQGFS(0.918)DPPGQGPT(0.001)GT(0.001)FR 46.399 0.029109 3574700 6538.8 8536.2 6674.9 5509.9 4814.1 5017.3 7097.8 4241 5508.5 7664 TRUE FALSE 7039.415555 8112.304721 6897.437835 5059.723545 4625.074245 5208.236867 6165.850334 4795.313262 5987.619373 7413.924308 0.94948576 1.094198482 0.930335616 0.682462261 0.623836184 0.702493936 0.831658118 0.646798249 0.807618088 1 12.85602167 -5.610219708 4.464705354 0.737838403 1.020526036 0.498141881 0.109184744 0.146426455 5.266835145 0.028691873 0.051838106 2.45E-06 5.610219708 0.282687633 RHT(ph)VEDAVVSQGPEAAGPLSTPQEVSASR ddPTM_A459_MK2206_30min_R1 1 RHTVEDAVVSQGPEAAGPLSTPQEVSASR 29 1 Q96NW4 Q96NW4 ANKRD27 Ankyrin repeat domain-containing protein 27 1 RHT(1)VEDAVVSQGPEAAGPLSTPQEVSASR 66.385 0.00073381 2955900 353.37 418.57 351.2 325.42 487.1 395.37 396.35 462.98 378.6 419.53 TRUE FALSE 323.3140259 391.3210169 327.3615225 350.4839048 467.6977755 417.7555077 369.9102147 458.9322147 417.9568248 471.5045437 0.685707127 0.829941137 0.694291342 0.743330917 0.991926338 0.886005264 0.784531601 0.97333572 0.886432232 1 8.881127863 -2.195253868 0.151491745 1.02934687 6.34E-11 0.530315846 0.077452733 47.00203146 0.561571073 0.289926538 10.26215422 0.006378905 2.195253868 -1.02934687 RHVTLPS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 RHVTLPSSPR 10 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 RHVT(0.001)LPS(0.765)S(0.234)PR 92.792 0.013414 3523000 1438.9 1158.1 1180.5 1014.1 1687.1 1336.2 1606.7 1511.6 1130.6 1287.8 TRUE FALSE 1316.513999 1082.70748 1100.370949 1092.206158 1619.899235 1411.854489 1499.519975 1498.384241 1248.129916 1447.342386 0.909607852 0.748065896 0.760269967 0.754628737 1.11922324 0.975480648 1.036050618 1.035265915 0.862359817 1 10.49919053 -6.248180867 24.97684851 1.006596896 0.787575217 0.663271623 0.07380665 454.4408032 856091.306 0.021445007 0.027518393 5.65E-07 6.248180867 -0.219021679 RHVTLPSS(ph)PR ddPTM_A459_MK2206_30min_R2 2 RHVTLPSSPR 10 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 RHVTLPS(0.033)S(0.966)PR;RHVTLPS(0.127)S(0.873)PR 99.669 0.0093677 12212100 14683.6 28391 20145.5 32896 32945 40629 31435 24149 29938 23136 TRUE FALSE 15807.78771 26981.14422 20817.14092 30208.29157 31651.41376 42175.16507 27307.54674 27305.35722 32541.95312 22381.07421 0.706301563 1.205533924 0.93012251 1.349724829 1.414204406 1.884412011 1.220117787 1.220019958 1.453994246 1 14.44999166 -5.798393029 5.890991727 1.392739579 0.972262776 0.377054399 0.242482065 0.188396383 17.10779194 0.068598016 0.105703866 1.59E-06 5.798393029 -0.420476803 RIDFIPVS(ph)PAPSPTR ddPTM_A459_MK2206_30min_R2 4 RIDFIPVSPAPSPTR 15 1 Q96E09 Q96E09 FAM122A Protein FAM122A 1 RIDFIPVS(0.997)PAPS(0.002)PT(0.001)R;RIDFIPVS(0.698)PAPS(0.253)PT(0.049)R;RIDFIPVS(0.991)PAPS(0.006)PT(0.003)R;RIDFIPVS(0.963)PAPS(0.032)PT(0.005)R 129.06 0.0004705 10620700 28120.4 35156.1 30399.9 40389.9 32322.7 40064 37716.7 26543.4 36527.8 34063.4 TRUE FALSE 30273.31944 33410.2992 31413.41749 37089.91597 31053.54839 41588.66359 32764.45198 30012.71352 39704.92202 32951.91405 0.918712018 1.013910729 0.953310859 1.125576982 0.942389821 1.262101605 0.994311042 0.910803344 1.204935227 1 15.00807465 -5.739090692 24.83175501 1.059581672 0.967171102 0.155897963 0.107192121 451.5277083 501690.6325 0.028230955 0.048851137 1.82E-06 5.739090692 -0.09241057 RIDFIPVSPAPS(ph)PTR ddPTM_A459_MK2206_30min_R1 1 RIDFIPVSPAPSPTR 15 1 Q96E09 Q96E09 FAM122A Protein FAM122A 1 RIDFIPVS(0.018)PAPS(0.884)PT(0.098)R 87.963 0.028792 0 1345.3 1953.2 1612.6 1762.9 1791.3 1639.4 1995.6 1775.3 2010.4 1953.5 TRUE FALSE 1230.875171 1826.046325 1503.141205 1898.678863 1719.948728 1732.221411 1862.477165 1759.778739 2219.388274 2195.514328 0.560631809 0.831716879 0.684641947 0.864799122 0.783392167 0.788982057 0.848310185 0.801533707 1.010873965 1 11.10034323 -2.728129238 0.112209003 1.104666398 1.31E-11 0.622067699 0.077750357 54.68265653 0.565969274 0.722599508 9.176379385 0.001870126 2.728129238 -1.104666398 RIDFTPVS(ph)PAPS(ph)PTR ddPTM_A459_MK2206_30min_R1 1 RIDFTPVSPAPSPTR 15 1 G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-2;Q7Z309;Q7Z309-5 G1UD79;Q7Z309-2 SPACIA2;FAM122B Protein FAM122B 2 RIDFTPVS(1)PAPS(0.757)PT(0.243)R 107.18 0.010535 6305500 1813.4 1736.9 1909.8 1653.1 1763.9 1638.1 1986.2 1526.3 1619 1298.2 TRUE FALSE 1659.160807 1623.827494 1780.168097 1780.422048 1693.640128 1730.847806 1853.704222 1512.95572 1787.300844 1459.030817 1.13716639 1.112949415 1.220103151 1.220277206 1.16079805 1.18629969 1.270503817 1.0369594 1.224991839 1 10.51079464 -10.52536376 4.708053613 0.999997029 1.17405993 0.404207981 0.063536895 7286919.838 16290699.07 145.5898974 0.015007384 2.98E-11 10.52536376 0.174062901 RIDFTPVS(ph)PAPS(ph)PTR ddPTM_A459_MK2206_30min_R2 1 RIDFTPVSPAPSPTR 15 1 G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-2;Q7Z309;Q7Z309-5 G1UD79;Q7Z309-2 SPACIA2;FAM122B Protein FAM122B 2 RIDFTPVS(1)PAPS(0.891)PT(0.109)R 97.08 0.0239 4558700 12263 18605 13313 19704 19629 17373 17923 11530 20584 14257 TRUE FALSE 13201.86471 17681.10275 13756.84878 18094.12017 18858.26683 18034.14169 15569.68857 13037.01059 22374.35911 13791.79526 0.957225978 1.28200154 0.99746614 1.311948143 1.36735403 1.30759929 1.128909491 0.945272921 1.6222949 1 13.75152264 -4.752376254 24.4537754 1.217096544 0.957225308 0.137171129 0.196264297 553.210181 1492504.702 0.0468755 0.551198389 1.77E-05 4.752376254 -0.259871235 RIDFTPVS(ph)PAPSPTR ddPTM_A459_MK2206_30min_R2 3 RIDFTPVSPAPSPTR 15 1 G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-2;Q7Z309;Q7Z309-5 G1UD79;Q7Z309-2 SPACIA2;FAM122B Protein FAM122B 1 RIDFTPVS(0.541)PAPS(0.285)PT(0.175)R;RIDFTPVS(0.859)PAPS(0.104)PT(0.037)R;RIDFT(0.001)PVS(0.935)PAPS(0.041)PT(0.023)R 90.755 0.0078229 17562200 39643 49078 41725.5 53197 44325.3 40271 47482 41764.8 40722.3 42244.7 TRUE FALSE 42678.09856 46640.85789 43116.60734 48850.63493 42584.86601 41803.54112 41247.55636 47223.60276 44264.25204 40866.2589 1.044335834 1.141304811 1.055066172 1.195378198 1.042054427 1.022935357 1.009330374 1.155564616 1.083149112 1 15.31862256 RIDFTPVSPAPS(ph)PTR ddPTM_A459_MK2206_30min_R2 1 RIDFTPVSPAPSPTR 15 1 G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-2;Q7Z309;Q7Z309-5 G1UD79;Q7Z309-2 SPACIA2;FAM122B Protein FAM122B 1 RIDFTPVSPAPS(0.746)PT(0.254)R 102.47 0.0032234 3775200 18130 20749 19177 21248 24246 25682 25559 18346 24268 31331 TRUE FALSE 19518.04674 19718.63483 19816.35161 19511.97043 23293.98021 26659.34651 22203.0726 20743.88519 26378.78677 30308.67204 0.643975649 0.650593824 0.653817877 0.643775168 0.768558259 0.879594674 0.732565009 0.684420788 0.870337926 1 14.88744302 -14.52287874 0.05423861 2.128678032 0.20482025 0.715374749 0.063193873 285.8778436 1.136716649 44.40053366 8.724787746 3.00E-15 14.52287874 -1.923857782 RIDIS(ph)PSTFR ddPTM_A459_MK2206_30min_R1 3 RIDISPSTFR 10 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RIDIS(0.825)PS(0.087)T(0.087)FR;RIDIS(0.94)PS(0.03)T(0.03)FR;RIDIS(0.988)PS(0.007)T(0.004)FR 86.262 0.018125 449547100 3287.15 2782.19 3129.06 2671.36 3696.73 3044.07 3018.77 2629.97 1987.01 1950.57 TRUE FALSE 3007.560631 2601.068925 2916.668125 2877.10861 3549.481416 3216.422613 2817.393361 2606.97645 2193.5668 2192.221338 1.371923801 1.186499228 1.330462429 1.312417027 1.619125476 1.467197932 1.285177419 1.189193995 1.000613744 1 11.09817775 -7.958188962 1.925535273 0.995803069 1.375780065 0.661233534 0.106598242 0.241928371 1.652209319 0.099297735 0.034197636 1.10E-08 7.958188962 0.379976996 RIDIS(ph)PSTFR ddPTM_A459_MK2206_30min_R2 3 RIDISPSTFR 10 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RIDIS(0.998)PS(0.002)TFR;RIDIS(0.965)PS(0.026)T(0.009)FR;RIDIS(0.983)PS(0.008)T(0.008)FR 88.163 0.016754 571003000 60523.1 80426 74611 81493 101784 87630 81037 65044 74190 63954 TRUE FALSE 65156.79507 76432.16179 77098.4935 74834.76122 97787.44874 90964.82106 70396.74456 73545.47413 80642.9121 61867.18622 1.05317211 1.235423275 1.246193632 1.209603439 1.580602816 1.4703242 1.137868858 1.188763844 1.3034844 1 15.9168868 -9.581378557 0.778304364 0.991901226 1.281216711 0.228997919 0.146815604 10.29549528 6.125140481 0.427981845 0.05458783 2.62E-10 9.581378557 0.289315485 RIDIS(ph)PSTLR ddPTM_A459_MK2206_30min_R1 2 RIDISPSTLR 10 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 RIDIS(0.992)PS(0.007)T(0.001)LR;RIDIS(0.997)PS(0.003)T(0.001)LR 108.72 0.018873 781090000 6378.7 6077.2 6770.9 5805.6 6989.7 6190.7 5805 5749.2 5665 4730.8 TRUE FALSE 5836.158069 5681.573175 6311.310173 6252.748318 6711.285448 6541.212084 5417.759042 5698.935351 6253.897022 5316.88722 1.097664447 1.068590124 1.187031041 1.176016729 1.26225838 1.230270986 1.018971969 1.071855602 1.176232778 1 12.37636615 -10.65323161 5.297514615 0.999996458 1.143578559 0.25469738 0.073491145 3.39E-06 5.57E-07 0.078370665 0.019007208 2.22E-11 10.65323161 0.143582101 RIDIS(ph)PSTLR ddPTM_A459_MK2206_30min_R2 2 RIDISPSTLR 10 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 RIDIS(0.995)PS(0.005)TLR;RIDIS(0.984)PS(0.013)T(0.003)LR 80.371 0.02451 495953000 19951.6 29568 31604 29753 34146 37568 29919 28131 31094 29486 TRUE FALSE 21479.10984 28099.69612 32657.66159 27322.08472 32805.25647 38997.67657 25990.59936 31807.81829 33798.49991 28523.87423 0.753022176 0.985129015 1.144923769 0.957867241 1.150098202 1.36719424 0.91118756 1.115129664 1.184919679 1 14.79988233 -4.393754091 1.270849398 1.112221912 0.217077962 0.429931533 0.122739522 3.17655561 2.319451653 0.036223718 4.712364073 4.04E-05 4.393754091 -0.89514395 RIDT(ph)PSLEEPSDLEELEQFAK ddPTM_A459_MK2206_30min_R1 2 RIDTPSLEEPSDLEELEQFAK 21 1 A0A0C4DG88;P14859-4;P14859-5;P14859-3;P14859;P14859-2;P14859-6 A0A0C4DG88 POU2F1 "POU domain protein;POU domain, class 2, transcription factor 1" 1 RIDT(0.735)PS(0.264)LEEPSDLEELEQFAK;RIDT(0.5)PS(0.5)LEEPS(0.001)DLEELEQFAK 119.29 9.32E-05 9375200 2929.2 3049 3418.7 3104.8 3653.3 2948.3 2794.7 2812.7 2540.97 2282.45 TRUE FALSE 2680.056158 2850.509546 3186.648169 3343.932234 3507.781325 3115.230198 2608.270662 2788.10886 2805.112924 2565.217138 1.044767758 1.111215696 1.242252799 1.303566932 1.367440313 1.214411892 1.016783579 1.086890002 1.093518706 1 11.32486524 -7.250341844 22.89471393 1.056538909 1.221611028 0.449502308 0.088874836 247.2567571 510102.7808 0.038605906 0.029553836 5.62E-08 7.250341844 0.165072119 RIDT(ph)PSLEEPSDLEELEQFAK ddPTM_A459_MK2206_30min_R2 3 RIDTPSLEEPSDLEELEQFAK 21 1 A0A0C4DG88;P14859-4;P14859-5;P14859-3;P14859;P14859-2;P14859-6 A0A0C4DG88 POU2F1 "POU domain protein;POU domain, class 2, transcription factor 1" 1 RIDT(0.774)PS(0.123)LEEPS(0.103)DLEELEQFAK;RIDT(0.879)PS(0.121)LEEPSDLEELEQFAK;RIDT(0.5)PS(0.5)LEEPSDLEELEQFAK 126.22 0.00036538 4887400 27506.6 33662.4 34473 40306 38691 32613 36240 33758 27474.1 37275.1 TRUE FALSE 29612.52644 31990.77417 35622.31261 37012.87087 37171.79693 33854.11057 31481.64447 38170.28651 29863.74756 36058.81654 0.821228462 0.887183142 0.987894669 1.026458282 1.030865694 0.938858061 0.873063719 1.058556275 0.828195444 1 15.13806443 -5.030500906 3.143550529 0.969711073 0.825363783 0.326534314 0.068309331 0.29316081 5.585021156 0.0175122 0.07727872 9.32E-06 5.030500906 -0.14434729 RIEQHYFEDR ddPTM_A459_MK2206_30min_R1 2 RIEQHYFEDR 10 1 C9JNK6;O75431-2;O75431 C9JNK6 MTX2 Metaxin-2 0 ; 125.74 0.0024126 32506000 6787.5 7106.3 7046.4 6857 8750.6 7564.8 8547.2 7511 6381 5445.7 FALSE TRUE 6210.187482 6643.678578 6568.11 7385.127328 8402.045072 7993.112439 7977.031883 7445.332119 7044.327785 6120.354429 1.014677753 1.08550553 1.073158438 1.206650271 1.372803678 1.30598849 1.3033611 1.216487085 1.150967296 1 12.57939949 -5.795658013 3.864154934 1.247144191 1.057099071 0.359442357 0.098260142 0.209423342 6.629574165 0.027812231 0.045397743 1.60E-06 5.795658013 -0.19004512 RIEQHYFEDR ddPTM_A459_MK2206_30min_R2 3 RIEQHYFEDR 10 1 C9JNK6;O75431-2;O75431 C9JNK6 MTX2 Metaxin-2 0 ;; 132.25 0.0016682 21492000 50883 67538 62198 63246 72904 67966 64799 54241 65395 60032 FALSE TRUE 54778.6416 64184.16113 64271.65028 58078.59949 70041.42265 70552.49376 56290.81346 61330.48494 71082.93889 58073.16076 0.943269505 1.10522934 1.106735873 1.000093653 1.206089383 1.214889853 0.969308588 1.05609001 1.224023938 1 15.82558394 -4.760276362 24.82563521 1.100018424 0.943269309 0.214354085 0.08882542 43.09325863 919426.5467 0.022104813 0.132562574 1.74E-05 4.760276362 -0.156749115 RIEYIEAR ddPTM_A459_MK2206_30min_R1 2 RIEYIEAR 8 1 Q8WUW1;Q8WUW1-2 Q8WUW1 BRK1 Protein BRICK1 0 ; 140.45 0.0031672 5950600 3201.7 3420.9 3152.77 3024.9 3656 3465.9 3474.4 3051.98 2631.3 2932.8 FALSE TRUE 2929.378602 3198.198788 2938.768757 3257.878322 3510.373778 3662.136263 3242.629115 3025.296861 2904.833051 3296.137406 0.88873073 0.970286852 0.891579566 0.988392752 1.06499619 1.111038714 0.983766365 0.91783093 0.881283968 1 11.68656067 -2.109096115 22.65621122 0.972822488 0.199484839 0 0.07333633 0 0 0.018481893 0 0.007778644 2.109096115 -0.773337649 RIEYIEAR ddPTM_A459_MK2206_30min_R2 1 RIEYIEAR 8 1 Q8WUW1;Q8WUW1-2 Q8WUW1 BRK1 Protein BRICK1 0 131.62 0.0047664 2133100 9992.2 13975 11414 10834 9145.8 11492 12326 8953 9002 10886 FALSE TRUE 10757.21051 13281.02182 11794.53706 9948.827544 8786.689938 11929.33611 10707.58139 10123.18784 9784.977688 10530.79071 1.021500741 1.261160931 1.120004887 0.944736992 0.834380834 1.132805355 1.016787978 0.961294182 0.929177871 1 13.36232615 -5.685893685 5.508552435 0.975295623 1.15158583 0.402258586 0.089183827 0.194019492 10.21595131 0.024686278 0.043057146 2.06E-06 5.685893685 0.176290207 RILSDVT(ph)HSAVFGVPASK ddPTM_A459_MK2206_30min_R1 2 RILSDVTHSAVFGVPASK 18 1 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 1 RILS(0.305)DVT(0.685)HS(0.01)AVFGVPASK;RILS(0.38)DVT(0.602)HS(0.018)AVFGVPASK 79.237 0.015309 36747000 13409.5 13672.7 14809.6 14557.1 17366.1 13971.6 12412.9 15805.9 7398.5 4557.3 TRUE FALSE 12268.95161 12782.60474 13804.36561 15678.29036 16674.37146 14762.65992 11584.85809 15667.71068 8167.600551 5121.89273 2.395394097 2.495679902 2.695168826 3.061034503 3.2555097 2.882266517 2.261831456 3.058968922 1.594644984 1 12.32246132 -8.429929331 3.666864528 1.012360224 2.764068653 0.794979571 0.304099594 0.096807611 2.339211745 0.312750924 0.082628477 3.72E-09 8.429929331 1.75170843 RINPPSSGGTSSS(ph)PIK ddPTM_A459_MK2206_30min_R1 1 RINPPSSGGTSSSPIK 16 1 A0A0C4DG88;P14859-4;P14859-5;P14859-3;P14859;P14859-2;P14859-6;A0A0A0MT46 A0A0C4DG88 POU2F1 "POU domain protein;POU domain, class 2, transcription factor 1" 1 RINPPS(0.001)SGGTS(0.001)S(0.033)S(0.965)PIK 119.65 0.0036964 0 2416.2 2348.9 2028.5 2351.7 2086.2 1541.6 2063.3 2157.7 1836.8 1392.6 TRUE FALSE 2210.689502 2195.986183 1890.811072 2532.828341 2003.102236 1628.88406 1925.661022 2138.835456 2027.741933 1565.125802 1.412467611 1.403073274 1.208088877 1.61829058 1.279834652 1.040736826 1.230355426 1.366558173 1.295577602 1 10.61206291 -6.513953099 24.91365105 1.206509392 1.402190532 0.366376414 0.137377271 515.0995549 1437772.388 0.044460535 0.046733005 3.06E-07 6.513953099 0.195681141 RINPPSSGGTSSS(ph)PIK ddPTM_A459_MK2206_30min_R2 1 RINPPSSGGTSSSPIK 16 1 A0A0C4DG88;P14859-4;P14859-5;P14859-3;P14859;P14859-2;P14859-6;A0A0A0MT46 A0A0C4DG88 POU2F1 "POU domain protein;POU domain, class 2, transcription factor 1" 1 RINPPS(0.001)S(0.003)GGT(0.065)S(0.065)S(0.413)S(0.452)PIK 104.16 0.01561 0 5687.8 8837.8 5205.8 7845.4 8114.4 8292.7 8673.7 6573.4 7693.5 6408.9 TRUE FALSE 6123.262341 8398.927703 5379.358774 7204.405724 7795.787884 8608.284509 7534.832771 7432.56595 8362.666723 6199.778118 0.987658304 1.35471424 0.867669564 1.16204251 1.257430143 1.388482676 1.215339102 1.198843863 1.348865486 1 12.59800087 -6.001737855 24.97247261 1.247682838 1.084546068 0.191059872 0.149782903 106.4560099 1529799.834 0.040527001 0.059109966 9.96E-07 6.001737855 -0.163136769 RIPSIVSS(ph)PLNSPLDR ddPTM_A459_MK2206_30min_R1 1 RIPSIVSSPLNSPLDR 16 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 RIPS(0.001)IVS(0.072)S(0.927)PLNSPLDR 94.176 0.0048376 43724000 2032.5 2091.6 1840.4 1714.6 2182.7 2011.7 1752.2 1757.1 1560.7 1219.1 TRUE FALSE 1859.625202 1955.43646 1715.478776 1846.658789 2095.758437 2125.600716 1635.313935 1741.73786 1722.94035 1370.131312 1.357260568 1.42718909 1.252054282 1.34779694 1.529604075 1.551384672 1.193545408 1.27121966 1.257500165 1 10.42009845 -8.539253363 0.801108374 1.007064424 1.395312579 0.573830654 0.101218326 0.553495612 0.793981434 0.106097265 0.038957301 2.89E-09 8.539253363 0.388248155 RIPVS(ph)PEQAR ddPTM_A459_MK2206_30min_R2 1 RIPVSPEQAR 10 1 C9J7L6;Q9H981-2;Q9H981 C9J7L6 ACTR8 Actin-related protein 8 1 RIPVS(1)PEQAR 84.734 0.019228 10488000 9492.5 11363 10534 14416 10736 15679 15332 11870 10448 12937 TRUE FALSE 10219.2531 10798.72994 10885.1983 13238.16669 10314.4507 16275.67533 13318.88998 13421.44976 11356.74815 12514.86675 0.81656907 0.862872147 0.869781398 1.057795257 0.82417583 1.300507281 1.064245449 1.072440484 0.907460573 1 13.61135531 -5.759357993 1.15512693 1.054826796 0.82019175 0.325649964 0.118114471 0.626054005 1.623934787 0.042904007 0.117251 1.74E-06 5.759357993 -0.234635046 RIPYAPSGEIPK ddPTM_A459_MK2206_30min_R1 1 RIPYAPSGEIPK 12 1 O60701;O60701-2;O60701-3 O60701 UGDH UDP-glucose 6-dehydrogenase 0 91.093 0.03181 10173000 4036.4 4550.6 5097 4341.9 4552 4052.2 4453.7 4304.2 3964.2 3859.3 FALSE TRUE 3693.082984 4254.355113 4751.029841 4676.31389 4370.684201 4281.632062 4156.601799 4266.568833 4376.292776 4337.41922 0.851447093 0.980849417 1.095358691 1.078132791 1.007669303 0.987138168 0.95831221 0.983665313 1.00896237 1 12.08262117 -4.796988279 3.990084986 1.01460174 0.839471254 0.600232008 0.039841724 0.170521292 5.008509682 0.011502762 0.083220659 1.60E-05 4.796988279 -0.175130486 RIQDPTEDAEAEDT(ph)PR ddPTM_A459_MK2206_30min_R2 1 RIQDPTEDAEAEDTPR 16 1 O96028-3;O96028;H0Y9L4;O96028-5 O96028-3;O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 RIQDPTEDAEAEDT(1)PR 103.73 0.0052976 6838800 13125 17688 15762 15411 17861 18790 18840 16809 19548 14993 TRUE FALSE 14129.86009 16809.63964 16287.49721 14151.872 17159.6874 19505.06662 16366.28537 19005.99401 21248.24971 14503.77964 0.974219165 1.158983386 1.122982948 0.975736832 1.18311832 1.344826459 1.128415198 1.310416629 1.465014654 1 13.82414129 -6.502294288 7.706402363 1.262006279 1.070676676 0.3271888 0.128751866 0.227770328 66.23311056 0.039715798 0.043277658 3.15E-07 6.502294288 -0.191329602 RIS(ph)ACLSDYSLASDSGVFEPLTK ddPTM_A459_MK2206_30min_R2 1 RISACLSDYSLASDSGVFEPLTK 23 1 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 RIS(0.668)ACLS(0.179)DY(0.122)S(0.015)LAS(0.016)DS(0.001)GVFEPLTK 64.633 0.002397 855390 8120.4 10225 9499.8 10748 9935 10405 10816 9446.2 11130 8114.3 TRUE FALSE 8742.104068 9717.241369 9816.518591 9869.854019 9544.901981 10800.96957 9395.846208 10680.85077 12098.06728 7849.531056 1.113710361 1.237939095 1.25058663 1.257381358 1.215983721 1.37600189 1.19699459 1.360699219 1.541247139 1 12.93839075 -3.079604042 0.568392542 1.301577122 1.50E-09 0.109330477 0.132778372 47.76648759 2.485242037 0.062282895 62.38500101 0.000832522 3.079604042 -1.30157712 RIS(ph)EMEEELK ddPTM_A459_MK2206_30min_R1 1 RISEMEEELK 10 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RIS(1)EMEEELK 156.52 0.0002605 3563800 1848.7 2173.5 1943.1 2215.2 1729.2 1571.2 1812.6 1973.5 1914.9 2033.7 TRUE FALSE 1691.458357 2032.004755 1811.207786 2385.815088 1660.322302 1660.159986 1691.684761 1956.245898 2113.960708 2285.65011 0.740033809 0.889027042 0.792425655 1.043823408 0.726411403 0.726340387 0.740132864 0.855881611 0.924883778 1 11.15838886 -8.371937781 2.299677837 0.995170219 0.813414545 0.310677813 0.092789676 0.371838814 3.863668283 0.091153903 0.025481593 4.25E-09 8.371937781 -0.181755674 RIS(ph)FSASHR ddPTM_A459_MK2206_30min_R1 1 RISFSASHR 9 1 E9PKY8;E9PJM0;Q03393 E9PKY8 PTS 6-pyruvoyl tetrahydrobiopterin synthase 1 RIS(0.999)FS(0.001)ASHR 107.34 0.0064907 4242800 1403.4 939.29 1232.6 904.15 2789.7 2234.8 2652.6 1926 1193.5 912.32 TRUE FALSE 1284.03346 878.1420503 1148.934546 973.7877897 2678.580342 2361.332445 2475.649894 1909.161185 1317.568596 1025.345089 1.252293958 0.856435613 1.120534499 0.949717124 2.612369601 2.302963626 2.414455309 1.861969404 1.285000152 1 10.00189383 -6.239910424 24.63885548 2.000483142 1.036707986 0.437776498 0.47570064 590.5230252 675824.9775 0.141590464 0.182605616 5.76E-07 6.239910424 -0.963775156 RIS(ph)FSASHR ddPTM_A459_MK2206_30min_R2 2 RISFSASHR 9 1 E9PKY8;E9PJM0;Q03393 E9PKY8 PTS 6-pyruvoyl tetrahydrobiopterin synthase 1 RIS(0.992)FS(0.008)ASHR;RIS(0.996)FS(0.003)AS(0.001)HR 82.505 0.021136 36393300 100458 134169 138997 146825 124011 141268 134224 126404 132677 119216 TRUE FALSE 108149.1417 127506.3626 143631.0906 134828.9278 119141.705 146644.0527 116600.2276 142925.4368 144217.0056 115325.9917 0.937769016 1.105616875 1.245435556 1.169111367 1.033086326 1.271561168 1.011048991 1.239316781 1.250516068 1 16.81535817 -4.806207351 3.680273524 1.157555815 0.919822211 0.294377253 0.09911601 0.293118359 6.834961629 0.023760485 0.182853478 1.56E-05 4.806207351 -0.237733605 RIS(ph)GLIYEETR ddPTM_A459_MK2206_30min_R1 2 RISGLIYEETR 11 1 P62805 P62805 HIST1H4A Histone H4 1 RIS(1)GLIYEETR;RIS(1)GLIYEETR 118.52 0.002713 46204000 6187.5 5737.5 5855.8 4603.4 6194 6218.2 6164.4 6084.1 5072.8 4840.1 TRUE FALSE 5661.220633 5363.987707 5458.324611 4957.954666 5947.279864 6570.26911 5753.184124 6030.907355 5600.135713 5439.728129 1.040717569 0.986076433 1.003418642 0.911434275 1.093304614 1.20783042 1.057623467 1.108678083 1.029488162 1 12.40931883 -6.294058448 23.44128834 1.093245357 0.986745426 0.378827611 0.060216038 294.3238951 211511.2008 0.018563574 0.021051449 5.08E-07 6.294058448 -0.106499931 RIS(ph)GLIYEETR ddPTM_A459_MK2206_30min_R2 1 RISGLIYEETR 11 1 P62805 P62805 HIST1H4A Histone H4 1 RIS(1)GLIYEETR 65.528 0.041198 8514500 11300 13576 13384 14906 16108 16268 10822 9649.3 11370 10740 TRUE FALSE 12165.13669 12901.83558 13830.21588 13688.13212 15475.51898 16887.09014 9401.0584 10910.49664 12358.94205 10389.55468 1.170900685 1.241808333 1.331165416 1.317489781 1.489526689 1.625391141 0.904856723 1.050140933 1.189554551 1 13.3428462 -7.27654839 24.95071369 1.040316462 1.359492573 0.584398728 0.134884184 653.3085685 1078856.428 0.061167053 0.041421808 5.29E-08 7.27654839 0.319176111 RIS(ph)HSLYSGIEGLDESPSR ddPTM_A459_MK2206_30min_R2 2 RISHSLYSGIEGLDESPSR 19 1 F5GZI3;B1AP52;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RIS(0.801)HS(0.183)LY(0.014)S(0.002)GIEGLDESPSR;RIS(0.655)HS(0.342)LY(0.001)S(0.001)GIEGLDESPSR 73.76 0.0054678 17446800 8675.3 18042 19964.9 20127.8 19775.4 18531.8 18379.2 14894.5 21113 15008.2 TRUE FALSE 9339.487638 17146.06052 20630.5198 18483.29435 18998.91843 19237.04063 15965.98896 16841.26229 22949.37058 14518.48366 0.643282581 1.180981493 1.420983092 1.273087106 1.308602115 1.325003429 1.099700859 1.159987688 1.580700238 1 13.82560316 -4.773792829 3.928850908 1.275571637 0.579251718 0.594762741 0.154425937 0.159147046 4.536854365 0.037215397 0.321819884 1.68E-05 4.773792829 -0.696319919 RIS(ph)LSDMPR ddPTM_A459_MK2206_30min_R1 4 RISLSDMPR 9 1 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;A0A087WYS3;Q9ULU4-8;Q9ULU4-17;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 RIS(0.768)LS(0.232)DMPR;RIS(0.64)LS(0.36)DMPR;RIS(0.804)LS(0.196)DMPR;RIS(0.895)LS(0.105)DMPR 96.82 0.010854 33438200 7258.13 6900.47 7191.35 4272.04 5464.32 4042.37 4537.8 3851.45 4243.19 3366.56 TRUE FALSE 6640.78793 6451.248149 6703.221198 4601.073261 5246.664564 4271.245496 4235.091642 3817.777179 4684.284785 3783.634869 1.755134457 1.705039829 1.771635327 1.216045792 1.386673066 1.128873595 1.119318272 1.00902368 1.238038275 1 11.88555716 -5.939472056 0.997827043 1.095429351 1.805950822 0.843965382 0.114333066 0.211249761 0.42100074 0.045536373 0.106025775 1.15E-06 5.939472056 0.710521472 RIS(ph)LSDMPR ddPTM_A459_MK2206_30min_R2 4 RISLSDMPR 9 1 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;A0A087WYS3;Q9ULU4-8;Q9ULU4-17;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 RIS(0.879)LS(0.121)DMPR;RIS(0.665)LS(0.335)DMPR;RIS(0.765)LS(0.235)DMPR;RIS(0.871)LS(0.129)DMPR 92.247 0.014188 78322000 80855 87628 81007 89804 67730 63643 58180.6 50934.6 46343.7 44709.1 TRUE FALSE 87045.32097 83276.52094 83707.73295 82466.72593 65070.57988 66064.97896 50541.41733 57591.9271 50374.59126 43250.24573 2.012597143 1.925457753 1.935427916 1.906734275 1.50451353 1.527505286 1.168581045 1.331597685 1.164723816 1 15.40042071 -6.683582132 0.671432176 1.095737872 2.041423294 0.938874498 0.088364521 0.168317424 0.167882351 0.064613486 0.073378613 2.07E-07 6.683582132 0.945685423 RIS(ph)QSQPVR ddPTM_A459_MK2206_30min_R1 4 RISQSQPVR 9 1 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 RIS(0.5)QS(0.5)QPVR;RIS(0.5)QS(0.5)QPVR;RIS(0.5)QS(0.5)QPVR;RIS(0.5)QS(0.5)QPVR 120.03 0.012046 148007000 15671.4 15211.6 15096.1 12841.8 16009.8 14647.4 15997.9 14520.2 11907.9 12098.2 TRUE FALSE 14338.46514 14221.32208 14071.41879 13830.87766 15372.09576 15476.72313 14930.70928 14393.25142 13145.76882 13597.01635 1.054530256 1.045914906 1.034890187 1.017199458 1.130549186 1.138244062 1.098087175 1.058559543 0.966812753 1 13.73100249 -8.175460547 4.902086861 0.983904584 1.074165012 0.468534287 0.038036069 0.210524187 8.417728329 0.031833015 0.011213476 6.68E-09 8.175460547 0.090260428 RIS(ph)QSQPVR ddPTM_A459_MK2206_30min_R2 3 RISQSQPVR 9 1 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 RIS(0.5)QS(0.5)QPVR;RIS(0.5)QS(0.5)QPVR;RIS(0.5)QS(0.5)QPVR 101.72 0.029175 136556000 53958.9 68755 58053.1 71717 65708 83130 66225 74250 95233 53152 TRUE FALSE 58090.03487 65340.72668 59988.56138 65857.49169 63127.97376 86293.5704 57529.57795 83954.72994 103516.1942 51417.65459 1.129768274 1.270783881 1.166691905 1.280834223 1.227748995 1.678286789 1.118868187 1.632799679 2.013242242 1 15.64997618 -6.631031272 1.088183897 1.528424878 1.189078945 0.169522187 0.275152734 0.823584789 2.083842068 0.137684198 0.141888011 2.34E-07 6.631031272 -0.339345933 RIS(ph)QVSSGETEYNPTEAR ddPTM_A459_MK2206_30min_R2 3 RISQVSSGETEYNPTEAR 18 1 H7C3Y7;H0Y764;A0A494C1V1;Q6ZNJ1-2;Q6ZNJ1-3;Q6ZNJ1 H7C3Y7 NBEAL2 Neurobeachin-like protein 2 1 RIS(1)QVSSGETEYNPTEAR;RIS(1)QVSSGETEYNPTEAR;RIS(0.998)QVS(0.002)SGETEYNPTEAR 237.66 1.27E-24 23097400 45089.4 60519 52559 54747 46946 45268 49737 40243 46904 53807 TRUE FALSE 48541.47913 57513.71446 54311.29083 50273.99497 45102.66416 46990.70546 43206.47216 45502.89827 50983.62514 52051.282 0.93257029 1.104943284 1.043418889 0.965855077 0.866504386 0.902777101 0.830075082 0.874193613 0.979488366 1 15.66764608 -5.985995309 3.628414949 0.898720814 1.033738381 0.413152457 0.062229973 0.192477725 5.493289131 0.018067637 0.02653344 1.03E-06 5.985995309 0.135017567 RIS(ph)SSSVQPCSEEVSTPQDSLAQCK ddPTM_A459_MK2206_30min_R1 1 RISSSSVQPCSEEVSTPQDSLAQCK 25 1 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 RIS(0.442)S(0.175)S(0.175)S(0.07)VQPCS(0.136)EEVS(0.001)TPQDSLAQCK 69.088 0.00073362 11248000 1919.4 2009.6 2117.6 2041.4 2026.8 1357.4 1545.2 1776 1372.7 1479.2 TRUE FALSE 1756.144951 1878.774675 1973.863212 2198.628982 1946.068264 1434.254815 1442.122527 1760.472619 1515.397077 1662.454463 1.056356724 1.130120984 1.187318664 1.322519822 1.17059944 0.862733294 0.867465882 1.058959904 0.911542006 1 10.69909911 -6.748190047 24.49416089 0.939283081 1.180039335 0.666215097 0.082479248 114.68234 212013.7475 0.029104794 0.028930847 1.79E-07 6.748190047 0.240756254 RIS(ph)TSDILSEK ddPTM_A459_MK2206_30min_R1 1 RISTSDILSEK 11 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 RIS(0.789)T(0.198)S(0.013)DILSEK 82.349 0.020616 8263100 3657.7 3535.8 3288.1 3058.4 2987.7 2424 2639 2232.5 2162.7 1833.6 TRUE FALSE 3346.593408 3305.618777 3064.912933 3293.958498 2868.693582 2561.244785 2462.957125 2212.981488 2387.520404 2060.760211 1.623960609 1.60407735 1.487272957 1.598419108 1.392055984 1.242864052 1.195169196 1.073866564 1.158562938 1 11.00896093 -6.776092778 0.845334924 1.064368452 1.610629127 0.943292617 0.052780282 0.12741577 0.198002543 0.033568601 0.031151805 1.67E-07 6.776092778 0.546260674 RIS(ph)TSDILSEK ddPTM_A459_MK2206_30min_R2 4 RISTSDILSEK 11 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 RIS(0.865)T(0.133)S(0.002)DILSEK;RIS(0.853)T(0.144)S(0.003)DILSEK;RIS(0.977)T(0.021)S(0.002)DILSEK;RIS(0.73)T(0.209)S(0.06)DILSEK 169.98 0.00020006 22416100 203252 225040 190156 205028 166711 133365 155305 118881 102808 115854 TRUE FALSE 218813.1294 213864.8408 196495.7061 188276.5565 160165.0885 138440.2985 134913.2669 134419.1549 111750.054 112073.6935 1.952404018 1.908251921 1.753272334 1.679935324 1.429105114 1.23526132 1.203790674 1.19938186 0.997112262 1 16.77408816 -6.254300132 0.575119137 1.019328315 2.059498641 0.981573609 0.046685468 0.131428525 0.08886877 0.035662634 0.073234096 5.57E-07 6.254300132 1.040170326 RISACLS(ph)DYSLASDSGVFEPLTK ddPTM_A459_MK2206_30min_R1 1 RISACLSDYSLASDSGVFEPLTK 23 1 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 RIS(0.31)ACLS(0.598)DY(0.07)S(0.019)LAS(0.001)DSGVFEPLTK 56.854 0.0086826 12638000 4005.8 4080.7 4190.6 3416.2 5130.3 3994.9 4694.3 4061.9 4154.6 3871.6 TRUE FALSE 3665.085675 3815.045688 3906.153748 3679.316316 4925.949287 4221.087786 4381.151812 4026.387237 4586.485537 4351.243037 0.842307737 0.876771455 0.897709853 0.845578214 1.132078637 0.9700878 1.006873616 0.92534184 1.054063287 1 12.08721188 -6.229887827 24.98986526 1.008381961 0.868684483 0.655106644 0.052877032 435.1052212 344617.5422 0.015295908 0.019744826 5.89E-07 6.229887827 -0.139697479 RISACLS(ph)DYSLASDSGVFEPLTK ddPTM_A459_MK2206_30min_R2 1 RISACLSDYSLASDSGVFEPLTK 23 1 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 RIS(0.176)ACLS(0.637)DY(0.152)S(0.028)LAS(0.006)DSGVFEPLTK 83.905 0.00016689 3493700 10956 12798 10029 13498 11401 11924 12687 10234 13377 11502 TRUE FALSE 11794.79978 12162.46993 10363.36185 12395.17022 10953.33945 12377.77618 11021.18166 11571.61894 14540.50728 11126.69068 1.060045626 1.093089606 0.931396599 1.114003308 0.984420235 1.112440035 0.990517484 1.039987474 1.306813292 1 13.44173695 -8.101411266 24.85040548 1.160074504 1.040095058 0.204950762 0.088561836 50.24381659 12302.82947 0.054089147 0.020443777 7.92E-09 8.101411266 -0.119979446 RISGLIYEETR ddPTM_A459_MK2206_30min_R1 2 RISGLIYEETR 11 1 P62805 P62805 HIST1H4A Histone H4 0 ; 124.38 0.0048579 12673400 7663.9 7587.1 7549.8 7785.6 7652.5 6654.4 6366.5 7200.8 5202 6561 FALSE TRUE 7012.04506 7093.178411 7037.340611 8385.248261 7347.684721 7031.166377 5941.802401 7137.844165 5742.766516 7373.826213 0.95093712 0.961940003 0.954367571 1.137163803 0.996454827 0.953530253 0.805796371 0.967997341 0.778804158 1 12.8481977 -7.011824314 5.099805484 0.884162955 1.001320396 0.307233809 0.079086297 0.219314582 16.86024491 0.029223344 0.023920042 9.73E-08 7.011824314 0.117157441 RISSSSVQPCS(ph)EEVSTPQDSLAQCK ddPTM_A459_MK2206_30min_R1 1 RISSSSVQPCSEEVSTPQDSLAQCK 25 1 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 RIS(0.27)S(0.101)S(0.143)S(0.054)VQPCS(0.432)EEVSTPQDSLAQCK 89.299 3.04E-05 10608000 2472.1 2121 2191 1593.4 1937.4 1632.7 1802.5 1735.4 1329.4 1755.9 TRUE FALSE 2261.834913 1982.922514 2042.281024 1716.123944 1860.229255 1725.142063 1682.258514 1720.227581 1467.595887 1973.434148 1.14614157 1.004808048 1.034886837 0.869612977 0.942635586 0.874182736 0.852452318 0.871692416 0.743676139 1 10.94649266 -4.743102212 0.595015517 0.856919094 1.324325967 0.615693715 0.067655819 2.415624518 0.628056182 0.033005224 0.788069893 1.81E-05 4.743102212 0.467406873 RISSSSVQPCS(ph)EEVSTPQDSLAQCK ddPTM_A459_MK2206_30min_R2 2 RISSSSVQPCSEEVSTPQDSLAQCK 25 1 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 RIS(0.126)S(0.049)S(0.067)S(0.067)VQPCS(0.69)EEVSTPQDSLAQCK;RIS(0.244)S(0.244)S(0.046)S(0.046)VQPCS(0.415)EEVS(0.004)T(0.001)PQDSLAQCK 80.56 9.85E-05 69756000 122152 140413 144252 158725 150713 147006 151737 101780 105252 136856 TRUE FALSE 131504.051 133440.2946 149061.2897 145756.6598 144795.2503 152600.4163 131813.7496 115082.9955 114406.6287 132390.3999 0.993305037 1.007930293 1.125922195 1.100960945 1.093699018 1.152654697 0.995644319 0.869269943 0.864161063 1 17.01443899 -7.542569186 4.690914411 0.902637781 1.07972571 0.632170504 0.057427401 0.122074116 6.909751141 0.028685774 0.016734834 2.87E-08 7.542569186 0.17708793 RITYHNWR ddPTM_A459_MK2206_30min_R1 1 RITYHNWR 8 1 P35913-3;P35913-2;P35913 P35913-3 PDE6B "Rod cGMP-specific 3,5-cyclic phosphodiesterase subunit beta" 0 95.815 0.0292 38009000 3782.7 3859 3844 3863.1 4095.8 4218.4 4054.4 3636.4 3053.6 2355.9 FALSE TRUE 3460.961501 3607.778399 3583.07999 4160.636631 3932.655613 4457.242163 3783.938374 3604.607338 3371.032647 2647.766678 1.307124804 1.362574138 1.353246122 1.571375856 1.485272719 1.683396879 1.42910567 1.361376502 1.273160764 1 11.37056028 -10.08887321 7.482244409 1 1.433124949 0.532302775 0.119354664 0 0 0.125518303 0.03044266 8.15E-11 10.08887321 0.433124949 RIVLVDDR ddPTM_A459_MK2206_30min_R2 1 RIVLVDDR 8 1 O15067 O15067 PFAS Phosphoribosylformylglycinamidine synthase 0 88.177 0.042532 2540700 4912.8 4281.8 4318.4 7539.9 6676.4 7547 6905.7 4591.7 4726.2 6699.9 FALSE TRUE 5288.927745 4069.172038 4462.373301 6923.866051 6414.25099 7834.206373 5998.973295 5191.850956 5137.276333 6481.282812 0.816031008 0.627834359 0.688501556 1.068286364 0.98965763 1.208743176 0.925584251 0.801052987 0.792632644 1 12.66206367 -5.750122075 24.98538701 0.970121215 0.70249341 0.485597941 0.121894064 198.3148717 437818.7817 0.036472107 0.062454031 1.78E-06 5.750122075 -0.267627806 RIVS(ph)DGEDEDDSFK ddPTM_A459_MK2206_30min_R2 1 RIVSDGEDEDDSFK 14 1 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 RIVS(1)DGEDEDDSFK 79.88 0.018032 3245500 22619 24104 22136 21529 21236 21593 24144 15099 18766 23597 TRUE FALSE 24350.72803 22907.03041 22874.00319 19770.01183 20402.16794 22414.73675 20973.8638 17072.49114 20398.23276 22827.03182 1.066749642 1.003504555 1.002057708 0.866078953 0.893772265 0.981938297 0.918816952 0.747906748 0.893599874 1 14.47845566 -5.660125149 4.662132653 0.89383161 1.027681734 0.423293713 0.066354389 0.205784132 7.558317332 0.01910575 0.033828389 2.19E-06 5.660125149 0.133850124 RKADGEDAGAESNEEAPGEPS(ph)AGSSEEAPGEPSAGSSEEAPGER ddPTM_A459_MK2206_30min_R2 1 RKADGEDAGAESNEEAPGEPSAGSSEEAPGEPSAGSSEEAPGER 44 2 Q8N8A6 Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 1 RKADGEDAGAES(0.187)NEEAPGEPS(0.546)AGS(0.187)S(0.079)EEAPGEPS(0.001)AGSSEEAPGER 51.23 0.00050731 8187300 4820.1 8764.4 5347 4916.9 7432.1 7655.4 7342.5 2527.9 8261.4 7747.7 TRUE FALSE 5189.130562 8329.172641 5525.266311 4515.173542 7140.278411 7946.731611 6378.42093 2858.30521 8979.961639 7494.893184 0.692355506 1.111313055 0.737204144 0.602433341 0.952685814 1.060286173 0.851035602 0.381367037 1.198144045 1 12.8716922 RKAS(ph)PEPEGEAAGK ddPTM_A459_MK2206_30min_R1 2 RKASPEPEGEAAGK 14 2 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK 68.262 0.025007 14984200 15574 16502.1 17948.1 16104 14873.1 13293.8 14539.8 16142.2 6479.7 10613.9 TRUE FALSE 14249.34952 15427.81029 16729.83298 17344.33287 14280.67293 14046.48347 13569.87647 16001.07045 7153.288003 11928.83006 1.194530347 1.293321324 1.40247056 1.453984404 1.197156205 1.177523981 1.13756977 1.34137802 0.599663837 1 13.54216494 -8.251365145 24.9774548 0.799831911 1.275194348 0.674574568 0.131941361 345.2161064 855913.4752 0.092709268 0.034134535 5.61E-09 8.251365145 0.475362436 RKAS(ph)PEPPDSAEGALK ddPTM_A459_MK2206_30min_R2 1 RKASPEPPDSAEGALK 16 2 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 RKAS(0.996)PEPPDS(0.004)AEGALK 59.281 0.030213 30772000 85920 117830 131430 112050 124850 100980 119620 86934 116230 114450 TRUE FALSE 92498.10126 111978.7335 135811.8106 102895.1566 119947.7617 104822.8647 103913.7503 98296.57229 126339.4753 110715.5059 0.835457514 1.011409673 1.226673803 0.929365365 1.083387198 0.94677673 0.938565466 0.887830223 1.141118169 1 16.75649776 -6.788985603 24.99673393 0.973079221 1.023685041 0.017540998 0.112852788 841.6354191 763732.7474 0.039890025 0.035188187 1.63E-07 6.788985603 0.050605819 RKDDEDSFR ddPTM_A459_MK2206_30min_R1 2 RKDDEDSFR 9 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 0 ; 92.051 0.016748 13787100 4320.1 4759.8 4456.2 4746.2 3192.1 3391.5 4274 5246.1 456.91 2377.8 FALSE TRUE 3952.652809 4449.936155 4153.72556 5111.753146 3064.951898 3583.523799 3988.889258 5200.233901 504.4074296 2672.379815 1.479075986 1.665158571 1.554317068 1.912809368 1.146899808 1.340948535 1.492635603 1.945918717 0.188748406 1 11.38390935 -8.260817315 24.99930876 0.594374184 1.557535334 0.642103102 0.290451141 32.84051731 1319935.055 0.219380404 0.071463077 5.49E-09 8.260817315 0.96316115 RKDPLTHTS(ph)NSLPR ddPTM_A459_MK2206_30min_R2 1 RKDPLTHTSNSLPR 14 2 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5 A0A2R8Y7K2 SPAST Spastin 1 RKDPLTHT(0.145)S(0.427)NS(0.427)LPR 82.942 0.011275 17997000 25389 65214 38176 76505 70204 104360 63197 42292 68121 40226 TRUE FALSE 27332.80136 61975.56759 39448.76879 70254.29677 67447.43821 108331.4929 54899.15799 47819.70961 74046.04145 38913.42891 0.702400228 1.592652442 1.013757201 1.8053998 1.733268954 2.783910232 1.410802376 1.22887422 1.902840318 1 15.24798049 -4.544904263 0.938610931 1.712263859 7.83E-11 0.222503792 0.496298048 4.768006982 2.472236663 0.171317078 9.239674791 2.85E-05 4.544904263 -1.712263859 RKDPLTHTSNS(ph)LPR ddPTM_A459_MK2206_30min_R2 1 RKDPLTHTSNSLPR 14 2 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5 A0A2R8Y7K2 SPAST Spastin 1 RKDPLT(0.004)HT(0.004)S(0.046)NS(0.946)LPR 92.633 0.0060502 8228500 34037 81087 41784 100310 91911 144570 79176 42991 91257 48202 TRUE FALSE 36642.89889 77060.33749 43177.05771 92114.35212 88302.11232 150071.7127 68780.09609 48610.07131 99194.36891 46629.17269 0.78583635 1.652620732 0.925966626 1.975466147 1.893709608 3.21840822 1.475044315 1.042481959 2.127302785 1 15.50894521 -5.768604364 24.99657175 1.867786866 1.174589159 0.202091665 0.627190474 267.4500454 933059.072 0.181017768 0.274922872 1.70E-06 5.768604364 -0.693197706 RKDT(ph)DDIES(ph)PKR ddPTM_A459_MK2206_30min_R1 1 RKDTDDIESPKR 12 3 Q9UPQ0-8;G5EA03;Q9UPQ0-5;Q9UPQ0-3;D6RJ93;Q9UPQ0-7;D6R8Y0;D6RGH8 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 2 RKDT(1)DDIES(1)PKR 85.28 0.018645 0 2727.6 2823.5 2532.4 2255.9 3041.4 2911.6 2605.9 2496 2535.8 2204.5 TRUE FALSE 2495.603297 2639.689637 2360.507744 2429.649809 2920.254598 3076.452276 2432.065166 2474.177735 2799.405484 2477.610103 1.007262318 1.065417692 0.95273576 0.980642517 1.17865785 1.241701538 0.981617391 0.998614646 1.129881365 1 11.27473346 -4.757650775 23.32389832 1.060055501 1.007262164 0.027738268 0.091282163 244.9278467 1507305.449 0.024410551 0.173775639 1.75E-05 4.757650775 -0.052793337 RKEDEVEEWQHR ddPTM_A459_MK2206_30min_R1 3 RKEDEVEEWQHR 12 2 P15311;E7EQR4 P15311 EZR Ezrin 0 ;; 97.452 0.0079537 37937700 9367.5 9561.7 11299.8 11214.6 9721.4 8527.1 11000.1 8926.9 8161.3 6918.2 FALSE TRUE 8570.744934 8939.231592 10532.80106 12078.35044 9334.176053 9009.897033 10266.3034 8848.853054 9009.69634 7775.278846 1.102307082 1.149699164 1.354652517 1.553429874 1.200494058 1.158787641 1.32037752 1.138075332 1.15876183 1 12.9246787 -8.449344068 0.83962773 1.002847691 1.272663151 0.291258703 0.125085601 0.863051687 1.36226153 0.130384506 0.047453038 3.55E-09 8.449344068 0.26981546 RKEDEVEEWQHR ddPTM_A459_MK2206_30min_R2 4 RKEDEVEEWQHR 12 2 P15311;E7EQR4 P15311 EZR Ezrin 0 ;;; 108.35 0.0051361 132845000 153487 219570 190732 175858 211810 173807 176815 135931 155801 145680 FALSE TRUE 165238.0827 208666.4731 197090.9097 161489.8389 203493.2751 180421.3472 153598.9781 153697.6484 169352.2894 140926.4735 1.17251272 1.480676184 1.398537157 1.14591556 1.443967695 1.280251628 1.089922811 1.090622965 1.201706714 1 17.10458313 -7.179658962 4.226204307 1.102697004 1.332758354 0.503404662 0.109776971 0.194275425 6.418561841 0.042956414 0.032404441 6.61E-08 7.179658962 0.23006135 RKELEEVS(ph)PETPVVPATTQR ddPTM_A459_MK2206_30min_R1 3 RKELEEVSPETPVVPATTQR 20 2 Q15149 Q15149 PLEC Plectin 1 RKELEEVS(0.999)PET(0.001)PVVPATTQR;RKELEEVS(0.998)PET(0.002)PVVPATTQR;RKELEEVS(0.655)PET(0.345)PVVPATTQR 112.74 0.00036176 41731900 9626.5 9864.1 10623.1 10680 10333.2 8315.3 8812.2 9885.1 7538.5 6630.1 TRUE FALSE 8807.715624 9221.945297 9902.03357 11502.57545 9921.606763 8786.1051 8224.354217 9798.675613 8322.154052 7451.486843 1.182007807 1.237598011 1.328866813 1.543661781 1.331493563 1.179107645 1.103719887 1.31499603 1.116844762 1 12.86331261 -6.785041755 5.52702927 1.158580745 1.332782116 0.38356847 0.114354281 0.218351121 18.9769667 0.042381343 0.038637603 1.64E-07 6.785041755 0.174201371 RKELEEVS(ph)PETPVVPATTQR ddPTM_A459_MK2206_30min_R2 2 RKELEEVSPETPVVPATTQR 20 2 Q15149 Q15149 PLEC Plectin 1 RKELEEVS(0.845)PET(0.155)PVVPATTQR;RKELEEVS(0.997)PET(0.003)PVVPATTQR 92.39 0.00055047 37173000 54453 100230 80435 99130 98572 80534 94833 81394 91650 88760 TRUE FALSE 58621.96355 95252.72395 83116.66275 91030.7619 94701.568 83598.7778 82381.31319 92032.47527 99621.55133 85863.76847 0.682732247 1.109347116 0.968006229 1.060176644 1.102928158 0.973621113 0.959442087 1.071842954 1.160228035 1 16.38976187 -4.754880903 24.99920288 1.042274824 0.682731642 0.736892926 0.064932922 116.7356058 444925.0115 0.016390441 0.153007244 1.76E-05 4.754880903 -0.359543182 RKPDTIEVQQMK ddPTM_A459_MK2206_30min_R2 1 RKPDTIEVQQMK 12 2 P15311;E7EQR4;P26038;A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3;P35241-4 P15311;P26038;A0A2R8Y5S7 EZR;MSN;RDX Ezrin;Moesin;Radixin 0 96.604 0.010761 5080300 45271 50024 54012 56737 50436 49930 48792 48453 54474 50151 FALSE TRUE 48736.98257 47539.8809 55812.73312 52101.40561 48455.62922 51830.12114 42385.55179 54785.97346 59212.05005 48514.57698 1.004584304 0.979909212 1.150432233 1.073933008 0.998784948 1.068341195 0.873666317 1.129268292 1.220500182 1 15.56613067 -7.935919763 24.99998172 1.131808925 1.025831569 0.203363401 0.084458255 82.96065667 32365.23668 0.045536494 0.021875019 1.16E-08 7.935919763 -0.105977356 RKPS(ph)PEPEGEVGPPK ddPTM_A459_MK2206_30min_R1 3 RKPSPEPEGEVGPPK 15 2 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK 114.99 0.0027428 190486000 9244.1 9105.4 9966.4 8844.8 9237 8425.5 8586.4 8701.6 8917.6 8553.3 TRUE FALSE 8457.840752 8512.636805 9289.908536 9526.028029 8869.07073 8902.544529 8013.616923 8625.522829 9844.616432 9612.947378 0.879838453 0.885538688 0.966395443 0.990958096 0.922617214 0.926099372 0.833627462 0.897281811 1.02409969 1 13.23076312 -8.263248625 24.99296424 1.012049857 0.914410195 0.467860398 0.042313637 164.920754 2278126.126 0.038381346 0.011913846 5.45E-09 8.263248625 -0.097639662 RKPS(ph)VPDSASPADDSFVDPGER ddPTM_A459_MK2206_30min_R1 3 RKPSVPDSASPADDSFVDPGER 22 2 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333-2;P16333 C9K098 NCK1 Cytoplasmic protein NCK1 1 RKPS(0.996)VPDS(0.003)ASPADDSFVDPGER;RKPS(0.917)VPDS(0.074)AS(0.009)PADDSFVDPGER;RKPS(0.937)VPDS(0.047)AS(0.015)PADDS(0.001)FVDPGER 79.875 0.0014114 56354000 9183.4 8992.6 8321.3 6516.7 6945.5 5730.6 5828.2 5834.7 4722.4 4555.8 TRUE FALSE 8402.303606 8407.180106 7756.47334 7018.617363 6668.846028 6055.06162 5439.411412 5783.687833 5213.310379 5120.206899 1.64100861 1.641961013 1.514874983 1.370768311 1.302456358 1.182581435 1.062342112 1.129580884 1.018183539 1 12.32198639 -6.071292035 0.568964353 1.014105837 1.753921939 0.981433389 0.031992959 0.142268316 0.087174479 0.022472978 0.058641233 8.49E-07 6.071292035 0.739816102 RKPS(ph)VPDSASPADDSFVDPGER ddPTM_A459_MK2206_30min_R2 2 RKPSVPDSASPADDSFVDPGER 22 2 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333-2;P16333 C9K098 NCK1 Cytoplasmic protein NCK1 1 RKPS(0.897)VPDS(0.069)AS(0.034)PADDSFVDPGER;RKPS(0.955)VPDS(0.039)AS(0.005)PADDS(0.001)FVDPGER 89.71 0.00049542 45085000 64051 79006 54373 71274 47507 54444 42590 35718 37876 43057 TRUE FALSE 68954.79381 75082.67693 56185.76868 65450.68621 45641.63648 56515.90457 36997.88184 40386.46524 41170.38602 41652.05362 1.655495656 1.802616448 1.348931536 1.571367568 1.095783581 1.356857578 0.888260689 0.969615223 0.988435922 1 15.34610001 -6.154860632 0.625185999 0.939101173 1.789671168 0.797252407 0.139172017 0.402870819 0.318821507 0.088139407 0.196103517 7.00E-07 6.154860632 0.850569995 RKPVLPALTINPTIAEGPS(ph)PTSEGASEANLVDLQK ddPTM_A459_MK2206_30min_R2 1 RKPVLPALTINPTIAEGPSPTSEGASEANLVDLQK 35 2 P36507 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 RKPVLPALTINPTIAEGPS(0.455)PT(0.455)S(0.083)EGAS(0.007)EANLVDLQK 80.022 1.15E-06 6934500 49091 70396 54790 63613 70213 56882 69937 51590 57821 57000 TRUE FALSE 52849.4447 66900.23701 56616.67125 58415.61441 67456.08483 59046.68437 60754.18789 58332.99013 62850.16606 55140.09467 0.958457635 1.213277514 1.026778637 1.059403593 1.223358161 1.07084844 1.101815081 1.05790515 1.139826952 1 15.75081412 -4.723113277 24.43268409 1.100617164 0.958455816 0.265592669 0.070200818 7927.839828 5053517.74 0.016536858 5.057019543 1.89E-05 4.723113277 -0.142161348 RKQEELQQLEQQR ddPTM_A459_MK2206_30min_R2 2 RKQEELQQLEQQR 13 2 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 82.705 0.020617 7375600 30762 47149 37706 48321 54564 51114 40640 32994 47315 38435 FALSE TRUE 33117.16237 44807.64922 38963.09922 44373.01973 52421.5432 53059.17909 35303.91918 37306.42909 51430.37317 37180.8691 0.890704364 1.205126462 1.047934063 1.193436862 1.409906344 1.427055913 0.949518396 1.003377005 1.383248279 1 15.18227287 -4.758928439 24.87316663 1.184063717 0.890703958 0.205617766 0.170389561 109.8163802 1087589.536 0.04416656 0.291262679 1.74E-05 4.758928439 -0.293359759 RKS(ph)ELEFETLK ddPTM_A459_MK2206_30min_R2 1 RKSELEFETLK 11 2 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 RKS(1)ELEFETLK 59.367 0.03926 3136600 25066 31032 32165 33871 31758 24302 35534 28212 21454 30474 TRUE FALSE 26985.07223 29490.996 33237.36505 31103.63095 30511.02135 25226.82964 30868.34312 31899.40527 23320.03014 29479.63588 0.915380107 1.000385355 1.127468643 1.055088709 1.034986371 0.855737491 1.04710734 1.082082744 0.791055569 1 14.84743108 RKS(ph)GGNEVSIEER ddPTM_A459_MK2206_30min_R1 1 RKSGGNEVSIEER 13 2 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 RKS(0.996)GGNEVS(0.004)IEER 64.565 0.030739 2649500 1969.3 1535.9 1693.8 1506.8 1732.9 1947.2 1658 1678.2 1128.8 1163.2 TRUE FALSE 1801.800694 1435.912631 1578.829575 1622.853997 1663.874924 2057.448781 1547.397845 1663.527674 1246.142799 1307.305998 1.378254744 1.09837531 1.207697033 1.241372716 1.272750929 1.57380811 1.183653902 1.272485307 0.953214321 1 10.35238115 -8.258187817 23.60027735 0.976607105 1.275428422 0.499248873 0.12092629 104.5184797 758641.9276 0.093001238 0.031743405 5.52E-09 8.258187817 0.298821317 RKS(ph)GGNEVSIEER ddPTM_A459_MK2206_30min_R2 1 RKSGGNEVSIEER 13 2 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 RKS(1)GGNEVSIEER 63.76 0.03174 9758300 28955 30878 26191 37219 36501 33812 35966 30916 31992 29423 TRUE FALSE 31171.81706 29344.64342 27064.19487 34178.08864 35067.78734 35098.73935 31243.621 34956.82735 34774.60633 28462.92992 1.095172463 1.030977609 0.950857657 1.200793057 1.232051213 1.233138663 1.097695181 1.22815281 1.221750762 1 14.79679656 -5.775084537 24.99447314 1.184657647 1.026200079 0.427144237 0.077615768 188.3362842 344984.0146 0.021076591 0.031452577 1.68E-06 5.775084537 -0.158457568 RKS(ph)HEAEVLK ddPTM_A459_MK2206_30min_R1 1 RKSHEAEVLK 10 2 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 RKS(1)HEAEVLK 76.326 0.022606 7292200 3283.2 2604.2 2379.9 3353.6 1215.2 1804.9 3387.5 4549.8 573.48 2200.4 TRUE FALSE 3003.946599 2434.666107 2218.359019 3611.894853 1166.796011 1907.091878 3161.526056 4510.021578 633.0952982 2473.002164 1.214696308 0.984498171 0.897030763 1.460530405 0.471813583 0.771164662 1.278416211 1.823703045 0.256002727 1 11.27204779 -9.781947906 15.6919705 1.000041692 1.034138955 0 0.436991718 0 0 0.412809954 0.10012112 1.65E-10 9.781947906 0.034097263 RKS(ph)HEAEVLK ddPTM_A459_MK2206_30min_R2 8 RKSHEAEVLK 10 2 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK 86.288 0.013804 99199400 430336 437462 447657 440113 520260 382777 521638 386634 414385 530485 TRUE FALSE 463282.855 415738.2732 462581.661 404154.36 499831.9783 397343.847 453146.304 437168.3913 450427.4583 513175.3179 0.902776963 0.810129129 0.90141058 0.787556116 0.973998477 0.774284797 0.883024355 0.851888967 0.877726271 1 18.96909226 -8.801722409 2.956838591 0.999998439 0.85957917 0.348602365 0.056773958 2.410803736 24.43914153 0.049400927 0.013143695 1.58E-09 8.801722409 -0.140419269 RKS(ph)LSDSESDDSK ddPTM_A459_MK2206_30min_R2 1 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 RKS(0.5)LS(0.5)DSESDDSK 100.02 0.0044098 14835000 135920 156960 146690 138200 140910 120950 126900 111070 119940 139180 TRUE FALSE 146326.1397 149165.5946 151580.5714 126908.6179 135377.1654 125552.837 110237.8776 125587.2304 130372.1644 134638.568 1.086807011 1.107896473 1.125833211 0.942587401 1.005485779 0.93251762 0.81876894 0.93277307 0.968312173 1 17.03873221 -5.766494049 24.80793632 0.937119989 1.106950672 0.69689544 0.049437723 62.48511149 306674.3845 0.014883293 0.022865044 1.71E-06 5.766494049 0.169830683 RKSLS(ph)DSESDDSK ddPTM_A459_MK2206_30min_R2 1 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 RKS(0.229)LS(0.77)DS(0.001)ESDDSK 89.629 0.0086903 13676000 150040 185490 154930 182400 178410 168110 149610 130200 146460 167130 TRUE FALSE 161527.1778 176278.8363 160095.2889 167497.3365 171404.727 174507.5439 129966.0273 147217.587 159198.8261 161676.5618 0.999076032 1.09031782 0.990219529 1.036002589 1.060170535 1.079362042 0.803864369 0.910568517 0.984674738 1 17.30275102 -7.236613234 24.96632721 0.917324257 1.042825283 0.501082464 0.057366724 587.6205345 590939.395 0.021577941 0.016706657 5.80E-08 7.236613234 0.125501025 RKSLVGT(ph)PYWMAPELISR ddPTM_A459_MK2206_30min_R1 1 RKSLVGTPYWMAPELISR 18 2 O96013;O96013-2;O96013-4;O96013-3;M0R1R1 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RKS(0.118)LVGT(0.678)PY(0.205)WMAPELISR 92.289 0.0065274 35579000 5456.3 4644 5424.2 5386.3 6109.3 4818 4577.8 5200.6 2916.5 2048.5 TRUE FALSE 4992.213033 4341.674756 5056.020417 5801.153759 5865.953644 5090.790996 4272.423315 5155.131702 3219.680612 2302.283645 2.16837445 1.885812274 2.196089273 2.519738943 2.54788486 2.211191921 1.855732817 2.239138393 1.398472607 1 11.16884987 -8.404668051 2.433292289 0.994961714 2.211993314 0.785869544 0.213791624 0.132455027 1.579443919 0.226380101 0.062454785 3.94E-09 8.404668051 1.2170316 up RKSLVGT(ph)PYWMAPELISR ddPTM_A459_MK2206_30min_R2 1 RKSLVGTPYWMAPELISR 18 2 O96013;O96013-2;O96013-4;O96013-3;M0R1R1 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RKS(0.111)LVGT(0.818)PY(0.072)WMAPELISR 73.953 0.021806 3729000 6401 17939 12554 17645 17739 16590 16865 11760 18285 10218 TRUE FALSE 6891.065482 17048.17535 12972.54409 16203.34706 17042.47773 17221.34408 14650.60524 13297.07238 19875.39625 9884.587497 0.69715256 1.724722994 1.31240116 1.639253743 1.72414658 1.742242059 1.48216658 1.345232908 2.010746149 1 13.27096505 -4.755136271 24.99994958 1.568380627 0.697151118 0.475578146 0.269342536 173.8954105 689654.452 0.062273118 0.568974237 1.76E-05 4.755136271 -0.871229509 RKSLVGTPY(ph)WMAPELISR ddPTM_A459_MK2206_30min_R2 1 RKSLVGTPYWMAPELISR 18 2 O96013;O96013-2;O96013-4;O96013-3;M0R1R1 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RKS(0.066)LVGT(0.032)PY(0.902)WMAPELISR 71.685 0.031189 6489100 10290 27409 20182 24584 35096 33045 28283 20798 34099 23332 TRUE FALSE 11077.81031 26047.90892 20854.85781 22575.40856 33717.9547 34302.55063 24569.40813 23516.37001 37064.86938 22570.67875 0.490805369 1.154059619 0.923980091 1.000209555 1.493883063 1.519783743 1.088554243 1.041899106 1.642169019 1 14.46216218 -4.534011318 0.796542739 1.276327576 1.10E-13 0.441540772 0.241133064 3.678673165 1.36892975 0.092415065 4.5596803 2.92E-05 4.534011318 -1.276327576 RKTS(ph)DANETEDHLESLICK ddPTM_A459_MK2206_30min_R1 1 RKTSDANETEDHLESLICK 19 2 F2Z2T1;Q09161 F2Z2T1 NCBP1 Nuclear cap-binding protein subunit 1 1 RKT(0.102)S(0.443)DANET(0.443)EDHLES(0.011)LICK 47.204 0.041738 21996000 6570.2 6761.2 6700.7 6185.6 5994.9 3674.8 3728 4493.2 2981.9 1711.7 TRUE FALSE 6011.369989 6321.044651 6245.875153 6662.015984 5756.110439 3882.864 3479.311922 4453.916426 3291.879176 1923.758319 3.124805195 3.285778983 3.246704689 3.463021274 2.992117244 2.018374118 1.808601366 2.315216201 1.71117086 1 10.90971185 -6.740478623 2.961233476 1.822922477 3.278273597 0.843334509 0.315439953 0.098704667 1.778988242 0.11072326 0.104207723 1.82E-07 6.740478623 1.455351121 RLAAAEETAVS(ph)PR ddPTM_A459_MK2206_30min_R1 5 RLAAAEETAVSPR 13 1 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 1 RLAAAEETAVS(1)PR;RLAAAEET(0.001)AVS(0.999)PR;RLAAAEETAVS(1)PR;RLAAAEET(0.004)AVS(0.996)PR;RLAAAEETAVS(1)PR 125.73 0.0037699 110043300 10463.8 9736.16 10614.7 8263.49 11754.3 11540.1 11460.1 9639.2 8273.1 7821.62 TRUE FALSE 9573.798862 9102.334214 9894.203738 8899.945432 11286.10134 12193.49049 10695.61764 9554.925491 9133.118351 8790.621336 1.089092397 1.035459709 1.125540887 1.012436447 1.28387982 1.387102234 1.216707811 1.086945408 1.038961639 1 13.10174943 -6.248571125 24.92291219 1.186577313 1.067756352 0.159506505 0.111808552 1349.327046 2613340.499 0.035674721 0.045758231 5.64E-07 6.248571125 -0.11882096 RLAAAEETAVS(ph)PR ddPTM_A459_MK2206_30min_R2 5 RLAAAEETAVSPR 13 1 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 1 RLAAAEETAVS(1)PR;RLAAAEETAVS(1)PR;RLAAAEETAVS(1)PR;RLAAAEETAVS(1)PR;RLAAAEET(0.004)AVS(0.996)PR 151.73 0.00023496 218732800 258082 369573 302172 382577 362572 372518 342099 268391 348752 323705 TRUE FALSE 277840.9564 351220.5422 312246.2637 351319.2353 348335.6015 386694.4335 297180.9904 303470.6252 379085.8186 313142.5324 0.887266748 1.12159961 0.997137825 1.12191478 1.112386742 1.23488314 0.94902787 0.969113403 1.21058553 1 18.25645995 -4.753629621 24.98090471 1.079200329 0.887266399 0.273867538 0.093964743 394.353372 1261307.072 0.023313542 0.246218445 1.76E-05 4.753629621 -0.19193393 RLAS(ph)TSDIEEK ddPTM_A459_MK2206_30min_R1 4 RLASTSDIEEK 11 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RLAS(0.959)T(0.036)S(0.005)DIEEK;RLAS(0.988)T(0.008)S(0.004)DIEEK;RLAS(0.477)T(0.477)S(0.045)DIEEK;RLAS(0.476)T(0.476)S(0.048)DIEEK 167.73 0.0005313 154931000 23598.9 27808.8 25634.3 19289.4 15387.9 11792.8 11830.3 11706.1 10359.6 9637.8 TRUE FALSE 21591.68963 25998.44207 23894.31514 20775.07293 14774.96736 12460.49814 11041.12227 11603.7548 11436.51749 10831.80343 1.99336055 2.400195152 2.205940617 1.9179699 1.364035773 1.150362286 1.019324469 1.071267115 1.055827644 1 13.40298584 -6.275893016 1.644528307 1.048809936 2.233398234 0.96514195 0.097488903 0.059471652 0.318927793 0.034628624 0.046066165 5.30E-07 6.275893016 1.184588298 RLAS(ph)TSDIEEK ddPTM_A459_MK2206_30min_R2 3 RLASTSDIEEK 11 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RLAS(0.447)T(0.447)S(0.106)DIEEK;RLAS(0.441)T(0.441)S(0.119)DIEEK;RLAS(0.961)T(0.036)S(0.003)DIEEK 134.04 0.0030614 85789000 243821 244677 216390 200510 172960 118139 139548 122245 88938 131604 TRUE FALSE 262488.1232 232526.696 223604.3346 184127.6916 166168.7213 122634.8624 121225.18 138222.8412 96673.66648 127309.7723 2.061806557 1.826463844 1.756379975 1.446296607 1.305231471 0.963279254 0.9522064 1.085720591 0.759357783 1 16.95798364 -5.967584116 0.791336402 0.915667082 2.070443 0.950368368 0.093124839 0.151871607 0.186795065 0.045148111 0.115479181 1.08E-06 5.967584116 1.154775919 up RLAS(ph)TSDIEEKENR ddPTM_A459_MK2206_30min_R1 1 RLASTSDIEEKENR 14 2 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RLAS(0.781)T(0.162)S(0.057)DIEEKENR 79.326 0.040996 9363800 2321.1 2395.5 2553.3 2020.7 2139.4 1050.5 934.02 1533.8 609.55 318.07 TRUE FALSE 2123.678256 2239.552515 2379.98911 2176.334664 2054.183168 1109.978402 871.71323 1520.390148 672.9149038 357.4749129 5.940775645 6.264922191 6.657779396 6.088076633 5.746370147 3.105052584 2.438529806 4.253138034 1.882411547 1 8.481698189 -6.753569184 3.178996832 2.659980118 6.247222841 0.839984526 0.790147825 0.096440889 2.020903366 0.277479132 0.259538026 1.76E-07 6.753569184 3.587242723 RLDAAYR ddPTM_A459_MK2206_30min_R2 1 RLDAAYR 7 1 Q9Y5A9;A0A024R7W5;A0A087X0Q1;A0A087WY31;Q9Y5A9-2;Q7Z739 Q9Y5A9 YTHDF2;YTHDF3 YTH domain-containing family protein 2;YTH domain-containing family protein 3 0 141.52 0.0042777 2083900 3193.8 4721.1 4270.7 4964.6 5157.2 4429 4438.2 3851.6 5304.1 4411.9 FALSE TRUE 3438.319784 4486.657039 4413.083006 4558.976299 4954.702415 4597.548699 3855.459009 4355.017345 5765.44103 4267.940064 0.805615761 1.051246496 1.034007727 1.068191266 1.160911901 1.077228974 0.903353597 1.020402648 1.35087207 1 12.0593242 -4.230253386 1.605622331 1.075986607 1.48E-12 0.343922022 0.111260581 6.476835127 4.627139732 0.031055302 16.94796141 5.89E-05 4.230253386 -1.075986607 RLDEEEEDNEGGEWER ddPTM_A459_MK2206_30min_R1 2 RLDEEEEDNEGGEWER 16 1 Q99613-2;Q99613 Q99613-2 EIF3C Eukaryotic translation initiation factor 3 subunit C 0 ; 332.06 3.09E-250 33605000 2184.2 2049.46 2084.2 1879.29 2290.3 1617.38 2315.76 2293.68 1656.1 1514.85 FALSE TRUE 1998.42232 1916.039781 1942.730311 2024.033241 2199.072501 1708.954658 2161.279876 2273.626598 1828.257521 1702.521055 1.173801825 1.125413267 1.141090329 1.188844764 1.291656567 1.003778869 1.26945853 1.335446978 1.073853105 1 10.73345692 -5.759054581 22.92403165 1.182894061 1.144632935 0 0.11012978 111.6302388 1072957.715 0.029702837 0.048388593 1.74E-06 5.759054581 -0.038261126 RLDEELEDAEK ddPTM_A459_MK2206_30min_R2 2 RLDEELEDAEK 11 1 Q15008-4;C9J0E9;Q15008;C9J7B7;Q15008-3;Q15008-2 Q15008-4 PSMD6 26S proteasome non-ATPase regulatory subunit 6 0 ; 193.15 2.74E-05 12388700 78748 75519 77300 79581 76928 65144 85154 62386 64141 84569 FALSE TRUE 84777.00743 71768.83627 79877.14342 73078.97773 73907.42019 67623.10057 73973.17751 70540.0644 69719.86824 81809.52046 1.036273125 0.877267534 0.976379558 0.893282069 0.903408549 0.826592066 0.904212335 0.862247621 0.85222194 1 16.31998112 -1.522878749 0.821518679 0.887112999 38.97168508 0.338916607 0.052913834 611.4140969 1.934584313 0.017607983 43420.18742 0.03 1.522878749 38.08457208 RLDEVSR ddPTM_A459_MK2206_30min_R2 2 RLDEVSR 7 1 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 0 ; 102.51 0.026018 2848460 5653.2 4636.4 7448.3 10460.8 7866.3 5307.9 7981.3 7145.7 7789.1 6346.7 FALSE TRUE 6086.013339 4406.163118 7696.622605 9606.119178 7557.429537 5509.895854 6933.345723 8079.667525 8466.581839 6139.607699 0.991270719 0.717661996 1.253601693 1.564614491 1.230930364 0.897434514 1.129281554 1.315990845 1.379010232 1 12.58393076 -5.272406099 24.70234517 1.23038726 0.85446636 0.378049347 0.18795023 575.2532455 1295749.495 0.052399238 0.110809688 5.34E-06 5.272406099 -0.3759209 RLDLPIER ddPTM_A459_MK2206_30min_R1 1 RLDLPIER 8 1 B4E1E0;P17812-2;P17812;A0A3B3IRI2;A0A3B3ISY3;A0A3B3ITB8;A0A3B3IRQ8;A0A3B3ITF6 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 0 112.3 0.015199 5174700 2135.1 2322.8 2264.8 2213.4 2589.7 2251.8 2480.8 2140.4 2026.9 1908.4 FALSE TRUE 1953.498533 2171.585298 2111.071686 2383.876452 2486.546765 2379.29497 2315.310358 2121.686708 2237.603508 2144.827 0.910795385 1.012475737 0.984261988 1.111453955 1.159322764 1.109317894 1.079485832 0.989211115 1.04325594 1 11.06664557 -5.053288858 1.398866572 1.072211594 0.901710673 0.423566992 0.053930013 0.803920203 2.026445002 0.017632502 0.168275626 8.85E-06 5.053288858 -0.170500922 RLDLPIER ddPTM_A459_MK2206_30min_R2 2 RLDLPIER 8 1 B4E1E0;P17812-2;P17812;A0A3B3IRI2;A0A3B3ISY3;A0A3B3ITB8;A0A3B3IRQ8;A0A3B3ITF6 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 0 ; 128.28 0.0059108 7663900 19948.5 21759 22861 24356 26246 23541 23847 18811.7 24584 23402 FALSE TRUE 21475.7725 20678.4797 23623.17433 22366.03689 25215.45016 24436.86925 20715.86025 21270.45378 26722.27188 22638.39466 0.94864379 0.913425179 1.04350042 0.98796921 1.113835612 1.079443557 0.915076381 0.939574299 1.180396061 1 14.46648404 -5.262586051 24.9239187 1.029117347 0.931034479 0.223198515 0.075489403 145.1541235 3155141.883 0.019975069 0.045747715 5.46E-06 5.262586051 -0.098082868 RLDQLER ddPTM_A459_MK2206_30min_R1 2 RLDQLER 7 1 Q96CT7;M0R2F5 Q96CT7 CCDC124 Coiled-coil domain-containing protein 124 0 ; 97.431 0.032109 0 2525.7 2336.3 2282.55 1919.42 2554.4 2607.3 2607.6 2372.8 1986.65 2226.74 FALSE TRUE 2310.875952 2184.206445 2127.616866 2067.254061 2452.652839 2754.923073 2433.651762 2352.05486 2193.169377 2502.605362 0.923388077 0.872773022 0.850160756 0.82604077 0.980039792 1.100822013 0.972447274 0.939842492 0.876354462 1 11.28921509 -6.275641414 23.74855705 0.98108151 0.867144407 0.471308962 0.057107557 387.7501764 648391.8289 0.019274065 0.021975626 5.30E-07 6.275641414 -0.113937103 RLDSDAVNTIES(ph)QSVSPDHNKEPK ddPTM_A459_MK2206_30min_R2 1 RLDSDAVNTIESQSVSPDHNKEPK 24 2 Q3T7B4;Q9H3H1-6;Q9H3H1-3;Q9H3H1-2;Q9H3H1-5;Q9H3H1-4;Q9H3H1 Q3T7B4 TRIT1 "tRNA dimethylallyltransferase, mitochondrial" 1 RLDSDAVNTIES(0.333)QS(0.333)VS(0.333)PDHNKEPK 59.469 0.0037456 6038900 21968 22147 27248 26225 26719 21916 31742 22928 21681 33189 TRUE FALSE 23649.88697 21047.21218 28156.43472 24082.33361 25669.87781 22750.02874 27574.23727 25924.76832 23566.77419 32106.04565 0.73661787 0.655552927 0.87698233 0.750087192 0.799534084 0.708590182 0.858848753 0.807473104 0.734029175 1 14.97055737 -14.52287875 0.221820836 2.156636278 0.744307761 0.538695316 0.064076653 120.7281912 1.205106291 62.53789543 0.118869125 3.00E-15 14.52287875 -1.412328517 RLDSDAVNTIESQSVS(ph)PDHNKEPK ddPTM_A459_MK2206_30min_R2 1 RLDSDAVNTIESQSVSPDHNKEPK 24 2 Q3T7B4;Q9H3H1-6;Q9H3H1-3;Q9H3H1-2;Q9H3H1-5;Q9H3H1-4;Q9H3H1 Q3T7B4 TRIT1 "tRNA dimethylallyltransferase, mitochondrial" 1 RLDSDAVNTIES(0.037)QS(0.109)VS(0.854)PDHNKEPK 69.255 0.00070113 6043700 26126 24704 26577 28241 31198 26492 34023 19182 19664 27288 TRUE FALSE 28126.22665 23477.23528 27463.06392 25933.61996 29973.00976 27500.17162 29555.73923 21689.15326 21374.33918 26397.59479 1.065484445 0.889370242 1.040362356 0.982423594 1.135444725 1.041768079 1.119637583 0.821633692 0.809707829 1 14.68811886 -7.77054253 24.99958128 0.861753031 1.035109313 0.452924041 0.081026539 171.4116244 470731.969 0.043481312 0.02135641 1.70E-08 7.77054253 0.173356282 RLEAAYLDLQR ddPTM_A459_MK2206_30min_R1 2 RLEAAYLDLQR 11 1 E5RIW3;E5RJD8;E5RHG6;O75347;O75347-2 E5RIW3 TBCA Tubulin-specific chaperone A 0 ; 133.32 0.0024933 26167000 4600.2 4781.9 4975.6 4636 5164.6 4890.1 4750.8 4775.1 3782.9 3411.2 FALSE TRUE 4208.928833 4470.597441 4637.870135 4993.065523 4958.883046 5166.973236 4433.8828 4733.351804 4176.145992 3833.805209 1.097846292 1.166099266 1.20973025 1.302378512 1.293462441 1.347740157 1.156522713 1.234635446 1.089295299 1 11.90456132 -8.439008993 2.114968697 0.999101007 1.232265711 0.522733101 0.071468969 0.255308229 2.444523426 0.074024944 0.020712516 3.64E-09 8.439008993 0.233164704 RLEEQAAQHK ddPTM_A459_MK2206_30min_R1 1 RLEEQAAQHK 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 85.355 0.024685 1225300 2075 1792 1689 1822.8 1254.3 1120.7 2286.6 2578.4 335.47 1175.8 FALSE TRUE 1898.510354 1675.340474 1574.355386 1963.192372 1204.338575 1184.153066 2134.065086 2555.857321 370.343307 1321.466981 1.436668779 1.267788374 1.191369447 1.48561591 0.911364864 0.896089787 1.614921233 1.934106079 0.280251654 1 10.36792466 -8.27514547 24.9997384 0.64012587 1.319364118 0.409710638 0.336206519 944.5818733 1722887.912 0.325395184 0.085814723 5.31E-09 8.27514547 0.679238248 RLEEQAAQHK ddPTM_A459_MK2206_30min_R2 4 RLEEQAAQHK 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ;;; 100.48 0.011731 8724300 45409.2 56719.1 54324 57552 62187 50351.5 52742.3 52897.1 54653.7 50817.3 FALSE TRUE 48885.76327 53902.51197 56135.13505 52849.8175 59745.22592 52267.66162 45817.17266 59810.93259 59407.38003 49159.13566 0.994439032 1.09649023 1.141906469 1.075076215 1.215343295 1.063233942 0.932017458 1.216679907 1.208470801 1 15.58517193 -4.769536575 4.41448778 1.109884232 0.985178496 0.121231013 0.089655158 0.449357285 18.81140808 0.022847753 0.177408373 1.70E-05 4.769536575 -0.124705735 RLEQTSVRDPS(ph)PEADAPVLGSPEK ddPTM_A459_MK2206_30min_R2 2 RLEQTSVRDPSPEADAPVLGSPEK 24 2 O15234 O15234 CASC3 Protein CASC3 1 RLEQT(0.001)S(0.001)VRDPS(0.998)PEADAPVLGSPEK;RLEQT(0.002)S(0.002)VRDPS(0.995)PEADAPVLGS(0.001)PEK 68.42 0.00079006 13021300 59138 54616 50264 59139 52024 52164 59419 43830 44485 60725 TRUE FALSE 63665.65075 51903.84886 51939.77667 54307.15452 49981.27636 54149.13757 51617.21392 49558.73149 48354.22489 58743.54822 1.08378967 0.883566799 0.884178403 0.924478622 0.850838566 0.921788677 0.878687371 0.843645523 0.823141032 1 15.84214279 -4.761108502 24.99999815 0.885455992 1.083789883 0.595265053 0.0477952 5.153211419 388789.1262 0.011281484 0.064081585 1.73E-05 4.761108502 0.198333891 RLETLLR ddPTM_A459_MK2206_30min_R2 1 RLETLLR 7 1 O95816-2;O95816 O95816-2 BAG2 BAG family molecular chaperone regulator 2 0 98.458 0.029435 0 2892.8 5893.1 4231.6 4931.5 4036.6 5504.9 4393.2 4577.8 5696.9 3453.5 FALSE TRUE 3114.274992 5600.457223 4372.679432 4528.580675 3878.102802 5714.392827 3816.367563 5176.134178 6192.406064 3340.812578 0.932190873 1.67637576 1.308867029 1.355532694 1.16082621 1.710479919 1.142347101 1.549363832 1.853562844 1 11.70598333 -6.737347875 24.99767802 1.466186047 1.313453049 0.06955333 0.290003545 727.9190374 755297.2492 0.092028033 0.091983502 1.83E-07 6.737347875 -0.152732998 RLFDANK ddPTM_A459_MK2206_30min_R1 1 RLFDANK 7 1 P06744-2;P06744;A0A2U3TZU2;A0A0J9YXP8;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;K7EPY4;K7ERC6;K7EP41;A0A2R8YF08;K7ELR7;K7ENA0;K7ERK8;K7EIL4;A0A0J9YXM3;A0A0J9YXH9;A0A0J9YYI8 P06744-2 GPI Glucose-6-phosphate isomerase 0 90.37 0.040237 6153700 5587.4 6223.6 5966.7 5374.2 5698.9 5419.4 6101.6 5126.2 4013 5311.4 FALSE TRUE 5112.162289 5818.442509 5561.697028 5788.121815 5471.900745 5726.241745 5694.573397 5081.382174 4430.165711 5969.416331 0.856392318 0.97470878 0.931698632 0.96962944 0.916655908 0.959263256 0.953958156 0.851236016 0.742143865 1 12.54337416 -7.76867475 23.29920705 0.847517345 0.939956753 0.187404403 0.066797795 90.66157264 291933.3557 0.033051327 0.016443959 1.70E-08 7.76867475 0.092439407 RLFDANK ddPTM_A459_MK2206_30min_R2 1 RLFDANK 7 1 P06744-2;P06744;A0A2U3TZU2;A0A0J9YXP8;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;K7EPY4;K7ERC6;K7EP41;A0A2R8YF08;K7ELR7;K7ENA0;K7ERK8;K7EIL4;A0A0J9YXM3;A0A0J9YXH9;A0A0J9YYI8 P06744-2 GPI Glucose-6-phosphate isomerase 0 130.22 0.003503 0 17758 22872 22655 27555 22566 25310 21851 18516 22204 20020 FALSE TRUE 19117.56613 21736.20974 23410.30639 25303.66836 21679.94545 26273.18979 18981.93745 20936.10477 24135.26378 19366.74904 0.987133467 1.122346848 1.208788648 1.306552189 1.119441648 1.356613324 0.980130295 1.081033514 1.246221745 1 14.24129418 -7.290227779 24.99986138 1.083599213 1.184534511 0.165845492 0.116750419 1500.353914 1302901.535 0.049528028 0.033397544 5.13E-08 7.290227779 0.100935297 RLFDDEAS(ph)VDEPR ddPTM_A459_MK2206_30min_R1 3 RLFDDEASVDEPR 13 1 A0A0U1RR46;A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35;Q8NI35-5 A0A0U1RR46 INADL InaD-like protein 1 RLFDDEAS(1)VDEPR;RLFDDEAS(1)VDEPR;RLFDDEAS(1)VDEPR 160.09 0.00018691 21507400 6585.6 6271.3 6478.6 5451.7 7668.7 7125.3 7326.4 6355.2 4819.5 4359.67 TRUE FALSE 6025.460138 5863.03723 6038.850682 5871.590879 7363.23944 7528.728328 6837.669224 6299.637156 5320.504272 4899.778833 1.229741248 1.19659222 1.232474136 1.198337941 1.502769756 1.536544523 1.395505686 1.285698267 1.08586621 1 12.25850091 -8.315551659 2.830316619 1.006388521 1.32942142 0.495083338 0.114896072 0.253354002 3.774916287 0.125161377 0.034862794 4.84E-09 8.315551659 0.323032898 RLFDDEAS(ph)VDEPR ddPTM_A459_MK2206_30min_R2 1 RLFDDEASVDEPR 13 1 A0A0U1RR46;A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35;Q8NI35-5 A0A0U1RR46 INADL InaD-like protein 1 RLFDDEAS(1)VDEPR 142.4 0.00039911 8145800 11518 15628 11266 14962 18280 18844 13840 13051 13931 11450 TRUE FALSE 12399.82694 14851.93625 11641.60282 13739.55674 17562.23535 19561.12162 12022.79138 14756.81051 15142.6932 11076.38744 1.119482955 1.340864639 1.051028856 1.240436633 1.585556252 1.766019989 1.085443376 1.332276484 1.3671148 1 13.4351998 -4.758395111 23.62196516 1.323968287 1.11948238 0.054676626 0.225693858 136.3253556 1057420.726 0.05828932 0.395160551 1.74E-05 4.758395111 -0.204485907 RLGDS(ph)SLSR ddPTM_A459_MK2206_30min_R1 2 RLGDSSLSR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RLGDS(0.492)S(0.492)LS(0.017)R;RLGDS(0.476)S(0.476)LS(0.049)R 90.653 0.014507 43166000 5229 4817 4682.4 4376.6 5617.4 5030 5333.2 5689.4 3276.7 3031.4 TRUE FALSE 4784.246091 4503.412424 4364.571734 4713.68649 5393.647063 5314.794253 4977.431959 5639.658176 3617.324691 3406.952718 1.404259609 1.321830033 1.281077871 1.383549136 1.583129415 1.559984741 1.460963028 1.655337964 1.06174784 1 11.73426621 -8.365741083 6.357061502 1.009515175 1.450776061 0.699564471 0.111620226 0.151215479 7.622432488 0.119278978 0.030945412 4.31E-09 8.365741083 0.441260886 RLGDSSLSR ddPTM_A459_MK2206_30min_R1 1 RLGDSSLSR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 92.538 0.042225 0 623.47 544.96 537.87 673.36 454.93 302.03 607.59 592.54 419.98 414.46 FALSE TRUE 570.4406025 509.4830049 501.360883 725.2223039 436.8091748 319.1306776 567.0587797 587.3594853 463.6384239 465.8064338 1.224630149 1.093765496 1.076328807 1.556917748 0.937748264 0.685114362 1.217370003 1.260951852 0.995345685 1 8.863586756 RLGDSSLSR ddPTM_A459_MK2206_30min_R2 2 RLGDSSLSR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 119.22 0.0094236 3949900 12231.5 21529.5 18662.1 24205 26034 27603 22972 16887.1 21994 20908 FALSE TRUE 13167.95304 20460.37634 19284.2851 22227.37407 25011.77435 28653.45151 19955.74881 19094.30195 23906.99836 20225.77367 0.651048175 1.011599194 0.953451048 1.09896286 1.236628806 1.416680122 0.986649467 0.944057926 1.182006619 1 14.30390727 -4.358927957 1.062966704 1.124917688 5.29E-13 0.496928733 0.137673918 3.535078395 1.779999232 0.046698428 5.573128699 4.38E-05 4.358927957 -1.124917688 RLGS(ph)VEAPK ddPTM_A459_MK2206_30min_R2 2 RLGSVEAPK 9 1 P46087-2;P46087;P46087-4;P46087-3;F5H359;F5GWB7;F5H709;F5H5X6 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 RLGS(1)VEAPK;RLGS(1)VEAPK 81.494 0.022451 15385800 84435 105123 72683 81185 72940 53493 73668 56933 58662 73693 TRUE FALSE 90899.40852 99902.74468 75106.21494 74551.9258 70076.00911 55528.7136 63995.30311 64374.33858 63764.31472 71288.40345 1.275093902 1.401388443 1.053554454 1.045779148 0.982993106 0.778930526 0.897695839 0.903012769 0.894455643 1 16.12137979 -5.56352761 1.236694999 0.896533178 1.36837458 0.817699927 0.075959416 0.210250671 0.585171404 0.025093135 0.088836528 2.73E-06 5.56352761 0.471841402 RLLDDISNGYDDS(ph)EDGGHTLGDPSYSYETTEK ddPTM_A459_MK2206_30min_R2 1 RLLDDISNGYDDSEDGGHTLGDPSYSYETTEK 32 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 RLLDDIS(0.26)NGY(0.225)DDS(0.284)EDGGHT(0.204)LGDPS(0.009)Y(0.009)S(0.004)Y(0.003)ET(0.001)T(0.001)EK 40.907 0.03812 5421700 10276 12938 11663 13089 13832 11299 15203 8182.6 10406 11819 TRUE FALSE 11062.73846 12295.51773 12051.8386 12019.58683 13288.88618 11728.99136 13206.82784 9252.093915 11311.09507 11433.347 0.967585298 1.075408429 1.054095411 1.05127456 1.162291863 1.025858077 1.155114757 0.809220075 0.989307424 1 13.48096018 -7.753965994 24.9999999 0.924447804 1.070915899 0.431096746 0.072130249 138.6029949 463659.5343 0.032758212 0.018439654 1.76E-08 7.753965994 0.146468095 RLLEDGEDFNLGDALDSS(ph)NSMQTIQK ddPTM_A459_MK2206_30min_R1 1 RLLEDGEDFNLGDALDSSNSMQTIQK 26 1 P05783 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 RLLEDGEDFNLGDALDS(0.046)S(0.623)NS(0.329)MQT(0.002)IQK 129.71 3.19E-09 13867000 2309.6 2702.8 2406.2 2671.8 3340.9 2679.8 2281.8 2625.6 1543.7 1102.2 TRUE FALSE 2113.156392 2526.847229 2242.873848 2877.582499 3207.824879 2831.52796 2129.585285 2602.644656 1704.173139 1238.748857 1.705879589 2.039838192 1.810596099 2.322974897 2.589568386 2.285796628 1.719142079 2.101026888 1.37572126 1 10.27466801 -8.417386622 1.766088783 0.9874474 2.101317141 0.641959563 0.269345718 0.228831979 1.510976217 0.276048999 0.079744645 3.82E-09 8.417386622 1.113869741 RLLEDGEDFNLGDALDSSNS(ph)MQTIQK ddPTM_A459_MK2206_30min_R1 1 RLLEDGEDFNLGDALDSSNSMQTIQK 26 1 P05783 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 RLLEDGEDFNLGDALDS(0.313)S(0.208)NS(0.472)MQT(0.007)IQK 137.7 1.76E-09 16143000 1736 1769.5 1603.1 2044.9 2265.3 1697.2 1604.8 1826.9 1067.7 763.09 TRUE FALSE 1588.344084 1654.305228 1494.286038 2202.398552 2175.068304 1793.293997 1497.74672 1810.927606 1178.691236 857.6273502 1.852021258 1.928932453 1.742348863 2.568013429 2.536146152 2.090994412 1.746384044 2.111555334 1.374362928 1 9.744207105 -8.417020965 2.181315626 0.992039245 2.08868356 0.63202553 0.275977163 0.204656435 2.026593127 0.289143368 0.08077969 3.83E-09 8.417020965 1.096644315 RLLEDGEDFNLGDALDSSNSMQTIQK ddPTM_A459_MK2206_30min_R1 2 RLLEDGEDFNLGDALDSSNSMQTIQK 26 1 P05783 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 ; 183.99 2.04E-21 79942000 3746.9 3922.7 3640.5 4160.8 5044 3559.1 3188.5 3929.2 2151.6 1171.24 FALSE TRUE 3428.206479 3667.331517 3393.393003 4481.265537 4843.086799 3760.613166 2975.800983 3894.847419 2375.26652 1316.342054 2.604343202 2.786001941 2.577896067 3.404332122 3.679200847 2.856866235 2.260659359 2.958841441 1.804444759 1 10.36231871 -8.519107669 1.089514992 0.983346871 2.9621461 0.71049931 0.393517843 0.317238565 0.826704879 0.404040376 0.130485414 3.03E-09 8.519107669 1.978799229 RLLGPAPEDDGGHNDHSQPQASQDQDS(ph)HTLSPQV ddPTM_A459_MK2206_30min_R2 1 RLLGPAPEDDGGHNDHSQPQASQDQDSHTLSPQV 34 1 Q92610 Q92610 ZNF592 Zinc finger protein 592 1 RLLGPAPEDDGGHNDHS(0.043)QPQAS(0.043)QDQDS(0.405)HT(0.405)LS(0.103)PQV 46.415 0.0082114 16047000 10080 20281 13690 18664 16879 19309 16129 14754 17546 14456 TRUE FALSE 10851.73255 19273.87503 14146.41777 17139.0915 16216.24565 20043.81753 14011.24293 16682.39846 19072.11936 13984.3019 0.77599387 1.378250782 1.011592703 1.225595072 1.159603516 1.43330841 1.001926519 1.192937522 1.363823485 1 13.77152062 -4.745528481 24.98444829 1.197689919 0.775992685 0.408737793 0.151659939 891.0945339 1399184.801 0.035389774 0.897512211 1.80E-05 4.745528481 -0.421697234 RLLGPAPEDDGGHNDHSQPQASQDQDSHTLS(ph)PQV ddPTM_A459_MK2206_30min_R2 2 RLLGPAPEDDGGHNDHSQPQASQDQDSHTLSPQV 34 1 Q92610 Q92610 ZNF592 Zinc finger protein 592 1 RLLGPAPEDDGGHNDHS(0.001)QPQAS(0.106)QDQDS(0.154)HT(0.154)LS(0.584)PQV;RLLGPAPEDDGGHNDHS(0.003)QPQAS(0.07)QDQDS(0.159)HT(0.159)LS(0.609)PQV 45.424 0.013316 48355000 15793.7 31352 25497 33203 31948 34437 25346 25086 34955 22281 TRUE FALSE 17002.87782 29795.10527 26347.05725 30490.20869 30693.56099 35747.52417 22018.03975 28364.82633 37995.32272 21553.97279 0.788851224 1.382348653 1.222375917 1.414598087 1.42403265 1.658512076 1.02153046 1.315990634 1.762799048 1 14.39566619 -4.760356275 24.88998443 1.364487609 0.788850503 0.354944844 0.22901891 27.87914374 640356.8728 0.054955886 0.327410104 1.74E-05 4.760356275 -0.575637106 RLNHS(ph)PPQSSSR ddPTM_A459_MK2206_30min_R1 2 RLNHSPPQSSSR 12 1 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6 A0A087X0H9 RBM26 RNA-binding protein 26 1 RLNHS(0.782)PPQS(0.048)S(0.104)S(0.065)R;RLNHS(0.992)PPQS(0.005)S(0.003)SR 105.19 0.0048393 38859000 7358.8 7338.4 6881.1 6212.3 8907.9 7405.4 8020.5 7170.9 4698.7 3940.2 TRUE FALSE 6732.895417 6860.668826 6414.030104 6690.772422 8553.07948 7824.687348 7485.467079 7108.205577 5187.146679 4428.341723 1.520410085 1.549263642 1.448404506 1.510897948 1.93144071 1.766956535 1.690354437 1.605161937 1.171351943 1 12.11255084 -8.348116969 2.988301391 1.007945887 1.63565749 0.728797019 0.134250174 0.143961848 2.370954057 0.143919259 0.039359543 4.49E-09 8.348116969 0.627711603 RLNHS(ph)PPQSSSR ddPTM_A459_MK2206_30min_R2 3 RLNHSPPQSSSR 12 1 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6 A0A087X0H9 RBM26 RNA-binding protein 26 1 RLNHS(0.788)PPQS(0.095)S(0.058)S(0.058)R;RLNHS(0.881)PPQS(0.078)S(0.026)S(0.015)R;RLNHS(0.997)PPQS(0.001)S(0.001)SR 95.822 0.0090788 148745000 59331.5 96340 67657 99661.1 101310.3 107854.4 94077.4 64149.6 88931.6 70974.4 TRUE FALSE 63873.96526 91555.89569 69912.65061 91518.46933 97332.34858 111958.8748 81724.92437 72534.17298 96666.70982 68658.51114 0.930313871 1.333496666 1.018266337 1.332951557 1.417629759 1.630662724 1.190310174 1.056448382 1.407934839 1 16.06715095 -4.755508369 24.94733901 1.275292827 0.930313295 0.213918966 0.191785666 308.2765212 1296557.065 0.048930332 0.430342775 1.76E-05 4.755508369 -0.344979532 RLNHSPPQSS(ph)SR ddPTM_A459_MK2206_30min_R2 1 RLNHSPPQSSSR 12 1 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6 A0A087X0H9 RBM26 RNA-binding protein 26 1 RLNHS(0.028)PPQS(0.298)S(0.565)S(0.109)R 72.662 0.029037 6672700 6278.8 10765 5494.1 10131 9690.5 13673 10532 5888.8 9221.3 7095.9 TRUE FALSE 6759.509756 10230.42575 5677.270552 9303.264893 9310.002279 14193.3356 9149.135749 6658.486379 10023.35201 6864.361364 0.98472522 1.49036818 0.827064639 1.355299408 1.35628091 2.067684792 1.332845878 0.970008137 1.460201681 1 12.74490979 -4.743031978 24.31092505 1.327763876 0.98472367 0.083960159 0.328508487 2401.875263 3171953.632 0.08436542 2.676704334 1.81E-05 4.743031978 -0.343040207 RLPATLLNAFPTAPS(ph)PRPPR ddPTM_A459_MK2206_30min_R1 2 RLPATLLNAFPTAPSPRPPR 20 2 Q93015;Q93015-2 Q93015 NAT6 N-acetyltransferase 6 1 RLPATLLNAFPT(0.001)APS(0.999)PRPPR;RLPATLLNAFPTAPS(1)PRPPR 130.4 6.57E-05 15241300 6650.6 6558 5821.4 5935.5 6978.5 5498.6 6480.4 6123.9 5510.4 4708 TRUE FALSE 6084.931546 6131.073008 5426.259587 6392.653238 6700.531568 5809.92598 6048.10434 6070.359388 6083.225799 5291.262584 1.14999614 1.158716452 1.025513193 1.208152712 1.266338886 1.098022615 1.143036136 1.147242136 1.149673769 1 12.3693963 -10.70527469 0.774935847 0.96507698 1.150219698 0.363813062 0.059365654 96.61794634 24.86509719 7.651998208 0.021030283 1.97E-11 10.70527469 0.185142718 RLPDAHSDYAR ddPTM_A459_MK2206_30min_R1 4 RLPDAHSDYAR 11 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 0 ;;; 152.04 0.00039493 36610700 7223.3 6330.5 6907.6 6390.1 8215.8 7364.8 8213.5 7208.2 5759.2 5310.41 FALSE TRUE 6608.920404 5918.383299 6438.731358 6882.266609 7888.547289 7781.788611 7665.592401 7145.179467 6357.889449 5968.303682 1.107336482 0.99163575 1.078821002 1.15313613 1.321740265 1.303852657 1.284383773 1.197187651 1.065275795 1 12.54310523 -5.83956124 3.250212585 1.216331064 1.049079097 0.251170199 0.100583169 0.281041507 5.932530985 0.029631178 0.048247643 1.45E-06 5.83956124 -0.167251967 RLPDAHSDYAR ddPTM_A459_MK2206_30min_R2 2 RLPDAHSDYAR 11 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 0 ; 100.69 0.010809 11929600 11499 21322.8 9443.2 22968.2 22373.3 22965.5 21550.5 11255.4 17640.6 17196.8 FALSE TRUE 12379.37228 20263.94076 9758.031575 21091.62459 21494.81183 23839.4682 18720.89346 12726.51943 19174.9475 16635.66982 0.744146308 1.218101884 0.586572809 1.267855446 1.292091755 1.433033262 1.125346539 0.765013947 1.152640543 1 14.02199234 -4.748215013 24.50385847 1.093496314 0.744145216 0.159439362 0.240578334 1043.733047 1933819.342 0.062669077 1.142834003 1.79E-05 4.748215013 -0.349351098 RLPENLYNDR ddPTM_A459_MK2206_30min_R2 2 RLPENLYNDR 10 1 E5RHG9;B7Z2R2;P14927;P14927-2 E5RHG9 UQCRB Cytochrome b-c1 complex subunit 7 0 ; 152.64 0.0017768 0 13574.2 13513 13335.9 12984.8 10204.9 14302.8 19121.9 12005.7 16377.8 13675 FALSE TRUE 14613.45119 12841.96407 13780.51225 11923.9003 9804.20435 14847.10308 16611.17156 13574.88621 17802.31144 13228.78587 1.104670628 0.970759085 1.041706502 0.901360142 0.741126544 1.122333011 1.255683758 1.026162669 1.34572527 1 13.69139304 -6.975327868 24.97820686 1.163349667 0.952807625 0.373184922 0.128853868 234.3964638 237303.5887 0.044707801 0.039427201 1.06E-07 6.975327868 -0.210542042 RLPS(ph)TEQDSGR ddPTM_A459_MK2206_30min_R2 2 RLPSTEQDSGR 11 1 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 RLPS(0.83)T(0.154)EQDS(0.016)GR;RLPS(0.883)T(0.11)EQDS(0.007)GR 68.262 0.037201 7151000 26269 28671 26349 27098 22933.8 27955 23640.7 19075.2 25314 17684 TRUE FALSE 28280.17484 27247.23983 27227.46251 24884.00672 22033.30378 29018.84711 20536.64769 21568.39413 27515.76596 17106.97253 1.653137327 1.592756391 1.591600294 1.454611953 1.287972126 1.69631693 1.200484052 1.260795509 1.608453274 1 14.06229684 -11.42821735 0.072441704 5.34E-11 2.124214665 0.500722164 0.156720602 117.3501611 1.222202827 30.37978126 9.712010559 3.73E-12 11.42821735 2.124214665 RLPSS(ph)PASPSPK ddPTM_A459_MK2206_30min_R1 2 RLPSSPASPSPK 12 1 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 RLPS(0.002)S(0.998)PASPSPK;RLPS(0.028)S(0.972)PASPSPK 174.94 0.00021971 61768000 8642.9 8191.4 7997.1 6491.1 8828.7 7908.1 10022 8853.9 7698 7744.7 TRUE FALSE 7907.775969 7658.138371 7454.279133 6991.045647 8477.034184 8355.849788 9353.450666 8776.491286 8498.234648 8704.171906 0.908504112 0.879823888 0.856403023 0.803183315 0.973904729 0.959982165 1.074593973 1.008308588 0.976340396 1 13.08749133 -6.428494281 4.424456366 1.005432635 0.863232374 0.765140334 0.03735153 0.114817368 3.85929149 0.012618793 0.014209648 3.73E-07 6.428494281 -0.142200262 RLPSS(ph)PASPSPK ddPTM_A459_MK2206_30min_R2 2 RLPSSPASPSPK 12 1 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 RLPS(0.261)S(0.739)PASPSPK;RLPS(0.115)S(0.885)PASPSPK 78.249 0.022746 89354000 144455 163413 185054 198599 158313 184091 186913 162797 211845 182084 TRUE FALSE 155514.5859 155298.148 191223.608 182372.8264 152096.8362 191096.712 162371.0986 184075.1269 230270.8952 176142.614 0.88289019 0.881661425 1.085618089 1.035370273 0.86348688 1.084897673 0.921816106 1.045034604 1.307298046 1 17.42638446 -8.00931479 20.918603 1.161155031 0.970896556 0.343946635 0.103584086 51.07374397 114692.4379 0.059370832 0.025889839 9.79E-09 8.00931479 -0.190258475 RLPSSPAS(ph)PSPK ddPTM_A459_MK2206_30min_R1 1 RLPSSPASPSPK 12 1 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 RLPSS(0.001)PAS(0.991)PS(0.009)PK 154.13 0.00080887 76626000 3480.6 3392.1 3179.7 3156.3 3096.6 2509.9 2928.7 2905 3091.8 3068.7 TRUE FALSE 3184.556693 3171.273673 2963.870823 3399.398773 2973.255865 2652.008369 2733.331767 2879.601891 3413.203674 3448.873724 0.923361349 0.919509941 0.859373541 0.985654751 0.862094731 0.768949107 0.792528804 0.834939787 0.989657479 1 11.75190959 -6.482373252 24.67950742 0.856485425 0.918145754 0.054058152 0.076543583 958.2686524 583861.5497 0.02387873 0.02707208 3.29E-07 6.482373252 0.061660328 RLPSSPAS(ph)PSPK ddPTM_A459_MK2206_30min_R2 1 RLPSSPASPSPK 12 1 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 RLPSSPAS(0.968)PS(0.032)PK 188.09 0.0002174 16397000 24112 23792 25500 23145 15445 19104 20826 15723 19968 21731 TRUE FALSE 25958.03326 22610.52388 26350.15727 21253.97946 14838.5517 19831.01611 18091.52118 17778.05009 21704.78055 21021.91925 1.234807962 1.075568962 1.253461064 1.011038964 0.705860941 0.943349457 0.860602734 0.845691103 1.032483299 1 14.35960677 -5.972404696 5.941084439 0.887618661 1.172492242 0.643803842 0.096067346 0.102401657 11.08490944 0.026219004 0.038489129 1.07E-06 5.972404696 0.28487358 RLPSSPASPS(ph)PK ddPTM_A459_MK2206_30min_R1 1 RLPSSPASPSPK 12 1 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 RLPSSPAS(0.013)PS(0.986)PK 72.662 0.029037 132950000 2912.5 3774.7 3350.2 2737.8 3432 2894.6 3044.1 3184.3 3079.1 3141.6 TRUE FALSE 2664.776581 3528.966344 3122.797758 2948.66583 3295.296173 3058.489751 2841.033643 3156.460001 3399.183464 3530.805126 0.754722078 0.999479217 0.884443533 0.835125623 0.933298796 0.866230121 0.804641871 0.893977404 0.962721913 1 11.78578148 -8.323867831 2.948680935 0.995942169 0.873750294 0.33408308 0.063387765 0.300081546 4.846903864 0.057609998 0.015935675 4.74E-09 8.323867831 -0.122191875 RLPSSPASPS(ph)PK ddPTM_A459_MK2206_30min_R2 3 RLPSSPASPSPK 12 1 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 RLPS(0.001)S(0.001)PAS(0.036)PS(0.962)PK;RLPSSPAS(0.027)PS(0.973)PK;RLPSSPAS(0.079)PS(0.921)PK 170.26 0.00056353 402990000 223894 232226 251594 207242 174773 173127 234902 204466 189224 258759 TRUE FALSE 241035.4968 220693.9945 259982.0184 190309.6657 167910.5339 179715.4693 204059.0852 231190.4082 205682.3615 250315.715 0.962925946 0.881662562 1.038616446 0.760278537 0.670795015 0.7179552 0.815206849 0.923595261 0.821691764 1 17.93338934 -5.771737994 24.99785897 0.802338333 0.953127751 0.31603897 0.096446022 238.9820296 580081.975 0.028278706 0.042469487 1.69E-06 5.771737994 0.150789419 RLQLS(ph)PWESSVVNR ddPTM_A459_MK2206_30min_R1 1 RLQLSPWESSVVNR 14 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 RLQLS(1)PWESSVVNR 92.633 0.0079362 7620900 2713.2 2232.2 2731.9 2560.4 2855 2728.3 2395.5 2466.8 1664.3 1379.6 TRUE FALSE 2482.428092 2086.883374 2546.46624 2757.602452 2741.279304 2882.773988 2235.700566 2445.233028 1837.309941 1550.515263 1.601034283 1.345928946 1.642335486 1.77850713 1.767979567 1.859236124 1.441908131 1.577045441 1.184967336 1 10.59853201 -8.335724771 1.560282748 0.993312207 1.647598258 0.695615699 0.144631632 0.226264279 1.104419432 0.149380072 0.044731414 4.62E-09 8.335724771 0.654286051 RLQSIGTENTEENR ddPTM_A459_MK2206_30min_R1 1 RLQSIGTENTEENR 14 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 120.9 0.0027054 11410000 945.73 845.61 817.01 933.93 1085.8 993.48 937.17 951.23 947.98 987.01 FALSE TRUE 865.2906973 790.5606353 761.5536375 1005.86145 1042.550287 1049.729979 874.6530993 942.9134964 1046.525913 1109.28825 0.780041344 0.712673766 0.686524569 0.906762918 0.939837131 0.946309473 0.788481352 0.850016663 0.943421075 1 10.11541859 -5.768158638 24.99012468 0.902047126 0.725039272 0.669248146 0.059145524 94.94552322 353120.5974 0.017225838 0.02621979 1.71E-06 5.768158638 -0.177007854 RLQSIGTENTEENR ddPTM_A459_MK2206_30min_R2 4 RLQSIGTENTEENR 14 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ;;; 201.76 7.43E-05 34230100 56947 51348 47438.7 59532 55546 51331 55683 50944.5 56815.9 53286.4 FALSE TRUE 61306.9061 48798.13299 49020.28258 54668.04517 53364.98494 53284.43717 48371.75521 57603.12107 61757.64428 51547.66913 1.189324506 0.946660321 0.950969916 1.060533795 1.035255053 1.033692465 0.938388797 1.117472856 1.19806861 1 15.65361957 -7.819571128 17.23069347 1.118347613 1.018908293 0.169805684 0.082426508 6.907243786 2044.987733 0.043412436 0.020854876 1.52E-08 7.819571128 -0.09943932 RLQSIGTENTEENRR ddPTM_A459_MK2206_30min_R2 1 RLQSIGTENTEENRR 15 2 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 63.727 0.045142 6516900 4505.8 13935 5678.8 10273 13882 9366.6 9613.9 9033.3 12746 8194.1 FALSE TRUE 4850.767512 13243.00816 5868.128358 9433.663038 13336.92293 9723.052526 8351.583382 10213.98333 13854.62404 7926.727188 0.611950859 1.670677929 0.740296495 1.190108202 1.682525791 1.226616269 1.053597933 1.288549875 1.747836618 1 12.95250961 -6.00169144 24.99832579 1.338126258 1.055821535 0.149524393 0.342239282 140.2474187 2072841.958 0.093567183 0.136526996 9.96E-07 6.00169144 -0.282304723 RLS(ph)AGLYR ddPTM_A459_MK2206_30min_R2 1 RLSAGLYR 8 1 B8ZZS2;Q13506-2;Q13506;H0Y4C5 B8ZZS2 NAB1 NGFI-A-binding protein 1 1 RLS(1)AGLYR 62.633 0.0475 4058500 5913.5 5658.1 4939.3 4582.5 5707.9 5089.1 4826.9 5853.1 4361.8 5402.1 TRUE FALSE 6366.242107 5377.126982 5103.973797 4208.095091 5483.779166 5282.769267 4193.122232 6618.120267 4741.18148 5225.829919 1.218226043 1.028951777 0.976681958 0.805249148 1.049360437 1.010895752 0.802383984 1.266424734 0.907259048 1 12.35144446 -4.766477822 2.869857696 0.978890089 1.265617885 0.250849236 0.124737544 0.627051574 6.99914506 0.031244944 0.43351709 1.71E-05 4.766477822 0.286727796 RLS(ph)APLPSSCGDPEK ddPTM_A459_MK2206_30min_R2 1 RLSAPLPSSCGDPEK 15 1 H0YKX0;Q96EP0-3;Q96EP0 H0YKX0 RNF31 E3 ubiquitin-protein ligase RNF31 1 RLS(1)APLPSSCGDPEK 123.76 0.0037764 0 15950 13178 16365 16578 12767 11670 13859 12111 12177 13078 TRUE FALSE 17171.14426 12523.59968 16910.60093 15223.52437 12265.70343 12114.11003 12039.29665 13693.94928 13236.13345 12651.26593 1.357266882 0.989908816 1.336672632 1.203320241 0.969523801 0.957541332 0.951627823 1.082417314 1.04622996 1 13.62699413 -6.253780461 22.28040658 1.000680353 1.213434877 0.538224668 0.099967703 107.4509753 312580.7191 0.028951465 0.0365342 5.57E-07 6.253780461 0.212754525 RLS(ph)AQFENLMAESR ddPTM_A459_MK2206_30min_R1 3 RLSAQFENLMAESR 14 1 Q9H7C4-2;Q9H7C4 Q9H7C4-2 SYNC Syncoilin 1 RLS(1)AQFENLMAESR;RLS(1)AQFENLMAESR;RLS(1)AQFENLMAESR 146.81 0.00025193 19641900 4452.72 7236.5 7217.3 6273.05 4079 3684.8 4321.7 4054.1 6016.9 5820.22 TRUE FALSE 4073.992782 6765.402535 6727.409785 6756.201398 3916.524793 3893.430192 4033.407278 4018.655431 6642.378287 6541.272794 0.622813466 1.034263934 1.028455776 1.032857306 0.598740477 0.59520988 0.616608939 0.614353744 1.015456547 1 12.67535567 -6.258494672 24.85099834 0.707364066 0.944135084 0.184854597 0.186594282 332.0202926 2801984.834 0.055754127 0.068872567 5.51E-07 6.258494672 0.236771019 RLS(ph)AQFENLMAESR ddPTM_A459_MK2206_30min_R2 2 RLSAQFENLMAESR 14 1 Q9H7C4-2;Q9H7C4 Q9H7C4-2 SYNC Syncoilin 1 RLS(1)AQFENLMAESR;RLS(1)AQFENLMAESR 137.52 0.00030099 10362000 10654 13177.4 11757.6 13665.9 14212.8 14285.4 17153.9 10288.9 12550.3 12524.9 TRUE FALSE 11469.67843 12523.02948 12149.59252 12549.35225 13654.73406 14829.04091 14901.57232 11633.69456 13641.90241 12116.21354 0.946638848 1.033576161 1.002754902 1.035748686 1.126980307 1.223900591 1.229886901 0.960175761 1.12592126 1 13.56465129 -6.114645615 3.338976712 1.120584675 0.999951135 0.292710803 0.081886179 0.332736305 6.922717709 0.026272268 0.035629707 7.68E-07 6.114645615 -0.12063354 RLS(ph)ASSTGSTR ddPTM_A459_MK2206_30min_R1 2 RLSASSTGSTR 11 1 P56945-6;A0A2R8Y6M6;A0A2R8Y5C9;A0A2R8Y8C4;A0A2R8YFS8;A0A2R8Y5E4;A0A2R8Y4C2;A0A2R8YFK2;A0A2R8Y596;P56945;P56945-8;P56945-2;P56945-3;P56945-5;P56945-7;P56945-4 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 RLS(0.89)AS(0.077)S(0.03)T(0.003)GSTR;RLS(0.62)AS(0.098)S(0.098)T(0.182)GS(0.002)TR 139.19 0.0021348 34577000 5872.6 6502.1 6353.3 6040.3 6787.8 6185.6 6007.3 5523.7 3819.5 4382.9 TRUE FALSE 5373.104532 6078.812108 5922.055697 6505.524953 6517.427553 6535.823327 5606.563978 5475.406873 4216.550693 4925.886741 1.090789296 1.23405438 1.202231397 1.320680985 1.323097321 1.326831831 1.138183696 1.111557606 0.855998303 1 12.26616774 -7.889184655 1.98965715 0.93468752 1.249893754 0.692046906 0.081018283 0.193572523 1.4494449 0.065286391 0.023916247 1.29E-08 7.889184655 0.315206234 RLS(ph)CSELSLYQPLQNSSK ddPTM_A459_MK2206_30min_R2 1 RLSCSELSLYQPLQNSSK 18 1 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 RLS(0.402)CS(0.402)ELS(0.173)LY(0.024)QPLQNSSK 52.162 0.042842 6419000 29775 35252 33194 41266 36314 34155 32820 22625 31833 34327 TRUE FALSE 32054.59689 33501.43694 34300.67139 37894.4358 34888.1299 35454.79246 28510.69458 25582.16518 34601.7768 33206.9128 0.965298915 1.008869362 1.032937678 1.14116106 1.050628527 1.067693124 0.85857709 0.770386737 1.04200523 1 15.01919598 -7.256886571 24.97073855 0.898607823 1.046971032 0.357525784 0.081559703 372.6585459 2043923.174 0.032030137 0.02393461 5.53E-08 7.256886571 0.148363209 RLS(ph)DCESTDVK ddPTM_A459_MK2206_30min_R2 3 RLSDCESTDVK 11 1 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 RLS(1)DCESTDVK;RLS(1)DCESTDVK;RLS(0.795)DCES(0.069)T(0.135)DVK 149.82 0.00032054 29426700 206252 207541 190482 191999 158159 140333 185467 139066 108210 131957 TRUE FALSE 222042.8117 197234.8157 196832.5748 176312.0675 151948.883 145673.4707 161114.9601 157242.4037 117621.9102 127651.2539 1.739448732 1.545106763 1.541955671 1.381201219 1.190343834 1.141183233 1.262149452 1.231812449 0.921431687 1 16.96184818 -2.810208729 0.240402106 0.971382241 3.682551996 0.879511429 0.084653731 9.278073133 0.212077792 0.125139241 8.837122987 0.001548072 2.810208729 2.711169755 RLS(ph)DEHEPEQR ddPTM_A459_MK2206_30min_R1 1 RLSDEHEPEQR 11 1 Q9UK59-2;Q9UK59 Q9UK59-2 DBR1 Lariat debranching enzyme 1 RLS(1)DEHEPEQR 104.55 0.0062661 25165000 1849.8 1714.6 1899.3 1682.6 1864.4 1580.1 1897.6 1716.3 1286.7 1475.6 TRUE FALSE 1692.464796 1602.979228 1770.380808 1812.194144 1790.137 1669.563897 1771.014566 1701.29457 1420.45707 1658.408468 1.020535549 0.966576847 1.06751795 1.092730879 1.079430692 1.006726587 1.067900098 1.025859794 0.85651822 1 10.69558367 -8.110181975 7.034220856 0.929423322 1.043225238 0.47171619 0.047959327 0.216759873 12.12551862 0.032917777 0.012293338 7.76E-09 8.110181975 0.113801917 RLS(ph)DEHEPEQR ddPTM_A459_MK2206_30min_R2 2 RLSDEHEPEQR 11 1 Q9UK59-2;Q9UK59 Q9UK59-2 DBR1 Lariat debranching enzyme 1 RLS(1)DEHEPEQR;RLS(1)DEHEPEQR 92.151 0.013046 51279000 44529 48435 37671 58727 58837 63400 52703 57176 52732 52266 TRUE FALSE 47938.17448 46029.78833 38926.93234 53928.81624 56526.76375 65812.73143 45783.03279 64649.09951 57318.53404 50560.5647 0.948133684 0.910389126 0.769906993 1.066618155 1.118001037 1.301661321 0.905508731 1.278646706 1.133660875 1 15.62572496 -5.920221404 5.587230773 1.131480374 0.880892957 0.469770269 0.117132158 0.169562997 8.918937508 0.032216506 0.048309902 1.20E-06 5.920221404 -0.250587417 RLS(ph)DPLLPSPEDETGSLVHLEDPER ddPTM_A459_MK2206_30min_R2 1 RLSDPLLPSPEDETGSLVHLEDPER 25 1 Q8WYL5-4;Q8WYL5;Q8WYL5-2;Q8WYL5-5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 RLS(0.994)DPLLPS(0.006)PEDETGSLVHLEDPER 65.854 0.001465 2336600 3069.8 3958.8 3023.2 4894.8 4941.8 3727.4 4288.9 3222.4 4468.5 5156.5 TRUE FALSE 3304.826248 3762.211749 3123.991979 4494.879182 4747.760101 3869.248819 3725.762278 3643.578744 4857.162053 4988.243827 0.662522997 0.754215688 0.626270906 0.901094521 0.951789902 0.775673554 0.746908613 0.730433169 0.973721859 1 12.28431627 -4.954091118 0.04815886 1.456787289 1.44E-13 0.411789286 0.097424758 290.7346842 2.333566567 24.94972618 48.13061963 1.11E-05 4.954091118 -1.456787289 RLS(ph)EGVEPWR ddPTM_A459_MK2206_30min_R2 2 RLSEGVEPWR 10 1 A0A3F2YNX6;Q92794;A0A3B3ITI3;A0A3B3IS53 A0A3F2YNX6 KAT6A Histone acetyltransferase KAT6A 1 RLS(1)EGVEPWR;RLS(1)EGVEPWR 93.649 0.012795 3633700 10722 13369.2 10993.7 10835.5 11043.2 8907.7 10005.6 9058.9 9832.5 9718.3 TRUE FALSE 11542.88456 12705.30497 11360.22447 9950.204989 10609.58848 9246.688765 8691.852701 10242.92933 10687.71308 9401.192667 1.227810659 1.351456716 1.208381199 1.058398157 1.128536437 0.9835655 0.924547875 1.089535094 1.13684651 1 13.19862808 -5.668558815 2.594337354 1.042085542 1.291623458 0.690626486 0.067774886 0.158413883 2.151482181 0.020713485 0.040601277 2.15E-06 5.668558815 0.249537916 RLS(ph)EQLAHTPTAFK ddPTM_A459_MK2206_30min_R2 1 RLSEQLAHTPTAFK 14 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 RLS(0.986)EQLAHT(0.014)PTAFK 69.289 0.031283 10623000 75186 64150 66386 66436 58690 55388 61269 48731 54681 56632 TRUE FALSE 80942.29797 60964.40428 68599.27611 61007.96628 56385.53571 57495.82915 53224.3067 55100.30902 59437.05454 54784.10248 1.47747785 1.112811957 1.252174865 1.113607115 1.029231714 1.049498423 0.971528314 1.005771867 1.084932523 1 15.74146969 -1.522878745 0.493440702 1.013858007 13.64301155 0.791062499 0.06595892 46.11724193 0.498892253 0.036258784 601.7010542 0.03 1.522878745 12.62915354 RLS(ph)ESLHVVDENKNESK ddPTM_A459_MK2206_30min_R2 1 RLSESLHVVDENKNESK 17 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RLS(0.869)ES(0.131)LHVVDENKNESK 49.216 0.042644 5061800 21169 32496 24394 33391 28429 20543 24250 20803 18046 21811 TRUE FALSE 22789.71492 30882.29589 25207.28378 30662.84849 27312.73462 21324.77826 21065.94587 23522.02353 19615.60846 21099.30886 1.080116656 1.463663862 1.194697132 1.453263171 1.294484801 1.010686104 0.998418764 1.114824362 0.929680142 1 14.36490812 -6.751516203 7.29687076 1.016655297 1.310226805 0.614232353 0.113275046 0.089265199 25.58454298 0.035951455 0.034375934 1.77E-07 6.751516203 0.293571508 RLS(ph)ESQLSFR ddPTM_A459_MK2206_30min_R1 2 RLSESQLSFR 10 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 RLS(0.998)ES(0.002)QLSFR;RLS(1)ESQLSFR 158.34 0.00085674 38472000 4383.04 4737.96 3837.18 3818.22 4185.43 4038.27 5410.45 5033.99 4685.23 4211.77 TRUE FALSE 4010.239432 4429.517943 3576.722913 4112.299966 4018.71546 4266.913358 5049.528752 4989.978356 5172.276425 4733.555865 0.847193853 0.935769656 0.755610162 0.868754924 0.848984479 0.90141819 1.066751697 1.054171219 1.092683085 1 12.20870863 -7.161338577 3.262252702 1.059404489 0.852682171 0.808549944 0.046596464 0.105015089 2.122780055 0.019058508 0.014130322 6.90E-08 7.161338577 -0.206722318 RLS(ph)ESQLSFR ddPTM_A459_MK2206_30min_R2 2 RLSESQLSFR 10 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 RLS(0.973)ES(0.027)QLSFR;RLS(0.999)ES(0.001)QLSFR 115.57 0.01186 31547000 64855 75081 62179 82133 81279 77014 112064 69606 94478 87008 TRUE FALSE 69820.34867 71352.58672 64252.01683 75422.47117 78087.57807 79944.82174 97349.86219 78703.74319 102695.5257 84168.93609 0.82952633 0.847730648 0.763369716 0.896084407 0.92774819 0.949813856 1.15660084 0.935068766 1.220111961 1 16.36100026 -6.67736727 1.151291662 1.076788305 0.819665275 0.639776984 0.080859374 0.286907819 0.807540025 0.037866114 0.037077528 2.10E-07 6.67736727 -0.257123031 RLS(ph)ESSALK ddPTM_A459_MK2206_30min_R1 2 RLSESSALK 9 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RLS(1)ESSALK;RLS(0.999)ES(0.001)SALK 174.23 0.00066722 64859000 6858 8396.2 7499.3 5628 5089.9 5694.4 6946.9 5592.4 8057.2 8835.2 TRUE FALSE 6274.691087 7849.605854 6990.26841 6061.469535 4887.158505 6016.812007 6483.484976 5543.506236 8894.774773 9929.771278 0.63190691 0.790512252 0.703970738 0.610433953 0.492172314 0.605936616 0.652933969 0.558271292 0.895768344 1 13.27754477 -8.407860564 4.139105707 0.99563106 0.633711534 0.739313389 0.076278787 0.117925109 3.191923948 0.081369881 0.021376555 3.91E-09 8.407860564 -0.361919527 RLS(ph)ESSALK ddPTM_A459_MK2206_30min_R2 1 RLSESSALK 9 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RLS(0.999)ES(0.001)SALK 134.38 0.0014868 28401000 85990 61725 72735 73124 54100 47920 69688 49641 41823 69181 TRUE FALSE 92573.46052 58659.82626 75159.9486 67149.53529 51975.76217 49743.62918 60537.88189 56129.24914 45460.68894 66923.62964 1.38327017 0.8765189 1.123070416 1.003375574 0.776642906 0.74328947 0.904581569 0.838705991 0.679292041 1 16.03022807 -6.083581194 3.419463313 0.816156811 1.100536799 0.483713315 0.141170023 0.217850078 4.862431145 0.041103283 0.056502825 8.25E-07 6.083581194 0.284379988 RLS(ph)FAVPFR ddPTM_A459_MK2206_30min_R2 1 RLSFAVPFR 9 1 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 1 RLS(1)FAVPFR 80.834 0.023309 1140200 4320.5 5347.7 5773.6 4090.4 4360.8 4412.9 5023.3 4744.7 3967.9 4703.4 TRUE FALSE 4651.280802 5082.140994 5966.088942 3756.201235 4189.573081 4580.836002 4363.734676 5364.848581 4313.02077 4549.928443 1.022275594 1.116971631 1.311248961 0.825551716 0.920799774 1.006792977 0.959077649 1.179106144 0.947931561 1 12.15162814 -5.76298638 24.99999978 0.982648184 1.146845991 0.356450824 0.106387894 49.17427255 794696.8307 0.030717673 0.048427263 1.73E-06 5.76298638 0.164197808 RLS(ph)GNEYVLSTK ddPTM_A459_MK2206_30min_R2 1 RLSGNEYVLSTK 12 1 O60658-6;O60658-2;O60658 O60658-6 PDE8A "High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8A" 1 RLS(1)GNEYVLSTK 132.23 0.0034359 4889500 17565 16057 16265 17136 15317 15845 19300 14861 21816 18697 TRUE FALSE 18909.78991 15259.63273 16807.26698 15735.93398 14715.57762 16447.99258 16765.88682 16803.38373 23713.51625 18086.91842 1.045495394 0.843683394 0.929249892 0.870017414 0.813603361 0.909386121 0.926962041 0.929035192 1.311086593 1 14.14265901 -8.133724028 7.040403779 1.153459435 0.901370968 0.54174495 0.091008546 0.16575679 8.578030206 0.057967114 0.021623844 7.35E-09 8.133724028 -0.252088467 RLS(ph)GVSSVDSAFSSR ddPTM_A459_MK2206_30min_R1 1 RLSGVSSVDSAFSSR 15 1 P57078-2;P57078 P57078-2 RIPK4 Receptor-interacting serine/threonine-protein kinase 4 1 RLS(0.978)GVS(0.016)S(0.006)VDSAFSSR 58.123 0.047372 3062100 608.91 752.57 985.48 761.8 674.36 573.03 734.68 742.31 585.76 579.99 TRUE FALSE 557.119007 703.5775562 918.5883633 820.473968 647.4988132 605.4744634 685.6708377 735.8200619 646.6518482 651.8435399 0.854682102 1.079365696 1.409216027 1.258697705 0.993334709 0.928864714 1.051894812 1.128829262 0.992035371 1 9.34838191 -6.279908326 24.26431708 1.01972326 1.163890458 0.17970333 0.13963298 1020.101809 1340196.116 0.04710821 0.053528836 5.25E-07 6.279908326 0.144167198 RLS(ph)IIGPTSR ddPTM_A459_MK2206_30min_R1 1 RLSIIGPTSR 10 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 RLS(1)IIGPTSR 72.891 0.034308 22175000 2449.2 2618.6 2444.7 2787 3030.2 2456.6 2353.6 2569 2147.2 1910.5 TRUE FALSE 2240.882679 2448.128664 2278.760575 3001.655223 2909.500717 2595.690569 2196.595638 2546.539504 2370.409124 2147.187164 1.043636399 1.140156157 1.061277104 1.397947638 1.355028927 1.208879511 1.023010791 1.185988603 1.103960178 1 11.06823224 -7.233684477 22.2415219 1.093738963 1.207963111 0.20812409 0.115431839 353.7968699 283516.185 0.048233683 0.037344746 5.84E-08 7.233684477 0.114224148 RLS(ph)IIGPTSR ddPTM_A459_MK2206_30min_R2 2 RLSIIGPTSR 10 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 RLS(1)IIGPTSR;RLS(1)IIGPTSR 80.905 0.02383 25210000 34377 37997 32331 36384 33023 28602 31810 22472 28836 30660 TRUE FALSE 37008.92955 36110.12423 33408.8994 33411.31081 31726.35109 29690.46915 27633.30879 25409.16756 31344.10316 29659.56671 1.247790634 1.217486573 1.126412254 1.126493557 1.069683566 1.001041905 0.931682821 0.856693822 1.05679572 1 14.8562099 -6.121533077 0.818576824 0.947596609 1.241747775 0.787078833 0.053367363 0.305703189 0.426399652 0.027776606 0.056403597 7.56E-07 6.121533077 0.294151166 RLS(ph)ITSLTGK ddPTM_A459_MK2206_30min_R1 1 RLSITSLTGK 10 1 G3V1S3;Q6ZUT9;Q6ZUT9-2 G3V1S3 DENND5B DENN domain-containing protein 5B 1 RLS(0.983)IT(0.016)S(0.001)LTGK 98.253 0.010144 17446000 4696.6 3695.8 3653.2 3006.8 4323.1 3204.6 4644 4291.9 4216.4 4110.3 TRUE FALSE 4297.129507 3455.202748 3405.230962 3238.384257 4150.901773 3386.041683 4334.207233 4254.376371 4654.709869 4619.514995 0.930212265 0.747957903 0.737140363 0.701022566 0.898557917 0.732986404 0.93823859 0.920957368 1.007618738 1 12.17352568 -7.536412312 1.459173783 0.994268933 0.784530703 0.569330384 0.073862123 0.306460493 1.248875759 0.051262549 0.023934829 2.91E-08 7.536412312 -0.20973823 RLS(ph)LESEGAGEGAAASPELSALEEAFR ddPTM_A459_MK2206_30min_R1 2 RLSLESEGAGEGAAASPELSALEEAFR 27 1 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 RLS(0.886)LES(0.114)EGAGEGAAASPELSALEEAFR;RLS(0.582)LES(0.418)EGAGEGAAASPELSALEEAFR 157.67 3.15E-17 33945000 2823.5 3016.2 2973.8 2778.1 3032 2779.2 3661.5 2754 3106.2 3391.8 TRUE FALSE 2583.346498 2819.844832 2771.946741 2992.069743 2911.22902 2936.555902 3417.248016 2729.922068 3429.100606 3812.001791 0.67768764 0.739728097 0.727163022 0.784907749 0.763700853 0.770344838 0.896444494 0.716138716 0.899553776 1 11.89633308 -14.52287869 0.073052206 1.810197125 0.502109448 0.725826366 0.05036224 148.5886088 0.774798383 19.7210807 2.236868558 3.00E-15 14.52287869 -1.308087677 RLS(ph)LGQGDSTEAATEER ddPTM_A459_MK2206_30min_R1 3 RLSLGQGDSTEAATEER 17 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RLS(1)LGQGDSTEAATEER;RLS(0.998)LGQGDST(0.002)EAATEER;RLS(1)LGQGDSTEAATEER 159.44 5.58E-05 60685000 4130.06 3350.96 3767.32 3147.49 4167.67 4368.37 4715.98 3574.41 3062.33 3326.02 TRUE FALSE 3778.776709 3132.811895 3511.604815 3389.910225 4001.662879 4615.703334 4401.385579 3543.15931 3380.670162 3738.072468 1.010889099 0.838082173 0.939415928 0.906860489 1.070515062 1.234781662 1.1774479 0.947857309 0.90438861 1 11.86807882 -6.263805872 23.78825357 1.068252934 0.918802934 0.287286249 0.100612516 140.1907246 1409215.721 0.033700198 0.04010438 5.45E-07 6.263805872 -0.14945 RLS(ph)LGQGDSTEAATEER ddPTM_A459_MK2206_30min_R2 1 RLSLGQGDSTEAATEER 17 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RLS(0.998)LGQGDS(0.001)T(0.001)EAATEER 78.225 0.034162 16119000 31284 24818 26344 30594 27780 30840 30125 21200 26262 27377 TRUE FALSE 33679.12709 23585.57421 27222.29581 28094.37233 26689.21762 32013.63781 26169.55131 23970.91279 28546.22129 26483.69073 1.271693112 0.890569764 1.027889054 1.060817868 1.007760508 1.208805757 0.988138382 0.905119797 1.077879272 1 14.69281657 -4.741131497 24.97468845 1.021858527 1.271694011 0.443235554 0.085041213 1495.243438 1838758.627 0.021472353 0.897286736 1.81E-05 4.741131497 0.249835484 RLS(ph)LPADIR ddPTM_A459_MK2206_30min_R1 2 RLSLPADIR 9 1 E5RJM2;E5RGN0;Q00536;Q00536-3;Q00536-2;A0A087WZU2;E5RIY8;H0YBX5;E5RIU4;Q00537-2;F5H6Z0;Q00537;F8VQZ9;F8VZY6 E5RJM2;Q00537-2 CDK16;CDK17 Cyclin-dependent kinase 16;Cyclin-dependent kinase 17 1 RLS(1)LPADIR;RLS(1)LPADIR 108.32 0.016428 76876000 9616.2 9167 10237 8322.4 9957.3 9455.1 10414.1 9476.7 9340.1 8622.3 TRUE FALSE 8798.291693 8570.226634 9542.140962 8963.39269 9560.679656 9990.439591 9719.394391 9393.846211 10311.03682 9690.495619 0.907930001 0.884395079 0.984690705 0.924967416 0.986603785 1.030952387 1.002982177 0.969387592 1.064036064 1 13.24235474 -5.657831151 0.676882257 1.015153774 0.876592146 0.636948163 0.031845427 0.816360956 0.587620794 0.01673894 0.074476352 2.20E-06 5.657831151 -0.138561628 RLS(ph)LPADIR ddPTM_A459_MK2206_30min_R2 3 RLSLPADIR 9 1 E5RJM2;E5RGN0;Q00536;Q00536-3;Q00536-2;A0A087WZU2;E5RIY8;H0YBX5;E5RIU4;Q00537-2;F5H6Z0;Q00537;F8VQZ9;F8VZY6 E5RJM2;Q00537-2 CDK16;CDK17 Cyclin-dependent kinase 16;Cyclin-dependent kinase 17 1 RLS(1)LPADIR;RLS(1)LPADIR;RLS(1)LPADIR 117.27 0.013622 73296200 149096.9 177605.5 153661.4 172542.2 175958 182475.4 197570 138733 154290.6 176944 TRUE FALSE 160511.8733 168785.8691 158784.3944 158444.9503 169049.0048 189419.6292 171628.8217 156865.8794 167710.5175 171170.3318 0.937731858 0.98606965 0.927639695 0.925656618 0.987606924 1.106614839 1.002678559 0.916431474 0.979787302 1 17.38507314 -6.409475347 6.290666942 1.001262739 0.946546523 0.254582702 0.046070644 0.397750454 19.43360371 0.01595595 0.018070732 3.90E-07 6.409475347 -0.054716216 RLS(ph)LPADIRLPEGYLEK ddPTM_A459_MK2206_30min_R1 1 RLSLPADIRLPEGYLEK 17 2 E5RJM2;E5RGN0;Q00536;Q00536-3;Q00536-2;A0A087WZU2;E5RIY8;H0YBX5;E5RIU4 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 RLS(1)LPADIRLPEGYLEK 59.983 0.024123 7077900 1438.6 1481.6 1724.1 1814.4 2172 1273.2 1705.9 1712.2 942.94 599.66 TRUE FALSE 1316.239516 1385.147571 1607.072896 1954.145402 2085.484641 1345.287484 1592.102524 1697.230416 1040.961987 673.950408 1.95302132 2.055266314 2.384556603 2.899538867 3.094418545 1.996122367 2.362343734 2.518331313 1.544567634 1 9.396498626 -8.440694768 3.048575818 1.008182024 2.420722044 0.63777313 0.353022213 0.15837261 2.949487162 0.370059605 0.099122846 3.62E-09 8.440694768 1.41254002 RLS(ph)LPGLLSQVS(ph)PR ddPTM_A459_MK2206_30min_R2 1 RLSLPGLLSQVSPR 14 1 Q96Q42-3;Q96Q42 Q96Q42-3 ALS2 Alsin 2 RLS(1)LPGLLS(0.019)QVS(0.981)PR 103.28 0.017138 781410 5153.4 4179.3 4002.5 6490.3 4874.4 4713.9 4147.9 2746.4 3567.4 4296.5 TRUE FALSE 5547.948266 3971.762039 4135.941352 5960.021729 4683.006564 4893.290768 3603.275747 3105.36391 3877.686004 4156.305557 1.334826853 0.955599146 0.995100407 1.433971022 1.12672336 1.17731738 0.866941975 0.747145239 0.932964613 1 12.021086 -7.263402913 23.46444952 0.865691685 1.162818579 0.473839551 0.145709317 66.50039875 794671.9228 0.059744378 0.042612262 5.45E-08 7.263402913 0.297126895 RLS(ph)LQPR ddPTM_A459_MK2206_30min_R2 2 RLSLQPR 7 1 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 RLS(1)LQPR;RLS(1)LQPR 103.7 0.0094797 11435800 27960 29951 26479 30361 23958 23999 24246 23329 28587 23631 TRUE FALSE 30100.6391 28463.67689 27361.79664 27880.40918 23017.28854 24912.29876 21062.47108 26378.1804 31073.44559 22859.92241 1.316742838 1.245134449 1.19693305 1.21961959 1.006883931 1.089780548 0.921371066 1.153905072 1.359297947 1 14.48053289 -6.117689324 5.697267556 1.0882683 1.245433613 0.316179662 0.112958938 0.312315844 13.40854699 0.035129203 0.045844759 7.63E-07 6.117689324 0.157165312 RLS(ph)LTLR ddPTM_A459_MK2206_30min_R2 3 RLSLTLR 7 1 Q00537-2;Q00537;F8VQZ9;F8VZY6;F8VUX2;F8W1S5 Q00537-2 CDK17 Cyclin-dependent kinase 17 1 RLS(0.921)LT(0.079)LR;RLS(0.997)LT(0.003)LR;RLS(0.974)LT(0.026)LR 89.029 0.016172 11454900 16472.9 17192.1 17707 21538.7 16216.6 21537.7 22003.9 18356.1 21604.1 18651.9 TRUE FALSE 17734.07789 16338.36531 18297.34254 19778.91931 15579.8548 22357.33227 19114.7615 20755.3053 23483.18557 18043.29003 0.982862763 0.905509211 1.014080166 1.096192506 0.86347084 1.239093992 1.059383376 1.150306028 1.301491332 1 14.1391748 -6.767243593 24.99994914 1.153782096 0.977896017 0.45210732 0.097636745 133.5777727 575343.2726 0.033116726 0.029984223 1.71E-07 6.767243593 -0.175886079 RLS(ph)LTMGGVQAR ddPTM_A459_MK2206_30min_R1 1 RLSLTMGGVQAR 12 1 O75815;O75815-3 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 RLS(0.997)LT(0.003)MGGVQAR 137.09 0.0024292 17834000 2416 3158.2 3068.3 2719.5 2969 2710.3 2841.3 2808.2 2101.3 2309.1 TRUE FALSE 2210.506513 2952.600606 2860.032345 2928.956361 2850.738443 2863.754844 2651.762061 2783.648203 2319.737655 2595.168741 0.851777566 1.13772972 1.102060263 1.128618851 1.098479031 1.103494659 1.021807183 1.072627055 0.893867754 1 11.34161263 -8.24530451 23.87073179 0.946933891 1.071399101 0.246062909 0.081672468 503.0532651 744246.5721 0.053911321 0.020214921 5.68E-09 8.24530451 0.124465211 RLS(ph)MEIEK ddPTM_A459_MK2206_30min_R1 3 RLSMEIEK 8 1 A0A5K1VW66;P35240-4;P35240-6;P35240-5;P35240-3;P35240;P35240-2;P35240-8 A0A5K1VW66 NF2 Merlin 1 RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK 108.98 0.0064908 54662700 8939.8 10278.6 10094.8 9138.6 9674.1 9751.3 10624.1 10626.6 10509.4 9377.9 TRUE FALSE 8179.423065 9609.461272 9409.593102 9842.456555 9288.760112 10303.41018 9915.385674 10533.69276 11601.88974 10539.70505 0.776058061 0.911739107 0.892775752 0.93384554 0.8813112 0.977580504 0.940765005 0.999429558 1.100779356 1 13.36354687 -5.719133198 0.323093593 1.045337482 0.747092796 0.677710378 0.046732332 2.426851978 0.324724177 0.053596473 0.271360504 1.91E-06 5.719133198 -0.298244686 RLS(ph)MEIEK ddPTM_A459_MK2206_30min_R2 3 RLSMEIEK 8 1 A0A5K1VW66;P35240-4;P35240-6;P35240-5;P35240-3;P35240;P35240-2;P35240-8 A0A5K1VW66 NF2 Merlin 1 RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK 84.821 0.018553 46710000 104853 113514 106732 112549 122410 109584 144556 98160 116921 117429 TRUE FALSE 112880.6263 107877.0598 110290.3916 103353.3867 117603.5683 113754.2959 125575.6236 110989.849 127090.5772 113597.3013 0.993691091 0.949644565 0.970889188 0.909822553 1.035267273 1.001382027 1.105445482 0.977046529 1.118781659 1 16.79356904 -6.346397651 7.894419512 1.040230113 0.956731209 0.439953967 0.04623597 0.276524835 23.13622591 0.013429346 0.0152334 4.50E-07 6.346397651 -0.083498904 RLS(ph)MENEELLWK ddPTM_A459_MK2206_30min_R1 2 RLSMENEELLWK 12 1 Q9ULD2;Q9ULD2-4;Q9ULD2-7;Q9ULD2-3;Q9ULD2-6;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RLS(1)MENEELLWK;RLS(1)MENEELLWK 152.34 0.00025589 33067000 10954.2 11721.5 11070.3 9305.7 11235.3 9986.9 11270.9 9999.8 10973.8 9472.2 TRUE FALSE 10022.48777 10958.42822 10318.87888 10022.42663 10787.77421 10552.34965 10519.03883 9912.372803 12114.56578 10645.68765 0.941459876 1.029377207 0.9693013 0.941454132 1.013346866 0.991232318 0.988103275 0.931116254 1.137978699 1 13.37798152 -8.252918638 24.99998427 1.068989354 0.978299627 0.426744442 0.043175988 505.2602852 1482451.67 0.028156162 0.010256028 5.59E-09 8.252918638 -0.090689727 RLS(ph)MENEELLWK ddPTM_A459_MK2206_30min_R2 3 RLSMENEELLWK 12 1 Q9ULD2;Q9ULD2-4;Q9ULD2-7;Q9ULD2-3;Q9ULD2-6;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RLS(1)MENEELLWK;RLS(1)MENEELLWK;RLS(1)MENEELLWK 107.82 0.0042703 7909800 60160 65200 61692 75958 67479 60604 76766 61788 53567 67827 TRUE FALSE 64765.89586 61962.26281 63748.78049 69751.98842 64829.43541 62910.32769 66686.53199 69863.90375 58226.16083 65613.81054 0.987077192 0.944347879 0.971575648 1.063068702 0.988045579 0.958797045 1.016349019 1.064774369 0.887407092 1 16.00171189 -5.545302606 24.98658755 0.999920605 0.963774776 0.068272789 0.048862514 528.2852337 588657.9259 0.012897613 0.022340927 2.85E-06 5.545302606 -0.036145829 RLS(ph)NVSLPGPGLSVPR ddPTM_A459_MK2206_30min_R2 1 RLSNVSLPGPGLSVPR 16 1 O94806;O94806-2;C9JKP8 O94806 PRKD3 Serine/threonine-protein kinase D3 1 RLS(0.905)NVS(0.095)LPGPGLSVPR 84.113 0.0089594 4028200 14610 11090 10176 12640 13418 12046 13411 8991.1 10331 12304 TRUE FALSE 15728.55283 10539.28673 10515.26276 11607.27157 12891.1419 12504.41897 11650.11959 10166.26764 11229.57171 11902.52149 1.321447128 0.885466725 0.883448333 0.975194338 1.083059746 1.050568905 0.97879425 0.854127224 0.943461578 1 13.53897961 -7.529032722 23.79284779 0.922568748 1.018920333 0.116014045 0.120759596 208.0697516 804421.5324 0.056860788 0.032966191 2.96E-08 7.529032722 0.096351585 RLS(ph)NVSLTGVSTIR ddPTM_A459_MK2206_30min_R1 1 RLSNVSLTGVSTIR 14 1 Q15139;F8WBA3;A0A494C0Q1 Q15139 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 RLS(0.998)NVS(0.001)LT(0.001)GVSTIR 110.6 0.0075407 18209000 3394.4 3000.2 3043.1 2841.2 3136.4 2834 2905.1 2939.7 2691.8 2785.9 TRUE FALSE 3105.688455 2804.886435 2836.542851 3060.029716 3011.470547 2994.458631 2711.30608 2913.998513 2971.622243 3131.038324 0.991903686 0.895832674 0.905943191 0.977321067 0.9618121 0.956378786 0.865944712 0.930681202 0.949085235 1 11.61242545 RLS(ph)NVSLTGVSTIR ddPTM_A459_MK2206_30min_R2 2 RLSNVSLTGVSTIR 14 1 Q15139;F8WBA3;A0A494C0Q1 Q15139 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 RLS(0.998)NVS(0.001)LTGVSTIR;RLS(0.914)NVS(0.034)LT(0.049)GVS(0.001)T(0.001)IR 145.94 0.00091122 26476000 51434 60411 49851 58265 59301 45615 56718 42639 50541 45261 TRUE FALSE 55371.82659 57411.07759 51513.00746 53504.56312 56972.54478 47350.91079 49270.85847 48212.0637 54936.96482 43784.13728 1.264654965 1.311230075 1.176522153 1.222007934 1.301214283 1.081462688 1.125312991 1.101130836 1.254723017 1 15.41812066 -6.764331525 24.99997896 1.119645768 1.252036025 0.517702607 0.068614555 67.36675513 582319.5018 0.023184828 0.021334419 1.72E-07 6.764331525 0.132390258 RLS(ph)PIMLGK ddPTM_A459_MK2206_30min_R2 1 RLSPIMLGK 9 1 Q6ICB0 Q6ICB0 DESI1 Desumoylating isopeptidase 1 1 RLS(1)PIMLGK 72.29 0.034837 4123800 45575 48716 48941 57594 60192 52843 58750 50900 53241 58735 TRUE FALSE 49064.25704 46296.83428 50572.66851 52888.38597 57828.55964 54853.97739 51036.05443 57552.80477 57871.80594 56818.48176 0.863526365 0.814819982 0.890074267 0.930830679 1.017777277 0.965424906 0.898229816 1.012924017 1.018538408 1 15.79407266 -5.752479453 2.085441361 0.980541377 0.840285541 0.718747476 0.036591722 0.176305841 1.563851056 0.011637816 0.022796219 1.77E-06 5.752479453 -0.140255836 RLS(ph)PPACTLR ddPTM_A459_MK2206_30min_R1 1 RLSPPACTLR 10 1 P28360 P28360 MSX1 Homeobox protein MSX-1 1 RLS(1)PPACTLR 81.525 0.023042 24942000 1728.2 1693.5 2103.2 1579 2311.7 2002.5 2085.3 2186.6 1489.4 771.36 TRUE FALSE 1581.207515 1583.252842 1960.440644 1700.614854 2219.620094 2115.879819 1946.193442 2167.482787 1644.22846 866.9219003 1.823933061 1.826292359 2.261380919 1.961670196 2.560346086 2.44068101 2.24494668 2.500205366 1.896628127 1 9.759758219 -8.578048649 8.404535588 1.000001437 2.204870051 0.678503859 0.249315598 1.112989164 169.6237079 0.258866807 0.066896562 2.64E-09 8.578048649 1.204868614 RLS(ph)PPSSSAASSYSFSDLNSTR ddPTM_A459_MK2206_30min_R1 2 RLSPPSSSAASSYSFSDLNSTR 22 1 P50402 P50402 EMD Emerin 1 RLS(0.985)PPS(0.006)S(0.002)S(0.007)AASSYSFSDLNSTR;RLS(0.999)PPS(0.001)SSAASSYSFSDLNSTR 119.37 1.69E-05 41564000 2801.1 3073.6 2249.65 2278.65 2618.4 2348.8 2816.2 2147 3027.2 2503.42 TRUE FALSE 2562.851736 2873.508081 2096.950026 2454.152018 2514.103583 2481.787026 2628.336436 2128.229005 3341.888273 2813.562569 0.910892035 1.02130591 0.745300655 0.872257843 0.893565905 0.882079913 0.934166691 0.75641787 1.187778196 1 11.45818233 -8.266273562 24.99612149 1.093889098 0.879887913 0.500180228 0.086686525 346.8637043 1793496.2 0.072100145 0.020945663 5.42E-09 8.266273562 -0.214001186 RLS(ph)PPSSSAASSYSFSDLNSTR ddPTM_A459_MK2206_30min_R2 2 RLSPPSSSAASSYSFSDLNSTR 22 1 P50402 P50402 EMD Emerin 1 RLS(0.996)PPS(0.002)S(0.002)SAASSYSFSDLNSTR;RLS(0.934)PPS(0.014)S(0.032)S(0.014)AAS(0.004)S(0.002)Y(0.001)SFSDLNSTR 97.059 9.71E-05 44190000 127930 83856 82110 87842 62395 88857 135555 69408 77814 97973 TRUE FALSE 137724.4192 79691.83298 84847.50642 80665.02761 59945.05879 92238.5154 117756.4657 78479.86391 84582.12106 94776.14903 1.453154834 0.840842699 0.895241126 0.851111049 0.632490974 0.973224976 1.242469407 0.828054998 0.892440998 1 16.53223642 -4.757509923 24.99986398 0.902819394 1.453155627 0.555779397 0.146666418 92.83721297 590563.679 0.038699551 0.285821886 1.75E-05 4.757509923 0.550336233 RLS(ph)PQLQHNITEDAYCETHLEPTR ddPTM_A459_MK2206_30min_R1 5 RLSPQLQHNITEDAYCETHLEPTR 24 1 Q8N7C3-2 Q8N7C3-2 1 RLS(0.498)PQLQHNIT(0.498)EDAY(0.005)CETHLEPTR;RLS(1)PQLQHNITEDAYCETHLEPTR;RLS(1)PQLQHNITEDAYCETHLEPTR;RLS(0.998)PQLQHNIT(0.002)EDAYCETHLEPTR;RLS(0.854)PQLQHNIT(0.146)EDAYCETHLEPTR 105.38 4.33E-07 27925600 5444.92 5616.67 5718.01 4721.55 5848.63 4784.56 5477.54 4833.01 4577.64 3705.58 TRUE FALSE 4981.800962 5251.023762 5329.887412 5085.204599 5615.666682 5055.457652 5112.143301 4790.755503 5053.502059 4164.655226 1.196209696 1.260854375 1.279790793 1.221038555 1.348410943 1.21389584 1.227506966 1.150336641 1.213426271 1 12.02398135 -9.066634546 0.538068049 0.989653446 1.259758043 0.719928975 0.045802993 1.025623826 0.513073299 0.071248037 0.021618878 8.58E-10 9.066634546 0.270104597 RLS(ph)PQLQHNITEDAYCETHLEPTR ddPTM_A459_MK2206_30min_R2 4 RLSPQLQHNITEDAYCETHLEPTR 24 1 Q8N7C3-2 Q8N7C3-2 1 RLS(0.828)PQLQHNIT(0.172)EDAYCETHLEPTR;RLS(0.999)PQLQHNIT(0.001)EDAYCETHLEPTR;RLS(0.997)PQLQHNIT(0.003)EDAYCETHLEPTR;RLS(0.939)PQLQHNIT(0.061)EDAYCETHLEPTR 110.16 2.63E-07 56796700 56928 75543 74618 91163 77415.1 74191 72031 70035 72415 73855 TRUE FALSE 61286.45145 71791.64447 77105.72688 83714.69128 74375.39419 77014.39049 62573.24318 79188.81497 78713.5258 71445.1174 0.857811614 1.004850255 1.07923018 1.171734253 1.041014374 1.077951766 0.875822526 1.108386659 1.101734152 1 16.1245478 -4.803102642 2.916751374 1.058203035 0.828806024 0.3942975 0.074299552 0.401293271 5.018726867 0.019744681 0.215079129 1.57E-05 4.803102642 -0.229397011 RLS(ph)PQPQIR ddPTM_A459_MK2206_30min_R1 1 RLSPQPQIR 9 1 J3QT39;Q49A88;A0A0A0MR27;Q49A88-2;Q49A88-3;Q49A88-5;Q49A88-6;C9JU82 J3QT39 CCDC14 Coiled-coil domain-containing protein 14 1 RLS(1)PQPQIR 84.188 0.018945 7252600 1031.2 1060.6 1220.4 965.6 1364.2 1040.3 1372.7 950.92 924.27 882.33 TRUE FALSE 943.491025 991.5547472 1137.562648 1039.970679 1309.861025 1099.200887 1281.129688 942.6062067 1020.351174 991.6397017 0.951445392 0.999914329 1.147153191 1.048738446 1.320904178 1.10846801 1.291930613 0.950553114 1.028953533 1 9.953672223 -5.133544145 3.690552511 1.121861538 0.959526101 0.188896101 0.113104211 0.370682798 8.806629047 0.029760695 0.096063918 7.35E-06 5.133544145 -0.162335437 RLS(ph)PQPQIR ddPTM_A459_MK2206_30min_R2 3 RLSPQPQIR 9 1 J3QT39;Q49A88;A0A0A0MR27;Q49A88-2;Q49A88-3;Q49A88-5;Q49A88-6;C9JU82 J3QT39 CCDC14 Coiled-coil domain-containing protein 14 1 RLS(1)PQPQIR;RLS(1)PQPQIR;RLS(1)PQPQIR 90.434 0.014657 56640500 37338.1 45072.7 35002.8 42121 41554 46098.2 39068.5 33777.7 35531.2 39276 TRUE FALSE 40196.73364 42834.45526 36169.77588 38679.57956 39922.38117 47852.4993 33938.75902 38192.56137 38621.63955 37994.42734 1.05796393 1.127387837 0.951975814 1.018032966 1.050743069 1.259460996 0.893256233 1.005214818 1.016508005 1 15.21350021 RLS(ph)PSNSSNENSPSIK ddPTM_A459_MK2206_30min_R1 1 RLSPSNSSNENSPSIK 16 1 O95936-3;O95936-2;O95936;O95936-4 O95936-3 EOMES Eomesodermin homolog 1 RLS(0.983)PS(0.017)NSSNENSPSIK 93.029 0.0053013 3021100 1816 1887.4 1978.3 1430.6 1635.4 1441.9 1597.8 1741.2 1767.4 1738 TRUE FALSE 1661.539664 1764.529917 1844.018508 1540.78506 1570.258555 1523.539132 1491.213677 1725.976872 1951.127555 1953.316561 0.850624879 0.903350717 0.944044885 0.788804585 0.803893535 0.779975536 0.763426526 0.883613494 0.998879339 1 10.93171006 -8.166714381 3.600213666 1.001671857 0.834932693 0.599822999 0.05332708 0.186593525 4.285849104 0.048699013 0.015874264 6.81E-09 8.166714381 -0.166739164 RLS(ph)PSNSSNENSPSIK ddPTM_A459_MK2206_30min_R2 1 RLSPSNSSNENSPSIK 16 1 O95936-3;O95936-2;O95936;O95936-4 O95936-3 EOMES Eomesodermin homolog 1 RLS(0.66)PS(0.336)NS(0.002)S(0.001)NENSPSIK 102.24 0.0025899 3200500 20328 23510 19283 23638 24975 19308 25695 18480 18523 19068 TRUE FALSE 21884.32731 22342.52759 19925.8856 21706.69979 23994.35601 20042.77947 22321.21563 20895.39945 20134.09706 18445.81272 1.186411661 1.211252002 1.080238962 1.176781967 1.300802322 1.086576112 1.21009662 1.132799068 1.091526698 1 14.17100574 -8.490903563 1.298508688 1.000673528 1.178534721 0.467033869 0.05984445 0.410325493 1.517337667 0.056386484 0.017299969 3.23E-09 8.490903563 0.177861193 RLS(ph)QISAGETEYNTQDSK ddPTM_A459_MK2206_30min_R2 1 RLSQISAGETEYNTQDSK 18 1 Q6ZS30-1;Q6ZS30;H7C3C8;H7BZA0 Q6ZS30-1 NBEAL1 Neurobeachin-like protein 1 1 RLS(0.845)QIS(0.154)AGET(0.001)EYNTQDSK 115.66 0.00054319 4177800 7194.5 10228 10647 8893.4 11415 11295 11040 9108.5 10283 8020.7 TRUE FALSE 7745.316452 9720.092393 11001.96567 8166.780771 10966.78974 11724.83914 9590.434739 10299.01222 11177.39675 7758.985216 0.998238331 1.25275305 1.41796451 1.052557847 1.413430937 1.511130491 1.236042404 1.327365878 1.440574565 1 12.92165226 -4.786927701 3.735495843 1.313379376 0.967116105 0.241591264 0.157776674 0.338302989 8.281450856 0.0381972 0.321950483 1.63E-05 4.786927701 -0.346263271 RLS(ph)QPAGGLLDSITNIFGR ddPTM_A459_MK2206_30min_R1 1 RLSQPAGGLLDSITNIFGR 19 1 Q676U5-4;Q676U5-3;Q676U5 Q676U5-4 ATG16L1 Autophagy-related protein 16-1 1 RLS(1)QPAGGLLDSITNIFGR 106.72 0.00041596 1661100 228 156.76 388.9 138.42 284.5 213.7 282.3 300.21 178.83 144.84 TRUE FALSE 208.6074027 146.5548955 362.5025515 149.0811324 273.1677626 225.7995093 263.4682821 297.5852956 197.4200184 162.7838727 1.281499201 0.900303532 2.22689475 0.915822495 1.678100896 1.387112283 1.618515875 1.828100602 1.212773816 1 7.346813966 RLS(ph)QPESAEK ddPTM_A459_MK2206_30min_R1 3 RLSQPESAEK 10 1 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 RLS(1)QPESAEK;RLS(1)QPESAEK;RLS(0.992)QPES(0.008)AEK 188.15 0.00033329 126065300 19187.8 17953.6 16987.9 15259.2 14353.3 12034.4 13000.5 12313.3 12302.8 10538.8 TRUE FALSE 17555.77685 16784.81738 15834.80868 16434.46623 13781.57767 12715.77733 12133.26037 12205.64612 13581.72009 11844.42611 1.482197338 1.41710685 1.336899613 1.387527439 1.163549634 1.073566352 1.024385669 1.030497046 1.146676079 1 13.53192068 -6.35851604 1.700034273 1.049747873 1.419336986 0.920919831 0.048708843 0.095391187 0.547627797 0.018154646 0.022505504 4.38E-07 6.35851604 0.369589113 RLS(ph)QPESAEK ddPTM_A459_MK2206_30min_R2 5 RLSQPESAEK 10 1 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 RLS(1)QPESAEK;RLS(1)QPESAEK;RLS(0.999)QPES(0.001)AEK;RLS(1)QPESAEK;RLS(1)QPESAEK 132.31 0.0012639 394089000 628769 749831 646227 647352 565095 461934 498748 408040 402603 406317 TRUE FALSE 676908.0381 712595.4829 667771.8856 594461.2708 542906.5309 479513.2221 433261.7885 461372.229 437620.6812 393058.9096 1.722154165 1.812948303 1.698910442 1.512397395 1.381234511 1.219952558 1.10228207 1.173799188 1.113371738 1 18.58438603 -6.284996144 0.879214595 1.088798982 1.805180519 0.970479833 0.048111198 0.092315714 0.153397634 0.024384287 0.038923414 5.19E-07 6.284996144 0.716381537 RLS(ph)QRPTPEELEQR ddPTM_A459_MK2206_30min_R2 2 RLSQRPTPEELEQR 14 2 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 RLS(0.5)QRPT(0.5)PEELEQR;RLS(0.874)QRPT(0.126)PEELEQR 83.53 0.0108 19991700 26411 35202 33156 40136 30713 36432 28360 23729 41682 37651 TRUE FALSE 28433.04647 33453.91987 34261.40449 36856.76041 29507.0533 37818.44529 24636.29793 26830.46177 45307.42502 36422.45095 0.78064616 0.918497218 0.940667187 1.011924224 0.810133655 1.038327853 0.676404176 0.736646246 1.243942234 1 15.15254039 -8.263182639 24.99990148 1.121971116 0.871189816 0.409906043 0.12350294 161.569369 2316946.006 0.101406428 0.031399498 5.46E-09 8.263182639 -0.2507813 RLS(ph)QSDEDVIR ddPTM_A459_MK2206_30min_R1 2 RLSQSDEDVIR 11 1 H0Y917;A0A499FIZ0;Q9H7D7-3;Q9H7D7-4;Q9H7D7-2;Q9H7D7 H0Y917 WDR26 WD repeat-containing protein 26 1 RLS(0.999)QS(0.001)DEDVIR;RLS(0.987)QS(0.013)DEDVIR 137.73 0.00067222 62605000 4095.4 3663.4 3538.3 3399.4 4179.2 3893.2 4207.9 3923.8 3191.1 2972.7 TRUE FALSE 3747.064724 3424.911994 3298.130054 3661.222377 4012.733614 4113.62962 3927.198669 3889.49463 3522.826264 3340.980519 1.121546415 1.025121809 0.987174285 1.095852657 1.201064655 1.231264174 1.175462906 1.164177585 1.054428855 1 11.70605586 -6.002588932 9.266960484 1.152181146 1.042373918 0.23850852 0.07187337 0.125636076 166.0150134 0.020601417 0.02906973 9.94E-07 6.002588932 -0.109807229 RLS(ph)QSDEDVIR ddPTM_A459_MK2206_30min_R2 6 RLSQSDEDVIR 11 1 H0Y917;A0A499FIZ0;Q9H7D7-3;Q9H7D7-4;Q9H7D7-2;Q9H7D7 H0Y917 WDR26 WD repeat-containing protein 26 1 RLS(0.927)QS(0.073)DEDVIR;RLS(0.835)QS(0.165)DEDVIR;RLS(0.985)QS(0.015)DEDVIR;RLS(0.951)QS(0.049)DEDVIR;RLS(0.996)QS(0.004)DEDVIR;RLS(0.999)QS(0.001)DEDVIR 175.6 3.86E-05 141993000 123771 138577 127357 151203 149510 155741 136221 115998.5 140404 136911 TRUE FALSE 133247.0029 131695.4677 131603.0188 138849.2312 143639.4862 161667.8329 118335.0191 131159.9022 152616.0861 132443.6053 1.00606596 0.994351274 0.99365325 1.048364932 1.084533193 1.220654123 0.893474765 0.99030755 1.152309965 1 17.01501866 -5.807118541 5.262349685 1.057098535 0.997478495 0.089614562 0.084374588 0.509836223 31.79068774 0.024839709 0.038479369 1.56E-06 5.807118541 -0.059620039 RLS(ph)SASTGKPPLSVEDDFEK ddPTM_A459_MK2206_30min_R1 1 RLSSASTGKPPLSVEDDFEK 20 2 O75152;A0A1B0GTU1;A0A494C0C4 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 RLS(0.876)S(0.03)AS(0.054)T(0.04)GKPPLSVEDDFEK 69.771 0.013271 16139000 2886.3 3412.9 3089.1 2426.7 2011.9 1965.1 1956.5 1850.2 1783.2 1643.7 TRUE FALSE 2640.805028 3190.71959 2879.420499 2613.604854 1931.761763 2076.362264 1825.985455 1834.023896 1968.570021 1847.333965 1.429522262 1.727202363 1.55868974 1.414798246 1.045702509 1.123977745 0.988443611 0.992794985 1.065627579 1 10.85122899 -6.130764946 2.220648445 1.029287076 1.590490221 0.909067761 0.077980101 0.080763061 0.782654198 0.024639132 0.03473336 7.40E-07 6.130764946 0.561203145 RLS(ph)SASTGKPPLSVEDDFEK ddPTM_A459_MK2206_30min_R2 2 RLSSASTGKPPLSVEDDFEK 20 2 O75152;A0A1B0GTU1;A0A494C0C4 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 RLS(0.405)S(0.405)AS(0.152)T(0.038)GKPPLSVEDDFEK;RLS(0.797)S(0.166)AS(0.036)TGKPPLSVEDDFEK 90.755 0.00064338 19822100 157705 160084 144331 138754 118696 93229 120193 90335 82439 104875 TRUE FALSE 169779.0161 152134.4613 149142.9235 127417.3543 114035.3986 96776.89492 104411.5147 102142.0947 89609.3952 101452.9373 1.673475609 1.49955699 1.470070039 1.25592573 1.124022642 0.953909246 1.029162067 1.006792877 0.883260727 1 16.63045111 -5.865522236 0.886441318 0.960528063 1.664402596 0.962501157 0.049826659 0.120894844 0.182263288 0.0216051 0.06014503 1.36E-06 5.865522236 0.703874533 RLS(ph)SDCSVTQER ddPTM_A459_MK2206_30min_R1 2 RLSSDCSVTQER 12 1 E7EX48;P51957-3;P51957-2;P51957 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 RLS(0.972)S(0.021)DCS(0.007)VTQER;RLS(0.974)S(0.025)DCS(0.001)VTQER 179.65 0.00018657 15615900 4269.9 4554 4356.6 3960.1 4597.2 4162.8 4083.8 3900.1 3356.5 2902.2 TRUE FALSE 3906.722583 4257.533772 4060.88613 4265.107588 4414.083789 4398.494139 3811.377153 3866.001837 3705.420186 3261.746446 1.197739508 1.305292684 1.245003619 1.307614696 1.353288449 1.348508908 1.168508103 1.185255169 1.136023369 1 11.67142892 -8.243697202 0.931757382 1.009560311 1.291000363 0.744544367 0.052874397 0.275848176 0.498445746 0.052621577 0.01887466 5.71E-09 8.243697202 0.281440052 RLS(ph)SDCSVTQER ddPTM_A459_MK2206_30min_R2 2 RLSSDCSVTQER 12 1 E7EX48;P51957-3;P51957-2;P51957 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 RLS(0.987)S(0.009)DCS(0.005)VTQER;RLS(0.923)S(0.077)DCSVTQER 98.654 0.038575 0 35603 45156 45613 45387 45649 38504 36258 25644 40959 32156 TRUE FALSE 38328.79305 42913.6187 47133.71465 41678.73691 43856.59089 39969.2967 31497.28105 28995.75885 44521.53978 31106.75235 1.23216955 1.379559596 1.515224544 1.339861405 1.409873663 1.284907413 1.012554467 0.93213713 1.431250015 1 14.92494016 -7.076136564 4.20928246 1.090148747 1.37955592 0.469812088 0.140990307 0.200078357 6.637827868 0.05443555 0.042407837 8.39E-08 7.076136564 0.289407173 RLS(ph)SFVTK ddPTM_A459_MK2206_30min_R2 1 RLSSFVTK 8 1 P27708;F8VPD4;H7C3Z5 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 RLS(0.5)S(0.5)FVTK 80.014 0.024215 3728800 21548 27971 24557 26615 30087 23321 32108 23340 23997 25488 TRUE FALSE 23197.73145 26582.00081 25375.71812 24440.46936 28905.6332 24208.497 27892.18103 26390.61814 26084.21568 24656.32865 0.940842888 1.078100523 1.029176666 0.991245279 1.172341333 0.981837051 1.131238208 1.070338513 1.057911584 1 14.58967038 -4.75603759 24.97825739 1.059773269 0.940842699 0.264502394 0.057886893 223.1279582 1031648.283 0.013539949 0.113863327 1.75E-05 4.75603759 -0.11893057 RLS(ph)SSESPQR ddPTM_A459_MK2206_30min_R1 2 RLSSSESPQR 10 1 J3KS33;Q9H2G4 J3KS33 TSPYL2 Testis-specific Y-encoded-like protein 2 1 RLS(0.919)S(0.04)S(0.04)ESPQR;RLS(0.836)S(0.081)S(0.081)ES(0.001)PQR 111.52 0.014008 1584300 3066.1 3664 3681.7 2764.8 3782.6 3408.7 3375 3061.6 2908.3 2569.1 TRUE FALSE 2805.312094 3425.472934 3431.796462 2977.745375 3631.931032 3601.697648 3149.859908 3034.832754 3210.628192 2887.379504 0.9715772 1.18636048 1.188550538 1.031296846 1.257864104 1.247393231 1.090906098 1.051068192 1.11195227 1 11.49554503 -7.508474586 23.80077658 1.06310353 1.152145774 0.185668561 0.087445397 628.0559493 1037779.234 0.038220551 0.02464138 3.10E-08 7.508474586 0.089042243 RLS(ph)SSSATLLNSPDR ddPTM_A459_MK2206_30min_R2 1 RLSSSSATLLNSPDR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 RLS(0.921)S(0.057)S(0.015)S(0.004)AT(0.004)LLNSPDR 84.41 0.039108 5917800 14957 19546 15593 18131 14933 15844 17690 12451 13790 20464 TRUE FALSE 16102.11942 18575.37406 16112.86284 16649.6393 14346.65539 16446.95452 15367.28175 14078.38845 14989.42927 19796.26136 0.81339194 0.938327381 0.813934639 0.841049681 0.724715396 0.830811143 0.776271917 0.711164002 0.757184854 1 14.27294037 -6.057592349 8.588846112 0.785560067 0.857668903 0.071506938 0.082789382 0.723091204 102.3549756 0.023137147 0.030037831 8.76E-07 6.057592349 0.072108836 RLS(ph)STSLASGHSVR ddPTM_A459_MK2206_30min_R1 4 RLSSTSLASGHSVR 14 1 Q9BZL6-2;Q9BZL6;Q9BZL6-3;M0QZ82 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 RLS(0.858)S(0.135)T(0.007)SLASGHSVR;RLS(0.849)S(0.122)T(0.029)SLASGHSVR;RLS(0.849)S(0.13)T(0.021)SLASGHSVR;RLS(0.94)S(0.056)T(0.004)SLASGHSVR 132.5 0.00041217 104086000 4855.34 3948.9 4106.68 3084.05 5928.4 5729.4 6552 5471.11 3799.62 3916.66 TRUE FALSE 4442.367837 3691.825892 3827.930003 3321.584065 5692.259274 6053.793677 6114.928035 5423.276662 4194.604096 4401.88541 1.009196611 0.838691958 0.869611461 0.754582129 1.293141176 1.375272892 1.389161113 1.232034948 0.952910788 1 12.10390587 -6.266594881 24.9951118 1.236201595 0.866039274 0.556622079 0.146873817 308.8464899 1497360.189 0.046546031 0.054367651 5.41E-07 6.266594881 -0.370162321 RLS(ph)STSLASGHSVR ddPTM_A459_MK2206_30min_R2 5 RLSSTSLASGHSVR 14 1 Q9BZL6-2;Q9BZL6;Q9BZL6-3;M0QZ82 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 RLS(0.948)S(0.049)T(0.003)SLASGHSVR;RLS(0.963)S(0.036)T(0.001)SLASGHSVR;RLS(0.95)S(0.048)T(0.002)SLASGHSVR;RLS(0.866)S(0.13)T(0.003)SLASGHSVR;RLS(0.836)S(0.139)T(0.024)SLASGHSVR 128.82 0.00056638 180078100 35673.4 61083.8 51432.7 67300.5 60581.9 68494 61455.5 58194.3 71879 50608.3 TRUE FALSE 38404.58293 58050.46732 53147.44055 61801.83387 58203.15021 71100.58717 53386.31903 65800.49482 78130.90549 48956.95532 0.784456114 1.185745048 1.085595299 1.262370862 1.188863765 1.45230819 1.090474656 1.344047938 1.595910223 1 15.57922622 -4.148014871 0.750012161 1.294774855 2.39E-13 0.40418655 0.169661596 6.401287198 1.391248407 0.063211783 8.693661832 7.11E-05 4.148014871 -1.294774855 RLS(ph)TIFEECDEELER ddPTM_A459_MK2206_30min_R1 1 RLSTIFEECDEELER 15 1 Q5T5P2-3;Q5T5P2;A0A0U1RRK8 Q5T5P2-3 KIAA1217 Sickle tail protein homolog 1 RLS(0.891)T(0.109)IFEECDEELER 69.188 0.028389 3051200 859.46 787.44 774.94 582.31 598.12 672.05 652.25 700.12 652.16 474.21 TRUE FALSE 786.3584138 736.1775129 722.3392319 627.1596171 574.2956139 710.1008902 608.7395926 693.9989247 719.9543658 532.9587149 1.475458402 1.381303077 1.355338062 1.176750843 1.077561165 1.332375042 1.142189021 1.302162635 1.350863295 1 9.05787997 -5.584856365 3.181326084 1.208574087 1.422126362 0.441363882 0.107583848 0.241828244 4.936931588 0.029886524 0.059206108 2.60E-06 5.584856365 0.213552275 RLS(ph)TPQR ddPTM_A459_MK2206_30min_R1 2 RLSTPQR 7 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 RLS(0.831)T(0.169)PQR;RLS(0.831)T(0.169)PQR 71.614 0.032676 27142500 3196.48 3012.27 3217.52 2688.61 3348.69 2920.27 3185.34 3242.74 2172.3 2484.03 TRUE FALSE 2924.602591 2816.170675 2999.123707 2895.687208 3215.304586 3085.613164 2972.851781 3214.389066 2398.118359 2791.77039 1.047579916 1.008740076 1.074273055 1.037222552 1.151708105 1.105253202 1.064862566 1.15138017 0.858995556 1 11.44696458 -8.261914158 24.99999997 0.929497777 1.078837283 0.555398439 0.053898162 31.3849517 1652344.457 0.042657084 0.013595842 5.47E-09 8.261914158 0.149339506 RLS(ph)TSPDVIQGHQPR ddPTM_A459_MK2206_30min_R2 2 RLSTSPDVIQGHQPR 15 1 Q9Y385 Q9Y385 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 1 RLS(0.978)T(0.019)S(0.003)PDVIQGHQPR;RLS(0.994)T(0.003)S(0.003)PDVIQGHQPR 166.36 5.38E-06 14585000 35577 16689.2 17599.7 22724 11775 24114 29980 13139.6 21035.5 17098.5 TRUE FALSE 38300.80247 15860.4386 18186.46521 20867.37651 11312.65434 25031.67517 26043.58999 14856.99083 22865.12977 16540.57735 2.315566239 0.958880592 1.099506071 1.261586949 0.683933462 1.513349543 1.574527264 0.898214768 1.382365881 1 14.01372197 -4.755295826 24.99089043 1.160881592 2.315568144 0.627788254 0.268600305 134.6016839 547482.925 0.066594309 0.597965737 1.76E-05 4.755295826 1.154686552 RLS(ph)VELTSSLFR ddPTM_A459_MK2206_30min_R1 1 RLSVELTSSLFR 12 1 A0A2R8Y6G0;A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8YG06;A0A2R8Y7Z0 A0A2R8Y6G0 CTNNB1 Catenin beta-1 1 RLS(1)VELTSSLFR 73.296 0.028056 23113000 1082.9 1074.2 894.2 725.43 1005.2 1278.6 932.79 1003.6 965.56 966.89 TRUE FALSE 990.7936685 1004.269385 833.5041954 781.3027443 965.1607555 1350.993227 870.5652811 994.825631 1065.933417 1086.675633 0.911765791 0.924166655 0.767022072 0.718984323 0.888177416 1.243235043 0.801127084 0.915476156 0.980912229 1 10.08570565 -6.530828516 24.99995506 0.9816815 0.829010407 0.288650797 0.117294892 262.9742242 826978.5879 0.039931437 0.040000682 2.95E-07 6.530828516 -0.152671093 RLS(ph)YNTASNK ddPTM_A459_MK2206_30min_R1 1 RLSYNTASNK 10 1 P49207 P49207 RPL34 60S ribosomal protein L34 1 RLS(0.927)YNT(0.071)AS(0.002)NK 98.368 0.035262 7929700 2000.7 1819.6 2323.2 1804.9 1500.3 1876.5 1674.9 1723.4 1429.3 1263.9 TRUE FALSE 1830.529959 1701.143709 2165.507657 1943.913711 1440.539874 1982.745808 1563.170477 1708.332495 1577.88085 1420.481474 1.288668661 1.197582468 1.52448849 1.368489309 1.014120846 1.395826587 1.100451154 1.202643278 1.11080706 1 10.4721643 -7.826386975 0.434777155 0.999304727 1.33842338 0.3671427 0.130280581 1.154548464 0.570926315 0.149682501 0.114753116 1.49E-08 7.826386975 0.339118653 RLSDCES(ph)TDVK ddPTM_A459_MK2206_30min_R1 1 RLSDCESTDVK 11 1 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 RLS(0.361)DCES(0.489)T(0.151)DVK 94.547 0.039698 4787000 2305.6 2673.9 2393.7 1782.9 1511.6 1634.7 1278.6 1165.2 1458.5 1328.9 TRUE FALSE 2109.496613 2499.828624 2231.222313 1920.219267 1451.389771 1727.255301 1193.306927 1155.012779 1610.116294 1493.534165 1.412419389 1.673767285 1.493921174 1.28568821 0.971782103 1.156488644 0.798982009 0.773342054 1.078057893 1 10.54451452 -6.078025931 1.485904374 0.930367547 1.564981405 0.809016157 0.123789783 0.161380894 0.716983281 0.044391605 0.072076222 8.36E-07 6.078025931 0.634613858 RLSDS(ph)PVFDAPPSPPDSLSDR ddPTM_A459_MK2206_30min_R1 2 RLSDSPVFDAPPSPPDSLSDR 21 1 P47974 P47974 ZFP36L2 "Zinc finger protein 36, C3H1 type-like 2" 1 RLS(0.006)DS(0.994)PVFDAPPSPPDSLSDR;RLS(0.065)DS(0.935)PVFDAPPSPPDSLSDR 148.72 1.22E-06 10653100 2016.16 1759.67 1749.44 1351.32 2143.34 1915.75 1952 1810.49 1820.6 1653.79 TRUE FALSE 1844.675005 1645.115163 1630.692887 1455.398901 2057.966229 2024.218109 1821.785642 1794.661077 2009.857885 1858.673991 0.992468294 0.885101514 0.87734207 0.783030756 1.107222805 1.08906571 0.980153405 0.965559902 1.081339651 1 10.86005803 -6.268188324 24.99561693 1.035240171 0.884019391 0.57514204 0.064297164 416.4150539 1542246.326 0.020760921 0.024070124 5.39E-07 6.268188324 -0.15122078 RLSDS(ph)PVFDAPPSPPDSLSDR ddPTM_A459_MK2206_30min_R2 2 RLSDSPVFDAPPSPPDSLSDR 21 1 P47974 P47974 ZFP36L2 "Zinc finger protein 36, C3H1 type-like 2" 1 RLS(0.08)DS(0.92)PVFDAPPSPPDSLSDR;RLS(0.009)DS(0.991)PVFDAPPSPPDSLSDR 131.75 2.50E-05 11571700 53894 57436 57096 72357 56866 59309 64540 55939 46786 57814 TRUE FALSE 58020.16608 54583.81176 58999.55214 66445.20164 54633.15511 61566.04555 56065.82047 63250.41937 50855.36171 55927.53391 1.03741685 0.975973871 1.054928548 1.18805885 0.976856144 1.10081817 1.002472602 1.130935247 0.909308138 1 15.7712711 -8.271557361 24.96600248 0.954654071 1.056716302 0.276483312 0.067105763 1006.76969 2484162.194 0.059894523 0.016206612 5.35E-09 8.271557361 0.102062231 RLSELLR ddPTM_A459_MK2206_30min_R1 2 RLSELLR 7 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 128.61 0.0066773 16644400 4426.8 4537.8 4722.3 4133.6 4833.5 4206.3 5061.9 3981.6 3880.9 3043.8 FALSE TRUE 4050.277414 4242.388395 4401.763433 4451.970588 4640.97146 4444.457071 4724.229887 3946.789291 4284.333443 3420.888924 1.183983901 1.240142106 1.286730885 1.301407525 1.356656578 1.299211161 1.380994821 1.153732079 1.252403553 1 11.74015555 -8.919790534 1.016588948 1.000992121 1.287872918 0.62103337 0.064851146 0.899835182 1.522194256 0.064453651 0.02053345 1.20E-09 8.919790534 0.286880796 RLSELLR ddPTM_A459_MK2206_30min_R2 2 RLSELLR 7 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 118.74 0.014409 7086500 14142.5 15810.6 17151.2 18466.2 15156.9 16677.4 16740.2 12942.5 15390.3 16034.6 FALSE TRUE 15225.26067 15025.46859 17723.01245 16957.45239 14561.76395 17312.07014 14542.19163 14634.12919 16728.92047 15511.39232 0.981553452 0.968673107 1.142580375 1.093225679 0.938778651 1.11608744 0.937516848 0.943443947 1.078492513 1 13.92104057 -7.282280503 24.98189488 0.985150332 1.039361554 0.105188225 0.071301849 1944.733346 2331110.652 0.030383621 0.020517349 5.22E-08 7.282280503 0.054211222 RLSLPGLLSQVS(ph)PR ddPTM_A459_MK2206_30min_R1 2 RLSLPGLLSQVSPR 14 1 Q96Q42-3;Q96Q42 Q96Q42-3 ALS2 Alsin 1 RLSLPGLLSQVS(1)PR;RLSLPGLLSQVS(1)PR 142.58 0.00027978 14623600 5237.5 5292.4 5909.4 6525.1 6282.1 5447.9 5832.8 5983.6 4599.5 3580.4 TRUE FALSE 4792.023122 4947.863798 5508.286393 7027.664333 6031.870654 5756.35539 5443.704555 5931.286016 5077.634484 4023.966983 1.190870388 1.229598508 1.368869679 1.746451788 1.49898612 1.43051755 1.352820383 1.473989732 1.261847949 1 11.97440275 -8.587691317 3.368972057 1.000262646 1.416104888 0.429660708 0.14553977 0.313288322 9.327649206 0.15442394 0.040811295 2.58E-09 8.587691317 0.415842242 RLSQPES(ph)AEK ddPTM_A459_MK2206_30min_R1 1 RLSQPESAEK 10 1 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 RLS(0.463)QPES(0.537)AEK 128.36 0.0056216 8170500 3959.8 4042.7 3265.9 2994.1 2765.1 2937.5 2606.9 3127.4 2599.4 2311.8 TRUE FALSE 3622.998216 3779.519495 3044.219807 3224.706101 2654.960212 3103.818711 2432.998458 3100.057472 2869.616932 2598.203237 1.394424487 1.45466661 1.171663465 1.241129275 1.021844702 1.194601972 0.936415759 1.193154341 1.104462072 1 11.34329857 -5.458399207 1.164800603 1.084160477 1.464363464 0.670341275 0.090290332 0.371240854 0.84122852 0.028779417 0.129498515 3.48E-06 5.458399207 0.380202986 RLSS(ph)SESPQR ddPTM_A459_MK2206_30min_R2 1 RLSSSESPQR 10 1 J3KS33;Q9H2G4 J3KS33 TSPYL2 Testis-specific Y-encoded-like protein 2 1 RLS(0.184)S(0.393)S(0.393)ES(0.029)PQR 96.067 0.039675 2489700 17706 16431 14420 15986 15318 17804 15245 15348 16612 15518 TRUE FALSE 19061.58497 15615.06043 14900.7556 14679.89266 14716.53835 18481.5437 13243.31319 17354.0363 18056.88173 15011.64893 1.269786221 1.040196217 0.992612848 0.977900078 0.980341228 1.23114681 0.882202431 1.156037979 1.202857982 1 13.87379484 RLSS(ph)SSAT(ph)LLNSPDR ddPTM_A459_MK2206_30min_R1 1 RLSSSSATLLNSPDR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 2 RLS(0.19)S(0.439)S(0.198)S(0.29)AT(0.738)LLNS(0.146)PDR 97.129 0.019658 0 3042.2 2772.7 3040.6 2392.1 3256.8 2476.1 3111.4 2832.2 2146.3 1938.9 TRUE FALSE 2783.444915 2592.196726 2834.212544 2576.339956 3127.07476 2616.294642 2903.844183 2807.438374 2369.415566 2179.10557 1.27733367 1.189569134 1.300631132 1.182292401 1.435026739 1.200627761 1.332585361 1.288344361 1.087333995 1 11.08952038 -8.396595383 3.340301989 1.003653182 1.275557425 0.633318356 0.071959258 0.139833422 2.784891841 0.065401465 0.017473074 4.01E-09 8.396595383 0.271904243 RLSSSSATLLNS(ph)PDR ddPTM_A459_MK2206_30min_R1 2 RLSSSSATLLNSPDR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 RLSSSSATLLNS(1)PDR;RLSSSSATLLNS(1)PDR 145.94 0.00063423 13115900 3414.8 2948.3 2434.9 2919.2 2845.1 2800.6 3157.9 2590.6 2534.8 1973.19 TRUE FALSE 3124.353328 2756.365134 2269.625772 3144.03729 2731.773642 2959.167552 2947.242253 2567.950657 2798.301531 2217.643674 1.408861741 1.242925167 1.023440239 1.417737812 1.231836149 1.334374673 1.328997209 1.157963602 1.261835508 1 11.11481186 -9.28008458 0.844939338 0.997090828 1.271865081 0.347514491 0.110962978 3.837060063 3.354268717 0.13875391 0.036540535 5.25E-10 9.28008458 0.274774253 RLSSSSATLLNS(ph)PDR ddPTM_A459_MK2206_30min_R2 4 RLSSSSATLLNSPDR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 RLSSSSATLLNS(1)PDR;RLSSSSATLLNS(1)PDR;RLSSSSATLLNS(1)PDR;RLSSSSATLLNS(1)PDR 169.6 2.99E-05 56469900 88293.7 115943 94129 120515 129614 121187 135859 103825 105606 117817 TRUE FALSE 95053.53356 110185.4392 97267.21388 110668.539 124524.7031 125798.8562 118020.5501 117395.284 114791.419 113972.6409 0.83400308 0.966770958 0.85342599 0.971009692 1.092584168 1.103763633 1.035516499 1.030030392 1.007183988 1 16.79832802 -6.000213627 4.620434351 1.048201771 0.894018429 0.716779406 0.044974997 0.103633763 5.847529063 0.01320807 0.018857409 1.00E-06 6.000213627 -0.154183342 RLT(ph)VNEAVK ddPTM_A459_MK2206_30min_R1 1 RLTVNEAVK 9 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 RLT(1)VNEAVK 107.09 0.015961 7629200 3355 3522.9 3214.9 3301.8 3433.9 3008.8 3492.6 3206.7 3118.2 2685.1 TRUE FALSE 3069.639632 3293.55857 2996.681545 3556.105208 3297.120492 3179.155656 3259.615027 3178.66416 3442.348049 3017.750459 1.017194653 1.091395267 0.993018338 1.178396046 1.092575591 1.053485269 1.080147305 1.053322401 1.140700033 1 11.5592578 RLT(ph)VNEAVK ddPTM_A459_MK2206_30min_R2 1 RLTVNEAVK 9 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 RLT(1)VNEAVK 109.16 0.014468 6499300 80785 83055 80040 91500 106170 85780 92518 75582 82802 89908 TRUE FALSE 86969.96171 78930.60947 82708.49365 84024.15731 102001.2323 89044.41801 80370.27547 85460.82691 90003.96829 86974.30932 0.999950013 0.90751637 0.950953153 0.96608019 1.172774272 1.023801381 0.924069143 0.982598512 1.034833953 1 16.4083017 -6.021635956 24.98960373 1.021979782 0.949983992 0.218235604 0.062312965 1238.087822 1429994.974 0.019689283 0.025674951 9.51E-07 6.021635956 -0.07199579 RLT(ph)VSSLQESGLK ddPTM_A459_MK2206_30min_R2 1 RLTVSSLQESGLK 13 1 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 RLT(0.89)VS(0.084)S(0.026)LQESGLK 103.67 0.01036 4557500 37860 49612 48076 54650 55264 46718 53350 35429 44729 48774 TRUE FALSE 40758.59071 47148.34022 49678.82985 50184.92018 53094.05768 48495.88623 46345.08092 40059.69195 48619.44757 47182.50837 0.863849594 0.99927583 1.052907774 1.063634002 1.12529112 1.027836118 0.982251315 0.849036928 1.030454913 1 15.5259645 -7.42135084 4.560771977 0.948389293 1.02852537 0.10986524 0.076582808 0.413473665 14.13502139 0.034918396 0.022697413 3.79E-08 7.42135084 0.080136078 RLTLEDLEDSWDR ddPTM_A459_MK2206_30min_R1 2 RLTLEDLEDSWDR 13 1 Q6P2Q9;I3L3Z8 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 0 ; 182.72 0.0001604 7384200 2468.8 2165.85 2552.1 2606.6 2911.2 2276.8 2387.2 2476.8 1859.73 1511.64 FALSE TRUE 2258.815596 2024.852771 2378.870563 2807.360784 2795.240739 2405.710448 2227.954244 2455.145599 2053.055589 1698.913375 1.329564902 1.191851686 1.40023064 1.652444924 1.645310926 1.416028906 1.311399554 1.445127005 1.20845219 1 10.73039658 -8.535952741 1.724486626 0.998060503 1.431225021 0.504294312 0.134153159 0.370525863 2.471905432 0.1460799 0.041879529 2.91E-09 8.535952741 0.433164519 RLTSECVS(ph)S(ph)NPY(ph)S(ph)K ddPTM_A459_MK2206_30min_R2 1 RLTSECVSSNPYSK 14 1 Q8IYA6;F8WBE0 Q8IYA6 CKAP2L Cytoskeleton-associated protein 2-like 4 RLT(0.188)S(0.2)ECVS(0.769)S(0.878)NPY(0.982)S(0.984)K 43.261 0.047651 6563500 1485.5 4139 3907.7 5289.4 4163.7 2022.3 2060.2 2170.3 4705.5 2182.2 TRUE FALSE 1599.231022 3933.463279 4037.980768 4857.2391 4000.212217 2099.260044 1789.693265 2453.965662 5114.775884 2110.994993 0.757572153 1.863321937 1.912832944 2.300924027 1.894941594 0.994441034 0.847796073 1.162468727 2.422921846 1 11.04370744 -6.749636718 24.99201105 1.268321726 1.792547674 0.145983111 0.550248907 414.6864852 878092.8565 0.18804766 0.186590252 1.78E-07 6.749636718 0.524225949 RMEDEGGFPVPQENGQPES(ph)PR ddPTM_A459_MK2206_30min_R1 4 RMEDEGGFPVPQENGQPESPR 21 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR 189.49 7.63E-17 54004400 9453.6 8115.6 8242 6385.8 9058.6 7408.6 8202.5 7206.8 6675.5 6182.1 TRUE FALSE 8649.521677 7587.272965 7682.556004 6877.635422 8697.77678 7828.06853 7655.326191 7143.791707 7369.442114 6947.98522 1.244896384 1.092010522 1.105724287 0.989874792 1.251841578 1.126667412 1.101805192 1.028181765 1.060658864 1 12.76237897 -7.643057008 3.062567281 1.031857723 1.129980251 0.298661073 0.071892256 0.366674751 6.834500062 0.039975556 0.020557545 2.27E-08 7.643057008 0.098122528 RMEDEGGFPVPQENGQPES(ph)PR ddPTM_A459_MK2206_30min_R2 7 RMEDEGGFPVPQENGQPESPR 21 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR 166.36 1.93E-10 84584800 110221 129348 121002.2 142128 125976.4 142107 126333 100987 113062.8 113319.6 TRUE FALSE 118659.6045 122924.7664 125036.353 130515.6878 121029.9336 147514.9815 109745.3253 114186.3476 122896.798 109621.9907 1.082443438 1.121351342 1.140613778 1.190597679 1.104066189 1.34566961 1.00112509 1.041637238 1.121096207 1 16.74217771 RMEDEGGFPVPQENGQPES(ph)PRR ddPTM_A459_MK2206_30min_R2 1 RMEDEGGFPVPQENGQPESPRR 22 2 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RMEDEGGFPVPQENGQPES(1)PRR 73.212 0.021528 0 6286.2 5354.5 6032.2 10202 6849.3 6537.3 7489.9 5268.6 6519.9 6755 TRUE FALSE 6767.476305 5088.603316 6233.310537 9368.463965 6580.362067 6786.081532 6506.467133 5957.22411 7086.989117 6534.584903 1.035639816 0.778718678 0.953895409 1.433673922 1.007005367 1.038487009 0.995697084 0.911645376 1.084535471 1 12.67387988 -5.534872654 24.99537158 1.067443701 0.896961057 0.179607785 0.143558487 339.4827165 707481.4541 0.039990229 0.069328542 2.92E-06 5.534872654 -0.170482644 RMEEEQHHWDDR ddPTM_A459_MK2206_30min_R1 2 RMEEEQHHWDDR 12 1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 0 ; 83.137 0.011549 10088300 1662.47 936.73 1727.01 1561.45 1944.62 1508.02 2338.9 1334.67 813.38 569.53 FALSE TRUE 1521.068197 875.7487067 1609.785373 1681.71315 1867.161668 1593.402789 2182.876249 1323.001121 897.9337617 640.0876761 2.376343512 1.368169923 2.514945113 2.62731687 2.917040489 2.489350832 3.410276951 2.066906098 1.402829324 1 9.322125722 -8.242905771 2.899188948 1.085124322 2.509786082 0.534737583 0.489864063 0.220522367 3.452364637 0.474227998 0.138379245 5.72E-09 8.242905771 1.42466176 RMEEEQHHWDDR ddPTM_A459_MK2206_30min_R2 2 RMEEEQHHWDDR 12 1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 0 ; 60.448 0.031325 8276400 8553.3 11063.2 5965.4 9114.3 10164.6 8839.2 7948.9 4856 6008.3 6742 FALSE TRUE 9208.147224 10513.81758 6164.283459 8369.632535 9765.486731 9175.58195 6905.199882 5490.695873 6530.891073 6522.009092 1.411857465 1.612051965 0.945151007 1.283290535 1.497312652 1.40686433 1.058753489 0.841871852 1.001361847 1 12.67110074 -7.394513502 4.020715135 0.942349576 1.354156036 0.559305994 0.168604875 0.189014769 5.213390564 0.079232035 0.051225133 4.03E-08 7.394513502 0.411806459 RMEELHNQEMQK ddPTM_A459_MK2206_30min_R2 1 RMEELHNQEMQK 12 1 P23246;P23246-2;H0Y9K7 P23246 SFPQ "Splicing factor, proline- and glutamine-rich" 0 96.745 0.0090089 3379900 18691 26373 23067 29896 29393 26632 28815 22540 25779 23697 FALSE TRUE 20121.99733 25063.35517 23836.04227 27453.40117 28238.88313 27645.49942 25031.55589 25486.05539 28021.21082 22923.76883 0.877778758 1.093334842 1.039795962 1.197595446 1.231860404 1.205975319 1.091947667 1.111774228 1.222364919 1 14.48455663 -4.032913478 1.046587352 1.153619544 2.42E-09 0.526801868 0.074039288 5.629068846 1.616670889 0.023092011 10.56832198 9.27E-05 4.032913478 -1.153619542 RMGESDDSILR ddPTM_A459_MK2206_30min_R1 2 RMGESDDSILR 11 1 Q8WVC2;P63220 Q8WVC2 RPS21 40S ribosomal protein S21 0 ; 201.46 2.53E-05 20158300 6103.4 5743.1 6042.1 5730.7 7259.9 5714.5 5562.5 6115.2 4208.2 2936.2 FALSE TRUE 5584.27378 5369.223146 5631.979086 6172.079507 6970.72281 6038.050052 5191.435774 6061.735451 4645.657449 3299.958623 1.692225394 1.627057718 1.706681728 1.870350575 2.112366731 1.829735079 1.573182081 1.836912563 1.407792636 1 11.68823222 -8.537093637 2.353707618 0.999713295 1.784737052 0.745964423 0.144304802 0.163925506 2.141472838 0.152787134 0.041774886 2.90E-09 8.537093637 0.785023757 RMHVMPEDDVFFIVDVK ddPTM_A459_MK2206_30min_R2 1 RMHVMPEDDVFFIVDVK 17 1 Q6UXM1-2;Q6UXM1 Q6UXM1-2 LRIG3 Leucine-rich repeats and immunoglobulin-like domains protein 3 0 55.401 0.042114 0 2664.3 3737.3 3491.9 4709.7 3820 2678.9 2998.8 2519.7 2430.8 3411.1 FALSE TRUE 2868.280856 3551.711117 3608.318203 4324.902444 3670.007606 2780.847417 2605.053958 2849.033441 2642.22659 3299.796086 0.869229729 1.076342605 1.093497328 1.310657486 1.112192242 0.84273311 0.789459073 0.863396818 0.800724203 1 11.68816116 -6.762098762 24.99626815 0.846362183 1.103680893 0.512263344 0.113118925 14.12215154 535336.4904 0.04021428 0.037588151 1.73E-07 6.762098762 0.257318711 RMNS(ph)TGGQTPR ddPTM_A459_MK2206_30min_R1 3 RMNSTGGQTPR 11 1 Q96ST2;Q96ST2-3;Q96ST2-2;A0A1B0GW95 Q96ST2 IWS1 Protein IWS1 homolog 1 RMNS(0.807)T(0.19)GGQT(0.003)PR;RMNS(0.441)T(0.441)GGQT(0.118)PR;RMNS(0.5)T(0.5)GGQT(0.001)PR 142.1 0.0017043 9000200 5367 4333.08 4703.15 3876.65 4096.5 2935.59 3644.29 5511.8 1391.32 1620.85 TRUE FALSE 4910.508467 4050.995704 4383.913282 4175.230255 3933.327731 3101.800569 3401.186063 5463.610914 1535.952693 1821.653135 2.695633089 2.223801901 2.406557647 2.292000697 2.15920784 1.702739402 1.867087646 2.999259743 0.843164192 1 10.83103256 -9.845198557 0.157078194 2.99E-10 2.832275735 0.448918014 0.48390237 17.45593729 0.79466449 11.12251825 3.173959076 1.43E-10 9.845198557 2.832275735 RMNS(ph)TGGQTPR ddPTM_A459_MK2206_30min_R2 2 RMNSTGGQTPR 11 1 Q96ST2;Q96ST2-3;Q96ST2-2;A0A1B0GW95 Q96ST2 IWS1 Protein IWS1 homolog 1 RMNS(0.766)T(0.234)GGQTPR;RMNS(0.805)T(0.194)GGQT(0.001)PR 115.12 0.011261 5455600 4215.1 10765.2 8235 7383.7 9839.8 11223.7 7010.4 4330.68 8579.9 6910.9 TRUE FALSE 4537.811297 10230.61582 8509.55079 6780.428091 9453.440011 11650.82577 6089.926059 4896.714745 9326.164193 6685.397899 0.67876458 1.530292733 1.272856293 1.01421459 1.414042986 1.742727351 0.910929484 0.73244926 1.395005104 1 12.70679771 RMS(ph)ADMSEIEAR ddPTM_A459_MK2206_30min_R1 5 RMSADMSEIEAR 12 1 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 RMS(0.996)ADMS(0.004)EIEAR;RMS(1)ADMSEIEAR;RMS(1)ADMSEIEAR;RMS(1)ADMSEIEAR;RMS(1)ADMSEIEAR 222.55 3.59E-08 78908000 10687 10854.95 12036.24 10850.92 14460.45 12498.61 12312.5 11424 10008.26 9269.3 TRUE FALSE 9778.01453 10148.29078 11219.25356 11686.65974 13884.45966 13206.2705 11491.15559 11324.12117 11048.65444 10417.65086 0.938600713 0.974143875 1.076946589 1.121813343 1.332782202 1.267682193 1.103046718 1.087012928 1.060570621 1 13.34674237 -5.398246767 2.097309499 1.15420728 0.944213601 0.376077785 0.092384553 0.363161791 3.02297858 0.02877426 0.086672884 4.00E-06 5.398246767 -0.209993679 RMS(ph)ADMSEIEAR ddPTM_A459_MK2206_30min_R2 4 RMSADMSEIEAR 12 1 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 RMS(0.999)ADMS(0.001)EIEAR;RMS(1)ADMSEIEAR;RMS(0.999)ADMS(0.001)EIEAR;RMS(0.995)ADMS(0.005)EIEAR 123.63 0.0016689 42046000 35427.3 44976.3 45406.1 45927.5 55804.9 54409.4 53295 34824.4 43171.2 46868 TRUE FALSE 38139.64133 42742.84234 46919.91671 42175.07634 53613.71923 56479.98784 46297.30248 39376.06865 46926.15294 45338.701 0.841216014 0.942745191 1.034875629 0.930222424 1.182515556 1.245734584 1.021143118 0.868486917 1.035013177 1 15.46845544 -4.801276874 1.198683841 1.04903047 0.748527024 0.277461937 0.102779733 2.218367498 2.765346883 0.035257269 0.830662007 1.58E-05 4.801276874 -0.300503447 RMS(ph)GEPIQTVESIR ddPTM_A459_MK2206_30min_R1 2 RMSGEPIQTVESIR 14 1 Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 RMS(1)GEPIQTVESIR;RMS(1)GEPIQTVESIR 90.872 0.0090849 9029900 1809.15 1738.74 1827.97 1328.79 1967.06 2104.03 1841.77 1798.66 1630.93 1917.8 TRUE FALSE 1655.272292 1625.54771 1703.892489 1431.133636 1888.707835 2223.15836 1718.908884 1782.934505 1800.47101 2155.391543 0.76796826 0.754177456 0.790525738 0.663978497 0.87627134 1.031440607 0.797492636 0.827197504 0.835333615 1 11.07373425 -6.365763824 7.723471469 0.88883162 0.748477963 0.486883695 0.075548554 0.273807997 18.04449652 0.024037823 0.027256213 4.31E-07 6.365763824 -0.140353657 RMS(ph)GEPIQTVESIR ddPTM_A459_MK2206_30min_R2 1 RMSGEPIQTVESIR 14 1 Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 RMS(1)GEPIQTVESIR 86.222 0.012118 4201300 5049.3 6610.6 7557.5 9668 5674.8 5594.9 7272.1 4667.2 7042.8 4838.7 TRUE FALSE 5435.87829 6282.327217 7809.463278 8878.093474 5451.978838 5807.81784 6317.264535 5277.219065 7655.370014 4680.813615 1.161310562 1.342144279 1.668398684 1.89669878 1.164750252 1.240771011 1.349608221 1.127414911 1.635478496 1 12.1925436 RMS(ph)KAT(ph)EVMMQY(ph)VENLK ddPTM_A459_MK2206_30min_R2 1 RMSKATEVMMQYVENLK 17 2 E9PJ61;H0YI08;Q9Y6F6-6;Q9Y6F6-8;Q9Y6F6-3;Q9Y6F6-5;Q9Y6F6-1;Q9Y6F6-2;Q9Y6F6-4;Q9Y6F6;Q9Y6F6-7 E9PJ61 MRVI1 Protein MRVI1 3 RMS(1)KAT(1)EVMMQY(1)VENLK 41.615 0.048199 0 3359.6 2528.7 4210.8 2697.4 1944.1 2156.8 3144 2741.9 1253.4 3348.6 TRUE FALSE 3616.813559 2403.128435 4351.18597 2477.013791 1867.764866 2238.878535 2731.189023 3100.275744 1362.418466 3239.335456 1.116529488 0.741858467 1.343234138 0.764667267 0.576588899 0.691153653 0.843132507 0.957071531 0.420585791 1 11.66148216 -5.957628856 24.99704397 0.740827562 1.037886059 0.319324194 0.210582361 172.5811584 101813.9381 0.057018786 0.084572466 1.10E-06 5.957628856 0.297058497 RMS(ph)PKPELTEEQK ddPTM_A459_MK2206_30min_R2 1 RMSPKPELTEEQK 13 2 P41208 P41208 CETN2 Centrin-2 1 RMS(1)PKPELTEEQK 72.496 0.021402 19995000 142800 88977 102260 102050 73763 54243 122220 109060 47195 102310 TRUE FALSE 153732.8778 84558.53156 105669.2974 93712.18856 70866.69399 56307.25537 106172.3672 123314.5165 51299.93579 98971.63308 1.553302426 0.854371388 1.067672565 0.946859071 0.716030359 0.568923171 1.072755535 1.245958186 0.518329689 1 16.59472746 -4.759374792 24.95516264 0.893465555 1.553303287 0.453440494 0.219091492 50.99777778 616265.3226 0.055225429 0.352254025 1.74E-05 4.759374792 0.659837733 RMS(ph)VGDR ddPTM_A459_MK2206_30min_R2 1 RMSVGDR 7 1 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 RMS(1)VGDR 72.325 0.03166 3691700 7972.9 8937.4 10320 11513 8592.4 9315.4 7315.7 8519.2 8422.6 7368.5 TRUE FALSE 8583.311354 8493.581712 10664.06365 10572.35107 8255.019203 9669.904075 6355.139802 9632.688691 9155.182523 7128.066448 1.204157034 1.191568818 1.496066812 1.483200409 1.158100764 1.356595669 0.891565735 1.351374705 1.284385126 1 12.79929507 -6.7194961 2.042330597 1.168867399 1.335002561 0.176779759 0.167792136 0.629330075 5.400744542 0.067559165 0.063890765 1.91E-07 6.7194961 0.166135162 RNALFPEVFS(ph)PTPDENSDQNSR ddPTM_A459_MK2206_30min_R1 4 RNALFPEVFSPTPDENSDQNSR 22 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 RNALFPEVFS(0.982)PT(0.018)PDENSDQNSR;RNALFPEVFS(0.996)PT(0.004)PDENSDQNSR;RNALFPEVFS(0.997)PT(0.003)PDENSDQNSR;RNALFPEVFS(0.994)PT(0.006)PDENSDQNSR 159.36 2.15E-09 70013000 3913.83 4180.62 4554.75 4898.35 4989.71 3850.03 4256.12 4820.16 3250.42 2609.29 TRUE FALSE 3580.938206 3908.460878 4245.58626 5275.621766 4790.959285 4068.015371 3972.202001 4778.017849 3588.312791 2932.548544 1.221101084 1.332786421 1.447746285 1.798988725 1.633718662 1.387194554 1.354522164 1.629305629 1.22361582 1 11.51793927 -8.508758999 4.69319556 1.000641438 1.477924357 0.473855775 0.161944891 0.147526854 10.26105638 0.169343487 0.044133598 3.10E-09 8.508758999 0.477282918 RNALFPEVFS(ph)PTPDENSDQNSR ddPTM_A459_MK2206_30min_R2 4 RNALFPEVFSPTPDENSDQNSR 22 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 RNALFPEVFS(0.864)PT(0.134)PDENS(0.001)DQNSR;RNALFPEVFS(0.986)PT(0.013)PDENS(0.001)DQNSR;RNALFPEVFS(0.965)PT(0.034)PDENSDQNSR;RNALFPEVFS(0.996)PT(0.004)PDENSDQNSR 95.209 0.00011253 18521600 43951.2 73720 66406 73153 72635 72419 71290 56470 62827 63445 TRUE FALSE 47316.13766 70059.172 68619.9429 67176.1659 69782.98494 75174.95579 61929.53737 63850.82289 68291.57889 61374.79485 0.77093761 1.141497453 1.118047613 1.094523673 1.136997445 1.224850624 1.009038605 1.040342751 1.112697469 1 15.90535868 -4.757251201 24.99984154 1.101805874 0.770937126 0.699696592 0.064138343 70.00480736 417813.6481 0.01621422 0.122299195 1.75E-05 4.757251201 -0.330868748 RNDDIS(ph)ELEDLSELEDLKDAK ddPTM_A459_MK2206_30min_R1 1 RNDDISELEDLSELEDLKDAK 21 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 RNDDIS(1)ELEDLSELEDLKDAK 76.909 0.0030722 3351400 596.71 647.98 681.56 798.41 478.78 465.61 449.83 593.48 371.03 608.41 TRUE FALSE 545.9566811 605.7963842 635.2976061 859.9036765 459.7091788 491.9724358 419.8226615 588.2912669 409.5998962 683.7844241 0.798433924 0.885946452 0.929090491 1.257565464 0.672301332 0.719484707 0.613969325 0.860346107 0.59901905 1 9.41739775 RNDDISELEDLS(ph)ELEDLKDAK ddPTM_A459_MK2206_30min_R1 2 RNDDISELEDLSELEDLKDAK 21 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK 56.819 0.011372 6175700 1735.92 2035.37 2051.41 1907.3 1187.4 1107.94 1770.21 1723.15 1739.72 1617.06 TRUE FALSE 1588.270888 1902.867043 1912.166005 2054.200576 1140.103344 1170.670605 1652.122521 1708.084681 1920.57012 1817.393601 0.873927853 1.047030782 1.052147429 1.130300324 0.627328798 0.644148084 0.909061482 0.93985402 1.056771697 1 10.82765519 -3.278969284 9.498260874 0.921993401 0.942659028 0 0.163413033 0 0 0.041029116 0 0.000526054 3.278969284 0.020665627 RNDFQLIGIQDGYLSLLQDSGEVR ddPTM_A459_MK2206_30min_R1 2 RNDFQLIGIQDGYLSLLQDSGEVR 24 1 P63241;P63241-2;I3L397;I3L504 P63241 EIF5A Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A 0 ; 207.11 1.63E-31 18904100 2754.6 3213.4 3324.6 3126.2 3397.8 2973.8 3244.3 2527.26 2443.7 2338.43 FALSE TRUE 2520.306805 3004.207076 3098.935415 3366.980466 3262.458431 3142.173986 3027.878667 2505.164432 2697.73136 2628.132363 0.958972554 1.143095804 1.17913978 1.281130476 1.241360016 1.195591984 1.152102805 0.953210907 1.026482303 1 11.35982222 -7.701853792 6.187402141 0.99270262 1.174035303 0.478113841 0.081695751 0.174098559 13.13455973 0.042415798 0.023843052 1.99E-08 7.701853792 0.181332683 RNES(ph)PGAPPAGK ddPTM_A459_MK2206_30min_R1 1 RNESPGAPPAGK 12 1 P49796-1;P49796-4;P49796-6;P49796;C9J582;H7BXY1;A0A087WUY2;P49796-2;P49796-7;P49796-8;P49796-9 P49796-1 RGS3 Regulator of G-protein signaling 3 1 RNES(1)PGAPPAGK 67.879 0.03643 2450100 3634.3 3434 3279.7 2955 3268.6 3249.6 3679.9 3484.5 2751.7 2680.8 TRUE FALSE 3325.183701 3210.445976 3057.083102 3182.594612 3138.404741 3433.589544 3434.420585 3454.035384 3037.749062 3012.917743 1.103642377 1.065560447 1.014658667 1.056316462 1.041649659 1.13962273 1.139898556 1.14640879 1.008241619 1 11.55694557 -6.736644603 24.98325981 1.099301427 1.054556571 0.051836335 0.05285616 459.4655047 462956.9618 0.017295372 0.01728813 1.83E-07 6.736644603 -0.044744856 RNGAAGPHS(ph)PDPLLDEQAFGDLTDLPVVPK ddPTM_A459_MK2206_30min_R2 1 RNGAAGPHSPDPLLDEQAFGDLTDLPVVPK 30 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 RNGAAGPHS(0.985)PDPLLDEQAFGDLT(0.015)DLPVVPK 47.23 0.021615 13988000 71972 82980 62698 67680 59303 43489 48010 33072 34319 38124 TRUE FALSE 77482.23166 78859.33386 64788.32003 62150.3275 56974.46625 45144.00437 41706.22933 37394.62395 37304.00459 36880.017 2.100927222 2.138267286 1.75673238 1.685203331 1.544860086 1.224077645 1.13086253 1.013953544 1.011496404 1 15.1705517 -6.158202176 0.58469666 0.953186487 2.264453446 0.977688402 0.063240476 0.143862826 0.097654405 0.045541712 0.104576457 6.95E-07 6.158202176 1.311266958 up RNGS(ph)PTPAGSLGGGAVATAGGPGSR ddPTM_A459_MK2206_30min_R1 1 RNGSPTPAGSLGGGAVATAGGPGSR 25 1 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 RNGS(0.973)PT(0.027)PAGSLGGGAVATAGGPGSR 62.032 0.002533 5422500 760.24 871.68 721.26 1065.5 914.67 687.18 848.24 944.54 839.95 481.36 TRUE FALSE 695.5775958 814.9334736 672.3028807 1147.564995 878.2367571 726.0875378 791.6554573 936.2819864 927.2658083 540.9945109 1.285738731 1.506361815 1.24271664 2.121213749 1.623374617 1.342134759 1.463333622 1.730668182 1.714002249 1 9.079470146 RNHLFT(ph)MMK ddPTM_A459_MK2206_30min_R1 1 RNHLFTMMK 9 1 O43149-3 O43149-3 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 RNHLFT(1)MMK 93.442 0.036747 37568000 2131 1723.5 2172.4 1986.5 2486.4 1618.8 2355.4 1840.2 1433.9 1578.3 TRUE FALSE 1949.74726 1611.299837 2024.943541 2139.500574 2387.361423 1710.455057 2198.275564 1824.111325 1582.959036 1773.83172 1.099172621 0.908372434 1.141564624 1.206146305 1.345878189 0.964271322 1.239280784 1.028345195 0.89239527 1 10.79265343 -7.995608254 23.66855794 0.950921788 1.126711376 0.272137072 0.12160903 81.84256446 441077.4721 0.069362221 0.033071359 1.01E-08 7.995608254 0.175789588 RNIS(ph)PESSDNSH ddPTM_A459_MK2206_30min_R1 1 RNISPESSDNSH 12 1 A0A3B3ISF0;Q659C4-2;Q659C4;Q659C4-8 A0A3B3ISF0 LARP1B La-related protein 1B 1 RNIS(0.795)PES(0.205)SDNSH 193.51 0.00028026 1120000 744.56 589.59 707.36 542.17 924.63 898.24 743.32 707.77 580.82 404.73 TRUE FALSE 681.2312622 551.2075838 659.346374 583.9280273 887.8000292 949.0975726 693.7344791 701.5820415 641.1983175 454.871008 1.497636144 1.21178878 1.449523848 1.283722236 1.951762178 2.086520257 1.525123534 1.542375815 1.409626699 1 8.829313674 -6.214176017 24.9615955 1.635012762 1.356380326 0.113940082 0.288738907 740.0011869 390822.5683 0.086468091 0.111629586 6.11E-07 6.214176017 -0.278632436 RNLEVLR ddPTM_A459_MK2206_30min_R1 4 RNLEVLR 7 1 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 0 ;;; 163.67 0.00039315 67358200 18397.5 15953.1 18484 16465.8 20302.7 18670.3 17816.9 17069.6 14134.6 13628.9 FALSE TRUE 16832.69602 14914.55029 17229.35758 17733.99877 19494.00047 19727.39625 16628.36711 16920.36229 15603.94225 15317.35102 1.098929964 0.973702977 1.124826189 1.157771911 1.272674396 1.287911743 1.085590262 1.104653295 1.018710234 1 13.9028792 -8.116634586 1.839117067 1.001176106 1.147493103 0.284729239 0.084706285 0.543518704 3.274000165 0.087887272 0.027397749 7.64E-09 8.116634586 0.146316997 RNLEVLR ddPTM_A459_MK2206_30min_R2 6 RNLEVLR 7 1 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 0 ;;;;; 171.38 2.61E-05 83620200 130979 165630 150496 180702 173918 192705 182440 140209 162960 161273 FALSE TRUE 141006.8529 157405.055 155513.4615 165938.0686 167089.1055 200038.5238 158485.4089 158534.7977 177133.9662 156010.6752 0.903828233 1.008937721 0.996812951 1.063632782 1.071010719 1.282210487 1.015862592 1.016179165 1.135396446 1 17.25128523 -5.214414999 1.082020978 1.091130347 0.899079543 0.32770174 0.078871119 1.167463174 1.804179498 0.027344539 0.21784043 6.10E-06 5.214414999 -0.192050804 RNPNPSSS(ph)SIFGR ddPTM_A459_MK2206_30min_R1 1 RNPNPSSSSIFGR 13 1 Q9ULJ8-3 Q9ULJ8-3 PPP1R9A Neurabin-1 1 RNPNPS(0.104)S(0.093)S(0.736)S(0.067)IFGR 90.498 0.010804 13417000 4804.9 4541.9 4952.5 4172.5 4973.8 4435.6 5194 4538 4632.2 4036.4 TRUE FALSE 4396.218023 4246.221484 4616.338098 4493.866673 4775.683014 4686.739839 4847.517737 4498.324744 5113.733766 4536.459705 0.969085655 0.936020986 1.017608091 0.990610953 1.05273348 1.033127184 1.068568455 0.991593674 1.127252108 1 12.14735113 -5.669718113 1.035313969 1.046935026 0.947110488 0.435804718 0.038891429 0.579815858 1.131786039 0.013646391 0.04649247 2.14E-06 5.669718113 -0.099824538 RNQEIQQGEDAFPPS(ph)SPLFAEPYK ddPTM_A459_MK2206_30min_R1 1 RNQEIQQGEDAFPPSSPLFAEPYK 24 1 Q9UHB7;Q9UHB7-2;Q9UHB7-3;C9JCE0 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 RNQEIQQGEDAFPPS(0.5)S(0.5)PLFAEPYK 77.287 0.0037577 0 804.33 973.72 842.92 1237.1 1030.9 879.04 984.31 880.02 934.39 731.76 TRUE FALSE 735.9175098 910.330651 785.7049389 1332.381656 989.83707 928.8104851 918.6484759 872.3260779 1031.523184 822.4159533 0.894823972 1.106898094 0.955361987 1.620082455 1.203572312 1.129368273 1.117011984 1.060687204 1.254259697 1 9.68372444 RNQEIQQGEDAFPPSS(ph)PLFAEPYK ddPTM_A459_MK2206_30min_R1 1 RNQEIQQGEDAFPPSSPLFAEPYK 24 1 Q9UHB7;Q9UHB7-2;Q9UHB7-3;C9JCE0 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 RNQEIQQGEDAFPPS(0.362)S(0.638)PLFAEPYK 100.12 3.02E-06 4900400 986.99 1166.7 1005.5 1078.1 1142 955.57 821.19 670.87 841.41 580.27 TRUE FALSE 903.0413176 1090.747618 937.2494615 1161.135449 1096.511722 1009.673548 766.4099134 665.0046543 928.8775805 652.1582284 1.384696655 1.672519905 1.437150404 1.780450508 1.68135841 1.54820334 1.17519013 1.019698327 1.424313211 1 9.349078227 -7.244619023 4.466427135 1.152415719 1.5983823 0.656293639 0.152426983 0.122585788 6.354174328 0.060647886 0.043829022 5.69E-08 7.244619023 0.445966581 RNQEIQQGEDAFPPSS(ph)PLFAEPYK ddPTM_A459_MK2206_30min_R2 1 RNQEIQQGEDAFPPSSPLFAEPYK 24 1 Q9UHB7;Q9UHB7-2;Q9UHB7-3;C9JCE0 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 RNQEIQQGEDAFPPS(0.333)S(0.651)PLFAEPY(0.016)K 46.971 0.031131 4524100 22957 17253 15238 12236 12679 9761.1 14897 13029 10144 19971 TRUE FALSE 24714.60557 16396.24111 15746.02731 11236.27966 12181.15875 10132.5655 12941.00601 14731.93504 11026.30678 19319.34791 1.279267069 0.848695369 0.815039275 0.581607605 0.630516041 0.524477614 0.669846936 0.762548255 0.570739077 1 14.23775878 -4.395824518 1.198577695 0.663307268 2.14682225 0.643752201 0.131508797 1.933540251 1.277722592 0.037412026 4.466040689 4.02E-05 4.395824518 1.483514982 RNQS(ph)FCPTVNLDK ddPTM_A459_MK2206_30min_R2 1 RNQSFCPTVNLDK 13 1 P46776;E9PLL6;E9PJD9 P46776 RPL27A 60S ribosomal protein L27a 1 RNQS(1)FCPTVNLDK 73.464 0.026578 5170000 16006 20122 16880 23815 20855 18446 26251 30681 38695 22649 TRUE FALSE 17231.43167 19122.77074 17442.77078 21869.23832 20036.12791 19147.97546 22804.21217 34691.11204 42060.62116 21909.96498 0.786465505 0.87278874 0.796111303 0.998141181 0.914475579 0.873939117 1.040814633 1.583348584 1.919702801 1 14.41929956 -7.675642051 3.827149291 1.567888944 0.882963779 0.616073344 0.21929826 0.130581161 3.655576973 0.108978677 0.05757024 2.11E-08 7.675642051 -0.684925165 RNS(ph)CNVGGGGGGFK ddPTM_A459_MK2206_30min_R2 1 RNSCNVGGGGGGFK 14 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 RNS(1)CNVGGGGGGFK 68.044 0.033124 13275000 42398 36622 32599 32252 26095 24960 32436 29787 26368 39993 TRUE FALSE 45644.02348 34803.40473 33685.83439 29616.90843 25070.37918 25909.87029 28177.11424 33680.26317 28661.44098 38688.03169 1.179796994 0.89959099 0.87070427 0.765531539 0.64801382 0.669712807 0.728316045 0.870560266 0.74083482 1 15.23959971 -4.434658524 1.130419532 0.761574776 1.695447247 0.593947112 0.098744084 2.133661296 1.352967874 0.030313199 2.856732302 3.68E-05 4.434658524 0.933872472 RNS(ph)EGSELSCTEGSLTSSLDSR ddPTM_A459_MK2206_30min_R1 4 RNSEGSELSCTEGSLTSSLDSR 22 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 RNS(0.94)EGS(0.06)ELSCTEGSLTSSLDSR;RNS(0.999)EGS(0.001)ELSCTEGSLTSSLDSR;RNS(0.89)EGS(0.11)ELSCTEGSLTSSLDSR;RNS(0.783)EGS(0.217)ELSCTEGSLTSSLDSR 175.52 2.79E-16 66210000 3054.79 2954.14 3022.24 3032.43 3481.12 2751.81 3023.57 2381.72 2422.97 2404 TRUE FALSE 2794.964069 2761.824949 2817.098769 3265.988284 3342.459619 2907.615104 2821.873162 2360.896873 2674.846402 2701.825669 1.034472394 1.02220694 1.042664892 1.208807926 1.237111505 1.076166807 1.044431991 0.873815398 0.990014431 1 11.39971887 -7.508880013 3.545737314 0.948754212 1.106706426 0.439630706 0.074506984 0.233301518 6.254513211 0.040576644 0.023843071 3.10E-08 7.508880013 0.157952214 RNS(ph)EGSELSCTEGSLTSSLDSR ddPTM_A459_MK2206_30min_R2 4 RNSEGSELSCTEGSLTSSLDSR 22 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 RNS(0.79)EGS(0.21)ELSCTEGSLTSSLDSR;RNS(1)EGSELSCTEGSLTSSLDSR;RNS(0.998)EGS(0.002)ELSCTEGSLTSSLDSR;RNS(0.996)EGS(0.004)ELSCTEGSLTSSLDSR 194.43 2.56E-22 66779500 25030.9 33293.8 30442 37795 33388.5 33925.6 29309.1 23318.5 24384.4 25787.7 TRUE FALSE 26947.28495 31640.47831 31456.92109 34707.0276 32077.49973 35216.66248 25460.77996 26366.30801 26505.31104 24946.24946 1.080213881 1.268346104 1.260987995 1.39127237 1.285864626 1.411701688 1.020625566 1.056924732 1.062496833 1 14.60653531 -7.277450914 24.96468172 1.039755484 1.286437776 0.669127051 0.085406898 514.5057851 802198.1668 0.036670846 0.024816466 5.28E-08 7.277450914 0.246682292 RNS(ph)EPPPAAALPLGR ddPTM_A459_MK2206_30min_R2 2 RNSEPPPAAALPLGR 15 1 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 RNS(1)EPPPAAALPLGR;RNS(1)EPPPAAALPLGR 86.222 0.010222 5997300 16638.6 16068.5 14121.2 18323.4 16674.3 16602 16048.5 15279.3 15798.2 15587 TRUE FALSE 17912.46401 15270.56166 14591.99376 16826.31961 16019.5832 17233.80074 13941.31267 17276.35697 17172.29888 15078.39747 1.187955421 1.012744338 0.967741684 1.115922275 1.06241948 1.142946443 0.924588485 1.145768774 1.138867636 1 13.88019549 RNS(ph)FSENEK ddPTM_A459_MK2206_30min_R1 3 RNSFSENEK 9 1 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 RNS(0.999)FS(0.001)ENEK;RNS(0.992)FS(0.008)ENEK;RNS(0.999)FS(0.001)ENEK 145.23 0.0033097 181023000 16296 18723.4 16926.6 16038.8 15251.6 14615.5 19532.4 20891.8 6429.8 16551.5 TRUE FALSE 14909.93963 17504.50326 15777.66955 17274.11116 14644.09648 15443.01698 18229.42923 20709.1452 7098.200719 18602.02478 0.801522404 0.940999889 0.848169473 0.928614565 0.787231318 0.830179358 0.979970162 1.113273713 0.381582156 1 14.18317204 -8.244178679 24.96105093 0.690790913 0.900168232 0.208194474 0.16600216 1042.960745 1508252.697 0.10544449 0.039640432 5.70E-09 8.244178679 0.209377318 RNS(ph)FSENEK ddPTM_A459_MK2206_30min_R2 2 RNSFSENEK 9 1 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 RNS(0.999)FS(0.001)ENEK;RNS(0.981)FS(0.019)ENEK 95.401 0.026283 62648000 51603 51900 53755 55110 58957 45311 64309 64341 53104 65159 TRUE FALSE 55553.76536 49322.72147 55547.16487 50607.33671 56642.05194 47035.34186 55865.15105 72750.58962 57722.88993 63032.86717 0.881346 0.782492114 0.881241285 0.8028722 0.898611383 0.746203433 0.886286053 1.154169132 0.915758596 1 15.94381667 -7.565405575 9.740044649 1.025511002 0.832328773 0.597877125 0.070149727 0.238050198 52.04763304 0.029952286 0.01729039 2.72E-08 7.565405575 -0.193182229 RNS(ph)FTPLSSSNTIR ddPTM_A459_MK2206_30min_R1 2 RNSFTPLSSSNTIR 14 1 O60825 O60825 PFKFB2 "6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase" 1 RNS(0.972)FT(0.028)PLSSSNTIR;RNS(0.962)FT(0.038)PLSSSNTIR 76.586 0.02152 31061000 1225.92 919.35 828.34 799.69 1306.29 1700.89 2707.3 3118.4 3111.9 3002.7 TRUE FALSE 1121.649066 859.5001479 772.1145887 861.2822624 1254.257703 1797.192922 2526.700957 3091.136158 3435.393141 3374.697145 0.332370289 0.254689565 0.228795224 0.255217646 0.371665263 0.532549395 0.748719321 0.91597439 1.017985613 1 11.72054232 -7.253868969 1.085603804 1.018121404 0.257691614 0.989700903 0.031266271 0.048583017 0.111553153 0.023364603 0.013358194 5.57E-08 7.253868969 -0.760429789 down RNS(ph)FTPLSSSNTIR ddPTM_A459_MK2206_30min_R2 4 RNSFTPLSSSNTIR 14 1 O60825 O60825 PFKFB2 "6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase" 1 RNS(0.998)FT(0.002)PLSSSNTIR;RNS(0.998)FT(0.002)PLSSSNTIR;RNS(0.994)FT(0.006)PLSSSNTIR;RNS(0.999)FT(0.001)PLSSSNTIR 90.872 0.0090849 109389000 33161.7 44631.1 34067.1 40101.4 50133 64764 73789 68326 81200 98009 TRUE FALSE 35700.58525 42414.78447 35202.88011 36824.98734 48164.52652 67228.6394 64100.41566 77256.4428 88262.62922 94810.97436 0.376544862 0.44736155 0.371295415 0.388404271 0.508005817 0.709080777 0.676086456 0.81484705 0.930932625 1 16.53276644 -7.306786418 0.640333057 0.996477057 0.367661697 0.956693233 0.046866222 0.151254139 0.124513713 0.044582536 0.030413531 4.93E-08 7.306786418 -0.628815359 down RNS(ph)IEVAGLSHGLEGLR ddPTM_A459_MK2206_30min_R1 2 RNSIEVAGLSHGLEGLR 17 1 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 RNS(1)IEVAGLSHGLEGLR;RNS(1)IEVAGLSHGLEGLR 145.73 0.00023697 18568700 3676.14 3640.45 4016.3 3538.1 3873.2 3517.2 3862.55 3620.34 3209.93 2736.67 TRUE FALSE 3363.464989 3403.456043 3743.684746 3810.605075 3718.922242 3716.340824 3604.886337 3588.687749 3543.61371 3075.70934 1.093557491 1.106559712 1.217177676 1.238935365 1.209126686 1.208287394 1.172050392 1.166783773 1.15212893 1 11.58670346 -9.067140505 1.206846604 0.999877905 1.18086911 0.586949225 0.044174648 1.927196848 3.535242459 0.047829371 0.014406598 8.57E-10 9.067140505 0.180991204 RNS(ph)IEVAGLSHGLEGLR ddPTM_A459_MK2206_30min_R2 3 RNSIEVAGLSHGLEGLR 17 1 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 RNS(1)IEVAGLSHGLEGLR;RNS(1)IEVAGLSHGLEGLR;RNS(1)IEVAGLSHGLEGLR 115.87 0.00084415 10577700 25354.2 34236.9 28733.2 39564.4 25645.2 34440.6 35136.9 21754.1 27792.2 29378.1 TRUE FALSE 27295.33705 32536.74533 29691.15055 36331.86196 24638.24059 35751.26117 30523.38282 24597.43556 30209.51532 28419.495 0.960444126 1.144874155 1.044745888 1.278413355 0.866948571 1.257983689 1.07402974 0.86551276 1.062985648 1 14.7945933 -7.550110556 23.72252669 0.972503544 1.096967704 0.148380229 0.124823235 212.3873471 185013.4794 0.054864128 0.031677072 2.82E-08 7.550110556 0.124464161 RNS(ph)LEGYSR ddPTM_A459_MK2206_30min_R1 1 RNSLEGYSR 9 1 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 RNS(1)LEGYSR 134.3 0.0014964 10397000 1632.5 1710.8 1663.2 1662.9 1744.3 1321.1 1938.9 1596.7 1235.9 1469 TRUE FALSE 1493.647302 1599.426609 1550.306618 1790.976846 1674.820837 1395.89954 1809.559519 1582.74022 1364.376228 1650.99081 0.904697526 0.968767724 0.939015898 1.084789107 1.014433773 0.845492011 1.096044574 0.95866083 0.826398439 1 10.68911637 -9.782672644 11.38402357 0.999999503 0.965355987 0.016114343 0.084769507 0 0 0.081286184 0.019714795 1.65E-10 9.782672644 -0.034643516 RNS(ph)LEGYSR ddPTM_A459_MK2206_30min_R2 3 RNSLEGYSR 9 1 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 RNS(0.997)LEGYS(0.003)R;RNS(1)LEGYSR;RNS(1)LEGYSR 141.71 0.0011207 21773500 64639 76930 75985 84236 82335 93770 96946 70553 75166 77640 TRUE FALSE 69587.81154 73109.76807 78518.30198 77353.64934 79102.1142 97338.48306 84216.87375 79774.51934 81703.80281 75106.61316 0.92652043 0.973413192 1.045424613 1.029917954 1.053197726 1.296004159 1.121297715 1.062150402 1.087837667 1 16.19665232 -5.506405501 1.074391663 1.113669046 0.925328988 0.381702668 0.07472547 0.754536351 1.456444435 0.028053417 0.123450528 3.12E-06 5.506405501 -0.188340058 RNS(ph)LGGDVLFVGK ddPTM_A459_MK2206_30min_R1 2 RNSLGGDVLFVGK 13 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 RNS(1)LGGDVLFVGK;RNS(1)LGGDVLFVGK 143.88 0.00072283 9834200 14794.3 15195.9 14848.2 13819.9 14647.1 12849.9 14290.7 13223.3 12193.8 10536.9 TRUE FALSE 13535.9671 14206.64415 13840.34555 14884.31109 14063.67499 13577.45023 13337.39348 13107.69008 13461.38915 11842.29072 1.143019321 1.199653385 1.168721988 1.256877697 1.187580623 1.146522286 1.126251144 1.106854273 1.136721726 1 13.53166056 -8.615278422 0.451123013 0.994572852 1.196352716 0.730413149 0.033139156 0.696206313 0.344128853 0.048545535 0.022814544 2.43E-09 8.615278422 0.201779864 RNS(ph)LGGDVLFVGK ddPTM_A459_MK2206_30min_R2 1 RNSLGGDVLFVGK 13 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 RNS(1)LGGDVLFVGK 94.007 0.0083965 8582100 53667 67001 60798 73840 73970 69415 76943 63031 64799 72185 TRUE FALSE 57775.78678 63673.82777 62824.97498 67807.0358 71065.56613 72056.63647 66840.29167 71269.36812 70435.09989 69829.60936 0.827382357 0.911845682 0.899689624 0.971035588 1.017699609 1.031892304 0.957191259 1.02061817 1.008670971 1 16.09155128 -5.530890297 1.151574812 1.007355511 0.844133434 0.834669583 0.025588121 0.244889876 0.56637486 0.008900158 0.03539543 2.95E-06 5.530890297 -0.163222077 RNS(ph)LILK ddPTM_A459_MK2206_30min_R2 1 RNSLILK 7 1 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 RNS(1)LILK 79.986 0.02348 3892900 45965 34411 35974 35754 31174 31447 41661 32628 30861 40250 TRUE FALSE 49484.11574 32702.19978 37173.35521 32832.78383 29949.95212 32643.73762 36190.86066 36892.59163 33545.234 38936.6458 1.270887996 0.839882304 0.954713855 0.843236061 0.769197025 0.838380835 0.929480697 0.947503075 0.861533738 1 15.24884099 -4.757629351 24.99969478 0.882321684 1.270888552 0.750290498 0.06637043 55.40102121 363464.5123 0.01692585 0.123797078 1.75E-05 4.757629351 0.388566868 RNS(ph)LPQIPMLNLEAR ddPTM_A459_MK2206_30min_R1 2 RNSLPQIPMLNLEAR 15 1 Q14289;H0YB74;Q14289-2 Q14289 PTK2B Protein-tyrosine kinase 2-beta 1 RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR 126.8 0.00057071 32357000 4410 3860.4 4380.9 3558.3 4031.9 3273.4 3607.1 3992 3542.4 3170.3 TRUE FALSE 4034.906342 3609.087258 4083.536714 3832.360883 3871.300885 3458.737079 3366.476941 3957.098365 3910.645157 3563.060699 1.132427057 1.012917703 1.14607554 1.075581138 1.086509945 0.970720785 0.944827278 1.110589659 1.097552214 1 11.79890135 -6.637640909 12.29827482 1.026671067 1.088875747 0.243396988 0.058070476 0.764491542 78.93467275 0.020129358 0.02012665 2.30E-07 6.637640909 0.062204681 RNS(ph)LPQIPMLNLEAR ddPTM_A459_MK2206_30min_R2 3 RNSLPQIPMLNLEAR 15 1 Q14289;H0YB74;Q14289-2 Q14289 PTK2B Protein-tyrosine kinase 2-beta 1 RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR 152.89 0.00011202 28434400 50353.4 68872.5 69122.4 77189.1 70684.9 63292.1 67825.4 50691.5 61785.8 62570.4 TRUE FALSE 54208.49502 65452.3918 71426.90632 70882.50361 67909.45566 65700.72522 58919.84351 57317.0531 67159.8172 60528.73297 0.895582847 1.081344158 1.180049587 1.171055466 1.121937505 1.085446894 0.973419409 0.946939582 1.109552669 1 15.88533253 -7.170397809 5.703978515 1.00336814 1.099180956 0.182411973 0.083330152 0.373779222 18.62752933 0.033866219 0.026059324 6.75E-08 7.170397809 0.095812816 RNS(ph)LTGEEGQLAR ddPTM_A459_MK2206_30min_R1 4 RNSLTGEEGQLAR 13 1 Q9BX95 Q9BX95 SGPP1 Sphingosine-1-phosphate phosphatase 1 1 RNS(0.987)LT(0.013)GEEGQLAR;RNS(1)LTGEEGQLAR;RNS(0.927)LT(0.073)GEEGQLAR;RNS(0.972)LT(0.028)GEEGQLAR 144.18 0.0010094 70203000 10756.52 10312.34 8931.96 7849.58 11855.18 10600.81 10815.27 8623.02 9169.31 8232.75 TRUE FALSE 9841.621489 9641.004792 8325.683441 8454.156012 11382.96308 11201.0187 10093.80307 8547.629845 10122.49259 9252.685224 1.063650308 1.041968311 0.899812675 0.913697571 1.230233473 1.210569519 1.09090527 0.923799917 1.094005939 1 13.1756564 -4.750762189 21.15058378 1.046374896 1.063650509 0.002434772 0.110133534 1205.737372 2387212.927 0.030177576 0.362676263 1.78E-05 4.750762189 0.017275613 RNS(ph)LTGEEGQLAR ddPTM_A459_MK2206_30min_R2 1 RNSLTGEEGQLAR 13 1 Q9BX95 Q9BX95 SGPP1 Sphingosine-1-phosphate phosphatase 1 1 RNS(1)LTGEEGQLAR 151.38 0.00023982 42356000 6219 11351 10932 11152 10141 11088 14841 0 13653 12420 TRUE FALSE 6695.131422 10787.32585 11296.46742 10240.84593 9742.813386 11509.96161 12892.35887 0 14840.51326 12014.73642 0.557243304 0.89784124 0.940217665 0.852357103 0.810905296 0.957987026 1.073045502 0 1.235192579 1 13.55251738 RNS(ph)PAFLSTDLGDEDVGLGPPAPR ddPTM_A459_MK2206_30min_R1 2 RNSPAFLSTDLGDEDVGLGPPAPR 24 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 RNS(0.987)PAFLS(0.011)T(0.003)DLGDEDVGLGPPAPR;RNS(0.971)PAFLS(0.025)T(0.004)DLGDEDVGLGPPAPR 94.456 6.47E-06 5359100 1635.22 1778.74 1561.93 1580.58 1741.73 1463.53 2004.13 2078.35 1364.06 1755.33 TRUE FALSE 1496.135952 1662.943703 1455.910543 1702.316545 1672.353206 1546.393804 1870.438144 2060.179205 1505.858918 1972.793532 0.758384457 0.842938541 0.737994382 0.862896455 0.847708175 0.783859932 0.948116523 1.044295397 0.763312984 1 10.94602426 -7.266686654 24.17532092 0.942622523 0.808767425 0.416470857 0.077196694 274.2633465 1263580.576 0.030191286 0.021069764 5.41E-08 7.266686654 -0.133855098 RNS(ph)PAFLSTDLGDEDVGLGPPAPR ddPTM_A459_MK2206_30min_R2 1 RNSPAFLSTDLGDEDVGLGPPAPR 24 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 RNS(0.986)PAFLS(0.011)T(0.003)DLGDEDVGLGPPAPR 94.564 0.00088877 0 4702.5 6741 4799.1 5909.4 6240.2 3933.7 5913.8 4712.9 6575.2 5411.5 TRUE FALSE 5062.527016 6406.251742 4959.099599 5426.583117 5995.178394 4083.39971 5137.310956 5328.892212 7147.099011 5234.923198 0.967068059 1.223752766 0.94731086 1.036611792 1.145227574 0.78003049 0.981353644 1.017950409 1.365272945 1 12.35395266 -8.062816104 24.99215104 1.185628784 1.013439216 0.19538293 0.138166334 350.142293 139305.6557 0.090575384 0.034234345 8.65E-09 8.062816104 -0.172189568 RNS(ph)S(ph)SPVSPASVPGQR ddPTM_A459_MK2206_30min_R2 1 RNSSSPVSPASVPGQR 16 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 2 RNS(0.987)S(0.832)S(0.144)PVS(0.035)PAS(0.002)VPGQR 103.66 0.025109 0 18314 22194 22005 19865 19240 17530 23000 15725 18826 16265 TRUE FALSE 19716.13392 21091.87823 22738.63572 18241.96596 18484.54093 18197.11643 19980.07237 17780.31149 20463.45145 15734.27438 1.253069156 1.340505302 1.445165831 1.159377643 1.174794622 1.156527209 1.269843902 1.130036954 1.300565311 1 13.94162303 -14.52287874 0.052770396 0.083529439 1.685126368 0.434744746 0.089415027 492.7555321 1.909620337 62.53784416 12.83220632 3.00E-15 14.52287874 1.601596928 RNS(ph)SEASSGDFLDLK ddPTM_A459_MK2206_30min_R1 10 RNSSEASSGDFLDLK 15 1 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 RNS(0.753)S(0.119)EAS(0.114)S(0.014)GDFLDLK;RNS(0.765)S(0.227)EAS(0.005)S(0.003)GDFLDLK;RNS(0.716)S(0.284)EASSGDFLDLK;RNS(0.997)S(0.003)EASSGDFLDLK;RNS(0.939)S(0.061)EASSGDFLDLK;RNS(0.943)S(0.057)EASSGDFLDLK;RNS(0.5)S(0.5)EASSGDFLDLK;RNS(0.936)S(0.063)EASSGDFLDLK;RNS(0.901)S(0.099)EASSGDFLDLK;RNS(0.892)S(0.108)EASSGDFLDLK 278.79 7.82E-55 6687653300 80317.8 93768.9 85845.8 62832.2 61211.5 66419.3 82809.1 64644.5 94308.9 105620.7 TRUE FALSE 73486.34934 87664.52757 80018.82628 67671.54693 58773.31634 70179.90337 77285.05603 64079.31995 104112.6476 118705.7897 0.619062891 0.738502543 0.674093711 0.570077897 0.495117521 0.591208765 0.651063914 0.539816298 0.877064614 1 16.85703078 -8.422457183 3.911288326 0.996387659 0.612461258 0.803103088 0.066240645 0.096860725 2.511122059 0.070289804 0.018504949 3.78E-09 8.422457183 -0.383926401 RNS(ph)SEASSGDFLDLK ddPTM_A459_MK2206_30min_R2 19 RNSSEASSGDFLDLK 15 1 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 RNS(0.824)S(0.17)EAS(0.001)S(0.005)GDFLDLK;RNS(0.875)S(0.125)EASSGDFLDLK;RNS(0.5)S(0.5)EASSGDFLDLK;RNS(0.834)S(0.136)EAS(0.015)S(0.015)GDFLDLK;RNS(0.976)S(0.024)EASSGDFLDLK;RNS(0.958)S(0.042)EASSGDFLDLK;RNS(0.757)S(0.242)EASSGDFLDLK;RNS(0.884)S(0.114)EASS(0.001)GDFLDLK;RNS(0.5)S(0.5)EASSGDFLDLK;RNS(0.778)S(0.222)EASSGDFLDLK;RNS(0.873)S(0.127)EASSGDFLDLK;RNS(0.723)S(0.277)EASSGDFLDLK;RNS(0.703)S(0.297)EASSGDFLDLK;RNS(0.488)S(0.488)EAS(0.009)S(0.015)GDFLDLK;RNS(0.841)S(0.158)EASSGDFLDLK;RNS(0.5)S(0.5)EASSGDFLDLK;RNS(0.758)S(0.24)EAS(0.001)S(0.001)GDFLDLK;RNS(0.675)S(0.325)EASSGDFLDLK;RNS(0.992)S(0.008)EASSGDFLDLK 216.34 6.49E-09 8085296590 4084792.2 3438634.4 3640194.5 3155862.5 2923912.1 2458012.7 3481020.1 2797589 2269295.6 3571536.7 TRUE FALSE 4397527.032 3267876.816 3761556.768 2898018.439 2809104.619 2551554.096 3023957.979 3163243.488 2466674.829 3454997.75 1.272801706 0.945840505 1.088729151 0.838790254 0.813055412 0.738511073 0.875241664 0.915555875 0.713943976 1 21.72025334 -2.878682687 0.646391086 0.834218701 6.03839943 0.609303903 0.099903221 21.42721738 0.892918066 0.041390151 137.9980931 0.001322261 2.878682687 5.204180729 RNS(ph)SSSSSPSERPR ddPTM_A459_MK2206_30min_R2 4 RNSSSSSSPSERPR 14 2 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 RNS(0.949)S(0.009)S(0.041)S(0.001)SSPSERPR;RNS(0.806)S(0.183)S(0.01)S(0.001)SSPSERPR;RNS(0.954)S(0.044)S(0.002)SSSPSERPR;RNS(0.96)S(0.013)S(0.013)S(0.013)S(0.002)SPSERPR 112.03 0.0042305 43672920 1974.7 1406.05 2328.66 1600.2 1763.22 879.37 1239.02 811.62 1304.46 2086.47 TRUE FALSE 2125.88455 1336.227602 2406.296362 1469.458541 1693.987123 912.8350416 1076.335186 917.7015207 1417.919573 2018.388655 1.053258274 0.662026909 1.192186825 0.728035474 0.839276974 0.452259301 0.533264584 0.454670372 0.702500764 1 10.97898829 -6.412936893 2.096855195 0.593438748 0.923670442 0.279676811 0.20613664 0.362082759 3.143866204 0.069114723 0.080389635 3.86E-07 6.412936893 0.330231694 RNS(ph)TIVLR ddPTM_A459_MK2206_30min_R1 1 RNSTIVLR 8 1 A0A0A0MRJ3;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-6;Q8NEY1-5;H0Y6F6 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 RNS(0.794)T(0.206)IVLR 111.27 0.0059921 3435200 1277.9 1127.1 1051.2 1384.3 977.66 1027.3 1561.1 1496.9 689.97 1057.3 TRUE FALSE 1169.207894 1053.725585 979.8474728 1490.919026 938.717732 1085.464838 1456.961867 1483.812761 761.6948506 1188.286306 0.9839446 0.88676069 0.82458871 1.254679969 0.789976058 0.913470796 1.226103389 1.248699706 0.641002801 1 10.21466677 RNS(ph)TIVLR ddPTM_A459_MK2206_30min_R2 4 RNSTIVLR 8 1 A0A0A0MRJ3;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-6;Q8NEY1-5;H0Y6F6 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 RNS(0.903)T(0.097)IVLR;RNS(0.911)T(0.089)IVLR;RNS(0.809)T(0.191)IVLR;RNS(0.815)T(0.185)IVLR 120.63 0.0037432 17924700 42157.7 46029.2 52294 52051 40891.6 44317.7 47706.7 34348.6 44134.7 40111.6 TRUE FALSE 45385.32593 43743.45686 54037.45586 47798.2668 39285.99032 46004.24113 41442.75298 38838.07996 47973.45643 38802.76178 1.16964164 1.127328439 1.392618808 1.231826412 1.012453457 1.185591928 1.068036168 1.000910198 1.236341287 1 15.24387172 -6.238350952 22.54519865 1.088226887 1.234585318 0.353844907 0.096788022 265.7432777 259489.3464 0.028447047 0.036684529 5.78E-07 6.238350952 0.146358431 RNS(ph)TTFPSR ddPTM_A459_MK2206_30min_R1 1 RNSTTFPSR 9 1 Q96E09 Q96E09 FAM122A Protein FAM122A 1 RNS(0.994)T(0.005)T(0.001)FPSR 115.92 0.004114 8038400 638.74 809.67 762.8 544.39 767.66 731.03 954.5 823.07 801.11 607.06 TRUE FALSE 584.4118088 756.9603358 711.0232613 586.3190121 737.0824767 772.4202869 890.8270466 815.8739858 884.3882513 682.2671759 0.856573245 1.109477874 1.042147837 0.859368636 1.080342867 1.132137547 1.305686508 1.195827697 1.296249157 1 9.414192999 -6.733648847 2.507397246 1.213971207 0.982559615 0.46976602 0.108134493 0.237989861 3.06604465 0.039166606 0.036872733 1.85E-07 6.733648847 -0.231411592 RNS(ph)TTFPSR ddPTM_A459_MK2206_30min_R2 1 RNSTTFPSR 9 1 Q96E09 Q96E09 FAM122A Protein FAM122A 1 RNS(0.951)T(0.011)T(0.011)FPS(0.027)R 66.326 0.043936 1056300 3709.9 7700.1 4138.5 8883.8 8938.7 10051 7025.4 6731.1 7026.3 4759.6 TRUE FALSE 3993.932796 7317.724231 4276.475524 8157.965122 8587.721725 10433.49785 6102.956541 7610.877881 7637.434873 4604.294642 0.867436406 1.589325793 0.928801447 1.771816479 1.865154686 2.266036095 1.32549218 1.652995404 1.658763278 1 12.16876444 -5.773254966 24.99074091 1.697102263 1.17460166 0.293601328 0.362178837 256.411066 542326.0986 0.099349348 0.14869001 1.69E-06 5.773254966 -0.522500603 RNS(ph)TTIMSR ddPTM_A459_MK2206_30min_R1 1 RNSTTIMSR 9 1 G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-2;Q7Z309 G1UD79;Q7Z309-2 SPACIA2;FAM122B Protein FAM122B 1 RNS(0.987)T(0.007)T(0.007)IMSR 128.88 0.0075736 44177000 5117.5 4594.3 4649.3 3740.8 5001.1 5277.9 5914.4 6475.1 4879.6 4711.5 TRUE FALSE 4682.229752 4295.210235 4333.71847 4028.917064 4801.895597 5576.730137 5519.861167 6418.488883 5386.851882 5295.19619 0.884241034 0.811152237 0.818424533 0.760862661 0.906839978 1.053167803 1.042428074 1.212134292 1.017309215 1 12.37046842 -6.674916873 2.640795542 1.082079021 0.818075536 0.782505427 0.061425164 0.116726453 1.656539298 0.021982702 0.021445933 2.11E-07 6.674916873 -0.264003485 RNS(ph)TTIMSR ddPTM_A459_MK2206_30min_R2 2 RNSTTIMSR 9 1 G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-2;Q7Z309 G1UD79;Q7Z309-2 SPACIA2;FAM122B Protein FAM122B 1 RNS(0.992)T(0.006)T(0.002)IMSR;RNS(0.729)T(0.061)T(0.211)IMSR 131.42 0.0064792 34837000 36800 49901 43004 48250 44046 40306 44639 40243 41301 45839 TRUE FALSE 39617.43629 47422.9889 44437.7319 44307.82066 42316.53273 41839.87307 38777.84568 45502.89827 44893.28632 44343.27718 0.893425989 1.069451604 1.00213008 0.999200408 0.954294211 0.943544901 0.874492102 1.026151001 1.012403439 1 15.43642778 RNS(ph)VERPAEPVAGAATPSLVEQQK ddPTM_A459_MK2206_30min_R1 2 RNSVERPAEPVAGAATPSLVEQQK 24 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK 90.06 6.56E-05 25185000 1795.57 2059.14 1874.33 1745.18 1570.05 1354.25 1356.75 1655.53 1452.92 1291.58 TRUE FALSE 1642.847343 1925.089612 1747.105702 1879.594066 1507.511584 1430.926465 1266.243683 1641.055876 1603.956233 1451.590681 1.131756606 1.326193146 1.203580131 1.29485129 1.038523878 0.985764433 0.872314558 1.130522465 1.104964543 1 10.50341899 -6.307480043 6.975578113 1.018428807 1.242673685 0.62894164 0.08165982 0.159666205 20.24652004 0.0261312 0.029878255 4.93E-07 6.307480043 0.224244878 RNS(ph)VERPAEPVAGAATPSLVEQQK ddPTM_A459_MK2206_30min_R2 3 RNSVERPAEPVAGAATPSLVEQQK 24 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(0.984)VERPAEPVAGAAT(0.015)PS(0.001)LVEQQK;RNS(0.996)VERPAEPVAGAAT(0.003)PS(0.001)LVEQQK 62.099 0.0066493 48228600 21626.9 32813.3 32419.8 27988.9 33801.1 25682.9 22757.1 20106.8 24268.9 22532.7 TRUE FALSE 23282.67209 31183.83924 33500.65995 25702.11734 32473.89898 26660.28076 19769.06543 22734.8278 26379.76505 21797.45984 1.068136942 1.430618038 1.536906602 1.179133602 1.489801987 1.223091174 0.906943542 1.043003541 1.210221982 1 14.4118724 -7.021394113 7.367953806 1.045852458 1.348952549 0.4796036 0.147645331 0.162098306 40.48976033 0.054490633 0.04391572 9.52E-08 7.021394113 0.303100091 RNS(ph)VTPLASPEPTK ddPTM_A459_MK2206_30min_R1 3 RNSVTPLASPEPTK 14 1 Q5W015;Q5VX20;A0A1W2PR17;Q16875-3;Q16875-2;Q16875;Q16875-4;Q9H178 Q5W015 PFKFB3 "6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase" 1 RNS(0.773)VT(0.226)PLASPEPTK;RNS(0.965)VT(0.035)PLASPEPTK;RNS(0.987)VT(0.013)PLASPEPTK 210.67 7.55E-06 36087000 26620.2 25414.1 27714.2 20719.4 22459.1 20946.6 24440 23063.4 27306.5 26838.1 TRUE FALSE 24356.0122 23759.63747 25833.03732 22315.21178 21564.50649 22132.57839 22809.65219 22861.75913 30145.10839 30163.00645 0.807479594 0.787707867 0.856447694 0.739820542 0.714932264 0.733765662 0.756212821 0.757940332 0.999406622 1 14.88049261 -8.263065446 24.84279951 0.999703353 0.768393569 0.85173501 0.038452214 51.34753616 784439.6466 0.03484587 0.010836606 5.46E-09 8.263065446 -0.231309785 RNS(ph)VTPLASPEPTK ddPTM_A459_MK2206_30min_R2 2 RNSVTPLASPEPTK 14 1 Q5W015;Q5VX20;A0A1W2PR17;Q16875-3;Q16875-2;Q16875;Q16875-4;Q9H178 Q5W015 PFKFB3 "6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase" 1 RNS(0.998)VT(0.002)PLASPEPTK;RNS(0.646)VT(0.353)PLAS(0.001)PEPTK 201.4 0.00010601 52761000 97305 131250 110155 125369 118715 87157 127652 97744 109284 111423 TRUE FALSE 104754.7456 124732.3159 113827.5127 115125.9517 114053.6526 90473.82071 110891.1391 110519.4764 118789.3248 107787.2766 0.971865594 1.157208158 1.056038489 1.068084799 1.058136509 0.839373844 1.028796186 1.025348073 1.102071863 1 16.71782736 -4.433375976 13.22250454 1.035590351 7.80E-05 0.058844564 0.078173967 191907.6836 641710.7513 0.020373078 5549606.625 3.69E-05 4.433375976 -1.035512334 RNSNS(ph)PPSPSSMNQR ddPTM_A459_MK2206_30min_R1 1 RNSNSPPSPSSMNQR 15 1 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RNS(0.471)NS(0.496)PPS(0.028)PS(0.002)S(0.002)MNQR 80.585 0.014838 2534200 615.72 671.21 690.45 495.34 942.86 720.55 626.47 654.92 329.4 435.66 TRUE FALSE 563.3497807 627.514107 643.5841777 533.4911726 905.3038897 761.3469183 584.6793294 649.1941035 363.6423088 489.6328499 1.150555525 1.281601321 1.314421975 1.089573898 1.848944347 1.554934312 1.194117857 1.325879388 0.742683643 1 8.935556543 -8.248103527 21.75816365 0.87134199 1.352122805 0.436610148 0.215100033 116.1945747 189582.2279 0.155263173 0.057595764 5.65E-09 8.248103527 0.480780815 RNSS(ph)EASSGDFLDLK ddPTM_A459_MK2206_30min_R1 6 RNSSEASSGDFLDLK 15 1 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 RNS(0.233)S(0.766)EAS(0.001)SGDFLDLK;RNS(0.352)S(0.647)EASS(0.001)GDFLDLK;RNS(0.266)S(0.723)EAS(0.003)S(0.009)GDFLDLK;RNS(0.152)S(0.841)EAS(0.005)S(0.003)GDFLDLK;RNS(0.459)S(0.532)EAS(0.004)S(0.004)GDFLDLK;RNS(0.498)S(0.5)EAS(0.002)SGDFLDLK 144.18 0.00019219 12846300 8658.84 9639.17 9123.81 6243.13 7726.85 7458.15 9267.73 7513.4 9446.59 10108.7 TRUE FALSE 7922.360189 9011.658281 8504.511198 6723.976954 7419.073203 7880.424008 8649.496642 7447.711136 10428.59684 11361.04207 0.697326895 0.793207016 0.748567882 0.591845089 0.653027526 0.693635668 0.761329514 0.65554824 0.917926082 1 13.47180755 -8.393170985 3.872164492 0.996364369 0.700977055 0.776936412 0.056274663 0.10678946 2.616765469 0.058047652 0.015338539 4.04E-09 8.393170985 -0.295387315 RNSS(ph)EASSGDFLDLK ddPTM_A459_MK2206_30min_R2 17 RNSSEASSGDFLDLK 15 1 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 RNS(0.361)S(0.637)EAS(0.001)S(0.001)GDFLDLK;RNS(0.137)S(0.863)EASSGDFLDLK;RNS(0.096)S(0.904)EASSGDFLDLK;RNS(0.302)S(0.508)EAS(0.02)S(0.169)GDFLDLK;RNS(0.055)S(0.938)EAS(0.001)S(0.006)GDFLDLK;RNS(0.096)S(0.902)EASS(0.001)GDFLDLK;RNS(0.365)S(0.635)EASSGDFLDLK;RNS(0.329)S(0.671)EASSGDFLDLK;RNS(0.351)S(0.649)EASSGDFLDLK;RNS(0.36)S(0.64)EASSGDFLDLK;RNS(0.021)S(0.978)EASSGDFLDLK;RNS(0.217)S(0.783)EASSGDFLDLK;RNS(0.362)S(0.636)EASS(0.002)GDFLDLK;RNS(0.12)S(0.878)EAS(0.001)SGDFLDLK;RNS(0.288)S(0.712)EASSGDFLDLK;RNS(0.037)S(0.962)EASSGDFLDLK;RNS(0.343)S(0.655)EASS(0.002)GDFLDLK 184.99 1.09E-05 714297170 633787.8 580966.4 551102.3 522688.1 470721.7 400413 592558.9 453967.3 385609.1 569297.7 TRUE FALSE 682311.0813 552116.4534 569475.7756 479982.8102 452238.8009 415650.9973 514755.2046 513302.3848 419148.6825 550721.5627 1.238940197 1.002532842 1.034053893 0.871552601 0.821175039 0.75473892 0.934692301 0.932054271 0.761090015 1 19.07096357 -4.53912049 0.877083985 0.861480231 1.567234309 0.650648267 0.081623232 2.012332644 0.906740978 0.028815873 1.510092672 2.89E-05 4.53912049 0.705754079 RNSS(ph)KT(ph)RAT(ph)QGQGQSS(ph)SK ddPTM_A459_MK2206_30min_R1 1 RNSSKTRATQGQGQSSSK 18 3 Q8NEE8 Q8NEE8 TTC16 Tetratricopeptide repeat protein 16 4 RNS(0.099)S(0.912)KT(0.996)RAT(0.993)QGQGQS(0.219)S(0.483)S(0.298)K 59.789 0.040917 0 1194.4 688.32 856.72 778.97 1004.9 1036.1 896.43 979.71 469.8 408.58 TRUE FALSE 1092.810008 643.5102429 798.5682334 838.9664044 964.8727051 1094.763087 836.6307903 971.1444988 518.6373912 459.197975 2.37982323 1.40137866 1.739049989 1.827025488 2.101212892 2.384076468 1.821939198 2.114871039 1.129441808 1 8.84297247 -8.303386337 6.528917581 1.045862151 1.952730381 0.619173056 0.284117041 0.1631535 18.92605626 0.271315421 0.07279644 4.97E-09 8.303386337 0.906868231 RNSS(ph)SPVSPASVPGQR ddPTM_A459_MK2206_30min_R1 1 RNSSSPVSPASVPGQR 16 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 RNS(0.035)S(0.482)S(0.482)PVSPASVPGQR 101.05 0.0029175 6719200 1292.1 1257.9 1617.7 1420.7 1735.2 1175.6 1294.7 1481 679.8 504.37 TRUE FALSE 1182.20011 1176.010481 1507.895031 1530.12256 1666.08331 1242.161456 1208.332925 1468.051773 750.4676427 566.8551634 2.085541751 2.074622509 2.66010637 2.699318378 2.939169328 2.191320705 2.131643149 2.589818119 1.323914275 1 9.14683635 -8.359777129 3.974296217 1.023363874 2.427786229 0.757674655 0.28666451 0.115694082 3.06598877 0.298064402 0.079204071 4.37E-09 8.359777129 1.404422355 up RNSS(ph)SPVSPASVPGQR ddPTM_A459_MK2206_30min_R2 1 RNSSSPVSPASVPGQR 16 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 RNS(0.223)S(0.646)S(0.131)PVSPASVPGQR 102.24 0.0025899 18163000 4570.3 17201 12361 12375 15985 14787 14455 9543.1 20237 11622 TRUE FALSE 4920.205682 16346.82335 12773.10957 11363.92291 15357.34858 15349.72965 12557.04114 10790.41594 21997.17768 11242.77509 0.43763267 1.453984734 1.136117148 1.010775616 1.3659749 1.365297226 1.116898722 0.959764457 1.956561214 1 13.45671056 -4.75260938 24.98332737 1.251592194 0.437631106 0.432730662 0.283176273 320.7220556 907373.3633 0.066931971 0.783312109 1.77E-05 4.75260938 -0.813961088 RNSSEASSGDFLDLK ddPTM_A459_MK2206_30min_R1 2 RNSSEASSGDFLDLK 15 1 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 0 ; 177.39 2.64E-05 11030500 7762.3 7075.7 7419.7 6020.7 6002 6374.1 8126.5 6003.6 8577.3 9333.7 FALSE TRUE 7102.075624 6615.070644 6916.071436 6484.415357 5762.927631 6734.996034 7584.396013 5951.111158 9468.941029 10490.02922 0.677031062 0.63060555 0.65929954 0.618150362 0.549371933 0.642037872 0.723009999 0.567311209 0.902661073 1 13.35673108 -8.394189604 4.066229914 0.995346602 0.634435342 0.874475272 0.048689631 0.069490708 1.817177352 0.047021687 0.012383575 4.03E-09 8.394189604 -0.36091126 RNSSS(ph)PVSPASVPGQR ddPTM_A459_MK2206_30min_R1 3 RNSSSPVSPASVPGQR 16 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 RNS(0.003)S(0.246)S(0.751)PVSPASVPGQR;RNS(0.077)S(0.229)S(0.694)PVSPASVPGQR;RNS(0.003)S(0.248)S(0.748)PVSPASVPGQR 125.59 0.00061194 29298300 3689.9 3768.7 3799.1 3975.3 4900 4160.5 3659 4163.7 2486.36 1900.6 TRUE FALSE 3376.054629 3523.356945 3541.227677 4281.478295 4704.822624 4396.063915 3414.914786 4127.29721 2744.82602 2136.060677 1.580505023 1.649464822 1.657831032 2.004380466 2.202569747 2.058023895 1.598697464 1.932200361 1.284994406 1 11.06073691 -8.421601237 3.274099008 1.004723574 1.841377046 0.658013156 0.204120479 0.150807943 3.018188589 0.217127077 0.057906943 3.79E-09 8.421601237 0.836653472 RNSSS(ph)PVSPASVPGQR ddPTM_A459_MK2206_30min_R2 2 RNSSSPVSPASVPGQR 16 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 RNS(0.012)S(0.1)S(0.885)PVS(0.004)PASVPGQR;RNS(0.254)S(0.125)S(0.617)PVS(0.004)PASVPGQR 191.15 1.88E-06 10181700 14470.8 35858 24956 35037 39717 36731 27764 20858 36496 20822 TRUE FALSE 15578.69557 34077.34386 25788.02058 32174.36502 38157.51102 38128.82394 24118.55345 23584.21222 39670.35611 20142.57985 0.773421066 1.691806319 1.280273966 1.597330892 1.894370598 1.892946397 1.197391478 1.170863534 1.969477416 1 14.29796085 -3.611702369 12.11795008 1.475795227 1.403160608 0 0.397844864 0 0 0.088858395 0 0.000244511 3.611702369 -0.072634619 RNSVT(ph)PLASPEPTK ddPTM_A459_MK2206_30min_R2 1 RNSVTPLASPEPTK 14 1 Q5W015;Q5VX20;A0A1W2PR17;Q16875-3;Q16875-2;Q16875;Q16875-4;Q9H178 Q5W015 PFKFB3 "6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase" 1 RNS(0.005)VT(0.994)PLAS(0.001)PEPTK 132.23 0.017212 0 11817 11488 9201.7 15973 14288 9747.6 12657 11290 11996 9968.9 TRUE FALSE 12721.71861 10917.52263 9508.480085 14667.9548 13726.98133 10118.55175 10995.1207 12765.64176 13039.3904 9643.615609 1.319185575 1.132098485 0.985987048 1.521001603 1.423426844 1.049248763 1.14014506 1.323740211 1.352126726 1 13.23535843 -9.90100949 15.22541084 1.000000224 1.244603793 0.176661215 0.161361367 0 0 0.164417594 0.039877124 1.26E-10 9.90100949 0.244603569 RNT(ph)LDVGEVLSK ddPTM_A459_MK2206_30min_R1 2 RNTLDVGEVLSK 12 1 E7EUN2 E7EUN2 AGAP1 1 RNT(1)LDVGEVLSK;RNT(1)LDVGEVLSK 120.59 0.0049863 8650000 8942.5 8722.3 7556.5 7474.8 7792.5 7092.3 8049 7631.4 6672 6603 TRUE FALSE 8181.893416 8154.476685 7043.585834 8050.510391 7482.108224 7493.859897 7512.065896 7564.679474 7365.578276 7421.02949 1.102528083 1.098833618 0.949138639 1.084823932 1.008230493 1.009814057 1.012267355 1.01935715 0.992527827 1 12.85740362 -5.182857186 10.88697507 1.012976852 1.100987957 0.571362095 0.031470347 0.481055251 64.97490478 0.007535018 0.019977994 6.56E-06 5.182857186 0.088011105 RNT(ph)LDVGEVLSK ddPTM_A459_MK2206_30min_R2 1 RNTLDVGEVLSK 12 1 E7EUN2 E7EUN2 AGAP1 1 RNT(1)LDVGEVLSK 104.21 0.012468 3892500 26404 29046 28826 30566 34019 26978 35285 22974 25378 32799 TRUE FALSE 28425.51054 27603.61788 29787.04445 28068.66002 32683.24313 28004.66669 30652.03712 25976.78068 27585.33257 31728.77132 0.895890681 0.869986978 0.93880233 0.884643775 1.030082218 0.882626888 0.966064422 0.818713729 0.869410678 1 14.95350403 -5.255536877 24.58387318 0.919755827 0.882938829 0.064552612 0.06067071 1255.978066 5231080.965 0.015499925 0.038711967 5.55E-06 5.255536877 -0.036816998 RNVSSFPDDAT(ph)SPLQENR ddPTM_A459_MK2206_30min_R1 1 RNVSSFPDDATSPLQENR 18 1 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 RNVSSFPDDAT(0.5)S(0.5)PLQENR 150.92 0.016924 6921300 1402.1 1282.9 1291.9 1145.2 1315.6 1122.2 1464.6 1167.8 1022.7 830.45 TRUE FALSE 1282.844032 1199.382977 1204.209427 1233.403502 1263.196866 1185.737994 1366.899206 1157.590048 1129.013325 933.3324156 1.3744771 1.285054453 1.290225655 1.321505052 1.353426545 1.270434814 1.464536304 1.240276271 1.209658323 1 9.866247192 -8.588804513 1.59895867 1.002594312 1.329554152 0.754347552 0.057636861 0.216450765 1.210759376 0.053307961 0.015447845 2.58E-09 8.588804513 0.32695984 RNVSSFPDDAT(ph)SPLQENR ddPTM_A459_MK2206_30min_R2 1 RNVSSFPDDATSPLQENR 18 1 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 RNVSSFPDDAT(0.971)S(0.029)PLQENR 150.63 0.00017454 13584000 66515 86700 63667 94104 83872 78072 84239 64492 62555 69601 TRUE FALSE 71607.43954 82394.60407 65789.626 86415.40218 80578.76386 81043.08467 73178.31811 72921.32583 67995.92083 67329.92507 1.063530658 1.223744182 0.977123113 1.283462028 1.196774893 1.203671095 1.086861719 1.083044809 1.009891527 1 16.03896024 -7.867381007 1.592604538 1.005102623 1.158574157 0.337191437 0.082404862 0.463373879 2.165549305 0.067400552 0.024383255 1.36E-08 7.867381007 0.153471534 RNVSSFPDDATS(ph)PLQENR ddPTM_A459_MK2206_30min_R1 1 RNVSSFPDDATSPLQENR 18 1 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 RNVSSFPDDAT(0.047)S(0.953)PLQENR 178.22 3.32E-09 7279400 724.76 828.98 631.22 622.12 732.92 640.39 724.52 714.28 589.77 424.43 TRUE FALSE 663.1153561 775.0132513 588.3745451 670.0357902 703.7262444 676.6483284 676.1885928 708.0351253 651.078702 477.0115927 1.390145159 1.62472624 1.233459635 1.404653053 1.47528122 1.41851548 1.417551697 1.484314294 1.364911696 1 8.897880518 -8.651862013 5.776772098 1.000001626 1.430450263 0.663112631 0.091687721 1.39630993 62.38239955 0.085919609 0.022281304 2.23E-09 8.651862013 0.430448637 RNVSSFPDDATS(ph)PLQENR ddPTM_A459_MK2206_30min_R2 1 RNVSSFPDDATSPLQENR 18 1 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 RNVSSFPDDAT(0.097)S(0.903)PLQENR 113.78 0.0010807 16174000 62324 91114 72972 94789 79506 92017 90931 65193 76846 76072 TRUE FALSE 67095.57336 86589.41125 75404.85006 87044.43549 76384.19495 95518.77141 78991.65047 73713.94894 83529.92617 73589.77687 0.911751281 1.176650004 1.024664746 1.182833257 1.037972912 1.297989687 1.073405218 1.001687355 1.135075139 1 16.16721774 -4.748322783 24.95044238 1.106543375 0.911750802 0.284067121 0.091132477 816.3663668 1552801.713 0.021752457 0.402919036 1.79E-05 4.748322783 -0.194792573 RPAAAAAAGSAS(ph)PR ddPTM_A459_MK2206_30min_R1 6 RPAAAAAAGSASPR 14 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RPAAAAAAGS(0.006)AS(0.994)PR;RPAAAAAAGS(0.04)AS(0.96)PR;RPAAAAAAGS(0.117)AS(0.883)PR;RPAAAAAAGS(0.002)AS(0.998)PR;RPAAAAAAGS(0.015)AS(0.985)PR;RPAAAAAAGS(0.001)AS(0.999)PR 163.56 0.00013716 277684800 10939.86 10206.25 11258.26 9199.68 10557.25 9341.08 11772.9 10771.72 8698.43 9765.02 TRUE FALSE 10009.36746 9541.82127 10494.08068 9908.240948 10136.73238 9869.963877 10987.55132 10677.54399 9602.662926 10974.7844 0.912033175 0.869431318 0.956199256 0.902818733 0.923638407 0.899331004 1.001163296 0.972916059 0.874975086 1 13.42190498 -7.236968704 24.68875881 0.960006624 0.911020151 0.301213247 0.038503621 884.2992041 892181.1998 0.014488318 0.011215969 5.79E-08 7.236968704 -0.048986472 RPAAAAAAGSAS(ph)PR ddPTM_A459_MK2206_30min_R2 6 RPAAAAAAGSASPR 14 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RPAAAAAAGS(0.011)AS(0.989)PR;RPAAAAAAGS(0.002)AS(0.998)PR;RPAAAAAAGS(0.112)AS(0.888)PR;RPAAAAAAGS(0.015)AS(0.985)PR;RPAAAAAAGSAS(1)PR;RPAAAAAAGS(0.139)AS(0.861)PR 154.51 0.00017595 183012600 26552.7 26939.6 28891.2 29727.2 25227.7 31194.7 30610.2 24768.7 25451.1 28102.9 TRUE FALSE 28585.59513 25601.81864 29854.41819 27298.39267 24237.13374 32381.83617 26591.04397 28006.05413 27664.79067 27185.90467 1.051485888 0.941731347 1.098157981 1.004137732 0.891533095 1.191125937 0.978118782 1.030168187 1.017615231 1 14.73057122 RPAEATSSPT(ph)SPERPR ddPTM_A459_MK2206_30min_R1 3 RPAEATSSPTSPERPR 16 2 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 RPAEATSS(0.012)PT(0.855)S(0.133)PERPR;RPAEATSSPT(0.862)S(0.138)PERPR;RPAEATSS(0.001)PT(0.855)S(0.143)PERPR 139.38 0.001307 245639500 2753.31 2428.61 2459.2 2099.93 3321.65 2821.43 3206.66 2806.63 1899.61 2033.44 TRUE FALSE 2519.126526 2270.507048 2292.276356 2261.666972 3189.341647 2981.176928 2992.749562 2782.09193 2097.081257 2285.357899 1.102289723 0.993501739 1.003027297 0.989633603 1.395554564 1.304468298 1.309532115 1.217355028 0.917616124 1 11.1582044 -6.224402565 24.98261183 1.213246747 1.018706105 0.253000678 0.138718942 731.537496 493447.1662 0.041872798 0.054056037 5.96E-07 6.224402565 -0.194540642 RPAEATSSPT(ph)SPERPR ddPTM_A459_MK2206_30min_R2 1 RPAEATSSPTSPERPR 16 2 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 RPAEAT(0.06)S(0.06)S(0.06)PT(0.806)S(0.013)PERPR 88.283 0.045696 70643000 5492.6 7576.1 6933.4 6070.2 6055.5 8157.4 7011.2 5415.2 6187.3 5976.2 TRUE FALSE 5913.117679 7199.881891 7164.556096 5574.245242 5817.730644 8467.835573 6090.621018 6122.985233 6725.46017 5781.197083 1.022818906 1.245396375 1.239285911 0.964202597 1.006319376 1.464720101 1.053522468 1.059120654 1.163333488 1 12.49715254 -9.476026753 0.690556956 0.995088163 1.142966087 0.072648173 0.142767744 12.95282963 7.023468276 0.331705537 0.053951555 3.34E-10 9.476026753 0.147877924 RPAEATSSPTS(ph)PERPR ddPTM_A459_MK2206_30min_R1 1 RPAEATSSPTSPERPR 16 2 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 RPAEATSSPT(0.042)S(0.958)PERPR 121.77 0.0016938 13202000 2130.3 2182.1 1811.1 1611.2 1917.8 1992.2 1983.7 2001.6 1771.4 1614.9 TRUE FALSE 1949.106798 2040.044893 1688.167578 1735.294903 1841.409965 2104.996642 1851.370992 1984.100222 1955.543369 1814.966004 1.073908158 1.12401273 0.9301373 0.956103255 1.014569948 1.159799488 1.020058221 1.093188643 1.077454545 1 10.82572681 RPAEATSSPTS(ph)PERPR ddPTM_A459_MK2206_30min_R2 1 RPAEATSSPTSPERPR 16 2 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 RPAEATSSPT(0.018)S(0.982)PERPR 87.356 0.016723 56473000 114940 123640 129110 152080 119630 158050 123640 100390 124530 116040 TRUE FALSE 123739.8948 117500.2174 133414.463 139654.5775 114932.7251 164064.7035 107405.9195 113511.3177 135361.3943 112253.6243 1.102324273 1.046738741 1.18850918 1.244098606 1.023866497 1.461553732 0.956814714 1.011204034 1.20585322 1 16.7764025 RPAEDMEEEQAFK ddPTM_A459_MK2206_30min_R1 2 RPAEDMEEEQAFK 13 1 P61978;P61978-2;P61978-3;Q5T6W2;S4R457 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 140.33 0.001201 21372400 8940.1 10069.6 9187.7 6791 7517.4 8529.5 9483.6 8452.5 9606.6 10879.5 FALSE TRUE 8179.697549 9414.06721 8564.064522 7314.043997 7217.96604 9012.432919 8850.966348 8378.600684 10605.24045 12227.3346 0.668968162 0.769919817 0.70040322 0.598171575 0.590313938 0.737072569 0.723867191 0.68523525 0.867338696 1 13.57782233 -8.456965134 2.156885489 1.000362433 0.682238679 0.788659014 0.053763139 0.142078337 1.441986778 0.056429449 0.015712003 3.49E-09 8.456965134 -0.318123753 RPAEDMEEEQAFK ddPTM_A459_MK2206_30min_R2 1 RPAEDMEEEQAFK 13 1 P61978;P61978-2;P61978-3;Q5T6W2;S4R457 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 101.43 0.01772 0 21453 24263 22334 24475 20765 18140 30873 23309 19292 19984 FALSE TRUE 23095.45817 23058.1347 23078.60441 22475.31421 19949.66176 18830.33041 26819.33801 26355.56633 20969.98329 19331.92372 1.19467977 1.192749105 1.19380796 1.162601019 1.031954298 0.974053627 1.387308289 1.363318349 1.084733397 1 14.23869759 -7.263461337 24.99924597 1.239116526 1.1286659 0.073507091 0.128652801 388.1732593 4799265.15 0.05312445 0.037843991 5.45E-08 7.263461337 -0.110450626 RPAEDMEEEQAFKR ddPTM_A459_MK2206_30min_R1 1 RPAEDMEEEQAFKR 14 2 P61978;P61978-2;P61978-3;Q5T6W2;S4R457 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 128.08 0.00073803 14546000 2061.3 2115.3 2279.6 1719.2 1890.7 1956.3 1589.4 1961.1 1552.3 1267.7 FALSE TRUE 1885.975611 1977.593586 2124.867103 1851.613082 1815.389415 2067.064015 1483.374026 1943.954309 1713.66714 1424.752247 1.323721802 1.388026297 1.491394106 1.299603553 1.274179016 1.450823482 1.041145244 1.364415683 1.20278255 1 10.47649535 -9.258296477 0.217345487 0.86142823 1.445991844 0.50759618 0.107862842 5.619142886 0.557397495 0.92926372 0.311784264 5.52E-10 9.258296477 0.584563614 RPAS(ph)GDDLSAK ddPTM_A459_MK2206_30min_R1 2 RPASGDDLSAK 11 1 D6RB33;D6RAL8;D6RDV8;Q92564-2;Q92564;Q92564-3 D6RB33 DCUN1D4 DCN1-like protein;DCN1-like protein 4 1 RPAS(0.988)GDDLS(0.012)AK;RPAS(1)GDDLSAK 107.93 0.018433 10390000 3716.9 4469.5 4668.7 3513.6 3544.9 3584.4 3882.5 3904.1 3526.4 4018.1 TRUE FALSE 3400.758137 4178.534738 4351.801652 3784.218081 3403.699127 3787.34563 3623.505509 3869.966865 3892.981899 4515.892563 0.753064447 0.925295427 0.963663681 0.837977881 0.7537157 0.838670446 0.802389662 0.856966106 0.862062559 1 12.14079545 -8.950959011 1.888851833 0.999969733 0.843994298 0.362262514 0.062682393 3.40343978 13.6475472 0.064421922 0.017924713 1.12E-09 8.950959011 -0.155975435 RPAS(ph)LSTAPSEK ddPTM_A459_MK2206_30min_R1 1 RPASLSTAPSEK 12 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 RPAS(0.97)LS(0.006)T(0.021)APS(0.002)EK 110.25 0.013104 5521500 1650.8 1359.2 1577.4 1337.9 1301.3 878.15 1032.8 1110.1 990.93 928.93 TRUE FALSE 1510.390791 1270.715833 1470.330483 1440.94529 1249.466465 927.8700941 963.9037965 1100.394513 1093.94072 1044.012861 1.446716652 1.217145765 1.408345182 1.380198792 1.196792215 0.888753509 0.923268124 1.054004748 1.04782303 1 10.02792377 -6.545780581 3.938613533 0.983567926 1.352071305 0.854957351 0.073837454 0.082391215 2.853678157 0.025699037 0.026736987 2.85E-07 6.545780581 0.36850338 RPAS(ph)LSTAPSEK ddPTM_A459_MK2206_30min_R2 1 RPASLSTAPSEK 12 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 RPAS(0.999)LS(0.001)T(0.001)APSEK 129.17 0.0042151 4372900 22650 22451 19224 17880 14825 13968 12047 10314 7669.7 12318 TRUE FALSE 24384.10141 21336.11599 19864.91857 16419.1468 14242.89601 14499.56203 10465.21443 11662.07521 8336.796642 11916.06467 2.046321675 1.790533753 1.667070389 1.377900109 1.195268439 1.216807934 0.878244179 0.978685123 0.69962667 1 13.54062024 -5.653629854 0.528839343 0.842567391 2.295483543 0.940885712 0.099822878 0.393303321 0.158777862 0.066757816 0.320312427 2.22E-06 5.653629854 1.452916152 up RPAS(ph)MAVMEGDLVK ddPTM_A459_MK2206_30min_R2 1 RPASMAVMEGDLVK 14 1 Q68EM7-5;Q68EM7-3;Q68EM7-6;Q68EM7;Q68EM7-2 Q68EM7-5 ARHGAP17 Rho GTPase-activating protein 17 1 RPAS(1)MAVMEGDLVK 97.271 0.014836 0 11402 10659 12092 12475 11173 13371 11350 10349 9823.2 12907 TRUE FALSE 12274.94589 10129.68956 12495.14124 11455.75259 10734.29188 13879.84277 9859.731366 11701.64983 10677.60418 12485.84565 0.983108893 0.811293832 1.000744491 0.917499136 0.859716849 1.111646193 0.789672694 0.937193216 0.855176692 1 13.60800592 -10.14294328 8.034063472 0.999999874 0.918409482 0.066404186 0.091732919 0 0 0.082971659 0.020123583 7.20E-11 10.14294328 -0.081590391 RPAS(ph)PALLLPPCMLK ddPTM_A459_MK2206_30min_R1 2 RPASPALLLPPCMLK 15 1 Q9HAW0-2;Q9HAW0 Q9HAW0-2 BRF2 Transcription factor IIIB 50 kDa subunit 1 RPAS(1)PALLLPPCMLK;RPAS(1)PALLLPPCMLK 115.26 0.0012293 13019100 9694 9092.1 10355.9 8519.4 10043 9101.7 10235.2 9307.4 8662.5 8381.5 TRUE FALSE 8869.474395 8500.202637 9652.970361 9175.565664 9642.966044 9617.030388 9552.428483 9226.026383 9562.997874 9419.863497 0.941571435 0.902370044 1.02474631 0.974065672 1.023684265 1.020930971 1.01407292 0.979422513 1.015194952 1 13.20149044 -5.26180038 24.99998563 1.006018899 0.921970735 0.762210874 0.018887028 13.54100449 937818.351 0.004747074 0.010974575 5.47E-06 5.26180038 -0.084048164 RPAS(ph)PALLLPPCMLK ddPTM_A459_MK2206_30min_R2 2 RPASPALLLPPCMLK 15 1 Q9HAW0-2;Q9HAW0 Q9HAW0-2 BRF2 Transcription factor IIIB 50 kDa subunit 1 RPAS(1)PALLLPPCMLK;RPAS(1)PALLLPPCMLK 112.16 0.0015795 15247400 123336 131206 119033 134143 136181 133373 150753 117272 121482 139715 TRUE FALSE 132778.699 124690.5008 123001.5008 123183.0878 130833.8497 138448.603 130958.95 132599.8531 132048.2848 135156.111 0.982409882 0.922566504 0.910069844 0.911413379 0.96802023 1.024360659 0.968945829 0.981086627 0.977005655 1 17.04426722 -6.459136638 5.46934238 0.988669582 0.930020297 0.578732797 0.023551833 0.160284611 9.547600842 0.007641471 0.008562251 3.47E-07 6.459136638 -0.058649285 RPAS(ph)PS(ph)SPEHLPATPAESPAQR ddPTM_A459_MK2206_30min_R2 1 RPASPSSPEHLPATPAESPAQR 22 1 Q9H7L9 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 2 RPAS(0.978)PS(0.792)S(0.23)PEHLPATPAESPAQR 66.925 0.014895 8718000 12107 17219 15256 18763 23153 19341 20710 13460 18424 16378 TRUE FALSE 13033.92123 16363.9295 15764.62743 17230.00288 22243.89689 20077.03531 17990.75212 15219.26822 20026.48622 15843.5872 0.822662258 1.032842455 0.995016294 1.087506425 1.40396847 1.267202626 1.13552265 0.960594846 1.264012118 1 13.9516114 -5.800882628 2.965770716 1.177057401 0.94889741 0.361059527 0.131456184 0.295738017 5.304530024 0.040174204 0.068393088 1.58E-06 5.800882628 -0.228159991 RPAS(ph)PSHNGSSGGGYGASK ddPTM_A459_MK2206_30min_R1 2 RPASPSHNGSSGGGYGASK 19 1 K7ELX9;K7EQ79;K7ENM4;K7ENP7;Q6PI98;Q6PI98-3;Q6PI98-4 K7ELX9 INO80C INO80 complex subunit C 1 RPAS(0.962)PS(0.037)HNGS(0.001)SGGGYGASK;RPAS(0.995)PS(0.005)HNGSSGGGYGASK 74.325 0.0051079 4558800 1942.88 1615.48 1589.85 1345.58 2172.3 1837 1970.21 1754.87 1555.69 1756.5 TRUE FALSE 1777.627854 1510.311958 1481.935412 1449.216805 2085.772691 1941.009352 1838.780886 1739.527357 1717.409543 1974.108481 0.900471211 0.765060265 0.750685905 0.73411204 1.056564374 0.983233379 0.931448754 0.881171108 0.869967157 1 10.94698556 -6.248379509 24.99897816 0.94815038 0.783338169 0.599464093 0.066403468 591.372124 1131994.24 0.02094991 0.026878151 5.64E-07 6.248379509 -0.164812211 RPAS(ph)PSHNGSSGGGYGASK ddPTM_A459_MK2206_30min_R2 2 RPASPSHNGSSGGGYGASK 19 1 K7ELX9;K7EQ79;K7ENM4;K7ENP7;Q6PI98;Q6PI98-3;Q6PI98-4 K7ELX9 INO80C INO80 complex subunit C 1 RPAS(0.98)PS(0.02)HNGSSGGGYGASK;RPAS(0.869)PS(0.13)HNGSSGGGYGASK 77.689 0.004083 10942200 9146.5 12258.6 9462.6 16350 11269.2 13399.8 14637.3 11442.5 13078.4 14298.6 TRUE FALSE 9846.763072 11649.85575 9778.078361 15014.1527 10826.71458 13909.73878 12715.40493 12938.07404 14215.93559 13832.03785 0.711880865 0.842237122 0.70691524 1.085462089 0.782727368 1.00561746 0.919271987 0.935370057 1.027754243 1 13.7557261 -3.147090255 0.313510319 0.997491654 2.55E-13 0.448435658 0.094883682 18.86124718 0.665609188 0.089853362 8.757768789 0.000712705 3.147090255 -0.997491654 RPAS(ph)PSS(ph)PEHLPATPAESPAQR ddPTM_A459_MK2206_30min_R1 1 RPASPSSPEHLPATPAESPAQR 22 1 Q9H7L9 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 2 RPAS(0.972)PS(0.481)S(0.547)PEHLPATPAESPAQR 62.696 0.025544 6067500 436.63 347.14 439.44 256.18 397.94 329.25 547.5 484.98 326.29 350.38 TRUE FALSE 399.4923257 324.5411229 409.6120371 275.911028 382.0892071 347.8918505 510.977274 480.739871 360.2090131 393.7877196 1.014486501 0.824152473 1.040184893 0.7006593 0.970292338 0.883450227 1.297595757 1.220809708 0.914728914 1 8.621274311 -7.232267418 24.61423654 1.126684423 0.901589341 0.34763267 0.13506196 586.229562 494639.586 0.050086727 0.038790494 5.86E-08 7.232267418 -0.225095082 RPAS(ph)PSS(ph)PEHLPATPAESPAQR ddPTM_A459_MK2206_30min_R2 1 RPASPSSPEHLPATPAESPAQR 22 1 Q9H7L9 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 2 RPAS(0.781)PS(0.412)S(0.807)PEHLPATPAESPAQR 65.248 0.017225 15284000 12076 17915 13291 24543 20549 26626 20442 16538 20224 19500 TRUE FALSE 13000.54784 17025.36715 13734.11531 22537.75839 19742.14301 27639.27109 17757.94084 18699.57338 21983.04696 18863.7166 0.689182738 0.902545745 0.728070486 1.194767652 1.046566985 1.465208139 0.941380812 0.991298469 1.165361388 1 14.20332633 -5.759605813 24.99999828 1.119091879 0.786194212 0.524886001 0.148777229 39.15985971 533912.0822 0.041098852 0.066759885 1.74E-06 5.759605813 -0.332897667 RPAS(ph)PSSPEHLPATPAESPAQR ddPTM_A459_MK2206_30min_R1 1 RPASPSSPEHLPATPAESPAQR 22 1 Q9H7L9 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 1 RPAS(0.697)PS(0.151)S(0.151)PEHLPATPAESPAQR 88.433 0.00025388 13919000 693.64 696.76 772.25 698.06 826.06 784.02 977.81 867.76 841.32 660.64 TRUE FALSE 634.6422756 651.4007974 719.8318216 751.8247022 793.156281 828.4105349 912.582079 860.1732658 928.7782247 742.4850708 0.854754258 0.877325111 0.96948996 1.012578881 1.068245426 1.115726858 1.229091486 1.158505807 1.250904915 1 9.536218208 -5.93811707 0.838928572 1.172580648 0.841210262 0.741588604 0.065701792 0.343013172 0.47280927 0.029776173 0.07695367 1.15E-06 5.93811707 -0.331370387 RPAS(ph)PSSPEHLPATPAESPAQR ddPTM_A459_MK2206_30min_R2 2 RPASPSSPEHLPATPAESPAQR 22 1 Q9H7L9 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 1 RPAS(0.913)PS(0.044)S(0.044)PEHLPATPAESPAQR;RPAS(0.632)PS(0.26)S(0.107)PEHLPATPAESPAQR 94.019 0.00012757 31432000 15417 37102 25782 43617 45156 48499 45087 36404 34400 30010 TRUE FALSE 16597.33737 35259.56863 26641.55901 40053.35158 43382.94855 50344.66343 39167.02274 41162.12779 37392.04982 29030.77616 0.571715247 1.214558248 0.917700542 1.379685867 1.494377839 1.734182481 1.349155204 1.417878997 1.288014127 1 14.82529552 -4.578068425 0.854303065 1.409634525 2.70E-14 0.522780129 0.216579921 2.473477086 1.108120458 0.077705381 3.561043816 2.64E-05 4.578068425 -1.409634525 RPAS(ph)TAGLPTAGLPTATGLPSGAPPGVATIR ddPTM_A459_MK2206_30min_R1 2 RPASTAGLPTAGLPTATGLPSGAPPGVATIR 31 1 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RPAS(0.692)T(0.275)AGLPT(0.033)AGLPTATGLPSGAPPGVATIR;RPAS(0.429)T(0.429)AGLPT(0.142)AGLPTATGLPSGAPPGVATIR 89.968 3.55E-07 16180000 2401.79 2102 1882.61 1725.32 2246.32 2343.57 2063.61 2009.09 1929.3 1355.4 TRUE FALSE 2197.505148 1965.159418 1754.823678 1858.204445 2156.844318 2476.260908 1925.950342 1991.524738 2129.857639 1523.317185 1.442578847 1.290052681 1.151975239 1.219840795 1.415886553 1.625571439 1.264313409 1.307360514 1.398170821 1 10.57300066 -10.67336804 5.22834607 1.000015745 1.341830927 0.402119519 0.126539392 1.97E-05 3.21E-06 0.132587976 0.032156145 2.12E-11 10.67336804 0.341815182 RPAS(ph)TAGLPTAGLPTATGLPSGAPPGVATIR ddPTM_A459_MK2206_30min_R2 2 RPASTAGLPTAGLPTATGLPSGAPPGVATIR 31 1 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RPAS(0.485)T(0.485)AGLPT(0.03)AGLPTATGLPSGAPPGVATIR;RPAS(0.705)T(0.275)AGLPT(0.02)AGLPTATGLPSGAPPGVATIR 98.632 1.82E-08 21079700 27586 33493 28289 32386 35703 31732 32728 25827 29536 29080 TRUE FALSE 29698.00537 31829.78632 29232.14114 29739.9602 34301.12083 32939.5835 28430.77429 29202.67758 32104.98789 28131.12198 1.055699285 1.131479446 1.039138829 1.057190688 1.219329995 1.170930314 1.010651986 1.038091463 1.141262261 1 14.77987947 -10.82389908 0.445080179 0.951946599 1.099176628 0.16168377 0.064368131 50.26368462 5.473805985 2.929495129 0.038237724 1.50E-11 10.82389908 0.147230029 RPAS(ph)VSSSAAVEHEQR ddPTM_A459_MK2206_30min_R1 4 RPASVSSSAAVEHEQR 16 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RPAS(0.965)VS(0.028)S(0.006)S(0.002)AAVEHEQR;RPAS(0.998)VS(0.002)SSAAVEHEQR;RPAS(0.973)VS(0.02)S(0.007)SAAVEHEQR;RPAS(0.796)VS(0.196)S(0.006)S(0.003)AAVEHEQR 183.21 4.52E-07 82274000 6571.68 5454.65 5489.03 4840.36 6601.18 5451.11 5870.03 5679.58 3564.04 4064.35 TRUE FALSE 6012.724107 5099.551294 5116.449937 5213.165366 6338.241022 5759.747137 5478.451009 5629.924031 3934.534712 4567.872362 1.316307381 1.116395313 1.120094769 1.14126774 1.387569643 1.260925586 1.199344153 1.232504673 0.86134953 1 12.15730662 -8.254695129 24.98810429 0.930674756 1.218294174 0.640039159 0.087298805 310.5664172 1150689.581 0.065000382 0.023329177 5.56E-09 8.254695129 0.287619418 RPAS(ph)VSSSAAVEHEQR ddPTM_A459_MK2206_30min_R2 1 RPASVSSSAAVEHEQR 16 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RPAS(0.964)VS(0.03)S(0.006)SAAVEHEQR 118.23 0.00091334 49789000 31970 32426 27508 32200 23656 20539 25915 21006 33233 23114 TRUE FALSE 34417.64778 30815.77199 28425.10299 29569.157 22727.14658 21320.62604 22512.32937 23751.55632 36123.54627 22359.79207 1.539265109 1.378177932 1.271259719 1.322425401 1.016429245 0.953525237 1.006821946 1.062244061 1.615558237 1 14.44861915 -5.436407776 1.126052585 1.108851352 1.526675143 0.346914207 0.185625337 0.834756707 1.716476955 0.065844491 0.318052 3.66E-06 5.436407776 0.417823791 RPASPS(ph)SPEHLPATPAESPAQR ddPTM_A459_MK2206_30min_R2 1 RPASPSSPEHLPATPAESPAQR 22 1 Q9H7L9 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 1 RPAS(0.111)PS(0.444)S(0.444)PEHLPATPAESPAQR 64.761 0.0037525 13736000 4269.7 8345.2 5625.6 8511.9 5124.2 8567.4 9381.8 6553.3 7850 7173.7 TRUE FALSE 4596.591515 7930.789503 5813.154696 7816.450542 4922.998161 8893.43841 8149.95839 7409.838811 8532.77881 6939.622756 0.662369076 1.14282718 0.837675894 1.126350929 0.709404291 1.281544937 1.174409428 1.067758158 1.22957387 1 12.76064152 -6.774370209 24.99988919 1.156376658 0.919040864 0.377507207 0.162223035 255.294115 493571.2396 0.05318312 0.047192507 1.68E-07 6.774370209 -0.237335794 RPASPSS(ph)PEHLPATPAESPAQR ddPTM_A459_MK2206_30min_R1 1 RPASPSSPEHLPATPAESPAQR 22 1 Q9H7L9 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 1 RPAS(0.086)PS(0.205)S(0.709)PEHLPATPAESPAQR 73.603 0.0011772 14972000 942.93 942.35 1022.6 858.16 1181.6 1098.7 1156.9 1022.2 910.67 655.04 TRUE FALSE 862.728852 881.0028437 953.1887611 924.2556319 1134.53437 1160.907445 1079.725312 1013.263013 1005.337405 736.1913005 1.171881346 1.196703687 1.294756893 1.255455792 1.541086358 1.576910028 1.46663688 1.376358309 1.365592618 1 9.523936891 -6.112805381 6.600634833 1.419701142 1.227659928 0.190736036 0.152075478 0.337337907 17.4210478 0.043926743 0.057078192 7.71E-07 6.112805381 -0.192041214 RPASVS(ph)SSAAVEHEQR ddPTM_A459_MK2206_30min_R2 1 RPASVSSSAAVEHEQR 16 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RPAS(0.235)VS(0.721)S(0.041)S(0.003)AAVEHEQR 140.84 0.00020457 58089000 20007 33127 20555 29852 32457 28753 19715 16812 18562 22844 TRUE FALSE 21538.7513 31481.96135 21240.29344 27412.99611 31182.5751 29847.21556 17126.39682 19009.38612 20176.48921 22098.60215 0.97466578 1.424613246 0.961160045 1.240485526 1.4110655 1.35063817 0.774999102 0.860207627 0.913021062 1 14.43166749 -7.263118373 24.99995796 0.875407575 1.232964054 0.525209623 0.158177027 118.8691429 1769920.208 0.063566561 0.045385609 5.46E-08 7.263118373 0.357556479 RPDDVPLSLS(ph)PSK ddPTM_A459_MK2206_30min_R2 4 RPDDVPLSLSPSK 13 1 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 1 RPDDVPLS(0.007)LS(0.679)PS(0.315)K;RPDDVPLS(0.009)LS(0.941)PS(0.049)K;RPDDVPLSLS(0.998)PS(0.002)K;RPDDVPLSLS(0.911)PS(0.089)K 154.39 0.00019812 22250400 153205 128142 131880 119736 126862 88960 154797 114419 95314 145118 TRUE FALSE 164934.4926 121778.6546 136276.8134 109953.1858 121880.7604 92345.43514 134471.968 129373.9562 103604.2394 140382.8115 1.174890934 0.867475535 0.970751418 0.783238237 0.868202874 0.657811552 0.95789482 0.921579749 0.738012284 1 17.09900678 -2.245508251 1.225057757 0.848505097 199.9734907 0.439581906 0.104436983 826.683492 2.683718291 0.029595575 460928.3358 0.005681876 2.245508251 199.1249856 RPDDVPLSLS(ph)PSKR ddPTM_A459_MK2206_30min_R1 1 RPDDVPLSLSPSKR 14 2 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 1 RPDDVPLSLS(0.5)PS(0.5)KR 121.51 0.0021584 92466000 3203.2 3153 3362.8 2757.9 2472.4 2835.4 3085.2 3375.5 3085.3 2588.8 TRUE FALSE 2930.751019 2947.739127 3134.542505 2970.313936 2373.919073 2995.937898 2879.391937 3345.988359 3406.027976 2909.520088 1.007297056 1.013135857 1.077340046 1.020894802 0.815914309 1.02970174 0.989644976 1.150013837 1.17064941 1 11.50656549 -7.754093035 24.87814884 1.120248724 0.993029718 0.309574854 0.076879532 172.5439434 584320.0152 0.038048627 0.021390216 1.76E-08 7.754093035 -0.127219006 RPDDVPLSLS(ph)PSKR ddPTM_A459_MK2206_30min_R2 1 RPDDVPLSLSPSKR 14 2 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 1 RPDDVPLS(0.069)LS(0.711)PS(0.22)KR 100.07 0.010455 53585000 59943 55855 50548 56016 61010 44570 72892 50132 50848 67644 TRUE FALSE 64532.28217 53081.32192 52233.24509 51439.31361 58614.44085 46266.14258 63321.19284 56684.42453 55270.66713 65436.78182 0.986177504 0.811184787 0.79822454 0.786091739 0.895741496 0.707035727 0.967669728 0.866247131 0.844642196 1 15.99781418 -9.637047036 0.524331012 1.015674752 0.838787067 0.235661941 0.079806694 7.289441772 2.246027876 0.320325391 0.036931934 2.31E-10 9.637047036 -0.176887685 RPDDVPLSLSPS(ph)KR ddPTM_A459_MK2206_30min_R2 1 RPDDVPLSLSPSKR 14 2 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 1 RPDDVPLS(0.005)LS(0.236)PS(0.759)KR 83.243 0.031862 67466000 33127 34277 36502 34380 40248 32888 40929 31331 27195 41187 TRUE FALSE 35663.22859 32574.85402 37718.95846 31571.04402 38667.66129 34139.57589 35554.97314 35426.06928 29560.37194 39843.07156 0.895092351 0.817578885 0.946688018 0.792384793 0.970499005 0.856851004 0.892375305 0.889140016 0.741920007 1 15.28204125 -6.870492131 0.007007109 1.755193289 1.31E-06 0.059430901 0.074289167 20082.0937 59.80352954 7358.770848 7617.539087 1.35E-07 6.870492131 -1.755191984 RPDHS(ph)GGSPSPPTSEPAR ddPTM_A459_MK2206_30min_R1 1 RPDHSGGSPSPPTSEPAR 18 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 RPDHS(0.5)GGS(0.387)PS(0.114)PPTSEPAR 63.726 0.019075 1189400 390.52 332.15 390.07 324.76 335.38 490.55 319.55 405.62 315.12 284.41 TRUE FALSE 357.3042233 310.5269746 363.5931352 349.7730715 322.0211044 518.3245171 298.2334026 402.0737071 347.8778517 319.644858 1.117816271 0.971474957 1.137490956 1.094255273 1.007434021 1.621563758 0.93301486 1.25787635 1.088326131 1 8.320326076 RPDHS(ph)GGSPSPPTSEPAR ddPTM_A459_MK2206_30min_R2 1 RPDHSGGSPSPPTSEPAR 18 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 RPDHS(0.924)GGS(0.071)PS(0.005)PPTSEPAR 132.14 0.00089561 3383400 3246.1 4885 4687.2 5056.9 4027.5 5726.5 3913.8 4191.3 5536.6 3673.7 TRUE FALSE 3494.623912 4642.418003 4843.468909 4643.735094 3869.360113 5944.42597 3399.913359 4739.117301 6018.16346 3553.82747 0.983340903 1.306314964 1.362888027 1.306685576 1.088786708 1.672682768 0.956690607 1.333524866 1.693431522 1 11.79515793 -4.761522231 8.895696736 1.309038386 0.980887732 0.141843177 0.234875453 0.159818888 165.5778943 0.055208198 0.316115003 1.73E-05 4.761522231 -0.328150654 RPDHSGGS(ph)PSPPTSEPAR ddPTM_A459_MK2206_30min_R1 6 RPDHSGGSPSPPTSEPAR 18 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 RPDHS(0.003)GGS(0.959)PS(0.038)PPTSEPAR;RPDHS(0.052)GGS(0.803)PS(0.078)PPT(0.052)S(0.016)EPAR;RPDHS(0.001)GGS(0.984)PS(0.016)PPTSEPAR;RPDHS(0.015)GGS(0.562)PS(0.422)PPT(0.001)S(0.001)EPAR;RPDHS(0.028)GGS(0.879)PS(0.092)PPTSEPAR;RPDHS(0.004)GGS(0.847)PS(0.149)PPTSEPAR 157.73 3.61E-05 78684840 5331.39 5378.92 5085.62 4947.33 6293.72 5917.15 5962.05 5112.92 4108.45 3675.79 TRUE FALSE 4877.927284 5028.75133 4740.422284 5328.374214 6043.027805 6252.173919 5564.332523 5068.218279 4535.53808 4131.174616 1.180760374 1.21726913 1.147475651 1.289796416 1.462786826 1.513413133 1.346912934 1.226822575 1.097880991 1 12.01233633 -8.28266966 2.171195515 1.009074787 1.310669329 0.473962988 0.109555392 0.310230593 2.705734668 0.119823841 0.034532451 5.22E-09 8.28266966 0.301594542 RPDHSGGS(ph)PSPPTSEPAR ddPTM_A459_MK2206_30min_R2 4 RPDHSGGSPSPPTSEPAR 18 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 RPDHS(0.012)GGS(0.976)PS(0.012)PPTSEPAR;RPDHSGGS(0.979)PS(0.021)PPTSEPAR;RPDHS(0.078)GGS(0.896)PS(0.026)PPTSEPAR;RPDHS(0.025)GGS(0.785)PS(0.189)PPT(0.001)S(0.001)EPAR 129.2 0.00069466 42410100 34453.7 42264.6 39921.3 50780.9 45019.1 59715.3 52209.2 41394.3 47607.7 43709 TRUE FALSE 37091.50176 40165.80142 41252.25622 46631.93803 43251.42393 61987.80759 45354.06933 46804.67714 51748.53169 42282.77891 0.877224788 0.949932868 0.975627839 1.102858876 1.022908736 1.46602965 1.07263691 1.106944206 1.223867802 1 15.36778258 -5.772835165 1.360363249 1.167766456 0.902678395 0.386467208 0.123750684 0.458956881 1.699565929 0.041814198 0.100229315 1.69E-06 5.772835165 -0.265088061 RPDPDS(ph)DEDEDYER ddPTM_A459_MK2206_30min_R1 1 RPDPDSDEDEDYER 14 1 H0Y6J6;Q5W012;Q96I25;Q5W011;Q5W010 H0Y6J6 RBM17 Splicing factor 45 1 RPDPDS(0.999)DEDEDY(0.001)ER 133.9 0.0012371 8980500 2830 3140.3 3210.7 2364.3 2934 2945.2 3674.4 2892.4 2760.6 3073.8 TRUE FALSE 2589.293639 2935.865899 2992.76663 2546.398796 2817.132567 3111.954679 3429.28748 2867.112052 3047.574249 3454.60555 0.749519331 0.849841134 0.866312112 0.737102618 0.815471557 0.900813315 0.992671213 0.829939051 0.882177199 1 11.75430528 -6.773202333 4.709605324 0.916240237 0.805191639 0.497500185 0.059156466 0.18566122 10.38994867 0.021061053 0.019491053 1.69E-07 6.773202333 -0.111048598 RPDPDS(ph)DEDEDYER ddPTM_A459_MK2206_30min_R2 2 RPDPDSDEDEDYER 14 1 H0Y6J6;Q5W012;Q96I25;Q5W011;Q5W010 H0Y6J6 RBM17 Splicing factor 45 1 RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER 213.71 3.19E-06 85490400 170567.6 198934 183526.2 218951 168868.5 175555 173876.1 159047.6 148024.5 175042.2 TRUE FALSE 183626.3866 189055.2268 189644.8719 201062.0029 162237.8742 182235.8685 151045.9592 179835.6674 160899.4034 169330.5873 1.08442538 1.11648598 1.119968193 1.187393288 0.958113219 1.076213526 0.892018161 1.06203888 0.950208736 1 17.36948308 -6.268672707 24.99942299 0.992302404 1.125805194 0.596403884 0.055305985 383.6162293 1325831.182 0.016098968 0.018636395 5.39E-07 6.268672707 0.133502789 RPDPDS(ph)DEDEDYERER ddPTM_A459_MK2206_30min_R1 1 RPDPDSDEDEDYERER 16 2 H0Y6J6;Q5W012;Q96I25;Q5W011;Q5W010 H0Y6J6 RBM17 Splicing factor 45 1 RPDPDS(1)DEDEDYERER 127.49 0.0011681 25236000 2343 3155 2805.7 3184.2 3215.2 2756.1 2728.4 2913.5 2062.5 1744.3 TRUE FALSE 2143.715546 2949.608927 2615.256901 3429.447636 3087.131776 2912.148 2546.393414 2888.027577 2276.904256 1960.397053 1.0935109 1.504597715 1.334044497 1.749363799 1.574748223 1.485488869 1.298917181 1.473185023 1.16145056 1 10.93693017 -8.425938788 2.470288498 0.998565381 1.452407438 0.438169962 0.166100687 0.250649368 3.157783583 0.161146259 0.044233902 3.75E-09 8.425938788 0.453842057 RPDPDS(ph)DEDEDYERER ddPTM_A459_MK2206_30min_R2 1 RPDPDSDEDEDYERER 16 2 H0Y6J6;Q5W012;Q96I25;Q5W011;Q5W010 H0Y6J6 RBM17 Splicing factor 45 1 RPDPDS(1)DEDEDYERER 120.15 0.0018387 50040000 21345 28932 25667 31754 37728 29902 34952 22308 37612 19529 TRUE FALSE 22979.18961 27495.27895 26522.72497 29159.59662 36246.60915 31039.94156 30362.76042 25223.73219 40883.42377 18891.77033 1.216359781 1.455410397 1.403930098 1.543507893 1.918645448 1.643040383 1.607195085 1.335170381 2.164086428 1 14.20547028 -5.803462781 3.302953704 1.636240244 1.359859648 0.122424345 0.297819776 0.464483946 10.37234066 0.081508238 0.135717852 1.57E-06 5.803462781 -0.276380596 RPDQQLQGEGK ddPTM_A459_MK2206_30min_R1 1 RPDQQLQGEGK 11 1 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 138.2 0.0053059 0 4432.1 4709.3 4691.7 4007.8 4789.2 4750.1 4396.8 3736.3 3359.6 3250.2 FALSE TRUE 4055.126621 4402.723714 4373.240476 4316.48145 4598.436023 5019.046557 4103.497494 3703.633923 3708.842442 3652.859314 1.110123953 1.205281489 1.197210213 1.181671967 1.258859328 1.374004889 1.123365874 1.013899963 1.015325838 1 11.83481048 -7.578829761 4.228173839 1.013871722 1.221522398 0.688516074 0.063569222 0.131966925 4.893986135 0.033644691 0.018926812 2.64E-08 7.578829761 0.207650676 RPEAS(ph)PVQK ddPTM_A459_MK2206_30min_R2 2 RPEASPVQK 9 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RPEAS(1)PVQK;RPEAS(1)PVQK 70.628 0.037373 39120000 87056 68250 65609 72697 65182 54257 91310 69934 54210 84543 TRUE FALSE 93721.07429 64860.80424 67796.37131 66757.42255 62622.62717 56321.78815 79320.88732 79074.61392 58925.08781 81784.36883 1.145953385 0.793070915 0.828964902 0.81626139 0.765704108 0.688662014 0.969878333 0.96686708 0.720493276 1 16.31953751 -10.2968783 18.36525918 1 0.850499237 0.09897649 0.130500198 0 0 0.125340656 0.030399574 5.05E-11 10.2968783 -0.149500762 RPEGPGAQAPS(ph)SPR ddPTM_A459_MK2206_30min_R2 1 RPEGPGAQAPSSPR 14 1 P40222 P40222 TXLNA Alpha-taxilin 1 RPEGPGAQAPS(0.5)S(0.5)PR 84.759 0.045724 2686200 5068.3 5441 4635.6 5626.1 4245.5 5036.9 5047.9 3981.1 4356.3 4841.4 TRUE FALSE 5456.332945 5170.807852 4790.14859 5166.429633 4078.800338 5228.582759 4385.104666 4501.443439 4735.2031 4683.425514 1.165030367 1.104065355 1.022787397 1.103130522 0.87090108 1.116401391 0.936302852 0.961143382 1.011055495 1 12.19334841 -4.423848384 0.613917394 0.983777793 1.371875543 0.422958854 0.06651338 4.903709941 1.022799013 0.030269519 1.479333649 3.77E-05 4.423848384 0.38809775 RPEGPGAQAPSS(ph)PR ddPTM_A459_MK2206_30min_R1 6 RPEGPGAQAPSSPR 14 1 P40222 P40222 TXLNA Alpha-taxilin 1 RPEGPGAQAPS(0.004)S(0.996)PR;RPEGPGAQAPS(0.031)S(0.969)PR;RPEGPGAQAPS(0.002)S(0.998)PR;RPEGPGAQAPS(0.015)S(0.985)PR;RPEGPGAQAPS(0.002)S(0.998)PR;RPEGPGAQAPS(0.129)S(0.871)PR 161.94 0.00050165 546067400 15388.7 16147.6 15932.2 13436.7 16482.5 14219.86 15385.9 12956.1 11842.07 11294.33 TRUE FALSE 14079.81026 15096.38831 14850.76665 14471.59696 15825.96712 15024.97618 14359.53468 12842.82618 13073.09555 12693.55687 1.109209215 1.189295362 1.169945257 1.140074221 1.246771672 1.183669506 1.131245941 1.011759455 1.029900105 1 13.63180876 -7.661333409 3.255817691 1.013293738 1.174871973 0.812933058 0.034134801 0.102529322 2.140690172 0.018986683 0.009770996 2.18E-08 7.661333409 0.161578234 RPEGPGAQAPSS(ph)PR ddPTM_A459_MK2206_30min_R2 4 RPEGPGAQAPSSPR 14 1 P40222 P40222 TXLNA Alpha-taxilin 1 RPEGPGAQAPS(0.002)S(0.998)PR;RPEGPGAQAPS(0.105)S(0.895)PR;RPEGPGAQAPS(0.213)S(0.787)PR;RPEGPGAQAPS(0.172)S(0.828)PR 179.97 0.00013149 388438000 91992 119049 95705 103888.3 90259 102056 90687 95976 90932 81536 TRUE FALSE 99034.97825 113137.1998 98895.75693 95400.29357 86714.97814 105939.8126 78779.68797 108520.3927 98841.10099 78875.487 1.255586267 1.434377195 1.25382119 1.20950497 1.099390716 1.343127208 0.99878544 1.375844345 1.25312825 1 16.26728939 -14.52287875 0.11791151 0.291445218 1.357934495 0.2752505 0.120650763 224.3168962 1.717633545 39.07129111 1.238027316 3.00E-15 14.52287875 1.066489277 RPELEDSTLR ddPTM_A459_MK2206_30min_R1 2 RPELEDSTLR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 146.11 0.0011846 24333000 4310.6 4437.4 4523.2 4360.8 5134.1 4595.5 5023.5 4132.2 3836.2 3585.3 FALSE TRUE 3943.960834 4148.524453 4216.177786 4696.669572 4929.597925 4855.693239 4688.391481 4096.072611 4234.986718 4029.474032 0.978778075 1.029544904 1.046334522 1.165578816 1.22338496 1.205043934 1.163524431 1.016527859 1.05100236 1 11.97637582 -5.587237596 4.280549766 1.128234416 1.010357132 0.280382294 0.073491773 0.272355113 9.936752209 0.022217399 0.040921222 2.59E-06 5.587237596 -0.117877284 RPEPSTLENITDDKYATVS(ph)SPSK ddPTM_A459_MK2206_30min_R1 1 RPEPSTLENITDDKYATVSSPSK 23 2 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 RPEPSTLENITDDKY(0.012)AT(0.039)VS(0.412)S(0.412)PS(0.124)K 54.958 0.022719 50854000 2202.3 2308.9 2455.8 2029.4 1599.8 1682.8 2230.3 2244 2492.1 2744.8 TRUE FALSE 2014.98282 2158.59019 2289.107138 2185.70474 1536.076578 1778.078682 2081.520756 2224.380945 2751.162713 3084.846546 0.653187376 0.699739892 0.742048949 0.708529487 0.497942622 0.576391291 0.674756661 0.721066968 0.891831302 1 11.59098301 -8.311999251 1.809437821 0.998310823 0.648870166 0.76599896 0.065845073 0.178215373 1.125606908 0.070528527 0.020649802 4.88E-09 8.311999251 -0.349440657 RPEPSTLENITDDKYATVS(ph)SPSK ddPTM_A459_MK2206_30min_R2 1 RPEPSTLENITDDKYATVSSPSK 23 2 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 RPEPSTLENITDDKY(0.02)AT(0.029)VS(0.565)S(0.371)PS(0.014)K 69.99 0.0029385 35426000 35830 39380 46701 35980 39319 22376 45022 31162 30816 53222 TRUE FALSE 38573.17235 37424.44646 48257.98803 33040.31891 37775.1385 23227.53436 39110.55732 35234.9804 33496.31998 51485.3705 0.749206463 0.726894768 0.937314572 0.641741889 0.733706257 0.451148241 0.759644088 0.684368784 0.650598794 1 15.65187493 -10.85878076 3.597046902 1.001205362 0.704079123 0.374163423 0.114904152 67537901.61 100108603.2 858849.1149 0.029358895 1.38E-11 10.85878076 -0.297126239 RPEPSTLENITDDKYATVSS(ph)PSK ddPTM_A459_MK2206_30min_R2 2 RPEPSTLENITDDKYATVSSPSK 23 2 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 RPEPSTLENITDDKY(0.003)AT(0.016)VS(0.134)S(0.787)PS(0.059)K;RPEPSTLENITDDKYATVS(0.079)S(0.887)PS(0.034)K 99.378 3.29E-05 63676000 147647 134125 137623 131598 123898 83242 137455 113244 82292 151552 TRUE FALSE 158950.9678 127464.5475 142211.2821 120846.0224 119033.142 86409.83264 119406.9934 128045.3796 89449.60941 146606.8707 1.084198627 0.869430928 0.970017855 0.824286215 0.811920625 0.589398248 0.814470651 0.873392762 0.610132452 1 17.16159319 -5.831866055 1.759476774 0.768081835 0.979262622 0.326519766 0.122061202 0.40997257 2.589890646 0.037626292 0.073000129 1.47E-06 5.831866055 0.211180788 RPES(ph)PPSILTPPVVPTADK ddPTM_A459_MK2206_30min_R2 3 RPESPPSILTPPVVPTADK 19 1 Q6P2C6;P55198 Q6P2C6 MLLT6 Protein AF-17 1 RPES(0.984)PPS(0.014)ILT(0.002)PPVVPTADK;RPES(0.988)PPS(0.011)ILT(0.002)PPVVPTADK;RPES(0.658)PPS(0.265)ILT(0.077)PPVVPTADK 77.576 0.0041174 10817300 105385 120507 109799 118152 113540 110525 115708 99179 108235 116132 TRUE FALSE 113453.3566 114522.7976 113459.6439 108498.6037 109081.8491 114731.1063 100515.4006 112142.0358 117649.0847 112342.6224 1.009887025 1.019406484 1.009942989 0.965783078 0.970974745 1.021260711 0.894721865 0.998214511 1.047234631 1 16.77754586 -5.6438589 6.911744659 0.982553916 1.01457117 0.097349223 0.03796128 0.48068673 27.02487497 0.010487844 0.018258151 2.27E-06 5.6438589 0.032017253 RPES(ph)PSEIS(ph)PIK ddPTM_A459_MK2206_30min_R2 1 RPESPSEISPIK 12 1 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 2 RPES(0.995)PS(0.005)EIS(1)PIK 88.319 0.035845 0 48410 41130 40046 38570 37157 27874 49389 32649 29827 46946 TRUE FALSE 52116.30682 39087.54401 41381.11365 35418.70762 35698.02948 28934.7646 42904.16497 36916.3364 32421.29855 45414.15586 1.147578455 0.860690753 0.911194161 0.779904568 0.786055114 0.637130957 0.94473109 0.812881704 0.713902921 1 15.47085444 RPES(ph)PSEISPIK ddPTM_A459_MK2206_30min_R1 4 RPESPSEISPIK 12 1 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 1 RPES(0.719)PS(0.222)EIS(0.06)PIK;RPES(0.989)PS(0.008)EIS(0.002)PIK;RPES(0.947)PS(0.051)EIS(0.002)PIK;RPES(0.995)PS(0.001)EIS(0.004)PIK 112.08 0.0047446 49188700 12799.2 13597.7 15259.1 12358.8 14417.2 12820.1 13478.8 13021.9 12451.1 12072.6 TRUE FALSE 11710.56083 12712.48726 14223.35481 13310.67692 13842.9324 13545.96298 12579.65385 12908.0509 13745.4364 13568.24483 0.863085902 0.936929383 1.048282588 0.981016858 1.020244886 0.998357794 0.927139361 0.951342717 1.013059285 1 13.72794649 -4.924021456 3.753018947 0.989491363 0.865183439 0.59902445 0.03283391 0.171955973 4.47798857 0.008836645 0.046736011 1.19E-05 4.924021456 -0.124307924 RPES(ph)PSEISPIK ddPTM_A459_MK2206_30min_R2 3 RPESPSEISPIK 12 1 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 1 RPES(0.913)PS(0.075)EIS(0.012)PIK;RPES(0.963)PS(0.037)EISPIK;RPES(0.949)PS(0.051)EISPIK 117.48 0.0024412 52838000 116330 143963 134051 147249 141843 120984 143512 123020 122438 143928 TRUE FALSE 125236.3142 136814.0068 138520.1934 135218.2857 136273.5311 125588.1309 124668.702 139099.1364 133087.4359 139231.6411 0.899481707 0.982635884 0.994890187 0.971174975 0.978754039 0.902008551 0.89540496 0.999048314 0.955870626 1 17.08712758 -8.592584164 1.45507241 0.998103118 0.952406559 0.121891411 0.038067767 1.204457342 5.528458011 0.038472681 0.011373415 2.56E-09 8.592584164 -0.045696559 RPGAPSLS(ph)PAPR ddPTM_A459_MK2206_30min_R1 4 RPGAPSLSPAPR 12 1 Q5QP82;Q5QP82-2 Q5QP82;Q5QP82-2 DCAF10 DDB1- and CUL4-associated factor 10 1 RPGAPS(0.007)LS(0.993)PAPR;RPGAPS(0.02)LS(0.98)PAPR;RPGAPS(0.005)LS(0.995)PAPR;RPGAPS(0.013)LS(0.987)PAPR 88.311 0.014027 29242700 8376.9 9131.5 8799.7 7559.7 8809.2 8686.3 9301.7 8046.6 7562 6936.9 TRUE FALSE 7664.400666 8537.03769 8202.400881 8141.949404 8458.31091 9178.110799 8681.200565 7976.249425 8348.096961 7796.295543 0.983082366 1.095012066 1.052089526 1.044335654 1.084914093 1.177239979 1.113503268 1.023081973 1.070777386 1 12.92857307 -4.754870746 24.91815429 1.077438324 0.9830822 0.243676696 0.04728615 318.9587328 1209857.186 0.012324908 0.114239503 1.76E-05 4.754870746 -0.094356124 RPGAPSLS(ph)PAPR ddPTM_A459_MK2206_30min_R2 4 RPGAPSLSPAPR 12 1 Q5QP82;Q5QP82-2 Q5QP82;Q5QP82-2 DCAF10 DDB1- and CUL4-associated factor 10 1 RPGAPS(0.017)LS(0.983)PAPR;RPGAPS(0.007)LS(0.993)PAPR;RPGAPS(0.001)LS(0.999)PAPR;RPGAPS(0.06)LS(0.94)PAPR 100.41 0.0069172 49951100 76963 110134 84631 103374 103243 89837 100881 76532 82305 99492 TRUE FALSE 82855.34645 104664.9057 87452.5553 94928.01352 99189.16107 93255.80999 87635.20352 86534.99517 89463.74013 96245.58419 0.860874264 1.087477484 0.908639664 0.986310326 1.03058402 0.968935986 0.910537395 0.899106135 0.92953605 1 16.55443273 -7.149089116 5.582122143 0.926665463 0.979884713 0.075437596 0.063139518 0.46190354 19.73233599 0.023023201 0.017746777 7.09E-08 7.149089116 0.05321925 RPGGS(ph)SPLNAVPCEGPPGSEPPR ddPTM_A459_MK2206_30min_R2 2 RPGGSSPLNAVPCEGPPGSEPPR 23 1 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 RPGGS(0.5)S(0.5)PLNAVPCEGPPGSEPPR;RPGGS(0.5)S(0.5)PLNAVPCEGPPGSEPPR 117.57 5.52E-06 53188000 72418 66575 75703 86655 82556 84284 83633 68790 69573 86117 TRUE FALSE 77962.37776 63268.98231 78226.90024 79575.0093 79314.43663 87491.48668 72651.88664 77781.08919 75624.33378 83307.00934 0.935844155 0.759467694 0.939019428 0.955201848 0.952073988 1.050229595 0.872098125 0.933668005 0.907778762 1 16.34615027 -5.438732211 10.65524051 0.950597318 0.847724155 0.32324676 0.060189263 0.662330429 81.28519787 0.015214331 0.031686779 3.64E-06 5.438732211 -0.102873163 RPGGSS(ph)PLNAVPCEGPPGSEPPR ddPTM_A459_MK2206_30min_R1 1 RPGGSSPLNAVPCEGPPGSEPPR 23 1 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 RPGGS(0.359)S(0.641)PLNAVPCEGPPGSEPPR 109.4 8.66E-06 11951000 1457.2 2024 1583 1379.3 1580.2 1446 1684.9 1152.2 1502.6 1627.7 TRUE FALSE 1333.257488 1892.237232 1475.55037 1485.533925 1517.257288 1527.87127 1572.503395 1142.126437 1658.800647 1829.351765 0.72881417 1.03437582 0.806597396 0.812054824 0.829396138 0.835198183 0.859595965 0.624333963 0.906769643 1 10.8371168 RPGNSTVTSS(ph)PPVTPK ddPTM_A459_MK2206_30min_R2 2 RPGNSTVTSSPPVTPK 16 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 RPGNSTVT(0.007)S(0.133)S(0.86)PPVTPK;RPGNSTVT(0.002)S(0.211)S(0.787)PPVTPK 88.471 0.0071442 11923800 51965 63149 54056 65612 61300 53820 74225 56641 42943 63034 TRUE FALSE 55943.48035 60013.11249 55858.20006 60251.28972 58893.05399 55868.15781 64479.16834 64044.17318 46678.10452 60977.20574 0.917449064 0.984189284 0.916050504 0.988095289 0.965820806 0.916213807 1.057430683 1.050296949 0.765500878 1 15.89598242 -5.772206371 24.75431527 0.967493223 0.943725578 0.016234353 0.079343117 1073.705284 2468551.114 0.02203836 0.03305662 1.69E-06 5.772206371 -0.023767645 RPGQSFHVNSEVNSVLS(ph)PR ddPTM_A459_MK2206_30min_R1 2 RPGQSFHVNSEVNSVLSPR 19 1 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 1 RPGQSFHVNSEVNS(0.064)VLS(0.936)PR;RPGQSFHVNSEVNS(0.007)VLS(0.993)PR 155.31 1.85E-06 33633000 3552.2 1909.28 2399.6 1745.51 5391.5 5820.1 5395.3 4143.3 2561.1 2074.66 TRUE FALSE 3250.066737 1784.985525 2236.721838 1879.949483 5176.745138 6149.629032 5035.389381 4107.075565 2827.33551 2331.684544 1.393870687 0.765534742 0.959272919 0.80626236 2.220173888 2.637418963 2.159550011 1.761419904 1.212572051 1 11.1871569 -6.256499728 24.94091481 1.926589674 0.964259233 0.423347785 0.478587158 368.582482 1861017.315 0.148173022 0.185245709 5.54E-07 6.256499728 -0.962330441 RPGQSFHVNSEVNSVLS(ph)PR ddPTM_A459_MK2206_30min_R2 3 RPGQSFHVNSEVNSVLSPR 19 1 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 1 RPGQSFHVNSEVNS(0.112)VLS(0.888)PR;RPGQSFHVNSEVNS(0.005)VLS(0.995)PR;RPGQSFHVNSEVNS(0.347)VLS(0.653)PR 136.96 8.62E-05 57006000 21623.9 31662.3 23795.1 44447 42539 57217 45328 29960.1 48646 31199.6 TRUE FALSE 23279.44241 30089.99622 24588.41676 40815.53792 40868.70512 59394.43303 39376.37915 33875.98794 52877.14115 30181.55961 0.771313435 0.996966247 0.814683438 1.352333625 1.354095204 1.967904701 1.304650246 1.122406807 1.751968481 1 14.88137974 -5.824911018 4.648597585 1.436772122 0.872972417 0.462249116 0.269706048 0.178849635 7.585405959 0.076300124 0.118700411 1.50E-06 5.824911018 -0.563799705 RPGS(ph)VSSTDQER ddPTM_A459_MK2206_30min_R1 2 RPGSVSSTDQER 12 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 RPGS(0.997)VS(0.002)S(0.001)T(0.001)DQER;RPGS(0.737)VS(0.196)S(0.052)T(0.014)DQER 147.39 0.001133 14278900 5005.4 4689.7 5148.8 3721.8 5013.6 4004.9 3948.9 4281.1 2969.8 2991.5 TRUE FALSE 4579.664446 4384.399678 4799.313801 4008.453681 4813.897696 4231.653977 3685.476086 4243.670794 3278.521338 3362.109605 1.362140139 1.30406209 1.427470953 1.192243607 1.431808674 1.258630585 1.096179637 1.262204774 0.975138149 1 11.71515104 -7.736223806 0.73699559 0.988849853 1.348146072 0.665844063 0.089870147 0.394775972 0.411222696 0.078940299 0.038051869 1.84E-08 7.736223806 0.35929622 RPGT(ph)SPALLQGTAEEDHVDLSLSCTLVPR ddPTM_A459_MK2206_30min_R1 2 RPGTSPALLQGTAEEDHVDLSLSCTLVPR 29 1 P38936 P38936 CDKN1A Cyclin-dependent kinase inhibitor 1 1 RPGT(0.495)S(0.495)PALLQGT(0.01)AEEDHVDLSLSCTLVPR;RPGT(0.498)S(0.498)PALLQGT(0.004)AEEDHVDLSLSCTLVPR 62.069 0.0012004 10858100 1040.87 1206.1 1024.2 711.85 1090.81 1154.65 891.73 968.11 829.97 811.17 TRUE FALSE 952.3385407 1127.582671 954.6801576 766.6768103 1047.360728 1220.025285 832.2443188 959.6459163 916.2483516 911.6638636 1.044615871 1.23684037 1.04718438 0.840964352 1.148845281 1.338240259 0.912885058 1.052631298 1.005028704 1 9.832358181 RPGTQGHLGPEKEEEES(ph)DGEPEDSSTS ddPTM_A459_MK2206_30min_R1 1 RPGTQGHLGPEKEEEESDGEPEDSSTS 27 2 Q8IYB7;H7C1Q8 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 1 RPGTQGHLGPEKEEEES(0.406)DGEPEDS(0.406)S(0.151)T(0.02)S(0.018) 46.595 0.019389 12618000 1177.4 1407.1 1545.7 1345.9 1079.2 1037 1225.3 1295.4 1256.3 1109.9 TRUE FALSE 1077.255947 1315.497534 1440.782191 1449.561451 1036.213179 1095.714044 1143.562473 1284.074454 1386.896881 1247.402791 0.863599115 1.054589218 1.155025627 1.162063658 0.830696537 0.878396338 0.916754781 1.029398413 1.111827623 1 10.28471168 -4.75107132 24.6240598 1.012143497 0.863598741 0.152229673 0.107231263 836.0811513 1985523.372 0.029933368 0.406296461 1.77E-05 4.75107132 -0.148544757 RPGTQGHLGPEKEEEES(ph)DGEPEDSSTS ddPTM_A459_MK2206_30min_R2 1 RPGTQGHLGPEKEEEESDGEPEDSSTS 27 2 Q8IYB7;H7C1Q8 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 1 RPGTQGHLGPEKEEEES(0.952)DGEPEDS(0.03)S(0.013)T(0.002)S(0.002) 47.991 0.04762 13520000 7896.9 11606 8160.2 10857 11736 8635.5 11868 7998.9 8148.5 9284.5 TRUE FALSE 8501.492736 11029.66292 8432.256995 9969.94837 11275.18567 8964.130004 10309.71734 9044.383694 8857.241801 8981.547525 0.946550994 1.228035913 0.938842329 1.110047945 1.255372266 0.998060744 1.147877614 1.006996141 0.986159877 1 13.13274833 -7.877213199 7.28242431 0.99454189 1.092333884 0.14704971 0.101106737 0.414538999 24.54985453 0.053233855 0.025403016 1.33E-08 7.877213199 0.097791995 RPGTQGHLGPEKEEEESDGEPEDSS(ph)TS ddPTM_A459_MK2206_30min_R2 1 RPGTQGHLGPEKEEEESDGEPEDSSTS 27 2 Q8IYB7;H7C1Q8 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 1 RPGTQGHLGPEKEEEES(0.028)DGEPEDS(0.196)S(0.27)T(0.27)S(0.235) 49.608 0.037919 20084000 18754 20471 17856 21828 20028 14062 24664 16093 15241 22236 TRUE FALSE 20189.82066 19454.43991 18451.31013 20044.58258 19241.60009 14597.13926 21425.58717 18196.41036 16566.63463 21510.44114 0.938605607 0.904418453 0.857783902 0.931853626 0.894523732 0.678607155 0.99605522 0.845933853 0.770167126 1 14.39274949 -4.519109708 0.745068697 0.861016945 1.011041859 0.04554741 0.092188884 12.73448712 4.113064919 0.036113876 1.748178648 3.03E-05 4.519109708 0.150024914 RPHT(ph)PTPGIYMGR ddPTM_A459_MK2206_30min_R2 2 RPHTPTPGIYMGR 13 1 P62995;H7C2L4;P62995-3;H7BXF3 P62995 TRA2B Transformer-2 protein homolog beta 1 RPHT(0.581)PT(0.419)PGIYMGR;RPHT(0.969)PT(0.031)PGIYMGR 113.67 0.0024918 114148000 71287 66961 70186 73363 59325 67528 81630 67877 56165 80660 TRUE FALSE 76744.78753 63635.81411 72525.96621 67369.00822 56995.60242 70097.82536 70911.88294 76748.75696 61050.13018 78028.07081 0.983553569 0.815550269 0.929485574 0.863394513 0.730449976 0.898366763 0.908799644 0.983604441 0.7824124 1 16.25170561 -6.98596689 24.99381139 0.915372919 0.860227455 0.086586642 0.082700232 601.4013916 1071128.555 0.028515517 0.025137907 1.03E-07 6.98596689 -0.055145463 RPILQLS(ph)PPGPR ddPTM_A459_MK2206_30min_R1 1 RPILQLSPPGPR 12 1 Q8N3X1-2;Q8N3X1;F5GXL1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 RPILQLS(1)PPGPR 72.315 0.029572 163990000 2001.7 1877.1 1871.9 1866.1 2018 1730.3 1990 1754.9 1672.1 1654.1 TRUE FALSE 1831.444904 1754.900449 1744.840643 2009.827345 1937.618787 1828.268091 1857.250731 1739.557094 1845.920779 1859.022396 0.985165594 0.943991021 0.938579679 1.081120566 1.042278345 0.983456732 0.999046991 0.935737567 0.992952416 1 10.86032844 RPILQLS(ph)PPGPR ddPTM_A459_MK2206_30min_R2 3 RPILQLSPPGPR 12 1 Q8N3X1-2;Q8N3X1;F5GXL1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 RPILQLS(1)PPGPR;RPILQLS(1)PPGPR;RPILQLS(1)PPGPR 97.45 0.008312 171467200 20161.3 26413.9 23645.8 29155 26999.6 25655.8 29417.5 22859.5 21664.5 23340.8 TRUE FALSE 21704.86463 25102.22414 24434.13917 26772.94324 25939.46004 26632.14945 25554.94691 25847.31514 23548.83905 22579.19161 0.961277313 1.111741491 1.082152966 1.185735243 1.148821468 1.179499688 1.131791933 1.144740502 1.042944294 1 14.46270621 -4.332210731 1.660481384 1.126948311 0.615048075 0.378007128 0.056876745 3.730541869 3.654216233 0.014998891 4.439640369 4.65E-05 4.332210731 -0.511900237 RPIS(ph)DDDCPSASK ddPTM_A459_MK2206_30min_R1 2 RPISDDDCPSASK 13 1 Q96PU4 Q96PU4 UHRF2 E3 ubiquitin-protein ligase UHRF2 1 RPIS(0.94)DDDCPS(0.06)ASK;RPIS(0.904)DDDCPS(0.08)AS(0.016)K 142.4 0.0013964 20049900 3107.4 2962.1 2904.7 2798.9 3008 2658.59 2695.41 3060.9 2383.15 2295.62 TRUE FALSE 2843.099312 2769.266752 2707.537057 3014.471763 2888.18499 2809.117068 2515.604117 3034.138874 2630.886971 2580.018737 1.101968475 1.073351411 1.049425347 1.168391423 1.119443417 1.088797158 0.975033274 1.176014279 1.019716227 1 11.33316583 -8.499244071 23.74008367 0.999999945 1.091482726 0.279398298 0.054421997 428.8480394 430760.7128 0.051819946 0.013379852 3.17E-09 8.499244071 0.091482781 RPIS(ph)DDDCPSASK ddPTM_A459_MK2206_30min_R2 2 RPISDDDCPSASK 13 1 Q96PU4 Q96PU4 UHRF2 E3 ubiquitin-protein ligase UHRF2 1 RPIS(0.999)DDDCPSASK;RPIS(1)DDDCPSASK 84.436 0.014962 78569000 188495 260440 226630 243280 223171 187029 236380 226398 209009 235210 TRUE FALSE 202926.3221 247506.9283 234185.7311 223403.2458 214408.1852 194146.5197 205343.0221 255988.9959 227188.225 227535.117 0.891846168 1.087774633 1.029228957 0.981840732 0.942308106 0.853259586 0.902467385 1.125052692 0.998475436 1 17.7957297 -7.75273746 24.99990496 1.046323057 0.960022649 0.226351801 0.072036457 296.9552815 853134.075 0.037290256 0.021107586 1.77E-08 7.75273746 -0.086300408 RPISADSAIMNPASK ddPTM_A459_MK2206_30min_R2 1 RPISADSAIMNPASK 15 1 A0A087WVQ6;Q00610-2;Q00610;J3KS13;J3QL20;J3KSQ2 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 101.2 0.015369 0 28423 31249 26967 29712 31022 26301 33423 18798 29346 30835 FALSE TRUE 30599.08673 29697.2201 27866.06632 27284.43456 29803.92041 27301.90298 29034.51995 21254.96314 31898.46203 29828.85648 1.025821649 0.995586945 0.934198277 0.914699314 0.999164029 0.915284936 0.973370199 0.712563794 1.069382665 1 14.86442105 -5.142723912 2.741547831 0.930608253 1.023289652 0.089957848 0.088702462 0.624005967 8.655278274 0.022616188 0.087903308 7.20E-06 5.142723912 0.092681398 RPISDDDCPS(ph)ASK ddPTM_A459_MK2206_30min_R1 2 RPISDDDCPSASK 13 1 Q96PU4 Q96PU4 UHRF2 E3 ubiquitin-protein ligase UHRF2 1 RPIS(0.384)DDDCPS(0.61)AS(0.007)K;RPIS(0.096)DDDCPS(0.895)AS(0.009)K 121.42 0.0051088 19229100 5185.3 5579.3 6219.9 5038.5 5568.4 5087.2 5294.1 4978.2 4763.7 4599.6 TRUE FALSE 4744.263006 5216.086556 5797.710518 5426.566143 5346.598837 5375.232868 4940.940249 4934.676122 5258.903662 5169.433173 0.917753039 1.009024855 1.121536989 1.049741038 1.034271777 1.039810882 0.95579923 0.954587468 1.017307601 1 12.33579038 -7.250925263 24.30596876 0.978139197 1.033226839 0.167988814 0.050101492 822.2471676 1900829.863 0.020414506 0.015623094 5.61E-08 7.250925263 0.055087642 RPISDDDCPS(ph)ASK ddPTM_A459_MK2206_30min_R2 2 RPISDDDCPSASK 13 1 Q96PU4 Q96PU4 UHRF2 E3 ubiquitin-protein ligase UHRF2 1 RPIS(0.116)DDDCPS(0.606)AS(0.278)K;RPIS(0.101)DDDCPS(0.887)AS(0.012)K 125.5 0.003811 19006400 38025 42730 37129 47160 43613 39055 47821 37097 40136 43894 TRUE FALSE 40936.22324 40608.09034 38366.86233 43306.87714 41900.53448 40541.26539 41542.04526 41945.70527 43626.95673 42461.74237 0.964073091 0.956345361 0.903563071 1.019903441 0.986783211 0.954771593 0.97834057 0.987847011 1.027441511 1 15.37387595 -6.73132835 0.41480715 1.009099891 0.943612758 0.29941296 0.028509767 1.926039242 0.683194777 0.030259916 0.050430785 1.86E-07 6.73132835 -0.065487133 RPLDS(ph)PEAEELPAMK ddPTM_A459_MK2206_30min_R1 1 RPLDSPEAEELPAMK 15 1 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 RPLDS(1)PEAEELPAMK 136.81 0.0002075 20526000 5595.8 5493.1 5400.6 5151 5717.3 5055.4 5327.2 5167.5 4815.1 4246.2 TRUE FALSE 5119.847825 5135.498192 5034.022319 5547.730913 5489.567834 5341.632379 4971.832208 5122.321092 5315.646876 4772.251313 1.072837009 1.07611646 1.054852729 1.162497645 1.15030988 1.119310788 1.04182112 1.073355269 1.113865664 1 12.2204543 -10.65896975 6.569154863 0.999999797 1.096269517 0.367493941 0.037825017 1.24E-07 1.63E-08 0.040298345 0.009773764 2.19E-11 10.65896975 0.09626972 RPLDS(ph)PEAEELPAMK ddPTM_A459_MK2206_30min_R2 4 RPLDSPEAEELPAMK 15 1 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK 100.01 0.0040394 30411200 194671 220856 192731 232762 202468 208290 253462 187819 168383 221873 TRUE FALSE 209575.1614 209888.6122 199156.5553 213744.6 194518.089 216216.6219 220182.1349 212367.5882 183028.649 214633.3022 0.97643357 0.977893971 0.927892146 0.99585944 0.906281025 1.00737686 1.025852618 0.989443791 0.852750468 1 17.71151441 RPLEAGS(ph)PGQDLEPACDGAR ddPTM_A459_MK2206_30min_R2 1 RPLEAGSPGQDLEPACDGAR 20 1 Q9HCM7;A0A3B3IRR3;A0A1B0GUN3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 RPLEAGS(1)PGQDLEPACDGAR 84.291 0.0013259 11287000 14109 18675 12630 19337 23651 20808 17858 16754 16254 14682 TRUE FALSE 15189.19589 17747.62666 13051.0779 17757.10524 22722.3429 21599.86302 15513.22315 18943.80533 17667.74354 14202.92754 1.069441201 1.249575244 0.918900548 1.250242613 1.599835163 1.520803578 1.092255319 1.333795816 1.243950832 1 13.79390071 -5.986955179 24.08268019 1.32585703 1.09437232 0.21381302 0.183328186 217.4106253 401366.4913 0.052226735 0.07740583 1.03E-06 5.986955179 -0.231484711 RPLEDGDQPDAK ddPTM_A459_MK2206_30min_R2 1 RPLEDGDQPDAK 12 1 Q96AE4;E9PEB5;Q96AE4-2 Q96AE4 FUBP1 Far upstream element-binding protein 1 0 132.79 0.0024809 3988000 34945 37564 44497 47037 39779 41254 46410 40910 39374 50999 FALSE TRUE 37620.41607 35698.62638 45980.50777 43193.92664 38217.07659 42823.94988 40316.31125 46257.07747 42798.67935 49334.90681 0.76255168 0.723597726 0.932007594 0.875524642 0.774645764 0.868025353 0.817196461 0.937613557 0.867513129 1 15.59032116 -14.52284958 0.024662356 2.167778325 2.81E-13 0.500530834 0.058372457 1895.889864 3.518454877 223.4041495 105.9805561 3.00E-15 14.52284958 -2.167778325 RPLEEDFRRS(ph)PTEDFR ddPTM_A459_MK2206_30min_R1 1 RPLEEDFRRSPTEDFR 16 3 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 RPLEEDFRRS(0.923)PT(0.077)EDFR 67.93 0.03464 72457000 2915.3 2987.5 2998.4 3165.3 3894.1 2814.9 2444.9 3286.1 1641.3 956.42 TRUE FALSE 2667.338426 2793.013207 2794.876962 3409.091954 3738.989751 2974.277205 2281.805182 3257.369974 1811.919008 1074.90853 2.48145619 2.598372911 2.600106784 3.171518188 3.478425974 2.767004933 2.122790096 3.030369452 1.685649483 1 10.06999818 -8.451938024 3.286339246 1.006624492 2.782917912 0.727062454 0.363304867 0.121327849 2.642135962 0.377015967 0.100246639 3.53E-09 8.451938024 1.77629342 RPLEEDFRRSPT(ph)EDFR ddPTM_A459_MK2206_30min_R2 1 RPLEEDFRRSPTEDFR 16 3 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 RPLEEDFRRS(0.391)PT(0.609)EDFR 65.219 0.028005 31077000 9931.9 31744 21437 20814 31677 37906 23472 14125 31521 15377 TRUE FALSE 10692.2939 30167.63912 22151.69888 19113.42962 30433.20182 39348.53939 20390.09821 15971.186 34262.6396 14875.24975 0.718797605 2.028042529 1.489164838 1.284914871 2.045895184 2.645235546 1.37073989 1.073675149 2.303332057 1 13.86062627 -6.247470274 24.54696092 1.770314219 1.434283365 0.082625523 0.570410615 1906.420821 3350020.698 0.170672418 0.219176263 5.66E-07 6.247470274 -0.336030853 RPLPGPS(ph)PPR ddPTM_A459_MK2206_30min_R2 1 RPLPGPSPPR 10 1 O14924-5;O14924-4;O14924;E9PBG5 O14924-5 RGS12 Regulator of G-protein signaling 12 1 RPLPGPS(1)PPR 81.278 0.023357 3236200 7103.6 9006.7 8064.8 7763.6 9010.1 8225.4 6781.2 5356.5 8096 7422.6 TRUE FALSE 7647.457078 8559.440375 8333.676407 7129.289045 8656.318202 8538.423361 5890.820294 6056.612942 8800.175446 7180.40117 1.065045935 1.192056011 1.160614318 0.992881717 1.205547991 1.189129014 0.82040267 0.843492278 1.225582699 1 12.80984873 -7.243097963 24.90688296 0.959327087 1.134860231 0.30428054 0.119236102 917.9815588 1246582.689 0.045619822 0.035270404 5.71E-08 7.243097963 0.175533143 RPLPVES(ph)PDTQR ddPTM_A459_MK2206_30min_R2 1 RPLPVESPDTQR 12 1 P57682 P57682 KLF3 Krueppel-like factor 3 1 RPLPVES(0.994)PDT(0.006)QR 73.722 0.027398 13176000 91769 76019 73533 88472 98119 82703 105330 95070 73371 87859 TRUE FALSE 98794.9052 72244.007 75984.55352 81243.55459 94266.35505 85850.32062 91500.04448 107495.9754 79752.67696 84992.16803 1.162400107 0.850007815 0.894018299 0.955894602 1.109118137 1.010096843 1.076570308 1.264775072 0.938353248 1 16.37504228 -6.250143357 22.34305118 1.077409149 0.952213418 0.15650034 0.111353705 272.4675462 538925.4525 0.032331548 0.04124805 5.62E-07 6.250143357 -0.125195731 RPLS(ph)GPDVGTPQPAGLASGAK ddPTM_A459_MK2206_30min_R1 2 RPLSGPDVGTPQPAGLASGAK 21 1 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RPLS(0.893)GPDVGT(0.107)PQPAGLASGAK;RPLS(1)GPDVGTPQPAGLASGAK 120.44 0.00013269 55166000 6281.4 7655 8604.3 7996 8204.1 7038.5 7440.9 6469 7147.2 8167.8 TRUE FALSE 5747.133945 7156.658109 8020.264089 8611.853305 7877.313325 7437.013787 6944.531138 6412.442215 7890.177017 9179.688728 0.626070678 0.779618822 0.873696737 0.938142192 0.85812423 0.810159691 0.756510525 0.698546803 0.859525552 1 13.16422952 -4.812694954 3.084810535 0.837052679 0.601126885 0.40521474 0.081024138 0.371301056 5.461838026 0.02176331 0.208496901 1.54E-05 4.812694954 -0.235925794 RPLS(ph)GPDVGTPQPAGLASGAK ddPTM_A459_MK2206_30min_R2 4 RPLSGPDVGTPQPAGLASGAK 21 1 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RPLS(0.859)GPDVGT(0.14)PQPAGLAS(0.001)GAK;RPLS(0.999)GPDVGT(0.001)PQPAGLASGAK;RPLS(0.993)GPDVGT(0.007)PQPAGLASGAK;RPLS(1)GPDVGTPQPAGLASGAK 155.11 4.42E-07 131864500 206260 219540 235571 222112 234274 218350 260518 183301 200060 210805 TRUE FALSE 222051.4242 208637.9628 243424.8196 203964.7391 225075.2256 226659.4623 226311.6737 207259.0701 217460.8572 203926.4501 1.088879957 1.023103981 1.193689291 1.000187759 1.103707859 1.111476526 1.109771065 1.016342264 1.066369061 1 17.63768939 -7.764838211 24.97427008 1.031016738 1.08940826 0.233999016 0.05173458 137.1376724 1007636.048 0.025757332 0.013155426 1.72E-08 7.764838211 0.058391521 RPLS(ph)SSHEASEGQAK ddPTM_A459_MK2206_30min_R1 2 RPLSSSHEASEGQAK 15 1 A0A0J9YVR0;Q8IZ21-3;Q8IZ21;Q8IZ21-2 A0A0J9YVR0;Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 RPLS(0.796)S(0.164)S(0.035)HEAS(0.005)EGQAK;RPLS(0.713)S(0.224)S(0.063)HEASEGQAK 79.635 0.015764 37610500 9700.6 7478.4 8610.4 7314.5 9986.6 9664.4 9426.8 8713.8 6969.1 6209.9 TRUE FALSE 8875.51303 6991.554801 8025.950038 7877.864057 9588.812575 10211.58998 8797.955372 8637.616165 7693.562884 6979.229294 1.271703888 1.001766027 1.149976552 1.128758452 1.373907085 1.463140061 1.260591249 1.237617479 1.102351357 1 12.76885202 -3.691097999 13.50774688 1.210699815 45.1079358 0 0.144043998 0 0 0.034906349 0 0.000203658 3.691097999 43.89723599 RPLS(ph)SSHEASEGQAK ddPTM_A459_MK2206_30min_R2 4 RPLSSSHEASEGQAK 15 1 A0A0J9YVR0;Q8IZ21-3;Q8IZ21;Q8IZ21-2 A0A0J9YVR0;Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 RPLS(0.531)S(0.371)S(0.097)HEAS(0.001)EGQAK;RPLS(0.421)S(0.421)S(0.158)HEASEGQAK;RPLS(0.996)S(0.003)S(0.001)HEASEGQAK;RPLS(0.487)S(0.487)S(0.025)HEASEGQAK 106.14 0.0023402 86998100 96848.5 143953.5 123373.3 162662.8 167440.8 176185.1 184937.7 119625.8 149483.7 128174.1 TRUE FALSE 104263.2956 136804.9785 127486.5042 149372.7289 160866.2329 182889.9474 160655.1578 135261.3028 162485.522 123991.7896 0.840888707 1.103339011 1.028185049 1.204698548 1.297394234 1.475016596 1.295691903 1.090889189 1.310453882 1 16.91988507 -5.18585703 1.05754919 1.259934183 0.831726875 0.437922143 0.132794699 0.96046367 1.364672475 0.045970922 0.398050339 6.52E-06 5.18585703 -0.428207308 RPLT(ph)PFHHR ddPTM_A459_MK2206_30min_R2 1 RPLTPFHHR 9 1 Q9UHV7;J3QRB7 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 1 RPLT(1)PFHHR 70.488 0.040651 2613200 3060 4858.8 3899.2 3745.6 4506.2 4668.3 5087.3 2506.1 3774.8 3515.6 TRUE FALSE 3294.275953 4617.519057 4029.197382 3439.572498 4329.263946 4845.955428 4419.331399 2833.655875 4103.125281 3400.88626 0.968652199 1.357739926 1.184749231 1.01137534 1.272981104 1.424909585 1.299464628 0.83321101 1.206487065 1 11.73169504 -7.742039591 24.99928452 1.014886647 1.223514287 0.259568753 0.157540743 315.3605828 406386.331 0.074691165 0.043041152 1.81E-08 7.742039591 0.20862764 RPMEEDGEEKS(ph)PSK ddPTM_A459_MK2206_30min_R1 6 RPMEEDGEEKSPSK 14 2 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 RPMEEDGEEKS(0.777)PS(0.223)K;RPMEEDGEEKS(0.746)PS(0.254)K;RPMEEDGEEKS(0.967)PS(0.033)K;RPMEEDGEEKS(0.783)PS(0.217)K;RPMEEDGEEKS(0.999)PS(0.001)K;RPMEEDGEEKS(0.995)PS(0.005)K 125.67 0.0079512 920459300 26077.8 35503.1 34979.3 32103.8 18155.33 16221.18 21679.02 24758.2 30094.5 28459.7 TRUE FALSE 23859.74617 33191.84174 32605.00257 34576.44024 17432.16476 17139.60919 20232.85213 24541.74167 33222.93097 31985.5025 0.745955021 1.037715188 1.019368152 1.081003503 0.54500206 0.535855555 0.63256321 0.76727704 1.038687167 1 14.96513053 -6.250432248 24.95498174 0.724692541 0.97922921 0.252069085 0.179566922 925.148942 2097464.157 0.055245506 0.070621424 5.62E-07 6.250432248 0.254536669 RPMEEDGEEKS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 RPMEEDGEEKSPSK 14 2 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 RPMEEDGEEKS(0.991)PS(0.009)K 175.27 0.0023025 10243000 53600 53025 55041 41352 46846 29091 58506 45148 33562 59946 TRUE FALSE 57703.65721 50391.85561 56876.03947 37973.40932 45006.59066 30198.07839 50824.09192 51048.99862 36481.16209 57989.96693 0.995062771 0.868975415 0.980791031 0.654827228 0.776109956 0.520746605 0.876429055 0.880307428 0.629094377 1 15.8235157 -5.750437376 24.9950095 0.752755704 0.940346347 0.282759866 0.134786334 274.7156535 624109.7144 0.03573919 0.061153729 1.78E-06 5.750437376 0.187590643 RPMEFEAALLSPGS(ph)PK ddPTM_A459_MK2206_30min_R2 2 RPMEFEAALLSPGSPK 16 1 B4DQP0;Q9H9L7-2;Q9H9L7 B4DQP0 AKIRIN1 Akirin-1 1 RPMEFEAALLS(0.005)PGS(0.995)PK;RPMEFEAALLSPGS(1)PK 90.765 0.0062166 8882500 76533 63562 66974 56139 64201 57136 80428 65557 53785 82832 TRUE FALSE 82392.42532 60405.60351 69206.87973 51552.26412 61680.14616 59310.35052 69867.70699 74125.52499 58463.12208 80129.19862 1.028244719 0.753852585 0.86369115 0.643364279 0.76975868 0.740183997 0.871938172 0.925075082 0.729610717 1 16.29004043 -10.88795599 9.545336275 1.000000165 0.810147709 0.21769301 0.105573587 3.67E-07 2.44E-08 0.101102835 0.024521018 1.29E-11 10.88795599 -0.189852457 RPMS(ph)SPEMK ddPTM_A459_MK2206_30min_R1 2 RPMSSPEMK 9 1 P51610;A6NEM2;P51610-2;P51610-4;H7C1C4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 RPMS(0.5)S(0.5)PEMK;RPMS(0.65)S(0.35)PEMK 98.105 0.035909 37741000 9655.9 9785.9 10602.2 8455.7 8537.4 7214.4 7959.1 8619.4 7735.1 7446.7 TRUE FALSE 8834.615 9148.836131 9882.552203 9106.959479 8197.33728 7622.873093 7428.162961 8544.041495 8539.191325 8369.253416 1.055603715 1.093148418 1.180816461 1.088144787 0.979458606 0.910818769 0.887553835 1.020884548 1.020305026 1 13.03088322 -6.249027982 4.024065045 0.962562382 1.111442377 0.636794318 0.049877998 0.144915075 5.552674957 0.016793248 0.02088744 5.64E-07 6.249027982 0.148879995 RPMS(ph)SPEMK ddPTM_A459_MK2206_30min_R2 1 RPMSSPEMK 9 1 P51610;A6NEM2;P51610-2;P51610-4;H7C1C4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 RPMS(0.875)S(0.125)PEMK 65.695 0.0449 20520000 53974 45681 53697 55685 49924 48798 58502 39542 41589 67232 TRUE FALSE 58106.29094 43412.54797 55487.23118 51135.35737 47963.73291 50655.04208 50820.61713 44710.27517 45206.33604 65038.22535 0.893417535 0.667492813 0.853147989 0.786235435 0.73746989 0.778850312 0.781396123 0.687446112 0.695073333 1 15.98900027 -10.91738467 5.935103441 1.000060468 0.762753744 0.518271156 0.06809403 5.24E-05 5.34E-06 0.063355835 0.015362142 1.21E-11 10.91738467 -0.237306724 RPMSS(ph)PEMK ddPTM_A459_MK2206_30min_R1 2 RPMSSPEMK 9 1 P51610;A6NEM2;P51610-2;P51610-4;H7C1C4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 RPMS(0.424)S(0.576)PEMK;RPMS(0.317)S(0.683)PEMK 115 0.014913 35822000 10169.5 10711.1 10899.5 8937.6 8474.6 7691.2 9186.6 9130.5 8842.7 7973.7 TRUE FALSE 9304.530623 10013.80544 10159.67231 9625.975501 8137.038737 8126.669097 8573.778676 9050.673001 9761.930309 8961.542154 1.038273376 1.117419889 1.133696872 1.074142746 0.907995365 0.906838238 0.956730273 1.009945927 1.089313663 1 13.12953131 -6.102519192 6.200384284 0.97468095 1.099405569 0.507149948 0.054480676 0.201691881 10.28981178 0.017607114 0.022937858 7.90E-07 6.102519192 0.124724619 RPNEDS(ph)DEDEEK ddPTM_A459_MK2206_30min_R1 2 RPNEDSDEDEEK 12 1 H0YE74;E9PLP8;Q12996 H0YE74 CSTF3 Cleavage stimulation factor subunit 3 1 RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK 182.57 0.00018715 8299900 2705.5 3374.7 3128.3 2212.2 1609.38 1565.11 2622.9 2215 1065 3952.4 TRUE FALSE 2475.383018 3155.006417 2915.959712 2382.584027 1545.274987 1653.725176 2447.931127 2195.634489 1175.710561 4442.053151 0.557261008 0.710258592 0.656444129 0.536369995 0.347874043 0.372288471 0.551081008 0.494283705 0.264677283 1 12.11701094 -12.96499693 12.06190609 0.95836724 0.531672394 0 0.199928656 0 0 0 0.044674211 1.08E-13 12.96499693 -0.426694846 RPNEDS(ph)DEDEEKGAVVPPVHDIYR ddPTM_A459_MK2206_30min_R1 3 RPNEDSDEDEEKGAVVPPVHDIYR 24 2 H0YE74;E9PLP8;Q12996 H0YE74 CSTF3 Cleavage stimulation factor subunit 3 1 RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR 62.765 0.0019365 72006000 12565.95 14820.78 14506.72 13936.26 11426.05 9705.67 10915.99 12579.23 11941.26 9927.03 TRUE FALSE 11497.14997 13855.94453 13522.04426 15009.63316 10970.92623 10255.19665 10187.80422 12469.25112 13182.59671 11156.86542 1.030500013 1.241920916 1.211993132 1.345327078 0.983334101 0.919182607 0.913142163 1.117630324 1.181568139 1 13.44564413 -6.282093149 24.84701286 1.014726342 1.210224113 0.43430876 0.105184172 745.0363669 896295.3781 0.03483307 0.039542293 5.22E-07 6.282093149 0.195497771 RPNEDS(ph)DEDEEKGAVVPPVHDIYR ddPTM_A459_MK2206_30min_R2 5 RPNEDSDEDEEKGAVVPPVHDIYR 24 2 H0YE74;E9PLP8;Q12996 H0YE74 CSTF3 Cleavage stimulation factor subunit 3 1 RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR 78.057 0.00012976 266820000 237074 297809 281315 263369 297108 217537 314110 226434 238730 316674 TRUE FALSE 255224.5677 283020.2381 290693.9017 241850.9102 285442.0471 225815.523 272866.9797 256029.7013 259494.3039 306340.9533 0.833138909 0.923873335 0.948922756 0.789482789 0.931778934 0.737137887 0.890729681 0.835767136 0.847076766 1 18.22477872 -1.523079427 12.01986143 0.868650476 7.17E-05 0 0.075887738 0 0 0.016338989 0 0.029986141 1.523079427 -0.868578818 RPNPDILDHER ddPTM_A459_MK2206_30min_R1 1 RPNPDILDHER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L0N7 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 96.334 0.013721 2960000 1798.5 2101.2 2205.2 1955.7 1790.5 1920 1823.5 1806.8 1922.6 1513 FALSE TRUE 1645.528131 1964.411498 2055.517168 2106.328353 1719.180594 2028.708741 1701.857642 1791.003338 2122.46115 1700.441863 0.967706199 1.155235907 1.208813552 1.238694718 1.011019919 1.193047987 1.000832595 1.053257614 1.248182132 1 10.73169397 -6.269222147 24.91572489 1.088307954 1.1482429 0.070943917 0.101821006 1683.604712 5389866.479 0.031404562 0.036250111 5.38E-07 6.269222147 0.059934946 RPNPDILDHER ddPTM_A459_MK2206_30min_R2 1 RPNPDILDHER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L0N7 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 149.94 0.00041991 1121500 4189.9 6261.1 4681.8 6318.8 6712.5 7876.7 4552.9 4750.7 7144.9 6058.2 FALSE TRUE 4510.681965 5950.182878 4837.888875 5802.533827 6448.933522 8176.453338 3955.098761 5371.632802 7766.350487 5860.52143 0.769672463 1.015299227 0.825504852 0.990105385 1.100402686 1.39517506 0.674871478 0.916579329 1.325197865 1 12.51681332 -5.965801683 5.042702709 1.060283451 0.8857891 0.165804232 0.19768767 0.404868017 25.70500073 0.058418914 0.086203118 1.08E-06 5.965801683 -0.174494352 RPPEEDWR ddPTM_A459_MK2206_30min_R1 2 RPPEEDWR 8 1 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 0 ; 106.68 0.016472 3148700 1624.13 1856.67 1829.77 1673.03 2202.6 1598.73 1833.16 2053.54 1482.09 1378.18 FALSE TRUE 1485.989215 1735.800446 1705.57031 1801.88706 2114.865778 1689.248711 1710.873241 2035.586116 1636.158559 1548.919343 0.959371591 1.120652572 1.101135652 1.163318845 1.365381475 1.090598241 1.104559284 1.314197621 1.056322633 1 10.59704631 -4.247035295 1.187132381 1.168282864 0.520926096 0.210068127 0.107003551 6.734336291 3.349018694 0.031231392 7.34163192 5.66E-05 4.247035295 -0.647356768 RPPEEDWR ddPTM_A459_MK2206_30min_R2 1 RPPEEDWR 8 1 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 0 101.25 0.023248 2150300 8290.8 10988 8062.2 11388 10264 10462 8672.2 11559 8680.6 10197 FALSE TRUE 8925.550023 10442.3519 8330.989724 10457.56397 9860.983788 10860.13874 7533.529723 13069.80099 9435.622897 9864.272725 0.904836096 1.058603324 0.844561982 1.060145463 0.999666581 1.100956862 0.763718718 1.324963467 0.956545217 1 13.26799697 -6.263025581 0.629703943 1.050272449 0.94393545 0.045621308 0.14283143 3.090199847 2.578981875 0.094604525 0.182325068 5.46E-07 6.263025581 -0.106336999 RPPES(ph)PPIVEEWNSR ddPTM_A459_MK2206_30min_R1 3 RPPESPPIVEEWNSR 15 1 A0A3B3IU46;Q9BTL3 A0A3B3IU46 FAM103A1 RNMT-activating mini protein 1 RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR 156.08 8.54E-05 17283000 2419.88 2377.12 2650.45 2089.96 2898.89 2680.54 2854.84 2317.46 1929.72 1814.15 TRUE FALSE 2214.056499 2222.369056 2470.544839 2250.929081 2783.421073 2832.309858 2664.398833 2297.198692 2130.3213 2038.900598 1.085907033 1.089984013 1.211704406 1.103991574 1.365157809 1.389135822 1.306782113 1.126684986 1.044838234 1 10.99357573 -8.093818696 3.11980016 1.021077436 1.223564225 0.369418455 0.103771143 0.326992739 5.787553021 0.094016814 0.031368795 8.06E-09 8.093818696 0.202486788 RPPES(ph)PPIVEEWNSR ddPTM_A459_MK2206_30min_R2 4 RPPESPPIVEEWNSR 15 1 A0A3B3IU46;Q9BTL3 A0A3B3IU46 FAM103A1 RNMT-activating mini protein 1 RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR 122.16 0.00081691 66011000 26360.5 25097.1 24310.9 26151.8 22278.5 20577.7 25090.3 24095.7 23595.9 24441.3 TRUE FALSE 28378.68015 23850.81451 25121.41327 24015.11428 21403.73415 21360.79879 21795.91347 27245.09072 25648.22873 23643.78238 1.200259742 1.008756303 1.062495538 1.015705266 0.905258465 0.903442539 0.921845461 1.152315238 1.08477689 1 14.52917323 -1.755639606 9.681195828 1.020399172 1.178932376 0 0.096380005 0 0 0.023496586 0 0.017553365 1.755639606 0.158533204 RPPGGT(ph)SPPNGGLPGPLATSAAPPGPPAAASPCLGPVAAAGSGLR ddPTM_A459_MK2206_30min_R2 1 RPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVAAAGSGLR 45 1 H3BUF6;Q8WWM7-7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 RPPGGT(0.497)S(0.497)PPNGGLPGPLAT(0.003)S(0.003)AAPPGPPAAASPCLGPVAAAGSGLR 64.775 1.83E-09 11353000 33937 40287 38011 49637 37767 49522 38452 33159 36767 36793 TRUE FALSE 36535.24281 38286.40616 39278.26777 45581.49832 36284.07782 51406.59441 33403.20621 37492.99515 39964.9272 35592.44742 1.026488636 1.075689056 1.103556249 1.280650858 1.019431943 1.444311873 0.938491411 1.0533975 1.122848528 1 15.11928352 RPPGPDLS(ph)PDGPR ddPTM_A459_MK2206_30min_R2 2 RPPGPDLSPDGPR 13 1 H0Y9P2;J3KPQ0;P22455-3;P22455-2;P22455 H0Y9P2 FGFR4 Receptor protein-tyrosine kinase;Fibroblast growth factor receptor 4 1 RPPGPDLS(1)PDGPR;RPPGPDLS(1)PDGPR 93.106 0.031531 15195400 47843 48391 47584 68842 46609 59544 54282 41733 55289 55689 TRUE FALSE 51505.89687 45987.97331 49170.42681 63217.38839 44778.89647 61809.98864 47154.7082 47187.64639 60097.93728 53871.87249 0.95608143 0.853654629 0.912729121 1.173476723 0.831211064 1.147351777 0.875312218 0.875923635 1.115571717 1 15.71724459 -5.554577834 24.99878683 0.995097916 0.899448482 0.125030613 0.114128259 382.6031229 301729.7651 0.029628256 0.051318134 2.79E-06 5.554577834 -0.095649434 RPPGPTTS(ph)PASTSLSSPGQR ddPTM_A459_MK2206_30min_R1 1 RPPGPTTSPASTSLSSPGQR 20 1 Q01970-2;Q01970 Q01970-2 PLCB3 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3" 1 RPPGPT(0.124)T(0.221)S(0.648)PAS(0.003)T(0.002)SLSSPGQR 101.23 0.0012799 2541100 964.57 637.3 838.76 702.26 798.94 831.65 921.47 727.48 790.96 667.21 TRUE FALSE 882.5282563 595.8116542 781.8273081 756.3481869 767.116528 878.7373043 860.0004176 721.1197191 873.1831225 749.869012 1.17690989 0.794554308 1.042618505 1.008640409 1.023000705 1.171854404 1.146867525 0.961660913 1.164447535 1 9.550494796 -6.539549119 24.11110964 1.090993073 0.996061437 0.120004601 0.107563791 303.3855225 438795.7822 0.034054179 0.034064271 2.89E-07 6.539549119 -0.094931636 RPPRATS(ph)ACAPIS(ph)SPKT(ph)NGLS(ph)K ddPTM_A459_MK2206_30min_R1 1 RPPRATSACAPISSPKTNGLSK 22 3 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211 E7EUN2 AGAP1 "Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1" 4 RPPRAT(0.115)S(0.847)ACAPIS(0.56)S(0.56)PKT(0.956)NGLS(0.962)K 47.047 0.040128 1942900 309.4 174.89 49.05 127.01 142.46 0 248.29 184.31 0 0 TRUE FALSE 283.0839053 163.5046292 45.72062266 136.7923322 136.7855165 0 231.7270271 182.6985971 0 0 0 RPPS(ph)PDVIVLS(ph)DNEQPSSPR ddPTM_A459_MK2206_30min_R1 1 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 2 RPPS(1)PDVIVLS(0.86)DNEQPS(0.076)S(0.065)PR 83.312 0.0072501 2611300 743.11 730.66 642.3 399.26 654.13 613.82 724.35 613.58 639.21 696.6 TRUE FALSE 679.9045923 683.0939012 598.7024656 430.0110744 628.074617 648.5739579 676.0299332 608.2155347 705.6581669 782.9000671 0.868443651 0.872517362 0.764723993 0.549254103 0.802241108 0.828424962 0.86349454 0.776875058 0.901338749 1 9.612684357 -8.60994256 0.736585791 1.001570757 0.775853671 0.362088066 0.08913328 0.999797397 1.19920702 0.096574643 0.036499196 2.46E-09 8.60994256 -0.225717085 RPPS(ph)PDVIVLS(ph)DNEQPSSPR ddPTM_A459_MK2206_30min_R2 2 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 2 RPPS(1)PDVIVLS(0.652)DNEQPS(0.165)S(0.183)PR;RPPS(1)PDVIVLS(0.407)DNEQPS(0.275)S(0.318)PR 76.606 0.016081 3250900 11558.4 16196 15781.9 17686.4 17796.7 16129.4 18254.5 13353 16444 16144.7 TRUE FALSE 12443.31999 15391.73019 16308.06067 16241.36454 17097.91214 16743.21562 15857.66222 15098.28295 17874.2694 15617.89976 0.796734528 0.985518567 1.044190379 1.039919886 1.094763854 1.072052957 1.015351774 0.966729405 1.144473308 1 13.93091284 -4.697196386 2.062282576 1.047594819 0.686131902 0.718998128 0.047088648 0.493344232 1.934740463 0.012366986 0.364063009 2.01E-05 4.697196386 -0.361462917 RPPS(ph)PDVIVLSDNEQPSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 2 RPPS(1)PDVIVLS(0.008)DNEQPS(0.455)S(0.537)PR 91.1 0.0046363 0 6185 3738 4735.6 4756.3 4723.1 5539 6746.5 5549.1 4226.8 5861.5 TRUE FALSE 6658.528355 3552.376356 4893.48254 4367.695075 4537.647362 5749.790526 5860.676446 6274.386423 4594.439424 5670.239735 1.174293975 0.626494914 0.863011578 0.770284023 0.800256704 1.014029529 1.033585301 1.106546939 0.810272517 1 12.46919402 -6.765366058 24.7972682 1.002089722 0.831267441 0.194372619 0.146332289 129.6929606 819013.8193 0.048136256 0.04403944 1.72E-07 6.765366058 -0.170822281 RPPS(ph)PDVIVLSDNEQPSSPR ddPTM_A459_MK2206_30min_R2 1 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 RPPS(1)PDVIVLSDNEQPSSPR 110.64 0.00019029 7902600 7566.8 8224.9 11096 10614 8966.1 13489 11482 9903.7 9804.7 7025 TRUE FALSE 8146.120026 7816.463426 11465.9351 9746.802247 8614.045863 14002.33335 9974.399608 11198.14759 10657.49508 6795.774825 1.198703641 1.150194588 1.687215277 1.434244438 1.267559047 2.060446926 1.467735448 1.647810277 1.568253122 1 12.73042233 -5.249747335 24.31318185 1.545628204 1.174449025 0.207323281 0.262815734 705.7033794 1467474.14 0.063903334 0.165804816 5.63E-06 5.249747335 -0.371179179 RPPS(ph)PEPSTK ddPTM_A459_MK2206_30min_R1 6 RPPSPEPSTK 10 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 RPPS(0.95)PEPS(0.043)T(0.007)K;RPPS(1)PEPSTK;RPPS(1)PEPSTK;RPPS(1)PEPSTK;RPPS(0.852)PEPS(0.143)T(0.004)K;RPPS(1)PEPSTK 120.59 0.0090532 10576100000 43937.2 57301.1 43881.6 42651.4 44305.7 39261.9 43453.7 42582.8 31469.7 38955.1 TRUE FALSE 40200.11042 53570.78798 40903.03925 45936.41822 42540.91015 41484.87485 40554.98296 42210.50307 34741.08793 43781.15188 0.918205865 1.223603895 0.934261377 1.049228178 0.971671788 0.947551014 0.926311465 0.964125 0.793516992 1 15.41802229 -6.475409189 0.927480885 0.912509046 1.053192622 0.221854676 0.092082678 0.767407748 1.436209051 0.046200328 0.058005482 3.35E-07 6.475409189 0.140683576 RPPS(ph)PEPSTK ddPTM_A459_MK2206_30min_R2 2 RPPSPEPSTK 10 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 RPPS(0.999)PEPS(0.001)TK;RPPS(1)PEPSTK 112.02 0.015248 6065000000 481069 516896 541532 540159 554444 465437 555214 468931 495135 523841 TRUE FALSE 517900.0125 491227.6963 559586.4066 496026.2818 532673.7427 483149.5312 482313.7349 530221.8918 538200.9473 506748.1111 1.022006794 0.969372526 1.104269349 0.978841896 1.051160786 0.953431341 0.951782008 1.046322384 1.062067989 1 18.95090928 RPPS(ph)PPGPEER ddPTM_A459_MK2206_30min_R2 1 RPPSPPGPEER 11 1 F5H1N7;Q6ZU35 F5H1N7 KIAA1211 Uncharacterized protein KIAA1211 1 RPPS(1)PPGPEER 80.706 0.022217 2037800 5973.5 11262 9546.5 12335 8884.9 12230 12374 7966.4 9655.2 4304.2 TRUE FALSE 6430.835753 10702.74546 9864.775545 11327.19104 8536.034183 12695.42122 10749.27894 9007.635833 10494.99184 4163.754306 1.54448012 2.570455572 2.369202124 2.720427338 2.050081142 3.049032264 2.581631418 2.163344705 2.520559829 1 12.02366923 -4.754699905 24.81455892 2.406497579 1.544478503 0.158962001 0.524189814 332.875701 1225517.373 0.11880912 1.123939257 1.76E-05 4.754699905 -0.862019076 RPPTPAPWPSSGLGTPLT(ph)PPK ddPTM_A459_MK2206_30min_R1 2 RPPTPAPWPSSGLGTPLTPPK 21 1 M0R0S1;M0R2P6;Q8TBC3;M0R1G0;M0QZE8;M0R0K4;M0QYB1;M0R0E3;M0R0S2 M0R0S1 SHKBP1 SH3KBP1-binding protein 1 1 RPPTPAPWPSSGLGT(0.001)PLT(0.999)PPK;RPPTPAPWPSSGLGTPLT(1)PPK 139.45 2.85E-05 27335000 6325.2 5929.3 6372.6 5278.5 4680.3 4265.7 4977.5 5427.6 5460.5 5263.2 TRUE FALSE 5787.208525 5543.301492 5940.045667 5685.050985 4493.87374 4507.220248 4645.460057 5380.147065 6028.138516 5915.244951 0.97835484 0.937121208 1.004192678 0.961084627 0.759710507 0.761966797 0.785336887 0.909539184 1.019085188 1 12.5302222 -6.091680706 10.77003832 0.858236587 0.971775177 0.224118679 0.08671005 0.81920552 92.65782863 0.027199674 0.035138682 8.10E-07 6.091680706 0.11353859 RPPTPAPWPSSGLGTPLT(ph)PPK ddPTM_A459_MK2206_30min_R2 2 RPPTPAPWPSSGLGTPLTPPK 21 1 M0R0S1;M0R2P6;Q8TBC3;M0R1G0;M0QZE8;M0R0K4;M0QYB1;M0R0E3;M0R0S2 M0R0S1 SHKBP1 SH3KBP1-binding protein 1 1 RPPTPAPWPSSGLGTPLT(1)PPK;RPPTPAPWPSSGLGT(0.001)PLT(0.999)PPK 112.37 0.00011823 21418000 85043 90028 78810 80737 82433 68965 101038 72754 61959 99803 TRUE FALSE 91553.95747 85557.34043 81437.48607 74140.52884 79196.26623 71589.5114 87771.58923 82263.1976 67348.08182 96546.43628 0.948289352 0.886178131 0.843505873 0.767926106 0.820291968 0.741503407 0.909112678 0.852058354 0.697571909 1 16.55893539 -5.0184902 2.012119018 0.820074915 0.955399987 0.175632301 0.0809664 0.728338946 4.572019785 0.021138257 0.153041527 9.58E-06 5.0184902 0.135325072 RPQHNSSGAS(ph)PR ddPTM_A459_MK2206_30min_R2 1 RPQHNSSGASPR 12 1 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 RPQHNS(0.005)S(0.005)GAS(0.991)PR 83.292 0.017819 813270 0 0 0 0 0 0 651.84 3341 446 0 TRUE FALSE 0 0 0 0 0 0 566.252625 3777.680171 484.7922738 0 0 RPQS(ph)PGASPSQAER ddPTM_A459_MK2206_30min_R1 3 RPQSPGASPSQAER 14 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 RPQS(0.996)PGAS(0.003)PS(0.001)QAER;RPQS(1)PGASPSQAER;RPQS(0.999)PGAS(0.001)PSQAER 172.82 0.00020756 8456300 1452.39 895.2 779.83 701.3 1437.83 1496.65 1336.01 933.86 981.72 1009.03 TRUE FALSE 1328.856604 836.9223173 726.8973123 755.3142475 1380.558186 1581.38903 1246.887211 925.6953605 1083.773307 1134.036254 1.171793758 0.738003141 0.640982429 0.666040653 1.217384525 1.394478372 1.099512653 0.816283745 0.955677831 1 10.14725105 -6.260560252 24.99666808 1.088014308 0.787817535 0.314630173 0.199046593 102.8320283 2923873.598 0.066124206 0.080474906 5.49E-07 6.260560252 -0.300196774 RPQS(ph)PGASPSQAER ddPTM_A459_MK2206_30min_R2 2 RPQSPGASPSQAER 14 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 RPQS(1)PGASPSQAER;RPQS(0.996)PGAS(0.004)PSQAER 99.238 0.017657 15150800 7089.9 8455.3 8659.8 7232.5 10125.2 7590.5 9646.2 8067.2 7483 8004.2 TRUE FALSE 7632.708195 8035.422097 8948.51341 6641.581614 9727.633773 7879.361796 8379.642353 9121.610739 8133.857814 7743.02361 0.985752928 1.03776283 1.155687217 0.857750402 1.256309455 1.017607874 1.082218365 1.17804248 1.050475657 1 12.91868133 -6.265494445 24.97217208 1.1015915 1.021736447 0.156749049 0.098249954 697.2589257 4293903.351 0.028773319 0.033877705 5.43E-07 6.265494445 -0.079855053 RPQS(ph)PSPR ddPTM_A459_MK2206_30min_R2 1 RPQSPSPR 8 1 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 RPQS(0.989)PS(0.011)PR 68.786 0.038923 4676500 4759.8 2827.8 2776.9 3991.1 3231.3 3240.4 3384.4 5655.8 4256.5 3953.8 TRUE FALSE 5124.213948 2687.375564 2869.48046 3665.014363 3104.422926 3363.715693 2940.024215 6395.032479 4626.722676 3824.78783 1.339738092 0.702620821 0.750232585 0.958226842 0.811658859 0.879451578 0.76867642 1.671996661 1.209667799 1 11.901164 -7.741579213 24.99882934 1.330624343 0.874384799 0.394920873 0.228935084 196.7688203 247681.798 0.102225584 0.058919093 1.81E-08 7.741579213 -0.456239544 RPQSPGAS(ph)PSQAER ddPTM_A459_MK2206_30min_R1 1 RPQSPGASPSQAER 14 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 RPQS(0.101)PGAS(0.718)PS(0.18)QAER 115.1 0.0051112 2709700 504.54 555.52 666.67 388.49 483.3 655.73 673.91 492.93 305.83 568.13 TRUE FALSE 461.6262236 519.355547 621.4182978 418.4115671 464.0491376 692.8568659 628.9546935 488.620365 337.6221229 638.5142336 0.722969355 0.813381315 0.973225443 0.655289334 0.726763967 1.085107942 0.985028462 0.765245846 0.528762094 1 9.31857497 -4.802607044 4.611085022 0.838158425 0.718156794 0.042447652 0.165539922 0.718843115 31.07204644 0.043041477 0.252501583 1.58E-05 4.802607044 -0.120001632 RPQYSNPPVQGEVMEGADNQGAGEQGRPVR ddPTM_A459_MK2206_30min_R1 2 RPQYSNPPVQGEVMEGADNQGAGEQGRPVR 30 2 H0Y449;P67809;C9J5V9 H0Y449 YBX1 Nuclease-sensitive element-binding protein 1 0 ; 73.435 4.63E-05 53124000 2912.4 2973.4 2515.9 2628.8 2919.4 3194.4 3100.1 2976.6 2230.08 2080.27 FALSE TRUE 2664.685086 2779.83112 2345.127718 2831.270631 2803.114116 3375.264167 2893.297985 2950.5759 2461.904796 2337.989553 1.13973353 1.18898355 1.003053121 1.210985151 1.198942105 1.443660928 1.237515361 1.262014151 1.053000769 1 11.19105277 -5.966168243 24.97940008 1.224478124 1.116527591 0.08204726 0.121955673 368.8068063 272303.2167 0.03417801 0.050693933 1.08E-06 5.966168243 -0.107950533 RPS(ph)ASSPNNNTAAK ddPTM_A459_MK2206_30min_R1 3 RPSASSPNNNTAAK 14 1 O75151;E7ET14;A0A087WW48 O75151 PHF2 Lysine-specific demethylase PHF2 1 RPS(0.987)AS(0.01)S(0.003)PNNNTAAK;RPS(0.995)AS(0.004)S(0.001)PNNNTAAK;RPS(0.928)AS(0.036)S(0.036)PNNNTAAK 117.84 0.0012559 4735420 2682.1 3122.03 2936.03 2374.54 3102.44 2830.76 3033.65 2741.67 2027.13 2208.88 TRUE FALSE 2453.973311 2918.78528 2736.740464 2557.427482 2978.863245 2991.035185 2831.280744 2717.699868 2237.857418 2482.532731 0.988495854 1.175728821 1.102398542 1.030168686 1.199929092 1.204832125 1.140480731 1.094728716 0.901441254 1 11.27759702 -8.153892446 5.110144646 0.952612215 1.123970786 0.481064068 0.069283184 0.182117345 6.898774622 0.050121003 0.017970762 7.02E-09 8.153892446 0.171358571 RPS(ph)ASSPNNNTAAK ddPTM_A459_MK2206_30min_R2 1 RPSASSPNNNTAAK 14 1 O75151;E7ET14;A0A087WW48 O75151 PHF2 Lysine-specific demethylase PHF2 1 RPS(0.931)AS(0.022)S(0.047)PNNNTAAK 107.62 0.0026416 2052900 6754.3 8741.1 5495.9 7952.1 6059.8 5392.3 5757.4 4839.2 4888.6 4603.1 TRUE FALSE 7271.414401 8307.029685 5679.130563 7302.387992 5821.861804 5597.507755 5001.446464 5471.700055 5313.801591 4452.901224 1.632961082 1.865531991 1.27537762 1.639916905 1.307431158 1.257047366 1.123188279 1.228794393 1.19333471 1 12.12052989 -5.102266073 0.301801932 1.027688247 2.223014933 0.714563414 0.137154243 3.296745827 0.286170778 0.153631431 1.434418385 7.90E-06 5.102266073 1.195326685 RPS(ph)DSGPPAER ddPTM_A459_MK2206_30min_R1 1 RPSDSGPPAER 11 1 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 RPS(0.993)DS(0.007)GPPAER 127.79 0.005207 13639000 3760.2 3427 3730.4 3100.3 3848.7 3555.9 3703.1 2854.3 2629 2474.1 TRUE FALSE 3440.375244 3203.901677 3477.190841 3339.085643 3695.398129 3757.231985 3456.072956 2829.345156 2902.293958 2780.610187 1.237273481 1.152229713 1.250513595 1.200846368 1.328988201 1.351225714 1.2429189 1.017526718 1.043761536 1 11.44118579 -7.753317104 7.741101017 1.022374319 1.253232931 0.791815512 0.054414619 0.062470634 24.49194435 0.03052702 0.016413912 1.76E-08 7.753317104 0.230858613 RPS(ph)DSGPPAER ddPTM_A459_MK2206_30min_R2 1 RPSDSGPPAER 11 1 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 RPS(0.986)DS(0.014)GPPAER 113.37 0.012817 15921000 27018 35879 26736 28947 28414 25367 24780 20896 23928 25938 TRUE FALSE 29086.51885 34097.30103 27627.3649 26581.9375 27298.32359 26332.35896 21526.35623 23627.17895 26009.21419 25091.64518 1.159211309 1.358910537 1.101058328 1.059393966 1.087944748 1.049447287 0.857909319 0.941635304 1.036568706 1 14.61491945 -5.838307622 0.839660199 0.964550048 1.276197448 0.627190562 0.077353065 0.496220917 0.655142688 0.036153936 0.10834124 1.45E-06 5.838307622 0.311647399 RPS(ph)EGNEPSTK ddPTM_A459_MK2206_30min_R1 1 RPSEGNEPSTK 11 1 F2Z329;A0A087WWU1;Q96Q45-2;Q96Q45;Q96Q45-5;Q96Q45-3 F2Z329 TMEM237 Transmembrane protein 237 1 RPS(0.991)EGNEPS(0.006)T(0.003)K 117.48 0.010032 6199400 2199.4 2056.2 1243.2 1270.6 1622.4 1428.2 1639.1 1829.1 1363 1538.1 TRUE FALSE 2012.32948 1922.341006 1158.815048 1368.461832 1557.776373 1509.06345 1529.75863 1813.108372 1504.688728 1728.65144 1.164103667 1.112046629 0.670357841 0.791635491 0.901151231 0.872971505 0.884943369 1.04885712 0.870440791 1 10.75543128 -5.091327977 8.469726291 0.879459177 1.151306277 0.530062991 0.097711412 0.227884807 19.06059078 0.026064007 0.069692827 8.10E-06 5.091327977 0.271847099 RPS(ph)EGNEPSTK ddPTM_A459_MK2206_30min_R2 2 RPSEGNEPSTK 11 1 F2Z329;A0A087WWU1;Q96Q45-2;Q96Q45;Q96Q45-5;Q96Q45-3 F2Z329 TMEM237 Transmembrane protein 237 1 RPS(1)EGNEPSTK;RPS(0.999)EGNEPS(0.001)TK 111.12 0.015142 7197600 40306 18777.2 22717.2 21452 17575.8 23686 32881 14828.1 26659 19245.9 TRUE FALSE 43391.85835 17844.75155 23474.58011 19699.30298 16885.68578 24587.38733 28563.6852 16766.18358 28977.75163 18617.90786 2.330651686 0.958472439 1.260860258 1.0580836 0.906959359 1.320631057 1.534204886 0.90054069 1.556445109 1 14.18440334 -4.755001281 24.99888134 1.170933482 2.330653624 0.692811013 0.232587517 120.4430261 467632.0755 0.055842995 0.51668724 1.76E-05 4.755001281 1.159720142 RPS(ph)EGPQPLVR ddPTM_A459_MK2206_30min_R2 2 RPSEGPQPLVR 11 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 RPS(1)EGPQPLVR;RPS(1)EGPQPLVR 66.784 0.039361 10166700 20507.4 31109 28498 28179 26553 23905 26849 23786 21934 27355 TRUE FALSE 22077.46231 29564.1723 29448.1091 25876.68556 25510.3958 24814.72153 23323.69405 26894.91187 23841.77967 26462.40859 0.83429527 1.11721396 1.112827995 0.977865846 0.964023956 0.937734804 0.881389688 1.016344063 0.900967861 1 14.69165676 -5.988498579 24.75829348 0.949033604 1.033409977 0.126645262 0.08206318 345.5203616 743769.4109 0.022743777 0.033702695 1.03E-06 5.988498579 0.084376373 RPS(ph)GELEQR ddPTM_A459_MK2206_30min_R2 1 RPSGELEQR 9 1 Q96NG3 Q96NG3 TTC25 Tetratricopeptide repeat protein 25 1 RPS(1)GELEQR 67.997 0.041387 2053500 8253 7334.1 9413.5 9470.9 6935.5 7291.4 6399.4 7572.9 6208.3 7053.1 TRUE FALSE 8884.856025 6969.899259 9727.341392 8697.097174 6663.177422 7568.879336 5559.151093 8562.704032 6748.286712 6822.957925 1.302200032 1.02153631 1.425678056 1.274681344 0.976581931 1.109325225 0.814771416 1.254984147 0.989055888 1 12.7361816 -6.256535618 24.86935976 1.030661829 1.251392981 0.397586525 0.139658881 420.9755844 2134969.932 0.040817769 0.051006202 5.54E-07 6.256535618 0.220731152 RPS(ph)LGELLLR ddPTM_A459_MK2206_30min_R2 1 RPSLGELLLR 10 1 Q8N612;Q8N612-2 Q8N612 FAM160A2 FTS and Hook-interacting protein 1 RPS(1)LGELLLR 83.856 0.020078 2612400 4970.1 4850.1 5228.4 5672.5 6359.6 5049.8 6216.9 5142 4618.8 5637.8 TRUE FALSE 5350.614677 4609.251087 5402.712246 5209.038605 6109.89015 5241.973678 5400.613562 5814.077055 5020.534875 5453.839048 0.981073081 0.845138818 0.990625539 0.955114106 1.120291614 0.961152984 0.99024073 1.066052189 0.920550612 1 12.41305641 -5.428840875 7.362738638 1.004866997 0.913053743 0.24372918 0.061683346 0.333704821 22.84781242 0.015412637 0.032237388 3.73E-06 5.428840875 -0.091813254 RPS(ph)NSTPPPTQLSK ddPTM_A459_MK2206_30min_R2 1 RPSNSTPPPTQLSK 14 1 E9PFR3;Q14738-2;Q14738 E9PFR3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform 1 RPS(0.333)NS(0.333)T(0.333)PPPTQLSK 77.795 0.02024 9423800 35237 35918 35316 33589 32871 26568 39650 28653 29016 39388 TRUE FALSE 37934.77181 34134.36435 36493.41781 30844.67125 31580.31938 27579.06386 34443.90737 32398.04548 31539.75923 38102.77279 0.995590847 0.895849878 0.957762786 0.80951251 0.828819455 0.723807268 0.903973775 0.850280521 0.827754962 1 15.21760837 -5.756042728 24.99660767 0.839138601 0.944346064 0.291193678 0.070552924 155.1239803 718504.7647 0.018546999 0.030967497 1.75E-06 5.756042728 0.105207463 RPS(ph)PGEMR ddPTM_A459_MK2206_30min_R1 1 RPSPGEMR 8 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-3;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 RPS(1)PGEMR 100.82 0.0090012 4499500 841.99 492.6 573.62 402.33 715.45 462.85 799.32 566.46 552.73 673.89 TRUE FALSE 770.374329 460.5316505 534.6842726 433.3175263 686.9521115 489.056167 745.9988212 561.5074999 610.1882615 757.3765808 1.01716154 0.608061646 0.705968848 0.572129555 0.907015254 0.64572391 0.984977408 0.74138482 0.805660324 1 9.564867001 -7.251684768 24.94758164 0.861454377 0.734607167 0.174677755 0.145834554 1279.206934 3271598.87 0.054314086 0.041526638 5.60E-08 7.251684768 -0.12684721 RPS(ph)PGEMR ddPTM_A459_MK2206_30min_R2 4 RPSPGEMR 8 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-3;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 RPS(1)PGEMR;RPS(1)PGEMR;RPS(1)PGEMR;RPS(1)PGEMR 95.815 0.01108 18676000 14453.2 17818.7 15512.1 17126.4 14202.8 18206.9 14813.3 15774.8 16161.5 14232.9 TRUE FALSE 15559.7481 16933.84927 16029.26567 15727.11834 13645.12671 18899.77634 12868.29592 17836.62052 17567.19806 13768.48164 1.130099056 1.229899543 1.164199953 1.142255097 0.991040775 1.372684137 0.934619826 1.295467503 1.275899443 1 13.74908185 RPS(ph)PPEPWDEEDGASCSTFFGSEER ddPTM_A459_MK2206_30min_R1 4 RPSPPEPWDEEDGASCSTFFGSEER 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 RPS(1)PPEPWDEEDGASCSTFFGSEER;RPS(1)PPEPWDEEDGASCSTFFGSEER;RPS(1)PPEPWDEEDGASCSTFFGSEER;RPS(1)PPEPWDEEDGASCSTFFGSEER 165.32 3.11E-16 72655000 3295.11 3335.44 3440.31 2558.31 2941.33 3319.18 3516.11 3159.42 3236.58 3787.84 TRUE FALSE 3014.843591 3118.30225 3206.791342 2755.351479 2824.170598 3507.109103 3281.556717 3131.797524 3573.034073 4257.106216 0.708190832 0.73249341 0.753279618 0.647235784 0.663401488 0.823824665 0.770842105 0.735663468 0.83931053 1 12.05565737 -9.058479895 0.476445053 1.019555069 0.707424705 0.773585054 0.046048865 1.063747535 0.43205867 0.091270438 0.027693256 8.74E-10 9.058479895 -0.312130365 RPS(ph)PPEPWDEEDGASCSTFFGSEER ddPTM_A459_MK2206_30min_R2 4 RPSPPEPWDEEDGASCSTFFGSEER 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 RPS(0.988)PPEPWDEEDGAS(0.008)CS(0.003)T(0.001)FFGSEER;RPS(1)PPEPWDEEDGASCSTFFGSEER;RPS(1)PPEPWDEEDGASCSTFFGSEER;RPS(1)PPEPWDEEDGASCSTFFGSEER 115.84 4.00E-08 49293300 78426 73961 66516 81904.6 74714.7 86140.7 81854 69664.9 64954.5 89074 TRUE FALSE 84430.35486 70288.20429 68733.61024 75212.73218 71781.02547 89418.8447 71106.47148 78770.34163 70604.125 86167.52267 0.979839645 0.815715737 0.797674206 0.872866364 0.833040376 1.037732569 0.825211974 0.914153491 0.819382092 1 16.39485659 RPS(ph)PPPQPSSVK ddPTM_A459_MK2206_30min_R1 1 RPSPPPQPSSVK 12 1 H3BLZ3;Q8IX03-2;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 RPS(1)PPPQPSSVK 77.279 0.023695 2673700 2164 2554.7 2387.8 2402.6 2641.6 2058.5 2686.2 2332.4 2189.3 2159.7 TRUE FALSE 1979.940436 2388.388566 2225.722789 2587.648668 2536.379478 2175.050491 2507.008499 2312.008073 2416.885569 2427.259941 0.815710095 0.983985491 0.916969275 1.066078101 1.044955851 0.896092938 1.032855384 0.952517707 0.995725892 1 11.2451129 -4.069506417 1.481821382 0.990673949 2.65E-12 0.495546704 0.051677966 7.078567493 3.056481442 0.014316379 17.29637029 8.52E-05 4.069506417 -0.990673949 RPS(ph)PPPQPSSVK ddPTM_A459_MK2206_30min_R2 2 RPSPPPQPSSVK 12 1 H3BLZ3;Q8IX03-2;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 RPS(1)PPPQPSSVK;RPS(1)PPPQPSSVK 106.54 0.0045472 8156700 46254 45901 46606 46292 46954 44846 68783 50318 48604 57150 TRUE FALSE 49795.2418 43621.62309 48159.82078 42509.79552 45110.35004 46552.64596 59751.70948 56894.73537 52831.48806 55285.20018 0.900697504 0.789028943 0.87111597 0.76891818 0.815957071 0.842045354 1.080790325 1.02911331 0.955617198 1 15.7546057 -7.211243888 7.850052772 1.018662102 0.827213374 0.797872305 0.045609952 0.125076393 17.90350019 0.017159838 0.013222776 6.15E-08 7.211243888 -0.191448728 RPS(ph)PQPSPR ddPTM_A459_MK2206_30min_R1 2 RPSPQPSPR 9 1 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RPS(1)PQPSPR;RPS(1)PQPSPR 84.821 0.018476 24846000 924.85 882.84 888.42 841.53 1112.59 812.63 1033.57 1002.05 541.74 1007.83 TRUE FALSE 846.1866509 825.3669555 828.1165257 906.3447864 1068.273184 858.6404083 964.6224312 993.2891825 598.0558116 1132.687589 0.747060936 0.728680144 0.731107618 0.800171905 0.943131358 0.75805581 0.851622672 0.876931285 0.527997144 1 10.14553429 -5.835448634 4.909318718 0.822192159 0.734862176 0.103079995 0.11878918 0.491918091 21.71322501 0.032677678 0.050253989 1.46E-06 5.835448634 -0.087329983 RPS(ph)PQPSPR ddPTM_A459_MK2206_30min_R2 3 RPSPQPSPR 9 1 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RPS(1)PQPSPR;RPS(0.999)PQPS(0.001)PR;RPS(1)PQPSPR 94.767 0.013423 30066100 7721.12 9104.6 8150.7 8094.2 7867.24 7937.7 9039.47 7985.3 7283.7 6018.65 TRUE FALSE 8312.254884 8652.478803 8422.44027 7432.877968 7558.332628 8239.774736 7852.576731 9029.006128 7917.22306 5822.261943 1.427667625 1.486102633 1.446592467 1.276630636 1.298178045 1.41521883 1.34871581 1.550772915 1.359819111 1 12.50736403 -8.563363223 22.47069599 0.999999999 1.404114603 0.705372397 0.07826676 3724.468135 2067242.317 0.080526275 0.020791795 2.73E-09 8.563363223 0.404114603 RPS(ph)PSSQSSSLLTESEQCSLDGK ddPTM_A459_MK2206_30min_R1 1 RPSPSSQSSSLLTESEQCSLDGK 23 1 Q5D1E8 Q5D1E8 ZC3H12A Ribonuclease ZC3H12A 1 RPS(0.425)PS(0.188)S(0.188)QS(0.064)S(0.064)S(0.064)LLT(0.007)ES(0.001)EQCSLDGK 55.012 0.010272 5028800 925.44 773.6 1005.1 720.95 1045.2 941.68 1148.9 992.81 799.44 1002.6 TRUE FALSE 846.7264683 723.2384994 936.8766124 776.4776939 1003.567471 994.9971078 1072.258977 984.1299668 882.5446488 1126.809657 0.751437 0.641846202 0.831441767 0.689093929 0.890627325 0.883021459 0.951588381 0.873377292 0.78322425 1 10.13802812 -6.271141177 23.93320845 0.892675179 0.729624619 0.588230149 0.069013758 273.4353596 674531.8484 0.02076506 0.023862638 5.36E-07 6.271141177 -0.16305056 RPS(ph)PSSQSSSLLTESEQCSLDGK ddPTM_A459_MK2206_30min_R2 1 RPSPSSQSSSLLTESEQCSLDGK 23 1 Q5D1E8 Q5D1E8 ZC3H12A Ribonuclease ZC3H12A 1 RPS(0.186)PS(0.186)S(0.186)QS(0.186)S(0.127)S(0.127)LLTESEQCSLDGK 96.848 3.56E-05 5294200 40783 44660 44236 51367 47237 39742 51506 40776 43362 47147 TRUE FALSE 43905.37784 42442.24934 45710.80616 47170.15179 45382.23803 41254.40966 44743.20033 46105.5632 47133.54838 45608.59725 0.962655738 0.930575635 1.002241001 1.034238162 0.995036918 0.904531429 0.981025575 1.010896322 1.033435607 1 15.47701818 -7.757285283 4.405445907 1.01771599 0.972645798 0.233426832 0.035037127 0.322256396 14.96219693 0.02081794 0.010465367 1.75E-08 7.757285283 -0.045070192 RPS(ph)QEQSASASSGQPQAPLNR ddPTM_A459_MK2206_30min_R1 5 RPSQEQSASASSGQPQAPLNR 21 1 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(0.951)QEQS(0.048)ASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR 272.31 7.36E-60 82956200 3440.38 3570.42 3450.03 3043.61 3762.92 2983.71 3524.25 3515.4 2975.3 2999.88 TRUE FALSE 3147.757615 3337.985009 3215.851576 3278.02937 3613.034928 3152.645082 3289.153713 3484.665228 3284.593082 3371.527782 0.933629446 0.990051165 0.953826213 0.972268236 1.071631368 0.935079075 0.975567732 1.03355673 0.974215043 1 11.71918677 -2.524429169 0.620998075 0.995088609 5.43E-08 0.173390888 0.037012835 94.12171521 2.549014531 0.016319168 116.5185045 0.002989309 2.524429169 -0.995088554 RPS(ph)QEQSASASSGQPQAPLNR ddPTM_A459_MK2206_30min_R2 2 RPSQEQSASASSGQPQAPLNR 21 1 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 RPS(0.994)QEQS(0.005)AS(0.001)ASSGQPQAPLNR;RPS(0.985)QEQS(0.014)AS(0.001)ASSGQPQAPLNR 83.065 0.00073734 135776000 24638 35856 29162 25879 23384 21669 24724 20596.8 21332.1 30936 TRUE FALSE 26524.30422 34075.44318 30134.24653 23764.60292 22465.82666 22493.62898 21477.7091 23288.87248 23187.5275 29926.56085 0.886313143 1.138635453 1.006939844 0.794097358 0.750698578 0.751627596 0.717680498 0.778200763 0.774814307 1 14.86913887 -5.75892651 5.077559953 0.777904302 1.026602835 0.523190829 0.093093543 0.114991296 8.309051739 0.024366723 0.040076288 1.74E-06 5.75892651 0.248698532 RPS(ph)QNAISFFNVGHSK ddPTM_A459_MK2206_30min_R2 1 RPSQNAISFFNVGHSK 16 1 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 RPS(0.994)QNAIS(0.006)FFNVGHSK 79.383 0.017021 3394600 17453 17229 20233 22286 20119 20623 17633 12916 26034 15171 TRUE FALSE 18789.2151 16373.43291 20907.55812 20465.16251 19329.02697 21407.82272 15317.76592 14604.16555 28298.39026 14675.97151 1.280270617 1.115662626 1.424611523 1.39446731 1.317052636 1.458698846 1.043730966 0.995107243 1.928212401 1 13.84116839 -7.225680539 24.98090954 1.241354519 1.328367446 0.026645919 0.266086763 3051.410737 2131700.452 0.099829305 0.077324245 5.95E-08 7.225680539 0.087012927 RPS(ph)RHDNSAIGR ddPTM_A459_MK2206_30min_R2 2 RPSRHDNSAIGR 12 2 Q9NZN5-2;E9PMR6;Q9NZN5 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 RPS(1)RHDNSAIGR;RPS(1)RHDNSAIGR 54.7 0.04495 1797510 668.39 1005.7 761.21 1467.1 1006.14 1365.01 696.39 1429.09 1928.79 1661.53 TRUE FALSE 719.5624523 955.7584004 786.5883615 1347.233237 966.6338882 1416.956412 604.9531565 1615.87697 2096.552668 1607.314412 0.44767996 0.594630642 0.489380519 0.838188986 0.60139689 0.881567664 0.376375121 1.005327245 1.304382423 1 10.65043645 -7.927905871 6.055882416 1.153807325 0.620363353 0.663992108 0.164475486 0.111548834 7.006147937 0.088930272 0.04175705 1.18E-08 7.927905871 -0.533443972 RPS(ph)STSVPLGDK ddPTM_A459_MK2206_30min_R2 1 RPSSTSVPLGDK 12 1 Q9NXR1;Q9NXR1-1;I3L533;I3L2R9;I3L2T8 Q9NXR1 NDE1 Nuclear distribution protein nudE homolog 1 1 RPS(0.983)S(0.016)T(0.002)SVPLGDK 91.789 0.040508 4376100 17569 17690 24043 21643 12253 11226 17224 11671 12785 15101 TRUE FALSE 18914.09615 16811.54032 24844.58162 19874.69767 11771.88565 11653.2133 14962.46811 13196.43977 13897.01619 14608.25561 1.294753916 1.150824628 1.700721995 1.360511358 0.805837875 0.797714225 1.02424742 0.903354934 0.951312502 1 13.83449629 -6.251374063 23.44771829 0.908635874 1.383713124 0.71033619 0.144781701 167.8520456 391019.5989 0.044477362 0.05663944 5.61E-07 6.251374063 0.47507725 RPS(ph)TADGEGDERPFTQAGLGADER ddPTM_A459_MK2206_30min_R2 2 RPSTADGEGDERPFTQAGLGADER 24 2 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 RPS(0.5)T(0.5)ADGEGDERPFTQAGLGADER;RPS(0.5)T(0.5)ADGEGDERPFTQAGLGADER 48.315 0.020438 8813100 13251.5 22949.4 17398.9 29723 25297 27140 27029 21197.4 23229 23366.1 TRUE FALSE 14266.04503 21809.76617 17978.97064 27294.53582 24303.71267 28172.83172 23480.05983 23967.97296 25249.41643 22603.66607 0.63113855 0.964877383 0.795400648 1.207526944 1.075211101 1.246383292 1.038772196 1.060357771 1.117049613 1 14.46426916 -4.65373314 0.875927656 1.106485433 0.337167291 0.622978195 0.107332545 1.770151542 0.91032578 0.03709621 1.382813223 2.22E-05 4.65373314 -0.769318142 RPS(ph)TEDTHEVDSK ddPTM_A459_MK2206_30min_R2 1 RPSTEDTHEVDSK 13 1 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 RPS(0.802)T(0.198)EDT(0.001)HEVDSK 88.427 0.012224 4800800 42136 30855 29867 27419 26184 32235 45024 27145 35964 29438 TRUE FALSE 45361.96456 29322.78557 30862.75087 25178.77999 25155.8846 33461.72551 39112.29472 30692.9447 39092.08371 28477.44047 1.592908766 1.029684729 1.083761404 0.884165837 0.883361853 1.175025738 1.373448388 1.077798573 1.372738668 1 14.79753186 -6.986403133 24.974237 1.221302146 1.073882357 0.052049802 0.21433135 590.5732835 1084739.765 0.075958974 0.066957889 1.03E-07 6.986403133 -0.147419789 RPS(ph)TSQTVSTPAPVPVIESTEAIEAK ddPTM_A459_MK2206_30min_R1 1 RPSTSQTVSTPAPVPVIESTEAIEAK 26 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 RPS(0.576)T(0.181)S(0.181)QT(0.038)VS(0.014)T(0.01)PAPVPVIESTEAIEAK 125.35 3.84E-09 4399900 1289.7 1382.3 1413.1 1168.3 919.69 657.19 1174 841.96 983.34 836.45 TRUE FALSE 1180.004243 1292.312019 1317.182709 1258.282668 883.0567998 694.3995299 1095.684602 834.5988325 1085.561712 940.0757409 1.255222522 1.374689254 1.401145303 1.338490734 0.939346439 0.738663386 1.165528004 0.887799564 1.15475984 1 9.876633188 -6.257220872 23.94150071 0.972514122 1.348891328 0.681096562 0.121022389 112.9880669 641244.8708 0.03573334 0.044439071 5.53E-07 6.257220872 0.376377205 RPS(ph)TSQTVSTPAPVPVIESTEAIEAK ddPTM_A459_MK2206_30min_R2 1 RPSTSQTVSTPAPVPVIESTEAIEAK 26 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 RPS(0.197)T(0.197)S(0.197)QT(0.137)VS(0.137)T(0.137)PAPVPVIESTEAIEAK 72.654 0.00023126 4142600 31860 38684 35978 37789 32406 28203 33381 21834 31348 28782 TRUE FALSE 34299.2261 36763.00881 37177.48856 34701.51782 31133.57761 29276.28493 28998.0346 24687.77877 34074.59238 27842.8457 1.231886513 1.32037541 1.335261811 1.24633517 1.118189497 1.051483216 1.041489613 0.886683029 1.223818598 1 14.76501905 -6.356752124 1.929348271 1.032010899 1.299441548 0.668548742 0.081197624 0.191024721 1.402155592 0.027843707 0.033980276 4.40E-07 6.356752124 0.267430649 RPS(ph)VASSVSEEYFEVR ddPTM_A459_MK2206_30min_R2 1 RPSVASSVSEEYFEVR 16 1 A6ND36;A6ND36-2;K7EKG0 A6ND36 FAM83G Protein FAM83G 1 RPS(0.999)VASSVSEEYFEVR 124.2 0.00093009 0 6142.1 5834.5 5281.2 2943.6 5089.3 1429.6 3049 1942.8 4490.4 1688.5 TRUE FALSE 6612.343898 5544.767214 5457.272572 2703.098464 4889.46851 1484.00443 2648.662637 2196.730631 4880.966875 1633.404383 4.048197719 3.394607772 3.341041954 1.654886256 2.993421935 0.908534619 1.621559648 1.344878619 2.988217079 1 10.67366629 -5.535783732 0.930720765 1.671186257 4.198178019 0.586170881 0.695793895 0.602085579 0.841365959 0.263387567 1.22278447 2.91E-06 5.535783732 2.526991762 RPS(ph)VGSQSNQAGQGK ddPTM_A459_MK2206_30min_R2 3 RPSVGSQSNQAGQGK 15 1 Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y3N9 Q9UPP1-4 PHF8 Histone lysine demethylase PHF8 1 RPS(0.998)VGS(0.002)QSNQAGQGK;RPS(0.999)VGS(0.001)QSNQAGQGK;RPS(0.982)VGS(0.017)QSNQAGQGK 149.72 0.00014358 16357750 78577.6 85628.5 75799.9 82052.9 58200.1 61600.9 72267.2 71248.3 65776.9 78102.9 TRUE FALSE 84593.56147 81376.31321 78327.03083 75348.9156 55914.87164 63945.16542 62778.42983 80560.69744 71498.05586 75554.40877 1.11963766 1.077055787 1.036697025 0.997280196 0.740061004 0.846345918 0.830903595 1.066260709 0.946312161 1 16.20522832 -5.879360347 3.063755164 0.900045481 1.081801574 0.431736198 0.088274682 0.251438064 4.713774567 0.02803928 0.044958993 1.32E-06 5.879360347 0.181756093 RPS(ph)VNGEPGSVPPPR ddPTM_A459_MK2206_30min_R1 3 RPSVNGEPGSVPPPR 15 1 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 RPS(1)VNGEPGSVPPPR;RPS(1)VNGEPGSVPPPR;RPS(1)VNGEPGSVPPPR 181.81 3.68E-05 22942500 2957.65 2858.67 2682.44 2258.65 2700.89 2144.03 2695.8 2368.56 2285.12 2180.73 TRUE FALSE 2706.086336 2672.570063 2500.363447 2432.611614 2593.307832 2265.423126 2515.968101 2347.85193 2522.666401 2450.895296 1.104121559 1.090446445 1.020183706 0.992539999 1.058106332 0.924324727 1.026550626 0.957956847 1.029283628 1 11.25909314 -5.292999604 2.235447689 0.996804552 1.106358118 0.549266651 0.035383188 0.232044955 2.16681867 0.009346219 0.031924483 5.09E-06 5.292999604 0.109553566 RPS(ph)VNGEPGSVPPPR ddPTM_A459_MK2206_30min_R2 3 RPSVNGEPGSVPPPR 15 1 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 RPS(1)VNGEPGSVPPPR;RPS(0.73)VNGEPGS(0.27)VPPPR;RPS(0.999)VNGEPGS(0.001)VPPPR 123.42 0.0025942 19978400 25175.9 25454.5 24048.1 26441.7 17440.9 16513 20997.8 15655.7 19204.5 21603.2 TRUE FALSE 27103.38626 24190.46654 24849.85165 24281.32853 16756.08263 17141.41379 18240.76364 17701.95374 20874.8727 20898.28935 1.296918891 1.157533334 1.189085443 1.161881153 0.801792068 0.820230474 0.872835251 0.847052763 0.998879494 1 14.35109723 -6.189265475 5.535654133 0.878449332 1.201813864 0.818209472 0.071848825 0.088614945 5.007182712 0.021268083 0.027547359 6.47E-07 6.189265475 0.323364531 RPSADS(ph)ESPGTPSPDGAAWEPPAR ddPTM_A459_MK2206_30min_R2 1 RPSADSESPGTPSPDGAAWEPPAR 24 1 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 RPS(0.236)ADS(0.398)ES(0.351)PGT(0.014)PS(0.002)PDGAAWEPPAR 44.933 0.037688 4114000 2758.1 3746.1 3937.6 2703.5 2970.3 2673.6 3743.7 2686.7 3245.8 2356.5 TRUE FALSE 2969.262257 3560.074121 4068.877619 2482.615402 2853.671097 2775.345721 3252.147693 3037.860915 3528.113817 2279.607598 1.302532181 1.561704797 1.78490264 1.089053837 1.251825577 1.217466429 1.426626098 1.332624491 1.547684707 1 11.15456979 -5.766518619 24.99977694 1.284349439 1.550912357 0.332975725 0.18248441 151.627134 746306.2639 0.051283581 0.078758723 1.71E-06 5.766518619 0.266562919 RPSAS(ph)SPNNNTAAK ddPTM_A459_MK2206_30min_R1 1 RPSASSPNNNTAAK 14 1 O75151;E7ET14;A0A087WW48 O75151 PHF2 Lysine-specific demethylase PHF2 1 RPS(0.05)AS(0.475)S(0.475)PNNNTAAK 114.58 0.0015055 5440800 1708.7 1953.2 1705 1553 1914.1 2080.9 2164.8 1973.7 978.66 1353.6 TRUE FALSE 1563.366092 1826.046325 1589.26935 1672.612329 1837.857344 2198.71876 2020.390142 1956.444149 1080.395209 1521.294187 1.027655338 1.200324264 1.044682458 1.099466719 1.20808806 1.445294919 1.328073267 1.286039325 0.710181646 1 10.57108345 -8.254762136 24.9992644 0.855090813 1.208160097 0.50765802 0.137788683 410.8319518 1538148.704 0.105739718 0.037880838 5.56E-09 8.254762136 0.353069283 RPSASS(ph)PNNNTAAK ddPTM_A459_MK2206_30min_R1 1 RPSASSPNNNTAAK 14 1 O75151;E7ET14;A0A087WW48 O75151 PHF2 Lysine-specific demethylase PHF2 1 RPS(0.024)AS(0.052)S(0.924)PNNNTAAK 82.865 0.014871 5427400 1692.8 2367.2 2257.8 2107.9 2638.3 1952.8 2195.1 2419.9 1520.1 1811.9 TRUE FALSE 1548.818471 2213.09485 2104.546827 2270.250823 2533.210924 2063.365848 2048.668884 2398.743069 1678.119835 2036.371851 0.760577431 1.086783265 1.033478648 1.114850818 1.243982489 1.013255927 1.006038697 1.177949434 0.82407338 1 10.99178531 -4.758989734 24.99346012 1.065337326 0.76057703 0.397935494 0.108271945 64.54216898 658376.1999 0.026031267 0.171238342 1.74E-05 4.758989734 -0.304760296 RPSASS(ph)PNNNTAAK ddPTM_A459_MK2206_30min_R2 3 RPSASSPNNNTAAK 14 1 O75151;E7ET14;A0A087WW48 O75151 PHF2 Lysine-specific demethylase PHF2 1 RPS(0.007)AS(0.021)S(0.972)PNNNTAAK;RPS(0.293)AS(0.231)S(0.477)PNNNTAAK;RPS(0.089)AS(0.089)S(0.821)PNNNTAAK 98.582 0.0093657 18096400 37185.9 49128.6 42198.9 59554 56500 57592 63401 53641.2 50250.6 52744 TRUE FALSE 40032.8811 46688.94516 43605.79026 54688.2477 54281.52611 59783.70392 55076.37254 60652.28902 54621.30636 51022.9676 0.78460511 0.915057421 0.854630617 1.071835886 1.063864543 1.171701818 1.079442752 1.188725232 1.070523902 1 15.63885919 -5.802081086 3.68387289 1.105560097 0.85382093 0.776081533 0.059168865 0.095108732 2.678796379 0.016231085 0.026558782 1.58E-06 5.802081086 -0.251739167 RPSDS(ph)GPPAER ddPTM_A459_MK2206_30min_R1 1 RPSDSGPPAER 11 1 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 RPS(0.242)DS(0.758)GPPAER 72.815 0.030544 7934600 806.83 675.08 939.75 615.44 1041.2 535.89 666.93 739.05 631.44 521.76 TRUE FALSE 738.2048717 631.1321693 875.9623883 662.8412954 999.7267992 566.2316287 622.4403166 732.5885638 697.0804476 586.3995679 1.258876903 1.076283483 1.493797807 1.130357749 1.704855962 0.965607172 1.061461076 1.24929929 1.188746523 1 9.19574023 RPSEGNEPS(ph)TK ddPTM_A459_MK2206_30min_R1 1 RPSEGNEPSTK 11 1 F2Z329;A0A087WWU1;Q96Q45-2;Q96Q45;Q96Q45-5;Q96Q45-3 F2Z329 TMEM237 Transmembrane protein 237 1 RPS(0.281)EGNEPS(0.659)T(0.059)K 120.6 0.0084091 6167200 4982.1 4469.4 2872.1 2907.8 4053.4 3335.7 3907 3994.9 2762.5 4140.4 TRUE FALSE 4558.346233 4178.441248 2677.149854 3131.75926 3891.944495 3524.564451 3646.371159 3959.97301 3049.671761 4653.34401 0.979585052 0.897943767 0.575317416 0.673012623 0.836375838 0.757426153 0.783602319 0.850995113 0.655372084 1 12.18405213 -9.593483812 10.00792342 1 0.776575424 0.250739929 0.114627189 0 0 0.115157634 0.027929829 2.55E-10 9.593483812 -0.223424576 RPSPS(ph)SQSSSLLTESEQCSLDGKK ddPTM_A459_MK2206_30min_R2 1 RPSPSSQSSSLLTESEQCSLDGKK 24 2 Q5D1E8 Q5D1E8 ZC3H12A Ribonuclease ZC3H12A 1 RPS(0.135)PS(0.712)S(0.135)QS(0.008)S(0.008)S(0.002)LLTESEQCSLDGKK 63.302 0.0016418 4578200 20283 24386 22502 28278 24221 22130 26692 25548 23428 25515 TRUE FALSE 21835.88207 23175.0267 23252.20545 25967.59694 23269.96184 22972.17266 23187.30834 28887.21132 25465.72509 24682.44764 0.884672476 0.938927413 0.94205428 1.052067336 0.942773674 0.930708858 0.939424999 1.170354405 1.031734189 1 14.59119785 -7.733399303 24.99870985 1.075783266 0.949939136 0.483966283 0.056596974 163.3964195 145673.7241 0.026424106 0.015251979 1.85E-08 7.733399303 -0.12584413 RPSS(ph)PVISK ddPTM_A459_MK2206_30min_R2 1 RPSSPVISK 9 1 Q96T17-5;Q96T17;Q96T17-2;Q96T17-4 Q96T17-5 MAP7D2 MAP7 domain-containing protein 2 1 RPS(0.016)S(0.984)PVISK 90.861 0.014366 79905000 54240 60845 54497 76307 63540 65353 73250 56823 53304 74919 TRUE FALSE 58392.6561 57823.52578 56313.90278 70072.47401 61045.10034 67840.05421 63632.18701 64249.9612 57940.28557 72474.39917 0.805700451 0.797847605 0.777017863 0.966858295 0.842298812 0.936055421 0.877995371 0.886519405 0.799458653 1 16.14518385 -2.205402138 0.025926454 1.524037268 8.25E-19 0.356589702 0.059325356 1966.805544 4.40935799 91.60195023 181.3879393 0.006231576 2.205402138 -1.524037268 RPSTSQT(ph)VSTPAPVPVIESTEAIEAK ddPTM_A459_MK2206_30min_R1 1 RPSTSQTVSTPAPVPVIESTEAIEAK 26 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 RPS(0.166)T(0.166)S(0.166)QT(0.41)VS(0.045)T(0.045)PAPVPVIESTEAIEAK 108.94 3.12E-08 4217400 1078.6 1123.3 1303.2 1088.8 1049.7 507.83 833.92 826.41 654.05 582.37 TRUE FALSE 986.859406 1050.172966 1214.742415 1172.659565 1007.888226 536.5828957 778.2907184 819.1847845 722.040838 654.5183923 1.507764209 1.604497258 1.855933201 1.791637299 1.539892902 0.819813319 1.189104428 1.251584057 1.103163557 1 9.354289923 -6.60208475 6.043951629 1.098058052 1.692390498 0.815039471 0.140952849 0.092097539 5.46569011 0.049310164 0.049322529 2.50E-07 6.60208475 0.594332446 RPSTSQTVS(ph)TPAPVPVIESTEAIEAK ddPTM_A459_MK2206_30min_R2 1 RPSTSQTVSTPAPVPVIESTEAIEAK 26 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 RPS(0.019)T(0.019)S(0.019)QT(0.013)VS(0.696)T(0.236)PAPVPVIESTEAIEAK 101.76 6.60E-07 6277600 30790 34301 38572 37891 32175 33263 39332 25827 24639 35188 TRUE FALSE 33147.30607 32597.66222 39857.97123 34795.18409 30911.64783 34528.84677 34167.66115 29202.67758 26782.05568 34039.81844 0.973780343 0.957633257 1.170921969 1.022190649 0.908102606 1.014366361 1.003755681 0.857897572 0.786786091 1 15.05493572 -7.757689618 22.52800167 0.866756315 1.008671885 0.334287572 0.080454073 28.55633707 171575.4901 0.040326737 0.022060914 1.75E-08 7.757689618 0.14191557 RPSTSQTVST(ph)PAPVPVIESTEAIEAK ddPTM_A459_MK2206_30min_R1 1 RPSTSQTVSTPAPVPVIESTEAIEAK 26 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 RPS(0.003)T(0.003)S(0.003)QT(0.002)VS(0.026)T(0.963)PAPVPVIESTEAIEAK 101.71 1.64E-06 9598000 3274.5 3060.1 3096.9 2346.6 2062.9 2595.7 2255.7 2083.9 2415.1 2248.8 TRUE FALSE 2995.98658 2860.886934 2886.691056 2527.335539 1980.730325 2742.666291 2105.226369 2065.680682 2666.158288 2527.398322 1.185403406 1.131949368 1.142159125 0.999975159 0.783703268 1.085173741 0.832961845 0.817315049 1.054902294 1 11.30343734 -5.861647144 3.593023405 0.920659716 1.153217038 0.522672382 0.095285192 0.173477706 4.322921945 0.026767834 0.042349341 1.38E-06 5.861647144 0.232557323 RPSTSQTVST(ph)PAPVPVIESTEAIEAK ddPTM_A459_MK2206_30min_R2 4 RPSTSQTVSTPAPVPVIESTEAIEAK 26 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 RPS(0.007)T(0.007)S(0.007)QT(0.004)VS(0.21)T(0.766)PAPVPVIESTEAIEAK;RPS(0.11)T(0.11)S(0.11)QT(0.197)VS(0.197)T(0.277)PAPVPVIESTEAIEAK;RPS(0.262)T(0.106)S(0.106)QT(0.106)VS(0.093)T(0.327)PAPVPVIESTEAIEAK;RPS(0.132)T(0.132)S(0.132)QT(0.107)VS(0.107)T(0.389)PAPVPVIESTEAIEAK 97.388 4.09E-06 20162700 65450.9 78627.5 58125.2 72352.6 62061.2 57443.6 60651.4 39770.7 50340.22 59748.7 TRUE FALSE 70461.87123 74722.97269 60063.06516 66441.16114 59624.36546 59629.65645 52687.79832 44968.86704 54718.72134 57799.10481 1.219082397 1.292805017 1.039169471 1.149518861 1.031579393 1.031670934 0.911567722 0.77802013 0.946705343 1 15.81875953 -6.184296206 0.673125885 0.888951096 1.261653874 0.701112633 0.077998752 0.468570559 0.441969209 0.049444118 0.101836036 6.54E-07 6.184296206 0.372702778 RPTETNPVTSNS(ph)DEECNETVK ddPTM_A459_MK2206_30min_R1 4 RPTETNPVTSNSDEECNETVK 21 1 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 RPTETNPVTSNS(1)DEECNETVK;RPTETNPVTS(0.003)NS(0.997)DEECNETVK;RPTETNPVTS(0.001)NS(0.999)DEECNETVK;RPTETNPVTSNS(1)DEECNETVK 194.52 9.15E-17 150717000 11893.2 13121.9 12477.6 10266.3 11290.4 11590.4 12136.3 10633.6 12395.5 11738.2 TRUE FALSE 10881.62089 12267.66192 11630.65528 11057.0122 10840.67946 12246.63843 11326.70957 10540.63156 13684.05658 13192.41683 0.824839074 0.92990254 0.881616721 0.838133933 0.821735668 0.928308936 0.858577296 0.7989917 1.037266845 1 13.68742127 -8.272029602 24.99002366 1.018633454 0.863486423 0.69349671 0.042070586 447.8850266 1056874.082 0.039126371 0.010529795 5.35E-09 8.272029602 -0.155147031 RPTETNPVTSNS(ph)DEECNETVK ddPTM_A459_MK2206_30min_R2 4 RPTETNPVTSNSDEECNETVK 21 1 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 RPTETNPVTS(0.002)NS(0.998)DEECNETVK;RPTETNPVTSNS(1)DEECNETVK;RPTETNPVTS(0.001)NS(0.999)DEECNETVK;RPTETNPVTS(0.016)NS(0.984)DEECNETVK 199.87 5.86E-17 371732000 200249 207105 191517 227638 190476 148689 227932 190580 147974 207870 TRUE FALSE 215580.2174 196820.4669 197902.0812 209039.2472 182996.9552 154347.4641 198004.2546 215489.4604 160844.511 201087.2189 1.072073196 0.978781585 0.984160417 1.03954517 0.910037725 0.767564766 0.984668522 1.071621864 0.799874363 1 17.61746186 -6.267312095 24.30143872 0.921257839 1.013330223 0.222358187 0.088030922 565.7270219 2340986.818 0.027766318 0.032331578 5.40E-07 6.267312095 0.092072384 RPTETNPVTSNS(ph)DEECNETVKEK ddPTM_A459_MK2206_30min_R1 2 RPTETNPVTSNSDEECNETVKEK 23 2 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 RPTETNPVT(0.012)S(0.244)NS(0.744)DEECNETVKEK;RPT(0.001)ET(0.001)NPVT(0.068)S(0.092)NS(0.832)DEECNET(0.007)VKEK 92.805 0.00013347 25442000 1073.56 1033.51 1383.38 954.09 774.99 822.66 1014.59 876.2 772.69 594.62 TRUE FALSE 982.2480845 966.2283112 1289.48002 1027.574177 744.1205072 869.2382983 946.9085523 868.5394758 853.0138906 668.2860148 1.469801945 1.445830512 1.929533151 1.537626337 1.113476103 1.300698023 1.416921096 1.299652329 1.276420383 1 9.384321873 -7.442842022 0.22076198 0.931671848 1.741152736 0.45330718 0.177989944 2.984030792 0.549361768 0.627987734 0.923346442 3.61E-08 7.442842022 0.809480889 RPTPNDDTLDEGVGLVHS(ph)NIATEHIPSPAKK ddPTM_A459_MK2206_30min_R2 1 RPTPNDDTLDEGVGLVHSNIATEHIPSPAKK 31 2 Q01581 Q01581 HMGCS1 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic" 1 RPTPNDDTLDEGVGLVHS(0.524)NIAT(0.132)EHIPS(0.344)PAKK 63.893 0.00019365 16112000 22283 26846 29863 24072 38709 21239 30162 23470 24434 36719 TRUE FALSE 23989.00361 25512.86668 30858.61752 22105.2406 37189.09016 22047.26503 26201.69317 26537.60958 26559.22515 35520.86204 0.675349703 0.718250212 0.868746301 0.622317121 1.046964742 0.620684965 0.737642379 0.747099256 0.747707787 1 15.11637897 -11.34184229 2.300955101 1.09332905 0.756352709 0.277265917 0.119156484 11658958.31 6713401.797 6028019.058 0.029105444 4.55E-12 11.34184229 -0.336976341 RPTPNDDTLDEGVGLVHSNIAT(ph)EHIPSPAK ddPTM_A459_MK2206_30min_R1 1 RPTPNDDTLDEGVGLVHSNIATEHIPSPAK 30 1 Q01581 Q01581 HMGCS1 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic" 1 RPTPNDDTLDEGVGLVHS(0.004)NIAT(0.6)EHIPS(0.396)PAK 116.7 7.81E-16 31146000 15435 17049 17175 14948 14818 13158 14045 14480 13870 14417 TRUE FALSE 14122.1722 15939.107 16009.20885 16099.29755 14227.76768 13902.99459 13108.08368 14353.40289 15311.83613 16203.0868 0.871572952 0.983708055 0.988034505 0.993594477 0.87808995 0.858046048 0.808986821 0.885843732 0.944995007 1 13.98398106 -6.272867674 24.49140159 0.884038059 0.963033751 0.204053739 0.058190495 721.316192 1545813.43 0.018099404 0.020697531 5.33E-07 6.272867674 0.078995693 RPTPNDDTLDEGVGLVHSNIAT(ph)EHIPSPAK ddPTM_A459_MK2206_30min_R2 1 RPTPNDDTLDEGVGLVHSNIATEHIPSPAK 30 1 Q01581 Q01581 HMGCS1 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic" 1 RPTPNDDTLDEGVGLVHS(0.158)NIAT(0.485)EHIPS(0.357)PAK 54.717 0.0031394 51248000 51087 56328 54030 60741 73882 52724 68847 50658 49067 66454 TRUE FALSE 54998.26 53530.83343 55831.33323 55778.266 70981.02145 54730.44877 59807.3062 57279.17453 53334.75897 64285.61142 0.855529858 0.832703186 0.868488796 0.867663304 1.104150989 0.851363899 0.930337363 0.891010807 0.829653134 1 15.97220825 -6.025496203 24.99592097 0.930185219 0.853251675 0.216102076 0.073247493 1232.173204 1207994.301 0.021705413 0.028143773 9.43E-07 6.025496203 -0.076933544 RPTPNDDTLDEGVGLVHSNIATEHIPS(ph)PAK ddPTM_A459_MK2206_30min_R1 4 RPTPNDDTLDEGVGLVHSNIATEHIPSPAK 30 1 Q01581 Q01581 HMGCS1 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic" 1 RPTPNDDTLDEGVGLVHS(0.001)NIAT(0.19)EHIPS(0.809)PAK;RPTPNDDTLDEGVGLVHSNIAT(0.007)EHIPS(0.992)PAK;RPTPNDDTLDEGVGLVHS(0.002)NIAT(0.235)EHIPS(0.763)PAK;RPTPNDDTLDEGVGLVHS(0.003)NIAT(0.331)EHIPS(0.666)PAK 114.74 1.20E-15 148654000 20635.7 22860 23907.4 20173.9 18175.2 17715.7 19196.5 19859.8 19512.3 19275.5 TRUE FALSE 18880.52535 21371.80985 22284.6323 21727.69727 17451.2433 18718.74762 17915.93651 19686.16786 21540.67341 21663.49446 0.871536464 0.986535662 1.028672098 1.002963641 0.80555994 0.864068706 0.82701046 0.908725409 0.994330506 1 14.40297836 -4.462563166 12.0976473 0.927907099 0.569196461 0.051417492 0.076436957 160644.1384 1229326.104 0.020999003 1301427.785 3.45E-05 4.462563166 -0.358710638 RPTPNDDTLDEGVGLVHSNIATEHIPS(ph)PAK ddPTM_A459_MK2206_30min_R2 3 RPTPNDDTLDEGVGLVHSNIATEHIPSPAK 30 1 Q01581 Q01581 HMGCS1 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic" 1 RPTPNDDTLDEGVGLVHS(0.023)NIAT(0.031)EHIPS(0.946)PAK;RPTPNDDTLDEGVGLVHS(0.001)NIAT(0.256)EHIPS(0.743)PAK;RPTPNDDTLDEGVGLVHS(0.009)NIAT(0.023)EHIPS(0.967)PAK 96.133 6.26E-08 126968000 216708 230122 223432 235181 278058 201414 299299 230386 202476 284907 TRUE FALSE 233299.3311 218694.4761 230881.1114 215965.96 267140.0458 209078.9509 260000.6818 260498.2412 220086.9965 275610.5079 0.84648199 0.793491067 0.837707942 0.783591169 0.969266549 0.758602974 0.943362732 0.945168031 0.798543561 1 18.07227137 -14.52287874 0.07990935 1.480412321 0.709755189 0.310809394 0.069537208 294.8284202 1.66216104 24.94597858 2.321193749 3.00E-15 14.52287874 -0.770657133 RPTPNDDTLDEGVGLVHSNIATEHIPS(ph)PAKK ddPTM_A459_MK2206_30min_R1 1 RPTPNDDTLDEGVGLVHSNIATEHIPSPAKK 31 2 Q01581 Q01581 HMGCS1 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic" 1 RPTPNDDTLDEGVGLVHS(0.029)NIAT(0.067)EHIPS(0.904)PAKK 70.983 6.54E-05 16040000 5028.7 5387.9 6661.7 5295 4871 4343.6 4927.9 5091.9 4587.3 4671.7 TRUE FALSE 4600.982658 5037.146731 6209.522365 5702.821817 4676.977755 4589.530878 4599.168782 5047.382055 5064.166251 5250.465466 0.876299956 0.959371462 1.18266131 1.086155476 0.89077393 0.874118858 0.875954487 0.961320875 0.964517581 1 12.35822961 -6.268982446 24.87931164 0.920572568 1.032535528 0.244856327 0.083733132 770.4018409 2541013.374 0.028021702 0.032415523 5.38E-07 6.268982446 0.11196296 RPTPNDDTLDEGVGLVHSNIATEHIPS(ph)PAKK ddPTM_A459_MK2206_30min_R2 1 RPTPNDDTLDEGVGLVHSNIATEHIPSPAKK 31 2 Q01581 Q01581 HMGCS1 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic" 1 RPTPNDDTLDEGVGLVHS(0.035)NIAT(0.091)EHIPS(0.874)PAKK 51.621 0.0044569 9153200 18466 20681 21961 21158 24657 14218 25747 22383 15462 27592 TRUE FALSE 19879.77116 19654.01161 22693.16878 19429.32372 23688.84229 14759.07595 22366.38797 25308.53495 16806.85681 26691.6753 0.744792934 0.736334883 0.850196495 0.727916982 0.887499268 0.552946782 0.837953696 0.948180834 0.629666614 1 14.70410224 -11.39899499 2.758608358 1.103224904 0.7731616 0.274390766 0.112752236 25374952.14 18858548.14 17186229.11 0.027341581 3.99E-12 11.39899499 -0.330063304 RPTPQDS(ph)PIFLPVDDTSFR ddPTM_A459_MK2206_30min_R2 1 RPTPQDSPIFLPVDDTSFR 19 1 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 RPT(0.007)PQDS(0.993)PIFLPVDDTSFR 51.39 0.040675 3175900 14004 15463 12276 14325 12440 12390 14680 9124.5 12126 11532 TRUE FALSE 15076.15701 14695.12991 12685.27571 13154.60168 11951.54309 12861.51013 12752.49837 10317.10348 13180.69756 11155.71178 1.351429411 1.317274074 1.137110384 1.179180848 1.071338461 1.152908069 1.143136235 0.924827001 1.181520087 1 13.44549495 -1.522878746 0.326531375 1.041478026 4.450087242 0.641377331 0.07330518 34.53312632 0.492151129 0.064620476 70.77976919 0.03 1.522878746 3.408609217 RPTWAEER ddPTM_A459_MK2206_30min_R1 2 RPTWAEER 8 1 Q8ND56-3;Q8ND56-2;Q8ND56;A0A0G2JQ95;A0A096LP11;A0A140TA76 Q8ND56-3;A0A140TA76 LSM14A Protein LSM14 homolog A 0 ; 112.11 0.015307 8138100 2908.5 2503.2 3380.6 3045.2 3302.6 2910.9 3726.6 3093.1 2653.4 2376.8 FALSE TRUE 2661.116802 2340.241225 3151.134291 3279.741832 3171.050449 3075.712642 3478.005314 3066.057353 2929.230425 2671.255928 0.99620436 0.876082745 1.179645222 1.227790193 1.18710095 1.151410694 1.302011266 1.147796181 1.096574235 1 11.38330249 -5.269620678 24.99903551 1.174753419 0.93614355 0.553980642 0.080200234 350.3191421 1070448.68 0.020125997 0.043053994 5.38E-06 5.269620678 -0.238609869 RPTWAEER ddPTM_A459_MK2206_30min_R2 2 RPTWAEER 8 1 Q8ND56-3;Q8ND56-2;Q8ND56;A0A0G2JQ95;A0A096LP11;A0A140TA76 Q8ND56-3;A0A140TA76 LSM14A Protein LSM14 homolog A 0 ; 90.15 0.040882 9441000 26661 33828 32910 36153 31788 40196 34980 29049 29072 32351 FALSE TRUE 28702.18666 32148.15071 34007.20297 33199.18425 30539.8434 41725.68695 30387.08398 32845.80404 31600.63001 31295.38952 0.917137863 1.02724878 1.086652171 1.060833074 0.97585759 1.333285432 0.970976379 1.049541308 1.009753529 1 14.93366251 -4.794306908 2.864107239 1.065996612 0.89304213 0.159279451 0.098443231 0.721112779 8.459193007 0.024844089 0.291272051 1.61E-05 4.794306908 -0.172954482 RPVS(ph)AIFTESIQPQKPGPGAAATVGK ddPTM_A459_MK2206_30min_R1 1 RPVSAIFTESIQPQKPGPGAAATVGK 26 2 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 RPVS(1)AIFTESIQPQKPGPGAAATVGK 89.631 1.95E-05 11039000 1716.6 1701.8 2159 1617.6 1905.1 1945.4 1744.3 1692.7 1907.9 1649.5 TRUE FALSE 1570.594156 1591.012511 2012.453095 1742.187832 1829.215833 2055.546867 1627.94093 1677.900902 2106.233032 1853.852513 0.84720556 0.858219572 1.085551888 0.939766146 0.98671055 1.108797411 0.878139398 0.905088668 1.136138402 1 10.85631076 -5.187738503 9.306928436 0.997776296 0.851797615 0.358675679 0.081010062 0.510937557 61.33829347 0.020388039 0.054199828 6.49E-06 5.187738503 -0.14597868 RPVS(ph)FPETPYTVSPAGADR ddPTM_A459_MK2206_30min_R1 2 RPVSFPETPYTVSPAGADR 19 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 RPVS(0.976)FPET(0.024)PYTVSPAGADR;RPVS(0.971)FPET(0.026)PYT(0.003)VSPAGADR 94.188 0.0033483 30101900 1562.55 1708.16 1677.49 1718.61 2016.78 2769.08 2904.43 2617.62 3124.49 3778.8 TRUE FALSE 1429.646917 1596.958474 1563.626653 1850.97764 1936.447382 2925.862917 2710.680774 2594.734424 3449.291917 4246.946272 0.336629386 0.376025118 0.368176697 0.43583731 0.455962298 0.688933349 0.63826585 0.61096474 0.81218167 1 12.05221014 -7.518883567 0.267235871 1.064406473 0.207859027 0.931776471 0.054024573 0.494182439 0.120877026 0.117585654 0.158965126 3.03E-08 7.518883567 -0.856547446 down RPVS(ph)FPETPYTVSPAGADR ddPTM_A459_MK2206_30min_R2 3 RPVSFPETPYTVSPAGADR 19 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 RPVS(0.969)FPET(0.022)PYT(0.008)VS(0.002)PAGADR;RPVS(0.978)FPET(0.022)PYTVSPAGADR;RPVS(0.993)FPET(0.007)PYTVSPAGADR 113.89 0.00026267 22817600 17052.1 19758.5 19705.2 16404.5 28148.5 30257.2 49427 35063.6 31862.9 46191 TRUE FALSE 18357.62189 18777.32162 20362.16153 15064.19987 27043.24846 31408.65895 42937.17553 39646.53291 34634.27745 44683.79145 0.410834025 0.420226686 0.455694579 0.337128954 0.605213828 0.702909443 0.960911645 0.887268775 0.775097106 1 15.44746398 -6.761243986 1.740717548 0.895815015 0.410797323 0.906103801 0.071289098 0.097992264 0.614233819 0.029230069 0.026681037 1.73E-07 6.761243986 -0.485017692 RPWRPEEAVEDPDEEDEDNT(ph)SEAENGFSLEEVLR ddPTM_A459_MK2206_30min_R1 1 RPWRPEEAVEDPDEEDEDNTSEAENGFSLEEVLR 34 2 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 RPWRPEEAVEDPDEEDEDNT(0.5)S(0.5)EAENGFSLEEVLR 74.876 1.23E-05 5973800 702.38 549.22 621.79 442.91 631.75 626.47 541.01 630.61 559.29 564.76 TRUE FALSE 642.6388927 513.4656782 579.5846272 477.0230049 606.5860597 661.94019 504.92021 625.0966433 617.4301969 634.7267325 1.012465459 0.808955495 0.913124653 0.751540751 0.955664901 1.042874289 0.795492271 0.984827976 0.972749634 1 9.309991795 -6.412523404 19.62304868 0.953956307 0.867963812 0.190809145 0.087410137 8.691517101 1528.724827 0.02638375 0.029916298 3.87E-07 6.412523404 -0.085992495 RQAS(ph)ESSSRPH ddPTM_A459_MK2206_30min_R2 2 RQASESSSRPH 11 2 A0A2R8Y653;Q9BZX2-2;Q9BZX2 A0A2R8Y653 UCK2 Uridine-cytidine kinase 2 1 RQAS(0.999)ES(0.001)SSRPH;RQAS(0.999)ESSSRPH 84.734 0.040541 9729800 5943.6 2353.66 4163.44 5132.8 10814.6 8403.3 14266.5 66057 43834 14867.1 TRUE FALSE 6398.646586 2236.780667 4302.247012 4713.433821 10389.96446 8723.09347 12393.29141 74690.87671 47646.60209 14381.98774 0.44490697 0.155526531 0.299141335 0.327731737 0.722428961 0.606529057 0.861723124 5.193362561 3.312935801 1 13.81197546 -7.635344227 7.279927572 3.424573492 0.444320158 0.618621604 0.962563669 0.12515901 7.503498472 0.430834499 0.246771284 2.32E-08 7.635344227 -2.980253334 RQATVSWDSGGSDEAPPKPS(ph)RPGYPSPR ddPTM_A459_MK2206_30min_R2 1 RQATVSWDSGGSDEAPPKPSRPGYPSPR 28 3 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;H0YBZ1;H0YB16;Q05397-6;B4DWJ1;E5RHK7;E5RG80;E5RJQ2;E9PEI4 E7ESA6;E9PEI4 PTK2 Focal adhesion kinase 1 1 RQATVSWDSGGS(0.002)DEAPPKPS(0.345)RPGY(0.307)PS(0.345)PR 47.175 0.029985 9196100 6359 16999 12663 17537 21455 16459 14640 8350.1 18635 9945.7 TRUE FALSE 6845.849929 16154.85438 13085.1781 16104.171 20612.5689 17085.35878 12717.75041 9441.48674 20255.83862 9621.172624 0.711540079 1.67909412 1.360039843 1.67382622 2.142417531 1.77580836 1.321850351 0.98132391 2.105339901 1 13.23199702 -11.07243488 3.17360637 0.980223375 1.534943566 0.119040254 0.430458859 2235138300 2472110162 375908186.1 0.107686971 8.46E-12 11.07243488 0.554720192 RQDLYSAR ddPTM_A459_MK2206_30min_R2 2 RQDLYSAR 8 1 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 0 ; 134.77 0.0036857 2377700 10046.7 12540.3 11367.5 14759.9 13091.3 14517.1 14296.1 14532 12482.5 12648.1 FALSE TRUE 10815.88308 11917.56694 11746.48678 13553.96896 12577.26978 15069.55841 12419.0049 16431.3823 13568.20529 12235.39353 0.883983261 0.974023999 0.960041599 1.107767308 1.027941582 1.231636594 1.015006576 1.342938603 1.108930845 1 13.57877288 -5.679471477 0.842465936 1.152579221 0.882464627 0.40079729 0.100610898 0.810010316 0.985379684 0.04173809 0.160880692 2.09E-06 5.679471477 -0.270114595 RQDNQNDDS(ph)EEHDDGGYR ddPTM_A459_MK2206_30min_R2 1 RQDNQNDDSEEHDDGGYR 18 1 Q9NUP7 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog 1 RQDNQNDDS(1)EEHDDGGYR 128.38 0.00035015 2624900 2482.3 3180.8 2759.1 3283.3 2164.6 2913.5 2864.3 2715.2 3831.2 3005 TRUE FALSE 2672.346797 3022.846097 2851.087017 3015.043887 2079.606928 3024.375284 2488.213969 3070.085963 4164.430851 2906.947096 0.919296674 1.039869663 0.980783937 1.037185675 0.715392079 1.040395709 0.855954335 1.056120342 1.432578823 1 11.5052891 -8.008298748 22.64290071 1.225642923 0.946154793 0.395873031 0.135275915 96.12097793 262258.3285 0.074547869 0.032959252 9.81E-09 8.008298748 -0.27948813 RQDPQVVS(ph)PFSR ddPTM_A459_MK2206_30min_R2 3 RQDPQVVSPFSR 12 1 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 RQDPQVVS(0.998)PFS(0.002)R;RQDPQVVS(0.677)PFS(0.323)R;RQDPQVVS(0.765)PFS(0.235)R 116.79 0.007549 14833800 41918.6 51995.9 37207.6 46358.4 44439.1 41986.5 45107.4 36328.7 37068.9 43411.4 TRUE FALSE 45127.92025 49413.85922 38448.08281 42570.77043 42694.19765 43584.32568 39184.7442 41076.98583 40293.08592 41994.88957 1.074605046 1.17666363 0.915541943 1.013713117 1.016652218 1.037848322 0.933083635 0.978142489 0.959475934 1 15.35792615 -5.257233616 24.99899378 0.983671884 1.125634342 0.644807215 0.04268107 211.0564267 1254503.969 0.010854035 0.026624708 5.53E-06 5.257233616 0.141962458 RQDS(ph)AGPVLDGAR ddPTM_A459_MK2206_30min_R2 2 RQDSAGPVLDGAR 13 1 Q0VF96 Q0VF96 CGNL1 Cingulin-like protein 1 1 RQDS(1)AGPVLDGAR;RQDS(1)AGPVLDGAR 88.637 0.01208 11346900 24347 21181.5 24601 24504 24444 25887 28219 22166 15543.2 33619 TRUE FALSE 26211.02504 20129.65751 25421.18506 22501.94482 23484.20574 26872.14792 24513.8114 25063.17231 16895.11944 32522.01478 0.805947147 0.618954811 0.78166083 0.691898856 0.72210181 0.82627562 0.753760539 0.77065251 0.519497932 1 14.98912902 -6.568660163 24.99761207 0.760186144 0.719374691 0.035069002 0.119236563 605.6496383 330693.4319 0.037485918 0.037485931 2.70E-07 6.568660163 -0.040811453 RQDS(ph)MEALQMDR ddPTM_A459_MK2206_30min_R1 2 RQDSMEALQMDR 12 1 Q8TDR0-2;Q8TDR0 Q8TDR0-2 TRAF3IP1 TRAF3-interacting protein 1 1 RQDS(1)MEALQMDR;RQDS(1)MEALQMDR 177.36 0.00018612 33609000 8064.3 8092.9 8745.3 7595.4 9078 8477.7 9213.1 8045.4 7974.5 7317.4 TRUE FALSE 7378.388938 7566.050739 8151.693402 8180.399024 8716.404037 8957.700048 8598.510909 7975.059916 8803.477812 8223.934756 0.897184761 0.920003741 0.991215719 0.994706216 1.05988244 1.089223141 1.045547073 0.969737741 1.070470289 1 13.0056131 -5.377495884 1.350625771 1.03865887 0.888452579 0.688149172 0.033707738 0.335842788 1.025660534 0.011114686 0.051128047 4.19E-06 5.377495884 -0.150206291 RQDS(ph)MEALQMDR ddPTM_A459_MK2206_30min_R2 2 RQDSMEALQMDR 12 1 Q8TDR0-2;Q8TDR0 Q8TDR0-2 TRAF3IP1 TRAF3-interacting protein 1 1 RQDS(1)MEALQMDR;RQDS(1)MEALQMDR 236.42 7.21E-13 48752000 111279 152211 127622 143025 158828 148147 134898 122948 111747 126200 TRUE FALSE 119798.6058 144652.4231 131876.8538 131339.4 152591.6147 153784.8379 117185.7306 139017.7257 121466.5521 122082.1043 0.981295387 1.184878192 1.080230837 1.075828441 1.249909768 1.259683708 0.95989278 1.13872321 0.994957883 1 16.89749221 -7.277035446 24.99390065 1.034953745 1.140287564 0.280057092 0.089735606 1280.793278 2052562.44 0.038191496 0.025844625 5.28E-08 7.277035446 0.105333819 RQDSDLVQCGVT(ph)SPSSAEATGK ddPTM_A459_MK2206_30min_R1 1 RQDSDLVQCGVTSPSSAEATGK 22 1 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 1 RQDSDLVQCGVT(0.354)S(0.354)PS(0.143)S(0.143)AEAT(0.005)GK 80.752 0.0014157 16375000 4107.2 4571.6 4021.2 3773.6 3757.2 3119.9 3885.8 4278 4238.1 3942.2 TRUE FALSE 3757.861072 4273.988009 3748.252148 4064.243326 3607.542768 3296.546042 3626.585372 4240.597897 4678.665661 4430.589498 0.848162772 0.96465448 0.845994004 0.91731435 0.81423539 0.744042309 0.818533374 0.957118212 1.055991683 1 12.11328295 -7.948678615 4.172316351 1.023834183 0.852221081 0.614973215 0.057502972 0.153259419 5.539298783 0.039346798 0.016944092 1.13E-08 7.948678615 -0.171613102 RQDSDLVQCGVTS(ph)PSSAEATGK ddPTM_A459_MK2206_30min_R1 1 RQDSDLVQCGVTSPSSAEATGK 22 1 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 1 RQDSDLVQCGVT(0.05)S(0.741)PS(0.08)S(0.128)AEAT(0.001)GK 124.73 1.65E-05 20710000 6798.9 6869.9 6704.8 6109.6 6279.9 5447.3 5843.8 5972.4 5261.7 4942.4 TRUE FALSE 6220.617853 6422.668261 6249.696857 6580.162451 6029.758285 5755.721419 5453.970765 5920.183936 5808.672544 5554.701825 1.119883308 1.156257971 1.125118333 1.184611282 1.085523305 1.036189088 0.981865622 1.065796891 1.045721756 1 12.43949375 -6.565341931 3.190848179 1.027259918 1.145477483 0.808304451 0.027601396 0.106420588 2.230099583 0.009485547 0.009816795 2.72E-07 6.565341931 0.118217564 RQDSDLVQCGVTS(ph)PSSAEATGK ddPTM_A459_MK2206_30min_R2 2 RQDSDLVQCGVTSPSSAEATGK 22 1 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 1 RQDSDLVQCGVT(0.041)S(0.691)PS(0.134)S(0.134)AEAT(0.001)GK;RQDSDLVQCGVT(0.013)S(0.961)PS(0.013)S(0.013)AEATGK 116.55 1.72E-05 51325000 51573 51868 49700 49839 48043 41239 53066 39891 43211 48510 TRUE FALSE 55521.46853 49292.31054 51356.97319 45766.99427 46156.59042 42808.37904 46098.37046 45104.89067 46969.41467 46927.12267 1.1831424 1.050401297 1.094398511 0.975278084 0.983580237 0.912231064 0.98233959 0.961168895 1.000901227 1 15.51813438 -4.896614633 0.813964254 0.966728117 1.257785546 0.757903039 0.035935188 1.027586114 0.586907282 0.013599024 0.262490296 1.27E-05 4.896614633 0.291057428 RQEAIAQNR ddPTM_A459_MK2206_30min_R2 4 RQEAIAQNR 9 1 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 0 ;;; 140.45 0.0031018 3513220 8193.5 6036.63 8633.58 8089.2 8785.9 6071.38 8293.2 9560.9 7946.2 9370.6 FALSE TRUE 8820.80066 5736.859732 8921.419248 7428.286484 8440.92142 6302.43062 7204.292878 10810.54246 8637.346113 9064.838089 0.973078677 0.63286952 0.984178555 0.819461573 0.93117178 0.695261246 0.794751413 1.192579763 0.952840638 1 13.14606554 -7.744155761 24.99999694 1.054532676 0.829048465 0.401160016 0.120525833 210.8310994 304958.7779 0.053828723 0.030981793 1.80E-08 7.744155761 -0.225484212 RQEEEDLLR ddPTM_A459_MK2206_30min_R1 2 RQEEEDLLR 9 1 Q70UQ0-4 Q70UQ0-4 0 ; 140.11 0.003141 5820500 3010.6 2544.4 2848.6 2225.29 2955.6 2271.4 3256.7 2463.1 3005.7 3293.1 FALSE TRUE 2754.532661 2378.759098 2655.244969 2396.682221 2837.872193 2400.004705 3039.451485 2441.565376 3318.153271 3701.07409 0.744252234 0.642721286 0.717425511 0.647563967 0.766769896 0.648461675 0.821234974 0.659691029 0.896537921 1 11.8537283 -8.437048273 3.517781333 0.998432098 0.706429417 0.75313782 0.056800302 0.095503045 2.215196484 0.050531937 0.01338185 3.66E-09 8.437048273 -0.29200268 RQEEEDLLR ddPTM_A459_MK2206_30min_R2 1 RQEEEDLLR 9 1 Q70UQ0-4 Q70UQ0-4 0 107.21 0.017215 2752800 19602 21361 22268 22781 21242 25481 24408 19322 21167 25894 FALSE TRUE 21102.74419 20300.2438 23010.40401 20919.71943 20407.93235 26450.69731 21203.20028 21847.45174 23008.0674 25049.0809 0.842455828 0.810418709 0.918612707 0.835149182 0.814717811 1.055954804 0.846466198 0.872185763 0.918519426 1 14.61247005 RQEELDR ddPTM_A459_MK2206_30min_R2 2 RQEELDR 7 1 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 0 ; 132.08 0.0050224 4856300 12830 13669.2 10970.8 10818.4 14360.9 14292.5 12306 17854.5 20036.5 12294.4 FALSE TRUE 13812.27466 12990.4074 11336.561 9934.502114 13797.01891 14836.4111 10690.20742 20188.14445 21779.23855 11893.23473 1.161355592 1.09225183 0.953194085 0.83530699 1.160072866 1.247466432 0.898847761 1.697447743 1.831229185 1 13.53785353 -7.763322161 24.99994481 1.573253929 1.051299171 0.43788677 0.235418186 40.19119084 533636.1585 0.11716128 0.060787298 1.72E-08 7.763322161 -0.521954757 RQELEAELAK ddPTM_A459_MK2206_30min_R1 1 RQELEAELAK 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 103.08 0.019754 3298700 3136.2 2916.4 2796.7 2807 2478.3 2733.9 2481.9 2763.3 2700.7 1959.7 FALSE TRUE 2869.449721 2726.54183 2606.867796 3023.195626 2379.584063 2888.691055 2316.336979 2739.140759 2981.44743 2202.482431 1.302825249 1.237940331 1.183604355 1.372630984 1.080410009 1.311561452 1.051693737 1.243660663 1.353675919 1 11.1049148 -6.262041245 24.99999908 1.186496064 1.265181955 0.149045194 0.114640429 136.2654259 5660142.633 0.033594525 0.040374346 5.47E-07 6.262041245 0.078685891 RQEQPSIEST(ph)SPISR ddPTM_A459_MK2206_30min_R2 1 RQEQPSIESTSPISR 15 1 Q5T5P2-3;Q5T5P2 Q5T5P2-3 KIAA1217 Sickle tail protein homolog 1 RQEQPSIES(0.035)T(0.478)S(0.478)PIS(0.008)R 79.326 0.039056 9433300 18532 26451 23474 31721 26013 27240 36129 25887 26501 31180 TRUE FALSE 19950.82417 25137.4818 24256.61144 29129.29283 24991.59892 28276.63729 31385.2189 29270.51978 28806.00908 30162.59915 0.661442473 0.833399061 0.804195001 0.965742133 0.828562512 0.937473496 1.040534297 0.97042432 0.955024099 1 14.88047313 -3.540195961 0.378513495 0.995324255 7.23E-18 0.76506976 0.052894014 7.338780735 0.399412539 0.043081136 4.014999491 0.000288273 3.540195961 -0.995324255 RQEQPSIESTS(ph)PISR ddPTM_A459_MK2206_30min_R1 2 RQEQPSIESTSPISR 15 1 Q5T5P2-3;Q5T5P2 Q5T5P2-3 KIAA1217 Sickle tail protein homolog 1 RQEQPSIES(0.001)T(0.442)S(0.556)PISR;RQEQPS(0.001)IES(0.025)T(0.222)S(0.752)PISR 187.08 3.72E-05 16130300 3184.3 3443.5 3083.3 2869.5 4024.5 3593.8 3287.4 3292.4 2688.2 2285.7 TRUE FALSE 2913.458564 3219.327524 2874.014187 3090.509387 3864.195643 3797.27785 3068.103544 3263.614894 2967.64801 2568.869772 1.134140234 1.253207757 1.118785474 1.203061915 1.504239602 1.478190094 1.194339852 1.270447778 1.155234898 1 11.32691804 -8.5784132 1.729068228 1.000255032 1.276713998 0.319781278 0.122611683 0.572313864 3.79607372 0.129734803 0.037062158 2.64E-09 8.5784132 0.276458965 RQFS(ph)APNLK ddPTM_A459_MK2206_30min_R2 1 RQFSAPNLK 9 1 O60333-3 O60333-3 KIF1B Kinesin-like protein KIF1B 1 RQFS(1)APNLK 66.538 0.043614 3285600 13483 25042 20361 19594 23464 22579 25586 20052 17584 22868 TRUE FALSE 14515.26885 23798.45069 21039.82558 17993.10752 22542.68546 23438.25967 22226.52747 22672.86525 19113.42454 22121.81903 0.656151686 1.075790859 0.951089309 0.813364737 1.019024947 1.059508697 1.004733265 1.024909625 0.864007815 1 14.4331824 -6.285049501 24.505867 1.000285241 0.894004986 0.215141564 0.110651765 1080.751327 1121750.352 0.033738808 0.038278176 5.19E-07 6.285049501 -0.106280256 RQFS(ph)PGPR ddPTM_A459_MK2206_30min_R2 1 RQFSPGPR 8 1 Q5T321;A0A0D9SF28;F5GXV7;Q8NFP9 Q5T321 NBEA Neurobeachin 1 RQFS(1)PGPR 80.916 0.039327 0 7206.4 12935 8247.8 8615.3 6718.6 11768 8398.2 6294.8 13896 9818.3 TRUE FALSE 7758.127525 12292.66671 8522.777535 7911.402431 6454.794006 12215.83949 7295.506252 7117.551973 15104.64896 9497.929675 0.816823012 1.294246971 0.897330032 0.83296073 0.679600105 1.286158132 0.768115421 0.749379309 1.590309623 1 13.21339736 -8.249761102 24.99941588 1.29515485 0.924408419 0.284729627 0.24032074 832.8825213 1782941.567 0.160542147 0.059576577 5.63E-09 8.249761102 -0.370746431 RQGLAETAS(ph)PVAVSLR ddPTM_A459_MK2206_30min_R1 2 RQGLAETASPVAVSLR 16 1 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 RQGLAETAS(0.998)PVAVS(0.002)LR;RQGLAETAS(1)PVAVSLR 101.53 0.0027858 17479000 4427.1 3941.5 4474.3 3663.3 4009.9 3125.8 3322.9 3402.5 3177.6 2710.7 TRUE FALSE 4050.551897 3684.907634 4170.596982 3945.448001 3850.177192 3302.780095 3101.235404 3372.752301 3507.922891 3046.521981 1.329565952 1.209545724 1.36896993 1.295066317 1.263794326 1.084114973 1.017959307 1.107082871 1.151451693 1 11.57294743 -6.729483964 4.048546556 1.073507361 1.296785668 0.806283401 0.054462982 0.094724023 3.365029438 0.019028271 0.018202172 1.86E-07 6.729483964 0.223278307 RQGLAETAS(ph)PVAVSLR ddPTM_A459_MK2206_30min_R2 2 RQGLAETASPVAVSLR 16 1 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 RQGLAETAS(0.999)PVAVS(0.001)LR;RQGLAETAS(0.998)PVAVS(0.002)LR 153.58 7.13E-05 26609000 34594 65560 46024 59203 66258 75668 57057 38458 64254 54302 TRUE FALSE 37242.54324 62304.38573 47558.41719 54365.92552 63656.378 78547.59876 49565.34736 43484.59265 69842.69678 52530.13019 0.708974889 1.186069509 0.905355022 1.034947473 1.211806972 1.495286581 0.943560337 0.827802872 1.329574028 1 15.68085754 -4.753699495 24.85977373 1.100686492 0.708974131 0.269804609 0.194808797 384.4017175 1234553.773 0.049991855 0.522482848 1.76E-05 4.753699495 -0.391712361 RQGS(ph)FSEDVISHK ddPTM_A459_MK2206_30min_R1 2 RQGSFSEDVISHK 13 1 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390;E9PNZ4 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 RQGS(0.819)FS(0.181)EDVISHK;RQGS(0.956)FS(0.044)EDVISHK 100.04 0.0057762 41724000 11470 11877.6 10885.4 10141.7 12960.6 10183.7 10244 11385.6 8850.8 6854.8 TRUE FALSE 10494.41627 11104.36608 10146.52938 10922.81549 12444.35186 10760.29229 9560.641451 11286.0569 9770.872333 7704.024375 1.362199256 1.441372138 1.317042741 1.417806455 1.615305359 1.396710572 1.240993147 1.464956022 1.268281596 1 12.91139655 -9.035004404 0.804519639 0.99545446 1.417013517 0.630928448 0.094304434 1.171951781 1.200662302 0.103135457 0.033411589 9.23E-10 9.035004404 0.421559057 RQGS(ph)FSEDVISHK ddPTM_A459_MK2206_30min_R2 4 RQGSFSEDVISHK 13 1 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390;E9PNZ4 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 RQGS(0.818)FS(0.18)EDVIS(0.002)HK;RQGS(0.801)FS(0.199)EDVISHK;RQGS(0.889)FS(0.111)EDVISHK;RQGS(0.764)FS(0.235)EDVISHK 120.39 0.001563 55184900 187942 281773 259612 310447 304757 264249 270535 220431 287235 227704 TRUE FALSE 202330.984 267780.5626 268267.3345 285082.487 292790.7089 274305.1809 235013.4295 249242.0886 312218.1811 220274.0371 0.918542134 1.215670108 1.217879955 1.294217379 1.329211162 1.245290568 1.066913889 1.13150915 1.417407994 1 17.74893993 -4.761405695 7.582209609 1.220274555 0.913852697 0.362208905 0.116939099 0.108294196 45.99444626 0.028711709 0.170334975 1.73E-05 4.761405695 -0.306421858 RQILIACSPVS(ph)SVR ddPTM_A459_MK2206_30min_R2 1 RQILIACSPVSSVR 14 1 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 RQILIACS(0.277)PVS(0.361)S(0.361)VR 70.335 0.029734 4955500 13314 23054 20613 20516 30403 24259 17713 18727 20655 15700 TRUE FALSE 14333.33008 21909.17188 21300.22713 18839.77717 29209.22546 25182.19324 15387.26182 21174.6832 22451.53456 15187.71029 0.943745292 1.442559245 1.402464672 1.24046198 1.923214554 1.65806384 1.013139014 1.39419852 1.478269874 1 13.89061676 -10.86691649 3.578456442 0.998208278 1.398895671 0.155651755 0.270442472 202372731.5 325887674.1 3868360.248 0.069375455 1.36E-11 10.86691649 0.400687393 RQLAELETEDGMQES(ph)P ddPTM_A459_MK2206_30min_R1 2 RQLAELETEDGMQESP 16 1 Q96QG7-2;Q96QG7 Q96QG7-2 MTMR9 Myotubularin-related protein 9 1 RQLAELETEDGMQES(1)P;RQLAELETEDGMQES(1)P 186.29 1.45E-06 11489900 2258.6 1990.18 2086.8 1949.82 2206.42 2202.9 1958.82 2306.79 1741.19 1572.14 TRUE FALSE 2066.49421 1860.61892 1945.15383 2099.995474 2118.533619 2327.626294 1828.150692 2286.621978 1922.192931 1766.908572 1.169553559 1.053036331 1.100879729 1.188513943 1.199005796 1.317343937 1.034660605 1.294137124 1.087884773 1 10.78701167 -4.425517353 21.73412887 1.152456415 3.403351332 0 0.102255134 5496.021148 1553152.421 0.023818647 163385.7987 3.75E-05 4.425517353 2.250894917 RQLAELETEDGMQES(ph)P ddPTM_A459_MK2206_30min_R2 3 RQLAELETEDGMQESP 16 1 Q96QG7-2;Q96QG7 Q96QG7-2 MTMR9 Myotubularin-related protein 9 1 RQLAELETEDGMQES(1)P;RQLAELETEDGMQES(1)P;RQLAELETEDGMQES(1)P 144.18 0.00070011 7990700 15388.9 20217.3 19166.9 21958.9 21506.6 21890.5 19801.9 18557.7 20755.2 15750.6 TRUE FALSE 16567.08602 19213.33828 19805.91488 20164.78763 20662.14282 22723.55832 17201.88674 20983.25511 22560.44978 15236.65921 1.087317488 1.26099416 1.299885664 1.323438908 1.356080919 1.49137406 1.128980212 1.377155899 1.480669054 1 13.89525899 -4.519891141 1.490340538 1.325051795 0.845559565 0.170617263 0.141422851 3.560853293 4.500592624 0.0379002 3.042907674 3.02E-05 4.519891141 -0.47949223 RQLAFSTVGT(ph)PDY(ph)IAPEVFMQTGY(ph)NK ddPTM_A459_MK2206_30min_R1 1 RQLAFSTVGTPDYIAPEVFMQTGYNK 26 1 Q15208 Q15208 STK38 Serine/threonine-protein kinase 38 3 RQLAFS(0.044)T(0.194)VGT(0.78)PDY(0.982)IAPEVFMQT(0.207)GY(0.793)NK 63.165 0.0066162 0 325.43 149.44 108.48 156.52 683.11 736.12 639.18 168.52 169.95 169.36 TRUE FALSE 297.7504696 139.7114288 101.1166798 168.5751975 655.9002822 777.7984783 596.5414684 167.0466474 187.6169107 190.3415954 1.564295334 0.734003666 0.531237955 0.885645606 3.445911446 4.08632951 3.13405731 0.877615043 0.98568529 1 7.572447058 -6.227778969 22.79668691 2.384339739 0.886483588 0.26620951 1.064777435 305.0705492 206609.4479 0.350203754 0.452063845 5.92E-07 6.227778969 -1.497856151 RQLEEAEEEAQR ddPTM_A459_MK2206_30min_R2 3 RQLEEAEEEAQR 12 1 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 ;; 166.6 3.17E-05 6574800 36090.6 45836 41856 42071 43525 46671 47439 31731.3 43958 36907.7 FALSE TRUE 38853.72408 43559.85089 43251.45815 38633.66472 41815.9898 48447.09761 41210.20232 35878.68986 47781.38738 35703.40477 1.088235823 1.220047532 1.211409904 1.082072283 1.171204541 1.356932145 1.154237322 1.004909478 1.338286578 1 15.12377404 -10.87928106 4.461525847 0.999759454 1.178906471 0.213329505 0.104108158 74493001.67 65.55912635 184082.7769 0.024746337 1.32E-11 10.87928106 0.179147017 RQLEEAEEESQR ddPTM_A459_MK2206_30min_R1 3 RQLEEAEEESQR 12 1 P35749-4;P35749-3;P35749;P35749-2 P35749-4 MYH11 Myosin-11 0 ;; 232.78 4.43E-10 43398100 4549.02 4803.76 4944.4 4324.33 5468.94 5190.55 5578.45 4870.71 3834.87 3193.35 FALSE TRUE 4162.101961 4491.034351 4608.787904 4657.390646 5251.100539 5484.434455 5206.321779 4828.125896 4233.51846 3588.966307 1.159693796 1.251344807 1.284154687 1.297696955 1.463123387 1.528137627 1.450646602 1.345269218 1.179592701 1 11.80935266 -8.505844751 2.591524561 1.002006383 1.354171885 0.529189562 0.104070804 0.233991282 3.668240428 0.114548005 0.031031342 3.12E-09 8.505844751 0.352165503 RQLHLEGASLELS(ph)DDDTESK ddPTM_A459_MK2206_30min_R1 3 RQLHLEGASLELSDDDTESK 20 1 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 1 RQLHLEGASLELS(1)DDDTESK;RQLHLEGASLELS(0.731)DDDT(0.134)ES(0.134)K;RQLHLEGASLELS(0.982)DDDT(0.015)ES(0.003)K 142.14 2.71E-05 21640900 4204.3 4363.5 4733.7 3912.1 3802.73 3312.7 4110.55 3724.64 4130.82 4031.2 TRUE FALSE 3846.702207 4079.435357 4412.389633 4213.41062 3651.259212 3500.262211 3836.34271 3692.075865 4560.233521 4530.61549 0.849046275 0.900415267 0.973905122 0.929986363 0.805907987 0.772579845 0.846759721 0.814917062 1.006537309 1 12.14549134 -8.273526797 24.29837042 1.003268714 0.863670242 0.496961545 0.056948892 569.4146432 1144631.728 0.061114997 0.016290337 5.33E-09 8.273526797 -0.139598472 RQLHLEGASLELS(ph)DDDTESK ddPTM_A459_MK2206_30min_R2 4 RQLHLEGASLELSDDDTESK 20 1 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 1 RQLHLEGASLELS(0.999)DDDT(0.001)ESK;RQLHLEGASLELS(0.998)DDDT(0.001)ESK;RQLHLEGASLELS(0.907)DDDT(0.039)ES(0.054)K;RQLHLEGASLELS(0.996)DDDT(0.003)ES(0.001)K 149.32 8.59E-06 10971400 42000.2 55527.3 50218.1 56603.3 53363.7 40682.1 49857.1 42264 42649.6 48350.8 TRUE FALSE 45215.7676 52769.89503 51892.34639 51978.62933 51268.37301 42230.28582 43310.80288 47788.04991 46359.18512 46773.11736 0.96670417 1.128209921 1.109448104 1.111292817 1.096107677 0.90287516 0.925976401 1.021699057 0.991150211 1 15.51339196 -6.743998297 24.99459086 0.967048623 1.088013307 0.537146575 0.052779827 187.2676476 268370.3202 0.017841287 0.017802227 1.80E-07 6.743998297 0.120964685 RQLHLEGASLELSDDDT(ph)ESK ddPTM_A459_MK2206_30min_R1 1 RQLHLEGASLELSDDDTESK 20 1 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 1 RQLHLEGASLELS(0.347)DDDT(0.486)ES(0.167)K 88.976 0.0023742 9227400 1170.7 927.45 1191.5 1085.3 1040.6 942.02 1327 891.62 1297.4 951 TRUE FALSE 1071.125817 867.0728364 1110.6243 1168.889994 999.1506985 995.3563583 1238.478251 883.8246603 1432.269373 1068.81706 1.002160106 0.811245319 1.039115431 1.093629619 0.93481919 0.931269153 1.158737354 0.826918557 1.340051003 1 10.06179923 -8.258124422 24.99880746 1.170025491 0.978750012 0.272093412 0.127631158 350.2694837 2641509.54 0.089432765 0.030645981 5.52E-09 8.258124422 -0.191275479 RQLLS(ph)LLR ddPTM_A459_MK2206_30min_R1 1 RQLLSLLR 8 1 A0A0B4J229 A0A0B4J229 ADAMTS13 1 RQLLS(1)LLR 79.07 0.025386 7920300 1607.2 1668.7 1589.5 1786.8 1677 1320.9 1451.4 1332.3 1014.4 918.31 TRUE FALSE 1470.4992 1560.067327 1481.609169 1924.419646 1610.201539 1395.688217 1354.579754 1320.651842 1119.85051 1032.077176 1.424795776 1.511580106 1.435560444 1.864608278 1.560156136 1.352309933 1.312479131 1.279605705 1.085045321 1 10.01133514 -7.71519149 0.890750274 1.020044491 1.55947871 0.708981219 0.124945997 0.349181858 0.507564652 0.119756884 0.052222035 1.93E-08 7.71519149 0.539434219 RQLQEDQENNLQDNQTSNSS(ph)PCR ddPTM_A459_MK2206_30min_R2 1 RQLQEDQENNLQDNQTSNSSPCR 23 1 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 RQLQEDQENNLQDNQT(0.001)S(0.004)NS(0.225)S(0.77)PCR 131.5 3.80E-06 3827100 30945 34297 28655 36052 31471 31145 33996 24877 26515 33262 TRUE FALSE 33314.17299 32593.86085 29610.3434 33106.43628 30235.29041 32330.2448 29532.28436 28128.50932 28821.22677 32176.66366 1.035351997 1.012965831 0.92024281 1.028895868 0.939665179 1.00477306 0.917816859 0.874189742 0.895718309 1 14.97372712 -7.303001994 7.335413944 0.911084363 0.987596696 0.334640261 0.04615421 0.272766884 41.38236124 0.018709681 0.01267375 4.98E-08 7.303001994 0.076512333 RQLS(ph)PQSK ddPTM_A459_MK2206_30min_R1 1 RQLSPQSK 8 1 E7ERS3;Q86VM9;H3BRH3 E7ERS3;H3BRH3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RQLS(1)PQSK 65.241 0.043838 4683600 2727.8 2693.6 2141.2 3215.6 1184.4 1810.6 3236.7 4609.6 207.97 1632.2 TRUE FALSE 2495.786286 2518.24615 1995.86131 3463.266069 1137.22284 1913.114607 3020.785649 4569.298753 229.5892257 1834.409258 1.360539517 1.372783166 1.088013103 1.887946244 0.619939544 1.042905011 1.646734847 2.490882954 0.125157036 1 10.84109983 -6.206567352 24.99579145 1.247860981 1.39918788 0.031403824 0.616465886 2196.076005 1000373.431 0.18318867 0.23649547 6.21E-07 6.206567352 0.151326899 RQPS(ph)MSETMPLYTLCK ddPTM_A459_MK2206_30min_R1 2 RQPSMSETMPLYTLCK 16 1 K7EJD2;A0A0A0MR03;Q9Y5B0 K7EJD2 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 RQPS(0.902)MS(0.068)ET(0.03)MPLYTLCK;RQPS(0.991)MS(0.009)ETMPLYTLCK 102.61 0.0024881 35719000 7537.9 7429.5 7808.1 5523.8 7110.7 8158.7 9803.3 9158.8 9950.7 10262.6 TRUE FALSE 6896.762022 6945.8382 7278.107927 5949.244033 6827.465762 8620.638543 9149.339744 9078.725577 10985.11087 11534.00837 0.597950149 0.60220506 0.631012888 0.515800218 0.591942154 0.747410464 0.793248926 0.787126668 0.952410517 1 13.49360635 -7.634444883 0.729720719 0.995345896 0.57839994 0.91028586 0.046187578 0.198931228 0.202064125 0.04517739 0.022990482 2.32E-08 7.634444883 -0.416945956 RQPS(ph)MSETMPLYTLCK ddPTM_A459_MK2206_30min_R2 1 RQPSMSETMPLYTLCK 16 1 K7EJD2;A0A0A0MR03;Q9Y5B0 K7EJD2 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 RQPS(0.919)MS(0.08)ET(0.001)MPLYTLCK 101.89 0.0026857 12915000 45735 69388 51824 65363 64209 77005 90984 68947 68550 90790 TRUE FALSE 49236.50676 65942.29282 53551.78629 60022.63381 61687.83204 79935.47923 79037.69151 77958.60963 74512.35509 87827.52974 0.560604481 0.750815752 0.609738045 0.683414802 0.702374668 0.910141495 0.899919328 0.887632954 0.848394066 1 16.42238561 -6.69654943 3.845166395 0.902978202 0.659023006 0.8187321 0.058536129 0.092822375 2.738859544 0.019294864 0.018762732 2.01E-07 6.69654943 -0.243955196 RQPSMS(ph)ETMPLYTLCK ddPTM_A459_MK2206_30min_R2 1 RQPSMSETMPLYTLCK 16 1 K7EJD2;A0A0A0MR03;Q9Y5B0 K7EJD2 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 RQPS(0.248)MS(0.745)ET(0.007)MPLYTLCK 109.13 0.0015526 9958400 57743 64298 53891 61100 63411 62674 80494 70068 66050 93942 TRUE FALSE 62163.84848 61105.05482 55687.69904 56107.93455 60921.16553 65059.10299 69925.04111 79226.12818 71794.90961 90876.68023 0.684046208 0.672395324 0.612783157 0.617407397 0.67037182 0.715905366 0.769449774 0.871798221 0.790025664 1 16.47162251 -7.995145823 0.55494373 0.988186217 0.634526182 0.876491334 0.040481295 0.261176698 0.186839142 0.042310123 0.023447179 1.01E-08 7.995145823 -0.353660035 RQQDPS(ph)PGSNLGGGDDLK ddPTM_A459_MK2206_30min_R2 1 RQQDPSPGSNLGGGDDLK 18 1 J3KTD8;Q13951-2 J3KTD8 CBFB 1 RQQDPS(0.989)PGS(0.011)NLGGGDDLK 68.552 0.014032 5344000 14930 20551 18543 22379 21406 20120 21562 20309 16926 17694 TRUE FALSE 16073.05228 19530.46722 19161.21437 20550.56411 20565.49288 20885.6807 18730.8835 22963.45603 18398.19288 17116.64623 0.939030466 1.141021843 1.119449109 1.200618616 1.201490795 1.220197019 1.094308035 1.34158618 1.074871364 1 14.06311243 -4.074138645 1.340198898 1.174307183 1.66E-08 0.329006477 0.09003532 7.643107852 3.072789864 0.023896839 19.42051718 8.43E-05 4.074138645 -1.174307167 RQQEEMMR ddPTM_A459_MK2206_30min_R2 2 RQQEEMMR 8 1 Q15233-2;Q15233;H7C367 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 0 ; 190.73 0.00047561 10232600 16680.5 29741 21066 31952 28183 27588 24217.6 19809.4 23021 22430 FALSE TRUE 17957.57191 28264.10519 21768.32993 29341.41939 27076.39381 28637.88067 21037.80003 22398.5566 25023.32497 21698.11094 0.827609922 1.302606723 1.00323618 1.352256861 1.247868715 1.3198329 0.969568277 1.032281412 1.15324901 1 14.40528182 -7.277948129 24.85784245 1.041464798 1.18482739 0.153773674 0.156254116 1461.307573 2200335.65 0.063889927 0.043216625 5.27E-08 7.277948129 0.143362592 RQQVLDR ddPTM_A459_MK2206_30min_R2 2 RQQVLDR 7 1 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2;A0A0D9SFF6 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 ; 134.81 0.0037248 6097300 13255.8 20755 18561.8 18374.6 18658.3 19207.7 18011.2 16418.5 18512 16384.9 FALSE TRUE 14270.67424 19724.33688 19180.64115 16873.3364 17925.68139 19938.66248 15646.3078 18564.45432 20122.1403 15850.26205 0.90034311 1.244417084 1.210115081 1.06454621 1.130939118 1.25793898 0.987132437 1.171239583 1.269514676 1 13.95221907 -4.747817619 24.99932431 1.150920024 0.900342492 0.366519745 0.097795353 761.2619105 1397024.776 0.023619017 0.466950805 1.79E-05 4.747817619 -0.250577532 RQRLS(ph)NES(ph)T(ph)T(ph)PGGIK ddPTM_A459_MK2206_30min_R2 1 RQRLSNESTTPGGIK 15 2 Q8NA31 Q8NA31 CCDC79 Telomere repeats-binding bouquet formation protein 1 4 RQRLS(1)NES(1)T(1)T(1)PGGIK 71.03 0.031447 2620400 823.74 1034.2 0 0 562.95 1041.5 1027.3 1188 0 733.88 TRUE FALSE 886.8061677 982.8431319 0 0 540.8457544 1081.135012 892.414276 1343.275679 0 709.9335557 1.24913967 1.38441566 0 0 0.761825878 1.522867885 1.257039154 1.892114647 0 1 9.471540196 -6.593581764 7.817837999 1.194893056 0.628616463 0.116961077 0.617272149 0.489452932 46.97151322 0.211802417 0.211774354 2.55E-07 6.593581764 -0.566276593 RQS(ph)FAVLR ddPTM_A459_MK2206_30min_R1 2 RQSFAVLR 8 1 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-2;A0A087WWG1 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 RQS(1)FAVLR;RQS(1)FAVLR 83.397 0.020022 12142500 6134.3 5294 6276.7 4846.2 5024.6 5874.9 5260.8 4245.5 5057.1 4604.9 TRUE FALSE 5612.545573 4949.359638 5850.655092 5219.455164 4824.459542 6207.531761 4909.861631 4208.382041 5582.803642 5175.389777 1.084468188 0.956325968 1.130476224 1.008514409 0.932192501 1.199432705 0.948694078 0.813152675 1.078721388 1 12.33745181 -7.4710935 24.99723431 0.94374626 1.046244432 0.169416504 0.096424519 528.6601807 255189.6476 0.038741526 0.02611921 3.38E-08 7.4710935 0.102498172 RQS(ph)FAVLR ddPTM_A459_MK2206_30min_R2 1 RQSFAVLR 8 1 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-2;A0A087WWG1 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 RQS(1)FAVLR 63.694 0.045994 29167000 44098 55191 43104 58818 43905 51944 52677 42757 43032 37634 TRUE FALSE 47474.17679 52450.2952 44541.06585 54012.38125 42181.0691 53920.76532 45760.44662 48345.48671 46774.84558 36406.00566 1.304020475 1.440704473 1.223453797 1.483611846 1.158629416 1.48109534 1.256947742 1.327953612 1.284811248 1 15.15188884 -11.11423246 0.364416015 0.751393961 1.35024433 0.490015708 0.102218932 21.03686385 1.485805541 4.781253598 0.069137518 7.69E-12 11.11423246 0.598850369 RQS(ph)GLYDSQNPPTVNNCAQDR ddPTM_A459_MK2206_30min_R2 4 RQSGLYDSQNPPTVNNCAQDR 21 1 H0Y7W6;B7ZL14;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 H0Y7W6;Q96RU3-5 FNBP1 Formin-binding protein 1 1 RQS(0.969)GLY(0.026)DS(0.004)QNPPTVNNCAQDR;RQS(0.812)GLY(0.006)DS(0.182)QNPPTVNNCAQDR;RQS(0.953)GLY(0.047)DSQNPPTVNNCAQDR;RQS(0.995)GLY(0.005)DSQNPPTVNNCAQDR 102.72 0.00010557 23830200 21157.6 31461.7 33340.5 36873.2 32071.8 32990 30424.9 25477.3 30250.4 29836 TRUE FALSE 22777.44212 29899.35773 34452.05563 33860.54161 30812.49998 34245.45757 26430.07408 28807.27059 32881.52511 28862.45376 0.789172061 1.035925704 1.193663432 1.173169194 1.067563425 1.186505411 0.915725125 0.998088064 1.139249122 1 14.81690634 -4.782515387 4.029379402 1.086034616 0.76360759 0.501786376 0.087641436 0.193543283 5.95992488 0.023095325 0.180926824 1.65E-05 4.782515387 -0.322427026 RQS(ph)LELQK ddPTM_A459_MK2206_30min_R2 2 RQSLELQK 8 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 RQS(1)LELQK;RQS(1)LELQK 113.67 0.0054664 17391200 60005 73779 60854 75059 57192 67768 91264 61623 53328 69440 TRUE FALSE 64599.02894 70115.24214 62882.84199 68926.4396 54946.35471 70346.95873 79280.92717 69677.33768 57966.37305 67174.17849 0.961664592 1.043782652 0.936116279 1.026085337 0.817968391 1.047232141 1.180229204 1.037263711 0.862926415 1 16.03561915 RQS(ph)LTSPDSQSAR ddPTM_A459_MK2206_30min_R2 1 RQSLTSPDSQSAR 13 1 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 RQS(0.977)LT(0.01)S(0.01)PDS(0.003)QS(0.001)AR 101.75 0.028802 0 7768 6234 6456.1 6583.1 4629.4 6270.4 5438.5 5515.2 5504.6 6217.5 TRUE FALSE 8362.724053 5924.428625 6671.343152 6045.239672 4447.626495 6509.024466 4724.418417 6236.055577 5983.380158 6014.623484 1.390398597 0.985004072 1.109187162 1.005090292 0.739468814 1.082199822 0.785488639 1.03681562 0.994805439 1 12.55425871 -1.970076333 1.045922095 0.950426695 200 0.547930614 0.113500508 568.2526484 1.797334917 0.034204911 269836.7605 0.01071331 1.970076333 199.0495733 RQS(ph)PEPSPVTLGR ddPTM_A459_MK2206_30min_R1 2 RQSPEPSPVTLGR 13 1 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 RQS(0.984)PEPS(0.012)PVT(0.004)LGR;RQS(0.995)PEPS(0.004)PVTLGR 180.95 0.00018172 97342000 5331.9 5599 4795.8 4677.3 5530.2 5163.7 4899.8 4319.9 4226.4 4258.6 TRUE FALSE 4878.393906 5234.504082 4470.274458 5037.546456 5309.920424 5456.064232 4572.943282 4282.13157 4665.749404 4786.187519 1.019265101 1.093668826 0.933994843 1.05251757 1.109425906 1.139960399 0.955445909 0.89468529 0.974836315 1 12.22466121 -7.397495204 8.576276584 0.946011125 1.05607696 0.41967623 0.05827146 0.304071548 19.76092945 0.025616451 0.017224268 4.00E-08 7.397495204 0.110065835 RQS(ph)PEPSPVTLGR ddPTM_A459_MK2206_30min_R2 4 RQSPEPSPVTLGR 13 1 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 RQS(0.998)PEPS(0.002)PVTLGR;RQS(1)PEPSPVTLGR;RQS(0.997)PEPS(0.003)PVTLGR;RQS(1)PEPSPVTLGR 116.78 0.0019221 201140000 285689 348682 308725 334521 318034 361529 383417 286045 256720 358114 TRUE FALSE 307561.5695 331366.9589 319017.7374 307189.5642 305546.3872 375287.2394 333073.8873 323432.0636 279049.0416 346428.7695 0.887806085 0.956522633 0.920875417 0.886732256 0.881989067 1.083302752 0.961449847 0.933617794 0.805501927 1 18.40219922 RQS(ph)PLPPQK ddPTM_A459_MK2206_30min_R1 4 RQSPLPPQK 9 1 Q01105;B2REB7 Q01105 SET Protein SET 1 RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK 99.539 0.0096092 134595000 48894.5 52657.6 52136 43333.6 52383.7 47005.2 49189.7 47174.9 35752.7 39531.3 TRUE FALSE 44735.76602 49229.58067 48597.15358 46671.16138 50297.1463 49666.5938 45908.34486 46762.45482 39469.32111 44428.73589 1.00691062 1.1080572 1.093822559 1.050472413 1.132085919 1.117893472 1.033302973 1.052527241 0.888373714 1 15.43920547 -8.103646111 4.526225513 0.945428178 1.079842047 0.578678667 0.044677398 0.152995636 5.018288984 0.031761877 0.011334099 7.88E-09 8.103646111 0.134413869 RQS(ph)PLPPQK ddPTM_A459_MK2206_30min_R2 5 RQSPLPPQK 9 1 Q01105;B2REB7 Q01105 SET Protein SET 1 RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK 134.38 0.0052008 162673400 555911 649707 574584 705579 644983 598095 687974 528899 544728 616776 TRUE FALSE 598471.9736 617443.4951 593740.3438 647930.9387 619657.7266 620855.9243 597642.1874 598027.9153 592107.4568 596650.6496 1.00305258 1.03484928 0.995122261 1.085946926 1.038560382 1.040568589 1.00166184 1.002308328 0.992385506 1 19.18652693 -7.285164063 9.835365351 0.999249113 1.034035198 0.342317768 0.023012209 0.590396652 237.947824 0.009755494 0.006671381 5.19E-08 7.285164063 0.034786085 RQS(ph)SGSATNVASTPDNR ddPTM_A459_MK2206_30min_R1 3 RQSSGSATNVASTPDNR 17 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RQS(1)SGSATNVASTPDNR;RQS(0.998)S(0.002)GSATNVASTPDNR;RQS(0.499)S(0.499)GS(0.002)ATNVASTPDNR 321.6 2.03E-118 62323000 4603.22 4260.08 4054.18 3231.77 4718.12 3613.51 4180.88 4180.26 2798.9 2780.1 TRUE FALSE 4211.691967 3982.748018 3778.993557 3480.681485 4530.18729 3818.103813 3901.981124 4143.712428 3089.855671 3124.519777 1.347948571 1.274675247 1.209463798 1.113989264 1.449882738 1.221981004 1.248825868 1.326191775 0.988905781 1 11.60941876 -8.267962155 24.80146355 0.994452824 1.269923092 0.633111742 0.085110498 320.7760782 1219662.61 0.0750979 0.021223296 5.40E-09 8.267962155 0.275470268 RQS(ph)SGSATNVASTPDNR ddPTM_A459_MK2206_30min_R2 4 RQSSGSATNVASTPDNR 17 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RQS(0.941)S(0.049)GS(0.009)AT(0.001)NVASTPDNR;RQS(0.969)S(0.03)GSATNVASTPDNR;RQS(0.868)S(0.132)GS(0.001)ATNVASTPDNR;RQS(0.982)S(0.017)GSATNVASTPDNR 265.42 1.06E-40 156955000 39603.2 52304.2 49551 57370 53587.8 54506 48460.2 36512.1 44904.1 41464.9 TRUE FALSE 42635.25144 49706.84949 51203.00561 52682.68748 51483.67371 56580.26402 42097.31753 41284.35683 48809.77745 40111.90371 1.062907703 1.239204448 1.276504002 1.313392849 1.283501129 1.410560427 1.049496873 1.029229556 1.216840213 1 15.29174282 -7.28643131 24.82847329 1.076327428 1.266855195 0.480497748 0.096981494 657.074873 652774.2739 0.041270673 0.027839448 5.17E-08 7.28643131 0.190527768 RQS(ph)SSYDDPWK ddPTM_A459_MK2206_30min_R1 3 RQSSSYDDPWK 11 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;H0YCF0;H7C1V2;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 RQS(0.747)S(0.199)S(0.053)Y(0.001)DDPWK;RQS(0.692)S(0.226)S(0.075)Y(0.007)DDPWK;RQS(0.989)S(0.008)S(0.002)YDDPWK 190.34 3.55E-05 55968000 14167.1 15575.8 15473.5 12478.9 13798.3 12222.9 14332 13804 12503.9 11976.4 TRUE FALSE 12962.11375 14561.81259 14423.20193 13440.02704 13248.68449 12914.95004 13375.93843 13683.31308 13803.72515 13460.12685 0.963000861 1.081848095 1.071550223 0.998506715 0.984291206 0.959496904 0.993745347 1.016581288 1.025527122 1 13.71640439 -5.848631183 8.581902645 0.995155434 1.042998158 0.239135759 0.033950166 0.341985314 29.92529846 0.009799367 0.014582697 1.42E-06 5.848631183 0.047842724 RQS(ph)SSYDDPWK ddPTM_A459_MK2206_30min_R2 4 RQSSSYDDPWK 11 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;H0YCF0;H7C1V2;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 RQS(0.929)S(0.057)S(0.014)YDDPWK;RQS(0.853)S(0.108)S(0.031)Y(0.008)DDPWK;RQS(0.725)S(0.212)S(0.062)Y(0.001)DDPWK;RQS(0.525)S(0.153)S(0.287)Y(0.035)DDPWK 104.41 0.0107 70856000 536590 693580 673350 633060 696150 511984 651230 506290 531785 591230 TRUE FALSE 577671.743 659137.8258 695799.1529 581336.9729 668815.6531 531467.9099 565722.7187 572463.8414 578038.6981 571938.2135 1.010024736 1.152463343 1.216563497 1.016433173 1.16938445 0.929240078 0.989132576 1.000919029 1.010666335 1 19.12549978 -6.760584777 24.99995263 0.986245351 1.115559314 0.503715245 0.06299468 19.35537459 566215.9672 0.021205604 0.020034349 1.74E-07 6.760584777 0.129313963 RQS(ph)STPSAPELGQQPDVNISEWK ddPTM_A459_MK2206_30min_R1 1 RQSSTPSAPELGQQPDVNISEWK 23 1 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 RQS(0.479)S(0.479)T(0.039)PS(0.003)APELGQQPDVNISEWK 124.96 5.29E-06 11539000 2411.6 2106.9 2058.8 2353.5 2571.6 1897 2041.4 2437.2 1847.2 1231.2 TRUE FALSE 2206.480756 1969.740427 1919.054392 2534.766978 2469.167727 2004.406501 1905.221931 2415.891817 2039.22305 1383.730351 1.594588682 1.423500197 1.386870202 1.831835932 1.784428393 1.448552819 1.376873702 1.745926737 1.473714188 1 10.43434712 -8.554979381 21.51381779 0.999999995 1.570294763 0.537385449 0.159097392 1511.609445 1013078.662 0.162751378 0.042022225 2.79E-09 8.554979381 0.570294768 RQS(ph)STPSAPELGQQPDVNISEWK ddPTM_A459_MK2206_30min_R2 2 RQSSTPSAPELGQQPDVNISEWK 23 1 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 RQS(0.598)S(0.376)T(0.019)PS(0.008)APELGQQPDVNISEWK;RQS(0.478)S(0.478)T(0.033)PS(0.011)APELGQQPDVNISEWK 126.45 4.95E-06 19743800 35713 63551 56907 61881 65390 58408 65942 47093 58508 51009 TRUE FALSE 38447.21474 60395.14975 58804.25098 56825.12435 62822.46004 60630.75737 57283.73619 53248.21679 63596.92008 49344.58051 0.779157799 1.223946969 1.191706371 1.151598084 1.27313799 1.228721711 1.160892151 1.079109727 1.288832926 1 15.59060402 -4.757970513 24.98153751 1.183718885 0.779157227 0.67375965 0.083066618 53.98431256 388714.9282 0.019426111 0.138061823 1.75E-05 4.757970513 -0.404561658 RQS(ph)VGDFVSGALNK ddPTM_A459_MK2206_30min_R1 1 RQSVGDFVSGALNK 14 1 Q6P4F7-3;Q6P4F7;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 RQS(1)VGDFVSGALNK 77.795 0.02024 12318000 4046.3 3601.8 4372.8 3323.3 3762.2 3789.4 4043.7 4470.4 4005 3216.9 TRUE FALSE 3702.140937 3367.322165 4075.986519 3579.261142 3612.343607 4003.952553 3773.952151 4431.315764 4421.334082 3615.433858 1.023982482 0.931374296 1.127385171 0.989994917 0.999145261 1.107461154 1.043844888 1.22566639 1.222905536 1 11.81995307 -7.294064644 1.594126741 1.159244286 1.017593535 0.286343278 0.080395902 0.434993623 2.152151294 0.045222324 0.026559393 5.08E-08 7.294064644 -0.141650751 RQS(ph)VGDFVSGALNK ddPTM_A459_MK2206_30min_R2 1 RQSVGDFVSGALNK 14 1 Q6P4F7-3;Q6P4F7;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 RQS(1)VGDFVSGALNK 178.99 0.00012952 4830800 22683 26394 25241 25030 21993 24707 28667 24412 23383 25736 TRUE FALSE 24419.62792 25083.31234 26082.52234 22984.96893 21129.44431 25647.2422 24902.98846 27602.73222 25416.81107 24896.23643 0.980856203 1.007514225 1.047649207 0.923230666 0.84870034 1.030165434 1.000271207 1.108711041 1.020909773 1 14.60364005 -6.962445826 24.99947147 1.037773417 0.964055569 0.275235702 0.05681733 237.3371121 157992.5362 0.02164332 0.019087571 1.09E-07 6.962445826 -0.073717848 RQS(ph)VSGLHR ddPTM_A459_MK2206_30min_R2 3 RQSVSGLHR 9 1 Q8N1G4;J3KRP5 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 RQS(0.995)VS(0.005)GLHR;RQS(0.983)VS(0.017)GLHR;RQS(0.991)VS(0.009)GLHR 72.289 0.034839 25589200 23425.4 26167.4 20117.6 26015.5 24680.3 26880.9 31688.9 19019.6 22789.6 20889.1 TRUE FALSE 25218.86664 24867.96497 20788.31074 23889.95043 23711.22741 27903.87149 27528.10936 21505.52702 24771.79821 20207.49038 1.247995974 1.230631043 1.028742825 1.182232429 1.173388034 1.380867736 1.362272546 1.064235421 1.225872078 1 14.30260254 -9.142122164 1.159680221 1.000213405 1.213425945 0.262805112 0.10538951 4.655812153 7.369996417 0.110420516 0.0331803 7.21E-10 9.142122164 0.21321254 RQS(ph)YSSTSR ddPTM_A459_MK2206_30min_R2 1 RQSYSSTSR 9 1 P35398;H0YII6;A0A087X2G0 P35398 RORA Nuclear receptor ROR-alpha 1 RQS(0.991)YS(0.009)STSR 110.54 0.01938 900160 3735.5 3745.1 2793.3 1927.6 2482.6 3474.5 1117.7 3538.5 4665.8 3467.4 TRUE FALSE 4021.492752 3559.12378 2886.427228 1770.108914 2385.12065 3606.724532 970.9446474 4000.994099 5071.62285 3354.259022 1.198921349 1.06107601 0.860526038 0.527719804 0.711072292 1.075267148 0.28946621 1.192810118 1.511994994 1 11.71177839 -7.97618241 24.98900793 1.288132954 0.817502915 0.319352887 0.279349345 236.020213 247628.229 0.153304147 0.073639664 1.06E-08 7.97618241 -0.470630039 RQSS(ph)GSATNVASTPDNR ddPTM_A459_MK2206_30min_R1 1 RQSSGSATNVASTPDNR 17 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RQS(0.008)S(0.878)GS(0.106)AT(0.008)NVASTPDNR 187.75 1.17E-07 697900 143.11 174.61 231.76 198.71 230.41 181.27 149.15 340.1 209.37 0 TRUE FALSE 130.937743 163.2428573 216.0287769 214.0146786 221.2322818 191.5333507 139.2004756 337.1265416 231.1347607 0 0 RQSS(ph)TPSAPELGQQPDVNISEWK ddPTM_A459_MK2206_30min_R1 1 RQSSTPSAPELGQQPDVNISEWK 23 1 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 RQS(0.233)S(0.699)T(0.05)PS(0.017)APELGQQPDVNISEWK 123.38 5.37E-06 12060000 1499.1 1124.7 1118.5 887.76 1054 953.45 1118.6 1155.2 979.04 732.41 TRUE FALSE 1371.593673 1051.481826 1042.579336 956.135429 1012.016948 1007.433515 1043.980235 1145.100208 1080.814712 823.1464802 1.666281404 1.277393333 1.266578138 1.161561705 1.229449402 1.223881216 1.268280021 1.391125681 1.313028407 1 9.685005373 -4.757465245 4.390697394 1.245530129 1.70576603 0.636967868 0.097360674 0.142731106 5.807662481 0.023957592 0.211086482 1.75E-05 4.757465245 0.460235902 RQSSGS(ph)ATNVASTPDNR ddPTM_A459_MK2206_30min_R1 1 RQSSGSATNVASTPDNR 17 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RQS(0.005)S(0.051)GS(0.907)AT(0.037)NVASTPDNR 109.56 0.0026583 0 1060.3 760.23 828.22 823.89 907.9 1003.9 754.46 870.2 584.02 830.62 TRUE FALSE 970.1159171 710.7388888 772.002734 887.3461506 871.7364205 1060.73995 704.13135 862.5919331 644.7309689 933.5234765 1.039198201 0.761350846 0.826977311 0.950534371 0.933813067 1.136275602 0.754272782 0.924017397 0.69064248 1 9.866542494 -10.73838435 4.982478295 1.000007646 0.892308458 0.059830915 0.129752063 1.88E-05 2.97E-06 0.123586367 0.0299704 1.83E-11 10.73838435 -0.107699188 RQSSPS(ph)PSR ddPTM_A459_MK2206_30min_R2 1 RQSSPSPSR 9 1 Q15464 Q15464 SHB SH2 domain-containing adapter protein B 1 RQSS(0.002)PS(0.992)PS(0.006)R 74.987 0.030916 388140 0 461.59 0 0 895.61 575 397.97 2257.4 823 556.37 TRUE FALSE 0 438.6681118 0 0 860.4438513 596.8820279 345.716061 2552.449931 894.5830524 538.2156925 0 0.815041475 0 0 1.598697071 1.109001533 0.642337386 4.742429414 1.662127405 1 9.072040645 -7.111840123 1.215907787 2.471041708 0.342006351 0.327262343 1.09214552 0.488618682 1.447394641 0.651132767 0.424844494 7.73E-08 7.111840123 -2.129035357 RQSSSSAGDS(ph)DGEREDSAAER ddPTM_A459_MK2206_30min_R1 1 RQSSSSAGDSDGEREDSAAER 21 2 I3L3Z2;Q9BRA0 I3L3Z2 NAA38 "N-alpha-acetyltransferase 38, NatC auxiliary subunit" 1 RQS(0.011)S(0.003)S(0.003)S(0.037)AGDS(0.943)DGEREDS(0.002)AAER 74.222 0.0037046 633960 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 RQSY(ph)S(ph)S(ph)TSRGIS(ph)VTK ddPTM_A459_MK2206_30min_R1 1 RQSYSSTSRGISVTK 15 2 P35398;H0YII6 P35398 RORA Nuclear receptor ROR-alpha 4 RQS(0.304)Y(0.784)S(0.799)S(0.792)T(0.161)S(0.161)RGIS(0.819)VT(0.181)K 46.249 0.047149 0 1038 914.34 1009.4 723.2 737.57 917.41 1014.1 511.22 777.12 901.12 TRUE FALSE 949.7126492 854.8162998 940.8847403 778.9009893 708.1910251 969.3529614 946.4512393 506.7504574 857.904405 1012.757549 0.937749267 0.844048312 0.929032562 0.769089295 0.699270053 0.957142173 0.934528941 0.500367001 0.847097517 1 9.984073123 -5.761401174 24.99999907 0.80057471 0.897653881 0.071472968 0.138288246 2.650711874 1730864.109 0.03875726 0.061959318 1.73E-06 5.761401174 0.09707917 RQTIEER ddPTM_A459_MK2206_30min_R2 2 RQTIEER 7 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 98.458 0.029555 6509900 26433 17149.3 19884 18782 19962.6 17960.2 20698 36239 28014 22781 FALSE TRUE 28456.7308 16297.6907 20546.92264 17247.45052 19178.76802 18643.688 17980.32774 40975.56173 30450.60708 22037.65784 1.291277459 0.73953824 0.932355098 0.782635371 0.87027252 0.845992262 0.815891048 1.859342859 1.381753329 1 14.42768328 -7.739462825 24.99993762 1.465411183 0.884795237 0.485766367 0.241718671 158.3423555 180126.3277 0.106623255 0.061494411 1.82E-08 7.739462825 -0.580615946 RQVDQLTNDK ddPTM_A459_MK2206_30min_R2 3 RQVDQLTNDK 10 1 P08670;B0YJC4 P08670 VIM Vimentin 0 ;; 109.16 0.013857 29202700 85878 119134 104410 110561 105531 90343 111085 93497 93534 96496 FALSE TRUE 92452.88571 113217.9788 107890.9773 101527.8126 101387.3227 93781.06617 96499.40606 105717.3789 101669.4182 93347.34342 0.990417963 1.212867712 1.155801262 1.08763473 1.086129706 1.004646332 1.033767031 1.132516203 1.089151705 1 16.51032134 -6.104932885 2.678573932 1.059896615 1.127873121 0.150920189 0.064220102 0.503867129 7.044492042 0.020290209 0.028362766 7.85E-07 6.104932885 0.067976506 RQVEEAER ddPTM_A459_MK2206_30min_R2 2 RQVEEAER 8 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 146.69 0.0024549 4198100 15866.9 13191.5 16171 10836.3 18395.6 12338.7 14925.1 30169 26927 17434.9 FALSE TRUE 17081.68206 12536.42929 16710.13307 9950.939626 17673.29631 12808.25787 12965.41644 34112.19189 29269.06179 16866.00064 1.012787941 0.74329591 0.990758475 0.589999955 1.04786527 0.759412865 0.768730935 2.022541835 1.735388395 1 14.04183029 -7.748520566 24.99974719 1.659223836 0.841149363 0.602218108 0.274140186 123.8182734 239607.052 0.121417347 0.069533764 1.78E-08 7.748520566 -0.818074473 RQVQDESQR ddPTM_A459_MK2206_30min_R2 2 RQVQDESQR 9 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 144.65 0.0026088 753080 1668.06 1440.89 518.41 873.85 1163.58 1803.36 2046.5 3668.8 2273.4 1500.95 FALSE TRUE 1795.767956 1369.337498 535.6935307 802.4536597 1117.892003 1871.988128 1777.792092 4148.324757 2471.136223 1451.974124 1.236776831 0.943086709 0.368941513 0.552663884 0.769911794 1.289270998 1.224396538 2.857023887 1.70191478 1 10.50380003 -7.249292826 1.958067977 1.930845283 0.766094904 0.419170219 0.505989965 0.284944306 2.133793761 0.254141232 0.162589618 5.63E-08 7.249292826 -1.164750379 RRAS(ph)SASVPAVGASAEGTR ddPTM_A459_MK2206_30min_R2 1 RRASSASVPAVGASAEGTR 19 2 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 "Pantothenate kinase 2, mitochondrial" 1 RRAS(0.736)S(0.253)AS(0.011)VPAVGASAEGTR 87.748 0.0037154 10634000 5906 8607.8 6645 9648.6 9526.8 8324.5 6612.1 6933.4 9302.8 6386.7 TRUE FALSE 6358.167901 8180.349169 6866.540983 8860.278516 9152.729964 8641.294681 5743.923327 7839.619186 10111.94073 6178.302502 1.02911243 1.324044779 1.111396048 1.434095937 1.48143118 1.398651924 0.929692796 1.268895329 1.636685922 1 12.59299479 -10.67432103 5.356404106 0.999991803 1.287947854 0.15273659 0.205145724 2.04E-05 3.23E-06 0.201512104 0.048872472 2.12E-11 10.67432103 0.287956051 RRDEDMLYS(ph)PELAQR ddPTM_A459_MK2206_30min_R1 2 RRDEDMLYSPELAQR 15 2 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 RRDEDMLYS(1)PELAQR;RRDEDMLYS(1)PELAQR 152.94 8.50E-05 49572000 11016.7 10604.6 11364.4 10840.7 12389.1 11018.9 11648.5 11059.6 8952.6 7465.9 TRUE FALSE 10079.67181 9914.238613 10593.01619 11675.65259 11895.61591 11642.7806 10871.44982 10962.90708 9883.254807 8390.832057 1.201272025 1.181556078 1.262451223 1.391477331 1.417692052 1.387559722 1.2956343 1.306533966 1.177863499 1 13.03459816 -8.572494019 2.10644186 1.000434136 1.310191858 0.620949973 0.074332104 0.276280588 2.812145396 0.082812954 0.022928695 2.68E-09 8.572494019 0.309757721 RRDEDMLYS(ph)PELAQR ddPTM_A459_MK2206_30min_R2 3 RRDEDMLYSPELAQR 15 2 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 RRDEDMLY(0.008)S(0.992)PELAQR;RRDEDMLYS(1)PELAQR;RRDEDMLY(0.001)S(0.999)PELAQR 89.502 0.0064695 52262700 117084 124662 120485 139645 136970 138385 140491 109291 108941 130875 TRUE FALSE 126048.0411 118471.4664 124501.9098 128235.5568 131591.8696 143651.3381 122044.3629 123575.709 118416.4913 126604.5595 0.995604278 0.935759872 0.983391991 1.012882611 1.039392816 1.134645851 0.963980788 0.976076292 0.935325645 1 16.94996984 -1.559053348 21.44821052 0.999369817 0.002636903 0 0.055042494 0 0 0.013609912 0 0.027602388 1.559053348 -0.996732914 RRDEQLS(ph)PEEEEK ddPTM_A459_MK2206_30min_R1 1 RRDEQLSPEEEEK 13 2 P15408;P15408-3;P15408-2;C9JCN8 P15408 FOSL2 Fos-related antigen 2 1 RRDEQLS(1)PEEEEK 82.837 0.036442 6341200 2035.2 2051.7 2431.8 2129.2 1732.4 1533.5 1878.4 2195.1 1790.4 2181.7 TRUE FALSE 1862.095553 1918.133957 2266.736191 2293.191353 1663.39484 1620.325445 1753.095363 2175.908472 1976.518487 2451.985467 0.759423568 0.782277865 0.924449277 0.935238558 0.678386908 0.660821798 0.71496972 0.887406757 0.806088989 1 11.25973471 -8.942369716 1.230216189 0.999222908 0.788971468 0.316192307 0.091555048 2.207757529 4.912096425 0.098330975 0.029720842 1.14E-09 8.942369716 -0.21025144 RRDS(ph)DGVDGFEAEGK ddPTM_A459_MK2206_30min_R1 2 RRDSDGVDGFEAEGK 15 2 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK 122.44 0.0017615 37182000 7109.3 8139.3 8036.6 6333.2 6942.5 6389.8 6823.2 6433 7033.9 6828.6 TRUE FALSE 6504.616703 7609.430091 7491.097983 6820.984161 6665.965524 6751.584954 6368.036778 6376.756959 7765.099076 7674.578521 0.847553606 0.991511139 0.976092428 0.888776386 0.868577409 0.879733647 0.829757199 0.830893441 1.011794857 1 12.90587181 -4.485060824 15.32287592 0.910127451 0.609955691 0.078641031 0.067254355 1453240.567 18830066.6 0.01733291 11793077.15 3.27E-05 4.485060824 -0.30017176 RRDS(ph)DGVDGFEAEGK ddPTM_A459_MK2206_30min_R2 5 RRDSDGVDGFEAEGK 15 2 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK 207.21 6.14E-05 175335000 350200 358974 356744 339111 355171 298589 391574 334286 305724 357976 TRUE FALSE 377011.5813 341147.8732 368637.6669 311404.5465 341225.2019 309952.0136 340159.8634 377978.328 332315.3209 346295.2724 1.088699764 0.985135808 1.064518335 0.899245734 0.985359111 0.895051242 0.982282724 1.091491447 0.959629967 1 18.40164317 RRDS(ph)GDNSAPSGQER ddPTM_A459_MK2206_30min_R2 1 RRDSGDNSAPSGQER 15 2 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 RRDS(1)GDNSAPSGQER 120.08 0.0020726 9251600 4132.2 5834.4 7388.8 5939.5 5094.8 5749.6 6664.5 5918.4 5572.3 4768.9 TRUE FALSE 4448.564409 5544.67218 7635.138904 5454.22385 4894.752553 5968.405057 5789.443144 6691.955201 6056.968582 4613.291184 0.964293003 1.201890789 1.65503078 1.182284758 1.06101097 1.29374124 1.254948564 1.450581577 1.312938711 1 12.17158064 -6.907529891 20.1256195 1.290223486 1.22937937 0.00230765 0.19861896 24.57562783 5317.543877 0.072718116 0.064131424 1.24E-07 6.907529891 -0.060844117 RREDS(ph)YHVR ddPTM_A459_MK2206_30min_R2 2 RREDSYHVR 9 2 B1AVT0;P49760-2;P49760-3;P49760 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 RREDS(0.996)Y(0.004)HVR;RREDS(1)YHVR 73.666 0.024958 9637600 10853.6 18768.9 15188.5 17251.8 20754.4 21897.9 18266.3 13425.7 18716.3 14896.1 TRUE FALSE 11684.55996 17836.86372 15694.87701 15842.27275 19939.47797 22731.23993 15867.91287 15180.48509 20344.20994 14410.04148 0.810862341 1.237807937 1.089162515 1.099391197 1.383721067 1.577458328 1.10117052 1.053465746 1.411807869 1 13.81478687 -4.760269127 24.91044462 1.223947677 0.810861829 0.32054384 0.177187224 35.33618298 751843.8376 0.045538249 0.2729796 1.74E-05 4.760269127 -0.413085848 RREEEGLQLR ddPTM_A459_MK2206_30min_R1 1 RREEEGLQLR 10 2 C9J352;C9JWD9;F2Z3G4;C9J4U1;C9JYI4;P52294 C9J352 KPNA1 "Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed" 0 88.496 0.020402 3075100 1892.9 1893.2 1801.8 1676.5 2201.7 1861 1894.1 1917.5 1446.2 1397.9 FALSE TRUE 1731.898915 1769.952336 1679.498836 1805.62432 2114.001627 1966.368212 1767.748045 1900.7355 1596.537665 1571.082406 1.102360327 1.126581476 1.069007475 1.149286832 1.345570175 1.251600938 1.125178437 1.209825464 1.016202371 1 10.61754314 -8.271975068 22.69031099 1.008100987 1.173515289 0.425750329 0.076328963 240.4566206 517842.5389 0.077914807 0.021171624 5.35E-09 8.271975068 0.165414301 RREEEGLQLR ddPTM_A459_MK2206_30min_R2 2 RREEEGLQLR 10 2 C9J352;C9JWD9;F2Z3G4;C9J4U1;C9JYI4;P52294 C9J352 KPNA1 "Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed" 0 ; 99.815 0.011474 6076800 13804.1 16831.5 15745.3 20479.1 18106.7 19098.5 17057.9 16004.4 18301.5 16468.7 FALSE TRUE 14860.95251 15995.67219 16270.24044 18805.89202 17395.73998 19825.3068 14818.17724 18096.23003 19893.33139 15931.32767 0.932813185 1.004038867 1.021273354 1.180434702 1.091920293 1.244422763 0.930128207 1.135889639 1.248692626 1 13.95957888 -5.578948491 4.628245356 1.1205504 0.977000399 0.299225153 0.094923454 0.246413429 10.91931017 0.025660996 0.046868179 2.64E-06 5.578948491 -0.143550001 RREEEMMIR ddPTM_A459_MK2206_30min_R1 1 RREEEMMIR 9 2 P23246;P23246-2;H0Y9K7 P23246 SFPQ "Splicing factor, proline- and glutamine-rich" 0 83.647 0.024276 13885000 1856.6 1879.9 1834 2035.2 2201.8 2140.5 2481.2 1800.2 1743 1674.3 FALSE TRUE 1698.686421 1757.518168 1709.51319 2191.951457 2114.097644 2261.69326 2315.683675 1784.461041 1924.191087 1881.724924 0.902728342 0.933993139 0.908481983 1.164862849 1.123489207 1.201925548 1.230617528 0.948311317 1.022567678 1 10.87784003 -5.752317846 24.9981952 1.107486084 0.916960287 0.493271685 0.085025835 170.9632181 468531.9239 0.024990435 0.042515154 1.77E-06 5.752317846 -0.190525797 RREEEMMIR ddPTM_A459_MK2206_30min_R2 2 RREEEMMIR 9 2 P23246;P23246-2;H0Y9K7 P23246 SFPQ "Splicing factor, proline- and glutamine-rich" 0 ; 131.62 0.0022582 22103500 17242.7 19689.2 17807.7 21049.3 18113.7 21312 26909 16735.3 20632.5 19862.9 FALSE TRUE 18562.81437 18711.46296 18401.39983 19329.50486 17402.46512 22123.04309 23375.81598 18922.66117 22427.07755 19214.7752 0.966069817 0.973805978 0.957669275 1.005970908 0.905681432 1.151355812 1.216554226 0.984797427 1.167178763 1 14.22992848 -6.765703895 24.99994208 1.110063156 0.964724352 0.50424489 0.070309645 88.82957192 520743.0348 0.023603215 0.021545412 1.72E-07 6.765703895 -0.145338804 RREEGPPPPS(ph)PDGASSDAEPEPPSGR ddPTM_A459_MK2206_30min_R2 1 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JR83;Q9NTJ3-2;Q9NTJ3;C9JWF0;C9IYK2;C9JJ64;E9PD53;F8WCB7 C9JR83 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 RREEGPPPPS(0.392)PDGAS(0.265)S(0.265)DAEPEPPS(0.079)GR 66.772 0.0016028 25450000 5965.6 7494.5 4162.9 7180.9 5411.7 7566.7 6785.9 6115.2 6498.6 7085 TRUE FALSE 6422.330923 7122.334028 4301.689008 6594.197499 5199.209466 7854.656071 5894.903179 6914.477637 7063.836481 6853.81703 0.937044408 1.039177731 0.62763406 0.962120446 0.758585974 1.146026519 0.860090538 1.008850631 1.030642699 1 12.74269196 -6.751431577 24.99989086 1.000360785 0.866812253 0.250289225 0.124309585 324.2734423 810046.7716 0.040375988 0.039924207 1.77E-07 6.751431577 -0.133548533 RREEGPPPPSPDGAS(ph)SDAEPEPPSGR ddPTM_A459_MK2206_30min_R1 4 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JR83;Q9NTJ3-2;Q9NTJ3;C9JWF0;C9IYK2;C9JJ64;E9PD53;F8WCB7 C9JR83 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 RREEGPPPPS(0.003)PDGAS(0.487)S(0.487)DAEPEPPS(0.023)GR;RREEGPPPPS(0.046)PDGAS(0.448)S(0.448)DAEPEPPS(0.059)GR;RREEGPPPPS(0.009)PDGAS(0.492)S(0.492)DAEPEPPS(0.007)GR;RREEGPPPPS(0.002)PDGAS(0.498)S(0.498)DAEPEPPS(0.001)GR 101.59 1.54E-06 136781800 5745.47 5941.13 5759.34 5447.67 5910.76 5334.75 6043.58 5758.98 4521.28 3899.21 TRUE FALSE 5256.787606 5554.361357 5368.412047 5867.250487 5675.321913 5636.798935 5640.423805 5708.629845 4991.283236 4382.273572 1.199557152 1.267461117 1.225028962 1.33885993 1.295063355 1.286272717 1.287099884 1.30266396 1.138971165 1 12.09746383 -8.514790718 3.063318265 1.00080199 1.276590749 0.843969043 0.037715243 0.08464453 1.953061506 0.037419494 0.009973203 3.06E-09 8.514790718 0.275788759 RREEGPPPPSPDGAS(ph)SDAEPEPPSGR ddPTM_A459_MK2206_30min_R2 2 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JR83;Q9NTJ3-2;Q9NTJ3;C9JWF0;C9IYK2;C9JJ64;E9PD53;F8WCB7 C9JR83 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 RREEGPPPPS(0.001)PDGAS(0.499)S(0.499)DAEPEPPSGR;RREEGPPPPS(0.03)PDGAS(0.481)S(0.481)DAEPEPPS(0.009)GR 50.029 0.013425 104007000 15921.3 22569 17721.8 18036.1 23079 20896 22820.8 18757.9 18958.4 18447 TRUE FALSE 17140.24697 21448.25628 18312.63597 16562.49294 22172.8025 21691.21192 19824.40155 21209.62194 20607.36736 17845.0759 0.96050289 1.201914545 1.026201069 0.928126786 1.24251657 1.215529261 1.110917188 1.188541985 1.154792923 1 14.12323842 -6.271219727 24.99525757 1.162594107 1.041310817 0.292992858 0.091866017 894.2774417 2285465.929 0.028050543 0.032194292 5.36E-07 6.271219727 -0.12128329 RREEGPPPPSPDGASS(ph)DAEPEPPSGR ddPTM_A459_MK2206_30min_R1 1 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JR83;Q9NTJ3-2;Q9NTJ3;C9JWF0;C9IYK2;C9JJ64;E9PD53;F8WCB7 C9JR83 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 RREEGPPPPSPDGAS(0.169)S(0.439)DAEPEPPS(0.392)GR 108.08 3.12E-08 46189000 2478.9 2798.9 2678 2071.8 3132.4 2643.4 3002.5 2689.6 1840.6 2160.7 TRUE FALSE 2268.056538 2616.691101 2496.224821 2231.370395 3007.629875 2793.067024 2802.208703 2666.085111 2031.936957 2428.383828 0.93397778 1.077544279 1.027936685 0.918870554 1.238531504 1.150175269 1.153939781 1.09788456 0.836744559 1 11.24578076 -4.75808834 24.05605772 1.06538188 0.933977479 0.090526054 0.112087061 144.9998789 1040629.839 0.028607336 0.198815684 1.75E-05 4.75808834 -0.131404401 RREEGPPPPSPDGASS(ph)DAEPEPPSGR ddPTM_A459_MK2206_30min_R2 1 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JR83;Q9NTJ3-2;Q9NTJ3;C9JWF0;C9IYK2;C9JJ64;E9PD53;F8WCB7 C9JR83 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 RREEGPPPPS(0.102)PDGAS(0.271)S(0.625)DAEPEPPS(0.002)GR 50.534 0.035535 53149000 8518.4 11639 8330.6 10934 13143 11316 8332.5 8126.4 8326 7676.2 TRUE FALSE 9170.575254 11061.02418 8608.338046 10040.65722 12626.93978 11746.63831 7238.432741 9188.548382 9050.18043 7425.726223 1.23497352 1.489554537 1.159258743 1.352144817 1.700431635 1.581884109 0.974777756 1.237393907 1.218760315 1 12.85831641 -7.262436523 24.99882496 1.127515821 1.420733264 0.456256582 0.166284434 97.47248611 2443622.563 0.07138495 0.051266928 5.46E-08 7.262436523 0.293217442 RREPES(ph)PPASAPIPLFGADTIGQR ddPTM_A459_MK2206_30min_R2 1 RREPESPPASAPIPLFGADTIGQR 24 2 Q96AY4 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 RREPES(0.744)PPAS(0.256)APIPLFGADTIGQR 44.312 0.030256 4322500 8498.2 11860 11620 15185 11241 16222 11767 9167.5 13616 11825 TRUE FALSE 9148.828726 11271.04965 12007.405 13944.33693 10799.62186 16839.33958 10221.97877 10365.72373 14800.29507 11439.15122 0.79978213 0.985304716 1.049676219 1.219001013 0.944092936 1.472079463 0.893595912 0.906161963 1.293828081 1 13.48169239 -4.803634801 1.708675754 1.100472518 0.705216685 0.217411166 0.175021052 1.41017387 4.270093584 0.047573942 0.912365192 1.57E-05 4.803634801 -0.395255832 RRES(ph)QEEPR ddPTM_A459_MK2206_30min_R2 1 RRESQEEPR 9 2 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;H0YD62;H0YF37 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 RRES(1)QEEPR 84.605 0.041004 14848000 32062 27147 33928 30752 34764 25140 30003 69082 63289 37811 TRUE FALSE 34516.69137 25798.91946 35059.14259 28239.46323 33398.99068 26096.72032 26063.57006 78111.25459 68793.76282 36577.23017 0.943666079 0.705327313 0.958496377 0.772050347 0.913108798 0.713469013 0.712562705 2.135515845 1.88078109 1 15.15865821 -7.750934104 24.99992841 1.756111368 0.8160958 0.650803125 0.285064931 103.7082888 246801.1722 0.127493453 0.072604299 1.77E-08 7.750934104 -0.940015567 RRFS(ph)DSEGEETVPEPR ddPTM_A459_MK2206_30min_R2 1 RRFSDSEGEETVPEPR 16 2 A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286 A0A1B0GWH8 CLN3 Battenin 1 RRFS(0.499)DS(0.499)EGEET(0.003)VPEPR 72.968 0.040613 3916200 9795 12934 8533.8 11154 11054 8051.7 11649 10081 11576 12513 TRUE FALSE 10544.91273 12291.71637 8818.312633 10242.68252 10619.96442 8358.113086 10119.47231 11398.62131 12582.85956 12104.70183 0.871141881 1.015449743 0.728503085 0.84617388 0.877342091 0.690484838 0.835995173 0.941668904 1.039501817 1 13.56327992 -7.939505117 3.265037964 1.015604427 0.836793683 0.44252565 0.08307881 0.241699631 5.114912893 0.058202438 0.023420067 1.15E-08 7.939505117 -0.178810745 RRGS(ph)SGSVDETLFALPAASEPVIR ddPTM_A459_MK2206_30min_R2 3 RRGSSGSVDETLFALPAASEPVIR 24 2 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 RRGS(0.332)S(0.332)GS(0.332)VDET(0.003)LFALPAASEPVIR;RRGS(0.363)S(0.363)GS(0.271)VDET(0.003)LFALPAASEPVIR;RRGS(0.443)S(0.443)GS(0.114)VDETLFALPAASEPVIR 74.308 0.0082027 3829600 12144.9 17748.9 12783.7 17158 20841.8 23375.6 20730.6 8306.5 25575.4 12862.1 TRUE FALSE 13074.72288 16867.51544 13209.90218 15756.13651 20023.44621 24265.17484 18008.64732 9392.18807 27799.90206 12442.41073 1.050819103 1.355646892 1.0616835 1.26632506 1.609289923 1.950198829 1.447359978 0.754852759 2.234285836 1 13.60297842 -6.099366533 4.978298936 1.505452535 1.174039497 0.131741726 0.402941115 0.48683078 18.99602183 0.117991039 0.155472983 7.95E-07 6.099366533 -0.331413038 RRNDSYTEEEPEWFSAGPTSQSET(ph)IELTGFDDK ddPTM_A459_MK2206_30min_R1 1 RRNDSYTEEEPEWFSAGPTSQSETIELTGFDDK 33 2 Q9NRA8;Q9NRA8-3;B1AKL4 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 RRNDS(0.003)Y(0.003)T(0.003)EEEPEWFS(0.012)AGPT(0.012)S(0.068)QS(0.417)ET(0.467)IELT(0.016)GFDDK 48.947 0.015468 3520600 932.45 996.88 1031.3 875.77 837.21 890.07 1045.2 1385.6 1084 909.46 TRUE FALSE 853.140231 931.9829308 961.2982294 943.2219571 803.8621529 940.4649942 975.4766151 1373.485845 1196.685679 1022.130771 0.834668376 0.911804005 0.940484581 0.922799689 0.786457248 0.920102418 0.954355982 1.343747673 1.170775514 1 9.99736407 -7.614710766 6.235436509 1.191067156 0.890832269 0.670985867 0.089119264 0.112290166 6.26823354 0.041255082 0.023508538 2.43E-08 7.614710766 -0.300234888 RRPES(ph)APAESSPSK ddPTM_A459_MK2206_30min_R1 1 RRPESAPAESSPSK 14 2 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 RRPES(0.886)APAES(0.106)S(0.008)PSK 88.781 0.023006 5530500 994.15 1352.3 944.88 808.37 801.76 904.35 1378.2 847.21 885.66 1110.4 TRUE FALSE 909.592322 1264.265024 880.7441782 870.6307975 769.8242014 955.5535155 1286.262793 839.8029323 977.7275264 1247.964735 0.728860597 1.013061498 0.705744444 0.697640545 0.616863746 0.765689517 1.030688413 0.672938032 0.783457656 1 10.28536145 -7.035207726 24.98006483 0.852183446 0.754275537 0.147189124 0.135139481 1514.172827 1074309.24 0.053541735 0.041492589 9.22E-08 7.035207726 -0.097907909 RRPESAPAES(ph)SPSK ddPTM_A459_MK2206_30min_R1 2 RRPESAPAESSPSK 14 2 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 RRPES(0.008)APAES(0.723)S(0.267)PS(0.001)K;RRPES(0.004)APAES(0.99)S(0.004)PS(0.001)K 91.547 0.019034 4894400 2232.8 2244.8 2137.08 1833.65 1542.6 1697.82 1926.15 1704.67 1528.68 1838.27 TRUE FALSE 2042.888635 2098.663112 1992.020964 1974.878041 1481.154975 1793.949101 1797.660048 1689.76625 1687.591756 2066.008766 0.988809278 1.015805522 0.96418805 0.955890446 0.716916114 0.868316307 0.870112498 0.817889197 0.816836687 1 11.01263066 -6.03270789 17.41700795 0.840877699 0.986859006 0.489058222 0.066899963 12.67586805 6749.931625 0.018771042 0.024320405 9.27E-07 6.03270789 0.145981307 RRPGAS(ph)PTGETPTIEEGEEDEDEASEAEGAR ddPTM_A459_MK2206_30min_R1 1 RRPGASPTGETPTIEEGEEDEDEASEAEGAR 31 2 P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035 P04920-2 SLC4A2 Anion exchange protein 2 1 RRPGAS(0.271)PT(0.271)GET(0.271)PT(0.188)IEEGEEDEDEASEAEGAR 94.031 1.25E-07 14337000 303.88 323.13 580.7 289.07 413.94 329.31 533.61 466.27 423.71 396.5 TRUE FALSE 278.0334103 302.0941783 541.2837019 311.3342215 397.4518933 347.9552476 498.0138505 462.1934505 467.7561708 445.6214134 0.623922913 0.677916656 1.21467166 0.698651842 0.891904835 0.780831525 1.117571633 1.037188601 1.049671664 1 8.79967475 -7.258497477 24.95434589 1.054207028 0.824856509 0.354112864 0.156059752 309.5358105 2625615.11 0.062402715 0.046191092 5.51E-08 7.258497477 -0.22935052 RRPGASPTGETPTIEEGEEDEDEAS(ph)EAEGAR ddPTM_A459_MK2206_30min_R2 1 RRPGASPTGETPTIEEGEEDEDEASEAEGAR 31 2 P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035 P04920-2 SLC4A2 Anion exchange protein 2 1 RRPGASPTGETPTIEEGEEDEDEAS(1)EAEGAR 53.097 0.0072981 4493800 17200 22502 17911 21634 16720 15040 17356 14698 13273 17302 TRUE FALSE 18516.84522 21384.5834 18508.1438 19866.433 16063.48879 15612.35774 15077.13635 16619.07907 14427.46155 16737.43716 1.106313054 1.27764981 1.105793177 1.186945935 0.959734076 0.932780664 0.900803164 0.992928542 0.861987496 1 14.03079102 -6.295232225 5.040936774 0.936705263 1.173138967 0.78321849 0.058719234 0.082165641 5.563416112 0.017158821 0.020102061 5.07E-07 6.295232225 0.236433704 RRPS(ph)GSEQSDNESVQSGR ddPTM_A459_MK2206_30min_R2 1 RRPSGSEQSDNESVQSGR 18 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 RRPS(0.908)GS(0.092)EQSDNESVQSGR 86.573 0.0081452 872790 0 711.13 0 667.36 0 778.02 0 607.87 574.56 516.22 TRUE FALSE 0 675.8163183 0 612.8345532 0 807.6280963 0 687.3206961 624.5341902 499.3757837 0 1.353322168 0 1.227201184 0 1.617275252 0 1.376359685 1.250629707 1 8.963982052 -7.805864106 24.99947068 1.235122048 0.645813241 0.17783588 0.593809023 228.9347514 128827.2442 0.292330394 0.140432032 1.56E-08 7.805864106 -0.589308807 RRS(ph)PGLCSDSLEK ddPTM_A459_MK2206_30min_R2 1 RRSPGLCSDSLEK 13 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RRS(1)PGLCSDSLEK 78.228 0.046935 10318000 35309 48118 44176 50843 60045 42193 48469 36525 51135 46174 TRUE FALSE 38012.28419 45728.53009 45648.80579 46688.96426 57687.3316 43798.68418 42104.96208 41298.94291 55582.62987 44667.34616 0.851008342 1.023757488 1.021972643 1.045259418 1.291487777 0.98055264 0.942634065 0.924589134 1.244368306 1 15.44693292 -4.43631586 1.642752716 1.055943004 0.564233319 0.222792117 0.114514781 4.569130645 5.741653163 0.03247658 4.715678425 3.66E-05 4.43631586 -0.491709685 RRS(ph)PPADAIPK ddPTM_A459_MK2206_30min_R1 1 RRSPPADAIPK 11 2 P18754-2;M0R1Q8;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4;C9JW69;P18754 P18754-2 RCC1 Regulator of chromosome condensation 1 RRS(1)PPADAIPK 101.61 0.017073 105060000 21963 24206 23744 22180 23458 21505 24428 22698 21205 18766 TRUE FALSE 20094.93152 22630.185 22132.32343 23888.30744 22523.61819 22722.59452 22798.45269 22499.55378 23409.33563 21090.87376 0.952778522 1.072984707 1.049379162 1.132637164 1.067931962 1.0773662 1.08096293 1.066790975 1.109927256 1 14.36433124 -4.759476616 5.778266479 1.07685398 0.947424325 0.538625104 0.03326587 0.102189734 11.99076296 0.00766444 0.052590782 1.74E-05 4.759476616 -0.129429655 RRS(ph)PPADAIPK ddPTM_A459_MK2206_30min_R2 1 RRSPPADAIPK 11 2 P18754-2;M0R1Q8;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4;C9JW69;P18754 P18754-2 RCC1 Regulator of chromosome condensation 1 RRS(1)PPADAIPK 84.759 0.0405 209550000 271170 339990 278380 289450 281430 291660 348310 276850 274430 319100 TRUE FALSE 291930.9837 323106.591 287661.0503 265801.0091 270379.6441 302759.3257 302576.4786 313035.2456 298299.4253 308687.7931 0.945715996 1.046709971 0.931883465 0.861067444 0.87590002 0.980794616 0.98020228 1.014083655 0.966346684 1 18.23578891 -6.97095105 24.660025 0.989784203 0.934009281 0.256755457 0.047829035 300.165999 254813.726 0.019080333 0.016827041 1.07E-07 6.97095105 -0.055774922 RRS(ph)PSLSSK ddPTM_A459_MK2206_30min_R2 1 RRSPSLSSK 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RRS(0.999)PS(0.001)LSSK 83.045 0.044989 16338000 13402 15085 10817 14047 13602 13348 13191 19364 19005 14152 TRUE FALSE 14428.06742 14335.90084 11177.63338 12899.31517 13067.91714 13855.96749 11459.00585 21894.94129 20658.02055 13690.2214 1.053895843 1.04716355 0.816468416 0.942228383 0.954543886 1.012106897 0.837021223 1.599312432 1.508961758 1 13.74085816 -7.7562774 24.99998488 1.415602847 0.952415195 0.571252435 0.164297105 76.50844792 370543.6609 0.076360512 0.042369334 1.75E-08 7.7562774 -0.463187652 RRS(ph)QSIEQESQEK ddPTM_A459_MK2206_30min_R2 1 RRSQSIEQESQEK 13 2 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 RRS(0.997)QS(0.003)IEQESQEK 101.01 0.011829 4302000 7501.9 11619 10240 12578 12797 12700 10293 6845 8816.9 7940.4 TRUE FALSE 8076.251232 11042.01736 10581.39649 11550.33716 12294.52548 13183.3074 8941.516736 7739.665002 9583.778025 7681.305398 1.051416499 1.437518336 1.377551854 1.503694563 1.600577616 1.716284761 1.164062132 1.007597615 1.247675692 1 12.9071358 -7.449995867 8.475615053 1.093658885 1.45328838 0.487912694 0.173441082 0.314835374 34.19082299 0.075984394 0.050996673 3.55E-08 7.449995867 0.359629496 RRS(ph)SDEDAAGEPK ddPTM_A459_MK2206_30min_R2 2 RRSSDEDAAGEPK 13 2 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 RRS(0.5)S(0.5)DEDAAGEPK;RRS(0.773)S(0.227)DEDAAGEPK 110.32 0.0063691 39818000 77428 89019 72314 79563 79972 63751 82781 70467 62217 82266 TRUE FALSE 83355.94721 84598.44591 74724.91267 73062.44839 76831.89745 66177.08898 71911.75526 79677.27885 67628.5222 79581.66716 1.047426501 1.063039377 0.938971441 0.9180814 0.965447197 0.831561983 0.903622126 1.001201429 0.849800269 1 16.2801485 -5.306415541 4.509269331 0.921962887 1.056438498 0.486239683 0.053134052 0.153614553 7.084873264 0.013649084 0.031550362 4.94E-06 5.306415541 0.134475611 RRSSSS(ph)S(ph)S(ph)SSS(ph)ASR ddPTM_A459_MK2206_30min_R2 1 RRSSSSSSSSSASR 14 2 F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8;Q8N2M8-4 F5H0Q6 CLASRP CLK4-associating serine/arginine rich protein 4 RRS(0.187)S(0.368)S(0.457)S(0.503)S(0.503)S(0.982)S(0.27)S(0.206)S(0.506)AS(0.019)R 77.372 0.03334 3567000 0 0 0 2187 1180.8 1222.9 0 0 0 741.16 TRUE FALSE 0 0 0 2008.315104 1134.435859 1269.438316 0 0 0 716.9760099 0 0 0 2.801091078 1.582250791 1.770545038 0 0 0 1 9.485781037 -5.608001644 24.99444693 1.023677856 3.41E-07 0.234157344 0.846958036 38.64499963 11341.03408 0.258438095 0.447627969 2.47E-06 5.608001644 -1.023677514 RRT(ph)ASPPPPPKR ddPTM_A459_MK2206_30min_R1 1 RRTASPPPPPKR 12 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RRT(0.869)AS(0.131)PPPPPKR 73.9 0.02628 895730 337.31 283.51 253.09 255.3 323.15 299.39 339.51 260.66 279.52 129.41 TRUE FALSE 308.6200132 265.0534475 235.9109559 274.9632502 310.2782512 316.3412031 316.8619074 258.3810771 308.5771043 145.4422878 2.12194141 1.822396027 1.622024512 1.890531663 2.133342757 2.175029064 2.178609208 1.776519615 2.121646386 1 7.184302988 -10.86198012 5.915906085 0.99988009 1.974252199 0.716100688 0.185513351 0.000318049 3.55E-05 0.194715202 0.047219688 1.37E-11 10.86198012 0.97437211 RRT(ph)CETGEPMEAESGDTSSEGPAQVYLPGR ddPTM_A459_MK2206_30min_R1 2 RRTCETGEPMEAESGDTSSEGPAQVYLPGR 30 2 Q9BQ67 Q9BQ67 GRWD1 Glutamate-rich WD repeat-containing protein 1 1 RRT(0.497)CET(0.497)GEPMEAES(0.003)GDT(0.001)S(0.001)S(0.001)EGPAQVYLPGR;RRT(0.5)CET(0.5)GEPMEAESGDTSSEGPAQVYLPGR 98.326 2.19E-07 15855400 824.9 798.54 998.03 656.24 880.39 679.69 923.3 680.06 726.48 676.14 TRUE FALSE 754.7379233 746.5549009 930.2865043 706.7837185 845.322202 718.1734604 861.7083417 674.1143071 802.0001957 759.9053278 0.993199936 0.98243146 1.224213689 0.930094438 1.112404626 0.945082807 1.133968022 0.887103015 1.055394885 1 9.569675883 -7.760430204 24.99998297 0.97843674 1.044554295 0.090488473 0.094391492 65.26536299 1616937.007 0.044420594 0.023748508 1.74E-08 7.760430204 0.066117556 RRT(ph)CETGEPMEAESGDTSSEGPAQVYLPGR ddPTM_A459_MK2206_30min_R2 1 RRTCETGEPMEAESGDTSSEGPAQVYLPGR 30 2 Q9BQ67 Q9BQ67 GRWD1 Glutamate-rich WD repeat-containing protein 1 1 RRT(0.5)CET(0.5)GEPMEAESGDTSSEGPAQVYLPGR 75.193 6.00E-05 13229000 20885 19274 23108 27974 25033 26544 26548 21764 21596 27864 TRUE FALSE 22483.97166 18316.88119 23878.40919 25688.43472 24050.07864 27554.15052 23062.21571 24608.62953 23474.38104 26954.79996 0.834136098 0.679540609 0.885868536 0.953018934 0.892237326 1.022235393 0.855588457 0.912959086 0.870879438 1 14.71825458 -5.426973678 5.613734452 0.924826973 0.758561044 0.555647023 0.060754218 0.151641034 7.070259305 0.015151569 0.032041079 3.74E-06 5.426973678 -0.166265929 RRT(ph)DT(ph)MRLLER ddPTM_A459_MK2206_30min_R1 1 RRTDTMRLLER 11 3 A0A0A0MTS7;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12;A0A0A0MRA3;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9 A0A0A0MTS7 TTN Titin 2 RRT(1)DT(1)MRLLER 62.582 0.034652 0 405.6 381.51 300.9 304.93 335.69 222.69 222.98 442.51 351.37 186.06 TRUE FALSE 371.1015901 356.6736297 280.4757464 328.4157614 322.3187565 235.2985154 208.1054111 438.6411817 387.8961689 209.1105175 1.774667265 1.705670446 1.341279959 1.570536793 1.541379938 1.125235202 0.99519342 2.097652414 1.854981632 1 7.708121816 -5.133734076 5.448114208 1.461590231 1.757337331 0.110678227 0.337140789 0.552200442 21.72700075 0.090868521 0.254673547 7.35E-06 5.133734076 0.2957471 RRVNDAEPGS(ph)PEAPQGK ddPTM_A459_MK2206_30min_R2 2 RRVNDAEPGSPEAPQGK 17 2 Q8N8A6 Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 1 RRVNDAEPGS(1)PEAPQGK;RRVNDAEPGS(1)PEAPQGK 105.95 0.0060178 0 7179.9 19975.6 12670.6 16608.1 23719 16516.3 17629 10934.5 23700 11026.6 TRUE FALSE 7729.598664 18983.64075 13093.03148 15251.1651 22787.67288 17144.83937 15314.29112 12363.67669 25761.38316 10666.80295 0.724640617 1.779693583 1.227456019 1.429778461 2.136317039 1.607308156 1.43569645 1.159079882 2.415098816 1 13.38084022 -4.753186591 24.99857861 1.580216294 0.724639036 0.274262535 0.415784369 410.2949623 1242730.795 0.098810713 1.090637787 1.77E-05 4.753186591 -0.855577258 RRVS(ph)EVEEEKEPVPQPLPSDDTR ddPTM_A459_MK2206_30min_R1 3 RRVSEVEEEKEPVPQPLPSDDTR 23 3 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR 73.315 0.00092664 160165000 9345 9474 8873.4 6825.9 8699.8 8078.3 8985.4 8664.2 8704.2 7041.5 TRUE FALSE 8550.158677 8857.240878 8271.098331 7351.632001 8353.268544 8535.686365 8386.000361 8588.449813 9609.032738 7913.854181 1.080403869 1.119206985 1.045141614 0.928957223 1.055524698 1.078575138 1.059660713 1.085242363 1.214203916 1 12.95016477 -7.918044113 4.265796581 1.119259557 1.051385851 0.092059073 0.066868861 0.416357675 14.05118623 0.040688933 0.018088769 1.21E-08 7.918044113 -0.067873707 RRVS(ph)EVEEEKEPVPQPLPSDDTR ddPTM_A459_MK2206_30min_R2 2 RRVSEVEEEKEPVPQPLPSDDTR 23 3 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR 62.792 0.0048868 125832000 37627 38681 33118 34769 28964 21523.4 40706 27028 27568 35791 TRUE FALSE 40507.75205 36760.15779 34222.13759 31928.26148 27826.72783 22342.48807 35361.2533 30560.6524 29965.81481 34623.1426 1.169961737 1.061722161 0.988418007 0.922165323 0.803703123 0.64530503 1.02131842 0.882665469 0.865485122 1 15.07944906 -5.345034552 1.4012705 0.862800615 1.164669238 0.491717079 0.09947522 0.478802945 1.561933134 0.031927181 0.151280757 4.52E-06 5.345034552 0.301868623 RRYEDDGIS(ph)DDEIEGK ddPTM_A459_MK2206_30min_R2 2 RRYEDDGISDDEIEGK 16 2 I3VM54;Q9Y2K7-3;Q9Y2K7 I3VM54 KDM2A Lysine-specific demethylase 2A 1 RRYEDDGIS(1)DDEIEGK;RRY(0.009)EDDGIS(0.991)DDEIEGK 109.83 0.0032806 32646000 67659 83452 81083 84069 79830 55947 90318 64702 64417 74715 TRUE FALSE 72839.02506 79307.89503 83786.26675 77200.29378 76695.47309 58076.10229 78459.13811 73158.77356 70019.87422 72277.05567 1.007775211 1.097276228 1.159237409 1.068116196 1.061131674 0.803520588 1.085533125 1.01219914 0.968770429 1 16.14125012 -6.543903192 24.99993142 0.976247462 1.08643611 0.332593592 0.074586349 282.0426772 335371.3445 0.024668301 0.024670217 2.86E-07 6.543903192 0.110188648 RS(ph)AQY(ph)S(ph)Y(ph)PVDK ddPTM_A459_MK2206_30min_R2 1 RSAQYSYPVDK 11 1 H0YAV0;A1KZ92 H0YAV0 PXDNL Peroxidasin-like protein 4 RS(1)AQY(1)S(1)Y(1)PVDK 45.879 0.040663 2400800 2608.4 2483.3 2779.1 2836.8 2539.4 2475.9 3159.3 2192.8 2963.9 2466.3 TRUE FALSE 2808.10111 2359.982933 2871.753807 2605.024366 2439.690397 2570.122109 2744.480115 2479.406489 3221.694664 2385.824833 1.176993831 0.989168568 1.203673366 1.091875786 1.022577334 1.077246776 1.150327584 1.039224026 1.350348366 1 11.22027241 RS(ph)ASASHQADIK ddPTM_A459_MK2206_30min_R2 1 RSASASHQADIK 12 1 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 RS(0.461)AS(0.461)AS(0.077)HQADIK 64.537 0.041597 16960000 89179 57736 49699 66773 57339 77942 132340 55182 74478 58199 TRUE FALSE 96006.61281 54868.9142 51355.93985 61317.4323 55087.58275 80908.13743 114963.599 62394.47687 80955.96181 56299.9714 1.7052693 0.974581564 0.91218412 1.089120132 0.978465555 1.437090205 2.041983258 1.108250596 1.437939662 1 15.78084657 -6.778458474 22.94440611 1.45162696 1.108597214 0.135782258 0.331762412 154.9215027 208855.4138 0.116243547 0.102865352 1.67E-07 6.778458474 -0.343029747 RS(ph)ASPDDDLGSSNWEAADLGNEER ddPTM_A459_MK2206_30min_R1 2 RSASPDDDLGSSNWEAADLGNEER 24 1 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 RS(0.709)AS(0.291)PDDDLGSSNWEAADLGNEER;RS(0.769)AS(0.231)PDDDLGSSNWEAADLGNEER 144.04 5.57E-09 169882000 3018.11 2718 2917.81 3009.58 3508.38 2833.24 2831.54 2538.06 2317.92 2068.82 TRUE FALSE 2761.403896 2541.057706 2719.757187 3241.378373 3368.633795 2993.6556 2642.653133 2515.870009 2558.876079 2325.12104 1.187638771 1.09287115 1.169727141 1.39406866 1.448799326 1.287526777 1.136565833 1.082038296 1.100534568 1 11.18309011 -7.447707005 3.27936835 1.071351398 1.265250903 0.453055629 0.101024161 0.291587336 6.074785352 0.056775881 0.034609111 3.57E-08 7.447707005 0.193899505 RS(ph)ASPDDDLGSSNWEAADLGNEER ddPTM_A459_MK2206_30min_R2 7 RSASPDDDLGSSNWEAADLGNEER 24 1 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 RS(0.59)AS(0.41)PDDDLGSSNWEAADLGNEER;RS(0.5)AS(0.5)PDDDLGSSNWEAADLGNEER;RS(0.791)AS(0.208)PDDDLGS(0.001)SNWEAADLGNEER;RS(0.487)AS(0.487)PDDDLGS(0.014)S(0.012)NWEAADLGNEER;RS(0.5)AS(0.5)PDDDLGSSNWEAADLGNEER;RS(0.499)AS(0.499)PDDDLGS(0.001)SNWEAADLGNEER;RS(0.73)AS(0.268)PDDDLGS(0.001)S(0.001)NWEAADLGNEER 148.61 7.45E-10 143897300 88631.5 227569.1 100586.8 166412.7 119295.8 118461.3 111273.7 92768.7 109074.3 124289.5 TRUE FALSE 95417.19579 216268.3494 103940.3137 152816.2501 114611.6475 122969.4278 96663.32953 104893.8876 118561.3855 120233.9438 0.793596157 1.798729565 0.864483942 1.270990914 0.953238693 1.022751345 0.8039604 0.87241493 0.986089133 1 16.87548472 -6.259419119 1.218144969 0.910503692 1.237764646 0.153231856 0.262952716 0.727028889 2.21189578 0.10095409 0.147055455 5.50E-07 6.259419119 0.327260954 RS(ph)ASPHDVDLCLVSPCEFEHR ddPTM_A459_MK2206_30min_R2 2 RSASPHDVDLCLVSPCEFEHR 21 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 RS(0.5)AS(0.5)PHDVDLCLVSPCEFEHR;RS(0.5)AS(0.5)PHDVDLCLVSPCEFEHR 95.666 0.00028183 11153700 11668.8 24218.3 22711.9 31163.2 27599.9 30286.3 23895 19580.5 24499.5 22447.7 TRUE FALSE 12562.1723 23015.65444 23469.10341 28617.06687 26516.18925 31438.86637 20757.5578 22139.73858 26630.42223 21715.23339 0.578495846 1.059885198 1.080766805 1.317833724 1.221087003 1.447779345 0.955898444 1.019548728 1.226347502 1 14.40641984 -4.57023188 1.805231191 1.171774229 0.086976627 0.587679918 0.14492018 1.228199438 2.582550671 0.040872815 2.723270768 2.69E-05 4.57023188 -1.084797603 RS(ph)CFESSPDPELK ddPTM_A459_MK2206_30min_R2 1 RSCFESSPDPELK 13 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RS(0.682)CFES(0.091)S(0.228)PDPELK 98.676 0.0063465 14334000 164420 195900 200620 194400 202630 143020 222480 173710 159920 196420 TRUE FALSE 177008.1216 186171.8909 207308.5707 178516.8981 194673.7281 148462.7263 193268.1088 196414.4934 173829.5525 190010.8315 0.931568586 0.979796201 1.091035543 0.939509062 1.024540162 0.781338228 1.017142587 1.033701563 0.914840229 1 17.53572214 -1.600644647 19.3914403 0.972429995 0.004893251 0 0.081201367 0 0 0.018377553 0 0.025081607 1.600644647 -0.967536744 RS(ph)DSASSEPVGIYQGFEK ddPTM_A459_MK2206_30min_R2 1 RSDSASSEPVGIYQGFEK 18 1 Q05655;Q05655-2 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit 1 RS(0.686)DS(0.111)AS(0.111)S(0.091)EPVGIYQGFEK 54.306 0.036814 6108000 18815 28116 27915 27974 28007 25553 29522 20027 24913 29541 TRUE FALSE 20255.49087 26719.80032 28845.67217 25688.43472 26907.30446 26525.43732 25645.72594 22644.59766 27079.88771 28577.07959 0.708801989 0.93500808 1.009398881 0.898917422 0.941569427 0.92820672 0.89742291 0.792404192 0.947608646 1 14.80257087 -4.759400809 24.99950473 0.922485273 0.708801718 0.566441252 0.057316761 42.25246675 518021.6645 0.014695474 0.093698624 1.74E-05 4.759400809 -0.213683555 RS(ph)DSLLSFR ddPTM_A459_MK2206_30min_R1 1 RSDSLLSFR 9 1 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 RS(0.952)DS(0.048)LLSFR 105.2 0.0071269 11375000 1617.4 1551.8 1954 1321.4 1829.9 1603 1533.6 1565.3 1120.3 1378.1 TRUE FALSE 1479.831637 1450.777538 1821.367924 1423.174457 1757.011208 1693.760475 1431.296342 1551.614747 1236.759194 1548.829432 0.95545165 0.936692904 1.175964174 0.918871005 1.134412332 1.093574566 0.924114891 1.001798336 0.798512198 1 10.59696256 -7.280072898 23.74479203 0.931256192 1.036856377 0.226152251 0.094888868 681.8920486 868933.182 0.039002202 0.026357649 5.25E-08 7.280072898 0.105600186 RS(ph)DSLLSFR ddPTM_A459_MK2206_30min_R2 3 RSDSLLSFR 9 1 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 RS(0.896)DS(0.103)LLSFR;RS(0.999)DS(0.001)LLSFR;RS(0.687)DS(0.313)LLSFR 93.839 0.012339 8628700 10668.7 15187.5 16394.5 14883.5 15715.2 20070 16498.8 11882.5 13484.5 15356 TRUE FALSE 11485.50387 14433.31083 16941.08445 13667.47044 15098.14229 20833.77791 14332.48774 13435.58355 14657.35744 14854.93498 0.773177661 0.971617234 1.140434776 0.920062623 1.016372156 1.402481932 0.964830056 0.904452532 0.986699535 1 13.85865467 -4.81743079 3.430775637 1.044111612 0.749673784 0.26005349 0.136152988 0.397580393 7.719670579 0.036192744 0.291250708 1.52E-05 4.81743079 -0.294437828 RS(ph)ESPPAELPSLR ddPTM_A459_MK2206_30min_R1 2 RSESPPAELPSLR 13 1 Q14669;Q14669-2;Q14669-3;G5E9G6;H7C1L9 Q14669;H7C1L9 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 RS(0.842)ES(0.158)PPAELPSLR;RS(0.686)ES(0.314)PPAELPSLR 145.79 0.00031706 34826300 3330.7 3086.9 3346 2939.5 3308.3 3135.8 3290.4 3072.3 2483.7 2607.5 TRUE FALSE 3047.406475 2885.942249 3118.882842 3165.900799 3176.523406 3313.346286 3070.90342 3045.439205 2741.889503 2930.536786 1.03987996 0.984782809 1.064270156 1.080314301 1.0839391 1.130627775 1.047897926 1.03920866 0.935627055 1 11.51694923 -8.096611944 4.307132611 0.968899946 1.062100724 0.486824274 0.037879071 0.211673434 6.595146373 0.030339313 0.010773857 8.01E-09 8.096611944 0.093200778 RS(ph)ESPPAELPSLR ddPTM_A459_MK2206_30min_R2 2 RSESPPAELPSLR 13 1 Q14669;Q14669-2;Q14669-3;G5E9G6;H7C1L9 Q14669;H7C1L9 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 RS(0.978)ES(0.021)PPAELPSLR;RS(0.842)ES(0.158)PPAELPSLR 143.64 0.0012784 17673500 40248 56731 49444 54517 51725 58920 55650 49969 48465 53356 TRUE FALSE 43329.41783 53913.82103 51092.43828 50062.78671 49694.0166 61162.24189 48343.08815 56500.11987 52680.3981 51614.99809 0.839473398 1.044537887 0.989875815 0.969927125 0.962782494 1.184970341 0.936609318 1.094645393 1.020641287 1 15.65550272 RS(ph)HLVEAHVR ddPTM_A459_MK2206_30min_R1 1 RSHLVEAHVR 10 1 Q9UNX9 Q9UNX9 KCNJ14 ATP-sensitive inward rectifier potassium channel 14 1 RS(1)HLVEAHVR 69.229 0.039826 60187000 5750.1 5233.8 5752.8 3803.7 6099.5 8359.7 8586.3 6982.2 7785.4 8114.7 TRUE FALSE 5261.0238 4893.078669 5362.315964 4096.661633 5856.543999 8833.01899 8013.523594 6921.155362 8594.72019 9120.010299 0.576865993 0.536521178 0.587972578 0.449194847 0.642164187 0.96853169 0.87867484 0.758897757 0.942402465 1 13.15481974 -6.621799369 4.63923488 0.89140796 0.541423891 0.859902839 0.071538842 0.077784852 2.886364094 0.023908777 0.023884452 2.39E-07 6.621799369 -0.349984069 RS(ph)HSPSIDGTPK ddPTM_A459_MK2206_30min_R1 1 RSHSPSIDGTPK 12 1 Q9BWT3-2;Q9BWT3;A0A0C4DH56 Q9BWT3-2 PAPOLG Poly(A) polymerase gamma 1 RS(0.965)HS(0.035)PS(0.001)IDGTPK 84.62 0.016623 5915900 3638.5 3362.9 3518.3 2845.9 3600.6 3159.5 3620.8 3684.1 2990.5 2846.5 TRUE FALSE 3329.026468 3143.974599 3279.487599 3065.091711 3457.180478 3338.38816 3379.263039 3651.890302 3301.373177 3199.14591 1.04059851 0.982754362 1.025113481 0.958096879 1.08065733 1.04352482 1.05630163 1.141520395 1.03195455 1 11.64347108 -6.278255457 24.97285378 1.065161153 1.001968393 0.320018278 0.040358411 850.9820387 1263753.873 0.012055051 0.013698157 5.27E-07 6.278255457 -0.06319276 RS(ph)LHLDKS(ph)S(ph)SRGGS(ph)R ddPTM_A459_MK2206_30min_R2 1 RSLHLDKSSSRGGSR 15 3 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 4 RS(0.999)LHLDKS(0.855)S(0.598)S(0.598)RGGS(0.951)R 70.335 0.03134 0 18093 10344 14196 16182 10739 12995 14526 10725 9734.8 13656 TRUE FALSE 19478.21399 9830.332002 14669.28755 14859.87884 10317.3329 13489.53383 12618.71875 12126.79432 10581.51531 13210.40584 1.474459924 0.744135504 1.110434284 1.124861645 0.78100045 1.021129403 0.955210529 0.917972882 0.800998504 1 13.68938717 -4.747433122 24.98846194 0.946182472 1.474461261 0.620178356 0.125491883 485.8510164 866753.5527 0.030759595 0.626973382 1.79E-05 4.747433122 0.528278789 RS(ph)LSGSSPCPK ddPTM_A459_MK2206_30min_R1 3 RSLSGSSPCPK 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RS(0.925)LS(0.038)GS(0.019)S(0.019)PCPK;RS(0.818)LS(0.132)GS(0.025)S(0.025)PCPK;RS(0.525)LS(0.195)GS(0.14)S(0.14)PCPK 149.57 0.0011293 18106700 14189 14702.9 14434.8 14011.8 15227.1 14611.7 15332.4 14796.7 11659.5 11544.3 TRUE FALSE 12982.15104 13745.73854 13455.00599 15090.99126 14620.57236 15439.00183 14309.60357 14667.33401 12871.54675 12974.49504 1.000590081 1.059443045 1.037035041 1.163127445 1.126870242 1.189950112 1.102902543 1.130474363 0.992065334 1 13.66339077 -5.695192339 11.81170849 1.111084807 1.034919384 0.192976039 0.061570807 0.959564562 167.6251974 0.01641959 0.028439896 2.02E-06 5.695192339 -0.076165424 RS(ph)LTVSDDAESSEPER ddPTM_A459_MK2206_30min_R2 2 RSLTVSDDAESSEPER 16 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RS(0.999)LT(0.001)VSDDAESSEPER;RS(0.99)LT(0.01)VSDDAESSEPER 84.874 0.015422 5006100 36380 38916 36021 38740 38217 30815 44319 33843 30021 37187 TRUE FALSE 39165.28077 36983.48803 37221.92216 35574.81808 36716.40855 31987.68642 38499.86206 38266.3963 32632.17231 35973.59124 1.088723128 1.028073283 1.034701315 0.988914836 1.020648962 0.889199141 1.070225706 1.063735785 0.907114669 1 15.13465057 -4.259532328 0.838394825 0.994196555 1.237317819 0.220180157 0.055484549 8.574695372 2.528625251 0.019838424 2.370943202 5.50E-05 4.259532328 0.243121264 RS(ph)PASIDR ddPTM_A459_MK2206_30min_R1 1 RSPASIDR 8 1 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 RS(1)PASIDR 88.155 0.016154 2963200 1252.1 1003 924.69 1071.5 1027.8 906.87 1096.2 961.1 413.77 908.34 TRUE FALSE 1145.60232 937.7045177 861.9246191 1154.027116 986.8605496 958.2161957 1023.074498 952.697204 456.7828722 1020.872017 1.122180157 0.918532884 0.844302327 1.130432705 0.966683907 0.938625195 1.002157451 0.933219041 0.447443817 1 9.995586297 -8.026796501 24.37902917 0.712591611 0.982239216 0.331027001 0.148350154 557.3574885 507070.6115 0.091617676 0.034882685 9.40E-09 8.026796501 0.269647604 RS(ph)PASIDR ddPTM_A459_MK2206_30min_R2 2 RSPASIDR 8 1 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 RS(1)PASIDR;RS(1)PASIDR 72.096 0.034332 16124000 15696.8 18341 21050.8 24414 22309.5 22742.2 21616.2 19769.4 19336.6 20313.1 TRUE FALSE 16898.55908 17430.21261 21752.62317 22419.2981 21433.51693 23607.67036 18777.96697 22353.32846 21018.46252 19650.28521 0.859965079 0.887020846 1.106987656 1.140914641 1.090748389 1.201390723 0.955607859 1.137557456 1.069626333 1 14.26226263 -5.241725308 6.497235123 1.094255117 0.871192334 0.620787167 0.066886959 0.099482897 18.12180591 0.016465734 0.041812609 5.73E-06 5.241725308 -0.223062784 RS(ph)PGPGPSQSPR ddPTM_A459_MK2206_30min_R2 2 RSPGPGPSQSPR 12 1 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 RS(0.993)PGPGPSQS(0.007)PR;RS(0.992)PGPGPS(0.001)QS(0.008)PR 83.081 0.018025 2927300 9250.3 13443 10585.3 11493.2 11468.8 14700.7 14951.1 12578.9 14666.2 14353.3 TRUE FALSE 9958.51008 12775.44017 10938.20862 10554.1688 11018.47729 15260.14544 12988.00261 14223.00542 15941.83957 13884.953 0.717215973 0.920092432 0.787774263 0.760115558 0.793555246 1.099041923 0.935401266 1.024346674 1.148137813 1 13.76123467 -6.753024405 24.99983257 1.036283189 0.800235658 0.746467786 0.071521818 96.85709926 287749.8793 0.023670308 0.023300164 1.77E-07 6.753024405 -0.23604753 RS(ph)PILLPK ddPTM_A459_MK2206_30min_R1 1 RSPILLPK 8 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 RS(1)PILLPK 73.951 0.031758 6356300 1592.6 2072.3 2102 1670.5 1693.6 1523.8 1750.5 1794.7 1625 1465.2 TRUE FALSE 1457.141007 1937.392893 1959.322097 1799.162199 1626.140326 1610.076239 1633.727339 1779.009127 1793.924565 1646.720038 0.884874765 1.176516256 1.189833154 1.092573211 0.987502604 0.977747402 0.992109953 1.0803349 1.089392565 1 10.68537958 -6.184299428 7.344290552 1.021666276 1.10037867 0.112882923 0.085291589 0.555375689 46.50018809 0.025893636 0.033500229 6.54E-07 6.184299428 0.078712394 RS(ph)PILLPK ddPTM_A459_MK2206_30min_R2 1 RSPILLPK 8 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 RS(1)PILLPK 125.23 0.0026405 12803000 43040 65967 55616 55398 71609 53294 64375 45878 52956 51318 TRUE FALSE 46335.17549 62691.1747 57470.20968 50871.80619 68797.27085 55322.14051 55922.48517 51874.41212 57562.01716 49643.49786 0.933358395 1.262827508 1.157658347 1.024742582 1.385826419 1.114388448 1.126481565 1.0449387 1.159507682 1 15.59931715 -8.901543638 0.676688514 1.001044118 1.150835333 0.095584157 0.119558622 3.085625823 2.638166596 0.127522801 0.045067551 1.25E-09 8.901543638 0.149791214 RS(ph)PLSDPPSQDPTPAATPETPPVISAVVHATDEEK ddPTM_A459_MK2206_30min_R2 2 RSPLSDPPSQDPTPAATPETPPVISAVVHATDEEK 35 1 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2;H0Y9Y7 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 RS(0.954)PLS(0.041)DPPS(0.004)QDPTPAATPETPPVISAVVHATDEEK;RS(0.722)PLS(0.246)DPPS(0.031)QDPT(0.001)PAATPETPPVISAVVHATDEEK 94.92 2.03E-11 22212400 62835 71470 67707 79386 73922 58860 90568 68032 57777 76826 TRUE FALSE 67645.69591 67920.90373 69964.31759 72899.90986 71019.45085 61099.95855 78676.31281 76924.01599 62802.33902 74319.17391 0.910205164 0.913908217 0.941403327 0.980903124 0.955600649 0.82212914 1.058627386 1.035049395 0.845035483 1 16.18144685 -7.281676346 24.99974015 0.987598834 0.925648357 0.182975096 0.065624475 1563.219254 1931116.073 0.027611393 0.018639823 5.23E-08 7.281676346 -0.061950477 RS(ph)PPAPGLQPMR ddPTM_A459_MK2206_30min_R1 2 RSPPAPGLQPMR 12 1 P15408;P15408-3;P15408-2;C9JCN8 P15408 FOSL2 Fos-related antigen 2 1 RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR 83.397 0.017717 18924500 4544.5 4628.4 4514.3 4188.4 4901.5 4046 4424.1 4137.7 4146.5 3192.8 TRUE FALSE 4157.966411 4327.090319 4207.881894 4510.991294 4706.262876 4275.081024 4128.976361 4101.524525 4577.543513 3588.348168 1.158741074 1.205872484 1.172651509 1.257121963 1.3115402 1.191378546 1.150662134 1.143011863 1.27566872 1 11.80910416 -10.61307469 5.110186286 0.999995362 1.206828946 0.570199559 0.054018747 3.03E-06 5.39E-07 0.055448236 0.013447871 2.44E-11 10.61307469 0.206833584 RS(ph)PPAPGLQPMR ddPTM_A459_MK2206_30min_R2 3 RSPPAPGLQPMR 12 1 P15408;P15408-3;P15408-2;C9JCN8 P15408 FOSL2 Fos-related antigen 2 1 RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR 116.58 0.0025544 73994600 93039.1 130667 111570 123323.4 138654 116707.9 126895.4 105079 116506 104349.3 TRUE FALSE 100162.245 124178.2668 115289.6881 113247.4837 133209.7473 121149.3009 110233.8816 118813.1861 126639.4813 100944.3909 0.992251716 1.230165101 1.14211089 1.121879906 1.31963496 1.200158819 1.092025823 1.177016227 1.254546985 1 16.62320122 -11.85751781 2.279070722 3.53E-06 1.172716556 0.257070117 0.086575266 1454870.981 601320.2689 7293267.643 0.021262071 1.39E-12 11.85751781 1.172713026 RS(ph)PPEEPPDFCCPK ddPTM_A459_MK2206_30min_R2 2 RSPPEEPPDFCCPK 14 1 A0A087X0G7;A0A087WUW6;A0A087X1B1;Q9Y6K9-3;Q9Y6K9;Q9Y6K9-2 A0A087X0G7 IKBKG NF-kappa-B essential modulator 1 RS(1)PPEEPPDFCCPK;RS(1)PPEEPPDFCCPK 166.62 0.0001178 23728600 118867 115888 114058 114758 110597 96859 123098 95561 90640 126500 TRUE FALSE 127967.5489 110133.1704 117860.6368 105381.9043 106254.4061 100545.0371 106935.0847 108051.1508 98523.70336 122372.3154 1.045723034 0.899984364 0.963131542 0.861158049 0.868287944 0.82163222 0.873850302 0.882970552 0.805114319 1 16.90091768 -1.522878977 0.727130957 0.867704954 26.55769493 0.431456052 0.055309202 286.3219978 1.359949932 0.019810995 12010.41467 0.029999984 1.522878977 25.68998997 RS(ph)PPPSLAK ddPTM_A459_MK2206_30min_R2 1 RSPPPSLAK 9 1 F8VNV8;P54284-5;P54284-2;P54284-3;P54284-4;P54284 F8VNV8 CACNB3 Voltage-dependent L-type calcium channel subunit beta-3 1 RS(1)PPPSLAK 87.719 0.016504 2269600 15013 17357 17937 20359 17505 16142 19205 14868 15973 15311 TRUE FALSE 16162.40682 16495.07662 18535.01063 18695.60457 16817.66574 16756.29512 16683.36043 16811.29865 17362.30267 14811.40332 1.09121374 1.113674124 1.251401385 1.262243973 1.135453905 1.131310434 1.126386208 1.135024027 1.172225365 1 13.85442072 -6.498747614 24.61453204 1.123500687 1.182398318 0.1818005 0.064809732 1254.212812 1279339.088 0.021006119 0.023686634 3.17E-07 6.498747614 0.058897631 RS(ph)PSAPAATSSASSSTSSYK ddPTM_A459_MK2206_30min_R1 1 RSPSAPAATSSASSSTSSYK 20 1 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 RS(0.636)PS(0.361)APAAT(0.002)S(0.001)SASSSTSSYK 54.15 0.024903 8237400 872.88 917.84 850.11 814.29 907.52 962.78 939.57 959.72 543 672.9 TRUE FALSE 798.6369723 858.0884492 792.4069017 877.0067569 871.3715567 1017.291772 876.8929996 951.3292692 599.4467931 756.2639321 1.056029434 1.134641509 1.047791476 1.159656992 1.152205625 1.345154421 1.159506572 1.257932884 0.792642314 1 9.562746005 -8.260100044 24.99999276 0.896321148 1.164590446 0.562222177 0.094521318 85.27419835 1591809.633 0.074204882 0.024509679 5.49E-09 8.260100044 0.268269298 RS(ph)PSAPVCK ddPTM_A459_MK2206_30min_R2 1 RSPSAPVCK 9 1 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 RS(0.854)PS(0.146)APVCK 76.332 0.029167 8645100 76076 102260 95854 108710 88879 92910 94729 76742 84887 82926 TRUE FALSE 81900.43705 97181.9171 99049.72452 99828.04525 85389.16388 96445.75516 82290.96851 86772.44289 92270.31782 80220.13141 1.020946184 1.211440512 1.234724037 1.244426349 1.064435602 1.202263739 1.025814432 1.081679142 1.150213995 1 16.29167671 -7.257505544 24.98247246 1.071233487 1.167715263 0.280093645 0.0769235 482.5405672 3064466.426 0.030417778 0.022662069 5.53E-08 7.257505544 0.096481776 RS(ph)PSPAPPPR ddPTM_A459_MK2206_30min_R2 1 RSPSPAPPPR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RS(0.972)PS(0.028)PAPPPR 65.627 0.045253 3444300 3061.5 3864.1 3619.8 4750.4 4767.2 6096.1 5192.6 5049.8 4988.1 4973.8 TRUE FALSE 3295.890794 3672.214413 3740.482325 4362.277124 4580.015775 6328.091357 4510.805383 5709.826199 5421.955922 4811.505313 0.685002006 0.763215288 0.777403761 0.906634585 0.951888334 1.31519991 0.93750398 1.186702669 1.126873103 1 12.23227261 -6.104072332 1.487332821 1.112693405 0.729619755 0.700841583 0.103468661 0.211972396 0.9418545 0.035585551 0.056354393 7.87E-07 6.104072332 -0.383073649 RS(ph)PSPYYSR ddPTM_A459_MK2206_30min_R2 1 RSPSPYYSR 9 1 Q13595;Q13595-4;Q13595-3;P62995;H7C2L4;P62995-3;H7BXF3 Q13595;P62995 TRA2A;TRA2B Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta 1 RS(0.737)PS(0.263)PYYSR 64.64 0.046509 5143800 16039 12044 10577 12453 12160 9815.2 13444 9597 12169 12644 TRUE FALSE 17266.95817 11445.91247 10929.6319 11435.55006 11682.5373 10188.72431 11678.78665 10851.36085 13227.43762 12231.42732 1.411687919 0.935778972 0.893569623 0.934931776 0.955124615 0.832995533 0.954817974 0.887170448 1.081430424 1 13.57830514 -4.761456692 10.09950135 0.933822907 1.413548901 0.828496339 0.064051635 0.026015963 59.41828643 0.015090098 0.085265991 1.73E-05 4.761456692 0.479725994 RS(ph)PTDSDVSLDSEDSGAK ddPTM_A459_MK2206_30min_R1 1 RSPTDSDVSLDSEDSGAK 18 1 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 RS(0.772)PT(0.224)DS(0.004)DVSLDSEDSGAK 108.28 0.00078578 9547600 4584.2 4421.3 3823.8 4183.1 5929.4 4756.3 5117.3 4083.8 4091.4 3336.5 TRUE FALSE 4194.289717 4133.472566 3564.25111 4505.283087 5693.219442 5025.597596 4775.934254 4048.095767 4516.715671 3749.850809 1.118521757 1.102303205 0.950504778 1.201456622 1.518252254 1.340212678 1.273633138 1.079535153 1.204505433 1 11.87261748 -5.963175169 10.82646879 1.25731155 1.063779607 0.242202784 0.1389764 0.749270256 215.6550424 0.041063902 0.060861949 1.09E-06 5.963175169 -0.193531944 RS(ph)PTEDFR ddPTM_A459_MK2206_30min_R1 2 RSPTEDFR 8 1 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 RS(0.998)PT(0.002)EDFR;RS(0.91)PT(0.09)EDFR 125.74 0.0090037 67416000 9342.7 9678.9 9127.2 6341.3 8389 8704.8 10687.6 7067.5 9908.2 10034.5 TRUE FALSE 8548.054305 9048.801851 8507.671094 6829.708025 8054.848366 9197.658253 9974.649705 7005.709593 10938.19285 11277.64962 0.757964168 0.802365932 0.75438335 0.605596756 0.714231124 0.815565172 0.884461749 0.621202984 0.969900043 1 13.46117881 -8.364897691 6.774241408 0.995150873 0.74841432 0.59100172 0.080046131 0.189174239 10.44333676 0.079742979 0.020663624 4.32E-09 8.364897691 -0.246736553 RS(ph)PTEDFR ddPTM_A459_MK2206_30min_R2 3 RSPTEDFR 8 1 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 RS(0.997)PT(0.003)EDFR;RS(0.987)PT(0.013)EDFR;RS(0.899)PT(0.101)EDFR 107.55 0.013633 110206000 219854 199575 177948 219096 185420 177258 212306 196941 141053 179915 TRUE FALSE 236686.1913 189664.3957 183880.6975 201195.1559 178139.4791 184003.6774 184429.9672 222681.8649 153321.535 174044.3883 1.359918545 1.089747263 1.056516095 1.155999098 1.023529003 1.057222696 1.059672012 1.279454437 0.880933516 1 17.40909577 -4.761699927 5.483556558 1.075386425 1.373858215 0.446324632 0.097601333 0.137702201 13.05780202 0.022684732 0.156351849 1.73E-05 4.761699927 0.29847179 RS(ph)PTSSAIPLQS(ph)PR ddPTM_A459_MK2206_30min_R2 1 RSPTSSAIPLQSPR 14 1 Q9ULD2;Q9ULD2-4;Q9ULD2-7;Q9ULD2-3;Q9ULD2-6;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 2 RS(0.996)PT(0.003)S(0.001)SAIPLQS(1)PR 98.443 0.025448 6662600 22961 27201 25761 34336 19472 21314 26981 21502 18347 27488 TRUE FALSE 24718.91181 25850.23789 26619.85888 31530.63896 18707.43144 22125.11921 23438.36229 24312.38523 19942.7889 26591.06881 0.929594519 0.972139859 1.001082697 1.185760497 0.70352311 0.832050767 0.88143739 0.914306431 0.749980719 1 14.69865415 -6.26722625 24.99960011 0.843584498 1.017068233 0.429255255 0.098891348 473.3818743 2045033.473 0.030289096 0.03525763 5.40E-07 6.26722625 0.173483735 RS(ph)PTSSAIPLQSPR ddPTM_A459_MK2206_30min_R1 2 RSPTSSAIPLQSPR 14 1 Q9ULD2;Q9ULD2-4;Q9ULD2-7;Q9ULD2-3;Q9ULD2-6;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RS(0.648)PT(0.154)S(0.154)S(0.044)AIPLQSPR;RS(0.952)PT(0.022)S(0.007)S(0.014)AIPLQS(0.005)PR 123.72 0.0028497 22799700 2411.1 2072.26 2314.9 1839.97 2077.05 2002.17 2635.9 2019.25 2215.13 1867.36 TRUE FALSE 2206.023284 1937.355497 2157.771038 1981.684808 1994.3167 2115.531135 2460.06392 2001.59591 2445.40069 2098.702655 1.051136653 0.923120525 1.028145189 0.94424277 0.950261675 1.008018516 1.172183165 0.953730108 1.165196358 1 11.03528206 -7.01313591 24.15049538 1.071947198 0.977225443 0.277882195 0.071198501 496.4512437 912730.0149 0.024283606 0.019734876 9.70E-08 7.01313591 -0.094721755 RS(ph)PTSSAIPLQSPR ddPTM_A459_MK2206_30min_R2 2 RSPTSSAIPLQSPR 14 1 Q9ULD2;Q9ULD2-4;Q9ULD2-7;Q9ULD2-3;Q9ULD2-6;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RS(0.486)PT(0.486)S(0.014)S(0.014)AIPLQSPR;RS(0.837)PT(0.116)S(0.036)S(0.011)AIPLQS(0.001)PR 132.23 0.0014817 174897000 32531 53749 35213 43526 41335 41361 49998 41358 37811 40045 TRUE FALSE 35021.59837 51079.90282 36386.98385 39969.78657 39711.98021 42935.02184 43433.20254 46763.6326 41099.73243 38738.33493 0.904055335 1.31858798 0.9393017 1.031788967 1.025133896 1.10833421 1.121194357 1.20716682 1.060957641 1 15.24147432 -6.841911095 7.390567923 1.114369458 1.052677111 0.045676211 0.114654469 0.733297364 57.15463982 0.039087475 0.034530341 1.44E-07 6.841911095 -0.061692347 RS(ph)PTSSPTPQR ddPTM_A459_MK2206_30min_R1 1 RSPTSSPTPQR 11 1 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 1 RS(0.808)PT(0.149)S(0.029)S(0.01)PT(0.004)PQR 74.133 0.028623 1269900 308.33 339.72 474.03 325.65 336.58 300.08 365.6 304.02 249.37 266.31 TRUE FALSE 282.1049144 317.6041663 441.8541643 350.7316194 323.1733059 317.0702703 341.2114911 301.3619852 275.2929039 299.3024933 0.942541144 1.061147746 1.476279597 1.171829929 1.079754807 1.059363946 1.140022214 1.006880971 0.919781525 1 8.225460487 -7.606353171 1.023151332 0.955735644 1.158344252 0.218603148 0.132840417 0.868083961 1.662232556 0.119683311 0.052868872 2.48E-08 7.606353171 0.202608608 RS(ph)PTVEPSTLPR ddPTM_A459_MK2206_30min_R1 2 RSPTVEPSTLPR 12 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 RS(0.99)PT(0.01)VEPSTLPR;RS(0.997)PT(0.003)VEPSTLPR 104.59 0.0049684 10983300 3040.3 2524.2 2680.4 2265 2651.4 2424.6 2599.5 2566.9 1905.04 2159.8 TRUE FALSE 2781.70652 2359.874121 2498.461916 2439.450692 2545.789124 2561.878757 2426.092098 2544.457864 2103.075725 2427.37233 1.145974388 0.97219289 1.029286643 1.0049759 1.048783943 1.055412359 0.999472585 1.048235507 0.86640014 1 11.2451797 -8.241252694 24.91474502 0.93320006 1.034104237 0.382323725 0.053115585 664.5838146 820243.4397 0.033232567 0.012526023 5.74E-09 8.241252694 0.100904177 RS(ph)PTVEPSTLPR ddPTM_A459_MK2206_30min_R2 2 RSPTVEPSTLPR 12 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 RS(1)PTVEPSTLPR;RS(1)PTVEPSTLPR 129.17 0.001205 36644000 55985 60319 55195 77097 65152 72179 74965 67869 68362 57763 TRUE FALSE 60271.25465 57323.64617 57035.17375 70797.92848 62593.80512 74925.82242 65122.00545 76739.71133 74308.00319 55878.19804 1.078618437 1.025867837 1.020705315 1.267004502 1.120182957 1.34087757 1.165427801 1.373339049 1.329821036 1 15.76999788 -5.760346322 24.99999901 1.241241101 1.040144222 0.380935625 0.107958058 27.15094356 620952.4093 0.028674092 0.046296614 1.74E-06 5.760346322 -0.201096878 RS(ph)PVPAQIAITVPK ddPTM_A459_MK2206_30min_R1 2 RSPVPAQIAITVPK 14 1 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK 93.381 0.0074487 103804000 17044.2 17290.7 17546.7 14542.2 17027.8 15949.3 16259 15688.7 14873 13267.9 TRUE FALSE 15594.50129 16165.07229 16355.67889 15662.24276 16349.54667 16852.33558 15174.39178 15551.53535 16419.10157 14911.62762 1.04579471 1.084058206 1.096840621 1.050337573 1.096429383 1.130147293 1.017621427 1.042913339 1.101093857 1 13.86415012 -13.9759686 0.292030793 0.593646319 1.078277927 0.310595248 0.032615149 224.6956097 2.860332184 55.06535473 0.035341047 1.06E-14 13.9759686 0.484631609 RS(ph)PVPAQIAITVPK ddPTM_A459_MK2206_30min_R2 2 RSPVPAQIAITVPK 14 1 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK 169.06 9.48E-05 207500000 604290 664810 600300 686500 622420 602060 732820 574290 578950 645960 TRUE FALSE 650554.907 631796.5021 620313.7024 630410.754 597980.6634 624971.8152 636599.8537 649351.6748 629306.0245 624882.3781 1.041083778 1.011064681 0.992688743 1.008847066 0.956949155 1.000143126 1.01875149 1.039158244 1.007079166 1 19.25322513 -7.265568046 8.264246665 1.019536964 1.000074983 0.085396822 0.021716671 0.259376126 200.2953295 0.009137466 0.006528596 5.43E-08 7.265568046 -0.019461981 RS(ph)PVSPQLQQQHQAAAAAFLQQR ddPTM_A459_MK2206_30min_R2 1 RSPVSPQLQQQHQAAAAAFLQQR 23 1 A0A5K1VW61;A0A5K1VW79;A0A5K1VW71;A0A5K1VW93;Q7Z5Q1-7;Q7Z5Q1-5;Q7Z5Q1-4;Q7Z5Q1-6;Q7Z5Q1-3;Q7Z5Q1;Q7Z5Q1-8;Q7Z5Q1-9 A0A5K1VW61 CPEB2 Cytoplasmic polyadenylation element-binding protein 2 1 RS(0.5)PVS(0.5)PQLQQQHQAAAAAFLQQR 105.91 1.07E-05 4397100 5662.4 6927.3 6692 7030.3 6759.9 6823.8 7385.7 5253.5 7420.3 5943.1 TRUE FALSE 6095.917698 6583.300355 6915.10794 6455.902001 6494.47236 7083.484491 6415.948718 5940.150488 8065.704281 5749.177134 1.060311338 1.145085671 1.202799597 1.122926264 1.129635113 1.232086667 1.115976873 1.033217511 1.402931949 1 12.48913977 -4.772979271 4.698310943 1.156524089 1.054062169 0.066220413 0.105727106 0.51282399 26.6136361 0.024586572 0.172648669 1.69E-05 4.772979271 -0.10246192 RS(ph)S(ph)DT(ph)S(ph)GSPAT(ph)PLK ddPTM_A459_MK2206_30min_R1 1 RSSDTSGSPATPLK 14 1 Q7Z5R6 Q7Z5R6 APBB1IP Amyloid beta A4 precursor protein-binding family B member 1-interacting protein 5 RS(0.996)S(0.999)DT(0.898)S(0.561)GS(0.561)PAT(0.984)PLK 50.108 0.046568 0 354.36 345.84 391.47 469.03 572.7 457.02 298.06 443.3 352.29 316.33 TRUE FALSE 324.2198212 323.3257531 364.8981071 505.1547719 549.8881463 482.8960775 278.1769612 439.4242748 388.9118062 355.5193486 0.911961114 0.909446292 1.026380445 1.420892488 1.546717917 1.358283535 0.782452382 1.236006638 1.093925852 1 8.473784268 -5.548632518 10.70258257 1.218785899 0.924890326 0.255713925 0.205522365 0.628089701 256.2267208 0.060630938 0.105629675 2.83E-06 5.548632518 -0.293895573 RS(ph)SAIGIENIQEVQEK ddPTM_A459_MK2206_30min_R2 1 RSSAIGIENIQEVQEK 16 1 P47736-4;F2Z357;J3KPC5;P47736;P47736-3;A0A0A0MQY8;X6R8W7;P47736-2 P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 RS(0.864)S(0.136)AIGIENIQEVQEK 86.262 0.028113 6000300 21192 31050 25878 32115 22636 29356 25423 21925 28248 21815 TRUE FALSE 22814.47581 29508.10215 26740.7596 29491.10177 21747.1969 30473.16315 22084.92956 24790.67278 30704.95998 21103.17834 1.081091931 1.398277628 1.267143706 1.397472044 1.03051761 1.444008228 1.046521486 1.174736449 1.454992205 1 14.36517268 -6.221973289 24.99108491 1.205879408 1.292669745 0.065180074 0.169061761 1727.400621 1093840.291 0.047456086 0.061264646 6.00E-07 6.221973289 0.086790337 RS(ph)SDEDAAGEPK ddPTM_A459_MK2206_30min_R1 1 RSSDEDAAGEPK 12 1 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 RS(0.995)S(0.005)DEDAAGEPK 166.64 0.00082946 2625800 1593.7 1453.4 1343.6 1602.3 1201.8 905.18 1481.2 1443.1 329.96 987.53 TRUE FALSE 1458.147446 1358.783396 1252.400175 1725.709424 1153.929761 956.4305094 1382.391851 1430.483129 364.2605228 1109.872672 1.313797054 1.224269621 1.128417887 1.554871534 1.039695625 0.861747959 1.24554094 1.288871386 0.328200281 1 10.11617846 -8.243914954 24.76446363 0.664100097 1.200872673 0.475441899 0.228088672 530.1231716 749141.3461 0.152310394 0.057269302 5.70E-09 8.243914954 0.536772577 RS(ph)SDEDAAGEPK ddPTM_A459_MK2206_30min_R2 1 RSSDEDAAGEPK 12 1 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 RS(0.987)S(0.013)DEDAAGEPK 115.26 0.009518 3930100 21832 16038 18735 18282 21661 14608 19826 60030 38800 21951 TRUE FALSE 23503.47471 15241.57624 19359.61555 16788.30212 20810.4803 15163.91768 17222.82238 67876.12711 42174.75387 21234.74067 1.106840676 0.717766065 0.911695408 0.79060547 0.980020459 0.714108918 0.811068176 3.196466026 1.986120505 1 14.37413887 -7.730140334 24.99881219 2.193470079 0.854249822 0.532873823 0.50994801 119.6495044 95565.11571 0.222552195 0.128474682 1.86E-08 7.730140334 -1.339220258 RS(ph)SDGSLSHEEDLAK ddPTM_A459_MK2206_30min_R1 2 RSSDGSLSHEEDLAK 15 1 A0A2R8Y7R9;Q13136-2;Q13136;H0YEF9;E9PJZ7 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 RS(0.627)S(0.371)DGS(0.002)LSHEEDLAK;RS(0.586)S(0.413)DGS(0.001)LSHEEDLAK 115.83 0.0011955 24356300 6626.4 5121.4 5528.9 4713.8 5717.1 5356.1 5989.5 6184.9 4227.7 3749 TRUE FALSE 6062.789883 4787.995929 5153.613672 5076.857693 5489.375801 5659.357753 5589.951383 6130.826071 4667.184544 4213.454424 1.438911941 1.13635878 1.223132649 1.204915773 1.302820738 1.343163396 1.326690839 1.455059306 1.107686016 1 12.0407878 -8.488440229 6.978649812 1.000108893 1.294015184 0.543097303 0.093992913 0.141731443 22.04856757 0.09311198 0.02409207 3.25E-09 8.488440229 0.293906291 RS(ph)SDPALIGLSTSVSDSNFSSEEPSR ddPTM_A459_MK2206_30min_R1 4 RSSDPALIGLSTSVSDSNFSSEEPSR 26 1 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR 233.5 1.25E-40 517069000 20172.8 21676.2 19736.4 18555.2 23648.8 20376.9 22222.7 19753.4 18711.6 17085.9 TRUE FALSE 18456.99743 20265.07544 18396.74816 19984.32472 22706.81822 21530.62247 20740.26423 19580.69811 20656.73778 19202.63028 0.961170275 1.055328106 0.958032722 1.040707675 1.182484789 1.121232985 1.080074132 1.019688335 1.075724392 1 14.22901632 -6.000899071 24.98187293 1.085536446 0.998138467 0.34884366 0.053570111 38.39955123 1067064.13 0.015554991 0.022757159 9.98E-07 6.000899071 -0.087397979 RS(ph)SDPALIGLSTSVSDSNFSSEEPSR ddPTM_A459_MK2206_30min_R2 5 RSSDPALIGLSTSVSDSNFSSEEPSR 26 1 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR 180.21 7.28E-22 252837500 153873.4 195433.3 172694.9 217908 230933.9 208922.5 225599 144515.6 201628.1 189906.4 TRUE FALSE 165654.0658 185728.3665 178452.4618 200104.2193 221866.2747 216873.1921 195977.5803 163404.2851 219165.3477 183709.7697 0.901716148 1.010987966 0.971382535 1.089241033 1.207699923 1.180520734 1.066778215 0.889469762 1.192997781 1 17.48706883 -5.757834405 6.170199187 1.093010461 0.965371388 0.281769601 0.093655199 0.212658046 31.72024902 0.027362638 0.044624854 1.75E-06 5.757834405 -0.127639072 RS(ph)SDPLGDTASNLGSAVDELMR ddPTM_A459_MK2206_30min_R1 1 RSSDPLGDTASNLGSAVDELMR 22 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 RS(0.617)S(0.383)DPLGDTASNLGSAVDELMR 96.633 0.00010069 2470000 394.26 323.53 372.19 255.94 369.63 243.27 207.31 268.16 231.21 179.3 TRUE FALSE 360.7261167 302.4681382 346.9267798 275.6525431 354.9068544 257.0437372 193.4807282 265.8155054 255.2451069 201.5130376 1.790088229 1.500985453 1.721609598 1.367914187 1.761210384 1.275568768 0.960140001 1.3190983 1.266643141 1 7.654729372 -6.903418207 5.442145125 1.157161531 1.61009667 0.694607328 0.155370369 0.122666126 5.637507903 0.053372394 0.046952797 1.25E-07 6.903418207 0.452935139 RS(ph)SDSWEVWGSASTNR ddPTM_A459_MK2206_30min_R1 1 RSSDSWEVWGSASTNR 16 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 RS(0.674)S(0.325)DS(0.001)WEVWGSASTNR 152.9 0.00028464 12861000 3136.3 2684.5 2950.1 2283.5 2735.3 2300.5 2130 2197.4 1758.1 2039.2 TRUE FALSE 2869.541216 2509.738562 2749.855431 2459.375566 2626.347209 2430.752322 1987.911586 2178.188363 1940.860786 2291.831491 1.252073386 1.095079883 1.199850618 1.073104884 1.145959997 1.060615639 0.867389943 0.950413838 0.846860161 1 11.16228526 -7.051416659 3.101819096 0.912208217 1.147650864 0.764349393 0.061823999 0.118660418 2.270424539 0.023587175 0.018483021 8.88E-08 7.051416659 0.235442647 RS(ph)SDSWEVWGSASTNR ddPTM_A459_MK2206_30min_R2 2 RSSDSWEVWGSASTNR 16 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 RS(0.497)S(0.497)DS(0.006)WEVWGSASTNR;RS(0.499)S(0.499)DS(0.002)WEVWGSASTNR 109.22 0.0015442 14167500 35387 44662 42480 46335 35769 35261 37240 36510 37200 34297 TRUE FALSE 38096.25593 42444.15002 43896.262 42549.28228 34364.52934 36602.88206 32350.34327 41281.98236 40435.58876 33177.8917 1.148242217 1.279290149 1.323057607 1.282458894 1.035765914 1.103231103 0.975057233 1.244261773 1.218751002 1 15.01793459 -6.250456698 24.66377815 1.102687559 1.264392466 0.432181477 0.090723669 633.9271463 1423606.943 0.028088434 0.035893737 5.62E-07 6.250456698 0.161704907 RS(ph)SGENVENNSQR ddPTM_A459_MK2206_30min_R2 1 RSSGENVENNSQR 13 1 Q9NVW2-2;Q9NVW2 Q9NVW2-2 RLIM E3 ubiquitin-protein ligase RLIM 1 RS(0.5)S(0.5)GENVENNSQR 137.21 0.0018913 1470600 5144.1 4365.4 6841.9 7004.8 6432.2 5185.8 5090.9 5620.8 6702.7 6512.3 TRUE FALSE 5537.936251 4148.620584 7070.005531 6432.485433 6179.639509 5383.149253 4422.458715 6355.457859 7285.68873 6299.804184 0.879064823 0.658531672 1.122257982 1.02106117 0.980925649 0.854494695 0.701999393 1.008834191 1.156494475 1 12.62109127 -5.253645641 24.98500978 0.968054207 0.768798256 0.289860991 0.131508892 833.5819355 2672264.47 0.035913214 0.09129212 5.58E-06 5.253645641 -0.199255951 RS(ph)SGFISELPSEEGK ddPTM_A459_MK2206_30min_R2 1 RSSGFISELPSEEGK 15 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 RS(0.5)S(0.5)GFIS(0.001)ELPSEEGK 103.66 0.0028285 19379000 121470 163760 148600 159190 157450 130190 161930 120640 135780 130870 TRUE FALSE 130769.8366 155627.9165 153554.2498 146183.6678 151267.7219 135144.4717 140668.3965 136408.0622 147589.899 126599.7226 1.032939361 1.229291134 1.212911424 1.154691849 1.194850342 1.067494216 1.111127209 1.077475206 1.165799545 1 16.94991472 -6.761806902 24.99999972 1.090893179 1.170608156 0.283621228 0.063274386 13.20205045 898019.7946 0.020847686 0.019517918 1.73E-07 6.761806902 0.079714976 RS(ph)SGYTPR ddPTM_A459_MK2206_30min_R2 1 RSSGYTPR 8 1 F8W824 F8W824 KCNQ1 1 RS(0.999)S(0.001)GYTPR 71.877 0.034634 12849000 7961.1 6969.1 6163.6 5456 7483 6560 8835.8 5739.1 9972.7 7007.3 TRUE FALSE 8570.607937 6623.024628 6369.091348 5010.227347 7189.179821 6809.645397 7675.648846 6489.220075 10840.10742 6778.652375 1.264352774 0.977041492 0.93958076 0.739118496 1.060561808 1.004572151 1.132326666 0.957302383 1.599153758 1 12.72678277 -8.217001885 24.99885887 1.299577935 1.002592315 0.280757433 0.185553112 465.2391407 261726.5937 0.120184345 0.04542505 6.07E-09 8.217001885 -0.29698562 RS(ph)SIGLR ddPTM_A459_MK2206_30min_R2 1 RSSIGLR 7 1 Q96GN5-5;Q96GN5-2;Q96GN5;C9J8L0;C9IZR6;Q96GN5-4 Q96GN5-5 CDCA7L Cell division cycle-associated 7-like protein 1 RS(0.5)S(0.5)IGLR 90.601 0.015112 2374700 4908.1 4684.9 6478.9 5957.2 5123.9 5120.8 4963 6480.8 6195.4 6563.6 TRUE FALSE 5283.86791 4452.254678 6694.903292 5470.477704 4922.70994 5315.675632 4311.352138 7327.862812 6734.264693 6349.43027 0.832179847 0.701205382 1.054410082 0.861569853 0.775299473 0.837189387 0.679014015 1.154097691 1.060609284 1 12.63241143 -7.771577936 24.99998816 1.08051516 0.825087621 0.556288827 0.102748774 159.1072579 392325.4787 0.055943847 0.027358738 1.69E-08 7.771577936 -0.255427539 RS(ph)SITEPEGPNGPNIQK ddPTM_A459_MK2206_30min_R2 2 RSSITEPEGPNGPNIQK 17 1 Q13625-2;Q13625;Q13625-3 Q13625-2 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 RS(0.491)S(0.491)IT(0.018)EPEGPNGPNIQK;RS(0.435)S(0.435)IT(0.13)EPEGPNGPNIQK 165.89 8.01E-07 64786000 111304 177701 170680 190142 194276 167328 192035 119501 207020 174259 TRUE FALSE 119825.5198 168876.6267 176370.386 174606.7904 186647.7481 173695.7843 166820.5738 135120.191 225026.2254 168572.9431 0.710822968 1.001801497 1.046255602 1.035793688 1.107222456 1.030389463 0.989604682 0.801553254 1.334889344 1 17.36301347 -4.759492301 4.028820828 1.035323855 0.674609353 0.38967907 0.123712789 0.256899511 7.835342518 0.029482623 0.279880092 1.74E-05 4.759492301 -0.360714502 RS(ph)SLLNAK ddPTM_A459_MK2206_30min_R2 2 RSSLLNAK 8 1 E9PCH4;Q8TEU7;A0A5F9ZHG7;Q8TEU7-4;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RE77 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 RS(0.952)S(0.048)LLNAK;RS(0.682)S(0.318)LLNAK 95.483 0.011218 52514000 273250 354730 287500 319980 339170 279620 337000 247760 310760 285190 TRUE FALSE 294170.2301 337114.624 297085.1065 293836.6104 325852.4816 290261.135 292751.4952 280143.0827 337789.3431 275884.2737 1.066281257 1.221942156 1.076846834 1.065071983 1.181120175 1.052111928 1.061138757 1.01543694 1.224387815 1 18.07370369 -6.798265653 24.9997037 1.070987614 1.122091717 0.109909174 0.073469501 410.2182956 278476.2809 0.025049162 0.022091854 1.59E-07 6.798265653 0.051104103 RS(ph)SLPLDHGSPAQENPESEK ddPTM_A459_MK2206_30min_R2 2 RSSLPLDHGSPAQENPESEK 20 1 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5;A0A0A0MRX3 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 RS(0.499)S(0.499)LPLDHGS(0.001)PAQENPESEK;RS(0.381)S(0.255)LPLDHGS(0.365)PAQENPESEK 86.761 0.0015286 14327100 22615 44393 33874 70290 57442 76009 54224 36390 57933 34320 TRUE FALSE 24346.42179 42188.50817 35003.34225 64547.08215 55186.53846 78901.57576 47104.32367 41146.29795 62971.90762 33200.14121 0.733322838 1.270732793 1.054313053 1.944180952 1.662238064 2.376543378 1.418798895 1.239341052 1.896736138 1 15.01890176 -5.745099917 24.57638352 1.6796015 1.044583418 0.357735659 0.38405809 218.278512 328311.9644 0.103764911 0.179001951 1.80E-06 5.745099917 -0.635018082 RS(ph)SPAAFINPPIGTVTPALK ddPTM_A459_MK2206_30min_R1 1 RSSPAAFINPPIGTVTPALK 20 1 F6VRR5;Q9BY77-2;Q9BY77;Q6R954;F8WEE2;Q8WUT1;F8WCX5 F6VRR5 POLDIP3;PDIP46 Polymerase delta-interacting protein 3 1 RS(0.5)S(0.5)PAAFINPPIGTVTPALK 174.25 2.25E-10 26661000 6912.9 6358.7 6975.9 6327.3 7270.6 6143 6050.3 5957.3 5079.4 4246.2 TRUE FALSE 6324.921554 5944.747474 6502.395344 6814.629742 6980.996606 6490.811351 5646.695526 5905.215954 5607.421807 4772.251313 1.32535383 1.245690364 1.362542523 1.427969588 1.462830884 1.360115159 1.183235156 1.237406743 1.175005556 1 12.2204543 -8.220194801 0.796169212 1.01299082 1.362928356 0.730949421 0.06809616 0.353540091 0.480727441 0.073993061 0.028988938 6.02E-09 8.220194801 0.349937537 RS(ph)SPAAFINPPIGTVTPALK ddPTM_A459_MK2206_30min_R2 2 RSSPAAFINPPIGTVTPALK 20 1 F6VRR5;Q9BY77-2;Q9BY77;Q6R954;F8WEE2;Q8WUT1;F8WCX5 F6VRR5 POLDIP3;PDIP46 Polymerase delta-interacting protein 3 1 RS(0.5)S(0.5)PAAFINPPIGTVTPALK;RS(0.5)S(0.5)PAAFINPPIGTVTPALK 129.52 9.13E-05 42539000 143324 206170 172502 211878 214267 203563 233815 178367 185481 167698 TRUE FALSE 154296.9956 195931.8976 178253.1306 194566.8896 205853.801 211309.7326 203114.8096 201680.1793 201613.8021 162226.028 0.95112355 1.207771034 1.09879489 1.199356799 1.268932017 1.302563684 1.25204822 1.243204816 1.242795651 1 17.30764578 -3.894774436 0.939489321 1.227844675 3.12E-11 0.397344222 0.087991422 8.682852376 1.769722468 0.027686816 16.14860395 0.000127416 3.894774436 -1.227844675 RS(ph)SPDDGNDVSPYSLSPVSNK ddPTM_A459_MK2206_30min_R2 1 RSSPDDGNDVSPYSLSPVSNK 21 1 K7EQT1;Q9UM11-2;Q9UM11 K7EQT1 FZR1 Fizzy-related protein homolog 1 RS(0.605)S(0.395)PDDGNDVSPYSLSPVSNK 99.859 0.0010522 0 9620.4 17615 17082 17038 17195 14599 18212 12664 13149 13415 TRUE FALSE 10356.94522 16740.26471 17651.50535 15645.9409 16519.8379 15154.57518 15820.74252 14319.22828 14292.67625 12977.26965 0.798083534 1.289968165 1.360186374 1.205641966 1.272982557 1.167778399 1.219111797 1.103408396 1.101362354 1 13.66369926 -8.288685689 1.187065988 1.006732174 1.202724699 0.134786931 0.143478252 0.83645061 2.389783643 0.134180463 0.043443415 5.14E-09 8.288685689 0.195992525 RS(ph)SPPGHYYQK ddPTM_A459_MK2206_30min_R1 5 RSSPPGHYYQK 11 1 D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;D6RDK6;D6RBN5;Q9NX40-3;Q9NX40-2;Q9NX40-4;Q9NX40 D6RI08 OCIAD1 OCIA domain-containing protein 1 1 RS(0.5)S(0.5)PPGHYYQK;RS(0.5)S(0.5)PPGHYYQK;RS(0.5)S(0.5)PPGHYYQK;RS(0.92)S(0.079)PPGHYYQK;RS(0.5)S(0.5)PPGHYYQK 106.26 0.0077145 51364700 20395.2 17475.5 17886.8 16040.6 24125.8 20353.3 23657.7 20919.5 16302.7 16042.2 TRUE FALSE 18660.48114 16337.84177 16672.69385 17276.04979 23164.8183 21505.68626 22079.538 20736.60302 17997.424 18029.62885 1.034989755 0.906166284 0.924738606 0.958203296 1.284819477 1.192796948 1.224625209 1.150140316 0.998213782 1 14.13808208 -6.185879556 9.499477569 1.155877871 0.949700637 0.49909091 0.090418603 0.370594131 44.67119284 0.026852246 0.034693791 6.52E-07 6.185879556 -0.206177234 RS(ph)SPPGHYYQK ddPTM_A459_MK2206_30min_R2 2 RSSPPGHYYQK 11 1 D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;D6RDK6;D6RBN5;Q9NX40-3;Q9NX40-2;Q9NX40-4;Q9NX40 D6RI08 OCIAD1 OCIA domain-containing protein 1 1 RS(0.5)S(0.5)PPGHYYQK;RS(0.764)S(0.236)PPGHYYQK 75.509 0.036435 62969000 79258 93693 85645 108375 113213 115561 124478 94227 110842 97481 TRUE FALSE 85326.05342 89040.34186 88500.36155 99520.41583 108767.6888 119958.7548 108133.8891 106542.7924 120482.8368 94300.20295 0.90483425 0.944222166 0.938495982 1.055357387 1.153419456 1.272094344 1.146698371 1.129825696 1.277651935 1 16.52497326 -5.990465836 2.155863609 1.175435059 0.925732317 0.667642772 0.073915508 0.173370356 1.619684137 0.022458868 0.035379374 1.02E-06 5.990465836 -0.249702742 RS(ph)SPPPPPSGSSSR ddPTM_A459_MK2206_30min_R1 1 RSSPPPPPSGSSSR 14 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RS(0.627)S(0.371)PPPPPSGS(0.001)S(0.001)SR 95.183 0.022764 1623400 675.18 680.92 690.03 601.63 796.02 648.1 607.78 671.25 743.78 579.66 TRUE FALSE 617.7523955 636.5919842 643.1926861 647.9676468 764.3128378 684.7948619 567.2361052 665.381332 821.0985926 651.472657 0.948239944 0.977158408 0.987290379 0.994619866 1.173207854 1.051149046 0.870698254 1.021349591 1.26037307 1 9.347560818 -6.020102996 24.52510624 1.056425367 0.974761204 0.158284683 0.097486128 1318.331716 1608329.935 0.030081591 0.039378322 9.55E-07 6.020102996 -0.081664163 RS(ph)SPPPPPSGSSSR ddPTM_A459_MK2206_30min_R2 4 RSSPPPPPSGSSSR 14 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RS(0.895)S(0.105)PPPPPSGSSSR;RS(0.885)S(0.115)PPPPPSGSSSR;RS(0.591)S(0.409)PPPPPSGSSSR;RS(0.864)S(0.136)PPPPPSGSSSR 138.05 0.00029877 60273800 13624.9 17207.5 15490.1 21142.8 18224.4 16154.3 19893.7 13969.3 15575.8 16208.9 TRUE FALSE 14668.03282 16353.00057 16006.5322 19415.36561 17508.81849 16769.06321 17281.63329 15795.13547 16930.55493 15680.00492 0.935460983 1.042920628 1.020824437 1.238224459 1.116633482 1.069455226 1.102144635 1.007342507 1.07975444 1 13.93663839 -4.772885511 1.720193816 1.087215837 0.884481271 0.308168349 0.064920269 1.195301572 3.48491841 0.018556775 0.407000599 1.69E-05 4.772885511 -0.202734567 RS(ph)SPSARPPDVPGQQPQAAK ddPTM_A459_MK2206_30min_R1 1 RSSPSARPPDVPGQQPQAAK 20 2 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RS(0.452)S(0.318)PS(0.23)ARPPDVPGQQPQAAK 83.253 0.0033728 10442000 1289.3 1132.7 1023.7 963.43 1373.6 1029.3 1309.9 1139.1 908.06 846.05 TRUE FALSE 1179.638265 1058.961024 954.2140962 1037.633546 1318.886603 1087.578076 1222.518961 1129.140969 1002.456087 950.8650614 1.240594815 1.113681706 1.003522093 1.091252153 1.387038663 1.143777514 1.285691325 1.187488125 1.054256936 1 9.89309681 -2.850503114 15.64299472 1.159287821 88.90128803 0 0.119528563 0 0 0.027746945 0 0.001410902 2.850503114 87.74200021 RS(ph)SPSARPPDVPGQQPQAAK ddPTM_A459_MK2206_30min_R2 3 RSSPSARPPDVPGQQPQAAK 20 2 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RS(0.365)S(0.365)PS(0.27)ARPPDVPGQQPQAAK;RS(0.333)S(0.333)PS(0.333)ARPPDVPGQQPQAAK;RS(0.58)S(0.355)PS(0.064)ARPPDVPGQQPQAAK 93.753 0.0013661 85414400 50157.8 59898.7 55064.5 69064.1 52249.2 56411.8 64952.5 43247.7 52287.5 53131 TRUE FALSE 53997.91973 56924.21766 56900.32295 63421.3421 50197.63388 58558.59058 56424.15873 48900.32288 56835.37224 51397.33982 1.050597559 1.107532371 1.10706747 1.233942113 0.976658209 1.139331156 1.097803095 0.95141739 1.105803772 1 15.64940607 -7.622193829 10.74937747 1.021571476 1.104479157 0.224163598 0.07050943 0.551404796 55.53686671 0.031987782 0.018447589 2.39E-08 7.622193829 0.082907681 RS(ph)SPSSSSTQPQEESR ddPTM_A459_MK2206_30min_R1 2 RSSPSSSSTQPQEESR 16 1 Q4G0A6 Q4G0A6 FAM188B Protein FAM188B 1 RS(0.773)S(0.225)PS(0.001)S(0.001)SSTQPQEESR;RS(0.5)S(0.5)PSSSSTQPQEESR 199.61 1.45E-06 3446300 493.32 575.12 628.52 535.75 723.66 629.09 814.1 700.43 355.03 450.45 TRUE FALSE 451.3605435 537.6795835 585.8578136 577.0135578 694.8350898 664.7085322 759.7928744 694.3062144 391.936639 506.2551467 0.891567318 1.06207233 1.157238237 1.13976828 1.372499804 1.31299116 1.500810173 1.371455123 0.774187959 1 8.98372086 -4.94484575 1.11114383 1.250868497 0.789318652 0.184781578 0.199028501 1.986221893 2.467978343 0.064731091 1.009041785 1.14E-05 4.94484575 -0.461549845 RS(ph)SPTQETQAPFIAK ddPTM_A459_MK2206_30min_R2 1 RSSPTQETQAPFIAK 15 1 O15231-5 O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.492)S(0.492)PT(0.015)QET(0.001)QAPFIAK 101.28 0.0036175 7801300 33085 44216 41093 55547 52340 54804 51287 39020 46185 41360 TRUE FALSE 35618.01304 42020.29774 42463.02011 51008.63241 50284.86861 56889.60462 44552.95529 44120.04798 50202.08782 40010.42659 0.890218277 1.050233685 1.06129886 1.274883493 1.256794113 1.421869484 1.113533623 1.102713761 1.254725133 1 15.28808839 -5.218196432 1.564692624 1.212909862 0.901539381 0.412983609 0.114339455 0.520327274 2.029133496 0.034380074 0.191729034 6.05E-06 5.218196432 -0.311370481 RS(ph)SPVYVGR ddPTM_A459_MK2206_30min_R2 2 RSSPVYVGR 9 1 P21980-2;P21980;A2A299;P21980-3 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 1 RS(0.861)S(0.139)PVYVGR;RS(0.842)S(0.158)PVYVGR 70.728 0.03722 10889200 9664.1 20173.5 15753.5 14648.4 18920.4 16220.8 14366.3 14116.1 15987 14766.8 TRUE FALSE 10403.99093 19171.71333 16278.71383 13451.57886 18177.49003 16838.09391 12479.98755 15961.12274 17377.52036 14284.96053 0.728317793 1.342090746 1.139570095 0.941660205 1.272491443 1.178728767 0.873645225 1.117337546 1.216490611 1 13.80220943 -4.738503919 24.85434009 1.117796145 0.728316073 0.41764089 0.138807755 1882.532438 2039920.339 0.034590964 1.91325777 1.83E-05 4.738503919 -0.389480072 RS(ph)SSSGDQSSDSLNSPT(ph)LLAL ddPTM_A459_MK2206_30min_R1 1 RSSSSGDQSSDSLNSPTLLAL 21 1 P15408;P15408-3;P15408-2 P15408 FOSL2 Fos-related antigen 2 2 RS(0.311)S(0.31)S(0.117)S(0.051)GDQS(0.035)S(0.042)DS(0.134)LNS(0.154)PT(0.846)LLAL 79.143 0.022193 5315200 1202.5 881.36 1078.8 718.53 801.92 801.74 781.27 804.92 852.43 691.39 TRUE FALSE 1100.22106 823.9833038 1005.574062 773.8713051 769.9778283 847.1338259 729.1529038 797.8826693 941.043149 777.0446129 1.415904624 1.060406687 1.294100808 0.995916183 0.990905561 1.090199728 0.938366848 1.026817066 1.211054209 1 9.601853621 -1.522879404 0.737747552 1.041047056 56.71723571 0.500225148 0.103810041 296.0677219 1.345821812 0.038470073 27349.63549 0.029999954 1.522879404 55.67618865 RS(ph)SSSGDQSSDSLNSPTLLAL ddPTM_A459_MK2206_30min_R2 1 RSSSSGDQSSDSLNSPTLLAL 21 1 P15408;P15408-3;P15408-2 P15408 FOSL2 Fos-related antigen 2 1 RS(0.469)S(0.318)S(0.102)S(0.102)GDQS(0.005)S(0.005)DSLNSPTLLAL 66.777 0.01622 3590500 9095.5 10469 7879.1 10116 7813.9 9615.4 9388.1 5421.6 8114.9 6708.6 TRUE FALSE 9791.858473 9949.124683 8141.785261 9289.490441 7507.087024 9981.320785 8155.431193 6130.221735 8820.719334 6489.698931 1.50883093 1.533064136 1.254570566 1.431420862 1.15676969 1.538025244 1.256673272 0.944608032 1.359187757 1 12.66393584 -1.522878746 0.09395475 0.79848523 2.847755647 0.445006167 0.151963119 132.0262804 0.890355209 2.405214666 34.84284455 0.03 1.522878746 2.049270417 RS(ph)STSGDTEEEEEEEVVPFSSDEQK ddPTM_A459_MK2206_30min_R2 1 RSSTSGDTEEEEEEEVVPFSSDEQK 25 1 O15231-3;O15231-2;H7BZT5;O15231-4;O15231-7;O15231;O15231-8;O15231-6;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.341)S(0.218)T(0.218)S(0.218)GDT(0.006)EEEEEEEVVPFSSDEQK 100.9 1.68E-06 4415200 15139 20572 18706 19048 19066 14444 19187 16314 14816 16840 TRUE FALSE 16298.05348 19550.42439 19329.6487 17491.71747 18317.37304 14993.67654 16667.72385 18446.29581 16104.6689 16290.51218 1.000462926 1.200111094 1.186558685 1.073736496 1.124419714 0.920393194 1.023155299 1.132333693 0.988591931 1 13.99174434 -6.673554034 24.99998768 1.021802564 1.123128154 0.340031437 0.071776689 26.66805055 7580.210813 0.024039458 0.024039451 2.12E-07 6.673554034 0.10132559 RS(ph)STSGDTEEEEEEEVVPFSSDEQKR ddPTM_A459_MK2206_30min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQKR 26 2 O15231-3;O15231-2;H7BZT5;O15231-4;O15231-7;O15231;O15231-8;O15231-6;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.247)S(0.247)T(0.247)S(0.247)GDT(0.011)EEEEEEEVVPFSSDEQKR 51.777 0.0095376 3333500 559.15 467.39 401.16 464.48 742.05 536.73 495.68 538.39 325.61 226.55 TRUE FALSE 511.5913563 436.962826 373.9303769 500.2543301 712.4925772 567.1191888 462.6140916 533.682913 359.4583247 254.6167244 2.009260615 1.716159169 1.468601003 1.964734765 2.798294491 2.227344611 1.81690379 2.096024581 1.411762427 1 7.992183375 -8.457870064 2.975534816 1.00370168 2.010465235 0.502926755 0.332169547 0.217481687 4.050902361 0.356375691 0.095528714 3.48E-09 8.457870064 1.006763555 RS(ph)STSGDTEEEEEEEVVPFSSDEQKR ddPTM_A459_MK2206_30min_R2 1 RSSTSGDTEEEEEEEVVPFSSDEQKR 26 2 O15231-3;O15231-2;H7BZT5;O15231-4;O15231-7;O15231;O15231-8;O15231-6;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.275)S(0.275)T(0.275)S(0.169)GDT(0.006)EEEEEEEVVPFSSDEQKR 111.45 6.81E-09 4753800 10972 17357 12681 14094 15092 11930 12322 10934 13305 12198 TRUE FALSE 11812.02476 16495.07662 13103.77821 12942.47512 14499.41225 12384.00451 10704.1066 12363.11134 14462.24485 11799.98026 1.001020722 1.397890188 1.110491537 1.09682176 1.228765806 1.049493663 0.907129195 1.047723053 1.225616021 1 13.52649683 -6.817154015 8.929507543 1.039869323 1.172695797 0.19811393 0.121163794 0.495336706 73.62219013 0.042422777 0.03749117 1.52E-07 6.817154015 0.132826474 RS(ph)STVAPAQPDGAESEWTDVETR ddPTM_A459_MK2206_30min_R1 2 RSSTVAPAQPDGAESEWTDVETR 23 1 Q02241;H7BYN4;A0A2U3TZL8;Q02241-2;Q02241-3 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 RS(0.633)S(0.141)T(0.227)VAPAQPDGAESEWTDVETR;RS(0.796)S(0.154)T(0.05)VAPAQPDGAESEWTDVETR 158.91 7.40E-10 20385000 2521.71 2325.17 1924.89 1940.62 2173.58 2225.34 1690.85 1587.49 1523.65 1476.95 TRUE FALSE 2307.225322 2173.80101 1794.23383 2090.086889 2087.001706 2351.336828 1578.056482 1573.610742 1682.03887 1659.925716 1.389956972 1.309577283 1.080912123 1.259144833 1.257286206 1.416531357 0.950678977 0.948000701 1.013321773 1 10.69690297 -7.275912938 24.99635821 0.973667059 1.274870307 0.748208512 0.087262128 441.0074559 761632.6418 0.038395461 0.026018419 5.30E-08 7.275912938 0.301203248 RS(ph)STVAPAQPDGAESEWTDVETR ddPTM_A459_MK2206_30min_R2 2 RSSTVAPAQPDGAESEWTDVETR 23 1 Q02241;H7BYN4;A0A2U3TZL8;Q02241-2;Q02241-3 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 RS(0.76)S(0.12)T(0.12)VAPAQPDGAESEWTDVETR;RS(0.776)S(0.112)T(0.112)VAPAQPDGAESEWTDVETR 183.63 1.69E-17 28405000 29423 38749 26146 30749 26836 27379 28199 20753 24314 21063 TRUE FALSE 31675.6475 36824.78101 27017.69459 28236.70834 25782.2838 28420.92703 24496.43743 23465.48836 26428.78777 20375.71603 1.554578374 1.807287702 1.325975222 1.385802015 1.265343694 1.394843105 1.202236888 1.151639938 1.297072835 1 14.31456314 -1.522878745 0.181384092 1.014220355 3.961145645 0.699985078 0.115824548 29.88410978 0.338513866 0.253086782 24.32116498 0.03 1.522878745 2.94692529 RS(ph)T(ph)FGPS(ph)VEFT(ph)SVLK ddPTM_A459_MK2206_30min_R1 1 RSTFGPSVEFTSVLK 15 1 Q5VTT5-2;Q5VTT5 Q5VTT5-2 MYOM3 Myomesin-3 4 RS(1)T(1)FGPS(0.99)VEFT(0.609)S(0.402)VLK 55.335 0.047833 0 542.64 632.25 589.92 481.34 690.86 632.42 829.65 753.83 682.82 562.92 TRUE FALSE 496.4856185 591.0904101 549.877874 518.4128902 663.3415833 668.2270739 774.3055623 747.2393438 753.8015825 632.6587794 0.784760497 0.934295752 0.869153945 0.81941942 1.048498187 1.056220344 1.223891278 1.181109578 1.191482055 1 9.305283791 -6.557673207 1.801777686 1.157860676 0.856989667 0.761783166 0.07309671 0.157398312 1.038373638 0.027161567 0.028846129 2.77E-07 6.557673207 -0.300871009 RS(ph)TQGVTLTDLQEAEK ddPTM_A459_MK2206_30min_R1 3 RSTQGVTLTDLQEAEK 16 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RS(0.637)T(0.363)QGVTLTDLQEAEK;RS(0.5)T(0.5)QGVTLTDLQEAEK;RS(0.5)T(0.5)QGVTLTDLQEAEK 163.15 1.75E-05 35459300 16315.7 16993.4 14078.7 13244 16413.7 11030.4 15546.7 18586.6 13163 10768.8 TRUE FALSE 14927.96404 15887.12657 13123.07707 14264.05517 15759.90757 11654.93172 14509.60801 18424.09932 14531.34095 12102.92024 1.23341836 1.312668864 1.084290139 1.178563098 1.302157434 0.962985088 1.198851824 1.522285444 1.200647502 1 13.56306757 -7.547956146 24.99998748 1.288993566 1.177573445 0.003151919 0.154074308 557.5889213 555860.4288 0.070043377 0.040441154 2.83E-08 7.547956146 -0.111420121 RS(ph)TQGVTLTDLQEAEK ddPTM_A459_MK2206_30min_R2 3 RSTQGVTLTDLQEAEK 16 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RS(0.5)T(0.5)QGVTLTDLQEAEK;RS(0.466)T(0.466)QGVT(0.058)LT(0.01)DLQEAEK;RS(0.5)T(0.5)QGVTLTDLQEAEK 144.82 0.0001993 30237000 253005 279781 344727 204672 349089 281261 178282 132402 316102 253582 TRUE FALSE 272375.2573 265887.4824 356220.0261 187949.6429 335382.0118 291964.5844 154873.3592 149707.396 343595.9806 245307.6401 1.110341517 1.083894013 1.452135881 0.766179328 1.367189427 1.190197681 0.631343399 0.610284278 1.400673784 1 17.90423264 -7.225399014 24.61322035 0.878098967 1.16269152 0.170985655 0.267036117 773.4887383 528242.8332 0.099790346 0.077294274 5.95E-08 7.225399014 0.284592554 RS(ph)TS(ph)EGAWPQLPSGLSMMR ddPTM_A459_MK2206_30min_R2 1 RSTSEGAWPQLPSGLSMMR 19 1 G3V1A6;P57764 G3V1A6 GSDMD Gasdermin-D 2 RS(0.732)T(0.387)S(0.881)EGAWPQLPSGLSMMR 41.86 0.037344 7207500 0 32662 19332 88803 54396 137880 17468 21107 71032 7574.1 TRUE FALSE 0 31040.05257 19976.51923 81547.51083 52260.13972 143127.12 15174.43062 23865.75737 77210.23496 7326.957737 0 4.236417581 2.726441171 11.12979135 7.132583754 19.53431767 2.071041101 3.257253314 10.53782999 1 12.83899858 -3.435673556 10.94795877 6.499024258 3.566682562 0 5.744742793 0 0 1.329647367 0 0.000366713 3.435673556 -2.932341696 RS(ph)TVLGLPQHVQK ddPTM_A459_MK2206_30min_R2 2 RSTVLGLPQHVQK 13 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 RS(0.5)T(0.5)VLGLPQHVQK;RS(0.5)T(0.5)VLGLPQHVQK 105.25 0.0050616 40061000 154904 214201 226927 225374 248754 234880 196674 152658 227567 202392 TRUE FALSE 166763.5693 203564.0898 234492.6329 206960.2233 238986.6681 243818.523 170850.4676 172610.9248 247360.3663 195787.9656 0.851755974 1.039717069 1.197686651 1.057063046 1.220640234 1.245319252 0.872630077 0.881621729 1.263409452 1 17.57893256 -10.48384724 13.21640228 0.999988143 1.070712015 0.018759859 0.151756825 0 0 0.151191539 0.036669334 3.28E-11 10.48384724 0.070723872 RS(ph)WAS(ph)PVY(ph)T(ph)EADGTFSRLFQK ddPTM_A459_MK2206_30min_R1 1 RSWASPVYTEADGTFSRLFQK 21 2 Q8WWI1-3;E9PMP7;E9PK58;E9PLU6 Q8WWI1-3 LMO7 LIM domain only protein 7 4 RS(1)WAS(1)PVY(0.989)T(0.978)EADGT(0.017)FS(0.017)RLFQK 50.392 0.0453 0 870.14 501.12 375.42 196.56 1498.8 1396.9 1644.4 967.38 388.53 299.67 TRUE FALSE 796.1300237 468.4969969 349.9375364 211.6990853 1439.099622 1475.991271 1534.705076 958.9222987 428.9190839 336.795382 2.363838895 1.391043411 1.039021183 0.628568848 4.272919699 4.382456975 4.556787766 2.847195508 1.273530181 1 8.395728547 -3.8404394 21.70095998 2.482891133 2.480103518 0 1.470966147 0 0 0.374521468 0 0.000144398 3.8404394 -0.002787616 RS(ph)YDVPPPPMEPDHPFYSNISK ddPTM_A459_MK2206_30min_R1 4 RSYDVPPPPMEPDHPFYSNISK 22 1 P18669;Q8N0Y7 P18669 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 1 RS(0.944)Y(0.056)DVPPPPMEPDHPFYSNISK;RS(0.922)Y(0.078)DVPPPPMEPDHPFYSNISK;RS(0.571)Y(0.429)DVPPPPMEPDHPFYSNISK;RS(0.535)Y(0.464)DVPPPPMEPDHPFY(0.001)SNISK 109.25 2.68E-05 66688100 9151.1 8502.6 9521.3 8643.4 9753.84 9697.27 9395.7 9883.8 8626.4 7525.45 TRUE FALSE 8372.750891 7949.079195 8875.020684 9309.116166 9365.323899 10246.32105 8768.929996 9797.386979 9523.14515 8457.75956 0.989949032 0.93985637 1.049334711 1.100659826 1.107305526 1.21146989 1.036791119 1.158390341 1.125965462 1 13.04605983 -5.526329248 2.502021299 1.114802019 0.964272348 0.485257766 0.056958436 0.214653465 2.66776426 0.01538437 0.035328496 2.98E-06 5.526329248 -0.150529671 RS(ph)YDVPPPPMEPDHPFYSNISK ddPTM_A459_MK2206_30min_R2 4 RSYDVPPPPMEPDHPFYSNISK 22 1 P18669;Q8N0Y7 P18669 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 1 RS(0.966)Y(0.034)DVPPPPMEPDHPFYSNISK;RS(0.861)Y(0.139)DVPPPPMEPDHPFYSNISK;RS(0.542)Y(0.458)DVPPPPMEPDHPFYSNISK;RS(0.544)Y(0.456)DVPPPPMEPDHPFYSNISK 80.236 0.0014299 48073800 115533 130461 125943 136358 141048 118795 150011 111570 110212 122820 TRUE FALSE 124378.2953 123982.4964 130141.8768 125217.1152 135509.7468 123315.827 130314.3755 126152.5821 119798.0405 118812.3935 1.046846139 1.043514846 1.095356073 1.053906176 1.140535451 1.037903735 1.096807931 1.061779655 1.008295827 1 16.85832581 -8.243263052 3.528609596 1.000687752 1.074002827 0.460736129 0.029661415 0.200618044 5.070321239 0.024995027 0.007458148 5.71E-09 8.243263052 0.073315075 RSAS(ph)ASHQADIK ddPTM_A459_MK2206_30min_R2 1 RSASASHQADIK 12 1 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 RS(0.166)AS(0.805)AS(0.029)HQADIK 65.511 0.040091 17883000 64016 33569 40241 41362 37656 47621 81385 37230 49364 38018 TRUE FALSE 68917.11418 31902.01227 41582.61486 37982.59229 36177.43623 49433.25052 70699.05174 42096.08883 53657.59149 36777.47577 1.873894625 0.867433439 1.130654401 1.032767788 0.983684592 1.344117547 1.922346497 1.144616044 1.458979725 1 15.16653484 -6.982239115 20.42404342 1.42777866 1.151197142 0.068896846 0.339715758 59.76435245 68722.55328 0.116106386 0.102333722 1.04E-07 6.982239115 -0.276581519 RSAS(ph)PDDDLGSSNWEAADLGNEER ddPTM_A459_MK2206_30min_R1 1 RSASPDDDLGSSNWEAADLGNEER 24 1 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 RS(0.251)AS(0.749)PDDDLGSSNWEAADLGNEER 127.92 6.71E-08 130420000 2618.7 2543.9 2689.5 2526.2 2852.2 2895.5 2624.1 2876.6 2118.5 1561.5 TRUE FALSE 2395.965814 2378.291648 2506.944233 2720.768362 2738.590834 3059.440708 2449.051077 2851.450189 2338.725656 1754.950409 1.365261264 1.35519023 1.428498618 1.550339171 1.560494713 1.74332032 1.395510132 1.624803855 1.332644868 1 10.77721455 -8.579785612 5.075613331 1.000065398 1.502724046 0.634527381 0.11670531 0.224871012 17.63195972 0.119122021 0.030971577 2.63E-09 8.579785612 0.502658649 RSAS(ph)PDDDLGSSNWEAADLGNEER ddPTM_A459_MK2206_30min_R2 1 RSASPDDDLGSSNWEAADLGNEER 24 1 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 RS(0.27)AS(0.73)PDDDLGSSNWEAADLGNEER 117.66 7.73E-08 99469000 13206 22337 22240 24570 23089 20971 21129 17791 22595 18461 TRUE FALSE 14217.06151 21227.77706 22981.4705 22562.5524 22182.40985 21769.0661 18354.73692 20116.34479 24560.27226 17858.61908 0.796089633 1.188657251 1.286855965 1.263398491 1.242112268 1.218966931 1.027780302 1.126422188 1.375261555 1 14.12433291 -4.761958631 6.920771944 1.199138719 0.787179159 0.541234418 0.109267002 0.084604358 22.75411374 0.027127352 0.164249762 1.73E-05 4.761958631 -0.411959561 RSASAS(ph)HQADIK ddPTM_A459_MK2206_30min_R2 1 RSASASHQADIK 12 1 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 RS(0.005)AS(0.323)AS(0.672)HQADIK 60.968 0.047817 2564700 25817 12572 12969 15340 12934 19778 33155 13801 21045 14889 TRUE FALSE 27793.56937 11947.69276 13401.37999 14086.67293 12426.14617 20530.66565 28801.70867 15604.83809 22875.45606 14403.17315 1.929683764 0.829518096 0.930446357 0.97802566 0.862736707 1.425426567 1.999678014 1.083430569 1.58822336 1 13.81409907 -6.854079799 7.935255597 1.464233449 1.074558772 0.131336803 0.391076657 0.422852943 31.74965288 0.135237861 0.119370005 1.40E-07 6.854079799 -0.389674677 RSASPDDDLGSS(ph)NWEAADLGNEERK ddPTM_A459_MK2206_30min_R2 1 RSASPDDDLGSSNWEAADLGNEERK 25 2 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 RS(0.015)AS(0.052)PDDDLGS(0.408)S(0.524)NWEAADLGNEERK 53.444 0.019707 4646400 8701.2 11144 9803.7 9999.7 11334 9439.9 10614 6325.2 7676.2 10689 TRUE FALSE 9367.370562 10590.60516 10130.55046 9182.692523 10888.97021 9799.142009 9220.36905 7151.925358 8343.862001 10340.21881 0.905916087 1.024214803 0.979723027 0.88805592 1.053069613 0.947672597 0.891699608 0.69166093 0.806932828 1 13.33597909 -7.448697355 3.721618217 0.808865412 0.969297245 0.317963118 0.085119698 0.224220368 5.951945838 0.037620953 0.023440048 3.56E-08 7.448697355 0.160431832 RSCFESS(ph)PDPELK ddPTM_A459_MK2206_30min_R1 2 RSCFESSPDPELK 13 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RS(0.001)CFES(0.18)S(0.819)PDPELK;RS(0.049)CFES(0.192)S(0.759)PDPELK 124.78 0.0011269 12341100 11987.6 12640.4 13658.5 11853.9 12209.7 11149 11530.3 11696.4 11467.1 10903.4 TRUE FALSE 10967.99167 11817.50766 12731.39907 12766.88943 11723.36179 11780.24675 10761.13473 11594.13961 12659.14608 12254.19551 0.895039716 0.964364217 1.038942056 1.041838236 0.956681472 0.961323551 0.878159216 0.946136333 1.033045872 1 13.58098815 -6.465947465 24.95150725 0.955460612 0.988898677 0.02876923 0.053682802 816.5703029 357881.2209 0.017722198 0.020094975 3.42E-07 6.465947465 0.033438065 RSCFESS(ph)PDPELK ddPTM_A459_MK2206_30min_R2 1 RSCFESSPDPELK 13 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RS(0.001)CFES(0.049)S(0.95)PDPELK 115.58 0.0020412 19315000 113920 151450 127600 121570 112920 109370 150020 128170 109010 122370 TRUE FALSE 122641.8028 143929.2132 131854.1203 111637.3421 108486.1934 113532.152 130322.1938 144922.2591 118491.4928 118377.0769 1.036026619 1.215853753 1.113848422 0.943065541 0.916445956 0.959072102 1.100907348 1.224242589 1.000966537 1 16.85303021 -5.573488727 11.9334825 1.026554386 1.135659342 0.197727897 0.092722679 1.268495738 296.1128087 0.027833319 0.048231664 2.67E-06 5.573488727 0.109104957 RSDLDLGYEPEGSASPT(ph)PPYLK ddPTM_A459_MK2206_30min_R2 1 RSDLDLGYEPEGSASPTPPYLK 22 1 O15169-2;O15169 O15169-2 AXIN1 Axin-1 1 RSDLDLGYEPEGS(0.012)AS(0.045)PT(0.92)PPY(0.023)LK 75.703 0.0022364 5810700 15278 23040 21935 23969 24553 23389 24248 20266 25311 22063 TRUE FALSE 16447.69543 21895.8671 22666.30195 22010.65603 23588.92585 24279.08478 21064.20847 22914.83578 27512.50503 21343.08612 0.770633419 1.025899768 1.061997399 1.03127804 1.105225632 1.137562049 0.986933584 1.073642099 1.289059365 1 14.38148118 -4.229431828 1.318027666 1.089717321 1.32E-12 0.577162723 0.08069299 3.587919034 1.998166812 0.023168551 7.512025125 5.90E-05 4.229431828 -1.089717321 RSDS(ph)LLSFR ddPTM_A459_MK2206_30min_R1 4 RSDSLLSFR 9 1 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 RS(0.009)DS(0.991)LLSFR;RS(0.009)DS(0.968)LLS(0.023)FR;RS(0.209)DS(0.791)LLSFR;RS(0.322)DS(0.678)LLSFR 120.55 0.0033593 50985300 6426.18 6296.99 6723.24 5354.01 6739.36 6268.12 6023.62 6055.89 5369.81 5105.32 TRUE FALSE 5879.599646 5887.054806 6266.885201 5766.376778 6470.91702 6623.015538 5621.795301 6002.943992 5928.020966 5737.805585 1.024712246 1.026011551 1.092209401 1.004979463 1.127768609 1.154276742 0.979781419 1.046209026 1.033151242 1 12.48628337 -7.309670886 24.99991629 1.018636197 1.070038585 0.25919116 0.046876307 676.9063456 350859.8931 0.020728152 0.013974941 4.90E-08 7.309670886 0.051402388 RSDS(ph)LLSFR ddPTM_A459_MK2206_30min_R2 1 RSDSLLSFR 9 1 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 RS(0.099)DS(0.901)LLSFR 103.43 0.0078272 18299000 10381 11839 10106 12702 14325 14336 14115 8548.6 12141 11813 TRUE FALSE 11175.77734 11251.09248 10442.929 11664.20597 13762.52852 14881.56653 12261.68354 9665.931372 13197.00223 11427.54278 0.977968541 0.984559209 0.913838539 1.020709893 1.204329644 1.302254283 1.072993887 0.845845127 1.154841639 1 13.4802276 -6.005888946 22.0314963 1.099405767 0.962350429 0.225477857 0.11540898 93.4833377 349753.2932 0.036091081 0.051425555 9.87E-07 6.005888946 -0.137055338 RSDS(ph)PEIPFQAAAGPSDGLDASSPGNSFVGLR ddPTM_A459_MK2206_30min_R1 3 RSDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 32 1 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 RS(0.193)DS(0.807)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.325)DS(0.675)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.077)DS(0.923)PEIPFQAAAGPSDGLDASSPGNSFVGLR 112.73 1.23E-12 33874200 3030.17 2767.65 3298.32 2933.6 4101.42 3034.13 3858.3 4235.1 2846.81 2328.05 TRUE FALSE 2772.438129 2587.475482 3074.439228 3159.54638 3938.051756 3205.919819 3600.919847 4198.072967 3142.746087 2616.46641 1.059611589 0.988919817 1.175034855 1.207562371 1.50510312 1.22528606 1.376253039 1.604481889 1.201141385 1 11.35340402 -5.697899927 1.89091941 1.346134666 1.027090611 0.313786595 0.161810324 0.347674782 2.51911006 0.047366548 0.102699378 2.00E-06 5.697899927 -0.319044054 RSDS(ph)PEIPFQAAAGPSDGLDASSPGNSFVGLR ddPTM_A459_MK2206_30min_R2 6 RSDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 32 1 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 RS(0.353)DS(0.647)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.369)DS(0.631)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.057)DS(0.943)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.129)DS(0.871)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.322)DS(0.678)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.353)DS(0.647)PEIPFQAAAGPSDGLDASSPGNSFVGLR 104.86 6.29E-12 37138000 32080.01 46060.67 39349.2 45012.5 50306 52628.1 38723.3 36871.8 53978 41353.2 TRUE FALSE 34536.08023 43773.36411 40661.08269 41334.83476 48330.73367 54630.89922 33638.88419 41691.07086 58672.90887 40003.84847 0.863318944 1.094228825 1.016429275 1.033271456 1.208152103 1.36564109 0.840891201 1.042176502 1.46668161 1 15.28785118 -3.713110421 0.696077778 1.140140219 6.35E-09 0.170350204 0.173828823 22.90354938 2.737187565 0.071347367 28.98436966 0.000193593 3.713110421 -1.140140213 RSDS(ph)VSASER ddPTM_A459_MK2206_30min_R1 2 RSDSVSASER 10 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 RS(0.052)DS(0.819)VS(0.129)ASER;RS(0.001)DS(0.918)VS(0.081)ASER 124.48 0.0068719 16693000 5217.2 5180.1 6155.4 4984.5 4915.7 3715.1 4548.3 5534.6 1251.23 3796.5 TRUE FALSE 4773.449743 4842.874548 5737.588598 5368.407054 4719.89726 3925.445751 4244.891206 5486.211576 1381.299836 4266.839082 1.118732076 1.135002857 1.344692989 1.258169561 1.10618122 0.919989171 0.994856174 1.28577888 0.323729067 1 12.05895199 -7.344153981 0.788294701 0.810860109 1.21096796 0.298308527 0.229523591 0.858761678 1.027761878 0.188064037 0.108281736 4.53E-08 7.344153981 0.400107851 RSDSVSASER ddPTM_A459_MK2206_30min_R2 2 RSDSVSASER 10 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 0 ; 160.91 0.00058745 3268400 12272.9 10807.2 12069 14060.8 15183.7 15111.1 15690 25366 18968.9 11250.9 FALSE TRUE 13212.52266 10270.53016 12471.37444 12911.98766 14587.51165 15686.1635 13629.88415 28681.42329 20618.78063 10883.78405 1.213964058 0.94365435 1.145867501 1.18635096 1.340297784 1.441241706 1.252311153 2.635243694 1.894449626 1 13.40989262 -7.60927136 14.5090376 1.948569301 1.213491553 0.341911841 0.389911331 0.964189115 159.239776 0.17532958 0.101212022 2.46E-08 7.60927136 -0.735077748 RSEACPCQPDSGS(ph)PLPAEEEK ddPTM_A459_MK2206_30min_R1 4 RSEACPCQPDSGSPLPAEEEK 21 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3 A0A0G2JMS7 SCRIB Protein scribble homolog 1 RSEACPCQPDS(0.211)GS(0.789)PLPAEEEK;RSEACPCQPDS(0.002)GS(0.998)PLPAEEEK;RSEACPCQPDS(0.009)GS(0.991)PLPAEEEK;RSEACPCQPDS(0.01)GS(0.99)PLPAEEEK 144 3.67E-06 93464000 7800.9 8410 8365.7 7167.4 7755.8 7006.19 9511.3 9705.2 11148.2 9905.7 TRUE FALSE 7137.392491 7862.507471 7797.859592 7719.43439 7446.870063 7402.874423 8876.818531 9620.34846 12307.09528 11132.8929 0.64110852 0.706241185 0.700434259 0.693389801 0.668907006 0.664955146 0.797350573 0.86413734 1.105471452 1 13.44254091 -7.865972861 1.706285282 1.050694102 0.682947804 0.925072015 0.041121067 0.086708066 0.469862418 0.031343073 0.011417098 1.36E-08 7.865972861 -0.367746298 RSEACPCQPDSGS(ph)PLPAEEEK ddPTM_A459_MK2206_30min_R2 4 RSEACPCQPDSGSPLPAEEEK 21 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3 A0A0G2JMS7 SCRIB Protein scribble homolog 1 RSEACPCQPDS(0.246)GS(0.754)PLPAEEEK;RSEACPCQPDS(0.007)GS(0.993)PLPAEEEK;RSEACPCQPDS(0.008)GS(0.992)PLPAEEEK;RSEACPCQPDS(0.035)GS(0.965)PLPAEEEK 140.71 9.50E-06 162734000 181076 124428.2 152258 149496 142093 134091 254104 143786 172746 189405 TRUE FALSE 194939.3178 118249.2765 157334.2057 137281.6986 136513.7149 139193.927 220739.8396 162579.3239 187771.1348 183224.7304 1.063935624 0.645378363 0.85869525 0.749253107 0.745061622 0.759689626 1.204749158 0.887321944 1.024813269 1 17.48325472 -7.233333804 24.89573961 1.019831288 0.793837666 0.435735995 0.125261337 619.1686665 548456.3878 0.045139536 0.034957087 5.84E-08 7.233333804 -0.225993622 RSEEHS(ph)PPR ddPTM_A459_MK2206_30min_R2 2 RSEEHSPPR 9 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 RSEEHS(1)PPR;RS(0.01)EEHS(0.99)PPR 80.979 0.02312 18466900 5025.5 3508.4 4256.4 5504.4 8244.6 7190.4 4163.5 9399.1 10219 6746.3 TRUE FALSE 5410.256144 3334.177958 4398.306252 5054.672912 7920.875578 7464.035711 3616.827449 10627.59464 11107.83015 6526.168783 0.829009534 0.510893614 0.673949203 0.77452378 1.213709887 1.143708653 0.554203786 1.628458441 1.702044571 1 12.67202058 -6.672784604 0.649262797 1.372035616 0.613139352 0.390271673 0.310225279 0.824324369 0.767834142 0.246182764 0.288802583 2.12E-07 6.672784604 -0.758896265 RSEEVVR ddPTM_A459_MK2206_30min_R2 4 RSEEVVR 7 1 O14907;A0A087X282 O14907 TAX1BP3 Tax1-binding protein 3 0 ;;; 114.28 0.018641 6547940 25525.9 24925 22718.2 27743.7 29145.4 23950.4 32797 34214 33047 31982.9 FALSE TRUE 27480.18253 23687.26074 23475.61345 25476.95096 28001.00515 24861.84925 28490.7145 38685.88727 35921.36832 30939.30059 0.88819663 0.765604273 0.758763547 0.823449479 0.905030321 0.803568561 0.920858389 1.250380149 1.161027161 1 14.91715296 -7.603761157 4.729835158 1.151796662 0.824655442 0.787423952 0.072461793 0.08675594 3.517400662 0.035401036 0.019863052 2.49E-08 7.603761157 -0.32714122 RSELIAK ddPTM_A459_MK2206_30min_R2 1 RSELIAK 7 1 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105 Q01105-2;Q01105 SET;SETSIP Protein SET;Protein SETSIP 0 98.629 0.029405 4206900 35354 51186 43604 53430 52227 47200 50766 42810 44463 46113 FALSE TRUE 38060.72942 48644.17767 45057.7356 49064.59809 50176.30556 48996.22907 44100.36322 48405.41399 48330.31137 44608.33659 0.8532201 1.090472799 1.010074328 1.099897504 1.124819023 1.098364853 0.988612591 1.085120354 1.083436753 1 15.44502573 -4.757639125 24.999694 1.06716511 0.853219795 0.662511764 0.045210872 67.12704905 441526.9041 0.011267632 0.082659566 1.75E-05 4.757639125 -0.213945315 RSENGSGS(ph)T(ph)MMQT(ph)K ddPTM_A459_MK2206_30min_R2 1 RSENGSGSTMMQTK 14 1 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6;P53814-2;A0A096LNK9 A0A087WVP4 SMTN Smoothelin 3 RS(0.001)ENGS(0.007)GS(0.998)T(0.998)MMQT(0.996)K 50.155 0.047773 0 12311 15130 16558 17384 14575 15315 16725 13641 13757 16290 TRUE FALSE 13253.53963 14378.6662 17110.03546 15963.67159 14002.71227 15897.82306 14528.98741 15423.92554 14953.55899 15758.45863 0.841042892 0.912441155 1.085768339 1.0130224 0.888583877 1.008843785 0.921980236 0.978771204 0.948922692 1 13.94383881 -5.006952326 12.53019069 0.978238107 0.858810312 0.423186954 0.051537558 0.459238365 844.3172515 0.013201434 0.042421986 9.84E-06 5.006952326 -0.119427795 RSEPQPEEGS(ph)PAGGQK ddPTM_A459_MK2206_30min_R1 1 RSEPQPEEGSPAGGQK 16 1 F8WE91;Q9Y6K1-3;Q9Y6K1 F8WE91 DNMT3A DNA (cytosine-5)-methyltransferase 3A 1 RSEPQPEEGS(1)PAGGQK 90.017 0.0065191 3150600 1200.7 1316.6 1030.4 1217.2 1202.7 1039.4 1136.3 967.1 1008.5 1024.1 TRUE FALSE 1098.57416 1230.889101 960.4593189 1310.948955 1154.793912 1098.24993 1060.4995 958.6447467 1113.337184 1150.97324 0.954474111 1.069433292 0.834475803 1.13899169 1.003319515 0.95419241 0.921393707 0.832899249 0.967300668 1 10.16863858 -6.972188706 3.179772728 0.917586115 1.002101595 0.1280521 0.083741127 0.444283693 9.285991143 0.03174672 0.026282172 1.07E-07 6.972188706 0.08451548 RSEPQPEEGS(ph)PAGGQK ddPTM_A459_MK2206_30min_R2 2 RSEPQPEEGSPAGGQK 16 1 F8WE91;Q9Y6K1-3;Q9Y6K1 F8WE91 DNMT3A DNA (cytosine-5)-methyltransferase 3A 1 RSEPQPEEGS(1)PAGGQK;RSEPQPEEGS(1)PAGGQK 137.99 0.00020835 11457000 29649 39469 34529 40418 38477 32022 39357 31896 28426 32012 TRUE FALSE 31918.95024 37509.02685 35680.17963 37115.72011 36966.19965 33240.61965 34189.37862 36064.91672 30898.4421 30967.45106 1.030725783 1.211240369 1.152183289 1.19853972 1.193711409 1.073405092 1.104042388 1.164607208 0.997771565 1 14.91846502 -8.266196405 24.74957111 0.998885749 1.143949603 0.519335404 0.05465357 289.9269189 1508382.69 0.047267302 0.013776305 5.42E-09 8.266196405 0.145063854 RSES(ph)PPAELPSLR ddPTM_A459_MK2206_30min_R1 2 RSESPPAELPSLR 13 1 Q14669;Q14669-2;Q14669-3;G5E9G6;H7C1L9 Q14669;H7C1L9 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 RS(0.379)ES(0.621)PPAELPSLR;RS(0.13)ES(0.87)PPAELPSLR 119.96 0.0016055 29564300 3162.6 3323 2984.5 3098 3285.7 3325 3700.5 3100.6 2921.6 2874.9 TRUE FALSE 2893.604263 3106.672096 2781.920455 3336.608497 3154.823611 3513.258627 3453.646397 3073.491781 3225.310775 3231.064316 0.895557618 0.961501162 0.860991978 1.032665453 0.976403842 1.087337881 1.068888162 0.951232003 0.998219305 1 11.65779375 -5.773598916 24.99997947 1.01783759 0.911565341 0.562441893 0.044519596 167.4152703 344205.2191 0.012974609 0.019406427 1.68E-06 5.773598916 -0.106272249 RSES(ph)PPAELPSLR ddPTM_A459_MK2206_30min_R2 2 RSESPPAELPSLR 13 1 Q14669;Q14669-2;Q14669-3;G5E9G6;H7C1L9 Q14669;H7C1L9 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 RS(0.002)ES(0.997)PPAELPS(0.001)LR;RS(0.384)ES(0.61)PPAELPS(0.006)LR 145.86 0.0011061 23801000 115050 134324 112607 137680 113588 138904 159292 117921 104737 108434 TRUE FALSE 123858.3165 127653.6655 116361.2612 126431.1036 109127.9644 144190.0891 138376.7691 133333.6796 113846.8349 104895.8075 1.180774708 1.216956793 1.10930326 1.205301781 1.040346292 1.374602976 1.319183029 1.271105898 1.085332557 1 16.67859749 -8.476014032 4.351512345 1.000889631 1.213336468 0.380448649 0.090914902 0.204427601 8.528236841 0.093144304 0.024347173 3.34E-09 8.476014032 0.212446837 RSFAPSTPLT(ph)GR ddPTM_A459_MK2206_30min_R2 1 RSFAPSTPLTGR 12 1 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 RSFAPS(0.008)T(0.038)PLT(0.954)GR 107.11 0.010759 3304400 8153.9 15446 13861 16462 15736 13786 16400 9693.1 12826 14284 TRUE FALSE 8778.168853 14678.9741 14323.11882 15117.00194 15118.12557 14310.63589 14246.6603 10960.02145 13941.5823 13817.91425 0.635274521 1.062314748 1.036561565 1.094014745 1.094096063 1.035658178 1.031028276 0.793174806 1.008949835 1 13.75425224 -4.757320807 24.99935386 1.017247771 0.635273964 0.667925962 0.080812619 80.60251546 489184.3345 0.021999211 0.165070445 1.75E-05 4.757320807 -0.381973808 RSGS(ph)PLEK ddPTM_A459_MK2206_30min_R2 1 RSGSPLEK 8 1 Q9NRA8;Q9NRA8-3;B1AKL4;B1AKL5 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 RS(0.042)GS(0.958)PLEK 77.288 0.027596 4414800 32710 21305 25243 25871 37907 27065 34273 94581 69986 33908 TRUE FALSE 35214.30275 20247.02468 26084.58902 23757.25654 36418.58071 28094.97754 29772.91393 106943.0614 76073.25577 32801.58474 1.073554922 0.617257515 0.795223439 0.724271609 1.11026894 0.856512811 0.907666937 3.260301668 2.319194526 1 15.0014779 -7.705544642 12.22974813 2.341726352 0.859210248 0.560252287 0.532598727 0.480143005 104.0626523 0.235138197 0.135630832 1.97E-08 7.705544642 -1.482516104 RSHS(ph)PSIDGTPK ddPTM_A459_MK2206_30min_R2 1 RSHSPSIDGTPK 12 1 Q9BWT3-2;Q9BWT3;A0A0C4DH56 Q9BWT3-2 PAPOLG Poly(A) polymerase gamma 1 RS(0.136)HS(0.857)PS(0.007)IDGTPK 62.813 0.044536 6759900 27578 48560 37132 50884 41325 39415 47126 38203 34985 43164 TRUE FALSE 29689.39288 46148.58101 38369.96235 46726.61443 39702.37286 40914.96544 40938.29959 43196.26327 38027.93206 41755.56221 0.711028455 1.105207991 0.91891859 1.119051258 0.950828363 0.979868628 0.980427455 1.034503213 0.910727339 1 15.34968077 -4.748074334 24.99624295 0.999443621 0.711027753 0.629663116 0.066471574 406.1146479 759499.7106 0.015166489 0.288781497 1.79E-05 4.748074334 -0.288415868 RSIS(ph)SPNVNR ddPTM_A459_MK2206_30min_R1 1 RSISSPNVNR 10 1 Q9NQT8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 RSIS(0.787)S(0.213)PNVNR 103.46 0.025492 2964000 1658.8 1573 1575 1363.8 1645.9 1617.1 1781 1533.8 1130.8 1254.6 TRUE FALSE 1517.710349 1470.597414 1468.093388 1468.840112 1580.340318 1708.658805 1662.19274 1520.390148 1248.350707 1410.02932 1.076367936 1.042955202 1.041179334 1.041708915 1.12078543 1.211789557 1.178835586 1.078268464 0.885336701 1 10.46150945 -8.159780824 5.936527368 0.944428562 1.101631814 0.518644775 0.060463444 0.194757922 9.209230789 0.047907763 0.017553853 6.92E-09 8.159780824 0.157203252 RSLS(ph)PILPGR ddPTM_A459_MK2206_30min_R2 2 RSLSPILPGR 10 1 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 RS(0.242)LS(0.758)PILPGR;RS(0.376)LS(0.624)PILPGR 90.793 0.014856 18450400 15732.8 21800 11722.6 23260 22590 20186 18272.8 18128 23761 12831.7 TRUE FALSE 16937.31526 20717.4437 12113.42563 21359.58359 21703.00309 20954.19238 15873.55941 20497.39184 25827.68883 12413.00268 1.364481721 1.669011458 0.975865868 1.720742688 1.748408798 1.688084093 1.278784821 1.65128393 2.080696307 1 13.59956452 RSNS(ph)TTQVSQPR ddPTM_A459_MK2206_30min_R1 2 RSNSTTQVSQPR 12 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 RS(0.002)NS(0.735)T(0.238)T(0.025)QVSQPR;RS(0.024)NS(0.819)T(0.078)T(0.078)QVSQPR 115.09 0.0046225 6635100 1223.96 936.96 1160.49 956.18 1532.78 1136.99 1313.8 911.86 732.28 780.98 TRUE FALSE 1119.855775 875.9637337 1081.719172 1029.825149 1471.726127 1201.365391 1226.158799 903.8877042 808.4031265 877.7336985 1.275849129 0.997983483 1.232400185 1.173277443 1.676734218 1.368712849 1.396959922 1.029797199 0.921011838 1 9.777639487 -7.866977029 5.446670138 0.966796347 1.299938867 0.442562902 0.165124776 0.217696633 9.569615328 0.102730844 0.048278577 1.36E-08 7.866977029 0.33314252 RSNS(ph)TTQVSQPR ddPTM_A459_MK2206_30min_R2 3 RSNSTTQVSQPR 12 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 RS(0.001)NS(0.628)T(0.186)T(0.186)QVSQPR;RS(0.001)NS(0.993)T(0.003)T(0.003)QVSQPR;RSNS(0.982)T(0.018)TQVSQPR 168.67 0.00052523 11168500 7120.2 12596.6 11476.9 13366.6 12974.7 11426.6 13165.1 12638.9 13226.2 11456.8 TRUE FALSE 7665.327987 11971.07116 11859.53412 12274.50602 12465.24809 11861.44727 11436.50656 14290.84763 14376.59097 11082.96555 0.691631491 1.080132488 1.070068662 1.107510978 1.124721359 1.070241283 1.031899495 1.289442573 1.297179072 1 13.43605635 -4.406005348 1.682800398 1.131459247 1.14E-10 0.649923273 0.094183693 2.005903475 2.432948869 0.027290336 5.018124675 3.93E-05 4.406005348 -1.131459246 RSNVSSPATPTASSSSST(ph)TPTR ddPTM_A459_MK2206_30min_R2 2 RSNVSSPATPTASSSSSTTPTR 22 1 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 RSNVSSPATPTASS(0.001)S(0.001)S(0.042)S(0.042)T(0.495)T(0.307)PT(0.113)R;RSNVSSPATPTAS(0.001)S(0.007)S(0.021)S(0.105)S(0.105)T(0.329)T(0.329)PT(0.105)R 140.59 1.03E-05 7662100 9740.6 13781.2 11193.9 12540.1 13873.7 14910.3 11907.9 8737.3 12078.7 10865.6 TRUE FALSE 10486.34783 13096.84565 11567.09904 11515.53372 13328.94883 15477.72191 10344.37843 9879.29511 13129.28349 10511.05636 0.997649281 1.246006605 1.1004697 1.095563882 1.268088418 1.472518211 0.984142609 0.939895551 1.249092674 1 13.35962005 RSNVSSPATPTASSSSSTT(ph)PTR ddPTM_A459_MK2206_30min_R1 1 RSNVSSPATPTASSSSSTTPTR 22 1 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 RSNVSSPATPTASS(0.001)S(0.007)S(0.029)S(0.029)T(0.214)T(0.588)PT(0.133)R 119.46 7.26E-05 0 817.07 471.41 640.13 576.84 625.47 646.88 649.05 803.61 325.19 432.16 TRUE FALSE 747.5739059 440.7211233 596.6797591 621.2683167 600.5562054 683.5057866 605.7530588 796.5841225 358.9946642 485.6992434 1.539170415 0.90739512 1.228496373 1.279121442 1.236477539 1.407261378 1.247177275 1.640076927 0.739129552 1 8.923919429 -8.281231245 24.99537438 0.869564722 1.292048635 0.443733877 0.19666204 874.6488525 1104593.27 0.182232047 0.047313293 5.23E-09 8.281231245 0.422483913 RSPGGGS(ph)EANGLALVSGFK ddPTM_A459_MK2206_30min_R2 1 RSPGGGSEANGLALVSGFK 19 1 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 RS(0.116)PGGGS(0.884)EANGLALVSGFK 93.407 0.0010458 4408800 49242 61304 48575 77794 53211 76317 58052 46168 56934 50567 TRUE FALSE 53012.00538 58259.7325 50194.46626 71437.98135 51121.66878 79221.29691 50429.70267 52202.31612 61886.01641 48917.00293 1.083713274 1.190991455 1.026114914 1.460391624 1.04506952 1.619504307 1.030923802 1.067160966 1.265122814 1 15.57804839 -11.11824449 5.721196711 0.999030623 1.200209842 0.089381007 0.190291844 0.002264539 0.000160161 0.177330551 0.042808724 7.62E-12 11.11824449 0.201179219 RSPQQTVPYVVPLS(ph)PK ddPTM_A459_MK2206_30min_R2 2 RSPQQTVPYVVPLSPK 16 1 Q9UQR0;H0Y6S1;B4DRC2 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 1 RSPQQTVPYVVPLS(1)PK;RSPQQTVPYVVPLS(1)PK 127.32 0.00095386 44805500 278273 322235 310400 280363 299903 192555 350617 296448 258112 309019 TRUE FALSE 299577.7948 306233.2785 320748.5811 257456.4461 288127.3013 199882.8155 304580.5667 335194.7715 280562.1152 298935.7353 1.002147818 1.024411746 1.072968345 0.861243457 0.96384362 0.668648113 1.018883093 1.121293749 0.938536555 1 18.18947584 -10.68508316 17.20972263 1 0.963153564 0.00827142 0.119654547 0 0 0.121686295 0.029513261 2.06E-11 10.68508316 -0.036846436 RSPS(ph)APVCK ddPTM_A459_MK2206_30min_R1 1 RSPSAPVCK 9 1 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 RS(0.133)PS(0.867)APVCK 63.944 0.047585 2816000 2889.7 2880.1 3379.4 2891.5 3334.4 2564.8 3262.1 2776.6 2429.4 2688 TRUE FALSE 2643.915841 2692.604967 3150.015744 3114.203831 3201.583787 2710.01676 3044.491261 2752.324479 2681.944824 3021.009733 0.875176207 0.891293046 1.042702944 1.030848659 1.059772748 0.897056613 1.007772741 0.911061109 0.887764377 1 11.56081512 -10.36979209 14.89177198 0.99999024 0.960319212 0.032012621 0.069000717 0 0 0.071097083 0.017243575 4.27E-11 10.36979209 -0.039671029 RSPS(ph)PLGTSVR ddPTM_A459_MK2206_30min_R1 2 RSPSPLGTSVR 11 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 RS(0.009)PS(0.983)PLGT(0.008)SVR;RS(0.001)PS(0.805)PLGT(0.173)S(0.022)VR 126.1 0.005789 24616000 6457.6 6651.4 7111 5829.4 7631.2 6447.7 6951.5 6954.1 6000.2 4963 TRUE FALSE 5908.34721 6218.392651 6628.325132 6278.381398 7327.233145 6812.763202 6487.778119 6893.301037 6623.942262 5577.853909 1.059250978 1.114836056 1.188328924 1.125590864 1.313629447 1.221395059 1.163131596 1.235833916 1.187543161 1 12.44549443 -4.953597457 1.377761581 1.195086922 1.02584867 0.183119202 0.077569271 1.31646635 2.841061055 0.021882262 0.285571719 1.11E-05 4.953597457 -0.169238252 RSPS(ph)PLGTSVR ddPTM_A459_MK2206_30min_R2 2 RSPSPLGTSVR 11 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 RSPS(0.999)PLGT(0.001)SVR;RS(0.007)PS(0.991)PLGT(0.001)SVR 155.14 0.00095265 98378000 126750 180322 140370 166525 188143 195343 177760 160585 170412 166341 TRUE FALSE 136454.0775 171367.4717 145049.8657 152919.3748 180755.5605 202776.9147 154419.8985 181574.0109 185234.1277 160913.3068 0.847997473 1.064967684 0.901416226 0.950321498 1.12331021 1.260162499 0.959646542 1.128396492 1.151142385 1 17.29592411 -6.257819812 23.00993547 1.110809004 0.94717801 0.42474113 0.092381158 102.1181855 649169.7847 0.027072923 0.033527545 5.52E-07 6.257819812 -0.163630995 RSPT(ph)DSDVSLDSEDSGAK ddPTM_A459_MK2206_30min_R1 1 RSPTDSDVSLDSEDSGAK 18 1 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 RS(0.283)PT(0.703)DS(0.014)DVSLDSEDSGAK 67.418 0.036859 12717000 4162.3 4832 4566 4594.7 4425.3 3698.4 3667.4 4200.9 3494.9 2342.8 TRUE FALSE 3808.274528 4517.435922 4256.072642 4948.58459 4249.03093 3907.800212 3422.754438 4164.171974 3858.207362 2633.043751 1.446339251 1.715670664 1.61640787 1.879416013 1.613733508 1.484137972 1.299923116 1.581505044 1.465303172 1 11.36251578 -6.836543928 2.989501218 1.385832715 1.671750359 0.415465956 0.173826047 0.281039747 5.079586136 0.06371382 0.056733928 1.46E-07 6.836543928 0.285917644 RSPT(ph)DSDVSLDSEDSGAK ddPTM_A459_MK2206_30min_R2 3 RSPTDSDVSLDSEDSGAK 18 1 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 RS(0.223)PT(0.777)DS(0.001)DVSLDSEDSGAK;RS(0.223)PT(0.712)DS(0.065)DVSLDSEDSGAK;RS(0.027)PT(0.956)DS(0.017)DVSLDSEDSGAK 182.13 1.19E-09 37353100 130318 168631 156197 181612 169166 134505 172199 128930 141322 157485 TRUE FALSE 140295.2463 160257.0298 161404.53 166773.7187 162523.6928 139623.682 149589.0645 145781.5937 153613.9321 152346.2773 0.920897108 1.051926129 1.059458313 1.094701633 1.066804491 0.916488965 0.981901672 0.956909458 1.008320878 1 17.21699472 -6.745689349 24.99974328 0.970604618 1.043747178 0.308862627 0.049055247 284.2586722 451197.9233 0.016553298 0.016500227 1.80E-07 6.745689349 0.07314256 RSPTDS(ph)DVSLDSEDSGAK ddPTM_A459_MK2206_30min_R2 1 RSPTDSDVSLDSEDSGAK 18 1 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 RS(0.004)PT(0.061)DS(0.501)DVS(0.423)LDS(0.01)EDSGAK 254.26 3.75E-33 9770700 18680 20873 24161 22702 21801 20186 29123 15329 18807 22467 TRUE FALSE 20110.15516 19836.47717 24966.51568 20847.17398 20944.9832 20954.19238 25299.11512 17332.55293 20442.79886 21733.90363 0.925289608 0.912697393 1.148735915 0.959200627 0.963700933 0.964124657 1.164039169 0.797489178 0.940594898 1 14.4076597 -7.78394917 24.99997996 0.901781661 1.00237796 0.166252287 0.09401811 412.8863896 458556.2259 0.050391538 0.02423675 1.64E-08 7.78394917 0.100596299 RSPTDSDVSLDS(ph)EDSGAK ddPTM_A459_MK2206_30min_R1 1 RSPTDSDVSLDSEDSGAK 18 1 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 RSPTDSDVS(0.004)LDS(0.996)EDSGAK 155.88 4.48E-05 6186800 1658.6 1701.4 1858.9 1837.1 1558.1 1678.4 1567.5 1688.8 1490.1 1398 TRUE FALSE 1517.52736 1590.638551 1732.723047 1978.59376 1496.037578 1773.429558 1462.934935 1674.035 1645.001227 1571.194794 0.965842915 1.012375141 1.102806001 1.259292462 0.952165564 1.128713998 0.931097112 1.065453504 1.046974718 1 10.61764634 -7.24164845 24.98877637 1.016335771 1.072283058 0.094724531 0.089061261 2282.038098 2881391.781 0.034940078 0.027022994 5.73E-08 7.24164845 0.055947287 RSPTS(ph)SPTPQR ddPTM_A459_MK2206_30min_R2 1 RSPTSSPTPQR 11 1 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 1 RS(0.002)PT(0.082)S(0.433)S(0.242)PT(0.242)PQR 69.314 0.035662 2610500 3397.2 4314.9 2329.1 4433.1 3538.8 3536.9 2451.2 3553.7 4884.1 3471.4 TRUE FALSE 3657.292244 4100.62834 2406.751032 4070.901549 3399.848931 3671.499208 2129.354496 4018.180792 5308.91019 3358.128502 1.089086448 1.221105249 0.716694144 1.212253059 1.012423714 1.093317068 0.634089641 1.196553613 1.580913353 1 11.71344172 -7.992440297 24.9990018 1.323215692 1.000833719 0.22983201 0.222667176 211.3958929 699060.2831 0.116540972 0.055819388 1.02E-08 7.992440297 -0.322381973 RSPVS(ph)PQLQQQHQAAAAAFLQQR ddPTM_A459_MK2206_30min_R2 1 RSPVSPQLQQQHQAAAAAFLQQR 23 1 A0A5K1VW61;A0A5K1VW79;A0A5K1VW71;A0A5K1VW93;Q7Z5Q1-7;Q7Z5Q1-5;Q7Z5Q1-4;Q7Z5Q1-6;Q7Z5Q1-3;Q7Z5Q1;Q7Z5Q1-8;Q7Z5Q1-9 A0A5K1VW61 CPEB2 Cytoplasmic polyadenylation element-binding protein 2 1 RS(0.259)PVS(0.741)PQLQQQHQAAAAAFLQQR 94.73 4.22E-05 3993900 4262.2 3975.8 5010.4 4300.6 3793.1 6243 3946.4 1273.4 4076.2 4462.8 TRUE FALSE 4588.517309 3778.367553 5177.444235 3949.227223 3644.163835 6480.58174 3428.23294 1439.837752 4430.740508 4317.179201 1.062850786 0.875193588 1.199265537 0.914770279 0.844107614 1.501114834 0.794090951 0.333513548 1.026304515 1 12.07587326 -7.500835105 24.99174836 0.720705833 1.055018791 0.211842939 0.252522092 969.9912221 1099721.398 0.102511257 0.068439733 3.16E-08 7.500835105 0.334312958 RSQANGAGALSYVS(ph)PNTSK ddPTM_A459_MK2206_30min_R2 2 RSQANGAGALSYVSPNTSK 19 1 O95453;O95453-3;O95453-2;A0A494C0W0;A0A494C0K5;A0A494C0Q6;A0A494C002;A0A494C1N1;A0A494C0Q2;F5H1Z4;A0A494C1K5;A0A494C0P9;A0A494BZU6;A0A494C1G3;A0A494C156;A0A494BZW7 O95453 PARN Poly(A)-specific ribonuclease PARN 1 RSQANGAGALSYVS(0.977)PNT(0.017)S(0.006)K;RSQANGAGALSYVS(0.99)PNT(0.005)S(0.005)K 123.54 0.00033303 10391000 65838 74229 64974 76285 80961 61913 91073 61579 69682 63550 TRUE FALSE 70878.6079 70542.8958 67140.20073 70052.27148 77782.06434 64269.1426 79115.0057 69627.58673 75742.8144 61476.3687 1.152940705 1.147479874 1.092130231 1.139499176 1.265235179 1.045428413 1.286917353 1.132591078 1.232063897 1 15.90774433 -6.020439494 24.69948556 1.170744494 1.129730123 0.015841629 0.086467169 2256.979388 2727377.608 0.023569011 0.030814335 9.54E-07 6.020439494 -0.041014371 RSQS(ph)FNSIDK ddPTM_A459_MK2206_30min_R2 1 RSQSFNSIDK 10 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 RS(0.001)QS(0.989)FNS(0.011)IDK 107.46 0.020245 4800800 13316 15527 16056 14820 19232 11327 21237 10546 16652 13422 TRUE FALSE 14335.4832 14755.95176 16591.29903 13609.15859 18476.85505 11758.05692 18448.55639 11924.39841 18100.36086 12984.04124 1.104084848 1.136468337 1.277822422 1.048145053 1.423043466 0.905577601 1.420863971 0.918388827 1.394046778 1 13.66445187 -10.58500465 8.853648559 0.999999999 1.1769304 0.079089816 0.184769953 2.89E-09 2.66E-10 0.158111058 0.038347564 2.60E-11 10.58500465 0.176930401 RSQS(ph)IEQESQEK ddPTM_A459_MK2206_30min_R1 1 RSQSIEQESQEK 12 1 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 RS(0.005)QS(0.995)IEQESQEK 115.58 0.0026802 10035000 2833 3207.2 2852 2781.5 3016.7 2788.1 3083.2 3506.3 2585.9 2430.2 TRUE FALSE 2592.038473 2998.410697 2658.414186 2995.731612 2896.538451 2945.959813 2877.525354 3475.644789 2854.713559 2731.271523 0.949022626 1.097807622 0.973324755 1.096826729 1.060509154 1.078603789 1.053547891 1.272537263 1.045195813 1 11.41535703 -5.92038459 0.733131939 1.108870286 0.997115128 0.140443703 0.078624423 1.600630432 1.627282176 0.040756109 0.116237905 1.20E-06 5.92038459 -0.111755158 RSQS(ph)IEQESQEK ddPTM_A459_MK2206_30min_R2 2 RSQSIEQESQEK 12 1 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 RS(0.056)QS(0.944)IEQESQEK;RS(0.122)QS(0.878)IEQESQEK 81.651 0.019423 36690000 104476 139650 127925 116472 146481 119388 143018 105195 104512 124388 TRUE FALSE 112474.7629 132715.1841 132189.9557 106955.865 140729.4199 123931.394 124239.5648 118944.3477 113602.2648 120329.2297 0.934725196 1.102933879 1.098568951 0.888860215 1.169536448 1.029935904 1.032496967 0.988490892 0.944095338 1 16.87662761 -7.799618781 3.069112626 0.970277828 1.041670594 0.110101937 0.077377338 0.531809911 10.09963842 0.046392046 0.020798098 1.59E-08 7.799618781 0.071392766 RSQS(ph)TTFNPDDMSEPEFK ddPTM_A459_MK2206_30min_R1 1 RSQSTTFNPDDMSEPEFK 18 1 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 RS(0.172)QS(0.484)T(0.172)T(0.172)FNPDDMSEPEFK 102.16 0.0012156 4117400 2104.3 2114.5 1701.1 1580.4 1550.6 1787.5 1616.5 1468.7 1383.5 1631.9 TRUE FALSE 1925.318235 1976.845666 1585.634072 1702.122682 1488.836319 1888.706705 1508.666234 1455.859311 1527.319776 1834.072092 1.049750576 1.077845126 0.864542936 0.928056585 0.811765429 1.029788694 0.82257739 0.793785215 0.832747951 1 10.84083463 -5.261201652 24.99995063 0.879848779 1.063797866 0.468808024 0.0757707 16.77271754 1763623.35 0.01947394 0.045313151 5.48E-06 5.261201652 0.183949087 RSQSIEQES(ph)QEK ddPTM_A459_MK2206_30min_R1 1 RSQSIEQESQEK 12 1 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 RSQS(0.329)IEQES(0.671)QEK 160.46 0.00084938 7077800 2177.7 2016.7 1976 1888.2 1897.3 1911.4 1913.5 1611.8 1403.3 1442.5 TRUE FALSE 1992.475179 1885.412463 1841.874625 2033.629491 1821.726523 2019.621816 1785.853906 1597.708203 1549.178057 1621.20779 1.229006665 1.162967804 1.136112617 1.254391635 1.123684783 1.245751364 1.101557689 0.985504888 0.955570326 1 10.6628533 -7.614786729 3.070859628 0.975465544 1.187738633 0.829192635 0.042898387 0.094377035 1.779845332 0.021958786 0.011537238 2.43E-08 7.614786729 0.21227309 RSQST(ph)TFNPDDMSEPEFK ddPTM_A459_MK2206_30min_R2 1 RSQSTTFNPDDMSEPEFK 18 1 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 RS(0.193)QS(0.268)T(0.376)T(0.162)FNPDDMSEPEFK 75.3 0.019408 6349800 34401 44148 41827 47026 39049 40981 51967 41786 49880 47343 TRUE FALSE 37034.76701 41955.67452 43221.4913 43183.82537 37515.74005 42540.56067 45143.67048 47247.57367 54218.47224 45798.20179 0.808651117 0.916098731 0.943737737 0.942915304 0.819153124 0.928869672 0.985708362 1.031646917 1.183855918 1 15.48300333 -7.580438347 1.802104436 1.090488285 0.894283899 0.638058752 0.061219464 0.228073747 1.451981957 0.039673613 0.018733985 2.63E-08 7.580438347 -0.196204387 RSQSTT(ph)FNPDDMSEPEFK ddPTM_A459_MK2206_30min_R2 1 RSQSTTFNPDDMSEPEFK 18 1 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 RS(0.052)QS(0.288)T(0.155)T(0.505)FNPDDMSEPEFK 130.17 0.00074192 7517600 34312 39840 30707 35241 33458 29391 38769 29180 40100 38569 TRUE FALSE 36938.9531 37861.60353 31730.75605 32361.69757 32144.27081 30509.4951 33678.58373 32993.92619 43587.82552 37310.49669 0.990041848 1.014770826 0.850451183 0.867361746 0.861534251 0.817718814 0.902657073 0.884306807 1.168245652 1 15.18729395 -8.24713493 24.64067425 1.084122822 0.896034042 0.536679575 0.068915891 446.5000824 769139.5146 0.049422338 0.018475481 5.66E-09 8.24713493 -0.18808878 RSRS(ph)PLELEPEAK ddPTM_A459_MK2206_30min_R1 2 RSRSPLELEPEAK 13 2 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 RS(0.261)RS(0.739)PLELEPEAK;RS(0.001)RS(0.999)PLELEPEAK 99.915 0.012835 26940000 2632.3 2979.5 2377 3297.1 3097.5 2659.7 2664.6 3296 1654.19 1302.7 TRUE FALSE 2408.409062 2785.534008 2215.655863 3551.043213 2974.120016 2810.289916 2486.849396 3267.183419 1826.14897 1464.088311 1.644988929 1.902572398 1.513334849 2.425429659 2.031380207 1.919481151 1.69856516 2.231548053 1.247294276 1 10.51578686 -8.421970536 4.830097271 1.008055617 1.91769278 0.611889083 0.257079012 0.133905263 4.591847156 0.245537684 0.064015031 3.78E-09 8.421970536 0.909637163 RSS(ph)DGSLSHEEDLAK ddPTM_A459_MK2206_30min_R2 1 RSSDGSLSHEEDLAK 15 1 A0A2R8Y7R9;Q13136-2;Q13136;H0YEF9;E9PJZ7 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 RS(0.212)S(0.783)DGS(0.005)LSHEEDLAK 77.372 0.017971 18592000 30535 53266 36170 62992 56999 50956 55679 40656 49758 47064 TRUE FALSE 32872.78308 50620.8879 37375.88975 57845.3521 54760.93286 52895.16629 48368.28042 45969.87879 54085.8609 45528.30553 0.722029575 1.111855302 0.820937421 1.27053602 1.202788732 1.161808367 1.062378225 1.009698873 1.187961209 1 15.47447615 -4.212908484 1.083515224 1.112594513 1.08E-10 0.4293717 0.124446811 5.067709858 2.074679759 0.038363321 8.72093536 6.12E-05 4.212908484 -1.112594513 RSS(ph)DPALIGLSTSVSDSNFSSEEPSR ddPTM_A459_MK2206_30min_R1 2 RSSDPALIGLSTSVSDSNFSSEEPSR 26 1 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RS(0.253)S(0.747)DPALIGLSTSVSDSNFSSEEPSR;RS(0.391)S(0.609)DPALIGLSTSVSDSNFSSEEPSR 146 5.37E-11 9090700 1926.15 2196.2 2272.06 1897.64 1873.7 2164.9 2544.9 2108.5 1653.32 1302.39 TRUE FALSE 1762.320828 2053.226981 2117.838898 2043.796562 1799.066561 2287.474767 2375.134364 2090.065607 1825.18853 1463.739906 1.203984957 1.402726654 1.446868319 1.396283967 1.229088962 1.562760404 1.622647818 1.427894121 1.246935008 1 10.51544351 -8.565423843 2.906591358 1.001142841 1.417061146 0.526061566 0.120992908 0.232591012 4.980891168 0.123841264 0.033093866 2.72E-09 8.565423843 0.415918305 RSS(ph)DPALIGLSTSVSDSNFSSEEPSR ddPTM_A459_MK2206_30min_R2 1 RSSDPALIGLSTSVSDSNFSSEEPSR 26 1 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RS(0.264)S(0.736)DPALIGLSTSVSDSNFSSEEPSR 111.33 9.12E-09 22465000 11491 12835 15985 17677 17509 16221 16937 15794 16589 14902 TRUE FALSE 12370.7598 12197.63256 16517.93192 16232.73255 16821.50868 16838.30152 14713.15156 17858.33003 18031.88123 14415.74896 0.85814201 0.846132421 1.145825442 1.126041567 1.16688413 1.168049025 1.020630395 1.238806952 1.250845952 1 13.81535817 -5.262122977 24.24050097 1.145416526 0.852137177 0.694796113 0.076141606 19.54597622 693157.3788 0.019517934 0.044984713 5.47E-06 5.262122977 -0.293279349 RSS(ph)DPALIGLSTSVSDSNFSSEEPSRK ddPTM_A459_MK2206_30min_R1 1 RSSDPALIGLSTSVSDSNFSSEEPSRK 27 2 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RS(0.289)S(0.711)DPALIGLSTSVSDSNFSSEEPSRK 63.462 0.00076901 4257200 891.93 1099 960.23 1028 1297.2 1098.8 938.94 960.89 904.85 685.46 TRUE FALSE 816.0666698 1027.4549 895.052263 1107.176738 1245.529777 1161.013106 876.3050258 952.48904 998.9123955 770.3799598 1.059304126 1.333698894 1.161832225 1.437182684 1.616773335 1.507065561 1.137497172 1.236388652 1.296648988 1 9.589426364 -8.933326309 0.811930976 1.001545144 1.336159538 0.246244098 0.163833673 2.122400175 2.429619856 0.180694438 0.060903422 1.17E-09 8.933326309 0.334614395 RSS(ph)DPLGDTASNLGSAVDELMR ddPTM_A459_MK2206_30min_R1 1 RSSDPLGDTASNLGSAVDELMR 22 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 RS(0.263)S(0.737)DPLGDTASNLGSAVDELMR 97.366 9.46E-05 2270600 266.42 337.75 504.24 409.91 385.97 397.79 367.54 250.44 259.46 488.86 TRUE FALSE 243.75958 315.7624136 470.0135937 441.4813392 370.5959976 420.312526 343.0220772 248.2504295 286.4317955 549.4236675 0.443664142 0.574715711 0.855466594 0.80353535 0.674517716 0.765006225 0.624330726 0.451837888 0.521331374 1 9.101775248 -7.503649557 23.25706503 0.599567686 0.693678751 0 0.175684118 1013.927659 1226321.142 0.074865286 0.049481345 3.14E-08 7.503649557 0.094111064 RSS(ph)DSWEVWGSASTNR ddPTM_A459_MK2206_30min_R1 1 RSSDSWEVWGSASTNR 16 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 RS(0.001)S(0.999)DSWEVWGSASTNR 214.81 1.69E-08 11487000 2274.2 1911.1 1802.2 1424.1 1267.7 1347.6 1652.3 1547.4 1079.4 1061.7 TRUE FALSE 2080.767348 1786.687043 1679.871685 1533.784429 1217.204825 1423.899947 1542.078082 1533.871245 1191.607493 1193.231411 1.743808726 1.497351667 1.407833945 1.285404 1.020091168 1.193314167 1.292354582 1.285476757 0.998639058 1 10.22065815 -1.522878778 0.430959412 1.121770746 13.98743981 0.780290575 0.105955269 40.26862117 0.505135236 0.073999969 450.133444 0.029999998 1.522878778 12.86566906 RSS(ph)DSWEVWGSASTNR ddPTM_A459_MK2206_30min_R2 2 RSSDSWEVWGSASTNR 16 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 RS(0.003)S(0.995)DS(0.002)WEVWGSASTNR;RS(0.014)S(0.972)DS(0.014)WEVWGSASTNR 173.51 8.02E-06 7752800 34537 32584 29421.8 37213 34512 28467 30165.3 21530.1 25964.1 25021.3 TRUE FALSE 37181.17927 30965.92594 30402.70813 34172.57886 33156.88547 29550.33163 26204.55987 24344.15799 28222.41049 24204.85703 1.536104065 1.279326951 1.256058158 1.411806681 1.369844301 1.220843056 1.082615768 1.005755083 1.165981293 1 14.56300895 -7.047430973 2.39500035 1.061124339 1.362021695 0.750214498 0.083395583 0.156620297 1.783531829 0.035837009 0.027526021 8.97E-08 7.047430973 0.300897356 RSS(ph)FSEGQTLTVTSGAK ddPTM_A459_MK2206_30min_R2 1 RSSFSEGQTLTVTSGAK 17 1 E9PEM3;H0Y6E6;Q92622-3;Q92622-2;Q92622;H7C357;H7C3H3 E9PEM3 KIAA0226 Run domain Beclin-1 interacting and cysteine-rich containing protein 1 RSS(0.998)FS(0.002)EGQTLTVTSGAK 160.76 0.00010855 0 13646 16228 12516 13750 16528 9888.4 13140 11792 13500 14518 TRUE FALSE 14690.74825 15422.14112 12933.27719 12626.58102 15879.02767 10264.70999 11414.70222 13333.25489 14674.2056 14044.27885 1.046030801 1.098108439 0.920892937 0.899055135 1.130640302 0.730881956 0.812765279 0.949372697 1.044852908 1 13.77769493 -6.745569262 24.99974486 0.898484715 1.01123547 0.21067275 0.106545073 414.6568328 653195.994 0.037094485 0.03697685 1.80E-07 6.745569262 0.112750755 RSS(ph)GENVENNSQR ddPTM_A459_MK2206_30min_R2 1 RSSGENVENNSQR 13 1 Q9NVW2-2;Q9NVW2 Q9NVW2-2 RLIM E3 ubiquitin-protein ligase RLIM 1 RS(0.128)S(0.872)GENVENNSQR 115.09 0.007311 1808600 5858.3 5576.7 3716 6012.4 5781.3 6885.9 6085 5707.3 3837.6 5281.5 TRUE FALSE 6306.815952 5299.769187 3839.889585 5521.167687 5554.297113 7147.94775 5286.032191 6453.263706 4171.387511 5109.165088 1.234412246 1.037306311 0.7515689 1.080639907 1.087124221 1.399044194 1.034617614 1.263075981 0.816451894 1 12.31887184 -4.755989714 24.39549619 1.063298679 1.234412617 0.08318281 0.178078108 387.6591597 1735106.463 0.045328923 0.378348392 1.75E-05 4.755989714 0.171113938 RSS(ph)GFISELPSEEGK ddPTM_A459_MK2206_30min_R2 2 RSSGFISELPSEEGK 15 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 RS(0.094)S(0.906)GFISELPSEEGK;RS(0.029)S(0.971)GFISELPSEEGK 137.69 0.00071941 36482000 111893 151144 156978 152632 158302 122944 171423 112176 139239 150710 TRUE FALSE 120459.6141 143638.4087 162211.5682 140161.4774 152086.2681 127622.7201 148914.9542 126837.7884 151349.7565 145792.345 0.826241008 0.985225999 1.112620612 0.961377481 1.043170463 0.875373258 1.021418197 0.869989356 1.038118678 1 17.15355545 RSS(ph)GREEDDEELLR ddPTM_A459_MK2206_30min_R1 1 RSSGREEDDEELLR 14 2 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 RS(0.236)S(0.764)GREEDDEELLR 94.547 0.014834 9326000 1238.1 1352.1 1074.5 1299.1 1382.1 1346.2 1214.8 1189.2 958.49 957.67 TRUE FALSE 1132.793093 1264.078044 1001.565934 1399.156907 1327.04803 1422.420681 1133.762909 1178.80295 1058.128465 1076.31339 1.052475147 1.174451657 0.930552331 1.299953081 1.232956909 1.321567393 1.0533762 1.095222787 0.983104434 1 10.07188249 -7.798719098 2.008423932 1.004842506 1.164917895 0.251598885 0.111816679 0.516056043 4.04070978 0.085408687 0.033996875 1.59E-08 7.798719098 0.160075389 RSS(ph)ITEPEGPNGPNIQK ddPTM_A459_MK2206_30min_R1 1 RSSITEPEGPNGPNIQK 17 1 Q13625-2;Q13625;Q13625-3 Q13625-2 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 RS(0.034)S(0.966)ITEPEGPNGPNIQK 204.81 2.66E-08 9008600 2949.7 2768 3078.5 3203.7 3670.7 3446.5 3278.5 2755.1 2591.1 2312.5 TRUE FALSE 2698.812526 2587.802697 2869.539997 3450.449529 3524.488246 3641.637852 3059.797247 2731.012451 2860.454117 2598.989958 1.038408216 0.995695535 1.104098147 1.32761172 1.356099216 1.401174268 1.177302451 1.050797616 1.10060222 1 11.34373534 -7.705942025 5.013289999 1.056139936 1.208685062 0.223223832 0.127944251 0.360454434 18.61628909 0.075365843 0.041103847 1.97E-08 7.705942025 0.152545125 RSS(ph)LLNAK ddPTM_A459_MK2206_30min_R2 1 RSSLLNAK 8 1 E9PCH4;Q8TEU7;A0A5F9ZHG7;Q8TEU7-4;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RE77 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 RS(0.009)S(0.991)LLNAK 93.178 0.043865 36347000 45868 85632 70852 95037 95403 78019 104570 74045 75668 86445 TRUE FALSE 49379.68935 81379.6394 73214.17032 87272.17309 91656.99886 80988.06772 90839.83339 83722.93573 82249.46586 83624.30673 0.590494454 0.973157717 0.875513032 1.043622082 1.096056905 0.968475206 1.08628504 1.00117943 0.983559315 1 16.35163472 -4.400908758 1.415681246 1.018496489 1.51E-13 0.805628172 0.06064036 1.315360642 1.176310753 0.017015745 2.474671869 3.97E-05 4.400908758 -1.018496489 RSS(ph)LLSLMTGK ddPTM_A459_MK2206_30min_R1 1 RSSLLSLMTGK 11 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 RS(0.005)S(0.995)LLSLMTGK 105.65 0.02078 14748000 3908.8 4637 3960.8 3368.4 4212.9 3955.1 4114 3963.9 3387.6 3748 TRUE FALSE 3576.336034 4335.130457 3691.951931 3627.834752 4045.091272 4179.034344 3839.562566 3929.24404 3739.753143 4212.330536 0.849016003 1.029152489 0.876463017 0.861241709 0.960297687 0.992095542 0.911505527 0.932795754 0.887810942 1 12.04040293 RSS(ph)LNSISSSDAK ddPTM_A459_MK2206_30min_R2 2 RSSLNSISSSDAK 13 1 Q14123;A0A0A0MS69;Q14123-2;Q14123-3 Q14123 PDE1C "Calcium/calmodulin-dependent 3,5-cyclic nucleotide phosphodiesterase 1C" 1 RS(0.12)S(0.88)LNSISSSDAK;RS(0.012)S(0.887)LNS(0.084)IS(0.017)SSDAK 142.4 0.0028361 7182800 32619 33809 34793 34081 33871 30836 40740 36939 36810 40113 TRUE FALSE 35116.33572 32130.09422 35952.98125 31296.47328 32541.05435 32009.48559 35390.78906 41767.05413 40011.66726 38804.1161 0.904964196 0.828007373 0.926524938 0.806524576 0.838598005 0.824899233 0.912036985 1.076356282 1.031119152 1 15.24392207 -7.611252694 4.303568188 1.039145563 0.854778731 0.810876612 0.038964364 0.084686078 2.885732451 0.019045036 0.010562757 2.45E-08 7.611252694 -0.184366832 RSS(ph)LPLDHGSPAQENPESEK ddPTM_A459_MK2206_30min_R1 1 RSSLPLDHGSPAQENPESEK 20 1 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5;A0A0A0MRX3 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 RS(0.149)S(0.851)LPLDHGSPAQENPESEK 167.04 1.62E-09 4649800 2102.2 1487.2 1363.5 1421.7 3224 2656.8 2644.5 2690.8 1392.2 1544.4 TRUE FALSE 1923.396851 1390.38301 1270.949419 1531.19958 3095.581253 2807.22572 2468.09023 2667.274619 1536.924172 1735.731932 1.108118607 0.801035566 0.732226789 0.882163629 1.783444319 1.617315248 1.421930533 1.536685804 0.885461714 1 10.76132844 -6.185342762 10.11120699 1.415344576 0.863470994 0.441061135 0.269370859 0.488274524 62.90865474 0.079526949 0.102731466 6.53E-07 6.185342762 -0.551873583 RSS(ph)LPNGEGLQLK ddPTM_A459_MK2206_30min_R1 2 RSSLPNGEGLQLK 13 1 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 RS(0.011)S(0.989)LPNGEGLQLK;RS(0.014)S(0.986)LPNGEGLQLK 120.54 0.0054136 33723000 9964.6 9646.7 9459.2 8199 8983 7414.1 8044.9 8704.9 7381.4 6898.5 TRUE FALSE 9117.058444 9018.698077 8817.135859 8830.488401 8625.188088 7833.879935 7508.2394 8628.793977 8148.722945 7753.138261 1.175918465 1.163231942 1.137234441 1.138956653 1.112477012 1.010414063 0.968412938 1.1129421 1.051022524 1 12.92056468 -6.58402148 3.453459692 1.032110751 1.151765379 0.719474482 0.037095876 0.144764933 3.52042026 0.013658955 0.013944041 2.61E-07 6.58402148 0.119654628 RSS(ph)LPNGEGLQLK ddPTM_A459_MK2206_30min_R2 2 RSSLPNGEGLQLK 13 1 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 RS(0.003)S(0.997)LPNGEGLQLK;RS(0.151)S(0.849)LPNGEGLQLK 127.91 0.00096468 17360900 102139 132507 104860 113888 108710 108752 111846 80710 103981 112897 TRUE FALSE 109958.8404 125926.8951 108355.9801 104582.9861 104441.4992 112890.6336 97160.48585 91259.07412 113025.0794 109213.1801 1.006827566 1.153037526 0.99215113 0.957604073 0.956308561 1.033672249 0.889640662 0.835604952 1.03490329 1 16.73678745 -5.468316019 5.616001717 0.953002849 1.080039234 0.341682586 0.066326527 0.214572019 14.83804109 0.017601297 0.036592498 3.40E-06 5.468316019 0.127036385 RSS(ph)LPSFETLDYGDEEDIETQLSSSGK ddPTM_A459_MK2206_30min_R1 2 RSSLPSFETLDYGDEEDIETQLSSSGK 27 1 K7EQI2;A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EPU8 K7EQI2 CEP89 Centrosomal protein of 89 kDa 1 RS(0.178)S(0.72)LPS(0.036)FET(0.063)LDY(0.003)GDEEDIETQLSSSGK;RS(0.055)S(0.731)LPS(0.055)FET(0.155)LDY(0.004)GDEEDIETQLSSSGK 121.44 4.05E-12 28389000 6686.9 6060.8 6393.5 5588.2 6355.7 5779.7 5405.3 5710.7 4963.2 4953 TRUE FALSE 6118.144041 5666.240818 5959.527033 6018.604132 6102.539011 6106.941619 5044.7223 5660.771952 5479.142401 5566.615033 1.099077986 1.017897014 1.070583649 1.0811964 1.096274661 1.097065557 0.906245945 1.016914573 0.984286208 1 12.4425846 -7.241542402 24.98055486 0.978271223 1.07510171 0.6666166 0.034676759 502.1350086 630429.0154 0.013233559 0.010236185 5.73E-08 7.241542402 0.096830487 RSS(ph)LPSFETLDYGDEEDIETQLSSSGK ddPTM_A459_MK2206_30min_R2 1 RSSLPSFETLDYGDEEDIETQLSSSGK 27 1 K7EQI2;A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EPU8 K7EQI2 CEP89 Centrosomal protein of 89 kDa 1 RS(0.136)S(0.416)LPS(0.136)FET(0.136)LDY(0.175)GDEEDIETQLSSSGK 63.893 0.00080167 5428200 29954 33939 34801 33578 30992 26844 36884 24600 31273 29809 TRUE FALSE 32247.30127 32253.63861 35961.24797 30834.56999 29775.09836 27865.56723 32041.08649 27815.30446 33993.06901 28836.33477 1.118287103 1.118506872 1.247081096 1.069295742 1.032554886 0.966335266 1.11113589 0.96459223 1.178827659 1 14.81560018 -5.977184553 21.64692655 1.041102337 1.15720948 0.371168893 0.069403952 52.15933035 49485.6774 0.018573026 0.027542973 1.05E-06 5.977184553 0.116107143 RSS(ph)LYGIAK ddPTM_A459_MK2206_30min_R2 2 RSSLYGIAK 9 1 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 RS(0.158)S(0.842)LYGIAK;RS(0.005)S(0.995)LYGIAK 138.2 0.0012767 35914000 281510 383450 337170 378720 291400 329310 325870 242330 343670 295690 TRUE FALSE 303062.622 364408.4306 348411.0795 347777.3645 279958.1718 341842.1228 283082.8776 274003.363 373561.7954 286041.6595 1.059505187 1.273969782 1.218043134 1.21582767 0.978732162 1.195078099 0.989656115 0.957914185 1.305969893 1 18.12586575 -6.237235932 24.54695041 1.071234982 1.199575036 0.211425842 0.113721094 939.9902191 953330.0894 0.032381681 0.041783128 5.79E-07 6.237235932 0.128340054 RSS(ph)PPGHYYQK ddPTM_A459_MK2206_30min_R1 1 RSSPPGHYYQK 11 1 D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;D6RDK6;D6RBN5;Q9NX40-3;Q9NX40-2;Q9NX40-4;Q9NX40 D6RI08 OCIAD1 OCIA domain-containing protein 1 1 RS(0.457)S(0.538)PPGHY(0.001)Y(0.004)QK 69.721 0.035068 13730000 2658 2025.3 2298.9 1949.5 3371.7 2684.1 2660.4 2657.6 1966.9 2175.6 TRUE FALSE 2431.923142 1893.452602 2142.857073 2099.650828 3237.398049 2836.071422 2482.92957 2634.364883 2171.366294 2445.129753 0.99459881 0.774377147 0.876377653 0.858707324 1.324018918 1.159885858 1.015459228 1.077392674 0.888037247 1 11.25569531 RSS(ph)PPPPPSGSSSR ddPTM_A459_MK2206_30min_R1 2 RSSPPPPPSGSSSR 14 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RS(0.041)S(0.959)PPPPPSGSSSR;RS(0.03)S(0.97)PPPPPSGSSSR 140.77 0.00028736 45224000 1804.49 1823.5 1827.94 1430.94 2131.36 1934.46 2063.64 1761.93 1668.42 1361.65 TRUE FALSE 1651.00865 1704.789819 1703.864526 1541.151247 2046.463418 2043.987453 1925.978341 1746.525632 1841.858229 1530.341482 1.078849831 1.113993078 1.113388447 1.007063629 1.337259326 1.335641409 1.258528481 1.141265301 1.203560285 1 10.5796379 -6.253434841 24.9576191 1.228209981 1.08337618 0.311744804 0.096063262 703.5807304 2193716.779 0.028791431 0.036515493 5.58E-07 6.253434841 -0.144833801 RSS(ph)PPPPPSGSSSR ddPTM_A459_MK2206_30min_R2 1 RSSPPPPPSGSSSR 14 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RS(0.234)S(0.766)PPPPPSGSSSR 123.68 0.002861 6629800 12340 18186 17370 17578 17695 19127 15271 13880 15374 15537 TRUE FALSE 13284.75989 17282.90968 17949.10713 16141.82117 17000.20539 19854.89139 13265.89936 15694.16366 16711.20273 15030.02896 0.88388119 1.149891975 1.194216403 1.073971395 1.131082677 1.321014846 0.882626334 1.044187187 1.111854327 1 13.87556017 -10.55698179 4.617742088 0.999996764 1.093387347 0.04083714 0.125716422 14244016.82 32577278.14 255.6900012 0.030371866 2.77E-11 10.55698179 0.093390583 RSS(ph)PSARPPDVPGQQPQAAK ddPTM_A459_MK2206_30min_R1 2 RSSPSARPPDVPGQQPQAAK 20 2 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RS(0.136)S(0.522)PS(0.342)ARPPDVPGQQPQAAK;RS(0.114)S(0.464)PS(0.422)ARPPDVPGQQPQAAK 88.976 0.0021504 39964000 2613.2 2743.6 2643.92 2269.13 2670.9 2307.7 2804.4 2477.5 2107.14 2246.35 TRUE FALSE 2390.933618 2564.991141 2464.458077 2443.898786 2564.512397 2438.35998 2617.323593 2455.839479 2326.184743 2524.644797 0.947037627 1.015980998 0.976160321 0.968016882 1.01579137 0.965822987 1.036709638 0.972746535 0.921390901 1 11.30186471 -4.724739633 24.02692401 0.986034578 0.947037078 0.122239526 0.03119499 8619.271787 5642370.286 0.00761687 1.706358888 1.88E-05 4.724739633 -0.0389975 RSS(ph)PSARPPDVPGQQPQAAK ddPTM_A459_MK2206_30min_R2 1 RSSPSARPPDVPGQQPQAAK 20 2 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RS(0.032)S(0.946)PS(0.022)ARPPDVPGQQPQAAK 83.905 0.0030809 8103100 3555.6 7187.5 6103.6 5953.7 5357.2 6037.7 5527.8 5783.1 5167.9 4824.3 TRUE FALSE 3827.81947 6830.579202 6307.090978 5467.263665 5146.84941 6267.468904 4801.99322 6538.971026 5617.394601 4666.883486 0.820208921 1.463627541 1.351456705 1.17150207 1.102845063 1.342966655 1.028950741 1.401142978 1.20367149 1 12.18824373 -8.572241426 21.02952122 0.999999997 1.222320771 0.102255338 0.183679272 10517.17315 4480526.876 0.167912608 0.043354849 2.68E-09 8.572241426 0.222320774 RSS(ph)PSSSSTQPQEESR ddPTM_A459_MK2206_30min_R1 1 RSSPSSSSTQPQEESR 16 1 Q4G0A6 Q4G0A6 FAM188B Protein FAM188B 1 RS(0.357)S(0.641)PS(0.002)SSSTQPQEESR 161.55 2.36E-05 2488400 398.55 297.61 516.69 309.51 370.47 310.5 377.28 327.49 191.35 278.91 TRUE FALSE 364.6512296 278.2355349 481.6185224 333.3485138 355.7133954 328.0802417 352.1123396 324.6267895 211.2415173 313.4634765 1.163297344 0.887617078 1.536442229 1.063436537 1.134784184 1.046629883 1.123296224 1.035612803 0.673895152 1 8.292153545 -8.048232228 5.232697486 0.836372405 1.133085109 0.325970361 0.170249125 0.23446949 14.66618215 0.112858305 0.042636922 8.95E-09 8.048232228 0.296712703 RSS(ph)PSSSSTQPQEESR ddPTM_A459_MK2206_30min_R2 2 RSSPSSSSTQPQEESR 16 1 Q4G0A6 Q4G0A6 FAM188B Protein FAM188B 1 RS(0.218)S(0.684)PS(0.041)S(0.037)S(0.007)S(0.007)T(0.007)QPQEESR;RS(0.064)S(0.927)PS(0.008)S(0.001)SSTQPQEESR 105.92 0.0018398 6428300 14573.8 15313.9 12364.2 13545.8 16075.5 15179.1 14243.2 13504.2 11935.4 14297.6 TRUE FALSE 15689.58133 14553.43399 12776.41626 12439.06481 15444.2951 15756.75129 12373.05073 15269.24531 12973.51952 13831.07048 1.134372162 1.052227592 0.923747462 0.899356621 1.116637726 1.139228616 0.894583738 1.103981454 0.937998222 1 13.7556252 -7.582867605 0.005783239 5.27E-05 2.030136145 0.029543227 0.094180162 22044.75118 105.217285 18373.99954 18550.72531 2.61E-08 7.582867605 2.030083441 RSS(ph)SSGDQSSDSLNSPTLLAL ddPTM_A459_MK2206_30min_R2 2 RSSSSGDQSSDSLNSPTLLAL 21 1 P15408;P15408-3;P15408-2 P15408 FOSL2 Fos-related antigen 2 1 RS(0.13)S(0.523)S(0.13)S(0.13)GDQS(0.023)S(0.023)DS(0.023)LNS(0.019)PTLLAL;RS(0.053)S(0.624)S(0.217)S(0.077)GDQS(0.01)S(0.01)DS(0.009)LNSPTLLAL 66.264 0.016939 22868300 16613.9 20993.4 20128.9 27073.8 26323.6 20864.3 19102.7 12094.2 19605 19878.6 TRUE FALSE 17885.87296 19950.89828 20799.98748 24861.78394 25290.0032 21658.30556 16594.49254 13674.95347 21310.20746 19229.96291 0.930104392 1.037490211 1.081644701 1.292866973 1.315135308 1.126279112 0.862949795 0.711127397 1.108177252 1 14.23106836 -7.252850612 19.84205174 0.896490855 1.13989568 0.336439967 0.142547147 41.91082499 96824.85296 0.058848273 0.044542951 5.59E-08 7.252850612 0.243404825 RSS(ph)TGSYEER ddPTM_A459_MK2206_30min_R2 1 RSSTGSYEER 10 1 Q7Z674;F8W6C0;G3V0F5;Q9UHY8;Q9UHY8-2;H7C434 Q7Z674 DKFZp779C2259;FEZ2 Fasciculation and elongation protein zeta-2 1 RS(0.043)S(0.827)T(0.129)GS(0.001)YEER 87.831 0.016994 5546400 14390 14679 12166 14658 14292 13339 15358 9653.7 15120 15680 TRUE FALSE 15491.70946 13950.06221 12571.60837 13460.39451 13730.82427 13846.62499 13341.47615 10915.47174 16435.11027 15168.36288 1.021317171 0.919681465 0.828804563 0.887399294 0.905227833 0.912862192 0.8795594 0.719620952 1.083512466 1 13.88877776 -8.298803535 24.98557527 1.041756318 0.885231722 0.418932508 0.074164916 635.8120205 425164.9175 0.07134679 0.018423358 5.03E-09 8.298803535 -0.156524597 RSS(ph)TSGDTEEEEEEEVVPFSSDEQK ddPTM_A459_MK2206_30min_R2 1 RSSTSGDTEEEEEEEVVPFSSDEQK 25 1 O15231-3;O15231-2;H7BZT5;O15231-4;O15231-7;O15231;O15231-8;O15231-6;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.1)S(0.243)T(0.243)S(0.243)GDT(0.171)EEEEEEEVVPFSSDEQK 55.631 0.0065482 3688700 9173.5 9097.1 10934 8540.6 10308 7305 10369 7082 6970.1 9229.5 TRUE FALSE 9875.830213 8645.351242 11298.5341 7842.80566 9903.256126 7582.996894 9007.537845 8007.641716 7576.346699 8928.342171 1.106121386 0.968304202 1.265468313 0.878416789 1.109193167 0.84931746 1.008870143 0.896878901 0.848572619 1 13.1241766 -6.411290783 1.153612938 0.919479055 1.084172375 0.267052441 0.110077455 0.626957554 1.744109679 0.046293529 0.058865259 3.88E-07 6.411290783 0.16469332 RSS(ph)TSSEPTPTVK ddPTM_A459_MK2206_30min_R1 4 RSSTSSEPTPTVK 13 1 F8WAN1;Q69YQ0-2;Q69YQ0;A0A494C1J1 F8WAN1 SPECC1L-ADORA2A;SPECC1L Cytospin-A 1 RS(0.003)S(0.959)T(0.037)SSEPTPTVK;RSS(1)TSSEPTPTVK;RS(0.002)S(0.906)T(0.084)S(0.007)SEPTPTVK;RSS(0.911)T(0.088)S(0.001)SEPTPTVK 276.75 4.19E-48 77813000 30905.4 30065 25356.3 21291.2 22564.2 17449.8 18456.6 17090.7 14206.1 12511.2 TRUE FALSE 28276.73344 28107.76304 23635.185 22931.05191 21665.42013 18437.7926 17225.39389 16941.27781 15682.87493 14061.18191 2.010978424 1.998961625 1.680881817 1.630805437 1.540796518 1.311254823 1.225031722 1.204826018 1.115331203 1 13.77943024 -5.634034272 0.355454214 0.991391629 2.472141566 0.980196037 0.047722298 0.437976398 0.069394816 0.049289514 0.264595124 2.32E-06 5.634034272 1.480749937 up RSS(ph)TSSEPTPTVK ddPTM_A459_MK2206_30min_R2 3 RSSTSSEPTPTVK 13 1 F8WAN1;Q69YQ0-2;Q69YQ0;A0A494C1J1 F8WAN1 SPECC1L-ADORA2A;SPECC1L Cytospin-A 1 RS(0.001)S(0.497)T(0.497)S(0.004)S(0.001)EPTPTVK;RS(0.028)S(0.971)TSSEPTPTVK;RS(0.017)S(0.864)T(0.117)S(0.003)SEPTPTVK 145.52 0.0011223 45825600 108229 154749 122620 124973 109412 85804 93768 60471 88168 89929 TRUE FALSE 116515.0955 147064.3897 126708.0896 114762.3061 105115.9351 89069.33135 81456.14896 68374.76733 95836.69327 86994.62409 1.339336731 1.690499743 1.456504823 1.319188482 1.208303803 1.023848683 0.936335432 0.785965432 1.10163926 1 16.40863863 -6.366502004 1.206202071 0.936453258 1.522918856 0.810294124 0.111879088 0.1778382 0.53506097 0.046508776 0.061154911 4.30E-07 6.366502004 0.586465598 RSSAWAEGGS(ph)PR ddPTM_A459_MK2206_30min_R2 1 RSSAWAEGGSPR 12 1 Q8N9B5-2;Q8N9B5 Q8N9B5-2 JMY Junction-mediating and -regulatory protein 1 RSSAWAEGGS(1)PR 63.062 0.044094 2850200 11515 14310 12646 13965 11151 15480 11356 11400 10903 13493 TRUE FALSE 12396.59725 13599.38621 13067.61133 12824.01483 10713.15571 16069.10225 9864.943559 12890.01914 11851.32323 13052.72452 0.949732544 1.041881041 1.001140514 0.982478012 0.820760118 1.23109181 0.755776585 0.987534758 0.907957815 1 13.67206335 RSSDT(ph)SGSPATPLK ddPTM_A459_MK2206_30min_R2 1 RSSDTSGSPATPLK 14 1 Q7Z5R6 Q7Z5R6 APBB1IP Amyloid beta A4 precursor protein-binding family B member 1-interacting protein 1 RS(0.208)S(0.208)DT(0.38)S(0.182)GS(0.023)PATPLK 117.2 0.0031702 5764800 51207 63794 58287 64344 51604 61807 55449 43546 57792 51963 TRUE FALSE 55127.44729 60626.08273 60230.25949 59086.88937 49577.76767 64159.1087 48168.47969 49237.61172 62818.6437 50267.45157 1.096682755 1.206070346 1.198196002 1.175450267 0.986279712 1.276354912 0.958243917 0.97951279 1.249688252 1 15.61733693 -6.47218861 1.029899134 1.065366256 1.173600082 0.117939587 0.109546207 1.107916388 2.514250734 0.053270834 0.06530573 3.37E-07 6.47218861 0.108233826 RSSPS(ph)ARPPDVPGQQPQAAK ddPTM_A459_MK2206_30min_R1 1 RSSPSARPPDVPGQQPQAAK 20 2 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RS(0.017)S(0.357)PS(0.625)ARPPDVPGQQPQAAK 97.776 0.0010363 24268000 1144.6 1123.6 1211.3 936.9 1320.6 1227.1 1196.3 1088.9 929.03 956.34 TRUE FALSE 1047.245759 1050.453436 1129.080331 1009.0602 1267.997706 1296.577342 1116.49701 1079.379862 1025.605993 1074.818619 0.9743465 0.977330888 1.050484529 0.938819055 1.179731801 1.206321996 1.038777139 1.004243733 0.954213087 1 10.0698775 -1.577444601 18.32692594 1.038014315 0.0051746 0 0.08703526 0 0 0.021587209 0 0.026457902 1.577444601 -1.032839714 RSSPS(ph)ARPPDVPGQQPQAAK ddPTM_A459_MK2206_30min_R2 1 RSSPSARPPDVPGQQPQAAK 20 2 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RS(0.301)S(0.301)PS(0.398)ARPPDVPGQQPQAAK 48.255 0.034256 113730000 25971 25434 25630 33686 31078 31013 31693 24016 25762 28280 TRUE FALSE 27959.35973 24170.98454 26484.49141 30933.74604 29857.72157 32193.22145 27531.67103 27154.97366 28002.73219 27357.22592 1.022010046 0.883532001 0.968098574 1.13073402 1.091401652 1.176772146 1.006376564 0.99260699 1.023595458 1 14.73963432 -5.618442148 7.177952582 1.063538091 0.946279455 0.344621059 0.064613943 0.234418185 15.03893071 0.018556387 0.032305869 2.41E-06 5.618442148 -0.117258637 RSSSSGDQSSDSLNS(ph)PTLLAL ddPTM_A459_MK2206_30min_R1 2 RSSSSGDQSSDSLNSPTLLAL 21 1 P15408;P15408-3;P15408-2 P15408 FOSL2 Fos-related antigen 2 1 RSSSSGDQSSDSLNS(0.998)PT(0.002)LLAL;RSSSSGDQSSDSLNS(0.961)PT(0.038)LLAL 91.401 0.0011952 11012700 1396.43 1925.02 1537.85 1290.01 1674.33 1392.44 1353.43 1241.41 1157.32 1065.44 TRUE FALSE 1277.656296 1799.700848 1433.465027 1389.366794 1607.637891 1471.278749 1263.145154 1230.556483 1277.627556 1197.434751 1.066994502 1.502963604 1.197113267 1.160286014 1.342568261 1.228692209 1.054875978 1.027660574 1.066970501 1 10.22573133 -7.244447027 3.878198324 1.036397156 1.26153006 0.476097836 0.109362287 0.19392374 6.657429284 0.04436892 0.031642902 5.70E-08 7.244447027 0.225132903 RSSSSGDQSSDSLNS(ph)PTLLAL ddPTM_A459_MK2206_30min_R2 2 RSSSSGDQSSDSLNSPTLLAL 21 1 P15408;P15408-3;P15408-2 P15408 FOSL2 Fos-related antigen 2 1 RSSSSGDQSSDS(0.006)LNS(0.986)PT(0.008)LLAL;RSSSSGDQSSDS(0.001)LNS(0.978)PT(0.02)LLAL 61.096 0.033072 6579800 17595.9 16704.8 18247.5 21747.7 22584 26162 30064 23451 21345 18731.5 TRUE FALSE 18943.05563 15875.26392 18855.86254 19970.84334 21697.23868 27157.61324 26116.56069 26516.12622 23201.54952 18120.29269 1.04540561 0.876104166 1.040593707 1.10212587 1.197400012 1.498740319 1.441288015 1.463338737 1.280418033 1 14.14531864 -6.259886557 1.830027802 1.369566632 0.979356307 0.522768824 0.142715036 0.240985496 1.589672092 0.04833694 0.063867206 5.50E-07 6.259886557 -0.390210325 RSST(ph)SSEPTPTVK ddPTM_A459_MK2206_30min_R2 1 RSSTSSEPTPTVK 13 1 F8WAN1;Q69YQ0-2;Q69YQ0;A0A494C1J1 F8WAN1 SPECC1L-ADORA2A;SPECC1L Cytospin-A 1 RS(0.002)S(0.321)T(0.619)S(0.054)S(0.005)EPTPTVK 188 0.018543 28154000 72304 84065 63667 73394 62700 51725 53700 39233 42339 42328 TRUE FALSE 77839.64983 79890.45434 65789.626 67397.47542 60238.08296 53693.43112 46649.12549 44360.88781 46021.56969 40946.84083 1.900992806 1.951077366 1.606708226 1.645974978 1.47112895 1.311296062 1.139260674 1.083377543 1.123934564 1 15.32146453 -6.219915976 0.511062302 0.999885693 2.058847819 0.965316405 0.060914118 0.212671553 0.107007276 0.049502133 0.114167237 6.03E-07 6.219915976 1.058962126 RSSTS(ph)GDTEEEEEEEVVPFSSDEQK ddPTM_A459_MK2206_30min_R1 2 RSSTSGDTEEEEEEEVVPFSSDEQK 25 1 O15231-3;O15231-2;H7BZT5;O15231-4;O15231-7;O15231;O15231-8;O15231-6;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.077)S(0.227)T(0.148)S(0.481)GDT(0.067)EEEEEEEVVPFSSDEQK;RS(0.121)S(0.121)T(0.121)S(0.557)GDT(0.08)EEEEEEEVVPFSSDEQK 130.83 3.03E-08 7874600 2154.96 2392.77 2467.67 1708.02 2274.37 1955.42 1995.62 1962.25 2187.17 1982.24 TRUE FALSE 1971.669336 2237.000238 2300.171436 1839.571996 2183.777027 2066.134191 1862.495831 1945.094255 2414.534148 2227.814856 0.885023875 1.004123045 1.032478722 0.825729298 0.980232725 0.927426345 0.836019127 0.873095109 1.083812751 1 11.12141363 -8.263867943 24.9993765 1.04190638 0.9232798 0.33660666 0.068077679 269.1559591 2770575.506 0.058178907 0.01772562 5.45E-09 8.263867943 -0.118626581 RST(ph)GVVNIPAAECLDEYEDDEAGQK ddPTM_A459_MK2206_30min_R2 1 RSTGVVNIPAAECLDEYEDDEAGQK 25 1 Q96IZ0;H0YI16 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 RS(0.231)T(0.769)GVVNIPAAECLDEYEDDEAGQK 73.11 0.00069279 2184900 3882.8 6325.8 4447 7530.8 5800.9 5419.7 5823.9 4328.2 5024.9 8447.5 TRUE FALSE 4180.070153 6011.669971 4595.26076 6915.50955 5573.127519 5625.950481 5059.214934 4893.910601 5461.956719 8171.858767 0.511520117 0.735655148 0.562327482 0.846259064 0.681990191 0.688454199 0.619102101 0.598873615 0.668386089 1 12.99644856 -8.60587709 19.50195657 1 0.660424816 0.573486817 0.088733588 9256.267454 2174924.077 0.083205904 0.021483538 2.48E-09 8.60587709 -0.339575184 RST(ph)QGVTLTDLQEAEK ddPTM_A459_MK2206_30min_R1 1 RSTQGVTLTDLQEAEK 16 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RS(0.009)T(0.991)QGVTLTDLQEAEK 256.33 4.11E-29 11759000 2660.8 2687.5 1653.1 1722.1 1914.4 1429.8 2171.7 2164.4 1768.7 1125.5 TRUE FALSE 2434.484988 2512.543262 1540.892178 1854.73644 1838.145394 1510.75404 2026.829855 2145.476879 1952.562694 1264.935437 1.924592288 1.986301583 1.218158755 1.46626965 1.453153529 1.194332925 1.602318819 1.696115719 1.543606604 1 10.30484804 -5.249216781 24.7488266 1.426216381 1.955447044 0.551450207 0.200147559 511.5642339 1035831.472 0.051027413 0.13282318 5.63E-06 5.249216781 0.529230663 RST(ph)QGVTLTDLQEAEK ddPTM_A459_MK2206_30min_R2 1 RSTQGVTLTDLQEAEK 16 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RS(0.225)T(0.775)QGVTLTDLQEAEK 158.02 8.99E-05 12803000 50374 41993 56053 22905 53848 43927 21905 18267 50720 39807 TRUE FALSE 54230.67217 39907.68868 57921.77904 21033.58823 51733.65696 45598.67277 19028.84719 20654.55962 55131.53392 38508.10085 1.408292566 1.036345283 1.504145304 0.546212038 1.343448672 1.184131956 0.494151796 0.53636921 1.43168665 1 15.23287435 -7.20464775 24.95764464 0.82691511 1.158994684 0.153024644 0.34602521 485.3763228 213303.3675 0.129573032 0.100366794 6.24E-08 7.20464775 0.332079575 RSTAPSAAASASASAAAS(ph)SPAGGGAEALELLEHCGVCR ddPTM_A459_MK2206_30min_R2 1 RSTAPSAAASASASAAASSPAGGGAEALELLEHCGVCR 38 1 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 RSTAPSAAASAS(0.001)AS(0.003)AAAS(0.498)S(0.498)PAGGGAEALELLEHCGVCR 54.273 0.00024655 11711000 2023.1 2371.4 1494.9 2628.4 2925.1 6178.6 2618.9 0 5202.6 1232.6 TRUE FALSE 2177.990091 2253.639724 1544.73922 2413.651312 2810.245877 6413.730953 2275.035284 0 5655.112744 1192.380363 1.826590037 1.890034249 1.295508772 2.024229338 2.356836764 5.378930375 1.907977819 0 4.742708719 1 10.21962881 -6.19810083 3.689149929 2.625126839 1.702634896 0.06709828 1.497173151 0.722219268 19.64772146 0.468303241 0.606572841 6.34E-07 6.19810083 -0.922491943 RSTS(ph)PIIGSPPVR ddPTM_A459_MK2206_30min_R1 1 RSTSPIIGSPPVR 13 1 Q86TB9-4;Q86TB9;Q86TB9-2 Q86TB9-4 PATL1 Protein PAT1 homolog 1 1 RS(0.002)T(0.002)S(0.994)PIIGS(0.002)PPVR 90.476 0.037843 13683000 4869.7 5445 5646.4 4647 5255.7 3670.3 3219.6 2894.1 2860.7 2752.5 TRUE FALSE 4455.506443 5090.52951 5263.1381 5004.912745 5046.35434 3878.109214 3004.826358 2868.797189 3158.080002 3093.50048 1.440279861 1.645556399 1.701353574 1.617880061 1.631276404 1.25363136 0.971335346 0.927362775 1.020875873 1 11.59502454 -6.967528703 2.577916556 0.973583758 1.618390591 0.947535636 0.069607099 0.059292044 0.797393457 0.029366755 0.023974488 1.08E-07 6.967528703 0.644806833 RSVS(ph)GSPESDELQELR ddPTM_A459_MK2206_30min_R1 1 RSVSGSPESDELQELR 16 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 RS(0.021)VS(0.883)GS(0.096)PESDELQELR 98.169 0.01023 0 1733.8 1941.5 2149.2 2295.1 1580.8 1390.4 2000.1 1550.9 1536.8 1731.4 TRUE FALSE 1586.331205 1815.107997 2003.318292 2471.869 1517.833389 1469.123246 1866.676978 1537.340645 1696.555859 1945.898903 0.815217688 0.932786382 1.029507899 1.270296723 0.78001657 0.754984364 0.959287749 0.790041375 0.871862283 1 10.92622104 RSVSDNDIR ddPTM_A459_MK2206_30min_R1 1 RSVSDNDIR 9 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 120.27 0.008973 8788700 4306.5 4218.9 4012.6 3717.6 4640.4 4068.3 4300.2 4299.3 2211.8 2923 FALSE TRUE 3940.209561 3944.248843 3740.235892 4003.930196 4455.563042 4298.64363 4013.341504 4261.711673 2441.724525 3285.123308 1.199409943 1.200639512 1.138537443 1.218806669 1.356284871 1.308518198 1.221671496 1.297276015 0.743267237 1 11.68173181 -8.254470202 24.99664847 0.871633609 1.242263029 0.762296257 0.082870478 226.8050445 813498.7367 0.059630641 0.02145141 5.57E-09 8.254470202 0.37062942 RSVSDNDIR ddPTM_A459_MK2206_30min_R2 3 RSVSDNDIR 9 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ;; 125.71 0.0067355 23231600 137919 211950 174735 203866 207399 234101 205468 149283 186062 169725 FALSE TRUE 148478.1847 201424.8712 180560.5777 187209.4957 199255.4732 243009.8776 178489.8048 168794.8007 202245.3364 164186.8871 0.904324257 1.226802424 1.099725933 1.140221968 1.213589444 1.480080912 1.087113642 1.028065052 1.231799567 1 17.32497938 -4.754560408 24.99242003 1.174093559 0.904323793 0.270339013 0.129295259 332.6838434 1208587.632 0.032919884 0.316902443 1.76E-05 4.754560408 -0.269769766 RSVSGS(ph)PESDELQELR ddPTM_A459_MK2206_30min_R1 1 RSVSGSPESDELQELR 16 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 RS(0.273)VS(0.182)GS(0.522)PES(0.023)DELQELR 69.081 0.023691 1927000 831.86 775.01 1166.2 1216 1066 1068.3 1069.9 833.72 849.2 897.35 TRUE FALSE 761.1059387 724.5567081 1087.041593 1309.656531 1023.538963 1128.786223 998.5289231 826.4308739 937.4773789 1008.520493 0.75467573 0.718435286 1.077857714 1.298591888 1.014891586 1.119249664 0.990092844 0.819448767 0.929557095 1 9.978024684 -5.258570213 24.70290534 1.035405126 0.736555471 0.49722294 0.118458678 185.3219074 1595555.238 0.034249134 0.082726192 5.51E-06 5.258570213 -0.298849655 RSVVS(ph)FDK ddPTM_A459_MK2206_30min_R2 1 RSVVSFDK 8 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 RS(0.014)VVS(0.986)FDK 62.891 0.047134 2452000 14895 13956 15257 14791 15646 12613 16376 12491 9909.1 14874 TRUE FALSE 16035.37265 13262.96533 15765.66077 13582.52799 15031.65943 13092.99655 14225.81153 14123.61659 10770.97561 14388.6626 1.11444497 0.921764983 1.095700219 0.94397432 1.044687741 0.909952295 0.988681987 0.981579524 0.748573784 1 13.81264488 -7.056295958 0.793238744 0.903627288 1.026707275 0.228522992 0.087403142 0.997303712 1.291955114 0.063175457 0.045605687 8.78E-08 7.056295958 0.123079987 RSY(ph)DVPPPPMEPDHPFYSNISK ddPTM_A459_MK2206_30min_R2 6 RSYDVPPPPMEPDHPFYSNISK 22 1 P18669;Q8N0Y7 P18669 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 1 RS(0.224)Y(0.776)DVPPPPMEPDHPFYSNISK;RS(0.056)Y(0.944)DVPPPPMEPDHPFYSNISK;RS(0.017)Y(0.983)DVPPPPMEPDHPFYSNISK;RS(0.321)Y(0.679)DVPPPPMEPDHPFYSNISK;RS(0.006)Y(0.994)DVPPPPMEPDHPFYSNISK;RS(0.211)Y(0.789)DVPPPPMEPDHPFYSNISK 118.32 5.25E-05 55983000 183195 238886 205874 237789 249616 235316 273161 191080 212670 227986 TRUE FALSE 197220.5501 227023.2686 212737.7364 218360.8781 239814.8216 244271.1153 237294.6326 216054.8121 231167.6522 220546.8355 0.894234323 1.029365341 0.964592105 0.990088466 1.0873646 1.107570257 1.075937599 0.979632338 1.04815674 1 17.75072553 -3.309860547 0.6848788 1.045807163 6.58E-16 0.445355389 0.045893548 19.85581846 1.434440783 0.020030451 25.26383819 0.000489936 3.309860547 -1.045807163 RSYS(ph)SPDITQAIQEEEK ddPTM_A459_MK2206_30min_R1 2 RSYSSPDITQAIQEEEK 17 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RS(0.351)Y(0.006)S(0.582)S(0.061)PDITQAIQEEEK;RS(0.043)Y(0.227)S(0.365)S(0.365)PDITQAIQEEEK 192.23 4.20E-08 24055900 8961.3 8681.1 10016.9 9022.3 8335.6 7619.2 7507.6 8332.4 8682.9 7421.5 TRUE FALSE 8199.094377 8115.958812 9336.980737 9717.199109 8003.575401 8050.59252 7006.781702 8259.550705 9585.518527 8340.931449 0.982995056 0.973027876 1.119417033 1.165001675 0.959554152 0.965191066 0.840047871 0.990243207 1.1492144 1 13.02599279 -6.377156651 19.87747737 0.975405174 1.058692229 0.147240039 0.088188947 8.992065363 1516.481927 0.029469596 0.033415301 4.20E-07 6.377156651 0.083287056 RSYS(ph)SPDITQAIQEEEK ddPTM_A459_MK2206_30min_R2 2 RSYSSPDITQAIQEEEK 17 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RS(0.088)Y(0.32)S(0.504)S(0.088)PDITQAIQEEEK;RS(0.035)Y(0.076)S(0.855)S(0.035)PDITQAIQEEEK 186.7 3.15E-08 14767200 96620 107572 103422 109172 105612 82209 119881 89687 86144 107372 TRUE FALSE 104017.3015 102230.1309 106870.0379 100252.2984 101465.1422 85337.5211 104140.4807 101409.3988 93636.64941 103868.4604 1.001432976 0.984226882 1.028897872 0.965185177 0.976861906 0.82159224 1.002618892 0.976325233 0.901492609 1 16.66439812 -6.138517757 2.56440846 0.941218345 1.001635538 0.195172403 0.051754425 0.466059802 5.977407915 0.016438917 0.022607336 7.27E-07 6.138517757 0.060417193 RSYS(ph)SPDITQAIQEEEKR ddPTM_A459_MK2206_30min_R1 4 RSYSSPDITQAIQEEEKR 18 2 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RS(0.231)Y(0.001)S(0.723)S(0.046)PDITQAIQEEEKR;RS(0.144)Y(0.276)S(0.488)S(0.092)PDITQAIQEEEKR;RS(0.02)YS(0.851)S(0.129)PDITQAIQEEEKR;RS(0.08)Y(0.26)S(0.579)S(0.08)PDIT(0.001)QAIQEEEKR 154.07 2.10E-05 39791000 6542.91 6984.35 7433.7 7552.09 6865.77 5885.35 6841.84 6891.6 5551.64 4913.72 TRUE FALSE 5986.401146 6529.667546 6929.121155 8133.75328 6592.291842 6218.573431 6385.433337 6831.347468 6128.752845 5522.46873 1.084008156 1.182381986 1.254714421 1.472847322 1.193721896 1.12604955 1.156264281 1.237009715 1.109784979 1 12.43109763 -6.518965958 24.85207054 1.144465033 1.255345069 0.218772133 0.106350035 272.5649034 1731214.178 0.03636288 0.037174787 3.03E-07 6.518965958 0.110880036 RSYS(ph)SPDITQAIQEEEKR ddPTM_A459_MK2206_30min_R2 2 RSYSSPDITQAIQEEEKR 18 2 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RS(0.124)Y(0.004)S(0.783)S(0.087)PDIT(0.003)QAIQEEEKR;RS(0.379)Y(0.011)S(0.548)S(0.062)PDIT(0.001)QAIQEEEKR 66.711 0.034932 11709900 15758 20407.8 17830.8 21113.7 19507.9 15268.5 22234 13292.8 22619.9 21152.8 TRUE FALSE 16964.4446 19394.37833 18425.26997 19388.64317 18741.92183 15849.55347 19314.64909 15030.2146 24587.33801 20462.58587 0.829046959 0.947797041 0.900437026 0.947516765 0.915911701 0.774562588 0.943900698 0.734521761 1.201575313 1 14.32070085 -8.268647819 24.98778627 1.100787655 0.880373647 0.53835281 0.083770406 450.8638953 1562881.471 0.070541044 0.019706418 5.39E-09 8.268647819 -0.220414007 RSYSS(ph)PDITQAIQEEEKR ddPTM_A459_MK2206_30min_R2 1 RSYSSPDITQAIQEEEKR 18 2 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RS(0.058)Y(0.007)S(0.382)S(0.553)PDITQAIQEEEKR 82.475 0.010812 13978000 12900 24625 25887 23413 23320 19261 24247 16519 21054 21034 TRUE FALSE 13887.63392 23402.15831 26750.05966 21500.08301 22404.33963 19993.99085 21063.33977 18678.09002 22885.23886 20347.6623 0.682517417 1.150115328 1.314650266 1.056636516 1.101076836 0.982618571 1.035172467 0.91794771 1.124710963 1 14.31257544 -6.759237792 24.94143909 1.008404331 1.079799513 0.016834516 0.155590236 219.3488604 2484980.362 0.053491907 0.051063158 1.74E-07 6.759237792 0.071395183 RT(ph)ADSSSSEDEEEYVVEK ddPTM_A459_MK2206_30min_R1 1 RTADSSSSEDEEEYVVEK 18 1 P45973;F8VNY3 P45973 CBX5 Chromobox protein homolog 5 1 RT(0.448)ADS(0.07)S(0.07)S(0.07)S(0.342)EDEEEYVVEK 95.624 0.0049372 6710400 3257.6 3127.9 3154 2641.6 3401.4 3032.3 2938 3055.3 2403.8 2258.4 TRUE FALSE 2980.524014 2924.273141 2939.915268 2845.05649 3265.915035 3203.986206 2742.011381 3028.587834 2653.683612 2538.187642 1.174272526 1.1521107 1.158273415 1.120900773 1.286711424 1.262312586 1.080302865 1.193208801 1.045503322 1 11.30958301 -8.373244906 3.125014258 0.999809716 1.178848608 0.541508264 0.057808572 0.196018671 3.484726161 0.057717904 0.015594114 4.23E-09 8.373244906 0.179038893 RT(ph)ASPPPPPK ddPTM_A459_MK2206_30min_R2 1 RTASPPPPPK 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.956)AS(0.044)PPPPPK 85.271 0.045803 24704000 123600 145770 126790 162650 155820 131370 152060 124250 102790 153670 TRUE FALSE 133062.911 138531.2738 131017.1153 149360.9747 149701.7239 136369.3774 132094.3393 140489.9016 111730.4884 148655.7605 0.895107668 0.931893075 0.8813457 1.004743941 1.007036144 0.917350104 0.888592133 0.945068668 0.751605508 1 17.18161584 -10.30715361 6.538549011 1.000000001 0.918948782 0.121088054 0.068469146 9.16E-10 2.28E-10 0.066717528 0.016181377 4.93E-11 10.30715361 -0.081051219 RT(ph)FSLTEVR ddPTM_A459_MK2206_30min_R2 2 RTFSLTEVR 9 1 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 RT(1)FSLTEVR;RT(0.988)FS(0.012)LT(0.001)EVR 117.14 0.0095198 10859500 21908 32076 26982 27171 30974 36033 43402 36514 46039 47549 TRUE FALSE 23585.29332 30483.15248 27881.56641 24951.04238 29757.80513 37404.26106 37703.26526 41286.50517 50043.389 45997.48002 0.512751858 0.662713533 0.606154215 0.542443681 0.646944248 0.813180658 0.819681105 0.897581893 1.087959362 1 15.4892672 -7.293745377 0.845919017 1.036129354 0.57739847 0.901552425 0.058265658 0.183081093 0.253614005 0.04749987 0.02747886 5.08E-08 7.293745377 -0.458730884 RT(ph)GSNISGASSDISLDEQYK ddPTM_A459_MK2206_30min_R1 2 RTGSNISGASSDISLDEQYK 20 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 RT(0.492)GS(0.492)NIS(0.015)GAS(0.001)SDISLDEQYK;RT(0.456)GS(0.456)NIS(0.066)GAS(0.014)S(0.007)DISLDEQYK 110.06 0.00048007 16758900 3635.9 4173.2 3707.9 3239.6 3181.4 3274.7 3585.5 3213.3 3499.2 3236.9 TRUE FALSE 3326.647612 3901.523921 3456.218079 3489.114553 3054.678101 3460.110684 3346.317837 3185.206457 3862.954362 3637.911609 0.914438824 1.072462539 0.95005554 0.959098221 0.839679033 0.951125551 0.919845834 0.875559057 1.061860423 1 11.82889477 -5.50136769 23.69975598 0.935264121 0.997902784 0.065961155 0.068191879 783.0154051 862681.2549 0.017051077 0.034904226 3.15E-06 5.50136769 0.062638663 RT(ph)GSNISGASSDISLDEQYK ddPTM_A459_MK2206_30min_R2 1 RTGSNISGASSDISLDEQYK 20 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 RT(0.452)GS(0.452)NIS(0.057)GAS(0.022)S(0.017)DISLDEQYK 61.04 0.034389 4954700 14834 18507 16296 14101 15173 11136 14899 11955 13833 13307 TRUE FALSE 15969.70245 17587.96929 16839.30051 12948.90319 14577.23178 11559.78828 12942.7434 13517.55955 15036.16934 12872.79368 1.24057783 1.366290001 1.308131003 1.005912432 1.132406232 0.898001519 1.005433919 1.050087486 1.168057976 1 13.65203756 -5.757231124 24.99930714 1.036067815 1.311128733 0.724900734 0.075590482 53.81018798 319656.1984 0.020973651 0.03473571 1.75E-06 5.757231124 0.275060918 RT(ph)PSDDEEDNLFAPPK ddPTM_A459_MK2206_30min_R1 1 RTPSDDEEDNLFAPPK 16 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 RT(0.515)PS(0.485)DDEEDNLFAPPK 80.859 0.028059 25685000 3441.3 4121.3 3502.1 3101.7 3446.6 3255.2 3790.3 3254.8 2631.4 2916.6 TRUE FALSE 3148.599364 3853.002621 3264.387209 3340.593471 3309.314624 3439.506611 3537.456003 3226.343627 2904.943447 3277.930427 0.960544903 1.175437584 0.995868363 1.019116649 1.009574394 1.049292133 1.079173607 0.984262387 0.886212661 1 11.67856952 -7.977033723 6.29038036 0.940158403 1.042500213 0.30802088 0.060077497 0.170028879 23.64672366 0.033178464 0.015097323 1.05E-08 7.977033723 0.10234181 RT(ph)PSDDEEDNLFAPPK ddPTM_A459_MK2206_30min_R2 3 RTPSDDEEDNLFAPPK 16 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 RT(0.75)PS(0.25)DDEEDNLFAPPK;RT(0.5)PS(0.5)DDEEDNLFAPPK;RT(0.647)PS(0.353)DDEEDNLFAPPK 113.23 0.0028807 82721700 220919 278023 249883 271630 270870 231445 281307 213212 222887 247777 TRUE FALSE 237832.7285 264216.7821 258213.9745 249436.9601 260234.2828 240252.8017 244371.053 241079.5405 242273.3084 239692.0568 0.992242846 1.102317639 1.077273807 1.040655929 1.085702573 1.002339439 1.019520865 1.005788609 1.010769033 1 17.87082257 -6.773214128 24.95143509 1.008785196 1.061934765 0.456753107 0.028262385 193.3128306 409639.5183 0.009549939 0.008488975 1.69E-07 6.773214128 0.053149569 RT(ph)PSEAER ddPTM_A459_MK2206_30min_R1 1 RTPSEAER 8 1 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 RT(0.999)PS(0.001)EAER 100.82 0.021882 4236100 1131.9 1278.5 822.49 1214.8 573.94 803.39 1470.4 1819.3 125.92 530.31 TRUE FALSE 1035.625961 1195.269418 766.6616704 1308.364106 551.0787545 848.8772475 1372.312299 1803.394052 139.0098346 596.0088064 1.737601777 2.005455968 1.286326078 2.195209353 0.924615121 1.424269639 2.302503393 3.025784237 0.233234531 1 9.219189837 -8.28974814 24.99379159 0.616616998 1.828122712 0.421208564 0.583160093 847.83574 748545.8357 0.575477366 0.148705718 5.13E-09 8.28974814 1.211505714 RT(ph)PTMPQEEAAACPPHILPPEK ddPTM_A459_MK2206_30min_R2 4 RTPTMPQEEAAACPPHILPPEK 22 1 Q9NYV4 Q9NYV4 CDK12 Cyclin-dependent kinase 12 1 RT(0.798)PT(0.202)MPQEEAAACPPHILPPEK;RT(0.5)PT(0.5)MPQEEAAACPPHILPPEK;RT(0.636)PT(0.364)MPQEEAAACPPHILPPEK;RT(0.581)PT(0.419)MPQEEAAACPPHILPPEK 70.538 0.0022385 50731100 260779 300421 283086 329588 324850 281230 316791 264827 267037 306952 TRUE FALSE 280744.4407 285502.53 292523.946 302659.6061 312094.7568 291932.4047 275195.9612 299440.7982 290263.3956 296936.1814 0.945470638 0.961494583 0.985140796 1.019274932 1.051049944 0.983148646 0.926784873 1.008434866 0.977527879 1 18.17979337 -5.207182517 2.804456374 0.994834596 0.948673601 0.233723091 0.030156524 0.455162867 6.88487138 0.008894585 0.030232647 6.21E-06 5.207182517 -0.046160995 RT(ph)PTMPQEEAAEK ddPTM_A459_MK2206_30min_R1 3 RTPTMPQEEAAEK 13 1 Q9NYV4-2 Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 RT(0.986)PT(0.014)MPQEEAAEK;RT(0.584)PT(0.416)MPQEEAAEK;RT(0.9)PT(0.1)MPQEEAAEK 180.7 0.00045253 163933000 21126.7 21925.5 21267.4 17979.4 18751 17933.6 19828 19382.3 19206.2 16936.3 TRUE FALSE 19329.76322 20498.14596 19823.82814 19364.1765 18004.10796 18948.98493 18505.3103 19212.84259 21202.75322 19034.49671 1.015512179 1.07689456 1.041468469 1.017320122 0.945867298 0.995507537 0.972198561 1.009369614 1.113911944 1 14.2163288 -5.813381655 3.979571364 1.002785213 1.048494063 0.131567125 0.043133771 0.394963364 12.82135845 0.012770226 0.020466947 1.54E-06 5.813381655 0.04570885 RT(ph)PTMPQEEAAEK ddPTM_A459_MK2206_30min_R2 2 RTPTMPQEEAAEK 13 1 Q9NYV4-2 Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 RT(0.914)PT(0.086)MPQEEAAEK;RT(0.941)PT(0.059)MPQEEAAEK 188.39 0.018928 39061000 41866.3 46776.7 48607.9 50175.5 49696 44106.4 53483.4 43891.6 40830.6 54310.4 TRUE FALSE 45071.61612 44453.8371 50228.46313 46076.00115 47744.68534 45784.89996 46460.96533 49628.38282 44381.97178 52538.2561 0.857881846 0.846123195 0.956035979 0.876999059 0.908760375 0.871458312 0.884326371 0.944614201 0.844755328 1 15.68108069 -11.14045009 3.16010758 1.00680123 0.89003475 0.459738174 0.036394487 52676682.87 94851164.68 3170412.638 0.008807356 7.24E-12 11.14045009 -0.11676648 RT(ph)SFSFQK ddPTM_A459_MK2206_30min_R2 1 RTSFSFQK 8 1 H0Y7F8;Q9BPZ7-4;Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7 H0Y7F8 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 RT(0.996)S(0.004)FSFQK 126.03 0.0061661 61903000 71437 107800 84526 106380 107260 84107 105930 95854 80891 91706 TRUE FALSE 76906.27165 102446.8088 87344.05465 97688.41371 103048.4335 87307.75082 92021.26376 108382.4469 87926.75296 88713.64073 0.866904695 1.154803342 0.984561719 1.101165648 1.16158499 0.984152495 1.037284267 1.221711182 0.991130025 1 16.43686833 -4.747389597 24.99109645 1.074988787 0.866904168 0.358537989 0.081601163 781.9475723 1390811.965 0.019385989 0.396657667 1.79E-05 4.747389597 -0.208084619 RT(ph)SFYLPK ddPTM_A459_MK2206_30min_R2 1 RTSFYLPK 8 1 Q9NS23-3;Q9NS23-4;Q9NS23-2;Q9NS23-5;Q9NS23 Q9NS23-3 RASSF1 Ras association domain-containing protein 1 1 RT(0.5)S(0.5)FYLPK 88.681 0.038352 5401600 25988 25652 26160 24629 31510 31299 30259 22689 26629 32117 TRUE FALSE 27977.66126 24378.15898 27032.16134 22616.73192 30272.75907 32490.10538 26285.95695 25654.5302 28945.14229 31069.02492 0.900500139 0.784645126 0.870067902 0.727951134 0.974371071 1.045739461 0.846050271 0.825726918 0.931639868 1 14.92318934 -6.27849005 24.9036636 0.929404971 0.821728986 0.361033872 0.07546689 991.4408493 1448063.154 0.02454092 0.02789752 5.27E-07 6.27849005 -0.107675985 RT(ph)SLGEVSKGDTMENLDGK ddPTM_A459_MK2206_30min_R2 3 RTSLGEVSKGDTMENLDGK 19 2 Q9ULJ8-3;Q9ULJ8;Q9ULJ8-4;Q9ULJ8-5 Q9ULJ8-3 PPP1R9A Neurabin-1 1 RT(0.495)S(0.495)LGEVS(0.01)KGDTMENLDGK;RT(0.499)S(0.499)LGEVS(0.001)KGDTMENLDGK;RT(0.499)S(0.499)LGEVS(0.001)KGDTMENLDGK 70.784 0.012108 31471900 169916 257722 214654 212691 249816 174804 226815 154622 176355 211681 TRUE FALSE 182924.8996 244923.9002 221810.4572 195313.4649 240006.9686 181456.2887 197033.918 174831.6263 191694.0391 204773.8663 0.893301977 1.196070107 1.083197096 0.953800739 1.172058588 0.88613011 0.962202461 0.853778998 0.936125506 1 17.64367208 -6.781795121 24.9998277 0.920668264 1.062686331 0.338406814 0.092003255 259.2823666 318434.4776 0.03090026 0.027281976 1.65E-07 6.781795121 0.142018067 RT(ph)SLPCIPR ddPTM_A459_MK2206_30min_R2 2 RTSLPCIPR 9 1 Q14432 Q14432 PDE3A "cGMP-inhibited 3,5-cyclic phosphodiesterase A" 1 RT(0.916)S(0.084)LPCIPR;RT(0.88)S(0.12)LPCIPR 122.33 0.0074635 9088000 17077.9 13550.2 12370.8 15093.3 15601.9 14866.4 14802 13090.3 12719.3 10352.2 TRUE FALSE 18385.39715 12877.31677 12783.2363 13860.12911 14989.29101 15432.15127 12858.47962 14801.24716 13825.60172 10014.40856 1.835894456 1.285878911 1.276484399 1.384018739 1.496772467 1.540994775 1.283997906 1.477995137 1.380570968 1 13.2897896 -12.61083546 0.318902744 2.02E-11 1.453654551 0.422612639 0.157120426 83.38513763 2.282896136 55.987127 0.142453722 2.45E-13 12.61083546 1.453654551 RT(ph)SMGGTQQQFVEGVR ddPTM_A459_MK2206_30min_R1 1 RTSMGGTQQQFVEGVR 16 1 A0A2R8Y6G0;A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222 A0A2R8Y6G0 CTNNB1 Catenin beta-1 1 RT(0.849)S(0.151)MGGTQQQFVEGVR 116.78 0.0023635 9026800 826.59 750.89 785.32 660.95 993.58 846.21 1114.6 833.73 905.51 921.99 TRUE FALSE 756.2841799 702.0069245 732.0146664 711.8564835 954.0036047 894.1216789 1040.247068 826.4407865 999.6410049 1036.213082 0.72985392 0.67747352 0.706432566 0.686978862 0.92066354 0.86287434 1.003893008 0.797558727 0.964706027 1 10.01710499 -6.26257115 24.93326034 0.915670657 0.699008756 0.771887694 0.059730161 44.74605167 985768.7027 0.017006524 0.020389903 5.46E-07 6.26257115 -0.2166619 RT(ph)SMGGTQQQFVEGVR ddPTM_A459_MK2206_30min_R2 2 RTSMGGTQQQFVEGVR 16 1 A0A2R8Y6G0;A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222 A0A2R8Y6G0 CTNNB1 Catenin beta-1 1 RT(0.5)S(0.5)MGGTQQQFVEGVR;RT(0.644)S(0.356)MGGTQQQFVEGVR 106.31 0.0043886 22451000 30296 30239 30754 27201 25531.9 29083 43275 21940.5 32312 36050 TRUE FALSE 32615.48505 28737.37523 31779.32301 24978.59129 24529.38932 30189.77394 37592.94052 24808.19868 35122.43935 34873.69145 0.935246132 0.824041678 0.91126926 0.716258883 0.703378057 0.865689082 1.077974225 0.71137289 1.007132824 1 15.08985146 -7.004461298 24.94120875 0.93174829 0.814560947 0.226626436 0.112392478 318.1751535 1778790.359 0.040180819 0.034577322 9.90E-08 7.004461298 -0.117187343 RT(ph)SPQVLGSILK ddPTM_A459_MK2206_30min_R2 1 RTSPQVLGSILK 12 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 RT(0.962)S(0.038)PQVLGSILK 92.781 0.026457 7759300 31329 50811 29753 44358 37016 37425 40704 27487 35220 35260 TRUE FALSE 33727.57233 48287.79963 30744.95017 40733.80951 35562.56585 38849.2346 35359.51591 31079.64528 38283.37194 34109.46909 0.988803791 1.415671393 0.901361147 1.194208253 1.042600979 1.13895747 1.036648088 0.911173528 1.122367863 1 15.05788468 -6.637442839 0.578812085 1.004801392 1.156953614 0.084523759 0.138378805 2.013261625 1.469905175 0.106621595 0.140929345 2.30E-07 6.637442839 0.152152223 RT(ph)SSEDNLYLAVLR ddPTM_A459_MK2206_30min_R2 1 RTSSEDNLYLAVLR 14 1 Q15149-4 Q15149-4 PLEC Plectin 1 RT(0.333)S(0.333)S(0.333)EDNLYLAVLR 80.905 0.041199 12162000 10796 13113 11907 9786.2 13262 12332 13230 11680 13336 11846 TRUE FALSE 11622.55006 12461.82749 12303.97344 8986.636155 12741.26724 12801.3029 11492.88511 13206.6161 14495.94117 11459.46599 1.014231385 1.087470175 1.073695183 0.784210727 1.111855234 1.117094192 1.002916289 1.152463484 1.264975278 1 13.4842522 -6.425590991 22.69962528 1.111088338 0.996002917 0.234427582 0.10443357 35.17643787 8200.10148 0.033249068 0.037700871 3.75E-07 6.425590991 -0.11508542 RT(ph)STPVIMEGVQEETDTR ddPTM_A459_MK2206_30min_R2 1 RTSTPVIMEGVQEETDTR 18 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RT(0.333)S(0.333)T(0.333)PVIMEGVQEETDTR 95.554 0.0049585 3836800 5016.2 7857.3 5730.4 9410.6 7981.5 7528.4 5475.1 6591.9 5980.3 7356.4 TRUE FALSE 5400.244129 7467.117908 5921.448676 8641.723877 7668.106206 7814.898537 4756.212793 7453.483963 6500.455684 7116.36127 0.75884907 1.049288762 0.832089385 1.214345864 1.07753189 1.098159332 0.66834898 1.047372903 0.913452175 1 12.79692404 -10.45709697 14.72203267 0.999911236 0.969572293 0.003072305 0.160531131 0 0 0.153726729 0.037284208 3.49E-11 10.45709697 -0.030338943 RT(ph)TLCGTLDYLPPEMIEGR ddPTM_A459_MK2206_30min_R1 2 RTTLCGTLDYLPPEMIEGR 19 1 A3KFJ0;O14965 A3KFJ0 AURKA Aurora kinase A 1 RT(0.897)T(0.101)LCGT(0.002)LDYLPPEMIEGR;RT(0.493)T(0.493)LCGT(0.012)LDY(0.001)LPPEMIEGR 130.98 0.00034524 10090400 2400.2 1973.17 2177.6 1563.11 2371.6 2204.7 2202.1 1914.76 1976.06 1513.02 TRUE FALSE 2196.050386 1844.716274 2029.790579 1683.501003 2277.13415 2329.528209 2055.201927 1898.019455 2181.478508 1700.46434 1.291441599 1.084830908 1.193668418 0.990024291 1.339124906 1.369936525 1.208612188 1.116177158 1.282872247 1 10.73171304 -3.485463202 15.66407595 1.192567753 44.84170966 0 0.129103524 0 0 0.02934544 0 0.000326992 3.485463202 43.64914191 RT(ph)VSVPSEGQFPEYPPEGATK ddPTM_A459_MK2206_30min_R1 1 RTVSVPSEGQFPEYPPEGATK 21 1 Q9UJF2-2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 RT(0.603)VS(0.387)VPS(0.01)EGQFPEYPPEGATK 76.198 0.0035768 4352700 898.93 952.66 1059.5 843.5 758.31 733.55 800.91 771.64 919.4 665.98 TRUE FALSE 822.471283 890.6416608 987.5840919 908.4665162 728.104907 775.0829671 747.4827552 764.8936328 1014.97492 748.4866303 1.098845657 1.189923273 1.319441192 1.2137378 0.972769422 1.035533483 0.998658794 1.021920235 1.356036139 1 9.547832736 -6.237060947 23.04508131 1.060543345 1.212514948 0.269045018 0.113797408 389.9530845 368623.7423 0.034125563 0.044023022 5.79E-07 6.237060947 0.151971603 RTADSSSS(ph)EDEEEYVVEK ddPTM_A459_MK2206_30min_R2 1 RTADSSSSEDEEEYVVEK 18 1 P45973;F8VNY3 P45973 CBX5 Chromobox protein homolog 5 1 RT(0.037)ADS(0.187)S(0.136)S(0.136)S(0.503)EDEEEYVVEK 73.11 0.0094961 10693000 19467 31439 23861 31370 31569 46531 29535 21917 35829 19863 TRUE FALSE 20957.40849 29877.78498 24656.51383 28806.97065 30329.44244 48301.76981 25657.01902 24781.62715 38945.34166 19214.87194 1.090686868 1.554930216 1.283199488 1.499201803 1.578435835 2.513770062 1.335268802 1.289710763 2.026833267 1 14.22993574 -6.059700496 2.909786401 1.666665879 1.336446104 0.09983954 0.40779265 0.619396287 10.3619679 0.125755961 0.179069091 8.72E-07 6.059700496 -0.330219775 RTAFYNEDDS(ph)EEEQR ddPTM_A459_MK2206_30min_R1 1 RTAFYNEDDSEEEQR 15 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 RTAFYNEDDS(1)EEEQR 179.07 1.02E-05 4458000 1122.9 1390.6 1263.5 1034.7 1479.1 1419.9 1387.7 1148.9 1053.4 904.43 TRUE FALSE 1027.391458 1300.071687 1177.73714 1114.392773 1420.184315 1500.293511 1295.129065 1138.855288 1162.9047 1016.477616 1.010736923 1.278996867 1.158645425 1.096327903 1.397162409 1.475972994 1.274134368 1.120393868 1.144053426 1 9.989362731 -8.337989111 1.577899797 1.015777962 1.245065224 0.229946955 0.131431819 0.57302571 2.861227905 0.133697489 0.039928486 4.59E-09 8.337989111 0.229287262 RTAFYNEDDS(ph)EEEQR ddPTM_A459_MK2206_30min_R2 2 RTAFYNEDDSEEEQR 15 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 RTAFYNEDDS(1)EEEQR;RTAFYNEDDS(1)EEEQR 127.49 0.0005401 18689300 30174 36737 33104 33196 32647 38562 34570 27493 32174 33248 TRUE FALSE 32484.14464 34912.694 34207.67084 30483.78061 31365.11474 40029.50393 30030.91747 31086.4295 34972.43636 32163.12048 1.009981126 1.085488394 1.063568159 0.947786787 0.975188796 1.244577744 0.933706588 0.966524051 1.087345874 1 14.97311976 -14.52287681 0.121344424 0.885880236 1.050598197 0.011072598 0.087761694 1047.819477 8.183193338 29.12676032 0.83861797 3.00E-15 14.52287681 0.164717961 RTAS(ph)PPPPPKR ddPTM_A459_MK2206_30min_R1 1 RTASPPPPPKR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.163)AS(0.837)PPPPPKR 64.534 0.032515 9438900 2244.9 1888.9 2499.8 1643.2 2001.5 1929.4 2007.7 2310.7 1462.8 1566.8 TRUE FALSE 2053.959467 1765.932267 2330.120541 1769.759549 1921.776017 2038.640961 1873.769996 2290.497794 1614.863295 1760.907013 1.166421311 1.002853787 1.323250191 1.005027259 1.091355763 1.157722098 1.064093665 1.300748862 0.917063356 1 10.78210301 -8.293529524 24.99469974 0.9585316 1.132624081 0.321270803 0.104564077 879.1702241 684769.409 0.093973399 0.024271653 5.09E-09 8.293529524 0.174092481 RTAS(ph)PPPPPKR ddPTM_A459_MK2206_30min_R2 1 RTASPPPPPKR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.4)AS(0.6)PPPPPKR 59.57 0.03899 10179000 8486.5 10212 9894.7 9185.7 9689.4 8479.7 9320.3 7089.1 8292.9 7883.9 TRUE FALSE 9136.232965 9704.88693 10224.58436 8435.198926 9308.945471 8802.400926 8096.533414 8015.669711 9014.201452 7626.648989 1.197935421 1.272496865 1.340639169 1.106016409 1.220581344 1.154163636 1.061610863 1.05100808 1.181934748 1 12.89683359 -6.638414276 0.800582578 1.06867632 1.263011755 0.528951096 0.068963636 0.514613968 0.730149332 0.044098336 0.048341306 2.30E-07 6.638414276 0.194335435 RTDALTS(ph)SPGR ddPTM_A459_MK2206_30min_R1 5 RTDALTSSPGR 11 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RTDALT(0.098)S(0.878)S(0.024)PGR;RTDALT(0.004)S(0.498)S(0.498)PGR;RT(0.002)DALT(0.121)S(0.66)S(0.218)PGR;RTDALT(0.001)S(0.499)S(0.499)PGR;RTDALT(0.011)S(0.494)S(0.494)PGR 136.83 0.00071025 1176841800 13823.5 13223.2 14457.7 10023.1 12646.4 12982.6 15308.2 10882.3 13058.6 13823.1 TRUE FALSE 12647.73873 12362.36728 13476.35161 10795.0809 12142.66711 13717.66359 14287.01791 10787.1572 14416.0882 15535.60999 0.814112786 0.795743926 0.867449145 0.694860447 0.781602211 0.882981975 0.919630315 0.694350412 0.927938344 1 13.92329127 -6.758494877 24.90421516 0.868042746 0.789964383 0.229260771 0.083539697 135.2943821 1144301.554 0.027789606 0.026645929 1.74E-07 6.758494877 -0.078078363 RTDALTS(ph)SPGR ddPTM_A459_MK2206_30min_R2 2 RTDALTSSPGR 11 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RTDALT(0.002)S(0.499)S(0.499)PGR;RTDALT(0.022)S(0.74)S(0.237)PGR 100.04 0.014437 114252000 64996 64436 62686 78078 66238 62254 70794 60925 57283 67729 TRUE FALSE 69972.14373 61236.20194 64775.91995 71698.77764 63637.1633 64623.11959 61498.66276 68888.10669 62265.3718 65519.00828 1.067967077 0.934632613 0.988658431 1.094320252 0.971277878 0.986326278 0.938638486 1.051421694 0.950340572 1 15.9996259 RTDALTSS(ph)PGR ddPTM_A459_MK2206_30min_R1 2 RTDALTSSPGR 11 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RTDALT(0.025)S(0.139)S(0.835)PGR;RT(0.001)DALT(0.057)S(0.16)S(0.782)PGR 71.513 0.032447 22532000 3707.94 4306.83 4419.1 3294.55 3548.63 3420.29 4246.6 3605.11 3847.53 4068.82 TRUE FALSE 3392.560232 4026.454584 4119.143804 3548.296812 3407.280553 3613.943864 3963.317062 3573.590903 4247.494512 4572.89614 0.741884383 0.880504272 0.900773531 0.775940827 0.74510342 0.790296511 0.866697371 0.781472134 0.928841238 1 12.15889244 -8.455012259 3.592725671 0.999077428 0.813801818 0.588838215 0.052937603 0.154862711 3.966127039 0.053374109 0.014098568 3.51E-09 8.455012259 -0.18527561 RTDALTSS(ph)PGR ddPTM_A459_MK2206_30min_R2 3 RTDALTSSPGR 11 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RTDALT(0.014)S(0.108)S(0.877)PGR;RTDALTS(0.003)S(0.997)PGR;RTDALT(0.003)S(0.205)S(0.792)PGR 145.81 0.0012485 413247000 1705271 1917312 1733303 1988392 1804658 2115122 2069636 1468875 1723540 1807559 TRUE FALSE 1835827.859 1822101.074 1791090.457 1825934.013 1733798.059 2195614.45 1797890.307 1660862.006 1873450.394 1748578.498 1.049897309 1.042047055 1.024312297 1.044239086 0.991547169 1.255656782 1.028201084 0.949835542 1.071413377 1 20.73775113 -10.61843051 4.214569269 0.999992256 1.050214356 0.038811824 0.075783734 5.62E-06 1.21E-06 0.074724422 0.01812054 2.41E-11 10.61843051 0.050222101 RTDALTSSPGR ddPTM_A459_MK2206_30min_R1 1 RTDALTSSPGR 11 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 0 170.4 0.00049438 849120 504.39 525.91 392.86 361.79 370.12 613.19 512.56 472.93 522.32 388.32 FALSE TRUE 461.4889818 491.6731634 366.1937578 389.6551285 355.3773367 647.9082879 478.3680576 468.7952229 576.6170331 436.4280133 1.057422915 1.126584794 0.83907024 0.89282795 0.814286265 1.484570807 1.096098424 1.074163914 1.321219114 1 8.769599898 -6.735030844 24.99989725 1.193651524 0.947169996 0.393860534 0.154546034 242.596513 229655.8149 0.051555258 0.051540505 1.84E-07 6.735030844 -0.246481528 RTDEAAFQK ddPTM_A459_MK2206_30min_R1 2 RTDEAAFQK 9 1 P26447 P26447 S100A4 Protein S100-A4 0 ; 140.17 0.0014375 5683000 6250.7 6323.5 5931.6 5477.8 6470.4 5242 6149.6 5781 3556 5306.5 FALSE TRUE 5719.045141 5911.839001 5528.979518 5899.701105 6212.670267 5538.79751 5739.371405 5730.457326 3925.658925 5963.909282 0.958942343 0.991269102 0.927073042 0.989233878 1.041711061 0.928719276 0.962350555 0.960855884 0.658235855 1 12.5420426 -8.044723584 24.99326269 0.822593753 0.971396855 0.317942304 0.082563052 456.167226 254921.0684 0.050554508 0.019109888 9.02E-09 8.044723584 0.148803102 RTDEAAFQK ddPTM_A459_MK2206_30min_R2 3 RTDEAAFQK 9 1 P26447 P26447 S100A4 Protein S100-A4 0 ;; 157.75 0.0011669 15455300 65547.2 82175 68266 85400 87268 95564 77632 69827 88371 66608 FALSE TRUE 70565.54403 78094.30899 70541.95437 78422.54682 83841.41983 99200.75498 67438.82515 78953.62865 96057.34984 64434.58641 1.095150104 1.211993641 1.094784002 1.217087766 1.301186591 1.539557565 1.04662463 1.225329952 1.490773126 1 15.97554767 -5.991276457 4.622517561 1.27999154 1.142278842 0.117375913 0.160484205 0.407849007 22.81094204 0.046222976 0.066666694 1.02E-06 5.991276457 -0.137712698 RTDGGTS(ph)K ddPTM_A459_MK2206_30min_R1 1 RTDGGTSK 8 1 F8W031 F8W031 1 RTDGGT(0.006)S(0.994)K 80.916 0.039327 0 2291.3 1966.6 1999.8 1781.4 1523 1796.6 2695.5 2448.5 280.98 1586.5 TRUE FALSE 2096.412903 1838.573983 1864.059148 1918.603737 1462.335685 1898.321939 2515.688113 2427.093023 310.1888765 1783.047597 1.175747022 1.03114128 1.045434317 1.076024969 0.820132725 1.064650177 1.410892293 1.361204842 0.173965562 1 10.8001295 -8.25014878 24.99425188 0.586982732 1.113465286 0.435137885 0.244155181 599.952232 1328135.057 0.166923224 0.061820999 5.62E-09 8.25014878 0.526482554 RTDLCDHALHISHDEL ddPTM_A459_MK2206_30min_R2 1 RTDLCDHALHISHDEL 16 1 Q9Y2B0;H0YI18 Q9Y2B0 CNPY2 Protein canopy homolog 2 0 92.65 0.0035056 3512300 2463.8 11223 6266.2 16510 14674 21459 14229 11408 14965 15515 FALSE TRUE 2652.430422 10665.68214 6475.111981 15161.08019 14097.82503 22275.63728 12360.71521 12899.06477 16266.62865 15008.74682 0.176725642 0.710631092 0.43142256 1.010149639 0.939307272 1.48417703 0.823567441 0.859436496 1.083809917 1 13.8735159 -5.765037544 23.4994397 1.029493145 0.466696738 0.625342429 0.208619607 28.44743678 185793.8702 0.058343479 0.090665048 1.72E-06 5.765037544 -0.562796407 RTDVS(ph)DPGR ddPTM_A459_MK2206_30min_R1 1 RTDVSDPGR 9 1 P41002 P41002 CCNF Cyclin-F 1 RT(0.001)DVS(0.999)DPGR 74.165 0.031986 5871400 1267.7 1245.6 1232.2 780.02 988.71 956.98 1257.5 1082.5 499.03 1222 TRUE FALSE 1159.875458 1164.511214 1148.561697 840.0972756 949.3275871 1011.163381 1173.614469 1073.035817 550.9059543 1373.390586 0.844534301 0.84790971 0.836296469 0.611695816 0.691229135 0.736253322 0.854538018 0.781304188 0.40112839 1 10.42352626 -5.621033278 11.39732904 0.720524082 0.845179901 0.119083302 0.146537614 0.840755567 90.97268479 0.038694121 0.067037954 2.39E-06 5.621033278 0.124655819 RTES(ph)VPSDINNPVDR ddPTM_A459_MK2206_30min_R1 4 RTESVPSDINNPVDR 15 1 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0;A8MY87 KSR1 Kinase suppressor of Ras 1 1 RT(0.043)ES(0.955)VPS(0.002)DINNPVDR;RT(0.034)ES(0.957)VPS(0.01)DINNPVDR;RT(0.176)ES(0.821)VPS(0.003)DINNPVDR;RT(0.43)ES(0.569)VPS(0.001)DINNPVDR 182.91 3.73E-05 56599000 11704 9984.4 11215.2 8748 12197.1 11158.4 11927.2 11254.2 9627.6 8675.7 TRUE FALSE 10708.51334 9334.413745 10453.94347 9421.772476 11711.26368 11790.17897 11131.55825 11155.80572 10628.42347 9750.511214 1.098251477 0.957325574 1.072143116 0.966284974 1.201092273 1.209185724 1.141638423 1.144125213 1.090037562 1 13.25126215 -6.260726778 24.9974133 1.142659347 1.022248865 0.366283018 0.068247293 62.11319953 2178892.166 0.019824126 0.024106114 5.49E-07 6.260726778 -0.120410483 RTES(ph)VPSDINNPVDR ddPTM_A459_MK2206_30min_R2 4 RTESVPSDINNPVDR 15 1 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0;A8MY87 KSR1 Kinase suppressor of Ras 1 1 RT(0.262)ES(0.737)VPSDINNPVDR;RT(0.006)ES(0.994)VPSDINNPVDR;RT(0.006)ES(0.993)VPS(0.001)DINNPVDR;RT(0.232)ES(0.765)VPS(0.003)DINNPVDR 122.16 0.00081691 106472400 60754.9 67306.7 62431.1 114123 78587 85551.6 71340 69096.8 80620.8 72316 TRUE FALSE 65406.34186 63964.34715 64512.52171 104798.7858 75501.27951 88807.32609 61972.97231 78127.989 87633.05145 69956.33484 0.934959529 0.914346746 0.9221827 1.498059984 1.079262939 1.269467966 0.885880778 1.116810782 1.252682143 1 16.09416709 RTGAPAQADSR ddPTM_A459_MK2206_30min_R2 1 RTGAPAQADSR 11 1 P20290 P20290 BTF3 Transcription factor BTF3 0 101.56 0.020507 291150 587.26 2287.2 2035.9 2490.3 2378.4 655.09 1174.5 2104.2 1271.8 2209.8 FALSE TRUE 632.2210771 2173.620974 2103.77589 2286.834524 2285.012065 680.019909 1020.286739 2379.226165 1382.418865 2137.694407 0.295749044 1.016806222 0.984133131 1.069766809 1.068914274 0.318109037 0.47728372 1.112987037 0.646686851 1 11.06183991 -4.750389418 24.95403108 0.847351723 0.295747831 0.287221888 0.264038005 695.1328281 1569708.94 0.070094456 1.036031709 1.78E-05 4.750389418 -0.551603891 RTGGPAYGPSSDVSTAS(ph)ETESEK ddPTM_A459_MK2206_30min_R1 1 RTGGPAYGPSSDVSTASETESEK 23 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 RTGGPAYGPSSDVSTAS(0.853)ET(0.14)ES(0.007)EK 182.35 2.83E-17 4233000 1199.4 1405.7 1061.1 1065.8 1119.6 1017.5 1461.5 922.77 1102.6 1198.9 TRUE FALSE 1097.384732 1314.188675 989.0754884 1147.888101 1075.003961 1075.109971 1364.006002 914.7023192 1217.219216 1347.428783 0.814428744 0.975330712 0.734046579 0.851910034 0.79781876 0.797897436 1.012302853 0.678850215 0.903364416 1 10.39599331 RTGGPAYGPSSDVSTAS(ph)ETESEKR ddPTM_A459_MK2206_30min_R1 2 RTGGPAYGPSSDVSTASETESEKR 24 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 RTGGPAYGPSSDVSTAS(0.676)ET(0.239)ES(0.085)EKR;RTGGPAYGPSSDVS(0.001)T(0.024)AS(0.939)ET(0.018)ES(0.018)EKR 136.16 9.05E-08 25409000 1856.25 1745.72 1832.12 1582.38 1305.69 1302.95 1575.04 1478.99 1704.98 1249.15 TRUE FALSE 1698.36619 1632.073311 1707.760799 1704.255182 1253.681602 1376.721903 1469.971955 1466.059346 1882.218772 1403.904133 1.209745132 1.162524757 1.216436906 1.213939857 0.89299659 0.980638116 1.047060067 1.044273118 1.340703207 1 10.45522871 -6.199094957 24.99510385 1.049448662 1.199064581 0.312151426 0.108853739 296.543199 118889.5463 0.033105691 0.042739254 6.32E-07 6.199094957 0.149615919 RTGGPAYGPSSDVSTAS(ph)ETESEKR ddPTM_A459_MK2206_30min_R2 1 RTGGPAYGPSSDVSTASETESEKR 24 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 RTGGPAYGPSS(0.001)DVST(0.014)AS(0.615)ET(0.185)ES(0.185)EKR 64.305 0.0012284 16931000 52420 61018 57919 53239 54019 50696 61166 53160 43219 73746 TRUE FALSE 56433.3155 57987.93485 59849.99055 48889.2034 51897.94264 52625.2718 53134.83073 60108.19453 46978.1105 71339.67406 0.79105093 0.812842722 0.838943987 0.685301749 0.727476587 0.737671885 0.744814599 0.842563347 0.658513108 1 16.122417 -10.67285505 4.941739107 1.000014998 0.761975047 0.600351642 0.058745259 9.75E-06 1.68E-06 0.057146245 0.013859128 2.12E-11 10.67285505 -0.23803995 RTIQEVLEEQS(ph)EDEDR ddPTM_A459_MK2206_30min_R1 4 RTIQEVLEEQSEDEDR 16 1 P18858-3;P18858;M0R0Q7;P18858-2 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR 247.5 5.38E-29 27453300 5728.05 6480.65 6434.24 5112.21 5871.02 5964.9 7002.96 5589.7 5943.76 7247.57 TRUE FALSE 5240.849268 6058.758507 5997.501716 5505.9533 5637.164841 6302.627483 6535.805316 5540.829842 6561.635122 8145.453688 0.643407902 0.743820877 0.736300511 0.675954159 0.692062721 0.773760152 0.802386898 0.680235878 0.805557968 1 12.99177934 -14.52287875 0.193391981 2.207911981 0.680619451 0.787696832 0.044649834 62.69142938 0.614083692 29.09830231 0.117544312 3.00E-15 14.52287875 -1.527292531 RTIQEVLEEQS(ph)EDEDR ddPTM_A459_MK2206_30min_R2 4 RTIQEVLEEQSEDEDR 16 1 P18858-3;P18858;M0R0Q7;P18858-2 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR 177.12 6.04E-07 23511800 76368 70965 76144 81647 75419 65090 86401 71652 62014 88675 TRUE FALSE 82214.7928 67440.98129 78682.60296 74976.17892 72457.67111 67567.04556 75056.44491 81017.16242 67407.86562 85781.54201 0.958420551 0.786194556 0.917243979 0.874036269 0.844676715 0.787664152 0.874971971 0.944459152 0.785808509 1 16.38837963 -10.99885153 3.170291516 1.00298222 0.863225716 0.312230681 0.060675022 56345386.94 65824533.15 1463436.699 0.014109706 1.00E-11 10.99885153 -0.139756504 RTIQEVLEEQS(ph)EDEDREAK ddPTM_A459_MK2206_30min_R1 2 RTIQEVLEEQSEDEDREAK 19 2 P18858-3;P18858;M0R0Q7;P18858-2 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 RT(0.001)IQEVLEEQS(0.999)EDEDREAK;RT(0.001)IQEVLEEQS(0.999)EDEDREAK 93.388 0.0023075 45447200 2112.72 2158.94 1914.89 2341.02 1779.09 1787.39 1953.09 1892.53 1695.27 1363.48 TRUE FALSE 1933.02207 2018.392614 1784.912602 2521.325766 1708.225078 1888.590477 1822.80293 1875.98381 1871.499383 1532.398196 1.261435882 1.3171463 1.164783805 1.645346342 1.114739682 1.232441073 1.189509968 1.224214316 1.221287905 1 10.58157552 RTIQEVLEEQS(ph)EDEDREAK ddPTM_A459_MK2206_30min_R2 2 RTIQEVLEEQSEDEDREAK 19 2 P18858-3;P18858;M0R0Q7;P18858-2 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 RTIQEVLEEQS(1)EDEDREAK;RTIQEVLEEQS(1)EDEDREAK 52.365 0.02851 67902000 42542 58192 53137 55137 64462 55208 51704 38873 50379 62999 TRUE FALSE 45799.04823 55302.2699 54908.56106 50632.13073 61930.89798 57308.97913 44915.20269 43953.83457 54760.87436 60943.34779 0.751502008 0.907437348 0.900977105 0.830806521 1.016204397 0.940364801 0.736999268 0.721224484 0.898553761 1 15.89518113 -9.761786564 11.5734502 1 0.857830088 0.183005492 0.091198945 0 0 0.094206659 0.022848471 1.73E-10 9.761786564 -0.142169912 RTLEGELHDLR ddPTM_A459_MK2206_30min_R1 2 RTLEGELHDLR 11 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;H0YAB0;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 128.85 0.0018206 25030000 8696.2 8922.3 8597.6 7865 10342 8947.8 9012.5 7823.1 6733.6 5060.7 FALSE TRUE 7956.542524 8341.456648 8014.018866 8470.763663 9930.05624 9454.416703 8411.292569 7754.703461 7433.581816 5687.657722 1.398913738 1.46658907 1.409019188 1.489323739 1.745895538 1.662268928 1.478867573 1.363426535 1.306967152 1 12.47361893 -8.501302274 1.196213515 1.007774227 1.526824145 0.697877074 0.10527266 0.307975071 0.966745997 0.113733369 0.03569352 3.15E-09 8.501302274 0.519049918 RTLEGELHDLR ddPTM_A459_MK2206_30min_R2 2 RTLEGELHDLR 11 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;H0YAB0;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 109.24 0.0064188 8957100 17944.2 29629 21251 27918 31703 27176.4 25350 23607.2 28589 25527 FALSE TRUE 19318.02175 28157.66694 21959.49773 25637.01009 30458.18093 28210.61695 22021.51455 26692.7421 31075.61954 24694.05608 0.782294399 1.140260914 0.889262487 1.038185465 1.23342155 1.142405154 0.891773894 1.080937939 1.258425082 1 14.5918762 -4.753075716 24.99740207 1.071875125 0.78229386 0.350463427 0.119463907 382.9536492 1144487.848 0.030480881 0.341676629 1.77E-05 4.753075716 -0.289581265 RTMADGERY(ph)FRSS(ph)K ddPTM_A459_MK2206_30min_R2 1 RTMADGERYFRSSK 14 3 E9PS66 E9PS66 ZFP69B 2 RTMADGERY(0.997)FRS(0.071)S(0.932)K 73.877 0.041091 0 6317.9 7627.1 8497.5 7140.6 7392.4 8231.8 9040.4 6226.5 7336.1 7513 TRUE FALSE 6801.603282 7248.349305 8780.802409 6557.190138 7102.137232 8545.066917 7853.384621 7040.324929 7974.180717 7267.851425 0.935847871 0.997316659 1.208170324 0.902218518 0.977199012 1.175734948 1.080564827 0.968694118 1.097185434 1 12.82731321 RTPALIALR ddPTM_A459_MK2206_30min_R1 1 RTPALIALR 9 1 P52895;B4DK69;H0Y804;Q04828;A0A0A0MSS8;P42330;S4R3Z2;P42330-2 P52895;Q04828;A0A0A0MSS8;P42330-2 AKR1C2;AKR1C1;AKR1C3 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C3 0 114.4 0.011578 5950200 2128.1 2791.6 3023.6 2858.3 2783.1 2628.3 2782.9 2695.5 2540.7 2286.1 FALSE TRUE 1947.09392 2609.866333 2818.366456 3078.446761 2672.243234 2777.112075 2597.257819 2671.933528 2804.814857 2569.319327 0.757824806 1.015781225 1.09693117 1.198156542 1.040058822 1.080874629 1.010873888 1.039938282 1.091656777 1 11.32717049 -4.768100636 3.238879531 1.072574088 0.707695937 0.75545327 0.052982664 0.173729399 2.743576446 0.014056451 0.164578191 1.71E-05 4.768100636 -0.364878151 RTPAPPEPGS(ph)PAPGEGPSGR ddPTM_A459_MK2206_30min_R1 2 RTPAPPEPGSPAPGEGPSGR 20 1 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 RTPAPPEPGS(1)PAPGEGPSGR;RTPAPPEPGS(1)PAPGEGPSGR 156.31 8.61E-07 89323000 6179 6076.1 6047.5 6050.3 7813 6260 6299.4 6295.3 4929.8 3572.4 TRUE FALSE 5653.443603 5680.544786 5637.012549 6516.295154 7501.791666 6614.43579 5879.17852 6240.260856 5442.270351 4014.975882 1.408089057 1.414839081 1.403996615 1.622997334 1.868452485 1.647440977 1.464312288 1.554246162 1.355492663 1 11.97117561 -8.67062092 1.675433639 0.999954089 1.556455555 0.604435774 0.135750728 0.456438178 2.586160499 0.147925741 0.042283386 2.13E-09 8.67062092 0.556501466 RTPAPPEPGS(ph)PAPGEGPSGR ddPTM_A459_MK2206_30min_R2 4 RTPAPPEPGSPAPGEGPSGR 20 1 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 RTPAPPEPGS(1)PAPGEGPSGR;RTPAPPEPGS(0.995)PAPGEGPS(0.005)GR;RTPAPPEPGS(1)PAPGEGPSGR;RTPAPPEPGS(0.997)PAPGEGPS(0.003)GR 110.89 0.00018719 101591200 49701.3 96435 58293 83884 84423 77810 67449 55892 74577 60086 TRUE FALSE 53506.46974 91646.17813 60236.45953 77030.40887 81108.12883 80771.11407 58592.86528 63197.27631 81063.57266 58125.39874 0.9205351 1.576697625 1.036319076 1.325245255 1.395399095 1.389601032 1.00804238 1.08725751 1.394632543 1 15.82688109 -10.94250048 3.387280535 0.997387523 1.241757377 0.109007426 0.202946075 65781553.25 82559588.26 1622982.617 0.048605884 1.14E-11 10.94250048 0.244369855 RTPGNQTPVMPSAS(ph)PILHSQGK ddPTM_A459_MK2206_30min_R2 1 RTPGNQTPVMPSASPILHSQGK 22 1 Q9UIF8-4;Q9UIF8-2;Q9UIF8-5;Q9UIF8-3;Q9UIF8;A0A0A0MR97 Q9UIF8-4 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B 1 RTPGNQT(0.001)PVMPS(0.258)AS(0.74)PILHS(0.001)QGK 73.688 0.012726 0 9119.4 9695.3 9541 9768.8 11614 10339 12182 9786.2 10236 9371.1 TRUE FALSE 9817.588276 9213.8455 9859.092178 8970.657791 11157.976 10732.45789 10582.48877 11065.28994 11126.30878 9065.321774 1.082982879 1.016383724 1.087561195 0.989557571 1.230841693 1.183902586 1.16735942 1.220617449 1.227348466 1 13.14614251 -6.263444656 24.99995901 1.183104416 1.045242929 0.451038525 0.068240927 145.3561461 1812163.754 0.019359629 0.023092313 5.45E-07 6.263444656 -0.137861487 RTPHVQAVQGPLGS(ph)PPK ddPTM_A459_MK2206_30min_R1 3 RTPHVQAVQGPLGSPPK 17 1 Q15149 Q15149 PLEC Plectin 1 RTPHVQAVQGPLGS(1)PPK;RTPHVQAVQGPLGS(1)PPK;RTPHVQAVQGPLGS(1)PPK 193.41 1.55E-07 166182000 13095.4 14383.6 14183 13160.6 10720.8 9087.3 10328.2 11490.3 10403 10482.6 TRUE FALSE 11981.56746 13447.22503 13220.29748 14174.23169 10293.76783 9601.815073 9639.224623 11389.84152 11484.42908 11781.26363 1.017001897 1.1414077 1.122145968 1.203116418 0.873740556 0.815007233 0.818182576 0.966775881 0.974804524 1 13.52420667 -6.270450345 24.99197444 0.897274891 1.122469259 0.670993911 0.072771708 385.2976264 1068623.437 0.023660413 0.027194678 5.36E-07 6.270450345 0.225194369 RTPHVQAVQGPLGS(ph)PPK ddPTM_A459_MK2206_30min_R2 1 RTPHVQAVQGPLGSPPK 17 1 Q15149 Q15149 PLEC Plectin 1 RTPHVQAVQGPLGS(1)PPK 74.703 0.01176 188560000 49498 68290 62102 45367 56322 41734 65963 59930 54452 62872 TRUE FALSE 53287.60494 64898.8179 64172.44968 41660.37098 54110.51528 43322.21661 57301.97886 67763.05677 59188.13653 60820.49179 0.876145578 1.067055132 1.055112312 0.68497261 0.889675728 0.712296388 0.942149219 1.114148452 0.973161097 1 15.89226986 -7.53084819 23.25582387 1.031822774 0.883626448 0.235055556 0.11966402 128.9094095 376158.5116 0.059941213 0.034712385 2.95E-08 7.53084819 -0.148196325 RTPHVQAVQGPLGS(ph)PPKR ddPTM_A459_MK2206_30min_R1 2 RTPHVQAVQGPLGSPPKR 18 2 Q15149 Q15149 PLEC Plectin 1 RTPHVQAVQGPLGS(1)PPKR;RTPHVQAVQGPLGS(1)PPKR 122.65 0.0010228 95098000 4146.4 4406.4 4372.8 3833.7 4070.1 3543.7 3925.4 4073.6 3398.4 3115.8 TRUE FALSE 3793.726906 4119.542559 4075.986519 4128.972238 3907.979298 3744.341232 3663.543728 4037.984945 3751.675841 3501.808827 1.083362083 1.176404185 1.16396603 1.179096987 1.115988762 1.069259179 1.046186102 1.153114046 1.071353699 1 11.77388461 -6.544782128 4.010391573 1.076662482 1.153335459 0.439040798 0.043579467 0.2200445 7.994250919 0.014443471 0.015027733 2.85E-07 6.544782128 0.076672977 RTPHVQAVQGPLGS(ph)PPKR ddPTM_A459_MK2206_30min_R2 1 RTPHVQAVQGPLGSPPKR 18 2 Q15149 Q15149 PLEC Plectin 1 RTPHVQAVQGPLGS(1)PPKR 47 0.044661 110340000 29852 40279 37987 31308 44317 31031 43016 37066 32543 38866 TRUE FALSE 32137.49207 38278.80343 39253.46762 28750.03625 42576.8919 32211.90645 37367.94753 41910.65347 35373.53132 37597.8056 0.85477042 1.018112701 1.044036134 0.764673251 1.132430237 0.856749641 0.993886397 1.114710095 0.940840316 1 15.19836084 -7.518616609 24.92501893 1.027524771 0.950925228 0.086403973 0.107147348 431.1932848 2521673.503 0.046607555 0.027740025 3.03E-08 7.518616609 -0.076599543 RTPS(ph)DDEEDNLFAPPK ddPTM_A459_MK2206_30min_R1 3 RTPSDDEEDNLFAPPK 16 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 RTPS(1)DDEEDNLFAPPK;RT(0.002)PS(0.998)DDEEDNLFAPPK;RT(0.009)PS(0.991)DDEEDNLFAPPK 259.22 9.19E-39 58885000 10528.4 10492.7 11044.9 8993.5 10720.5 9245 9929.6 9254.3 8878.7 8560 TRUE FALSE 9632.904293 9809.623323 10295.20296 9686.180928 10293.47978 9768.443911 9267.214502 9173.390631 9801.672638 9620.477425 1.00129171 1.01966076 1.070134309 1.006829547 1.069955193 1.015380368 0.963280105 0.953527588 1.018834327 1 13.23189278 -7.061285388 5.669556089 0.980712342 1.034239752 0.420505832 0.027376427 0.198358483 13.02585106 0.01035047 0.008088063 8.68E-08 7.061285388 0.05352741 RTPS(ph)DDEEDNLFAPPK ddPTM_A459_MK2206_30min_R2 5 RTPSDDEEDNLFAPPK 16 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 RT(0.225)PS(0.775)DDEEDNLFAPPK;RT(0.011)PS(0.989)DDEEDNLFAPPK;RT(0.319)PS(0.681)DDEEDNLFAPPK;RT(0.051)PS(0.949)DDEEDNLFAPPK;RT(0.247)PS(0.753)DDEEDNLFAPPK 150.13 0.00012276 121715500 263820 364943 312446 347410 337278 275616 349092 276315 285201 315746 TRUE FALSE 284018.262 346820.4613 322862.7937 319025.4917 324034.771 286104.76 303255.8011 312430.3192 310007.2675 305443.2339 0.929856126 1.135466178 1.057030433 1.044467372 1.060867405 0.936687175 0.992838496 1.022875234 1.01494233 1 18.22054476 -6.716422487 24.99988153 0.994858736 1.051112642 0.199130151 0.051571051 199.3376262 110700.4129 0.01653709 0.016537021 1.92E-07 6.716422487 0.056253906 RTPT(ph)MPQEEAAACPPHILPPEK ddPTM_A459_MK2206_30min_R1 1 RTPTMPQEEAAACPPHILPPEK 22 1 Q9NYV4 Q9NYV4 CDK12 Cyclin-dependent kinase 12 1 RT(0.055)PT(0.945)MPQEEAAACPPHILPPEK 60.621 0.0081728 5261500 2276.9 2667.7 2366.9 1907.1 2368.4 1927.1 2114.5 2545.5 2235 1773.1 TRUE FALSE 2083.237699 2494.032245 2206.241423 2053.985172 2274.061613 2036.210737 1973.445563 2523.244962 2467.336248 1992.765014 1.045400578 1.251543573 1.107125731 1.030721213 1.141158941 1.021801729 0.990305204 1.266202961 1.238147112 1 10.96055588 -7.769105089 24.99949688 1.189131244 1.089097001 0.125358219 0.096510737 314.8950801 1026919.774 0.051421255 0.025447451 1.70E-08 7.769105089 -0.100034242 RTQS(ph)GNFYTDTLGMAEFR ddPTM_A459_MK2206_30min_R1 1 RTQSGNFYTDTLGMAEFR 18 1 H0YDJ2;E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 H0YDJ2 PPFIBP2 Liprin-beta-2 1 RT(0.117)QS(0.882)GNFY(0.001)TDTLGMAEFR 60.8 0.024586 3006900 445.62 399.88 438.03 441.28 471.28 458.2 499.86 408.01 220.61 219.78 TRUE FALSE 407.717679 373.8477393 408.297744 475.2674621 452.5079196 484.142888 466.5152514 404.4428116 243.543199 247.0080057 1.650625363 1.513504545 1.652973728 1.924097402 1.831956492 1.960029136 1.8886645 1.63736722 0.985972897 1 7.948413991 -8.212683241 3.792388552 0.973988528 1.773964969 0.844361894 0.13219693 0.092216347 2.640519823 0.125640119 0.03968481 6.13E-09 8.212683241 0.799976441 RTQS(ph)LSALPK ddPTM_A459_MK2206_30min_R1 2 RTQSLSALPK 10 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 RT(0.211)QS(0.787)LS(0.002)ALPK;RTQS(0.993)LS(0.007)ALPK 144.28 0.0017916 66778000 10511.2 11627.3 11958.3 10517.8 10874.7 9223.8 9893.9 9580.1 9571.1 8467.3 TRUE FALSE 9617.167243 10870.36066 11146.60391 11327.88278 10441.53767 9746.043585 9233.895983 9496.342196 10566.0501 9516.293049 1.010600156 1.142289398 1.17131785 1.190367165 1.09722742 1.024142861 0.970324888 0.997903506 1.110311551 1 13.21618398 -6.673457505 3.691331167 1.016641235 1.133635785 0.455574888 0.056187753 0.208966139 5.523453917 0.020192422 0.019811411 2.12E-07 6.673457505 0.11699455 RTQS(ph)LSALPK ddPTM_A459_MK2206_30min_R2 4 RTQSLSALPK 10 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 RT(0.373)QS(0.614)LS(0.013)ALPK;RT(0.376)QS(0.624)LSALPK;RT(0.001)QS(0.962)LS(0.037)ALPK;RT(0.001)QS(0.92)LS(0.079)ALPK 120.03 0.0063534 70776000 356791 452670 424571 453025 465523 377823 483440 342308 350314 386516 TRUE FALSE 384107.1933 430191.066 438725.9852 416011.4083 447244.228 392201.319 419963.7473 387048.8309 380783.6785 373904.0146 1.02728823 1.150538773 1.173365271 1.112615517 1.196147168 1.048935833 1.123185981 1.03515559 1.018399545 1 18.51230844 -7.822612148 1.154794103 0.998803005 1.129109676 0.471085365 0.048963705 0.415801541 1.000738867 0.041848865 0.015913017 1.50E-08 7.822612148 0.13030667 RTQS(ph)SLTVSEVLTR ddPTM_A459_MK2206_30min_R1 4 RTQSSLTVSEVLTR 14 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 RT(0.001)QS(0.931)S(0.06)LT(0.006)VS(0.002)EVLTR;RT(0.037)QS(0.686)S(0.126)LT(0.025)VS(0.126)EVLTR;RT(0.003)QS(0.957)S(0.038)LT(0.003)VSEVLTR;RT(0.001)QS(0.945)S(0.044)LT(0.002)VS(0.007)EVLTR 133.9 0.0012371 21009600 5426.38 5883 5841.1 6625.5 6514.2 5236.9 5164.17 5815.33 4099.9 3696.56 TRUE FALSE 4964.837886 5500.015631 5444.622406 7135.797158 6254.72562 5533.408752 4819.677642 5764.487183 4526.099277 4154.51776 1.195045532 1.323863791 1.310530541 1.717599387 1.505523861 1.331901576 1.160105196 1.387522576 1.089440348 1 12.02046531 -8.238021272 0.867606293 0.999339338 1.4025176 0.427187166 0.149629912 0.594947194 0.945623795 0.153458011 0.057088429 5.78E-09 8.238021272 0.403178262 RTS(ph)FSFQK ddPTM_A459_MK2206_30min_R2 1 RTSFSFQK 8 1 H0Y7F8;Q9BPZ7-4;Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7 H0Y7F8 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 RT(0.197)S(0.789)FS(0.014)FQK 68.44 0.039401 57435000 27213 40163 43808 50340 38304 45634 49864 31755 33753 38636 TRUE FALSE 29296.4482 38168.56382 45268.53686 46227.06097 36799.9925 47370.63385 43316.7969 35905.48753 36688.77493 37375.31048 0.783844945 1.021223993 1.211188249 1.236834166 0.984607004 1.267431179 1.158968216 0.96067396 0.981631308 1 15.18979794 -10.60050742 11.43336222 1.000009814 1.078239289 0.014400466 0.14386764 0 0 0.144889399 0.035140841 2.51E-11 10.60050742 0.078229475 RTS(ph)FSTSDVSK ddPTM_A459_MK2206_30min_R1 1 RTSFSTSDVSK 11 1 M0R300;M0R0P8;Q13459-2;Q13459 M0R300 MYO9B Unconventional myosin-IXb 1 RT(0.165)S(0.716)FS(0.1)T(0.015)S(0.003)DVSK 106.3 0.0057496 9749000 3006.1 2819.4 2486.5 2886.3 3234.2 3676 4940.4 5990.9 5244.8 5016 TRUE FALSE 2750.415409 2635.856548 2317.723308 3108.603326 3105.374965 3884.131943 4610.83493 5938.522193 5790.015729 5637.419949 0.487885493 0.467564342 0.411131924 0.551423054 0.550850388 0.688991059 0.817898076 1.053411356 1.027068372 1 12.46081933 -7.216200405 1.100686066 1.050723591 0.469243132 0.967420479 0.042803631 0.080041786 0.190454167 0.029221891 0.017258263 6.08E-08 7.216200405 -0.581480459 down RTS(ph)FYLPK ddPTM_A459_MK2206_30min_R2 1 RTSFYLPK 8 1 Q9NS23-3;Q9NS23-4;Q9NS23-2;Q9NS23-5;Q9NS23 Q9NS23-3 RASSF1 Ras association domain-containing protein 1 1 RT(0.141)S(0.859)FYLPK 96.342 0.010861 5864500 21146 24534 20277 21194 22974 21161 23451 18250 21735 21370 TRUE FALSE 22764.95402 23315.67724 20953.02506 19462.3824 22071.92532 21966.29668 20371.85553 20635.33766 23625.47101 20672.69865 1.101208623 1.127848745 1.013560223 0.941453399 1.067684761 1.062575189 0.985447322 0.998192738 1.142834393 1 14.33543911 -5.262296472 24.99593727 1.024664194 1.11452869 0.310442873 0.052441793 86.82487331 2532232.263 0.01366889 0.031453131 5.47E-06 5.262296472 0.089864496 RTS(ph)LGEVSK ddPTM_A459_MK2206_30min_R1 1 RTSLGEVSK 9 1 Q9ULJ8-3;Q9ULJ8;Q9ULJ8-4;Q9ULJ8-5 Q9ULJ8-3 PPP1R9A Neurabin-1 1 RT(0.213)S(0.787)LGEVSK 64.827 0.046224 15946000 3032.5 3457.8 3164.3 2647.4 2867.8 3068.8 3335.4 2623.5 2937.2 3482.6 TRUE FALSE 2774.569951 3232.696592 2949.516132 2851.303207 2753.569453 3242.552804 3112.901552 2600.563016 3242.532451 3914.05078 0.708874286 0.825920963 0.753571248 0.728478849 0.703508873 0.828439125 0.795314554 0.664417291 0.828433925 1 11.93444676 -8.538939166 22.87381518 1.000000002 0.754801882 0.689755507 0.05072056 530.1592623 755071.6534 0.048458893 0.012512032 2.89E-09 8.538939166 -0.24519812 RTS(ph)LGEVSK ddPTM_A459_MK2206_30min_R2 1 RTSLGEVSK 9 1 Q9ULJ8-3;Q9ULJ8;Q9ULJ8-4;Q9ULJ8-5 Q9ULJ8-3 PPP1R9A Neurabin-1 1 RT(0.186)S(0.814)LGEVSK 75.088 0.030786 7230600 44021 35632 31021 37104 26269 23653 34992 25551 30162 37099 TRUE FALSE 47391.28161 33862.56669 32055.22466 34072.48451 25237.54707 24553.13149 30397.50837 28890.60343 32785.43624 35888.46267 1.320515789 0.943550216 0.893190242 0.949399388 0.703221737 0.684151108 0.846999456 0.805010894 0.913536936 1 15.1312325 RTS(ph)LPCIPR ddPTM_A459_MK2206_30min_R2 1 RTSLPCIPR 9 1 Q14432 Q14432 PDE3A "cGMP-inhibited 3,5-cyclic phosphodiesterase A" 1 RT(0.156)S(0.844)LPCIPR 91.313 0.028216 6373000 19835 20682 19396 23210 22184 20740 22060 14452 21866 24620 TRUE FALSE 21353.58285 19654.96195 20042.65296 21313.66875 21312.94469 21529.27523 19163.4955 16340.92602 23767.86516 23816.65142 0.896582079 0.825261352 0.841539501 0.894906189 0.894875788 0.903958951 0.804625939 0.686113498 0.99795159 1 14.53968297 -8.448263303 24.99869321 1.000007271 0.846650517 0.500993794 0.062010904 97.75811527 32751.80948 0.062534082 0.01614623 3.56E-09 8.448263303 -0.153356754 RTS(ph)MGGTQQQFVEGVR ddPTM_A459_MK2206_30min_R1 2 RTSMGGTQQQFVEGVR 16 1 A0A2R8Y6G0;A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222 A0A2R8Y6G0 CTNNB1 Catenin beta-1 1 RT(0.19)S(0.809)MGGT(0.001)QQQFVEGVR;RT(0.043)S(0.957)MGGTQQQFVEGVR 164.5 1.24E-05 28182000 1497.19 1323.94 1512.23 1333.8 1651.75 1511.69 1865.35 1598.1 1382.37 1545.17 TRUE FALSE 1369.846128 1237.751265 1409.584041 1436.529507 1585.9573 1597.280581 1740.915905 1584.12798 1526.072308 1736.597325 0.788810456 0.712745118 0.811693085 0.827209328 0.913255639 0.919776023 1.002486806 0.912202246 0.878771542 1 10.76204755 -6.045256793 1.319065913 0.942437403 0.752223417 0.782949359 0.040818388 0.198984979 0.702475305 0.01506852 0.026520638 9.01E-07 6.045256793 -0.190213986 RTS(ph)MGGTQQQFVEGVR ddPTM_A459_MK2206_30min_R2 1 RTSMGGTQQQFVEGVR 16 1 A0A2R8Y6G0;A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222 A0A2R8Y6G0 CTNNB1 Catenin beta-1 1 RT(0.058)S(0.933)MGGT(0.009)QQQFVEGVR 81.316 0.011179 14063000 24061 29771 22285 25305 30196 37368 38365 17823 37229 34234 TRUE FALSE 25903.12866 28292.61543 23027.97078 23237.50055 29010.35332 38790.06543 33327.62942 20152.5273 40467.11113 33116.94738 0.782171387 0.854324377 0.695353062 0.701680028 0.875997204 1.171305585 1.006361759 0.608526114 1.22194569 1 15.01528208 -6.5220575 24.99550729 0.982589349 0.764246311 0.341067198 0.158364461 39.37685199 1198532.756 0.052077124 0.052697694 3.01E-07 6.5220575 -0.218343038 RTS(ph)PQVLGSILK ddPTM_A459_MK2206_30min_R1 1 RTSPQVLGSILK 12 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 RT(0.203)S(0.797)PQVLGSILK 116.78 0.0025298 173430000 12543 11200 11544 10919 11850 11819 11810 11400 9836.7 9093.4 TRUE FALSE 11476.15198 10470.87796 10760.42544 11759.98327 11377.98941 12488.18157 11022.17645 11300.331 10859.26017 10219.95904 1.122915653 1.024551852 1.052883421 1.150687906 1.113310666 1.221940471 1.078495168 1.105711966 1.062554177 1 13.31910179 -8.581505394 1.76947378 1.000178072 1.109407684 0.309317326 0.050894328 0.577383588 4.015267941 0.052106637 0.014821172 2.62E-09 8.581505394 0.109229612 RTS(ph)PQVLGSILK ddPTM_A459_MK2206_30min_R2 2 RTSPQVLGSILK 12 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 RT(0.044)S(0.956)PQVLGSILK;RT(0.457)S(0.543)PQVLGSILK 121.95 0.0018791 379910000 155436 178206 171149 194152 191833 183990 200086 161633 179726 175867 TRUE FALSE 167336.2997 169356.5492 176855.0222 178289.1605 184300.6725 190991.8684 173814.4679 182758.9881 195358.2426 170128.4742 0.983587847 0.995462694 1.03953805 1.047967787 1.083302918 1.122633171 1.021665942 1.074241034 1.148298329 1 17.3762651 -5.462131636 1.314663074 1.077652924 0.978741558 0.39506635 0.040718767 0.546506873 1.654154621 0.012932505 0.051941547 3.45E-06 5.462131636 -0.098911366 RTS(ph)PSSLPGR ddPTM_A459_MK2206_30min_R1 1 RTSPSSLPGR 10 1 H0Y4R5;Q5SNT2 H0Y4R5 TMEM201 Transmembrane protein 201 1 RT(0.208)S(0.791)PSSLPGR 76.357 0.029612 3976800 1298.7 1053.7 792.4 844.38 1238.6 1171.1 971.18 898.84 836.97 1054.9 TRUE FALSE 1188.238745 985.1039385 738.6140958 909.4142939 1189.263939 1237.40667 906.3943542 890.9815366 923.9760266 1185.588976 1.002234981 0.830898362 0.62299339 0.767056975 1.003099694 1.043706289 0.764509769 0.751509633 0.779339253 1 10.21138822 -4.761082418 23.90226426 0.832569234 1.002235199 0.123232064 0.128041173 11.37000212 759426.6826 0.034391316 0.195567066 1.73E-05 4.761082418 0.169665965 RTS(ph)PSSLPGR ddPTM_A459_MK2206_30min_R2 1 RTSPSSLPGR 10 1 H0Y4R5;Q5SNT2 H0Y4R5 TMEM201 Transmembrane protein 201 1 RT(0.189)S(0.808)PS(0.002)S(0.001)LPGR 72.705 0.034589 4358600 6964.6 4871.4 4101.3 7150.3 3690.2 7573.5 8562.5 5041.5 4232.3 5294.1 TRUE FALSE 7497.815131 4629.49336 4238.035295 6566.097617 3545.304206 7861.71485 7438.233465 5700.44136 4600.417804 5121.353951 1.464029865 0.903958876 0.827522436 1.282101897 0.692259164 1.535085238 1.452395897 1.113073108 0.898281558 1 12.32230956 -6.765833203 24.99587323 1.222623433 1.029066687 0.081856997 0.272051338 275.1059471 1565030.582 0.095106468 0.086756516 1.71E-07 6.765833203 -0.193556746 RTS(ph)QEGPGDSVK ddPTM_A459_MK2206_30min_R2 2 RTSQEGPGDSVK 12 1 Q9NSK0-5;Q9NSK0;Q9NSK0-3 Q9NSK0-5 KLC4 Kinesin light chain 4 1 RT(0.117)S(0.883)QEGPGDSVK;RT(0.238)S(0.749)QEGPGDS(0.013)VK 135.86 0.0026136 7487500 34580 35145 36408 41501 37219 37659 39343 27772 30783 34020 TRUE FALSE 37227.47139 33399.75041 37621.82455 38110.23554 35757.59505 39092.13963 34177.21684 31401.89576 33460.4497 32909.93019 1.131192658 1.01488366 1.143175459 1.158016299 1.086529046 1.187852402 1.038507728 0.954176918 1.016728067 1 15.00623535 -7.493749319 7.037345849 0.99016848 1.116650741 0.624459638 0.04589741 0.130303417 24.06341362 0.020006241 0.012940328 3.21E-08 7.493749319 0.126482261 RTS(ph)SEDNLYLAVLR ddPTM_A459_MK2206_30min_R1 3 RTSSEDNLYLAVLR 14 1 Q15149-4 Q15149-4 PLEC Plectin 1 RT(0.036)S(0.632)S(0.332)EDNLYLAVLR;RT(0.287)S(0.483)S(0.23)EDNLYLAVLR;RT(0.009)S(0.89)S(0.101)EDNLYLAVLR 195.17 5.40E-05 100058000 5779 6143.6 5544.2 6169.1 6858.5 5934.9 5082.5 6302.7 3590.2 2738.92 TRUE FALSE 5287.465703 5743.650523 5167.875151 6644.245151 6585.311422 6270.928909 4743.455699 6247.596158 3963.414138 3078.238087 1.717692249 1.865888979 1.678841923 2.158457196 2.139311916 2.037181248 1.540964527 2.029601344 1.28755932 1 11.58788911 -8.417907791 3.541305258 1.005858576 1.897428455 0.711764253 0.194941243 0.12167308 2.71453936 0.194705739 0.051623168 3.82E-09 8.417907791 0.891569879 RTS(ph)SEDNLYLAVLR ddPTM_A459_MK2206_30min_R2 1 RTSSEDNLYLAVLR 14 1 Q15149-4 Q15149-4 PLEC Plectin 1 RT(0.078)S(0.587)S(0.335)EDNLYLAVLR 98.676 0.018365 6875600 7562 24801 19259 20774 24899 30379 22235 15495 27726 15571 TRUE FALSE 8140.952534 23569.4184 19901.08545 19076.69775 23921.34015 31535.09413 19315.51779 17520.2497 30137.55736 15062.91955 0.540463123 1.564731082 1.321197089 1.266467479 1.588094531 2.093557895 1.28232231 1.163137707 2.000777955 1 13.8787138 -4.758526332 24.84668822 1.486113641 0.540461733 0.414989996 0.332872583 73.58563756 627520.7173 0.081516835 0.553885075 1.74E-05 4.758526332 -0.945651908 RTS(ph)SEELR ddPTM_A459_MK2206_30min_R2 1 RTSSEELR 8 1 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 RT(0.022)S(0.943)S(0.035)EELR 88.134 0.016169 10859000 11538 17550 15100 17367 13874 17092 13788 16656 17549 15803 TRUE FALSE 12421.35815 16678.49252 15603.42646 15948.06055 13329.23705 17742.44804 11977.61904 18832.99639 19075.3803 15287.3494 0.812525299 1.090999628 1.020675727 1.04321947 0.871912893 1.16059675 0.783498743 1.231933404 1.247788599 1 13.90005067 -7.79461639 24.99999904 1.17989591 0.982218667 0.30476335 0.129994197 220.1359626 165877.0313 0.06605253 0.031733771 1.60E-08 7.79461639 -0.197677243 RTS(ph)STLDSEGTFNSYR ddPTM_A459_MK2206_30min_R1 2 RTSSTLDSEGTFNSYR 16 1 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 RT(0.111)S(0.888)S(0.001)TLDSEGTFNSYR;RTS(0.995)S(0.005)TLDSEGTFNSYR 172.42 1.13E-05 28196000 10639.2 10805.3 9421.5 8568.1 9747.7 7062.6 6507.1 6668.5 5203.5 4232.6 TRUE FALSE 9734.280171 10101.87301 8781.99483 9228.016547 9359.428468 7462.478309 6073.023232 6610.198008 5744.422446 4756.966442 2.046320967 2.1235956 1.846133442 1.939895237 1.96752039 1.56874731 1.276658834 1.389582644 1.207581032 1 12.21582613 -7.144774576 0.686950137 1.070566377 2.070238606 0.927267761 0.102159611 0.188744219 0.181502497 0.090410036 0.065705622 7.17E-08 7.144774576 0.99967223 RTS(ph)STLDSEGTFNSYR ddPTM_A459_MK2206_30min_R2 2 RTSSTLDSEGTFNSYR 16 1 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 RT(0.013)S(0.705)S(0.26)T(0.022)LDSEGTFNSYR;RT(0.197)S(0.785)S(0.018)TLDSEGTFNSYR 199.65 1.44E-06 24335000 46665 94087 67239 79042 68728 68701 45791 38078 53314 39419 TRUE FALSE 50237.70828 89414.7764 69480.7147 72584.01576 66029.39339 71315.4647 39778.5867 43054.92534 57951.15535 38132.76126 1.317442184 2.344828264 1.822074049 1.903455542 1.731566013 1.870188844 1.043160405 1.129079666 1.519720929 1 15.21874338 -7.254874528 24.71086812 1.183746882 1.853208601 0.59149274 0.267714308 299.4600095 1127205.398 0.099476328 0.075170397 5.56E-08 7.254874528 0.66946172 RTS(ph)VPS(ph)PEQPQPYR ddPTM_A459_MK2206_30min_R2 1 RTSVPSPEQPQPYR 14 1 Q8TEH3 Q8TEH3 DENND1A DENN domain-containing protein 1A 2 RT(0.094)S(0.904)VPS(0.981)PEQPQPY(0.021)R 119 0.010047 0 13015 16251 15411 16364 14562 14781 14423 13621 14502 12984 TRUE FALSE 14011.43841 15443.99897 15924.79505 15027.00885 13990.22271 15343.50131 12529.24277 15401.31147 15763.35775 12560.33314 1.115530794 1.229585139 1.267864066 1.196386169 1.113841691 1.221583945 0.997524718 1.226186542 1.255011118 1 13.61658711 -6.109763164 6.170323206 1.144663816 1.210765976 0.110701346 0.089984717 0.570089347 27.67469164 0.026388223 0.034362812 7.77E-07 6.109763164 0.06610216 RTS(ph)YEWYIPK ddPTM_A459_MK2206_30min_R2 1 RTSYEWYIPK 10 1 Q7Z392-4;Q7Z392-3;Q7Z392 Q7Z392-4 TRAPPC11 Trafficking protein particle complex subunit 11 1 RT(0.041)S(0.952)Y(0.007)EWYIPK 73.219 0.033815 2876400 19920 25996 19606 25679 25903 25357 19438 18262 25779 22347 TRUE FALSE 21445.09052 24705.07644 20259.65425 23580.94356 24885.91807 26321.9784 16885.76725 20648.9061 28021.21082 21617.81922 0.992009892 1.142810761 0.937173822 1.090810471 1.151176158 1.217605631 0.781104101 0.955179886 1.296208953 1 14.39993337 -10.2068012 15.01461118 0.999993103 1.05788529 0.015950233 0.143309245 0 0 0.139316082 0.033789113 6.21E-11 10.2068012 0.057892186 RTSFS(ph)TSDVSK ddPTM_A459_MK2206_30min_R2 1 RTSFSTSDVSK 11 1 M0R300;M0R0P8;Q13459-2;Q13459 M0R300 MYO9B Unconventional myosin-IXb 1 RT(0.063)S(0.195)FS(0.32)T(0.32)S(0.102)DVSK 64.842 0.042199 22661000 50407 54061 58906 63016 56737 81962 87153 75539 111040 97910 TRUE FALSE 54266.19868 51376.40935 60869.89664 57867.39122 54509.2203 85081.12134 75709.70641 85412.20666 120698.0585 94715.20472 0.572940732 0.542430431 0.642662356 0.610962003 0.575506546 0.898283666 0.799340577 0.901779254 1.274326111 1 16.53130842 -7.349262751 0.848574402 1.109378411 0.574650186 0.79168156 0.103123078 0.269164424 0.370667565 0.08255723 0.045791209 4.47E-08 7.349262751 -0.534728225 RTSS(ph)EDNLYLAVLR ddPTM_A459_MK2206_30min_R1 3 RTSSEDNLYLAVLR 14 1 Q15149-4 Q15149-4 PLEC Plectin 1 RT(0.011)S(0.235)S(0.754)EDNLYLAVLR;RT(0.001)S(0.139)S(0.86)EDNLYLAVLR;RTS(0.05)S(0.95)EDNLYLAVLR 252.38 6.03E-28 83022900 6373 6410.5 7517.7 6826.7 7563.2 6316.7 6722.5 7079.9 4472.5 3260.55 TRUE FALSE 5830.942884 5993.175285 7007.41947 7352.493617 7261.941729 6674.346095 6274.054291 7018.001181 4937.43238 3664.49155 1.591201072 1.635472535 1.912248773 2.006415765 1.981705137 1.821356661 1.712121369 1.915136407 1.347371747 1 11.83939732 -8.467968155 3.145676269 1.003371172 1.826419337 0.799715932 0.134944627 0.102351977 2.170359193 0.143172044 0.038163546 3.40E-09 8.467968155 0.823048165 RTSS(ph)EDNLYLAVLR ddPTM_A459_MK2206_30min_R2 4 RTSSEDNLYLAVLR 14 1 Q15149-4 Q15149-4 PLEC Plectin 1 RT(0.004)S(0.036)S(0.96)EDNLYLAVLR;RT(0.055)S(0.202)S(0.742)EDNLYLAVLR;RT(0.002)S(0.203)S(0.795)EDNLYLAVLR;RTS(0.043)S(0.956)EDNLYLAVLR 176.44 3.56E-05 30279300 34356.8 74674 57649.7 68140.9 84250.8 86473.2 73726.5 52098.4 96374.2 48020 TRUE FALSE 36987.18302 70965.79775 59571.71222 62573.5705 80942.69027 89763.99822 64046.12199 58907.83976 104756.6537 46453.11133 0.796226172 1.527686644 1.282405215 1.347026468 1.742460041 1.932357072 1.378726207 1.268113977 2.255105217 1 15.50348761 -4.388700787 1.029197044 1.576624369 1.72E-29 0.262185487 0.351976564 5.296795753 2.636769109 0.109413991 11.14313545 4.09E-05 4.388700787 -1.576624369 RTSS(ph)LDTLAAPYLAGHWPR ddPTM_A459_MK2206_30min_R1 1 RTSSLDTLAAPYLAGHWPR 19 1 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 RT(0.053)S(0.334)S(0.384)LDT(0.229)LAAPYLAGHWPR 97.904 0.0010325 6840100 2078.4 2047 2017.3 2206 2058.4 1871.4 1920.2 2117.1 1714.8 1363.3 TRUE FALSE 1901.621166 1913.739928 1880.371297 2375.906502 1976.409569 1977.357051 1792.106962 2098.590418 1893.059596 1532.195896 1.241108379 1.249017787 1.227239481 1.550654527 1.289919634 1.290538015 1.169633051 1.369661949 1.235520602 1 10.58138505 -7.06469806 5.274387686 1.22432693 1.314604227 0.158460082 0.121768438 0.535365767 29.37551495 0.047416249 0.037046385 8.62E-08 7.06469806 0.090277297 RTTSSSGVS(ph)PR ddPTM_A459_MK2206_30min_R2 1 RTTSSSGVSPR 11 1 Q5QP82-2 Q5QP82-2 DCAF10 DDB1- and CUL4-associated factor 10 1 RTTSSSGVS(1)PR 132.14 0.0037136 782390 2411.8 2757.1 2470.1 1970.7 2129.1 3896.8 2451.5 1198.8 2505.8 2957.5 TRUE FALSE 2596.449262 2620.186423 2552.451901 1809.687506 2045.500836 4045.095455 2129.615105 1355.487276 2723.749955 2860.997017 0.90753302 0.915829834 0.892154688 0.632537362 0.714960842 1.413876152 0.744361176 0.473781436 0.95202824 1 11.48230228 -7.429958156 19.03897083 0.748287634 0.906006529 0.04611317 0.234472217 19.47580195 3982.910484 0.100009651 0.067425881 3.72E-08 7.429958156 0.157718895 RTVS(ph)VPSEGQFPEYPPEGATK ddPTM_A459_MK2206_30min_R2 1 RTVSVPSEGQFPEYPPEGATK 21 1 Q9UJF2-2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 RT(0.107)VS(0.786)VPS(0.107)EGQFPEYPPEGATK 80.172 0.0010466 5177500 15661 21331 18263 21128 24474 21586 23158 16546 23277 21993 TRUE FALSE 16860.0182 20271.73356 18871.8793 19401.77481 23513.02779 22407.47036 20117.32678 18708.61901 25301.59138 21275.37021 0.792466502 0.95282636 0.88702942 0.911935944 1.105175964 1.053211772 0.945568824 0.879355744 1.189243296 1 14.37689662 -6.09304408 6.846221926 1.019582014 0.887241689 0.391474388 0.087221927 0.297063557 18.67162209 0.025881861 0.033638903 8.07E-07 6.09304408 -0.132340324 RTVSVPS(ph)EGQFPEYPPEGATK ddPTM_A459_MK2206_30min_R2 1 RTVSVPSEGQFPEYPPEGATK 21 1 Q9UJF2-2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 RT(0.039)VS(0.134)VPS(0.826)EGQFPEY(0.001)PPEGATK 85.798 0.00055243 5090400 12655 22580 14327 20047 25542 21426 20029 17829 20586 19728 TRUE FALSE 13623.87653 21458.71003 14804.65503 18409.09597 24539.09274 22241.38144 17399.16824 20159.31152 22376.53307 19084.27698 0.713879627 1.124418287 0.775751423 0.964621086 1.28582774 1.165429608 0.911701725 1.056330902 1.17251144 1 14.22009691 -6.010803049 24.61898343 1.098150704 0.892244881 0.355200753 0.13809913 512.380001 1167663.872 0.039586142 0.054603426 9.75E-07 6.010803049 -0.205905823 RTYS(ph)DEANQMR ddPTM_A459_MK2206_30min_R1 2 RTYSDEANQMR 11 1 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 RT(0.225)YS(0.775)DEANQMR;RT(0.056)YS(0.944)DEANQMR 188.09 3.49E-05 21295100 6102.2 5970.6 6158.3 5334.2 7903.1 5407.3 6390.4 6646.2 3791.4 3884.9 TRUE FALSE 5583.175846 5581.912855 5740.291754 5745.041008 7588.302792 5713.456653 5964.108076 6588.092974 4185.529598 4366.190741 1.278729258 1.278439992 1.314713922 1.315801656 1.737968687 1.308567809 1.365975155 1.508888036 0.958622709 1 12.09215944 -8.270143533 24.88036761 0.979311256 1.388290693 0.599259779 0.133890737 464.4067267 1327464.917 0.126138665 0.034574099 5.37E-09 8.270143533 0.408979437 RVAAPQDGS(ph)PR ddPTM_A459_MK2206_30min_R2 1 RVAAPQDGSPR 11 1 Q9HD15 Q9HD15 SRA1 Steroid receptor RNA activator 1 1 RVAAPQDGS(1)PR 86.756 0.032419 0 9767 10371 8142.4 8289.3 10990 9482.6 11089 7484.6 8149.9 9842.6 TRUE FALSE 10514.76903 9855.991221 8413.863552 7612.037674 10558.47738 9843.466988 9633.00098 8462.862918 8858.76357 9521.436768 1.104325879 1.035136972 0.883675831 0.799463133 1.1089164 1.033821599 1.011717161 0.888822047 0.930401975 1 13.21696357 -5.01734027 5.37002847 0.957394895 1.091060603 0.243887743 0.083432629 0.233999464 22.09610845 0.022900562 0.075599415 9.61E-06 5.01734027 0.133665708 RVAFISLS(ph)PVR ddPTM_A459_MK2206_30min_R1 1 RVAFISLSPVR 11 1 Q6ZU65-2;Q6ZU65 Q6ZU65-2 UBN2 Ubinuclein-2 1 RVAFIS(0.013)LS(0.987)PVR 91.845 0.013268 14786000 1997.7 2210.4 2030.6 2274.3 2622.5 2026.9 1710.1 1843.3 1430 1171.5 TRUE FALSE 1827.785125 2066.502558 1892.76853 2449.46698 2518.040272 2141.661326 1596.022349 1827.184222 1578.653617 1316.634264 1.388225397 1.569534239 1.437581097 1.860400452 1.912482714 1.626618253 1.212198704 1.387769005 1.199006938 1 10.36263893 -7.252681172 9.211837574 1.231882531 1.644040736 0.587316337 0.176726785 0.151657128 134.5671416 0.074923217 0.055496977 5.59E-08 7.252681172 0.412158205 RVAFISLS(ph)PVR ddPTM_A459_MK2206_30min_R2 2 RVAFISLSPVR 11 1 Q6ZU65-2;Q6ZU65 Q6ZU65-2 UBN2 Ubinuclein-2 1 RVAFISLS(1)PVR;RVAFIS(0.001)LS(0.999)PVR 105.58 0.0059614 16630100 21577.7 39586 32757 40937 41858 41640 41502 26288 36926 31666 TRUE FALSE 23229.7053 37620.2168 33849.10203 37592.31615 40214.4446 43224.63938 36052.73755 29723.93186 40137.75673 30632.74101 0.758329308 1.228104817 1.104997493 1.227194006 1.31279289 1.411060125 1.176934755 0.970332098 1.310289429 1 14.90278684 -4.759299962 24.99999993 1.200888403 0.758328742 0.495031924 0.131672813 48.96070672 571988.8788 0.033452769 0.214385193 1.74E-05 4.759299962 -0.442559661 RVDIIPGFEFDR ddPTM_A459_MK2206_30min_R1 1 RVDIIPGFEFDR 12 1 A6NKB8;Q9H4A4 A6NKB8 RNPEP Aminopeptidase B 0 92.939 0.028388 4029500 1663 1317.4 1316.5 1272.6 1381.7 1454.4 1123.9 1404.4 1517.4 1125.9 FALSE TRUE 1521.553117 1231.637021 1227.139648 1370.615873 1326.663963 1536.746871 1048.926682 1392.121479 1675.13916 1265.384992 1.202442835 0.973329878 0.969775725 1.083161157 1.048427136 1.214450053 0.828938772 1.100156464 1.323817787 1 10.30536067 -8.00524354 24.98055264 1.178601659 1.042136288 0.112863903 0.128655613 375.859638 1790606.962 0.069879874 0.032021733 9.88E-09 8.00524354 -0.136465372 RVES(ph)EESGDEEGK ddPTM_A459_MK2206_30min_R1 1 RVESEESGDEEGK 13 1 B5MBZ8;Q15435-3;Q15435;H7C118;C9JRC4;C9JD73 B5MBZ8 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 RVES(0.996)EES(0.004)GDEEGK 131.86 0.0038993 0 751.01 698.04 866.5 822.47 592 630.94 694.16 582.84 615.17 609.82 TRUE FALSE 687.1326558 652.5974691 807.6843942 885.8167819 568.4193864 666.6632776 647.853853 577.7442913 679.1191229 685.3691055 1.002573139 0.95218396 1.1784663 1.292466752 0.829362429 0.972706929 0.945262703 0.842968098 0.990880852 1 9.420737351 -6.282870367 24.93782436 0.925224042 1.100551518 0.418821603 0.101503117 826.8169279 962109.6586 0.033369848 0.037873084 5.21E-07 6.282870367 0.175327475 RVGDPPQPLPEEPMEVQGAERAS(ph)PEPQR ddPTM_A459_MK2206_30min_R1 2 RVGDPPQPLPEEPMEVQGAERASPEPQR 28 2 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR 69.248 0.00026853 23346700 3064.9 3033 3250.5 2738.5 3307.2 3317.4 3279.5 3169 2594.9 2098.2 TRUE FALSE 2804.214161 2835.551149 3029.865116 2949.419744 3175.467221 3505.228321 3060.730539 3141.293767 2864.649141 2358.140857 1.189163129 1.202451983 1.284853323 1.250739427 1.346597771 1.486437212 1.297942203 1.332106078 1.214791361 1 11.20343418 -8.639947103 3.304537215 1.000092769 1.300842393 0.565576392 0.079116653 0.413421745 9.490682814 0.084541795 0.022355475 2.29E-09 8.639947103 0.300749624 RVGDPPQPLPEEPMEVQGAERAS(ph)PEPQR ddPTM_A459_MK2206_30min_R2 2 RVGDPPQPLPEEPMEVQGAERASPEPQR 28 2 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR 77.641 3.33E-05 72400000 83716 139875 117936 157353 169085 150965 123523 106029 120187 110301 TRUE FALSE 90125.36133 132929.0109 121867.9274 144496.7566 162445.8733 156710.0789 107304.2817 119887.3544 130640.648 106701.8874 0.844646365 1.245798122 1.142134693 1.35420994 1.522427365 1.468672042 1.005645583 1.12357295 1.224351801 1 16.70322617 -7.285155594 24.92989307 1.098690338 1.272647111 0.173743135 0.185260504 1558.792039 1638556.343 0.083263857 0.056172139 5.19E-08 7.285155594 0.173956773 RVHNNS(ph)PDTSR ddPTM_A459_MK2206_30min_R2 1 RVHNNSPDTSR 11 1 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 RVHNNS(0.917)PDT(0.067)S(0.016)R 64.374 0.042884 879070 469.86 0 0 1021.5 630.68 0 494.45 8097.3 3922.8 359.29 TRUE FALSE 505.8328429 0 0 938.0401824 605.9163343 0 429.5281211 9155.644912 4263.998053 347.5663967 1.455356006 0 0 2.698880534 1.743311034 0 1.23581602 26.34214642 12.26815392 1 8.441144797 -7.583510358 24.99999452 10 0.973408181 0.438505113 5.998792739 88.34154405 36424.17854 2.877382976 1.661257763 2.61E-08 7.583510358 -9.026591819 RVNDAEPGS(ph)PEAPQGK ddPTM_A459_MK2206_30min_R1 4 RVNDAEPGSPEAPQGK 16 1 Q8N8A6 Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 1 RVNDAEPGS(1)PEAPQGK;RVNDAEPGS(1)PEAPQGK;RVNDAEPGS(1)PEAPQGK;RVNDAEPGS(1)PEAPQGK 204.9 3.38E-07 167992800 25937.4 24644.8 25505.9 23377 23222.5 22486 22967.1 23857.8 18551.2 16106.36 TRUE FALSE 23731.28793 23040.41904 23774.63057 25177.50059 22297.49865 23759.13789 21435.00666 23649.21377 20479.66363 18101.73747 1.310995034 1.272829146 1.313389425 1.390888616 1.23178776 1.312533558 1.184140843 1.306460985 1.131364525 1 14.14384056 -8.734129975 0.56939927 0.990544966 1.312015722 0.758281652 0.05300764 0.552973672 0.38790002 0.058989529 0.023771715 1.84E-09 8.734129975 0.321470756 RVNDAEPGS(ph)PEAPQGK ddPTM_A459_MK2206_30min_R2 2 RVNDAEPGSPEAPQGK 16 1 Q8N8A6 Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 1 RVNDAEPGS(1)PEAPQGK;RVNDAEPGS(1)PEAPQGK 139.39 0.00072229 122064000 135291 171289 149819 178054 196619 150988 182625 135475 158025 154043 TRUE FALSE 145648.983 162783.0373 154813.8907 163506.4186 188898.7501 156733.9541 158646.1181 153182.0477 171769.7289 149016.5895 0.97740113 1.092381981 1.03890373 1.097236349 1.267635709 1.051788627 1.064620514 1.027952983 1.152688633 1 17.18511342 -3.838565416 1.357478807 1.094498244 1.01E-10 0.166016622 0.07260674 26.89973592 6.102353268 0.021207141 73.47295488 0.000145022 3.838565416 -1.094498244 RVNNGNTAPEDS(ph)SPAKK ddPTM_A459_MK2206_30min_R1 1 RVNNGNTAPEDSSPAKK 17 2 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 RVNNGNTAPEDS(0.982)S(0.018)PAKK 115.56 0.001872 6175400 1075.6 1341.2 1261.6 1329.6 826.19 934.46 1240.3 1008.8 988.6 838.46 TRUE FALSE 984.1145718 1253.887636 1175.966107 1432.006022 793.2811028 987.3683177 1157.56185 999.980168 1091.368508 942.3347549 1.044336492 1.330618052 1.247928192 1.519636217 0.841825157 1.047789347 1.228397705 1.061172967 1.158153726 1 9.880095843 -6.262685866 24.99999271 1.067468845 1.286150213 0.378161761 0.143681539 131.0112268 2627603.32 0.043917118 0.052586888 5.46E-07 6.262685866 0.218681369 RVNNGNTAPEDS(ph)SPAKK ddPTM_A459_MK2206_30min_R2 2 RVNNGNTAPEDSSPAKK 17 2 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 RVNNGNTAPEDS(0.555)S(0.445)PAKK;RVNNGNTAPEDS(0.5)S(0.5)PAKK 57.496 0.027736 9190500 41364 41962 41097 36702 44890 29112 46797 32626 32083 49217 TRUE FALSE 44530.85964 39878.2281 42467.15347 33703.3292 43127.39305 30219.87756 40652.49769 36890.33022 34873.52135 47611.05332 0.935305072 0.837583404 0.891959965 0.707888754 0.905827324 0.634723986 0.853845795 0.774827013 0.732466915 1 15.53900893 -4.844304485 1.049216996 0.793363106 0.982425935 0.110653184 0.10145562 3.17252159 3.04728912 0.030702825 0.658617236 1.43E-05 4.844304485 0.189062829 RVNNGNTAPEDSS(ph)PAK ddPTM_A459_MK2206_30min_R1 1 RVNNGNTAPEDSSPAK 16 1 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 RVNNGNTAPEDS(0.132)S(0.868)PAK 102.57 0.0063313 0 2996.2 3271.9 3118.5 2818.4 3592.8 2881.6 3388.2 3511.2 2401.9 1652.2 TRUE FALSE 2741.357456 3058.898715 2906.824909 3035.473656 3449.691168 3044.753702 3162.17936 3480.501949 2651.5861 1856.887009 1.476318937 1.647326251 1.565429072 1.634711019 1.857781949 1.639708656 1.702946568 1.874374655 1.427973854 1 10.85867032 -8.563222319 5.928505455 1.000052423 1.674030156 0.769491684 0.113659018 0.137156659 18.14853918 0.112095245 0.029059038 2.73E-09 8.563222319 0.673977733 RVNNGNTAPEDSS(ph)PAK ddPTM_A459_MK2206_30min_R2 2 RVNNGNTAPEDSSPAK 16 1 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 RVNNGNTAPEDS(0.217)S(0.783)PAK;RVNNGNTAPEDS(0.367)S(0.633)PAK 104.45 0.001982 6629600 19538.2 23649.6 23875.8 19651.3 24024.7 16855.9 26980 19901.8 18964.4 24429.5 TRUE FALSE 21034.05961 22475.19525 24671.80726 18045.72593 23081.36956 17497.36309 23437.49359 22503.03359 20613.88923 23632.36742 0.890053004 0.951034438 1.043983737 0.763602123 0.97668461 0.740398233 0.991753944 0.952212413 0.872273559 1 14.52847654 -10.51305384 7.18480489 1.000000004 0.910754638 0.080553872 0.091969217 7.03E-09 1.06E-09 0.085513919 0.020740171 3.07E-11 10.51305384 -0.089245367 RVNNGNTAPEDSS(ph)PAKK ddPTM_A459_MK2206_30min_R2 2 RVNNGNTAPEDSSPAKK 17 2 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 RVNNGNTAPEDS(0.217)S(0.783)PAKK;RVNNGNTAPEDS(0.018)S(0.982)PAKK 109.28 0.0025458 8004200 15935.7 15375.7 15612.2 14353.5 16653.9 11222.4 16994.4 11390 12057 17068.1 TRUE FALSE 17155.74944 14612.1651 16132.70296 13180.77314 15999.98421 11649.4763 14763.01487 12878.71211 13105.69607 16511.16929 1.039039037 0.884986692 0.977078163 0.798294349 0.969040043 0.70555126 0.894122918 0.780000003 0.793747301 1 14.01115467 -3.635944738 0.578305552 0.835478009 1.61620323 0.249110459 0.091559379 16.11178153 1.485176847 0.041475326 11.32191896 0.000231236 3.635944738 0.780725221 RVNS(ph)GDTEVGSSLLR ddPTM_A459_MK2206_30min_R2 1 RVNSGDTEVGSSLLR 15 1 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 RVNS(0.989)GDT(0.011)EVGSSLLR 119.47 0.0034185 3526300 9345.6 21265 14324 14717 18479 12837 13203 9942.5 12590 10327 TRUE FALSE 10061.10632 20209.01102 14801.55501 13514.57402 17753.42161 13325.52103 11469.43024 11242.01889 13685.05544 9990.030836 1.007114641 2.022917782 1.481632565 1.352806037 1.777113795 1.333881872 1.148087571 1.125323742 1.369871191 1 13.28627342 -6.983996713 7.72099351 1.180579077 1.545212739 0.303050703 0.26176334 0.193182244 61.44486186 0.089300768 0.077171993 1.04E-07 6.983996713 0.364633662 RVPGSS(ph)GR ddPTM_A459_MK2206_30min_R2 1 RVPGSSGR 8 1 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 RVPGS(0.238)S(0.762)GR 63.694 0.045994 8095500 5341.9 2470.1 3490.3 4210.7 4399.8 4036 4236.6 15268 14180 6789.7 TRUE FALSE 5750.879971 2347.438426 3606.66486 3866.672341 4227.041745 4189.592808 3680.329331 17263.58002 15413.35077 6568.152645 0.87557039 0.357397057 0.549114044 0.588700134 0.643566307 0.637864714 0.560329446 2.628376799 2.346679744 1 12.68127194 -7.750096275 24.99922846 2.115646163 0.592856239 0.701805337 0.412782135 95.89799973 211352.051 0.184232161 0.105152728 1.78E-08 7.750096275 -1.522789925 RVPLS(ph)PLSLLAGPADAR ddPTM_A459_MK2206_30min_R1 2 RVPLSPLSLLAGPADAR 17 1 Q53ET0;H0YDQ8;Q5T4K5 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 1 RVPLS(0.96)PLS(0.04)LLAGPADAR;RVPLS(0.998)PLS(0.002)LLAGPADAR 104.45 0.0014249 12913400 4462.1 4449.6 4066.9 4150.7 4783 3808.2 3950.9 3923.8 3436.9 2962.8 TRUE FALSE 4082.574964 4159.930231 3790.850159 4470.387633 4592.482982 4023.816993 3687.34267 3889.49463 3794.178054 3329.854032 1.226052231 1.249283059 1.138443344 1.342517597 1.379184474 1.208406421 1.107358651 1.168067607 1.139442756 1 11.70124322 -8.175987675 0.701416371 1.012893545 1.25944658 0.54229515 0.071752981 0.569985619 0.616754932 0.076361068 0.032841249 6.67E-09 8.175987675 0.246553034 RVPLS(ph)PLSLLAGPADAR ddPTM_A459_MK2206_30min_R2 2 RVPLSPLSLLAGPADAR 17 1 Q53ET0;H0YDQ8;Q5T4K5 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 1 RVPLS(0.992)PLS(0.008)LLAGPADAR;RVPLS(0.999)PLS(0.001)LLAGPADAR 68.406 0.018812 12840600 13618.5 28353 17637.6 22938 26623 27147 23197 13432 22511 18563 TRUE FALSE 14661.14283 26945.03125 18225.62878 21063.89202 25577.64725 28180.09811 20151.20604 15187.60852 24468.96609 17957.29083 0.81644514 1.50050648 1.01494312 1.172999437 1.424360027 1.569284497 1.122174064 0.845762797 1.362620137 1 14.13228209 -7.508861537 24.87717543 1.059308553 1.262495156 0.103687104 0.242144306 1292.788372 2294401.649 0.103196249 0.06645334 3.10E-08 7.508861537 0.203186604 RVPPPALS(ph)R ddPTM_A459_MK2206_30min_R1 4 RVPPPALSR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R 80.17 0.024173 44719000 10571.6 10242.6 10048.9 7712.6 10160 9503.4 13407.9 10996.8 9610.1 10227.6 TRUE FALSE 9672.429906 9575.804878 9366.808666 8306.625788 9755.305686 10041.4743 12513.48346 10900.65614 10609.10429 11494.6723 0.841470696 0.833064626 0.814882619 0.722650074 0.848680626 0.873576387 1.088633336 0.948322479 0.922958394 1 13.48867772 -6.998560903 3.611141129 0.986364789 0.809818518 0.715879169 0.05256821 0.130594 3.682790118 0.020963979 0.017171833 1.00E-07 6.998560903 -0.176546271 RVPPPALS(ph)R ddPTM_A459_MK2206_30min_R2 4 RVPPPALSR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R 83.226 0.020198 56963100 76871.4 85269 81737 92779 81737.5 79434 96736 74125.8 81745.7 77556.2 TRUE FALSE 82756.73349 81034.66545 84462.07078 85198.65891 78528.07505 82456.91653 84034.447 83814.29657 88855.79322 75025.54755 1.103047378 1.080094289 1.125777466 1.135595297 1.046684464 1.09905118 1.120077757 1.117143417 1.184340483 1 16.19509432 -7.244697989 18.5218854 1.115152323 1.098131849 0 0.048208161 133.5659603 147769.5139 0.017793464 0.013683287 5.69E-08 7.244697989 -0.017020474 RVPPPALS(ph)RDR ddPTM_A459_MK2206_30min_R1 1 RVPPPALSRDR 11 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RVPPPALS(1)RDR 85.271 0.039685 8749400 1613.5 1590.8 1707.4 1887.8 1798.6 1528.6 1566.9 1996.3 1177.9 898.68 TRUE FALSE 1476.263352 1487.238631 1591.506445 2033.198683 1726.957953 1615.148011 1462.37496 1978.84656 1300.34692 1010.015263 1.461624795 1.472491244 1.575725143 2.013037582 1.709833521 1.599132281 1.44787412 1.959224412 1.287452742 1 9.980161379 -8.507324191 6.624194048 1.000167348 1.650400872 0.569414128 0.186304908 0.098305943 21.84246733 0.185360234 0.047985076 3.11E-09 8.507324191 0.650233524 RVPS(ph)INQK ddPTM_A459_MK2206_30min_R2 1 RVPSINQK 8 1 Q92834-2;Q92834;A0A2R8YFT6;Q92834-4 Q92834-2 RPGR X-linked retinitis pigmentosa GTPase regulator 1 RVPS(1)INQK 68.786 0.038923 10463000 49524 63129 49268 55174 52721 49568 59473 46864 50502 50413 TRUE FALSE 53315.59552 59994.10566 50910.57053 50666.10771 50650.90864 51454.34497 51664.12366 52989.28571 54894.57267 48768.02794 1.093248954 1.230193391 1.043933345 1.038920577 1.038608916 1.055083569 1.059385131 1.086557894 1.125626255 1 15.57364801 -5.28169907 24.98729472 1.057960822 1.161721179 0.483359222 0.043677063 570.1737006 703223.1137 0.011087728 0.023122396 5.23E-06 5.28169907 0.103760357 RVPS(ph)PTPAPK ddPTM_A459_MK2206_30min_R1 6 RVPSPTPAPK 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RVPS(0.989)PT(0.011)PAPK;RVPS(0.961)PT(0.039)PAPK;RVPS(0.987)PT(0.013)PAPK;RVPS(0.991)PT(0.009)PAPK;RVPS(0.987)PT(0.013)PAPK;RVPS(0.994)PT(0.006)PAPK 140.45 0.0025434 2297630000 70089.2 72118.9 73227.6 62751.2 68460.7 58957.4 70481.8 66885.8 60972.9 54835.4 TRUE FALSE 64127.74549 67423.9465 68257.11454 67584.3083 65733.76535 62295.51704 65780.08772 66301.0245 67311.25115 61628.82334 1.040547945 1.094032676 1.107551805 1.096634734 1.066607503 1.010817888 1.067359137 1.075811948 1.092204061 1 15.91131763 -6.516006186 24.77273646 1.053287535 1.086320516 0.22014835 0.030943245 478.339634 1724226.534 0.010227196 0.010614176 3.05E-07 6.516006186 0.033032982 RVPS(ph)PTPAPK ddPTM_A459_MK2206_30min_R2 5 RVPSPTPAPK 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RVPS(1)PTPAPK;RVPS(0.964)PT(0.036)PAPK;RVPS(0.993)PT(0.007)PAPK;RVPS(0.997)PT(0.003)PAPK;RVPS(0.995)PT(0.005)PAPK 132.5 0.0043626 1552906000 897248 1124199 996386 1049100 994725 877778 1065925 886373 849080 998244 TRUE FALSE 965941.9967 1068372.912 1029605.012 963385.1741 955667.0984 911182.4569 925967.7671 1002224.994 922931.4436 965671.38 1.000280237 1.106352466 1.066206406 0.997632522 0.989640076 0.943574052 0.958884965 1.037853058 0.955740703 1 19.88117279 -5.84110284 3.963728827 0.980932094 1.062842948 0.492258139 0.034731566 0.173628942 5.23615306 0.009921213 0.015642172 1.44E-06 5.84110284 0.081910854 RVPSPTPAPK ddPTM_A459_MK2206_30min_R2 1 RVPSPTPAPK 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 107.11 0.012538 0 26540 30146 23839 29776 32620 28163 31920 31477 25257 29185 FALSE TRUE 28571.92281 28648.99348 24633.78036 27343.20555 31339.1749 29234.7627 27728.86566 35591.15198 27453.80821 28232.69584 1.012015394 1.014745232 0.87252668 0.96849432 1.110031259 1.035493134 0.982154372 1.260635972 0.972411858 1 14.78507927 -6.24133309 20.86871479 1.06802312 0.963615334 0.21546206 0.086222084 140.9998248 146344.2255 0.025073254 0.032281361 5.74E-07 6.24133309 -0.104407786 RVPTTLSIKPLGAIS(ph)PVLNR ddPTM_A459_MK2206_30min_R1 1 RVPTTLSIKPLGAISPVLNR 20 2 Q8NEN9 Q8NEN9 PDZD8 PDZ domain-containing protein 8 1 RVPTTLSIKPLGAIS(1)PVLNR 51.938 0.024457 10386000 4225.2 4144.7 4141.6 3895.9 4332.5 4222.7 4062.7 4076.5 3675.9 3533.5 TRUE FALSE 3865.824553 3874.879277 3860.479731 4195.962893 4159.927351 4461.785625 3791.684696 4040.85959 4058.022959 3971.256657 0.973451199 0.975731264 0.972105322 1.056583156 1.047509066 1.123519835 0.954782081 1.017526677 1.021848576 1 11.95537989 -5.748644652 24.97523327 1.033693576 0.973959435 0.297666854 0.040687036 292.8067205 571552.1439 0.011490297 0.019732195 1.78E-06 5.748644652 -0.05973414 RVQS(ph)LPSVPLSCAAYR ddPTM_A459_MK2206_30min_R1 1 RVQSLPSVPLSCAAYR 16 1 Q96AD5-2;Q96AD5 Q96AD5-2 PNPLA2 Patatin-like phospholipase domain-containing protein 2 1 RVQS(0.998)LPS(0.002)VPLSCAAYR 89.353 0.0067874 7600200 831.28 1053.1 1255.8 1051.5 1482.2 969.85 1095.2 1141.9 603.52 682.56 TRUE FALSE 760.5752708 984.5429986 1170.559795 1132.486712 1423.160835 1024.762069 1022.141206 1131.916489 666.2580637 767.1206859 0.991467555 1.283426476 1.525913479 1.476282328 1.855198095 1.335855085 1.332438592 1.475538999 0.868517922 1 9.583309755 -8.260620435 24.94364423 0.934258914 1.421249204 0.454300423 0.208031952 64.31932296 1959226.931 0.169958444 0.055571259 5.49E-09 8.260620435 0.48699029 RVS(ph)EVEEEKEPVPQPLPSDDTR ddPTM_A459_MK2206_30min_R1 2 RVSEVEEEKEPVPQPLPSDDTR 22 2 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 RVS(0.998)EVEEEKEPVPQPLPS(0.002)DDTR;RVS(0.999)EVEEEKEPVPQPLPS(0.001)DDTR 92.499 0.00035655 91342000 4142.4 5251.1 4244.3 3133.4 3074.73 2652.45 3827.5 3670 4890.5 4561.1 TRUE FALSE 3790.067127 4909.252436 3956.208741 3374.735011 2952.256993 2802.629427 3572.174459 3637.913577 5398.884976 5126.163503 0.739357441 0.957685496 0.771767958 0.658335422 0.575919397 0.546730401 0.696851448 0.709675681 1.053201868 1 12.32366378 -8.258012315 24.08898817 1.026600973 0.705875315 0.587194189 0.107171845 132.343571 930278.1947 0.091754004 0.031440612 5.52E-09 8.258012315 -0.320725659 RVS(ph)EVEEEKEPVPQPLPSDDTR ddPTM_A459_MK2206_30min_R2 4 RVSEVEEEKEPVPQPLPSDDTR 22 2 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 RVS(1)EVEEEKEPVPQPLPSDDTR;RVS(1)EVEEEKEPVPQPLPSDDTR;RVS(1)EVEEEKEPVPQPLPSDDTR;RVS(1)EVEEEKEPVPQPLPSDDTR 79.383 0.00051376 201301600 666130 557797 587507 499424 404381 383948 585505 453881 366901 533161 TRUE FALSE 717129.425 530097.6121 607094.1902 458619.4616 388502.9701 398559.4102 508627.4902 513204.8051 398813.3858 515764.0002 1.390421636 1.027791028 1.177077481 0.889204096 0.753257245 0.772755388 0.986163226 0.99503805 0.773247814 1 18.97635155 -4.45866749 0.826958179 0.88005229 1.886354729 0.6250331 0.115450046 2.674209819 0.980021627 0.043969459 2.788134046 3.48E-05 4.45866749 1.006302438 RVS(ph)FADPIYQAGLADDIDRR ddPTM_A459_MK2206_30min_R2 2 RVSFADPIYQAGLADDIDRR 20 2 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RVS(0.884)FADPIY(0.116)QAGLADDIDRR;RVS(0.995)FADPIY(0.005)QAGLADDIDRR 82.774 0.0035869 5806600 15724.4 16991.9 14139.9 18340.7 16020.8 18827.8 13934.2 11955.7 12195.7 12964.2 TRUE FALSE 16928.27215 16148.10695 14611.31721 16842.20614 15391.74289 19544.30512 12104.6228 13518.35104 13256.45994 12541.17922 1.349815026 1.287606745 1.165067252 1.342952353 1.227296304 1.55841048 0.965190162 1.077917061 1.057034567 1 13.61438539 -7.288667057 24.99958211 1.031528505 1.309834903 0.675787185 0.100472243 472.4285399 433766.7169 0.041398098 0.02791842 5.14E-08 7.288667057 0.278306398 RVS(ph)HSPPPK ddPTM_A459_MK2206_30min_R1 1 RVSHSPPPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RVS(0.679)HS(0.321)PPPK 79.036 0.025649 1364100 2122.6 2202.5 1709 1883.1 1285.7 1244.4 1961.2 2240.7 398.05 1509.4 TRUE FALSE 1942.061724 2059.11685 1592.997842 2028.136688 1234.487846 1314.856853 1830.371926 2221.109796 439.4287219 1696.395867 1.144816349 1.213818596 0.93904841 1.195556254 0.727712128 0.775088455 1.078976884 1.309311016 0.259036661 1 10.72825716 -6.249926856 24.49931163 0.880687586 1.116613277 0.189666257 0.265759344 1119.858777 2383121.971 0.077808276 0.099512897 5.62E-07 6.249926856 0.235925691 RVS(ph)HSPPPKQR ddPTM_A459_MK2206_30min_R1 1 RVSHSPPPKQR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RVS(0.999)HS(0.001)PPPKQR 73.067 0.023005 429480 353.65 265.27 50.563 359.39 207.85 0 159.23 457.85 0 0 TRUE FALSE 323.5702104 248.0008748 47.13092444 387.0702801 199.5708944 0 148.6080572 453.8470657 0 0 0 RVS(ph)LSEIGFGK ddPTM_A459_MK2206_30min_R1 2 RVSLSEIGFGK 11 1 E5RJM2;E5RGN0;Q00536;Q00536-3;Q00536-2;A0A087WZU2;H0YBX5 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 RVS(0.956)LS(0.044)EIGFGK;RVS(0.997)LS(0.003)EIGFGK 130.47 0.0012261 130306000 23352 24073 25091 21165.4 25454 23770 27120 24837 23836 21589.5 TRUE FALSE 21365.78977 22505.84332 23387.89283 22795.56278 24440.11328 25115.83686 25310.87428 24619.85273 26313.8375 24264.17025 0.880548956 0.927534018 0.963885951 0.939474235 1.007251145 1.035099762 1.043137846 1.014658753 1.084473 1 14.56653991 -5.834316762 0.699525834 1.043154172 0.881768072 0.802685961 0.025864217 0.435433522 0.379484343 0.013741074 0.0456341 1.46E-06 5.834316762 -0.1613861 RVS(ph)LSEIGFGK ddPTM_A459_MK2206_30min_R2 2 RVSLSEIGFGK 11 1 E5RJM2;E5RGN0;Q00536;Q00536-3;Q00536-2;A0A087WZU2;H0YBX5 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 RVS(0.999)LS(0.001)EIGFGK;RVS(0.984)LS(0.016)EIGFGK 145.7 0.00035791 81281000 447950 423460 411790 475240 493990 439590 604330 407520 444110 496100 TRUE FALSE 482245.3964 402431.5922 425518.8731 436411.3718 474593.4705 456318.9055 524980.7451 460784.2632 482737.885 479912.2976 1.004861511 0.838552365 0.886659657 0.909356509 0.988917085 0.950838117 1.093909757 0.960142646 1.005887716 1 18.87241126 -6.389847953 1.900089826 1.006676989 0.90090156 0.409863984 0.052727078 0.320135446 2.28703381 0.018555287 0.022151463 4.08E-07 6.389847953 -0.105775429 RVS(ph)LTQR ddPTM_A459_MK2206_30min_R2 1 RVSLTQR 7 1 Q96I34 Q96I34 PPP1R16A Protein phosphatase 1 regulatory subunit 16A 1 RVS(0.995)LT(0.005)QR 70.056 0.034897 4608700 2970 3292.1 2930.8 2845.7 3047.3 4008.3 4205.4 2236.4 4548.9 3556.4 TRUE FALSE 3197.385484 3128.619101 3028.511409 2613.197207 2927.647691 4160.838665 3653.225928 2528.705159 4944.555099 3440.354959 0.929376626 0.909388461 0.88029039 0.759571974 0.850972567 1.209421328 1.061874711 0.735012866 1.437222367 1 11.74834171 -6.736679983 24.94614888 1.070467595 0.863224956 0.297437362 0.170023246 306.654228 308966.5464 0.054503439 0.054480249 1.83E-07 6.736679983 -0.207242639 RVS(ph)LVGADDLR ddPTM_A459_MK2206_30min_R1 2 RVSLVGADDLR 11 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 RVS(1)LVGADDLR;RVS(1)LVGADDLR 116.58 0.003001 25680000 4725.5 5522.5 5322.8 5277.2 6109.7 6470.1 6850.3 5410.3 5688.6 5428.7 TRUE FALSE 4323.57141 5162.984246 4961.503166 5683.650858 5866.337711 6836.431471 6393.328986 5362.998318 6279.950327 6101.248341 0.708637179 0.846217685 0.813194758 0.931555403 0.96149794 1.120497165 1.047872276 0.879000168 1.029289414 1 12.57488874 -5.802050158 1.410353902 1.010303767 0.767306561 0.699421669 0.06441854 0.261113618 1.047701167 0.022971637 0.051809907 1.58E-06 5.802050158 -0.242997207 RVS(ph)LVGADDLR ddPTM_A459_MK2206_30min_R2 2 RVSLVGADDLR 11 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 RVS(1)LVGADDLR;RVS(1)LVGADDLR 101.72 0.0076958 5554200 27019 24379 26061 25011 27659 34151 37415 20490.4 36107 25853 TRUE FALSE 29087.59541 23168.37431 26929.86073 22967.52129 26572.96868 35450.64024 32502.36556 23168.56563 39247.52159 25009.41873 1.163065633 0.926385957 1.07678875 0.918354862 1.062518445 1.417491571 1.299604997 0.926393607 1.569309628 1 14.61018391 -6.563361952 14.19384993 1.241395155 1.014864665 0.251068909 0.185030977 2.587234295 905.2708439 0.057833151 0.05784073 2.73E-07 6.563361952 -0.22653049 RVS(ph)PLNLSSVTP ddPTM_A459_MK2206_30min_R1 4 RVSPLNLSSVTP 12 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 RVS(0.987)PLNLS(0.013)SVTP;RVS(0.83)PLNLS(0.169)S(0.001)VTP;RVS(0.89)PLNLS(0.11)SVTP;RVS(0.998)PLNLS(0.002)SVTP 138.2 0.0022633 390629000 22079.7 21579.6 21498.6 17293.2 21652.9 20457.1 22861.2 19902.7 17732.2 16749.1 TRUE FALSE 20201.70557 20174.76412 20039.33493 18625.12526 20790.41914 21615.36332 21336.17106 19728.69279 19575.52565 18824.10496 1.073182795 1.071751574 1.064557118 0.989429527 1.104457247 1.148281067 1.133449431 1.048054759 1.039918004 1 14.20029365 -4.770898388 13.85411842 1.07149759 1.07318321 0 0.04925669 56.6166476 84365.56614 0.013057993 0.058207533 1.69E-05 4.770898388 0.001685619 RVS(ph)PLNLSSVTP ddPTM_A459_MK2206_30min_R2 2 RVSPLNLSSVTP 12 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 RVS(0.999)PLNLS(0.001)SVTP;RVS(0.747)PLNLS(0.248)S(0.004)VTP 126.34 0.004935 36729000 141150 166690 150839 185998 187481 187447 192382 150087 179297 178327 TRUE FALSE 151956.5525 158412.417 155867.897 170801.3684 180119.5539 194580.4269 167122.0123 169703.8862 194891.929 172508.2046 0.880865654 0.918289176 0.903539037 0.990105768 1.044121666 1.127948827 0.968777182 0.983743855 1.129754549 1 17.39630545 -5.90645501 2.666774354 1.041683363 0.900239865 0.601851983 0.051411491 0.194963053 2.807628009 0.015791698 0.025436139 1.24E-06 5.90645501 -0.141443498 RVS(ph)SDEEHTVDSCISDMK ddPTM_A459_MK2206_30min_R2 1 RVSSDEEHTVDSCISDMK 18 1 Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150;H7C183 Q70CQ2-3 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 RVS(0.499)S(0.499)DEEHT(0.001)VDSCISDMK 74.147 0.0084773 3900500 13362 14735 14168 14625 13605 11126 14249 14925 13500 14767 TRUE FALSE 14385.00499 14003.28133 14640.35405 13430.09072 13070.79934 11549.40773 12378.08918 16875.74875 14674.2056 14285.154 1.006989844 0.980268139 1.024864979 0.940143223 0.91499184 0.80849025 0.866500227 1.181348745 1.02723468 1 13.80222897 -7.752760219 24.9999657 1.078218796 0.93444246 0.405192893 0.074688473 185.3995029 534039.7148 0.038804042 0.021962085 1.77E-08 7.752760219 -0.143776336 RVS(ph)SDLQHATAQLSLEHR ddPTM_A459_MK2206_30min_R2 2 RVSSDLQHATAQLSLEHR 18 1 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 RVS(0.5)S(0.5)DLQHATAQLSLEHR;RVS(0.785)S(0.214)DLQHATAQLSLEHR 65.949 0.022256 10780800 19144.1 30956 25208.5 25048.2 28030 27608 30372 21787.9 22270.1 23362.7 TRUE FALSE 20609.78702 29418.77005 26048.93881 23001.68193 26929.40136 28658.64179 26384.11992 24635.65334 24207.11304 22600.37701 0.911922266 1.301693774 1.152588684 1.017756559 1.191546555 1.268060341 1.16741946 1.090054972 1.071093329 1 14.46405922 -8.310693776 1.721580266 1.007366885 1.151013151 0.146756275 0.107216267 0.633114114 3.641712563 0.099275485 0.029314266 4.89E-09 8.310693776 0.143646266 RVS(ph)SSAGNAAVIK ddPTM_A459_MK2206_30min_R2 2 RVSSSAGNAAVIK 13 1 Q9ULD2-2 Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RVS(0.919)S(0.057)S(0.023)AGNAAVIK;RVS(0.965)S(0.033)S(0.003)AGNAAVIK 128.74 0.0032252 19094000 106687 116910 108443 105033 70343 83601 93183 80229 65768 90145 TRUE FALSE 114855.0387 111104.4194 112058.4355 96451.46792 67580.98037 86782.49464 80947.96017 90715.20577 71488.38176 87203.57603 1.317090926 1.274081001 1.285021103 1.106049457 0.774979461 0.995171283 0.928264228 1.040269332 0.819787273 1 16.41209968 -5.954456748 3.606086473 0.931377851 1.288737089 0.816120589 0.07775754 0.090233825 2.452536068 0.022021239 0.033134224 1.11E-06 5.954456748 0.357359238 RVS(ph)SSSELDLPSGDHCEAGLLQLDVPLLR ddPTM_A459_MK2206_30min_R1 1 RVSSSSELDLPSGDHCEAGLLQLDVPLLR 29 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 RVS(0.269)S(0.269)S(0.269)S(0.192)ELDLPSGDHCEAGLLQLDVPLLR 81.151 1.69E-05 9169300 1807 1615.8 1859.6 1927.2 2055.4 1728.7 1744.6 1575 1157.4 1679.3 TRUE FALSE 1653.305161 1510.611126 1733.375533 2075.633278 1973.529066 1826.5775 1628.220917 1561.229941 1277.715872 1887.344362 0.875995496 0.800389773 0.918420384 1.099763943 1.045664535 0.967802981 0.862704735 0.8272099 0.676991384 1 10.88214196 -10.86794645 6.065390239 1.000010196 0.904317225 0.063574637 0.11548378 1.77E-05 1.91E-06 0.124337758 0.030153123 1.36E-11 10.86794645 -0.095692971 RVS(ph)SVPSR ddPTM_A459_MK2206_30min_R2 1 RVSSVPSR 8 1 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 RVS(0.677)S(0.322)VPSR 66.92 0.04151 3831200 8079.1 12965 8112.3 11485 12455 14083 9732.6 8634.8 13655 9707.4 TRUE FALSE 8697.642108 12321.17695 8382.760033 10546.63876 11965.95412 14618.93843 8454.697929 9763.398008 14842.68722 9390.648333 0.926202515 1.312068828 0.892671063 1.123100172 1.274241532 1.556754967 0.900331652 1.03969371 1.580581733 1 13.19700905 -4.741443931 24.34309905 1.182035113 0.926201273 0.100485475 0.233371973 2643.030086 3217475.297 0.057718857 2.173061993 1.81E-05 4.741443931 -0.25583384 RVS(ph)TDLPEGQDVYTAACNSVIHR ddPTM_A459_MK2206_30min_R1 1 RVSTDLPEGQDVYTAACNSVIHR 23 1 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 RVS(0.728)T(0.272)DLPEGQDVYTAACNSVIHR 107.7 9.66E-06 10944000 1129.3 814.54 1232.9 654.37 1074.9 1048 1332.4 826.25 682.83 793.52 TRUE FALSE 1033.247105 761.513298 1149.214183 704.7696908 1032.084457 1107.336854 1243.518027 819.0261834 753.812622 891.8272484 1.15857315 0.853879829 1.288606269 0.790253597 1.157269481 1.241649497 1.394348546 0.918368647 0.845245112 1 9.800620469 -7.946896084 24.99996519 0.909011006 1.117790106 0.218244006 0.177059212 141.3563362 66546.546 0.098074189 0.047113302 1.13E-08 7.946896084 0.2087791 RVS(ph)TDLPEGQDVYTAACNSVIHR ddPTM_A459_MK2206_30min_R2 2 RVSTDLPEGQDVYTAACNSVIHR 23 1 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 RVS(0.776)T(0.224)DLPEGQDVYTAACNSVIHR;RVS(0.5)T(0.5)DLPEGQDVYTAACNSVIHR 147.85 5.99E-08 16984000 33412 49436 37657 50499 54245 57617 49958 35250 48926 45768 TRUE FALSE 35970.04841 46981.08013 38912.46559 46373.07016 52115.06874 59809.65531 43398.45459 39857.29603 53181.49504 44274.59391 0.812430905 1.061129555 0.878889271 1.047396849 1.177087448 1.350879817 0.98021124 0.900229511 1.20117409 1 15.43419145 -5.93223952 5.292568677 1.103894334 0.933383485 0.273713486 0.133220822 0.30344586 16.08504084 0.039863938 0.059723772 1.17E-06 5.93223952 -0.170510849 RVS(ph)VCAETYNPDEEEEDTDPR ddPTM_A459_MK2206_30min_R1 3 RVSVCAETYNPDEEEEDTDPR 21 1 P13861;P13861-2 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 1 RVS(0.989)VCAET(0.01)YNPDEEEEDT(0.001)DPR;RVS(0.997)VCAET(0.002)YNPDEEEEDTDPR;RVS(1)VCAETYNPDEEEEDTDPR 132.81 2.32E-05 300371000 7914 7962.7 8235.6 7058.2 8035.7 6667.3 7465.9 7463.9 7088 5801.6 TRUE FALSE 7240.872742 7444.326783 7676.590418 7601.823787 7715.621053 7044.796764 6967.863433 7398.643909 7824.822965 6520.346008 1.110504371 1.141707323 1.177328689 1.165862023 1.183314665 1.080432964 1.068634 1.134701119 1.200062536 1 12.67073281 -6.763787478 24.99507596 1.103426685 1.156724958 0.243374094 0.051312561 106.307662 1131611.918 0.017845739 0.016493619 1.72E-07 6.763787478 0.053298273 RVS(ph)VCAETYNPDEEEEDTDPR ddPTM_A459_MK2206_30min_R2 3 RVSVCAETYNPDEEEEDTDPR 21 1 P13861;P13861-2 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 1 RVS(0.998)VCAET(0.002)YNPDEEEEDTDPR;RVS(1)VCAETYNPDEEEEDTDPR;RVS(0.992)VCAET(0.008)YNPDEEEEDTDPR 164.48 8.64E-09 498920000 42846.4 58258 45118.3 55721 46087.8 43552.8 50076.1 42073.9 46295.8 46248.7 TRUE FALSE 46126.75333 55364.99244 46622.5216 51168.41606 44278.1614 45210.23232 43501.04792 47573.10319 50322.525 44739.60871 1.031004845 1.23749389 1.042086039 1.143693866 0.989685933 1.010519171 0.972316236 1.063333019 1.124786882 1 15.44926502 -6.25746835 24.98647884 1.026404607 1.117315419 0.288205285 0.06671867 438.2904645 2757802.372 0.019684665 0.024441795 5.53E-07 6.25746835 0.090910812 RVS(ph)VELTNSLFK ddPTM_A459_MK2206_30min_R1 2 RVSVELTNSLFK 12 1 P14923 P14923 JUP Junction plakoglobin 1 RVS(1)VELTNSLFK;RVS(1)VELTNSLFK 123.76 0.0016524 34923000 11325.1 13328.6 12834.1 11059.9 13115 11389 13770.1 11610.5 13490.8 14884 TRUE FALSE 10361.84077 12460.90572 11962.95705 11911.73541 12592.60178 12033.83534 12851.52175 11508.99062 14893.21694 16727.94229 0.619433078 0.744915633 0.715148154 0.712086114 0.752788452 0.719385273 0.768266744 0.688009943 0.890319723 1 14.02997237 -8.45117138 3.210171552 0.998651475 0.719078781 0.850046808 0.03983453 0.075998576 1.586709297 0.03655274 0.009738138 3.54E-09 8.45117138 -0.279572693 RVS(ph)VELTNSLFK ddPTM_A459_MK2206_30min_R2 1 RVSVELTNSLFK 12 1 P14923 P14923 JUP Junction plakoglobin 1 RVS(1)VELTNSLFK 116.78 0.0025298 5733200 85932 88575 86019 96467 80081 91557 100530 75461 92942 97144 TRUE FALSE 92511.01999 84176.4943 88886.83053 88585.33752 76936.61757 95041.26579 87330.29024 85324.0118 101025.9272 93974.19924 0.98442999 0.89574048 0.945864197 0.942655944 0.818699368 1.011354889 0.929300712 0.907951464 1.075038979 1 16.5199771 -8.255948522 24.96869545 1.037519493 0.928386889 0.409880005 0.051831062 380.3877117 1729765.923 0.035726887 0.012646136 5.55E-09 8.255948522 -0.109132604 RVSEVEEEKEPVPQPLPS(ph)DDTR ddPTM_A459_MK2206_30min_R1 1 RVSEVEEEKEPVPQPLPSDDTR 22 2 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 RVS(0.393)EVEEEKEPVPQPLPS(0.503)DDT(0.104)R 67.655 0.0064062 24547000 2531.5 3238.6 2513.2 1503 1441.8 1930.9 2359.3 1796.6 2982.7 2871.9 TRUE FALSE 2316.182632 3027.766551 2342.610986 1618.76132 1384.370053 2040.225889 2201.915402 1780.892516 3292.762339 3227.692654 0.717597021 0.938059126 0.725785023 0.501522758 0.428903927 0.632100422 0.68219488 0.551754057 1.020159814 1 11.65628749 -8.270028708 24.56282361 1.010080017 0.648077259 0.545674834 0.132429909 471.7976566 1349174.374 0.136351615 0.037503616 5.37E-09 8.270028708 -0.362002758 RVSPLNLS(ph)SVTP ddPTM_A459_MK2206_30min_R2 2 RVSPLNLSSVTP 12 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 RVS(0.004)PLNLS(0.995)S(0.001)VTP;RVS(0.323)PLNLS(0.613)S(0.063)VTP 174.23 0.00027221 172865000 79200 93904 77684 94848 92516 101596 100269 75211 79120 85644 TRUE FALSE 85263.61289 89240.86391 80273.94579 87098.615 88883.35698 105462.307 87103.55986 85041.33594 86001.71458 82849.44329 1.029139237 1.077145004 0.968913521 1.051287873 1.072829864 1.272939235 1.051347558 1.026456335 1.038048189 1 16.33820438 -1.980230366 22.83265014 1.063478884 0.169598546 0 0.077853972 0 0 0.018739028 0 0.010465733 1.980230366 -0.893880338 RVSS(ph)DEEHTVDSCISDMK ddPTM_A459_MK2206_30min_R2 1 RVSSDEEHTVDSCISDMK 18 1 Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150;H7C183 Q70CQ2-3 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 RVS(0.441)S(0.559)DEEHTVDSCISDMK 96.579 0.0019118 6180800 22160 26036 22758 27416 24397 22632 29217 18710 17399 22368 TRUE FALSE 23856.58664 24743.0901 23516.74036 25176.0251 23439.05119 23493.27662 25380.7728 21155.46124 18912.33357 21638.13399 1.102525137 1.143494634 1.086819241 1.163502597 1.083228859 1.085734871 1.172964952 0.977693421 0.874027935 1 14.40128847 -7.888975998 5.277205633 0.933842597 1.11791548 0.777289491 0.041765743 0.083905722 3.506525211 0.022145279 0.010333955 1.29E-08 7.888975998 0.184072883 RVST(ph)DLPEGQDVYTAACNSVIHR ddPTM_A459_MK2206_30min_R2 1 RVSTDLPEGQDVYTAACNSVIHR 23 1 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 RVS(0.445)T(0.555)DLPEGQDVYTAACNSVIHR 105.61 2.65E-05 10066000 21979 29823 24669 25560 26667 29724 25974 18111 24737 25991 TRUE FALSE 23661.72914 28342.03319 25491.45215 23471.66624 25619.91959 30855.16765 22563.5826 20478.16988 26888.57955 25142.9158 0.941089304 1.127237327 1.013862209 0.933530002 1.018971697 1.227191305 0.897413123 0.814470766 1.069429646 1 14.61786435 RVTNDIS(ph)PESSPGVGR ddPTM_A459_MK2206_30min_R1 2 RVTNDISPESSPGVGR 16 1 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 RVTNDIS(0.996)PES(0.004)SPGVGR;RVTNDIS(1)PESSPGVGR 226.67 8.29E-15 15150900 3429.7 3829 3278.2 3138.3 3909.9 3656 3110.8 3614.5 2180.5 1468.87 TRUE FALSE 3137.986005 3579.731404 3055.684918 3380.01241 3754.160404 3862.999561 2903.284208 3582.898808 2407.170778 1650.844705 1.900836581 2.168424076 1.850982657 2.047444196 2.274084529 2.340013902 1.758665851 2.170342732 1.458144894 1 10.6889887 -8.473212593 2.910798874 1.002344395 2.066908258 0.791973707 0.178284316 0.101235391 1.882356946 0.171775821 0.046087897 3.36E-09 8.473212593 1.064563863 RVTNDIS(ph)PESSPGVGR ddPTM_A459_MK2206_30min_R2 2 RVTNDISPESSPGVGR 16 1 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 RVT(0.001)NDIS(0.932)PES(0.068)SPGVGR;RVTNDIS(0.82)PES(0.179)S(0.001)PGVGR 178.02 2.04E-06 12861000 19489 39320 32749 40966 36029 44498 32004 28181 36439 28002 TRUE FALSE 20981.09282 37367.42598 33840.83531 37618.94676 34614.32043 46191.40257 27801.83636 31864.35346 39608.39835 27088.29703 0.77454455 1.379467522 1.249278804 1.388752741 1.277833021 1.705216187 1.02634124 1.176314385 1.462195955 1 14.72538208 -4.756668904 24.98603918 1.306873013 0.774543736 0.385397334 0.197193283 148.1523648 775876.3224 0.047294511 0.374577829 1.75E-05 4.756668904 -0.532329277 RVTQHES(ph)DNENEIQIQNK ddPTM_A459_MK2206_30min_R2 2 RVTQHESDNENEIQIQNK 18 1 Q5VZL5-2;Q5VZL5-4;Q5VZL5 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 RVT(0.184)QHES(0.816)DNENEIQIQNK;RVT(0.117)QHES(0.883)DNENEIQIQNK 76.176 0.010186 20954000 91959 145190 108231 152327 161059 150166 160423 111503 154886 129170 TRUE FALSE 98999.45174 137980.0757 111839.3675 139881.3968 154735.0144 155880.6724 139359.2674 126076.8249 168357.7043 124955.1935 0.792279608 1.104236422 0.895035768 1.119452445 1.238323995 1.247492545 1.115273912 1.008976269 1.347344593 1 16.93105134 -5.865240221 5.246769861 1.163349173 0.948788704 0.408528778 0.123040077 0.209583744 8.929923166 0.033706025 0.051103694 1.36E-06 5.865240221 -0.214560469 RVTSIADR ddPTM_A459_MK2206_30min_R2 1 RVTSIADR 8 1 B1ALA9;A0A2R8Y7H4;P60891-2;P60891;P11908;P11908-2 B1ALA9 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 0 86.898 0.044957 1703300 4260.6 7202.8 5504.6 7072.7 6097 7160 6714.6 5777.1 5701 4989.6 FALSE TRUE 4586.794812 6845.119426 5688.120617 6494.837786 5857.601145 7432.478817 5832.964954 6532.186806 6196.862675 4826.789761 0.950278558 1.418151559 1.178447974 1.345581247 1.213560448 1.539838938 1.208456395 1.353319106 1.283847647 1 12.23684827 -4.748551767 24.97217412 1.295712933 0.950277727 0.332413461 0.140033859 652.8213935 1264888.278 0.031694326 0.569107968 1.78E-05 4.748551767 -0.345435206 RVVLGDGVQLPPGDY(ph)STTPGGTLFSTTPGGTR ddPTM_A459_MK2206_30min_R1 2 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 RVVLGDGVQLPPGDY(0.5)S(0.045)T(0.039)T(0.162)PGGT(0.14)LFS(0.026)T(0.026)T(0.047)PGGT(0.015)R;RVVLGDGVQLPPGDY(0.262)S(0.237)T(0.237)T(0.237)PGGT(0.027)LFS(0.001)T(0.001)TPGGTR 61.45 0.0012913 42394800 6569.14 6505.91 7035.67 7813.69 7619.32 5854.74 5791.79 5835.35 3637.15 2730.97 TRUE FALSE 6010.400147 6082.374076 6558.108323 8415.501758 7315.82635 6186.230319 5405.430257 5784.33215 4015.244758 3069.303181 1.958229537 1.981679136 2.136676612 2.741828115 2.383546335 2.015516211 1.761126203 1.884575035 1.308194245 1 11.58369544 -8.134558795 0.898419949 1.002594428 2.228304841 0.751030785 0.233969497 0.301342695 0.488329703 0.246279877 0.092124441 7.34E-09 8.134558795 1.225710413 RVVLGDGVQLPPGDYS(ph)TTPGGTLFS(ph)TTPGGTR ddPTM_A459_MK2206_30min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.088)S(0.334)T(0.334)T(0.269)PGGT(0.143)LFS(0.564)T(0.128)T(0.128)PGGT(0.012)R 73.361 0.00010086 137790000 2759 2965.2 3061.5 2450.6 3702.3 3738.3 4033 4177.8 3209 2478.4 TRUE FALSE 2524.332562 2772.164941 2853.69391 2639.345637 3554.829551 3949.959315 3763.965929 4141.273935 3542.587034 2785.442903 0.90625895 0.995233088 1.024502748 0.947549718 1.276216988 1.418072261 1.351298899 1.486755995 1.27182181 1 11.44369103 -6.326782802 4.325714797 1.33899762 0.9733361 0.622174034 0.125369685 0.130543918 4.874619529 0.03750197 0.043482126 4.71E-07 6.326782802 -0.36566152 RVVLGDGVQLPPGDYS(ph)TTPGGTLFS(ph)TTPGGTR ddPTM_A459_MK2206_30min_R2 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.055)S(0.295)T(0.295)T(0.295)PGGT(0.125)LFS(0.29)T(0.29)T(0.29)PGGT(0.065)R 54.324 0.0050259 3654300 3514.2 5797.6 4901.8 5088.5 5234.3 6296.9 8102.7 6242 7311.4 7340.3 TRUE FALSE 3783.249854 5509.699614 5065.223565 4672.753273 5028.775082 6536.532942 7038.805757 7057.850832 7947.332356 7100.786612 0.532793064 0.775928065 0.713332739 0.658061357 0.708199719 0.920536456 0.991271269 0.993953377 1.119218587 1 12.79376314 -6.893437986 1.924479799 1.031245828 0.676166804 0.862935599 0.066394252 0.118537757 0.897538834 0.028178843 0.023503361 1.28E-07 6.893437986 -0.355079025 RVVLGDGVQLPPGDYST(ph)T(ph)PGGTLFSTTPGGTR ddPTM_A459_MK2206_30min_R2 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.19)S(0.05)T(0.44)T(0.459)PGGT(0.102)LFS(0.245)T(0.237)T(0.225)PGGT(0.054)R 61.112 0.002142 0 4398.3 6339.3 5870.5 5919.2 7108.2 6075.6 7260.4 6793.1 7285.1 7314.1 TRUE FALSE 4735.03723 6024.49958 6066.21954 5435.582425 6829.096352 6306.811215 6307.100759 7680.981494 7918.74483 7075.441516 0.66922145 0.851466239 0.857362686 0.76823226 0.965183068 0.891366454 0.891407376 1.085583349 1.119187377 1 12.78860446 -6.870874503 0.576358495 1.077287288 0.761374987 0.675837115 0.07438639 0.537336061 0.384312792 0.065213195 0.068926536 1.35E-07 6.870874503 -0.315912301 RVVLGDGVQLPPGDYST(ph)TPGGTLFS(ph)TTPGGTR ddPTM_A459_MK2206_30min_R1 3 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.009)S(0.027)T(0.508)T(0.508)PGGT(0.092)LFS(0.249)T(0.249)T(0.249)PGGT(0.108)R;RVVLGDGVQLPPGDY(0.006)S(0.044)T(0.452)T(0.452)PGGT(0.064)LFS(0.294)T(0.294)T(0.294)PGGT(0.101)R;RVVLGDGVQLPPGDY(0.005)S(0.109)T(0.443)T(0.443)PGGT(0.159)LFS(0.601)T(0.114)T(0.114)PGGT(0.013)R 83.557 2.52E-06 105668000 5622.9 5392.9 6011.8 5280.6 7674.1 7212.8 7918 7094.6 7043.9 6331.1 TRUE FALSE 5144.642828 5041.82123 5603.735766 5687.312727 7368.424347 7621.182503 7389.804667 7032.57266 7776.138612 7115.444465 0.723024802 0.708574321 0.787545429 0.799291282 1.03555363 1.071076099 1.038558407 0.98835325 1.092853531 1 12.79673816 -6.178208257 2.803205347 1.041553137 0.739574176 0.941797784 0.03467623 0.060948517 0.935869539 0.0113175 0.01504213 6.63E-07 6.178208257 -0.301978961 RVVLGDGVQLPPGDYST(ph)TPGGTLFS(ph)TTPGGTR ddPTM_A459_MK2206_30min_R2 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.025)S(0.102)T(0.417)T(0.417)PGGT(0.098)LFS(0.286)T(0.286)T(0.286)PGGT(0.083)R 49.088 0.046775 0 5654.4 8304 7920.2 8306.1 9082.6 10463 9655.4 8685.3 8685.5 9173.6 TRUE FALSE 6087.305211 7891.635435 8184.255515 7627.46506 8725.971488 10861.1768 8387.634382 9820.498531 9440.94909 8874.266183 0.685950262 0.889271887 0.92224589 0.85950375 0.983289357 1.223895765 0.945163714 1.106626546 1.063856875 1 13.11541211 -4.274560349 0.485223389 1.071181913 0.26676724 0.626847435 0.08536409 4.948212897 0.621983965 0.054564309 2.518487621 5.31E-05 4.274560349 -0.804414672 RVVLGDGVQLPPGDYST(ph)TPGGTLFSTT(ph)PGGTR ddPTM_A459_MK2206_30min_R2 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.018)S(0.055)T(0.826)T(0.099)PGGT(0.071)LFS(0.177)T(0.177)T(0.564)PGGT(0.012)R 73.87 7.86E-05 43156000 29414 71521 62072 88590 92798 105150 99811 65135 117600 62853 TRUE FALSE 31665.95846 67969.37114 64141.4495 81351.91361 89154.28425 109151.5569 86705.69581 73648.36814 127828.6354 60802.11176 0.520803596 1.117878461 1.054921411 1.337978423 1.46630243 1.795193518 1.426030993 1.211279773 2.10237164 1 15.89183381 -4.741245356 0.752206067 1.523825678 3.52E-10 0.495089592 0.295732426 2.424336643 1.001125719 0.114679319 3.17792479 1.81E-05 4.741245356 -1.523825678 RVVLGDGVQLPPGDYST(ph)TPGGTLFSTTPGGT(ph)R ddPTM_A459_MK2206_30min_R2 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.01)S(0.097)T(0.333)T(0.333)PGGT(0.13)LFS(0.251)T(0.251)T(0.251)PGGT(0.346)R 53.482 0.0087601 6162500 5955.8 7703.4 7068.6 9045.3 11956 13485 11597 10591 8261.5 8681.2 TRUE FALSE 6411.780627 7320.860358 7304.263596 8306.270056 11486.54737 13998.18112 10074.29997 11975.28006 8980.070337 8397.933155 0.763495078 0.871745491 0.869769199 0.989085041 1.367782662 1.66686027 1.199616594 1.425979446 1.069319102 1 13.03581859 -6.10282193 3.322584745 1.323331021 0.845308785 0.564234377 0.180276804 0.175368514 3.643472191 0.054778985 0.074772526 7.89E-07 6.10282193 -0.478022236 RVVLGDGVQLPPGDYSTT(ph)PGGTLFS(ph)TTPGGTR ddPTM_A459_MK2206_30min_R1 2 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.088)S(0.108)T(0.212)T(0.452)PGGT(0.2)LFS(0.264)T(0.264)T(0.264)PGGT(0.148)R;RVVLGDGVQLPPGDY(0.064)S(0.058)T(0.242)T(0.632)PGGT(0.084)LFS(0.5)T(0.149)T(0.234)PGGT(0.036)R 74.332 2.90E-05 33079000 2479.52 2993.91 3037.74 2623.61 3383.32 3053.04 3539.86 3170.5 2526.82 2336.55 TRUE FALSE 2268.623804 2799.005915 2831.546672 2825.680897 3248.5552 3225.900486 3303.722398 3142.780653 2789.491981 2626.019454 0.863902131 1.065874021 1.078265688 1.076031974 1.237064408 1.228437391 1.258072324 1.196784985 1.062251072 1 11.35866189 -3.920533581 0.775217724 1.172901283 4.96E-10 0.515305952 0.081953958 6.638680541 1.144433651 0.030842211 9.21471184 0.000120079 3.920533581 -1.172901282 RVVLGDGVQLPPGDYSTT(ph)PGGTLFS(ph)TTPGGTR ddPTM_A459_MK2206_30min_R2 2 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.008)S(0.029)T(0.129)T(0.622)PGGT(0.224)LFS(0.325)T(0.325)T(0.325)PGGT(0.012)R;RVVLGDGVQLPPGDY(0.042)S(0.136)T(0.136)T(0.68)PGGT(0.061)LFS(0.312)T(0.312)T(0.312)PGGT(0.01)R 70.109 0.00018936 36172000 66562 99194 84402 106726 123136 124344 130633 96518 141033 115992 TRUE FALSE 71658.0379 94268.1702 87215.92055 98006.1444 118301.0619 129075.9981 113480.7302 109133.234 153299.7954 112207.1905 0.638622512 0.840125929 0.777275682 0.873439072 1.054309099 1.150336243 1.011349893 0.972604639 1.36622078 1 16.77580561 -6.100669154 1.76030807 1.097184274 0.749817532 0.654543247 0.113416592 0.227549623 1.402694719 0.037873613 0.057249285 7.93E-07 6.100669154 -0.347366742 RVVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTR ddPTM_A459_MK2206_30min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.013)S(0.11)T(0.406)T(0.468)PGGT(0.012)LFS(0.276)T(0.242)T(0.467)PGGT(0.007)R 88.751 5.98E-07 149020000 3447.7 4420.7 4189.5 3658.8 4076.2 4288.6 4776.6 4564.6 3984.2 2899.1 TRUE FALSE 3154.45501 4132.911627 3905.128413 3940.60141 3913.836323 4531.416826 4457.961729 4524.692183 4398.371848 3258.262395 0.968140262 1.268440391 1.198530977 1.209418068 1.20120354 1.39074644 1.368202185 1.388682566 1.349913332 1 11.66988708 -6.644680548 5.933917321 1.327605045 1.175655449 0.185341855 0.130641898 0.305387879 14.70286913 0.041249406 0.041120747 2.27E-07 6.644680548 -0.151949597 RVVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTR ddPTM_A459_MK2206_30min_R2 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.065)S(0.128)T(0.132)T(0.668)PGGT(0.056)LFS(0.243)T(0.227)T(0.459)PGGT(0.022)R 67.682 0.0005662 42453000 63020 104760 97365 99189 128870 149750 168270 137000 139410 134110 TRUE FALSE 67844.85965 99557.77074 100611.1005 91084.94141 123809.9163 155448.8412 146175.9469 154906.3704 151535.6298 129734.0017 0.522953572 0.767399213 0.775518362 0.70208997 0.954336679 1.198212027 1.126735821 1.194030619 1.168048683 1 16.98519712 -6.451760295 2.576382865 1.149252634 0.699204748 0.859323564 0.084640311 0.098608895 1.290461483 0.028593567 0.031994593 3.53E-07 6.451760295 -0.450047886 RVVLGDGVQLPPGDYSTT(ph)PGGTLFSTTPGGTR ddPTM_A459_MK2206_30min_R2 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 RVVLGDGVQLPPGDY(0.092)S(0.072)T(0.094)T(0.202)PGGT(0.155)LFS(0.119)T(0.119)T(0.119)PGGT(0.027)R 47.822 0.020332 11109000 7528.2 8028.8 8459.4 11123 10636 9851.5 9091.6 6633 7313.1 6685 TRUE FALSE 8104.56478 7630.101467 8741.432174 10214.21532 10218.3772 10226.40574 7897.861999 7499.955874 7949.180219 6466.868997 1.253244002 1.179875682 1.351725569 1.579468414 1.580111983 1.581353471 1.221280654 1.159750704 1.229216213 1 12.65885167 -7.450552181 6.223077382 1.153733552 1.421030563 0.474040927 0.14026098 0.250116403 17.14214004 0.068878076 0.045629097 3.54E-08 7.450552181 0.267297011 RVVLGDGVQLPPGDYSTTPGGT(ph)LFSTTPGGTR ddPTM_A459_MK2206_30min_R2 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 RVVLGDGVQLPPGDY(0.015)S(0.013)T(0.01)T(0.08)PGGT(0.201)LFS(0.201)T(0.201)T(0.201)PGGT(0.08)R 69.088 0.00019712 19979000 28929 43570 31727 36267 33789 34251 31031 28180 26967 26956 TRUE FALSE 31143.82648 41406.37716 32784.76234 33303.87009 32462.27408 35554.44581 26956.59243 31863.22276 29312.54091 26076.42793 1.194328708 1.587885322 1.257256647 1.277163812 1.244889606 1.363470714 1.033753262 1.2219167 1.124101085 1 14.67045864 -7.383028513 0.339510264 0.992650235 1.414522413 0.450038019 0.11796903 1.306254226 0.407359005 0.152110158 0.195769908 4.14E-08 7.383028513 0.421872178 RVVLGDGVQLPPGDYSTTPGGTLFSTT(ph)PGGTR ddPTM_A459_MK2206_30min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 RVVLGDGVQLPPGDYSTTPGGT(0.088)LFS(0.15)T(0.15)T(0.386)PGGT(0.226)R 123.5 3.48E-17 29860000 2987.4 3246.9 3626.2 3071.1 3556 2344.3 2061.7 2226.9 1957.1 1331.6 TRUE FALSE 2733.305943 3035.52622 3380.063647 3307.636654 3414.35699 2477.03224 1924.167755 2207.430448 2160.547549 1496.568661 1.826381919 2.028324058 2.258542314 2.210146945 2.281456961 1.65514106 1.285719663 1.474994436 1.443667507 1 10.54744275 -6.958073233 3.746552076 1.348773656 2.126497763 0.82956863 0.174784622 0.095683208 2.8414095 0.067868976 0.057404438 1.10E-07 6.958073233 0.777724108 RVVLGDGVQLPPGDYSTTPGGTLFSTT(ph)PGGTR ddPTM_A459_MK2206_30min_R2 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 RVVLGDGVQLPPGDY(0.003)S(0.008)T(0.008)T(0.024)PGGT(0.076)LFS(0.167)T(0.167)T(0.501)PGGT(0.046)R 73.373 5.10E-05 23929000 30173 52545 37644 55774 60710 59045 46740 41552 56423 34299 TRUE FALSE 32483.06808 49935.69171 38899.03217 51217.08579 58326.22036 61291.99885 40602.98186 46982.98907 61330.57055 33179.82644 0.979000542 1.505001595 1.172369971 1.543621269 1.757882021 1.847267012 1.223724962 1.416010694 1.848429517 1 15.01801872 -5.771057147 24.47794654 1.548153865 1.247411795 0.186905102 0.281221903 245.8267592 625648.7454 0.077573961 0.116807463 1.69E-06 5.771057147 -0.30074207 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGT(ph)R ddPTM_A459_MK2206_30min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 RVVLGDGVQLPPGDY(0.001)S(0.003)T(0.012)T(0.046)PGGT(0.036)LFS(0.044)T(0.104)T(0.249)PGGT(0.503)R 97.61 4.08E-06 0 690.25 876.4 979.96 978.8 835.42 720.51 668.88 744.65 539.66 378.24 TRUE FALSE 631.5406129 819.3462007 913.4430455 1054.187346 802.1434524 761.3046535 624.2602356 738.1396036 595.7595882 425.0992268 1.485631055 1.927423409 2.148776069 2.479861828 1.886955802 1.79088694 1.468504754 1.736393663 1.401460061 1 8.731655825 -8.140683921 0.637449169 1.026185514 2.010033196 0.578545394 0.257550841 0.551345937 0.505785946 0.274340281 0.12807162 7.23E-09 8.140683921 0.983847682 RWDQTADQTPGAT(ph)PK ddPTM_A459_MK2206_30min_R1 2 RWDQTADQTPGATPK 15 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 RWDQTADQTPGAT(1)PK;RWDQTADQTPGAT(1)PK 108.97 0.0048193 71184000 13577.2 17109.4 16659.3 13941.1 11003.4 9657.3 12070.6 12333 15903.8 15901 TRUE FALSE 12422.38784 15995.57495 15528.51313 15014.84594 10565.11128 10204.08798 11265.3923 12225.17388 17557.05692 17870.93593 0.695116803 0.895060842 0.868925567 0.840182406 0.59118959 0.570987889 0.63037506 0.684081345 0.982436342 1 14.12532757 -8.268269328 23.52475204 0.991218328 0.724149326 0.499503129 0.107781023 251.7145439 866966.2864 0.111227856 0.03144851 5.39E-09 8.268269328 -0.267069002 RWDQTADQTPGAT(ph)PK ddPTM_A459_MK2206_30min_R2 1 RWDQTADQTPGATPK 15 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 RWDQTADQT(0.061)PGAT(0.939)PK 159.64 0.017356 5909400 26654 26528 23661 23848 31896 25230 29623 18083 23134 25392 TRUE FALSE 28694.65073 25210.6581 24449.84593 21899.54211 30643.60278 26190.14533 25733.46452 20446.51019 25146.1535 24563.46112 1.168184345 1.026347955 0.995374626 0.891549526 1.247527888 1.066223738 1.047631862 0.832395324 1.023721917 1 14.58422624 -7.558889465 24.74060714 0.944837687 1.060845026 0.202147944 0.101216316 252.2981301 173334.5044 0.048119629 0.027782005 2.76E-08 7.558889465 0.116007339 RWS(ph)AEVTSSTYSDEDRPPK ddPTM_A459_MK2206_30min_R2 4 RWSAEVTSSTYSDEDRPPK 19 2 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 RWS(0.995)AEVT(0.003)S(0.001)STYSDEDRPPK;RWS(0.963)AEVT(0.026)S(0.008)S(0.002)T(0.002)YSDEDRPPK;RWS(0.999)AEVT(0.001)SSTYSDEDRPPK;RWS(0.894)AEVT(0.097)S(0.004)S(0.003)T(0.001)YSDEDRPPK 101.78 0.00045004 45417000 134833 130237 145160 145541 131317 131523 160229 133223 115655 155257 TRUE FALSE 145155.9181 123769.62 149999.5619 133649.8347 126160.8348 136528.1999 139190.7398 150635.7035 125714.4628 150190.9768 0.966475625 0.824081597 0.998725524 0.88986594 0.840002758 0.909030641 0.926758337 1.002961075 0.837030729 1 17.19643862 -7.34859649 4.016995641 0.943620368 0.901634314 0.075366947 0.064644626 0.641058445 19.057273 0.027361513 0.017984797 4.48E-08 7.34859649 -0.041986054 RWS(ph)EDCR ddPTM_A459_MK2206_30min_R2 1 RWSEDCR 7 1 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 RWS(1)EDCR 81.95 0.021597 28389000 33182 34129 30847 38182 26368 30599 30607 18229 21693 28262 TRUE FALSE 35722.43943 32434.20349 31875.42358 35062.40846 25332.65983 31763.46639 26588.26413 20611.59289 23579.81793 27339.81325 1.306608758 1.186335956 1.165897634 1.282467006 0.926584962 1.16180261 0.972510817 0.753903938 0.862471799 1 14.73871577 -6.811430668 0.836233459 0.861175077 1.239229263 0.634225094 0.106412322 0.385578348 0.583678881 0.071006493 0.063723506 1.54E-07 6.811430668 0.378054185 RWS(ph)GNEPTDEFSDLPLR ddPTM_A459_MK2206_30min_R1 2 RWSGNEPTDEFSDLPLR 17 1 Q96II8-3;Q96II8;Q96II8-2;E9PD99;Q96II8-4 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 RWS(0.998)GNEPT(0.002)DEFSDLPLR;RWS(1)GNEPTDEFSDLPLR 88 0.005298 5351200 1029.24 1370.26 1364.11 1103.72 1098.66 1180.83 1249.4 1105.39 1265.26 1193.17 TRUE FALSE 941.6977332 1281.055825 1271.518014 1188.728706 1054.898046 1247.687574 1166.054806 1095.725692 1396.788305 1340.988908 0.702241255 0.955306802 0.948194282 0.886456777 0.786656802 0.930423486 0.869548435 0.817102726 1.041610633 1 10.38908159 -8.268646956 24.84955442 1.020805343 0.868812609 0.416884719 0.074783479 560.2160176 1931427.234 0.06573261 0.018363963 5.39E-09 8.268646956 -0.151992734 RWS(ph)TELVPEGLQSPR ddPTM_A459_MK2206_30min_R1 1 RWSTELVPEGLQSPR 15 1 H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BMM1;H3BV44 H3BRD5 MYO9A Unconventional myosin-IXa 1 RWS(0.839)T(0.161)ELVPEGLQSPR 103.73 0.0028057 3514000 1002.1 1448.8 1358.8 1153.9 816.3 972.18 979.44 996.09 1005.8 999.24 TRUE FALSE 916.8661328 1354.482857 1266.568442 1242.773578 783.7850425 1027.223991 914.1033447 987.3812901 1110.356509 1123.033395 0.816419295 1.206093125 1.127810132 1.106622103 0.697917841 0.914686951 0.813959183 0.879209198 0.988711924 1 10.13318511 -6.229207653 24.96087318 0.874565503 1.078909841 0.337239698 0.123898403 670.0101996 518868.8371 0.035495707 0.045820917 5.90E-07 6.229207653 0.204344338 RWS(ph)WGGSAMANSESK ddPTM_A459_MK2206_30min_R1 1 RWSWGGSAMANSESK 15 1 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 RWS(1)WGGSAMANSESK 119.92 0.0049368 0 2751.6 2169.2 2245.4 2434.8 2730.5 2498.9 2589.4 2252.8 1956.4 2187.7 TRUE FALSE 2517.561971 2027.984686 2092.988504 2622.328718 2621.738403 2640.385558 2416.665851 2233.104007 2159.774781 2458.728792 1.023928291 0.82481024 0.851248218 1.066538419 1.066298329 1.073882393 0.982892403 0.908235188 0.878411148 1 11.26369689 -4.468158591 23.05578638 0.963375952 2.129922091 0.043204484 0.087864671 126.2046477 861315.9535 0.023708827 112616.4989 3.40E-05 4.468158591 1.166546139 RY(ph)SPDELR ddPTM_A459_MK2206_30min_R2 1 RYSPDELR 8 1 S5FZ81;Q8WUB8-2;Q8WUB8;Q8WUB8-3 S5FZ81 PHF10 PHD finger protein 10 1 RY(0.719)S(0.281)PDELR 109.44 0.02118 7846100 8844.5 13726 8539.1 14163 12813 10984 10314 9476 10662 12355 TRUE FALSE 9521.64172 13044.3868 8823.789332 13005.83759 12309.89724 11402.00382 8959.759411 10714.54574 11589.36149 11951.85736 0.796666278 1.09141085 0.738277664 1.088185476 1.02995684 0.953994302 0.749654145 0.896475369 0.969670331 1 13.54494722 -9.917904607 16.00567458 0.999988776 0.926200836 0.033100549 0.122925755 0 0 0.116471874 0.028248579 1.21E-10 9.917904607 -0.07378794 RY(ph)Y(ph)YLAFT(ph)AHQT(ph)PLASK ddPTM_A459_MK2206_30min_R1 1 RYYYLAFTAHQTPLASK 17 1 F5H2J1;Q8WXR4-7;Q8WXR4-6;Q8WXR4-3;Q8WXR4-5;Q8WXR4-2;Q8WXR4-4;Q8WXR4 F5H2J1 MYO3B Myosin-IIIb 4 RY(0.979)Y(0.935)Y(0.104)LAFT(0.981)AHQT(0.947)PLAS(0.054)K 52.599 0.039638 0 498.35 340.83 393 423.59 622.36 588.76 525.81 481.61 335.32 369.08 TRUE FALSE 455.9627156 318.6419051 366.324255 456.2149752 597.5700833 622.0950824 490.7341743 477.3993345 370.177714 414.8044168 1.099223386 0.768173848 0.883125252 1.099831527 1.440606848 1.499731095 1.18304954 1.150902245 0.892415073 1 8.696287446 -5.911898107 4.374624995 1.220830393 0.904464873 0.298833886 0.186392748 0.249108416 8.734232505 0.057000927 0.086616171 1.22E-06 5.911898107 -0.31636552 RYDDPEVQK ddPTM_A459_MK2206_30min_R1 1 RYDDPEVQK 9 1 P38646;A0A3B3ITI4;D6RJI2 P38646 HSPA9 "Stress-70 protein, mitochondrial" 0 110.38 0.010401 0 5766.8 6220.9 5502.6 5936.5 6160 5296.2 5834.6 5658.5 4899.1 4509.1 FALSE TRUE 5276.303377 5815.918279 5129.098843 6393.730259 5914.634156 5596.066267 5445.38448 5609.028331 5408.378977 5067.72135 1.041158938 1.147639714 1.012111458 1.261657818 1.167119056 1.1042569 1.074523263 1.106814669 1.067221065 1 12.30712148 -8.574259164 0.835113994 1.00079475 1.12365563 0.235194627 0.065357348 1.069484515 1.645708275 0.0641 0.022935498 2.67E-09 8.574259164 0.12286088 RYDDPEVQK ddPTM_A459_MK2206_30min_R2 1 RYDDPEVQK 9 1 P38646;A0A3B3ITI4;D6RJI2 P38646 HSPA9 "Stress-70 protein, mitochondrial" 0 108.43 0.012281 0 64385 66730 68554 72295 53350 61365 77669 57052 84960 60215 FALSE TRUE 69314.3651 63416.28523 70839.55614 66388.26724 51255.21094 63700.28808 67470.967 64508.89229 92349.66723 58250.18948 1.189942311 1.088688051 1.216125763 1.139709035 0.879914922 1.09356362 1.158296095 1.107445192 1.585396855 1 15.82997512 -8.088760671 25 1.310608109 1.106496976 0.177379159 0.157028014 104.037039 29299.30622 0.100162363 0.037857822 8.15E-09 8.088760671 -0.204111133 RYDSNSGGER ddPTM_A459_MK2206_30min_R2 1 RYDSNSGGER 10 1 P62191;P62191-2 P62191 PSMC1 26S protease regulatory subunit 4 0 118.23 0.0078146 663400 3455.7 2202.7 2401.7 1034.6 2551.1 1992.8 2073.8 11416 7843 1948.2 FALSE TRUE 3720.271049 2093.317121 2481.771479 950.0698705 2450.930996 2068.6374 1801.507569 12908.1104 8525.169963 1884.630394 1.974005652 1.110730851 1.316847849 0.504114692 1.300483641 1.097635593 0.955894363 6.849146889 4.523523547 1 10.8800659 -7.735377058 24.99942889 4.514751799 1.158035454 0.483048798 1.377993014 146.5840139 140606.0829 0.607566591 0.350632494 1.84E-08 7.735377058 -3.356716345 RYEDDGIS(ph)DDEIEGK ddPTM_A459_MK2206_30min_R1 2 RYEDDGISDDEIEGK 15 1 I3VM54;Q9Y2K7-3;Q9Y2K7 I3VM54 KDM2A Lysine-specific demethylase 2A 1 RYEDDGIS(1)DDEIEGK;RYEDDGIS(1)DDEIEGK 117.53 0.0038256 14152400 7361.5 8088.4 9010 7758.4 6691.2 6767 8449.7 7747.3 8095.2 9109.5 TRUE FALSE 6735.365768 7561.84369 8398.426303 8355.953312 6424.675335 7150.141692 7886.03593 7679.566173 8936.725009 10238.05363 0.657875609 0.738601687 0.82031474 0.816166198 0.627528978 0.698388771 0.770267105 0.750100209 0.872892967 1 13.32165385 -8.500797182 1.702890276 1.000132964 0.733472563 0.684102378 0.058208717 0.23237282 1.501636547 0.05955438 0.017164571 3.16E-09 8.500797182 -0.266660401 RYEDDGIS(ph)DDEIEGK ddPTM_A459_MK2206_30min_R2 4 RYEDDGISDDEIEGK 15 1 I3VM54;Q9Y2K7-3;Q9Y2K7 I3VM54 KDM2A Lysine-specific demethylase 2A 1 RYEDDGIS(1)DDEIEGK;RYEDDGIS(1)DDEIEGK;RYEDDGIS(1)DDEIEGK;RYEDDGIS(1)DDEIEGK 224.64 9.38E-10 32910100 288188 283067 272966 270847 253865 213012 304334 225487 196068 302540 TRUE FALSE 310251.8949 269010.3044 282066.5502 248717.9337 243896.9845 221118.3209 264374.5802 254958.9251 213121.6402 292668.1446 1.060080848 0.919164963 0.963776056 0.849829195 0.833356787 0.755525755 0.903325439 0.871153659 0.728202383 1 18.1589062 -4.820384549 0.865468081 0.840083828 1.149543584 0.401924022 0.0761325 2.147659514 1.296440177 0.026792968 0.628810163 1.51E-05 4.820384549 0.309459755 RYEPYGMYS(ph)DDDANSDASSVCSER ddPTM_A459_MK2206_30min_R2 1 RYEPYGMYSDDDANSDASSVCSER 24 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RY(0.002)EPY(0.003)GMY(0.084)S(0.91)DDDANS(0.001)DASSVCSER 69.913 0.00082776 4301600 5086.1 5834.4 5229.2 7731.1 8001.8 8271.6 4747 7986.1 5230.3 5262.4 TRUE FALSE 5475.495727 5544.67218 5403.538918 7099.444399 7687.609126 8586.381534 4123.713198 9029.91069 5685.22204 5090.688319 1.075590447 1.089179269 1.061455461 1.394594199 1.510131567 1.686683803 0.810050221 1.77380938 1.116788474 1 12.31364502 -5.759160156 24.95069993 1.360702012 1.076785414 0.136674034 0.281710298 99.81005656 1092589.662 0.073819849 0.120392148 1.74E-06 5.759160156 -0.283916598 RYESQLR ddPTM_A459_MK2206_30min_R1 2 RYESQLR 7 1 O15212 O15212 PFDN6 Prefoldin subunit 6 0 ; 109.86 0.02119 3324600 1352.91 1355.82 1610.22 1384.46 1248.42 1298.09 1730.27 1785.94 600.64 917.38 FALSE TRUE 1237.8379 1267.555872 1500.922753 1491.091349 1198.692788 1371.586734 1614.846845 1770.325715 663.0786774 1031.03196 1.200581503 1.229405024 1.455748037 1.446212539 1.162614578 1.330304769 1.566243247 1.71704252 0.643121361 1 10.00987334 -8.271259968 24.98981731 0.821560638 1.383832831 0.611762547 0.180631779 526.6281216 1340061.053 0.173118467 0.046909732 5.35E-09 8.271259968 0.562272193 RYESQLR ddPTM_A459_MK2206_30min_R2 2 RYESQLR 7 1 O15212 O15212 PFDN6 Prefoldin subunit 6 0 ; 125.81 0.0080069 6675900 9931.8 10647.4 11552.5 12216.6 10883.5 12409.2 12030.7 8469.3 12229.8 9012.5 FALSE TRUE 10692.18624 10118.6656 11937.65458 11218.4647 10456.1591 12881.4408 10451.05464 9576.266589 13293.5259 8718.422863 1.226389957 1.160607344 1.369244733 1.286753909 1.199317729 1.477496676 1.198732248 1.09839437 1.52476269 1 13.08985146 -10.98126267 6.039245876 0.999851605 1.276930764 0.29564858 0.130524043 0.000250708 2.25E-05 0.121493135 0.029450758 1.04E-11 10.98126267 0.277079159 RYFGGTEDR ddPTM_A459_MK2206_30min_R1 1 RYFGGTEDR 9 1 Q16658 Q16658 FSCN1 Fascin 0 90.827 0.037922 6018000 2944.6 2652.1 2990.7 2924.5 3196.5 2845.1 2795.9 2781.7 2389.3 1963.1 FALSE TRUE 2694.146307 2479.447808 2787.699617 3149.745497 3069.176636 3006.187103 2609.390612 2757.37989 2637.676285 2206.303649 1.221113109 1.123801708 1.263515844 1.427611969 1.391094394 1.362544591 1.182697864 1.249773526 1.195518254 1 11.10741564 -8.760478334 0.943614116 1.00097357 1.289789047 0.486950673 0.087837335 0.89624555 1.562150075 0.097051645 0.032220127 1.74E-09 8.760478334 0.288815477 RYFGGTEDR ddPTM_A459_MK2206_30min_R2 3 RYFGGTEDR 9 1 Q16658 Q16658 FSCN1 Fascin 0 ;; 113.44 0.012327 12152200 47200 65944 53826 67108 65669 73542 60125 50598 63744 51575 FALSE TRUE 50813.66829 62669.31685 55620.53198 61625.06173 63090.5051 76340.69234 52230.51528 57211.33233 69288.3379 49892.11197 1.018470982 1.256096693 1.114816146 1.235166428 1.264538674 1.53011547 1.046869199 1.146700953 1.388763377 1 15.60652412 -4.756678787 24.88518012 1.227731496 1.018470645 0.139356524 0.149489333 276.626464 1445834.5 0.036497242 0.289504481 1.75E-05 4.756678787 -0.209260851 RYPSS(ph)ISS(ph)SPQK ddPTM_A459_MK2206_30min_R2 1 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RYPS(0.134)S(0.78)IS(0.09)S(0.897)S(0.099)PQK 133.98 0.0055988 23690000 143630 132390 130300 134730 123500 94833 131130 93211 82166 124140 TRUE FALSE 154626.4232 125815.7051 134644.137 123722.128 118650.7695 98441.93627 113912.4735 105393.9977 89312.65016 120089.322 1.287595106 1.047684366 1.12119991 1.030250867 0.988020979 0.819739296 0.948564549 0.877630051 0.743718498 1 16.87374835 -5.503523106 0.590084756 0.861088897 1.30311918 0.682993997 0.082496953 1.049393605 0.491439061 0.048039691 0.285132837 3.14E-06 5.503523106 0.442030284 RYPSS(ph)ISSSPQKDLTQAK ddPTM_A459_MK2206_30min_R1 1 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPS(0.303)S(0.431)IS(0.088)S(0.088)S(0.088)PQKDLT(0.001)QAK 68.168 0.031739 208230000 3375 3313.7 3929.9 3559.8 3386.7 2759.3 2931.9 4043.5 2517.1 1728.7 TRUE FALSE 3087.938527 3097.977528 3663.149337 3833.976413 3251.800568 2915.529181 2736.318301 4008.148106 2778.761553 1942.864407 1.589374182 1.594541295 1.885437462 1.973362834 1.673714622 1.500634409 1.408393859 2.063009694 1.430239569 1 10.9239695 -6.56545541 5.763556002 1.545056685 1.765558067 0.180074275 0.26782295 0.406138233 33.19552527 0.088595111 0.089498461 2.72E-07 6.56545541 0.220501382 RYPSSIS(ph)SS(ph)PQK ddPTM_A459_MK2206_30min_R2 1 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RYPS(0.012)S(0.389)IS(0.599)S(0.314)S(0.686)PQK 113.52 0.019905 30192000 51273 46800 46690 52323 43716 35900 55163 37910 30636 46319 TRUE FALSE 55198.5003 44475.98005 48246.6213 48048.04353 41999.49018 37266.19966 47920.03184 42864.96716 33300.6639 44807.61482 1.231899991 0.992598696 1.076750492 1.072318706 0.937329299 0.831693448 1.069461787 0.956644698 0.743192068 1 15.45145631 -1.522878745 0.365872887 0.910777423 4.564122581 0.443167228 0.097032367 64.64736104 0.897116663 0.07883208 165.3670772 0.03 1.522878745 3.653345157 RYPSSISS(ph)SPQK ddPTM_A459_MK2206_30min_R1 3 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPSSISS(0.5)S(0.5)PQK;RYPSSISS(0.977)S(0.022)PQK;RYPSSISS(0.5)S(0.5)PQK 203.74 7.74E-05 321620500 17899.3 17928.9 18809.9 14283 13618 14118 18327 15762.4 20181.6 20804.5 TRUE FALSE 16376.87054 16761.72535 17533.1364 15383.07913 13075.56622 14917.34896 17104.43927 15624.591 22279.54954 23381.91853 0.700407476 0.716866981 0.749858758 0.657904916 0.559216995 0.637986525 0.731524201 0.668233917 0.952853784 1 14.51310569 -8.302845333 4.286768447 0.994072469 0.676484499 0.842196958 0.051808708 0.086786032 3.448734067 0.053351957 0.01472488 4.98E-09 8.302845333 -0.31758797 RYPSSISS(ph)SPQK ddPTM_A459_MK2206_30min_R2 1 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPSS(0.001)IS(0.001)S(0.499)S(0.499)PQK 177.38 0.00018613 102430000 52527 49824 49412 47870 46624 35632 60101 46997 36275 53914 TRUE FALSE 56548.50751 47349.81261 51059.37142 43958.86787 44793.30749 36988.00073 52209.66651 53139.66926 39430.13393 52154.7906 1.084243784 0.907870822 0.978996768 0.842853885 0.858853175 0.709196611 1.001052174 1.018883762 0.756021326 1 15.67051215 RYPSSISS(ph)SPQKDLTQAK ddPTM_A459_MK2206_30min_R1 1 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPS(0.024)S(0.035)IS(0.035)S(0.775)S(0.132)PQKDLTQAK 94.45 0.0047942 194240000 3619.9 4143 4303 3635.9 3997.3 3086.2 3158.3 4190.5 2823.9 1899.4 TRUE FALSE 3312.008496 3873.289947 4010.924349 3915.937648 3838.079077 3260.937977 2947.61557 4153.8629 3117.45451 2134.712012 1.551501316 1.814432076 1.878906535 1.834410275 1.79793764 1.527577471 1.380802447 1.945865708 1.460363034 1 11.05982574 -6.769080183 9.687901283 1.516686296 1.786726265 0.297899694 0.232358496 0.223562114 214.98081 0.077951927 0.071747875 1.70E-07 6.769080183 0.270039969 RYPSSISSS(ph)PQK ddPTM_A459_MK2206_30min_R1 1 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPSSISS(0.238)S(0.762)PQK 101.75 0.0062843 17222000 1939.8 2403.6 2275.9 1707 1783.3 1925.1 2003.4 1921.4 1757.1 2079.6 TRUE FALSE 1774.809824 2247.125203 2121.418249 1838.473436 1712.267385 2034.097498 1869.756841 1904.601402 1939.756833 2337.236548 0.759362515 0.961445347 0.907660909 0.786601355 0.732603376 0.870300227 0.799986139 0.814894583 0.829936035 1 11.19058804 -10.76024543 6.568944247 1.00000165 0.831231276 0.381797241 0.065155822 1.65E-06 1.91E-07 0.06595984 0.015997455 1.74E-11 10.76024543 -0.168770374 RYPSSISSS(ph)PQK ddPTM_A459_MK2206_30min_R2 3 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPSSISS(0.22)S(0.78)PQK;RYPSSISS(0.045)S(0.955)PQK;RYPSS(0.007)IS(0.002)S(0.019)S(0.972)PQK 181.67 0.00018697 523845200 220643 213684 219391 190227 174901 163791 249607 202902 153064 235350 TRUE FALSE 237535.5977 203072.7633 226705.3864 174684.8456 168033.5079 170024.1813 216833.3011 229421.9881 166377.23 227670.5488 1.043330369 0.891958861 0.995760706 0.76727028 0.738055532 0.746799189 0.952399431 1.007692867 0.730780643 1 17.79658815 -5.746416219 24.896288 0.844747529 0.9685109 0.229464463 0.106963745 373.9391336 619684.2461 0.030215969 0.052069642 1.79E-06 5.746416219 0.123763371 RYPSSISSS(ph)PQKDLTQAK ddPTM_A459_MK2206_30min_R2 1 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPS(0.001)S(0.001)IS(0.003)S(0.081)S(0.91)PQKDLT(0.003)QAK 55.575 0.026245 331180000 154370 259290 231670 252130 300520 269670 278430 209750 279770 248270 TRUE FALSE 166188.6859 246414.0356 239393.7622 231530.1725 288720.0748 279932.4808 241871.8065 237165.0452 304103.8889 240168.9702 0.691965685 1.026002799 0.996772239 0.964030334 1.202153944 1.165564729 1.00709016 0.987492451 1.266208073 1 17.87369024 -4.277456101 1.174670831 1.084280443 1.30E-15 0.568538708 0.09891639 3.382688643 1.750623755 0.030056687 5.995097117 5.28E-05 4.277456101 -1.084280443 RYS(ph)DFEWLK ddPTM_A459_MK2206_30min_R1 2 RYSDFEWLK 9 1 A0A087X0R6;Q9UMY4-3;Q9UMY4;Q9UMY4-1 A0A087X0R6 SNX12 Sorting nexin-12 1 RYS(1)DFEWLK;RYS(1)DFEWLK 115.92 0.004114 22945000 12936.2 13041.4 14186.5 11109.9 12399.8 12174.2 14169.8 11869 14614.9 15272 TRUE FALSE 11835.90826 12192.40249 13223.55991 11965.58642 11905.88971 12863.49268 13224.5585 11765.23058 16134.17115 17164.01066 0.689577075 0.710346942 0.77042366 0.697132311 0.693654295 0.749445624 0.770481839 0.685459291 0.940000066 1 14.06709908 -8.357276126 4.209876372 0.994611267 0.723023685 0.907591865 0.031959219 0.060760322 1.777263398 0.030817514 0.008161252 4.39E-09 8.357276126 -0.271587582 RYS(ph)DFEWLK ddPTM_A459_MK2206_30min_R2 2 RYSDFEWLK 9 1 A0A087X0R6;Q9UMY4-3;Q9UMY4;Q9UMY4-1 A0A087X0R6 SNX12 Sorting nexin-12 1 RYS(1)DFEWLK;RYS(1)DFEWLK 125.36 0.0025994 8023000 65725 67642 61037 59789 59703 49677 71176 56772 44143 74954 TRUE FALSE 70756.95653 64282.99664 63071.94312 54904.04744 57358.76024 51567.49305 61830.5057 64192.29533 47982.47835 72508.25712 0.975846881 0.886561051 0.869858767 0.757210966 0.791065218 0.711194767 0.852737442 0.885310141 0.66175192 1 16.14585768 -5.054969562 1.495978161 0.802192947 0.990791982 0.23989063 0.090156165 0.92690696 2.7862534 0.02513885 0.223588406 8.81E-06 5.054969562 0.188599035 RYS(ph)DFEWLR ddPTM_A459_MK2206_30min_R1 4 RYSDFEWLR 9 1 O60493-4;O60493;O60493-3 O60493-4 SNX3 Sorting nexin-3 1 RY(0.185)S(0.815)DFEWLR;RY(0.496)S(0.504)DFEWLR;RY(0.122)S(0.878)DFEWLR;RY(0.013)S(0.987)DFEWLR 113.77 0.0045814 28642900 5209.17 6094.32 6740.42 5342.7 6521 5993.67 5983.1 5620.97 5530.78 5165.7 TRUE FALSE 4766.102737 5697.57866 6282.89907 5754.19568 6261.254762 6333.026416 5583.978316 5571.826452 6105.724373 5805.665915 0.82093989 0.981382454 1.082201278 0.991134482 1.078473142 1.090835489 0.961815302 0.959722198 1.051683728 1 12.50324584 -4.793974361 3.478805434 1.026435415 0.798697656 0.640937103 0.046171882 0.183460177 3.670792868 0.012210087 0.108989834 1.61E-05 4.793974361 -0.227737759 RYS(ph)DFEWLR ddPTM_A459_MK2206_30min_R2 2 RYSDFEWLR 9 1 O60493-4;O60493;O60493-3 O60493-4 SNX3 Sorting nexin-3 1 RY(0.049)S(0.951)DFEWLR;RY(0.083)S(0.917)DFEWLR 96.756 0.010884 4997200 11111.7 11594.1 10971 10287.6 13980.1 11845.2 12027.3 9910.3 9189.6 11645.1 TRUE FALSE 11962.4203 11018.35385 11336.76766 9447.070172 13431.17103 12295.97739 10448.10106 11205.61024 9988.894797 11265.12134 1.06189893 0.978094556 1.006360013 0.838612376 1.192279304 1.09150865 0.92747346 0.994717225 0.886709916 1 13.45957523 -7.285998587 24.76907988 0.951784917 1.023709453 0.146119853 0.08950268 1602.638564 1616326.238 0.038830041 0.026191002 5.18E-08 7.285998587 0.071924537 RYS(ph)DHAGPAIPSVVAYPK ddPTM_A459_MK2206_30min_R2 1 RYSDHAGPAIPSVVAYPK 18 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YIY6;P27448-6;P27448-7 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 RY(0.01)S(0.99)DHAGPAIPSVVAYPK 90.778 0.0028842 5472900 35057 38284 34660 40051 39558 39282 33182 25531 32028 30363 TRUE FALSE 37740.99087 36382.87223 35815.5471 36778.70518 38004.75416 40776.90404 28825.16354 28867.98936 34813.73755 29372.2578 1.284919639 1.238681496 1.219366497 1.252157918 1.293899653 1.388279523 0.981373776 0.982831812 1.185259158 1 14.84216655 -7.270274738 24.99747866 1.035935494 1.274364535 0.746889963 0.069026642 342.7318682 969672.0831 0.02921167 0.020030468 5.37E-08 7.270274738 0.23842904 RYS(ph)DLTTLVAFPSSSVYPTK ddPTM_A459_MK2206_30min_R2 1 RYSDLTTLVAFPSSSVYPTK 20 1 J3KQ69;A0A499FHX9;P25205;P25205-2 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 RY(0.044)S(0.441)DLT(0.257)T(0.257)LVAFPSSSVYPTK 84.312 0.0013243 1910800 9725.2 6709.2 8320 10893 7753.2 8394.3 11434 9564.3 8037.9 10842 TRUE FALSE 10469.76879 6376.030884 8597.384647 10003.00706 7448.770411 8713.750969 9932.702065 10814.38685 8737.022013 10488.22643 0.998240156 0.607922696 0.819717681 0.953736757 0.710203051 0.830812629 0.947033527 1.031097767 0.833031406 1 13.35648312 -7.243407849 4.734835608 0.956496758 0.810463214 0.244498758 0.113925389 0.268174471 16.65943467 0.045018191 0.032744395 5.71E-08 7.243407849 -0.146033544 RYS(ph)GDSDSSASSAQSGPLGTR ddPTM_A459_MK2206_30min_R1 1 RYSGDSDSSASSAQSGPLGTR 21 1 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 RYS(0.866)GDS(0.134)DSSASSAQSGPLGTR 181.6 3.70E-14 4253400 974.85 861.87 864.63 876.14 909.29 1016.3 1017.4 783.66 651.48 724.65 TRUE FALSE 891.9338884 805.7621063 805.9413246 943.6204546 873.0710538 1073.842028 949.5311024 776.8085432 719.2036773 814.4251128 1.095169923 0.989363041 0.989583096 1.158633789 1.072009004 1.318527647 1.165891237 0.95381212 0.88308141 1 9.669638237 -7.819223313 7.382185609 0.93660984 1.111248266 0.402607812 0.093139994 0.257773502 27.32774078 0.056451765 0.02709074 1.52E-08 7.819223313 0.174638427 RYS(ph)GNMEYVISR ddPTM_A459_MK2206_30min_R1 2 RYSGNMEYVISR 12 1 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 RYS(1)GNMEYVISR;RYS(1)GNMEYVISR 157.33 0.00079682 24929000 2453.12 2566.7 2786.2 2256.1 2472.6 2130.28 3055.2 2296.95 2116.37 2133.02 TRUE FALSE 2244.469262 2399.607363 2597.080507 2429.865213 2374.111106 2250.894613 2851.393183 2276.868008 2336.374235 2397.274621 0.936258717 1.000973081 1.083347099 1.013594851 0.990337563 0.93893899 1.18943118 0.949773542 0.974595991 1 11.22717947 RYS(ph)GNMEYVISR ddPTM_A459_MK2206_30min_R2 1 RYSGNMEYVISR 12 1 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 RYS(1)GNMEYVISR 122.08 0.0018634 10625000 15955 17332 19568 14819 19702 23115 24180 18482 15446 18553 TRUE FALSE 17176.52707 16471.31808 20220.38735 13608.2403 18928.40049 23994.65752 21005.13695 20897.66086 16789.46516 17947.61713 0.957036633 0.917744008 1.126633536 0.758219891 1.054646996 1.3369272 1.170357981 1.16436966 0.935470433 1 14.13150469 -6.518997461 24.99382109 1.141537651 0.946009156 0.294231292 0.130704281 192.316904 1238449.373 0.042152979 0.043075895 3.03E-07 6.518997461 -0.195528494 RYS(ph)PDELR ddPTM_A459_MK2206_30min_R1 2 RYSPDELR 8 1 S5FZ81;Q8WUB8-2;Q8WUB8;Q8WUB8-3 S5FZ81 PHF10 PHD finger protein 10 1 RY(0.041)S(0.959)PDELR;RY(0.051)S(0.949)PDELR 80.245 0.02393 9759500 1117.16 1275.69 1203.61 949.7 1293.2 1226.71 1313.26 1156.11 1138.27 1285.24 TRUE FALSE 1022.139676 1192.642349 1121.912307 1022.846059 1241.689106 1296.16526 1225.654822 1146.002252 1256.59724 1444.465234 0.707624975 0.825663589 0.776697341 0.708114003 0.859618547 0.897332265 0.848518048 0.793374756 0.869939414 1 10.49631977 -6.342400894 7.598049102 0.86775524 0.761350084 0.510341798 0.058656482 0.275223709 22.99843987 0.017881148 0.020290433 4.55E-07 6.342400894 -0.106405157 RYS(ph)PDELR ddPTM_A459_MK2206_30min_R2 1 RYSPDELR 8 1 S5FZ81;Q8WUB8-2;Q8WUB8;Q8WUB8-3 S5FZ81 PHF10 PHD finger protein 10 1 RY(0.005)S(0.995)PDELR 92.112 0.013307 2145500 7260 6393.9 5249.6 6847.1 7998.1 7224.8 7025.7 5762.5 5102.7 7322.8 TRUE FALSE 7815.831182 6076.388224 5424.619044 6287.670027 7684.054407 7499.744827 6103.217151 6515.678536 5546.523622 7083.857636 1.103329793 0.857779551 0.765771889 0.887605363 1.08472739 1.05870914 0.861566884 0.919792417 0.782980673 1 12.7903195 -12.02125296 2.321210052 2.096186915 0.92361006 0.037507661 0.114321117 5824174.818 1993346.737 33509441.88 0.030893658 9.52E-13 12.02125296 -1.172576854 RYS(ph)PPIQR ddPTM_A459_MK2206_30min_R1 1 RYSPPIQR 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RY(0.247)S(0.753)PPIQR 72.006 0.034457 794840000 1481.7 1587 1602.9 1412 1650.5 1817.9 1634.8 1617.6 1466.3 1325.2 TRUE FALSE 1355.673634 1483.686012 1494.099614 1520.752485 1584.75709 1920.827927 1525.745475 1603.457494 1618.727132 1489.375781 0.910229407 0.996179763 1.003171687 1.021067016 1.064041131 1.28968656 1.024419421 1.076596998 1.086849372 1 10.54049209 -5.921800528 1.674194767 1.099768888 0.961494277 0.342184538 0.076192795 0.424360524 2.416826275 0.025665351 0.04638627 1.20E-06 5.921800528 -0.138274611 RYS(ph)PPIQR ddPTM_A459_MK2206_30min_R2 1 RYSPPIQR 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RY(0.001)S(0.999)PPIQR 78.655 0.025901 583630000 12745 16231 13535 15670 16259 16377 18992 13286 17095 15710 TRUE FALSE 13720.767 15424.99214 13986.25014 14389.71087 15620.58997 17000.23821 16498.32759 15022.52582 18581.8922 15197.38399 0.902837423 1.014976798 0.920306426 0.946854464 1.027847291 1.118629247 1.085603128 0.988494193 1.222703343 1 13.89153539 -6.438700943 3.370656958 1.082308846 0.949524282 0.483321726 0.066478975 0.218327855 4.742394676 0.020832428 0.023322148 3.64E-07 6.438700943 -0.132784565 RYS(ph)PSPPPK ddPTM_A459_MK2206_30min_R2 1 RYSPSPPPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RY(0.007)S(0.991)PS(0.002)PPPK 76.332 0.029167 12861000 72044 78721 71104 83650 79493 68493 78425 73942 67405 70042 TRUE FALSE 77559.74403 74811.82961 73474.57187 76815.52742 76371.7054 71099.54911 68127.70329 83606.47328 73267.76506 67756.53528 1.144682852 1.104127141 1.084390924 1.133699164 1.127148918 1.049338618 1.005477966 1.23392486 1.081338719 1 16.04807248 -6.726735916 24.98745493 1.084352631 1.116909132 0.10194748 0.062707617 612.065306 440702.9385 0.021128964 0.021128099 1.88E-07 6.726735916 0.032556501 RYSGDS(ph)DSSASSAQSGPLGTR ddPTM_A459_MK2206_30min_R1 1 RYSGDSDSSASSAQSGPLGTR 21 1 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 RYS(0.024)GDS(0.553)DS(0.282)S(0.082)AS(0.046)S(0.013)AQSGPLGTR 176.7 9.02E-12 0 502.33 495.55 294.62 330.33 489.61 377.22 459.32 346.36 384.28 224.51 TRUE FALSE 459.6041957 463.2896049 274.6220153 355.7720738 470.1077969 398.5778704 428.6796009 343.331811 424.2272812 252.3239938 1.82148431 1.836090171 1.088370595 1.409981146 1.863111747 1.579627306 1.698925237 1.360678412 1.681279988 1 7.97913359 -11.97285518 0.510550868 1.04E-11 1.590141146 0.36562637 0.233892319 172.4884748 9.79524546 192.9395234 0.113783035 1.06E-12 11.97285518 1.590141146 RYWEEETVPTTAGAS(ph)PGPPR ddPTM_A459_MK2206_30min_R1 2 RYWEEETVPTTAGASPGPPR 20 1 O15213 O15213 WDR46 WD repeat-containing protein 46 1 RYWEEETVPTTAGAS(1)PGPPR;RYWEEETVPT(0.003)T(0.268)AGAS(0.729)PGPPR 237.16 1.15E-29 31389600 2330.55 2636.17 2269.88 2511.9 2673.24 2891.44 2539.43 2362.16 2261.09 1549.69 TRUE FALSE 2132.324484 2464.554854 2115.80687 2705.366973 2566.75919 3055.150834 2370.029258 2341.507884 2496.138397 1741.677297 1.224293667 1.415046782 1.214809927 1.55331127 1.473728339 1.754142883 1.360774044 1.344398235 1.433180763 1 10.76626163 -9.612157578 1.024757186 0.995376732 1.428721587 0.41406935 0.149286746 11.89015622 10.02790432 0.372909775 0.047431009 2.44E-10 9.612157578 0.433344856 RYWEEETVPTTAGAS(ph)PGPPR ddPTM_A459_MK2206_30min_R2 3 RYWEEETVPTTAGASPGPPR 20 1 O15213 O15213 WDR46 WD repeat-containing protein 46 1 RYWEEETVPTT(0.001)AGAS(0.999)PGPPR;RYWEEET(0.004)VPT(0.031)T(0.031)AGAS(0.934)PGPPR;RYWEEETVPT(0.005)T(0.005)AGAS(0.991)PGPPR 149.33 3.00E-05 36153400 44501.9 58496 42261.7 58392.5 57276 51801.5 60668.9 54254.8 55614.7 52245.3 TRUE FALSE 47908.99968 55591.1737 43670.68398 53621.64596 55027.05645 53772.84238 52703.00055 61346.08864 60451.96608 50540.54014 0.947932087 1.099932323 0.864072364 1.060963057 1.088770644 1.063954644 1.04278665 1.213799625 1.196108429 1 15.62515346 -6.601061051 0.937001368 1.132959165 0.98510738 0.291429705 0.083929993 0.686533424 1.313675227 0.046810069 0.051052312 2.51E-07 6.601061051 -0.147851785 S(ph)AAQAAAQTNSNAAGK ddPTM_A459_MK2206_30min_R2 1 SAAQAAAQTNSNAAGK 16 0 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 S(1)AAQAAAQTNSNAAGK 223.65 6.55E-51 0 3800.6 4162.3 3269.4 4602.5 5972.8 2194.2 4898.5 4741.3 2773.8 3667.5 TRUE FALSE 4091.576858 3955.606235 3378.400164 4226.461027 5738.277861 2277.701819 4255.321066 5361.004189 3015.06011 3547.829775 1.153261886 1.114936873 0.952244154 1.191280669 1.617405069 0.64199862 1.19941523 1.511065786 0.849832236 1 11.79272108 S(ph)AASPVVSSMPER ddPTM_A459_MK2206_30min_R1 1 SAASPVVSSMPER 13 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 S(0.618)AAS(0.382)PVVSSMPER 179.46 0.00010955 54131000 2136 2048.7 2112.8 1679.3 2341.5 2334.2 2417.8 2124.9 2160.2 2032.7 TRUE FALSE 1954.321983 1915.329258 1969.389023 1808.639977 2248.233097 2466.360387 2256.512974 2106.322223 2384.76052 2284.526222 0.855460517 0.838392328 0.862055775 0.791691494 0.9841135 1.079593818 0.98773783 0.921995205 1.043875311 1 11.15767929 -6.329476597 6.313500166 1.003153176 0.839046063 0.790044305 0.041956619 0.109031176 8.124342954 0.013440758 0.015310833 4.68E-07 6.329476597 -0.164107114 S(ph)AASPVVSSMPER ddPTM_A459_MK2206_30min_R2 2 SAASPVVSSMPER 13 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 S(0.976)AAS(0.024)PVVSSMPER;S(0.981)AAS(0.019)PVVSSMPER 226.42 7.11E-13 143496000 190068 214697 158014 204310 224150 187959 245790 176347 173548 190539 TRUE FALSE 204619.7522 204035.4592 163282.1079 187617.2194 215348.7447 195111.9115 213517.4778 199396.1584 188642.8913 184321.728 1.110122797 1.106952834 0.885853825 1.017879018 1.168330761 1.058539943 1.158395595 1.081783252 1.023443592 1 17.49186662 -5.053367265 24.99996671 1.055347134 1.109334314 0.083734276 0.076358989 838.8789983 392973.5629 0.020740234 0.054874354 8.84E-06 5.053367265 0.05398718 S(ph)ADNTLER ddPTM_A459_MK2206_30min_R2 1 SADNTLER 8 0 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7 A0A087WT53 MAGI1 "Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1" 1 S(1)ADNTLER 111.5 0.011574 9428900 8686.2 14996 8828.8 12302 10277 9890.1 11124 7978.4 9518.2 9186.9 TRUE FALSE 9351.222151 14251.32045 9123.147785 11296.88725 9873.473342 10266.47469 9663.405438 9021.204274 10346.07583 8887.132205 1.052220439 1.603590463 1.026557001 1.271151029 1.110985312 1.155206702 1.087348001 1.015086089 1.164163601 1 13.11750223 -6.189736732 0.68955702 1.061627106 1.302024184 0.189280443 0.153749419 1.277113989 1.271617409 0.089140457 0.180056236 6.46E-07 6.189736732 0.240397078 S(ph)ADSVMAEQVALSR ddPTM_A459_MK2206_30min_R2 1 SADSVMAEQVALSR 14 0 P11413-3 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 1 S(0.862)ADS(0.138)VMAEQVALSR 110.57 0.005357 0 9556.9 9305.1 10123 9878.9 10512 8587.3 11068 7667.2 6891.9 8935.5 TRUE FALSE 10288.58361 8843.022265 10460.49577 9071.762269 10099.24606 8914.095719 9614.758305 8669.329365 7491.345004 8643.935367 1.190266143 1.023031974 1.210154325 1.049494459 1.168362052 1.031254323 1.11231261 1.002937782 0.866659072 1 13.07747257 -7.911490079 3.376334695 0.931902479 1.109480112 0.534610231 0.068300591 0.170907891 3.785504086 0.040493869 0.016934317 1.23E-08 7.911490079 0.177577633 S(ph)ADWTEELGAR ddPTM_A459_MK2206_30min_R1 1 SADWTEELGAR 11 0 Q9NZ56 Q9NZ56 FMN2 Formin-2 1 S(1)ADWTEELGAR 138.89 0.0012132 2993100 672.88 441.04 514.75 642.19 617.11 770.87 789.93 606.52 493.65 481.69 TRUE FALSE 615.6480226 412.3282158 479.8102042 691.6515851 592.5292019 814.5159932 737.235211 601.2172596 544.966684 541.3653938 1.137213478 0.761644946 0.886296408 1.277605833 1.094508827 1.504558663 1.361807052 1.110557244 1.006652236 1 9.080458857 -5.757039901 24.99965648 1.214104233 0.911710871 0.325745091 0.17266485 118.3783742 672664.3001 0.048698334 0.08074264 1.75E-06 5.757039901 -0.302393362 S(ph)ADWTEELGAR ddPTM_A459_MK2206_30min_R2 1 SADWTEELGAR 11 0 Q9NZ56 Q9NZ56 FMN2 Formin-2 1 S(0.999)ADWT(0.001)EELGAR 107.39 0.010575 2579300 4992 3718.7 1390.5 6545.6 4101.3 5632.6 2788.7 3394.2 4849.6 3676.6 TRUE FALSE 5374.191358 3534.034765 1436.858576 6010.803542 3940.262355 5846.95254 2422.54034 3837.833594 5271.409442 3556.632843 1.511033496 0.993646216 0.403994069 1.69002644 1.107863119 1.643957304 0.681133096 1.079063756 1.482134838 1 11.79629634 -4.749459013 24.39473978 1.120359205 1.511034704 0.085625077 0.383152709 1121.183541 2282789.286 0.094597726 1.500335398 1.78E-05 4.749459013 0.390675499 S(ph)AEDELAMR ddPTM_A459_MK2206_30min_R2 1 SAEDELAMR 9 0 Q13868-3;Q13868;A3KFL1;A3KFL5;A3KFL2;Q13868-2 Q13868-3 EXOSC2 Exosome complex component RRP4 1 S(1)AEDELAMR 100.69 0.017694 9625300 34081 38278 36508 37108 33429 25997 41166 35998 31446 35829 TRUE FALSE 36690.26756 36377.17018 37725.1585 34076.1577 32116.40949 26986.33405 35760.85475 40703.0622 34181.11624 34659.90266 1.058579648 1.04954623 1.088438097 0.983157917 0.926615686 0.778603861 1.031764431 1.174355929 0.986186158 1 15.08097998 -10.88089425 14.7121469 1.000008349 1.007771354 0.000607391 0.099667226 0 0 0.106148193 0.025744718 1.32E-11 10.88089425 0.007763005 S(ph)AEEGELAESK ddPTM_A459_MK2206_30min_R1 3 SAEEGELAESK 11 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(1)AEEGELAESK;S(1)AEEGELAESK;S(1)AEEGELAESK 190.85 1.99E-05 61103000 7108.7 7763.5 7134.2 5168.5 4640.2 4595.2 6014.1 5651.7 6724.1 8030.3 TRUE FALSE 6504.067736 7258.094739 6649.950381 5566.578766 4455.371008 4855.376253 5612.910362 5602.287783 7423.094257 9025.15419 0.720660013 0.804207284 0.736824019 0.616784893 0.493661484 0.537982637 0.621918501 0.620741504 0.822489467 1 13.13973586 -8.508865491 2.872938808 0.998785906 0.642389337 0.628041609 0.087473834 0.182196999 3.58911219 0.098919096 0.026517309 3.10E-09 8.508865491 -0.356396569 S(ph)AEEGELAESK ddPTM_A459_MK2206_30min_R2 3 SAEEGELAESK 11 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(1)AEEGELAESK;S(1)AEEGELAESK;S(1)AEEGELAESK 166.62 0.00058404 177816000 96799 89094.3 91460 79391 71884 54915 85642 59884.1 51278.5 65099.5 TRUE FALSE 104210.0059 84670.00662 94509.23075 72904.50134 69061.47297 57004.82881 74397.10253 67711.15748 55738.61124 62975.30865 1.654775627 1.344495302 1.500734697 1.157668027 1.09664366 0.905193321 1.181369399 1.075201677 0.88508675 1 15.94249867 -5.872281343 1.784313175 1.024320811 1.510999195 0.792508474 0.10862469 0.156815955 1.017743572 0.034079476 0.063086538 1.34E-06 5.872281343 0.486678384 S(ph)AEPRPELGPGQET(ph)GTNSR ddPTM_A459_MK2206_30min_R2 1 SAEPRPELGPGQETGTNSR 19 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 2 S(1)AEPRPELGPGQET(0.491)GT(0.341)NS(0.168)R 75.43 0.031312 9668700 41414 37876 50117 49904 45812 39915 42266 31021 29877 43391 TRUE FALSE 44584.68768 35995.13292 51787.87577 45826.68357 44013.19069 41433.99329 36716.42343 35075.55121 32475.64745 41975.15522 1.0621685 0.857534242 1.233774491 1.091757334 1.048553375 0.987107566 0.874717991 0.83562648 0.77368737 1 15.35724804 -7.124417043 2.251506437 0.852659411 1.059281873 0.435264249 0.100306391 0.292239955 2.9063857 0.045969494 0.033207015 7.51E-08 7.124417043 0.206622462 S(ph)AEPRPELGPGQETGTNS(ph)R ddPTM_A459_MK2206_30min_R2 1 SAEPRPELGPGQETGTNSR 19 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 2 S(0.992)AEPRPELGPGQET(0.017)GT(0.017)NS(0.975)R 120.33 0.015011 6322500 17211 19394 21145 24051 18280 21388 23300 16667 17626 24264 TRUE FALSE 18528.68739 18430.92216 21849.96375 22085.95636 17562.23535 22201.93533 20240.68201 18845.43413 19159.07762 23472.26767 0.789386337 0.785221199 0.930884227 0.940938331 0.748212128 0.945879437 0.862323245 0.802880846 0.816243147 1 14.51866961 -12.06821743 2.111148854 3.132844642 0.849477826 0.315146647 0.067617137 7302376.736 273890.915 75063654.8 0.018078492 8.55E-13 12.06821743 -2.283366816 S(ph)AEPSPTVMSTSLGSNLSELDR ddPTM_A459_MK2206_30min_R1 2 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 S(0.997)AEPS(0.003)PTVMSTSLGSNLSELDR;S(0.999)AEPS(0.001)PTVMSTSLGSNLSELDR 305.85 5.79E-203 0 1377.77 1743.2 1885.9 1567.89 1684.41 1284.12 1832.99 1432.36 1188.9 1211.39 TRUE FALSE 1260.583427 1629.717363 1757.890362 1688.649159 1617.316383 1356.825765 1710.714582 1419.837028 1312.49041 1361.466139 0.925901417 1.197031139 1.291174501 1.240316679 1.187922591 0.996591635 1.256523782 1.042873552 0.964027215 1 10.41094539 -7.950429277 6.732323972 0.988555096 1.161313885 0.307245645 0.108389944 0.233986624 24.12815066 0.062051332 0.029204227 1.12E-08 7.950429277 0.172758789 S(ph)AEPSPTVMSTSLGSNLSELDR ddPTM_A459_MK2206_30min_R2 1 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 S(0.488)AEPS(0.185)PT(0.326)VMSTSLGSNLSELDR 80.362 0.0011852 6676200 6163.1 6711.4 4636.7 4863.3 7830 6286.2 6259.4 5548.9 6253.1 3751.6 TRUE FALSE 6634.951675 6378.121635 4791.285264 4465.952833 7522.554857 6525.425746 5437.533261 6274.160282 6796.983335 3629.185599 1.828220545 1.757452591 1.320209489 1.230566118 2.072794199 1.798041342 1.49827919 1.728806673 1.872867383 1 11.82543012 -10.75457054 4.563662129 0.999791656 1.668466535 0.407538976 0.245180438 0.00054919 9.25E-05 0.250849195 0.06082121 1.76E-11 10.75457054 0.668674879 S(ph)AESPSWTPAEHVAK ddPTM_A459_MK2206_30min_R2 1 SAESPSWTPAEHVAK 15 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 S(0.477)AES(0.477)PS(0.046)WTPAEHVAK 128.59 0.00063299 20676000 64297 82864 75418 99494 92367 91992 104160 75135 78172 82234 TRUE FALSE 69219.62776 78749.09426 77932.39848 91365.02193 88740.20747 95492.82002 90483.66688 84955.40248 84971.25926 79550.71131 0.870132103 0.989923194 0.97965684 1.148512948 1.115517461 1.200401837 1.137433788 1.067940199 1.068139528 1 16.27958721 -5.37970669 1.601964215 1.113662853 0.898606807 0.601143005 0.05915056 0.301572858 1.376601515 0.017879868 0.069739472 4.17E-06 5.37970669 -0.215056046 S(ph)AGEEEDGPVLTDEQK ddPTM_A459_MK2206_30min_R1 4 SAGEEEDGPVLTDEQK 16 0 H7BZV4;A0A0C4DG62;Q66PJ3-4;Q66PJ3-3;F5H7X4;Q66PJ3-7;Q66PJ3;F5GYV5;F8WCT1;Q66PJ3-2 H7BZV4;F5H7X4;Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK 383.36 8.36E-247 308943000 14236.7 15765.5 16289 14570.1 12790 10570 13282.2 14564.7 14056.4 12835.7 TRUE FALSE 13025.79391 14739.16308 15183.34806 15692.29163 12280.54722 11168.46427 12396.16867 14437.36236 15517.61308 14425.88342 0.902946012 1.021716498 1.052507332 1.08778722 0.851285627 0.77419621 0.859300489 1.000795719 1.075678531 1 13.81637205 -4.478086262 11.91961469 0.962369347 0.699779969 0.033620209 0.10073735 118965.6209 1288611.962 0.028372552 636365.3593 3.33E-05 4.478086262 -0.262589378 S(ph)AGEEEDGPVLTDEQK ddPTM_A459_MK2206_30min_R2 4 SAGEEEDGPVLTDEQK 16 0 H7BZV4;A0A0C4DG62;Q66PJ3-4;Q66PJ3-3;F5H7X4;Q66PJ3-7;Q66PJ3;F5GYV5;F8WCT1;Q66PJ3-2 H7BZV4;F5H7X4;Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK 364.82 4.79E-197 632028000 288265 299044 296404 287725 306884 220259 373524 272037 249264 318668 TRUE FALSE 310334.79 284193.9098 306285.9614 264216.9471 294834.1922 228641.1106 324479.8501 307593.1699 270944.5322 308269.8893 1.006698354 0.921899672 0.993564315 0.857096189 0.956415798 0.741691351 1.052583666 0.997804783 0.878919874 1 18.23383445 -9.757351828 8.376852488 0.999999999 0.933561111 0.050468375 0.085760095 0 0 0.081394599 0.01974109 1.75E-10 9.757351828 -0.066438888 S(ph)AKPETVIDSLLQ ddPTM_A459_MK2206_30min_R2 1 SAKPETVIDSLLQ 13 1 H7C2F6;J3KPF9;A0A087X011;E9PES4;Q9Y496 H7C2F6 KIF3A Kinesin-like protein;Kinesin-like protein KIF3A 1 S(0.988)AKPET(0.011)VIDSLLQ 103.66 0.039449 2690700 38057 47631 36070 36234 32334 28631 34366 24576 26390 28947 TRUE FALSE 40970.67318 45265.7138 37272.5558 33273.56629 31064.40469 29720.57277 29853.70292 27788.16758 28685.3545 28002.46176 1.463109691 1.616490514 1.331045681 1.188237183 1.109345491 1.061355713 1.066109943 0.992347309 1.024386882 1 14.77326604 -5.726988618 1.226134803 1.032166483 1.566614568 0.936893543 0.051307835 0.1090523 0.31916636 0.017481266 0.048028536 1.88E-06 5.726988618 0.534448085 S(ph)AKSEESLTSLHAVDGDSK ddPTM_A459_MK2206_30min_R2 1 SAKSEESLTSLHAVDGDSK 19 1 G3V174;A7KAX9-2;A7KAX9 G3V174 ARHGAP32 Rho GTPase-activating protein 32 1 S(0.3)AKS(0.3)EES(0.225)LT(0.045)S(0.13)LHAVDGDSK 63.268 0.015914 5856300 23287 37674 28858 41332 38169 31449 46008 33841 31290 31931 TRUE FALSE 25069.87062 35803.16394 29820.11132 37955.04339 36670.29328 32645.81373 39967.09433 38264.13489 34011.54764 30889.09409 0.811609125 1.159087536 0.965392874 1.228752235 1.187159882 1.056871841 1.293890142 1.238758728 1.101085954 1 14.91480994 -4.163159298 1.176843965 1.159052943 5.55E-30 0.440243688 0.105138522 5.214322932 2.187756164 0.030655607 10.57963669 6.87E-05 4.163159298 -1.159052943 S(ph)ALAAAILATTLTGR ddPTM_A459_MK2206_30min_R1 1 SALAAAILATTLTGR 15 0 K7EQI2;A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8 K7EQI2 CEP89 Centrosomal protein of 89 kDa 1 S(1)ALAAAILATTLTGR 94.339 0.011544 1138700 233.9 396.75 477.39 470.54 277.18 280.18 350.71 291.95 296.94 116.8 TRUE FALSE 214.0055767 370.9215029 444.9860969 506.7810723 266.1393337 296.0435495 327.3147758 289.3975119 327.8079756 131.2700658 1.630269441 2.825636604 3.389852014 3.860598905 2.0274183 2.255225117 2.49344566 2.204596381 2.497202798 1 7.036394158 -6.339158634 24.99999985 2.169345325 2.952513855 0.275692757 0.66249364 170.6572139 54894.10626 0.208902189 0.23687284 4.58E-07 6.339158634 0.78316853 S(ph)ALAAAILATTLTGR ddPTM_A459_MK2206_30min_R2 1 SALAAAILATTLTGR 15 0 K7EQI2;A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8 K7EQI2 CEP89 Centrosomal protein of 89 kDa 1 S(1)ALAAAILATTLTGR 88.311 0.017757 515910 1030.4 986.69 2702.7 2369.7 2169.5 995.3 1035.8 942.54 831.05 807.63 TRUE FALSE 1109.288216 937.6924094 2792.806669 2176.08793 2084.314529 1033.176839 899.7982158 1065.733214 903.3332268 781.2770992 1.419839667 1.200204652 3.574668542 2.785295936 2.667830058 1.322420483 1.151701767 1.364091198 1.156226424 1 9.609690516 -6.813207468 7.228406869 1.211563569 2.360466993 0.439990986 0.63752466 0.235941579 26.81381553 0.247564437 0.219650871 1.54E-07 6.813207468 1.148903424 S(ph)ALSGHLETVILGLLK ddPTM_A459_MK2206_30min_R1 1 SALSGHLETVILGLLK 16 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 S(0.499)ALS(0.499)GHLET(0.001)VILGLLK 83.499 0.012172 11384000 1037.3 1084.4 1114.8 661.13 1425.4 1143.7 1418.2 1207.7 957.99 878.51 TRUE FALSE 949.0721879 1013.805363 1039.130482 712.0503472 1368.6233 1208.455306 1323.594466 1197.141206 1057.576489 987.3464512 0.961235225 1.026798002 1.05244768 0.72117578 1.386163183 1.223942522 1.340557273 1.212483424 1.071130085 1 9.947412592 -6.270850247 24.99976597 1.223990629 0.954586833 0.475984062 0.135231087 573.1715928 1522615.38 0.041174233 0.047301702 5.36E-07 6.270850247 -0.269403795 S(ph)APAS(ph)PTHPGLMS(ph)PR ddPTM_A459_MK2206_30min_R1 1 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 3 S(0.995)APAS(0.855)PT(0.156)HPGLMS(0.994)PR 81.606 0.019776 6623900 898.88 670.72 882.1 793.39 813.27 646.55 853.7 700.31 590.69 423.67 TRUE FALSE 822.4255358 627.0560061 822.2255097 854.4970353 780.8757338 683.1571023 796.7512307 694.1872635 652.0943393 476.1574381 1.727213459 1.31690898 1.726793375 1.794568281 1.639952821 1.434729456 1.673293677 1.457894402 1.369493128 1 8.895294859 -8.67152469 0.88367058 0.998609411 1.619698311 0.655461441 0.136911351 0.497004773 0.816410081 0.134471963 0.046287007 2.13E-09 8.67152469 0.6210889 S(ph)APAS(ph)PTHPGLMSPR ddPTM_A459_MK2206_30min_R1 2 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(1)APAS(0.714)PT(0.286)HPGLMSPR;S(1)APAS(0.531)PT(0.466)HPGLMS(0.003)PR 171.15 2.46E-05 2144200 2352.1 1913.87 2075.58 1825.67 2582.66 2529.55 2349.08 1789.63 1617.64 1590.53 TRUE FALSE 2152.041544 1789.276715 1934.695412 1966.28342 2479.787183 2672.770935 2192.377159 1773.983454 1785.799467 1787.576864 1.203887557 1.000950925 1.082300544 1.099971396 1.387233877 1.495192172 1.226451966 0.992395622 0.999005695 1 10.80378956 -7.762805891 24.84745481 0.996775425 1.213600562 0.347317714 0.136054246 45.56946175 828528.062 0.081496385 0.04251157 1.73E-08 7.762805891 0.216825137 S(ph)APAS(ph)PTHPGLMSPR ddPTM_A459_MK2206_30min_R2 2 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(1)APAS(0.914)PT(0.086)HPGLMSPR;S(1)APAS(0.998)PT(0.002)HPGLMSPR 145.94 0.0064276 53903000 106751 166013 137553 154546 141380 170619 147652 118908 118999 117436 TRUE FALSE 114923.9386 157769.0358 142138.9484 141919.0974 135828.7108 177112.0256 128265.115 134449.6839 129349.3179 113604.0729 1.01161812 1.388762143 1.251178278 1.24924304 1.195632404 1.559028836 1.129053842 1.183493517 1.138597539 1 16.79365503 -8.331422591 1.171938508 1.01036491 1.269591526 0.25392284 0.137395385 0.607753522 1.734245484 0.125991055 0.040671276 4.66E-09 8.331422591 0.259226617 S(ph)APASPT(ph)HPGLMSPR ddPTM_A459_MK2206_30min_R1 1 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(1)APAS(0.113)PT(0.886)HPGLMSPR 165.89 0.014212 12430000 2043.7 2045.9 1977.1 1724.7 2322.2 2183.9 1883.2 1647.5 1590.8 1556.6 TRUE FALSE 1869.872583 1912.711538 1842.899961 1857.536693 2229.701857 2307.550531 1757.575164 1633.096081 1756.169353 1749.44336 1.068838595 1.093325787 1.053420764 1.061787272 1.274520746 1.319019857 1.004648224 0.933494687 1.003844647 1 10.77268024 -7.495561034 24.43691452 0.975016047 1.142477591 0.453952378 0.086059586 546.7790363 489119.9518 0.040585141 0.027271525 3.19E-08 7.495561034 0.167461544 S(ph)APASPT(ph)HPGLMSPR ddPTM_A459_MK2206_30min_R2 1 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(1)APAS(0.375)PT(0.625)HPGLMSPR 144.41 0.0032978 0 11051 15198 13349 18826 17577 16656 13894 11825 10553 14860 TRUE FALSE 11897.07306 14443.28942 13794.049 17287.85558 16886.83866 17289.85575 12069.70111 13370.5681 11470.88086 14375.11942 0.827615598 1.004742222 0.959578046 1.202623441 1.174726844 1.202762582 0.839624407 0.93011875 0.797967692 1 13.81128632 -7.280668192 24.79183235 0.886104263 1.066264406 0.321580243 0.120808865 956.9558815 1233803.885 0.05422121 0.03661917 5.24E-08 7.280668192 0.180160143 S(ph)APASPTHPGLMS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(0.953)APAS(0.047)PT(0.058)HPGLMS(0.942)PR 140.96 0.0070501 13420000 20669 29980 22296 26229 30202 29561 44167 38018 38113 46957 TRUE FALSE 22251.43453 28491.2368 23039.33751 24086.0068 29016.11773 30685.96457 38367.81985 42987.08314 41427.99985 45424.79694 0.489852152 0.627217703 0.507197369 0.530239174 0.638772646 0.675533335 0.844644829 0.946335175 0.912012879 1 15.47119244 -7.210387482 1.100274116 0.971366717 0.541184541 0.947272243 0.041927791 0.102875846 0.244905965 0.027726311 0.016457297 6.16E-08 7.210387482 -0.430182176 S(ph)APASPTHPGLMSPR ddPTM_A459_MK2206_30min_R2 2 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 S(0.992)APAS(0.008)PTHPGLMSPR;S(0.998)APAS(0.002)PTHPGLMSPR 203.85 8.25E-06 14971100 2935.95 7698.3 6107.1 9943.8 8865.2 10412.1 9869.2 8043.7 11481 11287.8 TRUE FALSE 3160.728589 7316.013616 6310.707666 9131.359731 8517.107704 10808.33976 8573.362185 9095.039208 12479.59663 10919.48001 0.289457793 0.669996521 0.577931152 0.836244924 0.77999206 0.989821837 0.785143814 0.83291871 1.142874625 1 13.41461654 -4.819070788 0.477971151 0.96791289 1.40E-19 0.757232752 0.112633233 2.369765536 0.429924248 0.074694925 1.298549917 1.52E-05 4.819070788 -0.96791289 down S(ph)APGTPGTPR ddPTM_A459_MK2206_30min_R1 1 SAPGTPGTPR 10 0 Q16584;Q16584-2;E9PID4 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 S(1)APGTPGTPR 105.17 0.012678 4547800 1643 1919 1315 1580.9 1588.6 1617 1956.4 1591.4 961.32 1018.9 TRUE FALSE 1503.254222 1794.072751 1225.741464 1702.661192 1525.322698 1708.553143 1825.892126 1577.486558 1061.252654 1145.129024 1.312737858 1.566699222 1.070395945 1.486872794 1.332009464 1.492018023 1.594485937 1.377562287 0.926753782 1 10.16129444 -8.242097213 7.338569524 0.962271912 1.408607827 0.601790869 0.143390303 0.104467317 30.12917627 0.103473154 0.036056845 5.73E-09 8.242097213 0.446335915 S(ph)APGTPGTPR ddPTM_A459_MK2206_30min_R2 1 SAPGTPGTPR 10 0 Q16584;Q16584-2;E9PID4 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 S(1)APGTPGTPR 115.7 0.0065656 4200400 12551 17571 13418 17198 15130 21867 16866 15983 18614 17933 TRUE FALSE 13511.91421 16698.44969 13865.34942 15792.86839 14535.92018 22699.16401 14651.47394 18072.03298 20233.01207 17347.84768 0.778881303 0.962566077 0.799254736 0.910364714 0.837909143 1.308471485 0.844570128 1.041744965 1.166312528 1 14.08246906 S(ph)APPMEGAR ddPTM_A459_MK2206_30min_R1 2 SAPPMEGAR 9 0 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 S(1)APPMEGAR;S(1)APPMEGAR 123.11 0.0057306 47103000 2263.82 1112.64 1733.26 1312.55 1434.35 1195.61 2068.64 2402.2 722.52 1200.7 TRUE FALSE 2071.270221 1040.206934 1615.61114 1413.642828 1377.216802 1263.304405 1930.6448 2381.197819 797.6285396 1349.451781 1.534897542 0.770836682 1.197235176 1.047568241 1.020575038 0.936161205 1.430688245 1.764566806 0.591075984 1 10.39815771 -7.254776126 24.87851818 1.260296659 1.070819861 0.011052673 0.337856381 1493.981968 5578076.224 0.125853278 0.095243253 5.56E-08 7.254776126 -0.189476798 S(ph)APPMEGAR ddPTM_A459_MK2206_30min_R2 4 SAPPMEGAR 9 0 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 S(1)APPMEGAR;S(1)APPMEGAR;S(1)APPMEGAR;S(1)APPMEGAR 114.89 0.0083395 102310000 158501 213245 160276 169262 272017 191115 207928 201094 215631 158117 TRUE FALSE 170635.9584 202655.5634 165619.5218 155432.7532 261336.2458 198388.0152 180626.8038 227377.6763 234386.1946 152957.6552 1.115576453 1.324912853 1.082780209 1.016181589 1.708552902 1.29701266 1.180894173 1.486540022 1.532360013 1 17.22277279 -6.216803764 24.9998958 1.379026939 1.144717616 0.249686467 0.196717901 651.4028408 364842.8717 0.057274462 0.073940691 6.07E-07 6.216803764 -0.234309322 S(ph)APPNLWAAQR ddPTM_A459_MK2206_30min_R1 1 SAPPNLWAAQR 11 0 Q92934;F5H3B1;F5H1R6 Q92934 BAD Bcl2-associated agonist of cell death 1 S(1)APPNLWAAQR 83.204 0.038534 6900800 435.82 600.01 632.88 532.44 545.31 650.54 698.75 710.03 473.03 522.19 TRUE FALSE 398.7512204 560.9492399 589.9218689 573.4486211 523.589148 687.3730126 652.1376624 703.8222826 522.2031613 586.8828395 0.679439223 0.955811283 1.005178256 0.977109199 0.892152765 1.171226975 1.111188841 1.199255175 0.889791158 1 9.196928714 -4.18360716 0.926892178 1.053164023 5.02E-33 0.520889499 0.10006977 4.628777115 1.439243348 0.034415107 6.403217649 6.55E-05 4.18360716 -1.053164023 S(ph)APPNLWAAQR ddPTM_A459_MK2206_30min_R2 2 SAPPNLWAAQR 11 0 Q92934;F5H3B1;F5H1R6 Q92934 BAD Bcl2-associated agonist of cell death 1 S(1)APPNLWAAQR;S(1)APPNLWAAQR 129.76 0.0025233 15573200 1673.3 2349.8 4753.3 5976.5 5072.9 4798.7 10864.9 7203.4 6138.9 11683.2 TRUE FALSE 1801.409135 2233.112349 4911.77265 5488.200832 4873.712457 4981.317891 9438.325579 8144.909113 6672.850425 11301.97814 0.159388835 0.197585973 0.434594067 0.485596483 0.431226498 0.440747436 0.835103861 0.72066226 0.590414381 1 13.46428768 -6.584320131 0.269523735 0.99522937 1.33E-13 0.820091203 0.106516186 1.472450829 0.209106709 0.182444075 0.488766052 2.60E-07 6.584320131 -0.99522937 down S(ph)APSS(ph)PTLDCEK ddPTM_A459_MK2206_30min_R2 2 SAPSSPTLDCEK 12 0 A6NIZ0;Q9GZM8-3;Q9GZM8;Q9GZM8-2;J3QSD2;J3QRZ1 A6NIZ0 NDEL1 Nuclear distribution protein nudE-like 1 2 S(1)APS(0.154)S(0.839)PT(0.007)LDCEK;S(1)APS(0.224)S(0.768)PT(0.008)LDCEK 177.38 0.0018863 10441900 85613 89539 83563 92318 80587 69048 93280 70087 60241 84813 TRUE FALSE 92167.59711 85092.62346 86348.94871 84775.32409 77422.74946 71675.67002 81032.22395 79247.61154 65480.65329 82045.55876 1.123370948 1.037138692 1.052451224 1.033271336 0.943655582 0.873608165 0.987649121 0.96589764 0.798101132 1 16.32413762 -6.185451469 2.477675604 0.92471126 1.067026229 0.561804156 0.058563718 0.226251351 2.723569099 0.018717827 0.025045763 6.52E-07 6.185451469 0.142314969 S(ph)APT(ph)SPTATNISSK ddPTM_A459_MK2206_30min_R1 1 SAPTSPTATNISSK 14 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 2 S(1)APT(0.738)S(0.254)PT(0.006)AT(0.002)NISSK 122.12 0.019719 0 1584.9 1551.2 1317.6 1199.9 1176 1200.6 1086.9 1033.9 1011.2 943.48 TRUE FALSE 1450.095932 1450.216598 1228.164983 1292.316506 1129.15743 1268.576934 1014.394884 1024.860721 1116.317859 1060.365425 1.367543582 1.367657379 1.158246915 1.218746363 1.064875752 1.196358259 0.956646511 0.966516539 1.052767123 1 10.05034582 -5.137394526 0.415186466 0.979828405 1.610703417 0.801472696 0.064510831 1.723978797 0.291139904 0.053112469 0.524741182 7.29E-06 5.137394526 0.630875012 S(ph)APT(ph)SPTATNISSK ddPTM_A459_MK2206_30min_R2 1 SAPTSPTATNISSK 14 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 2 S(1)APT(0.996)S(0.004)PTATNISSK 160.78 0.00011165 0 21312 27045 20906 25496 23750 20319 28049 16227 17665 17714 TRUE FALSE 22943.66311 25701.98463 21602.99561 23412.89524 22817.45567 21092.25378 24366.13261 18347.92462 19201.46977 17135.99363 1.338916412 1.499882947 1.260679484 1.36629925 1.331551362 1.230874278 1.421927035 1.07072429 1.120534367 1 14.06474223 -7.770891649 24.99003533 1.071721861 1.347679986 0.747342157 0.076224894 101.9402732 269506.4332 0.040456473 0.019841148 1.69E-08 7.770891649 0.275958125 S(ph)APTS(ph)PTATNISSK ddPTM_A459_MK2206_30min_R2 1 SAPTSPTATNISSK 14 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 2 S(1)APT(0.286)S(0.663)PT(0.025)AT(0.025)NIS(0.001)SK 124.78 0.026086 7053800 24389 29253 24642 31007 27907 19705 24163 18487 19986 20534 TRUE FALSE 26256.24059 27800.33856 25463.55198 28473.62891 26811.23096 20454.88758 20990.36908 20903.31438 21724.34615 19863.97726 1.321801785 1.399535359 1.281895949 1.433430402 1.349741323 1.029747835 1.056705251 1.05232271 1.093655408 1 14.27786689 -6.757990518 24.98106069 1.050395073 1.35967095 0.925280152 0.044149989 20.97289786 151912.5889 0.014143786 0.013599528 1.75E-07 6.757990518 0.309275877 S(ph)AQWLDQEEAPK ddPTM_A459_MK2206_30min_R2 1 SAQWLDQEEAPK 12 0 Q53H47-3;Q53H47 Q53H47-3 SETMAR Histone-lysine N-methyltransferase SETMAR;Histone-lysine N-methyltransferase;Transposon Hsmar1 transposase 1 S(1)AQWLDQEEAPK 128.85 0.0023933 1755500 9517.4 12267 11157 10089 8232.3 11759 13599 6754.6 10572 11484 TRUE FALSE 10246.05946 11657.83862 11528.96881 9264.696427 7909.058538 12206.49698 11813.43496 7637.449412 11491.53345 11109.27802 0.92229751 1.0493786 1.037778404 0.833960264 0.711932722 1.098766001 1.063384582 0.687483867 1.034408665 1 13.43947744 -5.743341934 24.97517817 0.910473964 1.00777423 0.071927408 0.136801057 632.0111121 872192.9386 0.037876527 0.06543667 1.81E-06 5.743341934 0.097300266 S(ph)ASADNLTLPR ddPTM_A459_MK2206_30min_R1 2 SASADNLTLPR 11 0 Q8ND76-3;Q8ND76-2;Q8ND76 Q8ND76-3 CCNY Cyclin-Y 1 S(0.612)AS(0.388)ADNLTLPR;S(0.788)AS(0.212)ADNLTLPR 102.9 0.01382 42235000 6627.5 5254.6 4861.6 4514.2 6314.1 5503 6702.2 5786.9 6071.7 5411.1 TRUE FALSE 6063.796323 4912.524585 4531.608137 4861.884466 6062.596027 5814.575104 6255.108467 5736.305743 6702.874943 6081.46792 0.997094189 0.80778599 0.745150381 0.799459034 0.996896819 0.956113751 1.028552407 0.943243608 1.102180433 1 12.57020388 -6.268427057 24.00009414 1.000443556 0.828671794 0.556876177 0.072816053 238.0458126 817598.4359 0.022640124 0.026262409 5.39E-07 6.268427057 -0.171771762 S(ph)ASADNLTLPR ddPTM_A459_MK2206_30min_R2 2 SASADNLTLPR 11 0 Q8ND76-3;Q8ND76-2;Q8ND76 Q8ND76-3 CCNY Cyclin-Y 1 S(0.791)AS(0.209)ADNLTLPR;S(0.652)AS(0.348)ADNLTLPR 96.756 0.019916 35947800 62000 62069 47963 60689 56661 57772 64632 48036 56431 68970 TRUE FALSE 66746.76767 58986.74372 49562.06248 55730.51457 54436.20444 59970.55394 56145.74076 54314.47013 61339.26638 66719.51455 1.000408473 0.884100313 0.742842073 0.835295564 0.815896291 0.898845778 0.841519024 0.814071722 0.919360202 1 16.02582117 -8.537030118 4.326631215 0.999851967 0.85093912 0.341460459 0.06355673 0.201729692 12.95338667 0.063020936 0.016465372 2.90E-09 8.537030118 -0.148912848 S(ph)ASAPTLAETEKETAEHLDLAGASSR ddPTM_A459_MK2206_30min_R2 1 SASAPTLAETEKETAEHLDLAGASSR 26 1 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.485)AS(0.485)APT(0.03)LAETEKETAEHLDLAGASSR 71.002 0.00030921 9249500 26780 28018 21679 31223 21665 21328 34229 32964 23197 30106 TRUE FALSE 28830.29739 26626.66686 22401.76704 28671.98102 20814.32324 22139.65199 29734.69118 37272.50798 25214.63313 29123.64369 0.989927555 0.914262898 0.769195204 0.984491547 0.714688157 0.760195126 1.020981149 1.279802362 0.865778795 1 14.82990324 -7.417293719 6.088568693 1.072397501 0.854659067 0.330398028 0.128740767 0.246227596 12.01752625 0.053924977 0.03588422 3.83E-08 7.417293719 -0.217738434 S(ph)ASAPTLAETEKETAEHLDLAGASSRPK ddPTM_A459_MK2206_30min_R1 2 SASAPTLAETEKETAEHLDLAGASSRPK 28 2 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.712)AS(0.188)APT(0.088)LAET(0.009)EKET(0.003)AEHLDLAGASSRPK;S(0.382)AS(0.382)APT(0.141)LAET(0.048)EKET(0.048)AEHLDLAGASSRPK 60.363 0.0016739 13244300 4539.6 4476 3898.6 3981.5 3814.6 3895.6 3633.7 3836.7 2965.74 2806.9 TRUE FALSE 4153.483182 4184.611586 3633.973894 4288.15582 3662.656404 4116.165505 3391.302503 3803.156136 3274.039286 3154.639963 1.316626693 1.326494191 1.151945685 1.359317028 1.161037851 1.304797236 1.07502046 1.205575337 1.037848796 1 11.62325965 -7.797022401 0.468075705 0.988994261 1.301037568 0.606785012 0.077147778 0.620681599 0.33506488 0.077206039 0.055592015 1.60E-08 7.797022401 0.312043308 S(ph)ASAPTLAETEKETAEHLDLAGASSRPK ddPTM_A459_MK2206_30min_R2 2 SASAPTLAETEKETAEHLDLAGASSRPK 28 2 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.717)AS(0.147)APT(0.116)LAET(0.017)EKET(0.004)AEHLDLAGASSRPK;S(0.406)AS(0.406)APT(0.163)LAET(0.014)EKET(0.01)AEHLDLAGASSRPK 59.359 0.0020134 18159000 31881 53378 39969 49172 45463 44039 66513 50035 52944 45116 TRUE FALSE 34321.83387 50727.32614 41301.54651 45154.49031 43677.89419 45714.935 57779.7632 56574.7463 57548.97342 43643.86861 0.786406773 1.162301321 0.946331016 1.034612461 1.000779619 1.047453777 1.323891878 1.296281656 1.318603855 1 15.41349137 -7.149360556 4.68577335 1.258497337 0.998955372 0.470704257 0.123565047 0.18438752 6.370061682 0.045325994 0.034732345 7.09E-08 7.149360556 -0.259541965 S(ph)ASASHQADIK ddPTM_A459_MK2206_30min_R1 1 SASASHQADIK 11 0 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(0.487)AS(0.487)AS(0.026)HQADIK 149.82 0.00062438 6263000 2184.9 1702.2 1517 1330.5 2241 1582.6 2177.9 1749 443.74 1484.1 TRUE FALSE 1999.062782 1591.386471 1414.030267 1432.975341 2151.736225 1672.205444 2032.616265 1733.708677 489.8683609 1667.961512 1.19850654 0.954090642 0.847759529 0.859117749 1.290039493 1.002544382 1.218623002 1.039417675 0.293692844 1 10.70387028 -8.150339703 11.78491931 0.647163694 1.047195622 0.369431166 0.211308703 0.557290191 55.28864798 0.137386889 0.05189323 7.07E-09 8.150339703 0.400031928 S(ph)ASASHQADIK ddPTM_A459_MK2206_30min_R2 1 SASASHQADIK 11 0 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(0.578)AS(0.421)ASHQADIK 133.04 0.0018966 19749000 35778 15089 18060 22057 14528 23481 37392 17837 22064 23170 TRUE FALSE 38517.19119 14339.7022 18662.11139 20254.87254 13957.55772 24374.58591 32482.38548 20168.35714 23983.08684 22413.9648 1.718446136 0.639766428 0.832610899 0.903672007 0.622717036 1.087473195 1.44920302 0.899812118 1.070006447 1 14.45211025 -6.971202329 24.98276205 1.120968327 0.911893809 0.054077183 0.314393874 530.1066784 459880.5677 0.108847349 0.095992968 1.07E-07 6.971202329 -0.209074518 S(ph)ASASPLTPCSVTR ddPTM_A459_MK2206_30min_R2 1 SASASPLTPCSVTR 14 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 S(0.988)AS(0.012)ASPLTPCSVTR 135.94 0.00059922 19852000 14354 16409 14562 12406 17016 12738 19533 13738 12520 14095 TRUE FALSE 15452.95328 15594.15292 15047.48981 11392.39012 16347.86634 13222.75352 16968.29364 15533.60377 13608.96697 13635.0813 1.133323149 1.143678763 1.103586365 0.835520512 1.198956279 0.969759785 1.244458559 1.139238074 0.998084769 1 13.73503568 S(ph)ASDSGCDPASK ddPTM_A459_MK2206_30min_R1 4 SASDSGCDPASK 12 0 Q7LBC6;H0Y9V5 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 S(0.977)AS(0.014)DS(0.008)GCDPASK;S(0.981)AS(0.012)DS(0.007)GCDPASK;S(0.995)AS(0.003)DS(0.001)GCDPASK;S(0.972)AS(0.022)DS(0.006)GCDPASK 190.34 0.00010412 37241700 26363.4 27892.9 22126.9 17726.1 14399.1 11347.3 15617.7 15736.6 5626.7 15268.9 TRUE FALSE 24121.05439 26077.06714 20624.98768 19091.36729 13825.55336 11989.77432 14575.87173 15599.01657 6211.6156 17160.52661 1.405612715 1.519595974 1.201885475 1.112516401 0.805660203 0.698683356 0.849383709 0.909005704 0.361971153 1 14.06680621 -5.866110506 1.281608166 0.753545915 1.474814864 0.736163436 0.166654292 0.227173096 0.752383674 0.057425704 0.126469033 1.36E-06 5.866110506 0.721268948 S(ph)ASDSGCDPASK ddPTM_A459_MK2206_30min_R2 2 SASDSGCDPASK 12 0 Q7LBC6;H0Y9V5 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 S(0.97)AS(0.021)DS(0.01)GCDPASK;S(0.994)AS(0.003)DS(0.003)GCDPASK 144.51 0.00073684 47281600 115019 115588 98080 87837 67830 53412 75725 55163 48711 58901 TRUE FALSE 123824.9431 109848.068 101349.9382 80660.43612 65166.65338 55444.63109 65782.21654 62372.9935 52947.79473 56979.06519 2.173165577 1.92786715 1.778722376 1.415615294 1.143694674 0.973070213 1.154497995 1.09466509 0.929249972 1 15.79814433 -5.728598313 1.075721456 1.027122273 2.159576043 0.972019368 0.070699903 0.091462648 0.200234402 0.027271633 0.08220122 1.87E-06 5.728598313 1.13245377 up S(ph)ASDSGCDPASKK ddPTM_A459_MK2206_30min_R1 1 SASDSGCDPASKK 13 1 Q7LBC6;H0Y9V5 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 S(0.996)AS(0.004)DSGCDPASKK 123.95 0.0042285 3745500 2445.5 2161.2 1629 1484.1 814.28 928.96 1096.9 1195.5 224.61 598.96 TRUE FALSE 2237.497383 2020.505487 1518.428019 1598.405639 781.8455033 981.5569124 1023.727802 1185.04787 247.9590133 673.1636867 3.323853362 3.001506954 2.255659431 2.374468009 1.161449316 1.458125166 1.520770984 1.760415621 0.368348766 1 9.394813543 -4.377881399 0.361364004 0.947702423 6.154569759 0.819681429 0.370000252 3.478820941 0.290035699 0.333589822 8.356563364 4.19E-05 4.377881399 5.206867335 up S(ph)ASDSGCDPASKK ddPTM_A459_MK2206_30min_R2 1 SASDSGCDPASKK 13 1 Q7LBC6;H0Y9V5 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 S(0.962)AS(0.036)DS(0.002)GCDPASKK 88.092 0.043562 5737700 69558 86787 66044 62833 56035 39935 50996 36574 37107 43886 TRUE FALSE 74883.41396 82477.28378 68245.874 57699.34291 53834.78435 41454.75441 44300.16394 41354.34738 40334.49979 42454.00341 1.763871671 1.942744551 1.607525051 1.359102517 1.268073209 0.976462785 1.043486135 0.974097707 0.950075294 1 15.37361299 -5.941506086 0.9577527 0.97504547 1.909766437 0.957027561 0.072263614 0.10858278 0.198693191 0.029830229 0.070992268 1.14E-06 5.941506086 0.934720967 S(ph)ASFNTDPYVR ddPTM_A459_MK2206_30min_R1 1 SASFNTDPYVR 11 0 Q9UKV8-2;Q9UKV8 Q9UKV8-2 AGO2 Protein argonaute-2 1 S(0.583)AS(0.391)FNT(0.026)DPYVR 116.98 0.0047438 0 2772.9 2682.8 2793.2 2646.4 3069 2284.2 2906.1 2633.2 2530.1 2090.9 TRUE FALSE 2537.050294 2508.149232 2603.605366 2850.226187 2946.755231 2413.52943 2712.239371 2610.17821 2793.112949 2349.936477 1.079625053 1.067326396 1.107947126 1.212894993 1.253972292 1.027061562 1.154175612 1.110744156 1.18859083 1 11.19840604 -10.61860887 4.912430181 0.999995175 1.133562829 0.26715755 0.066378403 3.65E-06 6.72E-07 0.066886792 0.016221844 2.41E-11 10.61860887 0.133567655 S(ph)ASFNTDPYVR ddPTM_A459_MK2206_30min_R2 1 SASFNTDPYVR 11 0 Q9UKV8-2;Q9UKV8 Q9UKV8-2 AGO2 Protein argonaute-2 1 S(0.734)AS(0.266)FNTDPYVR 154.23 0.00054657 4594500 29954 40571 34684 38523 36740 36628 40610 34129 39364 36814 TRUE FALSE 32247.30127 38556.30314 35840.34725 35375.54767 35297.403 38021.90421 35277.85822 38589.77748 42787.80957 35612.76219 0.905498459 1.082654104 1.006390548 0.993339059 0.99114477 1.067648277 0.990595956 1.083594057 1.201474048 1 15.12010672 -7.886498978 4.995814768 1.113338141 1.009989743 0.285365521 0.064258574 0.232469273 9.077320861 0.03430597 0.015911724 1.30E-08 7.886498978 -0.103348397 S(ph)ASITNLSLDR ddPTM_A459_MK2206_30min_R1 1 SASITNLSLDR 11 0 Q9Y2I7;E9PDH4;Q9Y2I7-2;Q9Y2I7-3;Q9Y2I7-4 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 S(0.398)AS(0.119)IT(0.398)NLS(0.084)LDR 116.9 0.0047698 0 1936 2002.9 2154.7 1657.4 2920.5 2322.2 2643.4 1855.7 2407.8 2107.4 TRUE FALSE 1771.333034 1872.510846 2008.444967 1785.053235 2804.170301 2453.680957 2467.063609 1839.475811 2658.099426 2368.480622 0.74787736 0.790595806 0.847988769 0.753670188 1.183953238 1.03597257 1.041622881 0.776648031 1.12228042 1 11.20974615 -6.238474551 24.88942833 1.016783755 0.789927186 0.57186263 0.102206464 606.890681 657751.9973 0.030617345 0.039498892 5.77E-07 6.238474551 -0.226856569 S(ph)ASLSHPGGEGEPAR ddPTM_A459_MK2206_30min_R2 1 SASLSHPGGEGEPAR 15 0 C9JXU1;A6NN40;Q2M3G4-2;Q2M3G4 C9JXU1 SHROOM1 Protein Shroom1 1 S(0.867)AS(0.103)LS(0.03)HPGGEGEPAR 168.67 3.62E-06 0 7784.9 10035 8301.6 7763.2 7265.5 8690.9 7600.9 7156.2 7381.7 4862.2 TRUE FALSE 8380.91793 9536.676492 8578.371201 7128.921727 6980.219964 9021.63829 6602.8927 8091.539911 8023.746923 4703.546812 1.781829386 2.027550033 1.823809041 1.515648087 1.484033272 1.918050069 1.403811414 1.720306023 1.70589286 1 12.19953335 -12.07049065 0.18844719 2.98E-20 1.875370931 0.593910896 0.179941602 35.06295442 0.789961114 15.66856418 0.583816861 8.50E-13 12.07049065 1.875370931 S(ph)ASLSNLHSLDR ddPTM_A459_MK2206_30min_R2 1 SASLSNLHSLDR 12 0 B0QY53;B0QY54;A0A087WUW0;Q9Y3M2 B0QY53 CBY1 Protein chibby homolog 1 1 S(0.699)AS(0.298)LS(0.003)NLHSLDR 86.539 0.019679 3594800 24739 31011 24320 30563 25800 36233 31677 31394 27908 27601 TRUE FALSE 26633.03686 29471.03883 25130.81666 28065.90513 24786.96237 37611.8722 27517.77185 35497.30359 30335.38739 26700.38163 0.99747776 1.10376845 0.941215635 1.051142471 0.928337381 1.408664218 1.030613428 1.329468023 1.136140592 1 14.70457274 -6.728301132 24.99982473 1.19217173 1.008997306 0.334157288 0.124048744 203.3153358 153382.667 0.037665637 0.037663342 1.87E-07 6.728301132 -0.183174424 S(ph)ASNKSPLVLEANR ddPTM_A459_MK2206_30min_R2 2 SASNKSPLVLEANR 14 1 Q92560;F8W6N3 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 S(0.976)AS(0.024)NKSPLVLEANR;S(0.499)AS(0.499)NKS(0.003)PLVLEANR 64.313 0.041398 32946200 61828 66680 67451 75905 66479 54883 83009 61199 47579 79203 TRUE FALSE 66561.59922 63368.76816 69699.78267 69703.31869 63868.70043 56971.61102 72109.81859 69197.91943 51717.33542 76618.6126 0.868739291 0.827067549 0.909697792 0.909743942 0.833592495 0.743574036 0.941152758 0.903147644 0.674997023 1 16.22540728 -4.360412495 18.43412126 0.857812805 11.69992505 7.98E-05 0.090890533 3239.096156 367448.3289 0.021086895 303.0845634 4.36E-05 4.360412495 10.84211225 S(ph)ASPDDDLGSSNWEAADLGNEER ddPTM_A459_MK2206_30min_R1 1 SASPDDDLGSSNWEAADLGNEER 23 0 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 S(0.5)AS(0.5)PDDDLGSSNWEAADLGNEER 161.91 5.06E-10 4495100 597.09 359.53 508.82 498.43 606.43 558.34 677.03 395.72 446.45 417.11 TRUE FALSE 546.3043601 336.1245317 474.2827161 536.819165 582.274609 589.9527283 631.866564 392.2602618 492.8600751 468.7847358 1.165362944 0.717012535 1.011728155 1.145129361 1.242093789 1.258472564 1.347882121 0.836759885 1.051356918 1 8.872781784 -4.453984789 23.30467464 1.075169048 4.802280554 0.023467879 0.183327052 4110.765044 1422873.638 0.047839548 18650.6901 3.52E-05 4.453984789 3.727111506 S(ph)ASPDDDLGSSNWEAADLGNEER ddPTM_A459_MK2206_30min_R2 1 SASPDDDLGSSNWEAADLGNEER 23 0 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 S(0.5)AS(0.5)PDDDLGSSNWEAADLGNEER 151.28 4.16E-08 12109000 11294 16272 13508 18513 14527 13248 16384 11809 12740 12667 TRUE FALSE 12158.67732 15463.95614 13958.34998 17000.42868 13956.59699 13752.16192 14232.76112 13352.47685 13848.10217 12253.67683 0.992247265 1.261984983 1.139115237 1.387373677 1.138972178 1.122288609 1.161509424 1.089671046 1.130118116 1 13.58092709 -8.413719619 0.612546321 1.004183793 1.190092173 0.219045306 0.097152387 1.175957542 1.048828765 0.097851824 0.043335939 3.86E-09 8.413719619 0.18590838 S(ph)ASPEVSEGHENQHGQESEAK ddPTM_A459_MK2206_30min_R1 1 SASPEVSEGHENQHGQESEAK 21 0 O60930 O60930 RNASEH1 Ribonuclease H1 1 S(0.499)AS(0.499)PEVS(0.002)EGHENQHGQESEAK 92.426 0.00030776 4100500 1802.8 1592.6 1658.2 1151.5 2011.5 2003.8 1655.1 1709.3 1071.5 1184 TRUE FALSE 1649.462393 1488.921451 1545.646004 1240.18873 1931.377696 2117.253424 1544.691299 1694.35577 1182.886259 1330.682859 1.239560863 1.11891533 1.161543484 0.931994217 1.451418483 1.591102952 1.160826029 1.273297961 0.888931763 1 10.37795106 -8.258785916 24.73469944 0.94446586 1.240059288 0.321401924 0.172394925 247.3089079 2305398.773 0.140295812 0.047477474 5.51E-09 8.258785916 0.295593428 S(ph)ASPEVSEGHENQHGQESEAK ddPTM_A459_MK2206_30min_R2 1 SASPEVSEGHENQHGQESEAK 21 0 O60930 O60930 RNASEH1 Ribonuclease H1 1 S(0.948)AS(0.051)PEVSEGHENQHGQESEAK 97.623 0.00018416 6897100 11961 20995 15638 28836 28177 24608 26927 17289 21924 21310 TRUE FALSE 12876.74336 19952.41883 16159.36311 26480.00656 27070.6294 25544.47468 23391.45255 19548.73166 23830.90989 20614.65645 0.624640211 0.967875399 0.783877391 1.284523302 1.313173929 1.239141421 1.134700092 0.948292867 1.156017805 1 14.3313828 -5.751509272 24.99999629 1.160952358 0.809705322 0.607770165 0.132790062 148.2638096 373264.7772 0.037970696 0.064778823 1.77E-06 5.751509272 -0.351247036 S(ph)ASPHDVDLCLVSPCEFEHR ddPTM_A459_MK2206_30min_R1 5 SASPHDVDLCLVSPCEFEHR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 S(0.5)AS(0.5)PHDVDLCLVSPCEFEHR;S(0.5)AS(0.5)PHDVDLCLVSPCEFEHR;S(0.601)AS(0.399)PHDVDLCLVSPCEFEHR;S(0.5)AS(0.5)PHDVDLCLVSPCEFEHR;S(0.5)AS(0.5)PHDVDLCLVSPCEFEHR 215.59 3.11E-18 51247200 10412.6 9627.41 10317.43 7820.17 11228.89 11570.79 12873.8 9501.13 9152.26 10181.03 TRUE FALSE 9526.953691 9000.663859 9617.111598 8422.480848 10781.61953 12225.91813 12015.01229 9418.062622 10103.67018 11442.33286 0.832605886 0.78661091 0.840485215 0.736080741 0.942257114 1.068481251 1.050049185 0.823089377 0.883007889 1 13.4820936 -6.356641883 6.334243997 0.963601172 0.801484119 0.543489156 0.072946288 0.210398596 11.70640885 0.024984092 0.028368591 4.40E-07 6.356641883 -0.162117053 S(ph)ASPHDVDLCLVSPCEFEHR ddPTM_A459_MK2206_30min_R2 5 SASPHDVDLCLVSPCEFEHR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 S(0.5)AS(0.5)PHDVDLCLVSPCEFEHR;S(0.5)AS(0.5)PHDVDLCLVSPCEFEHR;S(0.5)AS(0.5)PHDVDLCLVSPCEFEHR;S(0.855)AS(0.145)PHDVDLCLVSPCEFEHR;S(0.5)AS(0.5)PHDVDLCLVSPCEFEHR 181.23 1.40E-13 98819300 102779.4 127615 109000 147748.6 118290.1 128316.5 145287.4 113217.7 113602.7 131789.6 TRUE FALSE 110648.2699 121277.8247 112634.0056 135677.0668 113645.4363 133199.6743 126210.9899 128015.6421 123483.6575 127489.3161 0.867902294 0.951278337 0.883477996 1.064223033 0.891411451 1.044790876 0.989973071 1.004128393 0.968580437 1 16.96001683 -4.3675169 0.589038012 0.996477267 0.733803813 0.348590504 0.051841174 6.371224804 1.179151572 0.024231987 1.266018541 4.29E-05 4.3675169 -0.262673454 S(ph)ASPHDVDLCLVSPCEFEHRK ddPTM_A459_MK2206_30min_R1 1 SASPHDVDLCLVSPCEFEHRK 21 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 S(0.5)AS(0.5)PHDVDLCLVSPCEFEHRK 84.829 0.00078843 1550700 1637.8 1776.9 1740.2 1294.9 2059.7 1489.8 1385.6 1771.3 1034.4 1015.3 TRUE FALSE 1498.49651 1661.223487 1622.080072 1394.633422 1977.657788 1574.151189 1293.169152 1755.813711 1141.929582 1141.083029 1.313223027 1.455830509 1.42152677 1.222201529 1.733141005 1.379523793 1.133282258 1.538725637 1.000741885 1 10.15618806 -8.274577736 24.54384497 1.000370775 1.397928979 0.510569562 0.156375322 557.2486324 1040986.174 0.144956495 0.038382364 5.31E-09 8.274577736 0.397558204 S(ph)ASPHDVDLCLVSPCEFEHRK ddPTM_A459_MK2206_30min_R2 1 SASPHDVDLCLVSPCEFEHRK 21 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 S(0.5)AS(0.5)PHDVDLCLVSPCEFEHRK 87.287 0.00066463 3332000 6403.8 8642.5 8372.3 12235 10147 10109 9439.7 5205.8 11002 7651.4 TRUE FALSE 6894.079852 8213.326017 8651.428303 11235.36136 9748.577795 10493.70508 8200.256051 5886.215934 11958.93407 7401.735445 0.931413978 1.109648687 1.168837818 1.51793609 1.3170665 1.417735767 1.107882889 0.795248084 1.61569326 1 12.85364786 -10.73345831 13.74423216 1.000046511 1.217022785 0.069264113 0.241869843 0 0 0.23621107 0.057289599 1.85E-11 10.73345831 0.216976274 S(ph)ASPSSQGWQGR ddPTM_A459_MK2206_30min_R1 1 SASPSSQGWQGR 12 0 Q5VV67-2;Q5VV67;X6R7H2 Q5VV67-2 PPRC1 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 1 S(0.761)AS(0.238)PS(0.001)SQGWQGR 107.39 0.0085025 7005100 1127.9 1277.5 1301.4 1350.1 1330.3 1349 1321.7 1682.2 1051.7 1026 TRUE FALSE 1031.966182 1194.334518 1213.064594 1454.084936 1277.311334 1425.379214 1233.531805 1667.492703 1161.027979 1153.108626 0.89494273 1.035751959 1.051995074 1.261012972 1.107711195 1.236118768 1.069744668 1.446084667 1.006867829 1 10.17131271 -5.045918609 1.298581333 1.176072672 0.855714855 0.276390784 0.129327746 1.019323007 2.10417826 0.036754032 0.383427824 9.00E-06 5.045918609 -0.320357817 S(ph)ASPSSQGWQGR ddPTM_A459_MK2206_30min_R2 2 SASPSSQGWQGR 12 0 Q5VV67-2;Q5VV67;X6R7H2 Q5VV67-2 PPRC1 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 1 S(0.97)AS(0.021)PS(0.008)SQGWQGR;S(0.957)AS(0.042)PS(0.001)SQGWQGR 169.58 0.00034175 20281900 32135 39669 26750 36997 39314 37807 39723 28588 36890 33787 TRUE FALSE 34595.28031 37699.09514 27641.83165 33974.22675 37770.33482 39245.77188 34507.32238 32324.54976 40098.62552 32684.53296 1.058460292 1.153423094 0.845715975 1.039458841 1.155602709 1.20074446 1.055769175 0.98898613 1.226837953 1 14.99632046 -4.435587053 21.04264043 1.073463977 0.02713236 0.001814305 0.108966142 3299.098539 1361443.053 0.026786368 117358.7397 3.67E-05 4.435587053 -1.046331617 S(ph)ASPYHGFTIVNR ddPTM_A459_MK2206_30min_R2 1 SASPYHGFTIVNR 13 0 Q9NPI6-2;Q9NPI6;A0A087WT55;A0A087WXD0;A0A087WVE6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 S(0.678)AS(0.32)PY(0.002)HGFTIVNR 67.846 0.045425 4266400 24750 30836 26508 30689 34209 29530 34300 26101 32255 27016 TRUE FALSE 26644.87903 29304.72908 27391.76349 28181.61053 32865.78277 30653.78484 29796.3688 29512.49032 35060.4816 26134.47013 1.019530103 1.121305652 1.048108622 1.078331047 1.257564535 1.172925439 1.140117578 1.129255354 1.341541704 1 14.67366629 -6.12790393 8.013654647 1.178187306 1.067978047 0.269018984 0.086142912 0.374660578 22.63072065 0.02417431 0.031290689 7.45E-07 6.12790393 -0.110209259 S(ph)ASTDLGTADVVLGR ddPTM_A459_MK2206_30min_R1 1 SASTDLGTADVVLGR 15 0 A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5;H7C0E9;Q9Y2K5-2;Q9Y2K5-3 A0A0U1RRA6;Q9Y2K5-3 R3HDM2 R3H domain-containing protein 2 1 S(0.673)AS(0.175)T(0.152)DLGTADVVLGR 211.13 1.03E-06 7017400 2231.6 1997 1776.4 1740.5 1718.5 1627.2 2106.7 1667.3 1640.6 1680.5 TRUE FALSE 2041.790701 1866.994937 1655.822917 1874.553612 1650.048506 1719.330658 1966.165887 1652.722972 1811.146241 1888.693027 1.081060115 0.988511585 0.876703039 0.992513651 0.873645681 0.910328271 1.041019297 0.875061722 0.958941562 1 10.88317252 -4.87087778 3.472899221 0.938084685 1.086167749 0.369833998 0.055436164 0.25724691 5.23243807 0.013375132 0.087091573 1.35E-05 4.87087778 0.148083064 S(ph)ASTLCLPSVGAAR ddPTM_A459_MK2206_30min_R2 2 SASTLCLPSVGAAR 14 0 Q8IUC4-2;Q8IUC4;A8MT19 Q8IUC4-2 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 S(0.956)AS(0.038)T(0.006)LCLPSVGAAR;S(0.496)AS(0.252)T(0.252)LCLPSVGAAR 250.05 1.85E-27 90569000 160286 134709 110517 144727 142366 124371 128005 107082 86209 110359 TRUE FALSE 172557.6194 128019.5469 114201.5816 132902.3411 136775.9955 129104.0256 111197.7897 121077.9851 93707.30299 106757.9949 1.616343765 1.199156533 1.069723928 1.244893568 1.281178011 1.209314822 1.04158747 1.134135061 0.877754431 1 16.70398459 S(ph)ATASPQQPQAQQR ddPTM_A459_MK2206_30min_R2 2 SATASPQQPQAQQR 14 0 Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-5;Q9BX66-12;A0A0U1RQI5 Q9BX66-4 SORBS1 Sorbin and SH3 domain-containing protein 1 1 S(0.676)AT(0.201)AS(0.122)PQQPQAQQR;S(0.907)AT(0.037)AS(0.056)PQQPQAQQR 225.21 1.15E-09 6474100 8705.6 10576.1 10334.3 13556.8 9911.1 11844 11976.2 9341 12171.9 11892.3 TRUE FALSE 9372.107429 10050.90625 10678.8404 12449.16607 9521.940415 12294.73172 10403.71055 10561.90077 13230.58986 11504.25522 0.814664422 0.873668574 0.928251347 1.082135769 0.827688558 1.068711662 0.904335861 0.918086444 1.15006053 1 13.48987997 -5.244730962 2.372505545 0.982926488 0.826008987 0.299240808 0.090275825 0.405630899 4.28141926 0.023771093 0.084792007 5.69E-06 5.244730962 -0.156917501 S(ph)ATFPNAGPR ddPTM_A459_MK2206_30min_R1 1 SATFPNAGPR 10 0 Q86X27;Q86X27-3 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 S(0.662)AT(0.338)FPNAGPR 169.21 0.00024231 49569000 1707.5 1508.5 1458.6 1393.4 1615.7 1415.4 1674 1524.3 1348.1 1297.4 TRUE FALSE 1562.268159 1410.296376 1359.594296 1500.719909 1551.343248 1495.538725 1562.330514 1510.973206 1488.239819 1458.131707 1.071417727 0.967194094 0.932422146 1.029207377 1.063925323 1.025654073 1.071460491 1.036239181 1.020648418 1 10.50990532 -5.97617765 24.91509085 1.040012233 0.986827097 0.226264978 0.03775988 281.0174216 293905.8064 0.010563495 0.015667173 1.06E-06 5.97617765 -0.053185135 S(ph)ATFPNAGPR ddPTM_A459_MK2206_30min_R2 1 SATFPNAGPR 10 0 Q86X27;Q86X27-3 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 S(0.92)AT(0.08)FPNAGPR 147.62 0.00081756 26976000 49628 43703 39772 35554 44770 35438 32539 37257 47991 40760 TRUE FALSE 53427.55784 41532.77257 41097.97863 32649.12447 43012.10485 36786.61792 28266.59021 42126.61782 52165.17043 39430.00454 1.354997507 1.053329135 1.042302153 0.828027408 1.090847068 0.932960023 0.716880217 1.06838988 1.322981598 1 15.26700626 -4.636327847 2.038940642 0.987308062 1.572871379 0.320601496 0.153156772 1.483672141 4.84373867 0.042249434 1.855969407 2.31E-05 4.636327847 0.585563317 S(ph)ATPEPVTDNR ddPTM_A459_MK2206_30min_R2 1 SATPEPVTDNR 11 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.761)AT(0.239)PEPVTDNR 103.43 0.013295 11609000 43691 29727 26947 31232 29412 20655 29434 20639 15079 25997 TRUE FALSE 47036.01655 28250.80041 27845.39953 28680.24569 28257.1371 21441.0405 25569.28044 23336.58816 16390.54416 25148.72002 1.870314534 1.123349434 1.107229295 1.140425663 1.123601403 0.852569852 1.016722936 0.927943376 0.651744667 1 14.61819735 -1.587541443 0.803548613 0.943529025 200 0.794557163 0.136083353 207.3492913 0.798452264 0.050090555 75029.99753 0.025849882 1.587541443 199.056471 S(ph)ATPVNCEQPDILVSSTPINEGQTVLDK ddPTM_A459_MK2206_30min_R1 1 SATPVNCEQPDILVSSTPINEGQTVLDK 28 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 S(0.536)AT(0.464)PVNCEQPDILVSSTPINEGQTVLDK 133.85 1.72E-12 14776000 1840.8 2219.8 1938.4 1367.8 1459.5 1654.9 1614.6 1548.1 1786.5 1466.8 TRUE FALSE 1684.230294 2075.290617 1806.826809 1473.148193 1401.365024 1748.599008 1506.89298 1534.565125 1972.213068 1648.518258 1.021663112 1.258882397 1.096030814 0.89361958 0.850075526 1.060709519 0.914089348 0.93087542 1.196355005 1 10.68695415 -5.588457973 6.342194743 0.971251402 1.149320429 0.290466194 0.106536138 0.217390669 15.96529694 0.028588459 0.050188897 2.58E-06 5.588457973 0.178069028 S(ph)ATPVNCEQPDILVSSTPINEGQTVLDK ddPTM_A459_MK2206_30min_R2 1 SATPVNCEQPDILVSSTPINEGQTVLDK 28 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 S(0.5)AT(0.5)PVNCEQPDILVSSTPINEGQTVLDK 121.04 2.62E-12 15803000 34335 40785 34594 32857 34417 32473 38271 35212 32205 35605 TRUE FALSE 36963.714 38759.67621 35747.34669 30172.478 33065.61565 33708.78277 33245.97173 39814.3293 35006.13269 34443.21177 1.07317849 1.125321195 1.037863337 0.876006518 0.960003843 0.978677105 0.965240174 1.155941251 1.01634345 1 15.07193206 -10.80678063 14.75896737 0.999999189 1.019552338 0.006072514 0.078601757 0 0 0.083289745 0.02020073 1.56E-11 10.80678063 0.019553149 S(ph)AVDLSCSR ddPTM_A459_MK2206_30min_R1 2 SAVDLSCSR 9 0 Q9Y446;Q9Y446-2;E9PK71;E9PQ15 Q9Y446 PKP3 Plakophilin-3 1 S(1)AVDLSCSR;S(1)AVDLSCSR 120.86 0.0064469 18887500 7299.8 9840.3 9242.9 8241.4 7350.7 5767.3 7641.6 6330 7575.8 7341.3 TRUE FALSE 6678.913677 9199.694681 8615.5177 8876.154056 7057.906054 6093.839542 7131.842807 6274.657477 8363.33152 8250.795668 0.809487224 1.11500697 1.044204468 1.075793707 0.855421263 0.738575986 0.86438243 0.760491197 1.013639394 1 13.01031754 -6.274790284 23.11878938 0.853048988 1.020906319 0.257668498 0.112382102 322.4914388 558433.414 0.033635317 0.038413124 5.31E-07 6.274790284 0.167857331 S(ph)AVDLSCSR ddPTM_A459_MK2206_30min_R2 2 SAVDLSCSR 9 0 Q9Y446;Q9Y446-2;E9PK71;E9PQ15 Q9Y446 PKP3 Plakophilin-3 1 S(1)AVDLSCSR;S(0.993)AVDLSCS(0.007)R 158.08 0.00086805 44034000 40313 71189 57774 65303 58339 66928 57162 66808 62991 48163 TRUE FALSE 43399.39428 67653.85778 59700.15632 59967.53601 56048.31773 69474.99194 49656.56074 75540.03499 68469.84332 46591.44525 0.931488475 1.452066091 1.281354463 1.287093278 1.202974439 1.491153399 1.065787087 1.621328434 1.469579725 1 15.50777746 -4.750388668 24.84146914 1.33011568 0.931487544 0.280264692 0.185553131 567.6884639 1276047.037 0.043887822 0.645993116 1.78E-05 4.750388668 -0.398628135 S(ph)AVEAQNEVTENPK ddPTM_A459_MK2206_30min_R2 1 SAVEAQNEVTENPK 14 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 S(1)AVEAQNEVTENPK 257.46 1.24E-35 3681000 11724 15866 14064 11816 14081 10550 13471 11837 13268 12910 TRUE FALSE 12621.59845 15078.11751 14532.88674 10850.595 13528.10919 10951.48764 11702.24152 13384.13654 14422.02666 12488.74776 1.010637632 1.20733622 1.163678459 0.868829703 1.083223831 0.876908386 0.93702281 1.071695642 1.154801661 1 13.60834121 -5.729075566 24.97960736 0.99776227 1.135229423 0.26792768 0.096895131 250.7726249 193553.9051 0.0266727 0.046193987 1.87E-06 5.729075566 0.137467152 S(ph)AVEQLCLAESTRPR ddPTM_A459_MK2206_30min_R2 1 SAVEQLCLAESTRPR 15 1 A0JP02;B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;H0YGJ6 A0JP02 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 S(1)AVEQLCLAESTRPR 121.42 0.003458 0 3145.4 4261.3 2945.8 4299.9 4572.6 5306.9 4709.4 3904.3 3922 3742.9 TRUE FALSE 3386.214242 4049.690039 3044.011502 3948.584415 4393.056749 5508.857798 4091.050123 4414.605415 4263.128471 3620.76948 0.935219506 1.118461162 0.840708451 1.090537367 1.213293686 1.521460515 1.129884171 1.219245092 1.177409524 1 11.82208061 -6.092915849 3.650114554 1.231775685 0.978152309 0.376758282 0.1390703 0.241806136 5.974402768 0.041727369 0.056659829 8.07E-07 6.092915849 -0.253623376 S(ph)AVFPGEGK ddPTM_A459_MK2206_30min_R1 4 SAVFPGEGK 9 0 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)AVFPGEGK;S(1)AVFPGEGK;S(1)AVFPGEGK;S(1)AVFPGEGK 121.29 0.0063098 102274000 19895.9 19710.4 18770.8 17405.2 17526 15511.7 17391.2 17490.1 17303.1 15327.3 TRUE FALSE 18203.64923 18427.24938 17496.69039 18745.75152 16827.90231 16389.95905 16231.06478 17337.1859 19101.81916 17226.16164 1.056744364 1.06972463 1.015704529 1.088214073 0.976880553 0.951457405 0.942233396 1.006445096 1.10888424 1 14.07231365 -6.270981271 24.94397214 0.992891897 1.055470854 0.286591159 0.045919685 884.843527 2313111.587 0.015039175 0.017296992 5.36E-07 6.270981271 0.062578957 S(ph)AVFPGEGK ddPTM_A459_MK2206_30min_R2 3 SAVFPGEGK 9 0 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)AVFPGEGK;S(1)AVFPGEGK;S(1)AVFPGEGK 89.9 0.029256 97461100 499632 565033 508102 519479 561356 400120 592971 397102 373080 455510 TRUE FALSE 537884.2101 536974.2829 525041.8671 477035.904 539314.3429 415346.847 515113.1954 449004.5949 405529.824 440646.746 1.220669879 1.218604898 1.191525574 1.082581247 1.22391541 0.942584623 1.168993531 1.018967232 0.920305954 1 18.74926303 -6.560126308 0.447381469 0.968114615 1.254439024 0.553251988 0.076514297 1.017662786 0.409993338 0.070028986 0.125664557 2.75E-07 6.560126308 0.286324409 S(ph)AVLLVDETATTPIFANR ddPTM_A459_MK2206_30min_R1 3 SAVLLVDETATTPIFANR 18 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73 Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR 272.24 3.67E-54 186957000 9169.9 9280.3 9734.3 7394.97 9086.1 8384.7 9860.2 8268.8 8480 8663.3 TRUE FALSE 8389.951852 8676.150783 9073.562837 7964.531871 8724.181397 8859.434468 9202.444049 8196.506753 9361.526346 9736.575009 0.861694368 0.891088578 0.93190499 0.818001388 0.896021588 0.909912825 0.945141802 0.841826489 0.961480432 1 13.24919866 -9.35865519 0.388275539 1.018046817 0.879272998 0.442684265 0.039698992 3.638260321 0.831884437 0.142560388 0.029635534 4.38E-10 9.35865519 -0.138773819 S(ph)AVLLVDETATTPIFANR ddPTM_A459_MK2206_30min_R2 7 SAVLLVDETATTPIFANR 18 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73 Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR 218.83 2.74E-14 97451760 81993.8 94403.9 82533.48 91546.4 89661.2 97630.71 87787.3 71490.9 72755.7 84038.2 TRUE FALSE 88271.30837 89715.9396 85285.10503 84066.76628 86140.65078 101346.1151 76260.72206 80835.00609 79083.85927 81296.04042 1.085800833 1.10357084 1.049068375 1.034081929 1.059592206 1.246630396 0.938061948 0.994328945 0.972788575 1 16.31089747 S(ph)AVLLVDETATTPIFANRR ddPTM_A459_MK2206_30min_R1 2 SAVLLVDETATTPIFANRR 19 1 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73 Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(1)AVLLVDETATTPIFANRR;S(1)AVLLVDETATTPIFANRR 154.56 3.35E-06 35597000 2192.94 2735.4 2788.4 2564.8 2888.2 1995.84 2094.01 2794.6 1773.53 1430.22 TRUE FALSE 2006.418937 2557.324963 2599.131177 2762.34134 2773.156878 2108.842736 1954.322414 2770.167107 1957.89479 1607.406451 1.248233722 1.590963481 1.616971971 1.718508308 1.725236872 1.311953635 1.215823423 1.723376875 1.218045871 1 10.65051906 -6.7778471 24.98798283 1.334174908 1.590343713 0.306510186 0.210596518 343.7934805 523573.6718 0.073992666 0.065439933 1.67E-07 6.7778471 0.256168805 S(ph)AVSGAILLVVPNVMGMMCLS(ph)PPLDK ddPTM_A459_MK2206_30min_R1 1 SAVSGAILLVVPNVMGMMCLSPPLDK 26 0 A0A087X004;Q9UI32 A0A087X004 GLS2 "Glutaminase liver isoform, mitochondrial" 2 S(0.5)AVS(0.5)GAILLVVPNVMGMMCLS(1)PPLDK 50.851 0.0086506 5358800 311.48 562.9 177.89 250.81 330.44 327.95 375.09 332.38 245.98 223.01 TRUE FALSE 284.9869904 526.2551077 165.8153224 270.1274297 317.2778751 346.5182456 350.0684305 329.4740367 271.5505012 250.6381624 1.137045483 2.099660732 0.661572527 1.077758578 1.265880152 1.382543832 1.396708415 1.314540585 1.083436371 1 7.969462287 -14.52287875 0.132166867 0.087103247 1.387299638 0.059641237 0.341982339 486.4883776 4.016587333 117.9897038 2.515389854 3.00E-15 14.52287875 1.300196391 S(ph)CETSSQDLGFSYYPAENLIEYK ddPTM_A459_MK2206_30min_R1 2 SCETSSQDLGFSYYPAENLIEYK 23 0 S5FZ81;Q8WUB8-2;Q8WUB8;Q8WUB8-3 S5FZ81 PHF10 PHD finger protein 10 1 S(0.997)CET(0.003)SSQDLGFSYYPAENLIEYK;S(0.938)CET(0.061)S(0.001)SQDLGFSYYPAENLIEYK 203.3 2.34E-23 8251100 3296 3397.9 3554.1 2699.6 2803.1 2755.2 3595.5 3269 3740.6 3726.9 TRUE FALSE 3015.657892 3176.696092 3312.857594 2907.52366 2691.446591 2911.197043 3355.650755 3240.419478 4129.448756 4188.616509 0.719965145 0.758411778 0.79091929 0.694148928 0.642562189 0.69502592 0.801135828 0.773625246 0.985874154 1 12.03225809 -8.191673238 1.808715972 1.013315354 0.723697331 0.839933929 0.045363234 0.141793425 0.837161219 0.045749244 0.013849703 6.43E-09 8.191673238 -0.289618023 S(ph)CHDLSVL ddPTM_A459_MK2206_30min_R1 3 SCHDLSVL 8 0 P55042;Q8IYK8;P55040 P55042;P55040 RRAD;REM2;GEM GTP-binding protein RAD;GTP-binding protein REM 2;GTP-binding protein GEM 1 S(0.999)CHDLS(0.001)VL;S(1)CHDLSVL;S(0.985)CHDLS(0.015)VL 93.374 0.024152 5739400 8568 8661.6 8709.4 7859.5 8919.9 8571.8 9354.9 9048.1 7897.1 8254.5 TRUE FALSE 7839.246608 8097.728266 8118.230194 8464.840052 8564.601495 9057.127908 8730.85169 8968.993416 8718.031805 9277.129778 0.845007755 0.87287 0.875079943 0.912441698 0.92319518 0.976285567 0.941115614 0.966785378 0.939733734 1 13.17946281 -1.817526912 0.206198893 0.996746763 0.283939386 0.878661849 0.016429758 14.7261746 0.201670142 0.029199697 3.337920664 0.015222048 1.817526912 -0.712807377 S(ph)CHDLSVL ddPTM_A459_MK2206_30min_R2 1 SCHDLSVL 8 0 P55042;Q8IYK8;P55040 P55042;P55040 RRAD;REM2;GEM GTP-binding protein RAD;GTP-binding protein REM 2;GTP-binding protein GEM 1 S(0.994)CHDLS(0.006)VL 90.709 0.027887 1579500 12827 19413 17279 19146 19053 18899 15685 13353 16684 16868 TRUE FALSE 13809.04498 18448.97865 17855.07324 17581.71055 18304.88349 19618.21469 13625.54066 15098.28295 18135.14416 16317.59854 0.846266989 1.130618492 1.094221873 1.077469243 1.121787832 1.202273401 0.835021197 0.925276039 1.111385607 1 13.99414113 -7.259122201 24.99996395 0.961693718 1.083727765 0.20175948 0.107463723 326.5979319 3523681.161 0.042491785 0.031290397 5.51E-08 7.259122201 0.122034047 S(ph)CLVEGDAK ddPTM_A459_MK2206_30min_R2 1 SCLVEGDAK 9 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 S(1)CLVEGDAK 91.469 0.031698 0 47965 44431 43601 45161 47094 32222 54238 32461 29613 47516 TRUE FALSE 51637.23728 42224.62115 45054.63558 41471.20184 45244.85293 33448.23079 47116.48545 36703.76416 32188.68521 45965.55681 1.123389791 0.918614373 0.980182526 0.902223419 0.984320784 0.727680313 1.025038936 0.79850581 0.70027837 1 15.4882656 -1.522878746 0.44296991 0.853622335 6.011344341 0.303612781 0.107758494 106.1573955 1.298721093 0.06671961 492.9697642 0.03 1.522878746 5.157722006 S(ph)CLWLR ddPTM_A459_MK2206_30min_R2 1 SCLWLR 6 0 Q99956 Q99956 DUSP9 Dual specificity protein phosphatase 9 1 S(1)CLWLR 94.662 0.045647 0 27487 38422 28108 35825 31271 22105 23319 21955 21151 26116 TRUE FALSE 29591.42585 36514.01935 29045.10669 32897.9829 30043.14342 22946.22126 20257.18729 24824.59388 22990.67575 25263.83706 1.171295785 1.445307744 1.149671233 1.302176816 1.189175791 0.908263508 0.801825441 0.982613758 0.910023117 1 14.62478615 -6.68636411 3.837122986 0.910375113 1.268754764 0.772369461 0.090424836 0.099732716 2.874538871 0.030204727 0.029507096 2.06E-07 6.68636411 0.358379651 S(ph)CPELTSGPR ddPTM_A459_MK2206_30min_R1 2 SCPELTSGPR 10 0 Q13111;Q13111-3;Q13111-2 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 S(1)CPELTSGPR;S(1)CPELTSGPR 201.09 0.00020622 32869000 1753.48 1747.83 1932.89 1548.33 1888.41 1449.94 1807.15 1562.45 1656.25 1142.69 TRUE FALSE 1604.337318 1634.045949 1801.690812 1667.582645 1813.190631 1532.03435 1686.598321 1548.789664 1828.423114 1284.255064 1.249235734 1.272368702 1.402907306 1.298482437 1.411861772 1.192936195 1.313289212 1.205982914 1.423722721 1 10.32671605 -11.1985381 3.018260902 0.967864013 1.306182045 0.580206373 0.078549539 11726376.87 15129366.29 2965316.913 0.018659129 6.33E-12 11.1985381 0.338318031 S(ph)CPELTSGPR ddPTM_A459_MK2206_30min_R2 4 SCPELTSGPR 10 0 Q13111;Q13111-3;Q13111-2 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 S(1)CPELTSGPR;S(1)CPELTSGPR;S(1)CPELTSGPR;S(1)CPELTSGPR 177.57 7.96E-05 102685000 52288.9 46172.2 56134.6 56163.4 60050 65374.9 51550.6 34321.5 55070.2 48246 TRUE FALSE 56292.17839 43879.35569 58006.09955 51574.67056 57692.13527 67862.78763 44781.9443 38807.43789 59860.10645 46671.73697 1.20612992 0.940169759 1.242852812 1.105051449 1.236125737 1.454044611 0.959508842 0.831497613 1.282577216 1 15.51026154 S(ph)CPETLTHAVGMSESPIGPK ddPTM_A459_MK2206_30min_R2 1 SCPETLTHAVGMSESPIGPK 20 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 S(0.994)CPET(0.001)LT(0.005)HAVGMSESPIGPK 84.948 0.0016452 5850700 12669 22056 20869 19364 28006 21617 24370 15260 17922 16360 TRUE FALSE 13638.94838 20960.73111 21564.76204 17781.89926 26906.34372 22439.65008 21170.18973 17254.5344 19480.82316 15826.17454 0.861796914 1.324434471 1.36260105 1.123575329 1.700116706 1.417882131 1.337669421 1.090253008 1.230924322 1 13.95002495 -7.759299314 24.96432642 1.12044147 1.319724544 0.15482397 0.207921116 106.5023133 1242424.229 0.105514085 0.057028026 1.74E-08 7.759299314 0.199283074 S(ph)CSEEKIPEDGSLNTTK ddPTM_A459_MK2206_30min_R1 1 SCSEEKIPEDGSLNTTK 17 1 P37173;P37173-2 P37173 TGFBR2 TGF-beta receptor type-2 1 S(0.553)CS(0.447)EEKIPEDGSLNTTK 61.165 0.031483 7324100 1046.3 1595.7 1493 1207.7 1456.3 1003.9 1375 1107.4 1473.3 1405.6 TRUE FALSE 957.3066907 1491.81964 1391.65932 1300.717263 1398.292487 1060.73995 1283.276259 1097.718119 1626.454807 1579.73634 0.605991435 0.944347232 0.880944044 0.823376174 0.885142952 0.671466449 0.812335721 0.694874259 1.029573585 1 10.62546808 -8.276883289 24.81660606 1.014786866 0.799101579 0.4432692 0.100421563 796.5718388 1279986.545 0.093634844 0.024533612 5.29E-09 8.276883289 -0.215685287 S(ph)CSVTDAVAEQGHLPPPSAPAGR ddPTM_A459_MK2206_30min_R1 2 SCSVTDAVAEQGHLPPPSAPAGR 23 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 S(0.547)CS(0.421)VT(0.032)DAVAEQGHLPPPSAPAGR;S(0.49)CS(0.49)VT(0.021)DAVAEQGHLPPPSAPAGR 148.15 7.41E-08 26084000 2159.4 2017.23 2116.32 1508.22 2854.4 2439.6 3121.8 2856.5 2173.9 2502.5 TRUE FALSE 1975.731691 1885.90796 1972.670095 1624.383366 2740.703204 2577.728044 2913.550418 2831.525922 2399.884684 2812.528593 0.702475237 0.670538236 0.701386681 0.577552658 0.974462343 0.916516209 1.035918506 1.006754537 0.853283657 1 11.45765205 -6.270976009 24.99639034 0.965999765 0.666270239 0.86732711 0.05776137 223.9545767 587004.6339 0.017678092 0.020304234 5.36E-07 6.270976009 -0.299729526 S(ph)CSVTDAVAEQGHLPPPSAPAGR ddPTM_A459_MK2206_30min_R2 2 SCSVTDAVAEQGHLPPPSAPAGR 23 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 S(0.548)CS(0.439)VT(0.013)DAVAEQGHLPPPSAPAGR;S(0.49)CS(0.49)VT(0.02)DAVAEQGHLPPPSAPAGR 186.44 2.96E-22 36003000 82245 111419 106874 114779 101784 116528 112279 89430 115512 106419 TRUE FALSE 88541.74044 105886.0945 110437.1258 105401.1885 97787.44874 120962.5547 97536.63243 101118.8081 125559.025 102946.5567 0.860074812 1.028554017 1.072761725 1.023843748 0.94988557 1.175003405 0.947449196 0.982245655 1.219652497 1 16.65153605 -4.763806922 4.849963717 1.043042841 0.847723425 0.295808531 0.085572369 0.227707199 13.37264466 0.020493723 0.152634315 1.72E-05 4.763806922 -0.195319416 S(ph)CSVTDAVAEQGHLPPPSVAYVHTTPGLPSGWEER ddPTM_A459_MK2206_30min_R2 1 SCSVTDAVAEQGHLPPPSVAYVHTTPGLPSGWEER 35 0 Q96PU5-9;Q96PU5-6;Q96PU5-5 Q96PU5-9 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 S(0.332)CS(0.332)VT(0.332)DAVAEQGHLPPPS(0.004)VAY(0.001)VHTTPGLPSGWEER 47.749 0.0073871 4560200 6669.2 10412 10024 14127 12449 18175 13583 7889.5 14210 11090 TRUE FALSE 7179.79908 9894.95522 10358.19516 12972.77891 11960.18971 18866.66236 11799.53578 8920.684739 15445.96011 10728.13421 0.669249558 0.922337009 0.965516925 1.209229737 1.114843409 1.758615431 1.099868398 0.831522478 1.439762014 1 13.38911157 -5.226306822 1.232286337 1.219153307 0.651090338 0.338535849 0.241076939 0.923033527 1.995372453 0.078966354 0.547333319 5.94E-06 5.226306822 -0.568062969 S(ph)CT(ph)QVAGCLVS(ph)LSMLST(ph)R ddPTM_A459_MK2206_30min_R2 1 SCTQVAGCLVSLSMLSTR 18 0 Q9NUT2-5;Q9NUT2-4;Q9NUT2-3;Q9NUT2-2;Q9NUT2;C9JYI3;C9JTY4 Q9NUT2-5 ABCB8 "ATP-binding cassette sub-family B member 8, mitochondrial" 4 S(1)CT(1)QVAGCLVS(0.76)LS(0.38)MLS(0.276)T(0.584)R 66.308 0.018527 7743400 22653 20529 17941 24434 17762 18763 23953 17650 17825 23819 TRUE FALSE 24387.3311 19509.55971 18539.14399 22437.66404 17064.57463 19477.03911 20807.94233 19956.9156 19375.38628 23041.78798 1.058395777 0.846703378 0.804587908 0.973781377 0.740592468 0.845292003 0.903052417 0.866118359 0.84088033 1 14.49196505 -4.758652096 24.99225011 0.862389031 1.058396041 0.379286395 0.072241818 75.16176766 673812.0585 0.016877338 0.113415591 1.74E-05 4.758652096 0.19600701 S(ph)CTPSPDQISHR ddPTM_A459_MK2206_30min_R1 1 SCTPSPDQISHR 12 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.486)CT(0.479)PS(0.035)PDQISHR 162.7 0.00032674 27437000 1895.7 1769 1326.2 1417.4 1784.6 2002.4 2271.5 1632.9 1487.7 1503.8 TRUE FALSE 1734.46076 1653.837778 1236.181239 1526.568394 1713.515603 2115.774158 2119.97238 1618.623727 1642.351739 1690.102097 1.026246144 0.97854312 0.731424002 0.90324034 1.013853309 1.251861743 1.254345748 0.957707662 0.971747057 1 10.72289469 -6.438740864 4.272241868 1.09829424 0.903998301 0.320540573 0.12023331 0.280250559 9.254198195 0.042217941 0.047356243 3.64E-07 6.438740864 -0.194295939 S(ph)CTPSPDQISHR ddPTM_A459_MK2206_30min_R2 1 SCTPSPDQISHR 12 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.399)CT(0.325)PS(0.276)PDQISHR 71.98 0.038772 11992000 24166 26646 29095 30218 34619 29882 32810 31341 32372 35846 TRUE FALSE 26016.16754 25322.79839 30065.01278 27749.09274 33259.68411 31019.18045 28502.00759 35437.37631 35187.65804 34676.34796 0.750256849 0.730261399 0.867017854 0.800231119 0.959146106 0.894534237 0.821943753 1.021946612 1.014745212 1 15.08166434 -4.939646489 0.2642747 1.028097835 0.506191918 0.696346071 0.05726037 4.971776322 0.313711995 0.081202832 0.844148119 1.15E-05 4.939646489 -0.521905917 S(ph)DASDMNSDTSPSCR ddPTM_A459_MK2206_30min_R1 1 SDASDMNSDTSPSCR 15 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(1)DASDMNSDTSPSCR 115.66 0.002348 4735100 1012.2 1248.8 1156.2 874.6 981.2 741.69 1184.4 1192.5 464.95 783.87 TRUE FALSE 926.1070747 1167.502893 1077.720365 941.9618435 942.1167263 783.6838468 1105.390837 1182.074098 513.2832163 880.9817335 1.051221654 1.325229399 1.223317493 1.069218359 1.069394166 0.88955743 1.254726171 1.341769135 0.582626401 1 9.782968296 -7.013147401 0.342086874 0.943084605 1.228365604 0.129450391 0.202455252 4.047047353 1.088403993 0.255406963 0.421037201 9.70E-08 7.013147401 0.285280999 S(ph)DASDMNSDTSPSCR ddPTM_A459_MK2206_30min_R2 1 SDASDMNSDTSPSCR 15 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(1)DASDMNSDTSPSCR 167.92 6.96E-05 2811200 5244.8 7445.3 6650.2 5716.2 6696.4 6399.5 5770.8 5177.1 7003.6 5843.3 TRUE FALSE 5646.345921 7075.577228 6871.914349 5249.168175 6433.465689 6643.037457 5013.087028 5853.764746 7612.760468 5652.6336 0.998887655 1.251731092 1.215701359 0.928623461 1.138135981 1.175211048 0.886858654 1.035581847 1.346763475 1 12.46470747 S(ph)DDELLDDFFHDQSTATSQAGTLSSIPTALTR ddPTM_A459_MK2206_30min_R1 1 SDDELLDDFFHDQSTATSQAGTLSSIPTALTR 32 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 S(1)DDELLDDFFHDQSTATSQAGTLSSIPTALTR 103.89 5.48E-10 3424100 173.08 423.68 420.74 267.15 283.62 211.79 440.05 358.95 419.85 361.37 TRUE FALSE 158.3586371 396.098355 392.181341 287.7259393 272.3228148 223.7813668 410.6950674 355.811738 463.4949099 406.1392438 0.389912178 0.975277226 0.965632716 0.708441609 0.670515886 0.55099666 1.011217393 0.876083125 1.14122168 1 8.665830626 -7.288473921 23.74512896 0.996804247 0.731918008 0.407130642 0.174217142 481.8272228 423198.2433 0.074943237 0.050546423 5.15E-08 7.288473921 -0.26488624 S(ph)DDELLDDFFHDQSTATSQAGTLSSIPTALTR ddPTM_A459_MK2206_30min_R2 1 SDDELLDDFFHDQSTATSQAGTLSSIPTALTR 32 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 S(0.986)DDELLDDFFHDQS(0.006)T(0.006)AT(0.002)S(0.001)QAGTLSSIPTALTR 46.162 0.013348 2421000 628.23 2281.6 543.02 2712.3 2341.3 1133.5 1093.9 2357.3 2487.7 849.24 TRUE FALSE 676.3277718 2168.299062 561.1240158 2490.696414 2249.368798 1176.636137 950.269616 2665.407204 2704.075649 821.5293683 0.823254527 2.639344551 0.683023684 3.031780128 2.738026034 1.432250851 1.156708028 3.244445429 3.291514282 1 9.68216834 -4.447559957 1.03662131 2.215749759 1.94E-32 0.105083025 0.964138453 8.887584719 4.889589579 0.313132882 25.69857419 3.57E-05 4.447559957 -2.215749759 S(ph)DDTLDEEDSFVMK ddPTM_A459_MK2206_30min_R1 2 SDDTLDEEDSFVMK 14 0 P53355-4;P53355;P53355-3 P53355-4 DAPK1 Death-associated protein kinase 1 1 S(0.996)DDT(0.004)LDEEDSFVMK;S(0.983)DDT(0.017)LDEEDSFVMK 232.17 1.76E-13 4832700 1805.15 1515.36 1465.97 1081.94 1515.16 1139.97 1668.77 1726.63 2012.63 2048.8 TRUE FALSE 1651.612513 1416.709789 1366.464041 1165.271206 1454.807969 1204.514116 1557.449398 1711.534256 2221.850091 2302.620812 0.717275074 0.615259699 0.593438587 0.506063005 0.631805272 0.523105719 0.676381187 0.743298353 0.964922266 1 11.16906114 -8.092131849 1.66838099 1.007974428 0.597171481 0.869753511 0.057621984 0.124038993 0.616400533 0.052737208 0.016737625 8.09E-09 8.092131849 -0.410802947 S(ph)DDTLDEEDSFVMK ddPTM_A459_MK2206_30min_R2 1 SDDTLDEEDSFVMK 14 0 P53355-4;P53355;P53355-3 P53355-4 DAPK1 Death-associated protein kinase 1 1 S(0.976)DDT(0.024)LDEEDSFVMK 105.19 0.0094936 0 2055.1 4638.7 2567.4 3852.3 2776.7 3737.8 2915.7 3303.2 3057.3 3180.4 TRUE FALSE 2212.440036 4408.348903 2652.995835 3537.554767 2667.672806 3880.044598 2532.865088 3734.939582 3323.218428 3076.623808 0.719112954 1.432852756 0.862307516 1.149817133 0.867077996 1.261137155 0.823261226 1.213973438 1.080151047 1 11.58713233 S(ph)DEEDEDSDFGEEQR ddPTM_A459_MK2206_30min_R2 1 SDEEDEDSDFGEEQR 15 0 Q5VW52;Q9HCL2 Q5VW52 GPAM "Glycerol-3-phosphate acyltransferase 1, mitochondrial" 1 S(0.945)DEEDEDS(0.055)DFGEEQR 230.69 6.52E-14 1965100 8116.3 8358.6 11028 10013 8357.5 9149.4 9536.4 6988.4 10243 9199.8 TRUE FALSE 8737.690168 7943.524079 11395.66802 9194.90587 8029.342557 9497.586828 8284.259225 7901.807875 11133.91762 8899.611279 0.981805822 0.89256978 1.280468063 1.033180617 0.902212726 1.067191199 0.9308563 0.887882361 1.251056622 1 13.11952661 -3.326413002 15.082989 1.018786586 0.353830775 0 0.134567853 0 0 0.030216739 0 0.000471614 3.326413002 -0.66495581 S(ph)DGAPASDSKPGSSEAAPSSK ddPTM_A459_MK2206_30min_R1 2 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 S(1)DGAPASDSKPGSSEAAPSSK;S(0.998)DGAPASDSKPGS(0.001)SEAAPSSK 140.4 1.08E-05 51562000 4427.6 4892.6 3705 3217.7 3338.5 3737.3 4908.9 4192.1 7068.1 7776.2 TRUE FALSE 4051.00937 4574.090851 3453.514923 3465.527812 3205.520476 3948.902696 4581.436238 4155.448912 7802.854288 8739.574363 0.46352479 0.523376844 0.395158251 0.396532791 0.366782219 0.451841535 0.524217319 0.475474976 0.89281857 1 13.0933473 -8.309886451 2.865141372 1.001516231 0.443185216 0.942788917 0.049318736 0.059441292 0.908558617 0.051058278 0.014250456 4.90E-09 8.309886451 -0.558331015 down S(ph)DGAPASDSKPGSSEAAPSSK ddPTM_A459_MK2206_30min_R2 1 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 S(0.985)DGAPAS(0.013)DS(0.002)KPGSSEAAPSSK 84.68 0.00063683 12170000 25407 17579 23500 15666 17474 15384 24512 17368 15121 31264 TRUE FALSE 27352.17945 16706.05242 24283.47827 14386.03769 16787.88296 15969.4489 21293.54496 19638.05723 16436.19725 30243.85824 0.9043879 0.552378347 0.802922632 0.47566807 0.555084038 0.528022872 0.70406179 0.649323809 0.543455703 1 14.88435458 -10.72587644 4.734487038 1.000062378 0.629805207 0.421177683 0.128223486 8.15E-05 1.37E-05 0.119810517 0.029053437 1.88E-11 10.72587644 -0.370257171 S(ph)DISPLTPR ddPTM_A459_MK2206_30min_R1 1 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(1)DISPLTPR 128.81 0.0042342 11095000 2143.3 1775.1 1869.9 1371.4 1910.3 1364.7 2009.8 1605.9 2213.2 2904.9 TRUE FALSE 1961.00108 1659.540667 1742.976398 1477.025466 1834.208706 1441.968135 1875.729909 1591.859786 2443.27006 3264.780943 0.600653188 0.508316085 0.533872388 0.452411813 0.561816777 0.441673778 0.574534691 0.487585481 0.748371821 1 11.67277048 -8.529513934 2.651522855 0.999211022 0.518041873 0.903308205 0.04970996 0.06838117 1.16098529 0.044467435 0.012001358 2.95E-09 8.529513934 -0.48116915 S(ph)DISPLTPR ddPTM_A459_MK2206_30min_R2 4 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.995)DIS(0.005)PLTPR;S(0.99)DIS(0.01)PLTPR;S(0.999)DIS(0.001)PLTPR;S(1)DISPLTPR 146.11 0.0017804 46631000 208270 143924 147567 153932 140534 133068 164767 146616 115520 213564 TRUE FALSE 224215.3113 136776.9434 152486.8101 141355.2632 135015.929 138131.996 143132.895 165779.2146 125567.7208 206595.4242 1.085286919 0.662052144 0.738093841 0.684212943 0.653528168 0.668611111 0.692817353 0.802434107 0.607795266 1 17.65644878 -10.38593701 19.16201217 0.999999999 0.726066005 0.279659319 0.128266175 0 0 0.118822602 0.028818714 4.11E-11 10.38593701 -0.273933994 S(ph)DKSPDLAPTPAPQSTPR ddPTM_A459_MK2206_30min_R1 2 SDKSPDLAPTPAPQSTPR 18 1 F8WAE5;Q9BY44-4;Q9BY44-3;Q9BY44;Q9BY44-2 F8WAE5 EIF2A "Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed" 1 S(0.925)DKS(0.075)PDLAPTPAPQSTPR;S(0.969)DKS(0.02)PDLAPT(0.01)PAPQSTPR 207.16 8.70E-11 594530000 12438.6 16004.9 15385.3 13688.5 11291.1 10018.9 11294.8 12244.5 13036.3 12151.6 TRUE FALSE 11380.63175 14962.9781 14340.9887 14742.79064 10841.35158 10586.16146 10541.3445 12137.44763 14391.47004 13657.03195 0.833316624 1.095624449 1.050080922 1.079501805 0.793829261 0.77514364 0.771862037 0.888732462 1.053777284 1 13.73735636 -6.258374006 24.89827987 0.864288609 1.022948342 0.253499366 0.110250418 321.7259073 2613193.349 0.034035741 0.042118603 5.52E-07 6.258374006 0.158659733 S(ph)DKSPDLAPTPAPQSTPR ddPTM_A459_MK2206_30min_R2 2 SDKSPDLAPTPAPQSTPR 18 1 F8WAE5;Q9BY44-4;Q9BY44-3;Q9BY44;Q9BY44-2 F8WAE5 EIF2A "Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed" 1 S(0.966)DKS(0.034)PDLAPTPAPQSTPR;S(0.945)DKS(0.055)PDLAPTPAPQSTPR 242.94 1.30E-24 240150000 127856 139949 124907 115911 126549 92682 151029 117328 96831 127016 TRUE FALSE 137644.7537 132999.3362 129071.337 106440.7005 121580.0504 96209.07846 131198.7109 132663.1724 105253.1853 122871.4783 1.120233561 1.082426434 1.050458079 0.866276714 0.989489604 0.783005786 1.067771892 1.079690537 0.856612021 1 16.90679054 -5.572553814 6.93935348 0.95201635 1.093095487 0.335250004 0.089051868 0.235690614 25.80869369 0.02456374 0.043076499 2.68E-06 5.572553814 0.141079138 S(ph)DLEEDNER ddPTM_A459_MK2206_30min_R2 2 SDLEEDNER 9 0 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 S(1)DLEEDNER;S(1)DLEEDNER 134.38 0.0028962 8216700 19991.7 9717.2 11182.5 13201.1 9963.1 8758.6 11443.9 10759.6 8196.7 12077.8 TRUE FALSE 21522.27992 9234.657978 11555.31897 12122.5279 9571.898633 9091.91466 9941.302183 12165.91666 8909.63415 11683.70238 1.842077043 0.790387985 0.989011753 1.037558773 0.819252179 0.778170683 0.850869174 1.041272387 0.762569421 1 13.51220989 -4.75747805 24.99999966 0.897606593 1.842078406 0.878395785 0.105539361 37.06607972 233892.1325 0.026261437 0.194325424 1.75E-05 4.75747805 0.944471813 S(ph)DPIMLLKDRMVNS(ph)NLASVEELK ddPTM_A459_MK2206_30min_R2 2 SDPIMLLKDRMVNSNLASVEELK 23 2 P08559-3;P08559;P08559-2;P08559-4;Q5JPU3 P08559-3 PDHA1 "Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial" 2 S(1)DPIMLLKDRMVNS(0.882)NLAS(0.118)VEELK;S(1)DPIMLLKDRMVNS(0.871)NLAS(0.129)VEELK 72.231 0.011284 0 24576 41782 31262 33499 43413 40338 31847 25456 36544 31399 TRUE FALSE 26457.55746 39707.16664 32304.25948 30762.02454 41708.38749 41873.09086 27665.45064 28783.1866 39722.53106 30374.4532 0.871046378 1.307255356 1.063533861 1.01275978 1.373140356 1.378562787 0.910813125 0.947611679 1.30776119 1 14.89057082 -10.62527242 4.664704524 0.999991375 1.132680308 0.041623585 0.187216162 1.69E-05 3.26E-06 0.182933049 0.044364898 2.37E-11 10.62527242 0.132688933 S(ph)DSAPPTPVNR ddPTM_A459_MK2206_30min_R2 1 SDSAPPTPVNR 11 0 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 S(0.975)DS(0.025)APPTPVNR 158.08 0.0005686 5885700 33837 39171 31740 37722 36926 38056 37955 27353 38418 33335 TRUE FALSE 36427.58674 37225.8251 32798.19576 34639.99193 35476.0997 39504.24775 32971.46291 30928.13102 41759.5282 32247.28168 1.129632789 1.154386452 1.017084047 1.07419882 1.100126828 1.225041172 1.022457125 0.959092655 1.294978244 1 14.97688993 -10.92804412 3.53267873 0.999193722 1.102452397 0.10184721 0.095169752 68054640.41 47947531.51 497034.9844 0.023199326 1.18E-11 10.92804412 0.103258675 S(ph)DSASSEPVGIYQGFEK ddPTM_A459_MK2206_30min_R2 1 SDSASSEPVGIYQGFEK 17 0 Q05655;Q05655-2 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit 1 S(0.984)DS(0.015)ASSEPVGIYQGFEK 191.41 4.02E-15 0 7124.3 8201.4 8626.1 8847.7 5095.8 8357.3 7091.6 4636.7 5488.3 9801.3 TRUE FALSE 7669.741886 7794.130402 8913.689869 8124.814608 4895.713288 8675.342908 6160.464401 5242.73261 5965.662413 9481.484384 0.808917842 0.822036939 0.940115441 0.856913778 0.516344603 0.914977292 0.649736281 0.552944286 0.629190765 1 13.21089722 -6.063861053 24.99453647 0.69456784 0.861023687 0.191675513 0.145073914 305.124288 119421.5741 0.041573086 0.053670679 8.63E-07 6.063861053 0.166455847 S(ph)DSDLLTCSPTEDATMGSR ddPTM_A459_MK2206_30min_R1 2 SDSDLLTCSPTEDATMGSR 19 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.997)DS(0.003)DLLTCSPTEDATMGSR;S(0.999)DS(0.001)DLLTCSPTEDATMGSR 230.48 1.12E-23 8423300 1272.25 1231.12 1366.28 871.3 1003.64 926.46 1527.96 1251.34 1446.41 1785.88 TRUE FALSE 1164.038457 1150.973864 1273.54072 938.407677 963.6628936 978.9153646 1426.032576 1240.399666 1596.769496 2007.128297 0.579952193 0.573443096 0.634508876 0.467537466 0.480120227 0.487719378 0.710484018 0.617997199 0.795549292 1 10.97091712 -8.4570169 0.928178127 0.999224042 0.543479716 0.82758256 0.065064326 0.239041307 0.456162133 0.065855835 0.022828445 3.49E-09 8.4570169 -0.455744326 S(ph)DSDLLTCSPTEDATMGSR ddPTM_A459_MK2206_30min_R2 2 SDSDLLTCSPTEDATMGSR 19 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.804)DS(0.193)DLLT(0.002)CS(0.001)PTEDATMGSR;S(0.997)DS(0.003)DLLTCSPTEDATMGSR 134.08 0.00021373 6975400 11140.4 10922.9 10183.3 11371.6 9234 11226.5 11425.1 10742.7 8741.8 14542.1 TRUE FALSE 11993.31759 10380.48467 10522.80614 10442.5039 8871.426763 11653.73232 9924.970646 12146.80778 9502.145962 14067.59247 0.852549405 0.737900582 0.748017556 0.742309242 0.630628644 0.828409861 0.7055202 0.863460312 0.675463551 1 13.78008783 -11.07088674 2.66162219 1.015459985 0.753206599 0.514833027 0.071696369 13177831.09 12763547.05 1454197.056 0.017278636 8.49E-12 11.07088674 -0.262253386 S(ph)DSDSSTLPR ddPTM_A459_MK2206_30min_R2 1 SDSDSSTLPR 10 0 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 S(0.919)DS(0.067)DS(0.01)S(0.002)T(0.001)LPR 89.9 0.030193 44872000 17689 29044 29850 37082 25602 40763 30186 28547 34991 26979 TRUE FALSE 19043.28344 27601.71719 30845.1841 34052.28198 24596.73684 42314.26453 26222.54194 32278.19092 38034.45393 26098.67744 0.729664692 1.057590648 1.181867709 1.304751249 0.942451467 1.621318346 1.004746007 1.236774967 1.457332618 1 14.67168908 -4.541069953 1.343271745 1.232670211 0.250113212 0.358779619 0.199524996 2.368964986 2.526867264 0.054836698 3.705346793 2.88E-05 4.541069953 -0.982556999 S(ph)DSEATISR ddPTM_A459_MK2206_30min_R1 2 SDSEATISR 9 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2;H0Y4T4 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.998)DS(0.002)EATISR;S(1)DSEATISR 154.15 0.00092491 92813000 4203.8 4249.3 3886.8 3597.7 4296.4 4328.5 4276.7 3817.3 3708.8 3828.1 TRUE FALSE 3846.244735 3972.669798 3622.974845 3874.795477 4125.26529 4573.575929 3991.409146 3783.925749 4094.343032 4302.353929 0.893986129 0.92337122 0.842091308 0.900622204 0.958839128 1.063040374 0.927726824 0.879501271 0.95165184 1 12.0709105 -6.22405478 4.91521308 0.960777361 0.887987695 0.358653087 0.048197578 0.262716106 16.05274885 0.015802789 0.020104224 5.97E-07 6.22405478 -0.072789665 S(ph)DSEATISR ddPTM_A459_MK2206_30min_R2 2 SDSEATISR 9 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2;H0Y4T4 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.965)DS(0.034)EAT(0.001)ISR;S(0.999)DS(0.001)EATISR 160.91 0.00091553 191455000 54259.2 73856 67730 79702 62532 62670 60920 54472 53997 55250 TRUE FALSE 58413.32607 70188.41844 69988.0844 73190.09165 60076.67948 65054.95076 52921.13082 61591.67743 58693.56146 53447.19702 1.092916548 1.313229175 1.309480914 1.369390646 1.124037982 1.217181712 0.990157272 1.152383677 1.098159767 1 15.70582667 -6.770074684 1.670007257 1.077222885 1.271089127 0.466295551 0.091424594 0.329770936 1.905118279 0.038836606 0.035138697 1.70E-07 6.770074684 0.193866242 S(ph)DSEDICLFTK ddPTM_A459_MK2206_30min_R1 1 SDSEDICLFTK 11 0 O76021;J3QSV6;I3L234;I3L3C4;I3L3U9 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 S(0.694)DS(0.306)EDICLFTK 114.87 0.0054374 0 927.04 911.33 943.79 733.05 679.26 618.28 897.44 750.18 843.35 807.14 TRUE FALSE 848.1903799 852.0022514 879.7281643 789.509638 652.2036358 653.2864793 837.5734151 743.6212554 931.0192505 907.1345968 0.935021531 0.939223633 0.96978791 0.87033351 0.718971185 0.720164881 0.923317684 0.819747431 1.026329779 1 9.825172817 -10.67325379 15.37550952 1 0.87441879 0.118676585 0.096643444 0 0 0.100469258 0.024367374 2.12E-11 10.67325379 -0.12558121 S(ph)DSELEVKPAESLLR ddPTM_A459_MK2206_30min_R2 3 SDSELEVKPAESLLR 15 1 Q92539 Q92539 LPIN2 Phosphatidate phosphatase LPIN2 1 S(0.975)DS(0.025)ELEVKPAESLLR;S(0.999)DS(0.001)ELEVKPAESLLR;S(0.999)DS(0.001)ELEVKPAESLLR 161.24 0.00057956 11752700 40914 48378 41416 40695 43375 37529 49218 37978 36666 49965 TRUE FALSE 44046.4073 45975.61887 42796.78877 37370.08832 41671.87956 38957.19239 42755.61748 42941.855 39855.1424 48334.64614 0.911280227 0.951193865 0.885426753 0.773153241 0.862153401 0.805988985 0.884574956 0.888428041 0.824566757 1 15.56077006 -10.66711706 17.97114608 1 0.865035821 0.400493818 0.049478792 0 0 0.051483596 0.012486606 2.15E-11 10.66711706 -0.134964179 S(ph)DSELEVR ddPTM_A459_MK2206_30min_R2 2 SDSELEVR 8 0 Q9BQK8;Q9BQK8-2 Q9BQK8 LPIN3 Phosphatidate phosphatase LPIN3 1 S(0.993)DS(0.007)ELEVR;S(0.997)DS(0.003)ELEVR 109.66 0.012354 57706000 257515 207948 248224 225910 202562 157231 198422 173449 157073 243175 TRUE FALSE 277230.5464 197621.6047 256499.6643 207452.4303 194608.3981 163214.5359 172368.9531 196119.3798 170734.9256 235240.2197 1.178499777 0.840084255 1.090373341 0.881874837 0.827275193 0.693820709 0.732735896 0.833698337 0.725789688 1 17.84377522 -6.038321621 2.61973651 0.784066155 1.017185592 0.447274708 0.113825877 0.245674515 3.360336925 0.033287857 0.048828999 9.16E-07 6.038321621 0.233119437 S(ph)DSELVSK ddPTM_A459_MK2206_30min_R2 2 SDSELVSK 8 0 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 S(0.992)DS(0.008)ELVSK;S(0.988)DS(0.012)ELVSK 105.4 0.014171 35963000 128192 78557 97505 88532 78534 62146 94657 82445 62181 111094 TRUE FALSE 138006.4781 74655.97361 100755.768 81298.6524 75450.36056 64511.00958 82228.4222 93220.84458 67589.39098 107469.0119 1.284151363 0.694674421 0.937533213 0.756484599 0.702066198 0.600275451 0.765136115 0.867420691 0.628919814 1 16.7135612 -4.756687733 24.9979121 0.765201478 1.284152149 0.610381222 0.12250992 95.16176414 500576.635 0.029549671 0.233898626 1.75E-05 4.756687733 0.518950671 S(ph)DSLLSFR ddPTM_A459_MK2206_30min_R1 3 SDSLLSFR 8 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.638)DS(0.362)LLSFR;S(0.99)DS(0.01)LLSFR;S(0.775)DS(0.224)LLS(0.001)FR 153.97 0.00078411 4865300 3113.66 2739.05 3044.04 3048.43 2927.42 3145.97 3402.44 3192.81 2891.87 2594.48 TRUE FALSE 2848.826867 2560.737347 2837.419046 3283.220607 2810.814662 3324.092103 3175.469436 3164.895599 3192.490235 2915.90377 0.976996188 0.878196796 0.973083912 1.125970151 0.963960022 1.139986901 1.089017226 1.085390962 1.094854456 1 11.50972739 -5.592050075 5.384377062 1.073512223 0.926822226 0.541644638 0.055144319 0.131353872 7.034208235 0.014341738 0.025489334 2.56E-06 5.592050075 -0.146689996 S(ph)DSLLSFR ddPTM_A459_MK2206_30min_R2 2 SDSLLSFR 8 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.555)DS(0.445)LLSFR;S(1)DSLLSFR 148.69 0.0015317 5459300 17895.8 19730 16486.4 20751.7 23406.8 20280.7 21997.9 16603.7 17411.4 21555.2 TRUE FALSE 19265.91621 18750.23689 17036.04835 19056.21973 22487.73142 21052.49625 19109.54931 18773.8606 18925.8121 20851.85559 0.92394253 0.89921191 0.817003948 0.91388604 1.078452291 1.009622197 0.916443586 0.900344841 0.907632034 1 14.34788815 -6.007144696 24.99540534 0.966192446 0.879214747 0.336055054 0.056694082 434.8943294 1521469.235 0.017946577 0.025450492 9.84E-07 6.007144696 -0.086977699 S(ph)DSPEIPFQAAAGPSDGLDASSPGNSFVGLR ddPTM_A459_MK2206_30min_R2 1 SDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 31 0 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.527)DS(0.473)PEIPFQAAAGPSDGLDASSPGNSFVGLR 73.128 4.99E-05 3613500 15772 17276 20295 18962 18190 18864 20586 16998 15317 20963 TRUE FALSE 16979.51645 16418.09896 20971.62517 17412.74394 17475.7692 19581.88274 17883.03347 19219.69696 16649.24497 20278.97903 0.837296415 0.809611714 1.034155869 0.858659794 0.861767704 0.965624685 0.88185078 0.947764527 0.82101002 1 14.3076974 S(ph)DSRAQAVSEDAGGNEGR ddPTM_A459_MK2206_30min_R2 1 SDSRAQAVSEDAGGNEGR 18 1 P55884;P55884-2;C9JZG1 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 S(0.632)DS(0.368)RAQAVSEDAGGNEGR 106.7 0.0077947 3673000 1502.7 6821.3 2879.2 5659.8 9548.5 8460.8 7347.4 5794.1 11696 3023.9 TRUE FALSE 1617.747867 6482.564161 2975.191091 5197.376235 9173.577913 8782.781673 6382.677554 6551.408764 12713.29694 2925.230391 0.553032634 2.216086699 1.017079236 1.776740817 3.136018941 3.002423912 2.181940122 2.239621462 4.34608398 1 11.51433454 -6.081538319 4.776372313 2.701409763 1.359546257 0.334295676 0.887450559 0.25333197 10.21548563 0.252260118 0.335152816 8.29E-07 6.081538319 -1.341863505 S(ph)DSSGGYNLSDIIQSPSSTGLLK ddPTM_A459_MK2206_30min_R1 2 SDSSGGYNLSDIIQSPSSTGLLK 23 0 E9PDR5;Q9P2D0-2;Q9P2D0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 S(0.502)DS(0.389)S(0.108)GGYNLSDIIQSPSSTGLLK;S(0.501)DS(0.39)S(0.109)GGYNLSDIIQSPSSTGLLK 133.91 4.19E-06 22181000 12019.9 11853.7 12303.8 10426.9 12566.7 10543.4 11121.6 11507.8 9509.3 7810.6 TRUE FALSE 10997.54439 11082.02198 11468.65234 11229.98164 12066.14173 11140.3582 10379.69836 11407.18852 10497.82576 8778.236095 1.25281939 1.262442916 1.306487113 1.279298201 1.374551971 1.269088468 1.182435542 1.299485272 1.195892392 1 13.09971536 -9.235548857 0.621228385 0.989156988 1.289186404 0.773822505 0.045598863 1.226949247 0.685657951 0.077064462 0.019221562 5.81E-10 9.235548857 0.300029416 S(ph)DSVSASER ddPTM_A459_MK2206_30min_R2 2 SDSVSASER 9 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 S(0.552)DS(0.437)VS(0.011)ASER;S(0.598)DS(0.383)VS(0.018)ASER 173.24 0.0004398 53856000 117069 131330 134432 143942 140924 128808 165615 155567 127691 166487 TRUE FALSE 126031.8927 124808.3432 138913.8958 132181.4782 135390.6157 133709.8787 143869.5516 175900.141 138797.3324 161054.5428 0.782541681 0.774944568 0.862527026 0.820724929 0.840650709 0.830214885 0.893297072 1.092177457 0.861803274 1 17.29718983 -7.528550573 5.610696069 0.985632169 0.822436568 0.62698154 0.057338773 0.101750494 11.26987486 0.025418759 0.015214762 2.96E-08 7.528550573 -0.163195601 S(ph)DSYSQSLK ddPTM_A459_MK2206_30min_R1 1 SDSYSQSLK 9 0 Q9H8W4 Q9H8W4 PLEKHF2 Pleckstrin homology domain-containing family F member 2 1 S(0.518)DS(0.463)YS(0.019)QSLK 112.13 0.0098747 11212000 1784 1800.5 1279.9 1432.9 2064.9 2335 3172.7 4211.6 4089.5 3650.4 TRUE FALSE 1632.261432 1683.287123 1193.023954 1543.262206 1982.650661 2467.205682 2961.054972 4174.778425 4514.618159 4102.639111 0.39785645 0.410293735 0.290794272 0.376163285 0.483262263 0.60137039 0.721743954 1.017583636 1.100418057 1 12.00233654 -7.358759465 1.099073936 1.081584339 0.369914273 0.963044212 0.05504374 0.089319504 0.205939786 0.041844139 0.021937449 4.38E-08 7.358759465 -0.711670066 down S(ph)DTNEWNK ddPTM_A459_MK2206_30min_R2 2 SDTNEWNK 8 0 Q9P0K7;D6RB27;D6R9G4;D6RBY4;D6REL2;D6R9G6;D6RF74;D6RE17;D6RB25;D6RBW6;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 S(0.998)DT(0.002)NEWNK;S(0.993)DT(0.007)NEWNK 92.611 0.025221 7737200 64566 49405 58208 54717 55769 40468 76469 54819 34589 68793 TRUE FALSE 69509.2226 46951.61954 60148.62567 50246.44607 53579.22884 42008.0381 66428.52844 61984.03152 37597.4887 66548.29004 1.044492992 0.705527062 0.903834278 0.755037373 0.80511804 0.631241435 0.998200381 0.931414338 0.564965511 1 16.02211398 -6.404834531 0.005112758 1.648911439 0.000119304 0.004435299 0.157843793 163411.0402 258.9414836 40994.67432 42506.30691 3.94E-07 6.404834531 -1.648792134 S(ph)DVPLR ddPTM_A459_MK2206_30min_R2 2 SDVPLR 6 0 Q96RD9-4;Q96RD9-3;Q96RD9 Q96RD9-4 FCRL5 Fc receptor-like protein 5 1 S(1)DVPLR;S(1)DVPLR 101.28 0.030677 91028000 210043 255810 206270 255200 212301 232580 248170 183103 196383 216370 TRUE FALSE 226124.0536 243106.8474 213146.9388 234349.3437 203964.996 241430.9949 215584.9809 207035.1908 213464.0384 209309.8646 1.080331565 1.161468657 1.018332028 1.119628757 0.974464325 1.153462095 1.029980031 0.989132505 1.019847004 1 17.67528078 -6.593076465 0.323944877 0.988486518 1.131573657 0.270092111 0.055960407 3.081853993 0.621297969 0.067948527 0.160969029 2.55E-07 6.593076465 0.143087139 S(ph)EAEDEDDEDYVPYVPLR ddPTM_A459_MK2206_30min_R1 2 SEAEDEDDEDYVPYVPLR 18 0 D6RGI7;A0A499FJW5;Q9UJV9;D6RD33 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 1 S(1)EAEDEDDEDYVPYVPLR;S(1)EAEDEDDEDYVPYVPLR 243.83 5.38E-79 0 1059.14 1184.45 1056.46 959.57 1136.88 1106.75 1314.24 862.33 923.56 1312.83 TRUE FALSE 969.0545812 1107.34209 984.7504387 1033.476248 1091.595662 1169.413229 1226.569448 854.7907397 1019.567367 1475.473292 0.656775413 0.750499583 0.667413259 0.70043711 0.739827463 0.792568212 0.831305761 0.579333252 0.691010385 1 10.52696209 -6.327864251 3.795514075 0.756530568 0.695551366 0.112031093 0.103559406 0.724732707 20.70043146 0.032924853 0.038512747 4.70E-07 6.327864251 -0.060979202 S(ph)EAEDEDDEDYVPYVPLR ddPTM_A459_MK2206_30min_R2 4 SEAEDEDDEDYVPYVPLR 18 0 D6RGI7;A0A499FJW5;Q9UJV9;D6RD33 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 1 S(1)EAEDEDDEDYVPYVPLR;S(1)EAEDEDDEDYVPYVPLR;S(1)EAEDEDDEDYVPYVPLR;S(1)EAEDEDDEDYVPYVPLR 211.49 1.30E-30 3835400 29150.1 33460.5 28001.8 43219.6 38389.5 39000.7 34930.8 22508.4 30205.6 31810.4 TRUE FALSE 31381.85407 31798.90023 28935.36604 39688.42043 36882.13534 40484.89897 30344.344 25450.32516 32832.82849 30772.42925 1.019804248 1.033356839 0.940301651 1.289739595 1.198544809 1.315622457 0.986088675 0.827049595 1.066956015 1 14.90935072 -7.498708517 24.79903136 0.949515494 1.131490133 0.292082908 0.123870783 867.6872695 890263.6785 0.055857771 0.037420297 3.17E-08 7.498708517 0.181974638 S(ph)EAEEGEVR ddPTM_A459_MK2206_30min_R1 1 SEAEEGEVR 9 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(1)EAEEGEVR 119.03 0.007027 5441300 1704.2 1783.3 1861.6 1308.4 1525.1 1426.3 2247.4 1626.3 2212.5 3136.8 TRUE FALSE 1559.248841 1667.206846 1735.239779 1409.173195 1464.352038 1507.055873 2097.480047 1612.081431 2442.497293 3525.410466 0.442288595 0.472911413 0.492209289 0.3997189 0.41537065 0.427483803 0.594960521 0.457274818 0.692826358 1 11.78357553 -8.731317425 0.951411006 1.002716992 0.448253483 0.910930797 0.052463568 0.22530824 0.408247168 0.050095856 0.016634278 1.86E-09 8.731317425 -0.554463509 down S(ph)EAEEGEVR ddPTM_A459_MK2206_30min_R2 1 SEAEEGEVR 9 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(1)EAEEGEVR 89.9 0.029256 11594000 7656.5 7609.3 6853.2 8307.1 5847.1 4242.2 6581.4 4904.1 7436.5 7797.6 TRUE FALSE 8242.687527 7231.433227 7081.682268 7628.383357 5617.513475 4403.639894 5717.254274 5545.082708 8083.313328 7543.164951 1.092735951 0.958673617 0.93882108 1.011297434 0.744715714 0.583792072 0.757938387 0.735113542 1.071607658 1 12.88095426 -6.257181056 24.78094973 0.787817304 0.993005649 0.292044551 0.136787546 388.4497394 2260547.716 0.041567419 0.05174274 5.53E-07 6.257181056 0.205188345 S(ph)EANDAVNSSTK ddPTM_A459_MK2206_30min_R1 1 SEANDAVNSSTK 12 0 O15234;J3KSY7;K7EQ38 O15234 CASC3 Protein CASC3 1 S(1)EANDAVNSSTK 145.69 0.00067636 6246800 1645.5 1888.5 1509.3 1041.4 1079.1 1149.2 1446.6 1195 1563.9 2466.9 TRUE FALSE 1505.541584 1765.558307 1406.852921 1121.608808 1036.117162 1214.266711 1350.099953 1184.552241 1726.473001 2772.518196 0.543023157 0.636806752 0.507427841 0.404545157 0.373709779 0.437965281 0.486958014 0.427247779 0.622709349 1 11.43698121 -8.649223621 3.198516881 0.999853654 0.477450844 0.829377546 0.071623248 0.240123666 4.980119293 0.078982312 0.020926273 2.24E-09 8.649223621 -0.522402811 S(ph)EANDAVNSSTK ddPTM_A459_MK2206_30min_R2 3 SEANDAVNSSTK 12 0 O15234;J3KSY7;K7EQ38 O15234 CASC3 Protein CASC3 1 S(1)EANDAVNSSTK;S(1)EANDAVNSSTK;S(1)EANDAVNSSTK 184.87 0.00010447 16511300 109124 68637 69639 67841 53768 49158.4 62223 45635 43016 77982 TRUE FALSE 117478.6173 65228.58639 71960.7295 62298.17329 51656.79816 51029.15736 54053.04536 51599.65119 46757.45392 75437.45373 1.557298285 0.864671104 0.953912492 0.825825505 0.684763279 0.676443263 0.716527967 0.684005738 0.619817499 1 16.20299336 -1.898154223 0.912447405 0.726964319 200 0.796913778 0.118329372 178.285785 0.808580692 0.037515616 73430.84348 0.012642873 1.898154223 199.2730357 S(ph)EDEDSLEEAGSPAPGPCPR ddPTM_A459_MK2206_30min_R1 2 SEDEDSLEEAGSPAPGPCPR 20 0 Q8TBB5-2;Q8TBB5-3;Q8TBB5 Q8TBB5-2 KLHDC4 Kelch domain-containing protein 4 1 S(0.92)EDEDS(0.08)LEEAGSPAPGPCPR;S(1)EDEDSLEEAGSPAPGPCPR 240.34 4.17E-30 18513000 617.6 698.33 668.76 348.33 482.46 594.34 549.98 582.42 784.39 874.77 TRUE FALSE 565.0698769 652.8685901 623.3664345 375.158437 463.2425966 627.9910172 513.2918377 577.3279633 865.9301475 983.1431118 0.574758517 0.664062619 0.634054622 0.381590872 0.471185315 0.638758498 0.522092696 0.58722678 0.880777312 1 9.941257628 -8.341110204 2.786557912 0.995888434 0.55444019 0.789174988 0.080083052 0.122165663 1.767793432 0.082211236 0.022687166 4.56E-09 8.341110204 -0.441448244 S(ph)EDEDSLEEAGSPAPGPCPR ddPTM_A459_MK2206_30min_R2 2 SEDEDSLEEAGSPAPGPCPR 20 0 Q8TBB5-2;Q8TBB5-3;Q8TBB5 Q8TBB5-2 KLHDC4 Kelch domain-containing protein 4 1 S(1)EDEDSLEEAGSPAPGPCPR;S(1)EDEDSLEEAGSPAPGPCPR 364.14 0 30379000 22046.2 26748 24668 26463 22010.6 20017.6 31428 26136 17795.1 28096 TRUE FALSE 23734.07402 25419.73322 25490.41881 24300.88825 21146.35325 20779.38379 27301.46585 29552.06494 19342.88563 27179.22982 0.873243068 0.935263191 0.937863912 0.894097751 0.778033572 0.764531737 1.004497406 1.087303251 0.711678946 1 14.73021695 -7.287399477 24.93132023 0.958145169 0.867925347 0.139469492 0.104994099 1554.152209 1492555.736 0.044722186 0.030163544 5.16E-08 7.287399477 -0.090219822 S(ph)EDEESLAGQK ddPTM_A459_MK2206_30min_R2 1 SEDEESLAGQK 11 0 F8W126;Q96EZ8-3;Q96EZ8;Q96EZ8-2;F8W0I9;F8VVA6;F8VP44 F8W126 MCRS1 Microspherule protein 1 1 S(1)EDEESLAGQK 158.25 0.00057087 5093700 26642 18012 20845 17602 15149 14221 21458 15175 12988 22719 TRUE FALSE 28681.732 17117.55027 21539.9619 16163.86029 14554.17414 14762.19012 18640.53882 17158.4246 14117.67276 21977.68089 1.30503906 0.778860625 0.980083477 0.735467057 0.662225201 0.671690075 0.848157679 0.780720436 0.64236408 1 14.42375154 -2.372124282 1.197841917 0.7642125 199.9999997 0.608560587 0.121756356 363.8525687 1.854233591 0.034852416 197681.7889 0.004244981 2.372124282 199.2357872 S(ph)EDEESLAGQKR ddPTM_A459_MK2206_30min_R2 1 SEDEESLAGQKR 12 1 F8W126;Q96EZ8-3;Q96EZ8;Q96EZ8-2;F8W0I9;F8VVA6;F8VP44 F8W126 MCRS1 Microspherule protein 1 1 S(1)EDEESLAGQKR 118.76 0.0090353 0 11532 14237 13657 16731 13890 11179 12898 10153 9605.4 18027 TRUE FALSE 12414.89879 13530.01128 14112.31756 15364.02378 13344.60881 11604.42468 11204.47711 11480.03196 10440.86033 17438.78047 0.711913245 0.775857653 0.80924911 0.881026274 0.765226034 0.665437856 0.642503478 0.658304747 0.598715051 1 14.09001153 -6.628603819 5.06480923 0.687788323 0.797407101 0.085999329 0.111296474 0.364244202 14.89060194 0.03553383 0.035448404 2.35E-07 6.628603819 0.109618777 S(ph)EEEQSSSSVK ddPTM_A459_MK2206_30min_R2 2 SEEEQSSSSVK 11 0 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 S(0.999)EEEQSSSSVK;S(1)EEEQSSSSVK 146.67 0.0029116 2536500 25877 19384.2 18536.4 24325 20711.8 18930.7 18247 15169 17682.2 17432.9 TRUE FALSE 27858.16302 18421.60882 19154.39432 22337.56969 19898.55066 19651.12105 15851.14698 17151.64038 19220.16579 16864.0659 1.651924464 1.092358683 1.135811164 1.324566081 1.179937909 1.165265907 0.939936257 1.0170525 1.13971126 1 14.04166479 -4.759832389 24.99940163 1.117077756 1.651925123 0.713277922 0.102903129 24.74285877 384795.2627 0.028022825 0.172926054 1.74E-05 4.759832389 0.534847367 S(ph)EESPVYSNSSVR ddPTM_A459_MK2206_30min_R1 1 SEESPVYSNSSVR 13 0 Q03188;H0Y8J2 Q03188 CENPC Centromere protein C 1 S(0.979)EES(0.021)PVYSNSSVR 184.51 0.00012348 15175000 4703.9 3314.1 3655.6 3418.8 4526.5 5111.1 4675.6 3781.4 3525.5 2941.4 TRUE FALSE 4303.808604 3098.351488 3407.468057 3682.116568 4346.19992 5400.486065 4363.699255 3748.339618 3891.988341 3305.802838 1.301895126 0.937246303 1.030753564 1.113834293 1.314718431 1.633638281 1.320011951 1.133866659 1.177320164 1 11.69078497 -6.189063437 4.904045356 1.291131033 1.075868921 0.164577512 0.177198522 0.343291105 15.59769171 0.055524972 0.071978791 6.47E-07 6.189063437 -0.215262113 S(ph)EGFSMDR ddPTM_A459_MK2206_30min_R1 2 SEGFSMDR 8 0 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7ERA4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 S(1)EGFSMDR;S(1)EGFSMDR 108.43 0.012879 16310700 2111.74 1864.54 2317.64 1768.52 2454.8 2039.1 3220.5 3495 3593.1 3952 TRUE FALSE 1932.125424 1743.158107 2160.325054 1904.731717 2357.020118 2154.55208 3005.666321 3464.443583 3966.615603 4441.603596 0.435006272 0.392461432 0.486384029 0.428838746 0.530668725 0.485084279 0.676707467 0.779998374 0.893059346 1 12.11686493 -7.755529934 0.820360718 1.00067505 0.431876217 0.974544586 0.032443853 0.081606131 0.102421405 0.028021385 0.012510966 1.76E-08 7.755529934 -0.568798833 down S(ph)EGFSMDR ddPTM_A459_MK2206_30min_R2 2 SEGFSMDR 8 0 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7ERA4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 S(1)EGFSMDR;S(1)EGFSMDR 152.54 0.00098667 25244000 34549 36694 31639 33342 26747 31444 41280 47500 43118 52800 TRUE FALSE 37194.098 34871.82932 32693.82847 30617.85194 25696.77839 32640.62345 35859.88641 53708.41309 46868.3257 51077.14032 0.728194605 0.682728694 0.640087293 0.599443347 0.503097437 0.639045633 0.702073103 1.051515663 0.917598859 1 15.64039013 -7.664136213 4.61723594 0.987734084 0.63075462 0.86471584 0.06335388 0.07630796 2.789845926 0.034328636 0.018870214 2.17E-08 7.664136213 -0.356979464 S(ph)EGSEYEEIPK ddPTM_A459_MK2206_30min_R1 2 SEGSEYEEIPK 11 0 P48634 P48634 PRRC2A Protein PRRC2A 1 S(0.997)EGS(0.003)EYEEIPK;S(0.999)EGS(0.001)EYEEIPK 212.68 1.97E-05 15291000 4214.4 4658.3 4848.2 3649.2 3335.2 2671.9 4482.1 4347.2 5862.5 7851.7 TRUE FALSE 3855.943149 4355.043823 4519.117692 3930.262016 3202.351922 2823.180669 4183.107287 4309.192889 6471.927854 8824.427873 0.436962396 0.49352138 0.512114525 0.445384344 0.362896266 0.319927899 0.474037223 0.48832547 0.733410477 1 13.10728703 -8.480754534 1.744068235 0.998994071 0.432705958 0.917794679 0.054139227 0.103023754 0.693697393 0.058939944 0.016944056 3.31E-09 8.480754534 -0.566288113 down S(ph)EGSEYEEIPK ddPTM_A459_MK2206_30min_R2 2 SEGSEYEEIPK 11 0 P48634 P48634 PRRC2A Protein PRRC2A 1 S(1)EGSEYEEIPK;S(1)EGSEYEEIPK 198.97 1.96E-05 16700200 80775 59737 61003 51227 54926 35073 70013 56752 45054 66652 TRUE FALSE 86959.19611 56770.54745 63036.80957 47041.59023 52769.32926 36407.72759 60820.209 64169.68126 48972.71548 64477.1507 1.348682365 0.880475437 0.977661216 0.729585438 0.818419063 0.564660926 0.943283137 0.995231343 0.759535974 1 15.97650037 S(ph)EIPSPQSQLLEDAEANLVGR ddPTM_A459_MK2206_30min_R1 1 SEIPSPQSQLLEDAEANLVGR 21 0 Q9ULJ8-3;Q9ULJ8;Q9ULJ8-4;Q9ULJ8-5 Q9ULJ8-3 PPP1R9A Neurabin-1 1 S(0.933)EIPS(0.067)PQSQLLEDAEANLVGR 249.26 6.84E-39 12115000 5579.8 5593.9 5385.5 5417.1 5712.8 5435.9 5937.2 5729.2 4869.6 4162.6 TRUE FALSE 5105.208709 5229.736093 5019.947265 5834.325981 5485.247079 5743.67596 5541.140221 5679.110208 5375.812346 4678.294314 1.091254283 1.1178724 1.073029384 1.247105374 1.17248867 1.22772865 1.184436004 1.213927519 1.149096655 1 12.19176691 -5.743421699 24.99998115 1.18262207 1.096434039 0.209170624 0.065412315 311.1212124 431685.1659 0.016329501 0.028209927 1.81E-06 5.743421699 -0.086188031 S(ph)ENGSVWK ddPTM_A459_MK2206_30min_R1 2 SENGSVWK 8 0 P16157-14;H0YBS0;P16157-15;P16157-12;P16157-21;P16157;P16157-3;P16157-16;P16157-5;P16157-8;P16157-10;P16157-13;P16157-4;P16157-7;P16157-6;P16157-9;P16157-11;P16157-2 P16157-14 ANK1 Ankyrin-1 1 S(1)ENGSVWK;S(1)ENGSVWK 96.492 0.021035 1374400000 9352.7 9365.6 9353.5 7316.4 8955.9 8146.6 9674.3 9002.8 8515.2 7302.5 TRUE FALSE 8557.203752 8755.897738 8718.61048 7879.910396 8599.167539 8607.853452 9028.945099 8924.089469 9400.385512 8207.188831 1.042647358 1.066857108 1.062313864 0.960122955 1.04776041 1.04881874 1.1001264 1.087350328 1.145384334 1 13.00267243 -7.113321218 3.334471061 1.090485847 1.035550251 0.201186776 0.04351376 0.368150679 7.637721026 0.017591693 0.013383625 7.70E-08 7.113321218 -0.054935596 S(ph)EPDDELLFDFLNSSQK ddPTM_A459_MK2206_30min_R1 1 SEPDDELLFDFLNSSQK 17 0 Q8TBA6-2;Q8TBA6 Q8TBA6-2 GOLGA5 Golgin subfamily A member 5 1 S(1)EPDDELLFDFLNSSQK 93.152 0.014411 0 192.46 162.39 123.44 227.97 162.89 152.93 169.41 171.24 0 0 TRUE FALSE 176.0902664 151.8183815 115.0612367 245.5282889 156.4017464 161.5887644 158.108968 169.7428667 0 0 0 S(ph)EPSLEPESFR ddPTM_A459_MK2206_30min_R2 1 SEPSLEPESFR 11 0 Q9C0B5-2;Q9C0B5;H0YEF4 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 S(1)EPSLEPESFR 95.618 0.021186 0 4904.2 3215.6 4296.7 2378.9 3029.4 3647.6 5704.9 4338.7 4000.7 5733.3 TRUE FALSE 5279.669323 3055.91798 4439.949833 2184.53626 2910.450534 3786.411974 4955.839777 4905.782987 4348.673654 5546.222891 0.951939622 0.550990835 0.800535774 0.393878195 0.524762634 0.682701011 0.89355222 0.884526836 0.784078415 1 12.43728988 -7.191971696 4.308580809 0.881631254 0.631980706 0.374001262 0.151629836 0.247958479 8.984780857 0.060810029 0.045695419 6.43E-08 7.191971696 -0.249650548 S(ph)ESDLEETEPVVIPR ddPTM_A459_MK2206_30min_R1 1 SESDLEETEPVVIPR 15 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 S(1)ESDLEETEPVVIPR 91.307 0.01467 15415000 4186.3 3373.6 3060.8 2655.2 3201.6 1703.4 2130.7 2825.5 2193 1676.6 TRUE FALSE 3830.233202 3153.978027 2853.041424 2859.703964 3074.073493 1799.845036 1988.564891 2800.796951 2420.970198 1884.309866 2.032698163 1.673810706 1.514104169 1.517639968 1.631405507 0.95517466 1.055327962 1.486378118 1.284804714 1 10.87982051 -1.522878751 0.303941063 1.133763555 8.797778139 0.669533479 0.186347205 36.17585253 0.516053645 0.200919851 151.4171434 0.03 1.522878751 7.664014584 S(ph)ESELIDELSEDFDR ddPTM_A459_MK2206_30min_R1 1 SESELIDELSEDFDR 15 0 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7EVY3;E7ES10;E9PDE4;H0Y9H6;A0A0A0MR45;H0Y7F0;E7EQA0;H0YD33;E7EQ12;D6RC54;P20810-5;E9PCH5;P20810-2;P20810-3 P20810-6;P20810-5 CAST Calpastatin 1 S(0.984)ES(0.016)ELIDELSEDFDR 149.59 0.00040343 0 316.9 163.66 244.59 0 41.705 127.59 261.13 220.66 0 164.9 TRUE FALSE 289.9459909 153.0057043 227.9879123 0 40.04380154 134.8140355 243.7104942 218.7307929 0 185.3290569 1.564492885 0.825589396 1.230178991 0 0.216068663 0.727430646 1.315015024 1.180229353 0 1 7.533945283 -8.243024131 24.95169535 0.499999695 0.849709896 0.079202983 0.511904854 2157.396184 2923169.808 0.365273118 0.137493741 5.71E-09 8.243024131 0.349710201 S(ph)ESELIDELSEDFDR ddPTM_A459_MK2206_30min_R2 2 SESELIDELSEDFDR 15 0 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7EVY3;E7ES10;E9PDE4;H0Y9H6;A0A0A0MR45;H0Y7F0;E7EQA0;H0YD33;E7EQ12;D6RC54;P20810-5;E9PCH5;P20810-2;P20810-3 P20810-6;P20810-5 CAST Calpastatin 1 S(0.976)ES(0.024)ELIDELSEDFDR;S(1)ESELIDELSEDFDR 265.64 3.22E-37 20561900 16963.8 16552.6 20787.9 23150.4 13693.9 20018.4 10424.9 10060 16141.3 16750.7 TRUE FALSE 18262.56157 15730.62195 21480.95821 21258.93827 13156.20868 20780.21424 9056.098107 11374.87654 17545.2411 16204.12603 1.127031568 0.970778796 1.325647441 1.311945996 0.81190486 1.282402655 0.55887606 0.701974085 1.082763801 1 13.98407359 -7.249993048 24.97127221 0.811067983 1.132245955 0.348073493 0.201488653 796.4805247 1737601.634 0.077575565 0.0595598 5.62E-08 7.249993048 0.321177972 S(ph)ESELIDELSEDFDRSECK ddPTM_A459_MK2206_30min_R1 3 SESELIDELSEDFDRSECK 19 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7EVY3;E7ES10;E9PDE4;H0Y9H6;A0A0A0MR45;H0Y7F0;E7EQA0;H0YD33;E7EQ12;D6RC54;P20810-5;E9PCH5;P20810-2;P20810-3 P20810-6;P20810-5 CAST Calpastatin 1 S(0.836)ES(0.163)ELIDELSEDFDRSECK;S(0.796)ES(0.204)ELIDELSEDFDRSECK;S(0.968)ES(0.032)ELIDELSEDFDRSECK 184.56 5.20E-14 59010300 2693.24 2325.01 2766.33 3016 2940.63 2531.27 2637.97 3163.54 1783.12 1501.86 TRUE FALSE 2464.165795 2173.651426 2578.559227 3248.292843 2823.49848 2674.58832 2461.995835 3135.881503 1968.481705 1687.921755 1.45988153 1.287767884 1.527653293 1.924433305 1.672766212 1.584545203 1.458595949 1.857835823 1.166216206 1 10.72103231 -8.443215472 5.451529761 1.002621212 1.59123094 0.575028181 0.179167205 0.148395923 6.978283385 0.184091154 0.04781517 3.60E-09 8.443215472 0.588609728 S(ph)ESETSTMAAK ddPTM_A459_MK2206_30min_R1 2 SESETSTMAAK 11 0 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.998)ES(0.001)ETSTMAAK;S(0.994)ES(0.006)ETSTMAAK 120.03 0.0048475 10292900 3457.7 3482.4 3390.5 2930.9 3261.8 3363.7 3337.7 3404.7 3417.4 3468.6 TRUE FALSE 3163.604458 3255.695127 3160.362306 3156.638426 3131.875599 3554.149787 3115.048123 3374.933067 3772.650959 3898.316355 0.811530971 0.835154162 0.810699291 0.809744038 0.803391853 0.911714049 0.799075252 0.865741197 0.967764187 1 11.92863546 -8.246689545 2.502853864 0.99880744 0.827209737 0.80403915 0.030904134 0.118837833 1.355282524 0.028250419 0.008195871 5.67E-09 8.246689545 -0.171597703 S(ph)ESGGLGVSMVEYVLSSSPADKLDSR ddPTM_A459_MK2206_30min_R1 1 SESGGLGVSMVEYVLSSSPADKLDSR 26 1 Q8TB72-3;Q8TB72;C9JW01;Q8TB72-2;Q8TB72-4;A0A0A0MR59 Q8TB72-3 PUM2 Pumilio homolog 2 1 S(0.492)ES(0.492)GGLGVS(0.014)MVEY(0.002)VLSSSPADKLDSR 64.768 0.00096103 855070 155.93 0 252.28 0 127.92 76.894 78.533 0 0 0 TRUE FALSE 142.6673347 0 235.1559365 0 122.8246755 81.24767183 73.29420686 0 0 0 0 S(ph)ESGGSEYGTGPGR ddPTM_A459_MK2206_30min_R2 1 SESGGSEYGTGPGR 14 0 A0A5F9ZHX5;Q12873-2;Q12873;Q12873-3 A0A5F9ZHX5;Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 S(0.924)ES(0.076)GGSEYGTGPGR 132.24 0.0011911 0 8267.5 6113.1 7024.9 7465.7 5428.9 8960.9 9143.1 5734 7721 7652.4 TRUE FALSE 8900.466157 5809.532343 7259.10666 6855.728428 5215.734108 9301.913329 7942.599987 6483.453488 8392.558624 7402.702815 1.202326553 0.784785299 0.980602199 0.92611153 0.704571592 1.256556363 1.072932439 0.875822473 1.13371546 1 12.8538364 -6.765100323 24.99991338 1.060364645 0.91592727 0.191641542 0.151627791 170.4455681 1163932.747 0.051482319 0.047151883 1.72E-07 6.765100323 -0.144437375 S(ph)ESLDPDSSMDTTLILK ddPTM_A459_MK2206_30min_R2 1 SESLDPDSSMDTTLILK 17 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.5)ES(0.5)LDPDSSMDTTLILK 83.106 0.035187 0 5222.6 7670.3 5374.2 6095 5120.8 3893.2 5893.8 3796.6 4103.7 5188 TRUE FALSE 5622.446271 7289.404056 5553.373146 5597.019003 4919.731662 4041.358454 5119.93698 4292.828656 4460.632408 5018.715985 1.120295767 1.452444027 1.106532659 1.115229278 0.980276963 0.805257454 1.020168704 0.855363935 0.88879953 1 12.29310259 -5.945418381 1.429190102 0.910580768 1.277936818 0.644111772 0.104005926 0.235062625 0.974696192 0.034412307 0.065032953 1.13E-06 5.945418381 0.36735605 S(ph)ESLELPQAAPPQIYHEK ddPTM_A459_MK2206_30min_R2 1 SESLELPQAAPPQIYHEK 18 0 B0QY58;B0QY55;B0QY57;B0QY56;H0YGT9;Q15040 B0QY58 JOSD1 Josephin-1 1 S(0.5)ES(0.5)LELPQAAPPQIYHEK 85.062 0.0051441 2619200 31968 37622 40635 38234 38437 33388 49808 34206 29641 43446 TRUE FALSE 34415.49466 35753.74619 41989.75062 35110.1599 36927.77025 34658.60374 43268.14977 38676.84165 32219.1206 42028.36058 0.8188636 0.850705231 0.999081336 0.835392088 0.878639322 0.824648006 1.029498871 0.920255778 0.766604268 1 15.35907556 S(ph)ESLSNCSIGK ddPTM_A459_MK2206_30min_R1 1 SESLSNCSIGK 11 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.566)ES(0.11)LS(0.324)NCSIGK 193.28 4.22E-19 0 2562.1 2505 2193.9 2108.6 2349.7 2032.9 2369.6 2141.1 2569.2 2607.6 TRUE FALSE 2344.179941 2341.924045 2044.984181 2271.004737 2256.106473 2148.001041 2211.528308 2122.380588 2836.277534 2930.649174 0.79988419 0.79911443 0.697792216 0.77491525 0.769831645 0.732943765 0.754620624 0.724201521 0.967798384 1 11.51700456 -8.296235932 6.535625442 0.988252511 0.756265013 0.894482447 0.031224638 0.064620861 8.614131054 0.028981814 0.007896474 5.06E-09 8.296235932 -0.231987498 S(ph)ESPDLILHDSGVSAAR ddPTM_A459_MK2206_30min_R2 1 SESPDLILHDSGVSAAR 17 0 P0CG40 P0CG40 SP9 Transcription factor Sp9 1 S(0.563)ES(0.437)PDLILHDSGVSAAR 94.313 0.0045349 6857700 4683 13851 10088 28855 23175 44013 21123 14365 27026 12631 TRUE FALSE 5041.534081 13163.17948 10424.32889 26497.4542 22265.03305 45687.94556 18349.52473 16242.55482 29376.67263 12218.8515 0.412602942 1.077284512 0.853134919 2.168571587 1.822187056 3.739135838 1.501738909 1.329302907 2.404208989 1 13.57682107 -5.756715928 23.41209651 2.053658476 0.810634207 0.371034534 0.721203427 56.57781145 280420.6488 0.199679319 0.331204177 1.75E-06 5.756715928 -1.243024269 S(ph)ESPEPAATCSLPSDLTR ddPTM_A459_MK2206_30min_R2 1 SESPEPAATCSLPSDLTR 18 0 Q9NS37;E9PIM0 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 S(0.753)ES(0.193)PEPAAT(0.039)CS(0.014)LPSDLTR 86.411 0.0072672 3354200 7814.8 7845.9 7189.6 8439.3 7427.8 5884.9 8449.1 6282.6 7888.7 9613.1 TRUE FALSE 8413.107097 7456.284015 7429.297676 7749.782194 7136.14725 6108.853993 7339.723021 7103.757391 8574.844866 9299.425334 0.904691074 0.801800514 0.798898578 0.833361408 0.767375079 0.656906612 0.789266299 0.763892083 0.922083307 1 13.18292585 -8.435816265 3.369999717 0.9983695 0.786628835 0.589180989 0.058836287 0.160100815 3.462264021 0.059811485 0.015891756 3.67E-09 8.435816265 -0.211740665 S(ph)ESPFRETEPLVSPHQDK ddPTM_A459_MK2206_30min_R1 1 SESPFRETEPLVSPHQDK 18 1 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 S(0.49)ES(0.49)PFRET(0.019)EPLVSPHQDK 73.21 0.010066 6085900 2036.5 2073.1 2138.7 1811.2 2423.3 2336.8 2033.9 1994.7 2196.9 1760.6 TRUE FALSE 1863.284981 1938.140813 1993.531003 1950.698938 2326.77483 2469.107597 1898.222242 1977.260548 2425.275617 1978.71642 0.941663475 0.979493976 1.007486966 0.985840577 1.175901108 1.247832975 0.959320003 0.999264234 1.225681251 1 10.95034915 -6.181677632 8.952233019 1.101450312 0.98032055 0.296845479 0.092517943 0.564148349 59.60186119 0.028527885 0.036870684 6.58E-07 6.181677632 -0.121129763 S(ph)ESPPAELPSLR ddPTM_A459_MK2206_30min_R1 1 SESPPAELPSLR 12 0 Q14669;Q14669-2;Q14669-3;G5E9G6;H7C1L9 Q14669;H7C1L9 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.622)ES(0.378)PPAELPSLR 127.52 0.0025814 127590000 2353.2 2413.1 2287.9 1639.4 2228.3 2072.7 2507.4 1792.7 2117.1 1860.9 TRUE FALSE 2153.047983 2256.006751 2132.603722 1765.666872 2139.542092 2190.054483 2340.135921 1777.026613 2337.180121 2091.442341 1.029456056 1.078684651 1.019680859 0.844234066 1.022998364 1.047150304 1.118910082 0.849665601 1.117496799 1 11.03028251 -6.469006542 24.99996754 1.024356093 0.992610374 0.031207228 0.089866532 1585.867254 735937.4971 0.028413412 0.032217732 3.40E-07 6.469006542 -0.031745719 S(ph)ESPPAELPSLR ddPTM_A459_MK2206_30min_R2 1 SESPPAELPSLR 12 0 Q14669;Q14669-2;Q14669-3;G5E9G6;H7C1L9 Q14669;H7C1L9 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.613)ES(0.387)PPAELPSLR 156.36 0.00043463 13358000 18401 20133 16467 19167 18114 18934 21094 17837 14194 19000 TRUE FALSE 19809.79471 19133.2245 17016.00156 17600.99479 17402.75334 19654.54664 18324.33246 20168.35714 15428.56846 18380.03156 1.077788939 1.040978871 0.925787396 0.957615047 0.946829351 1.069342377 0.996969587 1.097297199 0.839420129 1 14.16585162 -5.036535499 8.086610073 0.984410528 1.068987387 0.185018268 0.068575303 0.410161298 85.70217063 0.017052638 0.047492904 9.19E-06 5.036535499 0.084576859 S(ph)ESPVPQNEK ddPTM_A459_MK2206_30min_R2 1 SESPVPQNEK 10 0 Q9UIF8-4;Q9UIF8-2;Q9UIF8-5;Q9UIF8-3;Q9UIF8 Q9UIF8-4 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B 1 S(0.521)ES(0.479)PVPQNEK 126.71 0.0034106 9748100 139550 165100 159170 170120 169510 133350 173030 142740 134370 159070 TRUE FALSE 150234.0553 156901.3741 164476.6484 156220.6518 162854.1857 138424.7277 150310.9532 161396.6081 146057.2597 153879.5589 0.97630937 1.019637535 1.068866128 1.0152138 1.05832241 0.899565405 0.976809098 1.048850213 0.949166093 1 17.23144207 S(ph)ESSDFEVVPK ddPTM_A459_MK2206_30min_R1 1 SESSDFEVVPK 11 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.974)ES(0.01)S(0.016)DFEVVPK 117.23 0.0046612 0 901.14 1135.6 945.33 958.93 1034.2 772.02 968.98 898.65 1354.5 1391.3 TRUE FALSE 824.4933109 1061.672234 881.1636334 1032.786955 993.005624 815.7311052 904.3411122 890.7931978 1495.305122 1563.664748 0.527282662 0.678964103 0.563524652 0.660491295 0.635050208 0.521679028 0.57834719 0.569682983 0.956282428 1 10.61071551 -8.282233526 6.490284489 0.984127166 0.594523367 0.902949826 0.050656764 0.049844637 8.737972499 0.044175648 0.01260457 5.22E-09 8.282233526 -0.389603799 S(ph)ESSDFEVVPK ddPTM_A459_MK2206_30min_R2 3 SESSDFEVVPK 11 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.959)ES(0.03)S(0.011)DFEVVPK;S(0.999)ES(0.001)SDFEVVPK;S(0.407)ES(0.296)S(0.296)DFEVVPK 138.89 0.0012132 7364600 79892.6 62765.8 69121.4 66050 53497.8 51310.9 76950 60775.9 46205.8 77067 TRUE FALSE 86009.23888 59648.94164 71425.87298 60653.50372 51397.20757 53263.57225 66846.37257 68719.5188 50224.69696 74552.3101 1.153676375 0.800095149 0.958063846 0.813569742 0.689411334 0.714445631 0.896637173 0.921762434 0.67368398 1 16.18596544 -2.670283706 1.499769399 0.819119362 199.9999992 0.423967213 0.110329612 818.6966018 3.997665134 0.030771051 558941.7473 0.002136566 2.670283706 199.1808799 S(ph)ESVEGFLSPSR ddPTM_A459_MK2206_30min_R1 1 SESVEGFLSPSR 12 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.943)ES(0.057)VEGFLSPSR 107.39 0.0085025 4070700 1028 1039.3 906.74 927.26 1357.4 925.18 1061.5 1074.3 963.91 769.01 TRUE FALSE 940.5632018 971.6413811 845.1930151 998.6777259 1303.331884 977.5628921 990.6892718 1064.907508 1064.111894 864.2807645 1.088261177 1.124219607 0.977914874 1.155501507 1.50799594 1.131070981 1.146258615 1.232131446 1.231210895 1 9.755356243 -5.995840967 24.91245722 1.223589183 1.069068541 0.204103381 0.125406941 169.4732542 1015116.439 0.035032548 0.051720488 1.01E-06 5.995840967 -0.154520642 S(ph)ESVEGFLSPSR ddPTM_A459_MK2206_30min_R2 2 SESVEGFLSPSR 12 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(1)ESVEGFLSPSR;S(0.975)ES(0.025)VEGFLSPSR 124.38 0.003067 6370200 23914.7 34505 27250.2 32675.7 30721 29152 34968 23225.2 32609.3 25030.2 TRUE FALSE 25745.62782 32791.53187 28158.70807 30005.99079 29514.73918 30261.39979 30376.6596 26260.81338 35445.59797 24213.46662 1.063277234 1.354268366 1.162935837 1.239227379 1.218939016 1.2497756 1.254535754 1.084554054 1.463879523 1 14.56352202 -10.57836194 5.513135529 0.999998569 1.230541597 0.280194469 0.111700895 1.77E-06 3.03E-07 0.097472958 0.023640518 2.64E-11 10.57836194 0.230543027 S(ph)ETPPHWR ddPTM_A459_MK2206_30min_R1 1 SETPPHWR 8 0 Q13427;E9PG73;C9JM79 Q13427 PPIG Peptidyl-prolyl cis-trans isomerase G 1 S(0.927)ET(0.073)PPHWR 104.2 0.0148 13963000 5506.8 5113.4 5249.6 4587.8 5833.5 4283.6 5218.1 4684.7 4903.5 3937.1 TRUE FALSE 5038.417743 4780.516731 4893.271778 4941.153151 5601.139342 4526.13373 4870.01007 4643.742162 5413.236372 4424.857672 1.138662103 1.080377514 1.1058597 1.116680697 1.265834917 1.022887981 1.100602648 1.049467013 1.223369603 1 12.11141534 S(ph)ETPPHWR ddPTM_A459_MK2206_30min_R2 1 SETPPHWR 8 0 Q13427;E9PG73;C9JM79 Q13427 PPIG Peptidyl-prolyl cis-trans isomerase G 1 S(0.814)ET(0.186)PPHWR 72.607 0.041627 0 21192 20321 19749 26452 23734 18194 21711 18531 22549 26603 TRUE FALSE 22814.47581 19311.88869 20407.4218 24290.78698 22802.08391 18886.38542 18860.31962 20953.06533 24510.27126 25734.94629 0.886517328 0.75041496 0.792984822 0.943883337 0.886035807 0.733880895 0.732868039 0.814187257 0.952411984 1 14.65144115 -8.350155032 3.639313685 0.99536344 0.815113985 0.477548527 0.067063092 0.216995952 5.077049582 0.069162654 0.018576548 4.47E-09 8.350155032 -0.180249454 S(ph)EVLAEESIVCLQK ddPTM_A459_MK2206_30min_R1 2 SEVLAEESIVCLQK 14 0 O43663-3;O43663-2;O43663-4;O43663;H0YLA0;H0YM42 O43663-3 PRC1 Protein regulator of cytokinesis 1 1 S(1)EVLAEESIVCLQK;S(1)EVLAEESIVCLQK 257.04 1.30E-35 9139800 1627.97 1883.38 1615.09 1819.08 1712.68 1246.94 1625.33 1308.53 1428.29 1336.68 TRUE FALSE 1489.502603 1760.77162 1505.462191 1959.185857 1644.460329 1317.540665 1516.907201 1297.08966 1576.765857 1502.27801 0.991495977 1.172067759 1.002119568 1.304143337 1.094644479 0.877028524 1.009738005 0.863415195 1.049583264 1 10.55293611 -6.644567769 6.75080591 0.955169164 1.123299918 0.379301288 0.097835169 0.214023437 11.82089201 0.030996444 0.030931578 2.27E-07 6.644567769 0.168130754 S(ph)FADIGK ddPTM_A459_MK2206_30min_R1 1 SFADIGK 7 0 Q9Y6M7-6;Q9Y6M7-13;Q9Y6M7-11;C9JRP1;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7-7;Q9Y6M7-14;Q9Y6M7-3;Q9Y6M7;Q9Y6M7-4;E7EW28;Q6U841-2;Q6U841-4;F8WDX9;Q6U841;Q6U841-3;C9J240 Q9Y6M7-6 SLC4A7;SLC4A10 Sodium bicarbonate cotransporter 3;Anion exchange protein;Sodium-driven chloride bicarbonate exchanger 1 S(1)FADIGK 85.731 0.035833 10076000 1933.7 2123.6 1547.8 1488.8 3021.4 2653.6 3970.3 3119.3 4009.7 3931.2 TRUE FALSE 1769.228661 1985.353254 1442.739648 1603.467634 2901.05124 2803.844539 3705.448531 3092.028289 4426.522664 4418.226735 0.40043863 0.449355222 0.326542691 0.362921084 0.65660986 0.634608567 0.83867324 0.699834679 1.00187766 1 12.10925174 -7.076412737 0.623137076 0.98222623 0.352144225 0.875190998 0.084536613 0.268129099 0.217224665 0.073919674 0.061201445 8.39E-08 7.076412737 -0.630082005 down S(ph)FADIGK ddPTM_A459_MK2206_30min_R2 2 SFADIGK 7 0 Q9Y6M7-6;Q9Y6M7-13;Q9Y6M7-11;C9JRP1;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7-7;Q9Y6M7-14;Q9Y6M7-3;Q9Y6M7;Q9Y6M7-4;E7EW28;Q6U841-2;Q6U841-4;F8WDX9;Q6U841;Q6U841-3;C9J240 Q9Y6M7-6 SLC4A7;SLC4A10 Sodium bicarbonate cotransporter 3;Anion exchange protein;Sodium-driven chloride bicarbonate exchanger 1 S(1)FADIGK;S(1)FADIGK 102.62 0.01916 10742800 125445 54197 89751 67784 67634 83789 144570 62535 97611 97158 TRUE FALSE 135049.1657 51505.65579 92743.25354 62245.83037 64978.34933 86977.64911 125587.7853 70708.53921 106101.0283 93987.74242 1.436880621 0.548003968 0.98675903 0.662276045 0.691349187 0.925414813 1.336214512 0.752316604 1.12888155 1 16.520185 -7.006175651 24.7414224 1.047584567 0.839480466 0.099215833 0.263864484 529.0639389 2119586.803 0.090560347 0.077211992 9.86E-08 7.006175651 -0.208104101 S(ph)FAGNLNTYK ddPTM_A459_MK2206_30min_R1 1 SFAGNLNTYK 10 0 Q01813;Q01813-2;B1APP6 Q01813 PFKP "ATP-dependent 6-phosphofructokinase, platelet type" 1 S(1)FAGNLNTYK 169.09 0.00024582 377230000 4842.4 4751 5226.2 4216.1 4195.2 4028.2 5544.8 4362.4 4791.6 5371.8 TRUE FALSE 4430.528452 4441.709036 4871.460105 4540.824753 4028.096301 4256.273203 5174.916509 4324.259997 5289.703967 6037.299139 0.733859355 0.735711273 0.806893943 0.752128501 0.667201709 0.704996242 0.857157545 0.716257369 0.876170593 1 12.55968757 -8.514545867 2.88190247 0.999842607 0.748047982 0.719336349 0.050634871 0.131579535 2.639946381 0.050120366 0.013428364 3.06E-09 8.514545867 -0.251794626 S(ph)FAGNLNTYK ddPTM_A459_MK2206_30min_R2 4 SFAGNLNTYK 10 0 Q01813;Q01813-2;B1APP6 Q01813 PFKP "ATP-dependent 6-phosphofructokinase, platelet type" 1 S(1)FAGNLNTYK;S(1)FAGNLNTYK;S(1)FAGNLNTYK;S(1)FAGNLNTYK 137.95 0.0016905 802055000 1138470 1106810 988090 1069760 1094910 898050 1211410 869080 999750 1121000 TRUE FALSE 1225632.139 1051847.425 1021032.427 982357.186 1051918.332 932225.922 1052350.412 982671.74 1086706.448 1084421.862 1.130217106 0.969961472 0.941545411 0.905881023 0.970026859 0.859652461 0.970425301 0.90617109 1.002106732 1 20.04849467 -4.739939194 2.899886531 0.938905224 1.175505378 0.626239093 0.04261071 0.283852461 3.054798151 0.010113891 0.167652382 1.82E-05 4.739939194 0.236600154 S(ph)FAGNLNTYKR ddPTM_A459_MK2206_30min_R1 2 SFAGNLNTYKR 11 1 Q01813;Q01813-2;B1APP6 Q01813 PFKP "ATP-dependent 6-phosphofructokinase, platelet type" 1 S(1)FAGNLNTYKR;S(1)FAGNLNTYKR 160.22 0.0010711 99312000 4948.6 4603.3 5556 5252.3 5727.4 4470 4389.6 5030.7 3271.7 1998.62 TRUE FALSE 4527.695584 4303.624333 5178.8742 5656.833056 5499.26553 4723.087537 4096.777793 4986.71712 3611.804923 2246.224134 2.015691807 1.91593718 2.305591023 2.518374266 2.448226535 2.102678653 1.823850848 2.220044315 1.607945025 1 11.13328618 -8.67819676 0.898838914 0.992253984 2.214329164 0.751048824 0.212498967 0.424528569 0.717336721 0.225372553 0.076971469 2.10E-09 8.67819676 1.22207518 S(ph)FDASDTLALPR ddPTM_A459_MK2206_30min_R1 2 SFDASDTLALPR 12 0 Q5JXC2 Q5JXC2 MIIP Migration and invasion-inhibitory protein 1 S(1)FDASDTLALPR;S(0.998)FDAS(0.002)DTLALPR 153.49 0.0010858 2270100 1477.05 1480.79 1519.62 1311.2 1550.48 1478.79 1710.44 1359.72 1412.48 1193.14 TRUE FALSE 1351.419141 1384.390302 1416.472428 1412.188851 1488.721098 1562.517812 1596.339668 1347.832111 1559.312351 1340.955191 1.007803356 1.032391173 1.056316004 1.053121581 1.110194515 1.165227461 1.190449673 1.005128375 1.162837029 1 10.38904531 -6.08301373 2.284499426 1.113261956 1.03125906 0.232385953 0.06068612 0.429745598 4.428138061 0.019226778 0.027920375 8.26E-07 6.08301373 -0.082002896 S(ph)FDASDTLALPR ddPTM_A459_MK2206_30min_R2 1 SFDASDTLALPR 12 0 Q5JXC2 Q5JXC2 MIIP Migration and invasion-inhibitory protein 1 S(1)FDASDTLALPR 131.79 0.0019749 2091800 5899 6798.9 6886.5 5943.3 6136.4 3807.4 4721.2 3224.9 5067.4 5432 TRUE FALSE 6350.631976 6461.276513 7116.092473 5457.713378 5895.454103 3952.293275 4101.300769 3646.405503 5508.153292 5254.754285 1.20854975 1.229605832 1.354219834 1.038623898 1.121927646 0.752136648 0.780493349 0.693925026 1.048222808 1 12.35940759 -6.407277038 1.689582613 0.83416917 1.244003755 0.630111801 0.127353784 0.217157374 1.23776753 0.046600011 0.055693286 3.91E-07 6.407277038 0.409834585 S(ph)FDDPIVQTER ddPTM_A459_MK2206_30min_R2 1 SFDDPIVQTER 11 0 D6RJ96;E9PDE8;O95757 D6RJ96 HSPA4L Heat shock 70 kDa protein 4L 1 S(1)FDDPIVQTER 123.28 0.0039093 1847100 13171 20453 15939 16529 19156 14989 14779 13364 18367 14741 TRUE FALSE 14179.38189 19437.33376 16470.3983 15178.52783 18403.83919 15559.4169 12838.49955 15110.72069 19964.52846 14260.00238 0.99434639 1.363066656 1.155006701 1.064412714 1.290591593 1.091123023 0.900315386 1.059657655 1.400036826 1 13.7996866 -6.962888913 24.96242836 1.08079454 1.178323706 0.066846434 0.153480935 447.2872123 300862.501 0.054074967 0.047689528 1.09E-07 6.962888913 0.097529166 S(ph)FDEQNVPK ddPTM_A459_MK2206_30min_R2 1 SFDEQNVPK 9 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 S(1)FDEQNVPK 94.82 0.022927 3265500 36459 35145 29096 24227 21749 20529 29504 29357 24054 24577 TRUE FALSE 39250.32907 33399.75041 30066.04612 22247.5766 20895.02498 21310.24548 25630.08936 33194.0607 26146.17344 23775.0545 1.650903853 1.404823295 1.264604719 0.935752917 0.878863389 0.896327934 1.078024421 1.396171802 1.099731378 1 14.53716103 -5.208455139 1.796254052 1.049111904 1.636887722 0.64932772 0.145347687 0.317533525 1.725588022 0.047542085 0.235539711 6.19E-06 5.208455139 0.587775818 S(ph)FDEVEGVFGR ddPTM_A459_MK2206_30min_R1 3 SFDEVEGVFGR 11 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JW88 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 S(1)FDEVEGVFGR;S(1)FDEVEGVFGR;S(1)FDEVEGVFGR 114.87 0.0063424 6636200 1840.09 1864.77 2008.17 1581.09 1409.39 1404.45 1529.75 993.57 1590.86 1832.22 TRUE FALSE 1683.580683 1743.373134 1871.861015 1702.865826 1353.251012 1483.968745 1427.703169 984.8833222 1756.23559 2059.209246 0.817586016 0.846622623 0.909019333 0.82695133 0.657170229 0.720649807 0.693325931 0.478282294 0.852868932 1 11.00787472 -6.13827091 5.163705227 0.70540511 0.858068239 0.144069715 0.129379797 0.333812524 12.69696065 0.036777933 0.048074975 7.27E-07 6.13827091 0.152663129 S(ph)FDEVEGVFGR ddPTM_A459_MK2206_30min_R2 3 SFDEVEGVFGR 11 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JW88 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 S(1)FDEVEGVFGR;S(1)FDEVEGVFGR;S(1)FDEVEGVFGR 158.34 0.00057195 3677100 12908.7 16137.5 14197 14498.6 11863 10517.1 13236.6 10811.6 9026.32 11645.75 TRUE FALSE 13897 15336.13522 14670.32089 13314.018 11397.19901 10917.33561 11498.61852 12224.71324 9811.412998 11265.75013 1.233561888 1.361306175 1.302205421 1.181813714 1.01166801 0.969073118 1.020670473 1.085121994 0.870906321 1 13.45965576 -6.083023096 2.344555176 0.994644 1.306209421 0.852417735 0.057945319 0.105309041 1.141847325 0.018137583 0.026226784 8.26E-07 6.083023096 0.311565421 S(ph)FDGNTLLNR ddPTM_A459_MK2206_30min_R1 1 SFDGNTLLNR 10 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 S(0.998)FDGNT(0.002)LLNR 100.04 0.017854 7189700 1746 2282.9 2327.8 1597.6 1660.4 1560.5 1657.8 1655.8 2093.6 2358.5 TRUE FALSE 1597.493531 2134.282795 2169.795422 1720.647429 1594.262752 1648.854161 1547.211187 1641.323515 2311.237212 2650.688786 0.602671102 0.805180452 0.818577961 0.649132195 0.601452257 0.622047435 0.583701563 0.619206421 0.871938352 1 11.37215158 -8.452175214 3.617595004 0.997503045 0.666798056 0.668139762 0.079314977 0.139472812 3.571507485 0.085983586 0.022705389 3.53E-09 8.452175214 -0.330704989 S(ph)FDGNTLLNR ddPTM_A459_MK2206_30min_R2 4 SFDGNTLLNR 10 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 S(1)FDGNTLLNR;S(1)FDGNTLLNR;S(1)FDGNTLLNR;S(1)FDGNTLLNR 198.97 0.00010432 33065300 45622.6 55922.7 38138.8 44185.8 42356.3 49700 60925 43858.2 49758.3 37606.1 TRUE FALSE 49115.50133 53145.66004 39410.32856 40575.6788 40693.17884 51591.36833 52925.47432 49590.61733 54086.18699 36379.01604 1.350105272 1.460887782 1.083325852 1.115359436 1.118589321 1.41816283 1.454835234 1.363165438 1.486741338 1 15.1508189 -6.776803229 24.9994135 1.374169716 1.224687543 0.100926212 0.166117899 471.3973202 767032.8233 0.059304813 0.052485334 1.67E-07 6.776803229 -0.149482173 S(ph)FDHLISDTK ddPTM_A459_MK2206_30min_R1 1 SFDHLISDTK 10 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 S(1)FDHLISDTK 78.705 0.03431 3622900 7866.7 4645.9 5095.3 5143.8 5952.7 4480.3 6482.4 6110.8 5973.9 6378.6 TRUE FALSE 7197.595855 4343.451066 4749.445232 5539.976367 5715.591354 4733.970714 6049.970924 6057.37392 6594.908283 7168.829124 1.004012752 0.605880122 0.662513383 0.772786779 0.797283804 0.660354799 0.843927344 0.844960009 0.919942179 1 12.80752179 -8.101275788 1.062716049 0.994010244 0.743118097 0.377579869 0.10452892 0.497178116 1.068270116 0.094715932 0.033200111 7.92E-09 8.101275788 -0.250892146 S(ph)FDHLISDTK ddPTM_A459_MK2206_30min_R2 1 SFDHLISDTK 10 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 S(1)FDHLISDTK 108.68 0.0069649 4155800 67880 58355 65569 65246 49888 48123 72147 47184 47810 68645 TRUE FALSE 73076.94499 55457.17556 67755.03773 59915.19309 47929.14645 49954.35449 62674.01224 53351.11081 51968.42738 66405.11927 1.100471557 0.83513404 1.02032853 0.902267683 0.721768848 0.752266618 0.943812961 0.803418643 0.782596703 1 16.01900684 -6.004002036 17.17129626 0.824323559 0.968796342 0.307095236 0.100442663 3.586297672 15401.1544 0.027642461 0.039442356 9.91E-07 6.004002036 0.144472783 S(ph)FDYNYR ddPTM_A459_MK2206_30min_R1 7 SFDYNYR 7 0 O75494-2;O75494;Q5JRI1;O75494-5;O75494-4;O75494-6;O75494-3 O75494-2;O75494-6 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.988)FDYNY(0.012)R;S(0.999)FDYNYR;S(0.97)FDY(0.027)NY(0.004)R;S(0.999)FDY(0.001)NYR;S(0.996)FDY(0.003)NYR;S(0.975)FDY(0.009)NY(0.015)R;S(0.768)FDY(0.202)NY(0.03)R 125.71 0.0059534 905963400 22420.7 22893.8 23027.4 16836.7 18854.2 18862.3 25049.4 18049 24275.1 29258.8 TRUE FALSE 20513.70173 21403.40946 21464.36425 18133.46555 18103.19729 19930.26713 23378.40023 17891.1995 26798.58351 32883.60104 0.623827716 0.65088399 0.652737643 0.551444032 0.550523566 0.606085298 0.710944042 0.54407665 0.814952824 1 15.00508067 -8.506954062 3.556346429 0.999114435 0.613810323 0.857080837 0.051092527 0.070462649 2.256211508 0.050717719 0.0133803 3.11E-09 8.506954062 -0.385304112 S(ph)FDYNYR ddPTM_A459_MK2206_30min_R2 6 SFDYNYR 7 0 O75494-2;O75494;Q5JRI1;O75494-5;O75494-4;O75494-6;O75494-3 O75494-2;O75494-6 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.994)FDY(0.005)NY(0.001)R;S(0.999)FDYNY(0.001)R;S(0.999)FDY(0.001)NYR;S(0.994)FDY(0.002)NY(0.004)R;S(0.939)FDY(0.02)NY(0.041)R;S(0.861)FDY(0.048)NY(0.091)R 104.42 0.017999 1449917000 595602 458105 485688 459838 399493 385220 540376 385020 315197 530426 TRUE FALSE 641201.7471 435356.1718 501880.5955 422267.7645 383806.8975 399879.817 469423.9821 435343.436 342612.2653 513118.2431 1.249617911 0.848451946 0.978099302 0.822944361 0.747989187 0.779313194 0.91484563 0.848427125 0.667706264 1 18.96893179 -2.243474928 1.177266298 0.827911507 200 0.59803238 0.098098749 486.2587773 1.879728646 0.028449258 260128.3835 0.00570854 2.243474928 199.1720885 S(ph)FDYNYRR ddPTM_A459_MK2206_30min_R1 1 SFDYNYRR 8 1 O75494-2;O75494;Q5JRI1;O75494-5;O75494-4;O75494-6;O75494-3 O75494-2;O75494-6 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.953)FDYNY(0.047)RR 77.288 0.027596 13117000 6292.9 4866.3 5213.3 5249.1 7294.7 4987.7 4821.7 6352 2790.7 1831.1 TRUE FALSE 5757.65581 4549.502986 4859.435721 5653.386592 7004.136652 5270.099264 4500.053191 6296.465134 3080.803252 2057.950492 2.797762061 2.210696031 2.361298651 2.747095527 3.403452454 2.560848419 2.18666737 3.05958047 1.497024959 1 11.00699256 -8.424617343 4.254251523 1.014243829 2.645270916 0.719780463 0.359092271 0.113065485 3.309684921 0.361138623 0.094634544 3.76E-09 8.424617343 1.631027087 S(ph)FDYNYRR ddPTM_A459_MK2206_30min_R2 1 SFDYNYRR 8 1 O75494-2;O75494;Q5JRI1;O75494-5;O75494-4;O75494-6;O75494-3 O75494-2;O75494-6 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.989)FDYNY(0.01)RR 70.808 0.036118 30702000 36318 117980 78753 112370 149150 126820 100840 63232 158950 67826 TRUE FALSE 39098.534 112121.2848 81378.58571 103189.0115 143293.6216 131646.224 87599.58687 71496.63951 172775.1837 65612.84317 0.595897573 1.708831371 1.240284398 1.572695322 2.183926418 2.00640938 1.33509817 1.089674461 2.633252506 1 16.00169062 -4.759391488 24.51601809 1.648081448 0.595895831 0.291261422 0.489034705 54.40964747 651143.2906 0.118899606 0.755396523 1.74E-05 4.759391488 -1.052185617 S(ph)FEAEINYNNPLGTGGR ddPTM_A459_MK2206_30min_R1 1 SFEAEINYNNPLGTGGR 17 0 O94966-2;O94966-7;O94966-6;O94966-5;E7ESU0;O94966-4;O94966-3;O94966 O94966-2 USP19 Ubiquitin carboxyl-terminal hydrolase 19;Ubiquitin carboxyl-terminal hydrolase 1 S(1)FEAEINYNNPLGTGGR 67.648 0.038379 3364400 793.93 973.01 833.82 666.28 728.56 684.93 833.29 707.21 968.88 1163.7 TRUE FALSE 726.4020844 909.6668721 777.2226216 717.597001 699.5399124 723.7101447 777.7027445 701.0269375 1069.598543 1307.867941 0.555409351 0.695534192 0.594266896 0.548676956 0.534870449 0.553351085 0.594633999 0.536007433 0.817818458 1 10.35300116 -8.474173956 3.157937649 0.998137413 0.578862139 0.900092005 0.046155563 0.066189306 1.442237743 0.047300468 0.012599623 3.36E-09 8.474173956 -0.419275274 S(ph)FEDLTDHPVTR ddPTM_A459_MK2206_30min_R1 2 SFEDLTDHPVTR 12 0 P78536 P78536 ADAM17 Disintegrin and metalloproteinase domain-containing protein 17 1 S(1)FEDLTDHPVTR;S(1)FEDLTDHPVTR 184 3.47E-13 3312100 2774.7 2507.3 2343.5 2341.47 2867.4 2811.1 3339.7 2931.2 2962.1 2484.4 TRUE FALSE 2538.697194 2344.074314 2184.429749 2521.810425 2753.185386 2970.262053 3116.914707 2905.572827 3270.020895 2792.186228 0.909214854 0.839512168 0.782336696 0.903166988 0.986032149 1.063776485 1.116299004 1.040608538 1.171132807 1 11.44717945 -6.407353894 1.804768027 1.085546926 0.843509046 0.800558544 0.05207008 0.142567055 0.923186208 0.018602512 0.022055222 3.91E-07 6.407353894 -0.24203788 S(ph)FEDLTDHPVTR ddPTM_A459_MK2206_30min_R2 2 SFEDLTDHPVTR 12 0 P78536 P78536 ADAM17 Disintegrin and metalloproteinase domain-containing protein 17 1 S(1)FEDLTDHPVTR;S(1)FEDLTDHPVTR 163.62 0.00031925 8287600 40611 24908 20148.5 24762 20688.2 31022 45443 23703 38608 24797 TRUE FALSE 43720.20938 23671.10494 20820.24093 22738.86539 19875.87732 32202.56395 39476.27951 26801.06348 41966.05405 23987.87592 1.822596112 0.986794538 0.8679485 0.947931591 0.828580129 1.342451664 1.645676326 1.117275392 1.749469365 1 14.5500178 -6.922287426 8.742889638 1.402873189 1.065432619 0.147034295 0.333376338 0.483284625 49.09433114 0.115913419 0.102216573 1.20E-07 6.922287426 -0.33744057 S(ph)FEEEGEHLGSR ddPTM_A459_MK2206_30min_R1 1 SFEEEGEHLGSR 12 0 Q9BXW6-4;Q9BXW6 Q9BXW6-4 OSBPL1A Oxysterol-binding protein-related protein 1 1 S(1)FEEEGEHLGSR 135.94 0.0014486 4993500 443.69 382.88 560.13 582.54 558.99 567.48 726.99 526.35 407.68 518.48 TRUE FALSE 405.9518356 357.9544424 522.1099362 627.4073317 536.7242446 599.6102272 678.4938236 521.7481774 450.0597949 582.7132167 0.69665802 0.614289211 0.895998102 1.076700019 0.921077863 1.028997129 1.164370061 0.895377284 0.772352131 1 9.186642223 -5.383498879 4.047147202 0.983026565 0.656496082 0.608096682 0.102307311 0.150519591 4.152818693 0.028690832 0.064262749 4.14E-06 5.383498879 -0.326530483 S(ph)FEEEGEHLGSR ddPTM_A459_MK2206_30min_R2 2 SFEEEGEHLGSR 12 0 Q9BXW6-4;Q9BXW6 Q9BXW6-4 OSBPL1A Oxysterol-binding protein-related protein 1 1 S(1)FEEEGEHLGSR;S(1)FEEEGEHLGSR 118.52 0.0024329 0 16208.4 25512 18880.7 27780 28963 32460 36791 30758 35384 42493 TRUE FALSE 17449.32757 24245.11118 19510.17311 25510.28514 27825.76709 33695.28805 31960.29751 34778.17621 38461.63636 41106.45689 0.42449116 0.589812721 0.474625511 0.620590707 0.676919618 0.819707914 0.777500663 0.84605142 0.935659244 1 15.32707741 -6.576957524 0.38957434 1.00417817 0.381019804 0.929339349 0.048299472 0.404922867 0.119707542 0.049998437 0.101245779 2.65E-07 6.576957524 -0.623158366 down S(ph)FEEKVENLK ddPTM_A459_MK2206_30min_R1 2 SFEEKVENLK 10 1 H0YC42;P55327-2;P55327;P55327-3;P55327-4;P55327-7;P55327-5;P55327-6;E5RK35 H0YC42 TPD52 Tumor protein D52 1 S(1)FEEKVENLK;S(1)FEEKVENLK 126.83 0.016091 49276000 4038.2 3637.6 3180.7 3271.9 2333.9 2672.8 2289.7 2243.7 2479.2 2210.6 TRUE FALSE 3694.729885 3400.791579 2964.802946 3523.902305 2240.935821 2824.131626 2136.958291 2224.083567 2736.921712 2484.465817 1.487132509 1.368822044 1.193336179 1.418374236 0.901978931 1.136715831 0.86012787 0.895195882 1.101613753 1 11.27871998 -6.260213803 24.99997613 0.978946813 1.354653806 0.754246586 0.107365143 56.06103825 1143561.04 0.032520588 0.039660896 5.49E-07 6.260213803 0.375706993 S(ph)FEEKVENLK ddPTM_A459_MK2206_30min_R2 3 SFEEKVENLK 10 1 H0YC42;P55327-2;P55327;P55327-3;P55327-4;P55327-7;P55327-5;P55327-6;E5RK35 H0YC42 TPD52 Tumor protein D52 1 S(1)FEEKVENLK;S(1)FEEKVENLK;S(1)FEEKVENLK 122.39 0.021263 53771000 55352 65215 48433 42557.5 39124.9 30290.9 60985 47204.1 46691 29130.4 TRUE FALSE 59589.79168 61976.51793 50047.73205 39080.41612 37588.65984 31443.64143 52977.59624 53373.83795 50752.09878 28179.87743 2.114622103 2.199318222 1.776009572 1.386819947 1.333883014 1.115818956 1.879979655 1.894040812 1.801004951 1 14.78237772 -5.447904393 3.401781945 1.520320464 2.153970809 0.454316649 0.290433183 0.243595245 5.39104847 0.085073165 0.190708286 3.57E-06 5.447904393 0.633650346 S(ph)FEMTEFNQALEEIK ddPTM_A459_MK2206_30min_R1 1 SFEMTEFNQALEEIK 15 0 Q9BVS4-2;Q9BVS4;H0Y919 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 S(1)FEMTEFNQALEEIK 169.72 5.74E-05 9995100 4226.3 4352 4020.2 2969.4 3626.6 3197.8 4064.1 3506.2 4497.6 4580.7 TRUE FALSE 3866.830992 4068.684009 3747.320025 3198.103703 3482.144843 3378.856673 3792.991304 3475.545663 4965.141615 5148.191699 0.751104702 0.79031323 0.727890538 0.621209133 0.676382125 0.656319125 0.736761863 0.675100281 0.96444381 1 12.32985006 -8.288764077 6.564623091 0.986881902 0.703692953 0.845135993 0.047579239 0.080432755 12.66949952 0.047356673 0.013182189 5.14E-09 8.288764077 -0.283188949 S(ph)FEMTEFNQALEEIK ddPTM_A459_MK2206_30min_R2 3 SFEMTEFNQALEEIK 15 0 Q9BVS4-2;Q9BVS4;H0Y919 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 S(0.999)FEMT(0.001)EFNQALEEIK;S(0.999)FEMT(0.001)EFNQALEEIK;S(1)FEMTEFNQALEEIK 145.82 0.00035543 6930160 34253 23153 26083.9 24410.47 19504.7 17745.86 29271 21819.73 15982.2 38200.87 TRUE FALSE 36875.43602 22003.25569 26953.52421 22416.05652 18738.84747 18421.19114 25427.68254 24671.64363 17372.30287 36954.37874 0.997863779 0.595416739 0.729372949 0.606587292 0.507080571 0.498484666 0.688083074 0.667624365 0.470101337 1 15.1734577 -9.858553683 11.98520737 0.999999467 0.634546031 0.357484202 0.144591601 0 0 0.138494046 0.03358974 1.38E-10 9.858553683 -0.365453436 S(ph)FEVEEVETPNSTPPR ddPTM_A459_MK2206_30min_R1 5 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 Sep-09 Septin-9 1 S(1)FEVEEVETPNSTPPR;S(1)FEVEEVETPNSTPPR;S(1)FEVEEVETPNSTPPR;S(1)FEVEEVETPNSTPPR;S(1)FEVEEVETPNSTPPR 285.18 3.60E-63 157896400 6824.06 4856.86 5372.81 4870.28 5180.22 5444.08 4581.02 4374.69 3668.88 3849.27 TRUE FALSE 6243.637862 4540.677531 5008.118627 5245.389809 4973.880868 5752.319105 4275.428514 4336.442547 4050.273205 4326.146628 1.443233066 1.049589374 1.157639594 1.212485443 1.149725448 1.329663463 0.988276377 1.002379928 0.936231144 1 12.07886685 -7.285746096 22.60523728 0.981920011 1.208929475 0.572709795 0.101924446 181.6053259 168891.1641 0.041209201 0.027808926 5.18E-08 7.285746096 0.227009464 S(ph)FEVEEVETPNSTPPR ddPTM_A459_MK2206_30min_R2 4 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 Sep-09 Septin-9 1 S(1)FEVEEVETPNSTPPR;S(1)FEVEEVETPNSTPPR;S(1)FEVEEVETPNSTPPR;S(1)FEVEEVETPNSTPPR 293.77 6.07E-75 185566000 70752 107936 81407.8 94961 62754 92890.5 90736 75467 83424.7 62186.7 TRUE FALSE 76168.82752 102576.0552 84121.89542 87202.38253 60289.96265 96425.51307 78822.25421 85330.79602 90680.82961 60157.55307 1.26615568 1.705123463 1.398359659 1.449566648 1.002201047 1.602882899 1.310263636 1.418455234 1.507388931 1 15.87645827 -10.96455333 4.145366384 0.998022699 1.407883652 0.309305036 0.182321779 129943220.4 6234.167973 2452463.989 0.042830976 1.09E-11 10.96455333 0.409860954 S(ph)FEVEEVETPNSTPPRR ddPTM_A459_MK2206_30min_R2 3 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 Sep-09 Septin-9 1 S(0.929)FEVEEVET(0.034)PNS(0.034)T(0.003)PPRR;S(1)FEVEEVETPNSTPPRR;S(1)FEVEEVETPNSTPPRR 161.08 4.10E-05 20614900 30901.3 56318 47894.7 41919.9 38882 39309.7 38787.1 33792.6 41968.1 31726.8 TRUE FALSE 33267.12729 53521.33001 49491.48539 38494.91007 37355.29731 40805.65818 33694.30718 38209.40885 45618.40948 30691.55711 1.083917872 1.743845378 1.612543971 1.2542508 1.217119652 1.329540174 1.097836355 1.244948528 1.486350442 1 14.90555422 -5.780814593 21.71974022 1.240815498 1.506476434 0.242301756 0.1983693 65.63991767 73582.45299 0.054243141 0.080693532 1.66E-06 5.780814593 0.265660937 S(ph)FEVVR ddPTM_A459_MK2206_30min_R2 2 SFEVVR 6 0 Q9UKY7;D6R9V8;H0Y8K3 Q9UKY7 CDV3 Protein CDV3 homolog 1 S(1)FEVVR;S(1)FEVVR 103.74 0.027267 7801400 63776 42169 46186 59037 41960 35824 53074 38172 30640.7 52482 TRUE FALSE 68658.7396 40074.94878 47725.81819 54213.48825 40312.43957 37187.30742 46105.32005 43161.21146 33305.7727 50769.51664 1.352361498 0.789350607 0.940048701 1.067835423 0.79402843 0.732473143 0.908129978 0.850140287 0.656019102 1 15.6316749 -4.756451987 24.9929815 0.859585392 1.352362257 0.611336983 0.117826959 107.7262936 539779.6953 0.029867683 0.241803121 1.75E-05 4.756451987 0.492776865 S(ph)FGHFPGPEFLDVEK ddPTM_A459_MK2206_30min_R1 1 SFGHFPGPEFLDVEK 15 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 S(1)FGHFPGPEFLDVEK 105.02 0.0031975 5023900 3049.5 2876.3 2807.7 2641.7 2644.7 2412.4 2583.5 2574.5 2702 2967.6 TRUE FALSE 2790.124011 2689.052347 2617.121147 2845.164192 2539.355999 2548.988003 2411.159429 2551.991418 2982.882569 3335.248692 0.836556512 0.806252425 0.784685458 0.853059083 0.761369311 0.764257253 0.722932426 0.76515776 0.89435087 1 11.70357862 -8.508976285 3.252474881 0.999177552 0.786248712 0.778839158 0.036334168 0.104787464 2.733483801 0.038223357 0.010143049 3.10E-09 8.508976285 -0.21292884 S(ph)FGHFPGPEFLDVEK ddPTM_A459_MK2206_30min_R2 3 SFGHFPGPEFLDVEK 15 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 S(1)FGHFPGPEFLDVEK;S(1)FGHFPGPEFLDVEK;S(1)FGHFPGPEFLDVEK 116.51 0.0014875 4076500 44810 44718 40528 41282 32381.1 32703.2 43730 32449.4 29261.9 35956 TRUE FALSE 48240.68805 42497.36915 41879.18329 37909.12855 31109.65531 33947.74319 37988.19847 36690.648 31807.04717 34782.75866 1.386913802 1.221794095 1.204021328 1.089882747 0.894398734 0.975993409 1.092155997 1.054851582 0.914448663 1 15.08608474 -5.504235218 1.303727051 0.99540578 1.350016464 0.795789356 0.065410315 0.255943304 0.778908043 0.022697894 0.085151594 3.13E-06 5.504235218 0.354610683 S(ph)FHIENK ddPTM_A459_MK2206_30min_R2 2 SFHIENK 7 0 A0A1B0GTU3;Q96L93-5;Q96L93-6;Q96L93-4;Q96L93;Q96L93-2;H0Y534 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 1 S(1)FHIENK;S(1)FHIENK 84.615 0.024673 4576100 51939 68473 59762 68057 58364 57640 63200 47356 58811 58795 TRUE FALSE 55915.48977 65072.73039 61754.43525 62496.5254 56072.3361 59833.53059 54901.76408 53545.5918 63926.27447 56876.52397 0.983103148 1.144105263 1.085763175 1.098810564 0.985860812 1.051989932 0.965279877 0.941435729 1.123948336 1 15.79554568 -6.25827657 24.84977026 1.008212479 1.083229637 0.22417034 0.060134 357.7016443 2810413.295 0.017506877 0.021646788 5.52E-07 6.25827657 0.075017157 S(ph)FLEDTTPAR ddPTM_A459_MK2206_30min_R1 1 SFLEDTTPAR 10 0 Q3YEC7;Q3YEC7-2;G3V154;F2Z2T0 Q3YEC7 RABL6 Rab-like protein 6 1 S(0.996)FLEDT(0.004)TPAR 107.34 0.011348 26481000 1540.3 1388.3 1380 1333.8 1154.9 1294.7 1857.1 1265.3 1764.4 1973.4 TRUE FALSE 1409.289397 1297.921418 1286.329445 1436.529507 1108.897887 1368.004795 1733.216247 1254.237615 1947.815694 2217.87969 0.635421931 0.585208216 0.579981615 0.647703982 0.499981082 0.616807486 0.781474421 0.565512016 0.878233252 1 11.11496539 -8.485069969 0.981570023 1.007491891 0.598969081 0.742198506 0.075908827 0.278811082 0.593071868 0.070150215 0.023656801 3.27E-09 8.485069969 -0.408522811 S(ph)FLEDTTPAR ddPTM_A459_MK2206_30min_R2 3 SFLEDTTPAR 10 0 Q3YEC7;Q3YEC7-2;G3V154;F2Z2T0 Q3YEC7 RABL6 Rab-like protein 6 1 S(1)FLEDTTPAR;S(1)FLEDTTPAR;S(1)FLEDTTPAR 118.77 0.0056095 72001500 69098 62734 62526 60027 59191 61038 66913 51292 41136 67432 TRUE FALSE 74388.19601 59618.72078 64610.58563 55122.60208 56866.86393 63360.84386 58127.24272 57996.04051 44713.93492 65231.69936 1.14036882 0.913953206 0.990478345 0.845027841 0.871767323 0.971319841 0.891088892 0.889077566 0.685463285 1 15.99328559 -1.522879844 0.888316619 0.881009024 115.0019388 0.428931683 0.08527808 812.350466 1.888431815 0.028041077 187813.8936 0.029999924 1.522879844 114.1209297 S(ph)FLESNYFTKPNLK ddPTM_A459_MK2206_30min_R1 1 SFLESNYFTKPNLK 14 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 S(1)FLESNYFTKPNLK 80.508 0.018604 10731000 2420.8 2681.4 2608 2234.1 2152.7 2341.1 2440.3 2589 3475.5 2755.4 TRUE FALSE 2214.898248 2506.840373 2430.976226 2406.170769 2066.953401 2473.651059 2277.51204 2566.364646 3836.790662 3096.759754 0.715230894 0.809504311 0.7850064 0.776996267 0.667456814 0.798786879 0.735450025 0.828725781 1.238969428 1 11.59654375 -8.131669836 5.061128729 1.114544777 0.759423986 0.818070607 0.067521843 0.080924335 2.904323696 0.044962615 0.01619391 7.38E-09 8.131669836 -0.355120792 S(ph)FLNYYADLETSAR ddPTM_A459_MK2206_30min_R1 2 SFLNYYADLETSAR 14 0 Q92870-2;H0YAJ5;G5E9Y1;Q92870;Q92870-4 Q92870-2 APBB2 Amyloid beta A4 precursor protein-binding family B member 2 1 S(1)FLNYYADLETSAR;S(1)FLNYYADLETSAR 108.77 0.0067452 0 373.78 486.88 767.62 444.86 485.26 529.21 581.46 418.91 579.28 414.78 TRUE FALSE 341.9880482 455.1840235 715.5160931 479.1231943 465.9310666 559.1734129 542.6718643 415.247514 639.498229 466.1660778 0.733618477 0.976441756 1.534895238 1.027795065 0.999495864 1.199515451 1.164117018 0.890771624 1.371824891 1 8.864700215 -4.995067734 9.781122346 1.145252675 0.792833381 0.331030689 0.181898831 0.150625823 195.6899578 0.044213195 0.155436148 1.01E-05 4.995067734 -0.352419293 S(ph)FMHVNTNANFYK ddPTM_A459_MK2206_30min_R1 1 SFMHVNTNANFYK 13 0 K7ES89;P51452-2;P51452 K7ES89 DUSP3 Dual specificity protein phosphatase 3 1 S(0.868)FMHVNT(0.132)NANFYK 100.25 0.011085 5269200 2632.1 2464.5 2565.2 2082.6 2175.8 2060.7 2294.5 2631.5 2372.5 2111.8 TRUE FALSE 2408.226073 2304.060602 2391.081371 2243.002213 2089.133279 2177.375053 2141.438092 2608.493073 2619.129865 2373.425727 1.014662496 0.970774259 1.007438886 0.945048411 0.880218519 0.917397595 0.902256206 1.099041374 1.103522994 1 11.21275519 -7.767485244 24.99976814 1.07596167 0.947471797 0.561107612 0.048160069 109.8220549 454106.2488 0.027384186 0.013686366 1.71E-08 7.767485244 -0.128489872 S(ph)FNDFR ddPTM_A459_MK2206_30min_R1 1 SFNDFR 6 0 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 S(1)FNDFR 111.06 0.025268 8912600 8249.4 9353.8 8873 7604.2 8894.5 9338.9 9448.5 8690.3 8757.3 9428 TRUE FALSE 7547.745211 8744.86592 8270.725482 8189.876802 8540.213231 9867.660447 8818.207805 8614.321623 9667.652673 10596.01182 0.712319441 0.825297864 0.780550798 0.772920693 0.80598374 0.931261744 0.832219514 0.812977729 0.912385984 1 13.37123374 -14.52287674 0.031947709 2.070866981 0.127777055 0.703911603 0.044088364 761.840063 1.823050602 89.05765709 33.94445573 3.00E-15 14.52287674 -1.943089926 S(ph)FNDFR ddPTM_A459_MK2206_30min_R2 1 SFNDFR 6 0 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 S(1)FNDFR 101.46 0.030433 11800000 112160 128580 116990 134850 129230 127040 149250 111900 144550 117360 TRUE FALSE 120747.0558 122194.9042 120890.3882 123832.3236 124155.7809 131874.5962 129653.2957 126525.7142 157122.6977 113530.5528 1.063564414 1.076317354 1.064826914 1.090740075 1.093589151 1.161578033 1.14201237 1.114464002 1.383968402 1 16.79272108 -6.754940062 1.126613158 1.176843649 1.068575769 0.173149573 0.089096982 0.784230535 2.113621593 0.044900343 0.040794592 1.76E-07 6.754940062 -0.10826788 S(ph)FNRDR ddPTM_A459_MK2206_30min_R2 1 SFNRDR 6 1 Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;Q96L91-4 Q96L91-3 EP400 E1A-binding protein p400 1 S(1)FNRDR 64.563 0.047594 3004100 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 S(ph)FNTSESK ddPTM_A459_MK2206_30min_R2 2 SFNTSESK 8 0 F5H7T0;F6RJM5;Q96S38-2;Q96S38;A0A087X1U5 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 S(0.999)FNT(0.001)S(0.001)ESK;S(0.999)FNTSESK 104.82 0.014415 17562400 79441 72760 72163 71456 61767 66933 76185 70655 51730 92725 TRUE FALSE 85523.06404 69146.8442 74568.8784 65617.81622 59341.71723 69480.18222 66181.81799 79889.85109 56229.38189 89699.39084 0.953440857 0.770873063 0.831319786 0.731530232 0.661562098 0.774589231 0.73781792 0.89063984 0.626864702 1 16.45281057 S(ph)FQDYTGQK ddPTM_A459_MK2206_30min_R2 2 SFQDYTGQK 9 0 A0A087WXU5;A0A087WYV3;A0A0D9SEW3;A0A087WXF8;Q9NP64-2;Q9NP64-3;Q9NP64 A0A087WXU5 ZCCHC17 Nucleolar protein of 40 kDa 1 S(0.993)FQDYT(0.007)GQK;S(0.989)FQDY(0.011)TGQK 105.95 0.01345 4725800 93122 77276 83421 76366 71984 75674 88560 72309 69097 97705 TRUE FALSE 100251.4919 73438.58621 86202.2145 70126.65352 69157.54647 78553.8271 76931.96562 81760.03457 75106.93216 94516.89385 1.060672731 0.776988993 0.912029702 0.741948351 0.731695083 0.831108852 0.813949364 0.865030909 0.794640292 1 16.5282846 -4.754827373 24.94614246 0.821810524 1.060673145 0.445096436 0.076911127 191.0367528 720686.5192 0.018117172 0.169713811 1.76E-05 4.754827373 0.238862621 S(ph)FQSLACSPGLPAADR ddPTM_A459_MK2206_30min_R1 1 SFQSLACSPGLPAADR 16 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;C9J0X3;C9K0F0;A0A087WXJ0 Q96JY6;A0A087WXJ0 PDLIM2 PDZ and LIM domain protein 2 1 S(0.491)FQS(0.209)LACS(0.3)PGLPAADR 163.34 3.27E-05 7982600 669.04 793.44 768.75 685.65 739.78 676.2 606.23 445.82 591.69 452.47 TRUE FALSE 612.1346347 741.7869118 716.5693919 738.4588818 710.3129961 714.4858596 565.7895028 441.9222427 653.1982929 508.5253996 1.203744464 1.458701792 1.409112293 1.452157321 1.396809278 1.405015089 1.112608148 0.869026883 1.284494921 1 8.990176025 -7.317668964 4.408884334 1.047607617 1.395937685 0.646638445 0.116536384 0.128124633 5.241362923 0.047621331 0.031916088 4.81E-08 7.317668964 0.348330067 S(ph)FSADGFEMLQNPVK ddPTM_A459_MK2206_30min_R1 1 SFSADGFEMLQNPVK 15 0 Q9HCM1 Q9HCM1 KIAA1551 Uncharacterized protein KIAA1551 1 S(0.868)FS(0.132)ADGFEMLQNPVK 102.63 0.0061729 3351300 743.4 858.52 878.85 651.81 675.24 637.2 665.56 811.37 807.42 517.17 TRUE FALSE 680.1699263 802.630192 819.1961106 702.0125191 648.343761 673.2777133 621.1617068 804.2762776 891.3541984 581.240924 1.170203092 1.380890709 1.40939166 1.207782333 1.115447544 1.158345336 1.068681989 1.383722729 1.533536545 1 9.182992474 -5.791341906 24.42989203 1.213697726 1.326234733 0.094048169 0.156493409 397.9390186 325108.1051 0.046360207 0.068774871 1.62E-06 5.791341906 0.112537006 S(ph)FSADNFIGIQR ddPTM_A459_MK2206_30min_R1 2 SFSADNFIGIQR 12 0 Q8N7R7-3;Q8N7R7-2;Q8N7R7 Q8N7R7-3 CCNYL1 Cyclin-Y-like protein 1 1 S(0.738)FS(0.262)ADNFIGIQR;S(0.847)FS(0.153)ADNFIGIQR 175.6 0.00010345 54331000 2164.78 2538.72 1760.67 1893.11 2292.84 2639.44 2815.7 2534.1 2791.05 2735.1 TRUE FALSE 1980.654093 2373.448867 1641.160626 2038.91766 2201.511328 2788.882812 2627.869791 2511.944631 3081.189635 3073.944837 0.644336251 0.772118236 0.533893974 0.663290257 0.716184396 0.907265081 0.854885149 0.81717297 1.002356841 1 11.58587556 -6.667413309 3.073980202 0.903444329 0.655247649 0.731798509 0.076203236 0.142998363 2.711184691 0.02705637 0.026533729 2.15E-07 6.667413309 -0.248196679 S(ph)FSEDTLMDGPAR ddPTM_A459_MK2206_30min_R1 4 SFSEDTLMDGPAR 13 0 Q9BRG2;M0QZQ6 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 S(0.966)FSEDT(0.033)LMDGPAR;S(1)FSEDTLMDGPAR;S(0.998)FS(0.001)EDTLMDGPAR;S(0.991)FS(0.004)EDT(0.005)LMDGPAR 282.12 1.09E-48 25591000 3216.97 3706.13 3575.35 2829.01 4009.26 3825.78 3694.57 3358.46 2930.74 3035.57 TRUE FALSE 2943.349809 3464.860263 3332.665203 3046.90084 3849.562684 4042.392357 3448.111976 3329.097338 3235.400911 3411.639329 0.862737683 1.015599813 0.976851561 0.893089962 1.128361563 1.184882682 1.010690652 0.975805769 0.948342014 1 11.73624942 -4.76079036 7.087183332 1.01802709 0.8595311 0.243760998 0.080210405 0.177310516 53.15037705 0.021983915 0.134566147 1.73E-05 4.76079036 -0.15849599 S(ph)FSEDTLMDGPAR ddPTM_A459_MK2206_30min_R2 2 SFSEDTLMDGPAR 13 0 Q9BRG2;M0QZQ6 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 S(1)FSEDTLMDGPAR;S(0.922)FS(0.041)EDT(0.037)LMDGPAR 182.72 0.00011855 8094400 23320.4 25410.2 27244.6 27434.9 29696 30851.9 28930 24173.8 24900 28511.5 TRUE FALSE 25105.82775 24148.36642 28152.92137 25193.38091 28529.98583 32025.99067 25131.45625 27333.39866 27065.75699 27581.17209 0.910252388 0.875538079 1.020729695 0.913426769 1.034400777 1.161154086 0.91118159 0.991016574 0.981312792 1 14.75139615 -5.336980049 1.384027532 1.007621127 0.881957569 0.258360429 0.068301871 0.813268462 2.560639799 0.02192932 0.106890947 4.60E-06 5.336980049 -0.125663558 S(ph)FSEDVISHK ddPTM_A459_MK2206_30min_R1 1 SFSEDVISHK 10 0 F8W9J4;Q03001;E9PHM6;F6QMI7;Q03001-8;Q03001-14;H0YC82;Q03001-10;A0A494C1D7 F8W9J4;A0A494C1D7 DST Dystonin 1 S(0.686)FS(0.314)EDVISHK 99.732 0.012026 7877100 6383 6810.3 6401.6 6285.6 6499.5 6035.3 6790.6 6305.5 6817.7 6085.3 TRUE FALSE 5840.092332 6366.948232 5967.077228 6769.718001 6240.611152 6377.01347 6337.611464 6250.371678 7526.424312 6839.192906 0.853915427 0.930950233 0.872482661 0.989841652 0.91247772 0.932421933 0.926660726 0.913904866 1.100484285 1 12.73961037 -8.248895302 24.92598017 1.05024214 0.918760014 0.628016919 0.041119669 385.4949404 766010.4238 0.0266044 0.009894397 5.64E-09 8.248895302 -0.131482125 S(ph)FSEDVISHK ddPTM_A459_MK2206_30min_R2 1 SFSEDVISHK 10 0 F8W9J4;Q03001;E9PHM6;F6QMI7;Q03001-8;Q03001-14;H0YC82;Q03001-10;A0A494C1D7 F8W9J4;A0A494C1D7 DST Dystonin 1 S(0.859)FS(0.141)EDVISHK 106.26 0.0079448 5088800 52498 55019 58201 65350 60430 61818 56049 51903 65997 53831 TRUE FALSE 56517.28724 52286.83647 60141.39229 60010.69596 58057.21456 64170.52731 48689.69897 58686.90031 71737.29976 52074.49888 1.085316008 1.004077573 1.15491063 1.152400834 1.114887629 1.232283146 0.935000817 1.126979646 1.377589824 1 15.66828943 -5.270526566 24.23375829 1.137275347 1.04469679 0.093798839 0.114448188 931.7706498 2484858.766 0.029557321 0.063030802 5.36E-06 5.270526566 -0.092578558 S(ph)FSEHDLAQLR ddPTM_A459_MK2206_30min_R2 1 SFSEHDLAQLR 11 0 Q8WWL2-4;Q8WWL2-3;Q8WWL2-2;Q8WWL2 Q8WWL2-4 SPIRE2 Protein spire homolog 2 1 S(0.873)FS(0.127)EHDLAQLR 71.558 0.041725 1733800 7548.3 7144.3 8026.2 8656.8 11550 14079 15709 11754 10730 13234 TRUE FALSE 8126.203652 6789.524451 8293.789502 7949.511748 11096.48897 14614.78621 13646.38943 13290.28816 11663.276 12802.17566 0.634751769 0.530341454 0.647842189 0.62095006 0.866765873 1.141586133 1.065942992 1.038127308 0.911038585 1 13.64410139 -6.405121088 2.904249435 1.03533845 0.602004941 0.907933188 0.063300014 0.075076335 1.218719113 0.02169272 0.024801889 3.93E-07 6.405121088 -0.43333351 S(ph)FSEPFGR ddPTM_A459_MK2206_30min_R2 1 SFSEPFGR 8 0 A0A494C127;A0A494C1S3;A0A494C175;A0A0S2Z4A4;A0A494C1P6;P58340-2;P58340-5;P58340-4;P58340;P58340-3 A0A494C127 MLF1 Myeloid leukemia factor 1 1 S(0.995)FS(0.005)EPFGR 81.525 0.043521 1333800 7091.8 8093.6 7233.9 8529.2 7360.2 11430 7741.5 6986.8 8832.3 11749 TRUE FALSE 7634.753661 7691.683593 7475.074616 7832.337076 7071.201566 11864.97666 6725.031751 7899.998749 9600.517489 11365.63109 0.671740407 0.676749362 0.657691118 0.689124696 0.622156527 1.043934698 0.59169893 0.695077879 0.844697264 1 13.47239017 -14.52287874 0.135158507 1.976308855 0.609235828 0.375746133 0.118776805 157.357741 1.317150296 41.22072883 0.809029879 3.00E-15 14.52287874 -1.367073027 S(ph)FSGLIK ddPTM_A459_MK2206_30min_R2 1 SFSGLIK 7 0 Q14CB8-4;Q14CB8-6;Q14CB8-7;Q14CB8-3;Q14CB8;Q14CB8-2 Q14CB8-4 ARHGAP19 Rho GTPase-activating protein 19 1 S(1)FSGLIK 79.906 0.045883 3824500 21789 27628 23265 21433 27142 27587 39456 35044 33993 36497 TRUE FALSE 23457.18259 26256.03369 24040.64349 19681.85534 26076.2687 28636.84262 34275.3798 39624.37112 36949.64969 35306.10588 0.664394501 0.743668355 0.68092028 0.557463216 0.738576743 0.811101703 0.970806011 1.122309304 1.046551263 1 15.10763009 -7.144542694 1.715360017 1.064488681 0.670655363 0.905007863 0.055222759 0.105922435 0.614755652 0.02932984 0.019824906 7.17E-08 7.144542694 -0.393833319 S(ph)FSGNPR ddPTM_A459_MK2206_30min_R1 1 SFSGNPR 7 0 Q9NQS3-3 Q9NQS3-3 1 S(0.5)FS(0.5)GNPR 98.582 0.021764 193450000 8525.5 8071.4 8473.4 7140.9 8696 8138 7853.8 7962 4557.5 5708.3 TRUE FALSE 7800.361456 7545.950393 7898.249216 7690.893355 8349.619906 8598.766527 7329.887332 7892.389073 5031.268434 6415.487299 1.215864219 1.176208453 1.231122259 1.198801119 1.301478674 1.340313857 1.142530098 1.230208822 0.784237923 1 12.64734314 -8.249950361 24.96128749 0.892118968 1.230001246 0.777050038 0.072300769 271.4805566 589827.785 0.049084104 0.01819514 5.62E-09 8.249950361 0.337882278 S(ph)FSLASSSNSPISQR ddPTM_A459_MK2206_30min_R2 1 SFSLASSSNSPISQR 15 0 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 S(0.999)FS(0.001)LASSSNSPISQR 125.36 0.001449 0 7285.4 10087 7313 10691 9126.4 8619.1 11402 7577.1 8516.1 8931 TRUE FALSE 7843.175826 9586.094248 7556.81177 9817.511101 8768.05168 8947.10589 9904.903704 8567.452986 9256.814984 8639.582201 0.907818879 1.109555303 0.874673288 1.136340956 1.014869872 1.035594741 1.14645633 0.991651307 1.071442434 1 13.07674583 -5.772829551 24.9999878 1.057401614 0.978569745 0.23287282 0.07564341 337.3098212 740352.388 0.019951995 0.029887746 1.69E-06 5.772829551 -0.078831869 S(ph)FSLDPLMER ddPTM_A459_MK2206_30min_R1 2 SFSLDPLMER 10 0 Q63HR2-6;Q63HR2;Q63HR2-4;F8VV64;Q63HR2-2 Q63HR2-6 TNS2 Tensin-2 1 S(0.974)FS(0.026)LDPLMER;S(0.968)FS(0.032)LDPLMER 189.57 0.00018219 9252500 5175.4 5225.4 5524 5110.7 5328 5409.7 5824.6 5291.8 4723.4 4496.6 TRUE FALSE 4735.205053 4885.22551 5149.046271 5504.327 5115.774478 5715.992539 5436.051562 5245.534351 5214.414333 5053.672756 0.93698292 0.966668351 1.018872119 1.08917361 1.012288434 1.131057117 1.075663547 1.037964784 1.031806883 1 12.30311653 -5.307927369 2.285891317 1.058053226 0.941928663 0.546720761 0.036793837 0.229892924 2.260481842 0.010175547 0.033264821 4.92E-06 5.307927369 -0.116124563 S(ph)FSPTMK ddPTM_A459_MK2206_30min_R2 2 SFSPTMK 7 0 A3KN83-3;A3KN83-2;A3KN83;A3KN83-4 A3KN83-3 SBNO1 Protein strawberry notch homolog 1 1 S(1)FSPTMK;S(0.99)FS(0.01)PTMK 124.08 0.0067823 99066000 232622 299171 274338 289207 293020 245529 346880 240356 221325 281794 TRUE FALSE 250431.7192 284314.6032 283484.292 265577.863 281514.5625 254872.7781 301334.2393 271771.3545 240575.4484 272599.0849 0.918681438 1.042977101 1.039931195 0.974243414 1.032705457 0.934972978 1.105411779 0.996963561 0.882524784 1 18.05642119 -8.026307056 24.39881523 0.940756277 1.009784837 0.165336079 0.058086968 887.5126593 823128.0113 0.036651574 0.013968709 9.41E-09 8.026307056 0.06902856 S(ph)FSTTSASSQK ddPTM_A459_MK2206_30min_R1 1 SFSTTSASSQK 11 0 B5MCH3;Q8N3C7;Q8N3C7-3;Q8N3C7-2 B5MCH3 CLIP4 CAP-Gly domain-containing linker protein 4 1 S(0.762)FS(0.085)T(0.085)T(0.02)S(0.046)ASSQK 125.54 0.0033299 3481800 1429.9 1170.5 1700 1237.5 1442.4 1291.9 1411.1 1633.7 993.92 1119.8 TRUE FALSE 1308.279496 1094.300237 1584.608736 1332.812464 1384.946154 1365.046262 1316.968094 1619.416733 1097.241541 1258.529278 1.039530442 0.869507175 1.259095648 1.059023805 1.100448101 1.084636079 1.046434212 1.286753325 0.871844271 1 10.29752306 -5.240032654 24.88399964 1.096500084 0.954518828 0.166855703 0.118717102 1197.873317 1392448.758 0.027795904 0.073390363 5.75E-06 5.240032654 -0.141981255 S(ph)FTGGLGQLVVPSK ddPTM_A459_MK2206_30min_R1 2 SFTGGLGQLVVPSK 14 0 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 S(0.978)FT(0.022)GGLGQLVVPSK;S(0.994)FT(0.006)GGLGQLVVPSK 211.45 3.58E-06 61712000 7008.8 8637.8 7603.1 6453.8 8544.3 6700.9 8449.4 8209.1 6474.6 7268.6 TRUE FALSE 6412.664755 8075.47765 7087.022755 6950.872794 8203.962438 7080.299167 7885.755943 8137.328704 7147.65784 8169.089043 0.784991414 0.988540779 0.867541377 0.850874897 1.004268945 0.866718324 0.965316439 0.996112132 0.874963879 1 12.99595949 -1.522878745 0.151355801 0.99568936 0.495540636 0.240006046 0.065627087 108.848305 1.081576482 0.220051176 11.97263843 0.03 1.522878745 -0.500148724 S(ph)FTGGLGQLVVPSK ddPTM_A459_MK2206_30min_R2 2 SFTGGLGQLVVPSK 14 0 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 S(0.688)FT(0.312)GGLGQLVVPS(0.001)K;S(0.982)FT(0.018)GGLGQLVVPSK 168.55 0.00019401 56929000 287840 331850 343190 384630 340690 335700 380550 261500 336000 421780 TRUE FALSE 309877.2517 315370.8116 354631.7833 353204.4986 327312.7988 348475.2987 330583.3279 295678.9479 365224.6727 408017.3531 0.759470766 0.772934801 0.86915858 0.865660482 0.802203132 0.854069799 0.810218794 0.724672482 0.89512044 1 18.63827099 -8.527310638 22.24002978 1.000000002 0.811537643 0.649305317 0.044602697 66.7310323 334871.7365 0.044968083 0.011610709 2.97E-09 8.527310638 -0.188462359 S(ph)FTLDDESLK ddPTM_A459_MK2206_30min_R1 4 SFTLDDESLK 10 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(0.999)FT(0.001)LDDESLK;S(1)FTLDDESLK;S(0.872)FT(0.128)LDDESLK;S(0.995)FT(0.005)LDDESLK 193.28 8.96E-05 142336000 13002.1 15302.2 15207.1 12217.4 10230.6 8866.3 11349.4 10851.7 12491.2 13469.8 TRUE FALSE 11896.20312 14306.024 14174.88442 13158.38626 9823.093538 9368.302244 10592.30223 10756.82473 13789.70494 15138.54052 0.785822326 0.945006818 0.936344188 0.86919781 0.648879826 0.618837875 0.699691111 0.710558902 0.910900554 1 13.8859385 -6.109547472 6.612084566 0.740184544 0.895895959 0.181040087 0.117664504 0.327478989 17.25368885 0.03452886 0.044872254 7.77E-07 6.109547472 0.155711415 S(ph)FTLDDESLK ddPTM_A459_MK2206_30min_R2 2 SFTLDDESLK 10 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(0.998)FT(0.002)LDDESLK;S(1)FTLDDESLK 179.94 9.01E-05 40181000 230027 200823 208892 167708 181129 126308 188332 160857 148761 192330 TRUE FALSE 247638.044 190850.4218 215856.355 154005.7199 174016.9654 131114.7394 163603.7822 181881.5622 161699.9629 186054.2879 1.330998854 1.025778143 1.160179416 0.827746147 0.935302096 0.70471227 0.879333575 0.977572537 0.869100975 1 17.50536411 -4.755769021 0.862952015 0.878445278 1.546634815 0.611878389 0.104388996 1.624458615 0.908166053 0.037569795 1.047711731 1.75E-05 4.755769021 0.668189537 S(ph)FTPDHVVYAR ddPTM_A459_MK2206_30min_R1 1 SFTPDHVVYAR 11 0 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 S(1)FTPDHVVYAR 176.18 7.18E-05 18831000 693.79 550.63 612.07 486.17 415.9 529.19 653.69 555.76 361.8 617.66 TRUE FALSE 634.7795173 514.7838869 570.5243937 523.6148976 399.3338223 559.1522805 610.0835328 550.9010489 399.4104047 694.1803839 0.914430214 0.741570777 0.82186764 0.75429227 0.575259445 0.805485568 0.878854469 0.793599274 0.575369766 1 9.439166788 -9.761881638 23.90584081 1 0.763326992 0.309262505 0.106560699 0 0 0.104014733 0.025227278 1.73E-10 9.761881638 -0.236673008 S(ph)FTPDHVVYAR ddPTM_A459_MK2206_30min_R2 2 SFTPDHVVYAR 11 0 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 S(0.992)FT(0.008)PDHVVYAR;S(1)FTPDHVVYAR 167.2 0.00055082 44177000 105623 88683 78070 78772 100780 78150 93931 78480 68703 82246 TRUE FALSE 113709.5781 84279.13118 80672.81483 72336.07562 96822.87082 81124.05301 81597.74687 88737.60546 74678.66275 79562.31976 1.429188823 1.059284488 1.01395755 0.909175045 1.216943788 1.019629056 1.025582803 1.115321998 0.938618469 1 16.27979772 -4.761610928 5.157827775 1.035857414 1.45226812 0.679681564 0.081699011 0.095191159 7.06411712 0.019811139 0.143291094 1.73E-05 4.761610928 0.416410706 S(ph)FTSLYK ddPTM_A459_MK2206_30min_R2 1 SFTSLYK 7 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.999)FT(0.001)SLYK 85.731 0.035833 8087000 30843 37327 30908 30110 28421 31822 34119 23848 28584 34080 TRUE FALSE 33204.36379 35473.39546 31938.45729 27649.91668 27305.04874 33033.00851 29639.13432 26965.01548 31070.18465 32967.97239 1.007170335 1.075995667 0.968772265 0.83869024 0.828229544 1.001972706 0.899028122 0.817915496 0.942435412 1 15.00877754 -5.520716959 5.456591756 0.897198996 1.038430619 0.426072984 0.063646401 0.141560987 14.18117946 0.017122735 0.032805619 3.01E-06 5.520716959 0.141231624 S(ph)FVDAEVDVTR ddPTM_A459_MK2206_30min_R1 1 SFVDAEVDVTR 11 0 A0A2R8YHB3;A0A1B0GUB2;A0A3B3IRP5;Q6P1J9 A0A2R8YHB3 CDC73 Parafibromin 1 S(1)FVDAEVDVTR 120.53 0.0035794 0 722.65 410.85 344.87 403.69 1044.7 1076.2 768.47 622.15 476.39 290.22 TRUE FALSE 661.1848227 384.1035903 321.4611853 434.7822737 1003.087387 1137.133514 717.2067685 616.7106081 525.9124453 326.1746446 2.027088351 1.177601008 0.985549277 1.332973856 3.075307671 3.486271949 2.198842799 1.890737426 1.612364584 1 8.349500828 -6.223067115 22.93073717 2.31832121 1.338055215 0.239775795 0.706780357 277.3587038 165744.7891 0.219747221 0.283681121 5.98E-07 6.223067115 -0.980265995 S(ph)FVDAEVDVTR ddPTM_A459_MK2206_30min_R2 2 SFVDAEVDVTR 11 0 A0A2R8YHB3;A0A1B0GUB2;A0A3B3IRP5;Q6P1J9 A0A2R8YHB3 CDC73 Parafibromin 1 S(1)FVDAEVDVTR;S(1)FVDAEVDVTR 136.27 0.0014288 1977780 4652.8 12267.4 9083.4 12355.8 11541.1 15358.5 10572.8 9227.6 12818.5 8375.1 TRUE FALSE 5009.021945 11658.21875 9386.236022 11346.29162 11087.93842 15942.97848 9184.57866 10433.679 13933.42996 8101.821173 0.618258764 1.438962735 1.15853409 1.400461868 1.368573582 1.96782651 1.133643716 1.287818971 1.719789867 1 12.98403053 -4.759618292 24.92459575 1.398240439 0.618257746 0.420828602 0.269930484 43.71065677 598077.8126 0.065292297 0.409521328 1.74E-05 4.759618292 -0.779982693 S(ph)FVLNLGK ddPTM_A459_MK2206_30min_R2 1 SFVLNLGK 8 0 P09382 P09382 LGALS1 Galectin-1 1 S(1)FVLNLGK 107.83 0.013134 4695600 17910 22842 20083 22342 21403 22904 23877 18186 19326 17519 TRUE FALSE 19281.20337 21707.6995 20752.5572 20516.58713 20562.61068 23775.62777 20741.92122 20562.97264 21006.94055 16947.35646 1.137711561 1.280890004 1.224530636 1.210606927 1.213322604 1.402910703 1.223903047 1.213343962 1.239540845 1 14.04877263 -9.582008004 1.142707709 0.99854701 1.243199744 0.551356897 0.064471118 10.41625849 10.32469091 0.125129632 0.019065998 2.62E-10 9.582008004 0.244652735 S(ph)FVPEEEKHEER ddPTM_A459_MK2206_30min_R1 1 SFVPEEEKHEER 12 1 A0A0U1RRH6;O94880;O94880-2;B4DG57 A0A0U1RRH6 PHF14 PHD finger protein 14 1 S(1)FVPEEEKHEER 68.168 0.038547 2476700 1546.1 1094.2 1143.3 722.36 1892 1702.3 1697.8 1177.4 645.21 716.65 TRUE FALSE 1414.596076 1022.967381 1065.695981 777.9962924 1816.637634 1798.682755 1584.54286 1167.106116 712.2818884 805.4340124 1.756315296 1.270082174 1.323132578 0.965934242 2.255476682 2.233184503 1.967315553 1.449040018 0.88434543 1 9.653622586 -6.241353491 24.98980149 1.700881417 1.32425775 0.079831422 0.469180723 1901.64784 2365929.544 0.146720982 0.189166307 5.74E-07 6.241353491 -0.376623668 S(ph)FVPEEEKHEER ddPTM_A459_MK2206_30min_R2 2 SFVPEEEKHEER 12 1 A0A0U1RRH6;O94880;O94880-2;B4DG57 A0A0U1RRH6 PHF14 PHD finger protein 14 1 S(1)FVPEEEKHEER;S(1)FVPEEEKHEER 86.498 0.012762 18507500 351870 318640 301810 246249 170272 140230 191243 151861 113297 169319 TRUE FALSE 378809.4377 302816.8009 311872.1948 226129.669 163586.2657 145566.5509 166132.5644 171709.7541 123151.3683 163794.1349 2.31271674 1.848764616 1.90404983 1.380572443 0.998730912 0.888716504 1.014276637 1.048326634 0.751866777 1 17.32152417 -5.835279679 1.358357432 0.931952874 2.135039088 0.937688316 0.124593166 0.097267321 0.362279772 0.042054019 0.09301276 1.46E-06 5.835279679 1.203086214 up S(ph)FYPEEVSSMVLTK ddPTM_A459_MK2206_30min_R1 1 SFYPEEVSSMVLTK 14 0 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PI65;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 S(1)FYPEEVSSMVLTK 141.06 0.00055737 9918300 2904 3303.3 2874.7 2397.8 2992.8 2732.9 2828.7 2831.4 2905.2 2242.1 TRUE FALSE 2656.99955 3088.25457 2679.573373 2582.478971 2873.590439 2887.634436 2640.002584 2806.645368 3207.205936 2519.868275 1.054420017 1.225561907 1.063378352 1.024846813 1.140373276 1.145946582 1.047674837 1.113806383 1.272767298 1 11.2991326 -8.022631259 24.86266114 1.155351363 1.102435471 0.018419173 0.083224293 2194.98696 2411391.907 0.052662405 0.020245697 9.49E-09 8.022631259 -0.052915892 S(ph)FYPEEVSSMVLTK ddPTM_A459_MK2206_30min_R2 1 SFYPEEVSSMVLTK 14 0 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PI65;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 S(0.999)FYPEEVSSMVLTK 79.652 0.035596 3727900 11527 12762 7811.7 14999 11074 9602.4 13252 10638 7932.8 9099.5 TRUE FALSE 12409.51598 12128.25764 8072.138179 13773.53372 10639.17912 9967.826061 11511.99648 12028.42313 8622.780605 8802.58406 1.409758305 1.377806512 0.917019153 1.564714819 1.208642717 1.132374993 1.307797393 1.366465011 0.979573787 1 13.10371138 -14.52287875 0.105245188 0.10625814 1.425507266 0.215968441 0.180228282 298.8859889 2.107104848 56.82241544 2.569090058 3.00E-15 14.52287875 1.319249126 S(ph)GAEVEAGDAAER ddPTM_A459_MK2206_30min_R2 2 SGAEVEAGDAAER 13 0 A0A087WZ13;E9PAU2;Q8IY67-2;Q8IY67;Q8IY67-3;K7EKR9 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 S(1)GAEVEAGDAAER;S(1)GAEVEAGDAAER 152.11 0.00044754 17464400 19799.7 23411 23760 26778 27001 30301 26922 22912 23073 26363 TRUE FALSE 21315.58026 22248.44378 24552.14654 24590.15174 25940.80507 31454.12579 23387.10906 25906.67707 25079.84783 25502.77747 0.835814071 0.87239297 0.962724416 0.964214654 1.017175682 1.233360791 0.917041647 1.015837475 0.98341633 1 14.63836676 -5.395200954 1.291752628 1.029191362 0.82637802 0.427606024 0.077210478 0.5940073 1.650495214 0.02565613 0.118835099 4.03E-06 5.395200954 -0.202813341 S(ph)GAICHPVFCPRRY(ph)KQIGTCGLPGTK ddPTM_A459_MK2206_30min_R1 1 SGAICHPVFCPRRYKQIGTCGLPGTK 26 3 O15263 O15263 DEFB4A Beta-defensin 4A 2 S(1)GAICHPVFCPRRY(0.996)KQIGT(0.004)CGLPGTK 55.02 0.02004 5154200 588.45 654.52 387.88 358.88 418.1 515.96 410.88 442.97 436.92 550.64 TRUE FALSE 538.3992374 611.910629 361.5517863 386.5209998 401.4461917 545.1732093 383.4709449 439.09716 482.3393975 618.8574403 0.869989116 0.988774779 0.584224674 0.624571952 0.648689287 0.880935049 0.619643427 0.709528773 0.779403084 1 9.273463299 -9.755719509 12.23825593 0.999999999 0.740401387 0.265186475 0.127085601 0 0 0.129578865 0.031427491 1.76E-10 9.755719509 -0.259598612 S(ph)GAQASSTPLSPTR ddPTM_A459_MK2206_30min_R1 1 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.654)GAQAS(0.019)S(0.066)T(0.238)PLS(0.019)PT(0.005)R 145.49 0.00030196 0 1756.1 1969.4 1451.8 1372 1666.5 1788.3 1665.3 1525.7 1509.2 1329.9 TRUE FALSE 1606.734473 1841.191702 1353.255861 1477.671678 1600.119776 1889.552001 1554.210876 1512.360966 1666.086741 1494.658052 1.074984657 1.231848114 0.905394956 0.988635277 1.070559098 1.26420354 1.039843778 1.011844123 1.114694253 1 10.54559975 -10.94861286 2.893024318 0.998324742 1.077010361 0.050229294 0.101671929 47617260.63 56841065.84 658837.8763 0.027128008 1.13E-11 10.94861286 0.078685619 S(ph)GAQASSTPLSPTR ddPTM_A459_MK2206_30min_R2 3 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(1)GAQASSTPLSPTR;S(0.526)GAQAS(0.093)S(0.288)T(0.093)PLS(0.001)PTR;S(0.969)GAQAS(0.021)S(0.007)T(0.002)PLSPT(0.002)R 137.4 0.00058731 108596000 64050.7 85117.5 69580 87194.1 85839.5 74343.2 71350.8 63334.8 55106.5 75180.7 TRUE FALSE 68954.47084 80890.68872 71899.76247 80070.06311 82469.00992 77172.38257 61982.35425 71612.87582 59899.56376 72727.55992 0.94812023 1.112242578 0.98861783 1.10095902 1.133944409 1.06111607 0.852254006 0.984673154 0.823615749 1 16.15021455 -7.245070531 23.94970718 0.913858497 1.062307485 0.482746772 0.072085756 376.7654153 551256.1694 0.026304509 0.02030358 5.69E-08 7.245070531 0.148448988 S(ph)GASAAPAASAAAALAPSATR ddPTM_A459_MK2206_30min_R1 2 SGASAAPAASAAAALAPSATR 21 0 A0A0M3HER2;Q7Z7K6-3 A0A0M3HER2 1 S(1)GASAAPAASAAAALAPSATR;S(0.951)GAS(0.049)AAPAASAAAALAPSATR 283.64 3.36E-153 0 1574.2 1591.84 1643.91 1073.41 1672.1 1577.59 1843.65 1611.86 1305.41 1013.8 TRUE FALSE 1440.306024 1488.210927 1532.325969 1156.084224 1605.496716 1666.911782 1720.663472 1597.767678 1441.112041 1139.397198 1.264094757 1.306138833 1.344856712 1.014645487 1.409075535 1.462976902 1.510152452 1.40229209 1.264802164 1 10.15405505 S(ph)GASAAPAASAAAALAPSATR ddPTM_A459_MK2206_30min_R2 2 SGASAAPAASAAAALAPSATR 21 0 A0A0M3HER2;Q7Z7K6-3 A0A0M3HER2 1 S(1)GASAAPAASAAAALAPSATR;S(0.999)GAS(0.001)AAPAASAAAALAPSATR 138.82 2.50E-05 14230100 27333 26104 23200.1 34290 25251 24891 30609 19402.9 20601.6 20901.4 TRUE FALSE 29425.6355 24807.71332 23973.57975 31488.39731 24259.51886 25838.24445 26590.00153 21938.92565 22393.48993 20219.38903 1.455317737 1.22692695 1.185672807 1.557336736 1.199814635 1.277894421 1.315074431 1.085043946 1.107525549 1 14.30345178 -7.918465302 1.176112554 1.013208139 1.32197407 0.508833921 0.11257544 0.403732959 1.007438928 0.099376057 0.03594005 1.21E-08 7.918465302 0.308765931 S(ph)GASEANLIVAK ddPTM_A459_MK2206_30min_R1 4 SGASEANLIVAK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.999)GAS(0.001)EANLIVAK;S(1)GASEANLIVAK;S(0.997)GAS(0.003)EANLIVAK;S(1)GASEANLIVAK 167.61 0.00042224 32775700 9098.9 8590.4 7579.2 6683.4 7250.9 7817.4 7047.2 6134.5 7032.3 5876.5 TRUE FALSE 8324.990775 8031.163399 7064.745021 7198.156626 6962.081299 8260.014432 6577.094146 6080.866713 7763.33275 6604.525185 1.260497998 1.216009202 1.069682501 1.089882531 1.05413805 1.250659843 0.99584663 0.92071217 1.175456605 1 12.68923913 -1.522878745 0.413247131 1.044054096 5.081082829 0.363884993 0.088676731 86.18238909 1.117982105 0.062746786 286.1757098 0.03 1.522878745 4.037028733 S(ph)GASEANLIVAK ddPTM_A459_MK2206_30min_R2 2 SGASEANLIVAK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.999)GAS(0.001)EANLIVAK;S(1)GASEANLIVAK 168.93 0.00036847 28639000 86580 75143 62671 77173 78442 69779 93800 72563 48511 79351 TRUE FALSE 93208.63137 71411.50789 64760.41986 70867.71904 75361.97294 72434.48874 81483.94733 82047.23325 52730.39909 76761.78337 1.214258284 0.930300271 0.843654447 0.923216162 0.981764227 0.943626966 1.061517122 1.068855225 0.686935566 1 16.22810061 -4.759940654 24.79749263 0.941945112 1.214258655 0.383103604 0.105137866 37.41074683 618755.8404 0.025865282 0.15813247 1.74E-05 4.759940654 0.272313542 S(ph)GCCDDSALAR ddPTM_A459_MK2206_30min_R1 2 SGCCDDSALAR 11 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 S(1)GCCDDSALAR;S(0.893)GCCDDS(0.107)ALAR 170.4 0.00036539 10200400 1513.43 1868.28 1893.83 1795.97 1693.77 1655.54 1525.81 1752.74 1360.21 1194.13 TRUE FALSE 1384.704831 1746.654632 1765.282096 1934.295921 1626.303554 1749.275244 1424.025999 1737.415979 1501.608697 1342.06784 1.031769625 1.301465232 1.315344906 1.441280287 1.211789379 1.303417899 1.061068567 1.294581338 1.118876895 1 10.39024188 -7.245953933 24.73000153 1.143180141 1.276594632 0.257707396 0.120356068 1092.397401 1744542.062 0.045945334 0.035454692 5.68E-08 7.245953933 0.133414491 S(ph)GCCDDSALAR ddPTM_A459_MK2206_30min_R2 2 SGCCDDSALAR 11 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 S(1)GCCDDSALAR;S(1)GCCDDSALAR 170.4 0.00036539 15359300 24508 23357.4 27769 25256 25374 32875 28171 23409.6 27683 24370.1 TRUE FALSE 26384.35132 22197.50548 28694.8046 23192.50401 24377.68927 34126.08116 24472.11386 26469.3151 30090.8173 23574.90563 1.119171026 0.941573461 1.217175799 0.983779294 1.034052464 1.447559608 1.038057765 1.122775018 1.276391845 1 14.52496438 S(ph)GDDLFPK ddPTM_A459_MK2206_30min_R1 3 SGDDLFPK 8 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 S(1)GDDLFPK;S(1)GDDLFPK;S(1)GDDLFPK 112.71 0.011056 12612500 8402.4 9208.7 9988.6 8418.9 7176.8 8340.3 11187 8380.6 9894.4 9965.6 TRUE FALSE 7687.731757 8609.211956 9310.601662 9067.325137 6890.932859 8812.520578 10440.73564 8307.329298 10922.95829 11200.21376 0.686391521 0.768664968 0.831287854 0.80956715 0.61525012 0.786817177 0.932190748 0.741711674 0.975245519 1 13.45123865 -8.191006894 0.786881627 1.005163175 0.753296083 0.51486222 0.082024851 0.531050403 0.700440399 0.079651502 0.03164125 6.44E-09 8.191006894 -0.251867092 S(ph)GDDLFPK ddPTM_A459_MK2206_30min_R2 1 SGDDLFPK 8 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 S(1)GDDLFPK 97.565 0.020166 1429900 18873 15724 15513 17122 14183 10695 19565 14809 10728 18836 TRUE FALSE 20317.93139 14943.16902 16030.19568 15723.07783 13626.10416 11102.00572 16996.092 16744.58715 11661.10205 18221.38286 1.115059792 0.820089734 0.879746384 0.862891579 0.747808454 0.609284477 0.932755331 0.918952599 0.639968006 1 14.15334483 -2.516919026 1.404963336 0.812187249 199.9728968 0.337493623 0.120380023 1070.820801 4.252794509 0.033898143 685141.6564 0.003041452 2.516919026 199.1607095 S(ph)GDEEFKGEDELCDSGR ddPTM_A459_MK2206_30min_R1 3 SGDEEFKGEDELCDSGR 17 1 O43823;M0QYL4 O43823 AKAP8 A-kinase anchor protein 8 1 S(0.981)GDEEFKGEDELCDS(0.019)GR;S(1)GDEEFKGEDELCDSGR;S(1)GDEEFKGEDELCDSGR 128.99 0.0046166 42735200 4329.59 5473.26 5123.52 3361.97 2907.41 3044.71 4047.21 3394.89 6652.2 8703.8 TRUE FALSE 3961.335635 5116.949779 4775.749737 3620.909512 2791.601703 3217.098849 3777.228005 3365.208835 7343.719995 9782.092454 0.404957902 0.523093582 0.488213515 0.37015695 0.285378789 0.328876349 0.386137018 0.34401728 0.750730994 1 13.25592738 -8.458086344 3.101715687 0.996600615 0.392454411 0.894400818 0.068985684 0.075273611 1.510578199 0.076407611 0.020404888 3.48E-09 8.458086344 -0.604146204 down S(ph)GDEEFKGEDELCDSGR ddPTM_A459_MK2206_30min_R2 3 SGDEEFKGEDELCDSGR 17 1 O43823;M0QYL4 O43823 AKAP8 A-kinase anchor protein 8 1 S(1)GDEEFKGEDELCDSGR;S(0.991)GDEEFKGEDELCDS(0.009)GR;S(1)GDEEFKGEDELCDSGR 198.61 3.26E-07 52614100 109685 65596 83641 61623 51150 38558.9 80918 65194 47616.4 96978 TRUE FALSE 118082.5679 62338.59803 86429.54919 56588.20378 49141.59399 40026.28596 70293.3694 73715.07964 51757.9884 93813.6158 1.258693282 0.664494141 0.921290033 0.603198196 0.523821554 0.426657534 0.749287497 0.78576099 0.551710836 1 16.51750971 -2.508045357 1.25658637 0.661477424 200 0.476073349 0.173681473 426.6595243 2.63932682 0.05017114 243044.505 0.003104235 2.508045357 199.3385226 S(ph)GDETPGSEVPGDK ddPTM_A459_MK2206_30min_R1 4 SGDETPGSEVPGDK 14 0 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.999)GDET(0.001)PGSEVPGDK;S(0.982)GDET(0.017)PGS(0.001)EVPGDK;S(1)GDETPGSEVPGDK;S(0.989)GDET(0.011)PGSEVPGDK 195.87 0.00011558 346692000 21760.3 25032.4 25218.7 17370 15963.8 15853.9 24415.3 19757.9 30050.9 40707.2 TRUE FALSE 19909.47222 23402.78621 23506.92491 18707.84041 15327.92804 16751.53412 22786.59989 19585.15876 33174.79859 45750.31526 0.435176722 0.511532786 0.513809026 0.408911727 0.33503437 0.366151228 0.498064325 0.428087952 0.725127213 1 15.48149406 -8.505238941 2.294065624 0.999322003 0.435020505 0.907977923 0.057467727 0.087628032 1.060209318 0.061505109 0.016906904 3.12E-09 8.505238941 -0.564301499 down S(ph)GDETPGSEVPGDK ddPTM_A459_MK2206_30min_R2 3 SGDETPGSEVPGDK 14 0 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(1)GDETPGSEVPGDK;S(1)GDETPGSEVPGDK;S(0.999)GDET(0.001)PGSEVPGDK 214.58 1.08E-06 650720000 175153 123614 152300 138267 118567 95548 159988 112175 83756 161347 TRUE FALSE 188562.8483 117475.5085 157377.606 126970.1438 113911.4638 99184.14609 138981.3834 126836.6577 91040.94548 156082.2606 1.208099163 0.75265125 1.00829912 0.81348222 0.72981685 0.635460723 0.890436766 0.81262699 0.58328823 1 17.25194705 -2.147177482 1.137090828 0.785175242 200 0.423870267 0.135951233 750.1269997 2.583761152 0.039939513 387820.3583 0.007125618 2.147177482 199.2148248 S(ph)GDETPGSEVPGDKAAEEQGDDQDSEK ddPTM_A459_MK2206_30min_R1 1 SGDETPGSEVPGDKAAEEQGDDQDSEK 27 1 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.946)GDET(0.041)PGS(0.013)EVPGDKAAEEQGDDQDSEK 80.022 5.78E-05 12471000 610.98 896.48 947.39 894.41 586.39 405.04 368.39 845.01 483.73 252.08 TRUE FALSE 559.0129426 838.1189891 883.0838064 963.2976132 563.0328446 427.9730148 343.8153753 837.6221667 534.0154645 283.3095735 1.973152321 2.958315099 3.117027764 3.40015906 1.987341401 1.510619671 1.213567798 2.956561461 1.884918529 1 8.146235543 -6.396864704 5.97442217 1.799289285 2.882706302 0.451386663 0.597755786 0.237469636 10.57746962 0.192517335 0.218170504 4.01E-07 6.396864704 1.083417017 S(ph)GDETPGSEVPGDKAAEEQGDDQDSEK ddPTM_A459_MK2206_30min_R2 2 SGDETPGSEVPGDKAAEEQGDDQDSEK 27 1 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.967)GDET(0.027)PGS(0.007)EVPGDKAAEEQGDDQDSEK;S(1)GDETPGSEVPGDKAAEEQGDDQDSEK 147.52 5.38E-14 25170000 28349 56735 49823 43832 51678 27620 49778 34825 38717 41160 TRUE FALSE 30519.42124 53917.6224 51484.07395 40250.78539 49648.86206 28671.09845 43242.08881 39376.74707 42084.53468 39816.95257 0.766493146 1.354137344 1.293018944 1.010895681 1.246927724 0.720072648 1.086022059 0.988944269 1.056950167 1 15.28109519 -6.705653143 24.99998438 0.976925158 1.148470494 0.169671142 0.179632299 152.0449411 68136.42392 0.057689902 0.057689864 1.97E-07 6.705653143 0.171545336 S(ph)GDLGDMEPLK ddPTM_A459_MK2206_30min_R1 2 SGDLGDMEPLK 11 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14;O60716-27;O60716-29;O60716-25;O60716-26;O60716-31;O60716-32;O60716-30;O60716-28;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 S(1)GDLGDMEPLK;S(1)GDLGDMEPLK 182.1 3.84E-05 14549800 4211.7 4197.3 3630.7 2434.7 2862.6 2307.64 4017.9 3261.8 6059.4 8089.7 TRUE FALSE 3853.472798 3924.055007 3384.2582 2622.221016 2748.57658 2438.296583 3749.873222 3233.282426 6689.296314 9091.91311 0.423835199 0.431598384 0.372227292 0.288412459 0.302310036 0.268183005 0.412440504 0.355621791 0.735741338 1 13.15036818 -8.445253507 2.406585038 0.998533386 0.351077797 0.935797862 0.055611389 0.06565052 0.81038344 0.058618678 0.016104202 3.59E-09 8.445253507 -0.64745559 down S(ph)GDLGDMEPLK ddPTM_A459_MK2206_30min_R2 1 SGDLGDMEPLK 11 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14;O60716-27;O60716-29;O60716-25;O60716-26;O60716-31;O60716-32;O60716-30;O60716-28;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 S(1)GDLGDMEPLK 119.21 0.0050849 2819000 27439 14955 14930 17653 13241 10171 20695 15968 9898.8 20567 TRUE FALSE 29539.75094 14212.35645 15427.75875 16210.69343 12721.09181 10558.06453 17977.72164 18055.07243 10759.77973 19895.90047 1.484715456 0.714335924 0.775424001 0.814775559 0.639382562 0.530665327 0.903589243 0.907477018 0.540803858 1 14.28018358 -4.759670005 24.9631565 0.75158353 1.48471639 0.682225795 0.148623779 25.53595673 360167.444 0.036306387 0.226875923 1.74E-05 4.759670005 0.73313286 S(ph)GDYSTMEGPELR ddPTM_A459_MK2206_30min_R1 2 SGDYSTMEGPELR 13 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 S(1)GDYSTMEGPELR;S(1)GDYSTMEGPELR 217.46 1.84E-08 12427700 1796.81 1617.7 1702.68 1265.1 1957.46 1929.82 1735.69 1580.01 1545.37 1587.27 TRUE FALSE 1643.981874 1512.387436 1587.106826 1362.538221 1879.490223 2039.084741 1619.905287 1566.196139 1706.016742 1783.912991 0.92155945 0.847792153 0.889677262 0.76379186 1.053577295 1.143040468 0.908062947 0.877955454 0.956334054 1 10.80082954 -6.268920466 24.98588206 0.987298475 0.857566541 0.410134811 0.078751617 666.8738199 2227271.147 0.026737029 0.030918437 5.38E-07 6.268920466 -0.129731933 S(ph)GDYSTMEGPELR ddPTM_A459_MK2206_30min_R2 2 SGDYSTMEGPELR 13 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 S(1)GDYSTMEGPELR;S(1)GDYSTMEGPELR 167.22 0.00031163 7006600 12430.8 11430.8 13733.2 11655.3 13364.4 12758.6 14493.6 8999.1 12773.6 11766.4 TRUE FALSE 13382.51161 10863.16309 14191.05803 10703.02471 12839.64651 13244.13746 12590.57291 10175.31327 13884.62464 11382.46333 1.175713131 0.954377166 1.246747529 0.940308297 1.128020019 1.163556348 1.106137797 0.893946501 1.219825993 1 13.47452519 -14.52287874 0.261484613 0.450563141 1.092329372 0.04623127 0.116669893 720.6364397 7.059099157 213.2825095 0.144114527 3.00E-15 14.52287874 0.641766232 S(ph)GEGEVSGLMR ddPTM_A459_MK2206_30min_R1 2 SGEGEVSGLMR 11 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 S(1)GEGEVSGLMR;S(1)GEGEVSGLMR 190.66 1.99E-05 68252000 1902.86 1671.44 1805.02 1576.74 1954.36 1574.37 2070.98 1651.09 1910.07 1629.56 TRUE FALSE 1741.011765 1562.628952 1682.500271 1698.180788 1876.513703 1663.509469 1932.828703 1636.654694 2108.628612 1831.442195 0.950623377 0.85322319 0.918675062 0.927236902 1.024609844 0.908305746 1.055358836 0.893642561 1.151348711 1 10.83876445 -6.606998244 0.548344639 1.031720149 0.889564308 0.303977224 0.070859166 1.210446512 0.783221209 0.055541372 0.079132112 2.47E-07 6.606998244 -0.142155841 S(ph)GEGEVSGLMR ddPTM_A459_MK2206_30min_R2 2 SGEGEVSGLMR 11 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 S(1)GEGEVSGLMR;S(1)GEGEVSGLMR 166.24 0.0006064 50767000 19043 23056.8 19230.1 23057 18090.9 14741.6 17946.3 19580.5 20720.6 19468.4 TRUE FALSE 20500.94672 21911.83284 19871.22194 21173.16934 17380.56037 15302.60192 15589.92925 22139.73858 22522.84033 18833.1477 1.088556573 1.163471619 1.055119529 1.124250161 0.922870709 0.812535544 0.827792013 1.175572928 1.195914814 1 14.20098653 -6.249205821 24.34248917 0.980997925 1.108056068 0.186195158 0.120894923 1022.929933 2035436.531 0.040486387 0.051846609 5.63E-07 6.249205821 0.127058143 S(ph)GELMIK ddPTM_A459_MK2206_30min_R1 2 SGELMIK 7 0 Q9BQS8;Q9BQS8-4;C9J2W6;H7BZ74 Q9BQS8 FYCO1 FYVE and coiled-coil domain-containing protein 1 1 S(1)GELMIK;S(1)GELMIK 96.034 0.023406 7327300 4492.7 3802.5 3637.7 3744.5 3530.2 3340 3599.4 3875.8 3313.7 2889.6 TRUE FALSE 4110.572273 3554.956559 3390.783059 4032.902039 3389.584659 3529.107914 3359.290593 3841.914289 3658.170973 3247.585463 1.265731824 1.094646037 1.044093557 1.241815522 1.043724545 1.086686695 1.034396364 1.18300637 1.126427931 1 11.66515178 -4.760323036 24.85902373 1.099941056 1.265732037 0.349178484 0.069639818 30.04048352 668626.5563 0.016754838 0.10001567 1.74E-05 4.760323036 0.165790981 S(ph)GEQIFTQDVRPEQLLEGK ddPTM_A459_MK2206_30min_R2 2 SGEQIFTQDVRPEQLLEGK 19 1 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(1)GEQIFTQDVRPEQLLEGK;S(1)GEQIFTQDVRPEQLLEGK 103.35 0.00055405 10399200 29942 23646.1 29627 28512 14553.5 20744.8 23585 15499.7 17452.8 30324 TRUE FALSE 32234.38254 22471.86906 30614.74939 26182.47839 13982.05646 21534.2579 20488.26117 17525.56401 18970.813 29334.53036 1.098854563 0.766055184 1.04364205 0.892548068 0.476641565 0.734092472 0.698434947 0.597438029 0.646705871 1 14.84031227 -6.065470071 8.651937513 0.674898741 0.952360272 0.423029169 0.148447168 0.334349593 41.81708177 0.040855245 0.052955232 8.60E-07 6.065470071 0.277461531 S(ph)GEQITSSPVSPK ddPTM_A459_MK2206_30min_R1 4 SGEQITSSPVSPK 13 0 A0A087WZV0;O43314;O43314-2;A0A087WWN8 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 S(1)GEQITSSPVSPK;S(0.988)GEQIT(0.009)S(0.003)SPVSPK;S(0.657)GEQIT(0.097)S(0.062)S(0.056)PVS(0.127)PK;S(1)GEQITSSPVSPK 145.94 0.00061379 21790100 12006.2 10598.6 11378.6 10182.7 13574.7 10097.3 10520 8393.4 7466.5 7306.8 TRUE FALSE 10985.00964 9908.629214 10606.25233 10966.97332 13033.99095 10669.0004 9818.229995 8320.017389 8242.669394 8212.021548 1.337674235 1.206600489 1.291551937 1.335477903 1.587184213 1.299192938 1.195592332 1.013150945 1.003732071 1 13.0035217 -7.555663896 2.295271313 0.999541464 1.345162028 0.734726226 0.09092289 0.176713126 1.858612586 0.058230919 0.030040902 2.78E-08 7.555663896 0.345620564 S(ph)GEQITSSPVSPK ddPTM_A459_MK2206_30min_R2 4 SGEQITSSPVSPK 13 0 A0A087WZV0;O43314;O43314-2;A0A087WWN8 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 S(1)GEQITSSPVSPK;S(1)GEQITSSPVSPK;S(1)GEQITSSPVSPK;S(0.999)GEQITSSPVSPK 182.7 1.32E-14 28219000 156767 164446 145881 142156 149391 101541 141844 94686 80033 128186 TRUE FALSE 168769.2021 156279.8508 150744.5997 130541.4001 143525.1587 105405.2139 123219.7124 107061.7853 86994.12567 124003.3013 1.361005717 1.260287824 1.215649891 1.052725199 1.157430142 0.850019417 0.993680903 0.863378508 0.701546852 1 16.920019 -6.02588769 0.606151863 0.845381445 1.387321429 0.757998313 0.096103992 0.527854018 0.367336711 0.061917679 0.166443358 9.42E-07 6.02588769 0.541939985 S(ph)GFGEISSPVIR ddPTM_A459_MK2206_30min_R1 1 SGFGEISSPVIR 12 0 P57740;G3V1T4 P57740 NUP107 Nuclear pore complex protein Nup107 1 S(1)GFGEISSPVIR 119.25 0.0043219 2198600 1191.2 1222.2 935.99 886.72 1450 1192.5 1052.3 1022.5 851.04 941.62 TRUE FALSE 1089.882185 1142.634558 872.4576066 955.015328 1392.24343 1260.018319 982.102987 1013.56039 939.5086535 1058.274994 1.029866708 1.079714218 0.824414837 0.902426433 1.315578122 1.190634123 0.928022482 0.957747651 0.887773649 1 10.04749885 S(ph)GGDGGDEVEGSGVGAGEGETVQHFPLAR ddPTM_A459_MK2206_30min_R2 2 SGGDGGDEVEGSGVGAGEGETVQHFPLAR 29 0 Q96DT7-3;Q96DT7-2;Q96DT7 Q96DT7-3 ZBTB10 Zinc finger and BTB domain-containing protein 10 1 S(1)GGDGGDEVEGSGVGAGEGETVQHFPLAR;S(1)GGDGGDEVEGSGVGAGEGETVQHFPLAR 259 7.00E-74 7927400 6041.1 5717.6 6711.8 7427.3 8075.7 6278.2 6317.3 5061.2 6939.7 6971.3 TRUE FALSE 6503.611261 5433.672298 6935.568062 6820.465831 7758.607441 6517.1213 5487.830922 5722.716218 7543.302562 6743.827052 0.9643799 0.805725333 1.028432077 1.011364286 1.150475447 0.96638322 0.813756177 0.848585851 1.118549231 1 12.71935182 -5.27485704 24.72367636 0.985828708 0.885052606 0.142244004 0.104307024 1311.064159 2415796.886 0.029370477 0.061712642 5.31E-06 5.27485704 -0.100776102 S(ph)GGGAGSNGSVLDPAER ddPTM_A459_MK2206_30min_R1 2 SGGGAGSNGSVLDPAER 17 0 Q15149-3;Q15149-2;H0YDN1;E9PMV1 Q15149-3 PLEC Plectin 1 S(1)GGGAGSNGSVLDPAER;S(1)GGGAGSNGSVLDPAER 215.64 1.82E-10 32809000 1511.45 1499.26 1185.23 1246.22 1424.83 1295.09 1693.06 1314.36 993.6 1154.18 TRUE FALSE 1382.893241 1401.657901 1104.77989 1342.20408 1368.076004 1368.416877 1580.119057 1302.868689 1096.888276 1297.168532 1.066086022 1.080551884 0.8516857 1.034718348 1.054663269 1.054926051 1.218129347 1.004394307 0.845601977 1 10.34115022 -8.010211722 24.98223709 0.923533343 1.049333951 0.243362409 0.090003136 697.0479088 1705267.522 0.056276314 0.024377225 9.77E-09 8.010211722 0.125800608 S(ph)GGGAGSNGSVLDPAER ddPTM_A459_MK2206_30min_R2 2 SGGGAGSNGSVLDPAER 17 0 Q15149-3;Q15149-2;H0YDN1;E9PMV1 Q15149-3 PLEC Plectin 1 S(1)GGGAGSNGSVLDPAER;S(0.974)GGGAGS(0.001)NGS(0.025)VLDPAER 211.67 2.66E-09 50864000 29759.5 30161 40660.2 42795 42976 34833.7 39039 27926.6 27630.3 41132.3 TRUE FALSE 32037.9102 28663.2486 42015.79077 39298.51161 41288.5463 36159.32086 33913.13241 31576.70251 30033.53355 39790.15642 0.805171758 0.72036029 1.055934295 0.987644059 1.037657301 0.908750408 0.85229955 0.793580758 0.754798077 1 15.28012395 -7.289457514 3.830058886 0.830461262 0.925567746 0.074565597 0.112297247 0.535422443 17.42015168 0.052202739 0.035572613 5.14E-08 7.289457514 0.095106484 S(ph)GGGDLTLGLEPSEEEAPR ddPTM_A459_MK2206_30min_R1 2 SGGGDLTLGLEPSEEEAPR 19 0 B4DTR1;P04626-3;P04626-2;P04626-5;P04626-4;P04626 B4DTR1 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 1 S(1)GGGDLTLGLEPSEEEAPR;S(1)GGGDLTLGLEPSEEEAPR 171.25 3.04E-09 5910000 1386.2 1334.41 1257.53 1068.94 1602.94 1449.16 1690.88 1470.78 1568.15 1527.27 TRUE FALSE 1268.296411 1247.539666 1172.172367 1151.269944 1539.091506 1531.210187 1578.08448 1457.921126 1731.164804 1716.479738 0.738893902 0.726801278 0.682893215 0.67071572 0.896655796 0.892064237 0.919372624 0.84936693 1.008555339 1 10.74523711 -6.313370685 5.55505428 0.919590771 0.704814337 0.833775435 0.048698958 0.082812011 5.910694944 0.014883776 0.017121649 4.86E-07 6.313370685 -0.214776434 S(ph)GGGDLTLGLEPSEEEAPR ddPTM_A459_MK2206_30min_R2 1 SGGGDLTLGLEPSEEEAPR 19 0 B4DTR1;P04626-3;P04626-2;P04626-5;P04626-4;P04626 B4DTR1 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 1 S(1)GGGDLTLGLEPSEEEAPR 118.72 0.0013248 0 1311.9 2013.6 1079.5 2608 2315.1 2584.3 3802.1 1141.4 2646.2 2566 TRUE FALSE 1412.340073 1913.607552 1115.489991 2394.918057 2224.197542 2682.647347 3302.879703 1290.584899 2876.361693 2482.27163 0.568970799 0.770909811 0.449382726 0.964809019 0.896033099 1.08072272 1.33058754 0.5199209 1.158761861 1 11.27744528 -5.812301736 9.754240911 0.987165109 0.614167816 0.429477162 0.209083884 0.370092271 68.11797668 0.057947528 0.086250408 1.54E-06 5.812301736 -0.372997293 S(ph)GGLQTPECLSR ddPTM_A459_MK2206_30min_R1 1 SGGLQTPECLSR 12 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 S(0.661)GGLQT(0.337)PECLS(0.002)R 103.11 0.010997 14850000 2230 2495 2913.8 2441.8 2324.5 2308.9 2667.2 2797.4 2425.3 2336.1 TRUE FALSE 2040.32679 2332.575047 2716.019374 2629.867859 2231.910243 2439.627923 2489.275955 2772.942627 2677.418614 2625.513705 0.777115269 0.888426155 1.034471604 1.001658401 0.850085162 0.929200224 0.948110059 1.05615241 1.01976943 1 11.35838401 -4.933713881 3.342055628 0.974977431 0.776908314 0.55391789 0.056883737 0.21878203 4.528264412 0.016123286 0.091316165 1.16E-05 4.933713881 -0.198069117 S(ph)GGNEVSIEER ddPTM_A459_MK2206_30min_R2 2 SGGNEVSIEER 11 0 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 S(0.998)GGNEVS(0.002)IEER;S(1)GGNEVSIEER 128.85 0.0026983 47321000 31923 38306 28608 27727.8 26229 45313 31874 21256.6 22095 23483 TRUE FALSE 34367.04942 36403.77974 29561.77644 25462.35004 25199.11767 47037.41797 27688.90551 24034.9106 24016.78316 22716.75163 1.512850516 1.602508155 1.301320581 1.120862281 1.109274692 2.070604932 1.218876095 1.058025857 1.05722788 1 14.47146893 -7.516707749 24.48263238 1.062266141 1.440654574 0.344805878 0.257616076 283.3361339 1124117.56 0.123380506 0.07441271 3.04E-08 7.516707749 0.378388433 S(ph)GGSIDNVLSQIAAQR ddPTM_A459_MK2206_30min_R2 1 SGGSIDNVLSQIAAQR 16 0 H7C163;A0A0A0MRS7;Q68DC2;Q68DC2-4 H7C163 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 1 S(0.997)GGS(0.003)IDNVLSQIAAQR 99.813 0.006348 1636900 5850.4 9421.2 6736.4 8727.8 9144.5 7573.2 9566 6969.2 7728.2 8199.5 TRUE FALSE 6298.311122 8953.356908 6960.988214 8014.710821 8785.440983 7861.403433 8309.972709 7880.098369 8400.384867 7931.950987 0.794043122 1.128771083 0.877588405 1.01043373 1.107601522 0.991105901 1.047658101 0.993462817 1.059056578 1 12.95346005 -4.743500786 24.96378823 1.021090145 0.794042401 0.518913646 0.066362757 931.5500641 1296298.745 0.015821831 0.506157259 1.81E-05 4.743500786 -0.227047744 S(ph)GIDITDFQAK ddPTM_A459_MK2206_30min_R2 2 SGIDITDFQAK 11 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 S(1)GIDITDFQAK;S(1)GIDITDFQAK 119.39 0.0050349 7669800 98054 81181 80745 78628 78840 71072 88891 69160 57849 89674 TRUE FALSE 105561.0896 77149.66959 83436.998 72203.84088 75744.34546 73776.69476 77219.50492 78199.44946 62880.60145 86747.94472 1.216871362 0.889354438 0.961832563 0.832340652 0.873154352 0.850471962 0.890159475 0.901455933 0.724865605 1 16.40454196 S(ph)GKDSEAWVPDSEER ddPTM_A459_MK2206_30min_R2 2 SGKDSEAWVPDSEER 15 1 Q96F63;M0QXS4 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 1 S(0.997)GKDS(0.003)EAWVPDSEER;S(0.993)GKDS(0.007)EAWVPDSEER 92.096 0.0076201 12273100 43237 40985 45466 38771 37695 34701 43917 34045 26942 47121 TRUE FALSE 46547.25796 38949.7445 46981.81375 35603.28528 36214.9049 36021.57087 38150.64515 38494.79839 29285.36646 45583.44563 1.021143911 0.854471266 1.030677104 0.781057351 0.794474933 0.790233612 0.836940793 0.844490755 0.642456182 1 15.47622236 -5.773020074 24.99832298 0.805629189 0.957334816 0.364096325 0.093751227 218.0692824 470728.7884 0.024666038 0.036935034 1.69E-06 5.773020074 0.151705627 S(ph)GLCSPSYVAVTPFSLR ddPTM_A459_MK2206_30min_R1 2 SGLCSPSYVAVTPFSLR 17 0 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1 H0YBT0 MYC Myc proto-oncogene protein 1 S(0.684)GLCS(0.126)PS(0.19)YVAVTPFSLR;S(0.937)GLCS(0.055)PS(0.008)YVAVTPFSLR 151.49 0.00021139 45726000 9111.3 9686.9 9492.3 8921.1 9496.2 7129 6766.1 8505.5 5365.8 4429.1 TRUE FALSE 8336.33609 9056.281049 8847.989123 9608.204668 9117.946245 7532.637819 6314.745814 8431.13731 5923.594112 4977.810346 1.674699418 1.819330272 1.777486185 1.930207059 1.831718288 1.513243233 1.268579029 1.693744182 1.18999996 1 12.28129555 -7.948965921 0.512578133 1.004417257 1.837327257 0.73548597 0.153701234 0.463633833 0.293158871 0.166776679 0.10176549 1.12E-08 7.948965921 0.83291 S(ph)GLCSPSYVAVTPFSLR ddPTM_A459_MK2206_30min_R2 1 SGLCSPSYVAVTPFSLR 17 0 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1 H0YBT0 MYC Myc proto-oncogene protein 1 S(0.997)GLCS(0.003)PSYVAVTPFSLR 249.36 1.77E-30 16753000 25232 43313 35023 40662 44407 35345 36726 26093 37036 36248 TRUE FALSE 27163.78132 41162.1394 36190.64934 37339.78453 42663.35805 36690.07874 31903.83208 29503.44469 40257.32433 35065.23073 0.774664269 1.173873337 1.032095001 1.064866358 1.216685508 1.046337867 0.909842354 0.841387439 1.148069569 1 15.0977536 -7.121136265 6.718239416 0.962292593 1.065598886 0.067451558 0.131786042 0.55210815 28.14371007 0.049410554 0.038239237 7.57E-08 7.121136265 0.103306294 S(ph)GLSDIILGK ddPTM_A459_MK2206_30min_R2 1 SGLSDIILGK 10 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;K7EJR2;M0R330;M0QX30;M0R1V5 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 S(0.518)GLS(0.482)DIILGK 98.04 0.019987 1495100 10741 14259 11271 13330 13918 11764 15060 10274 12180 16203 TRUE FALSE 11563.33922 13550.91879 11646.76951 12240.89636 13371.50939 12211.68726 13082.60391 11616.84708 13239.39438 15674.29744 0.737726157 0.864531176 0.743048903 0.780953431 0.853085087 0.779089928 0.834653289 0.74113989 0.844656319 1 13.93611316 -14.52285419 0.371256832 3.690095265 0.792988084 0.642699796 0.045665347 325.5420052 2.506606438 702.6739421 0.029836599 3.00E-15 14.52285419 -2.897107181 S(ph)GNSDSIER ddPTM_A459_MK2206_30min_R1 1 SGNSDSIER 9 0 A0A5F9ZI51;A0A5F9ZGW5;C9J8U3;A0A0A0MRW7;Q7Z2E3-13;Q7Z2E3-4;Q7Z2E3-5;Q7Z2E3-9;Q7Z2E3-10;Q7Z2E3-11;Q7Z2E3-8;Q7Z2E3-7;Q7Z2E3 A0A5F9ZI51 APTX Aprataxin 1 S(0.999)GNS(0.001)DSIER 104.94 0.010988 0 1820 1938.6 1822.1 1720.9 1157.1 1576.2 1897.8 1704.4 370.16 1698.1 TRUE FALSE 1665.199443 1812.396788 1698.420929 1853.444016 1111.010257 1665.443082 1771.201225 1689.49861 408.6394566 1908.473448 0.872529531 0.949657848 0.889936892 0.971165734 0.582146038 0.872657193 0.928072238 0.885261785 0.214118492 1 10.8982034 -6.440054175 0.637101373 0.726357617 0.934319604 0.089711716 0.217978302 2.228994238 1.981297948 0.15601203 0.240504516 3.63E-07 6.440054175 0.207961986 S(ph)GPIFR ddPTM_A459_MK2206_30min_R2 1 SGPIFR 6 0 A0A087WYN8 A0A087WYN8 1 S(1)GPIFR 91.9 0.044378 2526000 4163.1 5807.1 6422.8 6470.7 7119.2 8334.2 5888.2 2716.9 5704.9 5580.1 TRUE FALSE 4481.830137 5518.727858 6636.932946 5942.023111 6839.664437 8651.363821 5115.072267 3072.008159 6201.10189 5398.021794 0.830272701 1.022361167 1.229512069 1.100777903 1.267068696 1.602691532 0.947582737 0.56909888 1.148773037 1 12.39821509 -7.504335903 24.85096028 0.867029704 1.18033527 0.230000907 0.229777726 926.1291224 1241195.699 0.100195583 0.066167864 3.13E-08 7.504335903 0.313305567 S(ph)GPISPGIHSCDLTVEGLATVTR ddPTM_A459_MK2206_30min_R2 1 SGPISPGIHSCDLTVEGLATVTR 23 0 Q9BUB4-2;Q9BUB4 Q9BUB4-2 ADAT1 tRNA-specific adenosine deaminase 1 1 S(0.528)GPIS(0.47)PGIHS(0.002)CDLTVEGLATVTR 66.282 0.0026672 2455000 8974.3 8052.7 11440 10417 8718.4 9983.7 10827 5415.5 8097.2 9926.1 TRUE FALSE 9661.379308 7652.814628 11821.40389 9565.897778 8376.07181 10363.6367 9405.401894 6123.324444 8801.47982 9602.21217 1.006161824 0.796984538 1.231112548 0.996218122 0.872306471 1.079296782 0.979503653 0.637699348 0.916609596 1 13.2291511 -7.561499675 24.99943242 0.828012729 0.995902773 0.178935091 0.138157977 235.1146103 152187.8486 0.06299944 0.036372828 2.74E-08 7.561499675 0.167890045 S(ph)GRESVSTASDQPSHSLER ddPTM_A459_MK2206_30min_R1 1 SGRESVSTASDQPSHSLER 19 1 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.934)GRES(0.015)VS(0.046)T(0.005)ASDQPSHSLER 133.32 0.00012606 3871800 917.51 752.79 974.85 893.16 892.32 633.17 890.63 652.85 491.95 777.85 TRUE FALSE 839.4709565 703.7832342 908.6798981 961.951338 856.7770049 669.0195382 831.2176977 647.1422013 543.089963 874.2159305 0.960255844 0.805045081 1.039422717 1.100358967 0.980051924 0.765279509 0.950815089 0.740254414 0.621230916 1 9.771845858 -6.752873065 24.42951161 0.807738079 0.977790622 0.305509567 0.121471193 181.2232898 516813.3321 0.041788906 0.041132191 1.77E-07 6.752873065 0.170052543 S(ph)GS(ph)GEIGS(ph)ETSDKK ddPTM_A459_MK2206_30min_R1 1 SGSGEIGSETSDKK 14 1 A0A0C4DGH6;A0JNW5 A0A0C4DGH6 UHRF1BP1L UHRF1-binding protein 1-like 3 S(1)GS(1)GEIGS(1)ETSDKK 74.428 0.036297 4344900 2892.8 895.98 775.63 665.22 4564.7 4804.2 3743.6 2335.8 898.15 674.63 TRUE FALSE 2646.752169 837.6515391 722.9823966 716.4553597 4382.878333 5076.209652 3493.871275 2315.378347 991.5159066 758.2082576 3.490798396 1.104777653 0.953540652 0.944932151 5.780573199 6.695007079 4.608062811 3.053749842 1.30770919 1 9.566450359 -4.473584191 21.67102754 2.999308958 9.242997645 0.003036698 2.069741412 2554.033306 1165058.966 0.560733339 27580.12094 3.36E-05 4.473584191 6.243688688 S(ph)GS(ph)LQIKNRNHMK ddPTM_A459_MK2206_30min_R1 1 SGSLQIKNRNHMK 13 2 A6NHS7 A6NHS7 MANSC4 MANSC domain-containing protein 4 2 S(1)GS(1)LQIKNRNHMK 103.43 0.016045 15244000 1835 590.81 512.74 297.33 2910.6 2855.7 2613.8 1627.7 719.51 614.53 TRUE FALSE 1678.923614 552.3481616 477.9366374 320.2304081 2794.664639 3017.387266 2439.438171 1613.469191 794.3056393 690.6626159 2.430888216 0.799736585 0.691997259 0.463656785 4.046352842 4.36882958 3.53202579 2.336117742 1.150063173 1 9.431837325 -4.472323025 22.41481124 2.142233744 6.353974264 0.002396545 1.398739324 4270.371867 2050429.903 0.38117593 71733.28723 3.37E-05 4.472323025 4.21174052 S(ph)GS(ph)LQIKNRNHMK ddPTM_A459_MK2206_30min_R2 1 SGSLQIKNRNHMK 13 2 A6NHS7 A6NHS7 MANSC4 MANSC domain-containing protein 4 2 S(1)GS(1)LQIKNRNHMK 89.189 0.043066 14310000 3632.9 9365.7 7273.8 17416 14629 21266 6430.9 8769.7 15127 3471.6 TRUE FALSE 3911.037617 8900.612957 7516.304862 15993.05709 14054.59196 22075.29253 5586.515105 9915.929901 16442.71912 3358.321976 1.164580896 2.65031555 2.238113235 4.762216727 4.185004313 6.573310328 1.663484069 2.952644199 4.89611158 1 11.71352484 -5.66426586 7.166547436 3.850266383 2.047023931 0.197292347 1.559511692 0.354205289 22.55300638 0.422041525 0.733593656 2.17E-06 5.66426586 -1.803242452 S(ph)GSELPSILPEIWPK ddPTM_A459_MK2206_30min_R2 2 SGSELPSILPEIWPK 15 0 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 S(0.873)GS(0.127)ELPSILPEIWPK;S(0.997)GS(0.003)ELPSILPEIWPK 207.64 1.79E-06 3448200 12816.8 13645.9 10020.2 12807.3 12669.4 11761.2 10496 9916.6 9768.1 15391.3 TRUE FALSE 13798.06406 12968.26445 10354.26847 11760.90262 12171.9357 12208.78071 9117.862592 11212.73367 10617.71168 14889.08314 0.926723555 0.870991472 0.695426869 0.789901064 0.817507403 0.819982036 0.612385766 0.753084227 0.713120585 1 13.8619673 -5.070859805 5.188392575 0.764458637 0.915275055 0.211210776 0.096390649 0.256760492 12.79174056 0.023639311 0.069371291 8.49E-06 5.070859805 0.150816418 S(ph)GSGNFGGGR ddPTM_A459_MK2206_30min_R2 3 SGSGNFGGGR 10 0 F8W6I7;P09651-2;P09651;F8VZ49;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 S(0.984)GS(0.016)GNFGGGR;S(0.685)GS(0.315)GNFGGGR;S(0.974)GS(0.026)GNFGGGR 103.46 0.011389 15478000 76625.1 100755.4 100312 120861 107796 118261 156868 138351 134288 156544 TRUE FALSE 82491.57657 95752.03335 103656.352 110986.2697 103563.3874 122761.5052 136271.0432 156433.9507 145968.1275 151435.9821 0.544729036 0.632293805 0.684489582 0.732892329 0.683875694 0.810649514 0.899859078 1.033003838 0.963893293 1 17.20834851 -6.992107653 0.751031725 1.026324042 0.61376036 0.920244046 0.045171291 0.179931344 0.212785814 0.036357103 0.028533698 1.02E-07 6.992107653 -0.412563681 S(ph)GSLDDSFSDFQELPASSK ddPTM_A459_MK2206_30min_R2 1 SGSLDDSFSDFQELPASSK 19 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.409)GS(0.295)LDDS(0.295)FSDFQELPASSK 132.9 0.00045607 0 5519.5 6662.5 6532.6 8066.4 5647.9 4403.2 7092.4 6074.3 5038.5 8235.9 TRUE FALSE 5942.077164 6331.649938 6750.393624 7407.349317 5426.135068 4570.766861 6161.15936 6868.231866 5476.739622 7967.163257 0.745820937 0.794718237 0.84727693 0.929734848 0.681062367 0.573700665 0.77331908 0.862067419 0.687414007 1 12.95985042 -10.96014985 3.912468348 1.001451533 0.769035971 0.342458206 0.097146729 153923278.5 3786.065315 2013050.115 0.025377759 1.10E-11 10.96014985 -0.232415562 S(ph)GSPAPETTNESVPFAQHSSLDSR ddPTM_A459_MK2206_30min_R1 1 SGSPAPETTNESVPFAQHSSLDSR 24 0 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 S(0.499)GS(0.499)PAPET(0.001)TNESVPFAQHSSLDSR 208.83 6.41E-32 16817000 2153.5 1428.4 1621.3 979.38 3454.1 3111.5 2986.8 1986.2 1189.4 1229.8 TRUE FALSE 1970.333517 1335.4109 1511.250673 1054.812017 3316.515883 3287.670441 2787.556022 1968.834863 1313.042386 1382.156909 1.425549809 0.966178943 1.093400224 0.763163727 2.399521981 2.378652106 2.016815894 1.424465522 0.949995169 1 10.43270569 -6.243324735 24.94591873 1.766414324 1.057461232 0.275970496 0.494059331 1053.741236 1451120.923 0.155721747 0.200627101 5.71E-07 6.243324735 -0.708953092 S(ph)GSPNLPHSVSSYK ddPTM_A459_MK2206_30min_R1 1 SGSPNLPHSVSSYK 14 0 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 S(0.764)GS(0.236)PNLPHSVSSYK 161.26 0.00028449 13614000 3369.9 2393.2 3007.8 2482 3743.4 2984.5 3499.3 3619.3 2497.6 2112.2 TRUE FALSE 3083.272309 2237.402245 2803.638916 2673.16407 3594.292451 3153.479811 3265.868082 3587.656842 2757.234458 2373.875282 1.298835003 0.942510443 1.181038843 1.126076037 1.514103322 1.328410062 1.37575386 1.511308058 1.161490866 1 11.21302843 -6.220041998 21.75910086 1.344433485 1.126351658 0.203153271 0.166287102 139.9736086 73571.27655 0.046083048 0.059490966 6.03E-07 6.220041998 -0.218081827 S(ph)GSPNLPHSVSSYK ddPTM_A459_MK2206_30min_R2 1 SGSPNLPHSVSSYK 14 0 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 S(0.775)GS(0.225)PNLPHSVSSYK 82.865 0.019161 32692000 60935 94818 85688 109980 106240 94635 123720 84816 97222 85765 TRUE FALSE 65600.23045 90109.476 88544.79515 100994.2822 102068.4838 98236.40124 107475.4154 95901.74242 105678.1938 82966.49507 0.7906834 1.086094765 1.067235576 1.217289969 1.230237383 1.184049069 1.295407445 1.15590929 1.273745429 1 16.34024122 -4.205784155 0.966040309 1.203751576 4.04E-18 0.66605364 0.083179689 2.848990718 0.973090386 0.025148221 4.672672425 6.23E-05 4.205784155 -1.203751576 S(ph)GSS(ph)SPDSEITELKFPSINHD ddPTM_A459_MK2206_30min_R1 1 SGSSSPDSEITELKFPSINHD 21 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 2 S(0.597)GS(0.464)S(0.468)S(0.424)PDS(0.046)EITELKFPSINHD 86.946 0.0019572 2305000 1408.2 1058.8 1153 737.22 1118.3 1140.4 1258.1 781.36 811.16 979.27 TRUE FALSE 1288.425195 989.8719276 1074.737572 794.0008121 1073.755743 1204.968462 1174.174445 774.5286519 895.4829848 1100.589361 1.170668408 0.899401687 0.976510959 0.721432389 0.975618865 1.094839279 1.066859708 0.703739905 0.813639507 1 10.10406057 -7.755933664 24.99960351 0.819017279 0.976299882 0.197871224 0.133032208 207.0651671 940225.6796 0.066393323 0.036933013 1.75E-08 7.755933664 0.157282603 S(ph)GSSPGLR ddPTM_A459_MK2206_30min_R1 1 SGSSPGLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.504)GS(0.248)S(0.248)PGLR 115.49 0.0098151 7393000 2920.4 2851.4 2472.7 2424.4 1985.6 1772.6 2841.2 2928 469.33 1918.1 TRUE FALSE 2672.004644 2665.773342 2304.860013 2611.127708 1906.509347 1872.96308 2651.668732 2902.400805 518.118533 2155.728709 1.239490217 1.236599638 1.069179069 1.211250607 0.884392057 0.868830606 1.230056788 1.346366448 0.240344961 1 11.07395992 -4.979970272 0.30045523 0.874286463 1.524999877 0.167821763 0.278588123 14.4337195 1.172996919 0.324843406 3.43094624 1.05E-05 4.979970272 0.650713415 S(ph)GSSS(ph)PDSEITELK ddPTM_A459_MK2206_30min_R2 1 SGSSSPDSEITELK 14 0 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 2 S(0.991)GS(0.021)S(0.331)S(0.656)PDSEITELK 119.62 0.039793 2906800 19289 13865 15639 12579 14172 9885.2 18409 16277 8714.7 19026 TRUE FALSE 20765.78067 13176.48426 16160.39645 11551.25546 13615.53607 10261.38821 15991.87619 18404.45979 9472.688853 18405.18318 1.128257213 0.715911607 0.878035078 0.627608829 0.739766398 0.55752709 0.868878947 0.999960696 0.514675065 1 14.16782449 -4.757057273 24.97646988 0.761839619 1.128257762 0.309336485 0.161811398 157.908019 899904.7559 0.03868279 0.297060108 1.75E-05 4.757057273 0.366418143 S(ph)GSTSSLSYSTWTSSHSDK ddPTM_A459_MK2206_30min_R1 1 SGSTSSLSYSTWTSSHSDK 19 0 Q9ULD2;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 S(0.335)GS(0.335)T(0.068)S(0.258)S(0.004)LSYSTWTSSHSDK 175.77 6.13E-13 10247000 6407.3 3595.9 4724.3 2862.1 5731.5 4833.4 5224.4 3945.4 3280.2 2716.1 TRUE FALSE 5862.325489 3361.806256 4403.627679 3082.539438 5503.202218 5107.062931 4875.889808 3910.905784 3621.188528 3052.590974 1.920442516 1.101296009 1.442586877 1.009810834 1.802797121 1.673025628 1.597295494 1.281175833 1.186267194 1 11.57581858 -8.225752352 1.993505857 1.031990326 1.484777803 0.276492395 0.270274216 0.466594758 3.35882879 0.252531538 0.074809092 5.95E-09 8.225752352 0.452787477 S(ph)GSTSSLSYSTWTSSHSDK ddPTM_A459_MK2206_30min_R2 3 SGSTSSLSYSTWTSSHSDK 19 0 Q9ULD2;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 S(0.271)GS(0.271)T(0.093)S(0.132)S(0.148)LS(0.032)Y(0.036)S(0.007)T(0.009)WTSSHSDK;S(0.642)GS(0.092)T(0.018)S(0.124)S(0.124)LSYSTWTSSHSDK;S(0.313)GS(0.313)T(0.01)S(0.215)S(0.148)LSYSTWTSSHSDK 176.44 5.71E-13 62332400 93627 181388 126927 233925 140057 154931 169576 104759 89361 84675 TRUE FALSE 100795.1551 172380.5357 131158.6828 214812.5792 134557.6585 160827.0078 147310.4675 118451.361 97133.45825 81912.06168 1.230528851 2.104458515 1.601213303 2.622477994 1.642708725 1.963410571 1.798397751 1.446079595 1.185826071 1 16.32178829 -8.037036968 1.538016852 1.023004004 1.891014313 0.44869456 0.34263916 0.349530523 1.479578346 0.29477138 0.096649759 9.18E-09 8.037036968 0.868010308 S(ph)GTATPQR ddPTM_A459_MK2206_30min_R2 1 SGTATPQR 8 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 S(0.987)GT(0.008)AT(0.005)PQR 80.755 0.045381 4770600 12550 9760.2 9188.3 15829 18564 11319 12925 37510 24730 19781 TRUE FALSE 13510.83765 9275.522661 9494.633336 14535.72007 17835.08408 11749.75248 11227.93197 42412.68579 26880.9707 19135.54759 0.70605963 0.484727318 0.49617777 0.759618715 0.932039389 0.614027502 0.586757809 2.216434392 1.404766212 1 14.22396757 -7.73908945 24.99280204 1.607950285 0.654800335 0.637007824 0.305285956 123.5026849 138107.0815 0.137543958 0.079333959 1.82E-08 7.73908945 -0.95314995 S(ph)GTNSPPPPFSDWGR ddPTM_A459_MK2206_30min_R1 1 SGTNSPPPPFSDWGR 15 0 D6RAU6;D6REP2;D6RAJ6;Q9UKT5-2;Q9UKT5 D6RAU6 FBXO4 F-box only protein 4 1 S(0.952)GT(0.007)NS(0.041)PPPPFSDWGR 184.01 2.10E-05 21119000 2458.4 2688.7 2687.1 2289.6 2757.7 2293 2718.2 2213.7 2370.5 1922.9 TRUE FALSE 2249.30017 2513.665141 2504.707139 2465.945389 2647.854969 2422.827678 2536.873838 2194.345854 2616.921958 2161.123369 1.040801373 1.163128944 1.158983876 1.141047949 1.225221571 1.121096423 1.173868125 1.015372785 1.210908176 1 11.07756572 -11.2124825 7.66509531 0.999416557 1.139706098 0.302432696 0.063292161 0.000604465 2.45E-05 0.058700109 0.014179157 6.13E-12 11.2124825 0.140289541 S(ph)GTPDPR ddPTM_A459_MK2206_30min_R2 1 SGTPDPR 7 0 Q2YD98 Q2YD98 UVSSA UV-stimulated scaffold protein A 1 S(0.5)GT(0.5)PDPR 107.01 0.016879 23856000 88506 29319 42871 57325 83741 51511 70067 356750 164200 96862 TRUE FALSE 95282.08741 27863.06109 44300.29774 52641.36413 80452.90758 53471.2872 60867.11873 403378.4499 178481.8192 93701.40087 1.016869401 0.297360134 0.472781595 0.561799115 0.858609443 0.57065622 0.649586006 4.304935104 1.904793499 1 16.515783 -7.662538789 12.95781752 2.577930866 0.614766567 0.508576704 0.79199989 0.374545468 46.53964073 0.344319814 0.198722491 2.18E-08 7.662538789 -1.963164299 S(ph)GYLLPDTK ddPTM_A459_MK2206_30min_R1 1 SGYLLPDTK 9 0 P14625;H0YIV0 P14625 HSP90B1 Endoplasmin 1 S(1)GYLLPDTK 91.855 0.030958 0 2084.5 2213.4 1870.1 1592.1 1842.1 1758.1 2014 1574.5 1830.5 1614.4 TRUE FALSE 1907.202329 2069.307258 1743.162822 1714.723818 1768.725256 1857.642103 1879.649735 1560.734312 2020.787026 1814.40406 1.051145316 1.140488661 0.960735737 0.945061718 0.974824349 1.023830438 1.035959837 0.860191149 1.113746971 1 10.82528006 -5.267891283 24.97045002 0.985104216 1.09581699 0.296450773 0.06538666 504.8787702 1954012.707 0.016156797 0.035014581 5.40E-06 5.267891283 0.110712775 S(ph)GYRGY(ph)S(ph)GALTLPSISPLQYDGSGR ddPTM_A459_MK2206_30min_R2 1 SGYRGYSGALTLPSISPLQYDGSGR 25 1 A0A1W2PNU3 A0A1W2PNU3 3 S(0.919)GY(0.152)RGY(0.939)S(0.974)GALT(0.008)LPS(0.002)IS(0.002)PLQY(0.003)DGSGR 52.237 0.040595 0 8619.6 11104 9051.5 10967 11521 9490 12258 11296 9597.8 11882 TRUE FALSE 9279.523203 10552.59151 9353.272492 10070.96102 11068.62765 9851.1486 10648.50988 12772.42598 10432.5993 11494.29131 0.807315819 0.918072391 0.813731986 0.876170678 0.962967385 0.857047062 0.926417261 1.111197345 0.907633103 1 13.4886299 -7.532102668 24.90175625 1.009410636 0.877513441 0.476576493 0.062587236 162.7949819 439489.6056 0.027902195 0.016137135 2.94E-08 7.532102668 -0.131897194 S(ph)GYSSPGSPGTPGSR ddPTM_A459_MK2206_30min_R2 1 SGYSSPGSPGTPGSR 15 0 A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636;P10636-9;I3L170;P10636-3;P10636-4;P10636-5;P10636-7;P10636-8;P10636-2;P10636-6 A0A0G2JQJ7;P10636-2 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 S(0.64)GYS(0.175)S(0.052)PGS(0.128)PGT(0.005)PGSR 143.56 0.00037688 2316400 12882 20545 15527 18081 19730 18531 19139 16408 20855 17421 TRUE FALSE 13868.25582 19524.76518 16044.66243 16603.72446 18955.30106 19236.21019 16626.02631 18552.58194 22668.9302 16852.5542 0.822917147 1.158564153 0.952061168 0.985234895 1.124773185 1.141441823 0.986558246 1.100876563 1.345133203 1 14.04067964 -2.765187845 0.373739546 1.126393362 1.61E-17 0.255299439 0.117668943 41.72544827 1.368766346 0.094087325 28.81702963 0.001717166 2.765187845 -1.126393362 S(ph)HEAEVLK ddPTM_A459_MK2206_30min_R1 2 SHEAEVLK 8 0 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 S(1)HEAEVLK;S(1)HEAEVLK 140.78 0.0015345 15489300 16880.1 18428.9 19779.8 16897.3 16325 11998.8 15488.8 18161.7 12880.7 18779.7 TRUE FALSE 15444.35885 17229.17526 18437.20229 18198.73297 15674.74068 12678.16169 14455.57041 18002.91417 14219.69486 21106.27102 0.731742658 0.816305981 0.873541436 0.862242931 0.742657984 0.600682218 0.68489457 0.852965176 0.673718955 1 14.36538409 -1.526328698 24.98846288 0.776376278 0.000999602 0 0.112777158 0 0 0.025971644 0 0.02976263 1.526328698 -0.775376677 S(ph)HEAEVLK ddPTM_A459_MK2206_30min_R2 4 SHEAEVLK 8 0 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 S(1)HEAEVLK;S(1)HEAEVLK;S(1)HEAEVLK;S(1)HEAEVLK 143.4 0.0014249 24795800 172911 250656 175049 263707 293122 215262 273896 182168 163759 181121 TRUE FALSE 186149.1991 238208.7875 180885.0463 242161.2945 281612.5575 223453.9463 237933.1262 205977.9831 178002.4618 175211.0366 1.062428502 1.359553554 1.03238386 1.382112105 1.607276362 1.275341728 1.357980244 1.175599363 1.015931789 1 17.41873413 -8.08833486 2.790808307 1.003478305 1.303117719 0.355067242 0.154352352 0.323483227 4.598635302 0.131435253 0.043104688 8.16E-09 8.08833486 0.299639414 S(ph)HESLLSPCSTVECLDLGR ddPTM_A459_MK2206_30min_R1 1 SHESLLSPCSTVECLDLGR 19 0 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.496)HES(0.496)LLS(0.008)PCSTVECLDLGR 74 0.0067913 2474500 1072 1260.2 992.81 923.38 1246.4 918.24 1173.7 1123.1 1217 1051.1 TRUE FALSE 980.8207707 1178.160751 925.4208233 994.4988876 1196.753249 970.2299553 1095.404615 1113.280855 1343.511505 1181.318203 0.830276523 0.997327179 0.783379805 0.841855213 1.013065951 0.821311271 0.927273119 0.94240557 1.137298571 1 10.20618191 -8.053244851 3.60057097 1.067498306 0.889730802 0.45619139 0.077514275 0.209840609 5.311995508 0.055172192 0.019711658 8.85E-09 8.053244851 -0.177767503 S(ph)HGSPTHVR ddPTM_A459_MK2206_30min_R2 1 SHGSPTHVR 9 0 Q5VT52-5 Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.686)HGS(0.277)PT(0.036)HVR 90.05 0.019221 378950 1827.3 855.79 649.7 2088 2759.5 2528.5 489.35 6465.3 2959.9 742.05 TRUE FALSE 1967.199493 813.292713 671.3606737 1917.403721 2651.148165 2624.723839 425.0977572 7310.336909 3217.346752 717.8369693 2.740454417 1.132976912 0.935255082 2.671085223 3.693245511 3.656434471 0.592192622 10.18384009 4.482002028 1 9.487512415 -6.800995923 0.940547373 4.945613899 1.680365927 0.125483293 2.5148421 0.924830977 1.758014412 1.535827635 1.355082918 1.58E-07 6.800995923 -3.265247972 S(ph)HHAASTTTAPTPAAR ddPTM_A459_MK2206_30min_R1 1 SHHAASTTTAPTPAAR 16 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 S(1)HHAASTTTAPTPAAR 79.347 0.016417 3978600 974.19 385.72 706.1 395.54 727.52 831.39 897 672.51 415.39 523.81 TRUE FALSE 891.3300248 360.6095579 658.1718993 426.0045593 698.5413379 878.4625833 837.1627667 666.630316 458.571277 588.7035374 1.514055833 0.612548651 1.118002284 0.72363173 1.186575744 1.492198581 1.422044737 1.132370155 0.778951115 1 9.201397486 -6.479942006 24.25992327 1.206104695 0.971591997 0.070078319 0.294101228 728.5276821 411629.0665 0.090683898 0.102816102 3.31E-07 6.479942006 -0.234512697 S(ph)HIASPSPCPDR ddPTM_A459_MK2206_30min_R1 1 SHIASPSPCPDR 12 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 S(0.532)HIAS(0.361)PS(0.107)PCPDR 102.07 0.011953 8213700 1547.7 1465.5 1346.9 1289.8 1823.4 2297 2268.8 1558 1425.1 1680.7 TRUE FALSE 1416.059988 1370.095684 1255.476181 1389.140619 1750.770117 2427.054155 2117.452492 1544.37857 1573.244245 1888.917805 0.749667341 0.72533367 0.664653686 0.735416129 0.926864108 1.284891354 1.1209871 0.817599668 0.832881262 1 10.88334421 -6.329163525 3.927653051 1.014594823 0.713517751 0.538887607 0.127504484 0.200277111 6.101008529 0.045560672 0.053119488 4.69E-07 6.329163525 -0.301077071 S(ph)HIASPSPCPDR ddPTM_A459_MK2206_30min_R2 1 SHIASPSPCPDR 12 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 S(0.827)HIAS(0.17)PS(0.003)PCPDR 136.96 0.001364 12608000 31367 41627 31032 47673 47863 49786 51774 33697 44726 50560 TRUE FALSE 33768.48164 39559.86371 32066.59139 43777.9634 45983.65813 51680.64112 44976.01161 38101.3136 48616.18663 48910.23134 0.690417541 0.808825937 0.65562134 0.8950676 0.940164396 1.056642745 0.919562439 0.779004976 0.993988074 1 15.57784867 -5.886187444 5.383091508 0.939111821 0.728505883 0.636105205 0.07753236 0.14437222 6.236793358 0.022699017 0.034249999 1.30E-06 5.886187444 -0.210605938 S(ph)HNNFVAILDLPEGEHQYK ddPTM_A459_MK2206_30min_R1 1 SHNNFVAILDLPEGEHQYK 19 0 Q9Y478 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 S(1)HNNFVAILDLPEGEHQYK 98.552 0.00075235 3060000 1340.6 1528.8 1868 1699.4 1331.5 1696.3 1550.1 1543.6 1491.6 1560.4 TRUE FALSE 1226.57493 1429.274842 1741.205365 1830.288082 1278.463536 1792.34304 1446.695657 1530.104468 1646.657158 1753.714132 0.699415548 0.814998759 0.992867271 1.043663872 0.729003383 1.022026912 0.824932428 0.872493663 0.938954147 1 10.77619788 -4.97135551 3.728384356 0.91995803 0.707630737 0.377594286 0.092806298 0.240694574 7.019616458 0.023236449 0.108218865 1.07E-05 4.97135551 -0.212327292 S(ph)HNNFVAILDLPEGEHQYK ddPTM_A459_MK2206_30min_R2 1 SHNNFVAILDLPEGEHQYK 19 0 Q9Y478 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 S(1)HNNFVAILDLPEGEHQYK 94.01 0.00099237 1040000 3409.1 5376.7 5387.3 6360.3 6493.6 4802.6 6074.3 4597.3 3800.7 5856.1 TRUE FALSE 3670.103317 5109.700896 5566.909893 5840.643144 6238.628636 4985.366308 5276.737113 5198.182895 4131.278016 5665.015937 0.647854015 0.901974673 0.982682124 1.031002068 1.101255267 0.880026882 0.931460242 0.917593693 0.729261499 1 12.4678643 -4.768118661 3.558563593 0.949174936 0.607809989 0.474114263 0.093830891 0.274121855 5.721919803 0.024976143 0.257593439 1.71E-05 4.768118661 -0.341364947 S(ph)HSAGEVGEDSR ddPTM_A459_MK2206_30min_R2 1 SHSAGEVGEDSR 12 0 A0A2R8Y6F3;Q9P2P5;A0A2R8YE75 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 S(0.904)HS(0.096)AGEVGEDSR 154.23 0.00044769 7633500 31529 36859 32853 39017 38115 36906 36384 28187 31412 34043 TRUE FALSE 33942.88448 35028.63566 33948.30262 35829.18629 36618.41359 38310.48369 31606.73709 31871.13768 34144.15898 32932.1797 1.030690492 1.0636598 1.030855016 1.087968869 1.1119341 1.163314547 0.959752357 0.967780996 1.03680228 1 15.00721038 -7.285367564 24.99415494 0.988398986 1.079985748 0.536756655 0.041063005 676.8129434 706960.8461 0.01849244 0.012473989 5.18E-08 7.285367564 0.091586762 S(ph)HSAPSEVGFSDAR ddPTM_A459_MK2206_30min_R2 1 SHSAPSEVGFSDAR 14 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 S(0.55)HS(0.45)APSEVGFSDAR 78.95 0.024504 4287400 21040 30177 28414 33552 39761 37903 39539 29074 32424 31316 TRUE FALSE 22650.83858 28678.45406 29361.30858 30810.69427 38199.78336 39345.42522 34347.48181 32874.07163 35244.18091 30294.16148 0.747696502 0.946666046 0.969206842 1.017050572 1.260961898 1.298779147 1.13379873 1.085161959 1.163398463 1 14.88675215 -5.395127642 1.136598519 1.161718685 0.769904598 0.651720491 0.091079854 0.463472518 0.944968053 0.032544386 0.16909974 4.03E-06 5.395127642 -0.391814087 S(ph)HSDLVR ddPTM_A459_MK2206_30min_R2 1 SHSDLVR 7 0 O60269 O60269 GPRIN2 G protein-regulated inducer of neurite outgrowth 2 1 S(0.555)HS(0.445)DLVR 69.812 0.045415 3750800 1855.6 3673.8 4824 3994.6 5251.3 5259.9 5313.7 3052.7 5246.9 6608.5 TRUE FALSE 1997.666163 3491.364434 4984.829752 3668.228402 5045.107576 5460.06918 4616.004807 3451.698371 5703.265878 6392.865186 0.312483699 0.546134532 0.779748924 0.573800369 0.789177846 0.854087959 0.722055709 0.539929792 0.892129853 1 12.64224696 -4.643159011 1.15478884 0.758807676 1.80E-16 0.551768646 0.130653764 1.649633299 1.507564694 0.039229241 1.636564702 2.27E-05 4.643159011 -0.758807676 S(ph)HSDNDRPNCSWNTQYSSAYYTSR ddPTM_A459_MK2206_30min_R2 3 SHSDNDRPNCSWNTQYSSAYYTSR 24 1 O75494-6;O75494-3 O75494-6 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.383)HS(0.303)DNDRPNCS(0.258)WNT(0.053)QY(0.001)SS(0.001)AYYTSR;S(0.331)HS(0.331)DNDRPNCS(0.331)WNT(0.007)QYSSAYYTSR;S(0.848)HS(0.152)DNDRPNCSWNTQYSSAYYTSR 82.773 0.0036934 32858000 16380.3 24019 8097.4 20568.6 27340.5 23232.2 24940 15486.6 16985.4 12569 TRUE FALSE 17634.38836 22826.25139 8367.363275 18888.07958 26266.9746 24116.31765 21665.34804 17510.75179 18462.75939 12158.87456 1.450330643 1.877332583 0.688169224 1.553439793 2.160312985 1.983433379 1.781854721 1.440162221 1.518459566 1 13.56972208 -5.994968074 24.99815151 1.707812389 1.347203309 0.094225578 0.402578401 287.4228735 1427866.559 0.114786412 0.16960304 1.01E-06 5.994968074 -0.36060908 S(ph)HSGPAGSFNKPAIR ddPTM_A459_MK2206_30min_R2 1 SHSGPAGSFNKPAIR 15 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 S(0.816)HS(0.184)GPAGSFNKPAIR 67.994 0.032291 93666000 23603 37378 21328 38519 40287 41257 39316 29584 29177 30464 TRUE FALSE 25410.06383 35521.86287 22039.06488 35371.87448 38705.12995 42827.06405 34153.76197 33450.73038 31714.76272 29469.96217 0.862236052 1.205358278 0.747848428 1.200268744 1.313375624 1.453244622 1.158934707 1.135078836 1.076172495 1 14.84695759 -4.755005497 24.86927496 1.152487385 0.862235532 0.182829901 0.177361786 378.6224375 1463366.333 0.047173876 0.433710847 1.76E-05 4.755005497 -0.290251853 S(ph)HSLSQHTATSSK ddPTM_A459_MK2206_30min_R2 1 SHSLSQHTATSSK 13 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 S(0.493)HS(0.493)LS(0.013)QHTATSSK 71.286 0.038581 1427700 4374.6 15001 7453.2 21728 18668 22548 17612 12123 9834.6 13351 TRUE FALSE 4709.522739 14256.07215 7701.685968 19952.7529 17935.00052 23406.07994 15299.52324 13707.51772 10689.99573 12915.35796 0.364645158 1.103807745 0.596319977 1.544885783 1.388656867 1.812267225 1.184599241 1.061334712 0.827696434 1 13.65680001 -5.753607209 24.99959135 1.287715793 0.729812546 0.403518712 0.316037919 189.5179769 604917.7637 0.089699843 0.151782072 1.76E-06 5.753607209 -0.557903248 S(ph)HSPSASQSGSQLR ddPTM_A459_MK2206_30min_R2 1 SHSPSASQSGSQLR 14 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.591)HS(0.406)PS(0.001)AS(0.001)QSGSQLR 113.43 0.0032969 6036000 1001.6 2463.9 714.73 4374.6 3732.1 2490 2258 2070.6 1981.6 2200.2 TRUE FALSE 1078.283266 2341.546309 738.5587415 4017.181186 3585.559002 2584.758695 1961.521888 2341.234529 2153.955986 2128.407654 0.506615011 1.100139959 0.347000604 1.887411548 1.684620423 1.214409603 0.921591258 1.099993474 1.012003496 1 11.05555878 -5.743353383 24.99986875 1.265862851 0.696140809 0.398218811 0.341544587 284.2078524 392851.1185 0.098619159 0.170377368 1.81E-06 5.743353383 -0.569722041 S(ph)HSPSIDGTPK ddPTM_A459_MK2206_30min_R2 2 SHSPSIDGTPK 11 0 Q9BWT3-2;Q9BWT3;A0A0C4DH56 Q9BWT3-2 PAPOLG Poly(A) polymerase gamma 1 S(0.752)HS(0.247)PS(0.002)IDGTPK;S(0.894)HS(0.1)PS(0.006)IDGTPK 100.02 0.011032 18658500 148940 177043 156999 205990 172300 147014 213451 158712 139049 184228 TRUE FALSE 160342.9609 168251.3021 162233.2683 189159.9581 165534.6363 152608.7208 185424.6273 179456.2033 151143.2307 178216.6554 0.899708058 0.944082929 0.910314852 1.061404489 0.928839316 0.856310093 1.040444996 1.006955286 0.848087011 1 17.44327265 -1.522892587 0.006547588 1.829439079 1.22E-05 0.036622706 0.06946256 129880.6734 66.02382616 8370.091928 10157.25642 0.029999044 1.522892587 -1.82942688 S(ph)HSQASLAGPGPVDPSNR ddPTM_A459_MK2206_30min_R2 1 SHSQASLAGPGPVDPSNR 18 0 A6PVU7;Q9P2M7-2;Q9P2M7;A2A3M4 A6PVU7 CGN Cingulin 1 S(0.555)HS(0.443)QAS(0.002)LAGPGPVDPSNR 89.392 0.0040625 4817800 19182 27183 15072 24222 28354 27059 27255 22223 17754 25872 TRUE FALSE 20650.58867 25833.13175 15574.49296 22242.98512 27240.67949 28088.74921 23676.38576 25127.6224 19298.21083 25027.79876 0.82510607 1.03217754 0.622287765 0.88873118 1.088416914 1.122302024 0.946003521 1.003988511 0.77107104 1 14.61124379 -6.010615397 24.75367606 0.99294493 0.831825902 0.251412082 0.127099794 650.5113663 1516911.673 0.037196126 0.051412116 9.76E-07 6.010615397 -0.161119028 S(ph)HSSPASLQLGTGAGAAGSPAQQHAHLR ddPTM_A459_MK2206_30min_R1 2 SHSSPASLQLGTGAGAAGSPAQQHAHLR 28 0 Q9GZV5;C9JR84;C9J038 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 1 S(0.339)HS(0.339)S(0.253)PAS(0.068)LQLGTGAGAAGSPAQQHAHLR;S(0.299)HS(0.299)S(0.183)PAS(0.204)LQLGT(0.015)GAGAAGSPAQQHAHLR 76.749 4.78E-05 10551000 3586.4 3303.2 3295.6 2816.67 4399.2 3510 3874 3415.8 2941.1 2627.82 TRUE FALSE 3281.357847 3088.16108 3071.903854 3033.610411 4223.970549 3708.733167 3615.572529 3385.936021 3246.83787 2953.374181 1.111053882 1.045638274 1.040133646 1.027167648 1.430218553 1.255761356 1.224217558 1.146463609 1.099365563 1 11.52814844 S(ph)HSSPASLQLGTGAGAAGSPAQQHAHLR ddPTM_A459_MK2206_30min_R2 4 SHSSPASLQLGTGAGAAGSPAQQHAHLR 28 0 Q9GZV5;C9JR84;C9J038 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 1 S(0.328)HS(0.328)S(0.328)PAS(0.017)LQLGTGAGAAGSPAQQHAHLR;S(0.308)HS(0.308)S(0.308)PAS(0.075)LQLGTGAGAAGSPAQQHAHLR;S(0.328)HS(0.328)S(0.328)PAS(0.016)LQLGTGAGAAGSPAQQHAHLR;S(0.308)HS(0.308)S(0.308)PAS(0.075)LQLGTGAGAAGSPAQQHAHLR 156.7 1.80E-17 106466000 52885.1 158200 81336.5 205542 200575 294128 193213 125166 200865 155029 TRUE FALSE 56934.02392 150344.018 84048.21831 188748.5611 192699.4177 305321.2471 167843.901 141525.626 218335.8746 149970.4164 0.379635033 1.002491169 0.560431986 1.258571961 1.284916201 2.035876504 1.119180069 0.943690291 1.455859628 1 17.19431841 -5.808227 6.559969898 1.323168178 0.683281875 0.46275475 0.32084027 0.17854553 18.19880729 0.092789977 0.14063609 1.56E-06 5.808227 -0.639886303 S(ph)HSSSEAYEPR ddPTM_A459_MK2206_30min_R2 1 SHSSSEAYEPR 11 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 S(0.906)HS(0.09)S(0.003)S(0.001)EAYEPR 87.713 0.035927 0 4523.5 4986.3 3673.5 4364.2 5764.7 5241.9 5878.6 5758 4481.5 5044 TRUE FALSE 4869.822638 4738.687593 3795.972657 4007.6309 5538.348913 5441.384178 5106.732759 6510.59037 4871.292769 4879.414693 0.998034179 0.97115902 0.777956557 0.821334351 1.135043701 1.115171495 1.046587158 1.334297406 0.998335472 1 12.25249239 -6.269647477 24.60746025 1.1192181 0.889611992 0.480432912 0.107777931 407.1582539 1220637.69 0.03338907 0.038511893 5.37E-07 6.269647477 -0.229606108 S(ph)HSVPENMVEPPLSGR ddPTM_A459_MK2206_30min_R2 6 SHSVPENMVEPPLSGR 16 0 A1L390-3;A1L390;G3V311;A1L390-2 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(0.88)HS(0.12)VPENMVEPPLSGR;S(0.997)HS(0.003)VPENMVEPPLSGR;S(0.863)HS(0.137)VPENMVEPPLSGR;S(0.892)HS(0.108)VPENMVEPPLSGR;S(0.873)HS(0.127)VPENMVEPPLSGR;S(0.899)HS(0.101)VPENMVEPPLSGR 157.84 7.33E-05 36351800 180134 216075 177170.4 232639 257742 216122 231088 164994.1 194420 230528 TRUE FALSE 193925.1975 205345.0297 183077.1727 213631.6495 247621.754 224346.6742 200745.868 186559.3954 211330.3002 223005.8902 0.869596751 0.920805408 0.820952184 0.957964156 1.110382124 1.006012325 0.900181909 0.83656712 0.947644477 1 17.76672229 -5.848430807 8.970801103 0.964050811 0.875670387 0.273799722 0.070818034 0.454650762 42.20272857 0.022638998 0.033667328 1.42E-06 5.848430807 -0.088380423 S(ph)HTSEGAHLDITPNSGAAGNSAGPK ddPTM_A459_MK2206_30min_R1 3 SHTSEGAHLDITPNSGAAGNSAGPK 25 0 E5RJY1;E7ESM1;Q92597-3;Q92597-2;Q92597 E5RJY1 NDRG1 Protein NDRG1 1 S(0.354)HT(0.323)S(0.323)EGAHLDITPNSGAAGNSAGPK;S(0.634)HT(0.177)S(0.188)EGAHLDITPNSGAAGNSAGPK;S(0.807)HT(0.145)S(0.047)EGAHLDITPNSGAAGNSAGPK 118.85 4.04E-08 30828800 4211.2 4547.8 5004.8 5169.8 15555.2 17442.8 16541.4 13358.5 8243 8239.3 TRUE FALSE 3853.015326 4251.737393 4665.08812 5567.978892 14935.60345 18430.39626 15437.95339 13241.70804 9099.889348 9260.046688 0.41609027 0.459148591 0.503786674 0.601290585 1.612908007 1.990313536 1.667157187 1.42998286 0.982704478 1 13.17680375 -6.214630955 5.283990803 1.507483348 0.480913348 0.724291625 0.286701061 0.109794873 7.390739767 0.090956671 0.116598487 6.10E-07 6.214630955 -1.02657 S(ph)HTSEGAHLDITPNSGAAGNSAGPK ddPTM_A459_MK2206_30min_R2 2 SHTSEGAHLDITPNSGAAGNSAGPK 25 0 E5RJY1;E7ESM1;Q92597-3;Q92597-2;Q92597 E5RJY1 NDRG1 Protein NDRG1 1 S(0.736)HT(0.216)S(0.049)EGAHLDITPNSGAAGNSAGPK;S(0.755)HT(0.188)S(0.058)EGAHLDITPNSGAAGNSAGPK 111.93 9.99E-08 42710000 14962.1 32938 30220 90080 110925 149117 134224 88269 87034 151947 TRUE FALSE 16107.60988 31302.34682 31227.51972 82720.17585 106569.5271 154791.7519 116600.2276 99806.06137 94604.06 146988.9818 0.109583791 0.212957097 0.212448031 0.562764466 0.725017112 1.053084047 0.793258284 0.679003692 0.643613275 1 17.16534849 -5.924753889 1.960070684 0.81382755 0.157480195 0.844588357 0.122671944 0.130743084 1.019227513 0.041405476 0.070633457 1.19E-06 5.924753889 -0.656347355 down S(ph)HTSLKDELSDVSQGGSK ddPTM_A459_MK2206_30min_R2 1 SHTSLKDELSDVSQGGSK 18 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9 A0A087X2D8 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.333)HT(0.333)S(0.333)LKDELSDVSQGGSK 50.966 0.038769 9507400 57805 57765 54932 45606 58791 43113 68438 52963 40682 61764 TRUE FALSE 62230.59524 54896.4741 56763.40546 41879.84391 56482.56994 44753.69543 59452.00839 59885.44595 44220.44682 59748.64574 1.041539845 0.918790266 0.950036687 0.700933777 0.945336405 0.7490328 0.995035246 1.002289595 0.740107935 1 15.86661839 -4.679410635 1.711612469 0.880157613 1.125223444 0.15547409 0.109601204 2.347145149 5.62124857 0.029377032 1.028247208 2.09E-05 4.679410635 0.245065831 S(ph)IDDLEEK ddPTM_A459_MK2206_30min_R1 2 SIDDLEEK 8 0 P09493-3;P09493-9;Q6ZN40;P09493-2;H7BYY1;P09493-8;P09493-7 P09493-3 TPM1 Tropomyosin alpha-1 chain 1 S(1)IDDLEEK;S(1)IDDLEEK 113.93 0.010539 10912100 4769.5 5207.7 4965.4 4960 3666.6 3474.9 3842.1 4164.8 4730.2 4493.2 TRUE FALSE 4363.828979 4868.677783 4628.362482 5342.020059 3520.551558 3671.645835 3585.800519 4128.387593 5221.921217 5049.851538 0.864149955 0.964122954 0.916534367 1.057856854 0.697159418 0.727079956 0.710080384 0.817526528 1.034074206 1 12.30202526 -4.411487692 13.54683758 0.868463631 0.726623959 0 0.130028572 11487974.53 19347180.78 0.034617222 48617353.01 3.88E-05 4.411487692 -0.141839672 S(ph)IDDLEEK ddPTM_A459_MK2206_30min_R2 4 SIDDLEEK 8 0 P09493-3;P09493-9;Q6ZN40;P09493-2;H7BYY1;P09493-8;P09493-7 P09493-3 TPM1 Tropomyosin alpha-1 chain 1 S(1)IDDLEEK;S(1)IDDLEEK;S(1)IDDLEEK;S(1)IDDLEEK 144.77 0.0020674 27383400 137809 110825 102417 102758 114503 76016 124049 85130 79276 112091 TRUE FALSE 148359.763 105321.5917 105831.5317 94362.34269 110007.0369 78908.84215 107761.2173 96256.78329 86171.28318 108433.4798 1.368209922 0.971301408 0.976004199 0.870232541 1.014511727 0.72771659 0.993800231 0.887703534 0.794692592 1 16.72645075 S(ph)IDQDYER ddPTM_A459_MK2206_30min_R2 1 SIDQDYER 8 0 Q9UDY2-7;Q9UDY2-4;A0A3B3IU51;A0A1B0GTW1;A0A2R8YDH4;A0A3B3ITE1;Q9UDY2-2;Q9UDY2-6;Q9UDY2-3;Q9UDY2;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3ISZ5;A0A3B3IRI3 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(1)IDQDYER 86.014 0.034466 17373000 48448 62834 60766 50247 50516 66999 70676 74554 43708 64922 TRUE FALSE 52157.21613 59713.75493 62791.90811 46141.65937 48532.48802 69548.69389 61396.1563 84298.46378 47509.64283 62803.60046 0.830481306 0.950801459 0.999813827 0.734697677 0.772766014 1.107399789 0.977589754 1.342255271 0.756479604 1 15.93855965 -6.768518886 24.95237762 1.054438658 0.863944097 0.249746631 0.153438876 220.0878429 775714.9073 0.052132965 0.046942731 1.70E-07 6.768518886 -0.190494561 S(ph)IDST(ph)KSRS(ph)R ddPTM_A459_MK2206_30min_R1 1 SIDSTKSRSR 10 2 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 3 S(0.609)IDS(0.461)T(0.93)KS(0.026)RS(0.974)R 112.02 0.011271 0 0 0 0 0 0 56.964 63.061 0 0 0 TRUE FALSE 0 0 0 0 0 60.18925245 58.85431575 0 0 0 0 S(ph)IEDDEEGHLICQSGDVLR ddPTM_A459_MK2206_30min_R1 2 SIEDDEEGHLICQSGDVLR 19 0 A0A087WX74;B7ZL31;Q9HAZ1 A0A087WX74;Q9HAZ1 CLK4 Dual specificity protein kinase CLK4 1 S(1)IEDDEEGHLICQSGDVLR;S(1)IEDDEEGHLICQSGDVLR 137.43 0.0001066 28468000 2273.31 2171.54 2627.12 1980.16 2187.44 1749.25 2262.56 2100.55 2195.96 1659.34 TRUE FALSE 2079.953047 2030.172351 2448.798414 2132.672266 2100.309633 1848.291023 2111.628751 2082.185113 2424.2379 1864.911567 1.11530921 1.088615883 1.313090904 1.143578229 1.126224788 0.991087758 1.132294307 1.116506085 1.299921103 1 10.8648915 -6.168980235 4.304042165 1.11191614 1.17229287 0.072375673 0.096714815 0.683870156 22.36196944 0.029724924 0.038862808 6.78E-07 6.168980235 0.06037673 S(ph)IEDDEEGHLICQSGDVLR ddPTM_A459_MK2206_30min_R2 2 SIEDDEEGHLICQSGDVLR 19 0 A0A087WX74;B7ZL31;Q9HAZ1 A0A087WX74;Q9HAZ1 CLK4 Dual specificity protein kinase CLK4 1 S(1)IEDDEEGHLICQSGDVLR;S(1)IEDDEEGHLICQSGDVLR 124.21 0.00026923 19678400 23909.4 24647.2 23175.7 29041.7 29201.8 25808.3 28930.7 21196.4 22812.1 29002.7 TRUE FALSE 25739.92205 23423.25589 23948.36627 26668.90021 28055.1906 26790.45294 25132.06434 23966.84226 24796.25522 28056.34427 0.917436776 0.834864858 0.853581138 0.950547938 0.99995888 0.954880389 0.89577117 0.854239669 0.883802073 1 14.77603942 -5.756708561 24.99839646 0.930102104 0.865251306 0.272721513 0.048639441 177.1047627 935836.0731 0.014677935 0.024380783 1.75E-06 5.756708561 -0.064850798 S(ph)IEDLHR ddPTM_A459_MK2206_30min_R1 2 SIEDLHR 7 0 Q96PY5-3;Q96PY5 Q96PY5-3 FMNL2 Formin-like protein 2 1 S(1)IEDLHR;S(1)IEDLHR 175.91 4.34E-07 58716000 11367.6 10776 10236.9 10317.5 11246.2 9974.8 11295.3 10622.6 10098.9 9944 TRUE FALSE 10400.72593 10074.48044 9542.04775 11112.15564 10798.24004 10539.56456 10541.81115 10529.72773 11148.71679 11175.93779 0.930635632 0.901443854 0.853802869 0.994292903 0.966204379 0.943058627 0.943259648 0.942178448 0.997564321 1 13.44810828 -4.752270665 0.162604024 1.014314145 0.80120167 0.39222532 0.034028596 24.31842267 0.687589156 0.140157101 1.104886117 1.77E-05 4.752270665 -0.213112475 S(ph)IEDLHR ddPTM_A459_MK2206_30min_R2 4 SIEDLHR 7 0 Q96PY5-3;Q96PY5 Q96PY5-3 FMNL2 Formin-like protein 2 1 S(1)IEDLHR;S(1)IEDLHR;S(1)IEDLHR;S(1)IEDLHR 180.03 5.84E-07 112223000 196736 221742 210617 204947 187180 215828 228853 159668 218898 192393 TRUE FALSE 211798.2594 210730.6147 217638.8657 188202.1745 179830.3727 224041.4858 198804.3262 180537.1558 237937.3524 186115.2322 1.1379953 1.132258828 1.169376967 1.011213173 0.966231354 1.203778343 1.068178697 0.97002891 1.278441047 1 17.50583661 -5.743363282 24.97492325 1.07090965 1.145115222 0.115682456 0.095531028 554.1475355 765634.6501 0.0253882 0.043858324 1.81E-06 5.743363282 0.074205571 S(ph)IELEHFEER ddPTM_A459_MK2206_30min_R2 2 SIELEHFEER 10 0 G5E9L9;Q8N568-2;Q8N568;A0A0U1RR70;Q8N568-3 G5E9L9 DCLK2 Serine/threonine-protein kinase DCLK2 1 S(1)IELEHFEER;S(1)IELEHFEER 104.17 0.0088865 3035000 8643.8 7708.8 8841.3 10467.1 8553.5 11411.9 10032.4 8771.4 8304.4 9653.2 TRUE FALSE 9305.575974 7325.992202 9136.064529 9611.904447 8217.646612 11846.18785 8715.133829 9917.852097 9026.701701 9338.216875 0.99650459 0.784517248 0.978352147 1.029308333 0.880001688 1.26857065 0.933276015 1.062071296 0.966640829 1 13.18893138 -5.496081534 11.69777158 1.02198307 0.888191086 0.183490603 0.107944418 1.631378069 706.8737716 0.027026015 0.05473808 3.19E-06 5.496081534 -0.133791984 S(ph)IEVENDFLPVEK ddPTM_A459_MK2206_30min_R1 5 SIEVENDFLPVEK 13 0 Q5JPT2;Q96B97-2;Q96B97;Q5JPT1;Q5VSN0 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK 221.78 9.12E-09 151925000 18149.6 20331.8 21207.6 19409.2 20537.6 17913.2 20822.5 18035.9 17805.3 16332.8 TRUE FALSE 16605.88121 19008.19612 19768.0872 20904.09995 19719.5439 18927.4299 19433.46902 17878.21403 19656.22465 18356.23057 0.904645491 1.035517398 1.0769143 1.138801339 1.074269787 1.031117463 1.058685167 0.973958894 1.070820318 1 14.16398221 -10.33306333 14.93601715 0.999995123 1.043630968 0.036753669 0.06038492 0 0 0.060588832 0.01469495 4.64E-11 10.33306333 0.043635845 S(ph)IEVENDFLPVEK ddPTM_A459_MK2206_30min_R2 5 SIEVENDFLPVEK 13 0 Q5JPT2;Q96B97-2;Q96B97;Q5JPT1;Q5VSN0 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK 201.4 1.24E-14 21513500 208297.5 259793 243260 261396 261570 229411.4 267405 213465.8 225806.4 244048 TRUE FALSE 224244.9168 246892.0574 251370.167 240039.1106 251299.4475 238141.8116 232294.4023 241366.513 245446.6325 236084.7337 0.94984929 1.045777308 1.064745539 1.01674982 1.064445987 1.008713303 0.983945038 1.022372388 1.039654825 1 17.84894523 -9.353899855 15.36301857 1.000000341 1.023397349 0.034359578 0.033743881 0 0 0.032762478 0.007946068 4.43E-10 9.353899855 0.023397008 S(ph)IGASPNPFSVHTATAVPSGK ddPTM_A459_MK2206_30min_R1 1 SIGASPNPFSVHTATAVPSGK 21 0 A0A087WU64;A6NMQ1;P09884 A0A087WU64 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit 1 S(0.938)IGAS(0.062)PNPFSVHTATAVPSGK 103.36 0.00012376 10909000 4420.8 1345.1 2491.5 1653.2 4842.2 4077.5 4124.7 3689.5 1828.7 1555.2 TRUE FALSE 4044.787745 1257.533746 2322.383922 1780.52975 4649.32492 4308.364526 3849.548789 3657.24309 2018.799909 1747.869917 2.314124012 0.719466439 1.3286938 1.018685506 2.659994817 2.464922866 2.202422933 2.092400043 1.15500581 1 10.7713821 -4.470497191 23.11542476 1.697808362 12.32854365 0.08184216 0.652746762 1425.455073 636794.5771 0.169054221 9366.782603 3.38E-05 4.470497191 10.63073529 S(ph)IGSAVDQGNESIVAK ddPTM_A459_MK2206_30min_R1 4 SIGSAVDQGNESIVAK 16 0 Q9H0H5;F8VRD2;F8W1E5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 S(0.995)IGS(0.005)AVDQGNESIVAK;S(1)IGSAVDQGNESIVAK;S(1)IGSAVDQGNESIVAK;S(1)IGSAVDQGNESIVAK 281.65 1.14E-62 58769200 8217 7971.5 6476.48 6047.36 6336.1 7007.5 6396.11 5843.22 5368.35 5696.23 TRUE FALSE 7518.101001 7452.553901 6036.874582 6513.128715 6083.71972 7404.258594 5969.437172 5792.133344 5926.409193 6401.921977 1.174350613 1.164111954 0.942978469 1.017370836 0.950295824 1.156568078 0.932444537 0.904749131 0.925723434 1 12.64428938 -5.253238029 24.29196206 0.980422118 1.169231334 0.556935479 0.067939778 313.6714881 929069.3601 0.018150329 0.046221384 5.58E-06 5.253238029 0.188809215 S(ph)IGSAVDQGNESIVAK ddPTM_A459_MK2206_30min_R2 2 SIGSAVDQGNESIVAK 16 0 Q9H0H5;F8VRD2;F8W1E5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 S(1)IGSAVDQGNESIVAK;S(0.999)IGS(0.001)AVDQGNESIVAK 324.45 7.68E-118 55111000 133270 106355 107792 100116 110330 116076 121903 87349 103705 118955 TRUE FALSE 143473.2537 101073.5654 111385.7315 91936.20254 105997.8898 120493.3535 105896.9897 98765.81421 112725.0734 115073.5081 1.246796557 0.878339133 0.967952862 0.79893456 0.921131993 1.047098985 0.920255161 0.858284551 0.979591874 1 16.81219621 -4.756251891 24.99390575 0.925888288 1.246797058 0.653072322 0.069167115 100.2921205 483165.3604 0.017197177 0.141767049 1.75E-05 4.756251891 0.32090877 S(ph)IGSDSQGR ddPTM_A459_MK2206_30min_R2 1 SIGSDSQGR 9 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 S(1)IGSDSQGR 111.27 0.010373 7910800 12358 11551 10942 19607 15539 14575 15694 15237 15974 17828 TRUE FALSE 13304.13798 10977.39414 11306.80082 18005.04538 14928.86078 15129.66184 13633.35895 17228.52822 17363.38965 17246.27382 0.771421011 0.636508167 0.655608332 1.043996261 0.86562819 0.877271345 0.790510408 0.998971047 1.00679079 1 14.07399707 -5.106719063 0.328323745 1.000752492 0.473862598 0.476002481 0.102070865 5.292338833 0.543364299 0.115124386 1.095202018 7.82E-06 5.106719063 -0.526889894 S(ph)IGVSNFNHR ddPTM_A459_MK2206_30min_R1 2 SIGVSNFNHR 10 0 P52895;B4DK69;S4R3P0 P52895 AKR1C2 Aldo-keto reductase family 1 member C2 1 S(1)IGVSNFNHR;S(1)IGVSNFNHR 133.88 0.0014529 7128400 6905.3 7237.7 7150.8 6133.1 6225.7 6107.1 5893 5615.2 5817.1 5533 TRUE FALSE 6317.967974 6766.524414 6665.423619 6605.472425 5977.717186 6452.878724 5499.888722 5566.106898 6421.808362 6218.469812 1.016000425 1.088133354 1.071875207 1.06223438 0.961284266 1.037695594 0.884444066 0.895092694 1.03269913 1 12.6023439 -6.445074576 1.50715059 0.953011323 1.064797706 0.402933747 0.051929771 0.36344715 1.67183311 0.020588496 0.024233933 3.59E-07 6.445074576 0.111786384 S(ph)IGVSNFNHR ddPTM_A459_MK2206_30min_R2 3 SIGVSNFNHR 10 0 P52895;B4DK69;S4R3P0 P52895 AKR1C2 Aldo-keto reductase family 1 member C2 1 S(1)IGVSNFNHR;S(1)IGVSNFNHR;S(1)IGVSNFNHR 139.89 0.00097803 19987900 92253 121263 88351 137644 111240 111619 146546 124296 99561 126214 TRUE FALSE 99315.96061 115241.2558 91296.57824 126398.0449 106872.1587 115866.7393 127304.3342 140541.914 108220.6358 122095.6475 0.813427527 0.943860474 0.747746378 1.035237926 0.875315057 0.948983372 1.042660707 1.151080459 0.88635949 1 16.89765225 -6.540739377 0.932614666 1.028807406 0.85711191 0.317160197 0.093381671 0.647528266 1.227588609 0.049516386 0.057741093 2.88E-07 6.540739377 -0.171695497 S(ph)IHEVDISNLEAALR ddPTM_A459_MK2206_30min_R1 3 SIHEVDISNLEAALR 15 0 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR 173.19 3.40E-05 20624100 1509.93 1518.5 1537.89 1314.88 1711.18 1375.79 1896.72 1356.37 1333.68 1283.78 TRUE FALSE 1381.502525 1419.645374 1433.502312 1416.152285 1643.020077 1453.686041 1770.19327 1344.5114 1472.320809 1442.824358 0.957498753 0.983934992 0.993539029 0.981513985 1.138752661 1.00752807 1.2268945 0.931860758 1.020443549 1 10.49467997 -6.072165311 24.9944862 1.057408693 0.980324969 0.186083125 0.076787694 248.4998961 86066.98431 0.022375841 0.028887104 8.47E-07 6.072165311 -0.077083723 S(ph)IHEVDISNLEAALR ddPTM_A459_MK2206_30min_R2 4 SIHEVDISNLEAALR 15 0 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR 213.71 3.17E-07 28079800 37472.7 40665.6 38632.7 43081.5 39446.2 35034 38724.3 31304.2 32194.5 40335.8 TRUE FALSE 40341.63872 38646.20544 39920.69494 39561.60364 37897.34399 36367.24342 33639.75289 35395.76642 34994.71942 39019.64615 1.033880178 0.990429418 1.023092182 1.013889349 0.971237511 0.932023916 0.862123474 0.907126792 0.896848713 1 15.25191307 -6.634146651 2.214281394 0.908019938 1.013921594 0.626531957 0.03459577 0.179654828 1.797638454 0.012333739 0.012346781 2.32E-07 6.634146651 0.105901657 S(ph)IKYDSLLEQGLVEAALVSK ddPTM_A459_MK2206_30min_R1 1 SIKYDSLLEQGLVEAALVSK 20 1 O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7;O96028-5 O96028-3;O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 S(0.995)IKYDS(0.005)LLEQGLVEAALVSK 139 4.41E-05 2370500 1575.9 1974.6 1814.7 1275.7 1539.1 1121.2 1410.8 1390.3 1725.7 1595.2 TRUE FALSE 1441.86143 1846.053181 1691.52322 1373.954635 1477.794388 1184.681375 1316.688106 1378.144754 1905.09269 1792.825419 0.804239729 1.029689317 0.943495782 0.766362759 0.824282371 0.660790149 0.734420704 0.768699919 1.062620303 1 10.80801929 -5.751129487 24.9539485 0.809988407 0.936196426 0.089088385 0.125664997 369.074172 893294.4734 0.034027158 0.058098642 1.77E-06 5.751129487 0.126208019 S(ph)ILPYPVSPK ddPTM_A459_MK2206_30min_R1 1 SILPYPVSPK 10 0 Q8IWI9;Q8IWI9-3;H3BP52;H3BTF4 Q8IWI9 MGA MAX gene-associated protein 1 S(0.921)ILPYPVS(0.079)PK 152.04 0.00064887 51328000 10704 14682 11947 13068 7566.4 7753.8 7687.8 7520.6 10060 7205.4 TRUE FALSE 9793.568591 13726.19913 11136.07093 14074.49962 7265.014266 8192.813455 7174.960889 7454.848187 11105.773 8098.05935 1.209372291 1.694998584 1.375153039 1.73800895 0.897130282 1.011700841 0.886009917 0.920572185 1.371411658 1 12.9833605 -6.2700606 24.93099134 1.003937866 1.508767876 0.613714217 0.190289658 384.5786957 1112129.269 0.056301487 0.064828558 5.37E-07 6.2700606 0.50483001 S(ph)ILSPGGSCGPIK ddPTM_A459_MK2206_30min_R2 1 SILSPGGSCGPIK 13 0 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347;P78347-5 A0A494C1K3 GTF2I General transcription factor II-I 1 S(0.814)ILS(0.186)PGGSCGPIK 140.45 0.00088086 110690000 41655 38746 36519 44302 45343 36604 44720 37867 31599 39434 TRUE FALSE 44844.13883 36821.92998 37736.52523 40682.38488 43562.60599 37996.99087 38848.21028 42816.34692 34347.4239 38147.27181 1.175552974 0.965257232 0.989232609 1.066455947 1.141958623 0.996060506 1.018374537 1.122396043 0.900390048 1 15.21929226 -8.267962024 24.98980462 0.950195027 1.053440163 0.277066184 0.070038076 765.5944342 2933131.928 0.060843836 0.017232611 5.40E-09 8.267962024 0.103245136 S(ph)IMAEPDY(ph)IEDDNPELIR ddPTM_A459_MK2206_30min_R1 1 SIMAEPDYIEDDNPELIR 18 0 Q9H098-2 Q9H098-2 2 S(1)IMAEPDY(1)IEDDNPELIR 83.226 0.023206 11469000 912.83 982 1166.6 1119.4 1267.2 908.73 1350.4 1122.3 1071.5 780.63 TRUE FALSE 835.189015 918.0716215 1087.414442 1205.616382 1216.724741 960.1815073 1260.31728 1112.487849 1182.886259 877.3403379 0.951955563 1.046425865 1.239444256 1.374171835 1.386833237 1.094423071 1.436520385 1.268023139 1.348263847 1 9.776992791 -5.206852792 2.714225119 1.289234895 0.965671751 0.418149096 0.128428747 0.24513094 3.449167578 0.032584561 0.113243465 6.21E-06 5.206852792 -0.323563145 S(ph)IPAGAEPGEK ddPTM_A459_MK2206_30min_R1 2 SIPAGAEPGEK 11 0 A6NGP5;Q9H910;Q9H910-3;Q9H910-2;H3BU16 A6NGP5;Q9H910-2 HN1L Hematological and neurological expressed 1-like protein 1 S(1)IPAGAEPGEK;S(1)IPAGAEPGEK 108.68 0.0098291 17659500 12511 9903.8 11227.3 10804.8 10487.3 7882.8 10882 10141.6 10182.3 9742.8 TRUE FALSE 11446.87375 9259.06082 10465.22216 11636.98757 10069.56863 8329.117324 10156.08164 10052.93306 11240.78652 10949.81162 1.045394583 0.845590878 0.955744493 1.062756874 0.91961113 0.76066307 0.927511996 0.918091873 1.026573508 1 13.41861843 -8.259246606 24.71795889 1.01328676 0.925932436 0.140750626 0.082526738 320.2078649 3609661.387 0.064962564 0.021760757 5.50E-09 8.259246606 -0.087354324 S(ph)IPNGLHDPSSTYIR ddPTM_A459_MK2206_30min_R1 1 SIPNGLHDPSSTYIR 15 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(1)IPNGLHDPSSTYIR 65.704 0.043175 2788400 1500.7 1139.6 1351.6 1430.6 1553.6 1508.1 1381.6 1226.6 1443.1 1113.9 TRUE FALSE 1373.057585 1065.411833 1259.857158 1540.78506 1491.716822 1593.487319 1289.435985 1215.875966 1593.115409 1251.898342 1.096780417 0.851037019 1.006357398 1.230758927 1.191563862 1.272856801 1.029984578 0.971225798 1.272559725 1 10.2899017 -5.601058361 6.805264136 1.139953337 0.962946644 0.267551705 0.116968779 0.258692969 18.27363432 0.032104353 0.056054778 2.51E-06 5.601058361 -0.177006693 S(ph)IPNGLHDPSSTYIR ddPTM_A459_MK2206_30min_R2 1 SIPNGLHDPSSTYIR 15 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(1)IPNGLHDPSSTYIR 96.673 0.0066291 6886200 7699.6 11992 8737 7037.1 11440 11399 16773 11506 9562.4 10243 TRUE FALSE 8289.087296 11396.49472 9028.287219 6462.146419 10990.80812 11832.79693 14570.68495 13009.87371 10394.12027 9908.771749 0.836540341 1.150142016 0.911140901 0.652164222 1.109199848 1.194173933 1.470483459 1.312965324 1.048981703 1 13.27449052 -6.499183996 5.963476293 1.233444891 0.903660812 0.439766613 0.167775689 0.167529773 20.37138195 0.055558671 0.06047067 3.17E-07 6.499183996 -0.329784079 S(ph)IPQLDLGWPDTIAYR ddPTM_A459_MK2206_30min_R1 2 SIPQLDLGWPDTIAYR 16 0 A6ND36 A6ND36 FAM83G Protein FAM83G 1 S(1)IPQLDLGWPDTIAYR;S(1)IPQLDLGWPDTIAYR 122.97 0.0014035 4876700 1052.83 950.77 1304.69 847.54 999.05 943.78 1188.06 1267.13 955.79 862.99 TRUE FALSE 963.2812799 888.8747002 1216.131278 912.8176777 959.255723 997.216008 1108.806685 1256.051616 1055.147791 969.9037164 0.993172068 0.916456639 1.253868046 0.941142571 0.989021597 1.028159797 1.143213152 1.295027119 1.087889213 1 9.921697726 -7.270400851 5.262124613 1.157271918 1.020698322 0.182501868 0.110419765 0.257139698 24.05784468 0.045018099 0.031719642 5.37E-08 7.270400851 -0.136573595 S(ph)IPQLDLGWPDTIAYR ddPTM_A459_MK2206_30min_R2 2 SIPQLDLGWPDTIAYR 16 0 A6ND36 A6ND36 FAM83G Protein FAM83G 1 S(1)IPQLDLGWPDTIAYR;S(1)IPQLDLGWPDTIAYR 223.93 3.08E-11 222960000 151853 113547 121237 112968 128582 146959 128408 28110 115777 55103 TRUE FALSE 163478.9824 107908.4211 125278.9811 103738.153 123533.2246 152551.6277 111547.8754 31784.07352 125847.0742 53304.99362 3.066860557 2.024358578 2.350229736 1.946124481 2.317479399 2.861863727 2.092634625 0.596268217 2.360887145 1 15.70198307 -7.539781609 23.54668319 1.356035682 2.387226695 0.472236231 0.522818789 108.2338296 150772.4809 0.230810703 0.133315739 2.89E-08 7.539781609 1.031191013 S(ph)IQDLTVTGTEPGQVSSR ddPTM_A459_MK2206_30min_R1 5 SIQDLTVTGTEPGQVSSR 18 0 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR 262.37 8.71E-43 114872300 5192.3 4597.36 4889.76 3965.09 4553.86 4091.33 4850.55 4124.4 3938.1 3949.34 TRUE FALSE 4750.667619 4298.071028 4557.856715 4270.481919 4372.470113 4322.977569 4526.97866 4088.340806 4347.479588 4438.614055 1.07030428 0.968336281 1.026864841 0.962120578 0.985098064 0.973947614 1.019908152 0.921084995 0.97946781 1 12.11589355 S(ph)IQDLTVTGTEPGQVSSR ddPTM_A459_MK2206_30min_R2 4 SIQDLTVTGTEPGQVSSR 18 0 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR 194.1 2.28E-10 127047000 96758.2 118374 108617 122759.7 131682 106433.1 112658 90925 100431 103742.5 TRUE FALSE 104166.0822 112495.7193 112238.2366 112729.8398 126511.503 110483.4862 97865.86927 102809.2097 109166.3068 100357.3907 1.03795128 1.120951018 1.11838536 1.123283886 1.260609728 1.100900346 0.975173513 1.024430876 1.08777546 1 16.61478734 -7.013603408 24.8054128 1.025903147 1.135383701 0.453067266 0.057352511 567.7928566 1035352.648 0.02217586 0.01796158 9.69E-08 7.013603408 0.109480554 S(ph)IQFVDWCPTGFK ddPTM_A459_MK2206_30min_R1 2 SIQFVDWCPTGFK 13 0 P68363;P68363-2;P68366-2;P68366 P68363;P68366-2 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain 1 S(0.956)IQFVDWCPT(0.044)GFK;S(0.529)IQFVDWCPT(0.471)GFK 131.61 0.0015069 34544000 7748.5 7443.9 8044.2 6841.4 7865.4 7322.8 8152.7 7355.6 6856.2 6962.5 TRUE FALSE 7089.449386 6959.300757 7498.182116 7368.325813 7552.104463 7737.410608 7608.848258 7291.290765 7568.926525 7825.067064 0.905992157 0.889359887 0.958225924 0.941631011 0.965116899 0.988797993 0.972368441 0.931786361 0.967266665 1 12.9338874 -5.298294801 5.862203015 0.963661642 0.897540929 0.665077658 0.019258091 0.105293061 10.62576874 0.005152164 0.011341991 5.03E-06 5.298294801 -0.066120712 S(ph)IQFVDWCPTGFK ddPTM_A459_MK2206_30min_R2 2 SIQFVDWCPTGFK 13 0 P68363;P68363-2;P68366-2;P68366 P68363;P68366-2 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain 1 S(0.99)IQFVDWCPT(0.01)GFK;S(0.977)IQFVDWCPT(0.023)GFK 145.79 0.00061759 19235200 144617 199514 200154 188262 209674 178649 183788 147196 188390 186083 TRUE FALSE 155688.9887 189606.4249 206827.0345 172880.3924 201441.1452 185447.6129 159656.4148 166435.0226 204775.8217 180011.1269 0.864885362 1.053303916 1.148968055 0.960387257 1.119048298 1.030200833 0.886925256 0.92458186 1.137573133 1 17.45772656 -7.034163555 24.91519701 0.977782044 1.037584377 0.037302873 0.096013639 1688.93922 1231724.35 0.036576348 0.02834863 9.24E-08 7.034163555 0.059802333 S(ph)ISADDDLQESSR ddPTM_A459_MK2206_30min_R2 2 SISADDDLQESSR 13 0 P18615;P18615-3;A0A0A0MT02;P18615-4;A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 NELFE Negative elongation factor E 1 S(0.993)IS(0.007)ADDDLQESSR;S(0.805)IS(0.195)ADDDLQESSR 269.88 3.30E-38 157302000 242710 214013 228663 244082 218195 221157 233465 178434 160197 244209 TRUE FALSE 261292.0642 203385.4256 236286.5103 224139.7198 209627.568 229573.2846 202810.7651 201755.9365 174130.6455 236240.4803 1.106042723 0.860925381 1.000194844 0.948777786 0.887348213 0.971777929 0.858492858 0.854027795 0.737090634 1 17.84989667 -6.670465415 0.792985561 0.851013101 0.98378431 0.240843566 0.085829746 0.913504592 1.269645383 0.054104721 0.057458264 2.14E-07 6.670465415 0.132771209 S(ph)ISESSR ddPTM_A459_MK2206_30min_R2 1 SISESSR 7 0 Q9H307 Q9H307 PNN Pinin 1 S(0.94)IS(0.059)ES(0.001)SR 102.62 0.01916 58546000 25001 24684 26053 29027 34973 24342 28735 25503 31183 34013 TRUE FALSE 26915.09578 23458.22845 26921.59402 26655.40125 33599.78429 25268.35187 24962.05998 28836.32966 33895.24097 32903.1586 0.818009484 0.712947615 0.81820698 0.810116791 1.021172001 0.767961282 0.758652392 0.876400045 1.030151585 1 15.00593846 -7.928741794 0.19619266 1.068644514 0.715220978 0.369226931 0.087415118 3.503386341 0.719547472 0.498345108 0.50747831 1.18E-08 7.928741794 -0.353423536 S(ph)ISGPSVGVMEMR ddPTM_A459_MK2206_30min_R1 1 SISGPSVGVMEMR 13 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4;C9JIY9;C9JWU7 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 S(0.902)IS(0.098)GPSVGVMEMR 84.169 0.029556 4154400 1722.8 1283.8 1365.4 1295.7 1297.8 1152.8 1333.1 1346.5 1207 1042.2 TRUE FALSE 1576.266813 1200.224387 1272.720452 1395.495039 1246.105878 1218.07054 1244.171331 1334.727692 1332.471969 1171.315604 1.345723396 1.024680609 1.086573463 1.191391145 1.063851513 1.039916599 1.062199912 1.139511578 1.137585775 1 10.19391414 -4.752699238 24.99957757 1.088142999 1.345723884 0.665500388 0.055795656 212.9846483 609158.263 0.014095651 0.164245126 1.77E-05 4.752699238 0.257580886 S(ph)ISGTSTSEKPNSMDTANTSPFK ddPTM_A459_MK2206_30min_R2 2 SISGTSTSEKPNSMDTANTSPFK 23 1 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.577)IS(0.313)GT(0.075)S(0.016)T(0.014)S(0.005)EKPNSMDTANTSPFK;S(0.747)IS(0.246)GT(0.004)S(0.001)T(0.001)SEKPNSMDTANTSPFK 74.748 0.00052779 33001700 45536 46601 48578 55717 46890 38906 54322 38654 45883 59743 TRUE FALSE 49022.27117 44286.8621 50197.56627 51164.74287 45048.863 40386.59509 47189.45615 43706.21052 49873.8204 57793.5908 0.848230236 0.766293658 0.868566316 0.885301331 0.779478526 0.698807507 0.816517117 0.756246669 0.862964556 1 15.81862189 -8.588035241 5.449491345 0.999987687 0.802673014 0.560454405 0.053153398 0.370976026 29.39217015 0.05426839 0.014088264 2.58E-09 8.588035241 -0.197314672 S(ph)ISKDSLASNIVNLTPQNQPHPTATK ddPTM_A459_MK2206_30min_R2 1 SISKDSLASNIVNLTPQNQPHPTATK 26 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 S(0.338)IS(0.292)KDS(0.338)LAS(0.033)NIVNLTPQNQPHPTATK 92.865 1.05E-05 8318000 17224 32166 27652 39748 42893 41909 48212 30466 39542 35708 TRUE FALSE 18542.68268 30568.68321 28573.90388 36500.46125 41208.8053 43503.87636 41881.70649 34448.01081 42981.29168 34542.85088 0.536802325 0.884949633 0.827201668 1.05667194 1.192976383 1.259417658 1.21245657 0.997254422 1.244289067 1 15.07609954 -5.086932337 0.882928443 1.161037582 0.426556769 0.755191738 0.106776943 0.746573674 0.621458869 0.040056551 0.484220957 8.19E-06 5.086932337 -0.734480814 S(ph)ISLTRPGSSSLSSGPNSILCR ddPTM_A459_MK2206_30min_R2 1 SISLTRPGSSSLSSGPNSILCR 22 1 A0A087WZ32;A0A087X038;A8K727;Q9HB19 A0A087WZ32 PLEKHA2 Pleckstrin homology domain-containing family A member 2 1 S(0.496)IS(0.496)LT(0.007)RPGSSSLSSGPNSILCR 58.294 0.01074 10655000 5744.9 6862 6056.9 6357.3 6821 6536.3 7924.1 4115.4 4945.3 4053 TRUE FALSE 6184.733961 6521.243058 6258.834023 5837.888254 6553.173267 6785.043477 6883.656151 4653.29691 5375.433255 3920.750942 1.577436071 1.663263787 1.596335527 1.48897197 1.671407688 1.730546923 1.755698399 1.18683818 1.371021351 1 11.93691429 -7.769241495 24.99969248 1.209197154 1.638519505 0.779586501 0.110552945 86.1212282 275946.1553 0.059433963 0.029381119 1.70E-08 7.769241495 0.429322351 S(ph)ISLYYTGEK ddPTM_A459_MK2206_30min_R2 1 SISLYYTGEK 10 0 P19338;H7BY16 P19338 NCL Nucleolin 1 S(0.995)IS(0.005)LYYTGEK 103.88 0.013748 4753100 22177 22774 20429 26563 23617 16950 27684 23055 16763 22434 TRUE FALSE 23874.88817 21643.07628 21110.09266 24392.71793 22689.67791 17595.04413 24049.05755 26068.36766 18221.01544 21701.98042 1.10012486 0.997285771 0.972726556 1.123985805 1.04551186 0.810757534 1.108150366 1.20119764 0.839601506 1 14.40553908 -4.752363035 23.88442791 1.017499404 1.100125139 0.049054076 0.114540816 786.2792585 2068818.837 0.028276444 0.328734707 1.77E-05 4.752363035 0.082625735 S(ph)ISNEGLTLNNSHVSK ddPTM_A459_MK2206_30min_R2 2 SISNEGLTLNNSHVSK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.59)IS(0.41)NEGLTLNNSHVSK;S(0.555)IS(0.441)NEGLT(0.004)LNNSHVSK 189.84 6.50E-07 69085000 52079 120825 75977 177366 184564 200201 159120 108566 150764 95235 TRUE FALSE 56066.20828 114825.0062 78510.03526 162874.6304 177317.09 207819.7893 138227.3529 122755.949 163877.1802 92127.48975 0.608571974 1.246370725 0.852189021 1.767926499 1.924692516 2.255784782 1.500392046 1.332457329 1.778808699 1 16.49134408 -5.761999141 24.99999942 1.69556307 0.936776466 0.48297262 0.352559576 12.58566404 562149.0928 0.09896819 0.157434101 1.73E-06 5.761999141 -0.758786604 S(ph)ISPEWK ddPTM_A459_MK2206_30min_R1 1 SISPEWK 7 0 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 S(0.697)IS(0.303)PEWK 80.455 0.04486 10223000 5721.1 6743.4 7255.2 5449.5 5353.3 4787.3 5325.9 6049.8 5891.6 5802.3 TRUE FALSE 5234.490402 6304.403434 6762.737238 5869.221434 5140.066725 5058.352789 4970.618929 5996.907236 6504.052903 6521.132729 0.802696498 0.966765085 1.03704947 0.900030973 0.788216854 0.775686219 0.762232443 0.919611283 0.99738085 1 12.67090687 -8.104059195 4.103932506 0.995953961 0.866467622 0.294283695 0.083692026 0.360906044 10.20769053 0.071548858 0.02507827 7.87E-09 8.104059195 -0.129486339 S(ph)ISPSALQDLLR ddPTM_A459_MK2206_30min_R1 1 SISPSALQDLLR 12 0 Q92793-2;Q92793 Q92793-2 CREBBP CREB-binding protein 1 S(0.975)IS(0.025)PSALQDLLR 217.2 4.92E-08 12100000 2542.5 2833.9 2556.5 2260.7 2659.3 2621.6 2767.9 2255.5 2089 2018 TRUE FALSE 2326.247024 2649.412595 2382.971903 2434.819506 2553.37445 2770.032726 2583.258441 2235.780401 2306.159026 2268.005075 1.025679814 1.168168724 1.050690728 1.073551172 1.125823958 1.221352085 1.139000291 0.985791622 1.016822692 1 11.14720815 -7.763354996 24.99875963 1.000980341 1.117399504 0.482904278 0.054026942 45.49783952 593713.9001 0.029140338 0.015124224 1.72E-08 7.763354996 0.116419163 S(ph)ISSPNVNR ddPTM_A459_MK2206_30min_R2 1 SISSPNVNR 9 0 Q9NQT8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 S(0.987)IS(0.005)S(0.008)PNVNR 93.442 0.024562 22032000 66681 85882 71120 67891 73852 63255 89757 64899 64605 72659 TRUE FALSE 71786.14863 81617.22476 73491.1053 62344.08813 70952.1994 65662.21335 77971.79808 73381.52213 70224.22612 70288.14278 1.021312355 1.161180557 1.045569031 0.886978737 1.009447634 0.934186205 1.109316522 1.044009974 0.999090648 1 16.10099371 -5.522031902 24.99999709 0.999176818 1.094278554 0.258943967 0.063921103 38.33499236 1131696.993 0.017607274 0.030978666 3.01E-06 5.522031902 0.095101736 S(ph)ITSPPSTSTTK ddPTM_A459_MK2206_30min_R2 1 SITSPPSTSTTK 12 0 K7EN08;Q14938-6;Q14938-5;Q14938-3;Q14938-4;Q14938;C9JWJ8;Q14938-2 K7EN08 NFIX Nuclear factor 1;Nuclear factor 1 X-type 1 S(0.999)IT(0.001)SPPSTSTTK 91.62 0.022789 4165600 28457 25979 28039 22300 18427 18672 21700 12312 12704 18514 TRUE FALSE 30635.6898 24688.92064 28973.80627 20478.01867 17703.46339 19382.57604 18850.76393 13921.22067 13808.97096 17909.8897 1.710545979 1.378507688 1.61775459 1.143391669 0.988474172 1.08222755 1.052533782 0.777292374 0.771024902 1 14.12846883 -5.864043025 0.714637895 0.87264023 1.709513321 0.818434741 0.129974852 0.410578643 0.382251105 0.071264355 0.223926218 1.37E-06 5.864043025 0.836873091 S(ph)ITST(ph)PLSGK ddPTM_A459_MK2206_30min_R2 1 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 2 S(1)ITS(0.001)T(0.993)PLS(0.006)GK 116.24 0.045398 0 37145 38343 41084 43249 36192 34239 38985 28437 33002 31165 TRUE FALSE 39988.84976 36438.94238 42453.72005 39715.41835 34770.92023 35541.98914 33866.22267 32153.81354 35872.45431 30148.0886 1.326414098 1.208665095 1.408172857 1.317344488 1.15333747 1.178913516 1.123329015 1.066529091 1.189874913 1 14.87977892 -6.351040636 3.070769437 1.119302166 1.315416832 0.670498447 0.067798703 0.165827751 3.026087079 0.021952282 0.025757993 4.46E-07 6.351040636 0.196114666 S(ph)ITSTPLSGK ddPTM_A459_MK2206_30min_R1 3 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 S(0.998)IT(0.002)STPLSGK;S(0.998)IT(0.002)STPLSGK;S(0.994)IT(0.006)STPLSGK 139.31 0.0015418 96868500 8746.8 8523.6 9281.6 8132.4 8270.5 7816.7 8369.6 7749.1 7298.6 7351.1 TRUE FALSE 8002.838729 7968.712091 8651.590852 8758.758857 7941.068472 8259.274799 7811.279255 7681.350436 8057.315588 8261.809766 0.968654442 0.964523793 1.047178657 1.060150149 0.961177841 0.99969317 0.945468303 0.929741867 0.975248259 1 13.01224213 -6.844225839 1.86692919 0.958808796 1.006929296 0.192912535 0.035844753 0.517225054 3.707184243 0.016205465 0.013969955 1.43E-07 6.844225839 0.048120501 S(ph)ITSTPLSGK ddPTM_A459_MK2206_30min_R2 2 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 S(0.989)IT(0.011)STPLSGK;S(0.806)IT(0.017)S(0.155)T(0.022)PLS(0.001)GK 102.05 0.015706 112444000 77493 90549 76049 94931 92826 79168 95425 58610 65421 89252 TRUE FALSE 83425.92366 86052.46833 78584.4357 87174.83363 89181.18483 82180.79372 82895.58287 66270.52824 71111.20033 86339.71455 0.966252021 0.99667307 0.910177154 1.009672479 1.032910351 0.951830732 0.960109531 0.767555563 0.82362098 1 16.3977367 -7.634979236 7.401223706 0.847303411 0.977644932 0.389821224 0.063299849 0.194698727 11.89170958 0.0290204 0.016631273 2.32E-08 7.634979236 0.130341521 S(ph)IYQVENLK ddPTM_A459_MK2206_30min_R1 2 SIYQVENLK 9 0 Q9NY30 Q9NY30 BTG4 Protein BTG4 1 S(0.616)IY(0.384)QVENLK;S(0.889)IY(0.111)QVENLK 98.299 0.019823 12920700 10507.1 13114.4 10977 12611.9 11896.4 9882.7 10666.7 8938.1 6707.8 7671.1 TRUE FALSE 9613.41597 12260.65018 10231.91182 13583.27072 11422.5412 10442.24993 9955.143905 8859.955134 7405.099814 8621.453782 1.115057415 1.422109367 1.186796575 1.575519752 1.324897342 1.211193634 1.154694342 1.027663705 0.858915445 1 13.07371545 -7.522730436 1.384526806 0.931872789 1.331020032 0.615587444 0.124007651 0.282058053 1.029193932 0.087268681 0.040838947 3.00E-08 7.522730436 0.399147244 S(ph)IYQVENLK ddPTM_A459_MK2206_30min_R2 1 SIYQVENLK 9 0 Q9NY30 Q9NY30 BTG4 Protein BTG4 1 S(0.688)IY(0.312)QVENLK 87.913 0.03189 1128400 14417 19954 15581 23070 17898 18018 19177 17645 15074 20275 TRUE FALSE 15520.7766 18963.11338 16100.46276 21185.1072 17195.23459 18703.68762 16659.03686 19951.26208 16385.10927 19613.42841 0.791334196 0.966843378 0.820889771 1.080132793 0.876707235 0.953616432 0.849368938 1.017224611 0.835402609 1 14.25955412 -4.75237659 24.971991 0.931203034 0.791333922 0.212546176 0.081913831 535.4025946 1475161.34 0.018550232 0.222799237 1.77E-05 4.75237659 -0.139869112 S(ph)IYYITGESK ddPTM_A459_MK2206_30min_R1 1 SIYYITGESK 10 0 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 S(0.997)IYYIT(0.002)GES(0.001)K 109.72 0.0069568 0 2563.5 2841.4 2777 2046.8 2473.5 2579.1 3005 2079.2 2348.3 2537.2 TRUE FALSE 2345.460864 2656.424344 2588.504977 2204.444891 2374.975257 2725.126413 2804.541933 2061.021774 2592.414188 2851.527491 0.822527881 0.931579426 0.907760835 0.773075097 0.832878261 0.955672503 0.983522671 0.722778153 0.909131754 1 11.47751923 -6.731993689 24.98854732 0.901226095 0.856437776 0.108451645 0.0826645 683.8162382 580306.6156 0.028369808 0.028366069 1.85E-07 6.731993689 -0.044788319 S(ph)IYYITGESK ddPTM_A459_MK2206_30min_R2 1 SIYYITGESK 10 0 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 S(1)IYYITGESK 125.97 0.0035357 3867200 69600 61074 63056 67161 60656 47929 79625 58467 41267 57363 TRUE FALSE 74928.62951 58041.15397 65158.25557 61673.73146 58274.34067 49752.97168 69170.14185 66108.83765 44856.32907 55491.25001 1.350278278 1.04595146 1.174207746 1.111413627 1.050153685 0.896591295 1.246505383 1.191338051 0.808349588 1 15.75997268 -2.531345658 1.431804755 1.064540357 199.9977425 0.306877337 0.128534002 1372.935098 5.27503209 0.037125935 894562.6291 0.002942079 2.531345658 198.9332021 S(ph)KAMPMSRVSTVT(ph)K ddPTM_A459_MK2206_30min_R1 1 SKAMPMSRVSTVTK 14 2 Q6P1M9 Q6P1M9 ARMCX5 Armadillo repeat-containing X-linked protein 5 2 S(0.914)KAMPMS(0.078)RVS(0.165)T(0.164)VT(0.679)K 56.548 0.046533 0 335.89 285.62 254.8 269.55 425.59 297.06 370.71 464.89 297.87 492.81 TRUE FALSE 307.3207917 267.0260861 237.5048859 290.3107877 408.6378491 313.8792805 345.9806123 460.8255157 328.8346524 553.8630233 0.554867862 0.482115749 0.428815205 0.52415629 0.737795866 0.566709217 0.62466819 0.832020728 0.59371115 1 9.113385415 -14.52287798 0.077691773 2.438861274 0.149101576 0.698767896 0.090796294 142.5493928 0.784391422 34.94262429 3.465943617 3.00E-15 14.52287798 -2.289759698 S(ph)KDVEFQDGWPR ddPTM_A459_MK2206_30min_R1 3 SKDVEFQDGWPR 12 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 S(1)KDVEFQDGWPR;S(1)KDVEFQDGWPR;S(1)KDVEFQDGWPR 82.483 0.019935 19519500 7350.5 7143.6 7239.9 6724.4 5645.4 4912.7 5829.6 5132.2 5764.8 5596.5 TRUE FALSE 6725.301376 6678.550342 6748.47576 7242.314453 5420.531764 5190.852829 5440.718021 5087.329716 6364.07159 6289.836671 1.06923307 1.06180028 1.072917488 1.151431242 0.861792133 0.825276251 0.865001479 0.808817459 1.01180236 1 12.61880684 -6.2694809 24.99409319 0.880858204 1.085776002 0.660029166 0.067497983 338.7428844 1052855.44 0.020275392 0.023387117 5.38E-07 6.2694809 0.204917798 S(ph)KFDSDEEEEDTENVEAASSGK ddPTM_A459_MK2206_30min_R2 2 SKFDSDEEEEDTENVEAASSGK 22 1 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.498)KFDS(0.498)DEEEEDT(0.005)ENVEAASSGK;S(0.916)KFDS(0.084)DEEEEDTENVEAASSGK 105.95 3.50E-05 12224800 53080 56543 49277 46009 46041 38778 80067 75630 69208 95544 TRUE FALSE 57143.84561 53735.15684 50919.87059 42249.91752 44233.199 40253.72396 69554.10672 85515.10068 75227.58674 92426.4071 0.618263193 0.581383162 0.550923401 0.457119549 0.478577502 0.435521895 0.752535005 0.925223682 0.813918761 1 16.49601748 -7.474118171 3.659885278 0.897861014 0.520671996 0.87058015 0.068490946 0.084691758 2.309853855 0.034272751 0.020895722 3.36E-08 7.474118171 -0.377189018 S(ph)KPLAASPKPAGLK ddPTM_A459_MK2206_30min_R2 1 SKPLAASPKPAGLK 14 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.98)KPLAAS(0.02)PKPAGLK 132.24 0.019575 0 26632 24508 21537 22055 24666 14956 30210 19034 17573 24719 TRUE FALSE 28670.9664 23290.96836 22255.03283 20253.03595 23697.4889 15525.16106 26243.39071 21521.80915 19101.46778 23912.42105 1.198998894 0.974011302 0.930689234 0.846967185 0.991011694 0.649250907 1.09747945 0.900026355 0.798809444 1 14.54547259 -4.552884299 1.57602037 0.895666148 1.47303471 0.37359017 0.115789461 2.022338888 3.07287406 0.030862203 2.139172616 2.80E-05 4.552884299 0.577368562 S(ph)KPLTR ddPTM_A459_MK2206_30min_R2 1 SKPLTR 6 1 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 S(1)KPLTR 69.093 0.043168 3348600 14191 7761.5 9632 10368 13176 5642.7 12349 153250 28764 18322 TRUE FALSE 15277.47387 7376.075196 9953.126073 9520.901234 12658.64404 5857.436903 10727.56147 173280.3012 31265.84073 17724.15464 0.86195783 0.416159492 0.561557167 0.537170964 0.714202979 0.330477646 0.605250952 9.776505831 1.76402437 1 14.1134292 -7.599500005 25 4.700391129 0.559256878 0.354233264 2.197067238 31.73826653 10354.06761 0.941906021 0.543808066 2.51E-08 7.599500005 -4.141134251 S(ph)KPSPQKDQALGDGIAPPQK ddPTM_A459_MK2206_30min_R2 1 SKPSPQKDQALGDGIAPPQK 20 2 Q9H9J4-2;Q9H9J4;B4DP25;E5RJP3 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 S(0.602)KPS(0.398)PQKDQALGDGIAPPQK 55.322 0.017591 15928000 109210 106320 108480 111260 102960 82442 127240 97013 91069 127660 TRUE FALSE 117571.2016 101040.3034 112096.6691 102169.7021 98917.27307 85579.38808 110533.2352 109692.9322 98990.017 123494.4647 0.952036206 0.81817678 0.90770602 0.827322118 0.80098548 0.692981571 0.895046069 0.888241692 0.801574526 1 16.91408685 -10.32487487 15.67162055 1 0.840666798 0.317915472 0.069076406 0 0 0.068232777 0.016548879 4.73E-11 10.32487487 -0.159333202 S(ph)KPVLEPLTPPLGSPR ddPTM_A459_MK2206_30min_R2 1 SKPVLEPLTPPLGSPR 16 1 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3;Q9H7P9-2 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 S(0.982)KPVLEPLT(0.018)PPLGSPR 81.128 0.012135 19856000 193450 190680 155160 166140 153750 110250 157530 151640 109770 152570 TRUE FALSE 208260.6807 181211.1085 160332.957 152565.8305 147713.0025 114445.641 136846.1218 171459.8687 119317.5962 147591.6534 1.411060016 1.227786967 1.086328077 1.033702293 1.000822195 0.775420821 0.927194178 1.16171792 0.808430514 1 17.17125161 -4.897368054 0.902180463 0.945431065 1.611355915 0.688487092 0.101287287 1.113810073 0.80169314 0.036943654 0.707196051 1.27E-05 4.897368054 0.66592485 S(ph)KS(ph)Y(ph)DEGLDDY(ph)REDAKLS(ph)FK ddPTM_A459_MK2206_30min_R1 1 SKSYDEGLDDYREDAKLSFK 20 3 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 5 S(1)KS(1)Y(1)DEGLDDY(1)REDAKLS(1)FK 47.204 0.042664 0 0 0 0 0 195.47 68.814 135.74 160.09 0 70.729 TRUE FALSE 0 0 0 0 187.684016 72.71018921 126.6850323 158.69035 0 79.4914425 0 0 0 0 2.361059381 0.914692034 1.593693966 1.996319919 0 1 6.312727653 -6.226416528 23.70148647 1.355100014 8.32E-07 0.530750717 0.603025356 244.5253991 165480.5247 0.170035497 0.219501107 5.94E-07 6.226416528 -1.355099182 S(ph)KSDATASISLSSNLKR ddPTM_A459_MK2206_30min_R1 1 SKSDATASISLSSNLKR 17 2 Q9UBF8-2;A0A0B4J1S8;Q9UBF8 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(0.499)KS(0.499)DAT(0.002)ASISLSSNLKR 71.042 0.034596 24146000 3221.8 3568.3 3625 3319.4 3466.5 2899.3 3038.4 3715.4 2518.4 2165.6 TRUE FALSE 2947.768992 3336.003021 3378.9451 3575.060763 3328.421965 3063.45586 2835.71388 3682.91665 2780.196692 2433.890877 1.21113441 1.370646093 1.38828948 1.468866495 1.367531304 1.258666068 1.165094913 1.513180679 1.142284857 1 11.24904877 -6.782777866 5.485901321 1.243621003 1.36971216 0.209916453 0.135586584 0.330542864 28.57589626 0.046572468 0.042564902 1.65E-07 6.782777866 0.126091156 S(ph)KSDSYTLDPDTLR ddPTM_A459_MK2206_30min_R2 1 SKSDSYTLDPDTLR 14 1 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 S(0.825)KS(0.172)DS(0.002)YTLDPDTLR 75.911 0.023819 28055000 73423 83630 73715 84711 77625 68302 89601 82284 87923 93282 TRUE FALSE 79044.32133 79477.05581 76172.62131 77789.84032 74577.05247 70901.28047 77836.28107 93038.80132 95570.38361 90238.21598 0.875951729 0.880747197 0.844128183 0.862049847 0.826446441 0.785712347 0.862564494 1.031035469 1.059089905 1 16.46145093 -7.748080985 5.351529843 1.035724206 0.84564695 0.893903837 0.028727882 0.0520255 4.378530947 0.015953201 0.008368923 1.79E-08 7.748080985 -0.190077256 S(ph)KSEEAHAEDSVMDHHFR ddPTM_A459_MK2206_30min_R2 1 SKSEEAHAEDSVMDHHFR 18 1 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 S(0.738)KS(0.262)EEAHAEDSVMDHHFR 70.452 0.010129 10245000 30201 40523 31779 30605 38142 29716 43142 31947 39697 24637 TRUE FALSE 32513.21178 38510.68675 32838.496 28104.4736 36644.35343 30846.8632 37477.40358 36122.58259 43149.7733 23833.09671 1.364204248 1.615849053 1.377852673 1.17922039 1.537540584 1.294286831 1.572494084 1.515647884 1.810497974 1 14.5406788 -7.278098266 24.747011 1.517630641 1.400787449 0.015655192 0.219995066 2319.089039 3445025.938 0.087662922 0.059283117 5.27E-08 7.278098266 -0.116843191 S(ph)KSISSSNPDLAVAPGSVDDEVSR ddPTM_A459_MK2206_30min_R1 1 SKSISSSNPDLAVAPGSVDDEVSR 24 1 K7ESB7;K7EKT0;K7EP20;Q96HP0 K7ESB7;Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 S(0.357)KS(0.145)IS(0.145)S(0.145)S(0.208)NPDLAVAPGSVDDEVSR 79.069 0.00016324 8250400 2725 2362.2 2225.7 2393.1 2773.4 1937.7 2478.3 2833.5 2226 2079.1 TRUE FALSE 2493.22444 2208.420351 2074.625685 2577.416977 2662.929605 2047.410899 2312.977129 2808.727008 2457.400666 2336.674604 1.066996849 0.945112489 0.887853911 1.103027769 1.139623634 0.876207109 0.989858461 1.202018887 1.051665757 1 11.19024113 S(ph)KSISSSNPDLAVAPGSVDDEVSR ddPTM_A459_MK2206_30min_R2 3 SKSISSSNPDLAVAPGSVDDEVSR 24 1 K7ESB7;K7EKT0;K7EP20;Q96HP0 K7ESB7;Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 S(0.466)KS(0.189)IS(0.189)S(0.078)S(0.078)NPDLAVAPGSVDDEVSR;S(0.325)KS(0.117)IS(0.117)S(0.117)S(0.325)NPDLAVAPGSVDDEVSR;S(0.625)KS(0.094)IS(0.094)S(0.094)S(0.094)NPDLAVAPGSVDDEVSR 96.515 5.59E-06 15475600 57235 87391 84777 87224 87195 81088 89716 57690 79502 70888 TRUE FALSE 61616.95561 83051.29002 87603.42287 80097.52018 83771.28618 84173.86066 77936.18143 65230.28108 86416.94025 68574.93037 0.898534716 1.211102798 1.277484678 1.168029187 1.221602206 1.227472784 1.136511273 0.951226355 1.260182691 1 16.06539363 -10.59854791 5.613150839 0.999998999 1.154407922 0.120835567 0.121104797 1.51E-06 2.49E-07 0.116875389 0.028346262 2.52E-11 10.59854791 0.154408923 S(ph)KSLCHDEIENLLDSDHR ddPTM_A459_MK2206_30min_R1 2 SKSLCHDEIENLLDSDHR 18 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(0.5)KS(0.5)LCHDEIENLLDSDHR;S(0.5)KS(0.5)LCHDEIENLLDSDHR 81.594 0.0044097 9539300 9065.5 7691.6 8591.9 7174.6 11257.4 10044.8 9753.3 8857.8 7010.9 5931.9 TRUE FALSE 8294.43162 7190.875442 8008.705766 7727.188935 10808.99392 10613.5279 9102.675153 8780.357188 7739.708144 6666.788556 1.244141996 1.078611596 1.201283901 1.159057149 1.621319445 1.592000077 1.365376309 1.317029499 1.160934996 1 12.70277626 S(ph)KSLCHDEIENLLDSDHR ddPTM_A459_MK2206_30min_R2 2 SKSLCHDEIENLLDSDHR 18 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(0.5)KS(0.5)LCHDEIENLLDSDHR;S(0.5)KS(0.5)LCHDEIENLLDSDHR 116.78 0.00044248 34404000 102380 185093 147098 208386 234280 226950 237630 165334 199121 197170 TRUE FALSE 110218.2915 175901.5508 152002.1739 191360.1972 225080.99 235586.7413 206428.8956 186943.7215 216440.1847 190736.359 0.577856745 0.92222349 0.796922908 1.003270683 1.180063367 1.235143328 1.082273441 0.980115812 1.134761016 1 17.54122036 -5.081813623 0.883854406 1.104343318 0.508213258 0.695610793 0.101398786 0.921979316 0.765486194 0.039781761 0.486452918 8.28E-06 5.081813623 -0.59613006 S(ph)KSLGDLTSEDIACNFESK ddPTM_A459_MK2206_30min_R1 1 SKSLGDLTSEDIACNFESK 19 1 Q4KWH8-2;A0A2U3TZV8;Q4KWH8 Q4KWH8-2 PLCH1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1" 1 S(0.522)KS(0.371)LGDLT(0.097)S(0.011)EDIACNFESK 81.723 0.0030574 8698500 3068.5 2991.3 3050.8 2870.6 2790 2338.1 2822.8 2632 2517.5 1854.8 TRUE FALSE 2807.507962 2796.565826 2843.720196 3091.694109 2678.868392 2470.481201 2634.496162 2608.988701 2779.203134 2084.586627 1.346793616 1.341544549 1.364165038 1.483120955 1.285083746 1.185118032 1.263797881 1.251561661 1.333215467 1 11.02554561 -6.503379412 10.90262866 1.227002855 1.380088969 0.458184841 0.089435081 0.622332434 344.2250069 0.027083563 0.029667564 3.14E-07 6.503379412 0.153086114 S(ph)KSMDLGIADETK ddPTM_A459_MK2206_30min_R1 1 SKSMDLGIADETK 13 1 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-4;Q8TEW0-8 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.686)KS(0.314)MDLGIADETK 133.87 0.0060725 13992000 4570.3 4368.6 4467.6 3792.7 3357.9 2819.5 3956.3 4071.7 4162.2 3866.5 TRUE FALSE 4181.571985 4084.203346 4164.351759 4084.814411 3224.147733 2979.137653 3692.382446 4036.101556 4594.875585 4345.511211 0.962273892 0.939867175 0.95831113 0.940007795 0.741949008 0.685566671 0.849700361 0.92879787 1.057384359 1 12.08531019 -10.57296127 17.83494536 0.999999974 0.889287494 0.078335018 0.104793941 0 0 0.113236493 0.027463884 2.67E-11 10.57296127 -0.11071248 S(ph)KSPLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK ddPTM_A459_MK2206_30min_R1 1 SKSPLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK 36 2 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.5)KS(0.5)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK 79.553 7.70E-07 11949000 3579.4 3873.4 4162.6 3450.2 2591.3 2024.7 2726 3826.3 3510.7 3273 TRUE FALSE 3274.953234 3621.240956 3880.05431 3715.935002 2488.083034 2139.336764 2544.153514 3792.847063 3875.649828 3678.48395 0.890299721 0.984438428 1.054797129 1.010181111 0.676388172 0.581581106 0.691630995 1.031089741 1.053599766 1 11.84489558 -6.228765097 24.65817729 0.820358531 0.989884661 0.169227741 0.154908195 993.481052 749746.0322 0.051185627 0.066075215 5.91E-07 6.228765097 0.16952613 S(ph)KSPPKVPIVIQDDSLPAGPPPQIR ddPTM_A459_MK2206_30min_R1 1 SKSPPKVPIVIQDDSLPAGPPPQIR 25 2 Q7Z422-4;Q7Z422-5;Q7Z422;Q7Z422-2;Q7Z422-3 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 1 S(0.5)KS(0.5)PPKVPIVIQDDSLPAGPPPQIR 58.758 0.0034965 80431000 6063.8 7291.4 6731 6183.6 5131.8 4525.6 5758.9 5356.4 6465.9 6431.6 TRUE FALSE 5548.041968 6816.728535 6274.118474 6659.861943 4927.389539 4781.835561 5374.734289 5309.56956 7138.053443 7228.395164 0.767534403 0.943048682 0.867982219 0.921347241 0.681671301 0.661534885 0.743558448 0.734543345 0.987501829 1 12.81945966 -4.489834305 17.19248054 0.821905504 0.566422678 0.014627425 0.120408455 10569695.64 157504624.7 0.031170029 81741775.21 3.24E-05 4.489834305 -0.255482826 S(ph)KSPPKVPIVIQDDSLPAGPPPQIR ddPTM_A459_MK2206_30min_R2 3 SKSPPKVPIVIQDDSLPAGPPPQIR 25 2 Q7Z422-4;Q7Z422-5;Q7Z422;Q7Z422-2;Q7Z422-3 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 1 S(0.5)KS(0.5)PPKVPIVIQDDSLPAGPPPQIR;S(0.5)KS(0.5)PPKVPIVIQDDSLPAGPPPQIR;S(0.5)KS(0.5)PPKVPIVIQDDSLPAGPPPQIR 93.416 7.12E-06 237547000 232831 228161 225290 214380 198927 143716 266144 204189 170409 240901 TRUE FALSE 250656.7204 216830.8565 232801.0562 196864.4682 191116.1265 149185.2131 231198.9731 230877.2034 185230.8668 233040.4201 1.075593325 0.930443124 0.998972865 0.844765334 0.820098618 0.64016883 0.992098165 0.990717418 0.794844374 1 17.83022068 -5.758029366 24.97279889 0.862131712 0.994547142 0.234779471 0.109084421 134.5556775 985380.9348 0.031143586 0.05127142 1.75E-06 5.758029366 0.132415429 S(ph)KSPRDPDANWDSPSR ddPTM_A459_MK2206_30min_R2 1 SKSPRDPDANWDSPSR 16 2 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.5)KS(0.5)PRDPDANWDSPSR 56.768 0.033903 3654600 6231.6 11273 11540 13794 9863.9 13186 14019 8894.9 14226 13963 TRUE FALSE 6708.696087 10713.19921 11924.73784 12666.98608 9476.593724 13687.80247 12178.28846 10057.49397 15463.35177 13507.38845 0.496668628 0.793136234 0.882830747 0.937782023 0.701585933 1.013356691 0.901602001 0.744592043 1.144806919 1 13.72146115 -4.468753743 1.446943955 0.906257627 2.80E-07 0.523115402 0.121076727 2.076943001 2.22792425 0.032796843 3.384006677 3.40E-05 4.468753743 -0.906257347 S(ph)KSPVGNPQLIQFSR ddPTM_A459_MK2206_30min_R1 2 SKSPVGNPQLIQFSR 15 1 Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3;G8JLP4 Q9Y4F3-3 KIAA0430 Meiosis arrest female protein 1 1 S(0.5)KS(0.5)PVGNPQLIQFSR;S(0.721)KS(0.279)PVGNPQLIQFSR 120.99 0.0048076 45772000 3142.3 3352.1 3042.7 2997.7 3043.6 2587.2 2668.3 2524.1 2662 2472.89 TRUE FALSE 2875.030884 3133.877681 2836.170001 3228.583373 2922.366967 2733.685028 2490.302576 2502.03206 2938.724426 2779.250283 1.034462748 1.127598223 1.020480242 1.161674209 1.051494709 0.983605199 0.896033938 0.900254315 1.057380274 1 11.44048005 -6.748766892 3.299941307 0.953974453 1.086121261 0.482417704 0.058256204 0.18979204 4.306882343 0.02046849 0.019216939 1.78E-07 6.748766892 0.132146808 S(ph)KSPVGNPQLIQFSR ddPTM_A459_MK2206_30min_R2 2 SKSPVGNPQLIQFSR 15 1 Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3;G8JLP4 Q9Y4F3-3 KIAA0430 Meiosis arrest female protein 1 1 S(0.764)KS(0.236)PVGNPQLIQFSR;S(0.957)KS(0.043)PVGNPQLIQFSR 118.52 0.0011079 87966000 39150 62505 57669 55160 48549 48882 65737 44898 41844 46561 TRUE FALSE 42147.3541 59401.09259 59591.65568 50653.25155 46642.72232 50742.23876 57105.65294 50766.32276 45483.51548 45041.71838 0.935740367 1.318801652 1.323032464 1.124585237 1.035544912 1.126560899 1.267839127 1.127095603 1.00980862 1 15.45897425 -8.202761544 3.805277216 1.000994521 1.167888933 0.221797562 0.11497373 0.342691323 9.596005382 0.096004108 0.030717855 6.27E-09 8.202761544 0.166894412 S(ph)KSQSSGSSATHPISVPGAR ddPTM_A459_MK2206_30min_R1 1 SKSQSSGSSATHPISVPGAR 20 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(0.584)KS(0.408)QS(0.003)S(0.004)GS(0.001)SATHPISVPGAR 79.236 0.038884 0 3922.3 3550 3262.7 2612 3546.7 3509.6 3707.7 3361.8 3197.3 2764.6 TRUE FALSE 3588.687788 3318.894355 3041.237014 2813.176693 3405.427429 3708.310519 3460.366098 3332.408137 3529.670777 3107.09952 1.154996087 1.068164806 0.978802576 0.905402828 1.096014919 1.193495894 1.113696577 1.07251413 1.136001842 1 11.60135274 -6.496813243 24.8812846 1.112380393 1.023155245 0.187971107 0.075232148 1080.93786 1031829.678 0.024390116 0.02755268 3.19E-07 6.496813243 -0.089225148 S(ph)KSQSSSNCSNPISVPLRR ddPTM_A459_MK2206_30min_R1 1 SKSQSSSNCSNPISVPLRR 19 2 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.484)KS(0.354)QS(0.11)S(0.035)S(0.011)NCS(0.005)NPISVPLRR 64.749 0.028365 15601000 1305.8 1500.6 1346.6 1222.4 1430.3 1517.5 1852.3 1594.9 1405.6 1574.7 TRUE FALSE 1194.734853 1402.910667 1255.196544 1316.54946 1373.328122 1603.419539 1728.736447 1580.955957 1551.71715 1769.785724 0.675073166 0.792700861 0.70923645 0.743903311 0.775985535 0.905996425 0.97680551 0.893303599 0.876782499 1 10.78935898 -6.718337779 2.941311201 0.930278403 0.734930443 0.831343018 0.043555755 0.104341838 1.845510753 0.015531619 0.014804661 1.91E-07 6.718337779 -0.19534796 S(ph)KSTAALSGEAASCSPIIMPYK ddPTM_A459_MK2206_30min_R1 2 SKSTAALSGEAASCSPIIMPYK 22 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 S(0.423)KS(0.423)T(0.153)AALSGEAASCSPIIMPYK;S(0.474)KS(0.474)T(0.052)AALSGEAASCSPIIMPYK 122.65 1.78E-05 43506000 11983 8948.4 11599.4 12839.6 10898.5 7493.3 12359.3 11124.9 11072.1 9685.1 TRUE FALSE 10963.78292 8365.857534 10812.06505 13828.50822 10464.38967 7917.56417 11534.83365 11027.63617 12223.08442 10884.96331 1.007241147 0.768570118 0.993302847 1.270423044 0.961361961 0.727385472 1.059703494 1.013107335 1.122932992 1 13.41004892 S(ph)KSTAALSGEAASCSPIIMPYK ddPTM_A459_MK2206_30min_R2 3 SKSTAALSGEAASCSPIIMPYK 22 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 S(0.428)KS(0.428)T(0.144)AALSGEAASCSPIIMPYK;S(0.333)KS(0.333)T(0.333)AALS(0.002)GEAASCSPIIMPYK;S(0.407)KS(0.407)T(0.174)AALS(0.008)GEAAS(0.002)CS(0.001)PIIMPYK 109.28 2.87E-05 41986600 360350 374923 377597 340208 372224 339162 421630 285664 225824.3 355699 TRUE FALSE 387938.6731 356304.869 390185.8955 312411.9181 357608.6155 352069.0476 366269.4745 323001.2656 245466.0894 344092.5708 1.127425309 1.035491316 1.133956175 0.907929856 1.039280257 1.023181195 1.0644504 0.938704561 0.713372244 1 18.39243722 -7.967535102 4.878002026 0.846165592 1.042412457 0.439764355 0.087300411 0.153202792 8.928917984 0.049989846 0.021942824 1.08E-08 7.967535102 0.196246865 S(ph)KSYNTPLLNPVQEHEAEGAAAGGTSIR ddPTM_A459_MK2206_30min_R2 1 SKSYNTPLLNPVQEHEAEGAAAGGTSIR 28 1 P85299;P85299-5;P85299-2;P85299-4;P85299-3 P85299 PRR5 Proline-rich protein 5 1 S(0.32)KS(0.32)Y(0.268)NT(0.093)PLLNPVQEHEAEGAAAGGTSIR 68.927 0.00026496 6623100 10539 13638 13226 12761 10210 13787 13524 14727 11495 13111 TRUE FALSE 11345.87394 12960.75675 13666.94824 11718.38548 9809.104099 14311.67395 11748.28255 16651.86947 12494.81432 12683.18914 0.894560021 1.021884686 1.077564017 0.923930515 0.773394135 1.128397108 0.926287736 1.312908707 0.985147677 1 13.63062993 -7.188946472 2.043638827 1.094784957 0.955837407 0.138778743 0.129460297 0.586899442 4.799497671 0.061647487 0.041725128 6.47E-08 7.188946472 -0.13894755 S(ph)KTPPPPPQTAQTK ddPTM_A459_MK2206_30min_R1 1 SKTPPPPPQTAQTK 14 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.5)KT(0.5)PPPPPQTAQTK 100.07 0.0050864 22845000 6539.8 6747.5 6766.8 5704.1 6274.9 5392.6 6582.8 6466.6 6319 6092.1 TRUE FALSE 5983.555668 6308.236524 6307.488469 6143.43077 6024.957446 5697.924352 6143.673423 6410.063198 6975.882663 6846.835341 0.87391552 0.921336093 0.921226838 0.897265739 0.879962369 0.832198245 0.897301179 0.936208172 1.018847733 1 12.7412216 -8.053829895 2.689597887 1.009700713 0.889384837 0.789619282 0.024639583 0.139865666 1.880630677 0.022138256 0.00743813 8.83E-09 8.053829895 -0.120315876 S(ph)KTPPPPPQTAQTK ddPTM_A459_MK2206_30min_R2 2 SKTPPPPPQTAQTK 14 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.555)KT(0.445)PPPPPQTAQTK;S(0.797)KT(0.203)PPPPPQTAQTK 103.14 0.0039036 62722000 267840 287630 265610 301350 283280 240540 349070 276320 247940 307210 TRUE FALSE 288346.0363 273346.7125 274465.3048 276728.741 272157.0038 249693.9183 303236.6897 312435.9727 269505.373 297185.7629 0.970255215 0.919784009 0.923547959 0.931164193 0.91578076 0.840194752 1.020360756 1.051315412 0.906858291 1 18.18100548 -7.291216012 24.91004278 0.998909909 0.917838965 0.411619729 0.045470245 667.3021706 558237.7921 0.018857051 0.012715364 5.11E-08 7.291216012 -0.081070943 S(ph)KTPTGPELDTSYK ddPTM_A459_MK2206_30min_R1 1 SKTPTGPELDTSYK 14 1 Q8NF91;Q8NF91-4;A0A0C4DG40;E7ENN3;Q8NF91-2;A0A5F9ZHE1;A0A5F9ZH87;H0Y325;F8WAI0;Q5JV20;Q8NF91-9;H0Y326;Q8NF91-3;Q8NF91-11;Q8NF91-8;A0A5F9ZH86 Q8NF91 SYNE1 Nesprin-1 1 S(0.98)KT(0.019)PT(0.001)GPELDTSYK 111.12 0.0022185 14177000 1717.6 2018.1 1877.6 1934.1 1596.1 1935.6 2020.8 2015.6 2059.9 1800.6 TRUE FALSE 1571.509101 1886.721323 1750.153743 2083.064717 1532.523957 2045.191999 1885.996119 1997.977822 2274.033976 2023.671922 0.776563179 0.932325691 0.864840651 1.029349024 0.757298622 1.010634173 0.931967331 0.987303228 1.123716721 1 10.9827597 -7.562974353 1.134758385 1.055430676 0.887414198 0.375061291 0.086021215 0.544520381 1.297896178 0.065302202 0.029269324 2.74E-08 7.562974353 -0.168016478 S(ph)KTPTGPELDTSYK ddPTM_A459_MK2206_30min_R2 2 SKTPTGPELDTSYK 14 1 Q8NF91;Q8NF91-4;A0A0C4DG40;E7ENN3;Q8NF91-2;A0A5F9ZHE1;A0A5F9ZH87;H0Y325;F8WAI0;Q5JV20;Q8NF91-9;H0Y326;Q8NF91-3;Q8NF91-11;Q8NF91-8;A0A5F9ZH86 Q8NF91 SYNE1 Nesprin-1 1 S(0.813)KT(0.132)PT(0.054)GPELDTSYK;S(0.586)KT(0.389)PT(0.024)GPELDTSYK 75.911 0.023819 85847000 267610 180979 190044 188253 257970 200131 313720 164524 192058 237460 TRUE FALSE 288098.4274 171991.846 196379.9721 172872.1277 247840.8016 207747.1254 272528.1872 186027.8517 208762.8577 229711.6996 1.25417394 0.748729152 0.854897563 0.752561267 1.078921108 0.904381996 1.18639228 0.809831854 0.908803766 1 17.80946481 -6.275744382 24.88866399 0.978279945 0.888193733 0.050145203 0.16293264 2320.197377 4036804.566 0.049686078 0.056595104 5.30E-07 6.275744382 -0.090086211 S(ph)KTPVQAAAVSIVEKPVTR ddPTM_A459_MK2206_30min_R2 2 SKTPVQAAAVSIVEKPVTR 19 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 S(0.5)KT(0.5)PVQAAAVSIVEKPVTR;S(0.5)KT(0.5)PVQAAAVSIVEKPVTR 122.97 0.00047085 8696000 43141 48558 50927 52639 42624 38820 55757 48998 38657 57432 TRUE FALSE 46443.90813 46146.68033 52624.88076 48338.22532 40950.36759 40297.3223 48436.03892 55402.20684 42019.31598 55557.99854 0.835953586 0.830603721 0.947206201 0.870049796 0.737074205 0.725319906 0.871810364 0.997195873 0.75631443 1 15.76170701 -10.7375481 4.925836406 1.00002113 0.843936597 0.246744553 0.083078572 2.04E-05 3.25E-06 0.084956624 0.02060222 1.83E-11 10.7375481 -0.156084532 S(ph)LCHDEIENLLDSDHR ddPTM_A459_MK2206_30min_R2 3 SLCHDEIENLLDSDHR 16 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(1)LCHDEIENLLDSDHR;S(1)LCHDEIENLLDSDHR;S(1)LCHDEIENLLDSDHR 164.97 1.37E-05 7706300 32960.9 44289.6 36153.3 50885.3 46476.9 53967.5 54745.2 38979.1 42322.6 50833.4 TRUE FALSE 35484.41185 42090.24287 37358.63298 46727.80822 44651.98338 56021.27103 47557.08948 44073.80221 46003.74325 49174.71032 0.721598798 0.855932706 0.759712314 0.95024064 0.90802738 1.139229304 0.967104619 0.896269687 0.935516304 1 15.58562893 -5.81845991 5.236719177 0.972613153 0.786568687 0.607270349 0.070696052 0.141306326 7.904125458 0.020897585 0.032159582 1.52E-06 5.81845991 -0.186044465 S(ph)LCLSPSEASQMK ddPTM_A459_MK2206_30min_R2 2 SLCLSPSEASQMK 13 0 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 S(1)LCLSPSEASQMK;S(0.999)LCLS(0.001)PSEASQMK 89.747 0.027979 2206300 16788.2 11591.1 13280.4 13561.2 12634 9503.1 14748.7 11927.3 9049.6 15613.8 TRUE FALSE 18073.5175 11015.50283 13723.16191 12453.20658 12137.92568 9864.74713 12812.17797 13486.23906 9836.71785 15104.32298 1.19657912 0.729294709 0.908558558 0.824479627 0.803606073 0.653107533 0.848245763 0.892872794 0.651251821 1 13.8826739 -4.754271328 24.9996132 0.808285026 1.196579794 0.544909417 0.105273224 185.5747233 647163.0566 0.024809708 0.246208756 1.76E-05 4.754271328 0.388294769 S(ph)LDDLSAPPHHR ddPTM_A459_MK2206_30min_R2 2 SLDDLSAPPHHR 12 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(0.999)LDDLS(0.001)APPHHR;S(1)LDDLSAPPHHR 160.46 0.00031288 27684000 98057 123609 121526 159949 143982 136653 165796 125714 127979 147458 TRUE FALSE 105564.3193 117470.7568 125577.6162 146880.655 138328.5432 141853.4257 144026.786 142145.2514 139110.3821 142646.4575 0.740041647 0.823509808 0.880341639 1.029683159 0.969729958 0.994440578 1.009676571 0.996486375 0.975210913 1 17.12208439 -5.342548628 1.637644662 0.996580363 0.747819435 0.928484099 0.02419445 0.101139479 0.47618604 0.006808841 0.027908444 4.54E-06 5.342548628 -0.248760928 S(ph)LDEADSENKEEVSPLGSK ddPTM_A459_MK2206_30min_R1 2 SLDEADSENKEEVSPLGSK 19 1 Q6ZV73-2;Q6ZV73;F8VQX5 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 S(1)LDEADSENKEEVSPLGSK;S(0.952)LDEADS(0.047)ENKEEVSPLGSK 93.804 0.001072 16854200 3143.6 2410.47 2344.8 2611.8 2059.2 2669 1654.91 2197.3 2614.5 2244.7 TRUE FALSE 2876.220312 2253.547965 2185.641509 2812.961289 1977.177704 2820.116473 1544.513973 2178.089238 2886.286631 2522.790383 1.140094846 0.893275946 0.866358745 1.115019824 0.783726511 1.117856043 0.612224458 0.863365126 1.144084998 1 11.30080462 -6.263618951 24.99354523 0.907860859 0.985991621 0.05001706 0.166278034 720.5131657 8262230.52 0.050275016 0.059809988 5.45E-07 6.263618951 0.078130762 S(ph)LDEADSENKEEVSPLGSK ddPTM_A459_MK2206_30min_R2 2 SLDEADSENKEEVSPLGSK 19 1 Q6ZV73-2;Q6ZV73;F8VQX5 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 S(1)LDEADSENKEEVSPLGSK;S(0.994)LDEADS(0.006)ENKEEVSPLGSK 96.579 0.00089233 39707000 49714 58256 49098 50822 45448 31633 55036 52836 52690 35668 TRUE FALSE 53520.14206 55363.09175 50734.90281 46669.68003 43663.48316 32836.81598 47809.70709 59741.84661 57272.88096 34504.15608 1.551121608 1.604534005 1.47039976 1.352581408 1.265455763 0.951677123 1.385621691 1.731439148 1.659883546 1 15.07448253 -5.558314565 2.964831236 1.348813306 1.575899104 0.152375063 0.230809158 0.575398882 10.24625446 0.071369104 0.148308372 2.76E-06 5.558314565 0.227085798 S(ph)LDGAEFSR ddPTM_A459_MK2206_30min_R1 2 SLDGAEFSR 9 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(1)LDGAEFSR;S(1)LDGAEFSR 159.83 0.00089736 14918300 3123.5 2885.3 3031.5 2082.68 2646.4 2523.7 3806 2456 3736.4 4590.4 TRUE FALSE 2857.829923 2697.466446 2825.730226 2243.088374 2540.988284 2666.589713 3552.108684 2434.527451 4124.812151 5159.093408 0.553940334 0.522856679 0.547718369 0.434783439 0.492526125 0.516871765 0.688514125 0.471890555 0.799522673 1 12.33290185 -8.473819896 3.078607377 0.998867654 0.529524888 0.850307172 0.064803132 0.0810954 1.681230273 0.063542225 0.016962285 3.36E-09 8.473819896 -0.469342766 S(ph)LDGAEFSR ddPTM_A459_MK2206_30min_R2 2 SLDGAEFSR 9 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(1)LDGAEFSR;S(1)LDGAEFSR 116.55 0.0078149 27038000 103518 89813 92664 95314 92034 85045 110790 92255 89589 102414 TRUE FALSE 111443.4177 85353.01702 95753.37151 87526.54131 88420.28273 88281.44707 96243.13992 104313.0453 97381.28928 99072.23957 1.124870278 0.86152304 0.966500525 0.883461822 0.892482931 0.891081573 0.971444073 1.052898831 0.982932148 1 16.59619324 -7.523650097 8.801659285 1.013318107 0.930226095 0.177542621 0.071926305 0.16201367 162.8691281 0.03155485 0.019099496 2.99E-08 7.523650097 -0.083092012 S(ph)LDGAPIGVMDQSLMK ddPTM_A459_MK2206_30min_R1 2 SLDGAPIGVMDQSLMK 16 0 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 S(1)LDGAPIGVMDQSLMK;S(1)LDGAPIGVMDQSLMK 220.64 7.90E-11 14842700 3329.5 3803.2 4673.1 3724.2 4275.5 3659.8 3729.1 3857.3 3955.6 3515.8 TRUE FALSE 3046.308541 3555.610989 4355.902992 4011.038529 4105.197781 3867.014713 3480.338543 3823.576033 4366.798775 3951.363847 0.77095116 0.899843985 1.102379624 1.0151023 1.038931858 0.97865316 0.880794247 0.967659821 1.105137098 1 11.94813498 -4.952258447 3.807858562 1.005517982 0.778733563 0.592845154 0.062421425 0.168349145 4.926898523 0.016924365 0.082406172 1.12E-05 4.952258447 -0.226784419 S(ph)LDGLSEACGGAGSSGSAESGAGGGR ddPTM_A459_MK2206_30min_R2 2 SLDGLSEACGGAGSSGSAESGAGGGR 26 0 Q96GS4 Q96GS4 C17orf59 Uncharacterized protein C17orf59 1 S(0.973)LDGLS(0.027)EACGGAGSSGSAESGAGGGR;S(0.995)LDGLS(0.005)EACGGAGSSGSAESGAGGGR 246.98 1.33E-53 9172100 18877.7 17780.4 21324.4 25186.7 20065.9 25281 27913.7 20846.7 21331.2 30050 TRUE FALSE 20322.99123 16897.45119 22035.34485 23128.86604 19278.01194 26243.08617 24248.59766 23571.43527 23186.54922 29069.47096 0.699118028 0.581278249 0.758023594 0.795641107 0.663170374 0.902771372 0.834160267 0.810865643 0.797625428 1 14.8272172 -3.302066514 0.086288635 1.16881127 3.35E-12 0.634720929 0.068350517 75.19300177 0.690478015 1.813847688 10.83188779 0.000498808 3.302066514 -1.16881127 S(ph)LDGSGSEPAVCEMCGIVGTR ddPTM_A459_MK2206_30min_R1 2 SLDGSGSEPAVCEMCGIVGTR 21 0 Q969R5;H7C228;Q969R5-2;Q969R5-3 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 1 S(1)LDGSGSEPAVCEMCGIVGTR;S(0.998)LDGS(0.001)GS(0.001)EPAVCEMCGIVGTR 247.36 8.65E-39 16415100 1362.74 1419.69 1663.31 1313.88 1234.77 1196.24 1403.8 1391.8 1240.37 981.86 TRUE FALSE 1246.831807 1327.267923 1550.409151 1415.075265 1185.586496 1263.970075 1310.155063 1379.631639 1369.3109 1103.500229 1.129888127 1.202779925 1.404992142 1.282351582 1.074387177 1.145418951 1.187272126 1.250232309 1.240879579 1 10.10787121 -6.230413345 24.52987768 1.163874667 1.261986259 0.217030421 0.095372489 964.7705859 762768.7798 0.029417529 0.037972236 5.88E-07 6.230413345 0.098111592 S(ph)LDGSGSEPAVCEMCGIVGTR ddPTM_A459_MK2206_30min_R2 2 SLDGSGSEPAVCEMCGIVGTR 21 0 Q969R5;H7C228;Q969R5-2;Q969R5-3 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 1 S(1)LDGSGSEPAVCEMCGIVGTR;S(1)LDGSGSEPAVCEMCGIVGTR 224.4 4.58E-21 8463700 18083.6 13968.9 15316.7 13916 14778.8 15558.7 14981.1 12757.8 12914.6 15178.9 TRUE FALSE 19468.09432 13275.22474 15827.35113 12779.01828 14198.51005 16150.79723 13014.06357 14425.28826 14037.88856 14683.61374 1.325838085 0.904084306 1.077892092 0.870291096 0.966962923 1.099919783 0.886298415 0.982407228 0.956024097 1 13.84191945 -4.75464345 24.99995425 0.972356599 1.325838687 0.688728093 0.07145323 128.8356725 473901.1959 0.016890237 0.161543133 1.76E-05 4.75464345 0.353482088 S(ph)LDNFFAK ddPTM_A459_MK2206_30min_R2 1 SLDNFFAK 8 0 Q9UKY7;Q9UKY7-2 Q9UKY7 CDV3 Protein CDV3 homolog 1 S(1)LDNFFAK 106.29 0.01379 1400300 30861 21436 20415 23422 22204 23326 23175 15767 16262 20990 TRUE FALSE 33223.74189 20371.51941 21095.62591 21508.34768 21332.15939 24213.68728 20132.09466 17827.80104 17676.43937 20305.09802 1.636226619 1.003271168 1.038932483 1.0592585 1.050581454 1.192493001 0.991479807 0.877996305 0.870541937 1 14.30955437 -4.760811047 25 1.014512634 1.636227331 0.823372534 0.087067948 6.780871148 269585.8788 0.024119652 0.139612154 1.73E-05 4.760811047 0.621714697 S(ph)LDNNYSTPNER ddPTM_A459_MK2206_30min_R1 2 SLDNNYSTPNER 12 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;C9JZR2;O60716-19;O60716-11;O60716-13;O60716-21;O60716-9;O60716-17;O60716-10;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 S(1)LDNNYSTPNER;S(1)LDNNYSTPNER 165.78 0.00049709 15237000 3450.3 2459.5 2681.7 2199.78 3886.6 3438.4 3685.9 2490 2183.2 2202.93 TRUE FALSE 3156.833867 2299.386103 2499.673676 2369.207437 3731.788492 3633.079237 3440.020336 2468.230193 2410.151453 2475.8456 1.275052801 0.928727584 1.009624217 0.956928589 1.507278359 1.467409453 1.389432498 0.996924119 0.973465976 1 11.27370563 -4.433416412 21.51523759 1.153551441 11.49371859 0.030281797 0.216732959 2004.839969 484823.4807 0.058188575 5616.722083 3.69E-05 4.433416412 10.34016715 S(ph)LDNNYSTPNER ddPTM_A459_MK2206_30min_R2 2 SLDNNYSTPNER 12 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;C9JZR2;O60716-19;O60716-11;O60716-13;O60716-21;O60716-9;O60716-17;O60716-10;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 S(1)LDNNYSTPNER;S(0.999)LDNNYS(0.001)TPNER 156.2 0.00043309 20508900 28986 28247 26379 29978 22350 36085 20563.1 17051 33279 22479.7 TRUE FALSE 31205.19045 26844.29505 27258.46269 27528.70151 21472.4267 37458.23996 17863.14027 19279.62424 36173.54727 21746.18923 1.434972818 1.234436745 1.253482272 1.265909223 0.987411011 1.722519728 0.821437728 0.88657484 1.663443047 1 14.40847499 -1.522878745 0.115386441 1.009898723 2.035173226 0.05627864 0.286677063 337.5942899 2.707392548 2.239248848 55.35330503 0.03 1.522878745 1.025274503 S(ph)LDQPFLSK ddPTM_A459_MK2206_30min_R2 2 SLDQPFLSK 9 0 G5E9Y3;Q8WWN8;Q8WWN8-2 G5E9Y3 ARAP3 "Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3" 1 S(1)LDQPFLSK;S(1)LDQPFLSK 101.35 0.017103 5674000 44100 60740 48002 47192 38068 43210 66768 48281 46953 39198 TRUE FALSE 47476.32991 57723.73992 49602.36272 43336.26264 36573.25904 44854.38683 58001.2814 54591.49247 51036.88707 37918.97247 1.252046847 1.522291775 1.308114632 1.142864899 0.964510815 1.182900904 1.529611105 1.439688075 1.345945941 1 15.21063225 -5.517165675 24.23434369 1.245548287 1.394177801 0.107806495 0.178555488 410.4546997 1741107.706 0.052854804 0.095537443 3.04E-06 5.517165675 0.148629515 S(ph)LDSESISPGDFHR ddPTM_A459_MK2206_30min_R1 1 SLDSESISPGDFHR 14 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 S(0.5)LDS(0.5)ES(0.001)ISPGDFHR 97.235 0.010893 0 525.92 351.42 459.53 407.38 599.07 736.02 681.37 604.68 470.21 478.15 TRUE FALSE 481.1877423 328.5424941 428.3383839 438.7564782 575.2077733 777.6928163 635.9170505 599.3933465 519.0900122 537.3868318 0.895421536 0.611370571 0.797076442 0.816463025 1.07037936 1.447175052 1.183350638 1.115385251 0.965952237 1 9.06981716 -6.279844746 3.453178627 1.160923815 0.76178587 0.605863666 0.138813051 0.159753255 4.054758508 0.045580517 0.055575624 5.25E-07 6.279844746 -0.399137945 S(ph)LDYLNLDK ddPTM_A459_MK2206_30min_R1 2 SLDYLNLDK 9 0 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 S(1)LDYLNLDK;S(1)LDYLNLDK 163.45 0.00095798 8647900 3705.2 3965.2 3401 3402 3563.4 2901.1 3159.4 3379.4 3404.8 2942.4 TRUE FALSE 3390.053283 3707.064759 3170.149596 3664.022629 3421.462232 3065.357775 2948.642191 3349.854262 3758.741144 3306.926726 1.025137103 1.12099997 0.958639201 1.10798422 1.03463503 0.926950619 0.891656343 1.012981097 1.13662668 1 11.69127536 -6.538937708 24.48878873 0.987270387 1.053783752 0.128715817 0.072965562 377.1050192 575053.633 0.02491406 0.02492138 2.89E-07 6.538937708 0.066513365 S(ph)LDYLNLDK ddPTM_A459_MK2206_30min_R2 1 SLDYLNLDK 9 0 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 S(0.996)LDY(0.004)LNLDK 110.31 0.010928 3197000 9174.4 9061.8 8378.2 11886 9165.9 8273.5 13612 6817 11259 9238.9 TRUE FALSE 9876.799118 8611.804189 8657.525006 10914.87578 8806.000711 8588.35384 11824.72805 7708.005306 12238.28747 8937.43545 1.105104386 0.96356547 0.968681123 1.221253663 0.985293909 0.960941636 1.323056051 0.862440389 1.369328767 1 13.1256452 S(ph)LEDISSDSSNQAK ddPTM_A459_MK2206_30min_R1 2 SLEDISSDSSNQAK 14 0 A0A0U1RR07;Q9HCH5-15;Q9HCH5-14;Q9HCH5-6;Q9HCH5;Q9HCH5-13;A0A0U1RRJ3;A0A0U1RQP0;Q9HCH5-11;Q9HCH5-7;Q9HCH5-8;A0A0U1RQH1;Q9HCH5-12 A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 S(1)LEDISSDSSNQAK;S(1)LEDISSDSSNQAK 229.48 2.95E-13 4663000 1723.99 1739.55 1802.75 1364.14 1818.04 1717.68 1547.01 1759.36 1671.08 1597.86 TRUE FALSE 1577.355597 1626.304979 1680.384353 1469.206299 1745.623617 1814.933557 1443.811786 1743.978101 1844.794746 1795.81496 0.87835085 0.905608325 0.935722438 0.818127887 0.972050938 1.010646196 0.803986946 0.971134632 1.027274406 1 10.81042299 -7.990714697 24.99749222 1.008826337 0.906812783 0.364929342 0.059616352 208.0568703 560121.7685 0.032641846 0.015649151 1.02E-08 7.990714697 -0.102013554 S(ph)LEDISSDSSNQAK ddPTM_A459_MK2206_30min_R2 2 SLEDISSDSSNQAK 14 0 A0A0U1RR07;Q9HCH5-15;Q9HCH5-14;Q9HCH5-6;Q9HCH5;Q9HCH5-13;A0A0U1RRJ3;A0A0U1RQP0;Q9HCH5-11;Q9HCH5-7;Q9HCH5-8;A0A0U1RQH1;Q9HCH5-12 A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 S(1)LEDISSDSSNQAK;S(1)LEDISSDSSNQAK 222.75 4.53E-09 12907000 51002 55414 52789 53255 49644 38754 63837 50392 43349 54190 TRUE FALSE 54906.75233 52662.22134 54548.95891 48903.89615 47694.72712 40228.81063 55455.12522 56978.40742 47119.41766 52421.78474 1.047403338 1.004586578 1.040578057 0.932892621 0.909826465 0.767406353 1.057864121 1.086922311 0.89885184 1 15.67787885 -5.75964913 24.99885126 0.949304596 1.028229063 0.158359229 0.084754516 99.17508466 1384819.064 0.025279132 0.041050077 1.74E-06 5.75964913 0.078924467 S(ph)LEDLRAPK ddPTM_A459_MK2206_30min_R1 1 SLEDLRAPK 9 1 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3 DENND1A DENN domain-containing protein 1A 1 S(1)LEDLRAPK 72.2 0.037465 7739200 7476.2 8376.9 8024.5 7536.8 7580.8 6499.2 6920.7 7928.4 6158.7 4533.6 TRUE FALSE 6840.309931 7831.562287 7479.819298 8117.285642 7278.840683 6867.179088 6459.032731 7859.082835 6798.918904 5095.256595 1.34248586 1.537030009 1.467996588 1.593106351 1.428552331 1.347759227 1.267656027 1.542431218 1.334362417 1 12.31493909 -6.659165996 3.490048997 1.329385134 1.489684781 0.277295886 0.139100881 0.363662143 8.640783279 0.046791555 0.046136411 2.19E-07 6.659165996 0.160299647 S(ph)LEDVTAEYIHK ddPTM_A459_MK2206_30min_R1 1 SLEDVTAEYIHK 12 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 S(0.993)LEDVT(0.007)AEYIHK 143.58 0.00053849 3085400 1775.6 1781.6 1444.9 1360 2206.8 1848.9 1994.3 1646.1 1584.2 1463.3 TRUE FALSE 1624.575896 1665.617516 1346.824214 1464.747436 2118.898483 1953.58312 1861.263886 1631.708321 1748.883259 1644.584651 0.987833551 1.012789165 0.818944901 0.890648854 1.288409497 1.187888455 1.131753166 0.992170467 1.063419422 1 10.68350755 -6.229202654 24.98774438 1.115136792 0.925884504 0.469513098 0.09524284 626.0650871 485283.6833 0.030354962 0.039184847 5.90E-07 6.229202654 -0.189252288 S(ph)LEEDLETLK ddPTM_A459_MK2206_30min_R1 1 SLEEDLETLK 10 0 P48681 P48681 NES Nestin 1 S(1)LEEDLETLK 84.687 0.03752 1461100 1279.2 1201.5 1442.9 1240.2 1114.6 1103.7 1398.5 1311.6 1086.1 773.84 TRUE FALSE 1170.397323 1123.282132 1344.959968 1335.720419 1070.203122 1166.19054 1305.208617 1300.132819 1199.003982 869.7091414 1.345734185 1.291560682 1.546448007 1.535824283 1.230529922 1.340897186 1.500741518 1.494905317 1.378626399 1 9.764389188 -8.577622982 19.30082036 0.999999998 1.411858021 0.588440724 0.102488223 1573.994409 554933.3554 0.10532815 0.027195611 2.64E-09 8.577622982 0.411858023 S(ph)LEEDLETLK ddPTM_A459_MK2206_30min_R2 2 SLEEDLETLK 10 0 P48681 P48681 NES Nestin 1 S(1)LEEDLETLK;S(1)LEEDLETLK 121.29 0.0035994 0 12075.5 12690.8 13866.3 12765.8 14037.3 12632.3 15234.3 11298.2 13615.7 14080.6 TRUE FALSE 13000.00956 12060.59333 14328.59552 11722.7933 13486.12507 13113.03103 13234.01811 12774.91353 14799.96897 13621.15118 0.954398743 0.88543128 1.051937192 0.860631613 0.990087027 0.962696241 0.971578535 0.937873266 1.086543185 1 13.73356102 -8.249955568 24.89508071 1.043271594 0.952208784 0.318179953 0.053541079 677.1881584 1468043.942 0.034145684 0.012668874 5.62E-09 8.249955568 -0.09106281 S(ph)LEEMSLR ddPTM_A459_MK2206_30min_R1 2 SLEEMSLR 8 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(1)LEEMSLR;S(1)LEEMSLR 128.03 0.0044311 9769300 1662.11 2170.4 1897.19 1865.62 2088.2 2095.04 2385.81 1505.23 2428.7 2318.2 TRUE FALSE 1520.738816 2029.106566 1768.414029 2009.310376 2005.022572 2213.659354 2226.656968 1492.069933 2681.172056 2605.396118 0.583688141 0.778809238 0.678750543 0.771211088 0.769565349 0.849644067 0.854632796 0.572684485 1.02908423 1 11.34728702 -12.43003934 0.039724525 2.072744005 5.90E-10 0.427575721 0.110172391 581.6596267 2.554639245 98.95739125 43.75341538 3.72E-13 12.43003934 -2.072744005 S(ph)LEEMSLR ddPTM_A459_MK2206_30min_R2 4 SLEEMSLR 8 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(0.993)LEEMS(0.007)LR;S(1)LEEMSLR;S(1)LEEMSLR;S(1)LEEMSLR 120.27 0.0074671 7410900 11232.8 14811.5 13291.1 17117 12596.3 16686.1 16660.8 11363.1 12559.8 17738.6 TRUE FALSE 12092.7918 14075.98245 13734.21864 15718.48635 12101.70597 17321.10123 14473.21695 12848.29619 13652.2287 17159.79093 0.704716733 0.820288691 0.800372143 0.916006868 0.705236213 1.009400481 0.843437837 0.748744331 0.795594116 1 14.06674436 -3.896959117 1.115447193 0.847866639 2.60E-08 0.18217488 0.094194718 18.55366537 4.390229173 0.027915276 29.59001428 0.000126777 3.896959117 -0.847866613 S(ph)LEGGGCPAR ddPTM_A459_MK2206_30min_R1 3 SLEGGGCPAR 10 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 S(1)LEGGGCPAR;S(1)LEGGGCPAR;S(1)LEGGGCPAR 109.16 0.010241 88229700 3175.85 2703.97 2788.53 2286.69 3070.97 2353.77 3036.22 2765.75 2270.28 2293.77 TRUE FALSE 2905.72728 2527.941062 2599.252353 2462.81126 2948.646762 2487.038423 2833.679304 2741.569339 2506.28373 2577.939545 1.127151056 0.980605254 1.008267381 0.955340968 1.14379981 0.964738847 1.099203164 1.063473092 0.97220423 1 11.33200272 -4.745152057 24.76163928 1.0249288 1.127151385 0.221387505 0.059364524 1360.118466 2067663.835 0.014273008 0.36747435 1.80E-05 4.745152057 0.102222584 S(ph)LEGGGCPAR ddPTM_A459_MK2206_30min_R2 2 SLEGGGCPAR 10 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 S(1)LEGGGCPAR;S(1)LEGGGCPAR 121.36 0.0048008 89087000 41072.2 41910.1 42239.3 42982.2 40075.3 39758.9 35727.8 36875.7 38675.9 34154.8 TRUE FALSE 44216.71921 39828.90538 43647.53718 39470.41677 38501.74236 41271.9528 31036.69694 41695.4806 42039.85987 33040.33167 1.338264992 1.205463243 1.321038106 1.194613213 1.165295274 1.249138574 0.939357911 1.261957084 1.27238008 1 15.01194055 -6.059356268 1.347200831 1.148583909 1.285196037 0.247276485 0.107729355 0.712565407 2.620202938 0.039529849 0.067922667 8.72E-07 6.059356268 0.136612129 S(ph)LELNGAVEPSEGAPR ddPTM_A459_MK2206_30min_R1 2 SLELNGAVEPSEGAPR 16 0 F5GYK2;Q9NRL3;Q9NRL3-3;R4GN16;M0R2A7;M0QYS2;M0R0P4;Q9NRL3-2 F5GYK2 STRN4 Striatin-4 1 S(1)LELNGAVEPSEGAPR;S(1)LELNGAVEPSEGAPR 138.77 0.00040382 10819900 2798.8 3191.5 2746.1 2622.01 3087.4 2335.02 2837.14 2569.26 2731.61 2780.58 TRUE FALSE 2560.747363 2983.73277 2559.702383 2823.957665 2964.42232 2467.226815 2647.879567 2546.797231 3015.570635 3125.059243 0.819423622 0.954776386 0.819089235 0.903649322 0.948597159 0.789497614 0.847305399 0.814959664 0.96496431 1 11.60966782 -8.422737222 5.05980973 0.998834773 0.865477203 0.445349241 0.054196593 0.191080946 6.987143864 0.051713047 0.013461968 3.78E-09 8.422737222 -0.133357569 S(ph)LELSSLAGPGEDPLSADSLGKPTR ddPTM_A459_MK2206_30min_R2 1 SLELSSLAGPGEDPLSADSLGKPTR 25 1 Q13615-3;Q13615-2;Q13615;G5E953 Q13615-3 MTMR3 Myotubularin-related protein 3 1 S(0.996)LELS(0.003)SLAGPGEDPLSADSLGKPTR 90.899 2.38E-05 10979000 65066 90404 78953 110630 100120 110850 111210 70249 100900 104050 TRUE FALSE 70047.50299 85914.66882 81585.25361 101591.1751 96188.78574 115068.4744 96607.99341 79430.7855 109676.0996 100654.857 0.695917764 0.85355711 0.810544628 1.009302264 0.955629848 1.143198429 0.959794651 0.789140116 1.089625507 1 16.61905726 -5.452740031 1.449332078 0.988715454 0.738214338 0.488369144 0.095541116 0.455668718 1.71987178 0.030436336 0.113918731 3.53E-06 5.452740031 -0.250501116 S(ph)LEPAENVHGAGGGAFPASQTPSK ddPTM_A459_MK2206_30min_R2 2 SLEPAENVHGAGGGAFPASQTPSK 24 0 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 S(1)LEPAENVHGAGGGAFPASQTPSK;S(1)LEPAENVHGAGGGAFPASQTPSK 117.51 9.96E-08 14756800 84298 51178 58473 63818 52180 55556 72849 55999 47151 71618 TRUE FALSE 90751.91969 48636.57494 60422.46064 58603.86526 50131.15102 57670.22251 63283.83879 63318.26157 51252.10875 69281.11053 1.30990856 0.702017831 0.872134701 0.845885189 0.723590466 0.832409037 0.913435687 0.913932544 0.739770312 1 16.08017444 -4.751406388 24.99385748 0.835341093 1.309909527 0.713878573 0.08958718 215.7730168 537489.7817 0.021449732 0.284372508 1.77E-05 4.751406388 0.474568435 S(ph)LEPAENVHGAGGGAFPASQTPSKPASADGHR ddPTM_A459_MK2206_30min_R1 4 SLEPAENVHGAGGGAFPASQTPSKPASADGHR 32 1 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 S(1)LEPAENVHGAGGGAFPASQTPSKPASADGHR;S(1)LEPAENVHGAGGGAFPASQTPSKPASADGHR;S(1)LEPAENVHGAGGGAFPASQTPSKPASADGHR;S(1)LEPAENVHGAGGGAFPASQTPSKPASADGHR 134.24 3.53E-19 170625000 12346.8 6347.5 7726.9 5282.46 13817.6 14144.9 14844.5 10466.4 7607.6 8742.6 TRUE FALSE 11296.63982 5934.276596 7202.419556 5689.315984 13267.21573 14945.77201 13854.25049 10374.89337 8398.437244 9825.699291 1.149703394 0.603954632 0.73301852 0.579024028 1.350256642 1.521089906 1.410001475 1.055893638 0.854741937 1 13.26234437 -6.265201437 24.99486567 1.228146798 0.752433915 0.439030319 0.237753669 302.6240932 2010611.732 0.077100333 0.09077785 5.43E-07 6.265201437 -0.475712883 S(ph)LEPAENVHGAGGGAFPASQTPSKPASADGHR ddPTM_A459_MK2206_30min_R2 4 SLEPAENVHGAGGGAFPASQTPSKPASADGHR 32 1 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 S(1)LEPAENVHGAGGGAFPASQTPSKPASADGHR;S(1)LEPAENVHGAGGGAFPASQTPSKPASADGHR;S(0.993)LEPAENVHGAGGGAFPAS(0.003)QT(0.002)PS(0.001)KPAS(0.001)ADGHR;S(1)LEPAENVHGAGGGAFPASQTPSKPASADGHR 115.93 8.08E-17 187306000 26448.5 37238.5 29840.9 45854.4 37386.2 46081.4 54760.3 35282.1 38209.8 34702 TRUE FALSE 28473.4175 35389.29024 30835.78071 42107.94884 35918.22994 47835.05997 47570.20683 39893.59161 41533.21934 33569.67658 0.848188615 1.054204087 0.918560554 1.254344788 1.069960559 1.42494849 1.417058836 1.188381768 1.237224292 1 15.03487102 -5.764248411 24.98962668 1.244837775 0.951706349 0.488960535 0.133522862 59.19077299 526579.0069 0.037448199 0.058440482 1.72E-06 5.764248411 -0.293131426 S(ph)LEQDALR ddPTM_A459_MK2206_30min_R1 2 SLEQDALR 8 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 S(1)LEQDALR;S(1)LEQDALR 125.72 0.005018 5909400 2546.4 2311.4 1887.98 2097.4 3262.7 3078 2695 2482.12 2660 2580.1 TRUE FALSE 2329.815308 2160.92744 1759.829178 2258.942111 3132.73975 3252.2737 2515.221467 2460.419087 2936.516519 2899.742267 0.803455995 0.745213623 0.606891584 0.779014789 1.080351101 1.121573368 0.867394836 0.848495783 1.012681904 1 11.50170896 -6.112098969 5.404446059 0.980386495 0.717030872 0.656889186 0.090753205 0.155506491 6.392625282 0.02961914 0.038764213 7.73E-07 6.112098969 -0.263355623 S(ph)LEQDALR ddPTM_A459_MK2206_30min_R2 2 SLEQDALR 8 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 S(1)LEQDALR;S(1)LEQDALR 129.82 0.0039786 9645300 25803.8 21199.6 25608 28795 25261.3 27493 30525.2 19311.5 34091 25874 TRUE FALSE 27779.35877 20146.85869 26461.75794 26442.35639 24269.41443 28539.26538 26517.20457 21835.57936 37056.17356 25029.7335 1.109854357 0.804917028 1.057212932 1.056437792 0.969623366 1.140214513 1.059428163 0.872385611 1.480486141 1 14.61135531 -6.941132542 0.640923072 1.131946191 0.976103271 0.094173253 0.164170325 1.932942302 1.693157993 0.130120638 0.118254796 1.15E-07 6.941132542 -0.155842921 S(ph)LEQEEPFDLSQKR ddPTM_A459_MK2206_30min_R1 1 SLEQEEPFDLSQKR 14 1 Q8N895 Q8N895 ZNF366 Zinc finger protein 366 1 S(1)LEQEEPFDLSQKR 81.565 0.016248 5846300 1221.5 1205.6 1094 1494.8 2114.6 1333.5 880.86 1436.5 402.19 285.43 TRUE FALSE 1117.605011 1127.115221 1019.742328 1609.929755 2030.371004 1409.001618 822.0994366 1423.940832 443.9990898 320.7912233 3.483901458 3.513547563 3.178834875 5.018621577 6.329259833 4.392269848 2.562724217 4.438839746 1.384074929 1 8.325490861 -8.296965484 5.716756596 1.10868943 4.126915737 0.577139583 1.000847737 0.160694028 14.91799483 1.011830299 0.27798883 5.05E-09 8.296965484 3.018226306 S(ph)LEQNIQLPAALLSR ddPTM_A459_MK2206_30min_R2 1 SLEQNIQLPAALLSR 15 0 P33993;P33993-3 P33993 MCM7 DNA replication licensing factor MCM7 1 S(1)LEQNIQLPAALLSR 118.05 0.0020701 1349300 3967.1 3193.4 3759 5626.9 4340.2 4717.7 3485 1277.2 2798.8 4820.8 TRUE FALSE 4270.824226 3034.8204 3884.323184 5167.16427 4169.78194 4897.235379 3027.415314 1444.134425 3042.234565 4663.497691 0.915798508 0.650760567 0.832920576 1.108001893 0.894131876 1.050120683 0.649172684 0.309667662 0.652350396 1 12.18719669 -7.405314931 6.248031592 0.58632831 0.900761857 0.270026058 0.196254129 0.266681074 12.66761551 0.083017226 0.055364055 3.93E-08 7.405314931 0.314433547 S(ph)LESCLLDLR ddPTM_A459_MK2206_30min_R1 4 SLESCLLDLR 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 S(0.993)LES(0.007)CLLDLR;S(1)LESCLLDLR;S(1)LESCLLDLR;S(0.999)LES(0.001)CLLDLR 206.1 9.01E-05 30960800 3115.9 3305.15 3843.93 4099.85 4070.98 3945.23 3667.04 3898.57 3070.09 3154.16 TRUE FALSE 2850.876343 3089.984134 3583.014741 4415.621157 3908.824246 4168.605513 3422.418452 3864.485214 3389.236842 3544.921153 0.804214317 0.871665123 1.010745962 1.245619004 1.102654778 1.175937442 0.965442757 1.090147015 0.956082433 1 11.79153782 -5.284904636 3.118053059 1.083095478 0.82398224 0.542032272 0.086409163 0.183765188 3.613780265 0.023671699 0.065853347 5.19E-06 5.284904636 -0.259113238 S(ph)LESCLLDLR ddPTM_A459_MK2206_30min_R2 5 SLESCLLDLR 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 S(1)LESCLLDLR;S(1)LESCLLDLR;S(1)LESCLLDLR;S(0.994)LES(0.006)CLLDLR;S(1)LESCLLDLR 151.79 0.00065854 7388600 28839.6 34663.7 34303.8 41333.5 40566.7 32826.2 42056 31337.9 31142.2 39681.6 TRUE FALSE 31047.58195 32942.35106 35447.47157 37956.42083 38973.84753 34075.42404 36533.99668 35433.87113 33850.89226 38386.79264 0.808808963 0.858168886 0.923428844 0.988788545 1.015293148 0.887686147 0.951733504 0.923074544 0.881836953 1 15.2283224 -5.158798982 2.403588661 0.947157868 0.812970953 0.551258977 0.04224892 0.257805622 2.708526439 0.011946566 0.050163344 6.94E-06 5.158798982 -0.134186914 S(ph)LESINSR ddPTM_A459_MK2206_30min_R1 3 SLESINSR 8 0 P62888;E5RJH3;A0A0C4DH44;E5RI99 P62888 RPL30 60S ribosomal protein L30 1 S(1)LESINSR;S(0.998)LES(0.002)INSR;S(1)LESINSR 128.51 0.0043096 64946600 3235.89 3102.79 3079.14 2846.08 2896.31 2855.3 3211.56 3033.91 2666.12 2310.13 TRUE FALSE 2960.660563 2900.797807 2870.136556 3065.285575 2780.94384 3016.964618 2997.322692 3007.384845 2943.272715 2596.326345 1.140326819 1.117270105 1.10546063 1.180624146 1.071107199 1.162012866 1.15444759 1.158323125 1.133629723 1 11.34225602 -8.614331473 19.17187821 1 1.13598727 0.648348033 0.030033181 10146.6871 2127119.232 0.028307105 0.007308863 2.43E-09 8.614331473 0.13598727 S(ph)LESINSR ddPTM_A459_MK2206_30min_R2 3 SLESINSR 8 0 P62888;E5RJH3;A0A0C4DH44;E5RI99 P62888 RPL30 60S ribosomal protein L30 1 S(0.995)LES(0.005)INSR;S(1)LESINSR;S(0.998)LES(0.002)INSR 108.43 0.012879 64871000 67915 75435 87799 80601 85641 97973 74468 62018 66142 78936 TRUE FALSE 73114.62462 71689.00759 90726.17484 74015.64047 82278.30403 101701.4312 64690.26215 70123.96554 71894.9116 76360.32478 0.95749494 0.938825336 1.188132385 0.969294469 1.077500708 1.331862213 0.847171124 0.918329849 0.941521815 1 16.22053562 S(ph)LETENR ddPTM_A459_MK2206_30min_R2 1 SLETENR 7 0 P05783;F8VZY9;CON__P05784 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(1)LETENR 120.31 0.0095171 45854000 94185 91211 68764 76392 72485 82431 67260 45814 52490 92542 TRUE FALSE 101395.876 86681.59437 71056.55744 70150.52923 69638.87469 85567.96947 58428.68121 51802.0471 57055.48532 89522.36212 1.132631821 0.968267507 0.793729698 0.783609006 0.777893624 0.955827879 0.652671353 0.578649243 0.637332215 1 16.44996048 -1.522878745 0.561222584 0.732016536 20.79963708 0.454653996 0.126476778 125.0696615 1.104954029 0.06301849 3038.355901 0.03 1.522878745 20.06762054 S(ph)LEVIPEKANDETGE ddPTM_A459_MK2206_30min_R1 2 SLEVIPEKANDETGE 15 1 Q9UPR0;Q9UPR0-3 Q9UPR0 PLCL2 Inactive phospholipase C-like protein 2 1 S(1)LEVIPEKANDETGE;S(1)LEVIPEKANDETGE 139.3 0.0018709 8698800 2236.14 2068.3 2241.88 1932.67 1769.16 1713.02 1593.49 2237.72 1603.95 1281.22 TRUE FALSE 2045.944551 1933.653294 2089.707432 2081.524578 1698.690611 1810.009712 1487.19119 2218.15585 1770.686342 1439.947206 1.420846918 1.34286402 1.451238922 1.445556177 1.179689508 1.256997273 1.032809525 1.540442483 1.229688376 1 10.4918002 -6.258663264 24.9958723 1.227456537 1.412544367 0.339094892 0.140802984 328.4591519 2957410.31 0.041864894 0.051623721 5.51E-07 6.258663264 0.18508783 S(ph)LGDEGLNR ddPTM_A459_MK2206_30min_R1 1 SLGDEGLNR 9 0 Q01970-2;Q01970 Q01970-2 PLCB3 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3" 1 S(1)LGDEGLNR 122.69 0.0058642 3508800 1524.9 1148 932.74 1055 1020.9 1345.5 1317.4 899.05 1171.2 1284.5 TRUE FALSE 1395.199247 1073.264991 869.4282076 1136.256283 980.2353912 1421.681047 1229.51865 891.1897006 1292.950431 1443.633557 0.96644972 0.743446968 0.602249929 0.787080819 0.679005684 0.984793572 0.85168334 0.61732404 0.895622317 1 10.49548887 -6.728999876 24.99995629 0.844830196 0.748193212 0.144229526 0.131647408 461.3097456 355513.676 0.044205693 0.04420252 1.87E-07 6.728999876 -0.096636984 S(ph)LGDEGLNR ddPTM_A459_MK2206_30min_R2 3 SLGDEGLNR 9 0 Q01970-2;Q01970 Q01970-2 PLCB3 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3" 1 S(1)LGDEGLNR;S(1)LGDEGLNR;S(1)LGDEGLNR 127.83 0.0044695 44677000 186751 121922 171462 162937 85471 191584 111537 93186 157412 135603 TRUE FALSE 201048.8001 115867.5308 177178.4575 149624.5259 82114.97908 198874.8634 96892.05792 105365.7302 171103.4112 131178.2852 1.532637813 0.883282859 1.350669108 1.14061962 0.62597997 1.51606543 0.738628789 0.803225397 1.304357737 1 17.0011694 -4.750003303 24.91429021 1.039489852 1.532638943 0.225870447 0.273427851 750.1053505 1634048.96 0.065522469 1.00467282 1.78E-05 4.750003303 0.493149092 S(ph)LGEISALTSK ddPTM_A459_MK2206_30min_R2 2 SLGEISALTSK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 S(1)LGEISALTSK;S(1)LGEISALTSK 104.17 0.01155 6132100 32186 30207 30745 33938 30015 26834 33660 22224 24995 34083 TRUE FALSE 34650.18491 28706.96431 31770.02296 31165.15684 28836.46029 27855.18667 29240.40157 25128.75311 27169.01992 32970.8745 1.050933147 0.87067646 0.963578414 0.945232946 0.874604047 0.844842216 0.886855505 0.762150034 0.824030916 1 15.00890453 -6.328504713 2.73163763 0.850288066 0.953741288 0.28684997 0.069796581 0.338100806 4.959359027 0.022254697 0.02672826 4.69E-07 6.328504713 0.103453222 S(ph)LGEQDQMTLRPPEK ddPTM_A459_MK2206_30min_R1 1 SLGEQDQMTLRPPEK 15 1 P48681 P48681 NES Nestin 1 S(1)LGEQDQMTLRPPEK 120.77 0.0088295 0 436.41 397.2 392.1 422.49 464.98 376.83 677.7 352.14 457.46 627.75 TRUE FALSE 399.2910378 371.3422078 365.4853445 455.030253 446.458862 398.1657889 632.4918695 349.0612771 505.014604 705.5204093 0.565952498 0.526338009 0.51803653 0.644956896 0.632807862 0.564357577 0.896489827 0.494757164 0.715804387 1 9.462544007 -14.52287875 0.134721594 2.307534461 0.467543531 0.591444682 0.102819151 99.28168523 0.829399554 34.86784693 0.692651059 3.00E-15 14.52287875 -1.83999093 S(ph)LGEQDQMTLRPPEK ddPTM_A459_MK2206_30min_R2 1 SLGEQDQMTLRPPEK 15 1 P48681 P48681 NES Nestin 1 S(1)LGEQDQMTLRPPEK 64.275 0.038145 10386000 38994 43927 34941 37610 37022 28463 40656 31951 33936 42025 TRUE FALSE 41979.41062 41745.64906 36105.9155 34537.14269 35568.33026 29546.17941 35317.81836 36127.1054 36887.69194 40653.72769 1.032609136 1.026859071 0.88813296 0.849544301 0.874909443 0.726776635 0.868747354 0.888654189 0.907363089 1 15.31110002 -5.294522196 3.665942845 0.863119973 1.034252781 0.4810959 0.063520045 0.173006775 4.967518766 0.01691489 0.042902693 5.08E-06 5.294522196 0.171132808 S(ph)LGGAVGSVASGAR ddPTM_A459_MK2206_30min_R2 2 SLGGAVGSVASGAR 14 0 Q8NHG8 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 1 S(1)LGGAVGSVASGAR;S(1)LGGAVGSVASGAR 103.66 0.0067335 12778000 36756 47384 40082 47830 48917 38208 55195 39192 41757 49611 TRUE FALSE 39570.06762 45030.97946 41418.31387 43922.136 46996.27279 39662.03221 47947.8302 44314.52897 45388.94838 47992.19713 0.824510441 0.938297935 0.863021832 0.915193274 0.979248203 0.826426681 0.999075539 0.923369456 0.945756833 1 15.55051224 -1.522878748 0.08566447 1.057598501 0.537504045 0.352277152 0.049803844 201.4666293 1.253388776 1.059407847 12.33943612 0.03 1.522878748 -0.520094456 S(ph)LGPGAGPR ddPTM_A459_MK2206_30min_R2 2 SLGPGAGPR 9 0 H3BUV2;P78549-3;P78549-2;P78549 H3BUV2 NTHL1 Endonuclease III-like protein 1 1 S(1)LGPGAGPR;S(1)LGPGAGPR 102.06 0.016467 22402000 15295.6 16373.6 17067.7 22994.8 20462.7 23630.5 23732.9 19475.6 22427.6 22538 TRUE FALSE 16466.6429 15560.51083 17636.7286 21116.05128 19659.23158 24529.77524 20616.74172 22021.12779 24378.31211 21802.58691 0.755260968 0.713700209 0.808928256 0.968511277 0.901692614 1.125085539 0.945609886 1.010023622 1.118138513 1 14.4122117 -5.781339504 1.162193117 1.029644088 0.713191529 0.775616495 0.063383303 0.236496657 0.625848535 0.022458335 0.059174474 1.65E-06 5.781339504 -0.316452559 S(ph)LGSVQAPSYGAR ddPTM_A459_MK2206_30min_R1 2 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.573)LGS(0.364)VQAPS(0.063)YGAR;S(0.995)LGS(0.005)VQAPSYGAR 160.87 0.00036384 283207000 2180.64 2175.38 1969.69 1637.44 2204.58 1784.93 2390.33 2114.32 1958.96 1864.79 TRUE FALSE 1995.165117 2033.762367 1835.992931 1763.555913 2116.76691 1885.991194 2230.875447 2095.834723 2162.600902 2095.814264 0.951976113 0.970392464 0.876028455 0.841465746 1.009997378 0.899884702 1.064443298 1.000009762 1.031866678 1 11.03329515 -7.256003552 24.96911217 1.024080749 0.924869026 0.507661933 0.047821327 388.2465193 1783389.926 0.019157064 0.014402962 5.55E-08 7.256003552 -0.099211723 S(ph)LGSVQAPSYGAR ddPTM_A459_MK2206_30min_R2 4 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.953)LGS(0.046)VQAPS(0.001)YGAR;S(1)LGSVQAPSYGAR;S(0.954)LGS(0.043)VQAPS(0.003)YGAR;S(0.997)LGS(0.003)VQAPSYGAR 191.63 0.00017289 1655130000 288627.5 329846 274450.7 287323.2 246190.9 295649.1 256559 190692.4 270871.7 264236.4 TRUE FALSE 310725.0433 313466.3273 283600.7494 263847.9755 236524.2083 306900.2337 222872.4951 215616.5514 294431.6308 255614.3879 1.215600757 1.226325051 1.109486644 1.032210971 0.92531649 1.200637555 0.871909038 0.84352275 1.151858599 1 17.96360952 -5.549199439 1.894288971 0.993237495 1.227913043 0.40797541 0.105285778 0.347190714 2.44457824 0.031552694 0.08213315 2.82E-06 5.549199439 0.234675548 S(ph)LHLSPQEQSASYQDR ddPTM_A459_MK2206_30min_R1 1 SLHLSPQEQSASYQDR 16 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 S(0.979)LHLS(0.02)PQEQS(0.001)ASYQDR 126.07 0.0011525 5017300 2244.2 1765 2138.9 1231.2 2199 2357.5 2405 1934 1565.1 1627 TRUE FALSE 2053.319005 1650.098179 1993.717427 1326.027237 2111.409174 2490.979613 2244.566838 1917.091242 1727.797746 1828.565043 1.122912752 0.902400593 1.090318025 0.725173678 1.154680924 1.362259233 1.227501776 1.048412934 0.944892692 1 10.83649623 S(ph)LIAQDHR ddPTM_A459_MK2206_30min_R1 1 SLIAQDHR 8 0 O15013-7;O15013-4;O15013-5;O15013-6;O15013;E9PB39;H0YAN8 O15013-7 ARHGEF10 Rho guanine nucleotide exchange factor 10 1 S(1)LIAQDHR 110.54 0.007925 5376100 1157.6 909.92 1061.1 968.15 1169.9 790.67 1148.2 1175.6 1204.6 1373.9 TRUE FALSE 1059.140041 850.6840426 989.0754884 1042.717081 1123.300406 835.4370521 1071.605673 1165.321853 1329.822481 1544.109104 0.68592306 0.550922237 0.64054767 0.675287179 0.727474764 0.541047941 0.693996085 0.754688804 0.861223133 1 10.59255898 -8.295310074 1.206225091 0.996760443 0.637223715 0.819560283 0.055366718 0.176761638 0.52190627 0.052617963 0.016931459 5.07E-09 8.295310074 -0.359536729 S(ph)LIAQDHR ddPTM_A459_MK2206_30min_R2 4 SLIAQDHR 8 0 O15013-7;O15013-4;O15013-5;O15013-6;O15013;E9PB39;H0YAN8 O15013-7 ARHGEF10 Rho guanine nucleotide exchange factor 10 1 S(1)LIAQDHR;S(1)LIAQDHR;S(1)LIAQDHR;S(1)LIAQDHR 102.53 0.010682 30037500 78153 85462 87927 87040 79513 81766 84109 68769 74084 104080 TRUE FALSE 84136.45377 81218.08135 90858.4423 79928.55357 76390.9201 84877.66243 73065.38727 77757.34442 80527.69241 100683.8781 0.835649712 0.806664213 0.902413018 0.793856525 0.758720478 0.843011453 0.72569103 0.772291909 0.799807217 1 16.61947317 S(ph)LIVEGK ddPTM_A459_MK2206_30min_R1 4 SLIVEGK 7 0 D6R9L5;H0Y8X0;A0A494C198;B4DFG0;H0Y993;P35659;A0A494C028 D6R9L5 DEK Protein DEK 1 S(1)LIVEGK;S(1)LIVEGK;S(1)LIVEGK;S(1)LIVEGK 120.31 0.0095171 47446900 24733.6 24592.3 23196.2 15702.6 19019.4 18706.4 26744.4 18586.3 29458.8 35047.8 TRUE FALSE 22629.87744 22991.3368 21621.70657 16912.01697 18261.81702 19765.5402 24960.32987 18423.80194 32521.14768 39389.78606 0.574511306 0.58368778 0.548916578 0.429350313 0.463618081 0.50179354 0.633675183 0.467730439 0.825623872 1 15.26553396 -8.4399529 3.316689663 0.99743569 0.525711939 0.872281795 0.060895058 0.075087213 1.60161756 0.062005177 0.016489708 3.63E-09 8.4399529 -0.471723751 S(ph)LIVEGK ddPTM_A459_MK2206_30min_R2 3 SLIVEGK 7 0 D6R9L5;H0Y8X0;A0A494C198;B4DFG0;H0Y993;P35659;A0A494C028 D6R9L5 DEK Protein DEK 1 S(1)LIVEGK;S(1)LIVEGK;S(1)LIVEGK 93.649 0.025432 68426800 292114 212472 250105 200349 174858 152983 230884 181513 118440 227192 TRUE FALSE 314478.4724 201920.9494 258443.3759 183979.8458 167992.1963 158804.8753 200568.6535 205237.3723 128741.6971 219778.7436 1.43088666 0.918746491 1.175925258 0.837113921 0.764369627 0.722567036 0.912593503 0.933836316 0.585778656 1 17.74569233 -1.522878745 0.645079125 0.817341628 49.83371886 0.580311481 0.146910629 152.065263 0.99986467 0.060610419 10632.27907 0.03 1.522878745 49.01637723 S(ph)LIYTDTLVR ddPTM_A459_MK2206_30min_R1 1 SLIYTDTLVR 10 0 Q5SYE7-2 Q5SYE7-2 NHSL1 NHS-like protein 1 1 S(0.985)LIY(0.001)T(0.012)DT(0.003)LVR 112.64 0.0081123 11060000 848.15 796.49 1037.1 862.53 882.19 825.69 920.45 675.77 665.72 975.96 TRUE FALSE 776.0103887 744.6383562 966.7045415 928.9622101 847.0505042 872.4398543 859.04846 669.8618141 734.9239763 1096.869293 0.70747754 0.678876108 0.881330663 0.846921521 0.772243794 0.7953909 0.783182158 0.610703407 0.670019647 1 10.0991759 S(ph)LIYTDTLVR ddPTM_A459_MK2206_30min_R2 2 SLIYTDTLVR 10 0 Q5SYE7-2 Q5SYE7-2 NHSL1 NHS-like protein 1 1 S(0.954)LIYT(0.044)DT(0.001)LVR;S(1)LIYTDTLVR 160.72 0.00043736 16735900 35087.6 42414 42008 54879 42917.1 39432 46703 35121 33097 42521 TRUE FALSE 37773.93363 40307.78244 43408.52575 50395.21015 41231.95901 40932.61239 40570.84 39711.43529 35975.71723 41133.54325 0.918324332 0.97992488 1.055307234 1.225160931 1.002392591 0.995115158 0.986320088 0.965427049 0.874607787 1 15.32802773 -7.256449003 1.529968691 0.942435123 1.042234872 0.188092182 0.079561451 0.700391097 3.200678889 0.049802954 0.029904893 5.54E-08 7.256449003 0.099799749 S(ph)LLAGLSLPSR ddPTM_A459_MK2206_30min_R2 2 SLLAGLSLPSR 11 0 Q8N201;H7C582 Q8N201 INTS1 Integrator complex subunit 1 1 S(1)LLAGLSLPSR;S(0.991)LLAGLS(0.009)LPSR 85.457 0.02305 9364300 4110.1 49339 21048 141347 80452 299930 0 45063 137435 9837.2 TRUE FALSE 4424.772416 46888.89701 21749.72981 129798.498 77293.05024 311344.0463 0 50952.88882 149388.8479 9516.21297 0.464971983 4.92726436 2.285544668 13.63972185 8.122248891 32.71722137 0 5.35432414 15.69835063 1 13.21617184 -1.79381897 19.76845047 8.85209026 4.882985548 0 9.596804531 0 0 2.202450321 0 0.016076112 1.79381897 -3.969104712 S(ph)LLDASEEAIK ddPTM_A459_MK2206_30min_R1 1 SLLDASEEAIK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 S(1)LLDASEEAIK 117.95 0.0054509 4235300 1422.6 1625.2 1735.6 1166.3 1737.3 1467.6 1616.1 1449.6 1688 1902.5 TRUE FALSE 1301.6004 1519.399185 1617.792308 1256.128628 1668.099662 1550.694244 1508.292918 1436.9263 1863.473641 2138.196063 0.608737628 0.710598626 0.756615511 0.58747121 0.780143454 0.725234823 0.705404403 0.672027381 0.87151673 1 11.06217843 -8.466565602 3.046233167 0.998589684 0.696761194 0.756917361 0.057104152 0.106798953 2.125033893 0.053412362 0.01427791 3.42E-09 8.466565602 -0.301828489 S(ph)LLDASEEAIKK ddPTM_A459_MK2206_30min_R1 5 SLLDASEEAIKK 12 1 P18206;P18206-2 P18206 VCL Vinculin 1 S(0.998)LLDAS(0.002)EEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK 166.6 0.00041792 265997800 17821 21754.94 20764.6 17581.44 16611.76 13593.8 20127.52 19872.64 23906.7 22279.55 TRUE FALSE 16305.23037 20338.68945 19355.15681 18935.56556 15950.07842 14363.46921 18784.84987 19698.8956 26391.88702 25039.70886 0.651174918 0.812257426 0.772978509 0.756221475 0.636991369 0.573627644 0.750202407 0.786706256 1.054001353 1 14.61193017 -8.138512821 2.99058757 1.030959898 0.709562293 0.765154857 0.069503429 0.138240446 2.210763524 0.063577559 0.020273587 7.27E-09 8.138512821 -0.321397605 S(ph)LLDASEEAIKK ddPTM_A459_MK2206_30min_R2 5 SLLDASEEAIKK 12 1 P18206;P18206-2 P18206 VCL Vinculin 1 S(1)LLDASEEAIKK;S(0.848)LLDAS(0.152)EEAIKK;S(0.962)LLDAS(0.038)EEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK 132.31 0.00097633 147889600 202442 210681 204922 176915 222587 144049 231903 176039 157661 230538 TRUE FALSE 217941.1152 200218.8879 211753.9972 162460.4786 213847.116 149530.8856 201453.8575 199047.9017 171374.0688 223015.5639 0.977246212 0.897779887 0.949503225 0.728471483 0.958888753 0.670495292 0.903317481 0.892529195 0.76843995 1 17.76678487 S(ph)LLGIDTEDAIQGR ddPTM_A459_MK2206_30min_R1 2 SLLGIDTEDAIQGR 14 0 P49454 P49454 CENPF Centromere protein F 1 S(1)LLGIDTEDAIQGR;S(1)LLGIDTEDAIQGR 233.28 1.27E-13 22763000 2118.82 2088.82 2112.7 1682.3 1815.99 1934.5 2282.04 1942.11 1658.78 2073.84 TRUE FALSE 1938.603233 1952.837438 1969.29581 1811.871037 1743.655273 2044.029718 2129.809275 1925.130337 1831.216117 2330.762956 0.8317462 0.837853302 0.844914669 0.777372505 0.748104936 0.876978808 0.913782017 0.825965735 0.785672396 1 11.18658657 -6.81612935 24.99865243 0.871684199 0.810006061 0.266010088 0.059259464 152.6139205 69758.1329 0.021154104 0.01865618 1.53E-07 6.81612935 -0.061678138 S(ph)LLGIDTEDAIQGR ddPTM_A459_MK2206_30min_R2 1 SLLGIDTEDAIQGR 14 0 P49454 P49454 CENPF Centromere protein F 1 S(1)LLGIDTEDAIQGR 196.18 0.00011976 6861700 8668.7 12863 15995 12297 16320 12012 15577 11691 11364 13965 TRUE FALSE 9332.382337 12224.24212 16528.26532 11292.29576 15679.1948 12469.12508 13531.72119 13219.05384 12352.42018 13509.32319 0.690810502 0.904874504 1.223471012 0.835889082 1.160620304 0.923001463 1.001657966 0.978513405 0.914362622 1 13.72166778 -4.851398543 3.92525708 1.003719706 0.682478037 0.433245826 0.108467834 0.194002746 5.001063103 0.025375545 0.151290127 1.41E-05 4.851398543 -0.321241669 S(ph)LLGLSNSEPNGSVETK ddPTM_A459_MK2206_30min_R1 1 SLLGLSNSEPNGSVETK 17 0 Q13033-2;Q13033;G3V340;G3V3G7 Q13033-2 STRN3 Striatin-3 1 S(1)LLGLSNSEPNGSVETK 220.78 5.72E-12 3360200 1248.5 1340.6 1147.4 1095 1090 931.94 1083.8 1102.9 1336.5 1461.7 TRUE FALSE 1142.308519 1253.326696 1069.517685 1179.33709 1046.582992 984.7056374 1011.50168 1093.257462 1475.433958 1642.786431 0.695348158 0.762927349 0.651038787 0.717888258 0.637077938 0.59941184 0.615723176 0.665489707 0.898128892 1 10.68192922 -8.380554262 3.152293404 0.995504939 0.666451254 0.858372797 0.046461295 0.090748958 1.63894751 0.049460555 0.013327834 4.16E-09 8.380554262 -0.329053686 S(ph)LLGLSNSEPNGSVETK ddPTM_A459_MK2206_30min_R2 1 SLLGLSNSEPNGSVETK 17 0 Q13033-2;Q13033;G3V340;G3V3G7 Q13033-2 STRN3 Striatin-3 1 S(1)LLGLSNSEPNGSVETK 251 1.36E-30 2969800 12423 11926 15255 12782 14588 10457 13098 11575 11585 13105 TRUE FALSE 13374.11443 11333.77218 15763.59409 11737.66971 14015.20182 10854.94846 11378.21687 13087.89224 12592.64236 12677.38492 1.054958457 0.894014992 1.243442096 0.92587468 1.105527828 0.85624508 0.897520816 1.032381072 0.993315454 1 13.62996956 -6.747339434 24.99907539 0.954268047 1.040821423 0.160564048 0.10136732 466.5387026 827167.6581 0.032819994 0.032669327 1.79E-07 6.747339434 0.086553375 S(ph)LLRPGQAAELR ddPTM_A459_MK2206_30min_R2 2 SLLRPGQAAELR 12 1 Q96BY6;Q96BY6-2;F8WB48;F8WE73 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 S(1)LLRPGQAAELR;S(1)LLRPGQAAELR 77.633 0.025012 21842800 53761 52947 39629.6 38711 27746.5 37178 33737 33410 37161 31826 TRUE FALSE 57876.9835 50317.72897 40950.83108 35548.18747 26657.033 38592.83484 29307.29137 37776.80171 40393.19661 30787.52023 1.879884546 1.634354719 1.330111382 1.154629772 0.865838911 1.25352203 0.951921141 1.227016708 1.311999028 1 14.91005805 -5.215127939 1.579448087 1.106344463 1.910979747 0.79509392 0.132910916 0.229453585 0.913774156 0.039522638 0.219849092 6.09E-06 5.215127939 0.804635284 S(ph)LNDDGSSDPR ddPTM_A459_MK2206_30min_R2 1 SLNDDGSSDPR 11 0 P54259 P54259 ATN1 Atrophin-1 1 S(0.818)LNDDGS(0.145)S(0.037)DPR 98.368 0.018317 12501000 35701 33086 32046 29537 29511 27641 33122 30768 26703 29741 TRUE FALSE 38434.29601 31442.99735 33114.39765 27123.73262 28352.24986 28692.89762 28773.04161 34789.48324 29025.57867 28770.55361 1.33589004 1.092888159 1.150982289 0.942760191 0.985460699 0.997300852 1.000086478 1.209204512 1.0088641 1 14.81230536 -4.003495861 1.125274973 1.031999503 2.493074991 0.589727706 0.075584667 5.945649465 1.745572954 0.023958009 15.69185728 9.92E-05 4.003495861 1.461075488 S(ph)LNEELGDEDSEK ddPTM_A459_MK2206_30min_R1 1 SLNEELGDEDSEK 13 0 O14924-5;O14924-4;O14924;O14924-7;O14924-6;O14924-2;O14924-3 O14924-5 RGS12 Regulator of G-protein signaling 12 1 S(1)LNEELGDEDSEK 84.753 0.02872 1900400 615.05 535.47 611.08 421.85 809.67 761.05 925.99 899.27 517.5 417.46 TRUE FALSE 562.7367677 500.6108057 569.6015922 454.3409601 777.4191294 804.1399933 864.2188967 891.4077772 571.2959769 469.1780965 1.199409717 1.066995261 1.214041313 0.968376323 1.656980868 1.713933364 1.841984746 1.899934767 1.217652702 1 8.873991853 -6.269410438 24.80295293 1.622365634 1.116250314 0.378976759 0.269585417 485.2874439 1510030.477 0.08023995 0.092621507 5.38E-07 6.269410438 -0.50611532 S(ph)LNLQAESVR ddPTM_A459_MK2206_30min_R1 2 SLNLQAESVR 10 0 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 S(1)LNLQAESVR;S(1)LNLQAESVR 143.56 0.0010764 15163100 911.59 704.45 1054.52 778.51 1288.53 1176.58 1453.89 1153.39 743.32 843.89 TRUE FALSE 834.0544836 658.590177 982.9421205 838.4709751 1237.205122 1243.196943 1356.903651 1143.306033 820.590774 948.4374642 0.8793985 0.694394941 1.036380529 0.884055098 1.304466734 1.310784305 1.430672767 1.205462749 0.865202826 1 9.889408842 -6.249889756 22.93090383 1.214834392 0.872390087 0.440836877 0.170607963 224.1137456 444958.8919 0.052473789 0.067025407 5.62E-07 6.249889756 -0.342444305 S(ph)LNLQAESVR ddPTM_A459_MK2206_30min_R2 2 SLNLQAESVR 10 0 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 S(1)LNLQAESVR;S(1)LNLQAESVR 157.33 0.0004938 7905500 30471.4 37070.3 33615.2 41082.7 34710.3 36919.2 38905.6 32545.5 32741 32998.6 TRUE FALSE 32804.31381 35229.44281 34735.91399 37726.11199 33347.39922 38324.18603 33797.24799 36799.3086 35588.753 31921.85838 1.027644237 1.103615033 1.088154504 1.181826933 1.044657201 1.200562497 1.058749387 1.152793429 1.114870963 1 14.96225702 -4.539015203 1.94792305 1.112915077 0.947601984 0.12266052 0.059163034 3.321800776 7.523140098 0.014357453 1.239250016 2.89E-05 4.539015203 -0.165313093 S(ph)LNPALDGLTCGLTSHDK ddPTM_A459_MK2206_30min_R2 2 SLNPALDGLTCGLTSHDK 18 0 A0A0A0MRE6;O94967-2;O94967;O94967-3;O94967-4 A0A0A0MRE6 WDR47 WD repeat-containing protein 47 1 S(1)LNPALDGLTCGLTSHDK;S(0.999)LNPALDGLT(0.001)CGLTSHDK 159.76 1.56E-05 0 23907 25478 28133 27192 25364 21297.7 25826 20072 18767.3 23376 TRUE FALSE 25737.3383 24212.79957 29070.94018 24970.32662 24368.08192 22108.1989 22435.01518 22695.47932 20399.64583 22613.24303 1.138153349 1.070735389 1.285571474 1.104234655 1.077602265 0.977666001 0.99211843 1.003636643 0.902110582 1 14.46488029 -6.51791962 1.91610686 0.973767637 1.156335662 0.671962982 0.05791042 0.205286385 1.518344867 0.021708885 0.02364195 3.03E-07 6.51791962 0.182568025 S(ph)LNPALDGLTCGLTSHDKR ddPTM_A459_MK2206_30min_R2 1 SLNPALDGLTCGLTSHDKR 19 1 A0A0A0MRE6;O94967-2;O94967;O94967-3;O94967-4 A0A0A0MRE6 WDR47 WD repeat-containing protein 47 1 S(1)LNPALDGLTCGLTSHDKR 62.589 0.02158 9793100 11970 20328 17471 18957 18562 15754 15209 10485 13933 12636 TRUE FALSE 12886.4324 19318.54108 18053.47442 17408.15246 17833.16261 16353.52951 13212.04003 11855.4255 15144.86715 12223.68835 1.054218009 1.580418325 1.476925286 1.424132549 1.458901937 1.337855567 1.080855438 0.969873017 1.238976871 1 13.57739205 -7.195403521 3.485054495 1.066573125 1.413409529 0.538391043 0.143948958 0.181943819 4.372761982 0.058028946 0.042507626 6.38E-08 7.195403521 0.346836404 S(ph)LPAEEGSSGK ddPTM_A459_MK2206_30min_R2 2 SLPAEEGSSGK 11 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 S(1)LPAEEGSSGK;S(0.999)LPAEEGS(0.001)SGK 114.87 0.0063424 42881000 113208 121077 121005 132687 110614 115300 144384 107856 97834 128198 TRUE FALSE 121875.2915 115064.4922 125039.2463 121846.0477 106270.7386 119687.8223 125426.2074 121953.1495 106343.4245 124014.9098 0.982747089 0.927827892 1.008259785 0.982511279 0.856919049 0.965108329 1.011380064 0.9833749 0.857505155 1 16.92015405 -3.922471811 0.001217365 1.076800843 0.836801962 0.000376394 0.055009763 23381148.54 3904.205367 381192.2417 388536.6673 0.000119544 3.922471811 -0.239998881 S(ph)LPAGDALYLSFNPPQPSR ddPTM_A459_MK2206_30min_R1 2 SLPAGDALYLSFNPPQPSR 19 0 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF0 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(1)LPAGDALYLSFNPPQPSR;S(1)LPAGDALYLSFNPPQPSR 324.45 1.89E-135 53523000 1814.95 2077.89 1639.01 1436.62 1775.21 1920.84 2195.6 1634.2 1580.48 1102.38 TRUE FALSE 1660.578972 1942.618983 1527.758568 1547.268721 1704.499627 2029.596301 2049.13553 1619.912362 1744.776552 1238.951157 1.34031028 1.567954453 1.233106373 1.248853688 1.375760148 1.638156831 1.653927613 1.307486863 1.408269036 1 10.2749036 -9.118912576 1.566684121 1.000090846 1.426408325 0.430805545 0.144682791 4.899188978 11.79803651 0.151128945 0.043195729 7.60E-10 9.118912576 0.426317479 S(ph)LPAGDALYLSFNPPQPSR ddPTM_A459_MK2206_30min_R2 2 SLPAGDALYLSFNPPQPSR 19 0 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF0 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(1)LPAGDALYLSFNPPQPSR;S(1)LPAGDALYLSFNPPQPSR 126.4 0.00036952 18814100 15603.4 21727.1 22669.8 25446.3 20173 26807.8 23530.8 13079.9 15027.5 21726.4 TRUE FALSE 16798.0083 20648.16381 23425.59982 23367.25589 19380.90666 27827.98961 20441.17769 14789.48784 16334.56479 21017.46935 0.79924029 0.982428639 1.114577565 1.111801593 0.922133219 1.324040928 0.97258035 0.703675956 0.777189895 1 14.35930135 -7.573293113 7.40302839 0.809627031 1.049384589 0.298217003 0.146772875 0.255674462 31.07969012 0.069447237 0.03996844 2.67E-08 7.573293113 0.239757559 S(ph)LPAPQDNDFLSR ddPTM_A459_MK2206_30min_R1 4 SLPAPQDNDFLSR 13 0 O43353-2;O43353 O43353-2 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 1 S(1)LPAPQDNDFLSR;S(1)LPAPQDNDFLSR;S(0.999)LPAPQDNDFLS(0.001)R;S(0.981)LPAPQDNDFLS(0.019)R 131.86 0.0014815 40772800 20572.2 19223.9 17294.7 16481.7 16943.5 16174.6 19265.4 16513.6 17394.3 17675.9 TRUE FALSE 18822.42636 17972.42062 16120.78395 17751.12339 16268.60452 17090.39187 17980.24032 16369.22334 19202.49973 19865.72394 0.947482529 0.904694975 0.811487364 0.893555324 0.81892835 0.860295448 0.905088603 0.823993296 0.966614647 1 14.27799375 -8.417325987 4.92613568 0.998784094 0.869972707 0.544468722 0.04165019 0.154191711 5.323829331 0.039887181 0.010393781 3.83E-09 8.417325987 -0.128811387 S(ph)LPAPQDNDFLSR ddPTM_A459_MK2206_30min_R2 4 SLPAPQDNDFLSR 13 0 O43353-2;O43353 O43353-2 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 1 S(1)LPAPQDNDFLSR;S(1)LPAPQDNDFLSR;S(1)LPAPQDNDFLSR;S(1)LPAPQDNDFLSR 142.57 0.00076849 28307100 26830.7 32822.6 31768.8 33729.2 36616 35393 36049 30237.8 31050.2 36388.6 TRUE FALSE 28884.87902 31192.67741 32827.95594 30973.41647 35178.27186 36739.90542 31315.723 34189.98428 33750.89027 35201.24296 0.820564179 0.886124318 0.932579454 0.879895534 0.999347435 1.043710458 0.889619808 0.971272075 0.958798253 1 15.10333875 -4.525406913 0.651115754 0.971843651 0.681237493 0.543220399 0.044086172 3.713554241 0.942640473 0.020787884 0.864735472 2.98E-05 4.525406913 -0.290606158 S(ph)LPATPQGK ddPTM_A459_MK2206_30min_R2 1 SLPATPQGK 9 0 Q13111;Q13111-3;Q13111-2;K7EPA1 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 S(0.643)LPAT(0.357)PQGK 98.04 0.020054 7597000 48309 44568 48610 50775 56501 48785 64711 57280 60327 68964 TRUE FALSE 52007.57418 42354.81793 50230.63314 46626.52008 54282.48685 50641.54736 56214.36797 64766.69267 65574.13341 66713.71033 0.77956351 0.634874267 0.75292819 0.698904616 0.813663137 0.759087557 0.84262092 0.970815329 0.9829184 1 16.02569566 -7.525561115 0.988150786 1.01362688 0.719370121 0.859885285 0.04443122 0.18321143 0.330427985 0.035227338 0.016520333 2.98E-08 7.525561115 -0.294256758 S(ph)LPEEDVAEIQHAEEFLIKPESK ddPTM_A459_MK2206_30min_R1 4 SLPEEDVAEIQHAEEFLIKPESK 23 1 O60832;H7C2Q9;H7C0M1;C9IYT0;O60832-2 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK 164.27 9.86E-11 115437000 12012.8 13727.6 14411.1 12715.4 11412.8 10823.7 12213 12120.8 9775.8 10002.5 TRUE FALSE 10991.04828 12833.93074 13432.91468 13694.74231 10958.20401 11436.52854 11398.29305 12014.82912 10792.02939 11241.68522 0.977704683 1.141637619 1.194920017 1.218210798 0.974783033 1.017332217 1.013930993 1.068774734 0.960001031 1 13.4565707 -6.274105673 24.97254544 1.010225195 1.138141216 0.474957948 0.065393076 697.8215624 1375804.062 0.020974519 0.023951158 5.32E-07 6.274105673 0.12791602 S(ph)LPEEDVAEIQHAEEFLIKPESK ddPTM_A459_MK2206_30min_R2 4 SLPEEDVAEIQHAEEFLIKPESK 23 1 O60832;H7C2Q9;H7C0M1;C9IYT0;O60832-2 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK 145.14 6.82E-08 35233000 147919 144430 130800 151160 145222 114732 171027 114798 114899 157566 TRUE FALSE 159243.7924 137257.8162 135160.8067 138809.7445 139519.8546 119098.2067 148570.9495 129802.4928 124892.7073 152424.6343 1.0447379 0.90049628 0.886738599 0.910677891 0.915336653 0.781357995 0.974717441 0.851584741 0.819373508 1 17.21773656 -4.759548274 4.442782057 0.887888469 1.058709028 0.346142825 0.062244838 0.227175273 9.667878714 0.0147386 0.125442056 1.74E-05 4.759548274 0.170820559 S(ph)LPELDR ddPTM_A459_MK2206_30min_R1 1 SLPELDR 7 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(1)LPELDR 92.838 0.026497 4514200 1664.4 1240.1 1141.2 657.71 1222 1252.4 1892.3 1098.2 1612.4 2147.3 TRUE FALSE 1522.83404 1159.369265 1063.738524 708.3669382 1173.325152 1323.309806 1766.06812 1088.598553 1780.01475 2413.323735 0.63101109 0.48040354 0.440777384 0.293523379 0.486186389 0.548334973 0.731799093 0.451078543 0.737578106 1 11.23680574 -8.8609662 0.517418014 1.021075216 0.462494914 0.662810047 0.110888948 0.958029069 0.520719044 0.159446952 0.059706464 1.38E-09 8.8609662 -0.558580303 S(ph)LPELDR ddPTM_A459_MK2206_30min_R2 2 SLPELDR 7 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(1)LPELDR;S(1)LPELDR 92.838 0.026497 11010300 33367 22937 22238.7 30016 21669.4 26689 29877 27021 26236 29052 TRUE FALSE 35921.60317 21797.98193 22980.12716 27563.59678 20818.55048 27704.6686 25954.11401 30552.73748 28517.95986 28104.03562 1.278165302 0.775617503 0.817680687 0.980770063 0.740767296 0.985789691 0.923501321 1.087129902 1.014728285 1 14.77848969 -7.711552256 9.203390617 1.038054129 0.915480208 0.096456064 0.143128849 0.654009865 113.8319755 0.06575715 0.037733194 1.94E-08 7.711552256 -0.122573921 S(ph)LPHLPGTPR ddPTM_A459_MK2206_30min_R2 2 SLPHLPGTPR 10 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 S(0.987)LPHLPGT(0.013)PR;S(0.987)LPHLPGT(0.013)PR 96.171 0.014541 4457200 19181.4 17904.9 15566.4 15519.6 12288.2 14258.5 16484.9 13971.7 10935.6 10945.2 TRUE FALSE 20649.94273 17015.7687 16085.37601 14251.59904 11805.70352 14801.11721 14320.41283 15797.84916 11886.75872 10588.05902 1.950304838 1.607071577 1.519199692 1.346006762 1.115001673 1.397906564 1.35250595 1.492043927 1.122657014 1 13.37015052 -1.522878751 0.548658667 1.260052339 32.45770228 0.709139061 0.141745186 76.15035945 0.700450421 0.070610024 2798.19515 0.03 1.522878751 31.19764994 S(ph)LPITIEMLK ddPTM_A459_MK2206_30min_R2 2 SLPITIEMLK 10 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 S(1)LPITIEMLK;S(1)LPITIEMLK 173.04 0.00012617 2946800 37430 29611.9 33626 33787 23882.5 26889.8 30592 23980 20660.7 36537 TRUE FALSE 40295.66958 28141.41611 34747.07406 31026.49402 22944.75305 27913.11018 26575.23365 27114.26834 22457.73034 35344.80068 1.140073471 0.796196769 0.983088697 0.877823426 0.649169117 0.789737377 0.751885232 0.767135981 0.635389927 1 15.10921039 -6.034040964 5.765667722 0.754454958 0.952446797 0.367423238 0.121493037 0.195621783 18.86745983 0.03339691 0.045013392 9.25E-07 6.034040964 0.197991839 S(ph)LPNLSR ddPTM_A459_MK2206_30min_R2 2 SLPNLSR 7 0 Q9P270;D6RIF6 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 S(1)LPNLSR;S(0.996)LPNLS(0.004)R 90.15 0.030027 19087400 42581 42905 37285 47392 54756 47119 45984 37344 42560 45557 TRUE FALSE 45841.0341 40774.40009 38528.06329 43519.922 52606.00431 48912.14656 39946.24556 42224.98902 46261.79187 44070.47882 1.04017554 0.925208919 0.874237456 0.987507356 1.193678982 1.109861927 0.906417326 0.958124126 1.049722924 1 15.42752495 -4.436695131 20.56235796 1.000279063 3.401211903 0.016531072 0.091721808 15107950.44 20990305.39 0.025370908 1679040363 3.66E-05 4.436695131 2.40093284 S(ph)LPSTSSTSSTK ddPTM_A459_MK2206_30min_R2 2 SLPSTSSTSSTK 12 0 A0A590UJA3;S4R3W2;A0A590UJU2;A0A590UK38;B1AKN5;A0A590UK09;B1AKN8;Q12857-2;Q12857-3;Q12857;Q12857-4;A0A590UK73;B1AKN7 A0A590UJA3 NFIA Nuclear factor 1;Nuclear factor 1 A-type 1 S(0.964)LPS(0.024)T(0.011)SST(0.001)SSTK;S(0.982)LPS(0.01)T(0.002)SS(0.004)T(0.001)SSTK 98.942 0.014821 3143100 22183 23920 18916.5 23026 20407 18121 24283 16867.2 17720.4 20501 TRUE FALSE 23881.34754 22732.16758 19547.16667 21144.70214 19605.71864 18810.60735 21094.61293 19071.80095 19261.68836 19832.05405 1.204179228 1.146233644 0.985635004 1.066188207 0.988587395 0.948495164 1.063662537 0.961665439 0.971240211 1 14.27554649 -5.139779263 2.931513458 0.998582911 1.200004874 0.782662672 0.037733327 0.119953673 1.903080104 0.010049312 0.037297247 7.25E-06 5.139779263 0.201421962 S(ph)LPTTVPES(ph)PNYR ddPTM_A459_MK2206_30min_R1 4 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 2 S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR 197.17 0.00189 259095500 12177.3 10644.9 11528.7 11091 14418.6 17959.8 21727.8 20827.9 19104.2 18063.1 TRUE FALSE 11141.55669 9951.915075 10746.16396 11945.23074 13844.27663 18976.66836 20278.37811 20645.80387 21090.14996 20300.8932 0.548821009 0.490220552 0.529344392 0.588409122 0.681954065 0.934770119 0.998890931 1.016989926 1.038877933 1 14.30925558 -6.662699827 1.532767717 1.023204097 0.522836574 0.990135509 0.021983952 0.033179213 0.161603413 0.009337789 0.00918861 2.17E-07 6.662699827 -0.500367523 S(ph)LPTTVPES(ph)PNYR ddPTM_A459_MK2206_30min_R2 5 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 2 S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR 215.37 1.32E-05 434538500 132403 167619 142604 172358 218619 262865 327982 277867 299005 323474 TRUE FALSE 142539.8755 159295.2842 147358.3462 158275.8001 210034.9196 272868.5118 284917.5694 314185.171 325011.9144 312919.0699 0.455516743 0.509062245 0.470915199 0.505804265 0.671211632 0.872009852 0.9105152 1.004046098 1.038645278 1 18.25543006 -6.714994855 1.201321683 1.008973164 0.468316558 0.986959438 0.026514908 0.047953039 0.146306269 0.0137335 0.012941891 1.93E-07 6.714994855 -0.540656606 down S(ph)LPTTVPESPNYR ddPTM_A459_MK2206_30min_R1 3 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 S(1)LPTTVPESPNYR;S(0.999)LPT(0.001)TVPESPNYR;S(1)LPTTVPESPNYR 251.91 4.88E-23 272679000 7733.34 8752.6 6949.15 6823 8122.1 7023.84 7318 6933.4 6165.7 5360.91 TRUE FALSE 7075.578824 8182.804149 6477.461059 7348.508642 7798.579558 7421.523751 6829.829572 6872.782015 6806.646579 6025.060004 1.174358234 1.358128242 1.075086564 1.219657337 1.294357161 1.231775907 1.133570382 1.140699348 1.129722621 1 12.55675989 -8.405799869 0.650261894 1.001932913 1.22886277 0.466980339 0.072475317 0.680202212 0.673747597 0.072572811 0.03096062 3.93E-09 8.405799869 0.226929857 S(ph)LPTTVPESPNYR ddPTM_A459_MK2206_30min_R2 2 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 S(1)LPTTVPESPNYR;S(0.997)LPT(0.002)T(0.001)VPESPNYR 198.37 0.0001526 72752000 25627.6 67314 44562 74933 70550 86915 61808 59945 68557 53807 TRUE FALSE 27589.66876 63971.28464 46047.67484 68810.7342 67779.85251 90222.61123 53692.53536 67780.01732 74519.96394 52051.282 0.530047824 1.229004977 0.884659764 1.321979624 1.302174508 1.733340809 1.031531469 1.302177674 1.431664333 1 15.66764608 -4.5234616 0.940605727 1.312006081 5.26E-11 0.446691131 0.233564464 2.966481867 1.502738054 0.076909933 4.455138288 3.00E-05 4.5234616 -1.312006081 S(ph)LPVSICR ddPTM_A459_MK2206_30min_R1 2 SLPVSICR 8 0 O94885;A0A087WW74 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 S(1)LPVSICR;S(1)LPVSICR 179.81 0.00037941 30486000 2580.3 2855.8 3016.8 2305.8 2957 2595.2 2855.3 2342.9 2303.6 2066.4 TRUE FALSE 2360.831935 2669.886901 2812.028021 2483.393116 2839.216428 2742.137981 2664.828147 2322.416272 2543.067464 2322.401233 1.016547831 1.149623443 1.21082782 1.069321304 1.222534844 1.18073395 1.1474452 1.000006476 1.095016411 1 11.18140153 -7.749914039 24.69362718 1.035633588 1.147082504 0.389626315 0.063282701 183.8592686 393930.0237 0.029754493 0.016989935 1.78E-08 7.749914039 0.111448916 S(ph)LPVSICR ddPTM_A459_MK2206_30min_R2 4 SLPVSICR 8 0 O94885;A0A087WW74 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 S(1)LPVSICR;S(1)LPVSICR;S(1)LPVSICR;S(1)LPVSICR 177.3 0.00021473 41966100 56158.9 64757 66262 67826 62908 67730 79232 56963.4 55669.3 55034 TRUE FALSE 60458.46856 61541.26155 68471.14201 62284.39884 60437.91583 70307.51261 68828.74323 64408.71196 60511.31509 53238.24509 1.135620989 1.15595962 1.286126954 1.169918331 1.135234937 1.320620402 1.292843953 1.209820344 1.136613632 1 15.7001754 -8.599315809 2.50698382 1.000535399 1.215808664 0.513603227 0.063695843 0.314473395 4.592346819 0.065305608 0.017678422 2.52E-09 8.599315809 0.215273265 S(ph)LPVSVPVWGFK ddPTM_A459_MK2206_30min_R1 1 SLPVSVPVWGFK 12 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 S(1)LPVSVPVWGFK 116.24 0.0049619 0 413.17 348.44 340.19 384.62 461.24 594.38 664.78 856.09 535.83 727.44 TRUE FALSE 378.0277219 325.7564927 317.0988506 414.243499 442.8678341 628.0332819 620.4337392 848.6052954 591.531446 817.5607591 0.462384866 0.398449276 0.387859675 0.506682218 0.541694093 0.768179337 0.758883951 1.037972146 0.723532092 1 9.675182142 -6.807624759 1.069930082 0.912142428 0.411663708 0.842289349 0.089065015 0.174535117 0.424337294 0.04653747 0.040230684 1.56E-07 6.807624759 -0.50047872 down S(ph)LPVSVPVWGFK ddPTM_A459_MK2206_30min_R2 2 SLPVSVPVWGFK 12 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 S(1)LPVSVPVWGFK;S(1)LPVSVPVWGFK 184.87 0.00010447 31146000 53336 79717 77863 110943 150185 169650 216826 186008 201061 224939 TRUE FALSE 57419.44517 75758.3697 80458.91356 101878.602 144287.9823 176106.1496 188356.4857 210319.8843 218548.9223 217599.2589 0.263877025 0.348155458 0.369757296 0.4681937 0.663090412 0.809314106 0.865611798 0.966546878 1.004364277 1 17.73131412 -6.48496772 0.739134936 1.008431651 0.262181846 0.994127402 0.0212012 0.048655001 0.059094732 0.014035834 0.018959406 3.27E-07 6.48496772 -0.746249805 down S(ph)LQEEHVAVAQLR ddPTM_A459_MK2206_30min_R1 2 SLQEEHVAVAQLR 13 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 S(1)LQEEHVAVAQLR;S(1)LQEEHVAVAQLR 103.67 0.0061791 7939200 4942.1 4505.2 4205.1 3887.1 4646.8 4557.8 4897.4 4034.2 4024.4 3878.4 TRUE FALSE 4521.748443 4211.910661 3919.669528 4186.485116 4461.708116 4815.858697 4570.703382 3998.929415 4442.750781 4358.885472 1.037363443 0.966281562 0.89923664 0.960448523 1.023589205 1.104837172 1.048594511 0.917420162 1.019240081 1 12.08974358 -6.259995661 23.60231881 1.020594764 0.96110776 0.188835087 0.053507833 102.9482245 1683007.386 0.017585017 0.02145345 5.50E-07 6.259995661 -0.059487004 S(ph)LQEEHVAVAQLR ddPTM_A459_MK2206_30min_R2 4 SLQEEHVAVAQLR 13 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 S(1)LQEEHVAVAQLR;S(1)LQEEHVAVAQLR;S(1)LQEEHVAVAQLR;S(1)LQEEHVAVAQLR 115.58 0.00263 30050300 58893 80228 77488 76403 72063 80881 91561 69863 98733 64538 TRUE FALSE 63401.89336 76243.99418 80071.41125 70160.6305 69233.44453 83958.98313 79538.93072 78994.33398 107320.6179 62432.13035 1.015533076 1.221230058 1.282535304 1.123790428 1.108939326 1.344804072 1.274006353 1.265283333 1.718996569 1 15.93000107 -6.769761139 24.88917965 1.334285078 1.160202241 0.185497965 0.176586388 298.4134297 892505.8468 0.059735115 0.053544062 1.70E-07 6.769761139 -0.174082837 S(ph)LQHQEQLEDSK ddPTM_A459_MK2206_30min_R1 1 SLQHQEQLEDSK 12 0 I3L419;I3L156;Q9BSJ6-2;Q9BSJ6;I3L427 I3L419 FAM64A Protein FAM64A 1 S(1)LQHQEQLEDSK 126.56 0.0026807 0 494.53 418.77 479.34 356.27 393.4 397.93 459.14 372.47 505.46 506.03 TRUE FALSE 452.4676266 391.5079969 446.8037363 383.7099771 377.730045 420.4604527 428.5116083 369.2135341 558.0043758 568.7208167 0.795588298 0.688401032 0.785629299 0.674689524 0.664174818 0.739309061 0.753465665 0.649199965 0.981156939 1 9.151576802 -8.271891393 24.78052228 0.990578562 0.71856808 0.837907586 0.047812996 247.4191384 586595.0197 0.042778367 0.011535271 5.35E-09 8.271891393 -0.272010483 S(ph)LQHQEQLEDSK ddPTM_A459_MK2206_30min_R2 1 SLQHQEQLEDSK 12 0 I3L419;I3L156;Q9BSJ6-2;Q9BSJ6;I3L427 I3L419 FAM64A Protein FAM64A 1 S(1)LQHQEQLEDSK 147.7 0.00062273 4597400 14048 10209 11782 12030 7844.9 7972 13550 10376 6727.3 11089 TRUE FALSE 15123.52568 9702.035905 12174.806 11047.11052 7536.869809 8275.380046 11770.86872 11732.17883 7312.428394 10727.16684 1.409834107 0.904436004 1.134950745 1.029825553 0.702596494 0.771441348 1.097295204 1.093688483 0.681673782 1 13.38898147 -2.387063839 1.232358439 0.926394897 199.9999911 0.426355529 0.161277546 660.8714104 3.134470453 0.049095682 369539.407 0.004101438 2.387063839 199.0735962 S(ph)LQLMDNR ddPTM_A459_MK2206_30min_R1 4 SLQLMDNR 8 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR 122.55 0.0063495 160996000 10671.4 11102.8 10409.3 9511.1 11705.9 10648.8 11348.3 10671 9113.5 9139.1 TRUE FALSE 9763.741392 10380.0057 9702.745718 10243.64657 11239.62922 11251.72585 10591.27561 10577.70457 10060.88094 10271.3207 0.950582858 1.010581404 0.944644413 0.997305689 1.094273029 1.095450739 1.031150318 1.029829063 0.979511908 1 13.32633408 -6.010952319 23.92740269 1.042666097 0.972496449 0.408846643 0.037765261 304.7494683 665787.3682 0.011437614 0.015755956 9.75E-07 6.010952319 -0.070169648 S(ph)LQLMDNR ddPTM_A459_MK2206_30min_R2 6 SLQLMDNR 8 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR 100.93 0.017443 156428100 99135.8 135163.1 129281.6 150383.6 138514.6 139080.4 137680.5 97231.6 117987 101796.3 TRUE FALSE 106725.7131 128451.097 133591.784 138096.7788 133075.8208 144373.2021 119602.885 109940.104 128249.296 98474.69507 1.083788206 1.304407157 1.356610284 1.402358024 1.351370733 1.466094431 1.214554509 1.116430002 1.302357889 1 16.58746542 -8.672669574 0.719160446 1.007855276 1.323338036 0.376578264 0.113191738 0.963266698 1.074196555 0.118182227 0.044528111 2.12E-09 8.672669574 0.31548276 S(ph)LQLPASPAPDPSPR ddPTM_A459_MK2206_30min_R1 2 SLQLPASPAPDPSPR 15 0 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)LQLPASPAPDPSPR;S(1)LQLPASPAPDPSPR 242.9 2.37E-20 35967000 3469.7 4373.5 3919.5 3423.8 3426.1 3368.4 4136.2 2991.5 3516 3770.9 TRUE FALSE 3174.583795 4088.784355 3653.45526 3687.501669 3289.631182 3559.115897 3860.281645 2965.345631 3881.500782 4238.067561 0.749063989 0.964775643 0.862056871 0.870090346 0.776210179 0.839796876 0.910858921 0.699692864 0.915865716 1 12.04919087 -8.524520082 24.87255687 1.00000001 0.839280764 0.340656187 0.073445484 167.942472 2544988.318 0.068219178 0.017614116 2.99E-09 8.524520082 -0.160719245 S(ph)LQLPASPAPDPSPR ddPTM_A459_MK2206_30min_R2 4 SLQLPASPAPDPSPR 15 0 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)LQLPASPAPDPSPR;S(1)LQLPASPAPDPSPR;S(1)LQLPASPAPDPSPR;S(1)LQLPASPAPDPSPR 184.21 2.11E-05 75606000 88349 81129 80312 98182 67330 77249 93653 64114 64867 76003 TRUE FALSE 95113.06737 77100.25183 82989.562 90160.21653 64686.28589 80188.76483 81356.2486 72493.91994 70509.01441 73523.02833 1.293650024 1.048654463 1.128756036 1.226285404 0.879809869 1.090661887 1.106541045 0.986002911 0.959005852 1 16.16590857 -1.522878745 0.29836964 0.991361686 3.035464131 0.409320017 0.09110709 59.64720425 0.849559702 0.09451654 64.95427666 0.03 1.522878745 2.044102446 S(ph)LQLPASPAPDPSPRPAYK ddPTM_A459_MK2206_30min_R1 2 SLQLPASPAPDPSPRPAYK 19 1 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(0.702)LQLPAS(0.241)PAPDPS(0.046)PRPAY(0.011)K;S(0.94)LQLPAS(0.059)PAPDPS(0.001)PRPAYK 65.428 0.013202 46234000 11311.4 12942.6 12241.1 12887.9 13982.7 10664.9 10812.7 11296 7809.5 7085.6 TRUE FALSE 10349.30603 12100.03439 11410.20824 13880.52829 13425.73945 11268.73742 10091.40451 11197.24026 8621.325472 7963.417622 1.299606089 1.519452447 1.432828062 1.743036589 1.685926833 1.415062974 1.267220306 1.406084774 1.082616269 1 12.959172 -8.046348421 0.92741917 1.000298691 1.529890207 0.63612613 0.135057249 0.371142174 0.614977691 0.134240252 0.050608478 8.99E-09 8.046348421 0.529591516 S(ph)LQLPASPAPDPSPRPAYK ddPTM_A459_MK2206_30min_R2 4 SLQLPASPAPDPSPRPAYK 19 1 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)LQLPASPAPDPSPRPAYK;S(1)LQLPASPAPDPSPRPAYK;S(1)LQLPASPAPDPSPRPAYK;S(0.998)LQLPAS(0.002)PAPDPSPRPAYK 135.31 0.0001052 30647300 75664 157011 128551 137319 140875 136755 121549 80277 133138 92318 TRUE FALSE 81456.89402 149214.0621 132836.8262 126099.5984 135343.5397 141959.3074 105589.4703 90769.47953 144718.1026 89305.67122 0.91211334 1.670824036 1.487439984 1.411999896 1.515508901 1.589588941 1.182337794 1.016390989 1.620480543 1 16.44646417 -7.280714127 24.10454787 1.206168202 1.447645371 0.164914883 0.247982715 913.7031797 1142649.277 0.099298799 0.067078732 5.24E-08 7.280714127 0.241477169 S(ph)LQPLAPR ddPTM_A459_MK2206_30min_R2 1 SLQPLAPR 8 0 Q14764 Q14764 MVP Major vault protein 1 S(1)LQPLAPR 89.171 0.03123 0 13291 19377 18346 21034 21283 28080 15010 11047 19694 14440 TRUE FALSE 14308.56918 18414.76636 18957.64648 19315.45492 20447.32248 29148.60408 13039.16897 12490.88083 21406.94852 13968.82398 1.024321675 1.318276068 1.357139764 1.38275455 1.463782671 2.086689911 0.933447868 0.894197024 1.532480368 1 13.76992295 S(ph)LQQLAEER ddPTM_A459_MK2206_30min_R1 2 SLQQLAEER 9 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 1 S(1)LQQLAEER;S(1)LQQLAEER 127.71 0.0044975 14473600 1595.41 1293.73 1057.12 1122.78 1492.55 1080.26 1221.95 920.04 1200.27 1368.03 TRUE FALSE 1459.712002 1209.507942 985.3656397 1209.25671 1433.098573 1141.423388 1140.435945 911.9961873 1325.042362 1537.511884 0.949398841 0.786665751 0.640883267 0.78650235 0.932089428 0.742383457 0.741741223 0.593163667 0.861809509 1 10.58638185 -4.769258332 5.442481629 0.770971268 0.957340245 0.135440564 0.11711309 0.260564649 23.81023506 0.02856953 0.181145145 1.70E-05 4.769258332 0.186368977 S(ph)LQQLAEER ddPTM_A459_MK2206_30min_R2 3 SLQQLAEER 9 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 1 S(1)LQQLAEER;S(1)LQQLAEER;S(1)LQQLAEER 117.7 0.0074474 26106100 17499.7 17264.6 18367.8 21011.5 16648.8 18853.9 13885.6 12526.3 8550.4 14993.2 TRUE FALSE 18839.49049 16407.26507 18980.17328 19294.79324 15995.08446 19571.39838 12062.40404 14163.53042 9294.098336 14503.97311 1.298919292 1.131225557 1.308618896 1.33031088 1.102807095 1.349381871 0.831662052 0.976527625 0.640796716 1 13.82416054 -7.268138263 24.9838256 0.860290542 1.247125148 0.723797921 0.118375581 275.3820377 1027046.669 0.046019643 0.03182691 5.39E-08 7.268138263 0.386834606 S(ph)LQTLPTDSSTFDTDTFCPPRPK ddPTM_A459_MK2206_30min_R1 2 SLQTLPTDSSTFDTDTFCPPRPK 23 1 B0QY95;Q9NQG6 B0QY95 MIEF1 Mitochondrial dynamics protein MID51 1 S(1)LQTLPTDSSTFDTDTFCPPRPK;S(0.901)LQT(0.093)LPT(0.006)DSSTFDTDTFCPPRPK 171.63 8.54E-13 31999000 4344.9 3775.3 3711.5 2920.2 3935.5 3659.7 3966.3 3004.5 3992.3 4487.2 TRUE FALSE 3975.343439 3529.527284 3459.573721 3145.11431 3778.740701 3866.909051 3701.715364 2978.231973 4407.313872 5043.108213 0.788272484 0.699871416 0.686000295 0.623646009 0.749288047 0.766770985 0.734014661 0.590554842 0.873928079 1 12.30009747 -8.498335124 5.337571105 0.999672029 0.706444566 0.735392481 0.05816179 0.07593809 6.887632675 0.056788588 0.014751736 3.17E-09 8.498335124 -0.293227463 S(ph)LQTLPTDSSTFDTDTFCPPRPK ddPTM_A459_MK2206_30min_R2 2 SLQTLPTDSSTFDTDTFCPPRPK 23 1 B0QY95;Q9NQG6 B0QY95 MIEF1 Mitochondrial dynamics protein MID51 1 S(0.878)LQT(0.113)LPT(0.007)DS(0.001)STFDTDTFCPPRPK;S(0.999)LQT(0.001)LPTDSSTFDTDTFCPPRPK 147.87 6.40E-08 15975400 75725 61260 70785 66320 63581 55110 82968 59395 47497 75217 TRUE FALSE 81522.56422 58217.91748 73144.93657 60901.44385 61084.49047 57207.24967 72074.20194 67158.13043 51628.20321 72762.67545 1.120389866 0.800106883 1.005253533 0.836987418 0.839503084 0.786216962 0.990538095 0.922975001 0.709542398 1 16.15091097 -4.750090954 24.90577369 0.876713884 1.120390425 0.367831941 0.095804717 524.1151757 1150170.359 0.022906277 0.349564468 1.78E-05 4.750090954 0.243676541 S(ph)LQTLPTDSSTFDTDTFCPPRPKPVAR ddPTM_A459_MK2206_30min_R1 1 SLQTLPTDSSTFDTDTFCPPRPKPVAR 27 2 B0QY95;Q9NQG6 B0QY95 MIEF1 Mitochondrial dynamics protein MID51 1 S(0.447)LQT(0.176)LPT(0.359)DS(0.014)S(0.003)T(0.001)FDTDTFCPPRPKPVAR 58.776 0.0024839 16106000 3226.6 2377.3 2550.7 2253.9 2747.6 2022.3 2501.6 3059.1 2033.1 1727.8 TRUE FALSE 2952.160726 2222.537338 2377.565591 2427.495769 2638.157274 2136.800878 2334.722828 3032.354611 2244.448021 1941.852908 1.520280302 1.14454464 1.224379859 1.250092506 1.358577296 1.100392759 1.202317034 1.561577913 1.15582803 1 10.92321821 -8.526365326 24.45101537 0.999999976 1.283881155 0.299262462 0.142477015 350.6203466 2458871.259 0.134580827 0.03474862 2.98E-09 8.526365326 0.283881179 S(ph)LSAMDVEK ddPTM_A459_MK2206_30min_R1 1 SLSAMDVEK 9 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 S(0.994)LS(0.006)AMDVEK 145.28 0.0018689 14075000 1791 1968.3 2380.1 2179.2 2548.9 2324.4 2747 2792.3 2993.3 3518.9 TRUE FALSE 1638.666045 1840.163312 2218.545443 2347.042362 2447.371916 2456.005519 2563.752642 2767.887215 3304.464247 3954.847898 0.414343633 0.465293068 0.560968589 0.593459577 0.618828329 0.621011372 0.648255687 0.699871977 0.835547746 1 11.9494065 -7.490435924 0.107209437 1.371754151 4.24E-14 0.958303843 0.033040984 2.200639052 0.184754293 0.97229387 1.207769216 3.23E-08 7.490435924 -1.371754151 down S(ph)LSAMDVEK ddPTM_A459_MK2206_30min_R2 1 SLSAMDVEK 9 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 S(0.989)LS(0.011)AMDVEK 127.87 0.0044607 9743400 32109 36151 35467 32109 44694 39129 51854 44210 37119 49470 TRUE FALSE 34567.28973 34355.79391 36649.45208 29485.59199 42939.08899 40618.08151 45045.50751 49988.3988 40347.54352 47855.79795 0.722321875 0.717902436 0.765830968 0.616134162 0.897259911 0.848759884 0.941275863 1.044563061 0.843106692 1 15.5464061 -6.602372185 1.675354563 0.952593862 0.711644345 0.697975575 0.070687291 0.200108892 1.15219749 0.027349306 0.028176006 2.50E-07 6.602372185 -0.240949517 S(ph)LSAPLHPEFEEVYR ddPTM_A459_MK2206_30min_R2 2 SLSAPLHPEFEEVYR 15 0 Q53HC0-2;Q53HC0 Q53HC0-2 CCDC92 Coiled-coil domain-containing protein 92 1 S(0.556)LS(0.444)APLHPEFEEVYR;S(0.606)LS(0.394)APLHPEFEEVYR 82.449 0.016777 4609800 25493.9 31759 31396 37954 24985.4 27512.4 32108 22284.8 23494.3 27863 TRUE FALSE 27445.73259 30181.89424 32442.72697 34853.03679 24004.34765 28559.40366 27892.18103 25197.49988 25537.79175 26953.83259 1.018249724 1.119762621 1.20364059 1.29306423 0.890572707 1.05956745 1.034813173 0.934839221 0.947464212 1 14.71820281 -6.270018833 24.99984835 0.981549508 1.159111053 0.557522695 0.078867766 515.7787469 1502936.476 0.02571223 0.029610252 5.37E-07 6.270018833 0.177561545 S(ph)LSDSESDDSK ddPTM_A459_MK2206_30min_R1 3 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 S(0.369)LS(0.058)DS(0.369)ES(0.201)DDS(0.003)K;S(0.88)LS(0.117)DS(0.003)ESDDSK;S(0.977)LS(0.016)DS(0.007)ESDDSK 273.24 4.62E-31 227283000 14368.8 15078.4 14036 11781 9522 8419 11264.1 10341.5 8648.3 13434.1 TRUE FALSE 13146.65811 14096.79342 13083.27543 12688.37466 9142.718577 8895.676504 10512.69244 10251.08536 9547.321733 15098.41773 0.87073085 0.933660313 0.866532882 0.840377773 0.605541504 0.589179387 0.696277758 0.678950969 0.632339223 1 13.88210975 -6.106251852 4.591821752 0.679180405 0.889308945 0.378452954 0.110514991 0.205667662 7.007085685 0.031222978 0.041305455 7.83E-07 6.106251852 0.21012854 S(ph)LSDSESDDSK ddPTM_A459_MK2206_30min_R2 5 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 S(1)LSDSESDDSK;S(0.991)LS(0.009)DSESDDSK;S(0.99)LS(0.01)DSESDDSK;S(0.706)LS(0.191)DS(0.102)ESDDSK;S(0.521)LS(0.313)DS(0.152)ES(0.015)DDSK 218.94 1.48E-05 1743840000 539082 497117 520169 484329 463658 334132 525042 382673 345776 512206 TRUE FALSE 580354.5324 472430.8927 537511.1748 444757.7714 445452.4572 346847.6274 456103.3547 432689.675 375850.9715 495492.7602 1.171267431 0.953456701 1.084801269 0.897607003 0.899009013 0.70000544 0.920504579 0.873251256 0.758539784 1 18.91850445 -5.891406697 2.393099296 0.847382073 1.062940086 0.500827551 0.093481977 0.23580638 2.74283038 0.027297568 0.04544061 1.28E-06 5.891406697 0.215558013 S(ph)LSESSVIMDR ddPTM_A459_MK2206_30min_R1 1 SLSESSVIMDR 11 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BNX5 H3BSS6 ZNF106 Zinc finger protein 106 1 S(0.811)LS(0.189)ESSVIMDR 128.88 0.0026917 25927000 3883.5 3139.8 3786.4 3425 3870.1 3544.3 3381.7 3619.8 2869 2946.4 TRUE FALSE 3553.187932 2935.398449 3529.389718 3688.794093 3715.945722 3744.975203 3156.112963 3588.15247 3167.242817 3311.422276 1.073009612 0.886446428 1.065822907 1.113960645 1.12216003 1.130926499 0.95309891 1.08356838 0.95645996 1 11.69323528 -10.65270766 11.84746423 1.000031756 1.044480703 0.025477368 0.078869999 0 0 0.078634607 0.019071694 2.22E-11 10.65270766 0.044448948 S(ph)LSGSPLK ddPTM_A459_MK2206_30min_R2 3 SLSGSPLK 8 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 S(0.976)LS(0.02)GS(0.004)PLK;S(0.751)LS(0.155)GS(0.093)PLK;S(0.499)LS(0.147)GS(0.354)PLK 113.66 0.010653 202348000 335272 335089 297919 310993 254382 259566 460660 298717 254665 290675 TRUE FALSE 360940.6821 318448.9675 307851.4708 285583.8771 244393.6845 269443.966 400174.7886 337760.3375 276815.3014 281190.2986 1.283617123 1.132503394 1.094815406 1.015624929 0.869139817 0.958226395 1.423145787 1.201180621 0.984441152 1 18.10118729 -1.522878745 0.008417237 2.15E-12 2.317189258 0.041063935 0.155817963 118407.3682 77.40006717 9403.05929 12057.01865 0.03 1.522878745 2.317189258 S(ph)LSGSSPCPK ddPTM_A459_MK2206_30min_R1 3 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.997)LS(0.001)GS(0.002)SPCPK;S(0.972)LS(0.004)GS(0.022)S(0.001)PCPK;S(0.985)LS(0.01)GS(0.001)S(0.003)PCPK 134.2 0.0021426 96238000 5510 5920.6 6001.9 4901.8 5755.5 5479.8 5428.4 5133.1 4943 4707.1 TRUE FALSE 5041.345566 5535.167864 5594.50775 5279.337485 5526.246248 5790.06154 5066.281341 5088.221848 5456.842539 5290.251085 0.95295015 1.04629587 1.057512708 0.997937036 1.044609445 1.094477643 0.957663684 0.961811031 1.031490274 1 12.36912048 -10.33825997 3.98301128 0.999999686 1.017486792 0.010373525 0.045295838 32438692.28 43796335.79 139.1875839 0.011688964 4.59E-11 10.33825997 0.017487106 S(ph)LSGSSPCPK ddPTM_A459_MK2206_30min_R2 1 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.496)LS(0.461)GS(0.005)S(0.039)PCPK 99.215 0.018731 72971000 45190 47395 46771 60010 52712 37022 46180 40291 49350 48528 TRUE FALSE 48649.78115 45041.43322 48330.3218 55106.99104 50642.26202 38430.89815 40116.51053 45557.17204 53642.3738 46944.53533 1.036324693 0.959460625 1.029519654 1.173874459 1.07876799 0.818644766 0.854551232 0.970446756 1.142675573 1 15.51866961 S(ph)LSGTPK ddPTM_A459_MK2206_30min_R2 1 SLSGTPK 7 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03 H3BLZ3 WWC1 Protein KIBRA 1 S(1)LSGTPK 92.062 0.027516 32527000 123760 144380 138510 104970 121530 96069 132720 93689 91496 132230 TRUE FALSE 133235.1608 137210.2991 143127.8543 96393.61522 116758.1216 99724.97311 115293.7046 105934.474 99454.15669 127915.3459 1.041588558 1.07266488 1.118926375 0.753573502 0.912776498 0.77961696 0.901328169 0.82816079 0.777499806 1 16.96482983 -5.753877587 24.99995035 0.84503123 1.077220481 0.67437133 0.072313599 90.62694195 299617.2645 0.018292173 0.030916393 1.76E-06 5.753877587 0.232189251 S(ph)LSIEIGHEVK ddPTM_A459_MK2206_30min_R1 1 SLSIEIGHEVK 11 0 A0A3B3IU16;C9JTT8;Q68DU7;H7C1N3;O15155-2;O15155 A0A3B3IU16 BET1;DKFZp781C0425 BET1 homolog 1 S(0.844)LS(0.156)IEIGHEVK 99.991 0.011052 6478600 6601.4 3828 3224.7 3041.9 3708.9 2833.1 3824.4 3881.4 4183.4 3511.9 TRUE FALSE 6039.916265 3578.796504 3005.816349 3276.187665 3561.166659 2993.507674 3569.281254 3847.465329 4618.2794 3946.980685 1.530262432 0.906717511 0.761548279 0.830049075 0.902250845 0.758429775 0.904306744 0.974786966 1.170079047 1 11.94653374 -4.761642886 8.085370103 0.898149085 1.537673695 0.720099656 0.115355025 0.049863761 29.98917982 0.030098077 0.174979412 1.73E-05 4.761642886 0.639524609 S(ph)LSIEIGHEVK ddPTM_A459_MK2206_30min_R2 1 SLSIEIGHEVK 11 0 A0A3B3IU16;C9JTT8;Q68DU7;H7C1N3;O15155-2;O15155 A0A3B3IU16 BET1;DKFZp781C0425 BET1 homolog 1 S(0.771)LS(0.229)IEIGHEVK 81.185 0.028024 2521900 61253 27489 29904 24132 20635 24343 45579 23048 20329 29126 TRUE FALSE 65942.57678 26123.93623 30900.98443 22160.33841 19824.76622 25269.38992 39594.42255 26060.45274 22097.17967 28175.62101 2.340412542 0.92718227 1.096727715 0.786507541 0.703614171 0.896852989 1.4052724 0.924929134 0.784265932 1 14.78215979 -4.760877045 24.99827091 0.949686176 2.340414127 0.833007948 0.18712691 5.539120581 246024.5634 0.049488465 0.285125072 1.73E-05 4.760877045 1.390727951 S(ph)LSLESTDR ddPTM_A459_MK2206_30min_R1 1 SLSLESTDR 9 0 H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-2;Q5VT25-6 H0Y7V8 CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha 1 S(0.98)LS(0.02)LESTDR 106.62 0.013063 5670300 1430.1 1417 1224.6 1207.6 1007 1226.6 1487.1 1171.2 1264.7 1211.7 TRUE FALSE 1308.462485 1324.753042 1141.477564 1300.609561 966.8890576 1296.049032 1387.898272 1160.960322 1396.170091 1361.814544 0.960822816 0.972785207 0.838203388 0.955056301 0.710000537 0.951707439 1.019153657 0.852509857 1.025227772 1 10.41131453 -6.972861013 24.99994538 0.965289113 0.886917905 0.19228274 0.084598385 403.2832252 371496.1132 0.029703535 0.026195459 1.06E-07 6.972861013 -0.078371208 S(ph)LSLESTDR ddPTM_A459_MK2206_30min_R2 1 SLSLESTDR 9 0 H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-2;Q5VT25-6 H0Y7V8 CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha 1 S(0.998)LS(0.002)LESTDR 80.102 0.04726 8011500 78267 71512 79553 78242 78021 53340 96209 67062 66803 94950 TRUE FALSE 84259.1817 67960.81807 82205.25731 71849.37832 74957.50352 55369.89108 83576.64273 75827.23366 72613.40419 91851.78928 0.91733849 0.739896507 0.894977201 0.782231668 0.816070151 0.602817773 0.909907617 0.825538993 0.790549697 1 16.4870202 -10.93627082 0.76652321 1.069040685 0.805560579 0.295534682 0.088378511 163.0693991 34.51528486 23.084234 0.029420859 1.16E-11 10.93627082 -0.263480106 S(ph)LSMVDLQDAR ddPTM_A459_MK2206_30min_R1 2 SLSMVDLQDAR 11 0 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 S(0.949)LS(0.051)MVDLQDAR;S(0.627)LS(0.373)MVDLQDAR 170 0.00038847 16740100 5126.6 5517 4822 4198.6 5745.9 5209.8 5146.7 4874.8 5041.6 4051.1 TRUE FALSE 4690.555749 5157.842297 4494.696075 4521.976899 5517.028636 5504.774374 4803.373034 4832.180138 5565.692362 4552.980852 1.030216445 1.132849547 0.987198545 0.993190406 1.211739916 1.209048435 1.05499522 1.061322306 1.222428238 1 12.15259568 -6.247111958 24.94250181 1.130198419 1.039315211 0.239294516 0.078992949 1222.857173 2128861.666 0.023773968 0.03053894 5.66E-07 6.247111958 -0.090883208 S(ph)LSPFR ddPTM_A459_MK2206_30min_R2 1 SLSPFR 6 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;H0YMW2;A0A087WY36;H0YLH1 Q12802-4;REV__F8W0Q0 AKAP13 A-kinase anchor protein 13 1 S(0.973)LS(0.027)PFR 99.375 0.033329 17879000 12145 12246 15202 19637 15521 19381 15899 12070 16463 11739 TRUE FALSE 13074.83054 11637.88145 15708.82709 18032.59428 14911.56755 20118.55754 13811.4422 13647.59044 17894.92198 11355.95739 1.15136312 1.024826093 1.383311556 1.587941348 1.313105275 1.771630242 1.21622878 1.201800075 1.575817993 1 13.47116172 -5.272515921 20.84109851 1.40143629 1.088094676 0.228301497 0.212997866 90.10837707 169548.2225 0.053749505 0.114398227 5.34E-06 5.272515921 -0.313341614 S(ph)LSPGAASSSSGDGDGK ddPTM_A459_MK2206_30min_R2 1 SLSPGAASSSSGDGDGK 17 0 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 S(0.905)LS(0.095)PGAASSSSGDGDGK 114.06 0.0022152 0 13350 12714 15534 12467 13914 8471.7 16909 12206 12161 17936 TRUE FALSE 14372.08626 12082.64125 16051.89581 11448.40622 13367.66645 8794.09648 14688.82799 13801.36611 13218.7418 17350.74979 0.828326524 0.696375741 0.925141334 0.659821988 0.770437394 0.506842447 0.846581742 0.795433412 0.761854211 1 14.08271039 -9.305178627 0.888449505 1.0022939 0.745494645 0.315971403 0.108762624 4.456426712 4.093254027 0.133289029 0.034590512 4.95E-10 9.305178627 -0.256799255 S(ph)LSPGGAALGYR ddPTM_A459_MK2206_30min_R1 3 SLSPGGAALGYR 12 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 S(0.862)LS(0.138)PGGAALGYR;S(0.664)LS(0.336)PGGAALGYR;S(0.874)LS(0.126)PGGAALGYR 215.77 2.16E-07 591630000 7862.8 8657.7 8113.6 6907.8 9121.3 8234 9024.3 7618.6 7840.5 6180.9 TRUE FALSE 7194.027571 8094.082156 7562.871438 7439.839953 8757.979306 8700.201964 8422.305413 7551.991383 8655.548033 6946.636555 1.035613064 1.165180025 1.088709821 1.070998877 1.260751046 1.252433735 1.212429259 1.087143587 1.246005598 1 12.7620989 -4.759999424 24.57796831 1.16010695 1.035612886 0.143478327 0.085317698 57.4767427 980612.2369 0.021275202 0.129030031 1.74E-05 4.759999424 -0.124494064 S(ph)LSPGGAALGYR ddPTM_A459_MK2206_30min_R2 5 SLSPGGAALGYR 12 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 S(0.605)LS(0.395)PGGAALGYR;S(0.941)LS(0.059)PGGAALGYR;S(0.999)LS(0.001)PGGAALGYR;S(0.999)LS(0.001)PGGAALGYR;S(0.999)LS(0.001)PGGAALGYR 193.62 0.0001042 844441000 260145 341469 310328 358226 329396 352682 347723 251773 290516 278214 TRUE FALSE 280061.9012 324512.146 320674.1806 328957.7899 316462.258 366103.5606 302066.5524 284680.5956 315784.5565 269135.9 1.040596595 1.205755702 1.191495377 1.222273914 1.175845578 1.360292554 1.122356967 1.057757793 1.173327514 1 18.03797532 -8.44800631 0.879603846 1.011696419 1.194437618 0.282963474 0.084246767 0.766138904 1.319608215 0.081568057 0.029021786 3.56E-09 8.44800631 0.182741199 S(ph)LSPGVSR ddPTM_A459_MK2206_30min_R2 1 SLSPGVSR 8 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.654)LS(0.346)PGVSR 125.71 0.0050199 35449000 261540 283410 235930 251190 222040 291940 317050 208800 220070 242940 TRUE FALSE 281563.7035 269336.2715 243795.7884 230666.9735 213321.5939 303049.9813 275420.9542 236090.8769 239211.2908 235012.8877 1.198077715 1.146048943 1.037371996 0.981507762 0.907701684 1.28950367 1.17193979 1.004586937 1.017864565 1 17.84238035 S(ph)LSPIIGK ddPTM_A459_MK2206_30min_R1 1 SLSPIIGK 8 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(0.5)LS(0.5)PIIGK 103.55 0.015327 444990000 8933.7 9516.4 10248 7231.3 8338.4 6588 10080 7813.5 7873.1 7362.3 TRUE FALSE 8173.841902 8896.88063 9552.394313 7788.255979 8006.263871 6961.006867 9407.581592 7745.187393 8691.536919 8274.397307 0.987847404 1.07523005 1.154451975 0.941247524 0.967594808 0.841270561 1.136950674 0.936042482 1.050413293 1 13.01443852 -5.779018763 24.99758721 0.979267355 1.072781874 0.204716476 0.081693798 358.9126313 510366.4206 0.022776515 0.033869835 1.66E-06 5.779018763 0.093514519 S(ph)LSPIIGK ddPTM_A459_MK2206_30min_R2 2 SLSPIIGK 8 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(0.999)LS(0.001)PIIGK;S(0.959)LS(0.041)PIIGK 140.83 0.0023163 1083000000 438520 504620 514430 542750 382050 396680 510010 393170 435860 410160 TRUE FALSE 472093.4284 479561.3046 531580.8394 498405.5888 367048.7974 411775.9354 443045.0744 444558.669 473770.3149 396776.5128 1.189822011 1.208643378 1.339748756 1.256136825 0.925076927 1.037803202 1.11661114 1.120425869 1.194048286 1 18.5979671 -6.222172467 24.41869187 1.072836817 1.252246166 0.568388248 0.077915658 330.9316284 205794.2637 0.024447166 0.031560574 6.00E-07 6.222172467 0.179409349 S(ph)LSPILPGR ddPTM_A459_MK2206_30min_R2 1 SLSPILPGR 9 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 S(0.936)LS(0.064)PILPGR 85.533 0.035045 19191000 10708 12569 15792 13544 14128 11117 14992 9630.5 14086 11159 TRUE FALSE 11527.81271 11944.84174 16318.4974 12437.41187 13573.26373 11540.06523 13023.53239 10889.23942 15311.17482 10794.88274 1.067896057 1.10652816 1.511688249 1.152158126 1.25737945 1.069031086 1.206454271 1.008740871 1.418373426 1 13.39805995 -6.739896119 24.97572916 1.14518709 1.225406927 0.056861933 0.158482656 791.6574567 917790.0875 0.051361848 0.051319401 1.82E-07 6.739896119 0.080219837 S(ph)LSPLIK ddPTM_A459_MK2206_30min_R2 1 SLSPLIK 7 0 Q7Z4H7;Q5VY60;Q7Z4H7-3 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 S(0.656)LS(0.344)PLIK 109.48 0.015825 32934000 226890 259100 234170 279290 314580 247460 298720 236820 217290 303280 TRUE FALSE 244260.8728 246233.4708 241977.1109 256471.1136 302228.0086 256877.2637 259497.7052 267773.1871 236189.4914 293383.9984 0.832563719 0.839287323 0.824779512 0.874182351 1.030144828 0.875566715 0.884498495 0.912705494 0.805052398 1 18.16243066 -6.000497105 22.27819562 0.913681885 0.835678304 0.29533512 0.059381562 6.250097406 280263.8526 0.016781199 0.024486527 9.99E-07 6.000497105 -0.078003581 S(ph)LSPPQSQSK ddPTM_A459_MK2206_30min_R2 2 SLSPPQSQSK 10 0 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 S(0.942)LS(0.058)PPQSQSK;S(0.963)LS(0.036)PPQSQSK 94.538 0.023727 113146000 73059 92515 89199 89075 89766 81303 90561 81557 82414 87115 TRUE FALSE 78652.45321 87920.83963 92172.85014 81797.28756 86241.3358 84397.04264 78670.23192 92216.77993 89582.22075 84272.44468 0.933311636 1.043292858 1.093748383 0.970629105 1.023363403 1.001478514 0.933522603 1.094269666 1.063007263 1 16.36277336 -7.789670016 24.99999039 1.058978817 1.005021153 0.174845955 0.050856209 385.6528012 341514.3383 0.027951518 0.013430943 1.62E-08 7.789670016 -0.053957663 S(ph)LSPSHLTEDR ddPTM_A459_MK2206_30min_R2 4 SLSPSHLTEDR 11 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.669)LS(0.327)PS(0.004)HLTEDR;S(0.626)LS(0.256)PS(0.009)HLT(0.109)EDR;S(0.419)LS(0.304)PS(0.121)HLT(0.155)EDR;S(0.971)LS(0.029)PSHLTEDR 116.74 0.0052097 294868000 83715 117288 95650 126319 121850 124926 114812 100155 100956 104338 TRUE FALSE 90124.28477 111463.6485 98838.92326 115998.3336 117065.5568 129680.1465 99737.04649 113245.6024 109736.9704 100933.4596 0.892907913 1.104328029 0.979248345 1.1492555 1.159829032 1.284808298 0.988146516 1.121982768 1.087220936 1 16.62304498 -3.90670018 1.045818258 1.11353796 2.09E-16 0.305821617 0.089506759 11.67597581 2.67522688 0.028068177 22.42670821 0.000123965 3.90670018 -1.11353796 S(ph)LSQGSTNATVLDVAQTGGHK ddPTM_A459_MK2206_30min_R2 2 SLSQGSTNATVLDVAQTGGHK 21 0 A0A2R8Y661;H0Y8T6 A0A2R8Y661 RAPGEF2 1 S(0.485)LS(0.38)QGS(0.093)T(0.037)NAT(0.004)VLDVAQTGGHK;S(0.358)LS(0.358)QGS(0.209)T(0.051)NAT(0.023)VLDVAQTGGHK 137.88 1.87E-05 20766000 157527 166821 172481 167759 149555 128614 170820 129763 138077 173494 TRUE FALSE 169587.3882 158536.9117 178231.4305 154052.5531 143682.7192 133508.4959 148391.1288 146723.4696 150086.6879 167832.905 1.01045375 0.944611617 1.061957609 0.91789243 0.856105775 0.795484627 0.884159926 0.8742235 0.894262587 1 17.35666607 -5.957806714 6.196184369 0.874370945 0.999177964 0.491492631 0.054690262 0.146642668 14.28014491 0.015058255 0.022318831 1.10E-06 5.957806714 0.124807019 S(ph)LSRTPETLLPFAEAEAFLK ddPTM_A459_MK2206_30min_R1 1 SLSRTPETLLPFAEAEAFLK 20 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 S(0.693)LS(0.13)RT(0.177)PETLLPFAEAEAFLK 88.573 0.0010784 3063200 878.89 823.03 753.82 1067.9 800.77 907.36 842.3 1106 631.22 476.09 TRUE FALSE 804.1357903 769.4505974 702.6527987 1150.149843 768.8736352 958.7339391 786.1117039 1096.330359 696.8375778 535.0716235 1.502856356 1.438032898 1.313193912 2.149525022 1.436954608 1.791786178 1.469170984 2.04894132 1.302325796 1 9.06358821 -8.521061206 24.6665372 0.999999978 1.637541091 0.387028196 0.262087249 122.5696169 1663427.985 0.243966085 0.062991772 3.01E-09 8.521061206 0.637541113 S(ph)LSSLR ddPTM_A459_MK2206_30min_R2 1 SLSSLR 6 0 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915;C9J1G1;Q70YC5-2;Q70YC5;Q70YC5-4;Q70YC5-3;Q8TF61 H0Y9X0 FRYL;ZNF365;FBXO41 Protein furry homolog-like;Protein ZNF365;F-box only protein 41 1 S(0.998)LS(0.002)SLR 90.37 0.046914 20050000 31560 27806 28834 27881 29154 22990 24586 23631 25929 32203 TRUE FALSE 33976.25787 26425.19447 29795.31117 25603.03311 28009.26747 23864.90056 21357.82867 26719.65284 28184.25755 31152.21875 1.090652905 0.84826043 0.956442667 0.821868687 0.899109874 0.766073863 0.685595746 0.857712674 0.904727133 1 14.9270473 -1.522880814 0.942453829 0.838350503 159.4478156 0.358100827 0.088187852 1302.144402 2.355908114 0.029202462 445082.4388 0.029999857 1.522880814 158.6094651 S(ph)LSSPTVTLSAPLEGAK ddPTM_A459_MK2206_30min_R2 1 SLSSPTVTLSAPLEGAK 17 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-2;Q96PU5-9;Q96PU5-6;Q96PU5-5 A0A1B0GVY1;Q96PU5-9 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 S(0.696)LS(0.13)S(0.173)PT(0.001)VTLSAPLEGAK 109.77 0.0014561 4736900 27086 39042 40164 47163 43393 45687 54126 40095 60370 56007 TRUE FALSE 29159.72499 37103.23105 41503.04771 43309.63203 41689.17279 47425.6508 47019.19118 45335.55417 65620.87348 54179.49618 0.538205909 0.684820526 0.766028676 0.799373104 0.769464017 0.875343149 0.867841056 0.836765887 1.21117541 1 15.72545936 -4.144108589 0.222079027 1.076008598 6.05E-16 0.714829823 0.091315326 9.028781003 0.312826251 0.155274792 2.795789927 7.18E-05 4.144108589 -1.076008598 S(ph)LSTSGESLYHVLGLDK ddPTM_A459_MK2206_30min_R1 1 SLSTSGESLYHVLGLDK 17 0 Q9H3Z4-2;Q9H3Z4 Q9H3Z4-2 DNAJC5 DnaJ homolog subfamily C member 5 1 S(0.55)LS(0.422)T(0.012)S(0.015)GES(0.001)LYHVLGLDK 129.2 0.0006329 125260000 7763.6 3677.2 3849.1 3378.6 9002.1 7998.6 10287 8005.2 6107.3 5708.5 TRUE FALSE 7103.265052 3437.813612 3587.833816 3638.820357 8643.527295 8451.47382 9600.773 7935.21138 6742.17569 6415.712077 1.107167056 0.535842876 0.559226127 0.567173264 1.34724364 1.317308775 1.496446986 1.23684032 1.050885016 1 12.64739368 -6.263015328 24.97312771 1.269838529 0.671664055 0.63447905 0.203250992 84.29595832 1335787.214 0.062386094 0.074533859 5.46E-07 6.263015328 -0.598174474 S(ph)LSTSGESLYHVLGLDK ddPTM_A459_MK2206_30min_R2 1 SLSTSGESLYHVLGLDK 17 0 Q9H3Z4-2;Q9H3Z4 Q9H3Z4-2 DNAJC5 DnaJ homolog subfamily C member 5 1 S(0.571)LS(0.414)T(0.015)SGESLYHVLGLDK 139.38 0.00033508 30807000 62146 59042 62526 81763 88901 110070 128800 53391 120160 82208 TRUE FALSE 66903.94554 56110.06014 64610.58563 75082.70135 85410.30005 114258.791 111888.4053 60369.38702 130611.2996 79525.55969 0.841288584 0.705560078 0.812450562 0.944132951 1.0739981 1.436755572 1.406948982 0.759119298 1.642381394 1 16.279131 -6.201895717 1.989004325 1.24162821 0.781014258 0.42841221 0.232279585 0.31521536 2.451126507 0.076258013 0.103831023 6.28E-07 6.201895717 -0.460613952 S(ph)LSVEHLETK ddPTM_A459_MK2206_30min_R2 1 SLSVEHLETK 10 0 J3KN34;P26045-2;P26045 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 S(0.944)LS(0.056)VEHLETK 102.97 0.007244 0 31330 38632 38800 36809 29047 30730 26404 14812 23174 19976 TRUE FALSE 33728.64889 36713.59106 40093.57263 33801.58695 27906.46883 31899.45168 22937.12308 16747.97926 25189.63263 19324.18476 1.74541122 1.899877874 2.074787275 1.749185665 1.444121404 1.650752779 1.186964592 0.866684906 1.303528865 1 14.23811993 -6.91861282 0.925204597 1.027429865 1.902019762 0.803291897 0.167454438 0.240985389 0.435174001 0.111663468 0.087760438 1.21E-07 6.91861282 0.874589898 S(ph)LSVPDSGR ddPTM_A459_MK2206_30min_R1 1 SLSVPDSGR 9 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(0.5)LS(0.5)VPDSGR 120.63 0.0065183 21957000 4133.7 3656.3 5055 3273.1 4726.4 2965 2929.9 3559.5 2770.7 2983.6 TRUE FALSE 3782.107108 3418.274205 4711.880684 3525.194729 4538.13748 3132.875738 2734.451717 3528.379667 3058.72418 3353.230893 1.127899399 1.019397207 1.405176331 1.051283029 1.35336266 0.93428572 0.815467769 1.05223284 0.912172253 1 11.71133611 -6.789039705 24.948921 0.938135858 1.185956235 0.494108191 0.125663621 180.0339404 162737.7797 0.042761257 0.03772057 1.63E-07 6.789039705 0.247820377 S(ph)LSVPVDLSR ddPTM_A459_MK2206_30min_R1 1 SLSVPVDLSR 10 0 Q9NYF3;D6RHW3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.619)LS(0.381)VPVDLS(0.001)R 126.71 0.0034106 52427000 4848 4963 5287.7 4441 5580.1 4294.5 4954.5 5123.4 3956.7 3469.4 TRUE FALSE 4435.652142 4639.907798 4928.785656 4783.046589 5357.832801 4537.650879 4623.994345 5078.606654 4368.013124 3899.215465 1.137575541 1.189959324 1.264045473 1.226668963 1.374079696 1.163734326 1.18587813 1.302468843 1.120228714 1 11.92896816 -8.529051299 4.875312772 1.000161002 1.23076881 0.550672021 0.066143682 0.114196694 10.74315693 0.064448513 0.01677605 2.96E-09 8.529051299 0.230607808 S(ph)LSVPVDLSR ddPTM_A459_MK2206_30min_R2 1 SLSVPVDLSR 10 0 Q9NYF3;D6RHW3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.999)LS(0.001)VPVDLSR 161.19 0.00042956 28882000 39822 45139 42456 41896 43508 43124 42432 37547 36015 36199 TRUE FALSE 42870.80294 42897.4629 43871.46185 38472.96278 41799.65731 44765.11404 36860.62743 42454.52182 39147.5196 35017.82959 1.224256427 1.225017752 1.252832125 1.098667828 1.193667848 1.278352044 1.052624559 1.212368736 1.117931067 1 15.09580205 -14.52287868 0.12102717 0.369955088 1.276108364 0.496092946 0.062374268 130.2710799 1.015574545 19.86134208 0.57692714 3.00E-15 14.52287868 0.906153276 S(ph)LTAHSLLPLAEK ddPTM_A459_MK2206_30min_R1 1 SLTAHSLLPLAEK 13 0 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 S(0.5)LT(0.5)AHS(0.001)LLPLAEK 104.94 0.0049419 11483000 7943.4 9614.9 8332.5 8327.2 8898.4 8242.1 8680.1 8008 7403.9 6614.8 TRUE FALSE 7267.772118 8988.968262 7766.913116 8968.562387 8543.957885 8708.760579 8101.066367 7937.9869 8173.5619 7434.291363 0.977601195 1.209122406 1.044741555 1.206377575 1.149263254 1.171431163 1.089689114 1.067752999 1.099440619 1 12.85997952 -8.597005443 0.839128972 1.003086173 1.128112802 0.203889544 0.06906204 1.066015205 1.643208506 0.063260997 0.022507144 2.53E-09 8.597005443 0.125026629 S(ph)LTAHSLLPLAEK ddPTM_A459_MK2206_30min_R2 1 SLTAHSLLPLAEK 13 0 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 S(0.949)LT(0.05)AHSLLPLAEK 121.42 0.0028449 3749300 11692 22891 19282 20847 18332 21933 16346 13783 18430 15386 TRUE FALSE 12587.14851 21754.26623 19924.85226 19143.73341 17612.19357 22767.67568 14199.75056 15584.48542 20033.00809 14883.95608 0.845685679 1.46159167 1.338679861 1.286199268 1.18330056 1.529679042 0.954030668 1.047066072 1.345946466 1 13.86147042 -7.284458819 24.98956779 1.090682996 1.282053662 0.176666252 0.197713008 1421.463414 1543113.368 0.080087078 0.054031904 5.19E-08 7.284458819 0.191370666 S(ph)LTELVQQPCPPIEASK ddPTM_A459_MK2206_30min_R2 2 SLTELVQQPCPPIEASK 17 0 A0A2R8YDI1;A0A2R8Y852;P39880-6;P39880-4;P39880-5;P39880-2;P39880;P39880-3 A0A2R8YDI1 CUX1 Homeobox protein cut-like 1 1 S(0.999)LT(0.001)ELVQQPCPPIEASK;S(0.998)LT(0.002)ELVQQPCPPIEASK 234.12 7.40E-17 5912100 34245 26288 33647 27078 26685 23797 33194 27606 22389 34077 TRUE FALSE 36866.82353 24982.57615 34768.77419 24865.64078 25637.21282 24702.61151 28835.58793 31214.19899 24336.35475 32965.07028 1.118360228 0.757849928 1.054715609 0.754302678 0.777708423 0.749357162 0.874731577 0.946887075 0.738246712 1 15.00865054 -4.749489538 24.98805053 0.847471879 1.118360843 0.349753869 0.109534223 616.1259368 1288287.48 0.026336898 0.428840189 1.78E-05 4.749489538 0.270888964 S(ph)LTFTGGAK ddPTM_A459_MK2206_30min_R1 1 SLTFTGGAK 9 0 F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2;Q8NHQ8 F5H8C5 RASSF8 Ras association domain-containing protein 8 1 S(0.897)LT(0.096)FT(0.007)GGAK 105.17 0.013905 10387000 2789 3546.6 3097 3463.3 3614.5 3144.5 3704.7 3581.3 2798.1 3379.2 TRUE FALSE 2551.780904 3315.715695 2886.784269 3730.043966 3470.526811 3322.538873 3457.566223 3549.989072 3088.972508 3797.840808 0.671903072 0.873052838 0.760111973 0.982148583 0.913815767 0.874849432 0.910403147 0.934738777 0.813349654 1 11.89096372 -3.934788925 0.85042053 0.908992414 1.87E-18 0.522908596 0.066129666 6.778417085 1.323132948 0.021952419 8.118431527 0.000116201 3.934788925 -0.908992414 S(ph)LTFTGGAK ddPTM_A459_MK2206_30min_R2 4 SLTFTGGAK 9 0 F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2;Q8NHQ8 F5H8C5 RASSF8 Ras association domain-containing protein 8 1 S(0.888)LT(0.101)FT(0.011)GGAK;S(1)LTFTGGAK;S(0.999)LT(0.001)FTGGAK;S(0.836)LT(0.164)FTGGAK 121.5 0.0062415 22360600 95745 142675 149023 150648 122018 134635 113779 105714 137676 128669 TRUE FALSE 103075.3108 135589.967 153991.3524 138339.5765 117226.9602 139758.6293 98839.68063 119531.1828 149650.8096 124470.5411 0.828110089 1.089333796 1.23717107 1.11142424 0.941804858 1.122824952 0.794080911 0.96031705 1.202299021 1 16.92544481 -6.250854195 24.51060354 0.997060163 1.080330175 0.042198897 0.138857533 1668.377691 3863223.248 0.042253354 0.053936359 5.61E-07 6.250854195 0.083270012 S(ph)LTIAEFK ddPTM_A459_MK2206_30min_R2 2 SLTIAEFK 8 0 K7EK42;A0A494C0X0;Q99426;K7EL99 K7EK42 TBCB Tubulin-folding cofactor B 1 S(0.964)LT(0.036)IAEFK;S(0.999)LT(0.001)IAEFK 123.86 0.0057027 4821900 30673 34730 34376 34860 39503 31192 41004 30288 30139 35244 TRUE FALSE 33021.34846 33005.3587 35522.07868 32011.82649 37951.91373 32379.03342 35620.12555 34246.74559 32760.43574 34093.99117 0.968538658 0.968069668 1.04188678 0.938928691 1.113155499 0.94969912 1.044762562 1.004480391 0.96088591 1 15.05722988 -5.209436474 22.07345713 1.007586541 0.968303858 0.089332095 0.049006617 221.7379797 94116.14556 0.011570167 0.03061156 6.17E-06 5.209436474 -0.039282683 S(ph)LTLDAAPDHNPPCR ddPTM_A459_MK2206_30min_R2 2 SLTLDAAPDHNPPCR 15 0 B7Z5R6;Q14596-2;Q14596 B7Z5R6 NBR1 Next to BRCA1 gene 1 protein 1 S(0.843)LT(0.157)LDAAPDHNPPCR;S(0.87)LT(0.13)LDAAPDHNPPCR 140.75 0.00025683 21786000 78237 80513 60234 88672 72648 74753 82859 60398 55971 68012 TRUE FALSE 84226.88487 76514.8415 62242.1715 81427.21395 69795.47449 77597.7778 71979.51377 68292.22598 60839.25641 65792.77401 1.28018443 1.162967251 0.946033549 1.237631566 1.060837995 1.179427057 1.094033727 1.037989764 0.924710309 1 16.00564152 -7.855605719 2.265158574 0.964277491 1.136475784 0.393141972 0.089144408 0.333113786 3.320984644 0.064054068 0.024981676 1.39E-08 7.855605719 0.172198293 S(ph)LTLLPHGTPNSASPCSQR ddPTM_A459_MK2206_30min_R2 1 SLTLLPHGTPNSASPCSQR 19 0 Q9BXB5 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 1 S(0.788)LT(0.212)LLPHGTPNSASPCSQR 92.913 0.0014196 4247000 12362 15175 14718 20247 17462 16461 17321 16376 11534 18048 TRUE FALSE 13308.44422 14421.43157 15208.69077 18592.75533 16776.35414 17087.43489 15046.73189 18516.39943 12537.20647 17459.09524 0.762264255 0.826012538 0.871104176 1.064932351 0.960894818 0.978712508 0.8618277 1.060558934 0.718090273 1 14.09169118 -5.36940416 2.913168203 0.950311573 0.787974927 0.288532296 0.0967711 0.317294333 5.108517409 0.025072532 0.064159135 4.27E-06 5.36940416 -0.162336647 S(ph)LTNDWEDHLAVK ddPTM_A459_MK2206_30min_R1 1 SLTNDWEDHLAVK 13 0 P07900;P07900-2;P08238 P07900;P08238 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta 1 S(0.655)LT(0.345)NDWEDHLAVK 99.915 0.0085739 0 1236.7 1487.5 1315.2 901.16 1050.6 1439.3 1395.4 1145.8 1545.3 1151.2 TRUE FALSE 1131.512171 1390.66348 1225.927888 970.5674993 1008.752377 1520.791922 1302.315412 1135.782391 1705.939465 1293.819347 0.874551902 1.074851356 0.947526323 0.750156891 0.779670191 1.175428336 1.006566655 0.877852379 1.318529877 1 10.33742048 -6.761529489 25 1.063721916 0.891822482 0.321889926 0.137414785 3.510234332 973618.5843 0.048370309 0.045417212 1.73E-07 6.761529489 -0.171899434 S(ph)LTNLSFLTDSEK ddPTM_A459_MK2206_30min_R2 2 SLTNLSFLTDSEK 13 0 A0A0A0MRJ3;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-6 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 S(0.999)LT(0.001)NLSFLTDSEK;S(1)LTNLSFLTDSEK 213.83 2.72E-06 17075000 70144 86394 80002 80937 68317 60588 80123 71396 68008 64000 TRUE FALSE 75514.27857 82103.79959 82669.22675 74324.1882 65634.53131 62893.7188 69602.75386 80727.70234 73923.21291 61911.68524 1.219709628 1.326143833 1.335276635 1.200487241 1.060131558 1.015861845 1.124226446 1.303917056 1.194010672 1 15.91792411 -5.969329341 4.892407073 1.126804848 1.29512845 0.448228158 0.087827033 0.200647647 12.04323029 0.027777544 0.040887029 1.07E-06 5.969329341 0.168323602 S(ph)LTNLSFLTDSEKK ddPTM_A459_MK2206_30min_R2 2 SLTNLSFLTDSEKK 14 1 A0A0A0MRJ3;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-6 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 S(0.716)LT(0.258)NLS(0.026)FLTDSEKK;S(0.925)LT(0.072)NLS(0.002)FLTDSEKK 72.583 0.026407 6613700 25356 44961 34563 35512 31034 25195 32302 31389 33481 26682 TRUE FALSE 27297.27486 42728.30212 35715.31317 32610.556 29815.44923 26153.81338 28060.7086 35491.65007 36393.11686 25811.36853 1.057567902 1.655406302 1.383704748 1.263418326 1.15512857 1.01326721 1.087145324 1.375039454 1.409964637 1 14.65571902 -5.913175474 3.342385855 1.18128636 1.394358444 0.172514604 0.185031293 0.404368388 9.000002967 0.055638943 0.08642993 1.22E-06 5.913175474 0.213072084 S(ph)LTNSHLEK ddPTM_A459_MK2206_30min_R1 2 SLTNSHLEK 9 0 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 S(0.988)LT(0.011)NS(0.001)HLEK;S(0.958)LT(0.04)NS(0.002)HLEK 98.407 0.019727 30681000 7902.3 7316.7 5852.4 6438.9 7796 7430.2 8954.9 8664.3 9274.3 9305.6 TRUE FALSE 7230.167888 6840.3815 5455.155394 6934.825194 7485.468812 7850.891503 8357.53496 8588.548939 10238.39667 10458.44798 0.691323216 0.654053212 0.521602766 0.663083586 0.715734192 0.750674624 0.799118089 0.821206832 0.978959468 1 13.35238115 -7.615949365 0.643473985 1.0088855 0.621709377 0.873227389 0.049723906 0.256158536 0.211195896 0.049008587 0.027820973 2.42E-08 7.615949365 -0.387176122 S(ph)LTNSHLEK ddPTM_A459_MK2206_30min_R2 1 SLTNSHLEK 9 0 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 S(0.963)LT(0.027)NS(0.01)HLEK 71.888 0.045678 6040700 66479 46542 43005 52851 48827 62241 77720 45280 73027 71437 TRUE FALSE 71568.68335 44230.79196 44438.76524 48532.90424 46909.80664 64609.62487 67515.27064 51198.25147 79378.75646 69106.01654 1.03563607 0.640042563 0.643052045 0.702296365 0.678809299 0.934934874 0.97698108 0.740865326 1.148651889 1 16.0765237 -6.771560819 23.51063536 0.945134256 0.726938896 0.373644599 0.141449413 109.900719 255280.6054 0.048291192 0.043134806 1.69E-07 6.771560819 -0.21819536 S(ph)LTPPPSSTESK ddPTM_A459_MK2206_30min_R2 2 SLTPPPSSTESK 12 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 S(0.637)LT(0.362)PPPSSTESK;S(0.624)LT(0.279)PPPS(0.044)S(0.044)T(0.009)ESK 121.21 0.0038432 10983600 81326 95408 90213 98621 96092 74657 98005 80927 79281 98169 TRUE FALSE 87552.38109 90670.17746 93220.65639 90563.34883 92318.94526 77498.12445 85136.82577 91504.43676 86176.71807 94965.75357 0.921936359 0.954767103 0.981623932 0.953642186 0.972128813 0.816063913 0.896500292 0.963551947 0.907450474 1 16.53511972 -4.435328385 12.63292368 0.935218281 0.752478623 0.0058954 0.050699935 9762765.306 36545118.87 0.01319585 46876432.49 3.67E-05 4.435328385 -0.182739658 S(ph)LTQPITTEEVVIAATLQASAHQK ddPTM_A459_MK2206_30min_R1 2 SLTQPITTEEVVIAATLQASAHQK 24 0 O95425-4 O95425-4 SVIL Supervillin 1 S(0.793)LT(0.204)QPIT(0.003)TEEVVIAATLQASAHQK;S(0.498)LT(0.498)QPIT(0.004)TEEVVIAATLQASAHQK 240.12 6.67E-45 35752000 7445.7 4656.3 6201.5 4577.5 8727.8 7672.3 7994.9 7658.4 4631.9 4627.5 TRUE FALSE 6812.404116 4353.174024 5780.559458 4930.059843 8380.153245 8106.698996 7461.574809 7591.443416 5113.40258 5200.789636 1.309878806 0.837021746 1.111477268 0.947944483 1.611323247 1.558743876 1.434700369 1.459671309 0.983197349 1 12.34451497 -6.246281313 24.92688431 1.379801208 1.040533269 0.268125066 0.22893873 916.2666776 1506766.427 0.066401499 0.085382529 5.67E-07 6.246281313 -0.339267939 S(ph)LVESVSSSPNKESNEEEQVWHFLGK ddPTM_A459_MK2206_30min_R2 1 SLVESVSSSPNKESNEEEQVWHFLGK 26 1 Q9H2U2-4;Q9H2U2-6;Q9H2U2-3;Q9H2U2;Q9H2U2-2 Q9H2U2-4 PPA2 "Inorganic pyrophosphatase 2, mitochondrial" 1 S(0.236)LVES(0.181)VS(0.152)S(0.152)S(0.14)PNKES(0.14)NEEEQVWHFLGK 46.178 0.024055 14898000 18884 23531 18326 18789 20600 18051 19978 19903 18990 18132 TRUE FALSE 20329.77356 22362.48476 18936.97969 17253.8786 19791.14049 18737.94345 17354.8646 22504.39044 20641.71587 17540.35432 1.159028671 1.274916364 1.079623555 0.98366762 1.12832045 1.068276222 0.989424973 1.283006604 1.176812936 1 14.09839027 -5.274939574 24.5328752 1.092146171 1.216972517 0.239943992 0.091190173 811.7495924 1475132.502 0.024896426 0.052337093 5.31E-06 5.274939574 0.124826345 S(ph)LVGTPYWMAPELISR ddPTM_A459_MK2206_30min_R1 8 SLVGTPYWMAPELISR 16 0 O96013;O96013-2;O96013-4;O96013-3;M0R1R1 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 S(0.999)LVGT(0.001)PYWMAPELISR;S(0.975)LVGT(0.024)PYWMAPELISR;S(1)LVGTPYWMAPELISR;S(0.672)LVGT(0.283)PY(0.045)WMAPELISR;S(0.991)LVGT(0.009)PYWMAPELISR;S(0.571)LVGT(0.412)PY(0.017)WMAPELISR;S(1)LVGTPYWMAPELISR;S(0.998)LVGT(0.002)PYWMAPELISR 254.72 5.74E-30 228839900 11121.43 10066.78 10404.23 8773.88 9784.05 8873.55 11103.69 9330.94 9258.4 9398.9 TRUE FALSE 10175.49398 9411.430792 9698.019855 9449.645758 9394.33057 9375.962733 10362.9831 9249.360575 10220.84381 10563.30669 0.963286807 0.890954989 0.918085609 0.894572697 0.889336156 0.887597322 0.981035901 0.875612235 0.967579955 1 13.3667739 -8.476731457 5.283360946 0.999831417 0.912287474 0.447866252 0.032604921 0.148393772 9.610379738 0.030095737 0.007820467 3.34E-09 8.476731457 -0.087543942 S(ph)LVGTPYWMAPELISR ddPTM_A459_MK2206_30min_R2 10 SLVGTPYWMAPELISR 16 0 O96013;O96013-2;O96013-4;O96013-3;M0R1R1 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 S(0.981)LVGT(0.019)PYWMAPELISR;S(0.942)LVGT(0.058)PYWMAPELISR;S(0.992)LVGT(0.008)PYWMAPELISR;S(0.95)LVGT(0.05)PYWMAPELISR;S(0.998)LVGT(0.001)PY(0.001)WMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR 275.42 3.48E-51 1815018200 134169.2 131889.5 135226.2 148354.9 127590.7 140461.5 153422.5 117223.08 112325.2 123337.6 TRUE FALSE 144441.2971 125340.0592 139734.574 136233.8301 122580.848 145806.8608 133277.9415 132544.539 122095.0429 119313.1042 1.210607151 1.050513772 1.17115865 1.141817833 1.027387971 1.222052362 1.117043617 1.110896744 1.023316288 1 16.86439298 -8.265072768 2.429247803 0.999385627 1.131794937 0.412657285 0.058060569 0.281927371 3.0428352 0.05111172 0.014708149 5.43E-09 8.265072768 0.13240931 S(ph)LYAS(ph)SPGGVYATR ddPTM_A459_MK2206_30min_R2 1 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 2 S(1)LYAS(0.562)S(0.404)PGGVYAT(0.034)R 134.25 0.012012 3500200 13429 13506 14662 14989 14508 15015 12945 10150 15108 13349 TRUE FALSE 14457.13457 12835.31168 15150.82376 13764.35075 13938.34302 15586.40635 11245.30595 11476.63985 16422.06653 12913.42322 1.119543154 0.993951136 1.173261613 1.065894807 1.07936856 1.206992606 0.870823 0.88873722 1.271705128 1 13.65658388 -7.253854917 24.97595431 0.998544437 1.101341437 0.146791077 0.115294067 1117.487903 3679943.581 0.04407219 0.033486097 5.57E-08 7.253854917 0.102796999 S(ph)LYASS(ph)PGGVYATR ddPTM_A459_MK2206_30min_R2 1 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 2 S(0.998)LY(0.002)AS(0.215)S(0.785)PGGVYATR 153.48 0.0065992 3189700 15832 21496 19797 21242 19493 18297 20332 14564 16208 19007 TRUE FALSE 17044.11009 20428.5399 20457.0221 19506.46065 18727.60688 18993.30516 17662.38398 16467.56481 17617.74254 18386.80315 0.926975177 1.111043597 1.112592653 1.060894626 1.018535236 1.032985724 0.960601135 0.895618704 0.958173229 1 14.16638304 -7.187329044 2.192709342 0.941776157 1.054239714 0.389530765 0.054736283 0.299325624 2.81726074 0.026024369 0.017876563 6.50E-08 7.187329044 0.112463557 S(ph)LYASSPGGVYATR ddPTM_A459_MK2206_30min_R1 1 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.971)LY(0.001)AS(0.023)S(0.001)PGGVY(0.002)AT(0.001)R 81.128 0.03255 13665000 504.7 755.56 444.5 392.1 506.48 421.51 640.37 525.12 582.53 364.59 TRUE FALSE 461.7726147 706.3729067 414.3285784 422.2996099 486.3058291 445.3755319 597.6520857 520.5289312 643.0860781 409.7581617 1.126939395 1.723877576 1.011153937 1.030606952 1.186811819 1.086922906 1.458548338 1.270332064 1.569428356 1 8.678628876 -7.262392358 24.99111186 1.347104853 1.202335823 0.065555616 0.233562867 247.4287733 6488512.157 0.094199548 0.067704942 5.47E-08 7.262392358 -0.14476903 S(ph)LYASSPGGVYATR ddPTM_A459_MK2206_30min_R2 4 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.934)LY(0.001)AS(0.06)S(0.002)PGGVY(0.002)AT(0.001)R;S(0.995)LYAS(0.001)S(0.003)PGGVYATR;S(0.998)LYAS(0.002)SPGGVYATR;S(0.986)LYAS(0.012)S(0.002)PGGVYATR 188.19 9.16E-05 491142000 179079 226089 104662.4 210696 178816 194520 216232 126199 176977 187262 TRUE FALSE 192789.4259 214861.749 108151.7922 193481.4628 171794.7854 201922.5949 187840.4787 142693.6426 192370.1396 181151.6563 1.064243242 1.186087687 0.59702348 1.068063449 0.948347859 1.114660495 1.036923882 0.787702666 1.061928682 1 17.46683847 -8.968712365 0.003400128 0.000134599 1.94625982 0 0.164422069 358415.7011 536.5482348 154776.0768 152308.2921 1.07E-09 8.968712365 1.946125221 S(ph)LYESFVSSSDR ddPTM_A459_MK2206_30min_R1 3 SLYESFVSSSDR 12 0 P18615;P18615-3;A0A0A0MT02;A2ABK4 P18615 NELFE Negative elongation factor E 1 S(0.999)LYES(0.001)FVSSSDR;S(0.997)LYES(0.002)FVS(0.001)SSDR;S(0.931)LYES(0.068)FVS(0.001)SSDR 143.55 0.00081657 18448400 3123.73 2406.95 2468.24 2187.53 3328.42 3590.03 3253.72 2555.62 1998.72 2037.75 TRUE FALSE 2858.04036 2250.257118 2300.702746 2356.01394 3195.841983 3793.294396 3036.670276 2533.276484 2206.494096 2290.201854 1.247942558 0.982558421 1.004585138 1.028736369 1.395441182 1.656314438 1.325940013 1.106136771 0.963449616 1 11.16125905 -4.453208346 21.87022338 1.180504141 3.50030566 0.00770394 0.217286295 3366.890471 1052030.655 0.058912822 1760.48688 3.52E-05 4.453208346 2.31980152 S(ph)LYESFVSSSDR ddPTM_A459_MK2206_30min_R2 4 SLYESFVSSSDR 12 0 P18615;P18615-3;A0A0A0MT02;A2ABK4 P18615 NELFE Negative elongation factor E 1 S(1)LYESFVSSSDR;S(0.999)LY(0.001)ESFVSSSDR;S(1)LYESFVSSSDR;S(1)LYESFVSSSDR 164.13 0.00050729 11326400 28366.7 31804.18 30627.6 40068.27 34726.2 34953.4 35830.65 28397.1 27834.48 31075 TRUE FALSE 30538.47636 30224.83067 31648.7089 36794.56417 33362.6749 36283.57613 31126.04261 32108.69847 30255.47276 30061.02529 1.015882727 1.005449095 1.052815351 1.223995649 1.10983157 1.206997292 1.035428509 1.06811721 1.006468424 1 14.8756066 -7.979428462 1.717106294 1.003016184 1.099805634 0.210449158 0.06970173 0.665035118 3.546631263 0.065799136 0.022148124 1.05E-08 7.979428462 0.096789451 S(ph)LYSFIK ddPTM_A459_MK2206_30min_R1 1 SLYSFIK 7 0 P09525;Q6P452;P09525-2 P09525 ANXA4 Annexin A4;Annexin 1 S(0.999)LYS(0.001)FIK 87.308 0.033762 3541400 2335.8 2867.5 2514.7 1859.6 2671.3 2457.1 2490.5 1763.6 2160 2222.8 TRUE FALSE 2137.127944 2680.825229 2344.00917 2002.826714 2564.896464 2596.218879 2324.363289 1748.181031 2384.53973 2498.177245 0.855474906 1.0731125 0.938287776 0.801715218 1.02670716 1.039245267 0.930423689 0.699782625 0.954511828 1 11.28666012 -7.538794879 24.99128159 0.859308973 0.95888003 0.066059245 0.106879274 468.9800523 736376.6085 0.049177458 0.028403094 2.89E-08 7.538794879 0.099571056 S(ph)LYSFIK ddPTM_A459_MK2206_30min_R2 1 SLYSFIK 7 0 P09525;Q6P452;P09525-2 P09525 ANXA4 Annexin A4;Annexin 1 S(0.97)LY(0.002)S(0.028)FIK 84.615 0.037299 4796800 24138 24704 26985 33105 22748 24871 27243 16315 20816 31691 TRUE FALSE 25986.02384 23477.23528 27884.66643 30400.2156 21854.79922 25817.48333 23665.96138 18447.42652 22626.53805 30656.92527 0.847639599 0.765805282 0.90957153 0.991626373 0.712882947 0.842141967 0.771961349 0.601737661 0.73805634 1 14.90392539 -6.287389497 24.98117856 0.760809089 0.872807548 0.158598209 0.10937205 1269.677707 1222266.376 0.034202173 0.038793406 5.16E-07 6.287389497 0.111998459 S(ph)LYYYIQQDTK ddPTM_A459_MK2206_30min_R2 3 SLYYYIQQDTK 11 0 P07355;P07355-2;A6NMY6 P07355 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein 1 S(1)LYYYIQQDTK;S(1)LYYYIQQDTK;S(0.415)LY(0.186)Y(0.004)Y(0.001)IQQDT(0.393)K 172.58 0.00023979 11099400 45651 57397 72395 61435 47063 54042 54157 41816 64727 75221 TRUE FALSE 49146.07566 54546.74844 74808.61317 56415.56398 45215.07015 56098.60618 47046.12085 47281.49478 70356.83746 72766.54493 0.675393833 0.749613005 1.028063284 0.775295351 0.621371678 0.770939533 0.646535037 0.649769682 0.966884404 1 16.15098769 -8.339148289 6.667938361 0.991087511 0.74497516 0.439646506 0.110032732 0.278758851 19.63072369 0.113823771 0.029607229 4.58E-09 8.339148289 -0.246112351 S(ph)MDEFTASTPADLGEAGR ddPTM_A459_MK2206_30min_R1 2 SMDEFTASTPADLGEAGR 18 0 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 1 S(1)MDEFTASTPADLGEAGR;S(0.998)MDEFT(0.001)ASTPADLGEAGR 174.68 1.40E-08 6938500 592.34 526.47 408.74 484.97 437.75 555.24 424.13 429.74 471.08 334.63 TRUE FALSE 541.9583725 492.1967073 380.9958676 522.3224734 420.3134905 586.677209 395.8370616 425.9828285 520.0504518 376.0864907 1.441047168 1.30873275 1.013053851 1.388836043 1.117597949 1.559952892 1.052516034 1.132672507 1.382794821 1 8.554920675 -14.10996437 0.212748733 9.42E-11 1.293126466 0.174549643 0.172578212 226.5986652 2.647532059 97.40246621 0.351148218 7.76E-15 14.10996437 1.293126466 S(ph)MDEFTASTPADLGEAGR ddPTM_A459_MK2206_30min_R2 1 SMDEFTASTPADLGEAGR 18 0 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 1 S(1)MDEFTASTPADLGEAGR 131.18 0.00075186 0 1757.5 2239.8 2504.8 2015.5 2795.9 3087.7 2417.8 1059.8 2654.8 3177.3 TRUE FALSE 1892.055551 2128.574789 2588.308782 1850.827203 2686.118918 3205.204587 2100.339956 1198.319499 2885.709705 3073.624961 0.615577884 0.69252912 0.842102994 0.602164293 0.873925398 1.042809265 0.683342952 0.389871736 0.938862009 1 11.58572543 -5.0027239 4.206479313 0.775505769 0.6254208 0.082798543 0.18713957 0.586480798 25.07735578 0.048967475 0.190834195 9.94E-06 5.0027239 -0.150084968 S(ph)MDELNHDFQALALEGR ddPTM_A459_MK2206_30min_R1 3 SMDELNHDFQALALEGR 17 0 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4 Q5T1Z4 PUM1 Pumilio homolog 1 1 S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR 170.47 5.67E-07 6576000 2709.32 2547.4 2309.47 1976.39 2277.75 2587.76 2961.73 2798.19 2787.19 2919.28 TRUE FALSE 2478.878107 2381.563797 2152.709611 2128.6119 2187.022394 2734.276735 2764.158396 2773.72572 3076.928375 3280.942446 0.755538431 0.725877956 0.656125381 0.648780628 0.66658359 0.833381499 0.842489145 0.845405174 0.937818455 1 11.67989457 -7.595250787 0.775931613 0.981478071 0.686821463 0.841713013 0.045716555 0.271919861 0.307298279 0.045348631 0.022603231 2.54E-08 7.595250787 -0.294656608 S(ph)MDELNHDFQALALEGR ddPTM_A459_MK2206_30min_R2 2 SMDELNHDFQALALEGR 17 0 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4 Q5T1Z4 PUM1 Pumilio homolog 1 1 S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR 128.45 0.00067081 3433600 6443.2 7964.6 7297.6 8346 9355 7314.4 11511.2 6852.4 7874.6 9447.9 TRUE FALSE 6936.496346 7569.089546 7540.898342 7664.105102 8987.675695 7592.754617 9999.765613 7748.032208 8559.518474 9139.615797 0.758948352 0.828162771 0.825078265 0.838558783 0.983375658 0.830752056 1.094112251 0.847741566 0.936529354 1 13.1579178 -5.962269926 1.075692689 0.948853738 0.784542783 0.451535126 0.073169628 0.519859579 1.215976159 0.028033329 0.060540062 1.09E-06 5.962269926 -0.164310955 S(ph)MDLGIADETK ddPTM_A459_MK2206_30min_R1 4 SMDLGIADETK 11 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-4;Q8TEW0-8 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(1)MDLGIADETK;S(1)MDLGIADETK;S(1)MDLGIADETK;S(1)MDLGIADETK 194.06 1.93E-05 243987000 14975.5 14825.9 13701.2 11104.9 11048.3 10311 12280.4 12014.7 13432.9 12158.8 TRUE FALSE 13701.75509 13860.73122 12771.20072 11960.20132 10608.22282 10894.79991 11461.19692 11909.65674 14829.29803 13665.12394 1.00268063 1.014314343 0.934583599 0.875235481 0.776299056 0.797270479 0.838718842 0.87153668 1.085193087 1 13.73821092 -5.481742883 2.848073321 0.876015187 1.008668562 0.201533819 0.087689462 0.377584021 6.039924559 0.025387731 0.058139813 3.30E-06 5.481742883 0.132653375 S(ph)MDLGIADETK ddPTM_A459_MK2206_30min_R2 4 SMDLGIADETK 11 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-4;Q8TEW0-8 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(1)MDLGIADETK;S(1)MDLGIADETK;S(1)MDLGIADETK;S(0.999)MDLGIADET(0.001)K 174.72 0.0001158 120687000 782402 745627 682388 705640 712132 528358 823520 651235 619656 820415 TRUE FALSE 842303.2987 708600.2474 705138.4753 647986.9548 684170.1195 548465.0339 715390.8348 736353.6505 673552.5588 793644.9257 1.061310003 0.892842913 0.888481048 0.8164696 0.862060724 0.691071052 0.901399116 0.92781246 0.848682499 1 19.59813417 -4.514381779 1.724842142 0.856654825 1.2750101 0.362070604 0.075971345 2.233332827 3.725574724 0.020735676 1.923391231 3.06E-05 4.514381779 0.418355275 S(ph)MDLVADETK ddPTM_A459_MK2206_30min_R1 1 SMDLVADETK 10 0 F5GZI3 F5GZI3 PARD3 1 S(1)MDLVADETK 165.35 0.00035915 6310000 3002.6 2427.4 2022.7 1616.7 2075.4 2459.5 2456.4 2304.9 2479.6 2243.4 TRUE FALSE 2747.213103 2269.375819 1885.40476 1741.218514 1992.732423 2598.754765 2292.538038 2284.748502 2737.363293 2521.329329 1.089589159 0.900071162 0.747782028 0.690595431 0.790349916 1.03070818 0.909257673 0.906168217 1.085682565 1 11.29996886 -6.758412724 24.99993305 0.975679742 0.832978421 0.285262948 0.111652602 116.8174571 964904.6859 0.040734401 0.039077252 1.74E-07 6.758412724 -0.142701321 S(ph)MDLVADETK ddPTM_A459_MK2206_30min_R2 2 SMDLVADETK 10 0 F5GZI3 F5GZI3 PARD3 1 S(1)MDLVADETK;S(1)MDLVADETK 132.86 0.0023684 10740700 56069 47683 46748 52698 46570 42173 60585 43059 43459 50196 TRUE FALSE 60361.68575 45315.13156 48306.55499 48392.40483 44741.4278 43777.92307 52630.11672 48686.95914 47238.98526 48558.10863 1.243081484 0.93321451 0.994819534 0.996587515 0.921399722 0.901557419 1.083858458 1.002653532 0.972834128 1 15.56742461 -4.755385561 24.99960364 0.978801577 1.243081916 0.724044412 0.048993463 110.7968067 457497.3692 0.012698016 0.113598689 1.76E-05 4.755385561 0.264280339 S(ph)MDSSDLSDGAVTLQEYLELKK ddPTM_A459_MK2206_30min_R1 3 SMDSSDLSDGAVTLQEYLELKK 22 1 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QLH1 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 S(0.827)MDS(0.14)S(0.033)DLSDGAVTLQEYLELKK;S(0.988)MDS(0.006)S(0.006)DLSDGAVTLQEYLELKK;S(0.861)MDS(0.06)S(0.079)DLSDGAVTLQEYLELKK 180.9 1.29E-16 62503500 7590.6 8361.6 8640.7 7477.7 8624.9 6418.4 8713.7 8359.7 7306.7 6337.38 TRUE FALSE 6944.97961 7817.25832 8054.193358 8053.63375 8281.351969 6781.804261 8132.424972 8286.612024 8066.257612 7122.502479 0.975075773 1.097543784 1.130809485 1.130730916 1.162702575 0.952165939 1.14179321 1.163441087 1.132503307 1 12.7981685 -4.763800173 4.999404839 1.107352793 0.966858776 0.23969419 0.066884104 0.242933994 16.0002238 0.016566181 0.119979149 1.72E-05 4.763800173 -0.140494016 S(ph)MDSSDLSDGAVTLQEYLELKK ddPTM_A459_MK2206_30min_R2 1 SMDSSDLSDGAVTLQEYLELKK 22 1 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QLH1 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 S(0.98)MDS(0.016)S(0.004)DLSDGAVTLQEYLELKK 124.66 3.99E-05 0 14193 24611 21530 25237 22193 19295 26889 20400 20761 16980 TRUE FALSE 15279.62699 23388.85353 22247.79945 23175.05637 21321.59131 20029.28475 23358.442 23066.35004 22566.75425 16425.94399 0.930213022 1.42389707 1.354430495 1.410881249 1.29804359 1.219368869 1.422045638 1.404263284 1.373848241 1 14.00368866 -4.754054144 24.99831696 1.338417768 0.930212303 0.467446907 0.124791024 213.9845081 724256.2092 0.028895128 0.292260933 1.76E-05 4.754054144 -0.408205465 S(ph)MGFLSIK ddPTM_A459_MK2206_30min_R2 1 SMGFLSIK 8 0 Q12923-3;Q12923;Q12923-4;Q12923-2 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 S(1)MGFLSIK 107.55 0.013252 3042400 15321 16991 13638 13221 15068 13933 17187 13675 13837 14727 TRUE FALSE 16493.98754 16147.25165 14092.68411 12140.80201 14476.35461 14463.23008 14930.32625 15462.36945 15040.51725 14246.4592 1.157760487 1.133422096 0.989206084 0.852197858 1.016137021 1.015215773 1.048002598 1.085348243 1.055737222 1 13.79831578 -5.222908585 6.23476698 1.007213168 1.147841804 0.465820354 0.059095335 0.200973113 22.63867225 0.01708657 0.045211308 5.99E-06 5.222908585 0.140628636 S(ph)MGYDDLDYGMMSDYGTAR ddPTM_A459_MK2206_30min_R1 11 SMGYDDLDYGMMSDYGTAR 19 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 S(0.406)MGY(0.027)DDLDY(0.072)GMMS(0.482)DY(0.01)GT(0.004)AR;S(1)MGYDDLDYGMMSDYGTAR;S(0.994)MGY(0.006)DDLDYGMMSDYGTAR;S(0.999)MGY(0.001)DDLDYGMMSDYGTAR;S(0.802)MGY(0.198)DDLDYGMMSDYGTAR;S(0.933)MGY(0.065)DDLDY(0.001)GMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(0.993)MGY(0.007)DDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(0.997)MGYDDLDYGMMS(0.002)DY(0.002)GTAR 306.75 1.43E-101 233373400 12678.88 12727.16 11041.94 8944.39 11673.57 12682.92 13610.78 10104.63 11207.98 11160.22 TRUE FALSE 11600.47468 11898.61957 10292.44388 9633.288468 11208.58699 13401.01597 12702.8297 10016.28629 12373.08963 12542.83231 0.924868833 0.948638974 0.820583711 0.768031353 0.893624878 1.068420245 1.012756082 0.798566547 0.986466958 1 13.61457554 -6.538031576 24.84124473 0.965110978 0.863577957 0.290548586 0.080201519 330.7952395 542295.2666 0.02846019 0.028469891 2.90E-07 6.538031576 -0.10153302 S(ph)MGYDDLDYGMMSDYGTAR ddPTM_A459_MK2206_30min_R2 9 SMGYDDLDYGMMSDYGTAR 19 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 S(0.98)MGY(0.02)DDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(0.618)MGY(0.004)DDLDY(0.092)GMMS(0.284)DY(0.001)GT(0.002)AR;S(1)MGYDDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(0.997)MGYDDLDY(0.003)GMMSDYGTAR;S(0.997)MGYDDLDY(0.002)GMMSDYGTAR;S(0.997)MGY(0.003)DDLDYGMMSDYGTAR 251 9.57E-38 25709900 80095.5 90990.3 86940.9 99590.7 80819.2 94594.9 89520.3 70346 81507.5 83632.1 TRUE FALSE 86227.67306 86471.85401 89839.46621 91453.82124 77645.83212 98194.77521 77766.17708 79540.46373 88596.87502 80903.19143 1.065812999 1.068831186 1.110456394 1.130410551 0.959737567 1.213731788 0.961225085 0.98315607 1.095097405 1 16.30390899 S(ph)MPAETIK ddPTM_A459_MK2206_30min_R1 4 SMPAETIK 8 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(1)MPAETIK;S(1)MPAETIK;S(1)MPAETIK;S(1)MPAETIK 139.38 0.0024082 431471000 26177.6 24869.4 25041.2 21497.1 24744.4 20408.1 22503.8 22843.4 21504.9 17806.7 TRUE FALSE 23951.05766 23250.39754 23341.47311 23152.81037 23758.77815 21563.58899 21002.61256 22643.68256 23740.41131 20012.72843 1.196791219 1.161780495 1.166331377 1.15690424 1.187183359 1.077493709 1.049462727 1.13146404 1.186265601 1 14.28863025 -6.760634025 24.99995691 1.094686557 1.171777127 0.444585073 0.047179965 23.26971116 722345.228 0.016189161 0.01529969 1.74E-07 6.760634025 0.07709057 S(ph)MPAETIK ddPTM_A459_MK2206_30min_R2 6 SMPAETIK 8 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(1)MPAETIK;S(1)MPAETIK;S(1)MPAETIK;S(1)MPAETIK;S(1)MPAETIK;S(1)MPAETIK 162.64 0.00036287 492019700 778442 869231 818210 824126 782864 710017 839924 663410 667364 803676 TRUE FALSE 838040.118 826066.2525 845488.713 756792.2696 752124.8258 737037.1945 729640.9699 750119.9648 725410.1144 777452.1179 1.077931488 1.062530069 1.087512264 0.973426211 0.967422698 0.94801619 0.938502775 0.96484394 0.933060825 1 19.5683943 -5.819007884 4.974847102 0.956831696 1.074890174 0.889708454 0.018607065 0.055263324 2.774159073 0.005104337 0.007899574 1.52E-06 5.819007884 0.118058478 S(ph)MPVDER ddPTM_A459_MK2206_30min_R1 1 SMPVDER 7 0 P55042 P55042 RRAD GTP-binding protein RAD 1 S(1)MPVDER 109.71 0.015725 19334000 5453.1 5297 5544.8 4883.2 5278.5 4737.6 5565.1 4573.7 4103.3 4080.6 TRUE FALSE 4989.28521 4952.164337 5168.434425 5259.30491 5068.246168 5005.838818 5193.862333 4533.712623 4529.852719 4586.135535 1.087906184 1.079812033 1.126969403 1.146783576 1.105123503 1.091515674 1.13251392 0.988569262 0.987727616 1 12.16306328 -7.767303739 24.99994548 0.991111284 1.11007989 0.879381266 0.020024085 48.4794627 206665.0838 0.011453138 0.005732398 1.71E-08 7.767303739 0.118968607 S(ph)MPVDER ddPTM_A459_MK2206_30min_R2 1 SMPVDER 7 0 P55042 P55042 RRAD GTP-binding protein RAD 1 S(1)MPVDER 85.862 0.035661 37407000 100850 116430 109220 117800 125970 133850 102960 81190 111020 95624 TRUE FALSE 108571.1535 110648.2555 112861.3403 108175.3632 121023.7849 138943.7555 89441.22832 91801.81177 120676.3189 92503.79671 1.173694026 1.19614826 1.220072519 1.169415386 1.308311541 1.502033003 0.966892511 0.992411285 1.304555307 1 16.49722496 -7.298345199 24.99402466 1.065332391 1.254680718 0.365441607 0.126101599 706.1056719 478198.914 0.054352096 0.036645075 5.03E-08 7.298345199 0.189348327 S(ph)MPVLGSVSSVTK ddPTM_A459_MK2206_30min_R1 2 SMPVLGSVSSVTK 13 0 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 S(1)MPVLGSVSSVTK;S(1)MPVLGSVSSVTK 208.15 1.01E-05 121685000 5981.2 4676.7 5253 4832.7 6193.7 4404.4 5668.7 5640.7 5224.8 4923.9 TRUE FALSE 5472.467531 4372.24598 4896.440996 5204.915391 5946.991814 4653.773322 5290.551366 5591.383955 5767.936657 5533.909906 0.988897113 0.79008261 0.884806778 0.940549355 1.074645579 0.840955744 0.956024123 1.010385794 1.042289585 1 12.43408344 -6.623522016 0.463516941 1.019321396 0.872049493 0.22528065 0.075445101 1.872913383 0.829411472 0.072586907 0.118606844 2.38E-07 6.623522016 -0.147271903 S(ph)MPVLGSVSSVTK ddPTM_A459_MK2206_30min_R2 2 SMPVLGSVSSVTK 13 0 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 S(1)MPVLGSVSSVTK;S(1)MPVLGSVSSVTK 110.39 0.017396 50737400 49629 58195 53324 64278 59655 51003 58116 48125 46745 53990 TRUE FALSE 53428.6344 55305.12092 55101.79555 59026.28178 57312.64496 52943.9549 50485.29939 54415.10274 50810.7956 52228.31072 1.022982242 1.058910774 1.055017763 1.130158739 1.097348242 1.013702227 0.966627078 1.041869859 0.972859258 1 15.67254442 -6.875377762 5.577676998 0.997815104 1.074033283 0.568916243 0.032373939 0.166991448 7.523820249 0.012112224 0.010688623 1.33E-07 6.875377762 0.076218179 S(ph)MS(ph)TRAAR ddPTM_A459_MK2206_30min_R1 1 SMSTRAAR 8 1 H0YK09 H0YK09 DET1 2 S(0.667)MS(0.667)T(0.667)RAAR 64.757 0.025635 20447000 920.47 772.03 1083.4 689.1 1180.6 1088.6 1048.1 1049.3 634.91 774.03 TRUE FALSE 842.1791929 721.7707067 1009.861827 742.1746014 1133.574202 1150.235591 978.1831614 1040.126081 700.9111665 869.92268 0.9681081 0.82969524 1.16086389 0.853150077 1.303074662 1.322227386 1.124448395 1.195653481 0.805716626 1 9.764743368 -6.251333855 24.93763528 1.144784549 0.959000794 0.20645288 0.162551079 1050.805006 2593094.39 0.048565321 0.061956696 5.61E-07 6.251333855 -0.185783755 S(ph)MSAAFCSLLAPER ddPTM_A459_MK2206_30min_R2 1 SMSAAFCSLLAPER 14 0 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 1 S(0.99)MS(0.01)AAFCSLLAPER 180.06 7.33E-05 24862000 22330 21137 28425 27070 22727 34159 24951 20293 26246 24174 TRUE FALSE 24039.60197 20087.36732 29372.67531 24858.29441 21834.62379 35458.94468 21674.90373 22945.36478 28528.82964 23385.20436 1.027983403 0.858977626 1.256036717 1.062992396 0.933693948 1.51629826 0.926863986 0.981191544 1.21995212 1 14.51330842 -5.24828012 24.88668611 1.111147399 0.943480527 0.128613558 0.175576587 1530.682725 2894801.225 0.043748611 0.114222888 5.65E-06 5.24828012 -0.167666872 S(ph)MSDVSAEDVQNLR ddPTM_A459_MK2206_30min_R1 3 SMSDVSAEDVQNLR 14 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;Q8WWI1-3;E9PMP7;E9PK58;E9PLU6 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.944)MS(0.052)DVS(0.004)AEDVQNLR;S(1)MSDVSAEDVQNLR;S(0.62)MS(0.38)DVSAEDVQNLR 163.62 0.00026676 19206500 2730.97 2989.61 3238.2 2675.25 2969.6 2471.08 3201.92 2569.06 3236.99 3315.02 TRUE FALSE 2498.686661 2794.985846 3018.400006 2881.298219 2851.314544 2610.990414 2988.325759 2546.598979 3573.486694 3725.709705 0.670660588 0.750188841 0.810154372 0.773355534 0.765307759 0.700803504 0.802082287 0.683520505 0.959142547 1 11.86329955 -8.34446052 5.487015002 0.992330003 0.749227521 0.809986062 0.045561173 0.093348773 4.527515017 0.042711534 0.011180838 4.52E-09 8.34446052 -0.243102482 S(ph)MSDVSAEDVQNLR ddPTM_A459_MK2206_30min_R2 4 SMSDVSAEDVQNLR 14 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;Q8WWI1-3;E9PMP7;E9PK58;E9PLU6 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.974)MS(0.026)DVSAEDVQNLR;S(0.994)MS(0.004)DVS(0.003)AEDVQNLR;S(0.774)MS(0.226)DVSAEDVQNLR;S(0.746)MS(0.253)DVSAEDVQNLR 199.33 8.32E-05 43419900 62926.9 55548.4 55779.9 62139 59185.5 51662.6 68027.6 51074.3 49851.2 58140.1 TRUE FALSE 67744.63185 52789.94723 57639.57403 57062.04493 56861.57989 53628.65644 59095.4944 57749.88637 54187.16727 56242.9933 1.204499047 0.938604867 1.024831195 1.014562732 1.010998465 0.95351711 1.050717448 1.026792548 0.963447429 1 15.77938576 -4.750430531 24.99271996 1.000994841 1.204499485 0.768084113 0.03398183 223.1334419 506533.7533 0.008229042 0.120498113 1.78E-05 4.750430531 0.203504644 S(ph)MSENAVR ddPTM_A459_MK2206_30min_R1 1 SMSENAVR 8 0 A0A0A0MS29;Q9GZY8-2;C9JHF5;H7C433;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8-5 MFF Mitochondrial fission factor 1 S(0.579)MS(0.421)ENAVR 110.54 0.011981 130120000 2605.5 2913.2 2514.9 2767.6 3969.3 3666.5 5265.1 4501.8 4695.9 4366.4 TRUE FALSE 2383.888543 2723.550151 2344.195595 2980.761032 3811.194376 3874.094061 4913.874786 4462.441237 5184.055609 4907.342597 0.48577993 0.554994908 0.477691449 0.607408383 0.776630997 0.789448461 1.001331105 0.909339658 1.056387547 1 12.26072628 -6.597905481 0.879352105 1.00762158 0.488155045 0.945228356 0.049479682 0.118462311 0.201256727 0.02766079 0.030764931 2.52E-07 6.597905481 -0.519466535 down S(ph)MSENAVR ddPTM_A459_MK2206_30min_R2 1 SMSENAVR 8 0 A0A0A0MS29;Q9GZY8-2;C9JHF5;H7C433;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8-5 MFF Mitochondrial fission factor 1 S(0.759)MS(0.241)ENAVR 97.597 0.020141 113640000 208130 132190 154180 157510 161270 274120 347590 118380 319330 222070 TRUE FALSE 224064.5928 125625.6368 159320.2842 144640.9292 154937.7295 284551.8287 301951.0155 133852.6725 347104.7462 214823.8741 1.043015325 0.584784337 0.741632116 0.673300069 0.721231428 1.324581962 1.405574761 0.623080991 1.615764298 1 17.71279481 -6.751486213 24.95578206 1.183478862 0.738422481 0.400739359 0.269211068 200.4877901 502686.4285 0.085297884 0.084321326 1.77E-07 6.751486213 -0.445056381 S(ph)MSFQGIR ddPTM_A459_MK2206_30min_R1 1 SMSFQGIR 8 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 S(0.644)MS(0.356)FQGIR 120.27 0.0074671 12178000 2828.8 1911.8 2439.8 2190.3 2426.7 2137.9 2126.6 2075.8 2353 1775 TRUE FALSE 2588.195705 1787.341473 2274.193174 2358.997286 2330.0394 2258.94605 1984.738394 2057.651499 2597.60277 1994.900401 1.297405978 0.895955243 1.140003367 1.182513816 1.167997861 1.132360317 0.994906008 1.031455755 1.302121534 1 10.962101 S(ph)MSGGHGLR ddPTM_A459_MK2206_30min_R1 1 SMSGGHGLR 9 0 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4 P49815 TSC2 Tuberin 1 S(0.986)MS(0.014)GGHGLR 92.239 0.026157 6781200 2188.2 1541 2073.6 1600.5 2505.5 1927.7 2334.3 2100.8 1540.9 1502.9 TRUE FALSE 2002.082099 1440.68062 1932.849809 1723.770787 2405.70063 2036.844708 2178.583106 2082.432927 1701.082069 1689.090598 1.185301784 0.852932709 1.144313876 1.02053187 1.424257901 1.205882449 1.289796479 1.23287225 1.007099365 1 10.722031 S(ph)MSIDDTPR ddPTM_A459_MK2206_30min_R1 2 SMSIDDTPR 9 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0C4DGY6;A0A1B0GVW2 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(1)MSIDDTPR;S(1)MSIDDTPR 200.71 0.0019885 62359000 6670.2 6535.6 6339 5454.4 6629.1 6049.2 6482.6 6025.3 5518.7 5159.8 TRUE FALSE 6102.864463 6110.131252 5908.726341 5874.498833 6365.04891 6391.700476 6050.157582 5972.621437 6092.388614 5799.034979 1.052393111 1.053646214 1.018915451 1.013013175 1.097604849 1.102200711 1.043304206 1.02993368 1.05058663 1 12.50159712 S(ph)MSIDDTPR ddPTM_A459_MK2206_30min_R2 4 SMSIDDTPR 9 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0C4DGY6;A0A1B0GVW2 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.988)MS(0.012)IDDTPR;S(1)MSIDDTPR;S(0.972)MS(0.025)IDDT(0.003)PR;S(0.9)MS(0.099)IDDT(0.001)PR 164.66 0.00097838 42425800 262878 296903 252249 298731 279120 282294 300738 241203 251516 268134 TRUE FALSE 283004.1418 282159.2288 260658.8558 274323.7217 268160.3463 293036.896 261250.7393 272729.0603 273392.407 259384.8095 1.091059042 1.087801669 1.0049118 1.057593628 1.033832115 1.129738077 1.007193674 1.051445768 1.054003153 1 17.98473447 S(ph)MSPNLLNR ddPTM_A459_MK2206_30min_R1 2 SMSPNLLNR 9 0 Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3;F8VVB8 Q9Y4F3-3;F8VVB8 KIAA0430 Meiosis arrest female protein 1 1 S(0.586)MS(0.414)PNLLNR;S(0.939)MS(0.061)PNLLNR 115.29 0.0082148 10068600 5222.2 5396.4 4938.4 4204 4882.9 3662.9 4911.5 4857.6 3437.2 4194.3 TRUE FALSE 4778.024467 5045.093379 4603.195167 4527.792808 4688.403753 3870.290233 4583.862797 4815.130515 3794.50924 4713.921549 1.013598639 1.070253997 0.976510771 0.960515096 0.994586716 0.821034078 0.972409648 1.021470227 0.80495808 1 12.20271203 -5.646953993 1.357321293 0.933064463 1.044854937 0.250163483 0.069950457 0.661482542 2.356544484 0.022703489 0.065236276 2.25E-06 5.646953993 0.111790474 S(ph)MSPNLLNR ddPTM_A459_MK2206_30min_R2 1 SMSPNLLNR 9 0 Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3;F8VVB8 Q9Y4F3-3;F8VVB8 KIAA0430 Meiosis arrest female protein 1 1 S(0.812)MS(0.188)PNLLNR 123.62 0.0055697 8054200 34235 47267 43733 48627 46143 37870 45783 39311 30645 47931 TRUE FALSE 36856.05792 44919.78951 45191.03639 44654.01855 44331.19397 39311.16939 39771.6371 44449.08267 33310.44671 46367.0154 0.794876651 0.968787599 0.974637595 0.963055702 0.956093326 0.847826177 0.85775711 0.958635838 0.718408257 1 15.50081124 -6.757916188 24.98940003 0.872767191 0.937712977 0.091985823 0.08482159 198.0814496 1404957.877 0.027382504 0.026355219 1.75E-07 6.757916188 0.064945785 S(ph)MSYSSQK ddPTM_A459_MK2206_30min_R1 1 SMSYSSQK 8 0 Q9C0B5-2;Q9C0B5 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5 1 S(0.795)MS(0.095)Y(0.002)S(0.077)S(0.031)QK 90.149 0.028672 4091100 1664.5 1379.9 1064.5 1341 1368.2 1363.5 1713.7 1641.5 1183.1 1693.6 TRUE FALSE 1522.925534 1290.068259 992.2447059 1444.284052 1313.701697 1440.700192 1599.3822 1627.148539 1306.087479 1903.415954 0.800101276 0.677764761 0.521296832 0.758785303 0.690181089 0.756902446 0.84026941 0.854857045 0.686180798 1 10.89437515 -6.952819102 1.669285142 0.836394243 0.678059295 0.355408232 0.097905839 0.442269673 2.508661461 0.045491566 0.035647143 1.11E-07 6.952819102 -0.158334947 S(ph)MSYSSQK ddPTM_A459_MK2206_30min_R2 1 SMSYSSQK 8 0 Q9C0B5-2;Q9C0B5 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5 1 S(0.494)MS(0.494)YS(0.01)S(0.001)QK 80.688 0.045541 6297400 23877 15319 15096 19187 16460 17120 29726 11749 23047 24371 TRUE FALSE 25705.04148 14558.28074 15599.29311 17619.36072 15813.6977 17771.5136 25822.94049 13284.63464 25051.5864 23575.77627 1.090315805 0.617510133 0.66166615 0.747350184 0.670760424 0.753803964 1.095316659 0.563486627 1.062598581 1 14.52501765 -7.041885399 24.88544672 0.898343823 0.740694842 0.165293962 0.183529612 911.7569509 541700.9282 0.066874517 0.051805899 9.08E-08 7.041885399 -0.157648981 S(ph)MVWPGDGLVPDTAEPHVAPSPTLPSTEDVIR ddPTM_A459_MK2206_30min_R1 4 SMVWPGDGLVPDTAEPHVAPSPTLPSTEDVIR 32 0 F8VXI9;Q14161-6;Q14161-4;Q14161-3;Q14161;R4GNG3;F8WAK2;Q14161-11;Q14161-7;Q14161-9;Q14161-10;Q14161-8;Q14161-5 F8VXI9 GIT2 ARF GTPase-activating protein GIT2 1 S(0.844)MVWPGDGLVPDT(0.156)AEPHVAPSPTLPSTEDVIR;S(0.962)MVWPGDGLVPDT(0.037)AEPHVAPSPT(0.001)LPSTEDVIR;S(0.997)MVWPGDGLVPDT(0.003)AEPHVAPSPTLPSTEDVIR;S(0.994)MVWPGDGLVPDT(0.006)AEPHVAPSPTLPSTEDVIR 95.801 7.66E-09 12918100 505.808 723.61 436.813 478.5 641.325 572.07 886.88 254.06 415.24 641.56 TRUE FALSE 462.7863735 676.5028575 407.1633506 515.3541529 615.7796672 604.460109 827.7178534 251.8387802 458.405684 721.0412963 0.641830608 0.938230391 0.564687976 0.714735974 0.854014424 0.83831552 1.147947916 0.349270952 0.635755103 1 9.493938079 -1.999232899 23.59606558 0.76278311 0.124133046 0 0.221977918 0 0 0.050493012 0 0.010017679 1.999232899 -0.638650064 S(ph)MVWPGDGLVPDTAEPHVAPSPTLPSTEDVIR ddPTM_A459_MK2206_30min_R2 1 SMVWPGDGLVPDTAEPHVAPSPTLPSTEDVIR 32 0 F8VXI9;Q14161-6;Q14161-4;Q14161-3;Q14161;R4GNG3;F8WAK2;Q14161-11;Q14161-7;Q14161-9;Q14161-10;Q14161-8;Q14161-5 F8VXI9 GIT2 ARF GTPase-activating protein GIT2 1 S(0.997)MVWPGDGLVPDT(0.002)AEPHVAPSPTLPSTEDVIR 53.631 0.034949 0 0 765.92 883.99 2081 477.6 2132.2 1269.6 1217.2 956.91 739.88 TRUE FALSE 0 727.8855266 913.4617854 1910.975643 458.8470243 2213.342365 1102.899995 1376.292219 1040.140302 715.7377762 0 1.016972348 1.276252024 2.669938219 0.641082586 3.092392827 1.540927462 1.922900069 1.453242146 1 9.483287316 -5.030585776 1.834858356 1.794971039 7.84E-22 0.364618569 0.694599709 0.531696803 2.656556886 0.181077981 1.397390324 9.32E-06 5.030585776 -1.794971039 S(ph)NDRNSMDIQCEVDALLER ddPTM_A459_MK2206_30min_R1 2 SNDRNSMDIQCEVDALLER 19 1 Q02241;H7BYN4;A0A2U3TZL8;A0A2R8Y531;H0YME6;Q02241-2 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 S(0.982)NDRNS(0.018)MDIQCEVDALLER;S(0.715)NDRNS(0.285)MDIQCEVDALLER 198.67 1.36E-15 25268300 2277.3 2324.9 2068.45 1988.9 2066.25 2334.19 1929.73 2297 1665.52 1428.19 TRUE FALSE 2083.603676 2173.548587 1928.049377 2142.085423 1983.946887 2466.349821 1801.001233 2276.917571 1838.656764 1605.124959 1.298094372 1.354130452 1.201183351 1.33452876 1.236007748 1.536546925 1.122031791 1.41852979 1.145491355 1 10.6484699 -8.511532279 5.062271257 1.000274608 1.308956952 0.463142561 0.108934862 0.121152755 11.1232334 0.096435852 0.025080027 3.08E-09 8.511532279 0.308682344 S(ph)NDRNSMDIQCEVDALLER ddPTM_A459_MK2206_30min_R2 2 SNDRNSMDIQCEVDALLER 19 1 Q02241;H7BYN4;A0A2U3TZL8;A0A2R8Y531;H0YME6;Q02241-2 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 S(0.752)NDRNS(0.248)MDIQCEVDALLER;S(0.894)NDRNS(0.106)MDIQCEVDALLER 106.44 0.00045211 4312600 6073.8 7232.8 7669.3 7846.1 9199.9 8291.3 8561.5 7145.4 7731.7 6611.7 TRUE FALSE 6538.814798 6873.629669 7924.990634 7205.048532 8838.6657 8606.831231 7437.364766 8079.328314 8404.18929 6395.96077 1.022335038 1.0746829 1.239061795 1.1264998 1.381913682 1.34566667 1.162822136 1.263192287 1.313983871 1 12.64294537 -5.126343371 1.38982247 1.250309618 0.985271311 0.302101831 0.107760082 0.796200834 2.126736548 0.031472982 0.248016127 7.48E-06 5.126343371 -0.265038307 S(ph)NEDQSMGNWQIK ddPTM_A459_MK2206_30min_R2 1 SNEDQSMGNWQIK 13 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(1)NEDQSMGNWQIK 98.156 0.015944 0 13208 11234 11011 11074 13020 8776.2 13434 10478 7367.5 11633 TRUE FALSE 14219.21464 10676.1359 11378.10124 10169.21878 12508.76938 9110.184441 11670.09966 11847.51058 8008.311833 11253.41616 1.263546503 0.948701776 1.011079754 0.903656155 1.111553079 0.809548346 1.03702729 1.052792361 0.711633847 1 13.4580754 -4.760275164 24.89287001 0.958863569 1.263546888 0.399634355 0.113681004 27.44238622 586497.3742 0.026421628 0.158479096 1.74E-05 4.760275164 0.304683318 S(ph)NFSNSADDIK ddPTM_A459_MK2206_30min_R1 3 SNFSNSADDIK 11 0 P45973 P45973 CBX5 Chromobox protein homolog 5 1 S(0.928)NFS(0.072)NSADDIK;S(0.999)NFS(0.001)NSADDIK;S(1)NFSNSADDIK 192.46 2.01E-05 48443400 7911.1 7054 6747.1 6062.4 6415.1 5303.9 6429.9 6501 6302 5348.6 TRUE FALSE 7238.219402 6594.783318 6289.12565 6529.327098 6159.572983 5604.202234 6000.973103 6444.162442 6957.115452 6011.224948 1.204117208 1.097078112 1.046230295 1.086189114 1.024678503 0.932289555 0.99829455 1.072021509 1.157354036 1 12.55344329 -4.079709625 0.982858529 1.033584367 1.671424227 0.446205851 0.056466129 6.688088719 1.926495666 0.019858587 6.292998411 8.32E-05 4.079709625 0.63783986 S(ph)NFSNSADDIK ddPTM_A459_MK2206_30min_R2 1 SNFSNSADDIK 11 0 P45973 P45973 CBX5 Chromobox protein homolog 5 1 S(1)NFSNSADDIK 128.96 0.002676 21050000 59662 50116 38179 39874 48080 43224 51376 36855 36871 55299 TRUE FALSE 64229.76859 47627.31232 39451.8688 36616.16665 46192.13762 44868.91961 44630.26949 41672.07504 40077.97293 53494.59816 1.200677654 0.890320031 0.737492572 0.684483442 0.863491627 0.838756083 0.834294883 0.778995945 0.749196635 1 15.7071056 -4.788112102 3.231404229 0.802384028 1.254192267 0.668863366 0.081848451 0.182823433 2.960332919 0.020291951 0.208590355 1.63E-05 4.788112102 0.451808239 S(ph)NGDLSPK ddPTM_A459_MK2206_30min_R1 1 SNGDLSPK 8 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 S(0.999)NGDLS(0.001)PK 85.522 0.035156 21937000 8416.3 8107.9 6362 4489.2 3773 3772.4 7209.7 6233 1600.5 6948.2 TRUE FALSE 7700.449489 7580.074236 5930.165166 4834.958962 3622.713421 3985.990028 6728.754068 6178.505538 1766.877702 7808.995472 0.986099879 0.970684932 0.759401793 0.619152486 0.463915421 0.510435695 0.861667047 0.791203627 0.226261842 1 12.93092126 -5.409951644 2.552844074 0.627557509 0.988562034 0.298194205 0.2055749 0.349044903 4.354500016 0.056698598 0.148084591 3.89E-06 5.409951644 0.361004525 S(ph)NGDLSPK ddPTM_A459_MK2206_30min_R2 2 SNGDLSPK 8 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 S(1)NGDLSPK;S(0.997)NGDLS(0.003)PK 115.29 0.009917 50171000 304910 281749 251110 251881 216338 174552 322690 237954 198566 279534 TRUE FALSE 328254.144 267757.7544 259481.8821 231301.5166 207843.4831 181194.6987 280320.4154 269055.4048 215836.9118 270412.8285 1.213900043 0.990181405 0.95957682 0.855364436 0.768615469 0.670066948 1.036638746 0.99498018 0.798175564 1 18.04480407 -4.6172575 1.282907736 0.872284575 1.463933897 0.459891835 0.109533425 1.895783111 2.094590994 0.034607865 1.633430207 2.41E-05 4.6172575 0.591649322 S(ph)NLDITVGSR ddPTM_A459_MK2206_30min_R2 1 SNLDITVGSR 10 0 P42356;P42356-2 P42356;P42356-2 PI4KA Phosphatidylinositol 4-kinase alpha 1 S(1)NLDITVGSR 96.756 0.021358 4070800 9175 17185 13565 16173 18097 15732 13026 13741 16402 11924 TRUE FALSE 9877.445054 16331.61789 14017.25033 14851.61417 17386.42085 16330.69228 11315.67055 15536.99588 17828.61631 11534.92086 0.856308004 1.415841348 1.215201257 1.287534986 1.507285665 1.415761104 0.980992474 1.346952968 1.545621035 1 13.49372048 -4.7531058 24.96552954 1.309353157 0.856307148 0.349060406 0.182191304 350.3927814 1049615.602 0.044638707 0.497744282 1.77E-05 4.7531058 -0.45304601 S(ph)NLSLAS(ph)LTFQRQASLEQANS(ph)FPR ddPTM_A459_MK2206_30min_R1 1 SNLSLASLTFQRQASLEQANSFPR 24 1 H0YDV5;Q8N699 H0YDV5 MYCT1 Myc target protein 1 3 S(0.625)NLS(0.505)LAS(0.856)LT(0.013)FQRQAS(0.051)LEQANS(0.949)FPR 58.712 0.035531 6915800 1049.4 642.28 368.43 336.35 1366.6 971.87 1156.2 1310.6 514.08 604.3 TRUE FALSE 960.1430194 600.4674553 343.4219981 362.2557353 1312.165428 1026.89644 1079.072008 1299.141562 567.5204557 679.1652462 1.41371047 0.88412571 0.505653079 0.533383793 1.932026757 1.51199792 1.588821003 1.912850473 0.835614688 1 9.407618826 -6.254779901 24.99754882 1.517880098 0.814314135 0.367231947 0.40057653 531.9076565 1996609.682 0.118791224 0.149748473 5.56E-07 6.254779901 -0.703565963 S(ph)NMSPDKPVSVK ddPTM_A459_MK2206_30min_R1 1 SNMSPDKPVSVK 12 1 Q9Y6M7-6;Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-3;Q9Y6M7-8;H7C3C4;Q9Y6M7-5 Q9Y6M7-6 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 S(0.789)NMS(0.014)PDKPVS(0.197)VK 112.02 0.03138 0 1309.3 1325.5 895.79 1054.9 897.02 1015.7 1256.1 1355.7 1538.5 1479.5 TRUE FALSE 1197.93716 1239.209709 834.9862706 1136.148581 861.2897939 1073.208056 1172.307861 1343.847258 1698.432581 1662.79163 0.720437329 0.745258568 0.502159294 0.683277784 0.517978187 0.645425462 0.705023913 0.808187408 1.021434406 1 10.69939168 -7.982346232 1.74577862 1.020722546 0.633448522 0.79154927 0.075139668 0.164859555 0.909441539 0.065932272 0.022160897 1.04E-08 7.982346232 -0.387274024 S(ph)NMSVAR ddPTM_A459_MK2206_30min_R2 1 SNMSVAR 7 0 P53355-4;P53355;P53355-3 P53355-4 DAPK1 Death-associated protein kinase 1 1 S(0.999)NMS(0.001)VAR 86.882 0.034321 6473700 9096.9 11621 10410 13397 15870 15077 13004 10671 13589 10857 TRUE FALSE 9793.365658 11043.91804 10757.0642 12302.42225 15246.86406 15650.7658 11296.55918 12065.73634 14770.94666 10502.73698 0.932458432 1.051527622 1.024215328 1.171353931 1.451703883 1.490160692 1.075582413 1.14881829 1.406390228 1 13.35847772 -5.872030707 3.565309239 1.274291845 1.005238366 0.360450648 0.153297411 0.258270428 6.328984326 0.04593674 0.072367212 1.34E-06 5.872030707 -0.26905348 S(ph)NPEGAEDR ddPTM_A459_MK2206_30min_R2 2 SNPEGAEDR 9 0 M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R3H9;M0R2I2 M0QXG9 BABAM1 BRISC and BRCA1-A complex member 1 1 S(1)NPEGAEDR;S(1)NPEGAEDR 98.902 0.019286 12783900 3788.6 4714.9 4431.4 6534.3 5512.8 5616.9 6263.4 7609.5 7959.3 7454.5 TRUE FALSE 4078.658129 4480.764922 4579.140664 6000.426788 5296.339772 5830.655065 5441.008056 8604.087777 8651.585527 7211.260275 0.565595745 0.621356705 0.634998667 0.832091279 0.734454113 0.808548692 0.754515556 1.193146198 1.199732806 1 12.8160357 -7.721801658 5.757842734 1.148342964 0.708359996 0.811720787 0.093471293 0.076377988 6.324964405 0.049743758 0.027346192 1.90E-08 7.721801658 -0.439982968 S(ph)NSDESNFSEK ddPTM_A459_MK2206_30min_R1 1 SNSDESNFSEK 11 0 O95999;A0A087WWW9 O95999 BCL10 B-cell lymphoma/leukemia 10 1 S(0.956)NS(0.044)DESNFSEK 211.83 1.94E-05 6178900 2426.9 2010 2368.9 1937.6 2023.1 1820.4 2325.2 2374.2 2134.4 2186.7 TRUE FALSE 2220.479411 1879.148635 2208.105668 2086.834288 1942.515643 1923.469475 2170.090151 2353.44262 2356.278518 2457.604905 0.903513582 0.764626011 0.898478703 0.849133351 0.790410061 0.782660171 0.883010181 0.957616342 0.95877027 1 11.26303729 -7.660210483 2.919419632 0.972603685 0.830345022 0.666250746 0.044481406 0.159076026 2.708484605 0.024981126 0.012533502 2.19E-08 7.660210483 -0.142258663 S(ph)NSDNNLNASAPDWAVCSTATSHR ddPTM_A459_MK2206_30min_R1 2 SNSDNNLNASAPDWAVCSTATSHR 24 0 Q9UPX8;Q9UPX8-3;A0A2R8Y2H5;A0A087X158 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.747)NS(0.253)DNNLNASAPDWAVCSTATSHR;S(0.763)NS(0.237)DNNLNASAPDWAVCSTATSHR 191.5 1.16E-26 20657700 1365.93 706.94 1121.93 1094.8 1369.03 1348.56 1390.71 1100.27 866.18 1002.6 TRUE FALSE 1249.750481 660.9180775 1045.776517 1179.121686 1314.498636 1424.914302 1297.938273 1090.650455 956.2225107 1126.809657 1.109105227 0.586539238 0.928086222 1.046424902 1.166566711 1.264556345 1.15187003 0.967910107 0.848610504 1 10.13802812 -5.667473545 3.690398019 1.079711738 0.830448114 0.226076313 0.160882943 0.28980639 7.55359549 0.04610095 0.08349454 2.15E-06 5.667473545 -0.249263624 S(ph)NSDNNLNASAPDWAVCSTATSHR ddPTM_A459_MK2206_30min_R2 3 SNSDNNLNASAPDWAVCSTATSHR 24 0 Q9UPX8;Q9UPX8-3;A0A2R8Y2H5;A0A087X158 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.574)NS(0.426)DNNLNASAPDWAVCSTATSHR;S(0.5)NS(0.5)DNNLNASAPDWAVCSTATSHR;S(0.745)NS(0.255)DNNLNASAPDWAVCSTATSHR 204.5 1.95E-31 104969400 17785 18020.7 16888 29787.6 23121.7 28531.8 26135.9 22147.1 25150.8 17528.7 TRUE FALSE 19146.63327 17125.81824 17451.03749 27353.85779 22213.82588 29617.59764 22704.22494 25041.80201 27338.37112 16956.73995 1.129145893 1.009971155 1.029150505 1.613155469 1.310029283 1.746656357 1.33894988 1.476805216 1.612242164 1 14.04957121 -5.750551224 24.99902412 1.465248159 1.051477227 0.444377665 0.196865873 171.9385772 394764.494 0.049500153 0.084679873 1.78E-06 5.750551224 -0.413770932 S(ph)NSELEDEILCLEK ddPTM_A459_MK2206_30min_R1 2 SNSELEDEILCLEK 14 0 G3V599;Q96PC5-6;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-14;Q96PC5-7;Q96PC5-12;Q96PC5;Q96PC5-5;Q96PC5-8;G3V5K6;Q86UF2;A4D2H0;A0A5F9ZHA4;A0A2R8YE69;Q8IX94;P0CG41;A4FU28 G3V599;A0A5F9ZHA4 MIA2;CTAGE5;CTAGE6;CTAGE15;CTAGE4;CTAGE8;CTAGE9 Melanoma inhibitory activity protein 2;cTAGE family member 6;cTAGE family member 15;cTAGE family member 4;cTAGE family member 8;cTAGE family member 9 1 S(0.997)NS(0.003)ELEDEILCLEK;S(0.999)NS(0.001)ELEDEILCLEK 240.13 1.58E-19 8517200 2128.8 2429 2474.2 2059.69 2653.7 2005.89 2209.58 1871.05 2330.7 2073.12 TRUE FALSE 1947.734381 2270.871659 2306.258198 2218.327681 2547.99751 2119.461758 2062.18295 1854.691607 2572.984605 2329.953757 0.835954094 0.974642373 0.98983003 0.952090862 1.093582867 0.909658293 0.885074626 0.79602078 1.104307155 1 11.18608561 -5.548997695 0.004381088 1.889523691 1.36E-07 0.029252798 0.094253458 217193.6123 194.8882464 41018.30742 43046.65472 2.82E-06 5.548997695 -1.889523556 S(ph)NSELEDEILCLEK ddPTM_A459_MK2206_30min_R2 1 SNSELEDEILCLEK 14 0 G3V599;Q96PC5-6;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-14;Q96PC5-7;Q96PC5-12;Q96PC5;Q96PC5-5;Q96PC5-8;G3V5K6;Q86UF2;A4D2H0;A0A5F9ZHA4;A0A2R8YE69;Q8IX94;P0CG41;A4FU28 G3V599;A0A5F9ZHA4 MIA2;CTAGE5;CTAGE6;CTAGE15;CTAGE4;CTAGE8;CTAGE9 Melanoma inhibitory activity protein 2;cTAGE family member 6;cTAGE family member 15;cTAGE family member 4;cTAGE family member 8;cTAGE family member 9 1 S(0.883)NS(0.117)ELEDEILCLEK 103.39 0.0069195 907570 3398.4 2806.5 2739.7 3262.1 4072.6 3439.7 2898.3 3094.4 2402.5 4063.2 TRUE FALSE 3658.584117 2667.133291 2831.040231 2995.575995 3912.689261 3570.600194 2517.749729 3498.848705 2611.465107 3930.618117 0.930791038 0.678553147 0.720253188 0.762113211 0.995438668 0.908406792 0.640548039 0.890152287 0.664390442 1 11.94054049 -11.6451057 2.483241265 1.404232365 0.799041346 0.204461437 0.118967036 16468476.82 5930116.779 37414866.13 0.030509334 2.26E-12 11.6451057 -0.605191019 S(ph)NSFNNPLGNR ddPTM_A459_MK2206_30min_R1 1 SNSFNNPLGNR 11 0 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 S(0.949)NS(0.051)FNNPLGNR 117.53 0.0055732 9334600 1112.2 1160.2 1158.4 1057.5 1165.1 1161.9 1110.8 1093.3 1098.6 1081.4 TRUE FALSE 1017.60155 1084.670769 1079.771035 1138.948833 1118.6916 1227.685774 1036.700559 1083.741393 1212.803401 1215.371996 0.837275791 0.892459899 0.888428431 0.93711953 0.920452013 1.010131694 0.852990329 0.891695215 0.997886577 1 10.24718224 -1.522878745 0.172916734 0.981792213 0.473726076 0.386046431 0.046151417 74.92812429 0.820896636 0.120079316 9.890735533 0.03 1.522878745 -0.508066137 S(ph)NSFNNPLGNR ddPTM_A459_MK2206_30min_R2 2 SNSFNNPLGNR 11 0 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 S(0.677)NS(0.323)FNNPLGNR;S(0.765)NS(0.235)FNNPLGNR 143.55 0.00083027 40404000 42224 64382 60797 69906 69789 62072 82600 48266 68599 77041 TRUE FALSE 45456.7019 61184.8835 62823.94164 64194.45618 67048.7332 64434.19346 71754.52078 54574.53192 74565.61702 74527.15848 0.609934725 0.820974323 0.842967086 0.861356551 0.899655033 0.864573328 0.962796949 0.732277106 1.000516034 1 16.18547863 -4.192236914 1.072256859 0.892977292 2.44E-17 0.571238547 0.075277287 3.821835461 1.488279676 0.02168492 5.273198772 6.42E-05 4.192236914 -0.892977292 S(ph)NSFSDER ddPTM_A459_MK2206_30min_R1 1 SNSFSDER 8 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.999)NSFSDER 105.13 0.012605 0 2690.4 3206.7 2725.7 1746.3 1648.3 1811.8 2039.3 1588.8 2212.8 2856.1 TRUE FALSE 2461.567352 2997.943247 2540.687078 1880.800329 1582.644721 1914.38255 1903.262018 1574.909289 2442.828479 3209.93523 0.766858885 0.933957551 0.791507272 0.585930928 0.493045687 0.59639289 0.59292848 0.490635847 0.761021112 1 11.64832847 -5.655117276 4.492143931 0.614127957 0.852610392 0.235278129 0.147153108 0.232614315 8.056588071 0.038052832 0.067689036 2.21E-06 5.655117276 0.238482436 S(ph)NSFSDER ddPTM_A459_MK2206_30min_R2 1 SNSFSDER 8 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.783)NS(0.024)FS(0.193)DER 126.71 0.0047673 22148000 101170 88411 80547 90553 72756 65910 68576 59103 53947 71746 TRUE FALSE 108915.653 84020.6383 83232.39678 83154.53024 69899.23387 68418.25124 59571.88883 66827.96503 58639.21255 69404.9339 1.569278247 1.210585957 1.199228817 1.198106901 1.007121972 0.985783681 0.858323544 0.962870523 0.84488536 1 16.08275061 -1.522883951 0.354574766 0.892054409 8.709381714 0.87150416 0.073742964 20.45248635 0.286859035 0.061659721 107.3571506 0.02999964 1.522883951 7.817327304 S(ph)NSFSDEREFSGPSTPTGTLEFEGGEVSLEGGK ddPTM_A459_MK2206_30min_R1 1 SNSFSDEREFSGPSTPTGTLEFEGGEVSLEGGK 33 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.525)NS(0.399)FS(0.072)DEREFS(0.002)GPS(0.001)T(0.001)PTGTLEFEGGEVSLEGGK 72.838 1.69E-05 21062000 3832 4187.4 4270.4 5238.4 4642.7 4368.4 4155.7 5573.3 2709 1900.9 TRUE FALSE 3506.068277 3914.799499 3980.537146 5641.862476 4457.771428 4615.735033 3878.480836 5524.573226 2990.610244 2136.397843 1.641112066 1.83243 1.863200321 2.640829513 2.086583003 2.16052223 1.815430046 2.585929041 1.399837701 1 11.06096462 -8.483568445 5.935874712 1.001133527 2.07399864 0.580256711 0.308146764 0.116896567 11.1132701 0.299640135 0.077685829 3.28E-09 8.483568445 1.072865113 S(ph)NSGRELTDEEILASVMIK ddPTM_A459_MK2206_30min_R1 2 SNSGRELTDEEILASVMIK 19 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 S(0.513)NS(0.484)GRELT(0.002)DEEILASVMIK;S(0.624)NS(0.373)GRELT(0.003)DEEILASVMIK 121.92 0.00023353 27317000 4530.6 4582.2 4547.1 3974.6 4906 4065.8 3732.1 4786.9 3133.4 2099.1 TRUE FALSE 4145.248679 4283.897947 4238.455521 4280.724381 4710.583631 4296.002082 3483.138419 4745.048638 3459.128143 2359.152355 1.757092402 1.815863201 1.796601017 1.814517986 1.996727181 1.820993914 1.476436403 2.011336244 1.466258902 1 11.20405288 -8.552401526 4.508399215 1.000395489 1.804756048 0.770496485 0.138280441 0.086647148 6.353685818 0.131313288 0.034256342 2.80E-09 8.552401526 0.804360559 S(ph)NSGRELTDEEILASVMIK ddPTM_A459_MK2206_30min_R2 1 SNSGRELTDEEILASVMIK 19 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 S(0.602)NS(0.398)GRELTDEEILASVMIK 114.21 0.00027418 5006000 13278 31358 23791 29234 30235 26079 28074 19784 31610 24278 TRUE FALSE 14294.57389 29800.80732 24584.18007 26845.48869 29047.82198 27071.45462 24387.85008 22369.83673 34359.38066 23485.81085 0.608647237 1.268885605 1.046767353 1.143051388 1.236824318 1.152672769 1.038407838 0.952483049 1.462984646 1 14.51950178 -4.752830164 24.99797376 1.139888678 0.608646235 0.558496087 0.142919876 240.7069038 698871.0922 0.033774739 0.386903951 1.77E-05 4.752830164 -0.531242442 S(ph)NSLPHPAGGGK ddPTM_A459_MK2206_30min_R2 1 SNSLPHPAGGGK 12 0 G5E9A7;Q09019 G5E9A7 DMWD Dystrophia myotonica WD repeat-containing protein 1 S(0.634)NS(0.366)LPHPAGGGK 73.415 0.035914 22183000 100360 117010 108180 125740 103850 96914 119570 94139 95283 113120 TRUE FALSE 108043.6388 111199.4535 111786.6672 115466.6398 99772.3272 100602.1302 103870.3154 106443.2905 103570.5431 109428.9037 0.98734096 1.016179911 1.021546077 1.055174967 0.911754791 0.919337824 0.949203655 0.972716412 0.946464231 1 16.73963432 -6.26146602 25 0.946984431 1.019889409 0.601052174 0.027936398 1.655922722 1553963.111 0.008674613 0.010502591 5.48E-07 6.26146602 0.072904978 S(ph)NSLPHSAVSNAGSK ddPTM_A459_MK2206_30min_R1 1 SNSLPHSAVSNAGSK 15 0 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 S(0.741)NS(0.259)LPHSAVSNAGSK 97.621 0.006224 26685000 7183.8 4579.9 5284.2 4383.8 6699.8 5939.9 6871.4 7388.6 5272 5162.7 TRUE FALSE 6572.780086 4281.747678 4925.523227 4721.441036 6432.932779 6276.212005 6413.021444 7324.002249 5820.043266 5802.294252 1.132789859 0.737940458 0.848892354 0.813719682 1.108687788 1.081677649 1.105256156 1.262259708 1.003058965 1 12.50240775 -6.269816523 24.45675428 1.106600731 0.87048999 0.432249446 0.117047677 385.0617326 1124171.02 0.034924735 0.040260031 5.37E-07 6.269816523 -0.236110741 S(ph)NSLPHSAVSNAGSK ddPTM_A459_MK2206_30min_R2 2 SNSLPHSAVSNAGSK 15 0 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 S(0.494)NS(0.494)LPHS(0.013)AVSNAGSK;S(0.903)NS(0.096)LPHSAVSNAGSK 94.339 0.0076363 46369000 126943 171321 143954 169236 164510 155438 207474 154588 176465 165630 TRUE FALSE 136661.8537 162813.4483 148753.3545 155408.8774 158050.5108 161353.302 180232.4146 174793.1824 191813.6067 160225.5067 0.852934446 1.01615187 0.928399963 0.969938437 0.986425408 1.0070388 1.124867185 1.090919829 1.197147762 1 17.28974431 -6.996063996 1.616891873 1.114157726 0.948213401 0.58358667 0.060485474 0.254688479 1.347387646 0.02759886 0.020791034 1.01E-07 6.996063996 -0.165944325 S(ph)NSLVSTFTMEK ddPTM_A459_MK2206_30min_R2 2 SNSLVSTFTMEK 12 0 Q9HB21 Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 1 S(0.752)NS(0.207)LVS(0.031)T(0.01)FTMEK;S(0.491)NS(0.28)LVS(0.059)T(0.17)FTMEK 127.71 0.0025541 33146000 89567 103206 105969 105234 88350 86503 91156 73006 74122 99160 TRUE FALSE 96424.31839 98080.94012 109501.9536 96636.04557 84880.93508 89794.93228 79187.1077 82548.13487 80568.99758 95924.41732 1.005211406 1.022481479 1.14154411 1.007418635 0.884873085 0.936100888 0.82551565 0.860553936 0.839921678 1 16.54961048 -6.177667004 3.564760204 0.882251235 1.055678436 0.629063648 0.058029281 0.149606929 3.634505211 0.01771331 0.023220503 6.64E-07 6.177667004 0.1734272 S(ph)NSPGTASSGSSR ddPTM_A459_MK2206_30min_R2 1 SNSPGTASSGSSR 13 0 H0YAP0;Q96GY0 H0YAP0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A 1 S(0.484)NS(0.484)PGT(0.032)ASSGSSR 163.34 0.00036306 14058000 21947 11201 9615.2 19636 20292 14055 24918 36231 18753 19131 TRUE FALSE 23627.27919 10644.77463 9935.765969 18031.67599 19495.23412 14589.87287 21646.23667 40966.5161 20384.10204 18506.75704 1.276683924 0.57518314 0.536872341 0.974329319 1.053411685 0.788353834 1.169639642 2.21359777 1.101441058 1 14.17576449 -7.525822098 24.98071321 1.532835438 0.863012153 0.320616432 0.367152077 89.0692532 755918.4334 0.164930326 0.095890691 2.98E-08 7.525822098 -0.669823285 S(ph)NSPPALGPEACPVSLPSPPEASTLK ddPTM_A459_MK2206_30min_R2 1 SNSPPALGPEACPVSLPSPPEASTLK 26 0 Q9H0F6;Q9H0F6-2 Q9H0F6 SHARPIN Sharpin 1 S(0.84)NS(0.16)PPALGPEACPVSLPSPPEASTLK 114.51 5.42E-09 2861100 32570 36962 32612 31376 29867 29592 39193 31972 30711 35496 TRUE FALSE 35063.58424 35126.52083 33699.2678 28812.48043 28694.27151 30718.1443 34046.91202 36150.85018 33382.18727 34337.76843 1.021137536 1.022970404 0.981405296 0.839090068 0.835647534 0.894587671 0.991529548 1.052801386 0.972171134 1 15.06750866 -10.34608416 10.8109523 0.999999931 0.954472166 0.030242234 0.072273983 0 0 0.080538767 0.01953352 4.51E-11 10.34608416 -0.045527765 S(ph)NSTSSMSSGLPEQDR ddPTM_A459_MK2206_30min_R1 1 SNSTSSMSSGLPEQDR 16 0 P42684-2;P42684-6;P42684-3;P42684 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 S(0.732)NS(0.236)T(0.009)S(0.019)S(0.001)MS(0.001)S(0.002)GLPEQDR 161.75 4.44E-05 6057200 636.38 427.13 675.67 468.27 661.26 534.41 729.31 533.03 384.49 401.61 TRUE FALSE 582.2525392 399.3237594 629.8074029 504.3362365 634.920614 564.6678324 680.6590606 528.3697749 424.4591114 451.3644788 1.289983077 0.884703556 1.395341088 1.117359164 1.40666943 1.251024081 1.508003161 1.170605574 0.940391039 1 8.818149076 -8.132674645 4.549593263 0.974830668 1.259208003 0.333887823 0.163396565 0.267563628 8.419435836 0.119512167 0.04219616 7.37E-09 8.132674645 0.284377335 S(ph)NSTTQVSQPR ddPTM_A459_MK2206_30min_R2 1 SNSTTQVSQPR 11 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 S(0.533)NS(0.452)T(0.014)TQVSQPR 109.07 0.0096059 3554800 8028.2 8809.9 8353.5 7441.4 8687.4 11412 8001.7 8161.3 9823.7 8462.8 TRUE FALSE 8642.845165 8372.413177 8632.001521 6833.413816 8346.289025 11846.29166 6951.067178 9228.009932 10678.14767 8186.659529 1.05572305 1.022689798 1.054398499 0.834701112 1.019498734 1.447023858 0.849072464 1.127200893 1.304335136 1 12.99905918 -6.547926093 24.99891194 1.145871813 0.989613882 0.176215861 0.160990581 399.3122084 398537.1875 0.052386821 0.052388622 2.83E-07 6.547926093 -0.15625793 S(ph)NTLDIMDGR ddPTM_A459_MK2206_30min_R1 1 SNTLDIMDGR 10 0 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915 H0Y9X0 FRYL Protein furry homolog-like 1 S(0.719)NT(0.281)LDIMDGR 142.39 0.0012043 17271000 4799 4121.1 4217.7 3370.2 3598.6 3135.2 4371.7 4718.4 4616.2 4283.6 TRUE FALSE 4390.819849 3852.815641 3931.414275 3629.773388 3455.260142 3312.712315 4080.07187 4677.147526 5096.070509 4814.284708 0.912039922 0.800288283 0.816614412 0.753959022 0.717709972 0.688100625 0.84749285 0.971514526 1.058531188 1 12.23310575 -7.743298814 2.844786153 1.024423194 0.779166232 0.750539401 0.059242212 0.137005882 2.241130648 0.038685704 0.017929726 1.81E-08 7.743298814 -0.245256962 S(ph)NTLDIMDGR ddPTM_A459_MK2206_30min_R2 1 SNTLDIMDGR 10 0 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915 H0Y9X0 FRYL Protein furry homolog-like 1 S(0.938)NT(0.062)LDIMDGR 115.12 0.0067477 3734300 21551 23216 17425 34131 25643 51566 21124 21790 30458 21183 TRUE FALSE 23200.96113 22063.1272 18005.9408 31342.38812 24636.12697 53528.38026 18350.39343 24638.02782 33107.18178 20491.80044 1.13220706 1.076680756 0.878690033 1.529508752 1.202243163 2.612185318 0.895499323 1.202335924 1.615630695 1 14.32275913 -5.768658611 24.98174335 1.461853091 1.033941416 0.143476629 0.453418834 304.2625329 1052886.274 0.127416183 0.193467677 1.70E-06 5.768658611 -0.427911675 S(ph)NTPILVDGK ddPTM_A459_MK2206_30min_R1 1 SNTPILVDGK 10 0 P06744-2;P06744;A0A2U3TZU2;K7EQ48;A0A0J9YXP8;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;K7EPY4;K7ERC6;K7EP41 P06744-2 GPI Glucose-6-phosphate isomerase 1 S(0.718)NT(0.282)PILVDGK 137.09 0.0017841 29841000 6193.6 7317.5 7580.3 5767.2 4387.6 4761.2 6398.1 5438 8012.5 8584.4 TRUE FALSE 5666.801796 6841.12942 7065.770356 6211.390743 4212.832601 5030.775029 5971.294423 5390.456139 8845.428048 9647.900281 0.587361149 0.709079615 0.732363535 0.643807519 0.436657975 0.521437295 0.618921656 0.558718061 0.916824158 1 13.23599928 -8.347677616 4.224174454 0.991150846 0.60277031 0.7520042 0.082462761 0.122060987 3.726902472 0.088654346 0.023559993 4.49E-09 8.347677616 -0.388380536 S(ph)NVCINGNHVYLEQPEAK ddPTM_A459_MK2206_30min_R1 2 SNVCINGNHVYLEQPEAK 18 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 S(0.999)NVCINGNHVY(0.001)LEQPEAK;S(1)NVCINGNHVYLEQPEAK 72.676 0.012791 12034800 5413.1 5145.6 4809.4 4792.8 4456.1 4199 5485.5 5644.5 4708.6 5309.6 TRUE FALSE 4952.68742 4810.620505 4482.951328 5161.942286 4278.604101 4436.743751 5119.572304 5595.150732 5198.07582 5967.393333 0.829958265 0.806151067 0.751241133 0.865024643 0.716997165 0.743497789 0.857924393 0.937620569 0.871079805 1 12.54288516 -7.535730909 3.728374304 0.927016659 0.785646929 0.643780319 0.050137627 0.150435332 4.596564856 0.024557693 0.014154424 2.91E-08 7.535730909 -0.14136973 S(ph)NVCINGNHVYLEQPEAK ddPTM_A459_MK2206_30min_R2 1 SNVCINGNHVYLEQPEAK 18 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 S(1)NVCINGNHVYLEQPEAK 119.34 0.0006465 8248300 190280 178330 193370 142720 153400 136690 168350 117790 129410 196930 TRUE FALSE 204847.9831 169474.3915 199816.8593 131059.3195 147376.7452 141891.8337 146245.4428 133185.5574 140665.8479 190504.1902 1.075293844 0.889609784 1.048884327 0.687960298 0.773614192 0.744822639 0.767675727 0.699121407 0.738387159 1 17.53946321 -5.759146089 24.99999939 0.759165752 0.993097395 0.556866351 0.093900753 40.29970337 439309.3007 0.023820904 0.038860785 1.74E-06 5.759146089 0.233931643 S(ph)PAAPGQSPTGSVCYER ddPTM_A459_MK2206_30min_R1 2 SPAAPGQSPTGSVCYER 17 0 O75534;O75534-4 O75534 CSDE1 Cold shock domain-containing protein E1 1 S(0.785)PAAPGQS(0.144)PT(0.067)GS(0.004)VCYER;S(0.999)PAAPGQSPTGSVCYER 198.55 6.68E-08 12835000 1146.78 1190.71 1312.84 1127 1570.26 1220.47 1402.65 1282.74 1171.7 1033.25 TRUE FALSE 1049.240339 1113.194563 1223.728079 1213.801735 1507.713219 1289.571957 1309.081778 1271.525139 1293.502408 1161.256811 0.903538588 0.95861187 1.053796255 1.045248324 1.298346072 1.110496787 1.127297395 1.094956023 1.11388144 1 10.18147134 -5.362238397 1.550345259 1.126638746 0.904031516 0.506772254 0.072136136 0.377631842 1.582497148 0.021754745 0.090431678 4.34E-06 5.362238397 -0.22260723 S(ph)PAAPGQSPTGSVCYER ddPTM_A459_MK2206_30min_R2 2 SPAAPGQSPTGSVCYER 17 0 O75534;O75534-4 O75534 CSDE1 Cold shock domain-containing protein E1 1 S(1)PAAPGQSPTGSVCYER;S(0.998)PAAPGQS(0.001)PTGS(0.001)VCYER 150.9 0.00023692 24838000 12563.8 13580.8 12704.7 12953.7 11638.7 6446.2 13224 8755.2 7744 9731.2 TRUE FALSE 13525.69419 12906.39722 13128.26836 11895.34127 11181.70616 6691.514658 11487.67292 9899.534701 8417.559122 9413.671741 1.436813877 1.371026904 1.394595936 1.263623972 1.187815601 0.710829402 1.220317983 1.051612482 0.894184475 1 13.20054183 -6.299417722 2.279169192 0.993516949 1.387348138 0.668012447 0.128919048 0.189758845 1.93637714 0.043202674 0.053850565 5.02E-07 6.299417722 0.393831189 S(ph)PACSSLTPSLCK ddPTM_A459_MK2206_30min_R1 1 SPACSSLTPSLCK 13 0 Q96R06;J3KSV2;J3QRV8;F5GZT2 Q96R06 SPAG5 Sperm-associated antigen 5 1 S(1)PACSSLTPSLCK 170.26 0.00023238 11422000 2104.8 2083.3 1898.9 1610.6 2169.2 1663.6 2082.5 1627.7 1636.1 1477.3 TRUE FALSE 1925.775707 1947.676791 1770.007959 1734.648691 2082.796171 1757.791594 1943.580225 1613.469191 1806.17845 1660.319077 1.159882901 1.173073789 1.066064941 1.044768271 1.254455363 1.0587071 1.170606452 0.971782601 1.087850206 1 10.69724481 -7.758213817 24.99988224 1.022362299 1.12999023 0.378344346 0.066082212 89.83112 696258.8978 0.031879386 0.017411519 1.74E-08 7.758213817 0.107627931 S(ph)PACSSLTPSLCK ddPTM_A459_MK2206_30min_R2 2 SPACSSLTPSLCK 13 0 Q96R06;J3KSV2;J3QRV8;F5GZT2 Q96R06 SPAG5 Sperm-associated antigen 5 1 S(1)PACSSLTPSLCK;S(1)PACSSLTPSLCK 190.57 0.00016479 24126000 62472 65056 64763 67577 68925 62178 68648 49860 54535 79056 TRUE FALSE 67254.90435 61825.41364 66922.1661 62055.74293 66218.65818 64544.22736 59634.43514 56376.87319 59278.35572 76476.40919 0.879420269 0.808424641 0.875069408 0.81143641 0.865870389 0.843975653 0.779775564 0.73717992 0.775119496 1 16.22272717 -7.227070958 14.62736692 0.801118347 0.846065434 0 0.070526497 11.79133062 5016.779642 0.025318765 0.019586499 5.93E-08 7.227070958 0.044947086 S(ph)PAFALK ddPTM_A459_MK2206_30min_R2 1 SPAFALK 7 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 S(1)PAFALK 83.614 0.038965 24445000 57066 60995 52984 57558 54569 56694 59129 47020 46973 54041 TRUE FALSE 61435.01684 57966.077 54750.46012 52855.32728 52426.34687 58851.5299 51365.29127 53165.67544 51058.62663 52277.6466 1.175167989 1.108811907 1.047301546 1.011050243 1.002844433 1.125749412 0.982547888 1.016986779 0.976681813 1 15.67390658 -4.992302705 1.479714587 1.019220282 1.203694709 0.633276954 0.039174616 0.519674744 1.415340567 0.011650641 0.126296148 1.02E-05 4.992302705 0.184474427 S(ph)PAFTSR ddPTM_A459_MK2206_30min_R2 2 SPAFTSR 7 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 S(1)PAFTSR;S(1)PAFTSR 95.358 0.023842 32242000 21933 21795 19212 27560 20825.7 21754 23722 19031.9 22463 22601 TRUE FALSE 23612.20734 20712.69199 19852.51849 25308.25984 20007.97838 22581.86371 20607.2729 21519.43468 24416.79114 21863.53122 1.079981413 0.94736261 0.908019765 1.157555913 0.915130231 1.032855282 0.942540923 0.984261621 1.11678168 1 14.41623881 -8.226521717 24.61755193 1.05839093 0.993552926 0.092087624 0.078114442 1004.190421 707972.9128 0.050166181 0.018959815 5.94E-09 8.226521717 -0.064838004 S(ph)PAGGESATVAAK ddPTM_A459_MK2206_30min_R1 3 SPAGGESATVAAK 13 0 Q147X3 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 S(1)PAGGESATVAAK;S(1)PAGGESATVAAK;S(1)PAGGESATVAAK 171.36 0.00020382 69741000 5358.8 5220.6 4751.3 3626.2 4770.4 4251.84 5827.8 4922.8 5664.8 7239.3 TRUE FALSE 4903.00592 4880.737991 4428.794994 3905.490552 4580.384867 4492.575506 5439.038095 4879.760479 6253.676232 8136.159138 0.602619226 0.599882317 0.544334854 0.48001649 0.562966479 0.552173996 0.668501931 0.599762172 0.768627571 1 12.99013218 -8.65947094 0.846898236 1.002416889 0.556393491 0.906657623 0.043199769 0.225856468 0.344628837 0.043735353 0.015353308 2.19E-09 8.65947094 -0.446023399 S(ph)PAGGESATVAAK ddPTM_A459_MK2206_30min_R2 3 SPAGGESATVAAK 13 0 Q147X3 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 S(1)PAGGESATVAAK;S(1)PAGGESATVAAK;S(1)PAGGESATVAAK 190.57 0.0001012 163595000 161371 106493 121506 128236 97238 88816 124334 100450 71380 136485 TRUE FALSE 173725.6878 101204.7125 125556.9494 117758.7086 93419.94754 92195.95512 108008.7964 113579.1599 77588.50337 132031.5056 1.315789644 0.766519415 0.950962036 0.891898551 0.707557996 0.698287539 0.818053206 0.860242859 0.587651432 1 17.0105227 -2.943591216 1.636681364 0.798718799 199.977946 0.596452417 0.122308465 364.3338923 3.303843166 0.033086762 270467.5405 0.001138699 2.943591216 199.1792272 S(ph)PAGPAATPAQAQAAST(ph)PR ddPTM_A459_MK2206_30min_R2 1 SPAGPAATPAQAQAASTPR 19 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 2 S(1)PAGPAAT(0.029)PAQAQAAS(0.255)T(0.716)PR 157.63 0.0004723 3102300 10515 10612 9797.8 8087.7 9062.6 7881.5 9270.4 9312.5 7626.4 8417.3 TRUE FALSE 11320.03648 10085.02351 10124.45376 7426.909039 8706.756788 8181.436005 8053.185344 10529.67572 8289.730487 8142.64419 1.390216276 1.23854405 1.243386488 0.912100402 1.069278797 1.004764032 0.989013539 1.29315189 1.018063702 1 12.99128165 -5.605738122 6.514282516 1.051002134 1.296795456 0.57003726 0.100117664 0.159459652 10.08581626 0.027890001 0.048762968 2.48E-06 5.605738122 0.245793322 S(ph)PAGPAATPAQAQAASTPR ddPTM_A459_MK2206_30min_R2 2 SPAGPAATPAQAQAASTPR 19 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 S(1)PAGPAATPAQAQAASTPR;S(1)PAGPAATPAQAQAASTPR 237.09 1.25E-29 18246200 3133.22 3301.3 1509.9 2955.44 3386.5 1611.2 2454 1208.2 0 1103.4 TRUE FALSE 3373.101732 3137.362243 1560.239312 2713.971098 3253.528994 1672.515345 2131.786852 1366.115888 0 1067.396148 3.160121701 2.93926697 1.461724698 2.542609042 3.04809887 1.566911542 1.997184321 1.279858364 0 1 10.05988 -7.642275597 1.180290256 0.515728901 2.536677194 0.647950014 0.578804544 0.318567576 0.816037797 0.481013271 0.203429189 2.28E-08 7.642275597 2.020948293 S(ph)PAGSPELR ddPTM_A459_MK2206_30min_R1 1 SPAGSPELR 9 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 S(0.982)PAGS(0.018)PELR 93.667 0.027483 0 1338.6 1497.6 1486.3 1149.5 1481.3 1273.7 1519.5 1455.4 1059.9 1104.6 TRUE FALSE 1224.745041 1400.105968 1385.414097 1238.034689 1422.296684 1345.815793 1418.136927 1442.675591 1170.080398 1241.446187 0.986547023 1.127802383 1.115967902 0.997251997 1.145677274 1.084070987 1.14232654 1.162092732 0.942513989 1 10.27780601 -8.271953399 24.9436229 0.971256978 1.096610254 0.420011631 0.058248358 728.8387445 1729087.94 0.052929116 0.014219361 5.35E-09 8.271953399 0.125353276 S(ph)PAGSQQQFGYSPGQQQTHPQGSPR ddPTM_A459_MK2206_30min_R2 1 SPAGSQQQFGYSPGQQQTHPQGSPR 25 0 Q8TAP9 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein 1 S(0.516)PAGS(0.478)QQQFGY(0.004)S(0.001)PGQQQTHPQGSPR 73.461 0.0034695 0 1174.4 2690.8 2016.3 4264.8 1133.3 3695.5 1809.7 1295 1221.3 1361.7 TRUE FALSE 1264.312967 2557.178785 2083.522436 3916.352198 1088.800948 3836.134842 1572.084216 1464.260946 1327.526466 1317.267841 0.959799464 1.94127474 1.581699918 2.973087232 0.826560031 2.912190463 1.193443101 1.111589383 1.007787806 1 10.363333 -7.493192253 24.57577575 1.066315932 1.875503861 0.258252743 0.65717012 741.4470049 613804.0845 0.259863927 0.174862242 3.21E-08 7.493192253 0.809187928 S(ph)PAKSPNPSTPR ddPTM_A459_MK2206_30min_R1 1 SPAKSPNPSTPR 12 1 O76021;J3QSV6;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 S(1)PAKSPNPSTPR 111.66 0.031824 7889700 1230.9 1121.6 969.41 1084.9 1113 937.78 885.4 1026.6 690.04 701.27 TRUE FALSE 1126.205491 1048.583636 903.6091501 1168.459186 1068.666853 990.8762932 826.3365815 1017.624544 761.7721273 788.1486219 1.428925281 1.330438964 1.146495883 1.48253661 1.355920474 1.257220105 1.048452739 1.291158185 0.966533603 1 9.622323895 -7.630411682 0.751650718 0.999564698 1.350422705 0.565024654 0.113471587 0.530138008 0.566565739 0.103464274 0.051693002 2.34E-08 7.630411682 0.350858007 S(ph)PALSDANK ddPTM_A459_MK2206_30min_R2 4 SPALSDANK 9 0 P52701-2;P52701;P52701-3;A0A087WWJ1;F8WAX8;F8W7G9 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 S(1)PALSDANK;S(1)PALSDANK;S(1)PALSDANK;S(1)PALSDANK 152.64 0.0010857 284356000 1128880 1022220 989570 990020 987920 806380 1158580 836570 637490 1087500 TRUE FALSE 1215307.921 971458.0412 1022561.77 909132.1991 949129.2969 837067.356 1006457.054 945912.5714 692937.7279 1052014.964 1.155219234 0.923426068 0.972003065 0.864181813 0.902201327 0.795680085 0.956694618 0.899143647 0.658676684 1 20.0047238 -1.522878765 0.770791258 0.864879228 57.55224933 0.449260658 0.091757082 380.7077547 1.504369606 0.03224535 37567.45698 0.029999999 1.522878765 56.6873701 S(ph)PAPGLASGDRPPSVSSVHSEGDCNR ddPTM_A459_MK2206_30min_R2 3 SPAPGLASGDRPPSVSSVHSEGDCNR 26 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 S(0.487)PAPGLAS(0.487)GDRPPS(0.008)VS(0.009)S(0.009)VHS(0.001)EGDCNR;S(0.999)PAPGLAS(0.001)GDRPPSVSSVHSEGDCNR;S(0.548)PAPGLAS(0.452)GDRPPSVSSVHSEGDCNR 93.407 7.63E-06 39388300 47921.9 64184.02 66199.83 83789.3 84702.44 82087.2 79734.5 62353.47 50527 86283.73 TRUE FALSE 51590.83751 60996.7349 68406.89929 76943.44616 81376.59661 85211.08592 69265.26437 70503.28262 54921.74713 83468.29896 0.618089001 0.730777261 0.81955545 0.921828372 0.974940158 1.020879627 0.829839175 0.844671372 0.657995285 1 16.34894075 -5.124878456 1.758163802 0.891459534 0.609309024 0.445558168 0.099351682 0.49521611 2.408452882 0.030026918 0.186281923 7.50E-06 5.124878456 -0.28215051 S(ph)PAPGS(ph)PDEEGGAEAPAAGIR ddPTM_A459_MK2206_30min_R2 1 SPAPGSPDEEGGAEAPAAGIR 21 0 O15061;A0A075B7B1;O15061-2;H0YL34 O15061 SYNM Synemin 2 S(1)PAPGS(1)PDEEGGAEAPAAGIR 118.44 0.020134 0 8856.9 8513.9 5543.3 8394.8 10464 4594.6 9469.8 6054.4 7116.6 8943.5 TRUE FALSE 9534.991074 8091.112106 5728.110855 7708.917986 10053.13078 4769.450723 8226.403885 6845.730868 7735.589004 8651.674327 1.10209778 0.93520766 0.662081192 0.89103192 1.161986733 0.55127488 0.950845302 0.791260814 0.894114678 1 13.07876364 -6.74273192 24.99978634 0.831536858 0.930307436 0.094856877 0.168344449 720.2602933 962520.8195 0.055920565 0.055829508 1.81E-07 6.74273192 0.098770578 S(ph)PAPPADK ddPTM_A459_MK2206_30min_R2 1 SPAPPADK 8 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 S(1)PAPPADK 85.533 0.03514 5168000 62766 38826 38734 39360 38466 29982 39626 35823 29243 47750 TRUE FALSE 67571.41322 36897.9573 40025.37223 36144.16209 36955.63156 31122.98602 34423.0586 40505.1891 31786.50328 46191.92141 1.462840496 0.798796763 0.866501566 0.782477996 0.800045342 0.673775523 0.745218158 0.876889029 0.688139881 1 15.49535294 -4.761389386 9.145020716 0.7947383 1.467243665 0.82531867 0.090915959 0.02950195 35.90247212 0.021394992 0.122374924 1.73E-05 4.761389386 0.672505365 S(ph)PAPPLLHVAALGQK ddPTM_A459_MK2206_30min_R1 1 SPAPPLLHVAALGQK 15 0 Q8N163-2;Q8N163;H0YC69;E5RGU7;E5RFJ3;H0YC58 Q8N163-2 CCAR2 Cell cycle and apoptosis regulator protein 2 1 S(1)PAPPLLHVAALGQK 84.734 0.014185 6141600 3526.9 3164.2 3270.5 2183.8 2820 2309.5 3366.6 2530.6 3328 4117 TRUE FALSE 3226.918635 2958.210005 3048.507572 2351.996654 2707.673429 2440.261894 3142.020257 2508.475231 3673.957509 4627.045042 0.697403765 0.639330281 0.65884545 0.508315055 0.585184152 0.527390996 0.679055472 0.542133307 0.794018099 1 12.17587543 -8.528013128 3.401504845 0.99930717 0.604347391 0.802679845 0.062146919 0.088865031 2.743925305 0.060480903 0.015991781 2.96E-09 8.528013128 -0.394959779 S(ph)PAPPLLHVAALGQK ddPTM_A459_MK2206_30min_R2 2 SPAPPLLHVAALGQK 15 0 Q8N163-2;Q8N163;H0YC69;E5RGU7;E5RFJ3;H0YC58 Q8N163-2 CCAR2 Cell cycle and apoptosis regulator protein 2 1 S(1)PAPPLLHVAALGQK;S(1)PAPPLLHVAALGQK 98.508 0.0058449 9989200 90265 56958 70166 63563 56363 50736 70672 49394 44484 84064 TRUE FALSE 97175.7578 54129.54854 72505.29942 58369.69957 54149.90542 52666.79403 61392.68151 55849.96539 48353.13791 81320.99856 1.194965132 0.665628183 0.891593816 0.717769095 0.665878511 0.647640769 0.754942544 0.686784058 0.594595969 1 16.31134031 -4.756922732 24.99983492 0.726222099 1.194965832 0.581838027 0.116433373 91.97046593 508997.5705 0.027467906 0.213077299 1.75E-05 4.756922732 0.468743732 S(ph)PAPRPPR ddPTM_A459_MK2206_30min_R1 2 SPAPRPPR 8 1 F8VP90;P50281 F8VP90 MMP14 Matrix metalloproteinase-14 1 S(1)PAPRPPR;S(1)PAPRPPR 94.85 0.012298 2518300 1130.94 788.67 965.73 1053.01 598.44 628.85 1015.23 1051.33 219.56 629.38 TRUE FALSE 1034.747614 737.3274397 900.1789383 1134.113013 574.6028676 664.4549436 947.5058591 1042.138333 242.3840477 707.352346 1.462846091 1.042376467 1.272603312 1.603321201 0.812329062 0.939354973 1.33951045 1.473294517 0.342663807 1 9.466285218 -8.25618448 24.99879473 0.671331896 1.228213456 0.40155064 0.278775996 405.5666532 1929399.421 0.200594854 0.070779909 5.54E-09 8.25618448 0.55688156 S(ph)PAPRPPR ddPTM_A459_MK2206_30min_R2 2 SPAPRPPR 8 1 F8VP90;P50281 F8VP90 MMP14 Matrix metalloproteinase-14 1 S(1)PAPRPPR;S(1)PAPRPPR 85.731 0.019173 7710000 11942.7 14098 12945.2 17262.4 16576.5 13755.5 12568 13712.7 13297.5 12951.6 TRUE FALSE 12857.04229 13397.91382 13376.78651 15852.0067 15925.62332 14278.97519 10917.8065 15504.99697 14454.09251 12528.99035 1.02618343 1.069353032 1.067666758 1.265226188 1.27110189 1.139674849 0.871403537 1.237529644 1.153651819 1 13.61298254 -10.57823217 4.644579832 0.999994906 1.124333216 0.090549768 0.116250145 6.47E-06 1.32E-06 0.118694486 0.028786462 2.64E-11 10.57823217 0.12433831 S(ph)PAQSDSTTQR ddPTM_A459_MK2206_30min_R2 2 SPAQSDSTTQR 11 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(1)PAQSDSTTQR;S(1)PAQSDSTTQR 108.32 0.010036 48905000 5853 7817.8 4535.5 12009.7 5704.4 9564.8 9761.2 10249.1 11011 11986 TRUE FALSE 6301.11018 7429.57942 4686.711306 11028.46909 5480.416594 9928.795166 8479.542715 11588.69256 11968.71688 11594.8978 0.543438182 0.640762821 0.404204624 0.951148452 0.472657602 0.85630726 0.731316727 0.99946483 1.032239963 1 13.50120248 -7.37062486 0.762810036 1.050665834 0.586626559 0.556063983 0.1498574 0.485544911 0.543723918 0.121284731 0.069838254 4.26E-08 7.37062486 -0.464039275 S(ph)PARTPPSEEDSAEAER ddPTM_A459_MK2206_30min_R1 2 SPARTPPSEEDSAEAER 17 1 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 S(0.964)PART(0.036)PPSEEDSAEAER;S(0.991)PART(0.009)PPSEEDSAEAER 101.01 0.0022862 24186000 3210.9 4276.2 4107.8 4458 2968 2656.8 3151 3250 3660 3609.6 TRUE FALSE 2937.796094 3997.818603 3828.973981 4801.355932 2849.778275 2807.22572 2940.802539 3221.585593 4040.470097 4056.784499 0.724168635 0.985464868 0.94384456 1.183537339 0.702472186 0.691982954 0.724909726 0.79412293 0.995978489 1 11.98612095 -4.730176894 23.80015868 0.878369009 0.724166838 0.091811548 0.152917294 6737.026567 5128381.252 0.041167161 5.062985839 1.86E-05 4.730176894 -0.154202171 S(ph)PASPLNNQGIPTPAQLTK ddPTM_A459_MK2206_30min_R2 1 SPASPLNNQGIPTPAQLTK 19 0 A0A2U3U043;J3QLL6;J3KSG1;J3QRK1;Q719H9 A0A2U3U043 KCTD1 BTB/POZ domain-containing protein KCTD1 1 S(0.975)PAS(0.025)PLNNQGIPTPAQLTK 86.8 0.0034964 5110300 7921.9 9827.7 12037 13468 11461 10506 9692.7 10793 10379 12406 TRUE FALSE 8528.406755 9339.670709 12438.30757 12367.62132 11010.98355 10905.81319 8420.036847 12203.68216 11281.74666 12001.19324 0.7106299 0.778228508 1.036422573 1.030532637 0.917490731 0.908727405 0.701599973 1.016872399 0.94005208 1 13.55089023 -5.087603928 5.456189981 0.936357288 0.725474438 0.430734018 0.092770246 0.202116362 9.467959738 0.02517331 0.071706298 8.17E-06 5.087603928 -0.21088285 S(ph)PASTQVPCSSTTAEVR ddPTM_A459_MK2206_30min_R2 1 SPASTQVPCSSTTAEVR 17 0 Q4AC94;Q4AC94-2;Q4AC94-4;Q4AC94-1;Q4AC94-3;H7C288;H7BZB4 Q4AC94 C2CD3 C2 domain-containing protein 3 1 S(0.998)PAS(0.002)TQVPCSSTTAEVR 102.36 0.0036141 5444000 4246.6 5064.2 4304.9 3674.9 5192.7 5449.5 6223.1 3260.9 4020.4 6245.6 TRUE FALSE 4571.722961 4812.719192 4448.423217 3374.648915 4988.808507 5656.884541 5405.999495 3687.110826 4370.087125 6041.806583 0.756681449 0.796569557 0.736273688 0.558549644 0.825714699 0.936290241 0.894765402 0.61026628 0.723308015 1 12.56076428 S(ph)PATPACR ddPTM_A459_MK2206_30min_R2 1 SPATPACR 8 0 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 S(0.998)PAT(0.002)PACR 81.95 0.042493 12225000 7873.3 6232.3 2222.9 7621.7 7370 9465.8 7604.2 8786.1 8842 13052 TRUE FALSE 8476.085902 5922.813045 2297.010377 6998.982729 7080.616769 9826.027652 6605.759406 9934.473437 9611.061177 12626.11431 0.671313889 0.469092303 0.181925359 0.554325944 0.560791436 0.778230532 0.523182291 0.786819539 0.761204987 1 13.6241231 -7.904102777 0.440614051 1.000854393 0.435975614 0.561607098 0.140604631 0.754496963 0.386309531 0.166387102 0.120773891 1.25E-08 7.904102777 -0.564878779 S(ph)PCGLTEQYLHK ddPTM_A459_MK2206_30min_R1 4 SPCGLTEQYLHK 12 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 S(1)PCGLTEQYLHK;S(1)PCGLTEQYLHK;S(1)PCGLTEQYLHK;S(1)PCGLTEQYLHK 170.11 0.00021159 43705200 10687.5 11464.5 10014.4 8429.6 9771.4 8854.3 9950.1 8891.6 7995.7 8449.3 TRUE FALSE 9778.472003 10718.15897 9334.65043 9078.849253 9382.184447 9355.622814 9286.346984 8813.861679 8826.881628 9496.063073 1.02973958 1.128695006 0.983002151 0.956064548 0.988007806 0.985210686 0.97791547 0.928159555 0.929530644 1 13.2131138 -5.382807685 5.855997218 0.965953571 1.078292904 0.664692888 0.031592247 0.12172194 5.272930039 0.008266589 0.01752543 4.14E-06 5.382807685 0.112339333 S(ph)PCGLTEQYLHK ddPTM_A459_MK2206_30min_R2 2 SPCGLTEQYLHK 12 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 S(0.541)PCGLT(0.459)EQYLHK;S(1)PCGLTEQYLHK 207.08 6.38E-06 48480000 247821 240266 191474 239233 222071 204327 244177 164530 183966 203355 TRUE FALSE 266794.3663 228334.7398 197857.6476 219686.8986 213351.3767 212102.8072 212116.2666 186034.6359 199967.0301 196719.543 1.356216887 1.160712029 1.005785417 1.116751774 1.084545915 1.078198962 1.078267382 0.945684567 1.016508208 1 17.58578076 S(ph)PCLEPHILK ddPTM_A459_MK2206_30min_R1 2 SPCLEPHILK 10 0 E9PP00;Q9C0D7;Q9C0D7-2 E9PP00 ZC3H12C Probable ribonuclease ZC3H12C 1 S(1)PCLEPHILK;S(1)PCLEPHILK 152.96 0.00040604 8935800 9855.3 10536.8 10536.3 9758.4 11248.5 9111.7 9417.5 10231.2 7049.5 5484.7 TRUE FALSE 9017.054983 9850.852405 9821.125312 10509.99366 10800.44843 9627.59658 8789.275758 10141.7497 7782.320752 6164.186043 1.462813568 1.598078373 1.593255824 1.705009159 1.752128886 1.561860157 1.425861532 1.645269891 1.262505819 1 12.58969469 -8.479429918 2.695871218 1.000504807 1.596991255 0.805867066 0.094716999 0.109305055 1.77532735 0.096946619 0.026199419 3.32E-09 8.479429918 0.596486448 S(ph)PCLEPHILK ddPTM_A459_MK2206_30min_R2 3 SPCLEPHILK 10 0 E9PP00;Q9C0D7;Q9C0D7-2 E9PP00 ZC3H12C Probable ribonuclease ZC3H12C 1 S(1)PCLEPHILK;S(1)PCLEPHILK;S(1)PCLEPHILK 120.57 0.0033379 11903600 59867 111141 100855 115025 122587 125774 115851 96494 119858 92871 TRUE FALSE 64450.46355 105621.8996 104217.4554 105627.0896 117773.6184 130560.4177 100639.6245 109106.0971 130283.0322 89840.62688 0.717386619 1.175658533 1.160025915 1.175716301 1.310917149 1.453244732 1.120201718 1.214440514 1.450157203 1 16.45508037 -4.429541035 1.524645489 1.253080445 5.11E-14 0.566429472 0.134356111 2.059266386 2.232663701 0.036838221 5.040516096 3.72E-05 4.429541035 -1.253080445 S(ph)PDAPGR ddPTM_A459_MK2206_30min_R2 1 SPDAPGR 7 0 E7EUN2 E7EUN2 AGAP1 1 S(1)PDAPGR 79.906 0.045883 1948900 8220 6155.6 8676.4 11635 9598.7 9265.9 10113 21013 9398.1 9490.8 TRUE FALSE 8849.32952 5849.921855 8965.666846 10684.38328 9221.806808 9618.520317 8785.150952 23759.47125 10215.52975 9181.115973 0.963862078 0.637168932 0.976533449 1.163734704 1.004432014 1.04764174 0.956871798 2.5878631 1.112667543 1 13.16445381 S(ph)PDASSAFSPASPATPNGTK ddPTM_A459_MK2206_30min_R1 1 SPDASSAFSPASPATPNGTK 20 0 Q53GS7-2;Q53GS7 Q53GS7-2 GLE1 Nucleoporin GLE1 1 S(0.999)PDAS(0.001)SAFSPASPATPNGTK 181.86 1.81E-13 7776200 2322.3 2285.8 2287.8 1908.9 1806.1 1647.3 2507.3 1848.9 2166.3 2544 TRUE FALSE 2124.77619 2136.994005 2132.51051 2055.923809 1734.159213 1740.568702 2340.042592 1832.735262 2391.494637 2859.169926 0.743144425 0.747417628 0.745849518 0.719063176 0.60652541 0.608767141 0.818434249 0.641002567 0.836429698 1 11.48138065 -8.544485057 3.943509045 0.999733086 0.705150777 0.677196626 0.064275233 0.117688118 5.724235633 0.064093938 0.016807621 2.85E-09 8.544485057 -0.29458231 S(ph)PDASSAFSPASPATPNGTK ddPTM_A459_MK2206_30min_R2 2 SPDASSAFSPASPATPNGTK 20 0 Q53GS7-2;Q53GS7 Q53GS7-2 GLE1 Nucleoporin GLE1 1 S(0.985)PDAS(0.013)S(0.003)AFSPASPATPNGTK;S(1)PDASSAFSPASPATPNGTK 190.8 1.49E-15 25093000 111652 110586 99980 106148 94310 83010 103448 76487 67107 101946 TRUE FALSE 120200.163 105094.46 103313.2833 97475.36885 90606.91553 86169.00372 89865.15334 86484.11352 72943.84556 98619.51037 1.218827416 1.065655869 1.04759477 0.988398426 0.918752437 0.873752094 0.911230983 0.876947302 0.739649237 1 16.58958547 -4.923124956 0.559233797 0.862973325 1.386580192 0.739261459 0.063580225 1.696667203 0.452136971 0.035096236 0.567174027 1.19E-05 4.923124956 0.523606868 S(ph)PDEEDYDYESYEK ddPTM_A459_MK2206_30min_R1 3 SPDEEDYDYESYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(1)PDEEDYDYESYEK;S(1)PDEEDYDYESYEK;S(1)PDEEDYDYESYEK 235.93 1.03E-14 48375000 9398.21 9198.43 7942.8 5572.06 6758.54 6874.51 9546.45 6642.93 11951.04 15140.13 TRUE FALSE 8598.842888 8599.610535 7403.664866 6001.221027 6489.33304 7263.738815 8909.623739 6584.851563 13193.39338 17015.80361 0.505344507 0.505389621 0.435105214 0.352685137 0.381370941 0.426881914 0.523608755 0.38698446 0.775361169 1 14.05458767 -8.454524442 3.079741155 0.997530992 0.438958583 0.91421076 0.056793081 0.062936103 1.234986608 0.058726475 0.015697058 3.51E-09 8.454524442 -0.558572409 S(ph)PDEEDYDYESYEK ddPTM_A459_MK2206_30min_R2 4 SPDEEDYDYESYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.997)PDEEDY(0.003)DYESYEK;S(1)PDEEDYDYESYEK;S(1)PDEEDYDYESYEK;S(1)PDEEDYDYESYEK 267.07 3.69E-44 63608100 212571 124950 149262 147325 134263 101900 183073 136850 105505 183675 TRUE FALSE 228845.5992 118745.1647 154238.3206 135288.0762 128991.16 105777.8759 159035.2952 154736.7649 114681.6342 177681.6998 1.287952555 0.668302728 0.868059686 0.761406923 0.725967616 0.595322287 0.895057259 0.870864952 0.645433009 1 17.43893557 -4.754084165 24.99987958 0.77524756 1.287953456 0.612721872 0.120792 169.3073536 575415.8769 0.028821617 0.291197896 1.76E-05 4.754084165 0.512705896 S(ph)PDLEASLDTLENNCHVGSDIDFRPK ddPTM_A459_MK2206_30min_R1 1 SPDLEASLDTLENNCHVGSDIDFRPK 26 1 Q13111;Q13111-3;Q13111-2;K7EJF1 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 S(0.976)PDLEAS(0.023)LDTLENNCHVGSDIDFRPK 64.002 0.0008022 3607500 767.3 568.88 763.11 539.43 729.58 622.28 752.17 724.26 435.06 604.99 TRUE FALSE 702.0371057 531.8458086 711.3122193 580.9769921 700.5192837 657.5129558 701.9941117 717.9278712 480.2860439 679.9407286 1.032497505 0.782194368 1.046138567 0.854452407 1.030265219 0.967015106 1.032434273 1.055868315 0.706364575 1 9.40926518 -4.462371007 22.95326223 0.947795999 3.106186625 0.050660475 0.115254669 1458.417348 664027.3643 0.026275634 32007.08361 3.45E-05 4.462371007 2.158390626 S(ph)PDPFGAVAAQK ddPTM_A459_MK2206_30min_R1 1 SPDPFGAVAAQK 12 0 Q9Y3Q8;Q9Y3Q8-2 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 S(1)PDPFGAVAAQK 193.15 0.00015376 8747000 4772.6 4734.5 4185.7 2656.2 3033.3 3070.9 4172.1 2795.8 4028 5098.2 TRUE FALSE 4366.665308 4426.283189 3901.586346 2860.780984 2912.477238 3244.771704 3893.786821 2771.356615 4446.725014 5729.803505 0.762096868 0.772501742 0.680928472 0.499280819 0.508303162 0.566297204 0.679567252 0.483673936 0.776069373 1 12.48426995 -8.546408455 6.534292976 0.999974875 0.619180681 0.586518631 0.099623302 0.153488763 35.48854755 0.105244889 0.027248599 2.84E-09 8.546408455 -0.380794194 S(ph)PDPFGAVAAQK ddPTM_A459_MK2206_30min_R2 2 SPDPFGAVAAQK 12 0 Q9Y3Q8;Q9Y3Q8-2 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 S(1)PDPFGAVAAQK;S(1)PDPFGAVAAQK 169.09 0.00036182 18605000 135226 94575 99981 96195 80736 65000 83486 65673 52305 86040 TRUE FALSE 145579.0065 89878.54302 103314.3166 88335.56079 77565.89897 67473.62055 72524.18792 74256.68659 56854.39435 83232.52185 1.749063987 1.07984885 1.241273415 1.061310637 0.931918164 0.810664138 0.871344353 0.892159518 0.683079079 1 16.34485973 -1.522878745 0.50379923 0.842703953 27.82271622 0.811112744 0.122021888 44.40886643 0.466938021 0.064944852 1270.441272 0.03 1.522878745 26.98001227 S(ph)PDSCRPQALPCLPSTQDVPSR ddPTM_A459_MK2206_30min_R1 2 SPDSCRPQALPCLPSTQDVPSR 22 1 Q9Y283-2;Q9Y283 Q9Y283-2 INVS Inversin 1 S(0.968)PDS(0.031)CRPQALPCLPSTQDVPSR;S(0.856)PDS(0.134)CRPQALPCLPS(0.007)T(0.003)QDVPSR 65.454 0.0038036 13816600 872.23 741.45 898.11 562.87 613.44 622.71 719.63 947.98 811.1 669.07 TRUE FALSE 798.0422582 693.1814702 837.1487955 606.2223449 589.0053858 657.9673021 671.6247957 939.6919108 895.4167475 751.9594428 1.061283645 0.921833587 1.113289824 0.806190215 0.783294088 0.87500371 0.89316625 1.249657704 1.190777982 1 9.554511042 -7.752855978 24.99669277 1.165163389 0.917761333 0.452789302 0.112642668 154.5566777 450105.3318 0.056218791 0.031798047 1.77E-08 7.752855978 -0.247402056 S(ph)PDSCRPQALPCLPSTQDVPSR ddPTM_A459_MK2206_30min_R2 4 SPDSCRPQALPCLPSTQDVPSR 22 1 Q9Y283-2;Q9Y283 Q9Y283-2 INVS Inversin 1 S(0.981)PDS(0.009)CRPQALPCLPS(0.004)T(0.004)QDVPS(0.001)R;S(0.536)PDS(0.463)CRPQALPCLPSTQDVPSR;S(0.952)PDS(0.045)CRPQALPCLPS(0.002)T(0.001)QDVPSR;S(0.977)PDS(0.023)CRPQALPCLPSTQDVPSR 57.673 0.011447 31106900 10375 6562.2 15491.2 17051.2 16501.8 9316.7 18797.4 7113.3 15895.7 12574.5 TRUE FALSE 11169.31798 6236.33069 16007.66888 15658.06242 15853.85642 9671.253547 16329.2788 8043.032734 17278.27925 12164.19509 0.918212663 0.512679272 1.315966141 1.287225525 1.303321452 0.795059062 1.342405204 0.661205503 1.42042109 1 13.57035324 -5.263206995 24.99993846 1.134501025 0.715445966 0.30803963 0.254809323 170.3702579 2409639.319 0.063072237 0.143109614 5.45E-06 5.263206995 -0.419055059 S(ph)PDSTANVR ddPTM_A459_MK2206_30min_R1 2 SPDSTANVR 9 0 B7ZM87;O75044;E9PDX4;A0A087WW56;A0A286YEY3;A0A075B7B5;P0DMP2 B7ZM87 SRGAP2;SRGAP2B SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B 1 S(0.999)PDSTANVR;S(1)PDSTANVR 138.25 0.0024831 16110400 1968.52 1231.93 1212.5 1104.17 2390.21 2346.94 2329.5 1697.49 1124.67 1118.89 TRUE FALSE 1801.087037 1151.731133 1130.198878 1189.213365 2295.002874 2479.821715 2174.103305 1682.649024 1241.583471 1257.50654 1.432268524 0.915884805 0.898761829 0.945691594 1.825042495 1.972014964 1.728900197 1.338083716 0.987337585 1 10.29635019 -6.24527041 24.35721408 1.529656795 1.028033303 0.269592879 0.336667922 735.5614978 1108061.512 0.105526898 0.135750607 5.68E-07 6.24527041 -0.501623492 S(ph)PDSTANVR ddPTM_A459_MK2206_30min_R2 1 SPDSTANVR 9 0 B7ZM87;O75044;E9PDX4;A0A087WW56;A0A286YEY3;A0A075B7B5;P0DMP2 B7ZM87 SRGAP2;SRGAP2B SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B 1 S(0.997)PDS(0.001)T(0.001)ANVR 84.687 0.036166 25797000 7433.6 7164.4 8355.7 15251 10564 21832 9298.5 9194.7 11495 10557 TRUE FALSE 8002.722131 6808.626314 8634.274868 14004.94451 10149.20428 22662.83206 8077.59578 10396.47886 12494.81432 10212.52595 0.783618291 0.666693661 0.845459283 1.371349711 0.993799607 2.219121122 0.790949841 1.018012479 1.223479321 1 13.31805212 -5.646776392 4.934948299 1.24376603 0.732816448 0.253895067 0.368164126 0.284286361 11.01284744 0.101857221 0.180109857 2.26E-06 5.646776392 -0.510949582 S(ph)PDVISSASTALSQDIPEIASEALSR ddPTM_A459_MK2206_30min_R2 2 SPDVISSASTALSQDIPEIASEALSR 26 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 S(0.992)PDVIS(0.008)SASTALSQDIPEIASEALSR;S(0.968)PDVIS(0.024)S(0.007)AS(0.001)TALSQDIPEIASEALSR 156.71 5.12E-14 7578900 18929.9 22910.3 22862.6 24844.7 25652.2 22282.9 27545 18092.5 19547.2 23733 TRUE FALSE 20379.1877 21772.60782 23624.82767 22814.80854 24644.96574 23130.89137 23928.30841 20457.25187 21247.38012 22958.59415 0.887649634 0.94834238 1.029018916 0.993737177 1.073452737 1.007504694 1.042237528 0.89104985 0.925465208 1 14.48674668 -10.72915976 13.10953903 0.999999993 0.981785757 0.007998667 0.06039669 0 0 0.062730184 0.015214304 1.87E-11 10.72915976 -0.018214236 S(ph)PEAVGPELEAEEK ddPTM_A459_MK2206_30min_R1 4 SPEAVGPELEAEEK 14 0 Q96N64-3;Q96N64-2;Q96N64 Q96N64-3 PWWP2A PWWP domain-containing protein 2A 1 S(1)PEAVGPELEAEEK;S(1)PEAVGPELEAEEK;S(1)PEAVGPELEAEEK;S(1)PEAVGPELEAEEK 231.17 2.20E-13 86091200 4645.54 5186.82 4825.89 4483.45 4172.25 3675.7 4571.65 4367.47 3970.54 3760.3 TRUE FALSE 4250.412428 4849.157075 4498.322032 4828.766096 4006.060448 3883.814958 4266.68357 4329.28567 4383.291842 4226.154353 1.005739988 1.147415989 1.06440079 1.14259104 0.947920997 0.918995056 1.009590094 1.024403112 1.037182146 1 12.04512974 -6.264740407 24.99625588 0.988363123 1.0923043 0.495748952 0.049551709 247.3185148 1872760.871 0.0155173 0.018341818 5.44E-07 6.264740407 0.103941177 S(ph)PEAVGPELEAEEK ddPTM_A459_MK2206_30min_R2 2 SPEAVGPELEAEEK 14 0 Q96N64-3;Q96N64-2;Q96N64 Q96N64-3 PWWP2A PWWP domain-containing protein 2A 1 S(1)PEAVGPELEAEEK;S(1)PEAVGPELEAEEK 184.87 7.87E-05 56554000 32710 28450 29394 28935 27492 22440.1 32796 25163 20763.1 28631 TRUE FALSE 35214.30275 27037.21437 30373.98129 26570.91794 26412.52594 23294.07373 28489.8458 28451.8905 22569.03691 27696.77281 1.271422594 0.976186451 1.096661387 0.959350684 0.953631895 0.841039275 1.02863413 1.027263743 0.814861611 1 14.75743027 -1.522878771 0.856601539 0.950983304 111.7077857 0.562149877 0.080607005 525.3574697 1.415599166 0.027164826 113443.2398 0.029999998 1.522878771 110.7568024 S(ph)PEDQLGK ddPTM_A459_MK2206_30min_R1 2 SPEDQLGK 8 0 Q9UK61-3;Q9UK61;Q9UK61-2 Q9UK61-3 FAM208A Protein FAM208A 1 S(1)PEDQLGK;S(1)PEDQLGK 136.52 0.0025896 48610000 9566.3 9209.7 9107.4 6992.4 7137.1 6187.2 9255.7 7833.8 9390.2 10302.5 TRUE FALSE 8752.63595 8610.146856 8489.215063 7530.95586 6852.814194 6537.513917 8638.269141 7765.309913 10366.34489 11578.85148 0.755915728 0.74360975 0.733165554 0.65040612 0.591838854 0.56460815 0.746038513 0.670645955 0.895282655 1 13.49920454 -8.399687463 2.778354842 0.999073298 0.67849772 0.746622698 0.063147492 0.135689724 2.024942485 0.067017928 0.018221522 3.98E-09 8.399687463 -0.320575577 S(ph)PEDQLGK ddPTM_A459_MK2206_30min_R2 4 SPEDQLGK 8 0 Q9UK61-3;Q9UK61;Q9UK61-2 Q9UK61-3 FAM208A Protein FAM208A 1 S(1)PEDQLGK;S(1)PEDQLGK;S(1)PEDQLGK;S(1)PEDQLGK 123.79 0.0057376 84513000 312554 289293 309979 294679 260271 212101 312844 216945 206965 301272 TRUE FALSE 336483.3746 274927.1303 320313.5451 270602.7831 250051.4528 220172.6522 271767.207 245300.4564 224966.4416 291441.5193 1.154548519 0.943335496 1.099066275 0.928497709 0.857981572 0.75546083 0.932493104 0.841679857 0.771909377 1 18.1528469 -5.964638871 3.375954731 0.851704072 1.053273089 0.54487795 0.083313838 0.176901126 4.207559287 0.023576702 0.035400474 1.08E-06 5.964638871 0.201569017 S(ph)PEGTPQK ddPTM_A459_MK2206_30min_R2 1 SPEGTPQK 8 0 C9J0I9;Q86WB0;Q86WB0-3;F8WAU5;F8WBD7;F8WDK5;F8WF13 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 S(1)PEGTPQK 126.31 0.0048677 21181000 65668 31456 40295 41108 61902 40961 52606 123850 71513 72804 TRUE FALSE 70695.59257 29893.94078 41638.41519 37749.3449 59471.41645 42519.79956 45698.76901 140037.6202 77733.07147 70428.41144 1.003793655 0.424458541 0.591216163 0.535995973 0.844423653 0.603730777 0.648868377 1.988368293 1.103717518 1 16.10386992 -7.726529753 24.78165818 1.409532036 0.652202809 0.551833418 0.287803248 98.78459507 70125.21712 0.125842352 0.07265091 1.88E-08 7.726529753 -0.757329227 S(ph)PEHQPSAMSLLAPPSSR ddPTM_A459_MK2206_30min_R1 1 SPEHQPSAMSLLAPPSSR 18 0 H7BYJ3;O14578;O14578-4;O14578-3 H7BYJ3 CIT Citron Rho-interacting kinase 1 S(0.994)PEHQPS(0.006)AMSLLAPPSSR 78.848 0.023736 0 1115.2 971.23 1028.9 968.83 893.76 969.9 911.6 936.47 797.32 806.5 TRUE FALSE 1020.346384 908.0027505 959.0611347 1043.449454 858.1596466 1024.8149 850.7888273 928.2825415 880.2042672 906.4153088 1.125694121 1.00175134 1.058081351 1.151182515 0.946762084 1.130623998 0.938630249 1.02412496 0.971082746 1 9.824028417 -7.270633678 24.90732553 0.985469905 1.063639252 0.315924272 0.061342602 833.5338598 2258032.546 0.024093432 0.016501949 5.36E-08 7.270633678 0.078169347 S(ph)PEHSAEPIR ddPTM_A459_MK2206_30min_R1 2 SPEHSAEPIR 10 0 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2;Q9ULH0-5 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 S(1)PEHSAEPIR;S(1)PEHSAEPIR 117.14 0.0061178 11184800 1509.11 1513.84 1688.4 1412.28 1326.95 1328.64 1604.49 1597.13 1316 1651.11 TRUE FALSE 1380.75227 1415.288741 1573.796112 1521.05405 1274.094772 1403.866449 1497.4574 1583.166461 1452.802909 1855.661972 0.744075317 0.762686719 0.848104954 0.819682719 0.686598524 0.756531346 0.80696669 0.853154553 0.782902776 1 10.85771822 -9.8907735 0.480063658 1.036813833 0.773414118 0.663268619 0.046700746 4.822230512 1.075932494 0.357088752 0.026186961 1.29E-10 9.8907735 -0.263399715 S(ph)PEHSAEPIR ddPTM_A459_MK2206_30min_R2 1 SPEHSAEPIR 10 0 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2;Q9ULH0-5 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 S(1)PEHSAEPIR 110.31 0.0063103 6382300 42087 29690 35462 30752 25393 26262 31879 32969 31052 41644 TRUE FALSE 45309.21308 28215.63777 36644.28538 28239.46323 24395.94323 27261.41881 27693.24901 37278.1615 33752.84683 40285.15969 1.124712262 0.700397814 0.909622443 0.700989234 0.605581396 0.676711201 0.687430538 0.925357173 0.837848158 1 15.29796085 -10.45152135 21.54158379 1 0.785648249 0.140779744 0.148643963 0 0 0.145549102 0.035300842 3.54E-11 10.45152135 -0.214351751 S(ph)PEIHR ddPTM_A459_MK2206_30min_R2 3 SPEIHR 6 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8;Q9NYF8-4;Q9Y2W1;A0A3B3ITZ9 E9PK91;Q9NYF8-2;Q9Y2W1 BCLAF1;THRAP3 Bcl-2-associated transcription factor 1;Thyroid hormone receptor-associated protein 3 1 S(1)PEIHR;S(1)PEIHR;S(1)PEIHR 104.37 0.026396 159209000 107158 75527 74507 81926 85566 63776 86687 131654 79178 101322 TRUE FALSE 115362.0989 71776.43901 76991.02619 75232.38373 82206.24891 66203.04037 75304.89277 148861.6298 86064.75932 98015.87144 1.176973659 0.732294045 0.785495503 0.767553077 0.838703444 0.67543184 0.768292845 1.518750256 0.878069623 1 16.58072776 -7.690069991 24.99999707 1.148848239 0.808987579 0.337775145 0.199059481 42.39224321 14848.72819 0.088013843 0.050814891 2.04E-08 7.690069991 -0.33986066 S(ph)PEIMSTISGTR ddPTM_A459_MK2206_30min_R1 2 SPEIMSTISGTR 12 0 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(1)PEIMSTISGTR;S(1)PEIMSTISGTR 141.37 0.0009974 22856000 735.41 803.24 930.68 572.38 745.22 738.41 773.31 691.85 487.79 573.82 TRUE FALSE 672.8595177 750.94893 867.5080346 616.4648068 715.5363094 780.2181361 721.7239009 685.8012284 538.4975161 644.9091537 1.043340002 1.164425913 1.345163159 0.955894025 1.109514891 1.209810919 1.119109407 1.063407496 0.834997477 1 9.332952137 -8.045279248 3.885028978 0.919079966 1.138006719 0.40923819 0.10309986 0.223151512 6.867346945 0.074406232 0.027218003 9.01E-09 8.045279248 0.218926753 S(ph)PEIMSTISGTR ddPTM_A459_MK2206_30min_R2 2 SPEIMSTISGTR 12 0 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(1)PEIMSTISGTR;S(1)PEIMSTISGTR 113.52 0.0059209 10766000 3057.3 3126.7 6511.4 7094.4 3961.5 5997.7 3698.3 2635.3 9670.5 6996 TRUE FALSE 3291.369239 2971.432625 6728.486826 6514.764826 3805.951605 6225.946676 3212.708768 2979.742758 10511.62261 6767.721093 0.486333463 0.439059557 0.994202736 0.962623125 0.56236827 0.91994729 0.474710574 0.440287464 1.553199735 1 12.7244544 -8.258911298 24.99862462 1.276599876 0.673050297 0.504448202 0.244202196 178.459276 1764719.7 0.187117346 0.063209397 5.51E-09 8.258911298 -0.603549579 S(ph)PEPDGPAPAFLR ddPTM_A459_MK2206_30min_R1 3 SPEPDGPAPAFLR 13 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(1)PEPDGPAPAFLR;S(1)PEPDGPAPAFLR;S(1)PEPDGPAPAFLR 132.86 0.0013806 18369800 2948.23 2090.8 3205.52 2074.21 3277.71 2569.43 3005.47 2121.26 2637.86 3451.16 TRUE FALSE 2697.467557 1954.68854 2987.938233 2233.966014 3147.15187 2714.908906 2804.98058 2102.714047 2912.074987 3878.715756 0.695453786 0.50395251 0.77034215 0.575955072 0.811390179 0.699950467 0.723172503 0.542116046 0.750783293 1 11.92136334 -14.52287875 0.368641333 5.282293952 0.663607295 0.509942912 0.096165037 425.3952644 3.302099733 1450.209757 0.065675732 3.00E-15 14.52287875 -4.618686658 S(ph)PEPDGPAPAFLR ddPTM_A459_MK2206_30min_R2 3 SPEPDGPAPAFLR 13 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(1)PEPDGPAPAFLR;S(1)PEPDGPAPAFLR;S(1)PEPDGPAPAFLR 160.18 0.00036405 20661970 29664 33245.1 33647.6 32934.9 27238.3 31500.5 34262.6 25082.7 26635.31 29866.4 TRUE FALSE 31935.09865 31594.19668 34769.39419 30244.01332 26168.78748 32699.2736 29763.87946 28361.09501 28952.00112 28891.86181 1.105331974 1.093532735 1.203432109 1.046800428 0.905749434 1.131781462 1.03018212 0.981629194 1.002081531 1 14.81837555 -5.970160274 12.3529135 1.011385052 1.129277462 0.476847685 0.058701909 0.855913754 351.6168353 0.016581492 0.024562752 1.07E-06 5.970160274 0.117892409 S(ph)PEPDPYLSYR ddPTM_A459_MK2206_30min_R2 1 SPEPDPYLSYR 11 0 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 1 S(1)PEPDPYLSYR 151.13 0.0006014 2676200 27938 28243 24997 24531 26385 26358 29494 22882 20741 29261 TRUE FALSE 30076.95476 26840.49369 25830.3875 22526.73883 25348.99233 27361.07216 25621.40237 25872.75597 22545.01469 28306.21597 1.062556535 0.948219067 0.912534107 0.79582304 0.895527412 0.966610026 0.905151095 0.914030897 0.796468688 1 14.78883128 -4.794530783 2.120252668 0.894385182 1.105335659 0.405164603 0.060375531 0.658404828 3.446958029 0.016056501 0.267145116 1.60E-05 4.794530783 0.210950478 S(ph)PEPDTLPLAAGSDHPLPR ddPTM_A459_MK2206_30min_R2 2 SPEPDTLPLAAGSDHPLPR 19 0 H3BVB1;H3BME1;H7C112;H3BPZ0;Q6PCT2-2;Q6PCT2-3;Q6PCT2 H3BVB1 FBXL19 F-box/LRR-repeat protein 19 1 S(0.995)PEPDT(0.005)LPLAAGSDHPLPR;S(0.998)PEPDT(0.002)LPLAAGSDHPLPR 142.89 5.51E-05 6583600 32978 39597 34989 43244 33817 42756 41538 36668 34928.6 34704 TRUE FALSE 35502.82104 37630.67056 36155.5158 39710.82687 32489.17466 44383.10954 36084.0107 41460.6335 37966.62649 33571.61132 1.057525083 1.120907489 1.076966948 1.182869255 0.967757381 1.322042875 1.074837021 1.234990871 1.130914633 1 15.03495416 -6.74119881 24.99988721 1.162386643 1.088823532 0.115621724 0.095622991 500.9611557 618754.5074 0.029172592 0.029138151 1.81E-07 6.74119881 -0.073563111 S(ph)PEPEATLTFPFLDK ddPTM_A459_MK2206_30min_R1 2 SPEPEATLTFPFLDK 15 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(0.993)PEPEAT(0.006)LT(0.001)FPFLDK;S(1)PEPEATLTFPFLDK 197.47 2.82E-05 12117000 2345.31 3039.99 2437.71 1908.14 1928.01 1765.53 2135.4 1733.95 2471.05 2282.81 TRUE FALSE 2145.829069 2842.086098 2272.245037 2055.105273 1851.213279 1865.492783 1992.951362 1718.790258 2727.92449 2565.621737 0.836377802 1.107757257 0.885650836 0.801016472 0.721545679 0.727111388 0.7767908 0.669931281 1.063260593 1 11.32509277 -5.54785821 4.57757606 0.800339993 0.978475557 0.152040394 0.132442444 0.26082099 13.34270268 0.034566241 0.065158522 2.83E-06 5.54785821 0.178135564 S(ph)PEPEATLTFPFLDK ddPTM_A459_MK2206_30min_R2 2 SPEPEATLTFPFLDK 15 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(1)PEPEATLTFPFLDK;S(1)PEPEATLTFPFLDK 162.76 0.00010901 154048000 629590 523510 490470 594850 500270 410570 564370 502410 396750 535810 TRUE FALSE 677791.8945 497513.2547 506822.025 546248.8522 480626.8861 426194.5291 490267.5411 568076.712 431258.5978 518326.5636 1.307654174 0.959845182 0.977804459 1.053870071 0.927266553 0.822250988 0.945866131 1.095982247 0.832021023 1 18.98350181 -4.761422512 9.75476541 0.958264468 1.309300101 0.626881937 0.081106073 0.049890315 90.78777586 0.020325833 0.115312908 1.73E-05 4.761422512 0.351035634 S(ph)PEPEVLSTQEDLFDQSNK ddPTM_A459_MK2206_30min_R1 2 SPEPEVLSTQEDLFDQSNK 19 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(1)PEPEVLSTQEDLFDQSNK;S(1)PEPEVLSTQEDLFDQSNK 263.61 8.17E-48 5300000 3594.8 3678.8 3554.6 2776.8 2762.38 2354.47 3380.1 2683.03 4485.9 5214.2 TRUE FALSE 3289.043383 3439.309451 3313.323656 2990.669617 2652.348555 2487.778057 3154.619696 2659.572552 4952.225358 5860.174461 0.561253492 0.586895403 0.56539676 0.510337983 0.452605733 0.424522866 0.53831498 0.45383846 0.845064493 1 12.5167279 -8.411156854 3.569618668 0.995112491 0.512068682 0.907845071 0.053299742 0.065613924 1.462712877 0.056870988 0.015080606 3.88E-09 8.411156854 -0.48304381 S(ph)PEPGQTWTR ddPTM_A459_MK2206_30min_R1 4 SPEPGQTWTR 10 0 Q09666;E9PKR9;E9PLK4;E9PJZ0;E9PJC6;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(1)PEPGQTWTR;S(1)PEPGQTWTR;S(1)PEPGQTWTR;S(1)PEPGQTWTR 157.03 0.00049893 387977000 4631.73 4610.38 5005.48 3542.58 4485.71 4400.68 5748.92 4040.37 4530.23 5555.46 TRUE FALSE 4237.777041 4310.243424 4665.721964 3815.430125 4307.034672 4649.842699 5365.420036 4005.045471 5001.16362 6243.712326 0.678727145 0.690333442 0.747267286 0.611083587 0.689819525 0.744724045 0.859331717 0.641452594 0.800991999 1 12.60818835 -14.52287875 0.180919215 2.186734924 0.658252478 0.666446789 0.063345255 82.10871613 0.78939622 34.87093361 0.196774642 3.00E-15 14.52287875 -1.528482446 S(ph)PEPGQTWTR ddPTM_A459_MK2206_30min_R2 3 SPEPGQTWTR 10 0 Q09666;E9PKR9;E9PLK4;E9PJZ0;E9PJC6;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(1)PEPGQTWTR;S(1)PEPGQTWTR;S(1)PEPGQTWTR 147.24 0.00083207 309371400 164467.8 140942.6 155722.2 113324.7 69169.6 88530.9 85838.4 46897.8 59277.2 92905.5 TRUE FALSE 177059.5812 133943.5954 160913.9004 104065.7095 66453.65395 91900.00544 74567.71497 53027.50348 64433.02371 89874.00114 1.970086777 1.490348641 1.790438819 1.157906716 0.739409096 1.022542718 0.829691724 0.590020504 0.716926173 1 16.45561621 -5.932180221 2.871704775 0.808056202 1.732359577 0.86335484 0.16556071 0.090248498 1.509448299 0.050020928 0.078209165 1.17E-06 5.932180221 0.924303375 S(ph)PEPSPR ddPTM_A459_MK2206_30min_R1 1 SPEPSPR 7 0 G5E9Y3;Q8WWN8;Q05CH1 G5E9Y3 ARAP3 "Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3" 1 S(1)PEPSPR 86.136 0.035301 5675900 1748.8 1812.7 1724.2 1558.1 1556.2 1578.6 2278.7 1862.7 793.19 1229.4 TRUE FALSE 1600.055377 1694.692901 1607.166108 1678.105132 1494.213259 1667.978968 2126.692081 1846.41461 875.644939 1381.707353 1.158027691 1.226520867 1.163174028 1.214515597 1.081425278 1.207186865 1.539176929 1.336328279 0.633741245 1 10.43223637 -8.254183843 24.99819563 0.816870612 1.240368879 0.583159102 0.143363402 363.5314769 1252520.685 0.105728005 0.038145703 5.57E-09 8.254183843 0.423498267 S(ph)PESDRPR ddPTM_A459_MK2206_30min_R2 1 SPESDRPR 8 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 S(0.999)PES(0.001)DRPR 67.704 0.043302 35430000 25063 8040.8 20355 23328 20454 16332 19982 18370 13157 20341 TRUE FALSE 26981.84255 7641.505564 21033.62554 21422.02778 19650.87319 16953.5257 17358.3394 20771.02207 14301.37208 19677.27484 1.371218463 0.38834166 1.068929804 1.088668424 0.998658267 0.861578946 0.882151596 1.055584284 0.726796378 1 14.26424281 -9.651619966 12.05773302 1.000016957 0.93146166 0.005092353 0.245173735 0 0 0.221324428 0.053679058 2.23E-10 9.651619966 -0.068555297 S(ph)PESQVIGENTK ddPTM_A459_MK2206_30min_R2 2 SPESQVIGENTK 12 0 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 S(1)PESQVIGENTK;S(1)PESQVIGENTK 98.898 0.014861 10247400 40783 27834 33924 25203 26793 20937 33040 28017 20787.2 30298 TRUE FALSE 43905.37784 26451.80403 35055.00923 23143.83428 25740.9722 21733.77221 28701.80831 31678.9181 22595.23308 29309.37874 1.49799756 0.902503061 1.196033854 0.789639197 0.878250352 0.741529611 0.979270443 1.080845772 0.770921598 1 14.83907477 -2.510509924 1.262846373 0.91176174 200 0.591743805 0.139783001 356.6879962 2.171898323 0.040083416 203996.7044 0.003086669 2.510509924 199.0882383 S(ph)PEYTEVELK ddPTM_A459_MK2206_30min_R1 1 SPEYTEVELK 10 0 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 S(1)PEYTEVELK 94.692 0.023563 3048800 1101.6 1223.6 1447.5 673.37 966.25 870.47 1119.5 709.32 1119.3 1586.3 TRUE FALSE 1007.903135 1143.943418 1349.247733 725.2330741 927.7622164 919.7552592 1044.820198 703.11849 1235.65524 1782.82282 0.565341168 0.641647282 0.756804164 0.406789203 0.520389467 0.515898298 0.586048252 0.394384951 0.693089199 1 10.79994762 -8.538839387 21.22460595 1.000000006 0.552404941 0.655160772 0.099786994 220.6038251 293361.888 0.099143254 0.025598678 2.89E-09 8.538839387 -0.447595064 S(ph)PEYTEVELK ddPTM_A459_MK2206_30min_R2 1 SPEYTEVELK 10 0 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 S(1)PEYTEVELK 111.86 0.008594 2922500 10794 15139 11180 12477 12082 10109 14410 9985 9082.4 11524 TRUE FALSE 11620.39694 14387.21927 11552.73562 11457.58919 11607.59997 10493.70508 12517.94969 11290.07378 9872.370735 11147.97282 1.04237758 1.290568205 1.036308197 1.027773333 1.041229662 0.941310608 1.122890223 1.012746798 0.885575422 1 13.44449377 -5.445691415 9.045413754 1.01060879 1.1665299 0.383526067 0.080743439 0.391283266 43.27573183 0.020206913 0.042106162 3.58E-06 5.445691415 0.15592111 S(ph)PFEGAVTESQSLFSDNFR ddPTM_A459_MK2206_30min_R1 4 SPFEGAVTESQSLFSDNFR 19 0 O95628-3;O95628-2;O95628;O95628-8;O95628-4;O95628-7;O95628-9;O95628-10;O95628-6;O95628-5 O95628-3 CNOT4 CCR4-NOT transcription complex subunit 4 1 S(1)PFEGAVTESQSLFSDNFR;S(1)PFEGAVTESQSLFSDNFR;S(0.998)PFEGAVT(0.001)ES(0.001)QSLFSDNFR;S(1)PFEGAVTESQSLFSDNFR 288.78 2.44E-85 86710300 1469.98 1410.37 1300.66 992.87 1549.4 1109.2 1092.39 1045.24 945.17 984.78 TRUE FALSE 1344.950482 1318.554657 1212.374823 1069.341019 1487.684117 1172.001945 1019.518656 1036.101577 1043.423804 1106.781981 1.215190078 1.191340914 1.095405277 0.966171331 1.344152816 1.058927562 0.921155814 0.936138819 0.9427546 1 10.11215535 -7.002059977 24.99477654 0.951169257 1.154638961 0.544976395 0.09140001 65.6011096 795982.3176 0.033163145 0.028797791 9.95E-08 7.002059977 0.203469704 S(ph)PFEGAVTESQSLFSDNFR ddPTM_A459_MK2206_30min_R2 4 SPFEGAVTESQSLFSDNFR 19 0 O95628-3;O95628-2;O95628;O95628-8;O95628-4;O95628-7;O95628-9;O95628-10;O95628-6;O95628-5 O95628-3 CNOT4 CCR4-NOT transcription complex subunit 4 1 S(1)PFEGAVTESQSLFSDNFR;S(1)PFEGAVTESQSLFSDNFR;S(1)PFEGAVTESQSLFSDNFR;S(1)PFEGAVTESQSLFSDNFR 216.3 5.02E-19 28363600 17572.4 21148.5 20158.6 26245.2 23256.7 22750.9 27112 21770.2 21373.7 22156.2 TRUE FALSE 18917.75645 20098.29624 20830.67766 24100.88321 22343.5251 23616.70144 23552.16183 24615.63989 23232.74579 21433.24501 0.882636131 0.937715975 0.971886322 1.124462637 1.042470475 1.101872415 1.098861223 1.148479378 1.083958392 1 14.38756267 -5.558190196 2.670128445 1.091675893 0.910159244 0.744463936 0.042170214 0.1254114 1.793901336 0.011565347 0.024951809 2.77E-06 5.558190196 -0.181516649 S(ph)PFEHSVEHK ddPTM_A459_MK2206_30min_R1 2 SPFEHSVEHK 10 0 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(1)PFEHSVEHK;S(0.996)PFEHS(0.004)VEHK 124.38 0.0025536 16620200 10775 8131.3 9104.3 6532.5 11245.8 10611.5 11960 9757 9217.7 10675 TRUE FALSE 9858.529668 7601.950892 8486.325482 7035.634282 10797.85597 11212.31396 11162.17022 9671.695578 10175.9129 11997.49959 0.821715358 0.633627935 0.707341177 0.586425049 0.900008863 0.934554227 0.930374712 0.806142605 0.848169473 1 13.55044614 -6.278559696 24.49546358 0.896441081 0.684878409 0.668378049 0.074413611 379.6004703 543124.632 0.02289611 0.026029508 5.27E-07 6.278559696 -0.211562672 S(ph)PFEHSVEHK ddPTM_A459_MK2206_30min_R2 1 SPFEHSVEHK 10 0 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(1)PFEHSVEHK 179.6 7.37E-05 35593000 171790 149760 166610 190450 169690 156170 229040 153690 127240 187630 TRUE FALSE 184942.3745 142323.1362 172164.6942 174889.6258 163027.118 162113.1588 198966.7729 173777.8107 138307.1052 181507.6485 1.018923313 0.784116468 0.948525837 0.963538602 0.898183186 0.89314781 1.096189469 0.957413157 0.761990508 1 17.46967082 S(ph)PFLKPDER ddPTM_A459_MK2206_30min_R1 2 SPFLKPDER 9 1 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 S(1)PFLKPDER;S(1)PFLKPDER 86.344 0.018681 11441000 9004 10427 9977.1 8044.4 10007.1 9303.1 10507.1 9292.5 10136.6 10863.9 TRUE FALSE 8238.162518 9748.200405 9299.88225 8663.981082 9608.496017 9829.833482 9806.19053 9211.256652 11190.33584 12209.80195 0.674717129 0.798391362 0.761673472 0.70959227 0.786949375 0.805077226 0.803140835 0.754414911 0.916504288 1 13.57575218 -8.755242027 0.47431228 1.015657082 0.741004107 0.764151502 0.043758272 0.693948137 0.34597589 0.061207324 0.02539973 1.76E-09 8.755242027 -0.274652976 S(ph)PFLKPDER ddPTM_A459_MK2206_30min_R2 1 SPFLKPDER 9 1 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 S(1)PFLKPDER 73.9 0.034687 36432000 71157 70779 67038 65768 65022 52263 82546 53826 62113 72071 TRUE FALSE 76604.83463 67264.21778 69273.01346 60394.54402 62468.90957 54251.90509 71707.61104 60861.24301 67515.47647 69719.32917 1.098760352 0.964785786 0.993598393 0.866252512 0.896005603 0.778147262 1.028518374 0.87294648 0.968389646 1 16.08927107 -4.471653728 1.131321174 0.912298711 1.301329304 0.348364204 0.07154247 3.171906051 2.137064442 0.021427475 1.73474593 3.38E-05 4.471653728 0.389030593 S(ph)PFSTTR ddPTM_A459_MK2206_30min_R2 1 SPFSTTR 7 0 Q8NG27-3;Q8NG27;K7EPI8;Q8NG27-2 Q8NG27-3 PJA1 E3 ubiquitin-protein ligase Praja-1 1 S(0.999)PFS(0.001)TTR 85.862 0.035661 5470500 9451 8066.7 7823 9362.9 8271.1 8236.4 8041.4 10458 6648.1 11105 TRUE FALSE 10174.57583 7666.119408 8083.814915 8597.92112 7946.335055 8549.841974 6985.554521 11824.89651 7226.339721 10742.64476 0.947120198 0.713615649 0.752497648 0.800354225 0.739700068 0.795878684 0.650263941 1.100743511 0.6726779 1 13.3910616 -9.461596448 0.481009967 1.019097795 0.77943561 0.166212097 0.129491526 6.410637236 1.950675656 0.394336418 0.065128597 3.45E-10 9.461596448 -0.239662185 S(ph)PFSVAVSPSLDLSK ddPTM_A459_MK2206_30min_R2 1 SPFSVAVSPSLDLSK 15 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 S(0.994)PFS(0.006)VAVSPSLDLSK 188.92 2.56E-05 10509000 54445 64154 54664 63945 59089 48926 62264 51272 51172 54846 TRUE FALSE 58613.35106 60968.20565 56486.47048 58720.48895 56768.86896 50787.91321 54088.66201 57973.42644 55622.84806 53056.37951 1.104737104 1.149121109 1.064649925 1.106756426 1.069972536 0.957244231 1.019456331 1.092675885 1.048372478 1 15.69523861 -6.526711722 24.99722477 1.027366426 1.104143362 0.520342099 0.037450104 103.6715609 676099.1396 0.013181779 0.01324171 2.97E-07 6.526711722 0.076776936 S(ph)PGADVTCSLPR ddPTM_A459_MK2206_30min_R2 1 SPGADVTCSLPR 12 0 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 S(0.997)PGADVT(0.003)CSLPR 89.663 0.02547 4189300 4655.6 4988.3 7909.7 10225 7433.6 9863.1 8127.1 6211.6 7289.2 6021.4 TRUE FALSE 5012.036316 4740.588276 8173.40545 9389.584792 7141.719513 10238.44718 7060.002008 7023.477448 7923.20144 5824.922211 0.86044691 0.813845765 1.403178472 1.611967414 1.226062642 1.757696809 1.212033698 1.205763303 1.360224421 1 12.50802307 -5.260755893 24.92387883 1.369439443 0.837146286 0.494980771 0.205056467 42.49592924 1549562.593 0.051736495 0.121359205 5.49E-06 5.260755893 -0.532293157 S(ph)PGAFDMSGVR ddPTM_A459_MK2206_30min_R1 3 SPGAFDMSGVR 11 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 S(1)PGAFDMSGVR;S(1)PGAFDMSGVR;S(1)PGAFDMSGVR 160.86 0.00056772 136521000 2730.15 2564.5 2686.21 1718.63 1995.83 2062.1 2549.04 2059.38 2755.33 3256.4 TRUE FALSE 2497.936406 2397.550584 2503.877549 1850.99918 1916.331865 2178.85432 2378.998193 2041.375058 3041.756414 3659.827417 0.68252847 0.655099356 0.684151809 0.50576133 0.523612632 0.595343461 0.650030158 0.55777905 0.831120178 1 11.8375599 -8.474517801 3.256169919 0.998382503 0.606192858 0.818308623 0.06063994 0.092421812 2.138198713 0.063324726 0.01682701 3.35E-09 8.474517801 -0.392189645 S(ph)PGAFDMSGVR ddPTM_A459_MK2206_30min_R2 3 SPGAFDMSGVR 11 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 S(1)PGAFDMSGVR;S(1)PGAFDMSGVR;S(1)PGAFDMSGVR 144.28 0.00076984 162497000 236006 158435 184440 162931 143423 132892 172853 160106 110686 188582 TRUE FALSE 254074.8008 150567.3483 190589.1375 149619.0161 137791.4924 137949.2982 150157.1935 181032.4039 120313.2682 182428.5848 1.39273569 0.825349539 1.044732862 0.820151164 0.755317444 0.756182472 0.823101235 0.992346699 0.659508861 1 17.47697228 -2.728537727 1.426822492 0.839766627 200 0.631179661 0.121323898 317.7326398 2.350290263 0.0330952 205481.1125 0.001868367 2.728537727 199.1602334 S(ph)PGALETPSAAGSQGNTASQGK ddPTM_A459_MK2206_30min_R1 2 SPGALETPSAAGSQGNTASQGK 22 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 S(0.999)PGALET(0.001)PSAAGSQGNTASQGK;S(1)PGALETPSAAGSQGNTASQGK 296.6 1.97E-93 22345000 4640.7 4545.3 4209.9 4358.5 3938.8 3751.3 4212.6 3985.9 4208.4 4099.9 TRUE FALSE 4245.984096 4249.400144 3924.143717 4694.192425 3781.909255 3963.695364 3931.58514 3951.051697 4645.87824 4607.826565 0.921472203 0.922213561 0.851625742 1.018743297 0.820757727 0.860209322 0.853240695 0.857465367 1.008258053 1 12.1698707 -8.269717229 24.43851283 1.004129063 0.888132469 0.432772973 0.05308112 473.2245696 1397066.608 0.048441473 0.013350809 5.37E-09 8.269717229 -0.115996594 S(ph)PGALETPSAAGSQGNTASQGK ddPTM_A459_MK2206_30min_R2 4 SPGALETPSAAGSQGNTASQGK 22 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 S(1)PGALETPSAAGSQGNTASQGK;S(1)PGALETPSAAGSQGNTASQGK;S(1)PGALETPSAAGSQGNTASQGK;S(1)PGALETPSAAGSQGNTASQGK 231.93 1.17E-30 114780000 141442 143050 139358 143904 145001 126241 168687 128004 129743 145703 TRUE FALSE 152270.9083 135946.345 144004.1262 132146.5829 139307.5322 131045.1897 146538.1943 144734.5623 141027.8116 140948.723 1.080328399 0.964509235 1.021677409 0.937550763 0.988356114 0.929736623 1.039656061 1.026859692 1.000561116 1 17.10481088 S(ph)PGAPCQECSR ddPTM_A459_MK2206_30min_R1 4 SPGAPCQECSR 11 0 Q9NWF9-3;Q9NWF9;Q9NWF9-1 Q9NWF9-3 RNF216 E3 ubiquitin-protein ligase RNF216 1 S(1)PGAPCQECSR;S(1)PGAPCQECSR;S(1)PGAPCQECSR;S(1)PGAPCQECSR 133.98 0.0017177 12130700 1103.88 1158.47 1393.29 1033.7 1375.16 1166.31 1411.45 1221.54 1103.28 866.737 TRUE FALSE 1009.989209 1083.053392 1298.717357 1113.315753 1320.384465 1232.345464 1317.294746 1210.860205 1217.969904 974.1149231 1.036827571 1.111833282 1.333228068 1.142899802 1.355470935 1.26509248 1.352299112 1.243036295 1.25033492 1 9.927948177 -5.078564046 4.629664613 1.256230442 1.051080491 0.30737793 0.102121291 0.203553331 7.773906867 0.024210148 0.073743302 8.35E-06 5.078564046 -0.205149951 S(ph)PGAPCQECSR ddPTM_A459_MK2206_30min_R2 1 SPGAPCQECSR 11 0 Q9NWF9-3;Q9NWF9;Q9NWF9-1 Q9NWF9-3 RNF216 E3 ubiquitin-protein ligase RNF216 1 S(1)PGAPCQECSR 99.844 0.016854 10715000 3081.3 3293.7 950.6 3146.8 3170.2 2943.4 2991.3 1152.5 1610.5 2968.5 TRUE FALSE 3317.206697 3130.139647 982.2925296 2889.696374 3045.722019 3055.41315 2598.538717 1303.135707 1750.578379 2871.638088 1.155161826 1.09001885 0.342066966 1.006288496 1.060621821 1.063996596 0.904897705 0.453795244 0.609609681 1 11.48765822 -7.630144598 8.1077835 0.650077845 0.942439834 0.180345317 0.249605854 0.390970929 26.87290085 0.121575385 0.069850436 2.34E-08 7.630144598 0.29236199 S(ph)PGAPGPLTLK ddPTM_A459_MK2206_30min_R1 1 SPGAPGPLTLK 11 0 Q15942;Q15942-2;H0Y2Y8;C9JJK5 Q15942 ZYX Zyxin 1 S(1)PGAPGPLTLK 90.434 0.027833 8850900 3164.7 3064 3194.5 2992.7 2900.2 2262 2473.1 2884.2 2424.6 2203 TRUE FALSE 2895.525646 2864.533043 2977.66624 3223.198273 2784.678893 2390.072485 2308.124011 2858.983743 2676.645847 2475.924272 1.169472621 1.156955031 1.20264835 1.301816178 1.124702772 0.965325358 0.932227224 1.154713727 1.081069351 1 11.27375147 -6.533474879 7.199713553 1.031546603 1.205089098 0.614191961 0.067698831 0.106843864 30.65560278 0.023945725 0.02462939 2.93E-07 6.533474879 0.173542495 S(ph)PGAPGPLTLK ddPTM_A459_MK2206_30min_R2 6 SPGAPGPLTLK 11 0 Q15942;Q15942-2;H0Y2Y8;C9JJK5 Q15942 ZYX Zyxin 1 S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK 106.79 0.010921 886616400 775649 909994 819214 889125 871185 771960 946834 602153 730217 744376 TRUE FALSE 835033.2838 864805.0212 846526.1859 816480.6433 836977.8995 801337.4787 822513.5584 680856.4646 793729.9547 720087.0721 1.159628212 1.200972847 1.175588646 1.133863771 1.162328741 1.112834142 1.142241807 0.945519634 1.102269414 1 19.45781184 -7.661729288 7.277166769 1.01853703 1.156689591 0.699697565 0.041908654 0.119665685 7.576734762 0.019324947 0.011057297 2.18E-08 7.661729288 0.138152561 S(ph)PGAPSAGEAEARPSPSTTPLPDSSPSR ddPTM_A459_MK2206_30min_R2 1 SPGAPSAGEAEARPSPSTTPLPDSSPSR 28 1 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 S(0.915)PGAPS(0.077)AGEAEARPS(0.001)PS(0.002)T(0.002)T(0.002)PLPDS(0.001)SPSR 50.908 0.013275 5550100 8801.1 13216 8954.7 6564.2 11244 8000.8 9901.5 8272.3 6823.1 9775.5 TRUE FALSE 9474.918983 12559.71266 9253.245229 6027.883862 10802.50406 8305.27605 8601.421156 9353.518013 7416.560905 9456.526236 1.001944979 1.328152891 0.978503628 0.637431094 1.14233322 0.878258659 0.909575138 0.989107182 0.784279631 1 13.20709461 -5.506501879 24.6719666 0.906083228 1.162118834 0.330007642 0.145789867 621.2546703 935926.662 0.036367784 0.072532747 3.12E-06 5.506501879 0.256035605 S(ph)PGASNFSTLPK ddPTM_A459_MK2206_30min_R1 3 SPGASNFSTLPK 12 0 Q9Y4E8 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 S(0.999)PGAS(0.001)NFSTLPK;S(0.986)PGAS(0.013)NFSTLPK;S(0.998)PGAS(0.002)NFSTLPK 180.11 0.00010345 147572000 9669.6 10619 9971.2 7597.8 9175 8245.7 9698.3 8016.6 9205.9 9381.6 TRUE FALSE 8847.149743 9927.70117 9294.382725 8182.983872 8809.540322 8712.564408 9051.344103 7946.511711 10162.88625 10543.86344 0.839080456 0.941562002 0.88149688 0.776089706 0.835513508 0.826316128 0.858446637 0.753662238 0.963867401 1 13.36411597 -8.435214952 6.273572104 0.999431604 0.842137387 0.577926473 0.049241386 0.156794532 8.489073118 0.049521243 0.012830631 3.67E-09 8.435214952 -0.157294217 S(ph)PGASNFSTLPK ddPTM_A459_MK2206_30min_R2 5 SPGASNFSTLPK 12 0 Q9Y4E8 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 S(0.999)PGAS(0.001)NFSTLPK;S(0.999)PGAS(0.001)NFSTLPK;S(1)PGASNFSTLPK;S(0.999)PGAS(0.001)NFSTLPK;S(1)PGASNFSTLPK 165.78 0.00049709 250952200 220174 245184 228501 245566 227881 216559 266789 207625 194147 241865 TRUE FALSE 237030.6907 233008.5191 236119.1093 225502.4723 218933.2469 224800.3045 231759.2838 234762.3004 211033.5551 233972.9649 1.013068714 0.995877961 1.009172617 0.963797131 0.935720275 0.960796067 0.990538732 1.003373619 0.901957007 1 17.83598231 -5.764036119 24.99832056 0.964957378 1.005023589 0.295218667 0.028924553 86.60606737 833754.0065 0.008016247 0.012536524 1.72E-06 5.764036119 0.040066211 S(ph)PGDFTSAAQLASTPFHK ddPTM_A459_MK2206_30min_R1 1 SPGDFTSAAQLASTPFHK 18 0 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 S(0.999)PGDFT(0.001)SAAQLASTPFHK 140.12 0.00021215 13631000 3302.4 2380.5 2722 2656.9 2726.4 2357.6 3067.8 2754.2 2333.3 1914.2 TRUE FALSE 3021.513538 2225.529017 2537.238224 2861.534898 2617.801715 2491.085275 2863.15266 2730.12032 2575.854885 2151.345547 1.404476162 1.034482359 1.179372708 1.330114031 1.216820663 1.157919646 1.330866007 1.2690292 1.197322712 1 11.07102355 -8.610244717 8.373759472 1.000000053 1.233929322 0.343957149 0.098889972 5.981967248 573.8330586 0.093641751 0.024199342 2.45E-09 8.610244717 0.233929269 S(ph)PGDFTSAAQLASTPFHK ddPTM_A459_MK2206_30min_R2 3 SPGDFTSAAQLASTPFHK 18 0 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 S(0.992)PGDFT(0.008)SAAQLASTPFHK;S(0.987)PGDFT(0.013)SAAQLASTPFHK;S(0.997)PGDFT(0.003)SAAQLASTPFHK 171.83 3.95E-08 14631300 76914 100627 87987 97849 99513 89257 92860 71838 81398.9 83575 TRUE FALSE 82802.59498 95630.00951 90920.44267 89854.4237 95605.61961 92653.73768 80667.37046 81227.47326 88478.82919 80847.95459 1.024176745 1.18283771 1.124585565 1.111400086 1.182536034 1.146024512 0.997766373 1.004694227 1.0943855 1 16.30292365 -7.257112412 24.97084265 1.024602709 1.132547337 0.519946886 0.049046791 284.220107 1640232.079 0.01867423 0.013971384 5.53E-08 7.257112412 0.107944628 S(ph)PGEPGGAAPER ddPTM_A459_MK2206_30min_R2 1 SPGEPGGAAPER 12 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 S(1)PGEPGGAAPER 112.02 0.0065517 130780000 17669 18669 17546 21466 16142 14734 20271 15461 16409 20933 TRUE FALSE 19021.75223 17741.92461 18130.97488 19712.15913 15508.18397 15294.71269 17609.39335 17481.80579 17836.22516 20249.95792 0.939347741 0.876146246 0.895358645 0.97344198 0.765837837 0.755296023 0.869601478 0.863300845 0.880803073 1 14.30563129 -6.250692767 24.97375414 0.844635804 0.91602776 0.16785542 0.068166309 1207.565438 2806228.056 0.020283293 0.025936407 5.61E-07 6.250692767 0.071391957 S(ph)PGEYINIDFGEPGAR ddPTM_A459_MK2206_30min_R1 2 SPGEYINIDFGEPGAR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(1)PGEYINIDFGEPGAR;S(1)PGEYINIDFGEPGAR 194.05 1.19E-06 40968000 3923.3 3682.3 4751.3 3947.2 3586.3 3913 4602.5 3602.5 4475.3 5068.9 TRUE FALSE 3589.602733 3442.581601 4428.794994 4251.214028 3443.450077 4134.550678 4295.475623 3571.003722 4940.52345 5696.8736 0.63010047 0.604293134 0.777407979 0.746236326 0.604445582 0.72575784 0.75400578 0.626835695 0.86723417 1 12.47595468 -8.480268458 3.707371535 0.998864444 0.687894638 0.735230578 0.062364635 0.102200241 3.137436108 0.06155087 0.016210884 3.31E-09 8.480268458 -0.310969806 S(ph)PGEYINIDFGEPGAR ddPTM_A459_MK2206_30min_R2 1 SPGEYINIDFGEPGAR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(1)PGEYINIDFGEPGAR 101.04 0.0056913 2664100 9112.4 8477.4 9562.4 8590.5 7896.2 11703 11568 10841 10187 10559 TRUE FALSE 9810.05235 8056.424643 9881.205643 7888.62867 7586.155513 12148.36587 10049.1077 12257.95592 11073.04685 10214.46069 0.960408253 0.788727363 0.96737419 0.772300066 0.742687817 1.18933013 0.983811873 1.200059043 1.084055945 1 13.31832541 -6.762949631 24.99999854 1.097227627 0.845716366 0.628384721 0.094209634 25.6262014 424198.6788 0.031272426 0.029067122 1.73E-07 6.762949631 -0.251511262 S(ph)PGFASPK ddPTM_A459_MK2206_30min_R1 1 SPGFASPK 8 0 P49790-3;P49790 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 S(1)PGFASPK 94.409 0.022719 6407700 2969.4 3021.3 2869.6 1977.2 2102.5 1828 2030.9 1448.9 2084.9 2213.8 TRUE FALSE 2716.836937 2824.612821 2674.819547 2129.484287 2018.752973 1931.49978 1895.422367 1436.23242 2301.632816 2488.062257 1.091948937 1.135266134 1.075061341 0.855880628 0.811375586 0.776306853 0.761806647 0.57724939 0.925070427 1 11.28080687 -5.808124933 2.465009742 0.784143171 1.117519896 0.603692422 0.105683343 0.171809698 2.127759504 0.030600764 0.054036113 1.56E-06 5.808124933 0.333376725 S(ph)PGFASPK ddPTM_A459_MK2206_30min_R2 1 SPGFASPK 8 0 P49790-3;P49790 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 S(1)PGFASPK 93.556 0.023898 8284900 65117 44275 50199 43044 32292 30669 34715 28493 22822 45968 TRUE FALSE 70102.40759 42076.36788 51872.60961 39527.16751 31024.05383 31836.13029 30156.8788 32217.13293 24807.01631 44468.06792 1.576466234 0.946215337 1.166513681 0.888888799 0.69767038 0.715932393 0.678169307 0.724500398 0.557861348 1 15.4404821 -1.522878745 0.507511944 0.701482921 28.14393378 0.72660362 0.149046662 54.90017469 0.571283241 0.077714054 1612.185737 0.03 1.522878745 27.44245086 S(ph)PGGAGAGATGGSTAR ddPTM_A459_MK2206_30min_R1 2 SPGGAGAGATGGSTAR 16 0 F8W8C1;Q6ZTA4-2;Q6ZTA4 F8W8C1 TRIM67 Tripartite motif-containing protein 67 1 S(1)PGGAGAGATGGSTAR;S(1)PGGAGAGATGGSTAR 145.7 0.0003679 2546900 127.029 78.626 0 149.66 253.95 167.35 151.57 280.61 165.72 0 TRUE FALSE 116.2245165 73.50743311 0 161.1868391 243.8346338 176.8252124 141.4590419 278.1566564 182.947187 0 0 S(ph)PGGAGAGATGGSTAR ddPTM_A459_MK2206_30min_R2 2 SPGGAGAGATGGSTAR 16 0 F8W8C1;Q6ZTA4-2;Q6ZTA4 F8W8C1 TRIM67 Tripartite motif-containing protein 67 1 S(1)PGGAGAGATGGSTAR;S(1)PGGAGAGATGGSTAR 107.13 0.003373 6537300 0 555.01 1040.4 1084.23 1197.83 821.38 1021.14 835.31 0 1454.75 TRUE FALSE 0 527.4490105 1075.086417 995.6449407 1150.797176 852.6381915 887.0630914 944.487885 0 1407.281627 0 0.374799898 0.763945465 0.707495161 0.81774476 0.60587602 0.630338004 0.671143478 0 1 10.45869536 -4.929688767 3.094066033 0.642524329 7.00E-20 0.405752291 0.244283691 0.285783041 4.906968716 0.06157326 0.378865531 1.18E-05 4.929688767 -0.642524329 S(ph)PGGGSEANGLALVSGFK ddPTM_A459_MK2206_30min_R1 2 SPGGGSEANGLALVSGFK 18 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 S(1)PGGGSEANGLALVSGFK;S(1)PGGGSEANGLALVSGFK 214.52 2.95E-12 43419000 6169 5869.4 5848 4853.1 5911.1 4959.6 5911.5 4957.3 5167.1 5240.4 TRUE FALSE 5644.294155 5487.300993 5451.054053 5226.886603 5675.64837 5240.408266 5517.154621 4913.958849 5704.238536 5889.620315 0.958346014 0.931690109 0.925535733 0.887474289 0.963669654 0.889770136 0.936758963 0.834342213 0.968523985 1 12.52395892 -6.780304224 24.99671854 0.916205461 0.93026933 0 0.046196691 1313.110196 1739913.65 0.015412441 0.013613367 1.66E-07 6.780304224 0.014063868 S(ph)PGGGSEANGLALVSGFK ddPTM_A459_MK2206_30min_R2 4 SPGGGSEANGLALVSGFK 18 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 S(1)PGGGSEANGLALVSGFK;S(1)PGGGSEANGLALVSGFK;S(1)PGGGSEANGLALVSGFK;S(1)PGGGSEANGLALVSGFK 221.51 1.72E-14 43580000 101654.7 119911 100072.9 129936 97416.3 99750.9 113330 94316.4 83948 103195.9 TRUE FALSE 109437.462 113956.3941 103409.2805 119319.8132 93591.24658 103546.9904 98449.63487 106643.8773 91249.6453 99828.62623 1.09625331 1.141520207 1.035868011 1.19524647 0.937519128 1.037247474 0.986186413 1.068269507 0.914062917 1 16.60716595 -6.268523089 24.99738056 0.996077986 1.113146588 0.552594325 0.055658066 431.5742016 1522961.095 0.016044137 0.018559068 5.39E-07 6.268523089 0.117068601 S(ph)PGGPGSHVR ddPTM_A459_MK2206_30min_R2 4 SPGGPGSHVR 10 0 O75382-3;O75382-2;O75382;A0A1W2PPI7;O75382-4 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 S(1)PGGPGSHVR;S(1)PGGPGSHVR;S(1)PGGPGSHVR;S(1)PGGPGSHVR 130.69 0.0018105 31358600 45019.1 46060.7 42952.9 47093.8 41958.6 50969.2 45922.6 41401.2 45880.5 43668 TRUE FALSE 48465.79691 43773.39262 44384.92825 43246.08589 40311.09454 52908.86862 39892.90746 46812.47899 49871.10296 42243.11674 1.14730637 1.036225449 1.050702024 1.023742783 0.954264213 1.252484966 0.944364681 1.108168208 1.180573471 1 15.36642866 S(ph)PGHMVILDQTK ddPTM_A459_MK2206_30min_R1 8 SPGHMVILDQTK 12 0 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK 225.86 1.30E-09 143205200 52719 58157.2 53142.6 47170.3 49862.9 54416.3 56957.9 44151.5 56880.7 54096.4 TRUE FALSE 48234.97221 54371.15571 49535.42838 50803.36468 47876.75511 57497.30388 53158.34242 43765.48809 62793.65231 60798.27044 0.793360927 0.894287869 0.814750617 0.835605426 0.787469031 0.945706242 0.874339714 0.719847584 1.032819714 1 15.89174266 -8.284100232 24.97322423 1.016409935 0.838275369 0.599823065 0.059751385 619.0574505 682220.9107 0.056257602 0.014566767 5.20E-09 8.284100232 -0.178134566 S(ph)PGHMVILDQTK ddPTM_A459_MK2206_30min_R2 12 SPGHMVILDQTK 12 0 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK 218.6 2.75E-08 348550000 1075147 1064271 1013970 1172356 970672 956145 1267800 1028939 835109 1099646 TRUE FALSE 1157461.081 1011420.85 1047775.254 1076570.765 932558.54 992531.768 1101336.337 1163424.86 907745.2713 1063764.641 1.088080047 0.950793823 0.984969055 1.012038493 0.876658712 0.933036999 1.035319557 1.093686343 0.853332811 1 20.02074756 -4.754404348 24.92998497 0.973600516 1.088080253 0.208439459 0.068235682 404.6346446 1433772.622 0.017067334 0.165658757 1.76E-05 4.754404348 0.114479737 S(ph)PGIISQASAPR ddPTM_A459_MK2206_30min_R1 2 SPGIISQASAPR 12 0 Q08495;Q08495-2;E5RGQ0;Q08495-3;Q08495-4;E5RFK4;E5RGQ7;E5RJC0 Q08495 DMTN Dematin 1 S(1)PGIISQASAPR;S(1)PGIISQASAPR 103.13 0.010973 24474000 1363.43 1394.14 1335.92 1178.07 1228.9 1022.14 1032.77 1159.2 1001.39 1091.09 TRUE FALSE 1247.463119 1303.381233 1245.241472 1268.805156 1179.950311 1080.012683 963.8757977 1149.065237 1105.488074 1226.262467 1.017288837 1.062889282 1.015477116 1.034692972 0.962233081 0.880735334 0.786027318 0.937046732 0.901510161 1 10.26005209 -6.503391545 2.880920088 0.890376373 1.033463143 0.582751174 0.051928277 0.178943607 2.9995953 0.017812803 0.019236527 3.14E-07 6.503391545 0.14308677 S(ph)PGIISQASAPR ddPTM_A459_MK2206_30min_R2 4 SPGIISQASAPR 12 0 Q08495;Q08495-2;E5RGQ0;Q08495-3;Q08495-4;E5RFK4;E5RGQ7;E5RJC0 Q08495 DMTN Dematin 1 S(1)PGIISQASAPR;S(1)PGIISQASAPR;S(1)PGIISQASAPR;S(1)PGIISQASAPR 133.04 0.0017982 46747000 78840 93516 72577 86783 69981.4 57319.6 93938 71068 55348.6 81477 TRUE FALSE 84876.05102 88872.13142 74996.68096 79692.55129 67233.57861 59500.93754 81603.82776 80356.83161 60162.72118 78818.41216 1.076855632 1.127555466 0.951512203 1.011090545 0.853018689 0.75491165 1.035339656 1.019518529 0.763307957 1 16.26624507 -5.488535023 1.583892538 0.910183732 1.109697684 0.345312589 0.098241589 0.50274509 2.359436428 0.030855549 0.100576004 3.25E-06 5.488535023 0.199513952 S(ph)PGILGYNICPR ddPTM_A459_MK2206_30min_R1 2 SPGILGYNICPR 12 0 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(1)PGILGYNICPR;S(1)PGILGYNICPR 109.15 0.0077626 19132700 1078.2 1378.79 1026.02 824.04 1024.08 896.29 1036.8 818.39 954.38 941.72 TRUE FALSE 986.4934281 1289.03052 956.3766211 887.5077036 983.2887251 947.0371652 967.6369637 811.2349025 1053.591216 1058.387383 0.932072173 1.217919394 0.903616801 0.838547131 0.929044262 0.894792569 0.914255951 0.766482023 0.99546842 1 10.04765205 -5.379880784 9.459045279 0.894792086 1.074641399 0.352241511 0.091242852 0.303493157 22.34889338 0.021942808 0.045749919 4.17E-06 5.379880784 0.179849312 S(ph)PGILGYNICPR ddPTM_A459_MK2206_30min_R2 2 SPGILGYNICPR 12 0 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(1)PGILGYNICPR;S(1)PGILGYNICPR 161.48 0.00048249 19501300 3561.6 2606.7 1091.5 4836.4 2975.5 3276.7 3996.03 2160.8 3260.56 3586.3 TRUE FALSE 3834.278834 2477.255068 1127.890065 4441.250649 2858.666919 3401.397115 3471.346461 2443.223979 3544.157615 3469.279325 1.105209029 0.71405466 0.325107885 1.280165197 0.823994453 0.98043334 1.00059584 0.704245392 1.021583241 1 11.76042029 -5.771096648 24.99927737 0.955929976 0.714716876 0.216604902 0.223385027 319.8622821 828011.7655 0.062596247 0.094175692 1.69E-06 5.771096648 -0.2412131 S(ph)PGKAEAESDALPDDTVIESEALPSDIAAEAR ddPTM_A459_MK2206_30min_R1 6 SPGKAEAESDALPDDTVIESEALPSDIAAEAR 32 1 G3V529;Q9GZR7-2;Q9GZR7;A0A1W2PRR2;F5GYL3 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 S(0.996)PGKAEAES(0.004)DALPDDTVIESEALPSDIAAEAR;S(0.981)PGKAEAES(0.018)DALPDDTVIESEALPSDIAAEAR;S(0.965)PGKAEAES(0.034)DALPDDT(0.001)VIESEALPSDIAAEAR;S(0.992)PGKAEAES(0.008)DALPDDTVIESEALPSDIAAEAR;S(0.988)PGKAEAES(0.012)DALPDDTVIESEALPSDIAAEAR;S(0.969)PGKAEAES(0.031)DALPDDT(0.001)VIESEALPSDIAAEAR 136.94 3.57E-19 255790900 24285.23 26921.25 25021.34 25716.56 22134.82 19473.7 18912.13 21492.29 20033.25 14410.9 TRUE FALSE 22219.64366 25168.67173 23322.96115 27697.25391 21253.14325 20576.28407 17650.53631 21304.38517 22115.77803 16196.23109 1.371902114 1.553983244 1.44002398 1.710104885 1.312227711 1.270436557 1.089792818 1.315391529 1.365489163 1 13.98337051 -6.469507058 6.248158953 1.227354884 1.516807631 0.564102697 0.128493481 0.172099577 15.29063671 0.039546413 0.044288865 3.39E-07 6.469507058 0.289452747 S(ph)PGKAEAESDALPDDTVIESEALPSDIAAEAR ddPTM_A459_MK2206_30min_R2 5 SPGKAEAESDALPDDTVIESEALPSDIAAEAR 32 1 G3V529;Q9GZR7-2;Q9GZR7;A0A1W2PRR2;F5GYL3 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 S(0.994)PGKAEAES(0.006)DALPDDTVIESEALPSDIAAEAR;S(0.959)PGKAEAES(0.033)DALPDDT(0.008)VIESEALPSDIAAEAR;S(0.996)PGKAEAES(0.004)DALPDDTVIESEALPSDIAAEAR;S(0.933)PGKAEAES(0.066)DALPDDTVIESEALPSDIAAEAR;S(0.958)PGKAEAES(0.042)DALPDDTVIESEALPSDIAAEAR 106.81 5.39E-12 135529700 165215.4 221220.3 179866.8 208441.4 203988 157849.7 251965 190938.1 161215.4 194472.4 TRUE FALSE 177864.4181 210234.8216 185863.4693 191411.0708 195978.4062 163856.7809 218881.6928 215894.3653 175237.6241 188126.7815 0.945449747 1.117516708 0.987969219 1.017457851 1.041735816 0.870991252 1.163479708 1.147600376 0.931486855 1 17.52134572 -7.287648312 24.99514981 1.072941736 1.004910925 0.104634902 0.0866324 1702.434371 1623585.238 0.035639763 0.024037234 5.16E-08 7.287648312 -0.06803081 S(ph)PGLCSDSLEK ddPTM_A459_MK2206_30min_R1 3 SPGLCSDSLEK 11 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(1)PGLCSDSLEK;S(1)PGLCSDSLEK;S(1)PGLCSDSLEK 198.97 1.96E-05 50259800 4574.69 5327.44 4754.05 4318.34 4055.45 3484.37 4801.27 3726.01 4809.1 5007.88 TRUE FALSE 4185.588593 4980.622688 4431.358332 4650.939295 3893.912839 3681.652018 4480.986039 3693.433887 5309.023155 5628.293982 0.743669148 0.884925824 0.787335975 0.826349745 0.691846029 0.654132856 0.796153515 0.656226185 0.94327396 1 12.45848197 -8.41842842 5.394216274 0.998006457 0.759278374 0.607762694 0.07013369 0.146902767 5.715209112 0.070804783 0.018401521 3.82E-09 8.41842842 -0.238728082 S(ph)PGLCSDSLEK ddPTM_A459_MK2206_30min_R2 2 SPGLCSDSLEK 11 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(1)PGLCSDSLEK;S(1)PGLCSDSLEK 174.21 0.00014524 69462000 220495 205832 191196 229000 197117 185685 212280 173064 169646 224110 TRUE FALSE 237376.2667 195610.6822 197570.3792 210289.9675 189377.1961 192751.3728 184407.381 195684.059 184401.5024 216797.3091 1.09492257 0.902274493 0.911313798 0.969984214 0.873521895 0.889085633 0.850598108 0.902612952 0.850570993 1 17.72598732 -4.761424271 9.78995029 0.90141286 1.095816678 0.609064704 0.045406856 0.048404393 90.1424986 0.010965785 0.062186587 1.73E-05 4.761424271 0.194403818 S(ph)PGLLDTTPIR ddPTM_A459_MK2206_30min_R1 4 SPGLLDTTPIR 11 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 S(1)PGLLDTTPIR;S(1)PGLLDTTPIR;S(1)PGLLDTTPIR;S(1)PGLLDTTPIR 136.27 0.0014288 39884400 3362.43 3580.99 2890.17 2550.29 3285.86 3752.26 3462.25 3189.47 3091.27 2567.54 TRUE FALSE 3076.437672 3347.8669 2693.993313 2746.713778 3154.977238 3964.709719 3231.28962 3161.5848 3412.618579 2885.626239 1.066124791 1.160187295 0.933590524 0.95186055 1.093342303 1.373951229 1.119787995 1.095632122 1.18262668 1 11.49466873 -6.525305814 24.99973936 1.166594866 1.029641869 0.237263977 0.105774775 107.6842597 1109169.216 0.035501982 0.035718947 2.98E-07 6.525305814 -0.136952997 S(ph)PGLLDTTPIR ddPTM_A459_MK2206_30min_R2 3 SPGLLDTTPIR 11 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 S(1)PGLLDTTPIR;S(1)PGLLDTTPIR;S(1)PGLLDTTPIR 101.56 0.015157 29382000 21284.5 29504.9 25806 36797.3 27490.2 29398.2 31488.2 27903.3 22898.7 28053.5 TRUE FALSE 22914.05769 28039.72957 26666.35916 33790.84288 26410.79662 30516.9691 27353.76152 31550.35712 24890.38753 27138.11659 0.844349592 1.033223123 0.982616427 1.245143257 0.97319932 1.124505785 1.007946201 1.162584626 0.917174464 1 14.72803298 -4.458126576 1.66732056 1.06272356 0.56368462 0.294472109 0.094603196 2.968600183 4.042112364 0.024078479 3.098266126 3.48E-05 4.458126576 -0.49903894 S(ph)PGLPMSDLK ddPTM_A459_MK2206_30min_R1 3 SPGLPMSDLK 10 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;H0Y2S9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)PGLPMSDLK;S(1)PGLPMSDLK;S(1)PGLPMSDLK 130.1 0.0028366 37700000 9783 10230.7 9212 6646.9 7498.9 7613.5 9311.4 7051.5 10673.1 14501.2 TRUE FALSE 8950.904477 9564.67957 8586.715106 7158.84539 7200.202934 8044.569791 8690.253496 6989.849479 11782.60694 16297.71813 0.549212129 0.586872315 0.526866095 0.439254461 0.441792089 0.493600989 0.533219032 0.428885162 0.72296053 1 13.99238236 -8.546490467 3.389296686 0.999277431 0.501603259 0.907706396 0.050053773 0.066216687 2.096399966 0.052789778 0.013955733 2.84E-09 8.546490467 -0.497674173 S(ph)PGLPMSDLK ddPTM_A459_MK2206_30min_R2 3 SPGLPMSDLK 10 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;H0Y2S9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)PGLPMSDLK;S(1)PGLPMSDLK;S(1)PGLPMSDLK 115.29 0.0066943 25903600 193526 125096 134772 129371 107821 90711 133397 112862 77033 160120 TRUE FALSE 208342.4994 118883.9145 139265.2312 118800.9755 103587.4058 94163.07067 115881.8137 127613.4509 83733.1911 154895.2975 1.345053741 0.767511451 0.8990927 0.766975998 0.668757589 0.607914328 0.748129966 0.82386911 0.540579297 1 17.24093382 -2.507763289 1.248935979 0.732755926 199.9999601 0.640593932 0.1300955 290.241559 1.835634726 0.036429112 164207.0122 0.003106252 2.507763289 199.2672042 S(ph)PGLYFLTAGDQGTLR ddPTM_A459_MK2206_30min_R2 1 SPGLYFLTAGDQGTLR 16 0 A0A087WYP7;J3KNP2;Q12788 A0A087WYP7 TBL3 Transducin beta-like protein 3 1 S(1)PGLYFLTAGDQGTLR 94.007 0.0095566 1278000 2699.4 3648.1 3272.9 4936.9 3682.3 4808.9 3875.4 3961.5 3731.8 3828.6 TRUE FALSE 2906.068139 3466.940659 3382.016852 4533.539478 3537.7144 4991.906059 3366.555325 4479.281652 4056.385218 3703.673096 0.784644882 0.936081714 0.913152097 1.224065775 0.955190782 1.347825775 0.90897745 1.209416041 1.09523306 1 11.85474105 -5.639844443 6.38074026 1.109689862 0.876309821 0.395159577 0.12975957 0.200237558 10.34055829 0.032729796 0.057124122 2.29E-06 5.639844443 -0.233380042 S(ph)PGMEPPFSHR ddPTM_A459_MK2206_30min_R1 1 SPGMEPPFSHR 11 0 G3V470;Q99973-2;Q99973 G3V470 TEP1 Telomerase protein component 1 1 S(1)PGMEPPFSHR 101.43 0.0083358 0 2574.1 2353.9 1964.7 1693.8 2791.4 2426.3 2650.7 1527.1 2120 2310.6 TRUE FALSE 2355.159278 2200.660682 1831.341638 1824.256769 2680.212627 2563.675009 2473.876639 1513.748726 2340.381586 2596.854572 0.906927674 0.847433162 0.705215324 0.702487074 1.032099624 0.987223173 0.952643504 0.582916249 0.901237063 1 11.34254951 -4.762070878 9.840368681 0.84674359 0.907192964 0.006631817 0.142200022 0.497830602 990.148263 0.036976999 0.206489008 1.73E-05 4.762070878 0.060449374 S(ph)PGMEPPFSHR ddPTM_A459_MK2206_30min_R2 1 SPGMEPPFSHR 11 0 G3V470;Q99973-2;Q99973 G3V470 TEP1 Telomerase protein component 1 1 S(1)PGMEPPFSHR 80.245 0.029205 2156200 13600 17036 13527 18995 17058 16673 14181 14045 12989 13581 TRUE FALSE 14641.22646 16190.01701 13977.98343 17443.04774 16388.21721 17307.5027 12319.01767 15880.72972 14118.75974 13137.85308 1.114430673 1.232318318 1.063947309 1.327693926 1.247404512 1.317376788 0.937673575 1.208776626 1.07466263 1 13.68144192 S(ph)PGMLEPLGSSR ddPTM_A459_MK2206_30min_R1 4 SPGMLEPLGSSR 12 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR 185.2 0.00010439 445000000 3517.68 3912.46 3692.62 2262.41 3523.27 3232.58 4018.71 2641.6 3305.32 4157.14 TRUE FALSE 3218.482844 3657.758143 3441.975243 2436.66121 3382.930695 3415.605886 3750.629188 2618.50477 3648.919842 4672.157888 0.688864315 0.782884104 0.736699257 0.521528011 0.724061724 0.731055321 0.802761653 0.56044869 0.780992409 1 12.18987331 -8.540516302 23.41967212 1.000000004 0.696416885 0.545975072 0.084559463 1193.519605 1584789.901 0.081873056 0.021139532 2.88E-09 8.540516302 -0.303583119 S(ph)PGMLEPLGSSR ddPTM_A459_MK2206_30min_R2 4 SPGMLEPLGSSR 12 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR 133.88 0.0016794 296463000 98565.7 81812.9 85766.4 102088 86891.6 88776.7 90280.5 57899.6 80472.9 85804.4 TRUE FALSE 106111.9658 77750.19035 88625.80897 93747.08384 83479.79919 92155.15953 78426.5619 65467.27652 87472.28738 83004.60946 1.278386423 0.936697261 1.067721534 1.129420215 1.00572486 1.110241469 0.944845864 0.788718566 1.053824456 1 16.34090383 -7.310956815 6.640810141 0.928108986 1.078321686 0.295167698 0.10474043 0.282200471 30.38941951 0.041869338 0.028267184 4.89E-08 7.310956815 0.1502127 S(ph)PGNLTER ddPTM_A459_MK2206_30min_R2 1 SPGNLTER 8 0 Q9H0F6;Q9H0F6-2 Q9H0F6 SHARPIN Sharpin 1 S(1)PGNLTER 83.081 0.039762 32285000 24076 23354 18733 22421 22609 22114 21852 18458 20754 15665 TRUE FALSE 25919.27707 22194.27432 19357.54887 20589.13258 21721.25706 22955.56377 18982.80615 20870.52398 22559.14541 15153.85233 1.710408449 1.464596185 1.277401181 1.358673169 1.433381861 1.514833539 1.252671976 1.377242137 1.488673963 1 13.88739697 -13.09161502 0.219563872 2.68E-18 1.480357707 0.53311872 0.122260823 65.45245745 1.148665781 30.07710366 0.253559038 8.10E-14 13.09161502 1.480357707 S(ph)PGNLTEREELAGSLAR ddPTM_A459_MK2206_30min_R2 3 SPGNLTEREELAGSLAR 17 1 Q9H0F6;Q9H0F6-2 Q9H0F6 SHARPIN Sharpin 1 S(0.935)PGNLT(0.06)EREELAGS(0.004)LAR;S(0.998)PGNLT(0.002)EREELAGSLAR;S(0.993)PGNLT(0.006)EREELAGS(0.001)LAR 78.674 0.010189 34218500 4760.1 12861 9015 13915.4 19451.9 21001 13930.4 10659.4 18291.3 9996.5 TRUE FALSE 5124.536916 12222.34144 9315.555601 12778.46731 18688.12067 21800.20777 12101.32175 12052.62018 19882.24421 9670.315024 0.529924506 1.263903132 0.963314595 1.321411689 1.932524496 2.254343082 1.251388576 1.246352384 2.056007913 1 13.23934717 -5.941191741 3.479657954 1.649061448 0.953515157 0.374795999 0.404624252 0.260727977 6.45493269 0.120737611 0.183739877 1.15E-06 5.941191741 -0.695546291 S(ph)PGNTSQPPAFFSK ddPTM_A459_MK2206_30min_R1 2 SPGNTSQPPAFFSK 14 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5;H7C184 C9J0Q5;Q9Y618;H7C184 NCOR2 Nuclear receptor corepressor 2 1 S(1)PGNTSQPPAFFSK;S(0.999)PGNT(0.001)SQPPAFFSK 144.41 0.00053006 495600000 12033.8 10705.2 10622.4 8822.9 10738.9 9999.6 11854.8 9793.4 10691 10146.2 TRUE FALSE 11010.26212 10008.28953 9901.381084 9502.441287 10311.14687 10565.76871 11063.98792 9707.777336 11802.36771 11403.18786 0.965542466 0.877674705 0.868299392 0.833314456 0.904233711 0.926562716 0.970253938 0.851321355 1.035005988 1 13.47714958 -8.116126483 0.768447984 1.009424005 0.889049845 0.375194331 0.050680739 0.67668 0.834739088 0.047971014 0.019709669 7.65E-09 8.116126483 -0.120374161 S(ph)PGNTSQPPAFFSK ddPTM_A459_MK2206_30min_R2 4 SPGNTSQPPAFFSK 14 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5;H7C184 C9J0Q5;Q9Y618;H7C184 NCOR2 Nuclear receptor corepressor 2 1 S(1)PGNTSQPPAFFSK;S(1)PGNTSQPPAFFSK;S(0.978)PGNT(0.016)S(0.006)QPPAFFSK;S(1)PGNTSQPPAFFSK 191.96 0.00010888 551134000 780566 766835 769965 909939 731905 688920 858444 680899 637039 799219 TRUE FALSE 840326.7331 728755.089 795635.2488 835594.0729 703166.7322 715137.3333 745729.2716 769894.8372 692447.5007 773140.5495 1.086900349 0.942590696 1.029095226 1.080779004 0.909494053 0.924977139 0.964545544 0.995801912 0.895629522 1 19.56037118 -6.267851919 24.99370462 0.947833456 1.027841554 0.429230565 0.048557992 542.4432723 2114240.38 0.014848545 0.017207535 5.40E-07 6.267851919 0.080008098 S(ph)PGPGPDLYSAPIFSSNYSSR ddPTM_A459_MK2206_30min_R1 2 SPGPGPDLYSAPIFSSNYSSR 21 0 Q8NEA6-2;Q8NEA6 Q8NEA6-2 GLIS3 Zinc finger protein GLIS3 1 S(1)PGPGPDLYSAPIFSSNYSSR;S(1)PGPGPDLYSAPIFSSNYSSR 195.48 1.84E-16 11742000 544.44 490.16 695.56 496.2 384.77 639.68 758.08 250.52 580.29 549.11 TRUE FALSE 498.132519 458.2504949 648.3473251 534.41741 369.4437961 675.8981288 707.5098664 248.3297301 640.6132221 617.1378924 0.807165668 0.742541498 1.050571247 0.865961103 0.598640597 1.095214112 1.146437247 0.402389374 1.038039035 1 9.269449069 S(ph)PGPGPDLYSAPIFSSNYSSR ddPTM_A459_MK2206_30min_R2 2 SPGPGPDLYSAPIFSSNYSSR 21 0 Q8NEA6-2;Q8NEA6 Q8NEA6-2 GLIS3 Zinc finger protein GLIS3 1 S(1)PGPGPDLYSAPIFSSNYSSR;S(1)PGPGPDLYSAPIFSSNYSSR 173.09 9.62E-11 23874000 8884.5 8133 5124.8 6511 8709.5 6255.5 12265.6 5628.6 6507.6 5970.5 TRUE FALSE 9564.704151 7729.127046 5295.658274 5979.030472 8367.521268 6493.557436 10655.11199 6364.277346 7073.619285 5775.683074 1.65602995 1.338218692 0.916888653 1.035207506 1.448750072 1.124292547 1.844822829 1.101909032 1.224724278 1 12.49577586 -8.548965077 1.902375642 1.008600217 1.304473422 0.108244879 0.270461777 0.934405407 7.678773222 0.264764169 0.074553363 2.83E-09 8.548965077 0.295873205 S(ph)PGPGPGPGAGAEPGATGGSSHFISSR ddPTM_A459_MK2206_30min_R1 1 SPGPGPGPGAGAEPGATGGSSHFISSR 27 0 Q9ULI0-2;Q9ULI0;C9JG15 Q9ULI0-2 ATAD2B ATPase family AAA domain-containing protein 2B 1 S(1)PGPGPGPGAGAEPGATGGSSHFISSR 127.4 4.55E-12 6057800 790.62 405.5 449.62 353.48 1404.7 1174.4 1062.4 603.94 216.7 445.4 TRUE FALSE 723.3736173 379.1018763 419.1010471 380.7050908 1348.747824 1240.893513 991.5292345 598.6598163 239.2267405 500.5795146 1.445072354 0.75732599 0.837231718 0.760528707 2.694372792 2.478913893 1.980762707 1.195933511 0.477899581 1 8.967455442 S(ph)PGPGPSQSPR ddPTM_A459_MK2206_30min_R2 2 SPGPGPSQSPR 11 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 S(1)PGPGPSQSPR;S(1)PGPGPSQSPR 122.52 0.0041278 6475500 2551.52 1797.11 4557.1 5578.1 4315.6 6242.4 3067.6 3293.5 3745.8 3701 TRUE FALSE 2746.866333 1707.868131 4709.03144 5122.351387 4146.14786 6479.958906 2664.820435 3723.971758 4071.602913 3580.236673 0.767230377 0.477026601 1.315284957 1.430729824 1.158065301 1.809924733 0.744314044 1.040146811 1.137244066 1 11.80583925 -5.264208278 24.98856965 1.217511079 0.622128466 0.415694758 0.275816294 211.3107563 1907042.662 0.072940599 0.163615187 5.44E-06 5.264208278 -0.595382613 S(ph)PGPIVSR ddPTM_A459_MK2206_30min_R2 1 SPGPIVSR 8 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 S(1)PGPIVSR 94.409 0.022719 4864200 9139.4 7911 9671.3 8292.9 7626.7 8862.4 11212 8466.5 8561 9421.9 TRUE FALSE 9839.119491 7518.151244 9993.736315 7615.343542 7327.237437 9199.664842 9739.850932 9573.10062 9305.620305 9114.464175 1.07950608 0.824859377 1.096469976 0.8355229 0.803913132 1.009347853 1.068614758 1.050319628 1.020972833 1 13.15394213 -6.98172349 24.85375401 1.039143163 0.924546358 0.228421664 0.094255572 316.9530797 431014.6274 0.032636806 0.028777896 1.04E-07 6.98172349 -0.114596805 S(ph)PGPPALK ddPTM_A459_MK2206_30min_R2 1 SPGPPALK 8 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 S(1)PGPPALK 84.615 0.036427 12506000 75428 64721 63924 56701 60149 51912 66878 49703 42267 63440 TRUE FALSE 81202.82567 61507.04925 66055.19426 52068.34692 57787.24804 53887.54754 58096.83827 56199.35276 45943.30726 61369.958 1.323168995 1.00223385 1.076344133 0.848433804 0.941621111 0.878076983 0.946665766 0.915746965 0.748628625 1 15.90524498 -1.522878903 0.731716795 0.895119397 65.63153769 0.716708178 0.077946567 171.4383485 0.798768761 0.028036966 18248.02682 0.029999989 1.522878903 64.7364183 S(ph)PGPPALKHPATK ddPTM_A459_MK2206_30min_R2 1 SPGPPALKHPATK 13 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 S(1)PGPPALKHPATK 87.388 0.013858 14706000 37933 74521 65377 67202 96892 80453 64171 42443 87623 58552 TRUE FALSE 40837.17965 70820.3955 67556.63655 61711.38163 93087.53324 83514.69529 55745.27062 47990.44583 95244.29015 56641.45304 0.720976907 1.250328014 1.19270663 1.089509155 1.643452423 1.474444789 0.984177976 0.847267209 1.681529782 1 15.78957066 -4.76083401 24.83283847 1.241306466 0.72097641 0.253500969 0.267388854 19.92624488 816668.3739 0.06721134 0.388133342 1.73E-05 4.76083401 -0.520330055 S(ph)PGPPPPVGVK ddPTM_A459_MK2206_30min_R1 2 SPGPPPPVGVK 11 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 S(1)PGPPPPVGVK;S(1)PGPPPPVGVK 111.5 0.0082133 12725300 5339.9 5586.9 5661.7 4623.2 4417 4090.6 5007.7 4128.4 5027.6 4469.1 TRUE FALSE 4885.713464 5223.191795 5277.399578 4979.279665 4241.061537 4322.206237 4673.64547 4092.305834 5550.237011 5022.765848 0.972713762 1.039903502 1.050695919 0.991342184 0.844367758 0.86052314 0.930492404 0.814751465 1.105016077 1 12.29426631 -6.051812816 7.60533052 0.913699044 1.022766423 0.218492816 0.080833624 0.357062422 47.08912593 0.022999868 0.030035325 8.88E-07 6.051812816 0.109067379 S(ph)PGPPPPVGVK ddPTM_A459_MK2206_30min_R2 1 SPGPPPPVGVK 11 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 S(1)PGPPPPVGVK 123.67 0.0037948 25522000 127990 171530 156910 164550 133670 124850 166140 113150 106780 129430 TRUE FALSE 137789.0128 163012.0696 162141.3011 151105.7386 128421.4442 129601.2542 144325.6184 127939.0935 116067.5314 125206.7097 1.100492243 1.301943562 1.294988915 1.206850168 1.025675417 1.035098315 1.152698755 1.021822982 0.92700728 1 16.93395235 -6.207241212 4.407374814 1.034322388 1.240351781 0.638455368 0.073230461 0.145558987 6.022062927 0.022873212 0.029415632 6.21E-07 6.207241212 0.206029393 S(ph)PGQMTVPLCIGVSTDK ddPTM_A459_MK2206_30min_R2 1 SPGQMTVPLCIGVSTDK 17 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 S(1)PGQMTVPLCIGVSTDK 132.74 0.00068399 6806100 19150 18506 20809 16491 13972 16040 17814 13443 13207 23021 TRUE FALSE 20616.13872 17587.01895 21502.76167 15143.63255 13423.38908 16650.41344 15475.0004 15200.04626 14355.72099 22269.82666 0.925743116 0.789724106 0.965555862 0.680006755 0.602761274 0.747666953 0.694886433 0.682539945 0.644626526 1 14.44280271 -5.773226673 24.9956237 0.703554904 0.883279339 0.327705576 0.11038749 217.4489638 461112.6791 0.028914188 0.043278109 1.69E-06 5.773226673 0.179724436 S(ph)PGRGDCSTNSPVGVSK ddPTM_A459_MK2206_30min_R2 2 SPGRGDCSTNSPVGVSK 17 1 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 NSD1 "Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific" 1 S(1)PGRGDCSTNSPVGVSK;S(0.982)PGRGDCS(0.005)T(0.012)NSPVGVSK 110.44 0.0011721 11507400 32534 45646 38875 43941 45408 45137 53480 35596 37700 50391 TRUE FALSE 35024.82805 43379.28602 40171.0731 40350.87974 43625.05376 46854.72016 46458.01176 40248.51942 40979.07785 48746.7458 0.718505974 0.889890911 0.824077022 0.827765609 0.894932637 0.961186627 0.953048475 0.82566577 0.840652585 1 15.57301829 -6.278509081 3.93644778 0.909367633 0.819928493 0.365271307 0.063070963 0.292435752 10.455117 0.020306837 0.024571491 5.27E-07 6.278509081 -0.08943914 S(ph)PGSGSQSSGWHEVEPGMPSPTTLK ddPTM_A459_MK2206_30min_R1 1 SPGSGSQSSGWHEVEPGMPSPTTLK 25 0 A0A590UJA3;S4R3W2;A0A590UJU2;A0A590UK38;B1AKN5;A0A590UK09;B1AKN8;Q12857-2;Q12857-3;Q12857;Q12857-4 A0A590UJA3 NFIA Nuclear factor 1;Nuclear factor 1 A-type 1 S(0.508)PGS(0.13)GS(0.152)QS(0.105)S(0.105)GWHEVEPGMPSPTTLK 98.84 3.28E-06 6046800 2071.1 824.48 1644.5 899.07 2750.4 2767.6 2274.1 1982.4 1157.2 979.87 TRUE FALSE 1894.942069 770.8062021 1532.875922 968.3165272 2640.845744 2924.29912 2122.398938 1965.068086 1277.495081 1101.263693 1.72069785 0.699928824 1.391924506 0.879277627 2.398013991 2.655403187 1.927239544 1.78437562 1.160026512 1 10.10494424 -6.251172569 24.91547966 1.907109754 1.154809977 0.251811686 0.534478069 860.0980205 2087283.611 0.161045392 0.205558305 5.61E-07 6.251172569 -0.752299777 S(ph)PGSGSQSSGWHEVEPGMPSPTTLK ddPTM_A459_MK2206_30min_R2 3 SPGSGSQSSGWHEVEPGMPSPTTLK 25 0 A0A590UJA3;S4R3W2;A0A590UJU2;A0A590UK38;B1AKN5;A0A590UK09;B1AKN8;Q12857-2;Q12857-3;Q12857;Q12857-4 A0A590UJA3 NFIA Nuclear factor 1;Nuclear factor 1 A-type 1 S(0.538)PGS(0.116)GS(0.116)QS(0.116)S(0.116)GWHEVEPGMPSPTTLK;S(0.939)PGS(0.02)GS(0.025)QS(0.008)S(0.008)GWHEVEPGMPSPTTLK;S(0.949)PGS(0.013)GS(0.013)QS(0.013)S(0.013)GWHEVEPGMPSPTTLK 146.03 6.91E-10 16751500 18115.4 39132.5 29088 60386 52128 56406 58209 34561.7 44740 30269 TRUE FALSE 19502.32895 37189.23695 30057.7794 55452.27063 50081.1928 58552.56986 50566.08838 39079.03286 48631.40433 29281.32501 0.666033007 1.270066739 1.026517051 1.893776003 1.710345853 1.999655748 1.726905745 1.334606028 1.66083346 1 14.83769322 -5.747104427 24.78252059 1.656245054 1.015791332 0.476422841 0.300583434 179.0934929 309617.0621 0.079877558 0.13751027 1.79E-06 5.747104427 -0.640453723 S(ph)PGSISYLPSFFTK ddPTM_A459_MK2206_30min_R1 1 SPGSISYLPSFFTK 14 0 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KS29;J3QKP0 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(1)PGSISYLPSFFTK 159.41 0.00029843 2773600 1093.6 908.44 995.27 654.35 1130 1170.5 1160.8 968.09 1051 851.17 TRUE FALSE 1000.583577 849.3003909 927.7138454 704.7481504 1084.989707 1236.772698 1083.36515 959.6260912 1160.255211 956.6193656 1.045957894 0.88781434 0.969783676 0.736706966 1.134191661 1.292857685 1.132493434 1.003143074 1.212870294 1 9.901801187 -6.340212151 12.15052289 1.137896281 0.912777336 0.490132473 0.109297403 0.866973782 132.1878531 0.033733254 0.038248399 4.57E-07 6.340212151 -0.225118945 S(ph)PGSISYLPSFFTK ddPTM_A459_MK2206_30min_R2 2 SPGSISYLPSFFTK 14 0 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KS29;J3QKP0 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(1)PGSISYLPSFFTK;S(1)PGSISYLPSFFTK 230.57 2.46E-13 90395000 297590 342320 294310 343160 308420 331230 353130 290850 295060 372970 TRUE FALSE 320373.7192 325320.8866 304122.1485 315122.7303 296309.8811 343835.1898 306763.6068 328865.0936 320723.7855 360800.0194 0.887953719 0.90166538 0.842910566 0.873399981 0.821257941 0.952979965 0.85023168 0.91148857 0.888923969 1 18.46083989 -10.02109311 0.431759934 1.028390111 0.872629891 0.518635969 0.034949196 6.688772263 1.156906195 0.310881301 0.020185981 9.53E-11 10.02109311 -0.15576022 S(ph)PGSNSKVPEIEVTVEGPNNNNPQTSAVR ddPTM_A459_MK2206_30min_R2 1 SPGSNSKVPEIEVTVEGPNNNNPQTSAVR 29 1 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347 A0A494C1K3 GTF2I General transcription factor II-I 1 S(0.83)PGS(0.119)NS(0.047)KVPEIEVT(0.004)VEGPNNNNPQTSAVR 43.835 0.029741 5152000 9017.4 12685 12538 11678 11741 9341.2 13533 11130 10717 12822 TRUE FALSE 9707.779077 12055.08135 12956.01066 10723.87004 11279.98935 9696.685912 11756.10084 12584.72922 11649.14529 12403.61919 0.782656975 0.971900311 1.044534701 0.864575885 0.90941113 0.781762626 0.947796015 1.014601385 0.939173084 1 13.59847352 -7.516976266 24.80945895 0.982372101 0.899354399 0.227959751 0.07636272 429.6354859 1805880.563 0.036263156 0.021813093 3.04E-08 7.516976266 -0.083017702 S(ph)PGSPPGPELPIETALDDR ddPTM_A459_MK2206_30min_R1 2 SPGSPPGPELPIETALDDR 19 0 F5GZI3;B1AP52;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.5)PGS(0.5)PPGPELPIETALDDR;S(0.757)PGS(0.243)PPGPELPIETALDDR 161.97 7.94E-07 13414400 3933.8 4546.3 4120.7 3418.7 3785.8 4026.4 5016.3 3830.6 3791.7 4223.7 TRUE FALSE 3599.209653 4250.335044 3840.998365 3682.008866 3635.003569 4254.371288 4681.67178 3797.109468 4185.860784 4746.963843 0.758212991 0.895379696 0.809148435 0.775655553 0.765753372 0.896229975 0.986245511 0.799902758 0.881797486 1 12.21278935 -6.826775608 7.785463933 0.905522463 0.805265077 0.436768214 0.063251304 0.275594186 28.44075211 0.022563469 0.019947231 1.49E-07 6.826775608 -0.100257386 S(ph)PGSPPGPELPIETALDDR ddPTM_A459_MK2206_30min_R2 2 SPGSPPGPELPIETALDDR 19 0 F5GZI3;B1AP52;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.903)PGS(0.097)PPGPELPIETALDDR;S(0.849)PGS(0.151)PPGPELPIETALDDR 118.08 0.0003005 2623100 16127 13981.3 12119.3 15646.2 13097.7 12602.7 16835.6 13208.4 13568.6 14397 TRUE FALSE 17361.69552 13287.00897 12523.35141 14367.85541 12583.41849 13082.30458 14625.0655 14934.78323 14748.7723 13927.22707 1.246601024 0.954031187 0.899199198 1.031637909 0.903512122 0.939333043 1.050106057 1.072344348 1.058988428 1 13.76562042 -9.519201875 8.992403769 0.999999854 1.009335994 0 0.098070141 0 0 0.095908576 0.023261246 3.03E-10 9.519201875 0.00933614 S(ph)PGSPPGPELPIETALDDRER ddPTM_A459_MK2206_30min_R1 3 SPGSPPGPELPIETALDDRER 21 1 F5GZI3;B1AP52;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.843)PGS(0.157)PPGPELPIETALDDRER;S(0.673)PGS(0.327)PPGPELPIETALDDRER;S(0.801)PGS(0.199)PPGPELPIETALDDRER 139.55 1.24E-05 38589600 3213.99 2822.52 2436.07 2431.7 3131.49 2936.93 2831.96 2828 1986.8 1566.87 TRUE FALSE 2940.623273 2638.773435 2270.716356 2618.989955 3006.756122 3103.216439 2643.045116 2803.275094 2193.33497 1760.985685 1.669873468 1.498463876 1.289457589 1.487229554 1.707427918 1.762204239 1.500889609 1.591878411 1.245515502 1 10.78216747 -8.473300105 2.801638779 1.001961632 1.559696253 0.67403951 0.127947948 0.157989712 2.73051328 0.135987307 0.036621441 3.36E-09 8.473300105 0.557734622 S(ph)PGSPPGPELPIETALDDRER ddPTM_A459_MK2206_30min_R2 1 SPGSPPGPELPIETALDDRER 21 1 F5GZI3;B1AP52;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.5)PGS(0.5)PPGPELPIETALDDRER 81.329 0.00098866 5806700 3485 6170.9 2823.7 4991.7 6093.1 5754.8 4722.9 3974.2 4589.6 4076.8 TRUE FALSE 3751.81428 5864.462079 2917.840749 4583.862142 5853.854279 5973.802947 4102.777557 4493.641585 4988.795112 3943.77435 0.951325798 1.487017653 0.739859964 1.162303351 1.484327895 1.514742583 1.040317521 1.139426647 1.264979857 1 11.94536129 -4.496962161 16.20571535 1.206421692 0.280372289 0.094451549 0.234258811 888662.5473 16145124.59 0.059402495 21602819.33 3.18E-05 4.496962161 -0.926049403 S(ph)PGSPVGEGTGSPPK ddPTM_A459_MK2206_30min_R2 1 SPGSPVGEGTGSPPK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 S(0.993)PGS(0.004)PVGEGT(0.001)GS(0.002)PPK 93.243 0.021627 0 13411 8711.9 11539 9673 8342.7 7138.1 9396 8054.4 6828.5 11341 TRUE FALSE 14437.75647 8279.279714 11923.7045 8882.684958 8015.123679 7409.745397 8162.293913 9107.137735 7422.430587 10970.9441 1.315999457 0.754655173 1.086843976 0.809655475 0.730577388 0.675397243 0.743991934 0.830114314 0.676553496 1 13.42140006 -1.536569747 0.876299897 0.778787799 199.9999935 0.530089433 0.135618428 587.8985107 1.491249575 0.044512174 233835.1593 0.029069011 1.536569747 199.2212057 S(ph)PGSQAPDEGAGGALR ddPTM_A459_MK2206_30min_R2 3 SPGSQAPDEGAGGALR 16 0 P10075 P10075 GLI4 Zinc finger protein GLI4 1 S(0.835)PGS(0.165)QAPDEGAGGALR;S(1)PGSQAPDEGAGGALR;S(0.997)PGS(0.003)QAPDEGAGGALR 175.19 1.62E-06 55441900 5648.9 13091.5 7789 17432.9 18892.3 24214.4 18475.6 11135.3 17162.5 12290.5 TRUE FALSE 6081.384127 12441.39515 8048.681372 16008.5763 18150.49338 25135.89596 16049.73153 12590.72194 18655.26323 11889.46199 0.511493635 1.046422046 0.676959258 1.346450858 1.526603423 2.114132328 1.349912346 1.058981639 1.569058654 1 13.53739581 -5.836781524 4.845742352 1.465311617 0.774841592 0.493209282 0.314324295 0.176837624 7.58406936 0.092398865 0.142228256 1.46E-06 5.836781524 -0.690470026 S(ph)PGSSWQEYGPSDTCGSR ddPTM_A459_MK2206_30min_R1 2 SPGSSWQEYGPSDTCGSR 18 0 Q5JSZ5;A0A494C0D3 Q5JSZ5 PRRC2B Protein PRRC2B 1 S(0.995)PGS(0.003)S(0.001)WQEYGPSDTCGSR;S(0.999)PGS(0.001)SWQEYGPSDTCGSR 242.59 3.03E-25 7889900 879.04 1065.88 1113.08 892.34 1020.3 892.75 871.94 1012.18 1032.55 900.62 TRUE FALSE 804.273032 996.4910183 1037.527231 961.0681814 979.6592905 943.2967335 813.7744735 1003.330617 1139.887268 1012.195605 0.794582616 0.984484633 1.025026414 0.949488594 0.967855705 0.931931268 0.803969578 0.991241823 1.126153149 1 9.9832724 -8.002275072 24.9850871 1.061616904 0.929500514 0.361443517 0.074798013 92.93888357 1020655.107 0.042547515 0.019908902 9.95E-09 8.002275072 -0.13211639 S(ph)PGSSWQEYGPSDTCGSR ddPTM_A459_MK2206_30min_R2 1 SPGSSWQEYGPSDTCGSR 18 0 Q5JSZ5;A0A494C0D3 Q5JSZ5 PRRC2B Protein PRRC2B 1 S(1)PGSSWQEYGPSDTCGSR 153.04 7.94E-05 4586300 5728.5 7198.1 5263.9 10991 7929.8 9881.4 6488.6 5334.7 5192.3 5350.3 TRUE FALSE 6167.078364 6840.652821 5439.395799 10093.00014 7618.436208 10257.4436 5636.639026 6031.963607 5643.916868 5175.720149 1.19154015 1.321681355 1.050944727 1.950066822 1.47195675 1.981838914 1.089054057 1.165434651 1.090460208 1 12.3375439 S(ph)PGSTPTTPT(ph)SSQAPQK ddPTM_A459_MK2206_30min_R2 1 SPGSTPTTPTSSQAPQK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5 P35658-4 NUP214 Nuclear pore complex protein Nup214 2 S(0.907)PGS(0.085)T(0.008)PT(0.002)T(0.104)PT(0.726)S(0.148)S(0.021)QAPQK 166.36 6.30E-05 0 24756 25972 21453 29645 21598 20835 25273 16722 18384 19715 TRUE FALSE 26651.33839 24682.26825 22168.23231 27222.90867 20749.954 21627.89052 21954.62474 18907.62282 19983.00709 19071.70116 1.397428481 1.294182833 1.162362608 1.42739803 1.087997018 1.134030485 1.151162372 0.991396764 1.047783148 1 14.21914591 -6.583360335 0.489167161 0.98898029 1.373675731 0.671751294 0.08450716 0.705487915 0.351046289 0.074974059 0.120925478 2.61E-07 6.583360335 0.384695441 S(ph)PGSTPTTPTSSQAPQK ddPTM_A459_MK2206_30min_R1 2 SPGSTPTTPTSSQAPQK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 S(0.891)PGS(0.084)T(0.025)PTTPTSSQAPQK;S(0.994)PGS(0.006)TPTTPTSSQAPQK 287.43 1.35E-75 24561000 5086.1 5351.8 5317.8 4334.8 4547.5 4926.7 6151.4 4890.8 5120 5183.2 TRUE FALSE 4653.500487 5003.396847 4956.842552 4668.667047 4366.363446 5205.645496 5741.05133 4848.040251 5652.242322 5825.333947 0.798838406 0.858903008 0.850911312 0.801441958 0.74954732 0.893621815 0.985531711 0.832233876 0.970286403 1 12.50812504 -6.965440052 8.276947853 0.934003592 0.816417444 0.600955328 0.051660169 0.184449893 38.91626463 0.018133857 0.01590905 1.08E-07 6.965440052 -0.117586148 S(ph)PGSTPTTPTSSQAPQK ddPTM_A459_MK2206_30min_R2 3 SPGSTPTTPTSSQAPQK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 S(0.588)PGS(0.093)T(0.319)PT(0.001)TPTSSQAPQK;S(0.989)PGS(0.011)TPTTPTSSQAPQK;S(0.55)PGS(0.433)T(0.018)PTTPTSSQAPQK 303.96 1.73E-89 209229000 118136 124727 123468 141439 134670 126642 155892 124162 114229 141019 TRUE FALSE 127180.583 118533.2386 127584.3615 129882.9813 129382.1791 131461.4501 135423.1931 140390.3997 124164.4319 136417.5616 0.932288933 0.868900141 0.935248805 0.952098687 0.94842759 0.963669549 0.992710847 1.02912263 0.910179236 1 17.05766985 -5.99403174 0.901473769 0.983066623 0.898130073 0.433371069 0.033125959 0.589089704 0.964734465 0.014723982 0.033752747 1.01E-06 5.99403174 -0.08493655 S(ph)PGTPRPPGASK ddPTM_A459_MK2206_30min_R1 1 SPGTPRPPGASK 12 1 A0A2R8Y4Z8;M0QYB4;Q9Y3X0 A0A2R8Y4Z8;Q9Y3X0 CCDC9 Coiled-coil domain-containing protein 9 1 S(0.805)PGT(0.195)PRPPGASK 73.386 0.029905 31218000 3690.5 4160.6 3288.2 3394.5 4130.9 3424.9 3833.2 3662.3 3393.9 3221.2 TRUE FALSE 3376.603595 3889.744184 3065.006145 3655.944978 3966.357506 3618.814878 3577.494222 3630.280897 3746.70805 3620.266575 0.932694741 1.074435847 0.846624436 1.009855187 1.09559819 0.999599008 0.988185303 1.002766184 1.034926012 1 11.82188022 -5.97298942 24.99993273 1.020874063 0.957681713 0.215488072 0.058868967 357.7315029 331099.9459 0.016265345 0.024124898 1.06E-06 5.97298942 -0.063192349 S(ph)PGTSGEGVSPVITVRPVNVTAEK ddPTM_A459_MK2206_30min_R2 1 SPGTSGEGVSPVITVRPVNVTAEK 24 1 A0A075B6G6;Q7Z7B0-3;Q7Z7B0-2;Q7Z7B0 A0A075B6G6 FILIP1 Filamin-A-interacting protein 1 1 S(0.744)PGT(0.198)S(0.056)GEGVS(0.002)PVITVRPVNVTAEK 64.538 0.0016911 6690700 8221.3 13228 9809.6 11935 8437.7 6593 12169 9736.8 9955.8 8377.8 TRUE FALSE 8850.729049 12571.11676 10136.64717 10959.87232 8106.393502 6843.901235 10571.19568 11009.43319 10821.73749 8104.433072 1.092084908 1.551140795 1.250753394 1.352330536 1.000241896 0.844463909 1.304372013 1.358445815 1.335286181 1 12.98449555 -6.229332851 24.3324343 1.15178552 1.324344547 0.163711319 0.18753519 971.260966 736084.4488 0.058983871 0.07614112 5.90E-07 6.229332851 0.172559027 S(ph)PGVAAAVAEDGGLK ddPTM_A459_MK2206_30min_R1 1 SPGVAAAVAEDGGLK 15 0 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 1 S(1)PGVAAAVAEDGGLK 169.98 5.56E-05 3006700 763.59 744.37 926.78 472.46 769.95 593.03 734.77 797.8 770.98 830.38 TRUE FALSE 698.6426607 695.9113777 863.8727558 508.8489511 739.2812611 626.6068461 685.754834 790.8249187 851.12613 933.2537434 0.748609546 0.745682921 0.925656888 0.5452418 0.792154616 0.671421733 0.734799982 0.847384674 0.911998624 1 9.86612558 -8.186093066 1.632050668 0.989406892 0.736886717 0.491512637 0.090570811 0.312554134 1.517161678 0.082074489 0.025227277 6.51E-09 8.186093066 -0.252520175 S(ph)PGVAAAVAEDGGLK ddPTM_A459_MK2206_30min_R2 2 SPGVAAAVAEDGGLK 15 0 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 1 S(1)PGVAAAVAEDGGLK;S(1)PGVAAAVAEDGGLK 144.47 0.00037319 6611400 27566 23204.5 17108.2 19257.4 21235 24919 25303 21205 17689.1 23866.9 TRUE FALSE 29676.47415 22052.19827 17678.57885 17684.00882 20401.2072 25867.31001 21980.68571 23976.56631 19227.66594 23088.12501 1.285356613 0.955131621 0.765700066 0.765935251 0.883623386 1.120372919 0.952034247 1.038480444 0.832794605 1 14.4948634 S(ph)PGVAAAVAEDGGLKK ddPTM_A459_MK2206_30min_R1 1 SPGVAAAVAEDGGLKK 16 1 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 1 S(1)PGVAAAVAEDGGLKK 97.488 0.0038993 23160000 2636.7 3118.3 2972.3 3283.6 2883.5 2088.7 3083.5 3116.6 2656 2843.7 TRUE FALSE 2412.434819 2915.298103 2770.548557 3536.503441 2768.644089 2206.960389 2877.805341 3089.351895 2932.100705 3195.999025 0.754829648 0.912171149 0.866880289 1.106540839 0.866284397 0.690538505 0.900439994 0.966631051 0.917428535 1 11.64205125 -7.633773283 5.47769039 0.955375736 0.872919033 0.140974947 0.103498905 0.517960966 22.84659344 0.053429248 0.03014399 2.32E-08 7.633773283 -0.082456702 S(ph)PGVAAAVAEDGGLKK ddPTM_A459_MK2206_30min_R2 2 SPGVAAAVAEDGGLKK 16 1 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 1 S(1)PGVAAAVAEDGGLKK;S(1)PGVAAAVAEDGGLKK 130.09 0.00041865 40556000 74254 74504 70397 78553 82494 64795 96369 66366 61252 83621 TRUE FALSE 79938.94333 70804.2397 72744.00084 72134.96862 79254.87106 67260.81913 83715.63454 75040.26407 66579.58824 80892.45362 0.988212618 0.875288566 0.899268072 0.89173916 0.979756053 0.831484473 1.034900424 0.927654691 0.823063033 1 16.3037175 -7.241882216 24.98766627 0.940375793 0.911059044 0.059692664 0.06723834 3121.026944 3987659.283 0.025139495 0.01944556 5.73E-08 7.241882216 -0.029316749 S(ph)PGYEPR ddPTM_A459_MK2206_30min_R1 1 SPGYEPR 7 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 S(1)PGYEPR 88.177 0.03262 16585000 2955.2 2728.6 2344.7 2441.8 2972.4 2764.7 2640.4 2363.1 2095 1968.6 TRUE FALSE 2703.844722 2550.967644 2185.548297 2629.867859 2854.003014 2921.234925 2464.263734 2342.439666 2312.782747 2212.48503 1.222084979 1.152987527 0.987825123 1.188648883 1.289953593 1.320341103 1.113799054 1.058736956 1.045332608 1 11.11145198 -7.605221097 3.741326502 1.039294891 1.18849926 0.407751435 0.08543705 0.283154555 7.750151649 0.049456123 0.027042053 2.48E-08 7.605221097 0.14920437 S(ph)PGYEPR ddPTM_A459_MK2206_30min_R2 1 SPGYEPR 7 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 S(1)PGYEPR 83.647 0.038904 36045000 28059 28743 30642 39571 31887 36337 33609 25663 24526 27598 TRUE FALSE 30207.21861 27315.66442 31663.58899 36337.92272 30634.95616 37719.83 29196.09793 29017.24221 26659.22715 26697.47952 1.131463313 1.023155178 1.186014169 1.361099376 1.147484958 1.412861089 1.093590049 1.0868907 0.998567192 1 14.70441592 -7.507697745 23.92602488 1.043685352 1.208768299 0.371773304 0.107410928 483.4939918 762016.9602 0.049097268 0.031805106 3.11E-08 7.507697745 0.165082947 S(ph)PGYESESSR ddPTM_A459_MK2206_30min_R1 1 SPGYESESSR 10 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 S(1)PGYESESSR 140.63 0.0013973 15260000 378.87 456.52 320.89 256.91 392.04 313.4 454.2 350.34 384.62 389.41 TRUE FALSE 346.645117 426.800465 299.1088809 276.6972527 376.4242166 331.1444372 423.9011467 347.2770143 424.6026254 437.6530507 0.792054611 0.975202765 0.683438355 0.63222969 0.860097321 0.756636876 0.968578069 0.793498443 0.970180888 1 8.773643817 -7.254682227 24.96127325 0.915855888 0.784088497 0.335937409 0.102025987 740.0205223 2733680.107 0.040948548 0.030978665 5.56E-08 7.254682227 -0.131767392 S(ph)PHEAGFCVYLK ddPTM_A459_MK2206_30min_R1 1 SPHEAGFCVYLK 12 0 Q9NTZ6 Q9NTZ6 RBM12 RNA-binding protein 12 1 S(1)PHEAGFCVYLK 110.98 0.0069919 26444000 841.7 866.2 998.57 619.01 691.81 802.18 808.5 669.02 735.96 1028.4 TRUE FALSE 770.1089951 809.8102226 930.7898506 666.6862575 664.2537428 847.5987384 754.5664402 663.1708287 812.4656757 1155.805956 0.666296095 0.700645483 0.805316711 0.576815039 0.574710434 0.733339999 0.652848721 0.5737735 0.702942974 1 10.17468349 -11.37047863 2.554038499 1.137097971 0.664044608 0.662105336 0.071750433 16190360.11 10250120.55 13546643.76 0.018843688 4.26E-12 11.37047863 -0.473053363 S(ph)PHEAGFCVYLK ddPTM_A459_MK2206_30min_R2 4 SPHEAGFCVYLK 12 0 Q9NTZ6 Q9NTZ6 RBM12 RNA-binding protein 12 1 S(1)PHEAGFCVYLK;S(1)PHEAGFCVYLK;S(1)PHEAGFCVYLK;S(1)PHEAGFCVYLK 138.21 0.00083317 23296200 152654 128331 133663 149083 125646 132217 150509 107962 114175 150731 TRUE FALSE 164341.3076 121958.2692 138119.2577 136902.442 120712.5067 137248.6106 130746.9875 122073.0041 124105.7351 145812.6598 1.127071599 0.836403844 0.947237763 0.938892701 0.827860262 0.941266765 0.896677886 0.837190709 0.851131413 1 17.15375646 -4.752602578 24.99831584 0.89434719 1.127072043 0.604036913 0.055734673 226.0520974 639428.6986 0.013369467 0.156463342 1.77E-05 4.752602578 0.232724852 S(ph)PHQLLSPSSFS(ph)PSATPSQK ddPTM_A459_MK2206_30min_R2 1 SPHQLLSPSSFSPSATPSQK 20 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 2 S(0.541)PHQLLS(0.458)PS(0.004)S(0.011)FS(0.983)PS(0.002)ATPSQK 89.684 0.0043652 0 15995 25801 22511 22966 23554 23097 26802 19898 21549 19686 TRUE FALSE 17219.5895 24519.75986 23261.5055 21089.60434 22629.15161 23975.97252 23282.86521 22498.73692 23423.29307 19043.64743 0.904216987 1.287555861 1.22148373 1.107435139 1.188278227 1.259001071 1.222605348 1.181430028 1.229979349 1 14.2170222 -4.75016515 24.99987627 1.196048117 0.904216353 0.540802969 0.078359135 364.3325924 807832.6409 0.01839176 0.278628507 1.78E-05 4.75016515 -0.291831764 S(ph)PHQLLSPSSFSPSATPSQK ddPTM_A459_MK2206_30min_R1 1 SPHQLLSPSSFSPSATPSQK 20 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 1 S(0.999)PHQLLSPSSFSPSATPSQK 94.295 0.00074739 15668000 5691.2 4787.8 4932.2 4159.1 5959.2 5721.9 6072.2 5837.5 4737.7 3705.2 TRUE FALSE 5207.133554 4476.11335 4597.416006 4479.434603 5721.832445 6045.869033 5667.134617 5786.463353 5230.200869 4164.228149 1.250443868 1.074896281 1.104025966 1.075693848 1.374043938 1.45185826 1.360908772 1.389564439 1.255983266 1 12.0238334 -6.262452954 24.99862494 1.334970379 1.121007291 0.31130411 0.125900233 90.73122765 2237773.22 0.036491606 0.043735237 5.46E-07 6.262452954 -0.213963088 S(ph)PHQLLSPSSFSPSATPSQK ddPTM_A459_MK2206_30min_R2 1 SPHQLLSPSSFSPSATPSQK 20 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 1 S(0.897)PHQLLS(0.101)PS(0.001)SFSPSATPSQK 80.082 0.0028042 25653000 18444 28100 21469 32513 33349 38313 36550 25600 32082 28050 TRUE FALSE 19856.08682 26704.59486 22184.76574 29856.5839 32039.55069 39771.02806 31750.9411 28946.0079 34872.43437 27134.7308 0.731759123 0.984148141 0.817578251 1.10030883 1.180758008 1.465687217 1.170121839 1.066751246 1.285158664 1 14.72785298 -5.910785677 3.078298704 1.20814781 0.856179339 0.5832773 0.131574855 0.179661394 3.421077509 0.039139847 0.061493593 1.23E-06 5.910785677 -0.351968471 S(ph)PIALPVK ddPTM_A459_MK2206_30min_R2 1 SPIALPVK 8 0 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(1)PIALPVK 96.665 0.020894 5232100 39000 38063 31716 33237 30490 33464 39336 31154 29273 41971 TRUE FALSE 41985.86999 36172.84677 32773.39561 30521.43078 29292.8094 34737.49597 34171.13595 35225.93477 31819.11263 40601.48971 1.034096785 0.890924127 0.807196875 0.751731796 0.721471296 0.855571956 0.841622714 0.867602027 0.78369323 1 15.30924504 -4.831174535 2.530044301 0.819188241 1.067194165 0.419909903 0.072492346 0.408977039 3.675989131 0.018600122 0.211816842 1.48E-05 4.831174535 0.248005924 S(ph)PIINESR ddPTM_A459_MK2206_30min_R1 3 SPIINESR 8 0 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(1)PIINESR;S(1)PIINESR;S(1)PIINESR 111.5 0.011574 57613000 2477.64 2488.55 2499.3 2509.85 2650.39 2081.74 2967.52 2671.13 2468.24 2556.56 TRUE FALSE 2266.903707 2326.544943 2329.654479 2703.159082 2544.819354 2199.60632 2769.562155 2647.776592 2724.822381 2873.285954 0.788958615 0.809715768 0.810797991 0.940790136 0.885682593 0.765536864 0.963900635 0.921515169 0.948329691 1 11.48848586 -1.522878745 0.099279719 1.081284412 0.224283449 0.56559629 0.052128615 101.9733118 0.721022984 0.716317422 11.89982771 0.03 1.522878745 -0.857000962 S(ph)PIINESR ddPTM_A459_MK2206_30min_R2 3 SPIINESR 8 0 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(1)PIINESR;S(1)PIINESR;S(1)PIINESR 103.21 0.015596 70868000 9140.2 23485 16986.7 26026.3 22834.5 22556.1 21621.8 9224.2 24996.8 13405.1 TRUE FALSE 9839.98074 22318.76905 17553.0281 23899.86804 21937.9028 23414.48819 18782.83169 10429.83461 27170.97648 12967.69268 0.758807367 1.721105643 1.35359686 1.843031649 1.691735248 1.805601718 1.44843282 0.804293783 2.095282263 1 13.66263419 -11.17621111 2.78451054 0.945148002 1.506866463 0.117280149 0.413359977 144100437.4 130339271.8 56431149.7 0.103722499 6.66E-12 11.17621111 0.561718461 S(ph)PILEEK ddPTM_A459_MK2206_30min_R1 3 SPILEEK 7 0 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-2;F5GXF5;A0A0A0MR81 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 S(1)PILEEK;S(1)PILEEK;S(1)PILEEK 97.565 0.022419 171692000 15096.6 18060.4 14526 12840.4 13594.6 13900.3 15188 12148 15885.4 14376.1 TRUE FALSE 13812.55489 16884.66468 13540.01559 13829.36983 13053.09829 14687.32297 14174.83623 12041.79132 17536.74418 16157.1198 0.854889675 1.045029367 0.838021613 0.855930389 0.807885221 0.909031013 0.877312071 0.745293187 1.085388014 1 13.97988242 -8.279820407 24.9884868 1.042694039 0.871112905 0.465298765 0.075356352 857.1088095 1165203.817 0.072362787 0.018828333 5.25E-09 8.279820407 -0.171581133 S(ph)PILEEK ddPTM_A459_MK2206_30min_R2 4 SPILEEK 7 0 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-2;F5GXF5;A0A0A0MR81 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 S(1)PILEEK;S(1)PILEEK;S(1)PILEEK;S(1)PILEEK 98.044 0.022111 211658000 710420 679040 680420 686252 604906 558970 756640 632550 471417 756070 TRUE FALSE 764810.3014 645319.861 703104.8632 630183.0164 581154.351 580241.995 657292.2591 715226.4569 512419.9985 731399.4978 1.045680649 0.882308318 0.961314392 0.861612591 0.794578548 0.793331137 0.898677482 0.977887542 0.700602065 1 19.48030011 -1.522901499 0.865611652 0.86126638 70.56318609 0.254346266 0.088223277 1016.06733 2.623165359 0.029188403 139615.8874 0.029998428 1.522901499 69.70191971 S(ph)PILEEKDIPPLEFPK ddPTM_A459_MK2206_30min_R1 2 SPILEEKDIPPLEFPK 16 1 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-2;F5GXF5;A0A0A0MR81 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 S(1)PILEEKDIPPLEFPK;S(1)PILEEKDIPPLEFPK 88.781 0.0075185 29019000 12452.4 13469.8 12965.6 15653.9 13742.9 11647 7644.7 13693.7 6792.2 2653 TRUE FALSE 11393.25799 12592.91357 12085.5312 16859.56609 13195.49119 12306.44307 7134.736012 13573.97742 7498.273496 2981.673669 3.82109488 4.223437897 4.053270927 5.654396812 4.42553165 4.127360818 2.392862802 4.55246916 2.51478677 1 11.54190665 -8.701417694 0.549967357 0.914294686 4.446057154 0.645714215 0.754466482 0.758003049 0.508588939 0.907871778 0.376943089 1.99E-09 8.701417694 3.531762467 S(ph)PILEEKDIPPLEFPK ddPTM_A459_MK2206_30min_R2 1 SPILEEKDIPPLEFPK 16 1 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-2;F5GXF5;A0A0A0MR81 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 S(1)PILEEKDIPPLEFPK 61.684 0.037498 3677200 10181 34665 19949 28704 34678 28124 36471 17400 32414 16686 TRUE FALSE 10960.46519 32943.58651 20614.0897 26358.79138 33316.36748 29194.27853 31682.31389 19674.23974 35233.31113 16141.53719 0.679022392 2.040920027 1.277083432 1.632979008 2.064014542 1.808643018 1.962781706 1.218857877 2.182772974 1 13.97849036 -5.943741128 6.522423657 1.745011368 1.407708115 0.107278771 0.46109237 0.478568901 42.04231726 0.122653382 0.182572145 1.14E-06 5.943741128 -0.337303253 S(ph)PILLPK ddPTM_A459_MK2206_30min_R2 2 SPILLPK 7 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 S(1)PILLPK;S(1)PILLPK 101.72 0.019741 134484000 237573 206362 203754 208316 190141 153786 225500 184149 169436 241477 TRUE FALSE 255761.7715 196114.3632 210547.0567 191295.9164 182675.109 159638.434 195891.5791 208217.9066 184173.237 233597.6253 1.094881728 0.839539199 0.901323618 0.818912077 0.78200756 0.683390654 0.83858549 0.891352839 0.788420845 1 17.83366608 -2.268063347 1.270948733 0.822376913 199.8486482 0.464489985 0.080919464 916.8757977 2.693239782 0.023387597 530654.7403 0.005394319 2.268063347 199.0262713 S(ph)PISDNSGCDAPGNSNPSLSVPSSAESEK ddPTM_A459_MK2206_30min_R1 3 SPISDNSGCDAPGNSNPSLSVPSSAESEK 29 0 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 S(0.954)PIS(0.046)DNS(0.001)GCDAPGNSNPSLSVPSSAESEK;S(0.952)PIS(0.048)DNSGCDAPGNSNPSLSVPSSAESEK;S(0.995)PIS(0.004)DNSGCDAPGNSNPSLSVPSSAESEK 155.9 8.55E-19 26338800 7277.3 7455.1 6454.75 5359.82 5863.74 5421.27 6796.2 5859.15 7196.9 7379.5 TRUE FALSE 6658.32742 6969.771635 6016.619554 5772.634265 5630.174819 5728.217622 6342.837898 5807.924069 7945.043509 8293.728172 0.802814763 0.840366538 0.725442097 0.696024049 0.678847281 0.6906686 0.764775233 0.700279048 0.957958031 1 13.01780505 -8.32030928 5.146328906 0.990938395 0.736419299 0.788269321 0.050139543 0.105764795 5.72842664 0.052708359 0.014066151 4.78E-09 8.32030928 -0.254519096 S(ph)PISFLSK ddPTM_A459_MK2206_30min_R1 1 SPISFLSK 8 0 Q7RTP6;A0A5F9ZHV5;J3KSK6;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 S(1)PISFLSK 94.409 0.022719 6613000 3469.7 2908.6 2641.1 2258.9 2438.8 2391.7 2687.3 2543.9 2852.7 3005.5 TRUE FALSE 3174.583795 2719.249611 2461.829491 2432.880869 2341.657432 2527.115987 2508.03512 2521.658951 3149.248373 3377.84403 0.939825453 0.805025213 0.728816804 0.720246657 0.693240248 0.748144664 0.742495834 0.746529126 0.932324982 1 11.721887 -8.378755635 3.4730051 0.996617178 0.760084119 0.608218007 0.065182056 0.1600959 3.362556033 0.065965313 0.017627228 4.18E-09 8.378755635 -0.236533059 S(ph)PISFLSK ddPTM_A459_MK2206_30min_R2 1 SPISFLSK 8 0 Q7RTP6;A0A5F9ZHV5;J3KSK6;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 S(1)PISFLSK 94.409 0.022719 5797500 37791 29099 31427 35595 28627 28527 39433 29912 23167 32987 TRUE FALSE 40684.30802 27653.98597 32474.76049 32686.77464 27502.96014 29612.61497 34255.39973 33821.6011 25182.02378 31910.63689 1.274945033 0.866607146 1.017678231 1.024322227 0.861874372 0.927985708 1.073479036 1.059884866 0.789141999 1 14.96174978 -4.750278935 24.99922385 0.96337954 1.274945706 0.5277436 0.089843346 405.3528401 907925.9569 0.022164243 0.332599631 1.78E-05 4.750278935 0.311566167 S(ph)PISPELHSAPLTPVAR ddPTM_A459_MK2206_30min_R1 4 SPISPELHSAPLTPVAR 17 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 S(1)PISPELHSAPLTPVAR;S(1)PISPELHSAPLTPVAR;S(0.999)PIS(0.001)PELHSAPLTPVAR;S(1)PISPELHSAPLTPVAR 182.57 6.82E-14 12953200 1902.92 1809.31 1463.61 1549.65 1778.06 1487.18 1968.82 1450.3 1924.6 1619.13 TRUE FALSE 1741.066661 1691.52359 1364.264231 1669.004312 1707.236105 1571.382846 1837.48361 1437.62018 2124.669057 1819.720048 0.956777205 0.929551549 0.749711052 0.917176416 0.938186127 0.863529996 1.0097617 0.790022719 1.167580178 1 10.8295008 -8.265508155 24.9999625 1.08379009 0.895735571 0.458841151 0.082286368 318.7627626 1958548.542 0.066884581 0.019780691 5.43E-09 8.265508155 -0.188054519 S(ph)PISPELHSAPLTPVAR ddPTM_A459_MK2206_30min_R2 2 SPISPELHSAPLTPVAR 17 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 S(0.948)PIS(0.052)PELHSAPLTPVAR;S(0.871)PIS(0.129)PELHSAPLTPVAR 95.197 0.0042937 38209000 45662 45431 39662 62765 43739 48241 56652 44268 51398 53665 TRUE FALSE 49157.91783 43174.9626 40984.31128 57636.89872 42021.58709 50076.84506 49213.52435 50053.97959 55868.50513 51913.91544 0.94691216 0.83166454 0.789466773 1.11023987 0.809447462 0.964613141 0.94798329 0.964172692 1.076175909 1 15.66383368 -7.51483062 0.796550437 1.032707451 0.892499803 0.232294704 0.089226079 0.965173886 1.149085872 0.076961522 0.03949968 3.06E-08 7.51483062 -0.140207648 S(ph)PISVPGGSALISNLGK ddPTM_A459_MK2206_30min_R1 2 SPISVPGGSALISNLGK 17 0 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 S(1)PISVPGGSALISNLGK;S(0.988)PIS(0.012)VPGGSALISNLGK 245.97 7.56E-24 89170000 9138.6 8805.5 8714.1 6218.5 7280.5 7118.5 9590.1 6779.8 9974.8 11389.4 TRUE FALSE 8361.314081 8232.26035 8122.611171 6697.449947 6990.502268 7521.543318 8950.361927 6720.524923 11011.71616 12800.40486 0.653207002 0.643124998 0.634558927 0.523221728 0.546115716 0.587601986 0.699224909 0.525024403 0.860263115 1 13.64390182 -8.442166633 3.815886459 0.997439769 0.602947514 0.851358063 0.056246274 0.074351306 1.990614429 0.055864849 0.01471114 3.61E-09 8.442166633 -0.394492255 S(ph)PISVPGGSALISNLGK ddPTM_A459_MK2206_30min_R2 2 SPISVPGGSALISNLGK 17 0 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 S(0.963)PIS(0.037)VPGGSALISNLGK;S(1)PISVPGGSALISNLGK 179.74 8.04E-08 91210000 93889 81856 83060 85499 71968 72354 95363 72827 56362 89437 TRUE FALSE 101077.214 77791.15007 85829.17894 78513.4582 69142.17471 75107.48217 82841.72355 82345.73895 61264.26488 86518.67801 1.16827044 0.899125505 0.992030633 0.907474085 0.799158937 0.86810714 0.957501033 0.951768345 0.708104496 1 16.400724 -2.023083292 1.146206208 0.888476038 200 0.463432793 0.086101359 1007.234991 2.416514924 0.024945156 525955.797 0.009482366 2.023083292 199.111524 S(ph)PKPAAPAAPPFSSSSGVLGTGLCELDR ddPTM_A459_MK2206_30min_R1 2 SPKPAAPAAPPFSSSSGVLGTGLCELDR 28 1 O43294-2;O43294;H3BQC4;H3BSN4;H3BS04;H3BN49 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 S(0.982)PKPAAPAAPPFS(0.011)S(0.004)S(0.002)S(0.001)GVLGTGLCELDR;S(1)PKPAAPAAPPFSSSSGVLGTGLCELDR 130.49 1.67E-12 149492000 6239.5 6395.6 6354.3 4715.6 5006.3 5136 6126.2 5545.9 6740.4 7674.9 TRUE FALSE 5708.79776 5979.245278 5922.98782 5078.796329 4806.88847 5426.795882 5717.532376 5497.412781 7441.088701 8625.724555 0.661833997 0.693187597 0.686665541 0.588796489 0.557273588 0.629140874 0.662846621 0.637327652 0.862662453 1 13.07442993 -8.426910245 2.581615956 0.998675906 0.637289668 0.898929055 0.040359772 0.082883037 1.131461298 0.043870778 0.011977175 3.74E-09 8.426910245 -0.361386238 S(ph)PKPAAPAAPPFSSSSGVLGTGLCELDR ddPTM_A459_MK2206_30min_R2 2 SPKPAAPAAPPFSSSSGVLGTGLCELDR 28 1 O43294-2;O43294;H3BQC4;H3BSN4;H3BS04;H3BN49 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 S(1)PKPAAPAAPPFSSSSGVLGTGLCELDR;S(0.999)PKPAAPAAPPFSSSSGVLGTGLCELDR 96.351 6.85E-07 170916000 292445 245175 230248 239277 227015 195688 246179 187507 184232 253035 TRUE FALSE 314834.8141 232999.966 237924.3534 219727.3037 218101.2504 203135.044 213855.4016 212014.8087 200256.1663 244778.4887 1.286202949 0.951880892 0.971998621 0.897657735 0.891014777 0.82987294 0.873669099 0.866149676 0.818111785 1 17.90111725 -1.727479404 0.963662877 0.875507326 199.9992522 0.830020446 0.053060756 300.0066186 0.763042385 0.016144212 131365.9129 0.018729259 1.727479404 199.1237448 S(ph)PLACDDCSLR ddPTM_A459_MK2206_30min_R2 1 SPLACDDCSLR 11 0 Q9NRR6-2;Q9NRR6 Q9NRR6-2 INPP5E 72 kDa inositol polyphosphate 5-phosphatase 1 S(1)PLACDDCSLR 87.216 0.032367 2805500 5665.4 8675.5 4987.3 11352 10677 8219.9 8325.4 5369.4 7794.7 7830.2 TRUE FALSE 6099.14738 8244.687285 5153.574093 10424.50529 10257.76733 8532.714054 7232.264979 6071.199016 8472.668916 7574.701215 0.805199731 1.088450495 0.68036665 1.376226598 1.354214119 1.12647533 0.954792113 0.801510032 1.118548267 1 12.88697327 -5.749262589 24.99999407 1.101345491 0.88105022 0.264036403 0.187382507 382.1193406 784516.7412 0.055684945 0.095540166 1.78E-06 5.749262589 -0.220295271 S(ph)PLAQMEEER ddPTM_A459_MK2206_30min_R1 2 SPLAQMEEER 10 0 E7EPK1;G3V1Q4;Q16181;Q16181-2;E7ES33;A0A0U1RRM2 E7EPK1 Sep-07 Septin-7 1 S(1)PLAQMEEER;S(1)PLAQMEEER 154.23 0.00056513 19438200 1123.61 1125.12 1046.1 673.59 1079.89 787.21 1074.77 845.71 681.21 896.11 TRUE FALSE 1028.041069 1051.874484 975.0936466 725.4700185 1036.875695 831.7811499 1003.074054 838.3160466 752.0242172 1007.126872 1.020766199 1.044430958 0.968193456 0.720336274 1.029538307 0.825895101 0.995975862 0.832383754 0.746702564 1 9.976029722 -5.530670325 24.84464251 0.877877621 1.026027022 0.285190836 0.09951204 194.1632158 619117.0367 0.0259571 0.04506572 2.95E-06 5.530670325 0.148149401 S(ph)PLAQMEEER ddPTM_A459_MK2206_30min_R2 4 SPLAQMEEER 10 0 E7EPK1;G3V1Q4;Q16181;Q16181-2;E7ES33;A0A0U1RRM2 E7EPK1 Sep-07 Septin-7 1 S(1)PLAQMEEER;S(1)PLAQMEEER;S(1)PLAQMEEER;S(1)PLAQMEEER 157.5 0.0004911 33071100 19511.5 21109.4 23225.38 16237.06 16576 17645.1 19951.4 14168.8 11818.72 23923.16 TRUE FALSE 21005.31544 20061.13789 23999.70258 14910.44026 15925.14295 18316.59665 17331.75721 16020.71081 12846.6909 23142.54925 0.907649162 0.866850824 1.037037982 0.644286854 0.688132616 0.791468409 0.748913053 0.692262146 0.555111313 1 14.49826017 -5.766624597 24.99999662 0.720054136 0.930146479 0.394168113 0.11618049 118.961191 573562.5863 0.031182619 0.047855184 1.71E-06 5.766624597 0.210092343 S(ph)PLAQMEEERR ddPTM_A459_MK2206_30min_R1 2 SPLAQMEEERR 11 1 E7EPK1;G3V1Q4;Q16181;Q16181-2;E7ES33;A0A0U1RRM2 E7EPK1 Sep-07 Septin-7 1 S(1)PLAQMEEERR;S(1)PLAQMEEERR 132.17 0.0010589 106137000 2346.18 2496.77 2464.3 2095.45 2107.36 2486.8 2637 2319.67 1986.13 1948.69 TRUE FALSE 2146.625071 2334.229819 2297.030182 2256.841922 2023.419389 2627.600467 2461.090541 2299.38937 2192.595321 2190.108429 0.980145568 1.065805596 1.048820301 1.030470406 0.923890051 1.199758164 1.123729998 1.049897502 1.001135511 1 11.09678658 -6.746469037 24.99969256 1.081074484 1.016249603 0.190188171 0.065873613 435.1575512 726689.8661 0.022573314 0.022487247 1.79E-07 6.746469037 -0.064824881 S(ph)PLAQMEEERR ddPTM_A459_MK2206_30min_R2 6 SPLAQMEEERR 11 1 E7EPK1;G3V1Q4;Q16181;Q16181-2;E7ES33;A0A0U1RRM2 E7EPK1 Sep-07 Septin-7 1 S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR 101.45 0.0078335 219760300 88548.4 86696 95214.9 96396.5 92291.4 92901.6 116154.6 97936.2 73818.9 90589.6 TRUE FALSE 95327.73359 82390.80271 98389.31724 88520.59759 88667.57591 96437.03549 100903.3615 110736.7976 80239.53449 87633.66877 1.087798045 0.940172925 1.122734203 1.010120868 1.011798058 1.100456444 1.151422312 1.263633021 0.915624504 1 16.41919764 -6.808188049 7.958023898 1.107092868 1.032870883 0.045091318 0.097612971 0.545826742 80.85051473 0.033217711 0.029457515 1.56E-07 6.808188049 -0.074221985 S(ph)PLDPDSGLLSCTLPNGFGGQSGPEGER ddPTM_A459_MK2206_30min_R1 1 SPLDPDSGLLSCTLPNGFGGQSGPEGER 28 0 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 S(0.903)PLDPDS(0.096)GLLSCTLPNGFGGQSGPEGER 105.9 7.85E-10 3119100 904.23 729.35 983.16 836.49 852.57 751.04 1061.7 797.95 993.85 1115.6 TRUE FALSE 827.3204902 681.8691824 916.4258384 900.9166047 818.6103316 793.5632358 990.8759302 790.9736073 1097.164264 1253.80895 0.659845736 0.543838184 0.73091346 0.718543766 0.652898778 0.632921974 0.790292596 0.630856565 0.875064948 1 10.29210182 -8.44762974 3.187657817 0.998859378 0.671494334 0.748218951 0.063879085 0.110720069 2.261204913 0.061978057 0.016525974 3.57E-09 8.44762974 -0.327365044 S(ph)PLDPDSGLLSCTLPNGFGGQSGPEGER ddPTM_A459_MK2206_30min_R2 1 SPLDPDSGLLSCTLPNGFGGQSGPEGER 28 0 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 S(0.958)PLDPDS(0.037)GLLS(0.002)CT(0.002)LPNGFGGQSGPEGER 68.153 0.0056633 0 3003.1 2969 2566.3 3279.7 2864.1 2627.2 2844.5 2354.8 2094.7 3352.5 TRUE FALSE 3233.019645 2821.563777 2651.859161 3011.738019 2751.641043 2727.179937 2471.013733 2662.580445 2276.89322 3243.1082 0.996889233 0.870018391 0.817690622 0.92865789 0.848457983 0.840915495 0.761927627 0.820996489 0.702071309 1 11.66316144 -6.659141319 2.083721318 0.806999775 0.895012098 0.146415655 0.083410019 0.546611898 4.86182694 0.030648582 0.030195306 2.19E-07 6.659141319 0.088012322 S(ph)PLEATR ddPTM_A459_MK2206_30min_R1 2 SPLEATR 7 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 S(1)PLEATR;S(1)PLEATR 117.53 0.011532 22243700 1869.49 1937.65 1944.45 1700.36 1647.44 1812.45 2203.49 1490.3 1919.46 2517.4 TRUE FALSE 1710.480058 1811.508633 1812.466152 1831.322022 1581.818976 1915.069353 2056.499203 1477.270464 2118.994736 2829.274517 0.604564897 0.640273194 0.640611627 0.647276187 0.55908996 0.676876472 0.726864498 0.52213755 0.748953388 1 11.46621645 -8.566070846 7.644413478 0.999997654 0.631614009 0.8140733 0.054316547 0.288116445 50.68657079 0.050570294 0.013075084 2.72E-09 8.566070846 -0.368383645 S(ph)PLEATR ddPTM_A459_MK2206_30min_R2 1 SPLEATR 7 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 S(1)PLEATR 85.862 0.035661 26935000 16333 12581 13536 13580 13748 12780 14964 8352.7 10788 16333 TRUE FALSE 17583.46704 11956.24583 13987.28348 12470.47056 13208.18444 13266.35186 12999.20883 9444.426569 11726.32074 15800.05555 1.112873748 0.75672176 0.885267994 0.789267514 0.835958102 0.839639571 0.822731843 0.597746416 0.742169589 1 13.94764201 -4.756686162 24.99941015 0.799347485 1.112874223 0.461670013 0.098481098 131.0520382 689182.5738 0.0245184 0.194148264 1.75E-05 4.756686162 0.313526738 S(ph)PLELEPEAK ddPTM_A459_MK2206_30min_R1 4 SPLELEPEAK 10 0 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(1)PLELEPEAK;S(1)PLELEPEAK;S(1)PLELEPEAK;S(1)PLELEPEAK 176.18 6.50E-05 66376500 16835.9 18534.9 18715.3 13937.5 14446 12677 16999.4 14798 17488.3 19565.2 TRUE FALSE 15403.9183 17328.27464 17444.95758 15010.96866 13870.58523 13394.76078 15865.40104 14668.62265 19306.27137 21989.08469 0.700525671 0.788039834 0.793346237 0.682655457 0.630794116 0.609154996 0.721512572 0.66708655 0.877993406 1 14.42449993 -8.460526396 3.251884319 0.998445658 0.700317084 0.754837075 0.056636944 0.119059532 2.61772717 0.061807538 0.016438664 3.46E-09 8.460526396 -0.298128574 S(ph)PLELEPEAK ddPTM_A459_MK2206_30min_R2 3 SPLELEPEAK 10 0 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(1)PLELEPEAK;S(1)PLELEPEAK;S(1)PLELEPEAK 170.4 0.00020597 32238940 221926.6 213085.2 217484.2 192871.1 184450.2 161725.6 217645.1 192274.4 151172.7 234372.7 TRUE FALSE 238917.4711 202503.6988 224735.0147 177112.9142 177207.7584 167880.181 189068.0369 217405.3243 164321.4282 226725.138 1.053775833 0.893168268 0.991222309 0.781178989 0.781597312 0.740456848 0.833908576 0.958893779 0.724760517 1 17.79058483 -5.756087729 24.99468111 0.824051854 0.970766781 0.352862935 0.091134568 144.0797097 672909.1097 0.024247455 0.040478465 1.75E-06 5.756087729 0.146714927 S(ph)PLGEAPPGTPPCR ddPTM_A459_MK2206_30min_R1 2 SPLGEAPPGTPPCR 14 0 M0QXZ5;Q96B54 M0QXZ5 ZNF428 Zinc finger protein 428 1 S(1)PLGEAPPGTPPCR;S(1)PLGEAPPGTPPCR 109.99 0.0053104 7696200 1651.3 1644.55 1479.71 1410.52 2002.09 1864.47 2789.5 1762.78 1454.34 1236.79 TRUE FALSE 1510.848264 1537.489496 1379.271408 1519.158495 1922.342516 1970.03468 2603.417545 1747.3682 1605.523847 1390.012882 1.086931123 1.1060973 0.992272392 1.092909651 1.38296741 1.417278002 1.872944904 1.257087774 1.155042423 1 10.44088254 -6.246925 4.871930009 1.391556804 1.063445139 0.271889285 0.21617624 0.233490253 16.17652701 0.067994817 0.084509657 5.66E-07 6.246925 -0.328111665 S(ph)PLGFYVHLK ddPTM_A459_MK2206_30min_R1 2 SPLGFYVHLK 10 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(1)PLGFYVHLK;S(1)PLGFYVHLK 112.64 0.0053662 12992400 14823.2 17182.4 15796.5 12384.6 14923.9 11905.7 15768 13508.3 16608.2 18570.9 TRUE FALSE 13562.409 16063.82264 14724.27759 13338.46404 14329.44946 12579.79045 14716.14549 13390.19836 18334.68182 20871.6033 0.649801973 0.769649672 0.705469407 0.639072325 0.686552406 0.602722765 0.705079781 0.641551019 0.87845105 1 14.34925381 -8.442813456 3.307456874 0.997965224 0.677027714 0.854465207 0.04486294 0.07819561 1.674025603 0.043913812 0.011678395 3.61E-09 8.442813456 -0.32093751 S(ph)PLGFYVHLK ddPTM_A459_MK2206_30min_R2 1 SPLGFYVHLK 10 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(1)PLGFYVHLK 103.46 0.0093902 4118800 40118 37754 39300 39915 36160 33231 40363 34273 28622 40339 TRUE FALSE 43189.46493 35879.19126 40610.24239 36653.81682 34740.17671 34495.62899 35063.28962 38752.59878 31111.48982 39022.74173 1.106776792 0.919443116 1.040681423 0.939293735 0.890254635 0.883987835 0.898534753 0.993077294 0.797265606 1 15.25202752 -5.915840596 4.729412317 0.908653397 1.011424537 0.341436749 0.068867095 0.242659335 9.714088802 0.018488962 0.027939064 1.21E-06 5.915840596 0.10277114 S(ph)PLGGGGGSGASSQAACLK ddPTM_A459_MK2206_30min_R1 2 SPLGGGGGSGASSQAACLK 19 0 J3QQY0;J3KSZ8;Q68DK7;Q68DK7-2 J3QQY0 MSL1 Male-specific lethal 1 homolog 1 S(1)PLGGGGGSGASSQAACLK;S(1)PLGGGGGSGASSQAACLK 228.38 1.54E-23 12321100 1968.72 1682.47 2104.26 1885.93 1425.33 1678.94 1783.51 1810.08 1728.69 1576.41 TRUE FALSE 1801.270026 1572.940897 1961.428694 2031.184655 1368.556088 1774.000132 1664.535302 1794.254661 1908.393512 1771.707572 1.016685854 0.887810676 1.107083768 1.146455932 0.772450324 1.001293983 0.939509052 1.012726191 1.077149266 1 10.79092479 -7.99798651 23.91169335 1.040695676 0.981471379 0.049864097 0.100915478 116.5765507 1384447.604 0.057017195 0.027058365 1.00E-08 7.99798651 -0.059224297 S(ph)PLGGGGGSGASSQAACLK ddPTM_A459_MK2206_30min_R2 4 SPLGGGGGSGASSQAACLK 19 0 J3QQY0;J3KSZ8;Q68DK7;Q68DK7-2 J3QQY0 MSL1 Male-specific lethal 1 homolog 1 S(1)PLGGGGGSGASSQAACLK;S(1)PLGGGGGSGASSQAACLK;S(1)PLGGGGGSGASSQAACLK;S(1)PLGGGGGSGASSQAACLK 223.54 1.29E-19 35397100 45083.1 44562.8 46361.5 49114.9 48468.9 48287.1 59020.9 45152.3 44826.5 49015.6 TRUE FALSE 48534.6968 42349.87615 47907.16927 45102.05556 46565.76745 50124.69943 51271.38493 51053.86064 48725.42794 47416.22499 1.023588377 0.893151578 1.01035393 0.951194566 0.982063997 1.057121258 1.081304658 1.076717108 1.027610864 1 15.53309319 -6.711772807 4.507734655 1.055741091 0.967199166 0.476790068 0.039777988 0.157484821 6.738063571 0.012905996 0.012545276 1.94E-07 6.711772807 -0.088541925 S(ph)PLGSTASAPAPSALPAPPAPPVFHGMLER ddPTM_A459_MK2206_30min_R2 2 SPLGSTASAPAPSALPAPPAPPVFHGMLER 30 0 E9PRF4;Q15047-3;Q15047;E9PQM8 E9PRF4 SETDB1 Histone-lysine N-methyltransferase SETDB1 1 S(0.498)PLGS(0.167)T(0.167)AS(0.167)APAPS(0.001)ALPAPPAPPVFHGMLER;S(0.931)PLGS(0.035)T(0.033)AS(0.001)APAPSALPAPPAPPVFHGMLER 101.05 2.49E-08 9326800 1968.18 2315.5 2115.9 4295.29 2546.2 3033.6 3960.3 2094.5 722.58 1575.53 TRUE FALSE 2118.865374 2200.515637 2186.44305 3944.351067 2446.223394 3149.045774 3440.307853 2368.258341 785.4287023 1524.120585 1.39022161 1.443793659 1.434560409 2.587952099 1.605006466 2.06613952 2.257241249 1.553852343 0.515332389 1 10.57376133 -8.121893757 4.692516181 0.775780789 1.831259266 0.541937327 0.386288629 0.176809668 5.827536215 0.290741868 0.103665988 7.55E-09 8.121893757 1.055478477 S(ph)PLGSVR ddPTM_A459_MK2206_30min_R1 1 SPLGSVR 7 0 Q92620;J3KSA8;H3BMS7;Q92620-2 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 1 S(1)PLGSVR 96.034 0.023406 5469600 1171.6 890.79 927.22 789.95 1162.5 1145.3 1042.4 924.62 834.79 653.05 TRUE FALSE 1071.949268 832.7994091 864.2828898 850.7920859 1116.195163 1210.145896 972.863398 916.5361448 921.5694078 733.9547643 1.460511356 1.134674028 1.177569698 1.159188723 1.520795583 1.648801745 1.325508663 1.248763806 1.255621535 1 9.519547338 -8.741312743 1.378096069 1.002012956 1.337072537 0.293195053 0.157979208 1.177003609 4.182844715 0.169002626 0.050149849 1.81E-09 8.741312743 0.335059581 S(ph)PLGSVR ddPTM_A459_MK2206_30min_R2 3 SPLGSVR 7 0 Q92620;J3KSA8;H3BMS7;Q92620-2 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 1 S(0.999)PLGS(0.001)VR;S(1)PLGSVR;S(1)PLGSVR 126.24 0.0057671 23835200 26434.2 36444.4 23985.8 47425 46094 45384 42942 28434.7 34514.3 25789 TRUE FALSE 28458.02268 34634.62409 24785.4746 43550.22579 44284.11796 47111.11992 37303.66382 32151.21292 37516.29143 24947.50704 1.14071609 1.388300003 0.993505065 1.745674456 1.775091911 1.888409926 1.495286233 1.288754538 1.503809233 1 14.60660804 -5.763375771 24.99737838 1.564109227 1.19558635 0.275043399 0.258079278 65.02597241 839455.6937 0.073395142 0.115361343 1.72E-06 5.763375771 -0.368522877 S(ph)PLHIKDDVLPK ddPTM_A459_MK2206_30min_R2 1 SPLHIKDDVLPK 12 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(1)PLHIKDDVLPK 56.286 0.046822 11695000 51251 47210 47478 48969 49504 43754 71947 48251 38645 57244 TRUE FALSE 55174.81597 44865.62005 49060.89282 44968.07606 47560.22422 45419.08913 62500.27248 54557.57137 42006.27225 55376.13297 0.996364553 0.810197781 0.885957365 0.812047964 0.858857809 0.820192503 1.12865 0.985218152 0.75856276 1 15.75697669 S(ph)PLIESTANMDNNQSQK ddPTM_A459_MK2206_30min_R1 2 SPLIESTANMDNNQSQK 17 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(1)PLIESTANMDNNQSQK;S(1)PLIESTANMDNNQSQK 270.95 1.18E-51 12007700 3214.9 3149.6 2967.7 2297.61 2618.25 2447 3361.4 2708.6 3536.5 4768.5 TRUE FALSE 2941.455873 2944.560468 2766.260792 2474.57232 2513.959558 2585.547025 3137.167139 2684.918996 3904.13183 5359.25778 0.548855083 0.549434378 0.516164907 0.461737879 0.469087262 0.482444982 0.585373436 0.500987097 0.72848368 1 12.3878175 -8.568902318 2.049878412 1.000102712 0.511103206 0.940387563 0.038319505 0.083500098 0.802201275 0.039169133 0.010889402 2.70E-09 8.568902318 -0.488999506 S(ph)PLIESTANMDNNQSQK ddPTM_A459_MK2206_30min_R2 5 SPLIESTANMDNNQSQK 17 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.976)PLIES(0.009)T(0.015)ANMDNNQSQK;S(1)PLIESTANMDNNQSQK;S(0.997)PLIES(0.003)TANMDNNQSQK;S(0.994)PLIES(0.002)T(0.004)ANMDNNQSQK;S(1)PLIESTANMDNNQSQK 176.68 3.74E-09 22105900 113776 97474.2 96423.4 98289.2 112835 77374.7 118198 84379.5 76033.8 112126 TRUE FALSE 122486.778 92633.77297 99638.10803 90258.65795 108404.5309 80319.24843 102678.4606 95408.19037 82647.08249 108467.3378 1.12925034 0.854024583 0.918600106 0.832127531 0.999420961 0.740492484 0.946630227 0.879602951 0.761953637 1 16.72690115 -4.758019448 24.99059137 0.878607231 1.129250691 0.437384669 0.084266325 85.63593449 625671.4507 0.019309206 0.136911621 1.75E-05 4.758019448 0.25064346 S(ph)PLLAGGS(ph)PPQPVVPAHK ddPTM_A459_MK2206_30min_R2 1 SPLLAGGSPPQPVVPAHK 18 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4;C9JIY9 Q8NFH5-2 NUP35 Nucleoporin NUP53 2 S(1)PLLAGGS(1)PPQPVVPAHK 76.693 0.0371 0 20337 26105 25529 21580 25183 18873 24276 15712 18355 21012 TRUE FALSE 21894.01636 24808.66366 26380.12412 19816.84497 24194.18889 19591.22524 21088.53204 17765.61235 19951.48472 20326.38016 1.077123235 1.220515579 1.297826957 0.97493232 1.190285171 0.963832472 1.037495701 0.874017518 0.981556212 1 14.31106569 -6.661732202 1.014049584 0.95086543 1.18075178 0.464806629 0.092796155 0.435612365 0.96544679 0.048962468 0.049343136 2.18E-07 6.661732202 0.22988635 S(ph)PLLEVK ddPTM_A459_MK2206_30min_R1 1 SPLLEVK 7 0 A0A140T9E6;A2AB20;Q9BW19 A0A140T9E6 KIFC1 Kinesin-like protein KIFC1 1 S(1)PLLEVK 85.67 0.035913 1823700 1946.9 2020.1 2152 1532.4 1598.4 1655.8 1589.9 1673.7 1954.3 1845.2 TRUE FALSE 1781.305931 1888.591123 2005.928236 1650.425714 1534.732343 1749.549965 1483.840672 1659.067017 2157.456479 2073.797307 0.858958552 0.910692244 0.967273045 0.795847168 0.740058992 0.843645596 0.715518661 0.800014067 1.040341055 1 11.01805918 -8.263036852 24.99718049 1.020170552 0.828968687 0.536846512 0.071025764 122.4334333 1915737.783 0.064521662 0.020035276 5.46E-09 8.263036852 -0.191201865 S(ph)PLLEVK ddPTM_A459_MK2206_30min_R2 1 SPLLEVK 7 0 A0A140T9E6;A2AB20;Q9BW19 A0A140T9E6 KIFC1 Kinesin-like protein KIFC1 1 S(1)PLLEVK 95.502 0.023749 1336800 18594 11059 12354 15830 11216 10019 11269 9810.5 7725.1 15568 TRUE FALSE 20017.57094 10509.82614 12765.87619 14536.63836 10775.60348 10400.28007 9789.366764 11092.76603 8397.015234 15060.01743 1.329186438 0.697862814 0.847666761 0.965247114 0.715510691 0.690588846 0.650023601 0.736570597 0.557570087 1 13.87843582 -4.757909944 24.99911617 0.755897764 1.329187244 0.626724525 0.131154806 66.63246574 471887.8022 0.032949205 0.235437704 1.75E-05 4.757909944 0.57328948 S(ph)PLLLGAQR ddPTM_A459_MK2206_30min_R2 3 SPLLLGAQR 9 0 Q96DR7;Q96DR7-4;Q96DR7-3 Q96DR7 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 S(1)PLLLGAQR;S(1)PLLLGAQR;S(1)PLLLGAQR 110.53 0.010796 12305200 12428.8 12053.6 9957.7 15025 10901.1 8628.6 16353.8 11606.1 8677.7 10958.6 TRUE FALSE 13380.35848 11455.03575 10289.68475 13797.40944 10473.06804 8956.967419 14206.52642 13123.05712 9432.47066 10601.02178 1.262176304 1.08055959 0.970631413 1.301516941 0.987930056 0.844915481 1.340109162 1.23790493 0.889769954 1 13.37191571 -14.52269539 0.014860645 6.24E-07 1.940032871 0.058071632 0.165788911 26407.86184 29.65992062 2420.19832 1543.182649 3.00E-15 14.52269539 1.940032247 S(ph)PLLNQPVPELSHASLIANQSPFR ddPTM_A459_MK2206_30min_R2 1 SPLLNQPVPELSHASLIANQSPFR 24 0 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 S(1)PLLNQPVPELSHASLIANQSPFR 63.122 0.0029416 2157800 3832.8 3133.1 3269.3 4286.8 5282.9 5444.8 3751.9 4433.2 4600.1 4249.1 TRUE FALSE 4126.242115 2977.51481 3378.29683 3936.554727 5075.466802 5652.005679 3259.271023 5012.634461 5000.208383 4110.452215 1.003841402 0.724376456 0.821879602 0.957693831 1.234770905 1.375032572 0.792922738 1.219484913 1.216461869 1 12.00508141 -6.042077802 4.109849963 1.144097985 0.84159381 0.402240562 0.160542159 0.215505959 7.826431153 0.048336452 0.066792725 9.08E-07 6.042077802 -0.302504175 S(ph)PLLNSPTVAK ddPTM_A459_MK2206_30min_R2 2 SPLLNSPTVAK 11 0 O43365 O43365 HOXA3 Homeobox protein Hox-A3 1 S(1)PLLNSPTVAK;S(1)PLLNSPTVAK 107.55 0.010479 2529000 19639.3 24979 22438.2 24033 18689.1 19707.2 21164.2 14961.3 11939.6 25760 TRUE FALSE 21142.89991 23738.57918 23186.27839 22069.42702 17955.27203 20457.17131 18385.31512 16916.79328 12978.08483 24919.45331 0.848449589 0.952612358 0.930448919 0.885630465 0.720532341 0.820931786 0.737789665 0.678858925 0.520801346 1 14.6049848 -6.199520028 4.042206614 0.733099769 0.913798088 0.305880642 0.115537729 0.26294191 8.686068326 0.034712852 0.044857502 6.32E-07 6.199520028 0.180698319 S(ph)PLPAGPSSCTSPR ddPTM_A459_MK2206_30min_R1 4 SPLPAGPSSCTSPR 14 0 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(1)PLPAGPSSCTSPR;S(0.999)PLPAGPSSCTSPR;S(1)PLPAGPSSCTSPR;S(1)PLPAGPSSCTSPR 191.19 0.00010534 88416100 2329.72 2714.54 2455.14 2093.18 2193.33 1977.36 2421.66 2205.61 1565.98 2214.54 TRUE FALSE 2131.56508 2537.822953 2288.491937 2254.397086 2105.965022 2089.316414 2260.11548 2186.326584 1728.769225 2488.893934 0.856430662 1.019658941 0.919481504 0.905782707 0.846144945 0.839455786 0.908080272 0.878433008 0.69459337 1 11.28128903 -5.984870853 2.460249174 0.856458172 0.941468719 0.13479233 0.080111497 0.50533456 6.164846613 0.023932729 0.036888166 1.04E-06 5.984870853 0.085010547 S(ph)PLPAGPSSCTSPR ddPTM_A459_MK2206_30min_R2 4 SPLPAGPSSCTSPR 14 0 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(1)PLPAGPSSCTSPR;S(1)PLPAGPSSCTSPR;S(1)PLPAGPSSCTSPR;S(1)PLPAGPSSCTSPR 193.51 0.00011596 151841000 38204.5 36813.7 41777 43448.4 44199.5 37556.1 38005.3 36399.8 32501 41996.6 TRUE FALSE 41129.46589 34985.58519 43169.82433 39898.52674 42464.00555 38985.3237 33015.15846 41157.37884 35327.87823 40626.25438 1.012386362 0.861157045 1.062609019 0.982087257 1.045235555 0.959609107 0.812655731 1.013073429 0.86958246 1 15.31012474 -7.004848289 24.96246994 0.919376653 0.990056189 0.160313816 0.073914702 373.8412922 1924809.492 0.025499533 0.021895377 9.89E-08 7.004848289 0.070679537 S(ph)PLPAPPRPFLYR ddPTM_A459_MK2206_30min_R2 1 SPLPAPPRPFLYR 13 1 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(0.748)PLPAPPRPFLY(0.252)R 83.633 0.016848 71110000 8446.6 9095.6 9883.7 6350.1 8178.9 3455.3 11269 2907.4 3373 11909 TRUE FALSE 9093.27819 8643.92573 10213.21762 5831.276517 7857.75529 3586.793863 9789.366764 3287.407163 3666.377443 11520.41031 0.789318952 0.750314051 0.886532455 0.50616917 0.68207252 0.311342545 0.849741155 0.285355042 0.318250596 1 13.49190448 -5.767982144 24.98212519 0.541137656 0.802881053 0.193442724 0.224662018 220.0003061 840026.5731 0.060445152 0.092082325 1.71E-06 5.767982144 0.261743397 S(ph)PLPGPSEEK ddPTM_A459_MK2206_30min_R2 2 SPLPGPSEEK 10 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 S(1)PLPGPSEEK;S(1)PLPGPSEEK 103.21 0.014461 21066300 87751 67742 70114 72392 59434 53036 80952 63491 42668 81740 TRUE FALSE 94469.28403 64378.03079 72451.56577 66477.34203 57100.32253 55054.32214 70322.90516 71789.4917 46379.18551 79072.83049 1.194712311 0.814161203 0.916263719 0.840710287 0.722123164 0.696248279 0.889343466 0.907890754 0.586537566 1 16.27089445 -2.523744604 1.35732681 0.806741097 199.9959538 0.470356431 0.11755838 646.3218049 3.046786448 0.03237248 398916.4869 0.002994025 2.523744604 199.1892127 S(ph)PLQSQPHSR ddPTM_A459_MK2206_30min_R2 1 SPLQSQPHSR 10 0 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2 Q9UI08-4 EVL Ena/VASP-like protein 1 S(1)PLQSQPHSR 105.46 0.0082667 6614800 5375 7942.8 5725 4962.5 5990 5341.8 5788.2 5660.3 5995.1 5541 TRUE FALSE 5786.514133 7548.372102 5915.868643 4557.047876 5754.802503 5545.085942 5028.202387 6400.120645 6516.542961 5360.197624 1.07953373 1.408226456 1.103666144 0.850164154 1.073617599 1.034492817 0.938062874 1.194008336 1.215728117 1 12.38807048 -5.507797415 24.6329156 1.042778219 1.246896687 0.283818818 0.125592612 666.3413225 1088358.419 0.033473479 0.06611368 3.11E-06 5.507797415 0.204118468 S(ph)PLQSVVVR ddPTM_A459_MK2206_30min_R2 1 SPLQSVVVR 9 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(1)PLQSVVVR 90.434 0.033673 0 2576.9 1442.9 1529.2 2223.7 1973.4 1858.4 2034 1427.2 1786 0 TRUE FALSE 2774.189445 1371.247684 1580.182765 2042.016597 1895.9144 1929.122714 1766.933357 1613.73994 1941.343052 0 0 S(ph)PLSALAR ddPTM_A459_MK2206_30min_R1 4 SPLSALAR 8 0 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(0.999)PLS(0.001)ALAR;S(1)PLSALAR;S(1)PLSALAR;S(1)PLSALAR 114.86 0.010127 72129800 4718.05 4001.06 3410.7 3339 4021.25 3629.93 4232.81 3525.32 3724.25 3390.31 TRUE FALSE 4316.755072 3740.590267 3179.191187 3596.170359 3861.075097 3835.4535 3950.446968 3494.498499 4111.399115 3810.327198 1.132909288 0.981697915 0.834361728 0.943795682 1.013318515 1.006594263 1.036773684 0.917112447 1.079014715 1 11.89569917 -6.27301361 23.41030634 1.005946066 0.963882392 0.042041482 0.0776772 1047.701401 2119100.129 0.024939317 0.028555753 5.33E-07 6.27301361 -0.042063675 S(ph)PLSALAR ddPTM_A459_MK2206_30min_R2 5 SPLSALAR 8 0 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(1)PLSALAR;S(1)PLSALAR;S(1)PLSALAR;S(1)PLSALAR;S(1)PLSALAR 114.86 0.010127 84685800 27468.4 29325.8 25652.7 30773.7 28509.4 36396.9 28843 17237.8 22306.7 26918 TRUE FALSE 29571.40182 27869.52342 26507.94821 28259.39027 27389.97771 37782.00953 25055.87945 19490.83965 24246.89644 26039.66786 1.135628994 1.070271847 1.017983346 1.085243883 1.051855878 1.450940532 0.962219625 0.748505693 0.931152293 1 14.66842343 -7.511709166 24.97985703 0.87496989 1.128095359 0.432489032 0.127351822 493.7890055 1104326.361 0.056605271 0.035574804 3.08E-08 7.511709166 0.253125469 S(ph)PLSGIPVR ddPTM_A459_MK2206_30min_R1 1 SPLSGIPVR 9 0 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 S(1)PLSGIPVR 97.597 0.02045 25564000 1355.8 1102.8 1241.7 1060.5 1359 875.96 1351.2 898.82 993.41 1076.5 TRUE FALSE 1240.48209 1031.00752 1157.416864 1142.179894 1304.868152 925.5560982 1261.063913 890.9617115 1096.678524 1209.864947 1.025306249 0.852167444 0.956649638 0.944055695 1.07852381 0.765007781 1.042317919 0.736414187 0.90644706 1 10.2406303 -6.760590632 24.99999994 0.883080828 0.962387829 0.131401961 0.10246401 48.79844728 1437383.368 0.033149673 0.031336304 1.74E-07 6.760590632 0.079307001 S(ph)PLSGIPVR ddPTM_A459_MK2206_30min_R2 4 SPLSGIPVR 9 0 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 S(0.999)PLS(0.001)GIPVR;S(1)PLSGIPVR;S(0.998)PLS(0.002)GIPVR;S(0.999)PLS(0.001)GIPVR 115.23 0.0082322 122147000 56965.2 71488.5 52411.4 66616.7 68526.1 70230.2 60653.5 38374.3 48962.2 44495.7 TRUE FALSE 61326.49951 67938.48504 54158.76992 61173.90251 65835.421 72902.85947 52689.62259 43389.95277 53220.84365 43043.80895 1.424746113 1.578356718 1.258224382 1.421200958 1.52949803 1.693689784 1.224092939 1.008041663 1.236434343 1 15.39351813 -7.479163861 6.63157005 1.095385221 1.477048959 0.691826386 0.122654834 0.128027135 15.20984389 0.053929542 0.035348657 3.32E-08 7.479163861 0.381663738 S(ph)PLSPTETFSWPDVR ddPTM_A459_MK2206_30min_R1 4 SPLSPTETFSWPDVR 15 0 A1L390-3;A1L390;G3V311;A1L390-2 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(1)PLSPTETFSWPDVR;S(0.973)PLS(0.023)PT(0.004)ETFSWPDVR;S(1)PLSPTETFSWPDVR;S(1)PLSPTETFSWPDVR 221.85 1.56E-09 85838000 2124.19 1870.65 1970.96 1884.41 2700.2 2428.69 2729.99 2556.65 2211.32 1982.09 TRUE FALSE 1943.516486 1748.870345 1837.176727 2029.547585 2592.645316 2566.200329 2547.877348 2534.297479 2441.194627 2227.646273 0.872452916 0.785075425 0.82471654 0.911072646 1.163849641 1.151978373 1.143753108 1.137657046 1.095862775 1 11.12130445 -6.115887716 3.487354171 1.125528368 0.826832672 0.87891447 0.049099364 0.073165462 1.635611635 0.014553371 0.01964232 7.66E-07 6.115887716 -0.298695696 S(ph)PLSPTETFSWPDVR ddPTM_A459_MK2206_30min_R2 5 SPLSPTETFSWPDVR 15 0 A1L390-3;A1L390;G3V311;A1L390-2 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(1)PLSPTETFSWPDVR;S(0.996)PLS(0.004)PTETFSWPDVR;S(0.987)PLS(0.008)PT(0.005)ETFSWPDVR;S(0.997)PLS(0.001)PT(0.003)ETFSWPDVR;S(1)PLSPTETFSWPDVR 155.06 0.00017606 23486700 9896.1 15674.5 15000.7 22044.4 17155.2 20576.71 23277.8 13230.6 17771.7 21729.3 TRUE FALSE 10653.75302 14896.12712 15500.81585 20243.302 16481.60065 21359.77112 20221.3969 14959.88485 19317.45034 21020.27472 0.506832245 0.708655207 0.737422134 0.963036986 0.784081125 1.016150902 0.961994891 0.71168836 0.918991336 1 14.3594939 -4.7856758 0.967375455 0.900855109 0.307234459 0.637817171 0.09523618 1.334625183 0.991867656 0.032231998 0.833461787 1.64E-05 4.7856758 -0.593620651 S(ph)PLSSILFSALDSDTR ddPTM_A459_MK2206_30min_R2 2 SPLSSILFSALDSDTR 16 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;A0A1W2PRR3;I3L233;A0A1W2PPV8 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 S(0.999)PLS(0.001)SILFSALDSDTR;S(1)PLSSILFSALDSDTR 142.54 0.00039411 1892320 0 0 638.19 0 0 0 0 0 0 679.22 TRUE FALSE 0 0 659.4669361 0 0 0 0 0 0 657.057107 0 0 1.00366761 0 0 0 0 0 0 1 9.359874955 -11.04491673 4.321730292 1.007582382 0.118078542 0.442169915 0.299300574 698010885.2 896676439.3 45184933.98 0.075415467 9.02E-12 11.04491673 -0.88950384 S(ph)PLTATPTFVTDSESTR ddPTM_A459_MK2206_30min_R2 2 SPLTATPTFVTDSESTR 17 0 A0A087WUK4;P13056-2;P13056-3;P13056 A0A087WUK4 NR2C1 Nuclear receptor subfamily 2 group C member 1 1 S(0.994)PLT(0.005)AT(0.002)PTFVTDSESTR;S(1)PLTATPTFVTDSESTR 110.57 0.0021174 5738600 6414 7720.9 7424.2 7206.2 8235.1 8340 6418.6 7734.2 4718.7 8032.2 TRUE FALSE 6905.060772 7337.491333 7671.719123 6617.430409 7911.748596 8657.384544 5575.83011 8745.086495 5129.123997 7770.109972 0.888669632 0.944322714 0.987337264 0.851652091 1.018228651 1.114190735 0.717599896 1.125477828 0.660109576 1 12.9237193 -7.252911332 24.97944379 0.886253307 0.964306531 0.091747239 0.139451159 1812.204657 5308128.542 0.050737528 0.03864211 5.59E-08 7.252911332 0.078053224 S(ph)PLTGYVR ddPTM_A459_MK2206_30min_R1 3 SPLTGYVR 8 0 H0YNS8;H0YKM5;Q9NP66 H0YNS8 HMG20A High mobility group protein 20A 1 S(0.998)PLT(0.002)GYVR;S(1)PLTGYVR;S(0.997)PLT(0.003)GYVR 142.98 0.0021804 114984200 1950.05 1956.15 2114.01 1599.62 1731.59 1716.86 1894.92 1710.11 1752.82 2022.68 TRUE FALSE 1784.188007 1828.804279 1970.516891 1722.82301 1662.617104 1814.06713 1768.513344 1695.158689 1935.031912 2273.264869 0.784857071 0.804483589 0.866822392 0.757862858 0.731378524 0.798000776 0.777961851 0.745693435 0.851212693 1 11.15055007 -8.602550518 4.350942069 0.999959238 0.784966103 0.776417417 0.035340823 0.198885108 9.447645984 0.036383301 0.009500605 2.50E-09 8.602550518 -0.214993135 S(ph)PLTGYVR ddPTM_A459_MK2206_30min_R2 2 SPLTGYVR 8 0 H0YNS8;H0YKM5;Q9NP66 H0YNS8 HMG20A High mobility group protein 20A 1 S(1)PLTGYVR;S(0.999)PLT(0.001)GYVR 106.88 0.013539 107583000 25483.4 29447.9 27186.4 28107 28665.1 27451 32396.3 28297.2 23030.7 33472 TRUE FALSE 27434.4287 27985.56011 28092.78101 25810.56819 27539.56414 28495.66704 28142.6269 31995.7412 25033.86866 32379.81138 0.847269565 0.864290399 0.86760175 0.797119164 0.850516509 0.880044257 0.869141162 0.988138591 0.77313201 1 14.98280696 -7.172226071 1.828471504 0.910156156 0.845677637 0.194342328 0.061173665 0.622515475 4.086297734 0.029099202 0.019500956 6.73E-08 7.172226071 -0.06447852 S(ph)PLTQEQLIPNLAMK ddPTM_A459_MK2206_30min_R1 1 SPLTQEQLIPNLAMK 15 0 Q9UNE7;H3BTA3;Q9UNE7-2 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 S(1)PLTQEQLIPNLAMK 220.27 2.15E-09 6293500 1637.9 1891.1 1667 1252.2 1816.5 1610.4 1826.2 1901.2 1697.3 1759.1 TRUE FALSE 1498.588004 1767.989046 1553.848685 1348.644661 1744.144958 1701.579456 1704.37753 1884.578009 1873.740409 1977.030589 0.757999402 0.894264892 0.785950755 0.682156699 0.882204336 0.860674319 0.862089611 0.953236647 0.94775489 1 10.94911948 -7.556026278 0.8061217 0.992488852 0.793919495 0.625229183 0.056477948 0.448585366 0.544144498 0.051440062 0.025616658 2.78E-08 7.556026278 -0.198569357 S(ph)PLTQEQLIPNLAMK ddPTM_A459_MK2206_30min_R2 2 SPLTQEQLIPNLAMK 15 0 Q9UNE7;H3BTA3;Q9UNE7-2 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 S(1)PLTQEQLIPNLAMK;S(1)PLTQEQLIPNLAMK 257.16 3.30E-36 9241400 62244 59749 61023 63038 61006 57827 61394 48769 45764 63293 TRUE FALSE 67009.4485 56781.95154 63057.47636 57887.59375 58610.59791 60027.64701 53332.89405 55143.27575 49744.47 61227.75459 1.094429298 0.927389089 1.029883862 0.945446949 0.957255387 0.980399288 0.871057487 0.900625478 0.812449686 1 15.90189816 -6.454838137 0.721681212 0.889725619 1.018779897 0.349052419 0.06186947 0.799207261 0.923342041 0.03850399 0.054516153 3.51E-07 6.454838137 0.129054278 S(ph)PMCNQPSINK ddPTM_A459_MK2206_30min_R2 1 SPMCNQPSINK 11 0 A0A1B0GW84;Q08499-11;Q08499-2;Q08499-10;A0A087WSZ7;Q08499;Q08499-3;A0A1W2PQN6;Q08499-6;Q08499-7;Q08499-12;Q08499-9 A0A1B0GW84;Q08499-6;Q08499-9 PDE4D "cAMP-specific 3,5-cyclic phosphodiesterase 4D" 1 S(1)PMCNQPSINK 154.67 0.0014437 0 6581.7 8671.7 7472.1 8485.2 9176.2 6798 9509.8 7760 7193.8 6489.9 TRUE FALSE 7085.600012 8241.075988 7721.216085 7791.932017 8815.896281 7056.702654 8261.151837 8774.258644 7819.503721 6278.135094 1.12861541 1.312663054 1.229858225 1.241122069 1.404222137 1.124012553 1.315860795 1.397589971 1.245513772 1 12.61612036 -8.568638349 20.81678121 0.999999997 1.272896093 0.439553364 0.090591137 2933.218102 1334366.796 0.08491776 0.021925671 2.70E-09 8.568638349 0.272896095 S(ph)PMDSLLHPR ddPTM_A459_MK2206_30min_R1 1 SPMDSLLHPR 10 0 E9PAK5;O75064 E9PAK5 DENND4B DENN domain-containing protein 4B 1 S(1)PMDSLLHPR 127.52 0.0021652 2736800 643.2 531.19 409.67 462.92 656.64 447.13 638.51 526.39 467.6 428.03 TRUE FALSE 588.4924624 496.6094345 381.8627418 498.5741786 630.4846383 472.4461142 595.9161629 521.7878277 516.2086933 481.0575879 1.223330589 1.032328451 0.793798396 1.036412669 1.310621959 0.982098872 1.23876263 1.084668116 1.073070473 1 8.910065801 -6.01563635 24.96804246 1.123646837 1.000909324 0.099723314 0.134523729 1341.039804 2141367.428 0.039127917 0.052163868 9.65E-07 6.01563635 -0.122737513 S(ph)PMHVRNVGNPS(ph)DLPRT(ph)FEFMK ddPTM_A459_MK2206_30min_R2 1 SPMHVRNVGNPSDLPRTFEFMK 22 2 Q8IYI8 Q8IYI8 ZNF440 Zinc finger protein 440 3 S(1)PMHVRNVGNPS(1)DLPRT(1)FEFMK 51.166 0.038961 11408000 15032 35089 25113 69456 45489 146600 22846 18771 81043 12937 TRUE FALSE 16182.86148 33346.53128 25950.25489 63781.22262 43702.8733 152178.9657 19846.29276 21224.43415 88091.97365 12514.86675 1.293090993 2.664553443 2.07355423 5.096436414 3.492076597 12.15985506 1.585817345 1.695937686 7.038986144 1 13.61135531 -5.756904311 24.28494332 4.75587568 2.075813848 0.124265001 3.10198393 168.6035109 902836.682 0.857376338 1.422056658 1.75E-06 5.756904311 -2.680061833 S(ph)PMLER ddPTM_A459_MK2206_30min_R2 1 SPMLER 6 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 S(1)PMLER 93.143 0.042318 5672100 13588 10508 9560.8 13227 8322 7408.8 10018 9808.5 7063.9 12960 TRUE FALSE 14628.30773 9986.188 9879.5523 12146.31179 7995.236465 7690.747076 8702.624566 11090.50463 7678.305253 12537.11626 1.166800038 0.796529903 0.788024303 0.968828201 0.637725319 0.613438283 0.694148829 0.884613686 0.612445884 1 13.61391792 -2.258234103 1.188284189 0.75564462 199.9963712 0.420742539 0.135130848 707.3959243 2.73148837 0.039660156 382158.1711 0.005517799 2.258234103 199.2407266 S(ph)PMQEEEDLAAGVGR ddPTM_A459_MK2206_30min_R2 1 SPMQEEEDLAAGVGR 15 0 Q92560;F8W6N3 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 S(1)PMQEEEDLAAGVGR 99.915 0.0079272 4659100 1677.4 1784.2 3936.9 1146.3 1119.4 2657.2 3533.7 1440.1 832.25 2903.3 TRUE FALSE 1805.823034 1695.599222 4068.154281 1052.643623 1075.446731 2758.321608 3069.720945 1628.326015 904.6376006 2808.565559 0.642969871 0.603724281 1.448481154 0.374797597 0.382916727 0.982110458 1.092985327 0.57977141 0.322099514 1 11.45561776 S(ph)PMY(ph)FFLT(ph)FLSLLDVMFS(ph)SVVAPK ddPTM_A459_MK2206_30min_R1 1 SPMYFFLTFLSLLDVMFSSVVAPK 24 0 Q8NH72 Q8NH72 OR4C6 Olfactory receptor 4C6 4 S(0.998)PMY(0.994)FFLT(0.885)FLS(0.261)LLDVMFS(0.733)S(0.129)VVAPK 61.767 0.011358 0 554.47 352.68 535.17 357.51 387.46 323.95 356.83 592.38 413.03 469.04 TRUE FALSE 507.3094149 329.7204679 498.8441515 385.0454821 372.0266477 342.291769 333.0265218 587.2008841 455.9659465 527.1482163 0.9623658 0.625479624 0.946307198 0.730431158 0.705734433 0.649327378 0.631751207 1.113919892 0.864967257 1 9.042064846 -7.760449341 24.99991795 0.992082683 0.746595006 0.441000696 0.125202765 23.84015308 602054.0075 0.061247282 0.032751014 1.74E-08 7.760449341 -0.245487677 S(ph)PNELVDDLFK ddPTM_A459_MK2206_30min_R1 3 SPNELVDDLFK 11 0 Q9UNZ2-4;Q9UNZ2;Q9UNZ2-5;F2Z2K0 Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 1 S(1)PNELVDDLFK;S(1)PNELVDDLFK;S(1)PNELVDDLFK 141.06 0.0010349 65862600 6002.8 5901.3 6575.6 5558.5 5720.4 4765.6 5842.4 5948 5619.4 5317.8 TRUE FALSE 5492.230338 5517.124297 6129.266593 5986.616633 5492.544355 5035.424154 5452.664156 5895.997263 6203.556739 5976.609211 0.918954234 0.923119465 1.025542473 1.001674431 0.919006775 0.842521901 0.912334062 0.986512093 1.037972623 1 12.5451115 -7.954407516 4.9135905 1.017549408 0.936474114 0.340752644 0.048109776 0.250796419 13.51432542 0.032655493 0.014587996 1.11E-08 7.954407516 -0.081075294 S(ph)PNELVDDLFK ddPTM_A459_MK2206_30min_R2 2 SPNELVDDLFK 11 0 Q9UNZ2-4;Q9UNZ2;Q9UNZ2-5;F2Z2K0 Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 1 S(1)PNELVDDLFK;S(1)PNELVDDLFK 129.38 0.0025965 8446200 21504.4 26265 25669 23120 25874 21430 24451 19870.9 22051 26110 TRUE FALSE 23150.7934 24960.71829 26524.79165 21231.02204 24858.05675 22245.53367 21240.55433 22468.09486 23968.95612 25258.03284 0.916571514 0.988228911 1.050152711 0.840565145 0.984164401 0.880731045 0.840942542 0.889542547 0.948963693 1 14.62445466 -5.761067779 24.99999971 0.906254532 0.98530882 0.236864767 0.059272101 13.16943054 885869.891 0.016178464 0.025932505 1.73E-06 5.761067779 0.079054289 S(ph)PNQSLR ddPTM_A459_MK2206_30min_R2 1 SPNQSLR 7 0 Q96B01-3;Q96B01-2;Q96B01 Q96B01-3 RAD51AP1 RAD51-associated protein 1 1 S(1)PNQSLR 95.775 0.023573 11229000 9718.3 13965 14714 11943 11779 17601 12007 12051 12589 14541 TRUE FALSE 10462.34052 13271.51841 15204.55742 10967.2187 11316.49728 18270.81839 10430.46648 13626.10708 13683.96846 14066.52836 0.743775596 0.943482149 1.080903335 0.779667763 0.804498238 1.298886116 0.741509647 0.968690122 0.972803531 1 13.77997869 S(ph)PNREWEVLQPAPHQVITNLPEGVR ddPTM_A459_MK2206_30min_R2 4 SPNREWEVLQPAPHQVITNLPEGVR 25 1 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(1)PNREWEVLQPAPHQVITNLPEGVR;S(1)PNREWEVLQPAPHQVITNLPEGVR;S(1)PNREWEVLQPAPHQVITNLPEGVR;S(1)PNREWEVLQPAPHQVITNLPEGVR 94.152 4.65E-06 24319600 27236.91 32158.7 29044.6 34563.1 28696.9 24931.71 29789.6 22987.91 27605.35 29669.4 TRUE FALSE 29322.18877 30561.74572 30012.93247 31739.18417 27570.11552 25880.50369 25878.18974 25992.50877 30006.41344 28701.28991 1.021633134 1.064821331 1.045699777 1.105845217 0.960588029 0.901719183 0.901638561 0.905621624 1.045472644 1 14.80882796 -6.380110756 5.751097813 0.940984282 1.05843643 0.543602734 0.047580299 0.167840098 7.275954089 0.01492534 0.016934518 4.17E-07 6.380110756 0.117452148 S(ph)PNSHDSEPWTLLR ddPTM_A459_MK2206_30min_R1 3 SPNSHDSEPWTLLR 14 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 S(0.979)PNS(0.021)HDSEPWTLLR;S(0.998)PNS(0.002)HDSEPWTLLR;S(0.999)PNS(0.001)HDSEPWTLLR 154.23 0.00023026 12070600 3729.51 3028.58 2442.99 2105.99 4208.5 5013.7 4629.7 3013.72 2376.61 2253.93 TRUE FALSE 3412.29559 2831.418892 2277.166645 2268.193715 4040.866533 5297.571361 4320.86116 2987.371364 2623.667114 2533.163865 1.347048897 1.117740124 0.898941706 0.895399522 1.595185606 2.091286488 1.705717194 1.179304429 1.035727357 1 11.30672469 -6.265966742 24.95569868 1.489898574 1.056719466 0.219410782 0.331813803 552.1314379 3043450.865 0.111273115 0.130396466 5.42E-07 6.265966742 -0.433179108 S(ph)PNSHDSEPWTLLR ddPTM_A459_MK2206_30min_R2 2 SPNSHDSEPWTLLR 14 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 S(1)PNSHDSEPWTLLR;S(1)PNSHDSEPWTLLR 177.21 4.64E-05 8420000 12995 21296.4 11686.6 28414 24914 27551 29168 21449 19778.1 18004.1 TRUE FALSE 13989.90719 20238.85174 12076.22541 26092.48531 23935.75118 28599.47261 25338.20656 24252.45795 21498.36339 17416.62769 0.803250057 1.162041935 0.693373346 1.49813648 1.374304578 1.642078657 1.454828513 1.39248874 1.234358555 1 14.08817769 -5.77049406 24.99999357 1.402178671 0.913803778 0.558485 0.195639525 128.2894681 354207.9161 0.052613718 0.07931358 1.70E-06 5.77049406 -0.488374893 S(ph)PPACSSSSSSLFSAVVAR ddPTM_A459_MK2206_30min_R2 1 SPPACSSSSSSLFSAVVAR 19 0 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 S(1)PPACSSSSSSLFSAVVAR 154.31 7.73E-06 8361600 1918.3 5282.3 3361 3632.1 4808.6 4173.8 5438 4449.7 5172.7 6051.8 TRUE FALSE 2065.166523 5019.988663 3473.054063 3335.345811 4619.790203 4332.636884 4723.984068 5031.291068 5622.612096 5854.330262 0.352758801 0.857482998 0.593245326 0.569722865 0.789123605 0.740073875 0.806921348 0.859413604 0.960419355 1 12.51528842 -7.030477126 0.349515316 1.030759356 0.51324404 0.609357301 0.116922236 1.171774542 0.329385368 0.138921782 0.221458684 9.32E-08 7.030477126 -0.517515316 S(ph)PPADAIPK ddPTM_A459_MK2206_30min_R1 3 SPPADAIPK 9 0 P18754-2;M0R1Q8;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4;C9JW69;P18754 P18754-2 RCC1 Regulator of chromosome condensation 1 S(1)PPADAIPK;S(1)PPADAIPK;S(1)PPADAIPK 96.171 0.021721 142853000 17018.8 18165.4 16906 14972.2 17641.7 12961.9 17277.8 16262.6 14661 14445.8 TRUE FALSE 15571.26169 16982.82916 15758.46782 16125.36144 16938.99373 13695.79158 16125.22949 16120.4178 16185.06341 16235.45476 0.959089962 1.046033475 0.97062066 0.993218956 1.043333493 0.843573018 0.993210829 0.99291446 0.996896216 1 13.98686018 -3.71496745 14.34826329 0.983322422 0.98920127 0 0.053443958 0 0 0.012087026 0 0.000192767 3.71496745 0.005878848 S(ph)PPADAIPK ddPTM_A459_MK2206_30min_R2 4 SPPADAIPK 9 0 P18754-2;M0R1Q8;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4;C9JW69;P18754 P18754-2 RCC1 Regulator of chromosome condensation 1 S(1)PPADAIPK;S(1)PPADAIPK;S(1)PPADAIPK;S(1)PPADAIPK 96.171 0.021721 203346000 294023 296749 303867 296810 291649 275915 307086 231576 286633 308309 TRUE FALSE 316533.6269 282012.8762 313997.7741 272559.6736 280197.3948 286415.1387 266765.2393 261843.7783 311563.8202 298248.9026 1.061306929 0.945562159 1.052804458 0.913866476 0.939475024 0.960322523 0.894438293 0.877937106 1.044643643 1 18.1861573 -5.768273875 24.99688181 0.940175921 1.012458282 0.260225421 0.054813954 202.4909203 740604.5404 0.014787427 0.022486065 1.71E-06 5.768273875 0.072282361 S(ph)PPAPGLQPMR ddPTM_A459_MK2206_30min_R1 2 SPPAPGLQPMR 11 0 P15408;P15408-3;P15408-2;C9JCN8 P15408 FOSL2 Fos-related antigen 2 1 S(1)PPAPGLQPMR;S(1)PPAPGLQPMR 101.71 0.015002 105491000 449.96 621.24 511.47 500.7 379.04 505.08 496.98 533.81 554.14 214.98 TRUE FALSE 411.6885392 580.7971631 476.7528414 539.2640008 363.9420342 533.6771931 463.827371 529.1429554 611.744836 241.6133454 1.703914734 2.403828986 1.973205746 2.231929697 1.506299387 2.20880677 1.919709237 2.190040267 2.531916583 1 7.916556333 S(ph)PPAPGLQPMR ddPTM_A459_MK2206_30min_R2 5 SPPAPGLQPMR 11 0 P15408;P15408-3;P15408-2;C9JCN8 P15408 FOSL2 Fos-related antigen 2 1 S(1)PPAPGLQPMR;S(1)PPAPGLQPMR;S(1)PPAPGLQPMR;S(1)PPAPGLQPMR;S(1)PPAPGLQPMR 118.9 0.0051741 275191900 4477.1 20083.9 9212.7 30137.5 20283.4 21947.2 18615.3 8173.6 14763.1 14543.7 TRUE FALSE 4819.870218 19086.56273 9519.84682 27675.16984 19486.9718 22782.41608 16171.08875 9241.917584 16047.16775 14069.14026 0.342584559 1.356626089 0.676647375 1.967083228 1.385086184 1.619318285 1.149401346 0.656892846 1.140593345 1 13.78024655 -7.536449428 23.89408429 0.919875033 1.258174994 0.077135946 0.442668144 338.0700078 595231.5898 0.208610174 0.120538331 2.91E-08 7.536449428 0.338299962 S(ph)PPAS(ph)PESWK ddPTM_A459_MK2206_30min_R2 1 SPPASPESWK 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 S(1)PPAS(1)PESWK 136.93 0.032785 5540900 32524 24105 27040 24509 24666 19768 30217 25623 18541 30292 TRUE FALSE 35014.06245 22907.98075 27941.5001 22506.5363 23697.4889 20520.28509 26249.4716 28972.01408 20153.66267 29303.57452 1.194873425 0.781746975 0.953518489 0.768047471 0.808689359 0.700265597 0.89577712 0.988685324 0.687754412 1 14.83878904 -4.75572414 24.99064215 0.839638667 1.194873996 0.490210861 0.107693603 153.888161 672827.2724 0.025759897 0.222920296 1.75E-05 4.75572414 0.355235329 S(ph)PPEEPPDFCCPK ddPTM_A459_MK2206_30min_R1 2 SPPEEPPDFCCPK 13 0 A0A087X0G7;A0A087WUW6;A0A087X1B1;Q9Y6K9-3;Q9Y6K9;Q9Y6K9-2 A0A087X0G7 IKBKG NF-kappa-B essential modulator 1 S(1)PPEEPPDFCCPK;S(1)PPEEPPDFCCPK 177.81 0.00010502 16376000 2829.5 2908.7 2665.88 2623.62 2659.1 2006.47 2169.18 2401.47 2329.32 2279.02 TRUE FALSE 2588.836167 2719.343101 2484.927493 2825.691667 2553.182416 2120.074597 2024.47796 2380.474201 2571.46115 2561.362203 1.010726309 1.061678469 0.97015857 1.103198784 0.99680647 0.827713704 0.790391128 0.929378203 1.003942803 1 11.32269556 -6.584184949 6.94627767 0.898999476 1.035549516 0.419375431 0.070139044 0.203203274 18.56820247 0.024040464 0.024069395 2.61E-07 6.584184949 0.13655004 S(ph)PPEEPPDFCCPK ddPTM_A459_MK2206_30min_R2 3 SPPEEPPDFCCPK 13 0 A0A087X0G7;A0A087WUW6;A0A087X1B1;Q9Y6K9-3;Q9Y6K9;Q9Y6K9-2 A0A087X0G7 IKBKG NF-kappa-B essential modulator 1 S(1)PPEEPPDFCCPK;S(1)PPEEPPDFCCPK;S(1)PPEEPPDFCCPK 113.69 0.0051009 21083600 37675.9 43963.5 50665.2 50498 45871.8 38620.7 53652.1 47471.5 38534.4 52306.3 TRUE FALSE 40560.39587 41780.33652 52354.35248 46372.15186 44070.64264 40090.4378 46607.51482 53676.18804 41886.05246 50599.54971 0.801595985 0.825705698 1.034680205 0.916453844 0.870969068 0.792308193 0.921105328 1.06080367 0.827794964 1 15.62683693 -1.522986208 0.020236666 1.613093729 4.63E-05 0.149331334 0.086178792 6481.135439 10.14444997 298.932617 543.222689 0.029992578 1.522986208 -1.613047404 S(ph)PPEGDTTLFLSR ddPTM_A459_MK2206_30min_R1 2 SPPEGDTTLFLSR 13 0 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(1)PPEGDTTLFLSR;S(1)PPEGDTTLFLSR 170.26 0.00023238 68599000 183.33 300.98 278.84 198.951 185.89 253.25 396.36 79.041 201.797 319.07 TRUE FALSE 167.7368208 281.3861473 259.9131177 214.2742405 178.4856077 267.5887961 369.9195476 78.34995287 222.7745203 358.5988005 0.467756224 0.784682344 0.724801972 0.59753195 0.497730632 0.746206613 1.031569395 0.218489166 0.6212361 1 8.486226852 -5.760288667 24.196264 0.651345329 0.67164033 0 0.233894603 422.7835942 8889314.627 0.064893887 0.104734689 1.74E-06 5.760288667 0.020295001 S(ph)PPEGDTTLFLSR ddPTM_A459_MK2206_30min_R2 4 SPPEGDTTLFLSR 13 0 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(1)PPEGDTTLFLSR;S(1)PPEGDTTLFLSR;S(1)PPEGDTTLFLSR;S(1)PPEGDTTLFLSR 160.46 0.00036396 81169000 7457.2 7467.4 10423 8871.8 11827.3 6983.2 10420 10571.49 5915.1 7303.2 TRUE FALSE 8028.128966 7096.579775 10770.49762 8146.945561 11362.90077 7248.950569 9051.841483 11953.22004 6429.584706 7064.897182 1.136340524 1.004484509 1.524508756 1.153158404 1.608360388 1.026051814 1.281241786 1.691917056 0.910074774 1 12.78645285 -5.230849064 24.8985239 1.298095343 1.070412467 0.087695351 0.254172239 1381.699953 1124609.286 0.060244616 0.15934951 5.88E-06 5.230849064 -0.227682876 S(ph)PPEHYVQETPLMFSR ddPTM_A459_MK2206_30min_R1 2 SPPEHYVQETPLMFSR 16 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.984)PPEHY(0.016)VQETPLMFSR;S(0.996)PPEHY(0.004)VQETPLMFSR 120.08 0.00108 8734800 3884.2 4391.6 4086.8 3318.6 3682.2 3262.7 4536.9 3673.1 3517.8 4444.1 TRUE FALSE 3553.828393 4105.706042 3809.399402 3574.199147 3535.530177 3447.431254 4234.251679 3640.986474 3883.487899 4994.668659 0.711524354 0.8220177 0.762693116 0.715602854 0.707860805 0.690222213 0.847754269 0.728974577 0.777526632 1 12.28617326 -9.994304566 0.632731716 1.027325792 0.746132582 0.708789287 0.048157205 6.381385433 2.036042578 0.454113479 0.01924219 1.01E-10 9.994304566 -0.28119321 S(ph)PPEHYVQETPLMFSR ddPTM_A459_MK2206_30min_R2 1 SPPEHYVQETPLMFSR 16 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(1)PPEHYVQETPLMFSR 115.1 0.0013407 4500800 10693 13241 10062 11201 11265 8312.1 12047 8992.3 7742.5 11716 TRUE FALSE 11511.6643 12583.47119 10397.46206 10285.84247 10822.6795 8628.42279 10465.21443 10167.62449 8415.928655 11333.70788 1.015701518 1.110269589 0.917392805 0.907544343 0.954910751 0.761306263 0.923370757 0.897113689 0.7425574 1 13.4683323 -5.390815636 4.228944248 0.880931895 1.06201166 0.449220299 0.077927281 0.188022406 5.490034836 0.020128401 0.044492617 4.07E-06 5.390815636 0.181079766 S(ph)PPETAAPVEDMAR ddPTM_A459_MK2206_30min_R1 1 SPPETAAPVEDMAR 14 0 A0A2R8Y5V0;Q9Y3L3;A0A3B3IU28;Q6ZT62-2;Q6ZT62 A0A2R8Y5V0 SH3BP1 SH3 domain-binding protein 1 1 S(0.999)PPET(0.001)AAPVEDMAR 130.66 0.00095328 6083700 75.32 142.27 143.58 66.584 0 167.8 66.636 145.82 163.81 123.11 TRUE FALSE 68.91363848 133.0081971 133.8341896 71.71231122 0 177.300691 62.19083402 144.5451111 180.8386357 138.3617962 0.4980684 0.961307245 0.967277047 0.518295607 0 1.281428081 0.449479811 1.044689467 1.306998323 1 7.112301838 -7.917934724 6.342431864 1.160858703 0.684091271 0.272239767 0.338666893 0.275248762 16.78044128 0.189730482 0.08963286 1.21E-08 7.917934724 -0.476767432 S(ph)PPETAAPVEDMAR ddPTM_A459_MK2206_30min_R2 1 SPPETAAPVEDMAR 14 0 A0A2R8Y5V0;Q9Y3L3;A0A3B3IU28;Q6ZT62-2;Q6ZT62 A0A2R8Y5V0 SH3BP1 SH3 domain-binding protein 1 1 S(0.996)PPET(0.004)AAPVEDMAR 114.21 0.0041375 0 1149.8 1525.3 715.48 2893.3 1514.9 1427.9 2853.4 522.66 2915.3 2792.6 TRUE FALSE 1237.829572 1449.55582 739.3337461 2656.908135 1455.417414 1482.239735 2478.745152 590.9734566 3168.867524 2701.477691 0.458204625 0.53657886 0.273677532 0.983501786 0.538748633 0.548677392 0.917551591 0.218759333 1.173012657 1 11.39953305 -9.033872747 0.085903092 1.62369572 1.31E-09 0.253770233 0.269945708 46.36896813 1.741220954 19.12893063 12.5997269 9.25E-10 9.033872747 -1.623695719 S(ph)PPGAAASAAAKPPPLSAK ddPTM_A459_MK2206_30min_R1 3 SPPGAAASAAAKPPPLSAK 19 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 S(0.998)PPGAAAS(0.002)AAAKPPPLSAK;S(0.998)PPGAAAS(0.002)AAAKPPPLSAK;S(0.994)PPGAAAS(0.006)AAAKPPPLSAK 93.215 0.0030834 112854700 10822.3 10281.02 10279.55 8356.07 9120.02 9371.36 10117.69 9366.92 10022 9540.79 TRUE FALSE 9901.806555 9611.723729 9581.802786 8999.655959 8756.750291 9901.958305 9442.757361 9285.026006 11063.82276 10722.77509 0.923436934 0.896383972 0.893593562 0.839302874 0.816649628 0.923451086 0.880626263 0.865916325 1.031805915 1 13.38839071 -8.260707957 24.99991459 1.015902972 0.878936308 0.735998016 0.032572616 32.95591645 1126534.325 0.026725032 0.00872079 5.49E-09 8.260707957 -0.136966663 S(ph)PPGAAASAAAKPPPLSAK ddPTM_A459_MK2206_30min_R2 2 SPPGAAASAAAKPPPLSAK 19 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 S(0.998)PPGAAAS(0.002)AAAKPPPLSAK;S(0.86)PPGAAAS(0.139)AAAKPPPLSAK 99.413 0.00075076 142076000 284355 297480 282978 304290 250081 228869 318810 262795 226293 311290 TRUE FALSE 306125.4374 282707.5758 292412.3453 279428.5336 240261.5634 237578.7702 276949.864 297143.2088 245975.5561 301132.6328 1.016580085 0.938814147 0.971041705 0.927925117 0.797859605 0.788950596 0.919693962 0.986751937 0.816834608 1 18.20003953 -6.004754136 7.330986277 0.879592783 0.968522311 0.245923493 0.070448034 0.192222428 70.39930361 0.021007052 0.029441888 9.89E-07 6.004754136 0.088929528 S(ph)PPGAEEPQAPPASR ddPTM_A459_MK2206_30min_R2 1 SPPGAEEPQAPPASR 15 0 K7EQI9;Q86VR2-2;Q86VR2 K7EQI9 FAM134C Protein FAM134C 1 S(1)PPGAEEPQAPPASR 94.339 0.020097 0 1304.6 2182.3 2918.6 2603.2 3066.6 3074.4 2417.6 2327.2 2164.7 1042.6 TRUE FALSE 1404.481179 2073.930155 3015.904667 2390.510233 2946.189876 3191.398446 2100.166216 2631.37303 2352.981693 1008.580047 1.392533178 2.056287114 2.990248196 2.370174027 2.921126472 3.16424904 2.082299983 2.608987792 2.332964745 1 9.978109875 -4.917709818 3.582611898 2.52167214 1.396652237 0.218639027 0.581679532 0.314719475 7.333960205 0.138196342 0.770866573 1.21E-05 4.917709818 -1.125019903 S(ph)PPGSGASTPVGPWDQAVQR ddPTM_A459_MK2206_30min_R1 2 SPPGSGASTPVGPWDQAVQR 20 0 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-2 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 S(1)PPGSGASTPVGPWDQAVQR;S(1)PPGSGASTPVGPWDQAVQR 279.12 7.53E-72 52292000 279.47 400.76 231.61 356.15 513.79 377.696 459.46 279.252 315.97 424.36 TRUE FALSE 255.6996089 374.6704512 215.8889585 383.5807347 493.3246563 399.0808211 428.8102617 276.8105292 348.8162122 476.9329206 0.536133276 0.785583119 0.452661054 0.804265586 1.034369059 0.836765096 0.899099733 0.580397195 0.731373737 1 8.897642559 -5.905899832 8.628088109 0.836273747 0.611715114 0.385375905 0.144136378 0.316330538 25.93765474 0.041915273 0.062323773 1.24E-06 5.905899832 -0.224558633 S(ph)PPGSGASTPVGPWDQAVQR ddPTM_A459_MK2206_30min_R2 4 SPPGSGASTPVGPWDQAVQR 20 0 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-2 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 S(0.998)PPGS(0.002)GASTPVGPWDQAVQR;S(1)PPGSGASTPVGPWDQAVQR;S(0.996)PPGS(0.004)GASTPVGPWDQAVQR;S(0.488)PPGS(0.487)GAS(0.016)T(0.009)PVGPWDQAVQR 135.95 0.00010676 101654000 6337.59 9852.6 12464.6 12675.5 13003.5 8253 9548.59 9198 6241.2 13233 TRUE FALSE 6822.800763 9363.334211 12880.16354 11639.8711 12492.91725 8567.073698 8294.848663 10400.21018 6784.048294 12801.20829 0.532980997 0.731441439 1.006167797 0.909279096 0.975917036 0.669239458 0.647973884 0.812439728 0.529953746 1 13.64399237 -6.793400306 24.99238687 0.71495211 0.83968062 0.073299466 0.169840811 467.4892812 365557.9423 0.060791536 0.053617413 1.61E-07 6.793400306 0.124728511 S(ph)PPKVPIVIQDDSLPAGPPPQIR ddPTM_A459_MK2206_30min_R1 2 SPPKVPIVIQDDSLPAGPPPQIR 23 1 Q7Z422-4;Q7Z422-5;Q7Z422;Q7Z422-2;Q7Z422-3 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 1 S(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)PPKVPIVIQDDSLPAGPPPQIR 156.31 1.12E-09 46506000 2096.51 2855.4 2270.4 2289.9 1717.72 1545.87 2229.61 1468.46 2394.3 2897 TRUE FALSE 1918.190815 2669.512941 2116.291574 2466.268495 1649.299575 1633.395823 2080.876785 1455.621409 2643.196053 3255.902231 0.589142634 0.819899601 0.649986217 0.757476214 0.506556849 0.501672258 0.639109112 0.447071597 0.811816776 1 11.66884166 -8.521837284 7.338937641 0.999974351 0.620526917 0.566007089 0.108593069 0.076975194 41.26623174 0.109285421 0.028264355 3.01E-09 8.521837284 -0.379447434 S(ph)PPKVPIVIQDDSLPAGPPPQIR ddPTM_A459_MK2206_30min_R2 4 SPPKVPIVIQDDSLPAGPPPQIR 23 1 Q7Z422-4;Q7Z422-5;Q7Z422;Q7Z422-2;Q7Z422-3 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 1 S(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)PPKVPIVIQDDSLPAGPPPQIR 119.88 5.85E-06 55278400 76008.9 70753 66826.1 64151.7 68359.7 53145.6 76898.7 69670.5 50031.7 70608 TRUE FALSE 81828.19982 67239.5089 69054.04882 58910.3009 65675.5547 55168.09305 66801.80832 78776.67356 54383.36683 68304.06674 1.197998944 0.98441443 1.01098005 0.862471354 0.961517488 0.807683871 0.978006311 1.153323328 0.796195152 1 16.05968386 -4.267626178 1.431271913 0.943864952 1.79006674 0.362450953 0.099841749 5.108752582 3.464088671 0.028061349 8.908294495 5.40E-05 4.267626178 0.846201787 S(ph)PPLATGYR ddPTM_A459_MK2206_30min_R2 2 SPPLATGYR 9 0 Q86U06-3;Q86U06-5;Q86U06-2;Q86U06 Q86U06-3 RBM23 Probable RNA-binding protein 23 1 S(1)PPLATGYR;S(1)PPLATGYR 86.189 0.034176 15599600 9361.5 20488.1 11724.3 19193.7 11490.4 18715.2 21460 18097.7 10379.6 18438.8 TRUE FALSE 10078.22364 19470.69075 12115.18231 17625.51331 11039.22916 19427.42005 18642.27622 20463.13153 11282.39885 17837.14347 0.565013319 1.091581216 0.679210902 0.988135423 0.618889969 1.08915534 1.045137987 1.147220213 0.632522739 1 14.12259697 -6.78193252 24.99928051 0.995904177 0.810412133 0.188995563 0.197695721 421.2840788 513914.8284 0.065719317 0.058024126 1.65E-07 6.78193252 -0.185492044 S(ph)PPLGLISR ddPTM_A459_MK2206_30min_R1 1 SPPLGLISR 9 0 Q16584;Q16584-2;E9PID4 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 S(1)PPLGLISR 90.913 0.027914 5804400 447.69 473.26 384.78 408.57 424.23 531.31 380.88 284.19 392.65 466.02 TRUE FALSE 409.6116146 442.450688 358.6622057 440.0381322 407.3320208 561.3923131 355.4721902 281.7053568 433.4673726 523.7540759 0.782068596 0.844768009 0.684791245 0.840161733 0.777716183 1.071862423 0.678700571 0.537858071 0.827616228 1 9.032745756 -8.54634828 23.29487766 1.000000007 0.778664222 0.207244413 0.130737064 4442.236969 4409173.369 0.131589593 0.033976287 2.84E-09 8.54634828 -0.221335785 S(ph)PPLGLISRPR ddPTM_A459_MK2206_30min_R2 2 SPPLGLISRPR 11 1 Q16584;Q16584-2;E9PID4 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 S(1)PPLGLISRPR;S(1)PPLGLISRPR 92.611 0.013619 6692700 9870.6 15207.8 15099.8 16808 15199 15842.7 14311.6 8652.1 14115.8 12446.7 TRUE FALSE 10626.30073 14452.60277 15603.2198 15434.73263 14602.21089 16445.60505 12432.46973 9782.959177 15343.56677 12040.5652 0.882541687 1.200325942 1.295887655 1.281894361 1.212751283 1.365849923 1.032548682 0.812499996 1.274322801 1 13.5556155 -7.407310379 8.521141916 1.010964451 1.213735883 0.225231537 0.159153275 0.428547349 28.89067888 0.066337051 0.044595972 3.91E-08 7.407310379 0.202771432 S(ph)PPLIGSESAYESFLSADDK ddPTM_A459_MK2206_30min_R1 4 SPPLIGSESAYESFLSADDK 20 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.999)PPLIGS(0.001)ESAYESFLSADDK;S(1)PPLIGSESAYESFLSADDK;S(1)PPLIGSESAYESFLSADDK;S(1)PPLIGSESAYESFLSADDK 249.56 4.13E-38 66227900 12621.4 13684.5 12053.6 7212.78 7711.14 8999.11 12981.7 9428.8 17712.7 25271.4 TRUE FALSE 11547.88365 12793.63656 11235.43522 7768.309565 7403.988965 9508.631831 12115.71448 9346.364996 19553.99855 28402.21182 0.406583956 0.45044508 0.395583108 0.273510726 0.260683534 0.334784907 0.426576443 0.329071731 0.688467457 1 14.79371566 -8.50410747 2.56442272 0.998781693 0.357759212 0.9182033 0.061288224 0.074316573 1.136467779 0.065764483 0.017838363 3.13E-09 8.50410747 -0.641022481 down S(ph)PPLIGSESAYESFLSADDK ddPTM_A459_MK2206_30min_R2 4 SPPLIGSESAYESFLSADDK 20 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.987)PPLIGS(0.013)ESAYESFLSADDK;S(0.998)PPLIGS(0.002)ESAYESFLSADDK;S(0.972)PPLIGS(0.028)ESAYESFLSADDK;S(0.991)PPLIGS(0.009)ESAYESFLSADDK 142.26 3.42E-05 15838300 173275 110514.9 122393.8 116180 91884.9 79075.7 134931.7 114699 83745.5 165364 TRUE FALSE 186541.0672 105026.8908 126474.3482 106687.7224 88277.03714 82084.98117 117215.0057 129690.5531 91029.53221 159968.1862 1.166113536 0.656548613 0.79062188 0.666930875 0.551841208 0.513133162 0.732739481 0.810727159 0.569047724 1 17.28742549 -4.759332276 24.99814852 0.685648854 1.166114151 0.505902245 0.137897526 44.21309492 524405.1903 0.033387502 0.21333332 1.74E-05 4.759332276 0.480465297 S(ph)PPLIGSESAYESFLSADDKASGR ddPTM_A459_MK2206_30min_R1 2 SPPLIGSESAYESFLSADDKASGR 24 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.999)PPLIGS(0.001)ESAYESFLSADDKASGR;S(1)PPLIGSESAYESFLSADDKASGR 209.64 4.72E-32 112101000 5254.9 6007.2 5167.1 4326 5480.1 4423.6 4646.3 5135.4 4111.9 3527.1 TRUE FALSE 4807.94316 5616.130188 4816.371648 4659.18927 5261.816013 4674.060409 4336.353805 5090.501739 4539.34672 3964.063776 1.212882393 1.416760805 1.215008617 1.175356789 1.327379253 1.179108277 1.093916256 1.284162422 1.145124543 1 11.95276446 -14.52287875 0.083936668 0.223467144 1.448029973 0.478682121 0.080965547 205.0312168 1.205305019 28.84206626 2.390387399 3.00E-15 14.52287875 1.224562829 S(ph)PPLIGSESAYESFLSADDKASGR ddPTM_A459_MK2206_30min_R2 5 SPPLIGSESAYESFLSADDKASGR 24 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.981)PPLIGS(0.015)ES(0.002)AY(0.002)ESFLSADDKASGR;S(0.99)PPLIGS(0.005)ES(0.003)AY(0.003)ESFLSADDKASGR;S(1)PPLIGSESAYESFLSADDKASGR;S(0.997)PPLIGS(0.003)ESAYESFLSADDKASGR;S(0.998)PPLIGS(0.001)ES(0.001)AY(0.001)ESFLSADDKASGR 132.37 5.80E-08 93081600 48820.8 80786.1 65082.5 63829.2 78851.7 65749.8 73883.8 50378.5 71433.8 61077.4 TRUE FALSE 52558.55798 76774.37975 67252.31807 58614.15018 75755.58606 68251.95471 64182.76831 56963.14293 77646.9828 59084.44944 0.889549763 1.299400781 1.138240581 0.992040219 1.282157772 1.155159358 1.086288675 0.964097042 1.314169524 1 15.85049085 -10.92991172 6.168968733 0.999972328 1.125902811 0.067566583 0.138745098 4.98E-05 4.79E-06 0.126769662 0.030739407 1.18E-11 10.92991172 0.125930483 S(ph)PPLPAVIR ddPTM_A459_MK2206_30min_R1 6 SPPLPAVIR 9 0 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR 122.94 0.0057853 357984000 4810.54 7016.85 5816.38 5446.7 4400.55 4018.01 4659.42 4686.69 5885.95 6129.91 TRUE FALSE 4401.378312 6560.05179 5421.580331 5866.205778 4225.266775 4245.506254 4348.598593 4645.714763 6497.815566 6889.329529 0.63886889 0.952204676 0.78695326 0.851491535 0.613305948 0.616243749 0.631207808 0.674334816 0.943170963 1 12.75014787 -8.357159311 4.704501339 0.992589574 0.725095238 0.468079886 0.107390607 0.219963841 7.649738744 0.112187748 0.029496241 4.39E-09 8.357159311 -0.267494336 S(ph)PPLPAVIR ddPTM_A459_MK2206_30min_R2 4 SPPLPAVIR 9 0 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR 112.3 0.0097763 302122900 12069.9 18300.9 19757.3 22370.2 16397.4 16952.6 17142.1 14772.1 12934.7 13575.4 TRUE FALSE 12993.98082 17392.10392 20415.99852 20542.4831 15753.55569 17597.74307 14891.32168 16702.86419 14059.73683 13132.43581 0.989457022 1.324362378 1.554623896 1.56425536 1.199591295 1.340021252 1.133934473 1.271878609 1.070611502 1 13.68084691 -7.971650988 0.774217212 1.008143695 1.351489873 0.311358331 0.162610694 0.7934423 0.943736871 0.16126115 0.068788924 1.07E-08 7.971650988 0.343346179 S(ph)PPLSPVGTTPVK ddPTM_A459_MK2206_30min_R2 3 SPPLSPVGTTPVK 13 0 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 1 S(1)PPLSPVGTTPVK;S(0.626)PPLS(0.339)PVGT(0.031)T(0.004)PVK;S(1)PPLSPVGTTPVK 186.51 0.00013374 32646000 82617 73012 77924 99143 76389 76581 112049 87199 84552 115556 TRUE FALSE 88942.22104 69386.33025 80521.94727 91042.69976 73389.58404 79495.34362 97336.83171 98596.2087 91906.18012 111785.4172 0.795651376 0.620710035 0.720326043 0.814441651 0.656521985 0.711142344 0.870747135 0.882013157 0.822166097 1 16.77037247 -8.028023901 0.562603648 0.989802622 0.704423044 0.620718252 0.066982942 0.519938541 0.382640209 0.068671264 0.037098864 9.38E-09 8.028023901 -0.285379577 S(ph)PPPESVDTPTSTK ddPTM_A459_MK2206_30min_R1 1 SPPPESVDTPTSTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(1)PPPESVDTPTSTK 121.45 0.0019187 8257000 1343.8 1169.7 1344 712.37 834.72 1171 1128.4 1024.3 1397.7 1348.2 TRUE FALSE 1229.502753 1093.552317 1252.773025 767.2368608 801.4713349 1237.301008 1053.126495 1015.344653 1542.995917 1515.225194 0.811432359 0.721709434 0.826789991 0.506351705 0.528945359 0.816578956 0.695029689 0.670094885 1.018327785 1 10.56531651 -8.263091295 24.97373485 1.009163943 0.694206738 0.585159808 0.105072536 107.2590718 1621471.488 0.090122401 0.028009574 5.46E-09 8.263091295 -0.314957205 S(ph)PPPESVDTPTSTK ddPTM_A459_MK2206_30min_R2 3 SPPPESVDTPTSTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(1)PPPESVDTPTSTK;S(1)PPPESVDTPTSTK;S(1)PPPESVDTPTSTK 152.16 0.00038786 6894400 66968 47167 38863 64209 28448.9 43247 90004 68749 23792 47055 TRUE FALSE 72095.12157 44824.75537 40158.67302 58962.91931 27331.85324 44892.79489 78186.36669 77734.73035 25861.38515 45519.5992 1.583825931 0.984735282 0.882228177 1.295330371 0.60044143 0.986230012 1.717641808 1.707720009 0.568137365 1 15.47420023 S(ph)PPPETIK ddPTM_A459_MK2206_30min_R1 1 SPPPETIK 8 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 S(1)PPPETIK 93.667 0.023742 8397200 2902.1 3011.4 2819.9 2653 3653.4 3368.5 3112.7 3254.6 2251.4 2476.7 TRUE FALSE 2655.261155 2815.357313 2628.493045 2857.33452 3507.877342 3559.221559 2905.057462 3226.145375 2485.441087 2783.532294 0.953917855 1.011433321 0.944301257 1.026513874 1.260225128 1.278670834 1.043658616 1.159011297 0.892909018 1 11.44270111 -6.01182752 23.11102717 1.121432031 0.975933749 0.230861602 0.110073843 289.929794 566529.9111 0.03262212 0.044661479 9.73E-07 6.01182752 -0.145498282 S(ph)PPPFFYR ddPTM_A459_MK2206_30min_R2 2 SPPPFFYR 8 0 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 S(1)PPPFFYR;S(1)PPPFFYR 88.37 0.031165 10798100 0 1250.9 1021.6 1663.31 871.15 0 0 883.25 0 1229.2 TRUE FALSE 0 1188.782125 1055.659634 1527.412252 836.9442738 0 0 998.6938077 0 1189.091305 0 0.999739987 0.887786859 1.28452058 0.703851984 0 0 0.839879834 0 1 10.21564378 -6.560287435 11.83940911 0.33660829 0.836976136 0.172150737 0.443078724 1.207128095 378.6092595 0.143387648 0.14347908 2.75E-07 6.560287435 0.500367846 S(ph)PPPGMGLNQNR ddPTM_A459_MK2206_30min_R2 1 SPPPGMGLNQNR 12 0 P23246;P23246-2 P23246 SFPQ "Splicing factor, proline- and glutamine-rich" 1 S(1)PPPGMGLNQNR 92.051 0.022198 30702000 0 1583.7 2817.5 3395.6 2063.6 3959.3 2979.9 0 1767.6 2000.9 TRUE FALSE 0 1505.055761 2911.434044 3118.168618 1982.572695 4109.973936 2588.63555 0 1921.342653 1935.610797 0 0.777561152 1.504142283 1.610948143 1.024262056 2.123347288 1.337373998 0 0.992628609 1 10.91857318 -7.71793106 24.99971128 0.622231811 1.237429864 0.143293051 0.588278766 232.845742 133792.0067 0.288815307 0.166746259 1.91E-08 7.71793106 0.615198053 S(ph)PPPPTHSTQLGAPSR ddPTM_A459_MK2206_30min_R2 1 SPPPPTHSTQLGAPSR 16 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 S(1)PPPPTHSTQLGAPSR 97.2 0.0077499 3643800 0 476.04 484.49 569 0 0 435.85 0 586.76 486.72 TRUE FALSE 0 452.4005458 500.6426548 522.5108799 0 0 378.6223715 0 637.7953242 470.8383663 0 0.960840446 1.063300467 1.109745758 0 0 0.804145113 0 1.354595058 1 8.879088073 -10.55392653 11.66972744 0.999954404 0.582821009 0.05431353 0.515242637 0 0 0.50127935 0.121578101 2.79E-11 10.55392653 -0.417133395 S(ph)PPPTVDESADNAFHLGPLR ddPTM_A459_MK2206_30min_R1 2 SPPPTVDESADNAFHLGPLR 20 0 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 S(1)PPPTVDESADNAFHLGPLR;S(0.998)PPPT(0.002)VDESADNAFHLGPLR 238.05 3.82E-30 9117200 996.22 1300.38 1188.24 985.38 1320.7 1411.07 1235.12 1184.52 1348.72 961.58 TRUE FALSE 911.4862576 1215.725026 1107.585579 1061.274138 1268.093722 1490.963564 1152.727398 1174.163867 1488.92427 1080.70779 0.843416015 1.124934082 1.024870543 0.982017663 1.173391859 1.379617671 1.066641149 1.086476731 1.377730673 1 10.07776077 -6.289054312 7.423588892 1.189617384 1.005338777 0.321316246 0.132242013 0.273129522 60.39897511 0.040079947 0.046309528 5.14E-07 6.289054312 -0.184278607 S(ph)PPPTVDESADNAFHLGPLR ddPTM_A459_MK2206_30min_R2 2 SPPPTVDESADNAFHLGPLR 20 0 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 S(0.995)PPPT(0.005)VDESADNAFHLGPLR;S(0.997)PPPT(0.003)VDESADNAFHLGPLR 170.5 1.23E-09 6974700 11275.3 9740.5 10235.6 16135 14019.5 21669 13301.7 12602.1 14239.5 17185.6 TRUE FALSE 12138.54564 9256.800934 10576.8498 14816.71889 13469.02399 22493.62898 11555.17081 14249.23774 15478.02597 16624.83528 0.730145318 0.556805573 0.636207795 0.891240042 0.810174884 1.353013645 0.695054755 0.857105499 0.931018305 1 14.02105243 -5.81621073 3.211862705 0.936826507 0.627313294 0.397800092 0.16558672 0.250519867 5.24165941 0.048486328 0.080386119 1.53E-06 5.81621073 -0.309513214 S(ph)PPREGSQGELTPANSQSR ddPTM_A459_MK2206_30min_R1 1 SPPREGSQGELTPANSQSR 19 1 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 S(0.99)PPREGS(0.005)QGELT(0.004)PANS(0.001)QSR 122.1 0.0020094 4337700 588.35 333.35 404.53 425.11 539.13 427.75 384.11 479.16 327.12 345.82 TRUE FALSE 538.307743 311.6488544 377.0716307 457.8520459 517.6553105 451.9688353 358.4867227 474.9707546 361.1252946 388.6627924 1.385025152 0.801848956 0.970176817 1.178018722 1.331888003 1.162881665 0.922359253 1.222063866 0.929148099 1 8.602375192 -8.282609999 24.24061631 0.964574005 1.109665365 0.114357963 0.172378967 1568.691858 1796146.401 0.16719533 0.043377605 5.22E-09 8.282609999 0.14509136 S(ph)PPSLALR ddPTM_A459_MK2206_30min_R2 2 SPPSLALR 8 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 S(0.998)PPS(0.002)LALR;S(1)PPSLALR 109.44 0.0097175 0 7817.4 13259.3 15431.6 14703.4 20095.2 17197.2 11949.6 15522.4 13708.1 7514.3 TRUE FALSE 8415.906155 12600.86244 15946.08184 13502.08519 19306.16148 17851.6515 10380.60317 17551.23098 14900.40576 7269.109006 1.157763097 1.733481013 2.193677633 1.857460821 2.655918554 2.455823882 1.428043404 2.414495499 2.049825604 1 12.82756282 -4.849206469 2.490959844 2.070521306 1.028187941 0.220224442 0.47279531 0.595039859 5.292692343 0.11811829 1.261442298 1.42E-05 4.849206469 -1.042333365 S(ph)PPSLHLLEAFK ddPTM_A459_MK2206_30min_R1 2 SPPSLHLLEAFK 12 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 S(0.994)PPS(0.006)LHLLEAFK;S(0.998)PPS(0.002)LHLLEAFK 103.88 0.006806 12096600 7244.7 3770.5 4843.7 3355.6 6768.2 7364.2 7636.1 5121.2 4587.7 4867.4 TRUE FALSE 6628.500222 3525.039765 4514.923139 3614.048893 6498.608262 7781.15464 7126.709702 5076.425888 5064.607832 5470.410259 1.211700751 0.644383071 0.825335382 0.660654087 1.187956287 1.422407876 1.302774265 0.927979009 0.925818648 1 12.41743332 -6.275055236 24.6416413 1.147698489 0.821138451 0.319467209 0.20736703 752.1876726 1361287.503 0.067458404 0.076914 5.31E-07 6.275055236 -0.326560038 S(ph)PPSLHLLEAFK ddPTM_A459_MK2206_30min_R2 2 SPPSLHLLEAFK 12 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 S(0.993)PPS(0.007)LHLLEAFK;S(0.968)PPS(0.032)LHLLEAFK 104.55 0.0064139 10080400 31214 53237 47753 75524 69175 74655 77838 47779 57283 56662 TRUE FALSE 33603.76784 50593.32799 49345.06119 69353.44761 66458.84192 77496.04834 67617.7771 54023.87935 62265.3718 54813.12358 0.613060626 0.923014867 0.90024173 1.265270853 1.212462228 1.413822882 1.233605616 0.985601181 1.135957372 1 15.74223373 -5.134247179 1.284658547 1.187974618 0.583241246 0.620954067 0.134740818 0.542452667 1.194374924 0.043994777 0.366376977 7.34E-06 5.134247179 -0.604733371 S(ph)PPSPVER ddPTM_A459_MK2206_30min_R2 1 SPPSPVER 8 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 S(1)PPSPVER 83.998 0.037547 3162100 6698.4 9024.6 8893.8 12254 12548 8053.9 11047 7679.8 10676 7340.1 TRUE FALSE 7211.234654 8576.451487 9190.314853 11252.809 12055.30247 8360.396808 9596.51563 8683.576229 11604.57918 7100.593138 1.01558201 1.207850009 1.294302416 1.584770284 1.697788091 1.177422315 1.351509014 1.222936741 1.634311241 1 12.79372383 -5.030055569 2.01709346 1.392844368 1.002266383 0.22596321 0.206451999 0.653439253 4.1711687 0.056359872 0.392821112 9.33E-06 5.030055569 -0.390577985 S(ph)PPSSSEIFTPAHEENVR ddPTM_A459_MK2206_30min_R1 5 SPPSSSEIFTPAHEENVR 18 0 I3L2L5;I3L3A7;I3L317;I3L4Q0;C9JLW8 I3L2L5 FAM195B Protein FAM195B 1 S(0.997)PPS(0.002)SSEIFTPAHEENVR;S(1)PPSSSEIFTPAHEENVR;S(1)PPSSSEIFTPAHEENVR;S(1)PPSSSEIFTPAHEENVR;S(0.998)PPS(0.002)SSEIFTPAHEENVR 233.59 2.21E-19 257223000 7602.72 6497.55 7116.67 5526.774 6857.19 6477.452 7767.86 6168.61 7246.48 6564.07 TRUE FALSE 6956.068741 6074.558314 6633.610269 5952.447091 6584.053602 6844.199735 7249.680233 6114.678493 7999.777528 7377.276548 0.942904701 0.823414749 0.899195011 0.806862404 0.892477537 0.927740704 0.982704144 0.828853094 1.084380865 1 12.8488726 -7.785335544 0.705919238 1.016556147 0.868407616 0.371440337 0.066118888 0.73513118 0.718766858 0.059040935 0.028769341 1.64E-08 7.785335544 -0.148148531 S(ph)PPSSSEIFTPAHEENVR ddPTM_A459_MK2206_30min_R2 6 SPPSSSEIFTPAHEENVR 18 0 I3L2L5;I3L3A7;I3L317;I3L4Q0;C9JLW8 I3L2L5 FAM195B Protein FAM195B 1 S(0.797)PPS(0.049)S(0.142)S(0.012)EIFTPAHEENVR;S(0.998)PPS(0.001)S(0.001)SEIFTPAHEENVR;S(0.748)PPS(0.173)S(0.056)S(0.023)EIFTPAHEENVR;S(0.958)PPS(0.011)S(0.031)SEIFTPAHEENVR;S(0.969)PPS(0.028)S(0.001)S(0.001)EIFTPAHEENVR;S(0.729)PPS(0.046)S(0.046)S(0.179)EIFTPAHEENVR 132.4 0.00032128 284098500 32000.08 42719.8 34698.9 44676.9 39280.5 46665 43606.7 33514.58 32087.3 37484.9 TRUE FALSE 34450.03073 40598.39685 35855.74401 41026.65436 37738.1502 48440.86927 37881.08791 37895.05068 34878.19535 36261.77078 0.950037188 1.119592231 0.988802897 1.131402396 1.040714488 1.335866071 1.044656317 1.045041372 0.961844791 1 15.14616176 -7.917686602 2.650030082 0.985371077 1.094613533 0.152247605 0.099142988 0.53434938 7.300615106 0.071572754 0.02753476 1.21E-08 7.917686602 0.109242456 S(ph)PPSTGSTYGSSQK ddPTM_A459_MK2206_30min_R1 2 SPPSTGSTYGSSQK 14 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.556)PPS(0.135)T(0.304)GS(0.003)T(0.003)YGSSQK;S(0.942)PPS(0.047)T(0.009)GS(0.001)TYGSSQK 131.17 0.00091127 81827000 1923.68 1782.07 2024.18 1307.82 1402.32 1884.37 2401.7 1814.63 2482.95 3990.7 TRUE FALSE 1760.060914 1666.056919 1886.784301 1408.548523 1346.462625 1991.061401 2241.486975 1798.764881 2741.061538 4485.098044 0.392424178 0.371464994 0.420678496 0.314050776 0.300208069 0.443928178 0.499763205 0.401053637 0.611148633 1 12.13092381 -8.98334172 0.676871727 1.012709327 0.367615869 0.924976516 0.053263754 0.400237176 0.32027351 0.063655071 0.021392611 1.04E-09 8.98334172 -0.645093458 down S(ph)PPSTGSTYGSSQK ddPTM_A459_MK2206_30min_R2 5 SPPSTGSTYGSSQK 14 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.894)PPS(0.081)T(0.024)GS(0.001)TYGSSQK;S(0.985)PPS(0.003)T(0.011)GSTYGSSQK;S(0.992)PPS(0.003)T(0.006)GSTYGSSQK;S(0.995)PPS(0.004)T(0.001)GSTYGSSQK;S(0.998)PPS(0.001)T(0.001)GSTYGSSQK 133.05 0.00075803 434909900 74704.7 45621.4 56228.5 43867.9 35656.8 37531.7 54229.3 51092 31787.8 62032.2 TRUE FALSE 80424.14927 43355.90762 58103.13013 40283.75224 34256.73487 38959.99514 47108.92777 57769.89983 34552.64538 60008.09439 1.340221683 0.72250099 0.968254878 0.671305307 0.570868567 0.649245665 0.785042889 0.962701789 0.575799744 1 15.8728695 S(ph)PPSTGSTYGSSQKEESAASGGAAYTK ddPTM_A459_MK2206_30min_R1 2 SPPSTGSTYGSSQKEESAASGGAAYTK 27 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.919)PPS(0.05)T(0.029)GS(0.001)TYGSSQKEESAASGGAAYTK;S(0.979)PPS(0.016)T(0.004)GSTYGSSQKEESAASGGAAYTK 98.033 1.03E-06 79300000 2171.84 2516.68 2508.9 2054.03 2030.34 1897.53 2517.1 1851.2 2407.19 3045.9 TRUE FALSE 1987.113603 2352.843675 2338.602858 2212.231747 1949.467258 2004.966509 2349.188852 1835.015154 2657.426015 3423.249087 0.580475902 0.687313022 0.683152993 0.646237446 0.569478647 0.585691096 0.686245374 0.536044882 0.776287657 1 11.74115056 -8.560398794 4.511605303 0.999837503 0.626813073 0.839974236 0.051293129 0.078638761 5.589609217 0.049642482 0.012949669 2.75E-09 8.560398794 -0.373024429 S(ph)PPSTGSTYGSSQKEESAASGGAAYTK ddPTM_A459_MK2206_30min_R2 2 SPPSTGSTYGSSQKEESAASGGAAYTK 27 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.866)PPS(0.069)T(0.06)GS(0.002)T(0.002)Y(0.001)GSSQKEESAASGGAAYTK;S(0.446)PPS(0.222)T(0.222)GS(0.023)T(0.021)Y(0.02)GS(0.021)S(0.021)QKEES(0.002)AAS(0.001)GGAAYTK 65.278 0.03088 80250000 12673.1 20359.5 15042.8 17248 38381 23050 30771 20758 21480.2 24844 TRUE FALSE 13643.36228 19348.47684 15544.31944 15838.78323 36873.96909 23927.1839 26730.73074 23471.14187 23348.50897 24033.34231 0.567684765 0.805068083 0.646781427 0.65903373 1.534283855 0.995582869 1.11223526 0.97660748 0.971504864 1 14.55274968 -6.144683854 20.40624621 1.093260558 0.677622288 0.619073283 0.164674001 3.538297553 607.746589 0.047946224 0.061898515 7.17E-07 6.144683854 -0.41563827 S(ph)PPSYSVLYPSSDPK ddPTM_A459_MK2206_30min_R1 2 SPPSYSVLYPSSDPK 15 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 S(1)PPSYSVLYPSSDPK;S(0.993)PPS(0.007)YSVLYPSSDPK 204.67 5.67E-06 39384000 4966 4899.3 5381.6 4255.3 4317 3777.4 4192.5 4397.1 3695 3621.9 TRUE FALSE 4543.615622 4580.35468 5016.311986 4583.043943 4145.044749 3991.273124 3912.825975 4358.656618 4079.108473 4070.608316 1.116200644 1.12522609 1.2323249 1.125886744 1.018286317 0.980510237 0.961238633 1.070762962 1.002088178 1 11.99102869 -6.22612208 3.738234468 1.004330666 1.157534005 0.766931441 0.03928771 0.113808985 3.426073446 0.012676106 0.016107834 5.94E-07 6.22612208 0.153203339 S(ph)PPTQVAISSDSAR ddPTM_A459_MK2206_30min_R1 2 SPPTQVAISSDSAR 14 0 Q6ZUT6;H0YM82;Q6ZUT6-3;Q6ZUT6-4 Q6ZUT6 C15orf52 Uncharacterized protein C15orf52 1 S(0.997)PPT(0.003)QVAISSDSAR;S(1)PPTQVAISSDSAR 115.58 0.0037434 6994800 380.15 421.09 482.8 545.65 342.56 397.28 449.45 392.17 395.76 316.6 TRUE FALSE 347.8162463 393.6769645 450.0288812 587.6760575 328.9151098 419.7736503 419.4680106 388.741299 436.9006682 355.8227982 0.977498485 1.106384882 1.264755613 1.651597538 0.924378965 1.179726685 1.178867719 1.092513748 1.227860245 1 8.475015139 S(ph)PPVDCPR ddPTM_A459_MK2206_30min_R2 1 SPPVDCPR 8 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(1)PPVDCPR 104.01 0.014949 3824400 10768 8784.6 9696.7 12183 12647 16615 12598 8973.1 12033 10823 TRUE FALSE 11592.40636 8348.369538 10019.98314 11187.60993 12150.41523 17247.29547 10943.86747 10145.91498 13079.60859 10469.8464 1.107218379 0.797372686 0.957032487 1.068555307 1.160515138 1.647330325 1.045274883 0.969060538 1.249264611 1 13.35395266 -5.990415375 2.736810537 1.191888056 0.93848492 0.214552633 0.191872826 0.409094609 6.20881554 0.061285246 0.092492963 1.02E-06 5.990415375 -0.253403135 S(ph)PPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK ddPTM_A459_MK2206_30min_R1 2 SPPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK 37 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 S(0.954)PPVQPHT(0.013)PVT(0.011)IS(0.01)LGT(0.01)APS(0.003)LQNNQPVEFNHAINYVNK;S(0.92)PPVQPHT(0.057)PVT(0.011)IS(0.009)LGT(0.002)APSLQNNQPVEFNHAINYVNK 71.903 6.61E-06 96631000 4621.2 3824.6 4979.4 5282.3 6046.9 4934.3 4473 5947.3 3126.7 2716.82 TRUE FALSE 4228.142673 3575.617845 4641.412201 5689.143661 5806.039168 5213.675802 4174.614331 5895.303383 3451.731654 3053.400173 1.384732572 1.171028245 1.520079891 1.863215871 1.901499587 1.707498365 1.367201839 1.930733952 1.130455053 1 11.57620096 -8.427828684 6.176615169 1.002790219 1.601214395 0.453228318 0.239351469 0.209496184 10.3610931 0.250431265 0.06490296 3.73E-09 8.427828684 0.598424176 S(ph)PPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK ddPTM_A459_MK2206_30min_R2 2 SPPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK 37 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 S(0.961)PPVQPHT(0.033)PVT(0.004)IS(0.001)LGT(0.001)APS(0.001)LQNNQPVEFNHAINYVNK;S(0.89)PPVQPHT(0.101)PVT(0.008)IS(0.001)LGTAPSLQNNQPVEFNHAINYVNK 63.967 2.53E-05 69217000 74736 91802 94783 112831 97992 107725 110339 84865 100732 106677 TRUE FALSE 80457.84562 87243.24617 97943.01791 103612.3464 94144.34171 111824.5504 95851.35676 95957.14689 109493.4873 103196.1382 0.779659462 0.845411928 0.949095767 1.004033176 0.912285511 1.083611773 0.928826974 0.92985211 1.061023108 1 16.65502946 -5.147480888 1.851141161 0.984836735 0.770677019 0.6430847 0.052704156 0.279290027 1.57105102 0.014443936 0.080176029 7.12E-06 5.147480888 -0.214159716 S(ph)PQDLASTSR ddPTM_A459_MK2206_30min_R1 1 SPQDLASTSR 10 0 Q9HC52;C9JM54;C9J6K3 Q9HC52 CBX8 Chromobox protein homolog 8 1 S(1)PQDLASTSR 96.756 0.021358 3532900 659.8 695.63 685.83 577.86 583.82 592.22 981.29 502.96 616.76 680.56 TRUE FALSE 603.6805453 650.3443606 639.2777704 622.3668773 560.5652131 625.7509846 915.8299346 498.5626737 680.8744091 764.8729108 0.789256015 0.850264601 0.835796067 0.813686651 0.732886739 0.818111056 1.197362231 0.651824201 0.890179793 1 9.579076243 -7.036884536 24.94558386 0.920385413 0.805820584 0.19049755 0.12830493 1101.074764 744670.7289 0.048602709 0.037659802 9.19E-08 7.036884536 -0.114564829 S(ph)PQEGGSHVGR ddPTM_A459_MK2206_30min_R2 1 SPQEGGSHVGR 11 0 Q8TC76 Q8TC76 FAM110B Protein FAM110B 1 S(1)PQEGGSHVGR 87.216 0.037243 0 6706.2 5273.9 4285.8 4804.4 2990.8 3255.8 3074 3931.3 3546.9 3984.6 TRUE FALSE 7219.631828 5012.005795 4428.686433 4411.865151 2873.366164 3379.70175 2670.380107 4445.134408 3855.402951 3854.582828 1.872999531 1.300271915 1.148940529 1.144576559 0.745441541 0.876800915 0.692780575 1.153207651 1.000212766 1 11.91235901 -3.837066386 0.785156132 0.918352155 5.121425103 0.807120076 0.139279624 4.212822938 0.661009207 0.053951519 21.92596527 0.000145524 3.837066386 4.203072947 S(ph)PQFINLK ddPTM_A459_MK2206_30min_R2 2 SPQFINLK 8 0 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 S(1)PQFINLK;S(1)PQFINLK 125.72 0.005018 58805000 231140 246980 245180 256480 252672 200395 258640 201233 204988 257949 TRUE FALSE 248836.2561 234715.3323 253354.1788 235524.7636 242750.8277 208021.1721 224680.2573 227534.844 222817.4857 249532.1453 0.997211224 0.940621627 1.015316798 0.943865422 0.972823872 0.833644787 0.900406066 0.911845822 0.89294101 1 17.92886615 -6.693639062 24.84722208 0.901797789 0.972740487 0.364886807 0.043297582 49.44699295 18120.41121 0.013453345 0.01345334 2.02E-07 6.693639062 0.070942698 S(ph)PQISMSDIDLNLK ddPTM_A459_MK2206_30min_R1 2 SPQISMSDIDLNLK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(1)PQISMSDIDLNLK;S(1)PQISMSDIDLNLK 158.65 0.00030415 17183500 3228.3 3306.8 2860.2 2591.6 2719.8 2728.6 3098.6 2537.2 2870.2 4108.5 TRUE FALSE 2953.716133 3091.526719 2666.057593 2791.205481 2611.464607 2883.090974 2891.898048 2515.017528 3168.567561 4617.491998 0.639679751 0.669525084 0.577382179 0.60448518 0.565559097 0.624384617 0.626291946 0.544671768 0.686209649 1 12.17289375 -8.629631023 5.630694049 0.999995677 0.607731846 0.919426981 0.034873675 0.344366099 18.02237414 0.034217073 0.008877289 2.35E-09 8.629631023 -0.392263831 S(ph)PQISMSDIDLNLK ddPTM_A459_MK2206_30min_R2 1 SPQISMSDIDLNLK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(1)PQISMSDIDLNLK 143.02 0.00054136 1257900 5927.9 3802.1 3949.7 4920.8 4651.6 3484.3 3893 5949.6 2875.4 4172.5 TRUE FALSE 6381.744582 3613.293243 4081.381027 4518.754899 4468.954812 3616.897478 3381.844424 6727.233148 3125.497094 4036.351667 1.581067535 0.895187917 1.011155956 1.119514669 1.107176773 0.896080861 0.837846824 1.666661803 0.774337162 1 11.97883616 -4.751097847 24.95360525 1.048822589 1.581068663 0.322754187 0.236794651 525.125663 1267015.395 0.056923478 0.779976328 1.77E-05 4.751097847 0.532246073 S(ph)PQLATPGSSHPGEEECR ddPTM_A459_MK2206_30min_R2 2 SPQLATPGSSHPGEEECR 18 0 E7EWN3;Q9C0A6;Q9C0A6-2;Q9C0A6-3;H0Y3R4;H7C1F2 E7EWN3 SETD5 SET domain-containing protein 5 1 S(0.995)PQLAT(0.005)PGSSHPGEEECR;S(1)PQLATPGSSHPGEEECR 179.7 9.99E-10 13889700 20246 30951 22240.4 32865 32703 36548 35114 31039 29727 31975 TRUE FALSE 21796.04933 29414.01835 22981.88384 30179.82437 31418.9159 37938.85975 30503.48962 35095.90387 32312.60073 30931.65837 0.704651819 0.950935705 0.742989062 0.975693705 1.015752713 1.226538173 0.986157588 1.134627295 1.044644951 1 14.91679656 -6.030032795 2.467719581 1.079948401 0.814201977 0.628528369 0.091098592 0.178893014 2.174210247 0.026741103 0.03983499 9.33E-07 6.030032795 -0.265746424 S(ph)PQLSDFGLER ddPTM_A459_MK2206_30min_R1 5 SPQLSDFGLER 11 0 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER 188.63 1.95E-05 142608100 5093.19 4745.89 4834.5 4207.33 4595.85 3975.48 4556.75 4165.02 3987.06 3954.72 TRUE FALSE 4659.987445 4436.931698 4506.34761 4531.379286 4412.787563 4200.568242 4252.777522 4128.605669 4401.529155 4444.66057 1.048446191 0.998261088 1.013878909 1.019510762 0.992828922 0.945081897 0.956828413 0.928891105 0.990295903 1 12.11785753 -6.538637956 3.638783469 0.959452093 1.017501165 0.568063953 0.022654592 0.157086219 4.503454248 0.007334841 0.007692296 2.89E-07 6.538637956 0.058049072 S(ph)PQLSDFGLER ddPTM_A459_MK2206_30min_R2 4 SPQLSDFGLER 11 0 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER 163.62 0.0006406 118383400 75963.4 101332.1 101050.7 97897.5 89848.6 67022.8 108499.1 64358.1 70507 89352.9 TRUE FALSE 81779.21631 96300.09526 104419.6799 89898.96109 86320.69251 69573.39962 94253.03784 72769.92464 76639.57141 86437.32219 0.946110016 1.114103177 1.208039274 1.040047966 0.998650702 0.804899988 1.090420613 0.841880831 0.886649071 1 16.39936676 -6.327027534 2.885175999 0.924488078 1.092650986 0.346503755 0.097148582 0.287554351 4.714831398 0.031586294 0.037793902 4.71E-07 6.327027534 0.168162908 S(ph)PQNQYPAELMR ddPTM_A459_MK2206_30min_R1 2 SPQNQYPAELMR 12 0 P33993;P33993-2;C9J8M6 P33993 MCM7 DNA replication licensing factor MCM7 1 S(1)PQNQYPAELMR;S(1)PQNQYPAELMR 115.06 0.0053478 12305500 1201.5 1445.84 1329.5 1074.14 1154.54 1047.18 1499.94 1245.97 1488.93 1460.76 TRUE FALSE 1099.306116 1351.715553 1239.257244 1156.870449 1108.552227 1106.470427 1399.881739 1235.076616 1643.709602 1641.729977 0.669602268 0.82334828 0.754848399 0.704665484 0.6752342 0.673966147 0.852686958 0.752301921 1.001205816 1 10.68100114 -8.201175838 1.659638444 1.018597005 0.729879884 0.73700868 0.061712669 0.189090569 0.952595676 0.057555621 0.017565996 6.29E-09 8.201175838 -0.288717121 S(ph)PQNQYPAELMR ddPTM_A459_MK2206_30min_R2 1 SPQNQYPAELMR 12 0 P33993;P33993-2;C9J8M6 P33993 MCM7 DNA replication licensing factor MCM7 1 S(1)PQNQYPAELMR 98.676 0.015065 6959100 5714.5 2871.5 5071.5 1977.5 5316.5 2431.1 6213.7 2961.9 5011.1 5333.5 TRUE FALSE 6152.006514 2728.905486 5240.581279 1815.931924 5107.747497 2523.617214 5397.833726 3349.0305 5446.95642 5159.468332 1.192372182 0.528912149 1.015721183 0.351961056 0.989975549 0.489123501 1.046199604 0.6491038 1.055720487 1 12.33300669 -8.275753993 24.33019993 1.027860336 0.773733337 0.121260782 0.262817831 1229.044936 2088948.555 0.223303311 0.05884768 5.30E-09 8.275753993 -0.254126999 S(ph)PQPARPGSAAVPGAAFAPIPR ddPTM_A459_MK2206_30min_R2 2 SPQPARPGSAAVPGAAFAPIPR 22 1 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(0.962)PQPARPGS(0.038)AAVPGAAFAPIPR;S(0.999)PQPARPGS(0.001)AAVPGAAFAPIPR 82.302 0.00051285 19156500 27257.1 40190 27288.5 38290 41761 28541.5 40846 28173.5 30008.1 28984.3 TRUE FALSE 29343.92453 38194.22304 28198.28497 35161.58452 40121.25331 29627.66678 35482.87114 31855.87318 32618.1503 28038.54466 1.04655662 1.362204191 1.005697168 1.254044564 1.43093209 1.056676341 1.265503312 1.136145744 1.163332501 1 14.77512385 -8.905039448 0.909824565 0.99998943 1.206702129 0.166708697 0.131124619 2.241917749 3.201330634 0.123214976 0.040602471 1.24E-09 8.905039448 0.206712699 S(ph)PQPDPVDTPASTK ddPTM_A459_MK2206_30min_R1 1 SPQPDPVDTPASTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(1)PQPDPVDTPASTK 92.211 0.024377 0 536.01 769.33 870.31 476.65 490.95 579.81 588.43 453.13 523.16 703.14 TRUE FALSE 490.4195348 719.2464772 811.235782 513.3616656 471.3944219 612.6383411 549.1769084 449.1683322 577.5443541 790.2502916 0.620587604 0.91015022 1.026555498 0.649619078 0.59651281 0.775245954 0.694940469 0.56838743 0.730837255 1 9.626165852 -5.795510015 24.99994233 0.695071443 0.858203477 0.14108256 0.146975999 274.7218608 201580.9619 0.040268716 0.059731514 1.60E-06 5.795510015 0.163132034 S(ph)PQPDPVDTPASTK ddPTM_A459_MK2206_30min_R2 1 SPQPDPVDTPASTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(1)PQPDPVDTPASTK 104.87 0.0060228 2186300 10512 11138 8949.7 8861.8 6251.8 6479.4 14485 11293 6250.9 7601.4 TRUE FALSE 11316.8068 10584.90312 9248.078531 8137.762593 6006.322919 6725.978107 12583.1021 12769.03387 6794.591983 7353.366941 1.538996611 1.439463473 1.257665856 1.106671632 0.81681262 0.914680059 1.7112028 1.736488058 0.924011006 1 12.84418926 -1.522878796 0.01847179 7.84E-10 2.833514277 0.060808482 0.31521907 18904.17164 27.02853702 1573.977675 2715.387859 0.029999996 1.522878796 2.833514276 S(ph)PQPPSR ddPTM_A459_MK2206_30min_R1 2 SPQPPSR 7 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 S(1)PQPPSR;S(1)PQPPSR 88.134 0.032677 261610000 3679.6 3665.6 3177.4 2756.4 2856 3002.8 3431.5 3282.8 1419.37 2402.1 TRUE FALSE 3366.630698 3426.968774 2961.726941 2968.698406 2742.239472 3172.815941 3202.590896 3254.098826 1566.918591 2699.690283 1.247043307 1.269393306 1.097061748 1.099644068 1.015760767 1.175251828 1.186280855 1.205360054 0.580406797 1 11.39857819 -8.244885802 24.85539315 0.790203385 1.157692693 0.613750764 0.117931355 415.9265533 624521.2775 0.078195293 0.029370505 5.69E-09 8.244885802 0.367489309 S(ph)PQPPSR ddPTM_A459_MK2206_30min_R2 1 SPQPPSR 7 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 S(1)PQPPSR 88.134 0.032677 323630000 58317 54239 41555 68138 44275 66830 55886 40027 54558 53142 TRUE FALSE 62781.79436 51545.57013 42940.42296 62570.90744 42536.54104 69373.26248 48548.10107 45258.66633 59303.35622 51407.98089 1.221246065 1.002676418 0.835287094 1.217143843 0.827430689 1.349464836 0.944368953 0.880382103 1.153582677 1 15.64970473 -7.641799103 0.006932589 1.03E-06 2.061079052 0.009800248 0.171637258 20222.79588 122.5851626 18128.55325 18302.59142 2.28E-08 7.641799103 2.061078025 S(ph)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK ddPTM_A459_MK2206_30min_R1 4 SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 30 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(0.828)PQPPVEEEDEHFDDT(0.172)VVCLDTYNCDLHFK;S(0.916)PQPPVEEEDEHFDDT(0.083)VVCLDTYNCDLHFK;S(0.995)PQPPVEEEDEHFDDT(0.005)VVCLDTYNCDLHFK 152.99 2.18E-20 114451000 15280 16114.1 15740.8 12802.3 15241.5 13123.5 16837.2 15923.7 16855.8 21097.2 TRUE FALSE 13980.35576 15065.06916 14672.35835 13788.33536 14634.39878 13866.54123 15714.02111 15784.48077 18608.02073 23710.88041 0.589617742 0.635365237 0.618802765 0.581519333 0.61720183 0.584817644 0.662734611 0.665706228 0.784788266 1 14.53326161 -8.616665871 1.009494686 1.000551154 0.606404379 0.973579714 0.019916525 0.090454782 0.197413345 0.018570227 0.006102757 2.42E-09 8.616665871 -0.394146775 S(ph)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK ddPTM_A459_MK2206_30min_R2 2 SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 30 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.998)PQPPVEEEDEHFDDT(0.002)VVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK 106.51 4.33E-11 15840500 66547 59518 59008 64555 50779 53281 62645 53517 48807 58970 TRUE FALSE 71641.88949 56562.42267 60975.29727 59280.65 48785.16132 55308.64579 54419.63625 60511.85565 53052.14464 57045.81373 1.255865852 0.991526266 1.068882943 1.039176166 0.855192662 0.969547845 0.953963713 1.060758918 0.929991899 1 15.7998334 -1.829931751 1.065090137 0.975466886 200 0.628523788 0.061816446 775.6517022 1.626360785 0.019363897 376185.9899 0.014793408 1.829931751 199.0245331 S(ph)PQPVCSPAGSEGTPK ddPTM_A459_MK2206_30min_R1 1 SPQPVCSPAGSEGTPK 16 0 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 S(0.718)PQPVCS(0.27)PAGS(0.011)EGTPK 107.97 0.0032267 4238400 2845.2 2632.8 2635.4 2078 2410.4 2303.3 2454.4 2218 2061.4 2054.2 TRUE FALSE 2603.200799 2461.404241 2456.516391 2238.04792 2314.388664 2433.710856 2290.671454 2198.60826 2275.689907 2308.689804 1.127566291 1.066147664 1.06403051 0.969401743 1.002468439 1.054152382 0.992195422 0.952318608 0.985706223 1 11.17285863 -1.52287891 0.44778866 0.985365562 4.25515538 0.701019724 0.028191876 50.64983098 0.613144585 0.018932438 151.2075431 0.029999989 1.52287891 3.269789819 S(ph)PQPVCSPAGSEGTPK ddPTM_A459_MK2206_30min_R2 1 SPQPVCSPAGSEGTPK 16 0 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 S(0.531)PQPVCS(0.416)PAGS(0.052)EGT(0.001)PK 108.68 0.0031014 10511000 34712 34782 31375 37774 32032 27683 38231 33439 29016 38430 TRUE FALSE 37369.57741 33054.77646 32421.02684 34687.74337 30774.26273 28736.49596 33211.22378 37809.59211 31539.75923 37176.03225 1.005206181 0.889142129 0.872094865 0.93306739 0.827798473 0.77298448 0.893350413 1.017042159 0.848389603 1 15.18208518 -10.65214215 5.044205488 1.000004313 0.893609029 0.162192453 0.071172755 3.58E-06 6.18E-07 0.07152349 0.017346291 2.23E-11 10.65214215 -0.106395283 S(ph)PQQSAALPR ddPTM_A459_MK2206_30min_R1 2 SPQQSAALPR 10 0 E5RJN3;A0A0A6YYG7;Q6IBW4-2;Q6IBW4;Q6IBW4-4 E5RJN3 NCAPH2 Condensin-2 complex subunit H2 1 S(1)PQQSAALPR;S(0.999)PQQS(0.001)AALPR 151.7 0.00066191 57781000 1409.17 1120.51 1033.66 1022.91 1079.76 1149.78 1666.5 1238.2 1254.93 1156.38 TRUE FALSE 1289.312692 1047.564595 963.4980391 1101.694705 1036.750873 1214.87955 1555.330826 1227.374548 1385.384464 1299.641085 0.992052888 0.806041458 0.741357018 0.847691504 0.797720913 0.934780813 1.196738734 0.944395004 1.065974661 1 10.34389754 -7.002024946 6.213480753 1.05021583 0.83312287 0.589134018 0.084496762 0.103714539 17.59590414 0.030699752 0.025602289 9.95E-08 7.002024946 -0.21709296 S(ph)PQQSAALPR ddPTM_A459_MK2206_30min_R2 4 SPQQSAALPR 10 0 E5RJN3;A0A0A6YYG7;Q6IBW4-2;Q6IBW4;Q6IBW4-4 E5RJN3 NCAPH2 Condensin-2 complex subunit H2 1 S(1)PQQSAALPR;S(1)PQQSAALPR;S(1)PQQSAALPR;S(1)PQQSAALPR 121.21 0.0048484 125539000 94052 114175.5 56034.5 91916 100038.1 134423 84778 105030 68015 98430 TRUE FALSE 101252.6934 108505.7107 57902.66226 84406.16878 96110.10154 139538.5615 73646.54676 118757.7816 73930.82176 95218.23716 1.063375005 1.139547569 0.60810475 0.886449606 1.009366529 1.465460458 0.773450013 1.247216764 0.776435523 1 16.5389503 S(ph)PQQTVPYVVPLSPK ddPTM_A459_MK2206_30min_R1 2 SPQQTVPYVVPLSPK 15 0 Q9UQR0;H0Y6S1;B4DRC2 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 1 S(1)PQQTVPYVVPLSPK;S(1)PQQTVPYVVPLSPK 246.63 7.72E-28 22225000 3469.8 3674.8 4131.2 2775.7 3162.2 3589 3504.7 3377.5 3429.4 3651.3 TRUE FALSE 3174.675289 3435.569852 3850.785654 2989.484895 3036.242878 3792.206078 3270.907858 3347.970874 3785.898402 4103.65061 0.773622219 0.837198431 0.938380486 0.728494012 0.739888252 0.924105495 0.797072697 0.815851833 0.922568406 1 12.00269219 -8.464149664 2.808474378 0.999020604 0.82074811 0.449941837 0.065446941 0.230955207 3.929117371 0.063921192 0.017222122 3.43E-09 8.464149664 -0.178272493 S(ph)PQQTVPYVVPLSPK ddPTM_A459_MK2206_30min_R2 2 SPQQTVPYVVPLSPK 15 0 Q9UQR0;H0Y6S1;B4DRC2 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 1 S(1)PQQTVPYVVPLSPK;S(1)PQQTVPYVVPLSPK 228.7 8.90E-14 19921400 119264 125019 138901 152069 151465 141325 168076 122659 132933 148350 TRUE FALSE 128394.9435 118810.7383 143531.89 139644.4763 145517.723 146703.2219 146007.4193 138690.9525 144495.2721 143509.3516 0.894679978 0.827895443 1.000157052 0.973068825 1.013994708 1.022255485 1.017407003 0.966424493 1.006870078 1 17.13078523 -5.269887866 24.98634303 0.999774414 0.861287709 0.857332728 0.022637499 179.6937585 531444.0207 0.005868238 0.012542474 5.37E-06 5.269887866 -0.138486704 S(ph)PQSDPADT(ph)PTNTK ddPTM_A459_MK2206_30min_R2 1 SPQSDPADTPTNTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 S(0.785)PQS(0.215)DPADT(1)PTNTK 163.91 0.045148 3363700 14403 12573 8342.7 11920 10513 8351.1 13190 13369 7574.2 11965 TRUE FALSE 15505.70475 11948.6431 8620.841454 10946.09787 10100.2068 8668.906962 11458.13716 15116.3742 8232.990225 11574.58303 1.339633982 1.032317369 0.74480795 0.94570127 0.872619495 0.748960627 0.989939519 1.305997301 0.711299077 1 13.4986726 -4.820408019 3.598257443 0.920465476 1.370045425 0.378419365 0.163727454 0.273602066 5.979788604 0.041831397 0.31058485 1.51E-05 4.820408019 0.449579949 S(ph)PQSDPADTPTNTK ddPTM_A459_MK2206_30min_R1 1 SPQSDPADTPTNTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.999)PQS(0.001)DPADTPTNTK 102.72 0.0073923 5570800 1127 1075.3 1152.3 673.69 893.1 894.72 1219.6 1036.5 1138.1 905.33 TRUE FALSE 1031.142732 1005.297775 1074.085086 725.5777205 857.5259358 945.3782732 1138.242709 1027.43799 1256.409568 1017.489115 1.013418931 0.98801821 1.055623171 0.713106125 0.842786348 0.929128635 1.11867802 1.009777868 1.234813767 1 9.990797646 -7.252089012 20.15496687 1.09163223 0.919353394 0.363967412 0.10814697 55.72926961 120126.7871 0.043985294 0.033391582 5.60E-08 7.252089012 -0.172278837 S(ph)PQSDPADTPTNTK ddPTM_A459_MK2206_30min_R2 2 SPQSDPADTPTNTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.999)PQSDPADTPTNTK;S(1)PQSDPADTPTNTK 223.14 3.03E-51 6278800 47914 33707 25859 39383 26068 28284 71689 78460 14551.2 33822 TRUE FALSE 51582.33268 32033.15939 26721.12615 36165.28292 25044.43934 29360.36744 62276.14819 88714.99139 15816.83707 32718.39091 1.576554691 0.979056687 0.816700498 1.105350291 0.765454493 0.897365874 1.903398867 2.711471711 0.48342344 1 14.99781418 -7.254471391 24.67068247 1.667196154 1.004000414 0.131300002 0.58607513 688.1117922 2436316.27 0.220874543 0.167225245 5.57E-08 7.254471391 -0.66319574 S(ph)PQTLAPVGEDAMK ddPTM_A459_MK2206_30min_R2 2 SPQTLAPVGEDAMK 14 0 Q92797 Q92797 SYMPK Symplekin 1 S(0.995)PQT(0.005)LAPVGEDAMK;S(0.999)PQT(0.001)LAPVGEDAMK 132.4 0.003076 18591400 102721 104045 86895 86777 87899 82143 119014 81763 69962 96820 TRUE FALSE 110585.3987 98878.2766 89792.03593 79687.04151 84447.6436 85269.00943 103387.3188 92449.70483 76047.1683 93660.77133 1.180701346 1.055706409 0.958694175 0.850804882 0.901633015 0.910402597 1.10384868 0.987069651 0.81194258 1 16.5151573 -4.96192729 2.185079871 0.939786773 1.199147462 0.494251254 0.077258679 0.397513486 2.925306397 0.022094943 0.175749792 1.09E-05 4.96192729 0.259360689 S(ph)PQVKPASTMGMGPLGK ddPTM_A459_MK2206_30min_R1 2 SPQVKPASTMGMGPLGK 17 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 S(1)PQVKPASTMGMGPLGK;S(1)PQVKPASTMGMGPLGK 93.51 0.0040127 75269000 9484.5 9803.5 8944.6 7054.4 8026.6 7304.9 9203.4 7629.4 8884.7 8482.4 TRUE FALSE 8677.79347 9165.290368 8337.465473 7597.73111 7706.883525 7718.497125 8589.457979 7562.69696 9808.296359 9533.263751 0.9102647 0.961401112 0.874565699 0.796970619 0.808420256 0.809638475 0.900998672 0.793295681 1.028849785 1 13.2187545 -8.272797424 24.97475622 1.014424929 0.857288682 0.580595001 0.053537943 632.8991519 1391641.494 0.054579406 0.01460264 5.34E-09 8.272797424 -0.157136247 S(ph)PQVKPASTMGMGPLGK ddPTM_A459_MK2206_30min_R2 1 SPQVKPASTMGMGPLGK 17 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 S(0.993)PQVKPAS(0.003)T(0.003)MGMGPLGK 60.669 0.032496 34893000 101760 102970 111250 119390 118340 95181 149060 97979 85456 126550 TRUE FALSE 109550.8238 97856.65953 114959.0195 109635.4551 113693.377 98803.17965 129488.2429 110785.1917 92888.80841 122420.6839 0.89487185 0.799347434 0.939048989 0.895563165 0.92871052 0.807079135 1.05773174 0.904954851 0.758767273 1 16.90148781 -5.272068359 24.69640326 0.9096288 0.847109638 0.086886003 0.083299986 1376.121664 3197419.902 0.021296846 0.045096021 5.34E-06 5.272068359 -0.062519162 S(ph)PQVLGSSLSVR ddPTM_A459_MK2206_30min_R2 1 SPQVLGSSLSVR 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 S(1)PQVLGSSLSVR 105.14 0.0094489 8619000 10456 19921 19623 44825 23342 40586 14405 19277 26742 16382 TRUE FALSE 11256.5194 18931.75211 20277.22103 41162.65411 22425.4758 42130.52867 12513.6062 21796.57009 29067.97082 15847.45668 0.710304475 1.194624001 1.279525253 2.597429666 1.415083584 2.658504107 0.789628673 1.375398622 1.834235701 1 13.9519637 -3.343719624 11.17340262 1.524288782 1.354936227 0 0.649153265 0 0 0.148157236 0 0.00045319 3.343719624 -0.169352555 S(ph)PQVPAAQQMLNFPEK ddPTM_A459_MK2206_30min_R1 1 SPQVPAAQQMLNFPEK 16 0 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 S(1)PQVPAAQQMLNFPEK 156 0.00047432 0 1472.3 1323 1418.6 1230.8 1136.2 1450.9 1447.7 1184.9 1379.7 1341.7 TRUE FALSE 1347.073154 1236.87246 1322.309384 1325.596429 1090.942748 1533.048704 1351.126574 1174.540544 1523.124752 1507.919925 0.893332021 0.820250757 0.876909551 0.879089405 0.723475252 1.016664531 0.896020108 0.7789144 1.010083312 1 10.5583441 -6.772681454 24.99999804 0.923748813 0.841967798 0.27822665 0.079621911 366.4768091 814962.3669 0.027721943 0.024662539 1.69E-07 6.772681454 -0.081781015 S(ph)PRPGSSAPEHSPR ddPTM_A459_MK2206_30min_R2 1 SPRPGSSAPEHSPR 14 1 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 S(0.995)PRPGS(0.004)S(0.001)APEHSPR 67.019 0.037108 819870 2201.1 723.17 1007 733.17 962.53 760.26 595.25 2746 657.27 863.07 TRUE FALSE 2369.617908 687.2584294 1040.572877 673.2676657 924.7362359 789.192227 517.09296 3104.911628 714.4381565 834.9080966 2.83817814 0.823154587 1.246332239 0.806397337 1.107590452 0.945244429 0.619341173 3.718866353 0.855708741 1 9.70547359 S(ph)PRPTGSDLLPGAPILSLR ddPTM_A459_MK2206_30min_R1 2 SPRPTGSDLLPGAPILSLR 19 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 S(0.992)PRPT(0.006)GS(0.002)DLLPGAPILSLR;S(0.977)PRPT(0.019)GS(0.004)DLLPGAPILSLR 121.92 0.00023353 21004400 3480.5 3400.2 3368.5 3458.4 3268 3336.5 3825.1 3633.1 3952.2 4089.4 TRUE FALSE 3184.465198 3178.846362 3139.855605 3724.766567 3137.82864 3525.409747 3569.934558 3601.33619 4363.045333 4596.025745 0.692873664 0.691651122 0.683167541 0.81043205 0.682726515 0.767056135 0.776743812 0.783576157 0.949308288 1 12.16617116 -8.218096291 1.031914318 1.008878226 0.717939215 0.849075872 0.041164612 0.178687069 0.382845484 0.03845922 0.013266014 6.05E-09 8.218096291 -0.290939011 S(ph)PRPTGSDLLPGAPILSLR ddPTM_A459_MK2206_30min_R2 1 SPRPTGSDLLPGAPILSLR 19 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 S(0.999)PRPT(0.001)GSDLLPGAPILSLR 94.72 0.00098517 10449000 14070 15141 17426 16104 13324 13519 15880 11979 11462 15914 TRUE FALSE 15147.21002 14389.11996 18006.97414 14788.25169 12800.83281 14033.47502 13794.93692 13544.69643 12458.94404 15394.72748 0.983921933 0.934678446 1.169684502 0.960604967 0.831507594 0.911576709 0.896081918 0.87982697 0.809299421 1 13.91014871 -6.002188099 24.99609894 0.8847489 1.027485215 0.431134809 0.073084857 79.3997724 907063.4135 0.020261106 0.029517395 9.95E-07 6.002188099 0.142736315 S(ph)PSAGDVHILTGFAK ddPTM_A459_MK2206_30min_R2 2 SPSAGDVHILTGFAK 15 0 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 S(0.5)PS(0.5)AGDVHILTGFAK;S(0.898)PS(0.102)AGDVHILTGFAK 110.04 0.0023796 22733500 110427 106325 108646 116360 105502 97236 121082 96686 83182 121881 TRUE FALSE 118881.376 101045.0551 112268.2034 106853.0158 101359.4614 100936.3841 105183.788 109323.1922 90417.02 117904.033 1.00828931 0.857011016 0.952199858 0.906271084 0.859677645 0.856089326 0.892113572 0.927221821 0.766869612 1 16.84725354 -6.00777367 6.189533998 0.87928234 0.93090684 0.12105447 0.065192075 0.327988107 54.38939552 0.01778525 0.024844676 9.82E-07 6.00777367 0.0516245 S(ph)PSAGILR ddPTM_A459_MK2206_30min_R2 1 SPSAGILR 8 0 F5GX58;F8WDL1;Q99618;J3KMY0 F5GX58 CDCA3 Cell division cycle-associated protein 3 1 S(0.981)PS(0.019)AGILR 81.95 0.042493 10183000 17111 9443.2 13733 11530 10533 8630.2 12517 11207 10682 15253 TRUE FALSE 18421.03132 8974.26442 14190.85137 10587.96212 10119.4215 8958.628308 10873.50286 12671.79338 11611.10105 14755.29586 1.248435239 0.608206335 0.961746311 0.717570303 0.685816238 0.60714664 0.736922049 0.858796293 0.786910758 1 13.84894523 -4.74981788 24.98710058 0.764291962 1.248436319 0.554810149 0.127333068 383.7684782 825079.2832 0.030791977 0.483551522 1.78E-05 4.74981788 0.484144357 S(ph)PSAIPEQNHSLNDQAK ddPTM_A459_MK2206_30min_R1 1 SPSAIPEQNHSLNDQAK 17 0 Q13129 Q13129 RLF Zinc finger protein Rlf 1 S(0.996)PS(0.004)AIPEQNHSLNDQAK 198.51 6.97E-08 4528900 642.28 409.82 303.05 397.31 726.96 519.61 582.19 636.68 430.06 367.53 TRUE FALSE 587.6507133 383.1406435 282.4798103 427.910885 698.0036438 549.0298692 543.3531674 631.1135739 474.766276 413.0623911 1.422668163 0.927561191 0.683867175 1.035947339 1.689826183 1.329169348 1.315426384 1.527889218 1.149381513 1 8.6902159 -6.031459692 24.06297105 1.360606301 0.979138798 0.281949941 0.245074582 458.1103501 350400.0097 0.071243314 0.092094904 9.30E-07 6.031459692 -0.381467503 S(ph)PSAIPEQNHSLNDQAK ddPTM_A459_MK2206_30min_R2 3 SPSAIPEQNHSLNDQAK 17 0 Q13129 Q13129 RLF Zinc finger protein Rlf 1 S(1)PSAIPEQNHSLNDQAK;S(0.5)PS(0.5)AIPEQNHSLNDQAK;S(0.948)PS(0.052)AIPEQNHSLNDQAK 227.41 3.17E-16 39938500 128039.4 150566 147661 150328 138526 135113 183510 123613 136137.7 150786 TRUE FALSE 137842.1949 143089.1114 152583.944 138045.7215 133086.7732 140254.8199 159414.9166 139769.6435 147978.7111 145865.8652 0.944992818 0.980963649 1.046056552 0.946388117 0.912391484 0.961532842 1.09288706 0.95820666 1.014484855 1 17.15428278 S(ph)PSAPAATSSASSSTSSYK ddPTM_A459_MK2206_30min_R1 2 SPSAPAATSSASSSTSSYK 19 0 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 S(0.999)PS(0.001)APAATSSASSSTSSYK;S(0.999)PS(0.001)APAATSSASSSTSSYK 188.41 2.63E-15 37030000 1638.84 2121.09 2006.87 2320.5 1493.4 1457.73 1631.13 1649.74 1610.9 1636.48 TRUE FALSE 1499.448052 1983.006655 1870.649256 2499.225312 1433.914716 1540.265413 1522.320294 1635.316497 1778.35882 1839.219497 0.815263243 1.078178357 1.017088639 1.358851032 0.779632185 0.837456005 0.827699084 0.889136125 0.966909508 1 10.84487795 S(ph)PSAPAATSSASSSTSSYK ddPTM_A459_MK2206_30min_R2 4 SPSAPAATSSASSSTSSYK 19 0 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 S(0.988)PS(0.012)APAATSSASSSTSSYK;S(0.991)PS(0.009)APAATSSASSSTSSYK;S(0.995)PS(0.005)APAATSSASSSTSSYK;S(0.996)PS(0.004)APAATSSASSSTSSYK 233.57 5.14E-24 71243000 86959 86109 80946 92648 96155 74047 97765 83845 70427 99445 TRUE FALSE 93616.6479 81832.95227 83644.69924 85078.36203 92379.47156 76864.91047 84928.33806 94803.82938 76552.61316 96200.11779 0.973144836 0.850653348 0.869486453 0.884389375 0.960284391 0.799010565 0.882829876 0.985485585 0.795764235 1 16.55375104 -10.790547 4.463871598 1.000059596 0.889273106 0.216290025 0.063382576 3.56E-05 5.84E-06 0.058114156 0.014087177 1.62E-11 10.790547 -0.110786491 S(ph)PSAPAATSSASSSTSSYKR ddPTM_A459_MK2206_30min_R1 2 SPSAPAATSSASSSTSSYKR 20 1 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 S(0.848)PS(0.152)APAATSSASSSTSSYKR;S(0.831)PS(0.169)APAATSSASSSTSSYKR 92.679 0.00070049 14754500 2497.2 2434.4 2203.32 1758.83 2404.1 2581.5 2522.2 2116.55 1466.49 1708.29 TRUE FALSE 2284.800027 2275.920118 2053.764777 1894.295391 2308.339606 2727.662299 2353.94864 2098.045226 1618.936883 1919.925862 1.190045966 1.185420834 1.06971046 0.986650281 1.202306637 1.420712306 1.226062259 1.092774085 0.843228853 1 10.90683489 -8.064068459 4.584842845 0.926477563 1.180273583 0.464514194 0.110897141 0.220723349 9.032602048 0.087886905 0.032223846 8.63E-09 8.064068459 0.25379602 S(ph)PSAPAATSSASSSTSSYKR ddPTM_A459_MK2206_30min_R2 1 SPSAPAATSSASSSTSSYKR 20 1 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 S(0.5)PS(0.5)APAATSSASSSTSSYKR 120.39 0.00012868 15086000 24694 34038 28736 38239 42264 37218 36258 29919 34936 33133 TRUE FALSE 26584.59163 32347.72242 29694.0439 35114.75138 40604.503 38634.35707 31497.28105 33829.51603 37974.67013 32051.87292 0.829423968 1.009230334 0.926437091 1.095560046 1.266837139 1.205369719 0.982697052 1.055461442 1.184787866 1 14.96812104 -5.793139565 5.153537767 1.121577052 0.929237794 0.467741556 0.093353359 0.171532441 11.37990157 0.027643261 0.043456531 1.61E-06 5.793139565 -0.192339258 S(ph)PSASITDEDSNV ddPTM_A459_MK2206_30min_R2 2 SPSASITDEDSNV 13 0 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;H0YFE4 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.882)PS(0.117)ASITDEDSNV;S(0.629)PS(0.369)AS(0.002)ITDEDSNV 204.32 4.07E-05 16504600 65978 83807 76723 75813 77418 82302 77407 72387 81740 69578 TRUE FALSE 71029.32641 79645.26625 79280.90653 69618.83539 74378.18033 85434.06028 67243.36792 81848.22944 88849.59745 67307.67556 1.055293112 1.183301393 1.177888047 1.03433724 1.105047526 1.269306354 0.999044572 1.21603114 1.320051491 1 16.03848341 S(ph)PSASSLSSMSSVASSVSSR ddPTM_A459_MK2206_30min_R2 1 SPSASSLSSMSSVASSVSSR 20 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H0N7 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 S(0.593)PS(0.407)ASSLSSMSSVASSVSSR 152.66 8.23E-06 6036300 9853.8 15198 14511 23316 16012 24808 15246 16111 17700 16908 TRUE FALSE 10608.2145 14443.28942 14994.7895 21411.00822 15383.28843 25752.08582 13244.18189 18216.76302 19239.51401 16356.29334 0.648570815 0.883041721 0.916759634 1.30903792 0.940511894 1.574445095 0.809730029 1.113746411 1.17627592 1 13.99755822 -5.138429948 1.510161169 1.131704617 0.633293209 0.354671624 0.203148372 0.660721037 2.20762399 0.057335765 0.402719415 7.27E-06 5.138429948 -0.498411408 S(ph)PSDSGYSYETIGK ddPTM_A459_MK2206_30min_R1 3 SPSDSGYSYETIGK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.995)PS(0.005)DSGYSYETIGK;S(0.965)PS(0.034)DS(0.001)GYSYETIGK;S(1)PSDSGYSYETIGK 296.49 8.67E-68 317077000 9772.8 10138.2 9521.8 6292.1 7809.5 7634.2 11249.4 7442.1 11351.4 14092.8 TRUE FALSE 8941.572041 9478.201337 8875.486745 6776.718632 7498.431078 8066.441807 10498.97305 7377.034504 12531.41865 15838.72246 0.564538716 0.598419561 0.560366328 0.427857654 0.473423983 0.509286139 0.662867417 0.46575944 0.791188726 1 13.95116835 -8.488298951 3.299596241 0.998685964 0.534400754 0.839247344 0.066482506 0.081875663 2.047409396 0.067040319 0.017785337 3.25E-09 8.488298951 -0.46428521 S(ph)PSDSGYSYETIGK ddPTM_A459_MK2206_30min_R2 3 SPSDSGYSYETIGK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.964)PS(0.028)DS(0.008)GYSYETIGK;S(0.603)PS(0.397)DSGYSYETIGK;S(0.963)PS(0.033)DS(0.002)GYS(0.001)YETIGK 134.06 0.00067574 284020000 281959 207194 223485 185650 233118 189771 248776 209073 153242.6 225686 TRUE FALSE 303545.9978 196905.0472 230935.8784 170481.8011 223964.616 196992.8684 216111.4124 236399.559 166571.3643 218321.8843 1.390359921 0.901902472 1.057777048 0.780873625 1.025845928 0.902304728 0.98987517 1.082802852 0.762962288 1 17.73609723 -4.757760245 24.99998051 0.948515974 1.390360548 0.624819489 0.103515467 65.76909776 446839.9361 0.023869168 0.1726396 1.75E-05 4.757760245 0.441844573 S(ph)PSDSSTASTPVAEQIER ddPTM_A459_MK2206_30min_R1 2 SPSDSSTASTPVAEQIER 18 0 Q16643-3;Q16643;Q16643-2;D6R9Q9 Q16643-3 DBN1 Drebrin 1 S(0.86)PS(0.14)DSSTASTPVAEQIER;S(0.993)PS(0.007)DSSTASTPVAEQIER 287 1.41E-80 97045000 930.58 973.92 774.67 570.22 851.15 835.08 1159.2 868.11 1081.02 1387.45 TRUE FALSE 851.4292843 910.517631 722.0875588 614.1384432 817.2468932 882.3615079 1081.871883 860.5202058 1193.395897 1559.337781 0.546019788 0.583913019 0.463073215 0.393845677 0.524098693 0.565856557 0.693802136 0.551849777 0.765322249 1 10.60671776 -8.666428801 0.574030855 1.01086934 0.499018633 0.828275351 0.067969422 0.449582804 0.332053231 0.081508806 0.033951741 2.16E-09 8.666428801 -0.511850706 S(ph)PSDSSTASTPVAEQIER ddPTM_A459_MK2206_30min_R2 3 SPSDSSTASTPVAEQIER 18 0 Q16643-3;Q16643;Q16643-2;D6R9Q9 Q16643-3 DBN1 Drebrin 1 S(0.999)PS(0.001)DSSTASTPVAEQIER;S(0.971)PS(0.029)DSSTASTPVAEQIER;S(1)PSDSSTASTPVAEQIER 292.2 6.72E-81 111626000 27521.5 21970.4 26356.2 33767 23623.7 24121.5 33119 23758.3 18275.5 27850.2 TRUE FALSE 29628.5672 20879.38188 27234.90255 31008.12808 22696.11484 25039.46059 28770.43552 26863.59138 19865.06996 26941.45025 1.099739135 0.774991015 1.010892224 1.150945023 0.842423649 0.929402848 1.067887409 0.997110071 0.737342265 1 14.71753989 -8.155922225 22.13910387 0.868022425 0.979892368 0.123417036 0.122699216 23.9032425 4990.533015 0.080702655 0.030502724 6.98E-09 8.155922225 0.111869943 S(ph)PSEAADEVCALEEK ddPTM_A459_MK2206_30min_R2 2 SPSEAADEVCALEEK 15 0 Q9H6Z4;Q9H6Z4-3;K7EN31 Q9H6Z4 RANBP3 Ran-binding protein 3 1 S(0.941)PS(0.059)EAADEVCALEEK;S(0.985)PS(0.015)EAADEVCALEEK 175.66 4.15E-09 1982100 12882.7 9965.7 9818.6 12083.3 9839.8 10326.5 11629.5 8692.3 8698.9 13395.4 TRUE FALSE 13869.00942 9470.817829 10145.94722 11096.05574 9453.440011 10719.48219 10102.53268 9828.413455 9455.514598 12958.3092 1.070279248 0.730868332 0.782968447 0.856288855 0.729527276 0.827228463 0.779618122 0.758464188 0.729687373 1 13.66158987 -4.753808114 24.99474453 0.791189013 1.070279747 0.514926298 0.078507622 202.5044243 663210.0005 0.01781448 0.185282105 1.76E-05 4.753808114 0.279090734 S(ph)PSEAADEVCALEEKEPQK ddPTM_A459_MK2206_30min_R1 1 SPSEAADEVCALEEKEPQK 19 1 Q9H6Z4;Q9H6Z4-3;K7EN31 Q9H6Z4 RANBP3 Ran-binding protein 3 1 S(0.706)PS(0.294)EAADEVCALEEKEPQK 77.051 0.0045819 3031300 486.84 584.62 342.45 277.67 496.96 578.02 652.84 634.52 580.55 789.92 TRUE FALSE 445.4317015 546.5611317 319.2054481 299.0561915 477.1650309 610.7469929 609.2902348 628.9724585 640.90025 887.7812532 0.501735872 0.615648427 0.359554166 0.336857971 0.537480409 0.687947612 0.686306714 0.708476842 0.721912349 1 9.794060434 -8.029033654 0.465383026 0.991863366 0.445878127 0.753568531 0.091568681 0.518553212 0.292354151 0.115324579 0.074529526 9.35E-09 8.029033654 -0.545985238 S(ph)PSELFAQHIVTIVHHVK ddPTM_A459_MK2206_30min_R1 1 SPSELFAQHIVTIVHHVK 18 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.5)PS(0.5)ELFAQHIVTIVHHVK 138.46 0.00017441 4198500 1725.3 1749.7 2134.9 1622.6 2012.7 1786.5 1773.4 1688.7 1636.7 1521.5 TRUE FALSE 1578.554175 1635.794212 1989.988936 1747.572933 1932.529897 1887.650086 1655.099722 1673.935874 1806.840822 1709.994907 0.923133846 0.956607652 1.163739686 1.021975519 1.130137809 1.103892227 0.967897457 0.978912784 1.056635207 1 10.73977631 -10.57391462 14.70466067 1.000013445 1.036234109 0.016460269 0.075736639 0 0 0.076916174 0.018654912 2.67E-11 10.57391462 0.036220664 S(ph)PSFASEWDEIEK ddPTM_A459_MK2206_30min_R1 1 SPSFASEWDEIEK 13 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.981)PS(0.019)FASEWDEIEK 194.12 0.00019192 3892800 945.24 1363.7 942.68 893.52 1098.1 873.13 1019.9 811.6 1097.5 871.71 TRUE FALSE 864.8423743 1274.922882 878.6935081 962.3390652 1054.360352 922.5658661 951.8643319 804.5042668 1211.589052 979.7040159 0.882758834 1.301334752 0.896896914 0.982275309 1.07620295 0.941678151 0.971583577 0.821170735 1.23668887 1 9.936202144 S(ph)PSFASEWDEIEK ddPTM_A459_MK2206_30min_R2 1 SPSFASEWDEIEK 13 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.508)PS(0.492)FASEWDEIEK 147.52 0.00057106 5386300 10827 10470 9550.8 10604 10803 9674.1 11267 10264 8643.8 9325.1 TRUE FALSE 11655.92344 9950.075025 9869.218905 9737.619279 10378.81994 10042.25465 9787.629366 11605.54004 9395.6221 9020.822751 1.292113122 1.10301192 1.094048645 1.079460217 1.150540281 1.113230459 1.085004066 1.286527888 1.041548244 1 13.13904331 -8.50714648 24.55162365 0.99999995 1.142661927 0.330809449 0.074307209 577.8150776 901733.135 0.069895475 0.018046934 3.11E-09 8.50714648 0.142661978 S(ph)PSFGAGEGLLR ddPTM_A459_MK2206_30min_R1 1 SPSFGAGEGLLR 12 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 S(0.795)PS(0.205)FGAGEGLLR 126.5 0.0027261 17432000 1123.5 1133.1 1045.6 1263 998.39 822.21 913.27 1279.2 1103.6 911.54 TRUE FALSE 1027.940425 1059.334984 974.6275852 1360.276479 958.6220122 868.7628197 852.3474247 1268.016089 1218.323169 1024.468457 1.003389044 1.034033773 0.95134953 1.327787566 0.935726235 0.848013244 0.831989915 1.237730728 1.189224676 1 10.00065985 -7.78173122 24.99979638 1.160108267 0.995914499 0.192571448 0.140893992 415.0867795 511384.6549 0.080965595 0.038968518 1.65E-08 7.78173122 -0.164193767 S(ph)PSFGAGEGLLR ddPTM_A459_MK2206_30min_R2 1 SPSFGAGEGLLR 12 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 S(0.785)PS(0.215)FGAGEGLLR 80.17 0.040652 10651000 6184.9 7137.3 3410.9 9983 8282.9 9324 8499.3 6516.7 6563.1 6794.4 TRUE FALSE 6658.420699 6782.872061 3524.617704 9167.356966 7957.671728 9678.831354 7383.331701 7368.455065 7133.946575 6572.699284 1.013042041 1.03197663 0.536251173 1.394762877 1.21071593 1.472580889 1.123333258 1.12106986 1.085390684 1 12.68227026 -5.779530533 24.99999869 1.214635833 0.877578402 0.41715691 0.183726514 227.8399919 314849.2693 0.052137546 0.077504214 1.66E-06 5.779530533 -0.33705743 S(ph)PSFGDPQLS(ph)PEAR ddPTM_A459_MK2206_30min_R1 1 SPSFGDPQLSPEAR 14 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 2 S(1)PSFGDPQLS(1)PEAR 170.09 0.0030176 1778700 606.79 679.05 367.99 370.75 546.77 504.42 650.24 557.19 569.49 620.38 TRUE FALSE 555.1793241 634.8437216 343.0118641 399.3052292 524.9909931 532.9798245 606.863676 552.3185466 628.6905234 697.237358 0.796255848 0.910513062 0.491958528 0.572696263 0.752958784 0.76441662 0.87038319 0.79215283 0.901687949 1 9.445506061 -7.954304535 0.71917805 0.985120522 0.700309751 0.409341222 0.112810619 0.735758374 0.771951177 0.117029791 0.052817052 1.11E-08 7.954304535 -0.284810771 S(ph)PSFGDPQLS(ph)PEAR ddPTM_A459_MK2206_30min_R2 1 SPSFGDPQLSPEAR 14 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 2 S(1)PSFGDPQLS(1)PEAR 159.44 0.0054273 3509000 14330 12730 14380 15959 11560 9905.5 16289 12581 10332 12154 TRUE FALSE 15427.11582 12097.84671 14859.42202 14655.09865 11106.09632 10282.46074 14150.23473 14225.3799 11230.65868 11757.41598 1.312117888 1.028954554 1.263833997 1.246455742 0.944603503 0.874551072 1.203515701 1.209907001 0.955197869 1 13.5212834 -6.249028353 24.87309564 1.042564959 1.203348226 0.343640636 0.122040645 1019.906648 2044006.658 0.038123537 0.048858574 5.64E-07 6.249028353 0.160783268 S(ph)PSFGDPQLS(ph)PEARPR ddPTM_A459_MK2206_30min_R1 1 SPSFGDPQLSPEARPR 16 1 O95425-3 O95425-3 SVIL Supervillin 2 S(0.9)PS(0.1)FGDPQLS(1)PEARPR 89.917 0.02521 2347600 929.5 993.24 717.91 736.49 1119.1 1170.1 1037.7 776.37 909.91 802.51 TRUE FALSE 850.441144 928.5798955 669.1802694 793.2145874 1074.523877 1236.350051 968.4769264 769.5822789 1004.498401 901.9309974 0.942911538 1.029546493 0.741941758 0.879462608 1.191359295 1.370781195 1.073781619 0.853260705 1.11371979 1 9.816873254 -6.249360923 24.64616847 1.105326566 0.896648228 0.331065882 0.140568807 824.8850423 1683182.555 0.045885389 0.058748335 5.63E-07 6.249360923 -0.208678338 S(ph)PSFGGASEASAR ddPTM_A459_MK2206_30min_R1 1 SPSFGGASEASAR 13 0 H7C2F7;Q8WVT3 H7C2F7 TRAPPC12 Trafficking protein particle complex subunit 12 1 S(0.998)PS(0.002)FGGASEASAR 140.33 0.00088762 6665100 351.16 234.3 303 238.1 303.99 332.82 215.42 286.65 213.08 237.1 TRUE FALSE 321.291998 219.0470274 282.4332042 256.4385033 291.8814346 351.6639808 201.0497249 284.1438493 235.2304285 266.473738 1.205717308 0.822021071 1.059891329 0.962340624 1.095347845 1.319694704 0.754482323 1.066310892 0.882752763 1 8.057849547 -7.287498278 24.99933121 0.93141246 1.060665518 0.200641997 0.145784945 1518.792683 1457031.241 0.060507567 0.040807747 5.16E-08 7.287498278 0.129253058 S(ph)PSFGGASEASAR ddPTM_A459_MK2206_30min_R2 4 SPSFGGASEASAR 13 0 H7C2F7;Q8WVT3 H7C2F7 TRAPPC12 Trafficking protein particle complex subunit 12 1 S(0.998)PS(0.002)FGGASEASAR;S(0.996)PS(0.004)FGGASEASAR;S(0.996)PS(0.004)FGGASEASAR;S(0.998)PS(0.002)FGGASEASAR 206.46 1.23E-05 46254200 40295.3 46911.9 48557.3 58165.6 50006.7 38168.7 55565.1 58855.5 39670.8 50820.2 TRUE FALSE 43380.33915 44582.32326 50176.17615 53413.28442 48043.18569 39621.23662 48269.33562 66548.11593 43121.29448 49161.94104 0.882396794 0.906846278 1.020630494 1.086476313 0.977243467 0.805933122 0.981843569 1.353651108 0.877127582 1 15.58525426 -7.546465761 24.99702587 1.102783077 0.950731271 0.153554817 0.132663877 363.5691378 385298.2131 0.060880351 0.035151479 2.84E-08 7.546465761 -0.152051806 S(ph)PSGAGEGASCSDGPR ddPTM_A459_MK2206_30min_R1 1 SPSGAGEGASCSDGPR 16 0 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 S(0.688)PS(0.312)GAGEGASCSDGPR 139 0.00040322 3583800 147.07 209.88 263.63 205.76 390.7 375.79 508.86 389.9 338.79 338.07 TRUE FALSE 134.5609242 196.2167739 245.7355301 221.6076709 375.1375917 397.066905 474.9148779 386.4911454 374.0084329 379.9526639 0.354151812 0.516424261 0.646753013 0.583250736 0.987327179 1.045043088 1.249931697 1.017208674 0.984355338 1 8.569675883 -6.211598477 1.666898046 1.078936052 0.487175046 0.877993508 0.095888974 0.12395006 0.682326939 0.035457985 0.049550142 6.14E-07 6.211598477 -0.591761006 down S(ph)PSGGAAGPLLTPSQSLDGSR ddPTM_A459_MK2206_30min_R1 2 SPSGGAAGPLLTPSQSLDGSR 21 0 Q96CX2 Q96CX2 KCTD12 BTB/POZ domain-containing protein KCTD12 1 S(1)PSGGAAGPLLTPSQSLDGSR;S(0.977)PS(0.023)GGAAGPLLTPSQSLDGSR 246.9 9.10E-39 15597900 866.96 774.45 944.73 547.46 598.35 780.41 696.66 809.39 689.12 596.45 TRUE FALSE 793.2204994 724.0331642 880.6043598 589.6254641 574.5164525 824.5961398 650.1870825 802.3135886 760.75649 670.342729 1.18330589 1.080094007 1.31366288 0.879588065 0.857048831 1.230111261 0.969932326 1.196870726 1.134876918 1 9.388755087 -5.753167547 24.99873556 1.044135308 1.181128171 0.231341131 0.127850907 322.814289 975583.1476 0.036143569 0.061254894 1.77E-06 5.753167547 0.136992863 S(ph)PSGGAAGPLLTPSQSLDGSR ddPTM_A459_MK2206_30min_R2 4 SPSGGAAGPLLTPSQSLDGSR 21 0 Q96CX2 Q96CX2 KCTD12 BTB/POZ domain-containing protein KCTD12 1 S(0.994)PS(0.006)GGAAGPLLTPSQSLDGSR;S(1)PSGGAAGPLLTPSQSLDGSR;S(0.985)PS(0.015)GGAAGPLLTPSQSLDGSR;S(1)PSGGAAGPLLTPSQSLDGSR 246.67 1.73E-42 15503500 10074.4 11121.6 12464.1 11586.4 14992.7 13168.8 12649 9037.1 10552.8 13727.7 TRUE FALSE 10845.70381 10569.31752 12879.64687 10639.75406 14404.01127 13669.94791 10988.17111 10218.28 11470.66347 13279.76627 0.816708938 0.795896351 0.969869997 0.801200401 1.084658492 1.029381665 0.827437086 0.769462338 0.863769982 1 13.69694213 -5.244081074 23.78231486 0.912481424 0.806302602 0.16947523 0.098449691 883.4959637 1210452.006 0.026939473 0.070834212 5.70E-06 5.244081074 -0.106178822 S(ph)PSGHPHVR ddPTM_A459_MK2206_30min_R2 14 SPSGHPHVR 9 0 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;Q8WX93-4;Q8WX93-7 Q8WX93 PALLD Palladin 1 S(0.996)PS(0.004)GHPHVR;S(0.781)PS(0.219)GHPHVR;S(0.999)PS(0.001)GHPHVR;S(0.998)PS(0.002)GHPHVR;S(0.998)PS(0.002)GHPHVR;S(0.986)PS(0.014)GHPHVR;S(0.999)PS(0.001)GHPHVR;S(0.999)PS(0.001)GHPHVR;S(0.994)PS(0.006)GHPHVR;S(0.996)PS(0.004)GHPHVR;S(0.99)PS(0.01)GHPHVR;S(0.994)PS(0.006)GHPHVR;S(0.986)PS(0.014)GHPHVR;S(0.999)PS(0.001)GHPHVR 112.83 0.0062607 261582700 50492.32 39351.01 46126.11 54298.17 72085.32 59126.18 60910.85 152483.61 126209.05 66360.15 TRUE FALSE 54358.05084 37396.89607 47663.93149 49861.83582 69254.88814 61376.26821 52913.18223 172413.7414 137186.485 64194.82374 0.846766884 0.582553139 0.742488704 0.776726735 1.078823558 0.956093726 0.824259327 2.685788843 2.13703344 1 15.97016935 -7.742058473 24.98913889 2.058558196 0.829223608 0.604439314 0.408653454 131.122303 169065.425 0.183954535 0.106002657 1.81E-08 7.742058473 -1.229334588 S(ph)PSGLRPR ddPTM_A459_MK2206_30min_R1 1 SPSGLRPR 8 1 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4 P49815 TSC2 Tuberin 1 S(0.999)PS(0.001)GLRPR 82.241 0.022984 4107200 908.09 883.02 801.63 752.26 792.03 679.12 700.52 635.14 648.19 764.43 TRUE FALSE 830.8521769 825.5352375 747.2175891 810.1991955 760.4817679 717.5711875 653.789589 629.5870379 715.5716701 859.1333596 0.967081731 0.960893007 0.869734111 0.943042412 0.885173133 0.835226778 0.760987316 0.732816426 0.832899412 1 9.746738282 -6.650094718 2.305870086 0.808655955 0.932412993 0.290021187 0.071828473 0.316446362 3.435024683 0.026017496 0.025769967 2.24E-07 6.650094718 0.123757038 S(ph)PSGLRPR ddPTM_A459_MK2206_30min_R2 1 SPSGLRPR 8 1 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4 P49815 TSC2 Tuberin 1 S(0.996)PS(0.004)GLRPR 68.626 0.041932 5254900 3035.7 3183.4 1150.6 3134.9 2314.1 2567.9 2665.1 2930.7 1077.8 3134.7 TRUE FALSE 3268.115526 3025.316985 1188.96043 2878.768642 2223.236807 2665.623234 2315.169169 3313.752553 1171.545096 3032.414996 1.077727003 0.997659288 0.39208368 0.949332016 0.733157173 0.879043019 0.763473724 1.092776733 0.386340622 1 11.56625149 -5.022416258 24.95958356 0.779871546 1.057710311 0.186983455 0.222039598 994.1847394 1106989.643 0.05254256 0.141517731 9.50E-06 5.022416258 0.277838765 S(ph)PSGPPAMDLEGPR ddPTM_A459_MK2206_30min_R1 2 SPSGPPAMDLEGPR 14 0 O96018 O96018 APBA3 Amyloid beta A4 precursor protein-binding family A member 3 1 S(1)PSGPPAMDLEGPR;S(0.994)PS(0.006)GPPAMDLEGPR 156.2 0.00032265 14193400 742.92 646 814.29 853.3 849.31 603.8 809.89 808.65 873.55 735.33 TRUE FALSE 679.7307528 603.9452826 759.0182635 919.0213139 815.4801843 637.9866342 755.8637158 801.5800583 964.3586485 826.4282319 0.822492174 0.730789752 0.918432157 1.112040076 0.986752573 0.771980687 0.914615071 0.969933053 1.166899449 1 9.690745729 -5.416271676 4.922240261 0.978033433 0.779838827 0.396603171 0.102664086 0.242183925 8.952153325 0.02911847 0.062393147 3.83E-06 5.416271676 -0.198194606 S(ph)PSGPPAMDLEGPR ddPTM_A459_MK2206_30min_R2 2 SPSGPPAMDLEGPR 14 0 O96018 O96018 APBA3 Amyloid beta A4 precursor protein-binding family A member 3 1 S(1)PSGPPAMDLEGPR;S(0.999)PS(0.001)GPPAMDLEGPR 183.06 7.67E-05 13004600 4975.4 5854.6 7710 7654.4 7070.6 2610.37 8868.8 6446.3 3063.1 4773.6 TRUE FALSE 5356.320449 5563.869077 7967.047552 7029.011035 6792.972717 2709.70946 7704.315907 7288.853543 3329.522901 4617.837823 1.159919567 1.204864547 1.725276603 1.522143329 1.471028862 0.58679182 1.668381654 1.57841263 0.72101339 1 12.17300179 S(ph)PSGSAFGSQENLR ddPTM_A459_MK2206_30min_R2 1 SPSGSAFGSQENLR 14 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.995)PS(0.005)GSAFGSQENLR 92.269 0.015921 17871000 14234 22096 21784 17569 30956 29761 32622 15080 15043 26552 TRUE FALSE 15323.76598 20998.74477 22510.26769 16133.5565 29740.5119 30893.57571 28338.69221 17051.00778 16351.41295 25685.61041 0.59658952 0.817529521 0.876376591 0.628116531 1.157866658 1.202758089 1.103290588 0.663835023 0.636598184 1 14.64867274 -4.207679818 0.827966057 0.930840864 0.03197144 0.189924817 0.200837568 10.79011649 2.923135776 0.080400328 11.10922565 6.20E-05 4.207679818 -0.898869424 S(ph)PSGSQRPSVSDDTEHLVNGR ddPTM_A459_MK2206_30min_R2 1 SPSGSQRPSVSDDTEHLVNGR 21 1 P16144-4;P16144-2;P16144-3 P16144-4 ITGB4 Integrin beta-4 1 S(0.332)PS(0.332)GS(0.332)QRPS(0.003)VSDDTEHLVNGR 51.166 0.030474 5273800 2518.9 5053.7 4450.4 6164.5 4076.8 8379.5 6389.1 5899.1 5797 4195.8 TRUE FALSE 2711.748921 4802.740607 4598.774115 5660.840631 3916.724348 8698.387744 5550.203495 6670.132625 6301.212581 4058.89139 0.668100883 1.183264134 1.133012361 1.394676548 0.964973923 2.143045208 1.367418579 1.643338534 1.552446709 1 11.98687002 -4.518766498 0.62583841 1.517352062 2.01E-13 0.340576239 0.319564092 5.054388621 1.187574233 0.146539167 5.924237116 3.03E-05 4.518766498 -1.517352062 S(ph)PSHSGNAGDLK ddPTM_A459_MK2206_30min_R1 6 SPSHSGNAGDLK 12 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(0.891)PS(0.109)HSGNAGDLK;S(0.998)PS(0.002)HSGNAGDLK;S(0.975)PS(0.024)HS(0.002)GNAGDLK;S(0.974)PS(0.026)HSGNAGDLK;S(0.97)PS(0.03)HSGNAGDLK;S(0.99)PS(0.01)HSGNAGDLK 138.55 0.0012318 213972400 19616.7 18810.7 17814.6 15642.3 17459.5 15540.1 18024.8 18213.6 8424.76 14156.1 TRUE FALSE 17948.19665 17586.12001 16605.39459 16847.07266 16764.05114 16419.96703 16822.39848 18054.36042 9300.54395 15909.86454 1.128117503 1.105359506 1.043716906 1.05890736 1.053689119 1.032062026 1.057356487 1.134790329 0.584577193 1 13.95763393 -8.24140042 24.98143539 0.792288541 1.073102979 0.570137303 0.098759696 449.4550449 560312.1191 0.060643424 0.022858314 5.74E-09 8.24140042 0.280814438 S(ph)PSHSGNAGDLK ddPTM_A459_MK2206_30min_R2 4 SPSHSGNAGDLK 12 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(0.897)PS(0.102)HS(0.001)GNAGDLK;S(0.998)PS(0.002)HSGNAGDLK;S(0.997)PS(0.003)HSGNAGDLK;S(0.97)PS(0.029)HS(0.001)GNAGDLK 135.86 0.0014554 417919000 131447 137843 113648 131497 131423 95025 146040 115262 99667 120885 TRUE FALSE 141510.6834 130997.9171 117436.9676 120753.2745 126262.6727 98641.24296 126864.7726 130327.1392 108335.8555 116940.5324 1.210108083 1.120209686 1.004245194 1.032604111 1.079716931 0.843516281 1.084865701 1.114473626 0.926418354 1 16.83541554 -4.984500339 2.19700149 1.013935821 1.224766191 0.421635452 0.075638756 0.423330193 3.233983009 0.020406516 0.149432558 1.04E-05 4.984500339 0.21083037 S(ph)PSKPLPEVTDEYK ddPTM_A459_MK2206_30min_R2 1 SPSKPLPEVTDEYK 14 1 P05455;E9PFL9;E7ERC4;E9PGX9 P05455 SSB Lupus La protein 1 S(0.859)PS(0.141)KPLPEVTDEYK 78.529 0.02085 8442200 36802 28037 29851 23121 24223 17053 35444 24310 16082 36122 TRUE FALSE 39619.58942 26644.72335 30846.21744 21231.94034 23271.88331 17701.96386 30790.16022 27487.40047 17480.78329 34943.3421 1.1338237 0.762512163 0.882749491 0.607610465 0.665989053 0.506590463 0.881145259 0.78662769 0.500260772 1 15.09272998 S(ph)PSKPLPEVTDEYKNDVK ddPTM_A459_MK2206_30min_R2 3 SPSKPLPEVTDEYKNDVK 18 2 P05455;E9PFL9;E7ERC4;E9PGX9 P05455 SSB Lupus La protein 1 S(0.866)PS(0.134)KPLPEVTDEYKNDVK;S(0.5)PS(0.5)KPLPEVTDEYKNDVK;S(0.909)PS(0.09)KPLPEVTDEY(0.001)KNDVK 63.69 0.034746 36125100 129536 113809 135261 110286 128972 69954.3 155361 106348 94274.6 140245 TRUE FALSE 139453.3758 108157.4106 139770.5342 101275.281 123907.9112 72616.45991 134961.9141 120248.0487 102474.4343 135668.8171 1.027895567 0.797216434 1.030233308 0.74648901 0.91331165 0.535247977 0.994789495 0.886335204 0.755327838 1 17.04972964 -1.522904046 0.960502076 0.837934855 127.8140272 0.101415518 0.144062908 3068.727506 5.12761277 0.045042476 856395.7527 0.029998252 1.522904046 126.9760924 S(ph)PSKPTLAYPESNSR ddPTM_A459_MK2206_30min_R2 1 SPSKPTLAYPESNSR 15 1 F5GXS6;F5H6R3;F5H0C6;F5H1B0;F5GYW0;Q86XR8-3;Q86XR8-2;Q86XR8-4;Q86XR8-5;Q86XR8 F5GXS6 CEP57 Centrosomal protein of 57 kDa 1 S(0.949)PS(0.003)KPTLAYPES(0.047)NSR 133.86 0.0023776 4358400 6609.8 6348.7 5790.4 7066.9 5938.2 7050.6 8048.4 5975.3 4703.1 7665.7 TRUE FALSE 7115.85137 6033.43279 5983.449046 6489.511664 5705.036431 7318.915524 6991.635412 6756.292226 5112.167137 7415.568837 0.959582674 0.813616989 0.80687661 0.875119874 0.769332273 0.986966163 0.942831975 0.911095612 0.689383006 1 12.85634165 -6.755143026 24.99990907 0.902797365 0.842733282 0.097343398 0.092722122 403.9819545 1604024.448 0.030929606 0.03020054 1.76E-07 6.755143026 -0.060064083 S(ph)PSLDNPTPFPNLGPSENPLKR ddPTM_A459_MK2206_30min_R2 1 SPSLDNPTPFPNLGPSENPLKR 22 1 M0R0R8;M0R0X9;M0QXC8;M0QX56;M0R3C2;M0QYT9;M0R205;M0QZB8;M0QZB7;Q14653-3;Q14653-2;Q14653;Q14653-4 M0R0R8 IRF3 Interferon regulatory factor 3 1 S(0.741)PS(0.254)LDNPT(0.005)PFPNLGPSENPLKR 68.587 0.002638 20286000 61646 79985 74207 70258 77730 52659 68188 55266 56705 63292 TRUE FALSE 66365.66516 76013.06121 76681.02434 64517.69666 74677.92964 54662.97514 59234.83369 62489.45596 61637.0984 61226.78722 1.083931857 1.24150008 1.252409735 1.053749504 1.219693749 0.892795092 0.96746598 1.020622815 1.006701498 1 15.90187536 -6.754550406 24.99996216 0.978177805 1.172306355 0.669609883 0.067684607 98.61683441 357878.415 0.02281381 0.022335398 1.76E-07 6.754550406 0.19412855 S(ph)PSLESLSRPPSLGFGDTR ddPTM_A459_MK2206_30min_R2 1 SPSLESLSRPPSLGFGDTR 19 1 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 S(0.495)PS(0.495)LES(0.009)LSRPPSLGFGDTR 50.858 0.045488 2669300 9009.1 7880.7 9860.4 10303 8124.4 9536.5 10849 8046.3 7851.9 8361.5 TRUE FALSE 9698.843623 7489.355898 10189.14081 9461.211942 7805.395234 9899.41819 9424.513268 9097.979037 8534.844069 8088.66494 1.199066063 0.925907545 1.259681405 1.169687707 0.964979424 1.223863056 1.165150657 1.124781296 1.055161035 1 12.98168589 -8.456269628 2.789384401 1.001140827 1.127104732 0.149278692 0.101096544 0.484034325 7.994623475 0.094348428 0.025455103 3.50E-09 8.456269628 0.125963905 S(ph)PSLGSDLTFATR ddPTM_A459_MK2206_30min_R1 3 SPSLGSDLTFATR 13 0 Q13425 Q13425 SNTB2 Beta-2-syntrophin 1 S(0.986)PS(0.014)LGSDLTFATR;S(0.968)PS(0.031)LGSDLTFATR;S(0.875)PS(0.019)LGS(0.019)DLT(0.082)FAT(0.004)R 126.09 0.0020632 145699500 4984.02 5610.96 5219.88 4018.11 4329.89 4054.98 4410.94 4813.58 5169.27 4569.63 TRUE FALSE 4560.102927 5245.685484 4865.569089 4327.585528 4157.421313 4284.569463 4116.694241 4771.495378 5706.634115 5135.750263 0.887913682 1.021405874 0.947392073 0.842639402 0.809506128 0.834263592 0.801576017 0.92907465 1.111158803 1 12.32635933 -8.09177403 5.179089631 1.051523738 0.879346076 0.518190705 0.067524065 0.202904086 8.582851368 0.053466504 0.019533531 8.10E-09 8.09177403 -0.172177662 S(ph)PSLGSDLTFATR ddPTM_A459_MK2206_30min_R2 4 SPSLGSDLTFATR 13 0 Q13425 Q13425 SNTB2 Beta-2-syntrophin 1 S(0.999)PS(0.001)LGSDLTFATR;S(1)PSLGSDLTFATR;S(0.999)PS(0.001)LGSDLTFATR;S(0.895)PS(0.103)LGS(0.002)DLTFATR 214.48 1.88E-06 147012000 761173.3 698276.4 653050 754148.8 664652 482308.3 681863.5 524612.4 499911.3 646611 TRUE FALSE 819449.3131 663601.0094 674822.3611 692532.4306 638554.4229 500662.8803 592334.0034 593181.0419 543392.6812 625512.136 1.310045427 1.060892301 1.078831764 1.107144675 1.020850574 0.800404743 0.946958451 0.948312603 0.868716448 1 19.25467835 -2.121953339 0.396243736 0.910039338 4.466349668 0.688775987 0.074534834 26.34946761 0.559449574 0.057122213 68.07558715 0.007551734 2.121953339 3.55631033 S(ph)PSLLQSGAK ddPTM_A459_MK2206_30min_R2 2 SPSLLQSGAK 10 0 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(0.986)PS(0.012)LLQS(0.002)GAK;S(0.965)PS(0.035)LLQSGAK 101.72 0.016057 56428000 242250 206810 172545 190679 168867 168948 214200 135881 107409 236390 TRUE FALSE 260796.8463 196540.1161 178297.5642 175099.9157 162236.4331 175377.4345 186075.2827 153641.1132 116751.2407 228676.6137 1.140461379 0.859467494 0.77969304 0.765709763 0.709457913 0.76692335 0.813704907 0.671870686 0.51055173 1 17.80294931 S(ph)PSMAVPSPGWVASPK ddPTM_A459_MK2206_30min_R2 2 SPSMAVPSPGWVASPK 16 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 S(0.982)PS(0.018)MAVPSPGWVASPK;S(0.995)PS(0.005)MAVPSPGWVASPK 209.89 5.06E-08 13526700 31182 32977 27677 31268 30838 29601 27636 24360 23007 32141 TRUE FALSE 33569.31789 31339.41013 28599.73737 28713.30438 29627.14517 30727.4868 24007.36 27543.93564 25008.10727 31092.2418 1.079668623 1.007949518 0.919835165 0.923487749 0.952879029 0.988268617 0.772133452 0.885878085 0.80431985 1 14.92426702 -1.522878756 0.437322223 0.878585366 5.174957199 0.421536019 0.068021698 78.31564943 0.969656007 0.044181646 297.9566616 0.029999999 1.522878756 4.296371833 S(ph)PSMIS(ph)NDS(ph)ETLEECMVCSDMK ddPTM_A459_MK2206_30min_R2 1 SPSMISNDSETLEECMVCSDMK 22 0 Q86YT6 Q86YT6 MIB1 E3 ubiquitin-protein ligase MIB1 3 S(0.889)PS(0.27)MIS(0.844)NDS(0.544)ET(0.449)LEECMVCS(0.003)DMK 52.298 0.042216 0 7553.8 9160.5 10840 8639.5 9936.4 7025.1 11319 8315.3 7725.3 9348.9 TRUE FALSE 8132.124736 8705.602891 11201.40019 7933.625214 9546.24701 7292.445103 9832.801703 9402.138261 8397.23263 9043.846159 0.899188751 0.962599622 1.238565981 0.877240178 1.05555168 0.806343338 1.087236728 1.039617227 0.928502374 1 13.14272074 -1.524101585 6.491985882 0.993102565 0.000574169 0 0.117239554 0 0 0.025882883 0 0.029915648 1.524101585 -0.992528397 S(ph)PSMPCSVIRPILK ddPTM_A459_MK2206_30min_R1 2 SPSMPCSVIRPILK 14 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(0.713)PS(0.287)MPCSVIRPILK;S(0.718)PS(0.282)MPCSVIRPILK 103.77 0.0036605 76841000 5166.1 6090.6 5998.4 5844.9 6479.2 6127 6859.5 5878.7 5310.7 4824.3 TRUE FALSE 4726.696067 5694.100833 5591.24532 6295.075211 6221.119744 6473.905445 6401.915271 5827.303146 5862.76627 5421.970706 0.871767172 1.050190261 1.031220127 1.161030841 1.147390881 1.194013357 1.180735865 1.074757401 1.081298035 1 12.4046016 -4.325964474 1.043160515 1.126499028 0.475768081 0.590482643 0.05979432 2.801177614 1.297646483 0.019209257 2.547241619 4.72E-05 4.325964474 -0.650730947 S(ph)PSMPCSVIRPILK ddPTM_A459_MK2206_30min_R2 2 SPSMPCSVIRPILK 14 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(0.635)PS(0.365)MPCSVIRPILK;S(0.915)PS(0.085)MPCSVIRPILK 75.998 0.02372 62423000 66324 89622 87261 87523 88642 83382 90539 74114 84871 101121 TRUE FALSE 71401.81643 85171.5018 90170.23819 80372.09093 85161.46969 86555.16044 78651.12054 83800.95427 92252.92617 97821.43005 0.729919982 0.870683466 0.921784093 0.821620486 0.870580911 0.884828206 0.804027507 0.856672758 0.943074806 1 16.57786294 -14.52287874 0.141220855 1.513287136 0.805254723 0.475820479 0.052024577 134.520862 1.155434074 19.25230342 0.319718128 3.00E-15 14.52287874 -0.708032414 S(ph)PSPAHIVSNK ddPTM_A459_MK2206_30min_R2 1 SPSPAHIVSNK 11 0 Q9NQB0;Q5VVR7;E2GH26;C6ZRJ7;A0A0D9SGH8;C6ZRK5;Q9NQB0-13;Q9NQB0-3;Q9NQB0-7;Q9NQB0-5;Q9NQB0-8;Q9NQB0-16;Q9NQB0-2;Q9NQB0-14;Q9NQB0-6;Q9NQB0-4;Q9NQB0-9;Q9NQB0-12;Q9NQB0-10;Q9NQB0-15 Q9NQB0 TCF7L2 Transcription factor 7-like 2 1 S(0.925)PS(0.075)PAHIVSNK 95.775 0.020968 0 14679 15443 14135 14401 11463 11857 15299 12316 8386.7 13156 TRUE FALSE 15802.83553 14676.12308 14606.25385 13224.39223 11012.90502 12308.22644 13290.22292 13925.74349 9116.160006 12726.7208 1.24170521 1.153173964 1.147684001 1.039104451 0.865337207 0.967116875 1.044277087 1.094213011 0.716300778 1 13.63557312 -5.814279056 2.544571872 0.957700323 1.188710309 0.520447765 0.100000314 0.236020633 3.112038737 0.029742419 0.051841322 1.53E-06 5.814279056 0.231009986 S(ph)PSPAHLPDDPK ddPTM_A459_MK2206_30min_R1 2 SPSPAHLPDDPK 12 0 Q92615;H0Y4V9;A0A087X183;H0Y641 Q92615 LARP4B La-related protein 4B 1 S(0.928)PS(0.072)PAHLPDDPK;S(0.69)PS(0.31)PAHLPDDPK 193.49 0.00015596 173314000 12790.8 13954.1 13212.2 10936.1 10930.1 10088.6 11585.8 11057.5 11673.9 10398.4 TRUE FALSE 11702.87529 13045.68555 12315.39268 11778.40032 10494.73097 10659.80781 10812.93242 10960.82544 12887.44368 11686.6323 1.001389878 1.116291265 1.053801674 1.007852392 0.898011566 0.912136837 0.92523938 0.937894268 1.102750849 1 13.51257163 -5.939920137 3.606888187 0.954831368 1.062611408 0.319064066 0.060867508 0.248451713 6.602878822 0.018150505 0.027566184 1.15E-06 5.939920137 0.10778004 S(ph)PSPAHLPDDPK ddPTM_A459_MK2206_30min_R2 2 SPSPAHLPDDPK 12 0 Q92615;H0Y4V9;A0A087X183;H0Y641 Q92615 LARP4B La-related protein 4B 1 S(0.5)PS(0.5)PAHLPDDPK;S(0.554)PS(0.446)PAHLPDDPK 165.58 0.00050532 284630000 620940 698060 710120 738720 717160 565161 778920 630660 558084 738630 TRUE FALSE 668479.6438 663395.3555 733795.0464 678364.213 689000.695 586668.5979 676646.8683 713089.4274 606625.1375 714528.5636 0.935553423 0.928437839 1.026963908 0.949387117 0.964273131 0.821056887 0.946983652 0.997985894 0.848986546 1 19.44663216 S(ph)PSPALHPPQK ddPTM_A459_MK2206_30min_R1 1 SPSPALHPPQK 11 0 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 S(0.991)PS(0.009)PALHPPQK 70.438 0.043834 8820500 2887.2 2351.8 3124.4 2123.2 3231.8 2555.6 2490.1 2370.5 2174.7 3025.5 TRUE FALSE 2641.628479 2198.697393 2912.324433 2286.729232 3103.070563 2700.295863 2323.989972 2349.774968 2400.767847 3400.321781 0.776876028 0.646614507 0.856484951 0.672503774 0.912581444 0.794129508 0.683461779 0.691044883 0.706041369 1 11.73145556 -11.86620908 2.268630888 2.506985643 0.749295164 0.458784789 0.081829788 4172213.169 409014.3271 32461262.03 0.020727751 1.36E-12 11.86620908 -1.75769048 S(ph)PSPALHPPQK ddPTM_A459_MK2206_30min_R2 1 SPSPALHPPQK 11 0 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 S(0.998)PS(0.002)PALHPPQK 81.278 0.027908 10969000 49384 41358 39059 38196 41431 44423 48795 27864 37124 45740 TRUE FALSE 53164.87701 39304.22186 40361.20757 35075.26462 39804.21077 46113.54839 42388.15789 31505.92047 40352.97842 44247.50755 1.201533825 0.888281036 0.912169065 0.792705998 0.899580857 1.04217279 0.957978432 0.712038309 0.911983085 1 15.43330857 -4.76057791 24.98980506 0.895855424 1.201534183 0.497980232 0.090077833 18.30090342 530573.9231 0.023169973 0.13603803 1.74E-05 4.76057791 0.305678759 S(ph)PSPAPPPR ddPTM_A459_MK2206_30min_R2 1 SPSPAPPPR 9 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.932)PS(0.068)PAPPPR 112.71 0.0095357 2601100 5479.1 5878.1 6099.6 7577.1 6818.6 5467.6 6322.3 5495.2 5245.2 5517.1 TRUE FALSE 5898.584109 5586.202102 6302.95762 6958.026692 6550.867503 5675.673349 5492.174416 6213.441508 5701.418015 5337.077479 1.105208634 1.046678097 1.180975477 1.303714761 1.22742597 1.063442188 1.029060275 1.16420298 1.068265926 1 12.38183424 -6.77799782 24.84352963 1.073011055 1.173520954 0.337655488 0.075073147 327.6351494 491565.5988 0.029545174 0.026132683 1.67E-07 6.77799782 0.100509899 S(ph)PSPASGR ddPTM_A459_MK2206_30min_R2 2 SPSPASGR 8 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.999)PS(0.001)PASGR;S(0.997)PS(0.003)PASGR 92.239 0.025743 6712000 16703.2 6794.2 9891.8 12667.4 18429.2 12735.8 15982.5 57137 29282 24368 TRUE FALSE 17982.00983 6456.809908 10221.58767 11632.4329 17705.57701 13220.46979 13883.97855 64605.00208 31828.89543 23572.87416 0.762826362 0.273908471 0.433616521 0.49346689 0.751099628 0.560834021 0.588981151 2.740650192 1.350233969 1 14.52484005 -7.664505035 10.43885598 1.782485029 0.53944883 0.590101938 0.435548194 0.20206542 20.01682142 0.190670339 0.109923028 2.17E-08 7.664505035 -1.243036199 S(ph)PSPAVPLR ddPTM_A459_MK2206_30min_R1 2 SPSPAVPLR 9 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 S(0.998)PS(0.002)PAVPLR;S(0.712)PS(0.288)PAVPLR 131.52 0.0035843 31466000 5096.5 5212.1 5242.4 4410.9 5949 5716.1 5610 4721.5 4878.3 4421.9 TRUE FALSE 4663.015912 4872.791343 4886.560494 4750.628282 5712.038733 6039.740642 5235.767136 4680.220423 5385.416742 4969.718356 0.93828575 0.980496478 0.983267088 0.955914992 1.149368701 1.215308436 1.053533975 0.941747618 1.083646267 1 12.27894838 -6.239245335 24.55220162 1.077070253 0.966975447 0.36171115 0.071119459 807.950566 893796.3539 0.023260807 0.03000271 5.76E-07 6.239245335 -0.110094806 S(ph)PSPAVPLR ddPTM_A459_MK2206_30min_R2 2 SPSPAVPLR 9 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 S(0.503)PS(0.497)PAVPLR;S(0.983)PS(0.017)PAVPLR 107.79 0.012386 34862000 97320 95873 87728 106074 113544 91460 125073 92350 87502 96818 TRUE FALSE 104770.894 91112.08623 90652.80773 97407.41489 109085.692 94940.57439 108650.7649 104420.4621 95112.76579 93658.83659 1.118643983 0.972808221 0.967904482 1.040023755 1.164713294 1.013685177 1.160069555 1.114902404 1.015523674 1 16.5151275 -6.009595112 24.80586686 1.086367115 1.013233869 0.127912521 0.067041368 666.4363798 1722922.827 0.018656325 0.026003631 9.78E-07 6.009595112 -0.073133246 S(ph)PSPEPIYNSEGK ddPTM_A459_MK2206_30min_R1 1 SPSPEPIYNSEGK 13 0 Q15637-6;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-6;Q15637-5 SF1 Splicing factor 1 1 S(0.691)PS(0.309)PEPIYNSEGK 145.6 0.00062279 35109000 3008 3464.3 3237.1 2682.9 2454.5 2953.2 3800 2670.5 3610.3 4129.9 TRUE FALSE 2752.153804 3238.77344 3017.374671 2889.537423 2356.732068 3120.407632 3546.508933 2647.1521 3985.603605 4641.543191 0.592939393 0.697779447 0.650080059 0.622538088 0.507747525 0.672278056 0.764079701 0.57031724 0.85868071 1 12.18038883 -8.461783653 3.653601592 0.998432731 0.638761787 0.763736101 0.067594856 0.097993763 2.662525424 0.066640064 0.017578378 3.45E-09 8.461783653 -0.359670944 S(ph)PSPEPIYNSEGK ddPTM_A459_MK2206_30min_R2 1 SPSPEPIYNSEGK 13 0 Q15637-6;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-6;Q15637-5 SF1 Splicing factor 1 1 S(0.577)PS(0.423)PEPIYNSEGK 187.63 0.00014234 35016000 51738 47418 61817 50311 42183 33972 59079 43464 42426 53027 TRUE FALSE 55699.10106 45063.29107 63877.94793 46200.43036 40526.68347 35264.82827 51321.85633 49144.89403 46116.13679 51296.73333 1.0858216 0.878482666 1.245263466 0.900650536 0.790044138 0.687467329 1.000489758 0.958051144 0.899007282 1 15.64657933 -5.96579129 24.99178369 0.879176353 1.054425165 0.307364493 0.122060416 231.6499375 169234.5834 0.035047855 0.051984131 1.08E-06 5.96579129 0.175248811 S(ph)PSPFTHTHLAQGYR ddPTM_A459_MK2206_30min_R1 1 SPSPFTHTHLAQGYR 15 0 P38398-8;P38398-4;P38398;P38398-7;Q5YLB2 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 S(0.824)PS(0.176)PFTHTHLAQGYR 103.77 0.0035974 5415000 1752.4 1503 1535.3 1921 1674.4 2107.3 1795.7 1416.1 1224.3 1081.7 TRUE FALSE 1603.349178 1405.154427 1431.088114 2068.955753 1607.705102 2226.613505 1675.912129 1403.719187 1351.570366 1215.709162 1.318859171 1.155831074 1.177163221 1.701850917 1.322442203 1.831534691 1.378546927 1.154650496 1.111754693 1 10.24758241 -7.814529056 3.607083684 1.080179412 1.418893348 0.357759713 0.201332865 0.288917033 7.576215236 0.128027109 0.058655183 1.53E-08 7.814529056 0.338713936 S(ph)PSPGLFR ddPTM_A459_MK2206_30min_R1 3 SPSPGLFR 8 0 E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4 E7ESG2 CLSPN Claspin 1 S(0.987)PS(0.013)PGLFR;S(0.668)PS(0.332)PGLFR;S(0.834)PS(0.166)PGLFR 96.034 0.021405 46644100 12606.8 12852.5 13730.4 11560.9 14005.7 12588.6 14446.9 13315.9 11896 10625.7 TRUE FALSE 11534.52546 12015.79991 12798.4187 12451.32252 13447.82331 13301.35565 13483.17366 13199.48049 13132.63177 11942.09194 0.965871434 1.006172116 1.071706596 1.042641657 1.126086065 1.11382124 1.129046212 1.105290477 1.099692737 1 13.54376796 -5.081222284 0.986009519 1.101068758 0.929922423 0.546532147 0.037547872 0.88188413 0.950358811 0.012422466 0.144550481 8.29E-06 5.081222284 -0.171146335 S(ph)PSPGLFR ddPTM_A459_MK2206_30min_R2 2 SPSPGLFR 8 0 E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4 E7ESG2 CLSPN Claspin 1 S(0.762)PS(0.238)PGLFR;S(0.917)PS(0.083)PGLFR 114.89 0.01011 46681000 140408 219580 214990 234420 208197 261590 205801 179261 216220 195731 TRUE FALSE 151157.7444 208675.9765 222157.6593 215267.1361 200022.1397 271544.9908 178779.0815 202691.0282 235026.4248 189344.3135 0.798322071 1.102097933 1.173299875 1.136908377 1.056393699 1.43413333 0.944200954 1.070489123 1.241264765 1 17.53065257 -4.763504369 4.291394384 1.13635084 0.767074806 0.371519134 0.12934796 0.229743487 8.709309253 0.031341166 0.266073761 1.72E-05 4.763504369 -0.369276034 S(ph)PSPGNSPSGR ddPTM_A459_MK2206_30min_R2 1 SPSPGNSPSGR 11 0 Q13233 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 1 S(0.999)PS(0.001)PGNSPSGR 98.156 0.017649 0 703.48 854.71 650.66 981.37 2133.3 1188.1 1156.2 797.7 828.38 2917.7 TRUE FALSE 757.3389697 812.2663443 672.3526797 901.1889318 2049.535923 1233.313978 1004.389551 901.9621289 900.430995 2822.495688 0.268322454 0.287783024 0.238212119 0.319287975 0.726143155 0.436958676 0.35585158 0.319561916 0.31901944 1 11.46275566 -11.37404624 2.556768469 1.263311867 0.367565275 0.677556132 0.131707653 24159733.1 14827450.39 38789833.46 0.03843584 4.23E-12 11.37404624 -0.895746592 S(ph)PSPGPNHTSNSSNASNATVVPQNSSAR ddPTM_A459_MK2206_30min_R1 1 SPSPGPNHTSNSSNASNATVVPQNSSAR 28 0 Q9BTA9-5;Q9BTA9;A0A0A0MRT2;Q9BTA9-2 Q9BTA9-5 WAC WW domain-containing adapter protein with coiled-coil 1 S(0.927)PS(0.069)PGPNHT(0.004)SNSSNASNATVVPQNSSAR 124.96 2.48E-12 2372300 224.86 241.7 120.24 128.99 0 197.38 165.26 123.65 0 72.095 TRUE FALSE 205.7344762 225.9652861 112.0784438 138.9248322 0 208.555485 154.2358069 122.5689411 0 81.02667289 2.539095694 2.78877656 1.383229001 1.71455679 0 2.573911498 1.903518945 1.51269868 0 1 6.340324997 -5.267656433 19.64275238 1.3203 2.66393712 0.352690663 0.756851941 27.23846643 86070.63105 0.199026035 0.436399907 5.40E-06 5.267656433 1.34363712 S(ph)PSPLGTSVR ddPTM_A459_MK2206_30min_R2 1 SPSPLGTSVR 10 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 S(0.5)PS(0.497)PLGT(0.003)SVR 107.11 0.011488 15226000 40176 65846 63782 79496 79316 99426 70345 58036 78860 68683 TRUE FALSE 43251.90545 62576.18339 65908.46005 73000.9225 76201.65531 103209.7261 61108.617 65621.50447 85719.10025 66441.87933 0.650973541 0.941818383 0.991971641 1.098718508 1.146891931 1.553383606 0.919730411 0.987652744 1.290136599 1 16.01980526 -4.60079868 0.977447356 1.150521639 0.259586512 0.435858087 0.17124471 2.634081257 1.592802722 0.058577539 2.692300393 2.51E-05 4.60079868 -0.890935128 S(ph)PSPLTGK ddPTM_A459_MK2206_30min_R2 2 SPSPLTGK 8 0 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 S(0.569)PS(0.375)PLT(0.056)GK;S(0.726)PS(0.274)PLTGK 104.01 0.014949 30971000 279110 324020 312530 326940 337500 280200 362280 256990 300230 364860 TRUE FALSE 300478.8762 307929.638 322949.5942 300227.9562 324248.0542 290863.2073 314712.2008 290579.4754 326343.4627 352954.6481 0.851324321 0.872434007 0.914988926 0.850613408 0.918667755 0.824080966 0.891650535 0.823277089 0.924604519 1 18.42912329 -8.544385281 6.693704311 0.999992434 0.870563452 0.630733467 0.031469606 0.116695741 30.13583003 0.028283126 0.007320786 2.86E-09 8.544385281 -0.129428983 S(ph)PSPLVSLQAVK ddPTM_A459_MK2206_30min_R1 2 SPSPLVSLQAVK 12 0 Q9UPZ3;Q9UPZ3-2 Q9UPZ3 HPS5 Hermansky-Pudlak syndrome 5 protein 1 S(0.521)PS(0.479)PLVSLQAVK;S(1)PSPLVSLQAVK 177.36 0.00010365 107896000 5544.9 5401.8 6630.7 5183.7 6658.9 5584.5 6721.4 6272.4 5036.6 5254.9 TRUE FALSE 5073.277138 5050.141838 6180.626558 5582.949472 6393.661913 5900.689564 6273.02767 6217.561068 5560.172594 5905.916684 0.859016036 0.855098727 1.04651435 0.945314635 1.082585863 0.999114935 1.062159865 1.052768165 0.941458014 1 12.52794529 -5.255884287 24.89508647 1.018988963 0.857057358 0.669220775 0.044731601 227.5558587 1019780.446 0.010979635 0.027400068 5.55E-06 5.255884287 -0.161931606 S(ph)PSPPDGSPAATPEIR ddPTM_A459_MK2206_30min_R1 3 SPSPPDGSPAATPEIR 16 0 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 S(0.703)PS(0.296)PPDGSPAATPEIR;S(0.808)PS(0.154)PPDGS(0.038)PAATPEIR;S(0.994)PS(0.006)PPDGSPAATPEIR 165.49 1.80E-05 10267700 1682.26 1617.46 1974.36 1556.2 2190.6 1926.84 2021.53 1689.25 1681.43 1328.69 TRUE FALSE 1539.174953 1512.16306 1840.345944 1676.058794 2103.343763 2035.936016 1886.677422 1674.481065 1856.220666 1493.298148 1.030721798 1.012633051 1.232403553 1.122387244 1.408522314 1.363382134 1.263429828 1.121330705 1.243034198 1 10.54428652 -5.263221554 23.7035733 1.233661517 1.021677391 0.321963155 0.113199294 78.0550617 1038203.984 0.029864395 0.067881107 5.45E-06 5.263221554 -0.211984126 S(ph)PSPPDGSPAATPEIR ddPTM_A459_MK2206_30min_R2 1 SPSPPDGSPAATPEIR 16 0 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 S(0.876)PS(0.124)PPDGSPAATPEIR 155.56 9.02E-05 12241000 12283 19304 10447 19003 13903 13824 19810 11003 12701 10432 TRUE FALSE 13223.39592 18345.39143 10795.29777 17450.39411 13357.09836 14350.08201 17208.9232 12441.12988 13805.71002 10091.60469 1.310336297 1.81788645 1.069730543 1.729199135 1.323585175 1.421982176 1.705271235 1.23281978 1.368039122 1 13.30086798 -8.718654429 1.080820457 1.003904476 1.474339686 0.276726682 0.223162575 0.968406518 2.248779103 0.197368599 0.062764437 1.91E-09 8.718654429 0.47043521 S(ph)PSPPLPTHIPPEPPR ddPTM_A459_MK2206_30min_R1 1 SPSPPLPTHIPPEPPR 16 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 S(0.5)PS(0.5)PPLPTHIPPEPPR 100.97 0.0037902 4833000 1327.7 1232.5 1568 1239.6 1986 1758.4 1791.6 1628.4 1059.5 815.42 TRUE FALSE 1214.772143 1152.264026 1461.568529 1335.074207 1906.893415 1857.959088 1672.085633 1614.16307 1169.638816 916.4403857 1.325533185 1.257325674 1.594832082 1.456804204 2.080761001 2.027364919 1.82454381 1.761339958 1.276284671 1 9.839897227 -6.02992655 23.71428527 1.730077197 1.403502669 0.111417906 0.320039793 616.8197444 488777.3551 0.094271616 0.121939431 9.33E-07 6.02992655 -0.326574528 S(ph)PSPPLPTHIPPEPPR ddPTM_A459_MK2206_30min_R2 1 SPSPPLPTHIPPEPPR 16 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 S(0.5)PS(0.5)PPLPTHIPPEPPR 80.541 0.032496 0 8066 7870.3 11156 12559 11464 10552 9798.2 6864.6 10760 7749 TRUE FALSE 8683.539162 7479.472346 11527.93547 11532.88953 11013.86576 10953.56375 8511.68457 7761.82679 11695.88535 7496.150765 1.158399749 0.997775069 1.537847334 1.538508214 1.46926951 1.461225114 1.135474037 1.03544166 1.56025215 1 12.87193425 -7.270606572 24.76417829 1.185745427 1.365112506 0.141857637 0.213899922 1322.481969 3572527.167 0.094015046 0.064403382 5.36E-08 7.270606572 0.179367078 S(ph)PSPPLPTHIPPEPPRT(ph)PPFPAK ddPTM_A459_MK2206_30min_R1 2 SPSPPLPTHIPPEPPRTPPFPAK 23 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 2 S(0.699)PS(0.297)PPLPT(0.005)HIPPEPPRT(1)PPFPAK;S(0.334)PS(0.334)PPLPT(0.334)HIPPEPPRT(0.998)PPFPAK 111 2.21E-05 19334400 12864.2 12863.2 12533.7 11119.1 13412.2 12423.9 12962 13005 11506.2 10559.1 TRUE FALSE 11770.03224 12025.80334 11682.94736 11975.49501 12877.96367 13127.33048 12097.32863 12891.29866 12702.31067 11867.24103 0.991808645 1.013361346 0.984470387 1.009122085 1.085169135 1.106182174 1.019388467 1.086292815 1.070367631 1 13.53469695 -6.163088573 5.382828009 1.06555576 0.998275443 0.489961869 0.030688436 0.181447095 7.956686085 0.008841002 0.011507688 6.87E-07 6.163088573 -0.067280317 S(ph)PSPPLPTHIPPEPPRT(ph)PPFPAK ddPTM_A459_MK2206_30min_R2 1 SPSPPLPTHIPPEPPRTPPFPAK 23 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 2 S(0.6)PS(0.293)PPLPT(0.195)HIPPEPPRT(0.912)PPFPAK 56.573 0.025565 1590400 7386.9 6994.5 7313.1 9676.2 9074.2 8174.7 11070 8133 7694.4 7730.9 TRUE FALSE 7952.446744 6647.163301 7556.915104 8885.623507 8717.901314 8485.793937 9616.495703 9196.011025 8363.645004 7478.641366 1.063354472 0.888819637 1.010466305 1.188133388 1.165706562 1.134670527 1.285861326 1.229636584 1.118337489 1 12.86856049 -5.694698414 4.649790886 1.174528367 0.971022124 0.480571291 0.081605482 0.150396721 6.2661502 0.021788366 0.038128522 2.02E-06 5.694698414 -0.203506242 S(ph)PSPSFR ddPTM_A459_MK2206_30min_R1 1 SPSPSFR 7 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 S(0.998)PS(0.002)PSFR 98.582 0.021764 70183000 1197.8 957.59 889.17 893.09 963.09 1212.2 1143 820.35 799.54 741.57 TRUE FALSE 1095.92082 895.250717 828.8156178 961.8759465 924.7280859 1280.833716 1066.752556 813.1777664 882.6550442 833.4412902 1.314934637 1.074161705 0.994449912 1.154101624 1.109529965 1.53680137 1.279937253 0.975686921 1.059048855 1 9.702936765 -7.768959433 24.94404543 1.013025869 1.202338232 0.284950247 0.143120264 261.9570423 868895.307 0.084166577 0.041685024 1.70E-08 7.768959433 0.189312364 S(ph)PSPSFR ddPTM_A459_MK2206_30min_R2 2 SPSPSFR 7 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 S(0.929)PS(0.069)PS(0.002)FR;S(0.985)PS(0.015)PSFR 104.44 0.017991 76235700 164108 286977 278525 411171 295550 327340 334425 284640 319946 303600 TRUE FALSE 176672.2347 272726.1395 287810.8845 377577.014 283945.222 339797.1531 290514.5958 321843.4253 347774.3248 293693.5569 0.601552981 0.92860784 0.979970033 1.285615585 0.966807801 1.156978576 0.989175925 1.095847756 1.184140124 1 18.16395209 -4.681300975 1.506811421 1.091808567 0.324904699 0.698692042 0.096837927 0.756774135 1.346273776 0.026198722 0.933010142 2.08E-05 4.681300975 -0.766903868 S(ph)PSPSPTPEAK ddPTM_A459_MK2206_30min_R1 1 SPSPSPTPEAK 11 0 Q8TAQ2;F8VXC8;Q8TAQ2-2;Q8TAQ2-3 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 1 S(0.757)PS(0.203)PS(0.039)PT(0.001)PEAK 102.05 0.014669 4690500 3201.7 3170.6 3173.7 2491.4 2912.9 2867.3 3158.8 2811.7 3262.5 2856 TRUE FALSE 2929.378602 2964.193364 2958.278086 2683.28806 2796.873025 3029.644048 2948.082216 2787.117603 3601.64855 3209.822842 0.912629371 0.92347569 0.921632823 0.83596142 0.871348097 0.943866437 0.918456364 0.868308857 1.122070821 1 11.64827796 -8.255047627 24.99997474 1.061035415 0.900059264 0.712898598 0.041013267 240.2365047 939642.9796 0.029032985 0.010393591 5.56E-09 8.255047627 -0.160976151 S(ph)PSPSPTPEAK ddPTM_A459_MK2206_30min_R2 1 SPSPSPTPEAK 11 0 Q8TAQ2;F8VXC8;Q8TAQ2-2;Q8TAQ2-3 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 1 S(0.556)PS(0.423)PS(0.02)PT(0.001)PEAK 105.36 0.01174 8056000 32154 28334 30712 32827 31290 28458 33119 25958 25312 33052 TRUE FALSE 34615.73496 26926.97476 31735.92275 30144.92909 30061.39738 29540.98913 28770.43552 29350.79973 27513.59201 31973.51595 1.082637737 0.842164959 0.992569063 0.942809328 0.9401968 0.923920572 0.899820826 0.91797223 0.860511933 1 14.96458978 -4.741480165 24.99861264 0.924287067 1.08263829 0.50091707 0.047371931 1193.358563 1494586.691 0.011201319 0.447443619 1.81E-05 4.741480165 0.158351223 S(ph)PSPSVR ddPTM_A459_MK2206_30min_R2 2 SPSPSVR 7 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(0.887)PS(0.075)PS(0.038)VR;S(0.952)PS(0.047)PS(0.001)VR 95.909 0.023486 151792000 49938 65086 56493 65896 65921 53100 57229 48119 59776 51139 TRUE FALSE 53761.29168 61853.92388 58376.44842 60512.08601 63332.61031 55120.75771 49714.76356 54408.31852 64975.20843 49470.33862 1.086737895 1.250323438 1.180029287 1.223199349 1.280213803 1.114218323 1.004940838 1.099816982 1.313417499 1 15.59427615 -6.881330521 9.080875971 1.105377011 1.206253997 0.214902357 0.093372417 0.439702703 32.97838614 0.032923306 0.029043681 1.31E-07 6.881330521 0.100876986 S(ph)PSPVLR ddPTM_A459_MK2206_30min_R1 2 SPSPVLR 7 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-2 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(0.645)PS(0.355)PVLR;S(0.936)PS(0.064)PVLR 104.06 0.018235 69810000 3288.1 3441.7 3330.7 3166.1 3772.8 3311.9 3915.7 2815 2712.6 2896 TRUE FALSE 3008.429828 3217.644704 3104.621364 3409.953571 3622.521387 3499.416916 3654.490798 2790.388752 2994.584477 3254.778344 0.924311738 0.988591039 0.953865682 1.047676127 1.112985587 1.075162898 1.122807888 0.85732067 0.920057884 1 11.66834358 -7.770843943 24.99999831 0.916516967 1.032864781 0.33353869 0.068548226 238.8944573 635038.6966 0.039852223 0.019541735 1.69E-08 7.770843943 0.116347814 S(ph)PSPVLR ddPTM_A459_MK2206_30min_R2 3 SPSPVLR 7 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-2 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(0.953)PS(0.047)PVLR;S(0.95)PS(0.05)PVLR;S(0.95)PS(0.05)PVLR 104.06 0.018235 137100600 62314.7 84049.4 65327.7 86081 69355 78481 81771 68317.2 76020 64118 TRUE FALSE 67085.56134 79875.62902 67505.69291 79047.90694 66631.77422 81467.64945 71034.36948 77246.49261 82632.08219 62025.83491 1.081574499 1.287779989 1.088347993 1.274435194 1.074258401 1.313447043 1.145238425 1.245392226 1.332220393 1 15.92058163 -6.762562226 24.99999197 1.218720285 1.17054176 0.032686845 0.111483234 112.7814828 2511037.212 0.035454997 0.033070658 1.73E-07 6.762562226 -0.048178525 S(ph)PSPVQGK ddPTM_A459_MK2206_30min_R2 2 SPSPVQGK 8 0 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 S(0.583)PS(0.417)PVQGK;S(0.638)PS(0.362)PVQGK 87.806 0.031954 66245000 334280 318090 293710 324180 366060 231055 346420 374130 347780 336450 TRUE FALSE 359872.7338 302294.1131 303502.1448 297693.457 351686.6451 239847.9599 300934.6379 423030.0756 378029.2758 325471.6641 1.105696051 0.928787807 0.932499441 0.914652456 1.080544588 0.736924244 0.924610868 1.299744716 1.161481375 1 18.31217242 -7.743442152 24.99349923 1.172959782 0.940944372 0.396638865 0.116427661 204.3319203 283764.9083 0.05381507 0.030989126 1.81E-08 7.743442152 -0.23201541 S(ph)PSPYYSR ddPTM_A459_MK2206_30min_R1 3 SPSPYYSR 8 0 Q13595;Q13595-4;Q13595-3;P62995;H7C2L4;P62995-3;H7BXF3 Q13595;P62995 TRA2A;TRA2B Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta 1 S(0.997)PS(0.003)PYYSR;S(1)PSPYYSR;S(0.999)PS(0.001)PYYSR 114.86 0.010127 69340000 2707.38 3118.3 2745.71 2393.03 2524.3 2457.95 2839.52 2236.27 2502.13 2336.28 TRUE FALSE 2477.103114 2915.298103 2559.338855 2577.341585 2423.751786 2597.117005 2650.100802 2216.718527 2762.235367 2625.716004 0.943401004 1.110286908 0.974720362 0.981576675 0.92308223 0.989108114 1.009286913 0.844233925 1.051993195 1 11.35849517 -5.489949078 24.76092385 0.966148114 1.030758896 0.100041378 0.064664776 1019.758254 766788.6465 0.015794639 0.032835521 3.24E-06 5.489949078 0.064610783 S(ph)PSPYYSR ddPTM_A459_MK2206_30min_R2 2 SPSPYYSR 8 0 Q13595;Q13595-4;Q13595-3;P62995;H7C2L4;P62995-3;H7BXF3 Q13595;P62995 TRA2A;TRA2B Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta 1 S(0.999)PS(0.001)PYYSR;S(0.998)PS(0.002)PYYSR 108.57 0.01282 97902000 46640 68244 37686 72782 48406 54118 66189 65339 50998 59045 TRUE FALSE 50210.79426 64855.1022 38942.43243 66835.47778 46505.33722 56177.49841 57498.30479 73879.03164 55433.71386 57118.36649 0.879065655 1.135450927 0.681784771 1.17012236 0.814192353 0.983527749 1.006651771 1.293437404 0.970505938 1 15.8016671 -7.533008667 24.94035051 1.10919194 0.94934004 0.14099107 0.156346788 349.094625 859475.2865 0.06789881 0.039255637 2.93E-08 7.533008667 -0.1598519 S(ph)PSQESIGAR ddPTM_A459_MK2206_30min_R1 1 SPSQESIGAR 10 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(0.996)PS(0.004)QESIGAR 98.368 0.019636 9701000 717.96 711 735.11 644.31 841.55 558.87 870.98 520.57 540.69 674.5 TRUE FALSE 656.8937318 664.7137708 685.2127813 693.9348678 808.0292815 590.5127364 812.8785134 516.0187114 596.8966604 758.0621522 0.86654337 0.876859198 0.90390053 0.915406297 1.065914291 0.778976677 1.07231117 0.680707657 0.78739805 1 9.566172327 -10.30548091 5.178347431 1.00000003 0.886415516 0.084550341 0.11492289 114689951.5 13.06803333 77.11357147 0.028440535 4.95E-11 10.30548091 -0.113584514 S(ph)PSQESIGAR ddPTM_A459_MK2206_30min_R2 3 SPSQESIGAR 10 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(1)PSQESIGAR;S(0.983)PS(0.017)QESIGAR;S(0.994)PS(0.006)QESIGAR 122.55 0.0044309 50436000 22539.3 20649.5 17032.6 40961.6 22654.5 28182 35420 25799.7 23709.4 16517.9 TRUE FALSE 24264.92614 19624.07586 17600.45838 37614.90625 21764.9705 29254.48576 30769.31145 29171.80937 25771.60076 15978.92228 1.518558368 1.228122618 1.101479692 2.354032744 1.362105036 1.830817201 1.925618695 1.825643111 1.612849747 1 13.96388249 -5.69405043 24.99996895 1.736594635 1.277259362 0.227232584 0.349777211 69.76358787 25879.57769 0.088620471 0.153495123 2.02E-06 5.69405043 -0.459335273 S(ph)PSQGSYSR ddPTM_A459_MK2206_30min_R2 1 SPSQGSYSR 9 0 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)PSQGSYSR 107.34 0.012643 29544000 16035 22637 15596 19213 22681 16956 20203 15349 20799 21207 TRUE FALSE 17262.65193 21512.8795 16115.96286 17643.23644 21790.42998 17601.27246 17550.32183 17355.167 22608.05942 20515.01733 0.841464165 1.048640572 0.785569059 0.860015673 1.062169709 0.857970148 0.855486571 0.845973792 1.102024876 1 14.32439275 -8.261682684 24.99999921 1.051012445 0.898057359 0.332746235 0.088458038 25.77482049 2647634.023 0.069080717 0.022119049 5.47E-09 8.261682684 -0.152955086 S(ph)PSSDSWTCADTSTER ddPTM_A459_MK2206_30min_R1 1 SPSSDSWTCADTSTER 16 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;H0YIQ0 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 S(0.961)PS(0.033)S(0.006)DSWTCADTSTER 97.223 0.0077378 20057000 501.38 466.16 461.7 444.56 491.58 392.16 386.59 347.24 432.25 299.7 TRUE FALSE 458.7349981 435.8128993 430.3610904 478.8000882 471.9993277 414.3637603 360.8012865 344.2041173 477.1839343 336.8290986 1.361922114 1.293869506 1.277683823 1.421492651 1.401302113 1.230189915 1.071170181 1.021895432 1.416694509 1 8.395872968 -6.982859711 4.603293151 1.130655724 1.346870719 0.459646308 0.114402251 0.184645858 9.924782623 0.041966558 0.035333164 1.04E-07 6.982859711 0.216214995 S(ph)PSSDSWTCADTSTER ddPTM_A459_MK2206_30min_R2 1 SPSSDSWTCADTSTER 16 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;H0YIQ0 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 S(0.827)PS(0.139)S(0.034)DSWTCADTSTER 97.2 0.0077499 34906000 26163 25425 40141 32518 21576 27124 28666 19918 32472 23367 TRUE FALSE 28166.0594 24162.43147 41479.28091 29861.17538 20728.81783 28156.22283 24902.11977 22521.35099 35296.35586 22604.5367 1.246035686 1.068919562 1.834998056 1.321025764 0.917020247 1.245600527 1.101642564 0.996319955 1.561472209 1 14.46432473 -6.017094106 24.87776537 1.138535235 1.389566896 0.178213194 0.245359055 1183.501188 1722399.965 0.071535097 0.094687643 9.61E-07 6.017094106 0.251031661 S(ph)PSSESSPQHPTPPARPR ddPTM_A459_MK2206_30min_R2 1 SPSSESSPQHPTPPARPR 18 1 O14733;O14733-4;O14733-3;O14733-2 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 1 S(0.672)PS(0.188)S(0.054)ES(0.046)S(0.037)PQHPT(0.002)PPARPR 86.258 0.0040283 2553800 915.92 932.8 924.65 1038.4 1192.4 2003.2 564.24 1215.5 3365 753.69 TRUE FALSE 986.0435394 886.4785084 955.4773695 953.5593983 1145.580385 2079.43318 490.1546102 1374.370023 3657.681617 729.097157 1.352417205 1.215857859 1.31049389 1.307863279 1.571231452 2.852065955 0.672276123 1.885030013 5.016727308 1 9.509967266 -8.020445605 24.7071361 3.155869009 1.487908328 0.252365034 1.03922812 773.5525718 934780.0068 0.631046779 0.245082886 9.54E-09 8.020445605 -1.66796068 S(ph)PSSEWLVR ddPTM_A459_MK2206_30min_R1 1 SPSSEWLVR 9 0 Q9NWQ4-4;Q9NWQ4 Q9NWQ4-4 GPATCH2L G patch domain-containing protein 2-like 1 S(0.981)PS(0.018)SEWLVR 119.22 0.0069649 6724600 592.83 645.11 625.13 456.39 617.96 407.52 464.97 534.37 598.23 406.15 TRUE FALSE 542.4066954 603.1132217 582.6979173 491.5412369 593.3453446 430.5934302 433.9526997 529.6980594 660.4181493 456.4669283 1.188271618 1.321263786 1.276539178 1.076838663 1.299864914 0.943317913 0.950677197 1.160430311 1.446803938 1 8.834366528 -5.75165703 24.81054622 1.124503715 1.267948806 0.147417605 0.150333476 366.7395004 930135.3269 0.042435589 0.072337578 1.77E-06 5.75165703 0.143445091 S(ph)PSSEWLVR ddPTM_A459_MK2206_30min_R2 3 SPSSEWLVR 9 0 Q9NWQ4-4;Q9NWQ4 Q9NWQ4-4 GPATCH2L G patch domain-containing protein 2-like 1 S(0.998)PS(0.001)SEWLVR;S(1)PSSEWLVR;S(0.997)PS(0.003)SEWLVR 145.99 0.0017932 15968600 12086.7 15702.8 9525.9 12927.8 11373.1 9348.3 12967.3 7049.5 9268 9203.8 TRUE FALSE 13012.06705 14923.02179 9843.488752 11871.55739 10926.53495 9704.056107 11264.67793 7970.893855 10074.11389 8903.48076 1.461458434 1.676088508 1.105577584 1.333361379 1.227220594 1.08991712 1.265199335 0.89525592 1.131480391 1 13.12015374 -3.695756778 0.294779385 0.993979345 2.564301129 0.594098992 0.138553916 9.865875116 0.424492407 0.146405113 6.266296401 0.000201485 3.695756778 1.570321784 S(ph)PSSKPSLAVAVDSAPEVAVK ddPTM_A459_MK2206_30min_R1 2 SPSSKPSLAVAVDSAPEVAVK 21 1 Q5SRN1;O60508 Q5SRN1 CDC40 Pre-mRNA-processing factor 17 1 S(0.918)PS(0.02)S(0.02)KPS(0.041)LAVAVDSAPEVAVK;S(0.677)PS(0.162)S(0.162)KPSLAVAVDSAPEVAVK 170.49 1.12E-10 57689000 7309.9 7382.8 6677.4 5187.6 6555.9 6526.2 8074.2 6330 7680.8 9681.1 TRUE FALSE 6688.154619 6902.178378 6224.156692 5587.149851 6294.764621 6895.707804 7535.58485 6274.657477 8479.246646 10880.46776 0.614693667 0.634364122 0.572048632 0.513502726 0.578538052 0.633769426 0.692579126 0.576690048 0.779309018 1 13.40945296 -8.793459214 0.862904107 1.003558261 0.590369246 0.864986365 0.048894012 0.355555897 0.512522273 0.050055069 0.017091502 1.61E-09 8.793459214 -0.413189015 S(ph)PSSKPSLAVAVDSAPEVAVK ddPTM_A459_MK2206_30min_R2 2 SPSSKPSLAVAVDSAPEVAVK 21 1 Q5SRN1;O60508 Q5SRN1 CDC40 Pre-mRNA-processing factor 17 1 S(0.851)PS(0.063)S(0.063)KPS(0.023)LAVAVDSAPEVAVK;S(0.706)PS(0.078)S(0.078)KPS(0.138)LAVAVDSAPEVAVK 90.316 0.00040973 53697000 277253 195571 212942 240879 191078 183125 256862 177619 154045 256247 TRUE FALSE 298479.7029 185859.2285 220041.38 221198.4152 183575.3176 190093.9502 223135.7109 200834.4132 167443.5557 247885.6814 1.204102235 0.749777992 0.887672813 0.892340429 0.740564427 0.766861358 0.900155707 0.810189649 0.675487002 1 17.91931541 -4.754921665 24.9995091 0.820841635 1.204102877 0.60738054 0.091442191 145.000156 556115.1179 0.021860394 0.203499818 1.76E-05 4.754921665 0.383261243 S(ph)PSSLLIANLHLQ ddPTM_A459_MK2206_30min_R1 2 SPSSLLIANLHLQ 13 0 Q658Y4 Q658Y4 FAM91A1 Protein FAM91A1 1 S(0.673)PS(0.275)S(0.052)LLIANLHLQ;S(0.964)PS(0.029)S(0.006)LLIANLHLQ 111.88 0.0051016 7688600 2571.9 2497 2478 2537.3 2813.1 2561.7 2671.8 2883.8 2321.3 2148.01 TRUE FALSE 2353.146399 2334.444846 2309.800264 2732.723286 2701.04827 2706.74124 2493.569097 2858.587241 2562.607442 2414.121695 0.974742244 0.966995513 0.956787004 1.131974122 1.118853401 1.121211596 1.032909443 1.184110663 1.06150715 1 11.23728269 -5.755651033 24.99986685 1.100366013 0.966256943 0.57078601 0.050084462 89.45742293 386361.3834 0.012870774 0.021539103 1.76E-06 5.755651033 -0.13410907 S(ph)PSSQTPNSR ddPTM_A459_MK2206_30min_R1 1 SPSSQTPNSR 10 0 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 S(0.996)PS(0.004)SQTPNSR 92.792 0.026128 1272100 631.59 602.91 508.09 743.23 509.36 358.79 658.16 622.77 184.58 328.85 TRUE FALSE 577.8699539 563.6604494 473.6022664 800.4737034 489.0711126 379.1043797 614.2553473 617.3251875 203.7677515 369.5904207 1.563541481 1.525094856 1.281424625 2.165839964 1.323278649 1.025741898 1.661989361 1.670295422 0.551333964 1 8.529783554 -8.257922491 24.99935118 0.775666948 1.521166281 0.500293665 0.300369364 237.1805509 1685998.866 0.224260234 0.077095731 5.52E-09 8.257922491 0.745499334 S(ph)PSSQTPNSR ddPTM_A459_MK2206_30min_R2 4 SPSSQTPNSR 10 0 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 S(1)PSSQTPNSR;S(1)PSSQTPNSR;S(0.998)PS(0.002)SQTPNSR;S(0.982)PS(0.017)SQTPNSR 131.12 0.0026642 93013000 22721.54 24259.98 21399.77 23555.6 21470 23560.9 27452.1 18745.3 23332.79 23890.05 TRUE FALSE 24461.11857 23055.26467 22113.22765 21631.03213 20626.97992 24457.52656 23847.60629 21195.37507 25362.2339 23110.51963 1.058440873 0.997609099 0.956846839 0.935982076 0.892536397 1.058285446 1.031893989 0.917131048 1.097432438 1 14.49626208 -6.789997094 24.99950134 1.016453332 0.967482312 0.164913781 0.058808979 454.4521466 397825.4587 0.021255834 0.018749136 1.62E-07 6.789997094 -0.04897102 S(ph)PSSVTGNALWK ddPTM_A459_MK2206_30min_R2 1 SPSSVTGNALWK 12 0 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 S(0.999)PS(0.001)SVTGNALWK 171.36 0.00026897 19812000 25472 28914 27029 27672 24943 25714 26185 22194 20967 29218 TRUE FALSE 27422.1559 27478.1728 27930.13337 25411.10908 23963.61249 26692.56429 22746.87805 25094.832 22790.67176 28264.61905 0.97019372 0.972175594 0.988165923 0.899043042 0.847830726 0.944380826 0.804782757 0.887853183 0.806332175 1 14.78670963 -5.858237207 4.435504129 0.875423595 0.976335513 0.36374717 0.055910518 0.205015727 7.119267118 0.014985257 0.023115104 1.39E-06 5.858237207 0.100911918 S(ph)PSTLLPK ddPTM_A459_MK2206_30min_R1 1 SPSTLLPK 8 0 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.989)PS(0.008)T(0.003)LLPK 104.42 0.014617 181130000 10017 9794.4 8918.9 7179.5 7500.2 7961.1 8809.5 6942.3 9052.1 8361 TRUE FALSE 9165.001549 9156.78278 8313.509917 7732.466334 7201.451152 8411.850602 8221.834329 6881.604203 9993.098188 9396.823802 0.975329722 0.97445509 0.884714888 0.822880847 0.766370776 0.895180199 0.874958869 0.732333004 1.063454886 1 13.19795748 -5.310305752 3.981796227 0.863426782 0.976770507 0.124952503 0.093882575 0.345973597 11.57074729 0.023786085 0.056984765 4.89E-06 5.310305752 0.113343725 S(ph)PSTLLPK ddPTM_A459_MK2206_30min_R2 3 SPSTLLPK 8 0 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.995)PS(0.004)T(0.001)LLPK;S(0.997)PS(0.003)TLLPK;S(0.998)PS(0.002)TLLPK 106.88 0.013539 339866000 237391 223084 207860 229885 209674 172612 266734 199668 151893 232292 TRUE FALSE 255565.8375 212005.973 214789.9487 211102.6601 201441.1452 179180.8706 231711.5054 225765.2932 165104.3786 224712.3311 1.13730224 0.943455003 0.955844068 0.93943514 0.896440103 0.797378897 1.031147264 1.004685823 0.73473662 1 17.77771977 S(ph)PSTTYLHTPTPSEDAAIPSK ddPTM_A459_MK2206_30min_R1 3 SPSTTYLHTPTPSEDAAIPSK 21 0 Q13111 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 S(0.728)PS(0.19)T(0.041)T(0.041)YLHTPTPSEDAAIPSK;S(0.641)PS(0.159)T(0.159)T(0.04)Y(0.001)LHT(0.001)PTPSEDAAIPSK;S(0.652)PS(0.092)T(0.092)T(0.092)Y(0.069)LHT(0.003)PTPSEDAAIPSK 124.66 4.70E-05 144725000 20724.7 17839.4 18618.5 15164.3 18937.3 19521.2 20911.2 18003.2 17320.1 16181 TRUE FALSE 18961.95544 16678.05182 17354.72809 16332.25701 18182.98724 20626.47347 19516.252 17845.79992 19120.58638 18185.62444 1.042689268 0.91710086 0.954310266 0.898086127 0.999854984 1.134218599 1.073169198 0.981313563 1.051412144 1 14.15051084 -6.523279085 24.99971705 1.050494276 0.950369482 0.423598687 0.052191209 13.1782721 822860.0283 0.01728108 0.017442433 3.00E-07 6.523279085 -0.100124794 S(ph)PSTTYLHTPTPSEDAAIPSK ddPTM_A459_MK2206_30min_R2 4 SPSTTYLHTPTPSEDAAIPSK 21 0 Q13111 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 S(0.35)PS(0.166)T(0.166)T(0.166)Y(0.147)LHT(0.004)PTPSEDAAIPSK;S(0.452)PS(0.17)T(0.17)T(0.17)Y(0.032)LHT(0.005)PTPSEDAAIPSK;S(0.542)PS(0.146)T(0.146)T(0.146)Y(0.02)LHT(0.001)PTPSEDAAIPSK;S(0.869)PS(0.043)T(0.043)T(0.043)Y(0.002)LHTPTPSEDAAIPSK 123.74 4.74E-05 259087000 229208 262588 269519 285625 269946 269654 298439 231679 230243 268926 TRUE FALSE 246756.3407 249548.2618 278504.6289 262288.5238 259346.5637 279915.8719 259253.6008 261960.2408 250269.12 260150.9666 0.948512104 0.95924403 1.070550045 1.008216603 0.996907938 1.075974752 0.996550596 1.006954708 0.962014953 1 17.98898954 -5.077026686 10.9510183 1.015570932 0.951179146 0.358993321 0.032600051 0.635052645 88.40249471 0.008267484 0.021935717 8.37E-06 5.077026686 -0.064391786 S(ph)PSVAAMASPQLCR ddPTM_A459_MK2206_30min_R1 2 SPSVAAMASPQLCR 14 0 P25325-2 P25325-2 MPST 3-mercaptopyruvate sulfurtransferase 1 S(1)PSVAAMASPQLCR;S(0.999)PS(0.001)VAAMASPQLCR 177.93 7.09E-05 29231000 326.21 382.48 354.48 435.99 365.5 324.26 261.87 356.01 189.958 428.53 TRUE FALSE 298.4641265 357.5804825 330.4188852 469.5700253 350.941361 342.619321 244.4011301 352.8974421 209.7048139 481.6195316 0.619709349 0.74245428 0.686057902 0.974981276 0.728669288 0.711390005 0.507456849 0.732730753 0.435415925 1 8.91175009 -7.011428583 18.01288923 0.641313704 0.754959598 0.041277806 0.164201603 33.99837996 53585.53687 0.05752109 0.047302201 9.74E-08 7.011428583 0.113645894 S(ph)PSVAAMASPQLCR ddPTM_A459_MK2206_30min_R2 4 SPSVAAMASPQLCR 14 0 P25325-2 P25325-2 MPST 3-mercaptopyruvate sulfurtransferase 1 S(1)PSVAAMASPQLCR;S(1)PSVAAMASPQLCR;S(0.923)PS(0.05)VAAMAS(0.027)PQLCR;S(0.705)PS(0.295)VAAMASPQLCR 199.33 8.32E-05 90841600 41117 37105.7 33620.4 45961 36027.8 45684.1 46508.5 43354.5 26266.4 57087.7 TRUE FALSE 44264.94913 35263.08489 34741.28736 42205.83928 34613.16755 47422.64044 40401.87808 49021.08201 28551.00399 55224.93302 0.801539209 0.638535585 0.629086998 0.764253336 0.626767035 0.858717935 0.731587634 0.887662136 0.516994814 1 15.75303214 -6.758549421 24.99841726 0.78775858 0.689579028 0.144913163 0.1283947 162.2643324 1403603.769 0.040680122 0.038978557 1.74E-07 6.758549421 -0.098179551 S(ph)PSWQRPNQGVPSTGR ddPTM_A459_MK2206_30min_R1 1 SPSWQRPNQGVPSTGR 16 1 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6;A0A0A0MSP3 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 S(0.919)PS(0.081)WQRPNQGVPSTGR 183.75 4.06E-06 8529300 846.92 805.25 811.35 626.14 746.56 731.04 882.48 733.4 844.4 943.38 TRUE FALSE 774.8850066 752.8280786 756.2778226 674.3654113 716.8229343 772.430853 823.6113694 726.9879611 932.1784017 1060.253037 0.730849127 0.710045671 0.71329937 0.636041952 0.67608666 0.728534441 0.776806424 0.685674019 0.879203709 1 10.0501929 -8.459754531 2.758451274 0.999480995 0.706405763 0.876094914 0.036264175 0.083343426 1.358593534 0.037424242 0.010105565 3.47E-09 8.459754531 -0.293075232 S(ph)PSWQRPNQGVPSTGR ddPTM_A459_MK2206_30min_R2 2 SPSWQRPNQGVPSTGR 16 1 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6;A0A0A0MSP3 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 S(0.978)PS(0.022)WQRPNQGVPSTGR;S(0.95)PS(0.05)WQRPNQGVPSTGR 78.848 0.014073 250990000 18353.7 40682 11944.5 17943.4 14326.1 16547.4 13484.3 9413.3 9964.7 23414 TRUE FALSE 19758.87338 38661.79104 12342.72367 16477.36682 13763.58533 17177.1229 11713.79521 10643.65063 10831.41159 22650.0031 0.872356321 1.706922108 0.544932538 0.727477464 0.607663728 0.758371768 0.517165281 0.469918286 0.478207952 1 14.46722363 -5.28101535 24.98118275 0.621135952 1.289639239 0.537797438 0.241251711 468.6531974 598054.6632 0.058650736 0.122372093 5.24E-06 5.28101535 0.668503287 S(ph)PSWTAPPVIALQNGLSEDEALQR ddPTM_A459_MK2206_30min_R2 1 SPSWTAPPVIALQNGLSEDEALQR 24 0 A0A087X0D9;E9PFU9;Q8WV99 A0A087X0D9 ZFAND2B AN1-type zinc finger protein 2B 1 S(0.499)PS(0.499)WT(0.001)APPVIALQNGLSEDEALQR 187.54 2.26E-26 3509700 8209.5 11117 9054.7 8422.5 6848.4 10102 9729.9 8179.2 6401.1 10253 TRUE FALSE 8838.025632 10564.94595 9356.579179 7734.354808 6579.497406 10486.43869 8452.352442 9248.249523 6957.856107 9918.44545 0.891069642 1.065181635 0.943351378 0.779795064 0.663359741 1.057266357 0.852185202 0.932429338 0.701506717 1 13.2758983 -5.566551809 8.069140922 0.85309582 0.984640662 0.151836933 0.122132261 0.394913242 64.18520534 0.032793917 0.057219102 2.71E-06 5.566551809 0.131544842 S(ph)PT(ph)NS(ph)TGMWKDS(ph)PK ddPTM_A459_MK2206_30min_R2 1 SPTNSTGMWKDSPK 14 1 P37288 P37288 AVPR1A Vasopressin V1a receptor 4 S(0.989)PT(0.992)NS(0.919)T(0.1)GMWKDS(1)PK 65.172 0.034654 3821700 3796.7 5752 3703.8 3664.3 4885.7 5243.4 4104.2 1833.3 3005.7 3200.6 TRUE FALSE 4087.378271 5466.364044 3827.282843 3364.914968 4693.862869 5442.941261 3565.31361 2072.918605 3267.130353 3096.164684 1.320142398 1.765527548 1.236136716 1.08680103 1.516024937 1.757962452 1.151525831 0.66951174 1.055218532 1 11.59626649 -7.51857342 13.6073913 0.899464647 1.440086069 0.551974443 0.219262737 0.408689507 1292.3098 0.10239731 0.062353105 3.03E-08 7.51857342 0.540621423 S(ph)PTAALNESLVECPK ddPTM_A459_MK2206_30min_R1 2 SPTAALNESLVECPK 15 0 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 S(1)PTAALNESLVECPK;S(0.999)PT(0.001)AALNESLVECPK 265.93 2.20E-37 82818000 5383.8 5338.5 4691.5 3861.6 3606.2 3555.5 4188.2 3305.8 4218.6 4370.8 TRUE FALSE 4925.879539 4990.96268 4373.054051 4159.021101 3462.557418 3756.809337 3908.81282 3276.897739 4657.138566 4912.287702 1.002766906 1.016015955 0.890227592 0.846656661 0.704876756 0.764777954 0.795721476 0.667081803 0.948059 1 12.26217934 -5.526534786 1.978052579 0.793945539 1.014556533 0.368715967 0.096501752 0.308945565 2.364660597 0.026947296 0.070318069 2.97E-06 5.526534786 0.220610995 S(ph)PTAALNESLVECPK ddPTM_A459_MK2206_30min_R2 5 SPTAALNESLVECPK 15 0 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 S(0.987)PT(0.013)AALNESLVECPK;S(0.848)PT(0.152)AALNESLVECPK;S(1)PTAALNESLVECPK;S(0.913)PT(0.087)AALNESLVECPK;S(0.988)PT(0.012)AALNESLVECPK 218.83 2.69E-09 122858300 185660 191909 176051 192568 152228 132959 158372 116656 109486 165940 TRUE FALSE 199874.2723 182379.0781 181920.4525 176834.5784 146250.7638 138018.8479 137577.5662 131903.3397 119008.8944 160525.3914 1.245125588 1.136138505 1.133281476 1.101598799 0.911075579 0.859794496 0.857045511 0.821697668 0.741371152 1 17.29244199 -6.224790454 1.428488843 0.838224411 1.182562265 0.825757477 0.06595668 0.154054039 0.631201473 0.023905461 0.034318259 5.96E-07 6.224790454 0.344337853 S(ph)PTDDEVTPSAVVR ddPTM_A459_MK2206_30min_R1 1 SPTDDEVTPSAVVR 14 0 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(0.948)PT(0.052)DDEVTPSAVVR 156.2 0.00032265 4037400 176.15 294.56 363.93 204.54 281.21 255 309.14 310.68 302.62 237.63 TRUE FALSE 161.1675175 275.3840905 339.2274456 220.2937062 270.0088102 269.4378796 288.5178347 307.9637575 334.0784319 267.0693984 0.603466808 1.031133077 1.270184632 0.824855665 1.011006172 1.008868411 1.080310348 1.153122594 1.250904948 1 8.061070867 -7.294828829 1.69548457 1.150573773 0.963966716 0.190850664 0.168157181 0.685542215 3.838738439 0.095717019 0.05703154 5.07E-08 7.294828829 -0.186607057 S(ph)PTDSDVSLDSEDSGAK ddPTM_A459_MK2206_30min_R1 2 SPTDSDVSLDSEDSGAK 17 0 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(0.995)PT(0.005)DSDVSLDSEDSGAK;S(0.934)PT(0.065)DSDVSLDSEDSGAK 242.48 8.69E-23 22932000 3540.6 3863.2 3537 2731.91 2890 2774.16 2915.3 3296.8 3230.3 3344 TRUE FALSE 3239.453378 3611.704978 3296.918295 2942.322182 2774.88518 2931.230542 2720.825656 3267.976425 3566.101245 3758.279966 0.861951054 0.960999449 0.877241271 0.782890633 0.738339135 0.779939379 0.723955022 0.869540443 0.948865246 1 11.87585683 -8.260586486 2.770844552 0.990942511 0.819062015 0.461779458 0.067013643 0.278062802 3.952668284 0.07081023 0.020370359 5.49E-09 8.260586486 -0.171880496 S(ph)PTEDFR ddPTM_A459_MK2206_30min_R1 2 SPTEDFR 7 0 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.973)PT(0.027)EDFR;S(0.993)PT(0.007)EDFR 101.25 0.020043 101077000 8143 8951.9 8208.5 6144.8 7751.4 7492.5 9257.1 7449.8 9301.4 10095.6 TRUE FALSE 7450.395089 8369.129683 7651.32989 6618.073561 7442.645324 7916.718875 8639.57575 7384.667184 10268.31382 11346.31915 0.656635425 0.737607463 0.674344674 0.583279342 0.655952404 0.697734549 0.761443041 0.650842541 0.904990745 1 13.46993673 -8.393535189 3.315374994 0.997723788 0.678288093 0.8465626 0.047542955 0.088648526 1.741954217 0.048450768 0.012959969 4.04E-09 8.393535189 -0.319435695 S(ph)PTEDFR ddPTM_A459_MK2206_30min_R2 4 SPTEDFR 7 0 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.901)PT(0.099)EDFR;S(0.97)PT(0.03)EDFR;S(0.994)PT(0.006)EDFR;S(0.989)PT(0.011)EDFR 88.948 0.031607 278803400 217291 213997 227660 235661 204629 194863 231846 206578 168184 228869 TRUE FALSE 233926.966 203370.2202 235250.0708 216406.7425 196594.2373 202278.648 201404.3417 233578.4539 182812.3403 221401.0233 1.056575812 0.918560435 1.062551868 0.977442377 0.887955414 0.913630141 0.909681169 1.055001691 0.825706845 1 17.75630236 -6.007938447 24.60879948 0.932710749 1.005968254 0.217899697 0.068726401 492.6773303 1527287.326 0.018714424 0.026389177 9.82E-07 6.007938447 0.073257506 S(ph)PTFSEELPVLGDGQQLR ddPTM_A459_MK2206_30min_R1 4 SPTFSEELPVLGDGQQLR 18 0 Q8N0Z3 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 1 S(1)PTFSEELPVLGDGQQLR;S(1)PTFSEELPVLGDGQQLR;S(0.99)PT(0.01)FSEELPVLGDGQQLR;S(1)PTFSEELPVLGDGQQLR 343.22 2.63E-163 33430200 868.481 751.49 1006.07 939.06 1059.45 1164.35 1455.95 1035.86 669.708 793.864 TRUE FALSE 794.6121304 702.5678644 937.7807715 1011.386564 1017.249863 1230.274491 1358.826232 1026.803585 739.3265432 892.2138657 0.890607242 0.787443338 1.05107173 1.133569655 1.140141285 1.378900887 1.522982644 1.150849168 0.828642741 1 9.801245759 -5.539798612 1.883412575 1.201002743 0.830628556 0.321275951 0.182040175 0.409884696 2.84353354 0.058070449 0.153693215 2.89E-06 5.539798612 -0.370374187 S(ph)PTFSEELPVLGDGQQLR ddPTM_A459_MK2206_30min_R2 2 SPTFSEELPVLGDGQQLR 18 0 Q8N0Z3 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 1 S(0.993)PT(0.007)FSEELPVLGDGQQLR;S(0.983)PT(0.017)FSEELPVLGDGQQLR 234.36 2.34E-19 20173400 2844.8 3241.7 4809.2 4440.5 5916.1 8715.5 6667 4287 5084.9 5704.4 TRUE FALSE 3062.600075 3080.721892 4969.536328 4077.696946 5683.804188 9047.17446 5791.614891 4847.325619 5527.175411 5518.265895 0.554993205 0.558277174 0.900561231 0.738945354 1.029998245 1.639495927 1.049535307 0.878414653 1.00161455 1 12.42999926 -5.781470286 1.319451523 1.10904594 0.566480145 0.485411817 0.209911069 0.433201569 1.506029641 0.079191108 0.191407552 1.65E-06 5.781470286 -0.542565795 S(ph)PTGNTPPVIDSVSEK ddPTM_A459_MK2206_30min_R1 4 SPTGNTPPVIDSVSEK 16 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(1)PTGNTPPVIDSVSEK;S(0.973)PT(0.027)GNTPPVIDSVSEK;S(0.998)PT(0.002)GNTPPVIDSVSEK;S(0.989)PT(0.011)GNTPPVIDSVSEK 192.16 7.73E-07 25678100 6842.86 7078.09 7036.92 5152.99 5574.47 5705.55 7164.2 5199.55 7472.9 8655.7 TRUE FALSE 6260.838824 6617.305054 6559.273476 5549.874183 5352.427056 6028.59331 6686.28929 5154.090883 8249.734697 9728.033463 0.643587303 0.680230499 0.674265102 0.570503196 0.550206481 0.619713463 0.687321781 0.529818375 0.848037245 1 13.24793248 -8.47407657 4.070472908 0.998516107 0.622516595 0.850139904 0.052947805 0.068742192 2.45938047 0.053097672 0.013919416 3.36E-09 8.47407657 -0.375999512 S(ph)PTGNTPPVIDSVSEK ddPTM_A459_MK2206_30min_R2 4 SPTGNTPPVIDSVSEK 16 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.964)PT(0.036)GNTPPVIDSVSEK;S(1)PTGNTPPVIDSVSEK;S(0.995)PT(0.004)GNTPPVIDSVSEK;S(0.996)PT(0.004)GNTPPVIDSVSEK 265.93 4.37E-40 36613900 144454 131613 135194 128548 120580 96759 144380 108272 92188 159683 TRUE FALSE 155513.5093 125077.2898 139701.3005 118045.2172 115845.4233 100441.2315 125422.7326 122423.5222 100206.3456 154472.5568 1.006738754 0.809705571 0.904376178 0.764182452 0.749941774 0.650220555 0.811941844 0.79252603 0.648699987 1 17.23699103 -1.522879621 0.716994442 0.764215067 33.63559025 0.294307205 0.099796531 360.7161559 1.787455842 0.036654317 19061.30766 0.02999994 1.522879621 32.87137519 S(ph)PTGPSNSFLANMGGTVAHK ddPTM_A459_MK2206_30min_R1 4 SPTGPSNSFLANMGGTVAHK 20 0 H0Y6J6;Q5W012;Q96I25 H0Y6J6 RBM17 Splicing factor 45 1 S(0.8)PT(0.185)GPS(0.014)NS(0.001)FLANMGGTVAHK;S(0.954)PT(0.04)GPS(0.005)NSFLANMGGTVAHK;S(0.786)PT(0.198)GPS(0.011)NS(0.006)FLANMGGTVAHK;S(0.944)PT(0.054)GPS(0.001)NS(0.001)FLANMGGTVAHK 171.9 1.65E-11 634347000 12337.2 11721 12455.5 8422.1 11428.9 11336.2 13602.6 10125.6 12160.4 13822.8 TRUE FALSE 11287.85635 10957.96077 11610.05536 9070.771601 10973.66271 11978.04585 12695.19537 10037.07295 13424.5171 15535.27282 0.726595309 0.705360047 0.747335145 0.58388235 0.706370776 0.771022562 0.817185222 0.646082825 0.864131403 1 13.92325996 -9.05829585 0.547294812 1.014659541 0.698771437 0.643977027 0.066138262 1.269581713 0.658700504 0.1026376 0.031522808 8.74E-10 9.05829585 -0.315888104 S(ph)PTGPSNSFLANMGGTVAHK ddPTM_A459_MK2206_30min_R2 12 SPTGPSNSFLANMGGTVAHK 20 0 H0Y6J6;Q5W012;Q96I25 H0Y6J6 RBM17 Splicing factor 45 1 S(0.808)PT(0.192)GPS(0.001)NSFLANMGGTVAHK;S(0.777)PT(0.18)GPS(0.042)NS(0.001)FLANMGGTVAHK;S(0.774)PT(0.18)GPS(0.043)NS(0.003)FLANMGGTVAHK;S(0.558)PT(0.106)GPS(0.168)NS(0.168)FLANMGGTVAHK;S(0.504)PT(0.394)GPS(0.096)NS(0.006)FLANMGGTVAHK;S(0.95)PT(0.043)GPS(0.007)NSFLANMGGTVAHK;S(0.641)PT(0.227)GPS(0.104)NS(0.029)FLANMGGTVAHK;S(0.774)PT(0.224)GPS(0.002)NSFLANMGGTVAHK;S(0.681)PT(0.166)GPS(0.092)NS(0.062)FLANMGGTVAHK;S(0.949)PT(0.042)GPS(0.009)NS(0.001)FLANMGGTVAHK;S(0.695)PT(0.272)GPS(0.029)NS(0.003)FLANMGGTVAHK;S(0.496)PT(0.496)GPS(0.007)NS(0.001)FLANMGGTVAHK 174.15 3.14E-10 1006930600 657118 686679 619935 750583 646126 634043 779111 611490 536940 677844 TRUE FALSE 707427.4593 652579.5194 640603.3235 689257.9679 620755.8467 658171.9507 676812.7898 691413.8426 583642.0706 655726.0058 1.078846123 0.995201523 0.976937498 1.051137155 0.946669556 1.003730132 1.032157919 1.054424922 0.890070038 1 19.32273359 -4.760497335 24.59756763 0.997376352 1.078846231 0.22415727 0.0468082 29.58330315 771937.6211 0.011121048 0.06546298 1.74E-05 4.760497335 0.081469879 S(ph)PTHLTVSSTNTLR ddPTM_A459_MK2206_30min_R2 1 SPTHLTVSSTNTLR 14 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 S(0.5)PT(0.5)HLTVSSTNTLR 67.019 0.044634 6069900 9218.3 9568.9 9551.3 10379 11566 7323 10375 7984.6 7013.8 11601 TRUE FALSE 9924.060136 9093.72234 9869.735575 9531.002499 11111.86073 7601.681896 9012.750037 9028.214635 7623.847646 11222.46032 0.884303428 0.810314502 0.879462729 0.849279234 0.9901448 0.677363223 0.803099301 0.804477305 0.679338347 1 13.45410137 -6.764944697 25 0.781275719 0.8766428 0.179834302 0.093883717 147.4461591 1051580.603 0.030648282 0.028095833 1.72E-07 6.764944697 0.095367081 S(ph)PTKAPHLQLIEGK ddPTM_A459_MK2206_30min_R2 1 SPTKAPHLQLIEGK 14 1 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 S(0.716)PT(0.284)KAPHLQLIEGK 65.225 0.031104 23664000 324460 343280 329310 312340 318090 246510 347030 273500 277160 352960 TRUE FALSE 349300.9071 326233.2144 340289.031 286820.8229 305600.1883 255891.1108 301464.5441 309247.3891 301266.8758 341442.9441 1.023013985 0.95545455 0.996620481 0.840025626 0.895025636 0.749440324 0.882913381 0.905707365 0.88233446 1 18.381285 -5.754762865 24.971082 0.87080946 0.988072193 0.413535535 0.060671118 142.4779613 532880.6846 0.016216663 0.02728483 1.76E-06 5.754762865 0.117262733 S(ph)PTKGEDWETLK ddPTM_A459_MK2206_30min_R2 1 SPTKGEDWETLK 12 1 Q4KWH8-2;A0A2U3TZV8;Q4KWH8 Q4KWH8-2 PLCH1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1" 1 S(0.819)PT(0.181)KGEDWETLK 109.07 0.0042857 7374100 62894 56021 56111 58080 41556 30154 64733 45285 38945 59413 TRUE FALSE 67709.213 53239.0786 57981.71273 53334.67821 39924.30264 31301.5316 56233.47934 51203.90499 42332.3657 57474.35868 1.178076877 0.926310094 1.008827485 0.927973438 0.694645466 0.544617327 0.978409862 0.89089998 0.736543507 1 15.81063084 -5.99319567 3.763544061 0.79744621 1.024037968 0.351576207 0.139651513 0.264388996 8.291946441 0.042714837 0.062177203 1.02E-06 5.99319567 0.226591758 S(ph)PTKTDPKNEEEEK ddPTM_A459_MK2206_30min_R2 1 SPTKTDPKNEEEEK 14 2 A0A0A0MRN4;Q5BKZ1-3;Q5BKZ1 A0A0A0MRN4 ZNF326 DBIRD complex subunit ZNF326 1 S(0.939)PT(0.06)KT(0.001)DPKNEEEEK 106.6 0.0061853 15634000 26766 38578 42880 27675 35472 15821 42283 32206 23057 39145 TRUE FALSE 28815.22554 36662.27262 44309.5978 25413.86397 34079.19105 16423.07924 36731.19131 36415.43478 25062.45618 37867.70186 0.760944661 0.968167352 1.170115841 0.671122427 0.899954034 0.433696222 0.969987338 0.961648925 0.661842545 1 15.20868025 -5.779019312 24.99804333 0.794168403 0.966585232 0.139373461 0.189426851 452.9810308 644121.6537 0.053074121 0.078918841 1.66E-06 5.779019312 0.17241683 S(ph)PTLGIAR ddPTM_A459_MK2206_30min_R1 2 SPTLGIAR 8 0 F5GX58;F8WDL1;Q99618;J3KMY0 F5GX58 CDCA3 Cell division cycle-associated protein 3 1 S(0.995)PT(0.005)LGIAR;S(0.995)PT(0.005)LGIAR 99.013 0.018995 9106000 2653.3 1893.48 2039.89 2240.4 2287 2369.4 2997.6 2565.4 2338.4 2780.5 TRUE FALSE 2427.622902 1770.214108 1901.42795 2412.955996 2195.903947 2503.55338 2797.635573 2542.970978 2581.485048 3124.969332 0.776846952 0.566474074 0.608462915 0.772153497 0.702696159 0.801144944 0.895252169 0.813758699 0.826083322 1 11.60962632 -7.285601039 0.320212448 0.996314541 0.596862097 0.661203369 0.070408221 1.027468472 0.282010966 0.102245699 0.147850547 5.18E-08 7.285601039 -0.399452444 S(ph)PTLGIAR ddPTM_A459_MK2206_30min_R2 2 SPTLGIAR 8 0 F5GX58;F8WDL1;Q99618;J3KMY0 F5GX58 CDCA3 Cell division cycle-associated protein 3 1 S(0.998)PT(0.002)LGIAR;S(0.997)PT(0.003)LGIAR 89.886 0.02904 32810000 24080 14989.3 20234.8 20780.5 19104.8 22581.7 26328 13705.4 15514.6 24228.7 TRUE FALSE 25923.58331 14244.95316 20909.41813 19082.66668 18354.64956 23441.06242 22871.10197 15496.74284 16864.03186 23438.1195 1.106043653 0.607768603 0.892111593 0.814172258 0.783111015 1.000125561 0.975807892 0.661176885 0.719513008 1 14.5165692 -10.65525443 4.848048254 1.000010218 0.835698977 0.093406922 0.149021316 1.61E-05 2.88E-06 0.14125114 0.034256304 2.21E-11 10.65525443 -0.164311241 S(ph)PTMEQAVQTASAHLPAPAAVGR ddPTM_A459_MK2206_30min_R1 9 SPTMEQAVQTASAHLPAPAAVGR 23 0 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 S(0.786)PT(0.214)MEQAVQTASAHLPAPAAVGR;S(0.951)PT(0.049)MEQAVQTASAHLPAPAAVGR;S(0.5)PT(0.5)MEQAVQTASAHLPAPAAVGR;S(0.791)PT(0.209)MEQAVQTASAHLPAPAAVGR;S(0.5)PT(0.5)MEQAVQTASAHLPAPAAVGR;S(0.792)PT(0.208)MEQAVQTASAHLPAPAAVGR;S(0.771)PT(0.229)MEQAVQTASAHLPAPAAVGR;S(0.963)PT(0.037)MEQAVQTASAHLPAPAAVGR;S(0.754)PT(0.246)MEQAVQTASAHLPAPAAVGR 203.24 2.39E-23 643256000 8713.49 7542 7947 6300.01 8714.64 8716.55 10209.29 7183.36 7253.59 8500.56 TRUE FALSE 7972.361919 7051.014429 7407.579782 6785.237862 8367.517435 9210.073528 9528.246892 7120.556641 8007.626638 9553.673549 0.8344813 0.738042219 0.775364549 0.710222913 0.87584293 0.964034775 0.997338547 0.745321326 0.83817252 1 13.22183987 -6.384154491 5.703852775 0.900575354 0.763992274 0.43764583 0.077504022 0.247142144 10.52006124 0.025591356 0.029029351 4.13E-07 6.384154491 -0.13658308 S(ph)PTMEQAVQTASAHLPAPAAVGR ddPTM_A459_MK2206_30min_R2 16 SPTMEQAVQTASAHLPAPAAVGR 23 0 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 S(0.787)PT(0.213)MEQAVQTASAHLPAPAAVGR;S(0.5)PT(0.5)MEQAVQTASAHLPAPAAVGR;S(0.745)PT(0.255)MEQAVQTASAHLPAPAAVGR;S(0.538)PT(0.462)MEQAVQTASAHLPAPAAVGR;S(0.5)PT(0.5)MEQAVQTASAHLPAPAAVGR;S(0.5)PT(0.5)MEQAVQTASAHLPAPAAVGR;S(0.5)PT(0.5)MEQAVQTASAHLPAPAAVGR;S(0.5)PT(0.5)MEQAVQTASAHLPAPAAVGR;S(0.6)PT(0.4)MEQAVQTASAHLPAPAAVGR;S(0.778)PT(0.222)MEQAVQTASAHLPAPAAVGR;S(0.635)PT(0.339)MEQAVQT(0.005)AS(0.02)AHLPAPAAVGR;S(0.5)PT(0.5)MEQAVQTASAHLPAPAAVGR;S(0.964)PT(0.036)MEQAVQTASAHLPAPAAVGR;S(0.78)PT(0.22)MEQAVQTASAHLPAPAAVGR;S(0.535)PT(0.465)MEQAVQTASAHLPAPAAVGR;S(0.742)PT(0.258)MEQAVQTASAHLPAPAAVGR 211.18 2.97E-24 971015900 225168.6 297341.9 294856.8 349737 317868.7 313104.3 353668.6 251634.9 263955.6 316242.9 TRUE FALSE 242407.6811 282576.3336 304687.1785 321162.3683 305387.5777 325019.7035 307231.488 284524.4454 286913.981 305923.9201 0.792378971 0.923681723 0.995957356 1.049811235 0.998246811 1.06242004 1.00427416 0.930049685 0.937860566 1 18.22281339 -4.829966324 2.155026633 0.999305196 0.749738012 0.721915524 0.039029518 0.340760514 1.993155223 0.011676225 0.16074208 1.48E-05 4.829966324 -0.249567184 S(ph)PTNSLLK ddPTM_A459_MK2206_30min_R2 2 SPTNSLLK 8 0 Q14106-2;Q14106 Q14106-2 TOB2 Protein Tob2 1 S(0.999)PT(0.001)NSLLK;S(1)PTNSLLK 83.883 0.037826 16670700 65091 76474 81132 79936 83072 66249 95128 76319 81007 86845 TRUE FALSE 70074.41701 72676.41236 83836.90039 73404.9731 79810.17588 68770.15212 82637.57933 86294.15534 88052.84243 84011.25476 0.834107492 0.865079477 0.997924631 0.873751658 0.949993856 0.818582609 0.983648912 1.027173747 1.048107693 1 16.35829499 -7.472681711 6.046363621 1.024431213 0.895627259 0.598940002 0.050744107 0.149762203 13.04855068 0.021964296 0.014361143 3.37E-08 7.472681711 -0.128803954 S(ph)PTPAPFSPFNPTSLIK ddPTM_A459_MK2206_30min_R2 2 SPTPAPFSPFNPTSLIK 17 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.962)PT(0.038)PAPFSPFNPTSLIK;S(0.998)PT(0.002)PAPFSPFNPTSLIK 147.92 0.00037947 0 1035.8 1306.9 983.92 3193.66 2414.9 1309.23 2874.3 1772.45 1244.7 2398.1 TRUE FALSE 1115.101644 1242.001246 1016.723402 2932.727762 2320.078892 1359.053665 2496.900957 2004.115301 1352.961756 2319.850193 0.480678299 0.535379935 0.438271146 1.264188425 1.000098583 0.585836822 1.076319913 0.863898586 0.58321083 1 11.17981593 -5.727327885 24.99922339 0.90195076 0.48983634 0.494388493 0.197143588 163.6739675 119950.268 0.05430161 0.094047092 1.87E-06 5.727327885 -0.41211442 S(ph)PTPESSTIASYVTLR ddPTM_A459_MK2206_30min_R1 2 SPTPESSTIASYVTLR 16 0 A0JP02;B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;H0YGJ6 A0JP02 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 S(1)PTPESSTIASYVTLR;S(1)PTPESSTIASYVTLR 201.16 6.27E-07 17269900 834.07 829.75 865.84 388.65 681.91 589.35 764.91 674.54 603.61 787.47 TRUE FALSE 763.1279666 775.7331242 807.0691932 418.5838903 654.7480807 622.7184877 713.8842496 668.6425679 666.3574195 885.0277287 0.862264471 0.876507141 0.911914019 0.472961329 0.73980516 0.703614664 0.806623597 0.755504654 0.752922646 1 9.789578847 -10.19530349 17.55953186 1 0.7621554 0.269123966 0.116272288 0 0 0.118128521 0.028650375 6.38E-11 10.19530349 -0.2378446 S(ph)PTPESSTIASYVTLR ddPTM_A459_MK2206_30min_R2 3 SPTPESSTIASYVTLR 16 0 A0JP02;B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;H0YGJ6 A0JP02 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 S(0.981)PT(0.018)PESSTIASYVTLR;S(0.987)PT(0.013)PESSTIASYVTLR;S(0.994)PT(0.005)PES(0.001)STIASYVTLR 92.952 0.010387 18712200 6766.5 10113.2 8037.7 9671.8 8308.4 5564.26 6621.1 6618.3 8632.4 5706.8 TRUE FALSE 7284.548443 9610.993194 8305.672906 8881.583001 7982.17047 5776.011813 5751.741617 7483.334534 9383.230548 5520.587583 1.319524115 1.740936639 1.504490741 1.608811176 1.445891465 1.04626758 1.041871274 1.355532255 1.699679682 1 12.43060611 -6.55810616 8.17213154 1.23924671 1.551537504 0.330991474 0.213116064 0.293559148 59.42743824 0.072230266 0.072551808 2.77E-07 6.55810616 0.312290795 S(ph)PTPPLFSLPEAR ddPTM_A459_MK2206_30min_R1 1 SPTPPLFSLPEAR 13 0 A0A087WWS1;Q96FV9;J3KRD7;J3QQZ3;J3KT14;Q96FV9-2 A0A087WWS1 THOC1 THO complex subunit 1 1 S(0.999)PT(0.001)PPLFSLPEAR 85.672 0.027492 2506700 746.45 627.56 907.79 747.55 510.18 429.5 617.33 577.16 766.58 825.78 TRUE FALSE 682.9605077 586.7057299 846.171744 805.1264305 489.8584503 453.8179188 576.1490421 572.113951 846.2687342 928.0838607 0.735882323 0.632168875 0.911740609 0.867514742 0.527817012 0.488983742 0.620794161 0.616446396 0.911845114 1 9.858111361 -8.396335312 4.15182403 0.995061818 0.675558071 0.442821829 0.127395624 0.227024258 6.102011119 0.137140202 0.036062436 4.01E-09 8.396335312 -0.319503747 S(ph)PTPPLFSLPEAR ddPTM_A459_MK2206_30min_R2 1 SPTPPLFSLPEAR 13 0 A0A087WWS1;Q96FV9;J3KRD7;J3QQZ3;J3KT14;Q96FV9-2 A0A087WWS1 THOC1 THO complex subunit 1 1 S(0.994)PT(0.006)PPLFSLPEAR 126.32 0.0020397 1565300 736.44 1344.1 798.34 839.6 1230.3 482.78 867.15 593.26 915.75 759.64 TRUE FALSE 792.8224126 1277.353949 824.9562571 771.0019943 1181.99224 501.1525312 753.2921634 670.801119 995.4002797 734.853009 1.078885713 1.738244156 1.122613975 1.049192131 1.608474383 0.681976565 1.025092303 0.91283714 1.35455699 1 9.52131189 -6.759550735 24.99997563 0.991332431 1.316793367 0.284054427 0.257609126 68.23935509 903288.3406 0.085642533 0.081530415 1.74E-07 6.759550735 0.325460935 S(ph)PTPPPSSKPSSIPR ddPTM_A459_MK2206_30min_R2 2 SPTPPPSSKPSSIPR 15 1 H7C5F9;B4E2D5;R4GND2;F6S7C4;Q8NEM7-2;Q8NEM7;Q8NEM7-3 H7C5F9 SUPT20H Transcription factor SPT20 homolog 1 S(0.5)PT(0.5)PPPSSKPSSIPR;S(0.565)PT(0.435)PPPSSKPSSIPR 103.3 0.036115 15458000 87798.5 104391.1 89270.2 94944.9 80769 85156.9 98234.5 60375.2 65452 73768.3 TRUE FALSE 94520.42067 99207.18977 92246.42391 87187.59796 77597.60323 88397.6055 85336.19215 68266.44594 71144.89665 71361.24641 1.324534329 1.390211001 1.29266834 1.221777958 1.087391366 1.238734046 1.195833824 0.956631917 0.996968246 1 16.12285319 -6.466552183 0.391687105 0.961848057 1.431714539 0.768136277 0.069225732 0.889696267 0.256297154 0.077129342 0.171142821 3.42E-07 6.466552183 0.469866482 S(ph)PTPPPTLHLVPEPAAPPPPPPR ddPTM_A459_MK2206_30min_R1 2 SPTPPPTLHLVPEPAAPPPPPPR 23 0 A0A087WWH3;Q9NZM4-2;Q9NZM4 A0A087WWH3 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein 1 S(0.5)PT(0.5)PPPT(0.001)LHLVPEPAAPPPPPPR;S(0.499)PT(0.499)PPPT(0.003)LHLVPEPAAPPPPPPR 140.93 1.64E-06 9039300 2830.4 3031.6 3252.2 2537.42 3086.2 3008.8 3231.9 2777.34 3038.8 2777.8 TRUE FALSE 2589.659617 2834.242289 3031.449725 2732.852528 2963.270119 3179.155656 3016.305848 2753.058009 3354.694134 3121.934835 0.829504699 0.907847998 0.971016336 0.875371419 0.949177441 1.01832864 0.966165537 0.881843522 1.074556104 1 11.60822471 -1.935452604 0.307367944 0.992107195 3.17E-14 0.428685539 0.053355316 46.16397118 0.833718098 0.053266912 24.25985486 0.011602388 1.935452604 -0.992107195 S(ph)PTPPPTLHLVPEPAAPPPPPPR ddPTM_A459_MK2206_30min_R2 1 SPTPPPTLHLVPEPAAPPPPPPR 23 0 A0A087WWH3;Q9NZM4-2;Q9NZM4 A0A087WWH3 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein 1 S(0.817)PT(0.163)PPPT(0.02)LHLVPEPAAPPPPPPR 60.621 0.0070012 8557600 5033.6 9176.8 6586.9 10566 7393.9 8319.4 7694.4 7389.6 7085.4 10049 TRUE FALSE 5418.976286 8721.093456 6806.503958 9702.724001 7103.578335 8636.000597 6684.116037 8355.446092 7701.675285 9721.101953 0.557444651 0.89713013 0.70017823 0.998109479 0.730737973 0.888376713 0.687588307 0.859516352 0.792263606 1 13.24690415 -14.52287875 0.196805221 1.881540106 0.764274299 0.227719941 0.119556595 217.3342247 2.137252379 75.56689256 0.2786789 3.00E-15 14.52287875 -1.117265807 S(ph)PTQHCLAR ddPTM_A459_MK2206_30min_R2 2 SPTQHCLAR 9 0 O75161-2;O75161 O75161-2 NPHP4 Nephrocystin-4 1 S(0.997)PT(0.003)QHCLAR;S(0.999)PT(0.001)QHCLAR 94.538 0.015332 9472400 23919.3 25703 20377.6 27810 20734 24290 23300 19951.1 21444 20961.8 TRUE FALSE 25750.58 24426.6264 21056.97901 25537.83404 19919.87898 25214.37297 20240.68201 22558.77727 23309.16036 20277.81818 1.269889086 1.204598354 1.038424293 1.259397525 0.982348239 1.243446052 0.998168631 1.11248543 1.149490549 1 14.30761481 -1.522878745 0.58356778 1.093094706 11.24718414 0.263453878 0.093906415 215.0012291 1.763307022 0.040612176 2769.447418 0.03 1.522878745 10.15408943 S(ph)PTQSQPAFLATNEEK ddPTM_A459_MK2206_30min_R1 1 SPTQSQPAFLATNEEK 16 0 J3QT39;Q49A88;A0A0A0MR27;Q49A88-2;Q49A88-3;Q49A88-6;C9JSI8;Q49A88-4 J3QT39 CCDC14 Coiled-coil domain-containing protein 14 1 S(0.975)PT(0.025)QSQPAFLATNEEK 160.03 5.72E-05 3050100 522.55 548.88 773.76 540.34 585.96 495.58 655.95 498.88 512.15 580.37 TRUE FALSE 478.1043785 513.1478122 721.239327 581.9570804 562.6199724 523.6393113 612.1927723 494.5183448 565.3898252 652.2706172 0.732984694 0.786709992 1.105736343 0.892201895 0.862556058 0.802794573 0.938556415 0.758149044 0.866802536 1 9.349326831 -6.28726657 8.092437823 0.859257146 0.888954315 0 0.110163381 1.72782345 482.7089766 0.035124133 0.04053065 5.16E-07 6.28726657 0.029697168 S(ph)PTQSQPAFLATNEEK ddPTM_A459_MK2206_30min_R2 1 SPTQSQPAFLATNEEK 16 0 J3QT39;Q49A88;A0A0A0MR27;Q49A88-2;Q49A88-3;Q49A88-6;C9JSI8;Q49A88-4 J3QT39 CCDC14 Coiled-coil domain-containing protein 14 1 S(1)PTQSQPAFLATNEEK 291 1.14E-74 2718300 8487.6 8793.7 12225 9433.7 6892.9 7576.2 9758.4 10126 6573.9 12182 TRUE FALSE 9137.417182 8357.017645 12632.5754 8662.936533 6622.250112 7864.5176 8477.110358 11449.50297 7145.685939 11784.50234 0.775375737 0.709153209 1.071965115 0.735112632 0.561945674 0.667361028 0.719343941 0.971572888 0.606362979 1 13.52460321 -10.06178485 18.78036189 1 0.761501003 0.194353418 0.147877313 0 0 0.147030652 0.035660171 8.67E-11 10.06178485 -0.238498997 S(ph)PTSAPTQR ddPTM_A459_MK2206_30min_R1 1 SPTSAPTQR 9 0 Q63HR2-6;Q63HR2;Q63HR2-4;Q63HR2-5;F8VV64;Q63HR2-2;H0YID7 Q63HR2-6 TNS2 Tensin-2 1 S(0.987)PT(0.005)S(0.008)APTQR 85.161 0.035538 7886600 724.75 1041.5 764.98 589 842.23 999.61 1074.8 688.65 598.77 930.62 TRUE FALSE 663.1062067 973.6981607 713.055289 634.3648821 808.6821956 1056.207054 1003.102053 682.6292057 661.0142842 1045.912231 0.633997946 0.930955898 0.681754422 0.606518275 0.773183611 1.009842913 0.959069053 0.652663947 0.631997853 1 10.03054608 -6.528015959 24.99866467 0.841971155 0.722005727 0.163020359 0.145998298 323.5944839 1574656.249 0.051246142 0.051407108 2.96E-07 6.528015959 -0.119965428 S(ph)PTSSPTPQR ddPTM_A459_MK2206_30min_R1 2 SPTSSPTPQR 10 0 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 1 S(1)PTSSPTPQR;S(0.992)PT(0.005)S(0.002)S(0.001)PTPQR 117.14 0.0061178 44430000 1830.14 1724.19 2096.99 1718.15 2385.7 1816.45 1810.55 1764.85 1590.64 1491.52 TRUE FALSE 1674.476983 1611.944918 1954.652161 1850.482211 2290.672517 1919.295829 1689.771513 1749.420103 1755.99272 1676.300758 0.998912024 0.961608417 1.166050992 1.103908235 1.366504493 1.144959113 1.008036001 1.043619466 1.047540372 1 10.7110653 -7.260106924 24.78947401 1.028433913 1.128359182 0.180861824 0.102659571 214.3154483 3987262.281 0.04528004 0.033131311 5.49E-08 7.260106924 0.099925269 S(ph)PTSSPTPQR ddPTM_A459_MK2206_30min_R2 2 SPTSSPTPQR 10 0 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 1 S(0.998)PT(0.002)SSPTPQR;S(0.997)PT(0.003)SSPTPQR 97.452 0.020615 136578000 5513.8 9975.2 10467.3 13657.1 5857 10563 8967.2 7653 7842.4 8040.4 TRUE FALSE 5935.940767 9479.846073 10816.27456 12541.27124 5627.024751 10964.98237 7789.795868 8653.273377 8524.517776 7778.042406 0.763166419 1.218795884 1.390616558 1.6123943 0.723449996 1.409735483 1.001511108 1.112525868 1.095972139 1 12.92519139 S(ph)PTSSPTPQRR ddPTM_A459_MK2206_30min_R1 1 SPTSSPTPQRR 11 1 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 1 S(0.993)PT(0.006)SSPTPQRR 87.831 0.016172 12284000 361.19 425.13 359.43 156.46 346.12 353.13 383.8 287.32 119.46 262.62 TRUE FALSE 330.4688938 397.4539597 335.032893 168.5105763 332.3333075 373.1239154 358.1974023 284.8079915 131.8782945 295.1553483 1.119643929 1.346592437 1.13510697 0.570921643 1.125960649 1.264161119 1.213589401 0.964942676 0.446809774 1 8.205330674 -8.014439723 17.02439445 0.717555312 1.105330398 0.306366848 0.231374713 12.37921139 14588.57048 0.149326582 0.061836858 9.67E-09 8.014439723 0.387775087 S(ph)PTSSVATPSSTISTPTKR ddPTM_A459_MK2206_30min_R2 3 SPTSSVATPSSTISTPTKR 19 1 A0A2R8YE27;A0A2R8YE71;A0A2R8Y7K8;A0A2R8Y5S6;A0A2R8Y622;A0A2R8YGJ7;A0A2U3TZH5;A0A2R8Y700;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2-4;Q8WXI2-2;Q8WXI2-5;Q8WXI2 A0A2R8YE27 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 S(0.84)PT(0.09)S(0.068)S(0.002)VATPSSTISTPTKR;S(0.956)PT(0.044)SSVATPSSTISTPTKR;S(0.483)PT(0.483)S(0.026)S(0.008)VATPSSTISTPTKR 136.34 9.07E-05 34169300 42957.2 63998 53419 65326 54045 51849 55587.8 42203.3 55119 50327.8 TRUE FALSE 46246.03626 60819.95238 55199.9628 59988.65683 51922.92175 53822.15003 48289.05509 47719.41622 59913.15099 48685.60801 0.949891316 1.249238838 1.133804528 1.232164068 1.066494265 1.105504321 0.991854822 0.980154468 1.230613182 1 15.57120774 -6.471308361 20.53477244 1.059354753 1.148562834 0.12528258 0.101303578 92.97218623 37019.49505 0.030392333 0.034459761 3.38E-07 6.471308361 0.08920808 S(ph)PTTTQSPK ddPTM_A459_MK2206_30min_R2 2 SPTTTQSPK 9 0 Q14669;Q14669-2;Q14669-3;Q14669-4 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.993)PT(0.003)T(0.004)TQSPK;S(0.996)PT(0.003)TTQSPK 87.568 0.032348 22354200 77705 50137 59071 62898 63829 38257 47338 86245 46737 55838 TRUE FALSE 83654.15455 47647.26949 61040.39766 57759.0322 61322.75275 39712.89694 41122.46374 97517.51762 50802.09978 54016.01063 1.548691833 0.882095307 1.130042684 1.069294669 1.135269932 0.735206034 0.761301386 1.805344684 0.940500773 1 15.72109947 -10.07775283 14.52208463 0.999946717 1.104170488 0.010396897 0.319671159 0 0 0.305129148 0.074004689 8.36E-11 10.07775283 0.104223771 S(ph)PTVLCQK ddPTM_A459_MK2206_30min_R2 2 SPTVLCQK 8 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(0.998)PT(0.002)VLCQK;S(1)PTVLCQK 95.775 0.021615 16077200 69290 61184 63510 68318 54200 47909 67116 62201 47686 59701 TRUE FALSE 74594.89567 58145.69153 65627.3917 62736.20086 52071.83567 49732.21057 58303.58858 70330.88427 51833.64208 57752.96126 1.291620275 1.006800175 1.136346782 1.086285439 0.901630575 0.861119664 1.009534183 1.217788365 0.897506222 1 15.8176073 -1.52287919 0.904438814 1.003265699 138.1187474 0.374208482 0.106550445 1090.802761 2.365758579 0.037436506 308772.5209 0.029999969 1.52287919 137.1154817 S(ph)PTVPVPGSK ddPTM_A459_MK2206_30min_R2 1 SPTVPVPGSK 10 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 S(0.994)PT(0.006)VPVPGSK 94.82 0.024578 0 31405 20083 18829 21535 20064 16214 22034 18625 13945 26751 TRUE FALSE 33809.39095 19085.70742 19456.74946 19775.52161 19276.18655 16831.03513 19140.90933 21059.35145 15157.91089 25878.11706 1.306485741 0.737523035 0.751861096 0.764179309 0.74488366 0.650396437 0.739656185 0.813789945 0.585742419 1 14.65944503 -4.760997758 24.95874241 0.744651929 1.306486385 0.723421893 0.102287909 4.91257797 277326.0647 0.023157904 0.132506487 1.73E-05 4.760997758 0.561834456 S(ph)PVAPAR ddPTM_A459_MK2206_30min_R2 2 SPVAPAR 7 0 O15525 O15525 MAFG Transcription factor MafG 1 S(1)PVAPAR;S(1)PVAPAR 101.54 0.019856 10610700 21156.5 17466.6 18239.7 25040 21302.7 19868.1 21964.1 21894 23847 25437 TRUE FALSE 22776.25791 16599.23404 18847.80249 22994.1519 20466.24896 20624.19447 19080.18729 24755.62097 25921.16895 24606.99277 0.925601032 0.674573858 0.765953104 0.934455994 0.831724915 0.838143639 0.775396956 1.00604008 1.053406615 1 14.58678074 -7.799671166 7.694445836 1.023992037 0.818585671 0.612684681 0.072478374 0.151792002 25.09403586 0.040194992 0.019479603 1.59E-08 7.799671166 -0.205406367 S(ph)PVCSCESASPCPK ddPTM_A459_MK2206_30min_R2 2 SPVCSCESASPCPK 14 0 Q5VYV7 Q5VYV7 SLX4IP Protein SLX4IP 1 S(1)PVCSCESASPCPK;S(1)PVCSCESASPCPK 122.63 0.0017462 7596500 23724 34412 24238 47811 33842 60109 32972 29235 34853 27642 TRUE FALSE 25540.32768 32703.15012 25046.08282 43904.68836 32513.19304 62396.49012 28642.73679 33056.11488 37884.45094 26740.0438 0.9551341 1.223002863 0.936650778 1.64190787 1.215899019 2.333447566 1.071155193 1.23620272 1.41676847 1 14.70671421 -5.75410287 24.9729859 1.441785298 1.05673657 0.183298519 0.36248512 282.7057058 962299.823 0.098074124 0.165571126 1.76E-06 5.75410287 -0.385048728 S(ph)PVDSGTILR ddPTM_A459_MK2206_30min_R1 2 SPVDSGTILR 10 0 P49454 P49454 CENPF Centromere protein F 1 S(1)PVDSGTILR;S(1)PVDSGTILR 106.67 0.01176 12114300 1531.3 1846.96 1461.29 1338.77 1959.66 1718.54 1888.14 1243.49 1825.97 1834.58 TRUE FALSE 1401.054894 1726.722568 1362.101706 1441.882297 1881.602593 1815.84225 1762.185626 1232.618298 2015.786116 2061.861621 0.679509662 0.837458029 0.660617421 0.699310896 0.912574624 0.880680949 0.854657562 0.597818149 0.977653445 1 11.0097318 -6.250280216 24.24783625 0.850165543 0.723483097 0.292591451 0.112556361 766.9204789 1666445.864 0.033114638 0.042322509 5.62E-07 6.250280216 -0.126682446 S(ph)PVDSGTILR ddPTM_A459_MK2206_30min_R2 1 SPVDSGTILR 10 0 P49454 P49454 CENPF Centromere protein F 1 S(1)PVDSGTILR 99.343 0.018595 9533300 23889 15826 22713 19380 15439 14285 22465 18472 14892 15003 TRUE FALSE 25717.96021 15040.10385 23470.24008 17796.59201 14832.78729 14828.62568 19515.31851 20886.35382 16187.27924 14513.45334 1.77200833 1.036287057 1.617136841 1.226213472 1.022002616 1.021715876 1.34463646 1.439102971 1.115329265 1 13.82510322 -4.749117452 24.98065827 1.223065067 1.772009603 0.42239277 0.198487587 605.285315 1227040.194 0.050116845 0.847598432 1.78E-05 4.749117452 0.548944536 S(ph)PVEGLGR ddPTM_A459_MK2206_30min_R2 2 SPVEGLGR 8 0 Q9Y5U2-2;Q9Y5U2;A6NCC9;E9PME3;C9JHT9;C9JJV1 Q9Y5U2-2 TSSC4 Protein TSSC4 1 S(1)PVEGLGR;S(1)PVEGLGR 104.42 0.014617 19838000 42112 37391 55520 57464 42337 57292 59792 43059 36259 47711 TRUE FALSE 45336.1271 35534.21731 57371.00909 52769.00738 40674.63665 59472.28721 51941.23858 48686.95914 39412.74228 46154.19398 0.982275351 0.76990224 1.243029163 1.143319877 0.881277153 1.288556512 1.125385021 1.054876165 0.853936314 1 15.49417413 -5.25168817 24.97712019 1.080876978 0.876088804 0.240338953 0.140148024 927.1989795 2374950.352 0.035591489 0.091541628 5.60E-06 5.25168817 -0.204788174 S(ph)PVFTPR ddPTM_A459_MK2206_30min_R2 1 SPVFTPR 7 0 P52735-3 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 1 S(1)PVFTPR 80.219 0.0453 6472500 23255 23162 25579 20124 16748 15397 16880 13236 13187 26480 TRUE FALSE 25035.42068 22011.80876 26431.79109 18479.80483 16090.38937 15982.94362 14663.63572 14965.99065 14333.98142 25615.95977 0.977336821 0.859300567 1.031848556 0.721417624 0.628139235 0.62394475 0.572441394 0.584244775 0.559572296 1 14.64475533 -5.908228112 4.641448044 0.63715098 0.9448721 0.512881382 0.127179984 0.151112407 5.716921652 0.034136996 0.05174183 1.24E-06 5.908228112 0.307721119 S(ph)PVGKS(ph)PPSTGSTYGSSQK ddPTM_A459_MK2206_30min_R2 1 SPVGKSPPSTGSTYGSSQK 19 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 S(1)PVGKS(0.995)PPS(0.003)T(0.001)GSTYGSSQK 82.302 0.010291 9982900 54240 29506 36706 36879 28474 21664 44946 34107 20804 47358 TRUE FALSE 58392.6561 28040.77495 37929.75972 33865.86773 27355.96769 22488.4387 39044.53621 38564.90201 22613.49431 45812.71234 1.274595044 0.612074106 0.82793089 0.739224246 0.597126131 0.490877696 0.852264234 0.841794778 0.493607411 1 15.48346036 -4.75536548 24.99861653 0.709809878 1.274595969 0.523884049 0.159269 157.2062915 646957.8711 0.038452322 0.343770667 1.76E-05 4.75536548 0.56478609 S(ph)PVGLSSDGISSSSSSSR ddPTM_A459_MK2206_30min_R1 2 SPVGLSSDGISSSSSSSR 18 0 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 S(1)PVGLSSDGISSSSSSSR;S(1)PVGLSSDGISSSSSSSR 200.9 1.49E-10 7299600 686.22 786.02 703.33 544.57 648.22 575.37 861.89 551.36 905.39 1000.29 TRUE FALSE 627.8533855 734.8499551 655.5899192 586.5128758 622.4000248 607.9469522 804.3948907 546.5395176 999.5085305 1124.213477 0.558482351 0.653656952 0.583154296 0.521709522 0.553631528 0.540775364 0.715517922 0.486152789 0.889073606 1 10.1347003 -8.400589189 4.265062355 0.994939023 0.580843457 0.845294743 0.06358351 0.074899121 2.088096014 0.059323576 0.015569381 3.98E-09 8.400589189 -0.414095566 S(ph)PVGLSSDGISSSSSSSR ddPTM_A459_MK2206_30min_R2 4 SPVGLSSDGISSSSSSSR 18 0 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 S(1)PVGLSSDGISSSSSSSR;S(1)PVGLSSDGISSSSSSSR;S(1)PVGLSSDGISSSSSSSR;S(1)PVGLSSDGISSSSSSSR 252.37 3.90E-33 58073000 9307.5 12455.2 8861.5 7211.2 7693.7 6499.6 7329.9 9501.3 5202.2 7269 TRUE FALSE 10020.08936 11836.69288 9156.937987 6622.021893 7391.60668 6746.946832 6367.475325 10743.15253 5654.677953 7031.813125 1.424965251 1.683305951 1.302215776 0.941723248 1.051166541 0.959488927 0.905523968 1.527792668 0.80415646 1 12.77968102 -5.530700788 4.216169551 1.043883906 1.548338223 0.552023962 0.191220073 0.145514132 6.153426067 0.050960474 0.099834198 2.95E-06 5.530700788 0.504454317 S(ph)PVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK ddPTM_A459_MK2206_30min_R1 1 SPVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK 51 0 P16989-2;P16989;P16989-3 P16989-2 YBX3 Y-box-binding protein 3 1 S(0.5)PVGS(0.5)GAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK 72.574 1.52E-11 22637000 2254 2604.2 2401.4 1746.8 1889.8 1825.8 2380.5 2107.8 2780.5 3661.5 TRUE FALSE 2062.285464 2434.666107 2238.399659 1881.338839 1814.525264 1929.175218 2221.701188 2089.371727 3069.542925 4115.114263 0.501149016 0.591639977 0.543945931 0.457177789 0.440941648 0.468802345 0.539888092 0.507731157 0.745919245 1 12.00671677 -8.524692848 2.142251392 0.999455432 0.503989202 0.929338244 0.043289179 0.083566865 0.884658909 0.046582726 0.012905614 2.99E-09 8.524692848 -0.49546623 S(ph)PVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK ddPTM_A459_MK2206_30min_R2 1 SPVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK 51 0 P16989-2;P16989;P16989-3 P16989-2 YBX3 Y-box-binding protein 3 1 S(0.5)PVGS(0.5)GAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK 61.859 2.54E-07 17246000 145470 94278 103520 95268 86751 72133 113070 84854 57041 131190 TRUE FALSE 156607.295 89596.29161 106971.3051 87484.29965 83344.71985 74878.07186 98223.77318 95944.70915 62002.32307 126909.281 1.234009788 0.705986913 0.842895841 0.689345168 0.656726751 0.590012576 0.7739684 0.756010186 0.488556255 1 16.95343805 S(ph)PVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKK ddPTM_A459_MK2206_30min_R2 2 SPVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKK 52 1 P16989-2;P16989;P16989-3 P16989-2 YBX3 Y-box-binding protein 3 1 S(0.711)PVGS(0.289)GAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKK;S(0.78)PVGS(0.22)GAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKK 78.639 9.22E-17 13733900 43827 26606 32408 29010 26240 16381.1 31903 27048 19338.8 41615 TRUE FALSE 47182.42882 25284.78473 33488.46654 26639.7902 25209.68575 17004.49424 27714.09778 30583.26647 21020.85387 40257.10596 1.17202734 0.628082524 0.831864729 0.661741314 0.626217041 0.422397334 0.688427474 0.759698586 0.522165053 1 15.29695584 -2.981278002 1.68017502 0.663195019 199.6662395 0.458191017 0.155256548 457.5559439 4.277923827 0.041121385 348461.9275 0.001044052 2.981278002 199.0030445 S(ph)PVIGSEVFLPNSNHVASGAGEAEER ddPTM_A459_MK2206_30min_R1 2 SPVIGSEVFLPNSNHVASGAGEAEER 26 0 P29590-2;P29590;P29590-9;P29590-8;P29590-5;P29590-3;P29590-12;P29590-13;P29590-11;H3BVD2 P29590-2 PML Protein PML 1 S(0.999)PVIGS(0.001)EVFLPNSNHVASGAGEAEER;S(0.991)PVIGS(0.009)EVFLPNSNHVASGAGEAEER 146.38 6.63E-11 21494600 925.29 397.18 545.72 410.83 1044.24 1047.11 1215.07 873.44 616.45 854.78 TRUE FALSE 846.5892266 371.3235098 508.6780469 442.4721978 1002.64571 1106.396463 1134.014897 865.8036062 680.5321835 960.6765997 0.881242686 0.386522905 0.529499779 0.460583924 1.043687033 1.151684619 1.180433559 0.901243568 0.708388425 1 9.907907036 -6.265580788 24.93857827 1.009483683 0.549255032 0.600741048 0.1726353 236.7301952 1425531.135 0.054992105 0.064623021 5.43E-07 6.265580788 -0.460228651 S(ph)PVIGSEVFLPNSNHVASGAGEAEER ddPTM_A459_MK2206_30min_R2 4 SPVIGSEVFLPNSNHVASGAGEAEER 26 0 P29590-2;P29590;P29590-9;P29590-8;P29590-5;P29590-3;P29590-12;P29590-13;P29590-11;H3BVD2 P29590-2 PML Protein PML 1 S(0.996)PVIGS(0.004)EVFLPNSNHVASGAGEAEER;S(0.995)PVIGS(0.005)EVFLPNSNHVASGAGEAEER;S(0.997)PVIGS(0.003)EVFLPNSNHVASGAGEAEER;S(1)PVIGSEVFLPNSNHVASGAGEAEER 149.74 4.10E-11 44913700 20676.9 35823.7 32555.5 46680.2 40729.3 52557 47381.7 33326.8 38956.5 34012.8 TRUE FALSE 22259.93936 34044.74715 33640.88412 42866.27834 39130.06303 54557.09346 41160.42587 37682.72719 42344.86595 32902.96512 0.676532929 1.034701493 1.022427128 1.302808977 1.189256436 1.658120879 1.250964031 1.145268429 1.286962005 1 15.00592998 -4.711441969 0.963782544 1.281378831 0.328102458 0.525707818 0.166975902 1.774604675 1.196616598 0.056658038 1.827973999 1.94E-05 4.711441969 -0.953276373 S(ph)PVISRPK ddPTM_A459_MK2206_30min_R2 2 SPVISRPK 8 1 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2 A0A0U1RRM6 ENAH Protein enabled homolog 1 S(1)PVISRPK;S(1)PVISRPK 67.726 0.04327 54201100 166637 139103 134933 164855 119104 120044 157825 150623 96211 154238 TRUE FALSE 179394.8568 132195.3473 139431.5989 151385.8192 114427.3785 124612.3585 137102.3879 170309.9433 104579.2589 149205.2267 1.202336277 0.885996759 0.934495406 1.014614719 0.766912668 0.835174218 0.918884619 1.141447569 0.700908817 1 17.18693855 -4.758211565 24.89452183 0.912713536 1.2023367 0.347127951 0.119866529 98.63828007 760614.4064 0.028917158 0.201522899 1.74E-05 4.758211565 0.289623165 S(ph)PVLEEAPFSR ddPTM_A459_MK2206_30min_R1 2 SPVLEEAPFSR 11 0 Q9BZL4-3;K7EL81 Q9BZL4-3 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 S(1)PVLEEAPFSR;S(1)PVLEEAPFSR 162.93 0.00063161 24159000 1326.54 1188.61 1179.16 970.71 1254.88 1082.02 1417.62 1169.74 962.56 1308.44 TRUE FALSE 1213.710807 1111.231273 1099.121905 1045.474252 1204.895472 1143.283037 1323.053156 1159.513087 1062.621557 1470.539425 0.825350743 0.755662347 0.747427703 0.710946088 0.819356116 0.77745827 0.899706008 0.78849507 0.722606642 1 10.52212975 -6.709229996 1.999236214 0.832766216 0.760667047 0.187536591 0.075428964 0.632887109 5.205316307 0.029106329 0.027708173 1.95E-07 6.709229996 -0.072099169 S(ph)PVLEEAPFSR ddPTM_A459_MK2206_30min_R2 2 SPVLEEAPFSR 11 0 Q9BZL4-3;K7EL81 Q9BZL4-3 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 S(1)PVLEEAPFSR;S(1)PVLEEAPFSR 124.21 0.0036397 37709000 13659.9 9394.5 11388.5 10526.5 10265.6 11403.5 9630.2 9588.2 7227.7 11091.8 TRUE FALSE 14705.71245 8927.982791 11768.18691 9666.451277 9862.520963 11837.46818 8365.743172 10841.41066 7856.352281 10729.87547 1.370538967 0.832067698 1.096768265 0.900891283 0.919164532 1.103225122 0.779668244 1.010394826 0.732194171 1 13.38934571 -4.753026669 24.99975649 0.935413582 1.370539776 0.551280028 0.119029673 232.0727768 689589.8442 0.027491046 0.309467598 1.77E-05 4.753026669 0.435126195 S(ph)PVPAQIAITVPK ddPTM_A459_MK2206_30min_R1 2 SPVPAQIAITVPK 13 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK 181.51 0.00011519 118134000 10938.6 10937.6 10745.9 8890.2 10437 8371.5 10229.5 9404.9 9452.1 8323.7 TRUE FALSE 10008.21463 10225.56025 10016.49825 9574.924744 10021.27219 8845.487095 9547.10872 9322.673951 10434.67962 9354.902797 1.069836304 1.093069642 1.070721788 1.023519426 1.071232102 0.945545591 1.02054601 0.996554871 1.115423628 1 13.19150695 -5.801169932 1.605556433 1.019865613 1.08388814 0.237788587 0.043098486 0.540961401 2.836147947 0.01387278 0.029097245 1.58E-06 5.801169932 0.064022527 S(ph)PVPAQIAITVPK ddPTM_A459_MK2206_30min_R2 3 SPVPAQIAITVPK 13 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK 132.51 0.0014162 125549400 143344 169729 159087 176949 150288 142095 175069 137806 146882 158381 TRUE FALSE 154318.5269 161300.5047 164390.8812 162491.7007 144386.938 147502.5248 152082.23 155817.7174 159657.5309 153213.0409 1.007215351 1.05278574 1.072956193 1.060560509 0.942393266 0.962728263 0.992619356 1.017000357 1.042062281 1 17.22517957 -6.232508713 24.87480258 0.99213792 1.050449674 0.451136592 0.029992539 664.8069246 571606.3618 0.009699228 0.01251932 5.85E-07 6.232508713 0.058311754 S(ph)PVPQESQER ddPTM_A459_MK2206_30min_R1 1 SPVPQESQER 10 0 Q15776 Q15776 ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 1 S(0.986)PVPQES(0.014)QER 88.177 0.032615 2976800 614.11 488.49 719.83 564.98 515.91 437.77 581.79 597.68 389.16 552.81 TRUE FALSE 561.8767197 456.6892122 670.9699452 608.4948575 495.3602122 462.5561591 542.9798506 592.4545468 429.6145746 621.2962763 0.904361962 0.735058666 1.07995166 0.979395629 0.797301112 0.744501741 0.873946733 0.953578139 0.691481007 1 9.279137597 -6.268502941 24.67423651 0.837722642 0.92223672 0.102782866 0.116737121 1128.598402 3942382.013 0.036419836 0.042179633 5.39E-07 6.268502941 0.084514078 S(ph)PVPSAFSDQSR ddPTM_A459_MK2206_30min_R1 6 SPVPSAFSDQSR 12 0 Q9UQ35;Q9UQ35-2;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PVPSAFSDQSR;S(1)PVPSAFSDQSR;S(1)PVPSAFSDQSR;S(0.999)PVPS(0.001)AFSDQSR;S(0.999)PVPS(0.001)AFSDQSR;S(0.999)PVPS(0.001)AFSDQSR 211.83 4.49E-06 1072285000 5247.9 5561.95 6192.38 4594.3 5066.65 4484.82 5787.21 4610.22 6450.89 7598.61 TRUE FALSE 4801.538547 5199.866044 5772.058499 4948.153782 4864.834602 4738.746633 5401.15578 4569.913333 7121.4831 8539.983173 0.562242155 0.608884811 0.675886402 0.57941025 0.569653886 0.554889458 0.632455085 0.535119712 0.833898962 1 13.06001751 -8.4651266 3.428436494 0.998004581 0.593028712 0.917752031 0.040567787 0.054123688 1.330580715 0.039737858 0.010524531 3.43E-09 8.4651266 -0.404975869 S(ph)PVPSAFSDQSR ddPTM_A459_MK2206_30min_R2 6 SPVPSAFSDQSR 12 0 Q9UQ35;Q9UQ35-2;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.999)PVPS(0.001)AFSDQSR;S(0.999)PVPS(0.001)AFSDQSR;S(0.999)PVPS(0.001)AFSDQSR;S(1)PVPSAFSDQSR;S(1)PVPSAFSDQSR;S(1)PVPSAFSDQSR 167.22 0.00043822 1830456000 201765.4 117190.8 151943.9 156315.7 132480.8 70550.1 156353.2 154913.2 75095.2 162738.1 TRUE FALSE 217212.7142 111371.2753 157009.6338 143544.2073 127278.9381 73234.93349 135823.837 175160.8871 81626.84475 157427.9691 1.379759361 0.707442749 0.997342687 0.911808798 0.808489996 0.465196457 0.862768146 1.112641471 0.518502812 1 17.26433235 -4.754181657 24.99302968 0.822213334 1.37976034 0.419610757 0.197322267 256.7871272 884208.8542 0.048602429 0.486460851 1.76E-05 4.754181657 0.557547006 S(ph)PVPTTLPGLR ddPTM_A459_MK2206_30min_R1 1 SPVPTTLPGLR 11 0 Q63HR2-6;Q63HR2;Q63HR2-4;Q63HR2-5;F8VV64;Q63HR2-2 Q63HR2-6 TNS2 Tensin-2 1 S(1)PVPTTLPGLR 96.756 0.019916 12109000 1534.5 1814.6 1347.9 1163.9 1267.2 1256.8 1501.8 1075.9 1253.7 1547.7 TRUE FALSE 1403.982717 1696.46921 1256.408303 1253.54378 1216.724741 1327.95893 1401.617662 1066.49352 1384.026601 1739.440761 0.807146037 0.975295767 0.722305888 0.720659081 0.69949191 0.763440158 0.805786373 0.61312437 0.795673318 1 10.76440783 -5.276500445 24.75292519 0.748712324 0.891220908 0.181428772 0.102593075 818.5649256 1345314.823 0.024850006 0.052077355 5.29E-06 5.276500445 0.142508584 S(ph)PVPTTLPGLR ddPTM_A459_MK2206_30min_R2 3 SPVPTTLPGLR 11 0 Q63HR2-6;Q63HR2;Q63HR2-4;Q63HR2-5;F8VV64;Q63HR2-2 Q63HR2-6 TNS2 Tensin-2 1 S(1)PVPTTLPGLR;S(1)PVPTTLPGLR;S(0.998)PVPT(0.001)T(0.001)LPGLR 112.94 0.0073852 20218600 44708 44639 46767 49605 45897 36834.1 44648 31856.7 25717.4 41568.3 TRUE FALSE 48130.87885 42422.29217 48326.18844 45552.11282 44094.85317 38235.84749 38785.66397 36020.48007 27954.25297 40211.92978 1.196930342 1.054967827 1.201787348 1.132800964 1.096561478 0.950858307 0.964531277 0.895766015 0.695173127 1 15.29533595 -6.97461987 1.154895103 0.855173567 1.149226622 0.680026944 0.0826238 0.271101376 0.745619473 0.04659904 0.03430418 1.06E-07 6.97461987 0.294053055 S(ph)PVQLEEAPFSR ddPTM_A459_MK2206_30min_R1 4 SPVQLEEAPFSR 12 0 Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 S(1)PVQLEEAPFSR;S(0.879)PVQLEEAPFS(0.121)R;S(1)PVQLEEAPFSR;S(1)PVQLEEAPFSR 143.05 0.00085749 30438700 1102.59 1054.93 937.73 702.79 1099.29 976.18 1174.22 1015.86 779.51 832.61 TRUE FALSE 1008.808931 986.2538653 874.0795003 756.9190076 1055.502952 1031.450468 1095.889926 1006.978443 860.542854 935.7600127 1.078063731 1.053960259 0.934085116 0.808881548 1.1279633 1.102259611 1.171122843 1.07610758 0.919619178 1 9.86999477 S(ph)PVQLEEAPFSR ddPTM_A459_MK2206_30min_R2 4 SPVQLEEAPFSR 12 0 Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 S(1)PVQLEEAPFSR;S(1)PVQLEEAPFSR;S(1)PVQLEEAPFSR;S(1)PVQLEEAPFSR 160.87 0.00047676 39628900 7345.6 7137.6 6021.6 9061.86 4480.7 3549.7 8038.2 3035.2 5046.4 4906.4 TRUE FALSE 7907.984784 6783.157163 6222.357139 8321.477051 4304.765204 3684.786321 6982.774684 3431.911061 5485.32675 4746.30457 1.66613513 1.429144941 1.310989855 1.753253911 0.90697197 0.776348476 1.471202402 0.72307013 1.155704753 1 12.21258897 -6.27127229 24.98078281 1.003525694 1.515621882 0.572472107 0.225821981 507.9138339 1290366.892 0.067883308 0.077912395 5.35E-07 6.27127229 0.512096188 S(ph)PVREPIDNLTPEER ddPTM_A459_MK2206_30min_R1 2 SPVREPIDNLTPEER 15 1 G3XAC6;Q14498-2;Q14498;Q5QP23;H0Y4X3;Q14498-3;Q5QP22 G3XAC6 RBM39 RNA-binding protein 39 1 S(1)PVREPIDNLTPEER;S(1)PVREPIDNLTPEER 101.72 0.0037171 16000600 4104.1 3709 3604.63 3230.4 3381.6 3964.3 3650 3302.08 3201.1 3591.4 TRUE FALSE 3755.024744 3467.543426 3359.957759 3479.205968 3246.903711 4188.75524 3406.51516 3273.210263 3533.8658 4036.329746 0.930306734 0.859083287 0.832428957 0.86197268 0.804419836 1.03776339 0.843963545 0.810937279 0.875514644 1 11.97882832 S(ph)PVREPIDNLTPEER ddPTM_A459_MK2206_30min_R2 3 SPVREPIDNLTPEER 15 1 G3XAC6;Q14498-2;Q14498;Q5QP23;H0Y4X3;Q14498-3;Q5QP22 G3XAC6 RBM39 RNA-binding protein 39 1 S(1)PVREPIDNLTPEER;S(1)PVREPIDNLTPEER;S(1)PVREPIDNLTPEER 90.422 0.0085691 35619800 40418.9 34231.2 40891.6 38601.1 31394.4 32264.9 41772.7 29896.4 35495.6 42971.5 TRUE FALSE 43513.40206 32531.32838 42254.90553 35447.26665 30161.69811 33492.76338 36287.89431 33803.96213 38582.94313 41569.34347 1.046766642 0.782579797 1.016492011 0.85272616 0.725575523 0.805708259 0.872948459 0.813194516 0.928158588 1 15.34323234 -4.746416314 24.82821651 0.858712345 1.046767188 0.268569522 0.088499042 1011.42322 1671450.366 0.021823111 0.494360852 1.79E-05 4.746416314 0.188054844 S(ph)PVSPLAAQGIPLPAQLTK ddPTM_A459_MK2206_30min_R1 2 SPVSPLAAQGIPLPAQLTK 19 0 K7EIF1;K7EPF0;K7EQS3;K7EM48;K7EN63;Q96SI1-2;Q96SI1 K7EIF1 KCTD15 BTB/POZ domain-containing protein KCTD15 1 S(0.998)PVS(0.002)PLAAQGIPLPAQLTK;S(0.995)PVS(0.005)PLAAQGIPLPAQLTK 262.17 1.84E-47 94677000 8106.5 8469.9 7894.2 6810.4 7615.7 7115.2 8517.2 7141.7 7155.5 7123.6 TRUE FALSE 7416.999606 7918.507971 7358.363699 7334.938188 7312.350542 7518.056475 7949.033129 7079.26087 7899.339831 8006.125348 0.926415623 0.989056207 0.919091743 0.916165794 0.913344499 0.939038067 0.992868933 0.884230581 0.986662023 1 12.96688849 -7.02136136 24.47131215 0.957673015 0.933445892 0.14334765 0.036489891 1553.754365 1779958.424 0.013677544 0.010711859 9.52E-08 7.02136136 -0.024227122 S(ph)PVSPLAAQGIPLPAQLTK ddPTM_A459_MK2206_30min_R2 3 SPVSPLAAQGIPLPAQLTK 19 0 K7EIF1;K7EPF0;K7EQS3;K7EM48;K7EN63;Q96SI1-2;Q96SI1 K7EIF1 KCTD15 BTB/POZ domain-containing protein KCTD15 1 S(0.809)PVS(0.191)PLAAQGIPLPAQLTK;S(0.958)PVS(0.042)PLAAQGIPLPAQLTK;S(0.964)PVS(0.036)PLAAQGIPLPAQLTK 211.13 1.29E-16 72941000 142546.7 161035.7 154210.5 179723 165947.8 156223.2 187215 134438.2 135707.1 168876 TRUE FALSE 153460.185 153038.9013 159351.8011 165039.056 159431.8556 162168.3833 162633.4456 152009.7343 147510.6583 163365.59 0.939366638 0.936787859 0.975430635 1.010243687 0.975920667 0.992671611 0.995518369 0.930488081 0.902948156 1 17.31774461 -5.260659666 24.1523157 0.973375216 0.938077244 0.165944755 0.031215605 79.79357957 2471504.178 0.008739174 0.020540457 5.49E-06 5.260659666 -0.035297972 S(ph)PVSSLQIR ddPTM_A459_MK2206_30min_R1 2 SPVSSLQIR 9 0 Q5JT35;P55197-1;P55197 Q5JT35 MLLT10 Protein AF-10 1 S(0.987)PVS(0.005)S(0.008)LQIR;S(0.964)PVS(0.034)S(0.001)LQIR 109.11 0.011621 32977000 519.33 486.95 579.81 545.28 523.05 425.01 621.96 605.66 461.4 420.54 TRUE FALSE 475.1582564 455.2494665 540.4541126 587.2775601 502.2158109 449.0736989 580.4701832 600.3647785 509.3641811 472.6396701 1.005328766 0.963206212 1.143480217 1.242548176 1.06257651 0.950139667 1.228145287 1.270237808 1.077700865 1 8.884596914 -5.263579709 24.69154284 1.131361897 0.984267482 0.22861076 0.099879089 210.4303473 2427631.999 0.027148097 0.061328398 5.45E-06 5.263579709 -0.147094415 S(ph)PVSSLQIR ddPTM_A459_MK2206_30min_R2 3 SPVSSLQIR 9 0 Q5JT35;P55197-1;P55197 Q5JT35 MLLT10 Protein AF-10 1 S(1)PVSSLQIR;S(0.982)PVS(0.002)S(0.016)LQIR;S(0.992)PVS(0.008)SLQIR 140.78 0.0022637 84297000 12458.5 14892.2 11242.4 17303.5 10234.4 11057.8 19322.7 11908.2 7185.6 15016 TRUE FALSE 13412.33234 14152.675 11617.216 15889.7487 9832.546032 11478.61233 16785.60628 13464.64263 7810.590499 14526.02915 0.923330953 0.974297577 0.799751665 1.093881097 0.676891526 0.79020992 1.155553669 0.926932095 0.537696188 1 13.82635276 -6.250429667 24.80134779 0.856727286 0.939130909 0.072185736 0.172673056 2490.295246 5609832.492 0.052270669 0.066813623 5.62E-07 6.250429667 0.082403623 S(ph)PVSTRPLPSASQK ddPTM_A459_MK2206_30min_R1 1 SPVSTRPLPSASQK 14 1 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 S(0.999)PVS(0.001)TRPLPSASQK 111.66 0.018326 725410000 3334.2 3184.7 3345.6 2974.8 3653.1 3700.6 3527 2948 3300.8 2685.4 TRUE FALSE 3050.608781 2977.375451 3118.509993 3203.919611 3507.589291 3910.124774 3291.720265 2922.225947 3643.929972 3018.087626 1.010775418 0.986510606 1.03327351 1.06157276 1.162189348 1.295563701 1.090664246 0.968237609 1.207363875 1 11.55941898 -5.913840331 2.701149025 1.125553315 1.005165819 0.233985626 0.089460438 0.405961247 5.997971573 0.02823086 0.045133293 1.22E-06 5.913840331 -0.120387496 S(ph)PVSTRPLPSASQK ddPTM_A459_MK2206_30min_R2 2 SPVSTRPLPSASQK 14 1 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 S(0.999)PVS(0.001)TRPLPSASQK;S(1)PVSTRPLPSASQK 137.79 0.0027728 811682000 175892 195820 185149 213832 174996 157925 222004 171899 162151 188451 TRUE FALSE 189358.4268 186095.8635 191321.7753 196361.2416 168124.7778 163934.9465 192854.6081 194366.7895 176254.6009 182301.8593 1.038708149 1.02081166 1.049477915 1.077121442 0.922232929 0.899249998 1.057886128 1.06618106 0.966828323 1 17.47596975 -6.237881223 24.99705631 0.988022613 1.04490336 0.259332861 0.050466717 1376.740893 1460830.177 0.016584216 0.02139578 5.78E-07 6.237881223 0.056880747 S(ph)PVTTLLECMHK ddPTM_A459_MK2206_30min_R2 2 SPVTTLLECMHK 12 0 A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-5;P55265-3;P55265-2;P55265;P55265-4 A0A3B3ITG9 ADAR Double-stranded RNA-specific adenosine deaminase 1 S(1)PVTTLLECMHK;S(0.999)PVT(0.001)TLLECMHK 201.3 5.38E-05 8177800 29268.6 20193.5 23073.8 25275 20908.1 17957.3 23951.9 19501.9 16776.4 24672.7 TRUE FALSE 31509.42652 19190.72015 23843.06898 23209.95165 20087.14294 18640.67763 20806.98676 22050.86529 18235.58095 23867.63182 1.320173981 0.804047938 0.998970872 0.972444683 0.841606033 0.781002396 0.871765868 0.923881576 0.764029757 1 14.54276781 -4.755073817 24.99866667 0.883216205 1.320174708 0.711281398 0.083328415 117.4416143 461170.4834 0.020816463 0.191491755 1.76E-05 4.755073817 0.436958503 S(ph)PVVELSK ddPTM_A459_MK2206_30min_R1 2 SPVVELSK 8 0 P25098 P25098 ADRBK1 Beta-adrenergic receptor kinase 1 1 S(1)PVVELSK;S(1)PVVELSK 90.05 0.02881 26386000 5814.7 6182.2 5631.8 4156.5 4819.3 4948.5 6467.4 4551.5 6302.4 8201.4 TRUE FALSE 5320.129231 5779.737656 5249.529107 4476.63435 4627.337076 5228.679794 6035.971546 4511.706715 6957.557033 9217.451349 0.577180072 0.627042925 0.569520674 0.485669431 0.502019148 0.567258735 0.654841704 0.489474427 0.754824384 1 13.17015218 -8.548519232 3.479785321 0.99949118 0.561616587 0.869865909 0.053497805 0.076204367 2.596441817 0.054145135 0.014290455 2.83E-09 8.548519232 -0.437874593 S(ph)PYGGGRPGR ddPTM_A459_MK2206_30min_R1 1 SPYGGGRPGR 10 1 P46781 P46781 RPS9 40S ribosomal protein S9 1 S(1)PYGGGRPGR 73.951 0.035041 2560200 2572.6 2910.9 2526.2 2303.1 2487.4 2191.2 2656.1 2301 1980.8 2182.3 TRUE FALSE 2353.786861 2721.399881 2354.728582 2480.485161 2388.321591 2315.26385 2478.916415 2280.8826 2186.711248 2452.6598 0.959687463 1.109570875 0.960071422 1.011344974 0.973767985 0.943980837 1.010705364 0.929962892 0.891567289 1 11.26013142 -6.193772401 0.813098005 0.948187079 1.029023267 0.208949792 0.049977591 0.972449098 1.363752123 0.02577748 0.047772255 6.40E-07 6.193772401 0.080836188 S(ph)PYQEFTDHLVK ddPTM_A459_MK2206_30min_R1 2 SPYQEFTDHLVK 12 0 P15880;H0YEN5;E9PQD7 P15880 RPS2 40S ribosomal protein S2 1 S(0.859)PY(0.14)QEFT(0.001)DHLVK;S(1)PYQEFTDHLVK 154.81 0.00028589 20023500 4956 4785.7 4510 3617.6 4017.7 4297.1 4909.6 3788.7 5178.1 5733.2 TRUE FALSE 4534.466175 4474.15006 4203.873766 3896.228179 3857.666501 4540.398089 4582.089542 3755.575795 5716.382025 6443.472099 0.703730241 0.694369432 0.652423678 0.604678366 0.598693754 0.704650849 0.711121189 0.582849702 0.887158652 1 12.65362259 -8.434286362 4.029408092 0.997353703 0.658081997 0.864927008 0.046285291 0.070867249 1.993997495 0.04661599 0.012243128 3.68E-09 8.434286362 -0.339271706 S(ph)PYQEFTDHLVK ddPTM_A459_MK2206_30min_R2 4 SPYQEFTDHLVK 12 0 P15880;H0YEN5;E9PQD7 P15880 RPS2 40S ribosomal protein S2 1 S(0.999)PY(0.001)QEFTDHLVK;S(0.991)PY(0.009)QEFTDHLVK;S(0.944)PY(0.055)QEFT(0.001)DHLVK;S(1)PYQEFTDHLVK 144.73 0.00047517 22414900 69600 62056 64755 63617 58388 52615 72058 54835 45040.3 69850 TRUE FALSE 74928.62951 58974.38928 66913.89938 58419.2876 56095.39374 54617.30069 62596.69804 62002.12278 48957.82388 67570.80022 1.108890664 0.872779205 0.990278333 0.864564093 0.830172109 0.808297379 0.92638681 0.917587517 0.724541129 1 16.04411232 -1.543650935 0.988939464 0.869021548 199.9579082 0.407787905 0.080221874 1516.293906 2.291473684 0.024952997 683666.736 0.028598883 1.543650935 199.0888867 S(ph)QAGVSSGAPPGR ddPTM_A459_MK2206_30min_R2 1 SQAGVSSGAPPGR 13 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 S(1)QAGVSSGAPPGR 79.471 0.039018 1916600 3538 4078.9 4364.6 4341.8 3405.6 4053 3358.5 3628.1 3703.4 4227 TRUE FALSE 3808.872 3876.347757 4510.113586 3987.061051 3271.879032 4207.239755 2917.524916 4102.305127 4025.515038 4089.073336 0.93147559 0.947977069 1.102967155 0.975052469 0.800151712 1.028898092 0.71349293 1.00323589 0.984456552 1 11.99755822 -4.757182596 17.98702632 0.946640443 0.931474808 0.001598243 0.107382703 71.30278305 299492.103 0.026751671 0.184155995 1.75E-05 4.757182596 -0.015165635 S(ph)QALEFPDQPDIAEDLK ddPTM_A459_MK2206_30min_R1 1 SQALEFPDQPDIAEDLK 17 0 F5GZ00;Q96RR4-6;Q96RR4-5;Q96RR4-2;Q96RR4-3;Q96RR4-4;Q96RR4-7;Q96RR4 F5GZ00 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 1 S(1)QALEFPDQPDIAEDLK 61.097 0.038036 64736000 3253.9 3022.2 3029.9 2470.1 3679 3105 2895.5 3222.3 2494.6 2211.9 TRUE FALSE 2977.138718 2825.454231 2824.23883 2660.34753 3532.45764 3280.802417 2702.346478 3194.127771 2753.922597 2485.926871 1.197597062 1.136579786 1.136090873 1.07016323 1.420982122 1.319750172 1.087057914 1.284884044 1.107805153 1 11.27956814 -8.530434574 6.312008026 1.000030956 1.204095865 0.28544076 0.103835572 0.169426371 45.77139738 0.10477288 0.027137942 2.95E-09 8.530434574 0.204064909 S(ph)QDDAMVDYFFQR ddPTM_A459_MK2206_30min_R1 2 SQDDAMVDYFFQR 13 0 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4;E9PM68;E9PL65;E9PMX1 Q5T1Z4 PUM1 Pumilio homolog 1 1 S(1)QDDAMVDYFFQR;S(1)QDDAMVDYFFQR 166.9 8.81E-07 3379400 1183.79 1809.92 1481.89 1040.46 1190.94 1062.23 1595.97 1516.64 1705.62 1593.11 TRUE FALSE 1083.102444 1692.093879 1381.303436 1120.596409 1143.502338 1122.372545 1489.505753 1503.380176 1882.925303 1790.476494 0.604924135 0.945052272 0.771472533 0.62586491 0.638658112 0.6268569 0.831904668 0.839653679 1.051633634 1 10.80612786 -7.936602578 1.74439403 1.024946325 0.713555704 0.596135382 0.10083135 0.282882501 1.576204394 0.089668744 0.031074768 1.16E-08 7.936602578 -0.31139062 S(ph)QDKSLLDGEGPQAVGGQDVAFSR ddPTM_A459_MK2206_30min_R2 2 SQDKSLLDGEGPQAVGGQDVAFSR 24 1 A1X283 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B 1 S(0.985)QDKS(0.015)LLDGEGPQAVGGQDVAFSR;S(0.968)QDKS(0.032)LLDGEGPQAVGGQDVAFSR 95.867 0.00024817 4701800 13904.6 21679.8 15129 16736 21218.9 13346 19218.2 14468.8 17954.9 14839.5 TRUE FALSE 14969.14687 20603.21266 15633.39331 15368.61526 20385.73937 13853.89138 16694.82725 16359.92184 19516.58475 14355.28833 1.04276184 1.435235029 1.089033738 1.070589104 1.420085679 0.965072318 1.162974011 1.139644253 1.359539725 1 13.80929469 -6.782421688 24.9946237 1.136519472 1.209332089 0.065473861 0.159811015 890.5973975 1060894.254 0.054873907 0.048443973 1.65E-07 6.782421688 0.072812617 S(ph)QDQDSEVNELSR ddPTM_A459_MK2206_30min_R2 1 SQDQDSEVNELSR 13 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 S(1)QDQDSEVNELSR 126.91 0.0019797 8156200 7237.6 9418.5 10247 11589 7085.2 6761.7 5739.2 4209.2 6946.8 5598.7 TRUE FALSE 7791.716221 8950.790986 10588.62987 10642.14163 6806.999448 7019.021232 4985.636146 4759.356892 7551.020107 5416.014878 1.438643799 1.652652585 1.955059228 1.964939512 1.256828056 1.295975249 0.920535903 0.878756244 1.394202246 1 12.40301599 -6.461743172 3.125424484 1.08421987 1.758012547 0.691828465 0.20619487 0.153124094 2.951154113 0.072841919 0.080587613 3.45E-07 6.461743172 0.673792676 S(ph)QDVAVSPQQQQCSK ddPTM_A459_MK2206_30min_R1 1 SQDVAVSPQQQQCSK 15 0 H3BQ37;H3BPW9;Q96F86;H3BTD6 H3BQ37 EDC3 Enhancer of mRNA-decapping protein 3 1 S(0.593)QDVAVS(0.407)PQQQQCSK 234.36 2.16E-14 43483000 6012.1 6295.5 6628.4 5360.8 7044.4 6493 6921.1 7676.3 6655.7 6087 TRUE FALSE 5500.739324 5885.661806 6178.482676 5773.689745 6763.806631 6860.628049 6459.406047 7609.186918 7347.583833 6841.103515 0.804071933 0.860338072 0.903141235 0.843970528 0.988701109 1.002854004 0.944205278 1.112274782 1.074034886 1 12.74001334 -6.429450874 0.707317199 1.058118096 0.823981034 0.750583951 0.047694088 0.372904786 0.412559623 0.031599397 0.046581833 3.72E-07 6.429450874 -0.234137062 S(ph)QEADVQDWEFR ddPTM_A459_MK2206_30min_R1 2 SQEADVQDWEFR 12 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(1)QEADVQDWEFR;S(1)QEADVQDWEFR 219.03 3.92E-08 72421000 4106.2 3825.2 3915.7 3821.2 4113.6 3491.2 3883.1 3844.5 3572.8 2798.8 TRUE FALSE 3756.946127 3576.178785 3649.913194 4115.509486 3949.746601 3688.868727 3624.065484 3810.887942 3944.205345 3145.536474 1.194373729 1.136905839 1.160346804 1.308364891 1.255667081 1.172731188 1.152129538 1.211522414 1.253905456 1 11.61909038 -6.949818376 24.95828263 1.170646581 1.210049601 0.097434577 0.076078231 356.8386464 177475.4449 0.027377944 0.02414507 1.12E-07 6.949818376 0.03940302 S(ph)QEADVQDWEFR ddPTM_A459_MK2206_30min_R2 4 SQEADVQDWEFR 12 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(1)QEADVQDWEFR;S(1)QEADVQDWEFR;S(1)QEADVQDWEFR;S(1)QEADVQDWEFR 172.57 0.00021929 48670200 42599.5 46778.6 49417.8 56798.5 52377.7 39283.2 56295 46067.8 42104.9 42671.9 TRUE FALSE 45860.95047 44455.64275 51065.36479 52157.88086 50321.08832 40778.1497 48903.39888 52089.01963 45767.10809 41279.5194 1.110985572 1.076941868 1.237062968 1.263529266 1.219032805 0.987854275 1.184689153 1.261861097 1.108712232 1 15.33313855 S(ph)QEDLNEPIKR ddPTM_A459_MK2206_30min_R1 2 SQEDLNEPIKR 11 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(1)QEDLNEPIKR;S(1)QEDLNEPIKR 105.19 0.0060767 49730000 7472.6 7154.9 7075.5 5781 6867.3 6216.4 8453.9 8267.8 9044.5 8909.2 TRUE FALSE 6837.01613 6689.11471 6595.234773 6226.253622 6593.760899 6568.367196 7889.955756 8195.515496 9984.708141 10012.93896 0.682818118 0.668047088 0.658671225 0.621820791 0.658524029 0.65598794 0.787976017 0.818492506 0.997180566 1 13.28957787 -7.890777624 1.210480473 1.011689868 0.65420164 0.95779645 0.027767421 0.083988706 0.221708825 0.024262317 0.00883061 1.29E-08 7.890777624 -0.357488228 S(ph)QEDLNEPIKR ddPTM_A459_MK2206_30min_R2 2 SQEDLNEPIKR 11 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(1)QEDLNEPIKR;S(1)QEDLNEPIKR 69.878 0.034837 19211000 59478 58768 68609 67946 74916 58086 79870 53688 53087 79584 TRUE FALSE 64031.68141 55849.66658 70896.38982 62394.59445 71974.42142 60296.50343 69382.97306 60705.20594 57704.4113 76987.1806 0.831718747 0.725441121 0.92088565 0.810454338 0.934888391 0.783201865 0.901227614 0.788510574 0.749532725 1 16.23233062 -11.82850403 2.39575987 1.920584719 0.829476255 0.3680084 0.067835316 12684772.15 1199254.025 65036015.92 0.01696287 1.48E-12 11.82850403 -1.091108464 S(ph)QEDMNEPLKR ddPTM_A459_MK2206_30min_R1 1 SQEDMNEPLKR 11 1 E3W994;J3KR49;O75122;A0A0U1RQI6;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 S(1)QEDMNEPLKR 85.287 0.018012 8566500 2481.2 2589.9 2303.7 2162.1 2626.8 2388.3 2979.1 3183.9 3018.3 3384.3 TRUE FALSE 2270.160911 2421.297039 2147.331262 2328.625317 2522.168994 2523.523482 2780.369675 3156.063498 3332.063086 3803.572634 0.596849628 0.636584935 0.564556397 0.612220546 0.663105253 0.663461362 0.730988979 0.82976291 0.876035088 1 11.89313944 -7.908645102 0.679138215 0.999270032 0.597856178 0.976029642 0.020724551 0.093120392 0.088071204 0.019909466 0.009535756 1.23E-08 7.908645102 -0.401413854 S(ph)QEDMNEPLKR ddPTM_A459_MK2206_30min_R2 1 SQEDMNEPLKR 11 1 E3W994;J3KR49;O75122;A0A0U1RQI6;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 S(1)QEDMNEPLKR 91.307 0.047771 10848000 40836 49872 47116 37044 42999 39001 52361 32602 30790 49222 TRUE FALSE 43962.43556 47395.429 48686.82392 34017.3867 41310.64321 40485.21038 45485.9378 36863.19334 33468.05854 47615.89017 0.923272366 0.995370008 1.0224911 0.714412491 0.867581034 0.850245795 0.955268034 0.774178393 0.702875835 1 15.53915548 -5.740207255 24.99976612 0.835039888 0.981877085 0.336811629 0.091621692 272.0168045 320283.7478 0.024707377 0.042741546 1.82E-06 5.740207255 0.146837197 S(ph)QEEPKDTFEHDPSESIDEFNK ddPTM_A459_MK2206_30min_R2 2 SQEEPKDTFEHDPSESIDEFNK 22 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.495)QEEPKDT(0.495)FEHDPS(0.009)ES(0.001)IDEFNK;S(0.916)QEEPKDT(0.084)FEHDPSESIDEFNK 86.136 0.00025504 49855000 213870 223820 245740 197002 223590 132868 261070 211870 155132 266180 TRUE FALSE 230244.0516 212705.4243 253932.8489 180906.3064 214810.7332 137924.3848 226791.1954 239562.1365 168625.1009 257494.5684 0.894170518 0.826057907 0.986167788 0.702563582 0.834234036 0.535639978 0.880761085 0.930358019 0.654868574 1 17.97418247 -5.764891971 24.9999225 0.78317788 0.894524648 0.124008546 0.133463973 184.4437605 1335556.619 0.036487969 0.056684047 1.72E-06 5.764891971 0.111346768 S(ph)QEGLRPR ddPTM_A459_MK2206_30min_R1 2 SQEGLRPR 8 1 Q27J81-2 Q27J81-2 INF2 Inverted formin-2 1 S(1)QEGLRPR;S(1)QEGLRPR 89.9 0.015959 182258000 4960.5 5038.6 5255.1 3776.2 4588.7 4673.8 6050.5 4429.2 3272.3 6035.4 TRUE FALSE 4538.583426 4710.586224 4898.398454 4067.043578 4405.922362 4938.426517 5646.882185 4390.475971 3612.467295 6783.110917 0.669100577 0.694458086 0.7221463 0.599583823 0.649543022 0.728047437 0.8324915 0.647265838 0.532567923 1 12.72773137 -6.775999508 21.04794173 0.731304892 0.6678158 0.098475072 0.117327794 115.537541 167013.7293 0.04074672 0.036191513 1.67E-07 6.775999508 -0.063489092 S(ph)QEGLRPR ddPTM_A459_MK2206_30min_R2 2 SQEGLRPR 8 1 Q27J81-2 Q27J81-2 INF2 Inverted formin-2 1 S(1)QEGLRPR;S(1)QEGLRPR 119.34 0.0043597 1351430000 49604 39262 42666 45921 43269 40565 58818 38231 40414 48161 TRUE FALSE 53401.72038 37312.30617 44088.46315 42169.10741 41570.04165 42108.7295 51095.12595 43227.92297 43929.13667 46589.51051 1.146217674 0.800873539 0.946317372 0.905120207 0.892261824 0.903824252 1.096708795 0.927846687 0.942897579 1 15.50771755 S(ph)QEMVHLVNK ddPTM_A459_MK2206_30min_R1 4 SQEMVHLVNK 10 0 H0YE40;H0Y2P0;H0YD13;P16070-8;P16070-5;P16070-7;P16070-3;P16070-6;P16070-4;P16070-17;P16070-16;P16070-10;P16070-11;P16070-13;P16070-14;P16070-12;P16070-18;P16070 H0YE40 CD44 CD44 antigen 1 S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK 111.66 0.0057631 79404200 31319.2 29116 20162.8 19062.1 24140.8 26665.3 38387.8 31712.2 51298.5 61538.4 TRUE FALSE 28655.33758 27220.54311 18794.20531 20530.26624 23179.22082 28175.06624 35827.0199 31434.94358 56631.16265 69162.24158 0.414320544 0.393575201 0.271740835 0.296842118 0.335142706 0.407376418 0.518014152 0.45451019 0.818816183 1 16.07769701 -8.321066337 0.979706438 1.011005376 0.346237184 0.922209782 0.062430353 0.133045325 0.271555729 0.061086497 0.021119623 4.77E-09 8.321066337 -0.664768192 down S(ph)QEMVHLVNK ddPTM_A459_MK2206_30min_R2 5 SQEMVHLVNK 10 0 H0YE40;H0Y2P0;H0YD13;P16070-8;P16070-5;P16070-7;P16070-3;P16070-6;P16070-4;P16070-17;P16070-16;P16070-10;P16070-11;P16070-13;P16070-14;P16070-12;P16070-18;P16070 H0YE40 CD44 CD44 antigen 1 S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK 95.264 0.015182 106174500 512768 177665 269838 243238 179744 262631 457208 226710 364950 421865 TRUE FALSE 552025.9123 168842.4144 278834.2642 223364.6773 172686.3474 272625.6067 397176.0404 256341.7754 396692.6913 408099.5796 1.352674543 0.413728469 0.683250555 0.547328859 0.423147575 0.66803697 0.973233153 0.628135358 0.972048762 1 18.6385617 -8.272459383 21.55627157 0.986025032 0.692577757 0.145912745 0.262902022 228.9039427 447728.2982 0.235082938 0.063896849 5.34E-09 8.272459383 -0.293447275 S(ph)QEQPLLQPK ddPTM_A459_MK2206_30min_R1 1 SQEQPLLQPK 10 0 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 1 S(1)QEQPLLQPK 89.663 0.030526 2796100 2075.3 2338.1 2388.6 1819.2 2223.9 1667 2183.9 1802.1 1999.5 1941.5 TRUE FALSE 1898.784837 2185.889265 2226.468487 1959.315099 2135.317354 1761.384099 2038.216016 1786.34443 2207.35518 2182.027678 0.870192829 1.001769724 1.020366749 0.897933202 0.978593157 0.807223537 0.93409265 0.81866259 1.011607324 1 11.09145369 -6.226338683 2.029984472 0.907305597 0.962798691 0.016621077 0.076277869 0.837652593 6.779381914 0.024841099 0.033110893 5.94E-07 6.226338683 0.055493094 S(ph)QESGYYDR ddPTM_A459_MK2206_30min_R1 1 SQESGYYDR 9 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 S(0.963)QES(0.037)GYYDR 114.24 0.0086507 23752000 912.81 1125.6 884.11 827.37 1164.7 814.13 1111.7 872.94 818.54 982.25 TRUE FALSE 835.1707161 1052.323235 824.0990765 891.0941808 1118.307533 860.225337 1037.540521 865.3079776 903.6301622 1103.938546 0.756537327 0.953244399 0.746508109 0.807195459 1.013016111 0.779232993 0.939853514 0.78383709 0.818551147 1 10.10844415 -12.07480971 2.047487337 3.057180416 0.847553414 0.220718298 0.087612347 3922886.817 179414.6231 37654818.4 0.020808249 8.42E-13 12.07480971 -2.209627002 S(ph)QESGYYDR ddPTM_A459_MK2206_30min_R2 2 SQESGYYDR 9 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 S(0.922)QES(0.078)GYYDR;S(0.941)QES(0.059)GYYDR 98.407 0.019727 98253000 35195 41682 45636 56701 45861 38671 43637 44945 36614 45948 TRUE FALSE 37889.55626 39612.13249 47157.48146 52068.34692 44060.26671 40142.652 37907.40948 50819.46582 39798.61954 44448.72052 0.852433002 0.891187238 1.060941258 1.171425101 0.99126063 0.903122779 0.852834661 1.143327979 0.895382793 1 15.43985427 -5.116948957 5.297603129 1.003828645 0.861635543 0.224527309 0.097924025 0.32753473 12.63986927 0.026340703 0.074641213 7.64E-06 5.116948957 -0.142193102 S(ph)QGGEEEGPLSDK ddPTM_A459_MK2206_30min_R1 4 SQGGEEEGPLSDK 13 0 E9PR76;E9PSH4;Q9H063 E9PR76 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog 1 S(1)QGGEEEGPLSDK;S(1)QGGEEEGPLSDK;S(1)QGGEEEGPLSDK;S(1)QGGEEEGPLSDK 219.85 1.32E-08 28656000 4135.86 5063.93 5843.62 5233.59 5278.69 8228.9 10469.1 11380.3 10247.3 11664.7 TRUE FALSE 3784.083389 4734.267237 5446.971356 5636.682009 5068.428599 8694.813207 9770.725441 11280.80324 11312.54351 13109.8111 0.28864515 0.361123986 0.415488165 0.429959056 0.386613397 0.663229481 0.745298721 0.860485567 0.862906675 1 13.67835928 -7.177802172 0.747821479 0.968517683 0.334070446 0.960127312 0.048278313 0.123551728 0.138615536 0.040089249 0.026891991 6.64E-08 7.177802172 -0.634447237 down S(ph)QGGEEEGPLSDK ddPTM_A459_MK2206_30min_R2 4 SQGGEEEGPLSDK 13 0 E9PR76;E9PSH4;Q9H063 E9PR76 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog 1 S(1)QGGEEEGPLSDK;S(1)QGGEEEGPLSDK;S(1)QGGEEEGPLSDK;S(1)QGGEEEGPLSDK 160.09 0.00036408 65542000 86737.9 102650 103109.4 113958 152910 135587 239278 216255 217591 297254 TRUE FALSE 93378.62031 97552.55027 106547.0159 104647.2669 146905.9851 140746.8583 207860.5112 244520.271 236516.6719 287554.6263 0.3247335 0.339248759 0.370527914 0.363921347 0.51088027 0.48946129 0.722855736 0.850343721 0.822510404 1 18.13347652 -7.364369707 0.681555681 0.980482761 0.323169274 0.970519545 0.040462919 0.1062659 0.097032394 0.034682175 0.021648107 4.32E-08 7.364369707 -0.657313486 down S(ph)QLDSLK ddPTM_A459_MK2206_30min_R2 1 SQLDSLK 7 0 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 S(1)QLDSLK 92.239 0.027284 7410800 35556 41169 37342 39841 40023 32740 44087 24396 32035 34752 TRUE FALSE 38278.1947 39124.60733 38586.96364 36585.86285 38451.49592 33985.94364 38298.32394 27584.64096 34821.34639 33618.04509 1.138620482 1.163797812 1.147805101 1.088280498 1.143775488 1.010943485 1.139219245 0.820530786 1.035793316 1 15.03694821 -7.203217656 1.116018401 0.958303315 1.140035255 0.459695274 0.074203634 0.41211125 1.010850551 0.047058619 0.02812111 6.26E-08 7.203217656 0.18173194 S(ph)QMEEVQDELIHR ddPTM_A459_MK2206_30min_R1 1 SQMEEVQDELIHR 13 0 A0A2R8Y4W2;A0A2R8YE63;Q12929;Q12929-2 A0A2R8Y4W2 EPS8 Epidermal growth factor receptor kinase substrate 8 1 S(1)QMEEVQDELIHR 150.9 0.00031749 988330 334.8 433.49 524.16 333.01 556.64 424.53 432.15 536.05 486.19 388.6 TRUE FALSE 306.3235019 405.2697222 488.5814796 358.6584879 534.4678501 448.5665217 403.322062 531.3633714 536.7311903 436.7427018 0.701382074 0.927937022 1.118694091 0.821212321 1.223759087 1.027072736 0.923477508 1.216650832 1.228941407 1 8.770639785 -4.15182212 0.816877848 1.086301986 3.97E-29 0.44174021 0.127861936 6.003807891 1.485610811 0.046675796 7.5229116 7.05E-05 4.15182212 -1.086301986 S(ph)QMEEVQDELIHR ddPTM_A459_MK2206_30min_R2 2 SQMEEVQDELIHR 13 0 A0A2R8Y4W2;A0A2R8YE63;Q12929;Q12929-2 A0A2R8Y4W2 EPS8 Epidermal growth factor receptor kinase substrate 8 1 S(1)QMEEVQDELIHR;S(1)QMEEVQDELIHR 195.77 1.82E-21 1183100 10077.3 10874.2 11665.1 12003.2 11128.7 11601.8 10780.2 8087.9 11638.4 10730.8 TRUE FALSE 10848.82584 10334.20304 12054.00861 11022.50016 10691.73132 12043.31463 9364.746791 9145.0163 12650.68699 10380.65487 1.04510033 0.995525154 1.161199246 1.061830905 1.029966938 1.160169062 0.90213449 0.880967185 1.218679086 1 13.34160984 -7.260851072 24.99998333 0.990525793 1.07317714 0.120277843 0.098025144 111.5091924 4738713.622 0.038598975 0.028064265 5.48E-08 7.260851072 0.082651347 S(ph)QPCDLDAR ddPTM_A459_MK2206_30min_R2 1 SQPCDLDAR 9 0 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 S(1)QPCDLDAR 96.334 0.021576 9179200 43273 43143 46266 42790 46065 44482 50474 34624 43569 41779 TRUE FALSE 46586.01415 41000.58136 47808.48535 39293.92012 44256.25664 46174.79368 43846.70317 39149.47568 47358.55287 40415.75465 1.152669659 1.014470266 1.182917052 0.972242643 1.095024874 1.142494903 1.084891363 0.968668679 1.171784451 1 15.30263017 -12.13133416 1.777942836 9.42E-05 1.082829465 0.105726821 0.075137397 1158053.4 51724.17701 4675862.361 0.017733016 7.39E-13 12.13133416 1.082735229 S(ph)QPGSSASSSSGVK ddPTM_A459_MK2206_30min_R2 1 SQPGSSASSSSGVK 14 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(1)QPGSSASSSSGVK 95.755 0.019631 0 3888 3586.3 4495.5 2994.2 4087.4 2734 3475.8 3028.5 3557.5 3524.8 TRUE FALSE 4185.668269 3408.209557 4645.377726 2749.564282 3926.908138 2838.044286 3019.423285 3424.335348 3866.92492 3409.786065 1.227545714 0.999537652 1.36236633 0.806374426 1.151658217 0.83232327 0.885516929 1.00426692 1.134066726 1 11.73546551 -5.764909746 24.99972556 0.971516051 1.176788657 0.360436533 0.135363784 100.6555781 725108.7917 0.036547055 0.056758688 1.72E-06 5.764909746 0.205272606 S(ph)QQENPESQPQK ddPTM_A459_MK2206_30min_R2 1 SQQENPESQPQK 12 0 J3KS37;O94762-4;O94762;J3KSV9 J3KS37 RECQL5 ATP-dependent DNA helicase Q5 1 S(1)QQENPESQPQK 175.6 2.44E-08 0 6122.7 11172 9190.5 9589.4 10271 6751 8002.6 6937.7 5333.7 9945.9 TRUE FALSE 6591.45862 10617.21473 9496.906683 8805.915345 9867.708932 7007.914036 6951.849007 7844.481211 5797.615585 9621.366098 0.685085522 1.10350387 0.987064268 0.915245845 1.025603727 0.72836996 0.722542822 0.815318857 0.602577173 1 13.23202604 -6.769061143 24.98845602 0.75901798 0.953073541 0.269766858 0.137941807 201.9294157 662034.8481 0.045448583 0.040836594 1.70E-07 6.769061143 0.194055562 S(ph)QQSVSLSK ddPTM_A459_MK2206_30min_R2 2 SQQSVSLSK 9 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73 Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(1)QQSVSLSK;S(0.999)QQS(0.001)VSLSK 101.72 0.016773 16901900 49321 73403 76526 82968 76944 65090 78453 47610 52032 57873 TRUE FALSE 53097.05368 69757.91376 79077.33865 76189.249 73922.79195 67567.04556 68152.02686 53832.79047 56557.64931 55984.60875 0.948422341 1.246019492 1.412483545 1.360896337 1.320412763 1.20688609 1.217335057 0.96156411 1.01023568 1 15.77274264 -7.691998831 4.391147828 0.988300481 1.260796462 0.491783177 0.118044851 0.182743105 6.769336982 0.06430683 0.0345715 2.03E-08 7.691998831 0.272495981 S(ph)QRYSGAYGASVSDEELK ddPTM_A459_MK2206_30min_R1 1 SQRYSGAYGASVSDEELK 18 1 A0A286YEX5;C9JRZ6;F8WAR4;Q9NX63 A0A286YEX5 CHCHD3 MICOS complex subunit MIC19 1 S(0.725)QRY(0.124)S(0.138)GAY(0.009)GAS(0.004)VSDEELK 87.49 0.032563 14861000 2812.9 2784.3 2704.9 3022.1 2762.8 2136.4 2301.7 3207.3 2381.8 1619.6 TRUE FALSE 2573.648084 2603.041564 2521.298924 3254.862666 2652.751826 2257.361122 2148.157793 3179.258914 2629.396633 1820.248275 1.413899477 1.430047538 1.385140125 1.788142151 1.457357143 1.240139135 1.18014549 1.746607294 1.44452637 1 10.82991953 -6.535070194 24.40704331 1.358805734 1.507023425 0.136270697 0.209990835 437.1489029 875155.573 0.07112881 0.0711809 2.92E-07 6.535070194 0.148217691 S(ph)QRYSGAYGASVSDEELK ddPTM_A459_MK2206_30min_R2 2 SQRYSGAYGASVSDEELK 18 1 A0A286YEX5;C9JRZ6;F8WAR4;Q9NX63 A0A286YEX5 CHCHD3 MICOS complex subunit MIC19 1 S(0.586)QRY(0.212)S(0.201)GAYGASVSDEELK;S(0.888)QRY(0.093)S(0.019)GAYGASVSDEELK 116.9 0.0048931 21008200 45892 64395 58167 48721 78055 60052 74580 41886 65827 64850 TRUE FALSE 49405.5268 61197.23794 60106.25875 44740.33845 74990.16851 62337.32094 64787.55641 47360.64402 71552.51347 62733.94981 0.78754051 0.975504302 0.958113732 0.713175857 1.195368197 0.993677604 1.032735171 0.754944399 1.140570834 1 15.93695878 -6.254036259 24.99908696 1.00666229 0.87404439 0.263305355 0.129815061 992.1159262 3350206.826 0.038376326 0.048553996 5.57E-07 6.254036259 -0.1326179 S(ph)QSAAVTPSSTTSSTR ddPTM_A459_MK2206_30min_R1 4 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 S(0.997)QSAAVT(0.001)PSS(0.001)T(0.001)TSSTR;S(0.999)QS(0.001)AAVTPSSTTSSTR;S(1)QSAAVTPSSTTSSTR;S(0.998)QS(0.002)AAVTPSSTTSSTR 199.09 8.68E-07 16600200 2070.3 2344.56 1826.26 1489.68 2382.34 2033.43 2081.7 1964.36 1563.07 1847.01 TRUE FALSE 1894.210113 2191.928718 1702.298559 1604.415412 2287.446353 2148.561049 1942.833591 1947.185808 1725.55672 2075.831543 0.912506663 1.055928033 0.820056216 0.772902511 1.101942188 1.035036324 0.935930277 0.938026891 0.831260478 1 11.01947366 -4.47008166 15.47015637 0.942516756 0.7157827 0.007966542 0.103126067 6373568.727 53204221.66 0.026775778 43393375.87 3.39E-05 4.47008166 -0.226734056 S(ph)QSAAVTPSSTTSSTR ddPTM_A459_MK2206_30min_R2 4 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 S(1)QSAAVTPSSTTSSTR;S(0.991)QS(0.009)AAVTPSSTTSSTR;S(1)QSAAVTPSSTTSSTR;S(0.997)QS(0.003)AAVTPSSTTSSTR 204.81 1.99E-07 32273500 28571.9 37459.2 28257.8 36245.6 32192.6 32012.5 31967.2 28357.2 26417.2 32538.2 TRUE FALSE 30759.38663 35599.0306 29199.90095 33284.21854 30928.55677 33230.75812 27769.86824 32063.5834 28714.9203 31476.4812 0.977218083 1.130972372 0.92767361 1.057431367 0.982592577 1.055732943 0.882241826 1.018652091 0.912265895 1 14.94198665 -7.238275843 24.92544364 0.954844274 1.022433307 0.220595236 0.063182336 1143.33989 1230308.507 0.022373942 0.017319273 5.78E-08 7.238275843 0.067589033 S(ph)QSFSHQQPSR ddPTM_A459_MK2206_30min_R2 1 SQSFSHQQPSR 11 0 B3KNS5;Q8WVR3-2;Q8WVR3-3;Q8WVR3 B3KNS5 C7orf43 Uncharacterized protein C7orf43 1 S(0.791)QS(0.2)FS(0.008)HQQPSR 71.529 0.041779 15590000 16274 26730 20194 25806 23787 29970 27653 17347 25088 21754 TRUE FALSE 17519.94995 25402.62707 20867.25788 23697.56725 22853.00286 31110.52935 24022.12788 19614.31246 27270.10889 21044.16876 0.832532287 1.207110024 0.991593354 1.126087113 1.085954172 1.478344415 1.141509943 0.932054513 1.295851084 1 14.3611329 -4.75392589 24.88298928 1.141595546 0.832531704 0.268662796 0.152079134 358.0702075 1185743.709 0.037860649 0.387355031 1.76E-05 4.75392589 -0.309063842 S(ph)QSFTHSPSGDPK ddPTM_A459_MK2206_30min_R2 1 SQSFTHSPSGDPK 13 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(0.465)QS(0.313)FT(0.212)HS(0.006)PS(0.003)GDPK 121.92 0.002747 5963400 14350 20810 15556 19973 17552 21909 32095 24965 25127 26674 TRUE FALSE 15448.64703 19776.60566 16074.62928 18341.14201 16862.82029 22742.76235 27880.88795 28228.01122 27312.50104 25803.62956 0.598700543 0.766427282 0.622960008 0.710796982 0.65350575 0.881378424 1.080502566 1.093955063 1.058475164 1 14.65528639 -6.989435201 2.734824412 1.065811049 0.674442915 0.928215488 0.050775506 0.06292702 0.953055439 0.019506228 0.015778214 1.02E-07 6.989435201 -0.391368134 S(ph)QSIEQESQEK ddPTM_A459_MK2206_30min_R2 4 SQSIEQESQEK 11 0 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 S(0.998)QS(0.002)IEQESQEK;S(0.998)QS(0.002)IEQESQEK;S(1)QSIEQESQEK;S(0.976)QS(0.024)IEQESQEK 168.67 0.00046552 52040200 175250 177770 174216 191946 163578 140821 204045 152114 138961 196220 TRUE FALSE 188667.2747 168942.2003 180024.2745 176263.3978 157155.1058 146180.0418 177253.6464 171995.8221 151047.5766 189817.3575 0.993941109 0.890025035 0.948407864 0.92859473 0.827928004 0.770108929 0.93381158 0.906112193 0.795752183 1 17.5342524 -6.137603659 6.389908732 0.865735601 0.938545745 0.193822915 0.067308693 0.392889478 18.86527294 0.019650108 0.025524848 7.28E-07 6.137603659 0.072810143 S(ph)QSIVSSVFSEAWK ddPTM_A459_MK2206_30min_R1 1 SQSIVSSVFSEAWK 14 0 C9K0J5;Q70E73;C9J164;Q70E73-5;Q70E73-2;Q70E73-8;Q70E73-7;Q70E73-4;Q70E73-3;Q70E73-9;Q70E73-6 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 S(0.895)QS(0.105)IVSSVFSEAWK 103.77 0.0066562 6380900 5420 5175.2 4959.1 3577.3 4311.9 3929.1 4422.1 4310.4 4362.3 4635.4 TRUE FALSE 4959.000538 4838.293539 4622.490109 3852.824266 4140.147892 4151.562247 4127.109778 4272.714627 4815.776696 5209.668347 0.951884114 0.928714309 0.887290668 0.739552695 0.794704694 0.796895689 0.792202018 0.820150985 0.924392183 1 12.34697582 -5.528814854 24.59081698 0.82440351 0.932225052 0.230813683 0.071501082 144.267982 597640.246 0.018807428 0.032699678 2.96E-06 5.528814854 0.107821542 S(ph)QSLNIR ddPTM_A459_MK2206_30min_R2 1 SQSLNIR 7 0 O00443;A0A0C4DGF9;O00443-2 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha 1 S(0.5)QS(0.5)LNIR 104.42 0.017999 64921000 197500 195930 181100 240190 179870 212930 227890 137720 158660 171060 TRUE FALSE 212620.7519 186200.4011 187137.7836 220565.7087 172807.4 221033.2004 197967.7693 155720.4769 172459.96 165478.3262 1.284885802 1.125225311 1.130889996 1.332897871 1.044290234 1.335722964 1.196336546 0.941032463 1.042190624 1 17.33628274 -7.750856907 24.4148115 0.993708668 1.204606687 0.534471208 0.090975287 113.1974046 261159.5486 0.041362846 0.023542042 1.77E-08 7.750856907 0.210898019 S(ph)QSLPHSATVTLGGTSDPSTLSSSALSER ddPTM_A459_MK2206_30min_R1 1 SQSLPHSATVTLGGTSDPSTLSSSALSER 29 0 F8WDP1;A0A0A0MRY0;Q8WUA7-3;Q8WUA7-4;Q8WUA7 F8WDP1 TBC1D22A TBC1 domain family member 22A 1 S(0.26)QS(0.23)LPHS(0.23)AT(0.23)VT(0.05)LGGTSDPSTLSSSALSER 51.568 0.012369 5104300 494.93 324.33 474.69 524.99 568.91 517.83 551.41 593.26 480.59 337.11 TRUE FALSE 452.8336045 303.2160581 442.4693654 565.4248208 546.24911 547.1490871 514.626445 588.0731904 530.5490503 378.8737319 1.195209819 0.800309002 1.167854428 1.492383275 1.44177087 1.444146271 1.358305952 1.552161422 1.400332105 1 8.565573308 -5.5662725 4.74011052 1.409055732 0.992462311 0.464537466 0.1670094 0.135486123 6.847740416 0.042171946 0.077464552 2.71E-06 5.5662725 -0.416593421 S(ph)QSLPTTLLSPVR ddPTM_A459_MK2206_30min_R2 5 SQSLPTTLLSPVR 13 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 S(0.999)QS(0.001)LPTTLLSPVR;S(0.99)QS(0.004)LPT(0.003)T(0.003)LLSPVR;S(0.999)QS(0.001)LPTTLLSPVR;S(0.843)QS(0.054)LPT(0.051)T(0.051)LLSPVR;S(0.83)QS(0.011)LPT(0.054)T(0.096)LLS(0.009)PVR 165.86 0.00034704 57736200 43115.8 68084 58945.8 66613.2 53151.5 55005.1 47921.3 45568 52669.7 48321.6 TRUE FALSE 46416.7788 64703.04756 60911.02355 61170.68847 51064.50505 57098.35762 41629.17575 51523.89406 57250.8153 46744.87015 0.992981233 1.384174292 1.303052578 1.308607517 1.092408747 1.221489277 0.890561373 1.102236329 1.224750761 1 15.51252043 -6.560439565 1.870341186 1.07414381 1.257886624 0.238938145 0.133489078 0.471475287 3.348051252 0.050552454 0.053482163 2.75E-07 6.560439565 0.183742814 S(ph)QSPAASDCSSSSSSASLPSSGR ddPTM_A459_MK2206_30min_R1 1 SQSPAASDCSSSSSSASLPSSGR 23 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.836)QS(0.164)PAASDCSSSSSSASLPSSGR 269.14 8.26E-66 207870000 3354.6 2648.4 3287.4 3047.1 3463.1 2882.9 3636.3 3525 2650.1 2662.6 TRUE FALSE 3069.273654 2475.988679 3064.260447 3281.78817 3325.157394 3046.127307 3393.729062 3494.181297 2925.587378 2992.46299 1.025668042 0.827408288 1.023992764 1.096684631 1.11117745 1.01793316 1.134092242 1.167660656 0.977651984 1 11.54711769 -5.489166065 6.725711019 1.07977167 0.925346854 0.385623371 0.072277392 0.176310747 25.62280145 0.018188274 0.0368435 3.24E-06 5.489166065 -0.154424815 S(ph)QSPHYFR ddPTM_A459_MK2206_30min_R2 1 SQSPHYFR 8 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 S(0.952)QS(0.046)PHY(0.001)FR 91.636 0.026587 32946000 33979 54452 42882 52210 49127 48689 58607 36901 38610 46675 TRUE FALSE 36580.45837 51747.99286 44311.66448 47944.27599 47198.02714 50541.89401 50911.8305 41724.0874 41968.22801 45151.99857 0.810162551 1.146084215 0.981388773 1.061841724 1.045314241 1.119372245 1.127565382 0.924080633 0.929487716 1 15.46250223 -7.784466603 24.99443019 0.945088074 1.047276502 0.164116003 0.092675404 387.294265 420374.5636 0.048515239 0.023329847 1.64E-08 7.784466603 0.102188428 S(ph)QSSDLLER ddPTM_A459_MK2206_30min_R2 3 SQSSDLLER 9 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 S(0.724)QS(0.253)S(0.023)DLLER;S(1)QSSDLLER;S(1)QSSDLLER 123.26 0.0056849 26429000 99081 125736 112430 121621 98220 89733 102958 76059 91690 83440.3 TRUE FALSE 106666.7175 119492.1331 116178.3601 111684.1753 94363.38928 93147.85219 89439.49093 86000.17245 99665.03046 80717.64984 1.321479475 1.480371806 1.439317923 1.383640077 1.169055212 1.153996089 1.108053704 1.065444455 1.234736525 1 16.30059655 -6.292218131 2.518430777 1.117088242 1.422355244 0.812342689 0.067461841 0.116287365 1.455700631 0.021495982 0.026654866 5.10E-07 6.292218131 0.305267002 S(ph)QSSDTEQQS(ph)PTSGGGK ddPTM_A459_MK2206_30min_R2 1 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.883)QS(0.099)S(0.018)DT(0.001)EQQS(0.91)PT(0.082)S(0.007)GGGK 216.32 1.92E-10 12836000 28200 30425 29315 32547 33520 25393 37934 28676 25981 30197 TRUE FALSE 30359.01368 28914.13874 30292.34747 29887.80599 32203.83638 26359.34841 32953.22023 32424.05166 28240.78042 29211.67436 1.039276739 0.989814496 1.036994562 1.023145939 1.102430349 0.902356643 1.128083924 1.109968955 0.966763496 1 14.83425743 S(ph)QSSDTEQQSPTSGGGK ddPTM_A459_MK2206_30min_R2 1 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.824)QS(0.164)S(0.012)DTEQQSPTSGGGK 117.78 0.0015698 3340500 22707 22090 22064 23285 25104 20761 26352 21038 23245 21679 TRUE FALSE 24445.46538 20993.04272 22799.60275 21382.54101 24118.29082 21551.0744 22891.95075 23787.73883 25266.80808 20971.61601 1.165645288 1.001021701 1.087164801 1.019594342 1.150044461 1.027630603 1.091568277 1.134282586 1.204809781 1 14.35615041 -7.607541519 4.90166851 1.126378223 1.072231925 0.045762923 0.068596234 0.46358593 19.48388101 0.031406556 0.017652517 2.47E-08 7.607541519 -0.054146299 S(ph)QSSGSSATHPISVPGAR ddPTM_A459_MK2206_30min_R1 2 SQSSGSSATHPISVPGAR 18 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(0.962)QS(0.029)S(0.008)GS(0.001)SATHPISVPGAR;S(0.987)QS(0.009)S(0.002)GS(0.001)SATHPISVPGAR 104.16 0.0018821 9985600 2151.7 2467.3 2495.27 1723.04 2437.6 2575.6 2557.6 2071.14 1993.15 1897.67 TRUE FALSE 1968.686616 2306.678322 2325.898025 1855.748839 2340.50523 2721.428246 2386.987171 2053.032241 2200.345075 2132.767686 0.9230666 1.081542231 1.090553856 0.870112976 1.0974028 1.27600782 1.119196988 0.962614097 1.031685302 1 11.05851111 -4.75663078 24.66790789 1.062601152 0.923066348 0.137678098 0.101499052 279.496538 1433603.229 0.027162329 0.215653039 1.75E-05 4.75663078 -0.139534804 S(ph)QSSGSSATHPISVPGAR ddPTM_A459_MK2206_30min_R2 2 SQSSGSSATHPISVPGAR 18 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(0.993)QS(0.006)SGSSATHPISVPGAR;S(0.999)QS(0.001)SGSSATHPISVPGAR 203.23 8.81E-11 11622100 15265.6 25824 24965.1 29212.8 28456 33003 37259 21148.6 29282.6 23654.3 TRUE FALSE 16434.34607 24541.61771 25797.42397 26826.02079 27338.67446 34258.95229 32366.84854 23912.79463 31829.54762 22882.46213 0.71820707 1.072507739 1.12738847 1.172339788 1.194743569 1.49717072 1.414482776 1.04502717 1.39100187 1 14.48195467 -4.344539815 0.879105806 1.268626961 1.39E-17 0.523160084 0.150621857 3.47943463 1.236557424 0.052387732 5.098850507 4.52E-05 4.344539815 -1.268626961 S(ph)QSSSNCSNPISVPLR ddPTM_A459_MK2206_30min_R1 1 SQSSSNCSNPISVPLR 16 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.976)QS(0.022)S(0.002)SNCSNPISVPLR 129.05 0.00090241 3903600 1981.8 1674.8 1346.6 1636.2 2108.5 2266.2 2190.1 1644.2 1864.7 2478.1 TRUE FALSE 1813.237503 1565.770216 1255.196544 1762.220408 2024.51398 2394.510286 2044.002425 1629.824933 2058.542238 2785.105737 0.651047994 0.562194173 0.450681828 0.632730163 0.726907404 0.859755611 0.733904784 0.585193198 0.739125345 1 11.44351639 -6.155479516 3.220810717 0.756793812 0.554388464 0.445742455 0.11038391 0.262177447 5.164440706 0.034447326 0.045918917 6.99E-07 6.155479516 -0.202405348 S(ph)QSSSNCSNPISVPLR ddPTM_A459_MK2206_30min_R2 4 SQSSSNCSNPISVPLR 16 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.971)QS(0.024)S(0.003)S(0.001)NCS(0.001)NPISVPLR;S(0.998)QS(0.002)SSNCSNPISVPLR;S(0.987)QS(0.002)S(0.01)S(0.001)NCSNPISVPLR;S(0.956)QS(0.014)S(0.025)S(0.005)NCSNPISVPLR 208.85 5.94E-08 26752500 30884.4 34573.2 23907 33425.3 29155.3 33843.1 38156.4 32372.1 32630.3 41775.4 TRUE FALSE 33248.93341 32856.34516 24704.04745 30694.34607 28010.51643 35131.02289 33146.41885 36603.24462 35468.42451 40412.27212 0.82274348 0.8130289 0.611300631 0.759530322 0.693119069 0.869315706 0.820206762 0.905745772 0.877664696 1 15.30250585 -7.766100719 0.714066803 0.978574813 0.738815699 0.588833725 0.066884689 0.488720774 0.485241748 0.063928391 0.03113033 1.71E-08 7.766100719 -0.239759114 S(ph)QSSSNCSNPISVPLRR ddPTM_A459_MK2206_30min_R2 1 SQSSSNCSNPISVPLRR 17 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.814)QS(0.166)S(0.013)S(0.006)NCSNPIS(0.001)VPLRR 110.77 0.0037655 4919500 9411.1 9003.9 8799.7 9310.2 10780 12484 11645 10002 12304 7419.5 TRUE FALSE 10131.62105 8556.779419 9093.077606 8549.526878 10356.72303 12959.08737 10115.99751 11309.29574 13374.17968 7177.402323 1.411599991 1.192183332 1.266903707 1.191172864 1.442962589 1.805540053 1.409423223 1.575680899 1.863373276 1 12.80924608 -6.486604696 6.278918353 1.566276268 1.265447033 0.223588843 0.22877449 0.256338845 30.11921352 0.06835778 0.075622499 3.26E-07 6.486604696 -0.300829235 S(ph)QSSSQFR ddPTM_A459_MK2206_30min_R1 1 SQSSSQFR 8 0 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 S(0.604)QS(0.355)S(0.03)S(0.011)QFR 112.85 0.010999 14557000 2583.8 2529.1 2313.2 2144 2336 2114 2756.8 2026.4 660.05 1756.2 TRUE FALSE 2364.034242 2364.45513 2156.186429 2309.131251 2242.952173 2233.692853 2572.898902 2008.683398 728.6645595 1973.771315 1.19772449 1.197937731 1.092419579 1.169908203 1.13637895 1.131687768 1.303544581 1.017688009 0.369173751 1 10.94673913 -8.039203915 8.670827278 0.685638711 1.169368928 0.624099696 0.150681797 0.213657618 44.13732597 0.09015914 0.034747808 9.14E-09 8.039203915 0.483730217 S(ph)QSTTFNPDDMSEPEFKR ddPTM_A459_MK2206_30min_R1 1 SQSTTFNPDDMSEPEFKR 18 1 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.56)QS(0.382)T(0.057)T(0.001)FNPDDMSEPEFKR 189.98 1.15E-10 26947000 2165.8 1945.8 2083.2 2019.4 1867.9 1592.4 1955.5 2269.4 1709.6 1327.7 TRUE FALSE 1981.587337 1819.128066 1941.798188 2174.934538 1793.497588 1682.560312 1825.052163 2249.558875 1887.319038 1492.1855 1.32797654 1.219103166 1.301311525 1.457549707 1.201926696 1.127581197 1.223073246 1.507559801 1.264801888 1 10.54321118 S(ph)QSTTFNPDDMSEPEFKR ddPTM_A459_MK2206_30min_R2 1 SQSTTFNPDDMSEPEFKR 18 1 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.532)QS(0.391)T(0.072)T(0.005)FNPDDMSEPEFKR 131.86 0.000263 18960000 28695 58760 50502 49573 47538 47881 54013 40300 68489 51149 TRUE FALSE 30891.91126 55842.06385 52185.71147 45522.72732 45671.41926 49703.14501 46921.02822 45567.34837 74446.04942 49480.01232 0.624331115 1.128578212 1.054682669 0.920022554 0.923027645 1.004509552 0.948282468 0.920924354 1.504568126 1 15.59455824 -8.228502728 24.88465851 1.252284239 0.951739262 0.35398502 0.167909653 547.2790074 413487.4911 0.105303663 0.03979511 5.91E-09 8.228502728 -0.300544977 S(ph)QSYIPTSGCR ddPTM_A459_MK2206_30min_R2 2 SQSYIPTSGCR 11 0 A0A087WZ32;A0A087X038;A8K727;Q9HB19;E5RHB5 A0A087WZ32 PLEKHA2 Pleckstrin homology domain-containing family A member 2 1 S(0.916)QS(0.028)Y(0.002)IPT(0.043)S(0.011)GCR;S(0.642)QS(0.274)YIPT(0.083)S(0.001)GCR 120.6 0.0046828 38885000 104668 127382 123944 135243 171284 128081 148172 116634 110760 125626 TRUE FALSE 112681.4626 121056.3951 128076.2311 124193.2143 164558.5295 132955.2122 128716.8384 131878.4643 120393.7046 121526.8339 0.927214665 0.996128931 1.053892601 1.021940672 1.354092131 1.094039958 1.059163925 1.085179791 0.990675892 1 16.89091538 -5.192388027 1.548942642 1.098811924 0.924352358 0.215121672 0.096990712 0.853472344 3.182114596 0.029786541 0.178321897 6.42E-06 5.192388027 -0.174459565 S(ph)QTLPIIR ddPTM_A459_MK2206_30min_R1 2 SQTLPIIR 8 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 S(0.547)QT(0.453)LPIIR;S(0.7)QT(0.3)LPIIR 99.568 0.018546 42832700 6008 5734.4 5799 4800.2 6482.8 4972.5 5553.1 5460.8 4447.5 4645.6 TRUE FALSE 5496.988051 5361.089518 5405.380037 5169.912236 6224.576348 5254.038653 5182.662831 5413.056801 4909.833541 5221.132 1.052834529 1.026805972 1.035288906 0.990189912 1.19218904 1.00630259 0.992632025 1.036759232 0.940377209 1 12.35014692 -6.972155035 24.99999226 0.996071213 1.057135058 0.264361146 0.053778651 325.5604907 292296.3812 0.01895788 0.016718975 1.07E-07 6.972155035 0.061063845 S(ph)QTLPIIR ddPTM_A459_MK2206_30min_R2 2 SQTLPIIR 8 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 S(0.831)QT(0.169)LPIIR;S(0.5)QT(0.5)LPIIR 100.69 0.017641 24608000 51271 64168 61520 47651 49811 50344 51027 38774 52941 46010 TRUE FALSE 55196.34718 60981.51043 63571.0461 43757.76087 47855.16986 52259.8762 44327.09361 43841.89493 57545.71248 44508.69747 1.240124972 1.370103236 1.428283677 0.983128318 1.075186932 1.174149754 0.995919812 0.985018601 1.292909381 1 15.44179966 -5.760174009 24.9998134 1.072883887 1.348563915 0.601626376 0.102108514 22.11782254 436959.5857 0.027798726 0.044949472 1.74E-06 5.760174009 0.275680028 S(ph)QVIAEK ddPTM_A459_MK2206_30min_R2 1 SQVIAEK 7 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 S(1)QVIAEK 87.184 0.033924 18956000 108030 115460 100420 118380 111210 117820 111450 85830 80554 94683 TRUE FALSE 116300.8599 109726.4243 103767.9527 108707.9753 106843.3366 122303.7227 96816.48112 97048.2757 87560.44131 91593.50146 1.269750124 1.197971718 1.132918286 1.18685249 1.166494728 1.33528821 1.057023474 1.059554162 0.955967835 1 16.48295762 -7.444205355 6.638398819 1.015554045 1.206914926 0.735794815 0.058144224 0.135834813 9.564998868 0.02519413 0.016778112 3.60E-08 7.444205355 0.191360881 S(ph)QVIEKFEALDIEK ddPTM_A459_MK2206_30min_R1 1 SQVIEKFEALDIEK 14 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)QVIEKFEALDIEK 73.252 0.027228 7052200 1222.6 1463.2 1779.3 1869.6 1481.5 1519.3 1305.5 1503.4 873.42 573.4 TRUE FALSE 1118.61145 1367.945414 1658.526073 2013.596916 1422.488718 1605.321453 1218.412477 1490.255932 964.2151346 644.4371209 1.735796113 2.122698041 2.573604188 3.124582446 2.207335164 2.491044356 1.890661536 2.312492381 1.496212901 1 9.331895789 -8.446838625 1.069248057 0.985421975 2.380218922 0.582900928 0.367329908 0.383107934 0.958143468 0.367345409 0.120438362 3.57E-09 8.446838625 1.394796947 S(ph)QVIEKFEALDIEK ddPTM_A459_MK2206_30min_R2 1 SQVIEKFEALDIEK 14 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)QVIEKFEALDIEK 98.421 0.0057224 2368700 5213.1 11335 9167.2 11096 12428 8698.6 8865.4 7011.4 8505.1 6758.2 TRUE FALSE 5612.218944 10772.12038 9472.829873 10189.42131 11940.01427 9029.631318 7701.362331 7927.814054 9244.858224 6537.680487 0.858441913 1.64769759 1.44895883 1.558568261 1.826337995 1.381167424 1.177996133 1.212634063 1.414088413 1 12.67456316 -7.005347849 24.94911774 1.227568068 1.494137179 0.194446046 0.251693577 385.1521722 1796842.459 0.089504625 0.076650799 9.88E-08 7.005347849 0.26656911 S(ph)QVMNVIGSER ddPTM_A459_MK2206_30min_R2 2 SQVMNVIGSER 11 0 A0A096LNH6;Q14185 A0A096LNH6 DOCK1 Dedicator of cytokinesis protein 1 1 S(1)QVMNVIGSER;S(1)QVMNVIGSER 109.44 0.0093939 7880700 6956.1 15709 11789.5 10578.8 11884.3 10328.8 12248.3 11292.1 9987.9 10573.2 TRUE FALSE 7488.664364 14928.9139 12182.55605 9714.4782 11417.66267 10721.86972 10640.0835 12768.01624 10856.62949 10228.19735 0.732158767 1.459584069 1.191075576 0.949774224 1.116292762 1.048265824 1.040269671 1.248315398 1.061441143 1 13.32026428 -8.527801577 23.49729313 0.999999971 1.108507106 0.025004321 0.180221841 996.896754 4758330.186 0.166339342 0.042948633 2.97E-09 8.527801577 0.108507135 S(ph)QVNGEAGSYEMTNQHVK ddPTM_A459_MK2206_30min_R2 2 SQVNGEAGSYEMTNQHVK 18 0 Q05D32;H0YMH7;Q05D32-2 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 S(1)QVNGEAGSYEMTNQHVK;S(1)QVNGEAGSYEMTNQHVK 115.77 0.00069819 19925400 44499 54596 48434 51262 45455 43734 59960 44499 43018 56378 TRUE FALSE 47905.87765 51884.84203 50048.76539 47073.73062 43670.20831 45398.32802 52087.17998 50315.17209 46759.62788 54538.39048 0.878388182 0.951345311 0.917679546 0.863130177 0.800724186 0.832410484 0.95505532 0.922564301 0.857370881 1 15.7349845 -10.39422448 6.900753048 1.000000002 0.887615132 0.335523773 0.047887349 1.47E-09 2.76E-10 0.051196098 0.012416877 4.03E-11 10.39422448 -0.11238487 S(ph)RADLTAEMISAPLGDFR ddPTM_A459_MK2206_30min_R1 2 SRADLTAEMISAPLGDFR 18 1 Q9H3Q1;Q9H3Q1-2;J3KRZ9;J3QQS6;J3QR93 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 S(0.997)RADLT(0.003)AEMISAPLGDFR;S(0.996)RADLT(0.004)AEMISAPLGDFR 139.55 0.00017898 9459000 3056.12 3572.08 3506.07 2970.43 3587.31 3642.54 3501.03 3673.87 3168.15 2880.53 TRUE FALSE 2796.180946 3339.536943 3268.087737 3199.213033 3444.419846 3848.777467 3267.482677 3641.749742 3497.49053 3237.391803 0.863714099 1.031551677 1.009481686 0.988206936 1.063949023 1.188851304 1.009294789 1.124902379 1.08034206 1 11.66061626 -3.44945676 0.623724748 1.079931203 3.58E-14 0.492613486 0.059045915 13.36228235 1.082717376 0.026173907 15.00106989 0.000355257 3.44945676 -1.079931203 S(ph)RADLTAEMISAPLGDFR ddPTM_A459_MK2206_30min_R2 3 SRADLTAEMISAPLGDFR 18 1 Q9H3Q1;Q9H3Q1-2;J3KRZ9;J3QQS6;J3QR93 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 S(0.991)RADLT(0.009)AEMISAPLGDFR;S(0.853)RADLT(0.144)AEMIS(0.004)APLGDFR;S(0.985)RADLT(0.015)AEMISAPLGDFR 111.73 0.00070739 2526300 14672.6 15531.9 15311.3 13504.1 14767.4 14815.2 17306.6 12149.7 13273.1 14520.4 TRUE FALSE 15795.94554 14760.60843 15821.7711 12400.77183 14187.55768 15379.00282 15034.22263 13737.70751 14427.57025 14046.60054 1.124538674 1.050831366 1.126377237 0.882830817 1.010034965 1.094855853 1.070310399 0.97800941 1.027121844 1 13.7779334 S(ph)RASPVSR ddPTM_A459_MK2206_30min_R2 2 SRASPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.996)RAS(0.004)PVSR;S(0.999)RAS(0.001)PVSR 66.92 0.044466 140515000 6140.8 2257.6 3668.84 4235.63 5779.51 3990.97 4279.02 12844.4 10530.7 4362.18 TRUE FALSE 6610.944369 2145.490867 3791.157294 3889.56548 5552.577398 4142.84916 3717.179534 14523.20718 11446.64125 4219.842424 1.566632994 0.508429143 0.898412053 0.921732399 1.315825768 0.981754469 0.880881123 3.441646802 2.712575519 1 12.04297341 -7.74268375 24.9954122 2.557833377 0.99412112 0.496639098 0.626614339 156.9570634 209175.3854 0.278656896 0.160531312 1.81E-08 7.74268375 -1.563712257 S(ph)RDATPPVSPINMEDQER ddPTM_A459_MK2206_30min_R2 1 SRDATPPVSPINMEDQER 18 1 P17275 P17275 JUNB Transcription factor jun-B 1 S(0.5)RDAT(0.5)PPVSPINMEDQER 83.948 0.0045842 5466100 2314.9 1190.6 1257.6 1570 2754.2 1655.4 4794 1528 2199.8 2598.6 TRUE FALSE 2492.130524 1131.476535 1299.527756 1441.725978 2646.056269 1718.397407 4164.542041 1727.714846 2391.134628 2513.807895 0.99137668 0.450104615 0.516955874 0.573522734 1.052608783 0.683583424 1.656666784 0.687289928 0.951200222 1 11.29565869 -6.260692451 24.79595614 1.006079385 0.611638573 0.288698077 0.285450503 75.86219292 2518412.346 0.084757795 0.103041233 5.49E-07 6.260692451 -0.394440813 S(ph)RDFNEECPR ddPTM_A459_MK2206_30min_R1 2 SRDFNEECPR 10 1 A0A0A0MTH3;Q13418-3;Q13418-2;Q13418 A0A0A0MTH3 ILK Integrin-linked protein kinase 1 S(1)RDFNEECPR;S(1)RDFNEECPR 153.54 0.0028092 7695800 2734.5 2611.6 3032.2 2776.9 2994.5 2968.5 3097.3 2880 2302.9 2378.9 TRUE FALSE 2501.916416 2441.584365 2826.382712 2990.777319 2875.222724 3136.573905 2890.684768 2854.820464 2542.294696 2673.616092 0.935779981 0.913214269 1.057138578 1.118626316 1.075405977 1.173157924 1.081189172 1.067775015 0.950882479 1 11.38457661 -5.301890757 5.171608793 1.075473384 0.923747942 0.484845238 0.057569428 0.14315283 9.806727098 0.015513894 0.034827214 4.99E-06 5.301890757 -0.151725443 S(ph)REDLSAQPVQTK ddPTM_A459_MK2206_30min_R1 4 SREDLSAQPVQTK 13 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.993)REDLS(0.007)AQPVQTK;S(1)REDLSAQPVQTK;S(0.94)REDLS(0.06)AQPVQTK;S(1)REDLSAQPVQTK 136.36 0.00060392 362795700 23005.2 23068.5 20748.7 18387.2 19519.3 20134.4 21033.3 18744.6 19135.5 17247 TRUE FALSE 21048.48693 21566.73646 19340.33605 19803.38533 18741.80495 21274.39233 19630.20693 18580.71794 21124.7037 19383.68857 1.085886562 1.112622935 0.997763454 1.021652059 0.966885373 1.097540969 1.012717825 0.958574931 1.089818567 1 14.24255551 -5.25869014 24.99454531 1.017579667 1.099254755 0.359480025 0.043316401 239.5015873 2177384.123 0.010781701 0.02598201 5.51E-06 5.25869014 0.081675088 S(ph)REDLSAQPVQTK ddPTM_A459_MK2206_30min_R2 4 SREDLSAQPVQTK 13 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.735)REDLS(0.264)AQPVQTK;S(0.997)REDLS(0.003)AQPVQTK;S(0.994)REDLS(0.006)AQPVQTK;S(0.762)REDLS(0.238)AQPVQTK 126.77 0.0037553 205348700 226919 231212 206924 258865 239784 222519 295483 223428 226218 224806 TRUE FALSE 244292.0931 219730.3483 213822.7429 237714.9014 230368.8753 230987.1165 256685.7272 252630.8067 245894.0327 217470.5986 1.123333888 1.010391058 0.983225982 1.093089838 1.059310439 1.062153311 1.180323817 1.161677985 1.130700124 1 17.73046084 -7.119693156 6.642476106 1.131391411 1.05078404 0.205971579 0.058235676 0.311986843 15.78214537 0.021913566 0.016958897 7.59E-08 7.119693156 -0.08060737 S(ph)RENLSAVMLYNPGLEFER ddPTM_A459_MK2206_30min_R1 1 SRENLSAVMLYNPGLEFER 19 1 A0A1B0GTU3;Q96L93-5;Q96L93-6;Q96L93-4;Q96L93;Q96L93-2 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 1 S(0.992)RENLS(0.008)AVMLYNPGLEFER 71.002 0.0082887 3482200 1457.6 1412.6 1714.1 1286.9 1017 1230.2 1368.8 1494.8 1203.4 1184 TRUE FALSE 1333.623466 1320.639483 1597.751668 1386.017261 976.4907365 1299.852861 1277.48985 1481.731121 1328.497736 1330.682859 1.002209848 0.992452465 1.200700571 1.041583464 0.733826794 0.976831446 0.96002578 1.113511842 0.998357894 1 10.37795106 -6.018809519 24.98879247 0.962429123 1.068402119 0.17396565 0.102787796 1371.653677 1822267.718 0.032071672 0.042150543 9.58E-07 6.018809519 0.105972996 S(ph)RESASPTIPNLDLLEAHTK ddPTM_A459_MK2206_30min_R2 1 SRESASPTIPNLDLLEAHTK 20 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 S(0.763)RES(0.177)AS(0.045)PT(0.016)IPNLDLLEAHTK 76.799 0.0023716 2405800 10799 18249 13975 18904 18516 18922 22429 13502 16167 14735 TRUE FALSE 11625.77974 17342.7812 14440.91953 17359.48273 17788.9688 19642.08997 19484.04536 15266.75776 17573.17644 14254.19816 0.815603909 1.216678834 1.013099395 1.217850526 1.247981023 1.377986313 1.36689873 1.071035887 1.232842159 1 13.79909926 -4.760298492 24.86086863 1.2039991 0.815603416 0.450868621 0.124765527 25.02845645 545133.4837 0.032031441 0.191290009 1.74E-05 4.760298492 -0.388395684 S(ph)RESLNVDVVK ddPTM_A459_MK2206_30min_R1 4 SRESLNVDVVK 11 1 Q07866-6;Q07866-4;Q07866-7;G3V5R9;Q07866-9;H0YG16;G3V3H3;Q07866-3;G3V2E7;Q07866-10;Q07866-5;Q07866;Q07866-2;Q07866-8;G5E9S8;F8W6L3;E7EVH7;H0YJT3;H0YJL0;H0YJU9;H0YGB8 Q07866-6 KLC1 Kinesin light chain 1 1 S(0.996)RES(0.004)LNVDVVK;S(0.95)RES(0.05)LNVDVVK;S(0.992)RES(0.008)LNVDVVK;S(0.984)RES(0.016)LNVDVVK 136.14 0.00079205 100755500 20001.4 22126.4 22546.9 18414.5 19926.6 18730.2 19963.6 19947.9 20455.4 19436.9 TRUE FALSE 18300.1759 20685.96734 21016.47925 19832.78798 19132.88133 19790.68774 18631.86467 19773.49761 22581.81203 21844.88991 0.837732576 0.946947658 0.962077599 0.907891413 0.875851579 0.905964178 0.852916391 0.905177261 1.033734302 1 14.41500821 -8.2548344 23.98180971 1.016867159 0.901177486 0.621404702 0.036677668 182.1946548 661535.2269 0.027224771 0.009724204 5.56E-09 8.2548344 -0.115689673 S(ph)RESLNVDVVK ddPTM_A459_MK2206_30min_R2 2 SRESLNVDVVK 11 1 Q07866-6;Q07866-4;Q07866-7;G3V5R9;Q07866-9;H0YG16;G3V3H3;Q07866-3;G3V2E7;Q07866-10;Q07866-5;Q07866;Q07866-2;Q07866-8;G5E9S8;F8W6L3;E7EVH7;H0YJT3;H0YJL0;H0YJU9;H0YGB8 Q07866-6 KLC1 Kinesin light chain 1 1 S(0.5)RES(0.5)LNVDVVK;S(0.645)RES(0.355)LNVDVVK 109.1 0.0052731 72031000 117173 121598 111525 114983 130703 111781.9 144358 109325.5 107427 137801 TRUE FALSE 126143.855 115559.6201 115243.1878 105588.5211 125570.9435 116035.8385 125403.6212 123614.7182 116770.8063 133304.5647 0.946283087 0.866884194 0.86451044 0.792084812 0.941985324 0.870456603 0.940730136 0.927310468 0.875970051 1 17.02436666 -6.991019716 1.384538215 0.930623869 0.872052025 0.211638196 0.04998561 0.71568745 2.796598375 0.026054955 0.019251505 1.02E-07 6.991019716 -0.058571844 S(ph)RFSGGFGAR ddPTM_A459_MK2206_30min_R2 2 SRFSGGFGAR 10 1 A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y5G6 1 S(0.92)RFS(0.08)GGFGAR;S(0.984)RFS(0.016)GGFGAR 74.237 0.034609 34865000 42671 72726 65762 66068 76644 73648 64408 53682 66272 58725 TRUE FALSE 45937.92457 69114.53259 67954.47226 60670.03306 73634.57145 76450.72625 55951.15223 60698.42172 72036.21877 56808.80806 0.80864088 1.216616489 1.196196058 1.067968773 1.296182299 1.345754802 0.984902767 1.068468496 1.26804665 1 15.79382701 -4.756412995 24.99724704 1.165371328 0.80864033 0.438164843 0.119399407 150.886471 750304.831 0.030006807 0.24316815 1.75E-05 4.756412995 -0.356730998 S(ph)RGPTPPAMGPR ddPTM_A459_MK2206_30min_R1 1 SRGPTPPAMGPR 12 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 S(0.989)RGPT(0.011)PPAMGPR 64.224 0.045078 11484000 661.01 454.41 562.92 376.14 597.74 669.84 695.94 586.41 306.36 370.28 TRUE FALSE 604.7876284 424.8278264 524.7105588 405.110368 573.9307501 707.7657619 649.5151124 581.2830792 338.2072183 416.1530819 1.453281628 1.020845081 1.260859481 0.973464779 1.379133725 1.70073416 1.560760068 1.396801092 0.81269906 1 8.700970511 -8.258622996 24.80806772 0.906349501 1.337781252 0.400581533 0.213686902 237.2887842 2090209.369 0.17804813 0.060447036 5.51E-09 8.258622996 0.431431751 S(ph)RLSLQENQLPK ddPTM_A459_MK2206_30min_R2 2 SRLSLQENQLPK 12 1 Q5RGS4 Q5RGS4 PLEKHA1 1 S(0.926)RLS(0.074)LQENQLPK;S(0.926)RLS(0.074)LQENQLPK 89.506 0.014125 28966000 118971 164327 156205 138222 164800 133822 156719 126844 104099 120065 TRUE FALSE 128079.5112 156166.7601 161412.7967 126928.8204 158329.1239 138914.69 136141.607 143422.9463 113153.3429 116147.2889 1.102733542 1.344557946 1.389725049 1.092826373 1.363175374 1.196021804 1.172146232 1.234836798 0.97422285 1 16.82559595 -8.258493445 22.75880794 0.987111332 1.241550762 0.509533809 0.097987241 54.24902399 419134.6855 0.072004691 0.024402266 5.51E-09 8.258493445 0.25443943 S(ph)RLSSSSSNDSGNK ddPTM_A459_MK2206_30min_R2 1 SRLSSSSSNDSGNK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.805)RLS(0.182)S(0.01)S(0.001)S(0.001)SNDSGNK 68.123 0.035358 2240200 6549.8 5656 5672.3 5697.5 6452.2 7008.5 9196.5 7183.7 5653.1 4638.4 TRUE FALSE 7051.257724 5375.131265 5861.411651 5231.996025 6198.854208 7275.213379 7988.988503 8122.634255 6144.79642 4487.049388 1.571468712 1.197921128 1.306295328 1.166021493 1.381498992 1.621380277 1.780454774 1.810239548 1.369451479 1 12.13155135 -6.637735603 4.581385796 1.582498828 1.299203258 0.111132641 0.240902677 0.317700288 11.31427862 0.078627903 0.078285722 2.30E-07 6.637735603 -0.283295569 S(ph)RLTPVS(ph)PESSSTEEK ddPTM_A459_MK2206_30min_R1 1 SRLTPVSPESSSTEEK 16 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 2 S(0.999)RLT(0.001)PVS(0.661)PES(0.249)S(0.05)S(0.033)T(0.007)EEK 180.93 3.41E-05 27035000 5268.1 6055.8 5806.7 5091 4593.4 4160.2 4654.3 4895.1 4693.8 4167.1 TRUE FALSE 4820.020431 5661.566319 5412.557382 5483.109702 4410.435151 4395.746929 4343.820139 4852.302657 5181.737307 4683.351808 1.029181797 1.208870602 1.155701644 1.170766136 0.941726211 0.938589948 0.927502421 1.036074772 1.106416413 1 12.1933257 -6.256568715 24.97419795 0.98765482 1.147009491 0.553167621 0.065640248 310.0362023 1589699.475 0.020572881 0.025717787 5.54E-07 6.256568715 0.159354671 S(ph)RLTPVS(ph)PESSSTEEK ddPTM_A459_MK2206_30min_R2 1 SRLTPVSPESSSTEEK 16 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 2 S(0.952)RLT(0.048)PVS(0.994)PES(0.004)S(0.001)S(0.001)TEEK 112.82 0.0046946 158820000 109500 117720 112710 118040 128360 103870 130370 107070 106390 121420 TRUE FALSE 117883.4042 111874.196 116467.6951 108395.7544 123319.9414 107822.8456 113252.2624 121064.4166 115643.6099 117458.0753 1.003621112 0.95246066 0.991568224 0.922846336 1.049906029 0.917968776 0.964193071 1.030703221 0.984552229 1 16.84178638 -7.741159645 24.9996209 1.005720804 0.970863173 0.139247431 0.037869633 424.1795245 522903.3933 0.016863091 0.009720192 1.81E-08 7.741159645 -0.034857631 S(ph)RLTPVSPESSSTEEK ddPTM_A459_MK2206_30min_R1 1 SRLTPVSPESSSTEEK 16 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 S(0.395)RLT(0.302)PVS(0.302)PES(0.001)SSTEEK 66.335 0.029347 220060000 1794.7 2110.8 2351.1 2249.4 2319.6 1841.7 1853.2 2115.1 1462.7 1218.1 TRUE FALSE 1642.051341 1973.386536 2191.513883 2422.649178 2227.20542 1945.975462 1729.576409 2096.607904 1614.752899 1369.007424 1.199446629 1.441472487 1.600804966 1.769639182 1.626876072 1.421449897 1.263379861 1.531480302 1.179506313 1 10.41891456 -8.471210512 0.804450067 0.996254525 1.520601136 0.488403149 0.162363048 0.609355673 0.887941929 0.169516553 0.062838011 3.38E-09 8.471210512 0.52434661 S(ph)RLTPVSPESSSTEEK ddPTM_A459_MK2206_30min_R2 1 SRLTPVSPESSSTEEK 16 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 S(0.5)RLT(0.5)PVSPESSSTEEK 106.31 0.0019338 51045000 180670 178100 176840 193670 174160 149790 205830 155040 187290 195710 TRUE FALSE 194502.2341 169255.813 182735.7573 177846.5415 167321.6033 155490.3634 178804.2738 175304.2603 203580.1457 189323.9987 1.027351183 0.894000835 0.965201235 0.939376638 0.883784435 0.821292411 0.944435333 0.925948435 1.075300263 1 17.53049777 -8.24711572 22.93208509 1.037650109 0.921742061 0.409759819 0.053871327 221.7978098 355100.7242 0.037347943 0.013933901 5.66E-09 8.24711572 -0.115908048 S(ph)RNSPLLER ddPTM_A459_MK2206_30min_R2 2 SRNSPLLER 9 1 Q7KZI7-14;E9PC69;Q7KZI7-13;E7ETY4;Q7KZI7-15;Q7KZI7-16;Q7KZI7-3;Q7KZI7-9;Q7KZI7-8;Q7KZI7-11;Q7KZI7-6;Q7KZI7;Q7KZI7-12;Q7KZI7-4;Q7KZI7-5;Q7KZI7-2;Q7KZI7-7;Q7KZI7-10 Q7KZI7-14 MARK2 Serine/threonine-protein kinase MARK2 1 S(0.99)RNS(0.01)PLLER;S(0.83)RNS(0.17)PLLER 81.525 0.024007 207465000 39528 45146 45423 59961 44092 41532 48075 48150 36268 36676 TRUE FALSE 42554.29407 42904.11529 46937.38015 55061.99449 42360.72654 43112.52936 41762.69475 54443.37032 39422.52508 35479.26512 1.199413063 1.209272941 1.322952434 1.551948562 1.19395727 1.215147191 1.177101459 1.534512345 1.111142662 1 15.11468851 S(ph)RNTDEMVELR ddPTM_A459_MK2206_30min_R2 1 SRNTDEMVELR 11 1 P61978;P61978-2;P61978-3;Q5T6W2;S4R457 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 S(0.999)RNT(0.001)DEMVELR 85.909 0.018813 4348500 8594.9 9025 9391 8421.5 10203 12213 10623 9685.1 9487.3 6267.2 TRUE FALSE 9252.932152 8576.831624 9704.091253 7733.436511 9802.378954 12677.77427 9228.187339 10950.97582 10312.4882 6062.701777 1.526206053 1.414688028 1.600621573 1.275575939 1.616833437 2.091109663 1.522124571 1.806286409 1.700972369 1 12.56574514 -6.509091135 24.5636293 1.688768475 1.459937084 0.06014113 0.271703928 1026.609522 1828983.433 0.080664213 0.087755586 3.10E-07 6.509091135 -0.228831391 S(ph)RPALSPLGDIDFCPPNPGPDGPR ddPTM_A459_MK2206_30min_R1 1 SRPALSPLGDIDFCPPNPGPDGPR 24 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 S(0.5)RPALS(0.5)PLGDIDFCPPNPGPDGPR 95.674 6.14E-06 17541000 1965.8 1998.5 2161 1644.8 1909.3 1572.9 2007.3 1598.3 1698.4 1504 TRUE FALSE 1798.598387 1868.397287 2014.317341 1771.482781 1833.248538 1661.956239 1873.39668 1584.326232 1874.954758 1690.326875 1.064053595 1.105346732 1.191673262 1.04801196 1.084552678 0.983215888 1.10830438 0.937289855 1.109226142 1 10.72308655 -6.198981827 2.044938021 1.03108174 1.1161884 0.255494129 0.060625053 0.426360581 3.502502693 0.019300012 0.026220202 6.32E-07 6.198981827 0.08510666 S(ph)RPALSPLGDIDFCPPNPGPDGPR ddPTM_A459_MK2206_30min_R2 3 SRPALSPLGDIDFCPPNPGPDGPR 24 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 S(0.5)RPALS(0.5)PLGDIDFCPPNPGPDGPR;S(0.803)RPALS(0.197)PLGDIDFCPPNPGPDGPR;S(0.627)RPALS(0.373)PLGDIDFCPPNPGPDGPR 105.75 3.36E-07 19271500 45955.4 62366.1 55378.4 69492.6 63499.7 52865.9 72137 52672.7 50159.6 56415.6 TRUE FALSE 49473.78076 59269.09016 57224.68822 63814.83228 61006.38272 54877.74887 62665.32525 59557.20274 54522.39134 54574.76359 0.906532205 1.086016434 1.048555861 1.169310283 1.117849693 1.005551747 1.148247306 1.091295662 0.999040358 1 15.73594636 -4.760351795 24.9766319 1.080575403 0.906531995 0.423790897 0.058121793 24.96489447 573060.1253 0.014123865 0.084364045 1.74E-05 4.760351795 -0.174043408 S(ph)RPCSLPVSELETVIASACGDPETPR ddPTM_A459_MK2206_30min_R1 1 SRPCSLPVSELETVIASACGDPETPR 26 1 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 S(0.5)RPCS(0.5)LPVSELETVIASACGDPETPR 108.47 1.45E-08 12547000 1061.1 1172 1300.8 1145.7 1422.2 1255.8 1476.2 1441.7 1272.1 853.97 TRUE FALSE 970.8478729 1095.702587 1212.50532 1233.942013 1365.550762 1326.902311 1377.725391 1429.095369 1404.339347 959.7662507 1.011546168 1.141634837 1.263333983 1.285669309 1.422795146 1.382526537 1.435480139 1.489003565 1.463209762 1 9.906539273 -5.116508843 0.942033907 1.39411814 0.921268323 0.414484074 0.132830594 1.133159661 1.133408448 0.044813206 0.491157682 7.65E-06 5.116508843 -0.472849817 S(ph)RPTSFADELAAR ddPTM_A459_MK2206_30min_R2 4 SRPTSFADELAAR 13 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;A0A0A0MT65;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2;A0A087WYF6 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 S(0.986)RPT(0.01)S(0.004)FADELAAR;S(0.828)RPT(0.012)S(0.16)FADELAAR;S(0.989)RPT(0.009)S(0.002)FADELAAR;S(0.852)RPT(0.074)S(0.074)FADELAAR 110.32 0.0030987 35034500 26394.5 35039.1 34595 33514.1 31641.8 28281 29004.4 22758.2 21967.2 20770.1 TRUE FALSE 28415.28321 33299.10925 35748.38003 30775.89082 30399.38394 29357.25327 25196.08744 25732.77488 23877.86735 20092.37334 1.414232293 1.657300941 1.779201463 1.531720037 1.512981241 1.461114264 1.254012506 1.280723509 1.188404523 1 14.29436037 -7.554180013 0.617039515 1.031214471 1.631307318 0.812215302 0.095308177 0.325302363 0.249805589 0.092527231 0.056318079 2.79E-08 7.554180013 0.600092848 S(ph)RQPSPLLLLPPPAGLTSDPGPSVR ddPTM_A459_MK2206_30min_R1 1 SRQPSPLLLLPPPAGLTSDPGPSVR 25 1 I3L2J0 I3L2J0 CIC 1 S(0.657)RQPS(0.343)PLLLLPPPAGLTSDPGPSVR 79.299 0.00012093 26791000 1854.4 1964.8 1810.8 1603.1 2215.4 1899.4 2282.5 2340.2 1958.2 1868.8 TRUE FALSE 1696.673542 1836.891163 1687.887941 1726.57104 2127.155927 2006.942387 2130.23859 2319.739878 2161.761897 2100.321053 0.807816281 0.87457637 0.803633301 0.822051009 1.012776558 0.955540766 1.014244268 1.104469183 1.029253073 1 11.03639416 -6.272773317 6.817485106 1.021581131 0.828437882 0.85475457 0.03884109 0.059277903 15.55341407 0.013023805 0.015453196 5.34E-07 6.272773317 -0.193143249 S(ph)RQPSPLLLLPPPAGLTSDPGPSVR ddPTM_A459_MK2206_30min_R2 2 SRQPSPLLLLPPPAGLTSDPGPSVR 25 1 I3L2J0 I3L2J0 CIC 1 S(0.68)RQPS(0.32)PLLLLPPPAGLTSDPGPSVR;S(0.864)RQPS(0.136)PLLLLPPPAGLTSDPGPSVR 80.68 0.00010403 47954000 43272 67755 59036 66405 71631 80928 86787 61126 74738 68507 TRUE FALSE 46584.93759 64390.38522 61004.23077 60979.49908 68818.40702 84007.77175 75391.76265 69115.37808 81238.57614 66271.6222 0.702939449 0.971613235 0.920518146 0.920144959 1.038429493 1.267628118 1.137617583 1.042910612 1.225842577 1 16.01610361 -6.348254921 2.771201024 1.138587272 0.883041925 0.599276107 0.098363849 0.194300716 2.912212694 0.031950291 0.037851341 4.48E-07 6.348254921 -0.255545346 S(ph)RS(ph)PESQVIGENTK ddPTM_A459_MK2206_30min_R2 1 SRSPESQVIGENTK 14 1 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 2 S(0.958)RS(0.958)PES(0.083)QVIGENTK 89.557 0.022109 0 30503 27726 26776 26951 25200 19646 30633 25656 24819 28634 TRUE FALSE 32838.33313 26349.16716 27668.69848 24749.01709 24210.52138 20393.6423 26610.8503 29009.32729 26977.71176 27699.67493 1.185513304 0.951244635 0.998881704 0.893476806 0.8740363 0.736241214 0.960691791 1.047280424 0.973936042 1 14.75758142 -2.987574114 1.265644251 0.924713189 24.1587689 0.442392476 0.083050132 133.6733754 3.158366276 0.026624288 8705.138819 0.001029025 2.987574114 23.23405572 S(ph)RS(ph)PPPVSK ddPTM_A459_MK2206_30min_R1 1 SRSPPPVSK 9 1 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 2 S(1)RS(1)PPPVSK 77.279 0.044361 0 3961.4 4427.6 4507.9 2851.6 2457.3 2488.5 3735.5 3185.3 4986.4 6803.5 TRUE FALSE 3624.462128 4139.362435 4201.916308 3071.230726 2359.420538 2629.396719 3486.311611 3157.451258 5504.754124 7646.368944 0.474010887 0.541350079 0.549530939 0.401658715 0.308567446 0.343875209 0.455943421 0.412934725 0.71991741 1 12.9005591 -8.508840078 2.612641148 0.998525191 0.434651034 0.857448258 0.073512672 0.103941367 1.665197517 0.081675049 0.022102477 3.10E-09 8.508840078 -0.563874157 down S(ph)RSAQEPAR ddPTM_A459_MK2206_30min_R2 1 SRSAQEPAR 9 1 P25685;M0R128;A0A1B0GX60;M0R1D6;M0QZD0;M0QYT3;M0QXK0;M0R080;P25685-2 P25685 DNAJB1 DnaJ homolog subfamily B member 1 1 S(0.868)RS(0.132)AQEPAR 77.387 0.029774 4775300 13034 7675.9 8003 12135 10668 11060 9698.1 12703 10962 13184 TRUE FALSE 14031.89306 7294.725968 8269.816026 11143.53168 10249.12072 11480.89605 8424.72782 14363.32572 11915.45495 12753.80716 1.100212108 0.571964581 0.648419403 0.873741585 0.803612646 0.900193637 0.660565721 1.126199066 0.934266513 1 13.63864035 -7.764903361 24.99998603 1.022674596 0.78746388 0.328037061 0.148036514 102.2816382 738154.938 0.075165451 0.038391955 1.72E-08 7.764903361 -0.235210716 S(ph)RSDIDVNAAAGAK ddPTM_A459_MK2206_30min_R1 2 SRSDIDVNAAAGAK 14 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 S(0.5)RS(0.5)DIDVNAAAGAK;S(0.658)RS(0.342)DIDVNAAAGAK 114.54 0.013979 94267000 5021 4996.32 4932.1 4223.7 4691 4561 4976.3 4639 5002 3757.57 TRUE FALSE 4593.937584 4671.05866 4597.322794 4549.010106 4504.147537 4819.239878 4644.340107 4598.441712 5521.9758 4223.08614 1.087815269 1.10607705 1.088616865 1.077176727 1.066553555 1.141165422 1.099750266 1.088881818 1.307568829 1 12.04408196 S(ph)RSDIDVNAAASAK ddPTM_A459_MK2206_30min_R2 1 SRSDIDVNAAASAK 14 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.756)RS(0.244)DIDVNAAASAK 165.66 0.001173 90745000 98233 141390 121590 137720 140160 131480 148380 116590 122170 121480 TRUE FALSE 105753.794 134368.7782 125643.7499 126467.8355 134656.6142 136483.5635 128897.5278 131828.7133 132796.1258 117516.1175 0.899908848 1.143407228 1.069161852 1.076174384 1.14585656 1.161402932 1.096849781 1.121792619 1.130024788 1 16.84249911 -4.7557764 24.99981886 1.109539022 0.899908513 0.646055174 0.045419205 108.673507 479701.3872 0.010822584 0.093141703 1.75E-05 4.7557764 -0.209630509 S(ph)RSFDYNYR ddPTM_A459_MK2206_30min_R2 1 SRSFDYNYR 9 1 O75494-2;O75494;Q5JRI1;O75494-5;O75494-4;O75494-6;O75494-3 O75494-2;O75494-6 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.693)RS(0.307)FDYNYR 105.25 0.0076192 22637000 25937 33202 26186 29341 23229 33482 29740 25027 29654 21752 TRUE FALSE 27922.75666 31553.23696 27059.02817 26943.74644 22316.91274 34756.18097 25835.10228 28298.11483 32233.25132 21042.23402 1.326986319 1.499519344 1.285938943 1.280460355 1.060577157 1.651734361 1.227773736 1.344824642 1.531835987 1 14.36100026 -11.65818692 2.601681339 0.207495011 1.352346502 0.30997941 0.159510011 11468048.22 5193407.201 55518987.34 0.039048998 2.20E-12 11.65818692 1.144851491 S(ph)RSGCK ddPTM_A459_MK2206_30min_R1 1 SRSGCK 6 1 P06401-2 P06401-2 1 S(0.742)RS(0.258)GCK 68.787 0.043467 803800 711.93 564.19 574.31 465.33 573.93 598.27 706.22 610.49 276.67 479.68 TRUE FALSE 651.376615 527.4611285 535.3274373 501.1697972 551.0691528 632.1435304 659.1093524 605.1525503 305.4308366 539.1063798 1.20825247 0.978398973 0.992990358 0.929630618 1.022190004 1.172576608 1.222596091 1.12251046 0.566550217 1 9.074426172 -8.238290016 24.90175147 0.783275044 1.075527328 0.43349677 0.136083632 615.9626276 662592.7738 0.092959386 0.035086744 5.78E-09 8.238290016 0.292252284 S(ph)RSGCK ddPTM_A459_MK2206_30min_R2 1 SRSGCK 6 1 P06401-2 P06401-2 1 S(0.931)RS(0.069)GCK 82.671 0.032449 1264000 3420.7 6779.8 4130.7 6042.1 5552.7 4712.5 5262.8 4372.9 4866.1 4318.1 TRUE FALSE 3682.591422 6443.124991 4268.415476 5548.441102 5334.673098 4891.83749 4571.788038 4944.453044 5289.344582 4177.200751 0.881593115 1.542450405 1.021836328 1.328267764 1.277092823 1.171080296 1.094462132 1.183676184 1.266241413 1 12.02832076 -6.980024866 19.00960764 1.148739899 1.224722929 0.032615769 0.177034662 58.26504328 55443.43678 0.058189905 0.051286596 1.05E-07 6.980024866 0.07598303 S(ph)RSGEGEVSGLMR ddPTM_A459_MK2206_30min_R1 1 SRSGEGEVSGLMR 13 1 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 S(0.65)RS(0.35)GEGEVSGLMR 155.88 0.00020096 62992000 1474 1152.2 1318.9 1204 1609.8 1373.5 1369.2 1420.3 1071 1018.7 TRUE FALSE 1348.62856 1077.191571 1229.376743 1296.732289 1545.678257 1451.266383 1277.863166 1407.882467 1182.334283 1144.904247 1.177940045 0.940857346 1.073781276 1.132612 1.350050244 1.267587562 1.116131039 1.22969451 1.032692722 1 10.16101123 -4.463426705 21.525567 1.138790435 1.923431035 0.007512715 0.11998241 95.17495606 760754.6509 0.030784032 81153.90547 3.44E-05 4.463426705 0.7846406 S(ph)RSLGPGAGPR ddPTM_A459_MK2206_30min_R2 3 SRSLGPGAGPR 11 1 H3BUV2;P78549-3;P78549-2;P78549 H3BUV2 NTHL1 Endonuclease III-like protein 1 1 S(1)RSLGPGAGPR;S(0.997)RS(0.003)LGPGAGPR;S(0.861)RS(0.139)LGPGAGPR 110.8 0.0047366 15408600 10497.1 26751.4 13877.3 21607.3 20403.4 23139.2 25150.9 20679.6 24231 17474.8 TRUE FALSE 11300.76605 25422.96438 14339.96226 19841.91447 19602.26 24019.77847 21848.55662 23382.49472 26338.56858 16904.59871 0.668502473 1.503908186 0.848287647 1.173758385 1.159581504 1.420902021 1.292462305 1.383203182 1.558071211 1 14.04512815 -6.478714854 2.095866729 1.352483066 1.060645946 0.227859881 0.242243666 0.475095157 4.163489546 0.082241803 0.091496661 3.32E-07 6.478714854 -0.29183712 S(ph)RSPASAEAPGDSGER ddPTM_A459_MK2206_30min_R1 1 SRSPASAEAPGDSGER 16 1 H7BY64;Q8NB15;Q8NB15-1 H7BY64 PRAP1;ZNF511 Zinc finger protein 511 1 S(0.703)RS(0.281)PAS(0.015)AEAPGDSGER 211.9 1.60E-07 2869500 688.31 725.57 482.6 414.47 629.46 611.79 745.73 399.51 543.68 495.4 TRUE FALSE 629.76562 678.3352611 449.8424566 446.3925512 604.3872753 646.4290211 695.9837124 396.0171262 600.1974816 556.7738921 1.131097613 1.218331662 0.807944595 0.801748353 1.085516552 1.161026101 1.250029361 0.711271006 1.077991425 1 9.120947753 -5.228206396 24.9254645 0.989149016 1.174714699 0.176036306 0.162441642 1162.700253 872046.7184 0.043667679 0.115517907 5.91E-06 5.228206396 0.185565683 S(ph)RSPASAEAPGDSGER ddPTM_A459_MK2206_30min_R2 1 SRSPASAEAPGDSGER 16 1 H7BY64;Q8NB15;Q8NB15-1 H7BY64 PRAP1;ZNF511 Zinc finger protein 511 1 S(0.706)RS(0.199)PAS(0.096)AEAPGDSGER 134.93 0.001964 3483300 4612.6 3644.4 4165.7 3745.5 5520.9 3489.1 4961.3 4867.6 3665.8 4827.5 TRUE FALSE 4965.744202 3463.424395 4304.582359 3439.480669 5304.121726 3621.880145 4309.87535 5503.812033 3984.644658 4669.97907 1.063333289 0.741635957 0.921756242 0.736508797 1.135791327 0.775566676 0.92288965 1.178551756 0.853246791 1 12.18920037 -7.541601459 24.97716107 1.019683741 0.889913539 0.113432612 0.142641673 456.5620752 609072.2229 0.062642151 0.036173379 2.87E-08 7.541601459 -0.129770203 S(ph)RSPFSTTR ddPTM_A459_MK2206_30min_R1 1 SRSPFSTTR 9 1 Q8NG27-3;Q8NG27;K7EPI8;Q8NG27-2 Q8NG27-3 PJA1 E3 ubiquitin-protein ligase Praja-1 1 S(0.999)RS(0.001)PFSTTR 72.243 0.037395 5890300 536.22 539.18 713.93 619.86 742.32 620.38 719.6 545.31 453.66 503.72 TRUE FALSE 490.6116732 504.079284 665.4704207 667.6017246 712.7518225 655.5053795 671.596797 540.5424122 500.8195804 566.1246365 0.866614243 0.89040337 1.175483944 1.17924867 1.259001599 1.157881741 1.186305548 0.954811675 0.884645444 1 9.144975898 -11.52036288 2.871558775 0.928657975 1.072538978 0.011457575 0.142028598 55723793.28 10862.57443 26285740.24 0.039089051 3.02E-12 11.52036288 0.143881003 S(ph)RSPGSPVGEGTGSPPK ddPTM_A459_MK2206_30min_R1 2 SRSPGSPVGEGTGSPPK 17 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 S(0.937)RS(0.056)PGS(0.006)PVGEGTGSPPK;S(0.56)RS(0.043)PGS(0.018)PVGEGT(0.001)GS(0.378)PPK 186.36 2.86E-07 19007800 5223.3 4991 5440.3 4872.8 5160.6 3957 4536.1 5095.4 4007.7 3168.8 TRUE FALSE 4779.030906 4666.084993 5071.027594 5248.1039 4955.042374 4181.04192 4233.505046 5050.851455 4424.314757 3561.374867 1.34190617 1.310192037 1.423896047 1.47361738 1.391328506 1.173996582 1.188727726 1.41823078 1.242305267 1 11.79821859 -6.749038788 24.99346475 1.229796227 1.390584812 0.423916119 0.104932265 258.1319744 520265.5038 0.035214007 0.034977046 1.78E-07 6.749038788 0.160788585 S(ph)RSPGSPVGEGTGSPPK ddPTM_A459_MK2206_30min_R2 1 SRSPGSPVGEGTGSPPK 17 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 S(0.656)RS(0.337)PGS(0.006)PVGEGTGS(0.001)PPK 122.97 0.0064941 14285000 14739 18250 17893 21454 22555 21418 20493 19467 17779 14594 TRUE FALSE 15867.42917 17343.73154 18489.54369 19701.13957 21669.37737 22233.077 17802.24448 22011.40374 19325.38528 14117.79898 1.123930805 1.228501098 1.309661918 1.39548237 1.534897714 1.574826008 1.260978749 1.559124321 1.368866728 1 13.78522756 -5.281014523 1.632769568 1.416793032 1.129987237 0.198360936 0.161843454 0.63400872 2.861241835 0.045140464 0.210009653 5.24E-06 5.281014523 -0.286805796 S(ph)RSPLAR ddPTM_A459_MK2206_30min_R2 3 SRSPLAR 7 1 Q8N3Y1 Q8N3Y1 FBXW8 F-box/WD repeat-containing protein 8 1 S(0.943)RS(0.057)PLAR;S(0.713)RS(0.287)PLAR;S(0.997)RS(0.003)PLAR 68.846 0.039233 14200300 15010.4 13648.3 13214 13886.9 14968.2 12763.5 16561.5 15900.8 18766.4 16908.5 TRUE FALSE 16159.60777 12970.54527 13654.54816 12752.29585 14380.47326 13249.22394 14386.95516 17979.08916 20398.66755 16356.77703 0.987945714 0.792976834 0.834794541 0.779633777 0.879175233 0.810014339 0.879571515 1.099182872 1.247108004 1 13.99760088 -7.762157262 3.920157795 1.13859067 0.842997178 0.705065954 0.078210703 0.103615676 3.508724009 0.041151698 0.020161198 1.73E-08 7.762157262 -0.295593492 S(ph)RSPLELEPEAK ddPTM_A459_MK2206_30min_R2 1 SRSPLELEPEAK 12 1 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(0.837)RS(0.163)PLELEPEAK 143.94 0.0037217 49492000 55870 56077 48370 65660 60853 54826 58553 56149 45449 54716 TRUE FALSE 60147.45016 53292.29772 49982.63166 60295.36796 58463.60546 56912.44185 50864.92077 63487.86709 49402.07187 52930.6214 1.13634506 1.006833026 0.944304645 1.13913962 1.104532762 1.075227162 0.960973429 1.199454407 0.933336329 1 15.69181497 S(ph)RSPLGFYVHLK ddPTM_A459_MK2206_30min_R1 2 SRSPLGFYVHLK 12 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.5)RS(0.5)PLGFYVHLK;S(0.64)RS(0.36)PLGFYVHLK 88.706 0.012049 13755700 4564.4 5048.8 5552 4955.8 5451.4 4595.03 5243.6 5330.22 4829.4 4401.4 TRUE FALSE 4176.173811 4720.122202 5175.145709 5337.496575 5234.259194 4855.196628 4893.809011 5283.618449 5331.433412 4946.678661 0.844237942 0.954200288 1.046185949 1.079006125 1.058136086 0.981506372 0.989312091 1.068114347 1.077780422 1 12.27224447 -4.907558001 2.382521533 1.038327327 0.825117062 0.753799352 0.034480517 0.221303029 1.913379796 0.010042503 0.088605447 1.24E-05 4.907558001 -0.213210265 S(ph)RSPLGFYVHLK ddPTM_A459_MK2206_30min_R2 1 SRSPLGFYVHLK 12 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.5)RS(0.5)PLGFYVHLK 97.2 0.0070302 6427500 26125 32154 27019 34599 35024 30367 36075 26530 28079 26891 TRUE FALSE 28125.15009 30557.27912 27919.79997 31772.15102 33648.78178 31522.63746 31338.30917 29997.56209 30521.26066 26013.54887 1.081173131 1.174667834 1.073279164 1.22136934 1.293509853 1.211777663 1.204691806 1.153151469 1.173283231 1 14.66697561 -5.768178648 24.98694743 1.193186705 1.11620282 0.134496768 0.075594144 261.5506698 969745.5862 0.020619202 0.031377095 1.71E-06 5.768178648 -0.076983885 S(ph)RSPLHPMSEIPR ddPTM_A459_MK2206_30min_R1 1 SRSPLHPMSEIPR 13 1 Q9NVW2-2;Q9NVW2 Q9NVW2-2 RLIM E3 ubiquitin-protein ligase RLIM 1 S(0.759)RS(0.241)PLHPMSEIPR 76.24 0.025037 13615000 1102.8 1081.1 1129.8 931.21 1102.7 1109 861.72 805.7 1216.7 1063.7 TRUE FALSE 1009.001069 1010.720194 1053.112324 1002.931956 1058.777124 1171.790622 804.2362311 798.6558498 1343.180319 1195.479187 0.844013915 0.845451937 0.880912303 0.838937195 0.885650822 0.980184879 0.67273127 0.668063366 1.123549731 1 10.2233733 -8.277980377 24.98512431 1.0617749 0.831723511 0.50159951 0.093517648 825.8567514 1247441.613 0.094162002 0.024591585 5.27E-09 8.277980377 -0.230051388 S(ph)RSPQAFR ddPTM_A459_MK2206_30min_R1 2 SRSPQAFR 8 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2;H3BSK8 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 S(0.715)RS(0.285)PQAFR;S(0.986)RS(0.014)PQAFR 81.525 0.023934 19735800 3019.1 3001 2709.4 2444.35 2563.11 2683.9 3020 2534.4 1967.62 2192.41 TRUE FALSE 2762.309691 2805.634355 2525.493477 2632.614261 2461.015901 2835.860099 2818.54131 2512.242008 2172.16114 2464.022303 1.121057098 1.13864 1.024947491 1.068421442 0.998779881 1.15090683 1.143878165 1.019569508 0.881550925 1 11.2667996 -8.007334385 6.194459317 0.942684248 1.089068504 0.55195111 0.05481643 0.114750124 18.90432276 0.035064865 0.014754595 9.83E-09 8.007334385 0.146384256 S(ph)RSPSLNR ddPTM_A459_MK2206_30min_R2 1 SRSPSLNR 8 1 Q9UPX8;Q9UPX8-3;A0A2R8Y2H5;A0A087X158 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(1)RSPSLNR 77.923 0.028719 7349500 3787.8 1991.9 4066.4 4984.8 5158.4 3380.3 3544.1 3438.5 4585.5 4168.3 TRUE FALSE 4077.79688 1892.985142 4201.971746 4577.525894 4955.855297 3508.939685 3078.755413 3887.923756 4984.338501 4032.288712 1.01128594 0.469456747 1.042081073 1.135217793 1.229042772 0.870210428 0.763525539 0.964197763 1.236106553 1 11.97738322 -5.311446213 24.82890229 1.0244051 0.74037076 0.281443336 0.184967604 387.751851 192522.0003 0.049522671 0.103089889 4.88E-06 5.311446213 -0.284034341 S(ph)RSPVDLR ddPTM_A459_MK2206_30min_R1 1 SRSPVDLR 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.598)RS(0.402)PVDLR 80.219 0.025669 19656000 3800.2 3102.6 3244.8 2746.5 3584.2 3016.1 3687.3 2952.4 2593.3 2989.3 TRUE FALSE 3476.973034 2900.620176 3024.552017 2958.035906 3441.433724 3186.868976 3441.326945 2926.587478 2862.882815 3359.637052 1.034925196 0.863373076 0.900261537 0.880462937 1.024346878 0.948575375 1.024315095 0.871102275 0.852140505 1 11.71408967 -4.735007168 24.18174081 0.929462419 1.034925982 0.198978642 0.063519271 3183.917811 2912602.34 0.016345007 1.253094309 1.84E-05 4.735007168 0.105463563 S(ph)RSQPCDLDAR ddPTM_A459_MK2206_30min_R1 1 SRSQPCDLDAR 11 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.871)RS(0.129)QPCDLDAR 153.81 0.0026302 2583900 1090.3 1347 1186.7 833.01 1252.3 820.89 1197.1 1041.1 808.75 875.03 TRUE FALSE 997.5642596 1259.310055 1106.15011 897.1685745 1202.418239 867.3680824 1117.243643 1031.997772 892.8224566 983.4353225 1.01436692 1.28052148 1.124781757 0.912280202 1.222671397 0.88197776 1.136062146 1.049380421 0.907860879 1 9.941686364 -5.540688687 24.47297547 1.025301967 1.161246072 0.18969606 0.116340335 262.3435375 360489.5684 0.029558752 0.051211258 2.88E-06 5.540688687 0.135944104 S(ph)RSQPCDLDAR ddPTM_A459_MK2206_30min_R2 3 SRSQPCDLDAR 11 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.87)RS(0.13)QPCDLDAR;S(0.83)RS(0.17)QPCDLDAR;S(0.842)RS(0.158)QPCDLDAR 149.82 0.0029639 25280600 48492 61948 50501 65247 72306 62832 62064 48180.3 62423 58956 TRUE FALSE 52204.5848 58871.7524 52184.67813 59916.11139 69466.90313 65223.11579 53914.92225 54477.63064 67852.43971 57032.27055 0.915351683 1.032253351 0.91500264 1.050565071 1.218028012 1.14361773 0.945340624 0.955207115 1.189720119 1 15.79949085 -5.89593414 6.466285905 1.075521361 0.962960314 0.257059424 0.09195257 0.335050294 18.24191696 0.027590002 0.04127139 1.27E-06 5.89593414 -0.112561047 S(ph)RSSDIVSSVR ddPTM_A459_MK2206_30min_R2 1 SRSSDIVSSVR 11 1 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.851)RS(0.128)S(0.021)DIVSSVR 101.45 0.0083914 13222000 13210 18908 21488 14085 17974 20222 19108 14138 14403 16781 TRUE FALSE 14221.36776 17969.05621 22204.3992 12934.21044 17268.25045 20991.56238 16599.09665 15985.88514 15655.74691 16233.43734 0.876054002 1.106916289 1.367818702 0.796763505 1.063745779 1.29310644 1.022525069 0.984750475 0.964413548 1 13.98668089 -7.511694801 23.3746805 0.985476667 1.090170401 0.076512334 0.158694313 638.3421697 1334168.529 0.071378435 0.044869512 3.08E-08 7.511694801 0.104693734 S(ph)RSWEDSPER ddPTM_A459_MK2206_30min_R2 1 SRSWEDSPER 10 1 Q9UDY2-7;Q9UDY2-4;A0A3B3IU51;A0A1B0GTW1;A0A2R8YDH4;A0A3B3ITE1;Q9UDY2-2;Q9UDY2-6;Q9UDY2-3;Q9UDY2;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3ISZ5;A0A3B3IRI3;A0A3B3IU26;B1AN86 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(0.933)RS(0.067)WEDSPER 66.19 0.047567 3865900 13657 16119 10087 24890 17718 34255 16370 9798.5 22208 10776 TRUE FALSE 14702.59042 15318.5539 10423.29555 22856.40738 17022.30229 35558.59803 14220.59934 11079.19759 24139.6117 10424.38 1.410404304 1.469493044 0.999895969 2.192591538 1.632931866 3.411099559 1.364167397 1.062815975 2.315688002 1 13.34767396 -5.762063416 24.99999961 1.892037406 1.310887306 0.125243165 0.673666058 34.91431238 1398837.243 0.188992531 0.300450979 1.73E-06 5.762063416 -0.5811501 S(ph)RSWPASPR ddPTM_A459_MK2206_30min_R1 1 SRSWPASPR 9 1 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 S(0.996)RS(0.004)WPASPR 78.548 0.028155 3905800 1130.3 1426.5 1660.9 1209 1206.9 1180.2 1541.5 1235.1 895.43 1044.1 TRUE FALSE 1034.16205 1333.634591 1548.162736 1302.117389 1158.826617 1247.021904 1438.669348 1224.301651 988.5131528 1173.450991 0.881299737 1.136506425 1.31932458 1.109647868 0.987537295 1.062696196 1.226015709 1.043334286 0.842398328 1 10.19654187 -8.028407425 8.953537678 0.927818925 1.109086831 0.269358591 0.118299546 0.482904611 141.8718712 0.079246559 0.031286903 9.37E-09 8.028407425 0.181267906 S(ph)RT(ph)SVQTEDDQLIAGQSAR ddPTM_A459_MK2206_30min_R2 1 SRTSVQTEDDQLIAGQSAR 19 1 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-3;P26232-2;P26232-5;P26232;P26232-6 G3XAM7;P26232-6 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 2 S(0.667)RT(0.667)S(0.667)VQTEDDQLIAGQSAR 99.371 0.0071863 0 5913.5 7785.8 6268.6 7421.8 7533.9 7387.9 9752.3 6611.6 7649.2 8730.2 TRUE FALSE 6366.242107 7399.168494 6477.591995 6815.415199 7238.081231 7669.051711 8471.811295 7475.758821 8314.513589 8445.334289 0.753817657 0.876124999 0.767002439 0.807003603 0.857050886 0.908081486 1.003135105 0.88519395 0.984509707 1 13.04393881 -6.727609998 1.87871572 0.959419425 0.804043406 0.742584002 0.044139 0.175588931 1.278472698 0.017074675 0.016022744 1.87E-07 6.727609998 -0.155376019 S(ph)RTGSES(ph)SQTGTSTTSSR ddPTM_A459_MK2206_30min_R1 1 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.566)RT(0.433)GS(0.002)ES(0.959)S(0.032)QT(0.009)GTSTTSSR 216.53 1.24E-12 13000000 2889.4 2837.6 3263.2 3340.3 3501.3 3406.6 3249.3 4592.1 2908.2 2299.9 TRUE FALSE 2643.641357 2652.871724 3041.703076 3597.570485 3361.835807 3599.478748 3032.545126 4551.951754 3210.517797 2584.828975 1.02275291 1.026323888 1.176752158 1.391802134 1.300602802 1.392540389 1.173209197 1.76102628 1.242061981 1 11.33585311 -5.515223018 2.769573656 1.350710238 1.02400235 0.286426256 0.184997426 0.299429412 4.586945162 0.049720939 0.110870729 3.05E-06 5.515223018 -0.326707888 S(ph)RTGSESSQTGTSTTSSR ddPTM_A459_MK2206_30min_R1 1 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.97)RT(0.026)GS(0.005)ESSQTGTSTTSSR 101.6 0.001377 1943200 167.01 69.184 140.67 153.33 226.32 182.96 211.46 173.56 135.51 0 TRUE FALSE 152.8049225 64.68010903 131.1217123 165.1395032 217.3051952 193.3190371 197.3538892 172.0425832 149.5967494 0 0 S(ph)RTGSESSQTGTSTTSSR ddPTM_A459_MK2206_30min_R2 2 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.486)RT(0.486)GS(0.028)ESSQTGTSTTSSR;S(0.952)RT(0.048)GSESSQTGTSTTSSR 134.08 0.00022206 40279000 5233.7 6453.7 4944.1 7835.6 8177.8 9399.2 8370.3 9780.1 10541.1 8836.5 TRUE FALSE 5634.396096 6133.218643 5108.933826 7195.406415 7856.698482 9756.893142 7271.269555 11058.39265 11457.94582 8548.165729 0.659135103 0.71748944 0.59766434 0.841748586 0.919109284 1.141401963 0.850623372 1.293656792 1.340398185 1 13.06139916 -6.480664345 0.826769175 1.184057364 0.636340631 0.693414506 0.134843336 0.356726624 0.538463807 0.079896466 0.103542821 3.31E-07 6.480664345 -0.547716733 S(ph)RTLTAVHDAILEDLVFPSEIVGK ddPTM_A459_MK2206_30min_R1 1 SRTLTAVHDAILEDLVFPSEIVGK 24 1 P62081;B5MCP9;A0A2R8Y623 P62081 RPS7 40S ribosomal protein S7 1 S(0.333)RT(0.333)LT(0.333)AVHDAILEDLVFPSEIVGK 61.537 0.0028559 3177700 672.9 566.2 627.23 508.23 514.43 617.59 697.94 725.66 714.35 388.33 TRUE FALSE 615.6663215 529.3402771 584.6553752 547.3739627 493.9391638 652.5574121 651.3816961 719.3156311 788.6092388 436.4392521 1.410657539 1.212861296 1.3396031 1.254181332 1.131747801 1.495184975 1.492491092 1.648146054 1.806916392 1 8.769637049 -6.882104051 6.749968353 1.534068485 1.270330407 0.207506379 0.20541582 0.287689548 15.87163754 0.069732087 0.061521519 1.31E-07 6.882104051 -0.263738078 S(ph)RTPLLPR ddPTM_A459_MK2206_30min_R2 2 SRTPLLPR 8 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.924)RT(0.076)PLLPR;S(0.99)RT(0.01)PLLPR 108.43 0.0070822 11544300 12644.3 11985.8 11603.7 12852.1 12840.5 11463.3 12371.8 11021.5 12384.3 11406.4 TRUE FALSE 13612.35733 11390.6026 11990.56157 11802.04232 12336.31745 11899.54391 10747.3678 12462.04789 13461.46403 11034.2101 1.233650366 1.032298868 1.086671493 1.069586514 1.118006394 1.078422815 0.974004274 1.129400997 1.219975323 1 13.42969574 -4.750029002 24.91798956 1.080662268 1.233650716 0.331189304 0.066002522 601.3096213 1313053.59 0.016495743 0.249917553 1.78E-05 4.750029002 0.152988448 S(ph)RTPPSAASSR ddPTM_A459_MK2206_30min_R2 1 SRTPPSAASSR 11 1 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 S(0.998)RT(0.002)PPSAASSR 79.07 0.025507 1494800 2190.2 2407.3 3202.6 2879.7 3367.9 2527.1 1103.8 1272.9 2773.4 2622.6 TRUE FALSE 2357.883396 2287.756983 3309.373086 2644.419298 3235.659324 2623.270561 958.8697341 1439.272401 3014.625319 2537.024777 0.929389188 0.901747986 1.304430732 1.042330892 1.275375532 1.033994853 0.377950481 0.567307191 1.188252218 1 11.30892189 -7.027416947 24.60583657 0.741412946 1.095885178 0.26670997 0.239360949 719.7974318 645993.0836 0.091850856 0.071357219 9.39E-08 7.027416947 0.354472232 S(ph)RTPPSAPSQSR ddPTM_A459_MK2206_30min_R1 4 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.5)RT(0.5)PPSAPSQSR;S(0.87)RT(0.13)PPSAPSQSR;S(0.499)RT(0.499)PPSAPS(0.001)QS(0.001)R;S(0.5)RT(0.5)PPSAPSQSR 110.44 0.0039699 587588470 13075.02 12845.78 11586.66 10451.49 12630.1 10866.2 12445.3 10159.4 9587.05 9853.98 TRUE FALSE 11962.92089 12009.51739 10800.1898 11256.46557 12127.01637 11481.43485 11615.09674 10070.57744 10583.65816 11074.76544 1.080196322 1.08440377 0.975207093 1.01640668 1.095013384 1.036720364 1.048789413 0.909326477 0.955655288 1 13.43498852 -7.747096351 24.99746389 0.949368168 1.046844725 0.543313542 0.03900563 167.4547205 291846.2354 0.019041264 0.010928237 1.79E-08 7.747096351 0.097476556 S(ph)RTPPSAPSQSR ddPTM_A459_MK2206_30min_R2 4 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.5)RT(0.5)PPSAPSQSR;S(0.5)RT(0.5)PPSAPSQSR;S(0.5)RT(0.5)PPSAPSQSR;S(0.5)RT(0.5)PPSAPSQSR 90.653 0.013261 688095900 8788.73 12002.77 9987.89 10969.1 11384.07 9774.68 12035 12324.5 11504.17 9459.7 TRUE FALSE 9461.601926 11406.7299 10320.88127 10072.88944 10937.07421 10146.6623 10454.79004 13935.35447 12504.78191 9151.030764 1.03393838 1.246496727 1.127838113 1.100738234 1.195174019 1.108799933 1.142471303 1.522818011 1.366488894 1 13.15971854 -7.628745051 17.87579597 1.333484613 1.140020114 0.219153736 0.132833409 1.863199251 306.2729 0.058571434 0.033815433 2.35E-08 7.628745051 -0.193464499 S(ph)RTPVQDHR ddPTM_A459_MK2206_30min_R2 2 SRTPVQDHR 9 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.5)RT(0.5)PVQDHR;S(0.63)RT(0.37)PVQDHR 92.247 0.014379 2177470 3628.6 2191.2 3065.54 3226.2 4129.52 3535.5 3274.9 5250.77 5261.1 4872.9 TRUE FALSE 3906.408406 2082.388194 3167.743574 2962.60914 3967.374296 3670.04593 2844.901696 5937.063668 5718.700968 4713.897672 0.828700298 0.44175507 0.67200092 0.628483974 0.841633521 0.778558676 0.603513673 1.259480812 1.213157639 1 12.20270473 -7.761214461 24.99999931 1.177239507 0.682552685 0.742060206 0.127521046 2.840816802 315888.0126 0.0646273 0.034282319 1.73E-08 7.761214461 -0.494686822 S(ph)RTSVQTEDDQLIAGQSAR ddPTM_A459_MK2206_30min_R1 1 SRTSVQTEDDQLIAGQSAR 19 1 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-3;P26232-2;P26232-5;P26232;P26232-6 G3XAM7;P26232-6 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 S(0.543)RT(0.229)S(0.229)VQTEDDQLIAGQSAR 237.09 5.95E-29 8853500 1038.6 1393.6 1152.2 960.98 1041.7 1169 1204.2 1020.9 981.68 911.44 TRUE FALSE 950.2616161 1302.876387 1073.991874 1034.994846 1000.206883 1235.18777 1123.870015 1011.974379 1083.729149 1024.356068 0.927667288 1.271897953 1.048455618 1.01038582 0.976425009 1.205818766 1.097147808 0.98791271 1.05796137 1 10.00050157 -7.753815174 24.95677848 1.017202777 1.081783771 0.075132527 0.097795726 446.8062505 1462572.485 0.046769311 0.026335796 1.76E-08 7.753815174 0.064580994 S(ph)SADDEIEETR ddPTM_A459_MK2206_30min_R2 1 SSADDEIEETR 11 0 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 S(0.98)S(0.02)ADDEIEETR 146.67 0.0029116 0 4483.4 4342 3362.4 4297.4 2880.7 3110.1 4013.9 4814.6 3527.8 5504.8 TRUE FALSE 4826.652551 4126.382594 3474.500738 3946.288673 2767.589244 3228.457035 3486.870108 5443.884751 3834.641667 5325.178827 0.906383186 0.774881507 0.65246649 0.741062188 0.519717616 0.606262651 0.654789299 1.022291444 0.720096318 1 12.37861426 -7.746663811 24.95225781 0.903395424 0.686964558 0.399302008 0.123522269 234.349323 395759.0784 0.059991637 0.034450573 1.79E-08 7.746663811 -0.216430866 S(ph)SAEAQTPEDTPNK ddPTM_A459_MK2206_30min_R1 1 SSAEAQTPEDTPNK 14 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 S(0.5)S(0.5)AEAQTPEDTPNK 262.83 2.67E-96 0 1690.6 1949.1 1612 1228.9 1506.4 1410.1 2197.3 1792.3 2851.2 3986.1 TRUE FALSE 1546.805592 1822.213236 1502.581931 1323.550091 1446.396898 1489.938643 2050.722126 1776.63011 3147.592443 4479.928162 0.345274642 0.406750548 0.335403131 0.295440026 0.322861628 0.332580923 0.457757815 0.39657558 0.702598865 1 12.12925988 -8.505560329 1.348455657 1.002922519 0.346482462 0.958905332 0.042913291 0.081511129 0.325880129 0.041822719 0.012685656 3.12E-09 8.505560329 -0.656440057 down S(ph)SAEAQTPEDTPNK ddPTM_A459_MK2206_30min_R2 1 SSAEAQTPEDTPNK 14 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 S(0.939)S(0.061)AEAQTPEDTPNK 328.41 2.36E-126 10461000 59500 32431 42425 27598 26954 27582 45820 28711 28531 41380 TRUE FALSE 64055.36575 30820.5237 43839.42833 25343.15512 25895.65053 28631.65234 39803.77896 32463.62628 31012.57481 40029.77399 1.60019304 0.769939988 1.095170518 0.633107624 0.646909736 0.715258906 0.994354327 0.810986999 0.774737694 1 15.28878585 -4.759236046 24.94527465 0.819287008 1.600194076 0.710578722 0.148021867 31.27200995 353963.8808 0.03742291 0.241304131 1.74E-05 4.759236046 0.780907068 S(ph)SATLWNSPSR ddPTM_A459_MK2206_30min_R2 1 SSATLWNSPSR 11 0 Q3KQU3-4;Q3KQU3;C9JIR3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 S(0.972)S(0.028)ATLWNSPSR 108.32 0.0085919 0 11105 12175 11146 10642 11926 12525 13678 9433.7 11035 6998.9 TRUE FALSE 11955.20734 11570.4072 11517.60208 9772.514558 11457.72532 13001.64765 11882.06217 10666.71698 11994.80435 6770.526466 1.765772189 1.708937593 1.701138329 1.443390644 1.692294591 1.920330379 1.754968721 1.575463449 1.771620628 1 12.7250523 -10.57751076 4.281653989 0.99994578 1.699949214 0.757675294 0.119383526 89764059.46 145181510.6 75197.76671 0.031613988 2.65E-11 10.57751076 0.700003434 S(ph)SDEDAAGEPK ddPTM_A459_MK2206_30min_R1 2 SSDEDAAGEPK 11 0 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 S(0.992)S(0.008)DEDAAGEPK;S(0.99)S(0.01)DEDAAGEPK 208.08 1.78E-05 41577000 8558.4 9415.8 9674.6 8321.3 5949.1 5001.1 7182.7 7481.4 5016.3 7784.4 TRUE FALSE 7830.463138 8802.829709 9017.915107 8962.207968 5712.13475 5284.25796 6703.555189 7415.990909 5537.762336 8748.790241 0.895033819 1.006176793 1.030761381 1.02439397 0.652905669 0.603998703 0.76622653 0.847659014 0.632974638 1 13.09486782 -6.254242778 24.99867242 0.736458894 0.993288303 0.509550432 0.114075937 436.4732676 1516166.014 0.033366537 0.042177219 5.57E-07 6.254242778 0.256829408 S(ph)SDEDAAGEPK ddPTM_A459_MK2206_30min_R2 2 SSDEDAAGEPK 11 0 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 S(0.986)S(0.014)DEDAAGEPK;S(0.999)S(0.001)DEDAAGEPK 190.35 1.98E-05 80886000 225260 226867 221945 186643 188243 136064 216769 169908 154115 213643 TRUE FALSE 242506.0788 215601.1147 229344.5355 171393.6699 180851.634 141242.0109 188306.9699 192115.559 167519.6441 206671.8464 1.173387101 1.043205054 1.109703811 0.829303424 0.875066619 0.683411956 0.911139922 0.929568116 0.810558608 1 17.65698235 -5.758899683 24.99976532 0.854847176 1.102209356 0.641151793 0.084165443 40.56101361 399256.5393 0.022902143 0.037430849 1.74E-06 5.758899683 0.24736218 S(ph)SDEENGPPSSPDLDR ddPTM_A459_MK2206_30min_R2 2 SSDEENGPPSSPDLDR 16 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 S(0.899)S(0.101)DEENGPPSSPDLDR;S(0.62)S(0.38)DEENGPPSSPDLDR 258.8 5.41E-39 18983000 43141 33971 33078 35540 22750 19581.2 15099.9 13166.8 14599.6 14853.1 TRUE FALSE 46443.90813 32284.04954 34180.80401 32636.26831 21856.72069 20326.37629 13117.26499 14887.74597 15869.44682 14368.44456 3.232354617 2.246871566 2.378879903 2.271384921 1.521161222 1.41465391 0.912921711 1.036141797 1.104465187 1 13.81061627 -6.038078472 0.640998099 0.92928899 3.046364478 0.91111831 0.2201202 0.282753081 0.225196247 0.138731655 0.356932309 9.16E-07 6.038078472 2.117075488 up S(ph)SDELDAWTDFR ddPTM_A459_MK2206_30min_R1 2 SSDELDAWTDFR 12 0 O43524;O43524-2 O43524 FOXO3 Forkhead box protein O3 1 S(0.998)S(0.002)DELDAWTDFR;S(0.955)S(0.045)DELDAWTDFR 211.38 4.98E-06 4378900 972.79 800.44 905.93 629.54 945.75 655.71 697.41 564.04 501.51 751.91 TRUE FALSE 890.0491022 748.3312105 844.4379957 678.0272799 908.0787748 692.8357335 650.8870514 559.1086577 553.6437592 845.0622874 1.05323491 0.88553379 0.999261248 0.802340005 1.074570228 0.81986351 0.770223759 0.661618281 0.655151422 1 9.722913873 -6.962487482 6.54894979 0.750249035 0.952158703 0.378967201 0.115781532 0.181713015 21.80978655 0.039523391 0.034484874 1.09E-07 6.962487482 0.201909669 S(ph)SDGEDEQQVPK ddPTM_A459_MK2206_30min_R2 1 SSDGEDEQQVPK 12 0 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 S(0.903)S(0.097)DGEDEQQVPK 148.89 0.00059074 6549600 37239 43602 42154 50055 40430 44278 45329 32113 29559 45305 TRUE FALSE 40090.04647 41436.78808 43559.39332 45965.34638 38842.51506 45963.03032 39377.24785 36310.27936 32129.98839 43826.70156 0.914740216 0.945469009 0.99390079 1.048797759 0.886275117 1.048744913 0.89847619 0.82849674 0.733114454 1 15.41952248 -7.518347985 5.019929851 0.838910606 0.972688 0.320206719 0.078062281 0.187241131 13.96738304 0.0347131 0.02099717 3.03E-08 7.518347985 0.133777394 S(ph)SDGGSEEPPDRR ddPTM_A459_MK2206_30min_R1 2 SSDGGSEEPPDRR 13 1 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 S(0.497)S(0.497)DGGS(0.005)EEPPDRR;S(0.681)S(0.318)DGGS(0.001)EEPPDRR 126.09 0.0010592 2106220 1033.66 878.85 852.15 749.45 768.054 541.56 927.1 721.43 377.1 534.009 TRUE FALSE 945.741789 821.6367053 794.3084322 807.1727689 737.4607828 572.2226592 865.2548506 715.1226136 416.3008945 600.1660665 1.575800169 1.369015596 1.323481077 1.344915706 1.228761211 0.953440541 1.44169239 1.191541231 0.693642839 1 9.229217941 -3.143383578 0.190826737 0.898700796 2.642717198 0.51197429 0.174094022 26.64476521 0.534017039 0.386647559 12.13361799 0.000718814 3.143383578 1.744016401 S(ph)SDGGSEEPPDRR ddPTM_A459_MK2206_30min_R2 2 SSDGGSEEPPDRR 13 1 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 S(0.5)S(0.5)DGGSEEPPDRR;S(0.499)S(0.499)DGGS(0.001)EEPPDRR 141.65 0.00041971 7430700 24286 28364 22632.2 25759 21491 16648.7 18835.3 14184.8 17279.7 15198.3 TRUE FALSE 26145.35483 26955.48501 23386.74625 23654.4073 20647.15536 17282.27794 16362.20248 16038.80206 18782.65707 14702.38072 1.778307564 1.833409536 1.590677503 1.60888279 1.404340954 1.175474794 1.112894762 1.090898296 1.277524874 1 13.84376217 -6.293729172 0.966716804 1.106570349 1.799691247 0.922447833 0.079390609 0.140387613 0.279118889 0.037820867 0.057543302 5.08E-07 6.293729172 0.693120897 S(ph)SDGSLSHEEDLAK ddPTM_A459_MK2206_30min_R2 1 SSDGSLSHEEDLAK 14 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YEF9;E9PJZ7 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 S(0.667)S(0.327)DGS(0.005)LSHEEDLAK 154.65 0.00034007 3812000 6328.6 6931.2 6781.6 7475.4 9182.8 6325.8 8228.3 6993.5 6821.7 6229.8 TRUE FALSE 6813.122482 6587.006687 7007.695159 6864.635907 8822.237132 6566.532752 7147.914326 7907.574462 7415.039135 6026.522136 1.130523099 1.093002985 1.162809163 1.139070886 1.463901888 1.08960568 1.186076175 1.312129 1.230401045 1 12.55710996 -6.038889983 24.99876995 1.228960213 1.129490409 0.097575559 0.11757583 1057.930483 680043.7631 0.033491783 0.043247469 9.14E-07 6.038889983 -0.099469804 S(ph)SDIVSSVR ddPTM_A459_MK2206_30min_R2 2 SSDIVSSVR 9 0 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.957)S(0.043)DIVSSVR;S(0.986)S(0.014)DIVSSVR 139.15 0.0024046 19752600 50331 44969 49379 56103 45826 50935 60913 39738 38435 56032 TRUE FALSE 54184.38006 42735.90485 51025.27121 51519.20544 44026.64098 52873.36712 52915.04993 44931.89304 41778.00683 54203.68043 0.999643929 0.788431791 0.941361745 0.950474304 0.812244494 0.975457141 0.976226144 0.828945427 0.770759596 1 15.72610319 -10.96357192 5.741248155 1.00006505 0.894228669 0.131291459 0.082000014 6.77E-05 6.59E-06 0.078686422 0.019072545 1.09E-11 10.96357192 -0.105836381 S(ph)SDKLNLVTK ddPTM_A459_MK2206_30min_R2 2 SSDKLNLVTK 10 1 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 S(0.932)S(0.068)DKLNLVTK;S(0.579)S(0.421)DKLNLVTK 73.36 0.035996 31160000 165522 149064 123275 130766 137558 114414 181715 132987 137749 178867 TRUE FALSE 178194.4916 141661.6985 127384.927 120081.9995 132156.7817 118768.1049 157855.6022 150368.8575 149730.159 173030.5844 1.029843898 0.81870901 0.736198906 0.693992914 0.763777006 0.68639949 0.912298844 0.869030513 0.865339267 1 17.40066754 -7.292927115 24.18708876 0.900753074 0.781792783 0.275596091 0.097132876 689.2596741 529446.778 0.042483307 0.028646213 5.09E-08 7.292927115 -0.118960291 S(ph)SDSEEAFETPESTTPVK ddPTM_A459_MK2206_30min_R1 2 SSDSEEAFETPESTTPVK 18 0 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 S(0.492)S(0.492)DS(0.015)EEAFETPESTTPVK;S(0.49)S(0.49)DS(0.019)EEAFETPESTTPVK 203.05 9.27E-11 6536500 3891.9 3964.6 3884.3 3324.7 4060.2 3895.2 4413.3 3860.1 3817.9 4173.2 TRUE FALSE 3560.873468 3706.503819 3620.644538 3580.76897 3898.473636 4115.742858 4118.89681 3826.351553 4214.784367 4690.207522 0.759214481 0.790264354 0.771958281 0.763456404 0.831194274 0.877518284 0.878190739 0.815817111 0.898634943 1 12.19543604 -14.52287874 0.049533038 1.803867638 0.424300484 0.852336669 0.027719734 218.9405839 0.799380617 22.96413131 5.184747877 3.00E-15 14.52287874 -1.379567154 S(ph)SDSEEAFETPESTTPVK ddPTM_A459_MK2206_30min_R2 2 SSDSEEAFETPESTTPVK 18 0 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 S(0.499)S(0.499)DS(0.002)EEAFETPESTTPVK;S(0.5)S(0.5)DSEEAFETPESTTPVK 251.02 5.20E-33 6268700 26977.4 28456.7 27983 37146 26322.7 31210 33606 28508 28016 25674.1 TRUE FALSE 29042.81049 27043.58166 28915.93925 34111.05298 25289.13854 32397.71842 29193.49183 32234.09348 30452.78104 24836.35622 1.169366804 1.088870743 1.164258517 1.373432265 1.018230626 1.304447324 1.17543377 1.297859203 1.226137231 1 14.60016591 -5.52800848 24.98257838 1.212318566 1.128480204 0.050253247 0.113711873 311.5363613 1517223.67 0.028760834 0.050034363 2.96E-06 5.52800848 -0.083838363 S(ph)SDSWEVWGSASTNR ddPTM_A459_MK2206_30min_R1 1 SSDSWEVWGSASTNR 15 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 S(0.971)S(0.029)DSWEVWGSASTNR 86.777 0.019338 5206100 665.04 610.86 629.62 511.83 570.3 606.27 501.32 589.38 584 537.06 TRUE FALSE 608.4748557 571.092903 586.8831486 551.2512353 547.5837434 640.5964835 467.8778575 584.2271128 644.7088899 603.5950474 1.008084573 0.9461524 0.97231273 0.913279918 0.907203838 1.061301756 0.775151916 0.96791237 1.068114943 1 9.237437158 -8.013014541 24.87627081 1.028709565 0.939063449 0.207804861 0.0719623 885.8554821 1693233.943 0.043342103 0.018030872 9.70E-09 8.013014541 -0.089646116 S(ph)SDTEENVK ddPTM_A459_MK2206_30min_R2 2 SSDTEENVK 9 0 H0YBT0;A0A087WUS5;P01106;P01106-2;A0A494C1T8 H0YBT0 MYC Myc proto-oncogene protein 1 S(0.919)S(0.081)DTEENVK;S(0.991)S(0.009)DTEENVK 141.89 0.00062997 0 87210 54040 58912 57626 71808 40612 84802 90803 65893 91609 TRUE FALSE 93886.86465 51356.45218 60876.09668 52917.77146 68988.45711 42157.51812 73667.39553 102671.2639 71624.25403 88619.80583 1.05943433 0.579514384 0.686935568 0.597132559 0.778476735 0.475712147 0.831274621 1.15855889 0.808219487 1 16.43534155 -7.524399332 24.87695177 0.989016935 0.686694295 0.386710772 0.165207243 45.85269848 750103.3025 0.072729855 0.04239293 2.99E-08 7.524399332 -0.30232264 S(ph)SDTSGSPATPLK ddPTM_A459_MK2206_30min_R2 1 SSDTSGSPATPLK 13 0 Q7Z5R6 Q7Z5R6 APBB1IP Amyloid beta A4 precursor protein-binding family B member 1-interacting protein 1 S(0.875)S(0.123)DT(0.002)SGSPATPLK 97.551 0.01665 0 11835 15396 14677 12378 18910 15244 18179 10690 11905 14429 TRUE FALSE 12741.0967 14631.45703 15166.32385 11366.6778 18167.49838 15824.1211 15792.07546 12087.2197 12940.47538 13958.18291 0.912804824 1.048235083 1.086554314 0.814337932 1.301566149 1.133680595 1.131384763 0.8659594 0.927088824 1 13.76882352 -7.764069684 24.99998456 0.922393077 1.064233273 0.179877324 0.126894152 117.1560807 1113475.356 0.06705144 0.03452258 1.72E-08 7.764069684 0.141840195 S(ph)SEDLAGPLPSSVSSSSTTSSKPK ddPTM_A459_MK2206_30min_R1 4 SSEDLAGPLPSSVSSSSTTSSKPK 24 1 Q9NRF2-2;Q9NRF2-3;Q9NRF2 Q9NRF2-2 SH2B1 SH2B adapter protein 1 1 S(0.827)S(0.173)EDLAGPLPSSVSSSSTTSSKPK;S(0.501)S(0.499)EDLAGPLPSSVSSSSTTSSKPK;S(0.5)S(0.5)EDLAGPLPSSVSSSSTTSSKPK;S(0.827)S(0.173)EDLAGPLPSSVSSSSTTSSKPK 170.1 3.40E-16 88979500 7619.25 10312.85 10426.85 8729.91 8164.24 7824.94 9558.02 9058.09 10198.24 9625.08 TRUE FALSE 6971.192777 9641.481591 9719.104473 9402.289181 7839.041033 8267.981341 8920.421925 8978.896074 11258.38354 10817.50758 0.644436135 0.89128494 0.898460612 0.869173339 0.724662403 0.764314819 0.824628212 0.830033722 1.040755781 1 13.40108051 -8.223664997 5.399723058 1.021475048 0.809464585 0.568109697 0.074827678 0.134762696 10.62332187 0.057431527 0.019725602 5.97E-09 8.223664997 -0.212010462 S(ph)SEDLAGPLPSSVSSSSTTSSKPK ddPTM_A459_MK2206_30min_R2 2 SSEDLAGPLPSSVSSSSTTSSKPK 24 1 Q9NRF2-2;Q9NRF2-3;Q9NRF2 Q9NRF2-2 SH2B1 SH2B adapter protein 1 1 S(0.971)S(0.029)EDLAGPLPSSVSSSSTTSSKPK;S(0.795)S(0.205)EDLAGPLPSSVSSSSTTSSKPK 216.58 1.94E-34 124281000 94482 120223 97462 113202 121093 91824 131936 107165 96070 126991 TRUE FALSE 101715.6146 114252.9006 100711.3344 103953.0345 116338.2804 95318.42666 114612.6447 121171.8335 104425.9949 122847.2941 0.827984168 0.930040027 0.819809139 0.846197185 0.947015408 0.775909859 0.932968411 0.986361437 0.850047172 1 16.90650655 -8.782921964 0.343171457 1.013080039 0.853336202 0.287770714 0.061649735 2.871547852 0.807256983 0.149628844 0.064486239 1.65E-09 8.782921964 -0.159743837 S(ph)SEGSLGGQNSGIGGR ddPTM_A459_MK2206_30min_R1 2 SSEGSLGGQNSGIGGR 16 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 S(0.842)S(0.157)EGS(0.001)LGGQNSGIGGR;S(0.853)S(0.147)EGSLGGQNSGIGGR 197.1 1.24E-20 0 3147.9 2803.6 2991.1 2586.1 2511.12 2582 3343.2 2658.36 2246.05 1884.93 TRUE FALSE 2880.154575 2621.08513 2788.072466 2785.28187 2411.096773 2728.190609 3120.181228 2635.118239 2479.534935 2118.449359 1.359557906 1.23726589 1.316091156 1.314773874 1.138142275 1.287824322 1.472860899 1.243890125 1.170448057 1 11.04879293 -8.533489635 2.166734151 1.002650223 1.296785684 0.56535107 0.081558322 0.247111022 2.689046609 0.080921457 0.022370079 2.93E-09 8.533489635 0.294135461 S(ph)SEGSLGGQNSGIGGR ddPTM_A459_MK2206_30min_R2 1 SSEGSLGGQNSGIGGR 16 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 S(0.977)S(0.023)EGSLGGQNSGIGGR 166.9 1.56E-05 5086700 8021.9 9525.8 8330.5 11232 10498 10168 11236 5793.6 7356 7061.1 TRUE FALSE 8636.062832 9052.762624 8608.234712 10314.30967 10085.79577 10554.95037 9760.699703 6550.843412 7995.811583 6830.696885 1.264301868 1.325305862 1.260227888 1.50999376 1.476539794 1.545223063 1.428946397 0.959030026 1.1705704 1 12.73781706 -7.754908443 24.99991208 1.048600137 1.405727203 0.712344159 0.104299822 86.04265335 329368.1747 0.054781662 0.030665979 1.76E-08 7.754908443 0.357127066 S(ph)SEHSMVKEAALY(ph)T(ph)LGAIAEK ddPTM_A459_MK2206_30min_R1 1 SSEHSMVKEAALYTLGAIAEK 21 1 Q8NA31;J3KSG9;A0A669KAY0;Q8NA31-3;Q8NA31-2 Q8NA31 CCDC79 Telomere repeats-binding bouquet formation protein 1 3 S(0.47)S(0.47)EHS(0.062)MVKEAALY(0.999)T(0.999)LGAIAEK 53.278 0.03524 0 695.79 985.97 943.83 985.63 981.2 1017.1 1011.5 833.65 711.78 817.62 TRUE FALSE 636.6094068 921.7831738 879.7654493 1061.543393 942.1167263 1074.687323 944.0246806 826.3614859 785.7720781 918.9129383 0.692785334 1.003123512 0.957398043 1.155216505 1.025251345 1.169520287 1.027327662 0.899281587 0.855110474 1 9.843784371 -4.758140835 5.175801283 1.017131722 0.673007943 0.511264387 0.092991517 0.151094956 11.29756113 0.025073588 0.188866092 1.75E-05 4.758140835 -0.344123779 S(ph)SELLVR ddPTM_A459_MK2206_30min_R2 3 SSELLVR 7 0 Q9NSK0-5;Q9NSK0;Q9NSK0-3 Q9NSK0-5 KLC4 Kinesin light chain 4 1 S(0.99)S(0.01)ELLVR;S(0.986)S(0.014)ELLVR;S(0.995)S(0.005)ELLVR 141.2 0.0031404 6656900 20640.5 23643 25987.3 27880.5 27363.3 28176 28711 23535 18087.6 24477 TRUE FALSE 22220.75255 22468.923 26853.70361 25602.57396 26288.87935 29248.25742 24941.21121 26611.10531 19660.82675 23678.31749 0.938443053 0.948923968 1.134105226 1.081266605 1.110251155 1.235233772 1.05333545 1.123859637 0.830330396 1 14.53127895 -3.872294272 15.22523251 1.057061767 1.045539883 0 0.112249332 0 0 0.026090104 0 0.000134186 3.872294272 -0.011521884 S(ph)SEMLVK ddPTM_A459_MK2206_30min_R1 2 SSEMLVK 7 0 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 S(0.994)S(0.006)EMLVK;S(0.988)S(0.012)EMLVK 107.69 0.016587 14406900 4396.3 4740.1 5118.3 4881.7 6050.3 4774.8 5932.5 5778.8 4911.1 4991.6 TRUE FALSE 4022.371599 4431.518628 4770.884056 5257.68938 5809.303739 5045.14505 5536.753749 5728.276561 5421.62642 5609.997093 0.717000657 0.789932429 0.850425406 0.937200019 1.03552705 0.899313309 0.986944139 1.021083695 0.966422323 1 12.45378431 -5.430407321 1.225011092 0.984875172 0.711266766 0.867430328 0.036462909 0.212374863 0.532548347 0.012144109 0.055140845 3.71E-06 5.430407321 -0.273608406 S(ph)SEMLVK ddPTM_A459_MK2206_30min_R2 2 SSEMLVK 7 0 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 S(0.992)S(0.008)EMLVK;S(0.991)S(0.009)EMLVK 127.68 0.0052617 8691500 43231 52828 45290 47745 61518 37888 62164 51533 44409 54483 TRUE FALSE 46540.7986 50204.63834 46799.946 43844.08077 59102.49422 39329.85439 54001.79213 58268.54004 48271.61455 52705.22417 0.883039572 0.952555257 0.887956493 0.831873528 1.121378291 0.746223074 1.024600369 1.105555302 0.915879124 1 15.68565835 S(ph)SEYPISQNPEGLSADKFEVSADSSTSK ddPTM_A459_MK2206_30min_R1 2 SSEYPISQNPEGLSADKFEVSADSSTSK 28 1 P38398-8;P38398-4;P38398;P38398-7;H0Y8B8;B7ZA85;E7EUM2;A0A2R8Y7V5;P38398-6;P38398-5;P38398-3;H0Y881 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 S(0.821)S(0.168)EY(0.009)PIS(0.002)QNPEGLSADKFEVSADSSTSK;S(0.818)S(0.181)EY(0.001)PIS(0.001)QNPEGLSADKFEVSADSSTSK 142.9 3.11E-13 9436900 1145.36 1191.66 1216.64 934.91 737.19 634.86 899.43 901.41 1146.86 868.71 TRUE FALSE 1047.941117 1114.082717 1134.057867 1006.91693 707.8261613 670.8052246 839.4306658 893.5290674 1266.080201 976.3323532 1.07334466 1.141089624 1.161548998 1.031325989 0.724984847 0.687066471 0.859779626 0.915189448 1.296771736 1 9.931228529 -6.01710653 10.34177274 0.894032027 1.121957133 0.261753945 0.15835358 0.570535749 338.995903 0.049151264 0.066394115 9.61E-07 6.01710653 0.227925106 S(ph)SFSQHAR ddPTM_A459_MK2206_30min_R1 1 SSFSQHAR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.5)S(0.5)FSQHAR 72.325 0.043826 1238500 1780.1 734.66 1050.7 671.08 1230.3 1338.3 1512.3 1416.8 274.91 739.64 TRUE FALSE 1628.693147 686.8335005 979.3814114 722.7666979 1181.294546 1414.073389 1411.417226 1404.413067 303.4878783 831.2721872 1.959277806 0.826243812 1.178171755 0.869470565 1.42106829 1.701095515 1.697900216 1.689474385 0.365088455 1 9.699177132 S(ph)SFSQHAR ddPTM_A459_MK2206_30min_R2 3 SSFSQHAR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.978)S(0.022)FSQHAR;S(0.992)S(0.008)FSQHAR;S(0.5)S(0.5)FSQHAR 138.08 0.00093126 9115400 45683 85893 54005 103917 95992 117878 93289 83967 91108 59791 TRUE FALSE 49180.5256 81627.67852 55805.49975 95426.64869 92222.87176 122363.9299 81040.04224 94941.7752 99032.40915 57840.02457 0.850285351 1.411266318 0.964824966 1.649837624 1.594447313 2.115558055 1.401106636 1.641454614 1.712177854 1 15.81978054 -5.769844124 24.99999992 1.629013111 1.109039615 0.380630967 0.295316307 172.1634698 512102.894 0.078608926 0.118767223 1.70E-06 5.769844124 -0.519973496 S(ph)SFSSDPDEK ddPTM_A459_MK2206_30min_R2 1 SSFSSDPDEK 10 0 P46013 P46013 MKI67 Antigen KI-67 1 S(0.863)S(0.137)FSSDPDEK 150.09 0.00072349 16208000 184110 161640 156470 153790 120900 121450 194660 150350 107530 195710 TRUE FALSE 198205.6032 153613.1926 161686.6317 141224.8651 116152.8585 126071.8649 169100.9082 170001.2612 116882.765 189323.9987 1.046912195 0.811377288 0.854020794 0.745942754 0.613513655 0.665905356 0.893182636 0.897938256 0.617368986 1 17.53049777 -3.994261182 1.287958679 0.771617027 2.368847772 0.28423392 0.122363697 11.57974772 3.747128384 0.035978129 39.83457636 0.00010133 3.994261182 1.597230745 S(ph)SFYVNGLTLGGQK ddPTM_A459_MK2206_30min_R2 1 SSFYVNGLTLGGQK 14 0 P07737;K7EJ44;I3L3D5 P07737 PFN1 Profilin-1 1 S(0.898)S(0.013)FY(0.001)VNGLT(0.087)LGGQK 134.06 0.00067574 11069000 40714 45271 41616 41832 36582 40292 54178 43453 36941 40462 TRUE FALSE 43831.09514 43022.90797 43003.45667 38414.19179 35145.60687 41825.34029 47064.36352 49132.4563 40154.06141 39141.72825 1.119804799 1.099157086 1.098660141 0.981412766 0.897906363 1.068561409 1.202408928 1.255244939 1.025863272 1 15.25641984 -7.014773052 24.34207066 1.14119764 1.036826073 0.131081699 0.093250091 805.5173623 1327278.053 0.036392338 0.029266751 9.67E-08 7.014773052 -0.104371568 S(ph)SGDPEQIKEDSLSEESADAR ddPTM_A459_MK2206_30min_R2 1 SSGDPEQIKEDSLSEESADAR 21 1 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 S(0.781)S(0.157)GDPEQIKEDS(0.029)LS(0.029)EES(0.004)ADAR 50.77 0.032005 3613700 15221 20639 15119 15510 17078 13538 22248 16375 16707 16957 TRUE FALSE 16386.33146 19614.09727 15623.05991 14242.78339 16407.43191 14053.19808 19326.81088 18515.26872 18160.14466 16403.69448 0.998941518 1.195712179 0.952411052 0.868266804 1.000227841 0.856709328 1.178198661 1.128725529 1.107076499 1 14.00173316 -7.27962729 24.89487035 1.114227297 0.983337447 0.282849141 0.096574187 1087.195101 1488102.034 0.042500173 0.028717675 5.25E-08 7.27962729 -0.130889851 S(ph)SGFISELPSEEGK ddPTM_A459_MK2206_30min_R1 3 SSGFISELPSEEGK 14 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.95)S(0.05)GFISELPSEEGK;S(0.949)S(0.051)GFISELPSEEGK;S(0.886)S(0.114)GFISELPSEEGK 353.65 1.94E-166 63588000 8532.4 9750.5 9791.4 8613.9 8716.5 7781.3 9000.2 8719.4 8252.2 7521.9 TRUE FALSE 7806.674575 9115.740678 9126.787048 9277.344071 8369.303348 8221.870482 8399.81308 8643.167205 9110.045721 8453.769759 0.923454837 1.07830482 1.0796115 1.097420954 0.990008432 0.972568536 0.993617442 1.022403904 1.077631161 1 13.04537911 -6.292864341 24.98878095 1.007863915 1.049592358 0.097101692 0.051799682 1473.835273 1171971.811 0.016589676 0.018812239 5.09E-07 6.292864341 0.041728443 S(ph)SGFISELPSEEGK ddPTM_A459_MK2206_30min_R2 3 SSGFISELPSEEGK 14 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.5)S(0.5)GFISELPSEEGK;S(0.994)S(0.006)GFISELPSEEGK;S(0.935)S(0.065)GFISELPSEEGK 290.17 1.32E-66 45723000 190499 236026 215440 228576 194943 158307 210305 151759 156996 186268 TRUE FALSE 205083.7499 224305.2921 222622.6621 209900.6096 187288.5583 164331.4838 182691.7009 171594.4224 170651.2283 180190.0904 1.138152212 1.244825903 1.23548782 1.164884313 1.03939433 0.911989574 1.013883174 0.952296666 0.947062227 1 17.45916015 -6.315405187 2.546455593 0.965259836 1.208850152 0.888537502 0.038682878 0.083801271 1.069483815 0.012510429 0.015252529 4.84E-07 6.315405187 0.243590317 S(ph)SGFLNLIK ddPTM_A459_MK2206_30min_R2 2 SSGFLNLIK 9 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.992)S(0.008)GFLNLIK;S(0.987)S(0.013)GFLNLIK 132.32 0.0033907 2947100 9702.9 14271.2 13396 15937.7 13185 13450 13087.1 10183.7 10845 11448.5 TRUE FALSE 10445.76148 13562.51296 13842.61595 14635.53893 12667.29065 13961.84917 11368.74805 11514.74456 11788.2785 11074.93638 0.943189299 1.224613171 1.249904783 1.321500948 1.143779992 1.260670824 1.026529423 1.039712027 1.064410493 1 13.43501079 -7.273217799 24.70518692 1.035972305 1.198671633 0.390642243 0.09629068 692.6478896 1452819.476 0.040540371 0.027586122 5.33E-08 7.273217799 0.162699329 S(ph)SGGGYGGGPAGGHGGNR ddPTM_A459_MK2206_30min_R1 1 SSGGGYGGGPAGGHGGNR 18 0 Q9H2U1-3;Q9H2U1-2;Q9H2U1 Q9H2U1-3 DHX36 ATP-dependent RNA helicase DHX36 1 S(0.878)S(0.122)GGGYGGGPAGGHGGNR 115.38 0.001064 659480 400.85 301.44 239.49 282.49 386.79 390.21 386.74 444.93 308.15 246.2 TRUE FALSE 366.7556026 281.8162012 223.2340861 304.2474287 371.3833353 412.303353 360.9412802 441.0400239 340.1832952 276.7011147 1.325457626 1.018485963 0.806769739 1.099552595 1.342182288 1.490067553 1.304444619 1.593922108 1.229425099 1 8.112184646 -6.226508989 4.249928485 1.365112929 1.035263763 0.305547102 0.190082989 0.22093334 9.237135612 0.056797571 0.072055524 5.94E-07 6.226508989 -0.329849166 S(ph)SGGREDLESSGLQR ddPTM_A459_MK2206_30min_R1 1 SSGGREDLESSGLQR 15 1 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 S(0.5)S(0.5)GGREDLESSGLQR 161.82 0.00055578 9360000 2446 2080.9 2344.5 1956.6 2165.2 1984.8 2338.9 1973.1 1793.3 1677.8 TRUE FALSE 2237.954856 1945.433032 2185.361872 2107.297671 2078.955499 2097.177661 2182.876249 1955.849395 1979.719952 1885.658531 1.186829333 1.031699536 1.158938289 1.117539383 1.102508999 1.112172552 1.157620117 1.037223528 1.049882532 1 10.88085273 -7.784952404 19.31522096 1.032663008 1.120183829 0.525494384 0.041160945 15.04872597 12359.33467 0.021000608 0.010119545 1.64E-08 7.784952404 0.087520821 S(ph)SGGREDLESSGLQR ddPTM_A459_MK2206_30min_R2 1 SSGGREDLESSGLQR 15 1 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 S(0.51)S(0.49)GGREDLESSGLQR 136.57 0.0019233 19115000 26834 37623 33366 32406 34938 24651 40149 24618 27176 30331 TRUE FALSE 28888.43167 35754.69653 34478.40579 29758.32614 33566.15857 25589.11108 34877.38807 27835.65713 29539.71936 29341.30195 0.984565433 1.218579073 1.175080978 1.014212873 1.143990087 0.872119142 1.188678953 0.948685139 1.006762393 1 14.84064527 -6.246127774 1.580503105 1.015896242 1.126588748 0.150518748 0.102505162 0.682091251 3.388150298 0.036021592 0.049506402 5.67E-07 6.246127774 0.110692506 S(ph)SGPYGGGGQYFAK ddPTM_A459_MK2206_30min_R1 4 SSGPYGGGGQYFAK 14 0 F8W6I7;P09651-2;P09651;P09651-3;Q32P51;H0YH80 F8W6I7 HNRNPA1;HNRNPA1L2 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2" 1 S(0.932)S(0.068)GPYGGGGQYFAK;S(0.899)S(0.101)GPYGGGGQYFAK;S(0.923)S(0.077)GPYGGGGQYFAK;S(0.85)S(0.15)GPYGGGGQYFAK 162.67 0.00027391 31423200 6462.4 6555.9 6506.1 4932.8 5579.6 5447.4 6112.3 5142.2 6855.1 6984.9 TRUE FALSE 5912.738945 6129.109718 6064.484059 5312.725111 5357.352717 5755.82708 5704.55962 5097.242288 7567.712176 7850.242145 0.753191919 0.780754225 0.77252191 0.676759393 0.682444263 0.733203763 0.726673078 0.649310199 0.964010031 1 12.93852144 -8.309980101 7.421105344 0.985919923 0.723307843 0.86666181 0.040817467 0.108456835 14.21668429 0.041518476 0.01093183 4.90E-09 8.309980101 -0.26261208 S(ph)SGPYGGGGQYFAK ddPTM_A459_MK2206_30min_R2 2 SSGPYGGGGQYFAK 14 0 F8W6I7;P09651-2;P09651;P09651-3;Q32P51;H0YH80 F8W6I7 HNRNPA1;HNRNPA1L2 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2" 1 S(0.899)S(0.101)GPYGGGGQYFAK;S(0.999)S(0.001)GPYGGGGQYFAK 175.15 8.94E-10 0 39805 29974 32133 34151 30517 28264 37536 28386 24497 36660 TRUE FALSE 42852.5014 28485.53475 33204.29818 31360.75406 29318.74924 29339.60633 32607.47811 32096.14766 26627.70478 35463.7872 1.208345323 0.803228786 0.93628743 0.884303582 0.826723584 0.827311707 0.91945843 0.905040048 0.750842109 1 15.11405899 -4.754416626 24.99992908 0.870584739 1.208345906 0.681055943 0.068920735 135.1027767 480903.3461 0.016148978 0.158192719 1.76E-05 4.754416626 0.337761166 S(ph)SGPYGGGGQYFAKPR ddPTM_A459_MK2206_30min_R1 1 SSGPYGGGGQYFAKPR 16 1 F8W6I7;P09651-2;P09651;P09651-3;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 S(0.861)S(0.139)GPYGGGGQYFAKPR 172.85 2.65E-05 33646000 5556.7 5043.2 5507 4695.6 5491.4 4796.8 5532.7 5183.9 4579.7 3818.4 TRUE FALSE 5084.073486 4714.886763 5133.200183 5057.255926 5272.66591 5068.390671 5163.623678 5138.577709 5055.776204 4291.452219 1.184697679 1.09866929 1.196145249 1.178448615 1.228643741 1.181043249 1.203234573 1.197398327 1.178103808 1 12.06725022 -8.604984796 18.6629156 1 1.183329032 0.75070562 0.031638651 3421.058763 777615.5221 0.031968576 0.008254251 2.48E-09 8.604984796 0.183329032 S(ph)SGPYGGGGQYFAKPR ddPTM_A459_MK2206_30min_R2 2 SSGPYGGGGQYFAKPR 16 1 F8W6I7;P09651-2;P09651;P09651-3;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 S(0.942)S(0.058)GPYGGGGQYFAKPR;S(0.984)S(0.016)GPYGGGGQYFAKPR 139.21 0.0019116 29854000 60871 82542 67453 80506 81289 81959 83338 57083 70013 72326 TRUE FALSE 65531.33056 78443.08431 69701.84935 73928.40227 78097.18542 85078.00718 72395.62049 64543.9441 76102.60419 69966.00854 0.936616679 1.121159917 0.996224464 1.056633125 1.116216103 1.215990578 1.034725605 0.922504305 1.087708242 1 16.09436657 -11.00880917 5.769696357 0.999938718 1.056670328 0.035369393 0.084023554 6.84E-05 6.09E-06 0.084021144 0.020356121 9.80E-12 11.00880917 0.05673161 S(ph)SGREEDDEELLR ddPTM_A459_MK2206_30min_R2 1 SSGREEDDEELLR 13 1 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 S(0.61)S(0.39)GREEDDEELLR 149.32 0.0024803 13437000 23438 29711 29149 26576 32109 22940 28012 26299 22112 27396 TRUE FALSE 25232.4313 28235.59494 30120.81311 24404.65579 30848.23933 23812.99777 24333.99075 29736.3696 24035.26179 26502.07076 0.95209282 1.065410895 1.136545645 0.920858449 1.163993546 0.898533476 0.918192053 1.122039476 0.906920142 1 14.69381747 -6.784404712 24.99986768 0.973580484 1.046640056 0.156372109 0.091021447 495.1048808 538963.3668 0.031234735 0.027563367 1.64E-07 6.784404712 0.073059572 S(ph)SGRNSPSAASTSSNDSK ddPTM_A459_MK2206_30min_R1 2 SSGRNSPSAASTSSNDSK 18 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 S(0.476)S(0.476)GRNS(0.047)PS(0.001)AASTSSNDSK;S(0.482)S(0.462)GRNS(0.052)PS(0.004)AASTSSNDSK 132.83 0.0002557 20881900 3015.1 2714.8 2302.9 2237 1653.8 1617.01 2508.58 2033.8 498.95 1728.09 TRUE FALSE 2758.649912 2538.066027 2146.585564 2409.294128 1587.925644 1708.563709 2341.237205 2016.018701 550.817638 1942.178836 1.420389236 1.30681376 1.10524609 1.240510958 0.817600117 0.879714925 1.205469426 1.038019087 0.283608094 1 10.92346033 -4.805074494 0.387953856 0.811312696 1.879673852 0.418221127 0.233300003 6.135922447 0.742026354 0.20483456 3.077563036 1.57E-05 4.805074494 1.068361156 S(ph)SGRNSPSAASTSSNDSK ddPTM_A459_MK2206_30min_R2 3 SSGRNSPSAASTSSNDSK 18 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 S(0.406)S(0.406)GRNS(0.179)PS(0.008)AASTSSNDSK;S(0.496)S(0.496)GRNS(0.008)PSAASTSSNDSK;S(0.476)S(0.476)GRNS(0.048)PSAASTSSNDSK 131.56 0.00028974 82601400 13355.2 20572.1 14305.4 17952.8 17579.9 17416.1 21107.1 14457.7 16439.5 19028 TRUE FALSE 14377.68438 19550.51943 14782.3349 16485.99881 16889.62479 18078.88189 18335.71242 16347.37103 17869.37799 18407.11792 0.781093729 1.062117357 0.803077101 0.895631727 0.917559439 0.982167984 0.996120767 0.888100522 0.970786305 1 14.16797613 -6.572619504 4.226905821 0.962001989 0.893366511 0.202041852 0.076052541 0.409265018 15.54385971 0.024601333 0.025070754 2.68E-07 6.572619504 -0.068635478 S(ph)SGSEGSSPNWLQALK ddPTM_A459_MK2206_30min_R1 2 SSGSEGSSPNWLQALK 16 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(0.848)S(0.151)GS(0.001)EGSSPNWLQALK;S(0.938)S(0.014)GS(0.048)EGSSPNWLQALK 246.75 1.91E-78 0 2406.1 2278.4 2111.83 2059.77 1939.55 1803.57 2186.77 2200.7 2436.2 2431.5 TRUE FALSE 2201.44856 2130.075746 1968.484863 2218.413842 1862.293616 1905.686575 2040.894563 2181.459512 2689.451708 2732.732577 0.805585068 0.779467323 0.720335711 0.811793244 0.681476714 0.697355676 0.746832888 0.798270394 0.984162055 1 11.41612857 -8.212374999 2.895415506 1.004666266 0.747517493 0.849815638 0.040311854 0.098515239 1.517080466 0.037521139 0.011216447 6.13E-09 8.212374999 -0.257148773 S(ph)SGSEGSSPNWLQALK ddPTM_A459_MK2206_30min_R2 2 SSGSEGSSPNWLQALK 16 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(0.968)S(0.006)GS(0.026)EGSSPNWLQALK;S(0.785)S(0.03)GS(0.186)EGSSPNWLQALK 207.21 4.43E-29 2405000 19904.7 22145.6 18308.2 21615.5 23215 17798.2 27561 21316.2 20951 22799 TRUE FALSE 21428.61914 21045.88171 18918.58625 19849.44451 22303.46245 18475.52297 23942.20759 24102.30053 22773.28011 22055.0705 0.971596039 0.954242323 0.857788519 0.899994607 1.011262352 0.837699566 1.085564773 1.092823554 1.032564376 1 14.42882275 -7.278075573 24.99017506 1.060473482 0.923683544 0.581399869 0.05413698 571.9726335 859189.3431 0.022323272 0.015096521 5.27E-08 7.278075573 -0.136789938 S(ph)SGSPEPSPAIAK ddPTM_A459_MK2206_30min_R1 1 SSGSPEPSPAIAK 13 0 Q66K64;K7ELE9 Q66K64 DCAF15 DDB1- and CUL4-associated factor 15 1 S(0.589)S(0.006)GS(0.405)PEPSPAIAK 150.51 0.00049052 25475000 8323.7 8584 8703 8232.2 8221.2 8114.9 8142.1 8744.2 7631.1 6662.9 TRUE FALSE 7615.725606 8025.18004 8112.264608 8866.24547 7893.732195 8574.358625 7598.955365 8667.750381 8424.380153 7488.350354 1.017009788 1.071688644 1.083317984 1.184005161 1.054134999 1.14502637 1.014770277 1.157497976 1.124998131 1 12.87043222 -4.842285302 2.064406425 1.101498899 1.000522263 0.142385882 0.057216832 1.074139727 5.726379302 0.014497915 0.197315203 1.44E-05 4.842285302 -0.100976636 S(ph)SGSPYGGGYGSGGGSGGYGSR ddPTM_A459_MK2206_30min_R1 2 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 S(0.879)S(0.077)GS(0.043)PYGGGYGSGGGSGGYGSR;S(0.899)S(0.01)GS(0.091)PYGGGYGSGGGSGGYGSR 334.98 4.33E-162 127858500 2745.1 2224.5 2489.1 1917.88 2564.7 2103.3 2631 2147.4 1690.04 2234.41 TRUE FALSE 2511.61483 2079.684646 2320.146827 2065.59545 2462.542568 2222.387028 2455.490791 2128.625508 1865.725706 2511.22558 1.000155004 0.828155249 0.92391016 0.822544763 0.980613844 0.884981041 0.977805742 0.847644085 0.742954245 1 11.29417591 -10.87126394 5.885902025 1.000015934 0.890939626 0.151612542 0.078122762 1.58E-05 1.75E-06 0.073315373 0.017778993 1.35E-11 10.87126394 -0.109076308 S(ph)SGSPYGGGYGSGGGSGGYGSR ddPTM_A459_MK2206_30min_R2 2 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 S(0.744)S(0.128)GS(0.128)PYGGGYGSGGGSGGYGSR;S(0.731)S(0.018)GS(0.251)PYGGGYGSGGGSGGYGSR 301.93 4.93E-107 354284800 60562.5 63655 59521.6 71306.5 59356.6 63770 65088.8 56851.6 50040.9 60152.9 TRUE FALSE 65199.21156 60493.98526 61506.02044 65480.53085 57025.96164 66196.81204 56542.56237 64282.29932 54393.36703 58190.1158 1.120451655 1.03959211 1.056983984 1.125286141 0.979993954 1.137595468 0.971686713 1.104694473 0.934752686 1 15.8284865 -8.264349347 24.9909259 0.967376338 1.063999729 0.328264924 0.056892412 286.6170529 2461407.655 0.043019955 0.013046946 5.44E-09 8.264349347 0.096623391 S(ph)SIDSQASLSGPLSGGAPGAGAR ddPTM_A459_MK2206_30min_R1 1 SSIDSQASLSGPLSGGAPGAGAR 23 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(0.901)S(0.085)IDS(0.014)QASLSGPLSGGAPGAGAR 336.66 4.43E-163 11417000 492.79 767.45 702.5 428.9 587.39 520.84 771.23 428 590.19 648.97 TRUE FALSE 450.8756228 717.4888655 654.8162573 461.9339523 563.9930125 550.3295107 719.7826539 424.2580411 651.5423625 729.3693031 0.61817192 0.983711355 0.897784229 0.633333416 0.773261241 0.75452793 0.986856248 0.58167795 0.893295563 1 9.510505672 -8.522988519 24.99999642 1.000000014 0.787263149 0.212283485 0.13655158 15.65628835 3565859.47 0.127537799 0.032930118 3.00E-09 8.522988519 -0.212736865 S(ph)SIDSQASLSGPLSGGAPGAGAR ddPTM_A459_MK2206_30min_R2 2 SSIDSQASLSGPLSGGAPGAGAR 23 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(0.5)S(0.5)IDS(0.001)QASLSGPLSGGAPGAGAR;S(0.861)S(0.139)IDSQASLSGPLSGGAPGAGAR 301.03 1.85E-107 26208000 56648 54910 50489 61155 58686 53427 65403 49749 40789.6 56497 TRUE FALSE 60985.01443 52183.24925 52172.27806 56158.44087 56381.69277 55460.20192 56815.50754 56251.36511 44337.40568 54653.50752 1.115848135 0.954801469 0.954600728 1.027535897 1.031620756 1.014760158 1.039558303 1.02923614 0.811245384 1 15.73802647 -8.228471097 24.97235038 0.90562263 1.017558747 0.368709939 0.060251646 563.5921599 426903.226 0.038654177 0.014607463 5.91E-09 8.228471097 0.111936117 S(ph)SIEDAQCPGLPDLIEENHVVNK ddPTM_A459_MK2206_30min_R1 2 SSIEDAQCPGLPDLIEENHVVNK 23 0 Q15398-1;Q15398;Q15398-3 Q15398-1 DLGAP5 Disks large-associated protein 5 1 S(0.5)S(0.5)IEDAQCPGLPDLIEENHVVNK;S(0.5)S(0.5)IEDAQCPGLPDLIEENHVVNK 187.54 2.70E-22 26182000 4077.1 4685.4 4079.2 3780 3945.9 4063.6 4100.9 3812.2 3756 3241.5 TRUE FALSE 3730.321235 4380.379608 3802.315269 4071.136255 3788.726447 4293.67752 3827.336444 3778.870337 4146.449641 3643.081492 1.02394669 1.202383097 1.043708541 1.117497993 1.039978506 1.17858399 1.050576676 1.037273074 1.138170982 1 11.83094355 -14.52287874 0.270158062 0.363140847 1.099627751 0.163133871 0.061049235 365.4639195 3.544406633 129.9066923 0.07019238 3.00E-15 14.52287874 0.736486903 S(ph)SIEDAQCPGLPDLIEENHVVNK ddPTM_A459_MK2206_30min_R2 1 SSIEDAQCPGLPDLIEENHVVNK 23 0 Q15398-1;Q15398;Q15398-3 Q15398-1 DLGAP5 Disks large-associated protein 5 1 S(0.5)S(0.5)IEDAQCPGLPDLIEENHVVNK 110.12 1.06E-05 2913600 18668 19992 20477 20533 20487 15369 22973 18481 15403 17873 TRUE FALSE 20097.23643 18999.22635 21159.69296 18855.38822 19682.57744 15953.87806 19956.6175 20896.53015 16742.7251 17289.80547 1.16237493 1.098868717 1.223824814 1.090549471 1.13839207 0.922733231 1.154241876 1.208604121 0.968358211 1 14.07763402 -1.522884832 0.018546839 0.196712215 2.239634377 0.207274732 0.086403127 6409.034131 9.20021725 384.2803817 664.4235808 0.02999958 1.522884832 2.042922162 S(ph)SISSISGR ddPTM_A459_MK2206_30min_R2 2 SSISSISGR 9 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 S(0.921)S(0.079)ISSISGR;S(0.498)S(0.498)IS(0.002)S(0.002)ISGR 128.35 0.0043454 38166000 220610 219414 206774 189812 177243 166672 190255 138604 140970 173915 TRUE FALSE 237500.0712 208518.2198 213667.742 174303.7524 170283.5492 173014.8198 165274.29 156720.0187 153231.3158 168240.1678 1.411672815 1.239408059 1.27001622 1.036041242 1.012145622 1.028379976 0.982371167 0.931525573 0.910789128 1 17.36016267 -5.329129957 0.665422562 0.948267671 1.509318077 0.911919676 0.046669923 0.479947176 0.258140138 0.023347745 0.184217333 4.69E-06 5.329129957 0.561050406 S(ph)SITEPEGPGGPNIQK ddPTM_A459_MK2206_30min_R1 1 SSITEPEGPGGPNIQK 16 0 Q96KQ4;A0A3B3ISJ2;H0YJL1 Q96KQ4 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 S(0.663)S(0.337)ITEPEGPGGPNIQK 328.73 1.67E-134 5352800 3319 3564 2852.5 2523.9 2828.7 2481.3 3360.6 2803 3600.1 4663.7 TRUE FALSE 3036.701621 3331.982952 2658.880248 2718.291215 2716.026889 2621.789062 3136.420506 2778.493667 3974.343278 5241.474365 0.579360197 0.635695745 0.507277163 0.518611945 0.518179943 0.500200684 0.598385166 0.530097731 0.758249111 1 12.35575697 -8.540196544 2.396246872 0.999503138 0.546953811 0.917239215 0.042803194 0.080234064 1.091974563 0.043427979 0.011846287 2.88E-09 8.540196544 -0.452549328 S(ph)SITEPEGPGGPNIQK ddPTM_A459_MK2206_30min_R2 1 SSITEPEGPGGPNIQK 16 0 Q96KQ4;A0A3B3ISJ2;H0YJL1 Q96KQ4 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 S(0.999)S(0.001)ITEPEGPGGPNIQK 288.06 1.70E-74 11449000 69239 68397 66571 72192 52178 51786 69299 49701 44648 69553 TRUE FALSE 74539.99108 65000.50444 68790.44391 66293.68267 50129.22955 53756.75252 60199.95806 56197.09135 48531.40233 67283.49131 1.107849632 0.966069138 1.022397063 0.985288982 0.745045011 0.798959024 0.894721081 0.835228527 0.721297326 1 16.03796495 -6.124264508 5.351078162 0.826296481 1.022146902 0.571969669 0.080023335 0.162837502 6.432744162 0.022995813 0.030065409 7.51E-07 6.124264508 0.195850421 S(ph)SITEPEGPNGPNIQK ddPTM_A459_MK2206_30min_R1 1 SSITEPEGPNGPNIQK 16 0 Q13625-2;Q13625;Q13625-3 Q13625-2 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 S(0.797)S(0.203)ITEPEGPNGPNIQK 258.39 5.70E-39 18269000 2450.4 2084.2 2451.5 1577.6 1815.6 1904 2091.5 2092.5 2326.7 2985.9 TRUE FALSE 2241.980612 1948.518201 2285.09901 1699.107025 1743.280807 2011.802835 1951.979851 2074.205493 2568.568791 3355.815834 0.668088096 0.580639194 0.680936953 0.506317125 0.519480476 0.59949739 0.581670731 0.618092767 0.76540815 1 11.71244783 -8.577224735 1.734086558 0.99943671 0.58749212 0.857003373 0.051820384 0.150660502 1.006083534 0.051171684 0.014611989 2.65E-09 8.577224735 -0.41194459 S(ph)SITEPEGPNGPNIQK ddPTM_A459_MK2206_30min_R2 4 SSITEPEGPNGPNIQK 16 0 Q13625-2;Q13625;Q13625-3 Q13625-2 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 S(0.497)S(0.497)IT(0.006)EPEGPNGPNIQK;S(0.946)S(0.054)ITEPEGPNGPNIQK;S(0.497)S(0.497)IT(0.007)EPEGPNGPNIQK;S(0.972)S(0.028)ITEPEGPNGPNIQK 305.23 1.38E-88 92900500 195764 155273 184919 173879 147233.4 125898.5 204635 147601.3 127762.7 203991 TRUE FALSE 210751.8424 147562.3686 191084.1072 159672.5295 141452.2769 130689.6556 177766.1787 166893.2967 138875.2687 197334.7904 1.067991315 0.747776752 0.968324474 0.809145357 0.716813678 0.66227377 0.90083547 0.845736813 0.703754611 1 17.5902858 -4.752600465 24.92198368 0.81147226 1.067991825 0.326471213 0.107792046 390.6576418 1101403.726 0.026512646 0.309554338 1.77E-05 4.752600465 0.256519565 S(ph)SKSFSLDEPPLFIPDNIATIR ddPTM_A459_MK2206_30min_R1 1 SSKSFSLDEPPLFIPDNIATIR 22 1 Q92576-2;Q92576;E7EVH3;D6R9X2;E9PE34;A0A1B0GX99 Q92576-2 PHF3 PHD finger protein 3 1 S(0.429)S(0.429)KS(0.111)FS(0.031)LDEPPLFIPDNIATIR 87.098 0.00030429 2151400 795.73 607.13 721.51 977.56 1111.3 923.4 698.88 781.65 413.23 220.06 TRUE FALSE 728.048985 567.6057266 672.5359114 1052.851841 1067.034568 975.68211 652.2589904 774.8161165 456.1867373 247.3226942 2.943720904 2.29500058 2.71926486 4.256996488 4.314341518 3.94497607 2.637279173 3.132814476 1.844500113 1 7.950250816 -8.393714945 1.473693292 0.988472576 3.359176637 0.582330461 0.652092667 0.317066474 1.447175412 0.708354397 0.212917645 4.04E-09 8.393714945 2.370704061 S(ph)SLAELMAR ddPTM_A459_MK2206_30min_R1 2 SSLAELMAR 9 0 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 S(0.903)S(0.097)LAELMAR;S(0.5)S(0.5)LAELMAR 153.1 0.0010364 10980400 3866.7 4673.6 5116.1 4136.8 4558.9 4404.7 4648.9 5017.8 3851.6 3904.9 TRUE FALSE 3537.81686 4369.347791 4768.833386 4455.417053 4377.309359 4654.090308 4338.780363 4973.929904 4251.987603 4388.668492 0.806125335 0.995597594 1.086624199 1.015209296 0.997411713 1.060478894 0.988632514 1.133357398 0.968855955 1 12.09956758 -4.777669615 3.732863629 1.034278956 0.781213446 0.665975908 0.047524123 0.141323403 3.444633327 0.01110955 0.099916005 1.67E-05 4.777669615 -0.25306551 S(ph)SLETLEDIEENAPLR ddPTM_A459_MK2206_30min_R1 2 SSLETLEDIEENAPLR 16 0 V9GYB4;Q8TDN4-2;Q8TDN4 V9GYB4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 S(0.978)S(0.022)LETLEDIEENAPLR;S(0.923)S(0.071)LET(0.006)LEDIEENAPLR 276.75 2.22E-62 4229630 793.95 704.57 809.97 730.36 585.82 591.93 1030.71 532.7 1016.58 1147.53 TRUE FALSE 726.4203833 658.7023649 754.9914931 786.6124537 562.4855489 625.4445651 961.9532165 528.0426601 1122.257129 1289.69468 0.563249887 0.510742872 0.585403278 0.609921454 0.436138536 0.484955529 0.745876704 0.409432301 0.870172721 1 10.33281385 -8.425344262 4.565186092 0.99631873 0.547960009 0.752161406 0.091205981 0.094129524 3.038690831 0.084493796 0.022072124 3.76E-09 8.425344262 -0.448358721 S(ph)SLETLEDIEENAPLRR ddPTM_A459_MK2206_30min_R1 2 SSLETLEDIEENAPLRR 17 1 V9GYB4;Q8TDN4-2;Q8TDN4 V9GYB4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 S(0.498)S(0.498)LET(0.004)LEDIEENAPLRR;S(0.497)S(0.497)LET(0.006)LEDIEENAPLRR 225.86 1.04E-13 10453000 527.72 404.34 582.13 522.44 364.42 425.86 561.58 603.95 378.01 545.04 TRUE FALSE 482.8346428 378.0173925 542.6166375 562.6784193 349.9043797 449.9718252 524.1180229 598.6697288 417.3054922 612.56367 0.788219521 0.617107104 0.885812633 0.918563158 0.571213078 0.734571518 0.855613952 0.977318372 0.681244273 1 9.258715996 -14.52287874 0.151366426 1.790328847 0.717288689 0.218356667 0.125088842 213.8757558 1.907377924 50.5757839 0.635908558 3.00E-15 14.52287874 -1.073040158 S(ph)SLETLEDIEENAPLRR ddPTM_A459_MK2206_30min_R2 2 SSLETLEDIEENAPLRR 17 1 V9GYB4;Q8TDN4-2;Q8TDN4 V9GYB4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 S(0.336)S(0.336)LET(0.327)LEDIEENAPLRR;S(0.432)S(0.432)LET(0.136)LEDIEENAPLRR 85.177 0.0060931 7450300 4280.4 2618.2 3140.54 4445.4 2934 3147.3 2562.88 2960.2 2696.78 3836.75 TRUE FALSE 4608.110715 2488.183995 3245.244036 4082.1966 2818.796418 3267.072707 2226.370777 3347.108304 2931.34105 3711.557162 1.241557253 0.670388165 0.874361863 1.0998609 0.759464638 0.880243134 0.599848172 0.90180702 0.789787392 1 11.85780887 -6.299684799 24.95402738 0.808767462 0.943089778 0.146023068 0.170153768 1138.924025 743111.8981 0.051202975 0.058059765 5.02E-07 6.299684799 0.134322316 S(ph)SLGSHQLPR ddPTM_A459_MK2206_30min_R1 3 SSLGSHQLPR 10 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.499)S(0.499)LGS(0.002)HQLPR;S(0.946)S(0.054)LGSHQLPR;S(0.5)S(0.5)LGS(0.001)HQLPR 110.8 0.0061104 22451700 13576.7 8804.7 10358.2 8052.7 13923.9 11784.5 13040.3 12075 8575.4 8457.5 TRUE FALSE 12421.93037 8231.51243 9655.114244 8672.920349 13369.28158 12451.72821 12170.40538 11969.42955 9466.843517 9505.278951 1.306845431 0.865993778 1.015763377 0.912431965 1.406511229 1.309980304 1.280383821 1.259240219 0.995956412 1 13.21451325 -6.248818857 24.95880911 1.230291021 1.013204345 0.224806225 0.163326559 988.0080724 1953920.697 0.047384205 0.060751563 5.64E-07 6.248818857 -0.217086676 S(ph)SLGSHQLPR ddPTM_A459_MK2206_30min_R2 2 SSLGSHQLPR 10 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.665)S(0.333)LGS(0.002)HQLPR;S(0.5)S(0.5)LGSHQLPR 116.24 0.004232 20885000 67067 66082.2 58641.3 74878.9 98662.8 84948.6 75712.9 50012 69936.6 64922.8 TRUE FALSE 72201.70109 62800.65404 60596.37167 68761.05434 94788.80273 88181.3785 65771.70528 56548.74012 76019.55905 62804.37435 1.149628538 0.999940763 0.964843171 1.094844986 1.509270711 1.404064277 1.047247201 0.900394928 1.210418221 1 15.93857743 -7.488884878 24.94571234 1.028008035 1.182832863 0.149584378 0.17194809 1314.08919 964320.5285 0.081601925 0.05497804 3.24E-08 7.488884878 0.154824827 S(ph)SLGSLQTPEAVTTR ddPTM_A459_MK2206_30min_R1 4 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.966)S(0.034)LGSLQTPEAVTTR;S(0.976)S(0.024)LGSLQTPEAVTTR;S(0.5)S(0.5)LGS(0.001)LQTPEAVTTR;S(0.997)S(0.003)LGSLQTPEAVTTR 233.48 3.21E-14 55977500 9618.1 7876.1 7348.5 6281.8 8257.4 7788.4 8836 8122.7 7008.1 7073.9 TRUE FALSE 8800.030088 7363.364458 6849.704294 6765.625324 7928.490273 8229.372477 8246.566562 8051.68409 7736.617074 7950.268137 1.106884691 0.926178128 0.861568965 0.850993351 0.997260738 1.03510628 1.037268985 1.012756293 0.973126559 1 12.9567878 -6.497154263 23.30207244 1.01428705 0.929554759 0.219483787 0.067166605 463.1319569 419520.1108 0.02194694 0.024767883 3.18E-07 6.497154263 -0.084732292 S(ph)SLGSLQTPEAVTTR ddPTM_A459_MK2206_30min_R2 1 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.592)S(0.408)LGSLQTPEAVTTR 133.23 0.00055555 18037000 72022 74516 70539 71066 60956 81955 84750 46938 61304 75874 TRUE FALSE 77536.0597 70815.6438 72890.73505 65259.68047 58562.56116 85073.85495 73622.2232 53072.95776 66636.11111 73398.23759 1.056374952 0.964813954 0.99308563 0.889117813 0.797874214 1.159072176 1.003051648 0.723082182 0.907870724 1 16.1634578 -7.687788256 24.99999998 0.861572935 0.976697858 0.152125772 0.109930425 67.48455639 22904.93939 0.052445708 0.030279527 2.05E-08 7.687788256 0.115124923 S(ph)SLPNGEGLQLK ddPTM_A459_MK2206_30min_R2 1 SSLPNGEGLQLK 12 0 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 S(0.963)S(0.037)LPNGEGLQLK 145.81 0.00067308 19045000 243410 144400 162050 167090 145900 95771 178740 139240 106260 170990 TRUE FALSE 262045.6568 137229.306 167452.6661 153438.2125 140171.2329 99415.63251 155271.2233 157439.1461 115502.3027 165410.6103 1.584213106 0.829628195 1.012345374 0.927620134 0.847413794 0.60102331 0.938701713 0.951808024 0.698276262 1 17.33569225 -4.75969828 24.99756382 0.865605049 1.584214003 0.747917741 0.124836853 22.56180328 323832.9614 0.031428724 0.196152701 1.74E-05 4.75969828 0.718608954 S(ph)SLQQENLVEQAGSSSLVNGR ddPTM_A459_MK2206_30min_R1 1 SSLQQENLVEQAGSSSLVNGR 21 0 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 S(0.787)S(0.213)LQQENLVEQAGSSSLVNGR 88.768 0.00085848 4226200 615.14 598.58 722.37 567.52 1294.9 1119.5 820.24 869.92 818.75 627.24 TRUE FALSE 562.8191128 559.6123332 673.337537 611.2304887 1243.321391 1182.885123 765.5232862 862.3143812 903.8619924 704.9472266 0.798384746 0.793835782 0.955160204 0.867058505 1.763708465 1.677976844 1.085929921 1.223232532 1.282169726 1 9.461371449 -6.159913548 10.75559272 1.354181627 0.855242055 0.525343049 0.225684919 0.44761431 45.08136329 0.070819101 0.091477061 6.92E-07 6.159913548 -0.498939572 S(ph)SLS(ph)GDEEDELFK ddPTM_A459_MK2206_30min_R1 1 SSLSGDEEDELFK 13 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 2 S(0.986)S(0.014)LS(1)GDEEDELFK 140.1 0.016369 1421600 920.55 773.96 971.9 723.27 594.16 427.85 631.75 691.16 784.29 455.79 TRUE FALSE 842.2523885 723.5750633 905.9301359 778.9763807 570.493349 452.0744973 589.6071102 685.117261 865.8197521 512.2567062 1.644199828 1.412524335 1.768508103 1.520675808 1.113686443 0.882515527 1.1509993 1.337449081 1.690206769 1 9.000723156 -6.169524116 5.103477986 1.195523178 1.59530201 0.436441646 0.218490597 0.238151466 10.08375695 0.069668032 0.090696306 6.77E-07 6.169524116 0.399778832 S(ph)SLSASHPMVGK ddPTM_A459_MK2206_30min_R1 1 SSLSASHPMVGK 12 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.689)S(0.309)LS(0.001)ASHPMVGK 140.31 0.00071814 45201000 12043 7749.4 9045.9 7881.8 13139 11907 11863 10272 7281.4 6436.9 TRUE FALSE 11018.67961 7244.912651 8431.889511 8488.857602 12615.64581 12581.16405 11071.64092 10182.19299 8038.327587 7234.351768 1.523105312 1.001459824 1.165534906 1.173409571 1.743852969 1.739086577 1.530426121 1.40747828 1.111133083 1 12.82064803 -3.707805866 15.25247068 1.359658561 10.43263295 0 0.272310906 0 0 0.066568986 0 0.000195972 3.707805866 9.072974385 S(ph)SLSASHPMVGK ddPTM_A459_MK2206_30min_R2 1 SSLSASHPMVGK 12 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.462)S(0.462)LS(0.071)AS(0.004)HPMVGK 98.902 0.0098286 21668000 67540 110760 99104 144170 129590 157930 115550 76139 118020 91734 TRUE FALSE 72710.91433 105259.8195 102408.0779 132390.8498 124501.6455 163940.1368 100378.1462 86090.62872 128285.1663 88740.72709 0.819363518 1.186150068 1.154014411 1.491883763 1.40298203 1.847405833 1.131139551 0.970136616 1.445617705 1 16.43730875 -4.594417836 1.356715993 1.333379686 0.423481079 0.258931688 0.248083684 2.822341484 3.385561388 0.075310984 3.987188151 2.54E-05 4.594417836 -0.909898607 S(ph)SLSGDEEDELFK ddPTM_A459_MK2206_30min_R1 3 SSLSGDEEDELFK 13 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 S(0.902)S(0.088)LS(0.01)GDEEDELFK;S(0.948)S(0.052)LSGDEEDELFK;S(0.855)S(0.132)LS(0.012)GDEEDELFK 307.15 1.26E-87 124836300 7039.45 8077.7 7576.6 7084.88 5308.32 5357.63 6063 5929.9 6108.3 5674.08 TRUE FALSE 6440.707812 7551.840262 7062.321502 7630.558685 5096.878374 5660.974381 5658.548333 5878.055509 6743.279644 6377.027868 1.009985834 1.184225696 1.107462857 1.196569757 0.799256092 0.887713602 0.887333167 0.921754716 1.05743299 1 12.63866847 -6.253057536 24.99976069 0.917863658 1.127601503 0.595220152 0.080219674 421.4000955 1256870.946 0.023775381 0.030179195 5.58E-07 6.253057536 0.209737845 S(ph)SLVDEHPEDAEFEQK ddPTM_A459_MK2206_30min_R2 2 SSLVDEHPEDAEFEQK 16 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 S(0.843)S(0.157)LVDEHPEDAEFEQK;S(0.5)S(0.5)LVDEHPEDAEFEQK 89.557 0.012448 2587200 10301 12067.1 13528.3 14450.5 13361.5 10268 14816.8 12589 11851.1 16337.6 TRUE FALSE 11089.65248 11467.86536 13979.32677 13269.84793 12836.86037 10658.75594 12871.33636 14234.42552 12881.88726 15804.50545 0.701676653 0.725607353 0.884515293 0.83962437 0.812227906 0.674412494 0.814409309 0.900656181 0.815076897 1 13.94804827 -14.52287874 0.141474526 1.718685954 0.726472884 0.501652111 0.066062213 129.452584 1.113039651 26.02037598 0.429109146 3.00E-15 14.52287874 -0.99221307 S(ph)SLYEGLEKPESR ddPTM_A459_MK2206_30min_R2 1 SSLYEGLEKPESR 13 1 P20020-6;P20020;P20020-4;P20020-1;A0A0U1RQU3;E7ERY9;H0YHH6;A0A2R8Y4R4;Q01814-6;Q01814-8;Q01814-5;Q01814 P20020-6;Q01814-6 ATP2B1;ATP2B2 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 1 S(0.5)S(0.5)LYEGLEKPESR 71.316 0.032026 2277400 17049 14462 11485 10389 10403 12923 16772 10416 16167 12099 TRUE FALSE 18354.28455 13743.83811 11867.90417 9540.185467 9994.525949 13414.79382 14569.81625 11777.40696 17573.17644 11704.21062 1.56817791 1.174264421 1.013985868 0.815107125 0.853925675 1.146151095 1.244835446 1.006253847 1.50144055 1 13.51474002 -6.9889267 24.95547709 1.189630752 1.063990872 0.038082133 0.23340858 731.5457001 1648649.376 0.086202701 0.07595786 1.03E-07 6.9889267 -0.125639881 S(ph)SLYFPR ddPTM_A459_MK2206_30min_R2 1 SSLYFPR 7 0 B8ZZW8;E7ENZ2;E9PG19;O94868-2;O94868 B8ZZW8 FCHSD2 F-BAR and double SH3 domains protein 2 1 S(0.645)S(0.345)LY(0.01)FPR 85.161 0.036582 2076200 12537 12641 9994.4 13705 14257 13045 14711 8459.2 9604.3 11264 TRUE FALSE 13496.84236 12013.26632 10327.60831 12585.25766 13697.19854 13541.43662 12779.42803 9564.846485 10439.66465 10896.4566 1.23864508 1.102492926 0.947795112 1.15498626 1.257032359 1.242737627 1.172805848 0.877794207 0.958078854 1 13.41157144 -7.754337929 24.97099894 0.938452387 1.155943483 0.549181232 0.088832682 129.0089572 453641.6454 0.047651447 0.026762135 1.76E-08 7.754337929 0.217491096 S(ph)SLYGIAK ddPTM_A459_MK2206_30min_R2 3 SSLYGIAK 8 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.909)S(0.091)LYGIAK;S(0.924)S(0.076)LYGIAK;S(0.752)S(0.248)LYGIAK 120.31 0.0043259 26760000 363499 417252 386923 400513 349773 332043 394465 276874 363111 353903 TRUE FALSE 391328.7629 396531.8724 399822.8197 367789.8067 336039.1546 344679.129 342671.2717 313062.3825 394693.7384 342355.1741 1.143049069 1.158247056 1.167859726 1.074293116 0.981551266 1.00678814 1.000923303 0.914437421 1.152877971 1 18.38513429 -5.97058863 3.281833093 1.005065075 1.156301037 0.579549974 0.055884046 0.161824968 3.628543876 0.015954858 0.023912737 1.07E-06 5.97058863 0.151235962 S(ph)SMEMEGIFNHK ddPTM_A459_MK2206_30min_R1 4 SSMEMEGIFNHK 12 0 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2 E7EPJ7 TRIO Triple functional domain protein 1 S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.665)S(0.335)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK 190.57 9.07E-05 29437900 9007 9453.3 9513.5 8878.8 9187.1 8592.3 9935.9 8649.6 8391 8313.3 TRUE FALSE 8240.907352 8837.888452 8867.750126 9562.646714 8821.158353 9078.788601 9273.09424 8573.977459 9263.274477 9343.214366 0.88202058 0.945915196 0.949111278 1.023485745 0.944124581 0.97169863 0.992495075 0.917668922 0.99144407 1 13.18970325 -4.671463675 1.607283496 0.972485887 0.830904262 0.484144169 0.028927304 1.192833574 2.422760198 0.007802932 0.288365623 2.13E-05 4.671463675 -0.141581625 S(ph)SMEMEGIFNHK ddPTM_A459_MK2206_30min_R2 8 SSMEMEGIFNHK 12 0 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2 E7EPJ7 TRIO Triple functional domain protein 1 S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.731)S(0.269)MEMEGIFNHK;S(0.675)S(0.325)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK 182.72 6.90E-05 42514300 193418 215830 200540 231184 239832 219646 260675 188078 193788 226879 TRUE FALSE 208226.2308 205112.196 207225.9035 212295.5277 230414.9906 228004.7824 226448.0594 212660.4404 210643.33 219475.9568 0.948742786 0.934554286 0.944184987 0.967283755 1.049841604 1.038859954 1.031767045 0.96894641 0.959755834 1 17.74370338 -6.034445807 5.647855793 1.009531186 0.943500918 0.549719615 0.027048293 0.159382521 14.40576065 0.009041866 0.012201283 9.24E-07 6.034445807 -0.066030268 S(ph)SPAAFINPPIGTVTPALK ddPTM_A459_MK2206_30min_R1 2 SSPAAFINPPIGTVTPALK 19 0 F6VRR5;Q9BY77-2;Q9BY77;Q6R954;F8WEE2;Q8WUT1;F8WCX5 F6VRR5 POLDIP3;PDIP46 Polymerase delta-interacting protein 3 1 S(0.5)S(0.5)PAAFINPPIGTVTPALK;S(0.5)S(0.5)PAAFINPPIGTVTPALK 209.23 1.80E-16 16936400 4255.8 4615 4421.9 3648.1 4394.2 4100.7 3983.9 3925.1 4965.4 3705.6 TRUE FALSE 3893.821862 4314.562661 4121.753748 3929.077294 4219.169709 4332.87809 3718.1413 3890.783265 5481.571099 4164.677704 0.934963553 1.035989569 0.989693331 0.943428897 1.013084327 1.040387372 0.892780082 0.934233941 1.316205356 1 12.02398914 -8.235017405 24.90006129 1.158102783 0.975634885 0.436327448 0.084082668 533.3143405 502596.8039 0.053086764 0.020053072 5.82E-09 8.235017405 -0.182467898 S(ph)SPAAFINPPIGTVTPALK ddPTM_A459_MK2206_30min_R2 2 SSPAAFINPPIGTVTPALK 19 0 F6VRR5;Q9BY77-2;Q9BY77;Q6R954;F8WEE2;Q8WUT1;F8WCX5 F6VRR5 POLDIP3;PDIP46 Polymerase delta-interacting protein 3 1 S(0.5)S(0.5)PAAFINPPIGTVTPALK;S(0.5)S(0.5)PAAFINPPIGTVTPALK 210.57 1.44E-16 17773600 32884 32917 37219 44883 35201 33671 43503 33444 27298.3 40860 TRUE FALSE 35401.62432 31282.38965 38459.86288 41215.91533 33818.83187 34952.3735 37791.00384 37815.24563 29672.65679 39526.74155 0.895637306 0.791423437 0.973008687 1.042734962 0.855593721 0.884271562 0.956087002 0.956700303 0.750698277 1 15.27054141 S(ph)SPAELSSSSQHLLR ddPTM_A459_MK2206_30min_R2 2 SSPAELSSSSQHLLR 15 0 Q9UQC2;Q9UQC2-2;E9PJE2 Q9UQC2 GAB2 GRB2-associated-binding protein 2 1 S(0.5)S(0.5)PAELSSSSQHLLR;S(0.5)S(0.5)PAELSSSSQHLLR 221.34 1.16E-09 10584400 18022.8 48654 31566 71786 66041 74683 52895 40996 62625 31158 TRUE FALSE 19402.63943 46237.91311 32618.39469 65920.85417 63447.89851 77525.1139 45949.82296 46354.31796 68072.0093 30141.31701 0.64372235 1.534037583 1.082182131 2.187059515 2.10501414 2.572054627 1.524479602 1.537899553 2.258428498 1 14.87945484 -5.752072546 24.87166473 1.928927325 1.131386092 0.37363048 0.469209422 196.0271052 520503.3399 0.125619844 0.213846719 1.77E-06 5.752072546 -0.797541233 S(ph)SPAFGDRR ddPTM_A459_MK2206_30min_R1 2 SSPAFGDRR 9 1 P13716;P13716-2 P13716 ALAD Delta-aminolevulinic acid dehydratase 1 S(0.5)S(0.5)PAFGDRR;S(0.5)S(0.5)PAFGDRR 113.93 0.0045341 9281000 1490.52 1597.57 1632.17 1344.35 1539.03 1346.05 1578.33 1363 1299.42 1322.98 TRUE FALSE 1363.743447 1493.567903 1521.382848 1447.89207 1477.727176 1422.262188 1473.042486 1351.083435 1434.499359 1486.88075 0.917184143 1.004497437 1.023204347 0.973778206 0.993843774 0.956540857 0.99069309 0.908669666 0.964770953 1 10.53807323 S(ph)SPAFGDRR ddPTM_A459_MK2206_30min_R2 2 SSPAFGDRR 9 1 P13716;P13716-2 P13716 ALAD Delta-aminolevulinic acid dehydratase 1 S(0.5)S(0.5)PAFGDRR;S(0.5)S(0.5)PAFGDRR 97.597 0.010498 9001100 13285.5 20356.3 14649.9 17490 18280.4 14934.7 19477.6 21843.6 15145.2 18035.9 TRUE FALSE 14302.64809 19345.43574 15138.32035 16061.01105 17562.61964 15503.05047 16920.16772 24698.63352 16462.50212 17447.39006 0.819758603 1.108786797 0.867655294 0.920539462 1.006604402 0.88855986 0.969782166 1.415606199 0.943550987 1 14.09072362 -7.554728545 24.99994709 1.146286134 0.94156822 0.257932853 0.138122781 222.5703718 174700.2984 0.059710319 0.034474108 2.79E-08 7.554728545 -0.204717914 S(ph)SPAPHSGPCPSR ddPTM_A459_MK2206_30min_R1 2 SSPAPHSGPCPSR 13 0 P85299;P85299-5;P85299-2;P85299-4;P85299-3 P85299 PRR5 Proline-rich protein 5 1 S(0.605)S(0.395)PAPHSGPCPSR;S(0.986)S(0.014)PAPHSGPCPSR 172.33 0.00017837 4913600 992.1 1046.9 1138.66 1207 1755.49 1439.62 1673.81 1553.25 1383.9 1124.42 TRUE FALSE 907.7166853 978.7466197 1061.370932 1299.963349 1685.565116 1521.13004 1562.153189 1539.670099 1527.761357 1263.721639 0.718288472 0.774495419 0.839877153 1.028678555 1.333810441 1.203690745 1.236152916 1.218361744 1.208938196 1 10.303463 -5.854406319 2.390176792 1.212902647 0.75838042 0.841355537 0.082120037 0.097104736 1.12886709 0.023457029 0.040216599 1.40E-06 5.854406319 -0.454522227 S(ph)SPAPHSGPCPSR ddPTM_A459_MK2206_30min_R2 2 SSPAPHSGPCPSR 13 0 P85299;P85299-5;P85299-2;P85299-4;P85299-3 P85299 PRR5 Proline-rich protein 5 1 S(0.983)S(0.017)PAPHSGPCPSR;S(0.5)S(0.5)PAPHSGPCPSR 145.83 0.00061654 16456400 17215.2 28366.7 22267.6 33632.1 34317.2 33208.6 35436.1 28738.6 36498.8 32096.9 TRUE FALSE 18533.20895 26958.05093 23009.99067 30884.24985 32969.7343 34472.37654 30783.2975 32494.83369 39673.39965 31049.58078 0.596890795 0.868225923 0.741072507 0.99467526 1.061841528 1.110236457 0.991423933 1.046546616 1.277743488 1 14.92228617 -5.399682721 0.729449933 1.100744132 0.565989706 0.724074641 0.09579779 0.775074807 0.545757272 0.043974698 0.298293422 3.98E-06 5.399682721 -0.534754426 S(ph)SPATSLFVELDEEEVK ddPTM_A459_MK2206_30min_R1 2 SSPATSLFVELDEEEVK 17 0 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 S(0.99)S(0.01)PATSLFVELDEEEVK;S(0.5)S(0.5)PATSLFVELDEEEVK 310.17 4.27E-103 9521200 1987.85 1771.07 1367.09 1395.02 1364.15 1331.53 1947.23 1359.85 3002.9 2935 TRUE FALSE 1818.772919 1655.773021 1274.29574 1502.464682 1309.813017 1406.920078 1817.33384 1347.960975 3315.062201 3298.609958 0.551375562 0.501960839 0.386312949 0.455484189 0.397080295 0.426519078 0.550939293 0.408645154 1.004987629 1 11.68764248 -8.264468321 24.99573008 1.002493913 0.458441618 0.937203863 0.056190882 59.63271152 492093.6577 0.047977556 0.014455708 5.44E-09 8.264468321 -0.544052295 S(ph)SPATSLFVELDEEEVK ddPTM_A459_MK2206_30min_R2 2 SSPATSLFVELDEEEVK 17 0 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 S(0.863)S(0.136)PAT(0.001)SLFVELDEEEVK;S(0.5)S(0.5)PAT(0.001)SLFVELDEEEVK 219.53 7.08E-12 30758000 253900 128965 158858 121820 97101 94489 213091 105840 132272 172906 TRUE FALSE 273338.7792 122560.7856 164154.2464 111866.9163 93288.32685 98084.84511 185111.8957 119673.6514 143776.7795 167264.0914 1.634174896 0.732738178 0.981407576 0.668804137 0.557730748 0.586407066 1.106704339 0.715477246 0.859579473 1 17.35176823 -4.759128798 24.98867019 0.788846129 1.634176 0.671470661 0.174653965 36.67536874 396550.4111 0.044029528 0.286278326 1.74E-05 4.759128798 0.845329871 S(ph)SPCMVR ddPTM_A459_MK2206_30min_R2 1 SSPCMVR 7 0 Q13191;A0A2R8Y8D8;A0A2R8Y5E1;A0A2R8YFD4;Q13191-3;Q13191-2 Q13191 CBLB E3 ubiquitin-protein ligase CBL-B 1 S(0.78)S(0.22)PCMVR 98.629 0.021733 4494900 24927 27220 20236 27925 18861 18944 21626 22305 20097 26728 TRUE FALSE 26835.43029 25868.29438 20910.65814 25643.43817 18120.42237 19664.92719 18786.48022 25220.34008 21845.00073 25855.86755 1.03788551 1.000480619 0.808739374 0.991784094 0.700824381 0.760559558 0.726584795 0.975420377 0.844875953 1 14.65820409 -5.080420627 1.521815167 0.837050632 1.076054127 0.275217083 0.104766844 0.826316878 2.665635457 0.030892027 0.251324043 8.31E-06 5.080420627 0.239003495 S(ph)SPELEDTATSSK ddPTM_A459_MK2206_30min_R1 2 SSPELEDTATSSK 13 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.903)S(0.097)PELEDTATSSK;S(0.908)S(0.092)PELEDTATSSK 128.88 0.0017817 8531200 2942.6 2700.2 2333.8 1485.55 1848.87 2373.2 2140.5 1979.49 2626 2619.3 TRUE FALSE 2692.316418 2524.416489 2175.388158 1599.967318 1775.225593 2507.568533 1997.711151 1962.183528 2898.982097 2943.798659 0.914572201 0.857537074 0.738973147 0.54350433 0.603039066 0.851813872 0.678616775 0.666548142 0.984775942 1 11.52346329 -8.271180532 23.80225541 0.992388123 0.727909937 0.468635556 0.110918761 374.3632886 914727.2541 0.110785717 0.03018197 5.36E-09 8.271180532 -0.264478186 S(ph)SPELLPSGVTDENEVTTAVTEK ddPTM_A459_MK2206_30min_R1 3 SSPELLPSGVTDENEVTTAVTEK 23 0 B1AUU8;P42566;P42566-2 B1AUU8 EPS15 Epidermal growth factor receptor substrate 15 1 S(0.5)S(0.5)PELLPS(0.001)GVTDENEVTTAVTEK;S(0.5)S(0.5)PELLPSGVTDENEVTTAVTEK;S(0.5)S(0.5)PELLPS(0.001)GVTDENEVTTAVTEK 256.23 1.16E-46 32634400 17605.5 18062.7 17713.2 14286.3 15950.9 15000.6 17677.2 16821.8 17890.8 16573.2 TRUE FALSE 16108.05977 16886.81495 16510.87734 15386.6333 15315.54188 15849.92101 16497.98624 16674.72878 19750.61268 18626.41314 0.864796655 0.906605841 0.886422803 0.826065286 0.822248587 0.850937907 0.885730716 0.895219528 1.060355128 1 14.18506226 -8.15164472 4.031312085 1.029525032 0.863816959 0.838547618 0.02878662 0.092607272 2.507663787 0.024274028 0.008251401 7.05E-09 8.15164472 -0.165708073 S(ph)SPELTR ddPTM_A459_MK2206_30min_R1 1 SSPELTR 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.689)S(0.311)PELTR 141.52 0.0031618 70813000 2107.1 1996 2456.1 1572.2 2141.2 1971.1 2545.8 2152.3 1779.1 2385 TRUE FALSE 1927.88008 1866.060037 2289.386775 1693.291116 2055.91147 2082.701979 2375.974327 2133.482668 1964.043812 2680.471806 0.71923162 0.6961685 0.854098435 0.631713832 0.766996118 0.776990817 0.886401536 0.7959355 0.732723175 1 11.38827125 -6.907924555 2.648108174 0.836465689 0.731283202 0.306691555 0.083358867 0.396616139 5.639626107 0.031906753 0.027112759 1.24E-07 6.907924555 -0.105182487 S(ph)SPELTR ddPTM_A459_MK2206_30min_R2 3 SSPELTR 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.689)S(0.311)PELTR;S(0.571)S(0.192)PELT(0.238)R;S(0.5)S(0.5)PELTR 141.52 0.0031618 380220000 114040 121776 122393 123421 140949 121927 140207 131278 121412 137025 TRUE FALSE 122770.9901 115728.7809 126473.5215 113337.1095 135414.634 126567.0174 121797.6525 148436.4853 131972.1963 132553.8855 0.926196842 0.873069699 0.954129116 0.855026687 1.021581778 0.954834458 0.918853884 1.11981995 0.995611678 1 17.01621943 -6.910915967 0.780812592 1.031840499 0.902574543 0.378402909 0.057742631 0.653874936 0.849839098 0.041284738 0.034367406 1.23E-07 6.910915967 -0.129265956 S(ph)SPELTRK ddPTM_A459_MK2206_30min_R1 1 SSPELTRK 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.928)S(0.072)PELTRK 113.71 0.019093 5826300 3979.6 4058.9 3473.5 4967.1 3535.5 2919.3 4554.8 5841.2 1216.9 1820.7 TRUE FALSE 3641.114122 3794.664872 3237.728498 5349.666903 3394.673548 3084.588243 4250.957603 5790.131004 1343.40111 2046.262062 1.779397757 1.854437388 1.582264832 2.614360596 1.658963244 1.507425809 2.077425801 2.829613622 0.656514693 1 10.99877521 -8.285934854 24.96080146 0.828256884 1.966884865 0.553028455 0.416699352 668.0394228 680722.8083 0.402985905 0.104250151 5.18E-09 8.285934854 1.138627981 S(ph)SPEQPIGQGR ddPTM_A459_MK2206_30min_R1 2 SSPEQPIGQGR 11 0 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 S(0.983)S(0.017)PEQPIGQGR;S(0.983)S(0.017)PEQPIGQGR 145.14 0.00070712 15200500 3818.9 3519.6 3753.9 3538.3 3872.1 3104.5 3465.4 3827.8 2975 2954.8 TRUE FALSE 3494.082501 3290.4734 3499.095727 3810.820479 3717.866058 3280.274107 3234.229489 3794.333948 3284.261896 3320.862932 1.052161011 0.990848905 1.053670627 1.147539226 1.119548182 0.987777627 0.97391237 1.142574694 0.988978456 1 11.69734246 -6.770020557 24.99720098 1.024763541 1.071297925 0.16898889 0.059175073 445.1815103 1296818.883 0.022265956 0.019949691 1.70E-07 6.770020557 0.046534384 S(ph)SPEQPIGQGR ddPTM_A459_MK2206_30min_R2 2 SSPEQPIGQGR 11 0 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 S(0.988)S(0.012)PEQPIGQGR;S(0.844)S(0.156)PEQPIGQGR 150.09 0.00061963 57165000 82164 90863 78418 94141 98366 107639 113230 79036 85267 102596 TRUE FALSE 88454.53901 86350.87555 81032.41698 86449.37916 94503.65659 111735.2776 98362.76499 89366.27657 92683.36953 99248.30092 0.89124487 0.870048905 0.816461503 0.871041402 0.952194201 1.125815521 0.991077571 0.900431299 0.933853463 1 16.59875478 -6.316007646 4.043171652 0.988574587 0.858583744 0.522551271 0.057623877 0.200717059 6.830783844 0.020160256 0.02363268 4.83E-07 6.316007646 -0.129990843 S(ph)SPEQPRPSTSK ddPTM_A459_MK2206_30min_R1 2 SSPEQPRPSTSK 12 1 P29590-2;P29590;P29590-9;P29590-8;P29590-5;P29590-3;P29590-4;P29590-12;P29590-13;P29590-11;H3BVD2;H3BT57;H3BUJ5;H3BRN3 P29590-2 PML Protein PML 1 S(0.92)S(0.08)PEQPRPSTSK;S(0.99)S(0.01)PEQPRPSTSK 234.87 5.97E-10 122501000 7319.4 7595.7 7365.9 6394.8 6510.6 6389.3 7020.7 6254 5381.5 5681.5 TRUE FALSE 6696.846594 7101.218549 6865.923231 6887.328604 6251.269016 6751.056644 6552.361913 6199.321937 5940.926183 6385.367113 1.048780199 1.11210811 1.075258965 1.078611219 0.978999156 1.057269931 1.026152733 0.970863825 0.930396965 1 12.64055385 -6.87883648 0.65912458 0.964718362 1.086749667 0.590022778 0.034562136 0.534078498 0.500028712 0.028221347 0.026627241 1.32E-07 6.87883648 0.122031305 S(ph)SPEQPRPSTSK ddPTM_A459_MK2206_30min_R2 1 SSPEQPRPSTSK 12 1 P29590-2;P29590;P29590-9;P29590-8;P29590-5;P29590-3;P29590-4;P29590-12;P29590-13;P29590-11;H3BVD2;H3BT57;H3BUJ5;H3BRN3 P29590-2 PML Protein PML 1 S(0.911)S(0.089)PEQPRPSTSK 171.99 0.0011535 37074000 27425 34795 28980 34839 32281 27367 33171 29386 30043 26045 TRUE FALSE 29524.67909 33067.1309 29946.17874 31992.54226 31013.48574 28408.47036 28815.60785 33226.8511 32656.08583 25195.15378 1.171839606 1.31244013 1.188569 1.269789521 1.230930599 1.127537089 1.143696447 1.318779452 1.29612568 1 14.62085864 -6.549105517 24.78762141 1.193297747 1.239352796 0.076356694 0.091582308 692.7839064 654763.3351 0.030210989 0.030211947 2.82E-07 6.549105517 0.046055049 S(ph)SPGAGPSDHHSASR ddPTM_A459_MK2206_30min_R1 4 SSPGAGPSDHHSASR 15 0 I3VM54;Q9Y2K7-3;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2 I3VM54 KDM2A Lysine-specific demethylase 2A 1 S(0.78)S(0.22)PGAGPSDHHSASR;S(0.5)S(0.5)PGAGPSDHHSASR;S(0.5)S(0.5)PGAGPSDHHSASR;S(0.5)S(0.5)PGAGPSDHHSASR 183.88 1.39E-05 4356690 1599.87 1111.73 1486.79 826.31 1965.94 1833.3 2144.73 1558.64 453.04 569.52 TRUE FALSE 1463.792655 1039.356175 1385.870837 889.9525394 1887.632447 1937.099862 2001.658975 1545.012975 500.1351292 640.0764373 2.286902892 1.623800088 2.165164591 1.390384785 2.949073481 3.026357086 3.127218655 2.413794486 0.781367818 1 9.32210039 -6.254671142 24.78360664 2.373040239 1.870551613 0.022666596 0.793683554 1362.368242 4988649.412 0.240670568 0.30357183 5.56E-07 6.254671142 -0.502488626 S(ph)SPGAGPSDHHSASR ddPTM_A459_MK2206_30min_R2 4 SSPGAGPSDHHSASR 15 0 I3VM54;Q9Y2K7-3;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2 I3VM54 KDM2A Lysine-specific demethylase 2A 1 S(0.5)S(0.5)PGAGPSDHHSASR;S(0.814)S(0.186)PGAGPSDHHSASR;S(0.5)S(0.5)PGAGPSDHHSASR;S(0.5)S(0.5)PGAGPSDHHSASR 147.6 0.00021225 17276100 779.63 7866.56 3725.65 15274.59 14591 30348.19 11369.07 7431.06 13642.7 2542.3 TRUE FALSE 839.3190722 7475.918069 3849.861312 14026.60714 14018.08403 31503.11164 9876.297452 8402.325057 14829.31739 2459.344959 0.341277489 3.039800513 1.565401103 5.7033915 5.699925898 12.80955383 4.015824383 3.416489023 6.02978339 1 11.26405839 -5.769793453 10.2931707 5.875267482 1.786173486 0.264602181 2.918004862 0.238841518 259.5756918 0.832942217 1.295967324 1.70E-06 5.769793453 -4.089093996 S(ph)SPGAVAGLSNAPGTPR ddPTM_A459_MK2206_30min_R1 2 SSPGAVAGLSNAPGTPR 17 0 Q9BWG4-2;Q9BWG4;V9GYB2;U3KPY3 Q9BWG4-2;U3KPY3 SSBP4 Single-stranded DNA-binding protein 4 1 S(0.867)S(0.133)PGAVAGLSNAPGTPR;S(0.5)S(0.5)PGAVAGLSNAPGTPR 245.18 2.54E-23 44877000 3227.4 3129.3 3147.4 2672.4 3078.76 2857.76 3300.8 2617.7 2752.4 2494.79 TRUE FALSE 2952.892682 2925.582001 2933.763257 2878.228711 2956.12647 3019.563902 3080.609655 2594.813725 3038.52183 2803.86342 1.053151399 1.043411024 1.046328875 1.026522437 1.054304731 1.076929739 1.098701753 0.925442269 1.083691099 1 11.45320036 -7.733368415 24.99999145 1.003424743 1.055597931 0.277133686 0.039920137 266.0720801 236963.7976 0.017853227 0.010305187 1.85E-08 7.733368415 0.052173189 S(ph)SPGAVAGLSNAPGTPR ddPTM_A459_MK2206_30min_R2 1 SSPGAVAGLSNAPGTPR 17 0 Q9BWG4-2;Q9BWG4;V9GYB2;U3KPY3 Q9BWG4-2;U3KPY3 SSBP4 Single-stranded DNA-binding protein 4 1 S(0.5)S(0.5)PGAVAGLSNAPGTPR 108.96 0.0022863 14383000 14905 15265 12856 15473 16743 14039 15845 9999.5 16930 16781 TRUE FALSE 16046.13826 14506.9623 13284.61262 14208.8064 16085.58569 14573.26398 13764.53247 11306.46898 18402.5408 16233.43734 0.988462143 0.893646982 0.818348717 0.875280207 0.990892154 0.897731249 0.847912378 0.6964926 1.13361948 1 13.98668089 -8.286090849 24.99816217 1.066809763 0.878337015 0.447035804 0.08481441 840.9762583 852794.9475 0.082673053 0.021386648 5.17E-09 8.286090849 -0.188472749 S(ph)SPGGQDEGGFMAQGK ddPTM_A459_MK2206_30min_R1 4 SSPGGQDEGGFMAQGK 16 0 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30 A0A1B0GTU4 PXN Paxillin 1 S(0.5)S(0.5)PGGQDEGGFMAQGK;S(0.869)S(0.131)PGGQDEGGFMAQGK;S(0.843)S(0.157)PGGQDEGGFMAQGK;S(0.911)S(0.089)PGGQDEGGFMAQGK 338.36 2.00E-153 153028900 11598.46 11894.82 11818.95 10738.55 10960.05 10388.73 12667.18 11161.88 11315.91 10029.22 TRUE FALSE 10611.95007 11120.46506 11016.7126 11565.63498 10523.488 10976.93091 11822.17553 11064.29286 12492.23934 11271.71549 0.941467169 0.986581418 0.977376746 1.026075844 0.933619023 0.973847408 1.048835516 0.981597954 1.108281996 1 13.46041948 -7.252068538 24.21501939 1.033145362 0.974570716 0.373090832 0.039020205 481.7521119 1244890.677 0.014401394 0.010981753 5.60E-08 7.252068538 -0.058574646 S(ph)SPGGQDEGGFMAQGK ddPTM_A459_MK2206_30min_R2 5 SSPGGQDEGGFMAQGK 16 0 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30 A0A1B0GTU4 PXN Paxillin 1 S(0.5)S(0.5)PGGQDEGGFMAQGK;S(0.762)S(0.238)PGGQDEGGFMAQGK;S(0.5)S(0.5)PGGQDEGGFMAQGK;S(0.946)S(0.054)PGGQDEGGFMAQGK;S(0.836)S(0.164)PGGQDEGGFMAQGK 226.67 4.61E-15 151396400 289331 311966 291952 313428 320587 278313 327601 265727 250037 321109 TRUE FALSE 311482.4038 296474.2221 301685.534 287819.9298 307999.1436 288904.3962 284586.5952 300458.4313 271784.7663 310631.2396 1.002740111 0.954425004 0.971201526 0.926564663 0.991526621 0.930055833 0.916155746 0.967251174 0.874943443 1 18.2448434 -6.789070398 24.98370498 0.934289079 0.966198063 0.15559904 0.036033835 393.6564553 355937.5175 0.011888729 0.010486942 1.63E-07 6.789070398 0.031908984 S(ph)SPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSR ddPTM_A459_MK2206_30min_R1 1 SSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSR 34 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 S(0.452)S(0.452)PGLY(0.004)T(0.043)S(0.049)PGQDS(0.001)LQPTAVSPPYGGDISPVSPSR 100.72 1.65E-11 5488500 192.11 194.66 232.11 112.8 264.19 183.88 321.58 238.13 359.34 338.75 TRUE FALSE 175.7700357 181.9875986 216.3550199 121.4878755 253.6667529 194.2911267 300.127985 236.0480545 396.6946789 380.7169074 0.461681717 0.478012915 0.568283193 0.319102917 0.66628707 0.510329652 0.788323237 0.620009382 1.041967591 1 8.57257483 -7.829685545 0.740511934 1.029355318 0.473142617 0.747133117 0.112098774 0.308894541 0.329324021 0.097068674 0.044872494 1.48E-08 7.829685545 -0.556212701 down S(ph)SPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSR ddPTM_A459_MK2206_30min_R2 1 SSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSR 34 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 S(0.496)S(0.496)PGLY(0.004)T(0.002)S(0.002)PGQDSLQPTAVSPPYGGDISPVSPSR 98.762 2.51E-11 3824000 8288.3 9701.7 7800.5 9691.6 6835.1 7385 8615.7 4356.1 8658.5 8470.7 TRUE FALSE 8922.858621 9219.927686 8060.564777 8899.765278 6566.71963 7666.04135 7484.448241 4925.457227 9411.600679 8194.301753 1.088910183 1.12516331 0.983679271 1.086091963 0.80137635 0.935533201 0.9133723 0.601083213 1.14855432 1 13.00040531 -6.248745538 24.36908916 0.882487344 1.068598358 0.269352499 0.136112209 682.4700991 1310175.016 0.03846097 0.049293389 5.64E-07 6.248745538 0.186111015 S(ph)SPGPDTLVVLEFNPASK ddPTM_A459_MK2206_30min_R1 1 SSPGPDTLVVLEFNPASK 18 0 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 S(0.5)S(0.5)PGPDTLVVLEFNPASK 248.75 7.38E-33 16178000 4073.4 3922.2 4795.3 3218.7 3627.7 3632.9 5164.8 3444.1 4875.1 5218.6 TRUE FALSE 3726.93594 3666.864067 4469.808396 3466.604832 3483.201027 3838.591659 4820.265616 3413.988597 5381.884091 5865.119566 0.635440744 0.625198519 0.762100132 0.591054418 0.593884061 0.654477989 0.821852916 0.582083376 0.917608589 1 12.5179448 -8.391127164 4.397610415 0.995501332 0.661991263 0.727823708 0.07406614 0.111369987 3.220546637 0.071091684 0.018645575 4.06E-09 8.391127164 -0.333510068 S(ph)SPGPDTLVVLEFNPASK ddPTM_A459_MK2206_30min_R2 3 SSPGPDTLVVLEFNPASK 18 0 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 S(0.5)S(0.5)PGPDTLVVLEFNPASK;S(0.477)S(0.477)PGPDT(0.045)LVVLEFNPASK;S(0.477)S(0.477)PGPDT(0.046)LVVLEFNPASK 163.18 5.68E-06 8448800 76277 82943 75011 91225 87627 80833 91095 71863 71727 89383 TRUE FALSE 82116.82577 78824.17123 77511.8293 83771.62569 84186.32369 83909.15646 79134.11708 81255.74084 77965.68481 86466.44003 0.949695925 0.911615781 0.896438309 0.968833985 0.973630043 0.970424553 0.91520036 0.939737323 0.90168723 1 16.39985267 -5.765306648 24.99997463 0.950313864 0.918486583 0.205192487 0.029960845 167.6961928 1084086.239 0.008619683 0.013343019 1.72E-06 5.765306648 -0.031827281 S(ph)SPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR ddPTM_A459_MK2206_30min_R1 2 SSPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR 36 1 P40222 P40222 TXLNA Alpha-taxilin 1 S(0.5)S(0.5)PGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR;S(0.5)S(0.5)PGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR 129.59 1.14E-29 49809000 208.019 375 447.65 314.27 359.02 207.716 437.73 246.21 284.55 145.4 TRUE FALSE 190.3258917 350.5874318 417.2647652 338.4751299 344.7194732 219.4767004 408.5298304 244.0574119 314.1299908 163.4132497 1.164690697 2.145403953 2.553432882 2.071283268 2.109495245 1.343077754 2.499979843 1.493498308 1.922304289 1 7.352381153 -9.510118764 0.546440631 0.922706233 2.002417913 0.284123361 0.439515592 5.303474159 1.923442269 1.338076685 0.197549482 3.09E-10 9.510118764 1.079711679 S(ph)SPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR ddPTM_A459_MK2206_30min_R2 2 SSPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR 36 1 P40222 P40222 TXLNA Alpha-taxilin 1 S(0.5)S(0.5)PGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR;S(0.737)S(0.263)PGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR 96.931 5.95E-14 110734000 18786.1 15739.5 13492.3 19219.6 17629.2 25315 23013 14688.4 11566.2 19964.9 TRUE FALSE 20224.37826 14957.89932 13942.12655 17649.2972 16936.98903 26278.38006 19991.36546 16608.22431 12572.20717 19313.44695 1.047165652 0.774481083 0.721887014 0.913834659 0.876953196 1.360626103 1.035100855 0.859930615 0.650956155 1 14.23731805 -4.469409282 13.61618165 0.916797735 1.743833311 0.044724186 0.187522821 867494.2348 7532758.531 0.050526643 18303201.87 3.39E-05 4.469409282 0.827035576 S(ph)SPGQTPEEGAQALAEFAALHGPALR ddPTM_A459_MK2206_30min_R1 3 SSPGQTPEEGAQALAEFAALHGPALR 26 0 Q14166 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 1 S(0.496)S(0.496)PGQT(0.007)PEEGAQALAEFAALHGPALR;S(0.469)S(0.469)PGQT(0.061)PEEGAQALAEFAALHGPALR;S(0.5)S(0.5)PGQT(0.001)PEEGAQALAEFAALHGPALR 224.91 1.44E-36 113323000 4597.1 4514.2 4710.9 4494.9 5186.2 4644.91 4754.4 5008.9 4075.93 3548.62 TRUE FALSE 4206.092505 4220.32476 4391.137233 4841.097977 4979.622672 4907.90079 4437.242651 4965.107715 4499.637509 3988.249836 1.054621119 1.058189665 1.101018596 1.213840199 1.248573403 1.230590106 1.112578909 1.244933973 1.12822358 1 11.96154007 -5.586588972 4.27699396 1.181903446 1.060430194 0.271675645 0.072638649 0.226937846 8.288034859 0.019078025 0.035159708 2.59E-06 5.586588972 -0.121473252 S(ph)SPGQTPEEGAQALAEFAALHGPALR ddPTM_A459_MK2206_30min_R2 6 SSPGQTPEEGAQALAEFAALHGPALR 26 0 Q14166 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 1 S(0.47)S(0.47)PGQT(0.059)PEEGAQALAEFAALHGPALR;S(0.48)S(0.48)PGQT(0.04)PEEGAQALAEFAALHGPALR;S(0.408)S(0.408)PGQT(0.184)PEEGAQALAEFAALHGPALR;S(0.405)S(0.405)PGQT(0.19)PEEGAQALAEFAALHGPALR;S(0.489)S(0.489)PGQT(0.023)PEEGAQALAEFAALHGPALR;S(0.443)S(0.443)PGQT(0.114)PEEGAQALAEFAALHGPALR 193.96 2.44E-28 188399600 110381.7 147152.6 130059.3 147628 135659 154076.8 137092.6 101654.2 121325.9 126545.4 TRUE FALSE 118832.6078 139845.2159 134395.4121 135566.3202 130332.346 159940.3006 119092.1769 114940.753 131878.6075 122416.234 0.970725891 1.14237476 1.097856124 1.107421097 1.064665542 1.306528517 0.972846273 0.938933908 1.077296721 1 16.90143537 S(ph)SPHGSLGSVVNSLSGLK ddPTM_A459_MK2206_30min_R2 1 SSPHGSLGSVVNSLSGLK 18 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5;A0A0A0MRX3 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.369)S(0.369)PHGS(0.262)LGSVVNSLSGLK 103.73 0.0013132 2063000 8168.3 15408 10176 20163 18400 27125 25199 13341 20415 14599 TRUE FALSE 8793.671328 14642.86113 10515.26276 18515.6184 17677.52355 28157.26088 21890.34103 15084.71451 22190.6598 14122.63583 0.622665021 1.036836275 0.744568004 1.31105968 1.251715598 1.993768106 1.550018092 1.068123167 1.571283156 1 13.78572176 -5.882625657 2.839764841 1.441081935 0.817742905 0.471942907 0.284048951 0.232579531 3.779681557 0.085478464 0.13847319 1.31E-06 5.882625657 -0.623339031 S(ph)SPINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSGGATNHISGNK ddPTM_A459_MK2206_30min_R2 1 SSPINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSGGATNHISGNK 46 0 Q9NZB2-4;Q9NZB2;A0A0C4DH52;Q9NZB2-2;Q9NZB2-5 Q9NZB2-4 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 S(0.437)S(0.437)PINPAQS(0.062)GS(0.062)PNHVDS(0.001)AY(0.001)FPGSSTSSSSDNDEGSGGATNHISGNK 71.344 3.99E-10 8745000 457.67 4294.9 888.84 9679.7 10252 21792 8560.4 3728.7 9856.3 981.84 TRUE FALSE 492.7095671 4081.621511 918.473482 8888.837546 9849.454968 22621.30983 7436.409197 4216.053893 10713.58316 949.8026412 0.518749418 4.297336451 0.967015085 9.358615317 10.37000166 23.81685294 7.829425687 4.438873624 11.27979929 1 9.891483958 -1.698813205 19.33675448 7.825225811 3.962952383 0 6.688872438 0 0 1.627756702 0 0.020007222 1.698813205 -3.862273428 S(ph)SPKEELHPAAPSQLAPSFSSSSSSSSGPR ddPTM_A459_MK2206_30min_R2 2 SSPKEELHPAAPSQLAPSFSSSSSSSSGPR 30 1 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 S(0.5)S(0.5)PKEELHPAAPSQLAPSFSSSSSSSSGPR;S(0.498)S(0.498)PKEELHPAAPS(0.004)QLAPSFSSSSSSSSGPR 74.766 2.08E-05 15680200 23498.7 29994.4 22504.3 24508 27636.7 21989.8 31815.9 25341.6 25832.9 28028.7 TRUE FALSE 25297.77854 28504.92171 23254.58213 22505.618 26551.54429 22826.63725 27638.43411 28653.83413 28079.79895 27114.12581 0.933011033 1.051294145 0.857655611 0.830032956 0.97925135 0.841872513 1.01933709 1.056786205 1.035615131 1 14.72675704 -7.40637058 7.177410471 1.035243919 0.918270072 0.427018681 0.063763004 0.261378536 14.51930006 0.027854122 0.018662166 3.92E-08 7.40637058 -0.116973846 S(ph)SPLLR ddPTM_A459_MK2206_30min_R2 3 SSPLLR 6 0 P56524-2;P56524;Q9UKV0-10;Q9UKV0-3;Q9UKV0-4;Q9UKV0-2;Q9UKV0;Q9UQL6-2;Q9UKV0-5;Q9UKV0-7;Q9UQL6;Q9UQL6-3 P56524-2 HDAC4;HDAC9;HDAC5 Histone deacetylase 4;Histone deacetylase 9;Histone deacetylase 5 1 S(0.999)S(0.001)PLLR;S(0.999)S(0.001)PLLR;S(0.997)S(0.003)PLLR 116.9 0.022728 13420600 60305 67103 63031 69144 51780 57422 64656 42431 52433 59284 TRUE FALSE 64921.99717 63770.7626 65132.42208 63494.71402 49746.85703 59607.23445 56166.58953 47976.87739 56993.52756 57349.56794 1.132039865 1.111965877 1.135709028 1.107152439 0.867432115 1.039366757 0.979372497 0.836569117 0.993791751 1 15.807495 -6.167936333 6.796607974 0.950515708 1.123846504 0.672437531 0.057811074 0.150255928 9.337975531 0.016974071 0.021996933 6.79E-07 6.167936333 0.173330796 S(ph)SPLPAK ddPTM_A459_MK2206_30min_R1 2 SSPLPAK 7 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 S(0.931)S(0.069)PLPAK;S(0.937)S(0.063)PLPAK 118.74 0.01065 149454000 21941.9 22094.8 23420 16931.1 18825.7 17180 27721 23073 16556.3 33147 TRUE FALSE 20075.62618 20656.4245 21830.31565 18235.13626 18075.8325 18152.71675 25871.78267 22871.27519 18277.38663 37253.50061 0.538892342 0.554482778 0.585993673 0.489487859 0.48521165 0.487275463 0.694479237 0.61393627 0.490621991 1 15.18508838 -14.52287875 0.339377148 5.828946162 0.535650825 0.811866808 0.065036455 169.7797695 1.43353645 593.8067944 0.055576386 3.00E-15 14.52287875 -5.293295337 S(ph)SPLPAK ddPTM_A459_MK2206_30min_R2 3 SSPLPAK 7 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 S(0.5)S(0.5)PLPAK;S(0.999)S(0.001)PLPAK;S(0.995)S(0.005)PLPAK 126.52 0.0056688 178989000 1207150 1040680 1126140 1071050 1016210 920171 1467460 980360 808275 1332350 TRUE FALSE 1299570.332 989001.3445 1163684.946 983541.7889 976308.4894 955188.7522 1274780.739 1108496.418 878577.2985 1288875.529 1.008297778 0.767336583 0.902868368 0.763100677 0.757488576 0.741102404 0.989064274 0.860049239 0.681661866 1 20.29768151 -10.18522023 18.39202202 0.999999998 0.829232964 0.1954872 0.10338191 0 0 0.09830024 0.02384131 6.53E-11 10.18522023 -0.170767035 S(ph)SPLSWR ddPTM_A459_MK2206_30min_R1 2 SSPLSWR 7 0 A0A0A0MRJ3;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-6 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 S(0.866)S(0.134)PLSWR;S(0.993)S(0.007)PLSWR 158.07 0.0011366 16869100 9336.1 9061.6 9552.7 8654.7 9137.7 8797.2 9735.9 9185.3 9109.4 8875.5 TRUE FALSE 8542.015669 8471.688193 8904.289339 9321.286494 8773.72606 9295.289862 9086.435875 9104.99389 10056.35473 9975.063947 0.856336933 0.849286605 0.892654863 0.934458821 0.879565896 0.931852659 0.91091505 0.912775491 1.0081494 1 13.28411037 -1.522879044 0.088395525 1.077396342 0.442546737 0.719570864 0.02701928 87.54542367 0.559873896 0.538456132 6.74317138 0.029999979 1.522879044 -0.634849605 S(ph)SPLSWR ddPTM_A459_MK2206_30min_R2 2 SSPLSWR 7 0 A0A0A0MRJ3;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-6 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 S(0.871)S(0.123)PLS(0.005)WR;S(0.866)S(0.134)PLS(0.001)WR 115.49 0.013004 13222400 63106 79752 73174 79305 68572 60566 78367 64659 64959 83516 TRUE FALSE 67937.44388 75791.63165 75613.58464 72825.52782 65879.51873 62870.88157 68077.31876 73110.15331 70609.0164 80790.87976 0.840904866 0.938121133 0.935917332 0.901407783 0.81543262 0.778192808 0.842636186 0.904930773 0.873972614 1 16.30190482 -9.192164117 1.333709955 1.000028994 0.869261138 0.386811053 0.049139853 5.701782934 10.20136829 0.05449529 0.015924894 6.42E-10 9.192164117 -0.130767856 S(ph)SPNPFITGLTR ddPTM_A459_MK2206_30min_R1 2 SSPNPFITGLTR 12 0 J3KQV8;O43426;A0A0D9SGJ6 J3KQV8 SYNJ1 Synaptojanin-1 1 S(0.5)S(0.5)PNPFITGLTR;S(0.849)S(0.151)PNPFITGLTR 167.03 0.00044373 44695000 4172.5 3910.2 4783.2 3921.6 4650 3815.6 4453.6 4400.8 3981.8 4077.5 TRUE FALSE 3817.606964 3655.645269 4458.529711 4223.642311 4464.780653 4031.635975 4156.50847 4362.32427 4395.722359 4582.651484 0.83305636 0.797714005 0.972914857 0.921659072 0.974278902 0.879760547 0.907009509 0.951921455 0.959209395 1 12.16196686 -5.257334091 24.98810114 0.940531811 0.815385171 0.692347931 0.034641284 188.3322607 1146331.702 0.008820516 0.021668983 5.53E-06 5.257334091 -0.12514664 S(ph)SPNPFITGLTR ddPTM_A459_MK2206_30min_R2 2 SSPNPFITGLTR 12 0 J3KQV8;O43426;A0A0D9SGJ6 J3KQV8 SYNJ1 Synaptojanin-1 1 S(0.928)S(0.072)PNPFITGLTR;S(0.985)S(0.015)PNPFITGLTR 198.48 0.00012564 14124100 57798 68847 55680 75235 79936 62995 72440 67032 62613 71796 TRUE FALSE 62223.05932 65428.15809 57536.34341 69088.05984 76797.31099 65392.31887 62928.54098 75793.31256 68058.96556 69453.3024 0.895897778 0.942045314 0.828417677 0.994741178 1.105740236 0.941529295 0.906055419 1.091284502 0.97992411 1 16.08375567 -5.860533186 8.147965513 1.004928206 0.894452205 0.412734481 0.062230244 0.251155532 18.28251677 0.017935258 0.026706354 1.38E-06 5.860533186 -0.110476001 S(ph)SPNVANQPPS(ph)PGGK ddPTM_A459_MK2206_30min_R2 3 SSPNVANQPPSPGGK 15 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 2 S(0.774)S(0.226)PNVANQPPS(1)PGGK;S(0.767)S(0.233)PNVANQPPS(1)PGGK;S(0.76)S(0.24)PNVANQPPS(1)PGGK 195.55 3.02E-19 15284800 177192 176628 161796 165233 164654 157083 186111 144747 137317 173748 TRUE FALSE 190757.9558 167856.9104 167190.1979 151732.9353 158188.8566 163060.9036 161674.4021 163665.9299 149260.5844 168078.617 1.134932921 0.998680935 0.994714265 0.902749785 0.941159914 0.970146629 0.961897504 0.973746291 0.888040294 1 17.35877667 -4.424857441 1.323960982 0.949853267 1.383804447 0.727341078 0.033537303 1.519792595 1.266631578 0.009507422 1.117459976 3.76E-05 4.424857441 0.43395118 S(ph)SPNVANQPPSPGGK ddPTM_A459_MK2206_30min_R2 1 SSPNVANQPPSPGGK 15 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(0.713)S(0.287)PNVANQPPSPGGK 157.09 0.00015778 25166000 43144 46266 49856 47259 42516 40313 51285 41352 48201 49044 TRUE FALSE 46447.13781 43968.49772 51518.17416 43397.78853 40846.60821 41847.13946 44551.2179 46756.84838 52393.43585 47443.6983 0.978994882 0.926751061 1.085880233 0.914721872 0.860949076 0.882037888 0.939033412 0.985522842 1.104328662 1 15.53392885 -8.020381557 4.413372706 1.052323987 0.940599749 0.333563631 0.062258207 0.245710762 11.51024981 0.044909956 0.017452923 9.54E-09 8.020381557 -0.111724237 S(ph)SPPAPPLPPGSGSPGTPQALPR ddPTM_A459_MK2206_30min_R1 1 SSPPAPPLPPGSGSPGTPQALPR 23 0 A0A2R8Y5V0;Q9Y3L3 A0A2R8Y5V0 SH3BP1 SH3 domain-binding protein 1 1 S(0.5)S(0.5)PPAPPLPPGSGSPGTPQALPR 206.67 8.77E-24 4677500 762.27 542.08 567.46 403.87 577.25 545.1 623.56 416.12 469.36 423.99 TRUE FALSE 697.4349337 506.7904935 528.9423962 434.9761374 554.2569102 575.9630909 581.9634501 412.4819067 518.1516516 476.5170822 1.463609511 1.06353059 1.110017701 0.912823808 1.163141744 1.208693481 1.221285599 0.8656183 1.087372669 1 8.896384122 -4.760472144 24.95482734 1.074344737 1.46360998 0.528141974 0.11147566 19.72220437 508568.8284 0.028657472 0.169468233 1.74E-05 4.760472144 0.389265243 S(ph)SPPAPPLPPGSGSPGTPQALPR ddPTM_A459_MK2206_30min_R2 2 SSPPAPPLPPGSGSPGTPQALPR 23 0 A0A2R8Y5V0;Q9Y3L3 A0A2R8Y5V0 SH3BP1 SH3 domain-binding protein 1 1 S(0.499)S(0.499)PPAPPLPPGS(0.001)GS(0.001)PGTPQALPR;S(0.5)S(0.5)PPAPPLPPGSGSPGTPQALPR 202.81 4.05E-23 9322000 20047.3 26503.3 21070.4 26662 24319.6 27649.2 26783.1 24817.8 22124.7 25663.6 TRUE FALSE 21582.1367 25187.18466 21772.87662 24483.62931 23364.69031 28701.40968 23266.4468 28061.57167 24049.06641 24826.19883 0.869329084 1.014540519 0.877012094 0.98620129 0.941130395 1.156093604 0.937173143 1.130320911 0.968697084 1 14.59957577 -6.618406273 24.99996736 1.041200975 0.941199285 0.312764231 0.074571086 17.7330004 4628.196865 0.022447587 0.022447585 2.41E-07 6.618406273 -0.10000169 S(ph)SPPFWALPPSAPSER ddPTM_A459_MK2206_30min_R2 1 SSPPFWALPPSAPSER 16 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 S(0.5)S(0.5)PPFWALPPSAPSER 122.33 0.0014545 2388700 7431.2 8318 6924.1 7220.5 6750.2 7462.7 6402.7 4252 6596 6178.5 TRUE FALSE 8000.138386 7904.940216 7154.946038 6630.562053 6485.153231 7746.698278 5562.017799 4807.750999 7169.708157 5976.896051 1.338510544 1.32258285 1.197100632 1.109365463 1.085036978 1.296107246 0.930586336 0.804389261 1.199570495 1 12.54518074 -5.174286603 0.407192805 0.979903168 1.551279042 0.459900411 0.12354581 3.766066469 0.624454236 0.109000798 1.017636575 6.69E-06 5.174286603 0.571375875 S(ph)SPPGHYYQK ddPTM_A459_MK2206_30min_R2 1 SSPPGHYYQK 10 0 D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;D6RDK6;D6RBN5;Q9NX40-3;Q9NX40-2;Q9NX40-4;Q9NX40 D6RI08 OCIAD1 OCIA domain-containing protein 1 1 S(0.872)S(0.128)PPGHYYQK 103.44 0.0094059 7603200 99778 82034 74086 92942 72417 77937 110060 82280 60921 99364 TRUE FALSE 107417.0804 77960.31085 76555.99026 85348.34129 69573.54471 80902.94715 95608.98979 93034.27851 66219.79846 96121.76082 1.117510535 0.811057873 0.796448063 0.887919037 0.72380639 0.841671506 0.994665401 0.967879466 0.688915787 1 16.55257546 -9.705372656 15.58911547 1.000007554 0.868031468 0.091566913 0.12271488 0 0 0.117321808 0.028454718 1.97E-10 9.705372656 -0.131976086 S(ph)SPPLPPPAEER ddPTM_A459_MK2206_30min_R1 4 SSPPLPPPAEER 12 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 S(0.862)S(0.138)PPLPPPAEER;S(0.908)S(0.092)PPLPPPAEER;S(0.996)S(0.004)PPLPPPAEER;S(0.985)S(0.015)PPLPPPAEER 168.83 0.0003725 119810000 13040.6 14117.1 12983.3 10619.5 14185.9 12690.8 13605.1 12405.2 10836.2 10642.4 TRUE FALSE 11931.42849 13198.07422 12102.02977 11437.41573 13620.84556 13409.34213 12697.5286 12296.74264 11962.66177 11960.86086 0.997539277 1.103438488 1.011802571 0.956236835 1.138784718 1.121101757 1.06158986 1.02808174 1.000150567 1 13.54603361 -8.002836048 3.118463161 1.001204993 1.057634788 0.147707672 0.053621533 0.539025442 10.41396061 0.041795501 0.015369074 9.93E-09 8.002836048 0.056429796 S(ph)SPPLPPPAEER ddPTM_A459_MK2206_30min_R2 3 SSPPLPPPAEER 12 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 S(0.993)S(0.007)PPLPPPAEER;S(0.856)S(0.144)PPLPPPAEER;S(0.5)S(0.5)PPLPPPAEER 174.23 2.98E-08 117979000 105870 126250 115594 131634 131483 129607 121367 100952 99741 102455 TRUE FALSE 113975.4886 119980.6086 119447.8463 120879.0811 126320.3168 134539.2852 105431.3671 114146.773 108416.2919 99111.90174 1.149967729 1.210557022 1.20518166 1.219622255 1.274522177 1.357448327 1.063760913 1.151695922 1.093877627 1 16.59677069 -8.037625672 1.082312069 1.020739082 1.2278549 0.529998607 0.067886143 0.411453691 0.895170874 0.065258018 0.023146477 9.17E-09 8.037625672 0.207115818 S(ph)SPPLRTPDVLESSGPAVR ddPTM_A459_MK2206_30min_R1 3 SSPPLRTPDVLESSGPAVR 19 1 E9PJN1;O75676-2;O75676;A0A0A6YYC0 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 S(0.396)S(0.396)PPLRT(0.079)PDVLES(0.103)S(0.026)GPAVR;S(0.499)S(0.499)PPLRT(0.001)PDVLESSGPAVR;S(0.803)S(0.191)PPLRT(0.005)PDVLESSGPAVR 98.552 0.00079376 47278300 2455.69 2941.28 2844.41 2793.57 2503.7 2655.38 2455.33 2600.04 1888.2 1169.5 TRUE FALSE 2246.82067 2749.802137 2651.339374 3008.731245 2403.972327 2805.725321 2291.539416 2577.308124 2084.485147 1314.386489 1.709406395 2.092080343 2.017168767 2.289076516 1.82896914 2.134627329 1.743428919 1.960844961 1.585899706 1 10.36017384 -8.778866202 0.843746718 0.993666179 2.015383699 0.761742708 0.168702745 0.441055219 0.617549517 0.157189398 0.054246512 1.66E-09 8.778866202 1.02171752 S(ph)SPPPGYIPDELHQVAR ddPTM_A459_MK2206_30min_R2 2 SSPPPGYIPDELHQVAR 17 0 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 S(0.801)S(0.199)PPPGYIPDELHQVAR;S(0.5)S(0.5)PPPGYIPDELHQVAR 116.69 0.0010664 8650100 21571 22574 21685.5 23951 19001 18657.1 24151 18356.6 17624.3 24014 TRUE FALSE 23222.49235 21453.00799 22408.48375 21994.12668 18254.92527 19367.10901 20979.94469 20755.87065 19157.22976 23230.42515 0.999658517 0.923487532 0.964617892 0.946781066 0.785819681 0.833695849 0.903123579 0.893477864 0.824661178 1 14.50372794 -6.037299928 22.57697087 0.867510499 0.958181551 0.350459274 0.056669558 186.420098 112836.3559 0.016185742 0.020906361 9.18E-07 6.037299928 0.090671052 S(ph)SPPPGYVPER ddPTM_A459_MK2206_30min_R1 2 SSPPPGYVPER 11 0 J3KRN4;J3QRB6;Q99759;Q99759-2 J3KRN4 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 1 S(0.85)S(0.15)PPPGYVPER;S(0.5)S(0.5)PPPGYVPER 131.42 0.0022067 28186000 3218.4 2686.3 3431.1 2736.3 3599.2 3634.3 3977.5 3301.2 3274.6 3217.5 TRUE FALSE 2944.65818 2511.421382 3198.206492 2947.0503 3455.836243 3840.070925 3712.168232 3272.337956 3615.006388 3616.108191 0.814316946 0.69450947 0.884433298 0.814978464 0.955678332 1.061934744 1.026564482 0.904933642 0.999695307 1 11.82022213 -6.187634375 1.885311449 0.996698045 0.783923489 0.727115221 0.057195087 0.186013506 1.302470818 0.020163655 0.028010896 6.49E-07 6.187634375 -0.212774556 S(ph)SPPPGYVPER ddPTM_A459_MK2206_30min_R2 1 SSPPPGYVPER 11 0 J3KRN4;J3QRB6;Q99759;Q99759-2 J3KRN4 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 1 S(0.5)S(0.5)PPPGYVPER 103.43 0.013295 13521000 27071 31419 31637 29832 27610 23312 29988 26438 24492 26914 TRUE FALSE 29143.57657 29858.77815 32691.76179 27394.63017 26525.89267 24199.1545 26050.53958 29893.53738 26622.26989 26035.79838 1.119365581 1.146835511 1.255646603 1.052190901 1.018823862 0.929456978 1.000566189 1.148170566 1.022525582 1 14.66820903 -5.910317199 6.908812191 1.023055961 1.170561779 0.569888829 0.05995551 0.173965999 11.2764128 0.018219264 0.027186883 1.23E-06 5.910317199 0.147505819 S(ph)SPPSAGNSPSSLK ddPTM_A459_MK2206_30min_R1 1 SSPPSAGNSPSSLK 14 0 P57682;P57682-2 P57682 KLF3 Krueppel-like factor 3 1 S(0.89)S(0.11)PPSAGNSPSSLK 155.37 7.50E-05 0 1908.9 1571.4 1451.9 1257.5 2471.1 2034.5 2691.7 2079.1 1198.3 1592.9 TRUE FALSE 1746.538031 1469.101574 1353.349073 1354.352868 2372.670854 2149.691632 2512.141604 2060.922648 1322.867573 1790.240478 0.975588505 0.820616891 0.755959375 0.756520079 1.325336391 1.200783726 1.403242545 1.151198777 0.738932892 1 10.80593768 -6.250879804 24.88352538 1.160685404 0.821616471 0.411379451 0.179887073 655.1973336 1543964.952 0.055377464 0.070730933 5.61E-07 6.250879804 -0.339068933 S(ph)SPPSAGNSPSSLK ddPTM_A459_MK2206_30min_R2 1 SSPPSAGNSPSSLK 14 0 P57682;P57682-2 P57682 KLF3 Krueppel-like factor 3 1 S(0.983)S(0.017)PPSAGNSPSSLK 167.03 0.00022203 7977800 43260 57514 51184 65424 52792 45396 56788 54829 38643 49376 TRUE FALSE 46572.01886 54657.93839 52890.44901 60078.64992 50719.12082 47123.57659 49331.66739 61995.33856 42004.09829 47764.86516 0.9750267 1.144312628 1.107308664 1.257800053 1.061849974 0.986574052 1.0328024 1.297927637 0.879393214 1 15.54366217 -6.486234665 24.7654671 1.053846918 1.126538465 0.090829734 0.117791603 1445.230908 976742.834 0.03607651 0.040894959 3.26E-07 6.486234665 0.072691547 S(ph)SPQHSLSNPLPR ddPTM_A459_MK2206_30min_R1 1 SSPQHSLSNPLPR 13 0 Q86UE8-2;Q86UE8 Q86UE8-2 TLK2 Serine/threonine-protein kinase tousled-like 2 1 S(0.873)S(0.122)PQHS(0.003)LS(0.002)NPLPR 106.54 0.0069233 8791400 1948.2 2080.2 1871.6 1661.2 2184.1 1591.6 1758 1940.2 1737.7 1663.2 TRUE FALSE 1782.49536 1944.778602 1744.561007 1789.145912 2097.102672 1681.715017 1640.727028 1923.237036 1918.340133 1869.249773 0.953588646 1.040405959 0.933294754 0.957146518 1.121895374 0.899673784 0.877746276 1.028881781 1.026262066 1 10.86824364 S(ph)SPQHSLSNPLPR ddPTM_A459_MK2206_30min_R2 1 SSPQHSLSNPLPR 13 0 Q86UE8-2;Q86UE8 Q86UE8-2 TLK2 Serine/threonine-protein kinase tousled-like 2 1 S(0.867)S(0.101)PQHS(0.025)LS(0.007)NPLPR 128.95 0.0017746 6134400 9919.8 16342 14918 10899 16758 17171 15835 11889 12752 11284 TRUE FALSE 10679.26752 15530.48004 15415.35867 10008.51684 16099.99672 17824.45444 13755.84548 13442.93312 13861.14591 10915.804 0.978330823 1.422751823 1.41220552 0.916883157 1.474925412 1.632903488 1.260177031 1.231511038 1.269823634 1 13.41413078 -8.992471469 1.22115232 1.000478582 1.306463697 0.149516465 0.206312755 3.721124715 7.653482723 0.202154192 0.061047155 1.02E-09 8.992471469 0.305985114 S(ph)SPQLDPLR ddPTM_A459_MK2206_30min_R1 4 SSPQLDPLR 9 0 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 S(0.804)S(0.196)PQLDPLR;S(0.97)S(0.03)PQLDPLR;S(0.981)S(0.019)PQLDPLR;S(0.868)S(0.132)PQLDPLR 177.04 0.00058696 304304000 21544.1 21158.7 20133.1 15537.6 18586.6 20459.7 24620.3 17799 23891.9 27672.9 TRUE FALSE 19711.66116 19781.26478 18766.52127 16734.30864 17846.25636 21618.11053 22977.92471 17643.38522 26375.5485 31101.22777 0.633790451 0.636028421 0.6034013 0.538059422 0.573811957 0.695088653 0.738810856 0.567289026 0.848054897 1 14.92468391 -8.664863591 0.82621414 1.006109571 0.609956082 0.77401931 0.065227502 0.38691518 0.561855325 0.065041187 0.023060891 2.16E-09 8.664863591 -0.396153489 S(ph)SPQLDPLR ddPTM_A459_MK2206_30min_R2 3 SSPQLDPLR 9 0 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 S(0.874)S(0.126)PQLDPLR;S(0.654)S(0.346)PQLDPLR;S(0.853)S(0.147)PQLDPLR 134.38 0.0028962 509174000 364343 292195 290779 332657 255917 269813 371146 287716 231243 328515 TRUE FALSE 392237.3802 277685.0212 300473.4267 305477.859 245868.4127 280080.9228 322414.0844 325321.4691 251356.0981 317795.5825 1.234244281 0.873785026 0.945492774 0.961240105 0.773668441 0.881324154 1.014532933 1.023681533 0.790936413 1 18.27773954 -4.756477805 24.99907211 0.918560119 1.234244765 0.56166476 0.083733777 118.255971 595768.9054 0.021090255 0.170286353 1.75E-05 4.756477805 0.315684646 S(ph)SPQLDPLRK ddPTM_A459_MK2206_30min_R2 1 SSPQLDPLRK 10 1 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 S(0.661)S(0.339)PQLDPLRK 85.672 0.018551 1040300000 189160 172870 191340 186960 157010 127270 185220 180590 115370 175020 TRUE FALSE 203642.235 164285.5272 197719.1801 171684.7699 150844.9985 132113.349 160900.3915 204193.7331 125404.6741 169309.1117 1.202783672 0.970328918 1.167799997 1.014031485 0.890944362 0.780308559 0.950335099 1.206041016 0.740684732 1 17.36930009 -6.000214034 5.391526785 0.933219451 1.099192014 0.283093944 0.131739961 0.245688669 23.66528208 0.038331288 0.054410555 1.00E-06 6.000214034 0.165972563 S(ph)SPQLDPLRKS(ph)PTMEQAVQTASAHLPAPAAVGR ddPTM_A459_MK2206_30min_R1 1 SSPQLDPLRKSPTMEQAVQTASAHLPAPAAVGR 33 2 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 2 S(0.454)S(0.454)PQLDPLRKS(0.756)PT(0.247)MEQAVQT(0.06)AS(0.03)AHLPAPAAVGR 45.685 0.01705 3564300 241.32 263.97 179.71 260.12 485.15 486.95 350.27 374.03 246.94 237.23 TRUE FALSE 220.7944668 246.785505 167.5117859 280.1544875 465.8254482 514.5206882 326.9041274 370.7598951 272.6102967 266.6198434 0.828124659 0.925608169 0.628279515 1.050763829 1.747152208 1.929791428 1.226105766 1.390593777 1.022468145 1 8.058640348 -6.028469303 6.653420107 1.423953823 0.810709251 0.473180832 0.280820222 0.161656171 25.8713297 0.086179469 0.115825498 9.37E-07 6.028469303 -0.613244571 S(ph)SPQLDPLRKS(ph)PTMEQAVQTASAHLPAPAAVGR ddPTM_A459_MK2206_30min_R2 1 SSPQLDPLRKSPTMEQAVQTASAHLPAPAAVGR 33 2 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 2 S(0.478)S(0.478)PQLDPLRKS(0.729)PT(0.272)MEQAVQT(0.039)AS(0.003)AHLPAPAAVGR 61.597 0.0013775 16131000 5929.3 16722 9966.7 17781 22323 18478 20993 14401 17025 14303 TRUE FALSE 6383.251767 15891.6098 10298.9848 16328.23542 21446.48686 19181.19324 18236.59388 16283.26015 18505.80373 13836.29428 0.461341139 1.14854523 0.744345603 1.180101774 1.550016675 1.386295553 1.318025875 1.176851245 1.337482663 1 13.75616998 -5.878576708 4.582399467 1.313647005 0.822678733 0.547524821 0.206046433 0.158604249 5.622739324 0.056614903 0.086527842 1.32E-06 5.878576708 -0.490968272 S(ph)SPSARPPDVPGQQPQAAK ddPTM_A459_MK2206_30min_R1 2 SSPSARPPDVPGQQPQAAK 19 1 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 S(0.499)S(0.499)PS(0.001)ARPPDVPGQQPQAAK;S(0.46)S(0.46)PS(0.081)ARPPDVPGQQPQAAK 130.01 0.0001629 52955000 5208.4 5418 5777.9 4552.8 4727.9 4206 5650.1 4925.9 5342.5 5567.3 TRUE FALSE 4765.39823 5065.287215 5385.712246 4903.457445 4539.577732 4444.140085 5273.192138 4882.833376 5897.871993 6257.019155 0.761608381 0.809536792 0.860747284 0.783673076 0.725517634 0.71026474 0.842764263 0.780376926 0.942600917 1 12.61125981 -8.365029833 2.894254111 0.999756756 0.784012233 0.74387483 0.044396871 0.135019098 2.104005559 0.045702717 0.01246964 4.31E-09 8.365029833 -0.215744522 S(ph)SPSARPPDVPGQQPQAAK ddPTM_A459_MK2206_30min_R2 3 SSPSARPPDVPGQQPQAAK 19 1 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 S(0.442)S(0.442)PS(0.117)ARPPDVPGQQPQAAK;S(0.5)S(0.5)PS(0.001)ARPPDVPGQQPQAAK;S(0.495)S(0.495)PS(0.011)ARPPDVPGQQPQAAK 151.21 1.25E-05 141031000 79525 70013 72059 80021 68233 61646.3 81615 66460 61675 83994 TRUE FALSE 85613.49514 66536.25623 74461.41109 73483.02833 65553.82958 63992.29314 70898.85246 75146.55019 67039.38002 81253.28266 1.053661986 0.818874685 0.916411112 0.904369964 0.806783768 0.787565635 0.872566008 0.924843252 0.825066727 1 16.31013848 -4.751953657 24.94478221 0.868186975 1.053662363 0.429329998 0.062289472 347.3089817 913258.62 0.015152139 0.18940561 1.77E-05 4.751953657 0.185475388 S(ph)SPSHSTTSGETDPTTIFPCK ddPTM_A459_MK2206_30min_R2 2 SSPSHSTTSGETDPTTIFPCK 21 0 Q05GC8;Q96PN7-2;Q96PN7-3;Q96PN7-4;Q96PN7-5;Q96PN7 Q05GC8 BCAR2;TRERF1 Transcriptional-regulating factor 1 1 S(0.339)S(0.339)PS(0.085)HS(0.077)T(0.077)T(0.059)S(0.021)GET(0.002)DPTTIFPCK;S(0.44)S(0.44)PS(0.012)HS(0.09)T(0.018)T(0.001)SGETDPTTIFPCK 156.23 1.24E-07 8641600 21177 40406 31053 54704 56308 66117 58011 39395 47616 44245 TRUE FALSE 22798.3274 38399.4968 32088.29152 50234.50821 54097.065 68633.12877 50394.08602 44544.06176 51757.55361 42801.28927 0.532655156 0.897157479 0.749703854 1.173668108 1.263912044 1.603529471 1.177396449 1.040717757 1.209252209 1 15.38536663 -5.786122705 4.085371964 1.234325627 0.735853933 0.618890966 0.173583361 0.14271425 5.255387536 0.051627601 0.084276085 1.64E-06 5.786122705 -0.498471694 S(ph)SPSHTTNGCQGEK ddPTM_A459_MK2206_30min_R2 2 SSPSHTTNGCQGEK 14 0 Q8N8R5 Q8N8R5 C2orf69 UPF0565 protein C2orf69 1 S(0.42)S(0.42)PS(0.158)HT(0.001)TNGCQGEK;S(0.491)S(0.491)PS(0.018)HTTNGCQGEK 83.877 0.017781 3084830 5716.2 12068.1 9557.8 12028.1 14298.2 13684.8 13315 14209.6 15366.7 13157.1 TRUE FALSE 6153.836667 11468.8157 9876.452282 11045.36575 13736.78083 14205.58465 11566.72451 16066.84351 16703.26779 12727.7849 0.483496281 0.901084972 0.775975738 0.867815243 1.079275061 1.116108165 0.908777497 1.262344047 1.3123468 1 13.63569374 -4.503666952 0.409755655 1.175037463 8.82E-14 0.670954011 0.132073445 4.295818833 0.477736868 0.105725011 2.591681252 3.14E-05 4.503666952 -1.175037463 S(ph)SPSIICMPK ddPTM_A459_MK2206_30min_R1 1 SSPSIICMPK 10 0 F8VVY1;F8VX63;F8VP97;Q9NZN8-4;Q9NZN8-5;Q9NZN8;F8VQD8;A0A087X050;F8VUB4;F8VV52 F8VVY1 CNOT2 CCR4-NOT transcription complex subunit 2 1 S(0.889)S(0.111)PSIICMPK 224.75 5.71E-05 26932000 4709.6 4654.1 4327.4 3349.2 3951.8 3968.1 4919.4 3457.3 4787 4871.3 TRUE FALSE 4309.023789 4351.117244 4033.668145 3607.155964 3794.391438 4192.770393 4591.235802 3427.073191 5284.62578 5474.79342 0.787066006 0.794754598 0.73677084 0.658866132 0.693065682 0.765831707 0.838613524 0.62597306 0.965264874 1 12.41858881 -8.360213482 6.385029814 0.994008093 0.740002514 0.718048428 0.06146958 0.134343481 7.121980959 0.060291661 0.015647616 4.36E-09 8.360213482 -0.254005579 S(ph)SPSIICMPK ddPTM_A459_MK2206_30min_R2 3 SSPSIICMPK 10 0 F8VVY1;F8VX63;F8VP97;Q9NZN8-4;Q9NZN8-5;Q9NZN8;F8VQD8;A0A087X050;F8VUB4;F8VV52 F8VVY1 CNOT2 CCR4-NOT transcription complex subunit 2 1 S(0.997)S(0.003)PSIICMPK;S(0.992)S(0.008)PSIICMPK;S(0.996)S(0.004)PSIICMPK 210.08 0.00010779 42395400 269476 253749 251043 264496 240357 215452 255740 204802 182196 256965 TRUE FALSE 290107.2898 241148.1936 259412.6483 242885.8307 230919.3765 223651.1768 222161.0308 231570.3246 198043.0787 248580.2531 1.16705686 0.970101972 1.043577054 0.977092217 0.928953019 0.899714173 0.893719545 0.931571682 0.796696746 1 17.92335217 -1.522878745 0.425208094 0.895294033 5.64709721 0.618115948 0.058073241 50.78036546 0.644256164 0.037181091 206.016873 0.03 1.522878745 4.751803177 S(ph)SPSILAVQR ddPTM_A459_MK2206_30min_R1 1 SSPSILAVQR 10 0 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(0.877)S(0.121)PS(0.001)ILAVQR 192.44 0.00017533 16992000 2297.4 2290.6 2177.3 1661.6 1800.7 1706.3 2340.3 1965.8 2225.1 2073 TRUE FALSE 2101.994066 2141.481524 2029.510942 1789.57672 1728.974306 1802.909231 2184.182857 1948.613218 2456.407108 2329.81889 0.902213504 0.919162229 0.87110245 0.768118383 0.742106742 0.773840936 0.937490406 0.836379697 1.05433393 1 11.1860021 -8.2573831 24.92466798 1.027166978 0.842102135 0.566595699 0.064134763 243.7327851 1497693.118 0.05261427 0.018242363 5.53E-09 8.2573831 -0.185064843 S(ph)SPSILAVQR ddPTM_A459_MK2206_30min_R2 2 SSPSILAVQR 10 0 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(0.5)S(0.5)PSILAVQR;S(0.928)S(0.072)PSILAVQR 169.21 0.00024231 15123300 88117 82573 85118 82970 83385 85333 97682 77702 74504 90598 TRUE FALSE 94863.30527 78472.54489 87955.79164 76191.08559 80110.88592 88580.40711 84856.23606 87857.91819 80984.22325 87641.79468 1.082398023 0.895378115 1.003582731 0.869346479 0.914071719 1.010709644 0.96821655 1.002465987 0.924036569 1 16.41933141 -6.76528106 24.98720091 0.980435543 0.947924364 0.048385001 0.060313676 309.1252948 2010604.219 0.020246081 0.018544206 1.72E-07 6.76528106 -0.032511178 S(ph)SPSKCPSLDDR ddPTM_A459_MK2206_30min_R1 2 SSPSKCPSLDDR 12 1 P38398-8;P38398-4;P38398;P38398-7;H0Y8B8;B7ZA85;E7EUM2;A0A2R8Y7V5;P38398-6;P38398-5;P38398-3 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 S(0.486)S(0.486)PS(0.027)KCPSLDDR;S(0.628)S(0.285)PS(0.005)KCPS(0.082)LDDR 166.62 0.0021975 18252100 5023.6 5024.3 5725.7 4471.1 4604.3 4328.8 4870.3 4538.6 3885.9 3251.6 TRUE FALSE 4596.31644 4697.217157 5337.055437 4815.464897 4420.900981 4573.892915 4545.411173 4498.919499 4289.853211 3654.432756 1.257737314 1.285347815 1.46043334 1.317705159 1.209736579 1.251601335 1.243807583 1.231085588 1.173876631 1 11.83543177 -8.916985707 0.328586663 0.954484449 1.340554575 0.711855325 0.058807063 1.579727603 0.375796602 0.192210438 0.072765086 1.21E-09 8.916985707 0.386070127 S(ph)SPSPALEQPFR ddPTM_A459_MK2206_30min_R2 1 SSPSPALEQPFR 12 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.911)S(0.088)PS(0.001)PALEQPFR 134.75 0.001555 12335000 6568.3 9547.2 7020.8 8855.4 8162.3 9946.4 9496 7764.8 8260.2 10268 TRUE FALSE 7071.174098 9073.099931 7254.869968 8131.885493 7841.80709 10324.91722 8249.163793 8779.686021 8978.657265 9932.956001 0.711890206 0.91343402 0.730383782 0.818677289 0.789473656 1.039460682 0.830484278 0.883894585 0.903926008 1 13.27800741 -6.700590702 24.99999078 0.917980899 0.797448024 0.455687722 0.075022925 72.07512746 29611.89112 0.023574934 0.023574925 1.99E-07 6.700590702 -0.120532875 S(ph)SPSVLIHSLGK ddPTM_A459_MK2206_30min_R1 1 SSPSVLIHSLGK 12 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 S(0.497)S(0.497)PS(0.005)VLIHSLGK 68.168 0.046366 16719000 6366.8 3785.9 4445.8 3354.3 6856.4 6794.8 7934.8 5164.1 4987 4383.4 TRUE FALSE 5825.270227 3539.437222 4144.031483 3612.648767 6583.295069 7179.515704 7405.48397 5118.950818 5505.416496 4926.448685 1.182448169 0.718456123 0.84118028 0.73331704 1.336316582 1.45734101 1.5032094 1.039075234 1.117522347 1 12.26633231 -6.266080259 24.91072808 1.268000979 0.856131512 0.462525662 0.195821108 324.2925018 1740694.005 0.062242587 0.072934472 5.42E-07 6.266080259 -0.411869467 S(ph)SPTQETQAPFIAK ddPTM_A459_MK2206_30min_R1 1 SSPTQETQAPFIAK 14 0 O15231-5 O15231-5 ZNF185 Zinc finger protein 185 1 S(0.899)S(0.101)PTQETQAPFIAK 168.93 0.00018714 7619700 2653.7 2271.1 2519.4 2205.3 2340 2230.6 2506.5 2105.1 2137.1 1939.2 TRUE FALSE 2427.98888 2123.250977 2348.390147 2375.152588 2246.792845 2356.894644 2339.295958 2086.695333 2359.259193 2179.442736 1.114041144 0.974217373 1.077518628 1.089798116 1.030902445 1.081420771 1.073345915 0.957444441 1.082505704 1 11.08974358 S(ph)SPTSASACGAQGLR ddPTM_A459_MK2206_30min_R2 2 SSPTSASACGAQGLR 15 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8 Q8IVL0-3 NAV3 Neuron navigator 3 1 S(0.967)S(0.033)PTSASACGAQGLR;S(0.517)S(0.095)PT(0.358)S(0.03)ASACGAQGLR 218.55 2.79E-09 19107600 42743 39149 41989 40356 36920 38762 52383 33562 33423 46645 TRUE FALSE 46015.43694 37204.91759 43388.8923 37058.78571 35470.33529 40237.11507 45505.04918 37948.66864 36330.07213 45122.97747 1.019778382 0.824522664 0.961569797 0.821284139 0.786081444 0.891721188 1.008467343 0.84100542 0.805134638 1 15.46157465 -10.55562043 4.018044789 1.00001474 0.882745501 0.15556764 0.08071855 113960799.5 216580334 23375.7788 0.020109515 2.78E-11 10.55562043 -0.117269239 S(ph)SPVCSTAPVETEPK ddPTM_A459_MK2206_30min_R1 2 SSPVCSTAPVETEPK 15 0 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 S(0.754)S(0.246)PVCSTAPVETEPK;S(0.5)S(0.5)PVCSTAPVETEPK 209.53 1.38E-06 17027300 5514.4 6329.4 6375.8 5081.6 4578.8 4847.8 5978.5 5248.4 7026.5 8173.4 TRUE FALSE 5045.371323 5917.35491 5943.02846 5472.985712 4396.4167 5122.278247 5579.685173 5202.513792 7756.92982 9185.982498 0.549246782 0.644172239 0.6469671 0.595797533 0.478600596 0.557618986 0.607412999 0.566353549 0.844431156 1 13.16521832 -8.428228536 2.867754712 0.997704969 0.58129197 0.896569298 0.047718128 0.075897689 1.24452767 0.049975695 0.013484756 3.73E-09 8.428228536 -0.416412999 S(ph)SPVCSTAPVETEPK ddPTM_A459_MK2206_30min_R2 2 SSPVCSTAPVETEPK 15 0 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 S(0.5)S(0.5)PVCSTAPVETEPK;S(0.942)S(0.058)PVCSTAPVETEPK 330.04 4.98E-127 33837000 136828 105124 112000 101783 92450 72480 117892 96646 77498 106694 TRUE FALSE 147303.6569 99903.69502 115734.0241 93467.00331 88819.94848 75238.27719 102412.6388 109277.964 84238.63596 103212.5835 1.427186995 0.967941036 1.121316996 0.905577597 0.860553485 0.728964189 0.992249543 1.058765902 0.816166334 1 16.65525935 -1.890123488 0.989295922 0.915425924 200 0.641093264 0.109797226 446.8079246 1.473172594 0.036023867 200448.2491 0.012878833 1.890123488 199.0845741 S(ph)SPVEFECINEK ddPTM_A459_MK2206_30min_R1 1 SSPVEFECINEK 12 0 O75131;H0YB26 O75131 CPNE3 Copine-3 1 S(0.938)S(0.062)PVEFECINEK 246.63 3.41E-18 13411000 2084.5 2194.8 2295 1926.8 2113.5 1935.1 2039.1 2027.5 2181 2203 TRUE FALSE 1907.202329 2051.918121 2139.221794 2075.20247 2029.31482 2044.66369 1903.07536 2009.773781 2407.722755 2475.924272 0.770299137 0.828748336 0.86400938 0.838152642 0.819619098 0.825818347 0.768632297 0.811726677 0.972454118 1 11.27375147 -8.298319757 4.819209586 0.993900403 0.817252128 0.85903896 0.027648044 0.074961784 4.230466739 0.027093966 0.007495547 5.03E-09 8.298319757 -0.176648275 S(ph)SPVEFECINEK ddPTM_A459_MK2206_30min_R2 2 SSPVEFECINEK 12 0 O75131;H0YB26 O75131 CPNE3 Copine-3 1 S(0.994)S(0.006)PVEFECINEK;S(0.5)S(0.5)PVEFECINEK 196.7 0.00015367 28546000 76432 79708 82559 88402 88149 71661 93922 74920 66450 85913 TRUE FALSE 82283.69269 75749.81663 85311.47585 81179.27382 84687.82735 74388.10957 81589.92858 84712.30124 72229.70089 83109.66585 0.990061647 0.911444125 1.026492827 0.976772954 1.018988904 0.895059664 0.981714073 1.019283382 0.869089054 1 16.34272866 S(ph)SPVESLK ddPTM_A459_MK2206_30min_R2 2 SSPVESLK 8 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2;B1AKL5 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.923)S(0.077)PVESLK;S(0.993)S(0.007)PVESLK 128.6 0.0042872 20720000 322880 211180 227370 226365 180544 145033 270150 204540 165658 275860 TRUE FALSE 347599.9411 200693.1083 234950.4023 207870.2554 173454.9354 150552.3324 234678.9805 231274.0803 180066.6334 266858.7108 1.302561719 0.75205755 0.880429953 0.778952483 0.649987909 0.564164955 0.879412854 0.866653667 0.674763934 1 18.02571658 -4.760015111 24.98877699 0.773714713 1.302562366 0.614592685 0.123251811 24.1017587 422714.8172 0.030914622 0.188670896 1.74E-05 4.760015111 0.528847653 S(ph)SPVESLKK ddPTM_A459_MK2206_30min_R1 1 SSPVESLKK 9 1 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2;B1AKL5 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.917)S(0.083)PVESLKK 131.09 0.0066217 74163000 5139.7 5439.2 5560.9 4367 4767.6 4306.6 5474.7 4849.4 5348.5 5073.3 TRUE FALSE 4702.541525 5085.107091 5183.441602 4703.347097 4577.696396 4550.43597 5109.492752 4807.002207 5904.495715 5701.818705 0.824744133 0.891839491 0.909085657 0.824885416 0.802848465 0.79806746 0.896116312 0.843064723 1.035546028 1 12.47720645 -8.259157739 24.99486259 1.01777303 0.849826589 0.762338053 0.03772809 95.24995289 1043472.363 0.030733407 0.010338405 5.51E-09 8.259157739 -0.167946441 S(ph)SPVLQHK ddPTM_A459_MK2206_30min_R1 2 SSPVLQHK 8 0 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;H0Y470;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.5)S(0.5)PVLQHK;S(0.5)S(0.5)PVLQHK 117.31 0.0059018 22591000 16193.1 13226.1 12311.4 15245.2 8360 10694.2 19192.5 24686 517.44 10884.8 TRUE FALSE 14815.79181 12365.07849 11475.73647 16419.38795 8027.003497 11299.69636 17912.20334 24470.1729 571.2297397 12233.2912 1.211104319 1.01077284 0.938074332 1.342188923 0.656160584 0.923684083 1.46421785 2.000293503 0.04669469 1 13.57852497 -7.219937198 24.85787659 1.211159865 1.008779632 0.001398643 0.487444324 1871.283326 1120812.612 0.181254853 0.140397965 6.03E-08 7.219937198 -0.202380233 S(ph)SPVLQHK ddPTM_A459_MK2206_30min_R2 4 SSPVLQHK 8 0 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;H0Y470;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.5)S(0.5)PVLQHK;S(0.5)S(0.5)PVLQHK;S(0.5)S(0.5)PVLQHK;S(0.5)S(0.5)PVLQHK 133.75 0.0019719 168090000 322776 352285 363505 374232 417321 316365 432803 512780 508030 471807 TRUE FALSE 347487.9787 334791.0392 375624.0753 343656.0485 400934.8807 328404.4918 375975.4462 579802.1066 552217.5311 456411.9762 0.761347197 0.733528164 0.822993468 0.752951426 0.878449518 0.71953522 0.823763323 1.270348143 1.209910256 1 18.79997712 -7.710477324 6.82645272 1.179545128 0.78226674 0.82841284 0.078207722 0.06789046 7.021253263 0.035603943 0.02011394 1.95E-08 7.710477324 -0.397278388 S(ph)SPVPPVPER ddPTM_A459_MK2206_30min_R1 4 SSPVPPVPER 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 S(0.926)S(0.074)PVPPVPER;S(0.908)S(0.092)PVPPVPER;S(0.5)S(0.5)PVPPVPER;S(0.637)S(0.363)PVPPVPER 157.97 0.00048319 105173000 14864 14554.9 14174.8 10836.1 15060 15204.7 17222.1 14379.1 15549.1 16115.2 TRUE FALSE 13599.73875 13607.37336 13212.65407 11670.6983 14460.12831 16065.57697 16073.24513 14253.38504 17165.48459 18111.67264 0.750882539 0.75130407 0.729510429 0.644374406 0.798387239 0.887028895 0.887452277 0.78697232 0.947758108 1 14.14463217 -6.580489695 3.690011866 0.887202744 0.721440319 0.67913633 0.058819363 0.145851449 4.076700026 0.01971232 0.020114142 2.63E-07 6.580489695 -0.165762425 S(ph)SPVPPVPER ddPTM_A459_MK2206_30min_R2 4 SSPVPPVPER 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 S(0.991)S(0.009)PVPPVPER;S(0.909)S(0.091)PVPPVPER;S(0.914)S(0.086)PVPPVPER;S(0.958)S(0.042)PVPPVPER 128.51 0.0031049 143917000 322881 339434 334566 405008 387626 394701 363634 304698 356953 373637 TRUE FALSE 347601.0176 322578.2011 345720.2635 371917.5508 372405.8556 409721.6231 315888.419 344523.0748 388000.1267 361445.2553 0.961697553 0.89246766 0.956494126 1.028973393 1.030324372 1.133564813 0.873959236 0.953181899 1.073468585 1 18.46341763 -5.593051593 4.663284462 1.010999942 0.926223659 0.22349132 0.066574671 0.314397922 13.05637456 0.01907145 0.034502488 2.55E-06 5.593051593 -0.084776283 S(ph)SPVPPVPERR ddPTM_A459_MK2206_30min_R1 1 SSPVPPVPERR 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 S(0.5)S(0.5)PVPPVPERR 98.942 0.0091114 50788000 1475.3 1573.4 1533 1556.8 1844.8 1586.1 1563.7 1325.1 865.53 1109.8 TRUE FALSE 1349.817988 1470.971374 1428.944231 1676.705006 1771.31771 1675.903611 1459.388426 1313.51479 955.5049408 1247.290403 1.082200252 1.179333514 1.145638761 1.344277966 1.420132558 1.343635458 1.170047026 1.053094602 0.766064534 1 10.28458169 -7.871950731 2.528513733 0.886808736 1.254216262 0.626433794 0.111597857 0.197349691 2.466424278 0.085279803 0.033818298 1.34E-08 7.871950731 0.367407526 S(ph)SPVPVSDTQK ddPTM_A459_MK2206_30min_R2 2 SSPVPVSDTQK 11 0 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 1 S(0.932)S(0.068)PVPVSDTQK;S(0.994)S(0.006)PVPVSDTQK 190.36 1.98E-05 15582900 91048 73584 62974 69532 66331 59476 90440 67573 55145 90243 TRUE FALSE 98018.70488 69929.92556 65073.52173 63851.01318 63726.51165 61739.40086 78565.11936 76405.02311 59941.41242 87298.3783 1.122800982 0.801044956 0.745415012 0.731411218 0.729985057 0.707222769 0.899960811 0.875216981 0.686626872 1 16.41366723 -4.762030218 5.971478386 0.787298762 1.135299287 0.511264982 0.095066074 0.105149076 14.3036956 0.023113699 0.150046691 1.73E-05 4.762030218 0.348000525 S(ph)SPVTVNQTDK ddPTM_A459_MK2206_30min_R2 1 SSPVTVNQTDK 11 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8 Q8IVL0-3 NAV3 Neuron navigator 3 1 S(0.813)S(0.187)PVTVNQTDK 110.98 0.0085117 5160400 27707 27774 23383 26893 21768 20311 27428 24826 18877 24328 TRUE FALSE 29828.26922 26394.78355 24162.57755 24695.75587 20913.27894 21083.94934 23826.67065 28070.84344 20518.88734 23534.17935 1.267444629 1.121551049 1.026701513 1.049357001 0.888634298 0.89588632 1.012428362 1.192769164 0.87187605 1 14.52246993 -4.764324973 1.236233925 0.988176476 1.403870461 0.50108825 0.08815146 1.365581127 1.739968673 0.027818142 0.738803734 1.72E-05 4.764324973 0.415693984 S(ph)SPVTVNQTDKEK ddPTM_A459_MK2206_30min_R1 1 SSPVTVNQTDKEK 13 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8 Q8IVL0-3 NAV3 Neuron navigator 3 1 S(0.5)S(0.5)PVTVNQTDKEK 102.63 0.0050295 8190500 3129.6 3416.5 4644.5 3846 3023.5 2880 3174.3 3368.2 3372.1 3308.5 TRUE FALSE 2863.411086 3194.085229 4329.24428 4142.219586 2903.067593 3043.063111 2962.548239 3338.752183 3722.641862 3718.381958 0.77006911 0.85899869 1.164281757 1.113984425 0.7807341 0.81838368 0.796730479 0.897904578 1.001145634 1 11.86045926 -6.275589457 24.87618334 0.869885715 0.981805897 0.111679814 0.127113653 1591.855992 2798515.265 0.042729967 0.048682637 5.30E-07 6.275589457 0.111920182 S(ph)SPVVNDGVVR ddPTM_A459_MK2206_30min_R1 1 SSPVVNDGVVR 11 0 H0YAM1;H0Y8R1;F5H5I6;H0YAK1;Q12849-5;Q12849 H0YAM1 GRSF1 G-rich sequence factor 1 1 S(0.5)S(0.5)PVVNDGVVR 130.69 0.0023466 5396100 2467.5 2598.5 2178.7 1992.5 2662.9 2108.4 2287.7 2013.6 1796.9 1833.9 TRUE FALSE 2257.626168 2429.337178 2030.815914 2145.962695 2556.831054 2227.775786 2135.091707 1995.995307 1983.694185 2061.097377 1.095351531 1.17866201 0.985308087 1.041174822 1.24051929 1.08086877 1.035900453 0.96841388 0.96244564 1 11.00919695 -7.460189149 2.572673293 0.974766695 1.105227489 0.428148727 0.066080315 0.29587077 3.85624264 0.036047449 0.020720224 3.47E-08 7.460189149 0.130460793 S(ph)SPYGR ddPTM_A459_MK2206_30min_R2 3 SSPYGR 6 0 P79522-2;P79522 P79522-2 PRR3 Proline-rich protein 3 1 S(0.999)S(0.001)PYGR;S(0.999)S(0.001)PYGR;S(0.999)S(0.001)PYGR 99.375 0.033329 2426893000 40341 28811.7 33686.7 30850.6 39878.2 26222.2 38920.6 104137.7 56266.8 49676.9 TRUE FALSE 43429.53798 27380.95287 34809.79776 28330.00729 38312.3815 27220.1042 33810.27847 117748.8549 61160.78456 48055.94682 0.903728692 0.569772415 0.724359836 0.589521363 0.797245378 0.566425302 0.70356076 2.45024524 1.272699605 1 15.55242735 -7.669445083 12.27361788 1.645612144 0.683875155 0.553422166 0.360834368 0.322431086 40.97765069 0.155707503 0.089850108 2.14E-08 7.669445083 -0.961736989 S(ph)SPYGTLKPEEMSGPGLAEPK ddPTM_A459_MK2206_30min_R2 1 SSPYGTLKPEEMSGPGLAEPK 21 1 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065;Q5JSZ5-5 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B 1 S(0.418)S(0.331)PY(0.247)GT(0.004)LKPEEMSGPGLAEPK 106.02 7.83E-05 6005700 38813 34137 33412 33131 30145 21970 40093 33685 31977 42318 TRUE FALSE 41784.55312 32441.80622 34525.9394 30424.09132 28961.35583 22806.08375 34828.74094 38087.74516 34758.30166 40937.16713 1.020699674 0.792478046 0.843388584 0.743189953 0.707458719 0.557099705 0.850785323 0.930395233 0.849064654 1 15.32112365 -7.517998975 24.41287388 0.911956083 0.77030602 0.251976654 0.114332281 248.6856598 1244170.435 0.055094963 0.03294982 3.03E-08 7.517998975 -0.141650062 S(ph)SQPSPTAVPASDS(ph)PPTK ddPTM_A459_MK2206_30min_R1 1 SSQPSPTAVPASDSPPTK 18 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 S(0.897)S(0.063)QPS(0.028)PT(0.012)AVPASDS(0.747)PPT(0.253)K 191.9 4.47E-09 5604700 3752.7 3672.5 3423.1 2551.2 2709.3 3130.3 3547.9 2600.5 4377.3 4470.1 TRUE FALSE 3433.513159 3433.419582 3190.749509 2747.693866 2601.382844 3307.534881 3311.226065 2577.764103 4832.335999 5023.889736 0.683437205 0.683418579 0.635115354 0.546925592 0.517802536 0.65836136 0.659096087 0.51310125 0.961871429 1 12.29458908 -8.273524288 24.12742205 0.980935922 0.613083116 0.848906026 0.062231814 198.430273 396157.9793 0.0615613 0.016432299 5.33E-09 8.273524288 -0.367852805 S(ph)SRGQEEISGALPVASPASSR ddPTM_A459_MK2206_30min_R1 3 SSRGQEEISGALPVASPASSR 21 1 H0Y9D5;H0Y8S9;Q9UBK8;Q9UBK8-1 H0Y9D5 MTRR Methionine synthase reductase 1 S(0.5)S(0.5)RGQEEISGALPVASPASSR;S(0.5)S(0.5)RGQEEISGALPVASPASSR;S(0.499)S(0.499)RGQEEIS(0.001)GALPVASPASSR 176.44 2.25E-13 12193000 3546.48 3656.25 3783.9 3613.56 4651.83 4087.8 3897.2 2988.9 2751.77 2398.72 TRUE FALSE 3244.833253 3418.22746 3527.059411 3891.877017 4466.537761 4319.247703 3637.224899 2962.768362 3037.826339 2695.891543 1.203621585 1.267939532 1.30830909 1.443632637 1.656794307 1.602159299 1.349173303 1.098993901 1.126835516 1 11.39654674 -7.721867659 3.946340799 1.078126545 1.418824092 0.560125713 0.134636663 0.18950956 6.206869873 0.083737288 0.042945125 1.90E-08 7.721867659 0.340697546 S(ph)SRGQEEISGALPVASPASSR ddPTM_A459_MK2206_30min_R2 2 SSRGQEEISGALPVASPASSR 21 1 H0Y9D5;H0Y8S9;Q9UBK8;Q9UBK8-1 H0Y9D5 MTRR Methionine synthase reductase 1 S(0.473)S(0.473)RGQEEIS(0.053)GALPVASPASSR;S(0.499)S(0.499)RGQEEIS(0.001)GALPVASPASSR 174.2 2.37E-10 19789000 34054 60265 44629 63135 65919 57815 62379 50347 62682 43986 TRUE FALSE 36661.20042 57272.32773 46116.90859 57976.66854 63330.68884 60015.19034 54188.56237 56927.52577 68133.96706 42550.74042 0.861587837 1.34597723 1.083809779 1.362530193 1.488356917 1.410438214 1.27350457 1.337873917 1.601240457 1 15.37689662 -4.206627137 1.023777358 1.358272108 1.49E-19 0.370929845 0.171951647 5.517088553 2.056958331 0.052454151 10.90022956 6.21E-05 4.206627137 -1.358272108 S(ph)SSASSPEMK ddPTM_A459_MK2206_30min_R2 2 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.523)S(0.037)S(0.44)ASSPEMK;S(0.458)S(0.458)S(0.083)ASSPEMK 175.33 5.67E-05 108409000 307850 350460 325260 301500 299580 238800 311300 270680 280370 277780 TRUE FALSE 331419.2327 333056.666 336104.0061 276866.4855 287816.9839 247887.7013 270425.9361 306058.8054 304756.0758 268716.0613 1.233343593 1.239437138 1.25077751 1.03033099 1.071082177 0.922489337 1.006363128 1.138967294 1.134119316 1 18.03572303 -5.760803715 24.99945127 1.043706596 1.241011227 0.693487771 0.060276426 10.31812282 405753.0176 0.018389664 0.029572252 1.73E-06 5.760803715 0.19730463 S(ph)SSDPGIPGGPQAIPATNSPDHSDHTLSVSSDSGHSTASAR ddPTM_A459_MK2206_30min_R2 1 SSSDPGIPGGPQAIPATNSPDHSDHTLSVSSDSGHSTASAR 41 0 Q68CZ2;E9PCX8;C9JHU5 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 S(0.33)S(0.33)S(0.33)DPGIPGGPQAIPAT(0.005)NS(0.005)PDHSDHTLSVSSDSGHSTASAR 67.622 8.49E-08 8385700 5081.1 32029 15730 76077 75733 156040 54033 27494 72745 43984 TRUE FALSE 5470.112923 30438.48643 16254.43035 69861.26574 72759.34189 161978.2115 46938.40219 31087.5602 79072.22861 42548.80568 0.128560904 0.715378163 0.382018487 1.641908971 1.71002078 3.806880333 1.103166151 0.730632968 1.85838891 1 15.37683102 -5.784272571 5.819790243 1.752610586 0.433598342 0.348058721 0.802989408 0.197681133 20.48993047 0.239844549 0.375826496 1.64E-06 5.784272571 -1.319012244 S(ph)SSDPPAVHPPLPPLR ddPTM_A459_MK2206_30min_R1 1 SSSDPPAVHPPLPPLR 16 0 O43150 O43150 ASAP2 "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2" 1 S(0.458)S(0.084)S(0.458)DPPAVHPPLPPLR 92.236 0.0072442 2730300 1529.7 1626.4 1624 1390.4 1959.4 1736.1 1864.8 1791.1 1583 1470.1 TRUE FALSE 1399.590982 1520.521064 1513.767405 1497.488849 1881.352949 1834.396482 1740.402595 1775.440602 1747.558515 1652.227087 0.847093595 0.920285763 0.916198153 0.90634566 1.13867698 1.110256875 1.053367669 1.074574201 1.057698744 1 10.69019627 -6.247112777 24.3964971 1.077096105 0.900446647 0.827254954 0.039120782 227.556194 387500.7818 0.01154464 0.014829586 5.66E-07 6.247112777 -0.176649458 S(ph)SSDPPAVHPPLPPLR ddPTM_A459_MK2206_30min_R2 2 SSSDPPAVHPPLPPLR 16 0 O43150 O43150 ASAP2 "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2" 1 S(0.462)S(0.075)S(0.462)DPPAVHPPLPPLR;S(0.46)S(0.081)S(0.46)DPPAVHPPLPPLR 105 0.0024768 15946300 41999 60233 55330 63199 69115 72898 81958 64990 76200 79552 TRUE FALSE 45214.47573 57241.91681 57174.67458 58035.43954 66401.19782 75672.18447 71196.81615 73484.41614 82827.73826 76956.22476 0.587535003 0.743824388 0.742950616 0.75413574 0.862843754 0.983314666 0.925159938 0.954885929 1.076296798 1 16.23175041 -5.992442746 0.502899516 1.029522391 0.571122086 0.897136592 0.046187939 0.474106634 0.207223581 0.036879511 0.113449494 1.02E-06 5.992442746 -0.458400305 S(ph)SSEAKPTSLGLAGGHK ddPTM_A459_MK2206_30min_R2 2 SSSEAKPTSLGLAGGHK 17 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 S(0.435)S(0.13)S(0.435)EAKPTSLGLAGGHK;S(0.986)S(0.013)S(0.001)EAKPTSLGLAGGHK 129.89 0.00049656 34310000 115127 142573 133968 150614 118537 102119 126976 91450 86684 103243 TRUE FALSE 123941.2116 135493.0321 138434.4263 138308.3544 113882.6418 106005.2101 110303.8987 103402.829 94223.61763 99874.18937 1.240973393 1.356637115 1.386088109 1.384825802 1.140260987 1.061387439 1.104428475 1.035330846 0.943423103 1 16.60782427 -6.45590607 2.784302405 1.035856941 1.346671878 0.875378322 0.055576604 0.096774376 1.477475148 0.020106881 0.022375708 3.50E-07 6.45590607 0.310814937 S(ph)SSEALFK ddPTM_A459_MK2206_30min_R2 2 SSSEALFK 8 0 P42568-2;P42568 P42568-2 MLLT3 Protein AF-9 1 S(0.976)S(0.021)S(0.003)EALFK;S(0.988)S(0.012)SEALFK 106.2 0.013829 6741500 57924 63435 55981 48511 35789 30780 33197 25798.8 26839 24748 TRUE FALSE 62358.70598 60284.91014 57847.3786 44547.49612 34383.74403 31951.35447 28838.19402 29170.79174 29173.40771 23940.47479 2.604739736 2.518116732 2.416300391 1.860760763 1.436218134 1.334616575 1.204579035 1.21847173 1.218581 1 14.54716414 -6.006294574 1.191186304 1.185241886 2.629130986 0.984753223 0.072268204 0.050281432 0.145147028 0.026462488 0.051123671 9.86E-07 6.006294574 1.4438891 up S(ph)SSEDAESLAPR ddPTM_A459_MK2206_30min_R1 1 SSSEDAESLAPR 12 0 Q4G0J3;Q4G0J3-3;H0YA82 Q4G0J3 LARP7 La-related protein 7 1 S(0.825)S(0.019)S(0.155)EDAESLAPR 121.21 0.0028026 0 999.75 969.14 976.37 1014.7 1192.1 1099.8 1640.3 1116.6 1189.7 948.94 TRUE FALSE 914.7160126 906.0488099 910.0967247 1092.85237 1144.616133 1162.069726 1530.87858 1106.837684 1313.373572 1066.501851 0.857678786 0.849552027 0.853347534 1.024707429 1.073243456 1.089608728 1.435420462 1.037820687 1.231478005 1 10.05867075 -6.111170319 1.313758089 1.176684534 0.840859863 0.566494814 0.11451379 0.305584951 1.069241139 0.042105119 0.069292977 7.74E-07 6.111170319 -0.335824671 S(ph)SSEITLSECDAEDAGEPR ddPTM_A459_MK2206_30min_R1 1 SSSEITLSECDAEDAGEPR 19 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 S(0.481)S(0.037)S(0.481)EITLSECDAEDAGEPR 327.7 1.82E-154 85584000 2463.6 2370.7 2250 2094.1 2492.8 2020.4 2066.5 1939 1931.8 2116.3 TRUE FALSE 2254.057883 2216.366999 2097.276269 2255.387945 2393.506497 2134.793302 1928.647556 1922.047527 2132.617523 2378.483221 0.947687107 0.931840502 0.88177047 0.948246313 1.006316326 0.897543982 0.810872887 0.808097997 0.896629206 1 11.21582613 -6.996785835 24.84274913 0.861665362 0.940664994 0.19579655 0.058113338 115.665695 893985.9625 0.020245721 0.017762544 1.01E-07 6.996785835 0.078999632 S(ph)SSERSTPPYLFPEYPEASK ddPTM_A459_MK2206_30min_R2 1 SSSERSTPPYLFPEYPEASK 20 1 Q8TE76-2;Q8TE76-3;Q8TE76 Q8TE76-2 MORC4 MORC family CW-type zinc finger protein 4 1 S(0.23)S(0.23)S(0.23)ERS(0.154)T(0.154)PPY(0.002)LFPEYPEASK 54.263 0.026488 5372200 22966 56434 41433 54456 57801 51760 56650 36160 50789 37950 TRUE FALSE 24724.29462 53631.56962 42814.35554 50006.7706 55531.44231 53729.76307 49211.78695 40886.23616 55206.53541 36711.69461 0.673471897 1.460885154 1.166232068 1.362148251 1.512636311 1.463559872 1.340493472 1.113711491 1.503786082 1 15.16395209 -4.7547647 24.99998346 1.335285622 0.673470779 0.573775194 0.168200681 159.519497 597425.5452 0.040182969 0.379900574 1.76E-05 4.7547647 -0.661814843 S(ph)SSESLIFSGNQGR ddPTM_A459_MK2206_30min_R1 2 SSSESLIFSGNQGR 14 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 S(0.499)S(0.499)S(0.002)ESLIFSGNQGR;S(0.467)S(0.445)S(0.087)ESLIFSGNQGR 223.58 3.39E-09 41482000 4421.7 5738.5 4444.8 4107.2 4168.4 4841 5162.4 4690.8 4496.8 4388.8 TRUE FALSE 4045.611196 5364.922607 4143.09936 4423.537256 4002.363801 5115.093236 4818.025715 4649.78883 4964.258452 4932.517678 0.82019193 1.087664142 0.839956312 0.896811232 0.811424117 1.037014679 0.976788332 0.942680622 1.006435005 1 12.26810851 -6.777970667 24.99943746 0.988014045 0.899587469 0.302905557 0.076208969 360.3378586 544917.3065 0.026600422 0.023523959 1.67E-07 6.777970667 -0.088426577 S(ph)SSESLIFSGNQGR ddPTM_A459_MK2206_30min_R2 4 SSSESLIFSGNQGR 14 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 S(0.893)S(0.106)S(0.001)ESLIFSGNQGR;S(0.903)S(0.096)SESLIFSGNQGR;S(0.918)S(0.082)SESLIFSGNQGR;S(0.887)S(0.098)S(0.015)ESLIFSGNQGR 217.19 1.22E-08 49638300 73482 100462 101162 124375 114273 102424 137215 98429 132042 106891 TRUE FALSE 79107.83842 95473.20317 104534.6906 114213.1646 109786.0678 106321.8171 119198.5057 111294.0083 143526.7745 103403.1554 0.765042789 0.923310346 1.010942946 1.104542353 1.06172841 1.028226041 1.152755012 1.076311528 1.388030896 1 16.65792069 -3.887229557 0.525613797 1.143119778 3.70E-16 0.573563426 0.099114489 7.259772647 0.75363958 0.053144554 6.252195063 0.000129649 3.887229557 -1.143119778 S(ph)SSFSLPSR ddPTM_A459_MK2206_30min_R2 1 SSSFSLPSR 9 0 Q14153-2;Q14153 Q14153-2 FAM53B Protein FAM53B 1 S(0.462)S(0.023)S(0.414)FS(0.101)LPSR 114.4 0.008557 8329900 37556 49190 44078 53399 44870 39975 51712 44443 42956 48870 TRUE FALSE 40431.31624 46747.29613 45547.53852 49036.13089 43108.17835 41496.27664 44922.15228 50251.8527 46692.23523 47275.3759 0.855229926 0.988829708 0.963451642 1.037244653 0.911852683 0.877756672 0.950223059 1.062960405 0.987665023 1 15.52880131 -7.663393426 8.072563013 1.018686816 0.943153318 0.305974927 0.052561107 0.315747843 22.8501503 0.025766681 0.01479239 2.17E-08 7.663393426 -0.075533498 S(ph)SSLDGEHHDGYHR ddPTM_A459_MK2206_30min_R2 2 SSSLDGEHHDGYHR 14 0 Q9C0J8 Q9C0J8 WDR33 pre-mRNA 3 end processing protein WDR33 1 S(0.444)S(0.444)S(0.112)LDGEHHDGYHR;S(0.455)S(0.455)S(0.089)LDGEHHDGYHR 80.387 0.017764 19259400 22556.3 20213.8 35061 33754.6 26409.9 24549.3 32915.7 24599.4 18952.3 26459.7 TRUE FALSE 24283.22767 19210.01209 36229.91624 30996.7412 25372.91463 25483.54081 28593.82905 27814.62604 20600.7368 25596.32216 0.948699877 0.750498918 1.415434453 1.21098418 0.991271889 0.995593846 1.117106937 1.086664946 0.804831908 1 14.64364891 -8.242904028 24.23432437 0.902415945 1.067655189 0.126772877 0.170032785 1039.040467 1358515.566 0.120798109 0.045450652 5.72E-09 8.242904028 0.165239244 S(ph)SSLESLQTAVAEVTLNGDIPFHRPR ddPTM_A459_MK2206_30min_R1 1 SSSLESLQTAVAEVTLNGDIPFHRPR 26 1 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.333)S(0.333)S(0.333)LES(0.001)LQTAVAEVTLNGDIPFHRPR 143.21 4.00E-10 5831300 320.35 295.55 214.07 193.05 308.77 351.32 454.23 146.12 290.64 435.52 TRUE FALSE 293.1025503 276.3096413 199.5395248 207.9187444 296.4710371 371.2114348 423.9291455 144.8424882 320.8530681 489.4755056 0.598809434 0.564501468 0.407659878 0.42477865 0.605691263 0.758386131 0.86608858 0.29591366 0.655503829 1 8.935092856 -6.495087848 6.171209352 0.681119091 0.498439313 0.235384791 0.17862319 0.328808421 42.15602957 0.058099887 0.063631006 3.20E-07 6.495087848 -0.182679778 S(ph)SSLGNLK ddPTM_A459_MK2206_30min_R2 1 SSSLGNLK 8 0 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6;H0YGH8 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.664)S(0.063)S(0.273)LGNLK 112.3 0.011233 25510000 112720 96698 103130 113780 89116 93081 127470 99723 82608 115810 TRUE FALSE 121349.9299 91896.11793 106568.3027 104483.81 85616.85807 96623.26268 110733.0359 112757.1385 89793.09452 112031.1292 1.083180458 0.820273067 0.951238317 0.932631946 0.764223825 0.862467989 0.988413102 1.006480425 0.80150129 1 16.77354013 -9.836219832 12.71916798 1.000017124 0.910498821 0.07048851 0.095381401 0 0 0.090787573 0.022019221 1.46E-10 9.836219832 -0.089518302 S(ph)SSLIQLTSQNSSPNQQR ddPTM_A459_MK2206_30min_R2 1 SSSLIQLTSQNSSPNQQR 18 0 H7C419;O95639 H7C419 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 1 S(0.855)S(0.012)S(0.134)LIQLTSQNSSPNQQR 286.85 1.43E-80 9482900 12446 15110 14738 14607 15894 15299 16232 13961 14182 17765 TRUE FALSE 13398.87533 14359.65937 15229.35756 13413.56137 15269.9217 15881.21417 14100.7189 15785.75064 15415.52472 17185.3295 0.779669388 0.83557661 0.886183623 0.780523956 0.888544016 0.924114615 0.82050908 0.918559672 0.897016535 1 14.06888989 -14.52287871 0.041768633 1.674380879 0.48297701 0.615417869 0.040773317 530.9362187 1.647662067 43.45337257 12.35195134 3.00E-15 14.52287871 -1.191403869 S(ph)SSLSDLTHR ddPTM_A459_MK2206_30min_R1 1 SSSLSDLTHR 10 0 Q5T9C2-3;Q5T9C2-2;Q5T9C2 Q5T9C2-3 FAM102A Protein FAM102A 1 S(0.47)S(0.47)S(0.059)LSDLTHR 134.98 0.0013332 2650300 1842.7 896.52 978.79 898.28 2188.8 1743.8 2137.6 1484.7 1093.4 1007.6 TRUE FALSE 1685.968689 838.1563851 912.3524619 967.4656812 2101.615461 1842.532449 1995.004604 1471.719424 1207.062843 1132.429095 1.488807287 0.740140278 0.80565968 0.854327821 1.855847285 1.627062089 1.761703769 1.299612868 1.06590589 1 10.14520501 -6.240111357 24.94026162 1.47593874 0.943757463 0.324956959 0.322517273 858.6932377 1004126.402 0.097091137 0.125222606 5.75E-07 6.240111357 -0.532181276 S(ph)SSLSDLTHR ddPTM_A459_MK2206_30min_R2 1 SSSLSDLTHR 10 0 Q5T9C2-3;Q5T9C2-2;Q5T9C2 Q5T9C2-3 FAM102A Protein FAM102A 1 S(0.455)S(0.455)S(0.09)LSDLTHR 101.56 0.010737 6342400 16889 30466 20639 36768 25633 33585 22651 23331 29084 19608 TRUE FALSE 18182.03483 28953.10274 21327.09396 33763.93678 24626.51962 34863.10071 19676.89649 26380.44181 31613.67375 18968.19257 0.958553893 1.526402826 1.124360894 1.780029208 1.298306074 1.837976949 1.037362755 1.390772564 1.666667693 1 14.21129459 -4.753261798 24.80485184 1.420451419 0.958552951 0.182572977 0.283280466 449.8448408 1364384.961 0.065575941 0.714604667 1.76E-05 4.753261798 -0.461898468 S(ph)SSLVDIR ddPTM_A459_MK2206_30min_R1 1 SSSLVDIR 8 0 Q96Q42-3;Q96Q42 Q96Q42-3 ALS2 Alsin 1 S(0.394)S(0.394)S(0.213)LVDIR 117.53 0.0088168 1528400 3522.7 3275.8 3381.7 2392.6 3073.2 2885.2 4219.2 2903.9 3956.9 4606.6 TRUE FALSE 3223.075867 3062.544825 3152.159626 2576.878467 2950.787936 3048.557531 3937.744866 2878.511508 4368.233915 5177.300386 0.622539862 0.591533154 0.608842329 0.497726281 0.569947215 0.588831496 0.760578791 0.555986961 0.843728119 1 12.33798431 -8.575221194 0.853379412 1.005611725 0.581868009 0.779779349 0.069343224 0.312054012 0.500264485 0.065432491 0.023174157 2.66E-09 8.575221194 -0.423743716 S(ph)SSMEIR ddPTM_A459_MK2206_30min_R2 1 SSSMEIR 7 0 E9PK89;Q8TBN0;Q8TBN0-2 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 1 S(0.56)S(0.098)S(0.342)MEIR 95.741 0.023594 7205500 34174 54549 54601 66036 75104 89837 83121 72482 74830 84712 TRUE FALSE 36790.38772 51840.17598 56421.37009 60640.64756 72155.03959 93255.80999 72207.11285 81955.64627 81338.57814 81947.85438 0.448948761 0.632599552 0.688503323 0.739990669 0.880499436 1.137989648 0.88113488 1.000095084 0.992565074 1 16.32241856 -5.763607923 0.864579328 1.003518927 0.473936977 0.859780869 0.074471608 0.28741688 0.389980679 0.033379344 0.110415698 1.72E-06 5.763607923 -0.52958195 down S(ph)SSMELHR ddPTM_A459_MK2206_30min_R1 2 SSSMELHR 8 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.46)S(0.46)S(0.079)MELHR;S(0.45)S(0.45)S(0.101)MELHR 91.867 0.017373 5603300 6456 5232 5726.5 4182 5395.4 6188 7993.2 5486.4 7229.7 9350.1 TRUE FALSE 5906.883298 4891.395849 5337.801135 4504.098365 5180.489793 6538.359212 7459.988212 5438.432983 7981.253187 10508.46098 0.562107364 0.465472143 0.507952701 0.428616367 0.492982731 0.622199504 0.709903023 0.51752897 0.759507334 1 13.35926377 -8.92963389 0.385767855 1.051440609 0.472284076 0.81460344 0.071170059 0.93533956 0.288634676 0.166169296 0.059661687 1.18E-09 8.92963389 -0.579156533 S(ph)SSMSSIDLVSASDDVHR ddPTM_A459_MK2206_30min_R2 1 SSSMSSIDLVSASDDVHR 18 0 A0A2U3TZL3;Q9Y5P4;Q9Y5P4-3;A0A0A0MRE4;A0A2R8YFA1 A0A2U3TZL3 COL4A3BP Collagen type IV alpha-3-binding protein 1 S(0.332)S(0.332)S(0.332)MS(0.004)SIDLVSASDDVHR 190.1 1.49E-10 6143200 11297 18409 13861 14959 16982 20102 16445 11229 12341 12348 TRUE FALSE 12161.90701 17494.83583 14323.11882 13736.80185 16315.20135 20866.9957 14285.75175 12696.66885 13414.39787 11945.08577 1.018151501 1.464605292 1.19908045 1.149996083 1.365850498 1.746910495 1.195952212 1.062919857 1.123005571 1 13.54412959 -7.519770767 23.84064262 1.081664658 1.331507394 0.282597492 0.186777664 100.5963508 771690.9159 0.088936457 0.052732532 3.02E-08 7.519770767 0.249842737 S(ph)SSMSSLTGAYASGIPSSSR ddPTM_A459_MK2206_30min_R1 1 SSSMSSLTGAYASGIPSSSR 20 0 Q96HA1;Q96HA1-2;Q96HA1-3 Q96HA1 POM121 Nuclear envelope pore membrane protein POM 121 1 S(0.386)S(0.386)S(0.228)MSSLTGAYASGIPSSSR 178.51 3.44E-13 2828600 475.11 432.66 532.37 443.89 484.76 499.49 648.54 553.21 420.85 534.04 TRUE FALSE 434.6993996 404.4937554 496.2342077 478.0784847 465.4509827 527.7706921 605.2770799 548.3733433 464.5988635 600.200907 0.724256486 0.673930597 0.82678017 0.79653076 0.775491968 0.879323383 1.008457456 0.913649641 0.774072245 1 9.229301689 -5.901082202 0.521505195 0.930720315 0.657704205 0.551592905 0.071000121 1.274573587 0.579508674 0.055276308 0.188424351 1.26E-06 5.901082202 -0.27301611 S(ph)SSMSYVDGFIGTWPK ddPTM_A459_MK2206_30min_R1 1 SSSMSYVDGFIGTWPK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.889)S(0.023)S(0.088)MSYVDGFIGTWPK 199.84 7.81E-07 44209000 5054.5 4633.8 6009.1 5222 5233.1 4363.4 4974.5 5232.9 4617.8 4464.2 TRUE FALSE 4624.588233 4332.138778 5601.219034 5624.199345 5024.654546 4610.451937 4642.660181 5187.149307 5097.836835 5017.258799 0.921736035 0.863447343 1.116390296 1.120970548 1.001474061 0.918918502 0.925337992 1.033861221 1.016060171 1 12.29268364 -5.237318486 24.94422134 1.014271461 0.892591667 0.373201744 0.064239787 927.379371 959030.7244 0.01850696 0.048911358 5.79E-06 5.237318486 -0.121679794 S(ph)SSNDSVDEETAESDTSPVLEK ddPTM_A459_MK2206_30min_R2 1 SSSNDSVDEETAESDTSPVLEK 22 0 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 S(0.284)S(0.284)S(0.284)NDS(0.149)VDEETAESDTSPVLEK 108.01 3.74E-05 2738700 18889 26896 23664 22940 20927 21618 26362 22258 16987 21721 TRUE FALSE 20335.15636 25560.38375 24452.94595 21065.72862 20105.30083 22440.68814 22900.63773 25167.19702 18464.49855 21012.24555 0.967776448 1.216451792 1.163747392 1.002545329 0.956837325 1.067981434 1.089871032 1.197739526 0.878749418 1 14.35894273 -7.975694968 0.174417029 0.96328846 1.12889181 0.063580617 0.103198107 11.44114655 2.078901136 0.805217152 0.79414197 1.06E-08 7.975694968 0.165603349 S(ph)SSPAELDLKDDLQQTQGK ddPTM_A459_MK2206_30min_R1 2 SSSPAELDLKDDLQQTQGK 19 1 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 1 S(0.333)S(0.333)S(0.333)PAELDLKDDLQQTQGK;S(0.32)S(0.32)S(0.32)PAELDLKDDLQQT(0.039)QGK 122.3 0.00023193 18948800 2692.6 3028.1 3067.7 2419.7 2542.1 1986.57 2310.1 2936.8 2871.8 2551.1 TRUE FALSE 2463.580231 2830.97014 2859.473071 2606.065713 2440.842774 2099.047877 2155.997444 2911.123867 3170.333887 2867.149528 0.859243722 0.987381409 0.997322617 0.908939589 0.851313386 0.732102688 0.751965471 1.015337302 1.105744174 1 11.48540143 -7.935179926 8.470421658 1.055455902 0.874893519 0.466543522 0.0840963 0.262710383 30.80685778 0.053243949 0.025458548 1.16E-08 7.935179926 -0.180562384 S(ph)SSPAELDLKDDLQQTQGK ddPTM_A459_MK2206_30min_R2 2 SSSPAELDLKDDLQQTQGK 19 1 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 1 S(0.333)S(0.333)S(0.333)PAELDLKDDLQQTQGK;S(0.393)S(0.393)S(0.214)PAELDLKDDLQQTQGK 106.73 0.00044529 11197900 69618 67276 67572 74720 68204 51482 79363 59297 55027 70811 TRUE FALSE 74948.00761 63935.17167 69824.81675 68615.13698 65525.96826 53441.18359 68942.54277 67047.3215 59813.14899 68500.44287 1.094124424 0.933354136 1.0193338 1.001674356 0.956577294 0.78015822 1.006453971 0.978786686 0.873179012 1 16.06382569 -6.358702755 4.405425763 0.925774351 1.006980161 0.227784573 0.072341434 0.365875153 12.17578734 0.022793683 0.026092576 4.38E-07 6.358702755 0.08120581 S(ph)SSPAPADIAQTVQEDLR ddPTM_A459_MK2206_30min_R1 1 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 S(0.68)S(0.067)S(0.253)PAPADIAQTVQEDLR 247.91 8.19E-33 4728700 598.63 790.27 919.09 664.16 407 365.06 587.18 446.9 534.69 529.34 TRUE FALSE 547.713375 738.8232794 856.7047315 715.3137183 390.7883282 385.7293817 548.0102936 442.9928004 590.2729389 594.9186355 0.920652577 1.241889622 1.440036806 1.202372351 0.656876932 0.648373338 0.921151668 0.744627541 0.992191039 1 9.21654856 -6.244228932 22.52198545 0.810190738 1.221198819 0.547768885 0.165666288 163.9792177 214585.7714 0.049918636 0.064210779 5.70E-07 6.244228932 0.411008081 S(ph)SSPEDPERDEEVLNHVLR ddPTM_A459_MK2206_30min_R1 2 SSSPEDPERDEEVLNHVLR 19 1 Q8TE67-2;Q8TE67;Q8TE67-3 Q8TE67-2 EPS8L3 Epidermal growth factor receptor kinase substrate 8-like protein 3 1 S(0.333)S(0.333)S(0.333)PEDPERDEEVLNHVLR;S(0.333)S(0.333)S(0.333)PEDPERDEEVLNHVLR 102.67 0.00045779 5951500 1308.56 1369.56 1324.36 1000.42 1779.62 1430.84 1395.16 1257.64 1219.62 1522.59 TRUE FALSE 1197.2601 1280.401395 1234.466133 1077.472522 1708.733967 1511.852924 1302.091422 1246.644586 1346.403863 1711.219944 0.699652961 0.748238939 0.721395363 0.629651685 0.998547249 0.883494217 0.760914122 0.728512188 0.786809357 1 10.74080949 -6.237904973 24.95135747 0.842387624 0.704746516 0.422237368 0.090247278 938.8925121 995421.0163 0.028092652 0.036244858 5.78E-07 6.237904973 -0.137641108 S(ph)SSPEDPERDEEVLNHVLR ddPTM_A459_MK2206_30min_R2 3 SSSPEDPERDEEVLNHVLR 19 1 Q8TE67-2;Q8TE67;Q8TE67-3 Q8TE67-2 EPS8L3 Epidermal growth factor receptor kinase substrate 8-like protein 3 1 S(0.333)S(0.333)S(0.333)PEDPERDEEVLNHVLR;S(0.333)S(0.333)S(0.333)PEDPERDEEVLNHVLR;S(0.423)S(0.423)S(0.154)PEDPERDEEVLNHVLR 81.016 0.00256 16323400 21482.1 24066.3 23270 27470.1 21335.5 25211.8 23994.5 22115.5 20438.9 23932.6 TRUE FALSE 23126.78609 22871.20254 24045.81019 25225.70496 20497.76107 26171.25272 20843.99333 25006.07178 22216.63858 23151.68122 0.998924695 0.98788517 1.038620477 1.089584152 0.885368145 1.130425582 0.900323097 1.080097447 0.959612322 1 14.49882934 S(ph)SSPELVTHLK ddPTM_A459_MK2206_30min_R1 2 SSSPELVTHLK 11 0 E9PNR6;H0YE29;Q07960 E9PNR6 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.519)S(0.24)S(0.24)PELVTHLK;S(0.333)S(0.333)S(0.333)PELVTHLK 137.62 0.00087165 80200000 26617 25074 25218 21270.7 24461 21715.5 23975 22672.7 21306.1 18274.9 TRUE FALSE 24353.08438 23441.67804 23506.27242 22908.973 23486.66657 22945.01284 22375.67149 22474.47497 23520.94534 20538.93258 1.185703506 1.141328935 1.144473907 1.11539258 1.143519337 1.117147289 1.089427185 1.094237731 1.145188303 1 14.32607359 -14.52287875 0.112582721 0.596253036 1.197481928 0.769612286 0.022783272 77.83527791 0.576768215 7.25691612 0.266932622 3.00E-15 14.52287875 0.601228892 S(ph)SSPELVTHLK ddPTM_A459_MK2206_30min_R2 3 SSSPELVTHLK 11 0 E9PNR6;H0YE29;Q07960 E9PNR6 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.779)S(0.074)S(0.148)PELVTHLK;S(0.333)S(0.333)S(0.333)PELVTHLK;S(0.333)S(0.333)S(0.333)PELVTHLK 169.09 0.000292 129064000 405575 472636 430541 482843 468530 389074 482280 369098 389885 406282 TRUE FALSE 436626.1338 449165.5835 444895.0221 443393.1824 450133.158 403880.4837 418956.0567 417340.3759 423796.4925 393025.0516 1.110937158 1.142842121 1.131976245 1.128155013 1.145303986 1.027620204 1.065977995 1.06186711 1.078293841 1 18.58426175 -6.756590956 24.99999967 1.051820157 1.132256506 0.781427238 0.022420797 56.5969331 291831.3685 0.007201002 0.006982218 1.75E-07 6.756590956 0.080436349 S(ph)SSPFLSK ddPTM_A459_MK2206_30min_R2 1 SSSPFLSK 8 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.333)S(0.333)S(0.333)PFLS(0.001)K 99.013 0.018995 12704000 191700 200070 173100 168170 149210 126680 166050 150340 133650 169300 TRUE FALSE 206376.6994 190134.8147 178871.0676 154429.9731 143351.2657 131500.8962 144247.4355 169989.9542 145274.6354 163775.7549 1.260117528 1.160946044 1.092170619 0.942935498 0.87528991 0.802932621 0.880761842 1.037943341 0.887033832 1 17.32136227 -5.513708298 1.667446869 0.907372682 1.233520592 0.774909709 0.065010839 0.193952864 1.029354485 0.021065767 0.063282859 3.06E-06 5.513708298 0.32614791 S(ph)SSPGKPQAVSSLNSSHSR ddPTM_A459_MK2206_30min_R1 1 SSSPGKPQAVSSLNSSHSR 19 1 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.462)S(0.462)S(0.075)PGKPQAVSSLNSSHSR 111.77 0.00025695 31630000 6734.2 3248.6 4561.3 2716.1 9992.5 9870.4 8890.1 6989.1 3144.3 3053.2 TRUE FALSE 6161.420927 3037.11555 4251.691665 2925.294493 9594.477566 10429.25352 8297.05765 6927.995036 3471.161237 3431.453466 1.795571756 0.885081374 1.239035209 0.852494292 2.796038955 3.039310782 2.417942639 2.018968085 1.011571706 1 11.74460408 -6.250266722 24.94378631 2.166385913 1.174333159 0.26941499 0.67192981 881.6577775 1968365.519 0.205771745 0.263124416 5.62E-07 6.250266722 -0.992052754 S(ph)SSPGKPQAVSSLNSSHSR ddPTM_A459_MK2206_30min_R2 2 SSSPGKPQAVSSLNSSHSR 19 1 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.333)S(0.333)S(0.333)PGKPQAVSSLNSSHSR;S(0.452)S(0.452)S(0.095)PGKPQAVSSLNSSHSR 144.08 2.84E-05 100220000 58321 187355 130425 256105 247176 256869 244448 165466 224149 133465 TRUE FALSE 62786.1006 178051.2231 134773.3044 235180.4023 237470.6283 266644.3298 212351.684 187092.9743 243645.0749 129110.048 0.486299104 1.37906558 1.043863793 1.821549956 1.839288514 2.065248476 1.644733987 1.449096931 1.887111644 1 16.97824176 -4.754131592 1.031978898 1.696387869 2.51E-12 0.510769803 0.327844384 1.550115335 1.282200518 0.104350047 2.959507277 1.76E-05 4.754131592 -1.696387869 S(ph)SSPTQYGLTK ddPTM_A459_MK2206_30min_R1 2 SSSPTQYGLTK 11 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 S(0.379)S(0.379)S(0.24)PT(0.001)QYGLTK;S(0.333)S(0.333)S(0.333)PTQYGLTK 203.88 1.79E-05 188288000 12043.7 12683.9 12978.7 12297.8 13157.7 10921 12392 13130.9 11031.6 10657.4 TRUE FALSE 11019.32007 11858.1758 12097.742 13244.97869 12633.60095 11539.33758 11565.35229 13016.09793 12178.3743 11977.71917 0.919984841 0.990019522 1.010020508 1.105801405 1.054758487 0.963400245 0.96557217 1.086692528 1.016752365 1 13.54806559 -4.832640149 2.078243678 1.027883396 0.897629993 0.347951591 0.044109478 0.749572644 3.999253999 0.01272873 0.179757079 1.47E-05 4.832640149 -0.130253403 S(ph)SSPTSYWK ddPTM_A459_MK2206_30min_R2 1 SSSPTSYWK 9 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(0.898)S(0.071)S(0.029)PTS(0.001)YWK 144.77 0.0019179 11192000 114790 95822 103340 107390 88380 88450 104190 105470 77779 100890 TRUE FALSE 123578.4107 91063.61882 106785.304 98615.89348 84909.75713 91816.02673 90509.72785 119255.2911 84544.07683 97597.96756 1.266198608 0.933048311 1.094134506 1.010429786 0.869995137 0.940757569 0.927373081 1.221903428 0.866248334 1 16.57456348 -4.754286712 24.9948719 0.989258245 1.266199091 0.405014414 0.10216811 260.6958481 910918.6848 0.025045671 0.247646968 1.76E-05 4.754286712 0.276940845 S(ph)SSPVGLAK ddPTM_A459_MK2206_30min_R2 1 SSSPVGLAK 9 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.375)S(0.375)S(0.251)PVGLAK 99.788 0.018495 10436000 121680 131750 126980 143130 146050 113060 143130 110570 115860 138800 TRUE FALSE 130995.9144 125207.4866 131213.4498 131435.8211 140315.3432 117362.5775 124336.8591 125021.8786 125937.2934 134270.9674 0.975608629 0.932498581 0.977228752 0.97888489 1.045016253 0.87407263 0.926014473 0.931116243 0.93793391 1 17.03478787 -6.769539213 24.99989405 0.929033922 0.978684644 0.275935599 0.038333094 243.2409637 750751.3123 0.013377678 0.012003356 1.70E-07 6.769539213 0.049650721 S(ph)SSPVTELASR ddPTM_A459_MK2206_30min_R1 1 SSSPVTELASR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.561)S(0.061)S(0.376)PVT(0.001)ELASR 98.898 0.017791 5490700 4099.1 5089.2 5260 5122.5 4695.8 4512.9 4934.2 5478.7 4352.8 4518.8 TRUE FALSE 3750.45002 4757.892155 4902.965855 5517.035838 4508.756342 4768.416498 4605.048521 5430.800304 4805.289137 5078.623059 0.738477728 0.936846877 0.965412435 1.086325127 0.887791098 0.93891916 0.906751391 1.069345025 0.946179522 1 12.31022168 -4.741493106 2.94699243 0.974076107 0.684637612 0.577815214 0.060361175 0.343352539 3.882538485 0.015558544 0.250311133 1.81E-05 4.741493106 -0.289438495 S(ph)SSQENLLDEVMK ddPTM_A459_MK2206_30min_R2 1 SSSQENLLDEVMK 13 0 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;H0Y470;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.451)S(0.098)S(0.451)QENLLDEVMK 120.32 0.0030585 3267900 7215.6 7910 7730.4 10762 9198.8 8024.4 8966 10446 9712.5 9473.3 TRUE FALSE 7768.031884 7517.200902 7988.127678 9882.710174 8837.608892 8329.774165 7788.75343 11811.32807 10557.27569 9164.186997 0.847650958 0.820280174 0.871667905 1.078405556 0.964363658 0.908948515 0.849912102 1.288857164 1.152014434 1 13.16179118 -7.752652762 24.99992248 1.165326862 0.910282768 0.570208498 0.095457192 128.6587159 366065.8408 0.04748508 0.026880021 1.77E-08 7.752652762 -0.255044095 S(ph)SSQLGSPDVSHLIR ddPTM_A459_MK2206_30min_R2 1 SSSQLGSPDVSHLIR 15 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 S(0.432)S(0.244)S(0.324)QLGSPDVSHLIR 118.23 0.0013553 2328700 3657.4 5867.1 5652.9 6286.3 4771.5 5201.8 5746.3 1690.9 3180.9 4778.4 TRUE FALSE 3937.413356 5575.748346 5841.364865 5772.689181 4584.146935 5399.758144 4991.803907 1911.906436 3457.568932 4622.481199 0.851796511 1.206224126 1.263686019 1.248829131 0.991706994 1.168151456 1.079897071 0.41361043 0.747989831 1 12.17445174 -7.644376268 7.721406865 0.687603237 1.130940208 0.509909989 0.176819803 0.163625621 10.33274991 0.081272718 0.046624133 2.27E-08 7.644376268 0.443336971 S(ph)SSSGSDDYAYTQALLLHQR ddPTM_A459_MK2206_30min_R1 1 SSSSGSDDYAYTQALLLHQR 20 0 F6SS63;Q8N5C8-2;Q8N5C8 F6SS63 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 1 S(0.432)S(0.432)S(0.107)S(0.027)GS(0.002)DDYAYTQALLLHQR 133.98 8.37E-05 6231800 753.98 803.55 746.27 770.11 688.55 693.7 694.17 721.89 635.82 442.07 TRUE FALSE 689.8500417 751.2387489 695.6152716 829.4240056 661.1235955 732.9766945 647.8631859 715.5785918 701.9157643 496.8369691 1.388483717 1.512042774 1.400087584 1.669408795 1.33066506 1.47528614 1.303975401 1.440268411 1.412768791 1 8.956628717 -12.73332669 0.26603736 1.56E-13 1.480013662 0.663032836 0.094728021 40.42841977 0.931763548 22.47980998 0.11849171 1.85E-13 12.73332669 1.480013662 S(ph)SSSSASPSSPSSR ddPTM_A459_MK2206_30min_R1 1 SSSSSASPSSPSSR 14 0 E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.453)S(0.002)SSSAS(0.029)PS(0.293)S(0.205)PS(0.017)S(0.001)R 96.665 0.011638 1760900 648.75 1582.8 839.82 1087.5 377.39 317.38 718.28 641.65 214.42 805.55 TRUE FALSE 593.5704058 1479.759432 782.8153583 1171.259438 362.3577572 335.3497813 670.3648518 636.0401217 236.7097263 905.3476156 0.655627071 1.634465488 0.864657226 1.293712402 0.400241577 0.370409968 0.740450232 0.702536916 0.261457281 1 9.822328023 -6.261455798 24.99971309 0.561934245 1.131750672 0.410613929 0.312031671 1.359782591 2069782.67 0.08917597 0.107828436 5.48E-07 6.261455798 0.569816427 S(ph)SSTEPPPPVR ddPTM_A459_MK2206_30min_R2 1 SSSTEPPPPVR 11 0 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 S(0.622)S(0.042)S(0.315)T(0.022)EPPPPVR 184.36 2.56E-05 32335000 24433 29886 27004 31375 29080 31901 33308 21253 23329 28159 TRUE FALSE 26303.60927 28401.9047 27904.29988 28811.56214 27938.17308 33115.01491 28934.61959 24030.84007 25358.11425 27240.17414 0.96561825 1.042647692 1.024380378 1.057686415 1.02562388 1.215668253 1.062203914 0.88218379 0.930908669 1 14.73344831 -7.748714669 24.75174308 0.92990968 1.059518986 0.404568576 0.065627868 184.1007911 358109.2648 0.032428226 0.018560395 1.78E-08 7.748714669 0.129609306 S(ph)SSVGS(ph)SSSYPISPAVSR ddPTM_A459_MK2206_30min_R1 2 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 S(0.988)S(0.008)S(0.004)VGS(0.555)S(0.36)S(0.071)S(0.014)YPISPAVSR;S(0.871)S(0.051)S(0.078)VGS(0.56)S(0.357)S(0.069)S(0.014)YPISPAVSR 186.17 3.33E-09 22460000 6279 5170.4 5872.5 4814.5 8984 9355.2 12194.3 13738.4 13316 11344.8 TRUE FALSE 5744.938078 4833.80602 5473.891062 5185.313624 8626.148256 9884.883339 11380.8405 13618.28662 14700.24585 12750.27947 0.450573502 0.379113731 0.429315379 0.40668235 0.676545818 0.775267974 0.892595376 1.068077499 1.152935187 1 13.63824125 -6.896869399 0.953491137 1.091162762 0.393799351 0.958464037 0.057394751 0.099227735 0.190750317 0.036783278 0.029397666 1.27E-07 6.896869399 -0.697363411 down S(ph)SSVGSS(ph)SSYPISPAVSR ddPTM_A459_MK2206_30min_R1 2 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 S(0.553)S(0.122)S(0.325)VGS(0.246)S(0.636)S(0.1)S(0.016)YPIS(0.001)PAVSR;S(0.989)S(0.008)S(0.003)VGS(0.013)S(0.802)S(0.155)S(0.03)YPISPAVSR 175.7 4.42E-08 24230000 4334.4 4574.7 4425 3974.8 5926.1 6337.2 8455.8 9351 8864 7989.2 TRUE FALSE 3965.736519 4276.886199 4124.643329 4280.939785 5690.050888 6696.006787 7891.72901 9269.245193 9785.44452 8978.962411 0.441669799 0.476322987 0.459367479 0.476774441 0.633709178 0.745743938 0.878913247 1.032329212 1.089819076 1 13.13233302 -7.020485514 0.970220968 1.064102076 0.449427095 0.982118929 0.033023512 0.065123309 0.126232739 0.022404413 0.015855796 9.54E-08 7.020485514 -0.614674982 down S(ph)SSVGSSSSYPIS(ph)PAVSR ddPTM_A459_MK2206_30min_R1 2 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 S(0.774)S(0.042)S(0.184)VGSSSSYPIS(1)PAVSR;S(0.976)S(0.005)S(0.019)VGSSSS(0.003)YPIS(0.997)PAVSR 253.52 5.09E-32 62985000 7080.9 5999.5 6332 5137.2 7533.3 8141.4 10321.5 11431.1 10500.1 10487 TRUE FALSE 6478.632272 5608.93146 5902.201482 5532.868034 7233.232709 8602.359032 9632.971568 11331.1591 11591.62297 11786.20873 0.549679071 0.475889371 0.500771844 0.469435775 0.613703089 0.72986651 0.817308753 0.961391348 0.983490385 1 13.5248121 -7.133773261 0.982585212 1.002626622 0.489538803 0.977300687 0.031075863 0.073830924 0.142846493 0.022117324 0.014095 7.35E-08 7.133773261 -0.513087818 S(ph)SSVGSSSSYPIS(ph)PAVSR ddPTM_A459_MK2206_30min_R2 1 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 S(0.714)S(0.217)S(0.069)VGSSS(0.001)S(0.009)YPIS(0.99)PAVSR 190.37 4.17E-09 50667000 18817 24280 26394 22706 23712 27010 38915 30121 35108 31697 TRUE FALSE 20257.64399 23074.29051 27273.96279 20850.84717 22780.94774 28037.88448 33805.41375 34057.91812 38161.63038 30662.72949 0.660660167 0.75251913 0.889482549 0.680006233 0.742952376 0.914396238 1.102491993 1.110726889 1.244560775 1 14.90419851 -7.077335925 2.229603118 1.131075576 0.748875443 0.825509447 0.079869653 0.124274165 1.220571131 0.035487256 0.026455841 8.37E-08 7.077335925 -0.382200133 S(ph)SSVGSSSSYPISPAVSR ddPTM_A459_MK2206_30min_R1 1 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 S(0.484)S(0.033)S(0.484)VGSSSSYPISPAVSR 335.62 8.77E-145 1551800000 3269.8 4519.4 3580.1 2924.5 4417.1 5742.3 7030.2 6349.4 6518.7 6352.2 TRUE FALSE 2991.68634 4225.186239 3337.092787 3149.745497 4241.157554 6067.424064 6561.228185 6293.887865 7196.342192 7139.158493 0.419053078 0.591832531 0.467435033 0.441192824 0.594069673 0.849879446 0.919047839 0.881600804 1.008009866 1 12.80153832 -6.757582361 2.218454727 0.942245797 0.485734204 0.939946341 0.055247096 0.069208052 0.699850931 0.021443602 0.019819429 1.75E-07 6.757582361 -0.456511593 S(ph)SSVLSLEGSEK ddPTM_A459_MK2206_30min_R1 1 SSSVLSLEGSEK 12 0 A1L390-3;A1L390;G3V311;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(0.594)S(0.039)S(0.175)VLS(0.192)LEGSEK 216.68 5.20E-08 41375000 3809.5 3666.9 4090.2 3785.9 3378.4 3302.6 3349 3537.6 3176.5 3074 TRUE FALSE 3485.482021 3428.184144 3812.56862 4077.490674 3243.831174 3489.590358 3125.594321 3506.671136 3506.708542 3454.830328 1.008872127 0.992287267 1.103547283 1.180228922 0.938926334 1.010061284 0.904702699 1.015005312 1.01501614 1 11.75439914 -6.300858948 24.9999397 0.979045229 1.067903104 0.364774273 0.058493161 636.7909456 403852.0686 0.019266617 0.021846583 5.00E-07 6.300858948 0.088857875 S(ph)SSVPHPFQVTLLR ddPTM_A459_MK2206_30min_R2 1 SSSVPHPFQVTLLR 14 0 Q5VV41;Q5VV41-2 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 S(0.591)S(0.282)S(0.127)VPHPFQVT(0.001)LLR 98 0.010701 8136900 9012.9 18598 15420 16703 20257 17519 19322 14976 17911 14914 TRUE FALSE 9702.934554 17674.45036 15934.0951 15338.31147 19461.6084 18185.69782 16784.99819 16933.41462 19468.8664 14427.3574 0.6725372 1.225064984 1.104436153 1.063140743 1.348937845 1.260500958 1.163414597 1.173701749 1.349440917 1 13.81651945 -4.759304916 24.99794404 1.193126459 0.672536532 0.669784578 0.108439394 33.00897228 386494.1175 0.026602333 0.170523308 1.74E-05 4.759304916 -0.520589927 S(ph)STDSLPGPISR ddPTM_A459_MK2206_30min_R2 1 SSTDSLPGPISR 12 0 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 S(0.856)S(0.143)TDSLPGPISR 166.62 0.00046273 14462000 45273 51742 57356 59962 41224 55261 57301 52133 48235 51171 TRUE FALSE 48739.13569 49172.56752 59268.22041 55062.91279 39605.33863 57363.99608 49777.30987 58946.9621 52430.39311 49501.29446 0.984603256 0.993359225 1.197306476 1.112352988 0.800086928 1.158838303 1.005575923 1.190816578 1.059172163 1 15.59517863 S(ph)STETCYSAIPK ddPTM_A459_MK2206_30min_R2 4 SSTETCYSAIPK 12 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 S(0.563)S(0.425)T(0.012)ETCYSAIPK;S(0.988)S(0.012)TETCYSAIPK;S(0.992)S(0.008)TETCYSAIPK;S(0.993)S(0.007)TETCYSAIPK 279.75 5.07E-44 33765600 184858 215257 191134 218421 234773 182571 238225 188160 180948 202193 TRUE FALSE 199010.8706 204567.6504 197506.3122 200575.3056 225554.6324 189518.8673 206945.7713 212753.158 196686.53 195595.459 1.01746161 1.045871164 1.009769415 1.02545993 1.153169064 0.968932859 1.058029529 1.087720334 1.005578202 1 17.57751335 -6.069293171 25 1.050618184 1.02502848 0.036169771 0.04892442 531.9391057 191913.5368 0.014025324 0.018106618 8.53E-07 6.069293171 -0.025589704 S(ph)STGPEPPAPTPLLAER ddPTM_A459_MK2206_30min_R1 1 SSTGPEPPAPTPLLAER 17 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.499)S(0.499)T(0.001)GPEPPAPTPLLAER 230.96 1.89E-16 4385500 983.7 863.84 800.39 651.19 900.6 765.53 960.02 749.36 889.87 1245.4 TRUE FALSE 900.0311494 807.603859 746.0617568 701.3447666 864.7271949 808.873647 895.9788175 742.8084245 982.3751709 1399.689554 0.643021981 0.576987845 0.53301945 0.501071659 0.617799277 0.577895037 0.640126816 0.530695126 0.701852184 1 10.45089116 -8.638275872 3.214551352 0.999887142 0.577503649 0.890119401 0.044945845 0.148073688 3.257171376 0.044246457 0.011720631 2.30E-09 8.638275872 -0.422383493 S(ph)STGPEPPAPTPLLAER ddPTM_A459_MK2206_30min_R2 2 SSTGPEPPAPTPLLAER 17 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.693)S(0.304)T(0.003)GPEPPAPTPLLAER;S(0.796)S(0.022)T(0.182)GPEPPAPTPLLAER 123.42 0.0010814 3469800 22122.7 18776.5 15983.7 18896.9 15571.3 16872.1 17431.4 14892.4 14340.7 18537.1 TRUE FALSE 23816.43092 17844.08631 16516.58858 17352.96282 14959.89252 17514.17959 15142.63624 16838.88781 15588.02816 17932.23595 1.328135041 0.995084292 0.921055725 0.967696548 0.8342458 0.976686881 0.844436594 0.939028901 0.869274095 1 14.13026777 -4.67368509 2.189256286 0.914311667 1.524424243 0.840705567 0.053170492 0.323005791 1.381320693 0.012873222 0.430116827 2.12E-05 4.67368509 0.610112576 S(ph)STPEMPAVSAFFSLAALAEVAAMENVHR ddPTM_A459_MK2206_30min_R1 1 SSTPEMPAVSAFFSLAALAEVAAMENVHR 29 0 C9JA69;Q8WY36-2;Q8WY36;H7C1Q0 C9JA69;H7C1Q0 BBX HMG box transcription factor BBX 1 S(0.333)S(0.333)T(0.333)PEMPAVSAFFSLAALAEVAAMENVHR 60.172 0.004579 9032300 367.92 283.61 254.52 328.25 394.32 402.16 335.71 324.27 207.51 398.89 TRUE FALSE 336.626472 265.1469375 237.2438915 353.5318719 378.6133994 424.9299517 313.3153984 321.4349416 229.0814071 448.3075047 0.750882973 0.591439882 0.529199019 0.788592357 0.844539508 0.947853755 0.698885018 0.716996566 0.510991685 1 8.80834484 -5.781710866 24.75208575 0.78049386 0.620600556 0.226131712 0.137790115 325.0067403 396841.7086 0.039917703 0.059292901 1.65E-06 5.781710866 -0.159893304 S(ph)STPLHS(ph)PSPIR ddPTM_A459_MK2206_30min_R1 1 SSTPLHSPSPIR 12 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 2 S(0.893)S(0.043)T(0.064)PLHS(0.699)PS(0.301)PIR 135.91 0.026403 13521000 2663.6 2447.2 2118.5 2380.7 3006 2430.8 3052 2576.9 2054.3 1874.3 TRUE FALSE 2437.046833 2287.886835 1974.702122 2564.061927 2886.264655 2568.429795 2848.406649 2554.370435 2267.851836 2106.502434 1.15691622 1.086106903 0.937431683 1.217212895 1.370169152 1.219286412 1.352197179 1.212612145 1.076595877 1 11.04063387 -5.878897502 9.370758463 1.230071735 1.063090319 0.233247855 0.116874108 0.345425509 26.72713699 0.032659258 0.048528896 1.32E-06 5.878897502 -0.166981415 S(ph)STPLSEAK ddPTM_A459_MK2206_30min_R1 2 SSTPLSEAK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.471)S(0.471)T(0.058)PLSEAK;S(0.313)S(0.313)T(0.308)PLS(0.066)EAK 134.84 0.0027851 51201000 19933.4 18368.3 17016.2 14322.5 14121.6 11743.8 15382.6 13961.9 14458.5 12803.8 TRUE FALSE 18237.95966 17172.52033 15861.18775 15425.62143 13559.10677 12408.72381 14356.45482 13839.83258 15961.51282 14390.03141 1.267402352 1.193362255 1.102234408 1.071965793 0.942256927 0.862313879 0.997666677 0.96176528 1.109206253 1 13.81278212 -5.477055404 1.278368118 0.974890813 1.264886951 0.720716401 0.061262966 0.309590095 0.885596756 0.021155423 0.084769125 3.33E-06 5.477055404 0.289996138 S(ph)STPSHGQTTATEPTPAQK ddPTM_A459_MK2206_30min_R2 1 SSTPSHGQTTATEPTPAQK 19 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 S(0.329)S(0.329)T(0.329)PS(0.013)HGQTTATEPTPAQK 115.66 0.00031283 7612800 12168 23485 20029 31418 23642 25608 26697 21207 22313 24170 TRUE FALSE 13099.59144 22318.76905 20696.75686 28851.0489 22713.69629 26582.53038 23191.65183 23978.82771 24253.74441 23381.33488 0.560258493 0.954554954 0.885182859 1.233935062 0.97144566 1.136912436 0.991887416 1.025554265 1.037312221 1 14.51306968 -4.467222536 1.412810498 1.047497205 5.22E-19 0.722066697 0.088357853 1.314382105 1.343485408 0.023825122 2.419741356 3.41E-05 4.467222536 -1.047497205 S(ph)STPSPSPLNLSSSR ddPTM_A459_MK2206_30min_R2 1 SSTPSPSPLNLSSSR 15 0 P37275-3;P37275-4;P37275-5;P37275;P37275-2 P37275-3 ZEB1 Zinc finger E-box-binding homeobox 1 1 S(0.333)S(0.333)T(0.333)PSPSPLNLSSSR 160.87 0.00012531 4979100 29159 36826 28947 36208 37914 28836 36297 27712 33730 31475 TRUE FALSE 31391.43546 34997.27439 29912.07853 33249.69058 36425.30586 29933.37419 31531.1603 31334.05355 36663.77443 30447.97333 1.03098604 1.149412278 0.982399656 1.092016543 1.196312985 0.983099068 1.035575011 1.029101452 1.204144986 1 14.89405858 -10.73994028 3.706240092 0.999911885 1.075795913 0.083431115 0.077331696 9341466.441 9023237.692 6029.732822 0.018229221 1.82E-11 10.73994028 0.075884028 S(ph)STQTLEDSWR ddPTM_A459_MK2206_30min_R1 3 SSTQTLEDSWR 11 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 S(0.864)S(0.136)TQTLEDSWR;S(0.626)S(0.32)T(0.053)QT(0.002)LEDSWR;S(0.758)S(0.104)T(0.022)QT(0.105)LEDS(0.011)WR 203.74 1.80E-05 31098300 6558.8 6655.9 6112.5 5090.08 5931.6 5899.7 5231 4939.9 3955.84 3804.26 TRUE FALSE 6000.939618 6222.5997 5697.60053 5482.118844 5695.331812 6233.735916 4882.049534 4896.710975 4367.063724 4275.560449 1.403544562 1.455388077 1.332597351 1.282198886 1.332066726 1.457992698 1.141850195 1.145279323 1.021401469 1 12.06189783 -7.427218826 3.524654233 1.070440182 1.372122767 0.841493181 0.064259608 0.104516781 2.418682123 0.031805632 0.019892638 3.74E-08 7.427218826 0.301682586 S(ph)STQTLEDSWR ddPTM_A459_MK2206_30min_R2 2 SSTQTLEDSWR 11 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 S(0.837)S(0.162)TQTLEDSWR;S(0.526)S(0.473)T(0.001)QTLEDSWR 203.74 1.80E-05 26414000 89302 97991 80848 97425 89606 80380 78883 57319 58969 65687 TRUE FALSE 96139.02978 93124.90943 83543.43197 89465.06585 86087.61821 83438.91722 68525.56734 64810.79011 64098.01703 63543.63857 1.51296073 1.465526865 1.31474108 1.407931114 1.354779489 1.313096308 1.078401692 1.019941438 1.008724374 1 15.95546008 -7.203148895 1.383450239 0.994424647 1.420179447 0.932736096 0.049394529 0.10862261 0.408797762 0.031234905 0.019206705 6.26E-08 7.203148895 0.425754801 S(ph)STSSEPTPTVK ddPTM_A459_MK2206_30min_R1 1 SSTSSEPTPTVK 12 0 F8WAN1;Q69YQ0-2;Q69YQ0;A0A494C1J1 F8WAN1 SPECC1L-ADORA2A;SPECC1L Cytospin-A 1 S(0.928)S(0.071)T(0.001)SSEPTPTVK 184.34 0.00010441 6449400 3168.5 3435.4 3039.7 2456.9 2347.7 2406.4 2421.7 2211.7 2694.5 2935.1 TRUE FALSE 2899.002437 3211.754836 2833.373633 2646.130864 2254.186138 2542.648288 2260.152812 2192.36334 2974.602917 3298.722347 0.87882584 0.973636001 0.858930621 0.802168411 0.68335128 0.770797909 0.685160063 0.664609843 0.901743949 1 11.68769164 -5.67590623 2.609513543 0.76136754 0.925088658 0.21054623 0.101836359 0.325733575 4.479074303 0.028132496 0.054688759 2.11E-06 5.67590623 0.163721118 S(ph)STSSIDSNISSK ddPTM_A459_MK2206_30min_R2 1 SSTSSIDSNISSK 13 0 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;Q8IVL1-5;E9PNV5 A0A0A0MTL4 NAV2 Neuron navigator 2 1 S(0.481)S(0.481)T(0.014)S(0.017)S(0.007)IDSNISSK 128.85 0.0017519 0 21157 22322 19216 23258 15861 15924 15746 13643 16358 17619 TRUE FALSE 22776.79619 21213.52194 19856.65185 21357.747 15238.21744 16529.99898 13678.53129 15426.18694 17780.78927 17044.09347 1.336345416 1.244626003 1.165016601 1.253087883 0.894046813 0.969837381 0.802537918 0.905075237 1.043222938 1 14.05698425 -6.258993579 24.99588406 0.926080564 1.243347894 0.817343301 0.07260309 89.77327511 917475.0572 0.022283662 0.027429687 5.51E-07 6.258993579 0.31726733 S(ph)STVPSSNTASGGMTR ddPTM_A459_MK2206_30min_R1 1 SSTVPSSNTASGGMTR 16 0 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YIY6;P27448-6;P27448-7;A2SY06;H0YKP9 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 S(0.726)S(0.137)T(0.137)VPSSNTASGGMTR 157.37 7.68E-05 7388000 1978 1636.8 1433.9 1135.6 1431.3 1758.4 1464.3 1307.3 1220.7 1079.5 TRUE FALSE 1809.760713 1530.244022 1336.570863 1223.064109 1374.28829 1857.959088 1366.619219 1295.870414 1347.596133 1213.23661 1.49167994 1.261290675 1.101657214 1.008100233 1.132745483 1.531407042 1.126424316 1.068110213 1.110744699 1 10.24464522 -4.842246403 2.818491022 1.147348588 1.530007681 0.371494814 0.141293923 0.437074786 5.299094086 0.038841313 0.366450254 1.44E-05 4.842246403 0.382659094 S(ph)SVDLEESSTK ddPTM_A459_MK2206_30min_R1 1 SSVDLEESSTK 11 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 S(0.5)S(0.5)VDLEESSTK 295.26 1.96E-53 14862000 3461 3750.8 3254.6 3055 2968.9 2838.3 3243 3134.1 3188.6 2951.9 TRUE FALSE 3166.623776 3506.622238 3033.68682 3290.296629 2850.642426 2999.002093 3026.665387 3106.698894 3520.066381 3317.603658 0.954491284 1.056974431 0.91442111 0.99176905 0.859247433 0.903966357 0.912304693 0.936428584 1.061026796 1 11.69592583 -8.250749701 24.30177649 1.030513397 0.940916392 0.315584845 0.052609666 539.8407968 1227277.822 0.038301695 0.01410724 5.61E-09 8.250749701 -0.089597005 S(ph)SVELPPYSGTVLCGTQAVDKLPDGQEYQR ddPTM_A459_MK2206_30min_R2 1 SSVELPPYSGTVLCGTQAVDKLPDGQEYQR 30 1 Q14694;Q14694-3;Q14694-2;H3BQC6 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 S(0.469)S(0.469)VELPPY(0.006)S(0.025)GT(0.025)VLCGT(0.006)QAVDKLPDGQEYQR 55.033 0.0030146 3167800 3684.7 5873 3077.5 4140.9 5191.9 2927 4263.3 3522.7 5223.9 5440.3 TRUE FALSE 3966.803465 5581.35536 3180.102314 3802.575224 4988.039919 3038.389036 3703.523589 3983.128985 5678.265379 5262.783457 0.753746282 1.060532968 0.604262429 0.722540696 0.947795014 0.57733499 0.703719547 0.756848352 1.078947182 1 12.36161032 -8.257588761 24.70379045 1.039473613 0.766550875 0.38584155 0.138084831 273.1009249 1752124.201 0.102182244 0.035307343 5.53E-09 8.257588761 -0.272922738 S(ph)SVFDEDK ddPTM_A459_MK2206_30min_R2 1 SSVFDEDK 8 0 A0A0A0MRF6;Q99996-5;Q99996-3;Q99996;Q99996-1;Q99996-6;A0A087WX84;A0A6I8PUA5;A0A0A0MRE9;Q99996-4 A0A0A0MRF6 AKAP9 A-kinase anchor protein 9 1 S(0.989)S(0.011)VFDEDK 92.467 0.025424 16858000 22224 31910 21196 21506 21977 27920 31164 22588 18733 23455 TRUE FALSE 23925.48653 30325.3958 21902.66406 19748.89101 21114.07255 28982.51516 27072.12937 25540.32916 20362.36248 22689.66527 1.054466262 1.336529007 0.965314552 0.870391465 0.930559015 1.277344325 1.193148028 1.125637106 0.89742895 1 14.46974771 -9.217914465 0.010106711 5.09E-06 2.088345906 0.029699247 0.151714114 15367.38835 56.87715921 6048.295268 5699.647389 6.05E-10 9.217914465 2.088340818 S(ph)SVSDAPVHITASGEPVPISEESEELDQK ddPTM_A459_MK2206_30min_R2 1 SSVSDAPVHITASGEPVPISEESEELDQK 29 0 O14646;O14646-2;H0Y8V4;A0A087WVF4 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(0.333)S(0.333)VS(0.333)DAPVHIT(0.002)ASGEPVPISEESEELDQK 81.726 1.38E-05 2374200 3537.2 3184.9 3576.5 5013.9 2993.9 3296.7 3245.7 2432.3 2906.5 3165.3 TRUE FALSE 3808.010752 3026.742497 3695.738725 4604.248331 2876.344443 3422.158229 2819.535691 2750.209961 3159.302116 3062.01652 1.243628415 0.988480133 1.206962373 1.503665412 0.93936281 1.117615861 0.920810085 0.898169537 1.031771741 1 11.58026635 -6.371709587 21.97232263 0.982982338 1.216772182 0.469907915 0.130003718 10.08012826 1994.02598 0.041943086 0.047558947 4.25E-07 6.371709587 0.233789844 S(ph)SVSSVGAR ddPTM_A459_MK2206_30min_R1 1 SSVSSVGAR 9 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67;Q8N4M4;E9PRA3;E9PRP1;E9PS62;Q9BZ68 Q9BZ67-2 FRMD8;FRMD8P1 FERM domain-containing protein 8;Putative FERM domain-containing protein FRMD8P1 1 S(0.5)S(0.5)VSSVGAR 117.71 0.0074468 12021000 1658.8 1905.4 1988.2 1196.6 1723.5 1549.4 2046.3 1573.1 1081.4 1430.8 TRUE FALSE 1517.710349 1781.358114 1853.246523 1288.762339 1654.849345 1637.125689 1909.795061 1559.346553 1193.8154 1608.058306 0.943815497 1.107769605 1.152474706 0.801440056 1.02909785 1.018076075 1.187640432 0.969707719 0.742395593 1 10.651104 -8.007984335 24.87743271 0.866149053 1.035255326 0.232555209 0.117819685 458.4879442 1428539.83 0.068407373 0.030467337 9.82E-09 8.007984335 0.169106273 S(ph)SVSSVGAR ddPTM_A459_MK2206_30min_R2 1 SSVSSVGAR 9 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67;Q8N4M4;E9PRA3;E9PRP1;E9PS62;Q9BZ68 Q9BZ67-2 FRMD8;FRMD8P1 FERM domain-containing protein 8;Putative FERM domain-containing protein FRMD8P1 1 S(0.438)S(0.256)VS(0.153)S(0.153)VGAR 93.598 0.024356 3780200 14680 15601 17454 18486 23759 22524 24947 18209 14840 21001 TRUE FALSE 15803.91209 14826.27703 18035.90765 16975.63467 22826.10228 23381.1666 21671.42893 20588.97882 16130.75638 20315.73909 0.7779147 0.729792648 0.887780039 0.835590307 1.123567407 1.150889293 1.066731013 1.013449657 0.794002931 1 14.31031023 -6.144278145 5.290902618 1.033304926 0.80256552 0.542535903 0.097683935 0.188460332 7.461468956 0.031352076 0.040918387 7.17E-07 6.144278145 -0.230739406 S(ph)SYPER ddPTM_A459_MK2206_30min_R1 2 SSYPER 6 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.809)S(0.191)YPER;S(0.943)S(0.057)YPER 107.59 0.025761 148361000 13465 13909.8 12146.8 11188 12082.9 10775 14341 12941.8 3587.4 9518.9 TRUE FALSE 12319.73104 13004.26949 11322.30906 12049.7017 11601.61251 11385.07119 13384.33806 12828.65121 3960.323068 10698.1732 1.15157334 1.215559821 1.058340415 1.126332644 1.084447998 1.064207036 1.251086313 1.199144094 0.370186853 1 13.38507684 -8.239254007 24.99909123 0.685093373 1.141734997 0.588293614 0.153498229 429.1685229 483600.6431 0.095185708 0.035917111 5.76E-09 8.239254007 0.456641624 S(ph)SYPER ddPTM_A459_MK2206_30min_R2 1 SSYPER 6 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.968)S(0.032)YPER 113.41 0.024933 28927000 44943 62229 58075 67520 54835 62497 62594 55396 45123 52079 TRUE FALSE 48383.87064 59138.79835 60011.19151 62003.40001 52681.90238 64875.36713 54375.33261 62636.4474 49047.71698 50379.6665 0.960384893 1.173862442 1.191178817 1.230722717 1.04569772 1.28772919 1.079311087 1.24328825 0.973561764 1 15.62055395 -8.278331373 24.77417474 0.98678082 1.154834244 0.328206861 0.094181641 910.8381523 1335841.01 0.084355476 0.02202534 5.27E-09 8.278331373 0.168053424 S(ph)T(ph)S(ph)Y(ph)T(ph)KIASSSRR ddPTM_A459_MK2206_30min_R2 1 STSYTKIASSSRR 13 2 Q5VZY9;O15075-2;O15075 Q5VZY9 DCLK1 Serine/threonine-protein kinase DCLK1 5 S(1)T(1)S(1)Y(1)T(1)KIASSSRR 55.064 0.0442 0 1972.2 2331.5 2019.4 2040.1 3478.7 1695.3 3815.6 1517.8 1487.8 4668.7 TRUE FALSE 2123.193148 2215.7211 2086.725788 1873.417304 3342.108759 1759.815829 3314.607137 1716.181671 1617.206155 4516.360701 0.47011151 0.490598791 0.462037009 0.414806838 0.740000407 0.389653517 0.733911075 0.379992163 0.35807728 1 12.140945 -10.7879583 3.405759146 1.001570439 0.497898987 0.578146071 0.129807488 77792315.96 117346263.6 1275126.989 0.031797227 1.63E-11 10.7879583 -0.503671452 S(ph)TAALEEDAQILK ddPTM_A459_MK2206_30min_R1 4 STAALEEDAQILK 13 0 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q15052-2;Q15052 B1ALK7 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 S(0.988)T(0.012)AALEEDAQILK;S(0.99)T(0.01)AALEEDAQILK;S(0.994)T(0.006)AALEEDAQILK;S(0.99)T(0.01)AALEEDAQILK 250.31 6.61E-23 45822300 4969.13 6723.12 5457.6 5670.24 5883.88 5601.87 4875.08 5345.91 4318.62 4430.66 TRUE FALSE 4546.4794 6285.443666 5087.153318 6106.962867 5649.5126 5919.043038 4549.872308 5299.171272 4767.556003 4979.563611 0.913027678 1.262247891 1.021606252 1.226405232 1.134539699 1.18866702 0.913709044 1.06418387 0.95742446 1 12.2818036 -7.257014783 24.89881602 0.989177999 1.131103654 0.316523968 0.100796935 414.6549099 2333422.991 0.036658553 0.027391581 5.53E-08 7.257014783 0.141925655 S(ph)TAALEEDAQILK ddPTM_A459_MK2206_30min_R2 4 STAALEEDAQILK 13 0 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q15052-2;Q15052 B1ALK7 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 S(0.975)T(0.025)AALEEDAQILK;S(0.992)T(0.008)AALEEDAQILK;S(0.959)T(0.041)AALEEDAQILK;S(0.988)T(0.012)AALEEDAQILK 218.21 1.68E-08 32402600 52161.1 70969 77595 70617 65242 63905 69333 57044 53457 53707.4 TRUE FALSE 56154.59392 67444.78266 80181.97857 64847.36521 62680.27127 66336.94956 60229.49382 64499.84666 58106.59323 51954.93194 1.080832788 1.298140141 1.543298693 1.248146476 1.206435442 1.276817178 1.159264223 1.24145763 1.118403799 1 15.66497309 -8.397736921 0.533126197 0.995987743 1.298486161 0.370350042 0.111372838 1.024865875 0.722305805 0.127604409 0.062456264 4.00E-09 8.397736921 0.302498418 S(ph)TCGDSEVEEESPGKR ddPTM_A459_MK2206_30min_R2 2 STCGDSEVEEESPGKR 16 1 O95696;O95696-2 O95696 BRD1 Bromodomain-containing protein 1 1 S(0.656)T(0.277)CGDS(0.067)EVEEESPGKR;S(0.894)T(0.106)CGDSEVEEESPGKR 118.23 0.00091314 12024500 29627 26855 24431.4 28655 29738 25686.4 28120 20800.9 23980.7 32583 TRUE FALSE 31895.2659 25521.41975 25245.93068 26313.79484 28570.3367 26663.91395 24427.81022 23519.64905 26066.49794 31519.81938 1.011911443 0.809694353 0.800954167 0.8348333 0.906424506 0.845941204 0.77499842 0.746186035 0.826987542 1 14.94397165 -7.009178878 24.08307313 0.815117256 0.864465042 0.009289642 0.084909425 817.3551614 2144537.099 0.030244952 0.025267182 9.79E-08 7.009178878 0.049347786 S(ph)TDSSSVSGSLQQETK ddPTM_A459_MK2206_30min_R1 2 STDSSSVSGSLQQETK 16 0 Q9H8G2;A0A3B3ISJ3 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 S(1)TDSSSVSGSLQQETK;S(0.96)T(0.04)DSSSVSGSLQQETK 407.18 2.53E-304 28314000 4704.4 4623.2 4703.7 3854.2 4064 3370.4 4266.8 4034.6 3887 4142.2 TRUE FALSE 4304.266076 4322.22884 4384.425949 4151.051152 3902.122274 3561.229135 3982.169557 3999.325918 4291.06756 4655.367008 0.924581471 0.928439977 0.941800279 0.891670011 0.838198636 0.7649728 0.855393259 0.859078545 0.921746353 1 12.18467919 -5.966770194 4.230785782 0.860031127 0.930644786 0.147375077 0.057568207 0.31397349 12.71868913 0.016726506 0.024747511 1.08E-06 5.966770194 0.070613659 S(ph)TDSSSVSGSLQQETK ddPTM_A459_MK2206_30min_R2 4 STDSSSVSGSLQQETK 16 0 Q9H8G2;A0A3B3ISJ3 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 S(0.553)T(0.417)DS(0.008)S(0.02)S(0.002)VSGSLQQETK;S(0.579)T(0.418)DS(0.002)SSVSGSLQQETK;S(0.817)T(0.176)DS(0.006)SSVSGSLQQETK;S(0.819)T(0.18)DS(0.001)SSVSGSLQQETK 128.82 0.00092192 84087800 124793 118752 120851 128714 118649 97180 157686 115441 96856 150188 TRUE FALSE 134347.248 112854.9484 124880.112 118197.6545 113990.2441 100878.253 136981.6388 130529.5351 105280.3598 145287.3779 0.924700067 0.776770495 0.859538618 0.813543862 0.784584633 0.694335974 0.942832342 0.898423091 0.72463528 1 17.14854985 -10.46948768 5.413940228 1.000000348 0.824356533 0.310509044 0.078512292 3.28E-07 6.38E-08 0.075516298 0.018315356 3.39E-11 10.46948768 -0.175643816 S(ph)TEFPR ddPTM_A459_MK2206_30min_R2 2 STEFPR 6 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.991)T(0.009)EFPR;S(0.981)T(0.019)EFPR 103.83 0.027136 22939000 66343 74818 72791 87272 75393 68601 79581 73060 71233 77832 TRUE FALSE 71422.27109 71102.64692 75217.81561 80141.59843 72432.692 71211.65913 69131.91911 82609.19285 77428.71758 75292.34821 0.94859933 0.944354222 0.999010091 1.064405618 0.962019298 0.945802074 0.918179878 1.097179127 1.028374322 1 16.20021563 -7.762990549 24.99999946 1.047082535 0.971642419 0.363548454 0.04395981 47.24844341 761450.9557 0.024030604 0.012510339 1.73E-08 7.762990549 -0.075440116 S(ph)TELLLGVK ddPTM_A459_MK2206_30min_R2 2 STELLLGVK 9 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 S(0.997)T(0.003)ELLLGVK;S(0.954)T(0.046)ELLLGVK 121.36 0.0062865 6791700 44301 33347 37310 34705 35632 36098 50622 41494 37158 62404 TRUE FALSE 47692.71862 31691.03647 38553.89678 31869.49048 34232.90864 37471.73469 43975.27059 46917.40827 40389.93567 60367.76259 0.790036214 0.524966226 0.638650417 0.52792234 0.567072675 0.620724259 0.728456194 0.777193095 0.669064645 1 15.88149071 -8.954757764 0.492693588 1.015953058 0.599816864 0.632889073 0.083816961 1.118315339 0.52072133 0.132377057 0.0453205 1.11E-09 8.954757764 -0.416136194 S(ph)TELVLSPDMPR ddPTM_A459_MK2206_30min_R1 3 STELVLSPDMPR 12 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 S(0.991)T(0.009)ELVLSPDMPR;S(0.994)T(0.006)ELVLSPDMPR;S(0.987)T(0.013)ELVLSPDMPR 269.93 9.82E-34 46780300 3638.52 3568.7 3530.07 2750.99 3446.05 3487.64 3689.73 3589.83 3523.52 3083.37 TRUE FALSE 3329.044767 3336.376981 3290.458684 2962.871726 3308.786531 3685.107163 3443.594844 3558.444495 3889.802513 3465.361154 0.960663152 0.96277901 0.949528357 0.85499652 0.954817228 1.063412152 0.993718891 1.026861079 1.122481133 1 11.75879 -6.664252017 5.359392512 1.039720667 0.93214995 0.588007646 0.044053253 0.156663673 7.029797687 0.015158093 0.01505892 2.17E-07 6.664252017 -0.107570717 S(ph)TELVLSPDMPR ddPTM_A459_MK2206_30min_R2 7 STELVLSPDMPR 12 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 S(0.987)T(0.013)ELVLSPDMPR;S(0.964)T(0.036)ELVLSPDMPR;S(0.95)T(0.049)ELVLSPDMPR;S(0.985)T(0.015)ELVLSPDMPR;S(0.641)T(0.359)ELVLSPDMPR;S(0.878)T(0.121)ELVLS(0.001)PDMPR;S(0.857)T(0.143)ELVLSPDMPR 197.38 0.00011085 51626800 103824.3 125167.8 105081.5 140566 115783.5 119501 129495.5 99749.6 105153.4 116949.9 TRUE FALSE 111773.1682 118952.1491 108584.8648 129081.3082 111237.258 124048.6943 112492.5853 112787.2152 114299.4527 113133.8343 0.987972952 1.0514286 0.959791254 1.140961136 0.983235994 1.096477416 0.994331943 0.996936203 1.010303004 1 16.78767093 S(ph)TENVNKLPELSSFGKPSSSVQGTGLIR ddPTM_A459_MK2206_30min_R1 2 STENVNKLPELSSFGKPSSSVQGTGLIR 28 2 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 S(0.773)T(0.227)ENVNKLPELSSFGKPSSSVQGTGLIR;S(0.714)T(0.285)ENVNKLPELS(0.001)SFGKPSSSVQGTGLIR 93.908 3.60E-06 55592000 3680.17 3844.23 3675.86 3040.72 3161.91 3355.05 3058.27 3612.24 3302.85 2656.95 TRUE FALSE 3367.152216 3593.969928 3426.352865 3274.916781 3035.964429 3545.010032 2854.258388 3580.658567 3646.193077 2986.113025 1.12760374 1.203561251 1.147429061 1.096715615 1.016694413 1.187165389 0.955844057 1.199103496 1.221049922 1 11.54405306 -5.654084511 4.328427682 1.099593488 1.167515206 0.103499408 0.085285104 0.509386886 16.7422308 0.023455876 0.041892245 2.22E-06 5.654084511 0.067921718 S(ph)TENVNKLPELSSFGKPSSSVQGTGLIR ddPTM_A459_MK2206_30min_R2 1 STENVNKLPELSSFGKPSSSVQGTGLIR 28 2 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 S(0.838)T(0.162)ENVNKLPELSSFGKPSSSVQGTGLIR 106.09 4.37E-06 0 5940.4 10373 7892.5 14194 9090.6 8535 11152 2310.3 7875.9 11999 TRUE FALSE 6395.201591 9857.891904 8155.632011 13034.3048 8733.657367 8859.805406 9687.729004 2612.264142 8560.931546 11607.47361 0.550955514 0.849271102 0.702619044 1.122923491 0.752416732 0.763284561 0.834611331 0.22505019 0.737536163 1 13.50276638 S(ph)TEPELIQVK ddPTM_A459_MK2206_30min_R1 2 STEPELIQVK 10 0 M0QXM4;Q15758-3;Q15758-2;Q15758 M0QXM4 SLC1A5 Amino acid transporter;Neutral amino acid transporter B(0) 1 S(0.999)T(0.001)EPELIQVK;S(0.99)T(0.01)EPELIQVK 169.65 0.00022878 33934000 5057.6 4601 3509.5 3345.2 4700.5 4613.3 6129.9 5374.4 7631.5 6762.6 TRUE FALSE 4627.424561 4301.474064 3271.284918 3602.847884 4513.269132 4874.501059 5720.985556 5327.412187 8424.821735 7600.401943 0.608839453 0.565953498 0.430409463 0.474033862 0.593819796 0.641347799 0.752721448 0.700938217 1.108470552 1 12.89186 -7.800803542 0.911522377 1.04945727 0.525685547 0.830076225 0.084764416 0.223819936 0.341121854 0.076829813 0.031878522 1.58E-08 7.800803542 -0.523771723 S(ph)TEPELIQVK ddPTM_A459_MK2206_30min_R2 4 STEPELIQVK 10 0 M0QXM4;Q15758-3;Q15758-2;Q15758 M0QXM4 SLC1A5 Amino acid transporter;Neutral amino acid transporter B(0) 1 S(0.988)T(0.012)EPELIQVK;S(0.989)T(0.011)EPELIQVK;S(0.994)T(0.006)EPELIQVK;S(0.967)T(0.033)EPELIQVK 176.32 6.69E-05 27831900 206465 101315 106041 126338 105211 131715 205013 92904 173711 163450 TRUE FALSE 222272.1191 96283.84443 109576.354 116015.7813 101079.8875 136727.5066 178094.5468 105046.8718 188820.0688 158116.6399 1.405747803 0.608941883 0.693009629 0.733735433 0.639274194 0.864725602 1.126349175 0.664363168 1.194182149 1 17.27062968 -7.006219562 24.49164497 0.972151542 0.789090675 0.098062766 0.248202351 509.5855999 2006673.443 0.086857536 0.074015892 9.86E-08 7.006219562 -0.183060867 S(ph)TEPSVTPDLLNFK ddPTM_A459_MK2206_30min_R1 4 STEPSVTPDLLNFK 14 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.988)T(0.012)EPSVTPDLLNFK;S(0.988)T(0.012)EPSVTPDLLNFK;S(0.992)T(0.008)EPSVTPDLLNFK;S(0.957)T(0.043)EPSVTPDLLNFK 241.76 1.16E-19 32438600 6852.07 8322.74 6952.72 6278.02 7443.48 7086.63 7044.73 7166.45 7305.1 7060.1 TRUE FALSE 6269.265465 7780.928113 6480.788738 6761.554188 7146.99043 7487.868866 6574.788916 7103.794483 8064.491287 7934.758489 0.790101611 0.980613099 0.81675942 0.852143666 0.90071934 0.943679493 0.828606053 0.895275451 1.016349937 1 12.9539706 -8.218492622 4.933343015 1.009248336 0.877384132 0.482355801 0.054935902 0.156655579 9.088192172 0.039766239 0.013452187 6.05E-09 8.218492622 -0.131864204 S(ph)TEPSVTPDLLNFK ddPTM_A459_MK2206_30min_R2 1 STEPSVTPDLLNFK 14 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.81)T(0.184)EPS(0.006)VT(0.001)PDLLNFK 84.734 0.025495 7891100 9692.9 9787 8293.3 9223.7 10359 9558.9 12043 9520.9 8725.4 11025 TRUE FALSE 10434.99588 9300.991812 8569.794483 8470.094205 9952.25361 9922.670638 10461.73963 10765.31432 9484.31952 10665.25515 0.978410336 0.872083385 0.803524563 0.794176425 0.933147259 0.930373488 0.980917895 1.009381788 0.889272632 1 13.38063086 -6.461353276 5.404418919 0.960876214 0.858353303 0.409669721 0.056681167 0.22366845 13.3032385 0.018803146 0.021041247 3.46E-07 6.461353276 -0.102522911 S(ph)TEPSVTPDLLNFKK ddPTM_A459_MK2206_30min_R1 1 STEPSVTPDLLNFKK 15 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.793)T(0.2)EPS(0.006)VT(0.001)PDLLNFKK 77.13 0.018207 6695200 2919.3 2351.1 2493.5 2854 2855 2305.8 2282 2934.6 2051.2 1649.5 TRUE FALSE 2670.998205 2198.042963 2324.248167 3073.815575 2741.279304 2436.352403 2129.771944 2908.943102 2264.42958 1853.852513 1.440782471 1.185662261 1.253739524 1.658069104 1.478693308 1.314210481 1.148835697 1.56913405 1.221472347 1 10.85631076 -6.985386847 22.22048443 1.275036205 1.397060846 0.149252176 0.179684508 168.6599106 256456.112 0.065304908 0.057552244 1.03E-07 6.985386847 0.122024641 S(ph)TEPSVTPDLLNFKK ddPTM_A459_MK2206_30min_R2 1 STEPSVTPDLLNFKK 15 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.724)T(0.275)EPS(0.001)VTPDLLNFKK 94.922 0.0057257 2278400 9901.5 19406 16809 18969 20050 15460 19816 14573 18074 16532 TRUE FALSE 10659.56645 18442.32626 17369.40367 17419.17202 19262.73626 16048.34113 17214.1354 16477.74114 19646.04385 15992.56219 0.66653275 1.153181462 1.086092614 1.089204582 1.204480935 1.003487805 1.076383833 1.030337787 1.228448801 1 13.96511347 -4.756881206 24.99977786 1.097026294 0.666532106 0.751221427 0.074289677 64.87489833 355769.4935 0.017529901 0.136920705 1.75E-05 4.756881206 -0.430494189 S(ph)TFGSGPPTSR ddPTM_A459_MK2206_30min_R2 1 STFGSGPPTSR 11 0 E9PRZ5 E9PRZ5 GPR89A 1 S(0.987)T(0.013)FGSGPPTSR 94.363 0.022296 26046000 14571 13475 13857 15089 10549 13717 15024 11688 9860.3 16625 TRUE FALSE 15686.56696 12805.85109 14318.98546 13856.18043 10134.79326 14239.01005 13051.33075 13215.66173 10717.93107 16082.52761 0.975379452 0.796258611 0.890344218 0.861567334 0.630174155 0.885371404 0.811522359 0.821740341 0.666433245 1 13.97320655 -1.80040095 1.138019774 0.806667165 199.9967201 0.15765582 0.102948898 3653.816244 5.125563326 0.031268945 1899503.743 0.015834307 1.80040095 199.1900529 S(ph)TFSTNYR ddPTM_A459_MK2206_30min_R1 4 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.759)T(0.096)FS(0.028)T(0.117)NYR;S(0.958)T(0.021)FS(0.006)T(0.015)NYR;S(0.964)T(0.01)FS(0.023)T(0.003)NYR;S(0.865)T(0.016)FS(0.025)T(0.093)NYR 112.36 0.011207 2117577000 6438.8 6388.3 6450.5 6673.97 7315.6 5786.6 7010.2 6554.1 5098.45 4781.43 TRUE FALSE 5891.146249 5972.420509 6012.658032 7188.000326 7024.204161 6114.232291 6542.562349 6496.798195 5628.452122 5373.789646 1.09627407 1.111398269 1.118886006 1.337603591 1.307123022 1.137787798 1.21749506 1.208978881 1.047389737 1 12.39172413 -8.359500893 3.821316283 1.003736926 1.19471589 0.435019532 0.077296583 0.234764198 5.847150964 0.081041927 0.021603033 4.37E-09 8.359500893 0.190978964 S(ph)TFSTNYR ddPTM_A459_MK2206_30min_R2 3 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.812)T(0.016)FS(0.115)T(0.057)NYR;S(0.96)T(0.019)FS(0.014)T(0.007)NYR;S(0.896)T(0.014)FS(0.064)T(0.025)NYR 113.44 0.010744 1081410000 141972 191979 258922 205148 179775 200506 238937 96461 202041 126045 TRUE FALSE 152841.4855 182445.602 267554.3303 188386.7522 172716.1302 208136.3963 207564.2849 109068.7839 219614.161 121932.162 1.253496067 1.496287764 2.194288414 1.54501281 1.416493626 1.706985204 1.702293157 0.894503814 1.801117584 1 16.89571919 -9.027503149 0.430748263 0.963748843 1.638806634 0.199714577 0.327822488 3.523192024 1.226444255 0.687647533 0.217226852 9.39E-10 9.027503149 0.675057791 S(ph)TGGAPTFNVTVTK ddPTM_A459_MK2206_30min_R1 1 STGGAPTFNVTVTK 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 1 S(0.989)T(0.01)GGAPT(0.001)FNVTVTK 120.21 0.0021004 24068000 2143.6 2426.8 2619.3 1909.8 2653.4 2749.8 2918.1 2661.4 1903 1954 TRUE FALSE 1961.275564 2268.814879 2441.509214 2056.893127 2547.709459 2905.4913 2723.438873 2638.13166 2100.82366 2196.076272 0.893081715 1.033122077 1.111759753 0.936621898 1.160118841 1.323037518 1.240138564 1.201293277 0.956626 1 11.10071245 -4.883406662 0.74591386 1.155127921 0.796630642 0.248353239 0.118193429 3.476027877 1.621406007 0.051833846 1.021798699 1.31E-05 4.883406662 -0.358497279 S(ph)TGGAPTFNVTVTK ddPTM_A459_MK2206_30min_R2 1 STGGAPTFNVTVTK 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 1 S(0.74)T(0.26)GGAPTFNVTVTK 104.94 0.0096875 0 28654 28534 23286 28198 21204 24999 28815 19985 20600 24393 TRUE FALSE 30847.77227 27117.04305 24062.34362 25894.1332 20371.42442 25950.35446 25031.55589 22597.10812 22391.75076 23597.05841 1.307271938 1.149170485 1.019717933 1.097345811 0.863303555 1.099728365 1.060791369 0.957623943 0.948921276 1 14.52631941 -4.410903253 0.974602731 0.998385144 1.710721933 0.672606553 0.067186068 2.185032193 1.018050941 0.022064396 1.942463032 3.88E-05 4.410903253 0.71233679 S(ph)TGSMSVVSAALVAEPVQNGSR ddPTM_A459_MK2206_30min_R1 1 STGSMSVVSAALVAEPVQNGSR 22 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.814)T(0.177)GS(0.009)MSVVSAALVAEPVQNGSR 178.22 6.68E-16 0 143.03 0 189.8 68.466 129.31 262.09 225.38 147.1 70.961 224.12 TRUE FALSE 130.8645474 0 176.9169048 73.73926318 124.1593089 276.9293093 210.3453114 145.8139202 78.33764989 251.8856776 0.519539454 0 0.702369847 0.292748932 0.492919288 1.099424596 0.83508246 0.578889287 0.311004781 1 7.976625282 -6.536649921 24.97872166 0.748862235 0.377000758 0.329785012 0.262567761 292.2973632 530177.2678 0.087745685 0.087785444 2.91E-07 6.536649921 -0.371861477 S(ph)TLEPVEK ddPTM_A459_MK2206_30min_R1 2 STLEPVEK 8 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;P17066;P48741 A0A0G2JIW1;P17066 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 1 S(0.991)T(0.009)LEPVEK;S(0.981)T(0.019)LEPVEK 98.048 0.019775 11684600 5138.3 5041.2 5001.8 4169 4890.2 4676.8 5153.6 5409.3 5480.9 3669.5 TRUE FALSE 4701.260603 4713.016964 4662.291752 4490.097102 4695.412979 4941.596374 4809.812747 5362.00706 6050.659169 4124.105363 1.139946774 1.142797419 1.13049773 1.088744517 1.13852886 1.19822263 1.166268154 1.300162481 1.467144662 1 12.00986548 -7.681812341 4.277399619 1.287857153 1.140512898 0.163625484 0.110208594 0.28703063 9.8122245 0.053497362 0.028792353 2.08E-08 7.681812341 -0.147344256 S(ph)TLTDSLVCK ddPTM_A459_MK2206_30min_R1 1 STLTDSLVCK 10 0 P13639 P13639 EEF2 Elongation factor 2 1 S(0.929)T(0.071)LTDSLVCK 100.55 0.013754 0 816.23 1037.6 1185.4 667.15 881.4 731.25 1098.3 852.39 722.72 849.66 TRUE FALSE 746.8053523 970.0520514 1104.938351 718.5340086 846.2919716 772.6527431 1025.034411 844.9376441 797.8493303 954.9222954 0.782058766 1.015843966 1.157097657 0.752452856 0.886241714 0.809126299 1.073421802 0.884823454 0.835512307 1 9.899239532 -5.772786186 24.99995908 0.890764563 0.988084561 0.111199805 0.120823119 470.1852944 1035940.08 0.034277993 0.051351727 1.69E-06 5.772786186 0.097319997 S(ph)TNTAVSR ddPTM_A459_MK2206_30min_R2 4 STNTAVSR 8 0 Q9NWB6-2;Q9NWB6 Q9NWB6-2 ARGLU1 Arginine and glutamate-rich protein 1 1 S(0.956)T(0.044)NTAVSR;S(0.947)T(0.052)NT(0.001)AVSR;S(0.987)T(0.013)NTAVSR;S(0.958)T(0.042)NTAVSR 141.89 0.0022498 112110000 53206.2 19241.8 29946 27281.8 36410 26648.8 34848.9 82631.4 45196 56847.1 TRUE FALSE 57279.70758 18286.28019 30944.38469 25052.78967 34980.36045 27662.93876 30273.19757 93431.6077 49127.06638 54992.18378 1.041597253 0.332525078 0.562705144 0.455570009 0.636096951 0.503034011 0.550500007 1.698997953 0.893346345 1 15.74693896 -7.731104752 24.99275992 1.222129113 0.566769568 0.534590296 0.262047796 127.8430532 105330.2071 0.113891646 0.065745092 1.86E-08 7.731104752 -0.655359545 S(ph)TPAMMNGQGSTTSSSK ddPTM_A459_MK2206_30min_R2 1 STPAMMNGQGSTTSSSK 17 0 Q6ZN18-2;Q6ZN18;F5GZR7;A0A669KBC9;A0A669KBL4;G5EA50;Q6ZN18-3 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 S(0.5)T(0.5)PAMMNGQGSTTSSSK 98 0.0053656 3184200 22254 19977 26093 24839 25875 20534 30720 21490 22329 27833 TRUE FALSE 23957.78335 18984.97123 26962.9276 22809.57424 24859.01749 21315.43576 26686.4271 24298.81679 24271.13606 26924.81149 0.889803197 0.705110646 1.00141565 0.847158178 0.923275452 0.791665181 0.991146293 0.902469337 0.901441262 1 14.71664862 -1.52288718 0.036657079 1.338066853 0.191440971 0.214012135 0.080056312 1364.559958 3.832930921 34.5958145 101.6840728 0.029999417 1.52288718 -1.146625883 S(ph)TPEHTWSSR ddPTM_A459_MK2206_30min_R1 2 STPEHTWSSR 10 0 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(0.858)T(0.142)PEHTWSSR;S(0.499)T(0.499)PEHT(0.001)WS(0.002)SR 131.42 0.0026131 20706800 6558.9 4354.5 5282.8 3860.6 6765.5 6084.2 7007.5 5486.7 4479.7 4271.6 TRUE FALSE 6001.031113 4071.021259 4924.218255 4157.944081 6496.015809 6428.682146 6540.042461 5438.73036 4945.380846 4800.798057 1.250006987 0.847988441 1.025708267 0.866094352 1.353111656 1.339086141 1.36228235 1.13288047 1.030116407 1 12.22905854 -6.260542348 24.99921125 1.224334001 0.988792204 0.28242184 0.158008831 97.13495312 2707033.746 0.048205911 0.058684891 5.49E-07 6.260542348 -0.235541797 S(ph)TPEHTWSSR ddPTM_A459_MK2206_30min_R2 3 STPEHTWSSR 10 0 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(0.909)T(0.09)PEHTWSSR;S(0.991)T(0.009)PEHTWSSR;S(0.903)T(0.097)PEHTWSSR 117.14 0.0061178 42693700 73220 104537 81917 127701 113840 120182 118179 97159 96130 98551 TRUE FALSE 78825.7795 99345.84459 84648.07189 117267.4198 109370.0696 124755.6102 102661.9553 109858.0149 104491.2136 95335.28894 0.82682688 1.042067903 0.887898624 1.230052598 1.147214959 1.308598438 1.076851568 1.152333161 1.096039198 1 16.54072271 -5.756469744 24.99999093 1.154927834 0.931244773 0.545512774 0.093784231 90.48257605 455169.8422 0.024637268 0.041028296 1.75E-06 5.756469744 -0.223683061 S(ph)TPKEDDSSASTSQSTR ddPTM_A459_MK2206_30min_R1 2 STPKEDDSSASTSQSTR 17 1 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.909)T(0.091)PKEDDSSASTSQSTR;S(0.5)T(0.5)PKEDDSSASTSQSTR 182.28 3.33E-07 13610300 3516.7 3415.3 4102.2 3301.8 2886.3 1925.4 2750.8 3085.6 2806.8 2547.45 TRUE FALSE 3217.586198 3192.963349 3823.754093 3556.105208 2771.332559 2034.414484 2567.299151 3058.622925 3098.576904 2863.047338 1.123832692 1.115232468 1.335553919 1.24207 0.967966028 0.710576614 0.896701608 1.068310287 1.082265341 1 11.48333581 -6.293636345 6.993616771 0.941864976 1.207268157 0.537387166 0.113256223 0.17962276 30.76733355 0.039023194 0.045001427 5.09E-07 6.293636345 0.265403181 S(ph)TPKEDDSSASTSQSTR ddPTM_A459_MK2206_30min_R2 2 STPKEDDSSASTSQSTR 17 1 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.478)T(0.478)PKEDDS(0.004)S(0.004)AS(0.007)T(0.009)S(0.009)QS(0.009)TR;S(0.824)T(0.172)PKEDDS(0.001)SASTSQSTR 54.117 0.045867 21428000 45340 57581 67225 53688 58079 41023 71634 48901 49001 68269 TRUE FALSE 48811.26526 54721.61127 69466.24795 49301.51866 55798.52664 42584.15901 62228.36975 55292.5286 53263.01841 66041.38812 0.73910114 0.828595716 1.051859295 0.746524567 0.84490239 0.644810175 0.942263201 0.837240557 0.806509674 1 16.01108282 -10.87313425 3.401545456 1.001044509 0.830047531 0.193332713 0.105915801 73873867.62 114483748.1 784802.7443 0.026999434 1.34E-11 10.87313425 -0.170996979 S(ph)TPLEENVVDR ddPTM_A459_MK2206_30min_R1 1 STPLEENVVDR 11 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 S(0.893)T(0.107)PLEENVVDR 101.35 0.015361 4920800 2501 2749.9 2524.1 2550.5 2435.5 1987.8 2455.5 2200.2 2131.5 2546.7 TRUE FALSE 2288.276817 2570.88101 2352.771125 2746.939952 2338.488878 2100.347518 2291.698075 2180.963883 2353.077053 2862.204423 0.799480568 0.898217119 0.822013657 0.959728778 0.817023711 0.733821631 0.800675891 0.761987462 0.822120542 1 11.482911 -6.497870056 24.47799332 0.803851395 0.870956482 0.052565844 0.078487417 1111.772721 1088181.371 0.022891478 0.025829155 3.18E-07 6.497870056 0.067105087 S(ph)TPLEENVVDREQIDFLAAR ddPTM_A459_MK2206_30min_R1 2 STPLEENVVDREQIDFLAAR 20 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 S(0.5)T(0.5)PLEENVVDREQIDFLAAR;S(0.772)T(0.228)PLEENVVDREQIDFLAAR 86.761 0.0012231 8554800 842.22 908.97 997.07 1007.77 1276.07 1097.42 1154.23 1084.07 759.83 508.74 TRUE FALSE 770.5847663 849.7958878 929.3916664 1085.38862 1225.24143 1159.554972 1077.233423 1074.59209 838.8170476 571.766552 1.347726207 1.486263729 1.625474004 1.898307301 2.142905047 2.028021695 1.884044142 1.879424542 1.467062116 1 9.159282415 -5.390202493 2.372111952 1.82433597 1.393820943 0.133259314 0.311978797 0.470797921 5.051592689 0.084944253 0.237880765 4.07E-06 5.390202493 -0.430515027 S(ph)TPLSQPSANGVQTEGLDYDR ddPTM_A459_MK2206_30min_R1 4 STPLSQPSANGVQTEGLDYDR 21 0 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6 ENAH Protein enabled homolog 1 S(0.871)T(0.128)PLSQPSANGVQTEGLDYDR;S(0.865)T(0.135)PLSQPSANGVQTEGLDYDR;S(0.828)T(0.172)PLSQPSANGVQTEGLDYDR;S(0.855)T(0.144)PLS(0.001)QPSANGVQTEGLDYDR 317.85 3.38E-136 70949800 2634.09 3210.5 3701.55 3194.07 3537.1 2783.29 2974.37 3246.64 2272.94 2287.32 TRUE FALSE 2410.046813 3001.495866 3450.299099 3440.077825 3396.209817 2940.877475 2775.955204 3218.254969 2509.220247 2570.69047 0.93750953 1.167583535 1.342168238 1.338192157 1.321127478 1.144002947 1.079848094 1.251902944 0.97608805 1 11.32794019 -6.973201974 11.11361833 1.099929883 1.231696936 0.203943947 0.130775316 1.027551739 419.7554317 0.048532508 0.042671372 1.06E-07 6.973201974 0.131767053 S(ph)TPLSQPSANGVQTEGLDYDR ddPTM_A459_MK2206_30min_R2 5 STPLSQPSANGVQTEGLDYDR 21 0 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6 ENAH Protein enabled homolog 1 S(0.727)T(0.203)PLS(0.021)QPS(0.043)ANGVQT(0.006)EGLDYDR;S(0.828)T(0.172)PLSQPSANGVQTEGLDYDR;S(0.843)T(0.157)PLSQPSANGVQTEGLDYDR;S(0.488)T(0.488)PLS(0.024)QPSANGVQTEGLDYDR;S(0.822)T(0.177)PLS(0.001)QPSANGVQTEGLDYDR 205.36 2.19E-17 117602700 74765.1 101206 106560.3 110319.9 108765.2 113008.7 98288.4 73979 96854.9 86932.8 TRUE FALSE 80489.17354 96180.25721 110112.9672 101306.4113 104494.5317 117309.3253 85383.01501 83648.30931 105279.1641 84096.18986 0.957108445 1.143693399 1.309369276 1.204649241 1.242559644 1.394942214 1.015301825 0.994674187 1.251889822 1 16.35975282 -10.62585402 4.464546376 0.99998299 1.171992763 0.121095792 0.135638669 2.40E-05 4.83E-06 0.137472134 0.033338594 2.37E-11 10.62585402 0.172009773 S(ph)TPPPNNLVNPVQELETER ddPTM_A459_MK2206_30min_R1 3 STPPPNNLVNPVQELETER 19 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.5)T(0.5)PPPNNLVNPVQELETER;S(0.847)T(0.153)PPPNNLVNPVQELETER;S(0.852)T(0.148)PPPNNLVNPVQELETER 146.88 4.39E-05 28872200 6321.6 6092.7 5781.8 4696.9 5475.8 4487.6 5914.8 6314.7 5481.6 5216 TRUE FALSE 5783.914724 5696.064123 5389.347525 5058.656052 5257.687291 4741.684034 5520.234484 6259.491244 6051.431936 5862.197459 0.986646179 0.971660229 0.919339132 0.862928294 0.896879938 0.808857782 0.941666418 1.06777216 1.032280468 1 12.51722585 -7.631693156 5.235692621 1.036264634 0.906170697 0.558200734 0.049860745 0.163409 6.866257168 0.026596692 0.014954873 2.34E-08 7.631693156 -0.130093936 S(ph)TPPPNNLVNPVQELETER ddPTM_A459_MK2206_30min_R2 3 STPPPNNLVNPVQELETER 19 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.818)T(0.182)PPPNNLVNPVQELETER;S(0.795)T(0.205)PPPNNLVNPVQELETER;S(0.5)T(0.5)PPPNNLVNPVQELETER 114.21 0.00049866 33057700 153186 168644 128144 149095 147752 145488 176585 137902 131859 169917 TRUE FALSE 164914.0379 160269.3842 132416.257 136913.4616 141950.5141 151024.6478 153399.1774 155926.2649 143327.8575 164372.6222 1.003293832 0.975036974 0.80558584 0.832945656 0.863589764 0.918794418 0.933240435 0.948614573 0.871969161 1 17.3266105 -6.971469091 9.567884722 0.933027652 0.891828703 0.087603188 0.062854701 0.954710346 303.9029264 0.024171137 0.021217619 1.07E-07 6.971469091 -0.041198949 S(ph)TPPPNNLVNPVQELETERR ddPTM_A459_MK2206_30min_R1 2 STPPPNNLVNPVQELETERR 20 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.726)T(0.274)PPPNNLVNPVQELETERR;S(0.768)T(0.232)PPPNNLVNPVQELETERR 94.463 0.00057122 31010000 1436.7 1917.42 1465.78 1244.71 1444.51 1277.95 1561.41 1830.38 1406.77 1287.17 TRUE FALSE 1314.501121 1792.595609 1366.286937 1340.57778 1386.972108 1350.306425 1457.251188 1814.377181 1553.008776 1446.634337 0.908661634 1.239149081 0.944459082 0.926687377 0.958757906 0.933412397 1.007339001 1.254205803 1.073532361 1 10.49848459 -7.556017023 24.51647596 1.124476151 0.989299436 0.210305703 0.106692895 221.4748405 163849.4605 0.050066104 0.028905924 2.78E-08 7.556017023 -0.135176715 S(ph)TPPPNNLVNPVQELETERR ddPTM_A459_MK2206_30min_R2 4 STPPPNNLVNPVQELETERR 20 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.874)T(0.126)PPPNNLVNPVQELETERR;S(0.964)T(0.036)PPPNNLVNPVQELETERR;S(0.938)T(0.062)PPPNNLVNPVQELETERR;S(0.5)T(0.5)PPPNNLVNPVQELETERR 119.18 0.00013123 33111900 46532.4 67513.2 58825.5 65754.7 67349.3 59681.4 72012.7 53105.4 60472.7 60924.9 TRUE FALSE 50094.95632 64160.59266 60786.71281 60382.33067 64704.82808 61952.6175 62557.34599 60046.45812 65732.50614 58936.9255 0.849975731 1.088631484 1.031385881 1.024524611 1.097865685 1.051168125 1.06142873 1.018825763 1.115302598 1 15.84688418 -4.755641098 24.99975115 1.054768674 0.849975401 0.750766904 0.035325187 86.28358114 371980.9363 0.008172046 0.070963133 1.76E-05 4.755641098 -0.204793273 S(ph)TPPYLFPEYPEASK ddPTM_A459_MK2206_30min_R1 2 STPPYLFPEYPEASK 15 0 Q8TE76-2;Q8TE76-3;Q8TE76 Q8TE76-2 MORC4 MORC family CW-type zinc finger protein 4 1 S(0.493)T(0.493)PPY(0.013)LFPEYPEASK;S(0.599)T(0.401)PPYLFPEYPEASK 130.47 0.00079442 21526200 6349.8 7645.8 6260.2 4898.4 5198.2 4602.1 6606.6 5412.1 7160 6923.5 TRUE FALSE 5809.716166 7148.05703 5835.275066 5275.675617 4991.144687 4862.666925 6165.885768 5364.78258 7904.307622 7781.23545 0.746631586 0.918627521 0.74991627 0.677999741 0.641433448 0.624922219 0.792404472 0.689451259 1.015816534 1 12.92578352 -8.265688769 24.93898135 1.007908319 0.730982105 0.660229624 0.079694172 242.7598647 1424688.263 0.075340563 0.022144924 5.42E-09 8.265688769 -0.276926214 S(ph)TPPYLFPEYPEASK ddPTM_A459_MK2206_30min_R2 2 STPPYLFPEYPEASK 15 0 Q8TE76-2;Q8TE76-3;Q8TE76 Q8TE76-2 MORC4 MORC family CW-type zinc finger protein 4 1 S(0.968)T(0.032)PPYLFPEYPEASK;S(0.732)T(0.267)PPYLFPEYPEASK 89.624 0.016404 18124800 41907 42013 40074 50152 37741 30065 41605 37798 32533 46404 TRUE FALSE 45115.43214 39926.69551 41410.04716 46054.42117 36259.09871 31209.14464 36142.21352 42738.32838 35362.66153 44889.84128 1.005025432 0.889437217 0.922481479 1.025943061 0.807735061 0.695238472 0.805131239 0.952071274 0.78776535 1 15.45410137 -6.276866673 24.80019801 0.829813253 0.952898592 0.298693566 0.088255795 917.0005169 1474124.026 0.027715721 0.031537585 5.29E-07 6.276866673 0.123085339 S(ph)TPQPPSGK ddPTM_A459_MK2206_30min_R1 2 STPQPPSGK 9 0 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 S(0.893)T(0.107)PQPPSGK;S(0.91)T(0.09)PQPPSGK 97.635 0.020416 27561000 16842.4 16054.9 16728 12706 11746.2 10304.3 13335.2 9690.1 9176.9 12146 TRUE FALSE 15409.86544 15009.72309 15592.54997 13684.61832 11278.32398 10887.72056 12445.63314 9605.380477 10130.87159 13650.73818 1.128866823 1.099553951 1.142249581 1.002481928 0.826206161 0.797592073 0.911718691 0.703652825 0.742148261 1 13.73669135 -6.094729244 2.546292883 0.815666122 1.121327052 0.734759458 0.079513379 0.14019654 1.781846951 0.024732654 0.035039941 8.04E-07 6.094729244 0.30566093 S(ph)TPQPPSGK ddPTM_A459_MK2206_30min_R2 1 STPQPPSGK 9 0 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 S(0.5)T(0.5)PQPPSGK 110.54 0.010792 20064000 109120 91382 86278 80176 78957 61697 66915 52967 61181 55730 TRUE FALSE 117474.3111 86844.10276 89154.46546 73625.36433 75856.75145 64044.92257 58128.98012 59889.96876 66502.41279 53911.53466 2.179019978 1.610863117 1.653717818 1.365669977 1.407059768 1.187963262 1.078229 1.110893413 1.233547017 1 15.71830636 -1.522878745 0.33040622 1.053491896 12.14034085 0.917070906 0.096963401 14.8367922 0.211178073 0.086046442 100.488743 0.03 1.522878745 11.08684895 up S(ph)TPSSSTPSSR ddPTM_A459_MK2206_30min_R2 3 STPSSSTPSSR 11 0 H3BUV9;Q96S82 H3BUV9 UBL7 Ubiquitin-like protein 7 1 S(0.5)T(0.5)PSSSTPSSR;S(0.918)T(0.082)PSSSTPSSR;S(0.917)T(0.083)PSSSTPSSR 147.28 0.00066928 4895600 53036 40405 46899 48553 44486 44165 51293 40947 37927 51375 TRUE FALSE 57096.47694 38398.54645 48462.58925 44586.06459 42739.25612 45845.73002 44558.16749 46298.91349 41225.8219 49698.63796 1.148853958 0.772627743 0.975129123 0.897128501 0.859968359 0.922474577 0.896567176 0.931593206 0.829516132 1 15.60091869 -4.742347172 24.99862348 0.898058615 1.148854792 0.585800707 0.063196181 876.1252315 1147106.18 0.014325045 0.518779668 1.81E-05 4.742347172 0.250796177 S(ph)TQGVTLTDLQEAEK ddPTM_A459_MK2206_30min_R2 1 STQGVTLTDLQEAEK 15 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.896)T(0.104)QGVTLTDLQEAEK 159.8 8.43E-05 0 9545.2 14279 9404.7 12506 11546 9109.4 11367 10151 11303 7942.8 TRUE FALSE 10275.98785 13569.92562 9718.248004 11484.2198 11092.64603 9456.0646 9874.499246 11477.77055 12286.11451 7683.627086 1.337387634 1.766083319 1.26479954 1.494635238 1.443673138 1.230677191 1.28513515 1.493795889 1.598999323 1 12.90757179 -5.285494366 24.95838666 1.370823684 1.551735619 0.146836134 0.18853317 1319.873261 1369439.88 0.047472819 0.098903673 5.18E-06 5.285494366 0.180911935 S(ph)TSATDTHHVEMAR ddPTM_A459_MK2206_30min_R1 5 STSATDTHHVEMAR 14 0 H3BQP2;H3BNP3;H3BTL2;H3BS02;O14874-2;O14874-3;O14874 H3BQP2 BCKDK "[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial" 1 S(0.643)T(0.138)S(0.095)AT(0.121)DT(0.003)HHVEMAR;S(0.853)T(0.146)S(0.001)ATDTHHVEMAR;S(0.963)T(0.034)S(0.003)ATDTHHVEMAR;S(0.863)T(0.131)S(0.007)ATDTHHVEMAR;S(0.974)T(0.021)S(0.004)ATDTHHVEMAR 188.9 6.27E-05 68902300 7294.12 6366.23 6951.93 6609.25 8095.5 7506.87 8065.04 7526.82 5777.52 5400.8 TRUE FALSE 6673.716791 5951.78727 6480.052361 7118.29558 7773.039092 7931.902492 7527.035897 7461.013806 6378.113879 6069.891878 1.099478693 0.980542552 1.067572947 1.172721973 1.280589383 1.306761743 1.240060951 1.229183972 1.050778829 1 12.5674551 -5.766621644 3.532134823 1.206304478 1.037284368 0.276698251 0.09562024 0.244281652 6.445203989 0.027145119 0.046043287 1.71E-06 5.766621644 -0.169020109 S(ph)TSATDTHHVEMAR ddPTM_A459_MK2206_30min_R2 1 STSATDTHHVEMAR 14 0 H3BQP2;H3BNP3;H3BTL2;H3BS02;O14874-2;O14874-3;O14874 H3BQP2 BCKDK "[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial" 1 S(0.447)T(0.276)S(0.276)AT(0.002)DTHHVEMAR 95.751 0.0064002 8761400 10528 13095 12022 13394 7722.6 14218 12776 7364.8 17809 10573 TRUE FALSE 11334.03177 12444.72134 12422.80748 12299.66735 7419.371921 14759.07595 11098.49585 8327.404647 19357.99463 10228.00388 1.108137219 1.216730214 1.214587678 1.202548171 0.72539784 1.443006488 1.085108687 0.814176915 1.892646392 1 13.32023699 -8.244746939 24.99843621 1.446323397 1.110548642 0.196508383 0.278627009 1112.4602 1666016.262 0.177441331 0.066648143 5.69E-09 8.244746939 -0.335774755 S(ph)TSFRGGMGSGGLATGIAGGLAGMGGIQNEK ddPTM_A459_MK2206_30min_R1 6 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.328)T(0.328)S(0.328)FRGGMGS(0.015)GGLAT(0.002)GIAGGLAGMGGIQNEK;S(0.272)T(0.272)S(0.272)FRGGMGS(0.064)GGLAT(0.119)GIAGGLAGMGGIQNEK;S(0.327)T(0.327)S(0.327)FRGGMGS(0.018)GGLATGIAGGLAGMGGIQNEK;S(0.43)T(0.121)S(0.43)FRGGMGS(0.002)GGLAT(0.017)GIAGGLAGMGGIQNEK;S(0.328)T(0.328)S(0.328)FRGGMGS(0.014)GGLAT(0.002)GIAGGLAGMGGIQNEK;S(0.621)T(0.207)S(0.172)FRGGMGSGGLATGIAGGLAGMGGIQNEK 110.2 1.38E-11 1241925600 17740.85 14153.46 19246.93 16088.84 18223.35 13631.19 12358.27 16118.66 9990.61 5154.82 TRUE FALSE 16231.89755 13232.06718 17940.50202 17328.00524 17497.47538 14402.9762 11533.87236 15977.73625 11029.16966 5793.438019 2.801772884 2.283974928 3.096693528 2.990971024 3.020223108 2.486084455 1.990851084 2.757902338 1.903734816 1 12.50020403 -8.816935524 0.532328719 0.938094056 2.816927113 0.740367838 0.31789564 0.74582401 0.439619417 0.430345399 0.166552047 1.52E-09 8.816935524 1.878833057 S(ph)TSFRGGMGSGGLATGIAGGLAGMGGIQNEK ddPTM_A459_MK2206_30min_R2 8 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.33)T(0.33)S(0.33)FRGGMGS(0.005)GGLAT(0.006)GIAGGLAGMGGIQNEK;S(0.323)T(0.323)S(0.323)FRGGMGS(0.03)GGLAT(0.001)GIAGGLAGMGGIQNEK;S(0.245)T(0.245)S(0.245)FRGGMGS(0.204)GGLAT(0.062)GIAGGLAGMGGIQNEK;S(0.322)T(0.322)S(0.322)FRGGMGS(0.03)GGLAT(0.004)GIAGGLAGMGGIQNEK;S(0.32)T(0.32)S(0.32)FRGGMGS(0.033)GGLAT(0.008)GIAGGLAGMGGIQNEK;S(0.35)T(0.35)S(0.298)FRGGMGS(0.002)GGLATGIAGGLAGMGGIQNEK;S(0.39)T(0.123)S(0.39)FRGGMGS(0.015)GGLAT(0.082)GIAGGLAGMGGIQNEK;S(0.332)T(0.332)S(0.332)FRGGMGS(0.003)GGLAT(0.001)GIAGGLAGMGGIQNEK 76.804 1.47E-05 310835200 72659 250445.9 140691.4 191166.7 257244.6 232881.6 245368.1 163203.3 309625.5 132596.7 TRUE FALSE 78221.82891 238009.1208 145381.9811 175547.7691 247143.8845 241744.0725 213150.9737 184534.5317 336556.1663 128270.0805 0.609821313 1.855531078 1.133405237 1.368579238 1.926746155 1.884648949 1.661735713 1.438640491 2.623808802 1 16.96882517 -6.141293033 5.006844566 1.778152051 1.263976743 0.218601469 0.477516571 0.362472295 13.36550763 0.134604975 0.176091027 7.22E-07 6.141293033 -0.514175308 S(ph)TSFRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR ddPTM_A459_MK2206_30min_R1 2 STSFRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR 40 2 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.299)T(0.299)S(0.299)FRGGMGS(0.103)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.463)T(0.242)S(0.242)FRGGMGS(0.051)GGLAT(0.002)GIAGGLAGMGGIQNEKETMQSLNDR 87.566 6.76E-12 158130000 2948.56 2303.65 3424.89 3885.54 5232.2 2746.22 1567.24 4547.4 912.73 347.86 TRUE FALSE 2697.769488 2153.681966 3192.418009 4184.804964 5023.790395 2901.708603 1462.692279 4507.642561 1007.61155 390.955523 6.90045115 5.508764654 8.165680803 10.7040436 12.8500305 7.422093902 3.741326553 11.52980914 2.577304809 1 8.610860679 -8.411636696 5.53629119 1.064012069 8.280739179 0.504937814 2.617528543 0.185269889 7.240179011 2.668046813 0.693061195 3.88E-09 8.411636696 7.21672711 S(ph)TSLEPVER ddPTM_A459_MK2206_30min_R1 2 STSLEPVER 9 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 S(0.989)T(0.011)SLEPVER;S(0.988)T(0.012)SLEPVER 125.74 0.0049725 11953500 6588 5801.6 4991.6 4255.9 4734.7 3039.5 3996.9 3924.9 3335.2 3926.1 TRUE FALSE 6027.656005 5423.914786 4652.784099 4583.690155 4546.106873 3211.593863 3730.274094 3890.585013 3681.905975 4412.494909 1.366042597 1.229217234 1.054456537 1.038797834 1.030280367 0.727840809 0.845388872 0.881720001 0.834427246 1 12.1073789 -5.159398289 0.693106665 0.856053946 1.530279042 0.807489813 0.079860129 0.843444979 0.431086503 0.037990917 0.412801865 6.93E-06 5.159398289 0.674225096 S(ph)TSLEPVER ddPTM_A459_MK2206_30min_R2 2 STSLEPVER 9 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 S(0.99)T(0.01)SLEPVER;S(0.98)T(0.019)S(0.001)LEPVER 103.31 0.015352 20511200 87919 99451 81905 101977 66528 74765 76053 55808 57350 78994 TRUE FALSE 94650.14624 94512.40796 84635.67182 93645.15289 63915.77644 77610.23447 66067.14974 63102.29722 62338.19933 76416.43225 1.238609857 1.236807388 1.107558536 1.225458323 0.836414035 1.015622323 0.864567316 0.825768691 0.81576956 1 16.22159528 -6.258622763 24.99990467 0.889019201 1.197833458 0.811639228 0.07291832 106.0275236 941085.5901 0.022293798 0.027513209 5.51E-07 6.258622763 0.308814257 S(ph)TSPAGQHHS(ph)PISSR ddPTM_A459_MK2206_30min_R1 1 STSPAGQHHSPISSR 15 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 S(0.599)T(0.275)S(0.126)PAGQHHS(0.999)PIS(0.001)SR 150.92 0.0046667 6022500 772.62 565.26 549.16 513.04 740.95 661.79 678.67 600.55 517.92 559.13 TRUE FALSE 706.9046118 528.4614713 511.8845492 552.5544297 711.4363925 699.2599779 633.3971626 595.2994547 571.7596374 628.3992456 1.124929122 0.840964522 0.81458492 0.879304731 1.132140749 1.112763872 1.00795341 0.947326813 0.909866842 1 9.295537638 -4.725807687 24.16687515 0.963399769 1.124931128 0.192912656 0.100717479 8054.782312 5462577.19 0.028560713 6.047114656 1.88E-05 4.725807687 0.161531359 S(ph)TSPIIGSPPVR ddPTM_A459_MK2206_30min_R1 1 STSPIIGSPPVR 12 0 Q86TB9-4;Q86TB9;Q86TB9-2 Q86TB9-4 PATL1 Protein PAT1 homolog 1 1 S(0.333)T(0.333)S(0.333)PIIGSPPVR 150.14 0.00055722 24768000 5860 5984.2 5770.2 4346.1 4641.4 3915.1 3523.9 2728.3 3048.1 2952.3 TRUE FALSE 5361.576228 5594.627492 5378.534901 4680.837375 4456.52321 4136.769579 3288.827061 2704.446761 3364.960903 3318.053213 1.615880121 1.686117471 1.620991152 1.410717995 1.343113845 1.246746002 0.991191777 0.81507034 1.014137112 1 11.69612131 -6.640859684 0.860156494 0.911611803 1.662965352 0.933784176 0.075661109 0.139074029 0.226300825 0.047623654 0.050842347 2.29E-07 6.640859684 0.751353549 S(ph)TSPIIGSPPVR ddPTM_A459_MK2206_30min_R2 2 STSPIIGSPPVR 12 0 Q86TB9-4;Q86TB9;Q86TB9-2 Q86TB9-4 PATL1 Protein PAT1 homolog 1 1 S(0.656)T(0.172)S(0.172)PIIGSPPVR;S(0.746)T(0.007)S(0.246)PIIGSPPVR 198.97 0.00011796 215990000 295820 274160 273710 287250 220790 210279 228210 158845 127543 133207 TRUE FALSE 318468.2066 260545.6131 282835.3548 263780.7561 212120.6752 218281.3147 198245.7529 179606.5869 138636.4596 128860.4665 2.471419011 2.021920455 2.194896251 2.047026239 1.646126861 1.693935469 1.538452857 1.393806741 1.075864952 1 16.9754502 -6.71203788 0.362900498 0.93410849 2.538681913 0.933416011 0.11727878 0.417492449 0.111321767 0.131269759 0.255391982 1.94E-07 6.71203788 1.604573423 up S(ph)TSPPPSPEVWADSR ddPTM_A459_MK2206_30min_R1 1 STSPPPSPEVWADSR 15 0 Q08495;Q08495-2;E5RGQ0;Q08495-3;E5RFK4;E5RJ61;E5RGQ7;E5RJC0 Q08495 DMTN Dematin 1 S(0.333)T(0.333)S(0.333)PPPSPEVWADSR 120.29 0.0018091 13256000 3580.5 3778.9 4108.8 3311.4 4573.3 4420.1 5436.1 4469.8 4417.4 3912.4 TRUE FALSE 3275.959673 3532.892923 3829.906104 3566.444602 4391.135777 4670.362242 5073.467688 4430.72101 4876.604538 4397.097649 0.745027728 0.803460192 0.871007744 0.811090607 0.998644135 1.062146583 1.153821928 1.007646717 1.109050771 1 12.10233586 -6.36900296 2.311600379 1.073006664 0.805834759 0.852929772 0.050912334 0.108762148 1.13941529 0.017289729 0.020528433 4.28E-07 6.36900296 -0.267171905 S(ph)TSPSAAGGQQK ddPTM_A459_MK2206_30min_R1 1 STSPSAAGGQQK 12 0 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 S(0.382)T(0.382)S(0.236)PSAAGGQQK 149.41 0.00057682 2400000 1766.9 1591.2 1208.1 1035.1 1143.7 886.91 1534.7 1254.6 135.57 1230.6 TRUE FALSE 1616.615877 1487.612591 1126.097538 1114.823581 1098.144007 937.1260777 1432.322963 1243.631164 149.6629866 1383.056019 1.168872305 1.075598219 0.814209636 0.806058154 0.793998213 0.677576371 1.0356218 0.89919074 0.108211804 1 10.43364388 -5.190472189 1.892716045 0.763144977 1.189665164 0.261950227 0.242506405 0.59554887 3.634077811 0.067707415 0.331662046 6.45E-06 5.190472189 0.426520188 S(ph)TSPSAAGGQQK ddPTM_A459_MK2206_30min_R2 2 STSPSAAGGQQK 12 0 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 S(0.794)T(0.166)S(0.04)PSAAGGQQK;S(0.997)T(0.002)SPSAAGGQQK 148.91 0.00059009 27312000 119576 80707 83761 90437 88492 62725 104956 106873 73201 113367 TRUE FALSE 128730.8305 76699.20774 86553.54993 83048.00781 85017.35944 65112.04383 91175.15113 120841.668 79567.89066 109667.8441 1.173824758 0.699377364 0.789233623 0.757268537 0.775225958 0.593720469 0.831375431 1.101887879 0.725535286 1 16.74278105 -10.30595815 6.674159133 1.000000001 0.820306976 0.084183134 0.169205178 3.41E-09 5.45E-10 0.162774895 0.039478711 4.94E-11 10.30595815 -0.179693026 S(ph)TSPTFNK ddPTM_A459_MK2206_30min_R2 1 STSPTFNK 8 0 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 S(0.622)T(0.009)S(0.368)PTFNK 100.25 0.017997 8980700 50550 77637 68634 83649 78220 69824 87739 64151 67066 72998 TRUE FALSE 54420.14687 73781.65947 70922.2233 76814.60912 75148.68978 72481.20125 76218.76391 72535.75596 72899.27945 70616.08124 0.770648072 1.044828008 1.004335302 1.087777851 1.064186634 1.026412114 1.079340039 1.027184668 1.032332553 1 16.10770914 -4.761255942 24.99964365 1.043388397 0.770647771 0.893962921 0.027889547 1.235904366 167989.0385 0.006753614 0.038030791 1.73E-05 4.761255942 -0.272740626 S(ph)TSPVTDPSIPIRK ddPTM_A459_MK2206_30min_R1 1 STSPVTDPSIPIRK 14 1 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.741)T(0.21)S(0.048)PVTDPSIPIRK 82.663 0.046009 0 3354.8 3368.6 3635.2 3350.4 3693.2 3311.7 3905.8 3222.3 2839.2 2508.6 TRUE FALSE 3069.456643 3149.303528 3388.452752 3608.448389 3546.092024 3499.205592 3645.251209 3194.127771 3134.345 2819.384307 1.088697499 1.11701818 1.201841389 1.279871062 1.257754047 1.241124023 1.292924558 1.132916773 1.111712579 1 11.46116443 -8.416850871 1.723420898 1.005785696 1.211423613 0.498146968 0.064922825 0.314102285 1.976434861 0.068547924 0.01989187 3.83E-09 8.416850871 0.205637918 S(ph)TSQELAK ddPTM_A459_MK2206_30min_R2 1 STSQELAK 8 0 E7EV90;Q5BKX6-2;Q5BKX6;Q5BKX6-3 E7EV90 SLC45A4 Solute carrier family 45 member 4 1 S(0.971)T(0.017)S(0.012)QELAK 85.29 0.03548 6924800 80327 41681 59472 48955 50292 49216 86969 42797 74415 68105 TRUE FALSE 86476.89688 39611.18215 61454.7668 44955.2199 48317.28338 51088.94937 75549.86583 48390.71484 80887.48219 65882.73943 1.312588056 0.601237631 0.932790095 0.682352013 0.733383035 0.775452718 1.146732308 0.734497613 1.227749224 1 16.00761292 -8.262233152 24.99995176 1.113874616 0.854301607 0.177205301 0.213643863 114.9690723 3620623.7 0.16166056 0.05117973 5.47E-09 8.262233152 -0.259573009 S(ph)TSQSIVSLLTGTAGEDEK ddPTM_A459_MK2206_30min_R2 1 STSQSIVSLLTGTAGEDEK 19 0 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 S(0.499)T(0.127)S(0.108)QS(0.253)IVS(0.013)LLTGTAGEDEK 72.21 0.013136 1620400 1124.8 421.33 754.1 665.43 1222 845.42 2200.7 1118.5 952.78 2790 TRUE FALSE 1210.915553 400.4073649 779.2413176 611.0622404 1174.01814 877.5930505 1911.745446 1264.69179 1035.651082 2698.962528 0.448659639 0.14835603 0.288718835 0.226406345 0.434988677 0.325159405 0.708326042 0.46858442 0.38372192 1 11.39818923 -14.52287875 0.131478949 3.140539767 0.121674501 0.693099561 0.13066645 79.2941767 0.652549044 44.37541131 0.964209886 3.00E-15 14.52287875 -3.018865266 S(ph)TSSSSDTMSTFKPMVAPR ddPTM_A459_MK2206_30min_R2 1 STSSSSDTMSTFKPMVAPR 19 1 Q7Z6B7;Q7Z6B7-2;G5EA48 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 S(0.316)T(0.316)S(0.254)S(0.09)S(0.007)S(0.017)DT(0.001)MSTFKPMVAPR 72.383 0.0070717 12911000 9197.6 10619 9883.3 12519 9238.5 9290 12146 5883.6 7236.1 9483.7 TRUE FALSE 9901.775328 10091.6759 10212.80429 11496.15765 8875.75007 9643.53746 10551.21561 6652.606721 7865.482898 9174.247646 1.079301073 1.100000381 1.113203467 1.253089964 0.967463536 1.051152948 1.15009056 0.725139213 0.857343643 1 13.16337414 -7.751862522 25 0.84343106 1.101069872 0.58741874 0.092292024 122.8991658 320825.4201 0.043533351 0.024719028 1.77E-08 7.751862522 0.257638812 S(ph)TSTPNVHMVSTTLPVDSR ddPTM_A459_MK2206_30min_R1 1 STSTPNVHMVSTTLPVDSR 19 0 H7C155;P04049;P04049-2 H7C155 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 S(0.298)T(0.298)S(0.298)T(0.105)PNVHMVSTTLPVDSR 71.857 0.025631 9456800 1121.5 1219.1 1273.7 1084.8 1287.9 1083.7 1322.7 1233 878.82 798.06 TRUE FALSE 1026.110536 1139.736368 1187.244793 1168.351484 1236.600216 1145.058157 1234.465096 1222.220011 970.1764839 896.9296978 1.1440256 1.270708698 1.323676533 1.302612107 1.378703614 1.276642038 1.376323138 1.362670914 1.08166391 1 9.8088511 -8.392388223 4.1841602 1.005004666 1.307405047 0.724883592 0.06563581 0.113746652 3.086552143 0.065008996 0.017095019 4.05E-09 8.392388223 0.30240038 S(ph)TSTPNVHMVSTTLPVDSR ddPTM_A459_MK2206_30min_R2 1 STSTPNVHMVSTTLPVDSR 19 0 H7C155;P04049;P04049-2 H7C155 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 S(0.311)T(0.311)S(0.311)T(0.067)PNVHMVSTTLPVDSR 137.9 0.00010212 98121000 23945 28139 30234 37983 36357 43613 40833 36305 33713 32869 TRUE FALSE 25778.24761 26741.65818 31241.98647 34879.6674 34929.4415 45272.72328 35471.57805 41050.18815 36645.2958 31796.48722 0.810726274 0.841025551 0.982560943 1.096966063 1.098531459 1.423827826 1.115581662 1.291029033 1.152495103 1 14.95657977 -5.637885951 1.265274124 1.205667353 0.797264743 0.626663019 0.108512713 0.305888466 0.929049081 0.035319906 0.108642207 2.30E-06 5.637885951 -0.40840261 S(ph)TSTPTSPGPR ddPTM_A459_MK2206_30min_R1 1 STSTPTSPGPR 11 0 H3BUF6;H3BRB0;A0A0C4DGL7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 S(0.5)T(0.104)S(0.18)T(0.052)PT(0.155)S(0.008)PGPR 125.72 0.0032958 26525000 3147.4 2249.9 2949.9 2755.4 3149.5 2425.8 2674.6 2431.8 2098.6 1704.9 TRUE FALSE 2879.697102 2103.431101 2749.669007 2967.621385 3024.048746 2563.1467 2496.182314 2410.539029 2316.75698 1916.115883 1.502882538 1.097757771 1.435022292 1.548769264 1.578218088 1.337678332 1.302730349 1.258034052 1.209090223 1 10.9039691 -8.309631259 0.861052301 1.010519769 1.414262444 0.508401983 0.128087966 0.522231051 0.840083063 0.131170703 0.048296124 4.90E-09 8.309631259 0.403742674 S(ph)TTAHSWQR ddPTM_A459_MK2206_30min_R1 2 STTAHSWQR 9 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 S(0.92)T(0.04)T(0.04)AHSWQR;S(0.973)T(0.026)T(0.001)AHSWQR 112.94 0.0062209 5339400 2801.23 1842.51 1995.68 1954.83 2611.1 2791.7 2908.62 2726.63 1795.66 1947.34 TRUE FALSE 2562.970679 1722.562264 1860.218802 2105.391345 2507.094358 2949.763641 2714.591267 2702.791361 1982.325283 2188.591181 1.171059584 0.787064427 0.849961755 0.961984752 1.145528859 1.347791066 1.240337296 1.234945743 0.90575403 1 11.09578678 -6.241992769 4.048329307 1.174123584 0.920386617 0.293756322 0.150569813 0.237597216 9.143939934 0.04675297 0.058533127 5.73E-07 6.241992769 -0.253736967 S(ph)TTELDDYSTNK ddPTM_A459_MK2206_30min_R1 2 STTELDDYSTNK 12 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.884)T(0.115)T(0.001)ELDDYSTNK;S(0.995)T(0.001)T(0.004)ELDDYSTNK 246.25 1.75E-15 25959000 8816 8094.2 8150.6 5816.1 7075.8 6885.2 8648 8210 10499.7 11625.6 TRUE FALSE 8066.152905 7567.266109 7597.359981 6264.05703 6793.955903 7275.034074 8071.107699 8138.220836 11591.18139 13065.8671 0.617345397 0.579162948 0.581466192 0.479421456 0.519977423 0.556796883 0.617724613 0.622861137 0.887134493 1 13.67351525 -8.31097108 1.796179089 1.004811604 0.558050451 0.937895311 0.039073782 0.079760875 0.496529348 0.040138862 0.011768449 4.89E-09 8.31097108 -0.446761153 S(ph)TTELDDYSTNK ddPTM_A459_MK2206_30min_R2 2 STTELDDYSTNK 12 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.849)T(0.15)T(0.001)ELDDYSTNK;S(0.849)T(0.148)T(0.003)ELDDYSTNK 159.58 0.0004647 29124000 56290 55239 54906 66364 54882 52957 66215 52604 52709 69804 TRUE FALSE 60599.60568 52495.91159 56736.53864 60941.84891 52727.05692 54972.31574 57520.89096 59479.52342 57293.53354 67526.3012 0.897422258 0.777414291 0.840213926 0.902490553 0.780837333 0.814087471 0.851829434 0.88083491 0.848462488 1 16.04316191 -9.544098443 0.622926746 1.009369427 0.835181714 0.571185658 0.040906388 3.35257921 1.463860728 0.119059583 0.016245706 2.86E-10 9.544098443 -0.174187713 S(ph)TTPPPAEPVSLPQEPPK ddPTM_A459_MK2206_30min_R2 1 STTPPPAEPVSLPQEPPK 18 0 Q9UN86-2;Q9UN86 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.33)T(0.33)T(0.33)PPPAEPVS(0.01)LPQEPPK 64.761 0.022943 4954700 42443 54747 55248 53970 53985 46661 57342 45088 45430 58882 TRUE FALSE 45692.46871 52028.34359 57089.94075 49560.47836 51865.27765 48436.71705 49812.92652 50981.15641 49381.41928 56960.68516 0.802175546 0.913407966 1.002269207 0.870082202 0.910545186 0.850353484 0.874514174 0.895023581 0.866938646 1 15.79767888 -10.65030103 4.669796867 1.000009133 0.89035664 0.320491148 0.04906296 71300475.87 0.131242134 7076.627935 0.012097516 2.24E-11 10.65030103 -0.109652493 S(ph)TTPPPAEPVSLPQEPPKPR ddPTM_A459_MK2206_30min_R1 2 STTPPPAEPVSLPQEPPKPR 20 1 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.333)T(0.333)T(0.333)PPPAEPVSLPQEPPKPR;S(0.437)T(0.335)T(0.229)PPPAEPVSLPQEPPKPR 205.33 1.18E-16 954141000 18111.2 21298.9 19277 17261.6 18660.2 16535 18522.2 18207.1 17029.5 16434.7 TRUE FALSE 16570.74733 19912.33774 17968.53095 18591.09142 17916.92472 17471.19741 17286.61783 18047.91724 18799.77747 18470.75471 0.897134286 1.078046785 0.972809787 1.006514986 0.970015844 0.945884328 0.935891256 0.977107732 1.017813173 1 14.1729552 -6.285426254 21.39182699 0.969950996 0.993883858 0.01122324 0.046938006 414.4377483 369597.9657 0.014082794 0.015986869 5.18E-07 6.285426254 0.023932863 S(ph)TTPPPAEPVSLPQEPPKPR ddPTM_A459_MK2206_30min_R2 7 STTPPPAEPVSLPQEPPKPR 20 1 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.545)T(0.228)T(0.228)PPPAEPVSLPQEPPKPR;S(0.333)T(0.333)T(0.333)PPPAEPVSLPQEPPKPR;S(0.333)T(0.333)T(0.333)PPPAEPVSLPQEPPKPR;S(0.333)T(0.333)T(0.333)PPPAEPVSLPQEPPKPR;S(0.333)T(0.333)T(0.333)PPPAEPVSLPQEPPKPR;S(0.333)T(0.333)T(0.333)PPPAEPVSLPQEPPKPR;S(0.333)T(0.333)T(0.333)PPPAEPVSLPQEPPKPR 201.85 4.24E-16 2642943200 756070 1028971 801151 938859 927352 780827 962893 763459 745771 891876 TRUE FALSE 813955.3005 977873.7964 827860.9745 862151.2164 890939.5009 810541.9186 836463.9925 863245.7126 810636.8135 862774.1592 0.943416411 1.133406449 0.959533808 0.999277977 1.032645092 0.939460124 0.969505152 1.000546555 0.939570112 1 19.71862344 -6.159994698 1.001225898 0.972349794 1.027279849 0.094403744 0.053212011 1.144384843 2.391066222 0.022740265 0.039876845 6.92E-07 6.159994698 0.054930055 S(ph)TTPTSSPFR ddPTM_A459_MK2206_30min_R2 1 STTPTSSPFR 10 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.463)T(0.047)T(0.463)PT(0.005)S(0.017)S(0.004)PFR 102.53 0.01519 130740000 261180 311330 259170 290660 320370 324020 335770 253240 269760 302690 TRUE FALSE 281176.1416 295869.8049 267810.5984 266912.1482 307790.6641 336350.8082 291682.9957 286339.3375 293223.2372 292813.2501 0.960257576 1.010438581 0.914612294 0.911543956 1.051150055 1.148687117 0.996140016 0.977890643 1.001400166 1 18.15962131 -6.270568793 24.94940962 1.032426091 0.951114863 0.364257961 0.051646158 780.0908311 2131874.91 0.017600395 0.020252847 5.36E-07 6.270568793 -0.081311227 S(ph)TTTGHLIYK ddPTM_A459_MK2206_30min_R1 1 STTTGHLIYK 10 0 P68104;A0A087WVQ9;Q5VTE0;A0A087WV01;A0A2U3TZH3;Q05639;A6PW80;Q5JR01;A0A2R8Y660;A0A2R8Y488;A0A2R8YDN5 P68104 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha;Elongation factor 1-alpha 2 1 S(0.99)T(0.01)TTGHLIYK 156.58 0.00050635 20447000 3517.9 2596.5 3237 2433.7 3360.5 3822 3834.6 2878 2767.9 2569 TRUE FALSE 3218.684132 2427.467378 3017.281459 2621.143996 3226.644169 4038.398337 3578.800831 2852.837949 3055.63311 2887.267115 1.114785714 0.840749152 1.045030244 0.907828715 1.117542659 1.398692319 1.239511513 0.988075518 1.058313273 1 11.49548887 -6.379111255 5.950681144 1.154188672 0.973079094 0.246487209 0.132290236 0.319660169 14.43541994 0.043426558 0.049265056 4.18E-07 6.379111255 -0.181109578 S(ph)TVLGLPQHVQK ddPTM_A459_MK2206_30min_R1 1 STVLGLPQHVQK 12 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 S(0.5)T(0.5)VLGLPQHVQK 81.128 0.025684 10779000 8472.3 8474.6 8570.5 8053.7 8331.1 7635.9 9517.4 9103.4 8659.6 8978.4 TRUE FALSE 7751.686395 7922.902 7988.758339 8673.997369 7999.254646 8068.238059 8882.511611 9023.809934 9559.796409 10090.71198 0.768200144 0.785167788 0.791694219 0.859602116 0.792734414 0.799570742 0.880266094 0.894268903 0.947385718 1 13.30074035 -7.95139712 0.731682575 1.001522454 0.792444455 0.894997869 0.024038621 0.202108277 0.217839847 0.023913024 0.010669839 1.12E-08 7.95139712 -0.209077998 S(ph)TVLGLPQHVQK ddPTM_A459_MK2206_30min_R2 3 STVLGLPQHVQK 12 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 S(0.929)T(0.071)VLGLPQHVQK;S(0.5)T(0.5)VLGLPQHVQK;S(0.5)T(0.5)VLGLPQHVQK 211.38 4.98E-06 28789200 173348 209220 203824 196880 190084 174029 194991 130796 162747 192151 TRUE FALSE 186619.6562 198830.439 210619.3904 180794.2742 182620.3471 180651.7955 169388.4475 147891.4863 176902.4399 185881.1286 1.003973117 1.069664471 1.133086462 0.972633831 0.982457705 0.971867327 0.911272966 0.795623996 0.95169661 1 17.50402078 -6.506371177 1.158322152 0.902455355 1.063141617 0.465923356 0.062049373 0.381300383 1.07715261 0.02891136 0.033444094 3.12E-07 6.506371177 0.160686263 S(ph)VASSQPAKPTK ddPTM_A459_MK2206_30min_R2 1 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.956)VAS(0.044)SQPAKPTK 64.827 0.04408 50034000 53697 61657 53935 73281 55274 46457 76613 64775 48805 57085 TRUE FALSE 57808.08361 58595.20304 55733.16598 67293.70789 53103.66503 48224.95369 66553.62107 73241.31491 53049.97068 55222.32113 1.046824589 1.061078235 1.009250695 1.218596149 0.961634063 0.873287336 1.205194199 1.326299102 0.960661732 1 15.75296391 -7.316779164 24.9999144 1.150230354 1.034661531 0.103011366 0.126184317 585.7850548 264627.8235 0.052925962 0.035682616 4.82E-08 7.316779164 -0.115568823 S(ph)VAVSDEEEVEEEAER ddPTM_A459_MK2206_30min_R1 2 SVAVSDEEEVEEEAER 16 0 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 S(0.99)VAVS(0.01)DEEEVEEEAER;S(0.85)VAVS(0.15)DEEEVEEEAER 299.17 5.93E-88 14098500 2876.2 3333.09 3013.96 3128.2 3546.5 3212.23 3821.9 3188.9 3285.17 2682.99 TRUE FALSE 2631.564086 3116.105235 2809.380793 3369.134506 3405.235395 3394.103687 3566.948024 3161.019784 3626.675178 3015.379057 0.872714188 1.033404151 0.931684123 1.117317074 1.12928933 1.125597685 1.182918617 1.04829931 1.202726128 1 11.55812366 -5.767130447 24.71454344 1.121022918 0.95468114 0.575640888 0.066324595 77.06686395 334679.5892 0.017137249 0.026238837 1.71E-06 5.767130447 -0.166341778 S(ph)VAVSDEEEVEEEAER ddPTM_A459_MK2206_30min_R2 1 SVAVSDEEEVEEEAER 16 0 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 S(0.727)VAVS(0.273)DEEEVEEEAER 225.6 6.42E-12 10620000 7559 11328 10143 13033 14292 17875 16865 13248 12453 13224 TRUE FALSE 8137.722852 10765.46799 10481.16256 11968.16221 13730.82427 18555.24565 14650.60524 14979.55909 13536.13943 12792.50196 0.636132234 0.841545151 0.81932077 0.935560709 1.073349397 1.450478234 1.145249403 1.170963986 1.058130729 1 13.64301083 -6.057484486 1.848703567 1.177840081 0.761205916 0.669316749 0.122610195 0.205434673 1.401063365 0.041553205 0.064304776 8.76E-07 6.057484486 -0.416634164 S(ph)VCPGGSSPGSSSGGGR ddPTM_A459_MK2206_30min_R1 1 SVCPGGSSPGSSSGGGR 17 0 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 S(0.927)VCPGGS(0.036)S(0.036)PGSSSGGGR 266.07 2.51E-41 14668000 2008.9 2000.6 1827.1 1654.3 1753.3 1593.2 1782.3 1868.6 1436.4 1368.3 TRUE FALSE 1838.032506 1870.360576 1703.081543 1781.714473 1683.462348 1683.405607 1663.406019 1852.263027 1585.71892 1537.815334 1.195223162 1.216245238 1.107468176 1.158601058 1.094710341 1.094673443 1.081668248 1.204476887 1.031150415 1 10.58666655 -1.522878746 0.056310643 0.814089269 1.736557496 0.545787448 0.047044022 320.3274044 1.358176047 4.772039387 24.7034842 0.03 1.522878746 0.922468228 S(ph)VDALDDLTPPSTAESGSR ddPTM_A459_MK2206_30min_R2 2 SVDALDDLTPPSTAESGSR 19 0 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 S(1)VDALDDLTPPSTAESGSR;S(1)VDALDDLTPPSTAESGSR 141.6 4.71E-05 0 5122.9 2489.4 5192.5 3492.5 2053.15 1916.09 4781 2156.3 3690.5 5224.6 TRUE FALSE 5515.113163 2365.780016 5365.615358 3207.151578 1972.533015 1989.008148 4153.248957 2438.135814 4011.493019 5054.12173 1.091210987 0.468089243 1.061631604 0.634561601 0.390282055 0.393541797 0.821754833 0.482405439 0.793707242 1 12.3032447 -5.964752287 24.76024715 0.607618999 0.835590133 0.139140609 0.243861096 292.7805292 205665.7322 0.065538149 0.097208347 1.08E-06 5.964752287 0.227971134 S(ph)VDAYDSYWESR ddPTM_A459_MK2206_30min_R2 2 SVDAYDSYWESR 12 0 Q9UM82 Q9UM82 SPATA2 Spermatogenesis-associated protein 2 1 S(1)VDAYDSYWESR;S(1)VDAYDSYWESR 129.37 0.0023191 4431200 7589.7 9644.3 9312.7 10323.6 8733.9 9254.2 9292 7628.8 8584.1 8923 TRUE FALSE 8170.773267 9165.378086 9623.18077 9480.128856 8390.963202 9606.375066 8071.949238 8625.910354 9330.729501 8631.843241 0.946584992 1.061810071 1.114846563 1.098273983 0.972094021 1.11289962 0.935136218 0.999312674 1.080966051 1 13.07545295 -7.255167553 24.98309886 1.003796459 1.053025105 0.122710273 0.061737121 1123.056924 4473574.831 0.024304777 0.018288368 5.56E-08 7.255167553 0.049228646 S(ph)VDEIAK ddPTM_A459_MK2206_30min_R1 2 SVDEIAK 7 0 A6ND36;A6ND36-2 A6ND36 FAM83G Protein FAM83G 1 S(1)VDEIAK;S(1)VDEIAK 102.62 0.01916 8385200 4926.1 5539.6 4907.2 4270.6 4719.4 5090.4 5242.1 4005.4 4861.3 5036.2 TRUE FALSE 4507.109327 5178.971033 4574.112936 4599.522352 4531.416305 5378.614049 4892.409074 3970.38121 5366.649531 5660.122477 0.796291837 0.91499275 0.808129675 0.812618874 0.800586263 0.950264605 0.864364524 0.7014656 0.948150778 1 12.46661756 -8.509161878 24.47334964 1.000000021 0.835834851 0.44446322 0.065070616 421.0636672 751252.9728 0.062391424 0.016109396 3.10E-09 8.509161878 -0.164165171 S(ph)VDEIAK ddPTM_A459_MK2206_30min_R2 2 SVDEIAK 7 0 A6ND36;A6ND36-2 A6ND36 FAM83G Protein FAM83G 1 S(1)VDEIAK;S(1)VDEIAK 101.65 0.019789 22511000 116366 123966 117278 102561 95263 89247 116094 108284 118079 88922 TRUE FALSE 125275.0704 117810.0287 121187.99 94181.43822 91522.49596 92643.35712 100850.7183 122437.0906 128349.298 86020.48242 1.456340012 1.36955787 1.408827137 1.094872239 1.063961668 1.076991834 1.172403543 1.423348104 1.492078333 1 16.3923926 -5.743235484 24.49850158 1.196153024 1.407373463 0.316130742 0.149663309 275.729772 371068.6733 0.044868016 0.077505492 1.81E-06 5.743235484 0.211220439 S(ph)VDEVNYWDK ddPTM_A459_MK2206_30min_R1 1 SVDEVNYWDK 10 0 F5H5P2;P12694;P12694-2;F5GXU9 F5H5P2 BCKDHA "2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial" 1 S(1)VDEVNYWDK 173.06 0.00012547 13623000 1321.1 1452.6 1162 1101.8 1175.7 1076 1579.8 1054.3 1518.7 2396.9 TRUE FALSE 1208.733508 1358.035476 1083.126678 1186.660827 1128.869379 1136.92219 1474.414425 1045.082366 1676.5743 2693.846068 0.448701773 0.504125121 0.402074451 0.440508031 0.419054894 0.42204423 0.547326903 0.387951776 0.622371976 1 11.3954517 -8.628378638 3.114807904 0.999820132 0.448983705 0.930788615 0.0459003 0.097525279 2.106073808 0.042871164 0.011381669 2.35E-09 8.628378638 -0.550836427 down S(ph)VDEVNYWDKQDHPISR ddPTM_A459_MK2206_30min_R1 1 SVDEVNYWDKQDHPISR 17 1 F5H5P2;P12694;P12694-2 F5H5P2 BCKDHA "2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial" 1 S(1)VDEVNYWDKQDHPISR 55.621 0.03332 4628400 1855 1753.1 1728.3 1519.9 1933.7 1744.6 1706.3 1713 1225.1 1361.6 TRUE FALSE 1697.222509 1638.972871 1610.987811 1636.962961 1856.676634 1843.377744 1592.47584 1698.023422 1352.453529 1530.285288 1.109088954 1.071024393 1.052736914 1.069710971 1.213287907 1.204597443 1.040639842 1.109612329 0.883791761 1 10.57958492 -8.248879077 24.74311305 0.941895886 1.108803132 0.542584921 0.061312006 461.4852559 909105.7767 0.044895472 0.016709317 5.64E-09 8.248879077 0.166907247 S(ph)VDFDSLTVR ddPTM_A459_MK2206_30min_R1 4 SVDFDSLTVR 10 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 S(0.98)VDFDS(0.02)LTVR;S(1)VDFDSLTVR;S(1)VDFDSLTVR;S(1)VDFDSLTVR 223.77 7.66E-05 137417000 7495.1 6600.3 6717.8 6108.9 6939.8 7385.5 8009 7667.3 6826.2 6146.8 TRUE FALSE 6857.602387 6170.61927 6261.814453 6579.408536 6663.373071 7803.660628 7474.734223 7600.265604 7535.807918 6908.31199 0.992659625 0.893216647 0.906417438 0.952390185 0.964544317 1.129604546 1.081991409 1.100162473 1.090832019 1 12.75411752 -6.647558053 5.049364641 1.086439917 0.934202909 0.751406828 0.039977757 0.096499506 3.877118568 0.013064329 0.012996976 2.25E-07 6.647558053 -0.152237008 S(ph)VDFDSLTVR ddPTM_A459_MK2206_30min_R2 5 SVDFDSLTVR 10 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 S(1)VDFDSLTVR;S(1)VDFDSLTVR;S(1)VDFDSLTVR;S(1)VDFDSLTVR;S(0.999)VDFDS(0.001)LTVR 169.65 0.00022878 44203100 63823.7 72156.3 60422.2 71874.2 75271.7 72281 85309 73752.2 75157.1 71297.4 TRUE FALSE 68710.09154 68573.12307 62436.64599 66001.84795 72316.15485 75031.7041 74107.82583 83391.86577 81694.12871 68970.97168 0.996217537 0.994231651 0.90525977 0.956951111 1.04850132 1.08787367 1.074478495 1.209086428 1.184471187 1 16.07370167 -6.680434313 1.478888694 1.134248604 0.960644351 0.571086249 0.059792366 0.271987628 1.237157389 0.026415206 0.025619041 2.09E-07 6.680434313 -0.173604253 S(ph)VDIHDSIQPR ddPTM_A459_MK2206_30min_R2 1 SVDIHDSIQPR 11 0 E5RHL7;E5RIF2;Q9Y6D6 E5RHL7 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 1 S(1)VDIHDSIQPR 81.525 0.027598 7754000 10177 37119 32866 81913 57122 96853 56105 31506 69002 36114 TRUE FALSE 10956.15894 35275.72444 33961.73604 75220.44587 54879.10326 100538.8088 48738.34611 35623.94238 75003.66923 34935.60314 0.313610127 1.009735664 0.972123936 2.153117139 1.570864629 2.877832347 1.395091017 1.019703087 2.146912104 1 15.09241043 -5.617501571 5.032497238 1.76273896 0.734668618 0.394301564 0.55783054 0.210009762 8.720669781 0.153950693 0.273485195 2.41E-06 5.617501571 -1.028070343 S(ph)VEAAAELSAK ddPTM_A459_MK2206_30min_R1 2 SVEAAAELSAK 11 0 P20962;F5H7R9;F5GXR3 P20962 PTMS Parathymosin 1 S(1)VEAAAELSAK;S(1)VEAAAELSAK 248.19 2.53E-15 13307700 5972.8 6927.1 6587.1 4968.9 5122.5 4927.6 6850.6 5261 8234.5 9813.4 TRUE FALSE 5464.781996 6476.144531 6139.986005 5351.605539 4918.459978 5206.596454 6393.608974 5215.003632 9090.505742 11029.15808 0.495484964 0.587183943 0.556704869 0.485223396 0.445950629 0.472075603 0.579700547 0.472837872 0.824224812 1 13.42903505 -8.430092378 3.145134907 0.997103235 0.513309855 0.921950252 0.047775447 0.059681384 1.141868862 0.048628998 0.013002643 3.71E-09 8.430092378 -0.48379338 S(ph)VEDDEEGHLICQSGDVLSAR ddPTM_A459_MK2206_30min_R1 2 SVEDDEEGHLICQSGDVLSAR 21 0 F8WBF5;P49759;P49759-3 F8WBF5 CLK1 Dual specificity protein kinase CLK1 1 S(1)VEDDEEGHLICQSGDVLSAR;S(1)VEDDEEGHLICQSGDVLSAR 177.69 2.71E-14 46780000 4565.4 4294.1 3909.2 3522.9 4043.6 4457.3 4571.5 3588.5 3433.7 3516.72 TRUE FALSE 4177.088756 4014.55331 3643.854396 3794.234368 3882.53485 4709.668474 4266.543576 3557.126123 3790.645403 3952.397823 1.05684927 1.01572602 0.921935129 0.959982911 0.982323901 1.19159778 1.079482321 0.899991924 0.959074863 1 11.94851245 -7.763880712 24.99998965 0.947150052 1.026740681 0.185299625 0.073184884 121.7189463 1246381.528 0.042163662 0.021747967 1.72E-08 7.763880712 0.079590629 S(ph)VEDDEEGHLICQSGDVLSAR ddPTM_A459_MK2206_30min_R2 2 SVEDDEEGHLICQSGDVLSAR 21 0 F8WBF5;P49759;P49759-3 F8WBF5 CLK1 Dual specificity protein kinase CLK1 1 S(1)VEDDEEGHLICQSGDVLSAR;S(1)VEDDEEGHLICQSGDVLSAR 129.66 3.66E-05 41877000 31253 38840 35955 39933 40419 37972 39135 31424 32956 34937 TRUE FALSE 33645.75371 36911.26208 37153.72175 36670.34616 38831.94697 39417.05107 33996.52749 35531.22469 35822.45331 33797.00855 0.995524609 1.092145834 1.099319832 1.085017513 1.14897586 1.166288164 1.00590345 1.051312711 1.059929705 1 15.04460794 -7.285435428 24.8262108 1.033562525 1.099421578 0.349175815 0.045698514 944.1825479 976842.5649 0.020080548 0.013546773 5.18E-08 7.285435428 0.065859052 S(ph)VEDLVR ddPTM_A459_MK2206_30min_R1 2 SVEDLVR 7 0 Q7L9B9 Q7L9B9 EEPD1 Endonuclease/exonuclease/phosphatase family domain-containing protein 1 1 S(1)VEDLVR;S(1)VEDLVR 137.13 0.0028725 7676000 4223.4 4546 3343.5 3643.6 4927.9 4692.2 5158.8 5288.8 5829.3 5261.5 TRUE FALSE 3864.177652 4250.054574 3116.552536 3924.230703 4731.611308 4957.868309 4814.665865 5242.560579 6435.276595 5913.334342 0.653468488 0.718723875 0.527038107 0.663624019 0.800159611 0.838421781 0.814204911 0.886565899 1.088265304 1 12.52975613 -7.21344788 0.651912736 1.032180899 0.627749592 0.809352937 0.069511322 0.337543686 0.290704124 0.063777921 0.04576422 6.12E-08 7.21344788 -0.404431307 S(ph)VEDLVR ddPTM_A459_MK2206_30min_R2 2 SVEDLVR 7 0 Q7L9B9 Q7L9B9 EEPD1 Endonuclease/exonuclease/phosphatase family domain-containing protein 1 1 S(1)VEDLVR;S(1)VEDLVR 124.92 0.0062316 8513200 36250 25832 29390 31276 24207 32097 42356 27229 48524 31255 TRUE FALSE 39025.32787 24549.22044 30369.84793 28720.65075 23256.51155 33318.47383 36794.60632 30787.92379 52744.52981 30235.15191 1.290727032 0.811943016 1.004454948 0.949909259 0.769187852 1.101978053 1.216947956 1.018282424 1.74447709 1 14.88393921 -7.452265172 1.485358717 1.305342493 0.962429938 0.238094856 0.231814024 0.550957306 2.342029104 0.145954371 0.073553146 3.53E-08 7.452265172 -0.342912555 S(ph)VEDVRPHHTDANNQSACFEAPDQK ddPTM_A459_MK2206_30min_R1 1 SVEDVRPHHTDANNQSACFEAPDQK 25 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.983)VEDVRPHHT(0.014)DANNQS(0.003)ACFEAPDQK 46.557 0.025065 13473000 3311.3 2310.7 2496.6 1864.9 3691.8 3275.7 2849.4 2855.7 2437.5 1797.8 TRUE FALSE 3029.656547 2160.27301 2327.137748 2008.534921 3544.747788 3461.167303 2659.321725 2830.732916 2690.886848 2020.525037 1.49944024 1.069164188 1.151749028 0.994065842 1.754369644 1.713003917 1.31615381 1.400988785 1.331776048 1 10.98051451 -4.461859565 21.76742932 1.32625728 5.187008003 0.04384064 0.255326349 1149.123827 423823.8065 0.065834277 7198.906103 3.45E-05 4.461859565 3.860750723 S(ph)VEDVRPHHTDANNQSACFEAPDQK ddPTM_A459_MK2206_30min_R2 2 SVEDVRPHHTDANNQSACFEAPDQK 25 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.922)VEDVRPHHT(0.073)DANNQS(0.005)ACFEAPDQK;S(0.845)VEDVRPHHT(0.106)DANNQS(0.049)ACFEAPDQK 58.324 0.0040524 44651000 172651 255940 216492 299440 302220 288980 332380 246740 270970 267440 TRUE FALSE 185869.2933 243230.3918 223709.7352 274974.7941 290353.3243 299977.3364 288738.1067 278989.7652 294538.4808 258713.4547 0.718436904 0.940153623 0.864700815 1.062854634 1.122296962 1.159496466 1.116053694 1.078373622 1.138473765 1 17.98099556 -5.527955336 1.191084271 1.11353949 0.774059723 0.772921511 0.063979707 0.266471312 0.665994584 0.020906016 0.081254035 2.97E-06 5.527955336 -0.339479767 S(ph)VEEELHQR ddPTM_A459_MK2206_30min_R2 2 SVEEELHQR 9 0 F5H5A3;Q8IVH8-3;Q8IVH8-2;Q8IVH8 F5H5A3 MAP4K3 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 3 1 S(1)VEEELHQR;S(1)VEEELHQR 121.68 0.0021935 5208700 46150 50483 50957 55703 51084 46614 60242 41502 49842 52995 TRUE FALSE 49683.27948 47976.08763 52655.88095 51151.88671 49078.18548 48387.92843 52332.15304 46926.4539 54177.16707 51265.77749 0.969131493 0.935830684 1.027115622 0.997778425 0.957328415 0.943864129 1.020800924 0.915356329 1.056790118 1 15.64570845 -8.281665656 24.91550498 1.028395054 0.972811204 0.284196071 0.036397417 1163.476199 1433199.963 0.03360697 0.008716114 5.23E-09 8.281665656 -0.05558385 S(ph)VEEPTQPGGTGLSDSR ddPTM_A459_MK2206_30min_R1 2 SVEEPTQPGGTGLSDSR 17 0 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 S(1)VEEPTQPGGTGLSDSR;S(1)VEEPTQPGGTGLSDSR 217.65 9.12E-12 16409100 2591.24 2306.95 2375.64 1724.93 2013.54 2006.24 2316.49 2042.46 2297.97 2713.5 TRUE FALSE 2370.841431 2156.767136 2214.388176 1857.784407 1933.336438 2119.831575 2161.961179 2024.602988 2536.852205 3049.668866 0.777409462 0.707213547 0.726107743 0.609175779 0.633949626 0.695102212 0.708916697 0.663876334 0.831845133 1 11.57443689 -8.539394431 2.808953078 0.99945467 0.688223046 0.822335015 0.045324059 0.107570454 2.106907831 0.046397117 0.012446749 2.89E-09 8.539394431 -0.311231624 S(ph)VEEPTQPGGTGLSDSR ddPTM_A459_MK2206_30min_R2 2 SVEEPTQPGGTGLSDSR 17 0 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 S(1)VEEPTQPGGTGLSDSR;S(1)VEEPTQPGGTGLSDSR 210.57 3.34E-09 11063500 15299.4 17134 17873.6 17636.3 20004.3 16808.7 21742 17528.5 18065.9 19887.5 TRUE FALSE 16470.73383 16283.15048 18469.4969 16195.35787 19218.83067 17448.36686 18887.24928 19819.53513 19637.23933 19238.5725 0.856130767 0.846380389 0.96002429 0.841817025 0.998973841 0.906947064 0.981738602 1.030197803 1.020722266 1 14.23171414 -6.501929285 0.522416072 1.025634819 0.846866793 0.62393842 0.043457586 0.696796696 0.398756223 0.035512044 0.05876259 3.15E-07 6.501929285 -0.178768026 S(ph)VELCCASR ddPTM_A459_MK2206_30min_R2 1 SVELCCASR 9 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(1)VELCCASR 104.82 0.014102 7545500 9505 4537.7 3209.1 9491.2 4201.2 14400 8076.9 3779 11055 9568.3 TRUE FALSE 10232.71011 4312.364416 3316.089792 8715.738599 4036.239779 14948.00209 7016.393328 4272.928275 12016.54392 9256.087155 1.105511426 0.465894967 0.358260433 0.941622357 0.436063286 1.614937483 0.758030171 0.461634404 1.298231501 1 13.17618673 S(ph)VELDLNQAHMEETPK ddPTM_A459_MK2206_30min_R1 2 SVELDLNQAHMEETPK 16 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK 195.55 8.37E-07 11253000 5320 6263.7 6218.2 5040.2 5499.3 4872.6 5678.4 5345.8 5841.4 5038.3 TRUE FALSE 4867.506064 5855.931992 5796.125909 5428.397077 5280.251236 5148.482401 5299.604297 5299.062234 6448.634434 5662.482641 0.859606355 1.034163345 1.023601532 0.958660259 0.932497558 0.909227052 0.935915328 0.935819599 1.138835179 1 12.46721901 -8.244320613 24.7846792 1.069417596 0.952084601 0.414361628 0.057298415 630.8054546 913288.2909 0.039118839 0.014708764 5.70E-09 8.244320613 -0.117332995 S(ph)VELDLNQAHMEETPK ddPTM_A459_MK2206_30min_R2 4 SVELDLNQAHMEETPK 16 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK 170.22 6.63E-06 26227100 125314.4 138089 136392 140635 140197 113967 162928 126563.3 118867.2 156018 TRUE FALSE 134908.5668 131231.7011 140939.2412 129144.6706 134692.1613 118304.094 141535.3579 143105.5579 129206.0542 150927.1454 0.89386549 0.869503632 0.93382301 0.855675566 0.892431649 0.783849013 0.937772708 0.948176403 0.856082276 1 17.20349278 -10.24411382 0.450238958 1.031245163 0.880504383 0.349451076 0.046486551 13.59035494 2.17026488 0.655499832 0.026145251 5.70E-11 10.24411382 -0.15074078 S(ph)VENLPECGITHEQR ddPTM_A459_MK2206_30min_R1 4 SVENLPECGITHEQR 15 0 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR 226.22 1.19E-13 126407000 16892.9 15361 15526.6 12882.9 15813.37 13649.17 15228.9 14445.7 13611.6 13130.8 TRUE FALSE 15456.07015 14360.99611 14472.69765 13875.14319 15183.48999 14421.97421 14213.00787 14319.40277 15026.57453 14757.54264 1.047333593 0.97312923 0.980698346 0.940206885 1.028863027 0.977261226 0.963101257 0.970310784 1.018230128 1 13.84916489 S(ph)VENLPECGITHEQR ddPTM_A459_MK2206_30min_R2 5 SVENLPECGITHEQR 15 0 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR 197.1 1.40E-05 331683000 489827 668590 606004 747553 676357 644212 715658 586182 616695 650735 TRUE FALSE 527328.5317 635388.7928 626207.8709 686475.5286 649799.8258 668727.9391 621691.2449 662798.0001 670334.0164 629501.5702 0.837692163 1.009352197 0.994767766 1.090506459 1.032244964 1.062313377 0.987592842 1.052893323 1.064864725 1 19.26385045 -4.211909376 1.431258736 1.040002638 0.269963751 0.773102198 0.031947839 2.346756295 1.397565048 0.008759156 3.875190495 6.14E-05 4.211909376 -0.770038887 S(ph)VEPQDAGPLER ddPTM_A459_MK2206_30min_R1 1 SVEPQDAGPLER 12 0 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 S(1)VEPQDAGPLER 86.699 0.029531 8453200 1017.3 1205.5 1075.2 1230.8 1219.3 1099.1 1371.2 862.15 944.15 764.13 TRUE FALSE 930.7732929 1127.021731 1002.21842 1325.596429 1170.732699 1161.330092 1279.72975 854.6123134 1042.297771 858.7961933 1.083811619 1.312327348 1.167003798 1.543551822 1.363225301 1.352276712 1.490143715 0.995128204 1.213673022 1 9.746171986 -7.771700676 24.99953944 1.078300427 1.333669466 0.426202516 0.138488589 214.579291 522769.7537 0.075027325 0.03667835 1.69E-08 7.771700676 0.255369039 S(ph)VEPQDAGPLER ddPTM_A459_MK2206_30min_R2 4 SVEPQDAGPLER 12 0 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 S(1)VEPQDAGPLER;S(1)VEPQDAGPLER;S(1)VEPQDAGPLER;S(1)VEPQDAGPLER 148.18 0.00060978 49370900 79033 83516 77843 85552 85660 79695 94724 64816 74049 76589 TRUE FALSE 85083.82725 79368.71688 80438.24677 78562.12793 82296.55799 82727.84907 82286.62502 73287.67375 80489.64817 74089.9072 1.148386203 1.071248701 1.085684269 1.060362078 1.11076611 1.116587295 1.110632043 0.989172163 1.08637804 1 16.17698941 -7.747400714 24.99575461 1.028331321 1.098294183 0.514516485 0.033446173 186.4180353 331917.6129 0.015356772 0.008811091 1.79E-08 7.747400714 0.069962862 S(ph)VEYEGDLK ddPTM_A459_MK2206_30min_R2 2 SVEYEGDLK 9 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0;H7C3N7 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(1)VEYEGDLK;S(1)VEYEGDLK 126.67 0.0047481 22538000 162046 130030 138781 126097 123717 99470 158516 133886 105619 161275 TRUE FALSE 174452.3664 123572.8993 143407.8893 115794.4717 118859.249 103255.4006 137702.6588 151385.3599 114805.5497 156012.61 1.118194013 0.792069944 0.919207039 0.742212259 0.761856679 0.661840095 0.882638005 0.970340538 0.735873528 1 17.25130312 -4.757784331 24.9978109 0.823006517 1.118194431 0.402705845 0.105183334 106.6783933 729492.273 0.0261265 0.188450089 1.75E-05 4.757784331 0.295187914 S(ph)VGDDEELQQNESGTSPK ddPTM_A459_MK2206_30min_R2 2 SVGDDEELQQNESGTSPK 18 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 S(1)VGDDEELQQNESGTSPK;S(1)VGDDEELQQNESGTSPK 271.73 3.06E-112 3673500 35977 37053 35156 30873 29834 21940 28203 24302 21529 25686 TRUE FALSE 38731.42678 35213.0019 36328.08349 28350.57714 28662.56726 22774.94207 24499.91222 27478.35484 23401.5535 24847.86792 1.55874246 1.417143797 1.462020146 1.140966188 1.153522199 0.916575303 0.985996557 1.105863687 0.941793218 1 14.60083445 -5.883902376 1.313002616 1.000628227 1.517566894 0.895312414 0.071015185 0.130636466 0.455576346 0.024418315 0.051845225 1.31E-06 5.883902376 0.516938667 S(ph)VGDGETVEFDVVEGEK ddPTM_A459_MK2206_30min_R1 3 SVGDGETVEFDVVEGEK 17 0 H0Y449;P67809;A0A0D9SEI8;Q9Y2T7;P16989-2;P16989;P16989-3 H0Y449;P16989-2 YBX1;YBX3;YBX2 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 1 S(1)VGDGETVEFDVVEGEK;S(1)VGDGETVEFDVVEGEK;S(1)VGDGETVEFDVVEGEK 323.47 7.62E-119 24671800 5059.8 5329.03 4676.96 3282.9 4819.3 4405.9 4218.9 3682.35 3237.75 3159.48 TRUE FALSE 4629.43744 4982.109178 4359.500986 3535.749527 4627.337076 4655.35825 3937.464879 3650.155602 3574.325699 3550.900235 1.303736273 1.403055239 1.227717113 0.995733277 1.303144772 1.311036059 1.108863842 1.02795217 1.006597049 1 11.79396911 -6.092036341 0.237032982 0.944066079 1.494942098 0.499110353 0.105692183 5.343829032 0.468484306 0.220842785 0.877657507 8.09E-07 6.092036341 0.550876019 S(ph)VGDGETVEFDVVEGEK ddPTM_A459_MK2206_30min_R2 2 SVGDGETVEFDVVEGEK 17 0 H0Y449;P67809;A0A0D9SEI8;Q9Y2T7;P16989-2;P16989;P16989-3 H0Y449;P16989-2 YBX1;YBX3;YBX2 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 1 S(1)VGDGETVEFDVVEGEK;S(0.877)VGDGET(0.123)VEFDVVEGEK 178.02 2.77E-09 0 9985.7 10622.6 10425.2 9071.7 9586.9 7229.1 8939 8297.8 8871.9 8932.5 TRUE FALSE 10750.21287 10095.09713 10772.77096 8330.513091 9210.470136 7504.208466 7765.298562 9382.350951 9643.561825 8641.033257 1.24408882 1.168274306 1.246699399 0.964064464 1.065899165 0.86843879 0.898653938 1.085790399 1.116019524 1 13.07698812 -5.761398497 24.99999998 0.9964742 1.214546222 0.635363248 0.076263162 0.740157023 451736.8038 0.022779575 0.036429529 1.73E-06 5.761398497 0.218072021 S(ph)VGGSGGGSFGDNLVTR ddPTM_A459_MK2206_30min_R2 3 SVGGSGGGSFGDNLVTR 17 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.959)VGGS(0.041)GGGSFGDNLVTR;S(0.997)VGGS(0.003)GGGSFGDNLVTR;S(0.92)VGGS(0.079)GGGS(0.001)FGDNLVTR 165.16 2.26E-06 35080700 29145.6 34220.9 29837.7 38942.5 31175.9 38561 34318.8 26112.6 25986.1 31686.7 TRUE FALSE 31377.00955 32521.53987 30832.47403 35760.77318 29951.77752 40028.46588 29812.70034 29525.60648 28246.32401 30652.76557 1.023627361 1.060965928 1.005862716 1.166641003 0.977131328 1.305868007 0.972594145 0.963228144 0.921493493 1 14.90372962 -7.485741994 24.99849318 0.958998496 1.087889677 0.319965657 0.089817777 656.8252801 442141.1401 0.036231057 0.024419072 3.27E-08 7.485741994 0.128891181 S(ph)VHREESCSDSGTK ddPTM_A459_MK2206_30min_R1 1 SVHREESCSDSGTK 14 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 S(1)VHREESCSDSGTK 68.123 0.035358 3588500 1131.1 927.03 806.72 1397.6 817.33 1050.2 1344.8 1353.7 292.83 596.09 TRUE FALSE 1034.894005 866.6801785 751.9620941 1505.243394 784.7740154 1109.661416 1255.090846 1341.864744 323.2707264 669.9381294 1.544760568 1.293671968 1.122435134 2.246839414 1.171412674 1.656364025 1.87344292 2.002968162 0.482538181 1 9.387884055 -8.267169918 24.99956455 0.741269032 1.603328361 0.483541639 0.360638811 436.9022439 1905962.429 0.316607173 0.090569296 5.41E-09 8.267169918 0.862059329 S(ph)VHREESCSDSGTK ddPTM_A459_MK2206_30min_R2 2 SVHREESCSDSGTK 14 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 S(1)VHREESCSDSGTK;S(1)VHREESCSDSGTK 99.663 0.0052436 17577900 31624.1 29156.8 32758.6 39374 38846.8 31384.9 44693.2 34753.7 34569.1 37307.2 TRUE FALSE 34045.26541 27708.91571 33850.75537 36157.01825 37321.47944 32579.27436 38824.92915 39296.12792 37575.85783 36089.86912 0.943346879 0.767775456 0.937957277 1.001860609 1.034126206 0.90272631 1.075784704 1.088840965 1.041174677 1 15.13930629 -5.600324785 3.103084042 1.022956226 0.85395943 0.528152039 0.062463055 0.184021628 3.547034946 0.017790993 0.035018315 2.51E-06 5.600324785 -0.168996796 S(ph)VIDPVPAPVGDSHVDGAAK ddPTM_A459_MK2206_30min_R2 2 SVIDPVPAPVGDSHVDGAAK 20 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 S(1)VIDPVPAPVGDSHVDGAAK;S(1)VIDPVPAPVGDSHVDGAAK 124.7 0.00015411 13772100 105934 149150 146305 143690 160897 131895 130474 103850 142082 112968 TRUE FALSE 114044.3885 141743.4279 151182.7357 131950.0674 154579.3753 136914.3566 113342.6071 117423.5516 154440.0355 109281.8634 1.043580196 1.29704439 1.383420185 1.207428783 1.414501643 1.252855253 1.037158441 1.074501733 1.413226593 1 16.73769446 -7.066724177 9.710466842 1.138234601 1.279609479 0.178835915 0.141140345 0.930572634 131.3683851 0.053142923 0.041204 8.58E-08 7.066724177 0.141374878 S(ph)VKEDSNLTLQEK ddPTM_A459_MK2206_30min_R2 1 SVKEDSNLTLQEK 13 1 P46940;H0YLE8 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 S(1)VKEDSNLTLQEK 73.252 0.028822 4401500 32165 35523 36692 29601 18379 13049 21175 16208 21616 24947 TRUE FALSE 34627.57713 33758.97948 37915.29297 27182.50361 17657.34811 13545.58884 18394.69706 18326.44125 23496.12061 24132.98143 1.434865279 1.398873138 1.571098584 1.126363259 0.73166874 0.56128949 0.762222319 0.759393998 0.973610354 1 14.55871854 -6.023254234 3.291749529 0.774737054 1.458530952 0.848448595 0.126729024 0.087541697 1.95720251 0.039373473 0.056640973 9.48E-07 6.023254234 0.683793898 S(ph)VLY(ph)FS(ph)IHRY(ph)EQGRFWPHLK ddPTM_A459_MK2206_30min_R2 1 SVLYFSIHRYEQGRFWPHLK 20 2 A0A2R8Y559 A0A2R8Y559 4 S(1)VLY(1)FS(1)IHRY(1)EQGRFWPHLK 42.382 0.04725 0 7595.5 6432.2 6781 7911.9 7508.2 7917.9 9233.6 6367.8 6137.9 7356.6 TRUE FALSE 8177.01732 6112.786301 7007.075156 7265.472461 7213.390342 8219.221233 8021.217228 7200.093324 6671.763447 7116.554744 1.149013478 0.858953036 0.984616209 1.020925535 1.01360709 1.154943864 1.127120849 1.011738627 0.937499069 1 12.79696326 -4.470681812 22.34184345 1.01909207 3.053863544 0.20404381 0.08004278 433.5742813 241508.3802 0.020850797 12803.46896 3.38E-05 4.470681812 2.034771474 S(ph)VMKPCLMTIAILMILAQK ddPTM_A459_MK2206_30min_R2 1 SVMKPCLMTIAILMILAQK 19 1 Q30KQ4 Q30KQ4 DEFB116 Beta-defensin 116 1 S(0.998)VMKPCLMT(0.002)IAILMILAQK 65.184 0.037403 0 4941.1 3374 3901.7 4422.4 5229 3483.5 4785.6 4088.2 3181.3 5113.8 TRUE FALSE 5319.394415 3206.452066 4031.780731 4061.075773 5023.683186 3616.067034 4157.244971 4622.541777 3458.003724 4946.937125 1.075290484 0.648169157 0.815005453 0.820927307 1.015513854 0.73097089 0.840367457 0.934425011 0.699019138 1 12.27231985 -10.72670911 4.824566305 1.000023131 0.839542511 0.119522676 0.128317325 3.00E-05 4.94E-06 0.116606586 0.028277177 1.88E-11 10.72670911 -0.160480619 S(ph)VPEDDGHALLAER ddPTM_A459_MK2206_30min_R1 2 SVPEDDGHALLAER 14 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 S(1)VPEDDGHALLAER;S(1)VPEDDGHALLAER 153.92 0.00023418 13615300 943.07 803.929 1139.3 805.05 1121.83 1430.75 1361.22 822.01 817.27 852.14 TRUE FALSE 862.8569442 751.593076 1061.96749 867.0550905 1077.145136 1511.757829 1270.415497 814.8232532 902.2281411 957.7095365 0.900958914 0.784781865 1.108861768 0.905342442 1.124709627 1.578513914 1.326514407 0.850804155 0.942068661 1 9.903444357 -6.308326235 5.773192472 1.16275337 0.927938497 0.196594146 0.206756994 0.360129815 29.97722907 0.071586555 0.082415862 4.92E-07 6.308326235 -0.234814872 S(ph)VPEDDGHALLAER ddPTM_A459_MK2206_30min_R2 2 SVPEDDGHALLAER 14 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 S(1)VPEDDGHALLAER;S(1)VPEDDGHALLAER 181.69 4.97E-05 13568800 17008.4 18627.5 17840.1 20341.2 19669.5 22016 21639.4 14986 17537.4 18477.3 TRUE FALSE 18310.57618 17702.48544 18434.88003 18679.25889 18897.1766 22853.83431 18798.12079 16944.72165 19062.77135 17874.38721 1.024403017 0.990382788 1.031357316 1.04502933 1.057220948 1.278580017 1.051679174 0.947988955 1.066485308 1 14.12560616 -5.843634717 2.235473981 1.07275253 1.009536288 0.075331118 0.080486739 0.82944077 8.450592994 0.026692748 0.047003015 1.43E-06 5.843634717 -0.063216242 S(ph)VPGTTLESFR ddPTM_A459_MK2206_30min_R1 1 SVPGTTLESFR 11 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(1)VPGTTLESFR 112.84 0.0074384 6989100 304.37 510.51 382.82 403.58 602.88 534.62 781.73 629.98 631.96 540.97 TRUE FALSE 278.4817332 477.2757062 356.835245 434.6638015 578.866013 564.8897224 729.582218 624.4721513 697.6545035 607.9894477 0.458037116 0.785006562 0.58691026 0.714919976 0.952098783 0.929111064 1.19999158 1.02711018 1.14747798 1 9.247902474 -6.377143663 1.220065984 1.091714968 0.608069757 0.811285492 0.098853502 0.182880995 0.562449513 0.03983996 0.051709965 4.20E-07 6.377143663 -0.483645212 S(ph)VPGTTLESFR ddPTM_A459_MK2206_30min_R2 3 SVPGTTLESFR 11 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(0.987)VPGT(0.01)T(0.003)LESFR;S(0.985)VPGT(0.012)T(0.004)LESFR;S(0.997)VPGT(0.002)TLESFR 100.09 0.016614 9475000 11811.4 12490.2 9379 10641.3 11774.7 16104.5 10513.1 12193.2 7590.7 12061.1 TRUE FALSE 12715.68987 11869.95483 9691.691179 9771.87175 11312.36611 16717.36803 9132.717342 13786.89311 8250.925365 11667.54729 1.089834011 1.017347908 0.830653687 0.837525789 0.969558197 1.432809108 0.78274526 1.181644501 0.707168795 1 13.51021369 -8.267125853 24.96986317 0.85358444 1.009899844 0.102639522 0.19306402 1237.119096 5432222.698 0.167024989 0.047943427 5.41E-09 8.267125853 0.156315403 S(ph)VPHLQK ddPTM_A459_MK2206_30min_R2 2 SVPHLQK 7 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 S(1)VPHLQK;S(1)VPHLQK 99.013 0.014213 5513400 54454 55548 62052 67154 45976 61363 59735 43253 55244 79818 TRUE FALSE 58623.04011 52789.56709 64120.78271 61667.30338 44170.75123 63698.21196 51891.72275 48906.31561 60049.02326 77213.5452 0.759232593 0.683682726 0.830434382 0.798659137 0.572059619 0.824961628 0.672054658 0.633390365 0.777700637 1 16.23656633 -8.550785846 21.64652143 1.000000003 0.722386509 0.52036903 0.079950554 1114.072867 864145.4791 0.076240943 0.019685327 2.81E-09 8.550785846 -0.277613493 S(ph)VPNTPLRPNQQSVVNSSFSELFVK ddPTM_A459_MK2206_30min_R1 2 SVPNTPLRPNQQSVVNSSFSELFVK 25 1 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 S(0.978)VPNT(0.02)PLRPNQQSVVNS(0.001)SFSELFVK;S(0.655)VPNT(0.329)PLRPNQQS(0.012)VVNS(0.003)S(0.001)FSELFVK 80.009 0.00011224 66324000 1884.19 2084.4 2549.7 2328.1 2262.4 2001.28 2080.04 2270.8 2042.67 2144.9 TRUE FALSE 1723.929746 1948.705181 2376.633468 2507.410665 2172.283817 2114.590744 1941.284327 2250.946635 2255.012856 2410.626405 0.715137668 0.808381248 0.985898712 1.040149009 0.901128359 0.877195545 0.805302855 0.933760051 0.935446841 1 11.23519237 -5.031524657 3.919570817 0.927903658 0.727234962 0.561831675 0.063309191 0.169226873 5.602682547 0.018039036 0.066759996 9.30E-06 5.031524657 -0.200668695 S(ph)VPNTPLRPNQQSVVNSSFSELFVK ddPTM_A459_MK2206_30min_R2 1 SVPNTPLRPNQQSVVNSSFSELFVK 25 1 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 S(0.794)VPNT(0.195)PLRPNQQS(0.01)VVNSSFSELFVK 60.829 0.0035215 13550000 8392 10057 10421 11413 10242 10252 13522 10496 9290.9 11529 TRUE FALSE 9034.497972 9557.584004 10768.43094 10480.52139 9839.847618 10642.14704 11746.54516 11867.86324 10099.00569 11152.80967 0.810064749 0.856966476 0.965535256 0.939720277 0.882275221 0.954212199 1.053236404 1.064114208 0.905512242 1 13.44511959 -2.743835281 0.354102294 1.006263256 8.52E-12 0.540805505 0.052873266 21.50482184 0.671730577 0.048324169 12.41486965 0.001803702 2.743835281 -1.006263256 S(ph)VPSIAAATGTHSR ddPTM_A459_MK2206_30min_R1 1 SVPSIAAATGTHSR 14 0 Q8IY63-2;Q8IY63 Q8IY63-2 AMOTL1 Angiomotin-like protein 1 1 S(0.74)VPS(0.26)IAAATGTHSR 85.45 0.016263 2689700 996.92 1127.3 1419.9 794.56 1362.1 1073.4 1334.3 1059.3 877.24 990.05 TRUE FALSE 912.126719 1053.912565 1323.521144 855.7571489 1307.844673 1134.17498 1245.291282 1050.038652 968.4322372 1112.704868 0.81973823 0.947162716 1.189462886 0.769078282 1.17537427 1.019295424 1.119156855 0.943681188 0.870340613 1 10.11985527 -4.870074777 4.176004319 1.013311567 0.819733949 0.177530115 0.124237167 0.352781227 10.03630242 0.030014349 0.160993299 1.35E-05 4.870074777 -0.193577618 S(ph)VPSIAAATGTHSR ddPTM_A459_MK2206_30min_R2 2 SVPSIAAATGTHSR 14 0 Q8IY63-2;Q8IY63 Q8IY63-2 AMOTL1 Angiomotin-like protein 1 1 S(0.977)VPS(0.023)IAAATGTHSR;S(0.985)VPS(0.015)IAAATGTHSR 130.64 0.00063155 10516700 32956 42989 32934.1 42574 33942 42108 34691 40999 37755 36307 TRUE FALSE 35479.1367 40854.22877 34032.10646 39095.56801 32609.26654 43710.44945 30136.03003 46357.71007 41038.86165 35122.30556 1.010159673 1.163198945 0.968959922 1.11312647 0.928448916 1.244521074 0.858031087 1.319893706 1.1684558 1 15.10009993 -7.776388949 24.99996858 1.183130947 1.049138176 0.150176816 0.129139848 399.1559204 667493.4265 0.064148819 0.031009173 1.67E-08 7.776388949 -0.133992771 S(ph)VPSSLQASAR ddPTM_A459_MK2206_30min_R1 1 SVPSSLQASAR 11 0 P83369 P83369 LSM11 U7 snRNA-associated Sm-like protein LSm11 1 S(0.994)VPS(0.003)S(0.003)LQASAR 81.676 0.041434 5612400 475.17 394.58 464.88 439.48 373.98 274.03 594.05 635.21 430.38 348.81 TRUE FALSE 434.7542963 368.8927703 433.3252408 473.3288257 359.0835847 289.5453418 554.4220084 629.6564259 475.1195411 392.0232162 1.109001402 0.940997255 1.105356068 1.207399986 0.915975304 0.738592333 1.414258099 1.606171267 1.211967867 1 8.614795285 -7.286589033 24.99865406 1.358613628 1.010077057 0.372032522 0.189636873 753.2116353 748685.9367 0.079533325 0.053644306 5.17E-08 7.286589033 -0.34853657 S(ph)VPTSTVFYPSDGVATEK ddPTM_A459_MK2206_30min_R1 1 SVPTSTVFYPSDGVATEK 18 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 1 S(0.788)VPT(0.166)S(0.035)T(0.011)VFYPSDGVATEK 164.93 2.56E-06 0 826 797.34 683.11 694.3 667.95 785.05 788.31 804.8 652.28 596.65 TRUE FALSE 755.7443625 745.4330211 636.7423965 747.7751063 641.3441371 829.4988526 735.7232783 797.7637184 720.0868402 670.5675065 1.127022045 1.111645008 0.949557487 1.115137699 0.956419944 1.237010211 1.097165119 1.189684425 1.073846903 1 9.389238766 -6.75674049 24.99993618 1.129998089 1.053093731 0.136133417 0.08303808 211.4468227 1124980.545 0.026535116 0.025707334 1.75E-07 6.75674049 -0.076904358 S(ph)VQAHEVHQK ddPTM_A459_MK2206_30min_R2 1 SVQAHEVHQK 10 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 S(1)VQAHEVHQK 71.513 0.046881 1436100 11299 10768 10381 14255 10159 11016 10186 12345 12784 9809.5 TRUE FALSE 12164.06013 10233.27678 10727.09736 13090.3209 9760.106615 11435.2216 8848.565964 13958.53389 13895.92921 9489.416818 1.281855393 1.078388375 1.130427461 1.379465267 1.028525441 1.205049985 0.932466782 1.470958032 1.464360717 1 13.21210371 -7.780223697 24.99931083 1.350744469 1.151168885 0.150780033 0.17061138 376.3619964 500878.1555 0.08837043 0.042565396 1.66E-08 7.780223697 -0.199575585 S(ph)VQEGENPDDGVR ddPTM_A459_MK2206_30min_R1 2 SVQEGENPDDGVR 13 0 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 S(1)VQEGENPDDGVR;S(1)VQEGENPDDGVR 242.1 5.88E-18 41808000 1306.57 1100.67 1031 1019.94 2356.99 1747.98 2203.75 1278.15 1051.91 1131.35 TRUE FALSE 1195.43936 1029.016183 961.0185925 1098.495956 2263.106097 1846.949117 2056.741858 1266.975269 1161.259809 1271.510179 0.940172859 0.809286626 0.755808808 0.863930131 1.779856846 1.452563375 1.617558311 0.996433446 0.913291791 1 10.3123273 -6.047525273 23.36333526 1.317702866 0.828735769 0.406735501 0.265988581 190.7578953 93775.72624 0.083675031 0.108029179 8.96E-07 6.047525273 -0.488967097 S(ph)VQEGENPDDGVR ddPTM_A459_MK2206_30min_R2 2 SVQEGENPDDGVR 13 0 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 S(1)VQEGENPDDGVR;S(1)VQEGENPDDGVR 236.75 1.34E-17 131232000 40306 40664 33099 42970 29403.5 34396 35071 40711 38580 42236 TRUE FALSE 43391.85835 38644.68489 34202.50414 39459.21355 28248.97085 35704.96388 30466.13557 46032.06748 41935.61866 40857.84278 1.062020298 0.945832728 0.837109887 0.965768402 0.691396533 0.873882747 0.745661873 1.126639694 1.026378678 1 15.31832541 -7.772568894 24.99993904 1.057381904 0.87226952 0.374042085 0.104495399 236.2119493 530588.3806 0.057506021 0.028028898 1.69E-08 7.772568894 -0.185112384 S(ph)VQPTSEER ddPTM_A459_MK2206_30min_R1 1 SVQPTSEER 9 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;Q9UHD8-3;K7EL40;K7EK18;K7EQD7;K7ER14;K7EIR4;Q9UHD8-8;Q9UHD8-4;K7EKN4;K7ELJ9;K7EJZ2;K7ER52;K7ENQ5;Q9UHD8-9;K7EN52;K7EIE4 Q9UHD8 Sep-09 Septin-9 1 S(1)VQPTSEER 141.71 0.0021829 5458400 1138.3 1429.5 1495.4 1260.4 1587.8 1320.7 1797 1461.1 949.08 1140.2 TRUE FALSE 1041.481608 1336.43929 1393.896414 1357.476226 1524.554564 1395.476893 1677.125409 1448.325757 1047.740262 1281.456584 0.812732652 1.042906414 1.087743769 1.059322839 1.189704421 1.088977114 1.308764908 1.130218358 0.817616668 1 10.32356889 -4.473415425 1.617820328 1.102785365 0.459358544 0.305231745 0.120399631 2.949738882 3.942897719 0.03367794 3.800608965 3.36E-05 4.473415425 -0.643426821 S(ph)VQPTSEER ddPTM_A459_MK2206_30min_R2 1 SVQPTSEER 9 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;Q9UHD8-3;K7EL40;K7EK18;K7EQD7;K7ER14;K7EIR4;Q9UHD8-8;Q9UHD8-4;K7EKN4;K7ELJ9;K7EJZ2;K7ER52;K7ENQ5;Q9UHD8-9;K7EN52;K7EIE4 Q9UHD8 Sep-09 Septin-9 1 S(0.999)VQPTS(0.001)EER 80.69 0.045769 8706700 22101 26955 31870 37744 32122 28833 38686 28531 29848 34855 TRUE FALSE 23793.06955 25616.4539 32932.52989 34660.19446 30860.72888 29930.26002 33606.48173 32260.09966 32444.12509 33717.6842 0.705655507 0.75973349 0.976713872 1.027952995 0.915268341 0.88767247 0.996701954 0.956770918 0.962228749 1 15.04121783 -5.199964748 4.320548899 0.962968621 0.720674082 0.848561776 0.039489199 0.080044851 3.028695621 0.010819429 0.030901299 6.31E-06 5.199964748 -0.242294539 S(ph)VSEINSDDELSGK ddPTM_A459_MK2206_30min_R1 3 SVSEINSDDELSGK 14 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 S(0.609)VS(0.343)EINS(0.047)DDELS(0.001)GK;S(0.989)VS(0.011)EINSDDELSGK;S(0.787)VS(0.21)EINS(0.002)DDELSGK 292.76 8.13E-67 69338300 11989 13323.1 12578.5 10718.6 10394.5 9216.6 11243.1 10198.3 10024.2 9177.93 TRUE FALSE 10969.27259 12455.76377 11724.70647 11544.14843 9980.465054 9738.435927 10493.09331 10109.13734 11066.25146 10314.96126 1.063433232 1.207543437 1.136669947 1.119165467 0.967571744 0.944107853 1.01726929 0.980046079 1.072835 1 13.33245078 -6.18592522 5.020064091 0.994456125 1.140066903 0.676506549 0.045601433 0.124269345 5.747163518 0.013527799 0.017549866 6.52E-07 6.18592522 0.145610778 S(ph)VSEINSDDELSGK ddPTM_A459_MK2206_30min_R2 1 SVSEINSDDELSGK 14 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 S(0.973)VS(0.011)EINS(0.017)DDELSGK 270.07 2.53E-44 8314900 42160 48724 46835 43500 49811 38292 49022 36093 38876 51625 TRUE FALSE 45387.80202 46304.43701 48396.45552 39945.91085 47855.16986 39749.22889 42585.35251 40810.47903 42257.36421 49940.48048 0.908837912 0.927192461 0.969082697 0.799870375 0.958244082 0.795932048 0.852722123 0.817182347 0.846154538 1 15.60792208 -5.749273202 24.99945097 0.859766542 0.934253165 0.184820697 0.064017863 332.3392012 682895.3766 0.016373421 0.028090098 1.78E-06 5.749273202 0.074486623 S(ph)VSGFLHFDTATK ddPTM_A459_MK2206_30min_R1 2 SVSGFLHFDTATK 13 0 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 1 S(0.848)VS(0.152)GFLHFDTATK;S(0.81)VS(0.19)GFLHFDTATK 92.269 0.012355 22703000 15202.5 13455.6 12969.5 9936.4 13661.1 13782.7 15747.1 11414 14010.9 15118.4 TRUE FALSE 13909.44754 12579.63799 12089.16648 10701.70325 13116.94946 14563.06456 14696.63969 11314.2086 15467.38319 16991.38153 0.81861781 0.740354042 0.711488142 0.629831261 0.77197663 0.857085372 0.864946718 0.665879262 0.910307568 1 14.05251554 -6.566553204 5.281031527 0.837854629 0.722293751 0.322987421 0.089767972 0.263401267 17.26639299 0.029552155 0.029932251 2.71E-07 6.566553204 -0.115560878 S(ph)VSGFLHFDTATK ddPTM_A459_MK2206_30min_R2 2 SVSGFLHFDTATK 13 0 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 1 S(0.88)VS(0.12)GFLHFDTATK;S(0.999)VS(0.001)GFLHFDTATK 114.31 0.0042708 11621300 65201 67930 70485 68908 79468 64040 69352 47959.5 50761 82732 TRUE FALSE 70192.83869 64556.69498 72834.93472 63277.99597 76347.68703 66477.08707 60245.99909 54227.97132 55176.10003 80032.46162 0.877054601 0.80663138 0.910067406 0.790654126 0.953959 0.830626545 0.752769537 0.677574702 0.689421504 1 16.28829766 -7.161950977 4.191213138 0.753142554 0.864507688 0.133852497 0.094879575 0.34114781 10.44856399 0.035790885 0.027158389 6.89E-08 7.161950977 0.111365134 S(ph)VSGSPEPAAK ddPTM_A459_MK2206_30min_R1 2 SVSGSPEPAAK 11 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.891)VS(0.094)GS(0.015)PEPAAK;S(0.998)VS(0.002)GSPEPAAK 156.14 0.0011546 6648800 6494.9 7414.8 7588.4 5575.3 6777.1 6577.1 6936.2 6780.2 6068.6 6451.8 TRUE FALSE 5942.474649 6932.095172 7073.32055 6004.710572 6507.153756 6949.489718 6473.498754 6720.921426 6699.452687 7251.097693 0.819527594 0.956006313 0.975482727 0.82811056 0.897402577 0.958405198 0.892761211 0.926883309 0.923922552 1 12.8239837 -14.52287875 0.188866662 1.386114925 0.894348568 0.264803695 0.048547279 204.8896431 1.994999163 29.65675795 0.135212814 3.00E-15 14.52287875 -0.491766357 S(ph)VSLLNACK ddPTM_A459_MK2206_30min_R2 1 SVSLLNACK 9 0 G3V538;F8W717;A0A3B3IU69;O00423-3 G3V538 EML1 Echinoderm microtubule-associated protein-like 1 1 S(0.919)VS(0.081)LLNACK 121.36 0.0062865 4732800 19410 24800 24892 24531 24151 20681 22777 17648 17921 23599 TRUE FALSE 20896.04452 23568.46806 25721.88686 22526.73883 23202.71039 21468.02995 19786.35254 19954.65419 19479.73619 22828.96656 0.915330287 1.032393122 1.126721474 0.986761217 1.016371474 0.940385536 0.866721342 0.874093627 0.85329032 1 14.47857793 -6.899063448 2.687824328 0.88828234 1.022555543 0.4403644 0.061853817 0.236087227 3.456156651 0.024342933 0.020818368 1.26E-07 6.899063448 0.134273203 S(ph)VSPCSNVESR ddPTM_A459_MK2206_30min_R1 1 SVSPCSNVESR 11 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.641)VS(0.342)PCS(0.017)NVESR 131.08 0.0022707 18310000 8858 8170.2 7565.4 6489 6758.6 6561.9 7695.7 7631.9 5024.4 6118.9 TRUE FALSE 8104.580585 7638.318495 7051.881726 6988.783904 6489.39065 6933.429107 7182.333895 7565.175103 5546.70436 6876.955527 1.178512868 1.110712213 1.025436576 1.01626132 0.943642957 1.008212003 1.044406041 1.1000762 0.806563942 1 12.7475543 -5.059961444 1.441635331 0.992993106 1.206654675 0.436456873 0.072088746 0.714957861 1.962454135 0.020933916 0.190419919 8.71E-06 5.059961444 0.213661569 S(ph)VSPQNSDSSGFADVNGWHLR ddPTM_A459_MK2206_30min_R2 1 SVSPQNSDSSGFADVNGWHLR 21 0 S4R3E2;Q9UKB3 S4R3E2 DNAJC12 DnaJ homolog subfamily C member 12 1 S(0.5)VS(0.5)PQNSDSSGFADVNGWHLR 153.31 5.50E-07 8636200 13104 12282 11287 11966 10799 9305 13449 9602.3 11439 14301 TRUE FALSE 14107.25232 11672.09374 11663.30295 10988.33952 10374.977 9659.108295 11683.13014 10857.35358 12433.94354 13834.35954 1.019725725 0.843703223 0.843067792 0.794278874 0.749942704 0.698196998 0.844500977 0.784810713 0.898772618 1 13.75596824 -4.431252283 1.636748528 0.810096787 1.318667974 0.328573984 0.079512242 2.96549972 3.656878175 0.021224077 3.167266961 3.70E-05 4.431252283 0.508571187 S(ph)VSPTFLNPSDENLK ddPTM_A459_MK2206_30min_R1 1 SVSPTFLNPSDENLK 15 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 S(0.675)VS(0.325)PTFLNPSDENLK 332.39 3.40E-127 63021000 4923.1 5534.2 5632.9 4834.2 4773.9 4075.9 5234.6 4688.2 4568 4316.9 TRUE FALSE 4504.364493 5173.922574 5250.554442 5206.530922 4583.745454 4306.673936 4885.409385 4647.211562 5042.859947 4851.710163 0.92840758 1.066412131 1.082206947 1.073133132 0.94476902 0.887661008 1.006945844 0.957850202 1.039398434 1 12.24427765 -6.264705472 24.97593606 0.968116528 1.042792747 0.24163129 0.055538129 372.3737197 2847541.254 0.017401796 0.020555914 5.44E-07 6.264705472 0.074676218 S(ph)VSQDLIK ddPTM_A459_MK2206_30min_R1 2 SVSQDLIK 8 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(1)VSQDLIK;S(0.989)VS(0.011)QDLIK 108.9 0.012678 38628000 6970.8 8443.3 6973.1 5508 5248.3 4694 5492.9 4849.2 5335.6 4780.6 TRUE FALSE 6377.896855 7893.639635 6499.7854 5932.227114 5039.249098 4959.770224 5126.478663 4806.803956 5890.254714 5372.85682 1.187058779 1.469169922 1.209744763 1.104110404 0.937908689 0.923116024 0.954143919 0.894645831 1.09629847 1 12.39147368 -5.826486372 2.067303332 0.960562043 1.328504026 0.74422371 0.084919293 0.139835214 1.220196222 0.02480841 0.04544856 1.49E-06 5.826486372 0.367941983 S(ph)VSQDLIK ddPTM_A459_MK2206_30min_R2 4 SVSQDLIK 8 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(0.997)VS(0.003)QDLIK;S(1)VSQDLIK;S(0.996)VS(0.004)QDLIK;S(0.991)VS(0.009)QDLIK 115.91 0.0096084 77530000 301611 268066 278653 255249 199596 173132 230767 170361 174581 198528 TRUE FALSE 324702.5701 254754.2322 287943.1519 234394.3402 191758.8582 179720.6596 200467.0157 192627.7676 189765.7398 192050.0476 1.690718508 1.326499188 1.499313098 1.220485718 0.998483783 0.935801172 1.043826951 1.003008174 0.988105664 1 17.5511228 -5.964852221 2.110119456 0.991557043 1.501837789 0.87495254 0.086379736 0.100882782 0.906499326 0.026222045 0.042379255 1.08E-06 5.964852221 0.510280746 S(ph)VSSFPVPQDNVDTHPGSGK ddPTM_A459_MK2206_30min_R2 2 SVSSFPVPQDNVDTHPGSGK 20 0 Q676U5-4;Q676U5-3;Q676U5;C9JAY7;E7EVC7;Q676U5-5;Q676U5-2 Q676U5-4 ATG16L1 Autophagy-related protein 16-1 1 S(0.905)VS(0.056)S(0.038)FPVPQDNVDTHPGSGK;S(0.93)VS(0.067)S(0.003)FPVPQDNVDTHPGSGK 131.26 0.0001044 25873000 118099 158272 130858 150347 120545 113415 129623 88631 100184 118558 TRUE FALSE 127140.7502 150412.4426 135220.7404 138063.1692 115811.7976 117731.0873 112603.3444 100215.376 108897.8232 114689.4622 1.108565232 1.3114757 1.179016257 1.203799953 1.009785864 1.026520528 0.981810728 0.873797593 0.94950156 1 16.80737332 -6.421907971 1.374033105 0.946653182 1.219291553 0.768701555 0.060925754 0.183226801 0.705865471 0.024121426 0.029352329 3.79E-07 6.421907971 0.272638371 S(ph)VSSPTSSNTPTPTK ddPTM_A459_MK2206_30min_R2 1 SVSSPTSSNTPTPTK 15 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 S(1)VSSPTSSNTPTPTK 260.08 2.28E-36 6584000 44008 83108 41423 64389 50625 70618 46366 41547 61660 40374 TRUE FALSE 47377.28632 78980.97757 42804.02215 59128.21273 48637.20813 73305.41747 40278.0885 46977.33555 67023.07534 39056.59969 1.213041757 2.022218478 1.095948508 1.513910919 1.245300628 1.87690219 1.031274838 1.202801471 1.716049935 1 15.25327873 -13.154424 0.198064762 1.21E-12 1.511489147 0.125908259 0.325611857 156.8645267 2.515017435 65.35132841 0.798585338 7.01E-14 13.154424 1.511489147 S(ph)VSSSPWLPQDGFDPSDYAEPMDAVVKPR ddPTM_A459_MK2206_30min_R1 1 SVSSSPWLPQDGFDPSDYAEPMDAVVKPR 29 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 S(0.846)VS(0.089)S(0.03)S(0.036)PWLPQDGFDPSDYAEPMDAVVKPR 106.84 8.11E-11 15907000 1802.3 1620.5 1603.1 1243.5 1671 1084.5 1025.5 842.63 1065 749.14 TRUE FALSE 1649.004921 1515.005155 1494.286038 1339.274585 1604.440532 1145.903453 957.0907661 835.2629747 1175.710561 841.9491189 1.958556501 1.79940227 1.774793755 1.590683517 1.905626475 1.361012711 1.136756064 0.992058731 1.396415216 1 9.71758924 -6.932846808 3.495219007 1.138083838 1.791600207 0.839989467 0.139573311 0.091677551 2.264908904 0.052124366 0.044523756 1.17E-07 6.932846808 0.653516369 S(ph)VSSSPWLPQDGFDPSDYAEPMDAVVKPR ddPTM_A459_MK2206_30min_R2 1 SVSSSPWLPQDGFDPSDYAEPMDAVVKPR 29 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 S(0.652)VS(0.209)S(0.069)S(0.069)PWLPQDGFDPSDYAEPMDAVVKPR 72.009 0.00011588 7756700 13808 14451 15877 15803 12286 12716 9910.7 9108 8349.9 7800.4 TRUE FALSE 14865.1511 13733.38435 16406.33126 14511.84435 11803.58991 13199.91629 8609.413185 10298.44687 9076.159209 7545.873587 1.969970862 1.819986009 2.174212312 1.923149677 1.564244321 1.749289348 1.140943204 1.364778611 1.202797675 1 12.88147222 -7.001817358 0.805122276 1.11100141 2.000875348 0.841471888 0.150352971 0.243696428 0.329376033 0.110803911 0.083545773 9.96E-08 7.001817358 0.889873938 S(ph)VSSSSYR ddPTM_A459_MK2206_30min_R1 3 SVSSSSYR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.978)VS(0.014)S(0.004)S(0.004)SYR;S(0.966)VS(0.028)S(0.005)S(0.002)SYR;S(0.982)VS(0.016)S(0.001)S(0.001)SYR 108.43 0.012878 294662000 2782.87 3125.9 3218.69 2950.09 3415.65 2683.9 3225.43 2941.15 2180.3 2180.69 TRUE FALSE 2546.172293 2922.403342 3000.214291 3177.306443 3279.597428 2835.860099 3010.26745 2915.435836 2406.949987 2450.850341 1.03889342 1.192403834 1.224152385 1.296409818 1.338146754 1.157092317 1.228254292 1.18956094 0.982087705 1 11.25906667 -8.226269446 4.584863448 0.987733897 1.215907495 0.567416188 0.075779349 0.143092326 7.183443237 0.062918598 0.020566392 5.94E-09 8.226269446 0.228173598 S(ph)VSSSSYR ddPTM_A459_MK2206_30min_R2 3 SVSSSSYR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.984)VS(0.006)S(0.002)S(0.009)SYR;S(0.999)VS(0.001)SSSYR;S(0.998)VS(0.002)SSSYR 105.2 0.014257 321867000 224431 333146 337029 329144 349597 319533 262116 301719 291957 241220 TRUE FALSE 241613.6099 316602.4541 348265.3786 302251.8823 335870.0652 331693.0522 227699.8543 341154.7093 317350.8921 233349.0112 1.035417329 1.356776498 1.492465629 1.295278179 1.439346426 1.421446144 0.975790955 1.461993379 1.359983874 1 17.83212983 S(ph)VSTLKPCAK ddPTM_A459_MK2206_30min_R1 1 SVSTLKPCAK 10 1 A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;F8VZV1 A0A286YFF8 MON2 Protein MON2 homolog 1 S(0.999)VS(0.001)TLKPCAK 122.33 0.021361 8610200 1784.8 1884.4 2241.2 1565.5 2090.4 1718.2 1653.5 1646.2 1883.1 1629.2 TRUE FALSE 1632.993388 1761.725217 2089.073588 1686.075081 2007.134942 1815.482999 1543.198032 1631.807447 2078.854984 1831.037596 0.891840447 0.962145846 1.140923372 0.9208304 1.096173528 0.991505037 0.842799752 0.891192759 1.135342599 1 10.8384457 -10.70199801 15.95138914 1.000033312 0.984230351 0.00153157 0.100833324 0 0 0.09815594 0.023806312 1.99E-11 10.70199801 -0.015802961 S(ph)VSVDSGEQR ddPTM_A459_MK2206_30min_R1 1 SVSVDSGEQR 10 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 S(0.5)VS(0.5)VDSGEQR 137.01 0.0028604 0 3538 2728.8 3049.8 2365.3 2610.7 1814.3 1724.4 1645.4 1429.8 1419.6 TRUE FALSE 3237.074521 2551.154624 2842.788073 2547.475816 2506.710291 1917.024098 1609.368422 1631.014441 1578.432827 1595.470765 2.028914971 1.598998038 1.781786376 1.596692256 1.571141474 1.20154135 1.008710694 1.022277861 0.989321059 1 10.63976646 -6.704248585 1.10898819 0.97476072 1.789079521 0.913859659 0.106174128 0.126171641 0.33069776 0.052792771 0.05047013 1.98E-07 6.704248585 0.814318801 S(ph)VTEQGAELSNEER ddPTM_A459_MK2206_30min_R1 1 SVTEQGAELSNEER 14 0 E7EX29;P63104;E7ESK7;E5RGE1;E5RIR4;E9PD24;E7EVZ2 E7EX29 YWHAZ 14-3-3 protein zeta/delta 1 S(0.997)VT(0.003)EQGAELSNEER 116 0.0036246 0 533.16 580.7 620.22 597.61 713.63 550.31 476.04 533.81 422.98 466.62 TRUE FALSE 487.8119423 542.8963245 578.1211944 643.6380257 685.204606 581.4680766 444.2842402 529.1429554 466.9502846 524.4284084 0.930178332 1.035215323 1.102383443 1.227313424 1.306574158 1.108765405 0.847178057 1.008989877 0.890398531 1 9.034602029 -7.172133824 7.132511263 0.937861944 1.12847375 0.418090675 0.104774567 0.282801136 19.55220702 0.044136125 0.034117148 6.73E-08 7.172133824 0.190611806 S(ph)VTLLIK ddPTM_A459_MK2206_30min_R1 1 SVTLLIK 7 0 P40227;P40227-2 P40227 CCT6A T-complex protein 1 subunit zeta 1 S(0.993)VT(0.007)LLIK 89.698 0.030622 2622600 2724.2 3213.8 3629.1 2969.1 2921.2 3087.9 2977.8 3290.9 3035.5 2550.1 TRUE FALSE 2492.492485 3004.581036 3382.766803 3197.780596 2804.842418 3262.734229 2779.156395 3262.128008 3351.051088 2866.02564 0.869668593 1.048344088 1.180298863 1.115754357 0.978652242 1.138417669 0.969689997 1.138206149 1.169232766 1 11.4848358 -4.786934174 4.040491078 1.087634864 0.852021342 0.432126131 0.074029255 0.205085395 6.340797016 0.018348956 0.138923255 1.63E-05 4.786934174 -0.235613522 S(ph)VTLLIK ddPTM_A459_MK2206_30min_R2 1 SVTLLIK 7 0 P40227;P40227-2 P40227 CCT6A T-complex protein 1 subunit zeta 1 S(0.999)VT(0.001)LLIK 109.48 0.015825 1493200 15554 16383 14941 20368 17307 17682 19212 15772 15993 16968 TRUE FALSE 16744.8262 15569.44404 15439.12548 18703.86925 16627.44022 18354.9009 16689.44132 17833.45455 17384.04223 16414.33555 1.020134269 0.948527219 0.940587905 1.139483788 1.012982839 1.118223814 1.016760092 1.086456074 1.059076816 1 14.00266873 -5.742149138 24.99742565 1.063890559 0.967627516 0.447453505 0.046847238 199.4610351 258471.2672 0.011747115 0.020308148 1.81E-06 5.742149138 -0.096263043 S(ph)VTPDSLGHTPPAR ddPTM_A459_MK2206_30min_R2 1 SVTPDSLGHTPPAR 14 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.58)VT(0.419)PDS(0.001)LGHTPPAR 106.19 0.0037045 11358000 22476 33905 26548 53070 33986 38578 33159 20655 20198 19536 TRUE FALSE 24196.77984 32221.327 27433.09707 48734.01124 32651.53887 40046.11282 28805.18347 23354.67942 21954.78553 18898.54192 1.280351677 1.70496365 1.451598604 2.578718054 1.727727939 2.119005423 1.524201369 1.235792662 1.161718487 1 14.20598731 -7.656404981 2.73118184 1.123974661 1.821365394 0.444811818 0.338562408 0.267330973 3.998417465 0.200642674 0.099273309 2.21E-08 7.656404981 0.697390733 S(ph)VTPPEEQQEAEEPK ddPTM_A459_MK2206_30min_R1 2 SVTPPEEQQEAEEPK 15 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(0.992)VT(0.008)PPEEQQEAEEPK;S(0.937)VT(0.063)PPEEQQEAEEPK 256.8 3.43E-36 13197100 6475.3 6892 7119 5443.6 4589 3589.1 5074.7 5171.8 5307.1 5215.6 TRUE FALSE 5924.541732 6443.329547 6635.782115 5862.867015 4406.210413 3792.31174 4736.176022 5126.583498 5858.792037 5861.747904 1.010712475 1.09921642 1.132048362 1.000190918 0.751688828 0.646959201 0.807980162 0.874582732 0.999495736 1 12.51711521 -6.076638159 4.651125504 0.829683625 1.081024025 0.509620523 0.103971549 0.177177789 7.023943505 0.03310675 0.044175562 8.38E-07 6.076638159 0.251340401 S(ph)VTPPEEQQEAEEPK ddPTM_A459_MK2206_30min_R2 3 SVTPPEEQQEAEEPK 15 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(0.998)VT(0.002)PPEEQQEAEEPK;S(0.687)VT(0.313)PPEEQQEAEEPK;S(0.73)VT(0.27)PPEEQQEAEEPK 209.6 1.36E-06 34187000 188000 160676 159959 142950 138849 118214 163644 121305 105996 152051 TRUE FALSE 202393.4245 152697.0635 165291.9532 131270.5277 133397.0906 122712.7166 142157.3462 137159.98 115215.3405 147089.5883 1.37598743 1.038122856 1.123750193 0.892452887 0.90691049 0.834271943 0.966467769 0.932492786 0.783300448 1 17.1663356 -1.522878908 0.639375022 0.894743873 39.55190992 0.763294052 0.077894579 94.26055358 0.633216116 0.032001263 5144.805889 0.029999989 1.522878908 38.65716605 S(ph)VVADTDQK ddPTM_A459_MK2206_30min_R1 1 SVVADTDQK 9 0 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 S(1)VVADTDQK 110.08 0.011061 4532200 1990.1 1844.6 1702.2 1631.9 1961.1 1608.8 1888.7 1848 1300.8 1644.3 TRUE FALSE 1820.831545 1724.516205 1586.659407 1757.589221 1882.985234 1699.888866 1762.708269 1831.843131 1436.022815 1848.008298 0.985294031 0.933175574 0.858578075 0.951072148 1.018926829 0.919849152 0.953842183 0.991252655 0.777065134 1 10.85175552 -10.61810973 5.234157648 1.000001192 0.935113646 0.08394825 0.066613458 9.01E-07 1.56E-07 0.062722921 0.015212263 2.41E-11 10.61810973 -0.064887547 S(ph)VVGTPAYLAPEVLLNQGYNR ddPTM_A459_MK2206_30min_R1 2 SVVGTPAYLAPEVLLNQGYNR 21 0 Q9BZL6-2;Q9BZL6;Q9BZL6-3 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 S(0.999)VVGT(0.001)PAYLAPEVLLNQGYNR;S(0.709)VVGT(0.291)PAYLAPEVLLNQGYNR 187.75 1.38E-16 8538700 785.51 853.71 1096.36 679.75 899.39 837.54 817.44 888.43 768.63 600.04 TRUE FALSE 718.6982496 798.1333238 1021.942138 732.1044628 863.5653918 884.960791 762.9100691 880.6625502 848.5318391 674.3774853 1.065721002 1.183511225 1.515385908 1.085600393 1.280537104 1.312263251 1.131280456 1.305889608 1.258244615 1 9.397412561 -11.59750841 2.337255884 0.638334173 1.242052021 0.244175546 0.125190525 16800266.38 5788069.604 32342014.39 0.031309673 2.53E-12 11.59750841 0.603717848 S(ph)VVGTPAYLAPEVLLNQGYNR ddPTM_A459_MK2206_30min_R2 2 SVVGTPAYLAPEVLLNQGYNR 21 0 Q9BZL6-2;Q9BZL6;Q9BZL6-3 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 S(0.97)VVGT(0.03)PAYLAPEVLLNQGYNR;S(0.889)VVGT(0.111)PAYLAPEVLLNQGYNR 185.96 1.28E-16 21071800 20431.7 17166.6 16321.4 26299.5 20648.9 20890.1 22560.7 15688 8486.3 28445 TRUE FALSE 21995.96666 16314.13161 16865.54733 24150.74672 19838.12043 21685.08739 19598.45299 17738.47546 9224.423034 27516.84198 0.799363774 0.59287805 0.612917258 0.877671454 0.720944665 0.788065993 0.71223482 0.644640671 0.335228259 1 14.74802729 -7.792668049 4.678163105 0.613967234 0.727614243 0.014841202 0.170262745 0.540286289 27.55130014 0.090568456 0.043774603 1.61E-08 7.792668049 0.11364701 S(ph)VVGTPAYLAPEVLR ddPTM_A459_MK2206_30min_R2 4 SVVGTPAYLAPEVLR 15 0 O94806;H0Y5M6;Q15139;F8WBA3 O94806;Q15139 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 S(1)VVGTPAYLAPEVLR;S(1)VVGTPAYLAPEVLR;S(1)VVGTPAYLAPEVLR;S(1)VVGTPAYLAPEVLR 219.95 2.27E-09 30005300 28608.1 27643.1 29968.9 35849.6 30072.9 26785 27694 22959.6 21421.8 29375 TRUE FALSE 30798.35813 26270.38385 30968.04817 32920.573 28892.08684 27804.32194 24057.74453 25960.49855 23285.02944 28416.49616 1.083819693 0.924476533 1.089791225 1.158502189 1.01673643 0.978457083 0.846611926 0.913571413 0.819419443 1 14.79444106 -6.93944279 2.558769158 0.888314478 1.056729887 0.525199995 0.071417466 0.227217835 3.016258325 0.029088147 0.024168018 1.15E-07 6.93944279 0.168415408 S(ph)VVSDLEADDVK ddPTM_A459_MK2206_30min_R1 3 SVVSDLEADDVK 12 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.996)VVS(0.004)DLEADDVK;S(0.994)VVS(0.006)DLEADDVK;S(0.931)VVS(0.069)DLEADDVK 215.02 1.02E-06 136199000 9282.4 11206.8 9278.8 8433.6 6028.17 7311.2 7880.3 6891.86 11287.3 11058.5 TRUE FALSE 8492.883136 10477.23528 8648.980908 9083.157333 5788.055224 7725.153826 7354.619565 6831.605195 12460.65523 12428.51047 0.683338776 0.843000077 0.695898429 0.730832336 0.465707877 0.62156715 0.591753902 0.54967208 1.002586373 1 13.60136578 -8.271567356 24.78296052 1.001293295 0.649802389 0.677427902 0.09758474 437.0993882 1069560.12 0.09888647 0.026737934 5.35E-09 8.271567356 -0.351490906 S(ph)VVSDLEADDVK ddPTM_A459_MK2206_30min_R2 2 SVVSDLEADDVK 12 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.997)VVS(0.003)DLEADDVK;S(1)VVSDLEADDVK 173.59 0.00017743 12648600 33912 38288 31781 33455 28550 26949 47135 34396 27037 32878 TRUE FALSE 36508.32879 36386.6736 32840.56268 30721.61948 27428.98355 27974.56308 40946.11788 38891.6753 29388.62939 31805.19355 1.147873184 1.144048174 1.032553461 0.965930908 0.862405805 0.879559592 1.287403512 1.222808949 0.924019825 1 14.95697475 -10.20889961 15.35150767 0.999999996 1.052780019 0.012395738 0.138603511 0 0 0.146259972 0.035473254 6.18E-11 10.20889961 0.052780022 S(ph)VVSFDK ddPTM_A459_MK2206_30min_R1 4 SVVSFDK 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 S(0.689)VVS(0.311)FDK;S(0.958)VVS(0.042)FDK;S(0.88)VVS(0.12)FDK;S(0.991)VVS(0.009)FDK 113.62 0.014058 80748000 17774.5 19604.7 20589.2 17091.7 18845.8 16685.6 22393.1 19279.5 24747.2 26130.9 TRUE FALSE 16262.68544 18328.43047 19191.66247 18408.1057 18095.13188 17630.32425 20899.29716 19110.94136 27319.76 29368.19317 0.55375165 0.624091185 0.653484617 0.626804162 0.616147264 0.600320359 0.711630335 0.650736028 0.930249942 1 14.84196689 -8.30635759 2.496053588 1.005111271 0.626574291 0.926460806 0.038072621 0.067721498 0.784132122 0.036146297 0.010203713 4.94E-09 8.30635759 -0.37853698 S(ph)VVSFDK ddPTM_A459_MK2206_30min_R2 5 SVVSFDK 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 S(0.999)VVS(0.001)FDK;S(0.966)VVS(0.034)FDK;S(0.94)VVS(0.06)FDK;S(1)VVSFDK;S(0.517)VVS(0.483)FDK 124.08 0.0067823 108998400 483614 393321 481633 452308 401488 330264 485008 326773 271546 462717 TRUE FALSE 520639.8597 373789.2511 497690.4038 415352.9895 385723.5638 342832.4279 421325.867 369483.3531 295164.5802 447618.5822 1.163132811 0.835061961 1.111862697 0.927917218 0.861723751 0.765903029 0.941260894 0.825442392 0.659410918 1 18.7719104 -6.100262262 3.041669633 0.834069581 1.017361254 0.344883372 0.118091289 0.302770494 5.379048779 0.034877186 0.048147994 7.94E-07 6.100262262 0.183291672 S(ph)VWVAR ddPTM_A459_MK2206_30min_R2 1 SVWVAR 6 0 A0A087X2D0;P84103-2;P84103 A0A087X2D0 SRSF3 Serine/arginine-rich splicing factor 3 1 S(1)VWVAR 96.492 0.043817 0 5969.6 7472.2 7448.8 8217.6 7563.4 8003.7 6652.9 5830 6249.9 6349 TRUE FALSE 6426.637166 7101.141414 7697.139274 7546.195793 7266.422913 8308.286412 5779.366238 6592.001017 6793.505005 6141.83265 1.04637126 1.156192592 1.253231684 1.228655391 1.183103371 1.352737348 0.940983997 1.073295447 1.106103893 1 12.58445349 -7.273003405 24.9998758 1.036203793 1.203729912 0.509046364 0.083283421 684.9327332 1480727.238 0.035449664 0.024139518 5.33E-08 7.273003405 0.167526119 S(ph)VYVMMLRS(ph)WRER ddPTM_A459_MK2206_30min_R2 1 SVYVMMLRSWRER 13 2 C9JJN9;Q8N3P4-2;Q8N3P4-3;Q8N3P4 C9JJN9 VPS8 Vacuolar protein sorting-associated protein 8 homolog 2 S(1)VYVMMLRS(1)WRER 61.167 0.041748 0 1017.6 1995.7 4996.4 3884.7 1767 1761 4047.2 2424.9 4299.1 1415.3 TRUE FALSE 1095.508238 1896.59644 5162.977482 3567.307583 1697.618702 1828.016089 3515.797778 2741.842756 4673.027947 1369.118877 0.800155674 1.385267906 3.771022056 2.605549922 1.23993521 1.33517704 2.567927327 2.002633082 3.4131645 1 10.419032 -5.01237496 24.09112658 2.257124688 0.946432505 0.234097762 0.860087146 481.9245009 938214.9309 0.220914677 0.663604707 9.72E-06 5.01237496 -1.310692183 S(ph)WASPVYTEADGTFSR ddPTM_A459_MK2206_30min_R1 2 SWASPVYTEADGTFSR 16 0 E9PMS6;E9PJ10;Q8WWI1-3;E9PMP7;E9PK58;E9PLU6 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.983)WAS(0.017)PVYTEADGTFSR;S(1)WASPVYTEADGTFSR 241.39 1.50E-21 170127000 3330.4 3353.6 3119.4 2873.5 3696.3 3301.1 3905.9 3399.1 2558 2702.2 TRUE FALSE 3047.131991 3135.28003 2907.663819 3094.817468 3549.068544 3488.005429 3645.344538 3369.382027 2823.913254 3036.968937 1.003346447 1.032371452 0.95742297 1.019048114 1.168621944 1.148515346 1.200323287 1.109455545 0.929845946 1 11.56841644 -6.103049027 6.660954341 1.10612454 0.999132634 0.236960428 0.077337928 0.328068916 18.2238603 0.023636114 0.030722052 7.89E-07 6.103049027 -0.106991906 S(ph)WASPVYTEADGTFSR ddPTM_A459_MK2206_30min_R2 4 SWASPVYTEADGTFSR 16 0 E9PMS6;E9PJ10;Q8WWI1-3;E9PMP7;E9PK58;E9PLU6 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.998)WAS(0.002)PVYTEADGTFSR;S(0.98)WAS(0.019)PVY(0.001)TEADGTFSR;S(0.999)WAS(0.001)PVYTEADGTFSR;S(0.997)WAS(0.003)PVYTEADGTFSR 325.08 5.99E-118 63869000 52049.5 51515.8 47646.8 61815.3 62015.4 55007.9 55836 41448.2 50157.9 46903.7 TRUE FALSE 56034.44974 48957.60028 49235.32053 56764.79225 59580.36379 57101.26418 48504.66613 46865.62205 54520.54348 45373.23611 1.23496701 1.078997323 1.085118117 1.251063339 1.313116914 1.258478986 1.069014915 1.032891327 1.201601388 1 15.46955394 -7.276803203 24.36043994 1.078617834 1.199705489 0.353559748 0.084490863 798.4489589 1265991.771 0.038528007 0.026095488 5.29E-08 7.276803203 0.121087655 S(ph)WDQQIK ddPTM_A459_MK2206_30min_R2 2 SWDQQIK 7 0 E7EUV9;F8W8D3;Q14493;H0YAE8;Q14493-2 E7EUV9 SLBP Histone RNA hairpin-binding protein 1 S(1)WDQQIK;S(1)WDQQIK 86.882 0.034321 14283000 53256 66348 69405 63361 80326 52407 75557 59055 66463 67218 TRUE FALSE 57333.32031 63053.2548 71718.92806 58184.20362 77171.99763 54401.38511 65636.27514 66773.69127 72243.8316 65024.68216 0.881716271 0.969681861 1.102949306 0.894801815 1.18681084 0.836626698 1.009405551 1.026897619 1.11102168 1 15.98869982 -4.874691258 3.823306954 1.017485172 0.879942178 0.162144817 0.09655155 0.419159563 10.28521613 0.023032943 0.133550922 1.33E-05 4.874691258 -0.137542995 S(ph)WGQQAQEYQEQK ddPTM_A459_MK2206_30min_R1 4 SWGQQAQEYQEQK 13 0 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(1)WGQQAQEYQEQK;S(1)WGQQAQEYQEQK;S(1)WGQQAQEYQEQK;S(1)WGQQAQEYQEQK 209.33 8.56E-06 42692700 6539.3 8776.2 9008.1 7455.8 7543.44 7202.93 7062.63 7167 6671.05 6498.9 TRUE FALSE 5983.098196 8204.867785 8396.65527 8030.047008 7242.968811 7610.753672 6591.494839 7104.339675 7364.52952 7304.032796 0.819149963 1.123333919 1.149591671 1.09939909 0.991639689 1.04199336 0.902445953 0.972659882 1.008282647 1 12.83447753 -6.783312538 2.001421685 0.971555949 1.056585327 0.087516309 0.09120663 0.675350078 5.570992583 0.037640355 0.034045517 1.65E-07 6.783312538 0.085029378 S(ph)WGQQAQEYQEQK ddPTM_A459_MK2206_30min_R2 3 SWGQQAQEYQEQK 13 0 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(1)WGQQAQEYQEQK;S(1)WGQQAQEYQEQK;S(1)WGQQAQEYQEQK 260.07 1.09E-29 37521500 95716 114662 122763 122401 106997 87584 108985 79830.1 96195 103252 TRUE FALSE 103044.0906 108968.0518 126855.8571 112400.4468 102795.7602 90917.07049 94675.13859 90264.16817 104561.8672 99882.8957 1.031649011 1.090958077 1.27004585 1.125322268 1.029162796 0.910236631 0.947861372 0.903699953 1.046844572 1 16.60795003 -6.423186769 3.204466442 0.95543919 1.136734247 0.570189989 0.068239623 0.184927135 3.612109946 0.023433048 0.026453038 3.77E-07 6.423186769 0.181295056 S(ph)WHDVQVSSAYK ddPTM_A459_MK2206_30min_R2 2 SWHDVQVSSAYK 12 0 O43399-2;O43399-4;O43399-3;O43399-6 O43399-2 TPD52L2 Tumor protein D54 1 S(1)WHDVQVSSAYK;S(1)WHDVQVSSAYK 149.32 0.00057913 3961300 26266 31087 28838 28306 29557 25827 35586 24939 25692 25962 TRUE FALSE 28276.94516 29543.26478 29799.44453 25993.30925 28396.44367 26809.86458 30913.51545 28198.61293 27926.64372 25114.86207 1.125904856 1.176325982 1.186526307 1.034977185 1.130662935 1.067490019 1.230885337 1.122785897 1.111956882 1 14.61625373 -8.787735681 2.389684688 1.000064465 1.134759506 0.362492602 0.053253973 1.553301126 12.44510734 0.051740204 0.014020608 1.63E-09 8.787735681 0.134695041 S(ph)WHDVQVSSAYVK ddPTM_A459_MK2206_30min_R2 2 SWHDVQVSSAYVK 13 0 O43399;O43399-5;O43399-7;A0A087WYR3 O43399 TPD52L2 Tumor protein D54 1 S(1)WHDVQVSSAYVK;S(1)WHDVQVSSAYVK 153.94 0.00039814 11387000 58415 59851 49935 62283 61329 52434 61621 53758 47097 55330 TRUE FALSE 62887.29731 56878.88637 51599.80798 57194.27967 58920.91531 54429.41261 53530.08868 60784.35518 51193.41193 53524.58663 1.17492355 1.062668391 0.964039355 1.068560885 1.100819624 1.016904866 1.000102795 1.135634276 0.956446657 1 15.70791413 -4.791578776 4.101186668 1.036189511 1.185078 0.382906939 0.054545666 0.222906719 7.155475137 0.013204644 0.095126914 1.62E-05 4.791578776 0.148888488 S(ph)WHEESPFEK ddPTM_A459_MK2206_30min_R1 1 SWHEESPFEK 10 0 Q9BY84 Q9BY84 DUSP16 Dual specificity protein phosphatase 16 1 S(1)WHEESPFEK 130.56 0.0027579 4748400 909.11 776.02 899.68 911.44 1194.6 877.85 994.9 870.64 839.06 629.79 TRUE FALSE 831.7854206 725.500957 838.6122283 981.6392667 1147.016552 927.5531084 928.5320363 863.0280863 926.2832896 707.8131399 1.175148318 1.024989388 1.184793247 1.386862169 1.620507572 1.310449123 1.311832155 1.219288026 1.30865512 1 9.467224734 -5.580803735 4.822438951 1.329678371 1.100190203 0.238073329 0.148818858 0.244127106 11.62068403 0.041286718 0.074817711 2.63E-06 5.580803735 -0.229488168 S(ph)WHEESPFEK ddPTM_A459_MK2206_30min_R2 2 SWHEESPFEK 10 0 Q9BY84 Q9BY84 DUSP16 Dual specificity protein phosphatase 16 1 S(0.999)WHEES(0.001)PFEK;S(1)WHEESPFEK 129.82 0.0028839 6196100 27263 31672 28519 29721 36755 30838 37976 29372 27169 35158 TRUE FALSE 29350.27624 30099.21454 29469.80923 27292.69923 35311.81402 32011.5617 32989.70558 33211.02125 29532.11051 34010.79734 0.862969367 0.884989971 0.866483927 0.802471608 1.038253049 0.941217619 0.969977424 0.976484642 0.868315736 1 15.05370521 -6.254846436 24.97970596 0.963521255 0.857301323 0.591223374 0.045361028 388.9932703 1473838.811 0.013295673 0.016765161 5.56E-07 6.254846436 -0.106219931 S(ph)WITIPR ddPTM_A459_MK2206_30min_R1 2 SWITIPR 7 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 S(1)WITIPR;S(1)WITIPR 97.635 0.022374 11513500 5686.8 6129.7 5376.6 5188.3 5462.6 4979.3 5809 5321.9 4349.3 4508.9 TRUE FALSE 5203.107797 5730.655416 5011.651372 5587.903765 5245.013075 5261.223663 5421.492209 5275.371189 4801.425299 5067.496572 1.02676099 1.130865178 0.988979726 1.102695125 1.035030414 1.038229348 1.069856118 1.041021166 0.947494533 1 12.30705749 -8.138968244 5.145402981 0.974860653 1.056531451 0.403377283 0.039390567 0.201395811 7.402491605 0.025887285 0.009331672 7.26E-09 8.138968244 0.081670798 S(ph)WPASPR ddPTM_A459_MK2206_30min_R1 2 SWPASPR 7 0 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 S(1)WPASPR;S(1)WPASPR 94.309 0.024564 10890300 4275.5 3940.5 4412.4 3823.6 3883.6 3537.7 3914.3 3759.1 3911.8 3603.2 TRUE FALSE 3911.846273 3683.972734 4112.898582 4118.094335 3728.907988 3738.001517 3653.184189 3726.234585 4318.445609 4049.591619 0.965985374 0.909714628 1.015632925 1.016915957 0.920810872 0.923056414 0.902111752 0.920150706 1.066390396 1 11.98356071 -8.25889324 24.99133949 1.0331952 0.947045947 0.404962762 0.041890786 229.6757439 2254412.654 0.033941616 0.011485055 5.51E-09 8.25889324 -0.086149254 S(ph)WPASPR ddPTM_A459_MK2206_30min_R2 1 SWPASPR 7 0 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 S(1)WPASPR 93.143 0.026096 9764500 19331 27553 20931 26379 15681 20317 24467 21655 22661 18449 TRUE FALSE 20810.99622 26184.75809 21628.82909 24223.75132 15065.28515 21090.17767 21254.45351 24485.38285 24632.01282 17847.01064 1.166077426 1.467178936 1.211902067 1.357300212 0.844134934 1.181720463 1.190925132 1.371959895 1.380175835 1 14.12339482 -11.83432847 1.993541227 5.50E-05 1.239389602 0.161804787 0.164686873 3481494.151 425094.5548 15680511.41 0.042769493 1.46E-12 11.83432847 1.239334586 S(ph)WSPPPEVSR ddPTM_A459_MK2206_30min_R1 2 SWSPPPEVSR 10 0 Q9NR19;Q9NR19-2;F8WCJ4;C9JXD9;C9IYL0;B4DEH9;C9JY31 Q9NR19 ACSS2 "Acetyl-coenzyme A synthetase, cytoplasmic" 1 S(0.939)WS(0.061)PPPEVSR;S(0.556)WS(0.444)PPPEVSR 115.91 0.0064985 24203000 8333.4 8257.9 8986.8 6620.9 9492.6 7854.3 8884.3 8001.6 7484.1 6271.7 TRUE FALSE 7624.60057 7720.309209 8376.801055 7130.842865 9114.489641 8299.003678 8291.644557 7931.642855 8262.098977 7048.685545 1.081705308 1.095283533 1.188420309 1.011655694 1.293076501 1.177383163 1.176339121 1.125265527 1.172147477 1 12.78313853 -5.117458383 6.433364453 1.150494328 1.085065497 0.062086745 0.081371265 0.555140511 26.66736107 0.019844394 0.054236253 7.63E-06 5.117458383 -0.065428831 S(ph)WSPPPEVSR ddPTM_A459_MK2206_30min_R2 1 SWSPPPEVSR 10 0 Q9NR19;Q9NR19-2;F8WCJ4;C9JXD9;C9IYL0;B4DEH9;C9JY31 Q9NR19 ACSS2 "Acetyl-coenzyme A synthetase, cytoplasmic" 1 S(0.954)WS(0.046)PPPEVSR 144.55 0.00096832 30838000 93537 135310 106470 130550 131350 140770 124060 104780 119210 113090 TRUE FALSE 100698.2646 128590.7022 110019.6567 119883.6474 126192.539 146127.101 107770.773 118475.1058 129578.6703 109399.8826 0.920460445 1.175419015 1.005665217 1.095829763 1.153497939 1.335715337 0.985108672 1.082954597 1.184449812 1 16.73925166 -4.7504172 24.67863644 1.116084141 0.920459948 0.246112515 0.101075422 603.2140273 1350491.331 0.025136134 0.365033068 1.78E-05 4.7504172 -0.195624193 S(ph)WSSEEESNQATGTSR ddPTM_A459_MK2206_30min_R2 1 SWSSEEESNQATGTSR 16 0 F6UZG9;Q8NFZ0;Q8NFZ0-2 F6UZG9 FBXO18 F-box only protein 18 1 S(0.989)WS(0.011)SEEESNQATGTSR 261.17 3.76E-39 4895200 12747 11856 11792 11260 11860 10351 12605 9479.4 7043.1 13794 TRUE FALSE 13722.92012 11267.24828 12185.13939 10340.02198 11394.31681 10744.91456 10949.94836 10718.39013 7655.696107 13343.90291 1.028403775 0.84437427 0.913161575 0.774887381 0.853896861 0.805230271 0.820595626 0.803242515 0.573722408 1 13.70389308 -1.522878758 0.59064496 0.793544991 13.58655275 0.276132701 0.102347914 207.1758244 1.658334784 0.044821235 3410.700073 0.029999999 1.522878758 12.79300776 S(ph)WTSPK ddPTM_A459_MK2206_30min_R2 1 SWTSPK 6 0 O75494-2;O75494 O75494-2 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.963)WT(0.018)S(0.018)PK 110.31 0.046891 12968000 88997 66764 72106 64409 58772 48305 76651 58515 49829 83082 TRUE FALSE 95810.67875 63448.59684 74509.97805 59146.57867 56464.31597 50143.28062 66586.63163 66163.11141 54163.03635 80371.04114 1.192104487 0.789445999 0.927074939 0.73591903 0.702545533 0.623897363 0.828490345 0.823220783 0.673912339 1 16.29438815 -2.254191488 1.180476866 0.76651782 200 0.534420026 0.110671252 528.6165912 2.068900439 0.031934803 283631.6645 0.005569401 2.254191488 199.2334821 S(ph)YDNLTTACDNTVPLASR ddPTM_A459_MK2206_30min_R1 2 SYDNLTTACDNTVPLASR 18 0 Q13615-3;Q13615-2;Q13615;G5E953 Q13615-3 MTMR3 Myotubularin-related protein 3 1 S(0.986)YDNLT(0.001)T(0.003)ACDNT(0.01)VPLASR;S(1)YDNLTTACDNTVPLASR 263.19 7.02E-43 46303000 2979.4 2757.2 3247.1 2170.2 3277.8 3046.5 3654.6 2513.8 2809.5 2621 TRUE FALSE 2725.986385 2577.705779 3026.695899 2337.34918 3147.238285 3218.990197 3410.808302 2491.822112 3101.557579 2945.709268 0.925409176 0.875071348 1.027493084 0.793475855 1.068414429 1.09277254 1.157890339 0.845915834 1.052906888 1 11.52439933 -6.291393644 24.98287552 1.03751395 0.911922308 0.323274312 0.092616939 882.3378551 735897.3131 0.029012063 0.032900931 5.11E-07 6.291393644 -0.125591641 S(ph)YDNLTTACDNTVPLASR ddPTM_A459_MK2206_30min_R2 4 SYDNLTTACDNTVPLASR 18 0 Q13615-3;Q13615-2;Q13615;G5E953 Q13615-3 MTMR3 Myotubularin-related protein 3 1 S(0.423)YDNLT(0.276)T(0.018)ACDNT(0.274)VPLAS(0.009)R;S(1)YDNLTTACDNTVPLASR;S(1)YDNLTTACDNTVPLASR;S(1)YDNLTTACDNTVPLASR 197.05 2.50E-10 51644900 45658.7 53546.4 48124.8 56397 49051.3 45616.1 53488.8 39108.7 42232.6 48961.7 TRUE FALSE 49154.36518 50887.36364 49729.25681 51789.18469 47125.2995 47352.05265 46465.65631 44220.34137 45905.91521 47364.08374 1.037798291 1.074387165 1.049936004 1.093427353 0.994958538 0.999745987 0.981031462 0.933626028 0.969213623 1 15.53150586 S(ph)YDSSMESR ddPTM_A459_MK2206_30min_R1 1 SYDSSMESR 9 0 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 S(0.872)YDS(0.063)S(0.063)MES(0.001)R 113.44 0.0091106 21622000 3425.2 3334.5 3551.3 3239.5 3291 2570.4 3173.2 3523.6 1700.8 2575.5 TRUE FALSE 3133.868754 3117.423444 3310.24765 3489.006851 3159.912501 2715.933827 2961.521618 3492.793537 1877.604246 2894.572384 1.082670715 1.076989286 1.143605069 1.205361756 1.091668157 0.938284992 1.023129231 1.206669958 0.648663774 1 11.49913452 -7.655938826 0.830633786 0.902806541 1.115382816 0.257606444 0.132662342 0.910345202 1.162632189 0.1160403 0.053920741 2.21E-08 7.655938826 0.212576276 S(ph)YDSSMESR ddPTM_A459_MK2206_30min_R2 2 SYDSSMESR 9 0 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 S(0.992)YDS(0.003)S(0.004)MESR;S(0.982)YDS(0.009)S(0.009)MES(0.001)R 119.34 0.0069294 82688000 75132 115592 126989 119676 109300 132015 121386 91309 120246 93508 TRUE FALSE 80884.16369 109851.8694 131222.7499 109898.088 105008.3328 137038.9233 105447.8724 103243.3998 130704.7797 90456.84162 0.894174086 1.214411949 1.450666943 1.214922896 1.160866673 1.514964716 1.165725782 1.141355347 1.444940785 1 16.464942 -4.77945237 4.362622737 1.270740136 0.866763579 0.332560812 0.154590045 0.215070943 8.56150017 0.036816509 0.266695951 1.66E-05 4.77945237 -0.403976556 S(ph)YDVPPPPMEPDHPFYSNISK ddPTM_A459_MK2206_30min_R1 14 SYDVPPPPMEPDHPFYSNISK 21 0 P18669;Q8N0Y7 P18669 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 1 S(0.999)Y(0.001)DVPPPPMEPDHPFYSNISK;S(0.999)Y(0.001)DVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(0.996)Y(0.004)DVPPPPMEPDHPFYSNISK;S(0.996)Y(0.004)DVPPPPMEPDHPFYSNISK;S(0.975)Y(0.025)DVPPPPMEPDHPFYSNISK;S(0.942)Y(0.058)DVPPPPMEPDHPFYSNISK;S(0.998)Y(0.002)DVPPPPMEPDHPFYSNISK;S(0.997)Y(0.003)DVPPPPMEPDHPFYSNISK;S(0.997)Y(0.003)DVPPPPMEPDHPFYSNISK;S(0.996)Y(0.004)DVPPPPMEPDHPFYSNISK;S(0.999)Y(0.001)DVPPPPMEPDHPFYSNISK;S(0.984)Y(0.016)DVPPPPMEPDHPFYSNISK 194.97 1.06E-16 1028916800 64590.1 62817.8 63663.3 56627 67929.7 61533.1 66772.1 66483.7 54620.9 50344.3 TRUE FALSE 59096.37282 58728.3498 59342.01257 60988.42135 65223.91621 65017.05095 62317.85504 65902.44002 60298.93802 56581.33196 1.044450011 1.037945693 1.048791368 1.07788946 1.152746214 1.149090145 1.101385437 1.164738223 1.065703756 1 15.78803852 -5.960867097 3.633704116 1.115974423 1.043611651 0.247553585 0.046011668 0.256953857 7.1704323 0.012795291 0.019156906 1.09E-06 5.960867097 -0.072362772 S(ph)YDVPPPPMEPDHPFYSNISK ddPTM_A459_MK2206_30min_R2 15 SYDVPPPPMEPDHPFYSNISK 21 0 P18669;Q8N0Y7 P18669 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 1 S(0.999)Y(0.001)DVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(0.957)Y(0.043)DVPPPPMEPDHPFYSNISK;S(0.993)Y(0.007)DVPPPPMEPDHPFYSNISK;S(0.997)Y(0.003)DVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(0.872)Y(0.128)DVPPPPMEPDHPFYSNISK;S(0.951)Y(0.049)DVPPPPMEPDHPFYSNISK;S(0.984)Y(0.016)DVPPPPMEPDHPFYSNISK;S(0.981)Y(0.019)DVPPPPMEPDHPFYSNISK;S(0.994)Y(0.006)DVPPPPMEPDHPFYSNISK;S(0.997)Y(0.003)DVPPPPMEPDHPFYSNISK;S(0.648)Y(0.352)DVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK 162.98 8.93E-08 780062900 1635193 2066306 1864143 2130133 2305723 1930512 2370991 1676642.9 1932119.8 2034454 TRUE FALSE 1760384.633 1963696.249 1926292.597 1956094.32 2215188.73 2003978.987 2059677.034 1895785.884 2100172.088 1968069.933 0.894472602 0.997777679 0.978772433 0.993915047 1.125564033 1.018245822 1.04654667 0.963271606 1.067122694 1 20.90835006 -3.525975293 0.834160292 1.031239814 5.88E-10 0.454125232 0.043719096 15.13073336 1.592283604 0.015409573 23.14918566 0.000297869 3.525975293 -1.031239813 S(ph)YEDLTESEDGAASGDSHK ddPTM_A459_MK2206_30min_R1 2 SYEDLTESEDGAASGDSHK 19 0 A0A0A0MSQ9;Q86VX9-5;Q86VX9 A0A0A0MSQ9 MON1A Vacuolar fusion protein MON1 homolog A 1 S(0.999)YEDLT(0.001)ESEDGAASGDSHK;S(0.995)YEDLT(0.005)ESEDGAASGDSHK 351.15 1.94E-194 12596500 5707.8 4002 4920.6 3725.9 5020.4 4386.4 5024.5 5037.9 4651.5 4098.9 TRUE FALSE 5222.321637 3741.469073 4586.603382 4012.869464 4820.426837 4634.754177 4689.324773 4993.854171 5135.040071 4606.702677 1.133635488 0.812179412 0.995636945 0.871093653 1.046394173 1.00608928 1.017935192 1.084040912 1.114688842 1 12.16951877 -6.826425535 1.256929382 1.064348765 0.949623107 0.182063866 0.086667158 0.648417444 2.146078705 0.042014846 0.03566775 1.49E-07 6.826425535 -0.114725658 S(ph)YEDLTESEDGAASGDSHK ddPTM_A459_MK2206_30min_R2 1 SYEDLTESEDGAASGDSHK 19 0 A0A0A0MSQ9;Q86VX9-5;Q86VX9 A0A0A0MSQ9 MON1A Vacuolar fusion protein MON1 homolog A 1 S(1)YEDLTESEDGAASGDSHK 184.57 6.15E-14 6404700 69855 82898 70324 85577 82253 76333 100650 75425 76005 95658 TRUE FALSE 75203.15251 78781.40586 72668.56706 78585.08535 79023.33393 79237.9058 87434.5341 85283.30647 82615.77751 92536.68729 0.812684728 0.851353211 0.785294667 0.849231669 0.853967613 0.856286389 0.944863455 0.921616161 0.892789443 1 16.49773783 -7.578453722 0.338689304 1.001304926 0.795260533 0.792439575 0.027678122 0.627917875 0.21169764 0.039813318 0.045049368 2.64E-08 7.578453722 -0.206044393 S(ph)YEDMIGEEVPSDQYYWAPLAQHER ddPTM_A459_MK2206_30min_R1 2 SYEDMIGEEVPSDQYYWAPLAQHER 25 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 S(1)YEDMIGEEVPSDQYYWAPLAQHER;S(1)YEDMIGEEVPSDQYYWAPLAQHER 210.79 2.40E-32 16566100 3154.7 2905.5 3078.7 1925.71 2392.88 1810.86 2065.83 2073.7 2036.5 1881.25 TRUE FALSE 2886.376199 2716.351422 2869.726422 2074.028518 2297.566523 1913.389328 1928.02225 2055.56986 2248.201463 2114.313453 1.365160022 1.284743952 1.35728523 0.980946565 1.086672612 0.904969566 0.911890452 0.972216233 1.063324579 1 11.04597356 -5.763730979 24.99985249 0.984825334 1.330631207 0.885681257 0.057135 18.54296322 202295.5135 0.016669772 0.026126041 1.72E-06 5.763730979 0.345805874 S(ph)YELPDGQVITIGNER ddPTM_A459_MK2206_30min_R1 4 SYELPDGQVITIGNER 16 0 P60709;A0A2R8Y793;Q6S8J3;A5A3E0;P63267-2;A0A2R8YEA7;Q9BYX7;P63261;P68133;P68032;P63267;P62736;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;POTEE;POTEF;ACTG2;POTEKP;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2" 1 S(1)YELPDGQVITIGNER;S(1)YELPDGQVITIGNER;S(1)YELPDGQVITIGNER;S(1)YELPDGQVITIGNER 179.09 1.08E-06 81335000 5066.1 5822.63 5810.28 3567.43 5104.22 5357.76 6655.45 4692.81 5652.44 5445.68 TRUE FALSE 4635.201592 5443.575729 5415.894382 3842.194077 4900.908109 5661.111741 6211.477074 4651.781257 6240.031365 6120.331951 0.757344802 0.889424916 0.884902065 0.627775439 0.800758545 0.924968088 1.014892186 0.760053751 1.019557667 1 12.57939419 -6.76330827 6.073142219 0.934009386 0.792947061 0.376565549 0.097373751 0.191371378 26.78078079 0.034017797 0.031814551 1.72E-07 6.76330827 -0.141062325 S(ph)YELPDGQVITIGNER ddPTM_A459_MK2206_30min_R2 2 SYELPDGQVITIGNER 16 0 P60709;A0A2R8Y793;Q6S8J3;A5A3E0;P63267-2;A0A2R8YEA7;Q9BYX7;P63261;P68133;P68032;P63267;P62736;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;POTEE;POTEF;ACTG2;POTEKP;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2" 1 S(1)YELPDGQVITIGNER;S(1)YELPDGQVITIGNER 205.18 1.55E-07 27265000 34259 26461 37620 35063 34232 30996 36701 34528 29519 38231 TRUE FALSE 36881.89538 25146.98522 38874.23202 32198.24074 32887.87968 32175.5745 31882.11461 39040.92815 32086.50926 36983.5256 0.997252014 0.679951 1.051122936 0.870610365 0.889257558 0.869997492 0.86206261 1.055630244 0.867589251 1 15.17459514 -7.730493874 24.99783327 0.971207512 0.885450032 0.13099033 0.100940819 376.6098533 304226.2395 0.044466642 0.025669299 1.86E-08 7.730493874 -0.08575748 S(ph)YESSEDCSEAAGSPAR ddPTM_A459_MK2206_30min_R2 1 SYESSEDCSEAAGSPAR 17 0 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 S(0.931)YES(0.034)S(0.034)EDCSEAAGSPAR 284.24 4.19E-64 15569000 33811 32823 30145 37961 33733 35449 42836 29709 26241 40275 TRUE FALSE 36399.59616 31193.05755 31150.01925 34859.46487 32408.47293 36798.03654 37211.58174 33592.06831 28523.39475 38960.83005 0.934261311 0.800626103 0.799521448 0.894731063 0.831821932 0.944488002 0.955102386 0.862201043 0.732104391 1 15.24973679 -6.727329922 24.99003033 0.893687042 0.84876467 0.081270014 0.076946227 551.9855551 404406.6191 0.025849084 0.025847718 1.87E-07 6.727329922 -0.044922372 S(ph)YLLVYYPHIVVPPLPEK ddPTM_A459_MK2206_30min_R2 1 SYLLVYYPHIVVPPLPEK 18 0 O95219;F8W9T3 O95219 SNX4 Sorting nexin-4 1 S(0.347)Y(0.295)LLVY(0.295)Y(0.063)PHIVVPPLPEK 54.281 0.047497 15655000 19154 93881 45478 130880 107460 140330 78036 64339 96834 43831 TRUE FALSE 20620.44497 89219.00606 46994.21382 120186.6853 103240.5805 145670.3565 67789.77946 72748.32821 105256.4463 42400.79806 0.486322096 2.104182236 1.108333238 2.834538283 2.434873521 3.435556951 1.598785461 1.715730164 2.482416631 1 15.3718038 -5.748390969 24.99942029 2.278777076 1.320069268 0.26452812 0.740427425 321.297643 615568.1004 0.19865375 0.341412624 1.78E-06 5.748390969 -0.958707809 S(ph)YNTPLLNPVQEHEAEGAAAGGTSIR ddPTM_A459_MK2206_30min_R1 1 SYNTPLLNPVQEHEAEGAAAGGTSIR 26 0 P85299;P85299-5;P85299-2;P85299-4;P85299-3 P85299 PRR5 Proline-rich protein 5 1 S(0.994)Y(0.001)NT(0.005)PLLNPVQEHEAEGAAAGGTSIR 125.79 4.87E-09 7451700 596.43 692.48 693.8 553.06 764.3 558.65 594.35 726.13 658.78 968.02 TRUE FALSE 545.7004965 647.3994261 646.706789 595.656777 733.8563126 590.2802802 554.701996 719.781522 727.2625385 1087.945626 0.501588024 0.595065976 0.59442933 0.547506018 0.674533998 0.542564138 0.509861874 0.661596963 0.668473241 1 10.08739074 -8.90688938 1.106024288 0.999903327 0.572624063 0.859611115 0.051540467 0.457967044 0.9022618 0.049391455 0.015384165 1.24E-09 8.90688938 -0.427279264 S(ph)YNTPLLNPVQEHEAEGAAAGGTSIR ddPTM_A459_MK2206_30min_R2 2 SYNTPLLNPVQEHEAEGAAAGGTSIR 26 0 P85299;P85299-5;P85299-2;P85299-4;P85299-3 P85299 PRR5 Proline-rich protein 5 1 S(0.979)Y(0.012)NT(0.009)PLLNPVQEHEAEGAAAGGTSIR;S(0.879)Y(0.054)NT(0.068)PLLNPVQEHEAEGAAAGGTSIR 131.4 3.79E-09 15239800 14300.5 23003.8 22477.8 23295.8 23470.7 23216.5 25924.8 19391.5 21169.5 21048.8 TRUE FALSE 15395.35728 21861.46474 23227.19863 21392.45862 22549.12239 24100.02018 22520.84262 21926.03563 23010.78484 20361.97938 0.756083531 1.073641434 1.140714181 1.050608009 1.107413084 1.183579441 1.106024233 1.076812584 1.130085853 1 14.31359019 -4.762871771 4.537529446 1.104214807 0.727794385 0.821126691 0.047760632 0.075014106 3.453419167 0.01147696 0.092268926 1.73E-05 4.762871771 -0.376420422 S(ph)YPGHVQPATAR ddPTM_A459_MK2206_30min_R2 3 SYPGHVQPATAR 12 0 H0YDK4;Q86VS8 H0YDK4 HOOK3 Protein Hook homolog 3 1 S(0.962)Y(0.038)PGHVQPATAR;S(0.999)Y(0.001)PGHVQPATAR;S(0.998)Y(0.002)PGHVQPATAR 78.69 0.03218 7597500 38920 46808 46001 54114 45636 44179 55249 38148 45148 40751 TRUE FALSE 41899.74512 44483.58279 47534.65038 49692.7131 43844.10134 45860.2628 47994.73993 43134.07458 49074.89143 39421.29821 1.062870758 1.128414964 1.20581139 1.260554963 1.112193239 1.163337203 1.217482481 1.094181992 1.244882682 1 15.26668767 -10.42371645 7.939405419 1.000003889 1.166210741 0.384245492 0.062856241 3.45E-10 1.13E-10 0.060293965 0.014623434 3.77E-11 10.42371645 0.166206852 S(ph)YSAGEASEVSR ddPTM_A459_MK2206_30min_R2 1 SYSAGEASEVSR 12 0 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 S(0.621)YS(0.379)AGEASEVSR 153.81 0.00045908 16882000 24306 17236 18799 18085 11714 22662 20941 20498 18637 20212 TRUE FALSE 26166.88605 16380.0853 19425.74928 16607.39765 11254.0495 23524.41829 18191.42155 23177.15898 20258.01257 19552.4841 1.338289596 0.837749578 0.993518224 0.849375331 0.57558157 1.203142178 0.930389277 1.18538181 1.036083828 1 14.25506429 S(ph)YSAGNASQLEQLSR ddPTM_A459_MK2206_30min_R1 1 SYSAGNASQLEQLSR 15 0 Q14678;Q14678-2 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 1 S(0.835)YS(0.16)AGNAS(0.005)QLEQLSR 180.1 2.01E-05 30485000 566.95 550.96 409.02 490.24 680.88 898.04 1023 1068.8 1237.9 1230.1 TRUE FALSE 518.7279253 515.0924039 381.256862 527.9983697 653.7591078 948.8862487 954.7575366 1059.455594 1366.584135 1382.494075 0.375211681 0.372581997 0.275774681 0.381917275 0.472883841 0.686358275 0.690605156 0.766336445 0.988491857 1 10.43305758 -7.263773876 0.65299169 1.004869092 0.314734758 0.949048045 0.05644669 0.160855042 0.137880841 0.052427218 0.036235889 5.45E-08 7.263773876 -0.690134333 down S(ph)YSAGNASQLEQLSR ddPTM_A459_MK2206_30min_R2 1 SYSAGNASQLEQLSR 15 0 Q14678;Q14678-2 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 1 S(0.677)YS(0.323)AGNASQLEQLSR 181.72 2.05E-05 33330000 10444 15088 12646 9300.6 13121 16757 22153 18724 22858 23229 TRUE FALSE 11243.60067 14338.75186 13067.61133 8540.711229 12605.80361 17394.69938 19244.28449 21171.29109 24846.14752 22471.03963 0.500359612 0.638099175 0.581531231 0.380076372 0.560979991 0.774094108 0.856403834 0.942158949 1.105696395 1 14.45577925 -7.202866881 1.290754374 1.027593074 0.527856214 0.886266896 0.07623968 0.152663299 0.500534508 0.050408994 0.030617286 6.27E-08 7.202866881 -0.49973686 S(ph)YSCSSPK ddPTM_A459_MK2206_30min_R2 3 SYSCSSPK 8 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(0.527)YS(0.228)CS(0.228)S(0.017)PK;S(0.625)YS(0.372)CS(0.003)SPK;S(0.697)YS(0.149)CS(0.149)S(0.004)PK 118.03 0.0085674 28177800 54437 77644 65802 58649 67823 77791 89057 76888 91592 95348 TRUE FALSE 58604.73857 73788.31186 67995.80584 53857.18909 65159.92824 80751.39102 77363.70892 86937.5256 99558.5066 92236.80257 0.635372616 0.799987747 0.737187369 0.583901302 0.70644175 0.87547908 0.838750984 0.942547044 1.079379422 1 16.49305488 -7.414000126 1.025145994 1.034093607 0.695249456 0.789947653 0.069220488 0.25735054 0.509505112 0.056450542 0.028468013 3.85E-08 7.414000126 -0.338844151 S(ph)YSFDVDNGTSAGR ddPTM_A459_MK2206_30min_R2 2 SYSFDVDNGTSAGR 14 0 Q08499-9 Q08499-9 PDE4D "cAMP-specific 3,5-cyclic phosphodiesterase 4D" 1 S(0.973)YS(0.027)FDVDNGTSAGR;S(0.613)YS(0.387)FDVDNGTSAGR 157.37 0.00031379 15420100 45673 51340 44544 54603 47343 60898 54886 53782 59242 34906 TRUE FALSE 49169.76 48790.53026 46029.07473 50141.76023 45484.07594 63215.51606 47679.40227 60811.49206 64394.76207 33767.02008 1.456147445 1.444916671 1.363137008 1.484932935 1.346997035 1.872108226 1.412010955 1.800913789 1.907031237 1 15.04332725 -6.727868261 24.99964511 1.636820281 1.421187725 0.104258606 0.250220594 351.738551 261930.7354 0.077657612 0.077653507 1.87E-07 6.727868261 -0.215632556 S(ph)YSLSELSVLQAK ddPTM_A459_MK2206_30min_R1 1 SYSLSELSVLQAK 13 0 Q9P0V3-2;Q9P0V3 Q9P0V3-2 SH3BP4 SH3 domain-binding protein 4 1 S(0.84)YS(0.134)LS(0.025)ELSVLQAK 228.38 5.68E-13 40002000 3802.3 4068 3787.1 3280.4 4385.5 4385.5 4950.3 4369.7 4166.2 3891.2 TRUE FALSE 3478.894418 3803.172461 3530.042203 3533.056976 4210.816249 4633.80322 4620.074519 4331.496174 4599.291399 4373.271233 0.795490202 0.869640198 0.807185746 0.80787511 0.962852753 1.059573709 1.05643448 0.99044764 1.051682174 1 12.09449711 -6.412654138 3.358793012 1.031708437 0.822567811 0.92232518 0.028953511 0.06418723 1.352026477 0.009512288 0.010780284 3.87E-07 6.412654138 -0.209140626 S(ph)YSLSELSVLQAK ddPTM_A459_MK2206_30min_R2 1 SYSLSELSVLQAK 13 0 Q9P0V3-2;Q9P0V3 Q9P0V3-2 SH3BP4 SH3 domain-binding protein 4 1 S(0.731)YS(0.055)LS(0.214)ELSVLQAK 234.04 1.56E-13 28811000 85045 101140 92522 93587 90035 99763 114820 76362 98850 85772 TRUE FALSE 91556.11059 96117.53467 95606.6373 85940.64273 86499.77351 103559.5509 99743.99608 86342.77559 107447.7943 82973.26666 1.103441075 1.158415699 1.152258325 1.035763038 1.042501724 1.248107433 1.202122082 1.040609573 1.294968833 1 16.34035897 -6.745129369 24.99791454 1.16250975 1.101309838 0.093888305 0.090181347 602.6358517 923641.1229 0.029119812 0.029040794 1.80E-07 6.745129369 -0.061199912 S(ph)YSPAHNR ddPTM_A459_MK2206_30min_R2 1 SYSPAHNR 8 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.751)YS(0.249)PAHNR 101.46 0.017015 14246000 9412.9 14836 10257 11039 12688 10974 9580.2 9712.8 11848 8677.4 TRUE FALSE 10133.55886 14099.26581 10598.96326 10137.07839 12189.80537 11391.62326 8322.308232 10982.29631 12878.51762 8394.257149 1.207201386 1.679632344 1.262644576 1.207620664 1.452160108 1.35707342 0.991428793 1.308310684 1.534205755 1 13.03518694 -13.83002756 0.197377639 3.73E-24 1.38463002 0.206157902 0.184587224 172.2743843 2.170825948 69.85274192 0.472851015 1.48E-14 13.83002756 1.38463002 S(ph)YSPDGK ddPTM_A459_MK2206_30min_R1 1 SYSPDGK 7 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.866)YS(0.134)PDGK 112.11 0.014704 32200000 12656 12990 9470 8201 4847.7 4922.7 11104 10112 0 7765.2 TRUE FALSE 11579.54074 12144.34864 8827.202785 8832.642441 4654.605844 5201.41902 10363.27242 10023.59185 0 8727.2116 1.32683167 1.391549695 1.011457403 1.012080702 0.533343989 0.596000104 1.187466615 1.148544611 0 1 13.09130506 -5.559498169 1.69338634 0.7734377 1.375474923 0.331038139 0.330796065 0.480886917 2.68243678 0.102016555 0.282884811 2.76E-06 5.559498169 0.602037223 S(ph)YSPDGK ddPTM_A459_MK2206_30min_R2 4 SYSPDGK 7 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.57)YS(0.43)PDGK;S(0.863)YS(0.137)PDGK;S(0.927)YS(0.073)PDGK;S(0.932)YS(0.068)PDGK 126.24 0.0057671 1368089000 1259980 1125770 1252790 1107610 1083800 796967 1298520 1209290 1049290 1339120 TRUE FALSE 1356445.038 1069865.899 1294557.393 1017114.72 1041244.566 827296.1376 1128022.764 1367348.355 1140555.348 1295424.624 1.047104565 0.825880471 0.999330543 0.785159322 0.803786301 0.638629313 0.870774527 1.055521355 0.880449025 1 20.30499364 -9.906283842 8.653374148 0.999998058 0.87349965 0.080439972 0.122170098 0 0 0.124102309 0.030099231 1.24E-10 9.906283842 -0.126498408 S(ph)YSSPDITQAIQEEEKR ddPTM_A459_MK2206_30min_R2 1 SYSSPDITQAIQEEEKR 17 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.388)Y(0.001)S(0.306)S(0.306)PDITQAIQEEEKR 87.228 0.0055155 19022000 36209 49604 49006 52901 65019 36798 46965 36979 46952 50822 TRUE FALSE 38981.18888 47140.73749 50639.83558 48578.81908 62466.02737 38198.37368 40798.43908 41812.28227 51035.80009 49163.6823 0.792885867 0.958852862 1.030025279 0.988103755 1.270572594 0.776963236 0.829849132 0.850470923 1.038079283 1 15.58530536 S(ph)YTLVVAK ddPTM_A459_MK2206_30min_R1 2 SYTLVVAK 8 0 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 S(0.901)YT(0.099)LVVAK;S(0.637)YT(0.363)LVVAK 169.41 0.0001982 70036000 12101.9 6659 9353.7 8746.2 8632.9 6601.6 8393.8 7274.5 7897.6 6432.6 TRUE FALSE 11072.56986 6225.49789 8718.796905 9419.833839 8289.033313 6975.376887 7833.864917 7210.899813 8718.583782 7229.519052 1.531577658 0.861121998 1.205999575 1.302968257 1.146553907 0.964846601 1.083594201 0.997424554 1.205970096 1 12.81968396 -6.535457164 18.57163351 1.052661469 1.201352835 0.194737553 0.165272172 20.33765847 30022.90225 0.052391876 0.052517894 2.91E-07 6.535457164 0.148691366 S(ph)YTLVVAK ddPTM_A459_MK2206_30min_R2 4 SYTLVVAK 8 0 E9PK52;E9PHY5;O43491-4;E9PII3;O43491-2;O43491-3;A0A2R8Y5B3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2;O43491 E9PK52;O43491 EPB41L2 Band 4.1-like protein 2 1 S(1)YTLVVAK;S(1)YTLVVAK;S(0.99)YT(0.01)LVVAK;S(1)YTLVVAK 159.79 0.00045957 108963000 441942 530724 449685 449060 341770 416997 421997 404047 336729 329163 TRUE FALSE 475777.4193 504369.0179 464677.2735 412370.3615 328350.3925 432866.113 366588.287 456857.3302 366017.0798 318422.4383 1.494170517 1.583961924 1.459310707 1.295041781 1.031178564 1.359408324 1.151263991 1.434752314 1.149470124 1 18.28058248 -1.522878745 0.229725152 1.111324832 3.805294491 0.521455009 0.13347807 44.04589584 0.57616632 0.202423936 44.59911755 0.03 1.522878745 2.693969658 S(ph)YVTTSTR ddPTM_A459_MK2206_30min_R1 3 SYVTTSTR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.646)YVT(0.003)T(0.008)S(0.343)TR;S(0.999)YVTTSTR;S(1)YVTTSTR 135.43 0.0026584 246753000 9506.5 9465.1 8862.5 8414.8 9201.5 8509.7 9188.3 7645 6802.36 6502.45 TRUE FALSE 8697.922254 8848.92027 8260.938192 9062.909354 8834.984771 8991.51186 8575.365272 7578.160571 7509.489664 7308.022597 1.190188199 1.210850152 1.130393083 1.240131545 1.208943275 1.230361803 1.173418002 1.036964578 1.027567932 1 12.83526538 -7.747488965 3.495910639 1.018154113 1.201308711 0.89098177 0.028462769 0.071340284 1.824906689 0.016427261 0.007987734 1.79E-08 7.747488965 0.183154598 S(ph)YVTTSTR ddPTM_A459_MK2206_30min_R2 1 SYVTTSTR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.962)YVT(0.009)T(0.028)S(0.001)TR 120.45 0.0073788 93331000 37140 36089 37727 56467 43927 41563 41317 29707 44254 35960 TRUE FALSE 39983.46696 34296.87274 38984.79935 51853.46547 42202.20526 43144.70909 35892.02827 33589.8069 48103.13293 34786.62814 1.149391852 0.985921159 1.120683476 1.490614878 1.213173208 1.240267062 1.031776582 0.965595365 1.382805276 1 15.08624523 -7.254670339 24.71910877 1.092177253 1.200479438 0.094321745 0.159238145 1232.685551 4501515.716 0.064922159 0.049135298 5.56E-08 7.254670339 0.108302185 SAAAGALGS(ph)PGLPLR ddPTM_A459_MK2206_30min_R2 1 SAAAGALGSPGLPLR 15 0 O75145-2;O75145;A0A0C4DGR8;A0A0C4DGR7 O75145-2 PPFIA3 Liprin-alpha-3 1 SAAAGALGS(1)PGLPLR 97.223 0.0096661 2929900 16076 18113 15374 19382 16348 15529 18732 15794 16447 15620 TRUE FALSE 17306.79092 17213.53476 15886.56149 17798.4286 15706.09538 16119.96698 16272.4659 17858.33003 17877.53033 15110.32068 1.145362252 1.139190565 1.051371564 1.1778988 1.039428329 1.066818324 1.076910692 1.181863073 1.183133747 1 13.88324666 -11.36653998 13.35996929 0.999060145 1.115276864 0.307321696 0.053003644 0.001551514 1.82E-05 0.053662688 0.012920627 4.30E-12 11.36653998 0.11621672 SAAAT(ph)SPAPHLVAGPLLGTVGK ddPTM_A459_MK2206_30min_R2 2 SAAATSPAPHLVAGPLLGTVGK 22 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 S(0.096)AAAT(0.452)S(0.452)PAPHLVAGPLLGTVGK;S(0.123)AAAT(0.439)S(0.439)PAPHLVAGPLLGTVGK 91.276 0.00050068 17785900 139284 158026 129489 138736 121135 118178 134380 102039 97824 120465 TRUE FALSE 149947.6901 150178.6586 133806.0986 127400.825 116378.6312 122675.3466 116735.7446 115375.8477 106332.5547 116534.2369 1.286726494 1.288708474 1.148212767 1.093248031 0.998664721 1.052697901 1.001729171 0.990059666 0.912457639 1 16.83039434 -5.484526819 0.763606965 0.978238289 1.370056068 0.925379518 0.033130479 0.303363409 0.25457837 0.015188794 0.086665824 3.28E-06 5.484526819 0.391817779 SAAEMYGSVTEHPS(ph)PSPLLSSSFDLDYDFQR ddPTM_A459_MK2206_30min_R1 4 SAAEMYGSVTEHPSPSPLLSSSFDLDYDFQR 31 0 G3V2Q1;P07910;G3V576;G3V555;G3V575 G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 SAAEMYGSVTEHPS(0.954)PS(0.046)PLLSSSFDLDYDFQR;SAAEMYGSVTEHPS(0.862)PS(0.138)PLLSSSFDLDYDFQR;SAAEMYGSVT(0.002)EHPS(0.74)PS(0.257)PLLS(0.001)SSFDLDYDFQR;S(0.003)AAEMY(0.016)GS(0.017)VT(0.016)EHPS(0.814)PS(0.132)PLLS(0.001)S(0.001)S(0.001)FDLDYDFQR 150.17 3.52E-20 28322900 4222.96 2839.72 3006.31 2075.684 4499.27 3687.46 3579.118 3346.9 2063.713 1900.29 TRUE FALSE 3863.775076 2654.853712 2802.250053 2235.553541 4320.054549 3896.240799 3340.361569 3317.638406 2278.243351 2135.712272 1.80912716 1.243076489 1.312091563 1.046748465 2.022769924 1.824328516 1.56405037 1.553410752 1.066737023 1 11.06050158 -8.288959483 5.081379647 1.015537582 1.538882473 0.353589738 0.277858042 0.23880526 17.1188374 0.267633702 0.07542122 5.14E-09 8.288959483 0.52334489 SAAEMYGSVTEHPSPS(ph)PLLSSSFDLDYDFQR ddPTM_A459_MK2206_30min_R1 1 SAAEMYGSVTEHPSPSPLLSSSFDLDYDFQR 31 0 G3V2Q1;P07910;G3V576;G3V555;G3V575 G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 SAAEMYGSVTEHPS(0.013)PS(0.981)PLLS(0.004)S(0.001)SFDLDYDFQR 135.63 2.27E-18 5866000 972.02 478.44 584.03 548.49 894.89 895.09 885.13 677.73 465.34 401.38 TRUE FALSE 889.3445947 447.293469 544.3876708 590.7347948 859.2446363 945.7692223 826.0845927 671.8046781 513.7137582 451.1059847 1.971475939 0.991548515 1.206784413 1.30952551 1.904751135 2.096556584 1.831242814 1.489239117 1.138787282 1 8.817322616 -8.280340755 3.070726795 1.01915673 1.597222073 0.290058179 0.338369524 0.37772627 6.76917721 0.347321141 0.09857962 5.24E-09 8.280340755 0.578065343 SAAPS(ph)SPGSPR ddPTM_A459_MK2206_30min_R1 2 SAAPSSPGSPR 11 0 Q9H211;H3BSY1 Q9H211 CDT1 DNA replication factor Cdt1 1 SAAPS(0.5)S(0.5)PGSPR;SAAPS(0.5)S(0.5)PGSPR 160.67 0.00060235 3654600 4116.9 4073.4 3574.2 3180.3 3379.3 3591.5 4365.9 3274.7 3497.9 4135.6 TRUE FALSE 3766.736036 3808.22092 3331.593262 3425.247257 3244.695325 3794.847626 4074.658777 3246.069643 3861.519222 4647.94935 0.81040815 0.819333567 0.716787773 0.736937303 0.698091799 0.816456321 0.876657311 0.698387482 0.830800624 1 12.18237863 -6.950680643 13.62335769 0.829215861 0.756594721 0.232685097 0.07795008 2.635002227 725.2839745 0.027281165 0.024058569 1.12E-07 6.950680643 -0.07262114 SAAPS(ph)SPGSPR ddPTM_A459_MK2206_30min_R2 2 SAAPSSPGSPR 11 0 Q9H211;H3BSY1 Q9H211 CDT1 DNA replication factor Cdt1 1 SAAPS(0.5)S(0.5)PGSPR;SAAPS(0.493)S(0.493)PGS(0.014)PR 142.89 0.00088397 7423700 37061 33292 31162 39534 28996 32411 44876 33153 29056 38670 TRUE FALSE 39898.41866 31638.76769 32200.92553 36303.94574 27857.47135 33644.42332 38983.72729 37486.21093 31583.23836 37408.20107 1.066568761 0.845770895 0.860798558 0.970480929 0.74468888 0.899386294 1.042117134 1.002085368 0.844286479 1 15.19106697 -7.037295811 22.99911235 0.972075496 0.889302517 0.131993257 0.091951113 426.7283018 263147.3715 0.03474116 0.026923071 9.18E-08 7.037295811 -0.082772978 SAAPSSPGS(ph)PRPALPATPPATPPAASPSALK ddPTM_A459_MK2206_30min_R2 1 SAAPSSPGSPRPALPATPPATPPAASPSALK 31 1 Q9H211;H3BSY1 Q9H211 CDT1 DNA replication factor Cdt1 1 SAAPS(0.028)S(0.091)PGS(0.673)PRPALPAT(0.207)PPATPPAASPSALK 85.191 7.56E-07 6341400 24476 28451 28917 29555 36083 33151 40124 29317 33129 34011 TRUE FALSE 26349.90138 27038.16471 29881.07835 27140.26196 34666.20012 34412.58454 34855.6706 33148.83256 36010.50054 32901.22386 0.800879064 0.821798144 0.908205679 0.824901289 1.053644699 1.045936306 1.059403466 1.00752582 1.094503375 1 15.00585363 -6.262973365 24.99751554 1.044795336 0.842668305 0.885692434 0.035989248 42.44660016 691700.5082 0.010781794 0.012886391 5.46E-07 6.262973365 -0.202127031 SAAQAAAQT(ph)NSNAAGK ddPTM_A459_MK2206_30min_R2 3 SAAQAAAQTNSNAAGK 16 0 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 SAAQAAAQT(0.98)NS(0.02)NAAGK;SAAQAAAQT(0.804)NS(0.196)NAAGK;SAAQAAAQT(0.804)NS(0.196)NAAGK 208.62 5.89E-29 2293700 20908.2 23114.4 20990.4 24840 23662.1 20742.8 29321.2 23180.2 16792.7 23634.9 TRUE FALSE 22508.94787 21966.57251 21690.20946 22810.49254 22733.00706 21532.18179 25471.29122 26209.93173 18253.29869 22863.69515 0.984484254 0.960762132 0.948674714 0.997673053 0.994284035 0.941762985 1.114049634 1.146355896 0.79835296 1 14.48077097 SAAQAAAQTNS(ph)NAAGK ddPTM_A459_MK2206_30min_R1 1 SAAQAAAQTNSNAAGK 16 0 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 SAAQAAAQT(0.002)NS(0.998)NAAGK 199.41 8.31E-07 2149800 778.56 538.6 735.13 488.42 631.08 534.68 725.43 631.49 410.79 508.75 TRUE FALSE 712.3393836 503.5370421 685.2314238 526.038193 605.9427473 564.9531195 677.0378883 625.9689495 453.4930905 571.7777909 1.245832551 0.880651628 1.198422595 0.920004592 1.059752157 0.98806412 1.184092665 1.094776606 0.793128201 1 9.159310773 -4.733716012 24.5125343 1.025055966 1.245834057 0.241385627 0.122101827 3635.051249 3213832.65 0.028874754 2.648489829 1.85E-05 4.733716012 0.220778091 SAAQAAAQTNS(ph)NAAGK ddPTM_A459_MK2206_30min_R2 3 SAAQAAAQTNSNAAGK 16 0 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 SAAQAAAQT(0.008)NS(0.992)NAAGK;SAAQAAAQT(0.03)NS(0.97)NAAGK;SAAQAAAQTNS(1)NAAGK 241.98 1.87E-65 1612600 22392.1 19944.8 22165.1 24369.8 21576.4 19326.8 29818.1 19692.8 17784.5 22159.7 TRUE FALSE 24106.45639 18954.37023 22904.07337 22378.70938 20729.20212 20062.29492 25902.94765 22266.71658 19331.36366 21436.6308 1.124545019 0.884204725 1.068454907 1.043947138 0.966999073 0.935888438 1.208349758 1.038722772 0.901791137 1 14.38779055 SAAS(ph)PVVSSMPER ddPTM_A459_MK2206_30min_R1 2 SAASPVVSSMPER 13 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 S(0.352)AAS(0.648)PVVSSMPER;S(0.146)AAS(0.854)PVVSSMPER 209.11 8.84E-06 63973000 4846.9 5059.1 4923.7 3859.8 5238.9 4297.5 4975.6 4209.7 4169.4 3994.2 TRUE FALSE 4434.645703 4729.75167 4589.492962 4157.082465 5030.223519 4540.820736 4643.686802 4172.895037 4602.82405 4489.031651 0.987884704 1.053624042 1.022379283 0.926053276 1.120558711 1.011536806 1.034451785 0.929575766 1.025348986 1 12.13218855 SAAS(ph)PVVSSMPER ddPTM_A459_MK2206_30min_R2 1 SAASPVVSSMPER 13 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 S(0.026)AAS(0.914)PVVS(0.056)S(0.004)MPER 116.9 0.0037204 5232600 14240 16149 15042 23877 23824 16045 19774 17193 14216 18096 TRUE FALSE 15330.22535 15347.06414 15543.49277 21926.17272 22888.55005 16655.60372 17177.65005 19440.18413 15452.48198 17505.529 0.875736194 0.876698107 0.887919055 1.252528428 1.307504049 0.951448181 0.981269977 1.110516805 0.882720081 1 14.09552304 -5.627757343 12.11728686 1.075324722 0.877762057 0.328499225 0.12390171 0.538613825 58.21839347 0.035972906 0.062316573 2.36E-06 5.627757343 -0.197562665 SAAS(ph)REDLVGPEVGASPQSGR ddPTM_A459_MK2206_30min_R1 2 SAASREDLVGPEVGASPQSGR 21 1 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 S(0.001)AAS(0.999)REDLVGPEVGASPQSGR;S(0.008)AAS(0.992)REDLVGPEVGASPQSGR 232.6 1.81E-24 14986100 2036.05 2279.19 1929.98 1693.52 2334.47 1991.9 2298.7 1798.77 2139.09 1672.87 TRUE FALSE 1862.873256 2130.814317 1798.978335 1823.955204 2241.483117 2104.679657 2145.357917 1783.043544 2361.45606 1880.117765 0.990827963 1.133340877 0.956843432 0.970128168 1.192203573 1.119440333 1.14107635 0.94836801 1.256014971 1 10.87660732 -6.246976884 24.8818418 1.109009724 1.017400404 0.203777261 0.093492145 1324.772638 2279189.759 0.026765542 0.034398355 5.66E-07 6.246976884 -0.09160932 SAAS(ph)REDLVGPEVGASPQSGR ddPTM_A459_MK2206_30min_R2 2 SAASREDLVGPEVGASPQSGR 21 1 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 S(0.001)AAS(0.999)REDLVGPEVGASPQSGR;SAAS(1)REDLVGPEVGASPQSGR 256.66 1.07E-47 10715500 17780.4 20962.5 15412.5 20452.1 16778.1 20643.8 19150.1 18035.8 16736.6 14975.7 TRUE FALSE 19141.68109 19921.53273 15926.34506 18781.09801 16119.30749 21429.41427 16635.66887 20393.14099 18192.31922 14487.04414 1.321296526 1.375127496 1.099350903 1.296406488 1.112670559 1.479212328 1.148313535 1.407681291 1.25576474 1 13.82247564 -8.573187601 21.09804904 0.999999998 1.277959513 0.324613476 0.120424247 6067.710324 2544614.648 0.109516107 0.028276937 2.67E-09 8.573187601 0.277959514 SAASSSVSFS(ph)PGGGGGGAAAAAAAACR ddPTM_A459_MK2206_30min_R2 1 SAASSSVSFSPGGGGGGAAAAAAAACR 27 0 B4E1M0;E9PPE2;A0A6I8PS01;Q6P1R3-3;Q6P1R3 B4E1M0 MSANTD2 Myb/SANT-like DNA-binding domain-containing protein 2 1 SAAS(0.002)S(0.053)S(0.053)VS(0.192)FS(0.7)PGGGGGGAAAAAAAACR 214.86 2.90E-52 0 7077.9 8920.5 6832.8 7158 7486.8 7607.8 8363.6 6052.7 6078 7079.5 TRUE FALSE 7619.789466 8477.520942 7060.602142 6573.168503 7192.830614 7897.32016 7265.449274 6843.808672 6606.653453 6848.496495 1.112622233 1.237865997 1.030971126 0.959797308 1.05027879 1.153146558 1.060882382 0.999315496 0.964686696 1 12.74157158 -1.522878756 0.319669425 1.00851139 2.60371222 0.307339218 0.069798416 75.38993372 1.07600881 0.071882281 70.282296 0.029999999 1.522878756 1.595200831 SAAVETASLS(ph)PSLVPAR ddPTM_A459_MK2206_30min_R1 3 SAAVETASLSPSLVPAR 17 0 Q2KHT3;Q2KHT3-3 Q2KHT3 CLEC16A Protein CLEC16A 1 SAAVETAS(0.001)LS(0.771)PS(0.228)LVPAR;SAAVETAS(0.002)LS(0.996)PS(0.002)LVPAR;SAAVET(0.001)AS(0.005)LS(0.944)PS(0.05)LVPAR 251.02 1.35E-30 21140600 5551.25 5272.1 5261.8 4333.86 5480.4 4906.2 5308.7 4551.95 4793.1 3801.36 TRUE FALSE 5079.087037 4928.885332 4904.643676 4667.654648 5262.104063 5183.984804 4954.566309 4512.152781 5291.359897 4272.301176 1.188841055 1.153683958 1.148009814 1.092538765 1.231679099 1.213394045 1.159694999 1.056141081 1.238526892 1 12.06079764 -10.871151 3.959016248 0.99957849 1.161843261 0.444848595 0.055120237 0.000207171 3.41E-05 0.053412378 0.012920633 1.35E-11 10.871151 0.162264772 SAAVETASLS(ph)PSLVPAR ddPTM_A459_MK2206_30min_R2 3 SAAVETASLSPSLVPAR 17 0 Q2KHT3;Q2KHT3-3 Q2KHT3 CLEC16A Protein CLEC16A 1 SAAVETAS(0.002)LS(0.975)PS(0.022)LVPAR;SAAVETAS(0.133)LS(0.679)PS(0.188)LVPAR;SAAVET(0.001)AS(0.023)LS(0.954)PS(0.023)LVPAR 235.78 9.20E-21 16849200 41096.9 46996.3 47173.3 53890.7 48261.5 47697.6 43213.3 41901.8 44525.1 40168.5 TRUE FALSE 44243.31026 44662.53208 48746.03428 49487.65742 46366.51102 49512.76559 37539.3418 47378.50913 48397.81272 38857.80513 1.138595196 1.149383809 1.254472148 1.273557713 1.193235461 1.274203868 0.966069537 1.219279086 1.245510717 1 15.24591679 SAAVETASLSPS(ph)LVPAR ddPTM_A459_MK2206_30min_R2 1 SAAVETASLSPSLVPAR 17 0 Q2KHT3;Q2KHT3-3 Q2KHT3 CLEC16A Protein CLEC16A 1 SAAVETAS(0.005)LS(0.34)PS(0.655)LVPAR 111.11 0.0020614 14349000 16954 22925 21654 25927 19849 25720 21577 20339 21322 19425 TRUE FALSE 18252.01128 21786.57784 22375.93355 23808.68116 19069.62853 26698.79262 18743.91398 22997.37713 23176.54902 18791.16384 0.971308187 1.159405454 1.190768903 1.267014718 1.014818916 1.420816339 0.997485528 1.223839956 1.233374857 1 14.1977668 -4.761852229 4.469275405 1.177365893 0.953707293 0.172937872 0.12767975 0.334689725 14.58805652 0.029346093 0.242271406 1.73E-05 4.761852229 -0.2236586 SADAGS(ph)FSPTPGQIGGAVK ddPTM_A459_MK2206_30min_R1 1 SADAGSFSPTPGQIGGAVK 19 0 O00443 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha 1 S(0.001)ADAGS(0.498)FS(0.498)PT(0.004)PGQIGGAVK 245.1 1.64E-30 5419300 1813.2 1574.1 1954.6 1492.7 1674.3 1857.1 1926 1645.1 1567.6 1307.4 TRUE FALSE 1658.977819 1471.625804 1821.927198 1607.668013 1607.609086 1962.247397 1797.520054 1630.717064 1730.55763 1469.370582 1.129039766 1.001534821 1.239937167 1.094120184 1.094080081 1.335433975 1.223326556 1.109806528 1.177754374 1 10.52098258 -5.258346683 24.98129652 1.167147997 1.065287299 0.135749851 0.093227786 470.2480209 3798377.951 0.023802979 0.057621337 5.52E-06 5.258346683 -0.101860697 SADAGSFS(ph)PTPGQIGGAVK ddPTM_A459_MK2206_30min_R1 1 SADAGSFSPTPGQIGGAVK 19 0 O00443 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha 1 SADAGS(0.221)FS(0.746)PT(0.034)PGQIGGAVK 199.61 2.19E-15 6925200 3078.3 3207.9 3398.4 2991.2 2845.2 2895.9 3000 3309.5 2839.9 2978.3 TRUE FALSE 2816.47442 2999.065127 3167.726076 3221.582742 2731.869659 3059.863355 2799.875474 3280.56539 3135.117768 3347.274289 0.841423253 0.895972325 0.946359875 0.962449583 0.816147535 0.914135829 0.836464309 0.980070681 0.936618125 1 11.70877106 -7.783540578 24.9845176 0.968758354 0.891304734 0.405012554 0.046815548 275.3829001 311304.7798 0.025958172 0.012485684 1.65E-08 7.783540578 -0.077453619 SADAGSFS(ph)PTPGQIGGAVK ddPTM_A459_MK2206_30min_R2 4 SADAGSFSPTPGQIGGAVK 19 0 O00443 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha 1 SADAGS(0.088)FS(0.84)PT(0.072)PGQIGGAVK;SADAGSFS(0.774)PT(0.226)PGQIGGAVK;SADAGS(0.084)FS(0.913)PT(0.004)PGQIGGAVK;SADAGS(0.185)FS(0.522)PT(0.293)PGQIGGAVK 133.78 0.0002198 23992700 117345 145137 130150 151812 152788 120055 154305 139082 128693 156024 TRUE FALSE 126329.0234 137929.7076 134489.136 139408.474 146788.7754 124623.7772 134044.5681 157260.4949 139886.4845 150932.9497 0.836987707 0.913847559 0.891052195 0.923645064 0.972542945 0.825689668 0.888106729 1.041922889 0.926812103 1 17.20354826 -7.742407471 24.98950245 0.988275624 0.895476636 0.467219356 0.047147107 208.3716416 273599.2501 0.02203826 0.012697134 1.81E-08 7.742407471 -0.092798988 SADCSVPS(ph)PALDK ddPTM_A459_MK2206_30min_R2 1 SADCSVPSPALDK 13 0 Q68DC6;O43439-2;O43439-5;O43439;O43439-4 Q68DC6 DKFZp313F2116;CBFA2T2 Protein CBFA2T2 1 SADCS(0.011)VPS(0.989)PALDK 131.08 0.0016828 0 32481 26414 28718 29399 23806 19390 28859 24190 22055 29576 TRUE FALSE 34967.77033 25102.31917 29675.44379 26997.00766 22871.25682 20127.90004 25069.77863 27351.71606 23973.30403 28610.93754 1.222181911 0.877367934 1.037206269 0.943590458 0.799388583 0.703503687 0.876230588 0.955988108 0.837906972 1 14.80427915 -1.522879171 0.877449018 0.869279372 139.890436 0.498840998 0.096264479 701.9383499 1.718283362 0.034007458 195148.5451 0.029999971 1.522879171 139.0211566 SADGS(ph)APAGEGEGVTLQR ddPTM_A459_MK2206_30min_R1 1 SADGSAPAGEGEGVTLQR 18 0 Q01650 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 1 SADGS(1)APAGEGEGVTLQR 289.59 1.04E-80 6026500 782.84 822.62 614.01 613.72 1066.1 1127.8 1027.6 1089.9 1153.7 844.73 TRUE FALSE 716.2553471 769.0672885 572.3327119 660.9888207 1023.634979 1191.655061 959.050679 1080.371119 1273.631244 949.3815298 0.754444156 0.810071888 0.602847953 0.696230967 1.078212444 1.255190905 1.010184682 1.137973602 1.341537837 1 9.890844172 -6.315551899 4.47040864 1.149361768 0.713247823 0.788362789 0.107258291 0.096094903 4.105466368 0.033807103 0.039348796 4.84E-07 6.315551899 -0.436113945 SADGS(ph)APAGEGEGVTLQR ddPTM_A459_MK2206_30min_R2 4 SADGSAPAGEGEGVTLQR 18 0 Q01650 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 1 SADGS(1)APAGEGEGVTLQR;S(0.015)ADGS(0.985)APAGEGEGVTLQR;SADGS(1)APAGEGEGVTLQR;SADGS(1)APAGEGEGVTLQR 239.7 5.38E-25 32117400 99012 59293 71067 76364 77296 106932 128220 69667 127445 87026 TRUE FALSE 106592.4348 56348.59584 73436.33831 70124.81692 74260.97066 111001.3722 111384.56 78772.7161 138529.9357 84186.34875 1.266148686 0.669331747 0.872306964 0.832971354 0.882102286 1.318519853 1.323071515 0.93569465 1.645515428 1 16.36129869 -6.754622747 24.90971785 1.245448165 0.885732885 0.354860765 0.228502431 159.2800978 582049.5484 0.071894425 0.070358525 1.76E-07 6.754622747 -0.359715281 SADTLWDIQK ddPTM_A459_MK2206_30min_R2 1 SADTLWDIQK 10 0 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 0 160.36 0.006141 9364800 68177 70435 68234 84911 68380 67293 66492 55815 68410 67872 FALSE TRUE 73396.68354 66937.30032 70508.8875 77973.49968 65695.05762 69853.88227 57761.52053 63110.21214 74360.17814 65657.3422 1.117874728 1.019494516 1.073891893 1.187582334 1.000574428 1.063915777 0.879741985 0.961205709 1.132549318 1 16.00266873 -6.403550158 23.10108343 1.000925447 1.09238533 0.279565943 0.072748944 14.16617514 2697.48707 0.023138486 0.026236574 3.95E-07 6.403550158 0.091459883 SADTLWGIQK ddPTM_A459_MK2206_30min_R1 1 SADTLWGIQK 10 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 140.83 0.01904 11349000 2633.1 2549 2593.7 2234.8 2703.4 2347.9 2186.3 2279.9 2143.8 1839.2 FALSE TRUE 2409.141018 2383.059637 2417.64687 2406.924683 2595.717853 2480.836069 2040.455916 2259.967075 2366.655682 2067.053981 1.16549497 1.152877312 1.169609934 1.164422751 1.255757168 1.200179624 0.98713238 1.093327555 1.144941401 1 11.01336035 -7.241655726 24.76483478 1.064127627 1.184895119 0.613797101 0.049732721 530.9346803 664615.6956 0.019646738 0.015196726 5.73E-08 7.241655726 0.120767492 SADVSPTT(ph)EGVK ddPTM_A459_MK2206_30min_R2 1 SADVSPTTEGVK 12 0 A0A0J9YX34;Q9C040;Q9C040-2 A0A0J9YX34 TRIM2 Tripartite motif-containing protein 2 1 SADVS(0.238)PT(0.238)T(0.525)EGVK 127.56 0.0060239 4140000 24739 29692 25943 32672 30747 24442 29891 26501 24059 26306 TRUE FALSE 26633.03686 28217.53846 26807.92667 30002.59309 29539.71829 25372.15744 25966.27579 29964.77169 26151.60833 25447.63737 1.046581907 1.108847082 1.053454444 1.178993266 1.160803962 0.997033912 1.020380612 1.177507022 1.027663509 1 14.6352441 -6.757302764 24.99998346 1.054102678 1.11040759 0.211987892 0.061491788 209.7400338 1267581.186 0.021482236 0.020747702 1.75E-07 6.757302764 0.056304912 SAEALGPGALVS(ph)PR ddPTM_A459_MK2206_30min_R2 2 SAEALGPGALVSPR 14 0 Q9P227;Q9P227-2 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 SAEALGPGALVS(1)PR;SAEALGPGALVS(1)PR 146.1 0.00028347 0 58162 59809 75072 80973 75350 77290 88472 60152 62169 60639 TRUE FALSE 62614.92744 56838.97203 77574.86301 74357.24688 72391.3804 80231.32511 76855.52013 68014.07293 67576.34724 58660.3544 1.067414749 0.968950369 1.32244109 1.267589459 1.234076765 1.367726567 1.310178244 1.159455541 1.151993505 1 15.84009817 -5.256584548 24.99792502 1.24212179 1.018182543 0.389571808 0.102956382 364.9982814 1879391.089 0.025975408 0.064399695 5.54E-06 5.256584548 -0.223939247 SAEPPRS(ph)PLLK ddPTM_A459_MK2206_30min_R1 2 SAEPPRSPLLK 11 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;H7C1I9;O15021-2;O15021-3;O15021-6;O15021;Q9Y2H9 Q6P0Q8;H7C1I9;Q9Y2H9 MAST2;MAST4;MAST1 Microtubule-associated serine/threonine-protein kinase 2;Microtubule-associated serine/threonine-protein kinase 4;Microtubule-associated serine/threonine-protein kinase 1 1 SAEPPRS(1)PLLK;SAEPPRS(1)PLLK 84.734 0.019724 14109500 18281.8 19710.7 18225.4 15792.6 18089.5 17144.9 20232.3 17189 20294.4 21522.1 TRUE FALSE 16726.83691 18427.52985 16988.31063 17008.94879 17368.95691 18115.62942 18882.64018 17038.71839 22404.0755 24188.42023 0.691522503 0.761832715 0.702332375 0.7031856 0.71806909 0.748938097 0.78064793 0.704416337 0.926231448 1 14.56202893 -8.379842378 3.509123797 0.997166073 0.727926451 0.91659651 0.028878734 0.059186576 1.262347856 0.027909549 0.00744954 4.17E-09 8.379842378 -0.269239622 SAEPRPELGPGQETGTNS(ph)R ddPTM_A459_MK2206_30min_R1 4 SAEPRPELGPGQETGTNSR 19 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 SAEPRPELGPGQET(0.001)GT(0.002)NS(0.997)R;SAEPRPELGPGQET(0.002)GT(0.003)NS(0.995)R;SAEPRPELGPGQET(0.005)GT(0.031)NS(0.964)R;SAEPRPELGPGQETGT(0.011)NS(0.988)R 194.7 1.57E-14 66180100 6387.36 6077.28 5941.93 4708.83 5751.28 5183.14 5923.23 5071.95 4997.41 4636.26 TRUE FALSE 5844.081491 5681.647967 5538.608347 5071.504902 5522.194339 5476.604908 5528.102134 5027.606476 5516.908653 5210.634891 1.121568026 1.090394565 1.062943089 0.973298841 1.059792992 1.051043687 1.060926787 0.964874066 1.058778588 1 12.34724345 -5.322027512 2.628206156 1.026582523 1.111758815 0.47054735 0.034534928 0.250585408 3.326833635 0.009366359 0.027126341 4.76E-06 5.322027512 0.085176292 SAEPRPELGPGQETGTNS(ph)R ddPTM_A459_MK2206_30min_R2 2 SAEPRPELGPGQETGTNSR 19 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 SAEPRPELGPGQETGT(0.001)NS(0.999)R;SAEPRPELGPGQET(0.002)GT(0.013)NS(0.985)R 136.59 9.52E-05 163132000 53853 67154 53572 74401 49960 63923 60495 56014 51960 51078 TRUE FALSE 57976.02709 63819.23001 55358.06374 68322.2003 47998.31937 66355.63456 52551.93383 63335.22212 56479.38688 49411.32904 1.173334703 1.291591043 1.120351644 1.382723388 0.971403124 1.342923492 1.063560419 1.281795559 1.143045289 1 15.59255424 -14.33421971 0.235359527 1.29E-14 1.220121462 0.197809984 0.121758714 234.2772561 2.536502502 111.6451249 0.182230433 4.63E-15 14.33421971 1.220121462 SAEPSANTTLVS(ph)ETEEEGSVPAFGAAAK ddPTM_A459_MK2206_30min_R1 2 SAEPSANTTLVSETEEEGSVPAFGAAAK 28 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 SAEPSANT(0.003)T(0.011)LVS(0.571)ET(0.415)EEEGSVPAFGAAAK;SAEPSANTT(0.001)LVS(0.999)ETEEEGSVPAFGAAAK 166.61 6.90E-22 36247000 7250.8 7581.8 7586.7 4294.1 5253.7 7090.8 10221.7 5338.5 10541.1 14759.8 TRUE FALSE 6634.081385 7088.223442 7071.735942 4624.832326 5044.434004 7492.274968 9539.829044 5291.826057 11636.88507 16588.35545 0.399923995 0.427301155 0.426307235 0.278799929 0.304094883 0.451658694 0.575091911 0.31900848 0.701509266 1 14.01788325 -8.516139253 3.13914164 0.99898914 0.400720755 0.845674884 0.082218269 0.085668616 2.100013082 0.083902904 0.022318037 3.05E-09 8.516139253 -0.598268385 down SAEPSANTTLVSET(ph)EEEGSVPAFGAAAK ddPTM_A459_MK2206_30min_R2 1 SAEPSANTTLVSETEEEGSVPAFGAAAK 28 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 SAEPS(0.001)ANT(0.019)T(0.015)LVS(0.311)ET(0.396)EEEGS(0.258)VPAFGAAAK 50.189 0.037534 3568800 18331 14427 14014 13639 12081 8501.2 15141 12929 7594.5 16481 TRUE FALSE 19734.43545 13710.57616 14481.21977 12524.65007 11606.63924 8824.719123 13152.96851 14618.86469 8255.055882 15943.22632 1.23779435 0.859962462 0.908299203 0.78557814 0.727998148 0.553508992 0.824987882 0.916932646 0.517778254 1 13.96065599 -1.522897779 0.863919063 0.753224412 186.2651917 0.483140394 0.143066368 600.4683611 1.563530167 0.047226067 219144.737 0.029998685 1.522897779 185.5119673 SAEPSPTVMS(ph)TSLGSNLSELDR ddPTM_A459_MK2206_30min_R2 1 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 SAEPSPTVMS(0.328)T(0.328)S(0.328)LGS(0.017)NLSELDR 156.51 6.21E-09 17959000 14471 13687 13722 19094 21787 23960 26978 23980 29223 29708 TRUE FALSE 15578.91089 13007.32348 14179.48463 17533.95912 20931.53291 24871.81459 23435.75619 27114.26834 31764.76372 28738.63039 0.542089538 0.452607633 0.493394586 0.610118119 0.728341352 0.865448849 0.81547923 0.943478098 1.105298453 1 14.81070369 -6.689070074 0.657102546 1.035707388 0.450932574 0.929092777 0.057174962 0.191295537 0.182454716 0.044790985 0.051249736 2.05E-07 6.689070074 -0.584774814 SAEPSPTVMSTS(ph)LGSNLSELDR ddPTM_A459_MK2206_30min_R1 2 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 SAEPSPTVMST(0.118)S(0.875)LGS(0.007)NLSELDR;SAEPSPTVMS(0.008)T(0.048)S(0.943)LGSNLSELDR 288.96 6.76E-157 3769600 2842.16 3310.76 3454.29 3138.3 4364.7 4512.8 5569.7 5984.2 5576.7 5576.4 TRUE FALSE 2600.419367 3095.228922 3219.822419 3380.01241 4190.844757 4768.310836 5198.155475 5931.88077 6156.417921 6267.246532 0.414922144 0.49387381 0.513753911 0.539313779 0.668689948 0.760830264 0.829416148 0.946489138 0.98231622 1 12.61361603 -6.846695355 0.629314495 1.017560535 0.429553129 0.989903684 0.020930711 0.070808169 0.060713327 0.01718047 0.017280466 1.42E-07 6.846695355 -0.588007406 down SAEPSPTVMSTS(ph)LGSNLSELDR ddPTM_A459_MK2206_30min_R2 1 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 SAEPSPTVMS(0.015)T(0.015)S(0.966)LGS(0.003)NLS(0.001)ELDR 166.34 1.17E-11 18707000 11135 8648 10446 11655 13020 15232 21899 13642 19374 18756 TRUE FALSE 11987.50416 8218.552895 10794.26443 10702.74922 12508.76938 15811.66443 19023.63499 15425.05624 21059.1155 18143.99326 0.660687203 0.45296274 0.594922202 0.589878373 0.689416558 0.871454492 1.048481154 0.850146714 1.160665968 1 14.14720439 -6.756359662 1.487139078 1.012290356 0.559176857 0.844927249 0.086011097 0.139075151 0.640431978 0.036502421 0.033217595 1.75E-07 6.756359662 -0.453113499 SAEQHLISMCEDHDR ddPTM_A459_MK2206_30min_R1 1 SAEQHLISMCEDHDR 15 0 Q9Y223-5;Q9Y223-4;Q9Y223-3;Q9Y223;Q9Y223-2 Q9Y223-5 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase 0 106.52 0.0024117 6774000 2810.2 2276.2 2734.6 2385.4 3423.1 3162.4 2801.9 2757.6 2204 1821.6 FALSE TRUE 2571.177733 2128.018966 2548.982971 2569.123921 3286.750678 3341.452355 2614.990363 2733.490594 2433.113687 2047.27356 1.255903355 1.039440458 1.245062223 1.254900161 1.605428186 1.632147467 1.277303832 1.335185804 1.188465349 1 10.99948818 -5.792726643 2.808920609 1.36979842 1.154637849 0.113417241 0.183531454 0.444697185 7.157311023 0.055048769 0.095380724 1.61E-06 5.792726643 -0.215160571 SAES(ph)PSWTPAEHVAK ddPTM_A459_MK2206_30min_R1 2 SAESPSWTPAEHVAK 15 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 SAES(0.848)PS(0.152)WTPAEHVAK;SAES(0.73)PS(0.226)WT(0.044)PAEHVAK 230.23 7.07E-14 37945000 4346.1 3743.6 3389.1 3854.6 3665.7 3797.4 3743.1 2931.7 2609.3 2032.21 TRUE FALSE 3976.441373 3499.89096 3159.057335 4151.48196 3519.687407 4012.405506 3493.404629 2906.068456 2880.546072 2283.975517 1.741017512 1.532367984 1.383139754 1.817656069 1.541035523 1.756763799 1.529528054 1.272372858 1.261198314 1 11.15733147 -8.062558413 1.273107286 1.045467933 1.622365936 0.719171221 0.129622776 0.239082264 0.705820737 0.118875242 0.039875419 8.66E-09 8.062558413 0.576898004 SAES(ph)PSWTPAEHVAK ddPTM_A459_MK2206_30min_R2 3 SAESPSWTPAEHVAK 15 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 S(0.004)AES(0.491)PS(0.491)WT(0.013)PAEHVAK;SAES(0.999)PS(0.001)WTPAEHVAK;SAES(0.987)PS(0.013)WTPAEHVAK 223.14 3.42E-21 33927700 167246 188890 172227 206093 196482 182408 223838 160104 150357 186092 TRUE FALSE 180050.4824 179509.9973 177968.9622 189254.5426 188767.1294 189349.6643 194447.8017 181030.1425 163434.7801 180019.8333 1.000170254 0.99716789 0.988607527 1.051298289 1.048590736 1.051826684 1.080146549 1.005612211 0.907870967 1 17.45779634 -8.012185548 24.24668942 0.954870826 1.031309775 0.443386308 0.034217825 359.2436263 714813.9772 0.022117603 0.009327556 9.72E-09 8.012185548 0.07643895 SAES(ph)PTSPVTSETGSTFK ddPTM_A459_MK2206_30min_R1 3 SAESPTSPVTSETGSTFK 18 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 S(0.03)AES(0.969)PT(0.001)SPVTSETGSTFK;S(0.002)AES(0.998)PTSPVTSETGSTFK;S(0.001)AES(0.998)PT(0.001)SPVTSETGSTFK 269.91 5.59E-54 89429000 10989.3 11167.5 11558.2 8657.1 10234.3 10741 11571.8 10513.1 10971.4 11888.8 TRUE FALSE 10054.60233 10440.49372 10773.66159 9323.871342 9826.64616 11349.14614 10799.86634 10421.18508 12111.91629 13361.6743 0.75249569 0.781376157 0.806310747 0.697807111 0.735435241 0.84938054 0.808271935 0.779931081 0.906466961 1 13.70581318 -8.598309011 0.703239293 1.004083136 0.763137648 0.765517328 0.040548677 0.419078535 0.463007857 0.042545851 0.016503921 2.52E-09 8.598309011 -0.240945488 SAES(ph)PTSPVTSETGSTFK ddPTM_A459_MK2206_30min_R2 3 SAESPTSPVTSETGSTFK 18 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SAES(0.997)PT(0.002)SPVTSETGSTFK;SAES(0.975)PT(0.024)S(0.001)PVTSETGSTFK;S(0.001)AES(0.966)PT(0.033)SPVTSETGSTFK 276.38 2.46E-55 63157700 166179 161213 164972 167317 177246 149470 205238 145406 133307 180150 TRUE FALSE 178901.792 153207.3968 170472.0841 153646.6659 170286.4315 155158.1856 178290.0041 164411.0635 144901.8019 174271.7203 1.026568119 0.879129423 0.978197059 0.881650021 0.977131753 0.890323372 1.023057578 0.943417918 0.831470543 1 17.41097895 -5.473749588 0.001188806 1.398086306 0.481691304 0 0.064894069 11637502.25 2870.03816 1099117.169 1113280.714 3.36E-06 5.473749588 -0.916395003 SAES(ph)PTSPVTSETGSTFKK ddPTM_A459_MK2206_30min_R1 1 SAESPTSPVTSETGSTFKK 19 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 S(0.007)AES(0.641)PT(0.346)S(0.006)PVTSETGSTFKK 119.94 0.00022584 22349000 2375 2652.4 2518.6 1635.9 2265 2269.3 2104.7 2572.2 1558.8 1421.4 TRUE FALSE 2172.993778 2479.728278 2347.644449 1761.897301 2174.780254 2397.785805 1964.299303 2549.711527 1720.842838 1597.493763 1.360251807 1.552261633 1.469579728 1.102913415 1.361370106 1.50096724 1.229613128 1.596069785 1.07721412 1 10.64159458 -8.415089648 6.072527365 1.00267433 1.390487133 0.511750611 0.140621083 0.176715215 7.846554715 0.135077212 0.035020813 3.85E-09 8.415089648 0.387812802 SAES(ph)PTSPVTSETGSTFKK ddPTM_A459_MK2206_30min_R2 2 SAESPTSPVTSETGSTFKK 19 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 S(0.011)AES(0.735)PT(0.251)S(0.003)PVTSETGSTFKK;S(0.003)AES(0.873)PT(0.104)S(0.021)PVTSETGSTFKK 123.14 0.00021318 65177000 61497 85930 77817 84792 104407 90075 90457 66010 93591 82045 TRUE FALSE 66205.2576 81662.84115 80411.37994 77864.22236 100307.4566 93502.86724 78579.88724 74637.73365 101731.376 79367.87837 0.834156827 1.028915511 1.013147656 0.981054602 1.263829381 1.178094579 0.990071662 0.940402278 1.281770133 1 16.27626762 -3.905539903 0.868961535 1.092454256 2.41E-13 0.306851232 0.113875521 11.78808208 2.258730702 0.040264685 17.62469898 0.000124297 3.905539903 -1.092454256 SAES(ph)PVLVVTR ddPTM_A459_MK2206_30min_R1 1 SAESPVLVVTR 11 0 Q9C0G0-3;Q9C0G0-2;Q9C0G0 Q9C0G0-3 ZNF407 Zinc finger protein 407 1 SAES(1)PVLVVTR 101.38 0.013542 0 1305.6 1214.1 1009.5 1047.9 1535 1287.4 1273.1 1333.9 1357.7 1056 TRUE FALSE 1194.551864 1135.061869 940.9779526 1128.60944 1473.8577 1360.291475 1188.173822 1322.237853 1498.837774 1186.825252 1.00651032 0.956385 0.792852992 0.950948286 1.241848955 1.146159869 1.001136283 1.114096494 1.262896766 1 10.21289181 -6.119553805 6.492760049 1.127347503 0.914557814 0.521989286 0.094517658 0.196369442 9.684619512 0.028581189 0.037141645 7.59E-07 6.119553805 -0.212789689 SAES(ph)PVLVVTR ddPTM_A459_MK2206_30min_R2 2 SAESPVLVVTR 11 0 Q9C0G0-3;Q9C0G0-2;Q9C0G0 Q9C0G0-3 ZNF407 Zinc finger protein 407 1 S(0.006)AES(0.994)PVLVVTR;S(0.392)AES(0.608)PVLVVTR 100.02 0.016677 5407300 20820.2 22730 20445 29186 26637 29743 26001 22567 25491 22879 TRUE FALSE 22414.21052 21601.26125 21126.6261 26801.41044 25591.09754 30874.89071 22587.03747 25516.58438 27708.1611 22132.4601 1.01273019 0.975999105 0.954553899 1.210954874 1.156269905 1.395004919 1.020538944 1.152903214 1.251924141 1 14.4338762 -5.760337733 24.99975958 1.178646052 0.980584835 0.395977989 0.106316668 27.70301619 628631.8037 0.028704916 0.046342359 1.74E-06 5.760337733 -0.198061217 SAESPT(ph)SPVTSETGSTFK ddPTM_A459_MK2206_30min_R2 1 SAESPTSPVTSETGSTFK 18 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 S(0.003)AES(0.147)PT(0.781)S(0.066)PVTS(0.003)ETGSTFK 95.9 0.0090947 56741000 30410 38659 35881 35680 30374 26061 38414 31717 29676 38587 TRUE FALSE 32738.21298 36739.25028 37077.25463 32764.82987 29181.36414 27052.76962 33370.19566 35862.5208 32257.16484 37327.90935 0.877043841 0.984230055 0.993285059 0.877756897 0.78175726 0.724733051 0.893974408 0.960742818 0.86415675 1 15.18796709 -5.880103109 6.350127049 0.860009222 0.954169511 0.164685166 0.079860075 0.345346293 17.80973827 0.02398833 0.035938258 1.32E-06 5.880103109 0.094160289 SAESPT(ph)SPVTSETGSTFKK ddPTM_A459_MK2206_30min_R1 1 SAESPTSPVTSETGSTFKK 19 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 S(0.003)AES(0.087)PT(0.904)S(0.006)PVTSETGSTFKK 135.23 0.00024023 13411000 2577.6 3279.1 3188.2 2981.4 2857.4 2826.8 2195.8 2868.7 1810.1 1466.1 TRUE FALSE 2358.361584 3065.629994 2971.793867 3211.027945 2743.583707 2986.850973 2049.322188 2843.619258 1998.266373 1647.731536 1.43127781 1.860515458 1.803566783 1.948756744 1.665067183 1.812704865 1.243723351 1.725778257 1.212737833 1 10.68626549 -8.262991543 0.656993346 0.997489265 1.774147017 0.598840479 0.195511291 0.474907805 0.471568424 0.186318862 0.082038864 5.46E-09 8.262991543 0.776657752 SAESPTS(ph)PVTSETGSTFK ddPTM_A459_MK2206_30min_R1 2 SAESPTSPVTSETGSTFK 18 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SAESPT(0.003)S(0.997)PVTSETGSTFK;SAESPT(0.07)S(0.912)PVTS(0.018)ETGSTFK 302.84 8.03E-96 91347000 13650.5 9339.4 7621.7 5414.4 6025.2 5182.1 5917.2 5048.8 4969.4 5422.9 TRUE FALSE 12489.45329 8731.403362 7104.360239 5831.418026 5785.203525 5475.506024 5522.474385 5004.658874 5485.986913 6094.729793 2.049221822 1.432615335 1.16565631 0.95679681 0.949214112 0.898400128 0.906106517 0.821145325 0.900119792 1 12.57334655 -4.039013469 0.792120716 0.889602743 4.853271119 0.982544975 0.046981276 0.77470215 0.159329409 0.016502955 3.569904684 9.14E-05 4.039013469 3.963668376 up SAESPTS(ph)PVTSETGSTFKK ddPTM_A459_MK2206_30min_R1 1 SAESPTSPVTSETGSTFKK 19 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 S(0.001)AES(0.043)PT(0.237)S(0.719)PVTSETGSTFKK 129.75 0.00015478 30741000 4215.9 2665.9 2135.7 1819.5 2083 1856.2 1788.5 2123.3 1315.1 920.62 TRUE FALSE 3857.315566 2492.349425 1990.734634 1959.638205 2000.029699 1961.29644 1669.192428 2104.736212 1451.809351 1034.673356 3.72805151 2.408827299 1.924022324 1.893967979 1.933005898 1.895570644 1.613255448 2.034203548 1.403157183 1 10.01495967 -2.044910485 0.802506225 1.697219364 199.9999994 0.831904155 0.280776788 72.40867315 0.639622368 0.093921571 25592.70682 0.00901757 2.044910485 198.3027801 up SAESPTS(ph)PVTSETGSTFKK ddPTM_A459_MK2206_30min_R2 1 SAESPTSPVTSETGSTFKK 19 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SAES(0.018)PT(0.258)S(0.719)PVT(0.005)SETGSTFKK 97.081 0.00080957 10186000 26869 35371 23228 29357 31049 22805 22449 15835 16928 18456 TRUE FALSE 28926.1113 33614.52757 24002.40993 26958.43919 29829.86025 23672.86026 19501.41933 17904.68887 18400.36684 17853.78223 1.62016714 1.882767872 1.344387963 1.509956761 1.670786608 1.325929708 1.092285045 1.002851308 1.0306145 1 14.12394211 -7.082370598 2.097402484 1.016082347 1.604149184 0.813852048 0.129242338 0.142776555 1.242176721 0.061514574 0.045273862 8.27E-08 7.082370598 0.588066836 SAESPTSPVTS(ph)ETGSTFK ddPTM_A459_MK2206_30min_R2 1 SAESPTSPVTSETGSTFK 18 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SAESPT(0.033)S(0.258)PVT(0.058)S(0.648)ET(0.003)GSTFK 126.5 0.00077389 7138200 52156 35101 32376 30442 23931 21675 30047 23003 18678 24431 TRUE FALSE 56149.10346 33357.93538 33455.39968 27954.79122 22991.3487 22499.85731 26101.79281 26009.57108 20302.57868 23633.81847 2.375794818 1.411449251 1.415573185 1.182830073 0.972815659 0.952019554 1.104425543 1.100523435 0.859047754 1 14.52856512 -1.522878745 0.708619167 1.00765751 178.1608745 0.930899859 0.109913625 69.83388863 0.357936502 0.042754212 19629.21478 0.03 1.522878745 177.153217 up SAFS(ph)PYQTPVAHFPPPPEEPTATAAFGAR ddPTM_A459_MK2206_30min_R2 2 SAFSPYQTPVAHFPPPPEEPTATAAFGAR 29 0 A0A0A0MQV9;Q9UPS6-2;Q9UPS6 A0A0A0MQV9 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B 1 S(0.212)AFS(0.716)PY(0.036)QT(0.036)PVAHFPPPPEEPTATAAFGAR;S(0.387)AFS(0.525)PY(0.022)QT(0.066)PVAHFPPPPEEPTATAAFGAR 95.679 1.19E-07 13712000 7943.3 8437.5 9403.4 6318.1 10242.7 8710.4 7669.4 5421.4 5730.7 7205.57 TRUE FALSE 8551.445155 8018.506019 9716.904663 5801.891019 9840.520133 9041.880376 6662.398567 6129.995594 6229.145927 6970.452841 1.22681343 1.150356541 1.3940134 0.832354963 1.411747609 1.297172591 0.955805701 0.879425732 0.893650107 1 12.76703667 -7.339773299 5.783302519 0.917525899 1.214417238 0.452740003 0.154222694 0.21308388 12.17290576 0.064491017 0.04313522 4.57E-08 7.339773299 0.296891338 SAGAENPRPFS(ph)PPRAPPPPPPPPPPPPR ddPTM_A459_MK2206_30min_R1 2 SAGAENPRPFSPPRAPPPPPPPPPPPPR 28 2 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(0.004)AGAENPRPFS(0.996)PPRAPPPPPPPPPPPPR;SAGAENPRPFS(1)PPRAPPPPPPPPPPPPR 97.662 1.18E-06 27332000 1065.02 552.64 824.7 706.17 1273.06 774.77 988.16 1037.29 618.23 639.62 TRUE FALSE 974.4344564 516.6630356 768.7216617 760.5593358 1222.351324 818.6368079 922.2416494 1028.221083 682.4972209 718.8609545 1.355525641 0.718724577 1.069360711 1.058006185 1.700400219 1.138797152 1.28292077 1.430347658 0.949414788 1 9.489568934 -6.031982182 24.98904014 1.278005176 1.023076804 0.127715431 0.247301854 1039.860619 812485.9651 0.069611983 0.089955371 9.29E-07 6.031982182 -0.254928371 SAGAGSPARPPS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SAGAGSPARPPSPR 14 1 P83369 P83369 LSM11 U7 snRNA-associated Sm-like protein LSm11 1 SAGAGSPARPPS(1)PR 73.168 0.027361 7714000 37394 37482 35526 41796 47574 41780 41636 30605 42938 41916 TRUE FALSE 40256.91339 35620.69838 36710.41911 38381.1331 45706.00572 43369.96718 36169.14319 34605.17858 46672.66963 40548.28435 0.992814222 0.878476092 0.905350737 0.946553811 1.127199497 1.069588217 0.892001814 0.853431388 1.151039319 1 15.30735325 -6.015949191 24.48743254 1.007661611 0.92169196 0.171073893 0.091157694 1071.967913 1645838.684 0.028036395 0.037333952 9.64E-07 6.015949191 -0.085969651 SAGALEEGTSEGQLCGRS(ph)AR ddPTM_A459_MK2206_30min_R1 1 SAGALEEGTSEGQLCGRSAR 20 1 H7BXQ8;C9J5N7;Q8N2F6-3;Q8N2F6 H7BXQ8 ARMC10 Armadillo repeat-containing protein 10 1 SAGALEEGTSEGQLCGRS(1)AR 58.712 0.019047 10792000 2190.1 2320 1978.3 1776.2 2095.1 2172 1938.6 1758.7 1671.8 1509.1 TRUE FALSE 2003.820494 2168.967578 1844.018508 1913.003232 2011.647731 2294.976763 1809.279531 1743.323871 1845.589593 1696.058701 1.181457041 1.278828131 1.087237433 1.12791098 1.186071997 1.353123428 1.066755254 1.02786765 1.088163748 1 10.72797039 -7.491865484 24.66919906 1.044271671 1.197658949 0.53113781 0.072365515 479.9291414 381756.0857 0.031412607 0.021149211 3.22E-08 7.491865484 0.153387278 SAGGSSPEGGEDS(ph)DREDGNYCPPVK ddPTM_A459_MK2206_30min_R2 2 SAGGSSPEGGEDSDREDGNYCPPVK 25 1 Q9H6Z4;Q9H6Z4-3;Q9H6Z4-2;B7Z7F3;K7EID7;K7ENB9 Q9H6Z4 RANBP3 Ran-binding protein 3 1 SAGGSS(0.001)PEGGEDS(0.996)DREDGNY(0.003)CPPVK;SAGGS(0.001)S(0.001)PEGGEDS(0.999)DREDGNYCPPVK 109.71 1.16E-07 50518000 89303 82360 83571 96199 75566 79660 95113 77774 64399 91355 TRUE FALSE 96140.10634 78270.12216 86357.21543 88339.23397 72598.89915 82691.51712 82624.54885 87939.32884 70000.30861 88374.09383 1.087876573 0.885668172 0.977177945 0.999605542 0.82149526 0.935698614 0.934940832 0.995080402 0.792090822 1 16.4313359 -4.752074327 24.99152349 0.92778973 1.087876889 0.322775291 0.069956912 445.198902 1187970.162 0.01661248 0.205701793 1.77E-05 4.752074327 0.160087158 SAGGSSPEGGEDS(ph)DREDGNYCPPVKR ddPTM_A459_MK2206_30min_R1 1 SAGGSSPEGGEDSDREDGNYCPPVKR 26 2 Q9H6Z4;Q9H6Z4-3;Q9H6Z4-2;B7Z7F3;K7EID7;K7ENB9 Q9H6Z4 RANBP3 Ran-binding protein 3 1 SAGGS(0.076)S(0.023)PEGGEDS(0.821)DREDGNY(0.079)CPPVKR 65.189 0.0018971 9379100 889.46 944.49 1203 946.59 1183.1 1057.3 1050.6 968.91 774.44 612.74 TRUE FALSE 813.8067563 883.0035293 1121.343712 1019.496526 1135.974622 1117.163412 980.5163909 960.438922 854.9458094 688.6508572 1.181740715 1.282222363 1.628319634 1.480425843 1.649565393 1.62224936 1.423822218 1.394667431 1.241479337 1 9.427628918 -8.485554841 1.451282647 1.002974686 1.479412799 0.515422507 0.14208222 0.361947347 1.675308435 0.147536191 0.044036914 3.27E-09 8.485554841 0.476438114 SAGGSSPEGGEDS(ph)DREDGNYCPPVKR ddPTM_A459_MK2206_30min_R2 3 SAGGSSPEGGEDSDREDGNYCPPVKR 26 2 Q9H6Z4;Q9H6Z4-3;Q9H6Z4-2;B7Z7F3;K7EID7;K7ENB9 Q9H6Z4 RANBP3 Ran-binding protein 3 1 S(0.002)AGGS(0.039)S(0.112)PEGGEDS(0.847)DREDGNY(0.001)CPPVKR;SAGGS(0.002)S(0.002)PEGGEDS(0.911)DREDGNY(0.084)CPPVKR;SAGGS(0.003)S(0.006)PEGGEDS(0.766)DREDGNY(0.225)CPPVKR 65.189 0.0018971 95828000 66487.4 77304 78457 82168 85209 77865 95178 67088 74097 85224 TRUE FALSE 71577.72646 73465.19577 81072.71722 75454.61156 81863.26652 80828.20714 82681.01427 75856.63195 80541.82312 82443.14786 0.868207102 0.891101294 0.983377265 0.915232054 0.992966288 0.980411462 1.002885217 0.920108389 0.976937747 1 16.33111197 -4.979789769 1.263080291 0.972006202 0.834687188 0.592868624 0.029976612 0.711627883 1.269014128 0.009001203 0.116255222 1.05E-05 4.979789769 -0.137319015 SAGQGEVLVYVEDPAGHQEEAK ddPTM_A459_MK2206_30min_R1 1 SAGQGEVLVYVEDPAGHQEEAK 22 0 P21333-2;P21333;Q60FE5;A0A087WWY3;F8WE98 P21333-2 FLNA Filamin-A 0 154.13 7.94E-08 10860000 1860.7 1844.8 2201.4 1914 1966.4 1610.2 1909.7 1876.1 1943.8 1729.2 FALSE TRUE 1702.437694 1724.703185 2051.975101 2061.416612 1888.074124 1701.368132 1782.307397 1859.697455 2145.864966 1943.426351 0.87599805 0.887454873 1.055854317 1.060712494 0.971518228 0.875447702 0.917095416 0.956916867 1.104165828 1 10.92438672 -5.150200132 7.844043718 0.98586522 0.879421106 0.312085078 0.065339165 0.381535613 24.12312267 0.018260532 0.048925977 7.08E-06 5.150200132 -0.106444114 SAGQGEVLVYVEDPAGHQEEAK ddPTM_A459_MK2206_30min_R2 2 SAGQGEVLVYVEDPAGHQEEAK 22 0 P21333-2;P21333;Q60FE5;A0A087WWY3;F8WE98 P21333-2 FLNA Filamin-A 0 ; 167.34 1.46E-11 11388800 109517 137547 125454 134265 143264 114041 151312 119216 126485 138831 FALSE TRUE 117901.7057 130716.616 129636.5737 123295.12 137638.7355 118380.9102 131444.5526 134797.9405 137486.4367 134300.9558 0.877891784 0.973311137 0.965269182 0.918050949 1.024852985 0.881459923 0.978731326 1.00370053 1.023718974 1 17.03511005 -7.516857448 7.588094534 1.006808096 0.944338765 0.35905015 0.041430859 0.149288043 64.18778395 0.017875941 0.011026022 3.04E-08 7.516857448 -0.06246933 SAGQS(ph)SPAKEGPLDLYPK ddPTM_A459_MK2206_30min_R2 1 SAGQSSPAKEGPLDLYPK 18 1 Q5VV67-2;Q5VV67;E7EVG6 Q5VV67-2 PPRC1 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 1 S(0.017)AGQS(0.491)S(0.491)PAKEGPLDLYPK 61.962 0.023992 5764100 15806 36825 28663 25573 44490 28670 37853 23972 38776 28180 TRUE FALSE 17016.11951 34996.32405 29618.61011 23483.6041 42743.09906 29761.05694 32882.85563 27105.22271 42148.66639 27260.48891 0.624204488 1.28377463 1.086503262 0.861452052 1.567950568 1.091728657 1.206245997 0.99430435 1.546144918 1 14.73452382 -4.754784058 24.99692337 1.178828077 0.624203548 0.367903853 0.219310235 243.7086181 915269.5168 0.051753953 0.488139956 1.76E-05 4.754784058 -0.554624529 SAGQSS(ph)PAKEGPLDLYPK ddPTM_A459_MK2206_30min_R2 1 SAGQSSPAKEGPLDLYPK 18 1 Q5VV67-2;Q5VV67;E7EVG6 Q5VV67-2 PPRC1 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 1 S(0.002)AGQS(0.212)S(0.786)PAKEGPLDLYPK 69.522 0.013998 4298900 16970 31393 25567 23326 35826 22896 35377 20085 33795 29849 TRUE FALSE 18269.23625 29834.06927 26419.39102 21420.19118 34419.29123 23767.32332 30731.9574 22710.17846 36734.42801 28875.02957 0.632700174 1.033213462 0.914956328 0.741824043 1.192008865 0.823109921 1.064309123 0.786498881 1.27218668 1 14.8175348 -4.754709274 24.96355219 0.968969663 0.632699592 0.289274499 0.162772867 290.0696806 1075838.292 0.03731546 0.355195039 1.76E-05 4.754709274 -0.336270072 SALAPNLLTS(ph)GK ddPTM_A459_MK2206_30min_R1 2 SALAPNLLTSGK 12 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 SALAPNLLT(0.063)S(0.937)GK;SALAPNLLT(0.088)S(0.912)GK 167.73 0.00041747 25491000 10046.4 9513.2 9231 8104.1 7857.6 7400.3 7580.1 7549.3 7370 7145.4 TRUE FALSE 9191.900924 8893.888951 8604.425439 8728.279186 7544.615153 7819.298591 7074.44536 7483.297266 8136.137874 8030.626097 1.144605765 1.107496333 1.071451383 1.086874059 0.939480317 0.973684803 0.880933227 0.931844812 1.013138674 1 12.97129675 -6.216074785 4.447288188 0.949770959 1.103307383 0.770860226 0.038957221 0.101675054 4.526455898 0.012164792 0.015556549 6.08E-07 6.216074785 0.153536424 SALAPNLLTS(ph)GK ddPTM_A459_MK2206_30min_R2 2 SALAPNLLTSGK 12 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 SALAPNLLT(0.081)S(0.919)GK;SALAPNLLT(0.172)S(0.828)GK 148.85 0.00059175 14151600 195509 178801 166850 183850 180778 123313 197784 137783 115852 165174 TRUE FALSE 210477.3194 169922.0023 172412.6957 168828.8669 173679.7474 128005.7626 171814.7232 155791.7112 125928.5975 159784.3859 1.317258368 1.063445601 1.079033441 1.056604285 1.0869632 0.80111559 1.07529107 0.97501211 0.78811579 1 17.28576691 -1.522878745 0.404505942 0.933713662 6.703650626 0.550838729 0.096316391 57.98044117 0.763499283 0.0676587 267.5558685 0.03 1.522878745 5.769936963 SALEDKERDEDDEDGDGDGDGATGK ddPTM_A459_MK2206_30min_R1 2 SALEDKERDEDDEDGDGDGDGATGK 25 2 P50579-3;P50579;G3V1U3;F8VQZ7 P50579-3 METAP2 Methionine aminopeptidase 2 0 ; 75.106 0.00019865 13427800 6736.8 7237.7 7694.3 7073.8 6154.7 4927.9 5883.1 6647.7 6598.8 5274.4 FALSE TRUE 6163.799784 6766.524414 7172.032354 7618.625302 5909.545266 5206.913439 5490.649133 6589.57986 7284.768874 5927.832492 1.039806673 1.141483742 1.209891198 1.285229519 0.996915023 0.878384038 0.926249036 1.111633952 1.228909367 1 12.53328897 -6.287045526 24.65258162 1.017127047 1.170043465 0.305792426 0.107063796 851.9832416 820253.2994 0.036718378 0.041650388 5.16E-07 6.287045526 0.152916418 SALEDKERDEDDEDGDGDGDGATGK ddPTM_A459_MK2206_30min_R2 1 SALEDKERDEDDEDGDGDGDGATGK 25 2 P50579-3;P50579;G3V1U3;F8VQZ7 P50579-3 METAP2 Methionine aminopeptidase 2 0 99.414 2.85E-06 14285000 161260 208570 175560 182410 220360 128360 219120 185990 156760 205770 FALSE TRUE 173606.1896 198212.7171 181413.0828 167506.5195 211707.5592 133244.8297 190349.2808 210299.5316 170394.7014 199055.7418 0.872148616 0.995764881 0.911368249 0.84150559 1.063559168 0.669384508 0.956261192 1.056485634 0.856015003 1 17.60281296 -7.502522686 24.96461109 0.975024922 0.895793203 0.105392297 0.107038502 1723.651461 2113888.096 0.043882181 0.029179384 3.14E-08 7.502522686 -0.07923172 SALLTQNGTGS(ph)LPR ddPTM_A459_MK2206_30min_R1 1 SALLTQNGTGSLPR 14 0 Q86UU1-3;Q86UU1-2;Q86UU1;A0A087WZL0 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 SALLTQNGT(0.023)GS(0.977)LPR 80.719 0.033395 6482000 1924.6 992.09 1146.2 1049.6 1861 2143.9 1633.6 1384.4 743.1 658.25 TRUE FALSE 1760.902664 927.5047607 1068.399137 1130.440374 1786.872429 2265.285765 1524.625525 1372.296337 820.3479042 739.7989795 2.380244786 1.253725385 1.444174927 1.528037217 2.4153486 3.062028778 2.060864595 1.854958407 1.108879475 1 9.5309895 -6.227400163 24.67471327 2.024204715 1.608317594 0.023211551 0.624649609 1470.21858 1065747.053 0.191338665 0.247002729 5.92E-07 6.227400163 -0.415887121 SALPVSPSIS(ph)SAPVPVEIENLPQSPGTDQHDR ddPTM_A459_MK2206_30min_R2 2 SALPVSPSISSAPVPVEIENLPQSPGTDQHDR 32 0 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 SALPVS(0.008)PS(0.032)IS(0.48)S(0.48)APVPVEIENLPQSPGTDQHDR;SALPVSPS(0.005)IS(0.45)S(0.45)APVPVEIENLPQS(0.074)PGT(0.021)DQHDR 89.968 1.09E-07 10231900 31467.7 30258.2 30684.2 28534.2 21161.1 26083.8 25066.5 18991.6 22472.9 23489.8 TRUE FALSE 33876.89131 28755.62179 31707.19591 26202.86458 20330.20889 27076.43729 21775.23844 21473.86733 24427.55222 22723.32975 1.490841865 1.265466906 1.395358702 1.153126099 0.894684411 1.191569967 0.958276744 0.945014114 1.0749988 1 14.47188663 -5.9199837 3.635572709 1.014128422 1.372013025 0.764729044 0.092264311 0.107571114 2.813429109 0.02595002 0.039832486 1.20E-06 5.9199837 0.357884604 SALPVSPSISSAPVPVEIENLPQS(ph)PGTDQHDR ddPTM_A459_MK2206_30min_R1 2 SALPVSPSISSAPVPVEIENLPQSPGTDQHDR 32 0 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 SALPVSPSISSAPVPVEIENLPQS(0.901)PGT(0.099)DQHDR;SALPVSPSISSAPVPVEIENLPQS(0.937)PGT(0.063)DQHDR 104.72 8.21E-12 12419800 2589.9 2267.24 2104.86 1380.74 1755.42 1896.65 2359.73 1601.54 1684.33 2199.71 TRUE FALSE 2369.615405 2119.642264 1961.987968 1487.084834 1685.497904 2004.036684 2202.316717 1587.537905 1859.422131 2472.226682 0.95849439 0.857381841 0.793611679 0.601516376 0.681773203 0.810620118 0.890823133 0.642149005 0.752124449 1 11.27159532 -5.029055206 2.292560652 0.754702555 0.961118062 0.209140578 0.111565745 0.539389286 4.762913307 0.029941129 0.181972683 9.35E-06 5.029055206 0.206415507 SALPVSPSISSAPVPVEIENLPQS(ph)PGTDQHDR ddPTM_A459_MK2206_30min_R2 1 SALPVSPSISSAPVPVEIENLPQSPGTDQHDR 32 0 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 SALPVSPSISSAPVPVEIENLPQS(0.777)PGT(0.223)DQHDR 99.176 4.69E-09 5376700 15949 13261 13611 16342 10339 10540 8616.3 11600 10494 12211 TRUE FALSE 17170.0677 12602.47802 14064.78395 15006.80632 9933.038911 10941.10709 7484.96946 13116.15983 11406.74915 11812.55607 1.453543805 1.066871382 1.190663889 1.270411436 0.840888191 0.926226891 0.633645201 1.110357466 0.965646138 1 13.52803356 -6.259025306 24.98445442 0.905026057 1.228714784 0.553454863 0.145943283 170.1620754 1761092.847 0.043900709 0.053981076 5.51E-07 6.259025306 0.323688727 SALS(ph)LSKSPAK ddPTM_A459_MK2206_30min_R1 1 SALSLSKSPAK 11 1 Q99666;O14715;J3KQ37 Q99666 RGPD5;RGPD8 RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 S(0.005)ALS(0.494)LS(0.307)KS(0.193)PAK 128.57 0.013063 14656000 2439.7 2895.4 2856.1 2396.4 2164.5 2060.6 2126.9 2503.4 1881.2 1150.1 TRUE FALSE 2232.190704 2706.908934 2662.23589 2580.971143 2078.283382 2177.269391 1985.018382 2481.513038 2076.757472 1292.583071 1.726922435 2.094185662 2.0596246 1.996754562 1.607852856 1.684432854 1.535698886 1.919809329 1.606672344 1 10.33604129 -11.45033991 0.171854494 7.26E-13 2.089095449 0.706140423 0.167159679 21.59982044 0.552485087 9.640452155 0.748950147 3.55E-12 11.45033991 2.089095449 SALSGHLETVILGLLK ddPTM_A459_MK2206_30min_R1 1 SALSGHLETVILGLLK 16 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YMW4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 127.79 0.0014162 667280 900.47 883.3 879.74 696.04 1069.6 790.16 930.48 947.41 728.84 581.27 FALSE TRUE 823.8802979 825.7970095 820.0256999 749.6491214 1026.995567 834.8981764 868.409377 939.1268943 804.6055262 653.282116 1.261140138 1.26407411 1.255239781 1.147512083 1.57205523 1.27800556 1.329302235 1.437551819 1.231635623 1 9.351562335 -8.542639477 21.88943443 0.999999995 1.317188113 0.435332947 0.109415135 741.0721987 820903.9109 0.106145509 0.027406653 2.87E-09 8.542639477 0.317188118 SALSLS(ph)KSPAK ddPTM_A459_MK2206_30min_R1 1 SALSLSKSPAK 11 1 Q99666;O14715;J3KQ37 Q99666 RGPD5;RGPD8 RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 SALS(0.008)LS(0.603)KS(0.39)PAK 137.81 0.0061842 14137000 2921.9 3421.8 3785.9 3459.6 2894.7 2481.2 2617.6 2660.5 1994.7 1195 TRUE FALSE 2673.377061 3199.040198 3528.923656 3726.058991 2779.397969 2621.6834 2442.98468 2637.239529 2202.056203 1343.045622 1.990533321 2.381929658 2.627553077 2.774335384 2.069473981 1.952043443 1.818988604 1.963626169 1.639598959 1 10.3912926 -8.218440696 0.448046792 0.982385183 2.459980391 0.751307475 0.239461211 0.542782688 0.295064986 0.317242508 0.192219476 6.05E-09 8.218440696 1.477595208 SALSPSKS(ph)PAK ddPTM_A459_MK2206_30min_R1 1 SALSPSKSPAK 11 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 SALSPSKS(1)PAK 115.12 0.029767 45347000 2180.7 2376.3 2442.6 2082.8 1889.7 1651.2 1853.4 2181.8 1855.6 1726 TRUE FALSE 1995.220014 2221.602438 2276.803117 2243.217617 1814.429247 1744.689517 1729.763068 2162.724753 2048.49626 1939.829911 1.028554103 1.145256306 1.17371276 1.156399128 0.935354815 0.899403348 0.891708628 1.114904323 1.056018494 1 10.92171444 -6.257055953 24.9860775 0.979909255 1.130766859 0.476484208 0.073365069 353.6195554 2015673.831 0.02433831 0.030333741 5.53E-07 6.257055953 0.150857605 SALSS(ph)SLRDLSEAGVHH ddPTM_A459_MK2206_30min_R1 2 SALSSSLRDLSEAGVHH 17 1 A0A0C4DGT3 A0A0C4DGT3 IQSEC1 1 S(0.024)ALS(0.081)S(0.446)S(0.446)LRDLS(0.002)EAGVHH;S(0.029)ALS(0.28)S(0.345)S(0.345)LRDLS(0.001)EAGVHH 66.568 0.022466 23081000 5824.9 4516 5561 4426.9 7654 6983 6305.7 6399 3204.2 2722 TRUE FALSE 5329.461667 4222.007579 5183.534814 4767.860605 7349.124972 7378.371425 5885.058258 6343.054218 3537.288056 3059.22191 1.742097116 1.380091966 1.694396473 1.558520678 2.402285675 2.411845771 1.92371081 2.07342076 1.156270503 1 11.57894905 -8.339063887 5.138832005 1.028678181 1.89714445 0.517578199 0.317339999 0.206360751 9.373505392 0.342876153 0.090285876 4.58E-09 8.339063887 0.868466269 SALSS(ph)SLRDLSEAGVHH ddPTM_A459_MK2206_30min_R2 1 SALSSSLRDLSEAGVHH 17 1 A0A0C4DGT3 A0A0C4DGT3 IQSEC1 1 S(0.003)ALS(0.116)S(0.437)S(0.437)LRDLS(0.007)EAGVHH 51.092 0.042399 17231000 7732.7 26517 18488 30013 26962 33496 25409 14667 32817 16972 TRUE FALSE 8324.721457 25200.20434 19104.38069 27560.84189 25903.33641 34770.71375 22072.76778 16584.02726 35671.36334 16418.20503 0.507042118 1.534893997 1.163609582 1.678675704 1.577720363 2.117814565 1.344408097 1.0100999 2.172671329 1 14.00300879 -4.76098277 24.87471366 1.521625342 0.507040929 0.376544224 0.387378695 10.83446047 589553.973 0.093235515 0.53327987 1.73E-05 4.76098277 -1.014584413 SALSSS(ph)LR ddPTM_A459_MK2206_30min_R1 3 SALSSSLR 8 0 A0A0C4DGT3;A0A3B3IU98;A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2 A0A0C4DGT3;A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 SALS(0.016)S(0.09)S(0.893)LR;SALS(0.018)S(0.1)S(0.881)LR;SALS(0.003)S(0.092)S(0.905)LR 93.649 0.023767 66845000 21521.2 22007.1 21692.6 16320.8 21210.2 20588.8 25417.7 18918.7 24426 28046.9 TRUE FALSE 19690.70893 20574.43379 20220.16675 17577.83084 20365.35282 21754.52006 23722.13161 18753.2958 26965.17011 31521.56172 0.624674282 0.652709849 0.641470969 0.557644669 0.646076898 0.69014728 0.752568411 0.594935491 0.855451591 1 14.94405139 -8.719096482 0.721895225 1.007192387 0.630647097 0.793238434 0.057973062 0.422838082 0.462794442 0.058099255 0.021594567 1.91E-09 8.719096482 -0.37654529 SALSSS(ph)LR ddPTM_A459_MK2206_30min_R2 1 SALSSSLR 8 0 A0A0C4DGT3;A0A3B3IU98;A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2 A0A0C4DGT3;A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 SALS(0.005)S(0.091)S(0.904)LR 93.598 0.023839 29402000 150560 143100 131960 161280 130910 123620 166600 134410 128330 149460 TRUE FALSE 162086.9894 135993.8621 136359.4805 148102.9081 125769.8156 128324.4457 144725.2199 151977.8485 139491.9114 144583.1324 1.121064308 0.94059286 0.943121637 1.024344303 0.869878896 0.887547832 1.000982739 1.051145081 0.964786895 1 17.14153973 -10.28376873 11.47523899 0.999986846 0.974353147 0.005787831 0.071614333 0 0 0.070820569 0.017176511 5.20E-11 10.28376873 -0.025633699 SALVTSSSS(ph)LPSFPSTLSWSR ddPTM_A459_MK2206_30min_R1 1 SALVTSSSSLPSFPSTLSWSR 21 0 F8VXI9;Q14161-6;Q14161-4;Q14161-3;Q14161 F8VXI9 GIT2 ARF GTPase-activating protein GIT2 1 SALVTSSS(0.018)S(0.982)LPSFPSTLSWSR 276.38 2.80E-61 12950000 2047.2 2372 2822 2318 2934.3 2808.4 3033.8 2655.3 2511.9 2356.2 TRUE FALSE 1873.07489 2217.582369 2630.450503 2496.532762 2817.420618 2967.409181 2831.420737 2632.084992 2773.020994 2648.103844 0.707326827 0.837422737 0.993333592 0.94276241 1.063938872 1.120578858 1.069225719 0.993950822 1.0471723 1 11.37074398 -4.76331599 0.916663084 1.049089198 0.500824692 0.863874878 0.043036323 0.791415001 0.508581945 0.015971344 0.439910418 1.72E-05 4.76331599 -0.548264506 SALVTSSSS(ph)LPSFPSTLSWSR ddPTM_A459_MK2206_30min_R2 2 SALVTSSSSLPSFPSTLSWSR 21 0 F8VXI9;Q14161-6;Q14161-4;Q14161-3;Q14161 F8VXI9 GIT2 ARF GTPase-activating protein GIT2 1 SALVTSSS(0.002)S(0.998)LPSFPSTLSWSR;SALVTSSS(0.003)S(0.996)LPSFPSTLSWSR 336.47 9.89E-157 11308100 41294 49921 44076 50391 51719 54208 64041 43743 45546 43924 TRUE FALSE 44455.50039 47441.99573 45545.47184 46273.89411 49688.25219 56270.92343 55632.33977 49460.36029 49507.50875 42490.76348 1.046239153 1.116524907 1.071891115 1.089034188 1.169389489 1.32430954 1.309280776 1.164026161 1.165135778 1 15.37486165 -6.355418756 3.872708868 1.212933952 1.082377809 0.256528329 0.0864683 0.285711118 7.844081549 0.02766978 0.031905392 4.41E-07 6.355418756 -0.130556143 SAMDSPVPASMFAPEPS(ph)SPGAAR ddPTM_A459_MK2206_30min_R1 1 SAMDSPVPASMFAPEPSSPGAAR 23 0 F8WAZ4;O00178 F8WAZ4 GTPBP1 GTP-binding protein 1 1 SAMDSPVPASMFAPEPS(0.637)S(0.363)PGAAR 161.63 5.46E-10 4708500 2716.4 2398.1 2390.7 2134.9 2863.5 2641.2 2431 2027.4 1978.2 1900.4 TRUE FALSE 2485.355916 2241.983254 2228.425945 2299.330368 2749.440731 2790.742462 2268.832426 2009.674656 2183.840969 2135.835899 1.163645539 1.049698273 1.04335073 1.076548235 1.287290251 1.306627753 1.062269075 0.940931209 1.02247601 1 11.06058509 -7.519351049 23.16349249 0.989342081 1.150302776 0.43399158 0.085985985 64.06692803 420701.2064 0.045085891 0.026820316 3.02E-08 7.519351049 0.160960695 SAMDSPVPASMFAPEPS(ph)SPGAAR ddPTM_A459_MK2206_30min_R2 2 SAMDSPVPASMFAPEPSSPGAAR 23 0 F8WAZ4;O00178 F8WAZ4 GTPBP1 GTP-binding protein 1 1 SAMDSPVPASMFAPEPS(0.5)S(0.5)PGAAR;SAMDSPVPASMFAPEPS(0.606)S(0.394)PGAAR 211.11 1.73E-23 18089100 47738 59320 53992 68090 53169 61171 69578 50832 62338 56234 TRUE FALSE 51392.85798 56374.25506 55792.06633 62526.82919 51081.31791 63498.90527 60442.32502 57475.91693 67760.04656 54399.08919 0.944737472 1.036308804 1.025606626 1.149409487 0.939010536 1.167278832 1.111090754 1.056560281 1.245609946 1 15.73129488 -2.795998728 0.464093653 1.107869264 2.88E-11 0.237949742 0.082480289 39.59277281 1.475886886 0.048270055 35.53951858 0.001599563 2.795998728 -1.107869264 SAMDSPVPASMFAPEPSS(ph)PGAAR ddPTM_A459_MK2206_30min_R1 3 SAMDSPVPASMFAPEPSSPGAAR 23 0 F8WAZ4;O00178 F8WAZ4 GTPBP1 GTP-binding protein 1 1 SAMDSPVPASMFAPEPS(0.035)S(0.965)PGAAR;SAMDSPVPASMFAPEPS(0.08)S(0.92)PGAAR;SAMDSPVPASMFAPEPS(0.029)S(0.971)PGAAR 296.6 6.30E-94 24850400 11865.2 10828.5 11317 10230.3 12342.9 11675.2 11473.7 10828.2 9117.71 8715.3 TRUE FALSE 10856.00243 10123.56268 10548.83357 11018.23948 11851.25616 12336.23973 10708.31041 10733.53019 10065.52858 9795.017161 1.108318878 1.033542108 1.076959172 1.1248821 1.209927044 1.259440339 1.093240597 1.095815353 1.027617248 1 13.2578323 -8.191371189 1.887821612 1.002018833 1.131491101 0.367938778 0.060732159 0.435827021 2.792638934 0.064603892 0.019476486 6.44E-09 8.191371189 0.129472268 SAMDSPVPASMFAPEPSS(ph)PGAAR ddPTM_A459_MK2206_30min_R2 3 SAMDSPVPASMFAPEPSSPGAAR 23 0 F8WAZ4;O00178 F8WAZ4 GTPBP1 GTP-binding protein 1 1 SAMDSPVPAS(0.004)MFAPEPS(0.105)S(0.89)PGAAR;SAMDSPVPASMFAPEPS(0.284)S(0.716)PGAAR;SAMDSPVPASMFAPEPS(0.352)S(0.648)PGAAR 184.88 1.13E-17 17703800 75585 102739 77715 100697 87019 90009 94823 73806 85519 88295 TRUE FALSE 81371.84572 97637.13066 80305.97931 92469.73299 83602.19682 93434.35557 82372.6262 83452.69761 92957.28804 85413.94138 0.952676395 1.143105318 0.94019756 1.082607025 0.978788655 1.093900528 0.964393223 0.977038365 1.088315169 1 16.38218395 -7.294545011 24.99618996 1.00552324 1.032660276 0.030056733 0.0675871 2659.605605 2008104.719 0.026297467 0.017730394 5.08E-08 7.294545011 0.027137036 SAMPFT(ph)ASPASSTTAR ddPTM_A459_MK2206_30min_R2 1 SAMPFTASPASSTTAR 16 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 S(0.001)AMPFT(0.616)AS(0.383)PASSTTAR 195.6 2.96E-06 21462000 29485 28665 24662 32573 31548 35148 32092 26049 21358 33573 TRUE FALSE 31742.39427 27241.53778 25484.21877 29911.6817 30309.267 36485.58177 27878.28185 29453.69374 23215.68023 32477.51576 0.977365218 0.838781451 0.784672663 0.920996603 0.933238467 1.123410486 0.858387139 0.90689491 0.714823154 1 14.98715366 -4.15422081 5.798829595 0.899422026 11.69784814 0.046953668 0.107038916 9991.465896 1662.337602 0.027497743 1415077.814 7.01E-05 4.15422081 10.79842611 SAMPFTAS(ph)PASSTTAR ddPTM_A459_MK2206_30min_R1 5 SAMPFTASPASSTTAR 16 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 SAMPFT(0.21)AS(0.765)PAS(0.019)S(0.004)T(0.001)T(0.001)AR;SAMPFT(0.087)AS(0.756)PAS(0.156)S(0.001)TTAR;SAMPFT(0.004)AS(0.996)PASSTTAR;SAMPFT(0.394)AS(0.598)PASS(0.003)T(0.004)TAR;SAMPFT(0.052)AS(0.396)PAS(0.04)S(0.396)T(0.058)T(0.058)AR 270.99 1.58E-50 197297000 16055.4 14847.4 14051.7 11618.6 14369.5 12729.8 14563 13125.9 11747.6 11061.6 TRUE FALSE 14689.80392 13880.83156 13097.90975 12513.46659 13797.13239 13450.55028 13591.52884 13011.14164 12968.80506 12431.99452 1.181612805 1.116540998 1.053564634 1.006553419 1.109808436 1.081930197 1.093270176 1.046585214 1.04317976 1 13.60177015 -4.951995977 2.571465023 1.058847707 1.187222204 0.594604497 0.033234624 0.257430942 2.863584936 0.008961457 0.061694203 1.12E-05 4.951995977 0.128374497 SAMPFTAS(ph)PASSTTAR ddPTM_A459_MK2206_30min_R2 1 SAMPFTASPASSTTAR 16 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 SAMPFT(0.126)AS(0.873)PAS(0.001)STTAR 195.5 1.26E-06 16065000 30654 32761 32912 39367 43872 38337 42813 35336 36104 40584 TRUE FALSE 33000.89381 31134.13638 34009.26965 36150.59017 42149.36484 39795.9414 37191.60167 39954.53653 39244.26066 39259.7474 0.840578353 0.793029462 0.866263079 0.92080547 1.073602548 1.013657602 0.947321471 1.017697239 0.999605531 1 15.26076327 -5.86357554 2.461453764 1.006419231 0.822041384 0.845527239 0.033645414 0.103472419 1.2740321 0.01033932 0.017475673 1.37E-06 5.86357554 -0.184377847 SAMPFTASPAS(ph)STTAR ddPTM_A459_MK2206_30min_R1 1 SAMPFTASPASSTTAR 16 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 SAMPFT(0.013)AS(0.247)PAS(0.698)S(0.036)T(0.006)TAR 205.33 1.38E-07 54738000 3972.8 3521.4 3386.6 2933.7 3699.2 2808.2 3780.6 3411.1 2854.5 2360.1 TRUE FALSE 3634.892498 3292.15622 3156.727028 3159.654082 3551.853031 2967.197857 3528.403072 3381.277112 3151.23549 2652.487006 1.370371463 1.241158284 1.190100845 1.191204359 1.339065195 1.118647462 1.330224451 1.274757277 1.18803051 1 11.37312997 -8.654658408 3.466779032 1.000063256 1.252066866 0.527152065 0.073294537 0.503336159 11.63164813 0.068579213 0.018082094 2.21E-09 8.654658408 0.25200361 SAMPFTASPASS(ph)TTAR ddPTM_A459_MK2206_30min_R1 2 SAMPFTASPASSTTAR 16 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 S(0.03)AMPFT(0.058)AS(0.253)PAS(0.058)S(0.458)T(0.137)T(0.007)AR;S(0.005)AMPFT(0.227)AS(0.106)PAS(0.004)S(0.516)T(0.138)T(0.005)AR 101.35 0.020956 25816000 6053.6 5416.7 5197.6 3942.3 5194.6 3914.6 4959.1 4376.4 4461.3 4317.2 TRUE FALSE 5538.709531 5064.071845 4844.801393 4245.936629 4987.688082 4136.241269 4628.287487 4338.137596 4925.0681 4852.047329 1.141520096 1.043697949 0.998506623 0.875081453 1.027955365 0.852473397 0.953883417 0.894083941 1.015049476 1 12.24437791 -4.983164414 1.500275206 0.940956739 1.174436382 0.53119371 0.057183626 0.547676818 1.529683724 0.015522383 0.170909794 1.04E-05 4.983164414 0.233479643 SAMPFTASPASS(ph)TTAR ddPTM_A459_MK2206_30min_R2 2 SAMPFTASPASSTTAR 16 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 S(0.002)AMPFT(0.085)AS(0.124)PAS(0.004)S(0.783)T(0.002)TAR;S(0.001)AMPFT(0.008)AS(0.11)PAS(0.044)S(0.638)T(0.189)T(0.01)AR 141.89 0.0015015 37624000 69435 69007 59601 75348 65821 67321 79240 57162 64727 83547 TRUE FALSE 74750.99699 65580.21273 61588.06759 69191.82737 63236.53682 69882.94783 68835.69282 64633.26967 70356.83746 80820.86823 0.924897228 0.811426729 0.762031749 0.856113389 0.782428328 0.864664651 0.851706921 0.799710162 0.870528107 1 16.30244023 -8.62101876 5.096738578 0.999994061 0.829754769 0.56674322 0.044180598 0.581315235 29.39152673 0.041623242 0.01082028 2.39E-09 8.62101876 -0.170239292 SANGGSES(ph)DGEENIGWSTVNLDEEK ddPTM_A459_MK2206_30min_R1 1 SANGGSESDGEENIGWSTVNLDEEK 25 0 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 S(0.016)ANGGS(0.086)ES(0.898)DGEENIGWSTVNLDEEK 136.44 2.65E-08 3697000 633.88 797.72 805.12 575.75 717.54 572.25 834.22 627.9 767.77 541.5 TRUE FALSE 579.9651774 745.788283 750.4706976 620.0943648 688.9588624 604.6503005 778.5707059 622.4103365 847.582439 608.5851081 0.952973002 1.225446159 1.233140094 1.018911499 1.132066581 0.993534499 1.279312779 1.022717001 1.392709791 1 9.249315222 -7.264470993 24.98167231 1.175577965 1.10353545 0.074564938 0.136566954 841.8796759 6937342.312 0.052863213 0.037278486 5.44E-08 7.264470993 -0.072042516 SANPPHTIQASEEQS(ph)STPAPVKK ddPTM_A459_MK2206_30min_R2 1 SANPPHTIQASEEQSSTPAPVKK 23 1 E9PS53;E9PHZ9;B7Z524;H0YDX7;J3QT46;Q9Y450-4;Q9Y450 E9PS53 HBS1L HBS1-like protein 1 SANPPHT(0.001)IQAS(0.081)EEQS(0.515)S(0.202)T(0.202)PAPVKK 48.832 0.037747 5978800 20905 27940 24652 33106 31923 32228 30625 23997 25782 28620 TRUE FALSE 22505.50287 26552.54023 25473.88538 30401.1339 30669.54262 33454.45912 26603.90071 27133.49029 28024.47176 27686.13174 0.812880004 0.959055619 0.920095505 1.098063615 1.107758314 1.208347177 0.960910717 0.980039052 1.012220559 1 14.75687588 -5.139301789 1.361812342 1.053295729 0.812204515 0.45911067 0.076936554 0.709772325 1.82229311 0.025380656 0.197368147 7.26E-06 5.139301789 -0.241091214 SANPPHTIQASEEQSST(ph)PAPVKK ddPTM_A459_MK2206_30min_R2 1 SANPPHTIQASEEQSSTPAPVKK 23 1 E9PS53;E9PHZ9;B7Z524;H0YDX7;J3QT46;Q9Y450-4;Q9Y450 E9PS53 HBS1L HBS1-like protein 1 SANPPHTIQAS(0.003)EEQS(0.118)S(0.419)T(0.46)PAPVKK 54.465 0.011619 5591400 26209 32514 27827 38425 38195 30693 33533 25580 32077 29604 TRUE FALSE 28215.58119 30899.40204 28754.73829 35285.55458 36695.27239 31861.04362 29130.07682 28923.39383 34866.99948 28638.0239 0.985248887 1.078964182 1.004075504 1.232122534 1.281347921 1.11254337 1.017181804 1.009964721 1.217507171 1 14.80564433 -5.720048284 24.99913276 1.126376934 1.028382881 0.193016331 0.094947697 280.5437722 169439.0176 0.027708078 0.047991159 1.91E-06 5.720048284 -0.097994053 SANPTRPS(ph)SPVTSHISK ddPTM_A459_MK2206_30min_R1 1 SANPTRPSSPVTSHISK 17 1 Q92560;F8W6N3;H0Y8E8 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 SANPT(0.001)RPS(0.412)S(0.07)PVT(0.143)S(0.206)HIS(0.168)K 66.448 0.022617 17481000 2269.1 1416.9 1614.7 749.34 3094.3 3545.7 3910.3 2987.7 1513.6 1742 TRUE FALSE 2076.101129 1324.659552 1505.098663 807.0542966 2971.047479 3746.45447 3649.451022 2961.578854 1670.944136 1957.812111 1.060418984 0.676601981 0.768765631 0.412222548 1.517534528 1.913592447 1.864045585 1.512698198 0.853475227 1 10.9350266 -6.276601579 24.13157514 1.513718801 0.728528235 0.499408769 0.345975176 403.3580474 641967.5384 0.110984351 0.126375817 5.29E-07 6.276601579 -0.785190566 SANPTRPS(ph)SPVTSHISK ddPTM_A459_MK2206_30min_R2 2 SANPTRPSSPVTSHISK 17 1 Q92560;F8W6N3;H0Y8E8 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 S(0.01)ANPT(0.164)RPS(0.462)S(0.09)PVT(0.159)S(0.077)HIS(0.037)K;SANPT(0.003)RPS(0.602)S(0.322)PVT(0.043)S(0.023)HIS(0.008)K 54.764 0.044547 24906000 6172.9 20118.1 13162.4 28665 33439 48339 34765 21784 36974 18945.8 TRUE FALSE 6645.50197 19119.06441 13601.22785 26322.97781 32126.01684 50178.57452 30200.31374 24631.2436 40189.93169 18327.6001 0.362595317 1.043184285 0.742117232 1.436247936 1.752876354 2.737869347 1.647805145 1.343942658 2.192863849 1 14.16173026 -5.908664282 2.409058804 1.834833114 0.721776362 0.508638969 0.464893385 0.236240772 2.781954832 0.142357905 0.23348178 1.23E-06 5.908664282 -1.113056752 SANT(ph)SPESSSR ddPTM_A459_MK2206_30min_R1 1 SANTSPESSSR 11 0 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 SANT(0.584)S(0.416)PESSSR 116.71 0.013583 1516200 1910.5 1416.3 825.67 1069.8 942.57 860.95 1663.8 1623.5 241.78 1166.5 TRUE FALSE 1748.001943 1324.098613 769.6258208 1152.196181 905.025441 909.696245 1552.810938 1609.305911 266.9138962 1311.014827 1.333319736 1.009979892 0.587045856 0.878858239 0.690324337 0.693887076 1.184434307 1.227526858 0.203593347 1 10.35646829 -4.883445419 3.582584976 0.822416745 1.343169247 0.243015802 0.283828527 0.367946521 8.065669684 0.071305112 0.433381599 1.31E-05 4.883445419 0.520752502 SANT(ph)SPESSSR ddPTM_A459_MK2206_30min_R2 1 SANTSPESSSR 11 0 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 SANT(0.89)S(0.107)PES(0.003)SSR 107.53 0.02454 665890 4369.2 3750.9 3526.8 5495.1 4114.7 4917.3 4105.3 7125.2 6224.6 6001 TRUE FALSE 4703.709311 3564.63576 3644.381752 5046.132752 3953.136203 5104.431297 3566.269179 8056.488104 6766.004456 5805.187861 0.81025962 0.614043136 0.627780158 0.869245384 0.680966111 0.879287875 0.614324508 1.387808336 1.165509992 1 12.50312704 -7.756655514 24.99999727 1.207494402 0.729193937 0.725292366 0.128494998 54.37519711 284163.9085 0.059847576 0.033114993 1.75E-08 7.756655514 -0.478300465 SANTS(ph)PESSSR ddPTM_A459_MK2206_30min_R2 2 SANTSPESSSR 11 0 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 SANT(0.086)S(0.914)PESSSR;SANT(0.073)S(0.927)PESSSR 101.38 0.015331 70128000 87947 71519 77610 93433 81924 79651 98516 109633 98816 109656 TRUE FALSE 94680.28994 67967.47046 80197.47866 85799.22502 78707.25212 82682.17462 85580.73086 123962.4095 107410.8371 106077.9337 0.892554056 0.640731471 0.756024141 0.808831979 0.741975728 0.779447447 0.806772228 1.168597513 1.012565322 1 16.69476505 -7.675374017 6.204462615 1.06653916 0.766860878 0.76418716 0.072666178 0.087622707 5.03583223 0.033295313 0.018856797 2.11E-08 7.675374017 -0.299678282 SAPAMQSSGS(ph)FNYARPK ddPTM_A459_MK2206_30min_R2 1 SAPAMQSSGSFNYARPK 17 1 Q8WX93;Q8WX93-3;Q8WX93-4;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 SAPAMQS(0.031)S(0.333)GS(0.636)FNYARPK 65.598 0.023688 16374000 21125 35047 33634 31688 37974 29837 45181 26107 27699 36144 TRUE FALSE 22742.34624 33306.61694 34755.34077 29098.98904 36482.94996 30972.46794 39248.68043 29519.27454 30108.20895 34964.62424 0.650438743 0.952580434 0.994014423 0.832240863 1.043424626 0.885822989 1.122525446 0.844261169 0.861104891 1 15.09360838 -4.760876955 24.73084357 0.94781921 0.650438352 0.499793545 0.089435841 9.770554745 429195.6113 0.021349112 0.123039648 1.73E-05 4.760876955 -0.297380858 SAPAS(ph)PTHPGLMSPR ddPTM_A459_MK2206_30min_R1 3 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 S(0.013)APAS(0.986)PT(0.001)HPGLMSPR;S(0.086)APAS(0.91)PT(0.005)HPGLMSPR;SAPAS(0.999)PT(0.001)HPGLMSPR 252.46 3.13E-28 44675100 4099 3538.52 3647.68 3078.59 4329.51 4619.99 5803.9 5182.9 4356.68 4130.46 TRUE FALSE 3750.358525 3308.161705 3400.085645 3315.703535 4157.056449 4881.569841 5416.732421 5137.586452 4809.572477 4642.172568 0.807888649 0.712632212 0.732434134 0.714256846 0.895498043 1.051570093 1.166852878 1.106720264 1.036060682 1 12.18058444 -6.585748545 2.452440175 1.088688573 0.7393083 0.908425417 0.049410889 0.077123288 0.941185969 0.017969041 0.018510465 2.60E-07 6.585748545 -0.349380273 SAPAS(ph)PTHPGLMSPR ddPTM_A459_MK2206_30min_R2 3 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 S(0.002)APAS(0.941)PT(0.058)HPGLMSPR;S(0.001)APAS(0.993)PT(0.006)HPGLMSPR;S(0.002)APAS(0.945)PT(0.054)HPGLMSPR 101.92 0.0043853 66984000 56977 105871 81314 116080 100373 129149 158665 123869 180921 153573 TRUE FALSE 61339.20293 100613.6001 84024.96818 106595.8927 96431.85169 134063.8557 137832.0949 140059.1036 196657.1815 148561.9256 0.412886429 0.677250242 0.565588847 0.717518249 0.649102058 0.902410595 0.927775366 0.942765807 1.323738776 1 17.18070489 -6.985178817 0.722215866 1.132230935 0.54743813 0.782788616 0.115063674 0.308247381 0.338245274 0.085979311 0.069350827 1.03E-07 6.985178817 -0.584792805 SAPAS(ph)PVQSPAK ddPTM_A459_MK2206_30min_R1 2 SAPASPVQSPAK 12 0 P35612 P35612 ADD2 Beta-adducin 1 S(0.007)APAS(0.946)PVQS(0.047)PAK;S(0.003)APAS(0.992)PVQS(0.005)PAK 175.6 0.00010345 12097400 4789.5 4932.5 5046.8 4820 4804.7 4483.1 5255 4960.3 5157.4 4013.1 TRUE FALSE 4382.127874 4611.393353 4704.237277 5191.237235 4613.318625 4736.929248 4904.448538 4916.93262 5693.530186 4510.273125 0.971588139 1.022419979 1.043004968 1.150980681 1.022846842 1.050253303 1.087395021 1.090162942 1.262347097 1 12.13899909 -2.659652406 0.467060439 1.103996702 4.42E-16 0.243604815 0.06982375 45.89846605 1.524060039 0.042213495 42.3708988 0.002189513 2.659652406 -1.103996702 SAPAS(ph)PVQSPAK ddPTM_A459_MK2206_30min_R2 3 SAPASPVQSPAK 12 0 P35612 P35612 ADD2 Beta-adducin 1 SAPAS(0.999)PVQS(0.001)PAK;SAPAS(0.955)PVQS(0.045)PAK;SAPAS(0.967)PVQS(0.033)PAK 186.29 0.00010945 72413000 72360 96256 89951 85805 80771 78639 100727 76777 96156 88595 TRUE FALSE 77899.93724 91476.06701 92949.92144 78794.45702 77599.5247 81631.66225 87501.42391 86812.01751 104519.4751 85704.15241 0.908940058 1.067346966 1.084543967 0.919377356 0.90543483 0.952481997 1.020970647 1.012926621 1.219538052 1 16.38707748 -8.047179617 11.10493994 1.112084029 0.983565019 0.305426348 0.077125968 1.204653529 279.926817 0.052442052 0.019923517 8.97E-09 8.047179617 -0.12851901 SAPGST(ph)PVRR ddPTM_A459_MK2206_30min_R2 1 SAPGSTPVRR 10 1 F5H1D6;Q07864;A0A087WW42;A0A087WX51 F5H1D6 POLE DNA polymerase;DNA polymerase epsilon catalytic subunit A 1 SAPGS(0.031)T(0.969)PVRR 86.114 0.044323 4901300 8448.4 12450 10476 12596 11542 14235 12557 8278.8 12005 10307 TRUE FALSE 9095.216 11831.7511 10825.26461 11566.86651 11088.80309 14776.7229 10908.25082 9360.867585 13049.1732 9970.683434 0.912195845 1.186653972 1.085709388 1.160087629 1.112140723 1.482017055 1.094032409 0.938839112 1.308754138 1 13.28347668 -1.940062049 19.76955293 1.13613252 0.15998348 0 0.162805253 0 0 0.036525883 0 0.011479896 1.940062049 -0.97614904 SAPS(ph)PTSNSTYLTMNAASR ddPTM_A459_MK2206_30min_R2 1 SAPSPTSNSTYLTMNAASR 19 0 Q96JM2;Q96JM2-3 Q96JM2 ZNF462 Zinc finger protein 462 1 S(0.001)APS(0.88)PT(0.101)S(0.017)NS(0.001)T(0.001)YLTMNAASR 135.43 0.00018955 3424300 4024.3 4913.9 3245 5770.1 4658.8 3733.5 4720.7 3396.8 4627.9 4217.3 TRUE FALSE 4332.403502 4669.882871 3353.18668 5298.664372 4475.872103 3875.580959 4100.866419 3840.773423 5030.426377 4079.689846 1.06194433 1.14466615 0.821921961 1.29879098 1.097110877 0.949969509 1.005190731 0.941437601 1.233041375 1 11.99424376 -6.70619964 24.99474304 1.020970689 1.085482449 0.046363456 0.132735114 308.5262906 139599.3403 0.043174513 0.043174489 1.97E-07 6.70619964 0.06451176 SAPS(ph)SPAPR ddPTM_A459_MK2206_30min_R1 2 SAPSSPAPR 9 0 E9PAK5;O75064 E9PAK5 DENND4B DENN domain-containing protein 4B 1 S(0.001)APS(0.499)S(0.499)PAPR;S(0.001)APS(0.499)S(0.499)PAPR 109.83 0.011204 19998500 10957 10431.5 9878.5 8471 10036.9 9123.3 12630.9 12219.1 3873.4 8619.9 TRUE FALSE 10025.04961 9752.407454 9207.974943 9123.437888 9637.10902 9639.853362 11788.31571 12112.2697 4276.053791 9687.798289 1.034811968 1.006669128 0.950471373 0.941745236 0.99476772 0.995050999 1.216820928 1.250260311 0.44138551 1 13.24195311 -8.253576878 24.99985898 0.720692744 1.042577274 0.403640949 0.159393555 526.7349257 1674836.581 0.110436392 0.040059607 5.58E-09 8.253576878 0.32188453 SAPSPT(ph)SNSTYLTMNAASR ddPTM_A459_MK2206_30min_R1 1 SAPSPTSNSTYLTMNAASR 19 0 Q96JM2;Q96JM2-3 Q96JM2 ZNF462 Zinc finger protein 462 1 S(0.001)APS(0.13)PT(0.635)S(0.206)NS(0.006)T(0.006)Y(0.001)LT(0.008)MNAAS(0.008)R 81.643 0.013112 3176700 578.06 777.15 716.58 663.87 840.08 539.81 634.91 583.63 487.16 412.03 TRUE FALSE 528.8929615 726.5573937 667.9405461 715.0013824 806.6178347 570.3735757 592.5563124 578.5273844 537.8020253 463.0753871 1.142131446 1.568982965 1.442401313 1.54402804 1.741871534 1.23170782 1.279610899 1.249315771 1.161370352 1 8.855103268 -7.779863731 0.900481251 1.046477457 1.478436054 0.472677437 0.158457626 0.51841212 0.771257866 0.145016252 0.061063831 1.66E-08 7.779863731 0.431958597 SAPT(ph)APTPPPPPPPATPR ddPTM_A459_MK2206_30min_R2 1 SAPTAPTPPPPPPPATPR 18 0 A6NHN7;A6NHB5;Q14202-2;Q14202 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 S(0.206)APT(0.654)APT(0.141)PPPPPPPATPR 145.79 0.00060946 11274000 16010 21969 19470 21639 17560 19477 22801 19281 16749 19930 TRUE FALSE 17235.73791 20878.05141 20119.12008 19871.02448 16870.50617 20218.21088 19807.20131 21801.0929 18205.79774 19279.68573 0.893984381 1.082904135 1.043539836 1.030671597 0.875040517 1.048679484 1.027361213 1.130780512 0.944299508 1 14.23479391 SAPT(ph)SPTATNISSK ddPTM_A459_MK2206_30min_R2 2 SAPTSPTATNISSK 14 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 SAPT(0.976)S(0.024)PTATNISSK;SAPT(0.957)S(0.042)PT(0.001)ATNISSK 139.77 0.0013281 31893000 213564 239977 212993 225589 182550 176835 233956 203203 209438 206911 TRUE FALSE 229914.624 228060.0911 220094.0803 207157.6571 175382.1698 183564.5798 203237.2962 229762.3298 227654.5387 200159.511 1.148657003 1.139391728 1.099593415 1.034962846 0.876212021 0.917091468 1.015376662 1.147896139 1.137365582 1 17.61079064 -5.664614344 3.001586995 1.013599647 1.140024234 0.304244085 0.078763372 0.362647225 6.518765754 0.026215327 0.049489313 2.16E-06 5.664614344 0.126424587 SAPTAPT(ph)PPPPPPPATPR ddPTM_A459_MK2206_30min_R1 1 SAPTAPTPPPPPPPATPR 18 0 A6NHN7;A6NHB5;Q14202-2;Q14202 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 S(0.032)APT(0.338)APT(0.63)PPPPPPPATPR 98.572 0.007576 8808300 2962.4 2994.4 2865.3 2444.6 3295.2 2862.1 2874 2792.4 2761.1 3028.2 TRUE FALSE 2710.432324 2799.464016 2670.811419 2632.883516 3163.945206 3024.149629 2682.280704 2767.986341 3048.126226 3403.356278 0.796399819 0.822559787 0.784758104 0.773613839 0.92965442 0.888578621 0.788128096 0.813310778 0.895623607 1 11.73274247 -14.52287875 0.165141731 1.646593438 0.789273098 0.563571184 0.047317144 110.1024286 1.022897417 23.257436 0.200958877 3.00E-15 14.52287875 -0.85732034 SAPTAPT(ph)PPPPPPPATPR ddPTM_A459_MK2206_30min_R2 1 SAPTAPTPPPPPPPATPR 18 0 A6NHN7;A6NHB5;Q14202-2;Q14202 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 SAPT(0.031)APT(0.969)PPPPPPPATPR 140.96 0.00073374 12669000 20235 25369 18336 30595 20984 23895 30542 19368 21763 24491 TRUE FALSE 21784.20716 24109.21235 18947.31309 28095.29063 20160.06272 24804.34097 26531.79871 21899.4641 23655.9064 23691.86068 0.919480638 1.017615825 0.799739343 1.185862563 0.850927793 1.046956223 1.119869776 0.92434547 0.998482421 1 14.53210389 -5.740188816 24.99994291 1.013393107 0.922812463 0.185455599 0.100539298 467.7308538 550251.4651 0.026199963 0.045323617 1.82E-06 5.740188816 -0.090580644 SAPTS(ph)PTATNISSK ddPTM_A459_MK2206_30min_R1 3 SAPTSPTATNISSK 14 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 SAPT(0.021)S(0.966)PT(0.013)ATNISSK;SAPT(0.135)S(0.857)PT(0.008)ATNISSK;SAPT(0.166)S(0.832)PT(0.002)ATNISSK 171.36 0.00014246 21770700 10264.2 10385 8809.6 8049.8 9174.2 8233.9 9452 8241 8295.1 7987.3 TRUE FALSE 9391.175891 9708.934612 8211.628897 8669.796991 8808.772187 8700.096302 8821.474326 8168.949806 9157.405329 8976.827025 1.046157608 1.081555274 0.914758508 0.965797488 0.981279038 0.969172769 0.98269403 0.910004145 1.02011605 1 13.13198988 -5.249165836 24.98413561 0.965729055 1.063856453 0.571367191 0.033171799 488.6193752 994633.8856 0.007939501 0.020675919 5.63E-06 5.249165836 0.098127398 SAPYQWPS(ph)PEAGIELMR ddPTM_A459_MK2206_30min_R1 1 SAPYQWPSPEAGIELMR 17 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4;F6QUH3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 S(0.01)APY(0.017)QWPS(0.972)PEAGIELMR 69.111 0.035028 3367500 898.93 813.08 867.08 644.69 752.43 827.43 846.79 900.72 570.43 498.4 TRUE FALSE 822.471283 760.1483442 808.2250254 694.3441355 722.4591198 874.2783715 790.3021842 892.8451 629.7282398 560.1455547 1.468317076 1.357055033 1.442883941 1.239578052 1.289770335 1.560805694 1.410887184 1.593951951 1.124222507 1 9.129657952 -8.451064064 5.399670114 1.001577084 1.412083488 0.663297257 0.10373783 0.116961216 5.844647557 0.103025335 0.026763211 3.54E-09 8.451064064 0.410506404 SAQEIDEMNEIYDENSYWRNQNPGRYRK ddPTM_A459_MK2206_30min_R2 1 SAQEIDEMNEIYDENSYWRNQNPGRYRK 28 3 F5H5S8 F5H5S8 ACRBP 0 40.404 0.041963 5491900 1119.7 13377 5565.1 17305 18114 17077 8395.9 8287.7 14940 5904 FALSE TRUE 1205.425093 12712.71763 5750.637656 15891.12614 17402.75334 17726.8772 7293.508245 9370.930846 16239.45419 5711.352964 0.211057713 2.225867971 1.006878351 2.782375077 3.047045675 3.103796476 1.277019349 1.640754985 2.843363788 1 12.47961683 -4.759970574 24.75083605 2.144974335 0.211055011 0.339113638 0.790408501 39.32372802 662383.2017 0.201541431 1.231936036 1.74E-05 4.759970574 -1.933919324 SAQGSS(ph)SPVPSMVQK ddPTM_A459_MK2206_30min_R1 2 SAQGSSSPVPSMVQK 15 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SAQGS(0.081)S(0.839)S(0.081)PVPSMVQK;SAQGSS(0.667)S(0.331)PVPS(0.002)MVQK 192.54 3.00E-05 49735000 22968.2 21329.3 24032.4 18317.6 22237.4 19065.7 24136.7 21771.4 22092.8 21337.3 TRUE FALSE 21014.63398 19940.75869 22401.14765 19728.42473 21351.63727 20145.18346 22526.58478 21581.05495 24389.42562 23980.72581 0.876313509 0.831532742 0.934131345 0.822678383 0.890366598 0.840057287 0.939362093 0.899933351 1.017042846 1 14.5495877 -7.997808748 1.249251702 1.010743644 0.8677091 0.657865824 0.037481774 0.260724691 0.735200086 0.031405733 0.010834346 1.01E-08 7.997808748 -0.143034544 SAQGSS(ph)SPVPSMVQK ddPTM_A459_MK2206_30min_R2 3 SAQGSSSPVPSMVQK 15 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SAQGS(0.002)S(0.498)S(0.498)PVPS(0.002)MVQK;SAQGS(0.187)S(0.673)S(0.131)PVPS(0.009)MVQK;SAQGS(0.008)S(0.91)S(0.082)PVPSMVQK 236.03 1.65E-15 106643000 636650 630110 586170 685140 683370 638930 800530 592370 558670 771980 TRUE FALSE 685392.4135 598819.6537 605712.6152 629161.8703 656537.4601 663244.9289 695419.4494 669794.7929 607262.1068 746790.3558 0.917784232 0.801857776 0.811087892 0.842487942 0.879145606 0.888127335 0.931211074 0.896898022 0.81316276 1 19.51034377 -6.442795881 2.300050309 0.901137621 0.837566705 0.23957708 0.051955808 0.461022793 4.819060978 0.01787121 0.020235891 3.61E-07 6.442795881 -0.063570916 SAQGSSS(ph)PVPSMVQK ddPTM_A459_MK2206_30min_R1 2 SAQGSSSPVPSMVQK 15 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SAQGSS(0.086)S(0.9)PVPS(0.013)MVQK;SAQGS(0.006)S(0.006)S(0.984)PVPS(0.003)MVQK 127.07 0.0010882 14239800 5367.2 5546.5 5428.6 4395.6 5559.9 4184.2 5050.3 4368.4 4839.2 4661.7 TRUE FALSE 4910.691456 5185.421842 5060.121757 4734.149874 5338.43741 4421.105788 4713.403702 4330.207539 5342.252157 5239.22659 0.9372932 0.989730403 0.965814643 0.903597085 1.018936157 0.843847028 0.899637307 0.826497473 1.01966427 1 12.35513814 -6.758575078 24.99968816 0.905942069 0.961403134 0.098251118 0.063278281 143.0606995 1248638.356 0.020367947 0.019518162 1.74E-07 6.758575078 0.055461065 SAQGSSS(ph)PVPSMVQK ddPTM_A459_MK2206_30min_R2 5 SAQGSSSPVPSMVQK 15 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SAQGS(0.034)S(0.132)S(0.518)PVPS(0.315)MVQK;SAQGSS(0.096)S(0.558)PVPS(0.346)MVQK;SAQGSS(0.037)S(0.519)PVPS(0.444)MVQK;SAQGSS(0.002)S(0.861)PVPS(0.137)MVQK;SAQGS(0.001)S(0.058)S(0.933)PVPS(0.008)MVQK 128.74 0.0031105 60127700 327622 317936 287889 303162 316160 267570 378008 259311 239828 362662 TRUE FALSE 352704.9922 302147.7606 297487.0756 278392.6948 303745.9698 277752.5638 328375.0955 293203.838 260687.8059 350828.3686 1.005349122 0.861240959 0.847956158 0.793529599 0.865796489 0.791704972 0.935999266 0.835747232 0.743063644 1 18.42040589 -4.756692067 3.977247712 0.845555861 1.02422099 0.298680602 0.069755494 0.303338425 8.822477052 0.016448829 0.162865337 1.75E-05 4.756692067 0.178665128 SAQGSSSPVPS(ph)MVQK ddPTM_A459_MK2206_30min_R2 2 SAQGSSSPVPSMVQK 15 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SAQGSSS(0.008)PVPS(0.992)MVQK;SAQGS(0.003)S(0.025)S(0.452)PVPS(0.52)MVQK 101.3 0.026689 20398900 78835 72820 79533 77871 73210 64483 81071 61173 65274 84976 TRUE FALSE 84870.66821 69203.86469 82184.59052 71508.6902 70335.40755 66936.94575 70426.28032 69168.52114 70951.41453 82203.24008 1.032449185 0.84186298 0.999773129 0.869901115 0.855628166 0.814285978 0.856733631 0.841433027 0.863121873 1 16.32690764 -1.522878968 0.721505822 0.865978209 21.26936933 0.27570168 0.064646507 402.8487937 1.958013644 0.023865601 13305.96599 0.029999985 1.522878968 20.40339112 SAQGSSSPVPSMVQKS(ph)PR ddPTM_A459_MK2206_30min_R1 2 SAQGSSSPVPSMVQKSPR 18 1 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SAQGSSSPVPS(0.005)MVQKS(0.995)PR;SAQGSSSPVPS(0.002)MVQKS(0.998)PR 128.8 0.00036396 35458000 8471.3 8530 8029.7 8387.1 8849.7 7067.5 6853.9 7550.5 4739.6 3355.7 TRUE FALSE 7750.77145 7974.69545 7484.666336 9033.075895 8497.197709 7467.655742 6396.688837 7484.486775 5232.298381 3771.42945 2.055128315 2.114502089 1.984570157 2.395133202 2.253044322 1.980059773 1.696091342 1.984522546 1.38735152 1 11.88089572 -8.367437703 0.72939232 0.990267131 2.152459661 0.838455602 0.159394298 0.263528411 0.319152793 0.161330022 0.064538426 4.29E-09 8.367437703 1.16219253 up SAQGSSSPVPSMVQKS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SAQGSSSPVPSMVQKSPR 18 1 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SAQGSSSPVPS(0.042)MVQKS(0.958)PR 107.88 0.0008573 20849000 24262 61571 44725 54425 66331 50431 57710 29132 55693 44680 TRUE FALSE 26119.51737 58513.47367 46216.10918 49978.3034 63726.51165 52350.18704 50132.60768 32939.65243 60537.07647 43222.09526 0.604309375 1.353786144 1.069270448 1.156313758 1.474396631 1.211190405 1.15988379 0.762102166 1.400604855 1 15.39948139 -4.75016139 24.99303949 1.174868801 0.604308127 0.432364784 0.196641736 491.5905244 1089339.334 0.048521673 0.736761434 1.78E-05 4.75016139 -0.570560674 SAQQEASADVAT(ph)PK ddPTM_A459_MK2206_30min_R1 1 SAQQEASADVATPK 14 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 SAQQEASADVAT(1)PK 195.6 0.00029364 2995600 870.67 1047.3 943.12 612.89 601.75 663.84 709.33 927.95 701.5 633.51 TRUE FALSE 796.6149444 979.1205796 879.1036421 660.094894 577.7810233 701.4260471 662.0118899 919.837031 774.4234353 711.9940016 1.11885064 1.375180939 1.234706529 0.927107381 0.811497038 0.985157242 0.929799814 1.291916827 1.087682528 1 9.475721277 -5.708477469 7.693053116 1.005063114 1.258249876 0.407604087 0.131256397 0.247829735 30.66000649 0.03891503 0.067274111 1.96E-06 5.708477469 0.253186762 SAS(ph)ADNLTLPR ddPTM_A459_MK2206_30min_R2 1 SASADNLTLPR 11 0 Q8ND76-3;Q8ND76-2;Q8ND76 Q8ND76-3 CCNY Cyclin-Y 1 S(0.015)AS(0.985)ADNLTLPR 115.06 0.0062855 32219000 26875 26263 35404 30145 27899 31373 45193 15768 34940 31125 TRUE FALSE 28932.57066 24958.81761 36584.35169 27682.05707 26803.54508 32566.9215 39259.10481 17828.93174 37979.01804 30109.3938 0.960915084 0.828937898 1.215047767 0.919382743 0.890205404 1.081619966 1.303882273 0.592138515 1.261367741 1 14.87792604 -6.779304346 24.82980194 1.038315373 0.967046359 0.040761623 0.202851644 1086.417752 1509958.215 0.06977183 0.061661112 1.66E-07 6.779304346 -0.071269014 SAS(ph)AGPAGESKPK ddPTM_A459_MK2206_30min_R1 2 SASAGPAGESKPK 13 1 F5H5Z1;H0YGL7;F5H510;Q8N5U6;Q8N5U6-2 F5H5Z1 RNF10 RING finger protein 10 1 S(0.005)AS(0.995)AGPAGESKPK;S(0.005)AS(0.995)AGPAGESKPK 141.73 0.0010813 4026200 4677.92 4928.1 4529.92 3980.84 3620.98 2936.54 3727.5 3926.98 1714.27 3148.22 TRUE FALSE 4280.038339 4607.279794 4222.441651 4287.444987 3476.748699 3102.804357 3478.845276 3892.646828 1892.474501 3538.245261 1.209649988 1.302136922 1.193371669 1.211743299 0.982619474 0.876933092 0.983212022 1.100163087 0.534862442 1 11.78881834 -6.309556799 2.632315503 0.909969598 1.240002955 0.552434727 0.140968428 0.221375227 3.027475243 0.045437639 0.055445563 4.90E-07 6.309556799 0.330033357 SAS(ph)AGPAGESKPK ddPTM_A459_MK2206_30min_R2 2 SASAGPAGESKPK 13 1 F5H5Z1;H0YGL7;F5H510;Q8N5U6;Q8N5U6-2 F5H5Z1 RNF10 RING finger protein 10 1 S(0.022)AS(0.977)AGPAGESKPK;S(0.218)AS(0.782)AGPAGESKPK 67.846 0.037765 7518600 34340 38343 40460 40782 38884 26938.8 36208 30611 27042 39399 TRUE FALSE 36969.0968 36438.94238 41808.91621 37449.98014 37357.21878 27963.97491 31453.84611 34611.9628 29394.06428 38113.41386 0.969976002 0.956066085 1.096960675 0.98259317 0.980159346 0.733704281 0.825269713 0.908130742 0.771226225 1 15.21801122 -6.627157892 7.849554488 0.840848444 1.002014915 0.486747362 0.07680938 0.19373623 13.09360913 0.02462265 0.024598813 2.36E-07 6.627157892 0.161166471 SAS(ph)APTLAETEKETAEHLDLAGASSR ddPTM_A459_MK2206_30min_R1 2 SASAPTLAETEKETAEHLDLAGASSR 26 1 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.25)AS(0.685)APT(0.048)LAET(0.015)EKET(0.001)AEHLDLAGASSR;S(0.04)AS(0.92)APT(0.04)LAETEKETAEHLDLAGASSR 114.92 3.34E-09 11310900 2155.3 1969.69 1628.33 1225.76 1583.37 2047.71 2407.9 1398.81 2113.7 2770.8 TRUE FALSE 1971.980417 1841.462823 1517.803496 1320.168248 1520.30102 2163.649571 2247.273384 1386.580352 2333.426679 3114.067622 0.633249067 0.591336813 0.487402228 0.423936924 0.488204241 0.694798519 0.721652082 0.445263405 0.749317922 1 11.60458456 -9.486583518 0.464499097 1.05265991 0.537362346 0.627971106 0.102399473 2.811951698 0.792221575 0.380311477 0.060734353 3.26E-10 9.486583518 -0.515297564 SAS(ph)APTLAETEKETAEHLDLAGASSR ddPTM_A459_MK2206_30min_R2 1 SASAPTLAETEKETAEHLDLAGASSR 26 1 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.206)AS(0.747)APT(0.047)LAETEKETAEHLDLAGASSR 92.428 9.92E-06 3861400 16844 15064 11856 13884 11355 14908 15619 16727 10295 17426 TRUE FALSE 18133.58959 14315.94367 12251.27312 12749.63279 10909.14565 15475.33439 13568.20654 18913.27633 11190.44049 16857.39105 1.075705579 0.849238392 0.726759739 0.756323013 0.64714318 0.918014795 0.804881758 1.121957501 0.663829916 1 14.04109365 SAS(ph)APTLAETEKETAEHLDLAGASSRPK ddPTM_A459_MK2206_30min_R2 1 SASAPTLAETEKETAEHLDLAGASSRPK 28 2 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.284)AS(0.329)APT(0.329)LAET(0.029)EKET(0.029)AEHLDLAGASSRPK 43.303 0.025851 14023000 22230 49945 31680 29101 33721 26863 41007 39492 35315 35243 TRUE FALSE 23931.94589 47464.80393 32736.19539 26723.35521 32396.94411 27885.29029 35622.73164 44653.74 38386.63487 34093.0238 0.701960203 1.392214554 0.960202169 0.783836464 0.950251415 0.817917779 1.044868647 1.309761794 1.125938113 1 15.05718894 -7.526971854 24.613366 1.166173075 0.948684943 0.199735231 0.187577144 158.1948949 951252.9107 0.087600094 0.050864434 2.97E-08 7.526971854 -0.217488132 SAS(ph)ASHQADIK ddPTM_A459_MK2206_30min_R1 2 SASASHQADIK 11 0 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(0.001)AS(0.5)AS(0.5)HQADIK;SAS(0.5)AS(0.5)HQADIK 182.72 3.49E-05 30393500 8410.8 6497.6 3993.4 5356.9 6773.1 5805.7 7196.1 5517.8 1947.15 4703.1 TRUE FALSE 7695.417293 6074.605059 3722.339134 5769.489366 6503.313085 6134.413717 6716.061299 5469.558456 2149.56321 5285.755535 1.455878397 1.149240637 0.704220827 1.091516497 1.230346928 1.1605557 1.270596276 1.034773254 0.406670947 1 12.36789399 -8.059834044 8.556357092 0.706393132 1.13677366 0.386472025 0.222358604 0.407530159 54.45912522 0.150700629 0.057011529 8.71E-09 8.059834044 0.430380528 SAS(ph)ASPLTPCSVTR ddPTM_A459_MK2206_30min_R1 1 SASASPLTPCSVTR 14 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SAS(0.993)AS(0.003)PLT(0.003)PCSVTR 78.287 0.03841 3856200 3641.3 3752.6 4378.4 4284 3551.3 2907.7 3849.1 3332.4 4262.3 4880 TRUE FALSE 3331.588314 3508.305058 4081.206407 4613.954422 3409.844201 3072.331461 3592.333562 3303.265178 4705.381338 5484.571242 0.607447359 0.639668062 0.744124969 0.841260733 0.621715728 0.560177145 0.654988951 0.602283211 0.857930571 1 12.42116313 -8.477007609 3.701354321 0.998488081 0.663263671 0.681580809 0.076673115 0.12567095 3.778048495 0.081316542 0.021420862 3.33E-09 8.477007609 -0.33522441 SAS(ph)ASPLTPCSVTR ddPTM_A459_MK2206_30min_R2 1 SASASPLTPCSVTR 14 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 S(0.124)AS(0.873)AS(0.003)PLTPCSVTR 94.728 0.012996 5391500 10088 7626 8897.2 6819.3 9951.2 5612.8 8367.3 8657.1 6798.1 6611.7 TRUE FALSE 10860.34504 7247.303929 9193.828207 6262.141376 9560.465887 5826.399037 7268.663459 9788.612694 7389.38645 6395.96077 1.69800057 1.133106376 1.43744287 0.979077515 1.494766186 0.910949777 1.13644591 1.530436637 1.15532079 1 12.64294537 -4.755641759 24.97319931 1.213179899 1.698001363 0.337870233 0.209159463 217.756603 937888.8643 0.049307438 0.429125096 1.76E-05 4.755641759 0.484821464 SAS(ph)DTNLQK ddPTM_A459_MK2206_30min_R1 1 SASDTNLQK 9 0 A0A0C4DGH6;A0JNW5 A0A0C4DGH6 UHRF1BP1L UHRF1-binding protein 1-like 1 S(0.009)AS(0.959)DT(0.032)NLQK 88.338 0.031328 5130700 3377.6 2909.6 2670.8 2497.2 2019.9 1503.2 2899.7 2433.5 803.44 1567 TRUE FALSE 3090.317384 2720.184511 2489.513537 2689.534777 1939.443106 1588.309885 2706.266304 2412.224166 886.9604631 1761.13179 1.754733746 1.544566129 1.413587303 1.527162698 1.101248139 0.90186884 1.536663138 1.369701109 0.503630942 1 10.78228716 -1.522878749 0.210060542 0.905427403 5.223206127 0.471777331 0.262264487 50.04655883 0.623094743 0.456073466 72.19447775 0.03 1.522878749 4.317778724 SAS(ph)EPSLHR ddPTM_A459_MK2206_30min_R1 5 SASEPSLHR 9 0 H7C155;P04049;P04049-2;P10398;Q96II5 H7C155;P10398 RAF1;ARAF RAF proto-oncogene serine/threonine-protein kinase;Serine/threonine-protein kinase A-Raf 1 S(0.001)AS(0.999)EPS(0.001)LHR;S(0.02)AS(0.98)EPSLHR;S(0.009)AS(0.991)EPS(0.001)LHR;S(0.027)AS(0.973)EPSLHR;S(0.042)AS(0.958)EPSLHR 110.53 0.0071996 143029300 27718.9 29423.1 26863.6 24381.9 24148.4 22004.2 30002.8 29116 18346.4 23395.8 TRUE FALSE 25361.262 27507.65084 25040.17368 26259.79816 23186.51809 23250.05879 28001.36796 28861.44188 20253.57393 26294.24833 0.964517475 1.04614707 0.952306123 0.998689821 0.881809504 0.884226029 1.06492369 1.097633274 0.770266321 1 14.68245964 -5.294901035 24.16357529 0.959887375 1.005332333 0.042600546 0.091808128 1476.470339 1066197.593 0.024184068 0.050350145 5.07E-06 5.294901035 0.045444958 SAS(ph)EPSLHR ddPTM_A459_MK2206_30min_R2 4 SASEPSLHR 9 0 H7C155;P04049;P04049-2;P10398;Q96II5 H7C155;P10398 RAF1;ARAF RAF proto-oncogene serine/threonine-protein kinase;Serine/threonine-protein kinase A-Raf 1 S(0.022)AS(0.977)EPSLHR;S(0.024)AS(0.975)EPS(0.001)LHR;S(0.005)AS(0.961)EPS(0.034)LHR;S(0.004)AS(0.942)EPS(0.054)LHR 95.483 0.014774 198892000 121515 198122 155003 246361 238062 250316 229230 168089 214983 170746 TRUE FALSE 130818.2818 188283.5496 160170.7227 226232.5182 228714.4897 259841.9508 199131.8256 190058.8094 233681.8327 165174.572 0.792000126 1.139906387 0.969705692 1.369657057 1.384683411 1.573135305 1.205584027 1.150654166 1.414756702 1 17.33363208 -5.757468902 24.98950166 1.317061218 0.984474213 0.446249587 0.168679372 91.9975216 579005.9172 0.045982615 0.076016526 1.75E-06 5.757468902 -0.332587005 SAS(ph)EPSLNR ddPTM_A459_MK2206_30min_R1 2 SASEPSLNR 9 0 H7C560;A0A2R8Y8E0;A0A2U3TZI2;P15056 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(0.119)AS(0.683)EPS(0.198)LNR;S(0.041)AS(0.938)EPS(0.022)LNR 155.53 0.00082538 60470000 5047.2 3929.9 4324.7 4138.4 5073.8 4770.6 4536.1 4159.4 4391 3370.2 TRUE FALSE 4617.909136 3674.062796 4031.151413 4457.140285 4871.699802 5040.707249 4233.505046 4123.034804 4847.460163 3787.72582 1.219177247 0.96999175 1.064266952 1.176732556 1.286180688 1.330800456 1.117690468 1.088525147 1.279781165 1 11.88711619 -4.451479708 22.78655551 1.152802141 4.030751977 0.031328562 0.116679282 2839.587985 903671.5983 0.029728114 1186.676998 3.54E-05 4.451479708 2.877949836 SAS(ph)EPSLNR ddPTM_A459_MK2206_30min_R2 2 SASEPSLNR 9 0 H7C560;A0A2R8Y8E0;A0A2U3TZI2;P15056 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(0.001)AS(0.914)EPS(0.085)LNR;S(0.001)AS(0.653)EPS(0.346)LNR 141.91 0.0021656 66447000 132617 179100 135439 161812 144826 128371 183730 104985 128435 132791 TRUE FALSE 142770.2595 170206.1544 139954.4687 148591.442 139139.4035 133256.2484 159606.0303 118706.9 139606.0441 128458.0405 1.111415517 1.324994167 1.08949559 1.156731345 1.083150599 1.037352335 1.242475984 0.924090851 1.086783229 1 16.97093767 -6.068312914 0.294183347 0.995009047 1.277971639 0.277297613 0.092888536 4.656991517 0.603054584 0.118207462 0.455203407 8.54E-07 6.068312914 0.282962592 SAS(ph)FAFEFPK ddPTM_A459_MK2206_30min_R1 2 SASFAFEFPK 10 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 S(0.008)AS(0.992)FAFEFPK;S(0.209)AS(0.791)FAFEFPK 124.6 0.0037912 43265000 6386.7 5426.6 6534.2 5208.8 5869 4566 7103.1 5346.1 6690.9 6620.7 TRUE FALSE 5843.477627 5073.327354 6090.676709 5609.982679 5635.225302 4824.522974 6629.265159 5299.359611 7386.442999 7440.9223 0.785316308 0.681814317 0.818537873 0.753936468 0.757328873 0.648377013 0.89091982 0.712191231 0.992678421 1 12.86126574 -8.268617237 24.5581774 0.996339285 0.756539335 0.687378181 0.064818148 253.2889692 866582.7572 0.054750869 0.015350711 5.39E-09 8.268617237 -0.239799951 SAS(ph)FAFEFPK ddPTM_A459_MK2206_30min_R2 2 SASFAFEFPK 10 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 SAS(1)FAFEFPK;S(0.001)AS(0.999)FAFEFPK 155.97 0.00051655 24706000 109538 94272 98304 96090 90506 71076 109894 74536 66354 91028 TRUE FALSE 117924.3135 89590.58956 101581.4063 88239.13962 86952.27968 73780.84699 95464.78579 84278.11112 72125.35098 88057.76381 1.339169977 1.017407048 1.153576946 1.002059737 0.987445921 0.837868733 1.08411549 0.957077576 0.819068619 1 16.42616259 -1.522878746 0.522943644 0.94199597 14.17787829 0.6035957 0.089730602 83.20579133 0.828029331 0.046205149 1223.083234 0.03 1.522878746 13.23588232 SAS(ph)FAFEFPKDR ddPTM_A459_MK2206_30min_R2 2 SASFAFEFPKDR 12 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 S(0.186)AS(0.814)FAFEFPKDR;S(0.003)AS(0.997)FAFEFPKDR 94.45 0.023984 4839000 24630.1 57103 45602 47126 67206 49759 45126 28556 42283 37438 TRUE FALSE 26515.79939 54267.34806 47122.34792 43275.65505 64567.15476 51652.61361 39200.90199 32288.36725 45960.69891 36216.40113 0.732148932 1.498419124 1.301132814 1.194918703 1.78281532 1.426221601 1.082407439 0.891539917 1.269057595 1 15.14435557 -7.322894365 6.623782696 1.049066734 1.344493373 0.187882508 0.264214296 0.3971985 35.18914406 0.111590335 0.075046403 4.75E-08 7.322894365 0.295426639 SAS(ph)FFAVHSNPMDMPGR ddPTM_A459_MK2206_30min_R2 1 SASFFAVHSNPMDMPGR 17 0 J3KNG8;Q8TF40;Q8TF40-2 J3KNG8 FNIP1 Folliculin-interacting protein 1 1 S(0.135)AS(0.865)FFAVHSNPMDMPGR 70.414 0.021197 1719300 5018.5 7220.8 7463.1 9850.1 9711.1 7076 7733.2 5325.4 7290.2 6550.2 TRUE FALSE 5402.720219 6862.225572 7711.916029 9045.315321 9329.79342 7345.282138 6717.821551 6021.448065 7924.288418 6336.46751 0.852639142 1.08297337 1.217068661 1.427501255 1.472396632 1.159207733 1.060184013 0.95028469 1.250584558 1 12.62946307 -7.113701466 4.757341617 1.062931712 1.22404958 0.12574377 0.177146107 0.500854744 17.53376681 0.075848954 0.058520454 7.70E-08 7.113701466 0.161117868 SAS(ph)FNTDPYVR ddPTM_A459_MK2206_30min_R1 1 SASFNTDPYVR 11 0 Q9UKV8-2;Q9UKV8 Q9UKV8-2 AGO2 Protein argonaute-2 1 S(0.002)AS(0.998)FNTDPYVR 115.24 0.0053152 0 2535.2 2316.9 2837.4 2547.6 2374.2 2534 2791.5 2200.9 2312.1 1819 TRUE FALSE 2319.567927 2166.069389 2644.805193 2743.816593 2279.630587 2677.47289 2605.284128 2181.657763 2552.451069 2044.351453 1.134622877 1.059538655 1.293713559 1.342145251 1.11508742 1.30969305 1.274381724 1.06716375 1.248538291 1 10.99742752 -11.0276684 2.720155829 0.990748184 1.2057758 0.279341562 0.098767202 14934767.21 15246785.59 1026471.399 0.024976197 9.38E-12 11.0276684 0.215027616 SAS(ph)FSQGTR ddPTM_A459_MK2206_30min_R2 2 SASFSQGTR 9 0 Q9UQC2;Q9UQC2-2 Q9UQC2 GAB2 GRB2-associated-binding protein 2 1 S(0.009)AS(0.982)FS(0.009)QGTR;S(0.073)AS(0.894)FS(0.032)QGTR 98.898 0.019289 30677000 25863 46810 36630 39983 41035 42721 46266 30742 36312 45317 TRUE FALSE 27843.09117 44485.48347 37851.22592 36716.261 39423.75972 44346.77759 40191.21862 34760.08495 39470.35212 43838.31 0.63513149 1.014762738 0.863428036 0.83753824 0.899299259 1.011598704 0.91680584 0.792915716 0.900362083 1 15.41990456 -4.746902558 24.96878525 0.90724117 0.635130775 0.578079159 0.071488382 587.8460782 1009640.615 0.01810474 0.391009394 1.79E-05 4.746902558 -0.272110396 SAS(ph)ITNLSLDR ddPTM_A459_MK2206_30min_R1 1 SASITNLSLDR 11 0 Q9Y2I7;E9PDH4;Q9Y2I7-2;Q9Y2I7-3;Q9Y2I7-4 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 S(0.191)AS(0.404)IT(0.404)NLSLDR 138.31 0.0012616 13285000 1191.7 1372.2 1781.7 1438 1655.2 1337.7 1867.8 1440.3 1729.3 1793.5 TRUE FALSE 1090.339657 1282.869531 1660.763168 1548.755009 1589.269879 1413.439418 1743.20247 1427.707609 1909.066923 2015.69232 0.540925639 0.636441146 0.823916999 0.768348916 0.788448645 0.701217842 0.864815752 0.708296398 0.947102345 1 10.97705972 -3.353714867 0.106834607 1.10823838 7.29E-15 0.645942601 0.078652718 53.11601258 0.612058834 1.007953706 8.598671495 0.000442879 3.353714867 -1.10823838 SAS(ph)ITNLSLDR ddPTM_A459_MK2206_30min_R2 4 SASITNLSLDR 11 0 Q9Y2I7;E9PDH4;Q9Y2I7-2;Q9Y2I7-3;Q9Y2I7-4 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 S(0.015)AS(0.936)IT(0.047)NLS(0.002)LDR;S(0.025)AS(0.941)IT(0.034)NLS(0.001)LDR;S(0.12)AS(0.848)IT(0.032)NLS(0.001)LDR;S(0.144)AS(0.799)IT(0.023)NLS(0.034)LDR 102.52 0.0142 38171800 61830 77762 78402 95662 77129 95275 87277 76768 88709 77987 TRUE FALSE 66563.75234 73900.45216 81015.88355 87846.10859 74100.52792 98900.75689 75817.42506 86801.84118 96424.74847 75442.29058 0.882313512 0.979562678 1.073878894 1.164414653 0.982214715 1.310945839 1.004972469 1.150572716 1.278125939 1 16.20308586 -4.821508486 1.005689647 1.135744207 0.752800242 0.364180021 0.105610227 1.896071503 1.605965762 0.033547592 0.777607858 1.51E-05 4.821508486 -0.382943964 SAS(ph)LSNLHSLDR ddPTM_A459_MK2206_30min_R2 3 SASLSNLHSLDR 12 0 B0QY53;B0QY54;A0A087WUW0;Q9Y3M2 B0QY53 CBY1 Protein chibby homolog 1 1 S(0.103)AS(0.897)LSNLHSLDR;S(0.016)AS(0.984)LSNLHSLDR;S(0.004)AS(0.991)LS(0.004)NLHSLDR 122.12 0.0023952 5098800 38703.1 52878.8 42750.6 59942 51082 54164 57740 43882.6 48852 47553.4 TRUE FALSE 41666.23909 50252.91568 44175.88367 55044.54686 49076.26401 56225.24897 50158.66864 49618.20649 53101.05866 46001.73645 0.905753615 1.092413451 0.960309046 1.196575414 1.066835033 1.222241883 1.09036468 1.078615946 1.154327266 1 15.4894007 -5.749791335 24.99986324 1.120205763 0.996784161 0.382056179 0.074891935 228.2212648 489820.6838 0.019006777 0.032566215 1.78E-06 5.749791335 -0.123421602 SAS(ph)NGHVPGTPVYR ddPTM_A459_MK2206_30min_R2 1 SASNGHVPGTPVYR 14 0 A0A087WX19;A0A087WX45;Q6IPM2-2;Q6IPM2-3;Q6IPM2-4;Q6IPM2;C9JP75 A0A087WX19 IQCE IQ domain-containing protein E 1 S(0.004)AS(0.996)NGHVPGTPVYR 88.133 0.021177 4009800 6946.2 10649 9539.3 12441 10339 14810 10660 7958.5 9573.8 9825 TRUE FALSE 7478.006413 10120.18615 9857.335501 11424.5305 9933.038911 15373.60493 9260.329195 8998.703276 10406.51182 9504.411055 0.786793245 1.064788348 1.0371327 1.202024033 1.045097782 1.617523152 0.974319097 0.946792308 1.094913905 1 13.21438152 -4.245913048 1.310155917 1.12989142 8.32E-16 0.222162734 0.182570171 7.479975275 4.277319525 0.054526452 15.95174248 5.68E-05 4.245913048 -1.12989142 SAS(ph)PCIADK ddPTM_A459_MK2206_30min_R1 1 SASPCIADK 9 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 S(0.017)AS(0.983)PCIADK 91.469 0.027177 11287000 5700.4 4902 4516 3400.5 5498.9 5234.9 5426.2 5347 3863.6 3634.2 TRUE FALSE 5215.551046 4582.878909 4209.466502 3662.407099 5279.867169 5531.295514 5064.228099 5300.251743 4265.235046 4084.432133 1.276934192 1.122035759 1.030612424 0.896674735 1.292680842 1.354238566 1.239885481 1.29767164 1.044266353 1 11.9959198 -4.751533255 23.87780025 1.154561285 1.276934639 0.067826423 0.14341886 824.1642978 1986322.877 0.038667957 0.486627979 1.77E-05 4.751533255 0.122373354 SAS(ph)PDDDLGSSNWEAADLGNEER ddPTM_A459_MK2206_30min_R1 5 SASPDDDLGSSNWEAADLGNEER 23 0 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 S(0.183)AS(0.817)PDDDLGSSNWEAADLGNEER;S(0.129)AS(0.871)PDDDLGSSNWEAADLGNEER;S(0.102)AS(0.898)PDDDLGSSNWEAADLGNEER;S(0.414)AS(0.586)PDDDLGSSNWEAADLGNEER;S(0.411)AS(0.589)PDDDLGSSNWEAADLGNEER 238.44 3.45E-37 375575100 9622.08 8968.54 9302.66 9115.91 10462.42 9219.29 9094.44 8902.08 7590.2 7423.32 TRUE FALSE 8803.671568 8384.686416 8671.221358 9818.018968 10045.67966 9741.278233 8487.766501 8824.250053 8379.228452 8342.976925 1.055219456 1.004999354 1.039343802 1.176800446 1.204088151 1.167602202 1.017354666 1.057686019 1.004345155 1 13.02634654 -7.288408153 24.06201479 1.024653603 1.107699639 0.329369447 0.061475747 729.2069598 650607.4509 0.030298365 0.020434319 5.15E-08 7.288408153 0.083046036 SAS(ph)PDDDLGSSNWEAADLGNEER ddPTM_A459_MK2206_30min_R2 4 SASPDDDLGSSNWEAADLGNEER 23 0 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 S(0.152)AS(0.848)PDDDLGSSNWEAADLGNEER;S(0.203)AS(0.797)PDDDLGSSNWEAADLGNEER;S(0.201)AS(0.799)PDDDLGSSNWEAADLGNEER;S(0.411)AS(0.589)PDDDLGSSNWEAADLGNEER 215.83 3.98E-46 33441000 88588 108588 103651 115784 106910 105287 109731 85141 93855 91201 TRUE FALSE 95370.36539 103195.6778 107106.6726 106324.0768 102712.1762 109293.7706 95323.18789 96269.22103 102018.3382 88225.11884 1.080988801 1.169685903 1.214015623 1.205145181 1.164205586 1.238805592 1.080454061 1.091177006 1.156341183 1 16.42890185 -8.787051389 0.556408252 0.999048285 1.177106043 0.467594442 0.051713688 1.154849535 0.751991596 0.064792413 0.025418475 1.63E-09 8.787051389 0.178057758 SAS(ph)PDDDLGSSNWEAADLGNEERK ddPTM_A459_MK2206_30min_R1 4 SASPDDDLGSSNWEAADLGNEERK 24 1 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 S(0.198)AS(0.801)PDDDLGSSNWEAADLGNEERK;S(0.035)AS(0.943)PDDDLGS(0.011)S(0.011)NWEAADLGNEERK;S(0.235)AS(0.737)PDDDLGS(0.004)S(0.023)NWEAADLGNEERK;S(0.046)AS(0.867)PDDDLGS(0.081)S(0.006)NWEAADLGNEERK 204.33 1.62E-31 119689900 5687.04 5760.89 5923.98 5851.78 5719.72 4625.07 4595.9 5933.04 3661.24 2716.52 TRUE FALSE 5203.327384 5385.855014 5521.876743 6302.48511 5491.891441 4886.937466 4289.315897 5881.168057 4041.839 3053.063006 1.704297413 1.764082498 1.808635043 2.064315442 1.79881366 1.600667086 1.404922168 1.92631729 1.323863606 1 11.57604165 -8.907698862 0.457530527 0.946570763 1.831255439 0.650526106 0.177502644 1.178015256 0.497405229 0.310024701 0.111835755 1.24E-09 8.907698862 0.884684676 SAS(ph)PDDDLGSSNWEAADLGNEERK ddPTM_A459_MK2206_30min_R2 2 SASPDDDLGSSNWEAADLGNEERK 24 1 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 S(0.058)AS(0.942)PDDDLGSSNWEAADLGNEERK;S(0.047)AS(0.952)PDDDLGS(0.001)SNWEAADLGNEERK 121.26 7.68E-08 48605200 22484.3 55279 35466.2 50999 51585 40612.2 44728.2 33320.7 42606.7 32874.5 TRUE FALSE 24205.7153 52533.92524 36648.62541 46832.21856 49559.51371 42157.72573 38855.33361 37675.8299 46312.55375 31801.80776 0.761142746 1.65191632 1.152406985 1.47262756 1.558386683 1.325639286 1.221796381 1.184707177 1.456286828 1 14.95682116 -7.212661949 5.745134621 1.231040155 1.346277293 0.032450179 0.253165736 0.77887474 62.50250757 0.094331929 0.071724626 6.13E-08 7.212661949 0.115237138 SAS(ph)PDGGPR ddPTM_A459_MK2206_30min_R2 2 SASPDGGPR 9 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(0.078)AS(0.922)PDGGPR;S(0.05)AS(0.95)PDGGPR 99.973 0.01833 79502000 330640 214915 267700 263040 324500 216710 244800 523440 453580 367510 TRUE FALSE 355954.0526 204242.6336 276624.9844 241548.7906 311758.4995 224957.0509 212657.4659 591855.4052 493031.5685 355518.1788 1.001226024 0.574492799 0.778089563 0.679427396 0.876912963 0.632758223 0.598162003 1.664768331 1.38679707 1 18.43956381 -7.7540581 24.9999954 1.394337058 0.729418714 0.67566312 0.194876256 81.80059931 277056.7487 0.088369763 0.049709521 1.76E-08 7.7540581 -0.664918344 SAS(ph)PDYNR ddPTM_A459_MK2206_30min_R1 4 SASPDYNR 8 0 Q14669;Q14669-2;Q14669-3;G5E9G6;F8W9P3;C9JLJ5;C9JSX9;C9JLD7 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 SAS(1)PDYNR;S(0.002)AS(0.998)PDYNR;SAS(1)PDYNR;SAS(0.999)PDYNR 140.17 0.0023584 93891000 26056.9 27265.3 23846 20883.8 22906 21798.7 25129 24424.5 6080.4 15589.7 TRUE FALSE 23840.62382 25490.32401 22227.39996 22492.27389 21993.60552 23032.92356 23452.69026 24210.95917 6712.479339 17521.06973 1.36068312 1.454838341 1.268609754 1.283727206 1.255266137 1.314584321 1.338542145 1.381819691 0.383108991 1 14.09680324 -8.246652604 24.99996357 0.691554497 1.329659359 0.747957489 0.14876412 301.7220723 510123.0102 0.092966506 0.034816048 5.67E-09 8.246652604 0.638104863 SAS(ph)PDYNR ddPTM_A459_MK2206_30min_R2 3 SASPDYNR 8 0 Q14669;Q14669-2;Q14669-3;G5E9G6;F8W9P3;C9JLJ5;C9JSX9;C9JLD7 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.193)AS(0.761)PDY(0.046)NR;S(0.028)AS(0.874)PDY(0.098)NR;S(0.113)AS(0.886)PDY(0.002)NR 102.06 0.016528 354038000 189795 210406 177434 205484 192915 209801 221028 172420 158427 191234 TRUE FALSE 204325.8511 199957.544 183349.561 188695.2999 185340.1878 217785.1241 192006.7581 194955.886 172206.6941 184994.0502 1.104499582 1.080886351 0.991110583 1.020007398 1.001871074 1.177254748 1.037907748 1.053849493 0.930876933 1 17.49711935 -8.244516535 22.48747489 0.965438505 1.057039983 0.32424184 0.053665242 233.1604595 309832.6093 0.037624915 0.014103296 5.69E-09 8.244516535 0.091601478 SAS(ph)PEVSEGHENQHGQESEAK ddPTM_A459_MK2206_30min_R1 1 SASPEVSEGHENQHGQESEAK 21 0 O60930 O60930 RNASEH1 Ribonuclease H1 1 S(0.049)AS(0.83)PEVS(0.121)EGHENQHGQESEAK 119.18 4.94E-05 4300200 2376.5 1402.4 1940.7 1513.5 2728.3 2495.4 2220.6 2155.1 1472.6 1518.2 TRUE FALSE 2174.366196 1311.103505 1808.970691 1630.070032 2619.626034 2636.687392 2072.467826 2136.258188 1625.68204 1706.286078 1.274326869 0.768396063 1.060180186 0.9553322 1.535279498 1.545278618 1.214607476 1.251992978 0.952760537 1 10.73664384 -6.224907081 24.85908275 1.275581909 1.00023438 0.21838272 0.214265716 759.8296085 517040.0153 0.064351107 0.083074007 5.96E-07 6.224907081 -0.275347529 SAS(ph)PEVSEGHENQHGQESEAK ddPTM_A459_MK2206_30min_R2 2 SASPEVSEGHENQHGQESEAK 21 0 O60930 O60930 RNASEH1 Ribonuclease H1 1 S(0.19)AS(0.809)PEVS(0.001)EGHENQHGQESEAK;S(0.245)AS(0.722)PEVS(0.034)EGHENQHGQESEAK 116.2 5.07E-05 10150800 10542.3 15402.9 12905.1 19605.3 19473.5 15283.7 19861 17400.1 15441.9 19913.1 TRUE FALSE 11349.42659 14638.01438 13335.34959 18003.48428 18708.87254 15865.33191 17253.22684 19674.35281 16785.00855 19263.33718 0.5891724 0.759889849 0.692265804 0.934598409 0.971216585 0.823602461 0.895650981 1.021336679 0.871344793 1 14.23357004 -5.759846754 24.55088993 0.927710707 0.688387323 0.741328665 0.067783841 16.9626285 261472.0955 0.018462799 0.029924844 1.74E-06 5.759846754 -0.239323384 SAS(ph)PHDVDLCLVSPCEFEHR ddPTM_A459_MK2206_30min_R1 2 SASPHDVDLCLVSPCEFEHR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 S(0.188)AS(0.812)PHDVDLCLVSPCEFEHR;S(0.167)AS(0.833)PHDVDLCLVSPCEFEHR 162.44 3.53E-07 25525000 4479.66 3966.83 4727.2 3008.17 4877.16 4602.48 5344.71 3933.62 4068.65 4678.52 TRUE FALSE 4098.641393 3708.588646 4406.330835 3239.859775 4682.89239 4863.06844 4988.174148 3899.228775 4491.600727 5258.130379 0.779486452 0.70530557 0.838003343 0.616161932 0.89060028 0.924866462 0.948659274 0.741561828 0.854220113 1 12.3603342 -6.30164656 24.68148138 0.884740618 0.740012892 0.467371194 0.082553232 434.5513436 266751.4757 0.025459579 0.02886885 4.99E-07 6.30164656 -0.144727725 SAS(ph)PHDVDLCLVSPCEFEHR ddPTM_A459_MK2206_30min_R2 3 SASPHDVDLCLVSPCEFEHR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 S(0.036)AS(0.964)PHDVDLCLVSPCEFEHR;S(0.2)AS(0.8)PHDVDLCLVSPCEFEHR;S(0.185)AS(0.815)PHDVDLCLVSPCEFEHR 115.53 0.00014104 59189000 49095 58303.9 49382.4 72062.6 57087.4 66541.7 65537.4 58028.7 55378.7 63767.5 TRUE FALSE 52853.75095 55408.61311 51028.78457 66174.85506 54845.86183 69073.99102 56932.26066 65613.25033 60195.43922 61686.7717 0.85680851 0.898225204 0.827224106 1.07275601 0.889102482 1.119753703 0.92292495 1.063651874 0.975824112 1 15.91267353 -5.753878439 24.99998512 1.005311352 0.864499846 0.497786302 0.066951659 136.5119736 451367.0581 0.016708934 0.02824023 1.76E-06 5.753878439 -0.140811506 SAS(ph)PHDVDLCLVSPCEFEHRK ddPTM_A459_MK2206_30min_R1 1 SASPHDVDLCLVSPCEFEHRK 21 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 S(0.192)AS(0.808)PHDVDLCLVSPCEFEHRK 74.147 0.0022633 2582900 1441.4 1193.7 978.7 1301.1 1632.3 1285.5 1209.1 1349.9 949.72 981.06 TRUE FALSE 1318.801361 1115.989913 912.2685708 1401.310947 1567.282035 1358.283899 1128.443145 1338.097967 1048.446793 1102.601119 1.196082008 1.012142917 0.8273786 1.270913772 1.421440634 1.23189055 1.023437329 1.213582993 0.950884934 1 10.10669526 -3.846431832 15.2274587 1.123445778 1.106716475 0 0.170519983 0 0 0.041346416 0 0.000142419 3.846431832 -0.016729303 SAS(ph)PHDVDLCLVSPCEFEHRK ddPTM_A459_MK2206_30min_R2 1 SASPHDVDLCLVSPCEFEHRK 21 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 S(0.478)AS(0.522)PHDVDLCLVSPCEFEHRK 79.393 0.0015127 3962800 14134 30219 22765 32499 36856 28853 27825 22285 28091 22988 TRUE FALSE 15216.10991 28718.3684 23523.97374 29843.72774 35408.84825 29951.02113 24171.54408 25197.72602 30534.3044 22237.90344 0.684242107 1.291415285 1.057832354 1.342020745 1.592274575 1.346845543 1.08695247 1.133098094 1.373074781 1 14.44073316 -4.759359899 24.99380312 1.257173944 0.684241373 0.492871225 0.170992279 48.61386988 584157.7798 0.04445242 0.284033652 1.74E-05 4.759359899 -0.572932571 SAS(ph)PPPATSSSSSSR ddPTM_A459_MK2206_30min_R1 1 SASPPPATSSSSSSR 15 0 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 S(0.011)AS(0.973)PPPAT(0.01)S(0.001)SSSS(0.003)S(0.002)R 94.781 0.011244 940800 258.16 171.66 189.18 242.3 314 295.15 130.85 359.16 0 160.07 TRUE FALSE 236.2021363 160.4849028 176.3389887 260.961988 301.4927151 311.8611379 122.1212352 356.019902 0 179.9006801 1.312958552 0.89207502 0.980201902 1.450589224 1.675884243 1.733518394 0.678825868 1.978980301 0 1 7.49105683 -8.268403229 24.99587655 0.500000074 1.31733984 0.3636712 0.442664002 646.3012346 2319785.4 0.383374244 0.10759382 5.39E-09 8.268403229 0.817339767 SAS(ph)PSNIK ddPTM_A459_MK2206_30min_R1 1 SASPSNIK 8 0 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 SAS(0.598)PS(0.402)NIK 87.258 0.032723 7132000 6821.3 6547.7 5688.3 5138.8 4807.6 3912.6 6284 6488.4 1311.1 3982.1 TRUE FALSE 6241.112615 6121.44354 5302.194045 5534.591266 4616.103112 4134.128031 5864.805826 6431.672603 1447.393537 4475.432611 1.394527224 1.367788116 1.1847333 1.23666062 1.03143171 0.923738192 1.31044445 1.437106345 0.323408632 1 12.12781143 -1.522878745 0.200003764 0.895424308 3.441069149 0.246746221 0.272623589 83.76422557 1.012055484 0.501304694 66.81835523 0.03 1.522878745 2.545644841 SAS(ph)PSNIK ddPTM_A459_MK2206_30min_R2 2 SASPSNIK 8 0 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 S(0.301)AS(0.658)PS(0.041)NIK;S(0.001)AS(0.983)PS(0.016)NIK 94.309 0.022842 18304400 113786 151140 136032 134319 135965 117538 150933 120408 118118 147843 TRUE FALSE 122497.5436 143634.6074 140567.239 123344.708 130626.3309 122010.991 131115.3158 136145.739 128391.6901 143018.895 0.856513006 1.004305112 0.982857817 0.86243645 0.913350162 0.853110989 0.916769185 0.951942322 0.897725368 1 17.12584624 -10.94170407 3.158629954 1.001201043 0.917700096 0.208131941 0.049302078 24939624.87 35111770.1 273842.5666 0.012943367 1.14E-11 10.94170407 -0.083500947 SAS(ph)PSSQGWQGR ddPTM_A459_MK2206_30min_R1 1 SASPSSQGWQGR 12 0 Q5VV67-2;Q5VV67;X6R7H2 Q5VV67-2 PPRC1 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 1 S(0.084)AS(0.908)PS(0.008)SQGWQGR 187.74 2.98E-13 0 1588.9 1657.9 1828 1242.9 1852.2 1479.4 1981.3 1648.1 1338.2 1406.9 TRUE FALSE 1453.755711 1549.970409 1703.920453 1338.628373 1778.422952 1563.16235 1849.131092 1633.690835 1477.310679 1581.197394 0.919401788 0.980251052 1.077614003 0.846591563 1.124731776 0.988594059 1.169449874 1.033198538 0.934298706 1 10.62680177 -6.281584818 24.99308606 1.047103057 0.966388564 0.198767585 0.082871876 1422.143666 1764352.667 0.025334685 0.02876148 5.23E-07 6.281584818 -0.080714493 SAS(ph)PSVGEERPR ddPTM_A459_MK2206_30min_R1 2 SASPSVGEERPR 12 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 S(0.001)AS(0.992)PS(0.007)VGEERPR;SAS(0.951)PS(0.049)VGEERPR 121.21 0.010722 8827500 4334.2 3545.5 3519.4 3226.9 6089.7 5046.4 5096.7 3780.9 2870.8 2538.9 TRUE FALSE 3965.55353 3314.687306 3280.512934 3475.436397 5847.134354 5332.122807 4756.708442 3747.84399 3169.229933 2853.4381 1.38974577 1.161646824 1.149670264 1.217982054 2.04915409 1.868666016 1.667009508 1.313448499 1.110670645 1 11.47848555 -6.099290718 24.88372401 1.551960829 1.21901701 0.144712287 0.308914018 69.05861615 17295.15698 0.096398092 0.124449435 7.96E-07 6.099290718 -0.332943819 SAS(ph)PSVPGPTKPKPK ddPTM_A459_MK2206_30min_R2 1 SASPSVPGPTKPKPK 15 2 Q03164-2;Q03164;Q03164-3;A0A3B3ITZ6 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.033)AS(0.935)PS(0.033)VPGPTKPKPK 115.66 0.0026541 19157000 48191 80165 77137 76139 61329 67313 72458 58752 62789 86999 TRUE FALSE 51880.54001 76184.12267 79708.70908 69918.20014 58920.91531 69874.64338 62944.17756 66431.08813 68250.27372 84160.22975 0.616449601 0.905227123 0.9471066 0.830774825 0.700104022 0.830257279 0.747908813 0.789340622 0.810956362 1 16.36085102 -8.611278865 14.95933404 1.000000001 0.801974396 0.311696066 0.090129679 775.9043005 131303.6953 0.088593366 0.022874653 2.45E-09 8.611278865 -0.198025605 SAS(ph)PTVPR ddPTM_A459_MK2206_30min_R2 2 SASPTVPR 8 0 K7EQ87;K7EKI0;Q92817 K7EQ87 EVPL Envoplakin 1 S(0.005)AS(0.497)PT(0.497)VPR;S(0.061)AS(0.763)PT(0.176)VPR 89.886 0.02904 70124000 138362 174271 150321 201104 174547 182599 181849 137605 142791 171694 TRUE FALSE 148955.1011 165616.9556 155332.6271 184673.1599 167693.4078 189547.9329 157972.0079 155590.446 155210.7031 166091.6388 0.896824802 0.99714204 0.935222436 1.111875114 1.009643886 1.141225014 0.951113548 0.936774705 0.934488359 1 17.34161992 -10.56452364 5.638254107 1.00000002 0.99488019 0 0.075789543 1.99E-08 3.42E-09 0.076038185 0.018441896 2.73E-11 10.56452364 -0.00511983 SAS(ph)QDCIETTPGAQEGK ddPTM_A459_MK2206_30min_R2 1 SASQDCIETTPGAQEGK 17 0 Q99767-2;Q99767 Q99767-2 APBA2 Amyloid beta A4 precursor protein-binding family A member 2 1 SAS(1)QDCIETTPGAQEGK 240.68 1.28E-22 7490600 34996 31283 31974 31486 26562 27800 52880 44374 37099 51776 TRUE FALSE 37675.32067 29729.53171 33039.9972 28913.49308 25519.04242 28857.94848 45936.79248 50173.83416 40325.80396 50086.55336 0.752204297 0.593563137 0.659658032 0.577270567 0.509498872 0.576161595 0.917148204 1.001742599 0.805122358 1 15.61213572 -7.266617817 23.10757187 0.931148583 0.60659363 0.800135534 0.078233042 66.06322852 294788.1312 0.032162609 0.022474514 5.41E-08 7.266617817 -0.324554953 SAS(ph)QDCIETTPGAQEGKK ddPTM_A459_MK2206_30min_R2 2 SASQDCIETTPGAQEGKK 18 1 Q99767-2;Q99767 Q99767-2 APBA2 Amyloid beta A4 precursor protein-binding family A member 2 1 S(0.169)AS(0.831)QDCIETTPGAQEGKK;S(0.179)AS(0.821)QDCIETTPGAQEGKK 128.29 0.00035245 19467600 35560 50396 43084 43548 50594 43239 73163 60655 70840 68207 TRUE FALSE 38282.50094 47893.40792 44520.39906 39989.9891 48607.42535 44884.49044 63556.61022 68582.81676 77001.53515 65981.41118 0.580201306 0.725862134 0.674741541 0.606079627 0.736683628 0.680259631 0.963250241 1.039426341 1.167018616 1 16.00977201 -7.379345897 2.059872449 1.082997241 0.663417306 0.906239734 0.059777587 0.08852959 0.733423254 0.030814208 0.017949116 4.17E-08 7.379345897 -0.419579935 SAS(ph)QSS(ph)LDKLDQELK ddPTM_A459_MK2206_30min_R2 1 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 S(0.013)AS(0.947)QS(0.359)S(0.68)LDKLDQELK 133.96 0.016908 5984300 110610 81041 82873 65925 75085 39207 97821 75007 57674 89966 TRUE FALSE 119078.3866 77016.62178 85635.94446 60538.71662 72136.78563 40699.04986 84976.9852 84810.67244 62690.38027 87030.41679 1.368238727 0.884939135 0.983977184 0.695604122 0.828868668 0.467641675 0.976405587 0.974494614 0.720327244 1 16.40923208 SAS(ph)QSSLDK ddPTM_A459_MK2206_30min_R2 1 SASQSSLDK 9 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.003)AS(0.997)QSSLDK 107.11 0.0095146 0 42297 24660 25087 26127 24373 18686 27295 21558 18950 26271 TRUE FALSE 45535.29084 23435.42026 25923.38806 23992.34052 23415.99356 19397.10882 23711.13371 24375.70462 20598.23675 25413.77942 1.791755964 0.922154075 1.020052454 0.944068182 0.921389659 0.76325164 0.93300305 0.959153073 0.810514501 1 14.63332332 -4.761389885 9.266385598 0.917215212 1.797148018 0.925350579 0.074340681 0.019620179 25.86868673 0.018892766 0.107879146 1.73E-05 4.761389885 0.879932806 SAS(ph)QSSLDKLDQELK ddPTM_A459_MK2206_30min_R1 2 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.025)AS(0.659)QS(0.158)S(0.158)LDKLDQELK;S(0.037)AS(0.951)QS(0.009)S(0.003)LDKLDQELK 72.21 0.025655 39650000 9635 10171.1 9399.7 7913.7 5689.9 5498.1 6359.4 6173.4 6888.8 6663.7 TRUE FALSE 8815.492655 9508.959541 8761.674553 8523.214545 5463.259234 5809.397671 5935.176029 6119.426615 7604.915412 7489.249464 1.177086262 1.269681239 1.169900214 1.138059907 0.729480205 0.775698246 0.792492767 0.817094776 1.015444264 1 12.87060543 -6.143339237 4.849696854 0.839656287 1.203081373 0.763634902 0.091076164 0.105375945 3.754224965 0.027641651 0.036195632 7.19E-07 6.143339237 0.363425087 SAS(ph)QSSLDKLDQELK ddPTM_A459_MK2206_30min_R2 1 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.073)AS(0.923)QS(0.003)S(0.001)LDKLDQELK 64.331 0.038057 55180000 48093 35858 36618 24471 28571 21125 35977 25421 19297 29119 TRUE FALSE 51775.03706 34077.34386 37838.82584 22471.64102 27449.15898 21928.92668 31253.17668 28743.61198 20975.41818 28168.84941 1.83802456 1.209752779 1.34328617 0.79774792 0.97445084 0.778481448 1.109494258 1.02040419 0.744631698 1 14.78181302 -2.791212434 0.721377019 0.922701873 17.72964693 0.767819106 0.149742207 19.73664349 0.696876995 0.056408919 480.8533871 0.001617289 2.791212434 16.80694506 SAS(ph)SDTSEELNSQDSPPK ddPTM_A459_MK2206_30min_R1 1 SASSDTSEELNSQDSPPK 18 0 J3QRP6;O14745;O14745-2 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 SAS(0.815)S(0.179)DT(0.006)SEELNSQDSPPK 433.04 0 32819000 4779.9 4810.5 4581 2897.9 3516.5 3570.3 5231.8 3537.4 5358 6519.9 TRUE FALSE 4373.344405 4497.335576 4270.054483 3121.09676 3376.430359 3772.447301 4882.796168 3506.472885 5914.983274 7327.634435 0.596828955 0.613749992 0.582733012 0.425935107 0.460780404 0.514824714 0.66635368 0.478527268 0.807215934 1 12.83913182 -8.472875532 3.297041309 0.998410937 0.543074782 0.813242746 0.071972847 0.092152306 2.170410136 0.074025458 0.019653548 3.37E-09 8.472875532 -0.455336155 SAS(ph)SDTSEELNSQDSPPK ddPTM_A459_MK2206_30min_R2 1 SASSDTSEELNSQDSPPK 18 0 J3QRP6;O14745;O14745-2 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 S(0.016)AS(0.717)S(0.261)DT(0.006)SEELNSQDSPPK 240.13 5.03E-25 8940800 63528 48409 38037 54147 33980 34931 52151 46314 34088 64682 TRUE FALSE 68391.75252 46005.07945 39305.1346 49723.01689 32645.77446 36260.32368 45303.51106 52367.39882 37052.91262 62571.43164 1.093018822 0.73524096 0.628164221 0.794660048 0.521736096 0.579502862 0.72402868 0.836921858 0.592169807 1 15.93321649 -10.43247148 22.49220929 1 0.715781904 0.220511122 0.155831181 0 0 0.151712919 0.036795788 3.69E-11 10.43247148 -0.284218096 SAS(ph)SGAEGDVSSER ddPTM_A459_MK2206_30min_R1 1 SASSGAEGDVSSER 14 0 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 S(0.002)AS(0.499)S(0.499)GAEGDVSSER 273.07 1.39E-44 11301000 2339.6 2114.1 2306.2 1625.7 1982.5 1926.7 2761.3 2003.7 2685.2 3225.2 TRUE FALSE 2140.604734 1976.471706 2149.661569 1750.911696 1903.532827 2035.788089 2577.098715 1986.181862 2964.336149 3624.762125 0.590550403 0.545269355 0.593049004 0.48304182 0.525146964 0.561633569 0.710970438 0.547948195 0.817801568 1 11.82367061 -8.566641103 0.915339563 1.004854378 0.551907678 0.841924413 0.060591979 0.238645436 0.438727174 0.056950596 0.019573313 2.71E-09 8.566641103 -0.452946701 SAS(ph)SGAEGDVSSER ddPTM_A459_MK2206_30min_R2 2 SASSGAEGDVSSER 14 0 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 S(0.026)AS(0.487)S(0.487)GAEGDVSSER;S(0.002)AS(0.499)S(0.499)GAEGDVSSER 198.81 8.92E-05 36840000 52424 50516 42028 47989 39540 40209 48641 47229 32358 48814 TRUE FALSE 56437.62175 48007.4489 43429.19254 44068.14519 37987.46093 41739.18167 42254.37827 53401.99246 35172.44035 47221.20318 1.195175429 1.016650269 0.919696865 0.933227919 0.804457709 0.883907628 0.894817909 1.130890127 0.744844222 1 15.52714718 -4.762991083 1.764506266 0.912228657 1.300797059 0.436126677 0.098367791 0.887380269 2.709295606 0.026299671 0.594397937 1.73E-05 4.762991083 0.388568402 SAS(ph)SGAEGDVSSEREP ddPTM_A459_MK2206_30min_R1 1 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 SAS(0.5)S(0.5)GAEGDVSSEREP 173.19 2.37E-05 251010000 3556.5 3275.1 3872.2 3300.7 3641 3822.6 3915.7 3848 3382.5 2957.3 TRUE FALSE 3254.000999 3061.890395 3609.365853 3554.920486 3495.97126 4039.032309 3654.490798 3814.357342 3734.122979 3323.67265 0.979037752 0.921237052 1.085957082 1.069575996 1.051839825 1.215231683 1.099533914 1.147633279 1.123493007 1 11.69856258 -5.435147996 1.413323606 1.116077165 0.938018934 0.480345041 0.058890302 0.396344986 1.397474352 0.017846296 0.070537298 3.67E-06 5.435147996 -0.178058231 SAS(ph)SSWLEGTSTQAK ddPTM_A459_MK2206_30min_R2 4 SASSSWLEGTSTQAK 15 0 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 S(0.135)AS(0.674)S(0.191)SWLEGTSTQAK;S(0.001)AS(0.774)S(0.214)S(0.011)WLEGTSTQAK;S(0.002)AS(0.496)S(0.496)S(0.006)WLEGTSTQAK;SAS(0.333)S(0.333)S(0.333)WLEGTS(0.001)TQAK 253.79 2.08E-28 97852000 308271 347689 349046 369125 365757 322241 382597 262831 304771 331716 TRUE FALSE 331872.4648 330423.2698 360683.0194 338966.3067 351395.5424 334504.1071 332361.5543 297183.9141 331279.4307 320892.1341 1.034218136 1.029701993 1.124000812 1.056324761 1.095058137 1.042419154 1.035742292 0.92611779 1.032370057 1 18.2917289 -7.554277113 7.865154836 0.983431595 1.06377189 0.477417407 0.036207804 0.177913207 36.7279986 0.016805828 0.009742625 2.79E-08 7.554277113 0.080340295 SAS(ph)TDLGTADVVLGR ddPTM_A459_MK2206_30min_R1 1 SASTDLGTADVVLGR 15 0 A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5;H7C0E9;Q9Y2K5-2;Q9Y2K5-3 A0A0U1RRA6;Q9Y2K5-3 R3HDM2 R3H domain-containing protein 2 1 S(0.016)AS(0.75)T(0.234)DLGTADVVLGR 108.36 0.0057404 0 1032.4 843.85 815.83 947.37 880.26 868.22 825.3 936.89 670.3 745.82 TRUE FALSE 944.5889587 788.9152116 760.4537326 1020.336602 845.1973802 917.3778661 770.2457428 928.6988695 739.9800837 838.2178123 1.126901558 0.941181636 0.907226882 1.217269052 1.008326676 1.094438525 0.918908822 1.107944565 0.882801669 1 9.711181369 -8.266753976 24.97623661 0.941400844 1.035131491 0.137614579 0.098333619 980.5394904 4608021.773 0.082978614 0.023934597 5.41E-09 8.266753976 0.093730648 SAS(ph)TDLGTADVVLGR ddPTM_A459_MK2206_30min_R2 3 SASTDLGTADVVLGR 15 0 A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5;H7C0E9;Q9Y2K5-2;Q9Y2K5-3 A0A0U1RRA6;Q9Y2K5-3 R3HDM2 R3H domain-containing protein 2 1 S(0.002)AS(0.499)T(0.499)DLGTADVVLGR;S(0.01)AS(0.495)T(0.495)DLGTADVVLGR;SAS(0.983)T(0.017)DLGTADVVLGR 200.63 1.83E-05 14974900 51992 72229 58119 66372 47239 50533 64313 43402 46746 47585.8 TRUE FALSE 55972.5475 68642.21289 60056.65845 60949.19529 45384.1595 52456.06873 55868.62585 49074.79042 50811.88258 46033.07924 1.215920126 1.491149713 1.304641346 1.324030377 0.985903186 1.139529868 1.213662583 1.066076639 1.103812376 1 15.49038333 -6.177892853 6.902269474 1.097638311 1.345258 0.653626727 0.088439426 0.162155619 11.45676233 0.025667948 0.033238891 6.64E-07 6.177892853 0.247619689 SAS(ph)TEKLEQGTSALIR ddPTM_A459_MK2206_30min_R1 2 SASTEKLEQGTSALIR 16 1 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 S(0.037)AS(0.812)T(0.15)EKLEQGTS(0.001)ALIR;S(0.005)AS(0.939)T(0.052)EKLEQGT(0.003)S(0.001)ALIR 87.228 0.0081914 52208000 5986.4 6456.7 5806 6419.3 6382.4 5713.9 5075.4 5752.1 4406.3 2503.4 TRUE FALSE 5477.225244 6036.367656 5411.904896 6913.715598 6128.175493 6037.41608 4736.829327 5701.809996 4864.350653 2813.540092 1.946737941 2.145470638 1.923521514 2.457301255 2.178101357 2.145843273 1.683583376 2.026560778 1.728907531 1 11.45817081 -8.996713912 0.579257131 0.964597282 2.136069645 0.772195682 0.17908899 0.810403445 0.487768796 0.246544972 0.081415464 1.01E-09 8.996713912 1.171472363 SAS(ph)TLCLPSVGAARPQVK ddPTM_A459_MK2206_30min_R1 2 SASTLCLPSVGAARPQVK 18 1 Q8IUC4-2;Q8IUC4;A8MT19 Q8IUC4-2 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 S(0.035)AS(0.821)T(0.144)LCLPSVGAARPQVK;S(0.051)AS(0.798)T(0.15)LCLPSVGAARPQVK 122.13 0.00050391 554460000 7219.1 7280 7307.5 6270.6 7539.3 5920 7708.9 7678.6 6480.6 5536.8 TRUE FALSE 6605.077636 6806.070677 6811.48726 6753.562699 7238.993716 6255.185284 7194.653347 7611.46681 7154.281561 6222.740585 1.061441907 1.09374167 1.094612119 1.08530359 1.163312791 1.005213892 1.156187254 1.223169551 1.149699471 1 12.60333439 SAS(ph)TLCLPSVGAARPQVK ddPTM_A459_MK2206_30min_R2 2 SASTLCLPSVGAARPQVK 18 1 Q8IUC4-2;Q8IUC4;A8MT19 Q8IUC4-2 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 S(0.035)AS(0.844)T(0.121)LCLPSVGAARPQVK;S(0.033)AS(0.943)T(0.024)LCLPSVGAARPQVK 156.08 1.34E-05 441750000 62053 84030 61944 71347 72412 67374 71324 49988 54374 66372 TRUE FALSE 66803.82539 79857.19239 64009.18204 65517.72187 69568.74104 69937.96478 61959.07312 56521.60323 59103.35223 64206.28708 1.040456137 1.243759701 0.996930129 1.020425333 1.083519141 1.089269727 0.965000095 0.880312596 0.920522817 1 15.97042695 -7.363211904 3.82460006 0.924976417 1.080526982 0.493495475 0.068457134 0.199284965 5.269601054 0.031053364 0.020211434 4.33E-08 7.363211904 0.155550564 SAS(ph)VNKEPVSLPGIMR ddPTM_A459_MK2206_30min_R1 1 SASVNKEPVSLPGIMR 16 1 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.048)AS(0.948)VNKEPVS(0.004)LPGIMR 117.13 0.0088577 12977000 1869 1296.6 1884.7 1470.6 1320.6 1526.2 1952.6 2065 2307.7 1794.3 TRUE FALSE 1710.031735 1212.191104 1756.771815 1583.865867 1267.997706 1612.612125 1822.345617 2046.945923 2547.593673 2016.59143 0.847981257 0.601108924 0.87115902 0.785417335 0.628782651 0.79967221 0.903676168 1.015052376 1.263316721 1 10.9777031 -7.640113455 1.822622941 1.129333042 0.748405574 0.693375128 0.101625604 0.190495171 1.239985251 0.066686311 0.029919226 2.29E-08 7.640113455 -0.380927468 SAS(ph)VSSISLTK ddPTM_A459_MK2206_30min_R1 1 SASVSSISLTK 11 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 S(0.002)AS(0.498)VS(0.498)S(0.002)ISLTK 188.27 1.95E-05 19171000 3086.7 2881.2 3418.5 2280.3 2349.9 2051.3 2108.1 1966 1578.6 1480.1 TRUE FALSE 2824.159956 2693.633356 3186.461744 2455.929101 2256.298507 2167.442833 1967.472495 1948.811469 1742.701119 1663.465962 1.697756384 1.619289735 1.915555723 1.476392759 1.356383935 1.302967949 1.182754887 1.171536727 1.047632569 1 10.69997663 -6.535644543 0.790731415 1.069013346 1.758624357 0.877169883 0.099002655 0.221130676 0.307039703 0.063124641 0.078081343 2.91E-07 6.535644543 0.689611011 SAS(ph)VSSISLTK ddPTM_A459_MK2206_30min_R2 1 SASVSSISLTK 11 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 S(0.002)AS(0.988)VS(0.01)SISLTK 163.71 0.00064187 7623000 52164 59965 46929 44879 43047 36296 35072 23335 28958 30743 TRUE FALSE 56157.71595 56987.2253 48493.58944 41212.24214 41356.75849 37677.26971 30467.00427 26384.96462 31476.7145 29739.85843 1.888298025 1.916190201 1.630592478 1.385757845 1.390617194 1.266894723 1.024450212 0.887192005 1.058401625 1 14.86011016 -5.890723178 0.53892099 0.938818791 2.119260813 0.945765743 0.081553452 0.325114078 0.159062616 0.062375236 0.212745518 1.29E-06 5.890723178 1.180442022 SAS(ph)WGSADQLK ddPTM_A459_MK2206_30min_R1 1 SASWGSADQLK 11 0 Q86VQ1;H7C0Q2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 S(0.078)AS(0.921)WGSADQLK 117.79 0.005496 5742200 1898 2305.4 2258.6 1831.6 1731.6 1580.8 2171.1 1633.4 2091 2012.9 TRUE FALSE 1736.565133 2155.318041 2105.292525 1972.670149 1662.626705 1670.30353 2026.26988 1619.119356 2308.366933 2262.273249 0.767619532 0.952722242 0.9306093 0.8719858 0.734936289 0.7383297 0.895678664 0.715704594 1.020374941 1 11.14355748 -8.285574248 24.47774545 1.010187592 0.831567345 0.450326806 0.081230308 683.0397244 692734.8393 0.081975348 0.021216086 5.18E-09 8.285574248 -0.178620247 SAS(ph)WGSTDQLK ddPTM_A459_MK2206_30min_R1 3 SASWGSTDQLK 11 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 S(0.03)AS(0.97)WGSTDQLK;S(0.079)AS(0.919)WGS(0.001)T(0.001)DQLK;SAS(0.989)WGS(0.005)T(0.005)DQLK 166.7 0.00057945 81287000 10449.7 13018.1 12226.9 9643.9 9097.4 8462.3 9974.6 9716.1 10827.3 11080.7 TRUE FALSE 9560.898141 12170.61932 11396.97209 10386.67485 8735.031294 8941.428113 9309.212634 9631.153162 11952.83658 12453.46077 0.767730217 0.977288125 0.915165054 0.834039231 0.701413965 0.717987416 0.747520132 0.773371622 0.959800396 1 13.6042591 -5.948659449 5.623834106 0.794459595 0.894045677 0.057026563 0.104942867 0.370509748 25.82819721 0.029616739 0.044089363 1.13E-06 5.948659449 0.099586082 SAS(ph)WGSTDQLK ddPTM_A459_MK2206_30min_R2 3 SASWGSTDQLK 11 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 SAS(0.799)WGS(0.046)T(0.155)DQLK;S(0.125)AS(0.874)WGSTDQLK;SAS(0.999)WGSTDQLK 196.02 2.06E-05 125034000 394086 418874 402358 439867 417344 358983 451055 387145 326433 421832 TRUE FALSE 424257.5272 398073.3263 415772.4149 403928.459 400956.9776 372644.3496 391830.9367 437746.1808 354825.5523 408067.6564 1.039674477 0.975508154 1.018881081 0.98985659 0.982574755 0.913192564 0.960210716 1.072729421 0.869526283 1 18.63844884 -6.182599133 2.668384748 0.966508874 1.007196231 0.130938733 0.052076542 0.663428574 9.253837866 0.016241533 0.021616334 6.57E-07 6.182599133 0.040687357 SASAPT(ph)LAETEKETAEHLDLAGASSR ddPTM_A459_MK2206_30min_R2 2 SASAPTLAETEKETAEHLDLAGASSR 26 1 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.022)AS(0.184)APT(0.595)LAET(0.198)EKET(0.001)AEHLDLAGASSR;S(0.129)AS(0.408)APT(0.453)LAET(0.01)EKETAEHLDLAGASSR 82.216 6.95E-05 9261500 27796.9 35058.4 32873.9 34830.4 28748.5 29864.8 40249 34448 28687.1 37424 TRUE FALSE 29925.05204 33317.45084 33969.89942 31984.6449 27619.68944 31001.32589 34964.25795 38950.47188 31182.2521 36202.85794 0.826593637 0.920298914 0.938320932 0.883483977 0.762914615 0.856322612 0.965787232 1.075894946 0.86132018 1 15.14381597 -7.309949597 5.530998731 0.9835885 0.866732884 0.397693223 0.066841581 0.22346939 16.43814175 0.029035788 0.019611658 4.90E-08 7.309949597 -0.116855616 SASAS(ph)HQADIK ddPTM_A459_MK2206_30min_R1 1 SASASHQADIK 11 0 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 SAS(0.305)AS(0.694)HQADIK 113.52 0.0070489 25072000 8178.7 6378.6 4159.8 4858.9 6636 5585.8 7015.1 6668.1 1714.9 4772.4 TRUE FALSE 7483.058617 5963.351981 3877.444366 5233.13332 6371.674068 5902.063169 6547.135479 6609.801505 1893.169992 5363.640942 1.395145331 1.111810437 0.722912739 0.975668091 1.187938219 1.100383719 1.220651336 1.232334822 0.352963596 1 12.38899695 -8.244110252 24.81445474 0.676481714 1.105329962 0.386997612 0.221967589 676.8033216 969152.9789 0.151391734 0.056914342 5.70E-09 8.244110252 0.428848248 SASFS(ph)QGTR ddPTM_A459_MK2206_30min_R2 1 SASFSQGTR 9 0 Q9UQC2;Q9UQC2-2 Q9UQC2 GAB2 GRB2-associated-binding protein 2 1 S(0.006)AS(0.309)FS(0.685)QGTR 82.494 0.041196 6536000 5650 9478.2 10108 10688 9830.4 13837 13852 8111.3 7271.1 11580 TRUE FALSE 6082.568344 9007.526371 10444.99568 9814.756211 9444.409102 14363.57673 12033.21576 9171.47476 7903.527135 11202.14555 0.542982442 0.804089389 0.932410281 0.876149678 0.843089305 1.282216578 1.074188485 0.818724835 0.705536908 1 13.45148746 -4.413893777 1.146568764 0.954451067 5.53E-10 0.402463082 0.148874532 3.691127419 2.322343146 0.049619238 5.184488982 3.86E-05 4.413893777 -0.954451066 SASLS(ph)HPGGEGEPAR ddPTM_A459_MK2206_30min_R1 2 SASLSHPGGEGEPAR 15 0 C9JXU1;A6NN40;Q2M3G4-2;Q2M3G4 C9JXU1 SHROOM1 Protein Shroom1 1 S(0.221)AS(0.195)LS(0.584)HPGGEGEPAR;S(0.014)AS(0.292)LS(0.694)HPGGEGEPAR 147.39 0.000325 17446100 3922.1 3794.5 4069 3183.8 3746.4 3300 3514.1 3066.1 2852.3 2887.4 TRUE FALSE 3588.504799 3547.47736 3792.807617 3429.016828 3597.172955 3486.843148 3279.680801 3039.293411 3148.806792 3245.112911 1.105818163 1.093175325 1.168775239 1.056671038 1.108489305 1.074490548 1.010652292 0.936575551 0.970322722 1 11.66405296 -7.290465589 2.099312799 0.964846871 1.106456569 0.80550933 0.03002507 0.131937354 1.13588824 0.014913993 0.009373226 5.12E-08 7.290465589 0.141609698 SASPDDDLGS(ph)SNWEAADLGNEERK ddPTM_A459_MK2206_30min_R1 1 SASPDDDLGSSNWEAADLGNEERK 24 1 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 S(0.006)AS(0.179)PDDDLGS(0.792)S(0.022)NWEAADLGNEERK 203.26 2.29E-31 98421000 2408.3 2474.7 2964.9 2413.7 2797.4 1978.7 1944.8 2645.9 1828.8 858.93 TRUE FALSE 2203.461439 2313.59658 2763.650849 2599.603592 2685.973634 2090.732284 1815.06594 2622.767175 2018.910304 965.340733 2.282573772 2.396663169 2.862876034 2.69293888 2.782409923 2.165797228 1.880233454 2.71693412 2.091396577 1 9.914894445 -10.66005387 0.319160726 0.157701396 2.595631967 0.702317832 0.289401822 9.519695839 0.725135929 7.296761526 0.300955627 2.19E-11 10.66005387 2.437930571 SASPDDDLGS(ph)SNWEAADLGNEERK ddPTM_A459_MK2206_30min_R2 2 SASPDDDLGSSNWEAADLGNEERK 24 1 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 S(0.005)AS(0.073)PDDDLGS(0.782)S(0.141)NWEAADLGNEERK;S(0.004)AS(0.026)PDDDLGS(0.926)S(0.044)NWEAADLGNEERK 140.56 2.13E-08 49140100 23365.7 50056 39887 47078 53673 40632 48610 30759 45235 36651 TRUE FALSE 25154.59596 47570.29183 41216.81267 43231.5768 51565.52833 42178.27923 42227.44861 34779.30691 49169.45853 35455.08087 0.70947789 1.341705918 1.16250793 1.219333753 1.454390374 1.189625808 1.191012616 0.980939997 1.386809939 1 15.11370477 -4.752815 24.99512457 1.218024673 0.709476928 0.523981636 0.144228366 259.2149289 751198.6003 0.034793258 0.398880354 1.77E-05 4.752815 -0.508547745 SASPEVS(ph)EGHENQHGQESEAK ddPTM_A459_MK2206_30min_R1 1 SASPEVSEGHENQHGQESEAK 21 0 O60930 O60930 RNASEH1 Ribonuclease H1 1 S(0.006)AS(0.071)PEVS(0.922)EGHENQHGQES(0.001)EAK 80.031 0.001368 3111100 787.42 597.94 725.96 649.38 1071.4 975.37 741.46 775.14 625.66 676.36 TRUE FALSE 720.4457941 559.0139973 676.6838578 699.3953601 1028.723869 1030.594607 691.9985563 768.3630327 690.6995959 760.1525831 0.947764712 0.73539709 0.890194775 0.920072332 1.353312338 1.35577334 0.910341649 1.010801055 0.908632834 1 9.570145225 -6.018892122 23.35438524 1.098494769 0.855477703 0.320023098 0.156239027 396.938914 490696.1088 0.050057325 0.065873327 9.57E-07 6.018892122 -0.243017067 SASPQPAFHLKPDT(ph)PVSVK ddPTM_A459_MK2206_30min_R1 1 SASPQPAFHLKPDTPVSVK 19 1 Q5VT82;B7ZM79;Q9HC56-2;Q9HC56 Q5VT82 PCDH9 Protocadherin-9 1 SASPQPAFHLKPDT(0.886)PVS(0.113)VK 56.039 0.031296 9312300 4026.7 4022.3 3310.5 3478.8 3548.3 3486.8 4085.6 4345.6 5286.4 4591 TRUE FALSE 3684.20802 3760.447539 3085.792484 3746.737779 3406.963697 3684.219603 3813.057079 4307.606877 5835.940198 5159.76774 0.714025942 0.728801707 0.598048718 0.726144658 0.660294003 0.714028187 0.738997814 0.834845112 1.131047073 1 12.33309041 -8.019776132 2.514230993 1.064862623 0.69327601 0.88807698 0.051586951 0.085011488 1.006541826 0.039754148 0.013606847 9.55E-09 8.019776132 -0.371586613 SASPS(ph)VPGPTKPKPK ddPTM_A459_MK2206_30min_R2 1 SASPSVPGPTKPKPK 15 2 Q03164-2;Q03164;Q03164-3;A0A3B3ITZ6 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.002)AS(0.044)PS(0.953)VPGPTKPKPK 79.393 0.03523 16738000 48260 62344 66677 63161 51169 48230 61929 52009 45575 67255 TRUE FALSE 51954.82271 59248.08762 68899.9779 58000.54426 49159.84796 50065.42645 53797.64791 58806.75487 49539.03112 65060.47486 0.798561997 0.910661777 1.059014372 0.891486642 0.755602354 0.769521381 0.826886801 0.903878353 0.761430519 1 15.98949373 -4.737211575 23.10331032 0.87005738 0.798561193 0.051716109 0.09628736 3213.191042 3063636.945 0.025565529 1.347532771 1.83E-05 4.737211575 -0.071496188 SASQDCIET(ph)TPGAQEGK ddPTM_A459_MK2206_30min_R2 1 SASQDCIETTPGAQEGK 17 0 Q99767-2;Q99767 Q99767-2 APBA2 Amyloid beta A4 precursor protein-binding family A member 2 1 S(0.001)AS(0.266)QDCIET(0.672)T(0.061)PGAQEGK 160.03 6.58E-05 6729900 54241 43889 49884 55117 47357 51120 86732 73158 56967 85111 TRUE FALSE 58393.73266 41709.53608 51547.10766 50613.76479 45497.52623 53065.40742 75343.98422 82720.00179 61921.88669 82333.83504 0.709231298 0.506590469 0.626074416 0.614738336 0.552598166 0.644515191 0.915103544 1.004690256 0.75208311 1 16.32919781 -7.226153227 4.281970792 0.920699577 0.599280207 0.777352361 0.081215104 0.092985718 3.958931543 0.031232634 0.022907433 5.94E-08 7.226153227 -0.321419371 SASQS(ph)S(ph)LDKLDQELK ddPTM_A459_MK2206_30min_R1 1 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 S(0.006)AS(0.081)QS(0.932)S(0.981)LDKLDQELK 84.753 0.042268 20017000 11642 15179 14774 11341 6907.1 6222.9 9118.9 9868.3 15009 14351 TRUE FALSE 10651.78677 14190.84434 13771.18204 12214.48579 6631.975581 6575.23522 8510.594819 9782.022494 16569.23926 16128.91022 0.660415776 0.879839006 0.853819747 0.757303848 0.411185597 0.407667668 0.527660871 0.606489983 1.027300607 1 13.97736134 -10.55555294 10.25331221 1 0.671735766 0.195423493 0.193124537 1.45E-10 0 0.205070322 0.049736859 2.78E-11 10.55555294 -0.328264234 SASQS(ph)S(ph)LDKLDQELK ddPTM_A459_MK2206_30min_R2 1 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 SAS(0.001)QS(0.999)S(1)LDKLDQELK 131.42 0.02447 5977200 102900 77799 87877 66480 69719 38222 84917 67010 46564 89886 TRUE FALSE 110778.1031 73935.61479 90806.77532 61048.37134 66981.48175 39676.56499 73767.2959 75768.43708 50614.05255 86953.02718 1.273999385 0.850293741 1.044319885 0.702084485 0.770317997 0.456298835 0.848357996 0.871372045 0.582084997 1 16.40794863 -1.522880333 0.71834471 0.741280218 73.95744408 0.452469862 0.164543446 280.1164371 1.379685269 0.062076202 33038.90823 0.02999989 1.522880333 73.21616386 SASQS(ph)SLDKLDQELK ddPTM_A459_MK2206_30min_R1 4 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SAS(0.004)QS(0.982)S(0.014)LDKLDQELK;SAS(0.004)QS(0.735)S(0.26)LDKLDQELK;S(0.003)AS(0.013)QS(0.578)S(0.406)LDKLDQELK;SAS(0.013)QS(0.493)S(0.493)LDKLDQELK 133.9 0.0023635 311933300 9037.3 12470.3 12022.1 11093.4 7897.1 7408.2 10530.9 9951 13312.4 13857.5 TRUE FALSE 8268.630178 11658.4812 11206.07335 11947.81559 7582.541785 7827.645882 9828.402876 9863.999456 14696.27162 15574.27172 0.530916009 0.748573122 0.71952471 0.767150837 0.48686333 0.502601086 0.631066611 0.633352213 0.943624966 1 13.92687708 -8.298098188 4.042204449 0.993498489 0.629225276 0.684809845 0.09371606 0.136472193 4.741430151 0.093680558 0.026076828 5.03E-09 8.298098188 -0.364273213 SASQS(ph)SLDKLDQELKEQQK ddPTM_A459_MK2206_30min_R2 1 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.004)AS(0.051)QS(0.472)S(0.472)LDKLDQELKEQQK 74 0.011605 19773000 11967 20389 18573 15985 24850 14398 23868 20140 23283 19240 TRUE FALSE 12883.20272 19376.51191 19192.21455 14678.97437 23874.26414 14945.92598 20734.10293 22772.36715 25308.11325 18612.20038 0.692191276 1.041065082 1.031163117 0.788674851 1.282721207 0.803017681 1.114006002 1.223518267 1.359759338 1 14.183961 -7.494470158 5.682359583 1.211174855 0.956587055 0.303561401 0.175426334 0.218897601 21.72946471 0.074525643 0.047290429 3.20E-08 7.494470158 -0.2545878 SASQSS(ph)LDKLDQELK ddPTM_A459_MK2206_30min_R1 1 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SAS(0.001)QS(0.163)S(0.836)LDKLDQELK 75.239 0.021478 299190000 4160.6 5205 6177.7 4948.5 2870.3 3236.2 3834.4 3617.6 5200.3 5308.7 TRUE FALSE 3806.719122 4866.153554 5758.374936 5329.634327 2755.969873 3419.430847 3578.614172 3585.971705 5740.889794 5966.381835 0.638028076 0.815595396 0.965136844 0.893277446 0.461916443 0.573116328 0.599796371 0.601029536 0.962206234 1 12.54264059 -11.11112861 7.768440608 1.000177957 0.718828717 0.196171701 0.167781574 0.000560143 2.97E-05 0.175968304 0.042652021 7.74E-12 11.11112861 -0.28134924 SASQSS(ph)LDKLDQELK ddPTM_A459_MK2206_30min_R2 3 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SASQS(0.02)S(0.98)LDKLDQELK;SAS(0.001)QS(0.118)S(0.882)LDKLDQELK;SAS(0.005)QS(0.418)S(0.576)LDKLDQELK 285.79 2.62E-55 207351000 314563 283917 338911 304423 315321 184479 436184 328520 272050 423482 TRUE FALSE 338646.1851 269818.0946 350210.1236 279550.6671 302939.9132 191499.4776 378912.5168 371458.692 295712.4172 409663.817 0.826644119 0.658632965 0.854871993 0.682390427 0.739484183 0.46745519 0.924935279 0.906740299 0.721841678 1 18.64408095 -8.634026227 0.648005181 0.991655079 0.723913654 0.258792285 0.127751637 1.291049248 1.208556955 0.133433348 0.053371475 2.32E-09 8.634026227 -0.267741425 SASQSS(ph)LDKLDQELKEQQK ddPTM_A459_MK2206_30min_R1 2 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SASQS(0.048)S(0.952)LDKLDQELKEQQK;SASQS(0.24)S(0.759)LDKLDQELKEQQK 161.59 1.51E-06 80357000 4174.2 4319 5277.4 5639.2 3254.9 2998.8 3171.2 5255.6 3633.2 1976.64 TRUE FALSE 3819.16237 4037.832315 4919.184792 6073.532161 3125.250441 3168.589464 2959.655034 5209.650843 4010.884142 2221.521086 1.719165483 1.817598014 2.214331803 2.733952065 1.406806562 1.426315278 1.33226511 2.34508278 1.805467509 1 11.11733212 -6.306061019 24.99986052 1.602573708 2.106220785 0.304404745 0.416760058 670.614118 375718.6019 0.1368053 0.155123176 4.94E-07 6.306061019 0.503647078 SASQSS(ph)LDKLDQELKEQQK ddPTM_A459_MK2206_30min_R2 1 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.001)AS(0.021)QS(0.357)S(0.62)LDKLDQELKEQQK 103.24 0.00115 23188000 16020 33055 27579 26591 32253 22109 37272 23536 31966 35690 TRUE FALSE 17246.50352 31413.53677 28498.4701 24418.43024 30986.58516 22950.37349 32378.14163 26612.23601 34746.3449 34525.43822 0.499530329 0.909866417 0.825433986 0.707259096 0.897500126 0.664738079 0.937805378 0.770800818 1.006398374 1 15.07537211 -2.396431403 0.08177922 1.179546342 1.03E-13 0.366907284 0.122501075 190.4578043 1.354296705 3.371699528 25.700187 0.004013919 2.396431403 -1.179546342 SASS(ph)DTSEELNSQDSPPK ddPTM_A459_MK2206_30min_R1 1 SASSDTSEELNSQDSPPK 18 0 J3QRP6;O14745;O14745-2 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 SAS(0.317)S(0.647)DT(0.028)S(0.008)EELNSQDSPPK 380.03 6.30E-256 34664000 2538.8 2486.6 2044.5 1632.3 1999.5 2052.7 2231.8 1761.3 2802.5 3117.8 TRUE FALSE 2322.861728 2324.721888 1905.725036 1758.020029 1919.855681 2168.9221 2082.920694 1745.90114 3093.829904 3504.056602 0.662906452 0.663437311 0.543862515 0.50170994 0.547895168 0.618974619 0.594431235 0.498251409 0.882928062 1 11.77481036 -8.402205635 4.110757954 0.994581849 0.579398872 0.869263653 0.056922545 0.07494815 1.996529738 0.058904463 0.015488815 3.96E-09 8.402205635 -0.415182977 SASS(ph)DTSEELNSQDSPPK ddPTM_A459_MK2206_30min_R2 2 SASSDTSEELNSQDSPPK 18 0 J3QRP6;O14745;O14745-2 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 SAS(0.219)S(0.748)DT(0.034)SEELNSQDSPPK;S(0.006)AS(0.272)S(0.714)DT(0.007)SEELNSQDSPPK 335.14 1.11E-144 159813000 307170 210454 246030 243810 195264 175342 271320 235900 158219 265920 TRUE FALSE 330687.1714 200003.1604 254232.5174 223889.9431 187596.9542 182014.7627 235695.3581 266732.94 171980.6026 257243.0522 1.285504773 0.777487122 0.988296925 0.870343985 0.729259557 0.70755949 0.91623605 1.036890745 0.668552955 1 17.97277259 -4.755197139 24.99157875 0.854139594 1.285505489 0.519684677 0.124172777 170.413963 682207.9605 0.030769254 0.279394517 1.76E-05 4.755197139 0.431365896 SASS(ph)GAEGDVSSER ddPTM_A459_MK2206_30min_R1 1 SASSGAEGDVSSER 14 0 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 SAS(0.027)S(0.973)GAEGDVSSER 247.93 2.47E-27 14659000 2599.9 2834.5 2780.2 2209.6 2588.6 2398.7 3151.8 2381.8 3019.5 4072.2 TRUE FALSE 2378.764852 2649.973535 2591.48777 2379.783775 2485.490581 2534.512321 2941.549173 2360.976174 3333.38783 4576.69488 0.51975605 0.579014683 0.566235643 0.519978683 0.543075439 0.553786605 0.642723461 0.515869254 0.728339537 1 12.1600904 -8.591421898 2.771000999 0.999743881 0.557621087 0.933533037 0.036671387 0.073953289 1.373202969 0.034856874 0.009346588 2.56E-09 8.591421898 -0.442122793 SASS(ph)SWLEGTSTQAK ddPTM_A459_MK2206_30min_R1 2 SASSSWLEGTSTQAK 15 0 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 SAS(0.332)S(0.662)S(0.006)WLEGTSTQAK;SAS(0.179)S(0.814)S(0.007)WLEGTSTQAK 272.72 3.91E-45 30210000 4288.3 4373.5 4678.5 3805.3 4075.8 3881.6 4571.8 4315.5 4219.4 3069.8 TRUE FALSE 3923.557566 4088.784355 4360.936455 4098.384865 3913.452255 4101.372838 4266.823564 4277.770038 4658.021729 3450.11 1.137226803 1.185117099 1.263999251 1.187899767 1.134297821 1.188765818 1.236721022 1.239893812 1.350108179 1 11.75242664 -7.217012513 7.479833799 1.226647943 1.184585128 0 0.08831354 0.951647235 141.7145114 0.03264408 0.025069894 6.07E-08 7.217012513 -0.042062815 SASSASSLFS(ph)PSSTLFSSSR ddPTM_A459_MK2206_30min_R1 1 SASSASSLFSPSSTLFSSSR 20 0 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 SASSASS(0.026)LFS(0.974)PSSTLFSSSR 243.61 1.88E-30 22839000 3633.7 2921.1 2672 2591.1 3135.1 2987.5 3170.6 2918.2 2483.1 2711.6 TRUE FALSE 3324.634734 2730.935859 2490.632085 2790.666971 3010.222328 3156.649668 2959.095059 2892.686485 2741.227131 3047.53348 1.090926402 0.896113489 0.817261599 0.91571331 0.987756935 1.035804755 0.970980329 0.949189403 0.899490407 1 11.57342635 -6.254802604 23.31560757 0.974281999 0.919529957 0.075369931 0.071596661 508.2472118 1785513.487 0.022362071 0.028123873 5.56E-07 6.254802604 -0.054752042 SASSASSLFS(ph)PSSTLFSSSR ddPTM_A459_MK2206_30min_R2 2 SASSASSLFSPSSTLFSSSR 20 0 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 SASSASS(0.017)LFS(0.96)PS(0.011)S(0.011)TLFSSSR;SASSASS(0.003)LFS(0.994)PS(0.003)STLFSSSR 207.81 1.13E-16 26804000 52820 57908 54063 62830 59477 61781 61445 44877 51001 58003 TRUE FALSE 56863.93981 55032.37293 55865.43344 57696.58802 57141.63413 64132.11925 53377.19769 50742.57799 55436.97479 56110.36686 1.013430191 0.980787972 0.995634792 1.028269663 1.018379264 1.14296382 0.951289408 0.904335167 0.987998794 1 15.77597973 SASSDT(ph)SEELNSQDSPPK ddPTM_A459_MK2206_30min_R2 1 SASSDTSEELNSQDSPPK 18 0 J3QRP6;O14745;O14745-2 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 SAS(0.014)S(0.127)DT(0.43)S(0.43)EELNSQDSPPK 233.57 7.86E-19 7926700 121500 91292 86502 98954 72169 66225 105120 85525 57914 99650 TRUE FALSE 130802.1334 86758.57203 89385.93351 90869.14166 69335.28244 68745.23878 91317.61773 96703.41115 62951.25504 96398.42866 1.356890722 0.899999857 0.927255089 0.942641316 0.719257393 0.713136508 0.947293633 1.00316377 0.653031962 1 16.55672201 SASSEEASES(ph)PTAR ddPTM_A459_MK2206_30min_R1 2 SASSEEASESPTAR 14 0 A0A075B6Q3;Q5H9F3-3 A0A075B6Q3 BCORL1 1 SASSEEAS(0.001)ES(0.98)PT(0.02)AR;SASSEEAS(0.001)ES(0.999)PT(0.001)AR 276.32 1.39E-45 8596800 3125.7 2744.8 2734.24 2034.84 2877 2671.7 2660.9 2319.74 2047.69 2354.98 TRUE FALSE 2859.842801 2566.113021 2548.647407 2191.563729 2762.402998 2822.969345 2483.396216 2299.458758 2260.554703 2646.732702 1.08051818 0.969539924 0.96294099 0.82802609 1.043703052 1.066586491 0.938287502 0.868791456 0.854092558 1 11.36999679 -7.519858552 22.65289339 0.89757302 0.985959507 0.198202834 0.075979606 60.59653281 454546.6742 0.036300546 0.021558061 3.02E-08 7.519858552 0.088386487 SASSEEASES(ph)PTAR ddPTM_A459_MK2206_30min_R2 1 SASSEEASESPTAR 14 0 A0A075B6Q3;Q5H9F3-3 A0A075B6Q3 BCORL1 1 SASSEEAS(0.019)ES(0.722)PT(0.259)AR 160.65 0.00028911 8579500 9826 11326 10770 11923 14877 15603 12671 12630 9605.6 13277 TRUE FALSE 10578.28611 10763.56731 11129.06642 10948.85276 14292.85423 16196.7831 11007.28248 14280.78437 10441.07773 12843.77258 0.82361207 0.838037831 0.866495133 0.852463923 1.112823677 1.261061188 0.857013188 1.111883933 0.812929197 1 13.6487814 -6.243070605 22.7170487 1.034854579 0.84616847 0.347664388 0.120955826 285.3753952 352928.0641 0.035727019 0.04599317 5.71E-07 6.243070605 -0.188686109 SASSGAEGDVSS(ph)EREP ddPTM_A459_MK2206_30min_R1 2 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 SASSGAEGDVS(0.019)S(0.981)EREP;SASSGAEGDVS(0.033)S(0.967)EREP 270.21 8.51E-50 84437000 11605.1 11727 11223.9 10723.5 13267 11186.1 12643.2 10802.7 10450.4 9426 TRUE FALSE 10618.0253 10963.57017 10462.05294 11549.42583 12738.5473 11819.44732 11799.7952 10708.25313 11536.75648 10593.76404 1.002290146 1.034907907 0.98756711 1.090209842 1.202457148 1.115698563 1.113843498 1.010807215 1.089013917 1 13.37092766 -5.790511727 10.93535015 1.096247076 1.01093373 0.307530945 0.054603983 0.619055293 229.6421496 0.01608537 0.024065289 1.62E-06 5.790511727 -0.085313346 SASSGAEGDVSS(ph)EREP ddPTM_A459_MK2206_30min_R2 1 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 SASSGAEGDVS(0.03)S(0.97)EREP 200 3.62E-06 61516000 114770 132680 127750 161140 143140 132420 142090 112530 129530 132170 TRUE FALSE 123556.8794 126091.3041 132009.1212 147974.3465 137519.6044 137459.3359 123433.4123 127238.0574 140796.2853 127857.3037 0.966365439 0.98618773 1.032472275 1.157339802 1.075570971 1.075099598 0.965399776 0.995156739 1.101198611 1 16.96417505 -5.284296009 3.877449938 1.053453014 0.973670551 0.24185098 0.053218848 0.320038561 10.87017467 0.015253645 0.038519018 5.20E-06 5.284296009 -0.079782463 SASSS(ph)AAGSPGGLTSLQQQK ddPTM_A459_MK2206_30min_R2 1 SASSSAAGSPGGLTSLQQQK 20 0 E5RJ10;E5RHB8;E5RJX6;E5RG91;Q8NEZ2-3;Q8NEZ2-2;Q8NEZ2 E5RJ10 VPS37A Vacuolar protein sorting-associated protein 37A 1 SASS(0.004)S(0.96)AAGS(0.036)PGGLTSLQQQK 252.51 1.12E-82 0 9967.2 10896 7009.2 9867.5 10817 9184.2 10110 7540.6 8581.5 10971 TRUE FALSE 10730.2965 10354.92048 7242.88323 9061.293685 10392.27023 9533.711167 8782.544856 8526.182311 9327.903358 10613.01717 1.011050517 0.975681121 0.682452795 0.853790542 0.97920036 0.898303566 0.827525737 0.803370255 0.878911549 1 13.37354724 -7.209156838 23.71645895 0.861065933 0.895116455 7.19E-05 0.099005139 1004.805234 455799.8329 0.039791542 0.030822369 6.18E-08 7.209156838 0.034050521 SASSSAAGS(ph)PGGLTSLQQQK ddPTM_A459_MK2206_30min_R2 2 SASSSAAGSPGGLTSLQQQK 20 0 E5RJ10;E5RHB8;E5RJX6;E5RG91;Q8NEZ2-3;Q8NEZ2-2;Q8NEZ2 E5RJ10 VPS37A Vacuolar protein sorting-associated protein 37A 1 SASS(0.001)S(0.006)AAGS(0.991)PGGLT(0.001)SLQQQK;SASSSAAGS(0.999)PGGLTSLQQQK 138.28 8.64E-05 12563700 43268 46189 42056 48800 43425 43604 54759 38981 37739 51453 TRUE FALSE 46580.63135 43895.32143 43458.12605 44812.8839 41719.91631 45263.38077 47569.07752 44075.95054 41021.47 49774.09282 0.93584089 0.881890938 0.873107345 0.900325478 0.838185368 0.909376308 0.955699538 0.885519917 0.824153042 1 15.6031074 -6.946025848 24.9996054 0.910480363 0.884546766 0.079289884 0.048271438 294.1373505 136236.1653 0.016897726 0.014902391 1.13E-07 6.946025848 -0.025933597 SAST(ph)EKLEQGTSALIR ddPTM_A459_MK2206_30min_R2 1 SASTEKLEQGTSALIR 16 1 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 SAS(0.137)T(0.862)EKLEQGTSALIR 130.95 0.0077101 4721100 21147 30758 21844 32792 33081 29158 34309 25533 28347 28750 TRUE FALSE 22766.03058 29230.60245 22572.26806 30112.7887 31782.07372 30267.62812 29804.18709 28870.25077 30812.57082 27811.88985 0.818571866 1.05101101 0.811604971 1.082730762 1.142751316 1.088298144 1.07163473 1.038054261 1.10789202 1 14.76341416 -5.78340591 24.98612226 1.080617644 0.909457472 0.57461672 0.0713668 157.7378331 179420.4333 0.018898108 0.028056589 1.65E-06 5.78340591 -0.171160172 SAST(ph)LCLPSVGAAR ddPTM_A459_MK2206_30min_R2 2 SASTLCLPSVGAAR 14 0 Q8IUC4-2;Q8IUC4;A8MT19 Q8IUC4-2 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 S(0.016)AS(0.335)T(0.649)LCLPSVGAAR;S(0.052)AS(0.287)T(0.661)LCLPSVGAAR 130.19 0.0025332 0 42172 35305 30097 32097 25950 21304.5 28802 30295 23088.1 36069 TRUE FALSE 45400.72074 33551.80504 31100.41896 29474.57243 24931.07261 22115.25768 25020.2628 34254.66052 25096.2612 34892.07148 1.301175849 0.961588224 0.891331974 0.844735528 0.714519705 0.633818995 0.717075878 0.981731925 0.719253978 1 15.09061163 -4.188591597 1.015080105 0.787463622 2.416030976 0.637339533 0.112731084 3.396203914 1.215188982 0.036585052 8.039319321 6.48E-05 4.188591597 1.628567354 SASVNKEPVS(ph)LPGIMR ddPTM_A459_MK2206_30min_R1 1 SASVNKEPVSLPGIMR 16 1 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 SAS(0.016)VNKEPVS(0.984)LPGIMR 137.93 0.0019272 17943000 1747.6 1764.4 1868.4 1564.7 1847.3 1450.8 1560.7 2121.3 2148.9 1913.4 TRUE FALSE 1598.957443 1649.537239 1741.578214 1685.213465 1773.718129 1532.943042 1456.588551 2102.753698 2372.285845 2150.446437 0.743546742 0.767067345 0.809868213 0.783657494 0.824813908 0.712848744 0.6773424 0.977821936 1.103159699 1 11.07042048 -7.896241372 5.174701311 1.04802206 0.764399258 0.870283123 0.047700538 0.06958111 2.88276183 0.028471628 0.01323375 1.27E-08 7.896241372 -0.283622802 SASVS(ph)SISLTK ddPTM_A459_MK2206_30min_R1 1 SASVSSISLTK 11 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 SAS(0.058)VS(0.94)S(0.002)ISLTK 223.08 6.47E-06 15028000 5659 4982.6 5803 4351.9 4743.6 3584.1 3688.5 3860.8 3301.6 3152.2 TRUE FALSE 5177.672333 4658.231834 5409.108528 4687.084092 4554.652367 3787.028645 3442.446895 3827.045433 3644.813135 3542.718334 1.461497033 1.314875018 1.526824325 1.32301912 1.285637733 1.068961257 0.971696469 1.080256761 1.02881821 1 11.79064105 -6.606222623 1.792283414 1.021308129 1.415007528 0.894980598 0.061778305 0.102187935 0.671678245 0.023505136 0.0240934 2.48E-07 6.606222623 0.393699399 SASVVSSDSISTSADNFS(ph)PDLR ddPTM_A459_MK2206_30min_R2 1 SASVVSSDSISTSADNFSPDLR 22 0 Q13614 Q13614 MTMR2 Myotubularin-related protein 2 1 SASVVSSDSISTSADNFS(1)PDLR 256.66 7.94E-54 7890200 22011 19696 24144 23896 22959 24278 27555 21068 20063 22303 TRUE FALSE 23696.17908 18717.92528 24948.94891 21943.62036 22057.5143 25201.9163 23936.9954 23821.65994 21808.04347 21575.25494 1.09830355 0.867564501 1.156368672 1.017073514 1.022352429 1.168093558 1.10946524 1.104119511 1.010789608 1 14.39708999 -5.275732493 24.99931901 1.078067562 0.982934003 0.177810619 0.077437618 1084.745503 1897271.055 0.019408414 0.04068206 5.30E-06 5.275732493 -0.095133559 SAT(ph)ASPQQPQAQQR ddPTM_A459_MK2206_30min_R1 2 SATASPQQPQAQQR 14 0 Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-5;Q9BX66-12;A0A0U1RQI5 Q9BX66-4 SORBS1 Sorbin and SH3 domain-containing protein 1 1 S(0.075)AT(0.463)AS(0.463)PQQPQAQQR;SAT(0.622)AS(0.378)PQQPQAQQR 188.19 0.00021425 2741600 587.29 852.01 838.58 791.99 999.88 800.92 779.32 1103.25 764.16 782.64 TRUE FALSE 537.3379015 796.5439941 781.659526 852.989207 960.0526623 846.2673983 727.3329847 1093.604402 843.5971666 879.5993518 0.610889379 0.905575922 0.88865405 0.969747426 1.091465859 0.962105527 0.826891224 1.243298326 0.959069791 1 9.780702731 -4.271281394 0.9274173 1.012115588 1.24E-12 0.551926546 0.104746108 3.710923395 1.307238972 0.035000247 4.744569246 5.35E-05 4.271281394 -1.012115588 SAT(ph)FPNAGPR ddPTM_A459_MK2206_30min_R2 2 SATFPNAGPR 10 0 Q86X27;Q86X27-3 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 S(0.002)AT(0.998)FPNAGPR;S(0.041)AT(0.959)FPNAGPR 120.86 0.011595 57925000 63727 83774 71938 69756 63649 62372 79245 70638 72260 53256 TRUE FALSE 68605.98812 79613.90498 74336.37702 64056.71166 61149.82045 64745.61017 68840.03631 79870.62914 78545.04418 51518.26108 1.331682915 1.54535311 1.442913162 1.243378762 1.186954279 1.25675069 1.33622593 1.550336278 1.524605888 1 15.65279628 -11.64996804 2.632997394 0.185434363 1.376956331 0.453006181 0.125168115 77446775.37 63846737.39 367261322.7 0.036423477 2.24E-12 11.64996804 1.191521968 SAT(ph)PEPVTDNR ddPTM_A459_MK2206_30min_R1 1 SATPEPVTDNR 11 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.004)AT(0.99)PEPVT(0.006)DNR 105.13 0.027759 7124800 2098.5 2398.6 2108.7 2022.1 2339.8 2299.7 3068.3 1792.3 2167.3 3085.9 TRUE FALSE 1920.011555 2242.450704 1965.567319 2177.842492 2246.600811 2429.907027 2863.619305 1776.63011 2392.598591 3468.204589 0.553603891 0.646573939 0.566739149 0.62794522 0.647770555 0.7006239 0.825677734 0.512262199 0.689866624 1 11.75997329 -14.52287875 0.219839687 2.793946132 0.598243587 0.650676942 0.08057761 99.69132756 0.994768326 79.29356669 0.158791859 3.00E-15 14.52287875 -2.195702545 SAT(ph)PEPVTDNR ddPTM_A459_MK2206_30min_R2 1 SATPEPVTDNR 11 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.002)AT(0.997)PEPVT(0.001)DNR 163.45 0.0014929 15120000 96512 74201 61205 79692 65780 51624 76746 55564 37092 68075 TRUE FALSE 103901.0329 70516.28624 63245.54415 73180.90868 63197.14668 53588.58749 66669.15801 62826.40558 40318.19511 65853.71833 1.577754993 1.070801893 0.960394428 1.111264641 0.959659504 0.813751886 1.012382591 0.954029737 0.612238703 1 16.00697728 -1.718507704 0.886689352 0.91120777 200 0.708015939 0.125704491 308.4312925 1.077747533 0.042546856 123662.1411 0.019120194 1.718507704 199.0887922 SAT(ph)PTPTVIAR ddPTM_A459_MK2206_30min_R1 1 SATPTPTVIAR 11 0 Q92618;A0A087WUJ4 Q92618 ZNF516 Zinc finger protein 516 1 S(0.001)AT(0.989)PT(0.009)PTVIAR 105.13 0.027759 6787400 1975 1879.7 1849.8 1224.7 2443.3 2058.3 2520.3 2672.5 1532.5 1534.5 TRUE FALSE 1807.015879 1757.331188 1724.24073 1319.026606 2345.978187 2174.839167 2352.175386 2649.134614 1691.808859 1724.605445 1.047785094 1.018975786 0.999788523 0.764828042 1.360298493 1.261064769 1.363891893 1.536081555 0.980983137 1 10.75205062 -6.275674297 24.9880469 1.283399897 0.965206896 0.39870644 0.173080475 724.7309572 1272193.636 0.052083261 0.059333433 5.30E-07 6.275674297 -0.318193001 SAT(ph)PVNCEQPDILVSSTPINEGQTVLDK ddPTM_A459_MK2206_30min_R1 2 SATPVNCEQPDILVSSTPINEGQTVLDK 28 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 S(0.225)AT(0.775)PVNCEQPDILVSSTPINEGQTVLDK;S(0.202)AT(0.798)PVNCEQPDILVSSTPINEGQTVLDK 207.35 4.16E-42 13310800 2838.1 3122.3 3318.9 2471.1 2720.5 2770.2 2729.3 2826.9 2946.9 2625.3 TRUE FALSE 2596.704692 2919.037702 3093.622315 2661.42455 2612.136724 2927.04633 2547.233377 2802.184711 3253.240801 2950.541984 0.880077188 0.989322544 1.048492898 0.902012093 0.885307424 0.992036835 0.863310331 0.949718637 1.10259092 1 11.52676427 -8.181521098 7.427031568 1.050663487 0.940025067 0.359407526 0.060116598 0.281110215 22.7171887 0.041652934 0.015533885 6.58E-09 8.181521098 -0.11063842 SAT(ph)PVNCEQPDILVSSTPINEGQTVLDK ddPTM_A459_MK2206_30min_R2 2 SATPVNCEQPDILVSSTPINEGQTVLDK 28 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 S(0.222)AT(0.778)PVNCEQPDILVSSTPINEGQTVLDK;S(0.224)AT(0.776)PVNCEQPDILVSSTPINEGQTVLDK 150 4.47E-14 16653000 15824.7 22932.2 19879.4 22331.9 23849.4 21134.6 24113 17064 16886 25173.1 TRUE FALSE 17036.2512 21793.42029 20542.16927 20507.31233 22912.95272 21938.89201 20946.93414 19294.32339 18354.71376 24351.70381 0.699591755 0.894944373 0.843561889 0.842130493 0.940917847 0.900918153 0.860183513 0.792319237 0.753734273 1 14.5717351 -4.754966916 24.99510126 0.864567517 0.699591478 0.365362356 0.066994894 255.4009939 986206.1995 0.016815847 0.155421777 1.76E-05 4.754966916 -0.164976039 SAT(ph)TTGSPGTEK ddPTM_A459_MK2206_30min_R1 1 SATTTGSPGTEK 12 0 A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 S(0.007)AT(0.395)T(0.248)T(0.248)GS(0.102)PGTEK 126.5 0.0063754 38032000 8990 7370.1 7041.8 6518.9 4175.3 3829.5 8118.3 6916.3 959.66 5474.4 TRUE FALSE 8225.353292 6890.30515 6563.822236 7020.986808 4008.98896 4046.322981 7576.74302 6855.831518 1059.420091 6152.610002 1.336888457 1.119899546 1.066835414 1.141139582 0.651591594 0.657659592 1.231468112 1.114296456 0.172190354 1 12.58698283 -6.207005904 10.38789946 0.824320425 1.156154708 0.278583266 0.283862872 1.107543153 208.098534 0.085225125 0.110008149 6.21E-07 6.207005904 0.331834283 SATDGNT(ph)STTPPTSAK ddPTM_A459_MK2206_30min_R2 1 SATDGNTSTTPPTSAK 16 0 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 SATDGNT(0.434)S(0.224)T(0.224)T(0.118)PPTSAK 142.45 0.0009222 49483000 118610 128390 126770 124410 133670 105980 159040 107210 105970 137780 TRUE FALSE 127690.8728 122014.3393 130996.4485 114245.305 128421.4442 110013.1432 138157.857 121222.7151 115187.0791 133284.2499 0.958034223 0.915444544 0.982835171 0.857155329 0.963515526 0.825402426 1.036565514 0.909505176 0.864221235 1 17.02414678 SATDGNTS(ph)TTPPTSAK ddPTM_A459_MK2206_30min_R1 1 SATDGNTSTTPPTSAK 16 0 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 SATDGNT(0.111)S(0.471)T(0.209)T(0.209)PPT(0.001)SAK 177.04 1.18E-06 32849000 3686.8 3333.4 3150 3198 3089.3 3231.4 3194.8 2731.5 2550.3 3083.4 TRUE FALSE 3373.2183 3116.395054 2936.186776 3444.310514 2966.246639 3414.359075 2981.680721 2707.618783 2815.412811 3465.39487 0.973400846 0.899290029 0.847287794 0.993915742 0.855962091 0.985272733 0.860415864 0.781330522 0.812436365 1 11.75880404 -7.500937095 23.94767181 0.842304708 0.921147177 0.129536426 0.071970557 675.3911324 737142.2506 0.028733405 0.019162357 3.16E-08 7.500937095 0.078842469 SATDGNTS(ph)TTPPTSAK ddPTM_A459_MK2206_30min_R2 1 SATDGNTSTTPPTSAK 16 0 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 SAT(0.001)DGNT(0.106)S(0.346)T(0.346)T(0.2)PPTSAK 80.102 0.023652 69229000 46657 45150 40019 50696 53564 43421 56743 41067 38491 50692 TRUE FALSE 50229.09579 42907.91665 41353.21349 46553.97463 51460.80822 45073.41658 49292.57594 46434.5979 41838.8776 49037.92419 1.024290824 0.874994555 0.843290457 0.949346356 1.049408373 0.919154253 1.005192955 0.94691198 0.853194304 1 15.58161029 -5.980935009 24.84756316 0.963254533 0.907946557 0.093758659 0.066074917 487.2503054 635032.2662 0.01869574 0.027725595 1.04E-06 5.980935009 -0.055307977 SATDGNTST(ph)TPPTSAK ddPTM_A459_MK2206_30min_R2 1 SATDGNTSTTPPTSAK 16 0 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 SATDGNT(0.112)S(0.155)T(0.514)T(0.219)PPTSAK 163.34 7.64E-05 56573000 118210 138450 138030 129370 137750 121300 146950 115690 116110 149500 TRUE FALSE 127260.2485 131574.7743 142631.8513 118800.0572 132341.2429 125916.1565 127655.2885 130811.0802 126209.0379 144621.8272 0.879951878 0.909785036 0.986240141 0.821453161 0.915084848 0.870658039 0.882683416 0.904504408 0.872683193 1 17.14192578 -10.88773397 5.794447497 1.000021986 0.894692394 0.389878587 0.039885391 1.11E-05 1.21E-06 0.037709716 0.009144041 1.29E-11 10.88773397 -0.105329592 SATDGNTSTT(ph)PPTSAK ddPTM_A459_MK2206_30min_R1 3 SATDGNTSTTPPTSAK 16 0 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 SATDGNT(0.015)S(0.02)T(0.22)T(0.735)PPT(0.005)S(0.005)AK;SATDGNTS(0.002)T(0.026)T(0.972)PPTSAK;SATDGNT(0.003)S(0.161)T(0.034)T(0.803)PPTSAK 218.83 2.46E-10 158107000 25975.1 26170.2 27189.5 24357 24474.6 21250.6 24266.6 22306.3 21625.2 21310.8 TRUE FALSE 23765.78134 24466.51522 25343.95249 26232.98036 23499.72486 22453.79061 22647.81939 22111.27837 23873.21693 23950.94279 0.992269137 1.021526185 1.058160955 1.095279655 0.981160744 0.937490887 0.945591979 0.923190313 0.996754789 1 14.54779483 -6.47273701 7.266557527 0.955273595 1.041422825 0.568910142 0.033402082 0.1849371 23.1990921 0.010741415 0.012062902 3.37E-07 6.47273701 0.086149229 SATDGNTSTT(ph)PPTSAK ddPTM_A459_MK2206_30min_R2 3 SATDGNTSTTPPTSAK 16 0 A0A669KAX4;Q13620-1;A0A669KAU9;K4DI93;Q13620 A0A669KAX4 CUL4B Cullin-4B 1 SATDGNT(0.011)S(0.036)T(0.036)T(0.916)PPT(0.001)SAK;SATDGNT(0.004)S(0.027)T(0.085)T(0.882)PPT(0.001)SAK;SATDGNT(0.034)S(0.248)T(0.17)T(0.547)PPT(0.001)SAK 151.49 0.00046657 71958400 137010 142269 133623 136475 139805 125179 158082 118944 108008 131548 TRUE FALSE 147499.5909 135204.1283 138077.9241 125324.5559 134315.5532 129942.7746 137325.6435 134490.3892 117402.3406 127255.5995 1.159081341 1.062461132 1.085043995 0.984825472 1.055478531 1.02111636 1.079132423 1.056852427 0.922571117 1 16.95736961 -1.522878748 0.663638449 1.021869925 13.95920059 0.471565744 0.044508701 220.9523292 1.353739779 0.018114492 4212.17446 0.03 1.522878748 12.93733067 SATLS(ph)STESTASEMQEEMK ddPTM_A459_MK2206_30min_R1 1 SATLSSTESTASEMQEEMK 19 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SATLS(0.618)S(0.351)T(0.03)ESTASEMQEEMK 278.19 7.45E-131 0 1954 2519.2 2591.7 2269 2128.5 2105.2 2155.6 2322.7 2407.7 2620.8 TRUE FALSE 1787.802039 2355.199622 2415.782625 2443.758773 2043.717338 2224.394605 2011.803857 2302.392879 2657.989031 2945.48449 0.606963657 0.799596681 0.820164775 0.829662754 0.693847598 0.755188022 0.683012884 0.781668648 0.902394509 1 11.52428924 -8.396739121 2.358856002 0.996691796 0.747707204 0.63310363 0.064873446 0.184548137 2.061511057 0.063101169 0.017500364 4.01E-09 8.396739121 -0.248984592 SATLS(ph)STESTASEMQEEMK ddPTM_A459_MK2206_30min_R2 1 SATLSSTESTASEMQEEMK 19 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 S(0.005)AT(0.025)LS(0.711)S(0.193)T(0.042)ES(0.011)T(0.011)AS(0.001)EMQEEMK 82.877 0.020325 0 3225.9 4894.4 2118.6 3901.4 3826.1 3630.6 2860.3 3425.3 3409 4057.6 TRUE FALSE 3472.877384 4651.351213 2189.233067 3582.64314 3675.868089 3768.765027 2484.739174 3872.998471 3705.508658 3925.200844 0.884764251 1.184996997 0.557737847 0.912728618 0.936478982 0.96014578 0.633022175 0.986700713 0.944030332 1 11.93855076 SATLSGS(ph)ATNLASLTAALAK ddPTM_A459_MK2206_30min_R2 1 SATLSGSATNLASLTAALAK 20 0 Q9NQT8;H0YBA8;Q9NQT8-2 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 SAT(0.002)LS(0.142)GS(0.766)AT(0.024)NLAS(0.064)LT(0.001)AALAK 94.973 0.0010825 5315100 7354.3 10573 9392.7 6271.7 8313 10514 9233 7245.3 6812.9 8623.9 TRUE FALSE 7917.350862 10047.96019 9705.84793 5759.282048 7986.589851 10914.11764 8020.696009 8192.285587 7405.473727 8342.502849 0.949037837 1.204429939 1.16342159 0.69035422 0.957337384 1.308254589 0.961425624 0.981993742 0.887680096 1 13.02626456 -7.477425774 24.98325906 0.955243068 1.045988717 0.066635951 0.160840123 1384.957983 761244.4349 0.071548202 0.048235763 3.33E-08 7.477425774 0.090745649 SATRPSPS(ph)PER ddPTM_A459_MK2206_30min_R1 1 SATRPSPSPER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SATRPS(0.002)PS(0.998)PER 121.56 0.020916 44842000 4820.7 4660.5 4525.7 4275.4 4836.9 4460.8 4670.3 3961.6 3363.8 3029.6 TRUE FALSE 4410.67415 4357.100603 4218.508093 4604.692049 4644.236031 4713.366641 4358.752808 3926.964149 3713.479047 3404.92972 1.29537891 1.279644798 1.238941312 1.35236038 1.363974123 1.384277218 1.280130037 1.15331724 1.090618413 1 11.73340931 -8.02017977 1.64242675 1.022773629 1.318747845 0.868154279 0.043320782 0.14631985 0.707164738 0.04362132 0.014350503 9.55E-09 8.02017977 0.295974216 SATRPSPS(ph)PER ddPTM_A459_MK2206_30min_R2 1 SATRPSPSPER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SAT(0.008)RPS(0.019)PS(0.973)PER 111.88 0.03795 37440000 24512 26960 26105 31107 28226 28122 28646 22798 25418 25247 TRUE FALSE 26388.65757 25621.2056 26975.32767 28565.45859 27117.70542 29192.20242 24884.74579 25777.77688 27628.81169 24423.19246 1.080475356 1.049052275 1.104496381 1.169603795 1.110325993 1.195265626 1.018898157 1.055463037 1.13125308 1 14.57596417 -12.47989447 16.50808842 1.005302423 1.095767144 0 0.060016611 0 0 0 0.013775132 3.31E-13 12.47989447 0.090464721 SATT(ph)TGSPGTEK ddPTM_A459_MK2206_30min_R2 3 SATTTGSPGTEK 12 0 A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 S(0.002)AT(0.102)T(0.874)T(0.016)GS(0.007)PGTEK;SAT(0.172)T(0.772)T(0.052)GS(0.004)PGTEK;S(0.001)AT(0.003)T(0.706)T(0.168)GS(0.122)PGTEK 227.06 2.05E-09 111764800 154175 168056 156531 153005 149200 118864 172541 135738 135619 165856 TRUE FALSE 165978.7565 159710.5834 161749.6654 140504.0021 143341.6583 123387.4528 149886.1594 153479.4227 147414.8955 160444.1323 1.034495648 0.995428011 1.008136995 0.875719168 0.893405426 0.769036867 0.934195332 0.95659106 0.918792687 1 17.2917115 -5.752801371 24.89276675 0.899852096 1.010961044 0.41029451 0.057729394 176.0733529 507397.6669 0.016322671 0.027703554 1.77E-06 5.752801371 0.111108948 SATTT(ph)GSPGTEK ddPTM_A459_MK2206_30min_R1 2 SATTTGSPGTEK 12 0 A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 S(0.001)AT(0.002)T(0.112)T(0.69)GS(0.196)PGTEK;SAT(0.051)T(0.02)T(0.928)GS(0.001)PGTEK 226.42 2.20E-09 46672600 13392.9 11133 9075.2 8856.5 6222.2 6339.2 10446.6 10636.2 1146.63 6856.1 TRUE FALSE 12253.76353 10408.23968 8459.200709 9538.629165 5974.356598 6698.120026 9749.726375 10543.20882 1265.826292 7705.485429 1.590264966 1.350757168 1.097815418 1.237901136 0.775338122 0.869266458 1.265296841 1.368273151 0.164275996 1 12.91167013 -1.522878746 0.431975193 0.912550867 15.0144019 0.332366741 0.311983434 102.8083657 1.286987072 0.204316673 1263.501748 0.03 1.522878746 14.10185103 SATTTGS(ph)PGTEK ddPTM_A459_MK2206_30min_R1 1 SATTTGSPGTEK 12 0 A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 SAT(0.001)T(0.017)T(0.221)GS(0.759)PGT(0.001)EK 206.74 1.00E-05 9275600 4050.9 4276 3111.5 3058.9 2033 1981.4 3467.4 3332 380.57 2140 TRUE FALSE 3706.349683 3997.631623 2900.300049 3294.497008 1952.021305 2093.585156 3236.096073 3302.868675 420.1316134 2405.119356 1.541025261 1.662134402 1.20588612 1.369785246 0.811610991 0.870470378 1.345503317 1.373266016 0.17468223 1 11.23189278 -5.677932555 1.221341234 0.968926358 1.624539791 0.370675761 0.328903595 0.617299584 1.760404868 0.115055845 0.341527496 2.10E-06 5.677932555 0.655613433 SATTTGS(ph)PGTEK ddPTM_A459_MK2206_30min_R2 3 SATTTGSPGTEK 12 0 A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 SAT(0.001)T(0.01)T(0.08)GS(0.909)PGTEK;SAT(0.023)T(0.001)T(0.044)GS(0.932)PGTEK;SAT(0.011)T(0.272)T(0.027)GS(0.676)PGT(0.014)EK 193.11 0.00015352 23505400 113479 123119 118532 121751 139775 93670.1 138600 111481 107471 125169 TRUE FALSE 122167.0395 117005.0895 122483.7977 111803.5538 134286.7312 97234.78129 120401.6535 126051.9495 116818.6333 121084.7458 1.008938316 0.96630743 1.01155432 0.923349619 1.109030954 0.803030808 0.99435856 1.041022539 0.964767548 1 16.8856576 -7.508728695 24.93016049 1.005275159 0.969761094 0.036731808 0.07455812 2304.199173 4059655.779 0.031308982 0.020103848 3.10E-08 7.508728695 -0.035514065 SATTTPS(ph)GSPR ddPTM_A459_MK2206_30min_R2 1 SATTTPSGSPR 11 0 Q2M2I8-2;Q2M2I8;A0A096LP60;A0A096LP25;A0A096LNZ0 Q2M2I8-2;A0A096LP25 AAK1 AP2-associated protein kinase 1 1 S(0.01)AT(0.009)T(0.06)T(0.06)PS(0.81)GS(0.051)PR 83.137 0.03866 4400400 11825 12241 8644.4 17536 16200 15100 16147 12917 11388 12384 TRUE FALSE 12730.33109 11633.12974 8932.599982 16103.25271 15563.9066 15674.64108 14026.8795 14605.29625 12378.50766 11979.91109 1.062639864 0.971053095 0.745631575 1.344187998 1.299167121 1.308410468 1.170866745 1.219148968 1.03327208 1 13.54832958 -5.768229979 24.99991482 1.213448059 0.930902661 0.475407986 0.129081367 127.2942973 468641.5761 0.036495033 0.055523413 1.71E-06 5.768229979 -0.282545398 SATTTPSGS(ph)PR ddPTM_A459_MK2206_30min_R1 2 SATTTPSGSPR 11 0 Q2M2I8-2;Q2M2I8;A0A096LP60;A0A096LP25;A0A096LNZ0 Q2M2I8-2;A0A096LP25 AAK1 AP2-associated protein kinase 1 1 SATT(0.004)T(0.009)PS(0.126)GS(0.861)PR;SATTTPSGS(1)PR 122.18 0.0042268 7719700 2939.1 2529.44 2526.2 2191.14 2087.04 2493.96 2535.3 2134.4 1627.58 1859.43 TRUE FALSE 2689.114111 2364.772996 2354.728582 2359.901982 2003.908777 2635.16586 2366.174763 2115.739166 1796.772765 2089.790226 1.286786624 1.13158391 1.126777488 1.129253048 0.958904273 1.260971473 1.132254679 1.012417007 0.859786185 1 11.02914242 -1.522878745 0.159572796 0.937070262 2.073241985 0.399419477 0.097618007 74.71662356 0.772328481 0.311472015 19.9335327 0.03 1.522878745 1.136171723 SATTTPSGS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SATTTPSGSPR 11 0 Q2M2I8-2;Q2M2I8;A0A096LP60;A0A096LP25;A0A096LNZ0 Q2M2I8-2;A0A096LP25 AAK1 AP2-associated protein kinase 1 1 SATTTPSGS(1)PR 103.21 0.013513 5173500 26109 34666 30164 35889 30509 35599 35374 28186 32390 32748 TRUE FALSE 28107.92511 32944.53685 31169.6527 32956.7539 29311.06336 36953.74489 30729.35131 31870.00698 35207.22365 31679.43544 0.887260922 1.039934468 0.983908086 1.040320114 0.925239448 1.166490008 0.970009436 1.006015623 1.111358936 1 14.951259 -4.757832853 24.8859084 1.025681601 0.887260715 0.287348843 0.066003322 124.933018 861929.7576 0.015508233 0.110941816 1.75E-05 4.757832853 -0.138420886 SAVAVYSYSCEGPEEES(ph)EDDSHLEGR ddPTM_A459_MK2206_30min_R1 3 SAVAVYSYSCEGPEEESEDDSHLEGR 26 0 A0A1B0GTI3;A0A1B0GTY1;A0A1B0GUC3;A0A1B0GV98;A0A1B0GTC5;A0A1B0GU26;A0A1B0GTC3;A0A1B0GVH5;Q9C0B1 A0A1B0GTI3 FTO Alpha-ketoglutarate-dependent dioxygenase FTO 1 SAVAVYSYSCEGPEEES(0.988)EDDS(0.012)HLEGR;SAVAVYSYSCEGPEEES(0.982)EDDS(0.018)HLEGR;SAVAVYSYSCEGPEEES(0.766)EDDS(0.234)HLEGR 220.41 7.16E-36 27664600 4474.7 4723.9 5228 3671.64 4769.4 5248.9 6345.7 4795.29 5636.5 7684.2 TRUE FALSE 4094.103267 4416.373251 4873.137926 3954.430349 4579.424699 5546.088182 5922.389931 4753.365285 6222.434345 8636.176709 0.474064323 0.511380603 0.564270289 0.45789132 0.530260653 0.642192531 0.685765256 0.550401578 0.720507993 1 13.07617705 -14.52287875 0.131047883 2.51602433 0.385666644 0.879223324 0.053195466 47.34471393 0.388821161 18.62439223 0.409537848 3.00E-15 14.52287875 -2.130357686 SAVAVYSYSCEGPEEESEDDS(ph)HLEGR ddPTM_A459_MK2206_30min_R1 1 SAVAVYSYSCEGPEEESEDDSHLEGR 26 0 A0A1B0GTI3;A0A1B0GTY1;A0A1B0GUC3;A0A1B0GV98;A0A1B0GTC5;A0A1B0GU26;A0A1B0GTC3;A0A1B0GVH5;Q9C0B1 A0A1B0GTI3 FTO Alpha-ketoglutarate-dependent dioxygenase FTO 1 SAVAVYSYSCEGPEEES(0.061)EDDS(0.939)HLEGR 81.406 0.0011463 0 3967.9 437.39 481.15 462.46 5742.7 8741.8 4150.7 1599.5 285.29 355.43 TRUE FALSE 3630.409269 408.9158315 448.4908786 498.0787493 5513.956099 9236.753161 3873.814376 1585.51574 314.9469164 399.4633518 9.08821611 1.023662946 1.122733479 1.246869699 13.80340918 23.12290507 9.697546369 3.969114396 0.788425058 1 8.641919341 -4.497695473 22.77420228 6.747013448 17.85873696 0.009557791 7.053784101 1316.635401 1304477.175 1.906156644 57868.12649 3.18E-05 4.497695473 11.11172351 SAVCIADPLPT(ph)PSQEK ddPTM_A459_MK2206_30min_R1 1 SAVCIADPLPTPSQEK 16 0 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 SAVCIADPLPT(0.856)PS(0.144)QEK 165.89 4.06E-05 3355800 3725.8 4332.2 4446.7 4020.7 3348.4 3653.3 4128.1 4139.1 4732.9 4734.3 TRUE FALSE 3408.901145 4050.172993 4144.870393 4330.375011 3215.026138 3860.146689 3852.721981 4102.912285 5224.901892 5320.820826 0.640672042 0.761193268 0.778990785 0.813854695 0.604234994 0.725479548 0.724084142 0.771105139 0.981972907 1 12.37743311 -8.228064847 3.086302494 1.004760322 0.724896422 0.769647823 0.058225979 0.121918839 2.1876268 0.052915522 0.015732425 5.91E-09 8.228064847 -0.279863899 SAVCIADPLPT(ph)PSQEK ddPTM_A459_MK2206_30min_R2 1 SAVCIADPLPTPSQEK 16 0 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 SAVCIADPLPT(0.667)PS(0.333)QEK 127.05 0.0025029 6574400 58132 46055 55385 58883 57590 39737 61848 46467 37738 60141 TRUE FALSE 62582.63062 43767.97567 57231.50826 54072.07054 55328.72723 41249.21938 53727.28331 52540.39645 41020.38303 58178.6041 1.075698388 0.752303641 0.983720891 0.929415055 0.951015035 0.709010125 0.923488697 0.903087952 0.705076783 1 15.82820106 SAVCIADPLPTPS(ph)QEK ddPTM_A459_MK2206_30min_R2 1 SAVCIADPLPTPSQEK 16 0 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 SAVCIADPLPT(0.002)PS(0.998)QEK 218.66 1.08E-10 5596800 87999 75925 70608 67541 59947 50850 81157 60521 48073 77762 TRUE FALSE 94736.2711 72154.67491 72962.03548 62022.68425 57593.17957 52785.13238 70500.98841 68431.3025 52254.30264 75224.63231 1.259378321 0.959189466 0.969922128 0.824499666 0.765615967 0.701700105 0.937206155 0.909692748 0.69464351 1 16.19891753 -4.005810881 0.940528573 0.828926634 2.555394308 0.620026039 0.098285559 4.902686923 1.192020394 0.032408089 12.24447937 9.87E-05 4.005810881 1.726467674 SAVENCQDSWR ddPTM_A459_MK2206_30min_R2 3 SAVENCQDSWR 11 0 P52209-2;P52209 P52209-2 PGD "6-phosphogluconate dehydrogenase, decarboxylating" 0 ;; 252.14 1.82E-14 143906000 175551 201762 172940 249539 168194 188605 226163 157332 162606 175166 FALSE TRUE 188991.3195 191742.7925 178705.7333 229150.8655 161589.8585 195782.4954 196467.5264 177895.8326 176749.176 169450.3478 1.11531975 1.131557385 1.054620044 1.35231865 0.953611843 1.155397425 1.15944009 1.049840469 1.043073551 1 17.37050307 -7.875578911 5.019538733 1.029434487 1.131137972 0.195426423 0.094383319 0.359267021 14.1081773 0.051855372 0.024129355 1.33E-08 7.875578911 0.101703485 SAVLCYS(ph)PSDR ddPTM_A459_MK2206_30min_R2 1 SAVLCYSPSDR 11 0 Q86XL3;F5H1D4;Q86XL3-3 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 SAVLCYS(0.912)PS(0.087)DR 123.26 0.003915 4383400 10629 15219 13565 11507 14778 12542 18487 11935 12735 13670 TRUE FALSE 11442.76441 14463.24659 14017.25033 10566.84129 14197.74147 13019.2946 16059.63469 13494.94548 13842.66728 13223.94902 0.86530615 1.093716149 1.059989744 0.799068514 1.073638551 0.984523956 1.214435617 1.020492854 1.046787708 1 13.69086545 SAVQKPPS(ph)TGSAPAIESVD ddPTM_A459_MK2206_30min_R2 1 SAVQKPPSTGSAPAIESVD 19 1 Q9NUQ3;Q9NUQ3-2 Q9NUQ3 TXLNG Gamma-taxilin 1 SAVQKPPS(0.601)T(0.18)GS(0.218)APAIES(0.001)VD 106.31 0.0039274 6115200 27739 35342 32428 28017 35658 24452 40172 29211 29864 37075 TRUE FALSE 29862.71917 33586.96767 33509.13334 25727.92148 34257.88775 25382.53799 34897.36814 33028.978 32461.51674 35865.24579 0.83263668 0.936476718 0.93430653 0.717349649 0.95518341 0.707719617 0.973013495 0.920918769 0.905096732 1 15.1302989 -8.227507056 0.894319854 0.988354549 0.859280051 0.189865815 0.08765546 0.948974141 1.584336059 0.080526142 0.02956102 5.92E-09 8.227507056 -0.129074498 SAVRPAS(ph)LNLNR ddPTM_A459_MK2206_30min_R1 3 SAVRPASLNLNR 12 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 SAVRPAS(1)LNLNR;SAVRPAS(1)LNLNR;S(0.008)AVRPAS(0.992)LNLNR 119.21 0.020563 24376200 6851.83 7684.64 8257.71 7333.2 7146.2 7068.1 6867.25 7170.92 6480.34 5763.38 TRUE FALSE 6269.045878 7184.368539 7697.199652 7898.004335 6861.551722 7468.289714 6409.148283 7108.225402 7153.994533 6477.391026 0.967835021 1.109145412 1.188317892 1.219318751 1.059307937 1.152978056 0.989464471 1.097390195 1.104456178 1 12.66119712 -7.240709745 24.83726442 1.055943546 1.121218144 0.165816023 0.073661562 1516.039038 1816448.432 0.029182355 0.022577709 5.75E-08 7.240709745 0.065274598 SAVS(ph)PDLHITPIYEGR ddPTM_A459_MK2206_30min_R1 2 SAVSPDLHITPIYEGR 16 0 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 S(0.351)AVS(0.649)PDLHITPIYEGR;S(0.019)AVS(0.981)PDLHITPIYEGR 110.37 0.0018574 19753600 7863.2 5469 6690.4 5038.4 8933.5 8112.2 8773.4 7591.3 5980.4 5525.5 TRUE FALSE 7194.393549 5112.967106 6236.274289 5426.458441 8577.659778 8571.505754 8188.142494 7524.930064 6602.083981 6210.040655 1.158509895 0.823338749 1.00422439 0.873820115 1.381256622 1.380265642 1.318532832 1.211736039 1.063130557 1 12.600387 -6.255576953 24.99628288 1.248764981 0.957660179 0.438230849 0.143181557 417.0623528 1778274.177 0.042642804 0.053554491 5.55E-07 6.255576953 -0.291104802 SAVS(ph)PDLHITPIYEGR ddPTM_A459_MK2206_30min_R2 2 SAVSPDLHITPIYEGR 16 0 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 SAVS(1)PDLHITPIYEGR;S(0.211)AVS(0.789)PDLHITPIYEGR 126.07 0.0011525 8793200 28327 32224 24792 38743 34159 36096 38671 30926 33078 37020 TRUE FALSE 30495.7369 30623.80302 25618.55291 35577.57297 32817.74602 37469.65857 33593.45125 34968.13438 35955.06465 35812.04043 0.851549829 0.855125892 0.715361443 0.993452831 0.916388612 1.046286615 0.938049071 0.976435131 1.003993747 1 15.1281571 -5.780245648 24.99404704 0.979207431 0.812123734 0.725908646 0.049156599 118.3078662 157234.0096 0.013465839 0.020010522 1.66E-06 5.780245648 -0.167083696 SAVVAAAAPASVADDT(ph)PPPERR ddPTM_A459_MK2206_30min_R1 1 SAVVAAAAPASVADDTPPPERR 22 1 D6RCN9;D6R966;D6RHG9;D6RHC6;D6RIR8;D6R9V1;E7EV55;D6RDY2;D6RBE0;E7EVI8;Q7LFL8 D6RCN9 CXXC5 CXXC-type zinc finger protein 5 1 SAVVAAAAPAS(0.008)VADDT(0.992)PPPERR 82.294 0.0011651 7620800 1508.5 1095.3 1277.8 963.07 1343.7 1301.4 1487.9 1314.6 1099.7 948.41 TRUE FALSE 1380.194154 1023.995771 1191.066496 1037.245818 1290.177584 1375.084143 1388.644906 1303.106591 1214.01775 1065.906191 1.294855181 0.960680949 1.117421501 0.973111731 1.210404438 1.290061128 1.302783413 1.22253403 1.138953653 1 10.05786476 -6.369552189 9.717327303 1.215915328 1.079835549 0.151432056 0.117844367 0.574576711 47.88800672 0.035123513 0.039820243 4.27E-07 6.369552189 -0.136079779 SAYLPGQTS(ph)PK ddPTM_A459_MK2206_30min_R1 1 SAYLPGQTSPK 11 0 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 SAYLPGQT(0.19)S(0.81)PK 116.03 0.0060073 12625000 4606.8 5743.2 5738.8 4894.8 3874.9 3309.8 4020.3 3955.4 4928 4434.5 TRUE FALSE 4214.967469 5369.316636 5349.266245 5271.798344 3720.554528 3497.198016 3752.113122 3920.818355 5440.283235 4983.879339 0.845720208 1.077336804 1.073313755 1.057770059 0.746517778 0.701701983 0.752849912 0.786700096 1.091576032 1 12.28305343 -6.253807681 24.48691702 0.823964469 1.02236237 0.274343279 0.129642155 521.8696364 1674458.77 0.039256175 0.049653167 5.57E-07 6.253807681 0.198397901 SAYLPGQTS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SAYLPGQTSPK 11 0 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 SAYLPGQT(0.115)S(0.885)PK;SAYLPGQT(0.194)S(0.806)PK 115.92 0.0060378 15314900 145031 132021 137642 119856 131521 92939 160581 109790 90207 141220 TRUE FALSE 156134.6849 125465.0291 142230.9156 110063.3814 126356.8247 96475.85877 139496.5218 124139.93 98053.0418 136612.003 1.142906051 0.91840414 1.041130446 0.805664063 0.924932085 0.706203384 1.021114681 0.908704413 0.717748365 1 17.05972472 -1.522878773 0.727629551 0.871062805 40.32155847 0.328131165 0.110217738 383.1394657 1.816949647 0.040448779 24698.66922 0.029999998 1.522878773 39.45049567 SAYPPPAPAYALS(ph)SPR ddPTM_A459_MK2206_30min_R1 2 SAYPPPAPAYALSSPR 16 0 O14497-2;O14497 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 SAYPPPAPAYALS(0.5)S(0.5)PR;SAYPPPAPAYALS(0.5)S(0.5)PR 178.67 1.10E-06 17087800 6190.4 5149.3 5690.7 4796 6403.8 5354.4 6027.1 5523.2 5079.3 4506 TRUE FALSE 5663.873973 4814.079634 5304.431139 5165.388751 6148.723086 5657.561501 5625.043156 5474.911245 5607.311411 5064.237299 1.118406117 0.950603092 1.047429421 1.019973679 1.214145926 1.117159637 1.110738464 1.081092951 1.107237098 1 12.30612929 SAYPPPAPAYALS(ph)SPR ddPTM_A459_MK2206_30min_R2 3 SAYPPPAPAYALSSPR 16 0 O14497-2;O14497 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 SAYPPPAPAY(0.214)ALS(0.393)S(0.393)PR;SAYPPPAPAY(0.013)ALS(0.625)S(0.362)PR;SAYPPPAPAY(0.004)ALS(0.498)S(0.498)PR 97.2 0.0077499 20930700 89943 93968 83354 103837 94965 102286 102264 81773 86345 96016 TRUE FALSE 96829.10523 89301.68576 86132.98076 95353.18494 91236.19694 106178.5654 88836.61396 92461.01187 93855.13202 92883.00578 1.042484623 0.961442677 0.927327664 1.026594522 0.982270074 1.143143081 0.956435606 0.995456716 1.010466137 1 16.50312704 -4.459077086 9.597993494 1.001295107 1.211134197 0.049828173 0.055058708 10182.0296 76026.4222 0.013968503 36069.52193 3.47E-05 4.459077086 0.20983909 SAYPPPAPAYALSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SAYPPPAPAYALSSPR 16 0 O14497-2;O14497 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 SAYPPPAPAYALS(0.228)S(0.772)PR 196.45 1.18E-06 5776800 20362 25594 14772 18856 16281 23777 25293 17099 19137 18417 TRUE FALSE 21920.93038 24323.03918 15264.49111 17315.40448 15641.72613 24681.8504 21971.99872 19333.89801 20801.50167 17816.0548 1.230403174 1.365231498 0.856782901 0.971898924 0.877956782 1.385371266 1.233269597 1.085195248 1.167570593 1 14.12089028 -8.417610315 0.007325267 2.17E-07 2.208408933 0.022006208 0.177784785 22208.03435 119.4281503 18139.66725 17850.84524 3.82E-09 8.417610315 2.208408716 SAYQEYDS(ph)DSDVPEELKR ddPTM_A459_MK2206_30min_R1 1 SAYQEYDSDSDVPEELKR 18 1 H0Y7Q2;Q96JG6-3;Q96JG6 H0Y7Q2 CCDC132 Coiled-coil domain-containing protein 132 1 SAYQEYDS(0.868)DS(0.132)DVPEELKR 78.352 0.0066761 8758100 1996.4 2314.2 2106.7 1667.4 1748.1 1966.7 2139.9 2067.3 1841.3 2029.1 TRUE FALSE 1826.595696 2163.545159 1963.703074 1795.823437 1678.469475 2078.052854 1997.151175 2049.225814 2032.709724 2280.480227 0.800969758 0.94872349 0.86109191 0.787475995 0.736015799 0.911234761 0.875759041 0.898593985 0.891351611 1 11.15512195 -8.616983783 0.672330652 0.998739822 0.840632867 0.405147408 0.057560641 0.99060506 0.999729678 0.062874045 0.024828109 2.42E-09 8.616983783 -0.158106955 SAYQEYDS(ph)DSDVPEELKR ddPTM_A459_MK2206_30min_R2 3 SAYQEYDSDSDVPEELKR 18 1 H0Y7Q2;Q96JG6-3;Q96JG6 H0Y7Q2 CCDC132 Coiled-coil domain-containing protein 132 1 SAYQEYDS(0.998)DS(0.002)DVPEELKR;SAYQEYDS(0.943)DS(0.056)DVPEELKR;S(0.135)AY(0.001)QEY(0.001)DS(0.85)DS(0.012)DVPEELKR 102.29 0.0011998 47675600 118833 100722 110888 106957 95168 87226 125343 90177 81806 108083 TRUE FALSE 127930.9458 95720.29194 114584.9506 98218.27096 91431.22614 90545.44655 108885.3135 101963.4435 88921.33801 104556.2606 1.223560839 0.915490774 1.095916686 0.939382017 0.874469168 0.865997369 1.041404053 0.975201705 0.850464023 1 16.67391992 -2.633294713 1.517048687 0.947386613 199.9834152 0.511024811 0.077755105 853.6210967 3.521548802 0.021695362 589757.1854 0.002326512 2.633294713 199.0360286 SCDDFSHMGT(ph)LPHSKSPR ddPTM_A459_MK2206_30min_R2 1 SCDDFSHMGTLPHSKSPR 18 1 O75815 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 SCDDFS(0.001)HMGT(0.68)LPHS(0.16)KS(0.16)PR 55.755 0.037689 3400000 9567.5 21802 15279 21123 23782 18922 21989 17352 21660 14472 TRUE FALSE 10299.99516 20719.34438 15788.39423 19397.18333 22848.19919 19642.08997 19101.81789 19619.96598 23543.94765 13999.77983 0.73572551 1.479976445 1.127760181 1.385534885 1.632039894 1.403028491 1.364437022 1.401448182 1.681736995 1 13.77311652 -4.757127218 24.99515529 1.398191738 0.73572453 0.503142423 0.193596272 103.4708071 599684.1151 0.046353007 0.353537552 1.75E-05 4.757127218 -0.662467208 SCDELSPVS(ph)PTQGGYPSEPTR ddPTM_A459_MK2206_30min_R1 1 SCDELSPVSPTQGGYPSEPTR 21 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 SCDELS(0.021)PVS(0.937)PT(0.042)QGGYPSEPTR 186.06 4.02E-17 0 997.96 745.35 807.3 473.17 689.47 570.33 776.36 650.33 536.67 484.99 TRUE FALSE 913.0782615 696.8275795 752.5027253 509.6136354 662.0069499 602.6215917 724.5704409 644.6442334 592.458767 545.0742227 1.675144822 1.27840861 1.38055093 0.934943562 1.214526247 1.105577124 1.329306012 1.182672389 1.086932279 1 9.090308885 -3.84688772 0.980583784 1.148644432 4.06646804 0.625159276 0.123993611 6.728383204 1.31508557 0.038932427 32.01896059 0.00014227 3.84688772 2.917823608 SCDELSPVS(ph)PTQGGYPSEPTR ddPTM_A459_MK2206_30min_R2 2 SCDELSPVSPTQGGYPSEPTR 21 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 SCDELS(0.005)PVS(0.912)PT(0.083)QGGYPSEPTR;SCDELS(0.14)PVS(0.818)PT(0.042)QGGYPSEPTR 155.16 2.09E-07 15677200 129494 156688 129542 134358 117856 104299 136315 106509 105266 122286 TRUE FALSE 139408.1602 148907.1018 133860.8656 123380.5216 113228.3813 108268.1715 118416.6768 120430.092 114421.8464 118295.8178 1.178470742 1.258768945 1.131577329 1.042982955 0.957163012 0.915232453 1.001021667 1.01804184 0.967251831 1 16.85203954 -5.721548033 2.087696163 0.976473924 1.218344833 0.888676736 0.034392777 0.095576731 0.847721251 0.010734199 0.021674039 1.90E-06 5.721548033 0.241870909 SCDEPLT(ph)PPPHSPTSMLQLIHDPVSPR ddPTM_A459_MK2206_30min_R2 1 SCDEPLTPPPHSPTSMLQLIHDPVSPR 27 0 I3VM54;Q9Y2K7-3;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2 I3VM54 KDM2A Lysine-specific demethylase 2A 1 S(0.026)CDEPLT(0.971)PPPHS(0.002)PT(0.001)SMLQLIHDPVSPR 66.372 0.00090615 2565300 15860 24835 14327 22818 22723 22937 25784 17047 19608 19578 TRUE FALSE 17074.25379 23601.73001 14804.65503 20953.69641 21830.78085 23809.88361 22398.52983 19275.10143 21313.4684 18939.17146 0.90153119 1.246185983 0.781694968 1.106368167 1.152678769 1.257176622 1.182656267 1.017737311 1.125364351 1 14.2090856 -4.724749131 23.70312303 1.097121832 0.901527985 0.164238966 0.132042486 6417.309978 4145305.21 0.033318218 7.307913067 1.88E-05 4.724749131 -0.195593847 SCDEPLTPPPHS(ph)PTSMLQLIHDPVSPR ddPTM_A459_MK2206_30min_R2 3 SCDEPLTPPPHSPTSMLQLIHDPVSPR 27 0 I3VM54;Q9Y2K7-3;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2 I3VM54 KDM2A Lysine-specific demethylase 2A 1 SCDEPLT(0.006)PPPHS(0.868)PT(0.082)S(0.044)MLQLIHDPVSPR;SCDEPLT(0.001)PPPHS(0.981)PT(0.008)S(0.01)MLQLIHDPVSPR;S(0.005)CDEPLT(0.151)PPPHS(0.503)PT(0.171)S(0.171)MLQLIHDPVSPR 102.29 3.36E-07 15088200 48681.9 86578.7 71877.1 79318.6 83217.6 97905.1 93455.4 73146.3 69396.7 76026.7 TRUE FALSE 52409.02369 82279.32766 74273.44664 72838.01665 79950.05889 101630.9472 81184.59372 82706.77256 75432.69953 73545.95501 0.712602395 1.118747151 1.009891661 0.990374204 1.087076222 1.381869977 1.103862119 1.124559094 1.025653954 1 16.16635838 -4.759826295 24.99766831 1.100741784 0.712601916 0.528009305 0.107862344 34.81136175 539295.2682 0.028498921 0.176113813 1.74E-05 4.759826295 -0.388139868 SCDGAAGLPEVPAESSS(ph)SPPGSEVASLTQPEK ddPTM_A459_MK2206_30min_R2 1 SCDGAAGLPEVPAESSSSPPGSEVASLTQPEK 32 0 Q63ZY3-3;Q63ZY3;Q63ZY3-2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 SCDGAAGLPEVPAES(0.012)S(0.053)S(0.92)S(0.015)PPGSEVASLTQPEK 126.15 4.81E-16 0 13678 14615 14550 14034 18434 16868 15745 15000 14491 16568 TRUE FALSE 14725.1982 13889.24035 15035.08974 12887.37731 17710.18854 17509.92356 13677.66259 16960.5515 15751.40099 16027.38752 0.918752241 0.866594156 0.938087366 0.804084714 1.104995341 1.092500168 0.853393142 1.058223088 0.982780317 1 13.96825166 -6.258666714 24.9999972 1.013989627 0.884802641 0.440577829 0.073622204 249.9163137 2253390.203 0.022320612 0.027514706 5.51E-07 6.258666714 -0.129186986 SCFES(ph)SPDPELK ddPTM_A459_MK2206_30min_R1 2 SCFESSPDPELK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SCFES(0.5)S(0.5)PDPELK;SCFES(0.5)S(0.5)PDPELK 271.32 7.79E-34 2112300000 31788 33804 33342 29799 27596 23859 29449 29693 29067 25635 TRUE FALSE 29084.26367 31603.35346 31078.83794 32094.12414 26496.79288 25209.87596 27484.51094 29433.39723 32088.61867 28810.85733 1.009489698 1.096925131 1.07871965 1.113959358 0.91968082 0.875013043 0.953963661 1.021607823 1.113768268 1 14.81432497 -6.255155185 24.95686378 0.975134268 1.076637593 0.334634621 0.064701391 612.4026937 2432079.729 0.021169916 0.026643008 5.56E-07 6.255155185 0.101503325 SCFES(ph)SPDPELK ddPTM_A459_MK2206_30min_R2 3 SCFESSPDPELK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SCFES(0.5)S(0.5)PDPELK;SCFES(0.733)S(0.267)PDPELK;SCFES(0.942)S(0.058)PDPELK 287.29 8.38E-56 2125330000 3670950 3671650 3596820 3513380 3704370 2732430 4195280 3144530 2827260 3607140 TRUE FALSE 3952000.754 3489321.2 3716736.184 3226325.615 3558917.821 2836414.538 3644434.697 3555530.868 3073169.964 3489439.317 1.13256039 0.99996615 1.065138507 0.924597141 1.019911079 0.812856818 1.044418419 1.01894045 0.880705949 1 21.73456381 -1.522885698 0.667385166 0.959116105 17.75984599 0.326410409 0.072699989 286.4017543 1.729202602 0.028988654 7135.970082 0.02999952 1.522885698 16.80072988 SCFESS(ph)PDPELK ddPTM_A459_MK2206_30min_R1 1 SCFESSPDPELK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SCFES(0.043)S(0.957)PDPELK 179.6 0.00010389 237990000 11501 12694 13908 10793 10634 8648.5 10271 10564 10613 8874 TRUE FALSE 10522.77956 11867.61829 12963.96371 11624.27873 10210.42526 9138.170596 9585.84033 10471.64006 11716.25933 9973.378115 1.055086795 1.189929646 1.299856835 1.165530735 1.02376799 0.916256307 0.961142776 1.049959195 1.174753348 1 13.28386653 -6.241796263 4.848749954 1.01455047 1.189127082 0.45527768 0.083699188 0.179511756 11.93662325 0.027325252 0.034164983 5.73E-07 6.241796263 0.174576612 SCFESS(ph)PDPELK ddPTM_A459_MK2206_30min_R2 2 SCFESSPDPELK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SCFES(0.124)S(0.876)PDPELK;SCFES(0.019)S(0.981)PDPELK 241.35 2.01E-13 757156000 241640 257960 271571 240553 256515 188194 309374 233254 196282 254823 TRUE FALSE 260140.1442 245150.0815 280625.0416 220899.0504 246442.9322 195355.8545 268752.8222 263741.0987 213354.2536 246508.1464 1.055300395 0.994490791 1.138400681 0.896112577 0.999735448 0.792492489 1.09023911 1.069908247 0.865505894 1 17.9112758 -5.767566018 24.99643544 0.962264866 1.055906639 0.21011502 0.091613943 250.7430034 1023025.955 0.02578693 0.039371714 1.71E-06 5.767566018 0.093641773 SCGTDSQSENEAS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 SCGTDSQSENEASPVK 16 0 H0Y398;C9JQ48;Q9H8U3 H0Y398 ZFAND3 AN1-type zinc finger protein 3 1 SCGTDSQSENEAS(1)PVK;SCGTDSQSENEAS(1)PVK 248.01 2.83E-29 10696500 32107 28867 30273 31308 26343 21927.6 33348 28649 19953.2 31393 TRUE FALSE 34565.13661 27433.50676 31282.28671 28750.03625 25308.64146 22762.07018 28969.36754 32393.52267 21688.69327 30368.64898 1.138184864 0.903349595 1.030084899 0.946701194 0.833380552 0.749525282 0.953923487 1.066676449 0.71418038 1 14.89029511 -1.522878745 0.803599963 0.896987643 57.39059682 0.270806107 0.110303894 729.8325475 2.500132423 0.03956377 75084.28432 0.03 1.522878745 56.49360917 SCGTDSQSENEAS(ph)PVKRPR ddPTM_A459_MK2206_30min_R1 2 SCGTDSQSENEASPVKRPR 19 2 H0Y398;C9JQ48;Q9H8U3 H0Y398 ZFAND3 AN1-type zinc finger protein 3 1 SCGTDSQS(0.001)ENEAS(0.999)PVKRPR;SCGTDSQSENEAS(1)PVKRPR 77.66 0.0031193 6496900 3374 3077.1 3716.2 3400.7 3881 3176.1 3366.4 3882.3 2724 2179.08 TRUE FALSE 3087.023582 2876.780231 3463.954698 3662.622503 3726.411552 3355.928037 3141.833598 3848.35746 3007.169548 2449.040882 1.260503083 1.174655863 1.41441277 1.495533427 1.52157997 1.370302988 1.28288328 1.571373303 1.227896835 1 11.25800114 -8.529926609 22.76771978 0.999999991 1.385386656 0.513993139 0.116983893 214.6201607 693320.719 0.120222353 0.031041278 2.95E-09 8.529926609 0.385386665 SCGTDSQSENEAS(ph)PVKRPR ddPTM_A459_MK2206_30min_R2 3 SCGTDSQSENEASPVKRPR 19 2 H0Y398;C9JQ48;Q9H8U3 H0Y398 ZFAND3 AN1-type zinc finger protein 3 1 SCGTDSQSENEAS(1)PVKRPR;SCGTDSQSENEAS(1)PVKRPR;SCGTDSQSENEAS(1)PVKRPR 101.3 0.0004671 21716000 70171 125829 103785 108939 121599 118129 111588 90062 115068 105005 TRUE FALSE 75543.34571 119580.5148 107245.1401 100038.3352 116824.4123 122624.4819 96936.36156 101833.4126 125076.4066 101578.6954 0.743692813 1.177220423 1.05578379 0.984835794 1.15008774 1.207187012 0.954298154 1.002507585 1.231325192 1 16.63223833 -4.751473094 24.98245992 1.08263866 0.74369212 0.534617578 0.095458427 326.5266907 818447.0295 0.023668794 0.310354668 1.77E-05 4.751473094 -0.33894654 SCLQCRPPS(ph)PPESSVPQQQVK ddPTM_A459_MK2206_30min_R2 1 SCLQCRPPSPPESSVPQQQVK 21 1 P41002 P41002 CCNF Cyclin-F 1 SCLQCRPPS(0.989)PPES(0.01)S(0.001)VPQQQVK 83.393 0.00075231 4435000 13154 16345 14755 15005 16798 15368 21618 14198 15465 15101 TRUE FALSE 14161.08035 15533.33107 15246.92434 13779.0435 16138.42612 15952.84001 18779.53063 16053.72735 16810.11775 14608.25561 0.969388867 1.063325525 1.043719712 0.943236747 1.10474697 1.092042776 1.285542308 1.098948963 1.150727246 1 13.83449629 -6.49775878 3.388705498 1.140317155 1.011862821 0.359772603 0.074660722 0.253028449 6.025710637 0.024453165 0.026440738 3.18E-07 6.49775878 -0.128454334 SCMLT(ph)GTPESVQSAK ddPTM_A459_MK2206_30min_R2 3 SCMLTGTPESVQSAK 15 0 Q96AE4;E9PEB5;Q96AE4-2;C9JSZ1 Q96AE4 FUBP1 Far upstream element-binding protein 1 1 S(0.037)CMLT(0.524)GT(0.428)PES(0.011)VQSAK;S(0.005)CMLT(0.42)GT(0.154)PES(0.42)VQS(0.001)AK;S(0.199)CMLT(0.684)GT(0.117)PESVQSAK 233.28 8.06E-14 38976000 175795 207523 206976 228866 208889 178675 218707 168771 172199 207390 TRUE FALSE 189254.0004 197217.7096 213876.4765 210166.9157 200686.9683 185474.6023 189990.5082 190829.9492 187176.5578 200622.8813 0.943332082 0.983027002 1.066062232 1.047572013 1.00031944 0.924493762 0.947003188 0.951187362 0.932977119 1 17.61412663 -6.643982036 5.897595744 0.948082906 1.013382473 0.377249353 0.03646219 0.221869882 10.60735424 0.012887493 0.012847244 2.27E-07 6.643982036 0.065299567 SCMLTGT(ph)PESVQSAK ddPTM_A459_MK2206_30min_R1 1 SCMLTGTPESVQSAK 15 0 Q96AE4;E9PEB5;Q96AE4-2;C9JSZ1 Q96AE4 FUBP1 Far upstream element-binding protein 1 1 S(0.002)CMLT(0.285)GT(0.708)PES(0.006)VQSAK 144.73 0.00087032 3232000 1209.9 1305.1 1238.9 997.37 924.74 959.94 970.51 1152.8 867.05 1029.5 TRUE FALSE 1106.991652 1220.137753 1154.80692 1074.18761 887.9056476 1014.290973 905.7690487 1142.721191 957.1829503 1157.042232 0.95674265 1.054531735 0.99806808 0.928391013 0.767392601 0.876623986 0.78283145 0.987622715 0.827267081 1 10.17622581 -5.903003781 3.737676539 0.867147669 1.008251249 0.369353667 0.074972847 0.218223055 5.856576859 0.020887758 0.032248773 1.25E-06 5.903003781 0.14110358 SCMLTGT(ph)PESVQSAK ddPTM_A459_MK2206_30min_R2 3 SCMLTGTPESVQSAK 15 0 Q96AE4;E9PEB5;Q96AE4-2;C9JSZ1 Q96AE4 FUBP1 Far upstream element-binding protein 1 1 S(0.001)CMLT(0.272)GT(0.655)PES(0.073)VQSAK;SCMLT(0.001)GT(0.999)PESVQSAK;SCMLT(0.03)GT(0.97)PESVQSAK 185.63 5.02E-05 19819800 74943 87799 75405 86134 69937 63032 85375 65523 64836 79193 TRUE FALSE 80680.6937 83439.02933 77918.96506 79096.57667 67190.92197 65430.72693 74165.15995 74087.08107 70475.31808 76608.9389 1.053149866 1.089155267 1.017100174 1.0324719 0.877063734 0.854087367 0.968100603 0.967081416 0.919935964 1 16.22522512 -6.136894656 5.328164887 0.927718975 1.05176787 0.632327909 0.043773031 0.154804077 6.09060997 0.013830773 0.018060996 7.30E-07 6.136894656 0.124048895 SCMLTGTPES(ph)VQSAK ddPTM_A459_MK2206_30min_R1 1 SCMLTGTPESVQSAK 15 0 Q96AE4;E9PEB5;Q96AE4-2;C9JSZ1 Q96AE4 FUBP1 Far upstream element-binding protein 1 1 S(0.001)CMLT(0.179)GT(0.142)PES(0.669)VQS(0.009)AK 164.63 9.30E-05 5330000 1639.1 1801.6 1625.8 1418.1 1145.4 1565.9 1746.8 1421.8 1478.5 1203.4 TRUE FALSE 1499.685938 1684.315513 1515.445226 1527.322308 1099.776293 1654.559905 1630.274159 1409.369352 1632.195366 1352.486277 1.108836343 1.24534758 1.12048843 1.129270096 0.813151535 1.223346908 1.205390536 1.042058153 1.206811036 1 10.40139824 -5.566724636 3.356922392 1.089733185 1.178250513 0.076972383 0.119593519 0.640706982 14.82156866 0.033829451 0.067139457 2.71E-06 5.566724636 0.088517328 SCPETLTHAVGMS(ph)ESPIGPK ddPTM_A459_MK2206_30min_R1 1 SCPETLTHAVGMSESPIGPK 20 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 SCPETLTHAVGMS(0.855)ES(0.145)PIGPK 89.043 0.0035405 12362000 5345.2 3918.9 4385 3502.7 4635 4412.3 4768.7 4807 4041.3 3949.6 TRUE FALSE 4890.562671 3663.778898 4087.358417 3772.478561 4450.378135 4662.120613 4450.588724 4764.972906 4461.407597 4438.906266 1.10174948 0.825378748 0.920803048 0.849866687 1.002584391 1.050285889 1.002631833 1.073456527 1.005069116 1 12.11598853 -6.446254694 6.688202608 1.029152893 0.917450836 0.31034599 0.071820253 0.272244984 19.91021239 0.02143331 0.024209613 3.58E-07 6.446254694 -0.111702057 SCPETLTHAVGMS(ph)ESPIGPK ddPTM_A459_MK2206_30min_R2 1 SCPETLTHAVGMSESPIGPK 20 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 SCPETLTHAVGMS(0.803)ES(0.197)PIGPK 74.561 0.01202 14834000 84186 74330 67300 82579 79024 65499 96640 72730 75373 80756 TRUE FALSE 90631.34489 70638.88029 69543.74841 75832.03154 75921.1207 67991.61034 83951.05191 82236.06072 81928.8073 78120.93833 1.16014153 0.904224678 0.890206261 0.97070047 0.97184087 0.870337861 1.074629334 1.052676305 1.048743257 1 16.25342166 -7.288497603 24.84085049 1.048401924 0.956333044 0.214167619 0.077147286 1023.346505 939480.607 0.031872722 0.021495149 5.15E-08 7.288497603 -0.09206888 SCPETLTHAVGMSES(ph)PIGPK ddPTM_A459_MK2206_30min_R1 3 SCPETLTHAVGMSESPIGPK 20 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 SCPETLTHAVGMS(0.261)ES(0.739)PIGPK;SCPETLTHAVGMS(0.02)ES(0.98)PIGPK;SCPETLTHAVGMS(0.007)ES(0.993)PIGPK 231.49 3.15E-24 76654000 18643.1 14606.7 14918.2 12106 16526.7 15684.1 17525.1 17371.3 14156.9 13254.3 TRUE FALSE 17057.40645 13655.80118 13905.59415 13038.40622 15868.40654 16572.12019 16356.03256 17219.42456 15628.56042 14896.34275 1.145073441 0.916721735 0.93349048 0.875275659 1.065255198 1.112495897 1.097989811 1.155949809 1.04915419 1 13.86267055 -6.443578808 7.180282821 1.09331892 0.96185756 0.337273538 0.076741752 0.275867092 21.71666529 0.023662633 0.02676085 3.60E-07 6.443578808 -0.13146136 SCPETLTHAVGMSES(ph)PIGPK ddPTM_A459_MK2206_30min_R2 5 SCPETLTHAVGMSESPIGPK 20 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 SCPETLTHAVGMS(0.147)ES(0.853)PIGPK;SCPETLTHAVGMS(0.377)ES(0.623)PIGPK;SCPETLTHAVGMS(0.082)ES(0.918)PIGPK;SCPETLTHAVGMS(0.062)ES(0.938)PIGPK;SCPETLTHAVGMS(0.111)ES(0.889)PIGPK 141.91 3.62E-05 98940000 488020 541593 473416 576578 650660 577103 743027 500729 562435 660360 TRUE FALSE 525383.1864 514698.2792 489199.4532 529469.733 625111.8191 599065.0591 645466.6624 566175.9996 611354.5797 638812.5073 0.822437226 0.805711024 0.765795046 0.828834325 0.97855288 0.937779164 1.010416445 0.886294481 0.957017235 1 19.28503303 -6.175417991 4.456579633 0.95722557 0.798952268 0.824571878 0.035343168 0.090636686 3.218428313 0.010460487 0.01363706 6.68E-07 6.175417991 -0.158273302 SCPS(ph)FSASSEGTR ddPTM_A459_MK2206_30min_R1 2 SCPSFSASSEGTR 13 0 D6RCP9;D6RFG8;P27707;D6RG38 D6RCP9 DCK Deoxycytidine kinase 1 SCPS(0.739)FS(0.174)AS(0.062)S(0.025)EGTR;S(0.004)CPS(0.988)FS(0.005)AS(0.003)SEGTR 133.98 0.001582 0 2412.7 2439.21 2140.09 2243.9 3237.9 3466.8 3800.6 3107.7 4447.9 3300.6 TRUE FALSE 2207.487195 2280.416986 1994.826653 2416.725567 3108.927587 3663.08722 3547.068909 3080.529707 4910.275122 3709.503246 0.595089706 0.614749964 0.537761129 0.651495741 0.83809809 0.987487266 0.956211297 0.83044265 1.32370153 1 11.85701029 -6.439717416 1.523222567 1.017729482 0.578304704 0.743372142 0.116855166 0.201667273 0.945980712 0.044999226 0.053125782 3.63E-07 6.439717416 -0.439424778 SCPS(ph)FSASSEGTR ddPTM_A459_MK2206_30min_R2 1 SCPSFSASSEGTR 13 0 D6RCP9;D6RFG8;P27707;D6RG38 D6RCP9 DCK Deoxycytidine kinase 1 S(0.014)CPS(0.97)FS(0.007)AS(0.007)S(0.002)EGTR 105.66 0.0096937 0 7376.8 11683 8604.2 8182.5 9699.8 8860.1 14235 8682.3 8297 8894.3 TRUE FALSE 7941.57348 11102.83921 8891.059734 7513.963575 9318.937114 9197.277314 12365.9274 9817.106421 9018.658062 8604.079719 0.923000918 1.29041566 1.033353946 0.873302412 1.083083539 1.068943759 1.437216739 1.140982736 1.048183926 1 13.07080518 -7.029046124 24.95060255 1.180449523 1.047928364 0.110548553 0.149630454 1395.446473 1198683.381 0.057612929 0.044707964 9.35E-08 7.029046124 -0.132521159 SCQGACGPS(ph)PPDQK ddPTM_A459_MK2206_30min_R1 2 SCQGACGPSPPDQK 14 0 P18754-2 P18754-2 RCC1 Regulator of chromosome condensation 1 SCQGACGPS(1)PPDQK;SCQGACGPS(1)PPDQK 150.76 0.00041473 4967500 2446.94 2512.2 2124.17 2187.83 1853.86 1982.72 1875.84 1987.79 1807.15 1793.39 TRUE FALSE 2238.814904 2348.655323 1979.987259 2356.337046 1780.016831 2094.979893 1750.706136 1970.410962 1995.009709 2015.568693 1.110760904 1.165256898 0.982346702 1.169068092 0.883133796 1.039398905 0.86859165 0.977595539 0.989799909 1 10.97697124 -6.259510252 24.99836164 0.958057275 1.102135814 0.528330751 0.068022536 135.5966673 1757109.021 0.019495237 0.023924738 5.50E-07 6.259510252 0.144078539 SCQGACGPS(ph)PPDQK ddPTM_A459_MK2206_30min_R2 2 SCQGACGPSPPDQK 14 0 P18754-2 P18754-2 RCC1 Regulator of chromosome condensation 1 SCQGACGPS(1)PPDQK;SCQGACGPS(1)PPDQK 174.18 9.06E-05 2459600 30252.5 34244 34215 33967.5 34045.9 25700.3 34768 30674.2 25470 34068.7 TRUE FALSE 32568.65466 32543.49276 35355.71102 31192.24659 32709.0869 26678.34293 30202.91984 34683.42326 27685.33456 32957.04111 0.988215373 0.987451897 1.072781713 0.94645167 0.992476442 0.809488414 0.916432993 1.052382802 0.840043087 1 15.0082991 -6.563820275 24.99980551 0.923656773 0.998991827 0.211352539 0.071366128 242.2668014 147931.9074 0.023415291 0.023415315 2.73E-07 6.563820275 0.075335054 SCS(ph)ASCVPHGAK ddPTM_A459_MK2206_30min_R2 2 SCSASCVPHGAK 12 0 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 S(0.001)CS(0.994)AS(0.005)CVPHGAK;S(0.003)CS(0.917)AS(0.08)CVPHGAK 133.88 0.0016794 3554700 16842.6 21849 16359.8 22620.3 20300.9 19867.8 13598.4 11256 17271.6 13633.2 TRUE FALSE 18132.08241 20764.01043 16905.22757 20772.14913 19503.78466 20623.88305 11812.91375 12727.19785 18773.85255 13188.3498 1.374856042 1.574420663 1.28183039 1.575037775 1.478864677 1.563795574 0.895708252 0.965033385 1.423517941 1 13.68697644 -7.25416978 24.99306417 1.068151007 1.475298594 0.613498426 0.156982865 373.9898359 1285789.045 0.059666811 0.045250539 5.57E-08 7.25416978 0.407147587 SCS(ph)FSSESR ddPTM_A459_MK2206_30min_R1 2 SCSFSSESR 9 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.001)CS(0.975)FS(0.023)S(0.001)ESR;S(0.001)CS(0.987)FS(0.01)S(0.003)ESR 147.3 0.0016532 54635000 7701.3 7063 6967.6 6471.1 7306.1 5979.2 6954.1 7101.9 5273 5072.5 TRUE FALSE 7046.263994 6603.197416 6494.658725 6969.505243 7015.082566 6317.737137 6490.204677 7039.808837 5821.14722 5700.919595 1.235987261 1.158268821 1.139230017 1.222522985 1.230517717 1.108196148 1.138448731 1.23485496 1.021089163 1 12.47697894 -8.280044678 18.98415355 1.010542103 1.180042076 0.707582141 0.044430457 23.27594738 23744.30185 0.042807388 0.011270572 5.25E-09 8.280044678 0.169499973 SCS(ph)FSSESR ddPTM_A459_MK2206_30min_R2 2 SCSFSSESR 9 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.006)CS(0.994)FSSESR;SCS(0.996)FS(0.004)SESR 178.54 0.00085917 100007000 67646 91315 67885 72384 78847 81033 74579 64830 71698 63548 TRUE FALSE 72825.02977 86780.42988 70148.25202 66469.99566 75751.07061 84116.7676 64786.68771 73303.50359 77934.16244 61474.43396 1.184639289 1.411650735 1.141096347 1.081262427 1.232236976 1.368321141 1.053880183 1.192422587 1.267749167 1 15.90769893 -14.03112021 0.257520322 5.76E-11 1.231807146 0.257190021 0.108171481 214.7775067 2.675507149 113.1659138 0.151208074 9.31E-15 14.03112021 1.231807146 SCS(ph)PELQQK ddPTM_A459_MK2206_30min_R2 2 SCSPELQQK 9 0 P16152 P16152 CBR1 Carbonyl reductase [NADPH] 1 1 S(0.002)CS(0.998)PELQQK;S(0.003)CS(0.997)PELQQK 121.36 0.0062865 21857000 98170 128059 111672 123817 101896 108130 117052 102429 101553 105332 TRUE FALSE 105685.9707 121699.7763 115395.0887 113700.755 97895.05105 112244.9629 101682.9318 115816.822 110385.8964 101895.0255 1.037204419 1.194364256 1.132489915 1.115861687 0.960744164 1.101574512 0.997918508 1.136628814 1.083329592 1 16.6367241 -6.029018283 24.86366686 1.052423378 1.12790766 0.252536942 0.061032948 884.1377635 757552.4489 0.017487675 0.022618672 9.35E-07 6.029018283 0.075484283 SCS(ph)PLAFSAFGDLTIK ddPTM_A459_MK2206_30min_R1 1 SCSPLAFSAFGDLTIK 16 0 E9PLZ8;Q96EY5;Q96EY5-2 E9PLZ8 MVB12A Multivesicular body subunit 12A 1 S(0.121)CS(0.879)PLAFSAFGDLTIK 137.52 0.00053587 0 420.43 479.21 589.56 437.94 496.37 342.84 462.37 424.13 322.21 303.81 TRUE FALSE 384.6702207 448.0133419 549.5423098 471.6702147 476.5985318 362.2513045 431.5261409 420.4218761 355.7048825 341.4482764 1.126584163 1.312097242 1.609445259 1.381381156 1.395814724 1.060925855 1.263811156 1.231290081 1.04175334 1 8.415523241 -6.751846606 24.99636862 1.143027657 1.376605113 0.448465071 0.134577542 208.2160791 542558.2562 0.04647321 0.04589493 1.77E-07 6.751846606 0.233577457 SCS(ph)PLAFSAFGDLTIK ddPTM_A459_MK2206_30min_R2 1 SCSPLAFSAFGDLTIK 16 0 E9PLZ8;Q96EY5;Q96EY5-2 E9PLZ8 MVB12A Multivesicular body subunit 12A 1 S(0.141)CS(0.859)PLAFSAFGDLTIK 126.07 0.0011525 1462500 2777.8 3395.5 3712.3 2176.2 3249.1 3159.7 4059.4 2069.3 3997.8 3817.7 TRUE FALSE 2990.470504 3226.884408 3836.066229 1998.397499 3121.524009 3279.944598 3526.395904 2339.764615 4345.521418 3693.128762 0.809739031 0.873753561 1.038703624 0.541112327 0.845224797 0.888120834 0.954853224 0.633545367 1.176650395 1 11.85062785 -8.276912677 24.99588588 1.088325218 0.82989755 0.356192425 0.142380581 1028.853963 1662015.544 0.131992483 0.034573642 5.29E-09 8.276912677 -0.258427668 SCSSPAVSAVSQLPLS(ph)PK ddPTM_A459_MK2206_30min_R1 1 SCSSPAVSAVSQLPLSPK 18 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 SCSSPAVSAVSQLPLS(1)PK 171.87 5.91E-08 17395000 4992.8 5775.9 5731 5342.3 3852.3 3135.1 4003.7 3876.1 4840.8 4301.2 TRUE FALSE 4568.136142 5399.88786 5341.995687 5753.764872 3698.854734 3312.606653 3736.620478 3842.211666 5344.018483 4834.065128 0.944988539 1.11704905 1.105073172 1.1902539 0.765164439 0.685263141 0.772976859 0.794820004 1.105491619 1 12.2390212 -6.265685221 24.99814281 0.831210405 1.092444017 0.438623254 0.128908111 321.8132176 1894729.251 0.040421521 0.047442476 5.42E-07 6.265685221 0.261233612 SCSSPAVSAVSQLPLS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SCSSPAVSAVSQLPLSPK 18 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 SCSSPAVSAVSQLPLS(1)PK;SCSSPAVSAVSQLPLS(1)PK 186.74 1.89E-10 24433000 137649 127353 129867 97824 124355 81057 145967 96478 88842 121412 TRUE FALSE 148187.5133 121028.8352 134196.701 89831.46628 119472.1979 84141.68093 126801.3576 109088.0059 96569.31657 117450.3364 1.261703609 1.030468187 1.142582517 0.764846394 1.017214608 0.716402213 1.079616811 0.928801136 0.822214048 1 16.84169132 -5.738523254 24.89544364 0.905388353 1.133473292 0.460949627 0.119114247 202.3724606 219849.9802 0.030544412 0.052858655 1.83E-06 5.738523254 0.228084939 SCT(ph)PSPDQISHR ddPTM_A459_MK2206_30min_R1 1 SCTPSPDQISHR 12 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.005)CT(0.845)PS(0.15)PDQISHR 138.2 0.0029475 10781000 3518.9 3716.1 3723.9 2951.1 4115.2 3967.4 4407 3646.1 3391.2 3606.4 TRUE FALSE 3219.599077 3474.181215 3471.132043 3178.394233 3951.28287 4192.030759 4113.017071 3614.222532 3743.727376 4053.188059 0.794337452 0.857147797 0.856395507 0.784171419 0.974858016 1.034255183 1.014760976 0.891698702 0.923650055 1 11.9848414 -6.271912752 24.54346424 0.972919193 0.827835703 0.730109457 0.044696477 325.4824051 762739.104 0.015155169 0.017376286 5.35E-07 6.271912752 -0.145083491 SCT(ph)PSPDQISHR ddPTM_A459_MK2206_30min_R2 2 SCTPSPDQISHR 12 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.001)CT(0.684)PS(0.315)PDQISHR;S(0.413)CT(0.43)PS(0.157)PDQISHR 174.72 0.00030733 48964000 112060 113191 107556 127989 143494 143073 135909 112209 121263 142468 TRUE FALSE 120639.3998 107570.0995 111141.8634 117531.8893 137859.7046 148517.7433 118063.985 126875.1016 131810.2365 137819.2808 0.875344865 0.780515606 0.806431892 0.852797145 1.00029331 1.077626747 0.856657968 0.920590362 0.956399103 1 17.07241821 -6.125951399 4.53154492 0.964018066 0.818560215 0.582098383 0.05830873 0.178786339 5.793418114 0.018630423 0.024556496 7.48E-07 6.125951399 -0.145457852 SCTPS(ph)PDQISHR ddPTM_A459_MK2206_30min_R1 3 SCTPSPDQISHR 12 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SCT(0.024)PS(0.976)PDQISHR;SCTPS(1)PDQISHR;S(0.012)CT(0.009)PS(0.979)PDQISHR 211.82 4.50E-06 46865000 10340.1 9428.6 9880.9 8622.1 10972.4 9877.9 9667.2 8456.5 8237.4 8245.8 TRUE FALSE 9460.620197 8814.796426 9210.212038 9286.175636 10535.34607 10437.17816 9022.318727 8382.565712 9093.707208 9267.351957 1.020854743 0.951166684 0.993834278 1.002031182 1.136823779 1.126230903 0.97355952 0.90452653 0.981262744 1 13.17794145 -7.502810156 24.80128617 0.953545378 1.036519632 0.274963962 0.058292515 960.0129728 1186413.457 0.027767527 0.018431499 3.14E-08 7.502810156 0.082974254 SCTPS(ph)PDQISHR ddPTM_A459_MK2206_30min_R2 5 SCTPSPDQISHR 12 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.001)CT(0.401)PS(0.599)PDQISHR;SCT(0.066)PS(0.934)PDQISHR;S(0.009)CT(0.007)PS(0.984)PDQISHR;SCT(0.079)PS(0.898)PDQIS(0.023)HR;SCT(0.012)PS(0.988)PDQISHR 185.95 0.00010723 152738000 198974 226127 195878 254436 223701 276927 234124 201683 201564 228746 TRUE FALSE 214207.6024 214897.862 202408.4748 233647.7649 214917.3747 287465.651 203383.2376 228043.6606 219095.6724 221282.0368 0.968029785 0.97114915 0.914708115 1.055882205 0.971237331 1.299091672 0.919113185 1.030556587 0.990119558 1 17.75552682 -5.77151694 24.95153189 1.042416693 0.953281028 0.143907504 0.09645368 373.5295429 924840.5469 0.026984145 0.04055604 1.69E-06 5.77151694 -0.089135664 SCTPSPDQIS(ph)HRASLEDAPVDDLTR ddPTM_A459_MK2206_30min_R1 1 SCTPSPDQISHRASLEDAPVDDLTR 25 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SCTPS(0.016)PDQIS(0.904)HRAS(0.08)LEDAPVDDLTR 105.22 1.82E-07 10662000 1353.3 1255.4 1349.2 1282.9 1483.5 1145.4 1106.3 1278.6 660.17 666.71 TRUE FALSE 1238.194729 1173.673232 1257.620063 1381.70918 1424.409054 1210.251558 1032.500746 1267.421335 728.7970339 749.3070682 1.652453021 1.566344803 1.678377419 1.843982579 1.900968393 1.615161006 1.377940753 1.691457867 0.972627998 1 9.54941325 -8.26207108 24.99543469 0.986313899 1.665427761 0.800830031 0.135551615 25.86971711 1023503.781 0.120670458 0.03829582 5.47E-09 8.26207108 0.679113861 SCTPSPDQISHRAS(ph)LEDAPVDDLTR ddPTM_A459_MK2206_30min_R1 2 SCTPSPDQISHRASLEDAPVDDLTR 25 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SCTPSPDQIS(0.402)HRAS(0.598)LEDAPVDDLTR;SCTPS(0.002)PDQIS(0.294)HRAS(0.703)LEDAPVDDLTR 85.881 5.14E-05 19536100 2195.92 1912.17 2111.8 2357.8 2662.1 1831.01 2179.4 2179.2 1897.57 1320.64 TRUE FALSE 2009.145473 1787.687385 1968.4569 2539.398165 2556.06292 1934.680204 2034.016203 2160.147484 2094.829192 1484.250854 1.353642794 1.204437499 1.326229252 1.710895539 1.722123261 1.303472522 1.370399214 1.455378974 1.411371391 1 10.53551923 -8.62238073 12.93147913 0.999999999 1.432626957 0.396730748 0.158726723 242.1046896 31466.58224 0.170601088 0.044051566 2.39E-09 8.62238073 0.432626959 SCTPSPDQISHRAS(ph)LEDAPVDDLTR ddPTM_A459_MK2206_30min_R2 4 SCTPSPDQISHRASLEDAPVDDLTR 25 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SCTPSPDQIS(0.008)HRAS(0.992)LEDAPVDDLTR;SCT(0.002)PS(0.008)PDQIS(0.149)HRAS(0.842)LEDAPVDDLTR;SCTPS(0.001)PDQIS(0.135)HRAS(0.864)LEDAPVDDLTR;S(0.001)CT(0.003)PS(0.019)PDQIS(0.221)HRAS(0.755)LEDAPVDDLT(0.001)R 109.83 1.14E-07 44855900 46157.7 110446 93810.7 111575.4 126893.1 130594.7 107017.1 80340.4 110555.1 74445.8 TRUE FALSE 49691.569 104961.4122 96938.30192 102459.3329 121910.6393 135564.5728 92965.62622 90841.16613 120170.9828 72016.63964 0.690001217 1.457460564 1.346054223 1.422717492 1.692812104 1.882406254 1.29089092 1.261391348 1.668655791 1 16.13604266 -4.761163149 7.500957632 1.46840008 0.677286072 0.4718421 0.239307899 0.088939409 35.61890507 0.059656176 0.356525036 1.73E-05 4.761163149 -0.791114008 SCTSATTSWGMRACS(ph)CS(ph)AKDS(ph)WT(ph)PS(ph)AAWK ddPTM_A459_MK2206_30min_R2 1 SCTSATTSWGMRACSCSAKDSWTPSAAWK 29 2 E9PMN0 E9PMN0 RNH1 5 S(0.005)CT(0.005)S(0.005)AT(0.005)T(0.005)S(0.006)WGMRACS(0.994)CS(0.994)AKDS(0.993)WT(0.993)PS(0.993)AAWK 52.321 0.007183 4536400 5416.1 6012.1 4572.1 5720.6 7096.8 5662 8826.2 5628.7 5451.5 7155 TRUE FALSE 5830.76078 5713.547856 4724.531532 5253.208681 6818.143973 5877.471378 7667.309338 6364.390416 5925.661616 6921.532936 0.842408876 0.825474344 0.682584563 0.758966074 0.985062707 0.849157467 1.107747288 0.919505906 0.856119832 1 12.75687588 -6.257790331 24.96781459 0.951459516 0.77402574 0.534434144 0.080249061 255.3576662 1747226.982 0.024473043 0.03036419 5.52E-07 6.257790331 -0.177433775 SCVEEPEPEPEAAEGDGDKKGNAEGS(ph)SDEEGKLVIDEPAK ddPTM_A459_MK2206_30min_R2 1 SCVEEPEPEPEAAEGDGDKKGNAEGSSDEEGKLVIDEPAK 40 3 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 S(0.001)CVEEPEPEPEAAEGDGDKKGNAEGS(0.499)S(0.499)DEEGKLVIDEPAK 42.863 0.011353 7871800 9495.8 13702 14616 11623 16464 9509.9 18603 13790 11413 12567 TRUE FALSE 10222.80575 13021.5786 15103.29015 10673.36372 15817.54064 9871.805908 16160.40375 15592.40035 12405.68211 12156.93982 0.840902884 1.071123062 1.242359539 0.877964675 1.301112029 0.812030499 1.329315107 1.282592542 1.02046093 1 13.56949249 -4.782783252 4.176393445 1.116648015 0.819309256 0.175260852 0.171883346 0.348036624 11.98056709 0.041067982 0.306462542 1.65E-05 4.782783252 -0.297338759 SCYDLSCHAR ddPTM_A459_MK2206_30min_R1 1 SCYDLSCHAR 10 0 P41250 P41250 GARS Glycine--tRNA ligase 0 145.99 0.0012365 4685700 4109.9 2251.6 2532.9 1779.8 5062.3 5063.6 4381 3636 2018.5 2235 FALSE TRUE 3760.331423 2105.020431 2360.973805 1916.880504 4860.657871 5350.296656 4088.751484 3604.210835 2228.330298 2511.888673 1.497013567 0.83802298 0.939919762 0.763123193 1.935061025 2.129989562 1.627759831 1.434860897 0.887113478 1 11.29455681 -6.252439101 24.94730315 1.561848239 0.992298658 0.261083488 0.398407604 827.1762407 2292796.317 0.124219105 0.157963657 5.59E-07 6.252439101 -0.569549581 SCYDLSCHAR ddPTM_A459_MK2206_30min_R2 1 SCYDLSCHAR 10 0 P41250 P41250 GARS Glycine--tRNA ligase 0 154.84 0.00076128 2913800 20767 37809 25745 45081 39077 39042 42392 30767 37502 30640 FALSE TRUE 22356.93749 35931.46004 26603.32545 41397.73809 37542.64063 40527.77067 36825.87948 34788.35254 40763.85617 29640.21931 0.75427706 1.212253515 0.897541451 1.396674487 1.266611432 1.367323576 1.242429386 1.17368742 1.375288615 1 14.8552685 -5.756358283 24.99994694 1.271504029 0.980446926 0.45493514 0.152161959 111.6455504 549308.9473 0.038869776 0.064768104 1.75E-06 5.756358283 -0.291057103 SDADSGFLGLRPT(ph)SVDPALRR ddPTM_A459_MK2206_30min_R1 2 SDADSGFLGLRPTSVDPALRR 21 2 Q9NZM5 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein 1 SDADSGFLGLRPT(0.5)S(0.5)VDPALRR;SDADSGFLGLRPT(0.5)S(0.5)VDPALRR 67.644 0.010805 11168700 3131.4 3005.1 3096.9 2838.3 3361.8 2874 3236.7 3279.7 2412.9 2065.37 TRUE FALSE 2865.057986 2809.467444 2886.691056 3056.906358 3227.892387 3036.723396 3020.785649 3251.025929 2663.72959 2321.243628 1.234277157 1.210328554 1.24359676 1.316926117 1.390587506 1.308231225 1.301365187 1.400553518 1.147544169 1 11.18068223 -8.519375963 5.081223548 1.000235351 1.298986415 0.73041575 0.058630744 0.079850638 8.111598342 0.062218856 0.016179196 3.02E-09 8.519375963 0.298751064 SDADSGFLGLRPT(ph)SVDPALRR ddPTM_A459_MK2206_30min_R2 2 SDADSGFLGLRPTSVDPALRR 21 2 Q9NZM5 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein 1 SDADSGFLGLRPT(0.5)S(0.5)VDPALRR;SDADS(0.002)GFLGLRPT(0.499)S(0.499)VDPALRR 61.957 0.021046 4924900 14894 25252 24894 23643 27554 27121 28123 19411.2 21004.5 23305 TRUE FALSE 16034.29609 23998.0224 25723.95354 21711.29127 26472.09151 28153.10866 24430.41632 21948.31049 22831.43344 22544.55976 0.711226844 1.06447066 1.141027095 0.963039044 1.174211952 1.248776155 1.083650183 0.97355241 1.012724741 1 14.46049172 -4.762352871 5.844739051 1.081249236 0.696522988 0.604327182 0.087840924 0.098760479 12.24815901 0.023340523 0.152819273 1.73E-05 4.762352871 -0.384726248 SDAEEDGGT(ph)VSQEEEDR ddPTM_A459_MK2206_30min_R2 1 SDAEEDGGTVSQEEEDR 17 0 P27824-3;P27824;P27824-2 P27824-3 CANX Calnexin 1 SDAEEDGGT(0.799)VS(0.201)QEEEDR 195.45 2.19E-07 5351000 15402 4392.3 5241.3 5376.4 3642.7 5645.8 12604 5752 6304.1 6341.9 TRUE FALSE 16581.18896 4174.184769 5416.042326 4937.130922 3499.669295 5860.654875 10949.07966 6503.80615 6852.419223 6134.964322 2.702736005 0.680392672 0.882815619 0.804752996 0.57044656 0.955287524 1.78470144 1.060121267 1.116945244 1 12.58283924 -4.755131842 24.99989035 0.988266075 2.702738845 0.732398768 0.311674972 120.6303154 478072.4429 0.085089705 0.776464584 1.76E-05 4.755131842 1.714472771 SDAEEDGGTVS(ph)QEEEDR ddPTM_A459_MK2206_30min_R1 2 SDAEEDGGTVSQEEEDR 17 0 P27824-3;P27824;P27824-2 P27824-3 CANX Calnexin 1 SDAEEDGGT(0.229)VS(0.771)QEEEDR;SDAEEDGGT(0.228)VS(0.772)QEEEDR 218.64 8.04E-12 7158400 1535.83 1393.18 956.48 779.89 1294.79 1472.98 1729.36 1024.01 2426.73 2532.4 TRUE FALSE 1405.199594 1302.483729 891.5568025 839.9572629 1243.215773 1556.378855 1613.99755 1015.057189 2678.997268 2846.132831 0.493722422 0.457632797 0.313252 0.295122299 0.436808767 0.546839852 0.567084407 0.356644348 0.94127626 1 11.47478728 -8.269056032 22.96649189 0.970638608 0.433935354 0.858445298 0.087265169 77.7611801 234463.8648 0.086411504 0.024232458 5.38E-09 8.269056032 -0.536703254 SDAEEDGGTVS(ph)QEEEDR ddPTM_A459_MK2206_30min_R2 1 SDAEEDGGTVSQEEEDR 17 0 P27824-3;P27824;P27824-2 P27824-3 CANX Calnexin 1 SDAEEDGGT(0.038)VS(0.962)QEEEDR 115.53 0.0016575 4759700 12315 2809.5 5103.5 3643.4 3090.1 4650.6 8959.9 5157.5 5346 4376.8 TRUE FALSE 13257.84587 2669.984315 5273.648143 3345.722565 2968.767147 4827.581842 7783.454367 5831.602958 5810.985417 4233.985374 3.131292316 0.630607827 1.245551809 0.790206453 0.701175579 1.140198044 1.838328119 1.377331862 1.372462326 1 12.04780057 SDAEEDGGTVS(ph)QEEEDRKPK ddPTM_A459_MK2206_30min_R1 3 SDAEEDGGTVSQEEEDRKPK 20 2 P27824-3;P27824;P27824-2 P27824-3 CANX Calnexin 1 S(0.001)DAEEDGGT(0.082)VS(0.917)QEEEDRKPK;SDAEEDGGT(0.009)VS(0.991)QEEEDRKPK;SDAEEDGGT(0.157)VS(0.843)QEEEDRKPK 109.85 0.00044063 22045000 6634.6 7442 4424.3 5596.2 5773.6 5016 6093.1 5917.5 8882.2 6193.3 TRUE FALSE 6070.29243 6957.524447 4123.990843 6027.220294 5543.625286 5300.001585 5686.640416 5865.763921 9805.536475 6960.572761 0.872096685 0.99956206 0.592478663 0.865908669 0.796432345 0.76143182 0.816978805 0.842712823 1.408725519 1 12.76499031 -8.174783342 7.572957363 1.202193366 0.81458498 0.574429875 0.132916984 0.169498278 12.89180509 0.085988279 0.032132375 6.69E-09 8.174783342 -0.387608386 SDAEEDGGTVS(ph)QEEEDRKPK ddPTM_A459_MK2206_30min_R2 4 SDAEEDGGTVSQEEEDRKPK 20 2 P27824-3;P27824;P27824-2 P27824-3 CANX Calnexin 1 SDAEEDGGT(0.058)VS(0.942)QEEEDRKPK;SDAEEDGGT(0.143)VS(0.857)QEEEDRKPK;SDAEEDGGT(0.23)VS(0.769)QEEEDRKPK;SDAEEDGGT(0.057)VS(0.943)QEEEDRKPK 71.091 0.011508 99379000 524385 183545 243663 178808 157445 186446 488851 205510 236797 281347 TRUE FALSE 564532.3188 174430.4222 251786.6028 164198.8144 151262.9182 193541.3332 424664.2765 232370.8626 257393.175 272166.6704 2.074215472 0.640895602 0.925119165 0.603302433 0.555773115 0.711113278 1.560309629 0.85378148 0.94571894 1 18.05413088 SDAGLES(ph)DTAMK ddPTM_A459_MK2206_30min_R1 4 SDAGLESDTAMK 12 0 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 SDAGLES(0.976)DT(0.024)AMK;SDAGLES(0.997)DT(0.003)AMK;SDAGLES(1)DTAMK;SDAGLES(0.921)DT(0.079)AMK 223.36 1.56E-08 78783900 14568.6 16843.7 15577.6 14874.4 12775 11598.6 12541.3 11738 13563.3 12082.1 TRUE FALSE 13329.46407 15747.17207 14520.23591 16020.02887 12266.1447 12255.30271 11704.69276 11635.3759 14973.25357 13578.92176 0.98162905 1.159677649 1.069321715 1.179771792 0.903322437 0.902523994 0.861975123 0.856870384 1.102683544 1 13.72908131 -6.273422528 24.94618317 0.92517479 1.100014285 0.456703182 0.084638364 601.2384877 1251638.41 0.025583921 0.029234177 5.33E-07 6.273422528 0.174839495 SDAGLES(ph)DTAMK ddPTM_A459_MK2206_30min_R2 4 SDAGLESDTAMK 12 0 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 SDAGLES(0.992)DT(0.008)AMK;S(0.001)DAGLES(0.92)DT(0.08)AMK;S(0.006)DAGLES(0.626)DT(0.368)AMK;SDAGLES(0.79)DT(0.21)AMK 174.94 0.00012235 107161200 364977 378768 344848 369187 348638 272249 521276 331920 240741 391912 TRUE FALSE 392919.9197 359958.9319 356345.0602 339023.2411 334948.7204 282609.6265 452831.835 375303.0837 261680.217 379123.9435 1.036389092 0.949449218 0.939917054 0.894227988 0.883480788 0.745428062 1.194416345 0.989921871 0.690223399 1 18.53231005 -4.619744782 1.627874759 0.918050705 1.118249782 0.070549264 0.131182304 4.987914015 9.380485745 0.036961548 1.78962531 2.40E-05 4.619744782 0.200199078 SDAGLES(ph)DTAMKK ddPTM_A459_MK2206_30min_R1 1 SDAGLESDTAMKK 13 1 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 SDAGLES(0.987)DT(0.012)AMKK 93.478 0.030638 5464800 1870.8 2131.3 1665.2 1826.1 1797 1600.1 1557.1 1838.5 1806 1300.1 TRUE FALSE 1711.678636 1992.551983 1552.170864 1966.746538 1725.421685 1690.696279 1453.2287 1822.426188 1993.740163 1461.166203 1.171446912 1.363672372 1.06228221 1.346011517 1.180852446 1.157086905 0.994567693 1.247240858 1.364485545 1 10.51290457 -6.505399892 23.69803942 1.159438356 1.236441098 0.084368888 0.128495572 1103.120411 1495626.151 0.040138866 0.044471329 3.12E-07 6.505399892 0.077002742 SDAGLESDT(ph)AMK ddPTM_A459_MK2206_30min_R1 1 SDAGLESDTAMK 12 0 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 SDAGLES(0.387)DT(0.613)AMK 180.84 0.00024328 55084000 4723.7 4392.6 3862.6 4267.2 3491 3285.5 3485.1 3749.6 3562.6 2943 TRUE FALSE 4321.92451 4106.640942 3600.417474 4595.860483 3351.946078 3471.522171 3252.615338 3716.817643 3932.945019 3307.601059 1.306664387 1.241576862 1.088528335 1.389484524 1.013407004 1.049558913 0.983375951 1.123720055 1.189062692 1 11.69156952 -6.282305281 24.9986454 1.061701431 1.243490552 0.529751111 0.090449481 700.7011355 839481.5065 0.028289832 0.032109115 5.22E-07 6.282305281 0.181789121 SDAGLESDT(ph)AMK ddPTM_A459_MK2206_30min_R2 2 SDAGLESDTAMK 12 0 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 SDAGLES(0.275)DT(0.725)AMK;SDAGLES(0.12)DT(0.88)AMK 149.82 0.001323 56210100 241738 230634 206750 210416 232680 152870 275322 248220 153037 232016 TRUE FALSE 260245.6471 219181.0509 213642.9418 193224.3397 223543.8141 158687.575 239171.8907 280663.2063 166347.8816 224445.3369 1.159505698 0.976545354 0.951870708 0.8608971 0.99598333 0.707021037 1.065613097 1.25047466 0.741150981 1 17.7760046 -10.46964413 15.07359786 0.999999967 0.968693804 0.003593824 0.160673851 0 0 0.153683196 0.03727365 3.39E-11 10.46964413 -0.031306164 SDASDMNS(ph)DTSPSCR ddPTM_A459_MK2206_30min_R2 1 SDASDMNSDTSPSCR 15 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(0.017)DAS(0.331)DMNS(0.357)DT(0.125)S(0.168)PS(0.001)CR 87.083 0.019023 5270300 19537 17054 13983 15441 18532 19575 19168 14563 17328 21448 TRUE FALSE 21032.76774 16207.12316 14449.18624 14179.42091 17804.34056 20319.94034 16651.21858 16466.4341 18835.15812 20748.15352 1.013717569 0.781135687 0.696408296 0.6834064 0.85811687 0.979361384 0.802539781 0.793633712 0.907799246 1 14.34069533 -6.50279591 24.12499915 0.88242523 0.783941931 0.169780472 0.104261284 946.5849132 1137109.473 0.033820978 0.037819731 3.14E-07 6.50279591 -0.098483299 SDASDMNSDTS(ph)PSCR ddPTM_A459_MK2206_30min_R1 1 SDASDMNSDTSPSCR 15 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 SDASDMNSDT(0.023)S(0.892)PS(0.085)CR 204.23 7.06E-06 6238500 1935.5 1761.8 1898.6 1779.6 2197 1774.7 2403 1809.4 2028.7 1681.8 TRUE FALSE 1770.875561 1647.1065 1769.728322 1916.6651 2109.488838 1875.18198 2242.700255 1793.580607 2239.590625 1890.154081 0.936894817 0.871413879 0.936287861 1.014025851 1.116040676 0.992078899 1.186517161 0.948907089 1.184871989 1 10.88428813 -5.827134076 2.602019341 1.070718099 0.904311319 0.462307651 0.075630227 0.223109738 3.071449363 0.020591374 0.035342745 1.49E-06 5.827134076 -0.16640678 SDATNYASHS(ph)PPVNR ddPTM_A459_MK2206_30min_R1 2 SDATNYASHSPPVNR 15 0 Q96FJ0;Q96FJ0-2 Q96FJ0 STAMBPL1 AMSH-like protease 1 SDATNYAS(0.001)HS(0.999)PPVNR;SDATNYAS(0.001)HS(0.999)PPVNR 111.11 0.0033357 15055000 5342.3 3478.3 4038.8 4695.2 4341.5 5242.6 5062.4 4917.3 3959.1 3834.6 TRUE FALSE 4887.909331 3251.862038 3764.657509 5056.825118 4168.568862 5539.431481 4724.696533 4874.308565 4370.662613 4309.659198 1.134175374 0.754552016 0.873539493 1.173370071 0.967261835 1.28535256 1.09630398 1.131019494 1.014155044 1 12.07335807 SDATNYASHS(ph)PPVNR ddPTM_A459_MK2206_30min_R2 2 SDATNYASHSPPVNR 15 0 Q96FJ0;Q96FJ0-2 Q96FJ0 STAMBPL1 AMSH-like protease 1 SDATNYAS(0.003)HS(0.997)PPVNR;SDATNYASHS(1)PPVNR 142.57 0.00038089 42098400 42355.6 48957.2 39269.5 57438.7 49311.2 49654.8 52256.5 52212 39323.4 49015.6 TRUE FALSE 45598.3773 46526.05664 40578.72553 52745.77447 47374.99452 51544.44821 45395.15878 59036.28767 42743.67825 47416.22499 0.961661906 0.981226503 0.855798317 1.112399279 0.999130457 1.087063515 0.957376063 1.245065116 0.901456796 1 15.53309319 -5.767502797 24.99956749 1.049837864 0.937728667 0.222058368 0.093921254 198.3613973 817850.5359 0.024490441 0.037397803 1.71E-06 5.767502797 -0.112109197 SDDS(ph)DEDEPCAISGK ddPTM_A459_MK2206_30min_R2 2 SDDSDEDEPCAISGK 15 0 Q96QB1-6;Q96QB1-4;Q96QB1-1;Q96QB1 Q96QB1-6 DLC1 Rho GTPase-activating protein 7 1 SDDS(1)DEDEPCAISGK;S(0.001)DDS(0.999)DEDEPCAISGK 173.19 3.40E-05 5125700 45854 43847 42972 39905 55613 42256 54443 48279 41508 58016 TRUE FALSE 49364.6175 41669.62174 44404.66503 36644.63385 53429.35419 43864.08169 47294.5687 54589.23107 45118.29081 56122.94267 0.879579993 0.742470365 0.791203435 0.652935005 0.952005573 0.781571308 0.842695811 0.972672288 0.803918837 1 15.77630303 -8.14917542 0.396999292 0.998956512 0.770534544 0.318522012 0.086141773 1.293892489 0.595291289 0.11240729 0.077543236 7.09E-09 8.14917542 -0.228421968 SDDT(ph)LDEEDSFVMK ddPTM_A459_MK2206_30min_R1 1 SDDTLDEEDSFVMK 14 0 P53355-4;P53355;P53355-3 P53355-4 DAPK1 Death-associated protein kinase 1 1 SDDT(1)LDEEDSFVMK 126.71 0.0029839 3242700 892.55 870.9 856.43 556.12 858.64 726.31 935.5 660.16 869.27 858.38 TRUE FALSE 816.6339355 814.2042517 798.2979178 598.9524588 824.4385506 767.4330445 873.0945019 654.3882907 959.6337272 964.7225948 0.846496122 0.843977591 0.827489604 0.620854598 0.854586132 0.795496082 0.905021305 0.678317575 0.994725046 1 9.913970346 -8.288912856 22.92571912 0.997362968 0.798804758 0.495212093 0.081080007 250.0278245 208634.4747 0.076399283 0.019758128 5.14E-09 8.288912856 -0.19855821 SDDYMPMS(ph)PASVSAPK ddPTM_A459_MK2206_30min_R1 2 SDDYMPMSPASVSAPK 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SDDYMPMS(0.989)PAS(0.011)VSAPK;SDDYMPMS(0.986)PAS(0.012)VS(0.002)APK 172.42 6.31E-06 20831100 8146 8887.4 7946.5 6541.18 7820.7 7045.9 7405.8 6757.6 6748.9 6029.3 TRUE FALSE 7453.139924 8308.828645 7407.11372 7044.982817 7509.184958 7444.832769 6911.772595 6698.519016 7450.472306 6776.255203 1.099890677 1.2261682 1.0930984 1.039657245 1.108161475 1.098664756 1.019998862 0.988528149 1.099497006 1 12.72627249 -5.62944506 0.385157061 1.015860928 1.210674401 0.414335314 0.050404117 3.014580931 0.571827432 0.048491542 0.256533079 2.35E-06 5.62944506 0.194813474 SDDYMPMS(ph)PASVSAPK ddPTM_A459_MK2206_30min_R2 2 SDDYMPMSPASVSAPK 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SDDYMPMS(0.998)PAS(0.002)VSAPK;S(0.02)DDY(0.049)MPMS(0.884)PAS(0.042)VS(0.005)APK 109.14 0.003022 11838900 132849 151697 141871 152284 123150 115314 153693 122487 107583 140305 TRUE FALSE 143020.0216 144163.9476 146600.9083 139841.9101 118314.5122 119702.3551 133512.9245 138496.4715 116940.3749 135726.8593 1.053734112 1.062162259 1.080117149 1.030318617 0.871710381 0.881935644 0.983688307 1.020405778 0.861586096 1 17.05034672 -6.076222244 5.845370622 0.937529323 1.06372145 0.572107435 0.051484053 0.17061316 10.07838869 0.015797193 0.020722133 8.39E-07 6.076222244 0.126192126 SDEEDEDS(ph)DFGEEQR ddPTM_A459_MK2206_30min_R2 1 SDEEDEDSDFGEEQR 15 0 Q5VW52;Q9HCL2 Q5VW52 GPAM "Glycerol-3-phosphate acyltransferase 1, mitochondrial" 1 SDEEDEDS(1)DFGEEQR 114.06 0.0026079 1966100 2510.9 3922.8 3628.3 4723.3 4197.3 3122.8 3547.9 2916.7 3458.8 5027.5 TRUE FALSE 2703.136435 3727.999456 3749.265711 4337.391281 4032.492912 3241.640342 3082.056468 3297.922705 3759.640172 4863.453087 0.555806006 0.766533446 0.770906112 0.891833684 0.829141937 0.666530608 0.633717734 0.678103118 0.773039259 1 12.24776529 -11.8022023 1.252977226 1.596988789 0.73333358 0.429364843 0.093456676 31492.19314 3888.448176 52749.50422 0.029047626 1.58E-12 11.8022023 -0.863655208 SDEGQLS(ph)PATR ddPTM_A459_MK2206_30min_R1 2 SDEGQLSPATR 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 SDEGQLS(1)PATR;SDEGQLS(0.999)PAT(0.001)R 206.46 1.75E-05 248930000 7649.6 7417.6 8102.6 6541.4 7529.4 6932.4 8706.8 7104.9 6767.1 6888.5 TRUE FALSE 6998.96135 6934.712892 7552.618087 7045.219761 7229.488054 7324.906497 8125.985258 7042.782608 7470.564261 7741.899386 0.904036723 0.895737925 0.975551052 0.910011796 0.933813228 0.946138167 1.049611323 0.909696995 0.964952383 1 12.91847184 -7.008114036 22.70164624 0.97701632 0.925935183 0.329625713 0.038268111 152.3654157 426293.2481 0.01393342 0.011709272 9.81E-08 7.008114036 -0.051081137 SDEGQLS(ph)PATR ddPTM_A459_MK2206_30min_R2 3 SDEGQLSPATR 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 SDEGQLS(0.787)PAT(0.213)R;SDEGQLS(0.992)PAT(0.008)R;SDEGQLS(0.961)PAT(0.039)R 110.15 0.008987 242773600 77592 109912 98272 113916 99604 97033 108075 85787 101068 89558 TRUE FALSE 83532.50318 104453.9299 101548.3394 104608.6984 95693.04649 100725.6588 93884.62268 96999.65545 109858.712 86635.72979 0.964180753 1.205668033 1.172130017 1.207454461 1.104544819 1.162634159 1.083670939 1.11962646 1.268053172 1 16.40267451 -10.91225088 16.12412302 1 1.144694627 0.22753253 0.079055664 0 0 0.073212838 0.017756721 1.22E-11 10.91225088 0.144694627 SDGAPASDS(ph)KPGSSEAAPSSK ddPTM_A459_MK2206_30min_R2 1 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 S(0.016)DGAPAS(0.198)DS(0.72)KPGS(0.011)S(0.049)EAAPS(0.004)S(0.001)K 76.744 0.0015135 42657000 22607 14876 15530 15793 13091 10963 25736 17308 16423 20355 TRUE FALSE 24337.8093 14137.27947 16047.76245 14502.66138 12576.98156 11380.20465 22356.83229 19570.21503 17851.44285 19690.81802 1.235997879 0.717963035 0.814987089 0.736518989 0.638723163 0.577944737 1.135393779 0.993875166 0.906587164 1 14.26523543 -7.27252806 24.81368507 1.008453617 0.776118038 0.279520541 0.174033041 907.5077138 2030765.84 0.073748744 0.050253663 5.34E-08 7.27252806 -0.232335579 SDGAPASDSKPGS(ph)SEAAPSSK ddPTM_A459_MK2206_30min_R1 1 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 SDGAPASDSKPGS(0.804)S(0.188)EAAPS(0.007)S(0.002)K 100.39 0.00015015 9152100 2480.1 2585 2357.5 2223.4 2263.6 2136.8 2739.8 2516.5 2949.3 2502.3 TRUE FALSE 2269.154471 2416.71603 2197.479468 2394.646653 2173.436019 2257.783769 2557.032941 2494.498506 3255.890289 2812.303815 0.806866761 0.859336753 0.781380538 0.851489316 0.77283116 0.802823563 0.909230691 0.886994674 1.157730638 1 11.45753674 -7.984329331 2.065994562 1.073751331 0.819439147 0.754683005 0.05562116 0.148735101 1.1702235 0.042740005 0.014559199 1.04E-08 7.984329331 -0.254312184 SDGAPASDSKPGS(ph)SEAAPSSK ddPTM_A459_MK2206_30min_R2 1 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 SDGAPAS(0.008)DS(0.135)KPGS(0.33)S(0.33)EAAPS(0.158)S(0.039)K 62.739 0.0078796 9122600 24448 18909 24493 17835 17530 14963 30090 24132 28051 29101 TRUE FALSE 26319.75768 17970.00656 25309.5844 16377.82345 16841.68412 15532.42745 26139.14686 27286.13526 30490.82528 28151.43675 0.934934792 0.63833355 0.89905125 0.581775758 0.598253093 0.551745461 0.928519105 0.969262617 1.083100147 1 14.78092093 -7.441152255 4.979244577 1.008475762 0.697387313 0.582610575 0.123597885 0.164327673 7.0832218 0.055455675 0.036149607 3.62E-08 7.441152255 -0.311088449 SDGAPASDSKPGSSEAAPS(ph)SK ddPTM_A459_MK2206_30min_R2 1 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 SDGAPASDSKPGS(0.185)S(0.034)EAAPS(0.649)S(0.132)K 122.68 3.98E-05 9053800 12911 12413 11983 9657.2 10185 8720.4 18037 13257 15887 13432 TRUE FALSE 13899.47609 11796.58847 12382.50724 8868.175868 9785.085724 9052.260933 15668.72023 14989.73542 17268.82254 12993.71494 1.069707636 0.907868806 0.952961281 0.682497339 0.753062982 0.696664578 1.205869169 1.153614304 1.329013498 1 13.66552634 -7.27457952 24.58427121 1.184925475 0.84021265 0.589825102 0.133944256 460.0427217 860703.3779 0.058495394 0.039714439 5.31E-08 7.27457952 -0.344712825 SDGEAKPEPSPS(ph)PR ddPTM_A459_MK2206_30min_R1 2 SDGEAKPEPSPSPR 14 1 P26358;K7EJL0;K7ERQ1;K7ENQ6 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 SDGEAKPEPS(0.235)PS(0.765)PR;SDGEAKPEPS(0.254)PS(0.745)PR 172.32 0.00059263 11204700 2949.15 3081.9 2688.08 2498.65 2199.99 2302.05 2823.97 2701.5 1863.26 2057.17 TRUE FALSE 2698.309306 2881.26775 2505.620619 2691.096456 2112.35974 2432.390082 2635.588114 2677.88107 2056.952545 2312.02775 1.167074792 1.246208117 1.083732935 1.163955085 0.91363944 1.052059207 1.139946574 1.158239156 0.889674678 1 11.174943 -5.653555119 1.662734599 1.044214652 1.202815382 0.335801077 0.090402133 0.480269597 2.648673541 0.028472467 0.070208843 2.22E-06 5.653555119 0.158600731 SDGEAKPEPSPS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SDGEAKPEPSPSPR 14 1 P26358;K7EJL0;K7ERQ1;K7ENQ6 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 SDGEAKPEPS(0.016)PS(0.984)PR 61.821 0.046367 30049000 39909 42180 44809 43567 48404 53125 51604 35736 35277 44879 TRUE FALSE 42964.46372 40085.40254 46302.9097 40007.43674 46503.41575 55146.7091 44828.33281 40406.8179 38345.32969 43414.60191 0.989631641 0.923316137 1.066528487 0.921520295 1.071146889 1.27023413 1.032563489 0.93071953 0.883235778 1 15.40589273 -7.750756813 6.753366409 0.929711512 1.041717452 0.188292507 0.095926724 0.244983628 50.95183547 0.052545411 0.028143273 1.78E-08 7.750756813 0.11200594 SDGIYIINLK ddPTM_A459_MK2206_30min_R1 1 SDGIYIINLK 10 0 C9J9K3;A0A0C4DG17;P08865;F8WD59 C9J9K3 RPSA 40S ribosomal protein SA 0 143.73 0.014648 46693000 6295.7 6175.4 6755.4 5120.8 5630.2 5653.6 6140.3 5497.5 6187 5797.9 FALSE TRUE 5760.217655 5773.380338 6296.86227 5515.204903 5405.937212 5973.701946 5730.691791 5449.435937 6830.16079 6516.187624 0.88398585 0.886005847 0.966341461 0.846385221 0.829616568 0.916747996 0.879454694 0.836292055 1.048183568 1 12.66981243 -8.266758912 24.99087654 1.024091802 0.881968028 0.678403 0.039508423 275.3796488 1293696.358 0.035166843 0.010129633 5.41E-09 8.266758912 -0.142123774 SDGS(ph)ENLCTPQQSR ddPTM_A459_MK2206_30min_R2 2 SDGSENLCTPQQSR 14 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 SDGS(1)ENLCTPQQSR;S(0.443)DGS(0.557)ENLCTPQQSR 116.58 0.0026295 27268000 37436 39867 42728 48558 41329 39197 47332 36255 38871 46121 TRUE FALSE 40302.12894 37887.26275 44152.53019 44590.65607 39706.2158 40688.6693 41117.25154 40993.65298 42251.92932 44616.07555 0.903309591 0.849184118 0.989610351 0.999430262 0.889953124 0.911973292 0.921579297 0.918809027 0.947011336 1 15.445276 -14.52287875 0.277511135 1.536372643 0.920835174 0.227420914 0.04200362 381.9506406 3.66776031 117.7941035 0.052695782 3.00E-15 14.52287875 -0.615537469 SDGSDTTEQESTNLPS(ph)PNK ddPTM_A459_MK2206_30min_R1 2 SDGSDTTEQESTNLPSPNK 19 0 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 SDGSDTTEQESTNLPS(1)PNK;SDGSDTTEQESTNLPS(1)PNK 276.38 5.17E-60 10208500 7694.5 8068.3 7686.3 6887.5 5786.5 4780.3 5825.5 6397 6464.4 6035.3 TRUE FALSE 7040.04237 7543.052204 7164.575371 7417.976443 5556.011452 5050.956455 5436.891524 6341.071703 7136.397513 6782.998528 1.037895311 1.112052755 1.056254891 1.093613158 0.819108456 0.744649499 0.801546912 0.934847867 1.052100702 1 12.72770746 -6.254265856 24.90181116 0.876890228 1.076268296 0.499179361 0.088978185 454.1827167 1576625.739 0.028640289 0.036181024 5.57E-07 6.254265856 0.199378068 SDGSDTTEQESTNLPS(ph)PNK ddPTM_A459_MK2206_30min_R2 3 SDGSDTTEQESTNLPSPNK 19 0 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 SDGSDTTEQESTNLPS(1)PNK;SDGSDTTEQESTNLPS(1)PNK;SDGSDTTEQESTNLPS(1)PNK 245.67 8.50E-31 29815600 175955 176336 174460 165201 166273 121082 190419 145616 128437 175509 TRUE FALSE 189426.2501 167579.4107 180276.4093 151703.5498 159744.2866 125689.8604 165416.7566 164648.5112 139608.2181 169782.1557 1.115701761 0.987026051 1.061810109 0.893518811 0.94087795 0.740300769 0.974288234 0.969763345 0.82227851 1 17.37332531 -5.762689397 24.99708116 0.902013035 1.048064004 0.427907796 0.078737411 31.36814907 627303.795 0.021484305 0.033970406 1.73E-06 5.762689397 0.146050969 SDGSENLCT(ph)PQQSR ddPTM_A459_MK2206_30min_R2 1 SDGSENLCTPQQSR 14 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 SDGSENLCT(0.998)PQQS(0.002)R 113.4 0.0077378 15888000 10769 13326 12440 13590 14858 11810 11975 8572.7 9206.4 9654.5 TRUE FALSE 11593.48292 12664.25022 12854.74339 12479.65353 14274.60026 12259.43783 10402.66812 9693.181324 10007.15603 9339.474456 1.241342109 1.35599174 1.376388302 1.336226528 1.528415794 1.312647503 1.113838703 1.037872245 1.071490273 1 13.18912565 -7.289894255 3.025877649 1.046362041 1.369970409 0.827569149 0.068544828 0.107747038 1.996475426 0.031874347 0.021286397 5.13E-08 7.289894255 0.323608369 SDGSGESAQPPEDSS(ph)PPASSESSSTR ddPTM_A459_MK2206_30min_R1 2 SDGSGESAQPPEDSSPPASSESSSTR 26 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 SDGSGESAQPPEDS(0.222)S(0.778)PPASSESSSTR;SDGSGESAQPPEDS(0.078)S(0.922)PPASSESSSTR 240.57 3.18E-46 11360500 2177.16 2261.13 2226.36 1665.43 2041.52 1725.98 2217.55 1642.78 1851.61 1762.12 TRUE FALSE 1991.981109 2113.930026 2075.240886 1793.701707 1960.201935 1823.703496 2069.621286 1628.417348 2044.091486 1980.424729 1.005835304 1.067412457 1.047876678 0.905715668 0.989788658 0.920864837 1.045039105 0.822256622 1.032148032 1 10.95159415 -5.741934639 24.99468456 0.9552245 1.04307863 0.251739717 0.063637893 296.6130861 380096.9466 0.015975483 0.027619512 1.81E-06 5.741934639 0.08785413 SDGSGESAQPPEDSS(ph)PPASSESSSTR ddPTM_A459_MK2206_30min_R2 1 SDGSGESAQPPEDSSPPASSESSSTR 26 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 SDGSGESAQPPEDS(0.06)S(0.94)PPASSESSSTR 148.8 2.01E-12 0 6675 10143 6561.9 9624 8701.5 9414.3 10365 6075.1 6838.8 8985.4 TRUE FALSE 7186.043132 9639.313369 6780.670471 8837.688414 8359.835388 9772.567783 9004.063049 6869.136429 7433.626462 8692.207134 0.826722491 1.108960385 0.780086158 1.016736978 0.9617621 1.124290716 1.035877644 0.790263776 0.855205858 1 13.08550684 -7.754197046 24.99623478 0.867051108 0.982890221 0.128899544 0.113805688 279.5791168 964950.389 0.053490499 0.030064276 1.76E-08 7.754197046 0.115839113 SDHTLT(ph)SPGGGGK ddPTM_A459_MK2206_30min_R1 1 SDHTLTSPGGGGK 13 0 C9J0Q5;Q9Y618;Q9Y618-4 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SDHT(0.188)LT(0.541)S(0.271)PGGGGK 122.39 0.0036128 0 2191 1234.9 1216.9 1343.8 2712.4 2213 1911.8 1675.2 1179.8 1160.3 TRUE FALSE 2004.643945 1154.507786 1134.300218 1447.299709 2604.359364 2338.298148 1784.26731 1660.553903 1302.444432 1304.046724 1.537248557 0.885327009 0.869830964 1.109852647 1.997136542 1.793109177 1.368254126 1.27338528 0.998771293 1 10.34877985 -4.471174221 22.34360759 1.285915992 5.130750882 0.046331321 0.360390455 1228.437322 578963.9126 0.097102419 20580.33675 3.38E-05 4.471174221 3.844834891 SDHTLTS(ph)PGGGGK ddPTM_A459_MK2206_30min_R1 2 SDHTLTSPGGGGK 13 0 C9J0Q5;Q9Y618;Q9Y618-4 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SDHT(0.001)LT(0.143)S(0.856)PGGGGK;SDHTLT(0.004)S(0.996)PGGGGK 171.99 0.00018727 47974000 25316 11046.7 13011.7 9974.7 27478 25858 23669 18643.3 10476.7 10079.5 TRUE FALSE 23162.74126 10327.55782 12128.50206 10742.95312 26383.49307 27322.05761 22090.0842 18480.30359 11565.79046 11328.22456 2.044692983 0.911666058 1.070644565 0.948335114 2.329005127 2.411856993 1.950004088 1.631350394 1.02097115 1 13.46763415 -6.244416388 24.88612291 1.801138773 1.207737628 0.153321332 0.53172649 1266.999487 1852241.704 0.162332819 0.209015399 5.70E-07 6.244416388 -0.593401144 SDHTLTS(ph)PGGGGK ddPTM_A459_MK2206_30min_R2 3 SDHTLTSPGGGGK 13 0 C9J0Q5;Q9Y618;Q9Y618-4 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SDHTLT(0.099)S(0.901)PGGGGK;SDHTLT(0.033)S(0.967)PGGGGK;SDHTLT(0.026)S(0.974)PGGGGK 110.55 0.0036749 98172000 147486 290024 191427 393280 375630 370250 374510 268447 304022 216075 TRUE FALSE 158777.6416 275621.8299 197809.0806 361147.766 360880.8788 384340.1232 325336.3871 303533.9446 330465.284 209024.4904 0.759612623 1.318610223 0.946344039 1.727777282 1.72650046 1.838732497 1.556451048 1.452145363 1.580988349 1 17.67331246 -5.758776566 24.99835793 1.592567286 1.039230994 0.492062991 0.251789069 55.17416529 517959.7339 0.066661818 0.109084429 1.74E-06 5.758776566 -0.553336292 SDHYTIQR ddPTM_A459_MK2206_30min_R2 2 SDHYTIQR 8 0 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;Q8WX93-4;Q8WX93-7;F8WA26 Q8WX93 PALLD Palladin 0 ; 131.06 0.0051472 4244000 39044 55561 44461 73816 80041 86205 70357 52647 69535 38294 FALSE TRUE 42033.23866 52801.92153 45943.30755 67784.99667 76898.18817 89485.59168 61119.04139 59528.14366 75583.02861 37044.46992 1.13466973 1.425365828 1.240220407 1.829827686 2.075834486 2.415626189 1.649883006 1.606937386 2.040332303 1 15.17697057 -5.771956114 10.49339746 1.858709011 1.282430594 0.312023208 0.357706105 0.253809396 236.3607081 0.098568148 0.152287267 1.69E-06 5.771956114 -0.576278417 SDIS(ph)PLTPR ddPTM_A459_MK2206_30min_R1 2 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.001)DIS(0.96)PLT(0.039)PR;S(0.001)DIS(0.997)PLT(0.001)PR 120.63 0.0065183 245094000 7115.8 7733 7829.1 6677.5 9098 7882.1 8048.2 7708.3 7055.9 7083.1 TRUE FALSE 6510.563843 7229.580294 7297.682505 7191.802207 8735.607395 8328.37769 7511.319263 7640.907146 7789.386055 7960.607903 0.817847572 0.908169374 0.916724275 0.903423745 1.09735431 1.046198706 0.943561014 0.959839655 0.97849136 1 12.95866289 -6.077641977 10.26516269 1.001344566 0.888007634 0.592704095 0.04792663 0.462081357 59.35556704 0.015399973 0.019903715 8.36E-07 6.077641977 -0.113336932 SDIS(ph)PLTPR ddPTM_A459_MK2206_30min_R2 2 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.436)DIS(0.564)PLT(0.001)PR;S(0.057)DIS(0.941)PLT(0.001)PR 90.149 0.028927 385130000 18346.8 33720 24398 28305 29447 26935 30071 19447.7 26061 28612 TRUE FALSE 19751.44511 32045.51383 25211.41714 25992.39096 28290.76282 27960.0303 26122.64158 21989.58116 28327.73867 27678.39278 0.713605203 1.157780876 0.910869982 0.939085992 1.02212448 1.010175357 0.943791852 0.794467415 1.02346039 1 14.75647255 -10.3787789 13.29809454 0.999998991 0.950717076 0.017101533 0.117986584 0 0 0.107355034 0.02603742 4.18E-11 10.3787789 -0.049281915 SDISPLT(ph)PR ddPTM_A459_MK2206_30min_R1 3 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SDISPLT(1)PR;SDISPLT(1)PR;SDISPLT(1)PR 110.84 0.024836 1134240000 17178.2 18225.9 17333.4 15418.5 15951 16459.3 15969 13166.9 11934 10617.8 TRUE FALSE 15717.10388 17039.3906 16156.8571 16606.03554 15315.63789 17391.21134 14903.73715 13051.78318 13174.58201 11933.21322 1.317089001 1.427896265 1.3539402 1.39158123 1.283446261 1.457378747 1.248929091 1.093735856 1.104026364 1 13.54269495 -7.639724377 2.693255885 1.064973165 1.3707343 0.865450135 0.053932372 0.089814732 1.307340472 0.029128104 0.014560729 2.29E-08 7.639724377 0.305761135 SDISPLT(ph)PR ddPTM_A459_MK2206_30min_R2 1 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SDIS(0.001)PLT(0.999)PR 108.31 0.028256 654870000 91605 108610 100520 124590 133260 118520 113260 79868 100390 99794 TRUE FALSE 98618.34923 103216.5853 103871.2866 114410.5985 128027.5428 123030.3617 98388.82595 90307.02183 109121.7407 96537.72995 1.021552395 1.069183887 1.075965705 1.185138686 1.326191769 1.274427747 1.019174845 0.935458311 1.130353291 1 16.55880528 -7.357622348 10.66927707 1.015452147 1.159683902 0.321069324 0.097808495 0.744216633 78.9722983 0.046019488 0.031002187 4.39E-08 7.357622348 0.144231755 SDKGS(ph)PGEDGFVPSALGTR ddPTM_A459_MK2206_30min_R2 2 SDKGSPGEDGFVPSALGTR 19 1 G3V238;A0A494BZY7;Q5JPI9 G3V238 METTL10 Protein-lysine N-methyltransferase METTL10 1 S(0.134)DKGS(0.866)PGEDGFVPSALGTR;S(0.064)DKGS(0.936)PGEDGFVPSALGTR 68.705 0.010313 11920200 28968.5 33373.2 33456 31017.5 36110 28849.2 34932.7 31868 28788.2 34703 TRUE FALSE 31186.35063 31715.93542 34571.40634 28483.27103 34692.13996 29947.07652 30345.99453 36033.25702 31292.1456 33570.64395 0.928976837 0.944752072 1.02981064 0.84845769 1.033407045 0.892061426 0.903944368 1.073356146 0.93212825 1 15.03491259 -7.739789215 24.9999065 1.002056748 0.942027665 0.169674768 0.062381039 401.631571 463773.4679 0.027853828 0.016062884 1.82E-08 7.739789215 -0.060029083 SDKNQQGFS(ph)PK ddPTM_A459_MK2206_30min_R1 2 SDKNQQGFSPK 11 1 C9JKA9;Q9NS87-4;Q9NS87-2;Q9NS87;D6RCT7 C9JKA9 KIF15 Kinesin-like protein KIF15;Kinesin-like protein 1 SDKNQQGFS(1)PK;SDKNQQGFS(1)PK 157.33 0.0026532 21968000 4994.7 5314.6 5594.6 5213.9 3239.8 2785.8 3614 3938.5 2946.9 3320.4 TRUE FALSE 4569.874537 4968.618574 5214.854139 5615.475481 3110.751906 2943.529589 3372.916654 3904.06611 3253.240801 3731.75622 1.224590854 1.331442431 1.397426261 1.5047809 0.83358926 0.788778638 0.903841638 1.046173941 0.871772058 1 11.86563903 -6.26677687 24.99954813 0.903563028 1.36454215 0.847652037 0.09494776 171.2063808 801889.1431 0.031171784 0.036364346 5.41E-07 6.26677687 0.460979122 SDKNQQGFS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SDKNQQGFSPK 11 1 C9JKA9;Q9NS87-4;Q9NS87-2;Q9NS87;D6RCT7 C9JKA9 KIF15 Kinesin-like protein KIF15;Kinesin-like protein 1 SDKNQQGFS(1)PK;SDKNQQGFS(1)PK 69.672 0.037642 60461200 138643 147380 170274 127765 166152 99565 173471 127377 115153 163435 TRUE FALSE 149257.6147 140061.3235 175950.8502 117326.1908 159628.0376 103354.0158 150694.0493 144025.6113 125168.7998 158102.1293 0.944058219 0.885891443 1.112893614 0.742091149 1.009651409 0.653716786 0.953143705 0.910965664 0.791695851 1 17.27049727 -5.768109389 24.99990764 0.862969659 0.971442127 0.161807933 0.119282667 283.8620827 1063948.893 0.031602243 0.048108045 1.71E-06 5.768109389 0.108472468 SDKS(ph)PDLAPTPAPQSTPR ddPTM_A459_MK2206_30min_R1 4 SDKSPDLAPTPAPQSTPR 18 1 F8WAE5;Q9BY44-4;Q9BY44-3;Q9BY44;Q9BY44-2 F8WAE5 EIF2A "Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed" 1 S(0.071)DKS(0.929)PDLAPTPAPQSTPR;S(0.013)DKS(0.987)PDLAPTPAPQSTPR;S(0.008)DKS(0.98)PDLAPT(0.013)PAPQSTPR;S(0.054)DKS(0.946)PDLAPTPAPQSTPR 229.37 4.17E-18 261919900 18185.7 20903.4 20501 17761.5 15571.2 13969.5 16017.1 17365.7 17743.6 15924 TRUE FALSE 16638.91072 19542.58486 19109.44924 19129.49381 14950.96613 14760.44102 14948.62848 17213.87352 19588.11072 17896.78534 0.929715052 1.091960622 1.067758755 1.068878765 0.835399534 0.824753761 0.835268916 0.961841649 1.094504423 1 14.12741285 -6.245804892 24.71468969 0.913858457 1.045332792 0.277493702 0.089009238 893.2614788 1412049.624 0.028009125 0.036030339 5.68E-07 6.245804892 0.131474335 SDKS(ph)PDLAPTPAPQSTPR ddPTM_A459_MK2206_30min_R2 7 SDKSPDLAPTPAPQSTPR 18 1 F8WAE5;Q9BY44-4;Q9BY44-3;Q9BY44;Q9BY44-2 F8WAE5 EIF2A "Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed" 1 S(0.169)DKS(0.831)PDLAPTPAPQSTPR;S(0.027)DKS(0.973)PDLAPTPAPQSTPR;S(0.211)DKS(0.789)PDLAPTPAPQSTPR;S(0.01)DKS(0.99)PDLAPTPAPQSTPR;S(0.015)DKS(0.985)PDLAPTPAPQSTPR;S(0.077)DKS(0.923)PDLAPTPAPQSTPR;S(0.165)DKS(0.835)PDLAPTPAPQSTPR 186.58 1.03E-10 1151203500 809762 915161 854265 823744 806696 597988 975582 740416 669463 942736 TRUE FALSE 871758.0013 869715.4355 882745.7687 756441.4802 775021.0617 620744.8524 847486.9115 837190.9134 727691.6816 911974.6015 0.955901623 0.953661905 0.967949949 0.829454547 0.849827463 0.680660241 0.929287844 0.917998058 0.797929767 1 19.79863412 -5.75793258 24.9529292 0.849718636 0.958620258 0.24382874 0.080851918 118.6558642 844289.2867 0.022177143 0.0365329 1.75E-06 5.75793258 0.108901622 SDLDYIRS(ph)PLPFQNR ddPTM_A459_MK2206_30min_R2 1 SDLDYIRSPLPFQNR 15 1 A0A0A0MRF6;Q99996-5;Q99996-3;Q99996;Q99996-1;Q99996-6;H7BYL6 A0A0A0MRF6 AKAP9 A-kinase anchor protein 9 1 SDLDYIRS(1)PLPFQNR 74.726 0.022014 6424900 30389 38230 35752 42468 32568 36775 37067 25259 32273 25281 TRUE FALSE 32715.60521 36331.55379 36943.95384 38998.22855 31289.21668 38174.49839 32200.05837 28560.43803 35080.0472 24456.08304 1.337728742 1.485583514 1.510624321 1.594622838 1.279404254 1.560940823 1.316648227 1.167825525 1.434409883 1 14.57790574 -8.936794962 0.388715447 0.961127742 1.486745462 0.540672654 0.120105279 1.662307002 0.51705927 0.267027072 0.094979366 1.16E-09 8.936794962 0.525617721 SDLNGLPS(ph)PVEER ddPTM_A459_MK2206_30min_R1 3 SDLNGLPSPVEER 13 0 E7EWN3;Q9C0A6 E7EWN3 SETD5 SET domain-containing protein 5 1 SDLNGLPS(1)PVEER;S(0.006)DLNGLPS(0.994)PVEER;S(0.005)DLNGLPS(0.995)PVEER 131.61 0.0015069 16441200 6577.1 6743.9 6752.5 5792.6 5726.1 5545.1 6236.2 5798.7 6204.8 5521.6 TRUE FALSE 6017.683107 6304.870884 6294.159114 6238.747056 5498.017312 5859.05877 5820.194477 5748.002577 6849.811164 6205.657494 0.969709191 1.015987571 1.014261441 1.00533216 0.88596854 0.944147945 0.937885225 0.926251986 1.103801035 1 12.59936836 -8.255595252 24.9980014 1.051900519 0.963407169 0.379367257 0.045754939 484.8711655 2074039.359 0.035081746 0.01247827 5.55E-09 8.255595252 -0.08849335 SDLNGLPS(ph)PVEER ddPTM_A459_MK2206_30min_R2 1 SDLNGLPSPVEER 13 0 E7EWN3;Q9C0A6 E7EWN3 SETD5 SET domain-containing protein 5 1 S(0.053)DLNGLPS(0.947)PVEER 99.238 0.011905 7867100 21650 21472 20874 27228 24584 18382 25546 19321 18821 24576 TRUE FALSE 23307.54065 20405.7317 21569.92874 25003.3853 23618.70864 19081.53989 22191.77951 21846.32104 20458.01656 23774.08713 0.98037584 0.858318201 0.90728736 1.051707481 0.993464376 0.802619246 0.933444022 0.918913139 0.860517438 1 14.53710233 SDPDGGDS(ph)PLPASGGPLTCK ddPTM_A459_MK2206_30min_R1 2 SDPDGGDSPLPASGGPLTCK 20 0 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 1 SDPDGGDS(0.97)PLPAS(0.03)GGPLTCK;SDPDGGDS(1)PLPASGGPLTCK 186.36 1.24E-15 28586000 5292.3 5585.8 5696.4 4585 5100.3 4842.6 5465.3 5263.6 4887.9 4773.9 TRUE FALSE 4842.162094 5222.163405 5309.744239 4938.137494 4897.144251 5116.783827 5100.719809 5217.5809 5396.014697 5365.326773 0.902491553 0.973316934 0.98964042 0.920379635 0.912739234 0.953676084 0.950682041 0.972462838 1.005719675 1 12.38945033 -7.978307858 1.933690065 1.003976823 0.943708735 0.47556803 0.025193867 0.340296706 2.330256387 0.022355436 0.007587296 1.05E-08 7.978307858 -0.060268088 SDPDGGDS(ph)PLPASGGPLTCK ddPTM_A459_MK2206_30min_R2 1 SDPDGGDSPLPASGGPLTCK 20 0 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 1 SDPDGGDS(0.989)PLPAS(0.011)GGPLTCK 154.55 3.40E-06 12671000 38487 40167 36603 42788 37828 28763 42135 30777 26187 44130 TRUE FALSE 41433.59431 38172.36519 37823.32575 39292.08353 36342.68265 29857.59612 36602.62389 34799.65957 28464.69792 42690.04171 0.970568138 0.894174933 0.8859988 0.920403962 0.851315229 0.699404239 0.857404266 0.815170428 0.666776063 1 15.38161195 -6.521549687 24.98912813 0.796642171 0.910333162 0.254846613 0.08734591 65.1564775 1225116.179 0.027110433 0.027475922 3.01E-07 6.521549687 0.113690991 SDPES(ph)PIKK ddPTM_A459_MK2206_30min_R1 2 SDPESPIKK 9 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7C0Q4 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.001)DPES(0.999)PIKK;S(0.001)DPES(0.999)PIKK 113.67 0.016126 87241000 11507.9 11559.7 10664.5 9794 8168.8 7068.1 8920.7 9327.5 8730.5 8537.8 TRUE FALSE 10529.09267 10807.16143 9940.623453 10548.33558 7843.419398 7468.289714 8325.61638 9245.950651 9638.066717 9595.527121 1.097291742 1.12627074 1.035964291 1.099297146 0.817403703 0.778309479 0.867655969 0.96356881 1.004433274 1 13.22814635 -6.248692008 24.62261623 0.895182399 1.088479075 0.607176705 0.072419893 457.5124105 883722.8658 0.02344319 0.03005203 5.64E-07 6.248692008 0.193296676 SDPYLEFHK ddPTM_A459_MK2206_30min_R2 1 SDPYLEFHK 9 0 O75131;A0A087WYQ3 O75131 CPNE3 Copine-3 0 117.31 0.0079311 0 14747 14561 14923 19030 18504 15900 16273 14530 17579 19053 FALSE TRUE 15876.04166 13837.92191 15420.52537 17475.18813 17777.43998 16505.08564 14136.33555 16429.12089 19107.98964 18431.30217 0.861362996 0.750783737 0.83664872 0.948125529 0.964524363 0.895492108 0.766974326 0.891370601 1.036714035 1 14.16987038 -1.522878745 0.073647524 1.125609653 0.311597656 0.326422752 0.073637192 312.3547864 1.697560061 3.109276448 26.15180927 0.03 1.522878745 -0.814011996 SDQMEPS(ph)PLASSLSDTNK ddPTM_A459_MK2206_30min_R2 1 SDQMEPSPLASSLSDTNK 18 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 S(0.109)DQMEPS(0.876)PLAS(0.001)S(0.005)LS(0.007)DT(0.002)NK 98.391 0.006126 0 6532.8 8021.2 8000.2 8867.9 5209.5 5038.1 8506.8 5950.2 6403.6 5576.6 TRUE FALSE 7032.956191 7622.878872 8266.922675 8143.364203 5004.948854 5229.828426 7389.846942 6727.91157 6960.573553 5394.635999 1.303694298 1.413047863 1.532433824 1.509529875 0.92776396 0.969449732 1.369850893 1.247148384 1.290276778 1 12.3973099 -6.240745639 24.98230827 1.149995899 1.444399967 0.508935291 0.146529596 771.0899716 930890.649 0.046997612 0.06060872 5.74E-07 6.240745639 0.294404068 SDS(ph)APPTPVNR ddPTM_A459_MK2206_30min_R2 1 SDSAPPTPVNR 11 0 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 S(0.346)DS(0.652)APPT(0.002)PVNR 139.76 0.001142 7207200 32949 48970 39446 44095 45274 41967 43039 29361 37760 40933 TRUE FALSE 35471.60077 46538.22101 40761.10995 40492.29745 43496.31528 43564.08359 37387.9276 33198.58351 41044.29655 39597.35956 0.895807225 1.175285967 1.029389596 1.022600949 1.098465043 1.100176478 0.944202543 0.838403971 1.036541249 1 15.27311661 -7.2766041 22.7888203 0.941320553 1.058678055 0.247246927 0.082884979 305.2757323 458749.4183 0.032912486 0.022318963 5.29E-08 7.2766041 0.117357502 SDS(ph)ASSEPVGIYQGFEK ddPTM_A459_MK2206_30min_R1 1 SDSASSEPVGIYQGFEK 17 0 Q05655;Q05655-2 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit 1 S(0.024)DS(0.937)AS(0.039)SEPVGIYQGFEK 232.62 1.64E-64 0 745.96 700.52 680.69 463.71 602.1 643.48 649.82 614.58 615.51 672.08 TRUE FALSE 682.5121848 654.9160207 634.4866593 499.4250245 578.117082 679.9132815 606.4716935 609.2067919 679.4944671 755.3423443 0.903579933 0.867045288 0.839998795 0.661190291 0.765370943 0.900139237 0.802909698 0.806530703 0.899584767 1 9.560986856 -8.542073729 2.708018701 0.999610598 0.815887341 0.419766857 0.06699954 0.284969455 5.131138592 0.069541218 0.018718259 2.87E-09 8.542073729 -0.183723257 SDS(ph)ASSEPVGIYQGFEK ddPTM_A459_MK2206_30min_R2 1 SDSASSEPVGIYQGFEK 17 0 Q05655;Q05655-2 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit 1 S(0.26)DS(0.739)ASSEPVGIYQGFEK 125.86 0.00096056 0 10321 8093.2 7247.1 6182.5 7097.5 6280.3 7981.5 6677.4 7356.1 7505.5 TRUE FALSE 11111.1837 7691.303457 7488.714697 5677.369973 6818.816488 6519.301217 6933.519462 7550.159107 7995.920281 7260.59615 1.530340411 1.059321204 1.031418708 0.781942675 0.939153803 0.897901644 0.954951814 1.03988143 1.101275999 1 12.82587229 -4.642704475 2.088816903 0.958948371 1.854891654 0.802068594 0.08323421 0.511752221 1.797896198 0.023674043 0.992926254 2.28E-05 4.642704475 0.895943283 SDS(ph)DSSTLAK ddPTM_A459_MK2206_30min_R1 1 SDSDSSTLAK 10 0 Q6AWC2-3;Q6AWC2-2;Q6AWC2-4;Q6AWC2;Q6AWC2-6;Q6AWC2-7 Q6AWC2-3 WWC2 Protein WWC2 1 S(0.01)DS(0.845)DS(0.001)S(0.001)T(0.144)LAK 103.31 0.011495 0 4004 3808.4 3558.4 2731.5 3233.9 2805.1 3689.1 3163.8 2115.3 2885 TRUE FALSE 3663.438774 3560.472468 3316.865722 2941.880603 3105.086915 2963.922338 3443.00687 3136.13923 2335.193005 3242.415581 1.129848622 1.098092573 1.02296132 0.907311395 0.957646186 0.914109331 1.061864769 0.967223094 0.720201636 1 11.6628533 -5.435003519 2.357356068 0.936810466 1.120850728 0.429472343 0.083800527 0.30255183 3.236785832 0.023901043 0.06324975 3.67E-06 5.435003519 0.184040263 SDS(ph)DSSTLAK ddPTM_A459_MK2206_30min_R2 1 SDSDSSTLAK 10 0 Q6AWC2-3;Q6AWC2-2;Q6AWC2-4;Q6AWC2;Q6AWC2-6;Q6AWC2-7 Q6AWC2-3 WWC2 Protein WWC2 1 S(0.103)DS(0.702)DS(0.047)S(0.067)T(0.081)LAK 100.04 0.017854 8665300 33940 37329 36553 42525 42752 27346 47985 34657 33744 41738 TRUE FALSE 36538.4725 35475.29614 37771.65878 39050.57147 41073.34167 28386.67119 41684.51186 39186.7889 36678.99212 40376.09248 0.90495316 0.878621332 0.935495647 0.967170647 1.017268863 0.703056424 1.032405795 0.970544362 0.908433429 1 15.30121368 -14.52287875 0.125727803 1.253928 0.891338136 0.072052128 0.086837094 450.8578294 3.605477917 28.7462626 0.732619737 3.00E-15 14.52287875 -0.362589864 SDS(ph)DSSTLPR ddPTM_A459_MK2206_30min_R1 1 SDSDSSTLPR 10 0 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 SDS(0.997)DS(0.001)S(0.001)TLPR 110.93 0.0091576 5797300 1952.1 2053.2 1813.5 1218 1956.7 1915.3 2262.2 2212.8 1434.5 1100.9 TRUE FALSE 1786.063644 1919.536307 1690.404673 1311.810571 1878.760496 2023.742631 2111.292766 2193.453723 1583.621408 1237.287803 1.443531278 1.551406473 1.366217842 1.060230746 1.518450671 1.635628045 1.706387762 1.772791841 1.279913537 1 10.27296541 -6.491616786 24.59980601 1.545412429 1.36002904 0.032612109 0.2423289 1242.451462 977676.4225 0.07443432 0.084300563 3.22E-07 6.491616786 -0.185383389 SDS(ph)DSSTLPR ddPTM_A459_MK2206_30min_R2 1 SDSDSSTLPR 10 0 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 S(0.016)DS(0.983)DS(0.001)STLPR 109.39 0.010099 34044000 77657 114290 114100 149430 127230 178670 116480 107600 153980 93362 TRUE FALSE 83602.47963 108614.5248 117904.0371 137221.091 122234.3109 185469.4121 101186.0361 121663.6894 167372.9021 90315.60559 0.925670365 1.202610823 1.305466938 1.519350838 1.353412958 2.053569932 1.120360489 1.347094875 1.853200241 1 16.46268767 -4.92862868 1.199245039 1.48495208 0.76944406 0.241512738 0.295680761 1.656288171 2.437110882 0.089018394 1.390781858 1.18E-05 4.92862868 -0.71550802 SDS(ph)DSSTLSK ddPTM_A459_MK2206_30min_R1 1 SDSDSSTLSK 10 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 S(0.1)DS(0.899)DS(0.001)STLSK 128.88 0.0030428 12553000 8955.2 7920.5 6689.1 6116.7 4973.5 4719.5 7995.1 8154.2 1911.5 4497 TRUE FALSE 8193.513214 7404.87401 6235.062529 6587.809294 4775.394963 4986.714011 7461.761467 8082.908689 2110.207265 5054.122311 1.621154517 1.465115713 1.233658813 1.303452685 0.944851484 0.986662709 1.476371367 1.599270495 0.417522002 1 12.30324486 -1.522878748 0.46079166 1.094395473 14.78049871 0.260834889 0.304931023 142.4313732 1.673644351 0.187511748 1846.402473 0.03 1.522878748 13.68610324 SDS(ph)DSSTLSK ddPTM_A459_MK2206_30min_R2 2 SDSDSSTLSK 10 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 S(0.197)DS(0.665)DS(0.097)S(0.021)T(0.021)LSK;S(0.058)DS(0.695)DS(0.243)S(0.002)T(0.002)LSK 103.44 0.014219 91527000 107071 104792 83172 91767 114710 76441 115085 110051 94393 124530 TRUE FALSE 115268.4381 99588.18166 85944.91297 84269.34255 110205.909 79350.01582 99974.20126 124435.0436 102603.1325 120466.5963 0.956849796 0.826687104 0.713433563 0.699524558 0.914825457 0.65868895 0.829891475 1.032942304 0.851714381 1 16.87827364 -7.608586915 6.564371827 0.955008581 0.789906138 0.368884948 0.097429079 0.23248711 14.57632556 0.04607422 0.026324549 2.46E-08 7.608586915 -0.165102443 SDS(ph)DTEGLLFSR ddPTM_A459_MK2206_30min_R1 1 SDSDTEGLLFSR 12 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(0.002)DS(0.899)DT(0.099)EGLLFSR 121.45 0.0037842 3188800 713.35 837.32 1168.3 695.45 754.59 686.6 1013.1 906.73 825.67 940.52 TRUE FALSE 652.6758365 782.8103158 1088.999051 749.0136795 724.5330824 725.4746987 945.5179475 898.8025552 911.5013512 1057.038718 0.617456887 0.740569198 1.030235726 0.708596257 0.685436654 0.68632746 0.894496986 0.850302396 0.862315954 1 10.04581251 -8.304812967 0.787723825 0.991810739 0.757992656 0.324485602 0.109972444 0.828276451 1.135375984 0.111988517 0.043345109 4.96E-09 8.304812967 -0.233818083 SDS(ph)DTEGLLFSR ddPTM_A459_MK2206_30min_R2 2 SDSDTEGLLFSR 12 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(0.001)DS(0.929)DT(0.071)EGLLFSR;S(0.002)DS(0.993)DT(0.005)EGLLFSR 109.44 0.0083105 0 11407.6 12092.4 9433.3 10997.7 10897.9 9756.7 10670.9 8111.3 10514.9 11343.7 TRUE FALSE 12280.97463 11491.909 9747.801514 10099.15273 10469.99369 10127.99806 9269.798012 9171.47476 11429.467 10973.556 1.119142658 1.047236557 0.888299246 0.920317236 0.954111292 0.922945858 0.844739664 0.835779647 1.041546332 1 13.42174349 -5.089238522 3.454243011 0.918054242 1.109912657 0.527459912 0.060694729 0.173442996 3.787534872 0.015702579 0.05610829 8.14E-06 5.089238522 0.191858414 SDS(ph)DYDLSPK ddPTM_A459_MK2206_30min_R1 2 SDSDYDLSPK 10 0 A0A1B0GW84;Q08499-11;Q08499-2;Q08499-10;A0A087WSZ7;Q08499;A0A1W2PQN6;Q08499-6;Q08499-7;Q08499-12;Q08499-9;Q07343-3;Q07343;E9PMG3 A0A1B0GW84;Q08499-6;Q08499-9;Q07343-3 PDE4D;PDE4B "cAMP-specific 3,5-cyclic phosphodiesterase 4D;cAMP-specific 3,5-cyclic phosphodiesterase 4B" 1 S(0.002)DS(0.998)DYDLSPK;S(0.001)DS(0.999)DYDLSPK 215.08 0.00036703 15402500 14506.7 14760.3 14162.8 13803 11976.6 9517.3 12435.1 11766.5 13784.8 12571.4 TRUE FALSE 13272.82899 13799.40179 13201.4686 14866.10945 11499.54666 10056.1613 11605.57717 11663.62673 15217.77929 14128.83994 0.939413925 0.976683284 0.934363235 1.052181886 0.813905933 0.711747132 0.821410478 0.825519065 1.077072099 1 13.7863554 -6.273148707 24.84839782 0.855382039 0.972783825 0.175597808 0.101669521 1059.278125 2247892.598 0.032142255 0.036742853 5.33E-07 6.273148707 0.117401786 SDS(ph)DYDLSPK ddPTM_A459_MK2206_30min_R2 2 SDSDYDLSPK 10 0 A0A1B0GW84;Q08499-11;Q08499-2;Q08499-10;A0A087WSZ7;Q08499;A0A1W2PQN6;Q08499-6;Q08499-7;Q08499-12;Q08499-9;Q07343-3;Q07343;E9PMG3 A0A1B0GW84;Q08499-6;Q08499-9;Q07343-3 PDE4D;PDE4B "cAMP-specific 3,5-cyclic phosphodiesterase 4D;cAMP-specific 3,5-cyclic phosphodiesterase 4B" 1 S(0.006)DS(0.994)DYDLSPK;S(0.227)DS(0.773)DYDLSPK 199.8 0.00018531 46440000 352160 432320 357030 319320 317020 260780 380640 296650 275850 340670 TRUE FALSE 379121.6404 410851.6175 368933.202 293230.5345 304572.2019 270704.1656 330661.5108 335423.1736 299842.9344 329553.9658 1.150408369 1.246689951 1.119492527 0.889780021 0.924195226 0.821425908 1.003360739 1.01780955 0.909844716 1 18.33015521 -5.623012964 4.333811891 0.936572513 1.195839123 0.763495589 0.060606132 0.098568671 3.285974499 0.017401051 0.03141289 2.38E-06 5.623012964 0.25926661 SDS(ph)FENPVLQQHFR ddPTM_A459_MK2206_30min_R1 2 SDSFENPVLQQHFR 14 0 P12956;B1AHC9;P12956-2 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 S(0.231)DS(0.769)FENPVLQQHFR;S(0.078)DS(0.922)FENPVLQQHFR 186.75 5.03E-05 20305700 6159.2 7936 7515.5 6367.5 6638.1 8432.7 5000.4 6170.2 6374.1 4704.8 TRUE FALSE 5635.327697 7419.364958 7005.368799 6857.925953 6373.690421 8910.152187 4666.83244 6116.254592 7036.710505 5287.666143 1.065749528 1.403145501 1.324850815 1.296966519 1.205388209 1.685082217 0.882588332 1.156702111 1.330778138 1 12.36841537 -8.783637163 0.476294472 0.998478083 1.304009453 0.130204215 0.201543862 2.994528048 1.477363092 0.288905507 0.116933117 1.65E-09 8.783637163 0.305531369 SDS(ph)FENPVLQQHFR ddPTM_A459_MK2206_30min_R2 4 SDSFENPVLQQHFR 14 0 P12956;B1AHC9;P12956-2 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 S(0.046)DS(0.954)FENPVLQQHFR;S(0.177)DS(0.823)FENPVLQQHFR;S(0.144)DS(0.856)FENPVLQQHFR;S(0.434)DS(0.566)FENPVLQQHFR 191.51 7.07E-05 46611400 65643 105367 78540.6 98580 92146 116229 104443 131579 191839 71495 TRUE FALSE 70668.67855 100134.628 81159.1044 90525.69866 88527.88504 120652.176 90729.50864 148776.8271 208524.8095 69162.12401 1.021782942 1.44782465 1.173461711 1.308891246 1.280005296 1.744483383 1.31183809 2.151131551 3.015014539 1 16.07769456 -7.770172896 8.289961983 2.190221269 1.338728769 0.305523905 0.490668953 0.13778088 69.03299094 0.24041797 0.122907058 1.70E-08 7.770172896 -0.8514925 SDS(ph)GGSSSEPFDR ddPTM_A459_MK2206_30min_R1 1 SDSGGSSSEPFDR 13 0 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 SDS(0.998)GGS(0.001)SSEPFDR 146.67 0.00059393 8365400 752.14 771.55 903.52 733.6 910.08 605.1 933.28 720.07 757.12 838.21 TRUE FALSE 688.1665434 721.3219548 842.1915798 790.1019991 873.8295865 639.3602391 871.0225941 713.7745039 835.8253334 942.053783 0.730496025 0.765690843 0.893995221 0.838701583 0.927579298 0.678687619 0.924599646 0.757679144 0.887237383 1 9.879665617 -14.52287875 0.207878516 1.834625037 0.798115751 0.325556115 0.08041706 179.2359928 1.779451987 62.30494602 0.171170041 3.00E-15 14.52287875 -1.036509286 SDS(ph)GGSSSEPFDR ddPTM_A459_MK2206_30min_R2 2 SDSGGSSSEPFDR 13 0 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 S(0.002)DS(0.993)GGS(0.001)S(0.002)S(0.002)EPFDR;S(0.034)DS(0.84)GGS(0.12)S(0.003)S(0.003)EPFDR 146.67 0.00059393 46432000 41294 53296 42500 47965 44296 56263 46774 41011 46574 47132 TRUE FALSE 44455.50039 50649.39814 43916.92879 44046.10607 42556.71647 58404.12789 40632.51761 46371.27851 50624.92233 45594.0867 0.975027764 1.110876471 0.963215451 0.966048654 0.933382365 1.28095839 0.891179549 1.017045891 1.110339651 1 15.47655911 SDS(ph)LILDHQWELEK ddPTM_A459_MK2206_30min_R1 4 SDSLILDHQWELEK 14 0 A0A3B3ITK3;A0A3F2YNW9;A0A3B3IUA1;A0A3B3IU40;A0A3B3IT28;A0A3B3ITE5;A0A3B3ITF7;A0A3B3ITW6;Q12756;Q12756-3;Q12756-2;H7C3Y8 A0A3B3ITK3 KIF1A Kinesin-like protein KIF1A 1 S(0.164)DS(0.836)LILDHQWELEK;S(0.179)DS(0.821)LILDHQWELEK;S(0.057)DS(0.943)LILDHQWELEK;S(0.177)DS(0.823)LILDHQWELEK 139.49 0.00037717 13067400 8085.1 8284.5 9280.3 7481.2 7313.5 7068.2 8213.1 8534.2 7821.3 6953.4 TRUE FALSE 7397.419788 7745.177544 8650.379092 8057.40332 7022.187808 7468.395376 7665.219085 8459.586389 8634.352124 7814.839687 0.946586249 0.991085915 1.106917024 1.031038849 0.898570935 0.955668405 0.980854297 1.08250287 1.104866187 1 12.93200056 -7.759709959 24.99502017 1.070263409 0.989055615 0.260628032 0.057545829 63.82644597 922518.1825 0.031231842 0.016831044 1.74E-08 7.759709959 -0.081207794 SDS(ph)LILDHQWELEK ddPTM_A459_MK2206_30min_R2 1 SDSLILDHQWELEK 14 0 A0A3B3ITK3;A0A3F2YNW9;A0A3B3IUA1;A0A3B3IU40;A0A3B3IT28;A0A3B3ITE5;A0A3B3ITF7;A0A3B3ITW6;Q12756;Q12756-3;Q12756-2;H7C3Y8 A0A3B3ITK3 KIF1A Kinesin-like protein KIF1A 1 S(0.171)DS(0.829)LILDHQWELEK 119.96 0.001413 1691800 11209 13246 11107 12253 12755 12034 14142 9493.4 10148 11395 TRUE FALSE 12067.16966 12588.2229 11477.30184 11251.8907 12254.17461 12491.9623 12285.13841 10734.21998 11030.6547 11023.18208 1.094708367 1.141977226 1.041196793 1.020747967 1.111673065 1.133244666 1.114482036 0.973785963 1.0006779 1 13.42825313 -7.763014055 24.99997957 0.990423927 1.093189623 0.625542205 0.036340984 30.16225205 478832.3811 0.020646901 0.010749376 1.73E-08 7.763014055 0.102765696 SDS(ph)LLSFR ddPTM_A459_MK2206_30min_R1 4 SDSLLSFR 8 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.012)DS(0.987)LLS(0.001)FR;S(0.133)DS(0.867)LLSFR;S(0.012)DS(0.988)LLSFR;S(0.013)DS(0.985)LLS(0.002)FR 180.09 0.00039816 42763700 12923.3 13357.7 13114.4 10741.7 13019.1 12076.2 12652.3 11870.1 11921.2 11703 TRUE FALSE 11824.10547 12488.1113 12224.23107 11569.0276 12500.52168 12759.94401 11808.28815 11766.32097 13160.4514 13152.85599 0.898976274 0.949460049 0.929397469 0.879582929 0.950403599 0.97012725 0.897773697 0.894582969 1.000577472 1 13.68308848 -8.274898229 24.51301576 1.000288769 0.922921924 0.566753729 0.027599185 530.4087272 966037.153 0.026856019 0.007100102 5.31E-09 8.274898229 -0.077366845 SDS(ph)LLSFR ddPTM_A459_MK2206_30min_R2 3 SDSLLSFR 8 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.148)DS(0.852)LLSFR;S(0.06)DS(0.94)LLSFR;S(0.004)DS(0.996)LLSFR 157.66 0.000532 15465300 41821 39546 40098 47514 48244 42507 50099 36209.5 33776.3 45539 TRUE FALSE 45022.84791 37582.20315 41434.84731 43631.95421 46349.69815 44124.63367 43520.94112 40942.20598 36714.10152 44053.06616 1.022013945 0.853112086 0.940566706 0.990440803 1.052133306 1.001624575 0.987920817 0.929383799 0.833406269 1 15.42695482 -7.906006405 5.101451469 0.905936596 0.975917723 0.144732598 0.062810551 0.365635325 15.37010505 0.037306981 0.017261901 1.24E-08 7.906006405 0.069981128 SDS(ph)PEIPFQAAAGPSDGLDASSPGNSFVGLR ddPTM_A459_MK2206_30min_R1 2 SDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 31 0 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.04)DS(0.96)PEIPFQAAAGPSDGLDASSPGNSFVGLR;S(0.193)DS(0.807)PEIPFQAAAGPSDGLDASSPGNSFVGLR 177.06 8.04E-34 22855000 1534.87 1811.88 1939.12 1515.72 1614.77 1474.29 2023.3 1713.95 1704.95 2139.23 TRUE FALSE 1404.321247 1693.926283 1807.497937 1632.461017 1550.450292 1557.763026 1888.329349 1698.965116 1882.185654 2404.253963 0.584098547 0.704553807 0.751791602 0.678988594 0.644877919 0.6479195 0.785411765 0.706649606 0.782856422 1 11.23137358 -9.278065445 0.489523854 1.026162306 0.670409922 0.791217871 0.04969544 1.339948951 0.482559794 0.121723358 0.027200631 5.27E-10 9.278065445 -0.355752384 SDS(ph)PEIPFQAAAGPSDGLDASSPGNSFVGLR ddPTM_A459_MK2206_30min_R2 1 SDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 31 0 A6NNK5;Q12888;Q12888-3;Q12888-2 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.229)DS(0.771)PEIPFQAAAGPSDGLDASSPGNSFVGLR 129.94 2.03E-16 0 16247 17897 15753 19708 16811 14008 13931 13555 14601 17295 TRUE FALSE 17490.88281 17008.261 16278.19716 18097.79336 16150.91567 14541.08426 12101.84297 15326.68504 15870.96859 16730.66557 1.045438554 1.016592014 0.972955744 1.081713892 0.965348067 0.869127663 0.723333027 0.916083403 0.948615494 1 14.03020722 -6.597234973 3.955768503 0.876315556 1.02451538 0.438844429 0.072268415 0.202330865 6.236495935 0.025191565 0.025435385 2.53E-07 6.597234973 0.148199824 SDS(ph)PENKYSDSTGHSK ddPTM_A459_MK2206_30min_R2 3 SDSPENKYSDSTGHSK 16 1 Q9BTA9-5;Q9BTA9;A0A0A0MRT2;Q9BTA9-2;A0A494C0S5;E9PMZ7;C9JMU2;A0A494C0B7;A0A494C0C1;C9JVK6;C9JD58;J3QTA0;Q9BTA9-3 Q9BTA9-5 WAC WW domain-containing adapter protein with coiled-coil 1 S(0.028)DS(0.616)PENKY(0.332)S(0.024)DSTGHSK;S(0.044)DS(0.496)PENKY(0.006)S(0.042)DS(0.007)T(0.007)GHS(0.397)K;S(0.157)DS(0.509)PENKY(0.234)S(0.048)DS(0.026)T(0.026)GHSK 89.466 0.0072221 13339100 20330.6 51352.1 42533.9 53771 73410 54321.5 59895 39897.2 54426 37333 TRUE FALSE 21887.12637 48802.02939 43951.959 49377.7373 70527.55454 56388.74275 52030.71455 45111.90103 59159.8751 36114.82727 0.606042671 1.351301753 1.217005931 1.367242793 1.952869773 1.561373735 1.440702296 1.249124098 1.638104889 1 15.14030365 -4.580625538 1.539562231 1.469561986 1.10E-16 0.486261252 0.248513381 1.603174994 2.458573488 0.070146447 4.137951263 2.63E-05 4.580625538 -1.469561986 SDS(ph)PSVGETER ddPTM_A459_MK2206_30min_R2 1 SDSPSVGETER 11 0 Q9BWT3-2;Q9BWT3;A0A0C4DH56 Q9BWT3-2 PAPOLG Poly(A) polymerase gamma 1 S(0.02)DS(0.979)PS(0.002)VGETER 106.26 0.011224 8198100 40340 43081 42506 42205 38528 39459 48850 30854 40081 43590 TRUE FALSE 43428.46142 40941.66019 43923.12883 38756.71649 37015.19713 40960.6399 42435.93632 34886.72374 43567.17293 42167.66187 1.029899679 0.970925547 1.041630645 0.919109924 0.877810044 0.971375649 1.00636209 0.827333606 1.033189202 1 15.36384941 -5.766395898 24.99966459 0.941184286 1.009829318 0.191070763 0.061218512 185.3453255 934849.3845 0.016491437 0.025357052 1.71E-06 5.766395898 0.068645032 SDS(ph)PVPTAPTSGGPK ddPTM_A459_MK2206_30min_R1 2 SDSPVPTAPTSGGPK 15 0 B4E349;F5H6D8;B4DTN4;Q86U44 B4E349 METTL3 N6-adenosine-methyltransferase 70 kDa subunit 1 S(0.007)DS(0.992)PVPTAPTSGGPK;S(0.012)DS(0.983)PVPT(0.005)APTSGGPK 205.28 3.77E-06 12573200 4811 4603.3 5487.9 3988.3 4422.9 4510.9 5467.6 4933.6 6461.8 7023 TRUE FALSE 4401.799186 4303.624333 5115.396638 4295.479557 4246.726527 4766.30326 5102.86638 4890.466055 7133.527234 7893.062261 0.557679522 0.545241402 0.648087709 0.544209511 0.538032818 0.603859833 0.646500206 0.619590457 0.903771819 1 12.94636941 -8.318523733 2.187837136 1.004729332 0.581142721 0.937232186 0.038164563 0.068333244 0.618843594 0.037514831 0.01068711 4.80E-09 8.318523733 -0.423586611 SDS(ph)PVPTAPTSGGPK ddPTM_A459_MK2206_30min_R2 2 SDSPVPTAPTSGGPK 15 0 B4E349;F5H6D8;B4DTN4;Q86U44 B4E349 METTL3 N6-adenosine-methyltransferase 70 kDa subunit 1 S(0.078)DS(0.922)PVPTAPTSGGPK;S(0.078)DS(0.922)PVPTAPTSGGPK 214.89 2.25E-07 17908800 105283 75830 80765 91266 75454 56898 105477 78791 55473 106269 TRUE FALSE 113343.5474 72064.39247 83457.66479 83809.27585 72491.29683 59063.29326 91627.7432 89089.25423 60297.94127 102801.4512 1.102548126 0.701005595 0.811833528 0.81525382 0.705158302 0.574537544 0.891307876 0.866614753 0.586547569 1 16.64950111 -4.75460429 24.99266225 0.766296332 1.102548703 0.37643086 0.12722475 245.6565119 898168.6991 0.030519472 0.292854779 1.76E-05 4.75460429 0.336252371 SDS(ph)QASLTVPLSPQVVR ddPTM_A459_MK2206_30min_R1 1 SDSQASLTVPLSPQVVR 17 0 Q8TEV9-2;Q8TEV9 Q8TEV9-2 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein 1 S(0.083)DS(0.911)QAS(0.006)LTVPLSPQVVR 148.85 0.00032609 3316900 459.17 440.56 608.87 418.59 451.86 470.8 475.45 459.96 340.96 517.08 TRUE FALSE 420.1151803 411.8794639 567.5416008 450.8298743 433.8614594 497.4562891 443.733598 455.9386182 376.4040121 581.1397742 0.722915896 0.708744234 0.976600856 0.775768403 0.746569894 0.856001106 0.76355744 0.784559307 0.647699622 1 9.182741388 -11.76638778 2.515996786 1.897117919 0.781148574 0.385163679 0.084730317 7169295.036 1577726.525 37084822.85 0.021222369 1.71E-12 11.76638778 -1.115969345 SDS(ph)QDEVEK ddPTM_A459_MK2206_30min_R2 2 SDSQDEVEK 9 0 H0YBZ4;Q15390-2;Q15390;H7C5V5;H0YF01 H0YBZ4 MTFR1 Mitochondrial fission regulator 1 1 S(0.26)DS(0.74)QDEVEK;S(0.423)DS(0.577)QDEVEK 117.27 0.0075856 7252700 35021 33232 38076 35535 40527 32424 40305 55878 41758 47704 TRUE FALSE 37702.23469 31581.7472 39345.43484 32631.67683 38935.70635 33657.91804 35012.90509 63181.44646 45390.03536 46147.42239 0.816995462 0.684366441 0.852603088 0.707118082 0.843724402 0.729356404 0.758718543 1.369121897 0.983587663 1 15.49396245 -7.736032394 24.98881635 1.132266066 0.76906971 0.671935501 0.111015904 106.8578697 105099.2593 0.047568684 0.027450533 1.84E-08 7.736032394 -0.363196357 SDS(ph)RAQAVSEDAGGNEGR ddPTM_A459_MK2206_30min_R1 2 SDSRAQAVSEDAGGNEGR 18 1 P55884;P55884-2;C9JZG1 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 S(0.037)DS(0.963)RAQAVSEDAGGNEGR;S(0.233)DS(0.767)RAQAVSEDAGGNEGR 198.88 9.59E-10 16267700 2963.8 3191.4 3755 5378.6 5721.6 4589.1 1775.9 4658.3 1066.57 436.53 TRUE FALSE 2711.713246 2983.63928 3500.121062 5792.860704 5493.696556 4848.930876 1657.432951 4617.572974 1177.443768 490.610632 5.527220711 6.081481087 7.134213638 11.8074504 11.19767122 9.88346065 3.378306223 9.411889333 2.39995567 1 8.938434689 -8.357331084 4.469803993 1.124557069 8.089851163 0.509114408 2.503688647 0.196069078 6.297616645 2.585826374 0.681989528 4.39E-09 8.357331084 6.965294094 SDS(ph)VSASER ddPTM_A459_MK2206_30min_R1 1 SDSVSASER 9 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 S(0.133)DS(0.866)VSASER 147.28 0.0016556 3341700 1885 1716.7 2120.6 1522.9 1602 1551.1 1537.8 1723.1 732.09 1639.4 TRUE FALSE 1724.670851 1604.942518 1976.65958 1640.194022 1538.188948 1638.921942 1435.216168 1708.035118 808.1933753 1842.501249 0.936048674 0.871067262 1.072813156 0.89019968 0.834837398 0.88950927 0.778949902 0.927019789 0.438639255 1 10.84744988 -6.855442266 0.953922139 0.768420993 0.947057498 0.171794656 0.147211303 0.936331969 1.814363416 0.087477288 0.072863271 1.39E-07 6.855442266 0.178636505 SDS(ph)YSQSLK ddPTM_A459_MK2206_30min_R2 1 SDSYSQSLK 9 0 Q9H8W4 Q9H8W4 PLEKHF2 Pleckstrin homology domain-containing family F member 2 1 S(0.001)DS(0.998)YS(0.001)QSLK 95.618 0.022215 8016600 14112 24209 21758 20516 20522 29941 49919 39945 36417 44625 TRUE FALSE 15192.42557 23006.81626 22483.40086 18839.77717 19716.20317 31080.42574 43364.57534 45165.94865 39584.48483 43168.8899 0.351929957 0.53294899 0.520824161 0.436420237 0.456722496 0.719972781 1.00453302 1.046261527 0.916967866 1 15.39770437 -7.018730855 2.558851976 0.997617242 0.464557633 0.950388749 0.057218159 0.058863408 0.771735171 0.024320711 0.019177808 9.58E-08 7.018730855 -0.533059609 down SDSDS(ph)STLAK ddPTM_A459_MK2206_30min_R2 1 SDSDSSTLAK 10 0 Q6AWC2-3;Q6AWC2-2;Q6AWC2-4;Q6AWC2;Q6AWC2-6;Q6AWC2-7 Q6AWC2-3 WWC2 Protein WWC2 1 S(0.097)DS(0.143)DS(0.253)S(0.253)T(0.253)LAK 138.99 0.0015763 21949000 73279 77876 92140 81618 79115 67201 83570 64928 63771 86016 TRUE FALSE 78889.29658 74008.79108 95211.90161 74949.54832 76008.54758 69758.38114 72597.15861 73414.31253 69317.68631 83209.30496 0.948082629 0.889429267 1.144245847 0.90073518 0.913462114 0.838348321 0.872464427 0.882284891 0.833052101 1 16.34445725 -5.971927015 24.999894 0.883005849 0.989973659 0.284324107 0.074081354 258.4847037 230187.2229 0.020353812 0.030188974 1.07E-06 5.971927015 0.10696781 SDSDS(ph)STLSK ddPTM_A459_MK2206_30min_R1 1 SDSDSSTLSK 10 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 SDS(0.25)DS(0.566)S(0.146)T(0.038)LSK 148.78 0.00077327 15863000 9273.5 9430.9 7350.8 7346 5885.3 5346.2 8515.5 9116.5 2386.9 5798.6 TRUE FALSE 8484.740128 8816.946696 6851.848177 7911.790193 5650.876039 5648.897224 7947.446532 9036.795402 2635.026797 6516.974345 1.301944688 1.352920271 1.051384863 1.214028132 0.867101164 0.866797524 1.219499435 1.386655052 0.404332848 1 12.6699866 -5.454343316 1.245426424 0.994113645 1.359254564 0.217180133 0.251483698 1.022541857 2.710734083 0.082508771 0.352814078 3.51E-06 5.454343316 0.365140919 SDSDSS(ph)TLSK ddPTM_A459_MK2206_30min_R2 1 SDSDSSTLSK 10 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 S(0.018)DS(0.211)DS(0.144)S(0.314)T(0.314)LSK 103.43 0.014226 27240000 36886 40220 32651 38903 43323 23999 38881 31994 34918 34542 TRUE FALSE 39710.02052 38222.73329 33739.56804 35724.50046 41621.92134 24912.29876 33775.878 36175.72565 37955.10452 33414.89737 1.188392712 1.143883007 1.009716345 1.069118964 1.245609731 0.745544674 1.010802985 1.082622677 1.135873742 1 15.02820382 SDSDSST(ph)LAK ddPTM_A459_MK2206_30min_R2 1 SDSDSSTLAK 10 0 Q6AWC2-3;Q6AWC2-2;Q6AWC2-4;Q6AWC2;Q6AWC2-6;Q6AWC2-7 Q6AWC2-3 WWC2 Protein WWC2 1 S(0.042)DS(0.298)DS(0.179)S(0.052)T(0.429)LAK 125.97 0.0082686 21321000 98418 112310 104110 112430 114250 86999 100450 107410 80093 122630 TRUE FALSE 105952.9578 106732.8487 107580.9754 103244.1094 109763.9709 90309.80791 87260.79434 121448.8558 87059.34437 118628.5931 0.893148565 0.899722789 0.906872218 0.870313865 0.925274152 0.76128196 0.735579779 1.023773886 0.733881622 1 16.85609226 SDSDT(ph)EGLLFSR ddPTM_A459_MK2206_30min_R2 1 SDSDTEGLLFSR 12 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(0.095)DS(0.21)DT(0.685)EGLLFS(0.01)R 99.669 0.028241 0 5015.2 6631.8 4871.6 6861.1 6375.6 5156.8 6892.1 5642 6366.1 5795.6 TRUE FALSE 5399.167568 6302.474456 5034.016713 6300.526182 6125.261909 5353.045638 5987.158991 6379.428772 6919.811871 5606.490047 0.963020985 1.124139061 0.897890957 1.123791558 1.092530595 0.95479446 1.067897908 1.137864996 1.234250273 1 12.45288214 -7.649073829 4.105138167 1.139424937 1.030800694 0.190032072 0.088217047 0.32501811 9.885749382 0.042960017 0.023321908 2.24E-08 7.649073829 -0.108624243 SDSDYDLS(ph)PK ddPTM_A459_MK2206_30min_R2 4 SDSDYDLSPK 10 0 A0A1B0GW84;Q08499-11;Q08499-2;Q08499-10;A0A087WSZ7;Q08499;A0A1W2PQN6;Q08499-6;Q08499-7;Q08499-12;Q08499-9;Q07343-3;Q07343;E9PMG3 A0A1B0GW84;Q08499-6;Q08499-9;Q07343-3 PDE4D;PDE4B "cAMP-specific 3,5-cyclic phosphodiesterase 4D;cAMP-specific 3,5-cyclic phosphodiesterase 4B" 1 SDS(0.002)DYDLS(0.998)PK;SDSDYDLS(1)PK;SDS(0.002)DYDLS(0.998)PK;SDS(0.02)DYDLS(0.98)PK 132.86 0.0023684 152593000 768731 784043 907476 610746 703532 487999 816685 601496 581784 911196 TRUE FALSE 827585.6364 745108.5647 937730.7969 560846.0981 675907.7987 506570.1439 709453.2785 680113.5924 632386.5207 881463.7491 0.938876542 0.845308234 1.063833649 0.636266776 0.766801584 0.574691976 0.804858146 0.771572958 0.717427712 1 19.74954171 -5.765327704 24.99999954 0.738865924 0.93893635 0.366657632 0.116919228 96.57734554 620950.4701 0.03087283 0.04778771 1.72E-06 5.765327704 0.200070425 SDSFENPVLQQHFR ddPTM_A459_MK2206_30min_R1 1 SDSFENPVLQQHFR 14 0 P12956;B1AHC9;P12956-2 P12956 XRCC6 X-ray repair cross-complementing protein 6 0 101.45 0.011633 8032700 4518.2 4117.4 4034.3 3488.3 4795.4 4275.1 4440.7 3969.4 3947.4 3431.5 FALSE TRUE 4133.903364 3849.356512 3760.462956 3756.96947 4604.389064 4517.152468 4144.469006 3934.695954 4357.746356 3856.620127 1.071897991 0.998116585 0.975066984 0.974161143 1.193892298 1.171272337 1.074637602 1.020244625 1.129939225 1 11.91312133 -6.234781216 24.8680633 1.101805657 1.00220797 0.353249535 0.061845347 804.4493276 750430.5139 0.019082917 0.024629735 5.82E-07 6.234781216 -0.099597687 SDSFENPVLQQHFR ddPTM_A459_MK2206_30min_R2 4 SDSFENPVLQQHFR 14 0 P12956;B1AHC9;P12956-2 P12956 XRCC6 X-ray repair cross-complementing protein 6 0 ;;; 99.481 0.013576 23791600 168722 240728 215988 244640 241662 241661 244383 184793 208345 224676 FALSE TRUE 181639.486 228773.7976 223188.9321 224652.1294 232173.1356 250857.5787 212295.2185 208946.0796 226466.4715 217344.8405 0.835720257 1.052584441 1.026888568 1.033620715 1.068224739 1.154191552 0.976766773 0.961357441 1.041968473 1 17.72962632 -4.758649162 24.99969869 1.036495568 0.835719988 0.58086692 0.050787447 59.11343819 529542.4478 0.013493181 0.091060984 1.74E-05 4.758649162 -0.20077558 SDSGGS(ph)SSEPFDR ddPTM_A459_MK2206_30min_R1 1 SDSGGSSSEPFDR 13 0 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 S(0.004)DS(0.013)GGS(0.895)S(0.044)S(0.044)EPFDR 158.86 0.00036447 7066800 756.66 777.83 943.16 821.82 1245.3 747.41 979.64 796.98 801.73 766.52 TRUE FALSE 692.3020936 727.1931256 879.140927 885.1167188 1195.697064 789.7277083 914.2900031 790.0120879 885.0727025 861.4822845 0.80361733 0.844118491 1.020497975 1.027434614 1.387953166 0.916708007 1.06129867 0.917038112 1.027383521 1 9.750677319 -5.255678886 2.805246162 1.052941723 0.806822494 0.341080052 0.123871889 0.316953435 4.898595896 0.034574946 0.107531974 5.55E-06 5.255678886 -0.246119229 SDSKEDENLVINEVINS(ph)PK ddPTM_A459_MK2206_30min_R1 1 SDSKEDENLVINEVINSPK 19 1 Q5FWF5-2;Q5FWF5 Q5FWF5-2 ESCO1 N-acetyltransferase ESCO1 1 SDSKEDENLVINEVINS(1)PK 108.5 0.00040499 3674300 1218.3 2236.8 1706.2 1676.8 977.27 1046.2 967.69 1075.1 1205.4 958.45 TRUE FALSE 1114.677187 2091.183913 1590.387898 1805.947427 938.3432665 1105.43494 903.1371658 1065.700514 1330.705644 1077.190022 1.034800884 1.941332421 1.47642279 1.676535606 0.871102821 1.026220924 0.838419543 0.989333815 1.235349025 1 10.07305706 -6.261644743 24.99999982 0.986762623 1.557502179 0.562341948 0.232422472 12.79658704 1557779.568 0.0670036 0.080854175 5.47E-07 6.261644743 0.570739556 SDSLS(ph)PPR ddPTM_A459_MK2206_30min_R1 1 SDSLSPPR 8 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46;D6RJ93;Q6NVB9;Q9UPQ0-7;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 SDS(0.015)LS(0.984)PPR 86.882 0.035509 0 4036.8 3827.8 3438.7 3073.7 3982.5 3467.5 4095.2 3159 3464 3026.8 TRUE FALSE 3693.448962 3578.609524 3205.290625 3310.436907 3823.868592 3663.826853 3822.01668 3131.381196 3824.095196 3401.782835 1.085739196 1.051980593 0.942238461 0.973147631 1.124077808 1.077031378 1.123533413 0.920511787 1.124144421 1 11.73207533 -4.854315058 4.841132867 1.03593226 1.085196406 0.041565369 0.07233184 0.733940702 26.74975056 0.018290971 0.088736098 1.40E-05 4.854315058 0.049264147 SDSLS(ph)PPR ddPTM_A459_MK2206_30min_R2 1 SDSLSPPR 8 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46;D6RJ93;Q6NVB9;Q9UPQ0-7;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 SDS(0.008)LS(0.992)PPR 104.42 0.013081 0 142840 182370 209560 194180 172270 180420 160830 151570 132810 154550 TRUE FALSE 153775.9402 173313.771 216546.6258 178314.8728 165505.8142 187286.0095 139712.8278 171380.7194 144361.5737 149507.0462 1.02855313 1.159234802 1.448404148 1.192685411 1.107010127 1.252690186 0.934489921 1.1463053 0.965583746 1 17.18985395 -7.253476407 24.67058327 1.023786849 1.203321272 0.386475388 0.114593861 578.25166 1791520.639 0.045825067 0.034824999 5.58E-08 7.253476407 0.179534423 SDSPES(ph)DAER ddPTM_A459_MK2206_30min_R1 1 SDSPESDAER 10 0 O75400-3;O75400;O75400-2 O75400-3;O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 SDSPES(1)DAER 146.16 0.00087336 4313900 1230 1672.2 1755.3 1011.4 1111.1 1233.1 1875.5 1261.5 1757 2345 TRUE FALSE 1125.382041 1563.339476 1636.155127 1089.298203 1066.842534 1302.917056 1750.388817 1250.470838 1939.646437 2635.516304 0.427006291 0.593181485 0.620810095 0.413314917 0.404794511 0.494368809 0.664154046 0.47446902 0.7359645 1 11.3638699 -8.555402796 2.383310772 1.00023993 0.514229524 0.762668504 0.085764153 0.156370433 2.106545518 0.086216349 0.023514379 2.78E-09 8.555402796 -0.486010406 SDSPES(ph)DAEREK ddPTM_A459_MK2206_30min_R2 1 SDSPESDAEREK 12 1 O75400-3;O75400;O75400-2 O75400-3;O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 SDSPES(1)DAEREK 177.38 0.00049202 47769000 50310 65649 59746 53056 54419 47842 62421 46191 51285 67179 TRUE FALSE 54161.77228 62388.96612 61737.90182 48721.15508 52282.23663 49662.66083 54225.04772 52228.3223 55745.6766 64986.95473 0.833425301 0.960022921 0.950004537 0.749706695 0.804503563 0.764194307 0.834398964 0.803673945 0.857797951 1 15.98786252 -5.747561216 24.99746896 0.818733205 0.919038134 0.206398387 0.072640062 293.0213457 527788.0308 0.018617832 0.032035734 1.79E-06 5.747561216 0.100304929 SDSQAS(ph)LTVPLSPQVVR ddPTM_A459_MK2206_30min_R1 1 SDSQASLTVPLSPQVVR 17 0 Q8TEV9-2;Q8TEV9 Q8TEV9-2 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein 1 S(0.003)DS(0.156)QAS(0.838)LT(0.003)VPLSPQVVR 141.22 0.00029133 0 708.83 824.71 733.65 424.42 649.8 481.89 655.81 712.7 576.94 731.36 TRUE FALSE 648.5402863 771.0212291 683.8518821 457.1089019 623.91709 509.1741954 612.0621115 706.468939 636.9149776 821.9663983 0.789010704 0.938020375 0.831970605 0.556116288 0.759054252 0.61945865 0.744631548 0.859486398 0.774867414 1 9.682935608 -8.978390185 0.993782551 0.99928674 0.753126221 0.322435616 0.103975957 2.0936709 3.197470624 0.110083682 0.035015273 1.05E-09 8.978390185 -0.246160519 SDSQASLTVPLS(ph)PQVVR ddPTM_A459_MK2206_30min_R1 4 SDSQASLTVPLSPQVVR 17 0 Q8TEV9-2;Q8TEV9 Q8TEV9-2 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein 1 S(0.001)DS(0.007)QAS(0.003)LT(0.001)VPLS(0.988)PQVVR;SDSQAS(0.004)LT(0.002)VPLS(0.994)PQVVR;SDSQASLT(0.001)VPLS(0.999)PQVVR;SDSQASLTVPLS(1)PQVVR 219.72 6.87E-12 80931600 7990.46 8688.04 7016.23 6749.3 7870 7605.82 7741.63 6852.41 6078.55 6663.84 TRUE FALSE 7310.829417 8122.447017 6539.987856 7269.132255 7556.521235 8036.454956 7225.199988 6792.500102 6710.437025 7489.406809 0.976156003 1.084524746 0.873231756 0.970588518 1.008961247 1.073042921 0.964722597 0.906947676 0.895990456 1 12.87063574 -7.526035 16.46975125 0.928045954 0.997274418 0.180071771 0.060568021 2.302832909 11969.56016 0.028590189 0.016825186 2.98E-08 7.526035 0.069228464 SDSQASLTVPLS(ph)PQVVR ddPTM_A459_MK2206_30min_R2 4 SDSQASLTVPLSPQVVR 17 0 Q8TEV9-2;Q8TEV9 Q8TEV9-2 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein 1 SDSQAS(0.001)LT(0.001)VPLS(0.999)PQVVR;SDSQASLTVPLS(1)PQVVR;SDSQASLT(0.002)VPLS(0.998)PQVVR;SDSQASLTVPLS(1)PQVVR 218.22 8.50E-12 84935000 144461 174803 158811 188141 166743 165612 148306 138916 175930 147807 TRUE FALSE 155521.0452 166122.5372 164105.6795 172769.2785 160195.832 171914.4807 128833.2441 157072.7982 191232.0734 142984.0697 1.087680925 1.161825493 1.147720021 1.208311379 1.120375384 1.202333107 0.901032152 1.098533553 1.337436218 1 17.1254949 SDSS(ph)LETMENTGVMDK ddPTM_A459_MK2206_30min_R1 2 SDSSLETMENTGVMDK 16 0 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 SDS(0.003)S(0.997)LETMENTGVMDK;S(0.003)DS(0.062)S(0.934)LET(0.002)MENTGVMDK 224.67 2.00E-11 4386100 2253.3 1879.23 2325.5 2142.45 2558.2 2099.7 2368.34 2444.95 2313.78 2359.53 TRUE FALSE 2061.645002 1756.891785 2167.651539 2307.46187 2456.301477 2218.583199 2210.35236 2423.57406 2554.305711 2651.84639 0.777437566 0.662516423 0.81741218 0.870134062 0.926260845 0.836618293 0.833514478 0.913919475 0.963217825 1 11.37278149 -2.100395988 0.161329945 1.018891973 1.94E-18 0.687696729 0.051984996 32.3620867 0.397952827 0.169729277 7.571628279 0.007936043 2.100395988 -1.018891973 SDSVLPASHGHLPQAGS(ph)LER ddPTM_A459_MK2206_30min_R1 1 SDSVLPASHGHLPQAGSLER 20 0 Q8N4C8;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8-5 Q8N4C8;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 SDSVLPAS(0.005)HGHLPQAGS(0.995)LER 55.469 0.023194 11813000 3046.8 1900.2 2579.9 1738.4 3686.5 3649.3 3399.9 2801.6 1779.1 1680.2 TRUE FALSE 2787.653661 1776.496635 2404.783576 1872.291869 3539.658899 3855.920212 3173.098874 2777.105907 1964.043812 1888.355861 1.476233224 0.940763694 1.273480082 0.991493133 1.874466022 2.041945744 1.680350055 1.470647543 1.040081402 1 10.88291495 -6.250256674 24.96043025 1.575770788 1.161439584 0.191585722 0.337079908 1067.096624 2381819.569 0.102977858 0.131706684 5.62E-07 6.250256674 -0.414331204 SDSVLPASHGHLPQAGS(ph)LER ddPTM_A459_MK2206_30min_R2 4 SDSVLPASHGHLPQAGSLER 20 0 Q8N4C8;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8-5 Q8N4C8;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 SDSVLPAS(0.007)HGHLPQAGS(0.993)LER;SDSVLPASHGHLPQAGS(1)LER;SDSVLPASHGHLPQAGS(1)LER;SDSVLPAS(0.001)HGHLPQAGS(0.999)LER 113.52 0.00015693 72272000 58500.4 91546 77617 111735 119418 134218 123198 90406 114069 111855 TRUE FALSE 62979.2356 86999.95876 80204.71204 102605.8931 114729.0493 139325.76 107021.9546 102222.3746 123990.5154 108205.1805 0.582035308 0.804027666 0.741228023 0.948253056 1.060291649 1.287607113 0.989064979 0.944708693 1.145883356 1 16.72341005 -5.847969543 1.978683278 1.075409354 0.696746752 0.715465107 0.102446965 0.185129225 1.479212657 0.033137363 0.060419458 1.42E-06 5.847969543 -0.378662603 SDSYS(ph)QSLK ddPTM_A459_MK2206_30min_R1 1 SDSYSQSLK 9 0 Q9H8W4 Q9H8W4 PLEKHF2 Pleckstrin homology domain-containing family F member 2 1 S(0.002)DS(0.225)YS(0.771)QS(0.002)LK 97.452 0.020579 5191900 1273.7 1113.4 1285.9 1126.4 1522 1551.6 1612.9 1929.1 1596.5 1394.4 TRUE FALSE 1165.365127 1040.917458 1198.616691 1213.155523 1461.375517 1639.450251 1505.306384 1912.234082 1762.461888 1567.148799 0.743621236 0.664210991 0.764839109 0.774116359 0.93250591 1.046135665 0.960538262 1.220199437 1.124629575 1 10.61392645 -6.4652845 1.021643295 1.106339891 0.699170676 0.842758341 0.068441715 0.18605751 0.415841028 0.033425059 0.041357441 3.43E-07 6.4652845 -0.407169216 SDT(ph)SSPEVR ddPTM_A459_MK2206_30min_R1 1 SDTSSPEVR 9 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.01)DT(0.33)S(0.33)S(0.33)PEVR 106.2 0.031118 28308000 7146.7 6932.7 6070.5 5457.6 5437 5400.8 7444.5 6499 2498.7 4814.6 TRUE FALSE 6538.835636 6481.37997 5658.451373 5877.945298 5220.432777 5706.588629 6947.890988 6442.179928 2758.448807 5411.068996 1.208418455 1.197800282 1.045717838 1.086281713 0.964769213 1.054613909 1.284014488 1.190555865 0.509778901 1 12.40169792 -8.242959837 24.83846811 0.754889408 1.124323771 0.527487592 0.141583957 497.1301325 668198.3018 0.094426854 0.035544965 5.72E-09 8.242959837 0.369434363 SDTDTGVCS(ph)GTDEDPDDKNAPFR ddPTM_A459_MK2206_30min_R2 1 SDTDTGVCSGTDEDPDDKNAPFR 23 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83;Q5JSH3-3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 S(0.004)DT(0.019)DT(0.027)GVCS(0.859)GT(0.091)DEDPDDKNAPFR 68.771 0.040703 0 16107 15296 16798 15701 15283 9608.4 12829 12507 13041 16721 TRUE FALSE 17340.1643 14536.42288 17358.03694 14418.17807 14682.91263 9974.054395 11144.53689 14141.70784 14175.28261 16175.39514 1.072008699 0.898674979 1.073113626 0.891364814 0.907731311 0.616618902 0.688980813 0.87427279 0.876348459 1 13.98151333 -6.20141412 2.237469446 0.797965141 0.99908481 0.334769057 0.113815491 0.341621061 3.35673699 0.038200519 0.05115449 6.29E-07 6.20141412 0.201119669 SDTPEVHPPLPIS(ph)QSPENESNDRR ddPTM_A459_MK2206_30min_R1 1 SDTPEVHPPLPISQSPENESNDRR 24 1 Q03164-2;Q03164;Q03164-3;A0A3B3ITZ1;E9PR05 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 SDTPEVHPPLPIS(0.8)QS(0.196)PENES(0.004)NDRR 55.662 0.0076537 5358500 719.34 577.42 547.83 515.17 680.7 598.53 598.96 711.02 646.4 772.89 TRUE FALSE 658.1563556 539.829853 510.6448259 554.8484827 653.5862776 632.4182514 559.0044713 704.8036271 713.5955932 868.6414482 0.757684724 0.621464534 0.58786606 0.638754326 0.752423545 0.728054426 0.643538795 0.811386135 0.821507648 1 9.762616984 -8.521049874 0.600371766 1.006015537 0.656070388 0.757495803 0.057547003 0.438512544 0.371269712 0.062970208 0.027255146 3.01E-09 8.521049874 -0.349945149 SDTS(ph)SPEVR ddPTM_A459_MK2206_30min_R1 1 SDTSSPEVR 9 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.018)DT(0.07)S(0.456)S(0.456)PEVR 106.18 0.013318 32929000 12314 11880 10575 9491.5 10484 8875.8 10996 11006 4620.4 8799.2 TRUE FALSE 11266.62964 11106.60984 9857.198464 10222.53697 10066.40008 9378.340126 10262.4769 10909.7757 5100.707114 9889.311327 1.13927343 1.123092344 0.996752771 1.033695536 1.017907086 0.948330962 1.037734233 1.103188619 0.51577981 1 13.27165434 -8.235033457 24.9894554 0.757889768 1.045247944 0.479205873 0.121726921 511.5108386 484073.8871 0.076641091 0.028949603 5.82E-09 8.235033457 0.287358175 SDTS(ph)SPEVR ddPTM_A459_MK2206_30min_R2 1 SDTSSPEVR 9 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.001)DT(0.068)S(0.465)S(0.465)PEVR 89.08 0.030344 83692000 83838 103110 87549 105300 100110 105650 110520 93226 83570 112840 TRUE FALSE 90256.70174 97989.70734 90467.83996 96696.65316 96179.17839 109670.5848 96008.59124 105410.9583 90838.76754 109158.04 0.826844287 0.897686577 0.82877853 0.88584087 0.881100268 1.004695437 0.879537515 0.965672874 0.832176608 1 16.73605887 -6.54110633 24.90275817 0.932069648 0.863178549 0.322560528 0.052881362 290.1282705 396374.0356 0.016315392 0.01631807 2.88E-07 6.54110633 -0.068891099 SDTSGHFER ddPTM_A459_MK2206_30min_R1 5 SDTSGHFER 9 0 P20073-2;P20073 P20073-2 ANXA7 Annexin A7 0 ;;;; 144.65 0.0027091 10117000 13486.9 7729.2 9032.7 7247.1 12346.7 10887.6 16567.2 14182.5 1380.76 6748.7 FALSE TRUE 12339.76833 7226.027675 8419.585491 7805.272898 11854.90479 11504.0465 15462.03232 14058.5039 1524.294943 7584.779906 1.626911853 0.952701036 1.110063258 1.029070454 1.562985998 1.516727795 2.038560447 1.853515075 0.200967591 1 12.8888916 -6.26299029 24.90421193 1.446353701 1.158500296 0.013653224 0.506569246 411.4149642 6606412.413 0.154909178 0.18527547 5.46E-07 6.26299029 -0.287853406 SDTSGHFER ddPTM_A459_MK2206_30min_R2 3 SDTSGHFER 9 0 P20073-2;P20073 P20073-2 ANXA7 Annexin A7 0 ;; 147.75 0.0022554 10115100 32280.8 65484.1 49581.7 81033 75853 88295 79288 55447.1 62703 55762.9 FALSE TRUE 34752.24287 62232.25482 51234.72913 74412.34469 72874.63009 91655.1281 68877.39036 62694.22635 68156.7936 53943.36114 0.644235771 1.153659199 0.949787482 1.379453247 1.350947152 1.699099318 1.276846472 1.16222321 1.263488076 1 15.7191578 -4.472034848 0.945629591 1.317121336 8.93E-13 0.478594029 0.194779957 2.983285098 1.42783526 0.066989054 4.625400506 3.37E-05 4.472034848 -1.317121336 SDTSGHFQR ddPTM_A459_MK2206_30min_R1 1 SDTSGHFQR 9 0 P50995-2;P50995 P50995-2 ANXA11 Annexin A11 0 172.23 3.04E-09 0 3581.2 2160.1 2442.3 1957.9 2950 2945.6 4243 3924.6 277.98 1923.2 FALSE TRUE 3276.600134 2019.477097 2276.523481 2108.697797 2832.495253 3112.377326 3959.957212 3890.287636 306.8770158 2161.460535 1.515919482 0.934311344 1.053233887 0.975589312 1.3104543 1.439941778 1.832074723 1.799842085 0.141976692 1 11.07779078 -6.366725885 7.086607169 1.334047915 1.102325546 0.001803348 0.471888387 0.936331594 55.20995931 0.147587067 0.16738127 4.30E-07 6.366725885 -0.23172237 SDTSGHFQR ddPTM_A459_MK2206_30min_R2 2 SDTSGHFQR 9 0 P50995-2;P50995 P50995-2 ANXA11 Annexin A11 0 ; 156.35 0.0011788 6735300 16414 37677 29754 48610 45504 51108 41181 30882 45055 32832 FALSE TRUE 17670.66846 35806.01497 30745.98351 44638.4075 43717.28432 53052.95075 35773.88523 34918.38343 48973.80246 31760.69453 0.556369082 1.127368765 0.968051359 1.405460685 1.376458701 1.67039643 1.126357146 1.09942128 1.541962579 1 14.95495484 -4.576552609 1.066288092 1.31861335 6.94E-15 0.505814577 0.215392525 2.142666482 1.50084385 0.068357213 3.553350457 2.65E-05 4.576552609 -1.31861335 SDVLELTDDNFESR ddPTM_A459_MK2206_30min_R1 4 SDVLELTDDNFESR 14 0 H7BZJ3 H7BZJ3 PDIA3 0 ;;; 249.98 2.59E-26 31599800 9408.38 9065.7 9523.6 8803.31 10866.8 8826.05 8767.24 8844.38 7773.4 8057.1 FALSE TRUE 8608.147876 8475.521282 8877.164566 9481.342462 10433.95235 9325.773324 8182.393416 8767.054518 8581.472747 9055.274376 0.950622534 0.935976198 0.980330821 1.047051924 1.152251374 1.029871977 0.903605244 0.968171052 0.947676723 1 13.14454264 -10.44378441 11.93137077 0.999999787 0.993056631 0.000564004 0.067464643 0 0 0.073580499 0.017845892 3.60E-11 10.44378441 -0.006943156 SDVLELTDDNFESR ddPTM_A459_MK2206_30min_R2 1 SDVLELTDDNFESR 14 0 H7BZJ3 H7BZJ3 PDIA3 0 232.5 2.24E-12 14802000 40728 41226 46332 44683 42215 51125 55408 40015 44171 40693 FALSE TRUE 43846.16699 39178.77679 47876.68576 41032.25597 40557.42699 53070.5977 48132.86304 45245.09789 48012.91374 39365.19074 1.113830929 0.995264498 1.216218818 1.042348714 1.030286561 1.348160563 1.222726529 1.149368186 1.219679438 1 15.26463285 -6.72045215 24.99999058 1.19949442 1.080426681 0.229965701 0.098046673 204.5397575 124757.5822 0.031277579 0.031277269 1.90E-07 6.72045215 -0.119067739 SDVYYFS(ph)PSGK ddPTM_A459_MK2206_30min_R1 2 SDVYYFSPSGK 11 0 X6RBL6;Q9UBB5-3;Q9UBB5 X6RBL6 MBD2 Methyl-CpG-binding domain protein 2 1 SDVYYFS(0.998)PS(0.002)GK;S(0.003)DVYYFS(0.995)PS(0.003)GK 115.34 0.0062052 12888700 7288.7 5470.4 5793.4 4715.5 4977.5 4651.8 5375.9 4715.7 4909.7 5596.6 TRUE FALSE 6668.757791 5114.275966 5400.160149 5078.688627 4779.235635 4915.180896 5017.28352 4674.471132 5420.080885 6289.94906 1.060224451 0.813087025 0.858537978 0.807429214 0.75982104 0.781434134 0.797666797 0.743165181 0.861705052 1 12.61883262 -4.761437213 14.55047505 0.813013383 1.060307134 0.501429119 0.06955538 0.037003765 1404.381274 0.016100523 0.089767018 1.73E-05 4.761437213 0.247293751 SDVYYFS(ph)PSGK ddPTM_A459_MK2206_30min_R2 1 SDVYYFSPSGK 11 0 X6RBL6;Q9UBB5-3;Q9UBB5 X6RBL6 MBD2 Methyl-CpG-binding domain protein 2 1 SDVYYFS(0.677)PS(0.323)GK 104.94 0.011007 0 30923 31048 21928 34205 34879 38463 31833 22532 27265 29144 TRUE FALSE 33290.48866 29506.20147 22659.06858 31410.34208 33509.47521 39926.73642 27653.28886 25477.00976 29636.46042 28193.03367 1.18080548 1.04657774 0.803711613 1.114117142 1.188572879 1.416191563 0.980855384 0.903663297 1.051197993 1 14.7830511 -7.468576118 24.99992073 0.97490778 1.116664801 0.180668873 0.146077054 604.745903 278414.0781 0.067446183 0.045471916 3.40E-08 7.468576118 0.141757021 SDVYYFSPS(ph)GK ddPTM_A459_MK2206_30min_R2 1 SDVYYFSPSGK 11 0 X6RBL6;Q9UBB5-3;Q9UBB5 X6RBL6 MBD2 Methyl-CpG-binding domain protein 2 1 SDVYYFS(0.323)PS(0.677)GK 117.2 0.0056675 3042300 36117 30709 32811 34441 32612 27538 38023 28566 23519 38463 TRUE FALSE 38882.14529 29184.03572 33904.90236 31627.06013 31331.48902 28585.97789 33030.53443 32299.67428 25564.64011 37207.95546 1.04499548 0.784349351 0.911227235 0.850008009 0.842064248 0.768275965 0.887727746 0.868085168 0.687074573 1 15.1833235 -4.751391724 24.87162886 0.84136954 1.044995924 0.356159709 0.080859482 413.5268773 1023555.838 0.018756473 0.248367232 1.77E-05 4.751391724 0.203626384 SDYDMVDYLNELR ddPTM_A459_MK2206_30min_R1 1 SDYDMVDYLNELR 13 0 Q14974;Q14974-2;J3KTM9 Q14974 KPNB1 Importin subunit beta-1 0 173.72 8.49E-09 0 849.67 709.49 668.74 540.25 640.19 684.91 838.81 558.63 667.35 794.8 FALSE TRUE 777.4011047 663.302072 623.347792 581.8601486 614.6898767 723.6890123 782.8545154 553.7459568 736.7234206 893.2658244 0.870290885 0.742558434 0.697830114 0.651385212 0.688137685 0.810160864 0.87639591 0.619911724 0.824752723 1 9.802945757 -6.776071944 24.69803194 0.805623233 0.72457671 0.163646773 0.10325819 458.1432113 773285.928 0.036412044 0.032252607 1.67E-07 6.776071944 -0.081046523 SDYDMVDYLNELR ddPTM_A459_MK2206_30min_R2 2 SDYDMVDYLNELR 13 0 Q14974;Q14974-2;J3KTM9 Q14974 KPNB1 Importin subunit beta-1 0 ; 145.09 0.0088189 5406000 23271.5 21110.5 19975.1 29583 23485.4 27652 24584.5 20413.7 22701 22866.4 FALSE TRUE 25053.18393 20062.18327 20641.05986 27165.97427 22563.24519 28704.31624 21356.52562 23081.84068 24675.49195 22120.27124 1.132589364 0.906959189 0.933128696 1.228103126 1.020025702 1.297647571 0.965473044 1.043470056 1.11551489 1 14.43308146 -4.456398252 22.41442478 1.060540098 3.359910909 0.034397039 0.119069711 1946.214912 649578.2277 0.028802309 2252.086176 3.50E-05 4.456398252 2.299370811 SEAAEPPKT(ph)PPSSCDSTNAAIAK ddPTM_A459_MK2206_30min_R2 1 SEAAEPPKTPPSSCDSTNAAIAK 23 1 C9JKQ0;A0A0C4DFR3;Q9NQR1-2;Q9NQR1 C9JKQ0 SETD8 N-lysine methyltransferase SETD8 1 SEAAEPPKT(0.968)PPS(0.007)S(0.011)CDS(0.007)T(0.007)NAAIAK 89.831 0.012256 0 15001 13408 13846 13206 14528 9178.7 17636 13391 9712.5 14151 TRUE FALSE 16149.48809 12742.17822 14307.61873 12127.02756 13957.55772 9528.00186 15320.37202 15141.24968 10557.27569 13689.25403 1.179720097 0.930816112 1.045171541 0.885879357 1.019599585 0.696020531 1.119153168 1.106068281 0.771208984 1 13.74075621 -4.757458582 24.72281099 0.956051402 1.179720473 0.213688448 0.130523263 163.7398062 1016745.736 0.031494404 0.232715373 1.75E-05 4.757458582 0.223669071 SEAAGSPDQGSTYS(ph)PAR ddPTM_A459_MK2206_30min_R2 1 SEAAGSPDQGSTYSPAR 17 0 Q96S66-4;Q96S66-3;Q96S66-2;Q96S66 Q96S66-4 CLCC1 Chloride channel CLIC-like protein 1 1 SEAAGSPDQGST(0.001)YS(0.999)PAR 224.99 3.07E-51 0 17461 9380.5 7438.8 12421 9017.6 14168 17003 8749.5 11948 7564.4 TRUE FALSE 18797.82759 8914.678011 7686.805879 11406.16457 8663.523714 14707.17317 14770.48568 9893.089692 12987.21544 7317.574247 2.56886052 1.218255901 1.050458201 1.558735748 1.183933831 2.009842698 2.018494815 1.351963008 1.774797905 1 12.83714976 -6.754340107 24.98375827 1.67723457 1.476010234 0.006108306 0.483224542 674.739348 2374539.481 0.159741181 0.156483164 1.76E-07 6.754340107 -0.201224336 SEAAPASLEGGSLKS(ph)PPPFFYR ddPTM_A459_MK2206_30min_R1 1 SEAAPASLEGGSLKSPPPFFYR 22 1 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 SEAAPASLEGGS(0.007)LKS(0.991)PPPFFY(0.001)R 60.51 0.0082207 17921000 2333.1 2501.7 2006.8 1728.8 1780.1 1882.6 1990.6 2057.1 2236.1 2007.2 TRUE FALSE 2134.657593 2338.838875 1870.584007 1861.952476 1709.194848 1989.191185 1857.810706 2039.114992 2468.550597 2255.86709 0.946269221 1.036780441 0.82920843 0.825382171 0.757666467 0.881785631 0.823546172 0.903916282 1.094280159 1 11.13946635 -8.148633407 5.03424222 1.044996904 0.870220986 0.455860893 0.075460655 0.212774491 7.770836435 0.059360956 0.021259854 7.10E-09 8.148633407 -0.174775918 SEAEDLAEPLSSTEGVAPLSQAPS(ph)PLAIPAIK ddPTM_A459_MK2206_30min_R2 1 SEAEDLAEPLSSTEGVAPLSQAPSPLAIPAIK 32 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 SEAEDLAEPLS(0.003)S(0.002)T(0.002)EGVAPLS(0.048)QAPS(0.945)PLAIPAIK 53.499 0.0019837 17644000 15094 19458 12774 21391 14822 15720 17151 10475 14020 22847 TRUE FALSE 16249.60825 18491.74401 13199.87878 19643.28687 14240.01381 16318.23562 14899.0531 11844.11847 15239.43426 22101.50426 0.735226347 0.836673549 0.597238931 0.888776015 0.644300661 0.738331447 0.674119414 0.535896486 0.689520228 1 14.43185694 -10.48095533 4.752840487 1.000002599 0.703987816 0.444550309 0.099106772 31389608.11 34610155.16 861.0293196 0.023982614 3.30E-11 10.48095533 -0.296014783 SEAEEGEVRT(ph)PTK ddPTM_A459_MK2206_30min_R1 3 SEAEEGEVRTPTK 13 1 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(0.001)EAEEGEVRT(0.999)PTK;SEAEEGEVRT(1)PTK;SEAEEGEVRT(0.992)PT(0.008)K 146.77 0.0061279 225436200 7216.67 7937.47 7266.38 6551.49 7160.62 5891.06 7085.75 6505.31 6257.18 6026.91 TRUE FALSE 6602.85432 7420.73926 6773.158371 7056.086895 6875.397343 6224.606726 6613.072546 6448.434761 6907.636253 6773.569112 0.974796922 1.095543448 0.999939361 1.041708851 1.015033172 0.918955225 0.976305466 0.951999552 1.019792688 1 12.7257005 -6.541492244 24.81751166 0.970191769 1.030511916 0.316255483 0.038386993 232.8476899 310455.2497 0.011934695 0.011936414 2.87E-07 6.541492244 0.060320147 SEAGHASS(ph)PDSEVTSLCQK ddPTM_A459_MK2206_30min_R2 1 SEAGHASSPDSEVTSLCQK 19 0 Q6NZY4;Q6NZY4-2 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 S(0.019)EAGHAS(0.101)S(0.877)PDS(0.004)EVTSLCQK 65.287 0.016028 5731500 9701.9 20830 16372 31072 26982 43993 25031 20233 24715 22453 TRUE FALSE 10444.68492 19795.61249 16917.83431 28533.31821 25922.55111 45667.18444 21744.39963 22877.52257 26864.66603 21720.36045 0.4808707 0.911385082 0.778892889 1.313666883 1.193467814 2.102505829 1.001106758 1.053275457 1.236842551 1 14.40676042 -5.738990518 5.529299237 1.295125379 0.734842744 0.386504632 0.315409984 0.187839186 16.49897884 0.090020387 0.151641192 1.82E-06 5.738990518 -0.560282635 SEAHLTELLEEICDR ddPTM_A459_MK2206_30min_R1 4 SEAHLTELLEEICDR 15 0 F8W031;F8VXJ7;F8W1K5;Q9Y2B0 F8W031;Q9Y2B0 CNPY2 Protein canopy homolog 2 0 ;;; 187.63 3.37E-05 6986300 4558.19 2484.25 3246.34 2705.83 6104.4 5226.07 5472.67 4075.88 2415.24 2509.35 FALSE TRUE 4170.492004 2322.524873 3025.987486 2914.233495 5861.248822 5521.965567 5107.59817 4040.245011 2666.312841 2820.227223 1.478778721 0.823524025 1.072958754 1.033332872 2.07828957 1.957986053 1.811059098 1.432595565 0.945424829 1 11.46159569 -6.217530678 24.97514691 1.593885504 1.08016163 0.231527494 0.379552369 611.6672951 347914.383 0.116280016 0.150116066 6.06E-07 6.217530678 -0.513723874 SEANDAVNS(ph)STK ddPTM_A459_MK2206_30min_R1 1 SEANDAVNSSTK 12 0 O15234;J3KSY7;K7EQ38 O15234 CASC3 Protein CASC3 1 SEANDAVNS(0.333)S(0.333)T(0.333)K 171.11 0.00027924 15257000 6404.4 6767.2 6038.6 4796.3 4974.3 4261.7 5368.6 4526.9 6406.4 8002.5 TRUE FALSE 5859.672149 6326.65405 5628.716657 5165.711857 4776.163098 4502.993771 5010.47049 4487.321791 7072.368206 8993.910116 0.651515534 0.703437545 0.625836436 0.574356625 0.531044122 0.500671422 0.557095904 0.498928912 0.786350777 1 13.13473275 -8.523056717 3.82889294 0.999196503 0.581721889 0.820814262 0.062450896 0.084400871 3.531051854 0.069088239 0.018147613 3.00E-09 8.523056717 -0.417474614 SEANDAVNSS(ph)TK ddPTM_A459_MK2206_30min_R1 2 SEANDAVNSSTK 12 0 O15234;J3KSY7;K7EQ38 O15234 CASC3 Protein CASC3 1 SEANDAVNS(0.473)S(0.498)T(0.029)K;SEANDAVNS(0.011)S(0.519)T(0.469)K 261.17 3.37E-25 29950000 11353.2 11115.3 9453.9 7647.2 7285.1 7410.7 9538 7575.2 9752.1 13744.2 TRUE FALSE 10387.55072 10391.69195 8812.195608 8236.188669 6994.919041 7830.28743 8901.737423 7508.970825 10765.86569 15446.93526 0.672466774 0.672734868 0.570481811 0.533192412 0.452835396 0.506915275 0.576278548 0.486113957 0.696958038 1 13.91503301 -8.60652018 3.982492049 0.999883408 0.55832519 0.7947364 0.068156668 0.186815669 7.323145331 0.073309366 0.019206693 2.47E-09 8.60652018 -0.441558218 SEANDAVNSS(ph)TK ddPTM_A459_MK2206_30min_R2 1 SEANDAVNSSTK 12 0 O15234;J3KSY7;K7EQ38 O15234 CASC3 Protein CASC3 1 SEANDAVNS(0.059)S(0.929)T(0.012)K 128.85 0.0023933 28291000 128890 81073 86961 67718 64049 55223 91444 70339 46755 86424 TRUE FALSE 138757.9175 77047.03271 89860.23634 62185.22278 61534.11444 57324.54996 79437.29296 79532.54881 50821.66539 83603.99196 1.65970445 0.921571218 1.074831886 0.74380686 0.736018855 0.685667617 0.950161483 0.951300852 0.607885631 1 16.35128421 -2.409741018 1.124911551 0.819233747 200 0.744022058 0.142648268 182.021807 1.289105932 0.042590044 92336.64299 0.003892772 2.409741018 199.1807663 SEANDAVNSST(ph)KEEK ddPTM_A459_MK2206_30min_R2 1 SEANDAVNSSTKEEK 15 1 O15234;J3KSY7;K7EQ38 O15234 CASC3 Protein CASC3 1 SEANDAVNS(0.16)S(0.033)T(0.807)KEEK 83.792 0.03158 22645000 84238 70686 86320 58084 70871 35310 70523 59993 40005 92882 TRUE FALSE 90687.32605 67175.83603 89197.86572 53338.3514 68088.24844 36653.74679 61263.24539 67834.29109 43484.56259 89851.26795 1.009304912 0.747633701 0.992727958 0.593629368 0.757788399 0.407938003 0.681829503 0.754961979 0.483961591 1 16.45525124 -5.76636509 24.99980537 0.651785169 0.899663353 0.311731333 0.166985642 135.934916 689924.4573 0.043905527 0.067504089 1.71E-06 5.76636509 0.247878185 SEAPAEVTHFS(ph)PK ddPTM_A459_MK2206_30min_R1 4 SEAPAEVTHFSPK 13 0 Q6PID6 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 1 SEAPAEVT(0.001)HFS(0.999)PK;SEAPAEVT(0.001)HFS(0.999)PK;SEAPAEVTHFS(1)PK;SEAPAEVT(0.001)HFS(0.999)PK 137.61 0.00068243 138530000 24447.3 26216.5 27438.7 23272.4 19914 17384.6 21279.8 22950.7 23176.3 20886.7 TRUE FALSE 22367.92876 24509.80108 25576.23749 25064.84428 19120.78321 18368.90103 19860.26337 22750.04445 25585.55932 23474.30208 0.952868745 1.044112025 1.089541977 1.067756741 0.814541073 0.782511061 0.846042762 0.969146787 1.089939085 1 14.51879465 -6.243294813 24.84183067 0.905212143 1.042606615 0.289323946 0.092122121 983.8592243 1347006.787 0.029766144 0.038345878 5.71E-07 6.243294813 0.137394472 SEAPAEVTHFS(ph)PK ddPTM_A459_MK2206_30min_R2 4 SEAPAEVTHFSPK 13 0 Q6PID6 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 1 SEAPAEVTHFS(1)PK;SEAPAEVT(0.02)HFS(0.98)PK;SEAPAEVT(0.075)HFS(0.925)PK;SEAPAEVTHFS(1)PK 140.68 0.00057485 158064700 907210 1024780 909930 859850 923090 623538 1005210 780495 754753 964260 TRUE FALSE 976666.6951 973890.9154 940266.612 789597.5045 886844.8484 647267.1755 873224.7195 882508.3763 820400.0517 932796.2752 1.047031084 1.044055322 1.008008541 0.84648441 0.950737982 0.693899829 0.936136585 0.946089087 0.87950614 1 19.8312025 -5.645540912 4.940908431 0.887167144 1.040946453 0.400610504 0.078730991 0.199328088 7.727490564 0.021501737 0.038026721 2.26E-06 5.645540912 0.153779309 SECDS(ph)SPEPK ddPTM_A459_MK2206_30min_R1 3 SECDSSPEPK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SECDS(0.5)S(0.5)PEPK;SECDS(0.667)S(0.333)PEPK;SECDS(0.5)S(0.5)PEPK 208.84 0.00015105 73776000 38436.3 42105 40591.7 36629.5 25446.1 22182.5 31768.8 33263.5 13071.7 31734.5 TRUE FALSE 35167.09085 39363.95685 37836.4485 39450.71044 24432.52795 23438.45398 29649.56132 32972.68073 14430.54999 35666.00944 0.98601137 1.103682679 1.060854553 1.106115067 0.685036771 0.657165025 0.83131143 0.924484719 0.404602315 1 15.12226219 -6.25909058 24.98794955 0.746038093 1.066752029 0.494562019 0.155330789 172.8256904 1838622.492 0.044996066 0.055324283 5.51E-07 6.25909058 0.320713936 SECDS(ph)SPEPK ddPTM_A459_MK2206_30min_R2 3 SECDSSPEPK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SECDS(0.5)S(0.5)PEPK;SECDS(0.5)S(0.5)PEPK;SECDS(0.5)S(0.5)PEPK 166.69 0.00031852 119309000 482740 431603 494936 430285 441075 335273 533450 379744 338299 504258 TRUE FALSE 519698.9456 410170.2226 511436.9192 395129.3391 423756.1793 348032.049 463407.3742 429377.8447 367723.6355 487804.1028 1.065384532 0.840850293 1.048447351 0.810016433 0.868701548 0.713466834 0.949986627 0.880225981 0.753834651 1 18.89594237 -5.773330271 24.94708676 0.847544877 0.970489693 0.269865875 0.09762596 280.7093685 588928.1016 0.026087787 0.039040229 1.69E-06 5.773330271 0.122944816 SECDSS(ph)PEPK ddPTM_A459_MK2206_30min_R1 1 SECDSSPEPK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SECDS(0.124)S(0.876)PEPK 194.48 0.00017045 39551000 14673 16426 16648 14498 10661 8602.1 12760 13697 5172 13727 TRUE FALSE 13424.9843 15356.66441 15517.98014 15614.63847 10236.34979 9089.143468 11908.80368 13577.24857 5709.647908 15427.60439 0.870192413 0.99540175 1.005858055 1.012123339 0.663508704 0.589148077 0.771915288 0.880062013 0.370092969 1 13.91322644 -6.261084602 24.99100348 0.703265321 0.975141899 0.377512297 0.162285084 32.3724656 2280355.323 0.047107252 0.057097567 5.48E-07 6.261084602 0.271876578 SECQDMSLSS(ph)PTSVLGGSR ddPTM_A459_MK2206_30min_R2 2 SECQDMSLSSPTSVLGGSR 19 0 O95613-2;O95613 O95613-2 PCNT Pericentrin 1 SECQDMS(0.001)LS(0.048)S(0.949)PT(0.001)SVLGGSR;SECQDMS(0.188)LS(0.307)S(0.503)PT(0.001)SVLGGSR 114.21 0.00049866 12819600 44345 59544 47096 55959 61364 60353 54954 41497 48179 53241 TRUE FALSE 47740.0873 56587.13155 48666.15713 51386.9707 58954.54103 62649.77571 47738.47379 46920.80038 52369.52233 51503.75053 0.926924482 1.09869924 0.944905111 0.997732596 1.144665008 1.216411913 0.926893154 0.911017157 1.016809879 1 15.65238987 SEDDESGAGELTR ddPTM_A459_MK2206_30min_R2 2 SEDDESGAGELTR 13 0 P33993;P33993-2;P33993-3 P33993 MCM7 DNA replication licensing factor MCM7 0 ; 147.28 0.0079997 10107000 21293 27235 22485.4 26283 24512 25245 23227.1 24313 24155.5 22942.8 FALSE TRUE 22923.20845 25882.5495 23235.05201 24135.59482 23549.53572 26205.71617 20177.35387 27490.79258 26256.50173 22194.17831 1.032847809 1.166186427 1.046898501 1.087474133 1.06106815 1.180747302 0.909128222 1.238648811 1.18303554 1 14.43789368 SEDDSAKFDS(ph)NEEDSASVFSPSFGLK ddPTM_A459_MK2206_30min_R1 4 SEDDSAKFDSNEEDSASVFSPSFGLK 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 SEDDS(0.002)AKFDS(0.916)NEEDS(0.06)AS(0.021)VFSPSFGLK;SEDDS(0.001)AKFDS(0.861)NEEDS(0.124)AS(0.014)VFSPSFGLK;S(0.004)EDDS(0.034)AKFDS(0.899)NEEDS(0.053)AS(0.009)VFS(0.001)PSFGLK;S(0.001)EDDS(0.013)AKFDS(0.398)NEEDS(0.398)AS(0.171)VFS(0.016)PS(0.003)FGLK 98.067 1.63E-06 164896000 14528.2 15829.2 16217.9 15480.3 11787.7 10437.3 11130.9 11710.4 13426.1 10957 TRUE FALSE 13292.5003 14798.7162 15117.07413 16672.59539 11318.17095 11028.25091 10388.37797 11608.01721 14821.79114 12314.43588 1.079424216 1.201737241 1.227589658 1.353906549 0.919097802 0.895554698 0.843593492 0.942634914 1.203611053 1 13.58806292 -6.275938268 24.94749629 0.954762937 1.215521423 0.551992864 0.109207916 591.5649249 1017873.182 0.035337485 0.040243661 5.30E-07 6.275938268 0.260758486 SEDDSAKFDS(ph)NEEDSASVFSPSFGLK ddPTM_A459_MK2206_30min_R2 4 SEDDSAKFDSNEEDSASVFSPSFGLK 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 SEDDS(0.006)AKFDS(0.931)NEEDS(0.057)AS(0.006)VFS(0.001)PSFGLK;SEDDSAKFDS(1)NEEDSASVFSPSFGLK;SEDDS(0.011)AKFDS(0.942)NEEDS(0.043)AS(0.003)VFSPSFGLK;SEDDS(0.017)AKFDS(0.982)NEEDS(0.001)ASVFSPSFGLK 128.09 3.68E-09 131874900 261634 331418 295191 291917 255844 192829.4 350123 275926 211020.5 288839 TRUE FALSE 281664.9002 314960.264 305032.5206 268066.4473 245798.279 200167.6579 304151.4295 311990.4756 229374.6817 279414.2071 1.008055042 1.127216355 1.091685794 0.95938732 0.879691414 0.716383251 1.088532443 1.116587731 0.820912738 1 18.09204585 -5.809710671 5.309132041 0.938139846 1.081127535 0.226083028 0.11505621 0.297635348 18.50865615 0.034646552 0.053518659 1.55E-06 5.809710671 0.142987689 SEDES(ph)ET(ph)EDEEEKSQEDQEQK ddPTM_A459_MK2206_30min_R2 1 SEDESETEDEEEKSQEDQEQK 21 1 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 S(0.006)EDES(0.993)ET(0.994)EDEEEKS(0.007)QEDQEQK 66.52 0.031108 9571800 56836 46777 51129 33429 42653 23189 55490 45977 20916 50658 TRUE FALSE 61187.40786 44454.1222 52833.61534 30697.74377 40978.22891 24071.47364 48204.09634 51986.35176 22735.23587 49005.03361 1.248594345 0.907133797 1.078126295 0.626420217 0.836204485 0.491204104 0.983656021 1.060836978 0.463936747 1 15.58064232 -4.444939288 0.970181619 0.792068579 1.737420207 0.287464817 0.210710353 4.58640198 2.221053408 0.068265462 5.300995865 3.59E-05 4.444939288 0.945351628 SEDES(ph)ETEDEEEK ddPTM_A459_MK2206_30min_R2 2 SEDESETEDEEEK 13 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 SEDES(0.923)ET(0.077)EDEEEK;SEDES(0.999)ET(0.001)EDEEEK 234.85 9.64E-14 8614300 55025 33966 45287 34974 27905 22484.3 43364 33978 27534.3 52494 TRUE FALSE 59237.75631 32279.29783 46796.84598 32116.51232 26809.30949 23339.95579 37670.25471 38419.04126 29929.18364 50781.12508 1.166530994 0.635655429 0.921540157 0.632449798 0.52793847 0.459618722 0.741816071 0.756561443 0.589376143 1 15.63200474 -3.288427775 10.33284099 0.721390045 0.88695051 0 0.213570712 0 0 0.048148451 0 0.000514721 3.288427775 0.165560465 SEDES(ph)ETEDEEEKSQEDQEQK ddPTM_A459_MK2206_30min_R2 2 SEDESETEDEEEKSQEDQEQK 21 1 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 SEDES(0.967)ET(0.033)EDEEEKSQEDQEQK;S(0.001)EDES(0.964)ET(0.035)EDEEEKSQEDQEQK 125.31 3.81E-05 128645000 123353 93762 109545 87032 82085 45460 118714 93015 62167 117711 TRUE FALSE 132797.0005 89105.91542 113197.1756 79921.2072 78861.93046 47190.01216 103126.7092 105172.3799 67574.17329 113870.0997 1.166214844 0.782522503 0.994090423 0.701862977 0.692560476 0.414419696 0.905652225 0.923617176 0.593432108 1 16.79702944 -1.542160461 0.905172819 0.748410708 199.7840667 0.296343209 0.177551377 1132.588744 2.539660816 0.059689807 465638.8 0.028697201 1.542160461 199.035656 SEDFGVNEDLADSDAR ddPTM_A459_MK2206_30min_R1 5 SEDFGVNEDLADSDAR 16 0 P04083 P04083 ANXA1 Annexin A1 0 ;;;; 341.16 1.93E-152 200706400 8013.09 8547.37 9062.67 7604.36 9026.09 7933.41 9142.06 7541.26 8707.54 9188.79 FALSE TRUE 7331.534617 7990.934659 8447.52121 8190.049125 8666.561722 8382.592818 8532.209858 7475.327559 9612.719943 10327.16668 0.709927015 0.773778027 0.817990207 0.793058675 0.839200334 0.811703062 0.826190777 0.723850771 0.930818708 1 13.33415688 -14.52287874 0.145356437 1.713107005 0.735065219 0.637669776 0.050114197 90.4006651 0.789104085 18.52078701 0.27453622 3.00E-15 14.52287874 -0.978041787 SEDFGVNEDLADSDAR ddPTM_A459_MK2206_30min_R2 6 SEDFGVNEDLADSDAR 16 0 P04083 P04083 ANXA1 Annexin A1 0 ;;;;; 388.29 7.02E-273 341768500 343794.4 373744 349073.1 402086.1 340365.4 404612 392489 334775.3 314936.1 372608.1 FALSE TRUE 370115.5636 355184.4164 360711.0229 369234.3794 327000.9442 420009.7932 340954.7228 378531.5812 342328.6727 360449.9282 1.026815473 0.985391836 1.000724358 1.024370795 0.907202134 1.165237555 0.945914248 1.050164119 0.949726012 1 18.45943934 -3.452290075 15.89845628 1.006818509 1.018583723 0 0.067170257 0 0 0.014140843 0 0.000352947 3.452290075 0.011765214 SEDGYHS(ph)DGDYGEHDYR ddPTM_A459_MK2206_30min_R1 1 SEDGYHSDGDYGEHDYR 17 0 P52756;C9JR02;C9J9P7;C9JFQ5;P52756-4;P52756-2;P52756-5 P52756 RBM5 RNA-binding protein 5 1 SEDGYHS(0.999)DGDYGEHDYR 107.09 0.0016419 13676000 2528.8 2337.9 2384.2 1595.9 2314.6 2503.9 2615.3 2244.2 2252 2626.3 TRUE FALSE 2313.712281 2185.702285 2222.367147 1718.816495 2222.404581 2645.668654 2440.838109 2224.579196 2486.103459 2951.665872 0.783866597 0.740497868 0.75291962 0.582320821 0.752932302 0.896330672 0.826935776 0.753669044 0.842271303 1 11.5273137 -6.593964793 6.315470164 0.845146865 0.713268767 0.451634189 0.077344045 0.217501456 14.97371969 0.025774262 0.025796113 2.55E-07 6.593964793 -0.131878098 SEDMPFS(ph)PK ddPTM_A459_MK2206_30min_R1 4 SEDMPFSPK 9 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.016)EDMPFS(0.984)PK;SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK 161.19 0.00092018 246114000 28780.7 31027 32431 27725 21130 17836.9 22923.2 24750.5 27075.3 25338.2 TRUE FALSE 26332.75033 29007.13666 30229.67408 29860.3843 20288.34736 18846.80986 21394.03515 24534.10899 29889.87432 28477.28751 0.924693067 1.018606026 1.061536288 1.048568418 0.712439601 0.661818997 0.751266607 0.86153251 1.049603981 1 14.79752411 -6.247325801 24.68370124 0.819230159 1.017168136 0.333811837 0.11825781 756.6956695 1323408.909 0.037192459 0.047766261 5.66E-07 6.247325801 0.197937978 SEDMPFS(ph)PK ddPTM_A459_MK2206_30min_R2 4 SEDMPFSPK 9 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK 140.63 0.0022767 126335100 951966 945662 1007032 860733 862312 618431 1053267 810928 744034 962261 TRUE FALSE 1024849.249 898701.8002 1040605.944 790408.3606 828453.2981 641965.8251 914971.7777 916919.0739 808748.7324 930862.5024 1.100967378 0.965450642 1.117894363 0.849113976 0.889984607 0.68964624 0.982929031 0.985020958 0.868816533 1 19.82820856 -5.767009511 24.9999661 0.88933811 1.051838786 0.400294903 0.092906837 138.8523183 623202.6074 0.026536648 0.040646251 1.71E-06 5.767009511 0.162500676 SEDPPGQEAGS(ph)EEEGSSASGLAK ddPTM_A459_MK2206_30min_R1 2 SEDPPGQEAGSEEEGSSASGLAK 23 0 K7EIG1;I3L2B0;A0A494C0R8;O75153 K7EIG1 CLUH Clustered mitochondria protein homolog 1 SEDPPGQEAGS(1)EEEGSSASGLAK;SEDPPGQEAGS(1)EEEGSSASGLAK 111.5 9.58E-06 18031600 9668.5 10549.5 10857.2 9541.5 10134 10042.4 10254.9 9540.8 9152.4 8756.2 TRUE FALSE 8846.143304 9862.725633 10120.24351 10276.38798 9730.341321 10610.99201 9570.814332 9457.385791 10103.82473 9840.984162 0.898908398 1.002209278 1.028377177 1.044243931 0.988756933 1.078245004 0.972546462 0.961020324 1.026708769 1 13.26458689 -4.764053344 4.572208457 1.012499931 0.889986341 0.51613513 0.032791096 0.164063629 7.767167987 0.008367861 0.065930211 1.72E-05 4.764053344 -0.122513591 SEDPPT(ph)TPIR ddPTM_A459_MK2206_30min_R1 1 SEDPPTTPIR 10 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0;H7C151 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.001)EDPPT(0.583)T(0.416)PIR 106.29 0.028041 79560000 16044 15622 12993 11220 13121 11686 12916 11073 10223 9729.2 TRUE FALSE 14679.37355 14605.00496 12111.07136 12084.16634 12598.36279 12347.65122 12054.39721 10976.18993 11285.71743 10934.52675 1.342479093 1.33567783 1.107599043 1.105138487 1.152163516 1.129235083 1.102415997 1.003810241 1.032117594 1 13.41660316 -1.522878745 0.306821997 1.017483422 4.20022923 0.829818348 0.04743509 22.90800931 0.326954051 0.051018288 40.32643272 0.03 1.522878745 3.182745807 SEDSGIGLSASS(ph)PELSEHLR ddPTM_A459_MK2206_30min_R2 1 SEDSGIGLSASSPELSEHLR 20 0 Q9Y3R5-2;Q9Y3R5 Q9Y3R5-2 DOPEY2 Protein dopey-2 1 SEDSGIGLS(0.022)AS(0.073)S(0.904)PELSEHLR 68.088 0.0090812 2281000 12758 17274 13758 19951 18535 23661 19609 14699 20921 18462 TRUE FALSE 13734.76229 16416.19828 14216.68485 18320.93948 17807.22277 24561.43594 17034.31475 16620.20977 22740.67076 17859.58645 0.769041452 0.919181322 0.796025423 1.025832235 0.997068035 1.375252221 0.953791108 0.930604402 1.273303322 1 14.12441105 -5.938135251 2.396882389 1.092279512 0.834521045 0.41098022 0.138242517 0.303784903 3.53474613 0.042569786 0.068322854 1.15E-06 5.938135251 -0.257758467 SEDSIAGSGVEHSTPDT(ph)EPGKEESWVSIK ddPTM_A459_MK2206_30min_R1 1 SEDSIAGSGVEHSTPDTEPGKEESWVSIK 29 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SEDSIAGSGVEHS(0.025)T(0.235)PDT(0.724)EPGKEES(0.01)WVS(0.005)IK 55.171 0.0041014 7112600 1793.3 1654.2 1288.4 1444.6 1403.4 1311.8 1525.8 1316.7 1612 1830.4 TRUE FALSE 1640.770418 1546.511279 1200.946998 1555.863342 1347.499606 1386.072982 1424.016666 1305.188231 1779.573169 2057.163771 0.797588622 0.751768674 0.583787744 0.756314769 0.655027872 0.673778628 0.692223286 0.634460051 0.865061496 1 11.00644094 -8.486273311 3.720569763 0.998840247 0.692255525 0.734882603 0.060130577 0.096251907 3.077464084 0.057499894 0.01513824 3.26E-09 8.486273311 -0.306584722 SEEAHAEDSVMDHHFR ddPTM_A459_MK2206_30min_R1 4 SEEAHAEDSVMDHHFR 16 0 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 ;;; 111.66 0.00090746 41749500 12190.5 8384.81 9455.1 8144.31 13345.2 13818.6 13661.1 10382.1 9289.5 10097.6 FALSE TRUE 11153.63396 7838.957345 8813.314155 8771.586167 12813.63243 14600.99719 12749.79295 10291.33039 10255.17677 11348.56692 0.982823121 0.69074425 0.776601505 0.772924566 1.129096961 1.286593919 1.123471627 0.906839645 0.903653901 1 13.47022251 -6.256527666 24.96072814 1.06829367 0.795473278 0.488469951 0.126161429 362.4658582 1842005.492 0.041351018 0.051652136 5.54E-07 6.256527666 -0.272820392 SEEAHAEDSVMDHHFR ddPTM_A459_MK2206_30min_R2 7 SEEAHAEDSVMDHHFR 16 0 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 ;;;;;; 162.88 2.04E-05 86901500 144843 192892 164846 233456 209288 246282 230321 176141 191518 171013 FALSE TRUE 155932.2914 183313.2638 170341.8834 214381.898 201070.3015 255654.4341 200079.576 199163.2335 208175.8895 165432.8598 0.942571455 1.108082542 1.029673812 1.295884616 1.215419366 1.545366709 1.209430679 1.203891619 1.258370856 1 17.3358863 -5.757539664 24.97130865 1.264966673 1.034906533 0.364618921 0.131532573 100.0365119 640558.6841 0.035423195 0.058514827 1.75E-06 5.757539664 -0.23006014 SEEDNEIES(ph)EEEVQPK ddPTM_A459_MK2206_30min_R1 2 SEEDNEIESEEEVQPK 16 0 P52701-2;P52701;P52701-3;A0A087WWJ1;A0A494C0M1;C9J7Y7 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 SEEDNEIES(1)EEEVQPK;SEEDNEIES(1)EEEVQPK 291.06 1.12E-74 27943000 8050.2 8130.3 8390.3 5335.4 6290.7 6757.8 9221.5 6697.3 10109.3 14214.1 TRUE FALSE 7365.488217 7601.015992 7820.789813 5746.333432 6040.128098 7140.420796 8606.350561 6638.746212 11160.19791 15975.05002 0.461061982 0.475805458 0.489562775 0.359706757 0.378097602 0.446973298 0.538737002 0.415569667 0.698601751 1 13.96353283 -8.549906498 2.386661657 0.99973864 0.44481571 0.92009658 0.051401281 0.08202783 1.108591601 0.052662122 0.014364544 2.82E-09 8.549906498 -0.55492293 down SEEDNEIES(ph)EEEVQPK ddPTM_A459_MK2206_30min_R2 2 SEEDNEIESEEEVQPK 16 0 P52701-2;P52701;P52701-3;A0A087WWJ1;A0A494C0M1;C9J7Y7 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 SEEDNEIES(1)EEEVQPK;SEEDNEIES(1)EEEVQPK 270.79 1.63E-50 103709000 133590 91280 113516 100507 89079 78125 122288 80980 77207 116969 TRUE FALSE 143817.7531 86747.16793 117300.5668 92295.25659 85581.31087 81098.10162 106231.4387 91564.36405 83922.3253 113152.3111 1.271010302 0.766640708 1.036660813 0.815672748 0.756337277 0.716716263 0.938835784 0.809213379 0.741675751 1 16.78790653 -4.755652396 24.99811492 0.838084192 1.271010999 0.593862074 0.106276819 130.4183656 563313.0532 0.026103705 0.227123683 1.76E-05 4.755652396 0.432926807 SEEEFIHINNK ddPTM_A459_MK2206_30min_R2 1 SEEEFIHINNK 11 0 Q15046;Q15046-2;J3KRL2;H3BVA8 Q15046 KARS Lysine--tRNA ligase 0 107.45 0.014803 4171600 33583 42719 39798 50586 35178 42857 48274 41281 27202 44051 FALSE TRUE 36154.1403 40597.63658 41124.84546 46452.96198 33796.73496 44487.95317 41935.56581 46676.56844 29567.98079 42613.61948 0.848417495 0.952691583 0.965063422 1.090096607 0.793097028 1.043984381 0.984088334 1.095343907 0.693862224 1 15.37902697 -4.759531391 4.09592495 0.964147672 0.835975577 0.068007649 0.119769221 0.672854815 21.67825947 0.02829432 0.263385962 1.74E-05 4.759531391 -0.128172095 SEEEQS(ph)SSSVKKDETNVK ddPTM_A459_MK2206_30min_R1 1 SEEEQSSSSVKKDETNVK 18 2 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 S(0.001)EEEQS(0.332)S(0.222)S(0.222)S(0.222)VKKDETNVK 75.018 0.017844 10392000 2711.5 2902.1 2923.9 2919.6 2443.5 2051.8 2493.7 2935.8 2780.1 3145.3 TRUE FALSE 2480.872686 2713.172763 2725.433814 3144.468098 2346.170221 2167.971143 2327.349823 2910.13261 3069.101344 3534.96351 0.701809985 0.76752497 0.770993479 0.889533397 0.663704226 0.613293783 0.658380155 0.823242617 0.86821302 1 11.78747961 -8.381071341 1.772755315 0.991818411 0.728880436 0.568983903 0.075519275 0.273446404 1.762128398 0.079398889 0.023038363 4.16E-09 8.381071341 -0.262937975 SEEEQSSSS(ph)VK ddPTM_A459_MK2206_30min_R2 1 SEEEQSSSSVK 11 0 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 SEEEQS(0.001)S(0.007)S(0.017)S(0.974)VK 138.24 0.0037266 0 60343 25700 36129 25358 27029 23559 35554 43787 29122 52132 TRUE FALSE 64962.90648 24423.77537 37333.52283 23286.17028 25967.70565 24455.55425 30885.71709 49510.11124 31654.97892 50430.93711 1.288155846 0.484301438 0.740290087 0.461743755 0.514916183 0.484931585 0.612435915 0.981740854 0.627689683 1 15.62202141 -10.42112735 8.153484876 1 0.672616937 0.119877419 0.249938224 1.53E-09 2.17E-10 0.237723348 0.05765638 3.79E-11 10.42112735 -0.327383063 SEEEQSSSS(ph)VKKDETNVK ddPTM_A459_MK2206_30min_R2 1 SEEEQSSSSVKKDETNVK 18 2 B4DY08;G3V4W0;G3V2Q1;P07910;G3V4C1;P07910-2;P07910-4;B2R5W2;G3V2D6;P07910-3;G3V5V7 B4DY08;G3V2Q1 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 S(0.001)EEEQS(0.19)S(0.132)S(0.132)S(0.531)VKKDET(0.013)NVK 62.792 0.045873 6414000 8156.2 8640.1 11029 5015.6 5764.8 3947.8 9428.2 6876.7 5451.1 9307.5 TRUE FALSE 8780.644943 8211.045198 11396.70136 4605.809436 5538.444986 4098.036295 8190.266015 7775.508301 5925.226825 9003.797037 0.975215779 0.911953608 1.265766133 0.511540788 0.61512326 0.455145344 0.909645784 0.863581028 0.658080896 1 13.13631782 -5.765285106 24.99999166 0.703451956 1.03707601 0.410060533 0.183364746 97.53170839 634032.6069 0.052430874 0.081200933 1.72E-06 5.765285106 0.333624054 SEEHS(ph)PPR ddPTM_A459_MK2206_30min_R2 2 SEEHSPPR 8 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 SEEHS(1)PPR;S(0.001)EEHS(0.999)PPR 105.98 0.0092109 15876700 48404 57835 46471 63586 71392 62090 55420 61661 67237 59107 TRUE FALSE 52109.84746 54962.998 48020.31995 58390.8204 68588.79136 64452.87846 48143.28743 69720.30441 73085.15272 57178.34343 0.911356369 0.961255516 0.839834054 1.021205178 1.199558911 1.127225355 0.841984649 1.2193481 1.2781964 1 15.8031812 -5.982213015 6.097565084 1.109751797 0.911661054 0.379574073 0.118399895 0.184284394 24.85767705 0.035333377 0.051370841 1.04E-06 5.982213015 -0.198090744 SEEIS(ph)ESESEETNAPK ddPTM_A459_MK2206_30min_R1 3 SEEISESESEETNAPK 16 0 P54259 P54259 ATN1 Atrophin-1 1 SEEIS(0.772)ES(0.227)ES(0.001)EETNAPK;SEEIS(0.78)ES(0.218)ES(0.001)EETNAPK;SEEIS(0.999)ES(0.001)ESEETNAPK 207.85 6.77E-08 25384000 10719.95 11483.04 12102.38 10913.26 10834.1 10378 12117 11997.05 11844.24 10686.39 TRUE FALSE 9808.16196 10735.49201 11280.90416 11753.80118 10402.55486 10965.59339 11308.69704 11892.16106 13075.49113 12010.30067 0.81664583 0.893857057 0.939269089 0.978643374 0.866136089 0.913015726 0.941583175 0.990163476 1.088689741 1 13.55198465 -7.796124066 2.121576967 1.043914841 0.905434419 0.610245642 0.04552381 0.228335463 2.010261251 0.033416661 0.01353136 1.60E-08 7.796124066 -0.138480422 SEEIS(ph)ESESEETNAPK ddPTM_A459_MK2206_30min_R2 2 SEEISESESEETNAPK 16 0 P54259 P54259 ATN1 Atrophin-1 1 SEEIS(0.999)ES(0.001)ESEETNAPK;S(0.001)EEIS(0.981)ES(0.018)ESEETNAPK 175.27 1.48E-06 48561000 105580 107647 104206 118225 123101 91755 146355 104994 86749 118497 TRUE FALSE 113663.286 102301.4065 107680.176 108565.6393 118267.4362 95246.80082 127138.4127 118717.0763 94294.27121 114630.4526 0.991562743 0.892445281 0.939367974 0.947092477 1.031727901 0.830903121 1.109115508 1.035650419 0.822593552 1 16.80663083 -6.019243088 23.69757652 0.974748222 0.937419451 0.025569399 0.08628349 1557.361303 1917871.356 0.025029213 0.032896521 9.57E-07 6.019243088 -0.037328771 SEEKIS(ph)DSEGFK ddPTM_A459_MK2206_30min_R1 1 SEEKISDSEGFK 12 1 P23246;P23246-2 P23246 SFPQ "Splicing factor, proline- and glutamine-rich" 1 SEEKIS(0.798)DS(0.202)EGFK 147.56 0.0029732 12739000 1015.8 1616.2 1526.2 1284.6 729.88 737.33 962.63 1029.8 1462 1119.6 TRUE FALSE 929.4008758 1510.985086 1422.605796 1383.540115 700.8073341 779.0769874 898.4147091 1020.796567 1613.980132 1258.304501 0.738613647 1.200810365 1.130573558 1.099527272 0.556945742 0.619148217 0.713988314 0.811247649 1.282662608 1 10.29726537 -6.221425484 24.87680736 0.804817966 1.059997105 0.169802187 0.223673026 784.8290434 487931.2463 0.068095052 0.087909216 6.01E-07 6.221425484 0.255179139 SEENEEDCSR ddPTM_A459_MK2206_30min_R2 1 SEENEEDCSR 10 0 E7EPP7;Q6ZWJ1 E7EPP7 STXBP4 Syntaxin-binding protein 4 0 143.5 0.023381 0 2750 3843.4 2962.5 2387.5 2715.4 3417.3 2504.1 2240.8 2761 3006.4 FALSE TRUE 2960.542114 3652.542345 3061.268271 2192.433613 2608.779752 3547.347746 2175.308662 2533.680254 3001.146789 2908.301414 1.017962616 1.255902269 1.052596631 0.753853642 0.897011479 1.219731809 0.747965342 0.871189018 1.031924262 1 11.50596108 -5.52891123 24.94868183 0.927206697 1.141261718 0.264050009 0.140146058 176.5044142 729970.9536 0.037957354 0.0659784 2.96E-06 5.52891123 0.214055021 SEEPAGQILSHLS(ph)SELK ddPTM_A459_MK2206_30min_R1 2 SEEPAGQILSHLSSELK 17 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SEEPAGQILSHLS(0.65)S(0.35)ELK;SEEPAGQILS(0.017)HLS(0.767)S(0.215)ELK 125.77 0.00080741 7175200 2667.7 2778.9 2884.5 2177.69 2514.8 1978.44 2376.1 2434.1 2869.5 2370.09 TRUE FALSE 2440.798106 2597.993105 2688.708177 2345.416061 2414.630191 2090.457563 2217.594704 2412.81892 3167.794794 2663.714642 0.916313657 0.97532711 1.009382962 0.880505751 0.906489814 0.784790356 0.832519621 0.905809835 1.189239547 1 11.37922382 -8.240622966 23.71606434 1.094619727 0.900747737 0.524839295 0.073540005 296.7303306 338065.4742 0.053279081 0.020075834 5.75E-09 8.240622966 -0.19387199 SEEPAGQILSHLS(ph)SELK ddPTM_A459_MK2206_30min_R2 1 SEEPAGQILSHLSSELK 17 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SEEPAGQILS(0.005)HLS(0.678)S(0.317)ELK 68.458 0.02416 2144600 12254 15925 16402 13267 15901 13750 16565 11638 14652 17361 TRUE FALSE 13192.17566 15134.18766 16948.83449 12183.04366 15276.64684 14273.26589 14389.9956 13159.12656 15926.40448 16794.51199 0.78550515 0.901138876 1.009188865 0.725418141 0.90962136 0.849876787 0.856827255 0.783537299 0.948310048 1 14.03570225 -8.484037056 6.424907232 0.999897702 0.857390915 0.307401815 0.074697025 0.212474484 24.7190154 0.070282331 0.018201321 3.28E-09 8.484037056 -0.142506788 SEEPAGQILSHLSS(ph)ELK ddPTM_A459_MK2206_30min_R2 1 SEEPAGQILSHLSSELK 17 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SEEPAGQILS(0.023)HLS(0.41)S(0.567)ELK 88.036 0.0068134 2353300 13313 18345 17467 17654 16670 13710 19614 14212 13365 19944 TRUE FALSE 14332.25352 17434.01398 18049.34106 16211.61173 16015.45204 14231.74366 17038.65824 16069.5572 14527.46354 19293.22891 0.742864431 0.903633811 0.935527233 0.840274679 0.830107397 0.737654838 0.883141869 0.832911757 0.75298249 1 14.23580699 -1.571806227 23.19179104 0.842792978 0.003117559 0 0.082470541 0 0 0.018216229 0 0.02680364 1.571806227 -0.839675418 SEERPS(ph)SPDTSTPGSR ddPTM_A459_MK2206_30min_R1 1 SEERPSSPDTSTPGSR 16 1 J3KP16;Q9UFD9;A6NNM3;A6NJZ7 J3KP16 RIMBP3C;RIMBP3;RIMBP3B RIMS-binding protein 3A;RIMS-binding protein 3B;RIMS-binding protein 3C 1 SEERPS(0.635)S(0.279)PDT(0.085)S(0.001)TPGSR 151.11 0.0009999 2080500 609.52 739.38 680.74 657.47 687.32 699.97 545.25 598.05 572.41 455 TRUE FALSE 557.6771233 691.2462276 634.5332655 708.1084533 659.942589 739.6016965 508.8773674 592.8213119 631.9140679 511.3688351 1.09055751 1.351756658 1.240852437 1.384731342 1.290541276 1.446317503 0.995127846 1.159283224 1.235730503 1 8.998220429 -7.266316265 24.99798865 1.110809 1.303734177 0.445671905 0.110627794 412.8197428 2116024.12 0.044243413 0.030906314 5.42E-08 7.266316265 0.192925177 SEES(ph)PVYSNSSVR ddPTM_A459_MK2206_30min_R2 1 SEESPVYSNSSVR 13 0 Q03188;H0Y8J2 Q03188 CENPC Centromere protein C 1 S(0.01)EES(0.99)PVYSNSSVR 156.2 0.00036531 19851000 73893 98037 81026 84913 98644 100530 97387 75207 76258 82409 TRUE FALSE 79550.30489 93168.62514 83727.3664 77975.33628 94770.74091 104355.7396 84599.96992 85036.81312 82890.783 79720.00108 0.997871347 1.168698242 1.050268004 0.978115093 1.188795028 1.309028326 1.061213858 1.066693577 1.039773982 1 16.28265411 -7.501328048 24.96216266 1.044730947 1.118101936 0.133997305 0.092288312 1773.947931 2054770.958 0.041840994 0.027893354 3.15E-08 7.501328048 0.073370989 SEESVS(ph)PK ddPTM_A459_MK2206_30min_R1 2 SEESVSPK 8 0 F5H212;P15822;C9J2N3 F5H212 HIVEP1 Zinc finger protein 40 1 SEES(0.007)VS(0.993)PK;SEES(0.019)VS(0.981)PK 96.665 0.020894 21477900 10313 13556 12663 10775.7 5598.3 5798.2 9264.9 8644.5 3747.9 11500.2 TRUE FALSE 9435.825194 12673.50194 11803.47084 11605.64628 5375.307856 6126.489073 8646.855426 8568.922048 4137.507617 12924.9316 0.730048366 0.980546925 0.913232751 0.897927095 0.415886755 0.474005532 0.669005895 0.662976201 0.320118338 1 13.65786903 -6.243432163 24.23457391 0.571598294 0.889931847 0.374843341 0.182416963 534.6086115 719489.2516 0.051379063 0.066172767 5.71E-07 6.243432163 0.318333552 SEESVS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SEESVSPK 8 0 F5H212;P15822;C9J2N3 F5H212 HIVEP1 Zinc finger protein 40 1 SEES(0.005)VS(0.995)PK;SEES(0.128)VS(0.872)PK 89.08 0.03017 54050000 279830 232810 253170 199458 191881 149415 260900 200611 167236 271030 TRUE FALSE 301254 221248.9939 261610.5614 183161.6434 184346.7878 155101.0925 226643.5166 226831.5465 181781.885 262186.3133 1.149007346 0.843861722 0.997804035 0.698593458 0.703113696 0.591568227 0.864436872 0.865154034 0.693330947 1 18.00023285 -3.860043135 0.895477762 0.772120098 2.554644988 0.407525008 0.12628906 9.439507435 1.741148382 0.042694104 24.33821438 0.000138025 3.860043135 1.78252489 SEETLLT(ph)PER ddPTM_A459_MK2206_30min_R2 2 SEETLLTPER 10 0 Q6P4F7-3;Q6P4F7;H3BQ41 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 SEETLLT(1)PER;S(0.047)EET(0.012)LLT(0.941)PER 129 0.0070681 27347000 75701 92438 103844 97571 96438 113892 106370 85728 87329 96843 TRUE FALSE 81496.72676 87847.66334 107306.1071 89599.13719 92651.35956 118226.2399 92403.49123 96932.94395 94924.71857 93683.02084 0.869919928 0.937711685 1.145416813 0.95640743 0.988987745 1.261981507 0.986341926 1.034690631 1.013254245 1 16.51549998 -5.049723623 6.14831508 1.049602854 0.884825499 0.321260979 0.086554704 0.205857773 18.98806543 0.022022385 0.063087409 8.92E-06 5.049723623 -0.164777355 SEEVPAFGVAS(ph)PPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK ddPTM_A459_MK2206_30min_R1 2 SEEVPAFGVASPPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK 44 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 1 SEEVPAFGVAS(0.989)PPPLT(0.008)DT(0.001)PDT(0.001)T(0.001)ANAEGDLPTTMGGPLPPHLALK;S(0.001)EEVPAFGVAS(0.594)PPPLT(0.112)DT(0.058)PDT(0.112)T(0.112)ANAEGDLPT(0.007)T(0.004)MGGPLPPHLALK 97.389 2.73E-17 50636000 9314.4 8867.1 8371 7480.1 9322.3 8504.5 8935.3 8338.1 8263.3 8353.3 TRUE FALSE 8522.161368 8289.850178 7802.799843 8056.218598 8950.973051 8986.017441 8339.24244 8265.200871 9122.299606 9388.169868 0.907755344 0.883010245 0.831131089 0.858124503 0.953431092 0.957163917 0.888271363 0.880384674 0.971680288 1 13.19662823 -6.25639044 24.93578824 0.933930698 0.868157488 0.445540469 0.038629515 447.167431 2208473.377 0.011944181 0.014947083 5.54E-07 6.25639044 -0.06577321 SEEVPAFGVAS(ph)PPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK ddPTM_A459_MK2206_30min_R2 2 SEEVPAFGVASPPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK 44 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 1 SEEVPAFGVAS(0.981)PPPLT(0.01)DT(0.003)PDT(0.003)T(0.003)ANAEGDLPTTMGGPLPPHLALK;SEEVPAFGVAS(0.994)PPPLT(0.002)DT(0.002)PDT(0.001)T(0.001)ANAEGDLPTTMGGPLPPHLALK 96.071 3.24E-17 21292500 194148 224109 208496 236342 226450 207603 235172 185659 197025 223805 TRUE FALSE 209012.1202 212980.0729 215447.1526 217032.1026 217558.4352 215503.4776 204293.6339 209925.2688 214161.8784 216502.2612 0.965403867 0.983731402 0.99512657 1.002447279 1.004878351 0.995386729 0.943609701 0.969621599 0.989190031 1 17.72402257 SEGPSLS(ph)PSGK ddPTM_A459_MK2206_30min_R2 1 SEGPSLSPSGK 11 0 A8MU93 A8MU93 C17orf100 Uncharacterized protein C17orf100 1 SEGPS(0.006)LS(0.966)PS(0.028)GK 122.18 0.0042268 12099000 47113 47470 39921 57454 46702 40849 57084 46352 40010 53498 TRUE FALSE 50720.0075 45112.70883 41251.94622 52759.82441 44868.24482 42403.53732 49588.80223 52410.36555 43489.99748 51752.36464 0.980051981 0.871703335 0.797102635 1.019466932 0.866979608 0.819354586 0.958193941 1.012714412 0.840348026 1 15.65933716 -10.20431301 0.311527009 1.038664975 0.894693183 0.103721294 0.077237442 24.54409801 2.3193619 1.030955874 0.08288033 6.25E-11 10.20431301 -0.143971792 SEIPS(ph)PQSQLLEDAEANLVGR ddPTM_A459_MK2206_30min_R1 5 SEIPSPQSQLLEDAEANLVGR 21 0 Q9ULJ8-3;Q9ULJ8;Q9ULJ8-4;Q9ULJ8-5 Q9ULJ8-3 PPP1R9A Neurabin-1 1 S(0.026)EIPS(0.939)PQS(0.035)QLLEDAEANLVGR;S(0.248)EIPS(0.752)PQSQLLEDAEANLVGR;S(0.004)EIPS(0.891)PQS(0.106)QLLEDAEANLVGR;S(0.049)EIPS(0.744)PQS(0.207)QLLEDAEANLVGR;SEIPS(0.998)PQS(0.002)QLLEDAEANLVGR 208.62 1.06E-17 36788400 7495.5 7559.89 7946.19 7284.83 7641.91 7815.53 7433.75 7624.28 6407.72 5732.72 TRUE FALSE 6857.968365 7067.739787 7406.824762 7845.908869 7337.516543 8258.038555 6937.858101 7557.621724 7073.825424 6442.932633 1.064417208 1.096975584 1.149604564 1.217754292 1.138847317 1.281720456 1.0768168 1.173009583 1.097920128 1 12.65350179 -8.605247251 3.074858472 1.000031706 1.151888188 0.354524116 0.061805957 0.398128045 9.087320407 0.06016511 0.015993197 2.48E-09 8.605247251 0.151856482 SEIPS(ph)PQSQLLEDAEANLVGR ddPTM_A459_MK2206_30min_R2 3 SEIPSPQSQLLEDAEANLVGR 21 0 Q9ULJ8-3;Q9ULJ8;Q9ULJ8-4;Q9ULJ8-5 Q9ULJ8-3 PPP1R9A Neurabin-1 1 S(0.01)EIPS(0.68)PQS(0.311)QLLEDAEANLVGR;SEIPS(0.789)PQS(0.21)QLLEDAEANLVGR;S(0.028)EIPS(0.971)PQS(0.001)QLLEDAEANLVGR 174.7 2.93E-11 50657100 40886 57096 49531 56810 56730 52298 61618 40917.5 45568 55475 TRUE FALSE 44016.2636 54260.69567 51182.33882 52168.44127 54502.49515 54288.23704 53527.48258 46265.55774 49531.42227 53664.85529 0.820206509 1.01110299 0.953740368 0.972115568 1.015608723 1.011616201 0.997440174 0.862120237 0.922976909 1 15.71168997 -4.751777485 24.98709955 0.970400149 0.820206207 0.493068443 0.046109235 374.5631214 968608.0514 0.012488911 0.159811558 1.77E-05 4.751777485 -0.150193942 SEIPSPQS(ph)QLLEDAEANLVGR ddPTM_A459_MK2206_30min_R2 1 SEIPSPQSQLLEDAEANLVGR 21 0 Q9ULJ8-3;Q9ULJ8;Q9ULJ8-4;Q9ULJ8-5 Q9ULJ8-3 PPP1R9A Neurabin-1 1 S(0.004)EIPS(0.173)PQS(0.823)QLLEDAEANLVGR 69.456 0.006941 22911000 10442 12986 11382 15044 13690 13409 14534 12592 13606 13139 TRUE FALSE 11241.44755 12341.13412 11761.4702 13814.85708 13152.46181 13919.28889 12625.66834 14237.81763 14789.42529 12710.27551 0.884437756 0.970957248 0.925351319 1.086904613 1.034789671 1.095120942 0.993343404 1.120181669 1.163580229 1 13.63370768 -5.759198526 24.9994452 1.071883228 0.931319589 0.606879312 0.052936777 40.10085443 447361.8313 0.014568075 0.023748478 1.74E-06 5.759198526 -0.140563639 SEIS(ph)PEGEK ddPTM_A459_MK2206_30min_R1 2 SEISPEGEK 9 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 SEIS(1)PEGEK;S(0.273)EIS(0.727)PEGEK 121.36 0.0059279 2636100 7439.4 7900.3 7776.6 6827.4 5939.5 6017.9 6995.3 6079.4 7941.9 7960 TRUE FALSE 6806.639964 7385.989034 7248.746059 7353.247531 5702.917138 6358.628297 6528.656301 6026.248447 8767.488925 8946.144895 0.760846157 0.825605791 0.810264773 0.821945946 0.637472029 0.710767417 0.729773146 0.673614 0.980029837 1 13.12705041 -8.274768801 23.80337563 0.99001509 0.748223233 0.729642144 0.059335241 262.8971193 469466.9935 0.061493729 0.016307023 5.31E-09 8.274768801 -0.241791858 SEIS(ph)PEGEK ddPTM_A459_MK2206_30min_R2 1 SEISPEGEK 9 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 S(0.008)EIS(0.992)PEGEK 80.763 0.045583 4139500 54152 54269 43507 57250 46232 43185 56899 45377 34859 59055 TRUE FALSE 58297.91876 51574.08037 44957.50167 52572.49187 44416.69938 44828.43544 49428.09295 51307.9297 37890.97281 57128.04019 1.020478185 0.902780495 0.786960335 0.920257227 0.777493841 0.784701091 0.865215974 0.89812165 0.663264006 1 15.80191142 -4.867896471 2.886916034 0.833350372 1.036006003 0.288083538 0.087999152 0.401023928 5.349820705 0.021245904 0.174865248 1.36E-05 4.867896471 0.202655631 SELCS(ph)SPLGK ddPTM_A459_MK2206_30min_R1 2 SELCSSPLGK 10 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 SELCS(0.5)S(0.5)PLGK;SELCS(0.75)S(0.25)PLGK 150.04 0.00072519 70944000 15823.9 15869.9 16153.4 14527.3 14033.8 13163.1 14590.9 13841.5 14862.8 13535.1 TRUE FALSE 14477.99421 14836.76663 15056.95221 15646.19516 13474.80403 13908.38335 13617.56768 13720.48522 16407.84125 15211.93037 0.951752595 0.975337532 0.989812065 1.028547645 0.885805003 0.914307587 0.895189982 0.901955563 1.078616641 1 13.89291562 -3.941616406 15.02866654 0.957081367 0.965752987 0 0.060772162 1984078.922 0.058267102 0.01461766 7820478.051 0.000114389 3.941616406 0.00867162 SELCS(ph)SPLGK ddPTM_A459_MK2206_30min_R2 4 SELCSSPLGK 10 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 SELCS(0.5)S(0.5)PLGK;SELCS(0.674)S(0.325)PLGK;SELCS(0.5)S(0.5)PLGK;SELCS(0.5)S(0.5)PLGK 169.82 0.00022362 103532100 292297 301001 291730 285935 334280 248038 359136 268256 282406 330652 TRUE FALSE 314675.4831 286053.728 301456.1326 262573.1958 321154.4876 257477.2599 311981.0118 303317.9803 306969.1634 319862.8523 0.98378252 0.894301186 0.942454338 0.820893061 1.004038091 0.804961433 0.975358687 0.948275106 0.959689946 1 18.28709393 SELCSS(ph)PLGK ddPTM_A459_MK2206_30min_R1 2 SELCSSPLGK 10 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 SELCS(0.103)S(0.897)PLGK;SELCS(0.204)S(0.796)PLGK 176.48 6.91E-05 73935000 14732.3 15480.1 14398 13876.7 12599 12018.5 12788 13420.3 13885.8 11756.2 TRUE FALSE 13479.24052 14472.34268 13420.70388 14945.48584 12097.15515 12698.97708 11934.93585 13302.96773 15329.2786 13212.64681 1.020177162 1.09534016 1.015746812 1.13115003 0.915573944 0.961122875 0.903296366 1.006835945 1.160197409 1 13.68963188 -6.260085587 24.99992996 0.985616742 1.064166388 0.197754508 0.072908337 206.5466246 3814237.211 0.022720783 0.027754394 5.49E-07 6.260085587 0.078549646 SELCSS(ph)PLGK ddPTM_A459_MK2206_30min_R2 1 SELCSSPLGK 10 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 SELCS(0.366)S(0.634)PLGK 214.67 0.00036144 12065000 128070 153330 135460 145800 151950 118400 153260 126710 126740 162350 TRUE FALSE 137875.1377 145715.8552 139976.1688 133887.6736 145983.6795 122905.795 133136.7779 143271.4321 137763.6161 157052.5328 0.877891844 0.927816015 0.891269732 0.852502479 0.929521332 0.782577605 0.847721304 0.912251649 0.877181753 1 17.26088768 -9.330899254 1.248115977 1.000184633 0.876361288 0.439894851 0.041421593 6.871221575 9.657490388 0.04404016 0.012299973 4.67E-10 9.330899254 -0.123823345 SELDTEKVPLS(ph)PLPGPK ddPTM_A459_MK2206_30min_R1 2 SELDTEKVPLSPLPGPK 17 1 Q8NHU6-2;Q8NHU6 Q8NHU6-2 TDRD7 Tudor domain-containing protein 7 1 S(0.001)ELDT(0.009)EKVPLS(0.99)PLPGPK;SELDTEKVPLS(1)PLPGPK 99.86 0.0025399 33885000 12058.4 12346.6 11329.3 9905.2 10127.3 7989.7 8943.4 10313.3 8566 7904.7 TRUE FALSE 11032.76976 11542.8341 10560.29868 10668.10022 9723.908196 8442.069909 8346.802104 10223.13191 9456.466354 8883.993913 1.241870477 1.299284332 1.188688194 1.200822549 1.09454242 0.950256156 0.939532623 1.150736032 1.064438635 1 13.11699269 -6.251840542 2.107739754 1.025102059 1.246937508 0.725875793 0.061554258 0.187309118 1.633788696 0.022791023 0.029661855 5.60E-07 6.251840542 0.22183545 SELDTEKVPLS(ph)PLPGPK ddPTM_A459_MK2206_30min_R2 4 SELDTEKVPLSPLPGPK 17 1 Q8NHU6-2;Q8NHU6 Q8NHU6-2 TDRD7 Tudor domain-containing protein 7 1 SELDTEKVPLS(1)PLPGPK;SELDTEKVPLS(1)PLPGPK;SELDTEKVPLS(1)PLPGPK;SELDTEKVPLS(1)PLPGPK 85.945 0.0062955 29944400 201506 218560 206417 216475 212661 148500 221348 150748 161591 234359 TRUE FALSE 216933.4543 207706.6282 213298.8398 198788.3 204310.8606 154151.2716 192284.7417 170451.2812 175645.8931 226711.885 0.956868469 0.916170002 0.940836603 0.876832284 0.901191663 0.679943495 0.848145838 0.75184096 0.774753794 1 17.7905005 -6.553386645 24.99720066 0.796954047 0.919197071 0.306682566 0.079849303 212.4841718 174101.3475 0.024536699 0.024536941 2.80E-07 6.553386645 0.122243023 SELGNQS(ph)PSTSSR ddPTM_A459_MK2206_30min_R1 2 SELGNQSPSTSSR 13 0 A0A0A0MSK5;J3KN66;Q5JTV8;Q5JTV8-3;H0YD16 A0A0A0MSK5 TOR1AIP1 Torsin-1A-interacting protein 1 1 SELGNQS(0.999)PS(0.001)TSSR;SELGNQS(1)PSTSSR 233.28 2.28E-39 10034000 9174.5 8886.9 6718.7 6637.3 9582.7 7692.4 8927.2 7713.9 7827.1 6430.2 TRUE FALSE 8394.160598 8308.361195 6262.653363 7148.505996 9201.000767 8127.93704 8331.682777 7646.458186 8640.755055 7226.821722 1.161528667 1.14965631 0.866584732 0.989163186 1.273173896 1.124690404 1.152883397 1.058066531 1.195650784 1 12.81914559 -5.034041466 24.99108162 1.086495255 1.158561178 0.066625697 0.108978299 1713.49703 1257941.817 0.029399824 0.077872543 9.25E-06 5.034041466 0.072065923 SELGNQS(ph)PSTSSR ddPTM_A459_MK2206_30min_R2 1 SELGNQSPSTSSR 13 0 A0A0A0MSK5;J3KN66;Q5JTV8;Q5JTV8-3;H0YD16 A0A0A0MSK5 TOR1AIP1 Torsin-1A-interacting protein 1 1 SELGNQS(0.99)PS(0.009)T(0.001)SSR 127.3 0.001941 3840200 22079 21202 20432 26965 20137 22985 24912 18716 22825 20904 TRUE FALSE 23769.38522 20149.13951 21113.19268 24761.87324 19346.3202 23859.71028 21641.02448 21162.24546 24810.27724 20221.90419 1.175427645 0.99640169 1.044075399 1.224507495 0.95670121 1.179894339 1.070177381 1.046501124 1.226901137 1 14.30363123 SELLMIIQMETQS(ph)S(ph)MR ddPTM_A459_MK2206_30min_R2 1 SELLMIIQMETQSSMR 16 0 H0Y8C6;O00410-2;O00410;O00410-3;E7EV12;E7EQT5;H0Y3V4;E7ETV3 H0Y8C6 IPO5 Importin-5 2 SELLMIIQMET(0.079)QS(0.929)S(0.992)MR 52.966 0.041741 0 3694.1 11473 5581.4 19490 13932 21658 8269.1 11296 10820 5354.3 TRUE FALSE 3976.923136 10903.2675 5767.48109 17897.60465 13384.95968 22482.21037 7183.357237 12772.42598 11761.10404 5179.589629 0.767806606 2.105044662 1.113501552 3.455409779 2.584173773 4.340538918 1.386858371 2.465914657 2.270663293 1 12.33862208 -3.326993092 10.21765212 2.24781046 1.469515674 0 1.086036837 0 0 0.247450507 0 0.000470985 3.326993092 -0.778294785 SELS(ph)PVAR ddPTM_A459_MK2206_30min_R1 1 SELSPVAR 8 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.324)ELS(0.676)PVAR 83.647 0.038396 26280000 3153.6 3616.2 3266.9 3123.6 3219.4 3042.7 3429.2 2873 2811 2586.6 TRUE FALSE 2885.36976 3380.784723 3045.15193 3364.180213 3091.164481 3214.975045 3200.444325 2847.881664 3103.213509 2907.047536 0.992543027 1.162961624 1.047506755 1.157249812 1.063334687 1.105924483 1.100926038 0.979647436 1.067479452 1 11.50533895 -7.746604103 24.99410024 1.017672582 1.093396805 0.302613787 0.051526863 254.605639 428954.9021 0.022259643 0.012784679 1.79E-08 7.746604103 0.075724223 SELSQDAEPAGS(ph)QETK ddPTM_A459_MK2206_30min_R1 2 SELSQDAEPAGSQETK 16 0 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 SELSQDAEPAGS(1)QETK;SELSQDAEPAGS(0.791)QET(0.209)K 300.2 5.16E-88 31256000 10702.4 11787.8 10561.7 9749.3 8716.6 7949.2 10360.2 9272.4 11487.5 10776.6 TRUE FALSE 9792.104679 11020.41208 9844.801231 10500.19278 8369.399364 8399.276834 9669.089961 9191.332384 12681.66673 12111.68657 0.80848399 0.909899048 0.812834874 0.866947202 0.69101849 0.69348532 0.798327294 0.758881295 1.047060346 1 13.56411216 -8.263047888 24.99541769 1.023530203 0.793071489 0.668407364 0.065092699 93.54382443 1453554.413 0.058412688 0.018133993 5.46E-09 8.263047888 -0.230458713 SELSQDAEPAGS(ph)QETK ddPTM_A459_MK2206_30min_R2 3 SELSQDAEPAGSQETK 16 0 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 SELSQDAEPAGS(0.956)QET(0.044)K;SELSQDAEPAGS(1)QETK;SELSQDAEPAGS(1)QETK 258.68 5.50E-39 64613500 253559 264056 236314 216552 225935 183055 276061 204911 176484 255156 TRUE FALSE 272971.672 250943.363 244192.5908 198859.0089 217063.6567 190021.2863 239813.8591 231693.5713 191834.2593 246830.2806 1.105908365 1.016663605 0.989313751 0.805650783 0.879404488 0.769845927 0.971573903 0.938675639 0.777190946 1 17.91315987 -5.428335549 2.351327291 0.875011383 1.071217262 0.480045604 0.077491354 0.256315945 2.723097396 0.021448623 0.057346217 3.73E-06 5.428335549 0.196205879 SEMT(ph)PEELQK ddPTM_A459_MK2206_30min_R1 2 SEMTPEELQK 10 0 K7ERG4;P62316 K7ERG4 SNRPD2 Small nuclear ribonucleoprotein Sm D2 1 S(0.021)EMT(0.979)PEELQK;S(0.008)EMT(0.992)PEELQK 130.1 0.0066338 13195600 6418 8096.4 6730.7 4846.7 5484.6 5133.3 6828.4 5583.9 7294.3 8217.2 TRUE FALSE 5872.115398 7569.322888 6273.838837 5219.993674 5266.136768 5423.94301 6372.889895 5535.080551 8052.568588 9235.208773 0.635840027 0.819615785 0.679339146 0.565227468 0.5702239 0.587311358 0.690064519 0.599345471 0.871942236 1 13.17292886 -8.437202002 3.445083303 0.997598954 0.645289316 0.733653093 0.072310171 0.120801195 2.714181993 0.076172208 0.020202467 3.65E-09 8.437202002 -0.352309638 SEMT(ph)PEELQK ddPTM_A459_MK2206_30min_R2 4 SEMTPEELQK 10 0 K7ERG4;P62316 K7ERG4 SNRPD2 Small nuclear ribonucleoprotein Sm D2 1 SEMT(1)PEELQK;SEMT(1)PEELQK;S(0.006)EMT(0.994)PEELQK;SEMT(1)PEELQK 160.18 0.0010438 18060700 191832 186797 156622 162354 146506 124702 178973 157403 110119 181326 TRUE FALSE 206518.8054 177520.9326 161843.6993 149089.1589 140753.4383 129447.622 155473.6301 177976.1125 119696.9516 175409.3475 1.177353479 1.012038042 0.922662912 0.849949909 0.802428379 0.73797448 0.886347463 1.014633001 0.682386391 1 17.4203661 -4.890154291 1.33044478 0.848844702 1.274308973 0.520124077 0.097528932 0.860444614 1.564524553 0.028677708 0.47294417 1.29E-05 4.890154291 0.425464271 SENPTGPTEGS(ph)DR ddPTM_A459_MK2206_30min_R1 1 SENPTGPTEGSDR 13 0 Q6GPG7;Q92633;Q92633-2 Q6GPG7 LPAR1 Lysophosphatidic acid receptor 1 1 SENPTGPTEGS(1)DR 131.86 0.0014815 2648800 1024.5 880.06 1009.8 1049.5 1264.6 1129 1194 966.72 1183.6 1065.8 TRUE FALSE 937.3608951 822.767934 941.2575895 1130.332672 1214.228304 1192.923004 1114.350439 958.268069 1306.639456 1197.83935 0.78254308 0.686876695 0.785796183 0.943642961 1.013682097 0.995895655 0.93030041 0.799997152 1.090830298 1 10.22621872 -5.71175363 3.519531924 0.962637462 0.735062686 0.649444881 0.073363081 0.143323659 3.615130773 0.020793348 0.036875848 1.94E-06 5.71175363 -0.227574776 SENPTGPTEGS(ph)DR ddPTM_A459_MK2206_30min_R2 1 SENPTGPTEGSDR 13 0 Q6GPG7;Q92633;Q92633-2 Q6GPG7 LPAR1 Lysophosphatidic acid receptor 1 1 SENPTGPTEGS(1)DR 136.33 0.0014997 0 12037 9192.7 10198 13201 9796.4 13012 12684 8819.4 10318 11185 TRUE FALSE 12958.56197 8736.203885 10537.99623 12122.43607 9411.744113 13507.18078 11018.57556 9972.125862 11215.44099 10820.03437 1.197645177 0.807409994 0.973933712 1.120369461 0.869844198 1.248349157 1.018349405 0.921635322 1.036543934 1 13.40141746 SEPAVVS(ph)LEYGVAR ddPTM_A459_MK2206_30min_R1 4 SEPAVVSLEYGVAR 14 0 Q9Y217 Q9Y217 MTMR6 Myotubularin-related protein 6 1 SEPAVVS(1)LEYGVAR;SEPAVVS(1)LEYGVAR;SEPAVVS(1)LEYGVAR;SEPAVVS(1)LEYGVAR 174.94 7.66E-05 25289900 13685.3 6214.8 6052.1 5540.18 6994.4 5188.61 6292.86 6196.13 5335.01 6151.8 TRUE FALSE 12521.29337 5810.21539 5641.300314 5966.885624 6715.798237 5482.384614 5873.074791 6141.957889 5889.603381 6913.931428 1.811023656 0.840363468 0.81593235 0.863023547 0.971342905 0.792947496 0.849455169 0.888345213 0.85184579 1 12.75529058 -4.760391368 24.99990446 0.868775398 1.811024771 0.953833427 0.06177822 4.662976084 111180.881 0.014713379 0.087471395 1.74E-05 4.760391368 0.942249372 SEPAVVS(ph)LEYGVAR ddPTM_A459_MK2206_30min_R2 2 SEPAVVSLEYGVAR 14 0 Q9Y217 Q9Y217 MTMR6 Myotubularin-related protein 6 1 SEPAVVS(1)LEYGVAR;S(0.001)EPAVVS(0.999)LEYGVAR 150.9 0.00041203 9294900 49640 22776 23092 23033.6 28060 28513 28484 16482.7 22174.5 25990 TRUE FALSE 53440.47657 21644.97696 23861.87575 21151.6812 26958.22341 29598.0822 24744.01658 18637.04548 24103.19793 25141.94843 2.125550322 0.860910881 0.949086179 0.841290454 1.07224082 1.177238999 0.984172593 0.741272918 0.958684566 1 14.61780884 -4.758680876 24.99996155 0.953749768 2.125551887 0.902478772 0.11554699 23.0357316 208730.0686 0.031147582 0.209417025 1.74E-05 4.758680876 1.171802119 SEPHS(ph)PGIPEIFR ddPTM_A459_MK2206_30min_R1 4 SEPHSPGIPEIFR 13 0 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR;S(0.006)EPHS(0.994)PGIPEIFR;SEPHS(1)PGIPEIFR 138.81 0.00064038 51607600 10204.3 9394 9510.1 7269.3 9819.7 9352.3 8673.7 8471.6 7360.8 6387 TRUE FALSE 9336.3707 8782.448893 8864.580909 7829.182746 9428.560555 9881.819144 8095.093299 8397.533694 8125.981501 7178.269779 1.300643607 1.223477128 1.234918885 1.090678253 1.313486515 1.376629668 1.127722076 1.169854847 1.132025091 1 12.80942043 -8.404154768 0.95382667 1.005420819 1.243620595 0.488206115 0.077905501 0.506076986 1.008860542 0.077803981 0.026854735 3.94E-09 8.404154768 0.238199775 SEPHS(ph)PGIPEIFR ddPTM_A459_MK2206_30min_R2 3 SEPHSPGIPEIFR 13 0 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR;S(0.005)EPHS(0.995)PGIPEIFR 121.45 0.0018782 26404800 55400 73993 64986 67158 62693 67238 61740 44918 51873 51527 TRUE FALSE 59641.4666 70318.61522 67152.60081 61670.97657 60231.35781 69796.78921 53633.46384 50788.93683 56384.81978 49845.67821 1.196522321 1.410726421 1.347210094 1.237238188 1.208356672 1.400257589 1.075990252 1.018923579 1.131187734 1 15.6051808 -7.329715734 7.413768669 1.0564674 1.300007821 0.710394096 0.076197353 0.161392718 15.50301595 0.031995594 0.021513696 4.68E-08 7.329715734 0.243540421 SEPIS(ph)PPRDR ddPTM_A459_MK2206_30min_R1 1 SEPISPPRDR 10 1 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3 MEF2A Myocyte-specific enhancer factor 2A 1 S(0.002)EPIS(0.998)PPRDR 77.204 0.030568 18060000 2564.4 2446.6 2451.7 2538.8 2446.4 2572.7 2639.6 2815.9 2145.5 1928.4 TRUE FALSE 2346.284314 2287.325895 2285.285435 2734.338816 2348.954708 2718.364051 2463.5171 2791.280883 2368.532403 2167.304751 1.082581632 1.055378066 1.054436592 1.26163098 1.083813759 1.254260182 1.136673142 1.287904196 1.092846957 1 11.08168631 -5.727349533 24.93647688 1.171418321 1.063256551 0.198020675 0.085745486 238.2178212 174252.8098 0.021303361 0.036896067 1.87E-06 5.727349533 -0.10816177 SEPQPEEGS(ph)PAGGQK ddPTM_A459_MK2206_30min_R1 4 SEPQPEEGSPAGGQK 15 0 F8WE91;Q9Y6K1-3;Q9Y6K1 F8WE91 DNMT3A DNA (cytosine-5)-methyltransferase 3A 1 SEPQPEEGS(1)PAGGQK;SEPQPEEGS(1)PAGGQK;SEPQPEEGS(1)PAGGQK;SEPQPEEGS(1)PAGGQK 255.72 5.58E-29 30493200 13004.4 13576.5 14718.1 12115.8 12729.8 12086.1 12552.5 12540.3 11326.9 11269.3 TRUE FALSE 11898.30749 12692.66738 13719.07638 13048.96102 12222.74511 12770.40454 11715.14563 12430.66148 12504.37179 12665.42596 0.939432083 1.002150849 1.083191076 1.030282049 0.965048088 1.008288594 0.924970519 0.981464146 0.987283951 1 13.62860798 -6.262796406 24.97045108 0.975794457 1.017893579 0.163861892 0.039148137 205.1313611 3774595.535 0.012467327 0.014948619 5.46E-07 6.262796406 0.042099121 SEPQPEEGS(ph)PAGGQK ddPTM_A459_MK2206_30min_R2 3 SEPQPEEGSPAGGQK 15 0 F8WE91;Q9Y6K1-3;Q9Y6K1 F8WE91 DNMT3A DNA (cytosine-5)-methyltransferase 3A 1 SEPQPEEGS(1)PAGGQK;SEPQPEEGS(1)PAGGQK;SEPQPEEGS(1)PAGGQK 260.96 1.97E-36 31538600 122757 142041 138931 143816 137057 123664 157219 115743 113483 144703 TRUE FALSE 132155.3703 134987.4505 143562.8902 132065.7728 131675.4535 128370.1202 136575.9564 130871.0075 123353.5462 139981.353 0.944092677 0.964324516 1.025585817 0.94345261 0.940664244 0.917051575 0.975672499 0.934917435 0.88121413 1 17.09487513 -5.964014662 24.99546576 0.939105322 0.9779477 0.178124572 0.035361265 278.1512843 193202.7006 0.00980067 0.01453667 1.09E-06 5.964014662 0.038842378 SEPRPPISS(ph)PR ddPTM_A459_MK2206_30min_R2 2 SEPRPPISSPR 11 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 SEPRPPIS(0.06)S(0.94)PR;SEPRPPIS(0.027)S(0.973)PR 108.31 0.005523 200560000 918420 1188760 1202400 1180800 1080320 1179250 1176200 792390 1160640 1096200 TRUE FALSE 988734.9413 1129727.907 1242487.416 1084324.863 1037901.209 1224127.185 1021763.527 895958.0937 1261590.369 1060431.084 0.932389626 1.065347786 1.171681437 1.022532138 0.978754041 1.154367506 0.963536002 0.844899878 1.189695765 1 20.01621943 SEPSLEPES(ph)FRSPTFGK ddPTM_A459_MK2206_30min_R1 1 SEPSLEPESFRSPTFGK 17 1 Q9C0B5-2;Q9C0B5;H0YEF4 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 SEPSLEPES(0.46)FRS(0.222)PT(0.317)FGK 71.344 0.016451 7875200 1499.7 1418.4 930.01 1201 1370.4 1223.7 1322.3 1213.3 1365.5 1185.7 TRUE FALSE 1372.14264 1326.061902 866.8835124 1293.501228 1315.814066 1292.984836 1234.09178 1202.692246 1507.448611 1332.593468 1.029678348 0.995098606 0.650523609 0.970664542 0.987408462 0.970277033 0.926082717 0.902519992 1.131214169 1 10.38002101 -8.250381194 24.21967706 1.065607088 0.926560492 0.215803893 0.104054153 653.5729724 1431469.691 0.073695618 0.027250592 5.62E-09 8.250381194 -0.139046596 SEPSLEPESFRS(ph)PTFGK ddPTM_A459_MK2206_30min_R1 1 SEPSLEPESFRSPTFGK 17 1 Q9C0B5-2;Q9C0B5;H0YEF4 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 SEPS(0.001)LEPES(0.026)FRS(0.949)PT(0.024)FGK 97.223 0.0031223 8402600 1376.1 1185.2 1020.9 805.51 1464.1 1144.6 1060.3 1104 1005.3 663.88 TRUE FALSE 1259.055469 1108.043265 951.6041524 867.5505198 1405.781797 1209.406263 989.5693216 1094.347844 1109.804533 746.1264664 1.687455848 1.485060931 1.275392571 1.162739239 1.884106596 1.620913233 1.326275593 1.46670557 1.487421479 1 9.543276374 -10.44585632 0.707612434 0.915849498 1.486827855 0.354310745 0.197922182 43.69533162 11.9348689 8.482984007 0.075185464 3.58E-11 10.44585632 0.570978357 SEPSLEPESFRS(ph)PTFGK ddPTM_A459_MK2206_30min_R2 2 SEPSLEPESFRSPTFGK 17 1 Q9C0B5-2;Q9C0B5;H0YEF4 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 SEPS(0.001)LEPES(0.02)FRS(0.742)PT(0.237)FGK;SEPS(0.001)LEPES(0.129)FRS(0.766)PT(0.104)FGK 70.114 0.018 13289600 52421 43615 50408 46784 40247 57099 58502 39293 61944 49053 TRUE FALSE 56434.39206 41449.14252 52088.57756 42961.59755 38666.70056 59271.94246 50820.61713 44428.73001 67331.77715 47452.40463 1.189284137 0.873488769 1.097701538 0.905361865 0.81485229 1.249081957 1.07098086 0.936279844 1.41893288 1 15.53419358 -6.769818236 24.99885545 1.127067929 0.973256547 0.19596104 0.160491266 325.3597042 970725.7146 0.05429226 0.048656708 1.70E-07 6.769818236 -0.153811382 SEPSLEPESFRSPT(ph)FGK ddPTM_A459_MK2206_30min_R1 1 SEPSLEPESFRSPTFGK 17 1 Q9C0B5-2;Q9C0B5;H0YEF4 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 SEPSLEPESFRS(0.057)PT(0.943)FGK 113.4 0.0025221 15947000 2213.1 2118 1699.2 1765.6 1986 1768.2 2034.6 2141.6 2044.2 1746.7 TRUE FALSE 2024.864224 1980.117815 1583.863038 1901.586818 1906.893415 1868.313956 1898.875546 2122.876217 2256.701905 1963.094383 1.031465548 1.008671734 0.806819607 0.968668055 0.971371235 0.951718864 0.967286934 1.081392844 1.14956363 1 10.93891382 -7.748856819 4.815213873 1.088506912 0.953922133 0.407730686 0.06538489 0.173130615 10.35867695 0.035037241 0.018076631 1.78E-08 7.748856819 -0.13458478 SEPSLEPESFRSPT(ph)FGK ddPTM_A459_MK2206_30min_R2 1 SEPSLEPESFRSPTFGK 17 1 Q9C0B5-2;Q9C0B5;H0YEF4 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 SEPSLEPESFRS(0.078)PT(0.922)FGK 96.247 0.0084019 10460000 32482 16786 29878 25942 23746 23297 33298 13554 43338 27447 TRUE FALSE 34968.84689 15952.43165 30874.11761 23822.45562 22813.61273 24183.58366 28925.9326 15325.55434 47107.4609 26551.40664 1.317024268 0.600813052 1.162805347 0.897220096 0.85922426 0.910821185 1.089431268 0.577203104 1.774198314 1 14.69650067 -8.258509469 24.99998501 1.387099134 0.925464772 0.306121604 0.277184243 268.2255941 2288735.082 0.186282371 0.06343768 5.51E-09 8.258509469 -0.461634361 SEPSPDAPESPSSCS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 SEPSPDAPESPSSCSPSK 18 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 SEPSPDAPESPS(0.004)S(0.048)CS(0.757)PS(0.191)K 160.47 1.70E-05 0 13637 14568 16694 13303 12696 11822 14817 12276 13581 16689 TRUE FALSE 14681.05921 13844.5743 17250.56963 12216.10235 12197.49125 12271.89449 12871.5101 13880.51535 14762.25083 16144.4393 0.90935702 0.857544449 1.068514633 0.756675541 0.755522755 0.760131353 0.797272043 0.859770667 0.914386097 1 13.97874972 -5.784861521 24.99999402 0.820998851 0.936379446 0.232104066 0.089086032 307.1598638 327850.8309 0.025130501 0.037299246 1.64E-06 5.784861521 0.115380595 SEPVKEES(ph)SELEQPFAQDTSSVGPDR ddPTM_A459_MK2206_30min_R1 2 SEPVKEESSELEQPFAQDTSSVGPDR 26 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEES(0.773)S(0.227)ELEQPFAQDTSSVGPDR;SEPVKEES(0.749)S(0.251)ELEQPFAQDTSSVGPDR 173.45 6.45E-18 95938000 7699 9849 9720.4 8450.7 6111.8 5360.4 7166.4 6941.7 8131 8330.2 TRUE FALSE 7044.159621 9207.82831 9060.606331 9101.574378 5868.354064 5663.901216 6688.342532 6881.009449 8976.246547 9362.208066 0.752403661 0.983510326 0.967785192 0.972161088 0.626813036 0.604974935 0.71439798 0.734977198 0.95877452 1 13.19263311 -6.245384602 24.91898676 0.748708152 0.927062602 0.205686156 0.134737956 1055.806271 1638740.48 0.040146827 0.05166352 5.68E-07 6.245384602 0.17835445 SEPVKEES(ph)SELEQPFAQDTSSVGPDR ddPTM_A459_MK2206_30min_R2 3 SEPVKEESSELEQPFAQDTSSVGPDR 26 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEES(0.779)S(0.221)ELEQPFAQDTSSVGPDR;SEPVKEES(0.765)S(0.235)ELEQPFAQDTSSVGPDR;SEPVKEES(0.964)S(0.036)ELEQPFAQDTSSVGPDR 131.26 3.17E-09 96560900 147361 137715 145770 123767 131991 101479 168113 125897 109444 149053 TRUE FALSE 158643.0715 130876.2734 150629.899 113654.8402 126808.3701 105340.8545 146039.5612 142352.1702 118963.2413 144189.4128 1.100240776 0.907669092 1.044666846 0.788232908 0.879456873 0.73057274 1.012831374 0.987258131 0.825048379 1 17.13760571 SEPVKEES(ph)SELEQPFAQDTSSVGPDRK ddPTM_A459_MK2206_30min_R1 1 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEES(0.853)S(0.147)ELEQPFAQDTSSVGPDRK 136.59 1.61E-12 17098000 1341.8 1462.7 1677.7 1373 1084.9 1006.9 943.94 1378.3 1104.9 959.79 TRUE FALSE 1227.672864 1367.477964 1563.822398 1478.748698 1041.686136 1063.909808 880.9714849 1366.249668 1219.758309 1078.696031 1.138108261 1.267713911 1.44973408 1.370866913 0.965690153 0.986292502 0.816700404 1.266575225 1.13077111 1 10.07507267 -6.260724494 24.99980944 1.028382811 1.314051256 0.51838416 0.131634696 56.99138489 1993006.135 0.042911874 0.052136832 5.49E-07 6.260724494 0.285668445 SEPVKEES(ph)SELEQPFAQDTSSVGPDRK ddPTM_A459_MK2206_30min_R2 3 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 S(0.003)EPVKEES(0.785)S(0.212)ELEQPFAQDTSSVGPDRK;S(0.002)EPVKEES(0.735)S(0.262)ELEQPFAQDTSSVGPDRK;S(0.015)EPVKEES(0.492)S(0.492)ELEQPFAQDTSSVGPDRK 101.05 3.92E-07 41616500 72607 78832 85483 74202 80968 50795.9 87497 69820 63449 87125 TRUE FALSE 78165.84775 74917.31751 88332.96055 68139.45924 77788.78949 52728.97357 76008.5388 78945.71373 68967.67933 84282.11839 0.927430981 0.888887453 1.04806289 0.808468754 0.922957218 0.625624683 0.901834698 0.936684023 0.818295513 1 16.36293896 -5.784927286 24.99968048 0.851195637 0.948203256 0.150982763 0.102409541 415.1570046 441876.4941 0.028598258 0.042445398 1.64E-06 5.784927286 0.097007619 SEPVKEESS(ph)ELEQPFAQDTSSVGPDR ddPTM_A459_MK2206_30min_R1 1 SEPVKEESSELEQPFAQDTSSVGPDR 26 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEES(0.397)S(0.602)ELEQPFAQDTSSVGPDR 138.61 1.66E-09 44629000 2669.2 3053.9 2853.7 2599 2341.8 2628.1 2476.6 2464.7 2195.8 2404.6 TRUE FALSE 2442.170523 2855.090555 2659.998795 2799.17543 2248.521147 2776.900751 2311.390533 2443.151388 2424.061268 2702.500002 0.903670868 1.056462739 0.984273374 1.035772591 0.832015225 1.027530342 0.855278642 0.904033815 0.896969941 1 11.4000789 -6.238374714 24.99040863 0.916716323 0.998662488 0.234408872 0.06683116 1072.584663 1162138.233 0.018526851 0.023902232 5.78E-07 6.238374714 0.081946165 SEPVKEESS(ph)ELEQPFAQDTSSVGPDR ddPTM_A459_MK2206_30min_R2 2 SEPVKEESSELEQPFAQDTSSVGPDR 26 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 S(0.001)EPVKEES(0.408)S(0.588)ELEQPFAQDT(0.002)S(0.001)SVGPDR;S(0.001)EPVKEES(0.212)S(0.781)ELEQPFAQDT(0.003)S(0.002)SVGPDR 77.543 9.48E-05 19367700 31061 29264.1 23663.6 27083 24438.5 21320.3 36411 23395.9 22984.3 33084 TRUE FALSE 33439.05404 27810.88735 24452.53261 24870.23227 23478.9217 22131.65896 31630.19196 26453.82446 24983.43287 32004.47179 1.044824431 0.868968797 0.764034875 0.777086166 0.733613785 0.691517707 0.98830539 0.826566507 0.78062319 1 14.96598588 -10.11634894 14.87384404 0.999986684 0.825785756 0.187474364 0.105358444 0 0 0.105718221 0.025640435 7.65E-11 10.11634894 -0.174200928 SEPVKEESSELEQPFAQDTS(ph)SVGPDR ddPTM_A459_MK2206_30min_R1 1 SEPVKEESSELEQPFAQDTSSVGPDR 26 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEESSELEQPFAQDT(0.377)S(0.479)S(0.144)VGPDR 68.434 0.00062945 6871000 696.56 806.14 809.17 899.2 817.78 692.64 965.69 697.4 631.9 615.64 TRUE FALSE 637.3139142 753.6601395 754.2457949 968.4565398 785.2060909 731.8566782 901.2705821 691.3027053 697.5882663 691.910131 0.921093485 1.089245706 1.090092139 1.399685445 1.134838263 1.057733722 1.3025833 0.999122103 1.008206463 1 9.434440855 -7.885091251 20.61981927 1.002605631 1.144994562 0.21033328 0.123987115 4.070282358 710.2064374 0.069849948 0.03355479 1.30E-08 7.885091251 0.142388931 SEPVKEESSELEQPFAQDTSS(ph)VGPDR ddPTM_A459_MK2206_30min_R1 1 SEPVKEESSELEQPFAQDTSSVGPDR 26 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEESSELEQPFAQDT(0.296)S(0.296)S(0.408)VGPDR 69.149 0.00056473 8622800 744.54 746.33 783.43 697.51 793.87 468.19 889.05 832.39 665.05 725.09 TRUE FALSE 681.2129633 697.7437813 730.2529544 751.2323411 762.2484769 494.6985132 829.7430967 825.112502 734.1843274 814.9196234 0.835926567 0.85621178 0.89610427 0.921848388 0.935366452 0.607051909 1.018190105 1.012507833 0.900928517 1 9.670513961 SEPVKEESSELEQPFAQDTSS(ph)VGPDRK ddPTM_A459_MK2206_30min_R1 4 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEESSELEQPFAQDT(0.093)S(0.36)S(0.547)VGPDRK;SEPVKEESSELEQPFAQDT(0.095)S(0.247)S(0.658)VGPDRK;SEPVKEESS(0.001)ELEQPFAQDT(0.189)S(0.189)S(0.62)VGPDRK;SEPVKEESSELEQPFAQDT(0.207)S(0.207)S(0.587)VGPDRK 108.31 1.84E-09 85989300 8186.45 9305.09 9662.31 8468.8 8342.95 6458.24 7576.6 8823.69 7470.28 7118.18 TRUE FALSE 7490.149439 8699.32695 9006.459318 9121.068443 8010.632635 6823.899968 7071.178838 8746.545409 8246.842339 8000.033878 0.936264715 1.087411264 1.125802647 1.140128727 1.001324839 0.852983884 0.883893612 1.093313546 1.030850927 1 12.96579039 -6.50852485 24.13290355 0.967480107 1.076468115 0.249346369 0.082016377 612.4555216 1029710.597 0.028182957 0.03076202 3.10E-07 6.50852485 0.108988008 SEPVKEESSELEQPFAQDTSS(ph)VGPDRK ddPTM_A459_MK2206_30min_R2 1 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEESSELEQPFAQDT(0.192)S(0.152)S(0.657)VGPDRK 56.131 0.0034519 6185300 9612.7 12778 12527 12191 13522 9204.1 14389 11043 10332 11161 TRUE FALSE 10348.6557 12143.4631 12944.64393 11194.9563 12991.05834 9554.368475 12499.70702 12486.35802 11230.65868 10796.81748 0.958491307 1.124726163 1.198931439 1.036875572 1.203230337 0.884924515 1.157721434 1.156485051 1.040182322 1 13.3983185 SEPVS(ph)PQDFSFSK ddPTM_A459_MK2206_30min_R1 1 SEPVSPQDFSFSK 13 0 P48552 P48552 NRIP1 Nuclear receptor-interacting protein 1 1 S(0.076)EPVS(0.923)PQDFSFSK 90.707 0.020765 4719200 1784.6 1854.2 1460.8 1255.8 1395.2 1245 1319.1 1314.6 1511.3 1777.4 TRUE FALSE 1632.810399 1733.491243 1361.644966 1352.521934 1339.62623 1315.490824 1231.105246 1303.106591 1668.405043 1997.597731 0.817386991 0.867787952 0.681641226 0.677074224 0.670618618 0.658536403 0.616292874 0.65233684 0.835205716 1 10.96405037 -8.544634713 3.78315596 0.999561585 0.704003223 0.609581136 0.073983044 0.153562413 6.60382851 0.080897787 0.02125576 2.85E-09 8.544634713 -0.295558362 SEPVS(ph)PSR ddPTM_A459_MK2206_30min_R1 1 SEPVSPSR 8 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 SEPVS(0.996)PS(0.003)R 147.73 0.0016673 65699000 4673.1 5218.4 5103.6 4220.3 4839.1 4633.2 5243.6 4811.3 4654.2 5682.7 TRUE FALSE 4275.628306 4878.681212 4757.181851 4545.348237 4646.3484 4895.52778 4893.809011 4769.235311 5138.020745 6386.715778 0.669456487 0.763879493 0.744855731 0.711687884 0.727501984 0.766517245 0.766248128 0.746743002 0.80448558 1 12.64085853 -14.52287875 0.205771173 2.215305715 0.706477261 0.910173785 0.025190147 38.34524836 0.380142712 19.13404707 0.055589216 3.00E-15 14.52287875 -1.508828454 SEPVS(ph)PSR ddPTM_A459_MK2206_30min_R2 1 SEPVSPSR 8 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 S(0.034)EPVS(0.862)PS(0.103)R 82.831 0.040368 113180000 98797 118350 100460 140940 84890 106560 147350 95429 130600 143990 TRUE FALSE 106360.9743 112472.9111 103809.2863 129424.7512 81556.79206 110615.2155 128002.768 107901.898 141959.3519 139291.6181 0.763584886 0.807463598 0.745265851 0.929163958 0.585511125 0.794126861 0.918955281 0.774647459 1.019152149 1 17.08774892 -8.143891024 1.188290749 1.016425426 0.777486754 0.443571925 0.09391335 0.431888041 1.152403397 0.085348409 0.028487834 7.18E-09 8.143891024 -0.238938671 SEPVSPS(ph)RER ddPTM_A459_MK2206_30min_R1 1 SEPVSPSRER 10 1 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 SEPVS(0.041)PS(0.959)RER 113.22 0.036829 42198000 7705.4 6932.9 7865.1 7757.3 8948.3 8014.5 7770.2 8370.8 5232.9 4293.7 TRUE FALSE 7050.015267 6481.56695 7331.238925 8354.76859 8591.870263 8468.274064 7251.864136 8297.614978 5776.878681 4825.635972 1.460950496 1.3431529 1.519227511 1.731330055 1.780463821 1.754851405 1.502778945 1.719486307 1.197122766 1 12.23650337 -8.429503782 3.90656702 1.004927023 1.601353746 0.686199188 0.138753382 0.132222766 3.496367222 0.150005686 0.039475716 3.72E-09 8.429503782 0.596426723 SEQSSMSIEFGQES(ph)PEQSLAMDFSR ddPTM_A459_MK2206_30min_R1 5 SEQSSMSIEFGQESPEQSLAMDFSR 25 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.001)EQS(0.005)S(0.004)MS(0.002)IEFGQES(0.987)PEQS(0.002)LAMDFSR;SEQSSMSIEFGQES(1)PEQSLAMDFSR;SEQSSMSIEFGQES(0.989)PEQS(0.011)LAMDFSR;SEQSSMSIEFGQES(1)PEQSLAMDFSR;SEQSSMSIEFGQES(1)PEQSLAMDFSR 216.04 1.27E-34 72636700 8168.7 7519.54 8286.5 6669.53 7829.1 7408 8276.7 7228.15 7101.79 6872.7 TRUE FALSE 7473.909169 7030.016579 7724.035468 7183.218356 7517.250369 7827.434558 7724.576445 7164.955047 7840.046485 7724.141962 0.967603807 0.9101356 0.999986213 0.929969748 0.973214942 1.013372695 1.00005625 0.927605303 1.015005488 1 12.91515896 -6.516530925 24.23065292 0.987909357 0.952274535 0.250498786 0.031776525 299.9842598 1145093.9 0.010056093 0.010413879 3.04E-07 6.516530925 -0.035634823 SEQSSMSIEFGQES(ph)PEQSLAMDFSR ddPTM_A459_MK2206_30min_R2 1 SEQSSMSIEFGQESPEQSLAMDFSR 25 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SEQSSMSIEFGQES(0.937)PEQS(0.062)LAMDFSR 89.129 0.00011413 2414500 4389.8 5455.4 5007.8 5905.8 4043.4 5686.4 5811.6 6144.8 5231.9 6140.8 TRUE FALSE 4725.886463 5184.492769 5174.757553 5423.277248 3884.6358 5902.799937 5048.529939 6947.946458 5686.961205 5940.426199 0.795546701 0.87274761 0.871108803 0.912944133 0.653932171 0.993666067 0.849859887 1.169604036 0.957332187 1 12.53635073 -7.736471428 24.80957127 1.047601054 0.852069729 0.456649127 0.096074232 168.1530203 167086.613 0.043368657 0.025025165 1.83E-08 7.736471428 -0.195531324 SEREEVSSWR ddPTM_A459_MK2206_30min_R1 1 SEREEVSSWR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 123.11 0.01199 8191100 1794.6 1941.6 1852.3 1690.1 2009.6 2267.7 1937 1689.1 1328.9 1081.9 FALSE TRUE 1641.959846 1815.201487 1726.571037 1820.271795 1929.553377 2396.095214 1807.786264 1674.332377 1467.043911 1215.93394 1.350369286 1.492845481 1.419954637 1.497015368 1.586889973 1.970580091 1.486747104 1.376992879 1.206516129 1 10.24784914 -8.278765457 1.68139147 1.017175212 1.550869745 0.564557278 0.157796546 0.282586075 1.520831959 0.161762571 0.048286038 5.26E-09 8.278765457 0.533694533 SERPPTILMTEEPS(ph)SPK ddPTM_A459_MK2206_30min_R2 1 SERPPTILMTEEPSSPK 17 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SERPPTILMTEEPS(0.959)S(0.041)PK 78.249 0.010447 14625000 67654 52664 46581 39584 39748 28474 53303 33539 37011 50055 TRUE FALSE 72833.64226 50048.78234 48133.98729 36349.86058 38187.2938 29557.59802 46304.25207 37922.66246 40230.14988 48421.70945 1.504152643 1.033602137 0.994057993 0.750693459 0.788639935 0.610420375 0.956270495 0.783174797 0.830828782 1 15.56336639 -4.296470054 1.069496453 0.80783186 2.706442146 0.774024553 0.110004838 1.883474012 0.867760422 0.033522584 5.21377098 5.05E-05 4.296470054 1.898610286 SERPPTILMTEEPSS(ph)PK ddPTM_A459_MK2206_30min_R1 3 SERPPTILMTEEPSSPK 17 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SERPPTILMTEEPS(0.415)S(0.585)PK;SERPPTILMTEEPS(0.362)S(0.638)PK;SERPPTILMTEEPS(0.218)S(0.782)PK 111.45 0.0011142 26693200 8778.4 9882.5 9956.9 8387.3 5082.9 5445 6805.6 5729.1 8220.2 9026.8 TRUE FALSE 8031.750983 9239.147454 9281.05337 9033.291299 4880.43733 5753.291195 6351.610842 5679.011083 9074.719206 10145.10813 0.791687075 0.910699751 0.914830404 0.890408577 0.481063116 0.567100037 0.626076209 0.55977827 0.894492113 1 13.30849662 -6.226710484 23.99482195 0.656924177 0.882029219 0.254196515 0.152857388 438.100258 302690.8106 0.043613633 0.056301401 5.93E-07 6.226710484 0.225105043 SERPPTILMTEEPSS(ph)PK ddPTM_A459_MK2206_30min_R2 1 SERPPTILMTEEPSSPK 17 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SERPPTILMT(0.001)EEPS(0.024)S(0.975)PK 64.476 0.025101 14045000 38194 30741 27503 26261 27237 16451 30299 21253 18911 29436 TRUE FALSE 41118.16201 29214.44664 28419.93629 24115.3923 26167.53853 17077.05433 26320.7049 24030.84007 20555.8446 28475.50573 1.443983555 1.025950054 0.998048518 0.846881967 0.918949035 0.599710309 0.924327917 0.84391267 0.721878122 1 14.79743384 -1.522884052 0.742761949 0.820460029 105.404799 0.731060453 0.109978593 173.4258736 0.772283466 0.039624821 30318.58327 0.029999633 1.522884052 104.584339 SES(ph)DLEDVGPTAEWNGDGSGSLRR ddPTM_A459_MK2206_30min_R1 1 SESDLEDVGPTAEWNGDGSGSLRR 24 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 S(0.283)ES(0.717)DLEDVGPTAEWNGDGSGSLRR 64.246 0.0016194 3929300 767.7 638.87 575.66 448.76 763.84 584.85 523.21 516.7 530.39 455.91 TRUE FALSE 702.4030836 597.2794469 536.5858031 483.323573 733.4146353 617.9637016 488.3076156 512.1825464 585.5259385 512.3915727 1.370832623 1.165669926 1.047218244 0.94326995 1.431355772 1.206037988 0.952996969 0.999592057 1.142731399 1 9.001102938 -4.803496103 3.181183054 1.09679958 1.403812422 0.270335059 0.138483013 0.478563347 7.558978167 0.037414181 0.359962806 1.57E-05 4.803496103 0.307012842 SES(ph)ELIDELSEDFDR ddPTM_A459_MK2206_30min_R1 3 SESELIDELSEDFDR 15 0 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7EVY3;E7ES10;E9PDE4;H0Y9H6;A0A0A0MR45;H0Y7F0;E7EQA0;H0YD33;E7EQ12;D6RC54;P20810-5;E9PCH5;P20810-2;P20810-3 P20810-6;P20810-5 CAST Calpastatin 1 S(0.076)ES(0.923)ELIDELS(0.001)EDFDR;S(0.346)ES(0.654)ELIDELSEDFDR;S(0.003)ES(0.997)ELIDELSEDFDR 257.48 3.19E-36 6019300 588.56 550.877 920.46 510.13 679.062 548.6 890.792 564.887 955.42 746.807 TRUE FALSE 538.4998813 515.0148072 857.9817397 549.420301 652.0135226 579.6612579 831.368891 559.9482525 1054.739328 839.3270893 0.641585251 0.613604414 1.022225722 0.654596174 0.77682888 0.690626176 0.990518359 0.667139497 1.256648739 1 9.713089334 -8.25842952 24.99025095 1.128324382 0.763992434 0.505327241 0.146774743 196.3639298 1630406.178 0.105107366 0.035872812 5.52E-09 8.25842952 -0.364331948 SES(ph)ELIDELSEDFDRSECK ddPTM_A459_MK2206_30min_R1 1 SESELIDELSEDFDRSECK 19 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7EVY3;E7ES10;E9PDE4;H0Y9H6;A0A0A0MR45;H0Y7F0;E7EQA0;H0YD33;E7EQ12;D6RC54;P20810-5;E9PCH5;P20810-2;P20810-3 P20810-6;P20810-5 CAST Calpastatin 1 S(0.322)ES(0.678)ELIDELSEDFDRSECK 119.62 0.00024329 2798300 548.27 553.41 572.71 589.53 610.82 452.67 453.91 542.04 473.18 390.17 TRUE FALSE 501.6367574 517.3829084 533.8360409 634.9357027 586.489746 478.2997842 423.6304921 537.3010014 522.3687543 438.5072052 1.143964686 1.17987322 1.217394001 1.447948164 1.337468892 1.090745553 0.966074188 1.225295719 1.191243264 1 8.776456738 -6.774347768 24.98620518 1.100715337 1.268064569 0.386945922 0.107241727 278.8534659 539761.028 0.041228368 0.036588175 1.68E-07 6.774347768 0.167349232 SES(ph)ENWR ddPTM_A459_MK2206_30min_R2 2 SESENWR 7 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JHW1;C9IYH5;C9JH78 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 S(0.009)ES(0.991)ENWR;S(0.204)ES(0.796)ENWR 97.965 0.022161 52415000 142645 121496 152775 159610 163937 125139 139678 111937 120922 174731 TRUE FALSE 153566.0109 115462.6853 157868.4422 146569.3524 157500.0097 129901.2523 121338.1108 126567.5502 131439.577 169029.5418 0.908515809 0.683091749 0.933969533 0.867122699 0.93178984 0.768512125 0.717851504 0.748789525 0.777613047 1 17.36691589 -6.797531302 24.97316856 0.781558673 0.858758586 0.069923635 0.098706464 370.2308057 256172.0997 0.033723322 0.029742061 1.59E-07 6.797531302 0.077199913 SES(ph)ETSTMAAK ddPTM_A459_MK2206_30min_R1 1 SESETSTMAAK 11 0 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.053)ES(0.927)ET(0.004)S(0.008)T(0.008)MAAK 111.94 0.0079606 7923400 2135.7 2208.8 2048.9 1611.9 2013.3 2226.6 2449.6 2714.9 1894.1 1944.7 TRUE FALSE 1954.0475 2065.006719 1909.826377 1736.048817 1933.105998 2352.668168 2286.191654 2691.163916 2090.998473 2185.624118 0.894045542 0.944813292 0.873812821 0.794303468 0.884464068 1.076428535 1.046013189 1.23130226 0.956705435 1 11.09382959 -6.755811824 7.261290013 1.075928248 0.876594378 0.595279952 0.075354353 0.088227943 26.45879026 0.02539847 0.024094776 1.75E-07 6.755811824 -0.19933387 SES(ph)ETSTMAAK ddPTM_A459_MK2206_30min_R2 2 SESETSTMAAK 11 0 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.011)ES(0.981)ET(0.002)S(0.003)T(0.003)MAAK;S(0.005)ES(0.353)ET(0.162)S(0.162)T(0.317)MAAK 133.05 0.0018947 15408100 45020 60565 52633 54627 56178 61178 79630 57637 66699 87790 TRUE FALSE 48466.76581 57557.43017 54387.75795 50163.79936 53972.16945 63506.17166 69174.48535 65170.3538 72500.35846 84925.41949 0.570697985 0.677740899 0.64041789 0.590680619 0.63552432 0.747787553 0.81453216 0.76738336 0.85369444 1 16.37390882 -7.921668497 0.429921962 1.005109354 0.594128627 0.899405969 0.040309781 0.321076439 0.159919228 0.050958664 0.037537574 1.20E-08 7.921668497 -0.410980727 SES(ph)FSSEDLIPSR ddPTM_A459_MK2206_30min_R1 1 SESFSSEDLIPSR 13 0 Q9P219;A0A0A0MR69;Q9P219-3;Q9P219-2 Q9P219 CCDC88C Protein Daple 1 S(0.145)ES(0.85)FS(0.004)SEDLIPSR 99.834 0.01142 3606000 1191.7 1645.8 1225.6 1077.1 1429.9 1453.1 1151.4 1321.5 1280.4 1242.9 TRUE FALSE 1090.339657 1538.658121 1142.409687 1160.058429 1372.944055 1535.373266 1074.592207 1309.946265 1413.502162 1396.879835 0.780553652 1.101496408 0.817829607 0.830464009 0.982864825 1.099144842 0.769280349 0.937765892 1.011899611 1 10.4479922 -6.286286072 24.73045943 0.960452884 0.893596916 0.113972432 0.11257778 1967.588013 1958378.137 0.035292758 0.040035239 5.17E-07 6.286286072 -0.066855968 SES(ph)LDPDSSMDTTLILK ddPTM_A459_MK2206_30min_R1 1 SESLDPDSSMDTTLILK 17 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.039)ES(0.937)LDPDS(0.022)S(0.001)MDTTLILK 211.49 2.77E-09 3084400 1805.7 1741.9 1603.3 1527.3 1904.2 2039.4 1462.6 1569.6 1417.5 1402.7 TRUE FALSE 1652.115733 1628.501993 1494.472463 1644.932911 1828.351682 2154.869066 1365.032623 1555.877153 1564.854198 1576.477066 1.047979554 1.033000751 0.947982369 1.043423305 1.159770555 1.36688894 0.865875345 0.986932945 0.992627315 1 10.62248847 SES(ph)LESPR ddPTM_A459_MK2206_30min_R2 1 SESLESPR 8 0 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;Q5VY93 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.291)ES(0.708)LESPR 85.807 0.037516 0 47821 48057 50287 58400 46124 58091 60482 44314 59105 47516 TRUE FALSE 51482.21253 45670.55926 51963.54348 53628.53319 44312.94001 60301.69371 52540.64075 50105.99195 64245.84606 45965.55681 1.120017163 0.993582204 1.13048872 1.166711271 0.964046627 1.311888681 1.143043713 1.090076906 1.397695373 1 15.4882656 -6.759594361 24.99999846 1.191327152 1.078628915 0.187983185 0.117828238 85.25806615 1155250.003 0.038147531 0.036299125 1.74E-07 6.759594361 -0.112698237 SES(ph)LSNCSIGK ddPTM_A459_MK2206_30min_R1 3 SESLSNCSIGK 11 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.016)ES(0.946)LS(0.03)NCS(0.008)IGK;S(0.001)ES(0.832)LS(0.167)NCSIGK;S(0.046)ES(0.477)LS(0.477)NCSIGK 171.99 0.0002735 36579900 6411.6 5985.7 5983.8 4750.3 6264.1 6068 6409.9 6042.6 6759.8 6766.8 TRUE FALSE 5866.259751 5596.029842 5577.636328 5116.168929 6014.587633 6411.564916 5982.307267 5989.770185 7462.5054 7605.122271 0.771356402 0.735823783 0.733405214 0.672726716 0.790860083 0.843058755 0.786615527 0.787596829 0.981247261 1 12.89275573 -8.1872034 0.735350261 1.012728037 0.740118308 0.775328053 0.047313941 0.308451668 0.362343259 0.047398479 0.019676795 6.50E-09 8.1872034 -0.272609729 SES(ph)LSNCSIGK ddPTM_A459_MK2206_30min_R2 3 SESLSNCSIGK 11 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.005)ES(0.985)LS(0.01)NCSIGK;S(0.001)ES(0.999)LSNCSIGK;S(0.002)ES(0.997)LS(0.001)NCSIGK 155.88 0.00054005 50786000 225646 274778 235876 276159 259567 216833 295281 243021 235398 246469 TRUE FALSE 242921.6313 261132.9241 243739.9881 253595.9263 249375.0954 225084.7318 256510.25 274784.6791 255872.4925 238426.7367 1.018852309 1.095233394 1.022284629 1.063622016 1.045919173 0.94404149 1.075845157 1.152491046 1.0731703 1 17.8631865 -7.504643039 24.91566536 1.090532032 1.034033537 0.130886061 0.050562478 1115.997048 1524807.906 0.021194801 0.013962244 3.13E-08 7.504643039 -0.056498494 SES(ph)MPVQLNK ddPTM_A459_MK2206_30min_R1 2 SESMPVQLNK 10 0 C9J3F6;Q92609;Q92609-2 C9J3F6;Q92609 TBC1D5 TBC1 domain family member 5 1 S(0.057)ES(0.943)MPVQLNK;S(0.023)ES(0.977)MPVQLNK 133.42 0.002274 20005500 6009 5676.6 7964.9 7911.2 9406.3 7188 9599.8 10000 10055.9 9111.8 TRUE FALSE 5497.902995 5307.052308 7424.264779 8520.521995 9031.627153 7594.978348 8959.414858 9912.571054 11101.24679 10240.63857 0.53687111 0.518234509 0.724980647 0.83203034 0.881939841 0.741650854 0.874888298 0.967964154 1.08403853 1 13.32201806 -4.569881928 0.308320733 1.035639417 1.19E-15 0.842250768 0.07074377 3.552523396 0.249093225 0.085277883 1.421991001 2.69E-05 4.569881928 -1.035639417 SES(ph)MPVQLNK ddPTM_A459_MK2206_30min_R2 1 SESMPVQLNK 10 0 C9J3F6;Q92609;Q92609-2 C9J3F6;Q92609 TBC1D5 TBC1 domain family member 5 1 S(0.001)ES(0.999)MPVQLNK 173.04 0.00012617 20252000 44346 58249 73656 79050 68796 65749 89334 53828 41417 68067 TRUE FALSE 47741.16386 55356.43936 76111.65428 72591.36213 66094.72337 68251.12427 77604.33849 60863.50442 45019.3758 65845.97936 0.725042961 0.840695816 1.155904355 1.102441832 1.003777664 1.03652683 1.178573684 0.924331372 0.683707285 1 16.00680773 -10.75684517 20.7442624 1 0.976331596 0 0.162266705 0 0 0.165819123 0.040217045 1.75E-11 10.75684517 -0.023668404 SES(ph)PCESPYPNEK ddPTM_A459_MK2206_30min_R1 1 SESPCESPYPNEK 13 0 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H0Y594;B7ZBA0;B7ZB98 A0A0C4DG98 THOC2 THO complex subunit 2 1 SES(1)PCESPYPNEK 166.86 0.000321 6850800 1508.5 1497.8 1626.3 1157.8 1338.9 1121.5 1598.2 1257.7 1632.1 2181.7 TRUE FALSE 1380.194154 1400.292948 1515.911287 1246.973957 1285.568778 1184.998361 1491.586994 1246.704061 1801.762636 2451.985467 0.562888391 0.571085337 0.618238284 0.50855683 0.524297063 0.483281152 0.60831804 0.508446758 0.734817828 1 11.25973471 -8.571900911 2.826529405 0.999549314 0.549154985 0.915785335 0.042595908 0.076383078 1.522448734 0.041672774 0.011160746 2.68E-09 8.571900911 -0.450394329 SES(ph)PDLILHDSGVSAAR ddPTM_A459_MK2206_30min_R1 2 SESPDLILHDSGVSAAR 17 0 P0CG40 P0CG40 SP9 Transcription factor Sp9 1 S(0.158)ES(0.842)PDLILHDSGVSAAR;S(0.003)ES(0.997)PDLILHDSGVSAAR 139 0.00050751 11436700 5104.5 2611.4 2591.33 2053.43 9552.3 9090.8 7031.2 4368.1 2816 2015.44 TRUE FALSE 4670.33547 2441.397385 2415.437739 2211.585534 9171.811664 9605.51324 6562.161477 4329.910162 3108.733277 2265.127923 2.061841816 1.077818767 1.066358202 0.976362311 4.049136285 4.240605196 2.897037916 1.911552155 1.372431661 1 11.14537681 -6.230314467 24.85748024 2.723074527 1.263665515 0.269852448 1.01668542 832.6187407 664959.3095 0.322203408 0.41592001 5.88E-07 6.230314467 -1.459409012 SES(ph)PDLILHDSGVSAAR ddPTM_A459_MK2206_30min_R2 3 SESPDLILHDSGVSAAR 17 0 P0CG40 P0CG40 SP9 Transcription factor Sp9 1 S(0.212)ES(0.788)PDLILHDSGVSAAR;S(0.173)ES(0.827)PDLILHDSGVSAAR;S(0.168)ES(0.832)PDLILHDSGVSAAR 131.98 0.00049113 15940300 13315.3 39374.2 21180.4 71421 61234 119107 55533 37263.4 60958 24893.5 TRUE FALSE 14334.72961 37418.93448 21886.54396 65585.67584 58829.64548 123639.7003 48241.45039 42133.85432 66260.01665 24081.22713 0.595265745 1.553863276 0.908863317 2.723518842 2.442967095 5.134277405 2.003280403 1.749655617 2.751521602 1 14.55562129 -5.763562251 24.96131126 2.656076963 1.072783812 0.309331232 1.033306194 64.7829623 761752.1531 0.292772174 0.459529428 1.72E-06 5.763562251 -1.583293151 SES(ph)PEPAATCSLPSDLTR ddPTM_A459_MK2206_30min_R2 1 SESPEPAATCSLPSDLTR 18 0 Q9NS37;E9PIM0 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 S(0.006)ES(0.994)PEPAATCSLPSDLTR 145.69 0.00010922 0 5755.9 7404.4 5128.9 8279.3 5329 5528 7215.6 5856.6 7879.2 8254.4 TRUE FALSE 6196.57613 7036.708263 5299.894966 7602.854706 5119.756684 5738.371914 6268.183053 6622.077729 8564.518574 7985.059604 0.776021274 0.881234282 0.663726413 0.952134997 0.641166997 0.718638582 0.784988887 0.829308491 1.072567895 1 12.96308746 -8.154176535 3.86796286 1.036103364 0.775163116 0.571621327 0.089235968 0.163108407 4.154692086 0.066956544 0.022472452 7.01E-09 8.154176535 -0.260940248 SES(ph)PFRETEPLVSPHQDK ddPTM_A459_MK2206_30min_R2 1 SESPFRETEPLVSPHQDK 18 1 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 S(0.136)ES(0.751)PFRET(0.113)EPLVSPHQDK 121.14 0.00051587 6592200 25384 35124 34254 40654 39628 39260 41670 33029 37857 36448 TRUE FALSE 27327.41856 33379.79324 35396.01126 37332.43815 38072.00561 40754.06681 36198.67895 37346.00371 41149.73343 35258.70474 0.775054522 0.946710705 1.003894259 1.058814793 1.07979025 1.155858308 1.026659351 1.059199536 1.167080122 1 15.10569186 -4.265539721 0.84672289 1.08571813 0.269735729 0.784995701 0.049126091 2.16516322 0.653644976 0.01700749 2.026091734 5.43E-05 4.265539721 -0.815982401 SES(ph)PIPVAEQGTLMR ddPTM_A459_MK2206_30min_R1 2 SESPIPVAEQGTLMR 15 0 P86452 P86452 ZBED6 Zinc finger BED domain-containing protein 6 1 SES(1)PIPVAEQGTLMR;S(0.007)ES(0.993)PIPVAEQGTLMR 249.36 5.57E-28 44253000 4929.5 4611.3 4818 3739 4275.3 4446.1 4744.3 4677.4 4422.1 3782.2 TRUE FALSE 4510.220139 4311.103532 4490.967584 4026.978428 4105.005748 4697.83434 4427.816403 4636.505985 4881.79312 4250.76749 1.06103666 1.014194152 1.056507465 0.947353257 0.965709312 1.105173207 1.041651046 1.090745611 1.148449811 1 12.05350763 -6.77041782 24.98757228 1.080653484 1.008469854 0.325572256 0.048982595 231.0975152 643155.8628 0.017394897 0.015561904 1.70E-07 6.77041782 -0.07218363 SES(ph)PKEPEQLR ddPTM_A459_MK2206_30min_R1 6 SESPKEPEQLR 11 1 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 S(0.065)ES(0.935)PKEPEQLR;S(0.001)ES(0.999)PKEPEQLR;SES(1)PKEPEQLR;S(0.033)ES(0.967)PKEPEQLR;S(0.002)ES(0.998)PKEPEQLR;S(0.032)ES(0.968)PKEPEQLR 190.34 9.40E-05 1702570200 28531.6 35777.8 35913.4 32715 21661.3 19360.8 25319 25897.2 33327.5 33029.7 TRUE FALSE 26104.83759 33448.65872 33475.69847 35234.71497 20798.48455 20456.99176 23630.01571 25670.78351 36792.01289 37121.6686 0.703223712 0.901054828 0.901783237 0.949168405 0.560278817 0.551079532 0.636555861 0.69153097 0.991119588 1 15.17997394 -6.245638569 24.946831 0.708543025 0.869180613 0.113047113 0.159079833 1414.811492 2233749.66 0.047725865 0.06139736 5.68E-07 6.245638569 0.160637588 SES(ph)PKEPEQLR ddPTM_A459_MK2206_30min_R2 4 SESPKEPEQLR 11 1 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 S(0.004)ES(0.996)PKEPEQLR;S(0.004)ES(0.996)PKEPEQLR;S(0.013)ES(0.987)PKEPEQLR;S(0.007)ES(0.993)PKEPEQLR 116.19 0.027806 2905956700 544263 469526 562981 448629 385220.4 289345.2 524367 415241 331942.2 514139.6 TRUE FALSE 585932.1937 446210.0216 581750.5056 411974.5756 370094.7115 300356.4343 455516.983 469514.4244 360813.9325 497363.267 1.178076936 0.897151139 1.169669222 0.828317254 0.74411348 0.603897502 0.915863742 0.944007038 0.72545352 1 18.92394043 -5.814047552 9.270116848 0.811764831 1.062940086 0.446862243 0.130910105 0.305489886 50.81067313 0.036914167 0.054984037 1.53E-06 5.814047552 0.251175255 SES(ph)PKEPEQLRK ddPTM_A459_MK2206_30min_R1 2 SESPKEPEQLRK 12 2 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 S(0.011)ES(0.989)PKEPEQLRK;S(0.059)ES(0.941)PKEPEQLRK 90.476 0.027532 456820000 14827 19023.6 19532.9 18266.8 11188.6 8911.7 12020.5 13713.8 15150.9 12580.5 TRUE FALSE 13565.88579 17785.16018 18207.06117 19673.7121 10742.93437 9416.272753 11218.63438 13593.90169 16725.89027 14139.06732 0.95946115 1.257873648 1.287713027 1.391443414 0.759805023 0.665975523 0.793449393 0.961442603 1.1829557 1 13.78739934 -6.265820113 24.99902444 0.875587608 1.231075745 0.47667199 0.168769793 333.5798502 1903598.326 0.055595044 0.065223375 5.42E-07 6.265820113 0.355488136 SES(ph)PPAELPSLR ddPTM_A459_MK2206_30min_R1 2 SESPPAELPSLR 12 0 Q14669;Q14669-2;Q14669-3;G5E9G6;H7C1L9 Q14669;H7C1L9 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.101)ES(0.899)PPAELPSLR;S(0.134)ES(0.866)PPAELPSLR 179.59 0.00010389 94569000 8512.8 9518.1 9295.3 7145.7 8517 8161.4 8607.6 7311.7 8324.8 7437.7 TRUE FALSE 7788.741658 8898.46996 8664.360934 7696.063052 8177.749855 8623.491415 8033.402709 7247.774578 9190.192751 8359.138428 0.931763689 1.064519991 1.036513632 0.920676589 0.978300566 1.03162443 0.961032381 0.867048039 1.099418658 1 13.02913854 -5.717965359 24.99881346 0.975512537 1.016291187 0.040042827 0.066309704 395.7011211 227536.5024 0.01747228 0.030262637 1.91E-06 5.717965359 0.040778651 SES(ph)PPAELPSLR ddPTM_A459_MK2206_30min_R2 3 SESPPAELPSLR 12 0 Q14669;Q14669-2;Q14669-3;G5E9G6;H7C1L9 Q14669;H7C1L9 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.136)ES(0.864)PPAELPSLR;S(0.366)ES(0.634)PPAELPSLR;S(0.008)ES(0.992)PPAELPS(0.001)LR 190.66 0.00013768 292375200 153546 155215 150639 159506 153557 134947 179101 135144 119727 164269 TRUE FALSE 165301.5998 147507.2488 155661.2291 146473.8496 147527.5806 140082.5026 155584.8236 152807.7848 130140.638 158908.916 1.040228604 0.928250299 0.979562588 0.921747208 0.928378246 0.881527017 0.979081775 0.961606112 0.818963727 1 17.27784055 -1.838324158 1.181911266 0.929378841 159.8201755 0.275703998 0.050868317 2655.488832 3.485385605 0.014261086 1144258.483 0.014510282 1.838324158 158.8907967 SES(ph)PPAELPSLRR ddPTM_A459_MK2206_30min_R1 1 SESPPAELPSLRR 13 1 Q14669;Q14669-2;Q14669-3;G5E9G6;H7C1L9 Q14669;H7C1L9 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.009)ES(0.991)PPAELPSLRR 90.476 0.010819 17806000 3581.3 3771 3863.6 3608.7 4596.8 3863.3 3392.6 4090.9 2542.2 1838.5 TRUE FALSE 3276.691629 3525.507215 3601.349597 3886.642699 4413.699722 4082.036707 3166.285844 4055.133693 2806.470787 2066.26726 1.585802424 1.706220334 1.742925355 1.880997088 2.136073976 1.975560851 1.532369943 1.962540747 1.35823223 1 11.01281116 -8.485520077 3.512570577 1.002408418 1.816948746 0.695734533 0.175838133 0.118477881 3.33808698 0.179449041 0.047408798 3.27E-09 8.485520077 0.814540328 SES(ph)PPAELPSLRR ddPTM_A459_MK2206_30min_R2 3 SESPPAELPSLRR 13 1 Q14669;Q14669-2;Q14669-3;G5E9G6;H7C1L9 Q14669;H7C1L9 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.073)ES(0.927)PPAELPSLRR;S(0.203)ES(0.797)PPAELPSLRR;S(0.023)ES(0.977)PPAELPSLRR 94.45 0.0081115 21431600 33814 61445 45348 57031 62971 62621 54547 42898 56633 44470 TRUE FALSE 36402.82584 58393.73065 46859.87969 52371.38487 60498.44214 65004.08604 47384.91338 48504.91589 61558.83597 43018.94754 0.846204473 1.357395613 1.089284661 1.217402746 1.406320833 1.511057098 1.101489369 1.127524467 1.430970293 1 15.39268461 -4.7525303 24.77880018 1.255544201 0.846203591 0.355857286 0.162385438 350.4170641 974533.3482 0.040393222 0.473447891 1.77E-05 4.7525303 -0.40934061 SES(ph)PPPLSDPK ddPTM_A459_MK2206_30min_R1 4 SESPPPLSDPK 11 0 Q15059;Q15059-2 Q15059 BRD3 Bromodomain-containing protein 3 1 SES(1)PPPLSDPK;S(0.001)ES(0.999)PPPLSDPK;SES(1)PPPLSDPK;SES(0.998)PPPLS(0.002)DPK 207.47 1.78E-05 430641400 36059.8 36029.6 35313.7 30613 31890.2 29187.9 30352.6 30449 30275.6 26498.7 TRUE FALSE 32992.72465 33684.06649 32916.70443 32970.81856 30619.94581 30840.49367 28327.83344 30182.7876 33422.85696 29781.55901 1.10782396 1.131037716 1.105271367 1.107088402 1.028151206 1.035556724 0.951187056 1.013472384 1.122266868 1 14.86213166 -6.255643692 3.281284341 1.021320685 1.115590719 0.531712275 0.040307297 0.203539208 4.591437813 0.013210878 0.016478122 5.55E-07 6.255643692 0.094270034 SES(ph)PPPLSDPK ddPTM_A459_MK2206_30min_R2 5 SESPPPLSDPK 11 0 Q15059;Q15059-2 Q15059 BRD3 Bromodomain-containing protein 3 1 S(0.008)ES(0.992)PPPLSDPK;S(0.231)ES(0.769)PPPLSDPK;SES(1)PPPLSDPK;S(0.002)ES(0.998)PPPLSDPK;S(0.019)ES(0.981)PPPLSDPK 174.9 0.00010514 354242000 361411 384277 360027 368741 354177 301260 410159 328468 289970 361577 TRUE FALSE 389080.904 365194.363 372030.1205 338613.6808 340270.2314 312724.6604 356304.6306 371399.8954 315191.0665 349778.7721 1.112362828 1.044072403 1.063615491 0.968079563 0.972815558 0.89406415 1.018657103 1.061813709 0.901115481 1 18.41608321 -5.736285208 6.289916914 0.974770935 1.071400327 0.45834134 0.049594133 0.164139028 21.04986458 0.013909624 0.023501358 1.84E-06 5.736285208 0.096629392 SES(ph)PQAEALLLPR ddPTM_A459_MK2206_30min_R2 2 SESPQAEALLLPR 13 0 A0A087WXB3;A0A087X223;A0A087WYW1;Q96NU1-4;Q96NU1-5 A0A087WXB3 SAMD11 Sterile alpha motif domain-containing protein 11 1 S(0.013)ES(0.987)PQAEALLLPR;S(0.002)ES(0.998)PQAEALLLPR 104.16 0.0079013 7431000 16687.2 18706.7 18512.5 25058.3 21245 24218 21307 19973.5 18468.7 20435.8 TRUE FALSE 17964.78486 17777.75248 19129.69751 23010.95673 20410.81455 25139.63296 18509.36531 22584.10503 20075.07414 19768.98152 0.908735983 0.899275082 0.967662269 1.163993032 1.032466672 1.271670619 0.936283201 1.142401039 1.01548348 1 14.27095093 -5.576671879 5.493535972 1.085913843 0.910178148 0.392716657 0.09035266 0.171101463 10.99931048 0.023223327 0.041455034 2.65E-06 5.576671879 -0.175735695 SES(ph)PQEALLLPR ddPTM_A459_MK2206_30min_R1 1 SESPQEALLLPR 12 0 H7BY14;A0A087WYU3;Q96NU1-6;Q96NU1;I7G285 H7BY14 SAMD11 Sterile alpha motif domain-containing protein 11 1 S(0.286)ES(0.714)PQEALLLPR 108.06 0.0082179 2116500 1272.6 1209.6 1031.9 965.97 1522.7 1604 2015.1 1203 1209.7 993.9 TRUE FALSE 1164.358687 1130.85482 961.857503 1040.369177 1462.047635 1694.817094 1880.676356 1192.482298 1335.452644 1117.031836 1.0423684 1.012374745 0.861083339 0.931369316 1.308868367 1.517250485 1.683637203 1.06754549 1.19553678 1 10.12545459 -6.274528301 8.852294255 1.329622463 0.958091371 0.408690323 0.194018944 0.210597844 124.452923 0.062764469 0.073596912 5.31E-07 6.274528301 -0.371531092 SES(ph)PQKEDGLSSQLK ddPTM_A459_MK2206_30min_R2 1 SESPQKEDGLSSQLK 15 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 S(0.009)ES(0.981)PQKEDGLS(0.005)S(0.005)QLK 160.81 0.00019938 0 14865 14736 12033 12241 13922 8431.7 14909 11860 10583 15886 TRUE FALSE 16003.07583 14004.23167 12434.17421 11240.87114 13375.35233 8752.574252 12951.43039 13410.14272 11503.49021 15367.64112 1.041348877 0.911280499 0.809114041 0.731463668 0.870358191 0.569545722 0.84277283 0.872622064 0.748552762 1 13.90760811 -4.937059862 2.023929412 0.792644174 1.071202354 0.321261664 0.106611239 0.569334922 3.320569081 0.027938771 0.264437816 1.16E-05 4.937059862 0.27855818 SES(ph)PVCSSR ddPTM_A459_MK2206_30min_R1 1 SESPVCSSR 9 0 O00472;D6RC27 O00472 ELL2 RNA polymerase II elongation factor ELL2 1 S(0.003)ES(0.997)PVCSSR 97.452 0.020579 4235700 1175.4 1219.2 1024.8 1172.5 905.8 1016.3 1098.5 1235.5 534 717.15 TRUE FALSE 1075.426058 1139.829858 955.2394313 1262.806153 869.7200679 1073.842028 1025.221069 1224.698154 589.5112109 805.9959562 1.3342822 1.414188061 1.185166531 1.566764874 1.07906257 1.332316892 1.27199282 1.519484241 0.731407157 1 9.65462879 -8.265421763 24.99994186 0.865703544 1.331975546 0.615983864 0.14907609 221.5827018 1390984.798 0.118102073 0.034881885 5.43E-09 8.265421763 0.466272001 SES(ph)PVCSSR ddPTM_A459_MK2206_30min_R2 1 SESPVCSSR 9 0 O00472;D6RC27 O00472 ELL2 RNA polymerase II elongation factor ELL2 1 SES(0.718)PVCS(0.264)S(0.018)R 98.754 0.017727 0 13306 20499 16146 21306 17317 19732 23033 12744 16230 16193 TRUE FALSE 14324.71759 19481.04947 16684.29958 19565.23165 16637.04757 20482.91509 20008.73943 14409.68456 17641.65606 15664.62374 0.914462922 1.243633412 1.065094181 1.249007443 1.062077701 1.307590622 1.277320143 0.919887052 1.126210011 1 13.9352225 -7.765011589 24.99999703 1.017286421 1.164806253 0.224170206 0.122950243 137.5114196 962336.4167 0.061749911 0.031503094 1.72E-08 7.765011589 0.147519831 SES(ph)PVPQNEK ddPTM_A459_MK2206_30min_R1 2 SESPVPQNEK 10 0 Q9UIF8-4;Q9UIF8-2;Q9UIF8-5;Q9UIF8-3;Q9UIF8 Q9UIF8-4 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B 1 SES(1)PVPQNEK;S(0.036)ES(0.964)PVPQNEK 138.42 0.0016385 17752800 9875.1 8933.3 9603.9 8414.3 9425.7 7831.7 8792 9142.2 8251.7 7587.2 TRUE FALSE 9035.170889 8351.740546 8952.014026 9062.370844 9050.25441 8275.124086 8205.501722 9062.270709 9109.493744 8527.159616 1.059575673 0.979428194 1.049823673 1.062765475 1.061344553 0.970443202 0.962278425 1.062753732 1.068291688 1 13.05784955 -6.720762565 24.99923661 1.01352053 1.040601648 0.126586317 0.038983034 406.4363451 249786.7879 0.014000242 0.014000095 1.90E-07 6.720762565 0.027081118 SES(ph)PVPQNEK ddPTM_A459_MK2206_30min_R2 1 SESPVPQNEK 10 0 Q9UIF8-4;Q9UIF8-2;Q9UIF8-5;Q9UIF8-3;Q9UIF8 Q9UIF8-4 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B 1 S(0.018)ES(0.982)PVPQNEK 129.34 0.0029645 9923600 63412 72533 58136 82198 64422 52281 67444 53032 58088 62767 TRUE FALSE 68266.87148 68931.11669 60074.22522 75482.16046 61892.46859 54270.59009 58588.52179 59963.46449 63140.38924 60718.91793 1.124309751 1.135249425 0.989382342 1.243140738 1.019327595 0.89380035 0.964913799 0.987558187 1.039880014 1 15.88985846 -6.509699362 24.79553904 0.973558714 1.116459189 0.516970109 0.066589201 457.7832411 861269.7261 0.020676448 0.022405204 3.09E-07 6.509699362 0.142900475 SES(ph)SQGGAAGGPEAGAR ddPTM_A459_MK2206_30min_R1 1 SESSQGGAAGGPEAGAR 17 0 Q6ZN16 Q6ZN16 MAP3K15 Mitogen-activated protein kinase kinase kinase 15 1 S(0.016)ES(0.968)S(0.016)QGGAAGGPEAGAR 184.32 5.54E-14 0 310.17 335.38 321.08 283.97 511.23 258.41 258.91 448.31 161.09 209.52 TRUE FALSE 283.7884127 313.546701 299.2859842 305.8414186 490.8666266 273.0409509 241.6385863 444.3904729 177.835882 235.4769194 1.205164453 1.331538997 1.270978001 1.298816969 2.08456365 1.159523199 1.026166755 1.887193335 0.755215766 1 7.879441849 -8.291793311 24.94718721 0.877607668 1.398780859 0.309377795 0.316737323 962.2571791 790847.9074 0.301683628 0.077933711 5.11E-09 8.291793311 0.521173192 SES(ph)TENQSYAK ddPTM_A459_MK2206_30min_R2 2 SESTENQSYAK 11 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 SES(0.967)T(0.033)ENQSYAK;S(0.047)ES(0.905)T(0.047)ENQS(0.001)YAK 138.2 0.0037254 2469000 21437 20419 20234.1 20987.7 14518.1 14467.2 25946 18083.9 22727 21831.5 TRUE FALSE 23078.2332 19405.02215 20908.6948 19272.93777 13948.04645 15017.75943 22539.25903 20447.52782 24703.75338 21119.13994 1.092763875 0.918835815 0.990035335 0.912581565 0.660445761 0.711097113 1.067243226 0.968198889 1.169732927 1 14.36626346 -7.309388868 24.97580129 1.048643769 0.879053374 0.30237143 0.126704657 572.7070277 298307.9736 0.057916019 0.039047078 4.90E-08 7.309388868 -0.169590395 SES(ph)VVYADIR ddPTM_A459_MK2206_30min_R2 2 SESVVYADIR 10 0 O95297-4;O95297-2;O95297;O95297-5 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 S(0.004)ES(0.996)VVYADIR;S(0.297)ES(0.703)VVYADIR 124.6 0.0037912 4082300 31468 28761 29489 32968 26324 36262 35710 23892 39556 36769 TRUE FALSE 33877.21427 27332.77056 30472.14854 30274.40894 25290.38749 37641.97582 31021.2341 27014.76643 42996.50938 35569.23054 0.952430338 0.768438624 0.856699683 0.851140395 0.711018684 1.058273548 0.872136778 0.759498196 1.208811906 1 15.11834214 -8.260005015 24.9997824 1.104405959 0.853553881 0.477007133 0.105003018 102.9296213 1794062.621 0.077621291 0.025719472 5.50E-09 8.260005015 -0.250852079 SES(ph)WER ddPTM_A459_MK2206_30min_R2 1 SESWER 6 0 O43598;H0Y8X4;O43598-2 O43598 DNPH1 2-deoxynucleoside 5-phosphate N-hydrolase 1 1 SES(1)WER 95.815 0.038275 30817000 72436 97591 84160 85925 96479 91695 72964 58559 81661 81837 TRUE FALSE 77981.75585 92744.77285 86965.8524 78904.65264 92690.74969 95184.51748 63383.73915 66212.86236 88763.72617 79166.66539 0.985032721 1.171512939 1.098516048 0.996690365 1.170830541 1.202330766 0.800636718 0.836373012 1.121226033 1 16.27260546 -7.255953098 24.99882086 0.925923358 1.105104091 0.365138779 0.105708899 476.1575678 2169668.749 0.041394783 0.0311032 5.55E-08 7.255953098 0.179180733 SESADQTVS(ph)PPTPFAR ddPTM_A459_MK2206_30min_R1 2 SESADQTVSPPTPFAR 16 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 SESADQT(0.001)VS(0.989)PPT(0.009)PFAR;SESADQT(0.314)VS(0.61)PPT(0.075)PFAR 172.56 6.08E-06 7641900 4037.9 3869.2 4104.8 3340.19 4235 3717.04 3935.5 3767.6 3415.3 2769.28 TRUE FALSE 3694.455401 3617.314377 3826.177613 3597.452013 4066.310982 3927.495593 3672.969976 3734.66027 3770.332657 3112.359313 1.187027277 1.162241892 1.229349579 1.155860121 1.30650435 1.261903012 1.180124017 1.199945088 1.211406614 1 11.60379291 -10.38023922 5.985996714 0.999999971 1.211147468 0.675890088 0.043724846 1.86E-08 3.52E-09 0.044193535 0.010718505 4.17E-11 10.38023922 0.211147497 SESADQTVS(ph)PPTPFAR ddPTM_A459_MK2206_30min_R2 2 SESADQTVSPPTPFAR 16 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 SESADQT(0.099)VS(0.889)PPT(0.012)PFAR;SESADQT(0.123)VS(0.877)PPTPFAR 151.44 0.00020103 7403600 27255 30331 29306 43258 35522 40248 38116 28849 36876 37647 TRUE FALSE 29341.66376 28824.80665 30283.04741 39723.68302 34127.2278 41779.66584 33111.32341 32619.66335 40083.40782 36418.58147 0.805678381 0.791486255 0.831527374 1.090753165 0.937082841 1.147207391 0.90918762 0.895687367 1.100630673 1 15.15238711 -5.658704062 6.403731386 1.005058691 0.802546323 0.577103333 0.079288358 0.151606012 8.180322118 0.021345373 0.037206443 2.19E-06 5.658704062 -0.202512369 SESAPTLHPYS(ph)PLSPK ddPTM_A459_MK2206_30min_R2 1 SESAPTLHPYSPLSPK 16 0 Q8WUF5;K7EN03 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 S(0.001)ES(0.001)APT(0.006)LHPY(0.231)S(0.541)PLS(0.22)PK 64.249 0.038926 3822300 23545 26466 28574 30255 31319 30992 27535 23273 25246 22991 TRUE FALSE 25347.6233 25151.73693 29526.6429 27783.06972 30089.25869 32171.42228 23919.62142 26314.86101 27441.85145 22240.80555 1.139689983 1.130882461 1.327588735 1.249193499 1.352885291 1.446504363 1.075483591 1.183179312 1.233851507 1 14.44092142 -9.054723751 0.720579263 0.998469954 1.255250029 0.313462326 0.106833462 2.361523922 1.977821534 0.131126488 0.04190943 8.82E-10 9.054723751 0.256780075 SESAPTLHPYSPLS(ph)PK ddPTM_A459_MK2206_30min_R1 3 SESAPTLHPYSPLSPK 16 0 Q8WUF5;K7EN03 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 SESAPTLHPYS(0.096)PLS(0.904)PK;SESAPTLHPY(0.001)S(0.011)PLS(0.989)PK;SESAPTLHPYS(0.03)PLS(0.97)PK 160.81 5.14E-05 47650400 10776.2 9826.3 10135.5 7857.8 7351.68 5986.5 7090.6 6331.2 7083.1 6808.6 TRUE FALSE 9859.627602 9186.606084 9447.530499 8463.009118 7058.847018 6325.450457 6617.599012 6275.846986 7819.413592 7652.10077 1.288486378 1.200533861 1.234632264 1.10597199 0.92247178 0.826629268 0.864808137 0.820146934 1.021864953 1 12.90164016 -6.096564504 2.236091575 0.890176563 1.239628549 0.83840563 0.065898703 0.110473353 1.089174313 0.020895171 0.030155346 8.01E-07 6.096564504 0.349451986 SESAPTLHPYSPLS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SESAPTLHPYSPLSPK 16 0 Q8WUF5;K7EN03 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 SESAPTLHPYS(0.001)PLS(0.999)PK;SESAPTLHPYS(0.029)PLS(0.971)PK 213.02 2.44E-08 40045500 294204 336295 317674 276702 265750 212691 279780 213348 198338 275590 TRUE FALSE 316728.4844 319595.0793 328265.0926 254094.5615 255315.3197 220785.105 243044.5499 241233.3161 215589.0807 266597.5209 1.188039872 1.19879239 1.231313373 0.953101742 0.957680772 0.828158883 0.911653451 0.904859563 0.808668738 1 18.02430384 -5.838291772 3.991156869 0.898403836 1.206885778 0.865142192 0.05388854 0.070980773 2.179190805 0.015341071 0.024199298 1.45E-06 5.838291772 0.308481943 SESDLEDVGPTAEWNGDGS(ph)GSLRR ddPTM_A459_MK2206_30min_R2 1 SESDLEDVGPTAEWNGDGSGSLRR 24 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 SESDLEDVGPTAEWNGDGS(0.5)GS(0.5)LRR 84.89 5.77E-05 5008800 12111 16548 13535 15507 12038 15126 14618 11327 13605 12600 TRUE FALSE 13038.22747 15726.25038 13986.25014 14240.0285 11565.32763 15701.63053 12698.63904 12807.47779 14788.33831 12188.86303 1.069683648 1.29021471 1.147461425 1.168281936 0.948843842 1.288194845 1.041823098 1.050752458 1.213266428 1 13.57327594 -14.52287872 0.083325603 0.590260494 1.253213345 0.120661241 0.105320621 486.6133171 2.843021095 36.8071031 3.104483525 3.00E-15 14.52287872 0.662952851 SESDLEDVGPTAEWNGDGSGS(ph)LRR ddPTM_A459_MK2206_30min_R1 2 SESDLEDVGPTAEWNGDGSGSLRR 24 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 SESDLEDVGPT(0.003)AEWNGDGS(0.294)GS(0.703)LRR;SESDLEDVGPTAEWNGDGS(0.004)GS(0.996)LRR 153.31 2.10E-10 5886100 3591.6 2619 2918.6 2194.79 3633.2 3126.6 3311.9 2516.4 2101.06 1932.87 TRUE FALSE 3286.11556 2448.502624 2720.493564 2363.833106 3488.481951 3303.62539 3090.969194 2494.39938 2319.472706 2172.328528 1.512715741 1.127132748 1.252339841 1.088156361 1.605872181 1.520776138 1.422882936 1.148260656 1.067735693 1 11.08502659 -10.03042012 7.5652156 1.000000002 1.305971684 0.190299868 0.188792219 0 0 0.19338794 0.046903465 9.32E-11 10.03042012 0.305971683 SESDLEDVGPTAEWNGDGSGS(ph)LRR ddPTM_A459_MK2206_30min_R2 1 SESDLEDVGPTAEWNGDGSGSLRR 24 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 SESDLEDVGPTAEWNGDGS(0.282)GS(0.718)LRR 65.744 0.0014101 5342500 13140 16085 10287 14047 15371 14735 13418 11258 14027 12669 TRUE FALSE 14146.0085 15286.24229 10629.96345 12899.31517 14767.45731 15295.75075 11656.20048 12729.45925 15247.0431 12255.61157 1.154247458 1.247285148 0.867354794 1.052523172 1.204954745 1.248060994 0.951090887 1.038663732 1.24408668 1 13.58115486 -11.46526559 2.752707604 0.92582458 1.106904009 0.064809266 0.126325832 99846636.01 21762439 47131970.32 0.032442139 3.43E-12 11.46526559 0.181079428 SESDLSQPES(ph)DEEGYALSGR ddPTM_A459_MK2206_30min_R1 1 SESDLSQPESDEEGYALSGR 20 0 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 SESDLS(0.001)QPES(0.999)DEEGYALSGR 225.69 9.43E-21 7289300 591.42 754.9 582.71 505.08 583.59 622.99 700.19 790.14 598.86 603.91 TRUE FALSE 541.1166233 705.7558728 543.1572687 543.9813491 560.3443745 658.2631554 653.4816027 783.2318893 661.11364 678.7269301 0.797252325 1.039823 0.800258903 0.801473059 0.825581467 0.969849768 0.962804883 1.153972024 0.974049519 1 9.406687446 -7.101006281 2.084293626 1.041811564 0.858792472 0.477402572 0.08354006 0.285856234 2.449585131 0.038489786 0.027919557 7.92E-08 7.101006281 -0.183019092 SESDLSQPES(ph)DEEGYALSGR ddPTM_A459_MK2206_30min_R2 3 SESDLSQPESDEEGYALSGR 20 0 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 SESDLSQPES(1)DEEGYALSGR;SESDLSQPES(1)DEEGYALSGR;SESDLSQPES(1)DEEGYALSGR 200.73 5.27E-17 12582500 55552.1 70342.9 60618.7 69713.6 72898.6 82988.9 63645.9 56287.4 71557 67612.3 TRUE FALSE 59805.21149 66849.77387 62639.6972 64017.77588 70036.23468 86147.10074 55289.11688 63644.35644 77780.89851 65406.11619 0.914367264 1.022072212 0.957703971 0.97877354 1.070790299 1.317110781 0.845320287 0.973064297 1.189199161 1 15.99713793 -6.243755641 7.205803697 1.066151311 0.971036 0.135502773 0.120826741 0.411735532 111.9039606 0.037300412 0.046751514 5.70E-07 6.243755641 -0.09511531 SESELIDELS(ph)EDFDRSECK ddPTM_A459_MK2206_30min_R1 3 SESELIDELSEDFDRSECK 19 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7EVY3;E7ES10;E9PDE4;H0Y9H6;A0A0A0MR45;H0Y7F0;E7EQA0;H0YD33;E7EQ12;D6RC54;P20810-5;E9PCH5;P20810-2;P20810-3 P20810-6;P20810-5 CAST Calpastatin 1 SESELIDELS(1)EDFDRSECK;SESELIDELS(0.991)EDFDRS(0.009)ECK;SESELIDELS(1)EDFDRSECK 132.76 0.00013225 26751000 4765.5 5219.5 5356.1 4439.15 4580.7 3494.66 4711.9 5216.9 3782.3 3729.23 TRUE FALSE 4360.1692 4879.709601 4992.542855 4781.054102 4398.241019 3692.524629 4397.577748 5171.289193 4175.48362 4191.235167 1.040306503 1.164265284 1.191186525 1.140726758 1.049390178 0.881011082 1.049231927 1.233834177 0.996241789 1 12.03315976 -6.277203815 6.344470071 1.039340191 1.14056271 0.226843508 0.08923743 0.274332346 49.83758727 0.029396911 0.034725982 5.28E-07 6.277203815 0.10122252 SESELIDELS(ph)EDFDRSECK ddPTM_A459_MK2206_30min_R2 1 SESELIDELSEDFDRSECK 19 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7EVY3;E7ES10;E9PDE4;H0Y9H6;A0A0A0MR45;H0Y7F0;E7EQA0;H0YD33;E7EQ12;D6RC54;P20810-5;E9PCH5;P20810-2;P20810-3 P20810-6;P20810-5 CAST Calpastatin 1 SESELIDELS(0.999)EDFDRSECK 74.444 0.0054327 1307200 2916.3 3271.7 2997.8 3080.4 2147.5 2739.8 3193.8 2877.2 2688.6 3299.3 TRUE FALSE 3139.57417 3109.232135 3097.745156 2828.721466 2063.17836 2844.065009 2774.450224 3253.259919 2922.449568 3191.644111 0.983685543 0.974178833 0.970579754 0.886289752 0.646431208 0.891097162 0.869285587 1.01930535 0.915656466 1 11.64008408 -10.28157557 13.80099332 0.999996044 0.903724955 0.074712057 0.098578794 0 0 0.104028133 0.025230528 5.23E-11 10.28157557 -0.096271089 SESELIDELSEDFDR ddPTM_A459_MK2206_30min_R1 4 SESELIDELSEDFDR 15 0 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7EVY3;E7ES10;E9PDE4;H0Y9H6;A0A0A0MR45;H0Y7F0;E7EQA0;H0YD33;E7EQ12;D6RC54;P20810-5;E9PCH5;P20810-2;P20810-3 P20810-6;P20810-5 CAST Calpastatin 0 ;;; 378.97 6.38E-238 10674200 2212.17 2115.97 1920.47 1515.04 2054.95 1576.02 2420.87 1643.01 1929.15 2259.41 FALSE TRUE 2024.013325 1978.219968 1790.113847 1631.728643 1973.09699 1665.25289 2259.378179 1628.645337 2129.692046 2539.322768 0.797068159 0.779034471 0.704957191 0.642584182 0.777017012 0.655786224 0.889756201 0.641369958 0.838685051 1 11.31022807 -8.547973709 8.009346316 0.999997631 0.737162791 0.544027695 0.074831665 0.28587626 89.21640605 0.068601308 0.017732204 2.83E-09 8.547973709 -0.26283484 SESELIDELSEDFDR ddPTM_A459_MK2206_30min_R2 4 SESELIDELSEDFDR 15 0 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7EVY3;E7ES10;E9PDE4;H0Y9H6;A0A0A0MR45;H0Y7F0;E7EQA0;H0YD33;E7EQ12;D6RC54;P20810-5;E9PCH5;P20810-2;P20810-3 P20810-6;P20810-5 CAST Calpastatin 0 ;;; 281.25 4.19E-54 6303350 13979 14898.7 12480.9 17688.1 14665.7 15361.2 15386.6 16680.7 9678.67 15262.5 FALSE TRUE 15049.24299 14158.85222 12897.00698 16242.92565 14089.85093 15945.78123 13366.32094 18860.92476 10520.50322 14764.48587 1.019286626 0.958980376 0.873515481 1.100134863 0.954306912 1.080009244 0.905302159 1.277452186 0.712554661 1 13.8498435 -5.75604162 24.99993704 1.012764605 0.951432817 0.02717538 0.140784084 510.3223687 2363544.181 0.035579724 0.05941412 1.75E-06 5.75604162 -0.061331788 SESELIDELSEDFDRSECK ddPTM_A459_MK2206_30min_R1 1 SESELIDELSEDFDRSECK 19 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7EVY3;E7ES10;E9PDE4;H0Y9H6;A0A0A0MR45;H0Y7F0;E7EQA0;H0YD33;E7EQ12;D6RC54;P20810-5;E9PCH5;P20810-2;P20810-3 P20810-6;P20810-5 CAST Calpastatin 0 197.51 8.01E-15 4720000 722.89 885.22 970.94 1006.2 957.94 692.42 739.52 1013.6 592.59 704.83 FALSE TRUE 661.4044095 827.5920171 905.035298 1083.697698 919.7832213 731.624222 690.1879701 1004.738202 654.1918511 792.1496616 0.8349488 1.044741994 1.14250544 1.368046659 1.161123038 0.923593429 0.871284813 1.268369162 0.825843755 1 9.629629216 -6.754658811 24.97986424 0.987932963 1.122744003 0.134580497 0.165455925 351.3046039 1294216.95 0.057712223 0.056474912 1.76E-07 6.754658811 0.13481104 SESGGLGVSMVEYVLSS(ph)SPGDSCLRK ddPTM_A459_MK2206_30min_R1 1 SESGGLGVSMVEYVLSSSPGDSCLRK 26 1 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 1 SESGGLGVSMVEYVLS(0.009)S(0.551)S(0.403)PGDS(0.037)CLRK 98.151 1.50E-06 9279200 1081.2 869.58 766.26 831.92 935.75 933.89 772.72 786.94 639.63 619.96 TRUE FALSE 989.2382624 812.9701839 714.2484061 895.9946225 898.477096 986.7660447 721.1732587 780.0598665 706.1218274 696.7653253 1.419758169 1.166777614 1.025091778 1.285934575 1.28949743 1.416210034 1.03503035 1.119544613 1.013428484 1 9.444529019 -7.293825643 24.52636064 1.051962847 1.253505026 0.489832853 0.111889888 549.4619672 416109.2043 0.049724549 0.033527548 5.08E-08 7.293825643 0.201542179 SESLIDASEDS(ph)QLEAAIR ddPTM_A459_MK2206_30min_R1 4 SESLIDASEDSQLEAAIR 18 0 C9JAT7;O94888 C9JAT7 UBXN7 UBX domain-containing protein 7 1 SESLIDASEDS(1)QLEAAIR;SESLIDAS(0.002)EDS(0.998)QLEAAIR;SESLIDASEDS(1)QLEAAIR;SESLIDASEDS(1)QLEAAIR 319.33 5.85E-127 37810900 7211.89 7411.69 7841.25 6910.49 7659.7 5967.99 6866.36 6380.62 5986.37 4583.25 TRUE FALSE 6598.480884 6929.187634 7309.007797 7442.737137 7354.597929 6305.892436 6408.317653 6324.834912 6608.674584 5151.057612 1.280995357 1.345197075 1.418933421 1.444894951 1.427784056 1.224193731 1.244078039 1.227871126 1.28297431 1 12.33065296 -6.773584647 22.11048616 1.21308104 1.386802175 0.550794499 0.084026438 46.20835844 84120.62645 0.029012175 0.025839941 1.68E-07 6.773584647 0.173721135 SESLIDASEDS(ph)QLEAAIR ddPTM_A459_MK2206_30min_R2 4 SESLIDASEDSQLEAAIR 18 0 C9JAT7;O94888 C9JAT7 UBXN7 UBX domain-containing protein 7 1 SESLIDASEDS(1)QLEAAIR;SESLIDAS(0.029)EDS(0.971)QLEAAIR;SESLIDASEDS(1)QLEAAIR;SESLIDASEDS(1)QLEAAIR 175.56 2.46E-09 5942100 21999.9 33178.6 26474.3 30498.1 29287.7 34166.9 28211.3 21961.23 23470.5 20430.9 TRUE FALSE 23684.22926 31530.99897 27356.93995 28006.30767 28137.71774 35467.14532 24507.12242 24831.63817 25511.92167 19764.24141 1.19833738 1.595355892 1.384163418 1.417019105 1.423667985 1.794510834 1.239972834 1.256392171 1.290812085 1 14.27060496 -8.366348833 0.947422021 1.019641636 1.456472433 0.407915823 0.16099101 0.527587424 1.02835158 0.151424971 0.05272837 4.30E-09 8.366348833 0.436830797 SESLS(ph)NCSIGKK ddPTM_A459_MK2206_30min_R1 1 SESLSNCSIGKK 12 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.011)ES(0.223)LS(0.766)NCSIGKK 167.22 0.00078694 7216500 4107.7 4704.5 4392 3854.9 4541.7 3266.6 3711.9 4331.9 2635.7 2301.5 TRUE FALSE 3758.318545 4398.236195 4093.883277 4151.805066 4360.794472 3451.552069 3464.285924 4294.026655 2909.690447 2586.627195 1.452980372 1.700374991 1.582710985 1.605103771 1.685899877 1.334383275 1.339306232 1.660087183 1.124897493 1 11.33685642 -8.530236599 0.490742286 0.9730081 1.609960625 0.623751322 0.142267466 0.729571493 0.432546777 0.171544507 0.082470056 2.95E-09 8.530236599 0.636952526 SESQESLVT(ph)SPSKPK ddPTM_A459_MK2206_30min_R1 1 SESQESLVTSPSKPK 15 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 SESQESLVT(0.708)S(0.292)PSKPK 150.12 0.0028181 9674700 3005.9 3458.3 3628.3 3242.5 2224.2 2075.1 2727.9 2814.7 3371.2 3854.4 TRUE FALSE 2750.23242 3233.164041 3382.021105 3492.237912 2135.605404 2192.590369 2545.926768 2790.091375 3721.648304 4331.912171 0.634877235 0.746359555 0.780722455 0.806165447 0.492993699 0.506148389 0.587714309 0.644078473 0.859123675 1 12.08078828 -8.443003871 2.920690754 0.997109561 0.650184084 0.571058815 0.100469098 0.198440023 3.455180892 0.110463124 0.029702471 3.61E-09 8.443003871 -0.346925477 SESQESLVT(ph)SPSKPK ddPTM_A459_MK2206_30min_R2 1 SESQESLVTSPSKPK 15 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 SESQESLVT(0.62)S(0.38)PSKPK 102.57 0.0085955 48521000 178500 142300 183550 142580 159040 72650 168890 144030 135210 218600 TRUE FALSE 192166.0972 135233.5889 189669.4654 130930.7579 152795.2905 75414.74666 146714.5401 162855.2155 146970.3214 211467.0999 0.908728106 0.63950179 0.896921864 0.61915427 0.722548758 0.356626382 0.693793693 0.770120816 0.695003249 1 17.6900737 -9.309290729 1.224986857 1.000459999 0.690709818 0.270283754 0.147164391 8.504303254 11.953318 0.152653526 0.043154296 4.91E-10 9.309290729 -0.309750181 SESQESLVTS(ph)PSKPK ddPTM_A459_MK2206_30min_R1 1 SESQESLVTSPSKPK 15 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 SESQESLVT(0.446)S(0.553)PS(0.002)KPK 195.6 3.74E-20 0 2052.3 2366.4 2313.6 2080.4 1570.5 1539.8 1932 1912.8 2431.7 2171.5 TRUE FALSE 1877.741108 2212.34693 2156.559278 2240.632768 1507.943659 1626.982145 1803.119805 1896.076591 2684.483917 2440.521814 0.769401485 0.906505698 0.883646795 0.918095776 0.617877558 0.666653392 0.738825523 0.776914421 1.09996309 1 11.25297393 -8.255901514 24.74625299 1.049981559 0.785512215 0.551369023 0.095700815 301.0745953 1345385.51 0.077291608 0.027368612 5.55E-09 8.255901514 -0.264469345 SESQESLVTS(ph)PSKPK ddPTM_A459_MK2206_30min_R2 1 SESQESLVTSPSKPK 15 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 SESQESLVT(0.16)S(0.785)PS(0.054)KPK 70.334 0.028607 17976000 34920 29637 37428 30890 33582 20111 37021 23157 22201 40275 TRUE FALSE 37593.50205 28165.26968 38675.83084 28366.18819 32263.40194 20876.3382 32160.09823 26183.69941 24132.00285 38960.83005 0.96490506 0.722912465 0.992684981 0.728069401 0.828098424 0.535828887 0.825446947 0.672051888 0.619391394 1 15.24973679 -5.799431536 24.04917739 0.728670108 0.876441962 0.189018304 0.137882809 164.1252877 103891.0389 0.036550381 0.054214775 1.59E-06 5.799431536 0.147771854 SESS(ph)DFEVVPK ddPTM_A459_MK2206_30min_R2 1 SESSDFEVVPK 11 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.007)ES(0.059)S(0.933)DFEVVPK 193.28 2.03E-05 3421900 40270 37357 40073 34055 45017 31116 38249 24042 31016 41911 TRUE FALSE 43353.10216 35501.9057 41409.01382 31272.59756 43249.40639 32300.14118 33226.86035 27184.37195 33713.71562 40543.4475 1.069299846 0.875650885 1.021349105 0.771335431 1.0667422 0.79667969 0.819537124 0.670499763 0.831545359 1 15.30718115 -6.796397295 24.9799613 0.802801282 0.948970461 0.256569125 0.11316042 225.7055778 161281.4438 0.037568124 0.033133305 1.60E-07 6.796397295 0.146169179 SESSTSAFST(ph)PTR ddPTM_A459_MK2206_30min_R1 2 SESSTSAFSTPTR 13 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 SESSTSAFS(0.002)T(0.998)PTR;SESSTSAFS(0.013)T(0.986)PTR 215.72 6.31E-07 22452000 8062.2 7369.3 6462.6 5425 8545.6 8728.9 8636 6976 6750.4 6465.6 TRUE FALSE 7376.467554 6889.557231 6023.936718 5842.83444 8205.210656 9223.122775 8059.908197 6915.009567 7452.128237 7266.607341 1.015118501 0.948111947 0.828988885 0.80406635 1.129166648 1.269247441 1.109170734 0.95161459 1.025530607 1 12.82706624 -6.271416306 24.98960985 1.089211147 0.897568419 0.452993404 0.097556661 685.9975596 1718242.419 0.033723878 0.038689372 5.35E-07 6.271416306 -0.191642728 SESSTSAFST(ph)PTR ddPTM_A459_MK2206_30min_R2 1 SESSTSAFSTPTR 13 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 SESSTSAFS(0.002)T(0.998)PTR 183.06 0.00027943 14500000 39289 60663 50132 54746 50371 62212 62630 44888 52944 58456 TRUE FALSE 42296.99605 57650.56363 51803.37586 50273.07668 48393.18145 64579.52125 54406.60577 50755.01572 57548.97342 56548.58551 0.747976199 1.01948728 0.916086148 0.889024477 0.855780583 1.142018331 0.962121427 0.897547043 1.017690768 1 15.78720332 SEST(ph)ENQSYAK ddPTM_A459_MK2206_30min_R2 1 SESTENQSYAK 11 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 S(0.029)ES(0.244)T(0.727)ENQSYAK 161.25 0.0002709 0 22136 24411 18302 18906 18073 15085 21331 15353 27056 18689 TRUE FALSE 23830.74918 23198.78524 18912.17955 17361.31932 17363.36321 15659.07025 18530.21408 17359.68981 29409.28197 18079.17946 1.318132232 1.283176888 1.046075105 0.960293544 0.960406596 0.866138327 1.024947737 0.960203413 1.626693404 1 14.14204158 -5.246158035 4.828273111 1.038707815 1.307056064 0.19232377 0.198959536 0.282116343 19.07757286 0.051789892 0.133802636 5.67E-06 5.246158035 0.268348249 SESTDSLGGLS(ph)PSEVTAIQCK ddPTM_A459_MK2206_30min_R1 1 SESTDSLGGLSPSEVTAIQCK 21 0 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 S(0.001)ES(0.001)T(0.001)DS(0.003)LGGLS(0.982)PS(0.011)EVT(0.001)AIQCK 75.896 0.0019374 3558800 1688.6 1420.9 1897 1342.4 1584.1 1173.9 1352.5 1325.8 1514.1 1297.3 TRUE FALSE 1544.975703 1328.399152 1768.236925 1445.791881 1521.001943 1240.365204 1262.277193 1314.20867 1671.496113 1458.019318 1.059640077 0.911098457 1.212766459 0.991613666 1.043197387 0.85071932 0.865747921 0.901365746 1.146415615 1 10.50979412 -6.709341993 23.49878558 0.941241212 1.042801943 0.153256026 0.104962042 99.68365033 44961.82811 0.034725429 0.034725363 1.95E-07 6.709341993 0.101560732 SESVEGFLS(ph)PSR ddPTM_A459_MK2206_30min_R1 2 SESVEGFLSPSR 12 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 SESVEGFLS(0.996)PS(0.004)R;SESVEGFLS(0.982)PS(0.018)R 141.73 0.00096777 63663000 3388.1 2809.3 2801.9 2485 3428.6 2907.1 3406.3 2721.7 2512.2 2170.52 TRUE FALSE 3099.924303 2626.414059 2611.714835 2676.395131 3292.031602 3071.69749 3179.071942 2697.904464 2773.35218 2439.420404 1.270762636 1.076654952 1.070629249 1.097143865 1.349513842 1.259191521 1.3032079 1.10596126 1.136889802 1 11.2523227 -8.578969733 1.575838232 1.003478029 1.194169239 0.277870856 0.095380443 0.68515827 3.737042313 0.100009555 0.029086946 2.64E-09 8.578969733 0.190691211 SESVEGFLS(ph)PSR ddPTM_A459_MK2206_30min_R2 4 SESVEGFLSPSR 12 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 SESVEGFLS(0.995)PS(0.005)R;SESVEGFLS(0.989)PS(0.011)R;SESVEGFLS(0.996)PS(0.004)R;S(0.001)ESVEGFLS(0.994)PS(0.005)R 131.08 0.0020759 53610000 45644.6 46952.6 40423.9 44677.9 44924.5 48944.2 48255.5 33370 37935.1 44762.8 TRUE FALSE 49139.18567 44621.00216 41771.61265 41027.57265 43160.5384 50806.80583 41919.49488 37731.57358 41234.62643 43302.1935 1.134796686 1.030455932 0.964653503 0.947471002 0.996728685 1.173307902 0.968068624 0.871354787 0.952252602 1 15.40215249 -7.512759871 24.92988297 0.931024543 1.034288616 0.286074014 0.072117087 626.8724044 1544437.15 0.033520875 0.020892113 3.07E-08 7.512759871 0.103264074 SESVVSGLDS(ph)PAK ddPTM_A459_MK2206_30min_R2 2 SESVVSGLDSPAK 13 0 H7BYJ3;O14578;O14578-4;O14578-2 H7BYJ3 CIT Citron Rho-interacting kinase 1 SESVVS(0.001)GLDS(0.999)PAK;SESVVS(0.001)GLDS(0.999)PAK 141.34 0.00083373 23795000 163953 152207 157634 153028 148988 124280 189454 139629 119370 183881 TRUE FALSE 176505.3677 144648.6217 162889.4389 140525.1229 143137.9825 129009.5625 164578.4622 157878.9897 129752.5868 177880.978 0.992266681 0.813176447 0.915721516 0.789995223 0.804684031 0.725257776 0.92521676 0.887554091 0.729434863 1 17.44055272 -4.755735194 24.92177721 0.838173482 0.992266939 0.217380551 0.084177245 265.4112439 1159467.405 0.020058393 0.172912025 1.75E-05 4.755735194 0.154093457 SESVVY(ph)ADIR ddPTM_A459_MK2206_30min_R1 1 SESVVYADIR 10 0 O95297-4;O95297-2;O95297;O95297-5 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 SESVVY(1)ADIR 191.17 0.0024939 9576300 3140.3 2895.8 2199.3 2607.6 3146.8 2589.4 3102.1 2606.3 2851.8 2882.9 TRUE FALSE 2873.200995 2707.282894 2050.017644 2808.437804 3021.456293 2736.00959 2895.164569 2583.513394 3148.254815 3240.055417 0.886775263 0.835566849 0.632710673 0.866786966 0.932532288 0.844432961 0.893554028 0.797367039 0.971666966 1 11.66180277 -8.506162448 0.322823508 1.022003613 0.797022408 0.322910766 0.08031371 2.388133311 0.729868707 0.191160218 0.109395845 3.12E-09 8.506162448 -0.224981205 SET(ph)PPHWR ddPTM_A459_MK2206_30min_R1 2 SETPPHWR 8 0 Q13427;E9PG73;C9JM79 Q13427 PPIG Peptidyl-prolyl cis-trans isomerase G 1 SET(1)PPHWR;SET(1)PPHWR 123.75 0.0078078 11072700 8477.7 8766.4 9327.6 7842 7979.8 7877.3 8490 7855.9 7487.3 8182.5 TRUE FALSE 7756.627097 8195.705767 8694.4685 8445.992199 7661.947668 8323.305919 7923.647591 7787.216695 8265.631629 9196.209875 0.843459121 0.891204733 0.945440417 0.918420992 0.833163637 0.905080031 0.861621005 0.846785448 0.898808503 1 13.16682368 -8.560097472 21.21055095 1.000000001 0.88237659 0.52392853 0.03391701 1894.599851 1079711.07 0.034416773 0.008886373 2.75E-09 8.560097472 -0.117623411 SET(ph)SPVAPR ddPTM_A459_MK2206_30min_R1 1 SETSPVAPR 9 0 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8T6;H0Y8H7 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 SET(0.642)S(0.358)PVAPR 128.86 0.0098759 27702000 3639.8 3108.7 3319.2 3226.7 3968.4 3565.4 4161.4 3439.8 3309.4 3200.7 TRUE FALSE 3330.215897 2906.323065 3093.901952 3475.220993 3810.330225 3767.269867 3883.800599 3409.726191 3653.423973 3597.22688 0.925773105 0.807934323 0.860079738 0.966083349 1.059241008 1.047270576 1.079665178 0.947876324 1.015622338 1 11.81266944 -5.895630667 3.323922979 1.025696685 0.858073894 0.732739663 0.043173221 0.120772948 2.63396576 0.012981547 0.020380254 1.27E-06 5.895630667 -0.167622791 SET(ph)SPVAPR ddPTM_A459_MK2206_30min_R2 1 SETSPVAPR 9 0 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8T6;H0Y8H7 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 SET(0.503)S(0.497)PVAPR 137.05 0.0060506 56100000 156480 206020 172360 253470 227140 227190 263340 180200 203110 221710 TRUE FALSE 168460.2291 195789.3464 178106.3964 232760.6902 218221.3423 235835.8746 228763.1417 203752.7587 220776.1407 214475.6209 0.785451645 0.912874599 0.830427233 1.085254768 1.017464556 1.099592922 1.06661606 0.950004284 1.029376391 1 17.71045414 -5.755967903 24.99975257 1.036608537 0.849913458 0.756644355 0.049992386 65.88425795 301027.8042 0.013805829 0.023069031 1.75E-06 5.755967903 -0.186695079 SETAPAAPAAPAPAEKT(ph)PVK ddPTM_A459_MK2206_30min_R1 4 SETAPAAPAAPAPAEKTPVK 20 1 P10412 P10412 HIST1H1E Histone H1.4 1 SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK 154.69 4.24E-06 213435000 29581.3 34015.3 34817.4 28289.7 21655.3 20298.1 20688.1 26546.7 26158.1 19371.5 TRUE FALSE 27065.2551 31800.89779 32454.09189 30468.5776 20792.72355 21447.36088 19308.0346 26314.605 28877.3281 21771.38767 1.243157097 1.460673903 1.490676313 1.399477978 0.955048151 0.985116852 0.886853649 1.208678354 1.326388953 1 14.41014574 -6.249063619 23.49092989 1.058345343 1.409521943 0.603086722 0.134266305 249.080874 472789.1165 0.042910014 0.054925411 5.64E-07 6.249063619 0.351176599 SETAPAAPAAPAPAEKT(ph)PVK ddPTM_A459_MK2206_30min_R2 3 SETAPAAPAAPAPAEKTPVK 20 1 P10412 P10412 HIST1H1E Histone H1.4 1 SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK 127.49 0.00027858 200717000 343590 361694 339500 329095 368122 244962 490010 369360 369240 394440 TRUE FALSE 369895.5146 343732.8019 350818.7606 302206.8858 353667.6806 254284.2006 425671.0984 417636.6202 401355.8278 381569.4551 0.969405464 0.900839408 0.919409968 0.792010162 0.926876289 0.666416552 1.115579596 1.094523198 1.051855232 1 18.54158616 -7.296344168 24.99984791 1.073366482 0.866545823 0.578271266 0.084777826 439.5545741 314820.4038 0.034749665 0.023429257 5.05E-08 7.296344168 -0.206820658 SETAPAAPAAPAPAEKT(ph)PVKK ddPTM_A459_MK2206_30min_R1 2 SETAPAAPAAPAPAEKTPVKK 21 2 P10412 P10412 HIST1H1E Histone H1.4 1 SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK 91.401 0.00086071 36014000 12812.1 13953.1 14306.1 12424.1 8926.2 8072.7 8349.5 11855.9 11414.6 8293.6 TRUE FALSE 11722.36362 13044.75065 13335.04179 13381.00633 8570.650552 8529.769298 7792.52009 11752.24512 12601.18852 9321.073781 1.257619443 1.399490119 1.430633648 1.435564898 0.919491762 0.915105866 0.836010987 1.260825243 1.351903098 1 13.18628045 -6.253836084 24.98390068 1.043097647 1.385717737 0.526256017 0.15500638 515.1903147 1692878.892 0.051137778 0.064721038 5.57E-07 6.253836084 0.34262009 SETAPAETATPAPVEKS(ph)PAK ddPTM_A459_MK2206_30min_R1 4 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAETATPAPVEKS(1)PAK;SETAPAETATPAPVEKS(1)PAK;SETAPAETATPAPVEKS(1)PAK;SETAPAETATPAPVEKS(1)PAK 156.2 9.34E-07 375542000 15675.1 20488.8 23066.4 17540.5 12068.5 11099.2 11887 16739.3 16873.7 12004.8 TRUE FALSE 14341.85043 19154.9754 21500.71703 18891.47235 11587.78609 11727.62711 11094.03992 16592.95006 18627.7815 13492.04526 1.062985645 1.419723625 1.593584711 1.400193373 0.8588606 0.869225302 0.822265247 1.229832079 1.380649201 1 13.71982144 -6.245886691 24.10720355 1.020191001 1.388769373 0.404450559 0.202843039 540.1277376 837215.4439 0.065302045 0.083958831 5.68E-07 6.245886691 0.368578372 SETAPAETATPAPVEKS(ph)PAK ddPTM_A459_MK2206_30min_R2 6 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAETATPAPVEKS(1)PAK;SETAPAETATPAPVEKS(1)PAK;SETAPAETAT(0.001)PAPVEKS(0.999)PAK;SETAPAETATPAPVEKS(1)PAK;SETAPAETATPAPVEKS(1)PAK;SETAPAETATPAPVEKS(0.999)PAK 129.07 0.00010069 310816400 203632.8 239095 272363 214411.2 243215.5 155325 389090 312121 260453.7 277886 TRUE FALSE 219223.0837 227221.89 281443.4465 196893.1191 233665.6374 161236.0017 338002.0156 352916.2864 283107.492 268818.6026 0.81550563 0.845261034 1.046964175 0.732438593 0.86923165 0.599794806 1.257360958 1.312841756 1.053154392 1 18.03627345 -7.277569091 24.93925946 1.181909447 0.828249227 0.595165444 0.135589033 541.9415462 837929.8156 0.05615663 0.037991547 5.28E-08 7.277569091 -0.35366022 SETAPAETATPAPVEKS(ph)PAKK ddPTM_A459_MK2206_30min_R2 2 SETAPAETATPAPVEKSPAKK 21 2 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAETAT(0.001)PAPVEKS(0.999)PAKK;SETAPAETATPAPVEKS(1)PAKK 74.812 0.0012345 13211100 106388 121630 139763 114337 131719 77544 202545 159224 138172 147323 TRUE FALSE 114533.1471 115590.0311 144422.6287 104995.3014 126547.0502 80494.99126 175950.5982 180035.1235 150189.9508 142515.8626 0.803651923 0.811067828 1.013379325 0.736727123 0.887950632 0.564814259 1.234603608 1.263263754 1.053847257 1 17.12076298 -7.280682407 24.98600551 1.159867327 0.813722634 0.615747432 0.129011224 536.031325 696004.1516 0.052791432 0.035653607 5.24E-08 7.280682407 -0.346144693 SETIQDTDTQSLVGS(ph)PSTR ddPTM_A459_MK2206_30min_R1 1 SETIQDTDTQSLVGSPSTR 19 0 Q9NZN5-2;E9PMR6;Q9NZN5 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 SETIQDTDTQSLVGS(0.997)PS(0.003)TR 293.63 9.88E-86 9176800 2207.8 2327.9 2126.3 1791.6 2024.3 1836.2 2545.1 1591.9 2196 2302.9 TRUE FALSE 2020.015016 2176.353287 1981.97268 1929.589342 1943.667844 1940.164057 2375.321023 1577.982186 2424.282058 2588.200638 0.780470798 0.840875029 0.765772425 0.745533138 0.750972632 0.749618878 0.917749956 0.609683099 0.936666974 1 11.33773374 -8.503785409 21.31987236 1.000000034 0.774965531 0.543927823 0.073653877 66.50655699 74261.58902 0.066333004 0.017127109 3.13E-09 8.503785409 -0.225034502 SETIQDTDTQSLVGS(ph)PSTR ddPTM_A459_MK2206_30min_R2 4 SETIQDTDTQSLVGSPSTR 19 0 Q9NZN5-2;E9PMR6;Q9NZN5 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 SETIQDTDTQSLVGS(0.81)PS(0.142)T(0.047)R;SETIQDTDTQSLVGS(1)PSTR;SETIQDTDTQSLVGS(0.999)PS(0.001)TR;SETIQDTDTQSLVGS(1)PSTR 394.57 2.69E-294 45371100 201090 176707 177052 189291 141668 161234 152405 132423 123763 145883 TRUE FALSE 216485.605 167931.9873 182954.8253 173825.3198 136105.4025 167369.8729 132394.0404 149731.1408 134527.682 141122.8497 1.534022347 1.189970212 1.296422413 1.231730511 0.964446245 1.185987055 0.938147442 1.060998564 0.953266479 1 17.10659207 -1.522878745 0.313338552 0.970291355 5.747103206 0.742463529 0.091461946 27.41081375 0.391401125 0.084605485 74.49290541 0.03 1.522878745 4.77681185 SETSWES(ph)PK ddPTM_A459_MK2206_30min_R1 2 SETSWESPK 9 0 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 SETSWES(1)PK;SETSWES(1)PK 157.78 0.00086299 32843000 12207.1 13125.9 9335.2 9909.4 7277.3 6905.2 8178.5 7883 12553 9702.4 TRUE FALSE 11168.82204 12271.40152 8701.552633 10672.6237 6987.429731 7296.166457 7632.927188 7814.079762 13857.92927 10904.40656 1.024248498 1.125361702 0.797984978 0.978744111 0.640789546 0.66910257 0.699985565 0.716598351 1.270855887 1 13.41262364 -5.265072755 24.84115782 0.82240725 1.07480511 0.185090536 0.185866857 391.4655761 2676447.209 0.048713837 0.108224715 5.43E-06 5.265072755 0.25239786 SETSWES(ph)PK ddPTM_A459_MK2206_30min_R2 2 SETSWESPK 9 0 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 SETSWES(1)PK;SETS(0.001)WES(0.999)PK 109.16 0.011594 52096000 550510 334210 354420 327000 300640 230530 550430 308660 269600 416870 TRUE FALSE 592657.4689 317613.6174 366236.1859 300283.054 288835.363 239302.9807 478157.8798 349002.9218 293049.3207 403267.566 1.469638321 0.787600204 0.908171687 0.744624858 0.716237524 0.593409936 1.185708745 0.865437618 0.726687057 1 18.62137785 -4.759064971 24.99883209 0.831163197 1.469639154 0.589268441 0.158540189 45.69989212 481043.5664 0.039960232 0.261082156 1.74E-05 4.759064971 0.638475957 SEVLSESS(ph)ELLQQELEELRK ddPTM_A459_MK2206_30min_R1 1 SEVLSESSELLQQELEELRK 20 1 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 S(0.001)EVLS(0.069)ES(0.2)S(0.73)ELLQQELEELRK 57.171 0.020187 2173500 499.39 466.27 423.53 466.41 592.05 428.64 548.36 413.99 509.7 455.44 TRUE FALSE 456.9142581 435.9157383 394.7819636 502.332979 568.4673948 452.9092264 511.7799049 410.3705291 562.685139 511.8633456 0.892648911 0.851625228 0.771264376 0.981381033 1.110584299 0.884824495 0.999836986 0.801718921 1.099287815 1 8.999614889 -5.778961621 24.96119164 0.976244422 0.839824085 0.348800466 0.089878323 264.1427962 376281.9501 0.02488169 0.036999365 1.66E-06 5.778961621 -0.136420337 SEVQAIIESTPELDMDKDLSGYKGSST(ph)PTK ddPTM_A459_MK2206_30min_R1 1 SEVQAIIESTPELDMDKDLSGYKGSSTPTK 30 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBE9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SEVQAIIES(0.001)T(0.002)PELDMDKDLS(0.153)GY(0.138)KGS(0.189)S(0.189)T(0.235)PT(0.092)K 52.721 0.013571 26751000 1179.1 1274.5 1282.1 1017.5 942.6 789.61 880.62 1111.1 766.62 687.02 TRUE FALSE 1078.811353 1191.529818 1195.074624 1095.868026 905.054246 834.3170358 821.8754466 1101.38577 846.3128924 772.1332243 1.39718292 1.543166102 1.547757028 1.419273244 1.172147782 1.080535081 1.064421813 1.426419347 1.096071074 1 9.592705982 -6.195318759 3.336035704 1.152057195 1.498679216 0.680243839 0.113848999 0.154522715 3.402916865 0.035933139 0.046766838 6.38E-07 6.195318759 0.34662202 SEVQQPVHPKPLS(ph)PDSR ddPTM_A459_MK2206_30min_R1 3 SEVQQPVHPKPLSPDSR 17 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VRN8;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 SEVQQPVHPKPLS(0.97)PDS(0.03)R;SEVQQPVHPKPLS(0.876)PDS(0.124)R;SEVQQPVHPKPLS(0.995)PDS(0.005)R 84.762 0.0066524 22594800 9168.98 9528.37 9495.62 8580.26 8313.24 7817.39 8062.75 9011.59 7573.74 7441.42 TRUE FALSE 8389.110103 8908.071381 8851.083771 9241.113112 7982.106047 8260.003866 7524.898659 8932.802619 8361.057376 8363.319289 1.003083801 1.065135872 1.058321877 1.104957588 0.954418428 0.987646601 0.899750254 1.06809298 0.999729544 1 13.02985993 -6.269413836 24.98659374 0.984220162 1.058425369 0.379897157 0.045642332 653.6778462 2048183.171 0.014331147 0.016565432 5.38E-07 6.269413836 0.074205207 SEVQQPVHPKPLS(ph)PDSR ddPTM_A459_MK2206_30min_R2 4 SEVQQPVHPKPLSPDSR 17 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VRN8;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 SEVQQPVHPKPLS(0.913)PDS(0.087)R;SEVQQPVHPKPLS(0.991)PDS(0.009)R;SEVQQPVHPKPLS(0.967)PDS(0.033)R;SEVQQPVHPKPLS(0.919)PDS(0.081)R 98.562 0.0028265 162036400 164094 202322 180211 190937 184265 146085.1 214496 151918 146469 212375 TRUE FALSE 176657.1628 192274.9837 186219.1448 175336.8363 177029.8302 151644.4708 186332.4175 171774.2042 159208.6089 205445.2211 0.859874773 0.935894165 0.906417505 0.853448113 0.861688723 0.738126056 0.906968858 0.836107081 0.774944328 1 17.64839425 -5.827795812 3.939992273 0.842961648 0.904644185 0.079101239 0.069123811 0.438311344 13.46182579 0.018904735 0.030058538 1.49E-06 5.827795812 0.061682537 SEVQQPVHPKPLSPDS(ph)R ddPTM_A459_MK2206_30min_R2 3 SEVQQPVHPKPLSPDSR 17 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VRN8;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 SEVQQPVHPKPLS(0.369)PDS(0.631)R;SEVQQPVHPKPLS(0.382)PDS(0.618)R;SEVQQPVHPKPLS(0.03)PDS(0.97)R 133.21 0.00035596 102888200 103267.4 126628 115271 115229 133112 82629 131276 100111.3 113044 128887 TRUE FALSE 111173.6315 120339.8377 119114.0776 105814.4221 127885.354 85773.5045 114039.3035 113196.1906 122876.3628 124681.4277 0.891661521 0.965178534 0.955347398 0.8486783 1.025696901 0.687941308 0.914645473 0.907883337 0.985522583 1 16.92788706 -8.277254075 3.148676803 1.000075797 0.898646511 0.165354792 0.084249433 0.465280342 8.851150164 0.076155782 0.021675517 5.28E-09 8.277254075 -0.101429286 SEVS(ph)SPIQR ddPTM_A459_MK2206_30min_R1 1 SEVSSPIQR 9 0 A0JP02;B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;Q9HAU0-3;H0YG48 A0JP02 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 S(0.001)EVS(0.499)S(0.499)PIQR 94.409 0.023293 10051000 4917.2 4144.5 4238.7 3751.6 5334 4132.9 4723.5 4545.2 4737.9 4066.3 TRUE FALSE 4498.966319 3874.692297 3950.988854 4040.548882 5121.535485 4366.901226 4408.403934 4505.461796 5230.42166 4570.063943 0.984442751 0.847842031 0.864536887 0.884133993 1.120670421 0.955544885 0.964626313 0.985864061 1.144496385 1 12.15799864 -6.22955011 24.5546708 1.020982076 0.889660383 0.479839838 0.067616033 485.2377612 373631.6892 0.019969147 0.025777623 5.89E-07 6.22955011 -0.131321694 SEWLDPSQKS(ph)PLHVGETR ddPTM_A459_MK2206_30min_R1 1 SEWLDPSQKSPLHVGETR 18 1 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 SEWLDPS(0.171)QKS(0.828)PLHVGETR 87.208 0.0038309 45692000 1427.6 2042.9 2263.3 1543.9 2152.7 1383.5 1797.5 1655.6 1724.3 1515.6 TRUE FALSE 1306.175123 1909.906839 2109.673502 1662.811446 2066.953401 1461.832574 1677.592055 1641.125264 1903.547155 1703.36397 0.766820918 1.121255863 1.238533595 0.976192684 1.213453752 0.858203297 0.984869989 0.963461299 1.117522261 1 10.73417102 -6.768475259 24.99997208 0.982531405 1.071375144 0.074456544 0.136668832 436.5389211 1551103.664 0.047283533 0.042579291 1.70E-07 6.768475259 0.088843739 SEWLDPSQKS(ph)PLHVGETR ddPTM_A459_MK2206_30min_R2 3 SEWLDPSQKSPLHVGETR 18 1 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 SEWLDPS(0.257)QKS(0.742)PLHVGETR;SEWLDPS(0.117)QKS(0.882)PLHVGET(0.001)R;SEWLDPS(0.008)QKS(0.992)PLHVGETR 81.656 0.0056358 46819000 69677 79904 83487 72535 75323 72530 85500 63892 67978 83374 TRUE FALSE 75011.52469 75936.08355 86270.41491 66608.65847 72365.44055 75290.17997 74273.7473 72242.90377 73890.60356 80653.51321 0.930046587 0.94150993 1.069642369 0.825861836 0.897238541 0.933501555 0.920899095 0.895719243 0.916148604 1 16.29944976 -5.766630285 24.99999967 0.908977726 0.976510652 0.25013362 0.05325351 173.7151401 836637.2249 0.014617533 0.022445067 1.71E-06 5.766630285 0.067532927 SEYQWITS(ph)PSVK ddPTM_A459_MK2206_30min_R2 1 SEYQWITSPSVK 12 0 A0A2R8Y589;A0A2R8Y4C1;A0A2R8Y7U5;A8MST6;A0A2U3TZI9;A0A2R8Y5W6;A0A2R8Y432;A0A2R8YCP0;A0A2R8Y7A4;Q5JTW2;Q5JTW2-3;Q5JTW2-5;Q5JTW2-2 A0A2R8Y589 CEP78 Centrosomal protein of 78 kDa 1 SEYQWIT(0.05)S(0.898)PS(0.053)VK 133.16 0.0027841 0 27826 25585 25580 26410 24581 20551 32864 23370 21918 30245 TRUE FALSE 29956.37995 24314.4861 26432.82443 24252.21852 23615.82643 21333.08271 28548.91732 26424.53924 23824.38802 29258.10813 1.023865925 0.831034119 0.903435872 0.828905902 0.807154937 0.729134044 0.97576088 0.903152696 0.814283272 1 14.83654887 -9.951728293 10.48762277 1.000001946 0.865551806 0.187109499 0.082000784 0 0 0.079508638 0.019283677 1.12E-10 9.951728293 -0.13445014 SEYQWITS(ph)PSVKEPSK ddPTM_A459_MK2206_30min_R1 1 SEYQWITSPSVKEPSK 16 1 A0A2R8Y589;A0A2R8Y4C1;A0A2R8Y7U5;A8MST6;A0A2U3TZI9;A0A2R8Y5W6;A0A2R8Y432;A0A2R8YCP0;A0A2R8Y7A4;Q5JTW2;Q5JTW2-3;Q5JTW2-5;Q5JTW2-2 A0A2R8Y589 CEP78 Centrosomal protein of 78 kDa 1 SEYQWIT(0.161)S(0.836)PS(0.002)VKEPSK 91.637 0.0062819 9236000 1955.1 2411.4 2125.9 2106.7 1553.7 1599.2 1958.3 2341.3 1516.2 1183.8 TRUE FALSE 1788.808478 2254.417422 1981.599831 2268.958399 1491.812839 1689.745322 1827.66538 2320.830261 1673.814416 1330.458081 1.344505703 1.694467081 1.489411699 1.705396383 1.121277596 1.270047772 1.37371136 1.744384354 1.258073771 1 10.37770734 -12.85617319 0.232402757 1.20E-10 1.51118427 0.320967199 0.199317604 88.56990186 1.770845138 43.32450777 0.36367057 1.39E-13 12.85617319 1.51118427 SFAPS(ph)TPLTGR ddPTM_A459_MK2206_30min_R1 3 SFAPSTPLTGR 11 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 S(0.001)FAPS(0.5)T(0.5)PLTGR;SFAPS(0.5)T(0.5)PLTGR;S(0.001)FAPS(0.633)T(0.366)PLTGR 145.14 0.00070712 183939000 27477.4 25936.4 26186.7 22408.2 27483.5 25359.6 27439.3 24956.5 23482.4 21295.3 TRUE FALSE 25140.30284 24247.93565 24409.21976 24134.08345 26388.774 26795.43864 25608.87436 24738.30795 25923.47951 23933.52254 1.050422177 1.013136934 1.019875772 1.008379916 1.102586297 1.119577722 1.070000219 1.033625866 1.083145177 1 14.54674513 -6.249686019 24.9723359 1.072500483 1.022032648 0.301611539 0.033293676 883.6714746 1877534.977 0.009995794 0.012795465 5.63E-07 6.249686019 -0.050467835 SFAPS(ph)TPLTGR ddPTM_A459_MK2206_30min_R2 2 SFAPSTPLTGR 11 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 SFAPS(0.637)T(0.363)PLTGR;SFAPS(0.498)T(0.498)PLT(0.003)GR 147.58 0.00066406 24446000 139673 175814 162259 186661 188063 198900 194870 149134 158841 185315 TRUE FALSE 150366.4723 167083.3324 167668.6341 171410.1992 180678.7017 206469.2789 169283.3349 168626.3259 172656.7031 179268.1867 0.838779457 0.932030024 0.935294974 0.956166302 1.007868183 1.151734073 0.944302154 0.940637204 0.963119593 1 17.45175996 -4.841539973 0.945267011 0.998278549 0.776833451 0.407582586 0.058057595 2.168932091 1.632089759 0.021955463 0.485155384 1.44E-05 4.841539973 -0.221445098 SFAPST(ph)PLTGR ddPTM_A459_MK2206_30min_R1 1 SFAPSTPLTGR 11 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 SFAPS(0.224)T(0.775)PLTGR 163.45 0.0014929 42396000 7084.4 7430.2 7013.3 5810.3 6739.8 6569.7 7007.6 5445.3 6738.5 6170.1 TRUE FALSE 6481.834578 6946.49263 6537.256736 6257.810313 6471.339494 6941.670737 6540.13579 5397.692316 7438.991189 6934.49857 0.934722895 1.001729622 0.942715132 0.902417132 0.933209435 1.001034273 0.943130311 0.778382498 1.072751132 1 12.75957585 -5.490168194 23.5521561 0.93821781 0.969225312 0.00331765 0.07415345 1405.414177 1011915.22 0.018730976 0.038926423 3.23E-06 5.490168194 0.031007503 SFATASHR ddPTM_A459_MK2206_30min_R2 2 SFATASHR 8 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;Q9NYF8-2;Q9NYF8 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 0 ; 125.31 0.0067241 1019300 12507.2 19491.7 13537.6 19553.6 20808.3 15005 18804.2 19733 21820.2 16461.7 FALSE TRUE 13464.76085 18523.77052 13988.93683 17956.00833 19991.26159 15576.02579 16335.18595 22312.17085 23718.08155 15924.55608 0.845534455 1.163220528 0.878450662 1.127567277 1.255373242 0.978113658 1.025785954 1.40111729 1.489402997 1 13.95896554 -7.755837639 24.99896942 1.33394513 1.047110074 0.326815009 0.166679676 135.4174075 604337.2693 0.078156529 0.043497556 1.75E-08 7.755837639 -0.286835056 SFDYGNLSHAPVSGAAAS(ph)TVSPSR ddPTM_A459_MK2206_30min_R2 1 SFDYGNLSHAPVSGAAASTVSPSR 24 0 P31629 P31629 HIVEP2 Transcription factor HIVEP2 1 SFDYGNLSHAPVS(0.098)GAAAS(0.305)T(0.305)VS(0.232)PS(0.06)R 73.761 0.0043299 0 5134.9 7597.3 8150.5 7858.9 8552 7160 7976.8 6436.1 7104.2 6597.8 TRUE FALSE 5528.031892 7220.02913 8422.233602 7216.802731 8216.20551 7432.478817 6929.436578 7277.320368 7722.110475 6382.514326 0.866121345 1.131220199 1.319579271 1.130714694 1.287299188 1.164506406 1.085690721 1.14019648 1.209885334 1 12.63990916 -4.777638717 4.417812887 1.17521438 0.843836656 0.509652541 0.087666178 0.148989972 6.202199631 0.021211896 0.153524959 1.67E-05 4.777638717 -0.331377723 SFELPPYTPPPILS(ph)PVR ddPTM_A459_MK2206_30min_R1 2 SFELPPYTPPPILSPVR 17 0 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 SFELPPYTPPPILS(1)PVR;SFELPPYTPPPILS(1)PVR 227.41 3.17E-16 43028000 12016.6 12114.8 11384.3 9835.5 10556.5 9325.8 10194.8 7891.2 8599.3 8509.3 TRUE FALSE 10994.52507 11326.12432 10611.56543 10593.03191 10136.01225 9853.818737 9514.723493 7822.20807 9493.228008 9563.496326 1.149634474 1.184307907 1.10959058 1.107652636 1.059864709 1.030357351 0.994900104 0.817923467 0.992652445 1 13.22332244 -6.700789327 0.943402585 0.930359757 1.15499884 0.717854408 0.052509901 0.277259124 0.535399283 0.030290564 0.029652113 1.99E-07 6.700789327 0.224639083 SFELPPYTPPPILS(ph)PVR ddPTM_A459_MK2206_30min_R2 1 SFELPPYTPPPILSPVR 17 0 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 SFELPPYTPPPILS(1)PVR 159.44 3.11E-05 32195000 75138 79332 62828 76739 66957 60345 70118 54320 59976 58868 TRUE FALSE 80890.62305 75392.48824 64922.65416 70469.17822 64327.93175 62641.47126 60911.42237 61419.81051 65192.60407 56947.14198 1.42045097 1.323902932 1.14005114 1.2374489 1.129607729 1.099993241 1.069613334 1.078540702 1.1447915 1 15.79733582 -1.522878745 0.3644712 1.060822159 5.843351584 0.85645426 0.045788836 22.35344122 0.310650879 0.036331065 74.47097694 0.03 1.522878745 4.782529425 SFENVSVESVDS(ph)SSEK ddPTM_A459_MK2206_30min_R1 1 SFENVSVESVDSSSEK 16 0 Q52LW3;F8VWZ8;Q52LW3-2 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 SFENVSVESVDS(0.787)S(0.084)S(0.129)EK 112.3 0.0026576 0 689.64 579.86 321.38 352.41 897.37 994.9 897.24 519.99 591.98 426.89 TRUE FALSE 630.9824966 542.1110086 299.565621 379.5526793 861.6258527 1051.230378 837.3867567 515.4437823 653.5184394 479.7763561 1.315159633 1.129924394 0.624385961 0.791103343 1.79589061 2.191084169 1.745368954 1.074341776 1.3621314 1 8.906218251 -6.258163731 24.98556479 1.575862285 0.952573583 0.350825695 0.3716404 328.9347896 2509004.783 0.121828789 0.150704975 5.52E-07 6.258163731 -0.623288702 SFETFSHR ddPTM_A459_MK2206_30min_R1 4 SFETFSHR 8 0 P30838;A8MYB8;I3L3I9 P30838 ALDH3A1 "Aldehyde dehydrogenase, dimeric NADP-preferring" 0 ;;; 225.24 0.00013773 73409600 31355.5 27469.1 31500.9 22235.7 34143.4 29754.3 33645.6 28313.3 25721.4 25401.3 FALSE TRUE 28688.55007 25680.8566 29362.70667 23948.29747 32783.39608 31438.96275 31401.16341 28065.7598 28395.23157 28548.20481 1.00491608 0.899561173 1.028530756 0.838872273 1.14835228 1.101258834 1.099934781 0.983100688 0.994641581 1 14.80111241 -6.266758757 24.99934636 1.058307936 0.945980913 0.379238671 0.06979241 486.2960332 2285430.25 0.021676281 0.025308006 5.41E-07 6.266758757 -0.112327023 SFETFSHR ddPTM_A459_MK2206_30min_R2 5 SFETFSHR 8 0 P30838;A8MYB8;I3L3I9 P30838 ALDH3A1 "Aldehyde dehydrogenase, dimeric NADP-preferring" 0 ;;;; 209.11 0.00018902 93949200 369915 541522 460021 555750 487538 579897 490769 432506 520252 430275 FALSE TRUE 398235.9768 514630.8049 475357.8705 510343.4472 468394.8084 601965.3867 426330.4408 489036.0192 565502.5786 416235.162 0.956757173 1.236394356 1.1420416 1.22609403 1.125312927 1.446214644 1.024253787 1.174903189 1.358613184 1 18.66703932 -4.755814973 24.68702816 1.198134485 0.956756718 0.228656713 0.129623919 222.7234336 977472.8781 0.030259348 0.258333441 1.75E-05 4.755814973 -0.241377768 SFEVEEVET(ph)PNST(ph)PPR ddPTM_A459_MK2206_30min_R1 1 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 Sep-09 Septin-9 2 SFEVEEVET(0.942)PNS(0.353)T(0.705)PPR 128.74 0.0076205 2073400 1142.6 1093.6 1062.5 700.86 962.58 944.58 1067.9 819.09 722.62 716.9 TRUE FALSE 1045.41587 1022.406441 990.3804603 754.8403586 924.2384003 998.0613033 996.6623395 811.9287825 797.7389349 805.7149843 1.297500841 1.268943064 1.229194541 0.936857789 1.147103403 1.238727494 1.236991193 1.007712154 0.990100656 1 9.654125776 -1.522878745 0.16922199 0.985363456 2.211104997 0.400019681 0.10075856 73.22395824 0.78996541 0.295027877 22.68926805 0.03 1.522878745 1.225741541 SFEVEEVETPNS(ph)TPPRR ddPTM_A459_MK2206_30min_R1 3 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 Sep-09 Septin-9 1 SFEVEEVET(0.185)PNS(0.408)T(0.408)PPRR;SFEVEEVETPNS(0.656)T(0.344)PPRR;SFEVEEVET(0.025)PNS(0.941)T(0.034)PPRR 174.4 4.52E-07 57043400 9371.3 7391.8 7490.7 6570.3 8199.1 7329.7 7818 7948.1 6993.2 6263.02 TRUE FALSE 8574.221724 6910.592476 6982.252154 7076.345644 7872.512485 7744.70128 7296.475485 7878.6106 7720.168165 7038.930201 1.218114327 0.981767439 0.991947917 1.005315501 1.11842457 1.10026681 1.036588697 1.119290911 1.096781463 1 12.78114046 -6.261550531 24.99996363 1.083510188 1.040367924 0.030411492 0.071226916 29.58131255 6652577.849 0.02131182 0.025897071 5.48E-07 6.261550531 -0.043142264 SFEVEEVETPNS(ph)TPPRR ddPTM_A459_MK2206_30min_R2 1 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 Sep-09 Septin-9 1 SFEVEEVET(0.017)PNS(0.492)T(0.492)PPRR 87.352 0.0054805 27112000 57984 69999 66638 71146 69971 73675 70079 65431 65063 67289 TRUE FALSE 62423.29962 66522.95145 68859.67766 65333.14422 67223.58696 76478.75375 60877.54312 73983.05636 70722.06213 65093.36544 0.958980984 1.021962085 1.057860155 1.003683613 1.032725632 1.174908583 0.935234224 1.13656831 1.086471127 1 15.99022289 -2.908201072 0.614536667 1.063371897 1.88E-17 0.162908606 0.065232677 53.40258344 2.322364112 0.02821271 65.38368837 0.001235375 2.908201072 -1.063371897 SFEVEEVETPNST(ph)PPRR ddPTM_A459_MK2206_30min_R2 1 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 Sep-09 Septin-9 1 SFEVEEVETPNS(0.451)T(0.548)PPRR 111.45 0.0025285 28745000 70648 76898 63758 79410 80925 75287 88007 59260 78841 73159 TRUE FALSE 76056.8652 73079.35714 65883.6599 72921.94898 77747.47788 78152.09954 76451.57518 67005.48547 85698.44767 70771.82782 1.074677136 1.032605196 0.930930597 1.030381032 1.098565351 1.104282621 1.080254355 0.946781898 1.210911888 1 16.11088756 -6.012013128 24.10406122 1.071938808 1.009046312 0.12827755 0.072761044 728.2777158 1461278.477 0.020542335 0.028056655 9.73E-07 6.012013128 -0.062892497 SFFDNISCDDNR ddPTM_A459_MK2206_30min_R2 1 SFFDNISCDDNR 12 0 Q8ND56-3;Q8ND56-2;Q8ND56;A0A0G2JQ95;A0A096LP11;A0A140TA76 Q8ND56-3;A0A140TA76 LSM14A Protein LSM14 homolog A 0 137.01 0.018836 3511400 11019 14515 11842 19119 13151 17767 17943 12878 13806 12865 FALSE TRUE 11862.62311 13794.20621 12236.80637 17556.91654 12634.62566 18443.13563 15587.06255 14561.19882 15006.82092 12445.2161 0.953187395 1.108394269 0.983253828 1.410736173 1.015219467 1.481945792 1.252454149 1.170023782 1.205830481 1 13.60330366 -5.732871578 24.99976948 1.230344779 1.024289944 0.288693084 0.146192792 260.0017619 227526.442 0.037463633 0.064873608 1.85E-06 5.732871578 -0.206054835 SFGDKDLILPNGGTPAGTS(ph)SPASSSSLLNR ddPTM_A459_MK2206_30min_R1 1 SFGDKDLILPNGGTPAGTSSPASSSSLLNR 30 1 Q5VWJ9 Q5VWJ9 SNX30 Sorting nexin-30 1 SFGDKDLILPNGGTPAGT(0.039)S(0.453)S(0.453)PAS(0.027)S(0.01)S(0.014)S(0.005)LLNR 123.19 1.55E-16 9022900 2565.3 2684.4 2725.8 2327.2 2733.6 2443.3 2331.9 2649.4 2281.2 1869.5 TRUE FALSE 2347.107764 2509.645072 2540.780291 2506.441347 2624.714924 2581.637535 2176.343206 2626.236575 2518.338903 2101.107774 1.117081091 1.194439002 1.209257479 1.192914223 1.249205279 1.228703052 1.035807507 1.249929493 1.198576739 1 11.03693445 -11.21845675 7.95985638 0.999290863 1.187882283 0.450365087 0.061689407 0.000776486 2.97E-05 0.059742246 0.014437575 6.05E-12 11.21845675 0.188591421 SFGS(ph)PNR ddPTM_A459_MK2206_30min_R1 2 SFGSPNR 7 0 D6R9G1;D6RAD4;P50613;D6REC6 D6R9G1 CDK7 Cyclin-dependent kinase 7 1 S(0.001)FGS(0.999)PNR;SFGS(1)PNR 131.52 0.0072288 32964100 14371.7 14229.3 13954 12292.5 13891.3 13066.4 14341 11917.9 7913.4 10278.9 TRUE FALSE 13149.31145 13302.96998 13006.84136 13239.27048 13337.98011 13806.20828 13384.33806 11813.70306 8736.026248 11552.32773 1.138239128 1.151540217 1.125906541 1.14602622 1.154570785 1.195101853 1.158583652 1.022625338 0.756213505 1 13.49589596 -7.985549855 3.955887915 0.876815515 1.151996845 0.783468864 0.057793163 0.084123037 2.938335659 0.035386332 0.014263321 1.03E-08 7.985549855 0.27518133 SFGS(ph)PNR ddPTM_A459_MK2206_30min_R2 1 SFGSPNR 7 0 D6R9G1;D6RAD4;P50613;D6REC6 D6R9G1 CDK7 Cyclin-dependent kinase 7 1 SFGS(1)PNR 101.38 0.036885 4071900 36469 42595 41187 41360 41843 43718 43646 32022 36785 41062 TRUE FALSE 39261.09468 40479.79424 42560.15402 37980.7557 40200.03358 45381.71912 37915.22777 36207.38535 39984.49281 39722.1503 0.988392984 1.019073588 1.071446377 0.956160616 1.01203065 1.142478914 0.954510959 0.911516247 1.006604439 1 15.2776561 SFGTRPLS(ph)SGFSPEEAQQQDEEFEK ddPTM_A459_MK2206_30min_R1 1 SFGTRPLSSGFSPEEAQQQDEEFEK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(0.018)FGT(0.016)RPLS(0.421)S(0.421)GFS(0.125)PEEAQQQDEEFEK 62.678 0.0022796 65384000 2950.7 4013.7 4400.3 4144.8 4600.6 3799.8 4313.1 4066.1 3505.3 3725.1 TRUE FALSE 2699.72747 3752.4074 4101.619896 4464.033214 4417.34836 4014.941392 4025.380969 4030.550516 3869.688479 4186.593511 0.644850632 0.896291314 0.9797034 1.066268603 1.055117567 0.958999574 0.961493147 0.962727933 0.9243048 1 12.03156113 -4.748518785 2.198204112 0.990199951 0.535244923 0.862459304 0.041419809 0.275849471 1.438938836 0.012443892 0.257124799 1.78E-05 4.748518785 -0.454955028 SFGTRPLS(ph)SGFSPEEAQQQDEEFEK ddPTM_A459_MK2206_30min_R2 2 SFGTRPLSSGFSPEEAQQQDEEFEK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(0.032)FGT(0.02)RPLS(0.316)S(0.316)GFS(0.316)PEEAQQQDEEFEK;S(0.02)FGT(0.021)RPLS(0.413)S(0.413)GFS(0.134)PEEAQQQDEEFEK 61.844 0.0028396 252370000 160747 194976 203055 167386 209165 179701 225034 165063 164591 232262 TRUE FALSE 173053.9139 185293.7754 209824.7524 153710.0284 200952.1311 186539.6475 195486.7655 186637.3008 178906.8277 224683.31 0.770212589 0.824688649 0.933868886 0.684118586 0.894379432 0.830233663 0.870054681 0.83066829 0.796262204 1 17.77753344 -11.31325044 2.4551775 1.052389534 0.828572737 0.390144574 0.065174895 12972943.93 8532720.948 4059016.782 0.016535184 4.86E-12 11.31325044 -0.223816797 SFGTRPLSS(ph)GFSPEEAQQQDEEFEK ddPTM_A459_MK2206_30min_R1 2 SFGTRPLSSGFSPEEAQQQDEEFEK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(0.001)FGT(0.002)RPLS(0.176)S(0.665)GFS(0.156)PEEAQQQDEEFEK;SFGT(0.001)RPLS(0.174)S(0.412)GFS(0.412)PEEAQQQDEEFEK 95.141 4.38E-06 415469000 3716.7 5149.7 5478.5 5056.6 4402.6 3914.6 4751.7 4869.6 4305.6 4073.4 TRUE FALSE 3400.575148 4814.453594 5106.634684 5446.060208 4227.235119 4136.241269 4434.722763 4827.025601 4753.182528 4578.043545 0.742800962 1.051639974 1.115462235 1.189604283 0.92337154 0.903495397 0.96869388 1.054386127 1.038256295 1 12.16051547 -4.758517684 24.92186146 1.02780447 0.74280056 0.524967185 0.081162285 70.71757303 603102.0503 0.02262107 0.154025278 1.74E-05 4.758517684 -0.28500391 SFGTRPLSS(ph)GFSPEEAQQQDEEFEK ddPTM_A459_MK2206_30min_R2 1 SFGTRPLSSGFSPEEAQQQDEEFEK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(0.016)FGT(0.016)RPLS(0.124)S(0.422)GFS(0.422)PEEAQQQDEEFEK 55.588 0.0070434 7120200 6818.6 9696.4 10320 11191 10511 9316 12191 9565.3 9499.4 10319 TRUE FALSE 7340.637259 9214.890876 10664.06365 10276.6595 10098.28533 9670.526908 10590.30706 10815.51755 10325.64064 9982.291875 0.735365921 0.923123767 1.068298121 1.029488982 1.011619922 0.968768198 1.060909377 1.083470378 1.034395785 1 13.28515537 -4.853654642 2.533734889 1.032792879 0.69624027 0.884084119 0.032961987 0.13792878 1.292315299 0.009254271 0.094922844 1.40E-05 4.853654642 -0.336552609 SFGTRPLSSGFS(ph)PEEAQQQDEEFEK ddPTM_A459_MK2206_30min_R1 2 SFGTRPLSSGFSPEEAQQQDEEFEK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(0.044)FGT(0.01)RPLS(0.16)S(0.341)GFS(0.444)PEEAQQQDEEFEK;S(0.004)FGT(0.004)RPLS(0.263)S(0.263)GFS(0.466)PEEAQQQDEEFEK 77.469 0.00014333 423418000 1963.01 2377.08 2778.8 2666.03 2205.76 1975.63 2124.6 2549.93 2357.5 1868.1 TRUE FALSE 1796.045691 2222.33166 2590.182798 2871.368093 2117.899908 2087.488463 1982.871811 2527.636231 2602.570561 2099.534331 0.855449546 1.058487888 1.233693948 1.367621405 1.008747453 0.9942626 0.944434097 1.203903262 1.239594191 1 11.03585366 -10.73089932 4.71902956 0.999980994 1.103815701 0.038594488 0.150032608 3.21E-05 5.38E-06 0.155327675 0.037665601 1.86E-11 10.73089932 0.103834707 SFGTRPLSSGFS(ph)PEEAQQQDEEFEK ddPTM_A459_MK2206_30min_R2 2 SFGTRPLSSGFSPEEAQQQDEEFEK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(0.03)FGT(0.062)RPLS(0.282)S(0.282)GFS(0.343)PEEAQQQDEEFEK;S(0.003)FGT(0.006)RPLS(0.122)S(0.361)GFS(0.508)PEEAQQQDEEFEK 77.505 0.00014288 124980100 34865 38784 37258 46070 47471 37090 46431 33723.9 36311 45124 TRUE FALSE 37534.29121 36858.04296 38500.16312 42305.93363 45607.05002 38501.48594 40334.55393 38131.72952 39469.26514 43651.60758 0.859860456 0.844368513 0.881987291 0.969172408 1.044796573 0.882017595 0.924010733 0.87354697 0.904188124 1 15.41374717 -5.58137761 5.19856939 0.937991959 0.854324876 0.358825 0.050015342 0.232960469 12.81285101 0.014716445 0.026380675 2.62E-06 5.58137761 -0.083667083 SFIS(ph)PASIR ddPTM_A459_MK2206_30min_R1 1 SFISPASIR 9 0 C9IYV0;Q8N8L2 C9IYV0 ZNF491 Zinc finger protein 491 1 SFIS(0.97)PAS(0.03)IR 88.819 0.020301 97791000 12353 12882 12322 10102 11066 11364 12260 9555.8 11051 11126 TRUE FALSE 11302.31248 12043.37946 11485.61697 10880.05779 10625.21779 12007.41986 11442.15777 9472.254648 12199.791 12504.37288 0.903868798 0.963133424 0.918528029 0.870100236 0.849720165 0.960257662 0.915052509 0.75751537 0.975641971 1 13.61014508 -5.530002582 21.85972691 0.894462965 0.935333517 0.016350816 0.067523282 105.3824502 323366.3597 0.017739373 0.030869314 2.95E-06 5.530002582 0.040870552 SFIS(ph)PASIR ddPTM_A459_MK2206_30min_R2 1 SFISPASIR 9 0 C9IYV0;Q8N8L2 C9IYV0 ZNF491 Zinc finger protein 491 1 SFIS(0.763)PAS(0.237)IR 86.67 0.022185 9168200 48047 57490 43858 63111 57226 49136 54524 50091 45201 51484 TRUE FALSE 51725.51526 54635.1302 45320.20383 57954.62942 54979.0197 51005.90491 47364.9333 56638.06569 49132.50128 49804.0813 1.03857985 1.097001064 0.909969678 1.163652213 1.10390591 1.024131027 0.951025138 1.137217357 0.986515563 1 15.60397635 -10.17529582 9.527645075 0.999994853 1.047732229 0.030059715 0.077296168 0 0 0.072568688 0.017600492 6.68E-11 10.17529582 0.047737376 SFISPAS(ph)IR ddPTM_A459_MK2206_30min_R2 1 SFISPASIR 9 0 C9IYV0;Q8N8L2 C9IYV0 ZNF491 Zinc finger protein 491 1 SFIS(0.34)PAS(0.66)IR 84.476 0.024109 10477000 60199 72213 68048 76819 69197 64803 77347 60688 51448 68646 TRUE FALSE 64807.88173 68627.00743 70316.68636 70542.64197 66479.97809 67269.12357 67191.24599 68620.12997 55922.85404 66406.08664 0.975932855 1.033444536 1.058889176 1.06229181 1.001112721 1.012996353 1.011823605 1.03334097 0.842134462 1 16.01902786 -8.232648341 24.96905573 0.92106721 1.025001818 0.477518627 0.042938018 476.3072333 413079.1772 0.027459344 0.010374157 5.85E-09 8.232648341 0.103934608 SFLDSGY(ph)R ddPTM_A459_MK2206_30min_R1 1 SFLDSGYR 8 0 P18206;P18206-2 P18206 VCL Vinculin 1 SFLDSGY(1)R 153.04 0.012813 16475000 3229.6 3689.9 3661 3300.9 4015.9 3211.7 3686.5 3698.9 3030.3 2910.4 TRUE FALSE 2954.905561 3449.686839 3412.50152 3555.13589 3855.938199 3393.543679 3440.580311 3666.560907 3345.310529 3270.962324 0.903374991 1.054639735 1.043271423 1.086877664 1.178839074 1.037475624 1.051855683 1.120942568 1.022729765 1 11.67549943 -4.327207813 1.597511483 1.076040132 0.545500308 0.48833468 0.049538351 3.205116232 2.931252505 0.013517772 3.798183186 4.71E-05 4.327207813 -0.530539825 SFLGS(ph)PAAGTLAELQPPVQLPAEGCHR ddPTM_A459_MK2206_30min_R2 1 SFLGSPAAGTLAELQPPVQLPAEGCHR 27 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 S(0.452)FLGS(0.548)PAAGTLAELQPPVQLPAEGCHR 90.869 1.72E-05 3589800 3336 3653.2 3688.9 4018.2 3867.7 2434.6 6254 862.29 3907.6 3955.8 TRUE FALSE 3591.406725 3471.7874 3811.886085 3689.900206 3715.834664 2527.250409 5432.842288 974.9942637 4247.475985 3826.72257 0.938507211 0.907248262 0.996122926 0.964245549 0.971022748 0.660421644 1.419711565 0.25478572 1.109951377 1 11.9018936 -7.752397228 24.9999429 0.761776329 0.964265294 0.089990404 0.271982277 414.8713124 1147053.744 0.119517237 0.06772117 1.77E-08 7.752397228 0.202488964 SFLSEPSS(ph)PGR ddPTM_A459_MK2206_30min_R1 3 SFLSEPSSPGR 11 0 Q69YN4-3;Q69YN4;H0YC41 Q69YN4-3 KIAA1429 Protein virilizer homolog 1 SFLSEPS(0.001)S(0.999)PGR;SFLSEPS(0.001)S(0.999)PGR;SFLSEPS(0.002)S(0.998)PGR 168.85 0.00045552 302201000 22332.3 20393.7 21490.5 18131.4 22027.8 20123.3 22545 20362.4 18112.6 15362.7 TRUE FALSE 20432.82061 19066.06642 20031.78474 19527.88357 21150.38608 21262.66386 21041.06419 20184.37368 19995.46959 17265.94726 1.183417296 1.10425835 1.160190312 1.131005631 1.224976873 1.231479718 1.218645225 1.169027878 1.15808703 1 14.07564187 -8.9222212 2.137413804 1.000020651 1.177799323 0.655520543 0.038449648 2.045186138 10.16292523 0.041548617 0.011381234 1.20E-09 8.9222212 0.177778672 SFLSEPSS(ph)PGR ddPTM_A459_MK2206_30min_R2 6 SFLSEPSSPGR 11 0 Q69YN4-3;Q69YN4;H0YC41 Q69YN4-3 KIAA1429 Protein virilizer homolog 1 SFLSEPS(0.003)S(0.997)PGR;SFLSEPS(0.002)S(0.998)PGR;SFLSEPS(0.002)S(0.998)PGR;SFLSEPS(0.002)S(0.998)PGR;SFLSEPS(0.001)S(0.999)PGR;SFLSEPS(0.002)S(0.997)PGR 196.67 1.98E-05 440983000 867626 1106736 949456 1070672 1104727 1118118 1173838 842270 970136 994058 TRUE FALSE 934052.1137 1051777.1 981110.3892 983194.6727 1061349.867 1160668.764 1019711.661 952357.5809 1054516.676 961621.9689 0.971329841 1.093753194 1.020266197 1.022433664 1.103708007 1.20699069 1.060408033 0.990365873 1.096602105 1 19.87511033 -4.751938653 24.48542841 1.068367367 0.971329589 0.177691816 0.060952719 551.3619117 1420845.974 0.016009025 0.19645929 1.77E-05 4.751938653 -0.097037778 SFLVASVLPGPDGNINS(ph)PTR ddPTM_A459_MK2206_30min_R1 2 SFLVASVLPGPDGNINSPTR 20 0 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-3;Q7Z3K3-6;Q7Z3K3 Q7Z3K3-5 POGZ Pogo transposable element with ZNF domain 1 SFLVASVLPGPDGNINS(0.997)PT(0.003)R;SFLVASVLPGPDGNINS(0.948)PT(0.052)R 298 2.11E-100 59822000 6976.2 6443.5 6227.8 6216.1 7328.2 6603 6747 6001.3 5747.2 5030.3 TRUE FALSE 6382.837557 6024.026979 5805.074288 6694.865099 7036.302276 6976.856154 6296.919941 5948.831267 6344.642007 5653.491541 1.129008067 1.065540991 1.026812236 1.184200074 1.244594111 1.234079171 1.113810801 1.052240235 1.122251968 1 12.46492642 -8.577709375 1.010015955 1.005492454 1.140648101 0.258103099 0.068555741 0.996953983 2.211675749 0.075026538 0.024750981 2.64E-09 8.577709375 0.135155647 SFLVASVLPGPDGNINS(ph)PTR ddPTM_A459_MK2206_30min_R2 2 SFLVASVLPGPDGNINSPTR 20 0 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-3;Q7Z3K3-6;Q7Z3K3 Q7Z3K3-5 POGZ Pogo transposable element with ZNF domain 1 SFLVASVLPGPDGNINS(0.957)PT(0.043)R;SFLVASVLPGPDGNINS(0.849)PT(0.151)R 150.65 1.33E-05 31614000 44062 45509 47593 53651 56308 53422 56163 46985 45253 51818 TRUE FALSE 47435.4206 43249.08924 49179.72687 49267.54168 54097.065 55455.01164 48788.73064 53126.10082 49189.02414 50127.1829 0.946301345 0.862787149 0.981098957 0.982850797 1.079196194 1.106286219 0.973298873 1.059826181 0.981284431 1 15.61330554 -5.644780753 2.05091724 1.035111992 0.905936574 0.514549411 0.046478634 0.241144525 2.043341631 0.013714433 0.030298773 2.27E-06 5.644780753 -0.129175418 SFLVIVDGS(ph)PK ddPTM_A459_MK2206_30min_R1 2 SFLVIVDGSPK 11 0 Q9H116;Q9H116-4 Q9H116 GZF1 GDNF-inducible zinc finger protein 1 1 SFLVIVDGS(1)PK;SFLVIVDGS(1)PK 137.62 0.0013177 16389900 9017.3 11585.6 11867.8 9276.1 6711.6 6426.9 7487.9 7325.9 10121.6 8112.6 TRUE FALSE 8250.331283 10831.37533 11062.2468 9990.546829 6444.26276 6790.785524 6988.395853 7261.850429 11173.77654 9117.650135 0.904874739 1.187956894 1.213278272 1.095737024 0.706789871 0.74479558 0.766468964 0.796460746 1.225510562 1 13.15444634 -6.170333473 7.579558614 0.851714534 1.116763127 0.31278449 0.162473744 0.317545611 23.40015577 0.04888813 0.063273954 6.76E-07 6.170333473 0.265048593 SFLVIVDGS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SFLVIVDGSPK 11 0 Q9H116;Q9H116-4 Q9H116 GZF1 GDNF-inducible zinc finger protein 1 1 SFLVIVDGS(1)PK;SFLVIVDGS(1)PK 122.66 0.0040868 5624200 68461 66437 61544 52900 63257 45984 77504 50683 41459 72472 TRUE FALSE 73702.4268 63137.83519 63595.84624 48577.90078 60773.21234 47733.95334 67327.6317 57307.44212 45065.02888 70107.24458 1.05128118 0.900589312 0.907122319 0.69290843 0.866860661 0.680870481 0.960351988 0.817425395 0.642801313 1 16.09727591 -4.813098341 1.343459261 0.807180232 1.138288968 0.286650309 0.112852099 1.523008661 2.548132827 0.031804757 0.683579528 1.54E-05 4.813098341 0.331108737 SFPIKPVPS(ph)PSWSGSCR ddPTM_A459_MK2206_30min_R1 1 SFPIKPVPSPSWSGSCR 17 1 Q9P0U3;Q9P0U3-2 Q9P0U3 SENP1 Sentrin-specific protease 1 1 SFPIKPVPS(0.824)PS(0.116)WS(0.059)GS(0.001)CR 145.8 0.002177 7130000 869.65 631.35 525.17 712.38 578.49 654.2 684.49 832.94 491.67 706.4 TRUE FALSE 795.6817008 590.2490002 489.5229236 767.247631 555.4475183 691.2402387 638.828921 825.6576934 542.780856 793.914165 1.002226356 0.743467022 0.616594268 0.966411313 0.699631702 0.870673769 0.804657417 1.039983577 0.683677002 1 9.632839227 -6.961738364 24.98952588 0.878590817 0.799088456 0.06363461 0.141349503 474.2378434 309734.0222 0.047882047 0.042227922 1.09E-07 6.961738364 -0.079502361 SFPIKPVPSPSWSGS(ph)CR ddPTM_A459_MK2206_30min_R2 1 SFPIKPVPSPSWSGSCR 17 1 Q9P0U3;Q9P0U3-2 Q9P0U3 SENP1 Sentrin-specific protease 1 1 SFPIKPVPS(0.305)PS(0.305)WS(0.033)GS(0.357)CR 106.19 0.012226 4880800 28406 33825 29351 35177 27267 29367 28093 20133 24250 24515 TRUE FALSE 30580.7852 32145.29969 30329.54769 32302.92657 26196.36057 30484.58176 24404.35535 22764.45223 26359.22117 23715.07756 1.289508125 1.355479425 1.278914126 1.36212612 1.104628923 1.285451489 1.029064961 0.959914728 1.111496309 1 14.53351697 -6.95171746 0.967357413 1.008331538 1.32153081 0.718901186 0.076977065 0.280799471 0.549274528 0.047983773 0.036273999 1.12E-07 6.95171746 0.313199273 SFPSS(ph)PSK ddPTM_A459_MK2206_30min_R2 2 SFPSSPSK 8 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A2ABF9;A0A0G2JK64;Q96KQ7-3;Q96KQ7 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 SFPS(0.086)S(0.907)PS(0.007)K;SFPS(0.079)S(0.755)PS(0.166)K 126.31 0.0040914 11589000 137128 130607 132587 118731 124199 98989 167497 140580 99510 168105 TRUE FALSE 147626.6251 124121.2463 137007.3844 109030.2975 119322.3232 102756.0958 145504.4427 158954.2887 108165.1999 162619.7476 0.907802572 0.763260601 0.842501519 0.670461608 0.733750513 0.631879567 0.894752604 0.97745994 0.665141851 1 17.31114294 -10.45465069 6.195248157 1.000000051 0.787502903 0.250824459 0.110204154 7.98E-08 1.37E-08 0.109223767 0.026490648 3.51E-11 10.45465069 -0.212497148 SFS(ph)ADNFIGIQR ddPTM_A459_MK2206_30min_R2 2 SFSADNFIGIQR 12 0 Q8N7R7-3;Q8N7R7-2;Q8N7R7 Q8N7R7-3 CCNYL1 Cyclin-Y-like protein 1 1 S(0.047)FS(0.953)ADNFIGIQR;S(0.143)FS(0.857)ADNFIGIQR 157.09 0.00044141 14291300 32302.3 21187.3 25021.3 24687.7 23220.7 28409.6 36896 20610.1 34983 32352 TRUE FALSE 34775.38892 20135.16949 25855.49765 22670.63594 22308.93864 29490.74724 32051.51088 23303.91084 38025.75811 31296.35689 1.111164122 0.643371034 0.826150397 0.724385781 0.712828612 0.942306075 1.024129134 0.744620561 1.215021871 1 14.93370711 -6.882796201 6.21326648 0.975572324 0.792144712 0.247789601 0.158039575 0.309297864 15.63754426 0.053383749 0.047091964 1.31E-07 6.882796201 -0.183427612 SFS(ph)ASQSTDR ddPTM_A459_MK2206_30min_R1 1 SFSASQSTDR 10 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 S(0.053)FS(0.936)AS(0.01)QSTDR 110.64 0.0093376 11798000 1526.2 1369.2 1352.3 1321.1 1321.8 1266.4 1562.4 1359.1 1453.3 1600.4 TRUE FALSE 1396.388676 1280.064831 1260.509644 1422.851351 1269.149907 1338.102474 1458.175147 1347.217532 1604.375736 1798.669634 0.776345277 0.71167312 0.700801092 0.791057637 0.705604789 0.743940103 0.810696483 0.74900777 0.891979108 1 10.81271451 -8.525287878 1.04064687 1.002552259 0.738740526 0.83996643 0.035802286 0.20347524 0.48412635 0.033028763 0.01083649 2.98E-09 8.525287878 -0.263811733 SFS(ph)ASQSTDR ddPTM_A459_MK2206_30min_R2 1 SFSASQSTDR 10 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 S(0.037)FS(0.96)AS(0.002)QSTDR 88.803 0.031735 29192000 27888 21900 25858 26339 19310 19781 22866 21191 19130 21239 TRUE FALSE 30023.12672 20812.47785 26720.09281 24187.01945 18551.79238 20533.77982 19863.66673 23960.73646 20793.89282 20545.97317 1.461265742 1.012971139 1.300502663 1.177214593 0.902940553 0.999406533 0.966791233 1.166201098 1.012066581 1 14.32656805 -1.522878745 0.572064188 1.026213812 19.906639 0.496610463 0.117241705 138.9076837 1.184184161 0.056926522 3248.782764 0.03 1.522878745 18.88042519 SFS(ph)DHIR ddPTM_A459_MK2206_30min_R1 1 SFSDHIR 7 0 Q96QB1-6 Q96QB1-6 DLC1 Rho GTPase-activating protein 7 1 SFS(1)DHIR 78.264 0.032378 2061700 1495.6 1080.6 1070.2 1144.1 1571.5 1370.2 1291.9 1207.6 894.04 921.75 TRUE FALSE 1368.391366 1010.252744 997.5578057 1232.21878 1508.903827 1447.77954 1205.719708 1197.042081 986.9786574 1035.943349 1.320913318 0.975200762 0.962946291 1.18946541 1.456550524 1.39754702 1.163885756 1.15550921 0.9527342 1 10.0167294 -8.145584531 3.176850312 0.97434811 1.205450274 0.267814403 0.151298773 0.416029653 7.467965873 0.141478565 0.0454449 7.15E-09 8.145584531 0.231102164 SFS(ph)DHIR ddPTM_A459_MK2206_30min_R2 3 SFSDHIR 7 0 Q96QB1-6 Q96QB1-6 DLC1 Rho GTPase-activating protein 7 1 SFS(1)DHIR;SFS(1)DHIR;SFS(1)DHIR 90.601 0.019471 4308500 38775 56889 47251 54046 61078 54227 51199 38889.5 54638 47244 TRUE FALSE 41743.64381 54063.97498 48826.32476 49630.26892 58679.77083 56290.64648 44476.5098 43972.49118 59390.31448 45702.43215 0.913379045 1.182956189 1.068352874 1.085943714 1.283952912 1.231677262 0.973175993 0.962147726 1.299500085 1 15.47998332 -4.750540898 24.59101987 1.120886584 0.913378496 0.216468331 0.118419358 637.3399454 1437959.083 0.029995069 0.429184356 1.78E-05 4.750540898 -0.207508088 SFS(ph)EDAVTDSSGSGTLPR ddPTM_A459_MK2206_30min_R1 1 SFSEDAVTDSSGSGTLPR 18 0 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2 INF2 Inverted formin-2 1 S(0.005)FS(0.995)EDAVTDSSGSGTLPR 243.99 1.88E-25 6885600 783.64 742.61 891.96 584.92 834.11 784.26 1037.8 861.46 805.6 1095.7 TRUE FALSE 716.9873029 694.265954 831.4162403 629.9706397 800.8856324 828.6641235 968.5702556 853.928346 889.3450029 1231.443588 0.582233169 0.563782183 0.675155767 0.511570847 0.650363232 0.672920897 0.786532379 0.693436836 0.722197112 1 10.26613482 -14.52287875 0.106282458 2.181942774 0.42817168 0.830959562 0.053251946 67.61978338 0.4802477 17.27022668 0.758332963 3.00E-15 14.52287875 -1.753771094 SFS(ph)EDVISHK ddPTM_A459_MK2206_30min_R2 1 SFSEDVISHK 10 0 F8W9J4;Q03001;E9PHM6;F6QMI7;Q03001-8;Q03001-14;H0YC82;Q03001-10;A0A494C1D7 F8W9J4;A0A494C1D7 DST Dystonin 1 S(0.019)FS(0.981)EDVISHK 116.74 0.0041291 4265200 51182 46369 49659 57648 50225 42706 46913 43815 48474 52924 TRUE FALSE 55100.53327 44066.38289 51314.60627 52937.97399 48252.91414 44331.20676 40753.26675 49541.77094 52690.1809 51197.09421 1.076243371 0.86072039 1.002295288 1.034003488 0.942493219 0.865893025 0.796007417 0.967667632 1.029163504 1 15.64377431 -6.511846932 23.88799812 0.919347556 0.984956258 0.104345689 0.080897173 675.5669109 1462859.744 0.026806475 0.028612771 3.08E-07 6.511846932 0.065608702 SFS(ph)EGGER ddPTM_A459_MK2206_30min_R2 2 SFSEGGER 8 0 G3V2D5;G3V515;G3V2P5;Q07352 G3V2D5 ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1" 1 S(0.388)FS(0.612)EGGER;S(0.001)FS(0.999)EGGER 104.42 0.014617 50730000 206118 217290 210953 211040 194005 179596 153678 138118 146672 160376 TRUE FALSE 221898.5526 206499.6946 217986.0677 193797.3569 186387.3889 186430.6516 133499.894 156170.4968 159429.2654 155142.9443 1.430284526 1.331028591 1.405065946 1.249153533 1.201391335 1.201670192 0.860496071 1.006623263 1.027628206 1 17.24323856 -6.630429628 1.020054976 0.972465951 1.38424139 0.847630442 0.070783363 0.190566688 0.427230258 0.037836997 0.039357801 2.34E-07 6.630429628 0.411775439 SFS(ph)ENGDR ddPTM_A459_MK2206_30min_R1 2 SFSENGDR 8 0 P47974 P47974 ZFP36L2 "Zinc finger protein 36, C3H1 type-like 2" 1 S(0.002)FS(0.998)ENGDR;S(0.001)FS(0.999)ENGDR 96.015 0.02142 19335800 6366.7 5845.8 5621.8 4446.4 5932.2 3855.6 5129.9 4797.3 4030.8 4741.7 TRUE FALSE 5825.178732 5465.237357 5240.207879 4788.862498 5695.907912 4073.90074 4787.693731 4755.357712 4449.816084 5329.137594 1.09308094 1.025538797 0.98331255 0.898618663 1.068823578 0.764457789 0.898399346 0.892331569 0.834997409 1 12.37968637 -5.010488788 0.625052211 0.885271497 1.183022433 0.39735441 0.077639304 2.68842035 0.966734813 0.038378922 0.551673293 9.76E-06 5.010488788 0.297750936 SFS(ph)ENGDR ddPTM_A459_MK2206_30min_R2 1 SFSENGDR 8 0 P47974 P47974 ZFP36L2 "Zinc finger protein 36, C3H1 type-like 2" 1 S(0.009)FS(0.991)ENGDR 93.258 0.024315 35120000 84708 72639 87446 87592 81253 87072 77205 74400 55535 71366 TRUE FALSE 91193.30961 69031.85289 90361.406 80435.45341 78062.59896 90385.58597 67067.89076 84124.33545 60365.33392 69037.33326 1.320927465 0.999920617 1.308877411 1.165100817 1.130730219 1.309227656 0.97147279 1.218533965 0.874386815 1 16.07508912 -7.943701676 1.203954033 0.958958287 1.189781373 0.331730479 0.125032219 0.552391829 1.444364252 0.103736967 0.036903218 1.14E-08 7.943701676 0.230823086 SFS(ph)GNPR ddPTM_A459_MK2206_30min_R1 1 SFSGNPR 7 0 Q9NQS3-3 Q9NQS3-3 1 S(0.004)FS(0.996)GNPR 93.143 0.026096 194830000 8142.8 7592.7 8215.1 6586.9 7921.5 7481.1 8157.5 7476.5 4368 5515.4 TRUE FALSE 7450.2121 7098.41385 7657.481901 7094.224179 7605.969881 7904.673417 7613.328059 7411.133749 4822.069231 6198.689391 1.201901181 1.145147531 1.235338862 1.144471635 1.227028715 1.275216892 1.228215769 1.195596888 0.777917545 1 12.5977475 -8.247158455 24.70696134 0.888958798 1.207139079 0.805993947 0.062338409 223.8923397 387350.798 0.040481893 0.015137868 5.66E-09 8.247158455 0.318180282 SFS(ph)LDPLMER ddPTM_A459_MK2206_30min_R1 2 SFSLDPLMER 10 0 Q63HR2-6;Q63HR2;Q63HR2-4;F8VV64;Q63HR2-2 Q63HR2-6 TNS2 Tensin-2 1 S(0.314)FS(0.686)LDPLMER;S(0.02)FS(0.98)LDPLMER 158.56 0.00047333 4474900 4304.9 4283.6 4909.1 4456.4 4866.5 4639.2 5020.5 5011 4216.4 4157.4 TRUE FALSE 3938.745649 4004.736861 4575.88397 4799.6327 4672.657 4901.867495 4685.591605 4967.189355 4654.709869 4672.450099 0.842972224 0.857095694 0.979332871 1.027219681 1.000044281 1.049100021 1.002812552 1.063080236 0.996203227 1 12.18996354 -5.324805811 2.57705862 1.022034172 0.840651841 0.908146495 0.021289089 0.069709982 0.887335161 0.005463104 0.015955101 4.73E-06 5.324805811 -0.181382331 SFS(ph)LEGLTGGAGVGNKPSSSLEVSSANAEELR ddPTM_A459_MK2206_30min_R1 1 SFSLEGLTGGAGVGNKPSSSLEVSSANAEELR 32 1 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;H0YMW2;A0A087WY36;H0YLH1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.033)FS(0.722)LEGLT(0.244)GGAGVGNKPS(0.001)SSLEVSSANAEELR 141.82 1.49E-19 43754000 1217.2 1077.7 1292.7 847.03 952.39 1127.4 1385.6 824.92 1547.5 1676.4 TRUE FALSE 1113.670748 1007.541534 1204.955126 912.2683974 914.4542896 1191.232414 1293.169152 817.7078114 1708.368163 1884.085088 0.591093659 0.534764348 0.6395439 0.484197026 0.485357214 0.632260412 0.686364517 0.434007899 0.906736205 1 10.87964841 -8.385498219 4.921887693 0.992868961 0.564906594 0.810969833 0.076184223 0.087755347 2.934001754 0.072803506 0.01900561 4.12E-09 8.385498219 -0.427962367 SFS(ph)LEGLTGGAGVGNKPSSSLEVSSANAEELR ddPTM_A459_MK2206_30min_R2 3 SFSLEGLTGGAGVGNKPSSSLEVSSANAEELR 32 1 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;H0YMW2;A0A087WY36;H0YLH1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.038)FS(0.496)LEGLT(0.283)GGAGVGNKPS(0.162)S(0.003)S(0.018)LEVSSANAEELR;S(0.053)FS(0.762)LEGLT(0.184)GGAGVGNKPS(0.001)SSLEVSSANAEELR;S(0.23)FS(0.739)LEGLT(0.013)GGAGVGNKPS(0.003)S(0.003)S(0.01)LEVS(0.001)S(0.001)ANAEELR 101.37 2.30E-09 37191000 84350.9 71368.8 76087.1 90694.9 68875 63266.8 90579.8 67939.3 48351.5 90128.5 TRUE FALSE 90808.86976 67824.72917 78623.80594 83284.83655 66170.62143 65674.46241 78686.56345 76819.19978 52557.02607 87187.61443 1.041534057 0.77791702 0.901777236 0.955237015 0.7589452 0.753254494 0.902497034 0.881079271 0.602803809 1 16.41183558 -4.751325576 24.97298018 0.83604136 1.041534482 0.235051735 0.110648862 622.2672038 1536394.858 0.02671356 0.357979493 1.77E-05 4.751325576 0.205493123 SFS(ph)LEGLTGGAGVGNKPSSSLEVSSANAEELRHPFSGEER ddPTM_A459_MK2206_30min_R1 1 SFSLEGLTGGAGVGNKPSSSLEVSSANAEELRHPFSGEER 40 2 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;H0YMW2;A0A087WY36;H0YLH1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.191)FS(0.762)LEGLT(0.039)GGAGVGNKPS(0.002)S(0.002)S(0.002)LEVSSANAEELRHPFSGEER 53.527 0.00016861 24654000 1256.7 1141.6 1010.1 910.34 1403.6 1265.8 1185.2 1238.1 841.86 853.02 TRUE FALSE 1149.811066 1067.281633 941.5372263 980.4545445 1347.69164 1337.468502 1106.137471 1227.275422 929.3743596 958.6985576 1.199345776 1.113260914 0.982099346 1.022693251 1.405751192 1.395087634 1.15379069 1.280147354 0.969412494 1 9.904933451 -4.378956226 17.05269263 1.16232058 11.75280504 0.001376839 0.156632918 14028437.81 23705673.99 0.041429479 5730254193 4.18E-05 4.378956226 10.59048446 SFS(ph)LSWR ddPTM_A459_MK2206_30min_R2 1 SFSLSWR 7 0 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7;A0A3B3IS41 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 1 S(0.061)FS(0.931)LS(0.007)WR 90.601 0.029436 1044000 14466 15915 13647 14251 14561 14190 16448 14139 13811 14527 TRUE FALSE 15573.52808 15124.68424 14101.98417 13086.64771 13989.26198 14730.01039 14288.35784 15987.01585 15012.25582 14052.98518 1.108200705 1.07626131 1.003486732 0.931236143 0.995465504 1.048176612 1.016748944 1.137624187 1.068260987 1 13.778589 -7.670831134 24.52969771 1.077267118 1.022820552 0.10699779 0.054799387 30.24907385 8176.421536 0.027549978 0.01590597 2.13E-08 7.670831134 -0.054446567 SFS(ph)MQDLR ddPTM_A459_MK2206_30min_R1 3 SFSMQDLR 8 0 E5RGS2;Q9H6H4 E5RGS2 REEP4 Receptor expression-enhancing protein;Receptor expression-enhancing protein 4 1 S(0.001)FS(0.999)MQDLR;SFS(1)MQDLR;S(0.017)FS(0.983)MQDLR 145.46 0.0019895 69808000 20862.7 17701 18270.9 15464 18844.8 16594.2 18094.6 15987.2 18199.5 15167.8 TRUE FALSE 19088.21781 16548.66168 17030.72221 16655.03996 18094.17171 17533.74926 16887.54225 15847.4256 20091.40315 17046.90158 1.119747054 0.970772408 0.999050891 0.977012737 1.061434633 1.028559307 0.990651713 0.929636716 1.178595598 1 14.05722192 -8.256966033 24.99780754 1.089297794 1.008602605 0.200163581 0.063693727 536.4384554 2997745.126 0.044113577 0.015346899 5.53E-09 8.256966033 -0.08069519 SFS(ph)MQDLR ddPTM_A459_MK2206_30min_R2 4 SFSMQDLR 8 0 E5RGS2;Q9H6H4 E5RGS2 REEP4 Receptor expression-enhancing protein;Receptor expression-enhancing protein 4 1 S(0.064)FS(0.936)MQDLR;S(0.007)FS(0.993)MQDLR;S(0.002)FS(0.998)MQDLR;S(0.001)FS(0.999)MQDLR 107.11 0.01344 66125500 180816 184994 151203 204838 202315 197793 256437 188789 154341 189889 TRUE FALSE 194659.412 175807.467 156244.0326 188102.0802 194371.0965 205320.1512 222766.5139 213464.3705 167765.3012 183692.9375 1.059700033 0.957072544 0.8505718 1.024002788 1.058130482 1.117735685 1.21271137 1.162071735 0.91329206 1 17.48693663 -6.174397702 2.797879141 1.096436618 0.955096524 0.238520659 0.092334283 0.346122381 5.287146222 0.030019392 0.040001169 6.69E-07 6.174397702 -0.141340094 SFS(ph)PLQPGQAPTGR ddPTM_A459_MK2206_30min_R1 1 SFSPLQPGQAPTGR 14 0 Q7Z3C6;H7C152;Q7Z3C6-2;H7C1G6 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 S(0.058)FS(0.942)PLQPGQAPT(0.001)GR 119.47 0.0022071 11624000 1237.2 996.13 1026.2 1173.6 1304.2 1376.2 1296.7 1354.5 1144.1 1030.7 TRUE FALSE 1131.969643 931.2817559 956.5444032 1263.990875 1252.250952 1454.119255 1210.199509 1342.657749 1263.033289 1158.390897 0.977191418 0.803944297 0.825752693 1.091160918 1.081026237 1.25529237 1.044724636 1.159071391 1.090334266 1 10.17790646 -5.79552605 7.005324803 1.113590906 0.862368376 0.656708573 0.077296515 0.098575584 14.70786469 0.021023347 0.031993587 1.60E-06 5.79552605 -0.25122253 SFS(ph)PLQPGQAPTGR ddPTM_A459_MK2206_30min_R2 1 SFSPLQPGQAPTGR 14 0 Q7Z3C6;H7C152;Q7Z3C6-2;H7C1G6 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 S(0.013)FS(0.987)PLQPGQAPTGR 135.61 0.00060186 14298000 12464 16118 16491 17275 17789 16090 17372 14568 12407 12680 TRUE FALSE 13418.25342 15317.60356 17040.80171 15863.57724 17090.51448 16702.31622 15091.03553 16472.08762 13486.13843 12266.25264 1.093916277 1.24875983 1.389242682 1.293270056 1.39329549 1.361647825 1.230288987 1.342878555 1.099450568 1 13.58240695 -8.424207983 3.583016706 1.002256745 1.299048364 0.576525071 0.08548881 0.156883632 3.609620347 0.084456731 0.022359653 3.77E-09 8.424207983 0.296791619 SFS(ph)SSAEEHS ddPTM_A459_MK2206_30min_R1 1 SFSSSAEEHS 10 0 Q96EQ0 Q96EQ0 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta 1 S(0.086)FS(0.631)S(0.141)S(0.141)AEEHS 106.2 0.012047 15960000 5963 5028.1 4837.1 3836.9 4866.1 3521.5 3959.5 3719 3046.5 2496.5 TRUE FALSE 5455.815537 4700.769776 4508.771129 4132.418703 4672.272933 3720.884287 3695.36898 3686.485175 3363.194577 2805.785268 1.944487912 1.675384724 1.606955165 1.472820729 1.665228265 1.326147204 1.317053383 1.313887138 1.19866428 1 11.45418889 -1.522878745 0.132453316 0.852817971 4.325214414 0.899969476 0.082714713 23.73473945 0.212730592 0.422195259 15.4343222 0.03 1.522878745 3.472396443 SFS(ph)SSAEEHS ddPTM_A459_MK2206_30min_R2 1 SFSSSAEEHS 10 0 Q96EQ0 Q96EQ0 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta 1 S(0.051)FS(0.946)S(0.002)S(0.002)AEEHS 179.81 0.00011417 32667000 146510 203180 143040 165330 141520 138740 118660 90408 105420 91065 TRUE FALSE 157726.9182 193090.3767 147808.8822 151822.0101 135963.2137 144019.8479 103079.7995 102224.636 114589.241 88093.55651 1.790447843 2.191878547 1.677862582 1.723417877 1.543395671 1.634851102 1.170117356 1.16040991 1.300767566 1 16.42674888 -6.649013965 0.468372818 1.030851317 2.067918649 0.815051611 0.147402149 0.475635967 0.21660954 0.133717338 0.211211383 2.24E-07 6.649013965 1.037067332 SFS(ph)TTSASSQK ddPTM_A459_MK2206_30min_R1 1 SFSTTSASSQK 11 0 B5MCH3;Q8N3C7;Q8N3C7-3;Q8N3C7-2 B5MCH3 CLIP4 CAP-Gly domain-containing linker protein 4 1 S(0.244)FS(0.361)T(0.361)T(0.011)S(0.022)ASSQK 125.82 0.0032771 2580500 1128.7 1414.7 1469.7 1358.8 1459.4 1072.2 1279.3 1127.5 1272.6 1141.3 TRUE FALSE 1032.698138 1322.602773 1369.940859 1463.455011 1401.269008 1132.907037 1193.960231 1117.642386 1404.891324 1282.69286 0.80510165 1.031114161 1.0680194 1.140923955 1.092443133 0.883225496 0.930823167 0.871325023 1.095267127 1 10.32496004 -6.758682938 24.99686249 0.946504417 1.03627024 0.103112326 0.101722915 147.7187158 1339591.917 0.03538801 0.033887165 1.74E-07 6.758682938 0.089765823 SFSEDAVT(ph)DSSGSGTLPR ddPTM_A459_MK2206_30min_R1 1 SFSEDAVTDSSGSGTLPR 18 0 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2 INF2 Inverted formin-2 1 S(0.187)FS(0.294)EDAVT(0.504)DS(0.014)S(0.001)GSGTLPR 201.4 5.96E-22 0 519.1 469.68 680.36 372.64 494.9 457.16 514.81 378.51 581.09 575.93 TRUE FALSE 474.9478191 439.1037466 634.1790588 401.3407974 475.187085 483.0440041 480.4679642 375.200727 641.496385 647.2805564 0.733758823 0.678382414 0.979759167 0.620041485 0.734128471 0.746266823 0.742287034 0.579657033 0.991063888 1 9.338247357 -8.286643155 23.44713 0.995532344 0.731456983 0.534929283 0.100158132 309.2154378 287657.9392 0.0936743 0.024241766 5.17E-09 8.286643155 -0.264075361 SFSEDAVT(ph)DSSGSGTLPR ddPTM_A459_MK2206_30min_R2 3 SFSEDAVTDSSGSGTLPR 18 0 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2 INF2 Inverted formin-2 1 SFSEDAVT(0.64)DS(0.223)S(0.079)GS(0.056)GT(0.002)LPR;SFSEDAVT(0.417)DS(0.192)S(0.192)GS(0.192)GT(0.007)LPR;SFSEDAVT(0.967)DS(0.027)S(0.006)GSGTLPR 335.98 1.65E-144 46332000 108161 109125 90579 118213 111358 119303 94372 79405 93500 94840 TRUE FALSE 116441.8893 103706.0112 93598.85865 108554.6198 106985.5254 123843.1593 81980.84304 89783.50614 101632.461 91745.37857 1.269185338 1.130367685 1.020202435 1.183216217 1.16611351 1.349857194 0.893569184 0.978616117 1.107766545 1 16.48534787 -7.276634117 24.99676341 0.993205977 1.175305781 0.495560069 0.09424213 781.241437 1285210.309 0.040856126 0.02765556 5.29E-08 7.276634117 0.182099804 SFSEDAVTDS(ph)SGSGTLPR ddPTM_A459_MK2206_30min_R1 1 SFSEDAVTDSSGSGTLPR 18 0 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2 INF2 Inverted formin-2 1 SFSEDAVTDS(0.511)S(0.035)GS(0.432)GT(0.021)LPR 317.31 7.32E-127 24385000 1706 1666.7 1573 1200.4 1408.7 1411.8 1695.8 1268.4 1227.8 944.63 TRUE FALSE 1560.895741 1558.197527 1466.229143 1292.855016 1352.588496 1491.734896 1582.676276 1257.310513 1355.434204 1061.657896 1.470243614 1.467702103 1.381074966 1.217769887 1.274034226 1.405099422 1.4907592 1.184289701 1.276714664 1 10.05210324 -13.85585965 0.136677646 3.73E-13 1.492293036 0.608192009 0.092773125 87.45575922 0.875516841 24.48576652 0.696780495 1.39E-14 13.85585965 1.492293036 SFSEDAVTDSSGS(ph)GTLPR ddPTM_A459_MK2206_30min_R1 1 SFSEDAVTDSSGSGTLPR 18 0 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2 INF2 Inverted formin-2 1 SFSEDAVT(0.007)DS(0.056)S(0.056)GS(0.824)GT(0.056)LPR 354.96 4.41E-184 22581000 2455.1 1787.3 1848 1588.1 1950 1876.5 2192 1927.5 1807.1 1539.3 TRUE FALSE 2246.280853 1670.946445 1722.562909 1710.415737 1872.327371 1982.745808 2045.77568 1910.648071 1994.954512 1730.000105 1.29842816 0.965864939 0.995701043 0.988679557 1.082270091 1.146095773 1.182529223 1.104420783 1.153152827 1 10.75655641 -6.554913355 5.940050115 1.126976404 1.048681997 0.055047513 0.098197563 0.392723355 39.91729894 0.031948326 0.032428134 2.79E-07 6.554913355 -0.078294407 SFSEDAVTDSSGS(ph)GTLPR ddPTM_A459_MK2206_30min_R2 1 SFSEDAVTDSSGSGTLPR 18 0 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2 INF2 Inverted formin-2 1 SFSEDAVTDSSGS(0.499)GT(0.499)LPR 286.85 1.43E-80 12922000 29123 24406 26230 28547 26701 25493 23205 17585 22048 20492 TRUE FALSE 31352.67927 23194.03353 27104.49511 26214.61878 25652.58458 26463.15398 20158.15563 19883.41988 23965.69519 19823.34772 1.581603658 1.170036154 1.367301603 1.322411288 1.294059154 1.334948786 1.016889574 1.003030374 1.208963064 1 14.274913 -7.256199843 24.32715255 1.057473277 1.334767749 0.619391492 0.110361328 199.958361 928409.2889 0.040759482 0.030590543 5.54E-08 7.256199843 0.277294472 SFSEDAVTDSSGSGT(ph)LPR ddPTM_A459_MK2206_30min_R1 2 SFSEDAVTDSSGSGTLPR 18 0 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2 INF2 Inverted formin-2 1 SFSEDAVTDSSGS(0.035)GT(0.964)LPR;SFSEDAVTDSSGS(0.001)GT(0.999)LPR 376.67 1.50E-230 22917000 6740.1 6294.6 5744.5 4647 6340.9 5118.9 5787.9 5314 5121.4 5117.5 TRUE FALSE 6166.819101 5884.820396 5354.579345 5004.912745 6088.328526 5408.727694 5401.799752 5267.540258 5653.787857 5751.494535 1.07221159 1.023181081 0.930989209 0.870193428 1.058564602 0.940403866 0.939199319 0.915855909 0.98301195 1 12.48972118 -5.057579994 3.612793113 0.951683998 1.065975793 0.385556942 0.048520405 0.223116305 5.660609703 0.01253123 0.046033785 8.76E-06 5.057579994 0.114291795 SFSEDT(ph)LMDGPAR ddPTM_A459_MK2206_30min_R1 1 SFSEDTLMDGPAR 13 0 Q9BRG2;M0QZQ6 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 S(0.168)FS(0.002)EDT(0.83)LMDGPAR 281.32 2.98E-48 16613000 1382 1935.9 1961.6 1947.1 2055 1804.2 2023.4 1948 1746.5 1619.4 TRUE FALSE 1264.453643 1809.872558 1828.452057 2097.065979 1973.144998 1906.352245 1888.422678 1930.968841 1928.054925 1820.023498 0.694745779 0.994422633 1.004631017 1.152219178 1.084131606 1.047432765 1.037581482 1.060958193 1.059357161 1 10.82974136 -4.540961283 1.750924291 1.062579778 0.349683142 0.87578823 0.040575794 0.611184463 1.12184916 0.011237023 0.888719196 2.88E-05 4.540961283 -0.712896636 SFSEDT(ph)LMDGPAR ddPTM_A459_MK2206_30min_R2 1 SFSEDTLMDGPAR 13 0 Q9BRG2;M0QZQ6 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 SFS(0.001)EDT(0.999)LMDGPAR 117.27 0.037175 4263800 14775 19862 15398 18710 17889 16725 18915 14160 15399 15051 TRUE FALSE 15906.18536 18875.68196 15911.36163 17181.33315 17186.58797 17361.48159 16431.43778 16010.76062 16738.37718 14559.8871 1.092466257 1.296416781 1.092821773 1.180045767 1.180406679 1.192418696 1.128541565 1.099648679 1.149622732 1 13.82971155 -9.423722691 0.381863329 0.972541361 1.180946452 0.424023749 0.056981673 3.697888455 0.78531137 0.217798717 0.041618995 3.77E-10 9.423722691 0.208405091 SFSKEELMS(ph)SDLEETAGSTSIPK ddPTM_A459_MK2206_30min_R1 2 SFSKEELMSSDLEETAGSTSIPK 23 1 O00567 O00567 NOP56 Nucleolar protein 56 1 S(0.005)FS(0.005)KEELMS(0.493)S(0.493)DLEET(0.002)AGS(0.001)TSIPK;SFSKEELMS(0.493)S(0.493)DLEET(0.009)AGS(0.002)T(0.002)S(0.001)IPK 70.572 0.0044318 37898000 6742.1 7412.9 7664.7 8238.2 6996.8 6428.7 5346.3 6319.9 4623.1 2535.16 TRUE FALSE 6168.648991 6930.318863 7144.441519 8872.707591 6718.10264 6792.687438 4989.658082 6264.645781 5103.687789 2849.23476 2.165019561 2.432343926 2.507494861 3.114066877 2.357862095 2.384039228 1.751227435 2.198711692 1.791248605 1 11.47635878 -8.473006225 0.534753669 0.988019415 2.554878491 0.72254743 0.280888321 0.533010838 0.372580887 0.33103312 0.156438649 3.37E-09 8.473006225 1.566859075 SFSKEELMSS(ph)DLEETAGSTSIPK ddPTM_A459_MK2206_30min_R1 2 SFSKEELMSSDLEETAGSTSIPK 23 1 O00567 O00567 NOP56 Nucleolar protein 56 1 SFSKEELMS(0.447)S(0.549)DLEET(0.003)AGS(0.001)TSIPK;SFSKEELMS(0.174)S(0.826)DLEETAGSTSIPK 133.91 3.48E-06 250127000 11589.1 13088.6 12465.1 12207.8 12838.1 12080.5 10316.5 12725 7651.3 4268.3 TRUE FALSE 10603.38619 12236.52976 11619.00374 13148.04687 12326.73129 12764.48747 9628.305109 12613.74667 8446.680015 4797.089228 2.210379187 2.550823881 2.422094564 2.740838506 2.569627269 2.660881811 2.007114033 2.629458421 1.760792767 1 12.22794356 -8.528329091 2.728848077 1.000937314 2.479024551 0.828853638 0.212486577 0.097742018 1.769559196 0.201209219 0.054151448 2.96E-09 8.528329091 1.478087237 SFSKEELMSS(ph)DLEETAGSTSIPK ddPTM_A459_MK2206_30min_R2 4 SFSKEELMSSDLEETAGSTSIPK 23 1 O00567 O00567 NOP56 Nucleolar protein 56 1 SFSKEELMS(0.436)S(0.561)DLEET(0.002)AGS(0.001)TSIPK;SFSKEELMS(0.046)S(0.948)DLEET(0.005)AGSTSIPK;SFSKEELMS(0.39)S(0.61)DLEETAGSTSIPK;SFSKEELMS(0.152)S(0.848)DLEETAGSTSIPK 100.9 2.45E-05 32630900 159911 353307 266038 344149 366899 303948 352482 264476 312797 266522 TRUE FALSE 172153.9091 335762.2881 274907.5741 316030.9258 352492.7017 315514.9541 306200.69 299043.9213 340003.5177 257825.409 0.667715063 1.302285486 1.066254778 1.225755549 1.367175963 1.223754305 1.187628059 1.159869861 1.318735492 1 17.97603492 -4.755624081 24.9992104 1.212025543 0.667714184 0.696326095 0.106513415 101.3388357 435598.576 0.025347274 0.220883925 1.76E-05 4.755624081 -0.544311358 SFSLASSSNS(ph)PISQR ddPTM_A459_MK2206_30min_R1 4 SFSLASSSNSPISQR 15 0 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 SFSLASSSNS(1)PISQR;SFSLAS(0.003)S(0.006)S(0.001)NS(0.99)PISQR;SFSLASSSNS(0.999)PISQR;SFSLASSSNS(1)PISQR 305.19 3.90E-197 144620000 12722.5 12361.2 12854.2 9961.6 14008.6 11512 13842.5 12451.8 10577 10527.2 TRUE FALSE 11640.38457 11556.48363 11981.69272 10728.84416 13450.6078 12163.79949 12919.09208 12342.93523 11676.517 11831.38901 0.983856127 0.976764742 1.012703809 0.906811884 1.136857877 1.028095643 1.091933675 1.043236362 0.986910074 1 13.53033184 -6.252815678 24.99997027 1.05121833 0.973562736 0.390911147 0.047384623 674.8392679 1956346.59 0.013657861 0.017360812 5.59E-07 6.252815678 -0.077655593 SFSLASSSNS(ph)PISQR ddPTM_A459_MK2206_30min_R2 4 SFSLASSSNSPISQR 15 0 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 SFSLASSSNS(0.999)PIS(0.001)QR;SFSLASSSNS(1)PISQR;SFSLAS(0.141)S(0.141)S(0.031)NS(0.688)PISQR;SFSLASSSNS(1)PISQR 281.49 2.89E-55 263403000 279963 394103 337689 399422 365818 397688 357459 279404 378209 347542 TRUE FALSE 301397.1825 374532.4181 348947.3827 366787.9449 351454.1472 412822.2955 310524.2039 315923.0621 411104.9352 336201.733 0.896477183 1.114010968 1.03791072 1.090975771 1.045366852 1.227900558 0.923624638 0.939683027 1.222792433 1 18.35896764 -4.750848194 24.72542798 1.064758013 0.896476776 0.214559036 0.097752944 636.6739751 1486220.824 0.023801676 0.329965315 1.77E-05 4.750848194 -0.168281237 SFSLEGLT(ph)GGAGVGNKPSSSLEVSSANAEELR ddPTM_A459_MK2206_30min_R1 1 SFSLEGLTGGAGVGNKPSSSLEVSSANAEELR 32 1 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;H0YMW2;A0A087WY36;H0YLH1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.001)FS(0.009)LEGLT(0.95)GGAGVGNKPS(0.032)S(0.003)S(0.005)LEVSSANAEELR 119.46 1.58E-16 41572000 2807.5 2603.4 2776.3 1618.7 2409 2852.6 2760.1 2059.8 3464.8 3746.2 TRUE FALSE 2568.707382 2433.918187 2587.852491 1743.372554 2313.044429 3014.111747 2575.978765 2041.791386 3824.978359 4210.307538 0.610099704 0.578085606 0.614646903 0.414072497 0.549376597 0.715888737 0.611826747 0.484950652 0.908479565 1 12.0397099 -8.369132022 4.592784754 0.991250349 0.574470508 0.795766107 0.077769549 0.098371504 3.139645795 0.0781577 0.020518341 4.27E-09 8.369132022 -0.416779841 SFSS(ph)PENFQR ddPTM_A459_MK2206_30min_R2 3 SFSSPENFQR 10 0 G3V1T9;J3KPD3;Q9Y580;I3L521;F5GXV8;F5GY08 G3V1T9 RBM7 RNA-binding protein 7 1 SFS(0.133)S(0.867)PENFQR;S(0.001)FS(0.05)S(0.949)PENFQR;S(0.004)FS(0.03)S(0.966)PENFQR 136.5 0.0018488 35000900 129227 121460 117230 143384 117232 135295 138122 100671 114482 133196 TRUE FALSE 139120.7185 115428.473 121138.3897 131669.0685 112628.8826 140443.746 119986.4155 113829.0454 124439.4374 128849.8254 1.079712122 0.895837248 0.940151756 1.021880069 0.874109703 1.089980103 0.931211316 0.883424133 0.965771098 1 16.97533106 SFSY(ph)S(ph)S(ph)LLSQHKR ddPTM_A459_MK2206_30min_R1 1 SFSYSSLLSQHKR 13 1 Q8NB50-2;Q8NB50-3;Q8NB50 Q8NB50-2 ZFP62 Zinc finger protein 62 homolog 3 S(0.001)FS(0.435)Y(0.565)S(0.997)S(0.997)LLS(0.005)QHKR 78.324 0.043666 17730000 145.54 218.21 160.61 133.93 161.36 207.88 127.72 149.57 122.79 0 TRUE FALSE 133.1610587 204.0044893 149.7082407 144.2453118 154.9326895 219.649986 119.2000318 148.2623253 135.5544599 0 0 SFT(ph)FGAYGGVDK ddPTM_A459_MK2206_30min_R1 1 SFTFGAYGGVDK 12 0 P47736-4 P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 S(0.001)FT(0.999)FGAYGGVDK 142.38 0.0021357 5217400 421.16 592.23 595.56 655.08 1212.7 1246.1 1833.1 2014.3 1664.9 1606.2 TRUE FALSE 385.3381304 553.6757194 555.1350465 705.5343751 1164.395591 1316.653105 1710.817244 1996.689187 1837.972313 1805.188182 0.213461474 0.306713574 0.307521981 0.390837023 0.645027262 0.729371662 0.947722382 1.10608368 1.01816106 1 10.81793352 -6.666353681 0.893715593 1.065525613 0.245498454 0.978047184 0.048037564 0.075127723 0.131255133 0.028878281 0.029677223 2.16E-07 6.666353681 -0.820027159 down SFT(ph)PDHVVYAR ddPTM_A459_MK2206_30min_R1 4 SFTPDHVVYAR 11 0 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 SFT(1)PDHVVYAR;S(0.021)FT(0.979)PDHVVYAR;S(0.099)FT(0.901)PDHVVYAR;S(0.011)FT(0.989)PDHVVYAR 131.13 0.0030659 63203000 32474.6 24317.61 22978.06 19033.4 23883.8 22634.44 24340.2 20171.99 20466.99 20367.96 TRUE FALSE 29712.46474 22734.52917 21418.37331 20499.35577 22932.45767 23915.98243 22716.50967 19995.62842 22594.60685 22891.29666 1.297980852 0.993151655 0.935655749 0.89550872 1.001798108 1.044763116 0.992364479 0.873503529 0.987039188 1 14.48251156 -4.762410943 4.523119401 0.96419678 1.32547345 0.801219356 0.049262766 0.090350203 4.110993669 0.013138129 0.106485056 1.73E-05 4.762410943 0.36127667 SFT(ph)PDHVVYAR ddPTM_A459_MK2206_30min_R2 2 SFTPDHVVYAR 11 0 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 S(0.125)FT(0.875)PDHVVYAR;S(0.007)FT(0.993)PDHVVYAR 134.18 0.0022751 39099200 214531 175221 137051 159802 182566 165024 190994 144961 117408 155180 TRUE FALSE 230955.6583 166519.7799 141620.2119 146745.6654 175397.5415 171304.104 165916.2584 163907.9004 127619.9356 150116.4893 1.538509589 1.109270412 0.943402105 0.977545279 1.168409562 1.141141155 1.105250057 1.091871394 0.850139356 1 17.19572293 -4.769700543 4.120460933 1.045795355 1.585227422 0.724494619 0.092450997 0.125640685 4.170299966 0.024300709 0.2045516 1.70E-05 4.769700543 0.539432068 SFTETMSSLS(ph)PGKPWQTK ddPTM_A459_MK2206_30min_R2 1 SFTETMSSLSPGKPWQTK 18 1 F8VQQ3;Q9HB07 F8VQQ3 C12orf10 "UPF0160 protein MYG1, mitochondrial" 1 SFTET(0.003)MS(0.056)S(0.056)LS(0.884)PGKPWQTK 71.853 0.011513 2570400 4319.2 6277.8 6650.2 6923.4 7210.6 6837.3 4871.3 4337.6 5059.8 7498.9 TRUE FALSE 4649.881273 5966.053581 6871.914349 6357.736073 6927.475614 7097.498243 4231.692459 4904.539213 5499.892258 7254.211507 0.640990584 0.822426197 0.947299971 0.876420003 0.954959144 0.978396926 0.583342856 0.676095425 0.758165412 1 12.82460309 -7.251461842 24.88794275 0.72740887 0.875571986 0.139840942 0.133609064 1024.453306 2555397.817 0.051640754 0.039499431 5.60E-08 7.251461842 0.148163116 SFTPDHVVY(ph)AR ddPTM_A459_MK2206_30min_R2 1 SFTPDHVVYAR 11 0 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 SFTPDHVVY(1)AR 120.06 0.0074564 0 14433 18518 13932 18748 19013 20523 18939 14234 18334 17565 TRUE FALSE 15538.00158 17598.42305 14396.48593 17216.22843 18266.45409 21304.01715 16452.28655 16094.43267 19928.65818 16991.85549 0.91443819 1.035697547 0.847258025 1.013204734 1.075012326 1.25377815 0.968245437 0.94718512 1.172835903 1 14.05255578 -5.995154446 24.17235323 1.068572582 0.940695099 0.286759373 0.096520175 125.9962719 628522.2921 0.027773062 0.04101359 1.01E-06 5.995154446 -0.127877483 SFVT(ph)PPQSHFVR ddPTM_A459_MK2206_30min_R2 2 SFVTPPQSHFVR 12 0 H0YNU5;A0A3B3IT82;P54132;H0YLV8 H0YNU5 BLM Bloom syndrome protein 1 S(0.003)FVT(0.997)PPQSHFVR;SFVT(1)PPQSHFVR 112.02 0.0088829 9384400 57287 49480 48783 62182 60602 69078 68485 48873 51907 69726 TRUE FALSE 61672.93677 47022.89515 50409.40087 57101.53169 58222.46098 71706.8117 59492.83723 55260.86891 56421.77703 67450.84633 0.914338961 0.697143145 0.747350161 0.846565088 0.86318355 1.063097286 0.882017654 0.819276138 0.83648731 1 16.04154892 -6.108391294 2.644376769 0.908641823 0.779308607 0.294524887 0.086237831 0.368903912 5.029282328 0.028105177 0.03926376 7.79E-07 6.108391294 -0.129333216 SFYPEEVS(ph)SMVLTK ddPTM_A459_MK2206_30min_R1 1 SFYPEEVSSMVLTK 14 0 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PI65;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 SFYPEEVS(0.931)S(0.066)MVLT(0.004)K 101.75 0.0080686 10159000 2706.7 2725.8 2558.3 2390.9 2616.8 2757.3 2807.3 2625.5 2188.2 2038.2 TRUE FALSE 2476.480952 2548.349925 2384.649724 2575.047532 2512.567315 2913.415943 2620.030139 2602.54553 2415.671221 2290.707604 1.081098673 1.11247281 1.041010088 1.124127553 1.096852043 1.271841041 1.143764545 1.136131703 1.054552408 1 11.1615776 -5.923820404 10.28573884 1.131015606 1.081608542 0.045228903 0.068411094 0.993862822 127.180812 0.019343509 0.028718185 1.19E-06 5.923820404 -0.049407064 SFYPEEVSS(ph)MVLTK ddPTM_A459_MK2206_30min_R2 1 SFYPEEVSSMVLTK 14 0 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PI65;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 SFYPEEVS(0.275)S(0.696)MVLT(0.029)K 159.41 2.78E-05 0 9305.8 12279 8437.8 10478 7532.1 9342.9 11574 9981.1 8333.5 9700.4 TRUE FALSE 10018.2592 11669.24272 8719.112041 9621.913883 7236.351908 9698.450606 10054.3199 11285.66404 9058.332766 9383.876742 1.067603452 1.243541772 0.929158841 1.02536661 0.771147374 1.033522804 1.071446287 1.202665418 0.965308157 1 13.19596835 -5.264547866 24.98679568 1.00357125 1.155572611 0.240620474 0.1105123 383.4325525 3082154.473 0.030351671 0.067800959 5.44E-06 5.264547866 0.152001361 SFYPEEVSSMVLTK ddPTM_A459_MK2206_30min_R1 2 SFYPEEVSSMVLTK 14 0 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PI65;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ; 171.26 0.0019987 25702000 5331.1 5921.5 6325.2 6165.2 6136.8 5565.4 5756.3 5618.5 4863.8 4834.6 FALSE TRUE 4877.66195 5536.009274 5895.863047 6640.044772 5892.358261 5880.508138 5372.30773 5569.378047 5369.409415 5433.546747 0.897693933 1.018857393 1.085085547 1.22204613 1.08444052 1.082259602 0.988729458 1.024998644 0.988196047 1 12.40767851 -7.259691923 24.83057258 1.002564257 1.071889954 0.145487859 0.075531767 301.682274 4286794.014 0.032715279 0.024059613 5.50E-08 7.259691923 0.069325696 SGAAQPGAGGAQPGAAQPSR ddPTM_A459_MK2206_30min_R1 1 SGAAQPGAGGAQPGAAQPSR 20 0 Q5T8A7 Q5T8A7 PPP1R26 Protein phosphatase 1 regulatory subunit 26 0 60.938 0.039146 6938000 2008.8 1661.2 1948 1860.6 2741.9 2054.5 2529.1 2227.3 1637.8 1475.7 FALSE TRUE 1837.941011 1553.055578 1815.775187 2003.903734 2632.684317 2170.824015 2360.388354 2207.826951 1808.055171 1658.520857 1.108180825 0.936410038 1.09481601 1.208247533 1.587368833 1.308891598 1.423188827 1.331202403 1.09016125 1 10.69568144 -5.809658173 3.229803746 1.319081358 1.02675359 0.303366477 0.160387413 0.248655883 5.282373454 0.045573202 0.075839384 1.55E-06 5.809658173 -0.292327768 SGAASMPS(ph)SPK ddPTM_A459_MK2206_30min_R2 1 SGAASMPSSPK 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 SGAASMPS(0.923)S(0.077)PK 174.23 0.00014431 98326000 162250 162790 172210 140220 154670 101720 214970 171340 140200 186220 TRUE FALSE 174671.9847 154706.0853 177951.3954 128763.5775 148596.8786 105591.0259 186744.1808 193734.7263 152394.3426 180143.6567 0.969626064 0.858792856 0.987830484 0.714782745 0.824879884 0.586149009 1.036640336 1.07544573 0.845960082 1 17.45878833 -10.95542822 7.77185489 1.000004822 0.876024783 0.06265633 0.141658522 1.24E-05 9.05E-07 0.14370202 0.034851504 1.11E-11 10.95542822 -0.123980039 SGAASMPSS(ph)PK ddPTM_A459_MK2206_30min_R1 1 SGAASMPSSPK 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 SGAASMPS(0.23)S(0.77)PK 115.33 0.023557 4529700 3093.4 3607.1 3964.6 3792.2 2986.2 2154 3138.6 3137.7 3983.6 3092.8 TRUE FALSE 2830.290086 3372.277134 3695.493998 4084.275901 2867.253331 2275.957619 2929.229721 3110.26742 4397.709475 3475.959413 0.814247162 0.970171608 1.063157983 1.175006787 0.824881131 0.654771057 0.84271114 0.89479394 1.265178603 1 11.76319552 -8.239917211 23.86547032 1.1325893 0.908330713 0.274674636 0.147874607 570.930877 633095.9813 0.110271039 0.04157603 5.76E-09 8.239917211 -0.224258587 SGAASMPSS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SGAASMPSSPK 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 SGAASMPS(0.019)S(0.981)PK;SGAASMPS(0.039)S(0.961)PK 146.5 0.000683 118750000 420970 390440 395930 309690 371100 218598 471390 389510 324400 442150 TRUE FALSE 453199.7869 371051.3174 409130.1086 284387.3364 356528.7494 226916.9001 409495.9268 440420.2944 352615.7256 427722.6817 1.059564541 0.867504421 0.956531243 0.6648872 0.833551188 0.53052342 0.957386513 1.029686554 0.824402681 1 18.70631619 -9.800008154 11.46727122 1.000005888 0.853299524 0.070323406 0.153707173 0 0 0.153738396 0.037287038 1.58E-10 9.800008154 -0.146706364 SGAHS(ph)SASPPR ddPTM_A459_MK2206_30min_R1 1 SGAHSSASPPR 11 0 P18615;P18615-3;A0A0A0MT02;P18615-4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 NELFE Negative elongation factor E 1 S(0.018)GAHS(0.898)S(0.042)AS(0.042)PPR 79.089 0.030657 3438400 0 0 0 0 113.46 0 0 0 0 0 TRUE FALSE 0 0 0 0 108.9406479 0 0 0 0 0 0 SGAHS(ph)SASPPR ddPTM_A459_MK2206_30min_R2 1 SGAHSSASPPR 11 0 P18615;P18615-3;A0A0A0MT02;P18615-4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 NELFE Negative elongation factor E 1 S(0.004)GAHS(0.87)S(0.079)AS(0.046)PPR 75.89 0.034674 11697000 3068.3 3128.7 1166.4 2735.7 3119.2 3456.1 1064.6 1502.4 3201.4 2336.4 TRUE FALSE 3303.211407 2973.333308 1205.287194 2512.184559 2996.724535 3587.624307 924.8167412 1698.768839 3479.851985 2260.163459 1.461492262 1.315539058 0.533274347 1.111505696 1.32588841 1.587329577 0.409181353 0.751613266 1.539646157 1 11.1422114 -5.017580611 23.94213374 1.02698826 1.425004394 0.1335104 0.371027617 757.1044443 1031077.685 0.097235179 0.271192213 9.60E-06 5.017580611 0.398016135 SGAHSSAS(ph)PPR ddPTM_A459_MK2206_30min_R1 2 SGAHSSASPPR 11 0 P18615;P18615-3;A0A0A0MT02;P18615-4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 NELFE Negative elongation factor E 1 SGAHSS(0.002)AS(0.998)PPR;SGAHS(0.03)S(0.03)AS(0.94)PPR 159.44 0.00058635 12861460 1930.34 1077.2 744.55 747.54 1830.27 2191.37 2831.14 2045.87 243.746 686.77 TRUE FALSE 1766.154446 1007.074084 694.0120204 805.1156603 1757.36647 2315.443476 2642.279816 2027.983174 269.084269 771.8522524 2.28820275 1.304749816 0.899151383 1.043095564 2.276817182 2.999853234 3.423297409 2.627424054 0.348621473 1 9.592180904 -6.275304705 22.25649055 2.303931068 1.343535763 0.109310006 0.924542347 318.2789631 510896.4266 0.295651151 0.33759083 5.31E-07 6.275304705 -0.960395305 SGAHSSAS(ph)PPR ddPTM_A459_MK2206_30min_R2 2 SGAHSSASPPR 11 0 P18615;P18615-3;A0A0A0MT02;P18615-4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 NELFE Negative elongation factor E 1 SGAHSSAS(0.999)PPR;SGAHSSAS(1)PPR 168.85 0.00045552 111001000 5242.9 25152 15658.8 50245 48663 69588 37322 23867 55256 21320 TRUE FALSE 5644.300455 23902.98825 16180.85658 46139.82277 46752.24611 72236.2201 32421.57657 26986.49885 60062.067 20624.33015 0.273671941 1.158970405 0.78455186 2.237154974 2.266849191 3.502475939 1.572006283 1.308478804 2.9121948 1 14.33205964 -5.759621014 24.80572996 2.168637188 0.781054922 0.430988128 0.721676368 41.0434457 559883.9986 0.199553931 0.32415027 1.74E-06 5.759621014 -1.387582266 SGAMS(ph)PMSWNSDASTSEAS ddPTM_A459_MK2206_30min_R1 2 SGAMSPMSWNSDASTSEAS 19 0 Q13158 Q13158 FADD FAS-associated death domain protein 1 S(0.035)GAMS(0.869)PMS(0.094)WNSDASTSEAS(0.002);S(0.025)GAMS(0.945)PMS(0.03)WNSDASTSEAS 94.01 0.0019038 8969600 2940.2 3515.3 3399.2 2766 3327.6 2867.7 3323.7 2961.5 3111.7 2795.3 TRUE FALSE 2690.12055 3286.453331 3168.471775 2979.037799 3195.054646 3030.066696 3101.982037 2935.607918 3435.17235 3141.602867 0.856289182 1.046107185 1.008552611 0.9482541 1.017014174 0.964497049 0.987388339 0.934429984 1.093445765 1 11.6172851 -4.748238257 24.99097463 0.995600119 0.856288845 0.481913958 0.044484485 569.895032 1078801.723 0.01051279 0.196956181 1.79E-05 4.748238257 -0.139311274 SGAMSPMS(ph)WNSDASTSEAS ddPTM_A459_MK2206_30min_R1 1 SGAMSPMSWNSDASTSEAS 19 0 Q13158 Q13158 FADD FAS-associated death domain protein 1 S(0.009)GAMS(0.481)PMS(0.509)WNSDASTSEAS 106.6 0.0021499 0 2273.7 1618.2 1982.5 1632.6 1877.4 1950.6 1697 1646.7 1620.6 1461.6 TRUE FALSE 2080.309875 1512.854886 1847.933424 1758.343135 1802.619183 2061.041286 1583.796226 1632.303076 1789.067169 1642.674043 1.266416721 0.920970836 1.124954419 1.070415122 1.097368763 1.254686708 0.964157335 0.993686534 1.089118792 1 10.68183052 SGAQAS(ph)STPLSPTR ddPTM_A459_MK2206_30min_R1 1 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.002)GAQAS(0.437)S(0.437)T(0.114)PLS(0.01)PTR 108.14 0.0049822 10142000 5231.9 5089.7 5026.9 4849.2 4836 4235.6 4671.2 4615.1 4736.6 4217.2 TRUE FALSE 4786.899431 4758.359605 4685.688034 5222.686224 4643.37188 4475.416012 4359.592771 4574.750667 5228.98652 4739.658574 1.009967143 1.003945649 0.98861299 1.101911908 0.979684888 0.944248608 0.919811565 0.965206796 1.10324118 1 12.21056742 -6.464569129 24.99994701 0.978137132 1.024216795 0.112842407 0.053632676 555.9914854 238378.0079 0.017220206 0.019525831 3.43E-07 6.464569129 0.046079663 SGAQAS(ph)STPLSPTR ddPTM_A459_MK2206_30min_R2 1 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQAS(0.42)S(0.42)T(0.129)PLS(0.027)PT(0.004)R 135.61 0.00060186 7438500 28869 31759 25574 33249 32685 25452 29560 22260 19802 27847 TRUE FALSE 31079.23284 30181.89424 26426.6244 30532.45034 31401.62267 26420.5937 25678.73649 25169.45843 21524.34217 26938.35467 1.153716818 1.120406001 0.981003655 1.133419272 1.165684507 0.980779785 0.953240716 0.934335402 0.799022154 1 14.71737412 -6.961124294 3.628644018 0.919579584 1.105115729 0.63854897 0.067509028 0.158197533 4.39509177 0.026388193 0.022222464 1.09E-07 6.961124294 0.185536145 SGAQASS(ph)TPLSPTR ddPTM_A459_MK2206_30min_R1 4 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.228)GAQAS(0.085)S(0.258)T(0.258)PLS(0.085)PT(0.085)R;S(0.022)GAQAS(0.107)S(0.355)T(0.149)PLS(0.26)PT(0.107)R;SGAQAS(0.165)S(0.546)T(0.236)PLS(0.05)PT(0.003)R;SGAQAS(0.334)S(0.506)T(0.158)PLSPTR 165.24 0.0002545 161817600 21976.9 20094.1 20716.5 17866 22592.7 20194 21497.1 18654.3 16822.9 15161.3 TRUE FALSE 20107.64925 18785.97044 19310.3217 19242.04242 21692.78492 21337.36683 20063.06768 18491.20742 18571.70066 17039.59631 1.180054321 1.102489173 1.13326169 1.129254594 1.273080919 1.252222555 1.17743797 1.085190464 1.089914357 1 14.05660354 -8.205570609 1.500620729 1.014675644 1.177297496 0.529631702 0.053097242 0.350435432 1.467969728 0.056057613 0.017388478 6.23E-09 8.205570609 0.162621852 SGAQASS(ph)TPLSPTR ddPTM_A459_MK2206_30min_R2 4 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.059)GAQAS(0.134)S(0.607)T(0.197)PLS(0.003)PTR;S(0.001)GAQAS(0.114)S(0.442)T(0.442)PLSPTR;S(0.002)GAQAS(0.131)S(0.42)T(0.42)PLS(0.027)PTR;SGAQAS(0.19)S(0.62)T(0.19)PLSPTR 147.53 0.00047673 108245700 168159 229842 203747 237664 222242 224389 236589 176814 193549 198110 TRUE FALSE 181033.3823 218428.3805 210539.8233 218246.091 213515.6624 232928.2806 205524.5801 199924.1969 210383.5422 191645.6869 0.944625393 1.13975109 1.098588894 1.13879991 1.114116711 1.215411024 1.072419544 1.043196954 1.097773425 1 17.548082 -8.668793265 0.93190067 1.003113668 1.107837153 0.152152339 0.06697668 1.360289887 2.475359006 0.064216281 0.021641288 2.14E-09 8.668793265 0.104723485 SGAQASST(ph)PLSPT(ph)R ddPTM_A459_MK2206_30min_R2 1 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 S(0.005)GAQAS(0.139)S(0.369)T(0.487)PLS(0.381)PT(0.619)R 105.39 0.048058 15618000 49305 50285 43157 60792 45109 51994 46285 36840 37785 48042 TRUE FALSE 53079.82871 47787.92002 44595.83284 55825.09914 43337.79401 53972.6681 40207.7239 41655.11449 41071.471 46474.39347 1.142130639 1.028263447 0.959578587 1.201201241 0.932509082 1.161342065 0.865158658 0.896302488 0.883744099 1 15.50414842 -7.275163213 24.97330089 0.902659844 1.063483072 0.445682193 0.086717095 713.7995021 1298898.251 0.034040348 0.023087367 5.31E-08 7.275163213 0.160823228 SGAQASST(ph)PLSPTR ddPTM_A459_MK2206_30min_R1 1 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.004)GAQAS(0.05)S(0.189)T(0.729)PLS(0.028)PT(0.001)R 117.2 0.0059404 3702600 2409 2180.1 2401.2 2092 2161.7 2112.5 2608.2 2148 1888 1599.8 TRUE FALSE 2204.1019 2038.175094 2238.213234 2253.126202 2075.594912 2232.107924 2434.211737 2129.220262 2084.264356 1797.995302 1.225866329 1.133581991 1.244838199 1.253132419 1.154393957 1.241442579 1.353847663 1.184219036 1.159215685 1 10.81217354 -8.6644904 1.981422247 1.000827419 1.225377226 0.585475391 0.057242833 0.409455626 3.256953337 0.057297873 0.015936266 2.17E-09 8.6644904 0.224549807 SGAQASSTPLS(ph)PTR ddPTM_A459_MK2206_30min_R1 6 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQASSTPLS(0.5)PT(0.5)R;SGAQASSTPLS(0.988)PT(0.012)R;SGAQASST(0.001)PLS(0.984)PT(0.015)R;SGAQASSTPLS(0.902)PT(0.098)R;SGAQASSTPLS(0.716)PT(0.284)R;SGAQASSTPLS(0.98)PT(0.02)R 206.81 7.28E-06 5483142400 24124.1 23139.3 22583.4 21367.8 23497.7 21727.7 23876 23143 20166.4 18393.2 TRUE FALSE 22072.21861 21632.92736 21050.50173 23013.55166 22561.73685 22957.9036 22283.2756 22940.66319 22262.76945 20671.88848 1.067740794 1.046490135 1.018315368 1.113277661 1.091421177 1.110585693 1.077950649 1.109751691 1.076958666 1 14.33538257 -5.762655738 24.99991004 1.088731075 1.044412904 0.210202139 0.032995249 39.55490486 813009.0893 0.008537178 0.013498703 1.73E-06 5.762655738 -0.044318171 SGAQASSTPLS(ph)PTR ddPTM_A459_MK2206_30min_R2 4 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQASSTPLS(0.995)PT(0.005)R;SGAQASSTPLS(0.5)PT(0.5)R;SGAQASSTPLS(0.764)PT(0.235)R;SGAQASSTPLS(0.679)PT(0.321)R 165.24 0.00037792 3079872000 197031 222775 204647 216664 243938 244707 249274 181655 211130 231304 TRUE FALSE 212115.8449 211712.3174 211469.8288 198961.8581 234359.7684 254019.4964 216544.0244 205397.9322 229493.7058 223756.5694 0.947975943 0.946172521 0.945088805 0.889188901 1.047387208 1.135249334 0.967766108 0.917952634 1.02564008 1 17.77157051 -6.266888764 24.98306644 1.015147709 0.93403856 0.358388031 0.05474515 590.2435894 2706007.461 0.0186482 0.021761502 5.41E-07 6.266888764 -0.081109149 SGAQASSTPLSPT(ph)R ddPTM_A459_MK2206_30min_R1 4 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQASSTPLS(0.291)PT(0.709)R;SGAQASSTPLS(0.424)PT(0.575)R;SGAQASSTPLS(0.403)PT(0.597)R;SGAQASSTPLS(0.038)PT(0.962)R 183.76 0.00018111 336160500 12443.1 12937.4 13206.1 10921.4 13000.6 11385.7 13064.3 12072.3 11116 9387.6 TRUE FALSE 11384.749 12095.17291 12309.70673 11762.56812 12482.75857 12030.34849 12192.80438 11966.75315 12271.54798 10550.60676 1.079061068 1.146395955 1.166729744 1.114871247 1.183131819 1.140251814 1.155649591 1.134224166 1.163113009 1 13.36503835 -10.47753552 5.917605332 0.999999907 1.143868811 0.702982863 0.027796983 3.28E-08 5.83E-09 0.025706935 0.006234843 3.33E-11 10.47753552 0.143868905 SGAQASSTPLSPT(ph)R ddPTM_A459_MK2206_30min_R2 4 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQASSTPLS(0.227)PT(0.773)R;SGAQASSTPLS(0.087)PT(0.913)R;SGAQASSTPLS(0.239)PT(0.76)R;SGAQASSTPLS(0.195)PT(0.805)R 209.23 1.25E-05 2930797400 162635.1 213501.5 191642.7 216506 244897 210705.7 227360 172007.1 220685 226059 TRUE FALSE 175086.5683 202899.326 198031.972 198816.7672 235281.1133 218724.2531 197507.3589 194489.0186 239879.7824 218682.7133 0.800642015 0.927825171 0.905567564 0.909156303 1.075901747 1.000189954 0.903168595 0.889366222 1.096930703 1 17.73847966 -3.453147868 0.640644122 0.981247962 2.82E-15 0.405131958 0.066688863 17.87496978 1.480747959 0.029939389 18.85589805 0.000352251 3.453147868 -0.981247962 SGAVQGAGSLGPGS(ph)PVR ddPTM_A459_MK2206_30min_R1 2 SGAVQGAGSLGPGSPVR 17 0 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 SGAVQGAGSLGPGS(1)PVR;SGAVQGAGSLGPGS(1)PVR 208.87 1.63E-29 38967000 5220.6 4735.4 4899.5 4456.3 4598.1 4224.4 4738 4838.4 3782.1 3032.9 TRUE FALSE 4776.560556 4427.124599 4566.935591 4799.524998 4414.94794 4463.581877 4421.936665 4796.098379 4175.262829 3408.638549 1.401310373 1.298795556 1.339812223 1.408047503 1.295223262 1.30949111 1.29727356 1.407042228 1.224906299 1 11.73497991 -8.589476577 4.28636381 1.000090614 1.340035216 0.850991612 0.04413249 0.113006081 5.797484418 0.041686312 0.010891598 2.57E-09 8.589476577 0.339944601 SGCS(ph)DLEEAVDSGADKK ddPTM_A459_MK2206_30min_R1 1 SGCSDLEEAVDSGADKK 17 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 S(0.006)GCS(0.994)DLEEAVDSGADKK 146.15 0.00022763 9469300 2803.5 3445.7 2820.9 2986.3 2517 2384.7 2550.8 2971.6 2894 3201.1 TRUE FALSE 2565.047603 3221.384304 2629.425167 3216.305343 2416.74256 2519.719653 2380.640786 2945.619614 3194.841656 3597.676435 0.712973401 0.8954069 0.730867607 0.893995166 0.671750949 0.700374172 0.661716202 0.818756124 0.88802918 1 11.81284973 -8.411594001 2.072213813 0.994804652 0.757717937 0.497290422 0.078895393 0.261906187 2.339952777 0.076929815 0.021668811 3.88E-09 8.411594001 -0.237086716 SGCS(ph)DLEEAVDSGADKK ddPTM_A459_MK2206_30min_R2 2 SGCSDLEEAVDSGADKK 17 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 S(0.075)GCS(0.924)DLEEAVDS(0.001)GADKK;S(0.207)GCS(0.793)DLEEAVDSGADKK 106.89 0.0012847 23690000 52303 55282 58642 53999 59416 38734 70076 47350 50555 60127 TRUE FALSE 56307.35789 52536.77627 60597.09501 49587.10897 57083.0293 40208.04951 60874.93702 53538.80758 54952.18252 58165.06091 0.968061531 0.903235988 1.041812629 0.852523976 0.981397224 0.691274949 1.046589414 0.920463363 0.944762743 1 15.82786518 -8.70212085 1.043098055 0.998804582 0.921519543 0.0522343 0.096792678 2.603469393 5.733362798 0.08944153 0.028821359 1.99E-09 8.70212085 -0.077285039 SGCSEAQPPES(ph)PETR ddPTM_A459_MK2206_30min_R1 2 SGCSEAQPPESPETR 15 0 A0A494BZT8;Q9Y6A5;H0Y8F2;A0A494C117 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 SGCSEAQPPES(1)PETR;SGCS(0.003)EAQPPES(0.989)PET(0.009)R 207.92 1.73E-06 32546000 1795.16 1289.66 1250.49 1565.04 1489.42 1411.53 1441.7 1289.91 1146.79 1271.01 TRUE FALSE 1642.472215 1205.7029 1165.610223 1685.579652 1430.093248 1491.449609 1345.526824 1278.632453 1266.002924 1428.472314 1.149810324 0.84405059 0.815983769 1.179987624 1.001134732 1.044087165 0.941934128 0.895104819 0.886263536 1 10.48025736 -7.470282922 7.031507219 0.91799077 0.997408991 0.095203208 0.111107175 0.63670519 72.47758989 0.048936352 0.032414361 3.39E-08 7.470282922 0.07941822 SGCSEAQPPES(ph)PETR ddPTM_A459_MK2206_30min_R2 1 SGCSEAQPPESPETR 15 0 A0A494BZT8;Q9Y6A5;H0Y8F2;A0A494C117 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 SGCSEAQPPES(0.979)PET(0.021)R 118.48 0.002389 0 5101.5 6256.9 4774.8 6451.4 6964.4 5937.4 6962.9 6707 7938.1 8084.1 TRUE FALSE 5492.074762 5946.191444 4933.989449 5924.299983 6690.942663 6163.351918 6048.662866 7583.627929 8628.541589 7820.316479 0.702282929 0.760351766 0.630919409 0.75755246 0.85558464 0.788120524 0.773454998 0.969734147 1.103349412 1 12.93301128 -7.832062977 2.852020822 1.051769141 0.750587584 0.820166469 0.059160823 0.114034774 1.839028366 0.041428303 0.017679864 1.47E-08 7.832062977 -0.301181557 SGCSEAQPPESPET(ph)R ddPTM_A459_MK2206_30min_R2 1 SGCSEAQPPESPETR 15 0 A0A494BZT8;Q9Y6A5;H0Y8F2;A0A494C117 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 SGCSEAQPPES(0.24)PET(0.76)R 102.36 0.014843 26891000 12611 13359 13714 16660 17395 15260 14706 21128 15779 14701 TRUE FALSE 13576.50786 12695.61149 14171.21792 15298.82471 16711.9849 15840.72999 12775.08453 23889.50214 17151.4289 14221.30757 0.954659604 0.892717594 0.996477844 1.075767796 1.175137013 1.113872962 0.898305902 1.679838652 1.206037406 1 13.7957665 -6.195210891 0.660076973 1.250325264 0.895730218 0.21808459 0.193603234 1.266039864 1.14821008 0.126351052 0.259127112 6.38E-07 6.195210891 -0.354595046 SGCSSQSIS(ph)PMR ddPTM_A459_MK2206_30min_R2 1 SGCSSQSISPMR 12 0 C9JD37;Q14449-2;Q14449 C9JD37 GRB14 Growth factor receptor-bound protein 14 1 SGCSSQS(0.002)IS(0.998)PMR 94.023 0.019497 3866300 22537 18931 20852 20801 21612 14568 19815 17138 15693 20321 TRUE FALSE 24262.45005 17990.91407 21547.19527 19101.49176 20763.40429 15122.39545 17213.2667 19377.99544 17057.94877 19657.92743 1.234232354 0.915198926 1.096107173 0.971694082 1.056235677 0.769277204 0.875639955 0.985759842 0.867738923 1 14.2628236 -6.724199599 24.99369152 0.897290377 1.044633728 0.380550644 0.098443319 184.4473046 123792.355 0.031049759 0.031049022 1.89E-07 6.724199599 0.147343351 SGDAAIVDMVPGKPMCVES(ph)FSDYPPLGR ddPTM_A459_MK2206_30min_R1 1 SGDAAIVDMVPGKPMCVESFSDYPPLGR 28 1 P68104;A0A087WVQ9;Q5VTE0 P68104 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 1 SGDAAIVDMVPGKPMCVES(0.484)FS(0.484)DY(0.031)PPLGR 50.945 0.013174 6030100 902.55 968.28 852.11 720.1 1062.6 743.96 717.65 702.22 836.09 530.64 TRUE FALSE 825.783383 905.244796 794.2711473 775.5622268 1020.274392 786.0823723 669.7768779 696.0805646 923.0045475 596.3796893 1.384660474 1.51790011 1.331821257 1.300450436 1.710779911 1.318090449 1.123071241 1.167176846 1.547679379 1 9.220087315 -6.994873465 24.98766456 1.223008611 1.44579394 0.311505525 0.167784768 182.6440128 890233.6993 0.058260408 0.051206149 1.01E-07 6.994873465 0.222785329 SGDAAIVDMVPGKPMCVESFSDYPPLGR ddPTM_A459_MK2206_30min_R1 4 SGDAAIVDMVPGKPMCVESFSDYPPLGR 28 1 P68104;A0A087WVQ9;Q5VTE0 P68104 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 0 ;;; 138.25 4.69E-12 116461600 11737.4 12872.8 13288.9 12460.8 13615.2 11550.1 12943.1 12825.9 10639.1 9857.83 FALSE TRUE 10739.07249 12034.77838 12386.88649 13420.53298 13072.87775 12204.05668 12079.68942 12713.76451 11745.07252 11079.0924 0.969309769 1.086260313 1.118041627 1.211338663 1.179959267 1.101539389 1.090313987 1.147545669 1.060111432 1 13.43555208 -10.49421444 14.78233788 0.999999192 1.11259586 0.200543828 0.063353708 0 0 0.064496949 0.015642808 3.20E-11 10.49421444 0.112596668 SGDAAIVDMVPGKPMCVESFSDYPPLGR ddPTM_A459_MK2206_30min_R2 2 SGDAAIVDMVPGKPMCVESFSDYPPLGR 28 1 P68104;A0A087WVQ9;Q5VTE0 P68104 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 0 ; 84.942 9.67E-05 8693100 32982 45281 41820 48154 50352 46997 46566 39441 42453 46652 FALSE TRUE 35507.12728 43032.41138 43214.25793 44219.66416 48374.92748 48785.50377 40451.82826 44596.07412 46145.4852 45129.74906 0.786778744 0.953526494 0.95755591 0.979834036 1.071907744 1.08100543 0.896345074 0.988174653 1.022507019 1 15.46179114 -4.011093366 1.100672353 1.004425347 2.35E-19 0.627695276 0.049596949 5.453860403 1.589138752 0.016294761 9.589470441 9.75E-05 4.011093366 -1.004425347 SGDEGS(ph)EDEAPSGED ddPTM_A459_MK2206_30min_R1 2 SGDEGSEDEAPSGED 15 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 S(0.005)GDEGS(0.995)EDEAPSGED;S(0.002)GDEGS(0.998)EDEAPSGED 152.4 0.00038502 941690 747.7 997.07 890.74 734.9 991.18 846.13 1041.45 682.71 1067.1 995.46 TRUE FALSE 684.1041887 932.1605618 830.2790505 791.5021253 951.6992017 894.0371494 971.9767707 676.7411384 1178.028864 1118.7851 0.611470593 0.833190004 0.742125588 0.707465737 0.850654162 0.79911428 0.868778795 0.604889302 1.052953658 1 10.12771723 -14.52287875 0.070254752 1.824769986 0.494489032 0.374672878 0.111105842 350.01346 1.763063978 45.71590902 5.623562284 3.00E-15 14.52287875 -1.330280954 SGDET(ph)PGSEVPGDK ddPTM_A459_MK2206_30min_R1 2 SGDETPGSEVPGDK 14 0 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 SGDET(1)PGSEVPGDK;SGDET(0.677)PGS(0.323)EVPGDK 222.55 1.12E-08 41083000 11919 12360.6 11837.1 8725.9 9345.2 9076.2 12582.4 10116.8 11662.6 12598.8 TRUE FALSE 10905.22646 11555.92269 11033.63063 9397.97033 8972.960895 9590.0866 11743.05105 10028.34988 12874.96901 14159.63446 0.770162993 0.816117303 0.779231319 0.663715603 0.633700038 0.677283487 0.829332924 0.708235083 0.909272696 1 13.7894964 -8.421576398 3.106674786 0.999063679 0.733973628 0.675563474 0.0622805 0.149785567 2.763676435 0.066144981 0.017723186 3.79E-09 8.421576398 -0.26509005 SGDET(ph)PGSEVPGDK ddPTM_A459_MK2206_30min_R2 3 SGDETPGSEVPGDK 14 0 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.113)GDET(0.887)PGSEVPGDK;SGDET(0.995)PGS(0.005)EVPGDK;SGDET(1)PGSEVPGDK 212.03 7.28E-06 49732000 202932 188786 197399 190888 176765 135780 208097 156399 130874 184937 TRUE FALSE 218468.6299 179411.1618 203980.1841 175291.8398 169824.3179 140947.203 180773.6139 176840.8863 142257.184 178902.5208 1.221160154 1.002843118 1.140175014 0.979817607 0.949256149 0.787843583 1.01045873 0.988476213 0.7951659 1 17.44881419 -5.934531375 2.705355306 0.91956841 1.111402807 0.498872473 0.088757435 0.235512129 3.495470231 0.026241254 0.041325879 1.16E-06 5.934531375 0.191834398 SGDETPGS(ph)EVPGDK ddPTM_A459_MK2206_30min_R2 1 SGDETPGSEVPGDK 14 0 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 SGDET(0.081)PGS(0.919)EVPGDK 119.96 0.0021358 31728000 38332 32497 31404 26921 28758 26900 44504 27402 22490 34391 TRUE FALSE 41266.72739 30883.24624 32450.99369 24721.46818 27628.81642 27923.69835 38660.57134 30983.53549 24446.13955 33268.82449 1.240402329 0.928293882 0.975417502 0.743082107 0.830471676 0.839335287 1.162066046 0.931308393 0.734806232 1 15.02188327 -4.602993066 2.256790215 0.898677398 1.468911785 0.408510177 0.121020379 1.374264863 5.125235515 0.033117598 1.88288983 2.49E-05 4.602993066 0.570234387 SGDLGDMEPLKGT(ph)TPLMQK ddPTM_A459_MK2206_30min_R2 1 SGDLGDMEPLKGTTPLMQK 19 1 O60716-5;O60716-3;A0A669KB05;O60716-8;O60716-7;A0A669KB62;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-16;O60716-23;O60716-15;O60716-27;O60716-29;O60716-31;O60716-32 O60716-5 CTNND1 Catenin delta-1 1 SGDLGDMEPLKGT(0.5)T(0.5)PLMQK 78.441 0.010392 7616400 35987 38305 38504 35391 29094 21766 35750 30981 28431 35327 TRUE FALSE 38742.19239 36402.8294 39787.70414 32499.44209 27951.62337 22594.32038 31055.98206 35030.32307 30903.87699 34174.28288 1.133665117 1.065211215 1.164258641 0.950991194 0.81791397 0.661149803 0.908752999 1.025049251 0.904302135 1 15.06062344 -5.910234318 4.507375985 0.8776677 1.114063343 0.536113679 0.097277866 0.177431682 6.474504627 0.030584809 0.046413356 1.23E-06 5.910234318 0.236395643 SGDWVCPNPSCGNMNFAR ddPTM_A459_MK2206_30min_R1 2 SGDWVCPNPSCGNMNFAR 18 0 Q92804-2;Q92804;A0A075B7D9;A0A075B7F4 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 0 ; 164.48 0.00033252 18965700 4526 4122.4 4512.4 3576.7 4338.8 3862.2 4194.9 4225.3 3478.6 3552.5 FALSE TRUE 4141.039933 3854.031011 4206.11086 3852.178054 4165.976408 4080.874426 3915.065875 4188.358648 3840.212918 3992.61052 1.037176031 0.965291002 1.053473871 0.964826906 1.043421688 1.022106816 0.980577959 1.049027604 0.961830086 1 11.96311663 -4.441206323 22.00387364 1.006987335 2.929332296 0.071323754 0.034330721 1029.223631 322912.5645 0.007499265 16233.97819 3.62E-05 4.441206323 1.922344961 SGEHDFGAAFDGDGDR ddPTM_A459_MK2206_30min_R1 2 SGEHDFGAAFDGDGDR 16 0 A0A3B3ITK7;P36871;P36871-2;P36871-3 A0A3B3ITK7 PGM1 Phosphoglucomutase-1 0 ; 141.06 0.00055909 17530100 8188.6 6803.8 6908.5 4860 8006.2 8963 9629.1 6938 6859.9 7188.6 FALSE TRUE 7492.11657 6360.871383 6439.570268 5234.318042 7687.296101 9470.477314 8986.760308 6877.341797 7573.011153 8079.178039 0.927336486 0.787316649 0.797057601 0.647877546 0.951494826 1.172208023 1.112335966 0.851242758 0.93734921 1 12.97999281 -6.506693952 23.96257236 1.017038301 0.791406924 0.515906427 0.103157304 363.6822294 538454.6115 0.034942782 0.038507502 3.11E-07 6.506693952 -0.225631377 SGEHDFGAAFDGDGDR ddPTM_A459_MK2206_30min_R2 1 SGEHDFGAAFDGDGDR 16 0 A0A3B3ITK7;P36871;P36871-2;P36871-3 A0A3B3ITK7 PGM1 Phosphoglucomutase-1 0 116.86 0.0032766 0 32609 47510 34761 42002 56013 45006 54366 38780 41083 43345 FALSE TRUE 35105.57011 45150.72249 35919.91439 38570.30224 53813.64818 46718.73487 47227.67889 43848.67915 44656.32508 41930.6562 0.837229209 1.076795037 0.856650423 0.919859257 1.28339628 1.114190406 1.126328161 1.045742736 1.065004203 1 15.35571779 -6.207816574 24.99716212 1.109512457 0.928931798 0.48812981 0.091739091 281.5965495 131270.6549 0.026672715 0.034436789 6.20E-07 6.207816574 -0.180580659 SGEISLPIKEEPS(ph)PISK ddPTM_A459_MK2206_30min_R1 2 SGEISLPIKEEPSPISK 17 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2A0 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 SGEISLPIKEEPS(0.954)PIS(0.046)K;SGEISLPIKEEPS(0.966)PIS(0.034)K 71.527 0.016219 35257000 8514.9 8821 7439.4 6634.1 5852.4 4595.5 5426.6 5995.2 5576.8 4638.6 TRUE FALSE 7790.663041 8246.751297 6934.434255 7145.059531 5619.286515 4855.693239 5064.601415 5942.784598 6156.528317 5213.264788 1.494392355 1.581878464 1.330151937 1.370553736 1.07788243 0.931411205 0.971483633 1.139935307 1.180935281 1 12.34797142 -6.023612556 1.60118752 1.042189373 1.509148693 0.827988554 0.089063654 0.159969389 0.826134476 0.033087782 0.055095956 9.47E-07 6.023612556 0.466959321 SGEISLPIKEEPS(ph)PISK ddPTM_A459_MK2206_30min_R2 1 SGEISLPIKEEPSPISK 17 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2A0 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 SGEISLPIKEEPS(0.987)PIS(0.013)K 68.401 0.020157 11261000 107950 106440 95528 83338 98213 56336 92712 59484 67269 88549 TRUE FALSE 116214.735 101154.3444 98712.85584 76529.01881 94356.66414 58479.90596 80538.80303 67258.76304 73119.93603 85659.65338 1.356703307 1.180886688 1.152384488 0.893407991 1.101529838 0.682700707 0.940218643 0.785186028 0.853609992 1 16.38632822 -5.292206846 0.757837454 0.853864201 1.452245279 0.6753898 0.110535269 0.833235759 0.585944094 0.045674134 0.375784902 5.10E-06 5.292206846 0.598381078 SGELGLPGAPESSTASAPGEPSPPS(ph)PPCR ddPTM_A459_MK2206_30min_R2 1 SGELGLPGAPESSTASAPGEPSPPSPPCR 29 0 Q5QP82;Q5QP82-2 Q5QP82;Q5QP82-2 DCAF10 DDB1- and CUL4-associated factor 10 1 SGELGLPGAPESSTASAPGEPS(0.008)PPS(0.992)PPCR 105.66 1.12E-10 4299400 16280 22430 14736 19124 22144 24367 17409 17246 17542 16176 TRUE FALSE 17526.40932 21316.15882 15227.29089 17561.50803 21274.5153 25294.30326 15123.17739 19500.11141 19067.77145 15648.17844 1.120028723 1.362213429 0.973103096 1.122271713 1.359552191 1.616437552 0.966449702 1.246158553 1.218529781 1 13.93370711 -9.69708127 0.914576979 0.995235603 1.22615426 0.113185609 0.185041729 27.12348762 18.39089631 0.67591588 0.060214544 2.01E-10 9.69708127 0.230918657 SGEQAEGS(ph)PGGPGDSQGR ddPTM_A459_MK2206_30min_R1 5 SGEQAEGSPGGPGDSQGR 18 0 P38936 P38936 CDKN1A Cyclin-dependent kinase inhibitor 1 1 S(0.013)GEQAEGS(0.987)PGGPGDSQGR;SGEQAEGS(1)PGGPGDSQGR;S(0.001)GEQAEGS(0.635)PGGPGDS(0.364)QGR;S(0.008)GEQAEGS(0.992)PGGPGDSQGR;SGEQAEGS(1)PGGPGDSQGR 155.08 2.85E-05 52779070 4247.7 3915.51 4172.67 3393.65 4497.23 3442.84 4427.52 3625.85 3611.385 3211.312 TRUE FALSE 3886.410809 3660.609587 3889.440786 3655.029511 4318.095806 3637.770626 4132.168219 3594.149576 3986.801394 3609.153575 1.07682057 1.014257086 1.077660096 1.012710996 1.196428946 1.00792902 1.14491338 0.995842793 1.104636118 1 11.81744482 -3.49258562 18.58017403 1.065092759 1.113575703 0 0.065656771 0 0 0.013738431 0 0.000321673 3.49258562 0.048482943 SGEQAEGS(ph)PGGPGDSQGR ddPTM_A459_MK2206_30min_R2 4 SGEQAEGSPGGPGDSQGR 18 0 P38936 P38936 CDKN1A Cyclin-dependent kinase inhibitor 1 1 SGEQAEGS(0.988)PGGPGDS(0.011)QGR;SGEQAEGS(0.783)PGGPGDS(0.217)QGR;S(0.004)GEQAEGS(0.996)PGGPGDSQGR;SGEQAEGS(1)PGGPGDSQGR 120.15 0.0009596 115514700 18376.7 25628.7 23209.8 22842.8 23160.1 22798.1 24306.2 22164 25758.6 23781.8 TRUE FALSE 19783.63428 24356.01603 23983.60315 20976.47017 22250.7181 23665.69767 21114.76674 25060.9109 27999.03647 23005.80181 0.85994109 1.058690161 1.04250238 0.91179044 0.967178553 1.028683889 0.917801819 1.089330035 1.217042409 1 14.48971012 -7.896243357 6.023283453 1.122512017 0.976141956 0.380509893 0.076927685 0.197186657 9.769511742 0.041201735 0.019444262 1.27E-08 7.896243357 -0.146370061 SGEQAEGSPGGPGDS(ph)QGRK ddPTM_A459_MK2206_30min_R1 1 SGEQAEGSPGGPGDSQGRK 19 1 P38936 P38936 CDKN1A Cyclin-dependent kinase inhibitor 1 1 S(0.003)GEQAEGS(0.359)PGGPGDS(0.638)QGRK 58.964 0.022862 3519700 1671.7 1374.1 1733 1514.6 1886.7 1570.1 1668.7 1930.3 1155.6 824.46 TRUE FALSE 1529.513137 1284.64584 1615.368788 1631.254754 1811.548744 1658.997705 1557.384068 1913.423591 1275.728755 926.6003292 1.650671912 1.38640771 1.743328529 1.760472885 1.955048673 1.790413464 1.680750609 2.064993429 1.376784267 1 9.855803385 -8.523981509 6.650771845 1.000101468 1.74631007 0.667201676 0.1704159 0.068380033 23.01781055 0.173191912 0.044832458 2.99E-09 8.523981509 0.746208602 SGETSVRFT(ph)AGR ddPTM_A459_MK2206_30min_R2 1 SGETSVRFTAGR 12 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 SGETSVRFT(1)AGR 145.9 0.0069507 12468000 7826.9 10735 8057.3 9846.6 12391 10466 11771 7717.3 8148.3 7902.1 TRUE FALSE 8426.133482 10201.91551 8325.926361 9042.101282 11904.46708 10864.29096 10225.45356 8725.977607 8857.024405 7644.255124 1.102283132 1.334585953 1.089174318 1.182862311 1.557308971 1.421236051 1.337665135 1.141507899 1.158651073 1 12.90016021 -8.285311317 1.581996341 1.020589748 1.291269933 0.28753699 0.138786984 0.508068238 2.45418128 0.141029464 0.042508856 5.18E-09 8.285311317 0.270680185 SGEVAEGEARS(ph)PSHK ddPTM_A459_MK2206_30min_R2 1 SGEVAEGEARSPSHK 15 1 O00257 O00257 CBX4 E3 SUMO-protein ligase CBX4 1 SGEVAEGEARS(0.818)PS(0.182)HK 57.434 0.04062 6449600 19857 46697 28585 47077 43958 42380 44932 33110 42527 32905 TRUE FALSE 21377.26719 44378.09488 29538.00963 43230.65851 42231.98805 43992.8006 39032.37443 37437.59068 46225.92159 31831.31254 0.671579821 1.394164781 0.927954497 1.358117371 1.326743532 1.382060527 1.226225729 1.17612463 1.452215378 1 14.95815903 -4.75291068 24.99978889 1.254001429 0.67157873 0.527269411 0.164050276 248.9708647 729741.6321 0.038846553 0.441007817 1.77E-05 4.75291068 -0.582422698 SGFEPASLKEEVGEEAIVELVENGKK ddPTM_A459_MK2206_30min_R1 1 SGFEPASLKEEVGEEAIVELVENGKK 26 2 P35579;B1AH99;Q5BKV1 P35579 MYH9 Myosin-9 0 60.33 0.0036259 2230600 277.54 348.16 254.8 207.8 183.72 183 239.56 243.74 113.04 304.3 FALSE TRUE 253.9337656 325.4947207 237.5048859 223.804792 176.4020434 193.3613019 223.5793895 241.6090069 124.7909125 341.9989813 0.742498602 0.951741784 0.694460799 0.654401926 0.515796985 0.565385608 0.653742852 0.706461189 0.364886796 1 8.417848218 -5.48216738 3.978692949 0.619659913 0.84705479 0.204317116 0.159955008 0.287116917 9.616751635 0.040509849 0.085322513 3.29E-06 5.48216738 0.227394877 SGFGEIS(ph)SPVIR ddPTM_A459_MK2206_30min_R1 1 SGFGEISSPVIR 12 0 P57740;G3V1T4 P57740 NUP107 Nuclear pore complex protein Nup107 1 SGFGEIS(0.775)S(0.224)PVIR 158.06 0.00045051 7577600 4326.5 3903.2 3730.9 3216 3987 3570.7 4230.7 3776.1 3078 3560.8 TRUE FALSE 3958.508456 3649.100971 3477.656903 3463.696877 3828.189347 3772.869948 3948.477722 3743.085956 3397.969115 4001.938787 0.989147677 0.91183328 0.868993028 0.865504712 0.956583684 0.942760534 0.986641209 0.935318143 0.849080732 1 11.96648338 -6.294797164 24.96950077 0.943793642 0.906233005 0.113959238 0.049146626 1453.523374 1088010.176 0.01576364 0.017875521 5.07E-07 6.294797164 -0.037560637 SGFGEISS(ph)PVIR ddPTM_A459_MK2206_30min_R1 2 SGFGEISSPVIR 12 0 P57740;G3V1T4 P57740 NUP107 Nuclear pore complex protein Nup107 1 SGFGEIS(0.154)S(0.846)PVIR;SGFGEIS(0.021)S(0.979)PVIR 231.66 4.35E-10 104072000 13530.9 10487.9 10130.8 9263.9 10434.7 9268.8 9906.3 8802.3 8956.2 7914.8 TRUE FALSE 12380.0259 9805.135804 9443.149522 9977.407183 10019.0638 9793.591446 9245.468802 8725.342419 9887.22904 8895.345178 1.391742046 1.102277158 1.061583259 1.121643622 1.12632659 1.100979361 1.039360319 0.980888571 1.111505944 1 13.11883487 -4.759675705 4.169615287 1.071711874 1.424763894 0.805718721 0.047395393 0.104269378 3.567100868 0.012493003 0.113785527 1.74E-05 4.759675705 0.35305202 SGFGEISS(ph)PVIR ddPTM_A459_MK2206_30min_R2 3 SGFGEISSPVIR 12 0 P57740;G3V1T4 P57740 NUP107 Nuclear pore complex protein Nup107 1 SGFGEIS(0.024)S(0.976)PVIR;SGFGEIS(0.02)S(0.98)PVIR;SGFGEIS(0.143)S(0.857)PVIR 179.6 0.00010389 57812000 177465 178125 156287 165157 189778 184023 180417 118542 138171 161622 TRUE FALSE 191051.8568 169279.5715 161497.5306 151663.1448 182326.3622 191026.1242 156728.0312 134035.8464 150188.8638 156348.2874 1.221963221 1.082708192 1.032934439 0.970033937 1.166155161 1.221798636 1.002428833 0.857290148 0.960604471 1 17.25440389 -7.515628946 22.99443393 0.931340206 1.106785017 0.494567213 0.08112176 105.7491746 335418.2262 0.03881967 0.023654719 3.05E-08 7.515628946 0.175444811 SGGGLHSVAEGVRLS(ph)PEPGR ddPTM_A459_MK2206_30min_R1 1 SGGGLHSVAEGVRLSPEPGR 20 1 Q9NWK9-2;Q9NWK9 Q9NWK9-2 ZNHIT6 Box C/D snoRNA protein 1 1 SGGGLHSVAEGVRLS(0.999)PEPGR 58.688 0.01486 27851000 5025.6 4134.3 4355.7 3397.3 6173 5232.4 5276.2 4984.2 2876.1 1884.9 TRUE FALSE 4598.14633 3865.156319 4060.04722 3658.960635 5927.116338 5528.653966 4924.234325 4940.623665 3175.080887 2118.415642 2.17055909 1.8245505 1.916548924 1.727215643 2.797900573 2.609806053 2.32448922 2.332225823 1.498799775 1 11.04876996 SGGGLHSVAEGVRLS(ph)PEPGR ddPTM_A459_MK2206_30min_R2 4 SGGGLHSVAEGVRLSPEPGR 20 1 Q9NWK9-2;Q9NWK9 Q9NWK9-2 ZNHIT6 Box C/D snoRNA protein 1 1 SGGGLHSVAEGVRLS(1)PEPGR;SGGGLHSVAEGVRLS(1)PEPGR;SGGGLHSVAEGVRLS(1)PEPGR;S(0.001)GGGLHS(0.007)VAEGVRLS(0.992)PEPGR 121.35 0.00013567 103891000 111161 244214 170513 260482 254563 279352 237713 167044 247504 174060 TRUE FALSE 119671.5716 232086.6879 176197.8183 239199.7874 244567.5775 289982.9361 206500.9976 188877.2243 269031.4505 168380.4365 0.710721353 1.378347109 1.046426901 1.420591325 1.452470267 1.722189004 1.226395429 1.121729034 1.597759551 1 17.361365 -4.497696498 2.191601357 1.347263625 8.48E-16 0.393553895 0.225584193 2.26270196 5.651365396 0.059163532 8.063966669 3.18E-05 4.497696498 -1.347263625 SGGGPGPSGSET(ph)PPPPR ddPTM_A459_MK2206_30min_R1 2 SGGGPGPSGSETPPPPR 17 0 P27987-2;P27987 P27987-2 ITPKB Inositol-trisphosphate 3-kinase B 1 SGGGPGPS(0.001)GS(0.004)ET(0.995)PPPPR;SGGGPGPS(0.004)GS(0.003)ET(0.993)PPPPR 140.93 0.00056128 0 1969.45 952.65 947.7 902.84 2957.5 2219.96 2407.3 1870.34 630.3 1127.36 TRUE FALSE 1801.937936 890.6323118 883.3727644 972.3768932 2839.696512 2345.652217 2246.713409 1853.987815 695.8219406 1267.025868 1.422179279 0.702931435 0.697201838 0.767448335 2.2412301 1.851305704 1.773218264 1.463259639 0.549177375 1 10.30723026 -6.209418916 24.99984398 1.536119009 0.869243616 0.256585915 0.478840816 445.8283095 214254.5084 0.146425748 0.189034651 6.17E-07 6.209418916 -0.666875393 SGGGPGPSGSET(ph)PPPPR ddPTM_A459_MK2206_30min_R2 2 SGGGPGPSGSETPPPPR 17 0 P27987-2;P27987 P27987-2 ITPKB Inositol-trisphosphate 3-kinase B 1 SGGGPGPS(0.005)GS(0.005)ET(0.99)PPPPR;SGGGPGPS(0.002)GS(0.006)ET(0.992)PPPPR 139 0.00070524 0 7534.4 13279.2 9964.9 15835.2 12678.4 19127.7 11033.9 9805.1 12901.8 7014.4 TRUE FALSE 8111.239457 12619.77424 10297.12479 14541.41351 12180.58231 19855.61803 9585.135676 11086.66024 14023.97524 6785.520702 1.195374653 1.85980926 1.517514314 2.143006284 1.795084393 2.926174556 1.412586608 1.633870225 2.066750049 1 12.72824381 -4.336594089 1.465885969 1.878147703 7.81E-10 0.113498216 0.489556955 7.911349749 6.505189625 0.134499862 29.89705513 4.61E-05 4.336594089 -1.878147702 SGGGYGGDRS(ph)SGGGYSGDR ddPTM_A459_MK2206_30min_R1 2 SGGGYGGDRSSGGGYSGDR 19 1 Q92804-2;Q92804;A0A075B7F4 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 1 SGGGYGGDRS(0.496)S(0.496)GGGYS(0.007)GDR;SGGGYGGDRS(0.812)S(0.185)GGGY(0.002)SGDR 80.238 0.0068127 16763000 2909.81 3102.55 3317.97 2834.68 3571.24 2856.33 3081.79 3269.07 2222.17 1683.86 TRUE FALSE 2662.315379 2900.573431 3092.755441 3053.007545 3428.989949 3018.052936 2876.209412 3240.488866 2453.172524 1892.469289 1.406794496 1.532692471 1.634243397 1.613240205 1.811913127 1.594769835 1.519818276 1.71230724 1.296281286 1 10.88605417 -8.512100479 3.580624636 1.001384983 1.604963313 0.773839962 0.104445384 0.092589283 3.084660906 0.104514628 0.027558376 3.08E-09 8.512100479 0.60357833 SGGGYGGDRSS(ph)GGGYSGDR ddPTM_A459_MK2206_30min_R1 1 SGGGYGGDRSSGGGYSGDR 19 1 Q92804-2;Q92804;A0A075B7F4 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 1 S(0.001)GGGY(0.02)GGDRS(0.155)S(0.759)GGGY(0.059)S(0.005)GDR 66.977 0.011836 16546000 1054.1 994.31 1068.5 941.49 1093.4 984.09 971.14 1213.5 753.46 645.97 TRUE FALSE 964.4432597 929.5802383 995.973197 1014.003723 1049.847563 1039.808325 906.3570225 1202.890497 831.7848633 725.9976404 1.32843856 1.280417713 1.371868366 1.396703882 1.446075723 1.432247527 1.248429708 1.656879348 1.145712902 1 9.503821049 -8.513542287 23.92488314 0.999999981 1.389422448 0.610946317 0.106027336 180.9504367 463688.7766 0.097730338 0.025233865 3.07E-09 8.513542287 0.389422466 SGGIVIS(ph)PFR ddPTM_A459_MK2206_30min_R1 2 SGGIVISPFR 10 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 SGGIVIS(1)PFR;SGGIVIS(1)PFR 114.71 0.006874 29622000 5594.1 5312.7 4882.1 3638.8 4258.1 3954.1 5702.5 4436.6 5742.9 6277.9 TRUE FALSE 5118.292419 4966.842264 4550.716654 3919.061006 4088.49086 4177.977725 5322.09663 4397.811274 6339.895006 7055.653648 0.725417187 0.703952109 0.644974496 0.555449743 0.579463089 0.592146091 0.754302421 0.623303168 0.898555304 1 12.78456403 -8.383962648 3.107593268 0.99859169 0.644454287 0.79454198 0.062215922 0.110430215 1.952116202 0.064320234 0.01734233 4.13E-09 8.383962648 -0.354137403 SGGIVIS(ph)PFR ddPTM_A459_MK2206_30min_R2 2 SGGIVISPFR 10 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 SGGIVIS(1)PFR;SGGIVIS(1)PFR 117.86 0.0058922 57722000 142438 112066 123706 117520 126091 107993 138776 119685 92113 138261 TRUE FALSE 153343.1628 106500.9654 127830.2963 107918.2401 121140.0338 112102.7493 120554.5445 135328.2404 100124.8222 133749.5549 1.146494752 0.79627155 0.955743714 0.806868032 0.905722893 0.838154186 0.901345388 1.011803296 0.748599293 1 17.02917456 -4.749198635 24.98346166 0.884786333 1.146495356 0.468726243 0.083535986 478.7271401 977026.1156 0.019054961 0.320051446 1.78E-05 4.749198635 0.261709023 SGGIVIS(ph)PFRLEELTNR ddPTM_A459_MK2206_30min_R1 1 SGGIVISPFRLEELTNR 17 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 S(0.001)GGIVIS(0.999)PFRLEELTNR 78.554 0.010262 49046000 3994.2 3831.1 3896.9 3937.6 4551.6 3847 3835 3522.2 2630.6 2179.8 TRUE FALSE 3654.472316 3581.694694 3632.389285 4240.874634 4370.300134 4064.813815 3579.174147 3491.405777 2904.060284 2449.850081 1.491712634 1.462005664 1.4826986 1.731075166 1.783905133 1.659209209 1.460976807 1.42515079 1.185403265 1 11.25847775 -8.238889697 1.294006604 1.004811597 1.598575374 0.785838927 0.104216945 0.216924301 0.70566072 0.113634012 0.036209066 5.77E-09 8.238889697 0.593763777 SGGIVIS(ph)PFRLEELTNR ddPTM_A459_MK2206_30min_R2 2 SGGIVISPFRLEELTNR 17 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 SGGIVIS(1)PFRLEELTNR;SGGIVIS(0.998)PFRLEELT(0.002)NR 96.379 0.0033087 37352000 39084 66242 58207 75126 82628 76627 67590 58005 69906 58257 TRUE FALSE 42076.30109 62952.5186 60147.59233 68987.96548 79383.60955 79543.09418 58715.35181 65586.45266 75986.29752 56356.07886 0.746615129 1.117049303 1.067277808 1.224144172 1.408607752 1.411437697 1.041863682 1.163786658 1.348324778 1 15.78228361 -4.332755174 1.105511746 1.234133394 1.42E-15 0.502549158 0.138391061 3.390550005 1.750427313 0.044070365 6.201179908 4.65E-05 4.332755174 -1.234133394 SGGLQT(ph)PECLSR ddPTM_A459_MK2206_30min_R1 1 SGGLQTPECLSR 12 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 S(0.001)GGLQT(0.986)PECLS(0.013)R 110.22 0.0171 14313000 2912.7 2924.9 3081.1 2648.2 2860.9 2631.1 3254.8 2688.9 2869.3 2641.5 TRUE FALSE 2664.95957 2734.488478 2871.963516 2852.164823 2746.944295 2780.070608 3037.678231 2665.391231 3167.574003 2968.748962 0.897670906 0.921091178 0.967398575 0.960729539 0.925286823 0.936445164 1.023218288 0.897816307 1.066972669 1 11.53563939 -1.522878745 0.139999428 1.023839001 0.617108921 0.32260307 0.04364393 95.18833756 0.890996662 0.179962687 7.744181508 0.03 1.522878745 -0.406730079 SGGLQT(ph)PECLSR ddPTM_A459_MK2206_30min_R2 2 SGGLQTPECLSR 12 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 S(0.159)GGLQT(0.839)PECLS(0.002)R;S(0.007)GGLQT(0.993)PECLSR 112.62 0.014731 61779000 220130 265980 257590 263345 235320 227150 270740 239780 239866 244030 TRUE FALSE 236983.3221 252771.82 266177.922 241828.8711 226080.1544 235794.3524 235191.5128 271120.0693 260729.1111 236067.3211 1.003880253 1.07076159 1.127550907 1.024406385 0.957693565 0.998843683 0.996290006 1.148486237 1.104469309 1 17.84883882 -10.43617319 5.10065185 0.999999863 1.047681711 0.054693598 0.059902077 1.02E-07 2.18E-08 0.063693832 0.015447979 3.66E-11 10.43617319 0.047681848 SGGLQTPECLS(ph)R ddPTM_A459_MK2206_30min_R1 2 SGGLQTPECLSR 12 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 SGGLQT(0.002)PECLS(0.998)R;SGGLQTPECLS(1)R 201.76 7.42E-05 118360000 2045.37 2552.9 2184.05 1842.4 2448.7 3021.7 4390.5 4520.5 5363.2 6142.8 TRUE FALSE 1871.400541 2386.705746 2035.802771 1984.301967 2351.163094 3192.786043 4097.617756 4480.977745 5920.723832 6903.81644 0.27106754 0.34570817 0.294880779 0.287421021 0.340559908 0.462466821 0.59352936 0.649058066 0.857601572 1 12.75317839 -7.81068446 0.694676582 1.001968535 0.285858222 0.983642514 0.03127866 0.079783125 0.076391388 0.030685056 0.014983489 1.55E-08 7.81068446 -0.716110313 down SGGLQTPECLS(ph)R ddPTM_A459_MK2206_30min_R2 3 SGGLQTPECLSR 12 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 SGGLQTPECLS(1)R;SGGLQTPECLS(1)R;SGGLQTPECLS(1)R 163.62 0.00050249 242738000 199757 243689 244283 267961 278454 323539 468210 468112 539285 631410 TRUE FALSE 215050.5495 231587.7586 252427.2733 246067.7291 267520.4968 335851.5034 406733.4646 529295.8457 586191.0345 610807.1434 0.352076022 0.379150377 0.413268371 0.402856666 0.437978664 0.549848683 0.665895068 0.866551499 0.959699049 1 19.22035741 -7.526776115 0.940435197 1.01396163 0.380921791 0.994079008 0.018490613 0.039088493 0.063851408 0.015701627 0.007454125 2.97E-08 7.526776115 -0.633039839 down SGGS(ph)GGCSGAGGASNCGTGSGR ddPTM_A459_MK2206_30min_R1 2 SGGSGGCSGAGGASNCGTGSGR 22 0 E9PL01;A0A087WUC6;E9PI68;Q15005 E9PL01 SPCS2 Signal peptidase complex subunit 2 1 S(0.05)GGS(0.95)GGCSGAGGASNCGTGSGR;S(0.015)GGS(0.985)GGCSGAGGASNCGTGSGR 108.69 5.42E-05 721470 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 SGGS(ph)GGCSGAGGASNCGTGSGR ddPTM_A459_MK2206_30min_R2 1 SGGSGGCSGAGGASNCGTGSGR 22 0 E9PL01;A0A087WUC6;E9PI68;Q15005 E9PL01 SPCS2 Signal peptidase complex subunit 2 1 S(0.373)GGS(0.627)GGCS(0.001)GAGGASNCGTGSGR 202.52 1.36E-22 717990 676 0 0 527.79 572.71 525.5 582.98 464.47 749.15 0 TRUE FALSE 727.7550798 0 0 484.6678687 550.2225278 545.4982707 506.4340257 525.1778238 814.3097128 0 0 SGGSGHAVAEPAS(ph)PEQELDQNK ddPTM_A459_MK2206_30min_R1 2 SGGSGHAVAEPASPEQELDQNK 22 0 P46013 P46013 MKI67 Antigen KI-67 1 SGGSGHAVAEPAS(1)PEQELDQNK;SGGSGHAVAEPAS(1)PEQELDQNK 273.96 6.19E-66 24132000 5736.1 3182.3 4269.2 2109.1 6530.6 8312.3 6185.1 4844.4 3171.2 3051.9 TRUE FALSE 5248.214574 2975.131692 3979.418599 2271.543247 6270.472373 8782.935243 5772.503264 4802.045922 3500.857588 3429.992413 1.530095097 0.867387252 1.160182916 0.662258971 1.8281301 2.560628184 1.682949281 1.400016485 1.020660447 1 11.74398967 -6.274367103 24.84521292 1.656037385 1.049095907 0.225675197 0.466328412 1001.834296 1925376.35 0.152287175 0.173750718 5.32E-07 6.274367103 -0.606941478 SGGSGHAVAEPAS(ph)PEQELDQNK ddPTM_A459_MK2206_30min_R2 4 SGGSGHAVAEPASPEQELDQNK 22 0 P46013 P46013 MKI67 Antigen KI-67 1 SGGSGHAVAEPAS(1)PEQELDQNK;SGGSGHAVAEPAS(1)PEQELDQNK;SGGSGHAVAEPAS(1)PEQELDQNK;SGGSGHAVAEPAS(1)PEQELDQNK 189.52 6.97E-22 66886000 84295 200255 135788 287844 252019 262428 347045 263367 186985 183040 TRUE FALSE 90748.69001 190310.6279 140315.1041 264326.2244 242123.4678 272414.8814 301477.5746 297789.9712 203248.6173 177067.4198 0.512509247 1.074791896 0.792438859 1.492799888 1.367408347 1.538481115 1.702614603 1.681788618 1.14786005 1 17.43393926 -5.761328712 24.99999998 1.461797991 0.821401063 0.575588774 0.243806012 1.964201753 443468.0766 0.065574294 0.10493653 1.73E-06 5.761328712 -0.640396928 SGIET(ph)FSPPPPPPK ddPTM_A459_MK2206_30min_R2 1 SGIETFSPPPPPPK 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 S(0.001)GIET(0.534)FS(0.465)PPPPPPK 93.823 0.032618 9913600 79074 98847 93637 107320 84756 77693 102220 89154 80251 91701 TRUE FALSE 85127.96624 93938.40172 96758.81085 98551.6127 81428.05358 80649.66156 88798.39121 100806.7339 87231.08692 88708.80388 0.959633796 1.058952411 1.090746427 1.110956392 0.917925279 0.909150592 1.001009904 1.136378009 0.983341936 1 16.43678967 -4.740035444 23.70023523 1.024735915 0.959633325 0.063676468 0.072857955 2874.054651 3182073.091 0.019745602 0.815695568 1.82E-05 4.740035444 -0.06510259 SGIETFS(ph)PPPPPPK ddPTM_A459_MK2206_30min_R1 2 SGIETFSPPPPPPK 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 SGIET(0.004)FS(0.996)PPPPPPK;SGIET(0.011)FS(0.989)PPPPPPK 132.06 0.00083892 34105000 15689.1 15864.6 15056.8 12550 14137.3 13425.3 14306.4 14089.6 13357.6 12201.7 TRUE FALSE 14354.65966 14831.81166 14034.78637 13516.60317 13574.1814 14185.42888 13352.04616 13966.41611 14746.17032 13713.33871 1.046766215 1.081560951 1.02344051 0.98565371 0.989852412 1.034425619 0.973653932 1.018454835 1.075315839 1 13.74329224 -5.4110868 5.171004841 1.0099629 1.063453466 0.353081032 0.0282542 0.232693941 8.993303055 0.007550778 0.016117819 3.88E-06 5.4110868 0.053490566 SGIETFS(ph)PPPPPPK ddPTM_A459_MK2206_30min_R2 3 SGIETFSPPPPPPK 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 S(0.002)GIET(0.104)FS(0.895)PPPPPPK;S(0.002)GIET(0.136)FS(0.862)PPPPPPK;S(0.007)GIET(0.029)FS(0.964)PPPPPPK 94.023 0.013693 43470900 181279 204770 188798 221804 210234 182238 218267 177626 181833 191123 TRUE FALSE 195157.8596 194601.4196 195092.4311 203681.9037 201979.1568 189173.1948 189608.2807 200842.3281 197648.5057 184886.6722 1.055553964 1.052544336 1.055200079 1.10165812 1.092448441 1.023184595 1.025537852 1.086299654 1.069025167 1 17.4962817 -10.86909209 9.482894273 0.999999961 1.062389109 0.36279807 0.024802621 2.24E-08 1.51E-09 0.026042354 0.006316195 1.35E-11 10.86909209 0.062389148 SGIIPTS(ph)PTPYTYNK ddPTM_A459_MK2206_30min_R2 2 SGIIPTSPTPYTYNK 15 0 R4GN33;Q8IW41-2;Q8IW41;F8VRP2 R4GN33 MAPKAPK5 MAP kinase-activated protein kinase 5 1 SGIIPT(0.005)S(0.987)PT(0.008)PYTYNK;SGIIPT(0.098)S(0.875)PT(0.024)PYT(0.002)YNK 154.81 0.00018095 4429700 50354 53978 61091 60568 54300 49348 54592 38570 41821 54531 TRUE FALSE 54209.14096 51297.53101 63127.74345 55619.40065 52167.90916 51225.97272 47424.00482 43611.23143 45458.51498 52751.65794 1.027629141 0.972434479 1.196696861 1.054363082 0.98893402 0.971077967 0.899005011 0.826727218 0.861745711 1 15.68692882 -6.842338139 1.540557574 0.882008237 1.062851396 0.528143376 0.068488607 0.294115831 1.444957321 0.032291629 0.027415529 1.44E-07 6.842338139 0.180843159 SGITS(ph)PVEK ddPTM_A459_MK2206_30min_R2 1 SGITSPVEK 9 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 S(0.01)GIT(0.025)S(0.965)PVEK 111.27 0.010373 16313000 172240 174900 161340 153520 154210 111800 170260 151990 113550 200220 TRUE FALSE 185426.8268 166214.7203 166718.9951 140976.9249 148154.9406 116054.6273 147904.6575 171855.6149 123426.3737 193686.8378 0.957353783 0.858162187 0.860765744 0.72786012 0.764920024 0.599186959 0.763627819 0.887285976 0.63724709 1 17.56336639 -5.305851698 1.529887137 0.757108007 0.941982532 0.209707633 0.110215453 0.73453856 2.881463592 0.031957753 0.150567292 4.94E-06 5.305851698 0.184874525 SGKNS(ph)QEDSEDSEDKDVK ddPTM_A459_MK2206_30min_R1 1 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 S(0.025)GKNS(0.974)QEDS(0.001)EDSEDKDVK 108.69 0.0016969 6078700 514.2 998.41 1071.6 951.22 326.06 455.52 640.3 625.53 719.47 734.52 TRUE FALSE 470.4645898 933.4133275 998.8627776 1024.483129 313.0723398 481.3111487 597.5867553 620.0610572 794.2614811 825.5178829 0.56990236 1.130700312 1.20998321 1.241018699 0.379243559 0.583041456 0.723893168 0.751117656 0.96213722 1 9.689155658 -6.24520649 24.88604869 0.712817549 1.056821223 0.275917937 0.239639855 973.1012708 1491825.494 0.07264168 0.093488749 5.69E-07 6.24520649 0.344003673 SGKNS(ph)QEDSEDSEDKDVK ddPTM_A459_MK2206_30min_R2 1 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 S(0.043)GKNS(0.957)QEDSEDSEDKDVK 130.83 0.0010418 0 5567.7 3298.6 5433.9 4819.1 4313.1 2144.7 7368.4 5548.9 3695.7 7606.7 TRUE FALSE 5993.967393 3134.796321 5615.063514 4425.364114 4143.746022 2226.318061 6400.920229 6274.160282 4017.145306 7358.494002 0.814564419 0.426010583 0.763072378 0.601395355 0.563124197 0.302550775 0.86986824 0.852641897 0.545919492 1 12.84519482 -9.302127391 0.485557226 1.027021066 0.601066518 0.265529658 0.179295575 4.106895528 1.431962687 0.44778084 0.096365164 4.99E-10 9.302127391 -0.425954548 SGLCSPS(ph)YVAVTPFSLR ddPTM_A459_MK2206_30min_R2 1 SGLCSPSYVAVTPFSLR 17 0 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1 H0YBT0 MYC Myc proto-oncogene protein 1 S(0.119)GLCS(0.219)PS(0.661)YVAVTPFSLR 162.26 1.69E-05 10345000 18387 25579 21213 23153 28985 24583 25697 18310 20939 20122 TRUE FALSE 19794.72286 24308.78406 21920.23083 21261.32584 27846.90326 25518.52329 22322.95303 20703.17987 22760.23637 19465.42079 1.016917285 1.248818832 1.126111327 1.092261301 1.430583164 1.310966948 1.146800435 1.063587584 1.169265058 1 14.24862591 -8.344802648 1.05491416 1.018326349 1.201998766 0.181695971 0.116288739 0.865575539 2.043945189 0.115715137 0.038680014 4.52E-09 8.344802648 0.183672417 SGLEPAS(ph)SPSK ddPTM_A459_MK2206_30min_R1 2 SGLEPASSPSK 11 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SGLEPAS(0.566)S(0.372)PS(0.062)K;SGLEPAS(0.496)S(0.496)PS(0.009)K 158.3 0.00057146 191898000 22819 23095 22224 17349.9 16732.5 16034 20967 17636.3 24246 27259 TRUE FALSE 20878.12422 21591.5113 20715.4968 18686.1923 16066.00909 16941.83122 19568.32969 17482.10769 26766.45847 30636.05071 0.68148876 0.70477463 0.676180393 0.60994129 0.524415149 0.553003107 0.638735386 0.570638424 0.873691544 1 14.90294271 -8.420994531 3.570319012 0.996552715 0.619718894 0.839570726 0.056551513 0.090786113 2.062691992 0.061797361 0.016369706 3.79E-09 8.420994531 -0.376833822 SGLEPAS(ph)SPSK ddPTM_A459_MK2206_30min_R2 2 SGLEPASSPSK 11 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SGLEPAS(0.943)S(0.055)PS(0.002)K;SGLEPAS(0.937)S(0.063)PSK 152.38 0.00057931 274628000 838480 659340 713250 672290 658710 415550 829540 655230 492150 764070 TRUE FALSE 902674.6735 626598.1344 737029.399 617361.7565 632845.7356 431364.0464 720620.4015 740870.8107 534956.3174 739138.4585 1.221252477 0.847741214 0.997146598 0.835245074 0.85619376 0.583603845 0.97494643 1.002343745 0.723756573 1 19.49548512 -2.622893812 1.444185628 0.859088881 199.9943516 0.383862341 0.131009291 840.1087619 4.154310417 0.03688681 551853.1112 0.002382902 2.622893812 199.1352627 SGLEPAS(ph)SPSKGSEPR ddPTM_A459_MK2206_30min_R1 2 SGLEPASSPSKGSEPR 16 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SGLEPAS(0.753)S(0.247)PSKGSEPR;SGLEPAS(0.718)S(0.281)PSKGSEPR 244.54 2.56E-21 12832000 5574.9 5105.4 5017.2 4553.7 3800.5 4101.8 4300.4 3804.6 5324.3 4525.8 TRUE FALSE 5100.72548 4773.037532 4676.646443 4904.426763 3649.118037 4334.040371 4013.528163 3771.336783 5877.780038 5086.490272 1.002798631 0.938375437 0.919425024 0.964206457 0.717413745 0.852068939 0.78905649 0.741441855 1.155566948 1 12.31245481 SGLEPAS(ph)SPSKGSEPR ddPTM_A459_MK2206_30min_R2 1 SGLEPASSPSKGSEPR 16 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SGLEPAS(0.869)S(0.13)PSKGSEPR 258.12 2.79E-38 10965000 40100 37146 41561 36238 34732 27898 44847 36589 32802 48131 TRUE FALSE 43170.08683 35301.38366 42946.623 33277.23948 33368.24717 28959.67794 38958.53503 41371.30793 35655.05867 46560.48941 0.927182841 0.75818326 0.92238341 0.71470983 0.716664442 0.621979672 0.8367295 0.888549679 0.765779293 1 15.5068186 -9.808541644 9.874028904 0.999999988 0.791637845 0.298407426 0.094341247 0 0 0.09472179 0.022973409 1.55E-10 9.808541644 -0.208362143 SGLEPASS(ph)PSK ddPTM_A459_MK2206_30min_R1 1 SGLEPASSPSK 11 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SGLEPAS(0.152)S(0.845)PS(0.003)K 105.36 0.01174 44016000 9921.1 10919 9907.2 8649.1 8201.4 7516.6 9106.9 8352.8 10617 10290 TRUE FALSE 9077.258347 10208.17112 9234.726867 9315.255181 7874.720871 7942.183396 8499.395317 8279.77235 11720.67514 11564.80289 0.784903853 0.882693049 0.79852004 0.805483264 0.680921322 0.686754757 0.734936462 0.715945826 1.013478159 1 13.49745306 -8.267087344 24.91506656 1.006739131 0.761992819 0.742142059 0.057875453 266.082739 1173760.464 0.058045408 0.016651637 5.41E-09 8.267087344 -0.244746312 SGLEPASS(ph)PSK ddPTM_A459_MK2206_30min_R2 2 SGLEPASSPSK 11 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SGLEPAS(0.021)S(0.89)PS(0.089)K;SGLEPAS(0.332)S(0.65)PS(0.018)K 130.56 0.0023697 283994000 862980 765110 757050 695700 658480 471570 825820 639280 458260 772100 TRUE FALSE 929050.4123 727115.75 782289.6692 638859.0846 632624.7666 489515.9268 717388.842 722836.091 498118.6265 746906.4402 1.243864509 0.97350312 1.04737304 0.855340174 0.846993321 0.655391225 0.960480193 0.967773274 0.666908999 1 19.51056801 -4.175784163 0.765379131 0.844999843 1.918527328 0.489914049 0.119048941 5.19779679 1.202362107 0.044984942 5.927572991 6.67E-05 4.175784163 1.073527485 SGLEPASS(ph)PSKGSEPR ddPTM_A459_MK2206_30min_R1 2 SGLEPASSPSKGSEPR 16 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SGLEPASS(0.981)PS(0.018)KGSEPR;SGLEPAS(0.208)S(0.791)PS(0.001)KGSEPR 224.36 1.16E-10 12305200 8502.8 8515.1 8945.8 6299.8 5847.7 6492.6 7821 6690.8 8072.1 7925.8 TRUE FALSE 7779.59221 7960.765442 8338.58402 6785.011688 5614.773726 6860.205401 7299.27536 6632.303041 8911.223681 8907.707941 0.873355106 0.893694034 0.936108826 0.761701184 0.63032755 0.770142605 0.81943362 0.744557757 1.000394685 1 13.12083854 -10.19149344 7.412007414 0.999995031 0.818973875 0.209430787 0.100977516 0 0 0.103600237 0.025126748 6.43E-11 10.19149344 -0.181021156 SGLEPASS(ph)PSKGSEPR ddPTM_A459_MK2206_30min_R2 2 SGLEPASSPSKGSEPR 16 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SGLEPAS(0.06)S(0.93)PS(0.009)KGSEPR;SGLEPAS(0.011)S(0.974)PS(0.011)KGS(0.003)EPR 137.27 0.0019353 11570000 45820.1 44949.2 41065.2 41362.8 43401.8 31866.8 53349 37796.9 34625.4 48645 TRUE FALSE 49328.12209 42717.08809 42434.29327 37983.32693 41697.62726 33079.5134 46344.21222 42737.08461 37637.0547 47057.71763 1.048247228 0.907759455 0.901749923 0.807164666 0.886095403 0.70295618 0.984837654 0.90818439 0.799806208 1 15.52214373 -4.557717476 1.619862338 0.865761441 1.208769258 0.278289371 0.083539504 2.395584398 3.895230801 0.022493324 1.538104215 2.77E-05 4.557717476 0.343007817 SGLLSTFGGS(ph)TGR ddPTM_A459_MK2206_30min_R1 1 SGLLSTFGGSTGR 13 0 Q9P212-2;Q9P212 Q9P212-2 PLCE1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1" 1 SGLLSTFGGS(0.5)T(0.5)GR 106.54 0.0069233 6871200 2437 2482.8 2526.9 2472.5 2011.4 1740.3 2252.9 1886.8 2158.5 3249.5 TRUE FALSE 2229.720353 2321.169269 2355.381068 2662.932378 1931.281679 1838.834282 2102.613152 1870.303907 2382.883799 3652.072592 0.610535606 0.635575885 0.644943661 0.729156475 0.528817988 0.503504308 0.575731478 0.51212123 0.65247438 1 11.83449973 -8.561121124 20.21203744 1.000000002 0.593858898 0.777273987 0.065067218 629.5462514 332730.8367 0.069110405 0.01784423 2.75E-09 8.561121124 -0.406141103 SGLNGS(ph)ILAER ddPTM_A459_MK2206_30min_R2 2 SGLNGSILAER 11 0 Q96H22-5;Q96H22-4;Q96H22;Q96H22-3 Q96H22-5 CENPN Centromere protein N 1 S(0.002)GLNGS(0.998)ILAER;S(0.171)GLNGS(0.829)ILAER 92.457 0.024981 11716700 27758 31017 31380 34253 33226 32266 32513 24196 34302 28225 TRUE FALSE 29883.17382 29476.74088 32426.19354 31454.42033 31921.38029 33493.90524 28244.00404 27358.50028 37285.52596 27304.02056 1.094460567 1.079575106 1.187597756 1.152006909 1.169109151 1.226702315 1.034426559 1.0019953 1.36556907 1 14.73682579 -9.840958836 12.82238694 1.000009406 1.140757097 0.162289638 0.098741619 0 0 0.093316925 0.022632679 1.44E-10 9.840958836 0.140747691 SGLQLSLEQGTGENS(ph)FR ddPTM_A459_MK2206_30min_R1 1 SGLQLSLEQGTGENSFR 17 0 P23497-5;P23497-2;P23497-3;P23497;P23497-4;E9PHV6;P23497-7;P23497-6;C9JBL0 P23497-5 SP100 Nuclear autoantigen Sp-100 1 SGLQLSLEQGT(0.006)GENS(0.994)FR 97.271 0.010004 0 2157.6 1362.9 2522.2 1793.4 2093 2108 2174.6 1901.4 1465.8 1749.5 TRUE FALSE 1974.08479 1274.174962 2351.000091 1931.527979 2009.631378 2227.353138 2029.536402 1884.77626 1618.175155 1966.241268 1.003989094 0.648025745 1.195682407 0.982345356 1.022067541 1.132797472 1.032190929 0.958568153 0.82297894 1 10.94122464 -5.261900811 24.99999658 1.020280777 0.826007434 0.280779079 0.123090473 48.92523646 2650905.439 0.031095736 0.071855212 5.47E-06 5.261900811 -0.194273343 SGLS(ph)DIILGK ddPTM_A459_MK2206_30min_R1 1 SGLSDIILGK 10 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;K7EJR2;M0R330;M0QX30;M0R1V5 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 S(0.025)GLS(0.975)DIILGK 113.69 0.0074762 10015000 4484.5 4866.9 4244.6 4380.1 3878.8 3013.9 4021.1 3467.2 4349.6 3779.9 TRUE FALSE 4103.069726 4550.063925 3956.488378 4717.456061 3724.299183 3184.544413 3752.859756 3436.886636 4801.756485 4248.182549 0.965841199 1.0710613 0.931336715 1.110464536 0.87668059 0.749625134 0.8834036 0.809025176 1.130308415 1 12.05263005 -6.287755933 24.58821854 0.889459117 1.017036384 0.190084818 0.108657117 877.83361 820179.3532 0.033063551 0.037503396 5.16E-07 6.287755933 0.127577268 SGLS(ph)DIILGK ddPTM_A459_MK2206_30min_R2 1 SGLSDIILGK 10 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;K7EJR2;M0R330;M0QX30;M0R1V5 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 S(0.001)GLS(0.999)DIILGK 96.015 0.02215 1402100 10676 9948 8424.7 9590.1 11539 8507.2 11288 7622.6 8388.5 11142 TRUE FALSE 11493.36277 9453.996786 8705.575293 8806.558153 11085.92088 8830.947457 9805.872041 8618.899992 9118.116567 10778.43745 1.066329217 0.877121274 0.807684354 0.817053324 1.028527644 0.819316111 0.909767495 0.799642808 0.845959037 1 13.39586043 -4.762279569 6.86798764 0.871497035 1.070735783 0.350503036 0.076296679 0.119041251 30.88849428 0.0183838 0.111069793 1.73E-05 4.762279569 0.199238748 SGLS(ph)LEELR ddPTM_A459_MK2206_30min_R1 6 SGLSLEELR 9 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 S(0.001)GLS(0.999)LEELR;SGLS(1)LEELR;SGLS(1)LEELR;SGLS(1)LEELR;S(0.003)GLS(0.997)LEELR;SGLS(1)LEELR 163.84 0.00096456 42795700 10086.62 10764.96 10524.16 9513 11925.17 9665.81 10949.58 10335 9727.66 8705.13 TRUE FALSE 9228.700002 10064.15915 9809.809341 10245.69291 11450.16523 10213.07981 10219.1535 10244.64218 10738.88507 9783.587225 0.943283868 1.028677817 1.002680215 1.047232745 1.170344268 1.043899295 1.044520099 1.047125349 1.097642901 1 13.25614782 -4.739013192 1.009011332 1.066710589 0.884340845 0.377064302 0.045244428 2.234826038 1.724619028 0.015226392 0.452933092 1.82E-05 4.739013192 -0.182369744 SGLS(ph)LEELR ddPTM_A459_MK2206_30min_R2 2 SGLSLEELR 9 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 S(0.003)GLS(0.997)LEELR;SGLS(1)LEELR 108.31 0.012082 11351200 42808 52935 48579 59944 50672 61209 55135 45520 46406 45720 TRUE FALSE 46085.41339 50306.32487 50198.59961 55046.38345 48682.36267 63538.35139 47895.70827 51469.62029 50442.31 44228.16014 1.041992551 1.137427483 1.134991812 1.244600347 1.10070965 1.436603991 1.082923371 1.163729627 1.140502111 1 15.43267761 -8.941943094 1.257839646 1.000165387 1.174004184 0.188801852 0.10379958 2.714322258 6.250106413 0.098558957 0.029629441 1.14E-09 8.941943094 0.173838797 SGLSSALGEMVS(ph)PR ddPTM_A459_MK2206_30min_R1 1 SGLSSALGEMVSPR 14 0 Q1MSJ5;Q1MSJ5-1;Q1MSJ5-2 Q1MSJ5 CSPP1 Centrosome and spindle pole-associated protein 1 1 SGLSSALGEMVS(1)PR 98.654 0.010243 5636900 978.11 924.75 962.96 739.2 865.48 970.67 956.98 844.84 744.51 794.07 TRUE FALSE 894.9166082 864.5486069 897.5969582 796.1333121 831.0060989 1025.628497 893.1416103 837.453653 821.9044788 892.4453865 1.002769045 0.968741191 1.005772422 0.892080708 0.931156249 1.149233905 1.00078013 0.938380842 0.920957732 1 9.801620075 -4.742075772 21.83588379 0.979334814 1.002769406 0.011318831 0.067515473 2107.465705 2375897.42 0.017805198 0.505810028 1.81E-05 4.742075772 0.023434592 SGLTVPT(ph)SPK ddPTM_A459_MK2206_30min_R1 2 SGLTVPTSPK 10 0 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 SGLTVPT(0.608)S(0.392)PK;SGLTVPT(0.5)S(0.5)PK 133.42 0.005318 35873000 22361.5 25653 24495.7 21803.9 17150.1 13938.5 18611.7 18260.3 24013 21519.6 TRUE FALSE 20459.537 23982.98504 22833.00013 23483.24016 16466.9752 14727.68582 17370.14745 18100.65212 26509.23728 24185.61051 0.845938414 0.991622065 0.944073755 0.970959164 0.680858364 0.608944141 0.718201736 0.748405839 1.096074762 1 14.56186134 -6.244242661 24.43820558 0.781650309 0.942391158 0.148843999 0.142899429 985.2946126 1400197.871 0.043176458 0.055592304 5.70E-07 6.244242661 0.16074085 SGLTVPT(ph)SPK ddPTM_A459_MK2206_30min_R2 5 SGLTVPTSPK 10 0 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 SGLTVPT(0.5)S(0.5)PK;SGLTVPT(0.96)S(0.04)PK;SGLTVPT(0.603)S(0.397)PK;SGLTVPT(0.965)S(0.035)PK;SGLTVPT(0.928)S(0.072)PK 179.94 0.00018619 544470000 5094630 4735920 4573820 4295730 3852010 2817560 5014350 4019390 2934000 4531880 TRUE FALSE 5484678.79 4500741.099 4726308.876 3944755.118 3700760.733 2924784.22 4355959.822 4544738.074 3189194.017 4384005.127 1.251065779 1.0266277 1.078080143 0.899806228 0.84415064 0.667148905 0.993602812 1.036663494 0.727461288 1 22.06381805 -5.085780321 1.042018109 0.876262581 1.294457501 0.472439667 0.118910324 1.103359555 1.367128383 0.041208259 0.458644223 8.21E-06 5.085780321 0.418194919 SGLTVPTS(ph)PK ddPTM_A459_MK2206_30min_R1 1 SGLTVPTSPK 10 0 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 SGLTVPT(0.176)S(0.824)PK 126.03 0.0035263 171090000 9207.3 11347 11205 8627.3 8027.9 5276.4 8008.8 8348.6 10307 8511.9 TRUE FALSE 8424.170786 10608.30824 10444.43582 9291.776141 7708.131744 5575.145208 7474.547565 8275.60907 11378.44953 9566.418434 0.880598193 1.108911168 1.091781202 0.971291001 0.805748964 0.582782914 0.781331866 0.865068691 1.189415831 1 13.22376318 -6.083770975 4.446296213 0.846127946 1.03520853 0.157960907 0.158084372 0.362400018 12.81274207 0.050042017 0.06685869 8.25E-07 6.083770975 0.189080584 SGLTVPTS(ph)PK ddPTM_A459_MK2206_30min_R2 1 SGLTVPTSPK 10 0 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 SGLTVPT(0.258)S(0.742)PK 87.667 0.033331 15244000 181060 177830 170360 174940 147960 131340 184690 162690 104150 188170 TRUE FALSE 194922.0928 168999.2208 176039.7174 160646.8424 142150.347 136338.2357 160439.9811 183954.1416 113208.7787 182030.0283 1.070823834 0.928413968 0.967091633 0.882529349 0.780917018 0.748987609 0.881392936 1.010570307 0.621923645 1 17.47381694 -5.234097196 1.083689269 0.84033115 1.068084225 0.268109668 0.111716827 1.27914494 2.021251273 0.036959529 0.281242291 5.83E-06 5.234097196 0.227753074 SGMNS(ph)PLR ddPTM_A459_MK2206_30min_R2 1 SGMNSPLR 8 0 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 S(0.018)GMNS(0.982)PLR 80.916 0.044991 37456000 137940 143350 134370 153240 128880 139540 150720 134740 127760 146930 TRUE FALSE 148500.7925 136231.4475 138849.8287 140719.8018 123819.5236 144850.2925 130930.283 152350.9806 138872.3339 142135.6861 1.044781902 0.958460547 0.976882249 0.990038502 0.871136074 1.019098697 0.921164041 1.071870019 0.977040585 1 17.11690929 -7.756613631 24.99999742 1.018341472 0.967703933 0.155393206 0.050645584 202.778697 1050521.373 0.023562504 0.013022936 1.75E-08 7.756613631 -0.050637539 SGMS(ph)PEQSR ddPTM_A459_MK2206_30min_R2 4 SGMSPEQSR 9 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.002)GMS(0.997)PEQSR;S(0.083)GMS(0.917)PEQSR;S(0.056)GMS(0.922)PEQS(0.022)R;SGMS(1)PEQSR 108.31 0.0434 240254800 1075433.3 1447864 1202726.4 1441980.1 1401749 1351122.8 1404905 1052472 1254074 1215180 TRUE FALSE 1157769.3 1375965.179 1242824.698 1324165.713 1346709.291 1402540.725 1220439.286 1190033.704 1363151.09 1175528.776 0.984892351 1.170507441 1.057247362 1.126442619 1.145620012 1.193114753 1.038204518 1.012339067 1.159606738 1 20.16487842 -10.64087603 4.158019996 0.99997871 1.100217657 0.15803363 0.068235884 47965068.82 0.559567426 9898.918753 0.016290835 2.29E-11 10.64087603 0.100238947 SGNQVSEFISNTFLDKQHEVEIPS(ph)PTQK ddPTM_A459_MK2206_30min_R1 2 SGNQVSEFISNTFLDKQHEVEIPSPTQK 28 1 A0A1B0GW84;Q08499-11;Q08499-2;Q08499-10;A0A087WSZ7;Q08499;Q08499-3;Q08499-5;Q08499-8;D6RHE0;Q08499-6;Q08499-9;Q08499-4 A0A1B0GW84;Q08499-6;Q08499-9;Q08499-4 PDE4D "cAMP-specific 3,5-cyclic phosphodiesterase 4D" 1 SGNQVS(0.001)EFIS(0.004)NT(0.004)FLDKQHEVEIPS(0.707)PT(0.284)QK;SGNQVSEFISNTFLDKQHEVEIPS(0.896)PT(0.103)QK 59.661 0.0020165 31292000 9260.5 9229.9 10601.6 10527.7 10581 7860.5 7931.4 10546.9 6243.4 4926.3 TRUE FALSE 8472.845846 8629.031832 9881.99293 11338.54528 10159.53636 8305.554717 7402.310778 10454.68957 6892.423772 5536.607236 1.530331751 1.558541443 1.784846298 2.047922996 1.834975091 1.500116292 1.336975961 1.888284489 1.244882196 1 12.43478647 -6.857298716 5.430619303 1.439448748 1.758146845 0.331999682 0.250250508 0.297807905 13.66082249 0.090713302 0.080221975 1.39E-07 6.857298716 0.318698096 SGNS(ph)DSIER ddPTM_A459_MK2206_30min_R1 1 SGNSDSIER 9 0 A0A5F9ZI51;A0A5F9ZGW5;C9J8U3;A0A0A0MRW7;Q7Z2E3-13;Q7Z2E3-4;Q7Z2E3-5;Q7Z2E3-9;Q7Z2E3-10;Q7Z2E3-11;Q7Z2E3-8;Q7Z2E3-7;Q7Z2E3 A0A5F9ZI51 APTX Aprataxin 1 S(0.139)GNS(0.86)DSIER 100.02 0.018287 11438000 1869.2 1580.3 1318.7 1452.1 1148 1328.4 2047.7 2317.8 453.29 1664.4 TRUE FALSE 1710.214724 1477.422183 1229.190318 1563.940994 1102.272729 1403.61286 1911.101669 2297.535719 500.4111176 1870.598438 0.914260747 0.789812582 0.657110737 0.836064525 0.589262082 0.750354984 1.021652553 1.228235667 0.267513918 1 10.86928417 -7.194845243 15.68627073 0.898366046 0.74920844 0.054424611 0.245523615 12.61821502 2969.816628 0.091008606 0.070494758 6.38E-08 7.194845243 -0.149157606 SGNS(ph)DSIER ddPTM_A459_MK2206_30min_R2 1 SGNSDSIER 9 0 A0A5F9ZI51;A0A5F9ZGW5;C9J8U3;A0A0A0MRW7;Q7Z2E3-13;Q7Z2E3-4;Q7Z2E3-5;Q7Z2E3-9;Q7Z2E3-10;Q7Z2E3-11;Q7Z2E3-8;Q7Z2E3-7;Q7Z2E3 A0A5F9ZI51 APTX Aprataxin 1 S(0.049)GNS(0.756)DS(0.195)IER 81.709 0.043187 62703000 19307 19996 26859 22851 35355 28743 38843 36364 39598 43367 TRUE FALSE 20785.15876 19003.02772 27754.46565 20984.0002 33966.78506 29836.83501 33742.86744 41116.89966 43042.16246 41951.93834 0.49545169 0.452971387 0.661577671 0.500191434 0.809659491 0.711214694 0.804322012 0.980095349 1.025987455 1 15.35644985 -6.875373982 0.539761828 1.046409547 0.461019641 0.867609946 0.074792091 0.309491881 0.193620188 0.065162225 0.072910211 1.33E-07 6.875373982 -0.585389906 down SGNTPNS(ph)PR ddPTM_A459_MK2206_30min_R2 2 SGNTPNSPR 9 0 Q96EA4-2;Q96EA4-3;Q96EA4 Q96EA4-2 SPDL1 Protein Spindly 1 SGNTPNS(1)PR;SGNT(0.002)PNS(0.998)PR 84.605 0.036275 26368500 24408.7 13620.6 14173.5 17908 28464 14160 19072.8 54031 41208 27460.2 TRUE FALSE 26277.44884 12944.22081 14646.03742 16444.85912 27346.36034 14698.86872 16568.51845 61093.03722 44792.19735 26564.17592 0.98920625 0.487281098 0.551345446 0.61906152 1.029445085 0.553334264 0.623716636 2.299828061 1.686188101 1 14.69719434 -7.743890003 24.99999499 1.744756029 0.684639718 0.626971145 0.340561316 127.3255625 181382.3438 0.152815948 0.087975409 1.80E-08 7.743890003 -1.060116311 SGPEAEGLGSETSPTVDDEEEMLYGDS(ph)GSLFSPSKEEAR ddPTM_A459_MK2206_30min_R1 1 SGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEAR 39 1 Q10570 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 1 SGPEAEGLGSET(0.001)S(0.009)PT(0.143)VDDEEEMLY(0.037)GDS(0.261)GS(0.261)LFS(0.261)PS(0.027)KEEAR 67.276 4.38E-06 6039600 2448.4 2192.7 2024.5 2254.9 1899.4 2103 1944.4 1966.4 1942.9 2335.4 TRUE FALSE 2240.150723 2049.954831 1887.082581 2428.572789 1823.742876 2222.070043 1814.692624 1949.207972 2144.871408 2624.726983 0.853479519 0.781016405 0.718963379 0.92526682 0.694831458 0.846590924 0.691383384 0.742632656 0.817178861 1 11.35795165 -8.568578247 15.29963003 1.000000003 0.780635906 0.453430869 0.071519694 76.68393127 25673.88449 0.065628385 0.016945366 2.70E-09 8.568578247 -0.219364097 SGPEAEGLGSETSPTVDDEEEMLYGDSGS(ph)LFSPSKEEAR ddPTM_A459_MK2206_30min_R1 1 SGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEAR 39 1 Q10570 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 1 SGPEAEGLGSET(0.001)S(0.004)PT(0.093)VDDEEEMLY(0.086)GDS(0.079)GS(0.361)LFS(0.361)PS(0.014)KEEAR 65.736 7.37E-06 7172500 391.38 388.33 294.25 265.76 342.58 227.63 325.82 187.84 409.45 434.16 TRUE FALSE 358.0910758 363.0496464 274.2771298 286.2288812 328.9343132 240.5182139 304.0851423 186.1977347 452.0137927 487.9470185 0.733872864 0.744034972 0.562104326 0.586598279 0.674118912 0.492918708 0.623192951 0.381594164 0.926358345 1 8.930580698 -8.414317978 6.324800403 0.997471557 0.603276914 0.668131464 0.102965385 0.131186205 6.101342607 0.100438432 0.026023529 3.85E-09 8.414317978 -0.394194642 SGPEAEGLGSETSPTVDDEEEMLYGDSGS(ph)LFSPSKEEARR ddPTM_A459_MK2206_30min_R1 1 SGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARR 40 2 Q10570 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 1 SGPEAEGLGS(0.001)ET(0.002)S(0.002)PT(0.026)VDDEEEMLY(0.023)GDS(0.097)GS(0.41)LFS(0.341)PS(0.097)KEEARR 61.372 1.33E-05 7059400 1174.4 1123.4 1078.3 1570.1 1378.6 851.23 619.68 1356.9 479.48 134.22 TRUE FALSE 1074.511113 1050.266456 1005.108 1691.029374 1323.687443 899.425907 578.3422779 1345.036766 529.3236618 150.8481869 7.123129121 6.96240689 6.663043295 11.21014053 8.77496422 5.962457524 3.833935891 8.916492759 3.508982592 1 7.236953546 -8.683668506 0.561926246 0.822098101 7.947502351 0.541241642 1.919485442 0.938584097 0.661053465 2.316428422 0.964171899 2.07E-09 8.683668506 7.12540425 SGPEAEGLGSETSPTVDDEEEMLYGDSGSLFS(ph)PSKEEAR ddPTM_A459_MK2206_30min_R1 1 SGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEAR 39 1 Q10570 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 1 SGPEAEGLGSETSPT(0.009)VDDEEEMLY(0.005)GDS(0.317)GS(0.317)LFS(0.334)PS(0.018)KEEAR 108.2 2.96E-19 7502200 2082.8 1899.8 1897.5 1794.4 1509.7 1379.2 1642.5 1996 1878.3 2036.8 TRUE FALSE 1905.646923 1776.122675 1768.702987 1932.604999 1449.565452 1457.289112 1532.931822 1978.549182 2073.556007 2289.134161 0.832474983 0.775892783 0.772651519 0.844251522 0.633237438 0.636611491 0.669655736 0.864322073 0.905825461 1 11.1605863 -8.113456148 2.329685449 0.968217021 0.737792752 0.580331945 0.074075354 0.24488209 2.380581912 0.071087613 0.022289753 7.70E-09 8.113456148 -0.230424269 SGPIS(ph)PGIHSCDLTVEGLATVTR ddPTM_A459_MK2206_30min_R1 2 SGPISPGIHSCDLTVEGLATVTR 23 0 Q9BUB4-2;Q9BUB4 Q9BUB4-2 ADAT1 tRNA-specific adenosine deaminase 1 1 S(0.005)GPIS(0.995)PGIHSCDLTVEGLATVTR;S(0.037)GPIS(0.963)PGIHSCDLTVEGLATVTR 139.7 2.10E-06 26617000 4849.5 4866.9 4773.6 3959.7 4588.8 4235.9 4399 3989.6 3559.8 3336.8 TRUE FALSE 4437.024559 4550.063925 4449.581332 4264.67678 4406.018379 4475.732997 4105.550736 3954.719348 3929.853949 3750.187976 1.183147242 1.213289562 1.186495547 1.137190138 1.174879341 1.193468975 1.094758653 1.054538965 1.047908525 1 11.8727472 -7.565371815 1.605909534 1.026083668 1.182565391 0.898737615 0.022411756 0.124168479 0.61942696 0.016341661 0.007595258 2.72E-08 7.565371815 0.156481723 SGPIS(ph)PGIHSCDLTVEGLATVTR ddPTM_A459_MK2206_30min_R2 1 SGPISPGIHSCDLTVEGLATVTR 23 0 Q9BUB4-2;Q9BUB4 Q9BUB4-2 ADAT1 tRNA-specific adenosine deaminase 1 1 S(0.013)GPIS(0.987)PGIHSCDLTVEGLATVTR 127.94 5.94E-06 7648900 19109 19674 16052 24369 17131 18252 18722 12778 16870 15734 TRUE FALSE 20571.99973 18697.01777 16587.16567 22377.97475 16458.35086 18946.59265 16263.77891 14448.12847 18337.32211 15220.60087 1.351589199 1.22840208 1.089783893 1.470242531 1.081320705 1.244799257 1.068537244 0.949248233 1.204769921 1 13.89373769 -7.08130398 1.500291121 1.047551005 1.255727955 0.356647676 0.12310141 0.458658318 2.06494794 0.06292513 0.043612298 8.29E-08 7.08130398 0.20817695 SGPKPFSAPKPQT(ph)SPSPK ddPTM_A459_MK2206_30min_R1 1 SGPKPFSAPKPQTSPSPK 18 2 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 SGPKPFSAPKPQT(0.897)S(0.069)PS(0.033)PK 77.027 0.045844 346540000 3513.6 4730 4024.6 3979 2908.1 2334.6 3008.7 3455.3 3298.1 2743.3 TRUE FALSE 3214.749869 4422.07614 3751.421365 4285.463269 2792.264219 2466.783034 2807.995113 3425.090676 3640.949297 3083.160715 1.042679953 1.434267153 1.216745318 1.389957795 0.905649908 0.800082533 0.910752106 1.110902413 1.180914534 1 11.59019438 -6.26602833 24.99192192 0.977332071 1.278711655 0.498848578 0.140325818 331.965847 1807920.078 0.044970396 0.052674131 5.42E-07 6.26602833 0.301379584 SGPKPFSAPKPQT(ph)SPSPK ddPTM_A459_MK2206_30min_R2 2 SGPKPFSAPKPQTSPSPK 18 2 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 SGPKPFSAPKPQT(0.987)S(0.012)PS(0.001)PK;SGPKPFSAPKPQT(0.943)S(0.055)PS(0.003)PK 110.98 0.0043519 860780000 865730 1049570 1092120 989000 971790 682498 1077010 888440 822318 1081920 TRUE FALSE 932010.9544 997449.88 1128530.736 908195.5363 933632.6417 708470.9396 935597.2933 1004562.158 893841.7332 1046617.039 0.890498549 0.95302278 1.078265205 0.867743886 0.892048005 0.676915159 0.89392515 0.959818273 0.854029411 1 19.99730222 -5.878611073 23.40566565 0.868994069 0.972062971 0.187038634 0.090542275 7.377627525 1451.430351 0.026166828 0.038811711 1.32E-06 5.878611073 0.103068902 SGPPS(ph)PPSTATSFGGPRPR ddPTM_A459_MK2206_30min_R1 3 SGPPSPPSTATSFGGPRPR 19 1 A0A087X0E3;A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A087X0E3;A0A0A0MS59 SRCAP Helicase SRCAP 1 SGPPS(0.932)PPS(0.068)TATSFGGPRPR;SGPPS(0.796)PPS(0.202)T(0.002)ATSFGGPRPR;S(0.002)GPPS(0.987)PPS(0.011)TATSFGGPRPR 166.21 3.70E-09 92578000 5944.5 5999.39 5617.3 4857.73 4736.09 4541.5 5084.4 5114.1 4843.29 4371.14 TRUE FALSE 5438.889059 5608.828621 5236.013327 5231.873206 4547.441506 4798.635805 4745.228953 5069.387963 5346.767327 4912.669824 1.107114717 1.141706816 1.065818285 1.064975542 0.925655839 0.976787771 0.965916523 1.031900808 1.088362849 1 12.26229156 -5.777837895 2.102469179 0.997916614 1.119386183 0.547269433 0.04391694 0.24497822 2.21082469 0.014233653 0.027123884 1.67E-06 5.777837895 0.121469569 SGPPS(ph)PPSTATSFGGPRPR ddPTM_A459_MK2206_30min_R2 2 SGPPSPPSTATSFGGPRPR 19 1 A0A087X0E3;A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A087X0E3;A0A0A0MS59 SRCAP Helicase SRCAP 1 SGPPS(0.997)PPS(0.002)TATSFGGPRPR;SGPPS(0.962)PPS(0.023)T(0.007)AT(0.007)S(0.002)FGGPRPR 152.9 6.93E-05 16540400 22494 26968 24852 27538 27905 26305 28262 18856.8 24416.8 26333 TRUE FALSE 24216.15793 25628.80834 25680.55328 25288.05731 26809.30949 27306.05521 24551.16545 21321.44851 26540.52913 25473.75637 0.950631606 1.006086734 1.008118038 0.992710182 1.05242859 1.071928883 0.963782691 0.836996641 1.041877325 1 14.6367241 SGPS(ph)PLSSPNGK ddPTM_A459_MK2206_30min_R1 1 SGPSPLSSPNGK 12 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 S(0.007)GPS(0.973)PLS(0.015)S(0.004)PNGK 90.689 0.024065 3181100 2419.3 2047.8 2800.9 2100.5 2644.5 2018.6 2540.3 2757.4 2501.6 1842.3 TRUE FALSE 2213.525831 1914.487848 2610.782712 2262.280874 2539.163965 2132.891388 2370.841222 2733.292343 2761.650272 2070.538033 1.069058281 0.924633027 1.26091995 1.092605322 1.226330512 1.030114566 1.145036307 1.320087967 1.33378389 1 11.01578999 -5.259791844 24.99501013 1.180028937 0.996845651 0.289111494 0.112305727 174.6209076 2649143.897 0.029302338 0.069550678 5.50E-06 5.259791844 -0.183183285 SGPS(ph)PLSSPNGK ddPTM_A459_MK2206_30min_R2 2 SGPSPLSSPNGK 12 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 S(0.001)GPS(0.999)PLSSPNGK;S(0.002)GPS(0.998)PLSSPNGK 177.36 0.00010365 48066000 240590 257040 247440 251180 246940 205790 285980 178592 194494 236790 TRUE FALSE 259009.7554 244275.7674 255689.5261 230657.7905 237243.8948 213621.4827 248430.4825 201934.5876 211410.7366 229063.5617 1.130733118 1.066410413 1.116238324 1.006959766 1.035712066 0.932586052 1.084548239 0.881565737 0.922934818 1 17.80538845 -6.049477879 0.61739296 0.948396433 1.132397604 0.520122259 0.055780235 0.862274105 0.633448596 0.035937214 0.092701296 8.92E-07 6.049477879 0.184001171 SGQGFHGNSEVNAILS(ph)PR ddPTM_A459_MK2206_30min_R1 4 SGQGFHGNSEVNAILSPR 18 0 Q8TB72-3;Q8TB72;C9JW01;Q8TB72-2;Q8TB72-4;A0A0A0MR59 Q8TB72-3 PUM2 Pumilio homolog 2 1 SGQGFHGNSEVNAILS(1)PR;SGQGFHGNSEVNAILS(1)PR;SGQGFHGNSEVNAILS(1)PR;SGQGFHGNSEVNAILS(1)PR 267.69 7.43E-54 76892000 6590.51 5134.23 5361.5 4669.93 5995.63 5992.81 7252.58 6576.43 6042 6102.31 TRUE FALSE 6029.952516 4799.990694 4997.576318 5029.608818 5756.811361 6332.117723 6768.773621 6518.932966 6670.087522 6858.310233 0.879218395 0.699879494 0.728689159 0.73335977 0.83939209 0.923276654 0.9869448 0.950515906 0.972555527 1 12.74363745 -6.677921648 2.053945149 0.972547469 0.753831315 0.814858179 0.046937715 0.12872519 1.114547331 0.017953494 0.017465536 2.10E-07 6.677921648 -0.218716154 SGQGFHGNSEVNAILS(ph)PR ddPTM_A459_MK2206_30min_R2 5 SGQGFHGNSEVNAILSPR 18 0 Q8TB72-3;Q8TB72;C9JW01;Q8TB72-2;Q8TB72-4;A0A0A0MR59 Q8TB72-3 PUM2 Pumilio homolog 2 1 SGQGFHGNSEVNAILS(1)PR;SGQGFHGNSEVNAILS(1)PR;SGQGFHGNSEVNAILS(1)PR;SGQGFHGNSEVNAILS(1)PR;SGQGFHGNSEVNAILS(1)PR 186.68 1.25E-10 141159300 62007.2 92406 72503.4 102650 105697 122834 121013 89283 108329 88656 TRUE FALSE 66754.51891 87817.25241 74920.62717 94263.16664 101546.8047 127508.5339 105123.8477 100952.5947 117751.2606 85763.16198 0.778358882 1.023950731 0.873575851 1.099110206 1.184037556 1.486751782 1.225745942 1.177109056 1.372981801 1 16.38807048 -6.02710682 2.159686275 1.264159312 0.900780306 0.575543104 0.133281409 0.216453317 2.016386219 0.041189073 0.063022071 9.39E-07 6.02710682 -0.363379007 SGRS(ph)PTGNTPPVIDSVSEK ddPTM_A459_MK2206_30min_R1 1 SGRSPTGNTPPVIDSVSEK 19 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.07)GRS(0.928)PT(0.002)GNTPPVIDSVSEK 191.97 1.43E-14 4762500 3849.9 3889.5 3939.9 3627.1 4392.5 3672.3 4324.3 3664.1 3848.5 3234.9 TRUE FALSE 3522.445788 3636.292843 3672.470565 3906.45987 4217.537424 3880.222452 4035.833837 3632.06516 4248.565347 3635.663834 0.968859044 1.000173011 1.010123799 1.074483244 1.160046037 1.067266565 1.110067933 0.999010174 1.168580359 1 11.82800309 -5.709204217 3.241581683 1.087231622 0.988532855 0.375413254 0.053653878 0.242503581 5.163212486 0.01455473 0.026182502 1.95E-06 5.709204217 -0.098698767 SGRS(ph)PTGNTPPVIDSVSEK ddPTM_A459_MK2206_30min_R2 1 SGRSPTGNTPPVIDSVSEK 19 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.07)GRS(0.789)PT(0.106)GNT(0.035)PPVIDSVSEK 111.58 0.0028869 4738300 18152 25122 25565 27243 30140 36507 31880 25700 27537 28482 TRUE FALSE 19541.73108 23874.47801 26417.32434 25017.15975 28956.55216 37896.29947 27694.11771 29059.07824 29932.11848 27552.63467 0.709250905 0.866504358 0.958794854 0.907977043 1.05095402 1.375414726 1.005135009 1.054675119 1.086361389 1 14.74990266 -5.323480104 0.886484779 1.101254885 0.680003095 0.551088102 0.109379039 0.922740078 0.967104839 0.044688373 0.32234385 4.75E-06 5.323480104 -0.421251789 SGS(ph)AAQAEGLCK ddPTM_A459_MK2206_30min_R1 2 SGSAAQAEGLCK 12 0 F8WF93;H7BZZ2;F8WE30;H7C0X4;Q92685 F8WF93 ALG3 "Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase" 1 S(0.017)GS(0.983)AAQAEGLCK;S(0.286)GS(0.714)AAQAEGLCK 107.11 0.0086209 11337000 3906.8 4767.5 3913.5 3876 4020.1 3519.4 4367 4780.1 5087.8 4516.6 TRUE FALSE 3574.506145 4457.134883 3647.862524 4174.530192 3859.970904 3718.665387 4075.685398 4738.30809 5616.695017 5076.150507 0.704176549 0.878054123 0.718627732 0.822381091 0.760413014 0.732575873 0.802908699 0.933445154 1.106487093 1 12.30951913 -7.906999644 2.69787263 1.050628712 0.773855152 0.812737441 0.054598152 0.105689935 1.500591594 0.035913212 0.014042025 1.24E-08 7.906999644 -0.276773561 SGS(ph)AAQAEGLCK ddPTM_A459_MK2206_30min_R2 2 SGSAAQAEGLCK 12 0 F8WF93;H7BZZ2;F8WE30;H7C0X4;Q92685 F8WF93 ALG3 "Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase" 1 S(0.041)GS(0.959)AAQAEGLCK;S(0.09)GS(0.91)AAQAEGLCK 130.61 0.0021426 26743000 109329 75344 100277 107563 88226 100983 208799 106204 119849 124474 TRUE FALSE 117699.3123 71602.52652 103620.1851 98774.75882 84761.80394 104825.9788 181383.4405 120085.2275 130273.2494 120412.4236 0.977468178 0.594644011 0.860543971 0.820303719 0.703929058 0.870557835 1.506351547 0.997282705 1.081892096 1 16.87762472 -7.0210923 24.78161011 1.152197982 0.786032243 0.519166164 0.162565455 523.6486619 615239.999 0.058899348 0.046140068 9.53E-08 7.0210923 -0.366165739 SGS(ph)DAGEARPPTPASPR ddPTM_A459_MK2206_30min_R1 1 SGSDAGEARPPTPASPR 17 1 Q96FS4;F6RY50;E9PIB3 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 S(0.166)GS(0.834)DAGEARPPTPASPR 152.94 0.00070426 6302400 1353.4 1861.4 1657.5 1271.1 1393.1 1313.2 1573.8 1564 1431.4 1314.8 TRUE FALSE 1238.286223 1740.222522 1544.993518 1369.000342 1337.609877 1387.552249 1468.814674 1550.326113 1580.199152 1477.68735 0.837989324 1.177666251 1.045548314 0.9264479 0.905204932 0.93900259 0.993995566 1.049157058 1.069373134 1 10.52912534 -10.46004746 6.254239183 1.000000001 0.9961817 0 0.092182272 1.04E-09 2.17E-10 0.091021245 0.02207589 3.47E-11 10.46004746 -0.0038183 SGS(ph)DAGEARPPTPASPR ddPTM_A459_MK2206_30min_R2 2 SGSDAGEARPPTPASPR 17 1 Q96FS4;F6RY50;E9PIB3 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 S(0.225)GS(0.774)DAGEARPPTPASPR;S(0.372)GS(0.623)DAGEARPPT(0.004)PAS(0.001)PR 122.16 0.0066442 19905300 27206.1 27243.9 24794.5 24529.1 24626.4 20849.9 24926.7 24561.2 24542.7 26270.1 TRUE FALSE 29289.01993 25891.00754 25621.13625 22524.99407 23659.4438 21643.35755 21653.79435 27771.43317 26677.37968 25412.90879 1.152525285 1.018813224 1.008193768 0.886360324 0.931001012 0.851667856 0.852078545 1.092808124 1.049757031 1 14.6332739 -1.994660831 13.32007872 0.976959118 1.182163628 0 0.097167693 0 0 0.023988038 0 0.010123698 1.994660831 0.205204511 SGS(ph)ESEEAELSLSLAR ddPTM_A459_MK2206_30min_R1 1 SGSESEEAELSLSLAR 16 0 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 S(0.3)GS(0.7)ESEEAELSLSLAR 201.4 5.98E-07 5391200 913.43 807.53 1006.8 662.07 837.86 732.03 876.77 772.88 872.19 893.18 TRUE FALSE 835.7379819 754.9596502 938.4612211 713.0627461 804.486262 773.476906 818.2822731 766.1227916 962.8572717 1003.833882 0.832546099 0.752076279 0.934877013 0.710339389 0.801413737 0.770522813 0.815157057 0.763196786 0.95917989 1 9.971304831 -8.353531183 4.570623413 0.995163704 0.797590579 0.622501116 0.056933924 0.136489538 4.621632911 0.051245668 0.013512912 4.43E-09 8.353531183 -0.197573125 SGS(ph)FDSR ddPTM_A459_MK2206_30min_R2 2 SGSFDSR 7 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.003)GS(0.997)FDSR;S(0.014)GS(0.986)FDSR 98.582 0.021764 38638500 177674 153091 162740 177904 199163 141908 218199 274186 217842 236718 TRUE FALSE 191276.858 145488.7236 168165.6704 163368.6741 191342.8599 147308.4084 189549.2092 310023.0516 236789.5034 228993.911 0.835292332 0.63533883 0.734367432 0.713419293 0.835580558 0.643285263 0.827747814 1.35384845 1.034042793 1 17.80494971 -7.606279792 6.485091352 1.142423174 0.732537285 0.730224547 0.107794382 0.096288852 6.064514174 0.047650635 0.027217547 2.48E-08 7.606279792 -0.409885889 SGS(ph)GGGSAKEPQEER ddPTM_A459_MK2206_30min_R1 4 SGSGGGSAKEPQEER 15 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 S(0.034)GS(0.951)GGGS(0.015)AKEPQEER;S(0.006)GS(0.994)GGGS(0.001)AKEPQEER;S(0.215)GS(0.785)GGGS(0.001)AKEPQEER;S(0.006)GS(0.994)GGGSAKEPQEER 209.23 6.86E-06 47567500 6059.68 6337.67 6361.61 6243.01 6323.75 4287.64 4999.26 6851.13 2850.6 3144.06 TRUE FALSE 5544.272395 5925.086531 5929.801638 6723.847712 6071.861647 4530.402471 4665.768487 6791.231293 3146.930071 3533.569889 1.569028651 1.676799021 1.678133396 1.902848372 1.718336367 1.282103542 1.320412114 1.92191792 0.890580962 1 11.78691073 -6.755845613 24.66397515 1.342960837 1.716289978 0.376511807 0.268548445 140.789172 620765.3995 0.087348918 0.084991926 1.75E-07 6.755845613 0.373329142 SGS(ph)GNFGGGR ddPTM_A459_MK2206_30min_R2 1 SGSGNFGGGR 10 0 F8W6I7;P09651-2;P09651;F8VZ49;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 S(0.003)GS(0.997)GNFGGGR 94.538 0.023727 13492000 78828 117050 94814 111480 91441 107570 124220 93663 112700 117180 TRUE FALSE 84863.13229 111237.4672 97975.05144 102371.7274 87850.56689 111663.6517 107909.7648 105905.0757 122502.4423 113356.4262 0.7486398 0.981307112 0.864309636 0.903095932 0.774994148 0.985066797 0.951951013 0.934266184 1.080683702 1 16.79050665 -7.420003183 1.032661009 1.021803485 0.867512079 0.431798117 0.073530418 0.550087461 1.10415103 0.055245614 0.027711629 3.80E-08 7.420003183 -0.154291406 SGS(ph)GSESEPSSR ddPTM_A459_MK2206_30min_R2 2 SGSGSESEPSSR 12 0 I3L0Z8;I3L2N2;O14641 I3L0Z8 DVL2 Segment polarity protein dishevelled homolog DVL-2 1 S(0.04)GS(0.957)GS(0.003)ESEPSSR;S(0.04)GS(0.935)GS(0.025)ESEPSSR 147.96 0.00061561 11059000 15562 11501.1 13756.8 12174.4 14451.8 11112.2 13291.9 18758.8 14707.7 18306.1 TRUE FALSE 16753.43869 10929.9721 14215.44485 11179.71258 13884.34972 11535.08256 11546.65756 21210.63957 15986.94916 17708.77346 0.946053024 0.617206614 0.802734581 0.631309255 0.784037909 0.651376708 0.652030339 1.197747524 0.902769986 1 14.11217667 -7.751140152 24.99999997 1.037694083 0.720804219 0.594379085 0.116181992 122.4557778 297246.8041 0.051288773 0.029190314 1.77E-08 7.751140152 -0.316889864 SGS(ph)GSESTGAEER ddPTM_A459_MK2206_30min_R1 1 SGSGSESTGAEER 13 0 Q14669;Q14669-2;Q14669-3;G5E9G6;H7C1L9 Q14669;H7C1L9 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.021)GS(0.943)GS(0.008)ES(0.001)T(0.027)GAEER 80.746 0.03645 363650 57.479 152.05 125.65 115.01 185.53 109.28 212.14 201.91 0 0 TRUE FALSE 52.59010922 142.1515174 117.1212281 123.8680901 178.1399472 115.4673392 197.9885277 200.1447222 0 0 0 SGS(ph)GSESTGAEER ddPTM_A459_MK2206_30min_R2 1 SGSGSESTGAEER 13 0 Q14669;Q14669-2;Q14669-3;G5E9G6;H7C1L9 Q14669;H7C1L9 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.048)GS(0.952)GSESTGAEER 177.93 0.00010533 2674200 4304.7 6259.7 3404 4544.2 4123.3 3669.4 7694.5 3963.3 4071.8 5945 TRUE FALSE 4634.271142 5948.8524 3517.487661 4172.924324 3961.398524 3809.041588 6684.202907 4481.316918 4425.957804 5751.015137 0.805817935 1.034400407 0.611629004 0.725597868 0.688817266 0.662325085 1.162264878 0.779221896 0.769595923 1 12.48960092 SGS(ph)IVELIAGGGSSCS(ph)PVLSR ddPTM_A459_MK2206_30min_R1 2 SGSIVELIAGGGSSCSPVLSR 21 0 P42858 P42858 HTT Huntingtin 2 S(0.1)GS(0.9)IVELIAGGGS(0.248)S(0.207)CS(0.544)PVLS(0.001)R;S(0.33)GS(0.665)IVELIAGGGS(0.01)S(0.034)CS(0.942)PVLS(0.018)R 117.43 0.0013809 2362100 627.76 456.11 478.15 519.89 637.07 726.04 753.22 762.55 806.7 868.31 TRUE FALSE 574.3657155 426.4171561 445.6945102 559.9320179 611.6941529 767.1477574 702.9740681 755.8831057 890.5593518 975.8827982 0.588560139 0.436955295 0.456709055 0.573769738 0.626811082 0.786106445 0.720346818 0.774563408 0.912567937 1 9.930564083 -7.217001441 0.437927739 0.997148473 0.441775907 0.884423986 0.059773662 0.362324132 0.157166969 0.064841852 0.070555661 6.07E-08 7.217001441 -0.555372565 SGS(ph)LGQPSPSAQR ddPTM_A459_MK2206_30min_R2 1 SGSLGQPSPSAQR 13 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 S(0.064)GS(0.936)LGQPSPSAQR 87.824 0.034771 0 6006.2 8396.5 6924.7 8847.4 10031 8115.7 6180.7 6201.6 8139 7416.6 TRUE FALSE 6466.03929 7979.54202 7155.566042 8124.539119 9637.132538 8424.54865 5369.166666 7012.170413 8846.915508 7174.596949 0.901240772 1.112193769 0.99734746 1.132403559 1.343229816 1.174219083 0.74835795 0.977360884 1.233088851 1 12.80868207 SGS(ph)MDPSGAHPSVR ddPTM_A459_MK2206_30min_R1 7 SGSMDPSGAHPSVR 14 0 Q07666-3;Q07666-2;Q07666 Q07666-3 KHDRBS1 "KH domain-containing, RNA-binding, signal transduction-associated protein 1" 1 S(0.45)GS(0.55)MDPSGAHPSVR;SGS(0.996)MDPS(0.003)GAHPSVR;S(0.007)GS(0.992)MDPSGAHPSVR;S(0.016)GS(0.983)MDPS(0.001)GAHPSVR;S(0.417)GS(0.583)MDPSGAHPSVR;S(0.005)GS(0.995)MDPSGAHPSVR;S(0.005)GS(0.984)MDPS(0.007)GAHPS(0.004)VR 225.72 4.42E-10 101352400 16981.1 12644.42 14171.85 11737.2 22431.1 20638.7 21137.9 17166.4 13566.7 11878.33 TRUE FALSE 15536.76827 11821.26596 13209.90431 12641.20118 21537.62179 21807.24536 19727.82926 17016.31597 14977.00701 13349.9072 1.163810957 0.885494242 0.989512819 0.946913038 1.613316218 1.63351288 1.477750292 1.274639271 1.121880983 1 13.70454209 -6.244002486 24.93255836 1.387460071 0.988014266 0.429949744 0.199047189 727.7642454 1040610.803 0.06103047 0.078600308 5.70E-07 6.244002486 -0.399445805 SGS(ph)MDPSGAHPSVR ddPTM_A459_MK2206_30min_R2 9 SGSMDPSGAHPSVR 14 0 Q07666-3;Q07666-2;Q07666 Q07666-3 KHDRBS1 "KH domain-containing, RNA-binding, signal transduction-associated protein 1" 1 S(0.011)GS(0.989)MDPSGAHPSVR;S(0.193)GS(0.805)MDPS(0.002)GAHPSVR;S(0.261)GS(0.739)MDPSGAHPSVR;S(0.346)GS(0.654)MDPSGAHPSVR;S(0.121)GS(0.875)MDPS(0.004)GAHPSVR;SGS(1)MDPSGAHPSVR;S(0.086)GS(0.914)MDPSGAHPSVR;S(0.001)GS(0.998)MDPSGAHPS(0.001)VR;S(0.004)GS(0.996)MDPSGAHPSVR 192.39 9.06E-05 151514400 103507.12 360524.4 235890 603845.7 587614.9 730274 641412 363898 500693.7 256552.5 TRUE FALSE 111431.7047 342621.2825 243754.4549 554509.5747 564542.1865 758065.0888 557193.8339 411460.718 544243.133 248181.2129 0.448993312 1.380528681 0.982163202 2.234293112 2.274717654 3.054482166 2.245108835 1.657904372 2.192926397 1 17.92103438 -5.759701315 24.90947724 2.175438028 0.981558114 0.488964222 0.5369821 35.49336169 508662.2548 0.147396645 0.239255101 1.74E-06 5.759701315 -1.193879914 SGS(ph)NGGGQAPGASPSVSLPASLGR ddPTM_A459_MK2206_30min_R1 1 SGSNGGGQAPGASPSVSLPASLGR 24 0 P38432 P38432 COIL Coilin 1 S(0.169)GS(0.831)NGGGQAPGASPSVSLPASLGR 203.29 4.43E-31 5287200 788.98 1207.1 1334.3 777.32 1071.1 831.11 1144.1 974.73 1057.8 888.17 TRUE FALSE 721.8731079 1128.517571 1243.731434 837.1893211 1028.435819 878.16673 1067.779177 966.2080384 1167.762095 998.2032049 0.723172501 1.130548935 1.245970187 0.838696286 1.030287034 0.879747456 1.06970121 0.967947241 1.169864101 1 9.963189726 -8.234425097 24.54442698 1.084932163 0.995105454 0.065380662 0.146616381 1647.69006 1497051.226 0.097416946 0.036797769 5.83E-09 8.234425097 -0.08982671 SGS(ph)NGGGQAPGASPSVSLPASLGR ddPTM_A459_MK2206_30min_R2 2 SGSNGGGQAPGASPSVSLPASLGR 24 0 P38432 P38432 COIL Coilin 1 S(0.228)GS(0.769)NGGGQAPGAS(0.002)PS(0.002)VSLPASLGR;S(0.169)GS(0.634)NGGGQAPGAS(0.171)PS(0.024)VS(0.002)LPASLGR 131.75 1.09E-07 13859800 23365.2 28422 23758.1 32596 22789.2 25608 34710 23904 18835.3 27669 TRUE FALSE 25154.05768 27010.60481 24550.1832 29932.80253 21894.3815 26582.53038 30152.53531 27028.33487 20473.56035 26766.1628 0.93977078 1.009132501 0.917209664 1.118307572 0.81798731 0.993139382 1.126516921 1.009794907 0.764904574 1 14.70812271 -8.208158106 24.99738826 0.882451123 0.992595713 0.158530708 0.100451238 494.7119443 232099.0263 0.065774251 0.02486028 6.19E-09 8.208158106 0.11014459 SGS(ph)PAPETTNESVPFAQHSSLDSR ddPTM_A459_MK2206_30min_R1 1 SGSPAPETTNESVPFAQHSSLDSR 24 0 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 S(0.18)GS(0.814)PAPET(0.005)T(0.001)NESVPFAQHSSLDSR 164.2 1.26E-13 19245000 3162.2 1799.6 1976.9 1531.1 4437.5 4625.3 3751.2 2713.7 1726.2 1545 TRUE FALSE 2893.238285 1682.445713 1842.713536 1649.025587 4260.744978 4887.180489 3500.964292 2689.974407 1905.644667 1736.406264 1.666221981 0.968924006 1.06122258 0.949677285 2.453771946 2.814537467 2.01621266 1.549161888 1.09746475 1 10.76188882 -6.244020615 24.87005774 1.908667932 1.140591686 0.244372994 0.555947982 1051.482727 1501279.191 0.175395456 0.225882159 5.70E-07 6.244020615 -0.768076246 SGS(ph)PAPETTNESVPFAQHSSLDSR ddPTM_A459_MK2206_30min_R2 2 SGSPAPETTNESVPFAQHSSLDSR 24 0 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 S(0.206)GS(0.791)PAPET(0.002)T(0.001)NESVPFAQHSSLDSR;S(0.046)GS(0.953)PAPETTNESVPFAQHSSLDSR 166.62 6.77E-16 31089000 51318 161499 86251 256640 231270 389130 239170 134103 254020 98769 TRUE FALSE 55246.94554 153479.1945 89126.56529 235671.691 222189.1778 403938.6148 207766.6917 151630.7225 276114.2004 95546.17562 0.578222469 1.606335298 0.932811436 2.466573775 2.325463854 4.227679572 2.174516043 1.586988925 2.889850888 1 16.54391051 -5.765753012 24.76931893 2.471994674 1.095844152 0.351065038 0.828983985 103.1621531 592373.2505 0.232393362 0.358839773 1.71E-06 5.765753012 -1.376150522 SGS(ph)PGSSSYEHYESR ddPTM_A459_MK2206_30min_R1 1 SGSPGSSSYEHYESR 15 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 S(0.014)GS(0.98)PGS(0.004)S(0.001)SYEHYESR 138.01 0.00050056 0 762.89 778.02 550.12 667.54 878.9 709.13 813.45 814.23 378.95 330.28 TRUE FALSE 698.0021994 727.3707566 512.7793871 718.9540465 843.8915519 749.2803278 759.1862347 807.111273 418.3432086 371.1975799 1.880406116 1.959524512 1.381418993 1.936850037 2.273429563 2.018548526 2.045234872 2.174344114 1.127009526 1 8.536043494 -8.305246348 7.354159907 1.050521707 1.953958111 0.71767623 0.224601611 0.166867159 23.64196937 0.228671494 0.060619512 4.95E-09 8.305246348 0.903436404 SGS(ph)PISSEER ddPTM_A459_MK2206_30min_R1 2 SGSPISSEER 10 0 H8Y6P7;P0CAP2-3;P0CAP2;P0CAP1-11;P0CAP2-2 H8Y6P7 GCOM1;POLR2M DNA-directed RNA polymerase II subunit GRINL1A 1 S(0.042)GS(0.955)PIS(0.002)SEER;S(0.003)GS(0.997)PISSEER 177.57 8.38E-05 66928000 5904.8 6174.8 6123.9 5615.9 5626.8 4960.8 6199.4 5607.6 4737.1 5419.2 TRUE FALSE 5402.565753 5772.819398 5708.22673 6048.437591 5402.672641 5241.676209 5785.849337 5558.573344 5229.538497 6090.571409 0.887037585 0.947828867 0.937223513 0.993082124 0.887055135 0.860621419 0.949968229 0.912652192 0.85862855 1 12.57236187 -4.734457427 23.64073315 0.924430705 0.88703721 0.060047472 0.046609277 4941.552127 4329175.346 0.011635807 0.88581823 1.84E-05 4.734457427 -0.037393495 SGS(ph)PISSEER ddPTM_A459_MK2206_30min_R2 1 SGSPISSEER 10 0 H8Y6P7;P0CAP2-3;P0CAP2;P0CAP1-11;P0CAP2-2 H8Y6P7 GCOM1;POLR2M DNA-directed RNA polymerase II subunit GRINL1A 1 S(0.017)GS(0.946)PIS(0.026)S(0.012)EER 98.182 0.019835 40515000 58258 61428 54416 66710 66894 53675 58029 56706 53603 59976 TRUE FALSE 62718.27727 58377.57484 56230.20228 61259.57961 64267.40544 55717.63974 50409.72259 64117.6689 58265.29205 58018.98803 1.080995712 1.006180508 0.96916896 1.055853983 1.107696077 0.960334567 0.868848705 1.105115258 1.004245231 1 15.82423751 -6.802756989 24.99999093 0.986849708 1.038383095 0.156368197 0.064685823 339.372387 205341.3166 0.024077848 0.021234905 1.57E-07 6.802756989 0.051533387 SGS(ph)PISSEERR ddPTM_A459_MK2206_30min_R1 2 SGSPISSEERR 11 1 H8Y6P7;P0CAP2-3;P0CAP2;P0CAP1-11;P0CAP2-2 H8Y6P7 GCOM1;POLR2M DNA-directed RNA polymerase II subunit GRINL1A 1 S(0.01)GS(0.571)PIS(0.25)S(0.168)EERR;S(0.149)GS(0.851)PISSEERR 92.943 0.027692 14271400 4592.7 4758.2 4785.3 4127.4 4379.6 3802.8 4673.9 4355.9 3769.1 2792.6 TRUE FALSE 4202.066748 4448.440315 4460.487169 4445.293063 4205.151258 4018.11125 4362.112659 4317.816826 4160.911433 3138.568371 1.338848243 1.417346952 1.42118528 1.416344186 1.339831019 1.280236966 1.389841528 1.375728139 1.325735476 1 11.61589092 -12.86001047 0.306738643 8.60E-09 1.390923598 0.879243304 0.041210488 31.20644962 0.731970346 19.93480358 0.043699088 1.38E-13 12.86001047 1.390923589 SGS(ph)PISSEERR ddPTM_A459_MK2206_30min_R2 2 SGSPISSEERR 11 1 H8Y6P7;P0CAP2-3;P0CAP2;P0CAP1-11;P0CAP2-2 H8Y6P7 GCOM1;POLR2M DNA-directed RNA polymerase II subunit GRINL1A 1 S(0.031)GS(0.968)PISSEERR;S(0.147)GS(0.853)PISSEERR 96.82 0.010192 25047700 41187 52995 48219 52137 57966 49428 55816 45963 52503 54714 TRUE FALSE 44340.30839 50363.34536 49826.59739 47877.24032 55689.96358 51309.01718 48487.29215 51970.52191 57069.61604 52928.68666 0.837736796 0.951532119 0.941391154 0.904561276 1.052169761 0.969399024 0.916087196 0.981897062 1.078236012 1 15.69176224 -2.327032875 0.368891227 1.002300559 2.57E-14 0.459321021 0.049272242 37.5310943 0.913421868 0.041056294 24.16667422 0.004709417 2.327032875 -1.002300559 SGS(ph)PKLDPSEVYLK ddPTM_A459_MK2206_30min_R2 1 SGSPKLDPSEVYLK 14 1 Q5TCQ9-3;Q5TCQ9-2;Q5TCQ9;Q5TCQ9-1 Q5TCQ9-3 MAGI3 "Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3" 1 S(0.093)GS(0.905)PKLDPS(0.002)EVYLK 88.427 0.01144 10778000 66290 135340 105250 98784 134510 77826 119800 89499 110960 91915 TRUE FALSE 71365.21337 128619.2124 108758.9825 90713.03121 129228.4615 80787.72297 104070.1161 101196.8266 120611.1002 88915.82108 0.802615468 1.44652786 1.223167949 1.02021249 1.453379837 0.908586593 1.17043418 1.138119464 1.356463887 1 16.44015252 SGS(ph)PMVPSYETSVSPQANR ddPTM_A459_MK2206_30min_R1 1 SGSPMVPSYETSVSPQANR 19 0 Q9Y2I7;E9PDH4;Q9Y2I7-2;Q9Y2I7-3;Q9Y2I7-4 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 S(0.286)GS(0.712)PMVPS(0.002)YETSVSPQANR 122.46 0.00042046 5613300 509.88 475.73 547.97 319.15 667.09 392.8 609.05 509.35 588.28 618.79 TRUE FALSE 466.5120285 444.7598905 510.7753231 343.7309883 640.5183927 415.0399965 568.4213858 504.8968067 649.4338112 695.4503768 0.670805631 0.639527859 0.734452579 0.494256671 0.92101236 0.596793115 0.81734284 0.72599976 0.933831993 1 9.441803766 -8.232396161 0.586227254 1.011483612 0.660025784 0.498303184 0.109301745 0.6326065 0.518444375 0.10364964 0.050257735 5.86E-09 8.232396161 -0.351457828 SGS(ph)PNLPHSVSSYK ddPTM_A459_MK2206_30min_R1 2 SGSPNLPHSVSSYK 14 0 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 S(0.315)GS(0.682)PNLPHS(0.003)VSSYK;S(0.311)GS(0.689)PNLPHSVSSYK 159.64 0.00029672 19645900 10323.7 7404.2 9173.6 7129.4 11269.4 10024.4 10364.6 9889.6 7660.2 6992.7 TRUE FALSE 9445.615103 6922.185234 8550.921591 7678.507623 10820.51593 10591.97287 9673.196445 9803.13627 8456.505202 7859.008468 1.201883818 0.880796256 1.088040766 0.977032619 1.376829657 1.347749262 1.23084184 1.24737571 1.076026987 1 12.94013159 -6.244638983 24.94663211 1.233121865 1.029435519 0.295929566 0.130781135 882.5161584 1310433.514 0.037670068 0.048499243 5.69E-07 6.244638983 -0.203686346 SGS(ph)PNLPHSVSSYK ddPTM_A459_MK2206_30min_R2 1 SGSPNLPHSVSSYK 14 0 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 S(0.099)GS(0.847)PNLPHS(0.02)VS(0.033)SYK 170.79 0.00015285 17165000 21384 38229 28420 36817 36067 38254 40435 27470 31498 30289 TRUE FALSE 23021.17548 36330.60345 29367.50862 33808.93333 34650.82836 39709.78278 35125.83593 31060.42332 34237.6391 29300.67241 0.785687617 1.239923881 1.002281047 1.153862029 1.182594989 1.355251587 1.198806479 1.06005838 1.16849329 1 14.83864615 -4.753594612 24.99954796 1.157395927 0.785686947 0.529075875 0.103320829 232.3825069 740492.3742 0.026174377 0.277281097 1.76E-05 4.753594612 -0.37170898 SGS(ph)PRPTEPTDFLMLFEGSPSGK ddPTM_A459_MK2206_30min_R1 3 SGSPRPTEPTDFLMLFEGSPSGK 23 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 S(0.062)GS(0.801)PRPT(0.054)EPT(0.083)DFLMLFEGSPSGK;S(0.124)GS(0.53)PRPT(0.16)EPT(0.186)DFLMLFEGSPSGK;S(0.042)GS(0.831)PRPT(0.117)EPT(0.01)DFLMLFEGSPSGK 107.15 3.63E-05 93336000 16817.8 19513.3 18838.8 16892.7 16120.5 14819.9 16717.6 16012.3 15272.3 13623.1 TRUE FALSE 15387.3578 18242.98062 17560.07474 18193.77868 15478.38635 15658.98993 15602.39941 15872.30615 16859.91024 15310.83248 1.004998116 1.191508081 1.146905289 1.188294543 1.010943485 1.02273929 1.019043179 1.036671662 1.10117528 1 13.90226511 -6.271109796 24.96653813 1.032508638 1.13810939 0.451562076 0.05449497 589.7419671 1522560.181 0.016551376 0.019007316 5.36E-07 6.271109796 0.105600753 SGS(ph)PSDNSGAEEMEVSLAKPK ddPTM_A459_MK2206_30min_R1 1 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 1 S(0.027)GS(0.946)PS(0.027)DNS(0.001)GAEEMEVSLAKPK 130.77 2.85E-05 5419900 2005.1 2344.6 2496.9 1949.9 2014.3 1664.6 1901.9 2210.8 2001.4 2422.7 TRUE FALSE 1834.555716 2191.966114 2327.417385 2100.081636 1934.066166 1758.848213 1775.027721 2191.471209 2209.452692 2722.842366 0.673764937 0.80502865 0.854774927 0.771282856 0.710311471 0.645960352 0.651902491 0.804846889 0.811450828 1 11.41089775 -8.686322095 1.593559122 0.998608027 0.737999146 0.592210101 0.065845038 0.503497622 2.531876987 0.070804863 0.020417526 2.06E-09 8.686322095 -0.260608882 SGS(ph)PSDNSGAEEMEVSLAKPK ddPTM_A459_MK2206_30min_R2 2 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 1 S(0.115)GS(0.422)PS(0.422)DNS(0.041)GAEEMEVSLAKPK;S(0.051)GS(0.316)PS(0.316)DNS(0.316)GAEEMEVSLAKPK 91.889 0.00034636 26430900 117269 126290 120790 124315 126434 93616 152267 111285 109327 144039 TRUE FALSE 126247.2048 120018.6222 124817.0783 114158.0668 121469.5659 97178.62248 132274.16 125830.3316 118836.0648 139339.0192 0.906043444 0.861342522 0.895779797 0.819282836 0.871755568 0.697425768 0.949297338 0.903051653 0.852855614 1 17.08823979 -9.35844278 0.679962834 1.004126401 0.854612562 0.293248541 0.064380921 4.385710794 2.560895128 0.11698794 0.024371701 4.38E-10 9.35844278 -0.149513839 SGS(ph)SASESYAGSEK ddPTM_A459_MK2206_30min_R1 1 SGSSASESYAGSEK 14 0 J3QR07;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 S(0.38)GS(0.602)S(0.018)ASESYAGSEK 110.35 0.0042787 3049800 982.29 1095 1222.1 884.93 1216.1 1049.6 1138.1 922.99 843.89 833.64 TRUE FALSE 898.7410773 1023.715301 1139.147257 953.0874619 1167.660162 1109.027445 1062.179426 914.9203957 931.6153854 936.9176169 0.959253045 1.092641746 1.215845701 1.017258556 1.246278372 1.183697931 1.133695649 0.976521713 0.994340771 1 9.871778387 -7.759964287 24.97318917 0.989073405 1.126989831 0.347933492 0.081882207 42.4585841 718865.7035 0.041739114 0.022418075 1.74E-08 7.759964287 0.137916426 SGS(ph)SPGLR ddPTM_A459_MK2206_30min_R1 1 SGSSPGLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.006)GS(0.497)S(0.497)PGLR 126.24 0.0048856 12420000 3911.9 4231.1 3700.7 3397.7 2846.7 2659.6 4355.2 4521 753.2 2430.2 TRUE FALSE 3579.172363 3955.654621 3449.506795 3659.391443 2733.309911 2810.184254 4064.672555 4481.473374 831.4978354 2731.271523 1.310441797 1.448283185 1.262967364 1.339812396 1.000746315 1.028892305 1.488197903 1.64080112 0.304436168 1 11.41535703 -8.260837688 24.99983158 0.652218092 1.304310887 0.547277391 0.240974479 40.57252003 1685954.162 0.189109412 0.061630446 5.48E-09 8.260837688 0.652092795 SGS(ph)SPGLR ddPTM_A459_MK2206_30min_R2 4 SGSSPGLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.127)GS(0.437)S(0.437)PGLR;S(0.276)GS(0.629)S(0.095)PGLR;S(0.01)GS(0.862)S(0.127)PGLR;S(0.198)GS(0.694)S(0.107)PGLR 126.24 0.0048856 452949000 535189 539308 451412 602378 533157 490674 556880 561270 536410 491942 TRUE FALSE 576163.4813 512526.7489 466461.8508 553161.7905 512222.5773 509346.9429 483760.9871 634629.9161 583065.9722 475889.9728 1.210707336 1.076985812 0.980188441 1.162373284 1.076346648 1.070304003 1.016539567 1.333564379 1.22521172 1 18.86026853 -7.744302301 24.99922647 1.209541121 1.082558985 0.170137361 0.098684006 312.0069718 455150.9263 0.044844027 0.025808 1.80E-08 7.744302301 -0.126982136 SGS(ph)SQELDVKPSAS(ph)PQER ddPTM_A459_MK2206_30min_R2 1 SGSSQELDVKPSASPQER 18 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.109)GS(0.814)S(0.077)QELDVKPS(0.015)AS(0.985)PQER 134.09 0.004361 0 25178 20724 24188 19817 15717 11575 22078 16546 13519 21837 TRUE FALSE 27105.64704 19694.8763 24994.41585 18197.88771 15099.87161 12015.49474 19179.13208 18708.61901 14694.85818 21124.46048 1.283140323 0.932325648 1.183197832 0.861460473 0.714805077 0.568795343 0.907911097 0.88563772 0.695632355 1 14.36662687 -5.8768156 4.778438885 0.784466894 1.111578544 0.532286039 0.141063122 0.16569753 6.197229794 0.039826011 0.060680407 1.33E-06 5.8768156 0.327111649 SGS(ph)SQELDVKPSASPQER ddPTM_A459_MK2206_30min_R1 1 SGSSQELDVKPSASPQER 18 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.049)GS(0.475)S(0.475)QELDVKPSASPQER 57.188 0.033622 38940000 694.65 870.88 779.9 848.87 666.02 660.36 711.54 749.13 731.76 793.61 TRUE FALSE 635.5663697 814.1855537 726.9625609 914.2501145 639.4910131 697.7490125 664.0744649 742.5804354 807.8290706 891.9283982 0.712575551 0.912837348 0.815045874 1.025026354 0.716975728 0.78229263 0.744537864 0.832556107 0.905710674 1 9.800784089 -8.512639174 2.498279012 0.998786483 0.820556869 0.295366655 0.08951783 0.364544656 5.328959295 0.086246588 0.023450251 3.07E-09 8.512639174 -0.178229614 SGS(ph)SQELDVKPSASPQER ddPTM_A459_MK2206_30min_R2 2 SGSSQELDVKPSASPQER 18 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.476)GS(0.505)S(0.019)QELDVKPSASPQER;S(0.074)GS(0.463)S(0.463)QELDVKPSASPQER 53.342 0.042039 68277000 60703 87348 80501 75045 87522 56913 78232 58115 55499 81204 TRUE FALSE 65350.46835 83010.42534 83184.86316 68913.58344 84085.44652 59078.8641 67960.04443 65710.83004 60326.2027 78554.32013 0.831914378 1.056726418 1.058947019 0.877272992 1.070411486 0.752076576 0.865134398 0.836501798 0.767955252 1 16.261403 -6.762604602 25 0.83541502 0.982153515 0.327426912 0.096066832 34.08224518 731226.3177 0.03133078 0.029187973 1.73E-07 6.762604602 0.146738494 SGS(ph)TESLNPR ddPTM_A459_MK2206_30min_R2 1 SGSTESLNPR 10 0 Q96JB2 Q96JB2 COG3 Conserved oligomeric Golgi complex subunit 3 1 S(0.001)GS(0.957)T(0.042)ESLNPR 112.94 0.0079334 3850200 9964.1 9123.2 8950.2 11507 10040 9513.4 8668.3 8883.9 8203.7 9943 TRUE FALSE 10726.95916 8670.155154 9248.595201 10566.84129 9645.779153 9875.439103 7530.141798 10045.05623 8917.242997 9618.560724 1.115235373 0.90139839 0.961536291 1.098588614 1.002829782 1.02670653 0.782876151 1.044340886 0.927087041 1 13.23160532 SGS(ph)VSNYR ddPTM_A459_MK2206_30min_R1 1 SGSVSNYR 8 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 S(0.145)GS(0.852)VS(0.002)NYR 112.85 0.010999 33900000 10297 9774.6 9587.5 7583.9 8084.9 7564.3 10599 12316 7154.6 10581 TRUE FALSE 9421.186078 9138.271763 8936.727212 8168.013292 7762.861313 7992.584129 9891.960049 12208.32251 7898.346273 11891.85416 0.792238616 0.768448018 0.7514999 0.686857842 0.652788136 0.672105798 0.831826552 1.026612196 0.664181226 1 13.53768606 -7.455062808 5.522967011 0.892491882 0.720871576 0.395630675 0.099160639 0.220385113 12.83584065 0.041705515 0.02731746 3.51E-08 7.455062808 -0.171620306 SGS(ph)VYEPLK ddPTM_A459_MK2206_30min_R2 2 SGSVYEPLK 9 0 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L3F2;H3BV13;H3BQ89 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 S(0.034)GS(0.966)VYEPLK;SGS(1)VYEPLK 115 0.0083044 9187300 61896 78869 67982 79760 68544 60489 75421 51638 69563 81105 TRUE FALSE 66634.80535 74952.48015 70248.48595 73243.35286 65852.61815 62790.95128 65518.1321 58387.2639 75613.464 78458.55049 0.84929947 0.955313088 0.895357938 0.933529264 0.839330038 0.800307307 0.835066818 0.744179742 0.963737713 1 16.25964306 -6.270374171 24.14956663 0.846370933 0.910797878 0.049268638 0.075258138 784.773058 2121135.524 0.022004454 0.025346496 5.37E-07 6.270374171 0.064426946 SGS(ph)YSYLEER ddPTM_A459_MK2206_30min_R1 2 SGSYSYLEER 10 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;H0YIM2;H0YIS3;A0A0U1RQZ1 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.097)GS(0.891)YS(0.012)YLEER;S(0.036)GS(0.963)YS(0.001)YLEER 156.01 0.00051582 37032000 4389.2 4823.8 4455 3980.1 4272.1 3339.2 4073.8 4643.3 4037.6 4034.7 TRUE FALSE 4015.875491 4509.769743 4152.607012 4286.647992 4101.933211 3528.262618 3802.044235 4602.704118 4457.322969 4534.549096 0.88561738 0.994535432 0.915770659 0.945330594 0.904595611 0.778084556 0.838461367 1.015030165 0.982969392 1 12.14674338 -7.777003749 24.98703175 0.999249879 0.897134753 0.429876056 0.055204625 277.2609131 445108.1122 0.03386939 0.01636159 1.67E-08 7.777003749 -0.102115126 SGS(ph)YSYLEER ddPTM_A459_MK2206_30min_R2 1 SGSYSYLEER 10 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;H0YIM2;H0YIS3;A0A0U1RQZ1 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.01)GS(0.976)YS(0.014)YLEER 145.23 0.00090917 25042000 23102 24578 26310 29275 24319 38925 33145 21116 25087 30992 TRUE FALSE 24870.70688 23357.49226 27187.16227 26883.13885 23364.11387 40406.31815 28793.02169 23875.9337 27269.02191 29980.73358 0.829556315 0.779083414 0.906821116 0.896680489 0.779304276 1.347742811 0.960384162 0.796375901 0.909551524 1 14.87174806 SGSDAGEARPPT(ph)PASPR ddPTM_A459_MK2206_30min_R1 1 SGSDAGEARPPTPASPR 17 1 Q96FS4;F6RY50;E9PIB3 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 SGSDAGEARPPT(0.991)PAS(0.009)PR 105 0.027988 3964100 1842.5 1407.3 1344.5 1081.8 1547.4 1342.1 1813.6 1393.5 1110.1 1398 TRUE FALSE 1685.7857 1315.684514 1253.239086 1165.120423 1485.763781 1418.088542 1692.618053 1381.316776 1225.498868 1571.194794 1.072932335 0.837378356 0.797634444 0.741550588 0.945626721 0.902554252 1.077280843 0.879150556 0.779978951 1 10.61764634 SGSDAGEARPPTPAS(ph)PR ddPTM_A459_MK2206_30min_R1 1 SGSDAGEARPPTPASPR 17 1 Q96FS4;F6RY50;E9PIB3 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 SGSDAGEARPPT(0.001)PAS(0.999)PR 194.05 4.20E-07 5504800 1804 1713.5 1601.3 1324.9 1533.8 1389.8 1790.1 1399.5 884.9 1049.7 TRUE FALSE 1650.560327 1601.950839 1492.608217 1426.944028 1472.705498 1468.489275 1670.685695 1387.264319 976.8885216 1179.744761 1.399082566 1.357879172 1.265195886 1.209536228 1.248325525 1.244751682 1.416141653 1.175902081 0.82805074 1 10.20425905 -8.087681951 4.457023863 0.92192118 1.298318262 0.804185348 0.07623307 0.097573874 3.328592485 0.056672854 0.020340201 8.17E-09 8.087681951 0.376397082 SGSGEDESS(ph)EDEAR ddPTM_A459_MK2206_30min_R2 1 SGSGEDESSEDEAR 14 0 Q8N7H5 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog 1 SGS(0.002)GEDES(0.122)S(0.876)EDEAR 123.68 0.0019417 0 2255.7 1847.3 979.68 2797.3 2827.3 1980.8 784.7 891.67 490.51 2602.6 TRUE FALSE 2428.398126 1755.565768 1012.342042 2568.751642 2716.285996 2056.180732 681.6679474 1008.214331 533.1736732 2517.677375 0.964539043 0.697295764 0.402093633 1.020286264 1.078885652 0.816697466 0.2707527 0.400454141 0.21177204 1 11.29787771 -7.246106522 23.38576635 0.420782588 0.824452559 0.293956568 0.268221509 400.4919811 610833.2913 0.103506896 0.079801518 5.67E-08 7.246106522 0.403669971 SGSGSVGNGSSRYS(ph)PSQNS(ph)PIHHIPSR ddPTM_A459_MK2206_30min_R2 1 SGSGSVGNGSSRYSPSQNSPIHHIPSR 27 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 2 S(0.004)GS(0.011)GS(0.028)VGNGS(0.181)S(0.067)RY(0.146)S(0.588)PS(0.086)QNS(0.888)PIHHIPSR 59.005 0.028522 0 2613.2 9459.3 9118.3 11126 11137 10655 9537.7 7039 12784 8325.9 TRUE FALSE 2813.268601 8989.564917 9422.299571 10216.97021 10699.70542 11060.48349 8285.388533 7959.021469 13895.92921 8054.226565 0.349290969 1.116130127 1.169857775 1.268522822 1.32845846 1.373252093 1.028700703 0.988179486 1.725296538 1 12.97553034 -4.701631152 2.655588202 1.235990801 0.047428393 0.616585383 0.208190869 0.437459282 3.308342206 0.052221508 1.271843799 1.99E-05 4.701631152 -1.188562407 SGSIGAADS(ph)PENWEK ddPTM_A459_MK2206_30min_R1 1 SGSIGAADSPENWEK 15 0 D6RAI0;D6RGK7;D6RAZ3;D6R9T3;E7EMP6;Q96FZ2 D6RAI0 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 1 SGSIGAADS(1)PENWEK 114.63 0.0031699 0 1168 980.47 1116.3 807.02 1018.7 1029.7 1199.8 920 816.37 728.65 TRUE FALSE 1068.655467 916.6412248 1040.528666 869.1768202 978.1230219 1088.000724 1119.763531 911.956537 901.2345829 818.920663 1.304956041 1.119328485 1.270609857 1.061368774 1.194405107 1.328578913 1.367365096 1.113607921 1.100515134 1 9.67757988 -7.983328003 24.73337813 1.06919217 1.228396493 0.409344036 0.091493339 223.8343563 332064.2117 0.052586071 0.025251615 1.04E-08 7.983328003 0.159204323 SGSIVELIAGGGSSCS(ph)PVLSR ddPTM_A459_MK2206_30min_R1 2 SGSIVELIAGGGSSCSPVLSR 21 0 P42858 P42858 HTT Huntingtin 1 SGSIVELIAGGGSS(0.001)CS(0.999)PVLSR;SGSIVELIAGGGSS(0.006)CS(0.993)PVLSR 254.54 1.80E-39 125806000 9535.8 8121.5 8101.8 7150.8 7454.9 5673.3 5892.6 5444.3 4772.8 5191.8 TRUE FALSE 8724.730136 7592.788874 7551.872389 7701.555855 7157.955547 5994.517343 5499.515406 5396.701059 5268.94964 5834.99938 1.49524097 1.301249303 1.294237051 1.319889747 1.22672773 1.027338129 0.942504883 0.924884599 0.902990608 1 12.51051679 -6.695450342 1.417851837 0.927747487 1.35784779 0.917908346 0.056545503 0.106216289 0.445530439 0.025343634 0.02426811 2.02E-07 6.695450342 0.430100303 SGSIVELIAGGGSSCS(ph)PVLSR ddPTM_A459_MK2206_30min_R2 2 SGSIVELIAGGGSSCSPVLSR 21 0 P42858 P42858 HTT Huntingtin 1 SGSIVELIAGGGS(0.003)S(0.002)CS(0.995)PVLSR;SGSIVELIAGGGSS(0.001)CS(0.999)PVLSR 164.74 1.15E-08 82196000 268070 307410 252430 300580 253600 256700 278040 171471 226410 225270 TRUE FALSE 288593.6453 292144.4664 260845.8902 276021.6525 243642.3898 266468.8984 241533.014 193882.8484 246102.7325 217919.4583 1.324313338 1.340607528 1.196983015 1.266622332 1.118038708 1.222786163 1.108359097 0.88969957 1.129328856 1 17.7334355 -6.569295251 0.490155073 0.986926514 1.35514753 0.679427172 0.076031242 0.665278791 0.331833003 0.067254491 0.109781405 2.70E-07 6.569295251 0.368221015 SGSLDDS(ph)FSDFQELPASSK ddPTM_A459_MK2206_30min_R1 2 SGSLDDSFSDFQELPASSK 19 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 SGSLDDS(0.875)FS(0.125)DFQELPASSK;SGSLDDS(0.899)FS(0.101)DFQELPASSK 243.61 3.66E-30 9070400 9986.6 9243.7 9296.9 8286.7 9265.6 7546.3 8727.6 9124.4 7370.1 7029.8 TRUE FALSE 9137.187228 8641.93345 8665.852331 8924.94307 8896.531532 7973.564985 8145.397728 9044.626333 8136.248269 7900.704696 1.156502816 1.093818056 1.096845492 1.129638863 1.126042787 1.009221999 1.030971039 1.144787292 1.029812983 1 12.94776562 -6.741773965 24.93287592 1.051258638 1.118269267 0.467617499 0.040892523 251.3361464 318656.6654 0.013710908 0.013692869 1.81E-07 6.741773965 0.067010629 SGSLDDS(ph)FSDFQELPASSK ddPTM_A459_MK2206_30min_R2 3 SGSLDDSFSDFQELPASSK 19 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.027)GS(0.027)LDDS(0.899)FS(0.047)DFQELPASSK;S(0.029)GS(0.109)LDDS(0.805)FS(0.056)DFQELPASSK;S(0.008)GS(0.001)LDDS(0.989)FS(0.001)DFQELPASSK 156.13 2.79E-05 0 20183.8 24002.4 21165.9 23662.8 25284.1 27872.1 26588.6 17520.1 20240.1 24828.2 TRUE FALSE 21729.08725 22810.47572 21871.56054 21729.47355 24291.31919 28932.7923 23097.48488 19810.03723 22000.54731 24018.05787 0.90469793 0.949721907 0.910629855 0.904714014 1.011377328 1.204626638 0.961671631 0.824797631 0.916000263 1 14.55183188 -1.560632215 19.85645396 0.959229183 0.004791894 0 0.096408501 0 0 0.024169578 0 0.027502222 1.560632215 -0.954437289 SGSLDSELSVS(ph)PK ddPTM_A459_MK2206_30min_R1 4 SGSLDSELSVSPK 13 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 SGSLDSELS(0.038)VS(0.962)PK;SGSLDSELS(0.063)VS(0.937)PK;SGSLDSELS(0.001)VS(0.999)PK;SGSLDSELSVS(1)PK 211.83 5.32E-06 213422000 14741 19464.2 17006.9 14527.4 9404.9 8994.2 12680.2 12274.5 18567.5 17947.8 TRUE FALSE 13487.20054 18197.07704 15852.51901 15646.30287 9030.282918 9503.443831 11834.32699 12167.18534 20497.65807 20171.30896 0.668632887 0.902126732 0.785894413 0.775671172 0.44767957 0.471136695 0.586691078 0.603192652 1.016178876 1 14.30001709 -8.265987293 24.64112778 1.00808952 0.656409172 0.529323625 0.133129197 302.6254714 1639622.702 0.132000688 0.038677587 5.42E-09 8.265987293 -0.351680348 SGSLDSELSVS(ph)PK ddPTM_A459_MK2206_30min_R2 4 SGSLDSELSVSPK 13 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 SGSLDSELS(0.015)VS(0.985)PK;SGSLDSELS(0.23)VS(0.77)PK;SGSLDSELS(0.001)VS(0.999)PK;SGSLDSELSVS(1)PK 193.06 0.00018381 179651000 260338 207196 233226 178038 176488 124326 257464 181055 145044 254745 TRUE FALSE 280269.6774 196906.9479 241001.6384 163491.7259 169558.1943 129057.313 223658.6675 204719.5102 157659.6649 246432.6915 1.137307212 0.799029328 0.977961313 0.663433593 0.688050734 0.52370208 0.907585216 0.830731949 0.639767654 1 17.91083413 SGSLDSELSVS(ph)PKR ddPTM_A459_MK2206_30min_R1 2 SGSLDSELSVSPKR 14 1 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 SGSLDS(0.048)ELS(0.007)VS(0.945)PKR;SGS(0.001)LDS(0.106)ELS(0.003)VS(0.89)PKR 128.73 0.0019946 23535000 5021.1 4373.1 4964.4 5072 4619.1 3990.8 4386.2 4708.7 3823 3059.4 TRUE FALSE 4594.029078 4088.410395 4627.43036 5462.646319 4435.111466 4216.755647 4093.604601 4667.532332 4220.414531 3438.421569 1.336086627 1.189036979 1.34580076 1.588707553 1.28986844 1.226363773 1.190547616 1.357463661 1.22742789 1 11.74753072 -6.52050412 22.55518169 1.226091676 1.362019305 0.27310435 0.123242556 44.25584201 420381.5638 0.041457432 0.042264768 3.02E-07 6.52050412 0.135927629 SGSLGQPSPS(ph)AQR ddPTM_A459_MK2206_30min_R2 1 SGSLGQPSPSAQR 13 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 S(0.173)GS(0.07)LGQPS(0.185)PS(0.573)AQR 114.27 0.0042829 10225000 15626 20052 16962 18363 18185 18455 16631 16747 16104 12482 TRUE FALSE 16822.33857 19056.24684 17527.50461 16862.68416 17470.96553 19157.31796 14447.32972 18935.8904 17504.69681 12074.71336 1.393187405 1.578194551 1.451587635 1.396528734 1.446905198 1.586565029 1.196494632 1.568226908 1.449698745 1 13.55970132 -11.27361367 2.319701189 0.880172542 1.453725583 0.606145155 0.10927983 3901957.595 2546109.373 2672526.026 0.027470358 5.33E-12 11.27361367 0.573553041 SGSMEEDVDTSPGGDYYTSPS(ph)SPTSSSR ddPTM_A459_MK2206_30min_R1 1 SGSMEEDVDTSPGGDYYTSPSSPTSSSR 28 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 SGSMEEDVDTSPGGDYYTSPS(0.874)S(0.085)PT(0.029)S(0.01)S(0.003)SR 221.37 3.66E-45 12850000 3945.9 3601.1 3858.4 3429.8 4393.6 3865.3 4582.4 3946 3240.1 3439.1 TRUE FALSE 3610.280484 3366.667735 3596.502558 3693.96379 4218.593608 4084.149946 4276.716457 3911.500538 3576.91999 3865.161672 0.934056785 0.871028956 0.930492141 0.955707446 1.091440402 1.056656951 1.106478026 1.011988856 0.925425711 1 11.91631305 -6.015131551 3.497228824 1.037446424 0.909325899 0.536467735 0.050504123 0.183191088 4.746746625 0.016004852 0.02301693 9.66E-07 6.015131551 -0.128120525 SGSMEEDVDTSPGGDYYTSPS(ph)SPTSSSR ddPTM_A459_MK2206_30min_R2 2 SGSMEEDVDTSPGGDYYTSPSSPTSSSR 28 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 SGSMEEDVDTSPGGDYYTSPS(0.404)S(0.239)PT(0.239)S(0.085)S(0.03)S(0.001)R;SGSMEEDVDTSPGGDYYTSPS(0.535)S(0.306)PT(0.106)S(0.037)S(0.013)S(0.003)R 187.41 1.42E-32 9735800 89004 103859 102322 133398 113583 111970 115571 90178 107045 112006 TRUE FALSE 95818.21467 98701.51309 105733.3644 122498.9567 109123.1607 116231.0968 100396.3889 101964.5742 116355.5806 108351.2534 0.884329546 0.910940206 0.975838868 1.130572585 1.00712412 1.072724986 0.926582626 0.941055789 1.073873877 1 16.72535632 -5.331776151 3.537983033 1.018613818 0.894592381 0.409958823 0.05850675 0.238619738 5.80108591 0.016414576 0.040094215 4.66E-06 5.331776151 -0.124021437 SGSMEEDVDTSPGGDYYTSPSS(ph)PTSSSR ddPTM_A459_MK2206_30min_R1 1 SGSMEEDVDTSPGGDYYTSPSSPTSSSR 28 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 SGSMEEDVDTSPGGDYYTSPS(0.238)S(0.731)PT(0.021)S(0.007)S(0.002)SR 241.51 2.31E-55 13357000 3140.1 3166.8 3163.3 2942.1 3313.5 3220.5 3196 2665.3 2409.6 2463 TRUE FALSE 2873.018006 2960.640744 2948.584009 3168.701052 3181.516279 3402.841927 2982.800671 2641.997563 2660.086543 2768.135035 1.037889398 1.069543468 1.065187923 1.144706097 1.14933565 1.229290437 1.077548831 0.954432327 0.960967044 1 11.43469861 -7.662852638 4.661676608 0.968637591 1.117071993 0.603290931 0.052126108 0.154774436 5.716235147 0.028960127 0.01594886 2.17E-08 7.662852638 0.148434402 SGSNGGGQAPGAS(ph)PSVSLPASLGR ddPTM_A459_MK2206_30min_R2 1 SGSNGGGQAPGASPSVSLPASLGR 24 0 P38432 P38432 COIL Coilin 1 SGSNGGGQAPGAS(0.98)PS(0.02)VS(0.001)LPASLGR 179.66 6.07E-17 0 16112 23036 19382 21421 22457 21208 19446 16633 17349 23891 TRUE FALSE 17345.54711 21892.06574 20028.18621 19670.83578 21575.22534 22015.0853 16892.71684 18806.99021 18857.98466 23111.43863 0.750517845 0.947239421 0.86659193 0.851129871 0.933530175 0.952562307 0.730924505 0.813752467 0.815958927 1 14.49631945 -9.56287268 10.67630799 1.000000001 0.855363324 0.268053052 0.073419809 0 0 0.072894708 0.017679563 2.74E-10 9.56287268 -0.144636676 SGSPMVPSYETS(ph)VSPQANR ddPTM_A459_MK2206_30min_R2 1 SGSPMVPSYETSVSPQANR 19 0 Q9Y2I7;E9PDH4;Q9Y2I7-2;Q9Y2I7-3;Q9Y2I7-4 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 SGS(0.013)PMVPS(0.012)Y(0.043)ET(0.199)S(0.724)VS(0.009)PQANR 163.44 6.69E-07 6095700 10957 15925 14444 14972 19654 18971 22373 14568 15870 18629 TRUE FALSE 11795.87634 15134.18766 14925.55575 13748.73971 18882.28521 19692.9547 19435.39823 16472.08762 17250.34391 18021.13726 0.654557822 0.83980203 0.828224964 0.762922978 1.047785439 1.092769808 1.078477898 0.914042626 0.957228374 1 14.13740244 -6.259598197 24.99985185 1.017810143 0.780325017 0.751881647 0.068487401 90.86181115 1233733.904 0.022144041 0.027141202 5.50E-07 6.259598197 -0.237485125 SGSPMVPSYETSVS(ph)PQANR ddPTM_A459_MK2206_30min_R2 1 SGSPMVPSYETSVSPQANR 19 0 Q9Y2I7;E9PDH4;Q9Y2I7-2;Q9Y2I7-3;Q9Y2I7-4 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 SGSPMVPS(0.016)YETSVS(0.984)PQANR 220.78 2.71E-19 6008400 26116 35750 29001 36312 41886 40396 36806 31371 37816 42784 TRUE FALSE 28115.46104 33974.70699 29967.87887 33345.19344 40241.34518 41933.29809 31973.32799 35471.29741 41105.16732 41387.96158 0.67931495 0.820883795 0.724072356 0.805673731 0.972295896 1.013176211 0.772527246 0.857043837 0.993167234 1 15.33692358 -6.079470851 4.427690738 0.922684514 0.750830993 0.564815366 0.077080574 0.189889196 6.799976111 0.023909584 0.032014719 8.33E-07 6.079470851 -0.171853521 SGSPRPT(ph)EPTDFLMLFEGSPSGK ddPTM_A459_MK2206_30min_R1 1 SGSPRPTEPTDFLMLFEGSPSGK 23 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 S(0.062)GS(0.055)PRPT(0.62)EPT(0.263)DFLMLFEGSPSGK 72.566 0.0022211 5604900 2835.4 2377.5 2844.5 2197.8 2396.9 2124.3 1976.8 2552.7 2215.9 2044.9 TRUE FALSE 2594.234341 2222.724318 2651.423265 2367.074937 2301.426397 2244.57603 1844.931279 2530.382013 2446.250735 2298.23765 1.128792899 0.96714294 1.153676716 1.029952206 1.001387475 0.97665097 0.80275914 1.101009729 1.064402863 1 11.16631227 -6.12222029 3.389582728 0.985708831 1.073704661 0.178363495 0.086414459 0.470916884 10.02329323 0.027291848 0.036824882 7.55E-07 6.12222029 0.08799583 SGSPRPTEPT(ph)DFLMLFEGS(ph)PSGK ddPTM_A459_MK2206_30min_R1 1 SGSPRPTEPTDFLMLFEGSPSGK 23 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 2 S(0.328)GS(0.102)PRPT(0.099)EPT(0.471)DFLMLFEGS(0.946)PS(0.054)GK 94.15 0.00075277 9404300 2470.1 2801.5 2744.5 2331.3 2303.7 2013.1 2533.5 2492.3 2352.2 2153.8 TRUE FALSE 2260.005024 2619.121841 2558.210987 2510.85713 2211.938751 2127.079982 2364.494838 2470.510084 2596.719607 2420.629004 0.933643702 1.08200052 1.056837286 1.037274661 0.913786767 0.878730272 0.976810091 1.02060666 1.072745804 1 11.24116627 -4.468667092 21.12339295 1.000472566 0.000180323 0.098987314 0.063010107 214.9104907 191036.2462 0.017111317 32017.17237 3.40E-05 4.468667092 -1.000292243 SGSPRPTEPTDFLMLFEGS(ph)PSGK ddPTM_A459_MK2206_30min_R1 1 SGSPRPTEPTDFLMLFEGSPSGK 23 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 SGSPRPTEPTDFLMLFEGS(0.92)PS(0.08)GK 62.582 0.013605 2077000 780.82 674.96 849.84 487.39 659.54 654.23 865.2 742.56 629.58 652.06 TRUE FALSE 714.4071588 631.0199813 792.1552286 524.9288622 633.2691252 691.2719372 807.4840866 736.0678762 695.027094 732.8421156 0.974844572 0.861058566 1.080935732 0.716291888 0.864127636 0.943275397 1.101852731 1.004401713 0.948399497 1 9.517358606 -7.009661961 20.69597542 1.015249474 0.897873109 0.249576298 0.093392506 68.12116966 145916.8944 0.034353752 0.0285577 9.78E-08 7.009661961 -0.117376365 SGSPRPTEPTDFLMLFEGSPSGK ddPTM_A459_MK2206_30min_R1 1 SGSPRPTEPTDFLMLFEGSPSGK 23 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 0 103.71 7.33E-05 4546600 4907.5 5084.5 5109.6 4994.8 5025.1 4450.9 4931.8 5023.5 5233.5 4596.2 FALSE TRUE 4490.091355 4753.498126 4762.774588 5379.500361 4824.939626 4702.906112 4602.808621 4979.580069 5777.541053 5165.611956 0.869227382 0.920219747 0.922015558 1.041406209 0.934049957 0.910425745 0.891048081 0.963986477 1.118462072 1 12.33472356 -8.080535088 5.855491663 1.056942238 0.930250741 0.517959457 0.050267081 0.190634878 10.69330982 0.035591902 0.013203031 8.31E-09 8.080535088 -0.126691497 SGSPS(ph)DNSGAEEMEVSLAKPK ddPTM_A459_MK2206_30min_R1 2 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 1 S(0.016)GS(0.054)PS(0.667)DNS(0.264)GAEEMEVSLAKPK;S(0.072)GS(0.261)PS(0.38)DNS(0.288)GAEEMEVSLAKPK 87.419 0.00052645 31382500 4513.9 4727.9 5696.9 4554.2 4417.6 4283.67 4167.9 4946.6 4774.26 4332.17 TRUE FALSE 4129.969102 4420.112851 5310.2103 4904.965273 4241.637638 4526.207694 3889.866996 4903.352398 5270.561412 4868.871926 0.848239421 0.907830996 1.090644893 1.007413082 0.871174617 0.929621432 0.798925717 1.007081819 1.082501551 1 12.24937184 -7.985932466 24.99367816 1.042431129 0.927651528 0.284675416 0.079245047 303.6358938 539467.1197 0.046479963 0.022312578 1.03E-08 7.985932466 -0.114779602 SGSPSDNS(ph)GAEEMEVSLAKPK ddPTM_A459_MK2206_30min_R1 1 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 1 S(0.001)GS(0.003)PS(0.073)DNS(0.923)GAEEMEVSLAKPK 107.02 7.42E-05 8183500 2738.5 2854.3 2724.6 2114.3 2547.4 2175.8 2527.3 2465.5 2326.7 1805.6 TRUE FALSE 2505.576195 2668.484551 2539.661743 2277.143752 2445.931664 2298.991916 2358.708428 2443.944393 2568.568791 2029.29136 1.234705003 1.314983449 1.251501777 1.122137411 1.205313201 1.132903811 1.162331085 1.204333908 1.265746675 1 10.9867603 -14.52287875 0.179958474 0.201441992 1.248151024 0.53142673 0.058207338 118.3932769 1.136265524 34.1889039 0.197975678 3.00E-15 14.52287875 1.046709032 SGSPSDNS(ph)GAEEMEVSLAKPK ddPTM_A459_MK2206_30min_R2 2 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 1 S(0.005)GS(0.005)PS(0.102)DNS(0.888)GAEEMEVSLAKPK;S(0.002)GS(0.011)PS(0.037)DNS(0.951)GAEEMEVSLAKPK 110.64 5.92E-05 19806400 42236 55647 51971 57569 58207 34558 58879 43321 38191 42047 TRUE FALSE 45469.62063 52883.6509 53703.6872 52865.42855 55921.50071 35873.12891 51148.11657 48983.20344 41512.78415 40675.00983 1.117876082 1.300150906 1.320311597 1.299702908 1.374836809 0.881945181 1.257482587 1.204257937 1.020596782 1 15.31185507 -6.733254856 24.99999438 1.097161477 1.286600016 0.43917237 0.116849712 226.6460599 201037.1065 0.038397828 0.03839048 1.85E-07 6.733254856 0.189438539 SGSS(ph)FSR ddPTM_A459_MK2206_30min_R2 1 SGSSFSR 7 0 A6PW57;Q99755-4;Q99755-3;Q99755 A6PW57 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha 1 SGS(0.07)S(0.926)FS(0.003)R 107.01 0.016879 51451000 111200 107160 97111 127960 132670 100630 129390 162210 154560 125580 TRUE FALSE 119713.5575 101838.5902 100348.6323 117505.2587 127460.7092 104459.5452 112400.9376 183411.404 168003.3494 121482.3349 0.985440045 0.838299579 0.826034768 0.967262103 1.049211882 0.859874362 0.92524512 1.50977839 1.382944686 1 16.89038702 -7.74512229 24.86794302 1.334771097 0.91903014 0.609584675 0.136896846 124.2372144 189343.4274 0.062572487 0.03598598 1.80E-08 7.74512229 -0.415740957 SGSS(ph)PGLR ddPTM_A459_MK2206_30min_R1 3 SGSSPGLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SGS(0.02)S(0.98)PGLR;SGS(0.319)S(0.681)PGLR;SGS(0.019)S(0.981)PGLR 143.37 0.0021556 198272000 15269 14009.8 11850.3 11396.6 9788.3 8866.9 15391.4 14552.6 1594.18 8703.1 TRUE FALSE 13970.29137 13097.75947 11045.93465 12274.36811 9398.411284 9368.936215 14364.66779 14425.36815 1759.900716 9781.305733 1.428264462 1.339060431 1.129290399 1.254880324 0.960854465 0.957841056 1.468583866 1.474789619 0.179924927 1 13.25581135 -1.522878746 0.183089772 0.887660762 3.151453996 0.176179447 0.334531082 116.417957 1.327210603 0.743453045 73.66300555 0.03 1.522878746 2.263793234 SGSS(ph)PGLR ddPTM_A459_MK2206_30min_R2 2 SGSSPGLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.006)GS(0.133)S(0.861)PGLR;S(0.011)GS(0.368)S(0.621)PGLR 106.68 0.013623 363553000 177876 245687 176440 204612 227836 176701 174087 175600 178134 195909 TRUE FALSE 191494.3233 233486.5408 182322.4215 187894.5451 218890.0139 183425.4804 151229.1678 198551.5229 193627.7733 189516.5054 1.010436125 1.232011641 0.962039803 0.991441588 1.154991822 0.967860187 0.797973599 1.04767404 1.021693456 1 17.53196398 -6.889825643 9.722256546 0.958358813 1.068657693 0.218010905 0.097113015 0.467178647 38.48245483 0.034898569 0.030783643 1.29E-07 6.889825643 0.11029888 SGSS(ph)QELDVKPS(ph)ASPQER ddPTM_A459_MK2206_30min_R2 1 SGSSQELDVKPSASPQER 18 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.054)GS(0.4)S(0.547)QELDVKPS(0.679)AS(0.32)PQER 135.98 0.0034216 0 28066 19717 23275 17011 17210 12633 22859 17943 14808 21707 TRUE FALSE 30214.75454 18737.88245 24050.97688 15621.14688 16534.24893 13113.75767 19857.58584 20288.21171 16095.97307 20998.70237 1.438886747 0.892335256 1.145355387 0.743910105 0.787393842 0.62450324 0.94565776 0.966165021 0.766522273 1 14.35801256 -1.918268765 0.975028739 0.842171612 200 0.583034799 0.142678669 418.960329 1.554562768 0.045791171 185041.8909 0.012070666 1.918268765 199.1578284 SGSS(ph)SPDSEITELK ddPTM_A459_MK2206_30min_R1 1 SGSSSPDSEITELK 14 0 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 SGS(0.002)S(0.499)S(0.499)PDS(0.001)EITELK 275.82 3.32E-45 62075000 4423.8 5628 5010.4 4118.8 3872.6 4023.9 5335.2 4466.3 6484.8 7359.3 TRUE FALSE 4047.53258 5261.616177 4670.308008 4436.03069 3718.346142 4251.729741 4979.298543 4427.25161 7158.918166 8271.025644 0.489362838 0.636150389 0.564658872 0.536333809 0.449562884 0.514051089 0.60201706 0.535272383 0.865541769 1 13.01385053 -8.377709532 2.931223723 0.997539505 0.540818459 0.905314715 0.051476033 0.070944607 1.13594204 0.051390626 0.0139572 4.19E-09 8.377709532 -0.456721046 SGSS(ph)SPDSEITELKFPSINHD ddPTM_A459_MK2206_30min_R2 2 SGSSSPDSEITELKFPSINHD 21 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 S(0.129)GS(0.09)S(0.459)S(0.319)PDS(0.002)EITELKFPSINHD;S(0.083)GS(0.083)S(0.465)S(0.354)PDS(0.014)EITELKFPSINHD 164.69 6.80E-09 148493000 57940 107326 71367 118983 133506 114953 119689 87184 110361 91509 TRUE FALSE 62375.93095 101996.3469 73746.34016 109261.7083 128263.8836 119327.617 103973.6905 98579.24815 119960.0003 88523.06882 0.704629107 1.152200757 0.833074826 1.234273842 1.448931734 1.347983283 1.1745378 1.113599534 1.355126996 1 16.43376585 -5.77465937 22.45699498 1.254517452 0.922191576 0.486545945 0.160086869 55.33401701 93996.97074 0.04420165 0.066147373 1.68E-06 5.77465937 -0.332325876 SGSSFVHQAS(ph)FK ddPTM_A459_MK2206_30min_R2 2 SGSSFVHQASFK 12 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 SGSSFVHQAS(1)FK;SGSSFVHQAS(1)FK 95.264 0.020157 4116300 28560.4 72370 37127.5 54227.7 63141 67734.6 62646 47990 48355 39901.3 TRUE FALSE 30747.00618 68776.21104 38365.31232 49797.12344 60661.76708 70312.28767 54420.50495 54262.45777 52560.83049 38599.32385 0.796568518 1.781798337 0.993937419 1.290103517 1.571575899 1.821593765 1.409882338 1.40578778 1.361703399 1 15.23628796 -6.096327239 6.312744716 1.466151642 1.233003761 0.099625049 0.303565744 0.535318487 29.29586033 0.086740459 0.112996336 8.01E-07 6.096327239 -0.233147882 SGSSQELDVKPS(ph)ASPQER ddPTM_A459_MK2206_30min_R1 1 SGSSQELDVKPSASPQER 18 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SGS(0.004)S(0.004)QELDVKPS(0.821)AS(0.171)PQER 90.978 0.0030482 30604000 3464.4 3422.2 3515.9 2885 3796.1 2537.4 3869.2 3211.5 3714.3 4051.4 TRUE FALSE 3169.734588 3199.414158 3277.250504 3107.2032 3644.893299 2681.065395 3611.092728 3183.422194 4100.414777 4553.318019 0.696137317 0.702655546 0.719749969 0.682404169 0.800491704 0.588815757 0.79306842 0.69914339 0.900533361 1 12.15270251 -8.413034262 2.662087816 0.999885855 0.709724111 0.75235446 0.056316797 0.113899783 1.60782211 0.049522761 0.013499107 3.86E-09 8.413034262 -0.290161744 SGSSQELDVKPSAS(ph)PQER ddPTM_A459_MK2206_30min_R1 1 SGSSQELDVKPSASPQER 18 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SGSSQELDVKPS(0.005)AS(0.995)PQER 202.61 4.96E-10 7579700 1271.2 1364.5 1344.2 1316.7 1190.5 1094.4 1126.1 1291.9 1493 1681 TRUE FALSE 1163.077765 1275.670802 1252.959449 1418.112462 1143.079864 1156.363982 1050.979924 1280.605055 1648.202693 1889.254971 0.615627738 0.675224267 0.663202939 0.750619945 0.605042666 0.612074072 0.556293322 0.677836012 0.872408816 1 10.8836017 -8.385967107 2.576806164 0.995162576 0.642069327 0.856589455 0.049257278 0.098452347 1.272384055 0.050814709 0.0139701 4.11E-09 8.385967107 -0.353093249 SGSSS(ph)PDSEITELK ddPTM_A459_MK2206_30min_R1 3 SGSSSPDSEITELK 14 0 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 SGS(0.002)S(0.023)S(0.975)PDSEITELK;SGS(0.002)S(0.046)S(0.951)PDSEITELK;SGSS(0.271)S(0.728)PDSEITELK 321.86 1.55E-109 196692000 18173.9 21586.8 21289 15190.9 14339.8 17000.6 21419.6 17286.8 26845.4 29455.4 TRUE FALSE 16628.11437 20181.4954 19843.96199 16360.90575 13768.6154 17963.15928 19990.73757 17135.66333 29636.0754 33104.55733 0.502290794 0.609628916 0.599432936 0.494219137 0.415912989 0.542618924 0.603866633 0.517622488 0.895226452 1 15.01474222 -8.346192358 3.540811988 0.994343009 0.53617299 0.891681012 0.057825703 0.074295215 1.667973823 0.059395936 0.016017617 4.51E-09 8.346192358 -0.458170019 SGSSS(ph)PDSEITELK ddPTM_A459_MK2206_30min_R2 4 SGSSSPDSEITELK 14 0 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 SGS(0.112)S(0.263)S(0.622)PDS(0.003)EITELK;SGS(0.003)S(0.014)S(0.982)PDS(0.001)EITELK;SGSS(0.012)S(0.988)PDSEITELK;SGSS(0.178)S(0.821)PDSEITELK 308.84 7.45E-94 190846600 356622 265143 280110 261750 262664 195616 354029 273946 209074 353212 TRUE FALSE 383925.2545 251976.3842 289448.7276 240364.1877 252350.4916 203060.304 307544.567 309751.6828 227258.8786 341686.7214 1.123617719 0.73744857 0.847117285 0.703463649 0.738543455 0.594287958 0.900077609 0.90653708 0.665108898 1 18.38231466 -4.757079844 24.96116578 0.780243131 1.123618238 0.417916445 0.118480491 123.3721453 706293.399 0.028725357 0.220398408 1.75E-05 4.757079844 0.343375107 SGSSS(ph)PDSEITELKFPSINHD ddPTM_A459_MK2206_30min_R1 4 SGSSSPDSEITELKFPSINHD 21 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 S(0.006)GS(0.031)S(0.157)S(0.801)PDS(0.004)EITELKFPSINHD;S(0.008)GS(0.036)S(0.166)S(0.779)PDS(0.011)EITELKFPSINHD;S(0.03)GS(0.03)S(0.151)S(0.777)PDS(0.012)EITELKFPSINHD;S(0.009)GS(0.038)S(0.172)S(0.781)PDSEITELKFPSINHD 211.03 3.92E-18 712199700 13545 9857 11682.3 8933.1 15926.2 15053.3 15660.4 14814.1 9183.7 8359.85 TRUE FALSE 12392.92662 9215.307508 10889.33802 9621.12891 15291.82573 15905.60484 14615.72329 14684.58189 10138.37848 9395.531332 1.3190235 0.980818134 1.158991189 1.024011157 1.627563699 1.692890405 1.555603699 1.562932565 1.079063878 1 13.19775904 -6.25449281 24.93728272 1.468279472 1.113452937 0.272937991 0.23089079 599.7361042 2152973.459 0.06762963 0.085359616 5.57E-07 6.25449281 -0.354826535 SGSSS(ph)PDSEITELKFPSINHD ddPTM_A459_MK2206_30min_R2 2 SGSSSPDSEITELKFPSINHD 21 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 S(0.012)GS(0.046)S(0.183)S(0.741)PDS(0.019)EITELKFPSINHD;S(0.046)GS(0.046)S(0.178)S(0.712)PDS(0.019)EITELKFPSINHD 140.88 9.86E-06 139029000 41770.2 80897.3 59246.1 99699 109367 88138 96853 68745.9 92220 76833 TRUE FALSE 44968.15863 76880.05772 61221.3354 91553.27278 105072.7021 91492.15335 84136.08476 77731.22517 100241.1289 74325.9455 0.605012938 1.034363669 0.823687274 1.231780802 1.41367461 1.230958486 1.131988086 1.045815491 1.348669408 1 16.18157829 -5.761109823 24.99999062 1.209629083 0.842355457 0.563880047 0.152403071 6.518973245 494442.5234 0.04186661 0.067126192 1.73E-06 5.761109823 -0.367273626 SGSSSPDS(ph)EITELKFPSINHD ddPTM_A459_MK2206_30min_R1 1 SGSSSPDSEITELKFPSINHD 21 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 S(0.003)GS(0.012)S(0.058)S(0.28)PDS(0.647)EITELKFPSINHD 158.35 7.88E-08 141200000 2934.5 1783 2997.8 2052.2 4103.7 3863.6 3591.5 3543.7 1924.6 1546.3 TRUE FALSE 2684.905365 1666.926376 2794.317688 2210.2608 3940.240939 4082.353693 3351.917588 3512.717805 2124.669057 1737.867318 1.544942665 0.959179311 1.607900476 1.271823675 2.267285252 2.349059477 1.928753452 2.021280778 1.222572653 1 10.76310222 -6.238048753 24.79881106 1.883297444 1.337044085 0.193247261 0.431958192 982.0016408 1041120.79 0.125650192 0.16211313 5.78E-07 6.238048753 -0.54625336 SGSSSPDS(ph)EITELKFPSINHD ddPTM_A459_MK2206_30min_R2 1 SGSSSPDSEITELKFPSINHD 21 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 S(0.04)GS(0.04)S(0.158)S(0.158)PDS(0.604)EITELKFPSINHD 112.91 4.99E-05 14114000 8840.6 16924 14117 17884 22337 23496 30289 13939 21267 15875 TRUE FALSE 9517.443133 16083.57877 14587.65373 16422.81999 21459.93715 24390.15674 26312.01792 15760.87516 23116.76522 15357.00005 0.619746246 1.047312543 0.949902565 1.069402874 1.397404251 1.588211022 1.713356634 1.026299089 1.505291733 1 13.9066088 -6.043461567 2.164789813 1.402977819 0.878148546 0.482375199 0.233742879 0.271067845 2.529474272 0.074863871 0.113060517 9.05E-07 6.043461567 -0.524829273 SGST(ph)GSSLSVSVR ddPTM_A459_MK2206_30min_R2 1 SGSTGSSLSVSVR 13 0 Q5TH69 Q5TH69 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 1 S(0.001)GS(0.275)T(0.72)GS(0.002)S(0.002)LSVSVR 130.69 0.0037414 5015800 8652.8 16843 11318 12123 11826 9822.7 15491 11690 9552.5 12433 TRUE FALSE 9315.265021 16006.60111 11695.33647 11132.51212 11361.65182 10196.50973 13457.01309 13217.92314 10383.35918 12027.31223 0.774509287 1.330854376 0.972398176 0.925602654 0.944654267 0.847779582 1.118871186 1.098992268 0.863315011 1 13.55402666 -5.429242683 22.79356012 0.973188048 1.077416243 0.039787279 0.149877612 68.53805197 16675.96614 0.037600062 0.078270762 3.72E-06 5.429242683 0.104228194 SGST(ph)SPLGFAR ddPTM_A459_MK2206_30min_R1 2 SGSTSPLGFAR 11 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 S(0.002)GS(0.001)T(0.498)S(0.498)PLGFAR;S(0.002)GS(0.003)T(0.497)S(0.497)PLGFAR 173.04 0.00049847 54189000 9686.4 10523.8 9921 7771.2 9650 8415.5 10195.9 9901.5 8746.2 7681.1 TRUE FALSE 8862.520815 9838.698707 9247.590161 8369.739171 9265.620066 8891.978337 9515.750114 9814.932229 9655.398789 8632.692657 1.026622998 1.139702188 1.071228935 0.969539807 1.073317496 1.030035319 1.102292239 1.13694911 1.118468961 1 13.07559491 -7.280793127 23.26120272 1.10084002 1.053869486 0.091933642 0.053154705 680.8446973 818298.1927 0.022337833 0.015094305 5.24E-08 7.280793127 -0.046970534 SGST(ph)SPLGFAR ddPTM_A459_MK2206_30min_R2 2 SGSTSPLGFAR 11 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 SGS(0.003)T(0.499)S(0.499)PLGFAR;S(0.008)GS(0.002)T(0.495)S(0.495)PLGFAR 145.14 0.0016537 43290000 146218 169252 159596 184863 175513 167300 181408 155571 175316 157193 TRUE FALSE 157412.5625 160847.1918 164916.851 169759.1016 168621.4777 173666.7187 157588.9117 175904.6639 190564.6688 152063.8053 1.035174427 1.057761191 1.08452403 1.116367575 1.108886348 1.142064796 1.036334132 1.156781941 1.253188873 1 17.21431727 -5.051928312 0.786115947 1.124561899 0.999568334 0.157211211 0.064314057 3.436173285 2.114178038 0.026053018 0.35120063 8.87E-06 5.051928312 -0.124993565 SGSTS(ph)PLGFAR ddPTM_A459_MK2206_30min_R2 1 SGSTSPLGFAR 11 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 S(0.001)GS(0.014)T(0.188)S(0.797)PLGFAR 114.24 0.0066371 9512900 41236 53994 45648 51424 53329 57476 53115 41843 54186 43735 TRUE FALSE 44393.05987 51312.73647 47169.88154 47222.4947 51235.0355 59663.28946 46140.9367 47312.02377 58899.00033 42307.93053 1.049284598 1.212839669 1.114918195 1.116161772 1.211003111 1.410215265 1.090597817 1.118277901 1.392150351 1 15.3686405 -4.755440922 24.49203808 1.189364574 1.049284302 0.097358874 0.123484596 372.5854003 1521090.691 0.030017761 0.263409249 1.76E-05 4.755440922 -0.140080273 SGSYSGRS(ph)PSPYGR ddPTM_A459_MK2206_30min_R1 1 SGSYSGRSPSPYGR 14 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 SGSYSGRS(0.496)PS(0.496)PY(0.007)GR 109.99 0.020849 5147600 2162.4 1798.3 1689.1 1503.2 1964.9 1796.3 1569.6 1398.1 1172.2 702.67 TRUE FALSE 1978.476525 1681.230343 1574.448598 1618.976724 1886.633872 1898.004954 1464.894848 1385.876559 1294.054385 789.7220645 2.505282065 2.128888654 1.993674318 2.050058872 2.388984628 2.403383467 1.854949879 1.754891526 1.63862002 1 9.625201189 -8.364839987 0.816895135 1.017373723 2.227341039 0.822839443 0.178192151 0.262327896 0.389356967 0.184046819 0.068968466 4.32E-09 8.364839987 1.209967316 SGT(ph)FDLLEMDR ddPTM_A459_MK2206_30min_R1 1 SGTFDLLEMDR 11 0 H0YA31;H0YA26;E9PHT6;Q9NVE7 H0YA31 PANK4 Pantothenate kinase 4 1 S(0.044)GT(0.956)FDLLEMDR 182.25 8.78E-05 2377000 563.78 555.06 548.28 615.83 498.6 947.76 1234.2 1231.7 1802.9 1783.5 TRUE FALSE 515.8275505 518.9254931 511.0642812 663.2613333 478.7397062 1001.421352 1151.86877 1220.931377 1990.317907 2004.453445 0.257340749 0.258886279 0.254964406 0.330893858 0.238838027 0.49959821 0.574654788 0.609109371 0.992947934 1 10.96899319 -7.762480633 0.770433688 1.031134103 0.254972984 0.939931756 0.068638297 0.135664178 0.152821695 0.06077418 0.028108462 1.73E-08 7.762480633 -0.776161119 down SGT(ph)PPRQGSITSPQANEQSVTPQR ddPTM_A459_MK2206_30min_R1 2 SGTPPRQGSITSPQANEQSVTPQR 24 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.196)GT(0.78)PPRQGS(0.024)ITSPQANEQSVTPQR;S(0.115)GT(0.507)PPRQGS(0.372)IT(0.005)S(0.002)PQANEQSVTPQR 94.259 1.93E-05 21049000 820.69 1101.66 989.74 901.3 1012.34 825.69 777.22 934.67 958.62 522.66 TRUE FALSE 750.8860059 1029.941734 922.5592064 970.7182822 972.0163541 872.4398543 725.3730719 926.4982787 1058.271979 587.4110667 1.278297343 1.753357729 1.570551286 1.652536592 1.654746411 1.485228835 1.234864498 1.577257105 1.801586724 1 9.198226636 -6.931313456 6.679464515 1.438964505 1.593519856 0.111914878 0.227535111 0.542067673 41.96203864 0.079072039 0.069566386 1.17E-07 6.931313456 0.154555351 SGT(ph)PTQDEMMDKPTSSSVDTMSLLSK ddPTM_A459_MK2206_30min_R1 2 SGTPTQDEMMDKPTSSSVDTMSLLSK 26 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.047)GT(0.662)PT(0.183)QDEMMDKPT(0.021)S(0.051)S(0.015)S(0.017)VDT(0.003)MSLLSK;S(0.182)GT(0.597)PT(0.182)QDEMMDKPT(0.022)S(0.007)S(0.005)S(0.001)VDT(0.003)MSLLSK 95.963 5.43E-06 97126000 4351.6 5648.4 5433.1 4693.1 3703 3083.7 4134.8 4348.7 5106.9 4182.3 TRUE FALSE 3981.473569 5280.688133 5064.316309 5054.563375 3555.501669 3258.296429 3858.975036 4310.679774 5637.78053 4700.434899 0.847043658 1.123446712 1.077414413 1.075339513 0.756419724 0.693190417 0.820982552 0.91708105 1.199416788 1 12.19857853 -6.239539148 24.52597662 0.87962627 1.040756731 0.154912613 0.147796515 1083.174581 1213041.835 0.046104395 0.059467279 5.76E-07 6.239539148 0.161130461 SGT(ph)PTQDEMMDKPTSSSVDTMSLLSK ddPTM_A459_MK2206_30min_R2 2 SGTPTQDEMMDKPTSSSVDTMSLLSK 26 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.142)GT(0.674)PT(0.153)QDEMMDKPT(0.006)S(0.006)S(0.007)S(0.008)VDT(0.002)MSLLSK;S(0.162)GT(0.552)PT(0.281)QDEMMDKPT(0.002)S(0.002)S(0.001)SVDTMSLLSK 72.573 0.00064194 21370300 85107 81652 76559 63769 74468 48763 89737 64537 54893 84265 TRUE FALSE 91622.85736 77597.28041 79111.43885 58558.86871 71544.01215 50618.71013 77954.42411 72972.20749 59667.49392 81515.43995 1.123993901 0.951933529 0.970508641 0.718377632 0.877674367 0.620970827 0.95631483 0.895194917 0.731977819 1 16.31478573 -4.990292154 1.327613144 0.826234706 1.169544324 0.372810302 0.114290545 0.952337801 1.953056849 0.033328722 0.400675772 1.02E-05 4.990292154 0.343309618 SGT(ph)TPKPVINSTPGR ddPTM_A459_MK2206_30min_R1 1 SGTTPKPVINSTPGR 15 1 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 SGT(0.876)T(0.123)PKPVINS(0.001)TPGR 139 0.0040967 13121000 3450.3 4013.2 3438.3 3434 3081.1 3685.2 2937.2 3011.2 2757.7 2815.8 TRUE FALSE 3156.833867 3751.939951 3204.917776 3698.487275 2958.373263 3893.852839 2741.264747 2984.873396 3044.372784 3164.642562 0.997532519 1.185580955 1.012726623 1.168690366 0.934820664 1.230424215 0.866216229 0.94319448 0.961995778 1 11.62782685 -7.280173684 24.90225134 0.938117831 1.085961132 0.378228456 0.091246571 795.7183974 1057690.569 0.035006177 0.02364825 5.25E-08 7.280173684 0.147843301 SGTAETEPVEQDSS(ph)QPSLPLVR ddPTM_A459_MK2206_30min_R1 2 SGTAETEPVEQDSSQPSLPLVR 22 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0;H7C3N7 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 SGTAETEPVEQDS(0.065)S(0.935)QPSLPLVR;SGTAETEPVEQDS(0.091)S(0.909)QPSLPLVR 210.58 1.05E-23 8662900 3019.4 2528.47 2816.4 2958.8 3092.4 2613.5 2785.1 2851.2 2322.4 2248.42 TRUE FALSE 2762.584174 2363.866143 2625.230615 3186.687289 2969.22316 2761.474111 2599.311061 2826.272259 2563.821791 2526.971244 1.093239261 0.935454311 1.038884246 1.261069866 1.175012643 1.092799975 1.028627083 1.118442588 1.014582891 1 11.30319353 -10.63952043 14.62503316 1.000000102 1.086018509 0.080109522 0.085440284 0 0 0.089800982 0.021779937 2.29E-11 10.63952043 0.086018407 SGTLS(ph)PEIFEK ddPTM_A459_MK2206_30min_R1 2 SGTLSPEIFEK 11 0 O60673-2;O60673 O60673-2 REV3L DNA polymerase zeta catalytic subunit 1 S(0.019)GT(0.043)LS(0.937)PEIFEK;S(0.003)GT(0.009)LS(0.989)PEIFEK 129.34 0.0026033 7439300 4498.4 4059.3 4355.4 4169.6 5047.8 3777.7 4259.7 4622.7 4675.7 3689 TRUE FALSE 4115.787458 3795.038832 4059.767583 4490.743314 4846.735437 3991.590109 3975.543185 4582.284221 5161.755747 4146.021171 0.992707777 0.915344779 0.979196057 1.083145293 1.169008849 0.962751984 0.958881545 1.105224511 1.244990205 1 12.01751177 -5.68092726 4.622838387 1.07366191 0.953153923 0.267079371 0.08577646 0.297461694 11.51965086 0.025101802 0.044187088 2.08E-06 5.68092726 -0.120507987 SGTNS(ph)PPPPFSDWGR ddPTM_A459_MK2206_30min_R1 1 SGTNSPPPPFSDWGR 15 0 D6RAU6;D6REP2;D6RAJ6;Q9UKT5-2;Q9UKT5 D6RAU6 FBXO4 F-box only protein 4 1 S(0.081)GT(0.201)NS(0.717)PPPPFS(0.001)DWGR 126.07 0.0011751 23805000 4804.7 5533.2 5323 4196.4 5270.2 4769.6 5022.1 4616.7 4175.4 3961.2 TRUE FALSE 4396.035035 5172.987674 4961.689591 4519.607455 5060.276774 5039.65063 4687.084872 4576.336679 4609.447772 4451.943362 0.987441815 1.161961699 1.114499711 1.015198777 1.136644464 1.132011398 1.052817723 1.027941352 1.035378799 1 12.12021952 -7.505512933 4.62560895 1.025661425 1.094312165 0.270714464 0.05164689 0.270087542 14.92890641 0.023589048 0.014419219 3.12E-08 7.505512933 0.068650739 SGTNS(ph)PPPPFSDWGR ddPTM_A459_MK2206_30min_R2 1 SGTNSPPPPFSDWGR 15 0 D6RAU6;D6REP2;D6RAJ6;Q9UKT5-2;Q9UKT5 D6RAU6 FBXO4 F-box only protein 4 1 S(0.005)GT(0.308)NS(0.688)PPPPFSDWGR 87.363 0.018735 14483000 63783 80167 69936 85478 71489 72824 76388 68275 70394 66632 TRUE FALSE 68666.27552 76186.02335 72267.63133 78494.17397 68681.98266 75595.36835 66358.16384 77198.77692 76516.74288 64457.8033 1.065290345 1.181951904 1.121161871 1.217760612 1.065534026 1.172788468 1.029482242 1.197663789 1.187082695 1 15.9760674 -6.286553132 24.96409632 1.11787942 1.14725775 0.053065395 0.072244926 3063.134366 3044876.574 0.021654273 0.024570809 5.17E-07 6.286553132 0.029378331 SGTPPRQGS(ph)ITSPQANEQSVTPQR ddPTM_A459_MK2206_30min_R2 2 SGTPPRQGSITSPQANEQSVTPQR 24 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.011)GT(0.044)PPRQGS(0.919)IT(0.02)S(0.006)PQANEQSVTPQR;S(0.044)GT(0.137)PPRQGS(0.814)IT(0.003)S(0.002)PQANEQSVTPQR 89.462 3.54E-05 16198800 3286.5 11055 11060.5 10602.1 11941.5 8326.8 11112.6 4172.5 10277.7 10146.5 TRUE FALSE 3538.116967 10506.02478 11429.25155 9735.874516 11472.61671 8643.682209 9653.502271 4717.860076 11171.63577 9815.420536 0.360465143 1.070359109 1.164417918 0.991895811 1.168835983 0.880622708 0.983503685 0.480657967 1.138171893 1 13.26083437 SGTPT(ph)QDEMMDKPTSSSVDTMSLLSK ddPTM_A459_MK2206_30min_R2 5 SGTPTQDEMMDKPTSSSVDTMSLLSK 26 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.051)GT(0.348)PT(0.54)QDEMMDKPT(0.02)S(0.015)S(0.011)S(0.009)VDT(0.004)MS(0.002)LLSK;S(0.107)GT(0.12)PT(0.205)QDEMMDKPT(0.145)S(0.148)S(0.148)S(0.113)VDT(0.011)MS(0.004)LLSK;S(0.021)GT(0.187)PT(0.791)QDEMMDKPTSSSVDTMSLLSK;S(0.061)GT(0.23)PT(0.708)QDEMMDKPTSSSVDTMSLLSK;S(0.088)GT(0.394)PT(0.511)QDEMMDKPT(0.001)S(0.001)S(0.002)S(0.002)VDT(0.001)MSLLSK 92.147 3.58E-05 79652600 236046 254553 254379 221904 236852 153974 271437 200254 162374 271928 TRUE FALSE 254117.8632 241912.2682 262859.8689 203773.7334 227552.0004 159833.5885 235796.9958 226427.8854 176496.997 263055.0116 0.966025554 0.919626152 0.999258168 0.774643038 0.865035792 0.607605183 0.896379029 0.860762485 0.670950901 1 18.00500501 -5.76461466 24.99974993 0.802329646 0.95743559 0.292173941 0.106987076 96.16637461 757150.5537 0.028586105 0.044489435 1.72E-06 5.76461466 0.155105944 SGTPTQDEMMDKPT(ph)SSSVDTMSLLSK ddPTM_A459_MK2206_30min_R1 2 SGTPTQDEMMDKPTSSSVDTMSLLSK 26 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.065)GT(0.33)PT(0.065)QDEMMDKPT(0.395)S(0.125)S(0.011)S(0.004)VDT(0.005)MSLLSK;S(0.021)GT(0.063)PT(0.023)QDEMMDKPT(0.626)S(0.209)S(0.051)S(0.005)VDT(0.002)MSLLSK 77.675 0.00023657 75466000 6656 8254 8749.2 7488.8 5512.5 4734.1 5764.9 6179.4 6945.6 6514.3 TRUE FALSE 6089.872248 7716.6631 8155.328681 8065.588674 5292.925452 5002.140651 5380.33404 6125.374157 7667.619975 7321.340664 0.831797416 1.053995908 1.113911926 1.101654607 0.72294484 0.683227414 0.734883717 0.836646516 1.047297254 1 12.83789214 -6.257324926 24.99677387 0.816487842 1.03371339 0.321218696 0.131435616 401.0165361 2436316.895 0.041191756 0.051238603 5.53E-07 6.257324926 0.217225548 SGTSSPQS(ph)PVFR ddPTM_A459_MK2206_30min_R1 6 SGTSSPQSPVFR 12 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 S(0.096)GT(0.018)S(0.004)S(0.002)PQS(0.879)PVFR;SGTSS(0.001)PQS(0.998)PVFR;S(0.003)GT(0.001)S(0.002)S(0.03)PQS(0.964)PVFR;SGTSSPQS(1)PVFR;SGTS(0.002)S(0.002)PQS(0.996)PVFR;S(0.002)GT(0.025)S(0.002)S(0.037)PQS(0.934)PVFR 173.33 0.00018814 791817000 16448.8 17361.3 17641.1 14788.7 17650.2 16282.2 18129.1 17119.8 15065.9 13731.5 TRUE FALSE 15049.74318 16231.07621 16443.67128 15927.72824 16947.15516 17204.08409 16919.74082 16970.12339 16632.05422 15432.66189 0.975187773 1.051735361 1.065511018 1.032079129 1.098135583 1.11478397 1.096359198 1.09962387 1.077717787 1 13.9136993 -3.227181204 0.753208194 1.083692226 1.68E-14 0.431497989 0.033141762 20.76093783 1.367859155 0.012151905 31.64671391 0.000592678 3.227181204 -1.083692226 SGTSSPQS(ph)PVFR ddPTM_A459_MK2206_30min_R2 5 SGTSSPQSPVFR 12 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 SGTS(0.001)S(0.029)PQS(0.97)PVFR;SGT(0.008)S(0.019)S(0.085)PQS(0.887)PVFR;SGTSS(0.001)PQS(0.999)PVFR;S(0.001)GTSS(0.018)PQS(0.981)PVFR;S(0.007)GT(0.003)S(0.042)S(0.192)PQS(0.756)PVFR 182.72 0.00010424 848914300 274601 320780 303882 377465 457074 389939 462573 308134 358142 381087 TRUE FALSE 295624.6637 304850.5317 314013.2742 346624.902 439126.9781 404778.4019 401836.6095 348408.1718 389292.5438 368652.1624 0.801906767 0.82693271 0.85178742 0.940249203 1.191168866 1.097995463 1.090015604 0.945086473 1.055988771 1 18.49190069 -5.946477061 3.420901575 1.064355694 0.827024024 0.743566558 0.062263054 0.125200328 3.011703308 0.019650225 0.029844534 1.13E-06 5.946477061 -0.23733167 SGVGTGPPS(ph)PIALPPLR ddPTM_A459_MK2206_30min_R2 4 SGVGTGPPSPIALPPLR 17 0 Q92630 Q92630 DYRK2 Dual specificity tyrosine-phosphorylation-regulated kinase 2 1 SGVGT(0.028)GPPS(0.972)PIALPPLR;S(0.001)GVGT(0.204)GPPS(0.796)PIALPPLR;SGVGT(0.487)GPPS(0.512)PIALPPLR;S(0.012)GVGT(0.006)GPPS(0.982)PIALPPLR 125.61 0.0012334 16589500 36998.6 44338.5 42269.6 45137.8 46902.2 41976.3 49011.6 37113.1 46067.8 46097.2 TRUE FALSE 39831.24126 42136.71456 43678.84737 41449.89735 45060.58396 43573.73751 42576.31805 41963.9096 50074.69397 44593.05214 0.893216305 0.944916585 0.979498941 0.929514697 1.01048441 0.977141851 0.954774702 0.941041431 1.122925917 1 15.44453133 -1.522878745 0.217935673 1.021552431 0.42229952 0.340681668 0.048047622 65.08978672 0.827783251 0.075631268 13.67651935 0.03 1.522878745 -0.599252911 SGVS(ph)LAALK ddPTM_A459_MK2206_30min_R2 1 SGVSLAALK 9 0 P10412;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 1 S(0.007)GVS(0.993)LAALK 99.283 0.018946 2635700 13594 15025 13430 15840 15803 13165 19067 17595 12071 15299 TRUE FALSE 14634.76709 14278.88035 13877.7495 14545.82133 15182.49482 13666.0033 16563.48 19894.72691 13120.91376 14799.79488 0.988849319 0.964802584 0.937698773 0.982839387 1.025858462 0.923391399 1.119169565 1.344256935 0.886560514 1 13.85328956 -7.273436503 23.63640651 1.116184861 0.971887228 0.190804352 0.111867552 484.7701425 955074.5545 0.044461646 0.030279295 5.33E-08 7.273436503 -0.144297633 SGVSS(ph)DNEDDDDEEDGNYLHPSLFASK ddPTM_A459_MK2206_30min_R1 2 SGVSSDNEDDDDEEDGNYLHPSLFASK 27 0 Q12872;Q12872-2 Q12872 SFSWAP "Splicing factor, suppressor of white-apricot homolog" 1 S(0.004)GVS(0.156)S(0.84)DNEDDDDEEDGNYLHPSLFASK;S(0.016)GVS(0.425)S(0.559)DNEDDDDEEDGNYLHPSLFASK 166.74 1.36E-21 17977200 3008.07 1432.78 2112.28 1235.81 4843 5206.4 4218.45 2836.65 1614.3 1284.89 TRUE FALSE 2752.21785 1339.505762 1968.904319 1330.9923 4650.093055 5501.181869 3937.044897 2811.849468 1782.112262 1444.071874 1.905873178 0.927589399 1.363439282 0.921693944 3.220125771 3.809493121 2.726349685 1.947167256 1.23408834 1 10.49592683 -6.2488872 24.96823102 2.464734145 1.26048683 0.261589182 0.838329972 988.3199484 1965920.784 0.262757232 0.336880803 5.64E-07 6.2488872 -1.204247316 SGVSS(ph)DNEDDDDEEDGNYLHPSLFASK ddPTM_A459_MK2206_30min_R2 2 SGVSSDNEDDDDEEDGNYLHPSLFASK 27 0 Q12872;Q12872-2 Q12872 SFSWAP "Splicing factor, suppressor of white-apricot homolog" 1 S(0.018)GVS(0.198)S(0.784)DNEDDDDEEDGNYLHPSLFASK;S(0.014)GVS(0.212)S(0.775)DNEDDDDEEDGNYLHPSLFASK 130.53 4.00E-12 7893900 19379.1 45386 31483 83204 75162 97395 69729 47844 67019 41797 TRUE FALSE 20862.7788 43132.19724 32532.62751 76405.96704 72210.76222 101101.435 60573.49854 54097.37507 72848.19148 40433.16731 0.515981809 1.066752869 0.8046025 1.889685427 1.785928905 2.500457958 1.498114112 1.33794552 1.801693914 1 15.3032516 -5.756055819 24.97361472 1.731830194 0.822876163 0.520749215 0.390237428 102.9046164 477353.8159 0.107919067 0.180174241 1.75E-06 5.756055819 -0.908954031 SGVTNMS(ph)SPHK ddPTM_A459_MK2206_30min_R2 1 SGVTNMSSPHK 11 0 Q9NVG8 Q9NVG8 TBC1D13 TBC1 domain family member 13 1 SGVT(0.012)NMS(0.649)S(0.339)PHK 88.338 0.030787 8237600 30855 34913 32930 38218 41993 36403 42855 30387 34430 34491 TRUE FALSE 33217.28252 33179.27119 34027.86976 35095.46715 40344.14382 37788.34167 37228.08702 34358.68523 37424.65916 33365.56149 0.995555928 0.994416689 1.019850056 1.051847042 1.209155249 1.132555245 1.11576384 1.029764934 1.121655308 1 15.02607216 -5.926012336 3.81057345 1.10698806 1.002846526 0.390466577 0.05441133 0.224019364 6.451270104 0.016117644 0.024572278 1.19E-06 5.926012336 -0.104141534 SGVTNMSS(ph)PHK ddPTM_A459_MK2206_30min_R2 2 SGVTNMSSPHK 11 0 Q9NVG8 Q9NVG8 TBC1D13 TBC1 domain family member 13 1 SGVT(0.001)NMS(0.071)S(0.928)PHK;SGVTNMS(0.038)S(0.961)PHK 98.368 0.018317 9205600 93388 102503 85918 101940 101834 91775 112952 93148 95086 111122 TRUE FALSE 100537.8571 97412.85007 88782.46324 93611.17591 97835.48549 95267.56193 98121.26672 105322.7634 103356.4084 107496.0982 0.935269826 0.906198938 0.825913356 0.870833244 0.910130573 0.886242045 0.9127891 0.979782198 0.96148986 1 16.71392477 -7.658260192 2.606643827 0.98076972 0.887111159 0.673572751 0.028374713 0.180387731 2.459817205 0.01790581 0.008736588 2.20E-08 7.658260192 -0.093658561 SGYHDDS(ph)DEDLLE ddPTM_A459_MK2206_30min_R2 1 SGYHDDSDEDLLE 13 0 Q99523-2;Q99523 Q99523-2 SORT1 Sortilin 1 S(0.006)GYHDDS(0.994)DEDLLE 77.74 0.042504 8077300 48116 59090 59315 68161 63193 62714 69331 51284 63188 55144 TRUE FALSE 51799.79795 56155.67652 61292.5325 62592.02826 60711.7253 65100.62522 60227.75642 57986.99488 68683.97802 53344.6558 0.971040064 1.052695452 1.148991058 1.173351432 1.138103234 1.220377641 1.129030744 1.087025383 1.287551246 1 15.70305612 -5.017518443 2.191075609 1.154495852 0.961676054 0.385516683 0.07203468 0.38494597 3.005992096 0.018191766 0.120268683 9.60E-06 5.017518443 -0.192819798 SGYIS(ph)ESENSEISQQVR ddPTM_A459_MK2206_30min_R1 2 SGYISESENSEISQQVR 17 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 S(0.001)GYIS(0.961)ES(0.039)ENSEISQQVR;SGYIS(0.956)ES(0.044)ENSEISQQVR 208.59 4.58E-09 9975100 3057.2 2497 2897.1 2520.1 3233.3 2952.6 2828.5 2736.6 2470.7 1989.15 TRUE FALSE 2797.169086 2334.444846 2700.452924 2714.198539 3104.510814 3119.77366 2639.815926 2712.674195 2727.538106 2235.580919 1.25120458 1.044222925 1.207942374 1.214090939 1.388681925 1.395509164 1.180818776 1.213409084 1.220057875 1 11.12643405 -9.249070766 1.163426853 0.999573052 1.238769547 0.357339485 0.095050314 5.694487507 8.006380888 0.106450558 0.030980757 5.64E-10 9.249070766 0.239196495 SGYIS(ph)ESENSEISQQVR ddPTM_A459_MK2206_30min_R2 3 SGYISESENSEISQQVR 17 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 S(0.001)GYIS(0.979)ES(0.011)ENS(0.009)EISQQVR;S(0.001)GYIS(0.985)ES(0.014)ENSEISQQVR;S(0.008)GYIS(0.979)ES(0.013)ENSEISQQVR 189.84 6.44E-08 12065400 50891.9 50491.3 49448.2 60081 48833 55892.8 69806 54941.3 43447.9 50743.3 TRUE FALSE 54788.22299 47983.97546 51096.77831 55172.19011 46915.57105 58019.83967 60640.38835 62122.31655 47226.91981 49087.55028 1.11613276 0.977518234 1.04093152 1.123954848 0.955752951 1.181966493 1.235351693 1.265541185 0.962095675 1 15.58306955 -6.78220503 24.99565549 1.152234895 1.043626392 0.132452953 0.101866691 382.3827609 460271.5541 0.035088717 0.030978302 1.65E-07 6.78220503 -0.108608502 SGYISES(ph)ENSEISQQVR ddPTM_A459_MK2206_30min_R1 1 SGYISESENSEISQQVR 17 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 SGYIS(0.038)ES(0.962)ENSEISQQVR 176.44 9.36E-08 3733500 1246.1 1290.5 1292.4 967.29 1344.1 1221.1 1272.4 1101.9 1100.8 485.28 TRUE FALSE 1140.112651 1206.488215 1204.675489 1041.790843 1290.561651 1290.237627 1187.520518 1092.266204 1215.232099 545.4001501 2.090414994 2.212115665 2.208792001 1.910140368 2.366265669 2.365671565 2.177338084 2.002687759 2.228147717 1 9.091171287 -11.00550026 0.681787631 0.476069385 2.180444329 0.869197619 0.136510343 32.27087248 5.511707207 29.98353532 0.051796842 9.87E-12 11.00550026 1.704374944 SGYMS(ph)DSDLMGK ddPTM_A459_MK2206_30min_R2 1 SGYMSDSDLMGK 12 0 A0A0A0MRJ3;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-6 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 S(0.01)GYMS(0.973)DS(0.018)DLMGK 91.307 0.023218 2399900 21470 21418 21304 29895 24405 23209 24600 17401 23509 24723 TRUE FALSE 23113.75971 20354.41326 22014.26473 27452.48287 23446.73707 24092.23476 21369.99045 19675.37045 25553.77033 23916.29053 0.966444176 0.851068991 0.920471538 1.147857057 0.980366794 1.007356669 0.893532817 0.822676511 1.068467131 1 14.54570602 -5.544771043 24.99639343 0.982039692 0.903009823 0.13493026 0.087111009 470.03493 536678.7096 0.024819608 0.04299325 2.85E-06 5.544771043 -0.079029869 SGYS(ph)SPGSPGTPGSR ddPTM_A459_MK2206_30min_R1 2 SGYSSPGSPGTPGSR 15 0 A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636;P10636-9;I3L170;P10636-3;P10636-4;P10636-5;P10636-7;P10636-8;P10636-2;P10636-6 A0A0G2JQJ7;P10636-2 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 S(0.007)GYS(0.459)S(0.459)PGS(0.075)PGTPGSR;S(0.002)GYS(0.476)S(0.476)PGS(0.046)PGTPGSR 201.3 1.62E-05 45801000 9040 9966 9272.2 8088.8 9766.4 8966.5 8926.5 8526.7 7821.8 6728.2 TRUE FALSE 8271.100529 9317.211589 8642.828898 8711.800778 9377.383607 9474.175481 8331.029472 8452.151961 8634.904101 7561.740211 1.093809136 1.23215177 1.14296824 1.152089405 1.2401092 1.252909412 1.101734421 1.117752227 1.141920227 1 12.88450257 -8.778583018 0.726355932 1.000852642 1.181207132 0.485667648 0.052966086 0.916212926 0.975979055 0.055218249 0.020135787 1.67E-09 8.778583018 0.18035449 SGYSS(ph)PGSPGTPGSR ddPTM_A459_MK2206_30min_R1 1 SGYSSPGSPGTPGSR 15 0 A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636;P10636-9;I3L170;P10636-3;P10636-4;P10636-5;P10636-7;P10636-8;P10636-2;P10636-6 A0A0G2JQJ7;P10636-2 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 SGYS(0.211)S(0.763)PGS(0.02)PGT(0.004)PGS(0.001)R 115.83 0.0023287 2628600 2450.1 2596.5 2263.2 2026.3 2173.5 2594.3 2926.9 2816.1 1806.7 2024.9 TRUE FALSE 2241.706129 2427.467378 2109.58029 2182.365977 2086.924893 2741.187024 2731.651841 2791.479135 1994.51293 2275.759899 0.985036308 1.066662339 0.926978409 0.958961434 0.917023317 1.204515039 1.20032515 1.22661408 0.876416238 1 11.15213264 -6.75518714 24.99932047 1.121909425 0.973143752 0.263464148 0.106505246 186.6675218 746381.4826 0.035670257 0.034822195 1.76E-07 6.75518714 -0.148765673 SGYSS(ph)PGSPGTPGSR ddPTM_A459_MK2206_30min_R2 3 SGYSSPGSPGTPGSR 15 0 A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636;P10636-9;I3L170;P10636-3;P10636-4;P10636-5;P10636-7;P10636-8;P10636-2;P10636-6 A0A0G2JQJ7;P10636-2 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 SGYS(0.105)S(0.82)PGS(0.072)PGT(0.003)PGSR;SGYS(0.073)S(0.9)PGS(0.027)PGTPGSR;SGYS(0.034)S(0.955)PGS(0.011)PGTPGSR 243.92 1.66E-20 40593000 129230 142030 151736 171912 163898 161247 167256 135510 137605 149941 TRUE FALSE 139123.9482 134976.9967 156794.8025 157866.2397 157462.541 167383.3676 145295.0863 153221.6223 149573.6342 145048.4374 0.959155097 0.930564983 1.080982362 1.088369116 1.085585917 1.153982563 1.001700458 1.056347969 1.031197832 1 17.14617523 -5.261573704 24.9999736 1.067160169 0.944860031 0.533322734 0.043741129 8.376270406 1559252.648 0.011481502 0.026633215 5.48E-06 5.261573704 -0.122300138 SGYSSPGS(ph)PGTPGSR ddPTM_A459_MK2206_30min_R1 1 SGYSSPGSPGTPGSR 15 0 A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636;P10636-9;I3L170;P10636-3;P10636-4;P10636-5;P10636-7;P10636-8;P10636-2;P10636-6 A0A0G2JQJ7;P10636-2 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 SGYSS(0.009)PGS(0.988)PGT(0.003)PGSR 134.06 0.00048395 3948700 1780.4 1489.9 1353.6 1204.7 1931.9 1639.4 1721.3 1648.1 1183.7 980.71 TRUE FALSE 1628.967631 1392.907239 1261.721403 1297.486203 1854.948332 1732.221411 1606.475218 1633.690835 1306.749851 1102.207759 1.477913413 1.263742909 1.144721939 1.177170268 1.682938917 1.571592467 1.457506722 1.482198635 1.185574898 1 10.10618047 -8.499477194 3.849633008 1.001236094 1.401359955 0.401638018 0.16115092 0.216860278 8.104164887 0.174695509 0.045894727 3.17E-09 8.499477194 0.400123861 SGYSSPGSPGT(ph)PGSR ddPTM_A459_MK2206_30min_R1 1 SGYSSPGSPGTPGSR 15 0 A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636;P10636-9;I3L170;P10636-3;P10636-4;P10636-5;P10636-7;P10636-8;P10636-2;P10636-6 A0A0G2JQJ7;P10636-2 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 SGYSS(0.003)PGS(0.17)PGT(0.824)PGS(0.002)R 104.09 0.012229 3483600 1726.4 1788.3 1785.5 1659.3 1669.1 1715 2032.1 1609.3 1468.6 1392.4 TRUE FALSE 1579.560614 1671.881345 1664.305235 1787.099574 1602.616213 1812.101818 1896.542317 1595.23006 1621.266225 1564.901024 1.009367743 1.068362356 1.063521085 1.141988884 1.024100686 1.157965769 1.211924772 1.019380801 1.036018381 1 10.6118557 -4.562658003 1.409906473 1.090598206 0.939266707 0.089013754 0.065712941 4.866725302 5.976176285 0.019369029 1.209062265 2.74E-05 4.562658003 -0.151331498 SHDDGNIDLES(ph)DSFLKFDSEPSAVALELPTR ddPTM_A459_MK2206_30min_R1 1 SHDDGNIDLESDSFLKFDSEPSAVALELPTR 31 1 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;P18583-8 P18583-10 SON Protein SON 1 SHDDGNIDLES(0.795)DS(0.202)FLKFDS(0.003)EPSAVALELPTR 99.641 1.26E-08 3778400 752.17 568.56 713.13 585.49 641.76 534.75 732.81 744.31 628.25 523.93 TRUE FALSE 688.1939917 531.5466407 664.7247225 630.5845412 616.1973403 565.0270829 683.925582 737.8025761 693.5588357 588.8384039 1.168731501 0.902703759 1.128874608 1.070895745 1.046462554 0.959562215 1.161482637 1.252979716 1.177842395 1 9.201727956 -7.369598887 8.290685986 1.170270723 1.044697868 0.209898203 0.092997021 0.388546631 26.98296561 0.037152022 0.024976073 4.27E-08 7.369598887 -0.125572855 SHDDGNIDLESDSFLKFDS(ph)EPSAVALELPTR ddPTM_A459_MK2206_30min_R1 1 SHDDGNIDLESDSFLKFDSEPSAVALELPTR 31 1 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;P18583-8 P18583-10 SON Protein SON 1 SHDDGNIDLES(0.109)DS(0.364)FLKFDS(0.494)EPS(0.033)AVALELPTR 66.399 0.00014744 2785200 428.44 332.25 315.3 294.75 381.41 333.67 298.35 324.87 378.88 325.97 TRUE FALSE 391.9989282 310.6204646 293.8983145 317.4516961 366.2176321 352.562107 278.4476159 322.0296958 418.2659318 366.3536245 1.070001501 0.847870592 0.802225759 0.866517143 0.999628794 0.962354631 0.760051484 0.879013265 1.141699996 1 8.517093079 -8.249906242 24.82948649 1.070849998 0.893387924 0.35408636 0.092932761 641.2784 1380604.777 0.065134705 0.02414584 5.62E-09 8.249906242 -0.177462074 SHEAEVLK ddPTM_A459_MK2206_30min_R1 1 SHEAEVLK 8 0 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 0 99.442 0.026201 5605600 5504.5 5841.6 5517.6 4810.1 4308.9 4426 5794.8 5641.5 1113.4 3997.8 FALSE TRUE 5036.31337 5461.310778 5143.080685 5180.574735 4137.267389 4676.596295 5408.239465 5592.17696 1229.141914 4493.077646 1.120905038 1.215494414 1.144667662 1.15301251 0.920809235 1.040844754 1.203682618 1.244620592 0.273563471 1 12.13348828 -8.24228957 24.9766816 0.636781643 1.127020735 0.532472984 0.185030642 501.5051075 654104.7007 0.117837974 0.044385442 5.72E-09 8.24228957 0.490239093 SHEGETAYIR ddPTM_A459_MK2206_30min_R1 3 SHEGETAYIR 10 0 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 0 ;; 161.51 0.00059601 44211500 3301.71 3426.87 3738.74 2910.14 3543.23 3525.07 3389.96 3192.62 2033.72 3114.71 FALSE TRUE 3020.882227 3203.78014 3484.964746 3134.279487 3402.095646 3724.656417 3163.821954 3164.70726 2245.132472 3500.58379 0.862965268 0.915213099 0.99553816 0.895359082 0.971865223 1.064010074 0.903798379 0.904051281 0.641359444 1 11.77337982 -8.016084253 23.55794166 0.804688244 0.945574433 0.198651517 0.096979619 435.6304723 638043.2123 0.058649104 0.023625145 9.64E-09 8.016084253 0.140886188 SHEGETAYIR ddPTM_A459_MK2206_30min_R2 4 SHEGETAYIR 10 0 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 0 ;;; 157.75 0.00068418 33833600 11395.3 19893.3 16054.1 21910.2 21599 30055 17175.2 23623.9 29606.1 22495.9 FALSE TRUE 12267.73293 18905.42765 16589.33568 20120.06657 20750.91473 31198.76409 14920.07561 26711.62484 32181.18506 21761.86063 0.563726289 0.868741326 0.762312376 0.924556357 0.953545062 1.433644146 0.685606615 1.227451333 1.478788308 1 14.40951429 -5.595928282 0.550353852 1.188207759 0.517621149 0.414096942 0.221679862 1.955814836 0.833301822 0.146548839 0.76044516 2.54E-06 5.595928282 -0.67058661 SHELDIDENPAS(ph)DFDDSGSLLGFK ddPTM_A459_MK2206_30min_R1 2 SHELDIDENPASDFDDSGSLLGFK 24 0 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 SHELDIDENPAS(0.986)DFDDS(0.013)GS(0.001)LLGFK;SHELDIDENPAS(1)DFDDSGSLLGFK 157.95 8.49E-13 8662100 3300.4 3386.2 4050.7 3037.48 3692.4 3465.1 3332.98 3630.7 3168.1 3034.7 TRUE FALSE 3019.683649 3165.757765 3775.74977 3271.427236 3545.323889 3661.290968 3110.642986 3598.957173 3497.435332 3410.661547 0.885365964 0.928194639 1.107043228 0.959176744 1.039482763 1.073484108 0.912035083 1.055207948 1.025441922 1 11.73583588 -5.055221707 8.023886584 1.019850404 0.895652956 0.438560433 0.052872878 0.231958352 31.46255466 0.012879569 0.034946178 8.81E-06 5.055221707 -0.124197448 SHESNAPGS(ph)AGGQASEKPR ddPTM_A459_MK2206_30min_R2 2 SHESNAPGSAGGQASEKPR 19 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 SHESNAPGS(1)AGGQASEKPR;SHESNAPGS(0.999)AGGQAS(0.001)EKPR 105.65 0.00047016 3630000 1287.45 7349.8 2949.1 9150.9 8297.3 10531.6 6801.3 5119.1 8443.2 3188.8 TRUE FALSE 1386.018162 6984.81962 3047.421522 8403.242198 7971.506311 10932.38742 5908.28114 5788.183946 9177.574274 3084.749717 0.449313004 2.264306754 0.987899117 2.724124473 2.584166316 3.544011158 1.915319453 1.876386896 2.97514389 1 11.59093772 -4.761309933 24.51510503 2.257687022 0.449311345 0.316957723 0.77138278 2.906247433 547695.0717 0.191484873 1.074192275 1.73E-05 4.761309933 -1.808375677 SHGIDLDHNR ddPTM_A459_MK2206_30min_R1 1 SHGIDLDHNR 10 0 C9JR83;Q9NTJ3-2;Q9NTJ3;E9PD53;C9JVD8;C9J578;C9J9E4 C9JR83 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 0 140.83 0.01904 1168900 646.17 514.18 666.82 717.05 945.45 879.02 935.52 1055 586.61 532.23 FALSE TRUE 591.2098483 480.7067885 621.5581163 772.2773152 907.7907245 928.7893528 873.1131678 1045.776246 647.5902087 598.1666705 0.98836976 0.803633523 1.039105231 1.291073798 1.517621708 1.552726687 1.459648641 1.748302434 1.082625028 1 9.224403716 -5.769480978 2.421579258 1.440788337 0.897952889 0.467590972 0.213962664 0.21302035 2.547698274 0.060346918 0.110614693 1.70E-06 5.769480978 -0.542835448 SHGS(ph)PAPSTSSTCR ddPTM_A459_MK2206_30min_R1 1 SHGSPAPSTSSTCR 14 0 Q14123;A0A0A0MS69;Q14123-3 Q14123 PDE1C "Calcium/calmodulin-dependent 3,5-cyclic nucleotide phosphodiesterase 1C" 1 S(0.041)HGS(0.959)PAPSTSSTCR 91.932 0.010815 752280 423.63 348.72 417.48 230.12 293.16 242.66 239.39 352.57 225.74 351.82 TRUE FALSE 387.5980439 326.0182646 389.1426208 247.8438823 281.4828164 256.3991995 223.4207299 349.4875177 249.2064808 395.4061177 0.980253027 0.824514973 0.984159332 0.626808416 0.711882806 0.648445201 0.565041156 0.883869778 0.630254489 1 8.627191382 -5.758654262 24.99999143 0.708672682 0.919129716 0.339283378 0.130231101 76.79540758 689320.7514 0.033786732 0.055339005 1.74E-06 5.758654262 0.210457034 SHGS(ph)PAPSTSSTCR ddPTM_A459_MK2206_30min_R2 2 SHGSPAPSTSSTCR 14 0 Q14123;A0A0A0MS69;Q14123-3 Q14123 PDE1C "Calcium/calmodulin-dependent 3,5-cyclic nucleotide phosphodiesterase 1C" 1 S(0.288)HGS(0.709)PAPS(0.001)T(0.001)S(0.001)STCR;S(0.001)HGS(0.999)PAPSTSSTCR 102.5 0.0086378 1033600 0 1279.77 1382.13 3466.2 1798.3 2780.98 2749.64 1559.16 0 2960.81 TRUE FALSE 0 1216.218483 1428.209524 3183.000372 1727.689706 2886.812143 2388.608965 1762.947565 0 2864.199012 0 0.424627785 0.498641861 1.11130559 0.603201698 1.007895097 0.833953561 0.615511547 0 1 11.48391602 -5.022664043 1.871864236 0.72856388 2.43E-12 0.349707382 0.302044531 0.606986422 3.170064156 0.08513563 0.65864406 9.49E-06 5.022664043 -0.72856388 SHHAPMS(ph)PGSSGGGGQPLAR ddPTM_A459_MK2206_30min_R1 2 SHHAPMSPGSSGGGGQPLAR 20 0 O14497-2;O14497 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 SHHAPMS(0.996)PGS(0.003)S(0.001)GGGGQPLAR;SHHAPMS(0.999)PGSSGGGGQPLAR 106.58 0.00031001 19918500 4623.51 2443.34 2522.42 2107.78 5614 5332.04 4776 3406.34 2133.07 2028.74 TRUE FALSE 4230.256195 2284.278122 2351.205158 2270.121581 5390.382492 5633.935497 4457.401754 3376.558729 2354.81026 2280.075627 1.855313984 1.001843138 1.031196128 0.995634335 2.36412443 2.47094238 1.954935924 1.480897689 1.03277726 1 11.15486596 -6.235508564 24.80163313 1.790890557 1.191785827 0.172949058 0.515260162 1104.583974 1056483.615 0.161156537 0.207978926 5.81E-07 6.235508564 -0.59910473 SHHAPMS(ph)PGSSGGGGQPLAR ddPTM_A459_MK2206_30min_R2 4 SHHAPMSPGSSGGGGQPLAR 20 0 O14497-2;O14497 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 SHHAPMS(0.966)PGS(0.024)S(0.01)GGGGQPLAR;SHHAPMS(0.996)PGS(0.003)S(0.001)GGGGQPLAR;S(0.001)HHAPMS(0.998)PGSSGGGGQPLAR;S(0.084)HHAPMS(0.817)PGS(0.078)S(0.021)GGGGQPLAR 117.02 0.00049478 12803600 13899.4 40640 25001 58966.6 56349.5 62993.8 43682.1 29390.9 31803.9 32916.6 TRUE FALSE 14963.54875 38621.8767 25834.52086 54148.84016 54136.9355 65391.0732 37946.5878 33232.39154 34570.14573 31842.53404 0.469923302 1.212902109 0.811321135 1.700519189 1.700145329 2.053576299 1.191694975 1.04364783 1.085659379 1 14.95866753 -5.747555586 24.97962418 1.429783061 0.869533961 0.331895198 0.364062104 296.8363009 534061.2582 0.106213015 0.182765056 1.79E-06 5.747555586 -0.5602491 SHHLDEDEERER ddPTM_A459_MK2206_30min_R1 1 SHHLDEDEERER 12 1 F5GWA4;Q9H3F6-2;Q9H3F6;F5GWK6;F5H268;B3KVY5;Q9H3F6-3 F5GWA4 KCTD10 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 0 84.31 0.026126 2912300 1484 731.48 1106 914.33 2109.3 1625.4 1602.5 1206.2 470.51 402.4 FALSE TRUE 1357.778007 683.860519 1030.927801 984.751855 2025.282114 1717.428743 1495.600149 1195.654321 519.4211982 452.25235 3.002257495 1.512121538 2.279541061 2.17743889 4.478212473 3.797500983 3.307003599 2.643776911 1.148520728 1 8.820984189 SHIAQWS(ph)PHTPPR ddPTM_A459_MK2206_30min_R1 2 SHIAQWSPHTPPR 13 0 P40189-3;P40189 P40189-3 IL6ST Interleukin-6 receptor subunit beta 1 SHIAQWS(0.992)PHT(0.008)PPR;SHIAQWS(0.999)PHT(0.001)PPR 94.922 0.010198 12126400 4540.5 4096.8 4458.8 4202.9 4275.9 4295.3 5157.7 5003.9 4939.9 4953.1 TRUE FALSE 4154.306632 3830.097575 4156.149079 4526.608086 4105.581849 4538.496174 4813.639244 4960.15143 5453.420283 5566.727422 0.746274484 0.688033971 0.746605458 0.813154254 0.737521624 0.815289816 0.864716175 0.891035442 0.979645646 1 12.44261373 -7.592316372 0.630366895 1.010220589 0.727252271 0.91182406 0.029599904 0.205237769 0.163458078 0.028148978 0.016470679 2.56E-08 7.592316372 -0.282968318 SHIAQWS(ph)PHTPPR ddPTM_A459_MK2206_30min_R2 2 SHIAQWSPHTPPR 13 0 P40189-3;P40189 P40189-3 IL6ST Interleukin-6 receptor subunit beta 1 SHIAQWS(0.978)PHT(0.022)PPR;S(0.001)HIAQWS(0.977)PHT(0.021)PPR 88.951 0.015287 11257400 32255 39212 30418 38541 42003 42700 45413 24977 33762 48090 TRUE FALSE 34724.4676 37264.7891 31432.12094 35392.07701 40353.75117 44324.97842 39450.21855 28241.57966 36698.55773 46520.82724 0.746428421 0.801034533 0.675656965 0.760779185 0.867434084 0.952798586 0.848011974 0.607073892 0.788862965 1 15.50558913 -6.119721248 5.990102371 0.829669054 0.742664524 0.173584602 0.102521495 0.529031983 23.88400037 0.032502297 0.042334816 7.59E-07 6.119721248 -0.087004529 SHIAQWSPHT(ph)PPR ddPTM_A459_MK2206_30min_R2 1 SHIAQWSPHTPPR 13 0 P40189-3;P40189 P40189-3 IL6ST Interleukin-6 receptor subunit beta 1 SHIAQWS(0.009)PHT(0.991)PPR 111.11 0.0072727 5349000 14150 17829 13997 18507 17280 12461 21150 11898 12238 19143 TRUE FALSE 15233.33488 16943.63779 14463.65299 16994.9189 16601.50037 12935.21209 18372.97959 13453.10945 13302.43912 18518.36548 0.822606882 0.914964002 0.781043716 0.917733205 0.896488429 0.698507225 0.992149097 0.726473914 0.718337649 1 14.17666914 SHIAS(ph)PSPCPDR ddPTM_A459_MK2206_30min_R1 1 SHIASPSPCPDR 12 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 SHIAS(0.995)PS(0.005)PCPDR 145.14 0.00069123 6332200 1835.7 2073.1 2239.9 1613.8 2141.5 2230.2 2374.4 1841.5 2259.5 1537 TRUE FALSE 1679.564075 1938.140813 2087.861829 1738.095156 2056.19952 2356.471997 2216.008108 1825.39996 2494.383111 1727.415164 0.972299023 1.121989001 1.208662441 1.006182643 1.190333143 1.364160768 1.282846275 1.056723362 1.443997461 1 10.75439914 -6.51065767 23.97821784 1.240958169 1.090910384 0.214489864 0.136470005 532.0140511 1043834.708 0.041604595 0.044779688 3.09E-07 6.51065767 -0.150047785 SHIAS(ph)PSPCPDR ddPTM_A459_MK2206_30min_R2 1 SHIASPSPCPDR 12 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 S(0.027)HIAS(0.89)PS(0.083)PCPDR 145.29 0.00068703 12588000 26873 29913 29067 45829 40497 37314 38413 28781 26185 33122 TRUE FALSE 28930.41754 28427.56392 30036.07927 42084.6241 38906.8843 38734.01042 33369.32696 32542.77552 28462.52397 32041.23185 0.90291215 0.887218196 0.937419616 1.313452126 1.214275546 1.208880189 1.041449564 1.015653071 0.888309292 1 14.96764199 -5.548875334 24.95094756 1.106815043 0.899378498 0.354386836 0.116859602 230.6475475 221369.2803 0.03477536 0.060234922 2.83E-06 5.548875334 -0.207436545 SHIEIIR ddPTM_A459_MK2206_30min_R1 2 SHIEIIR 7 0 P00390-5;P00390-4;P00390-2;P00390-3;P00390 P00390-5 GSR "Glutathione reductase, mitochondrial" 0 ; 130.04 0.0043336 4830900 6940.5 7418.2 6904.3 6741 7820.4 7292.3 8075.3 7233.1 6477.7 6175.5 FALSE TRUE 6350.174029 6935.273832 6435.655352 7260.192988 7508.896908 7705.183724 7536.611471 7169.861769 7151.080096 6940.567563 0.914935842 0.999237277 0.927252029 1.046051771 1.08188514 1.11016623 1.085878266 1.033036809 1.030330738 1 12.76083793 -5.83773257 5.661800537 1.062501439 0.95260972 0.645214752 0.036545227 0.123973489 6.778002407 0.010531633 0.015967579 1.45E-06 5.83773257 -0.109891718 SHIEIIR ddPTM_A459_MK2206_30min_R2 2 SHIEIIR 7 0 P00390-5;P00390-4;P00390-2;P00390-3;P00390 P00390-5 GSR "Glutathione reductase, mitochondrial" 0 ; 98.418 0.030727 11328000 37362 50708 37917 49115 44103 56740 45451 32685.9 41991 46146 FALSE TRUE 40222.46345 48189.91446 39181.13386 45102.14739 42371.29462 58899.28046 39483.2291 36958.05936 45643.30128 44640.2598 0.901035604 1.079516891 0.877708464 1.010346884 0.949172223 1.319420647 0.884475791 0.827908698 1.022469436 1 15.4460578 SHILEDDENS(ph)VDISMLK ddPTM_A459_MK2206_30min_R1 6 SHILEDDENSVDISMLK 17 0 O75717;O75717-2 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(0.989)VDIS(0.011)MLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK 212.74 1.32E-09 119459500 44540 46172.27 47380.95 43595.78 47238.65 40493.18 43912.42 41220.41 38860.99 35774.27 TRUE FALSE 40751.63911 43166.44683 44164.86312 46953.53453 45357.03454 42785.86886 40983.10258 40860.0243 42900.72898 40206.25665 1.013564617 1.073625113 1.098457474 1.167816615 1.128108865 1.064159472 1.019321519 1.016260346 1.067016245 1 15.2951324 -7.021416207 4.455883459 1.027994078 1.099195789 0.405769323 0.04011821 0.22927214 11.10281672 0.016735474 0.013531354 9.52E-08 7.021416207 0.07120171 SHILEDDENS(ph)VDISMLK ddPTM_A459_MK2206_30min_R2 4 SHILEDDENSVDISMLK 17 0 O75717;O75717-2 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 S(0.018)HILEDDENS(0.976)VDIS(0.006)MLK;SHILEDDENS(0.803)VDIS(0.197)MLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(0.994)VDIS(0.006)MLK 92.098 0.0061308 21349400 101523 157401 127394 167418 159357 136519 159438 109968 91889 135092 TRUE FALSE 109295.6789 149584.6952 131641.2524 153739.4139 153099.8435 141714.3262 138503.5991 124341.1952 99881.33912 130683.9591 0.836335842 1.14462935 1.007325255 1.176421459 1.171527436 1.084404905 1.059836265 0.951464862 0.764296856 1 16.99572254 -7.86470484 3.332075444 0.875612443 1.078958773 0.334899919 0.107288354 0.250047003 5.367153034 0.065688562 0.028435097 1.37E-08 7.86470484 0.20334633 SHISDQS(ph)PLSSK ddPTM_A459_MK2206_30min_R1 2 SHISDQSPLSSK 12 0 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 SHIS(0.001)DQS(0.999)PLSSK;SHISDQS(0.976)PLS(0.024)SK 192.4 2.35E-19 2964400 4002.2 1859.97 2103 1486.89 4532.1 4474.6 4819.4 3176.4 1564.75 1576.54 TRUE FALSE 3661.791874 1738.885615 1960.254219 1601.410525 4351.57686 4727.947985 4497.906619 3148.62907 1727.411362 1771.853677 2.066644622 0.981393462 1.106329628 0.903805176 2.455945948 2.668362543 2.538531639 1.777025445 0.974917615 1 10.79104375 -6.256244436 24.95341265 2.01141346 1.233017269 0.186122307 0.627848962 632.9492731 3040308.249 0.195133079 0.244383883 5.54E-07 6.256244436 -0.778396191 SHISDQS(ph)PLSSK ddPTM_A459_MK2206_30min_R2 2 SHISDQSPLSSK 12 0 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 SHISDQS(0.998)PLS(0.001)SK;SHISDQS(1)PLSSK 116.78 0.0032596 75622000 91212 260815 132337 379684 342374 393557 367714 197655 224735 215374 TRUE FALSE 98195.26085 247863.3064 136749.0495 348662.6027 328930.6765 408534.0874 319432.7101 223489.1872 244282.0441 208346.364 0.471307773 1.18966946 0.656354385 1.673475821 1.578768499 1.960840974 1.533181112 1.072681005 1.172480476 1 17.6686244 -5.758631951 24.99999242 1.463323154 0.814166347 0.458891448 0.323297804 68.94783079 613962.162 0.092831297 0.152077968 1.74E-06 5.758631951 -0.649156807 SHISDQSPLS(ph)SK ddPTM_A459_MK2206_30min_R1 2 SHISDQSPLSSK 12 0 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 SHISDQS(0.014)PLS(0.984)S(0.001)K;SHISDQS(0.179)PLS(0.82)S(0.001)K 257.2 5.87E-25 81463000 21163.6 7925.5 10833.5 6820.3 24087.2 23516.2 21928 15266.9 7945.1 7974.9 TRUE FALSE 19363.52469 7409.548509 10098.1522 7345.600688 23127.75582 24847.66692 20465.22313 15133.4231 8771.021577 8962.890819 2.160410639 0.826691818 1.126662414 0.819557087 2.580390221 2.772282673 2.283328397 1.688453358 0.978592929 1 13.12974841 -6.251406835 24.97059028 1.982660369 1.196665734 0.179689643 0.659114028 1059.701527 2637552.559 0.203365375 0.259443938 5.61E-07 6.251406835 -0.785994635 SHISETPLDSESPQQAEVS(ph)PDAK ddPTM_A459_MK2206_30min_R2 1 SHISETPLDSESPQQAEVSPDAK 23 0 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 SHISETPLDSESPQQAEVS(1)PDAK 110.78 1.01E-05 3626700 12692 19549 14967 26859 27493 28823 31616 21049 23035 20624 TRUE FALSE 13663.70928 18578.22509 15465.99231 24664.53378 26413.48668 29919.87946 27464.78122 23800.17657 25038.54266 19951.04057 0.684861987 0.931190783 0.775197276 1.236253001 1.323915241 1.499665111 1.376608961 1.192929085 1.254999336 1 14.28417637 -5.804590777 5.103629338 1.297927494 0.808543333 0.717839201 0.135045577 0.09629938 5.69989908 0.03829571 0.059657528 1.57E-06 5.804590777 -0.489384161 SHLDS(ph)PEAR ddPTM_A459_MK2206_30min_R1 1 SHLDSPEAR 9 0 K7ER08;K7EP90;Q9BTD8-4;Q9BTD8-2;Q9BTD8-3;Q9BTD8 K7ER08 RBM42 RNA-binding protein 42 1 S(0.003)HLDS(0.997)PEAR 115.23 0.0082322 9937600 3623.7 4055.1 3671.2 3056.8 4033.7 3356.3 3639.1 3623.5 2141.2 2443.3 TRUE FALSE 3315.485286 3791.112253 3422.009173 3292.235266 3873.029187 3546.330806 3396.342279 3591.820122 2363.785402 2745.99445 1.207389653 1.380597201 1.246182115 1.198922768 1.410428629 1.291455926 1.236835085 1.308021625 0.860812156 1 11.42311299 -8.256692267 24.98733266 0.930406059 1.286797366 0.793269587 0.072398393 146.3031685 770105.3406 0.050720789 0.017759291 5.54E-09 8.256692267 0.356391308 SHLDS(ph)PEAR ddPTM_A459_MK2206_30min_R2 2 SHLDSPEAR 9 0 K7ER08;K7EP90;Q9BTD8-4;Q9BTD8-2;Q9BTD8-3;Q9BTD8 K7ER08 RBM42 RNA-binding protein 42 1 S(0.12)HLDS(0.88)PEAR;S(0.002)HLDS(0.998)PEAR 99.53 0.018725 13734700 134802 150237 140521 179469 130728 122433 150479 131015 117963 143255 TRUE FALSE 145122.5448 142776.449 145205.9 164805.8086 125594.9619 127092.2736 130720.9265 148139.1103 128223.2085 138580.6011 1.047206778 1.030277311 1.047808271 1.189241548 0.906295404 0.917100031 0.943284453 1.068974367 0.925260877 1 17.08036579 -6.282996388 24.99272175 0.960605214 1.072977686 0.480223779 0.060270699 773.2245723 896456.8053 0.019399148 0.02201455 5.21E-07 6.282996388 0.112372472 SHLDSPEAR ddPTM_A459_MK2206_30min_R2 1 SHLDSPEAR 9 0 K7ER08;K7EP90;Q9BTD8-4;Q9BTD8-2;Q9BTD8-3;Q9BTD8 K7ER08 RBM42 RNA-binding protein 42 0 111.06 0.01474 1082100 12350 18403 15030 19607 15843 17847 15116 13825 13145 16142 FALSE TRUE 13295.5255 17489.13378 15531.0927 18005.04538 15220.92422 18526.18009 13131.25104 15631.97497 14288.32834 15615.28786 0.851442869 1.120000728 0.994608158 1.153039607 0.974745029 1.186412973 0.840922765 1.001068639 0.91502177 1 13.93067154 -7.274246677 24.99361588 0.939342359 1.049233716 0.216712782 0.100011462 1175.26336 2293532.569 0.038833774 0.026388444 5.32E-08 7.274246677 0.109891356 SHLEPSGNPLPATPTTSAPSAPPAS(ph)SQGPDTAPRPSPPQEEAR ddPTM_A459_MK2206_30min_R2 2 SHLEPSGNPLPATPTTSAPSAPPASSQGPDTAPRPSPPQEEAR 43 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 SHLEPSGNPLPATPT(0.001)T(0.001)S(0.001)APS(0.019)APPAS(0.472)S(0.472)QGPDT(0.024)APRPS(0.011)PPQEEAR;SHLEPSGNPLPATPTTSAPS(0.013)APPAS(0.303)S(0.303)QGPDT(0.19)APRPS(0.19)PPQEEAR 71.645 1.23E-08 25457000 46140 62030 50667 87911 73739 76259 80070 54535 57852 75716 TRUE FALSE 49672.51388 58949.6804 52356.21249 80728.39009 70843.63635 79161.08968 69556.71282 61662.91175 62883.86239 73245.39312 0.678165708 0.804824411 0.714805536 1.10216338 0.967209449 1.080765442 0.949639422 0.841867442 0.858536759 1 16.1604504 -5.743424529 24.97689524 0.968334481 0.739821029 0.63544305 0.082829026 171.6265715 237951.7147 0.024163139 0.041742926 1.81E-06 5.743424529 -0.228513452 SHLEPSGNPLPATPTTSAPSAPPASSQGPDTAPRPS(ph)PPQEEAR ddPTM_A459_MK2206_30min_R2 1 SHLEPSGNPLPATPTTSAPSAPPASSQGPDTAPRPSPPQEEAR 43 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 SHLEPSGNPLPATPTTS(0.001)APS(0.004)APPAS(0.115)S(0.115)QGPDT(0.065)APRPS(0.7)PPQEEAR 83.127 2.62E-10 13193000 26848 41288 31987 44654 41732 43507 52507 35971 34522 45990 TRUE FALSE 28903.50352 39237.69796 33053.43062 41005.62536 40093.39199 45162.68937 45612.76783 40672.53321 37524.66116 44489.35007 0.649672416 0.881957095 0.742951528 0.921695311 0.901190778 1.015134842 1.025251386 0.914208303 0.843452671 1 15.4411724 -3.737807626 0.51307476 0.959473822 1.23E-09 0.594262126 0.072452286 8.729481041 0.776669058 0.04199506 6.353861878 0.000182891 3.737807626 -0.959473821 SHLEVPLEENVNRR ddPTM_A459_MK2206_30min_R1 1 SHLEVPLEENVNRR 14 1 Q96CT7;M0R2F5 Q96CT7 CCDC124 Coiled-coil domain-containing protein 124 0 87.719 0.014644 3598300 1335.1 1240.5 1172.3 836.31 2277.8 2327.7 2437.6 1322.6 944.18 1184.3 FALSE TRUE 1221.542734 1159.743225 1092.727542 900.7227411 2187.070403 2459.492362 2274.992152 1311.036648 1042.33089 1331.020025 0.917749328 0.871319141 0.820970024 0.676716146 1.643153643 1.847825214 1.70920956 0.984986419 0.783106843 1 10.37831656 -6.253511094 24.91737128 1.372343314 0.825182347 0.358164619 0.32886806 683.0721107 2146787.892 0.108979021 0.138075868 5.58E-07 6.253511094 -0.547160967 SHLGNVHDQDN ddPTM_A459_MK2206_30min_R1 2 SHLGNVHDQDN 11 0 Q8WW12;Q8WW12-3 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 0 ; 163.84 0.00010567 0 3849.6 3136.9 3163.3 2965.1 2849.9 2968 3506.8 3785.2 379.898 2279.41 FALSE TRUE 3522.171305 2932.68724 2948.584009 3193.472516 2736.382448 3136.045595 3272.867771 3752.106395 419.3897566 2561.800519 1.374881174 1.1447758 1.150981112 1.246573452 1.068148135 1.224156827 1.277565425 1.464636441 0.163708983 1 11.32294243 -8.251226449 24.98476886 0.581854458 1.232245199 0.599657756 0.216228936 380.6590547 931244.6663 0.138137519 0.050886128 5.61E-09 8.251226449 0.650390742 SHLNLDDRR ddPTM_A459_MK2206_30min_R1 1 SHLNLDDRR 9 1 Q5SY16 Q5SY16 NOL9 Polynucleotide 5-hydroxyl-kinase NOL9 0 97.965 0.027402 0 286.8 284.32 310.43 409.03 330.15 331.68 300.9 372.94 240.05 213.19 FALSE TRUE 262.406154 265.8107163 289.3588765 440.5335615 316.9994264 350.459435 280.82751 369.6794249 265.0040565 239.6015867 1.095177029 1.109386294 1.207666779 1.838608698 1.323027242 1.462675769 1.17206031 1.542892224 1.106019623 1 7.904493652 -10.87760294 4.136527224 0.999292615 1.330260565 0.147571717 0.227069686 0.001511799 0.000235832 0.224381202 0.054306639 1.33E-11 10.87760294 0.33096795 SHNLMDR ddPTM_A459_MK2206_30min_R2 1 SHNLMDR 7 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 0 98.629 0.030536 1588300 3794 4640 3994.4 6400.3 5116.4 3883.9 4050.9 4831.9 3311.8 5567.4 FALSE TRUE 4084.471557 4409.584347 4127.571302 5877.375016 4915.504428 4031.704536 3519.011964 5463.44592 3599.854378 5385.736194 0.758386859 0.818752384 0.766389432 1.091285352 0.912689417 0.748589309 0.653394789 1.014428803 0.668405256 1 12.39492785 -6.750712109 24.99104176 0.807642372 0.873274299 0.030523407 0.142515671 803.1433351 1871059.019 0.0474703 0.047011744 1.78E-07 6.750712109 0.065631927 SHNSWENSDDSR ddPTM_A459_MK2206_30min_R1 1 SHNSWENSDDSR 12 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 0 110.8 0.012261 0 749.59 748.43 655.78 502.48 530.62 553.66 620.16 777.27 395.98 386.16 FALSE TRUE 685.8334342 699.707071 611.2674807 541.1810967 509.4842818 585.0077507 578.7902579 770.4744103 437.143538 434.0004162 1.580259854 1.612226728 1.408449066 1.246959857 1.173925791 1.347942834 1.333616827 1.775284957 1.007242209 1 8.761552616 -11.75640475 0.055343208 1.21E-21 2.103619359 0.318469994 0.200171399 372.3383169 2.690136293 80.63831417 30.84781069 1.75E-12 11.75640475 2.103619359 SHNVAAGSY(ph)EAPLPPGSFHGDFAYGTYR ddPTM_A459_MK2206_30min_R1 2 SHNVAAGSYEAPLPPGSFHGDFAYGTYR 28 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 1 SHNVAAGS(0.005)Y(0.948)EAPLPPGS(0.046)FHGDFAYGT(0.001)YR;SHNVAAGS(0.083)Y(0.902)EAPLPPGS(0.012)FHGDFAYGT(0.002)YR 105.52 9.63E-10 22906000 4067.3 4279.6 4597 3748.78 4239.8 4131.1 4330.4 4365.2 3778.95 3926.5 TRUE FALSE 3721.354777 4000.997262 4284.968448 4037.511685 4070.919788 4364.999312 4041.526917 4327.035517 4171.785376 4412.944464 0.843281579 0.906650264 0.970999858 0.914924654 0.922495133 0.989135338 0.91583453 0.980532511 0.945351887 1 12.10752588 -3.517505088 0.870425257 0.954871869 5.88E-15 0.581146966 0.029389038 12.12643468 1.27849356 0.009670243 18.2074682 0.000303735 3.517505088 -0.954871869 SHNVAAGSY(ph)EAPLPPGSFHGDFAYGTYR ddPTM_A459_MK2206_30min_R2 2 SHNVAAGSYEAPLPPGSFHGDFAYGTYR 28 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 1 SHNVAAGS(0.013)Y(0.966)EAPLPPGS(0.021)FHGDFAYGTYR;SHNVAAGS(0.011)Y(0.764)EAPLPPGS(0.224)FHGDFAYGT(0.001)YR 135.86 1.73E-12 15678200 16098.1 25630.8 20893.7 33661.1 34683.9 35537.2 35024.5 21377.4 27627.9 28425.2 TRUE FALSE 17330.58291 24358.01174 21590.28553 30910.88045 33322.03581 36889.59305 30425.74108 24171.49958 30030.9248 27497.68805 0.630256001 0.885820353 0.785167302 1.124126523 1.211812271 1.341552533 1.106483608 0.879037522 1.092125445 1 14.7470227 -5.759454191 17.47336843 1.116847203 0.778950084 0.596877573 0.128085502 0.903494694 7928.162267 0.038566861 0.062418525 1.74E-06 5.759454191 -0.337897118 SHNVAAGSYEAPLPPGS(ph)FHGDFAYGTYR ddPTM_A459_MK2206_30min_R1 2 SHNVAAGSYEAPLPPGSFHGDFAYGTYR 28 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 1 SHNVAAGSY(0.001)EAPLPPGS(0.995)FHGDFAY(0.001)GT(0.001)Y(0.001)R;SHNVAAGSYEAPLPPGS(0.999)FHGDFAY(0.001)GTYR 186.4 1.59E-32 17640600 2055.16 2131.08 1951.18 1801.28 2029.23 2426 2258.77 2162.81 1840.53 1467.84 TRUE FALSE 1880.35785 1992.346305 1818.739338 1940.014898 1948.401472 2563.358023 2108.091575 2143.90078 2031.85968 1649.687101 1.13982697 1.207711634 1.102475334 1.175989614 1.181073351 1.553844982 1.277873588 1.299580253 1.231663677 1 10.6879767 -6.552204562 24.99993016 1.300069978 1.159078517 0.142600075 0.128779577 315.0566143 268580.2106 0.040763624 0.040764205 2.80E-07 6.552204562 -0.14099146 SHNVAAGSYEAPLPPGS(ph)FHGDFAYGTYR ddPTM_A459_MK2206_30min_R2 1 SHNVAAGSYEAPLPPGSFHGDFAYGTYR 28 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 1 SHNVAAGSYEAPLPPGS(0.995)FHGDFAY(0.001)GT(0.003)Y(0.001)R 122.59 2.52E-12 0 2687.6 8129 7380.8 9532.1 8080.6 8926.6 7116.9 6333.2 7753.4 8481.8 TRUE FALSE 2893.364722 7725.325681 7626.872188 8753.296938 7763.315042 9266.308018 6182.442481 7160.970985 8427.776717 8205.039561 0.352632635 0.941534239 0.92953509 1.06681959 0.946164243 1.129343491 0.753493318 0.872752768 1.027146384 1 13.00229457 -4.761011678 6.15697402 0.960639954 0.331822495 0.774834666 0.098751979 0.061025261 9.476277513 0.024956065 0.161615709 1.73E-05 4.761011678 -0.628817458 SHPAMS(ph)PGTPGPTMGR ddPTM_A459_MK2206_30min_R1 1 SHPAMSPGTPGPTMGR 16 0 A0A3F2YNW7;Q8NFD5;Q8NFD5-2;Q8NFD5-3;A0A1B0GUC6;A0A1B0GUG2;A0A1B0GU09;A0A6I8PTU7 A0A3F2YNW7 ARID1B AT-rich interactive domain-containing protein 1B 1 S(0.003)HPAMS(0.82)PGT(0.177)PGPTMGR 116.87 0.0018863 3048500 530.77 454.19 322.33 427.99 544.75 570.4 530.84 317.57 349.1 376.77 TRUE FALSE 485.6252243 424.6221484 300.4511377 460.953864 523.051454 602.6955551 495.4286322 314.793519 385.3901943 423.4471121 1.146837965 1.002774931 0.709536396 1.08857482 1.235222627 1.423307747 1.169989399 0.743406933 0.910125924 1 8.72603798 -7.751836775 24.99414257 0.870074808 1.107236482 0.247090687 0.180483525 299.6968964 780071.1146 0.097963047 0.055631379 1.77E-08 7.751836775 0.237161674 SHPGGPGS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SHPGGPGSPR 10 0 Q96PG8 Q96PG8 BBC3 Bcl-2-binding component 3 1 S(0.001)HPGGPGS(0.999)PR 83.204 0.02694 1083900 8963.9 9855.9 7193.8 10023 10147 9200.4 7680 10607 11115 10538 TRUE FALSE 9650.183076 9366.470338 7433.637702 9204.088838 9748.577795 9550.527669 6671.606775 11993.37132 12081.76261 10194.14592 0.946639684 0.918808737 0.729206523 0.90287984 0.956291765 0.936863936 0.654454706 1.176495943 1.185166732 1 13.31545329 -7.788251184 24.999995 1.135623731 0.868441729 0.556272887 0.104848861 163.368174 152326.2393 0.056879497 0.027335865 1.63E-08 7.788251184 -0.267182001 SHPLDLS(ph)PNVQSR ddPTM_A459_MK2206_30min_R1 3 SHPLDLSPNVQSR 13 0 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBM4 H0YBF7 ASAP1 "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1" 1 SHPLDLS(1)PNVQSR;SHPLDLS(0.998)PNVQS(0.002)R;SHPLDLS(1)PNVQSR 174.47 0.00012262 21294300 13614.6 14590.6 13874.7 12227.2 12863 11008.3 12243.2 12638.3 12421.2 11770.8 TRUE FALSE 12456.60678 13640.74929 12932.92402 13168.94106 12350.63947 11631.58043 11426.47847 12527.80468 13712.42819 13229.05557 0.94160968 1.031120416 0.977615065 0.995455873 0.933599485 0.87924496 0.863741059 0.946991613 1.03653871 1 13.69142245 -4.445145337 16.02391832 0.957714564 0.658200524 0.005683261 0.05558343 5994591.161 20910980.44 0.015233828 61624535.53 3.59E-05 4.445145337 -0.29951404 SHPLDLS(ph)PNVQSR ddPTM_A459_MK2206_30min_R2 2 SHPLDLSPNVQSR 13 0 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBM4 H0YBF7 ASAP1 "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1" 1 SHPLDLS(1)PNVQSR;SHPLDLS(0.999)PNVQS(0.001)R 170.47 0.00015016 43303000 128719 145318 123528 150890 131838 126098 146370 110696 115175 137084 TRUE FALSE 138573.8256 138101.7194 127646.3619 138561.8043 126661.3777 130896.7478 127151.4432 125164.3473 125192.7133 132610.9603 1.044965102 1.041405017 0.962562684 1.044874451 0.955135061 0.987073372 0.958830574 0.943846172 0.944060076 1 17.01684049 -5.230232231 0.537260062 0.957826192 1.081113654 0.481139664 0.028753492 2.235360263 0.693218992 0.017540447 0.162912959 5.89E-06 5.230232231 0.123287462 SHPLDPIDTVDFER ddPTM_A459_MK2206_30min_R1 1 SHPLDPIDTVDFER 14 0 A0A0U1RQL2;C9J165;A0A0U1RQT0;A0A1B0GVU9;P47897-2;P47897;A0A0U1RQM8;A0A0U1RQU2;A0A0U1RRI9;A0A0U1RQE9 A0A0U1RQL2 QARS Glutamine--tRNA ligase 0 101.36 0.011727 2599100 553.7 464.37 458.89 559.63 560.93 641.01 678.43 646.24 627.75 472.4 FALSE TRUE 506.6049074 434.1394286 427.7418253 602.7327996 538.5869703 677.3034322 633.1731726 640.5899918 693.0068589 530.9244784 0.954193916 0.817704676 0.805654745 1.135251479 1.014432357 1.275705792 1.192586137 1.206555768 1.305283307 1 9.052362849 -6.038875123 1.499697725 1.198444352 0.852714528 0.615954258 0.105630002 0.239912317 1.088376149 0.035570378 0.05977667 9.14E-07 6.038875123 -0.345729824 SHPLDPIDTVDFER ddPTM_A459_MK2206_30min_R2 1 SHPLDPIDTVDFER 14 0 A0A0U1RQL2;C9J165;A0A0U1RQT0;A0A1B0GVU9;P47897-2;P47897;A0A0U1RQM8;A0A0U1RQU2;A0A0U1RRI9;A0A0U1RQE9 A0A0U1RQL2 QARS Glutamine--tRNA ligase 0 93.228 0.020658 1836100 14932 31718 23516 22934 28749 30020 22023 15900 24211 17250 FALSE TRUE 16075.2054 30142.93024 24300.0117 21060.21884 27620.16981 31162.43214 19131.35365 17978.18459 26316.82902 16687.13391 0.963329322 1.806357545 1.456212423 1.262063273 1.655177573 1.867452631 1.14647331 1.07736803 1.57707304 1 14.02644857 -10.81522045 5.243523093 0.999915796 1.432518418 0.157877022 0.292763552 0.000289238 3.90E-05 0.284468241 0.068980324 1.53E-11 10.81522045 0.432602622 SHS(ph)AGEVGEDSR ddPTM_A459_MK2206_30min_R1 1 SHSAGEVGEDSR 12 0 A0A2R8Y6F3;Q9P2P5;A0A2R8YE75 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 S(0.091)HS(0.909)AGEVGEDSR 164.22 0.00050812 5249500 1106 870.88 841.39 722.31 1141.9 961.98 887.26 910.93 630.93 620.59 TRUE FALSE 1011.928892 814.1855537 784.278791 777.9424414 1096.415705 1016.446476 828.0725043 902.965835 696.5174313 697.4733744 1.450849494 1.167335677 1.124456961 1.115372242 1.571982165 1.457326564 1.187246044 1.294624093 0.99862942 1 9.445994334 -8.261797764 24.01437734 0.999314655 1.291043319 0.393663607 0.147247182 20.55029064 1376528.419 0.1256514 0.040144335 5.47E-09 8.261797764 0.291728663 SHS(ph)AGEVGEDSR ddPTM_A459_MK2206_30min_R2 1 SHSAGEVGEDSR 12 0 A0A2R8Y6F3;Q9P2P5;A0A2R8YE75 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 SHS(1)AGEVGEDSR 142.39 0.00091249 4928100 12021 15349 12276 12301 15389 13668 15826 12166 13095 13361 TRUE FALSE 12941.337 14586.79098 12685.27571 11295.96895 14784.75054 14188.14532 13748.02719 13756.13797 14233.97943 12925.03166 1.001261532 1.128569071 0.981450262 0.87396064 1.143885053 1.097726155 1.063674546 1.064302071 1.101272306 1 13.65788019 -6.310900493 24.99997212 1.081914133 1.004695228 0.261319751 0.066937564 579.5046042 292907.5154 0.021589203 0.02447992 4.89E-07 6.310900493 -0.077218906 SHS(ph)APSEVGFSDAR ddPTM_A459_MK2206_30min_R1 2 SHSAPSEVGFSDAR 14 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 S(0.068)HS(0.932)APS(0.001)EVGFSDAR;S(0.061)HS(0.938)APS(0.001)EVGFSDAR 112.91 0.0022898 16013900 6062.9 5765 6085.5 5755.2 6412.9 6296.7 5843.6 5690.5 4740.3 4378.7 TRUE FALSE 5547.218517 5389.697452 5672.433215 6198.466501 6157.460613 6653.213712 5453.784106 5640.748558 5233.071148 4921.166413 1.127216203 1.095207315 1.152660312 1.259552305 1.251219751 1.351958693 1.10822997 1.146221868 1.063380245 1 12.26478459 -8.213237475 1.425599509 1.005689151 1.199413635 0.443629414 0.073846314 0.418301314 1.601118676 0.076868128 0.024053885 6.12E-09 8.213237475 0.193724483 SHS(ph)APSEVGFSDAR ddPTM_A459_MK2206_30min_R2 3 SHSAPSEVGFSDAR 14 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 S(0.074)HS(0.924)APS(0.002)EVGFSDAR;S(0.21)HS(0.731)APS(0.059)EVGFSDAR;S(0.047)HS(0.941)APS(0.011)EVGFSDAR 94.781 0.012959 36717800 60505.7 97705 74546.6 101834 105480 105388 97001 82978.9 84559 77036.9 TRUE FALSE 65138.06291 92853.11178 77031.94644 93513.83645 101338.3252 109398.6142 84264.65218 93824.52714 91913.78897 74523.19226 0.874064314 1.245962619 1.033664073 1.254828646 1.359822656 1.467980784 1.130717158 1.258997693 1.233358183 1 16.18540185 -5.770385005 23.64731599 1.263943139 1.070703562 0.259896462 0.144926539 125.0485947 330561.2156 0.0397542 0.060049265 1.70E-06 5.770385005 -0.193239577 SHS(ph)DNDRPNCSWNTQYSSAYYTSR ddPTM_A459_MK2206_30min_R2 3 SHSDNDRPNCSWNTQYSSAYYTSR 24 1 O75494-6;O75494-3 O75494-6 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.45)HS(0.5)DNDRPNCS(0.039)WNT(0.005)QY(0.003)S(0.001)S(0.001)AYYTSR;S(0.381)HS(0.585)DNDRPNCS(0.028)WNT(0.003)QY(0.001)S(0.001)SAYYTSR;S(0.497)HS(0.501)DNDRPNCS(0.002)WNTQYSSAYYTSR 89.462 0.0016125 25509000 1428.8 1256.2 1412.1 2482.39 3763.96 0 1897.7 2263.4 1308.2 1212.8 TRUE FALSE 1538.190027 1193.818935 1459.178709 2279.570796 3616.168018 0 1648.52971 2559.234151 1421.984871 1173.226435 1.311076856 1.017552025 1.24373153 1.942993038 3.082242191 0 1.405124928 2.181364206 1.212029348 1 10.19626577 -8.51609925 23.87932007 0.999999694 1.519915351 0.049659691 0.758482295 841.3057533 2963311.688 0.746241448 0.192678714 3.05E-09 8.51609925 0.519915657 SHS(ph)DTSIASR ddPTM_A459_MK2206_30min_R1 1 SHSDTSIASR 10 0 E9PEM3;H0Y6E6;Q92622-3;Q92622-2;Q92622;H7C357;H7C3H3 E9PEM3 KIAA0226 Run domain Beclin-1 interacting and cysteine-rich containing protein 1 S(0.104)HS(0.895)DT(0.001)SIASR 114.72 0.0045448 1534000 133.03 129.42 124.88 194.68 277.06 113 201.96 229.21 110.07 133.26 TRUE FALSE 121.7150999 120.9947345 116.4034935 209.6742873 266.0241135 119.3979623 188.4876169 227.2060411 121.5121704 149.7692549 0.812684152 0.807874317 0.777218887 1.399982176 1.776226461 0.797212769 1.258520095 1.517040606 0.811329204 1 7.226597683 -5.751466135 24.95364312 1.251247244 0.800120474 0.308557295 0.288438417 233.4140568 584010.0026 0.078401161 0.133744019 1.77E-06 5.751466135 -0.45112677 SHS(ph)DTSIASR ddPTM_A459_MK2206_30min_R2 3 SHSDTSIASR 10 0 E9PEM3;H0Y6E6;Q92622-3;Q92622-2;Q92622;H7C357;H7C3H3 E9PEM3 KIAA0226 Run domain Beclin-1 interacting and cysteine-rich containing protein 1 S(0.03)HS(0.968)DT(0.002)SIASR;S(0.119)HS(0.881)DTSIASR;S(0.259)HS(0.741)DTSIASR 108.72 0.0069521 13415300 23783.9 28843.6 21970.7 28504.3 28407.5 25880.5 26739.1 24452.6 20190.3 24580.2 TRUE FALSE 25604.81367 27411.26877 22703.19217 26175.40751 27292.07881 26865.40056 23228.22405 27648.63878 21946.4158 23778.15009 1.076821097 1.152792318 0.954792197 1.100817659 1.147779735 1.129835604 0.976872632 1.162775013 0.922965652 1 14.53734886 -8.272602505 24.99590069 0.961482816 1.085678298 0.344576738 0.069641439 928.8662166 2079847.92 0.063036345 0.01688223 5.34E-09 8.272602505 0.124195482 SHS(ph)GPAGSFNKPAIR ddPTM_A459_MK2206_30min_R1 2 SHSGPAGSFNKPAIR 15 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 S(0.016)HS(0.984)GPAGSFNKPAIR;S(0.031)HS(0.969)GPAGSFNKPAIR 108.06 0.0080143 98222000 4969.2 4689.7 5399.6 4174.1 6058 4791.8 5246 5006.8 3878.7 4073.7 TRUE FALSE 4546.543446 4384.399678 5033.090196 4495.589905 5816.697032 5063.107575 4896.048912 4963.026075 4281.904745 4578.380711 0.993046173 0.957631083 1.099316661 0.981917012 1.270470369 1.105872992 1.069384401 1.084013408 0.935244362 1 12.16062172 -1.648291329 16.46817945 1.057202647 0.00525473 0 0.093987855 0 0 0.02196869 0 0.022475464 1.648291329 -1.051947918 SHS(ph)GPAGSFNKPAIR ddPTM_A459_MK2206_30min_R2 1 SHSGPAGSFNKPAIR 15 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 S(0.032)HS(0.968)GPAGSFNKPAIR 77.505 0.019111 83436000 22640 37556 38321 46553 48102 39154 47657 33913 31191 39435 TRUE FALSE 24373.33581 35691.02365 39598.60301 42749.47098 46213.27379 40644.03291 41399.57865 38345.54554 33903.9368 38148.23918 0.638911162 0.935587708 1.038019155 1.120614526 1.211413024 1.065423563 1.085229084 1.005172096 0.888741854 1 15.21932885 -4.736477524 1.958861052 1.062444964 0.478400203 0.70844247 0.079936138 0.509605499 1.922580284 0.023430466 0.56600454 1.83E-05 4.736477524 -0.584044761 SHS(ph)GSSSPSPSR ddPTM_A459_MK2206_30min_R2 1 SHSGSSSPSPSR 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.059)HS(0.911)GS(0.007)S(0.007)S(0.014)PS(0.002)PSR 94.402 0.018988 605720 0 0 546.26 880.34 874.76 881.11 686.45 2250 2632.8 554.8 TRUE FALSE 0 0 564.4720358 808.4134059 840.4125271 914.6412585 596.3182904 2544.082725 2861.796185 536.6969214 0 0 1.051751954 1.506275467 1.565897797 1.704204407 1.111089456 4.740259584 5.332238868 1 9.067963802 -7.75189296 24.82156865 4.027186894 1.02483742 0.50825664 1.202926075 126.067894 327790.4352 0.568958748 0.322917866 1.77E-08 7.75189296 -3.002349475 SHS(ph)LSGAR ddPTM_A459_MK2206_30min_R2 1 SHSLSGAR 8 0 A0A0J9YYJ3;Q9Y519 A0A0J9YYJ3 TMEM184B Transmembrane protein 184B 1 S(0.006)HS(0.558)LS(0.436)GAR 95.483 0.014454 4548200 5277.8 2796.1 3663.1 4324.1 7314.5 5616.3 7854.1 9217.9 7435.6 8149.1 TRUE FALSE 5681.872426 2657.24974 3785.225926 3970.807198 7027.295978 5830.032232 6822.847236 10422.71118 8082.335048 7883.195534 0.720757515 0.337077741 0.480163902 0.503705278 0.891427334 0.7395519 0.865492579 1.322142922 1.025261268 1 12.94456484 -6.843043136 0.914048965 1.116641925 0.483476316 0.698483159 0.154242059 0.303397723 0.542542222 0.09837156 0.083574155 1.44E-07 6.843043136 -0.63316561 SHS(ph)LSRPGPTEGDAEGEAEGPVGSTLGSYATLTR ddPTM_A459_MK2206_30min_R2 3 SHSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTR 34 1 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(0.21)HS(0.586)LS(0.179)RPGPT(0.025)EGDAEGEAEGPVGSTLGSYATLTR;S(0.139)HS(0.406)LS(0.406)RPGPT(0.049)EGDAEGEAEGPVGSTLGSYATLTR;S(0.045)HS(0.493)LS(0.433)RPGPT(0.03)EGDAEGEAEGPVGSTLGSYATLTR 90.583 4.82E-09 25590500 25422.8 38498.7 29863.8 46864 49783 51835 39728.6 33450.7 32014.7 38205.8 TRUE FALSE 27369.18911 36586.91054 30859.44419 43035.06129 47828.26928 53807.61725 34512.1871 37822.82134 34799.28074 36959.14787 0.740525437 0.989928411 0.834960922 1.164395387 1.29408474 1.455867365 0.933792825 1.023368327 0.941560689 1 15.17364387 -5.761486715 24.99999999 1.131096737 0.86861723 0.343798259 0.164027759 1.537931885 812818.1128 0.049308073 0.078810417 1.73E-06 5.761486715 -0.262479507 SHS(ph)PSASQSGSQLR ddPTM_A459_MK2206_30min_R1 6 SHSPSASQSGSQLR 14 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.147)HS(0.852)PS(0.001)ASQSGSQLR;S(0.017)HS(0.982)PSAS(0.001)QSGSQLR;S(0.031)HS(0.948)PS(0.013)AS(0.007)QSGSQLR;S(0.009)HS(0.975)PS(0.013)AS(0.001)QS(0.001)GS(0.001)QLR;S(0.375)HS(0.605)PS(0.02)ASQSGSQLR;S(0.03)HS(0.94)PS(0.031)ASQSGSQLR 186.29 8.29E-05 46451600 4448.35 4160.86 4287.14 3873.91 5181.27 4878.9 4773.16 4392.5 3621.22 3333.07 TRUE FALSE 4069.994473 3889.987258 3996.140881 4172.279219 4974.889044 5155.139102 4454.751206 4354.096836 3997.658778 3745.995875 1.086491979 1.038438746 1.066776637 1.113797067 1.328055132 1.376173192 1.189203447 1.162333591 1.067181842 1 11.8711336 -6.016702847 17.24688809 1.206291542 1.066175872 0.210768794 0.104403359 17.75377654 18334.55271 0.031970635 0.042775371 9.62E-07 6.016702847 -0.14011567 SHS(ph)PSASQSGSQLR ddPTM_A459_MK2206_30min_R2 1 SHSPSASQSGSQLR 14 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.146)HS(0.854)PSASQSGSQLR 158.89 0.00030234 15729000 3996.9 9422.5 7451.5 12539 9756.3 12330 13105 7510.7 9518.5 8785.3 TRUE FALSE 4302.905737 8954.592352 7699.929291 11514.52359 9373.218641 12799.22679 11384.29776 8492.374278 10346.40192 8498.63638 0.506305429 1.053650486 0.906019383 1.35486719 1.10290854 1.506032994 1.339544045 0.999263164 1.217419061 1 13.05301566 -4.578172493 1.098147628 1.220373662 5.14E-14 0.573227075 0.174484765 1.808858382 1.34993372 0.054434084 2.850910096 2.64E-05 4.578172493 -1.220373662 SHS(ph)PSIDGTPK ddPTM_A459_MK2206_30min_R2 1 SHSPSIDGTPK 11 0 Q9BWT3-2;Q9BWT3;A0A0C4DH56 Q9BWT3-2 PAPOLG Poly(A) polymerase gamma 1 S(0.061)HS(0.926)PS(0.014)IDGTPK 103.97 0.0084388 12897000 83987 106570 85250 101990 93549 79513 122930 81825 77186 85809 TRUE FALSE 90417.1093 101277.8888 88092.19245 93657.09075 89875.79621 82538.92293 106789.1433 92519.80845 83899.49876 83009.05936 1.089243873 1.220082357 1.061235884 1.128275534 1.08272274 0.994336324 1.286475767 1.114574833 1.010727015 1 16.34098118 -8.260217863 5.568584052 1.003192421 1.123754085 0.269323033 0.07704607 0.211440292 25.50395285 0.062704269 0.019509358 5.49E-09 8.260217863 0.120561665 SHS(ph)PSSPDPDTPSPVGDSR ddPTM_A459_MK2206_30min_R1 1 SHSPSSPDPDTPSPVGDSR 19 0 E9PNJ4;G0XQ39;Q13586;H0YDB2 E9PNJ4 STIM1 Stromal interaction molecule 1 1 S(0.002)HS(0.931)PS(0.067)SPDPDTPSPVGDSR 307.92 1.21E-116 4100700 1141.9 990.5 907.66 932.66 1064.5 1356.7 896.68 1025.9 900.87 957.46 TRUE FALSE 1044.775409 926.01827 846.0505681 1004.493635 1022.098711 1433.515182 836.8641133 1016.930664 994.5186603 1076.077373 0.970911047 0.860549894 0.786235813 0.933477146 0.949837564 1.332167386 0.777698829 0.945034892 0.92420739 1 10.0715661 -4.437201812 20.75089529 0.943633512 2.60669335 0.002576027 0.146242256 3535.96905 879669.0767 0.036248031 7505.057991 3.65E-05 4.437201812 1.663059839 SHS(ph)QASLAGPGPVDPSNR ddPTM_A459_MK2206_30min_R1 1 SHSQASLAGPGPVDPSNR 18 0 A6PVU7;Q9P2M7-2;Q9P2M7;A2A3M4 A6PVU7 CGN Cingulin 1 SHS(1)QASLAGPGPVDPSNR 207.81 7.92E-30 0 1257.2 725.16 1014.7 1003.4 1195.6 1306.3 1102 830.56 904.39 847.53 TRUE FALSE 1150.268538 677.9519522 945.8249911 1080.682042 1147.97672 1380.261577 1028.487591 823.2985015 998.4045769 952.5284149 1.207594986 0.711739347 0.992962495 1.134540477 1.20518895 1.449050291 1.079744787 0.864329598 1.048162513 1 9.89561832 -4.415826054 23.24918748 1.061832531 46.13735808 0.056344383 0.186124101 3797.607563 824419.1619 0.049236945 3637.010453 3.84E-05 4.415826054 45.07552555 SHS(ph)QASLAGPGPVDPSNR ddPTM_A459_MK2206_30min_R2 3 SHSQASLAGPGPVDPSNR 18 0 A6PVU7;Q9P2M7-2;Q9P2M7;A2A3M4 A6PVU7 CGN Cingulin 1 SHS(1)QASLAGPGPVDPSNR;S(0.314)HS(0.659)QAS(0.027)LAGPGPVDPSNR;S(0.002)HS(0.983)QAS(0.016)LAGPGPVDPSNR 166.3 1.48E-07 23969100 67261 79678 67916 73683 83975 74801 85664 62944 56005 67994 TRUE FALSE 72410.55387 75721.30638 70180.28554 67662.8632 80677.71956 77647.60447 74416.2139 71170.99692 60876.21367 65775.36135 1.100876565 1.1512108 1.066969213 1.028696184 1.226564445 1.180496813 1.131369138 1.082031257 0.925516978 1 16.00525965 -8.104242155 4.027966407 0.964755731 1.126535608 0.577497742 0.055123366 0.178081276 4.889347339 0.043986539 0.015359391 7.87E-09 8.104242155 0.161779877 SHS(ph)SLPPNNSYADFER ddPTM_A459_MK2206_30min_R2 1 SHSSLPPNNSYADFER 16 0 O43293 O43293 DAPK3 Death-associated protein kinase 3 1 S(0.027)HS(0.514)S(0.459)LPPNNSYADFER 198.87 8.95E-07 6435000 7259 13553 13123 12215 11950 12515 12803 6888 9740.8 9406.2 TRUE FALSE 7814.754621 12879.97773 13560.51427 11216.99543 11480.78296 12991.26709 11121.95072 7788.28525 10588.03718 9099.276464 0.858832529 1.415494713 1.490284895 1.232734874 1.26172482 1.427725286 1.22228957 0.855923576 1.163613087 1 13.15153612 -7.592912233 6.913624642 1.009707577 1.296226453 0.32412925 0.177000658 0.246389073 19.77420036 0.082578131 0.047323841 2.55E-08 7.592912233 0.286518875 SHS(ph)SSEAYEPR ddPTM_A459_MK2206_30min_R1 9 SHSSSEAYEPR 11 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 S(0.041)HS(0.713)S(0.063)S(0.183)EAYEPR;S(0.05)HS(0.317)S(0.317)S(0.317)EAYEPR;S(0.001)HS(0.928)S(0.068)S(0.003)EAYEPR;S(0.006)HS(0.434)S(0.434)S(0.126)EAYEPR;S(0.032)HS(0.909)S(0.046)S(0.013)EAYEPR;S(0.018)HS(0.942)S(0.018)S(0.022)EAYEPR;S(0.026)HS(0.474)S(0.474)S(0.026)EAYEPR;S(0.132)HS(0.794)S(0.035)S(0.038)EAYEPR;S(0.003)HS(0.493)S(0.493)S(0.01)EAYEPR 202 1.85E-05 244955400 11222.02 10819.29 10612.91 10372.8 13321.84 11237.82 12797.65 11274.11 8480.06 8842.53 TRUE FALSE 10267.52827 10114.95225 9892.535238 11171.71485 12791.2029 11874.09566 11943.94212 11175.54164 9361.592583 9938.009374 1.033157435 1.01780466 0.995424221 1.1241401 1.287099098 1.194816307 1.201844521 1.124525166 0.941998768 1 13.27874119 -5.819931203 5.965389125 1.143968639 1.01580966 0.203661555 0.094461538 0.271731299 19.40670767 0.027836017 0.042270763 1.51E-06 5.819931203 -0.128158979 SHS(ph)SSEAYEPR ddPTM_A459_MK2206_30min_R2 4 SHSSSEAYEPR 11 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 S(0.051)HS(0.394)S(0.394)S(0.162)EAYEPR;SHS(0.958)S(0.041)S(0.001)EAYEPR;S(0.254)HS(0.588)S(0.152)S(0.006)EAYEPR;S(0.214)HS(0.386)S(0.386)S(0.014)EAYEPR 170.4 0.00036539 255460000 22725.3 31624.8 29649.5 46964 40070.2 52781.4 43371.9 37225.8 48500 33641.6 TRUE FALSE 24465.16644 30054.35842 30637.99953 43126.89097 38496.84261 54790.03316 37677.11743 42091.33988 52718.44233 32543.87735 0.751759423 0.923502694 0.94143667 1.325192155 1.182921205 1.683574227 1.157732898 1.293372004 1.61991891 1 14.99009853 -5.660880689 1.707520009 1.350973417 0.813081772 0.519985999 0.198325866 0.285303774 1.665844693 0.058998576 0.141698794 2.18E-06 5.660880689 -0.537891644 SHS(ph)TEPNLSSFLNDPNPMK ddPTM_A459_MK2206_30min_R2 1 SHSTEPNLSSFLNDPNPMK 19 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(0.289)HS(0.356)T(0.356)EPNLSSFLNDPNPMK 74.308 0.0065879 4747900 21516 24516 27426 24660 24929 22680 32714 23044 22395 30391 TRUE FALSE 23163.2815 23298.57109 28340.36915 22645.19912 23950.1622 23543.10329 28418.6125 26055.92992 24342.87662 29399.34416 0.787884294 0.792486083 0.963979638 0.770262051 0.81464954 0.80080369 0.966641036 0.88627589 0.828007471 1 14.84349635 -7.247634431 24.85052394 0.910754093 0.824162416 0.342730011 0.066290342 977.9112568 1760357.11 0.025509012 0.019654899 5.65E-08 7.247634431 -0.086591677 SHS(ph)VPENMVEPPLSGR ddPTM_A459_MK2206_30min_R1 1 SHSVPENMVEPPLSGR 16 0 A1L390-3;A1L390;G3V311;A1L390-2 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(0.211)HS(0.789)VPENMVEPPLSGR 179.9 1.04E-06 7445100 703.36 801.12 676.63 755.36 956.26 768.88 928.38 534.01 568.38 659.05 TRUE FALSE 643.5355385 748.9669424 630.7022408 813.5379581 918.1701393 812.4133211 866.4494641 529.3412069 627.465135 740.6980896 0.868823003 1.011163594 0.851497053 1.098339485 1.239601063 1.096821137 1.169774131 0.714651778 0.847126709 1 9.532741806 -7.76120426 24.99996903 0.83566694 1.050210795 0.314251304 0.130517351 7.436314585 790997.6099 0.070092673 0.037175252 1.73E-08 7.76120426 0.214543855 SHS(ph)VPENMVEPPLSGR ddPTM_A459_MK2206_30min_R2 1 SHSVPENMVEPPLSGR 16 0 A1L390-3;A1L390;G3V311;A1L390-2 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(0.313)HS(0.687)VPENMVEPPLSGR 132.15 0.00064287 3702100 9137.1 10831 9968 17029 14528 13617 13049 9872.2 10482 14463 TRUE FALSE 9836.643401 10293.14829 10300.32814 15637.67623 13957.55772 14135.20448 11335.65063 11162.53044 11393.70541 13991.07349 0.703065666 0.735693962 0.736207136 1.117689521 0.997604489 1.010301639 0.810205924 0.797832306 0.81435534 1 13.77221904 -5.597210196 15.85275555 0.927493184 0.723522054 0.488335109 0.098559519 1.830257924 388.5567787 0.029919201 0.051822251 2.53E-06 5.597210196 -0.20397113 SHS(ph)WVNSAYAPGGSK ddPTM_A459_MK2206_30min_R1 1 SHSWVNSAYAPGGSK 15 0 K7ESB7;K7EKT0 K7ESB7 DOCK6 1 S(0.013)HS(0.977)WVNS(0.009)AY(0.002)APGGSK 97.129 0.0097266 8879500 2402.1 2365.7 2515.1 2385.6 2436.1 2395.1 2293.8 2355.8 2353.3 1759.4 TRUE FALSE 2197.788781 2211.6925 2344.382019 2569.339325 2339.064978 2530.708492 2140.784787 2335.203489 2597.933956 1977.367755 1.111471943 1.118503371 1.185607489 1.299373533 1.18291854 1.279837039 1.082643723 1.180965697 1.31383449 1 10.9493655 -11.7823376 2.557953874 0.105780828 1.193979908 0.370634692 0.076227439 5246783.614 7800515.6 31632945.51 0.019483038 1.65E-12 11.7823376 1.08819908 SHS(ph)WVNSAYAPGGSK ddPTM_A459_MK2206_30min_R2 2 SHSWVNSAYAPGGSK 15 0 K7ESB7;K7EKT0 K7ESB7 DOCK6 1 S(0.171)HS(0.829)WVNSAYAPGGSK;S(0.013)HS(0.987)WVNSAYAPGGSK 119.76 0.0012377 14919300 72170 116114 85998 116058 104588 87769 110971 75838 77905 86461 TRUE FALSE 77695.39069 110347.9476 88865.1304 106575.6901 100481.3496 91109.1108 96400.3744 85750.28699 84681.03608 83639.78465 0.928928631 1.31932367 1.062474405 1.274222436 1.201358301 1.089303508 1.152566028 1.025233235 1.012449236 1 16.35190173 -7.781211586 1.733482376 0.998430242 1.160025197 0.249214246 0.104374745 0.484359549 2.773855314 0.075123411 0.029382265 1.65E-08 7.781211586 0.161594955 SHSDASVGSHSSTESEHGS(ph)SSPR ddPTM_A459_MK2206_30min_R1 1 SHSDASVGSHSSTESEHGSSSPR 23 0 Q6XZF7;A0A1C7CYY6;A0A1B0GTX1;Q6XZF7-2 Q6XZF7 DNMBP Dynamin-binding protein 1 SHSDASVGSHSS(0.002)T(0.005)ES(0.075)EHGS(0.306)S(0.306)S(0.306)PR 67.655 0.0018252 1819300 59.027 0 125.13 139.24 128.58 128.52 171.69 135 203.95 0 TRUE FALSE 54.00644369 0 116.6365242 149.9642889 123.4583863 135.7966913 160.2368734 133.8197092 225.1513323 0 0 SHSESASPSALSS(ph)SPNNLS(ph)PTGWSQPK ddPTM_A459_MK2206_30min_R2 1 SHSESASPSALSSSPNNLSPTGWSQPK 27 0 H7C155;P04049;P04049-2 H7C155 RAF1 RAF proto-oncogene serine/threonine-protein kinase 2 SHSESASPSALS(0.037)S(0.699)S(0.268)PNNLS(0.964)PT(0.031)GWSQPK 110.85 3.90E-09 3453300 15966 25006 16719 25193 32859 26844 28340 20121 22305 23105 TRUE FALSE 17188.36924 23764.2384 17276.40312 23134.65131 31568.79056 27865.56723 24618.92396 22750.88379 24245.04858 22351.08574 0.769017194 1.063225236 0.772955879 1.035057159 1.412405237 1.246720967 1.101464342 1.017887187 1.08473695 1 14.44805729 -5.996456257 23.11994048 1.154689939 0.890569239 0.449291144 0.1355268 40.1232928 261753.6811 0.039636144 0.058389019 1.01E-06 5.996456257 -0.264120701 SHSESASPSALSS(ph)SPNNLSPTGWSQPK ddPTM_A459_MK2206_30min_R1 1 SHSESASPSALSSSPNNLSPTGWSQPK 27 0 H7C155;P04049;P04049-2 H7C155 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 SHSESASPS(0.001)ALS(0.027)S(0.481)S(0.481)PNNLS(0.01)PTGWSQPK 93.404 6.18E-06 4817700 1167.4 821.94 1045.2 845.38 1644 1894.7 1861.7 1701.2 1328 1047.1 TRUE FALSE 1068.1065 768.4315566 974.2547361 910.4913141 1578.515999 2001.976277 1737.50939 1686.326588 1466.050352 1176.822653 0.907618915 0.652971418 0.827868782 0.773686087 1.341337197 1.701170751 1.476441149 1.432948782 1.245769996 1 10.20068121 -6.289005745 5.007197738 1.414944051 0.780740591 0.707980732 0.179868581 0.096436564 6.743368569 0.054864211 0.064685169 5.14E-07 6.289005745 -0.63420346 SHSESASPSALSSSPNNLS(ph)PTGWSQPK ddPTM_A459_MK2206_30min_R1 1 SHSESASPSALSSSPNNLSPTGWSQPK 27 0 H7C155;P04049;P04049-2 H7C155 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 SHSESASPSALSSS(0.001)PNNLS(0.837)PT(0.157)GWS(0.006)QPK 150.62 3.84E-14 6943900 1672.1 782.66 1173.4 754.66 1458.6 1703.9 1223 1215.5 870.3 781.45 TRUE FALSE 1529.879114 731.7086917 1093.752877 812.784044 1400.500873 1800.373346 1141.415901 1204.873012 960.7707994 878.2619256 1.741939471 0.833132657 1.245360689 0.925446066 1.59462779 2.049927582 1.299630404 1.371883463 1.093945634 1 9.778507451 -8.350617154 3.086080872 1.002897063 1.372956942 0.136733994 0.340233959 0.568320328 9.916141279 0.341448053 0.093019325 4.46E-09 8.350617154 0.370059879 SHSESASPSALSSSPNNLS(ph)PTGWSQPK ddPTM_A459_MK2206_30min_R2 2 SHSESASPSALSSSPNNLSPTGWSQPK 27 0 H7C155;P04049;P04049-2 H7C155 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 SHSESASPSALSSSPNNLS(0.978)PT(0.021)GWS(0.001)QPK;SHSESASPSALSSSPNNLS(0.948)PT(0.052)GWSQPK 180.36 2.14E-26 20028500 51077 100347 64321 102914 105580 105388 95592 63085 66089 62575 TRUE FALSE 54987.49439 95363.9139 66465.43004 94505.59699 101434.3987 109398.6142 83040.65557 71330.4261 71837.30176 60533.18287 0.908385976 1.575398969 1.097999921 1.56121969 1.675682558 1.807250321 1.371820407 1.178368999 1.186742516 1 15.88543859 -7.749077655 3.558481449 1.12427267 1.454511194 0.236445239 0.254203674 0.354928313 9.464536037 0.148737109 0.072492614 1.78E-08 7.749077655 0.330238524 SHSGTSPDNTAPPPPPPRPQPS(ph)HSR ddPTM_A459_MK2206_30min_R2 1 SHSGTSPDNTAPPPPPPRPQPSHSR 25 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 SHSGTSPDNTAPPPPPPRPQPS(0.838)HS(0.162)R 109.37 9.40E-08 3263800 2986.1 3377.6 3334.8 4138.8 4129.7 4781.5 2981.3 3408.2 3097.8 3233.8 TRUE FALSE 3214.718112 3209.873295 3445.980568 3800.646801 3967.547228 4963.463333 2589.851729 3853.663442 3367.241044 3128.281371 1.027630744 1.026082029 1.101557104 1.214931251 1.268283366 1.586642231 0.827883244 1.231878781 1.076386886 1 11.61115457 -3.865499573 13.90473564 1.14836347 1.131873555 0 0.194806322 0 0 0.044793869 0 0.000136301 3.865499573 -0.016489915 SHSLS(ph)RPGPTEGDAEGEAEGPVGSTLGSYATLTR ddPTM_A459_MK2206_30min_R1 2 SHSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTR 34 1 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(0.037)HS(0.34)LS(0.482)RPGPT(0.136)EGDAEGEAEGPVGS(0.003)T(0.001)LGS(0.001)YATLTR;S(0.002)HS(0.069)LS(0.86)RPGPT(0.069)EGDAEGEAEGPVGSTLGSYATLTR 120.26 3.38E-19 25723000 1386.91 1385.16 1572.57 1104.57 1238.62 1368.92 1495.88 1313.42 1212.39 838.72 TRUE FALSE 1268.946022 1294.985832 1465.82833 1189.644173 1189.283143 1446.427067 1396.092575 1301.936907 1338.422279 942.6269656 1.346180481 1.373805206 1.55504604 1.262051921 1.261668917 1.534463919 1.481065814 1.381179358 1.419885414 1 9.880543143 -10.68298098 5.310637857 0.99999842 1.402803599 0.614313424 0.095484915 1.64E-05 2.59E-06 0.095826123 0.023240444 2.08E-11 10.68298098 0.40280518 SHSLS(ph)RPGPTEGDAEGEAEGPVGSTLGSYATLTR ddPTM_A459_MK2206_30min_R2 1 SHSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTR 34 1 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(0.014)HS(0.209)LS(0.774)RPGPT(0.003)EGDAEGEAEGPVGSTLGSYATLTR 107.13 2.93E-14 10122000 3130.9 6098.9 4343 6168.5 6216.6 5965.4 4249.8 3123.5 3886.3 5244.9 TRUE FALSE 3370.604111 5796.037495 4487.793452 5664.513818 5972.505048 6192.417477 3691.796155 3531.752175 4224.323349 5073.759343 0.664320848 1.142355619 0.884510508 1.116433287 1.177136053 1.220479148 0.727625397 0.696081926 0.832582522 1 12.30883938 -7.278894815 24.75954024 0.788745939 1.04255191 0.279508869 0.170908852 877.4526775 1244611.299 0.071188924 0.048118343 5.26E-08 7.278894815 0.253805971 SHSPSASQSGS(ph)QLR ddPTM_A459_MK2206_30min_R1 1 SHSPSASQSGSQLR 14 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.002)HS(0.014)PS(0.041)AS(0.023)QS(0.212)GS(0.708)QLR 83.856 0.026923 679570 264.22 284.71 382.96 199.78 149.56 292.14 261.35 251.19 172.86 208.3 TRUE FALSE 241.7467015 266.1753273 356.9657422 215.1670902 143.6027085 308.6807143 243.9158184 248.9938723 190.8294156 234.1057766 1.032638771 1.136987438 1.524805357 0.919102012 0.613409505 1.318552318 1.041904313 1.063595593 0.815141849 1 7.871016723 SHSS(ph)LPPNNSYADFER ddPTM_A459_MK2206_30min_R2 3 SHSSLPPNNSYADFER 16 0 O43293 O43293 DAPK3 Death-associated protein kinase 3 1 S(0.065)HS(0.214)S(0.721)LPPNNSYADFER;S(0.037)HS(0.132)S(0.831)LPPNNSYADFER;S(0.003)HS(0.195)S(0.802)LPPNNSYADFER 93.812 0.0064228 16619000 56541 65041 63367 71669 68585 80403 83138 63041 60970 66157 TRUE FALSE 60869.82243 61811.15852 65479.62415 65813.41344 65892.00829 83462.79251 72221.88073 71280.67515 66273.06039 63998.30251 0.951116202 0.965824969 1.023146265 1.028361861 1.029589938 1.304140723 1.128496818 1.113790091 1.035544035 1 15.96574602 -6.542265261 24.99381665 1.12899627 0.997016881 0.360028682 0.078118804 251.7243698 324530.0606 0.02612291 0.026126049 2.87E-07 6.542265261 -0.131979389 SHSS(ph)PSQIPK ddPTM_A459_MK2206_30min_R1 2 SHSSPSQIPK 10 0 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 SHS(0.003)S(0.93)PS(0.067)QIPK;SHS(0.307)S(0.626)PS(0.067)QIPK 185.99 0.00019075 31345000 15677.8 15702.2 15855.7 13685.6 15755.5 13927.6 16221.7 16704.6 14250.3 13502.2 TRUE FALSE 14344.32078 14679.98393 14779.45926 14739.66728 15127.92507 14716.16868 15139.57999 16558.55344 15731.66968 15174.95447 0.945262855 0.967382403 0.973937634 0.97131542 0.996900854 0.969766908 0.99766889 1.091176483 1.03668645 1 13.88940457 -7.565786383 6.786043706 1.047903842 0.972854685 0.642579057 0.023839942 0.113899059 13.40003725 0.010915004 0.006290579 2.72E-08 7.565786383 -0.075049157 SHSS(ph)PSQIPK ddPTM_A459_MK2206_30min_R2 2 SHSSPSQIPK 10 0 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 SHS(0.021)S(0.906)PS(0.073)QIPK;SHS(0.023)S(0.953)PS(0.025)QIPK 177.04 7.66E-05 27610000 179624 247450 197738 229750 230130 215820 263160 200731 203780 266770 TRUE FALSE 193376.1515 235161.9928 204330.4862 210978.6901 221093.9399 224033.1813 228606.7759 226967.2309 221504.4161 258065.3167 0.749330263 0.911249895 0.791778178 0.817539888 0.856736359 0.868125884 0.885848508 0.879495291 0.858326949 1 17.97737673 -14.52287875 0.115512907 1.496704964 0.769188235 0.619237757 0.040001984 105.8816004 0.799141402 12.29242523 0.416520907 3.00E-15 14.52287875 -0.727516729 SHSS(ph)SEAYEPR ddPTM_A459_MK2206_30min_R2 1 SHSSSEAYEPR 11 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 S(0.005)HS(0.191)S(0.612)S(0.191)EAYEPR 91.307 0.017597 3305200 18698 13133 21572 17294 14515 18039 11242 16710 24543 19425 TRUE FALSE 20129.53326 12480.83432 22291.19971 15881.02488 13945.06817 18725.48679 9765.911896 18894.05437 26677.70578 18791.16384 1.071223338 0.664186339 1.186259664 0.845132585 0.742107742 0.996504897 0.519707666 1.005475474 1.419694171 1 14.1977668 -8.005840375 24.78718166 1.210759739 0.858383609 0.31244181 0.206413142 239.6658956 1017161.215 0.111871474 0.050938402 9.87E-09 8.005840375 -0.35237613 SHSSS(ph)EAYEPR ddPTM_A459_MK2206_30min_R1 1 SHSSSEAYEPR 11 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 S(0.009)HS(0.182)S(0.182)S(0.628)EAYEPR 184.98 2.21E-05 130980000 2423 1153.4 1448 1027.5 3306.2 2882 2724.1 2183.1 1155.1 1212.5 TRUE FALSE 2216.911126 1078.31345 1349.713794 1106.638228 3174.507053 3045.176349 2542.380259 2164.013387 1275.176779 1362.713654 1.62683563 0.791298632 0.990460315 0.8120842 2.329548136 2.234641402 1.865674606 1.588017689 0.935762825 1 10.41226673 -6.239768764 24.76858626 1.727463448 1.031699633 0.270617873 0.477094056 899.8620973 1028503.526 0.145784315 0.188030681 5.76E-07 6.239768764 -0.695763816 SHSSSAS(ph)SAESQDSK ddPTM_A459_MK2206_30min_R1 1 SHSSSASSAESQDSK 15 0 Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 SHSSS(0.002)AS(0.964)S(0.033)AES(0.001)QDSK 127.57 0.0012345 0 320.45 59.583 289.09 238.07 279.35 221.59 295.34 134.84 0 163.67 TRUE FALSE 293.1940448 55.70413587 269.4673763 256.4061927 268.222898 234.1362343 275.6384075 133.6611081 0 183.9466752 1.593907823 0.302827631 1.464921157 1.393915885 1.458155727 1.272848416 1.498469092 0.726629649 0 1 7.52314379 -7.931191731 5.358053694 0.455790696 1.260129637 0.388635884 0.411296415 0.187678685 9.930462369 0.230635033 0.106516415 1.17E-08 7.931191731 0.804338941 SHST(ph)EPNLSSFLNDPNPMK ddPTM_A459_MK2206_30min_R2 1 SHSTEPNLSSFLNDPNPMK 19 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(0.312)HS(0.312)T(0.37)EPNLS(0.003)S(0.003)FLNDPNPMK 74.561 0.013299 2084000 12483 18871 16236 21354 19079 16488 22391 14301 13658 19507 TRUE FALSE 13438.70808 17933.89358 16777.30014 19609.30989 18329.8626 17115.46239 19451.0348 16170.1898 14845.94815 18870.48819 0.712154765 0.95036723 0.889076105 1.039152231 0.971350736 0.90699627 1.030764791 0.856903629 0.786728356 1 14.20384413 -4.75939294 24.99667679 0.937133192 0.712154478 0.444580393 0.075331997 52.32746837 639004.741 0.019120588 0.12174535 1.74E-05 4.75939294 -0.224978714 SHSTYS(ph)STPGR ddPTM_A459_MK2206_30min_R2 1 SHSTYSSTPGR 11 0 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-2;F5GXF5;A0A0A0MR81 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 SHSTYS(0.493)S(0.253)T(0.253)PGR 88.163 0.020528 638490 2822.2 3788.7 2520.9 3453.5 3771.5 4780.2 3267.6 4890.8 5071.9 3069.5 TRUE FALSE 3038.269802 3600.558667 2604.945548 3171.338003 3623.41196 4962.113861 2838.560195 5530.044353 5513.044694 2969.342466 1.023212996 1.21257777 0.877280266 1.068027026 1.220274186 1.671115379 0.955955814 1.862380111 1.856655053 1 11.53592778 -6.549069683 4.287695389 1.490983257 1.052468186 0.308633983 0.298520889 0.255264804 10.92869242 0.100022606 0.103444324 2.82E-07 6.549069683 -0.438515071 SHT(ph)SEGAHLDITPNSGAAGNSAGPK ddPTM_A459_MK2206_30min_R1 1 SHTSEGAHLDITPNSGAAGNSAGPK 25 0 E5RJY1;E7ESM1;Q92597-3;Q92597-2;Q92597 E5RJY1 NDRG1 Protein NDRG1 1 S(0.151)HT(0.659)S(0.19)EGAHLDITPNSGAAGNSAGPK 110.44 1.49E-07 12946000 2278.5 1741.1 2516 2596.1 10354 11244 10919 9031.2 5369 5072.8 TRUE FALSE 2084.70161 1627.754074 2345.22093 2796.052072 9941.578255 11880.62556 10190.61343 8952.241171 5927.126763 5701.256762 0.365656503 0.28550794 0.411351572 0.49042732 1.743752066 2.083860815 1.787432817 1.570222417 1.039617581 1 12.47706426 -6.225555032 6.013619982 1.606446955 0.373565355 0.760670068 0.314517353 0.094628601 10.24826757 0.097892586 0.124780657 5.95E-07 6.225555032 -1.232881599 SHTEEDCTEELFDFLHAR ddPTM_A459_MK2206_30min_R1 2 SHTEEDCTEELFDFLHAR 18 0 P07919 P07919 UQCRH "Cytochrome b-c1 complex subunit 6, mitochondrial" 0 ; 246.66 5.30E-33 7446500 2009.58 1526.63 1846.76 1844.52 1974.88 1596.06 2653.58 2256.54 1640.22 2474.8 FALSE TRUE 1838.654668 1427.24611 1721.407077 1986.58525 1896.216348 1686.427538 2476.56452 2236.811309 1810.726739 2781.396908 0.661054402 0.513140036 0.618900191 0.714240116 0.681749643 0.606323942 0.890403133 0.804204284 0.651013429 1 11.44159392 -14.52287865 0.056159363 2.25338143 0.124720707 0.606457538 0.086435982 300.9910313 1.23626251 52.98933567 9.84027778 3.00E-15 14.52287865 -2.128660723 SHTPS(ph)PTSPK ddPTM_A459_MK2206_30min_R1 3 SHTPSPTSPK 10 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 SHT(0.002)PS(0.959)PT(0.036)S(0.003)PK;SHTPS(0.99)PT(0.009)SPK;SHTPS(0.995)PT(0.004)S(0.001)PK 153.54 0.00059179 23093400 24471.7 25109.8 24164.6 20666.8 24698.9 20499.1 23866.5 24253.3 18597.2 21000.7 TRUE FALSE 22390.25341 23475.14746 22524.37428 22258.56052 23715.09051 21659.74133 22274.40933 24041.25596 20530.44549 23602.42526 0.948642064 0.994607427 0.954324567 0.94306243 1.004773461 0.917691343 0.943733921 1.01859261 0.869844741 1 14.52664749 SHTPS(ph)PTSPK ddPTM_A459_MK2206_30min_R2 2 SHTPSPTSPK 10 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 SHTPS(0.537)PT(0.358)S(0.105)PK;SHTPS(0.99)PT(0.009)S(0.001)PK 104.94 0.0084784 23279000 119859 162026 138588 170979 164775 131640 181787 128074 123950 161333 TRUE FALSE 129035.4972 153980.0244 143208.4547 157009.4688 158305.1056 136649.6524 157918.1485 144813.7115 134730.9469 156068.7174 0.826786427 0.986616838 0.917598716 1.006027802 1.014329509 0.875573624 1.011850108 0.927884293 0.863279645 1 17.25182187 -4.752687029 24.89914037 0.955085802 0.82678617 0.339084701 0.054068797 376.8188026 1071909.285 0.013150224 0.152269665 1.77E-05 4.752687029 -0.128299632 SHTPSPTS(ph)PK ddPTM_A459_MK2206_30min_R1 5 SHTPSPTSPK 10 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 SHTPSPT(0.042)S(0.958)PK;SHTPSPT(0.054)S(0.946)PK;SHTPSPT(0.066)S(0.934)PK;SHTPSPT(0.009)S(0.991)PK;SHTPS(0.001)PT(0.165)S(0.834)PK 160.91 0.00033565 212302800 45523.1 50548.6 48955.6 43081.1 34454.4 30390.7 37591.3 38191.9 33121.3 40310.1 TRUE FALSE 41651.12129 47257.87695 45632.63027 46399.21379 33082.00829 32111.39517 35083.65297 37857.99224 36564.37766 45304.01951 0.919369225 1.043127684 1.007253457 1.024174329 0.730222365 0.708797928 0.774404862 0.835643121 0.807089041 1 15.46735144 -6.254260143 24.93980467 0.794365892 1.002296813 0.564899131 0.080643124 364.444714 1266036.348 0.023423653 0.029601816 5.57E-07 6.254260143 0.20793092 SHTPSPTS(ph)PK ddPTM_A459_MK2206_30min_R2 3 SHTPSPTSPK 10 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 SHTPS(0.001)PT(0.369)S(0.63)PK;SHTPSPT(0.012)S(0.988)PK;SHTPSPT(0.278)S(0.722)PK 141.73 0.00084477 274423000 297914 335342 285601 316126 318837 208322 366228 263005 197022 350375 TRUE FALSE 320722.5249 318689.4039 295122.7948 290297.4946 306317.8574 216249.8397 318141.8237 297380.6565 214158.6174 338942.2924 0.946245222 0.940246794 0.870716937 0.85648059 0.903746343 0.63801374 0.938631238 0.87737843 0.631843893 1 18.37068014 -5.477244965 1.087736929 0.821988395 0.961365241 0.128186471 0.111786392 1.431796385 2.789524818 0.038323041 0.176270777 3.33E-06 5.477244965 0.139376846 SHVEDGDIAGAPAS(ph)SPEAPPAEQDPVQLK ddPTM_A459_MK2206_30min_R1 1 SHVEDGDIAGAPASSPEAPPAEQDPVQLK 29 0 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5;A0A087WU26 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 SHVEDGDIAGAPAS(0.5)S(0.5)PEAPPAEQDPVQLK 189.84 3.43E-34 11989000 1848.4 1839.1 1353.9 1705.8 1899.1 1510.5 1566.7 1170.2 1287.5 1362.4 TRUE FALSE 1691.183874 1719.374256 1262.00104 1837.181012 1823.454826 1596.023205 1462.188302 1159.969065 1421.340232 1531.184398 1.104493931 1.122904765 0.824199255 1.199843085 1.190878661 1.042345525 0.954939395 0.757563274 0.928261962 1 10.58043232 -7.33520613 3.177671457 0.879871768 1.083195454 0.356774409 0.113272764 0.276490678 5.466218745 0.05301174 0.034427558 4.62E-08 7.33520613 0.203323686 SHVEDGDIAGAPAS(ph)SPEAPPAEQDPVQLK ddPTM_A459_MK2206_30min_R2 3 SHVEDGDIAGAPASSPEAPPAEQDPVQLK 29 0 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5;A0A087WU26 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 SHVEDGDIAGAPAS(0.5)S(0.5)PEAPPAEQDPVQLK;SHVEDGDIAGAPAS(0.5)S(0.5)PEAPPAEQDPVQLK;SHVEDGDIAGAPAS(0.5)S(0.5)PEAPPAEQDPVQLK 136.42 4.75E-14 73534100 159930 202352 147164 212335 169924 172656 229050 164611 125153 188905 TRUE FALSE 172174.3638 192303.4939 152070.3743 194986.5513 163251.93 179226.5451 198975.4599 186126.2229 136038.5817 182741.0453 0.942176748 1.052327864 0.832163207 1.067010156 0.893351188 0.980767866 1.088838359 1.018524451 0.744433641 1 17.47944119 -8.219563464 24.99769181 0.872216219 0.984664614 0.183762319 0.094567485 674.2854519 402513.6598 0.060410994 0.022832763 6.03E-09 8.219563464 0.112448395 SHVEDGDIAGAPASS(ph)PEAPPAEQDPVQLK ddPTM_A459_MK2206_30min_R1 3 SHVEDGDIAGAPASSPEAPPAEQDPVQLK 29 0 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5;A0A087WU26 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 SHVEDGDIAGAPAS(0.159)S(0.841)PEAPPAEQDPVQLK;SHVEDGDIAGAPAS(0.16)S(0.84)PEAPPAEQDPVQLK;SHVEDGDIAGAPAS(0.147)S(0.853)PEAPPAEQDPVQLK 181.22 3.05E-28 75803000 7709.4 7114.8 6761.3 5741.6 7667.3 6723.3 5956.5 6111.4 6320.1 4613.4 TRUE FALSE 7053.675046 6651.625227 6302.361794 6183.819027 7361.895205 7103.967436 5559.152753 6057.968674 6977.097012 5184.942821 1.360415204 1.2828734 1.215512304 1.192649416 1.419860442 1.370114904 1.072172432 1.168377142 1.345645893 1 12.34011236 -14.20836719 0.191476344 9.14E-10 1.312994908 0.393620407 0.101661869 135.4220806 1.476132926 51.83279416 0.289938006 6.19E-15 14.20836719 1.312994907 SHVEDGDIAGAPASS(ph)PEAPPAEQDPVQLK ddPTM_A459_MK2206_30min_R2 1 SHVEDGDIAGAPASSPEAPPAEQDPVQLK 29 0 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5;A0A087WU26 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 SHVEDGDIAGAPAS(0.07)S(0.93)PEAPPAEQDPVQLK 154.25 1.31E-16 52471000 74865 76001 57457 91214 64637 62322 93745 70271 49592 88739 TRUE FALSE 80596.72196 72226.90086 59372.5877 83761.52442 62099.02661 64693.70738 81436.16889 79455.66098 53905.42252 85843.4537 0.938880235 0.841379252 0.691637919 0.975747373 0.723398511 0.753624238 0.948659046 0.925587888 0.6279503 1 16.3894205 -7.251117291 24.6065308 0.869348304 0.818462083 0.043591039 0.124050691 2390.746829 5699243.949 0.046968435 0.035975338 5.61E-08 7.251117291 -0.050886221 SHVSSEPYEPIS(ph)PPQVPVVHEK ddPTM_A459_MK2206_30min_R1 2 SHVSSEPYEPISPPQVPVVHEK 22 0 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KS29;J3QKP0 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 SHVSSEPYEPIS(1)PPQVPVVHEK;S(0.009)HVS(0.026)S(0.026)EPY(0.087)EPIS(0.853)PPQVPVVHEK 103.2 4.68E-05 48191000 4743 2695.2 3481.6 2545 6084.5 6033.6 4892.2 3859.1 3014.6 3209.5 TRUE FALSE 4339.582944 2519.74199 3245.278692 2741.016341 5842.141481 6375.217218 4565.850264 3825.360296 3327.978458 3607.11709 1.203061291 0.698547324 0.899687648 0.759891146 1.619615148 1.767399576 1.265789313 1.060503499 0.92261448 1 11.81663054 -6.243323971 24.96042072 1.300072939 0.877271211 0.311528515 0.276396643 1009.867789 1391452.05 0.088449732 0.113955895 5.71E-07 6.243323971 -0.422801728 SHVSSEPYEPIS(ph)PPQVPVVHEK ddPTM_A459_MK2206_30min_R2 2 SHVSSEPYEPISPPQVPVVHEK 22 0 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KS29;J3QKP0 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 SHVSSEPYEPIS(1)PPQVPVVHEK;SHVSSEPYEPIS(1)PPQVPVVHEK 177.18 3.00E-16 18735700 28866.4 68577 45113 89608 89446 100224 85494 63747 65736 58841 TRUE FALSE 31076.43378 65171.5659 46617.0449 82286.73976 85933.90061 104038.0946 74268.5351 72078.95178 71453.59846 56921.02299 0.54595705 1.1449472 0.818977637 1.445630023 1.509704079 1.827762206 1.304764588 1.266297547 1.255311214 1 15.79667397 -5.761991796 24.99981742 1.405705768 0.867459195 0.501324241 0.242918605 12.04091502 544964.2327 0.06801722 0.108213161 1.73E-06 5.761991796 -0.538246573 SHVTEEEEEEEEEES(ph)DS ddPTM_A459_MK2206_30min_R1 2 SHVTEEEEEEEEEESDS 17 0 O75971-2;O75971 O75971-2 SNAPC5 snRNA-activating protein complex subunit 5 1 SHVTEEEEEEEEEES(0.613)DS(0.387);SHVTEEEEEEEEEES(0.617)DS(0.383) 142.39 0.00030207 0 463.57 444.12 459.03 313.5 359.84 540.93 399.27 246.72 486.52 208.84 TRUE FALSE 424.1409372 415.2077073 427.8723225 337.6458243 345.5068108 571.5569891 372.6354268 244.5629531 537.095495 234.7126759 1.80706447 1.769004191 1.822962143 1.438549593 1.472041548 2.435134732 1.587623785 1.041967385 2.288310561 1 7.874751948 -10.92955376 2.921473855 0.986670443 1.722213489 0.249835689 0.383687682 28415452.35 33856797.86 3167613.418 0.09807626 1.18E-11 10.92955376 0.735543047 SHWDDST(ph)SDSELEK ddPTM_A459_MK2206_30min_R2 1 SHWDDSTSDSELEK 14 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 SHWDDST(0.605)S(0.393)DS(0.001)ELEK 99.451 0.013128 9545300 40659 52871 40638 51004 48574 40523 52692 42640 35980 58813 TRUE FALSE 43771.8843 50245.50302 41992.85064 46836.81005 46666.7407 42065.13116 45773.47711 48213.19441 39109.47536 56893.93663 0.769359389 0.883143372 0.738090087 0.823230257 0.820241021 0.73936053 0.804540516 0.847422366 0.687410253 1 15.79598729 -10.71478668 4.927646532 1.000021477 0.793953574 0.563740471 0.055255273 1.22E-05 2.00E-06 0.05015875 0.012164017 1.93E-11 10.71478668 -0.206067903 SHWDDSTS(ph)DSELEK ddPTM_A459_MK2206_30min_R1 1 SHWDDSTSDSELEK 14 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 SHWDDST(0.013)S(0.987)DSELEK 156 0.0002144 6695600 3543.1 4257.1 3826.2 3277.5 3196.2 2706.2 3377.5 3178.5 3310.1 2778.9 TRUE FALSE 3241.740739 3979.962016 3566.488204 3529.933618 3068.888586 2859.422705 3152.193138 3150.71071 3654.19674 3123.171112 1.037964499 1.274333642 1.141944542 1.130240224 0.98261942 0.915551087 1.009292487 1.008817832 1.170027709 1 11.6087959 -6.150409998 4.249029673 1.009878959 1.159779485 0.393400607 0.079930183 0.228818028 6.962312405 0.024360464 0.032033557 7.07E-07 6.150409998 0.149900526 SIDAVIATASAPPSSS(ph)PGR ddPTM_A459_MK2206_30min_R1 2 SIDAVIATASAPPSSSPGR 19 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 SIDAVIATASAPPS(0.063)S(0.214)S(0.722)PGR;SIDAVIATAS(0.003)APPS(0.184)S(0.184)S(0.629)PGR 252.79 6.42E-38 36194000 7964.9 8676.6 8632.2 7638.7 9175.5 8416.4 9355.4 8433.1 7309.7 6554.1 TRUE FALSE 7287.44343 8111.751763 8046.270315 8227.033998 8810.020406 8892.929295 8731.318336 8359.370296 8069.569473 7366.071389 0.989325659 1.10123176 1.092342158 1.116882197 1.196027019 1.207282529 1.185342617 1.134847852 1.095505195 1 12.84667966 -4.067482755 0.933582656 1.145193108 0.588145564 0.327515378 0.058236142 7.254527909 1.920661021 0.019306427 5.638600603 8.56E-05 4.067482755 -0.557047544 SIDAVIATASAPPSSS(ph)PGR ddPTM_A459_MK2206_30min_R2 2 SIDAVIATASAPPSSSPGR 19 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 SIDAVIATASAPPSS(0.005)S(0.995)PGR;SIDAVIATASAPPS(0.001)S(0.026)S(0.974)PGR 300.28 3.07E-100 16082200 80833 89463 86874 93781 99228 94589 95901 67065 89593 87526 TRUE FALSE 87021.63663 85020.39751 89770.3358 86118.79231 95331.81014 98188.65068 83309.0835 75830.62577 97385.63719 84670.03379 1.027773732 1.00413799 1.060237392 1.017110641 1.125921485 1.159662354 0.983926423 0.895601695 1.15017832 1 16.36956384 SIEAVHEDIR ddPTM_A459_MK2206_30min_R1 4 SIEAVHEDIR 10 0 H7C312;H7BZ20;P23919-2;P23919 H7C312 DTYMK Thymidylate kinase 0 ;;; 140.78 0.00194 20378000 23798.8 22840.3 23010.8 20540.4 25504.3 24656.6 24599.3 22033.6 21249.4 18797.8 FALSE TRUE 21774.58709 21353.39232 21448.89101 22122.42517 24488.40972 26052.63538 22958.32558 21840.96256 23458.35117 21126.61338 1.030670969 1.010734278 1.015254581 1.04713542 1.159126136 1.233166666 1.086701648 1.033812763 1.110369691 1 14.3667739 -6.061334186 5.661084097 1.111008789 1.019807699 0.289811118 0.060295516 0.272230525 17.85397266 0.019040724 0.025164857 8.68E-07 6.061334186 -0.091201089 SIEAVHEDIR ddPTM_A459_MK2206_30min_R2 3 SIEAVHEDIR 10 0 H7C312;H7BZ20;P23919-2;P23919 H7C312 DTYMK Thymidylate kinase 0 ;; 139.15 0.0021899 6640300 75949 88119 80740 102892 95951 104546 101072 78639 88860 83060 FALSE TRUE 81763.71383 83743.1386 83431.8313 94485.39446 92183.48162 108524.5713 87801.12499 88917.38731 96588.88218 80349.759 1.017597499 1.042232605 1.038358202 1.175926296 1.147277637 1.350652107 1.092736631 1.106629172 1.202105437 1 16.29400608 -5.756544803 23.55445042 1.1634699 1.03367966 0.293429042 0.085004345 69.4256602 334089.4126 0.023070683 0.038317773 1.75E-06 5.756544803 -0.12979024 SIFAS(ph)PESVTGK ddPTM_A459_MK2206_30min_R1 2 SIFASPESVTGK 12 0 O75940 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 1 S(0.007)IFAS(0.992)PES(0.001)VTGK;S(0.01)IFAS(0.873)PES(0.109)VT(0.007)GK 195.72 0.00016892 72779000 14619.5 12835.1 12822.8 10247.2 12163.8 10101.9 11720.5 11175.1 10099.8 9931.1 TRUE FALSE 13376.03475 11999.53266 11952.42406 11036.44112 11679.29009 10673.86085 10938.64683 11077.39728 11149.71035 11161.43964 1.198414827 1.075088254 1.070867598 0.98880086 1.046396384 0.956315779 0.980039061 0.992470293 0.998949124 1 13.4462355 -1.522878745 0.569703845 0.987065682 11.73348669 0.867204079 0.024506678 46.59526708 0.400337816 0.011219646 617.2133523 0.03 1.522878745 10.74642101 SIGAS(ph)PNPFSVHTATAVPSGK ddPTM_A459_MK2206_30min_R1 1 SIGASPNPFSVHTATAVPSGK 21 0 A0A087WU64;A6NMQ1;P09884 A0A087WU64 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit 1 S(0.412)IGAS(0.588)PNPFSVHTATAVPSGK 107.65 8.61E-05 11718000 6118.2 2161.2 3834.1 2455.5 6242.8 5564.7 5527.3 4644.4 2702.8 2553.1 TRUE FALSE 5597.814962 2020.505487 3573.851974 2644.623035 5994.136057 5879.768505 5158.583902 4603.7945 2983.765732 2869.397303 1.950867855 0.704156753 1.245506145 0.92166499 2.088987834 2.049130143 1.797793529 1.604446514 1.039857997 1 11.48653203 -6.248077906 24.98266775 1.659600928 1.172589302 0.140716906 0.455063365 1279.513563 2392374.86 0.133837582 0.171755447 5.65E-07 6.248077906 -0.487011626 SIGAS(ph)PNPFSVHTATAVPSGK ddPTM_A459_MK2206_30min_R2 1 SIGASPNPFSVHTATAVPSGK 21 0 A0A087WU64;A6NMQ1;P09884 A0A087WU64 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit 1 S(0.104)IGAS(0.896)PNPFSVHTATAVPSGK 138.99 1.62E-05 6163600 21564 47056 32621 64149 66841 72849 65092 37002 55454 40998 TRUE FALSE 23214.95642 44719.26747 33708.56786 58907.8215 64216.48649 75621.31974 56545.34221 41838.28845 60277.28868 39660.23862 0.585345858 1.127559214 0.849933562 1.485311827 1.619165409 1.906728814 1.425743873 1.054917719 1.519841806 1 15.27540574 -5.761825733 24.99937468 1.460070223 0.881607403 0.476754993 0.27482411 9.050951472 585724.5993 0.078612807 0.125231047 1.73E-06 5.761825733 -0.578462819 SIGS(ph)PESTPK ddPTM_A459_MK2206_30min_R1 1 SIGSPESTPK 10 0 A0A0A0MRJ3;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-6;Q8NEY1-5;H0Y6F6 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 SIGS(0.333)PES(0.333)T(0.333)PK 107.06 0.0088446 0 8239.3 9476.8 10133 8849.1 8191.2 7325.9 7967.7 8325.4 9102.3 7617.1 TRUE FALSE 7538.504269 8859.858598 9445.200192 9530.659215 7864.927159 7740.686127 7436.189271 8252.611906 10048.51666 8560.763854 0.880587807 1.034937857 1.103312783 1.113295423 0.91871792 0.904205075 0.868636187 0.964004153 1.17378739 1 13.06352381 SIGS(ph)PESTPK ddPTM_A459_MK2206_30min_R2 2 SIGSPESTPK 10 0 A0A0A0MRJ3;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-6;Q8NEY1-5;H0Y6F6 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 S(0.004)IGS(0.714)PES(0.076)T(0.206)PK;S(0.007)IGS(0.91)PES(0.012)T(0.071)PK 125.97 0.0035357 55679000 447340 587840 545560 561320 467310 386320 519900 445140 431030 476880 TRUE FALSE 481588.6943 558648.7204 563748.6981 515458.3604 448961.0614 401021.6783 451636.5055 503321.3264 468520.2103 461319.4447 1.043937558 1.210980215 1.222035413 1.117356674 0.97321079 0.869292814 0.979010338 1.091047282 1.015609066 1 18.81540658 -6.151477793 4.086146096 0.986378072 1.164559025 0.574866959 0.068070866 0.177624399 5.122408571 0.022279823 0.029342211 7.06E-07 6.151477793 0.178180952 SIGVS(ph)NFNHR ddPTM_A459_MK2206_30min_R1 2 SIGVSNFNHR 10 0 P52895;B4DK69;S4R3P0 P52895 AKR1C2 Aldo-keto reductase family 1 member C2 1 SIGVS(1)NFNHR;SIGVS(1)NFNHR 98.942 0.012584 26040000 9635.5 8746.8 8715.1 7016.9 10201.2 9441.6 9576.8 7118.8 7553.3 6292.3 TRUE FALSE 8815.950127 8177.38173 8123.543294 7557.342854 9794.864603 9976.175233 8937.949146 7056.561082 8338.492565 7071.837628 1.246627905 1.156330527 1.148717451 1.068653333 1.385052248 1.410690652 1.263879294 0.997839805 1.179112559 1 12.78786944 -7.752490946 24.99717426 1.06635713 1.238819188 0.369117256 0.108306844 232.7182511 650095.8232 0.057367162 0.032496819 1.77E-08 7.752490946 0.172462057 SIGVS(ph)NFNHR ddPTM_A459_MK2206_30min_R2 2 SIGVSNFNHR 10 0 P52895;B4DK69;S4R3P0 P52895 AKR1C2 Aldo-keto reductase family 1 member C2 1 SIGVS(1)NFNHR;SIGVS(1)NFNHR 110.51 0.006228 30945000 54538 72479 59115 83241 64694 64284 80324 61440 56659 62453 TRUE FALSE 58713.47121 68879.79825 61085.8646 76439.94403 62153.7885 66730.37267 69777.36231 69470.41896 61587.0974 60415.16372 0.971833354 1.140107781 1.011101532 1.265244341 1.028777954 1.104530197 1.154964383 1.149883815 1.019398006 1 15.88262308 -4.75167542 24.69026989 1.104266445 0.971833041 0.175261734 0.080188617 552.6412352 1397357.236 0.018627768 0.239315657 1.77E-05 4.75167542 -0.132433403 SIGVSNFNHR ddPTM_A459_MK2206_30min_R1 2 SIGVSNFNHR 10 0 P52895;B4DK69;S4R3P0 P52895 AKR1C2 Aldo-keto reductase family 1 member C2 0 ; 185.96 0.00016875 174608000 24290 17252.6 19646.3 15267 28835 25899 27148 22032.7 15097.2 14629.1 FALSE TRUE 22224.00795 16129.4526 18312.76389 16442.86699 27686.44089 27365.379 25337.00645 21840.07043 16666.60797 16441.46335 1.351704983 0.981022933 1.113815936 1.000085372 1.683940188 1.664412614 1.54104327 1.328353198 1.013693709 1 14.00505109 -6.239868705 24.94256932 1.411406929 1.102480458 0.209459428 0.240187291 1110.297908 1283857.912 0.073226564 0.094443693 5.76E-07 6.239868705 -0.308926471 SIGVSNFNHR ddPTM_A459_MK2206_30min_R2 2 SIGVSNFNHR 10 0 P52895;B4DK69;S4R3P0 P52895 AKR1C2 Aldo-keto reductase family 1 member C2 0 ; 181.53 0.00016875 151660000 784160 1276810 1024170 1371360 1298150 1526500 1359100 954640 1287140 996360 FALSE TRUE 844195.8925 1213405.472 1058315.317 1259315.501 1247178.108 1584592.027 1180648.537 1079414.726 1399093.111 963848.8548 0.875859206 1.258916754 1.098009622 1.306548734 1.293956103 1.644025429 1.224931203 1.119900408 1.451568992 1 19.8784474 -4.168667753 1.046308713 1.298586994 3.29E-11 0.297745392 0.175604189 7.079110373 2.560275157 0.054845437 13.97661626 6.78E-05 4.168667753 -1.298586994 SILAKPSS(ph)SPDPR ddPTM_A459_MK2206_30min_R1 1 SILAKPSSSPDPR 13 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 SILAKPS(0.028)S(0.486)S(0.486)PDPR 71.558 0.031626 15231000 8291.1 7703.9 6848.5 6802.9 7392.9 6032.5 6652.5 6929.9 5927.5 5244.7 TRUE FALSE 7585.898407 7202.37471 6383.642901 7326.860537 7098.425138 6374.054937 6208.723863 6869.312615 6543.684837 5894.453031 1.286955442 1.221890254 1.082991563 1.243009402 1.204255102 1.081364955 1.053316369 1.165385928 1.110142841 1 12.52514223 -6.758776706 24.82116033 1.090583276 1.203622046 0.500376079 0.062481042 62.80089011 585424.7325 0.021521216 0.020591691 1.74E-07 6.758776706 0.11303877 SILAKPSSS(ph)PDPR ddPTM_A459_MK2206_30min_R2 1 SILAKPSSSPDPR 13 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 SILAKPS(0.014)S(0.034)S(0.951)PDPR 148.85 0.0025406 12518000 36608 51124 38996 51473 38104 36125 49799 40615 38342 44552 TRUE FALSE 39410.73663 48585.2565 40296.10718 47267.49125 36607.8455 37499.76219 43260.33148 45923.51995 41676.91785 43098.27189 0.914438907 1.127313332 0.934981971 1.096737507 0.849404022 0.870098975 1.003760234 1.065553628 0.967020626 1 15.3953424 -10.97365034 17.70158054 1 0.983405287 0.003450677 0.0888148 0 0 0.086554017 0.020992433 1.06E-11 10.97365034 -0.016594713 SILPYPVS(ph)PK ddPTM_A459_MK2206_30min_R1 1 SILPYPVSPK 10 0 Q8IWI9;Q8IWI9-3;H3BP52;H3BTF4 Q8IWI9 MGA MAX gene-associated protein 1 SILPYPVS(1)PK 92.906 0.025967 43669000 12775 16054 14195 14602 9222.4 9985.8 9696.5 9163.9 11883 8672.5 TRUE FALSE 11688.41917 15008.88168 13231.48295 15726.64857 8855.052279 10551.18737 9049.664177 9083.780988 13118.28037 9746.914774 1.199191686 1.539859743 1.357504734 1.613500162 0.908497969 1.082515607 0.928464482 0.93196475 1.345890538 1 13.25072991 -6.267056374 24.997804 1.026747238 1.430538107 0.606238517 0.155751573 300.2979503 1336440.236 0.046062121 0.053681808 5.41E-07 6.267056374 0.403790868 SILPYPVS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SILPYPVSPK 10 0 Q8IWI9;Q8IWI9-3;H3BP52;H3BTF4 Q8IWI9 MGA MAX gene-associated protein 1 SILPYPVS(1)PK;SILPYPVS(1)PK 124.48 0.0038268 86802000 453460 429740 416800 380090 372940 265250 468350 378590 273400 431880 TRUE FALSE 488177.2463 408399.7365 430695.904 349035.4312 358296.5017 275344.2746 406855.0824 428073.0129 297179.8378 417787.791 1.16848136 0.977529132 1.030896338 0.835437125 0.85760405 0.659052946 0.97383191 1.024618292 0.711317669 1 18.67241081 -4.951355688 1.080036332 0.865137306 1.235364635 0.368808496 0.11787431 1.514871451 1.769538563 0.038778886 0.602675657 1.12E-05 4.951355688 0.370227329 SILS(ph)PGGSCGPIK ddPTM_A459_MK2206_30min_R2 2 SILSPGGSCGPIK 13 0 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347;P78347-5 A0A494C1K3 GTF2I General transcription factor II-I 1 S(0.001)ILS(0.999)PGGSCGPIK;S(0.026)ILS(0.974)PGGSCGPIK 181.67 0.00011565 67077000 89497 96611 92591 102321 107394 91660 111328 82747 90180 102032 TRUE FALSE 96348.95913 91813.43823 95677.93773 93961.04699 103177.1719 95148.18553 96710.49987 93562.31701 98023.69339 98702.7042 0.976153186 0.930201852 0.969354776 0.95196021 1.045332778 0.963987626 0.979816112 0.947920503 0.993120646 1 16.59080199 SILSPGGS(ph)CGPIK ddPTM_A459_MK2206_30min_R2 1 SILSPGGSCGPIK 13 0 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347;P78347-5 A0A494C1K3 GTF2I General transcription factor II-I 1 SILS(0.247)PGGS(0.753)CGPIK 96.464 0.014162 112490000 20522 19318 22546 22539 19755 17949 21609 16469 15913 21514 TRUE FALSE 22093.1801 18358.69621 23297.67239 20697.4916 18979.31944 18632.06177 18771.71234 18621.55485 17297.08398 20811.99994 1.061559685 0.882120712 1.119434579 0.994497966 0.911941163 0.895255709 0.901965808 0.89475086 0.831111091 1 14.34512799 -6.251325477 4.080757478 0.898819571 1.014118156 0.382954914 0.06765331 0.222118566 8.888619708 0.020168251 0.025019281 5.61E-07 6.251325477 0.115298585 SILVS(ph)PTGPSR ddPTM_A459_MK2206_30min_R1 4 SILVSPTGPSR 11 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 SILVS(0.858)PT(0.142)GPSR;SILVS(0.999)PT(0.001)GPSR;S(0.012)ILVS(0.983)PT(0.006)GPSR;SILVS(0.945)PT(0.055)GPSR 152.96 0.00056908 102783000 10421.7 9601.8 9457.5 8096.5 10375.3 9073.1 10301 9272.1 7469.71 6951 TRUE FALSE 9535.279688 8976.721075 8815.55125 8720.093833 9962.029831 9586.811081 9613.839085 9191.035007 8246.213085 7812.142357 1.220571676 1.1490729 1.128442218 1.116223109 1.275198195 1.227167996 1.230627739 1.176506339 1.055563597 1 12.93150252 -8.351615619 2.900333084 1.00304141 1.191035246 0.664262552 0.0471471 0.168528525 2.628714416 0.049611215 0.013589349 4.45E-09 8.351615619 0.187993837 SILVS(ph)PTGPSR ddPTM_A459_MK2206_30min_R2 6 SILVSPTGPSR 11 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 SILVS(0.995)PT(0.005)GPSR;SILVS(0.911)PT(0.089)GPSR;SILVS(0.994)PT(0.006)GPSR;SILVS(0.998)PT(0.001)GPSR;S(0.001)ILVS(0.769)PT(0.229)GPSR;SILVS(0.609)PT(0.391)GPSR 167.84 0.00051349 119465100 198751 203869 188020 212615 230570 227197 229586 155048 186393 200042 TRUE FALSE 213967.5294 193745.1619 194288.493 195243.6744 221516.6633 235843.141 199441.0824 175313.306 202605.1262 193514.6459 1.105691656 1.001191207 1.003998907 1.008934871 1.144702316 1.218735357 1.030625261 0.905943347 1.046975671 1 17.56208323 -7.524407299 24.99853405 0.979532548 1.077414619 0.265925438 0.071812944 76.35147612 1248604.795 0.036615094 0.02133334 2.99E-08 7.524407299 0.097882071 SIMVQS(ph)PEK ddPTM_A459_MK2206_30min_R1 1 SIMVQSPEK 9 0 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase 1 SIMVQS(1)PEK 140.14 0.0023189 17405000 4236.6 5650.3 5951.3 4386.3 3483.6 3479.7 3854.4 3551.8 4812.6 3934.2 TRUE FALSE 3876.254923 5282.464443 5547.342337 4724.133586 3344.840835 3676.717607 3597.280009 3520.746987 5312.886992 4421.598398 0.876663725 1.194695666 1.254601128 1.068422132 0.756477756 0.831535856 0.813570045 0.796261141 1.201576108 1 12.11035228 -6.090634281 6.382565568 0.882933076 1.124287383 0.289052794 0.151526105 0.269119942 15.73029355 0.044945705 0.05856314 8.12E-07 6.090634281 0.241354307 SIMVQS(ph)PEK ddPTM_A459_MK2206_30min_R2 1 SIMVQSPEK 9 0 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase 1 S(0.001)IMVQS(0.999)PEK 114.76 0.0083808 22672000 112000 123920 116030 92645 97853 76406 128900 93678 83914 109770 TRUE FALSE 120574.8061 117766.313 119898.3823 85075.60714 94010.79955 79313.68387 111975.2752 105922.0362 91212.68804 106188.2139 1.135482006 1.109033749 1.12911196 0.801177494 0.885322355 0.746916074 1.054498151 0.997493341 0.858971864 1 16.69626412 -5.744707156 24.99661861 0.904890329 1.122991809 0.559835709 0.088654166 187.8714838 280662.9106 0.025088982 0.043304893 1.80E-06 5.744707156 0.21810148 SINEENGEVS(ph)EDQSQNK ddPTM_A459_MK2206_30min_R1 2 SINEENGEVSEDQSQNK 17 0 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 SINEENGEVS(0.936)EDQS(0.064)QNK;SINEENGEVS(0.807)EDQS(0.193)QNK 272.13 9.37E-52 12052400 5066.6 5101.5 5177.2 4473.7 4641.7 4243.7 5094 5238.9 4850.3 4550.4 TRUE FALSE 4635.659064 4769.391423 4825.786089 4818.265149 4456.81126 4483.974627 4754.188555 5193.09685 5354.506042 5114.137906 0.906439981 0.932589522 0.94361673 0.942146113 0.871468729 0.876780155 0.929616808 1.015439346 1.047000715 1 12.32027535 -7.747061442 4.109991464 1.025962551 0.913324961 0.788885679 0.025298686 0.099107401 3.763066471 0.015214114 0.007655258 1.79E-08 7.747061442 -0.11263759 SINEENGEVS(ph)EDQSQNK ddPTM_A459_MK2206_30min_R2 4 SINEENGEVSEDQSQNK 17 0 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 SINEENGEVS(1)EDQSQNK;SINEENGEVS(0.953)EDQS(0.047)QNK;SINEENGEVS(1)EDQSQNK;S(0.001)INEENGEVS(0.999)EDQSQNK 178.52 8.53E-08 39330900 144660 136717 144223 144317 149307 124202 165473 121717 128063 157670 TRUE FALSE 155735.2808 129927.8326 149031.3228 132525.8395 143444.457 128928.5941 143746.1963 137625.8298 139201.6883 152525.2408 1.021045959 0.851844796 0.977092854 0.868878087 0.940463731 0.845293497 0.942442022 0.902315112 0.9126469 1 17.21868848 -10.61789741 4.335888892 1.000009906 0.915129381 0.177810288 0.052571041 9608146.52 23528811.94 474.2242885 0.011441087 2.41E-11 10.61789741 -0.084880524 SINHQIES(ph)PSER ddPTM_A459_MK2206_30min_R1 3 SINHQIESPSER 12 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 SINHQIES(0.971)PS(0.029)ER;SINHQIES(0.997)PS(0.003)ER;SINHQIES(0.965)PS(0.035)ER 188.63 0.00012455 36630000 7547.8 4690.22 5615.1 5064.3 10186.5 8682.5 8899 6906.4 4366.8 4929.9 TRUE FALSE 6905.819975 4384.885826 5233.962657 5454.353263 9780.750135 9174.095647 8305.363947 6846.018073 4820.744487 5540.653231 1.246390938 0.791402321 0.944647217 0.984424225 1.765270218 1.655778708 1.498986419 1.235597643 0.870067894 1 12.43584036 -6.06475837 23.26871027 1.373508221 0.972316054 0.265441899 0.277397032 124.2825041 44656.04783 0.086214659 0.111302869 8.61E-07 6.06475837 -0.401192167 SINHQIES(ph)PSER ddPTM_A459_MK2206_30min_R2 4 SINHQIESPSER 12 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 SINHQIES(0.961)PS(0.039)ER;SINHQIES(0.981)PS(0.018)ER;SINHQIES(0.5)PS(0.5)ER;SINHQIES(0.785)PS(0.215)ER 169.17 0.00035853 71165500 73499.2 109509 105870.4 156758 123884 166157 131305 103092 145392 101645.6 TRUE FALSE 79126.35526 104070.9423 109400.0663 143950.37 119019.6917 172480.2211 114064.4958 116566.4784 158037.9334 98328.9124 0.804710978 1.05839615 1.112593068 1.463967885 1.210424165 1.754115009 1.160030077 1.185475111 1.607237683 1 16.58532807 -5.147389155 1.37291006 1.35179015 0.772752716 0.374400531 0.217429695 0.718654746 1.898251366 0.063526672 0.48014761 7.12E-06 5.147389155 -0.579037434 SIPAGAEPGEKGS(ph)AR ddPTM_A459_MK2206_30min_R1 2 SIPAGAEPGEKGSAR 15 1 A6NGP5;Q9H910;Q9H910-3;Q9H910-2;H3BU16 A6NGP5;Q9H910-2 HN1L Hematological and neurological expressed 1-like protein 1 SIPAGAEPGEKGS(1)AR;SIPAGAEPGEKGS(1)AR 114.96 0.0091802 19223000 7010.5 6414.1 6333.1 5442.4 6421.2 5421.8 6418.6 6030.8 5213.9 5453.9 TRUE FALSE 6414.220161 5996.540924 5903.226817 5861.574591 6165.430007 5728.777631 5990.426905 5978.073351 5755.903563 6129.570307 1.046438794 0.978297111 0.963073514 0.956278221 1.00585028 0.934613251 0.977299648 0.975284245 0.939038672 1 12.58157023 -4.761357026 3.696032974 0.968069513 1.056729542 0.530939436 0.021706511 0.210608464 4.886738398 0.005123837 0.053151037 1.73E-05 4.761357026 0.088660029 SIPAGAEPGEKGS(ph)AR ddPTM_A459_MK2206_30min_R2 1 SIPAGAEPGEKGSAR 15 1 A6NGP5;Q9H910;Q9H910-3;Q9H910-2;H3BU16 A6NGP5;Q9H910-2 HN1L Hematological and neurological expressed 1-like protein 1 SIPAGAEPGEKGS(1)AR 130.47 0.0043718 0 5147.4 6133.5 6011.1 5705.5 4803.8 4826.7 6503.3 4566.7 4972.5 5724.9 TRUE FALSE 5541.488902 5828.919309 6211.507074 5239.342399 4615.178675 5010.383451 5649.408898 5163.58337 5404.999062 5538.096982 1.00061247 1.052513043 1.121595937 0.946054649 0.833351003 0.904712118 1.020099308 0.932375035 0.975966849 1 12.4351746 -5.832628253 8.993000688 0.938349873 1.057472811 0.459982074 0.056126635 0.262732278 30.44846565 0.016678593 0.024815072 1.47E-06 5.832628253 0.119122938 SIPLECPLS(ph)SPK ddPTM_A459_MK2206_30min_R1 1 SIPLECPLSSPK 12 0 Q92667-2;Q92667;I3L2A2;I3L2N7 Q92667-2 AKAP1 "A-kinase anchor protein 1, mitochondrial" 1 SIPLECPLS(0.981)S(0.019)PK 232.5 3.54E-10 18241000 4710.7 5138.4 3331.4 3743.5 2913.2 2257.9 2762.4 2374.6 3225 2821 TRUE FALSE 4310.030228 4803.889226 3105.27385 4031.825019 2797.161075 2385.740347 2578.125336 2353.839123 3560.250291 3170.486777 1.359422237 1.5151898 0.979431257 1.271673816 0.882249721 0.752483929 0.813163882 0.742421996 1.122934912 1 11.63048864 -5.652519115 1.021957351 0.863105662 1.465745539 0.598771101 0.160378427 0.436963818 0.820170789 0.059879723 0.211934547 2.23E-06 5.652519115 0.602639877 SIPLECPLS(ph)SPK ddPTM_A459_MK2206_30min_R2 2 SIPLECPLSSPK 12 0 Q92667-2;Q92667;I3L2A2;I3L2N7 Q92667-2 AKAP1 "A-kinase anchor protein 1, mitochondrial" 1 SIPLECPLS(0.984)S(0.016)PK;SIPLECPLS(0.961)S(0.039)PK 258.23 5.22E-25 13739100 198503 125212 127377 92417 90951 80011 147462 81791 87018 99537 TRUE FALSE 213700.5423 118994.1542 131623.6856 84866.23547 87379.80675 83055.87467 128100.0623 92481.36453 94586.66835 96289.11584 2.219363429 1.235800673 1.36696328 0.881368935 0.907473352 0.862567632 1.330369078 0.960455018 0.982319419 1 16.55508511 -2.334305233 1.012072694 1.005945146 199.9999631 0.832629637 0.159739427 105.2483024 0.877068002 0.050922996 47686.39405 0.004631213 2.334305233 198.9940179 up SIPLECPLSS(ph)PK ddPTM_A459_MK2206_30min_R1 1 SIPLECPLSSPK 12 0 Q92667-2;Q92667;I3L2A2;I3L2N7 Q92667-2 AKAP1 "A-kinase anchor protein 1, mitochondrial" 1 SIPLECPLS(0.414)S(0.586)PK 134.56 0.0015822 15290000 5253.3 5598 3339.1 3789.7 4285 2958.1 3302.8 2981.5 3744 3436 TRUE FALSE 4806.479249 5233.569183 3112.451195 4081.583351 4114.319376 3125.585066 3082.476238 2955.43306 4133.202198 3861.67762 1.244660928 1.355257921 0.805984212 1.056945647 1.065422798 0.809385291 0.798222053 0.765323611 1.070312596 1 11.91501202 -5.256596367 24.99931783 0.914645999 1.29995946 0.621540295 0.118048728 257.9240168 1331375.86 0.031636887 0.078301624 5.54E-06 5.256596367 0.385313462 SIPTDNQIK ddPTM_A459_MK2206_30min_R2 1 SIPTDNQIK 9 0 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 133.57 0.042803 2993900 12994 20183 15895 18319 18992 17477 16905 15604 15923 16895 FALSE TRUE 13988.83063 19180.74157 16424.93137 16822.2791 18246.27865 18142.09948 14685.35319 17643.49638 17307.95376 16343.71753 0.855914855 1.173584989 1.004969116 1.029281072 1.116409325 1.110035061 0.898531999 1.079527735 1.058997362 1 13.99644856 -4.736042772 24.96152643 1.051648875 0.855913913 0.400008556 0.072176329 2612.405201 2567515.137 0.017649688 1.320047095 1.84E-05 4.736042772 -0.195734962 SIQADGLVWGS(ph)SK ddPTM_A459_MK2206_30min_R2 1 SIQADGLVWGSSK 13 0 P24534 P24534 EEF1B2 Elongation factor 1-beta 1 SIQADGLVWGS(0.5)S(0.5)K 133.23 0.0013435 6604700 28492 33217 25498 27697 26883 19245 39798 32444 19295 28370 TRUE FALSE 30673.36943 31567.49208 26348.09059 25434.0665 25827.43834 19977.38196 34572.47479 36684.5422 20973.24422 27444.28922 1.117659458 1.150239011 0.960057314 0.926752604 0.941086072 0.727924917 1.259732927 1.336691284 0.764211602 1 14.74421836 -10.05597764 15.74773777 1 1.025163226 0.000510234 0.188072045 0 0 0.187841439 0.045558241 8.79E-11 10.05597764 0.025163226 SIQADGLVWGSS(ph)K ddPTM_A459_MK2206_30min_R2 1 SIQADGLVWGSSK 13 0 P24534 P24534 EEF1B2 Elongation factor 1-beta 1 SIQADGLVWGS(0.068)S(0.932)K 157.07 0.00036504 3854500 38271 35164 26515 30881 32649 20725 42827 38959 22536 33942 TRUE FALSE 41201.05719 33417.80689 27398.99687 28357.92352 31367.03621 21513.7044 37203.76346 44051.07507 24496.14054 32834.47532 1.25481089 1.017765826 0.834458191 0.863663063 0.955307978 0.655216939 1.133070137 1.341610446 0.746049398 1 15.00292378 -9.472290531 12.64109851 1.000044689 0.976675035 0.000983721 0.206558145 0 0 0.204266186 0.049541827 3.37E-10 9.472290531 -0.023369655 SIQDLTVTGTEPGQVSS(ph)R ddPTM_A459_MK2206_30min_R1 1 SIQDLTVTGTEPGQVSSR 18 0 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 SIQDLTVTGTEPGQVS(0.235)S(0.764)R 191.71 2.43E-10 21559000 4164.2 4236.2 4606.6 3906.7 5358.4 4634.7 5317.2 4518.7 4133.5 3963.4 TRUE FALSE 3810.012923 3960.42261 4293.916827 4207.594711 5144.963581 4897.112709 4962.49929 4479.193482 4563.192117 4454.415914 0.855333897 0.889100319 0.963968545 0.944589547 1.155025413 1.099383803 1.11406285 1.005562473 1.024419858 1 12.12102056 -5.816205529 1.773639224 1.068624269 0.881269683 0.653778245 0.054209594 0.221780874 1.423819755 0.018024543 0.03542249 1.53E-06 5.816205529 -0.187354586 SIQDLTVTGTEPGQVSS(ph)R ddPTM_A459_MK2206_30min_R2 1 SIQDLTVTGTEPGQVSSR 18 0 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 SIQDLT(0.039)VT(0.023)GT(0.048)EPGQVS(0.046)S(0.843)R 143.72 0.00029079 10459000 39769 50103 51336 60878 55931 56350 58065 42905 42524 55487 TRUE FALSE 42813.74522 47614.95788 53047.51662 55904.07266 53734.86791 58494.43874 50440.99575 48512.83081 46222.66065 53676.46373 0.79762604 0.887073301 0.988282628 1.041500665 1.001088078 1.089759546 0.939722781 0.903800799 0.86113461 1 15.71200201 -4.990159897 2.640253721 0.98027063 0.794194162 0.462617794 0.062109702 0.319489445 3.926812915 0.018263472 0.107618713 1.02E-05 4.990159897 -0.186076469 SIQEIQELDKDDESLR ddPTM_A459_MK2206_30min_R1 2 SIQEIQELDKDDESLR 16 1 J3KTF8;J3QQX2;P52565;J3KRE2;J3KRY1;P52565-2;J3KS60 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 0 ; 210.08 1.38E-07 39626000 5279.7 6482.8 6307.7 5246.2 5492.5 4615.5 5294.2 5569.1 5752.5 5892.5 FALSE TRUE 4830.63379 6060.768542 5879.550898 5650.263233 5273.722094 4876.825621 4941.033578 5520.409946 6350.492961 6622.507386 0.729426712 0.915177317 0.887813415 0.85319093 0.796333139 0.736401689 0.746097103 0.833583056 0.958925765 1 12.69316183 -8.300299986 3.326504004 0.995150705 0.813114612 0.563904506 0.059527458 0.19819695 4.218780602 0.060612738 0.016908957 5.01E-09 8.300299986 -0.182036093 SIQEIQELDKDDESLR ddPTM_A459_MK2206_30min_R2 4 SIQEIQELDKDDESLR 16 1 J3KTF8;J3QQX2;P52565;J3KRE2;J3KRY1;P52565-2;J3KS60 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 0 ;;; 156.72 0.00023006 40449400 99384 93295 107539 98147 102566 82045.4 105575 89417 86926 110353 FALSE TRUE 106992.9155 88662.10596 111124.2966 90128.07614 98538.74349 85167.69519 91712.87568 101104.1089 94486.66635 106752.1906 1.002254987 0.830541326 1.040955655 0.844273786 0.923060622 0.79780747 0.859119378 0.947091655 0.885102833 1 16.70390615 -4.112008085 4.904285424 0.900394681 11.57875803 0.141382307 0.072752639 1604.271386 288.8466179 0.017522516 188717.4395 7.73E-05 4.112008085 10.67836335 SIQFVDWCPTGFK ddPTM_A459_MK2206_30min_R1 1 SIQFVDWCPTGFK 13 0 P68363;P68363-2;P68366-2;P68366 P68363;P68366-2 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 132.86 0.019122 14381000 6021 5727.9 5929.1 5791.6 5737.3 5987.1 6255.2 5827.8 4958.2 5623.9 FALSE TRUE 5508.882332 5355.012669 5526.649211 6237.670036 5508.771192 6326.084428 5837.927021 5776.848159 5473.622633 6320.63119 0.871571551 0.847227517 0.874382486 0.986874546 0.871553968 1.000862768 0.923630385 0.913966973 0.865993042 1 12.62585292 -5.589040753 9.155616772 0.93322152 0.859739321 0.349012776 0.045821995 0.335100809 42.96510021 0.011950978 0.02073744 2.58E-06 5.589040753 -0.0734822 SIQPQVS(ph)PR ddPTM_A459_MK2206_30min_R1 2 SIQPQVSPR 9 0 A0A2R8YCL1;Q13322-3;Q13322-2;Q13322-4;Q13322 A0A2R8YCL1 GRB10 Growth factor receptor-bound protein 10 1 SIQPQVS(1)PR;SIQPQVS(1)PR 124.39 0.0053263 52944000 4935.8 4846.8 5076.7 4625.2 5650 4905.6 5426.2 5673.1 4646.4 4473.8 TRUE FALSE 4515.984291 4531.272439 4732.107748 4981.433705 5424.948536 5183.350833 5064.228099 5623.500685 5129.409907 5028.048119 0.898158527 0.9011991 0.941142097 0.990729123 1.078937275 1.030887277 1.007195631 1.118426187 1.020159272 1 12.29578274 -5.794328783 1.958635349 1.046288539 0.900978441 0.746550494 0.033896809 0.153461762 1.202320531 0.010247553 0.019747464 1.61E-06 5.794328783 -0.145310098 SIQPQVS(ph)PR ddPTM_A459_MK2206_30min_R2 4 SIQPQVSPR 9 0 A0A2R8YCL1;Q13322-3;Q13322-2;Q13322-4;Q13322 A0A2R8YCL1 GRB10 Growth factor receptor-bound protein 10 1 SIQPQVS(1)PR;SIQPQVS(1)PR;SIQPQVS(1)PR;SIQPQVS(1)PR 139.76 0.002352 187191000 265547 389138 299994 376400 359583 358290 340213 289837 309009 346193 TRUE FALSE 285877.4825 369813.9728 309995.6502 345646.916 345463.9647 371924.977 295542.6244 327719.6911 335886.0443 334896.7508 0.853628713 1.104262648 0.92564544 1.032099939 1.031553647 1.110566096 0.882488778 0.978569336 1.002954025 1 18.35335685 -4.734155656 24.89990587 1.00516696 0.853627878 0.323646601 0.066680747 3609.880726 3294297.334 0.016352659 1.505103751 1.84E-05 4.734155656 -0.151539082 SIS(ph)ADDDLQESSR ddPTM_A459_MK2206_30min_R1 1 SISADDDLQESSR 13 0 P18615;P18615-3;A0A0A0MT02;P18615-4;A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 NELFE Negative elongation factor E 1 S(0.001)IS(0.999)ADDDLQESSR 154.13 0.000393 15399000 2481.4 2025.2 2560.7 1953.4 2283.3 1659.3 2054.6 1722.6 1609 1464.9 TRUE FALSE 2270.3439 1893.359112 2386.886819 2103.851206 2192.351326 1753.248132 1917.541383 1707.53949 1776.261308 1646.382871 1.378989018 1.150011425 1.44977627 1.277862667 1.331616943 1.064909118 1.164699546 1.037146049 1.07888714 1 10.68508416 -6.76226923 24.99234545 1.077423166 1.313467763 0.698126577 0.081596969 12.83314121 386483.8862 0.026701992 0.024932802 1.73E-07 6.76226923 0.236044596 SIS(ph)ADDDLQESSR ddPTM_A459_MK2206_30min_R2 2 SISADDDLQESSR 13 0 P18615;P18615-3;A0A0A0MT02;P18615-4;A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 NELFE Negative elongation factor E 1 S(0.037)IS(0.963)ADDDLQESSR;S(0.181)IS(0.819)ADDDLQESSR 101.2 0.010307 7142500 42784 44904 46481 58719 41125 47061 53092 37475 44125 44278 TRUE FALSE 46059.57594 42674.13266 48030.65334 53921.46987 39510.22586 48851.93933 46120.95663 42373.11117 47962.91274 42833.21249 1.075323873 0.996286064 1.121341374 1.258870552 0.922420327 1.14051542 1.076756889 0.989258305 1.119759877 1 15.38644226 -7.548017972 24.44750562 1.039306935 1.085852657 0.058188625 0.089189905 619.8985604 602832.1686 0.041708246 0.024081567 2.83E-08 7.548017972 0.046545721 SIS(ph)ADSFDQR ddPTM_A459_MK2206_30min_R1 1 SISADSFDQR 10 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 S(0.004)IS(0.995)ADSFDQR 121.36 0.0036008 0 845.91 959.59 1126.5 762.34 938.29 939.65 1014.2 714.51 949.94 913.05 TRUE FALSE 773.9609124 897.1205166 1050.036319 821.0555589 900.9159224 992.852171 946.5445685 708.2631144 1048.689662 1026.165527 0.754226187 0.874245424 1.023262126 0.800119997 0.877944053 0.967536079 0.922409244 0.690203574 1.021949807 1 10.00304775 -14.52287873 0.282028798 1.886995517 0.87349386 0.119110651 0.103264788 554.6164685 5.29012735 288.0256683 0.114772752 3.00E-15 14.52287873 -1.013501658 SIS(ph)ADSFDQR ddPTM_A459_MK2206_30min_R2 1 SISADSFDQR 10 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 S(0.001)IS(0.951)ADS(0.048)FDQR 97.163 0.020155 0 24793 26064 25945 30733 22522 24093 28636 21786 23627 20721 TRUE FALSE 26691.17114 24769.69966 26809.99335 28222.01559 21637.67312 25009.876 24876.0588 24633.505 25682.03375 20044.87547 1.331570814 1.235712325 1.337498624 1.407941677 1.079461589 1.247694257 1.241018376 1.228917837 1.281226905 1 14.29094583 -14.41586935 0.178308296 3.23E-12 1.317812923 0.504822641 0.080651794 112.4759021 1.114132648 40.0390377 0.264378437 3.84E-15 14.41586935 1.317812923 SIS(ph)CGPSSR ddPTM_A459_MK2206_30min_R1 1 SISCGPSSR 9 0 Q5VU43-13;Q5VU43-2 Q5VU43-13 PDE4DIP Myomegalin 1 S(0.004)IS(0.995)CGPS(0.001)SR 113.67 0.00898 7924200 2521.1 2117.2 2059.9 1948.3 2832.5 2284 2912.5 2656.3 1881.6 1927.7 TRUE FALSE 2306.667206 1979.369895 1920.079727 2098.358404 2719.675527 2413.318106 2718.212439 2633.076249 2077.199053 2166.518029 1.064688673 0.913618012 0.886251442 0.968539553 1.255320976 1.113915543 1.254645658 1.215349336 0.958773029 1 11.08116253 -6.156069485 6.922614762 1.148539336 0.947559574 0.405170401 0.102559383 0.228651832 13.11981792 0.029812142 0.038642604 6.98E-07 6.156069485 -0.200979762 SIS(ph)ESSR ddPTM_A459_MK2206_30min_R1 1 SISESSR 7 0 Q9H307 Q9H307 PNN Pinin 1 S(0.358)IS(0.632)ES(0.01)SR 99.136 0.021407 19741000 2834.4 2514.8 2327.7 1824.7 1527.2 1668.9 2778.9 3746.1 523.38 1563.4 TRUE FALSE 2593.319396 2351.086063 2169.702209 1965.23871 1466.36839 1763.391676 2593.524651 3713.348243 577.7872239 1757.085795 1.475920757 1.338059911 1.234829976 1.118464856 0.834545697 1.003588829 1.476037572 2.113356248 0.328832676 1 10.77896892 -1.989613417 0.022232023 2.85E-06 2.777236356 0.042838352 0.435771102 12960.54653 24.03283389 1103.053755 2026.603328 0.010242043 1.989613417 2.777233504 SIS(ph)GTSTSEKPNSMDTANTSPFK ddPTM_A459_MK2206_30min_R1 1 SISGTSTSEKPNSMDTANTSPFK 23 1 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.145)IS(0.385)GT(0.278)S(0.064)T(0.064)S(0.064)EKPNS(0.001)MDTANTSPFK 88.036 0.00012105 14497000 2730.3 2928.1 2504.9 2330.6 2520.4 2670 2575 2746.5 2534 2579.9 TRUE FALSE 2498.073648 2737.480158 2334.874367 2510.103216 2420.007131 2821.173093 2403.226448 2722.48764 2797.418368 2899.517489 0.861548053 0.94411576 0.805263074 0.86569687 0.834624085 0.972980195 0.82883668 0.938945066 0.964787548 1 11.50159712 -8.098532511 2.233202914 0.989968746 0.875246106 0.443084935 0.049460592 0.29701644 2.655555793 0.041758876 0.013182223 7.97E-09 8.098532511 -0.11472264 SIS(ph)LGDSEGPIVATLAQPLR ddPTM_A459_MK2206_30min_R1 2 SISLGDSEGPIVATLAQPLR 20 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 S(0.16)IS(0.839)LGDS(0.002)EGPIVATLAQPLR;S(0.147)IS(0.852)LGDSEGPIVATLAQPLR 251 4.93E-38 790930000 2428.22 2462.16 2652.32 2069.9 2657.94 2430.53 2575.81 2361.99 1903.86 2240.81 TRUE FALSE 2221.687138 2301.872936 2472.287908 2229.324057 2552.068622 2568.144508 2403.982415 2341.33937 2101.77306 2518.41846 0.882175529 0.914015273 0.98168273 0.885207956 1.013361624 1.019744951 0.954560353 0.929686392 0.834560695 1 11.29830231 -5.020132927 4.548412831 0.952114323 0.88720779 0.145374503 0.055091131 0.362692599 19.17239429 0.01456206 0.051124916 9.55E-06 5.020132927 -0.064906532 SIS(ph)LGDSEGPIVATLAQPLR ddPTM_A459_MK2206_30min_R2 6 SISLGDSEGPIVATLAQPLR 20 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 S(0.177)IS(0.823)LGDSEGPIVATLAQPLR;S(0.159)IS(0.841)LGDSEGPIVATLAQPLR;S(0.042)IS(0.958)LGDSEGPIVATLAQPLR;S(0.003)IS(0.997)LGDSEGPIVATLAQPLR;S(0.058)IS(0.942)LGDSEGPIVATLAQPLR;S(0.153)IS(0.844)LGDS(0.003)EGPIVATLAQPLR 201.9 7.61E-16 375625000 361771.11 405023.02 342103.32 478758.26 510833.12 458747.67 500412.92 340091.85 391709.4 437982.64 TRUE FALSE 389468.5843 384910.1658 353508.8739 439642.1787 490775.245 476205.634 434708.1025 384543.0225 425779.5756 423691.3023 0.919227235 0.908468415 0.834354805 1.037647401 1.158332121 1.123944795 1.02600195 0.90760188 1.004928761 1 18.69265399 -5.775857286 24.59539917 1.041302187 0.889461994 0.50469472 0.067795245 171.0360134 291768.7172 0.02188814 0.032639646 1.68E-06 5.775857286 -0.151840193 SIS(ph)LGGAYPNISCLSSLK ddPTM_A459_MK2206_30min_R1 2 SISLGGAYPNISCLSSLK 18 0 P46934-3;P46934-2;P46934;H0Y8X6;H0YA37 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 S(0.002)IS(0.998)LGGAYPNISCLSSLK;S(0.007)IS(0.993)LGGAYPNISCLSSLK 130.38 0.00058454 10186500 1082.2 1382.87 1416.84 1306.42 1675.44 1351.2 1292.04 1289.78 1195.56 1015.82 TRUE FALSE 990.1532071 1292.844912 1320.668848 1407.040695 1608.703677 1427.703776 1205.850369 1278.503589 1319.84274 1141.667451 0.867286885 1.132418123 1.156789438 1.232443558 1.409082545 1.250542595 1.056218576 1.11985639 1.15606584 1 10.15692676 -4.672205149 2.271577498 1.18603964 0.719512803 0.417105539 0.106648687 0.9529265 4.442270306 0.030034341 0.999470627 2.13E-05 4.672205149 -0.466526837 SIS(ph)LGGAYPNISCLSSLK ddPTM_A459_MK2206_30min_R2 2 SISLGGAYPNISCLSSLK 18 0 P46934-3;P46934-2;P46934;H0Y8X6;H0YA37 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 S(0.011)IS(0.988)LGGAYPNISCLSSLK;S(0.011)IS(0.989)LGGAYPNISCLSSLK 111.73 0.0012863 8045500 29481 41085 35409 32449 39668 31979 40528 33447 37703 37540 TRUE FALSE 31738.08803 39044.77864 36589.51839 29797.8129 38110.435 33195.98325 35206.62492 37818.63774 40982.33879 36315.07287 0.873964597 1.075167294 1.007557344 0.820535677 1.049438483 0.91411033 0.969476918 1.041403328 1.128521453 1 15.14828085 -7.821414325 3.854713303 1.069606669 0.960951032 0.250520184 0.078082766 0.306310984 9.072144604 0.044661034 0.020578925 1.51E-08 7.821414325 -0.108655637 SIS(ph)LSQSAENVPASK ddPTM_A459_MK2206_30min_R2 1 SISLSQSAENVPASK 15 0 Q4ADV7-2;Q4ADV7-3;Q4ADV7;H0YFN7 Q4ADV7-2 RIC1 RAB6A-GEF complex partner protein 1 1 S(0.016)IS(0.981)LS(0.001)QS(0.002)AENVPASK 101.2 0.0070975 11750000 61406 60559 62114 64017 64028 49462 65035 56978 54293 66310 TRUE FALSE 66107.29057 57551.72812 64184.84976 58786.60632 61513.93901 51344.31107 56495.82638 64425.22023 59015.307 64146.31013 1.030570432 0.897194679 1.000600808 0.916445641 0.958963016 0.800425012 0.880733845 1.00434803 0.920010939 1 15.96907866 -4.750548563 24.77195026 0.928052572 1.030570678 0.193493388 0.06074174 729.4303569 1659019.711 0.01538651 0.222487461 1.78E-05 4.750548563 0.102518106 SIS(ph)NEGLTLNNSHVSK ddPTM_A459_MK2206_30min_R1 3 SISNEGLTLNNSHVSK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.029)IS(0.969)NEGLT(0.001)LNNSHVSK;SIS(0.99)NEGLT(0.01)LNNSHVSK;S(0.001)IS(0.999)NEGLTLNNSHVSK 214.14 9.94E-09 53677000 18791.4 11632.6 11930.4 8451.5 23203 19864.1 19149.4 14753.6 9951.1 8305.6 TRUE FALSE 17193.09275 10875.31563 11120.59769 9102.435994 22278.77538 20988.78818 17871.97847 14624.61083 10985.55246 9334.560432 1.84187492 1.165059212 1.191335979 0.975132794 2.386697857 2.248503111 1.914603113 1.566716605 1.176868749 1 13.18836637 -6.237077045 24.96419752 1.780499689 1.276900316 0.163505941 0.453192065 1262.578207 1293769.593 0.138905553 0.179241728 5.79E-07 6.237077045 -0.503599373 SIS(ph)NEGLTLNNSHVSK ddPTM_A459_MK2206_30min_R2 2 SISNEGLTLNNSHVSK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.181)IS(0.819)NEGLTLNNSHVSK;S(0.206)IS(0.793)NEGLTLNNSHVSK 226.72 3.04E-15 71680000 64650 154168 94920 233700 214820 246520 219531 127214 164784 124687 TRUE FALSE 69599.65371 146512.2413 98084.58542 214605.9624 206385.0874 255901.4913 190706.316 143841.3066 179116.6145 120618.4734 0.577023169 1.214674976 0.813180458 1.779213054 1.711057035 2.121577932 1.581070549 1.192531314 1.484984923 1 16.88009136 -5.756515142 24.99878438 1.59239757 0.902930929 0.477082028 0.326030886 107.9758873 548150.852 0.0916432 0.152541757 1.75E-06 5.756515142 -0.689466641 SIS(ph)PEVSASR ddPTM_A459_MK2206_30min_R2 3 SISPEVSASR 10 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 SIS(0.999)PEVS(0.001)ASR;S(0.001)IS(0.998)PEVSASR;S(0.499)IS(0.501)PEVSASR 136.5 0.0018488 64586000 429796 410071 354156 384166 424426 404973 415977 319916 338832 380280 TRUE FALSE 462701.5122 389707.4704 365963.3843 352778.4089 407760.9027 420384.5313 361358.7202 361730.1196 368302.9949 367871.4947 1.257780282 1.059357618 0.994813106 0.958971853 1.108432995 1.142748316 0.982296061 0.983305651 1.001172964 1 18.48884236 -4.76851476 3.693200907 1.024677093 1.286365795 0.616609765 0.055558632 0.204220236 4.778258229 0.015381435 0.15050936 1.70E-05 4.76851476 0.261688701 SIS(ph)PEWK ddPTM_A459_MK2206_30min_R2 1 SISPEWK 7 0 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 S(0.068)IS(0.932)PEWK 85.676 0.035905 6718300 60902 67324 62137 68132 76240 85045 69722 53122 69769 56738 TRUE FALSE 65564.70395 63980.78806 64208.61657 62565.39766 73246.43452 88281.44707 60567.41765 60065.2278 75837.38151 54886.64371 1.194547517 1.165689569 1.169840461 1.13990205 1.334503799 1.608432236 1.103500115 1.094350533 1.381709217 1 15.7441675 -10.93784192 3.404892828 0.997563874 1.240989566 0.19024337 0.150690158 116409190.3 144950282.4 2716385.67 0.039647498 1.15E-11 10.93784192 0.243425692 SIS(ph)PSALQDLLR ddPTM_A459_MK2206_30min_R1 1 SISPSALQDLLR 12 0 Q92793-2;Q92793 Q92793-2 CREBBP CREB-binding protein 1 S(0.003)IS(0.988)PS(0.009)ALQDLLR 94.547 0.018855 19192000 2943.2 2889.3 3078.2 2588.2 3085.3 2407.5 2910.9 2719 2287.8 2433.1 TRUE FALSE 2692.865385 2701.206045 2869.26036 2787.543612 2962.405968 2543.810569 2716.719172 2695.22807 2525.624997 2734.530797 0.984763232 0.987813356 1.049269719 1.019386439 1.083332457 0.930254862 0.993486406 0.98562725 0.923604517 1 11.41707759 -6.77594377 24.99653138 0.967377057 1.023898076 0.406474718 0.035218311 258.956757 446277.0923 0.012506483 0.011077158 1.68E-07 6.77594377 0.056521019 SIS(ph)TSGPLDKEDTGR ddPTM_A459_MK2206_30min_R1 1 SISTSGPLDKEDTGR 15 1 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.012)IS(0.905)T(0.082)S(0.001)GPLDKEDTGR 160.81 0.00019938 0 1624 1301.4 981.44 916.12 1420.1 1037.3 1175.5 1027.8 1234.6 1032.3 TRUE FALSE 1485.870272 1216.678623 914.8225872 986.6797211 1363.53441 1096.03103 1097.08454 1018.814053 1362.941088 1160.189117 1.280713851 1.048689912 0.788511609 0.850447316 1.175269091 0.944700319 0.94560837 0.878144811 1.17475769 1 10.18014428 -4.823315917 3.836232093 0.964249152 1.298428766 0.376999724 0.119608767 0.237366531 6.033783085 0.030319923 0.203868964 1.50E-05 4.823315917 0.334179614 SISASKAS(ph)PPGDLQNPK ddPTM_A459_MK2206_30min_R1 2 SISASKASPPGDLQNPK 17 1 O00273 O00273 DFFA DNA fragmentation factor subunit alpha 1 SISAS(0.008)KAS(0.992)PPGDLQNPK;SIS(0.016)AS(0.128)KAS(0.855)PPGDLQNPK 99.881 0.0025351 133693000 9995.5 9074.8 8845 8415.8 9149.6 7345.6 8697.5 9587.8 7141.3 6311.9 TRUE FALSE 9145.330237 8484.028871 8244.626044 9063.986374 8785.152057 7761.501524 8117.305644 9503.974875 7883.66369 7093.865824 1.289188499 1.195966921 1.162219056 1.27772171 1.238415312 1.094114509 1.144271099 1.339745508 1.111335326 1 12.79235633 -14.19570834 0.243254336 3.65E-10 1.22637378 0.42792817 0.074284923 150.2202983 1.730793299 74.20469628 0.115769751 6.37E-15 14.19570834 1.22637378 SISASKAS(ph)PPGDLQNPK ddPTM_A459_MK2206_30min_R2 1 SISASKASPPGDLQNPK 17 1 O00273 O00273 DFFA DNA fragmentation factor subunit alpha 1 S(0.002)IS(0.037)AS(0.133)KAS(0.828)PPGDLQNPK 65.416 0.023918 96699000 40799 76540 63680 67174 78598 60155 75176 64781 66365 56640 TRUE FALSE 43922.60281 72739.1349 65803.05942 61685.66932 75511.8476 62444.24068 65305.3009 73248.09913 72137.30774 54791.84144 0.801626696 1.327554121 1.200964554 1.125818511 1.378158602 1.139663115 1.191880017 1.336843172 1.316570238 1 15.74167347 -4.753600007 24.99964304 1.232052659 0.80162592 0.561901618 0.111732751 202.6130959 646078.4567 0.026377203 0.279920712 1.76E-05 4.753600007 -0.430426739 SISGASSGLST(ph)SPLSSPR ddPTM_A459_MK2206_30min_R1 1 SISGASSGLSTSPLSSPR 18 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 SISGASSGLS(0.068)T(0.464)S(0.464)PLS(0.005)SPR 135.57 0.00083864 5182800 1590.1 1612.2 1722.4 1403.3 1718.4 1739.6 1666.3 1508.2 1903.4 1748.3 TRUE FALSE 1454.853645 1507.245487 1605.488287 1511.382409 1649.952489 1838.094649 1555.144167 1495.013966 2101.265241 1964.892603 0.740424002 0.767087975 0.817087043 0.769193393 0.839716373 0.935468252 0.791465226 0.760862942 1.069404627 1 10.94023474 -7.705489007 0.195645523 1.068077721 0.681674947 0.498228076 0.076261752 2.818184703 0.536590917 0.377836488 0.453899709 1.97E-08 7.705489007 -0.386402775 SISGASSGLST(ph)SPLSSPR ddPTM_A459_MK2206_30min_R2 1 SISGASSGLSTSPLSSPR 18 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 SISGASS(0.001)GLS(0.042)T(0.823)S(0.134)PLSSPR 135.09 0.00084796 4093800 18032 18670 16408 21832 17643 20047 18157 17152 18073 18229 TRUE FALSE 19412.54378 17742.87495 16955.03453 20048.25576 16950.24717 20809.90263 15772.96409 19393.82529 19644.95687 17634.18922 1.100846971 1.006163353 0.96148648 1.13689694 0.961214999 1.180088428 0.894453603 1.099785482 1.114026657 1 14.10608763 SISGASSGLSTS(ph)PLSSPR ddPTM_A459_MK2206_30min_R2 2 SISGASSGLSTSPLSSPR 18 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 SISGASSGLS(0.002)T(0.287)S(0.711)PLSSPR;SISGASSGLST(0.017)S(0.983)PLSSPR 223.68 8.95E-15 15904300 40340 56840 44594 66116 58374 54134 63321 54945 53222 60338 TRUE FALSE 43428.46142 54017.40825 46080.7417 60714.11131 56081.94345 56194.1073 55006.87664 62126.50015 57851.15336 58369.176 0.744030743 0.925444078 0.789470485 1.040174206 0.960814377 0.962736005 0.942395977 1.064371718 0.991125065 1 15.83291908 -3.324784883 0.43246463 1.008825417 2.10E-13 0.599315858 0.061340415 11.97726637 0.647833324 0.040522116 8.109918587 0.000473386 3.324784883 -1.008825417 SISGT(ph)STSEKPNSMDTANTSPFK ddPTM_A459_MK2206_30min_R2 2 SISGTSTSEKPNSMDTANTSPFK 23 1 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.012)IS(0.03)GT(0.239)S(0.239)T(0.239)S(0.239)EKPNS(0.001)MDTANTSPFK;S(0.023)IS(0.046)GT(0.702)S(0.105)T(0.105)S(0.02)EKPNSMDTANTSPFK 89.831 0.00025155 36017900 51428 47607 57872 53103 48754 39601 54230 44014 47182 49922 TRUE FALSE 55365.36722 45242.90561 59801.4236 48764.31503 46839.67299 41108.0438 47109.53586 49766.78092 51285.80507 48293.04923 1.146445878 0.936840939 1.238302914 1.00975846 0.969905064 0.851220713 0.975493091 1.030516435 1.061970737 1 15.55952794 -5.982974474 24.99802624 0.977464155 1.095805984 0.295359003 0.086372369 321.1274751 471497.5099 0.024513276 0.036349953 1.04E-06 5.982974474 0.118341829 SISLYYTGEK ddPTM_A459_MK2206_30min_R1 1 SISLYYTGEK 10 0 P19338;H7BY16 P19338 NCL Nucleolin 0 162.64 0.0056161 8607300 1381.7 1765.3 1814.1 1766.8 1961 1541.4 1511.6 1511.3 1287.3 1330.7 FALSE TRUE 1264.179159 1650.378649 1690.963946 1902.879242 1882.889218 1628.672736 1410.763922 1498.086863 1421.119442 1495.557162 0.845289763 1.103520942 1.130658185 1.272354739 1.258988466 1.089007346 0.943303244 1.001691477 0.950227432 1 10.54646734 -7.129459249 4.828434239 0.974913725 1.133571935 0.285342057 0.110606862 0.31080947 10.86582626 0.046398082 0.035715514 7.42E-08 7.129459249 0.158658211 SISLYYTGEK ddPTM_A459_MK2206_30min_R2 1 SISLYYTGEK 10 0 P19338;H7BY16 P19338 NCL Nucleolin 0 130.41 0.038552 2219300 10506 14968 14011 14196 10290 10423 16637 12781 14774 12075 FALSE TRUE 11310.34744 14224.71089 14478.11975 13036.14139 9885.962897 10819.65457 14452.54192 14451.52058 16059.01581 11680.99374 0.968269283 1.217765475 1.239459593 1.116013045 0.846328927 0.926261482 1.237269897 1.237182461 1.374798769 1 13.51187539 -7.298637429 23.6272022 1.232078118 1.061902738 0.222963489 0.143759471 482.2859584 306332.3872 0.064550676 0.043521907 5.03E-08 7.298637429 -0.17017538 SISS(ph)PSVSSETMDKPVDLSTR ddPTM_A459_MK2206_30min_R1 1 SISSPSVSSETMDKPVDLSTR 21 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.007)IS(0.157)S(0.671)PS(0.12)VS(0.007)S(0.037)ETMDKPVDLSTR 132.86 2.48E-05 24086000 2683.1 2590.2 2222.2 1750 2177.1 1904 2489.7 2120.4 1809.1 2106.9 TRUE FALSE 2454.888255 2421.577509 2071.363255 1884.785303 2090.381497 2011.802835 2323.616656 2101.861566 1997.162419 2367.918678 1.036728279 1.022660757 0.874761145 0.795967075 0.882792773 0.849608077 0.981290733 0.887640942 0.843425257 1 11.20940382 -5.24993683 8.789188161 0.883676621 1.03005381 0.480643352 0.058074554 0.15761723 97.77541632 0.014900421 0.036746734 5.62E-06 5.24993683 0.14637719 SISS(ph)PSVSSETMDKPVDLSTR ddPTM_A459_MK2206_30min_R2 2 SISSPSVSSETMDKPVDLSTR 21 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.028)IS(0.131)S(0.519)PS(0.091)VS(0.115)S(0.115)ETMDKPVDLSTR;S(0.012)IS(0.145)S(0.446)PS(0.175)VS(0.096)S(0.096)ET(0.03)MDKPVDLSTR 90.978 0.00038307 27393300 85260 99179 78332 100115 79291 68376 86200 58243 69055 105898 TRUE FALSE 91787.57115 94253.91508 80943.54978 91935.28425 76177.63693 70978.09659 74881.83646 65855.56008 75061.27908 102442.5569 0.89599063 0.920066015 0.790135977 0.897432542 0.743613194 0.692857526 0.730964149 0.642853537 0.73271579 1 16.64445564 -6.273329886 17.97260856 0.734783834 0.872934062 0.253151921 0.095317449 20.19584276 30525.56323 0.027802746 0.03202078 5.33E-07 6.273329886 0.138150228 SISSPS(ph)VSSETMDKPVDLSTR ddPTM_A459_MK2206_30min_R1 1 SISSPSVSSETMDKPVDLSTR 21 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 SIS(0.008)S(0.031)PS(0.497)VS(0.167)S(0.167)ET(0.13)MDKPVDLSTR 70.944 0.010787 7566000 3112.2 2549.4 2678.9 1965.2 2916.1 2622.8 2716.2 2158.6 2330.3 2618.5 TRUE FALSE 2847.491047 2383.433597 2497.063732 2116.560045 2799.945562 2771.300669 2535.007254 2139.727588 2572.543024 2942.899549 0.967580103 0.80989295 0.848504575 0.719209069 0.951424103 0.941690541 0.861397819 0.727081422 0.874152509 1 11.52302258 -4.748218327 24.67991734 0.851542705 0.967580433 0.117204248 0.086889333 1191.604817 2224230.597 0.021629618 0.398445792 1.79E-05 4.748218327 0.116037728 SISSPS(ph)VSSETMDKPVDLSTR ddPTM_A459_MK2206_30min_R2 1 SISSPSVSSETMDKPVDLSTR 21 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.004)IS(0.074)S(0.285)PS(0.569)VS(0.025)S(0.041)ET(0.003)MDKPVDLSTR 105.2 8.17E-05 18204000 42588 46032 40936 50595 42219 35056 44828 31455 34054 43426 TRUE FALSE 45848.57002 43746.11782 42300.78581 46461.22665 40561.26993 36390.08064 38942.02975 35566.2765 37015.95536 42009.01318 1.091398406 1.04135076 1.006945477 1.105982339 0.965537318 0.866244596 0.926992253 0.84663442 0.881143178 1 15.35841128 -6.498153983 4.4178072 0.896893145 1.055361635 0.713864401 0.046703495 0.105861164 4.948933074 0.014626434 0.015836336 3.18E-07 6.498153983 0.15846849 SISSPSVSS(ph)ETMDKPVDLSTR ddPTM_A459_MK2206_30min_R2 1 SISSPSVSSETMDKPVDLSTR 21 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.002)IS(0.029)S(0.105)PS(0.065)VS(0.058)S(0.711)ET(0.03)MDKPVDLSTR 98.887 0.00017414 11889000 27781 29139 27521 33885 31150 22707 34183 22749 20900 27163 TRUE FALSE 29907.93472 27691.99963 28438.5364 31116.48711 29926.89448 23571.1308 29694.73104 25722.37241 22717.84422 26276.67353 1.138193336 1.053862453 1.08227308 1.184186692 1.13891488 0.89703633 1.130079536 0.978905202 0.864563172 1 14.68149503 -6.743519941 24.99981957 0.982546082 1.117367449 0.492995811 0.073446066 234.5084134 327167.3618 0.024825249 0.024775379 1.81E-07 6.743519941 0.134821368 SISSS(ph)NPDLAVAPGSVDDEVSR ddPTM_A459_MK2206_30min_R1 2 SISSSNPDLAVAPGSVDDEVSR 22 0 K7ESB7;K7EKT0;K7EP20;Q96HP0 K7ESB7;Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 SISS(0.002)S(0.998)NPDLAVAPGSVDDEVSR;SIS(0.014)S(0.088)S(0.897)NPDLAVAPGSVDDEVSR 375.04 1.68E-253 35411000 2583.21 2262.07 2203.72 1977.59 3102.2 2507.71 2634.24 1981.89 2229.53 1917.02 TRUE FALSE 2363.494425 2114.808832 2054.137626 2129.904324 2978.632805 2649.694373 2458.514656 1964.562545 2461.297622 2154.51491 1.096996086 0.981570757 0.953410727 0.988577203 1.382507399 1.229833389 1.141098929 0.911835205 1.142390619 1 11.07314737 -4.433442262 15.49776428 1.084691674 1.396026306 0.000611099 0.137996345 10404129.81 25859832.93 0.037495391 109432883 3.69E-05 4.433442262 0.311334631 SISSS(ph)NPDLAVAPGSVDDEVSR ddPTM_A459_MK2206_30min_R2 3 SISSSNPDLAVAPGSVDDEVSR 22 0 K7ESB7;K7EKT0;K7EP20;Q96HP0 K7ESB7;Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 SIS(0.011)S(0.048)S(0.941)NPDLAVAPGSVDDEVSR;SIS(0.001)S(0.004)S(0.995)NPDLAVAPGSVDDEVSR;SISS(0.031)S(0.969)NPDLAVAPGSVDDEVSR 279.1 3.07E-78 33403000 52185.4 67322.8 63539 62477.5 71109.3 73149.5 72896.1 54740 56450.9 63915.6 TRUE FALSE 56180.75435 63979.64765 65657.35855 57372.88839 68317.19159 75933.25548 63324.75451 61894.70595 61360.89724 61830.03921 0.908632035 1.034766409 1.061900646 0.927912858 1.104919105 1.228096512 1.024174581 1.001045879 0.992412394 1 15.9160203 -4.76272488 4.538789575 1.046834559 0.897387588 0.213462698 0.076397759 0.337661627 15.55842851 0.020493968 0.164964936 1.73E-05 4.76272488 -0.149446971 SIT(ph)SPTTLYDR ddPTM_A459_MK2206_30min_R2 1 SITSPTTLYDR 11 0 Q08999;F5H837 Q08999 RBL2 Retinoblastoma-like protein 2 1 SIT(0.924)S(0.042)PT(0.009)T(0.025)LYDR 170.4 0.00085451 21671000 56544 55347 47918 63082 60214 63726 54441 45848 51790 44901 TRUE FALSE 60873.05211 52598.54846 49515.5622 57927.99881 57849.69581 66151.13758 47292.8313 51840.49102 56294.60059 43435.88405 1.401446142 1.210946884 1.139969021 1.333643831 1.331841105 1.522960544 1.088796334 1.193494553 1.29603902 1 15.40659978 -9.505138838 0.533760938 0.977296118 1.293513514 0.333429559 0.120692591 5.233650119 1.833023537 0.394634965 0.059011478 3.13E-10 9.505138838 0.316217396 SITS(ph)PTTLYDR ddPTM_A459_MK2206_30min_R1 2 SITSPTTLYDR 11 0 Q08999;F5H837 Q08999 RBL2 Retinoblastoma-like protein 2 1 SIT(0.002)S(0.791)PT(0.16)T(0.047)LYDR;SIT(0.068)S(0.844)PT(0.068)T(0.02)LYDR 177.04 6.70E-05 43460000 6892 6119.7 6839.2 5046 6593.7 6756.5 6732.4 5763.7 5815.4 5593.7 TRUE FALSE 6305.799209 5721.306418 6374.974159 5434.643794 6331.058967 7139.047191 6283.29388 5713.308579 6419.931641 6286.689786 1.003039664 0.910066603 1.014043062 0.864468262 1.007057638 1.135581273 0.999459826 0.908794417 1.021194279 1 12.61808486 -6.48485505 24.98533667 1.013665721 0.948155508 0.190196983 0.064895601 984.0715899 646633.1879 0.020847731 0.023632989 3.27E-07 6.48485505 -0.065510213 SITS(ph)PTTLYDR ddPTM_A459_MK2206_30min_R2 3 SITSPTTLYDR 11 0 Q08999;F5H837 Q08999 RBL2 Retinoblastoma-like protein 2 1 SIT(0.052)S(0.941)PT(0.004)T(0.004)LYDR;SIT(0.001)S(0.594)PT(0.092)T(0.313)LYDR;S(0.001)IT(0.013)S(0.754)PT(0.035)T(0.197)LYDR 184.44 2.51E-05 34355300 134103 143683 128926 146839 142133 150917 161270 120198 131932 146844 TRUE FALSE 144370.0288 136547.9112 133224.3285 134841.784 136552.1443 156660.2522 140095.0553 135908.2913 143407.2069 142052.4923 1.016314649 0.961249669 0.937852806 0.949239128 0.961279468 1.102833535 0.986220326 0.956746968 1.009536718 1 17.11606462 SITS(ph)TPLSGK ddPTM_A459_MK2206_30min_R1 1 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 S(0.004)IT(0.012)S(0.492)T(0.492)PLSGK 111.5 0.008813 22308000 5990.6 6654.8 6191.2 6268.8 6371.8 5174.5 5864.2 5382.8 5401.7 4864 TRUE FALSE 5481.068012 6221.57131 5770.958594 6751.624062 6117.997713 5467.475718 5473.009918 5335.738747 5963.226045 5466.589041 1.00264863 1.138108474 1.055678148 1.23507072 1.119161815 1.000162199 1.001174567 0.976063631 1.090849522 1 12.41642521 -6.758879782 24.96337135 1.011374239 1.115603387 0.371571405 0.062500941 68.98161918 672766.9702 0.021052408 0.020131414 1.74E-07 6.758879782 0.104229148 SITS(ph)TPLSGK ddPTM_A459_MK2206_30min_R2 2 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 S(0.001)IT(0.178)S(0.801)T(0.021)PLSGK;S(0.001)IT(0.021)S(0.906)T(0.073)PLSGK 171.67 0.00016771 94423000 1052260 1414730 1313030 1432560 1201400 1132210 1224330 1026090 1065480 970160 TRUE FALSE 1132821.835 1344476.565 1356805.765 1315515.265 1154226.999 1175297.045 1063574 1160203.486 1158153.524 938503.7587 1.20705093 1.432574513 1.445711594 1.4017155 1.229858686 1.252309364 1.133265574 1.236226787 1.2340425 1 19.840003 -6.462720316 2.24842567 1.181245984 1.38160496 0.510830144 0.091979741 0.262713234 2.636330676 0.032023097 0.035845963 3.45E-07 6.462720316 0.200358975 SITST(ph)PLSGK ddPTM_A459_MK2206_30min_R1 1 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 S(0.002)IT(0.089)S(0.308)T(0.6)PLSGK 179.94 0.00027112 23489000 5389.2 5485.8 5405.3 5189.7 5617.7 4779.5 4839.4 4870.2 4050.2 3706.5 TRUE FALSE 4930.82024 5128.673423 5038.403296 5589.411593 5393.935113 5050.11116 4516.572456 4827.620355 4471.232784 4165.689203 1.183674537 1.231170443 1.209500529 1.341773551 1.294848187 1.212311076 1.084231741 1.158900753 1.073347666 1 12.02433949 -7.165400571 3.535662629 1.091291349 1.253770104 0.6875877 0.055130713 0.160163665 3.749263278 0.023506206 0.017543594 6.83E-08 7.165400571 0.162478755 SITSTPLS(ph)GK ddPTM_A459_MK2206_30min_R1 1 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 SIT(0.001)S(0.002)T(0.181)PLS(0.816)GK 84.169 0.038337 13529000 2765.7 2841.8 3537.1 3254.3 2563.5 2418.1 2874.6 2479.1 2948.1 2513.5 TRUE FALSE 2530.462692 2656.798303 3297.011507 3504.94675 2461.390367 2555.010732 2682.840679 2457.42549 3254.565545 2824.891356 0.895773456 0.940495746 1.167128605 1.240736831 0.871322135 0.904463362 0.949714641 0.869918585 1.152102908 1 11.46397967 -6.318675369 24.99996902 0.948333109 1.060004346 0.148094439 0.119829735 538.3179469 235128.868 0.03923765 0.04449132 4.80E-07 6.318675369 0.111671236 SITSTPLS(ph)GK ddPTM_A459_MK2206_30min_R2 2 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 SITST(0.012)PLS(0.988)GK;SITST(0.001)PLS(0.999)GK 132.59 0.0024151 18294100 130377 169221 176024 165542 168695 135230 191179 138073 128716 142680 TRUE FALSE 140358.7634 160817.7312 181892.5523 152016.6891 162071.1867 140376.2724 166076.9677 156119.6152 139911.485 138024.3633 1.016912957 1.165140178 1.317829316 1.101375768 1.174221585 1.017039811 1.20324386 1.131101868 1.013672381 1 17.07456342 -8.25758901 4.263009514 1.00169642 1.146118997 0.293584357 0.08324346 0.252620493 11.25107922 0.071543973 0.021527808 5.53E-09 8.25758901 0.144422577 SIVPSS(ph)PQPQR ddPTM_A459_MK2206_30min_R1 1 SIVPSSPQPQR 11 0 H7C5K2;H7C5C6;H7C5A5;A0A1X7SBY3;H0Y860;Q9P246-3;Q9P246;Q9P246-2 H7C5K2 STIM2 Stromal interaction molecule 2 1 SIVPS(0.054)S(0.946)PQPQR 88.948 0.029927 14979000 2137.8 2185.2 1613.2 1824.4 2469.3 2089.3 2406.1 2259.4 2295.3 2298.9 TRUE FALSE 1955.968884 2042.943083 1503.700479 1964.915604 2370.942552 2207.59436 2245.593459 2239.646304 2533.904649 2583.705088 0.757040304 0.790702891 0.581993853 0.760503052 0.917652159 0.854429699 0.869136911 0.866835118 0.980725184 1 11.33522569 -6.167999057 4.327977262 0.902871253 0.711967255 0.65853106 0.06798775 0.149700549 4.91965969 0.020582073 0.026913011 6.79E-07 6.167999057 -0.190903998 SIYDDIS(ph)SPGLGSTPLTSR ddPTM_A459_MK2206_30min_R1 1 SIYDDISSPGLGSTPLTSR 19 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 SIYDDIS(0.908)S(0.092)PGLGSTPLTSR 180.1 5.17E-13 7315200 3408 2696.2 2823.8 2569.6 2631.1 2836.2 3542.7 2523.2 2476.2 2359.2 TRUE FALSE 3118.131704 2520.67689 2632.128324 2767.511037 2526.297716 2996.783193 3306.372947 2501.139928 2733.609851 2651.475507 1.175998683 0.950669498 0.992703239 1.043762626 0.952789384 1.130232274 1.246993585 0.943301163 1.030976844 1 11.37257971 -3.881160838 15.10351068 1.046187054 1.046598149 0 0.098945008 0 0 0.022974555 0 0.000131474 3.881160838 0.000411095 SIYDDIS(ph)SPGLGSTPLTSR ddPTM_A459_MK2206_30min_R2 2 SIYDDISSPGLGSTPLTSR 19 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 SIYDDIS(0.5)S(0.5)PGLGSTPLTSR;SIYDDIS(0.448)S(0.448)PGLGS(0.003)T(0.015)PLT(0.058)S(0.028)R 145.82 4.91E-05 2988200 47298.5 53218 44311 50407 51719 51093.2 53026 40916.2 43229.2 50946.2 TRUE FALSE 50919.70953 50575.27151 45788.30662 46288.58686 49688.25219 53037.58753 46063.6225 46264.08783 46989.19768 49283.82967 1.033193035 1.02620417 0.929073632 0.939224634 1.008205988 1.076166115 0.934659965 0.938727533 0.953440469 1 15.58882675 SIYDDISS(ph)PGLGSTPLTSR ddPTM_A459_MK2206_30min_R1 1 SIYDDISSPGLGSTPLTSR 19 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 SIYDDIS(0.095)S(0.905)PGLGSTPLTSR 238.05 1.12E-29 7203300 1739.2 1329.3 1318.6 1272.1 1359.8 1151.8 1276.9 1087.5 1026.1 1045.9 TRUE FALSE 1591.271907 1242.762328 1229.097106 1370.077362 1305.636287 1217.013921 1191.720331 1077.992102 1132.766767 1175.473988 1.353727878 1.057243581 1.045618294 1.16555311 1.110731756 1.035338879 1.013821099 0.917070146 0.963668085 1 10.1990269 -1.522878745 0.309642394 0.967393328 3.6683524 0.631585796 0.070748249 41.0084995 0.585479974 0.074883603 62.01941318 0.03 1.522878745 2.700959072 SIYDDISS(ph)PGLGSTPLTSR ddPTM_A459_MK2206_30min_R2 1 SIYDDISSPGLGSTPLTSR 19 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 SIYDDIS(0.045)S(0.954)PGLGSTPLTSR 157.54 2.80E-06 3027100 17443 21576 16903 19307 20248 22166 21150 15074 18062 21904 TRUE FALSE 18778.44949 20504.56721 17466.53758 17729.55634 19452.96178 23009.54266 18372.97959 17044.22356 19633.00011 21189.27427 0.886224287 0.967686149 0.824310326 0.836723151 0.91805701 1.085905178 0.867088667 0.80437977 0.926553683 1 14.37104656 -4.444541879 14.49405003 0.908308478 0.584838337 0.005411824 0.08281422 11121225.48 44897691.02 0.021449347 109427417.8 3.59E-05 4.444541879 -0.323470141 SIYDDISSPGLGST(ph)PLTSR ddPTM_A459_MK2206_30min_R1 2 SIYDDISSPGLGSTPLTSR 19 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 SIYDDISSPGLGS(0.047)T(0.928)PLT(0.003)S(0.022)R;SIYDDISSPGLGS(0.048)T(0.951)PLT(0.001)S(0.001)R 266.99 3.93E-58 28736000 4032.3 3727.4 3295.6 3188.1 3889.8 3761 4532.7 3842.2 3088 3108.4 TRUE FALSE 3689.331711 3484.745583 3071.903854 3433.648014 3734.861029 3973.94457 4230.331853 3808.60805 3409.008651 3493.492059 1.056058422 0.997496351 0.879321837 0.982869849 1.069091032 1.137527867 1.210917839 1.090200861 0.975816917 1 11.77045415 -6.311461131 3.867600589 1.096661796 0.97225888 0.301029245 0.07428867 0.264144483 8.270720106 0.024921091 0.029402729 4.88E-07 6.311461131 -0.124402917 SIYDDISSPGLGST(ph)PLTSR ddPTM_A459_MK2206_30min_R2 2 SIYDDISSPGLGSTPLTSR 19 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 SIYDDISSPGLGS(0.207)T(0.793)PLTSR;SIYDDIS(0.009)S(0.007)PGLGS(0.093)T(0.891)PLTSR 238.45 2.50E-29 14486000 54723 49552 48449 52662 50347 62836 59537 35532 49781 52334 TRUE FALSE 58912.63495 47091.31974 50064.26548 48359.34614 48370.12381 65227.26801 51719.72038 40176.1544 54110.8614 50626.34587 1.163675433 0.93017418 0.988897473 0.955220949 0.955433835 1.28840561 1.021596947 0.793581952 1.068828107 1 15.62760074 -7.547741046 24.99421198 0.940240885 1.041048027 0.100436757 0.121468798 509.4541345 512150.8208 0.057785547 0.033364168 2.83E-08 7.547741046 0.100807142 SIYFSS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SIYFSSPK 8 0 A2IDA3;P29372-5;P29372-4;P29372-2;P29372 A2IDA3 MPG DNA-3-methyladenine glycosylase 1 SIYFS(0.013)S(0.987)PK;SIYFS(0.043)S(0.957)PK 101.65 0.016864 14054000 189638 156874 158302 144649 150784 107645 194447 112480 113699 153444 TRUE FALSE 204156.8311 149083.8653 163579.7097 132830.714 144863.4625 111741.5059 168915.8753 127181.5222 123588.3335 148437.1348 1.375375719 1.004356932 1.102013387 0.894861748 0.975924675 0.752786734 1.137962381 0.856803942 0.832597137 1 17.17949253 -1.522878745 0.824764076 0.921970405 130.5019235 0.58264989 0.11023982 397.9227494 1.240284031 0.037090896 96554.76968 0.03 1.522878745 129.5799531 SIYGEKFEDENFILK ddPTM_A459_MK2206_30min_R1 2 SIYGEKFEDENFILK 15 1 P62937;F8WE65;C9J5S7;P62937-2 P62937 PPIA "Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase" 0 ; 164.92 0.00025498 85688000 8308 7897.6 10578.2 11296.9 9893 8395 8292.1 8293.3 5588.5 5105.6 FALSE TRUE 7601.360973 7383.464805 9860.181257 12166.9892 9498.940861 8870.317645 7738.949139 8220.792552 6169.444574 5738.120273 1.32471273 1.28673929 1.71836434 2.120378907 1.655409857 1.545857741 1.348690646 1.432662991 1.075168222 1 12.48636249 -8.006374323 1.056446113 0.99790165 1.623125902 0.483296593 0.223727352 0.495125457 1.022579786 0.232126619 0.083882683 9.85E-09 8.006374323 0.625224252 SIYYITGESK ddPTM_A459_MK2206_30min_R1 1 SIYYITGESK 10 0 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 159.4 0.006362 12838000 3735.5 3593.8 3869.2 3806.7 3650.5 3553.1 3126.2 3467 2874.1 2782.3 FALSE TRUE 3417.776109 3359.842967 3606.569484 4099.892694 3505.092855 3754.273451 2917.656902 3436.688385 3172.87298 3126.992329 1.092991523 1.074464729 1.153366911 1.311129757 1.120915079 1.200602066 0.933055344 1.099039595 1.014672454 1 11.61055996 -7.249505659 24.99822243 1.019945145 1.160013033 0.498260382 0.07217918 696.3126993 1458606.718 0.028982281 0.022267921 5.63E-08 7.249505659 0.140067888 SIYYITGESK ddPTM_A459_MK2206_30min_R2 2 SIYYITGESK 10 0 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ; 151.83 0.0091011 8641600 83340 88498 91307 98451 89396 72986 90530 76946 80231 87803 FALSE TRUE 89720.57448 84103.31801 94351.12981 90407.23837 85885.86386 75763.53337 78643.30225 87003.1064 87209.34736 84937.9953 1.056306711 0.990173099 1.110823601 1.064391007 1.011159535 0.891986361 0.925890727 1.02431316 1.026741296 1 16.37412244 -6.522756304 24.99966424 0.970008021 1.052601914 0.39486142 0.047477128 4.866542898 993959.1237 0.016831978 0.017012199 3.00E-07 6.522756304 0.082593892 SKAFDFLSEETEASLASRREQK ddPTM_A459_MK2206_30min_R1 1 SKAFDFLSEETEASLASRREQK 22 3 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 0 45.696 0.046012 22709000 5612.9 5936.3 5004.5 4968.9 5028.9 4430.6 5138.5 4741.7 5000.2 4962.8 FALSE TRUE 5135.49338 5549.845791 4664.808483 5351.605539 4828.588264 4681.456743 4795.720041 4700.243817 5519.988683 5577.629131 0.920730522 0.99501879 0.836342534 0.959476762 0.865706226 0.839327362 0.859813359 0.842695652 0.98966578 1 12.44543629 -6.272848396 24.665325 0.886673077 0.926147655 0.021191486 0.065372427 1729.169817 3738310.414 0.019711516 0.022569442 5.34E-07 6.272848396 0.039474578 SKDDQVTVIGAGVTLHEALAAAELLK ddPTM_A459_MK2206_30min_R1 1 SKDDQVTVIGAGVTLHEALAAAELLK 26 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 109.5 1.85E-08 2115200 1807.4 2212.6 1819.2 1294.7 1479.8 1665.2 1715.3 1687.2 1827.4 1597.8 FALSE TRUE 1653.671139 2068.559338 1695.717773 1394.418018 1420.856432 1759.482185 1600.875467 1672.448988 2017.364769 1795.747527 0.920881758 1.151921028 0.944296315 0.776511173 0.791233963 0.979804877 0.891481371 0.9313386 1.12341225 1 10.81036881 -9.620800696 8.741050619 0.9999983 0.941153863 0.01845281 0.114761727 0 0 0.117994057 0.028617762 2.39E-10 9.620800696 -0.058844437 SKDHFGLEGDEESTMLEDSVS(ph)PK ddPTM_A459_MK2206_30min_R1 2 SKDHFGLEGDEESTMLEDSVSPK 23 1 Q9Y490 Q9Y490 TLN1 Talin-1 1 SKDHFGLEGDEEST(0.001)MLEDS(0.092)VS(0.906)PK;SKDHFGLEGDEES(0.001)T(0.002)MLEDS(0.198)VS(0.799)PK 53.097 0.01155 15982400 6918.3 5399.3 7061.7 5671.3 6364.2 5294.6 6403.4 6572.8 5553 5331.3 TRUE FALSE 6329.862256 5047.804589 6582.371479 6108.104509 6110.700438 5594.375676 5976.24087 6515.334703 6130.254222 5991.781693 1.056424045 0.84245469 1.098566639 1.019413727 1.019846975 0.933674817 0.99740631 1.087378519 1.023110409 1 12.54876935 -7.56344953 23.76353814 1.041625346 0.992604399 0.069455727 0.068518828 226.4855072 132655.6525 0.031511478 0.018193201 2.73E-08 7.56344953 -0.049020948 SKDHFGLEGDEESTMLEDSVS(ph)PK ddPTM_A459_MK2206_30min_R2 4 SKDHFGLEGDEESTMLEDSVSPK 23 1 Q9Y490 Q9Y490 TLN1 Talin-1 1 SKDHFGLEGDEESTMLEDS(0.25)VS(0.75)PK;SKDHFGLEGDEESTMLEDS(0.293)VS(0.707)PK;SKDHFGLEGDEESTMLEDS(0.009)VS(0.991)PK;SKDHFGLEGDEESTMLEDS(0.112)VS(0.888)PK 139.67 5.95E-06 36532900 149760.3 235323 209379 223911 288434 208612 309337 202506 210253 251140 TRUE FALSE 161226.0637 223637.202 216359.5914 205616.755 277108.6319 216550.8758 268720.6803 228974.2295 228540.4259 242945.3224 0.663631068 0.920524832 0.890569076 0.846349924 1.140621392 0.891356433 1.106095304 0.942492851 0.940707249 1 17.89027213 -4.023924304 0.766841425 0.990346862 3.54E-16 0.530626561 0.087051892 5.9767718 1.156278715 0.031735145 6.661123682 9.46E-05 4.023924304 -0.990346862 SKDIVLVAYS(ph)ALGSQR ddPTM_A459_MK2206_30min_R1 1 SKDIVLVAYSALGSQR 16 1 A0A0A0MSS8;P42330;S4R3Z2;P42330-2 A0A0A0MSS8;P42330-2 AKR1C3 Aldo-keto reductase family 1 member C3 1 SKDIVLVAYS(0.996)ALGS(0.004)QR 103.24 0.0024798 10996000 5460.8 6240.1 5608.3 5119.8 7180 5901.9 5491.8 5006.3 4499.8 4280.1 TRUE FALSE 4996.330284 5833.868356 5227.624222 5514.127883 6894.005396 6236.060478 5125.452042 4962.530447 4967.570313 4810.351101 1.038662289 1.212773919 1.086744837 1.14630466 1.433160543 1.296383642 1.06550477 1.031635808 1.032683521 1 12.23192648 -7.423346807 5.789604746 1.028512389 1.2050719 0.397951843 0.10320991 0.266436052 12.68110028 0.048422734 0.032108451 3.77E-08 7.423346807 0.176559511 SKDYDVYS(ph)DNDICSQESEDNFAK ddPTM_A459_MK2206_30min_R1 4 SKDYDVYSDNDICSQESEDNFAK 23 1 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 SKDYDVY(0.008)S(0.992)DNDICSQESEDNFAK;SKDYDVY(0.008)S(0.992)DNDICSQESEDNFAK;SKDYDVY(0.008)S(0.99)DNDICS(0.001)QESEDNFAK;S(0.003)KDY(0.007)DVY(0.198)S(0.785)DNDICS(0.007)QESEDNFAK 136.2 2.83E-06 72854000 15553.9 16408.8 15383 16074.7 15848.7 13411.7 15136.1 15402.7 14670.9 15096.7 TRUE FALSE 14230.95913 15340.58414 14338.84482 17312.77618 15217.41272 14171.05886 14126.39839 15268.03582 16195.99256 16966.99317 0.838743729 0.904142766 0.845102292 1.020379746 0.896883294 0.83521333 0.832581132 0.899866916 0.954558795 1 14.0504433 -8.400214044 2.597496973 0.997822473 0.884521144 0.349613223 0.052839239 0.317069035 4.220284372 0.052869681 0.01448264 3.98E-09 8.400214044 -0.113301329 SKDYDVYS(ph)DNDICSQESEDNFAK ddPTM_A459_MK2206_30min_R2 4 SKDYDVYSDNDICSQESEDNFAK 23 1 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 SKDY(0.009)DVY(0.212)S(0.778)DNDICS(0.001)QESEDNFAK;SKDY(0.003)DVY(0.165)S(0.782)DNDICS(0.049)QES(0.001)EDNFAK;S(0.004)KDY(0.013)DVY(0.133)S(0.831)DNDICS(0.02)QESEDNFAK;SKDYDVY(0.043)S(0.905)DNDICS(0.051)QES(0.001)EDNFAK 90.592 9.10E-05 58045500 297456 312166 308797 315331 343151 247140 382213 297075 273831 339195 TRUE FALSE 320229.4601 296664.2904 319092.1379 289567.4486 329677.1675 256545.0859 332027.974 335903.7225 297648.3254 328127.0949 0.975931171 0.90411397 0.972465069 0.882485638 1.004724001 0.781846699 1.011888317 1.023700047 0.907112914 1 18.3238952 SKEFVS(ph)SDESSSGENK ddPTM_A459_MK2206_30min_R1 1 SKEFVSSDESSSGENK 16 1 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 SKEFVS(0.676)S(0.235)DES(0.082)S(0.007)S(0.001)GENK 186.75 3.93E-06 4828600 1649.1 2057.5 2101.4 1670.9 1571.6 1353.1 1490.7 1693.6 1273.3 1451.7 TRUE FALSE 1508.835385 1923.556376 1958.762823 1799.593008 1508.999844 1429.711353 1391.258123 1678.793034 1405.664092 1631.547556 0.924787868 1.178976591 1.200555151 1.102997581 0.924888667 0.87629156 0.852722998 1.028957463 0.861552632 1 10.67202532 -6.255352024 5.639366126 0.918962277 1.115479185 0.497525679 0.087085151 0.131823253 16.35327079 0.026461362 0.032484054 5.55E-07 6.255352024 0.196516907 SKEFVS(ph)SDESSSGENK ddPTM_A459_MK2206_30min_R2 4 SKEFVSSDESSSGENK 16 1 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 S(0.03)KEFVS(0.76)S(0.198)DES(0.011)SSGENK;S(0.004)KEFVS(0.493)S(0.493)DES(0.01)SSGENK;S(0.004)KEFVS(0.495)S(0.495)DES(0.003)S(0.001)S(0.001)GENK;S(0.015)KEFVS(0.779)S(0.189)DES(0.011)S(0.004)S(0.002)GENK 99.881 0.018466 29422800 106572 127709 127563 118752 138617 99729 150079 119741 105131 159034 TRUE FALSE 114731.2343 121367.1568 131815.8868 109049.5817 133174.2001 103524.257 130373.447 135391.5598 114275.1043 153844.7336 0.745759907 0.788893802 0.856811174 0.708828825 0.865640292 0.672913882 0.847435229 0.880053263 0.742795035 1 17.23111553 -14.52287875 0.274028282 2.462678096 0.778570812 0.462519146 0.067910487 190.9233027 1.842309587 158.2908108 0.077431576 3.00E-15 14.52287875 -1.684107284 SKEFVSSDES(ph)SSGENK ddPTM_A459_MK2206_30min_R1 1 SKEFVSSDESSSGENK 16 1 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 SKEFVS(0.075)S(0.156)DES(0.721)S(0.045)S(0.003)GENK 167.29 4.86E-05 0 748 850.65 638.85 632.79 754.31 478.21 579.03 831.05 573.16 558.37 TRUE FALSE 684.3786721 795.2725304 595.4866419 681.5275954 724.2642354 505.2858369 540.4039652 823.7842175 632.7420331 627.5450911 1.090564936 1.267275518 0.948914509 1.086021714 1.15412302 0.805178535 0.861139658 1.312709205 1.008281384 1 9.293575315 -5.263861454 24.88672082 1.026724151 1.178920224 0.163363227 0.141688671 363.892667 3739030.104 0.038175876 0.085821483 5.45E-06 5.263861454 0.152196073 SKEFVSSDES(ph)SSGENK ddPTM_A459_MK2206_30min_R2 1 SKEFVSSDESSSGENK 16 1 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 S(0.001)KEFVS(0.011)S(0.011)DES(0.853)S(0.092)S(0.031)GENK 87.228 0.0081914 9715900 26411 30662 32596 32263 32488 24170 40658 35347 28942 41526 TRUE FALSE 28433.04647 29139.36967 33682.73437 29627.0097 31212.35788 25089.80629 35319.55576 39966.97426 31459.32284 40171.01002 0.707800139 0.725383047 0.838483632 0.73752215 0.776987132 0.624574943 0.879229966 0.994920821 0.783134973 1 15.29386712 -7.454531925 7.797030082 0.920828899 0.741789959 0.580997034 0.075168056 0.216718307 22.45158815 0.030532396 0.02043159 3.51E-08 7.454531925 -0.17903894 SKEFVSSDESS(ph)SGENK ddPTM_A459_MK2206_30min_R1 1 SKEFVSSDESSSGENK 16 1 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 SKEFVS(0.015)S(0.026)DES(0.31)S(0.57)S(0.078)GENK 100.55 0.028249 6070400 779 1288 1183.1 1095.6 822.19 760.14 1039.9 779.19 830.6 899.15 TRUE FALSE 712.7419593 1204.150966 1102.794468 1179.983302 789.4404313 803.1784699 970.5301684 772.377624 916.9438423 1010.54349 0.705305577 1.191587475 1.091288479 1.167671964 0.781203816 0.794798519 0.960404157 0.764319034 0.907376923 1 9.980915696 -6.268263348 24.99529767 0.857191452 1.053602604 0.249165218 0.143750033 669.3916162 2451889.327 0.042998837 0.049831354 5.39E-07 6.268263348 0.196411152 SKEPHELVGS(ph)SPHR ddPTM_A459_MK2206_30min_R2 2 SKEPHELVGSSPHR 14 1 Q3T8J9-3;Q3T8J9 Q3T8J9-3 GON4L GON-4-like protein 1 S(0.003)KEPHELVGS(0.745)S(0.252)PHR;SKEPHELVGS(0.5)S(0.5)PHR 70.784 0.024245 6845600 78066 91576 80413 112907 106377 111099 116981 87775 102208 99892 TRUE FALSE 84042.79298 87028.469 83093.92929 103682.1369 102200.1045 115326.9503 101621.2542 99247.49388 111097.8671 96632.53222 0.869715313 0.900612527 0.859896014 1.072952706 1.05761592 1.193458845 1.051625698 1.027060883 1.149694254 1 16.56022135 -5.766842167 23.10588103 1.082791177 0.879128357 0.745212544 0.054134587 23.5633406 100774.3362 0.014933947 0.022949569 1.71E-06 5.766842167 -0.203662819 SKESVPEFPLS(ph)PPK ddPTM_A459_MK2206_30min_R1 4 SKESVPEFPLSPPK 14 1 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK 170.48 0.00020806 3067840000 34857.6 83870.6 43928.8 44743.7 25701.5 25153.6 31069.7 30617.8 38736.6 38270 TRUE FALSE 31892.77808 78410.6087 40947.03545 48189.86753 24677.75483 26577.77509 28997.097 30350.1118 42763.40819 43011.17652 0.741499783 1.823028688 0.952009193 1.120403379 0.573752146 0.617927182 0.674175862 0.705633146 0.994239443 1 15.39242397 -5.93370994 2.138592278 0.739439948 1.260403455 0.285886568 0.294914574 0.330775342 3.065019063 0.087725684 0.144974102 1.16E-06 5.93370994 0.520963507 SKESVPEFPLS(ph)PPK ddPTM_A459_MK2206_30min_R2 4 SKESVPEFPLSPPK 14 1 A2A2D0;P16949;P16949-2 A2A2D0 STMN1 Stathmin 1 SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK 164.93 0.00020399 1760937800 344350.5 477133.8 322631 328686.9 343816.8 218457 408085.6 298844.7 282657.4 416692.4 TRUE FALSE 370714.239 453440.0293 333387.3565 301832.1289 330316.8249 226770.5342 354503.4705 337904.7284 307242.4297 403095.7611 0.919667917 1.124894065 0.827067384 0.748785172 0.819450009 0.562572361 0.879452241 0.83827408 0.762207047 1 18.62076309 -5.389351344 5.829690274 0.788915912 1.020209724 0.363656647 0.114470912 0.207782389 8.881862886 0.028959997 0.061375374 4.08E-06 5.389351344 0.231293812 SKETSSPGTDDVFTPAPS(ph)DSPSSQR ddPTM_A459_MK2206_30min_R1 1 SKETSSPGTDDVFTPAPSDSPSSQR 25 1 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 SKETSSPGTDDVFT(0.001)PAPS(0.584)DS(0.351)PS(0.048)S(0.017)QR 139.57 1.51E-09 0 1205 1148.4 1017.5 910.42 1317.8 1421.1 1608.9 1383.6 1444.2 1048.1 TRUE FALSE 1102.508422 1073.638951 948.4349349 980.5407061 1265.309236 1501.561454 1501.573217 1371.503331 1594.329758 1177.946541 0.935957944 0.911449641 0.805159574 0.832415286 1.074165246 1.274728014 1.274737999 1.164317126 1.35348227 1 10.20205835 -6.475489996 3.389965251 1.226160737 0.870813887 0.743665302 0.09433371 0.11515479 2.667560517 0.030255907 0.033190676 3.35E-07 6.475489996 -0.355346851 SKETSSPGTDDVFTPAPSDS(ph)PSSQR ddPTM_A459_MK2206_30min_R1 2 SKETSSPGTDDVFTPAPSDSPSSQR 25 1 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 SKETSSPGTDDVFTPAPS(0.27)DS(0.573)PS(0.118)S(0.039)QR;SKETSSPGTDDVFT(0.003)PAPS(0.196)DS(0.531)PS(0.196)S(0.073)QR 145.1 2.86E-11 5832200 4097.8 3982.6 3402.9 3715.2 4898 4840.9 4567.4 4920.1 4990.7 3904.4 TRUE FALSE 3749.260592 3723.332016 3171.920629 4001.345348 4702.902288 5114.987575 4262.71708 4877.084084 5509.501124 4388.106549 0.85441421 0.84850538 0.722844943 0.911861484 1.071738399 1.165647989 0.971425154 1.111432466 1.255553178 1 12.09938284 -6.158562745 3.016132883 1.100979335 0.812735522 0.716472466 0.082336657 0.14183406 2.48340612 0.02582817 0.034538026 6.94E-07 6.158562745 -0.288243813 SKETSSPGTDDVFTPAPSDS(ph)PSSQR ddPTM_A459_MK2206_30min_R2 2 SKETSSPGTDDVFTPAPSDSPSSQR 25 1 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 SKETSSPGTDDVFTPAPS(0.022)DS(0.762)PS(0.175)S(0.041)QR;SKETSSPGTDDVFTPAPS(0.217)DS(0.633)PS(0.124)S(0.025)QR 167.17 2.72E-16 21318000 113272 86632 91414 105075 91993 129887 162261 82327 160495 127053 TRUE FALSE 121944.1914 82329.98085 94461.69713 96490.03638 88380.89259 134829.9408 140955.9358 93087.42157 174454.565 122907.271 0.992164177 0.669854437 0.768560691 0.785063695 0.719085957 1.097005406 1.14684782 0.757379289 1.419399874 1 16.90721074 -6.765735092 24.99500068 1.072882811 0.779314748 0.429503157 0.170892911 104.6670835 609010.6504 0.055826572 0.05095824 1.72E-07 6.765735092 -0.293568064 SKFDS(ph)DEEEEDTENVEAASSGK ddPTM_A459_MK2206_30min_R2 1 SKFDSDEEEEDTENVEAASSGK 22 1 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.282)KFDS(0.714)DEEEEDT(0.003)ENVEAASSGK 62.823 0.0055913 4597400 23444 19072 21049 17617 19569 15208 32109 24180 28179 41043 TRUE FALSE 25238.89067 18124.91221 21750.76315 16177.63475 18800.62273 15786.7511 27893.04973 27340.40902 30629.95848 39703.77027 0.635679949 0.456503553 0.547826139 0.407458401 0.473522353 0.3976134 0.702528993 0.688609894 0.771462213 1 15.27698839 -8.186814255 0.881086876 0.983466849 0.485285283 0.794870042 0.081740321 0.238440049 0.381512915 0.077638998 0.028973383 6.50E-09 8.186814255 -0.498181565 SKGDCQTLS(ph)EGSPGSSQSGSR ddPTM_A459_MK2206_30min_R2 1 SKGDCQTLSEGSPGSSQSGSR 21 1 O94972-2;O94972-3;O94972 O94972-2 TRIM37 E3 ubiquitin-protein ligase TRIM37 1 S(0.259)KGDCQT(0.001)LS(0.335)EGS(0.246)PGS(0.146)S(0.011)QS(0.002)GS(0.001)R 128.49 3.25E-05 3128600 10631 11509 11513 14104 13785 11307 15873 10872 12135 15251 TRUE FALSE 11444.91753 10937.4798 11896.83767 12951.65808 13243.73164 11737.29581 13788.85603 12293.00773 13190.48036 14753.36112 0.77574984 0.74135512 0.806381514 0.87787847 0.897675555 0.79556758 0.934624722 0.833234382 0.894066122 1 13.84875605 -1.52287875 0.074912485 1.127455718 0.169406175 0.660064944 0.043940092 142.2574231 0.785140823 1.633366818 14.22370718 0.03 1.52287875 -0.958049543 SKGDCQTLSEGSPGS(ph)SQSGSR ddPTM_A459_MK2206_30min_R2 1 SKGDCQTLSEGSPGSSQSGSR 21 1 O94972-2;O94972-3;O94972 O94972-2 TRIM37 E3 ubiquitin-protein ligase TRIM37 1 S(0.003)KGDCQTLS(0.001)EGS(0.139)PGS(0.43)S(0.269)QS(0.127)GS(0.03)R 86.248 0.00057368 3314300 11936 11086 12660 13051 13792 14661 17549 12680 12186 16537 TRUE FALSE 12849.82934 10535.48536 13082.07808 11984.69155 13250.45678 15218.93463 15244.79522 14337.31954 13245.91625 15997.39904 0.803244909 0.658574893 0.817762815 0.749165006 0.828288195 0.951338064 0.952954613 0.896228162 0.828004366 1 13.96554974 -6.531248782 3.280286867 0.920587346 0.755304763 0.653215769 0.05784177 0.156934248 3.529022158 0.019587748 0.02070831 2.94E-07 6.531248782 -0.165282583 SKGHYEVT(ph)GSDDETGKLQGSGVSLASK ddPTM_A459_MK2206_30min_R1 1 SKGHYEVTGSDDETGKLQGSGVSLASK 27 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.001)KGHY(0.107)EVT(0.635)GS(0.257)DDETGKLQGSGVSLASK 96.317 0.00017321 0 800.03 494.18 469.78 536.24 935.08 940.2 895.61 922.78 561.26 448.43 TRUE FALSE 731.9832474 462.0087922 437.8926425 577.5412977 897.8337835 993.4333115 835.865491 914.7122317 619.6049855 503.9848939 1.452391245 0.916711588 0.86886065 1.14594962 1.781469632 1.971156921 1.658512986 1.814959621 1.22941182 1 8.977236682 -6.179346782 5.491826241 1.639664388 1.057713603 0.356022618 0.308746521 0.211510622 10.75286411 0.090111091 0.11696385 6.62E-07 6.179346782 -0.581950784 SKGHYEVTGS(ph)DDETGK ddPTM_A459_MK2206_30min_R1 4 SKGHYEVTGSDDETGK 16 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 SKGHYEVT(0.001)GS(0.762)DDET(0.237)GK;SKGHYEVT(0.036)GS(0.754)DDET(0.21)GK;SKGHYEVTGS(0.968)DDET(0.032)GK;SKGHYEVTGS(0.996)DDET(0.003)GK 131.54 0.00038187 50149500 13742.6 10035.8 11459.8 8390.3 12165.4 12490.9 13886.2 12174.9 10026.6 8991.4 TRUE FALSE 12573.7197 9382.467596 10681.9407 9036.52236 11680.82636 13198.12396 12959.87693 12068.45613 11068.90095 10105.32251 1.244267037 0.928467902 1.05706084 0.894233939 1.155908319 1.306056679 1.282480289 1.19426729 1.095353556 1 13.30282775 -6.502099671 23.38429138 1.198510334 1.025484958 0.239982809 0.1200769 399.1235186 449164.6328 0.036542768 0.04091163 3.15E-07 6.502099671 -0.173025376 SKGHYEVTGS(ph)DDETGKLQGSGVSLASK ddPTM_A459_MK2206_30min_R1 2 SKGHYEVTGSDDETGKLQGSGVSLASK 27 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.004)KGHY(0.003)EVT(0.247)GS(0.434)DDET(0.247)GKLQGS(0.051)GVS(0.013)LAS(0.001)K;S(0.002)KGHY(0.001)EVT(0.03)GS(0.936)DDET(0.025)GKLQGS(0.004)GVS(0.002)LASK 56.416 0.0033476 148898000 6084.7 4563.6 5104 4185.4 6834.4 5578.6 6013.1 6480.7 3566.1 2816 TRUE FALSE 5567.164313 4266.508811 4757.554701 4507.760233 6562.171376 5894.455511 5611.977071 6424.039923 3936.808856 3164.86734 1.759051396 1.348084565 1.503239849 1.424312538 2.073442793 1.862465272 1.773210839 2.029797534 1.243909597 1 11.62792931 SKGHYEVTGSDDET(ph)GK ddPTM_A459_MK2206_30min_R2 1 SKGHYEVTGSDDETGK 16 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 SKGHYEVTGS(0.277)DDET(0.723)GK 213.36 4.43E-38 0 4219.5 7873 7179.9 9228.1 9685.5 7673.2 9926.2 6555.5 8911.7 8000.8 TRUE FALSE 4542.548164 7482.038268 7419.274282 8474.134711 9305.198604 7965.209003 8622.878016 7412.326358 9686.823557 7739.734551 0.586912656 0.966704765 0.958595445 1.094886996 1.202263274 1.029132065 1.114105136 0.957697749 1.251570515 1 12.91806837 -4.444741874 1.232591329 1.088240744 3.70E-15 0.73067509 0.089843023 1.483948716 1.124612927 0.02545413 2.512025689 3.59E-05 4.444741874 -1.088240744 SKGHYEVTGSDDET(ph)GKLQGSGVSLASK ddPTM_A459_MK2206_30min_R2 1 SKGHYEVTGSDDETGKLQGSGVSLASK 27 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.001)KGHYEVT(0.004)GS(0.1)DDET(0.888)GKLQGS(0.005)GVS(0.002)LASK 59.07 0.0078516 40261000 27918 74052 52736 82241 97601 70779 90520 61473 85066 61877 TRUE FALSE 30055.42355 70374.68536 54494.19192 75521.64722 93768.69433 73472.54444 78634.61527 69507.73217 92464.88692 59857.95856 0.502112405 1.175694712 0.910391755 1.26168097 1.566520085 1.227448216 1.313686887 1.161211205 1.544738396 1 15.86925546 -4.57209768 0.994353784 1.300618992 4.02E-13 0.55880379 0.196183548 2.066884507 1.246756612 0.06224232 3.174244697 2.68E-05 4.57209768 -1.300618992 SKGHYEVTGSDDETGKLQGS(ph)GVSLASK ddPTM_A459_MK2206_30min_R2 1 SKGHYEVTGSDDETGKLQGSGVSLASK 27 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.001)KGHY(0.007)EVT(0.084)GS(0.108)DDET(0.358)GKLQGS(0.41)GVS(0.03)LAS(0.003)K 40.285 0.039302 26778000 23419 69410 51166 85582 102290 74168 110490 49605 92772 69490 TRUE FALSE 25211.97665 65963.20033 52871.8489 78589.67684 98273.58063 76990.51521 95982.53028 56088.54382 100841.1409 67222.54699 0.375052386 0.981266008 0.786519572 1.169096982 1.461913971 1.145307916 1.427832395 0.834371001 1.500108898 1 16.03665759 -4.740054705 0.912685283 1.22581693 1.43E-13 0.545227691 0.225051036 1.771911482 1.098150278 0.075240717 2.2133294 1.82E-05 4.740054705 -1.22581693 SKPELPPGLSPEAT(ph)APVTPSRPEGGEPGLSK ddPTM_A459_MK2206_30min_R1 1 SKPELPPGLSPEATAPVTPSRPEGGEPGLSK 31 2 Q9BRP8-2;Q9BRP8 Q9BRP8-2 WIBG Partner of Y14 and mago 1 SKPELPPGLS(0.021)PEAT(0.54)APVT(0.422)PS(0.016)RPEGGEPGLS(0.001)K 76.777 3.46E-05 6039700 2506.4 2229.2 1994.4 1903.2 1902.2 1717 1889.4 1719.6 1767.6 1625.3 TRUE FALSE 2293.217518 2084.078675 1859.025685 2049.784794 1826.431346 1814.215056 1763.361573 1704.565718 1951.348345 1826.654434 1.255419457 1.140926623 1.017721606 1.122152475 0.999877871 0.993190076 0.965350392 0.933162664 1.068263547 1 10.83498802 -1.522878745 0.494400511 0.985122733 9.389840385 0.751069543 0.046295909 49.9398471 0.538865039 0.025798433 434.6825115 0.03 1.522878745 8.404717652 SKPIPIMPAS(ph)PQK ddPTM_A459_MK2206_30min_R1 3 SKPIPIMPASPQK 13 1 O00429-4;O00429-5;O00429-3;O00429-9;O00429-2;O00429;O00429-8;O00429-6;O00429-7 O00429-4 DNM1L Dynamin-1-like protein 1 SKPIPIMPAS(1)PQK;S(0.417)KPIPIMPAS(0.583)PQK;SKPIPIMPAS(1)PQK 122.16 0.0055388 221291000 32709.2 32748.2 32813.2 24969.5 22587.9 24147.7 30262.9 24694.6 36086.6 39082.8 TRUE FALSE 29927.11078 30616.28623 30585.93141 26892.65522 21688.17611 25514.92191 28244.11716 24478.69772 39837.93121 43924.67232 0.681328037 0.697017977 0.696326911 0.612244868 0.493758404 0.580879049 0.643012586 0.557288112 0.906960237 1 15.4227439 -8.378880619 4.174095087 0.993573652 0.620581242 0.822415517 0.062437107 0.09572233 2.617774701 0.06690693 0.017632689 4.18E-09 8.378880619 -0.37299241 SKPIPIMPAS(ph)PQKGHAVNLLDVPVPVAR ddPTM_A459_MK2206_30min_R1 1 SKPIPIMPASPQKGHAVNLLDVPVPVAR 28 2 O00429-4;O00429-5;O00429-3;O00429-9;O00429-2;O00429;O00429-8;O00429-6;O00429-7 O00429-4 DNM1L Dynamin-1-like protein 1 S(0.004)KPIPIMPAS(0.996)PQKGHAVNLLDVPVPVAR 64.707 0.00037965 1456600 737.58 1063 785.39 845.42 869.43 613.84 694.36 832.14 512.63 458.78 TRUE FALSE 674.8449478 993.7985068 732.079915 910.5343949 834.7987621 648.5950903 648.0405113 824.8646877 565.919723 515.61713 1.308810178 1.927396219 1.419813021 1.76591184 1.619028371 1.257900587 1.256825023 1.599761993 1.097558033 1 9.010156384 -6.75847053 23.97706596 1.280795198 1.624222313 0.410178829 0.216459155 47.81451487 386160.793 0.068658121 0.065778712 1.74E-07 6.75847053 0.343427115 SKPIPIMPAS(ph)PQKGHAVNLLDVPVPVAR ddPTM_A459_MK2206_30min_R2 7 SKPIPIMPASPQKGHAVNLLDVPVPVAR 28 2 O00429-4;O00429-5;O00429-3;O00429-9;O00429-2;O00429;O00429-8;O00429-6;O00429-7 O00429-4 DNM1L Dynamin-1-like protein 1 S(0.038)KPIPIMPAS(0.962)PQKGHAVNLLDVPVPVAR;S(0.002)KPIPIMPAS(0.998)PQKGHAVNLLDVPVPVAR;S(0.007)KPIPIMPAS(0.993)PQKGHAVNLLDVPVPVAR;S(0.016)KPIPIMPAS(0.984)PQKGHAVNLLDVPVPVAR;S(0.018)KPIPIMPAS(0.982)PQKGHAVNLLDVPVPVAR;S(0.015)KPIPIMPAS(0.985)PQKGHAVNLLDVPVPVAR;S(0.217)KPIPIMPAS(0.783)PQKGHAVNLLDVPVPVAR 70.027 0.00020012 30714900 101045.7 186244.8 156104.3 174166.6 210459.3 174374.6 179310.8 130577.7 179193 154083.4 TRUE FALSE 108781.8365 176996.1541 161308.7394 159936.6316 202195.6104 181010.5476 155767.0766 147644.6537 194778.8832 149055.6713 0.72980676 1.187449981 1.082204643 1.072999305 1.356510683 1.214382157 1.045026165 0.990533621 1.306752582 1 17.18549174 -4.757548154 24.99488875 1.141538576 0.729806166 0.516702557 0.118865979 94.29375146 605601.1693 0.029840927 0.219521676 1.75E-05 4.757548154 -0.41173241 SKPLAAS(ph)PKPAGLK ddPTM_A459_MK2206_30min_R1 2 SKPLAASPKPAGLK 14 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SKPLAAS(1)PKPAGLK;SKPLAAS(1)PKPAGLK 164.93 0.0083892 435450000 7805.3 11796.4 9417.3 8874.6 6283.1 5922.7 6991.6 6545.5 7805.5 6852.7 TRUE FALSE 7141.418248 11028.45222 8778.079914 9558.12323 6032.830822 6258.038156 6525.203121 6488.273384 8616.909657 7701.664211 0.927256506 1.431957031 1.13976404 1.241046476 0.783315223 0.812556609 0.84724586 0.842450827 1.11883736 1 12.91095451 -6.254569085 24.83268562 0.885773545 1.199413818 0.465696778 0.148331872 401.8548925 1452503.818 0.042630445 0.053798755 5.56E-07 6.254569085 0.313640272 SKPPPTYES(ph)EEEDK ddPTM_A459_MK2206_30min_R1 1 SKPPPTYESEEEDK 14 1 O60885;O60885-2;O60885-3 O60885 BRD4 Bromodomain-containing protein 4 1 SKPPPT(0.049)YES(0.951)EEEDK 180.93 0.00035265 5470500 783.8 1027.3 996.31 726.81 355.95 512.8 842.78 674.49 1383.5 1433 TRUE FALSE 717.1336941 960.4225833 928.6832531 782.7890321 341.7717578 541.8342928 786.5596839 668.593005 1527.319776 1610.530859 0.445277835 0.596339138 0.576631766 0.486044106 0.212210624 0.336432109 0.488385354 0.415138277 0.948333134 1 10.65332059 -8.277106259 7.06309745 0.979672995 0.445234808 0.800387635 0.105800824 0.082161848 21.64793943 0.103737312 0.030161016 5.28E-09 8.277106259 -0.534438187 SKPPPTYES(ph)EEEDK ddPTM_A459_MK2206_30min_R2 4 SKPPPTYESEEEDK 14 1 O60885;O60885-2;O60885-3 O60885 BRD4 Bromodomain-containing protein 4 1 SKPPPTYES(1)EEEDK;SKPPPTYES(1)EEEDK;SKPPPTYES(1)EEEDK;SKPPPTYES(1)EEEDK 179.1 3.97E-05 95533000 335623 204793 261106 185897 167725 110920 273965 194364 128503 292708 TRUE FALSE 361318.5549 194623.2774 269811.1437 170708.6204 161139.2737 115141.1383 237993.0664 219768.0422 139679.9587 283156.9619 1.276036275 0.687333541 0.952867773 0.602876296 0.569081094 0.406633612 0.840498728 0.776135048 0.493295159 1 18.11124248 -2.306222541 1.141670591 0.671375965 199.9966986 0.448111031 0.186501053 473.568034 2.437014978 0.055240359 245067.7738 0.004940575 2.306222541 199.3253226 SKPPPTYES(ph)EEEDKCKPMSYEEK ddPTM_A459_MK2206_30min_R1 1 SKPPPTYESEEEDKCKPMSYEEK 23 3 O60885;O60885-2;O60885-3 O60885 BRD4 Bromodomain-containing protein 4 1 SKPPPT(0.018)Y(0.113)ES(0.864)EEEDKCKPMS(0.003)Y(0.001)EEK 70.538 0.0016822 21518000 6718.7 8120.5 8067.3 7348.5 4829 5005.6 5770.2 5981 7766.5 8124.2 TRUE FALSE 6147.239284 7591.853974 7519.714153 7914.482743 4636.650704 5289.012746 5385.280486 5928.708748 8573.855468 9130.687231 0.67325045 0.831465779 0.82356497 0.866800334 0.507809608 0.579256809 0.589800127 0.649316815 0.93901535 1 13.15650773 -8.342627533 4.661248884 0.990580225 0.692183119 0.496359424 0.112939117 0.213997097 7.965302192 0.121960592 0.032261328 4.54E-09 8.342627533 -0.298397106 SKPPPTYES(ph)EEEDKCKPMSYEEK ddPTM_A459_MK2206_30min_R2 1 SKPPPTYESEEEDKCKPMSYEEK 23 3 O60885;O60885-2;O60885-3 O60885 BRD4 Bromodomain-containing protein 4 1 SKPPPT(0.005)Y(0.006)ES(0.968)EEEDKCKPMS(0.012)Y(0.009)EEK 66.36 0.0028193 20876000 36958 29031 27737 23632 27751 13118 28425 25003 17774 31364 TRUE FALSE 39787.5329 27589.36276 28661.73774 21701.19 26661.3563 13617.21468 24692.76336 28270.97795 19319.95039 30340.59525 1.311362963 0.909321736 0.944666296 0.715252612 0.87873544 0.448811718 0.813852304 0.931787189 0.636768997 1 14.88896177 SKPPPTYESEEEDKCKPMS(ph)YEEK ddPTM_A459_MK2206_30min_R1 1 SKPPPTYESEEEDKCKPMSYEEK 23 3 O60885;O60885-2;O60885-3 O60885 BRD4 Bromodomain-containing protein 4 1 SKPPPTY(0.003)ES(0.373)EEEDKCKPMS(0.504)Y(0.12)EEK 76.015 0.00061423 32905000 5594.7 7304.5 8100 5888.6 3374.1 3624 4832.3 5042.6 7217.8 7764.6 TRUE FALSE 5118.841386 6828.975722 7550.194568 6342.140992 3239.702452 3829.187748 4509.946084 4998.51308 7968.116139 8726.537268 0.586583341 0.782552748 0.865199372 0.726764901 0.371247192 0.438798074 0.516808208 0.572794561 0.913090255 1 13.09119358 -8.349939342 4.158681488 0.990294657 0.609352397 0.487816092 0.143852099 0.224470299 6.612471388 0.159147557 0.042301257 4.47E-09 8.349939342 -0.38094226 SKPS(ph)PQKDQALGDGIAPPQK ddPTM_A459_MK2206_30min_R2 1 SKPSPQKDQALGDGIAPPQK 20 2 Q9H9J4-2;Q9H9J4;B4DP25;E5RJP3 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 S(0.02)KPS(0.98)PQKDQALGDGIAPPQK 91.547 0.0017282 8018900 14709 16161 18522 16102 18174 11772 16994 13797 13426 18437 TRUE FALSE 15835.13235 15358.46824 19139.51424 14786.41509 17460.39744 12219.99171 14762.66739 15600.31527 14593.76921 17835.4022 0.887848346 0.861122618 1.073119295 0.829048593 0.978974135 0.685153694 0.8277171 0.874682561 0.818247273 1 14.12245613 SKPVLEPLT(ph)PPLGSPR ddPTM_A459_MK2206_30min_R2 1 SKPVLEPLTPPLGSPR 16 1 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3;Q9H7P9-2 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 SKPVLEPLT(0.958)PPLGS(0.042)PR 86.136 0.021809 19976000 185520 167130 176170 169250 138340 123340 169560 149990 116620 124980 TRUE FALSE 199723.5538 158830.5672 182043.4199 155421.7336 132908.0765 128033.7901 147296.5683 169594.208 126763.3968 120901.9128 1.651947014 1.313714262 1.50571166 1.285519228 1.099304993 1.058988953 1.218314623 1.40274214 1.048481317 1 16.88347754 -5.940337393 3.48134352 1.159119016 1.472787672 0.584685334 0.131788075 0.186537051 4.617715078 0.038950401 0.059304652 1.15E-06 5.940337393 0.313668656 SKPVLEPLT(ph)PPLGSPRPR ddPTM_A459_MK2206_30min_R1 1 SKPVLEPLTPPLGSPRPR 18 2 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3;Q9H7P9-2 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 SKPVLEPLT(0.998)PPLGS(0.002)PRPR 71.286 0.028494 27506000 4329.8 4531.9 4196.9 4218.8 4726.3 3979.2 4934 4438.2 3610.6 3063.9 TRUE FALSE 3961.527773 4236.872486 3912.026121 4543.732707 4538.041463 4204.498865 4604.861863 4399.397285 3985.934791 3443.479063 1.150443403 1.230404602 1.136067927 1.319518029 1.317865269 1.221003174 1.337270179 1.277602449 1.157531298 1 11.74965119 -8.585364373 3.37474449 1.000267179 1.250486424 0.581292328 0.06489263 0.216053879 6.503616726 0.065508941 0.017311517 2.60E-09 8.585364373 0.250219245 SKPVLEPLT(ph)PPLGSPRPR ddPTM_A459_MK2206_30min_R2 1 SKPVLEPLTPPLGSPRPR 18 2 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3;Q9H7P9-2 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 SKPVLEPLT(1)PPLGSPRPR 93.062 0.00615 21196000 53307 92660 71596 84781 74556 81215 101320 76618 71238 68618 TRUE FALSE 57388.22491 88058.63914 73982.97491 77854.1211 71628.55683 84305.69374 88016.56229 86632.23567 77434.15247 66379.00028 0.86455392 1.326603877 1.114553919 1.172872758 1.079084598 1.270065734 1.325969989 1.305115101 1.166545928 1 16.01843928 -6.766899694 24.99155754 1.239635967 1.127057652 0.101858883 0.137374782 270.9521751 1240125.373 0.045421501 0.041178343 1.71E-07 6.766899694 -0.112578316 SKPYEGS(ph)QRNSTELAPPLPVR ddPTM_A459_MK2206_30min_R1 1 SKPYEGSQRNSTELAPPLPVR 21 2 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 S(0.012)KPY(0.118)EGS(0.606)QRNS(0.198)T(0.066)ELAPPLPVR 60.134 0.023523 37620000 1846.4 1854.9 2087 1597.8 1996.3 1488.7 1941.7 1564.5 1497.8 1172.8 TRUE FALSE 1689.353984 1734.145673 1945.340255 1720.862833 1916.783144 1572.988907 1812.172736 1550.821741 1653.50167 1318.095318 1.281662988 1.31564512 1.475872213 1.305567821 1.454206776 1.19338024 1.374841949 1.176562666 1.254462896 1 10.36423899 -8.739908843 0.51968648 0.99055619 1.363197283 0.603332858 0.08374095 0.833418241 0.493828338 0.101156366 0.041640381 1.82E-09 8.739908843 0.372641093 SKS(ph)DATASISLSSNLK ddPTM_A459_MK2206_30min_R1 2 SKSDATASISLSSNLK 16 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(0.002)KS(0.994)DAT(0.004)ASISLSSNLK;S(0.007)KS(0.764)DAT(0.224)AS(0.006)ISLSSNLK 265.37 3.93E-39 38275000 3477.4 3811 3753.9 3222.4 3197.3 3155.24 3222.5 2816.6 3592.3 3571.1 TRUE FALSE 3181.628869 3562.903207 3499.095727 3470.589806 3069.944771 3333.886962 3007.532905 2791.974763 3965.73244 4013.514828 0.792728819 0.887726434 0.871828279 0.864725796 0.764901813 0.830665166 0.749351387 0.695643316 0.988094628 1 11.97065051 -8.339273623 9.321567937 0.995901643 0.811456184 0.631463606 0.057027027 0.353907359 39.97535989 0.059618682 0.015412627 4.58E-09 8.339273623 -0.184445459 SKS(ph)DSYTLDPDTLR ddPTM_A459_MK2206_30min_R1 1 SKSDSYTLDPDTLR 14 1 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 S(0.368)KS(0.624)DS(0.006)Y(0.001)T(0.001)LDPDTLR 69.314 0.03347 15218000 7146.3 8107.6 7519.5 6921.5 8321.3 7728.8 8918.6 8906.6 9284.1 9152.5 TRUE FALSE 6538.469658 7579.793766 7009.097291 7454.595129 7989.845 8166.397977 8323.656467 8828.730535 10249.21542 10286.3808 0.635643361 0.736876645 0.68139586 0.724705343 0.776740154 0.793903914 0.809191943 0.858293185 0.996386933 1 13.32844785 -7.610531312 0.52522862 1.019328801 0.678276685 0.912049565 0.034245833 0.233304804 0.141501405 0.033462791 0.023327073 2.45E-08 7.610531312 -0.341052116 SKS(ph)DSYTLDPDTLR ddPTM_A459_MK2206_30min_R2 3 SKSDSYTLDPDTLR 14 1 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 S(0.095)KS(0.877)DS(0.027)Y(0.001)TLDPDTLR;S(0.044)KS(0.834)DS(0.116)YT(0.004)LDPDTLR;S(0.206)KS(0.791)DS(0.003)YTLDPDTLR 86.756 0.012608 32997400 193061 220992 180053 201568 210595 210282 237817 194687 197750 255718 TRUE FALSE 207841.8986 210017.8586 186055.8772 185099.2496 202325.9821 218284.4289 206591.3422 220133.2594 214949.9375 247373.9426 0.840193176 0.848989414 0.752123992 0.74825686 0.817895288 0.882406718 0.835137849 0.889880547 0.868927161 1 17.91633401 -8.628272344 0.452270773 1.006550902 0.798098682 0.688591252 0.038156582 0.825691001 0.407198185 0.059108813 0.027483088 2.35E-09 8.628272344 -0.20845222 SKS(ph)EDMDNVQSK ddPTM_A459_MK2206_30min_R1 2 SKSEDMDNVQSK 12 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 S(0.001)KS(0.999)EDMDNVQSK;S(0.001)KS(0.997)EDMDNVQS(0.001)K 164.15 0.00015121 21748000 3596.54 3766.5 3769.4 3625.5 2980.4 2653.88 2940.48 2950.32 3015.4 3046.35 TRUE FALSE 3290.635387 3521.300165 3513.54363 3904.736638 2861.684357 2804.140392 2744.325944 2924.525663 3328.861621 3423.754837 0.961118872 1.028490746 1.02622524 1.140483716 0.835832147 0.819024879 0.801554456 0.854186647 0.972283875 1 11.74136368 -6.277254312 24.90870976 0.866170592 1.037405125 0.526009715 0.072994243 575.2642732 906046.1133 0.022791008 0.025929871 5.28E-07 6.277254312 0.171234533 SKS(ph)EDMDNVQSK ddPTM_A459_MK2206_30min_R2 4 SKSEDMDNVQSK 12 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 S(0.03)KS(0.97)EDMDNVQSK;S(0.08)KS(0.92)EDMDNVQSK;S(0.33)KS(0.67)EDMDNVQSK;S(0.004)KS(0.996)EDMDNVQSK 192.4 0.00070701 78720000 352227 350049 322381 305043 281507 215296.3 342380 257149 246976 293379 TRUE FALSE 379193.7699 332666.0757 333129.0216 280120.0111 270453.6207 223489.5516 297425.0947 290759.2572 268457.526 283806.0673 1.336101704 1.172159845 1.17379105 0.98701206 0.952952216 0.787472776 1.047987091 1.024499793 0.945918911 1 18.11454591 -5.533441565 1.510888053 0.955122475 1.285650789 0.73165763 0.07468713 0.24130766 1.040704215 0.024425272 0.076975991 2.93E-06 5.533441565 0.330528314 SKS(ph)EEAHAEDSVMDHHFR ddPTM_A459_MK2206_30min_R2 2 SKSEEAHAEDSVMDHHFR 18 1 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 S(0.165)KS(0.835)EEAHAEDSVMDHHFR;S(0.129)KS(0.871)EEAHAEDSVMDHHFR 91.657 0.002264 17114200 44052 76012 62175 63061 54548 62203 65403 63577 93452 41050 TRUE FALSE 47424.65499 72237.35461 64247.88347 57908.71458 52406.17144 64570.17875 56815.50754 71886.73219 101580.286 39710.54186 1.194258571 1.819097681 1.617904981 1.458270572 1.319704264 1.626021095 1.43074118 1.810268227 2.55801813 1 15.27723443 -7.859444746 5.608944915 1.904458326 1.510005799 0.088579616 0.388990359 0.36648684 17.15491938 0.204136121 0.096274709 1.38E-08 7.859444746 -0.394452527 SKS(ph)ETGDSSIFR ddPTM_A459_MK2206_30min_R1 1 SKSETGDSSIFR 12 1 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 S(0.026)KS(0.928)ET(0.042)GDS(0.003)S(0.001)IFR 111.66 0.031824 4706500 1386.4 1425.5 1356.7 1008.3 865.72 846.19 1178.1 1141.2 1010.7 849.51 TRUE FALSE 1268.4794 1332.699691 1264.610984 1085.959441 831.2365392 894.1005465 1099.511099 1131.222609 1115.765882 954.7537123 1.328593315 1.39585704 1.324541573 1.137423638 0.870629282 0.936472448 1.151617516 1.184831852 1.168642622 1 9.898984814 -5.808068329 3.595887449 1.056706807 1.360241094 0.653443987 0.096851493 0.156608879 4.154671893 0.031745227 0.051915462 1.56E-06 5.808068329 0.303534287 SKS(ph)LCHDEIENLLDSDHR ddPTM_A459_MK2206_30min_R1 1 SKSLCHDEIENLLDSDHR 18 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(0.166)KS(0.834)LCHDEIENLLDSDHR 77.13 0.0060046 3854200 1594.5 1004.2 986.33 912.18 1573.4 1467.5 1392.8 1527.6 855.03 679.56 TRUE FALSE 1458.879402 938.8263975 919.3806677 982.4362617 1510.728146 1550.588582 1299.888853 1514.244354 943.9134283 763.7490232 1.910155506 1.229234171 1.203773281 1.286333903 1.978042656 2.030233146 1.701984309 1.982646535 1.235894776 1 9.57695482 -6.243813187 24.60183593 1.725063427 1.380106984 0.07901585 0.365049694 1218.686138 1700985.532 0.104940668 0.135149851 5.70E-07 6.243813187 -0.344956443 SKS(ph)LGDLTSEDIACNFESK ddPTM_A459_MK2206_30min_R1 1 SKSLGDLTSEDIACNFESK 19 1 Q4KWH8-2;A0A2U3TZV8;Q4KWH8 Q4KWH8-2 PLCH1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1" 1 S(0.167)KS(0.828)LGDLT(0.004)S(0.001)EDIACNFESK 102.78 0.00058266 10974000 3013.4 2939 3656.3 2670.8 2824.4 2485.1 2514.9 2686.1 2321.8 1974.2 TRUE FALSE 2757.094506 2747.670566 3408.120543 2876.505479 2711.898167 2625.804214 2347.13561 2662.615711 2563.159419 2218.7788 1.242618014 1.238370659 1.536034391 1.296436345 1.222248097 1.183445693 1.057850205 1.200036574 1.155211785 1 11.11555013 -6.556639482 1.908836994 1.122773824 1.336649587 0.530428517 0.093641804 0.291238481 2.1513934 0.036613449 0.038803086 2.78E-07 6.556639482 0.213875763 SKS(ph)MDLGIADETK ddPTM_A459_MK2206_30min_R1 1 SKSMDLGIADETK 13 1 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-4;Q8TEW0-8 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.031)KS(0.962)MDLGIADET(0.007)K 161.08 0.0017268 18203000 2359 1936.4 1999.3 1816.5 1606.5 1375 1745.5 1785.3 1628.2 1814.7 TRUE FALSE 2158.354662 1810.340008 1863.593086 1956.407145 1542.509703 1452.851312 1629.06088 1769.69131 1797.457217 2039.518736 1.058266651 0.887630977 0.913741587 0.95924941 0.756310631 0.712350069 0.79874769 0.867700443 0.881314393 1 10.99401305 -2.175139415 0.701143868 0.836121472 10.40326565 0.327702429 0.083493643 120.387354 1.745369648 0.034412184 1736.31151 0.006681294 2.175139415 9.567144177 SKS(ph)MDLGIADETK ddPTM_A459_MK2206_30min_R2 1 SKSMDLGIADETK 13 1 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-4;Q8TEW0-8 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.012)KS(0.988)MDLGIADETK 136.36 0.005213 10116000 28096 27560 24366 27169 24994 17089 29385 23722 23039 31615 TRUE FALSE 30247.05136 26191.41048 25178.35028 24949.20579 24012.60998 17739.33387 25526.7142 26822.54685 25042.89058 30583.40514 0.989002082 0.856392882 0.823268376 0.815775931 0.785151616 0.580031353 0.834658995 0.877029445 0.818839186 1 14.90046142 -10.83380859 16.55731468 0.999999997 0.815081124 0.238470674 0.096125884 0 0 0.098825447 0.023968692 1.47E-11 10.83380859 -0.184918874 SKS(ph)NPDFLK ddPTM_A459_MK2206_30min_R2 2 SKSNPDFLK 9 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;H0Y7E2;J3QL44;K7EL39;J3QRL2 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.002)KS(0.998)NPDFLK;S(0.016)KS(0.984)NPDFLK 79.283 0.027131 209740000 726000 605430 585930 563860 521570 368220 716430 523620 363310 610540 TRUE FALSE 781583.1182 575365.2266 605464.6138 517790.8343 501090.5411 382232.8701 622361.8804 592058.9319 394910.0471 590618.1298 1.323330725 0.974174678 1.025137196 0.876693092 0.848417134 0.647174292 1.053746658 1.002439482 0.668638545 1 19.17186612 SKS(ph)PIPGQGYLGTER ddPTM_A459_MK2206_30min_R2 1 SKSPIPGQGYLGTER 15 1 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KRE4 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(0.276)KS(0.724)PIPGQGYLGTER 60.09 0.046673 6095800 28254 17097 20936 22427 18627 14992 21184 18874 12599 24832 TRUE FALSE 30417.14796 16247.98784 21633.99579 20594.64236 17895.61039 15562.53107 18402.51535 21340.8966 13694.83825 24021.73387 1.266234491 0.676386972 0.900600927 0.857333716 0.744975799 0.647852114 0.76607773 0.88839951 0.570101988 1 14.55205267 -4.753919013 24.99918147 0.78001331 1.266235354 0.575896922 0.124238155 188.2519704 625734.9087 0.029422534 0.302286458 1.76E-05 4.753919013 0.486222045 SKS(ph)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK ddPTM_A459_MK2206_30min_R1 2 SKSPLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK 36 2 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.254)KS(0.669)PLPPEEEAKDEEEDQT(0.076)LVNLDTYTSDLHFQVSK;S(0.296)KS(0.645)PLPPEEEAKDEEEDQT(0.059)LVNLDTYTSDLHFQVSK 68.353 1.50E-05 80180000 9657.7 9891.2 11957.8 8705.4 7634.2 6727.4 9053.4 10375.1 9509.4 9774.8 TRUE FALSE 8836.2619 9247.281082 11146.13785 9375.891416 7330.113648 7108.299574 8449.464205 10284.39159 10497.93616 10985.77602 0.804336615 0.841750375 1.014597224 0.853457362 0.667236765 0.64704574 0.76912766 0.936155223 0.9555935 1 13.42334916 -7.853032984 4.983128858 0.96686684 0.800844732 0.378348276 0.097031073 0.274250705 11.28935922 0.064380695 0.030106324 1.40E-08 7.853032984 -0.166022108 SKS(ph)PPKVPIVIQDDSLPAGPPPQIR ddPTM_A459_MK2206_30min_R1 2 SKSPPKVPIVIQDDSLPAGPPPQIR 25 2 Q7Z422-4;Q7Z422-5;Q7Z422;Q7Z422-2;Q7Z422-3 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 1 S(0.305)KS(0.695)PPKVPIVIQDDSLPAGPPPQIR;S(0.211)KS(0.789)PPKVPIVIQDDSLPAGPPPQIR 62.765 0.0032795 104686000 5060.7 5259.9 5900.8 5086 4104.4 3905.9 4521 4471.1 5251.7 5012 TRUE FALSE 4630.26089 4917.479554 5500.270137 5477.724601 3940.913057 4127.048683 4219.412339 4432.009644 5797.633008 5632.924399 0.821999474 0.872988737 0.976450197 0.97244774 0.699621152 0.732665378 0.749062483 0.78680439 1.029240337 1 12.45966839 -8.266434578 24.90715255 1.014620202 0.827978477 0.417760489 0.088818706 476.0775618 2373781.676 0.088353896 0.025574867 5.41E-09 8.266434578 -0.186641725 SKS(ph)QSSGSSATHPISVPGAR ddPTM_A459_MK2206_30min_R1 1 SKSQSSGSSATHPISVPGAR 20 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(0.246)KS(0.728)QS(0.019)S(0.007)GSSATHPISVPGAR 99.943 0.00043371 12183000 2469.5 1655.7 2052.9 1555.7 3881.5 3749.2 3741.9 3286.5 1819.6 1549.5 TRUE FALSE 2259.456057 1547.913629 1913.554868 1675.520284 3726.891636 3961.476464 3492.284678 3257.766477 2008.753932 1741.463758 1.2974465 0.888857791 1.098819805 0.962133306 2.140091414 2.274796961 2.005373159 1.870705871 1.153485924 1 10.76608473 -6.250859106 24.74277911 1.824211801 1.052103506 0.404873085 0.39548779 568.224939 1328836.736 0.117877411 0.150503179 5.61E-07 6.250859106 -0.772108295 SKS(ph)QSSGSSATHPISVPGAR ddPTM_A459_MK2206_30min_R2 2 SKSQSSGSSATHPISVPGAR 20 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(0.219)KS(0.774)QS(0.003)S(0.003)GSSATHPISVPGAR;S(0.191)KS(0.468)QS(0.15)S(0.15)GS(0.033)S(0.005)AT(0.002)HPISVPGAR 72.883 0.0044345 24054000 63137.3 74096 62312 89763 75923 79984 95176 66571.2 67004 83684 TRUE FALSE 67971.14023 70416.50039 64389.45098 82429.07576 72941.88154 83027.84717 82679.27687 75272.28441 72831.8868 80953.39793 0.839632949 0.86983996 0.795389108 1.018228732 0.901035452 1.025625227 1.021319413 0.92982242 0.899676711 1 16.30480402 -5.759898394 24.99999841 0.969371936 0.838442591 0.626076245 0.048083617 27.59671532 447694.8272 0.013518249 0.02190008 1.74E-06 5.759898394 -0.130929345 SKS(ph)Y(ph)DS(ph)Y(ph)EILGK ddPTM_A459_MK2206_30min_R1 1 SKSYDSYEILGK 12 1 O75691 O75691 UTP20 Small subunit processome component 20 homolog 4 S(0.114)KS(0.972)Y(0.968)DS(0.953)Y(0.993)EILGK 48.659 0.047677 0 382.86 251.46 328.3 271.06 319.85 504.32 424.73 382.88 288.38 244.75 TRUE FALSE 350.2957465 235.0899083 306.0159107 291.9370882 307.1096972 532.8741626 396.3970367 379.5325205 318.358133 275.0714778 1.273471715 0.854650254 1.112495971 1.061313556 1.116472343 1.937220707 1.441069208 1.379759631 1.157365117 1 8.103662744 -6.554122804 24.99867712 1.423375977 1.065669889 0.263561939 0.246207917 232.9008082 186344.709 0.080144163 0.080144857 2.79E-07 6.554122804 -0.357706088 SKS(ph)YNTPLLNPVQEHEAEGAAAGGTSIR ddPTM_A459_MK2206_30min_R1 1 SKSYNTPLLNPVQEHEAEGAAAGGTSIR 28 1 P85299;P85299-5;P85299-2;P85299-4;P85299-3 P85299 PRR5 Proline-rich protein 5 1 S(0.09)KS(0.321)Y(0.267)NT(0.321)PLLNPVQEHEAEGAAAGGTSIR 76 5.35E-05 9320100 263.82 451.78 533.01 317.7 559.59 408.2 408.87 589.1 442.95 397.99 TRUE FALSE 241.3807236 422.3690399 496.8307663 342.169309 537.3003453 431.3119312 381.5950283 583.9495608 488.9962376 447.2960059 0.539644263 0.944271879 1.110742684 0.764972869 1.201218742 0.964265108 0.853115215 1.30551034 1.093227373 1 8.805086066 -4.771617318 3.325760929 1.034807569 0.466667475 0.497765838 0.149149017 0.277981194 4.771379024 0.037672085 0.414914805 1.69E-05 4.771617318 -0.568140094 SKS(ph)YNTPLLNPVQEHEAEGAAAGGTSIR ddPTM_A459_MK2206_30min_R2 2 SKSYNTPLLNPVQEHEAEGAAAGGTSIR 28 1 P85299;P85299-5;P85299-2;P85299-4;P85299-3 P85299 PRR5 Proline-rich protein 5 1 S(0.094)KS(0.421)Y(0.358)NT(0.127)PLLNPVQEHEAEGAAAGGTSIR;S(0.143)KS(0.542)Y(0.123)NT(0.192)PLLNPVQEHEAEGAAAGGTSIR 81.055 2.58E-05 63891000 48788 63961 55466 66015 64821 62542 63124 46338 54632 52474 TRUE FALSE 52523.24679 60784.78975 57315.20876 60621.36333 62275.80184 64922.07964 54835.74297 52394.5357 59383.79261 50761.77768 1.034700698 1.197451952 1.129101686 1.194232474 1.226824684 1.27895599 1.080256553 1.032165107 1.169852502 1 15.63145497 -7.476090574 22.84144517 1.07184743 1.178776183 0.341006248 0.072456448 180.4639552 88100.36915 0.030370934 0.020474555 3.34E-08 7.476090574 0.106928754 SKSDAT(ph)ASISLSSNLK ddPTM_A459_MK2206_30min_R2 1 SKSDATASISLSSNLK 16 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 SKS(0.038)DAT(0.956)AS(0.006)ISLSSNLK 169.02 0.00012502 9032500 32942 40991 37104 44126 30721 27662 37498 31684 23918 34408 TRUE FALSE 35464.06485 38955.44655 38341.02884 40520.76465 29514.73918 28714.69679 32574.46756 35825.20759 25998.34441 33285.26978 1.065458237 1.170350933 1.151891786 1.217378285 0.886720744 0.862684815 0.978645142 1.076308164 0.781076572 1 15.02259624 -6.264257941 24.99819296 0.933697217 1.152677177 0.626649842 0.083308606 167.0259499 1481371.465 0.025417907 0.030100419 5.44E-07 6.264257941 0.21897996 SKSEDMDNVQS(ph)K ddPTM_A459_MK2206_30min_R1 1 SKSEDMDNVQSK 12 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 SKS(0.094)EDMDNVQS(0.905)K 157.99 0.0021356 17774000 3468.8 4207.3 3813 3022.7 2999.4 2672 3039.8 3422.7 3033.5 3401 TRUE FALSE 3173.760345 3933.404005 3554.184184 3255.508878 2879.927547 2823.286331 2837.020488 3392.775695 3348.84318 3822.341556 0.830318353 1.029056129 0.929844738 0.851705383 0.753445893 0.738627433 0.742220559 0.887617091 0.876123479 1 11.90024098 -5.828509927 3.840648452 0.817218331 0.940931265 0.178441636 0.088268528 0.297771991 8.702199104 0.025414249 0.040550359 1.48E-06 5.828509927 0.123712933 SKSEEAHAEDSVMDHHFR ddPTM_A459_MK2206_30min_R2 1 SKSEEAHAEDSVMDHHFR 18 1 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 60.541 0.013205 8742700 20371 55795 33600 65593 69960 76955 61597 42453 54560 37513 FALSE TRUE 21930.61942 53024.30143 34720.20723 60233.84208 67213.01888 79883.57645 53509.23991 48001.75286 59305.53018 36288.95388 0.604333194 1.461169192 0.956770684 1.659839583 1.852161931 2.201319352 1.474532445 1.322764856 1.634258468 1 15.14724285 -5.765812329 24.98273186 1.636892087 1.052798788 0.354005974 0.35682351 118.5140319 677077.9446 0.100467623 0.155034101 1.71E-06 5.765812329 -0.584093298 SKSERPPTILMTEEPSS(ph)PK ddPTM_A459_MK2206_30min_R2 1 SKSERPPTILMTEEPSSPK 19 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SKSERPPTILMT(0.001)EEPS(0.062)S(0.937)PK 68.291 0.021947 6154000 16867 17367 14329 13266 12779 8850.3 12946 10383 9293.4 13404 TRUE FALSE 18158.35049 16504.58003 14806.72171 12182.12536 12277.23225 9187.104368 11246.17465 11740.09375 10101.72313 12966.62858 1.400391041 1.272850528 1.141909913 0.939498289 0.946833032 0.708519128 0.867316788 0.905408347 0.779055486 1 13.6625158 -5.483626828 1.154026282 0.849484165 1.418970779 0.857917599 0.077393584 0.216411158 0.487941463 0.025756692 0.111435215 3.28E-06 5.483626828 0.569486613 SKSIS(ph)SSNPDLAVAPGSVDDEVSR ddPTM_A459_MK2206_30min_R1 1 SKSISSSNPDLAVAPGSVDDEVSR 24 1 K7ESB7;K7EKT0;K7EP20;Q96HP0 K7ESB7;Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 S(0.239)KS(0.088)IS(0.385)S(0.14)S(0.148)NPDLAVAPGSVDDEVSR 124.07 8.18E-08 6744400 1759.2 1514.6 1761.8 1784.8 1954.5 1396.6 1527.5 2031.8 1576.6 1695.8 TRUE FALSE 1609.570802 1415.999265 1642.213925 1922.265605 1876.648126 1475.674285 1425.603262 2014.036187 1740.493212 1905.888507 0.844525163 0.742960178 0.861652672 1.008592894 0.984657875 0.774271045 0.747999296 1.05674397 0.913218798 1 10.89624801 -1.522878747 0.084768354 1.081880584 0.360291582 0.181573396 0.099676669 341.7776869 2.106669217 2.528794868 28.75817961 0.03 1.522878747 -0.721589002 SKSISS(ph)SNPDLAVAPGSVDDEVSR ddPTM_A459_MK2206_30min_R2 1 SKSISSSNPDLAVAPGSVDDEVSR 24 1 K7ESB7;K7EKT0;K7EP20;Q96HP0 K7ESB7;Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 S(0.155)KS(0.155)IS(0.155)S(0.381)S(0.155)NPDLAVAPGSVDDEVSR 81.406 0.00011914 4430500 37908 51563 41419 45804 47158 50094 48698 35269 46608 45971 TRUE FALSE 40810.26563 49002.4564 42799.88879 42061.66668 45306.33997 52000.36227 42303.8941 39878.7794 50661.87959 44470.97003 0.91768328 1.101897628 0.962423099 0.945823009 1.018784612 1.169310277 0.951269875 0.89673734 1.139212379 1 15.44057625 -6.50171907 24.36225763 1.02809397 0.988275582 0.064488929 0.087520819 2195.681636 2528005.934 0.027821254 0.031216837 3.15E-07 6.50171907 -0.039818388 SKSPLPPEEEAKDEEEDQT(ph)LVNLDTYTSDLHFQVSK ddPTM_A459_MK2206_30min_R1 1 SKSPLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK 36 2 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.042)KS(0.042)PLPPEEEAKDEEEDQT(0.907)LVNLDT(0.005)Y(0.001)T(0.001)SDLHFQVSK 54.05 0.0003611 65238000 3781.5 3958.6 4556.4 3727.7 3010.8 2316.5 3425.6 3585.6 3476.9 2917 TRUE FALSE 3459.863568 3700.89442 4247.124263 4014.8081 2890.873461 2447.658228 3197.084474 3554.251477 3838.336197 3278.379982 1.055357703 1.128879032 1.295494813 1.224631715 0.881799388 0.746606019 0.975202537 1.084148725 1.170802719 1 11.67876737 -6.254119578 24.90998714 0.969081771 1.18124741 0.395527929 0.120649977 617.2527066 2100568.226 0.040459449 0.051167693 5.57E-07 6.254119578 0.212165638 SKSQSSSNCS(ph)NPISVPLRR ddPTM_A459_MK2206_30min_R2 1 SKSQSSSNCSNPISVPLRR 19 2 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.02)KS(0.126)QS(0.031)S(0.043)S(0.177)NCS(0.603)NPISVPLRR 87.208 0.0038502 14342000 8801.2 14578 10780 13452 16493 17515 15579 18313 16058 14765 TRUE FALSE 9475.026639 13854.07772 11139.39982 12352.92857 15845.40195 18181.5456 13533.45859 20706.57198 17454.69581 14283.21926 0.663367723 0.969954845 0.779894197 0.864856049 1.10937189 1.272930512 0.947507585 1.449713234 1.222042139 1 13.80203356 -6.300888655 2.992917008 1.192687677 0.820113883 0.571638304 0.148364897 0.190027821 3.417329695 0.046895667 0.056922272 5.00E-07 6.300888655 -0.372573794 SKSYNT(ph)PLLNPVQEHEAEGAAAGGTSIR ddPTM_A459_MK2206_30min_R1 1 SKSYNTPLLNPVQEHEAEGAAAGGTSIR 28 1 P85299;P85299-5;P85299-2;P85299-4;P85299-3 P85299 PRR5 Proline-rich protein 5 1 S(0.287)KS(0.287)Y(0.017)NT(0.409)PLLNPVQEHEAEGAAAGGTSIR 85.242 0.0059938 0 466.77 413.85 596.48 416.98 541.45 358.54 496.35 432.07 401.39 484.77 TRUE FALSE 427.0687604 386.9082898 555.9925995 449.0958718 519.8829 378.840225 463.2393971 428.2924575 443.1159269 544.8269674 0.783861273 0.710148933 1.020493905 0.824290828 0.954216533 0.695340443 0.850250492 0.786107302 0.813314967 1 9.089654304 -11.00244414 2.693673265 1.006806169 0.828085953 0.233512978 0.09428793 14941446.42 15505401.69 758057.986 0.023816558 9.94E-12 11.00244414 -0.178720217 SKT(ph)FSPGPQSQYVCR ddPTM_A459_MK2206_30min_R1 1 SKTFSPGPQSQYVCR 15 1 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 S(0.029)KT(0.864)FS(0.106)PGPQS(0.001)QYVCR 149.59 0.0033507 0 592.28 448.68 889.36 779.26 710.9 478.64 743.65 850.65 457.73 407.77 TRUE FALSE 541.9034758 419.4708504 828.9927211 839.2787402 682.5833476 505.7401832 694.0424654 843.2128567 505.3126715 458.2876261 1.182452776 0.915300406 1.808891783 1.831336245 1.489421291 1.103543178 1.514425496 1.839920628 1.102610332 1 8.840109523 -8.497684281 21.42011409 0.999999557 1.458166628 0.231253678 0.301433472 157.421064 133837.2708 0.310965963 0.080291066 3.18E-09 8.497684281 0.458167071 SKT(ph)PPPPPQTAQTK ddPTM_A459_MK2206_30min_R1 1 SKTPPPPPQTAQTK 14 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.047)KT(0.953)PPPPPQTAQTK 137.52 0.0008116 27475000 5635.2 5821.7 4931.3 5246.1 5295.1 4398.1 4869.9 4924.3 5389.3 4733.9 TRUE FALSE 5155.896648 5442.706272 4596.577095 5650.155531 5084.184954 4647.116621 4545.037857 4881.247364 5949.537021 5320.371271 0.969085875 1.022993696 0.863957957 1.061985197 0.955607174 0.873457205 0.854270806 0.917463672 1.118255986 1 12.37731121 -8.250129054 24.56026055 1.059127996 0.939624556 0.322043721 0.069222914 615.3534941 1336242.438 0.049406889 0.018284635 5.62E-09 8.250129054 -0.11950344 SKT(ph)PPPPPQTAQTK ddPTM_A459_MK2206_30min_R2 1 SKTPPPPPQTAQTK 14 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.141)KT(0.859)PPPPPQTAQTK 88.224 0.029154 14368000 46764 46019 42843 47932 43580 34648 46983 36655 36293 51683 TRUE FALSE 50344.2878 43733.76338 44271.36424 44015.80227 41868.83023 35966.55392 40814.07566 41445.93436 39449.69954 49996.58794 1.006954472 0.87473496 0.885487711 0.880376123 0.837433752 0.71938017 0.816337221 0.828975257 0.789047836 1 15.60954202 -1.522883649 0.673765024 0.823559443 19.44725842 0.327767986 0.068848902 263.2849826 1.550656714 0.027115443 7350.825785 0.029999661 1.522883649 18.62369898 SKT(ph)PTGPELDTSYK ddPTM_A459_MK2206_30min_R1 1 SKTPTGPELDTSYK 14 1 Q8NF91;Q8NF91-4;A0A0C4DG40;E7ENN3;Q8NF91-2;A0A5F9ZHE1;A0A5F9ZH87;H0Y325;F8WAI0;Q5JV20;Q8NF91-9;H0Y326;Q8NF91-3;Q8NF91-11;Q8NF91-8;A0A5F9ZH86 Q8NF91 SYNE1 Nesprin-1 1 S(0.112)KT(0.828)PT(0.06)GPELDTSYK 116.9 0.0035757 14453000 2652.2 2898.1 2581.5 2376.6 2306.7 2150.3 2626.9 2552 2620.1 2360.1 TRUE FALSE 2426.616463 2709.433163 2406.274972 2559.646144 2214.819254 2272.048128 2451.664294 2529.688133 2892.468771 2652.487006 0.914845749 1.021468968 0.907176913 0.964998561 0.834997212 0.856572765 0.924288899 0.953704251 1.090474247 1 11.37312997 -8.081932272 4.443803148 1.043655631 0.9186165 0.473748002 0.052894632 0.208723341 7.27836284 0.040329177 0.014520521 8.28E-09 8.081932272 -0.125039131 SKT(ph)SPVVSGSSSK ddPTM_A459_MK2206_30min_R1 1 SKTSPVVSGSSSK 13 1 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 SKT(0.691)S(0.306)PVVS(0.001)GS(0.001)SSK 141.82 0.0083793 11581000 5673.4 5361.7 4918.9 4710.1 3867.8 4074.4 4531.7 4786.9 1648.4 3587.7 TRUE FALSE 5190.847538 5012.652355 4585.018773 5072.872718 3713.737336 4305.089007 4229.398562 4745.048638 1819.757079 4032.171362 1.287357871 1.243164515 1.137109106 1.258099486 0.921026663 1.067685031 1.048913397 1.176797366 0.45130946 1 11.97734124 -6.554590742 0.473868368 0.856543756 1.30717274 0.377797972 0.182903175 1.386806226 0.637830458 0.162320803 0.277303984 2.79E-07 6.554590742 0.450628983 SKTPS(ph)SPCPASK ddPTM_A459_MK2206_30min_R1 2 SKTPSSPCPASK 12 1 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 SKT(0.008)PS(0.697)S(0.294)PCPASK;S(0.001)KT(0.078)PS(0.628)S(0.292)PCPAS(0.001)K 152.16 0.0023883 20725500 9474.8 8767.1 8112.4 7869.3 7473.9 6455.3 7746.7 7605.5 3637 4995.8 TRUE FALSE 8668.918506 8196.360197 7561.75289 8475.39485 7176.198737 6820.793507 7229.931778 7539.005915 4015.079165 5614.71742 1.543963455 1.459799235 1.346773546 1.509496243 1.278105058 1.214806195 1.287675093 1.342722234 0.715099063 1 12.4549977 -7.6099817 0.589195268 0.914228748 1.468768121 0.632230877 0.144003593 0.529776208 0.380572171 0.135395846 0.083722074 2.45E-08 7.6099817 0.554539374 SKTPS(ph)SPCPASK ddPTM_A459_MK2206_30min_R2 2 SKTPSSPCPASK 12 1 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 S(0.01)KT(0.062)PS(0.89)S(0.038)PCPASK;SKT(0.006)PS(0.67)S(0.324)PCPASK 150.11 0.0075833 27480000 168140 268317 201045 267184 252935 274016 242499 195519 221149 250208 TRUE FALSE 181012.9277 254992.7679 207747.74 245354.2125 243003.501 284443.8709 210658.59 221074.0046 240384.1403 242043.7335 0.747852155 1.053498739 0.858306625 1.013677194 1.003965265 1.175175522 0.870332758 0.913363885 0.993143416 1 17.88490822 -4.750838001 24.98292689 0.983725357 0.747851657 0.400775339 0.087590135 486.479063 1146347.389 0.022092774 0.311780931 1.77E-05 4.750838001 -0.2358737 SKTPSS(ph)PCPASK ddPTM_A459_MK2206_30min_R2 1 SKTPSSPCPASK 12 1 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 SKT(0.003)PS(0.192)S(0.799)PCPAS(0.006)K 135.14 0.0071922 4888000 23919 34203 29780 34363 34584 30118 38137 25023 25191 31010 TRUE FALSE 25750.25703 32504.52876 30772.85034 31555.43298 33226.05839 31264.16159 33129.56609 28293.59202 27382.06765 29998.14624 0.858394943 1.083551247 1.025825066 1.051912766 1.107603721 1.04220312 1.104387112 0.943178015 0.912791991 1 14.87258573 -7.785477049 24.73739555 0.945988639 1.04356653 0.246059023 0.069354616 269.949201 277802.6817 0.036821424 0.017703271 1.64E-08 7.785477049 0.097577891 SKTPTGPELDT(ph)SYK ddPTM_A459_MK2206_30min_R1 1 SKTPTGPELDTSYK 14 1 Q8NF91;Q8NF91-4;A0A0C4DG40;E7ENN3;Q8NF91-2;A0A5F9ZHE1;A0A5F9ZH87;H0Y325;F8WAI0;Q5JV20;Q8NF91-9;H0Y326;Q8NF91-3;Q8NF91-11;Q8NF91-8;A0A5F9ZH86 Q8NF91 SYNE1 Nesprin-1 1 S(0.002)KT(0.051)PT(0.011)GPELDT(0.777)S(0.157)YK 131.35 0.0092918 15158000 6134.3 6891.9 6650.3 6430.5 5715.2 5456.2 6008 6330.6 6135.3 6043.4 TRUE FALSE 5612.545573 6443.236057 6198.896165 6925.778224 5487.551482 5765.125329 5607.217282 6275.252232 6773.08639 6792.102017 0.82633411 0.948636525 0.912662405 1.019681125 0.807931251 0.848798401 0.825549626 0.923904296 0.997200333 1 12.72964241 -8.157650416 3.681958554 0.999589971 0.888057052 0.350056724 0.061244551 0.292649812 6.901219115 0.050915223 0.016818301 6.96E-09 8.157650416 -0.111532918 SKTS(ph)PVVSGSSSK ddPTM_A459_MK2206_30min_R2 1 SKTSPVVSGSSSK 13 1 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.003)KT(0.263)S(0.734)PVVSGSSSK 67.994 0.037521 46643000 245870 283590 225630 296130 316900 213450 330410 264980 265740 304570 TRUE FALSE 264693.9962 269507.333 233152.3916 271935.2317 304456.9137 221572.9893 287026.7701 299613.7958 288853.5849 294631.9058 0.898388773 0.914725553 0.791334499 0.922966 1.033346721 0.752033249 0.974187671 1.016908861 0.980388 1 18.16855414 -7.500666994 24.76468049 0.998298742 0.888624082 0.352078709 0.071897837 775.2150748 864318.3923 0.030214607 0.02016967 3.16E-08 7.500666994 -0.109674661 SKVGS(ph)TENIK ddPTM_A459_MK2206_30min_R1 1 SKVGSTENIK 10 1 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.017)KVGS(0.906)T(0.077)ENIK 126.09 0.016691 105980000 4205.5 4776.9 3884.1 3853.6 4124.6 3378.1 3301.9 3526.7 3133.9 2965.7 TRUE FALSE 3847.800141 4465.922942 3620.458114 4150.40494 3960.308448 3569.365103 3081.636276 3495.866434 3459.68012 3333.113306 1.154416243 1.339865325 1.086209133 1.245203676 1.188170963 1.070880218 0.924551911 1.048829161 1.037972551 1 11.70265465 -6.844701306 3.27478885 1.005810215 1.208152006 0.659684301 0.068210726 0.146246818 3.130021104 0.024462976 0.02173722 1.43E-07 6.844701306 0.202341791 SKVGS(ph)TENIK ddPTM_A459_MK2206_30min_R2 2 SKVGSTENIK 10 1 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.028)KVGS(0.903)T(0.069)ENIK;SKVGS(0.684)T(0.316)ENIK 111.88 0.037198 133082000 498171 619999 527030 718998 642319 493734 686554 650324 473039 614471 TRUE FALSE 536311.3548 589210.7512 544600.9172 660253.5634 617098.3287 512523.3933 596408.6351 735323.5797 514183.0772 594420.8616 0.902241811 0.991234981 0.916187423 1.110750995 1.038150524 0.862223092 1.003344051 1.237042014 0.865015194 1 19.18112522 -5.720998177 24.99990439 1.020430958 0.942022709 0.107766081 0.104860428 371.9943093 229956.3347 0.028508607 0.049377595 1.90E-06 5.720998177 -0.07840825 SKVSSSSGTTPFSSAAALPPGS(ph)YASLGR ddPTM_A459_MK2206_30min_R1 1 SKVSSSSGTTPFSSAAALPPGSYASLGR 28 1 H0Y5T1;Q7Z460-2;Q7Z460-3;Q7Z460 H0Y5T1;Q7Z460 CLASP1 CLIP-associating protein 1 1 SKVSSSSGTTPFSSAAALPPGS(0.607)YAS(0.393)LGR 140.66 6.01E-13 14974000 3561.5 2607 3379.5 2702.6 3550.3 2596.9 1764.2 2831.2 1424.1 802.39 TRUE FALSE 3258.575723 2437.283826 3150.108956 2910.75472 3408.884033 2743.934234 1646.513437 2806.447117 1572.140291 901.7961309 3.613428369 2.70269936 3.493149779 3.227730327 3.780104966 3.042743409 1.825815592 3.112063825 1.743343354 1 9.81665751 -8.282460839 0.590216427 0.985955453 3.356836583 0.704540591 0.478085826 0.446115202 0.372138434 0.488587347 0.231766676 5.22E-09 8.282460839 2.37088113 SKVSSSSGTTPFSSAAALPPGSYAS(ph)LGR ddPTM_A459_MK2206_30min_R1 1 SKVSSSSGTTPFSSAAALPPGSYASLGR 28 1 H0Y5T1;Q7Z460-2;Q7Z460-3;Q7Z460 H0Y5T1;Q7Z460 CLASP1 CLIP-associating protein 1 1 SKVSSSSGTTPFSSAAALPPGS(0.112)YAS(0.888)LGR 120.42 2.20E-12 12330000 2028.4 1746.1 1615.4 1975.5 2312.8 1596.5 1261 1941.7 866.46 430.02 TRUE FALSE 1855.873928 1632.428573 1505.751149 2127.653352 2220.676279 1686.89245 1176.880991 1924.723922 956.5316177 483.2941241 3.840050677 3.377712435 3.11559995 4.402398552 4.594875393 3.490405462 2.435123731 3.982510496 1.97919149 1 8.916757644 -8.540758584 0.880323404 0.965338322 3.760652062 0.665445427 0.618844868 0.419500933 0.719788252 0.620761096 0.217808423 2.88E-09 8.540758584 2.79531374 SKVSSSSGTTPFSSAAALPPGSYAS(ph)LGR ddPTM_A459_MK2206_30min_R2 1 SKVSSSSGTTPFSSAAALPPGSYASLGR 28 1 H0Y5T1;Q7Z460-2;Q7Z460-3;Q7Z460 H0Y5T1;Q7Z460 CLASP1 CLIP-associating protein 1 1 SKVSSSSGTTPFSSAAALPPGS(0.463)YAS(0.537)LGR 96.158 0.00027029 0 8803.2 18438 13341 11055 22461 15688 13084 8401.3 15112 11617 TRUE FALSE 9477.179761 17522.39573 13785.78228 10151.77114 21579.06828 16285.01783 11366.05508 9499.378756 16426.41444 11237.93824 0.84332015 1.559218013 1.226718103 0.903348187 1.920198155 1.449110814 1.011400387 0.845295512 1.461692892 1 13.45608976 -7.269919721 24.04848227 1.06670514 1.332510125 0.111811033 0.325206695 828.1726428 2348510.988 0.135003371 0.092781028 5.37E-08 7.269919721 0.265804985 SKYDEIFYNLAPADGKLS(ph)GSK ddPTM_A459_MK2206_30min_R1 2 SKYDEIFYNLAPADGKLSGSK 21 2 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 SKYDEIFYNLAPADGKLS(0.732)GS(0.268)K;SKYDEIFY(0.001)NLAPADGKLS(0.896)GS(0.104)K 59.342 0.012621 238410000 11601.8 18368.2 15444.6 13652.9 11016.7 9797.6 11260.8 12314.8 12655.6 12302.2 TRUE FALSE 10615.00599 17172.42684 14396.26358 14704.44872 10577.88151 10352.33165 10509.61258 12207.133 13971.19491 13826.28941 0.767740763 1.242012685 1.041223943 1.063513737 0.765055699 0.748742583 0.760118081 0.882892918 1.010480433 1 13.75512641 -6.250144515 24.16233336 0.844681136 1.044765022 0.251904799 0.138485368 569.8329422 1219003 0.040673694 0.051987591 5.62E-07 6.250144515 0.200083886 SKYDEIFYNLAPADGKLS(ph)GSK ddPTM_A459_MK2206_30min_R2 2 SKYDEIFYNLAPADGKLSGSK 21 2 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 SKYDEIFY(0.002)NLAPADGKLS(0.8)GS(0.198)K;SKYDEIFYNLAPADGKLS(0.859)GS(0.141)K 123.19 8.15E-05 18513400 110945 116720 114360 117327 120348 76041 151195 94057 89557 141137 TRUE FALSE 119439.0345 110923.8545 118172.7053 107741.0088 115622.5328 78934.79354 131342.9149 106350.5728 97346.50598 136531.7112 0.874808009 0.812440227 0.865533027 0.789128092 0.846854784 0.578142563 0.961995669 0.778944114 0.712995575 1 17.05887655 -5.767909971 24.80043534 0.798754976 0.847078404 0.020455477 0.113260604 543.1889771 2081940.624 0.030463997 0.046432209 1.71E-06 5.767909971 0.048323428 SLAALDALNT(ph)DDENDEEEYEAWK ddPTM_A459_MK2206_30min_R1 5 SLAALDALNTDDENDEEEYEAWK 23 0 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 SLAALDALNT(1)DDENDEEEYEAWK;S(0.001)LAALDALNT(0.999)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK 196.81 1.39E-22 26715000 17617.13 19289.6 19440.48 15936.15 16724.11 16138.29 17494.42 16793.84 15283.06 15328.96 TRUE FALSE 16118.70058 18033.84353 18120.91438 17163.55503 16057.95328 17052.02603 16327.39916 16647.01323 16871.78878 17228.02729 0.935609185 1.046773564 1.051827587 0.996257711 0.932083112 0.989784016 0.947723084 0.966275067 0.979322153 1 14.07246989 -6.006499955 24.36869607 0.96716751 1.016457494 0.230625663 0.034718249 269.4882053 1010337.22 0.009684393 0.013782772 9.85E-07 6.006499955 0.049289984 SLAASSPPPCS(ph)QPSQCPEEKPQESSPMK ddPTM_A459_MK2206_30min_R2 1 SLAASSPPPCSQPSQCPEEKPQESSPMK 28 1 Q7Z6J9 Q7Z6J9 TSEN54 tRNA-splicing endonuclease subunit Sen54 1 SLAAS(0.006)S(0.014)PPPCS(0.904)QPS(0.074)QCPEEKPQESSPMK 74.408 5.99E-05 7537400 21832 22652 23277 22724 22492 17953 23409 20369 17993 24668 TRUE FALSE 23503.47471 21527.13462 24053.04356 20867.37651 21608.85107 18636.214 20335.37018 23031.29824 19557.99862 23863.08518 0.984930261 0.902110287 1.007960345 0.874462642 0.905534674 0.780964148 0.852168528 0.965143361 0.819592206 1 14.54249296 -5.78358596 24.85379983 0.879058617 0.958711297 0.230969413 0.06554231 301.6758838 338551.9362 0.017935673 0.026627202 1.65E-06 5.78358596 0.07965268 SLADELALVDVLEDK ddPTM_A459_MK2206_30min_R1 1 SLADELALVDVLEDK 15 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;F5H793 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 0 219.89 3.17E-08 51286000 1824.7 1959.5 1619.8 1468.4 1540.2 1529.6 1953.8 1495 1514.8 2070.7 FALSE TRUE 1669.499683 1831.936194 1509.852489 1581.496422 1478.850573 1616.20463 1823.465567 1481.929373 1672.268881 2327.233949 0.717375098 0.7871732 0.648775552 0.679560567 0.635454194 0.694474499 0.783533416 0.636777138 0.718565008 1 11.18440053 -8.576097619 21.31380557 1 0.697927644 0.7570841 0.051067445 3637.471965 1456780.719 0.050385265 0.01300942 2.65E-09 8.576097619 -0.302072356 SLADELALVDVLEDK ddPTM_A459_MK2206_30min_R2 1 SLADELALVDVLEDK 15 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;F5H793 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 0 196.11 0.00045002 2922100 15599 15424 15063 15474 14586 10509 18218 13602 11836 15969 FALSE TRUE 16793.27143 14658.06659 15565.1929 14209.7247 14013.28035 10908.92736 15825.95472 15379.8281 12865.47389 15447.93284 1.087088584 0.94886913 1.007590664 0.919846354 0.907129808 0.706173925 1.02447071 0.995591337 0.832828186 1 13.91512618 -3.908287046 0.821242095 0.911202297 1.609739903 0.231665991 0.090953028 13.68545435 2.477475098 0.033268342 12.1920369 0.000123513 3.908287046 0.698537606 SLAGSS(ph)GPGASSGTSGDHGELVVR ddPTM_A459_MK2206_30min_R1 1 SLAGSSGPGASSGTSGDHGELVVR 24 0 P29692;E9PI39;E9PQ49;E9PK01;P29692-2;E9PRY8;A0A087X1X7;E9PL12;E9PPR1;E9PMW7;E9PIZ1;H0YCK7 P29692 EEF1D Elongation factor 1-delta 1 S(0.004)LAGS(0.19)S(0.723)GPGAS(0.08)S(0.004)GTSGDHGELVVR 125.42 9.58E-08 7684400 4953.6 4445.9 4773.7 4608.4 4526.6 4167.1 4633.6 4875.5 4158.6 3862.4 TRUE FALSE 4532.270308 4156.471102 4449.674544 4963.339766 4346.295937 4403.037601 4324.500998 4832.874018 4590.901352 4340.903272 1.044084612 0.957512951 1.02505729 1.143388704 1.001242291 1.014313687 0.996221461 1.113333727 1.057591258 1 12.08377956 -5.520965185 24.9956187 1.048916554 0.998420356 0.11523699 0.050545273 136.4970208 1782963.943 0.013825945 0.024443428 3.01E-06 5.520965185 -0.050496199 SLAGSSGPGAS(ph)SGTSGDHGELVVR ddPTM_A459_MK2206_30min_R1 1 SLAGSSGPGASSGTSGDHGELVVR 24 0 P29692;E9PI39;E9PQ49;E9PK01;P29692-2;E9PRY8;A0A087X1X7;E9PL12;E9PPR1;E9PMW7;E9PIZ1;H0YCK7 P29692 EEF1D Elongation factor 1-delta 1 SLAGS(0.002)S(0.004)GPGAS(0.932)S(0.062)GTSGDHGELVVR 94.957 0.00062352 0 3217.6 3269.9 2860.9 2480.3 2972.3 2582.5 3228.2 3038.7 2084 2445.7 TRUE FALSE 2943.926224 3057.028916 2666.710079 2671.333136 2853.906997 2728.718918 3012.852668 3012.132966 2300.639258 2748.69178 1.071028132 1.112175959 0.970174284 0.971856195 1.038278289 0.992733684 1.096104223 1.095842389 0.836994266 1 11.42452943 -5.254505461 24.67624131 1.00717017 1.091602051 0.207874694 0.070300606 751.7339315 2675231.678 0.017904279 0.045118546 5.57E-06 5.254505461 0.084431881 SLAGSSGPGAS(ph)SGTSGDHGELVVR ddPTM_A459_MK2206_30min_R2 1 SLAGSSGPGASSGTSGDHGELVVR 24 0 P29692;E9PI39;E9PQ49;E9PK01;P29692-2;E9PRY8;A0A087X1X7;E9PL12;E9PPR1;E9PMW7;E9PIZ1;H0YCK7 P29692 EEF1D Elongation factor 1-delta 1 SLAGSSGPGAS(0.988)S(0.011)GTS(0.001)GDHGELVVR 136.2 3.73E-07 0 7255.1 8385.5 8649.7 9156 11063 11481 11103 9443 9283.9 6905.6 TRUE FALSE 7810.556034 7969.088264 8938.076681 8407.925511 10628.61103 11917.9175 9645.162763 10677.23252 10091.39684 6680.270838 1.169197511 1.192928918 1.337981183 1.258620454 1.591044928 1.784047053 1.443828102 1.598323299 1.510626902 1 12.70569088 -6.250665813 21.79318235 1.53049045 1.243363711 0.265537496 0.194708415 146.4733404 296288.98 0.055021026 0.070062033 5.61E-07 6.250665813 -0.287126739 SLAPDRS(ph)DDEHDPLDNTSRPR ddPTM_A459_MK2206_30min_R1 3 SLAPDRSDDEHDPLDNTSRPR 21 2 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(0.002)LAPDRS(0.998)DDEHDPLDNTSRPR;SLAPDRS(1)DDEHDPLDNTSRPR;S(0.012)LAPDRS(0.983)DDEHDPLDNT(0.002)S(0.002)RPR 83.115 0.00055811 71384000 7997 6966.2 6431.6 6084.6 8826.4 7631 8335.4 7069.9 5781.6 5692.8 TRUE FALSE 7316.813156 6512.699114 5995.040911 6553.236946 8474.825798 8063.060625 7779.360675 7008.08861 6382.61801 6398.067042 1.14359745 1.017916672 0.937008142 1.024252622 1.32459159 1.260233844 1.215892335 1.095344666 0.997585359 1 12.64342039 -4.440084477 20.87936738 1.10697979 3.104311649 0.006994366 0.122440688 2474.372057 639821.2749 0.033104827 5914.428925 3.63E-05 4.440084477 1.997331859 SLAPDRS(ph)DDEHDPLDNTSRPR ddPTM_A459_MK2206_30min_R2 7 SLAPDRSDDEHDPLDNTSRPR 21 2 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(0.32)LAPDRS(0.68)DDEHDPLDNTSRPR;SLAPDRS(1)DDEHDPLDNTSRPR;S(0.016)LAPDRS(0.983)DDEHDPLDNTSRPR;S(0.011)LAPDRS(0.988)DDEHDPLDNT(0.001)S(0.001)RPR;S(0.024)LAPDRS(0.973)DDEHDPLDNT(0.001)S(0.001)RPR;S(0.001)LAPDRS(0.999)DDEHDPLDNTSRPR;S(0.008)LAPDRS(0.992)DDEHDPLDNTSRPR 134.8 4.40E-05 663286000 172315 225929 186035 264699 233526 241964 240421 179926 197489 214511 TRUE FALSE 185507.5689 214709.6944 192237.314 243072.245 224356.5959 251172.1096 208853.4339 203442.946 214666.2362 207511.5236 0.893962733 1.034688053 0.926393439 1.171367453 1.081176563 1.210400778 1.006466678 0.980393486 1.034478628 1 17.66283193 -4.699011175 1.146666185 1.064952163 0.811217103 0.254783336 0.081068594 2.780894048 2.711917832 0.026228093 0.891234927 2.00E-05 4.699011175 -0.25373506 SLAQVEEPAIENVKPPGS(ph)PVAK ddPTM_A459_MK2206_30min_R1 1 SLAQVEEPAIENVKPPGSPVAK 22 1 Q9NXL9-4;Q9NXL9 Q9NXL9-4 MCM9 DNA helicase MCM9 1 SLAQVEEPAIENVKPPGS(1)PVAK 104.18 4.06E-05 32271000 3046.1 3332.8 3159 3018.8 2854.3 2671 2611.3 2383.6 2506.1 2296.9 TRUE FALSE 2787.013199 3115.834114 2944.575881 3251.308499 2740.607187 2822.229712 2437.104942 2362.760437 2766.618063 2581.457313 1.079627846 1.207005864 1.140664177 1.259485672 1.061651174 1.093269952 0.944081054 0.915281622 1.071727218 1 11.33397003 -6.826728699 1.791863687 0.978974478 1.168315588 0.600962644 0.064587179 0.222396343 1.472100473 0.026829199 0.023352214 1.49E-07 6.826728699 0.18934111 SLAQVEEPAIENVKPPGS(ph)PVAK ddPTM_A459_MK2206_30min_R2 2 SLAQVEEPAIENVKPPGSPVAK 22 1 Q9NXL9-4;Q9NXL9 Q9NXL9-4 MCM9 DNA helicase MCM9 1 SLAQVEEPAIENVKPPGS(1)PVAK;SLAQVEEPAIENVKPPGS(1)PVAK 114.1 1.96E-05 26858000 80937 95723 90744 91598 94012 68193 103192 68607 60046 88501 TRUE FALSE 87133.59895 90969.53501 93769.35967 84114.15039 90320.61651 70788.1324 89642.76644 77574.17046 65268.69254 85613.21962 1.017758698 1.062564116 1.095267297 0.982490213 1.054984463 0.826836471 1.047066876 0.906100376 0.76236699 1 16.38554596 -6.739896221 24.98979034 0.911267456 1.043306489 0.415580877 0.079498472 244.9960021 284191.6192 0.026055564 0.026032826 1.82E-07 6.739896221 0.132039033 SLATMDS(ph)PPHQK ddPTM_A459_MK2206_30min_R2 1 SLATMDSPPHQK 12 0 Q14676-3;Q14676;Q14676-2;Q14676-4 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 SLAT(0.003)MDS(0.997)PPHQK 96.247 0.01144 9945800 77273 72230 54196 79625 77707 75349 91180 66238 52437 99187 TRUE FALSE 83189.08029 68643.16323 56002.86759 73119.38279 74655.83273 78216.45899 79207.95647 74895.53403 56997.87548 95950.53631 0.866999638 0.715401559 0.583663935 0.762052883 0.77806582 0.815174797 0.82550822 0.780563996 0.594033944 1 16.55000325 -5.98918572 24.9677725 0.788245747 0.713276161 0.080868406 0.111923701 573.3426111 1323707.975 0.031104418 0.046088042 1.03E-06 5.98918572 -0.074969586 SLCLS(ph)PSEASQMK ddPTM_A459_MK2206_30min_R2 1 SLCLSPSEASQMK 13 0 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 SLCLS(0.46)PS(0.46)EAS(0.081)QMK 98.337 0.047943 3443100 35941 21933 20915 27139 21641 20083 28919 21004 17989 31565 TRUE FALSE 38692.67059 20843.83911 21612.29566 24921.65689 20791.2656 20847.27264 25121.90056 23749.29492 19553.6507 30535.03664 1.267156515 0.682620406 0.707786793 0.81616594 0.680898662 0.682732852 0.822723773 0.777771948 0.640367684 1 14.89817796 -4.757075698 24.99990245 0.747540113 1.267157283 0.698340288 0.10046591 67.01430688 383881.6714 0.023144183 0.177435962 1.75E-05 4.757075698 0.51961717 SLDGAAAVDSADRS(ph)PRPTSAPAITQGQVAEGGVLDASAK ddPTM_A459_MK2206_30min_R1 1 SLDGAAAVDSADRSPRPTSAPAITQGQVAEGGVLDASAK 39 2 P11171;Q4VB86;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y5Z6;A0A2R8Y5G2;A0A2R8Y570;A0A2R8YCW8;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y4N6;A0A2R8YD30;A0A3B3IUD6;A0A2R8Y7Y3;A0A2R8Y7N0;A0A2R8Y420;A0A3B3ITP0;P11171-3;P11171-4;P11171-7;P11171-6;P11171-5;P11171-2 P11171 EPB41 Protein 4.1 1 S(0.199)LDGAAAVDS(0.139)ADRS(0.562)PRPT(0.032)S(0.032)APAIT(0.036)QGQVAEGGVLDASAK 54.994 8.61E-05 12793000 1939.8 1945.9 1671.7 1918.9 1831.2 1949.3 1794.2 1566.8 2032.3 1982.8 TRUE FALSE 1774.809824 1819.221556 1558.229662 2066.69401 1758.259426 2059.667681 1674.512192 1553.101633 2243.564858 2228.444233 0.79643448 0.816363959 0.699245527 0.927415629 0.789007596 0.924262609 0.751426563 0.696944357 1.006785283 1 11.12182114 -8.282002245 24.20681684 1.003392785 0.803700804 0.543952202 0.074386169 478.0146243 562715.9304 0.07078907 0.018373604 5.22E-09 8.282002245 -0.199691981 SLDGAAAVDSADRS(ph)PRPTSAPAITQGQVAEGGVLDASAK ddPTM_A459_MK2206_30min_R2 1 SLDGAAAVDSADRSPRPTSAPAITQGQVAEGGVLDASAK 39 2 P11171;Q4VB86;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y5Z6;A0A2R8Y5G2;A0A2R8Y570;A0A2R8YCW8;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y4N6;A0A2R8YD30;A0A3B3IUD6;A0A2R8Y7Y3;A0A2R8Y7N0;A0A2R8Y420;A0A3B3ITP0;P11171-3;P11171-4;P11171-7;P11171-6;P11171-5;P11171-2 P11171 EPB41 Protein 4.1 1 S(0.008)LDGAAAVDS(0.052)ADRS(0.345)PRPT(0.274)S(0.274)APAIT(0.047)QGQVAEGGVLDASAK 50.644 0.0015811 12334000 15726 13155 15872 18203 11905 13254 16126 12142 13259 13191 TRUE FALSE 16929.99465 12501.74183 16401.16456 16715.75667 11437.54988 13758.39026 14008.63683 13729.00109 14412.24385 12760.57875 1.326741912 0.979715895 1.285299427 1.309952863 0.896319055 1.078194847 1.097805758 1.075891725 1.129434968 1 13.63940614 -6.247505413 24.99172287 1.054241562 1.212153252 0.390472878 0.108880155 971.1881754 1741906.475 0.032222797 0.041383455 5.66E-07 6.247505413 0.15791169 SLDGAEFSRPAS(ph)VSENHDAGPDGDKR ddPTM_A459_MK2206_30min_R2 1 SLDGAEFSRPASVSENHDAGPDGDKR 26 2 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 SLDGAEFS(0.051)RPAS(0.897)VS(0.051)ENHDAGPDGDKR 84.371 3.90E-05 35058000 44136 37469 36463 56257 35404 36838 52572 37455 32071 43174 TRUE FALSE 47515.08609 35608.34395 37678.65822 51660.62314 34013.86107 38239.8959 45669.23325 42350.4971 34860.47761 41765.23592 1.137670722 0.852583331 0.902153607 1.2369288 0.814406056 0.915591522 1.093474806 1.014013118 0.834676899 1 15.35001497 -4.731754832 24.14026021 0.96775165 1.137672269 0.151619142 0.123674584 4801.571899 3904436.365 0.030552713 3.308084719 1.85E-05 4.731754832 0.16992062 SLDGAEFSRPASVS(ph)ENHDAGPDGDKR ddPTM_A459_MK2206_30min_R2 1 SLDGAEFSRPASVSENHDAGPDGDKR 26 2 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 SLDGAEFS(0.002)RPAS(0.274)VS(0.723)ENHDAGPDGDKR 76.156 7.32E-05 40223000 54854 65822 71924 78596 47227 50234 62690 53401 34747 54263 TRUE FALSE 59053.66442 62553.37519 74321.91026 72174.45538 45372.63068 52145.69007 54458.7277 60380.69405 37769.23125 52492.40275 1.1249945 1.191665306 1.415860322 1.374950499 0.864365666 0.993394993 1.037459229 1.150274914 0.71951805 1 15.67982102 -6.259716977 24.99998583 0.973808382 1.280709827 0.58081625 0.131234893 120.2439214 1745290.813 0.040597843 0.049699417 5.50E-07 6.259716977 0.306901445 SLDLFNCEVTNLNDYR ddPTM_A459_MK2206_30min_R1 1 SLDLFNCEVTNLNDYR 16 0 P39687;H0YN26;Q92688-2;Q92688 P39687;Q92688-2 ANP32A;ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member B 0 341.5 1.83E-152 10001000 1346.5 1454.4 1138.6 1505.5 1355.9 1402.6 1576.4 1332.8 1104.6 1297 FALSE TRUE 1231.973104 1359.718296 1061.315004 1621.453871 1301.891632 1482.014 1471.241232 1321.14747 1219.427123 1457.682152 0.845158941 0.932794776 0.728083967 1.112350775 0.893124492 1.016692149 1.009301809 0.906334394 0.83655214 1 10.50946046 -5.752265794 24.99998095 0.964521679 0.845090839 0.32985904 0.086070529 253.2574931 690173.889 0.023122687 0.039337537 1.77E-06 5.752265794 -0.11943084 SLDLLAALPT(ph)PPHNQTEDVR ddPTM_A459_MK2206_30min_R1 2 SLDLLAALPTPPHNQTEDVR 20 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 SLDLLAALPT(1)PPHNQTEDVR;SLDLLAALPT(1)PPHNQTEDVR 130.45 0.0002267 19657600 10573.4 10294.7 10623.1 7049.6 10258 9338.3 11863.1 9688.4 10983.9 11561.7 TRUE FALSE 9674.076807 9624.513159 9902.03357 7592.561413 9849.402138 9867.026476 11071.73424 9603.69534 12125.71571 12994.05068 0.744500467 0.740686134 0.762043631 0.584310589 0.757993206 0.759349545 0.852061802 0.73908403 0.93317442 1 13.66556362 -8.293132189 0.67859684 1.00441339 0.715937319 0.683100025 0.061802069 0.41215296 0.434814748 0.061032648 0.026054515 5.09E-09 8.293132189 -0.288476072 SLDLLAALPT(ph)PPHNQTEDVR ddPTM_A459_MK2206_30min_R2 3 SLDLLAALPTPPHNQTEDVR 20 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 SLDLLAALPT(1)PPHNQTEDVR;SLDLLAALPT(1)PPHNQTEDVR;SLDLLAALPT(1)PPHNQTEDVR 123.55 0.00032223 22464900 55741 57689 55277 64879 55608 58915 66165 47810 53170.5 63288 TRUE FALSE 60008.57382 54824.24815 57119.90759 59578.17816 53424.55051 61157.05161 57477.45602 54058.93116 57795.17398 61222.91774 0.980165207 0.895485713 0.932982447 0.97313523 0.872623398 0.998924159 0.938822554 0.882985215 0.944012081 1 15.90178418 -7.551214341 24.96758133 0.930280007 0.940496798 0 0.04475278 1605.427644 1414587.703 0.020123457 0.011618414 2.81E-08 7.551214341 0.010216792 SLDNNYST(ph)PNER ddPTM_A459_MK2206_30min_R1 2 SLDNNYSTPNER 12 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;C9JZR2;O60716-19;O60716-11;O60716-13;O60716-21;O60716-9;O60716-17;O60716-10;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 SLDNNYS(0.038)T(0.962)PNER;SLDNNYS(0.221)T(0.779)PNER 126.09 0.0065124 40191000 9560.2 8407 8373 8034.2 8653.4 7419 8739.2 8054.3 7691.6 6669.8 TRUE FALSE 8747.054787 7859.702772 7804.664089 8652.995476 8308.716754 7839.057369 8156.223914 7983.882104 8491.169345 7496.105178 1.166879944 1.048504868 1.041162564 1.154332186 1.108404506 1.045750717 1.088061563 1.065070715 1.132744157 1 12.87192548 -10.8033325 3.482963148 0.999716862 1.091294729 0.297034756 0.043375409 4072928.691 2117720.705 8298.617506 0.010342595 1.57E-11 10.8033325 0.091577867 SLDNNYST(ph)PNER ddPTM_A459_MK2206_30min_R2 2 SLDNNYSTPNER 12 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;C9JZR2;O60716-19;O60716-11;O60716-13;O60716-21;O60716-9;O60716-17;O60716-10;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 SLDNNYS(0.003)T(0.997)PNER;SLDNNYS(0.149)T(0.851)PNER 174.46 0.0003318 43770000 86961 83426 73869 91554 83181 81435 89262 66842 68916 72839 TRUE FALSE 93618.80102 79283.18615 76331.75559 84073.74533 79914.89599 84534.06599 77541.79218 75578.4789 74910.18911 70462.2694 1.328637324 1.125186385 1.083299704 1.193173965 1.134151606 1.199706832 1.100472534 1.072609207 1.063124843 1 16.10456332 -1.522878773 0.07856478 0.869063319 1.806127015 0.549630233 0.058530167 174.25734 1.003860854 1.846560087 17.76621141 0.029999998 1.522878773 0.937063696 SLDPENS(ph)ETELER ddPTM_A459_MK2206_30min_R2 1 SLDPENSETELER 13 0 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 SLDPENS(0.991)ET(0.008)ELER 131.72 0.001661 0 8012.6 14063 10855 11556 10544 11331 12860 7961.4 12402 9478.1 TRUE FALSE 8626.050817 13364.65187 11216.90028 10611.83783 10129.98958 11762.20915 11171.46655 9001.982316 13480.70354 9168.830373 0.940801658 1.457617965 1.223373083 1.157381847 1.104828988 1.282847284 1.218417846 0.981802689 1.47027516 1 13.16252199 -10.74680498 4.427501371 0.99993228 1.204067919 0.120924818 0.165129534 0.000113531 1.99E-05 0.148952202 0.036113006 1.79E-11 10.74680498 0.20413564 SLDS(ph)PTSSPGAGTR ddPTM_A459_MK2206_30min_R1 3 SLDSPTSSPGAGTR 14 0 Q9P107;K7EJC2 Q9P107 GMIP GEM-interacting protein 1 SLDS(0.369)PT(0.369)S(0.25)S(0.013)PGAGTR;S(0.005)LDS(0.905)PT(0.048)S(0.032)S(0.01)PGAGTR;S(0.011)LDS(0.505)PT(0.244)S(0.172)S(0.069)PGAGTR 133.04 0.00075887 11696100 5556 4884 4936.6 4319.8 4959.2 5471.2 5065.8 5067.9 4132.39 4189.99 TRUE FALSE 5083.433024 4566.050712 4601.517346 4652.511744 4761.664563 5780.974616 4727.869725 5023.591885 4561.966728 4709.077594 1.079496552 0.96962741 0.977158956 0.987987913 1.011167148 1.227623563 1.003990618 1.066788938 0.968760153 1 12.20122878 -4.435448629 18.49180239 1.028327984 3.19670975 0.045993944 0.073571002 302.9687337 68025.58066 0.018442251 1681.898591 3.67E-05 4.435448629 2.168381766 SLDSDES(ph)EDEEDDYQQKR ddPTM_A459_MK2206_30min_R1 1 SLDSDESEDEEDDYQQKR 18 1 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 S(0.001)LDS(0.055)DES(0.944)EDEEDDYQQKR 63.302 0.019874 2732700 561.5 651.81 724.08 793.38 648.92 507.83 905.06 652.09 719.64 451.29 TRUE FALSE 513.7414764 609.3770505 674.931467 854.4862651 623.0721423 536.5828957 844.6850988 646.3888459 794.4491533 507.1992123 1.012898806 1.201455041 1.330702909 1.684715284 1.228456447 1.05793322 1.665391188 1.274427937 1.5663454 1 8.986408695 -4.972720874 2.413836178 1.368597617 0.998824579 0.184104483 0.221228386 0.600359521 5.789156762 0.057350104 0.393745072 1.06E-05 4.972720874 -0.369773038 SLDSEPSVPSAAKPPS(ph)PEK ddPTM_A459_MK2206_30min_R1 2 SLDSEPSVPSAAKPPSPEK 19 1 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-3;Q7Z3K3-6;Q7Z3K3 Q7Z3K3-5 POGZ Pogo transposable element with ZNF domain 1 SLDSEPSVPSAAKPPS(1)PEK;SLDSEPSVPSAAKPPS(1)PEK 95.344 0.000954 92601000 6525.7 8891.3 9089.6 7583.7 4358.1 3874.1 5733.3 5219.1 8788.6 8366.2 TRUE FALSE 5970.654947 8312.474754 8472.623277 8167.797888 4184.507649 4093.448194 5350.842018 5173.469959 9702.20642 9402.668018 0.634995826 0.884054902 0.901087145 0.868668113 0.445034073 0.435349646 0.56907699 0.550212977 1.031856746 1 13.19885447 -10.96620558 15.30513358 1.000000001 0.694543915 0.168085339 0.198047943 6.77E-09 3.03E-10 0.207452081 0.05031452 1.08E-11 10.96620558 -0.305456086 SLDSEPSVPSAAKPPS(ph)PEK ddPTM_A459_MK2206_30min_R2 6 SLDSEPSVPSAAKPPSPEK 19 1 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-3;Q7Z3K3-6;Q7Z3K3 Q7Z3K3-5 POGZ Pogo transposable element with ZNF domain 1 SLDSEPSVPS(0.001)AAKPPS(0.999)PEK;SLDSEPSVPS(0.005)AAKPPS(0.995)PEK;SLDSEPSVPSAAKPPS(1)PEK;SLDSEPSVPSAAKPPS(1)PEK;SLDSEPSVPS(0.001)AAKPPS(0.999)PEK;SLDSEPSVPSAAKPPS(1)PEK 97.352 0.00085367 447389200 469844 404489 458062 345585 349823 216488.7 485465 360300 267072.2 483204 TRUE FALSE 505815.6179 384402.6644 473333.5585 317349.6 336087.1913 224727.3292 421722.8624 407392.4471 290301.6572 467437.0931 1.082104149 0.822362346 1.012614458 0.678914029 0.718999832 0.480764861 0.90220239 0.87154497 0.62104968 1 18.8344127 -5.760273044 24.99870532 0.741414132 0.957360544 0.298008272 0.15275025 39.13385456 838733.7258 0.041715582 0.067383726 1.74E-06 5.760273044 0.215946412 SLDSESIS(ph)PGDFHR ddPTM_A459_MK2206_30min_R1 1 SLDSESISPGDFHR 14 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 SLDS(0.001)ES(0.02)IS(0.979)PGDFHR 79.514 0.023734 4946000 2636.3 1999.7 2679.7 2317.9 2373.9 2709.8 2946.8 2440.4 2415.3 1972.3 TRUE FALSE 2412.068841 1869.519167 2497.80943 2496.42506 2279.342536 2863.226534 2750.224349 2419.06384 2666.379078 2216.643414 1.088162772 0.843400952 1.126843142 1.126218608 1.028285615 1.291694693 1.240715729 1.091318443 1.202890398 1 11.11416099 -5.401705103 7.334527935 1.148032752 0.966630322 0.316856145 0.101088936 0.26914631 14.97607408 0.02597968 0.054403473 3.97E-06 5.401705103 -0.18140243 SLDSESIS(ph)PGDFHR ddPTM_A459_MK2206_30min_R2 1 SLDSESISPGDFHR 14 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 SLDSES(0.001)IS(0.999)PGDFHR 119.46 0.0014616 3397200 21223 23230 19830 25575 27580 22812 25468 20415 23633 22009 TRUE FALSE 22847.8492 22076.43198 20491.1223 23485.44069 26497.07062 23680.12665 22124.02101 23083.3106 25688.55562 21290.84813 1.073130063 1.036897724 0.962438047 1.103076803 1.244528656 1.112220918 1.039132911 1.08418934 1.206553889 1 14.3779458 -5.91995497 8.640760358 1.120068339 1.025966355 0.241055039 0.071882868 0.389584575 37.77565662 0.020656198 0.030707471 1.20E-06 5.91995497 -0.094101983 SLEAEILQLQEELAS(ph)SER ddPTM_A459_MK2206_30min_R1 1 SLEAEILQLQEELASSER 18 0 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 1 SLEAEILQLQEELAS(0.5)S(0.5)ER 65.234 0.033768 1901300 631.16 887.3 851.85 897.61 726.86 805.85 767.36 499.62 526.42 445.5 TRUE FALSE 577.4765276 829.5366087 794.0287954 966.7440777 697.907627 851.4765306 716.1708145 495.251875 581.1432428 500.6919034 1.153357032 1.656780553 1.585863063 1.930816279 1.393886385 1.70059976 1.430362284 0.989134978 1.160680328 1 8.967779316 -7.634952928 4.089645104 1.057122765 1.582479852 0.584789982 0.195497789 0.153683371 4.660823514 0.097528092 0.053233741 2.32E-08 7.634952928 0.525357087 SLEDQVEMLR ddPTM_A459_MK2206_30min_R1 1 SLEDQVEMLR 10 0 K7ELL7;P14314-2;P14314 K7ELL7 PRKCSH Glucosidase 2 subunit beta 0 168.27 0.040035 5727200 2014.2 2015.3 1946.8 1724.5 2242.5 1920.8 2037.9 1771.8 1695.3 1622 FALSE TRUE 1842.881713 1884.103604 1814.65664 1857.321289 2153.176476 2029.554036 1901.955409 1756.309339 1871.532502 1822.945605 1.010936205 1.033548998 0.995452983 1.018857218 1.181152345 1.113337683 1.043341833 0.963445829 1.02665296 1 10.8320558 -7.588283314 7.30358834 0.996980573 1.060190836 0.21353297 0.053395995 0.401629596 37.43535965 0.028400312 0.016304695 2.58E-08 7.588283314 0.063210263 SLEEAIQFINQR ddPTM_A459_MK2206_30min_R2 1 SLEEAIQFINQR 12 0 P30838;A8MYB8;C9JMC5;I3L3I9;E9PNN6 P30838 ALDH3A1 "Aldehyde dehydrogenase, dimeric NADP-preferring" 0 163.84 0.0069887 2488000 11540 14004 10284 12382 10404 11087 11282 9228.2 11627 11979 FALSE TRUE 12423.51127 13308.58172 10626.86343 11370.35099 9995.486684 11508.92355 9800.659848 10434.35743 12638.29544 11588.12621 1.072089745 1.148467102 0.917047608 0.981207038 0.862562808 0.993165189 0.845750182 0.900435259 1.090624594 1 13.50035968 -5.264318891 24.98711707 0.941267801 1.11027843 0.449335591 0.071087387 189.4632043 1644091.613 0.017860854 0.040040083 5.44E-06 5.264318891 0.169010629 SLEEIYLFSLPIK ddPTM_A459_MK2206_30min_R1 1 SLEEIYLFSLPIK 13 0 P15880;H0YEN5;E9PQD7;E9PMM9;E9PPT0;H3BNG3;H0YE27 P15880 RPS2 40S ribosomal protein S2 0 139.15 0.013157 10998000 2079.3 2206 1721.9 2224.9 2161.1 2090 1998.7 2033.2 1301.1 1797.2 FALSE TRUE 1902.444616 2062.388999 1605.022225 2396.262184 2075.018811 2208.333994 1865.37037 2015.423947 1436.354001 2019.850704 0.941873878 1.021060118 0.794624188 1.18635609 1.027312963 1.093315456 0.923518934 0.997808374 0.711118895 1 10.98003295 -8.071190664 24.70628393 0.855193222 1.000292243 0.191073881 0.117374234 218.9173378 75971.56159 0.076381416 0.028869477 8.49E-09 8.071190664 0.145099021 SLEETVS(ph)ASEEENVGHQQAGNVK ddPTM_A459_MK2206_30min_R2 1 SLEETVSASEEENVGHQQAGNVK 23 0 E5RI52;B7Z1T6;Q6NTE8-2;Q6NTE8 E5RI52 C5orf45 UPF0544 protein C5orf45 1 S(0.017)LEET(0.152)VS(0.646)AS(0.185)EEENVGHQQAGNVK 47.331 0.042831 5044500 8623.6 8589 10146 11559 11281 11304 10578 9188.4 9610.1 9567.5 TRUE FALSE 9283.829446 8162.48275 10484.26258 10614.59272 10838.05126 11734.18164 9189.095894 10389.35543 10445.96913 9255.313259 1.003081061 0.881923985 1.132783114 1.146864771 1.171008582 1.267831927 0.992845476 1.122528772 1.128645658 1 13.17606611 -5.272472227 24.48953911 1.128164454 0.942502525 0.439741616 0.079889002 411.2327632 912811.8441 0.020688823 0.043748391 5.34E-06 5.272472227 -0.185661929 SLENETLNKEEDCHS(ph)PTSKPPKPDQPLK ddPTM_A459_MK2206_30min_R1 1 SLENETLNKEEDCHSPTSKPPKPDQPLK 28 3 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SLENET(0.002)LNKEEDCHS(0.661)PT(0.169)S(0.169)KPPKPDQPLK 55.247 0.0051291 35358000 4387.1 4566.6 4409 4041.3 3817.5 2878.8 3344.3 3747.9 3510.7 3387.4 TRUE FALSE 4013.954107 4269.31351 4109.729364 4352.561626 3665.440891 3041.795168 3121.207849 3715.132505 3875.649828 3807.056686 1.054345769 1.121421051 1.079503066 1.143287843 0.962801764 0.798988673 0.81984801 0.975854265 1.018017368 1 11.89446034 -6.401389244 4.839363174 0.911496425 1.098722689 0.585142491 0.070449045 0.16630735 5.8700076 0.0239315 0.027116364 3.97E-07 6.401389244 0.187226264 SLENETLNKEEDCHS(ph)PTSKPPKPDQPLK ddPTM_A459_MK2206_30min_R2 4 SLENETLNKEEDCHSPTSKPPKPDQPLK 28 3 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.007)LENET(0.063)LNKEEDCHS(0.609)PT(0.161)S(0.161)KPPKPDQPLK;SLENET(0.005)LNKEEDCHS(0.959)PT(0.018)S(0.018)KPPKPDQPLK;SLENETLNKEEDCHS(0.7)PT(0.15)S(0.15)KPPKPDQPLK;SLENET(0.008)LNKEEDCHS(0.686)PT(0.137)S(0.169)KPPKPDQPLK 77.689 5.98E-05 235026300 598184 635552 614387 639629 668592 402832 812423 608716 508377 683642 TRUE FALSE 643981.427 603991.4119 634870.3559 587369.2646 642339.7187 418162.054 705750.8842 688277.2712 552594.7125 661334.8175 0.973760053 0.913291416 0.959983263 0.888157177 0.971277637 0.632300074 1.06716124 1.040739506 0.835574807 1 19.33502133 -10.42837845 5.311498062 1.000000121 0.921166054 0.040822724 0.115895423 160107512.4 25.6498567 237.1292204 0.027743457 3.73E-11 10.42837845 -0.078834067 SLENPT(ph)PPFTPK ddPTM_A459_MK2206_30min_R1 1 SLENPTPPFTPK 12 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 S(0.003)LENPT(0.939)PPFT(0.058)PK 115.06 0.012507 8461600 6389.5 6220.5 6180.7 5635.9 5166.5 4362.8 4915.6 5371.9 5788.1 4785.9 TRUE FALSE 5846.039472 5815.544319 5761.171304 6069.977995 4960.707365 4609.817966 4587.689293 5324.934045 6389.793708 5378.813424 1.086864149 1.081194654 1.071085916 1.128497592 0.922267975 0.857032509 0.852918466 0.989983036 1.187956005 1 12.39307223 -6.262640789 24.91874989 0.956520398 1.08965768 0.308175064 0.089615833 133.2777545 2764343.527 0.029478457 0.035283341 5.46E-07 6.262640789 0.133137283 SLENPT(ph)PPFTPK ddPTM_A459_MK2206_30min_R2 1 SLENPTPPFTPK 12 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 SLENPT(0.999)PPFT(0.001)PK 149.32 0.0013544 15585000 163330 178960 173140 182650 191100 149580 195720 142460 142700 191130 TRUE FALSE 175834.6704 170073.1066 178912.4012 167726.9107 183596.4538 155272.3717 170021.7289 161080.0111 155111.7881 184893.4438 0.951005438 0.919843901 0.967651408 0.907154452 0.992985203 0.839793822 0.919566024 0.871204559 0.838925302 1 17.49633454 -6.761617268 25 0.887452487 0.945031716 0.229477901 0.048481389 6.558773002 921673.5753 0.015420773 0.014476074 1.73E-07 6.761617268 0.057579229 SLENPTPPFT(ph)PK ddPTM_A459_MK2206_30min_R2 1 SLENPTPPFTPK 12 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 SLENPTPPFT(1)PK 148.85 0.0013839 11547000 48601 51382 51227 57733 59116 51677 62067 40421 46962 61836 TRUE FALSE 52321.92993 48830.4446 52934.88261 53016.02922 56794.80881 53643.60445 53917.52834 45704.16349 51046.66987 59818.29638 0.874681044 0.81631286 0.884927954 0.886284505 0.949455472 0.896775864 0.901355131 0.764049902 0.853362148 1 15.8682992 -11.94778698 2.255264057 2.180902247 0.870022833 0.400154477 0.047862186 6498681.331 962128.9457 38792945.4 0.013723175 1.13E-12 11.94778698 -1.310879413 SLENYHFVDEHGK ddPTM_A459_MK2206_30min_R2 1 SLENYHFVDEHGK 13 0 Q14677-2;Q14677;Q14677-3 Q14677-2 CLINT1 Clathrin interactor 1 0 111.79 0.0028936 2934500 19045 20658 20172 21816 22928 17014 27186 19394 17172 20572 FALSE TRUE 20503.09984 19632.15376 20844.52441 20033.56301 22027.73152 17661.47969 23616.44554 21928.86239 18665.58952 19900.73732 1.030268352 0.986503838 1.04742473 1.00667441 1.10688017 0.88747866 1.186712088 1.101912056 0.937934571 1 14.28053426 -7.266053803 24.99964611 1.065132335 1.015598804 0.067654856 0.079660021 1101.594301 5968081.5 0.031815919 0.02219601 5.42E-08 7.266053803 -0.049533532 SLEPEES(ph)PGKR ddPTM_A459_MK2206_30min_R1 1 SLEPEESPGKR 11 1 Q5JWZ0;Q5JXL1;Q9BVI0 Q5JWZ0 PHF20 PHD finger protein 20 1 SLEPEES(1)PGKR 113.07 0.013127 5622600 3896 4432.3 4032.6 3117.2 2985.9 2921.5 3079.2 3108 3508.8 3082.7 TRUE FALSE 3564.624741 4143.756464 3758.878347 3357.287284 2866.96528 3086.912805 2873.792186 3080.827084 3873.552316 3464.608149 1.028868082 1.196024568 1.084936069 0.969023664 0.827500588 0.890984686 0.829471058 0.889228147 1.118034753 1 11.75847648 -5.80540234 3.327988114 0.912926787 1.117475469 0.437426735 0.089253466 0.198743153 4.501596312 0.025931628 0.043058189 1.57E-06 5.80540234 0.204548682 SLEPEES(ph)PGKR ddPTM_A459_MK2206_30min_R2 1 SLEPEESPGKR 11 1 Q5JWZ0;Q5JXL1;Q9BVI0 Q5JWZ0 PHF20 PHD finger protein 20 1 SLEPEES(1)PGKR 73.877 0.028992 15523000 32619 32257 24142 31190 37613 26610 34449 29373 25260 32166 TRUE FALSE 35116.33572 30655.16429 24946.88223 28641.67723 36136.12463 27622.6622 29925.80492 33212.15195 27457.06914 31116.42605 1.128546564 0.985176261 0.801727107 0.920468089 1.161319895 0.887719629 0.961736572 1.067351112 0.882397904 1 14.92538875 -4.780255654 4.96875266 0.961683127 1.136767629 0.214651876 0.095733823 0.257646617 15.93532935 0.024210594 0.150702154 1.66E-05 4.780255654 0.175084503 SLEPEPQQSLEDGS(ph)PAKGEPSQAWR ddPTM_A459_MK2206_30min_R1 1 SLEPEPQQSLEDGSPAKGEPSQAWR 25 1 Q8IV36-3;Q8IV36-2;Q8IV36 Q8IV36-3 HID1 Protein HID1 1 SLEPEPQQS(0.014)LEDGS(0.984)PAKGEPS(0.001)QAWR 66.479 0.0010975 4813100 687.5 521.89 725.18 601.63 633.8 488.96 500.19 522.08 533.75 394.34 TRUE FALSE 629.0245148 487.9148661 675.9568021 647.9676468 608.5544039 516.6444926 466.8232377 517.5155096 589.2352225 443.1938163 1.419298942 1.100906304 1.52519457 1.462041263 1.373111225 1.165730373 1.053316225 1.167695691 1.329520406 1 8.791793942 -6.775654087 5.902568173 1.146645678 1.374573996 0.441888729 0.130936836 0.171136826 20.11406686 0.0467244 0.042969404 1.68E-07 6.775654087 0.227928319 SLEPEPQQSLEDGS(ph)PAKGEPSQAWR ddPTM_A459_MK2206_30min_R2 1 SLEPEPQQSLEDGSPAKGEPSQAWR 25 1 Q8IV36-3;Q8IV36-2;Q8IV36 Q8IV36-3 HID1 Protein HID1 1 SLEPEPQQS(0.001)LEDGS(0.999)PAKGEPSQAWR 102.46 1.11E-06 8579300 15113 19314 18436 13891 22109 15063 20528 18356 17153 15932 TRUE FALSE 16270.0629 18354.89485 19050.64704 12756.06086 21240.88957 15636.23302 17832.64894 20755.19223 18644.93693 15412.14014 1.055665388 1.190937448 1.236080574 0.827663176 1.378192086 1.014540023 1.157052088 1.34667814 1.209756514 1 13.91177959 -7.532053967 24.83978524 1.217303418 1.121404218 0.025143391 0.158103272 546.0176595 1478192.327 0.070447896 0.040745455 2.94E-08 7.532053967 -0.0958992 SLESLADGGS(ph)ASPIKDQPVMAVK ddPTM_A459_MK2206_30min_R2 1 SLESLADGGSASPIKDQPVMAVK 23 1 A0A3B3ITU7;Q9HB96 A0A3B3ITU7 FANCE Fanconi anemia group E protein 1 SLES(0.002)LADGGS(0.591)AS(0.407)PIKDQPVMAVK 100.67 0.00074007 0 22173 28995 24012 21436 25579 19052 22492 21992 19166 24029 TRUE FALSE 23870.58193 27555.15046 24812.5481 19684.61023 24574.63994 19777.03721 19538.77338 24866.42991 20833.02404 23244.9357 1.026915378 1.185425971 1.067438879 0.846834359 1.05720404 0.850810579 0.84056044 1.069756881 0.896239263 1 14.50462881 -5.596504914 6.774739743 0.938085138 1.111139514 0.408355501 0.086742651 0.186774602 13.81854036 0.022836231 0.039899974 2.53E-06 5.596504914 0.173054376 SLESS(ph)KEIPEQR ddPTM_A459_MK2206_30min_R1 1 SLESSKEIPEQR 12 1 Q9BXY4;Q9BXY4-2 Q9BXY4 RSPO3 R-spondin-3 1 SLES(0.046)S(0.954)KEIPEQR 193.45 0.00073912 10940000 4366.1 5117.5 3577.3 4057 3856.5 3250.6 2913.8 2625.7 3426.2 3437.9 TRUE FALSE 3994.740268 4784.34982 3334.482843 4369.470843 3702.887439 3434.646163 2719.425719 2602.743782 3782.365751 3863.813007 1.033885507 1.238245694 0.863003162 1.130870163 0.958350581 0.888926601 0.703819184 0.673620534 0.978920497 1 11.91580956 -6.680822905 2.313658199 0.812475186 1.064106291 0.366737245 0.131830278 0.287033858 3.143870931 0.048610144 0.047224441 2.09E-07 6.680822905 0.251631105 SLETENR ddPTM_A459_MK2206_30min_R2 1 SLETENR 7 0 P05783;F8VZY9;CON__P05784 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 143.11 0.045242 30705000 158360 187950 181420 243380 198710 207300 227970 219140 214120 197160 FALSE TRUE 170484.1634 178616.6763 187468.4523 223495.0755 190907.647 215188.9468 198037.2652 247782.3504 232743.7706 190726.6853 0.893866336 0.936505953 0.982916742 1.171808104 1.000948801 1.1282582 1.038330136 1.299148832 1.220299981 1 17.54114719 -5.072570034 0.549816731 1.157250623 0.752481579 0.449532101 0.092631592 2.749073839 0.79484479 0.055868073 0.684037665 8.46E-06 5.072570034 -0.404769044 SLETSSALS(ph)PSLK ddPTM_A459_MK2206_30min_R1 1 SLETSSALSPSLK 13 0 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 SLETSS(0.011)ALS(0.654)PS(0.335)LK 171.99 0.00018727 3571400 2087.8 2076.8 1851.4 1913.8 1736.8 1809.5 1812 1838.4 1629.2 1324.9 TRUE FALSE 1910.221647 1941.599943 1725.732126 2061.201208 1667.619578 1911.952326 1691.124786 1822.327063 1798.56117 1489.038614 1.282855681 1.303928537 1.158957269 1.384249668 1.119930378 1.284017961 1.13571587 1.223827942 1.20786738 1 10.54016545 -14.52287875 0.13850986 0.194428832 1.318371972 0.507631569 0.073762151 109.6034391 0.93091203 24.31676086 0.435116538 3.00E-15 14.52287875 1.12394314 SLETSSALSPS(ph)LK ddPTM_A459_MK2206_30min_R2 1 SLETSSALSPSLK 13 0 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 SLETSS(0.001)ALS(0.284)PS(0.715)LK 149.82 0.00050901 4206100 50628 62742 45658 55104 57579 45101 57817 37086 43978 57672 TRUE FALSE 54504.11861 59626.32352 47180.21493 50601.82693 55318.15915 46817.35016 50225.55845 41933.26754 47803.12695 55790.16736 0.976948469 1.068760435 0.845672583 0.907002601 0.991539581 0.839168484 0.90025825 0.751624695 0.856837848 1 15.76772326 -5.127449266 0.643247968 0.86421848 1.079873088 0.225174306 0.079446716 3.079989016 1.299427331 0.039762249 0.458312543 7.46E-06 5.127449266 0.215654608 SLEVHCPS(ph)TPK ddPTM_A459_MK2206_30min_R2 1 SLEVHCPSTPK 11 0 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 SLEVHCPS(0.564)T(0.436)PK 71.548 0.041743 5926700 66954 71711 73923 66643 77361 66146 85850 65315 66402 68751 TRUE FALSE 72080.04972 68149.93602 76387.55592 61198.05372 74323.41843 68663.23238 74577.79188 73851.89476 72177.52593 66507.6605 1.083785675 1.024693028 1.148552743 0.920165486 1.117516657 1.032410881 1.121341381 1.110426892 1.085251314 1 16.0212329 -7.249431863 24.30771902 1.08845714 1.054195517 0.025877304 0.06518929 1610.186508 3259621.832 0.023656345 0.018168872 5.63E-08 7.249431863 -0.034261624 SLFS(ph)PQNTLAAPTGHPPTSGVEK ddPTM_A459_MK2206_30min_R1 1 SLFSPQNTLAAPTGHPPTSGVEK 23 0 Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.057)LFS(0.72)PQNT(0.222)LAAPTGHPPTSGVEK 98.23 4.03E-05 22231000 7717.2 5713 6929.6 5327 7827.7 6497 7270.7 6918.9 5542.2 5133.8 TRUE FALSE 7060.811615 5341.082662 6459.238059 5737.286463 7515.906134 6864.854525 6785.684869 6858.408787 6118.331523 5769.813902 1.223750321 0.925694096 1.11948811 0.99436248 1.302625398 1.189787858 1.176066505 1.18867071 1.060403616 1 12.49430907 -4.448016176 23.16076326 1.117404159 6.986070756 0.088112443 0.108164525 1924.326824 612381.3703 0.026523728 16923.1383 3.56E-05 4.448016176 5.868666597 SLFS(ph)PQNTLAAPTGHPPTSGVEK ddPTM_A459_MK2206_30min_R2 2 SLFSPQNTLAAPTGHPPTSGVEK 23 0 Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.011)LFS(0.912)PQNT(0.077)LAAPTGHPPTSGVEK;S(0.009)LFS(0.834)PQNT(0.157)LAAPTGHPPTSGVEK 169.23 1.68E-12 38311000 93073 122117 102334 135570 116845 111378 131425 93237 92611 116012 TRUE FALSE 100198.7404 116052.8474 105745.7645 124493.4973 112257.0782 115616.5678 114168.7396 105423.396 100666.1374 112226.5379 0.892825728 1.034094515 0.942252754 1.109305336 1.00027213 1.030207026 1.017306082 0.939380275 0.896990491 1 16.77605434 -7.766876338 24.67154725 0.938639004 1.007497021 0.166068556 0.058858442 174.8316615 793320.1263 0.029932961 0.015036323 1.71E-08 7.766876338 0.068858017 SLGEKS(ph)PAASGAR ddPTM_A459_MK2206_30min_R1 2 SLGEKSPAASGAR 13 1 O75683 O75683 SURF6 Surfeit locus protein 6 1 SLGEKS(0.992)PAAS(0.008)GAR;SLGEKS(1)PAASGAR 166.52 0.0015659 9386000 3324.9 3201.4 3348.2 3180.8 2873.5 3053.8 3135.5 3396.8 2560.86 2212.22 TRUE FALSE 3042.099795 2992.988278 3120.933513 3425.785767 2759.04241 3226.703517 2926.336516 3367.102136 2827.070561 2486.286515 1.223551581 1.203798621 1.255258995 1.37787248 1.109704128 1.297800353 1.176990865 1.354269556 1.137065477 1 11.27977684 -8.533108601 9.263570943 1.000001025 1.247250457 0.518968263 0.075789406 0.182279998 157.5170076 0.068674189 0.01774065 2.93E-09 8.533108601 0.247249432 SLGEKS(ph)PAASGAR ddPTM_A459_MK2206_30min_R2 2 SLGEKSPAASGAR 13 1 O75683 O75683 SURF6 Surfeit locus protein 6 1 SLGEKS(0.998)PAAS(0.002)GAR;SLGEKS(1)PAASGAR 108.06 0.0304 10981000 21805 24347 23043 25014 24042 19145.9 22310.7 16660.5 19143.9 22245 TRUE FALSE 23474.40757 23137.96338 23811.24212 22970.27618 23097.99028 19874.51064 19381.27829 18838.08455 20809.00182 21519.14747 1.090861411 1.075226768 1.106514194 1.067434303 1.073369208 0.923573328 0.900652701 0.875410356 0.966999359 1 14.3933333 -6.750320468 5.878995749 0.92290075 1.083617607 0.826837794 0.034029074 0.059011541 6.994993219 0.011283525 0.010743484 1.78E-07 6.750320468 0.160716856 SLGGES(ph)SGGTTPVGSFHTEAAR ddPTM_A459_MK2206_30min_R2 1 SLGGESSGGTTPVGSFHTEAAR 22 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 S(0.018)LGGES(0.553)S(0.428)GGTTPVGSFHTEAAR 134 1.29E-05 15355000 9623.6 23201 11204 25993 25845 28033 29517 20673 21654 14609 TRUE FALSE 10360.39022 22048.87208 11577.53577 23869.28875 24830.19544 29099.81546 25641.38244 23375.03208 23537.42578 14132.30953 0.733099583 1.560174721 0.819224611 1.688987119 1.756980725 2.059098366 1.81438019 1.654013595 1.665504547 1 13.78670963 -5.781031591 22.94148237 1.716724164 1.089767498 0.425176575 0.32727432 78.59649277 92032.16361 0.087221277 0.129665961 1.66E-06 5.781031591 -0.626956667 SLGGESS(ph)GGTTPVGSFHTEAAR ddPTM_A459_MK2206_30min_R2 2 SLGGESSGGTTPVGSFHTEAAR 22 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 S(0.018)LGGES(0.309)S(0.664)GGT(0.008)T(0.001)PVGSFHTEAAR;SLGGES(0.031)S(0.969)GGTTPVGSFHTEAAR 172.5 3.75E-12 18290000 15776 35592 26462 50257 41695 54347 39796 30086 41538 24632 TRUE FALSE 16983.82269 33824.55304 27344.22987 46150.84234 40057.8448 56415.21317 34570.7374 34018.3435 45150.90016 23828.25986 0.712759672 1.419514192 1.147554628 1.936811274 1.681106595 2.367575874 1.450829293 1.427646992 1.894846725 1 14.54038598 -5.745698587 23.96729491 1.716816995 1.125899363 0.331627092 0.378207997 168.5670139 256660.208 0.100127731 0.172559457 1.80E-06 5.745698587 -0.590917632 SLGGIS(ph)PSEDR ddPTM_A459_MK2206_30min_R1 1 SLGGISPSEDR 11 0 H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BMM1;H3BV44 H3BRD5 MYO9A Unconventional myosin-IXa 1 SLGGIS(0.928)PS(0.072)EDR 112.84 0.0074384 4110100 2161.3 2507.7 2442 2156.6 2185.5 2425.3 2738.3 2352.5 2196.3 2520.1 TRUE FALSE 1977.470086 2344.448274 2276.243844 2322.701706 2098.446907 2562.61839 2555.633003 2331.932341 2424.613245 2832.309014 0.698183029 0.827751585 0.803670727 0.820073549 0.740896172 0.90478065 0.902314328 0.823332599 0.856055336 1 11.46776296 -14.52287875 0.029292494 2.080887875 0.089644686 0.638990802 0.048798849 1044.384247 2.295637446 120.6067447 49.78033611 3.00E-15 14.52287875 -1.991243189 SLGGIS(ph)PSEDR ddPTM_A459_MK2206_30min_R2 2 SLGGISPSEDR 11 0 H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BMM1;H3BV44 H3BRD5 MYO9A Unconventional myosin-IXa 1 S(0.002)LGGIS(0.724)PS(0.274)EDR;SLGGIS(0.805)PS(0.195)EDR 151.55 0.00059399 6029800 43104 45691 51580 47246 55122 50230 55138 44596 44667 52578 TRUE FALSE 46404.07538 43422.05138 53299.65146 43385.85067 52957.63331 52141.53785 47898.31437 50424.85032 48552.05492 50862.38417 0.912345659 0.853716398 1.047918857 0.853004659 1.041194474 1.025149306 0.941723735 0.991397693 0.954576859 1 15.63431147 -5.246306235 24.99293097 0.979191666 0.883031021 0.335006931 0.055599865 914.7965435 1510813.22 0.013554857 0.035560869 5.67E-06 5.246306235 -0.096160645 SLGGIS(ph)PSEDRR ddPTM_A459_MK2206_30min_R1 1 SLGGISPSEDRR 12 1 H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BMM1;H3BV44 H3BRD5 MYO9A Unconventional myosin-IXa 1 SLGGIS(0.669)PS(0.331)EDRR 98.253 0.0079336 5118300 2436.3 2129.2 2344.9 1818 2081.8 2098.8 2202.3 1983 1611.8 1503.5 TRUE FALSE 2229.079891 1990.588693 2185.734721 1958.022675 1998.877498 2217.632242 2055.388585 1965.66284 1779.352378 1689.764931 1.319165673 1.178026989 1.293514075 1.158754475 1.182932289 1.312390973 1.216375454 1.163275911 1.053017698 1 10.72260685 -8.203021815 1.796440246 1.001882187 1.235634926 0.714403609 0.053380056 0.186335545 1.090226155 0.04842409 0.014614201 6.27E-09 8.203021815 0.233752739 SLGGIS(ph)PSEDRR ddPTM_A459_MK2206_30min_R2 1 SLGGISPSEDRR 12 1 H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BMM1;H3BV44 H3BRD5 MYO9A Unconventional myosin-IXa 1 S(0.019)LGGIS(0.893)PS(0.088)EDRR 63.894 0.042615 9316400 24706 49656 38435 51057 43621 51821 32054 27770 45758 31041 TRUE FALSE 26597.51036 47190.15525 39716.40372 46885.47978 41908.22036 53793.08447 27845.2713 31399.63435 49737.94813 30028.13471 0.885752998 1.571531355 1.322639721 1.561385022 1.395631822 1.791422777 0.92730606 1.045673821 1.656378213 1 14.87402724 -10.83808812 4.440314294 0.999712389 1.355551645 0.112516182 0.295349592 211318424.6 356.9764165 699423.0846 0.070466116 1.45E-11 10.83808812 0.355839256 SLGGISPS(ph)EDR ddPTM_A459_MK2206_30min_R1 1 SLGGISPSEDR 11 0 H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BMM1;H3BV44 H3BRD5 MYO9A Unconventional myosin-IXa 1 SLGGIS(0.117)PS(0.883)EDR 86.463 0.033429 4310500 2418 2793.3 2823.1 2147.4 2058.2 2460 2964.7 2416.2 3283.7 3352.3 TRUE FALSE 2212.336403 2611.455662 2631.475838 2312.79312 1976.217536 2599.283074 2766.930272 2395.075418 3625.052366 3767.608233 0.587199164 0.693133548 0.698447311 0.613862423 0.524528405 0.689902695 0.734399678 0.635701822 0.962162768 1 11.87943324 -8.286618274 5.270222622 0.991266581 0.648988665 0.837493416 0.058859942 0.074533657 6.143903784 0.055850911 0.015822937 5.17E-09 8.286618274 -0.342277916 SLGGISPS(ph)EDR ddPTM_A459_MK2206_30min_R2 1 SLGGISPSEDR 11 0 H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BMM1;H3BV44 H3BRD5 MYO9A Unconventional myosin-IXa 1 SLGGIS(0.027)PS(0.973)EDR 140.01 0.0011217 6538700 47989 52357 48837 58168 60831 58212 60161 45384 46428 55930 TRUE FALSE 51663.07474 49757.02751 50465.20121 53415.48833 58442.46929 60427.29845 52261.78843 51315.84463 50466.22352 54105.00868 0.954866767 0.919638102 0.932726977 0.987255887 1.080167451 1.116852209 0.965932539 0.94844906 0.932745872 1 15.72347453 -5.855684118 4.402463244 1.010058275 0.934091251 0.259459012 0.053742317 0.320075751 11.05532278 0.017588907 0.027178638 1.39E-06 5.855684118 -0.075967024 SLGGQQGS(ph)PK ddPTM_A459_MK2206_30min_R1 1 SLGGQQGSPK 10 0 A0A0C4DGT3;A0A3B3IU98;A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695 A0A0C4DGT3;A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 SLGGQQGS(1)PK 107.39 0.011322 13300000 5731.2 6422.7 5562.5 5436.2 3843.4 3141.8 5048.3 5560.4 1183.2 4763.1 TRUE FALSE 5243.731344 6004.581063 5184.932998 5854.897066 3690.309239 3319.686001 4711.537118 5511.786009 1306.197874 5353.188788 0.979552852 1.121683038 0.968569054 1.093721387 0.689366541 0.620132436 0.880136551 1.029626682 0.244003701 1 12.38618282 -6.260923809 24.99998144 0.745984665 1.041487943 0.31879648 0.212677061 57.8005983 2802744.229 0.062347183 0.075647088 5.48E-07 6.260923809 0.295503278 SLGGQQGS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SLGGQQGSPK 10 0 A0A0C4DGT3;A0A3B3IU98;A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695 A0A0C4DGT3;A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 SLGGQQGS(1)PK;SLGGQQGS(1)PK 96.23 0.021921 73449000 328830 279300 299970 267990 267860 180775 345240 246980 226280 336220 TRUE FALSE 354005.4776 265430.3681 309970.8501 246094.3597 257342.4705 187654.5193 299909.5733 279261.134 245961.4254 325249.1689 1.088413166 0.816083156 0.953025802 0.756633324 0.791216381 0.576956184 0.922091744 0.858606757 0.756224608 1 18.31118585 -1.892415659 1.088959503 0.806748039 199.9999998 0.305459038 0.11543577 1429.432703 3.119600182 0.034462308 709397.4998 0.012811039 1.892415659 199.1932517 SLGLS(ph)LSGGDQEDAGR ddPTM_A459_MK2206_30min_R1 2 SLGLSLSGGDQEDAGR 16 0 H0YE82;H7C1L7;H0YEB7;C9JEV6;H7C3G9;Q9UJ70;Q9UJ70-2 H0YE82 NAGK N-acetyl-D-glucosamine kinase 1 SLGLS(0.5)LS(0.5)GGDQEDAGR;SLGLS(0.889)LS(0.111)GGDQEDAGR 292.76 2.12E-151 22634000 4329.2 4261.3 4364 3532.8 4834.4 4249.7 4371.2 3983.3 3765.3 3877.13 TRUE FALSE 3960.978806 3983.888595 4067.783839 3804.896868 4641.835611 4490.314341 4079.605224 3948.474428 4156.716409 4357.458135 0.909011328 0.914268932 0.933522185 0.873191836 1.065262239 1.030489382 0.936235093 0.906141678 0.953931462 1 12.08927109 -6.227035196 24.9530453 0.977452341 0.909841001 0.393709987 0.045048277 795.2987287 576822.9376 0.014867557 0.019192778 5.93E-07 6.227035196 -0.06761134 SLGLSLS(ph)GGDQEDAGR ddPTM_A459_MK2206_30min_R1 1 SLGLSLSGGDQEDAGR 16 0 H0YE82;H7C1L7;H0YEB7;C9JEV6;H7C3G9;Q9UJ70;Q9UJ70-2 H0YE82 NAGK N-acetyl-D-glucosamine kinase 1 SLGLS(0.025)LS(0.975)GGDQEDAGR 213.69 1.88E-08 6065000 1138.2 1266.8 950.92 895.68 857.8 915.9 948.19 933.29 774.49 813.72 TRUE FALSE 1041.390113 1184.33109 886.3741998 964.6654288 823.6320096 967.7574665 884.9379752 925.1303439 855.001007 914.5297769 1.138716463 1.295016433 0.969213056 1.054821235 0.900607099 1.058202249 0.967642604 1.011591276 0.934907784 1 9.836886334 -5.270584766 24.97668983 0.988707864 1.21686645 0.715653879 0.057919295 265.7216625 725705.5624 0.013851127 0.029505808 5.36E-06 5.270584766 0.228158587 SLGLSLS(ph)GGDQEDAGR ddPTM_A459_MK2206_30min_R2 4 SLGLSLSGGDQEDAGR 16 0 H0YE82;H7C1L7;H0YEB7;C9JEV6;H7C3G9;Q9UJ70;Q9UJ70-2 H0YE82 NAGK N-acetyl-D-glucosamine kinase 1 SLGLSLS(1)GGDQEDAGR;SLGLS(0.003)LS(0.997)GGDQEDAGR;SLGLS(0.001)LS(0.999)GGDQEDAGR;SLGLS(0.022)LS(0.977)GGDQEDAGR 188.16 8.98E-07 40599300 100062 120761 108561 138675 123173 125572 119727 100967 105755 111819 TRUE FALSE 107722.8237 114764.1843 112180.3696 127344.8089 118336.6091 130350.7305 104006.7011 114163.7336 114953.3787 108170.3552 0.995862716 1.060957821 1.037071288 1.177261632 1.093983734 1.205050406 0.961508362 1.055406848 1.062706862 1 16.72294565 -7.290140975 24.99990742 1.024522772 1.094538099 0.25078385 0.063409312 1214.582591 1057930.845 0.02750656 0.018547926 5.13E-08 7.290140975 0.070015327 SLGNILQAKPT(ph)SSPAKGPPQK ddPTM_A459_MK2206_30min_R2 1 SLGNILQAKPTSSPAKGPPQK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.431)S(0.431)S(0.138)PAKGPPQK 65.085 0.013389 7188200 21231 62368 28851 39565 32798 24658 37505 25902 24628 37579 TRUE FALSE 22856.46168 59270.89581 29812.87794 36332.41294 31510.18572 25596.37747 32580.54845 29287.48033 26770.09892 36352.80031 0.628740056 1.630435491 0.820098526 0.99943918 0.866788403 0.704110199 0.896232152 0.805645785 0.736397161 1 15.14977888 SLGNILQAKPTS(ph)SPAK ddPTM_A459_MK2206_30min_R2 1 SLGNILQAKPTSSPAK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.108)S(0.446)S(0.446)PAK 59.728 0.041532 244600000 215140 162550 172740 185380 146550 110130 203800 148670 115440 183900 TRUE FALSE 231611.2838 154478.0034 178499.0654 170233.861 140795.7106 114321.0743 177040.8152 168101.6795 125480.7625 177899.3581 1.3019231 0.868344917 1.003371048 0.956911047 0.791434619 0.642616565 0.995173997 0.944925723 0.70534691 1 17.44070178 -2.339770452 1.223257266 0.8644403 200 0.50161507 0.124108273 595.012053 2.542203668 0.037112792 330613.9279 0.004573298 2.339770452 199.1355597 SLGNILQAKPTS(ph)SPAKGPPQK ddPTM_A459_MK2206_30min_R1 3 SLGNILQAKPTSSPAKGPPQK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 S(0.001)LGNILQAKPT(0.164)S(0.417)S(0.417)PAKGPPQK;S(0.003)LGNILQAKPT(0.06)S(0.469)S(0.469)PAKGPPQK;SLGNILQAKPT(0.097)S(0.452)S(0.452)PAKGPPQK 68.303 0.0032024 546769000 17746 21857.9 19421.2 19744.7 15135.2 13311.5 14122.1 18110.1 14785.7 12159.1 TRUE FALSE 16236.60951 20434.94674 18102.94305 21265.44022 14532.33293 14065.18563 13180.04048 17951.76531 16322.72643 13665.4611 1.188149407 1.495371915 1.324722446 1.556145091 1.063435242 1.029250716 0.964478284 1.313659683 1.194451201 1 13.73824652 -6.27743115 24.83139426 1.100160686 1.393804355 0.549785443 0.13154017 588.0242403 913058.7469 0.041442244 0.047146846 5.28E-07 6.27743115 0.293643669 SLGNILQAKPTS(ph)SPAKGPPQK ddPTM_A459_MK2206_30min_R2 1 SLGNILQAKPTSSPAKGPPQK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 S(0.001)LGNILQAKPT(0.134)S(0.432)S(0.432)PAKGPPQK 54.668 0.013467 295440000 309600 403960 408110 335470 406710 268940 456310 330060 303910 345880 TRUE FALSE 333303.214 383899.9338 421716.1837 308061.0279 390740.5218 279174.7002 396395.9489 373199.9753 330343.5425 334593.9639 0.99614234 1.147360608 1.260381923 0.920701092 1.167805053 0.834368609 1.184707411 1.115381673 0.987296778 1 18.35205189 -7.253564283 0.122260057 0.954577454 1.168777746 0.037918094 0.124566249 41.05904952 3.197121791 2.087180029 3.018486502 5.58E-08 7.253564283 0.214200292 SLGNILQAKPTSS(ph)PAK ddPTM_A459_MK2206_30min_R1 2 SLGNILQAKPTSSPAK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPTS(0.087)S(0.913)PAK;SLGNILQAKPTS(0.028)S(0.971)PAK 239.7 9.58E-21 45051000 11609.9 12111 12463 10001.3 8100.2 8107.2 10618.8 8707.2 13111.1 13933.3 TRUE FALSE 10622.41704 11322.5717 11617.04628 10771.60186 7777.551882 8566.222658 9910.439227 8631.073868 14474.04576 15659.4624 0.678338552 0.723049835 0.741854732 0.687865368 0.496667873 0.547031721 0.632872252 0.551173064 0.924300298 1 13.93474706 -8.366645463 4.758680181 0.991822103 0.633959469 0.748349057 0.076832575 0.121915764 4.126803764 0.083430357 0.021871223 4.30E-09 8.366645463 -0.357862634 SLGNILQAKPTSS(ph)PAK ddPTM_A459_MK2206_30min_R2 1 SLGNILQAKPTSSPAK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.001)S(0.072)S(0.928)PAK 256.08 5.47E-30 19347000 130200 123520 107940 108780 110140 63136 142370 109340 66600 119950 TRUE FALSE 140168.2121 117386.1764 111538.6657 99892.32603 105815.3502 65538.68472 123676.648 123631.1134 72392.74761 116036.0413 1.207971338 1.01163548 0.961241563 0.860873267 0.911917961 0.564813173 1.06584684 1.065454423 0.62388157 1 16.82421346 -4.650998664 1.120301317 0.870742251 1.43982249 0.297940544 0.158694792 2.767351865 2.39379082 0.049515774 1.996392024 2.23E-05 4.650998664 0.569080238 SLGNILQAKPTSS(ph)PAKGPPQK ddPTM_A459_MK2206_30min_R2 2 SLGNILQAKPTSSPAKGPPQK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.023)S(0.232)S(0.745)PAKGPPQK;SLGNILQAKPT(0.191)S(0.147)S(0.662)PAKGPPQK 133.15 4.99E-05 105024000 101143.8 153293 152899 145993 180332 110441 166791 129231 124083 149498 TRUE FALSE 108887.4471 145680.6925 157996.5763 134064.9049 173251.2596 114643.9096 144891.1413 146121.9354 134875.515 144619.8925 0.752921643 1.007335091 1.092495463 0.927015659 1.197976686 0.792725729 1.001875598 1.010386143 0.932620767 1 17.14190648 -4.759986526 24.86932344 0.997180285 0.752921324 0.345407126 0.100301728 38.53424583 659366.6999 0.02375754 0.145176479 1.74E-05 4.759986526 -0.244258962 SLGPPGPPFNIT(ph)PR ddPTM_A459_MK2206_30min_R2 1 SLGPPGPPFNITPR 14 0 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1 Q9NZM1-5 MYOF Myoferlin 1 SLGPPGPPFNIT(1)PR 102.63 0.017431 1744600 9475.6 7103.3 8088.8 8132 8898.9 10363 11352 5798 8814.2 8225.1 TRUE FALSE 10201.05922 6750.560451 8358.476555 7467.589587 8549.484473 10757.37123 9861.468764 6555.818508 9580.843184 7956.715661 1.282069092 0.848410417 1.050493308 0.938526637 1.074499182 1.351986383 1.239389364 0.82393525 1.204120342 1 12.95795733 -4.540763536 13.140859 1.064780237 1.408444715 0.147196751 0.160514409 25991.72241 949295.677 0.041305472 104382.8536 2.88E-05 4.540763536 0.343664478 SLGS(ph)PLLHER ddPTM_A459_MK2206_30min_R1 2 SLGSPLLHER 10 0 H7C3L4;E7EQA9;Q92844;E7EV32;E7EMT6;E7ENY2;E7EVA2;E7EW82 H7C3L4 TANK TRAF family member-associated NF-kappa-B activator 1 S(0.389)LGS(0.611)PLLHER;S(0.011)LGS(0.989)PLLHER 108.98 0.010346 9822900 3746.6 3188.6 3805.8 2726 3598.6 3193.7 4250.7 3556.7 3495.6 3364.5 TRUE FALSE 3427.931996 2981.02156 3547.4729 2935.956992 3455.260142 3374.524534 3967.143559 3525.604147 3858.980129 3781.319661 0.906543827 0.788354815 0.938157368 0.776437132 0.913770972 0.8924198 1.049142605 0.932374003 1.020537927 1 11.8846741 -6.996156024 2.308133754 0.994697645 0.857565501 0.558315008 0.056610882 0.218755168 2.340831219 0.022191109 0.01757445 1.01E-07 6.996156024 -0.137132144 SLGS(ph)PLLHER ddPTM_A459_MK2206_30min_R2 3 SLGSPLLHER 10 0 H7C3L4;E7EQA9;Q92844;E7EV32;E7EMT6;E7ENY2;E7EVA2;E7EW82 H7C3L4 TANK TRAF family member-associated NF-kappa-B activator 1 S(0.014)LGS(0.986)PLLHER;S(0.007)LGS(0.993)PLLHER;S(0.223)LGS(0.777)PLLHER 82.705 0.027757 18804600 181486 145335 154374 138412 123696 113673 157644 124546 93213 169891 TRUE FALSE 195380.7077 138117.8752 159520.7521 127103.2968 118839.0735 117998.9057 136945.1534 140824.5898 101320.4982 164347.4706 1.188826983 0.840401588 0.970631015 0.773381521 0.723096456 0.717984312 0.833265964 0.856871051 0.61650172 1 17.32638973 -1.522887684 0.871021178 0.785914533 159.0430702 0.515169177 0.109244574 581.4270228 1.467311589 0.035495483 182590.382 0.029999383 1.522887684 158.2571556 SLGS(ph)VQAPSYGAR ddPTM_A459_MK2206_30min_R1 3 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.455)LGS(0.514)VQAPS(0.031)YGAR;S(0.008)LGS(0.577)VQAPS(0.414)Y(0.001)GAR;S(0.172)LGS(0.81)VQAPS(0.018)YGAR 193.98 0.0001908 1058194000 4206.88 3516.51 4010.2 3506.23 3410.36 3501.73 5143 4005.44 3958.97 4087.24 TRUE FALSE 3849.062765 3287.58456 3737.998797 3776.280442 3274.51814 3699.994926 4799.919854 3970.42086 4370.519099 4593.598148 0.837918912 0.715688324 0.813740923 0.822074618 0.712843839 0.805467698 1.044915053 0.864337875 0.951436969 1 12.16540894 -7.130498236 6.41031708 0.953122697 0.779087495 0.699401808 0.057917952 0.138253848 6.610691352 0.021423503 0.016568469 7.40E-08 7.130498236 -0.174035202 SLGS(ph)VQAPSYGAR ddPTM_A459_MK2206_30min_R2 3 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.319)LGS(0.679)VQAPS(0.002)YGAR;S(0.018)LGS(0.969)VQAPS(0.012)YGAR;S(0.039)LGS(0.956)VQAPS(0.005)YGAR 150.12 0.00050097 178341000 56411 80229 72051.2 77746 63451 65241 61554 44182.2 59144 54871 TRUE FALSE 60729.86953 76244.94452 74453.35105 71393.9031 60959.59492 67723.79197 53471.88586 49956.96524 64288.23821 53080.56376 1.14410747 1.436400428 1.402648084 1.345010264 1.148435333 1.275867986 1.007372229 0.941153629 1.211144601 1 15.69589607 -6.856270993 1.270997753 1.036632169 1.339191146 0.539037916 0.112174965 0.330284708 1.113711959 0.057353127 0.047393966 1.39E-07 6.856270993 0.302558977 SLGSASPGPGQPPLS(ph)SPTR ddPTM_A459_MK2206_30min_R2 2 SLGSASPGPGQPPLSSPTR 19 0 Q9C0B5-2;Q9C0B5 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5 1 SLGSASPGPGQPPLS(0.476)S(0.476)PT(0.048)R;SLGSASPGPGQPPLS(0.496)S(0.496)PT(0.009)R 195.55 3.40E-15 33196100 95580 53926 73397 73124 58822 89954 125522 62448 118667 97949 TRUE FALSE 102897.6783 51248.11326 75844.01935 67149.53529 56512.35272 93377.2625 109040.8106 70610.16802 128988.4412 94752.93215 1.085957721 0.540860447 0.800439814 0.708680288 0.596417983 0.985481508 1.150790885 0.745202986 1.361313452 1 16.53188297 -6.892543576 6.274563677 1.046232092 0.737040524 0.37291327 0.197043745 0.22605639 11.76279917 0.065747637 0.057969512 1.28E-07 6.892543576 -0.309191568 SLGSASPGPGQPPLSS(ph)PTR ddPTM_A459_MK2206_30min_R1 3 SLGSASPGPGQPPLSSPTR 19 0 Q9C0B5-2;Q9C0B5 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5 1 SLGSASPGPGQPPLS(0.229)S(0.758)PT(0.013)R;SLGSASPGPGQPPLS(0.207)S(0.793)PTR;SLGSASPGPGQPPLS(0.03)S(0.967)PT(0.003)R 276.05 1.10E-59 36202800 6151.1 6103 4410.7 4148.07 6168.9 6728.3 7912.7 7600.9 9519.1 7243.2 TRUE FALSE 5627.916644 5705.693591 4111.313973 4467.55507 5923.17965 7109.250532 7384.858221 7534.446133 10508.64451 8140.542299 0.691344193 0.700898464 0.50504178 0.548803127 0.727614873 0.87331412 0.907170303 0.925545972 1.290902267 1 12.99090919 -7.184414882 0.993257067 1.100848011 0.609967911 0.77417077 0.104942118 0.26226629 0.512141036 0.076712781 0.046718767 6.54E-08 7.184414882 -0.490880101 SLGSASPGPGQPPLSS(ph)PTR ddPTM_A459_MK2206_30min_R2 2 SLGSASPGPGQPPLSSPTR 19 0 Q9C0B5-2;Q9C0B5 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5 1 SLGSASPGPGQPPLS(0.184)S(0.631)PT(0.184)R;SLGSASPGPGQPPLS(0.219)S(0.78)PTR 168.62 4.96E-09 36486700 108693 58984 75059 80524 66839 92643 119300 63690 123153 78472 TRUE FALSE 117014.6197 56054.94033 77561.4296 73944.93162 64214.56502 96168.59428 103635.7667 72014.50168 133864.6253 75911.46507 1.541461748 0.738425221 1.02173538 0.974094382 0.84591392 1.266852039 1.365218898 0.948664363 1.763430929 1 16.21203017 -6.788568705 23.09175295 1.271649329 1.005508261 0.153530982 0.285313878 163.9287865 139529.4958 0.094702909 0.083553252 1.63E-07 6.788568705 -0.266141068 SLGSVQAPS(ph)YGAR ddPTM_A459_MK2206_30min_R1 1 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.001)LGS(0.01)VQAPS(0.989)YGAR 111.66 0.0051753 56296000 1945 1565.5 2156.8 1928 1361.6 1396.8 2725 1707.2 1859.6 2330.1 TRUE FALSE 1779.567536 1463.585665 2010.402425 2076.494894 1307.364589 1475.885609 2543.220222 1692.27413 2052.912075 2618.770379 0.679543174 0.558882778 0.767689463 0.79292744 0.499228416 0.563579618 0.971150522 0.646209436 0.783922138 1 11.35467385 -9.261424224 0.394073613 1.043365602 0.649200619 0.378903868 0.126833291 3.692406062 0.928382398 0.412905518 0.097687172 5.48E-10 9.261424224 -0.394164983 SLGSVQAPS(ph)YGARPVSSAASVYAGAGGSGSR ddPTM_A459_MK2206_30min_R2 1 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR 31 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.003)LGS(0.043)VQAPS(0.596)Y(0.163)GARPVS(0.051)S(0.02)AAS(0.085)VY(0.029)AGAGGS(0.004)GS(0.006)R 63.893 0.00026245 101210000 21413 72430 46340 52026 62121 62920 53363 43949 54224 58976 TRUE FALSE 23052.39574 68833.23152 47884.95247 47775.30938 59681.81741 65314.46469 46356.374 49693.2852 58940.30551 57051.61795 0.404062086 1.206507966 0.83932681 0.837404987 1.046102101 1.144831068 0.812533906 0.871023241 1.03310489 1 15.79998018 -4.745542301 24.93187637 0.966366454 0.404060463 0.637930289 0.129222911 591.4165801 927484.6163 0.03234625 0.81444886 1.80E-05 4.745542301 -0.562305992 SLGSVQAPSYGAR ddPTM_A459_MK2206_30min_R2 1 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 142.76 0.010502 33523000 32387 37699 42149 41395 34622 45748 38675 33702 35049 33107 FALSE TRUE 34866.57362 35826.92248 43554.22662 38012.89608 33262.56632 47488.9722 33596.92604 38106.96712 38097.49867 32026.7213 1.088671341 1.118657203 1.359933982 1.186911883 1.038587934 1.482792189 1.049027958 1.18984915 1.189553508 1 14.96698849 -9.814258365 0.752876021 0.989977755 1.195677173 0.156923644 0.131474186 19.44290409 9.175292574 0.717724279 0.044603684 1.53E-10 9.814258365 0.205699418 SLGSVQAPSYGARPVS(ph)SAASVYAGAGGSGSR ddPTM_A459_MK2206_30min_R1 2 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR 31 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 SLGSVQAPS(0.001)Y(0.001)GARPVS(0.68)S(0.23)AAS(0.075)VY(0.012)AGAGGSGSR;SLGSVQAPS(0.001)Y(0.001)GARPVS(0.639)S(0.233)AAS(0.086)VY(0.04)AGAGGSGSR 118.41 3.38E-16 300650000 2230.1 2323.9 1806.27 1847.37 2668.2 2133.81 2213.31 2206.3 1339.01 1070.47 TRUE FALSE 2040.418284 2172.613688 1683.665425 1989.654757 2561.919944 2254.624478 2065.664128 2187.010552 1478.204881 1203.087905 1.695984371 1.805864458 1.399453371 1.653790009 2.129453661 1.874031372 1.716968577 1.817831051 1.228675706 1 10.23252634 -8.392557705 3.379069868 1.008024149 1.762832754 0.692187216 0.175337291 0.139357282 2.815635273 0.181723916 0.048536431 4.05E-09 8.392557705 0.754808605 SLGSVQAPSYGARPVS(ph)SAASVYAGAGGSGSR ddPTM_A459_MK2206_30min_R2 1 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR 31 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 SLGS(0.002)VQAPS(0.009)Y(0.008)GARPVS(0.293)S(0.293)AAS(0.293)VY(0.096)AGAGGS(0.004)GS(0.004)R 49.588 0.0094688 12314000 1130.7 15222 13124 11428 17061 19515 9787.8 4721.6 25568 6780.1 TRUE FALSE 1217.267261 14466.09761 13561.54761 10494.29584 16391.09942 20257.657 8502.650103 5338.729332 27791.85842 6558.865892 0.185591119 2.205579113 2.06766655 1.600016835 2.499075249 3.088591432 1.296359804 0.813971412 4.237296338 1 12.67923066 -4.759268845 24.93501617 2.087229824 0.185588604 0.256178381 0.973428221 77.90490294 894747.9437 0.232085885 1.492876356 1.74E-05 4.759268845 -1.901641219 SLGSVQAPSYGARPVSSAAS(ph)VYAGAGGSGSR ddPTM_A459_MK2206_30min_R1 2 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR 31 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 SLGSVQAPSYGARPVS(0.005)S(0.01)AAS(0.972)VY(0.012)AGAGGS(0.001)GSR;SLGSVQAPS(0.006)Y(0.005)GARPVS(0.06)S(0.06)AAS(0.841)VY(0.028)AGAGGSGSR 125.32 2.68E-18 158932000 2293.3 1638.94 2470 5419.6 4040.8 1473.12 2376.4 4619.9 1143.16 178.706 TRUE FALSE 2098.242792 1532.244708 2302.343282 5837.018531 3879.846379 1556.526781 2217.874692 4579.508701 1261.995573 200.8454484 10.44705174 7.62897402 11.46325844 29.06223953 19.31757184 7.749873315 11.04269332 22.80115749 6.283416341 1 7.649941957 -8.497451531 8.211492983 1.001094594 14.81902118 0.334829402 6.581370855 0.262769002 74.91331878 6.79973846 1.757397498 3.18E-09 8.497451531 13.81792659 SLGSVQAPSYGARPVSSAAS(ph)VYAGAGGSGSR ddPTM_A459_MK2206_30min_R2 2 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR 31 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 SLGSVQAPS(0.021)Y(0.019)GARPVS(0.095)S(0.095)AAS(0.54)VY(0.184)AGAGGS(0.023)GS(0.023)R;SLGSVQAPS(0.015)Y(0.013)GARPVS(0.256)S(0.092)AAS(0.479)VY(0.144)AGAGGSGSR 73.603 3.11E-05 89467000 24666.9 64151 46896.5 52891.3 59924 60476 54141.6 51860.5 63694 42969.9 TRUE FALSE 26555.41683 60965.35462 48460.0059 48569.9116 57571.08267 62777.45656 47032.74288 58638.84541 69233.98899 41567.79568 0.638845924 1.466648727 1.165806488 1.168450499 1.384992438 1.510242618 1.1314707 1.410679697 1.665567968 1 15.34317862 -4.754326395 24.99629282 1.327600629 0.638844726 0.52905863 0.193495662 195.593823 687292.2529 0.047048087 0.463631494 1.76E-05 4.754326395 -0.688755903 SLGTADVHFER ddPTM_A459_MK2206_30min_R1 2 SLGTADVHFER 11 0 E9PB61;Q86V81 E9PB61 ALYREF THO complex subunit 4 0 ; 145.09 0.0009948 28294000 18500.2 17675 18183.4 15562.7 21225 21122.1 19383 16261.3 14572.2 12525.8 FALSE TRUE 16926.66084 16524.35429 16949.16147 16761.34185 20379.56331 22318.01505 18089.99544 16119.12917 16087.03234 14077.59067 1.202383365 1.173805566 1.203981695 1.19063995 1.447659886 1.585357578 1.285020701 1.145020448 1.142740453 1 13.78111282 -7.876958224 3.020597572 1.086241176 1.303020159 0.357637593 0.126718675 0.352079853 6.277338459 0.096041935 0.0400227 1.33E-08 7.876958224 0.216778982 SLGTADVHFER ddPTM_A459_MK2206_30min_R2 3 SLGTADVHFER 11 0 E9PB61;Q86V81 E9PB61 ALYREF THO complex subunit 4 0 ;; 127.17 0.0042402 11739000 73802 90846 77236 105860 91789 105070 108232 87444 79974 79425 FALSE TRUE 79452.33786 86334.71974 79811.00969 97210.89937 88184.90266 109068.5125 94021.00839 98873.23104 86929.99396 76833.36875 1.03408635 1.123661778 1.038754528 1.265217196 1.147742239 1.419546146 1.223700196 1.286852739 1.131409378 1 16.22944539 -5.760683158 24.99954866 1.229218549 1.071316954 0.266529642 0.107147211 23.49059706 776504.5949 0.028220903 0.045402427 1.74E-06 5.760683158 -0.157901595 SLGVLPFTLNSGS(ph)PEK ddPTM_A459_MK2206_30min_R1 2 SLGVLPFTLNSGSPEK 16 0 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 1 SLGVLPFTLNS(0.067)GS(0.933)PEK;SLGVLPFTLNS(0.083)GS(0.917)PEK 210.43 4.61E-08 69998000 20549 21204 22065 18016.5 15043.1 12824.5 16053.3 15460.9 20338 20197 TRUE FALSE 18801.19964 19823.61575 20567.28928 19404.13395 14443.90147 13550.61211 14982.41365 15325.72698 22452.20788 22699.15684 0.828277446 0.873319476 0.906081641 0.854839415 0.636318854 0.596965438 0.660042739 0.675167236 0.989120787 1 14.47035109 -6.124290731 7.448490337 0.730492493 0.871282489 0.110396015 0.133169349 0.446758692 25.16553485 0.039364619 0.051005972 7.51E-07 6.124290731 0.140789996 SLGVLPFTLNSGS(ph)PEK ddPTM_A459_MK2206_30min_R2 2 SLGVLPFTLNSGSPEK 16 0 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 1 SLGVLPFTLNS(0.001)GS(0.999)PEK;SLGVLPFT(0.014)LNS(0.027)GS(0.96)PEK 231.38 2.33E-15 73765000 309780 265780 269870 236820 284370 197392 356400 224220 194344 291340 TRUE FALSE 333496.995 252581.7517 278867.3311 217471.0485 273204.205 204903.8909 309604.2519 253526.3239 211247.6898 281833.5997 1.183311697 0.896208798 0.989475107 0.771629248 0.969381242 0.727038547 1.098535633 0.899560323 0.74954757 1 18.10448409 -3.894727066 1.603454232 0.894249565 4.143559037 0.345425901 0.115398366 17.93686021 4.80777719 0.030298048 176.2975655 0.00012743 3.894727066 3.249309471 SLGYAYVNFQQPADAER ddPTM_A459_MK2206_30min_R1 1 SLGYAYVNFQQPADAER 17 0 P11940;E7ERJ7;P11940-2;A0A087WTT1;E7EQV3;H0YBN4;E5RH24;E5RJB9;E5RHG7;E5RGH3;B1ANR1;B1ANR0;Q13310-2;Q13310;Q13310-3 P11940;B1ANR0 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 4 0 155.43 0.0030927 0 581.15 780.77 635.49 560.37 699.74 594.02 662.65 667.19 541.65 545.19 FALSE TRUE 531.7201408 729.9417311 592.3547094 603.5297945 671.8678741 627.6528991 618.4458276 661.3568282 597.9564558 612.7322532 0.867785461 1.191289878 0.966743151 0.984981273 1.096511356 1.024351005 1.009324749 1.07935697 0.975885393 1 9.259112984 -4.704106054 24.5919235 1.03583123 0.86777961 0.37430143 0.065432876 29284.64602 12559163.48 0.015338366 40.50386742 1.98E-05 4.704106054 -0.16805162 SLGYHGSSYSPEGVEPVS(ph)PVSSPSLTHDK ddPTM_A459_MK2206_30min_R1 1 SLGYHGSSYSPEGVEPVSPVSSPSLTHDK 29 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SLGYHGSSYSPEGVEPVS(0.99)PVS(0.009)SPSLTHDK 131.26 6.64E-14 5611800 896.84 482.76 242.6 410.34 1773.5 1536.5 1119 599.15 373.93 162.74 TRUE FALSE 820.5590485 451.3322363 226.1329879 441.9444579 1702.85774 1623.495302 1044.353552 593.9116947 412.8013616 182.9014598 4.486344993 2.467625117 1.236365134 2.416298144 9.310246847 8.876338678 5.709924638 3.247167602 2.256960453 1 7.51492278 -3.312833594 20.54114075 4.313493916 8.525115616 0 2.838801103 0 0 0.718586724 0 0.000486594 3.312833594 4.2116217 SLHLS(ph)PQEQSASYQDR ddPTM_A459_MK2206_30min_R1 1 SLHLSPQEQSASYQDR 16 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 SLHLS(1)PQEQSASYQDR 167.18 1.52E-05 7600700 3577.6 1636.1 2292.1 1355.7 4075.1 3615.8 4032.5 2795.1 1933.8 2238.6 TRUE FALSE 3273.306333 1529.589593 2136.518638 1460.116249 3912.780138 3820.523471 3763.499283 2770.662735 2134.82543 2515.934669 1.301029941 0.607960776 0.8491948 0.580347442 1.55519942 1.518530477 1.495865266 1.101245899 0.848521807 1 11.29687874 -6.259011609 24.99484553 1.283686511 0.819482464 0.337785131 0.284906936 242.7982129 2499699.926 0.088781704 0.109182572 5.51E-07 6.259011609 -0.464204047 SLHLS(ph)PQEQSASYQDR ddPTM_A459_MK2206_30min_R2 4 SLHLSPQEQSASYQDR 16 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 S(0.196)LHLS(0.804)PQEQSASYQDR;S(0.13)LHLS(0.87)PQEQSASYQDR;S(0.005)LHLS(0.995)PQEQSASYQDR;SLHLS(0.999)PQEQS(0.001)ASYQDR 121.51 0.0010048 63164900 88020 144404 109279 176211 158656 178202 174062 122902 126608 119320 TRUE FALSE 94758.87888 137233.1073 112922.3073 161813.9976 152426.3683 184983.602 151207.4503 138965.7134 137620.135 115426.5982 0.820944915 1.188921007 0.97830404 1.401877905 1.320548042 1.602608107 1.309987929 1.203931465 1.192274027 1 16.81661618 -5.755434512 24.9923297 1.313781588 1.015343019 0.381961491 0.169063248 148.6166409 618536.0185 0.046208389 0.077456164 1.76E-06 5.755434512 -0.298438569 SLHPWYGITPTS(ph)SPK ddPTM_A459_MK2206_30min_R1 2 SLHPWYGITPTSSPK 15 0 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 SLHPWYGITPT(0.003)S(0.498)S(0.498)PK;SLHPWYGITPT(0.014)S(0.493)S(0.493)PK 141.6 0.00025455 36234000 12574.3 7739.6 10535.4 7637.5 12756.7 12806.6 13621.7 11905.3 8827.2 8040.3 TRUE FALSE 11504.78975 7235.750633 9820.286401 8225.741573 12248.57363 13531.69862 12713.02125 11801.21322 9744.819028 9036.393065 1.273161722 0.800734384 1.086748477 0.910290369 1.35547154 1.497466802 1.406868997 1.305965016 1.078396984 1 13.14153131 -6.267144723 24.85304269 1.30714045 1.007163406 0.317184357 0.180070056 445.7454158 1941708.546 0.054357616 0.063345731 5.41E-07 6.267144723 -0.299977045 SLHPWYGITPTS(ph)SPK ddPTM_A459_MK2206_30min_R2 2 SLHPWYGITPTSSPK 15 0 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 SLHPWYGITPT(0.02)S(0.49)S(0.49)PK;SLHPWYGITPT(0.135)S(0.433)S(0.433)PK 145.04 0.00024519 22298000 88889 141363 110055 152920 150857 144289 200487 124238 144112 127949 TRUE FALSE 95694.41018 134343.119 113724.1788 140425.9468 144933.5962 149780.019 174162.8161 140476.3332 156646.6013 123774.0346 0.773138005 1.085390158 0.918804813 1.134534778 1.170953154 1.210108562 1.407103005 1.134941861 1.265585321 1 16.91734917 -5.638614209 0.962126837 1.225236442 0.859074578 0.507243885 0.119576602 0.589782951 0.954144646 0.045050776 0.170519947 2.30E-06 5.638614209 -0.366161864 SLIEEGGDWDRR ddPTM_A459_MK2206_30min_R1 4 SLIEEGGDWDRR 12 1 Q15008-4;C9J0E9;Q15008;Q15008-3;Q15008-2;H7C531 Q15008-4 PSMD6 26S proteasome non-ATPase regulatory subunit 6 0 ;;; 257.8 7.43E-25 50236500 10667.3 11007.3 11953 9907.8 11002.1 11170.6 11729.2 10537.3 9522.4 8067.6 FALSE TRUE 9759.990119 10290.72277 11141.66366 10670.90047 10563.86306 11803.06972 10946.76647 10445.1735 10512.28756 9067.075195 1.076420997 1.134955049 1.228804595 1.176884524 1.165079459 1.301750505 1.207309549 1.151989288 1.15939124 1 13.14642153 -8.958710168 1.434050333 1.00016023 1.185484393 0.477176725 0.056312312 1.784242153 4.860425138 0.05734503 0.016730277 1.10E-09 8.958710168 0.185324163 SLIEEGGDWDRR ddPTM_A459_MK2206_30min_R2 4 SLIEEGGDWDRR 12 1 Q15008-4;C9J0E9;Q15008;Q15008-3;Q15008-2;H7C531 Q15008-4 PSMD6 26S proteasome non-ATPase regulatory subunit 6 0 ;;; 189.17 0.00017322 44853800 84010 97857 80527 100798 93263 106221 105608 86445 87542 95628 FALSE TRUE 90441.87019 92997.56368 83211.72999 92562.48096 89601.02601 110263.3146 91741.54274 97743.65831 95156.24492 92507.66619 0.977668921 1.00529575 0.899511721 1.000592543 0.968579467 1.191937048 0.991718271 1.056600629 1.028630911 1 16.49728531 SLIGS(ph)PGR ddPTM_A459_MK2206_30min_R1 3 SLIGSPGR 8 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SLIGS(1)PGR;SLIGS(1)PGR;SLIGS(1)PGR 101.46 0.017015 189237000 22933.7 20673.6 20533.3 17402.1 23167.3 19797.7 21534.6 19408.7 18047.8 16295.8 TRUE FALSE 20983.06839 19327.74488 19139.55681 18742.41276 22244.49738 20918.62867 20098.06613 19239.01178 19923.93339 18314.64673 1.145698778 1.055316281 1.045041004 1.023356499 1.214574199 1.142180298 1.097376675 1.050471356 1.087868835 1 14.16071025 -11.21656439 4.62451551 0.996377511 1.094528473 0.213552332 0.05508686 0.002275492 0.000150722 0.058991026 0.013799416 6.07E-12 11.21656439 0.098150963 SLIGS(ph)PGR ddPTM_A459_MK2206_30min_R2 4 SLIGSPGR 8 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SLIGS(1)PGR;SLIGS(1)PGR;SLIGS(1)PGR;SLIGS(1)PGR 109.83 0.012283 351450000 845708 916931 880075 1039987 1006089 1024473 986520 847154 910973 915881 TRUE FALSE 910456.0547 871397.5399 909416.2612 955016.7353 966584.8907 1063460.038 856988.739 957879.9365 990207.7849 885995.878 1.027607551 0.983523244 1.026433964 1.077902007 1.090958677 1.200299081 0.967260413 1.081133626 1.11762121 1 19.75694046 -5.679973271 3.509021104 1.081426177 1.005367093 0.193291632 0.060171019 0.354969091 8.576125519 0.01689826 0.030614692 2.09E-06 5.679973271 -0.076059084 SLIPDIKPLAGQEAVVDLHADDSRIS(ph)EDETER ddPTM_A459_MK2206_30min_R2 3 SLIPDIKPLAGQEAVVDLHADDSRISEDETER 32 2 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q9UKV3-3;Q9UKV3-2 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SLIPDIKPLAGQEAVVDLHADDS(0.175)RIS(0.651)EDET(0.174)ER;SLIPDIKPLAGQEAVVDLHADDS(0.372)RIS(0.388)EDET(0.239)ER;SLIPDIKPLAGQEAVVDLHADDS(0.093)RIS(0.871)EDET(0.036)ER 57.339 0.00058901 47694000 115101 111956 114573 111433 111768 101636 125331 84939 85550 118032 TRUE FALSE 123913.2211 106396.4278 118392.8066 102328.5674 107379.4267 105503.8292 108874.8892 96040.81894 92990.98436 114180.6255 1.08523859 0.931825582 1.036890507 0.896199044 0.940434739 0.924008156 0.953532078 0.841130608 0.814419994 1 16.80095835 -1.522878745 0.399148273 0.89398856 3.623039702 0.390766214 0.061457266 74.05883829 0.983695611 0.043840897 158.8274481 0.03 1.522878745 2.729051142 SLIPDIKPLAGQEAVVDLHADDSRISEDET(ph)ER ddPTM_A459_MK2206_30min_R1 1 SLIPDIKPLAGQEAVVDLHADDSRISEDETER 32 2 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q9UKV3-3;Q9UKV3-2 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SLIPDIKPLAGQEAVVDLHADDS(0.066)RIS(0.155)EDET(0.779)ER 62.696 0.00030734 48811000 3427.3 3909.5 3484.6 2872.1 3400.4 3412.1 4373.8 2998 3757.1 4104.6 TRUE FALSE 3135.790138 3654.990839 3248.075061 3093.30964 3264.954868 3605.290153 4082.031782 2971.788802 4147.66399 4613.108836 0.679756374 0.792305356 0.704096776 0.670547726 0.707755872 0.781531562 0.884876539 0.644205222 0.899103866 1 12.17152361 -9.15273705 0.395662455 1.034240741 0.709728104 0.575091121 0.072896455 2.129711294 0.583623977 0.199162659 0.054379123 7.03E-10 9.15273705 -0.324512637 SLIPPIPVS(ph)PPILAPR ddPTM_A459_MK2206_30min_R2 1 SLIPPIPVSPPILAPR 16 0 F8W689;P48382-2;P48382 F8W689 RFX5 DNA-binding protein RFX5 1 S(0.002)LIPPIPVS(0.998)PPILAPR 128.45 0.00095284 2374700 10571 14649 11365 11169 9697.4 12305 12028 8400.1 9800.2 12107 TRUE FALSE 11380.32389 13921.55196 11743.90343 10256.45697 9316.63135 12773.2754 10448.70915 9498.021912 10652.60368 11711.94958 0.971684843 1.188662218 1.002728311 0.875725847 0.795480828 1.090619056 0.892140892 0.810968477 0.909549995 1 13.51569363 -5.553319722 5.005274196 0.905821683 1.084603617 0.345322666 0.094376042 0.181688155 11.57182021 0.025598473 0.047189468 2.80E-06 5.553319722 0.178781934 SLKESEQES(ph)EEEILAQK ddPTM_A459_MK2206_30min_R2 2 SLKESEQESEEEILAQK 17 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 SLKESEQES(1)EEEILAQK;SLKES(0.002)EQES(0.998)EEEILAQK 72.09 0.01551 13203200 54500 74277 70343 71347 75697 47616 83513 53749 57323 70044 TRUE FALSE 58672.5619 70588.51219 72688.20051 65517.72187 72724.75543 49428.06025 72547.64278 60774.17885 62308.85092 67758.47002 0.865907419 1.041766619 1.072754454 0.966930361 1.073293943 0.729474267 1.070680061 0.896923718 0.919572873 1 16.04811368 SLKPGEELS(ph)PTDENGK ddPTM_A459_MK2206_30min_R2 1 SLKPGEELSPTDENGK 16 1 P42330-2 P42330-2 AKR1C3 Aldo-keto reductase family 1 member C3 1 SLKPGEELS(0.894)PT(0.106)DENGK 100.01 0.0034343 22716000 74702 36392 48655 34290 27305 23733 51113 37451 23019 54863 TRUE FALSE 80421.24256 34584.8262 50277.13342 31488.39731 26232.8685 24636.17595 44401.8017 42345.97429 25021.15101 53072.8248 1.515299833 0.651648491 0.947323486 0.593305471 0.494280615 0.464195679 0.836620283 0.797884312 0.471449392 1 15.69568572 -4.760064692 24.99158512 0.684491612 1.515300845 0.637163186 0.185504264 22.08201844 401300.1696 0.046182983 0.280533766 1.74E-05 4.760064692 0.830809233 SLKPGEELSPT(ph)DENGK ddPTM_A459_MK2206_30min_R1 1 SLKPGEELSPTDENGK 16 1 P42330-2 P42330-2 AKR1C3 Aldo-keto reductase family 1 member C3 1 SLKPGEELS(0.352)PT(0.648)DENGK 108.96 0.032898 0 475.06 496.05 706.45 440.16 502.61 460.25 372.59 383.17 654.42 879.19 TRUE FALSE 434.6536524 463.7570548 658.4981423 474.0611995 482.5899794 486.3089573 347.7352009 379.8199851 722.4493009 988.1106947 0.439883562 0.469337147 0.66642143 0.479765275 0.488396677 0.492160403 0.351919277 0.384390117 0.731142072 1 9.948528861 -8.523710095 3.729150198 0.998840679 0.476830186 0.817906921 0.079401941 0.083717834 3.262047025 0.0833569 0.021924855 2.99E-09 8.523710095 -0.522010494 down SLKPGEELSPT(ph)DENGK ddPTM_A459_MK2206_30min_R2 1 SLKPGEELSPTDENGK 16 1 P42330-2 P42330-2 AKR1C3 Aldo-keto reductase family 1 member C3 1 SLKPGEELS(0.245)PT(0.755)DENGK 131.98 0.00091055 22283000 81610 39151 56452 30645 30262 20234 54006 39299 23693 61386 TRUE FALSE 87858.12435 37206.81827 58334.0815 28141.20547 29073.76183 21004.01905 46914.94733 44435.51423 25753.77431 59382.97985 1.479516935 0.626556942 0.982336718 0.473893455 0.489597556 0.353704363 0.790040302 0.74828704 0.433689491 1 15.85776187 -2.698843929 1.299592463 0.619907031 199.9999923 0.550432823 0.218829833 253.1378153 2.409915933 0.062104684 148472.393 0.002000581 2.698843929 199.3800852 SLKQPLEQNQT(ph)ISPLSTYEESK ddPTM_A459_MK2206_30min_R2 1 SLKQPLEQNQTISPLSTYEESK 22 1 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 SLKQPLEQNQT(0.531)IS(0.468)PLST(0.001)YEESK 107.92 7.87E-05 10691000 28437 52562 41194 51449 48227 34850 43602 30818 31228 38519 TRUE FALSE 30614.15858 49951.84751 42567.3874 47245.45212 46333.36566 36176.24117 37877.00502 34846.01841 33944.15499 37262.12818 0.821589106 1.340552726 1.14237671 1.267921464 1.243443891 0.970858159 1.016501388 0.935159104 0.910955886 1 15.18542245 -6.773798251 24.43400188 0.96575517 1.177694579 0.353257126 0.132196112 180.0863458 356035.5528 0.044747472 0.039758554 1.68E-07 6.773798251 0.21193941 SLLFGAMSEMIS(ph)PSEK ddPTM_A459_MK2206_30min_R1 1 SLLFGAMSEMISPSEK 16 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SLLFGAMS(0.411)EMIS(0.584)PS(0.005)EK 195.5 1.26E-06 23928000 3893.2 4344.1 4109.1 3468.4 3644.4 3504.1 3737.4 3489.1 3528.3 3365.1 TRUE FALSE 3562.062896 4061.2983 3830.185741 3735.536769 3499.235831 3702.499114 3488.084865 3458.595167 3895.079411 3781.993993 0.941847846 1.073851071 1.012742418 0.987716209 0.925235692 0.978980697 0.922287257 0.914489862 1.029901004 1 11.88493136 -5.977768969 3.995131698 0.956233043 1.015096645 0.172972118 0.045371365 0.296672702 10.68813301 0.01284935 0.018886488 1.05E-06 5.977768969 0.058863602 SLLGDSAPTLHLNKGT(ph)PS(ph)QSPVVGR ddPTM_A459_MK2206_30min_R1 1 SLLGDSAPTLHLNKGTPSQSPVVGR 25 1 P52594-2;P52594-3;P52594;P52594-4;C9J2I0;B8ZZY2 P52594-2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 2 SLLGDSAPT(0.001)LHLNKGT(0.959)PS(0.606)QS(0.435)PVVGR 79.143 0.0003285 30910000 4234.7 3271.8 3789.1 3697.6 4783.9 4129.9 4239 4383.1 2865.2 1999.2 TRUE FALSE 3874.516528 3058.805225 3531.906449 3982.389793 4593.347133 4363.731369 3956.224044 4344.779019 3163.047793 2246.875989 1.72440159 1.361359167 1.571918729 1.772411923 2.044326058 1.942132717 1.760766533 1.933697738 1.407753614 1 11.13370479 -8.536041568 4.159181743 1.00086312 1.757707654 0.630479389 0.18484681 0.131797017 7.432558056 0.202875537 0.053085223 2.91E-09 8.536041568 0.756844534 SLLGDSAPTLHLNKGT(ph)PS(ph)QSPVVGR ddPTM_A459_MK2206_30min_R2 1 SLLGDSAPTLHLNKGTPSQSPVVGR 25 1 P52594-2;P52594-3;P52594;P52594-4;C9J2I0;B8ZZY2 P52594-2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 2 SLLGDS(0.002)APT(0.005)LHLNKGT(0.953)PS(0.586)QS(0.455)PVVGR 60.735 0.021965 17581000 17888 37174 29539 34403 35916 36185 31661 24240 35501 26500 TRUE FALSE 19257.51903 35327.99322 30523.81552 31592.16485 34505.75738 37562.04553 27503.87267 27408.25123 38588.81281 25635.30717 0.751210778 1.37809908 1.190694354 1.232369273 1.346024729 1.465246556 1.07289031 1.069160242 1.505299412 1 14.64584456 -4.752755279 24.97957004 1.254866794 0.751209814 0.456443506 0.163601918 299.0376716 860108.4016 0.039602933 0.457261247 1.77E-05 4.752755279 -0.503656979 SLLGDSAPTLHLNKGT(ph)PSQS(ph)PVVGR ddPTM_A459_MK2206_30min_R1 1 SLLGDSAPTLHLNKGTPSQSPVVGR 25 1 P52594-2;P52594-3;P52594;P52594-4;C9J2I0;B8ZZY2 P52594-2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 2 SLLGDS(0.001)APT(0.033)LHLNKGT(0.947)PS(0.214)QS(0.805)PVVGR 56.009 0.018078 30544000 4906.1 4137.8 4772.5 4167.5 5682.2 4686.8 4610.5 5111.3 2783 2266.4 TRUE FALSE 4488.810432 3868.428468 4448.555997 4488.481572 5455.865942 4952.162566 4302.941957 5066.612443 3072.302809 2547.178742 1.762267546 1.518711036 1.746464009 1.762138439 2.141925045 1.944175524 1.689297216 1.98910754 1.206159096 1 11.31468449 -10.20522783 9.542525896 1 1.766839857 0.455668536 0.24575224 0 0 0.236798903 0.05743217 6.23E-11 10.20522783 0.766839857 SLLGDSAPTLHLNKGT(ph)PSQS(ph)PVVGR ddPTM_A459_MK2206_30min_R2 1 SLLGDSAPTLHLNKGTPSQSPVVGR 25 1 P52594-2;P52594-3;P52594;P52594-4;C9J2I0;B8ZZY2 P52594-2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 2 SLLGDS(0.002)APT(0.067)LHLNKGT(0.914)PS(0.382)QS(0.634)PVVGR 64.213 0.0036586 18084000 11759 21943 18972 23250 23825 25982 22335 17097 21656 15445 TRUE FALSE 12659.27808 20853.34253 19604.51701 21350.40063 22889.51079 26970.76322 19402.38767 19331.6366 23539.59973 14941.03091 0.847282771 1.39570975 1.312126126 1.428977742 1.531990056 1.805147407 1.298597652 1.293862299 1.57550037 1 13.86699208 -4.752808725 4.45575812 1.427919935 0.791778589 0.404182654 0.201565512 0.219443509 9.299481326 0.049755027 0.455248798 1.77E-05 4.752808725 -0.636141346 SLLGDSAPTLHLNKGT(ph)PSQSPVVGR ddPTM_A459_MK2206_30min_R2 1 SLLGDSAPTLHLNKGTPSQSPVVGR 25 1 P52594-2;P52594-3;P52594;P52594-4;C9J2I0;B8ZZY2 P52594-2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 1 SLLGDSAPT(0.001)LHLNKGT(0.965)PS(0.024)QS(0.009)PVVGR 67.56 0.00099949 10204000 22651 49229 44585 49654 54058 60917 48870 33242 62840 41981 TRUE FALSE 24385.17798 46784.35945 46071.44165 45597.10936 51935.4113 63235.23912 42453.3103 37586.84354 68305.70961 40611.16341 0.600455046 1.152007367 1.134452643 1.122772793 1.27884569 1.557090066 1.045360604 0.925529839 1.681944172 1 15.30958874 -4.528788194 1.868631977 1.223556254 1.74E-14 0.395617722 0.226936272 2.016300184 4.087487635 0.060155765 5.408730173 2.96E-05 4.528788194 -1.223556254 SLLGLDSGELQSGPESSS(ph)SPGVHVR ddPTM_A459_MK2206_30min_R1 2 SLLGLDSGELQSGPESSSSPGVHVR 25 0 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4 P49815 TSC2 Tuberin 1 SLLGLDSGELQSGPES(0.004)S(0.01)S(0.619)S(0.367)PGVHVR;SLLGLDSGELQSGPES(0.01)S(0.074)S(0.567)S(0.348)PGVHVR 139.56 1.71E-08 9398600 2439.7 1561.23 1998.34 1645.4 2782.1 2902 3419.3 3102.8 2218.44 2358.2 TRUE FALSE 2232.190704 1459.593643 1862.698248 1772.128993 2671.283066 3066.308732 3191.204736 3075.672547 2449.054777 2650.35162 0.842224363 0.550716981 0.702811746 0.668639202 1.007897611 1.156944124 1.204068438 1.16047717 0.924049005 1 11.37196806 -6.347768446 3.528714421 1.104685439 0.679497541 0.773526209 0.102239331 0.10713127 2.541579903 0.032679232 0.038031165 4.49E-07 6.347768446 -0.425187898 SLLGLDSGELQSGPESSS(ph)SPGVHVR ddPTM_A459_MK2206_30min_R2 1 SLLGLDSGELQSGPESSSSPGVHVR 25 0 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4 P49815 TSC2 Tuberin 1 SLLGLDSGELQSGPES(0.058)S(0.277)S(0.563)S(0.101)PGVHVR 136.8 2.54E-08 4001000 13720 23097 20373 32444 30215 31163 29944 23764 34364 28068 TRUE FALSE 14770.41375 21950.03657 21052.22565 29793.22142 29028.60728 32348.9298 26012.31683 26870.03639 37352.9186 27152.14346 0.543987025 0.808408979 0.775343047 1.097269594 1.069109234 1.191395068 0.95802075 0.989610136 1.375689498 1 14.72877847 -5.277829409 1.021324666 1.104577799 0.512749739 0.670574363 0.12644679 0.581776565 0.826548306 0.043656702 0.315773953 5.27E-06 5.277829409 -0.59182806 SLLGLSNS(ph)EPNGSVETK ddPTM_A459_MK2206_30min_R2 1 SLLGLSNSEPNGSVETK 17 0 Q13033-2;Q13033;G3V340;G3V3G7 Q13033-2 STRN3 Striatin-3 1 S(0.135)LLGLS(0.051)NS(0.814)EPNGSVETK 122.33 0.0013931 3159700 11831 10456 11096 12253 9164.5 10386 10891 10414 7211.2 11434 TRUE FALSE 12736.79046 9936.770244 11465.9351 11251.8907 8804.655682 10781.24651 9460.998618 11775.14556 7838.417141 11060.90952 1.151513846 0.898368279 1.036617747 1.017266319 0.796015524 0.974716093 0.85535449 1.064572994 0.708659367 1 13.4331824 -6.154596653 16.332358 0.904631216 1.017639777 0.232222765 0.111681306 3.485282646 524.5681399 0.030618643 0.039529655 7.00E-07 6.154596653 0.113008561 SLLLEPPRGT(ph)PDR ddPTM_A459_MK2206_30min_R2 1 SLLLEPPRGTPDR 13 1 Q53GT1-3;Q53GT1 Q53GT1-3 KLHL22 Kelch-like protein 22 1 SLLLEPPRGT(1)PDR 91.076 0.028062 9915900 19268 25539 19081 25549 20697 24290 24255 18906 18412 21775 TRUE FALSE 20743.17289 24270.7704 19717.15102 23461.56497 19884.33179 25214.37297 21070.28936 21377.07911 20013.44248 21064.48353 0.984746332 1.152212935 0.936037714 1.113797304 0.943974333 1.197008839 1.000275622 1.014839936 0.95010364 1 14.36252492 -7.491966813 24.99801733 0.990994532 1.055276625 0.126861308 0.081738452 1370.510757 1108314.561 0.031923576 0.021492601 3.22E-08 7.491966813 0.064282093 SLLS(ph)PLHR ddPTM_A459_MK2206_30min_R1 1 SLLSPLHR 8 0 Q9BY84 Q9BY84 DUSP16 Dual specificity protein phosphatase 16 1 SLLS(1)PLHR 87.568 0.021358 5320600 3159.4 3273.7 3320.1 2747.3 2988 2296.2 2956.8 2342.8 1999.2 1817.9 TRUE FALSE 2890.676439 3060.581535 3094.740862 2958.897522 2868.981633 2426.20886 2759.557267 2322.317147 2207.023994 2043.115176 1.41483773 1.497997553 1.51471679 1.448228448 1.404219236 1.187504693 1.350661626 1.136655032 1.080224952 1 10.99655482 -7.441399548 0.564590556 0.996104166 1.500073592 0.869266215 0.063805701 0.278829132 0.185068499 0.060850724 0.043056895 3.62E-08 7.441399548 0.503969427 SLLS(ph)PLHR ddPTM_A459_MK2206_30min_R2 3 SLLSPLHR 8 0 Q9BY84 Q9BY84 DUSP16 Dual specificity protein phosphatase 16 1 SLLS(1)PLHR;SLLS(1)PLHR;SLLS(1)PLHR 93.096 0.016234 7410400 43116 52409 43486 54923 50956 53537 48463 35876 33008.9 33929.8 TRUE FALSE 46416.99411 49806.44527 44935.80154 50435.61521 48955.21141 55574.38805 42099.74989 40565.11638 35879.95446 32822.6734 1.414174694 1.517440236 1.369047578 1.536608995 1.491505911 1.693170674 1.282642318 1.235887031 1.0931454 1 15.00240513 -7.82502898 1.644285514 1.047596697 1.496714825 0.788798735 0.092984488 0.176474872 0.892358133 0.075337697 0.028204075 1.50E-08 7.82502898 0.449118128 SLLS(ph)SPTK ddPTM_A459_MK2206_30min_R1 1 SLLSSPTK 8 0 Q92667-2;Q92667;I3NI36 Q92667-2 AKAP1 "A-kinase anchor protein 1, mitochondrial" 1 SLLS(0.499)S(0.499)PT(0.001)K 106.18 0.013838 36446000 9878.1 11275 7476.7 8953.8 8748.1 9607.5 10909 8747.1 12586 12779 TRUE FALSE 9037.915723 10540.99545 6969.202435 9643.423227 8399.644653 10151.46835 10181.28051 8670.625027 13894.35974 14362.159 0.629286706 0.733942261 0.485247548 0.671446628 0.584845541 0.706820496 0.70889624 0.603713204 0.967428347 1 13.80998502 -8.267425295 23.43780571 0.983714381 0.64212648 0.79698881 0.069279383 90.34418025 353728.8951 0.059372021 0.017022409 5.40E-09 8.267425295 -0.3415879 SLLS(ph)SPTK ddPTM_A459_MK2206_30min_R2 1 SLLSSPTK 8 0 Q92667-2;Q92667;I3NI36 Q92667-2 AKAP1 "A-kinase anchor protein 1, mitochondrial" 1 SLLS(0.607)S(0.392)PTK 98.044 0.019779 15405000 195960 119720 138440 123000 106390 116750 196610 111450 131460 141520 TRUE FALSE 210962.8483 113774.8789 143055.5205 112950.5065 102212.594 121193.0031 170794.8708 126016.8977 142894.1532 136902.214 1.540974701 0.831066756 1.044946728 0.825045142 0.746610234 0.885252324 1.247568362 0.920488384 1.043768023 1 17.06278625 -4.754569419 24.99976064 0.947004649 1.540975717 0.629804939 0.136048908 162.6971835 592002.1444 0.035371723 0.34050779 1.76E-05 4.754569419 0.593971068 SLLSS(ph)PTK ddPTM_A459_MK2206_30min_R1 1 SLLSSPTK 8 0 Q92667-2;Q92667;I3NI36 Q92667-2 AKAP1 "A-kinase anchor protein 1, mitochondrial" 1 SLLS(0.109)S(0.889)PT(0.002)K 135.43 0.0026584 42651000 12886 14075 8997 10987 11614 10912 13406 10539 15085 14659 TRUE FALSE 11789.97803 13158.71494 8386.308707 11833.22064 11151.38979 11529.82801 12511.7102 10446.85863 16653.13973 16475.06759 0.715625473 0.798704762 0.509030307 0.718250203 0.676864585 0.699834944 0.759433012 0.634101109 1.010808583 1 14.00799676 -8.267088194 24.78492569 1.005404365 0.689921698 0.746865198 0.073684179 209.8843889 920878.9842 0.063298311 0.01816134 5.41E-09 8.267088194 -0.315482668 SLLSS(ph)PTK ddPTM_A459_MK2206_30min_R2 3 SLLSSPTK 8 0 Q92667-2;Q92667;I3NI36 Q92667-2 AKAP1 "A-kinase anchor protein 1, mitochondrial" 1 SLLS(0.147)S(0.853)PTK;SLLS(0.115)S(0.885)PTK;SLLS(0.14)S(0.859)PTK 151.83 0.0010877 84145000 2513280 1506210 1759690 1713390 1498760 1526350 2767810 1645080 1742250 2021400 TRUE FALSE 2705698.649 1431413.802 1818357.186 1573400.556 1439911.152 1584436.319 2404393.222 1860097.604 1893787.756 1955441.884 1.38367633 0.732015517 0.929895796 0.804626601 0.736361006 0.810270217 1.229590735 0.951241568 0.968470488 1 20.89906323 -7.220789691 24.99810554 1.033262864 0.881519787 0.108179954 0.189602151 1076.607045 662075.6594 0.071217106 0.055163884 6.01E-08 7.220789691 -0.151743077 SLMS(ph)S(ph)PEDLTKDFEELKAEEVDVTK ddPTM_A459_MK2206_30min_R1 1 SLMSSPEDLTKDFEELKAEEVDVTK 25 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(0.014)LMS(0.944)S(0.944)PEDLT(0.097)KDFEELKAEEVDVTK 60.635 0.0059697 6672500 1401.3 2220.6 2097.2 2424.9 1058.4 832.47 1182.3 1695.9 1312.4 904.9 TRUE FALSE 1282.112076 2076.038536 1954.847907 2611.666218 1016.241687 879.603732 1103.430924 1681.072925 1448.828676 1017.005844 1.260673264 2.041324098 1.922159955 2.567995292 0.999248621 0.864895455 1.084979925 1.652962897 1.424602116 1 9.990112254 -6.283420256 24.98941542 1.184145229 1.952853057 0.52233784 0.363832697 683.8468224 777443.3189 0.118431609 0.134394503 5.21E-07 6.283420256 0.768707829 SLMS(ph)SPEDLTK ddPTM_A459_MK2206_30min_R1 1 SLMSSPEDLTK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SLMS(0.947)S(0.053)PEDLTK 158.34 0.0021697 10067000 7026 7787.3 7951.3 6423.3 5630.1 5903 7890.6 6754.6 9928.4 10069 TRUE FALSE 6428.401805 7280.345355 7411.58791 6918.023679 5405.841195 6237.222759 7364.232471 6695.545244 10960.49271 11316.42374 0.568059482 0.643343297 0.654940826 0.611325967 0.477698725 0.551165536 0.650756161 0.591666184 0.968547393 1 13.46613048 -8.274163849 5.510002671 0.993046546 0.593800501 0.903787001 0.051003962 0.051022142 5.536837816 0.048144364 0.014197962 5.32E-09 8.274163849 -0.399246045 SLMS(ph)SPEDLTK ddPTM_A459_MK2206_30min_R2 4 SLMSSPEDLTK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SLMS(0.583)S(0.417)PEDLTK;S(0.004)LMS(0.597)S(0.399)PEDLTK;SLMS(0.739)S(0.261)PEDLTK;SLMS(0.5)S(0.5)PEDLTK 181.66 4.09E-05 56221800 201645 178926 192697 170145 164680 137807 226967 180862 147732 219550 TRUE FALSE 217083.0962 170040.795 199121.4218 156243.6092 158213.8357 143051.342 197165.9603 204501.2844 160581.4623 212386.1015 1.022115358 0.800621104 0.937544502 0.735658351 0.744934978 0.6735438 0.928337395 0.96287508 0.756082725 1 17.69632983 -9.778608837 10.87474207 0.999968528 0.837313385 0.158231236 0.110400133 0 0 0.109457311 0.026547297 1.66E-10 9.778608837 -0.162655143 SLMS(ph)SPEDLTKDFEELKAEEVDVTK ddPTM_A459_MK2206_30min_R1 1 SLMSSPEDLTKDFEELKAEEVDVTK 25 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.016)LMS(0.492)S(0.492)PEDLTKDFEELKAEEVDVTK 66.041 0.0091785 62134000 4926.3 6894.5 6999.8 7513.5 4046 3440 4422.4 5922.5 5694.8 3629 TRUE FALSE 4507.292316 6445.666797 6524.673079 8092.191072 3884.839252 3634.769827 4127.389765 5870.720207 6286.794839 4078.587918 1.105110986 1.580367256 1.599738245 1.984066848 0.952496141 0.891183395 1.011965378 1.439400186 1.541414569 1 11.99385404 -6.281603941 24.94341679 1.142596399 1.570568311 0.362556046 0.277933783 955.8108929 1182327.852 0.092832244 0.105390955 5.23E-07 6.281603941 0.427971913 SLMSS(ph)PEDLTK ddPTM_A459_MK2206_30min_R1 5 SLMSSPEDLTK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SLMS(0.225)S(0.775)PEDLTK;SLMS(0.063)S(0.937)PEDLTK;SLMS(0.032)S(0.968)PEDLTK;SLMS(0.048)S(0.951)PEDLT(0.001)K;SLMS(0.228)S(0.772)PEDLTK 238.07 2.27E-10 170868000 29990.1 35639.1 34966.1 27113.44 25370.2 26705.07 34789.7 28511.21 42622.4 47048.9 TRUE FALSE 27439.28451 33318.98811 32592.69855 29201.72185 24359.65121 28217.08799 32468.94259 28261.9395 47053.15101 52877.67293 0.518920047 0.630114494 0.616379215 0.55225051 0.460679335 0.533629534 0.614038795 0.534477747 0.889849125 1 15.69037107 -8.36159622 3.498401091 0.994653544 0.558713217 0.905089202 0.050628932 0.068155608 1.465319833 0.051675845 0.013866566 4.35E-09 8.36159622 -0.435940328 SLMSS(ph)PEDLTK ddPTM_A459_MK2206_30min_R2 6 SLMSSPEDLTK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SLMS(0.068)S(0.932)PEDLTK;SLMS(0.073)S(0.927)PEDLTK;SLMS(0.132)S(0.868)PEDLTK;SLMS(0.001)S(0.999)PEDLTK;SLMS(0.015)S(0.985)PEDLTK;SLMS(0.014)S(0.986)PEDLTK 181.98 3.91E-05 110533800 564358 471034 496579 446869 468834 352848 624691 463705 383091 644051 TRUE FALSE 607565.6824 447643.1365 513134.696 410358.3732 450425.2215 366275.8779 542668.3213 524312.8356 416411.5627 623035.6686 0.975169983 0.718487173 0.823604044 0.658643468 0.722952544 0.587889099 0.871006828 0.841545456 0.668359106 1 19.24895523 -9.90440732 7.899832439 0.999999997 0.759620641 0.29457398 0.10987595 0 0 0.105110064 0.025492935 1.25E-10 9.90440732 -0.240379356 SLMSSPEDLT(ph)KDFEELKAEEVDVTK ddPTM_A459_MK2206_30min_R1 2 SLMSSPEDLTKDFEELKAEEVDVTK 25 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.017)LMS(0.314)S(0.314)PEDLT(0.355)KDFEELKAEEVDVTK;S(0.025)LMS(0.316)S(0.316)PEDLT(0.343)KDFEELKAEEVDVTK 62.064 0.0021408 17086000 3434.54 3794.65 4054.84 4677.3 2775.8 1984.53 2635.82 3839.65 3298.21 2123.77 TRUE FALSE 3142.414338 3547.617595 3779.608758 5037.546456 2665.234008 2096.892374 2459.989257 3806.080345 3641.070732 2386.878661 1.316537111 1.486299933 1.583494301 2.110516357 1.116618977 0.878508157 1.030630211 1.594584763 1.525452798 1 11.22090951 -6.362386848 22.56803075 1.197049381 1.61198405 0.361907812 0.281565625 22.65001786 5055.062627 0.095202936 0.107949999 4.34E-07 6.362386848 0.414934669 SLMSSPEDLTKDFEELKAEEVDVTK ddPTM_A459_MK2206_30min_R1 1 SLMSSPEDLTKDFEELKAEEVDVTK 25 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 48.198 0.02565 8001700 1166.2 1399.9 1507.8 1793.4 1038 746.18 689.7 1264.4 1151.9 802.06 FALSE TRUE 1067.008566 1308.766256 1405.454737 1931.527979 996.654262 788.4280668 643.6913714 1253.345484 1271.644127 901.425248 1.18369057 1.45188551 1.559147295 2.142748922 1.105642719 0.874646088 0.714081809 1.390404237 1.410703916 1 9.816064049 -6.47803554 24.97082285 1.069682131 1.579490285 0.407449317 0.29649946 473.1660033 263481.2566 0.098429423 0.111603206 3.33E-07 6.47803554 0.509808154 SLNFQEDDDT(ph)SRETFASDTNEALASLDESQEGHAEAK ddPTM_A459_MK2206_30min_R1 1 SLNFQEDDDTSRETFASDTNEALASLDESQEGHAEAK 37 1 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 1 S(0.005)LNFQEDDDT(0.199)S(0.199)RET(0.199)FAS(0.199)DT(0.199)NEALAS(0.002)LDESQEGHAEAK 81.133 5.27E-07 11251000 1031.2 1036.6 1037.6 742.13 1005.8 835.43 965.59 793.85 632.54 765.91 TRUE FALSE 943.491025 969.1171516 967.1706029 799.2889812 965.7368562 882.7313246 901.1772529 786.9094531 698.2947966 860.7967131 1.096067179 1.125837421 1.123576087 0.928545578 1.121910483 1.025481756 1.046910658 0.914164101 0.811219172 1 9.749528759 -7.753638289 3.606797363 0.891626221 1.068682915 0.515621792 0.070429698 0.174122019 4.79987488 0.03949593 0.01921431 1.76E-08 7.753638289 0.177056694 SLNFQEDDDTS(ph)R ddPTM_A459_MK2206_30min_R2 2 SLNFQEDDDTSR 12 0 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 1 SLNFQEDDDT(0.231)S(0.769)R;SLNFQEDDDT(0.215)S(0.785)R 151.49 0.00052111 10361200 115095 72815 85778 81811 61774 70797 92002 68877 53668 89349 TRUE FALSE 123906.7617 69199.11298 88637.79571 75126.7796 59348.44237 73491.22944 79922.02689 77879.46039 58335.94563 86433.54945 1.433549385 0.800604782 1.025502207 0.869185404 0.686636645 0.850262773 0.924664409 0.901032769 0.674922481 1 16.39930379 -4.757963258 24.99727466 0.857991185 1.433550193 0.710645171 0.109945063 53.72260755 386266.9022 0.027177133 0.193329822 1.75E-05 4.757963258 0.575559008 SLNFQEDDDTSRETFAS(ph)DTNEALASLDESQEGHAEAK ddPTM_A459_MK2206_30min_R1 1 SLNFQEDDDTSRETFASDTNEALASLDESQEGHAEAK 37 1 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 1 S(0.014)LNFQEDDDT(0.105)S(0.105)RET(0.105)FAS(0.335)DT(0.335)NEALAS(0.002)LDESQEGHAEAK 83.265 1.27E-07 14267000 1010.4 871.11 1164.4 1035.5 948.85 1016.6 905.85 1044.9 759.02 926.29 TRUE FALSE 924.4601742 814.4005807 1085.363772 1115.254389 911.0552953 1074.159013 845.4223993 1035.764549 837.9228452 1041.045798 0.888011052 0.782290829 1.042570628 1.071282734 0.875134693 1.031807645 0.812089536 0.994926977 0.80488567 1 10.02381782 -5.250225503 24.97993996 0.95297626 0.835150941 0.208973211 0.092540072 1126.045167 2508357.839 0.023015162 0.059719673 5.62E-06 5.250225503 -0.117825319 SLPAPVAQRPDS(ph)PGGGLQAPGQK ddPTM_A459_MK2206_30min_R1 2 SLPAPVAQRPDSPGGGLQAPGQK 23 1 Q5JVS0-2;Q5JVS0 Q5JVS0-2 HABP4 Intracellular hyaluronan-binding protein 4 1 S(0.006)LPAPVAQRPDS(0.994)PGGGLQAPGQK;SLPAPVAQRPDS(1)PGGGLQAPGQK 94.295 4.74E-05 186556000 11930.5 11505.4 11301.9 9749.7 11758.1 10279.9 11761.5 10579.3 11994.5 11361 TRUE FALSE 10915.74833 10756.39637 10534.75852 10500.62358 11289.74998 10861.93905 10976.9118 10486.8063 13241.3712 12768.48645 0.854897592 0.842417495 0.825059302 0.822385928 0.884188586 0.850683368 0.859687782 0.821303788 1.037035302 1 13.6402999 -8.262589057 24.99991633 1.018517672 0.845543131 0.922444574 0.020115765 25.23709761 548748.3496 0.016401686 0.005142101 5.46E-09 8.262589057 -0.172974542 SLPAPVAQRPDS(ph)PGGGLQAPGQK ddPTM_A459_MK2206_30min_R2 4 SLPAPVAQRPDSPGGGLQAPGQK 23 1 Q5JVS0-2;Q5JVS0 Q5JVS0-2 HABP4 Intracellular hyaluronan-binding protein 4 1 SLPAPVAQRPDS(1)PGGGLQAPGQK;SLPAPVAQRPDS(1)PGGGLQAPGQK;SLPAPVAQRPDS(1)PGGGLQAPGQK;SLPAPVAQRPDS(1)PGGGLQAPGQK 112.42 7.39E-06 468149000 295001 303856 308079 323270 315010 279002 339183 280045 260721 333371 TRUE FALSE 317586.5034 288766.9529 318350.2001 296857.8069 302641.1246 289619.6166 294647.8647 316647.843 283398.0413 322493.1316 0.984785325 0.895420474 0.987153427 0.920508928 0.938442078 0.898064449 0.913656248 0.981874688 0.878772332 1 18.29890891 -10.58268962 4.736159291 1.000002352 0.93326924 0.221311139 0.037597839 8.64E-07 1.72E-07 0.033680015 0.008168315 2.61E-11 10.58268962 -0.066733112 SLPELDRDKS(ph)DSDTEGLLFSR ddPTM_A459_MK2206_30min_R2 1 SLPELDRDKSDSDTEGLLFSR 21 2 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(0.003)LPELDRDKS(0.902)DS(0.094)DT(0.001)EGLLFSR 64.331 0.0042823 5418400 13179 19157 18736 15169 19189 15540 19206 13701 15400 18587 TRUE FALSE 14187.99437 18205.69124 19360.64889 13929.64418 18435.54344 16131.38559 16684.22913 15491.76774 16739.46416 17980.50771 0.789076404 1.012523758 1.076757631 0.774708056 1.025307168 0.897159627 0.927906453 0.86158678 0.930978392 1 14.13414614 SLPS(ph)QSPPR ddPTM_A459_MK2206_30min_R2 1 SLPSQSPPR 9 0 H7BYJ1 H7BYJ1 RNF34 1 S(0.005)LPS(0.963)QS(0.032)PPR 79.201 0.032771 2507200 992.25 10184 5079.6 23394 11831 41305 6010 10950 27899 3539.8 TRUE FALSE 1068.217423 9678.277369 5248.951329 21482.63537 11366.45549 42876.89072 5220.879781 12381.2026 30325.60459 3424.296616 0.311952364 2.826354856 1.532855333 6.273590689 3.319354825 12.52137169 1.524657577 3.615692209 8.856009859 1 11.74159196 -5.755389818 24.92611452 5.471379518 1.683983106 0.211779635 3.296310322 216.2287745 890918.9977 0.877421245 1.470815941 1.76E-06 5.755389818 -3.787396412 SLPSSS(ph)QLKGSPQAISR ddPTM_A459_MK2206_30min_R2 1 SLPSSSQLKGSPQAISR 17 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 S(0.001)LPS(0.043)S(0.209)S(0.689)QLKGS(0.058)PQAISR 94.538 0.03207 9621500 17593 17681 13961 23878 25784 26374 23881 22178 17723 18125 TRUE FALSE 18939.93361 16802.98725 14426.45277 21927.09102 24771.59061 27377.68105 20745.39601 25076.74075 19264.5145 17533.58273 1.080208985 0.958331649 0.822789785 1.250576756 1.412808265 1.561442488 1.183180661 1.430212018 1.09872094 1 14.0978332 -5.870853497 6.000361818 1.312953902 0.956190817 0.431565122 0.167402467 0.173492118 8.512462541 0.046253796 0.069512245 1.35E-06 5.870853497 -0.356763085 SLPSSSQLKGS(ph)PQAISR ddPTM_A459_MK2206_30min_R2 1 SLPSSSQLKGSPQAISR 17 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 SLPSSSQLKGS(0.982)PQAIS(0.018)R 154.48 0.00038724 9940000 13250 17130 20838 22521 21016 21691 29754 17540 16691 23012 TRUE FALSE 14264.43019 16279.34911 21532.72852 20680.96226 20190.80624 22516.4662 25847.26406 19832.53822 18142.75301 22261.12032 0.640777732 0.731290648 0.967279643 0.929017136 0.906998657 1.011470486 1.161094486 0.890904767 0.814997302 1 14.44223858 -5.154082435 2.882910846 0.963985101 0.648651101 0.62104779 0.086772334 0.190298434 2.94177987 0.02484149 0.091048266 7.01E-06 5.154082435 -0.315333999 SLPTPAVLLS(ph)PTK ddPTM_A459_MK2206_30min_R2 1 SLPTPAVLLSPTK 13 0 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 SLPTPAVLLS(0.934)PT(0.066)K 77.776 0.042433 6383300 25072 15134 20121 19237 15250 15812 23072 14763 11966 25125 TRUE FALSE 26991.5316 14382.46757 20791.8241 17665.27556 14651.20837 16413.73674 20042.61869 16692.57479 13006.78105 24305.17331 1.110526194 0.591745115 0.855448502 0.726811339 0.602802053 0.675318646 0.824623566 0.686791021 0.535144551 1 14.5689758 -4.75028566 24.99388848 0.714620301 1.110527051 0.435116917 0.132535209 445.4775832 998187.3108 0.03112666 0.465963945 1.78E-05 4.75028566 0.395906751 SLPTPAVLLS(ph)PTKEPPPLLAK ddPTM_A459_MK2206_30min_R2 2 SLPTPAVLLSPTKEPPPLLAK 21 1 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 SLPT(0.002)PAVLLS(0.858)PT(0.141)KEPPPLLAK;SLPT(0.001)PAVLLS(0.923)PT(0.076)KEPPPLLAK 107.63 7.17E-05 133736000 419940 332730 351750 328240 337430 211900 453720 335800 247870 416540 TRUE FALSE 452090.9293 316207.112 363477.1694 301421.742 324180.8028 219964.003 394146.019 379690.213 269429.2846 402948.3339 1.121957559 0.784733638 0.902044106 0.748040671 0.804522008 0.545886369 0.978155227 0.942280141 0.668644741 1 18.62023534 -4.758139872 24.97128368 0.813870276 1.121957993 0.308530719 0.135673599 113.4185696 858231.4041 0.033086269 0.232256436 1.75E-05 4.758139872 0.308087716 SLPTPAVLLS(ph)PTKEPPPLLAKPK ddPTM_A459_MK2206_30min_R1 1 SLPTPAVLLSPTKEPPPLLAKPK 23 2 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 SLPT(0.019)PAVLLS(0.491)PT(0.491)KEPPPLLAKPK 56.529 0.0068332 64935000 7376.3 7222 7265.3 7496.2 5933.9 5030.9 5657.1 6798.3 6132.1 5202.9 TRUE FALSE 6748.906951 6751.846487 6772.151678 8073.558623 5697.540198 5315.74521 5279.725181 6738.86318 6769.553739 5847.474532 1.154157562 1.154660264 1.158132736 1.380691541 0.97435913 0.909066843 0.902906913 1.152439937 1.157688452 1 12.51359796 -6.293227968 24.99439669 1.012689856 1.203980005 0.470511127 0.101596584 659.6468556 518658.3694 0.034403145 0.039012672 5.09E-07 6.293227968 0.191290149 SLPTPAVLLS(ph)PTKEPPPLLAKPK ddPTM_A459_MK2206_30min_R2 2 SLPTPAVLLSPTKEPPPLLAKPK 23 2 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;A0A3B3ISX8 Q8WX93 PALLD Palladin 1 SLPT(0.009)PAVLLS(0.781)PT(0.209)KEPPPLLAKPK;SLPTPAVLLS(0.5)PT(0.5)KEPPPLLAKPK 65.022 0.0017685 48281200 72587.2 83910.7 75803.5 67409.8 91757.6 58536.4 96141.7 66198.7 63742.5 82776.1 TRUE FALSE 78144.53184 79743.81666 78330.75086 61902.20371 88154.73558 60764.04372 83518.1793 74851.09738 69286.70743 80075.12264 0.975890255 0.99586256 0.978215809 0.773051625 1.100900413 0.758837973 1.042997832 0.934760946 0.865271325 1 16.28906648 -5.556312644 24.99978332 0.923700983 0.986167719 0.063630099 0.102500693 489.3742857 365921.3478 0.025925436 0.044904467 2.78E-06 5.556312644 0.062466737 SLPTTVPES(ph)PNYR ddPTM_A459_MK2206_30min_R1 9 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(0.811)PNY(0.189)R;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTT(0.004)VPES(0.996)PNYR;SLPTT(0.001)VPES(0.999)PNYR;SLPTTVPES(1)PNYR 231.07 3.72E-13 2483077700 45501.8 41555.5 42136.3 37457.9 43069.2 31685.8 32091.8 28218.42 24330.76 19970.97 TRUE FALSE 41631.63297 38850.2294 39276.20535 40342.91395 41353.66256 33479.82261 29951.01458 27971.70933 26860.02957 22445.12454 1.854818533 1.730898367 1.749876918 1.797402099 1.842434088 1.491630067 1.33441071 1.246226515 1.196697729 1 14.45411448 -7.284891742 1.069836627 1.108364043 1.80277863 0.941989581 0.071256345 0.119726617 0.265196099 0.052795085 0.029411182 5.19E-08 7.284891742 0.694414587 SLPTTVPES(ph)PNYR ddPTM_A459_MK2206_30min_R2 11 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(0.999)PNY(0.001)R;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTT(0.017)VPES(0.978)PNY(0.005)R;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR 240.18 8.57E-18 2791816500 526843 611661 549548 669598 551247 537961 471618 370675 364580 342343 TRUE FALSE 567178.5052 581286.8042 567869.656 614889.7015 529602.273 558433.4828 409693.9901 419123.4952 396290.5094 331172.3759 1.712638331 1.755239405 1.714725313 1.856705891 1.59917406 1.686232075 1.237101944 1.265575047 1.196629122 1 18.33722281 -7.354243276 1.115005115 1.103662997 1.757673564 0.909159628 0.084942354 0.13658949 0.324588446 0.05909504 0.031097108 4.42E-08 7.354243276 0.654010567 SLQARPVS(ph)MPVDR ddPTM_A459_MK2206_30min_R2 1 SLQARPVSMPVDR 13 1 Q4KWH8-2;A0A2U3TZV8;Q4KWH8;Q4KWH8-3;Q4KWH8-4 Q4KWH8-2 PLCH1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1" 1 S(0.001)LQARPVS(0.999)MPVDR 64.534 0.043244 10471000 12364 19466 16526 22106 17935 17056 22788 15249 22766 15015 TRUE FALSE 13310.59735 18499.34675 17076.96859 20299.86909 17230.78178 17705.07803 19795.90823 17242.09666 24746.14553 14525.06178 0.916388346 1.273615701 1.175689911 1.397575404 1.186279415 1.218933062 1.362879451 1.187058404 1.703686077 1 13.82625668 -4.287482844 1.666722639 1.28963038 1.82E-10 0.268866999 0.177022467 5.904784418 5.154106703 0.045344467 18.48034959 5.16E-05 4.287482844 -1.28963038 SLQEEQSRPPTAVS(ph)SPGGPAR ddPTM_A459_MK2206_30min_R1 1 SLQEEQSRPPTAVSSPGGPAR 21 1 A0A087X0M4;Q9BWU0 A0A087X0M4 SLC4A1AP Kanadaptin 1 SLQEEQSRPPT(0.001)AVS(0.74)S(0.259)PGGPAR 89.604 0.00043843 12545000 1827.2 1685.2 1561 1496.9 1612.3 1580.6 1618 1453.7 1463.3 1283.2 TRUE FALSE 1671.787045 1575.493174 1455.043669 1612.191497 1548.078677 1670.092206 1510.066172 1440.990454 1615.415271 1442.172504 1.159214339 1.092444329 1.008924845 1.117890886 1.073435163 1.15803914 1.047077356 0.999180369 1.120126245 1 10.49402803 -8.947196094 0.01127117 1.18E-07 2.098310472 0.229361323 0.051652354 2855.115926 14.40804911 1375.17394 1305.273169 1.13E-09 8.947196094 2.098310354 SLQEEQSRPPTAVSS(ph)PGGPAR ddPTM_A459_MK2206_30min_R1 2 SLQEEQSRPPTAVSSPGGPAR 21 1 A0A087X0M4;Q9BWU0 A0A087X0M4 SLC4A1AP Kanadaptin 1 SLQEEQSRPPTAVS(0.173)S(0.827)PGGPAR;SLQEEQS(0.001)RPPT(0.027)AVS(0.283)S(0.689)PGGPAR 90.755 0.00039203 21611000 3375.9 3553.2 3624 2975.5 3706.3 3096.3 2981.3 2977.1 2839.5 2529.4 TRUE FALSE 3088.761977 3321.886034 3378.012977 3204.673526 3558.670223 3271.60983 2782.422917 2951.071529 3134.676186 2842.761168 1.086535869 1.168542075 1.188285887 1.127310152 1.251835808 1.150856381 0.978774773 1.038100408 1.102687141 1 11.47307718 -7.170699889 6.500859329 1.033460669 1.167173489 0.629076835 0.049751378 0.161512943 9.685504431 0.019148417 0.014781833 6.75E-08 7.170699889 0.13371282 SLQEEQSRPPTAVSS(ph)PGGPAR ddPTM_A459_MK2206_30min_R2 1 SLQEEQSRPPTAVSSPGGPAR 21 1 A0A087X0M4;Q9BWU0 A0A087X0M4 SLC4A1AP Kanadaptin 1 SLQEEQSRPPTAVS(0.474)S(0.526)PGGPAR 178.56 1.73E-13 4919000 29725 36837 25015 32297 30803 32505 31238 28731 30987 30478 TRUE FALSE 32000.76885 35007.72815 25848.98761 29658.23179 29593.51945 33742.00055 27136.41308 32486.24035 33682.19325 29483.50536 1.085378705 1.187366554 0.876727082 1.005926243 1.003731378 1.14443653 0.920393038 1.101844572 1.142408029 1 14.84762044 SLQTT(ph)SPPVVAPGNENGLAVPVPLRK ddPTM_A459_MK2206_30min_R2 1 SLQTTSPPVVAPGNENGLAVPVPLRK 26 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 S(0.161)LQT(0.138)T(0.35)S(0.35)PPVVAPGNENGLAVPVPLRK 71.78 0.0070669 0 6667.4 9707.3 7608.5 9983.7 10937 9264.7 10617 6844 7506.5 11001 TRUE FALSE 7177.86127 9225.249598 7862.163593 9167.999774 10507.55843 9617.274651 9222.975147 7738.534299 8159.401801 10642.03827 0.674481813 0.866868673 0.738783623 0.861489081 0.987363338 0.903706076 0.86665495 0.727166554 0.766714195 1 13.37748688 -3.986058294 1.140463386 0.858361893 4.42E-12 0.264700199 0.089528211 13.44706789 3.864463551 0.028703975 21.39095964 0.000103262 3.986058294 -0.858361893 SLS(ph)AFQK ddPTM_A459_MK2206_30min_R1 1 SLSAFQK 7 0 G3V498;B7ZAZ8;G3V5M3;G3V3F0;G3V5L9;P36957 G3V498 DLST "Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial" 1 SLS(1)AFQK 92.692 0.026688 11178000 1539.6 1804.4 1315.7 1294.9 1567.7 1331.9 1651.2 1340.1 1211.1 1221 TRUE FALSE 1408.648935 1686.933232 1226.39395 1394.633422 1505.255189 1407.311027 1541.051461 1328.383647 1336.998179 1372.266698 1.026512512 1.229304212 0.893699418 1.016299109 1.096911549 1.02553755 1.122997055 0.968021485 0.974299078 1 10.42234518 -1.522878745 0.168645575 0.988114881 1.385395539 0.068746955 0.085882087 174.5415143 1.87839709 0.229410188 17.45382999 0.03 1.522878745 0.397280658 SLS(ph)AIDR ddPTM_A459_MK2206_30min_R1 1 SLSAIDR 7 0 O95831-3;O95831;O95831-6;O95831-4 O95831-3 AIFM1 "Apoptosis-inducing factor 1, mitochondrial" 1 S(0.008)LS(0.992)AIDR 101.46 0.019909 10098000 4557.6 4014.5 3883.2 3836.9 4168.8 3703.6 4475.5 3863.7 3405.7 4137.6 TRUE FALSE 4169.952187 3753.15532 3619.619203 4132.418703 4002.747868 3913.294631 4176.947561 3829.920078 3759.734702 4650.197125 0.896725897 0.807095962 0.778379734 0.888654522 0.860769503 0.841533063 0.898230214 0.823603812 0.808510822 1 12.18307616 -11.07481435 3.03931677 1.006752803 0.844375806 0.585463416 0.039167984 54054288.1 57609683.34 2960701.276 0.010286535 8.42E-12 11.07481435 -0.162376997 SLS(ph)AIDR ddPTM_A459_MK2206_30min_R2 2 SLSAIDR 7 0 O95831-3;O95831;O95831-6;O95831-4 O95831-3 AIFM1 "Apoptosis-inducing factor 1, mitochondrial" 1 S(0.014)LS(0.986)AIDR;S(0.007)LS(0.993)AIDR 96.034 0.023406 19364200 106067 115366 117483 102559 82127 114405 121069 67289 126420 100169 TRUE FALSE 114187.5711 109637.0922 121399.8246 94179.60163 78902.28132 118758.7624 105172.4949 76083.90334 137415.7831 96900.49373 1.178400302 1.131439975 1.252829783 0.971920761 0.81426088 1.225574379 1.085365934 0.7851756 1.418112311 1 16.5642164 -5.763550281 24.99940515 1.033816931 1.181945018 0.122563289 0.175983313 114.0687472 1350943.74 0.047613502 0.074756838 1.72E-06 5.763550281 0.148128087 SLS(ph)APGNLLTK ddPTM_A459_MK2206_30min_R2 1 SLSAPGNLLTK 11 0 F5GZ00;Q96RR4-6;Q96RR4-5;Q96RR4-2;Q96RR4-3;Q96RR4-4;Q96RR4-7;Q96RR4 F5GZ00 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 1 S(0.004)LS(0.996)APGNLLTK 112.08 0.0078758 3267600 21901 21556 20789 27002 20465 18464 18895 17621 18000 21763 TRUE FALSE 23577.7574 20485.56039 21482.09488 24795.85022 19661.44127 19166.66046 16414.0638 19924.1252 19565.60746 21052.87509 1.119930522 0.973052863 1.020387704 1.177789262 0.933907658 0.910405841 0.779659012 0.946385 0.929355605 1 14.36172965 -6.444783782 7.915985967 0.903664059 1.061839091 0.519411912 0.07322561 0.257049171 23.62604435 0.022989452 0.02602068 3.59E-07 6.444783782 0.158175032 SLS(ph)APLHPEFEEVYR ddPTM_A459_MK2206_30min_R1 2 SLSAPLHPEFEEVYR 15 0 Q53HC0-2;Q53HC0 Q53HC0-2 CCDC92 Coiled-coil domain-containing protein 92 1 S(0.249)LS(0.751)APLHPEFEEVYR;S(0.238)LS(0.762)APLHPEFEEVYR 75.743 0.025201 6561400 3668.4 3485.6 3345.9 3214.3 4266.2 3289.1 3813.8 3351.7 3320.3 3636 TRUE FALSE 3356.383316 3258.686806 3118.78963 3461.865943 4096.26822 3475.326 3559.388361 3322.39644 3665.457067 4086.45513 0.821343489 0.797436091 0.763201731 0.847156235 1.00240137 0.850450057 0.871021031 0.813026531 0.896977197 1 11.99663418 -14.52287875 0.042161745 1.617401033 0.499840879 0.418664862 0.058172242 872.1585741 2.731045991 67.3055564 18.90963007 3.00E-15 14.52287875 -1.117560154 SLS(ph)DFTGPPQLQALK ddPTM_A459_MK2206_30min_R1 2 SLSDFTGPPQLQALK 15 0 O95425-3;O95425;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 S(0.001)LS(0.999)DFTGPPQLQALK;S(0.02)LS(0.98)DFTGPPQLQALK 241.27 3.50E-20 20046900 3717 3773.3 4324.3 3602.3 4412.3 3645.4 3770.3 3452.3 3844.3 3153.1 TRUE FALSE 3400.849631 3527.657484 4030.778564 3879.74977 4236.548748 3851.799398 3518.790166 3422.116905 4243.928742 3543.729833 0.959680842 0.995464567 1.137439578 1.094820981 1.195505568 1.086933705 0.992962312 0.965682224 1.197588118 1 11.7910529 -5.093495008 5.411186218 1.083635608 0.967600087 0.243442571 0.076015868 0.29762115 13.1776697 0.020183551 0.057433896 8.06E-06 5.093495008 -0.116035521 SLS(ph)DFTGPPQLQALK ddPTM_A459_MK2206_30min_R2 1 SLSDFTGPPQLQALK 15 0 O95425-3;O95425;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 S(0.191)LS(0.809)DFTGPPQLQALK 120.92 0.0017351 3813200 13349 16494 19460 16113 17908 16208 18911 13086 15547 16945 TRUE FALSE 14371.0097 15674.93194 20108.78669 14796.51636 17204.84194 16824.8068 16427.96298 14796.38513 16899.24996 16392.08604 0.876704141 0.95624998 1.226737503 0.902662195 1.049582213 1.026398151 1.002188675 0.902654189 1.030939559 1 14.00071184 -7.544122143 24.7398192 0.970562413 1.011617575 0.01451651 0.094972807 899.754824 1047829.11 0.044469121 0.025676573 2.86E-08 7.544122143 0.041055162 SLS(ph)DPIPQR ddPTM_A459_MK2206_30min_R1 1 SLSDPIPQR 9 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 S(0.001)LS(0.999)DPIPQR 87.568 0.032348 6876400 2507.5 2489.5 2581.7 2223.9 2862.9 2468.7 2785.9 1955.5 2358.4 1885.1 TRUE FALSE 2294.223958 2327.433098 2406.461397 2395.185163 2748.864631 2608.475661 2600.057694 1938.40327 2603.56412 2118.64042 1.082875573 1.098550314 1.135851735 1.130529344 1.29746634 1.231202632 1.227229345 0.914927919 1.22888438 1 11.04892304 -11.03456088 6.327119195 0.999878495 1.14936207 0.163100523 0.101744151 0.000179771 1.39E-05 0.101555343 0.024610845 9.24E-12 11.03456088 0.149483575 SLS(ph)DPIPQR ddPTM_A459_MK2206_30min_R2 3 SLSDPIPQR 9 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 S(0.029)LS(0.971)DPIPQR;S(0.341)LS(0.659)DPIPQR;S(0.002)LS(0.998)DPIPQR 93.561 0.024405 17206800 104138 121216 107202 114661 117638 115085 126910 97767 102031 95181 TRUE FALSE 112110.8853 115196.5897 110776.0612 105292.8295 113018.941 119464.6403 110246.5646 110545.4826 110905.472 92075.25176 1.217600639 1.251113491 1.203103538 1.143551905 1.227462742 1.29746743 1.197352844 1.200599297 1.204509027 1 16.49052582 -9.5193769 0.975421118 0.997598377 1.219124696 0.752771403 0.037232701 4.04573599 3.468129376 0.072424883 0.012335202 3.02E-10 9.5193769 0.221526319 SLS(ph)DSESDDSK ddPTM_A459_MK2206_30min_R1 6 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 S(0.312)LS(0.686)DS(0.001)ESDDSK;SLS(0.938)DS(0.056)ES(0.005)DDS(0.001)K;S(0.021)LS(0.913)DS(0.051)ES(0.015)DDSK;SLS(0.642)DS(0.353)ES(0.005)DDSK;S(0.082)LS(0.861)DS(0.02)ES(0.037)DDSK;S(0.003)LS(0.993)DS(0.004)ESDDSK 234.24 1.06E-07 754584600 23858.8 27985.9 25494.1 22932.9 18659.6 17059.4 21810.3 19617.5 16522.3 21304.1 TRUE FALSE 21829.48377 26164.01282 23763.63152 24699.19593 17916.34862 18025.28849 20355.37468 19445.98627 18239.85221 23943.41275 0.911711459 1.092743674 0.992491412 1.031565391 0.748278819 0.752828708 0.850145086 0.812164351 0.761789992 1 14.54734118 -6.254148881 24.9872683 0.80953795 1.012197932 0.5607857 0.080329769 373.6742923 1280721.35 0.022573927 0.02854482 5.57E-07 6.254148881 0.202659982 SLS(ph)DSESDDSK ddPTM_A459_MK2206_30min_R2 5 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 SLS(0.994)DS(0.005)ESDDSK;S(0.112)LS(0.557)DS(0.255)ES(0.076)DDSK;S(0.03)LS(0.967)DS(0.002)ES(0.001)DDSK;S(0.006)LS(0.993)DS(0.001)ESDDSK;S(0.003)LS(0.987)DS(0.009)ESDDSK 166.24 0.0006064 26242800 221083 300288 209398 242784 213674 188434 258251 206088 171200 244988 TRUE FALSE 238009.2845 285376.1346 216379.2248 222947.7706 205284.0851 195604.9879 224342.3335 233024.4092 186090.6665 236994.0616 1.004283748 1.204148883 0.913015387 0.940731464 0.866199278 0.825358182 0.946615843 0.983249992 0.78521236 1 17.85449138 -5.285854529 21.56471989 0.905117818 1.104216111 0.505938608 0.077708857 88.52886479 78193.38059 0.019433866 0.040518542 5.18E-06 5.285854529 0.199098293 SLS(ph)DSESDDSKSK ddPTM_A459_MK2206_30min_R1 3 SLSDSESDDSKSK 13 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 SLS(0.983)DS(0.017)ESDDSKSK;SLS(0.661)DS(0.335)ES(0.004)DDSKSK;SLS(0.943)DS(0.056)ES(0.001)DDSKSK 239.38 4.60E-17 30670400 10192.2 11707.1 12368 13925.1 10170.7 7051.5 6735.9 14605.3 2967.29 2647.18 TRUE FALSE 9325.299869 10944.96566 11528.49462 14997.61361 9765.579482 7450.749836 6286.560401 14477.6074 3275.750414 2975.132644 3.134414826 3.678816031 3.874951473 5.040989902 3.282401376 2.504342068 2.113035335 4.866205691 1.101043485 1 11.53873828 -6.564855302 4.697547067 2.560658018 3.939724284 0.314841674 1.097356922 0.278760569 13.99144774 0.357477972 0.364203795 2.72E-07 6.564855302 1.379066266 SLS(ph)DSESDDSKSK ddPTM_A459_MK2206_30min_R2 1 SLSDSESDDSKSK 13 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 SLS(0.999)DSESDDSKSK 225.86 1.85E-09 6096600 23115 78217 57809 56564 113790 60569 72723 37813 106150 48402 TRUE FALSE 24884.70217 74332.85752 59736.32321 51942.54026 109322.0329 62873.99574 63174.38274 42755.28893 115382.7351 46822.6467 0.531467226 1.587540704 1.275799798 1.109346522 2.334811049 1.342811656 1.349227077 0.913132681 2.464250598 1 15.51491887 -4.757589871 24.88907018 1.482996564 0.531465783 0.24878207 0.497744766 151.3615915 978483.598 0.118182493 0.866934315 1.75E-05 4.757589871 -0.951530782 SLS(ph)ELESLK ddPTM_A459_MK2206_30min_R2 2 SLSELESLK 9 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 S(0.001)LS(0.999)ELESLK;S(0.018)LS(0.982)ELESLK 104.79 0.013024 1010700 20449.3 15881.4 17485.5 16860.8 14907.2 14997.8 19403.7 15942.5 15880.9 18064.6 TRUE FALSE 22014.91413 15092.75277 18068.45784 15483.2187 14321.86843 15568.55179 16855.97088 18026.23949 17262.19198 17475.15358 1.259783728 0.863669249 1.033951305 0.886013312 0.819556083 0.890896421 0.964567825 1.031535397 0.987813463 1 14.09301751 -4.753062962 24.97998213 0.939391545 1.25978433 0.647807647 0.070270477 209.126319 623603.8602 0.018643684 0.208017341 1.77E-05 4.753062962 0.320392785 SLS(ph)EQPVMDTATATEQAK ddPTM_A459_MK2206_30min_R2 3 SLSEQPVMDTATATEQAK 18 0 P18615;P18615-3;A0A0A0MT02;P18615-4;A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 NELFE Negative elongation factor E 1 S(0.02)LS(0.964)EQPVMDT(0.015)AT(0.001)ATEQAK;S(0.165)LS(0.83)EQPVMDT(0.005)ATATEQAK;S(0.166)LS(0.834)EQPVMDTATATEQAK 135.09 0.00082196 11060000 102806.7 114454.1 111852 125797 115162 96391 127157 99745.9 87811 136533 TRUE FALSE 110677.66 108770.4758 115581.0899 115518.9827 110640.1612 100059.227 110461.1332 112783.0316 95448.64205 132077.9394 0.83797234 0.823532502 0.875097616 0.874627385 0.837688427 0.757577136 0.836332954 0.853912713 0.722669073 1 17.01102999 -4.311397903 15.48795963 0.83650166 3.610462514 0 0.070238625 5565.207885 407371.3836 0.01593333 277.8013137 4.88E-05 4.311397903 2.773960855 SLS(ph)ESAATR ddPTM_A459_MK2206_30min_R1 2 SLSESAATR 9 0 O14924-5;O14924-4;O14924;E9PBG5 O14924-5 RGS12 Regulator of G-protein signaling 12 1 S(0.014)LS(0.979)ES(0.007)AATR;SLS(0.854)ES(0.145)AATR 121.29 0.0063098 27065000 6276.5 5874.3 6857.2 4980.6 6901.8 5190.3 5626.5 5115.2 4056.5 4045.4 TRUE FALSE 5742.650716 5491.882002 6391.752369 5364.206675 6626.886691 5484.170301 5251.166451 5070.478346 4478.187691 4546.574693 1.263071895 1.207916371 1.405839077 1.179834719 1.457555883 1.206220214 1.154971997 1.115230407 0.984958566 1 12.15056434 -7.656080673 1.277301633 0.996993142 1.295436099 0.668035914 0.083212715 0.274560209 0.830159204 0.064235591 0.026847483 2.21E-08 7.656080673 0.298442958 SLS(ph)ESAATR ddPTM_A459_MK2206_30min_R2 2 SLSESAATR 9 0 O14924-5;O14924-4;O14924;E9PBG5 O14924-5 RGS12 Regulator of G-protein signaling 12 1 S(0.001)LS(0.998)ES(0.001)AATR;SLS(0.999)ES(0.001)AATR 138.25 0.0024831 30843000 55695 65391 58275 79152 57881 70347 59961 41901 42890 48645 TRUE FALSE 59959.05202 62143.77803 60217.85941 72685.02841 55608.30111 73024.10438 52088.04867 47377.60457 46620.49467 47057.71763 1.274159799 1.320586317 1.279659585 1.544593152 1.181704169 1.551798686 1.106897047 1.006797757 0.990708794 1 15.52214373 -7.459635528 5.909492222 1.008755694 1.353583854 0.697098285 0.109025907 0.118292863 8.256247979 0.044448257 0.029230254 3.47E-08 7.459635528 0.34482816 SLS(ph)ESSVIMDR ddPTM_A459_MK2206_30min_R1 3 SLSESSVIMDR 11 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BNX5 H3BSS6 ZNF106 Zinc finger protein 106 1 S(0.121)LS(0.857)ES(0.016)S(0.006)VIMDR;S(0.004)LS(0.731)ES(0.133)S(0.133)VIMDR;S(0.031)LS(0.955)ES(0.007)S(0.007)VIMDR 154.67 0.00053883 62429000 6021.2 5617.4 5875.1 5413.5 6613.3 5101 5899.9 5887.8 5010.03 5082 TRUE FALSE 5509.065321 5251.706239 5476.314581 5830.448708 6349.878257 5389.814212 5506.328436 5836.323585 5530.840547 5711.596527 0.964540351 0.919481307 0.958806273 1.020808924 1.111751894 0.943661582 0.964061171 1.021837512 0.96835281 1 12.47967835 -5.625968982 5.023542658 1.005317161 0.941417531 0.258724048 0.044486496 0.283536257 11.43697188 0.012837252 0.022763867 2.37E-06 5.625968982 -0.06389963 SLS(ph)ESSVIMDR ddPTM_A459_MK2206_30min_R2 7 SLSESSVIMDR 11 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BNX5 H3BSS6 ZNF106 Zinc finger protein 106 1 S(0.001)LS(0.991)ES(0.004)S(0.004)VIMDR;S(0.009)LS(0.955)ES(0.018)S(0.018)VIMDR;SLS(0.997)ES(0.001)S(0.001)VIMDR;SLS(0.998)ESS(0.001)VIMDR;S(0.104)LS(0.896)ESSVIMDR;SLS(1)ESSVIMDR;S(0.005)LS(0.972)ES(0.009)S(0.013)VIMDR 168.83 0.00045652 62073000 218769.8 285050.4 255719.2 275676 310643 295721 313407 256048.9 297649.7 308643 TRUE FALSE 235518.9841 270895.2116 264244.7505 253152.389 298445.595 306974.8699 272256.2844 289515.3704 323538.7329 298572.0042 0.788818043 0.907302787 0.885028559 0.84787718 0.999576621 1.028143515 0.911861396 0.969666835 1.083620461 1 18.18771937 -5.21021232 0.390778936 1.020900238 0.716756505 0.613982598 0.052939614 3.146280325 0.488596422 0.049444532 0.435414023 6.16E-06 5.21021232 -0.304143733 SLS(ph)FEMQQDELIEKPMSPMQYAR ddPTM_A459_MK2206_30min_R1 3 SLSFEMQQDELIEKPMSPMQYAR 23 1 Q9Y6Y0 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein 1 S(0.059)LS(0.939)FEMQQDELIEKPMS(0.002)PMQYAR;S(0.034)LS(0.966)FEMQQDELIEKPMSPMQYAR;S(0.025)LS(0.975)FEMQQDELIEKPMSPMQYAR 111.55 7.93E-06 65947300 5092.9 4720.2 4923.01 5207.6 4609.6 5300.3 4184.12 4701.8 4262.4 3837.9 TRUE FALSE 4659.722111 4412.914122 4588.849797 5608.690254 4425.989871 5600.398406 3905.004989 4660.692658 4705.491733 4313.368027 1.080297828 1.023078507 1.063866976 1.300304129 1.026109955 1.298381768 0.905326178 1.080522837 1.090908938 1 12.0745991 -7.280786542 24.99777176 1.02589975 1.126794435 0.216999667 0.104394765 1513.411948 1955417.096 0.043362766 0.02927924 5.24E-08 7.280786542 0.100894684 SLS(ph)FSEPQQPAPAMK ddPTM_A459_MK2206_30min_R1 1 SLSFSEPQQPAPAMK 15 0 Q9H8N7 Q9H8N7 ZNF395 Zinc finger protein 395 1 S(0.035)LS(0.963)FS(0.001)EPQQPAPAMK 114.31 0.0032343 0 1046.9 1250.5 1105.7 771.44 1201.7 1179.3 1263.7 1483.6 1173.3 1150.4 TRUE FALSE 957.8556575 1169.092223 1030.648165 830.8564425 1153.833744 1246.070947 1179.400879 1470.629042 1295.268734 1292.920237 0.740846674 0.904226099 0.797147523 0.642620031 0.892424537 0.963764748 0.912199256 1.137447616 1.001816428 1 10.33641756 -6.820175413 1.643394901 1.027342279 0.783014878 0.639240383 0.081293186 0.24694015 1.379436128 0.037147437 0.03227922 1.51E-07 6.820175413 -0.244327401 SLS(ph)FSEPQQPAPAMK ddPTM_A459_MK2206_30min_R2 2 SLSFSEPQQPAPAMK 15 0 Q9H8N7 Q9H8N7 ZNF395 Zinc finger protein 395 1 S(0.001)LS(0.544)FS(0.455)EPQQPAPAMK;S(0.004)LS(0.993)FS(0.003)EPQQPAPAMK 192.4 2.99E-05 6547400 30356 44704 41183 47636 42860 52072 72966 57922 57958 74021 TRUE FALSE 32680.0787 42484.06437 42556.02067 43743.98642 41177.10105 54053.63645 63385.47655 65492.60428 62999.08208 71605.70083 0.456389342 0.593305615 0.594310511 0.610900891 0.575053391 0.754878953 0.885201539 0.914628354 0.879805397 1 16.12778683 -7.016341593 1.531919407 0.928874525 0.561988788 0.921382929 0.048900262 0.103352447 0.490157748 0.024533369 0.018018541 9.63E-08 7.016341593 -0.366885736 SLS(ph)GSPLK ddPTM_A459_MK2206_30min_R1 2 SLSGSPLK 8 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 S(0.091)LS(0.574)GS(0.335)PLK;S(0.023)LS(0.779)GS(0.199)PLK 117.31 0.008922 164700000 14348.4 14910.5 14577.8 11698 11154.8 11693.9 10515.5 11325.4 11590.1 7892.8 TRUE FALSE 13127.99323 13939.82374 13588.29955 12598.98199 10710.4807 12355.99851 9814.030182 11226.38322 12794.93237 8870.619652 1.479940945 1.571459975 1.531832057 1.42030461 1.207410656 1.392912671 1.106352269 1.265569223 1.442394429 1 13.11481917 -6.047197193 2.826893485 1.24981779 1.532032249 0.541573234 0.121678752 0.211709544 3.365924231 0.036172147 0.052154065 8.97E-07 6.047197193 0.282214459 SLS(ph)GSSPCPK ddPTM_A459_MK2206_30min_R1 2 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.006)LS(0.923)GS(0.069)S(0.003)PCPK;S(0.005)LS(0.495)GS(0.495)S(0.005)PCPK 172.61 0.00013901 24578000 9659.4 9386.1 10127.1 8850.8 10289.6 9239.4 9474.1 9740.8 8319 8362.2 TRUE FALSE 8837.817306 8775.063184 9439.700668 9532.49015 9879.743443 9762.526843 8842.100075 9655.637213 9183.78982 9398.172467 0.940376157 0.933698888 1.004418753 1.014291894 1.051240917 1.038768641 0.940831859 1.027395193 0.9771889 1 13.19816453 -5.27574234 6.828205218 1.008509568 0.936798448 0.468503136 0.029667122 0.121929334 31.11584593 0.007986056 0.018014637 5.30E-06 5.27574234 -0.07171112 SLS(ph)GSSPCPK ddPTM_A459_MK2206_30min_R2 2 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.001)LS(0.997)GS(0.002)SPCPK;SLS(0.767)GS(0.231)S(0.002)PCPK 156.51 0.00050759 11449100 31086 36834 33245 33848 36374 34033 36770 28565 24934 40972 TRUE FALSE 33465.96806 35004.87712 34353.37171 31082.51013 34945.774 35328.14966 31942.05483 32298.54358 27102.71425 39635.087 0.844352078 0.883179016 0.866741423 0.784217028 0.881687834 0.891335237 0.805903487 0.814897759 0.6838061 1 15.27449052 -7.28803291 23.24782437 0.81072663 0.857743783 0.025482632 0.077452583 878.9407201 768355.717 0.030828857 0.02079545 5.15E-08 7.28803291 0.047017153 SLS(ph)IEIGHEVK ddPTM_A459_MK2206_30min_R1 1 SLSIEIGHEVK 11 0 A0A3B3IU16;C9JTT8;Q68DU7;H7C1N3;O15155-2;O15155 A0A3B3IU16 BET1;DKFZp781C0425 BET1 homolog 1 S(0.173)LS(0.827)IEIGHEVK 75.764 0.034832 6315400 9321.1 5994.3 4830.2 4143.9 5385.7 4442.7 5867.1 5166 7235.2 5980.1 TRUE FALSE 8528.291498 5604.06998 4502.339482 4463.063896 5171.176165 4694.241835 5475.716464 5120.834207 7987.324931 6720.959935 1.268909736 0.833819876 0.669895301 0.664051555 0.769410354 0.69844812 0.814722378 0.761920061 1.188420257 1 12.71445159 -8.254343673 24.86700851 1.094210137 0.796462651 0.307210303 0.16963791 546.6521173 1915768.585 0.122530738 0.044087258 5.57E-09 8.254343673 -0.297747486 SLS(ph)IEIGHEVK ddPTM_A459_MK2206_30min_R2 1 SLSIEIGHEVK 11 0 A0A3B3IU16;C9JTT8;Q68DU7;H7C1N3;O15155-2;O15155 A0A3B3IU16 BET1;DKFZp781C0425 BET1 homolog 1 S(0.417)LS(0.583)IEIGHEVK 76.311 0.034145 3235000 58522 28674 28921 22376 21365 20059 42350 23443 24200 27940 TRUE FALSE 63002.48932 27250.09086 29885.21171 20547.80922 20526.10275 20822.3593 36789.39413 26507.08059 26304.87226 27028.32009 2.330980583 1.008205126 1.105699933 0.760232569 0.759429468 0.770390436 1.361142461 0.980715061 0.973233711 1 14.72218423 -4.76050967 5.910620275 0.962095864 2.385044619 0.847688822 0.173312174 0.053365068 6.919089357 0.046196376 0.308213317 1.74E-05 4.76050967 1.422948755 up SLS(ph)KSDSDLLTCSPTEDATMGSR ddPTM_A459_MK2206_30min_R2 2 SLSKSDSDLLTCSPTEDATMGSR 23 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.04)LS(0.553)KS(0.351)DS(0.056)DLLTCSPTEDATMGSR;S(0.029)LS(0.396)KS(0.267)DS(0.307)DLLTCSPTEDATMGSR 106.36 1.12E-05 19318200 44660 69490 61250 73857 61401 53314 82461 70472 61424 66040 TRUE FALSE 48079.20394 66039.22765 63292.04443 67822.64684 58990.08822 55342.90163 71633.77165 79682.93237 66766.54849 63885.12021 0.752588455 1.033718453 0.990716527 1.061634487 0.923377588 0.866287822 1.121290395 1.24728469 1.045103277 1 15.96319232 -7.28188967 23.02306033 1.124026735 0.949746241 0.376325703 0.102270349 309.2437857 348145.6691 0.042461755 0.028681321 5.23E-08 7.28188967 -0.174280494 SLS(ph)LDPGQSLEPHPEGPQR ddPTM_A459_MK2206_30min_R2 2 SLSLDPGQSLEPHPEGPQR 19 0 P98174 P98174 FGD1 "FYVE, RhoGEF and PH domain-containing protein 1" 1 S(0.126)LS(0.873)LDPGQSLEPHPEGPQR;S(0.196)LS(0.803)LDPGQS(0.001)LEPHPEGPQR 142.22 6.14E-05 16151300 42666 78563 51081 73145 66113 75531 71242 48756 62644 48914 TRUE FALSE 45932.54176 74661.67566 52784.01505 67168.81952 63517.07143 78405.38513 61887.83982 55128.5766 68092.66189 47317.94019 0.970721498 1.577872481 1.115518022 1.419521206 1.342346501 1.656990664 1.307914917 1.165067127 1.439045352 1 15.53009965 -10.84551619 3.619042871 0.99879732 1.340300712 0.202035277 0.197897739 136379319.5 178970455.7 1701563.216 0.046844481 1.43E-11 10.84551619 0.341503392 SLS(ph)LESTDR ddPTM_A459_MK2206_30min_R1 2 SLSLESTDR 9 0 H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-2;Q5VT25-6 H0Y7V8 CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha 1 S(0.001)LS(0.969)LES(0.023)T(0.007)DR;SLS(0.986)LES(0.009)T(0.004)DR 126.03 0.0049031 12234000 5081.8 4625.8 5216.1 4004.1 5439 4220.2 5612.7 4605.8 5522 5616.6 TRUE FALSE 4649.566224 4324.659579 4862.045665 4312.496476 5222.353113 4459.144077 5238.287024 4565.531976 6096.031661 6312.426811 0.736573486 0.68510253 0.770233986 0.683175679 0.827313055 0.706407252 0.829837269 0.723260976 0.965719183 1 12.62397904 -8.303038777 5.212430175 0.992091434 0.746043165 0.786550078 0.0495408 0.085998436 5.759026624 0.043345803 0.011834577 4.98E-09 8.303038777 -0.246048269 SLS(ph)LESTDR ddPTM_A459_MK2206_30min_R2 1 SLSLESTDR 9 0 H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-2;Q5VT25-6 H0Y7V8 CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha 1 S(0.001)LS(0.716)LES(0.282)T(0.002)DR 131.82 0.0035118 12032000 36514 38110 36803 37547 29839 33694 43521 33230 36224 36805 TRUE FALSE 39309.53991 36217.51282 38029.99365 34479.28999 28667.37093 34976.24878 37806.64042 37573.2751 39374.69804 35604.05586 1.104074774 1.017229974 1.068136557 0.968409052 0.805171496 0.982366978 1.061863305 1.055308846 1.105904849 1 15.11975398 -9.742848042 11.36530157 0.999997816 1.013643668 0.001188629 0.083796429 0 0 0.088773499 0.021530736 1.81E-10 9.742848042 0.013645852 SLS(ph)LGDK ddPTM_A459_MK2206_30min_R2 1 SLSLGDK 7 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.03)LS(0.97)LGDK 85.862 0.035661 33435000 128800 93453 118270 116160 93511 87886 137150 117290 65811 139060 TRUE FALSE 138661.027 88812.25991 122213.0628 106669.3564 89839.28828 91230.56331 119142.0403 132620.2057 71535.12182 134522.4836 1.030764697 0.660203838 0.908495439 0.792948164 0.66783846 0.678180783 0.885666374 0.985859034 0.531770749 1 17.03748779 -10.33151054 15.1738392 1 0.794246315 0.14275305 0.15178258 0 0 0.140535185 0.034084789 4.66E-11 10.33151054 -0.205753685 SLS(ph)LGDKEISR ddPTM_A459_MK2206_30min_R2 2 SLSLGDKEISR 11 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.012)LS(0.983)LGDKEIS(0.005)R;SLS(0.993)LGDKEIS(0.007)R 70.563 0.036246 51904000 173368 227150 242340 254370 263300 189423 294480 223210 232074 251450 TRUE FALSE 186641.1874 215870.0613 250419.4946 233587.1573 252961.519 196631.625 255814.4223 252384.3134 252259.377 243245.2071 0.767296464 0.887458643 1.029494055 0.960295005 1.039944515 0.808367932 1.051673023 1.037571578 1.037057955 1 17.89205185 -4.94039133 2.730857042 0.99239202 0.75761881 0.525862749 0.068350458 0.266615682 3.413759981 0.018066788 0.121535317 1.15E-05 4.94039133 -0.234773209 SLS(ph)MDSQVPVYSPSIDLK ddPTM_A459_MK2206_30min_R1 1 SLSMDSQVPVYSPSIDLK 18 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 S(0.048)LS(0.856)MDS(0.095)QVPVYSPSIDLK 193.41 2.62E-10 11338000 3761.5 3860.1 4370.8 3695.4 3877.8 3527.2 3827 3504.2 3768.7 3685.1 TRUE FALSE 3441.564673 3608.806788 4074.122274 3980.020348 3723.339015 3726.907016 3571.707813 3473.563149 4160.469851 4141.638009 0.830967039 0.871347708 0.983698301 0.960977357 0.899001556 0.899863051 0.862390147 0.838693083 1.004546955 1 12.01598575 -8.282945773 24.18354299 1.002273557 0.897269763 0.469972512 0.046113375 613.8350001 690236.4464 0.048698945 0.012629813 5.21E-09 8.282945773 -0.105003794 SLS(ph)MDSQVPVYSPSIDLK ddPTM_A459_MK2206_30min_R2 2 SLSMDSQVPVYSPSIDLK 18 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 S(0.006)LS(0.993)MDS(0.001)QVPVYSPSIDLK;S(0.016)LS(0.984)MDSQVPVYSPSIDLK 187.75 1.07E-14 3599000 52478 61241 52243 62065 58961 47970 61223 46958 46563 66966 TRUE FALSE 56495.75603 58199.86099 53984.75555 56994.09096 56645.89488 49795.53196 53184.34656 53095.57183 50612.96557 64780.9049 0.872105077 0.898410744 0.833343647 0.879797697 0.874422717 0.768676079 0.820988015 0.819617631 0.781294513 1 15.983281 SLS(ph)MVDLQDAR ddPTM_A459_MK2206_30min_R1 2 SLSMVDLQDAR 11 0 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 S(0.002)LS(0.998)MVDLQDAR;S(0.33)LS(0.67)MVDLQDAR 154.23 0.00054657 16788100 4941.1 5424.7 5538.5 5418.6 6051.5 5803.1 6096.2 5547.9 4957.8 4760.4 TRUE FALSE 4520.833498 5071.551044 5162.562051 5835.941511 5810.455941 6131.666507 5689.533621 5499.395295 5473.181052 5350.154291 0.844991238 0.947926128 0.964937041 1.090798731 1.08603521 1.146072837 1.063433559 1.02789471 1.022994993 1 12.38536478 -5.231900736 1.448559179 1.067555958 0.847263969 0.705671391 0.044233719 0.330449512 1.075401005 0.01410021 0.082421821 5.86E-06 5.231900736 -0.220291988 SLS(ph)NSNPDISGTPTSPDDEVR ddPTM_A459_MK2206_30min_R2 2 SLSNSNPDISGTPTSPDDEVR 21 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.342)LS(0.517)NS(0.141)NPDISGTPTSPDDEVR;S(0.001)LS(0.746)NS(0.225)NPDIS(0.023)GT(0.005)PTSPDDEVR 356.36 3.25E-196 98503000 81283 87152 84795 102425 87780 102402 102385 69721 85895 76787 TRUE FALSE 87506.08898 82824.15841 87622.02298 94056.54986 84333.31614 106298.9799 88941.72651 78833.77409 93365.99184 74281.44648 1.178034262 1.115004652 1.179595002 1.266218609 1.135321404 1.43103002 1.197361262 1.061284854 1.256922102 1 16.18071429 -10.53132268 7.660438412 0.999999995 1.201415656 0.284735534 0.096184389 8.57E-09 1.10E-09 0.094608391 0.022945905 2.94E-11 10.53132268 0.201415661 SLS(ph)PDEER ddPTM_A459_MK2206_30min_R1 1 SLSPDEER 8 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.003)LS(0.997)PDEER 104.22 0.014781 10308000 3494.1 3204.1 2925.1 2777.3 3305 2893.1 3205.6 2297 2605.5 2683.1 TRUE FALSE 3196.908447 2995.512508 2726.552362 2991.208127 3173.354852 3056.904822 2991.760273 2276.917571 2876.351049 3015.502684 1.060157719 0.993370864 0.90417839 0.991943447 1.052346883 1.013729763 0.992126549 0.75507065 0.953854581 1 11.5581828 -7.568303996 24.99999651 0.88739704 0.999786779 0.279249283 0.07102927 144.3035078 79416.53927 0.032554261 0.018795221 2.70E-08 7.568303996 0.112389739 SLS(ph)PGAASSSSGDGDGK ddPTM_A459_MK2206_30min_R2 2 SLSPGAASSSSGDGDGK 17 0 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 S(0.01)LS(0.982)PGAAS(0.007)SSSGDGDGK;SLS(0.997)PGAAS(0.003)SSSGDGDGK 214.54 8.66E-10 11737700 62953 48893 51363 57390 52926 37297 61332 50600 35398 56193 TRUE FALSE 67772.73008 46465.04472 53075.41678 52701.05342 50847.85931 38716.36347 53279.03473 57213.59374 38476.85406 54359.42701 1.246752106 0.854774365 0.976379254 0.969492438 0.935400943 0.712229058 0.980125024 1.05250546 0.707823025 1 15.73024263 -4.755406737 24.99296365 0.912260021 1.246752653 0.449557622 0.11180634 185.2737078 767505.4805 0.027111868 0.241817196 1.76E-05 4.755406737 0.334492632 SLS(ph)PGAASSSSGDGDGKEGLEEPK ddPTM_A459_MK2206_30min_R1 3 SLSPGAASSSSGDGDGKEGLEEPK 24 1 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 S(0.028)LS(0.953)PGAAS(0.005)S(0.005)S(0.001)S(0.008)GDGDGKEGLEEPK;S(0.041)LS(0.95)PGAAS(0.006)S(0.001)S(0.001)S(0.001)GDGDGKEGLEEPK;S(0.203)LS(0.66)PGAAS(0.109)S(0.016)S(0.005)S(0.008)GDGDGKEGLEEPK 123.35 8.19E-08 38968000 8353.8 9594.3 10235.5 8025.9 5803 5620.5 7456.5 7070.3 10203.5 9763.3 TRUE FALSE 7643.265442 8969.709326 9540.742778 8644.056209 5571.854222 5938.727853 6959.09049 7008.485113 11264.19034 10972.85131 0.69656147 0.817445627 0.869486199 0.787767551 0.507785448 0.541220115 0.63420986 0.63871139 1.026550895 1 13.42165084 -8.265301077 24.93910026 1.013275506 0.687915923 0.588363132 0.109277337 272.2478738 1758155.452 0.108171408 0.032046728 5.43E-09 8.265301077 -0.325359583 SLS(ph)PGAASSSSGDGDGKEGLEEPK ddPTM_A459_MK2206_30min_R2 3 SLSPGAASSSSGDGDGKEGLEEPK 24 1 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 S(0.055)LS(0.796)PGAAS(0.01)S(0.01)S(0.028)S(0.101)GDGDGKEGLEEPK;S(0.171)LS(0.828)PGAAS(0.001)SSSGDGDGKEGLEEPK;S(0.072)LS(0.765)PGAAS(0.088)S(0.021)S(0.021)S(0.033)GDGDGKEGLEEPK 127.16 7.42E-08 67474400 168167 156836 173556 153161 156596 110426 201211 138537 122440 187858 TRUE FALSE 181041.9948 149047.7523 179342.2704 140647.2564 150447.2542 114628.3388 174791.754 156644.2616 133089.6099 181728.2088 0.996223954 0.820168499 0.986870842 0.773942897 0.827869571 0.630768 0.96183061 0.861969986 0.732355261 1 17.47142285 -1.522894911 0.796540509 0.82761678 38.46667263 0.130227348 0.111713759 983.5898201 3.476024432 0.03909332 66780.30162 0.029998883 1.522894911 37.63905585 SLS(ph)PGVSR ddPTM_A459_MK2206_30min_R1 3 SLSPGVSR 8 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.13)LS(0.87)PGVSR;S(0.048)LS(0.952)PGVSR;S(0.047)LS(0.953)PGVSR 117.71 0.0087284 89915000 23805.9 19787.5 19296.9 15123.8 25887.2 23488.5 28903.8 20073.8 18121.1 20317.6 TRUE FALSE 21781.0832 18499.33015 17987.08019 16288.6377 24856.05801 24818.39857 26975.68024 19898.29688 20004.85319 22834.69768 0.953859057 0.810141234 0.787708269 0.713328371 1.08852144 1.086872221 1.181346065 0.871406189 0.87607261 1 14.47894007 -6.267241204 24.99610602 1.022614005 0.813782877 0.470737943 0.104366644 451.9799247 1947269.493 0.034904818 0.04064136 5.40E-07 6.267241204 -0.208831128 SLS(ph)PGVSR ddPTM_A459_MK2206_30min_R2 2 SLSPGVSR 8 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.226)LS(0.774)PGVSR;S(0.05)LS(0.95)PGVSR 97.597 0.020141 30906000 386970 458320 374140 567630 454370 502340 433250 377350 436150 412550 TRUE FALSE 416596.7207 435560.4953 386613.6409 521252.8132 436529.1508 521456.9007 376363.7546 426670.9406 474085.5386 399088.5273 1.04387045 1.091388164 0.968741556 1.306108238 1.093815334 1.306619622 0.943058316 1.069113521 1.18792074 1 18.60634928 -10.69643951 14.57507526 1 1.112080958 0.076179874 0.117311161 0 0 0.11152288 0.027048272 2.01E-11 10.69643951 0.112080958 SLS(ph)PIIGK ddPTM_A459_MK2206_30min_R1 1 SLSPIIGK 8 0 Q9H4G0-3;Q9H4G0-2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(0.012)LS(0.988)PIIGK 120.99 0.0071153 513160000 12350 13483 12361 10109 12595 11131 13035 12521 11222 10967 TRUE FALSE 11299.56765 12605.25425 11521.96976 10887.59693 12093.31448 11761.2276 12165.45893 12411.53022 12388.56706 12325.67476 0.916750431 1.022682693 0.934794239 0.883326645 0.981148271 0.954205578 0.987001456 1.006965579 1.005102544 1 13.58937901 -7.305099762 1.599007719 1.005694013 0.947451928 0.352420661 0.034629007 0.482786999 2.401791543 0.020762747 0.012089408 4.95E-08 7.305099762 -0.058242085 SLS(ph)PILPGR ddPTM_A459_MK2206_30min_R1 1 SLSPILPGR 9 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 S(0.169)LS(0.831)PILPGR 83.869 0.037713 65581000 3691.4 5375.3 4533.9 8074.9 3020.6 2900.4 3233.7 3568.2 4654.5 4210.9 TRUE FALSE 3377.427046 5025.366993 4226.1515 8696.830197 2900.283106 3064.618142 3017.985773 3537.003604 5138.351931 4732.578083 0.713654796 1.061866683 0.892991394 1.837651708 0.612833651 0.647557861 0.63770438 0.747373533 1.08574055 1 12.20841059 SLS(ph)PILPGR ddPTM_A459_MK2206_30min_R2 3 SLSPILPGR 9 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 S(0.011)LS(0.989)PILPGR;S(0.094)LS(0.906)PILPGR;S(0.189)LS(0.811)PILPGR 102.06 0.016467 112242000 67844 86309 84264 89333 82166 77156 82555 69061 80199 72285 TRUE FALSE 73038.1888 82023.02057 87073.3197 82034.20814 78939.74999 80092.22565 71715.42933 78087.50982 87174.56405 69926.34637 1.044501716 1.172991652 1.245214776 1.173151643 1.128898535 1.145379815 1.025585249 1.116710852 1.246662647 1 16.09354851 -6.67521087 2.274281631 1.107157476 1.164394918 0.09130007 0.077514336 0.78099596 8.266277144 0.02979204 0.029043738 2.11E-07 6.67521087 0.057237443 SLS(ph)PLGGR ddPTM_A459_MK2206_30min_R2 1 SLSPLGGR 8 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 S(0.433)LS(0.567)PLGGR 84.817 0.039366 0 14461 7463.3 11434 11398 9016.7 9023.9 12084 9243.7 9403.9 11289 TRUE FALSE 15568.14528 7092.683375 11815.20385 10466.74694 8662.659053 9367.310838 10497.35628 10451.88333 10221.83422 10920.64085 1.425570668 0.649475014 1.081914881 0.958437062 0.793237244 0.857762009 0.961239951 0.957076006 0.936010474 1 13.4147699 -4.741751024 24.95747263 0.912347678 1.425572468 0.647769502 0.113921125 851.8203039 1079732.715 0.027240367 1.054394302 1.81E-05 4.741751024 0.51322479 SLS(ph)PLIK ddPTM_A459_MK2206_30min_R1 1 SLSPLIK 7 0 Q7Z4H7;Q5VY60;Q7Z4H7-3 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 S(0.407)LS(0.593)PLIK 98.582 0.021764 42673000 11495 11998 12287 11893 12048 11222 11779 12462 12403 11497 TRUE FALSE 10517.28989 11216.92802 11452.99267 12809.00092 11568.10265 11857.37994 10993.2444 12353.04605 13692.33623 12921.33516 0.813947611 0.868093574 0.886362944 0.991306298 0.895271464 0.917659034 0.85078239 0.95601932 1.05966884 1 13.65746753 -1.522878745 0.139601894 1.033161622 0.349276665 0.481328948 0.052240851 76.56927589 0.71513472 0.244632551 10.43856869 0.03 1.522878745 -0.683884957 SLS(ph)PLIK ddPTM_A459_MK2206_30min_R2 1 SLSPLIK 7 0 Q7Z4H7;Q5VY60;Q7Z4H7-3 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 S(0.024)LS(0.976)PLIK 98.582 0.021764 30438000 305760 344130 298420 296150 372490 283160 380640 303470 281900 358330 TRUE FALSE 329169.2207 327041.0046 308369.1739 271953.5977 357864.171 293935.8522 330661.5108 343134.571 306419.1524 346637.7214 0.949605886 0.943466289 0.889600741 0.784547038 1.032386693 0.847962683 0.953910929 0.989893914 0.88397521 1 18.40306913 -7.473162924 24.95670069 0.956541351 0.908107584 0.111686696 0.067758142 852.6363708 428013.1049 0.027827793 0.018761129 3.36E-08 7.473162924 -0.048433767 SLS(ph)PNHNTLQTLK ddPTM_A459_MK2206_30min_R2 2 SLSPNHNTLQTLK 13 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 S(0.049)LS(0.951)PNHNTLQTLK;S(0.001)LS(0.999)PNHNTLQTLK 145.7 0.00062013 41278000 73406 130669 100625 165796 158799 167384 167781 111461 133389 106575 TRUE FALSE 79026.0198 124180.1675 103979.7873 152249.9364 152563.7534 173753.9154 145751.1532 126029.3354 144990.9341 103097.4665 0.766517573 1.204492911 1.008558123 1.476757302 1.479801188 1.685336423 1.413721968 1.222429025 1.406348178 1 16.65364935 -5.756090638 24.94174389 1.410602964 1.014319749 0.447924127 0.196540153 114.2011021 532523.894 0.053314573 0.08898855 1.75E-06 5.756090638 -0.396283215 SLS(ph)PPQSQSK ddPTM_A459_MK2206_30min_R1 1 SLSPPQSQSK 10 0 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 S(0.007)LS(0.992)PPQS(0.001)QSK 97.779 0.020266 18628000 2191.9 2382.4 2516.5 2218.9 2490.4 2226.6 2420.1 2497.9 2014.9 1965.7 TRUE FALSE 2005.467395 2227.305327 2345.686991 2389.800062 2391.202094 2352.668168 2258.659545 2476.061124 2224.356065 2209.225756 0.907769335 1.008183668 1.061768805 1.081736466 1.082371092 1.064928816 1.022376069 1.1207823 1.006848693 1 11.10932514 -4.807901327 2.181884281 1.06052791 0.872503881 0.610821595 0.035552551 0.365885566 2.122168776 0.008831964 0.133485296 1.56E-05 4.807901327 -0.188024029 SLS(ph)PQDEQCAVEEALDWR ddPTM_A459_MK2206_30min_R1 1 SLSPQDEQCAVEEALDWR 18 0 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 S(0.1)LS(0.9)PQDEQCAVEEALDWR 160.43 1.30E-05 1221100 490.97 420.3 240.34 329.89 282.62 128.99 380.69 125.62 190.59 149.09 TRUE FALSE 449.2104233 392.9383936 224.0263904 355.298185 271.3626469 136.2933023 355.2948647 124.5217176 210.4025125 167.5603948 2.680886637 2.345055311 1.336988915 2.120418643 1.619491571 0.813398074 2.120398828 0.743145287 1.255681647 1 7.388537378 -1.522878745 0.295148582 1.055888508 14.71628339 0.566743392 0.424846709 39.14176689 0.556813149 0.430869941 280.7325009 0.03 1.522878745 13.66039488 SLS(ph)PQDR ddPTM_A459_MK2206_30min_R2 1 SLSPQDR 7 0 E9PKP7;P17480-2;P17480 E9PKP7 UBTF Nucleolar transcription factor 1 1 S(0.009)LS(0.991)PQDR 85.862 0.035661 20261000 92701 136010 104220 124270 103180 135030 123680 102870 104290 101190 TRUE FALSE 99798.25983 129255.9412 107694.6428 114116.7435 99128.63476 140168.6613 107440.6674 116315.4622 113360.9557 97888.17859 1.01951289 1.320444849 1.10018027 1.165786769 1.012672175 1.43192634 1.097585725 1.188248304 1.158065839 1 16.57884702 -8.594042788 15.09323159 0.999999998 1.171374526 0.142224537 0.122142113 546.5959548 115930.9428 0.110535451 0.028540083 2.55E-09 8.594042788 0.171374528 SLS(ph)PQEDALTGSR ddPTM_A459_MK2206_30min_R2 4 SLSPQEDALTGSR 13 0 Q96EN8 Q96EN8 MOCOS Molybdenum cofactor sulfurase 1 S(0.056)LS(0.944)PQEDALTGSR;S(0.031)LS(0.968)PQEDALT(0.002)GSR;S(0.003)LS(0.997)PQEDALTGSR;SLS(1)PQEDALTGSR 187.08 0.00013811 46567400 114637 120946 101406 119942 101192 109757 113606 95703 100815 110629 TRUE FALSE 123413.6969 114939.9975 104786.8254 110142.3549 97218.69363 113933.8795 98689.39573 108211.7107 109583.7065 107019.1848 1.153192272 1.074013017 0.979140568 1.029183273 0.908423044 1.064611731 0.92216546 1.011143104 1.023963196 1 16.70750992 -4.952842089 2.157093342 0.990483283 1.169426233 0.563045881 0.045221103 0.311057786 2.190155243 0.011401539 0.094991693 1.11E-05 4.952842089 0.178942949 SLS(ph)PQLLQQMPSKPEGAAK ddPTM_A459_MK2206_30min_R1 2 SLSPQLLQQMPSKPEGAAK 19 1 Q9UPX8;Q9UPX8-3;A0A2R8Y2H5;A0A087X158 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.228)LS(0.771)PQLLQQMPS(0.001)KPEGAAK;S(0.171)LS(0.829)PQLLQQMPS(0.001)KPEGAAK 88.555 0.0017096 81644000 4567.3 5007.1 5856.7 5149.7 5606.2 4813.7 6237 5474.8 4821.6 4844.3 TRUE FALSE 4178.827151 4681.13688 5459.163522 5546.330786 5382.893183 5086.247534 5820.94111 5426.934401 5322.822574 5444.448457 0.767539115 0.859800018 1.002702765 1.018713067 0.988693938 0.934208042 1.069151661 0.996783135 0.977660569 1 12.41057019 -5.066560386 2.558942065 0.999669685 0.767641745 0.847423657 0.032445643 0.114405381 1.340190956 0.008863548 0.043310388 8.58E-06 5.066560386 -0.23202794 SLS(ph)PQLLQQMPSKPEGAAK ddPTM_A459_MK2206_30min_R2 2 SLSPQLLQQMPSKPEGAAK 19 1 Q9UPX8;Q9UPX8-3;A0A2R8Y2H5;A0A087X158 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.214)LS(0.786)PQLLQQMPSKPEGAAK;S(0.117)LS(0.883)PQLLQQMPSKPEGAAK 125.77 0.00021022 82980000 142891 182998 170649 186245 182822 141494 194205 151143 166956 165145 TRUE FALSE 153830.8448 173910.5854 176338.3525 171028.1877 175643.4897 146878.6533 168705.6502 170897.9091 181477.5311 159756.3322 0.962909218 1.088599012 1.1037957 1.070556549 1.099446183 0.919391747 1.05601855 1.069741066 1.135964557 1 17.28551359 -7.743789543 4.763879667 1.077749622 1.045267483 0.027483847 0.064067462 0.71181895 40.57607573 0.034216268 0.017752446 1.80E-08 7.743789543 -0.032482139 SLS(ph)PSHLTEDR ddPTM_A459_MK2206_30min_R1 5 SLSPSHLTEDR 11 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.15)LS(0.731)PS(0.12)HLTEDR;S(0.066)LS(0.891)PS(0.002)HLT(0.041)EDR;SLS(1)PSHLTEDR;S(0.1)LS(0.839)PS(0.061)HLTEDR;S(0.028)LS(0.926)PS(0.046)HLTEDR 174.21 0.00014524 230486000 15836.7 11708.1 13537.9 11473.6 17981 16621.5 16942.8 14700.7 11382.1 11427.4 TRUE FALSE 14489.7055 10945.90056 12618.98507 12357.29866 17264.77869 17562.59497 15812.57673 14572.17333 12565.31003 12843.11258 1.128208245 0.852277864 0.982548816 0.962173194 1.344283061 1.367471853 1.231210629 1.134629416 0.97836953 1 13.64870727 -6.235128458 24.18288035 1.195060269 0.972175015 0.328420884 0.134493376 556.0414987 511067.9919 0.041436457 0.053472872 5.82E-07 6.235128458 -0.222885254 SLS(ph)PSHLTEDR ddPTM_A459_MK2206_30min_R2 2 SLSPSHLTEDR 11 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.101)LS(0.824)PS(0.075)HLTEDR;S(0.009)LS(0.984)PS(0.007)HLTEDR 113.53 0.004661 22701000 42269 65525 51654 72823 70440 74551 65395 45827 61011 54721 TRUE FALSE 45505.14714 62271.12378 53376.11858 66873.12795 67674.17167 77388.09055 56808.55795 51816.74625 66317.6265 52935.45825 0.859634518 1.176359398 1.008324483 1.263295533 1.278427993 1.461932948 1.073166453 0.978866491 1.252801594 1 15.6919468 -4.761085994 24.44996626 1.173235602 0.859634135 0.281864995 0.146240327 8.875681809 612942.8476 0.03804687 0.216234324 1.73E-05 4.761085994 -0.313601467 SLS(ph)PSSNSAFSR ddPTM_A459_MK2206_30min_R1 1 SLSPSSNSAFSR 12 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 S(0.008)LS(0.99)PS(0.001)S(0.002)NSAFSR 157.33 0.00044373 28965000 1805.5 2222.6 1985.7 1776.7 2196.7 2042.5 2162 2110.1 1757.1 1978.8 TRUE FALSE 1651.932744 2077.908336 1850.916216 1913.541742 2109.200787 2158.144585 2017.776925 2091.651618 1939.756833 2223.948683 0.742792654 0.934332861 0.832265704 0.860425313 0.948403533 0.970411144 0.907294732 0.940512537 0.872212946 1 11.11890778 -3.02151707 0.485635396 0.936678374 7.34E-21 0.494796274 0.051159509 21.69190152 1.000287169 0.029650557 16.7713414 0.000951662 3.02151707 -0.936678374 SLS(ph)PSSNSAFSR ddPTM_A459_MK2206_30min_R2 1 SLSPSSNSAFSR 12 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 S(0.31)LS(0.677)PS(0.006)S(0.006)NS(0.002)AFSR 141.34 0.00099971 29650000 31732 45398 39702 36847 36186 37547 40263 25921 29901 28735 TRUE FALSE 34161.42632 43143.60133 41025.64486 33836.48223 34765.15582 38975.8774 34976.41974 29308.9637 32501.73493 27797.3793 1.228944137 1.552074419 1.475881752 1.217254399 1.250663073 1.402142158 1.258263211 1.054378666 1.169237379 1 14.76266125 -7.676344874 0.52025191 0.996169546 1.409250228 0.555269551 0.110208804 0.65709983 0.398012613 0.114587627 0.078070699 2.11E-08 7.676344874 0.413080682 SLS(ph)PSVR ddPTM_A459_MK2206_30min_R2 1 SLSPSVR 7 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 S(0.013)LS(0.986)PS(0.001)VR 85.161 0.045854 0 15484 18084 18644 20521 20934 34771 22149 25339 30742 19375 TRUE FALSE 16669.46695 17185.97486 19265.58165 18844.36866 20112.02598 36094.23477 19240.80969 28650.8943 33415.88359 18742.79534 0.88937998 0.916937658 1.027892655 1.005419326 1.073053705 1.925765827 1.026570976 1.528635072 1.782865522 1 14.19404851 -6.546317033 24.93926385 1.463641184 0.971386929 0.431699081 0.271978317 207.2152019 220483.5459 0.085771065 0.085775349 2.84E-07 6.546317033 -0.492254255 SLS(ph)PVAAPPLR ddPTM_A459_MK2206_30min_R2 3 SLSPVAAPPLR 11 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 S(0.015)LS(0.985)PVAAPPLR;S(0.056)LS(0.944)PVAAPPLR;S(0.001)LS(0.999)PVAAPPLR 115 0.0063029 22914700 128818 110320 111770 118628 95357 103042 118342 98205 89883 126576 TRUE FALSE 138680.4051 104841.6692 115496.356 108935.7129 91612.80505 106963.3355 102803.5532 111040.7307 97700.86087 122445.8355 1.132585723 0.856228951 0.94324446 0.889664499 0.748190452 0.873556337 0.839583909 0.906855919 0.797910852 1 16.90178418 SLS(ph)PVAAPPLREPR ddPTM_A459_MK2206_30min_R1 1 SLSPVAAPPLREPR 14 1 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 S(0.004)LS(0.996)PVAAPPLREPR 101.04 0.0047133 52407000 4731.9 4747.5 5342.5 5464.4 5450.8 4885.3 5548.1 4780.2 4623.2 4604.7 TRUE FALSE 4329.427057 4438.436887 4979.865985 5885.269035 5233.683094 5161.901464 5177.996372 4738.407215 5103.798184 5175.165 0.836577589 0.857641619 0.962262263 1.137213796 1.011307484 0.99743708 1.000547108 0.915605051 0.986209751 1 12.33738915 -5.315126073 3.805144793 1.005468089 0.84364453 0.597332049 0.051535498 0.157321124 4.662816575 0.014921593 0.036129611 4.84E-06 5.315126073 -0.161823559 SLS(ph)PVAAPPLREPR ddPTM_A459_MK2206_30min_R2 3 SLSPVAAPPLREPR 14 1 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 S(0.396)LS(0.604)PVAAPPLREPR;S(0.076)LS(0.924)PVAAPPLREPR;S(0.31)LS(0.69)PVAAPPLREPR 95.073 0.0070139 125020000 244800 307771 337224 418292 386331 373443 399947 320139 343834 375577 TRUE FALSE 263542.0762 292487.5397 348466.8798 384116.2056 371161.7038 387654.635 347433.4785 361982.2665 373740.0598 363321.9532 0.725367883 0.805036792 0.959113196 1.05723368 1.021577971 1.066972782 0.956268883 0.996312673 1.028674586 1 18.47088902 -5.222858022 2.26996542 1.01783807 0.730332415 0.916014704 0.030584405 0.087940186 0.833806032 0.008800238 0.033969837 5.99E-06 5.222858022 -0.287505655 SLS(ph)QGSTNSNMLDVQGGAHK ddPTM_A459_MK2206_30min_R2 1 SLSQGSTNSNMLDVQGGAHK 20 0 E9PCH4;Q8TEU7;A0A5F9ZHG7;B7Z7Y1;Q8TEU7-2 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 S(0.175)LS(0.705)QGS(0.059)T(0.059)NS(0.001)NMLDVQGGAHK 143 2.99E-05 5650000 12103 14513 13054 12579 10824 11069 15468 10935 12582 15903 TRUE FALSE 13029.61499 13792.30552 13489.21384 11551.25546 10398.99537 11490.23855 13437.03302 12364.24205 13676.35962 15384.08641 0.846954095 0.896530685 0.876829048 0.750857422 0.675957941 0.746891186 0.873437178 0.803703367 0.888993942 1 13.90915115 -8.630733962 1.416880565 1.000213217 0.804969332 0.451652653 0.065568359 0.592034579 2.507804549 0.071716783 0.021276507 2.34E-09 8.630733962 -0.195243884 SLS(ph)SLPK ddPTM_A459_MK2206_30min_R1 1 SLSSLPK 7 0 A6NM62 A6NM62 LRRC53 Leucine-rich repeat-containing protein 53 1 SLS(0.953)S(0.047)LPK 83.005 0.040101 13059000 10573 10710 10143 8636.1 10151 8035.3 9740.4 9161.6 9398 9262.1 TRUE FALSE 9673.710829 10012.77705 9454.52142 9301.253918 9746.664175 8490.251742 9090.635688 9081.501097 10374.95573 10409.55887 0.929310353 0.961882936 0.908253802 0.893530075 0.936318656 0.815620705 0.873296919 0.872419399 0.99667583 1 13.34562131 -8.271996351 23.69999191 0.998337977 0.898693388 0.518611349 0.038348325 341.4239347 766466.5931 0.038596829 0.01043685 5.35E-09 8.271996351 -0.099644589 SLS(ph)SPGGPSKPK ddPTM_A459_MK2206_30min_R1 1 SLSSPGGPSKPK 12 1 J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2;J3QR12;Q9BZE9-4;J3QL04 J3KRY8;J3QL04 ASPSCR1 Tether containing UBX domain for GLUT4 1 S(0.001)LS(0.568)S(0.432)PGGPSKPK 76.156 0.026557 64501000 3979.3 4425 4132.2 3688 4159.4 3913.3 3900.8 3934.6 3842.5 3920.2 TRUE FALSE 3640.839639 4136.931696 3851.717777 3972.050399 3993.72229 4134.867664 3640.584749 3900.200207 4241.941626 4405.863972 0.826362244 0.938960377 0.874225306 0.90153723 0.906456104 0.938491903 0.826304392 0.885229374 0.962794506 1 12.10520924 -8.405383528 3.411725194 0.998194298 0.889313114 0.520629407 0.036870322 0.180293158 3.736773184 0.034294071 0.00913321 3.93E-09 8.405383528 -0.108881184 SLS(ph)SPPSSK ddPTM_A459_MK2206_30min_R1 2 SLSSPPSSK 9 0 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 S(0.002)LS(0.499)S(0.499)PPSSK;S(0.016)LS(0.492)S(0.492)PPS(0.001)SK 117.02 0.0076638 53940000 9452.7 9344.4 9943.4 9091.8 10452.4 8151.9 9470.4 10081.7 7549.5 7126.3 TRUE FALSE 8648.698227 8736.077862 9268.469712 9792.052011 10036.05877 8613.453533 8838.646896 9993.55676 8334.297541 8009.159845 1.07985087 1.090760833 1.157233704 1.222606641 1.253072603 1.075450322 1.103567299 1.247765927 1.040595731 1 12.9674352 -8.459596819 7.075390471 1.000147679 1.152939473 0.413619193 0.064464939 0.224363913 20.44249861 0.065586134 0.01696835 3.47E-09 8.459596819 0.152791794 SLS(ph)SPPSSK ddPTM_A459_MK2206_30min_R2 3 SLSSPPSSK 9 0 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 S(0.035)LS(0.941)S(0.023)PPSSK;S(0.009)LS(0.621)S(0.369)PPSSK;SLS(0.911)S(0.089)PPS(0.001)SK 115.7 0.0080838 84769000 409897 476099 437290 476345 477886 425679 483240 395045 415490 475812 TRUE FALSE 441279.0295 452456.616 451869.0303 437426.0897 459121.7945 441878.5126 419790.0075 446678.7379 451628.5692 460286.2934 0.958705562 0.982989549 0.981712983 0.950334816 0.997470055 0.960007975 0.912019353 0.970436757 0.981190567 1 18.81217196 -6.941193217 24.99995797 0.959528265 0.974307732 0.015026687 0.024429781 217.3255408 92388.10369 0.00862264 0.007604451 1.15E-07 6.941193217 0.014779467 SLS(ph)SPTDNLELSLR ddPTM_A459_MK2206_30min_R2 2 SLSSPTDNLELSLR 14 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 S(0.198)LS(0.754)S(0.048)PTDNLELSLR;S(0.113)LS(0.648)S(0.238)PT(0.001)DNLELSLR 211.75 3.34E-06 17649800 59332 54773 54202 65980 57337 56480 57357 49012 49054 58079 TRUE FALSE 63874.50354 52053.05247 56009.06763 60589.22294 55085.66128 58629.38598 49825.957 55418.03668 53320.62825 56183.88699 1.136882956 0.926476527 0.996888443 1.078409241 0.980453013 1.043526696 0.886837128 0.986368862 0.949037724 1 15.77786882 -7.232708542 24.98853942 0.954424974 1.021369905 0.250967895 0.06005048 1053.453739 916238.6833 0.021998469 0.017037213 5.85E-08 7.232708542 0.066944931 SLS(ph)SPTVTLSAPLEGAK ddPTM_A459_MK2206_30min_R1 2 SLSSPTVTLSAPLEGAK 17 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-2;Q96PU5-9;Q96PU5-6;Q96PU5-5 A0A1B0GVY1;Q96PU5-9 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 S(0.067)LS(0.466)S(0.466)PTVTLSAPLEGAK;S(0.175)LS(0.412)S(0.412)PTVTLSAPLEGAK 334.51 4.15E-136 483390000 4766 5533.1 5138.5 5180.6 6877.7 6673.3 7949.1 7960.6 7623.8 7225.5 TRUE FALSE 4360.626673 5172.894184 4789.712937 5579.61071 6603.746645 7051.136479 7418.830043 7891.001313 8416.321292 8120.64949 0.536980038 0.637004982 0.589818948 0.687089218 0.813204246 0.868297109 0.913575946 0.971720467 1.036409871 1 12.9873794 -6.501539958 0.671363862 1.018166186 0.544882778 0.972428781 0.028543225 0.116001013 0.115933136 0.020110781 0.027984318 3.15E-07 6.501539958 -0.473283408 SLS(ph)SPTVTLSAPLEGAK ddPTM_A459_MK2206_30min_R2 2 SLSSPTVTLSAPLEGAK 17 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-2;Q96PU5-9;Q96PU5-6;Q96PU5-5 A0A1B0GVY1;Q96PU5-9 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 S(0.076)LS(0.459)S(0.459)PT(0.005)VTLSAPLEGAK;S(0.036)LS(0.691)S(0.27)PT(0.002)VTLSAPLEGAK 150.01 0.00027556 162833000 111741 125392 124615 157465 128366 192569 138945 105222 158262 117552 TRUE FALSE 120295.9769 119165.2156 128769.6019 144599.6058 123325.7059 199897.3482 120701.3546 118974.8767 172027.3427 113716.2879 1.057860568 1.047916863 1.132376059 1.271582185 1.084503444 1.757860303 1.061425385 1.046243057 1.51277663 1 16.79507938 -5.58030311 2.075671393 1.259401856 1.047886246 0.110925762 0.222768804 0.719940267 6.172623397 0.065049322 0.153971431 2.63E-06 5.58030311 -0.21151561 SLS(ph)TSGESLYHVLGLDK ddPTM_A459_MK2206_30min_R1 1 SLSTSGESLYHVLGLDK 17 0 Q9H3Z4-2;Q9H3Z4 Q9H3Z4-2 DNAJC5 DnaJ homolog subfamily C member 5 1 S(0.201)LS(0.778)T(0.016)S(0.004)GES(0.001)LYHVLGLDK 136.96 0.00033911 131000000 10745 5153.6 5172.6 4632.3 13248 10620 13609 11277 8496.1 8033.3 TRUE FALSE 9831.081326 4818.099703 4821.498324 4989.080549 12720.30411 11221.29522 12701.16844 11178.40638 9379.299999 9028.525852 1.088891087 0.533652977 0.534029409 0.552590825 1.408901554 1.242871251 1.406782087 1.238120881 1.038851763 1 13.14027473 -6.257882541 24.99918639 1.244717848 0.656798215 0.64907352 0.195789723 183.6986824 1291122.492 0.058663746 0.07275282 5.52E-07 6.257882541 -0.587919633 SLS(ph)TSGESLYHVLGLDK ddPTM_A459_MK2206_30min_R2 3 SLSTSGESLYHVLGLDK 17 0 Q9H3Z4-2;Q9H3Z4 Q9H3Z4-2 DNAJC5 DnaJ homolog subfamily C member 5 1 S(0.174)LS(0.787)T(0.031)S(0.007)GES(0.001)LYHVLGLDK;S(0.22)LS(0.61)T(0.135)S(0.015)GES(0.02)LYHVLGLDK;S(0.13)LS(0.833)T(0.028)S(0.009)GESLYHVLGLDK 139.38 0.00033508 35565680 66127.9 72710.6 67684.5 84458.1 95521.8 108310.5 123646.9 67039.8 120704.3 85128.6 TRUE FALSE 71190.70287 69099.89734 69941.06745 77557.60306 91771.13417 112432.332 107411.9135 75802.13204 131202.9418 82350.86075 0.864480374 0.839091379 0.849305846 0.941794686 1.114391924 1.365284236 1.304320471 0.920477714 1.593218828 1 16.32949611 -6.282914173 2.43262795 1.235984879 0.854709118 0.489452198 0.175740181 0.24625269 2.871997529 0.055738571 0.069802213 5.21E-07 6.282914173 -0.381275761 SLS(ph)VLRSMMYSGELK ddPTM_A459_MK2206_30min_R2 1 SLSVLRSMMYSGELK 15 1 A0A3B3IRL5;C9J381;P20839-2;P20839-4;P20839;P20839-3;P20839-7;P20839-5;P20839-6 A0A3B3IRL5 IMPDH1 Inosine-5-monophosphate dehydrogenase;Inosine-5-monophosphate dehydrogenase 1 1 S(0.004)LS(0.946)VLRS(0.047)MMYS(0.003)GELK 69.314 0.043796 0 12049 18592 13532 13801 14765 15429 20210 11889 11253 11470 TRUE FALSE 12971.4807 17668.74832 13983.15013 12673.41415 14185.25191 16016.16141 17556.40272 13442.93312 12231.7656 11095.73484 1.169051072 1.592391002 1.260227495 1.142187907 1.278441862 1.443452069 1.582265887 1.211540589 1.102384455 1 13.4377176 -8.167709788 3.019414539 1.036700532 1.352146691 0.393608764 0.148152958 0.28175358 4.622343645 0.130227979 0.040649127 6.80E-09 8.167709788 0.315446159 SLS(ph)VLSPR ddPTM_A459_MK2206_30min_R2 1 SLSVLSPR 8 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 S(0.004)LS(0.994)VLS(0.002)PR 89.08 0.03017 2702800 7362.2 9991.7 10937 10156 11351 10753 9597.5 6010.7 7823.8 7119.9 TRUE FALSE 7925.855693 9495.526707 11301.63412 9326.222313 10905.30271 11162.21295 8337.336721 6796.319128 8504.299982 6887.578246 1.150746374 1.378645203 1.640871975 1.354064082 1.583329048 1.620629567 1.210488857 0.986750188 1.234730072 1 12.74978109 -7.465481912 5.425102313 1.084498964 1.459708262 0.570635249 0.150636501 0.156218918 9.795290913 0.067131461 0.043641987 3.42E-08 7.465481912 0.375209298 SLS(ph)VPDSGR ddPTM_A459_MK2206_30min_R1 1 SLSVPDSGR 9 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(0.048)LS(0.952)VPDSGR 110.54 0.010792 16181000 4304.7 3177.6 4589.6 3458.4 4289.5 2522.8 3745.2 3722.1 2584.5 2586.4 TRUE FALSE 3938.56266 2970.737662 4278.070739 3724.766567 4118.640132 2665.638756 3495.364542 3689.558072 2853.168024 2906.822758 1.354937328 1.021987892 1.471734294 1.281387576 1.416887259 0.917028308 1.202469098 1.269275212 0.981541794 1 11.50522739 -6.749675249 24.99939976 1.098917946 1.300884029 0.380138912 0.148365033 279.816397 594623.7209 0.048830625 0.048450553 1.78E-07 6.749675249 0.201966083 SLS(ph)VPDSGR ddPTM_A459_MK2206_30min_R2 4 SLSVPDSGR 9 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(0.001)LS(0.999)VPDSGR;S(0.001)LS(0.999)VPDSGR;S(0.001)LS(0.999)VPDSGR;S(0.001)LS(0.999)VPDSGR 123.11 0.0057306 76141000 538189 576803 646572 747544 637631 602224 707946 548898 571493 778707 TRUE FALSE 579393.1636 548159.8018 668128.3878 686467.2639 612594.4031 625142.0563 614991.8398 620640.8532 621200.4281 753297.8544 0.769142193 0.727680025 0.886937861 0.911282649 0.81321671 0.829873672 0.816399298 0.823898342 0.824641175 1 19.52286089 -14.52287875 0.387881161 3.609300366 0.820378606 0.541929712 0.048989034 567.1877441 4.138637215 1248.378034 0.035235285 3.00E-15 14.52287875 -2.78892176 SLS(ph)VPVDLSR ddPTM_A459_MK2206_30min_R1 3 SLSVPVDLSR 10 0 Q9NYF3;D6RHW3 Q9NYF3 FAM53C Protein FAM53C 1 SLS(1)VPVDLSR;S(0.046)LS(0.954)VPVDLSR;S(0.01)LS(0.99)VPVDLSR 177.57 8.38E-05 63849400 14375.8 12748.2 13641.7 12298.9 15322.3 12303.4 12875.5 12445.6 11003.3 10812 TRUE FALSE 13153.06272 11918.28986 12715.73941 13246.16341 14711.98035 13000.00788 12016.59889 12336.78943 12147.13241 12151.47219 1.082425448 0.980810364 1.04643612 1.090087127 1.21071588 1.069829867 0.988900662 1.0152506 0.99964286 1 13.56884349 -7.211301204 6.378078718 1.002255479 1.080782397 0.344856029 0.053465363 0.302332438 29.8574799 0.023291311 0.017821858 6.15E-08 7.211301204 0.078526918 SLS(ph)VPVDLSR ddPTM_A459_MK2206_30min_R2 3 SLSVPVDLSR 10 0 Q9NYF3;D6RHW3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.12)LS(0.88)VPVDLSR;S(0.026)LS(0.974)VPVDLSR;S(0.302)LS(0.698)VPVDLSR 139.31 0.0015418 38605700 71826 83192 82932 87498 89609 88085 87055 65000 81731 77641 TRUE FALSE 77325.05378 79060.80625 85696.91149 80349.13351 86090.50041 91437.1364 75624.57393 73495.72318 88839.81464 75107.58053 1.029523961 1.052634177 1.140988844 1.06978727 1.14622918 1.217415549 1.006883372 0.978539352 1.182834196 1 16.1966709 -10.73606397 5.135948349 0.99999174 1.09079369 0.119995199 0.074424843 7.24E-06 1.11E-06 0.074107178 0.017971996 1.84E-11 10.73606397 0.09080195 SLS(ph)YEEPR ddPTM_A459_MK2206_30min_R1 3 SLSYEEPR 8 0 Q8IZD4;Q8IZD4-2;F5GZK9 Q8IZD4 DCP1B mRNA-decapping enzyme 1B 1 SLS(1)YEEPR;S(0.001)LS(0.999)YEEPR;SLS(1)YEEPR 140.17 0.0023584 73066700 17754.6 15039.1 17224.8 13892.3 17256.2 13557.1 15124.4 14365.6 11491.3 11818.7 TRUE FALSE 16244.47804 14060.05186 16055.62857 14962.28735 16568.84901 14324.69129 14115.47887 14240.00307 12685.86176 13282.88978 1.222962646 1.058508509 1.208745147 1.126433148 1.247382858 1.078431841 1.062681322 1.072056104 0.955052851 1 13.69728143 -7.493756203 1.152180947 0.990591151 1.164137215 0.601008911 0.058109617 0.351115498 0.87264304 0.042889099 0.020223727 3.21E-08 7.493756203 0.173546065 SLS(ph)YEEPR ddPTM_A459_MK2206_30min_R2 4 SLSYEEPR 8 0 Q8IZD4;Q8IZD4-2;F5GZK9 Q8IZD4 DCP1B mRNA-decapping enzyme 1B 1 S(0.024)LS(0.976)YEEPR;S(0.045)LS(0.955)YEEPR;S(0.224)LS(0.776)YEEPR;S(0.046)LS(0.951)Y(0.003)EEPR 125.71 0.0050199 123278000 576761 622310 639896 784348 689392 651002 732394 541277 615175 748726 TRUE FALSE 620918.2656 591406.9903 661229.8133 720264.2594 662323.0062 675776.3373 636229.788 612023.7624 668681.8095 724295.1319 0.857272455 0.816527634 0.9129287 0.994434765 0.91443802 0.933012397 0.878412349 0.844992235 0.923217319 1 19.46621815 SLS(ph)YSEILR ddPTM_A459_MK2206_30min_R2 1 SLSYSEILR 9 0 Q5JVZ5;Q96JJ3;H0YCM7;Q96JJ3-3;Q5JW01 Q5JVZ5 ELMO2 Engulfment and cell motility protein 2 1 SLS(0.998)YS(0.001)EILR 98.04 0.019096 0 7375.9 12059 8297.7 8581.8 9286.8 9347.8 8945.2 6485.3 7120.3 8217 TRUE FALSE 7940.604575 11460.1676 8574.341177 7880.639488 8922.15357 9703.537079 7770.684495 7332.950977 7739.610823 7948.879963 0.998958924 1.441733634 1.078685452 0.991415083 1.122441603 1.220742686 0.977582317 0.922513739 0.973673129 1 12.95653588 -7.339171905 6.877097964 0.960191446 1.145074699 0.329885969 0.121239878 0.313538034 23.62694699 0.052115104 0.034976106 4.58E-08 7.339171905 0.184883253 SLS(ph)YSPVER ddPTM_A459_MK2206_30min_R2 2 SLSYSPVER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.133)LS(0.866)YS(0.001)PVER;S(0.008)LS(0.832)YS(0.16)PVER 138.25 0.0024831 38091000 47952 55836 55104 47402 63608 50138 60816 33672 36297 49446 TRUE FALSE 51623.24199 53063.26543 56941.13986 43529.10497 61110.43032 52046.03672 52830.78615 38073.04601 39454.04745 47832.58107 1.079248513 1.109354006 1.190425827 0.910030444 1.277590064 1.088087566 1.104493736 0.795964699 0.824836264 1 15.54570602 -7.751851948 24.71719831 0.857800365 1.109737677 0.532262155 0.100560916 115.1986429 296993.9506 0.045855934 0.026026596 1.77E-08 7.751851948 0.251937312 SLSDNGQPGT(ph)PDPADSGGTSAK ddPTM_A459_MK2206_30min_R2 4 SLSDNGQPGTPDPADSGGTSAK 22 0 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 SLSDNGQPGT(0.991)PDPADS(0.009)GGTSAK;SLSDNGQPGT(0.994)PDPADS(0.006)GGTSAK;SLSDNGQPGT(1)PDPADSGGTSAK;SLSDNGQPGT(0.996)PDPADS(0.004)GGTSAK 283.05 8.07E-138 0 226248 245673 222828 228587 254143 227552 282001 190493 211569 233838 TRUE FALSE 243569.7208 233473.2361 230256.9743 209910.7109 244164.0689 236211.6508 244973.93 215391.0892 229970.8892 226207.8852 1.076751682 1.032118026 1.017899858 0.92795488 1.079379123 1.044223771 1.082959286 0.952182056 1.016635158 1 17.78728969 -7.975805767 0.004828306 3.11E-05 2.0325245 0.05513044 0.048447233 15748.32493 77.65024862 16346.99307 16334.01038 1.06E-08 7.975805767 2.032493395 SLSDS(ph)ESDDSK ddPTM_A459_MK2206_30min_R1 3 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 SLS(0.126)DS(0.873)ES(0.001)DDSK;S(0.003)LS(0.002)DS(0.982)ES(0.014)DDSK;S(0.003)LS(0.017)DS(0.951)ES(0.028)DDSK 215.77 2.07E-05 748440000 11177.8 12950 12544 10725.1 8126.1 7633.6 9577.2 9900.5 8291.1 11269.9 TRUE FALSE 10227.06941 12106.95265 11692.54823 11551.14906 7802.42023 8065.807835 8938.322463 9813.940972 9152.989515 12666.1003 0.80743632 0.955854791 0.92313719 0.911973598 0.616008088 0.636802776 0.70568859 0.774819459 0.722636747 1 13.62868479 -6.238749125 24.283651 0.724258892 0.905299872 0.339501583 0.105261397 549.3102772 587884.4478 0.030000914 0.038699857 5.77E-07 6.238749125 0.181040979 SLSDS(ph)ESDDSK ddPTM_A459_MK2206_30min_R2 3 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 SLS(0.359)DS(0.601)ES(0.04)DDSK;S(0.018)LS(0.123)DS(0.858)ESDDSK;SLS(0.043)DS(0.644)ES(0.308)DDS(0.004)K 215.77 2.07E-05 1392008800 233038 241746 238058 211708 243433 178143 287896 205483 174625 267610 TRUE FALSE 250879.5685 229741.2452 245994.7349 194410.7792 233874.5973 184922.3567 250094.9094 232340.3336 189813.5669 258877.9076 0.969103817 0.887450178 0.950234561 0.750974778 0.903416593 0.714322664 0.966072817 0.897490001 0.733216552 1 17.98191233 -5.693350848 24.99999962 0.849069804 0.930782049 0.142965668 0.093109561 103.1984454 37889.13559 0.024028013 0.041617732 2.03E-06 5.693350848 0.081712245 SLSDSES(ph)DDSK ddPTM_A459_MK2206_30min_R1 1 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 S(0.056)LS(0.362)DS(0.193)ES(0.389)DDSK 185.3 2.03E-05 71989000 2795.7 2685.9 3124.1 2581.4 2146 1959.9 2416.2 2061 1768.8 2458.2 TRUE FALSE 2557.911034 2511.047422 2912.044796 2780.219875 2060.520276 2070.867844 2255.019707 2042.980894 1952.67309 2762.740374 0.925860084 0.908897356 1.054042147 1.006326871 0.745824796 0.749570196 0.816225704 0.739476251 0.706788487 1 11.43188428 -6.261142406 24.99999879 0.778946419 0.974879925 0.514226866 0.085434955 20.19944019 1700444.141 0.025083979 0.030397943 5.48E-07 6.261142406 0.195933506 SLSDSES(ph)DDSK ddPTM_A459_MK2206_30min_R2 1 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 S(0.001)LS(0.024)DS(0.07)ES(0.9)DDS(0.004)K 92.781 0.024525 18484000 21213 19098 19044 13146 17930 13447 21209 14738 11269 22806 TRUE FALSE 22837.08359 18149.62109 19678.91746 12071.92975 17225.97811 13958.73501 18424.23282 16664.3072 12249.15725 22061.84209 1.035139473 0.822670248 0.891988864 0.547185938 0.780804161 0.632709406 0.835117609 0.755345231 0.555219152 1 14.42926564 -4.70060571 1.236603182 0.727833314 1.199854143 0.293265652 0.134930966 2.029329022 2.355725719 0.038306088 1.289382272 1.99E-05 4.70060571 0.472020828 SLSEQPVMDT(ph)ATATEQAK ddPTM_A459_MK2206_30min_R2 1 SLSEQPVMDTATATEQAK 18 0 P18615;P18615-3;A0A0A0MT02;P18615-4;A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 NELFE Negative elongation factor E 1 S(0.023)LS(0.023)EQPVMDT(0.95)AT(0.003)ATEQAK 113.95 0.0026407 8774300 40718 41929 44471 50420 47463 41035 52326 37189 35280 50743 TRUE FALSE 43835.40139 39846.86683 45953.64094 46300.52471 45599.36414 42596.61568 45455.53335 42049.72999 38348.59063 49087.26007 0.893009741 0.811755775 0.936162273 0.943228949 0.928944986 0.867773341 0.926014882 0.856632249 0.781233065 1 15.58306102 -10.28747063 14.99810547 0.999999999 0.885434654 0.313602418 0.051902607 0 0 0.05239165 0.012706842 5.16E-11 10.28747063 -0.114565345 SLSFPILNPALSQPSQPS(ph)SPLPGSHGR ddPTM_A459_MK2206_30min_R1 1 SLSFPILNPALSQPSQPSSPLPGSHGR 27 0 Q8ND24;E9PN76;Q8ND24-2 Q8ND24 RNF214 RING finger protein 214 1 SLSFPILNPALSQPS(0.028)QPS(0.641)S(0.322)PLPGS(0.009)HGR 111.98 4.55E-10 19490000 3139.6 2554.9 2510.8 2005.2 2855.2 2080.9 2441.5 2623.2 1631.8 1882.8 TRUE FALSE 2872.560533 2388.575546 2340.373891 2159.640851 2741.471338 2198.71876 2278.63199 2600.265639 1801.431449 2116.055478 1.357507193 1.128786825 1.106007813 1.020597462 1.295557402 1.039064799 1.076829985 1.22882678 0.851315794 1 11.04716174 -4.725817254 2.848987955 1.090389774 1.428947355 0.338141124 0.11600406 0.626875663 6.168168764 0.028151032 0.531301529 1.88E-05 4.725817254 0.338557581 SLSFPILNPALSQPSQPSS(ph)PLPGSHGR ddPTM_A459_MK2206_30min_R1 1 SLSFPILNPALSQPSQPSSPLPGSHGR 27 0 Q8ND24;E9PN76;Q8ND24-2 Q8ND24 RNF214 RING finger protein 214 1 SLSFPILNPALSQPS(0.001)QPS(0.419)S(0.575)PLPGS(0.005)HGR 136.63 2.71E-12 14361000 5630.8 4572.3 4597.8 3528.7 5175 4476.2 4944.8 4214 3612.3 3607 TRUE FALSE 5151.870891 4274.642439 4285.714146 3800.481085 4968.868792 4729.638576 4614.941414 4177.157442 3987.811512 4053.862391 1.270854902 1.054461653 1.057192803 0.937496323 1.22571225 1.16669934 1.138406036 1.030414217 0.983706679 1 11.9850814 -7.903488703 4.344308872 0.995853613 1.114917277 0.270759416 0.088653098 0.325004987 10.85395047 0.05500863 0.024761348 1.25E-08 7.903488703 0.119063664 SLSFPILNPALSQPSQPSS(ph)PLPGSHGR ddPTM_A459_MK2206_30min_R2 2 SLSFPILNPALSQPSQPSSPLPGSHGR 27 0 Q8ND24;E9PN76;Q8ND24-2 Q8ND24 RNF214 RING finger protein 214 1 SLSFPILNPALSQPSQPS(0.099)S(0.869)PLPGS(0.031)HGR;SLSFPILNPALSQPS(0.058)QPS(0.328)S(0.56)PLPGS(0.054)HGR 196.22 6.05E-40 23009600 31165.8 37884 33673.7 40015.6 38780.4 34976.7 36042.9 27679 37128 36433 TRUE FALSE 33551.87761 36002.73565 34796.36435 36746.19748 37257.68664 36307.76283 31310.42393 31296.74034 40357.32633 35244.19419 0.95198311 1.021522451 0.987293515 1.042617041 1.057129763 1.03017713 0.888385297 0.887997046 1.145077289 1 15.105098 -9.36590161 14.81628059 1.000004149 0.998578534 0 0.074177973 0 0 0.072791688 0.017654578 4.31E-10 9.36590161 -0.001425615 SLSFS(ph)EPQQPAPAMK ddPTM_A459_MK2206_30min_R2 1 SLSFSEPQQPAPAMK 15 0 Q9H8N7 Q9H8N7 ZNF395 Zinc finger protein 395 1 S(0.006)LS(0.041)FS(0.954)EPQQPAPAMK 123.95 0.0013829 4813100 23260 27780 28541 37130 27824 41622 48550 32991 43813 41515 TRUE FALSE 25040.80348 26400.4856 29492.5427 34096.36023 26731.48996 43205.95438 42175.32668 37303.03698 47623.77554 40160.36895 0.623520255 0.65737657 0.734369316 0.849005154 0.665618635 1.075835594 1.050172789 0.928851949 1.18584009 1 15.2934849 -6.763032447 24.99999935 1.043820416 0.712801132 0.809819885 0.082860614 18.87097126 296138.2145 0.028829287 0.026773482 1.73E-07 6.763032447 -0.331019284 SLSGS(ph)PLK ddPTM_A459_MK2206_30min_R2 1 SLSGSPLK 8 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 S(0.001)LS(0.244)GS(0.755)PLK 112.11 0.011314 86547000 60291 60466 54490 57926 54130 53988 85343 57728 46056 55317 TRUE FALSE 64906.92532 57463.34637 56306.6694 53193.2605 52004.58422 56042.55117 74137.36158 65273.24781 50061.86763 53512.01082 1.21294125 1.073840162 1.052224884 0.994043387 0.971830126 1.047289203 1.385434045 1.219786863 0.935525817 1 15.70757512 SLSGS(ph)SPCPK ddPTM_A459_MK2206_30min_R1 2 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SLS(0.001)GS(0.782)S(0.217)PCPK;SLSGS(0.5)S(0.5)PCPK 181.31 0.00013463 284100000 15243.9 16185.8 16479.9 14488.9 14923.5 12632.7 15893.5 15166.2 13854.3 12744.7 TRUE FALSE 13947.32626 15132.10148 15361.2903 15604.83759 14329.06539 13347.95256 14833.27361 15033.60351 15294.50406 14323.60965 0.973729848 1.056444698 1.072445471 1.089448677 1.000380891 0.931884691 1.03558209 1.049568082 1.067782803 1 13.80610749 -3.558920022 14.68568415 1.029654258 1.036367847 0 0.047362862 0 0 0.011593601 0 0.000276109 3.558920022 0.006713589 SLSGS(ph)SPCPK ddPTM_A459_MK2206_30min_R2 2 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SLSGS(0.776)S(0.224)PCPK;SLSGS(0.5)S(0.5)PCPK 179.19 0.00010588 678180000 418790 468500 450430 463570 502000 397770 593050 439260 404960 519190 TRUE FALSE 450852.8844 445234.9713 465447.1114 425694.8481 482288.9577 412907.4161 515181.8226 496672.7902 440182.6888 502248.8728 0.897668285 0.886482769 0.926726045 0.847577508 0.960258915 0.822117158 1.025750082 0.98889777 0.876423448 1 18.9380429 -7.268976389 24.99880285 0.971842636 0.892888058 0.386765394 0.050895816 641.8455291 2128867.829 0.020095817 0.013842681 5.38E-08 7.268976389 -0.078954578 SLSGSS(ph)PCPK ddPTM_A459_MK2206_30min_R1 1 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SLSGS(0.029)S(0.971)PCPK 105.13 0.012697 114080000 11953 11866 13653 11727 11627 11111 12867 11800 10648 10575 TRUE FALSE 10936.33458 11093.52124 12726.2724 12630.21557 11163.87197 11740.09522 12008.66591 11696.83384 11754.8977 11885.11084 0.920171022 0.933396532 1.070774398 1.062692283 0.939315764 0.987798547 1.010395786 0.984158583 0.989044012 1 13.53686774 -5.088702863 9.604844 1.004151793 0.923446252 0.433695136 0.036100352 0.376145545 38.22022655 0.009849629 0.026203359 8.15E-06 5.088702863 -0.080705541 SLSGSS(ph)PCPK ddPTM_A459_MK2206_30min_R2 3 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SLSGS(0.232)S(0.768)PCPK;SLSGS(0.085)S(0.915)PCPK;SLSGS(0.226)S(0.774)PCPK 193.62 0.00017251 79307000 270552 307123 301566 335375 334965 284914 374911 277842 289191 353722 TRUE FALSE 291265.6691 291871.7184 311620.0599 307973.7897 321812.591 295756.6019 325684.7354 314156.9034 314344.3104 342180.0801 0.851205801 0.852976942 0.910690242 0.900034244 0.94047728 0.864330273 0.951793381 0.918104009 0.918651695 1 18.38439625 -1.522878746 0.03294435 1.318416541 0.295298537 0.665244068 0.025747277 698.3639779 1.767483512 16.75352008 44.19043275 0.03 1.522878746 -1.023118004 SLSKPEPTYVS(ph)PPCPR ddPTM_A459_MK2206_30min_R2 1 SLSKPEPTYVSPPCPR 16 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SLSKPEPT(0.224)Y(0.017)VS(0.76)PPCPR 58.864 0.043315 6057300 19415 21861 17044 19749 23405 22876 23624 17475 22116 25698 TRUE FALSE 20901.42733 20775.41453 17612.23845 18135.44353 22486.0021 23746.56221 20522.14042 19759.0425 24039.6097 24859.47636 0.840783089 0.835714084 0.70847182 0.729518324 0.904524366 0.955231794 0.825525853 0.794829393 0.967019955 1 14.60150829 -6.273721844 24.5815344 0.895849064 0.777689133 0.443913804 0.070088387 652.7644667 1306408.805 0.022652406 0.025877109 5.32E-07 6.273721844 -0.118159931 SLSKS(ph)DSDLLTCSPTEDATMGSR ddPTM_A459_MK2206_30min_R2 3 SLSKSDSDLLTCSPTEDATMGSR 23 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.018)LS(0.207)KS(0.595)DS(0.178)DLLT(0.002)CS(0.001)PTEDATMGSR;S(0.016)LS(0.059)KS(0.906)DS(0.02)DLLTCSPTEDATMGSR;S(0.054)LS(0.161)KS(0.604)DS(0.181)DLLTCSPTEDATMGSR 111.99 7.66E-06 24555400 75025 98426 86236 110712 98064 86361 109327 88444 88886 98601 TRUE FALSE 80768.97168 93538.30796 89111.0652 101666.4754 94213.51463 89647.52837 94972.23357 100003.9345 96617.14361 95383.65745 0.846779981 0.9806534 0.934238292 1.065868915 0.98773225 0.939862559 0.995686642 1.048438875 1.01293184 1 16.54145448 -3.841905753 1.099942435 1.002396792 4.28E-11 0.583314782 0.038344691 8.337205893 1.752153856 0.012106843 15.82675444 0.000143911 3.841905753 -1.002396792 SLSLEAT(ph)SPLSAEK ddPTM_A459_MK2206_30min_R1 2 SLSLEATSPLSAEK 14 0 Q86YC2;H3BN63 Q86YC2 PALB2 Partner and localizer of BRCA2 1 SLSLEAT(0.631)S(0.369)PLSAEK;SLSLEAT(0.636)S(0.361)PLS(0.003)AEK 242.07 2.54E-19 34699000 9929.5 10364.3 9292.3 8492.1 8458.1 7679.5 8808.4 8121.6 7697.4 7522.3 TRUE FALSE 9084.943883 9689.582186 8661.564566 9146.163013 8121.195967 8114.306654 8220.807708 8050.593707 8497.572275 8454.219314 1.074604709 1.146123826 1.024525653 1.08184596 0.960608622 0.959793726 0.972391111 0.952257495 1.005127967 1 13.04545582 -6.056707537 1.649829385 0.970847772 1.096411528 0.690336945 0.033991227 0.193990893 1.058641406 0.011107486 0.017763584 8.78E-07 6.056707537 0.125563756 SLSLEAT(ph)SPLSAEK ddPTM_A459_MK2206_30min_R2 2 SLSLEATSPLSAEK 14 0 Q86YC2;H3BN63 Q86YC2 PALB2 Partner and localizer of BRCA2 1 SLSLEAT(0.5)S(0.5)PLSAEK;SLSLEAT(0.5)S(0.5)PLSAEK 218.6 2.40E-08 18064800 184897 204450 189498 193580 204105 178157 237090 178844 158501 213460 TRUE FALSE 199052.8565 194297.3103 195815.7687 177763.8948 196090.8122 184936.8895 205959.7982 202219.5249 172287.1305 206494.8177 0.963960543 0.940930685 0.948284179 0.86086371 0.949616142 0.895600633 0.997409042 0.979295883 0.834341183 1 17.65574605 -7.235409574 24.98310759 0.951036211 0.926248296 0.05748199 0.051815132 2674.72217 2567171.569 0.019567336 0.015150468 5.82E-08 7.235409574 -0.024787915 SLSLEATS(ph)PLSAEK ddPTM_A459_MK2206_30min_R2 1 SLSLEATSPLSAEK 14 0 Q86YC2;H3BN63 Q86YC2 PALB2 Partner and localizer of BRCA2 1 SLSLEAT(0.145)S(0.84)PLS(0.015)AEK 196.97 0.00011051 6201900 52335 56018 51235 56428 55421 47519 62076 45962 49337 57557 TRUE FALSE 56341.80784 53236.22758 52943.14933 51817.6519 53244.89307 49327.36884 53925.34663 51969.39121 53628.24308 55678.9198 1.011905548 0.956128958 0.950865238 0.930651171 0.956284591 0.885925392 0.968505618 0.933376427 0.963169603 1 15.7648436 -8.574055703 7.339031668 0.999999649 0.947665406 0.20570075 0.030038061 1.315119974 187.589 0.02875779 0.007437503 2.67E-09 8.574055703 -0.052334243 SLSNS(ph)NPDIS(ph)GTPTSPDDEVR ddPTM_A459_MK2206_30min_R2 1 SLSNSNPDISGTPTSPDDEVR 21 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 2 SLS(0.005)NS(0.995)NPDIS(0.589)GT(0.002)PT(0.242)S(0.167)PDDEVR 236.96 4.93E-66 0 7506 7345.3 7806.8 10005 9115.9 11313 8180.5 6153.9 9133.5 9412.2 TRUE FALSE 8080.665131 6980.543083 8067.074816 9187.559496 8757.963962 11743.52414 7106.390523 6958.235859 9927.91532 9105.080685 0.887489679 0.766664605 0.885997071 1.009058548 0.96187659 1.289777054 0.780486277 0.764214629 1.090370933 1 13.15245609 -5.577058328 4.57286044 0.977912048 0.82610423 0.170883853 0.142739356 0.373318438 16.31066992 0.040961843 0.075070216 2.65E-06 5.577058328 -0.151807818 SLSNS(ph)NPDISGTPTSPDDEVR ddPTM_A459_MK2206_30min_R1 3 SLSNSNPDISGTPTSPDDEVR 21 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 SLS(0.002)NS(0.998)NPDISGTPTSPDDEVR;SLS(0.031)NS(0.969)NPDISGTPTSPDDEVR;SLSNS(1)NPDISGTPTSPDDEVR 388.81 3.76E-295 109778000 9145 9263.7 8368.7 8162.3 9188.8 8725.5 9394.6 9060.4 7981.4 7509.1 TRUE FALSE 8367.169728 8660.631446 7800.655961 8790.96176 8822.790638 9219.53027 8767.903375 8981.185878 8811.095092 8439.383999 0.991443182 1.026216066 0.924315799 1.041659173 1.045430643 1.092441139 1.038926938 1.064199221 1.044044813 1 13.04292198 -5.969642314 24.7693195 1.051717525 0.984842942 0.470090388 0.031890024 149.6438767 122095.7944 0.008605547 0.012763876 1.07E-06 5.969642314 -0.066874583 SLSNS(ph)NPDISGTPTSPDDEVR ddPTM_A459_MK2206_30min_R2 1 SLSNSNPDISGTPTSPDDEVR 21 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 SLSNS(0.988)NPDIS(0.009)GT(0.003)PTSPDDEVR 216.31 2.72E-20 77647000 31109 40591 39952 48846 44718 47628 44650 38649 41420 43569 TRUE FALSE 33490.72896 38575.30996 41283.97974 44855.12555 42962.14663 49440.51691 38787.40137 43700.557 45022.63673 42147.3471 0.794610605 0.915248826 0.979515499 1.064245525 1.019332167 1.173039831 0.920280968 1.036851902 1.068219943 1 15.36315421 -4.92504063 1.342075619 1.041561167 0.731171409 0.620408593 0.060528281 0.65662729 1.277681037 0.017817719 0.260246855 1.19E-05 4.92504063 -0.310389758 SLSNSNPDIS(ph)GTPTSPDDEVR ddPTM_A459_MK2206_30min_R1 1 SLSNSNPDISGTPTSPDDEVR 21 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 SLSNSNPDIS(0.914)GT(0.078)PT(0.007)S(0.002)PDDEVR 201.72 8.30E-17 59540000 1511.7 1676.8 1833.9 1519.1 1884.3 1514.1 1917.5 1818.9 1759 1507.4 TRUE FALSE 1383.121977 1567.640015 1709.419978 1636.101345 1809.244341 1599.827034 1789.587074 1802.997549 1941.854345 1694.148092 0.816411495 0.925326435 1.009014492 0.965736911 1.067937537 0.944325376 1.056334497 1.064250261 1.146212869 1 10.72634428 -3.34922205 0.484354074 1.057407136 1.41E-14 0.660535521 0.051102563 10.56648471 0.642626784 0.030429915 8.604881212 0.000447484 3.34922205 -1.057407136 SLSNSNPDISGT(ph)PTSPDDEVR ddPTM_A459_MK2206_30min_R2 1 SLSNSNPDISGTPTSPDDEVR 21 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 SLSNS(0.012)NPDIS(0.033)GT(0.955)PTSPDDEVR 178.84 8.19E-14 13629000 20124 21185 17836 24269 22409 24666 24275 17681 22971 27214 TRUE FALSE 21664.70891 20132.98371 18430.64334 22286.14507 21529.11006 25604.68191 21087.66334 19991.96741 24968.97606 26326.00941 0.822939344 0.764756382 0.700092561 0.846544751 0.817788588 0.972600196 0.801020125 0.759399843 0.948452751 1 14.68420123 -14.5228785 0.082025652 1.613796413 0.645462419 0.431551365 0.071092314 248.8500723 1.434634393 27.09594069 2.372344887 3.00E-15 14.5228785 -0.968333993 SLSQGST(ph)NSNMLDVQGGAHK ddPTM_A459_MK2206_30min_R2 1 SLSQGSTNSNMLDVQGGAHK 20 0 E9PCH4;Q8TEU7;A0A5F9ZHG7;B7Z7Y1;Q8TEU7-2 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 S(0.071)LS(0.302)QGS(0.093)T(0.533)NS(0.002)NMLDVQGGAHK 145.83 7.00E-06 0 10704 11557 10714 13586 11583 7894.9 13792 14152 12291 11912 TRUE FALSE 11523.50647 10983.09619 11071.19941 12475.98034 11128.19322 8195.345952 11981.09383 16001.71499 13360.04896 11523.31242 1.00001684 0.95311971 0.960765361 1.082673097 0.965711318 0.711197063 1.039726547 1.388638476 1.159393105 1 13.49226786 -7.533319916 24.70632615 1.20724609 0.947235134 0.41601686 0.124718256 165.8441317 392420.8063 0.058111643 0.033596224 2.93E-08 7.533319916 -0.260010956 SLSRT(ph)PETLLPFAEAEAFLKK ddPTM_A459_MK2206_30min_R1 1 SLSRTPETLLPFAEAEAFLKK 21 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 S(0.259)LS(0.259)RT(0.475)PET(0.007)LLPFAEAEAFLKK 90.442 0.00095158 2267200 674.14 628.76 552.31 787.95 1058.2 694.57 414.22 830.81 298.73 111.02 TRUE FALSE 616.8008529 587.8276097 514.820736 848.6380455 1016.049653 733.8959532 386.5881396 823.5463158 329.7840525 124.7739958 4.943344558 4.711138777 4.126025883 6.801401529 8.143120264 5.881802123 3.098306961 6.6003041 2.643051146 1 6.963173482 -2.856011761 8.554058849 5.061308946 6.971182089 0 2.068189194 0 0 0.461141257 0 0.001393119 2.856011761 1.909873143 SLSS(ph)PGGPSKPK ddPTM_A459_MK2206_30min_R1 1 SLSSPGGPSKPK 12 1 J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2;J3QR12;Q9BZE9-4;J3QL04 J3KRY8;J3QL04 ASPSCR1 Tether containing UBX domain for GLUT4 1 S(0.005)LS(0.082)S(0.914)PGGPSKPK 174.21 0.00072272 31064000 8078.1 8749.1 8174.1 6712.5 6626.4 6398.5 6976.6 7422.9 6788.1 6502.6 TRUE FALSE 7391.015175 8179.532 7619.264866 7229.497913 6362.456456 6760.777541 6511.203744 7358.002368 7493.747286 7308.19118 1.011333036 1.119227973 1.042565072 0.989232183 0.870592504 0.925095879 0.890946006 1.006815803 1.025390155 1 12.83529866 -5.815957346 3.239794986 0.947948621 1.066915863 0.431232601 0.053221366 0.216879439 4.617564231 0.016214567 0.026845217 1.53E-06 5.815957346 0.118967242 SLSS(ph)PGGPSKPK ddPTM_A459_MK2206_30min_R2 1 SLSSPGGPSKPK 12 1 J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2;J3QR12;Q9BZE9-4;J3QL04 J3KRY8;J3QL04 ASPSCR1 Tether containing UBX domain for GLUT4 1 S(0.001)LS(0.119)S(0.88)PGGPSKPK 95.195 0.010042 92102000 295200 278920 263240 274980 256960 200390 281370 229380 183470 244560 TRUE FALSE 317800.739 265069.2384 272016.2902 252513.2544 246870.4593 208015.9819 244425.781 259360.7536 199427.889 236580.0272 1.343311786 1.120421033 1.149785522 1.06734815 1.043496622 0.879262651 1.033163213 1.096291841 0.842961645 1 17.85196876 -1.522878745 0.438918564 0.971724215 8.457390882 0.677271482 0.075719571 50.36736699 0.621530271 0.048473351 335.4532414 0.03 1.522878745 7.485666667 SLSS(ph)PTDNLELSLR ddPTM_A459_MK2206_30min_R1 2 SLSSPTDNLELSLR 14 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 S(0.001)LS(0.076)S(0.923)PT(0.001)DNLELSLR;S(0.001)LS(0.029)S(0.97)PTDNLELSLR 253.79 7.65E-28 146540000 8097.2 7964.7 7587.8 5841.1 8727.4 7558.3 7433.3 6820.2 5931.6 6504.9 TRUE FALSE 7408.49062 7446.196582 7072.761277 6290.982534 8379.769177 7986.244414 6937.43812 6760.57171 6548.211046 7310.776121 1.013365817 1.018523404 0.967443286 0.860508164 1.146221555 1.092393514 0.948933192 0.924740629 0.895693007 1 12.83580886 -7.496574998 23.68277383 0.933497444 1.013724611 0.190875343 0.074372765 651.0840091 586210.7061 0.033399488 0.022415355 3.19E-08 7.496574998 0.080227167 SLSS(ph)PTVTLSAPLEGAK ddPTM_A459_MK2206_30min_R2 2 SLSSPTVTLSAPLEGAK 17 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-2;Q96PU5-9;Q96PU5-6;Q96PU5-5 A0A1B0GVY1;Q96PU5-9 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 SLS(0.031)S(0.969)PTVTLSAPLEGAK;SLS(0.259)S(0.741)PTVTLSAPLEGAK 221.34 5.11E-12 26569000 108994 98476 106133 115308 98429 123106 109019 90973 104921 98574 TRUE FALSE 117338.6644 93585.82504 109671.4212 105886.9675 94564.18289 127790.8851 94704.67434 102863.4835 114046.8389 95357.53845 1.230512724 0.981420311 1.150107511 1.110420521 0.991680201 1.340123572 0.993153513 1.078713703 1.195991851 1 16.54105937 -10.92864005 3.118319255 0.998409569 1.113587972 0.093481986 0.110079223 32419233.17 42426116.98 462795.4553 0.025444643 1.18E-11 10.92864005 0.115178403 SLSS(ph)SPVK ddPTM_A459_MK2206_30min_R2 1 SLSSSPVK 8 0 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 SLS(0.002)S(0.499)S(0.499)PVK 102.62 0.016075 13470000 51471 53994 44305 55009 55395 46371 73278 56247 54764 50789 TRUE FALSE 55411.65933 51312.73647 45782.10659 50514.58873 53219.91396 48135.6809 63656.51058 63598.67602 59527.27373 49131.75909 1.127817533 1.044390379 0.93182307 1.028145331 1.083207989 0.979726389 1.295628566 1.294451434 1.211584418 1 15.58436827 -7.257884784 24.99797958 1.224953726 1.030586308 0.433117956 0.092394896 254.1210659 1787133.887 0.0353281 0.026262116 5.52E-08 7.257884784 -0.194367418 SLSSPTDNLELS(ph)LR ddPTM_A459_MK2206_30min_R1 1 SLSSPTDNLELSLR 14 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 SLSSPTDNLELS(1)LR 93.51 0.014345 3091100 306.2 277.62 216.23 223.6 296.1 270.88 338.85 224.57 252.94 252.72 TRUE FALSE 280.1560821 259.5468875 201.5529101 240.8217107 284.30571 286.2169915 316.2459348 222.6066082 279.2340182 284.0288615 0.986364838 0.913804626 0.70962123 0.847877605 1.000974719 1.0077039 1.113428871 0.783746437 0.983118464 1 8.149893726 -6.257447468 24.00537376 0.978589821 0.856887901 0.246439761 0.099872711 303.6618263 1826067.841 0.031447827 0.039048149 5.53E-07 6.257447468 -0.12170192 SLSSS(ph)PQAQPPRPAELSDEEVAELFQR ddPTM_A459_MK2206_30min_R1 1 SLSSSPQAQPPRPAELSDEEVAELFQR 27 1 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 S(0.003)LS(0.031)S(0.154)S(0.797)PQAQPPRPAELS(0.014)DEEVAELFQR 107.04 1.07E-09 58552000 1303.9 1177.2 1201.5 1216.5 1440.5 1273.2 1184.7 1355.5 959.88 943.23 TRUE FALSE 1192.996458 1100.564066 1119.945528 1310.195041 1383.121835 1345.287484 1105.670825 1343.649006 1059.662961 1060.084453 1.125378694 1.038185271 1.056468212 1.235934587 1.304727968 1.269038027 1.043002584 1.267492417 0.999602397 1 10.04996349 -8.287734933 23.59321279 0.999800963 1.165601326 0.332808391 0.094961687 550.8893785 494266.2619 0.098934872 0.025588643 5.16E-09 8.287734933 0.165800363 SLSSS(ph)PQAQPPRPAELSDEEVAELFQR ddPTM_A459_MK2206_30min_R2 2 SLSSSPQAQPPRPAELSDEEVAELFQR 27 1 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 S(0.022)LS(0.1)S(0.169)S(0.706)PQAQPPRPAELS(0.003)DEEVAELFQR;S(0.026)LS(0.066)S(0.202)S(0.706)PQAQPPRPAELSDEEVAELFQR 86.079 3.17E-05 51982000 21698 24931 27434 28920 29069 28661 29354 20644.3 24196 29801 TRUE FALSE 23359.21556 23692.96279 28348.63587 26557.14349 27927.605 29751.71444 25499.78454 23342.58089 26300.52434 28828.59581 0.810279339 0.82185629 0.983351255 0.921208361 0.968746629 1.032020936 0.884530926 0.809702319 0.912306812 1 14.81521295 -5.240139732 20.66843767 0.93399321 0.816067328 0.398372186 0.060171304 100.7401821 97749.37916 0.016695347 0.043958329 5.75E-06 5.240139732 -0.117925882 SLSSS(ph)PVKK ddPTM_A459_MK2206_30min_R1 2 SLSSSPVKK 9 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 SLS(0.004)S(0.203)S(0.792)PVKK;S(0.001)LS(0.302)S(0.089)S(0.608)PVKK 160.91 0.0016441 175741000 18208.4 21205.8 19980.3 18212 17457 16113.3 19807.3 21449.7 14233.8 19889.1 TRUE FALSE 16659.67996 19825.29857 18624.0929 19614.6914 16761.65072 17025.62112 18485.99116 21262.16753 15713.45445 22353.11186 0.745295781 0.886914479 0.833176741 0.877492651 0.749857596 0.761666708 0.826998553 0.951194968 0.702964963 1 14.44818807 -11.32815517 2.83451725 1.050378921 0.820411442 0.366082605 0.072702421 52908798.56 38206942.43 18257550.9 0.018209709 4.70E-12 11.32815517 -0.229967479 SLSSS(ph)PVKK ddPTM_A459_MK2206_30min_R2 1 SLSSSPVKK 9 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 SLS(0.004)S(0.062)S(0.934)PVKK 164.33 0.001747 45245000 153310 175920 167910 152380 183690 130520 245740 168730 161590 187990 TRUE FALSE 165047.5315 167184.0686 173508.0356 139930.0666 176477.4076 135487.0301 213474.0428 190783.5903 175644.8061 181855.9017 0.907573139 0.919321656 0.95409626 0.769455735 0.970424418 0.745024103 1.173863706 1.049092103 0.96584606 1 17.47243622 -7.264473932 24.99997437 1.05129147 0.882317456 0.490470291 0.084539917 230.6268222 1899990.052 0.0332346 0.023493827 5.44E-08 7.264473932 -0.168974014 SLSSSPQAQPPRPAELS(ph)DEEVAELFQR ddPTM_A459_MK2206_30min_R2 1 SLSSSPQAQPPRPAELSDEEVAELFQR 27 1 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 S(0.002)LS(0.019)S(0.054)S(0.177)PQAQPPRPAELS(0.747)DEEVAELFQR 55.871 0.0049842 7092500 5130.5 7147.3 5551.9 5707.3 7318.9 6950.1 7238.5 5445.7 5132.8 4938.8 TRUE FALSE 5523.295025 6792.375475 5736.997575 5240.995333 7031.523211 7214.590926 6288.076255 6157.471688 5579.241666 4777.64736 1.15607005 1.421698791 1.200799712 1.096982456 1.471754334 1.510071879 1.31614491 1.288808324 1.167780132 1 12.22208466 -8.52389846 1.991764698 1.001412393 1.315648421 0.37066326 0.126531716 0.38605409 3.495005189 0.128182952 0.035898147 2.99E-09 8.52389846 0.314236027 SLSTS(ph)GESLYHVLGLDK ddPTM_A459_MK2206_30min_R2 1 SLSTSGESLYHVLGLDK 17 0 Q9H3Z4-2;Q9H3Z4 Q9H3Z4-2 DNAJC5 DnaJ homolog subfamily C member 5 1 S(0.043)LS(0.304)T(0.084)S(0.525)GES(0.039)LY(0.004)HVLGLDK 97.291 0.0056502 13244000 5771.7 8216.1 7033.6 7388.1 10528 10380 10099 4939 9836.1 7024.3 TRUE FALSE 6213.58579 7808.100421 7268.096713 6784.468597 10114.61782 10775.01817 8772.989169 5584.544258 10691.6262 6795.097666 0.914421852 1.149078469 1.069608867 0.998435774 1.488516916 1.58570468 1.291076243 0.821849005 1.573432307 1 12.73027857 -6.238933582 24.68787639 1.299018384 1.043808705 0.230681926 0.232618676 1123.109924 1232002.003 0.070272551 0.090649681 5.77E-07 6.238933582 -0.255209678 SLSVLS(ph)PR ddPTM_A459_MK2206_30min_R1 1 SLSVLSPR 8 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 SLSVLS(1)PR 94.409 0.022719 9672900 4086.5 3553 3581.7 3032.8 3591.3 3289.9 3875.4 3727.3 3103.2 2786.1 TRUE FALSE 3738.921716 3321.699054 3338.584183 3266.386781 3448.250916 3476.171295 3616.879137 3694.712609 3425.788745 3131.263102 1.194061819 1.060817614 1.066210048 1.04315309 1.10123321 1.11014986 1.155086308 1.179943201 1.094059692 1 11.61252902 -6.736878831 3.302990989 1.122864632 1.086031424 0 0.059102119 0.698047652 15.80241221 0.020889696 0.019755233 1.83E-07 6.736878831 -0.036833208 SLSVLS(ph)PR ddPTM_A459_MK2206_30min_R2 3 SLSVLSPR 8 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 SLSVLS(1)PR;SLSVLS(1)PR;SLSVLS(1)PR 96.034 0.021405 34793500 68523 82890 70962 80435 91121 76335 80129 63934 73385 71593 TRUE FALSE 73769.17357 78773.80313 73327.83766 73863.2032 87543.13169 79239.98192 69607.96605 72290.39332 79767.89465 69256.92627 1.065152289 1.137414081 1.058779845 1.066509982 1.26403432 1.144145231 1.005068659 1.043800197 1.151767757 1 16.07967074 -11.21691075 2.553883453 0.982851277 1.103816748 0.165947621 0.069994548 25281571.58 20135210.49 2796081.202 0.018251549 6.07E-12 11.21691075 0.120965471 SLSVS(ph)SDFLGK ddPTM_A459_MK2206_30min_R1 1 SLSVSSDFLGK 11 0 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;H0Y470;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 SLS(0.01)VS(0.925)S(0.065)DFLGK 82.774 0.039349 12752000 1566 2371.6 2375.3 2221.9 1740.3 1459.7 1853.8 2525.9 3142 2681.7 TRUE FALSE 1432.803477 2217.208409 2214.071254 2393.031123 1670.980166 1542.346953 1730.136384 2503.816323 3468.622144 3013.929242 0.475393867 0.73565377 0.734612884 0.793990479 0.554419176 0.511739603 0.574046783 0.83074821 1.150863828 1 11.55742983 -8.023410812 3.682958568 1.067402928 0.634690473 0.746166098 0.104663375 0.123901226 3.51998884 0.080048533 0.029861166 9.48E-09 8.023410812 -0.432712455 SLSYS(ph)PVER ddPTM_A459_MK2206_30min_R1 2 SLSYSPVER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.067)LS(0.136)YS(0.798)PVER;SLS(0.039)YS(0.961)PVER 181.87 0.0014625 88818000 10386.2 9199.4 7569.4 7469.5 9545.6 8670.6 9253.3 7974.2 6935.6 6878.7 TRUE FALSE 9502.79915 8600.517388 7055.610218 8044.802184 9165.378539 9161.521879 8636.029241 7904.48241 7656.580439 7730.885288 1.229199347 1.112488036 0.912652297 1.040605556 1.185553555 1.185054691 1.11708154 1.022455012 0.990388572 1 12.91641792 -7.850204455 4.411192543 0.99904707 1.107078507 0.259942571 0.083479383 0.359263511 12.49363402 0.053939519 0.02490054 1.41E-08 7.850204455 0.108031437 SLSYS(ph)PVER ddPTM_A459_MK2206_30min_R2 2 SLSYSPVER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.001)LS(0.077)YS(0.922)PVER;SLS(0.242)YS(0.758)PVER 152.69 0.0010799 145493000 420260 399390 379360 426550 415400 455220 389310 340140 392050 323270 TRUE FALSE 452435.4287 379556.8734 392007.6731 391699.5005 399089.3088 472543.7161 338193.1294 384597.4659 426149.8003 312721.7264 1.446766856 1.21372083 1.25353514 1.252549687 1.276180307 1.511067752 1.081450698 1.22983929 1.362712483 1 18.25451993 -13.09645365 0.338140207 8.66E-10 1.296741994 0.359833641 0.116298821 151.5934654 3.219091398 106.9775599 0.094256134 8.01E-14 13.09645365 1.296741993 SLT(ph)AHSLLPLAEK ddPTM_A459_MK2206_30min_R1 1 SLTAHSLLPLAEK 13 0 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 S(0.417)LT(0.582)AHSLLPLAEK 115.1 0.0055172 14254000 10661 10829 10426 10697 11522 10845 11018 9759.7 9619 7298.3 TRUE FALSE 9754.225967 10124.03013 9718.312169 11520.88479 11063.05434 11459.03453 10283.00932 9674.371972 10618.92947 8202.468503 1.189181764 1.234266261 1.184803351 1.404563125 1.348746946 1.39702268 1.253648133 1.179446403 1.294601676 1 13.00184243 -9.522186316 0.765157739 0.99211229 1.285698166 0.514162338 0.080358643 4.742424277 2.890130722 0.202513873 0.030331675 3.00E-10 9.522186316 0.293585876 SLT(ph)AHSLLPLAEK ddPTM_A459_MK2206_30min_R2 1 SLTAHSLLPLAEK 13 0 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 S(0.346)LT(0.651)AHS(0.003)LLPLAEK 94.339 0.021571 6356700 69718 113140 102540 103470 92599 90130 101510 70583 87833 85408 TRUE FALSE 75055.66368 107521.6321 105958.6324 95016.17002 88963.09799 93559.96031 88181.61506 79808.44045 95472.55557 82621.14395 0.908431669 1.301381547 1.282463875 1.150022445 1.076759456 1.1323973 1.067300825 0.965956614 1.15554628 1 16.33422342 -6.705715218 1.275896472 1.047519291 1.176182464 0.143104145 0.112080033 0.773001727 2.646655002 0.053487255 0.050779861 1.97E-07 6.705715218 0.128663173 SLT(ph)NDWEDHLAVK ddPTM_A459_MK2206_30min_R1 2 SLTNDWEDHLAVK 13 0 P07900;P07900-2;P08238 P07900;P08238 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta 1 S(0.047)LT(0.953)NDWEDHLAVK;S(0.186)LT(0.814)NDWEDHLAVK 124.46 0.003058 14686900 4650.1 4581.9 4654.7 4265.4 3717.3 4253.1 4759.8 4293.5 3869.2 3870.2 TRUE FALSE 4254.584576 4283.617477 4338.751933 4593.921847 3569.232069 4493.906847 4442.282427 4255.962382 4271.417186 4349.669595 0.978139715 0.984814452 0.997490002 1.056154208 0.820575446 1.033160508 1.021291923 0.978456476 0.982009574 1 12.0866901 SLT(ph)PPPSSTESK ddPTM_A459_MK2206_30min_R1 4 SLTPPPSSTESK 12 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 S(0.008)LT(0.992)PPPSSTESK;S(0.023)LT(0.953)PPPS(0.021)S(0.003)TESK;S(0.018)LT(0.967)PPPS(0.004)S(0.008)T(0.002)ESK;S(0.014)LT(0.946)PPPS(0.032)S(0.006)T(0.001)ESK 112.02 0.015322 94003000 14405.3 14693.1 15434.5 13931.5 14205.7 12497 13451 14440.4 13295.6 11913 TRUE FALSE 13180.05359 13736.57652 14386.84914 15004.50654 13639.85689 13204.56934 12553.70833 14314.14911 14677.7252 13388.87238 0.984403557 1.025969636 1.074537776 1.12066992 1.018745754 0.986234611 0.937622525 1.069107891 1.096262985 1 13.70874684 -6.481539182 24.98865304 1.01552187 1.05354161 0.088704703 0.052004714 1285.435171 777011.1443 0.017661137 0.020023896 3.30E-07 6.481539182 0.03801974 SLT(ph)PPPSSTESK ddPTM_A459_MK2206_30min_R2 1 SLTPPPSSTESK 12 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 S(0.121)LT(0.877)PPPS(0.001)S(0.001)TESK 110.15 0.017165 6254300 47295 59423 52228 64805 56522 47849 68570 50065 37634 57093 TRUE FALSE 50915.94156 56472.14023 53969.25545 59510.2242 54302.66228 49669.92722 59566.67663 56608.6674 40907.33729 55230.06009 0.921888216 1.022489205 0.977171768 1.077497003 0.983208459 0.899327778 1.078519135 1.024961177 0.740671606 1 15.75316608 -8.222568181 24.99992433 0.870335502 0.999780066 0.28988661 0.079974208 545.5738834 350885.6497 0.050941594 0.019253269 5.99E-09 8.222568181 0.129444565 SLT(ph)QPITTEEVVIAATLQASAHQK ddPTM_A459_MK2206_30min_R1 1 SLTQPITTEEVVIAATLQASAHQK 24 0 O95425-4 O95425-4 SVIL Supervillin 1 S(0.161)LT(0.814)QPIT(0.022)T(0.002)EEVVIAATLQASAHQK 153.18 5.94E-10 1593100 406.65 244.43 322.61 339.54 537.69 352.08 331.79 236.83 182.6 64.644 TRUE FALSE 372.0622821 228.5175626 300.712132 365.6914296 516.2726687 372.0144653 309.6568945 234.7594203 201.5819234 72.65258676 5.121115417 3.145346543 4.139042331 5.033426144 7.106046622 5.12045726 4.262159247 3.231260314 2.774600774 1 6.18294226 -8.236296566 1.187195732 1.156038188 4.901725416 0.630554639 0.962042101 0.328977827 0.914473368 1.0169522 0.332490554 5.80E-09 8.236296566 3.745687228 SLTDPSQESHT(ph)EAISDAETSSSDISFSGIATR ddPTM_A459_MK2206_30min_R2 1 SLTDPSQESHTEAISDAETSSSDISFSGIATR 32 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 SLTDPS(0.004)QES(0.103)HT(0.676)EAIS(0.103)DAET(0.035)S(0.043)S(0.014)S(0.014)DIS(0.002)FS(0.002)GIAT(0.003)R 57.144 0.022985 0 23447 35454 28936 39045 37318 29377 33519 30706 29012 32666 TRUE FALSE 25242.12035 33693.40591 29900.7118 35854.8986 35852.70781 30494.96232 29117.91504 34719.37963 31535.41132 31600.1111 0.798798469 1.066243274 0.94622173 1.134644701 1.134575372 0.96502706 0.921449768 1.098710683 0.997952546 1 14.94764201 -4.756138965 24.98543047 1.031097028 0.798798102 0.474938295 0.072728211 154.2321332 726949.9045 0.018660118 0.155494725 1.75E-05 4.756138965 -0.232298926 SLTDPSQESHTEAIS(ph)DAETSSSDISFSGIATR ddPTM_A459_MK2206_30min_R1 3 SLTDPSQESHTEAISDAETSSSDISFSGIATR 32 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 SLTDPSQESHT(0.004)EAIS(0.983)DAET(0.007)S(0.003)S(0.001)SDISFSGIATR;SLTDPS(0.002)QES(0.001)HT(0.002)EAIS(0.906)DAET(0.02)S(0.017)S(0.022)S(0.022)DIS(0.003)FS(0.001)GIAT(0.002)R;SLTDPSQESHTEAIS(1)DAETSSSDISFSGIATR 162.02 3.37E-24 35615000 6423.89 6206.69 7133.98 4774.54 7598.69 7038.55 6980.4 6970.05 5997.99 5124.39 TRUE FALSE 5877.504422 5802.633353 6649.745314 5142.275898 7296.018087 7437.066618 6514.750252 6909.111588 6621.502525 5759.23812 1.02053506 1.007534891 1.154622395 0.892874333 1.266837372 1.291328204 1.131182652 1.199657219 1.149718485 1 12.49166226 -6.273958798 24.99763689 1.186916992 1.027775517 0.377767723 0.095723496 778.7674969 1554969.136 0.028706729 0.032775755 5.32E-07 6.273958798 -0.159141475 SLTDPSQESHTEAIS(ph)DAETSSSDISFSGIATR ddPTM_A459_MK2206_30min_R2 3 SLTDPSQESHTEAISDAETSSSDISFSGIATR 32 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 SLTDPSQESHTEAIS(0.997)DAET(0.002)SSSDISFSGIATR;SLTDPSQESHTEAIS(0.834)DAET(0.133)S(0.017)S(0.007)S(0.007)DIS(0.001)FSGIATR;SLTDPSQESHT(0.002)EAIS(0.949)DAET(0.045)S(0.003)S(0.001)SDISFSGIATR 145.25 1.53E-20 20359000 147601.7 165846.7 149913.5 208348.9 196752.1 212740.3 195003.7 152439.4 187900.5 174456.2 TRUE FALSE 158902.1996 157610.994 154911.5413 191326.1284 189026.624 220836.2812 169399.4799 172363.753 204243.7458 168763.7085 0.941566176 0.933915209 0.917919751 1.133692369 1.120066782 1.308553143 1.003767229 1.021331864 1.210234995 1 17.36464517 -5.761144353 24.99999632 1.118610771 0.931411826 0.461509159 0.090396263 6.962360785 589864.8018 0.025419017 0.040743921 1.73E-06 5.761144353 -0.187198945 SLTEISTDFDRS(ph)SPPLQPPPVNSLTTENR ddPTM_A459_MK2206_30min_R1 1 SLTEISTDFDRSSPPLQPPPVNSLTTENR 29 1 J3KRR7;Q9NQC7-2;Q9NQC7 J3KRR7 CYLD Ubiquitin carboxyl-terminal hydrolase CYLD 1 SLTEISTDFDRS(0.756)S(0.244)PPLQPPPVNSLTTENR 141.29 1.78E-14 18839000 921.13 1020.7 1031.8 826.23 1062.1 1174.6 1043.2 979.07 1140.7 715.43 TRUE FALSE 842.7830565 954.2522445 961.7642908 889.8663778 1019.794308 1241.104837 973.6100314 970.5100942 1259.279847 804.0628696 1.048155671 1.186788099 1.19613071 1.106712437 1.268301704 1.543542034 1.210863066 1.207007724 1.566146 1 9.6511645 -6.399761213 5.164762259 1.321485721 1.143852871 0.2020127 0.159231559 0.3541914 13.47080682 0.048324049 0.054758822 3.98E-07 6.399761213 -0.177632851 SLTEISTDFDRS(ph)SPPLQPPPVNSLTTENR ddPTM_A459_MK2206_30min_R2 1 SLTEISTDFDRSSPPLQPPPVNSLTTENR 29 1 J3KRR7;Q9NQC7-2;Q9NQC7 J3KRR7 CYLD Ubiquitin carboxyl-terminal hydrolase CYLD 1 S(0.003)LT(0.018)EIS(0.125)T(0.125)DFDRS(0.364)S(0.364)PPLQPPPVNSLTTENR 50.189 0.013753 5286000 3782.5 2729.4 3657.1 3579.6 4438 7502.9 5139.2 2972.3 3961.3 5105.7 TRUE FALSE 4072.091108 2593.861965 3779.025889 3287.135229 4263.741821 7788.428117 4464.416867 3360.789815 4305.846714 4939.101427 0.824459908 0.525168799 0.765124172 0.665533048 0.863262657 1.576891714 0.903892526 0.680445596 0.871787465 1 12.27003288 -6.520384526 24.9952182 1.006863535 0.69749661 0.296469764 0.226227361 139.4033566 1397016.993 0.079550131 0.080874391 3.02E-07 6.520384526 -0.309366925 SLTEISTDFDRSS(ph)PPLQPPPVNSLTTENR ddPTM_A459_MK2206_30min_R1 1 SLTEISTDFDRSSPPLQPPPVNSLTTENR 29 1 J3KRR7;Q9NQC7-2;Q9NQC7 J3KRR7 CYLD Ubiquitin carboxyl-terminal hydrolase CYLD 1 SLTEIS(0.001)T(0.002)DFDRS(0.109)S(0.888)PPLQPPPVNSLTTENR 113.68 1.01E-11 50064000 1470.1 1879.9 1650 1926.7 1991.4 1380.6 2087.5 1931.2 1561.9 1464.1 TRUE FALSE 1345.060275 1757.518168 1538.002597 2075.094768 1912.078321 1458.768379 1948.246684 1914.315722 1724.265094 1645.483761 0.817425432 1.068086 0.934681115 1.261084926 1.162015917 0.886528578 1.183996299 1.163375639 1.047877308 1 10.68429607 -4.123310483 1.216495874 1.095431014 2.43E-09 0.327205678 0.111502772 7.443146738 3.008339688 0.033062861 15.1973 7.53E-05 4.123310483 -1.095431011 SLTEISTDFDRSS(ph)PPLQPPPVNSLTTENR ddPTM_A459_MK2206_30min_R2 2 SLTEISTDFDRSSPPLQPPPVNSLTTENR 29 1 J3KRR7;Q9NQC7-2;Q9NQC7 J3KRR7 CYLD Ubiquitin carboxyl-terminal hydrolase CYLD 1 SLTEIS(0.002)T(0.002)DFDRS(0.209)S(0.788)PPLQPPPVNSLTTENR;SLTEISTDFDRS(0.188)S(0.811)PPLQPPPVNSLTTENR 94.295 1.35E-07 58506000 35215 51941 44434 56894 45501 54042 58475 40060 54355 43545 TRUE FALSE 37911.08748 49361.68547 45915.40738 52245.57821 43714.40212 56098.60618 50797.16226 45295.97955 59082.69965 42124.13022 0.899985051 1.171814948 1.090002503 1.240276724 1.037752041 1.331745152 1.205892252 1.075297681 1.402585628 1 15.36235928 -4.183397167 1.508017265 1.182815078 9.12E-17 0.302084422 0.122543614 7.128890238 4.203022276 0.031963619 19.67025932 6.56E-05 4.183397167 -1.182815078 SLTNDWEDHLAVK ddPTM_A459_MK2206_30min_R1 2 SLTNDWEDHLAVK 13 0 P07900;P07900-2;P08238 P07900;P08238 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta 0 ; 214.65 2.33E-06 94739000 14991.8 15520.6 15621.4 14787.8 15473.5 15300.6 15314.8 13398.7 12759.2 11872.7 FALSE TRUE 13716.66868 14510.20612 14561.06289 15926.75892 14857.15773 16166.90675 14293.17764 13281.55658 14085.5645 13343.57971 1.027960186 1.087429793 1.091241122 1.193589671 1.113431182 1.211586928 1.071165156 0.995351837 1.055606127 1 13.70385813 -7.521476323 13.15535028 1.021918642 1.122674097 0.449784824 0.051518867 0.143419162 1228.002167 0.024376048 0.014685597 3.01E-08 7.521476323 0.100755455 SLTNDWEDHLAVK ddPTM_A459_MK2206_30min_R2 4 SLTNDWEDHLAVK 13 0 P07900;P07900-2;P08238 P07900;P08238 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta 0 ;;; 182.37 0.00016519 41870300 266128 315277 282002 371928 381451 297769 366258 312879 270979 321265 FALSE TRUE 286502.9643 299620.8026 291403.8059 341540.2927 366473.3171 309100.808 318167.8846 353773.3596 294548.2636 310782.1494 0.921877157 0.964086268 0.937646536 1.098970109 1.179196803 0.994589968 1.023764992 1.138332302 0.94776442 1 18.24554412 -5.752019701 24.98686536 1.061822494 0.943491574 0.373386331 0.066884806 202.9073784 538231.6278 0.018168926 0.030941576 1.77E-06 5.752019701 -0.11833092 SLTQPITTEEVVIAATLQASAHQK ddPTM_A459_MK2206_30min_R1 1 SLTQPITTEEVVIAATLQASAHQK 24 0 O95425-4 O95425-4 SVIL Supervillin 0 267.54 5.19E-73 3562200 2867.9 1806.8 2207.7 1787.1 3722.3 3213.9 2848.2 2965.1 2013.1 1491.4 FALSE TRUE 2623.970045 1689.176992 2057.847475 1924.742752 3574.032909 3395.868241 2658.201775 2939.176443 2222.368949 1676.165891 1.565459635 1.007762418 1.227711103 1.14830087 2.132266816 2.025973836 1.585882274 1.753511665 1.325864558 1 10.71094923 -6.224974912 24.99429931 1.691793389 1.220226721 0.248612081 0.332078016 711.5336987 487715.3763 0.096562835 0.124658505 5.96E-07 6.224974912 -0.471566668 SLTS(ph)SLENIFSR ddPTM_A459_MK2206_30min_R1 2 SLTSSLENIFSR 12 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 SLT(0.013)S(0.909)S(0.078)LENIFSR;S(0.003)LT(0.072)S(0.853)S(0.072)LENIFSR 217.2 4.92E-08 54568000 4605.7 3659.5 4217.6 3840.6 6279.7 7083.8 11073.2 11345.7 11789.9 10524.1 TRUE FALSE 4213.96103 3421.265885 3931.321063 4136.403677 6029.566252 7484.878634 10334.52703 11246.50574 13015.5023 11827.90496 0.356272818 0.289253752 0.332376788 0.349715667 0.509774662 0.63281525 0.873741129 0.950845122 1.100406398 1 13.52990694 -7.06531255 0.990805937 1.05357604 0.313095709 0.984900918 0.036704696 0.055616383 0.111185599 0.023595623 0.015983679 8.60E-08 7.06531255 -0.740480331 down SLTS(ph)SLENIFSR ddPTM_A459_MK2206_30min_R2 4 SLTSSLENIFSR 12 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 SLTS(0.996)S(0.004)LENIFSR;SLTS(0.954)S(0.046)LENIFSR;SLT(0.109)S(0.818)S(0.073)LENIFSR;SLT(0.097)S(0.896)S(0.007)LENIFSR 221.86 2.38E-08 40318300 70208 75399 71796 93111 97860 129237 157094 140317 153002 178361 TRUE FALSE 75583.17846 71654.7953 74189.64281 85503.53345 94017.52469 134155.2046 136467.3691 158656.9137 166309.8374 172541.0952 0.438058993 0.415291182 0.42998245 0.4955546 0.544899316 0.777526099 0.790926758 0.919531162 0.96388537 1 17.39658049 -6.962362681 0.797523134 0.989525458 0.406524383 0.980862216 0.031103609 0.075830651 0.101551619 0.022206713 0.017440767 1.09E-07 6.962362681 -0.583001074 down SLTSS(ph)LENIFSR ddPTM_A459_MK2206_30min_R1 1 SLTSSLENIFSR 12 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 SLTS(0.035)S(0.965)LENIFSR 199.96 0.00010239 4204800 1445.3 1346.1 1487.2 1293 2056.4 2273.6 3528.8 3898.1 3455.4 3397.2 TRUE FALSE 1322.369645 1258.468645 1386.253008 1392.587084 1974.489234 2402.329267 3293.400191 3864.019323 3814.601195 3818.070784 0.346344979 0.329608516 0.363076822 0.364735795 0.517143171 0.629199772 0.862582277 1.012034491 0.999091272 1 11.89862813 -7.057786643 1.079200257 1.028548517 0.339864368 0.992884379 0.02380948 0.037403765 0.088604421 0.015191699 0.010329292 8.75E-08 7.057786643 -0.688684149 down SLTTECHLLDS(ph)PGLNCSNPFTQLER ddPTM_A459_MK2206_30min_R2 2 SLTTECHLLDSPGLNCSNPFTQLER 25 0 Q15398-1;Q15398 Q15398-1 DLGAP5 Disks large-associated protein 5 1 SLTTECHLLDS(0.999)PGLNCSNPFTQLER;SLTTECHLLDS(1)PGLNCSNPFTQLER 148.8 4.81E-10 10851100 39144 51818 37606 55878 53855 54414 47530 38607 40412 47876 TRUE FALSE 42140.89474 49244.79347 38859.76527 51312.58866 51740.3821 56484.7629 41289.25391 43653.06746 43926.96271 46313.81004 0.909899114 1.063285301 0.839053519 1.107932787 1.117169632 1.219609504 0.891510629 0.942549693 0.948463594 1 15.49915483 SLTVSDDAES(ph)SEPER ddPTM_A459_MK2206_30min_R1 1 SLTVSDDAESSEPER 15 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 SLTVSDDAES(0.756)S(0.244)EPER 212.55 7.28E-07 4748600 1854.3 1998.3 1907.3 1729.9 1915.8 1763.8 2045.5 1753.5 1730.2 1569.3 TRUE FALSE 1696.582048 1868.210307 1777.83779 1863.137198 1839.489629 1863.664832 1909.048427 1738.169334 1910.060482 1763.716732 0.961935677 1.059246235 1.008006421 1.056369861 1.042962056 1.056669021 1.082400815 0.985515022 1.082974634 1 10.78440315 -4.754005331 24.9695516 1.042323607 0.961935533 0.359845808 0.031850799 274.5711591 922153.5884 0.00733837 0.074636314 1.76E-05 4.754005331 -0.080388074 SLTVSDDAESS(ph)EPER ddPTM_A459_MK2206_30min_R1 2 SLTVSDDAESSEPER 15 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 SLTVSDDAES(0.001)S(0.999)EPER;SLTVSDDAES(0.001)S(0.999)EPER 297.03 2.08E-80 18118500 4553.6 4659.5 4445.4 4107 4599.3 4020.1 4425.8 4440.7 3556.8 3356.5 TRUE FALSE 4166.292408 4356.165703 4143.658634 4423.321852 4416.100142 4247.714588 4130.562957 4401.875428 3926.542088 3772.32856 1.104435189 1.15476837 1.098435242 1.172570676 1.170656286 1.126019253 1.094963732 1.166885481 1.040880195 1 11.88123962 -8.420207561 4.125854563 1.001226987 1.135898234 0.729113251 0.028635996 0.105347324 2.918100628 0.027343494 0.007178119 3.80E-09 8.420207561 0.134671247 SLTVSDDAESS(ph)EPER ddPTM_A459_MK2206_30min_R2 2 SLTVSDDAESSEPER 15 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 SLTVSDDAES(0.02)S(0.98)EPER;SLTVS(0.001)DDAES(0.209)S(0.79)EPER 294.26 1.34E-67 36894000 101722 115457 102882 133281 106102 105712 124911 100165 89263 101008 TRUE FALSE 109509.9145 109723.5733 106312.0345 122391.516 101935.9024 109734.9442 108510.0357 113256.9094 97026.93439 97712.11723 1.120740371 1.122926986 1.088012803 1.252572551 1.04322683 1.123043358 1.110507465 1.159087661 0.992987739 1 16.57624986 -8.269345997 24.79207988 0.996493836 1.126688136 0.516490014 0.05070246 455.1323788 1427097.197 0.043951611 0.012169507 5.38E-09 8.269345997 0.1301943 SLTWPPSGSPS(ph)HAGTTPPENGLSEHPCETEQINAK ddPTM_A459_MK2206_30min_R1 1 SLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAK 35 0 P23497-5;P23497-2;P23497-3;P23497;P23497-4;E9PHV6;P23497-7;P23497-6 P23497-5 SP100 Nuclear autoantigen Sp-100 1 S(0.039)LT(0.014)WPPS(0.064)GS(0.148)PS(0.344)HAGT(0.134)T(0.134)PPENGLS(0.12)EHPCET(0.002)EQINAK 40.717 0.02983 8817100 165.23 58.824 281.43 207.68 208.73 302.43 304.21 418.44 203.98 233.41 TRUE FALSE 151.1763208 54.99454691 262.3273157 223.6755496 200.4158421 319.5533252 283.916706 414.7816232 225.1844509 262.326593 0.57629049 0.209641525 1.000002755 0.852660598 0.763993615 1.218150709 1.082302418 1.581164984 0.858412593 1 8.035220256 -5.591153104 0.701613566 1.177968737 0.274143605 0.504936456 0.245785449 0.970977252 0.724372035 0.121696325 0.596566575 2.56E-06 5.591153104 -0.903825133 SLTWPPSGSPS(ph)HAGTTPPENGLSEHPCETEQINAK ddPTM_A459_MK2206_30min_R2 1 SLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAK 35 0 P23497-5;P23497-2;P23497-3;P23497;P23497-4;E9PHV6;P23497-7;P23497-6 P23497-5 SP100 Nuclear autoantigen Sp-100 1 S(0.126)LT(0.035)WPPS(0.112)GS(0.124)PS(0.453)HAGT(0.035)T(0.085)PPENGLS(0.029)EHPCETEQINAK 73.919 4.76E-06 6617100 10143 21700 15216 28474 22902 29444 25678 19115 21947 15790 TRUE FALSE 10919.55588 20622.40955 15723.29385 26147.58312 22002.75241 30564.51205 22306.44776 21613.39613 23855.91039 15274.77359 0.714875138 1.350095923 1.029363463 1.711814775 1.440463407 2.000979711 1.460345557 1.414973256 1.561784876 1 13.89886338 -4.497465713 0.9344972 1.530665743 1.97E-12 0.391221238 0.275791123 3.207064604 1.551308717 0.089950491 5.647653727 3.18E-05 4.497465713 -1.530665743 SLVESVS(ph)SSPNKESNEEEQVWHFLGK ddPTM_A459_MK2206_30min_R1 1 SLVESVSSSPNKESNEEEQVWHFLGK 26 1 Q9H2U2-4;Q9H2U2-6;Q9H2U2-3;Q9H2U2;Q9H2U2-2 Q9H2U2-4 PPA2 "Inorganic pyrophosphatase 2, mitochondrial" 1 S(0.061)LVES(0.111)VS(0.302)S(0.302)S(0.2)PNKES(0.024)NEEEQVWHFLGK 48.607 0.018148 86654000 2293.8 2755.9 2527.4 2248.5 2255.8 2000.3 2114.4 1871.7 2353.8 1855.1 TRUE FALSE 2098.700265 2576.490409 2355.84713 2421.67986 2165.946709 2113.555257 1973.352234 1855.335924 2598.485933 2084.923793 1.006607662 1.235771982 1.129944 1.161519604 1.038861332 1.013732619 0.946486505 0.889881889 1.24632178 1 11.02577894 -6.382206595 3.857283952 1.009237232 1.140439589 0.220672921 0.10111602 0.327726604 8.569387108 0.031699671 0.036212484 4.15E-07 6.382206595 0.131202357 SLVESVSS(ph)SPNKESNEEEQVWHFLGK ddPTM_A459_MK2206_30min_R1 1 SLVESVSSSPNKESNEEEQVWHFLGK 26 1 Q9H2U2-4;Q9H2U2-6;Q9H2U2-3;Q9H2U2;Q9H2U2-2 Q9H2U2-4 PPA2 "Inorganic pyrophosphatase 2, mitochondrial" 1 S(0.001)LVES(0.023)VS(0.03)S(0.497)S(0.44)PNKES(0.009)NEEEQVWHFLGK 60.464 0.003067 13734000 2007.4 2256.1 2223.8 2085.3 1752.7 1788.6 1576.3 1804.5 1966.5 1644.1 TRUE FALSE 1836.660089 2109.22748 2072.854652 2245.910167 1682.886248 1889.868986 1471.147903 1788.723447 2170.924712 1847.78352 0.993980122 1.141490579 1.121806007 1.215461737 0.91075942 1.022776189 0.796168971 0.968037342 1.174880438 1 10.85158003 -6.269932563 24.96164587 0.970242479 1.120107995 0.305886506 0.102385237 744.049974 2186774.485 0.032140765 0.037042191 5.37E-07 6.269932563 0.149865517 SLVGS(ph)WLK ddPTM_A459_MK2206_30min_R1 2 SLVGSWLK 8 0 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 SLVGS(1)WLK;SLVGS(1)WLK 102.06 0.016528 9691100 4686.1 4261.4 4762.2 3624.5 4595.4 4017.6 4223.3 3968.3 4473.4 3945.3 TRUE FALSE 4287.522587 3983.982085 4438.955132 3903.659618 4412.355487 4245.07304 3941.571363 3933.605571 4938.425938 4434.073549 0.96694891 0.898492558 1.001100925 0.880377733 0.995102007 0.957375423 0.888927826 0.887131331 1.113744705 1 12.11441699 -8.258847969 24.99989602 1.056872354 0.934924887 0.492635757 0.04970082 172.6373909 1665511.36 0.035828857 0.01206955 5.51E-09 8.258847969 -0.121947468 SLVGS(ph)WLK ddPTM_A459_MK2206_30min_R2 2 SLVGSWLK 8 0 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 SLVGS(1)WLK;S(0.002)LVGS(0.998)WLK 99.343 0.018728 6107100 46465 50119 38293 46331 47677 37711 45286 36531 37275 40554 TRUE FALSE 50022.39613 47630.16334 39569.66951 42545.60909 45804.96142 39146.11853 39339.8938 41305.72713 40517.11212 39230.7263 1.275082081 1.214103531 1.008639738 1.084497105 1.167578726 0.997843329 1.002782704 1.052892236 1.032790263 1 15.25969642 -1.522878748 0.541655372 1.030269325 12.1032333 0.679743358 0.053915733 78.33492068 0.736519843 0.028318708 1005.794122 0.03 1.522878748 11.07296397 SLVHEVGKPPQDVTDDS(ph)PPSK ddPTM_A459_MK2206_30min_R1 3 SLVHEVGKPPQDVTDDSPPSK 21 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 SLVHEVGKPPQDVT(0.013)DDS(0.98)PPS(0.007)K;SLVHEVGKPPQDVT(0.094)DDS(0.859)PPS(0.047)K;SLVHEVGKPPQDVT(0.008)DDS(0.95)PPS(0.042)K 126.29 3.64E-05 34807200 9290.2 6501 6542.6 5405.05 10178.3 9446.8 9108.4 8426.5 5314.97 4623.4 TRUE FALSE 8500.019705 6077.783718 6098.506541 5821.347888 9772.876758 9981.669652 8500.795255 8352.827999 5867.480151 5196.181697 1.635820339 1.169663432 1.173651519 1.120312612 1.880780413 1.920962398 1.635969593 1.607493442 1.12919072 1 12.34323616 -4.503213212 16.73481134 1.442902483 2.046843976 0.032676989 0.321004837 6279658.98 136945123.5 0.086089641 96952256.26 3.14E-05 4.503213212 0.603941493 SLVHEVGKPPQDVTDDS(ph)PPSK ddPTM_A459_MK2206_30min_R2 4 SLVHEVGKPPQDVTDDSPPSK 21 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 SLVHEVGKPPQDVT(0.369)DDS(0.551)PPS(0.08)K;SLVHEVGKPPQDVT(0.002)DDS(0.954)PPS(0.044)K;SLVHEVGKPPQDVT(0.003)DDS(0.964)PPS(0.033)K;SLVHEVGKPPQDVT(0.267)DDS(0.661)PPS(0.072)K 110.06 6.16E-05 55034400 279531 482375 388260 604119 602228 573318 605641 463815 528957 451529 TRUE FALSE 300932.1083 458420.9589 401204.3946 554760.5452 578581.5028 595136.0182 526119.6092 524437.213 574964.7237 436795.6457 0.688954002 1.049508995 0.918517386 1.270068854 1.324604557 1.362504467 1.204498292 1.200646614 1.316324303 1 18.73659895 -5.010812375 0.994542137 1.254290254 0.588518083 0.631342029 0.124330194 0.874380014 0.893616922 0.04161349 0.57504411 9.75E-06 5.010812375 -0.66577217 SLVQDSLSTNSSDLVAPS(ph)PDAFR ddPTM_A459_MK2206_30min_R1 1 SLVQDSLSTNSSDLVAPSPDAFR 23 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 SLVQDSLSTNSSDLVAPS(1)PDAFR 249.47 4.12E-45 9591200 6334 5371.5 4970.3 3867.1 4466.1 3899.8 3849.9 3829.5 3454.7 2830.3 TRUE FALSE 5795.260039 5021.814374 4632.929884 4164.944712 4288.20578 4120.603306 3593.080196 3796.019085 3813.828428 3180.938932 1.821870889 1.578720774 1.456466152 1.309344442 1.348094343 1.29540472 1.129565915 1.193364339 1.198963108 1 11.63523696 -1.522878745 0.272192049 1.074828188 6.36625513 0.941320379 0.054520207 11.40864785 0.159680803 0.063812766 28.43609321 0.03 1.522878745 5.291426942 SLYAS(ph)SPGGVYATR ddPTM_A459_MK2206_30min_R1 6 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SLYAS(0.5)S(0.5)PGGVYATR;SLYAS(0.93)S(0.07)PGGVYATR;SLYAS(0.5)S(0.5)PGGVYATR;SLYAS(0.84)S(0.159)PGGVYAT(0.001)R;SLYAS(0.929)S(0.071)PGGVYATR;SLYAS(0.5)S(0.5)PGGVYAT(0.001)R 252.46 1.15E-27 5787224700 18177.1 16966.8 16597.3 15023.5 17621.6 15144.5 17515.7 15559.9 14315.8 14174.5 TRUE FALSE 16631.04219 15862.25824 15470.72152 16180.61257 16919.69436 16001.9685 16347.25961 15423.86143 15803.97864 15930.54407 1.043972015 0.995713528 0.971135791 1.015697424 1.062091431 1.00448349 1.026158274 0.968194267 0.992055172 1 13.95950792 -7.754064323 24.99880217 0.985093538 1.015649136 0.237064035 0.024757441 255.8005527 867080.2452 0.012624663 0.007100709 1.76E-08 7.754064323 0.030555598 SLYAS(ph)SPGGVYATR ddPTM_A459_MK2206_30min_R2 4 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SLYAS(0.936)S(0.064)PGGVYATR;SLYAS(0.5)S(0.5)PGGVYATR;SLYAS(0.5)S(0.5)PGGVYATR;SLYAS(0.843)S(0.157)PGGVYATR 244 5.90E-20 2149431200 104253 161394 113938.4 139400 120892 113774 129503 103687.4 96549 126617 TRUE FALSE 112234.6898 153379.4086 117737.0494 128010.5741 116145.1726 118103.7493 112499.1005 117239.6992 104946.6575 122485.4977 0.916310028 1.252225052 0.961232567 1.045108005 0.948236117 0.96422639 0.918468739 0.957172085 0.856808843 1 16.90225142 -6.102075327 1.226468918 0.932309048 1.073657445 0.236897961 0.089024011 0.583531991 1.789474169 0.032381129 0.055358387 7.91E-07 6.102075327 0.141348398 SLYASS(ph)PGGVYATR ddPTM_A459_MK2206_30min_R1 2 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SLYAS(0.027)S(0.973)PGGVYATR;SLY(0.004)AS(0.116)S(0.879)PGGVYATR 198.81 8.92E-05 23083000 5322.9 4952.1 5321.2 5248.9 5057.3 5346.8 5199.6 5081.4 4594.4 4036.1 TRUE FALSE 4870.159403 4629.71739 4960.01177 5653.171187 4855.857032 5649.531195 4852.744171 5036.973856 5072.004321 4536.122539 1.073639295 1.020633228 1.093447482 1.246256277 1.0704863 1.245453831 1.069800062 1.110413974 1.118136531 1 12.1472439 -9.753117842 1.04645176 0.998343376 1.118450664 0.19787301 0.070277072 32.16652052 24.82933118 0.305302182 0.021628098 1.77E-10 9.753117842 0.120107287 SLYASS(ph)PGGVYATR ddPTM_A459_MK2206_30min_R2 2 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SLYAS(0.071)S(0.929)PGGVYATR;S(0.001)LYAS(0.23)S(0.769)PGGVYATR 214.47 1.17E-06 2074757000 96271 97799 89955 114889 106498 106132 102724 85700 86200 98577 TRUE FALSE 103641.5818 92942.44387 92954.0548 105502.2012 102316.3534 110170.9276 89236.21541 96901.28425 93697.52019 95360.44056 1.086840425 0.974643608 0.974765367 1.106351864 1.07294338 1.155310598 0.935778137 1.016158102 0.982561738 1 16.54110328 -7.291287289 24.98464387 0.984971013 1.0564214 0.32242095 0.055181513 1027.439702 860029.5553 0.02471368 0.016664173 5.11E-08 7.291287289 0.071450387 SLYASSPGGVYATR ddPTM_A459_MK2206_30min_R1 1 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 0 126.66 0.017726 12198000 773.36 793.96 712.7 797.24 853.99 685.91 772.69 549.34 693.72 629.86 FALSE TRUE 707.5816709 742.2730597 664.3239097 858.6435629 819.9737699 724.7456314 721.14526 544.5371783 765.8346765 707.891812 0.999561881 1.048568506 0.93845401 1.212958744 1.158332045 1.023808468 1.01872242 0.769237854 1.081852712 1 9.467385078 -7.533585622 24.98758965 0.934123188 1.064412315 0.189932044 0.10305759 319.1562813 744832.9418 0.048502642 0.028034773 2.93E-08 7.533585622 0.130289127 SLYGDVDS(ph)PLPTGEAGGPPSTR ddPTM_A459_MK2206_30min_R1 4 SLYGDVDSPLPTGEAGGPPSTR 22 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 SLYGDVDS(0.966)PLPT(0.034)GEAGGPPSTR;SLYGDVDS(0.934)PLPT(0.065)GEAGGPPSTR;SLYGDVDS(1)PLPTGEAGGPPSTR;SLYGDVDS(0.984)PLPT(0.015)GEAGGPPSTR 191.97 6.44E-27 17605100 4805.04 4942.51 4650.22 4439.64 5348.29 4840.18 4759.88 4474.67 3996.39 3889.4 TRUE FALSE 4396.346116 4620.751701 4334.576023 4781.581842 5135.256284 5114.226809 4442.35709 4435.548432 4411.829042 4371.248235 1.005741582 1.057078311 0.991610586 1.093871037 1.174780293 1.169969431 1.016267403 1.014709802 1.009283574 1 12.09382959 -7.480893893 24.90591936 1.010295648 1.082613797 0.286125674 0.055876549 703.9832325 417612.4128 0.026648077 0.017964174 3.30E-08 7.480893893 0.072318149 SLYGDVDS(ph)PLPTGEAGGPPSTR ddPTM_A459_MK2206_30min_R2 6 SLYGDVDSPLPTGEAGGPPSTR 22 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 SLYGDVDS(1)PLPTGEAGGPPSTR;S(0.001)LY(0.012)GDVDS(0.956)PLPT(0.032)GEAGGPPSTR;SLYGDVDS(1)PLPTGEAGGPPSTR;S(0.006)LY(0.004)GDVDS(0.968)PLPT(0.021)GEAGGPPS(0.001)T(0.001)R;SLYGDVDS(0.987)PLPT(0.009)GEAGGPPS(0.002)T(0.002)R;SLYGDVDS(0.997)PLPT(0.003)GEAGGPPSTR 173.03 3.06E-12 12385000 57429.5 73517.4 66602.9 74166.3 70210.3 68150.4 68483.4 53789.6 62534.4 58988.7 TRUE FALSE 61826.34668 69866.63282 68823.40744 68106.67604 67453.49084 70743.91123 59491.44732 60820.08541 67973.52908 57063.90355 1.083458068 1.224357755 1.206076051 1.193515897 1.182069341 1.239731368 1.042540794 1.065824131 1.191182601 1 15.80029082 -7.265006647 24.99922162 1.080372224 1.190620204 0.461784503 0.059779379 294.2078616 2061777.892 0.023579938 0.016623928 5.43E-08 7.265006647 0.11024798 SLYYYIQQDTK ddPTM_A459_MK2206_30min_R1 2 SLYYYIQQDTK 11 0 P07355;P07355-2;A6NMY6 P07355 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein 0 ; 184.36 0.00035469 32141000 6226.5 9420.4 7630 8396.9 7307 7982.8 6886.8 6626.4 5536.7 6197 FALSE TRUE 5696.903478 8807.130248 7112.096858 9043.630693 7015.946717 8434.779237 6427.394138 6568.466083 6112.259778 6964.731145 0.817964593 1.264532695 1.021158852 1.298489562 1.007353561 1.211070329 0.922848851 0.94310404 0.877601684 1 12.76585195 -7.281536091 24.08727534 0.931147272 1.111511064 0.269507075 0.134644024 635.814123 762062.2668 0.052277913 0.035303233 5.23E-08 7.281536091 0.180363792 SLYYYIQQDTK ddPTM_A459_MK2206_30min_R2 1 SLYYYIQQDTK 11 0 P07355;P07355-2;A6NMY6 P07355 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein 0 143.97 0.011013 6454800 17756 21466 19375 30397 20145 27549 25232 22428 25590 23416 FALSE TRUE 19115.41301 20400.02965 20020.95283 27913.46786 19354.00608 28597.3965 21919.00809 25359.41661 27815.77194 22651.93784 0.843875396 0.900586511 0.883851659 1.232277259 0.854408405 1.2624702 0.967643839 1.11952526 1.227964342 1 14.46734686 -5.708169439 13.76164928 1.091525184 0.878426378 0.400886249 0.122513151 1.429475352 367.4872151 0.031187353 0.054009156 1.96E-06 5.708169439 -0.213098805 SMAHS(ph)PGPVSQASPGTSSAVLFLSK ddPTM_A459_MK2206_30min_R2 2 SMAHSPGPVSQASPGTSSAVLFLSK 25 0 H0Y6Z4;Q8TDZ2-2;Q8TDZ2;Q8TDZ2-4 H0Y6Z4 MICAL1 Protein-methionine sulfoxide oxidase MICAL1 1 S(0.107)MAHS(0.878)PGPVS(0.012)QAS(0.002)PGTSSAVLFLSK;S(0.214)MAHS(0.748)PGPVS(0.004)QAS(0.029)PGTSS(0.005)AVLFLSK 79.04 0.00014928 13827800 48794 113830 84103 133397 123019 155243 114476 81461 118982 67708 TRUE FALSE 52529.70616 108177.3677 86906.95204 122498.0384 118188.6559 161150.8811 99445.16369 92108.2324 129330.8393 65498.69351 0.801996244 1.65159581 1.326850161 1.870236364 1.804442953 2.460367872 1.518277058 1.406260606 1.974556016 1 15.99917851 -5.749595946 22.11111425 1.762157009 1.299291197 0.201365889 0.410522147 87.69662833 163717.8536 0.110008605 0.18796209 1.78E-06 5.749595946 -0.462865812 SMDAMS(ph)SPTK ddPTM_A459_MK2206_30min_R1 1 SMDAMSSPTK 10 0 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 S(0.003)MDAMS(0.905)S(0.092)PTK 118.23 0.0057757 7173800 3983.7 4392.5 4131 2867.5 2975.3 3072.1 3785.2 3088.3 4560.5 5608.6 TRUE FALSE 3644.865396 4106.547452 3850.59923 3088.355347 2856.787501 3246.039647 3532.696214 3061.299319 5034.580295 6303.435711 0.578234722 0.651477645 0.610873087 0.489947941 0.453211174 0.514963553 0.560439795 0.485655674 0.798704155 1 12.62192267 -8.482355785 3.320507845 0.998142006 0.544392912 0.865892793 0.058615358 0.079305915 1.963578827 0.063870377 0.016940918 3.29E-09 8.482355785 -0.453749095 SMDAMS(ph)SPTKTETVK ddPTM_A459_MK2206_30min_R1 4 SMDAMSSPTKTETVK 15 1 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 SMDAMS(0.5)S(0.5)PTKTETVK;SMDAMS(0.648)S(0.349)PT(0.003)KTETVK;SMDAMS(0.942)S(0.058)PTKTETVK;SMDAMS(0.472)S(0.472)PT(0.051)KT(0.003)ET(0.002)VK 254.94 5.57E-28 51110000 17326.2 19200.7 18819.4 17466.4 15050.5 12981.4 14935.3 16951.5 17117.4 13964 TRUE FALSE 15852.51571 17950.73094 17541.99156 18811.66515 14451.00672 13716.39565 13938.99339 16803.29482 18896.81499 15693.96574 1.010102607 1.143798275 1.117753909 1.198655933 0.920800195 0.87399169 0.888175342 1.070685071 1.204081575 1 13.93792234 -6.265260425 24.99058817 0.985302687 1.119463168 0.269225868 0.100090535 474.4635967 3103111.022 0.033485845 0.039406179 5.43E-07 6.265260425 0.134160482 SMDAMSS(ph)PTK ddPTM_A459_MK2206_30min_R1 1 SMDAMSSPTK 10 0 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 SMDAMS(0.127)S(0.868)PT(0.005)K 84.687 0.03752 11522000 6732.2 7062 6652.9 5087.1 4994.6 4758.8 6447.5 5120.5 7981.1 9665.2 TRUE FALSE 6159.591038 6602.262516 6201.319684 5478.909323 4795.654506 5028.239144 6017.399039 5075.732008 8810.763906 10862.59794 0.567045846 0.607797743 0.570887343 0.504382962 0.4414832 0.462894712 0.553955791 0.467266858 0.811110192 1 13.40708156 -8.454646561 3.306585059 0.99731787 0.522563391 0.899910363 0.05287732 0.068199903 1.514021421 0.056947695 0.015132073 3.51E-09 8.454646561 -0.474754479 SMDAMSS(ph)PTK ddPTM_A459_MK2206_30min_R2 1 SMDAMSSPTK 10 0 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 SMDAMS(0.102)S(0.896)PT(0.002)K 99.343 0.016039 0 74962 61894 54997 55174 60584 43241 67772 65403 43608 66798 TRUE FALSE 80701.14836 58820.43396 56830.57253 50666.10771 58205.16775 44886.56656 58873.45499 73951.39666 47400.94501 64618.38673 1.248888319 0.910273947 0.879479904 0.784081904 0.900752413 0.69464078 0.911094473 1.144432729 0.733551972 1 15.97965711 -4.758941716 4.303927771 0.878619367 1.28469438 0.443939515 0.122788992 0.211643927 8.056861859 0.030682246 0.271824784 1.74E-05 4.758941716 0.406075014 SMDAMSS(ph)PTKTETVK ddPTM_A459_MK2206_30min_R2 3 SMDAMSSPTKTETVK 15 1 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 SMDAMS(0.024)S(0.923)PT(0.018)KT(0.031)ET(0.003)VK;SMDAMS(0.141)S(0.859)PTKTETVK;SMDAMS(0.008)S(0.98)PT(0.009)KT(0.001)ET(0.002)VK 117.2 0.0075411 156520000 133515.4 165529.3 138705.4 137393.6 143856 108994.4 155122.9 106722 121154.3 141742.9 TRUE FALSE 143737.4417 157309.3557 143329.7688 126168.1034 138207.4906 113142.2583 134755.0769 120670.9318 131692.082 137117.8408 1.048276729 1.147256657 1.045303572 0.920143598 1.007946813 0.825146149 0.98276837 0.880052743 0.960429958 1 17.06505677 -5.630333239 3.791800367 0.934291152 1.09821953 0.565142474 0.057486396 0.142161469 3.84108997 0.014969056 0.027516331 2.34E-06 5.630333239 0.163928378 SMDFEEAER ddPTM_A459_MK2206_30min_R1 1 SMDFEEAER 9 0 O43396;K7ER96 O43396 TXNL1 Thioredoxin-like protein 1 0 141.48 0.030512 8327100 3038.4 3002.2 2862.2 2827.9 3433.6 3153.8 3437.1 3086.9 2707.2 2490.2 FALSE TRUE 2779.968125 2806.756234 2667.921839 3045.705348 3296.832441 3332.365431 3207.81733 3059.911559 2988.623128 2798.704776 0.993305242 1.002876852 0.953270192 1.088255315 1.17798507 1.190681296 1.146179246 1.09333131 1.067859373 1 11.4505436 -5.887182244 4.977506657 1.123690729 0.985947829 0.53284835 0.053732862 0.153727521 6.064545988 0.015669643 0.023753451 1.30E-06 5.887182244 -0.137742901 SMDFEEAER ddPTM_A459_MK2206_30min_R2 2 SMDFEEAER 9 0 O43396;K7ER96 O43396 TXNL1 Thioredoxin-like protein 1 0 ; 150.36 0.018392 13767700 50754 59223 59199 75180 65623 68382 71640 51497 53846 64227 FALSE TRUE 54639.76526 56282.07194 61172.66511 69037.55351 63046.31129 70984.32493 62233.58194 58227.83472 58529.42775 62131.27825 0.879424451 0.9058573 0.984571167 1.111156175 1.014727414 1.14248937 1.001646573 0.93717426 0.942028386 1 15.92303212 -5.311282811 3.354686218 1.023878985 0.887900838 0.405074829 0.061304068 0.247328785 5.590129351 0.017947892 0.046140113 4.88E-06 5.311282811 -0.135978147 SMDSSDLS(ph)DGAVTLQEYLELKK ddPTM_A459_MK2206_30min_R1 1 SMDSSDLSDGAVTLQEYLELKK 22 1 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QLH1 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 S(0.176)MDS(0.261)S(0.261)DLS(0.302)DGAVTLQEYLELKK 109.66 3.62E-05 8372700 2016.9 1760.9 2267 1880 1908.4 1213 1747.7 1571.7 1893 1835 TRUE FALSE 1845.352064 1646.26509 2113.122356 2024.797926 1832.384387 1281.679012 1631.114122 1557.958793 2089.784124 2062.333654 0.894788319 0.798253516 1.024626812 0.981799391 0.888500454 0.62147025 0.790906999 0.755434888 1.013310393 1 11.01006204 -6.536196648 24.98757958 0.811093352 0.924474056 0.089974969 0.120900523 435.3102112 816740.9017 0.040045868 0.040066161 2.91E-07 6.536196648 0.113380705 SMEAEMIQLQEELAAAER ddPTM_A459_MK2206_30min_R1 2 SMEAEMIQLQEELAAAER 18 0 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 ; 194.77 3.83E-09 17480300 1557.13 1891.72 2153.4 2064.8 2296.67 1889.1 1386.92 1705.63 1465.35 1565.38 FALSE TRUE 1424.687917 1768.568684 2007.233208 2223.831254 2205.188771 1996.059209 1294.401097 1690.717857 1617.678376 1759.311092 0.809798746 1.005262055 1.140919998 1.26403526 1.253438792 1.134568649 0.735743157 0.961011309 0.919495354 1 10.7807949 -7.232505541 24.69064981 0.900813375 1.113078509 0.32938981 0.137254479 738.0899706 629848.6958 0.056942912 0.044099743 5.85E-08 7.232505541 0.212265135 SMESS(ph)PR ddPTM_A459_MK2206_30min_R2 3 SMESSPR 7 0 Q1ED39;H3BPL4 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 SMES(0.026)S(0.974)PR;SMES(0.084)S(0.916)PR;S(0.001)MES(0.089)S(0.91)PR 87.696 0.033251 150417900 676933 562488 607983 653007 775521 658675 767370 807711 868100 794103 TRUE FALSE 728759.511 534555.6639 628252.8498 599654.2392 745070.1489 683741.3387 666613.3972 913281.601 943605.7688 768191.4841 0.948669083 0.695862522 0.817833656 0.780605164 0.969901599 0.890066283 0.867769835 1.188872332 1.228347083 1 19.55110645 -7.744883946 9.280678968 1.156612664 0.848464355 0.664075924 0.092966091 0.115353767 57.90050106 0.04553266 0.025321765 1.80E-08 7.744883946 -0.308148309 SMEVLS(ph)VTDGGSPVPAR ddPTM_A459_MK2206_30min_R2 1 SMEVLSVTDGGSPVPAR 17 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 S(0.002)MEVLS(0.702)VT(0.117)DGGS(0.179)PVPAR 99.711 0.017748 3163300 15498 18212 15885 19436 15625 17866 17200 14141 14187 19670 TRUE FALSE 16684.5388 17307.61856 16414.59797 17848.01663 15011.48399 18545.90315 14941.61934 15989.27725 15420.95962 19028.16951 0.876833622 0.909578746 0.862647243 0.937978644 0.788908464 0.974655136 0.785236821 0.840295082 0.810427908 1 14.21584916 -6.223130421 24.99091092 0.859937757 0.895238602 0.03703371 0.070479258 1819.334588 1186845.126 0.019655216 0.025374107 5.98E-07 6.223130421 0.035300845 SMEVLSVTDGGS(ph)PVPAR ddPTM_A459_MK2206_30min_R1 1 SMEVLSVTDGGSPVPAR 17 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 SMEVLSVTDGGS(0.999)PVPAR 169.02 1.08E-06 10631000 2763.2 1679.1 2324.8 1672.4 2923.2 3168.1 3318.6 2227.2 1707.5 2172.7 TRUE FALSE 2528.17533 1569.790285 2166.999053 1801.208538 2806.762754 3347.475084 3097.222249 2207.727825 1885.000735 2441.870479 1.035343746 0.642863861 0.887434068 0.737634757 1.149431462 1.370865127 1.268381053 0.904113402 0.771949516 1 11.25377096 -6.264803182 24.96475107 1.096879068 0.817151942 0.300003081 0.186711809 365.2097282 2710432.926 0.06173458 0.072857836 5.43E-07 6.264803182 -0.279727126 SMEVLSVTDGGS(ph)PVPAR ddPTM_A459_MK2206_30min_R2 1 SMEVLSVTDGGSPVPAR 17 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 SMEVLS(0.085)VT(0.265)DGGS(0.65)PVPAR 78.228 0.01902 4263800 23812 24243 24274 22180 27323 21676 34861 18208 28268 28219 TRUE FALSE 25635.06503 23039.12787 25083.28304 20367.82305 26250.16173 22500.89537 30283.70882 20587.84812 30726.69954 27298.21634 0.939074726 0.84397924 0.918861611 0.746122853 0.961607213 0.824262475 1.109365844 0.754182906 1.125593671 1 14.73651907 -7.22224657 24.99950974 0.976801051 0.871467965 0.224796874 0.111106718 897.4066679 572420.0908 0.039283871 0.030433903 5.99E-08 7.22224657 -0.105333085 SMFGS(ph)LDPPNMPQALPK ddPTM_A459_MK2206_30min_R1 1 SMFGSLDPPNMPQALPK 17 0 Q99570 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 1 S(0.001)MFGS(0.999)LDPPNMPQALPK 169.64 9.83E-07 6617500 2640.5 2775.2 2964.1 2494.8 2826.2 2577.4 2945.5 2467.5 2445.4 2346.9 TRUE FALSE 2415.911609 2594.533976 2762.90515 2686.949928 2713.626469 2723.330161 2749.011069 2445.926908 2699.608081 2637.65169 0.915932766 0.983652991 1.047486733 1.0186902 1.028803947 1.03248286 1.042219137 0.92731232 1.023489224 1 11.36503835 -4.84389211 3.318903922 1.014783359 0.909138531 0.465133661 0.032213309 0.256559607 4.644025516 0.008445813 0.063683764 1.43E-05 4.84389211 -0.105644829 SMFGS(ph)LDPPNMPQALPK ddPTM_A459_MK2206_30min_R2 1 SMFGSLDPPNMPQALPK 17 0 Q99570 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 1 SMFGS(1)LDPPNMPQALPK 164.41 6.01E-06 2756300 33040 43060 36726 47992 42265 41998 40188 33515 30963 35214 TRUE FALSE 35569.5678 40921.70302 37950.42651 44070.90008 40605.46374 43596.26332 34911.26733 37895.52557 33656.10577 34064.97006 1.044168474 1.201283986 1.114060175 1.293730774 1.19200057 1.279797494 1.024843623 1.112448521 0.987997515 1 15.05600132 -7.280610457 24.70688379 1.040693105 1.189827271 0.510285255 0.074710444 629.1238063 810785.0464 0.030983734 0.020928825 5.24E-08 7.280610457 0.149134165 SMGS(ph)QEDDSGNKPSSYS ddPTM_A459_MK2206_30min_R2 1 SMGSQEDDSGNKPSSYS 17 1 Q9UNS2;Q9UNS2-2;H7C3P9 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 1 SMGS(0.996)QEDDSGNKPSS(0.002)YS(0.001) 137.81 0.0024234 7354600 24236 25564 25801 31767 31627 22493 27328 21752 21479 30872 TRUE FALSE 26091.52679 24294.52893 26661.19246 29171.53448 30385.16507 23348.98688 23739.80077 24595.06109 23347.20459 29864.64917 0.873659243 0.81348784 0.892734159 0.976791467 1.017429165 0.781826927 0.794913097 0.82355098 0.781767248 1 14.86615115 -6.794014432 24.99999707 0.822789926 0.911406811 0.18728032 0.079006046 305.4481323 234416.6051 0.028585362 0.025211706 1.61E-07 6.794014432 0.088616885 SMGSQEDDSGNKPSS(ph)YS ddPTM_A459_MK2206_30min_R1 1 SMGSQEDDSGNKPSSYS 17 1 Q9UNS2;Q9UNS2-2;H7C3P9 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 1 SMGSQEDDSGNKPS(0.056)S(0.537)YS(0.407) 128.79 0.0046903 10938000 2491.6 2750.3 2282.6 2124.2 2033.6 1929.2 2142.3 1921 2090 1948.6 TRUE FALSE 2279.676336 2571.25497 2127.663472 2287.806252 1952.597406 2038.429637 1999.391076 1904.2049 2307.262979 2190.007279 1.040944639 1.174085125 0.971532603 1.044656917 0.891594025 0.930786695 0.912960927 0.869497064 1.053541238 1 11.09671995 -5.673310108 1.501843289 0.937432966 1.103761085 0.409465124 0.067687434 0.359520712 1.607333214 0.020730278 0.053271401 2.12E-06 5.673310108 0.166328119 SMGSQEDDSGNKPSS(ph)YS ddPTM_A459_MK2206_30min_R2 1 SMGSQEDDSGNKPSSYS 17 1 Q9UNS2;Q9UNS2-2;H7C3P9 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 1 SMGSQEDDSGNKPS(0.048)S(0.624)YS(0.327) 127.01 0.0053427 16100000 43908 47441 40978 47377 52202 42967 56465 39206 38686 47806 TRUE FALSE 47269.63024 45085.14893 42344.18607 43506.14755 50152.28719 44602.13929 49051.07767 44330.35881 42050.83835 46246.09414 1.022132379 0.974896362 0.915627295 0.940752908 1.084465361 0.964452028 1.060653415 0.958575197 0.909284106 1 15.4970439 -4.757289135 23.82018366 0.979707693 1.02213249 0.054541548 0.054059114 251.0511058 1440534.255 0.013838945 0.102298358 1.75E-05 4.757289135 0.042424797 SMGSQEDDSGNKPSSYS(ph) ddPTM_A459_MK2206_30min_R1 1 SMGSQEDDSGNKPSSYS 17 1 Q9UNS2;Q9UNS2-2;H7C3P9 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 1 SMGSQEDDSGNKPS(0.049)S(0.246)YS(0.705) 154.31 0.0004217 13102000 3051.8 2857.1 3015.2 2509.1 2581.8 2384.2 2586.1 2727.5 2026 2097.9 TRUE FALSE 2792.228384 2671.102271 2810.536625 2702.351317 2478.961439 2519.191344 2413.585988 2703.653755 2236.60995 2357.80369 1.18424973 1.132877297 1.192014686 1.146130752 1.051385851 1.0684483 1.023658584 1.146683147 0.948598884 1 11.20322789 -6.348970786 0.415483159 1.003130029 1.211119152 0.6024708 0.049621348 1.247668896 0.395958161 0.047777692 0.112259858 4.48E-07 6.348970786 0.207989123 SMGTGDTPGLEVPS(ph)SPLR ddPTM_A459_MK2206_30min_R1 3 SMGTGDTPGLEVPSSPLR 18 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.5)S(0.5)PLR;SMGTGDTPGLEVPS(0.5)S(0.5)PLR;SMGTGDTPGLEVPS(0.782)S(0.218)PLR 158.45 6.90E-05 42599000 7289.3 5846.8 6761.8 5408.4 6138.5 6132.2 6964.1 6350.8 5552.9 4880.7 TRUE FALSE 6669.306757 5466.172257 6302.827855 5824.955905 5893.990547 6479.399865 6499.537596 6295.275625 6130.143826 5485.357963 1.215838019 0.996502378 1.149027629 1.061909896 1.074495153 1.181217326 1.184888505 1.147650831 1.117546725 1 12.42137006 SMGTGDTPGLEVPS(ph)SPLR ddPTM_A459_MK2206_30min_R2 1 SMGTGDTPGLEVPSSPLR 18 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.5)S(0.5)PLR 119.51 0.003694 6035600 32377 33359 32455 38176 35010 34881 39635 31062 25983 32803 TRUE FALSE 34855.80801 31702.44057 33537.0335 35056.89868 33635.33149 36208.4209 34430.87689 35121.91005 28242.95437 31732.6408 1.098421283 0.999048291 1.056862356 1.104758312 1.059960049 1.141046569 1.085030304 1.106807034 0.89002849 1 14.95367997 -8.254057778 24.9906052 0.945014242 1.080083618 0.611069609 0.043540767 336.2032604 1138234.518 0.030846152 0.011127568 5.57E-09 8.254057778 0.135069377 SMGTGDTPGLEVPS(ph)SPLRK ddPTM_A459_MK2206_30min_R1 8 SMGTGDTPGLEVPSSPLRK 19 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.561)S(0.439)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK 156.58 1.62E-06 173227700 22986.2 22606.6 23208.9 20950 22850.3 19843 21838.3 21978.9 19440.4 16872.34 TRUE FALSE 21031.10298 21134.90623 21633.54453 22563.57263 21940.12416 20966.49351 20381.50685 21786.74079 21461.29915 18962.61286 1.109082548 1.114556648 1.140852513 1.189897869 1.157020097 1.105675345 1.074825869 1.148931371 1.131769093 1 14.21087015 -10.5006536 6.66445455 0.99999998 1.130870405 0.626374683 0.030184975 9.99E-09 1.52E-09 0.032281579 0.007829432 3.16E-11 10.5006536 0.130870425 SMGTGDTPGLEVPS(ph)SPLRK ddPTM_A459_MK2206_30min_R2 9 SMGTGDTPGLEVPSSPLRK 19 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.62)S(0.38)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.775)S(0.225)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.574)S(0.426)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK 163.4 3.52E-07 687187000 679714 841903 758893 827443 839653 733921 863110 657796 701734 784757 TRUE FALSE 731753.4265 800095.3213 784194.1139 759838.26 806684.0043 761850.8779 749782.6202 743772.1958 762769.5549 759150.4434 0.963910952 1.05393513 1.032989074 1.000906035 1.062614152 1.00355718 0.987660123 0.979742819 1.004767318 1 19.53402629 -6.989392296 24.89016649 0.991962202 1.024853382 0.220470072 0.026498428 277.9651819 652221.3306 0.008972636 0.007906316 1.02E-07 6.989392296 0.032891181 SMGTGDTPGLEVPSS(ph)PLR ddPTM_A459_MK2206_30min_R1 6 SMGTGDTPGLEVPSSPLR 18 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.047)S(0.953)PLR;SMGTGDTPGLEVPS(0.035)S(0.965)PLR;SMGTGDTPGLEVPS(0.021)S(0.979)PLR;SMGTGDTPGLEVPS(0.028)S(0.972)PLR;SMGTGDTPGLEVPS(0.023)S(0.977)PLR;SMGTGDTPGLEVPS(0.004)S(0.996)PLR 352.64 8.14E-184 286687600 21434.6 20693.8 20811 16778.3 22511.6 19540.9 21063.1 19096.1 17491.6 17638.8 TRUE FALSE 19611.47471 19346.62986 19398.4073 18070.56757 21614.9153 20647.28887 19658.01903 18929.14481 19309.91441 19824.02771 0.989278011 0.975918221 0.978530074 0.911548745 1.09033924 1.041528451 0.991625885 0.954858674 0.974066153 1 14.27496249 -3.126496533 9.55420167 0.990761935 0.457026811 0 0.045600051 0 0 0.011011112 0 0.000747315 3.126496533 -0.533735124 SMGTGDTPGLEVPSS(ph)PLR ddPTM_A459_MK2206_30min_R2 9 SMGTGDTPGLEVPSSPLR 18 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.041)S(0.959)PLR;SMGTGDTPGLEVPS(0.065)S(0.935)PLR;SMGTGDTPGLEVPS(0.049)S(0.951)PLR;SMGTGDTPGLEVPS(0.085)S(0.915)PLR;SMGTGDTPGLEVPS(0.231)S(0.769)PLR;SMGTGDTPGLEVPS(0.172)S(0.828)PLR;SMGTGDTPGLEVPS(0.025)S(0.975)PLR;SMGTGDTPGLEVPS(0.044)S(0.956)PLR;SMGTGDTPGLEVPS(0.229)S(0.771)PLR 300.87 1.18E-95 182606800 406613 434027 382359 470911 457414 435594 501609 381854 390503 417698 TRUE FALSE 437743.6039 412473.8503 395106.6582 432436.0649 439453.628 452170.8349 435747.1358 431763.6289 424468.2451 404068.5485 1.083339957 1.020801673 0.977820867 1.070204713 1.087571972 1.119044867 1.078399042 1.06854055 1.050485732 1 18.62424054 -4.435056015 20.52968301 1.056597981 2.783090285 0.041273153 0.040484511 1015.680826 233896.5447 0.010669618 1214.245336 3.67E-05 4.435056015 1.726492304 SMGTGDTPGLEVPSS(ph)PLRK ddPTM_A459_MK2206_30min_R1 2 SMGTGDTPGLEVPSSPLRK 19 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.174)S(0.826)PLRK;SMGTGDTPGLEVPS(0.226)S(0.774)PLRK 281.96 1.65E-71 405330000 7048.2 6247.4 6744.9 5804 6814.2 5972.7 6001.2 5928.4 5488.7 4897.7 TRUE FALSE 6448.713578 5840.693124 6287.07498 6251.025086 6542.775985 6310.869112 5600.870898 5876.568624 6059.270007 5504.464052 1.1715425 1.061082981 1.142177498 1.135628288 1.188630886 1.146500196 1.017514302 1.067600509 1.100792003 1 12.42638639 -7.24997319 24.62286113 1.052110079 1.139282127 0.567812671 0.040233302 493.9872755 1060805.496 0.015747265 0.012088825 5.62E-08 7.24997319 0.087172048 SMGTGDTPGLEVPSS(ph)PLRK ddPTM_A459_MK2206_30min_R2 2 SMGTGDTPGLEVPSSPLRK 19 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.204)S(0.796)PLRK;SMGTGDTPGLEVPS(0.052)S(0.948)PLRK 187.52 1.30E-15 193290000 141265 168306 142877 160168 173459 156743 167938 125520 130397 140423 TRUE FALSE 152080.357 159948.1688 147640.4479 147081.762 166648.1281 162707.9647 145887.5389 141925.895 141738.6954 135841.009 1.119546727 1.177465995 1.086862126 1.082749334 1.226788061 1.197782363 1.073958004 1.044794175 1.043416096 1 17.05155955 -7.477922433 4.425581845 1.036272631 1.147502944 0.594763206 0.044621044 0.170401083 7.322374217 0.021999251 0.013787614 3.33E-08 7.477922433 0.111230313 SMGYDDLDY(ph)GMMSDYGTAR ddPTM_A459_MK2206_30min_R1 1 SMGYDDLDYGMMSDYGTAR 19 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 S(0.237)MGYDDLDY(0.496)GMMS(0.247)DY(0.014)GT(0.007)AR 108.32 0.031261 15627000 3088.1 2729.9 2586.7 1824 2448.4 2733.1 2985.5 2599.3 2706.9 2078 TRUE FALSE 2825.440879 2552.183014 2411.122011 1964.484796 2350.875043 2887.84576 2786.342742 2576.574594 2988.291942 2335.438328 1.209811813 1.092806855 1.032406629 0.841163208 1.006609772 1.236532657 1.193070572 1.103250967 1.279542219 1 11.18947763 -6.750409311 24.99937808 1.170844427 1.028598396 0.240653987 0.110892675 302.5333938 685683.6164 0.038162804 0.037814575 1.78E-07 6.750409311 -0.142246031 SMGYDDLDYGMMS(ph)DYGTAR ddPTM_A459_MK2206_30min_R1 1 SMGYDDLDYGMMSDYGTAR 19 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 S(0.095)MGYDDLDY(0.099)GMMS(0.754)DY(0.037)GT(0.015)AR 105.25 0.0033059 14078000 1396.7 1283.9 914.38 718.18 1445.6 1223.7 1307.6 982.08 934.23 1036.9 TRUE FALSE 1277.903331 1200.317877 852.3144332 773.494348 1388.018691 1292.984836 1220.37239 973.4937781 1031.346552 1165.359 1.096574816 1.029998375 0.731374995 0.663739112 1.19106532 1.109516326 1.047207247 0.835359557 0.885003292 1 10.18655874 -5.011888698 24.14962712 0.933268618 1.079930865 0.108033053 0.155099136 846.2720622 1719080.968 0.04319292 0.13080242 9.73E-06 5.011888698 0.146662247 SMIIDRR ddPTM_A459_MK2206_30min_R2 1 SMIIDRR 7 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 95.793 0.031878 3807700 11645 24515 20787 27173 27840 27632 25084 18339 28865 20720 FALSE TRUE 12536.55015 23297.62075 21480.02821 24952.87898 26746.86172 28683.55512 21790.44067 20735.97027 31375.62552 20043.9081 0.625454382 1.162329254 1.071648707 1.244910866 1.334413508 1.431036053 1.087135331 1.034527307 1.565344711 1 14.29087621 -4.499652686 1.611792699 1.235175832 8.25E-18 0.507835444 0.174035512 1.886260383 2.661716077 0.04744711 4.548627585 3.16E-05 4.499652686 -1.235175832 SMMS(ph)PMADR ddPTM_A459_MK2206_30min_R1 2 SMMSPMADR 9 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 SMMS(1)PMADR;S(0.012)MMS(0.988)PMADR 118.23 0.0072794 10599300 3949.1 3712.8 3196.7 2977.3 4270.3 3600.1 3606.9 3840.8 3084.7 2844.7 TRUE FALSE 3613.208307 3471.096045 2979.716911 3206.612162 4100.204908 3803.934551 3366.290282 3807.220291 3405.365604 3197.122912 1.130143697 1.08569365 0.931999486 1.002968059 1.282467087 1.189799284 1.052912376 1.190827001 1.065134403 1 11.64255849 -3.993951748 3.745232719 1.095903339 4.46656982 0.010702444 0.100122727 2791.978532 382.3060334 0.027078764 78774.14024 0.000101402 3.993951748 3.370666481 SMMS(ph)PMADR ddPTM_A459_MK2206_30min_R2 2 SMMSPMADR 9 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 SMMS(1)PMADR;SMMS(1)PMADR 139.15 0.0024046 11318300 22142 26072 24477 33198 33960 30401 30058 21329.4 25191 29573 TRUE FALSE 23837.20854 24777.30239 25293.05096 30485.6172 32626.55976 31557.93136 26111.34849 24117.22581 27382.06765 28608.03543 0.833234725 0.866095907 0.884124009 1.065631273 1.140468378 1.103114243 0.912727774 0.843022789 0.957146034 1 14.80413281 -5.63241307 5.939624751 1.002379336 0.855941319 0.382054297 0.083332192 0.258866412 12.50262422 0.026962164 0.047224018 2.33E-06 5.63241307 -0.146438017 SMMS(ph)PMAER ddPTM_A459_MK2206_30min_R1 1 SMMSPMAER 9 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 S(0.01)MMS(0.99)PMAER 94.767 0.022974 9267500 1006.9 904.65 662.61 740.27 1181.2 811.98 911.27 833.8 819.54 831.14 TRUE FALSE 921.2578676 845.7571206 617.6338793 797.2857237 1134.150303 857.9536059 850.480841 826.5101745 904.7341158 934.107898 0.986243527 0.905416946 0.66120186 0.85352637 1.214153424 0.918473773 0.910473879 0.884812318 0.968554187 1 9.867445394 -6.038181733 24.96547278 0.975947389 0.839894125 0.236894117 0.114417312 821.5420515 537171.3474 0.03545395 0.045781814 9.16E-07 6.038181733 -0.136053264 SMMS(ph)PMAER ddPTM_A459_MK2206_30min_R2 1 SMMSPMAER 9 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 SMMS(1)PMAER 109.16 0.011594 8254400 18601 27095 26403 19896 18716 30765 25473 15112 16515 22908 TRUE FALSE 20025.10686 25749.5017 27283.26284 18270.43316 17981.1158 31935.78363 22128.3645 17087.19029 17951.44485 22160.51384 0.903639104 1.161954181 1.231165624 0.824458913 0.811403379 1.441112055 0.998549251 0.771064715 0.810064468 1 14.43570371 -7.594194041 6.636809895 0.847372275 1.065633159 0.184259707 0.189062688 0.354392919 26.26342424 0.092868916 0.05315109 2.55E-08 7.594194041 0.218260884 SMPESLDS(ph)PTSGRPGVTSLTAAAAFKPVGSTGVIK ddPTM_A459_MK2206_30min_R1 1 SMPESLDSPTSGRPGVTSLTAAAAFKPVGSTGVIK 35 2 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 S(0.002)MPES(0.052)LDS(0.279)PT(0.279)S(0.279)GRPGVT(0.036)S(0.036)LT(0.036)AAAAFKPVGSTGVIK 53.876 0.00034174 34390000 2381.4 2545.7 2110.9 2159.7 1768.7 1666.3 1901.8 1931.8 1504.1 1747.9 TRUE FALSE 2178.849425 2379.974467 1967.617989 2326.040468 1698.248934 1760.644466 1774.934392 1914.910476 1660.456577 1964.443048 1.109143595 1.211526325 1.001616204 1.184071216 0.86449385 0.896256304 0.903530593 0.974785438 0.845255646 1 10.93990463 -6.263644319 24.99998439 0.911376887 1.123729614 0.705565687 0.067237457 104.6024947 1186000.03 0.019493614 0.023175518 5.45E-07 6.263644319 0.212352727 SMPESLDSPTS(ph)GRPGVTSLTAAAAFKPVGSTGVIK ddPTM_A459_MK2206_30min_R1 1 SMPESLDSPTSGRPGVTSLTAAAAFKPVGSTGVIK 35 2 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 SMPES(0.025)LDS(0.17)PT(0.17)S(0.568)GRPGVT(0.022)S(0.022)LT(0.022)AAAAFKPVGSTGVIK 69.756 2.04E-05 23974000 3947.5 3615.8 3744.3 3066.4 3639.2 2999 3224.3 2617.7 3089.9 3067.9 TRUE FALSE 3611.744396 3380.410763 3490.147348 3302.574659 3494.242958 3168.800788 3009.21283 2594.813725 3411.106162 3447.974613 1.047497386 0.980404771 1.012231162 0.957830329 1.013418992 0.919032517 0.872747966 0.752561726 0.989307215 1 11.75153344 -6.897449302 3.773022279 0.884129618 0.999170783 0.312413332 0.068447225 0.240647389 6.530206397 0.024438922 0.021311457 1.27E-07 6.897449302 0.115041164 SMPWNVDTLSKDGFSKS(ph)MVNTKPEK ddPTM_A459_MK2206_30min_R1 1 SMPWNVDTLSKDGFSKSMVNTKPEK 25 3 Q16543;K7EQA9 Q16543 CDC37 "Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed" 1 S(0.021)MPWNVDT(0.113)LS(0.021)KDGFS(0.025)KS(0.818)MVNT(0.002)KPEK 48.229 0.016307 1685000 272.29 0 178.88 214.51 184.83 131.46 165.44 210.93 67.797 212.82 TRUE FALSE 249.1303056 0 166.738124 231.0315974 177.4678297 138.9031516 154.4037995 209.0858612 74.84474076 239.1857483 1.041576714 0 0.69710727 0.965908709 0.741966572 0.580733395 0.645539296 0.874156854 0.312914717 1 7.90198762 -11.59371526 2.392979567 1.517623494 0.649562432 0.113562892 0.292405291 45763507.55 14890614.31 129281992.1 0.073396129 2.55E-12 11.59371526 -0.868061062 SMS(ph)AAFCSLLAPER ddPTM_A459_MK2206_30min_R1 2 SMSAAFCSLLAPER 14 0 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 1 S(0.197)MS(0.789)AAFCS(0.014)LLAPER;S(0.11)MS(0.781)AAFCS(0.109)LLAPER 200.97 6.41E-05 104333000 2023.79 2436.11 2290.69 2187.72 2548.41 2192.45 2318.25 2012.45 1761.21 1715.48 TRUE FALSE 1851.656033 2277.518796 2135.204345 2356.218573 2446.901433 2316.584624 2163.603772 1994.855362 1944.294082 1928.006614 0.960399212 1.181281631 1.107467334 1.222100877 1.269135394 1.20154392 1.122197277 1.034672468 1.008447828 1 10.91289429 -7.728130052 2.813279449 1.008668062 1.163882559 0.40111898 0.078145743 0.278612399 4.449412154 0.049128727 0.02302082 1.87E-08 7.728130052 0.155214498 SMS(ph)AAFCSLLAPER ddPTM_A459_MK2206_30min_R2 1 SMSAAFCSLLAPER 14 0 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 1 S(0.018)MS(0.98)AAFCS(0.002)LLAPER 97.223 0.042663 2020200 11101 16420 14701 12673 16576 17339 14235 11774 14642 12287 TRUE FALSE 11950.9011 15604.60668 15191.124 11637.57536 15925.14295 17998.8478 12365.9274 13312.90223 15915.53469 11886.0762 1.005453852 1.312847606 1.278060459 0.979093114 1.339814981 1.514280028 1.040370867 1.120041804 1.339006618 1 13.53698491 -10.94468132 3.170810442 0.996822889 1.216806378 0.131287095 0.165287908 39285474.32 46149973.5 1106911.354 0.042285258 1.14E-11 10.94468132 0.219983489 SMS(ph)APSDLEMIGNEDLEFTR ddPTM_A459_MK2206_30min_R1 2 SMSAPSDLEMIGNEDLEFTR 20 0 F8VWT9;J3KPF0;Q9Y4D8-2;Q9Y4D8-4;Q9Y4D8 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 S(0.01)MS(0.99)APSDLEMIGNEDLEFTR;S(0.006)MS(0.605)APS(0.39)DLEMIGNEDLEFTR 277.07 9.54E-72 10233000 3630.9 3002.2 3504 3185.3 3984.5 2756.7 2777 3496.4 2515.8 2669.8 TRUE FALSE 3322.072888 2806.756234 3266.158243 3430.632358 3825.788928 2912.781972 2591.751397 3465.831343 2777.326413 3000.55498 1.107152814 0.935412366 1.088518046 1.14333261 1.275027104 0.970747742 0.863757343 1.155063435 0.92560424 1 11.55101365 SMS(ph)APSDLEMIGNEDLEFTR ddPTM_A459_MK2206_30min_R2 1 SMSAPSDLEMIGNEDLEFTR 20 0 F8VWT9;J3KPF0;Q9Y4D8-2;Q9Y4D8-4;Q9Y4D8 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 S(0.119)MS(0.831)APS(0.051)DLEMIGNEDLEFTR 105.77 0.0013607 0 2251.4 3053.4 2335.4 2511.6 2356 2258.1 1792.7 691.34 1993 2767.5 TRUE FALSE 2423.768915 2901.772596 2413.26107 2306.394246 2263.491602 2344.033578 1557.316337 781.7005117 2166.347537 2677.196702 0.905338376 1.08388472 0.901413433 0.861495999 0.845470787 0.875555231 0.581696644 0.291984713 0.809185046 1 11.38650743 -7.19937802 4.709371898 0.611603834 0.91772129 0.277591142 0.181680927 0.227009995 10.28285332 0.070510924 0.053210346 6.32E-08 7.19937802 0.306117456 SMS(ph)APVIFDR ddPTM_A459_MK2206_30min_R1 1 SMSAPVIFDR 10 0 O60749;D6RC15 O60749 SNX2 Sorting nexin-2 1 S(0.272)MS(0.728)APVIFDR 108.35 0.010735 3880600 1698.9 2006.3 1831.7 1561.2 1907.5 1798.8 1854.7 1474.3 1779.7 1890.5 TRUE FALSE 1554.399634 1875.689505 1707.369307 1681.443895 1831.520236 1900.646502 1730.976347 1461.410351 1964.706184 2124.709413 0.731582222 0.882798134 0.803577796 0.791375933 0.862009753 0.894544209 0.814688511 0.687816575 0.924694065 1 11.05304983 -8.51593556 23.76359054 1.000000012 0.814583878 0.52247702 0.060757741 176.8974748 605443.5431 0.058533754 0.01511335 3.05E-09 8.51593556 -0.185416134 SMS(ph)DVSAEDVQNLR ddPTM_A459_MK2206_30min_R1 2 SMSDVSAEDVQNLR 14 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;Q8WWI1-3;E9PMP7;E9PK58;E9PLU6 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.099)MS(0.901)DVSAEDVQNLR;S(0.002)MS(0.997)DVS(0.001)AEDVQNLR 136.14 0.00096881 34351900 5244.2 5642.2 5666.7 4749.8 5547.7 4376.9 5871.3 5502.9 5733.2 6100.7 TRUE FALSE 4798.153252 5274.891754 5282.060192 5115.630419 5326.723362 4624.716296 5479.63629 5454.788725 6329.186656 6856.500774 0.699796209 0.769327085 0.77037258 0.746099299 0.776886569 0.674500951 0.799188459 0.795564517 0.923092823 1 12.74325677 -8.308984495 1.472359556 1.00097909 0.745772001 0.867767412 0.033725746 0.124801864 0.536559465 0.030847995 0.009395998 4.91E-09 8.308984495 -0.25520709 SMS(ph)DVSAEDVQNLR ddPTM_A459_MK2206_30min_R2 4 SMSDVSAEDVQNLR 14 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;Q8WWI1-3;E9PMP7;E9PK58;E9PLU6 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.008)MS(0.992)DVSAEDVQNLR;S(0.019)MS(0.981)DVSAEDVQNLR;S(0.079)MS(0.92)DVSAEDVQNLR;S(0.015)MS(0.985)DVSAEDVQNLR 189.33 9.68E-05 37963400 74742.1 90476 78956.5 101638 106427 94425 105441 67502.5 71324.3 92516.2 TRUE FALSE 80464.41264 85983.0934 81588.8703 93333.85028 102248.1412 98018.40954 91596.47004 76325.30852 77527.95869 89497.40397 0.899069795 0.960732821 0.911633932 1.042866565 1.142470471 1.095209528 1.023453933 0.85282148 0.866259302 1 16.44955821 -7.751634929 24.99400431 0.894655292 1.014585571 0.258427314 0.080143748 261.4273663 666448.1591 0.042618047 0.024220079 1.77E-08 7.751634929 0.11993028 SMS(ph)ENAVR ddPTM_A459_MK2206_30min_R1 3 SMSENAVR 8 0 A0A0A0MS29;Q9GZY8-2;C9JHF5;H7C433;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8-5 MFF Mitochondrial fission factor 1 S(0.015)MS(0.985)ENAVR;S(0.317)MS(0.683)ENAVR;S(0.324)MS(0.676)ENAVR 108.31 0.012929 170199000 7508 7745.1 6278.8 7016.6 10787.8 9209.6 12867.2 10674.9 12079.2 11749.9 TRUE FALSE 6869.405174 7240.892582 5852.61255 7557.019748 10358.09908 9731.039593 12008.85257 10581.57047 13334.87607 13205.56632 0.520190123 0.548321246 0.443192848 0.572260179 0.784373713 0.73688923 0.909378082 0.801296228 1.009792064 1 13.68885855 -6.695773875 0.668655935 0.969992037 0.471965554 0.882284817 0.066488938 0.247774599 0.244799371 0.050226653 0.056446534 2.01E-07 6.695773875 -0.498026484 SMS(ph)ENAVR ddPTM_A459_MK2206_30min_R2 3 SMSENAVR 8 0 A0A0A0MS29;Q9GZY8-2;C9JHF5;H7C433;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8-5 MFF Mitochondrial fission factor 1 S(0.063)MS(0.937)ENAVR;S(0.035)MS(0.965)ENAVR;S(0.188)MS(0.812)ENAVR 102.53 0.016148 186178000 306668 297489 295119 353257 292748 490495 512450 307828 596690 433171 TRUE FALSE 330146.7379 282716.1288 304958.1202 324394.7731 281253.2426 509161.1309 445164.6994 348062.1765 648589.0176 419036.6657 0.787870764 0.674681124 0.727759991 0.774144125 0.671190055 1.215075368 1.062352619 0.830624633 1.547809704 1 18.67671696 -6.757576643 24.99999179 1.116285283 0.726862369 0.571009657 0.174867556 74.38677427 481438.2953 0.056365178 0.054341667 1.75E-07 6.757576643 -0.389422914 SMS(ph)FQGIR ddPTM_A459_MK2206_30min_R1 1 SMSFQGIR 8 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 S(0.005)MS(0.995)FQGIR 110.38 0.012048 14116000 2933 1857.9 2860.2 2046.9 2511.9 2423.8 2446.1 1641.5 2429.2 1613.7 TRUE FALSE 2683.532948 1736.950372 2666.057593 2204.552593 2411.845704 2561.033461 2282.925132 1627.148539 2681.724033 1813.617339 1.479657749 0.957727044 1.470022113 1.215555534 1.329853687 1.412113463 1.258768916 0.897184044 1.478660341 1 10.82465437 -11.7505094 0.258251733 0.662130426 1.299356669 0.145880485 0.198164334 72.17898249 2.519700108 14.4704258 0.27421483 1.78E-12 11.7505094 0.637226243 SMS(ph)FQGIR ddPTM_A459_MK2206_30min_R2 3 SMSFQGIR 8 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 S(0.009)MS(0.991)FQGIR;S(0.342)MS(0.658)FQGIR;S(0.014)MS(0.986)FQGIR 120.63 0.0072913 54957400 81538 121640 80488 102697 92766 114208 112012 98704 83220 75029 TRUE FALSE 87780.61197 115599.5345 83171.42975 94306.32659 89123.54073 118554.2655 97304.68985 111604.9517 90458.32517 72580.80987 1.20941902 1.592701083 1.145914876 1.299328662 1.227921552 1.633410617 1.340639351 1.537664734 1.246311874 1 16.14730053 -8.535768556 21.99669065 0.999999991 1.374527906 0.343822685 0.157814785 428.6690179 731533.1187 0.147708549 0.038138183 2.91E-09 8.535768556 0.374527915 SMS(ph)PNLLNR ddPTM_A459_MK2206_30min_R2 1 SMSPNLLNR 9 0 Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3;F8VVB8 Q9Y4F3-3;F8VVB8 KIAA0430 Meiosis arrest female protein 1 1 S(0.186)MS(0.814)PNLLNR 117.25 0.0075913 7816200 37987 40623 35902 46159 44714 36961 47566 32875 38872 41254 TRUE FALSE 40895.31393 38605.72089 37098.95476 42387.66204 42958.30369 38367.57675 41320.52706 37171.87538 42253.0163 39907.88536 1.024742693 0.967370748 0.929614647 1.062137512 1.076436481 0.961403402 1.035397558 0.93144187 1.058763598 1 15.28438621 -5.759314768 24.99999183 1.015892521 0.973255514 0.149615402 0.047923051 114.0819779 1342347.338 0.013333759 0.021669538 1.74E-06 5.759314768 -0.042637007 SMS(ph)PTSTPK ddPTM_A459_MK2206_30min_R1 3 SMSPTSTPK 9 0 O94913;E9PKN0;E9PQ01 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 S(0.005)MS(0.862)PT(0.04)S(0.092)T(0.001)PK;SMS(0.44)PT(0.44)S(0.115)T(0.005)PK;S(0.087)MS(0.448)PT(0.448)S(0.017)TPK 117.52 0.0075058 55112400 19888.9 19090.6 17974.2 16550.1 16601.5 14665 15643.8 15484.9 14632.1 13049.1 TRUE FALSE 18197.24461 17847.79847 16754.16138 17824.79157 15940.2271 15495.31963 14600.23065 15349.51715 16153.15916 14665.72102 1.240801225 1.216973815 1.142402842 1.215405062 1.086903745 1.056567188 0.995534459 1.046625469 1.101422776 1 13.84016038 -6.41262012 2.375251191 1.039588034 1.202796153 0.815105115 0.036837366 0.130597282 1.44672875 0.01303685 0.015016462 3.87E-07 6.41262012 0.163208119 SMS(ph)PTSTPK ddPTM_A459_MK2206_30min_R2 3 SMSPTSTPK 9 0 O94913;E9PKN0;E9PQ01 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 S(0.027)MS(0.916)PT(0.043)S(0.013)TPK;S(0.362)MS(0.587)PT(0.016)S(0.034)TPK;S(0.016)MS(0.973)PT(0.003)S(0.008)TPK 117.52 0.0075058 87597000 313948 380693 306822 338676 313469 285004 335799 284723 248433 305727 TRUE FALSE 337984.1003 361788.3392 317051.2923 311005.0874 301160.632 295850.0269 291708.1879 321937.2737 270041.2533 295751.153 1.142798927 1.223286319 1.072020478 1.051576923 1.018290644 1.000334315 0.986329842 1.08854106 0.913069148 1 18.17402427 -5.561865226 1.769805515 1.006600769 1.186313848 0.683898112 0.046833166 0.201075145 1.232484696 0.013296522 0.035611256 2.74E-06 5.561865226 0.179713079 SMS(ph)YSSQK ddPTM_A459_MK2206_30min_R1 1 SMSYSSQK 8 0 Q9C0B5-2;Q9C0B5 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5 1 S(0.08)MS(0.888)YS(0.031)S(0.001)QK 85.958 0.034545 4159300 1160.9 1065.3 715.94 1162.2 1296.3 1054.2 1206.9 1471.8 806.65 1222.4 TRUE FALSE 1062.159359 995.9487764 667.3439875 1251.712845 1244.665626 1113.887893 1126.389903 1458.932208 890.5041541 1373.840141 0.773131697 0.724937893 0.485750829 0.911105163 0.905975586 0.81078421 0.819884257 1.061937386 0.648186152 1 10.42399843 -5.792073401 24.9999842 0.878008394 0.667639715 0.386507379 0.126016056 197.6212304 161275.0533 0.034095333 0.050578019 1.61E-06 5.792073401 -0.210368679 SMS(ph)YSSQK ddPTM_A459_MK2206_30min_R2 1 SMSYSSQK 8 0 Q9C0B5-2;Q9C0B5 Q9C0B5-2 ZDHHC5 Palmitoyltransferase ZDHHC5 1 S(0.001)MS(0.67)YS(0.323)S(0.006)QK 89.029 0.030241 5416300 21946 11654 15621 19748 17988 15469 25330 11682 20807 21051 TRUE FALSE 23626.20263 11075.27931 16141.79634 18134.52523 17281.70074 16057.68363 22004.14057 13208.87751 22616.75525 20364.10759 1.16018846 0.543862738 0.792659156 0.890514114 0.848635309 0.788528717 1.08053547 0.648635225 1.11061853 1 14.31374097 -8.214719621 0.724496632 1.019100441 0.82752314 0.089918729 0.183378208 1.576163226 1.821632049 0.167266079 0.069646936 6.10E-09 8.214719621 -0.1915773 SMSLIPTS(ph)PQVPGEWPSPEELGAR ddPTM_A459_MK2206_30min_R2 2 SMSLIPTSPQVPGEWPSPEELGAR 24 0 M0QZ22;Q5PRF9;A0A087WZT0;M0R0X3 M0QZ22 SAMD4B Protein Smaug homolog 2 1 S(0.06)MS(0.06)LIPT(0.187)S(0.693)PQVPGEWPSPEELGAR;S(0.013)MS(0.035)LIPT(0.23)S(0.721)PQVPGEWPSPEELGAR 77.231 0.00023807 3020400 10025.8 12299.5 11167.8 11082.4 11254.4 12844.2 10175.3 7789.2 9738.7 13104.3 TRUE FALSE 10793.38296 11688.72472 11540.12888 10176.93247 10812.49571 13332.99503 8839.270887 8807.275184 10585.75452 12676.70776 0.851434233 0.92206312 0.910341162 0.802805638 0.85294194 1.051771113 0.697284425 0.694760449 0.835055499 1 13.62989249 -7.288874972 24.99755946 0.781338482 0.893737479 0.145122254 0.101505833 1164.834842 1061318.115 0.041447546 0.027951197 5.14E-08 7.288874972 0.112398997 SMSSIPPYPAS(ph)SLASSSPPGSGR ddPTM_A459_MK2206_30min_R2 1 SMSSIPPYPASSLASSSPPGSGR 23 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 SMSSIPPY(0.002)PAS(0.687)S(0.172)LAS(0.028)S(0.028)S(0.084)PPGSGR 103.71 0.0023274 0 25454 30554 25971 32865 30452 31208 33937 26988 33835 23674 TRUE FALSE 27402.77781 29036.73279 26836.86018 30179.82437 29256.30147 32395.64231 29481.03113 30515.42426 36777.90714 22901.51932 1.196548466 1.267895478 1.171837545 1.31780883 1.277482994 1.414563019 1.287295866 1.332462875 1.6059156 1 14.48315569 -6.034575202 1.932774303 1.342343887 1.218091047 0.085840689 0.143501545 0.727554789 5.43351877 0.044669979 0.069666992 9.23E-07 6.034575202 -0.12425284 SMSSIPPYPASSLAS(ph)SSPPGSGR ddPTM_A459_MK2206_30min_R1 1 SMSSIPPYPASSLASSSPPGSGR 23 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 SMSSIPPYPAS(0.004)S(0.015)LAS(0.365)S(0.365)S(0.251)PPGSGR 176.44 1.58E-16 17312000 11527 10622 10682 9907.7 11576 10974 11630 10543 9877.1 9638.6 TRUE FALSE 10546.56812 9930.505869 9956.935602 10670.79277 11114.90341 11595.3384 10854.18392 10450.82366 10903.85989 10832.70254 0.973586054 0.916715458 0.919155268 0.985053613 1.026050828 1.070401256 1.001983012 0.96474759 1.006568754 1 13.40310559 -5.930439011 4.296191942 1.011958627 0.935016547 0.576847471 0.028707393 0.162213369 5.886021699 0.009100562 0.013747131 1.17E-06 5.930439011 -0.07694208 SMSSIPPYPASSLAS(ph)SSPPGSGR ddPTM_A459_MK2206_30min_R2 1 SMSSIPPYPASSLASSSPPGSGR 23 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 SMSSIPPYPASSLAS(0.38)S(0.38)S(0.24)PPGSGR 232.6 3.16E-31 10022000 65492 88432 71434 94561 78710 89210 85155 70663 81727 74890 TRUE FALSE 70506.11787 84040.59547 73815.57391 86835.06381 75619.44991 92604.94906 73974.04621 79898.89672 88835.46673 72446.34543 0.973218421 1.160039129 1.018899897 1.198612067 1.043799373 1.278255632 1.021087341 1.102869941 1.226224266 1 16.14462529 -4.751325781 24.72291038 1.119152724 0.973218076 0.17914339 0.09196283 603.3706406 1474836.115 0.021109628 0.278236437 1.77E-05 4.751325781 -0.145934648 SMSSIPPYPASSLASSS(ph)PPGSGR ddPTM_A459_MK2206_30min_R1 1 SMSSIPPYPASSLASSSPPGSGR 23 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 SMSSIPPYPAS(0.001)SLAS(0.188)S(0.188)S(0.616)PPGS(0.007)GR 202.21 4.67E-23 21317000 12259 11380 11108 10077 12601 11671 11805 10750 11175 10516 TRUE FALSE 11216.30768 10639.15993 10354.01991 10853.13229 12099.07549 12331.80193 11017.50999 10656.01388 12336.68124 11818.80147 0.949022429 0.900189411 0.876063443 0.918293814 1.02371425 1.043405456 0.932201968 0.90161544 1.043818298 1 13.52879612 -6.136625846 6.225978121 0.985357701 0.906112547 0.418030533 0.04595735 0.263258264 12.27318066 0.014490457 0.018834864 7.30E-07 6.136625846 -0.079245155 SMSSIPPYPASSLASSS(ph)PPGSGR ddPTM_A459_MK2206_30min_R2 4 SMSSIPPYPASSLASSSPPGSGR 23 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 SMSSIPPYPAS(0.002)S(0.002)LAS(0.191)S(0.191)S(0.613)PPGS(0.001)GR;SMSSIPPYPASSLAS(0.239)S(0.239)S(0.521)PPGSGR;SMSSIPPYPASS(0.002)LAS(0.079)S(0.079)S(0.84)PPGSGR;SMSSIPPYPAS(0.144)S(0.144)LAS(0.144)S(0.144)S(0.424)PPGS(0.002)GR 195.25 1.30E-22 24366100 237449 311927 255799 316727 277749 305282 332379 274011 292791 296688 TRUE FALSE 255628.278 296437.1588 264327.211 290849.3909 266843.1787 316899.7204 288737.238 309825.1785 318257.4319 287007.0949 0.890668846 1.032856553 0.920977968 1.01338746 0.929744189 1.104152915 1.006028224 1.079503553 1.1088835 1 18.13072688 -6.757978041 24.99999822 1.061327274 0.962784831 0.49239312 0.051726133 76.93337262 555660.7939 0.016303723 0.015681357 1.75E-07 6.757978041 -0.098542444 SMVWPGDGLVPDT(ph)AEPHVAPSPTLPSTEDVIR ddPTM_A459_MK2206_30min_R2 2 SMVWPGDGLVPDTAEPHVAPSPTLPSTEDVIR 32 0 F8VXI9;Q14161-6;Q14161-4;Q14161-3;Q14161;R4GNG3;F8WAK2;Q14161-11;Q14161-7;Q14161-9;Q14161-10;Q14161-8;Q14161-5 F8VXI9 GIT2 ARF GTPase-activating protein GIT2 1 S(0.027)MVWPGDGLVPDT(0.973)AEPHVAPSPTLPSTEDVIR;S(0.109)MVWPGDGLVPDT(0.891)AEPHVAPSPTLPSTEDVIR 97.3 1.30E-08 5685100 8281 11517.8 13724.5 11906.6 11121.1 6879.6 15027.8 8470.2 8355.3 10794.9 TRUE FALSE 8914.999727 10945.8428 14182.06798 10933.79269 10684.42973 7141.407999 13054.63181 9577.284223 9082.028891 10442.6633 0.853709391 1.048184978 1.358089175 1.047031048 1.023151799 0.683868453 1.250124747 0.917130425 0.869704273 1 13.35020208 -6.337252491 3.79364383 0.950373969 1.095797245 0.104947089 0.174648228 0.52696924 14.63253921 0.056829258 0.066147146 4.60E-07 6.337252491 0.145423277 SNDRNS(ph)MDIQCEVDALLER ddPTM_A459_MK2206_30min_R1 5 SNDRNSMDIQCEVDALLER 19 1 Q02241;H7BYN4;A0A2U3TZL8;A0A2R8Y531;H0YME6;Q02241-2 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 S(0.14)NDRNS(0.86)MDIQCEVDALLER;S(0.411)NDRNS(0.589)MDIQCEVDALLER;S(0.01)NDRNS(0.99)MDIQCEVDALLER;S(0.064)NDRNS(0.936)MDIQCEVDALLER;S(0.049)NDRNS(0.951)MDIQCEVDALLER 161.2 8.12E-07 35581200 3737.19 3328.46 3532.68 3597.21 3670.07 3159.32 3380.36 3133.98 2902.14 2936.32 TRUE FALSE 3419.322366 3111.776649 3292.891524 3874.267737 3523.88334 3338.197968 3154.862352 3106.579943 3203.827838 3300.09349 1.036128939 0.942935907 0.997817648 1.173987267 1.067813185 1.011546485 0.955991811 0.941361193 0.970829417 1 11.68829118 -7.083485634 3.832241391 0.962664701 1.042728413 0.28795241 0.056497215 0.342932752 9.391540335 0.025015655 0.019405007 8.25E-08 7.083485634 0.080063713 SNDRNS(ph)MDIQCEVDALLER ddPTM_A459_MK2206_30min_R2 2 SNDRNSMDIQCEVDALLER 19 1 Q02241;H7BYN4;A0A2U3TZL8;A0A2R8Y531;H0YME6;Q02241-2 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 S(0.367)NDRNS(0.633)MDIQCEVDALLER;S(0.034)NDRNS(0.966)MDIQCEVDALLER 113.08 0.00029998 7316100 10389.2 9754.7 11134.9 11553.5 11338 13619.2 12898.9 11183.7 10660.6 14495 TRUE FALSE 11184.60514 9270.295783 11506.13201 10609.54209 10892.81315 14137.4882 11205.25894 12645.44799 11587.83972 14022.02934 0.797645253 0.66112369 0.820575377 0.756633854 0.776835713 1.008234105 0.799118207 0.901827238 0.826402473 1 13.77540754 -6.590743576 11.60088605 0.894199774 0.757690389 0.494647153 0.072643228 0.531276192 88.79100124 0.022726584 0.022723881 2.57E-07 6.590743576 -0.136509385 SNEDQS(ph)MGNWQIK ddPTM_A459_MK2206_30min_R1 1 SNEDQSMGNWQIK 13 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.006)NEDQS(0.994)MGNWQIK 146.78 0.00059113 3810000 1239.9 1196.6 1465.6 1035.6 1353.2 1137.9 1169.5 1042 1187.8 1096.6 TRUE FALSE 1134.439994 1118.701123 1366.119155 1115.362091 1299.299179 1202.326915 1091.484789 1032.889904 1311.276061 1232.455087 0.920471672 0.907701331 1.108453501 0.904992079 1.054236534 0.975554345 0.885618308 0.838075087 1.063954439 1 10.26731936 -7.034718214 23.7511984 0.933013634 0.981925156 0.022630369 0.083267686 989.9928347 677264.0719 0.031179109 0.024167953 9.23E-08 7.034718214 0.048911521 SNEDQS(ph)MGNWQIK ddPTM_A459_MK2206_30min_R2 1 SNEDQSMGNWQIK 13 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SNEDQS(1)MGNWQIK 127.75 0.0018952 4796500 21362 18049 15885 18270 15348 19772 21830 19193 15087 21625 TRUE FALSE 22997.49114 17152.71291 16414.59797 16777.28256 14745.3604 20524.43731 18963.69478 21701.591 16399.23999 20919.37802 1.099339145 0.819943733 0.784659943 0.801997198 0.7048661 0.98112082 0.906513318 1.037391789 0.783925792 1 14.35255234 -6.806244702 24.99997526 0.941922561 0.835500262 0.158195029 0.114396775 242.8944643 135525.8703 0.040124192 0.035386385 1.56E-07 6.806244702 -0.1064223 SNEDQSMGNWQIK ddPTM_A459_MK2206_30min_R1 3 SNEDQSMGNWQIK 13 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ;; 219.43 2.09E-06 39002700 6140.2 6645.9 6624.5 5351.5 5855.5 5592.1 6917.4 5606.6 5745 5424.63 FALSE TRUE 5617.943747 6213.250702 6174.847397 5763.673457 5622.263036 5908.719869 6455.952868 5557.582087 6342.213309 6096.674118 0.921476798 1.019121341 1.012822283 0.945379947 0.922185265 0.969171019 1.058930286 0.911576046 1.040274285 1 12.57380672 -7.041894005 24.98038535 0.99800137 0.966581778 0.129098737 0.047250694 1288.224103 768133.0528 0.018045254 0.013979339 9.08E-08 7.041894005 -0.031419592 SNEDS(ph)LILEK ddPTM_A459_MK2206_30min_R1 1 SNEDSLILEK 10 0 A0A0U1RRH6;O94880 A0A0U1RRH6 PHF14 PHD finger protein 14 1 S(0.002)NEDS(0.998)LILEK 118.52 0.0056857 3455900 1921.7 2347.1 2320.7 1892.1 2049.8 1812.4 1930.7 1873.4 2074.2 1867.2 TRUE FALSE 1758.249324 2194.303363 2163.17735 2037.82987 1968.152125 1915.016522 1801.906526 1857.021061 2289.820513 2098.522833 0.837850938 1.045641882 1.030809537 0.971078245 0.937875011 0.912554532 0.858654715 0.884918206 1.091158255 1 11.03515844 SNEDS(ph)LILEK ddPTM_A459_MK2206_30min_R2 1 SNEDSLILEK 10 0 A0A0U1RRH6;O94880 A0A0U1RRH6 PHF14 PHD finger protein 14 1 S(0.008)NEDS(0.992)LILEK 83.633 0.039663 2147600 25639 41041 34172 40131 53263 49600 36138 28136 34877 22597 TRUE FALSE 27601.94155 39002.96362 35311.27742 36852.16893 51171.62699 51487.56276 31393.03719 31813.47181 37910.53842 21859.66174 1.262688411 1.784243694 1.615362481 1.685852662 2.340915775 2.355368686 1.436117245 1.455350599 1.734269215 1 14.41598346 -8.883550486 0.835281437 1.007075275 1.801591763 0.303392066 0.339620355 1.641185127 2.064904978 0.366538659 0.124326412 1.31E-09 8.883550486 0.794516488 SNEEEET(ph)SDSSLEK ddPTM_A459_MK2206_30min_R2 1 SNEEEETSDSSLEK 14 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 SNEEEET(0.497)S(0.497)DS(0.004)S(0.002)LEK 97.129 0.026454 6753100 27373 34120 29152 26616 27716 30272 32321 26125 23457 29679 TRUE FALSE 29468.69793 32425.65042 30123.91313 24441.38766 26627.73058 31424.02217 28077.21388 29539.6272 25497.24746 28710.57666 1.026405644 1.129397392 1.049227032 0.851302569 0.927453701 1.09451031 0.97793974 1.028876137 0.888078556 1 14.80929469 -5.538777699 24.98666042 0.970530469 1.08075423 0.315355387 0.069200949 266.3976016 418666.5328 0.01923152 0.033322526 2.89E-06 5.538777699 0.11022376 SNEEGS(ph)EEKGPEVR ddPTM_A459_MK2206_30min_R1 2 SNEEGSEEKGPEVR 14 1 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 1 S(0.002)NEEGS(0.998)EEKGPEVR;SNEEGS(1)EEKGPEVR 183.73 5.54E-14 5589300 2984.63 3575.5 3585.7 3518.3 3034 2402.4 2669.5 2854.3 3057.3 2950.2 TRUE FALSE 2730.771546 3342.7343 3342.312674 3789.280076 2913.149355 2538.421812 2491.422526 2829.345156 3375.117276 3315.693049 0.823589972 1.008155535 1.008028374 1.142831987 0.878594403 0.765578048 0.751403248 0.853319386 1.017922113 1 11.69509474 -6.493135276 24.64154187 0.85630907 0.999089272 0.208612749 0.108460234 791.9954861 656144.1411 0.034593955 0.039162401 3.21E-07 6.493135276 0.142780202 SNEEGSEEKGPEVR ddPTM_A459_MK2206_30min_R1 3 SNEEGSEEKGPEVR 14 1 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 0 ;; 152.11 0.001096 50028200 7930.1 7971.9 8629.1 8090.1 7582.4 6869.7 7595.1 8635.9 7370.5 6809.6 FALSE TRUE 7255.603352 7452.927861 8043.380734 8713.200904 7280.376952 7258.656477 7088.444737 8560.397237 8136.689851 7653.224658 0.948045259 0.973828444 1.050979305 1.138500605 0.951282273 0.948444192 0.926203666 1.118534686 1.063171436 1 12.90185203 -7.770492034 24.99948845 1.068139776 0.995187922 0.188630517 0.065122002 354.8142162 979825.9644 0.037829987 0.018585744 1.70E-08 7.770492034 -0.072951854 SNEEGSEEKGPEVR ddPTM_A459_MK2206_30min_R2 2 SNEEGSEEKGPEVR 14 1 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 0 ; 101.72 0.022798 27083000 35706 44018 40234 42399 45228 39708 45189 39155 43317 37168 FALSE TRUE 38439.67881 41832.13013 41575.38148 38934.86607 43452.12147 41219.11576 39255.63002 44272.69294 47084.63436 35955.2112 1.069098957 1.163451103 1.156310312 1.082871294 1.208506918 1.146401714 1.091792503 1.231328963 1.309535747 1 15.13391326 -2.657068756 0.615855021 1.16657616 4.52E-17 0.065136875 0.082325151 120.7896698 3.877335413 0.036318974 169.9919735 0.002202578 2.657068756 -1.16657616 SNES(ph)VDIQDQEEK ddPTM_A459_MK2206_30min_R1 1 SNESVDIQDQEEK 13 0 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.075)NES(0.925)VDIQDQEEK 162.81 1.63E-06 0 1114.7 1130.7 679.81 872.11 818.58 1085 894.06 894.93 778.4 618.31 TRUE FALSE 1019.888911 1057.091224 633.6663913 939.2800633 785.9742252 1146.431762 834.4188887 887.1057214 859.3174655 694.9109108 1.467654192 1.521189563 0.911867092 1.351655369 1.13104315 1.649753579 1.200756638 1.276574749 1.236586521 1 9.440684223 -8.872855526 1.084391702 1.000377723 1.315480897 0.190090771 0.197013866 2.126168445 4.223142867 0.188824579 0.059295862 1.34E-09 8.872855526 0.315103174 SNES(ph)VDIQDQEEK ddPTM_A459_MK2206_30min_R2 2 SNESVDIQDQEEK 13 0 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.001)NES(0.999)VDIQDQEEK;S(0.007)NES(0.993)VDIQDQEEK 140.68 0.0013474 0 34210 43632 30310 42153 36532 31240 40032 32856 28797 24167 TRUE FALSE 36829.1439 41465.29833 31320.52027 38708.96506 35097.57012 32428.86009 34775.75031 37150.39201 31301.71101 23378.43277 1.575346999 1.773656033 1.339718559 1.655755347 1.501279853 1.387127204 1.487514183 1.589088216 1.338914003 1 14.5128906 -12.61687526 0.184871371 3.99E-11 1.645824203 0.661836409 0.118455109 36.62428777 0.670834896 14.65460253 0.367018036 2.42E-13 12.61687526 1.645824203 SNETQNPHKPS(ph)PSR ddPTM_A459_MK2206_30min_R1 1 SNETQNPHKPSPSR 14 1 A0A5S6SZ32;Q96LW4-2;Q96LW4 A0A5S6SZ32 PRIMPOL DNA-directed primase/polymerase protein 1 SNETQNPHKPS(0.5)PS(0.5)R 66.977 0.037175 3592500 1149.2 1140.4 1129.9 797.99 1502.8 1136.8 1413.9 1134.8 958 831.94 TRUE FALSE 1051.454505 1066.159753 1053.205536 859.4513281 1442.940294 1201.164634 1319.581311 1124.878563 1057.587528 935.007008 1.124541844 1.140269264 1.126414591 0.919192392 1.543240084 1.284658429 1.411306332 1.20306966 1.131101178 1 9.868833368 -6.242775763 24.99937864 1.280958104 1.085567032 0.259156801 0.150704291 1113.140071 1491019.299 0.044060999 0.056780826 5.72E-07 6.242775763 -0.195391072 SNFSNS(ph)ADDIK ddPTM_A459_MK2206_30min_R1 2 SNFSNSADDIK 11 0 P45973 P45973 CBX5 Chromobox protein homolog 5 1 SNFS(0.135)NS(0.865)ADDIK;SNFS(0.003)NS(0.997)ADDIK 125.97 0.0034296 5867000 3472.1 3069.2 3955 3345.7 3372.1 2845.7 3741.3 3160.1 3348.6 3050.3 TRUE FALSE 3176.779662 2869.394522 3686.545619 3603.386394 3237.782116 3006.821075 3491.724703 3132.471579 3696.698953 3428.194193 0.926662693 0.836998828 1.075360791 1.051103348 0.944457033 0.877085983 1.018531771 0.91373808 1.078322506 1 11.74323312 -5.24701629 24.99457203 0.988596958 0.88183076 0.311248106 0.066722188 1038.108817 1798989.761 0.017301462 0.045321119 5.66E-06 5.24701629 -0.106766198 SNGDLS(ph)PK ddPTM_A459_MK2206_30min_R2 1 SNGDLSPK 8 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 SNGDLS(1)PK 89.9 0.02902 27649000 321880 244790 259370 215850 204970 150730 285760 237430 198900 295760 TRUE FALSE 346523.3803 232634.0846 268017.2663 198214.3645 196921.8479 156466.1358 248239.3687 268462.9162 216199.9625 286109.3754 1.211157026 0.813094937 0.93676506 0.692792273 0.688274712 0.546875248 0.867638009 0.938322681 0.755654938 1 18.12620725 SNGELSES(ph)PGAGK ddPTM_A459_MK2206_30min_R1 4 SNGELSESPGAGK 13 0 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-2;F5GXF5;A0A0A0MR81;F5H176 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 SNGELS(0.002)ES(0.998)PGAGK;SNGELS(0.013)ES(0.987)PGAGK;SNGELS(0.125)ES(0.874)PGAGK;SNGELS(0.239)ES(0.761)PGAGK 142.57 0.00076849 61648300 23344.9 24076.6 22299.8 21190.5 20197 18584.2 20731.2 19241.9 20402 16236.8 TRUE FALSE 21359.29367 22509.20896 20786.15171 22822.59598 19392.51072 19636.42134 19348.25947 19073.6701 22522.86091 18248.33737 1.17047889 1.233493688 1.13907099 1.250667144 1.062700143 1.076066326 1.060275196 1.045227832 1.234241808 1 14.1554774 -6.272555588 24.97921451 1.080855159 1.19669263 0.455484093 0.063549495 664.2151161 1492553.553 0.018847377 0.021571195 5.34E-07 6.272555588 0.115837471 SNGELSES(ph)PGAGK ddPTM_A459_MK2206_30min_R2 4 SNGELSESPGAGK 13 0 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-2;F5GXF5;A0A0A0MR81;F5H176 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 SNGELS(0.229)ES(0.771)PGAGK;SNGELS(0.059)ES(0.941)PGAGK;SNGELS(0.005)ES(0.995)PGAGK;SNGELS(0.044)ES(0.956)PGAGK 164.7 0.00036263 93596000 203016 223458 198891 205863 207099 182179 245086 189980 155144 205568 TRUE FALSE 218559.0611 212361.4007 205521.9267 189043.3344 198967.2527 189111.9495 212905.9138 214811.0383 168638.1447 198860.333 1.099058107 1.067892211 1.033498856 0.950633701 1.000537662 0.950978743 1.07063038 1.080210593 0.848023043 1 17.601396 -5.346064016 2.526356369 0.991962455 1.089485124 0.278677815 0.062338398 0.409999726 4.994696117 0.017203427 0.049281996 4.51E-06 5.346064016 0.097522669 SNGVTPGTQS(ph)SPAPSTR ddPTM_A459_MK2206_30min_R2 1 SNGVTPGTQSSPAPSTR 17 0 Q8TDW5;Q8TDW5-2 Q8TDW5 SYTL5 Synaptotagmin-like protein 5 1 SNGVT(0.007)PGT(0.278)QS(0.558)S(0.158)PAPSTR 144.25 0.00032805 0 2719.7 6136.2 3588.5 6493.7 5649.1 5402.1 4338.6 3932.2 5153.6 5336.5 TRUE FALSE 2927.922323 5831.485231 3708.138799 5963.143938 5427.28795 5607.680701 3768.936608 4446.152041 5601.850812 5162.370442 0.567166257 1.129613866 0.718301571 1.155117403 1.051317028 1.086260811 0.730078682 0.861261719 1.085131506 1 12.33381795 -4.746933395 24.99473282 0.970424522 0.567165211 0.401973936 0.150564084 825.5056493 1422318.629 0.037271409 0.803971945 1.79E-05 4.746933395 -0.40325931 SNLDEEVNVIPPHT(ph)PVR ddPTM_A459_MK2206_30min_R1 4 SNLDEEVNVIPPHTPVR 17 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR 212.41 5.14E-09 76247700 10954.3 9902.1 11128.4 7772.7 9991.1 9889.1 11362 8901.64 10249.5 12357 TRUE FALSE 10022.57926 9257.47149 10373.03521 8371.354701 9593.13333 10449.0123 10604.06171 8823.8139 11314.9722 13887.87845 0.72167821 0.666586442 0.746912874 0.602781392 0.690755853 0.752383622 0.763547993 0.635360824 0.814737272 1 13.76153861 -8.570281367 4.194188778 0.999864081 0.699360635 0.781714819 0.049415508 0.107827362 5.965989832 0.047749846 0.012487086 2.69E-09 8.570281367 -0.300503446 SNLDEEVNVIPPHT(ph)PVR ddPTM_A459_MK2206_30min_R2 8 SNLDEEVNVIPPHTPVR 17 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR 131.41 0.0010653 104966300 259491.6 253977.6 233155.5 284211.2 284186.1 242599 295758.8 207758.5 202616.1 276707.2 TRUE FALSE 279358.4764 241365.4417 240928.788 260990.2358 273027.5258 251831.2749 256925.3143 234913.2493 220239.2821 267678.2667 1.043635256 0.901699808 0.900068545 0.975014666 1.019983913 0.940798362 0.959828818 0.877595526 0.822776107 1 18.03014048 -7.756382406 24.45819375 0.887639354 0.960025142 0.18127205 0.0592535 137.0673331 662943.1664 0.028506306 0.015795524 1.75E-08 7.756382406 0.072385788 SNLY(ph)KFTAS(ph)AS(ph)HT(ph)ERKLK ddPTM_A459_MK2206_30min_R2 1 SNLYKFTASASHTERKLK 18 3 Q9Y4E5;Q9Y4E5-2;E9PH99 Q9Y4E5 ZNF451 Zinc finger protein 451 4 S(0.166)NLY(0.717)KFT(0.145)AS(0.972)AS(1)HT(1)ERKLK 60.209 0.042279 0 10159 9630.2 8057.4 6057.5 6705.8 4531.8 8831.3 5127.2 4107.3 9163.7 TRUE FALSE 10936.78085 9151.978272 8326.029695 5562.582873 6442.496598 4704.260825 7671.739702 5797.342644 4464.54553 8864.689219 1.233746675 1.032408249 0.939235374 0.627498916 0.726759443 0.530674083 0.865426809 0.653981488 0.503632493 1 13.11385434 -5.32382087 1.549005387 0.685867458 1.217386931 0.592178191 0.145813414 0.318944974 1.303548317 0.041618242 0.186734633 4.74E-06 5.32382087 0.531519473 SNMS(ph)PHGLPAR ddPTM_A459_MK2206_30min_R1 1 SNMSPHGLPAR 11 0 H0Y4T7;E7ESY4;Q13330-3;Q13330 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 S(0.008)NMS(0.992)PHGLPAR 83.087 0.038756 15758000 3521.3 2180.3 2030.1 1757.2 4437.8 4227.7 4050.9 3029.8 1854.1 1564.3 TRUE FALSE 3221.794944 2038.362074 1892.302468 1892.539848 4261.033029 4467.06872 3780.671852 3003.310778 2046.84033 1758.097294 1.832546444 1.159413692 1.076335465 1.076470486 2.423661673 2.540854102 2.150433804 1.708273364 1.164236096 1 10.7797992 -6.24286192 24.92007017 1.918096949 1.262146217 0.206462002 0.505722107 1125.154042 1509297.539 0.155984288 0.20100703 5.72E-07 6.24286192 -0.655950732 SNMS(ph)PHGLPAR ddPTM_A459_MK2206_30min_R2 3 SNMSPHGLPAR 11 0 H0Y4T7;E7ESY4;Q13330-3;Q13330 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 S(0.1)NMS(0.9)PHGLPAR;S(0.003)NMS(0.997)PHGLPAR;S(0.005)NMS(0.995)PHGLPAR 80.632 0.028719 43239900 111275 150451 115980 151139 142577 158521 177288 112538 118346 136780 TRUE FALSE 119794.2996 142979.8221 119846.7153 138790.4602 136978.7106 164553.6277 154009.8726 127247.103 128639.5212 132316.8798 0.905359163 1.08058641 0.905755301 1.048924827 1.035232321 1.243632921 1.163947282 0.96168458 0.97220794 1 17.01363759 -5.941873673 8.39899304 1.072038618 0.97540395 0.178325349 0.09349071 0.515391644 67.04652747 0.028194395 0.041889747 1.14E-06 5.941873673 -0.096634668 SNNWS(ph)LEDVTASDK ddPTM_A459_MK2206_30min_R1 2 SNNWSLEDVTASDK 14 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 SNNWS(0.675)LEDVT(0.325)ASDK;SNNWS(1)LEDVTASDK 152.37 0.0003838 8544500 2437.87 2073.19 2549.1 1972.68 2069.46 1844.52 2654.89 2475.7 2595.4 2911.9 TRUE FALSE 2230.516355 1938.224954 2376.074194 2124.616155 1987.029026 1948.955128 2477.787132 2454.055216 2865.201118 3272.648156 0.68156314 0.59224972 0.726040222 0.649203964 0.607162436 0.595528464 0.757119927 0.749868333 0.875499284 1 11.67624279 -8.24990516 1.031097478 0.997352274 0.643955316 0.866078505 0.045678833 0.16794897 0.364649126 0.043663521 0.014970835 5.62E-09 8.24990516 -0.353396959 SNNWS(ph)LEDVTASDK ddPTM_A459_MK2206_30min_R2 2 SNNWSLEDVTASDK 14 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 SNNWS(0.858)LEDVT(0.138)AS(0.004)DK;S(0.001)NNWS(0.999)LEDVT(0.001)ASDK 110.32 0.0042885 8973100 36333 30799 33241 36512 33504 30189 44603 32788 23792 44572 TRUE FALSE 39114.68242 29269.56645 34349.23835 33528.8528 32188.46462 31337.86355 38746.57252 37073.50418 25861.38515 43117.61929 0.907162386 0.678830764 0.79664042 0.777613731 0.746526945 0.726799486 0.898625044 0.859822615 0.599786945 1 15.3959899 -7.242384889 24.54127966 0.827877221 0.768196962 0.079701618 0.108653554 1944.463538 2504379.562 0.039878347 0.030832417 5.72E-08 7.242384889 -0.059680259 SNPTPMEPT(ph)SPGEHQQNSK ddPTM_A459_MK2206_30min_R1 1 SNPTPMEPTSPGEHQQNSK 19 0 A0A1B0GVL4;P78312-6;P78312-2;P78312-5;P78312;E7EUR8;P78312-4 A0A1B0GVL4;E7EUR8 FAM193A Protein FAM193A 1 S(0.004)NPT(0.026)PMEPT(0.485)S(0.485)PGEHQQNSK 68.625 0.025598 4691100 1766.2 1520.4 1327.9 1305.6 1570.2 1514.6 1534 1398.7 1348.2 1332.5 TRUE FALSE 1615.975415 1421.421684 1237.765848 1406.157538 1507.655609 1600.355343 1431.669659 1386.471313 1488.350215 1497.58016 1.079057708 0.949145643 0.826510581 0.938953103 1.00672782 1.068627501 0.955988666 0.925807747 0.99383676 1 10.54841751 -4.75821695 24.59442892 0.959981522 1.079057912 0.249736826 0.060245096 116.2698677 887219.2532 0.016442201 0.113765432 1.74E-05 4.75821695 0.11907639 SNPTPMEPTS(ph)PGEHQQNSK ddPTM_A459_MK2206_30min_R2 4 SNPTPMEPTSPGEHQQNSK 19 0 A0A1B0GVL4;P78312-6;P78312-2;P78312-5;P78312;E7EUR8;P78312-4 A0A1B0GVL4;E7EUR8 FAM193A Protein FAM193A 1 SNPTPMEPT(0.039)S(0.961)PGEHQQNSK;SNPTPMEPT(0.011)S(0.989)PGEHQQNSK;SNPTPMEPT(0.003)S(0.997)PGEHQQNSK;SNPT(0.001)PMEPT(0.033)S(0.966)PGEHQQNSK 138 0.00010121 28845700 131115 156797 150191 172562 162646 147539 173446 125692 126895 151248 TRUE FALSE 141153.2652 149010.689 155198.293 158463.1326 156259.7008 153153.7 150672.3319 142120.376 137932.0977 146312.7901 0.964736337 1.018439255 1.060729502 1.083043611 1.067983877 1.046755379 1.02979604 0.971346222 0.942720712 1 17.15869636 -7.724604608 3.817710758 0.96628793 1.04302222 0.464620854 0.033147176 0.197824396 6.045265528 0.019464836 0.009882259 1.89E-08 7.724604608 0.07673429 SNQSLGWGDSSKPVS(ph)SPDWNK ddPTM_A459_MK2206_30min_R1 1 SNQSLGWGDSSKPVSSPDWNK 21 1 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 SNQS(0.001)LGWGDS(0.003)S(0.003)KPVS(0.496)S(0.496)PDWNK 75.608 0.0016437 42219000 6415.2 7731.9 7351.2 5924.3 5515.2 5472.1 6453.2 5596.3 7634.9 7156.4 TRUE FALSE 5869.553552 7228.551905 6852.221026 6380.590613 5295.517905 5781.925573 6022.718803 5547.372139 8428.575177 8042.98886 0.729772682 0.898739515 0.851949586 0.793310885 0.658401746 0.71887773 0.748816007 0.689715258 1.047940675 1 12.97351601 -8.268354199 24.99902139 1.023970385 0.764628189 0.696778812 0.06930857 362.5748535 1310791.989 0.068646127 0.019259532 5.39E-09 8.268354199 -0.259342196 SNQSLGWGDSSKPVS(ph)SPDWNK ddPTM_A459_MK2206_30min_R2 2 SNQSLGWGDSSKPVSSPDWNK 21 1 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 SNQSLGWGDS(0.007)S(0.007)KPVS(0.493)S(0.493)PDWNK;SNQSLGWGDSSKPVS(0.5)S(0.5)PDWNK 83.063 0.00079012 53313000 165781 159324 166411 154877 142340 94601 178720 139525 119068 153654 TRUE FALSE 178473.3208 151412.2018 171959.0597 142223.0537 136751.0164 98201.10735 155253.8493 157761.3966 129424.3194 148640.2826 1.200706281 1.018648506 1.156880603 0.956827121 0.920013162 0.660662814 1.044493771 1.061363675 0.870721699 1 17.18146562 -5.851630981 5.138771407 0.923548114 1.114250703 0.379846945 0.114094535 0.234870014 10.22644558 0.033807787 0.051491477 1.41E-06 5.851630981 0.19070259 SNS(ph)APLIHGLSDTSPVFQAEAPSAR ddPTM_A459_MK2206_30min_R1 2 SNSAPLIHGLSDTSPVFQAEAPSAR 25 0 Q96E09 Q96E09 FAM122A Protein FAM122A 1 S(0.222)NS(0.778)APLIHGLSDTSPVFQAEAPSAR;S(0.232)NS(0.768)APLIHGLSDTSPVFQAEAPSAR 193.02 3.80E-27 173948000 5181.6 4146.3 4938.5 4045 6368.6 5918.4 6138.7 5227.5 4282.4 3733.5 TRUE FALSE 4740.87771 3876.375116 4603.288379 4356.546601 6114.925176 6253.494693 5729.198524 5181.796519 4727.570805 4196.034166 1.129847261 0.923818769 1.097056934 1.038253367 1.457310626 1.490334551 1.365384145 1.234927151 1.126675956 1 12.03481071 -6.238254727 23.73993134 1.305727148 1.041985968 0.366058358 0.146931043 421.5547361 431650.3567 0.04446352 0.057354809 5.78E-07 6.238254727 -0.26374118 SNS(ph)APLIHGLSDTSPVFQAEAPSAR ddPTM_A459_MK2206_30min_R2 4 SNSAPLIHGLSDTSPVFQAEAPSAR 25 0 Q96E09 Q96E09 FAM122A Protein FAM122A 1 S(0.184)NS(0.816)APLIHGLSDTSPVFQAEAPSAR;S(0.149)NS(0.851)APLIHGLSDTSPVFQAEAPSAR;S(0.164)NS(0.836)APLIHGLSDTSPVFQAEAPSAR;S(0.172)NS(0.828)APLIHGLSDTSPVFQAEAPSAR 128.01 4.44E-08 213093000 320728 426180 387470 473877 445959 448090 452912 338611 380396 434350 TRUE FALSE 345283.1823 405016.5209 400388.0564 435159.7332 428448.4089 465142.3789 393444.1104 382868.6203 413482.1565 420177.1951 0.821756122 0.963918379 0.952902873 1.035657666 1.019685061 1.107014813 0.936376641 0.911207521 0.984066154 1 18.68063834 -4.337292191 1.432419574 0.995854363 0.499654839 0.494700866 0.051963083 3.532941582 2.806865063 0.016212683 3.436048782 4.60E-05 4.337292191 -0.496199524 SNS(ph)DESNFSEK ddPTM_A459_MK2206_30min_R1 1 SNSDESNFSEK 11 0 O95999;A0A087WWW9 O95999 BCL10 B-cell lymphoma/leukemia 10 1 S(0.029)NS(0.951)DES(0.02)NFSEK 159.12 0.00058219 5037500 2326.9 2342.1 2372.1 2363.9 2042.6 1544.4 2215.9 2141.2 2077.5 1853.4 TRUE FALSE 2128.984936 2189.628864 2211.088461 2545.967988 1961.238917 1631.842593 2068.081354 2122.479714 2293.463559 2083.013184 1.022069832 1.051183392 1.061485581 1.222252459 0.941539368 0.783404832 0.99283162 1.018946846 1.101031706 1 11.02445626 -6.327057088 24.998408 0.965422231 1.084547816 0.28231835 0.0902295 274.6632087 104637.5733 0.030203926 0.034248037 4.71E-07 6.327057088 0.119125585 SNS(ph)DESNFSEK ddPTM_A459_MK2206_30min_R2 1 SNSDESNFSEK 11 0 O95999;A0A087WWW9 O95999 BCL10 B-cell lymphoma/leukemia 10 1 S(0.086)NS(0.913)DES(0.001)NFSEK 85.837 0.040894 0 9918.7 12133 11729 15778 14239 10800 17002 11828 9852 9312.5 TRUE FALSE 10678.0833 11530.49286 12120.03901 14488.88693 13679.90531 11211.00157 14769.61698 13373.96021 10708.90915 9008.633888 1.185316601 1.279938002 1.345380349 1.608333418 1.518532719 1.244472992 1.639495751 1.484571399 1.188738413 1 13.13709263 -8.491026448 3.711379662 1.001894655 1.417338407 0.461510082 0.144684388 0.181818702 5.936723265 0.147155398 0.038742581 3.23E-09 8.491026448 0.415443752 SNS(ph)DNNLNASAPDWAVCSTATSHR ddPTM_A459_MK2206_30min_R1 2 SNSDNNLNASAPDWAVCSTATSHR 24 0 Q9UPX8;Q9UPX8-3;A0A2R8Y2H5;A0A087X158 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.118)NS(0.882)DNNLNASAPDWAVCSTATSHR;S(0.289)NS(0.711)DNNLNASAPDWAVCSTATSHR 199.4 6.06E-31 46022000 1096.95 898.21 1112.78 918.41 1154.37 1046.19 1133.75 970.44 676 831.2 TRUE FALSE 1003.648642 839.7363657 1037.247594 989.1460973 1108.388998 1105.424374 1058.119606 961.9555454 746.2726191 934.1753312 1.074368599 0.898906595 1.11033503 1.058844164 1.186489261 1.18331574 1.132677743 1.029737688 0.798857125 1 9.867549538 -8.051662275 6.2439122 0.901316773 1.090765783 0.425835614 0.088461572 0.224790501 20.18695662 0.063444699 0.024063651 8.88E-09 8.051662275 0.18944901 SNS(ph)DVTISDIDAEDVLDQNAVNPNTGAALHR ddPTM_A459_MK2206_30min_R1 1 SNSDVTISDIDAEDVLDQNAVNPNTGAALHR 31 0 Q9P2F8 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 S(0.124)NS(0.512)DVT(0.364)ISDIDAEDVLDQNAVNPNTGAALHR 152.4 1.94E-20 14532000 805.14 743.06 500.95 465.27 797.78 700.12 630.83 682.47 714.03 584.05 TRUE FALSE 736.658615 694.6866589 466.9469097 501.105176 766.0027333 739.7601894 588.7484817 676.5032367 788.2559737 656.4065234 1.122259741 1.058317726 0.711368478 0.763406758 1.166963926 1.126984823 0.896926616 1.030616261 1.200865539 1 9.358445766 -6.271862256 24.91170303 1.066079954 0.909696018 0.231842818 0.139390585 1142.218098 2730008.231 0.046920097 0.053771443 5.35E-07 6.271862256 -0.156383937 SNS(ph)DVTISDIDAEDVLDQNAVNPNTGAALHR ddPTM_A459_MK2206_30min_R2 3 SNSDVTISDIDAEDVLDQNAVNPNTGAALHR 31 0 Q9P2F8 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 S(0.217)NS(0.757)DVT(0.025)IS(0.001)DIDAEDVLDQNAVNPNTGAALHR;S(0.19)NS(0.76)DVT(0.048)IS(0.002)DIDAEDVLDQNAVNPNTGAALHR;S(0.165)NS(0.828)DVT(0.007)ISDIDAEDVLDQNAVNPNTGAALHR 177.88 7.27E-34 19957100 32459.1 36847 30102.8 36815.1 33398.2 33969 48888 26334.9 28117.8 37544.5 TRUE FALSE 34944.19365 35017.23156 31106.41233 33807.18856 32086.81886 35261.7141 42468.94687 29776.96185 30563.43542 36319.42604 0.962135074 0.964146061 0.856467619 0.930829373 0.883461617 0.970877515 1.169317677 0.819863227 0.841517578 1 15.14845378 -5.093912398 16.07090718 0.933734662 0.963405372 0.014597504 0.095525405 16.12001625 2737.965751 0.0254629 0.067377751 8.06E-06 5.093912398 0.02967071 SNS(ph)EDKLNSK ddPTM_A459_MK2206_30min_R2 1 SNSEDKLNSK 10 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 S(0.004)NS(0.996)EDKLNSK 120.6 0.023911 4924900 15763 14183 12936 13322 16601 10384 16916 18358 14734 20487 TRUE FALSE 16969.8274 13478.69284 13367.27978 12233.54999 15949.16133 10779.1704 14694.90888 20757.45363 16015.53669 19818.51087 0.856261478 0.680106237 0.67448457 0.61727897 0.804760834 0.543894063 0.741473917 1.047377059 0.808109993 1 14.27456094 -7.637997575 6.157617677 0.943754269 0.691762328 0.567129853 0.100182757 0.146934792 7.329256355 0.045691386 0.025971462 2.30E-08 7.637997575 -0.251991941 SNS(ph)EVEDVGPTSHNR ddPTM_A459_MK2206_30min_R1 2 SNSEVEDVGPTSHNR 15 0 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 S(0.031)NS(0.969)EVEDVGPTSHNR;S(0.225)NS(0.775)EVEDVGPTSHNR 222.11 1.46E-09 14845100 4663.2 4037.2 4195.2 3266.25 3964.8 3178.59 3515.5 3425.77 2830.03 2774.72 TRUE FALSE 4266.570353 3774.377546 3910.441512 3517.817141 3806.87362 3358.559019 3280.987409 3395.818854 3124.221746 3118.473262 1.368159992 1.210328654 1.253960251 1.128057497 1.220749162 1.076988237 1.052113369 1.088936338 1.001843365 1 11.60662417 -1.522878745 0.195878955 0.968164277 2.728990272 0.844578282 0.044887885 19.05723945 0.227217498 0.082458601 10.23406429 0.03 1.522878745 1.760825994 SNS(ph)EVEDVGPTSHNR ddPTM_A459_MK2206_30min_R2 1 SNSEVEDVGPTSHNR 15 0 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 S(0.244)NS(0.756)EVEDVGPTSHNR 136.81 0.00026736 18350000 152600 122720 128830 134070 107720 124160 136180 100420 94655 96748 TRUE FALSE 164283.1733 116625.9033 133125.1279 123116.0521 103490.3716 128884.9958 118299.4024 113545.2388 102887.9208 93591.12068 1.755328627 1.246121453 1.422411944 1.315467228 1.105771261 1.377107089 1.264002413 1.213205248 1.099334211 1 16.51408404 -1.522878745 0.663456918 1.202502808 48.26442823 0.617810518 0.12428531 166.7430056 1.022247932 0.049854766 11559.69509 0.03 1.522878745 47.06192542 SNS(ph)FIGVPNGEVEMPLK ddPTM_A459_MK2206_30min_R2 2 SNSFIGVPNGEVEMPLK 17 0 Q9H7E2-2;Q9H7E2;Q9H7E2-3 Q9H7E2-2 TDRD3 Tudor domain-containing protein 3 1 S(0.089)NS(0.911)FIGVPNGEVEMPLK;S(0.236)NS(0.764)FIGVPNGEVEMPLK 102.79 0.0034408 5747100 28963 28325 31512 29736 31955 35859 40517 29205 28556 37408 TRUE FALSE 31180.42955 26918.42169 32562.59435 27306.47368 30700.28614 37223.63937 35197.06923 33022.19378 31039.74926 36187.38002 0.861638216 0.743862133 0.899832879 0.75458554 0.84836996 1.028635932 0.972633808 0.912533423 0.857750665 1 15.14319904 -6.588700674 7.409649594 0.949513278 0.814167745 0.545789607 0.061022524 0.182332341 17.31871935 0.020038443 0.020045006 2.58E-07 6.588700674 -0.135345533 SNS(ph)FNNPLGNR ddPTM_A459_MK2206_30min_R2 2 SNSFNNPLGNR 11 0 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 S(0.433)NS(0.567)FNNPLGNR;S(0.417)NS(0.583)FNNPLGNR 135.04 0.0015303 40011000 54003 70770 58688 70933 80331 59365 83555 56488 57601 64890 TRUE FALSE 58137.5112 67255.66471 60644.62863 65137.547 77176.80131 61624.17667 72584.12813 63871.17555 62611.03086 62772.64461 0.926159979 1.071416779 0.966099628 1.037674092 1.229465507 0.981704324 1.156301898 1.017500154 0.997425411 1 15.93784837 -3.66884713 1.037424055 1.06079874 1.74E-16 0.16129532 0.079905177 28.22745659 4.109648308 0.02475543 56.31064389 0.000214365 3.66884713 -1.06079874 SNS(ph)FSDER ddPTM_A459_MK2206_30min_R1 2 SNSFSDER 8 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.015)NS(0.575)FS(0.41)DER;S(0.427)NS(0.528)FS(0.045)DER 116.84 0.0085583 6790800 6489.8 6422.3 6262.3 5122.5 5227.4 6708 8024.7 6416.6 6253.9 7795.7 TRUE FALSE 5937.808431 6004.207103 5837.232524 5517.035838 5019.181589 7087.801163 7489.386905 6360.500343 6904.015285 8761.490171 0.677716726 0.685295194 0.666237411 0.629691494 0.572868484 0.808972107 0.854807431 0.72596102 0.787995552 1 13.09696055 -6.816746804 9.217256694 0.820104084 0.648805984 0.628505047 0.072231506 0.2436364 38.11214108 0.025013532 0.022100302 1.52E-07 6.816746804 -0.1712981 SNS(ph)FSDER ddPTM_A459_MK2206_30min_R2 1 SNSFSDER 8 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.002)NS(0.774)FS(0.224)DER 136.81 0.0025712 696100000 574270 478950 549090 594440 587980 535990 671560 580010 551340 723210 TRUE FALSE 618236.5527 455166.0395 567396.3865 545872.3505 564892.9508 556387.475 583383.3653 655819.2985 599294.5566 699611.7169 0.883685247 0.65059808 0.811016129 0.780250441 0.807437808 0.795280384 0.833867346 0.937404681 0.856610234 1 19.41619493 -8.063232492 0.505031953 0.99764324 0.764240024 0.546528966 0.060404101 0.604648274 0.384076 0.060492432 0.035637069 8.65E-09 8.063232492 -0.233403217 SNS(ph)GLGGEVSGVMSKPNVDPQPWFQDGPK ddPTM_A459_MK2206_30min_R1 1 SNSGLGGEVSGVMSKPNVDPQPWFQDGPK 29 1 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 S(0.156)NS(0.471)GLGGEVS(0.35)GVMS(0.022)KPNVDPQPWFQDGPK 89.08 1.49E-06 16195000 1544.8 1303.5 1567.1 1321.6 1409.7 1388.1 1204.8 1560.5 1563.2 1023.5 TRUE FALSE 1413.406648 1218.641913 1460.729618 1423.389861 1353.548664 1466.693022 1124.42999 1546.856713 1725.700234 1150.298907 1.228729889 1.059413258 1.269869605 1.237408688 1.176692993 1.275053826 0.977511135 1.344743269 1.500218963 1 10.16779308 SNS(ph)GLGGEVSGVMSKPNVDPQPWFQDGPK ddPTM_A459_MK2206_30min_R2 3 SNSGLGGEVSGVMSKPNVDPQPWFQDGPK 29 1 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 S(0.277)NS(0.722)GLGGEVS(0.001)GVMSKPNVDPQPWFQDGPK;S(0.317)NS(0.676)GLGGEVS(0.004)GVMS(0.004)KPNVDPQPWFQDGPK;S(0.443)NS(0.543)GLGGEVS(0.007)GVMS(0.007)KPNVDPQPWFQDGPK 70.943 0.00015519 19575300 43331 50328 54365 49333 53044 37710.5 60354 38951 44128.6 64712 TRUE FALSE 46648.45468 47828.7847 56177.50197 45302.33609 50961.22604 39145.5995 52429.4473 44042.02944 47966.82586 62600.45274 0.745177593 0.764032569 0.897397695 0.723674256 0.814071206 0.625324543 0.83752505 0.703541708 0.766237683 1 15.93388547 -8.63340132 19.26193016 1 0.764501224 0.497535597 0.071118077 39883.85411 6950970.85 0.066123776 0.017073085 2.33E-09 8.63340132 -0.235498776 SNS(ph)GRELTDEEILASVMIK ddPTM_A459_MK2206_30min_R1 2 SNSGRELTDEEILASVMIK 19 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 S(0.061)NS(0.929)GRELT(0.01)DEEILASVMIK;S(0.014)NS(0.713)GRELT(0.274)DEEILASVMIK 75.106 0.017704 12297000 7348.6 7435.1 6681.1 6942.2 7875.2 6470.5 6460.1 7918.5 4953.2 3492.3 TRUE FALSE 6723.562981 6951.073639 6227.605547 7476.889447 7561.514108 6836.854118 6029.158516 7849.269389 5468.102865 3924.95249 1.713030412 1.770995613 1.586670301 1.904963045 1.926523729 1.741894746 1.536109936 1.999838064 1.39316409 1 11.93845948 -8.526385233 4.772760626 1.000611222 1.765270798 0.762049815 0.137610681 0.071022071 6.091105127 0.131465052 0.034241197 2.98E-09 8.526385233 0.764659575 SNS(ph)IQQMEQLNR ddPTM_A459_MK2206_30min_R2 1 SNSIQQMEQLNR 12 0 A0A2R8Y6F3;Q9P2P5;A0A2R8YE75 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 S(0.035)NS(0.965)IQQMEQLNR 136.57 0.0013965 7416300 11655 16985 20158 18500 17386 14944 21624 13314 16949 16335 TRUE FALSE 12547.31576 16141.5496 20830.05766 16988.49082 16703.33828 15512.70439 18784.74282 15054.18551 18423.19338 15801.99029 0.794033886 1.021488389 1.31819203 1.075085512 1.057040156 0.981693072 1.188758029 0.952676545 1.165878035 1 13.94781866 -4.811355808 4.157511537 1.09265555 0.778629112 0.423161581 0.104124978 0.190485622 6.04059729 0.025620139 0.163256133 1.54E-05 4.811355808 -0.314026438 SNS(ph)ISQIPSLEEMQQLR ddPTM_A459_MK2206_30min_R2 1 SNSISQIPSLEEMQQLR 17 0 A0A1B0GV57;Q9NYJ8 A0A1B0GV57 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 1 S(0.252)NS(0.747)IS(0.001)QIPSLEEMQQLR 87.669 0.010502 2000300 2768.7 4414.6 3808.6 5477 2404.9 4325.5 3982.5 3846.5 4537.8 3545.4 TRUE FALSE 2980.673801 4195.377383 3935.576823 5029.51158 2310.471542 4490.109934 3459.592966 4349.250757 4932.489642 3429.713888 0.869073601 1.223244131 1.147494208 1.46645223 0.673663057 1.309179156 1.008711828 1.268108915 1.438163591 1 11.74387251 -7.789858512 23.96470433 1.264852526 1.112057215 0.060886569 0.2324169 370.9657346 312812.8187 0.120893934 0.058097709 1.62E-08 7.789858512 -0.152795311 SNS(ph)LDKHQQSSTLGNSVVR ddPTM_A459_MK2206_30min_R1 1 SNSLDKHQQSSTLGNSVVR 19 1 Q6ZSL5;A0A088AWN3;A0A0A0MSY4;Q9BZ29-3;Q9BZ29-5;Q9BZ29;Q9BZ29-4;X6RGR3 Q6ZSL5 DOCK9 Dedicator of cytokinesis protein 9 1 S(0.096)NS(0.893)LDKHQQS(0.005)S(0.002)T(0.002)LGNS(0.001)VVR 55.031 0.032329 6843900 694.16 539.41 466.48 651.01 884.37 687.06 716.81 697.64 531.1 525.2 TRUE FALSE 635.1180468 504.294311 434.8166373 701.150903 849.1436702 725.9607435 668.9929128 691.540607 586.3097456 590.2657411 1.075986632 0.854351313 0.73664556 1.18785634 1.438578612 1.229887986 1.133375811 1.171575036 0.993297942 1 9.2052208 -5.779967669 24.97110683 1.184880606 0.885530211 0.440496679 0.14125303 200.9559198 270833.3911 0.041406773 0.06154078 1.66E-06 5.779967669 -0.299350395 SNS(ph)LDKHQQSSTLGNSVVR ddPTM_A459_MK2206_30min_R2 3 SNSLDKHQQSSTLGNSVVR 19 1 Q6ZSL5;A0A088AWN3;A0A0A0MSY4;Q9BZ29-3;Q9BZ29-5;Q9BZ29;Q9BZ29-4;X6RGR3 Q6ZSL5 DOCK9 Dedicator of cytokinesis protein 9 1 S(0.077)NS(0.923)LDKHQQSSTLGNSVVR;S(0.256)NS(0.74)LDKHQQS(0.002)S(0.001)T(0.001)LGNS(0.001)VVR;S(0.194)NS(0.805)LDKHQQSSTLGNSVVR 64.346 0.014155 15398000 27794.4 44628 28287.4 40182.3 42759 37172.2 38643 28047.7 30982 39979 TRUE FALSE 29922.36063 42411.83842 29230.4878 36899.27755 41080.06681 38586.81412 33569.12768 31713.63069 33676.75836 38674.4885 0.773697644 1.096636053 0.755808 0.954098657 1.06220065 0.997733018 0.86799151 0.820014224 0.870774499 1 15.23909459 -10.41455021 4.217599263 1.000001665 0.916216026 0.053568674 0.110286244 153240595.7 371683511.9 4316.270565 0.027407156 3.85E-11 10.41455021 -0.083785639 SNS(ph)LNNGQPK ddPTM_A459_MK2206_30min_R2 2 SNSLNNGQPK 10 0 O60333-3 O60333-3 KIF1B Kinesin-like protein KIF1B 1 S(0.008)NS(0.992)LNNGQPK;S(0.412)NS(0.588)LNNGQPK 132.14 0.0024902 55551000 196505 227310 189800 222900 268080 236290 362780 299280 302290 358570 TRUE FALSE 211549.5739 216022.1159 196127.8373 204688.357 257553.8322 245282.1815 315146.5502 338396.9236 328582.6378 346869.8903 0.609881629 0.622775634 0.565421914 0.590101253 0.742508472 0.707130219 0.908543979 0.97557307 0.947279216 1 18.40403509 -7.115408633 1.049254864 0.992573429 0.596656828 0.948503594 0.037420791 0.106337481 0.235274428 0.025078623 0.0161823 7.67E-08 7.115408633 -0.395916602 SNS(ph)LPHPAGGGK ddPTM_A459_MK2206_30min_R1 1 SNSLPHPAGGGK 12 0 G5E9A7;Q09019 G5E9A7 DMWD Dystrophia myotonica WD repeat-containing protein 1 S(0.001)NS(0.999)LPHPAGGGK 132.24 0.0019111 12065000 8981.6 8737.2 8934.9 8390.9 9240.3 6898.1 7688.3 8959.6 7538.4 6122.3 TRUE FALSE 8217.667756 8168.406692 8328.423882 9037.168572 8872.239284 7288.664461 7175.427535 8881.267162 8322.043656 6880.776745 1.194293618 1.187134388 1.210390075 1.313393663 1.289424089 1.059279313 1.042822315 1.290736132 1.209462822 1 12.74835572 -6.753454089 24.99999641 1.133778759 1.238601422 0.311272635 0.086987621 275.812352 863499.8326 0.030981792 0.030463573 1.76E-07 6.753454089 0.104822663 SNS(ph)LPHSAVSNAGSK ddPTM_A459_MK2206_30min_R1 2 SNSLPHSAVSNAGSK 15 0 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 S(0.001)NS(0.959)LPHS(0.04)AVSNAGSK;SNS(0.991)LPHS(0.006)AVS(0.002)NAGSK 228.26 9.42E-14 14395900 7002.9 4490 5452.4 3989.3 5858.8 6183.2 6705.2 6562.1 4616.9 4868.9 TRUE FALSE 6407.266581 4197.700184 5082.306279 4296.556577 5625.43159 6533.287441 6257.908342 6504.728252 5096.843277 5472.09609 1.170898039 0.767110101 0.928767733 0.785175645 1.028021346 1.193927762 1.143603518 1.188708704 0.931424301 1 12.41787785 -6.513401815 20.58458977 1.107069807 0.904057935 0.299612556 0.127499466 47.22226382 102572.2821 0.039258068 0.041546486 3.07E-07 6.513401815 -0.203011872 SNS(ph)LPHSAVSNAGSK ddPTM_A459_MK2206_30min_R2 1 SNSLPHSAVSNAGSK 15 0 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 SNS(0.765)LPHS(0.231)AVS(0.005)NAGSK 190.8 2.79E-05 21208000 23563 32326 25300 32442 26360 25750 35262 28394 32079 29952 TRUE FALSE 25367.0014 30720.73785 26143.48937 29791.38482 25324.97395 26729.93429 30632.05704 32105.19329 34869.17343 28974.66869 0.87548892 1.06026192 0.902287776 1.028187247 0.874038431 0.922527694 1.057201287 1.108043499 1.203436485 1 14.82250454 -7.451626541 3.364289243 1.114177936 0.948233975 0.499499955 0.073377552 0.198406316 4.364643968 0.033456762 0.020434988 3.53E-08 7.451626541 -0.165943961 SNS(ph)LVSTFTMEK ddPTM_A459_MK2206_30min_R2 2 SNSLVSTFTMEK 12 0 Q9HB21 Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 1 S(0.007)NS(0.993)LVSTFTMEK;S(0.003)NS(0.978)LVS(0.014)T(0.003)FT(0.001)MEK 111.64 0.0067116 3493700 26160 31828 26900 26721 23730 20483.4 27404 19817 20896.9 26848 TRUE FALSE 28162.82971 30247.4678 27796.83257 24537.80882 22798.24097 21262.91014 23805.82188 22407.14994 22714.47459 25971.95196 1.084355529 1.164620505 1.070263514 0.94478108 0.877802369 0.818687412 0.916597332 0.862744163 0.874577106 1 14.66466683 -5.781759207 2.386807682 0.883242048 1.12524383 0.802014655 0.048060944 0.108154887 1.256895556 0.013594595 0.024761643 1.65E-06 5.781759207 0.242001782 SNS(ph)MLELAPK ddPTM_A459_MK2206_30min_R1 1 SNSMLELAPK 10 0 A6PVU7;Q9P2M7-2;Q9P2M7;A2A3M4 A6PVU7 CGN Cingulin 1 S(0.04)NS(0.96)MLELAPK 111.31 0.008925 6169000 3248.8 3061.7 3483.1 3166.1 3401.1 2461.4 3156.8 3048.5 2901.4 2484.7 TRUE FALSE 2972.4725 2862.382774 3246.676876 3409.953571 3265.626985 2600.762341 2946.215632 3021.847286 3203.010913 2792.523395 1.064439605 1.025016578 1.162631935 1.221101165 1.169417951 0.931330547 1.055037046 1.08212067 1.146995194 1 11.44735365 SNS(ph)MLELAPK ddPTM_A459_MK2206_30min_R2 1 SNSMLELAPK 10 0 A6PVU7;Q9P2M7-2;Q9P2M7;A2A3M4 A6PVU7 CGN Cingulin 1 S(0.034)NS(0.966)MLELAPK 97.69 0.020361 3617100 32749 31580 27986 37773 34577 37332 36766 29812 35183 38470 TRUE FALSE 35256.28862 30011.78312 28919.03927 34686.82507 33219.33324 38752.69542 31938.58004 33708.53076 38243.15374 37214.72705 0.947374639 0.8064491 0.777085889 0.932072537 0.892639444 1.041326875 0.858224218 0.90578471 1.027634938 1 15.18358603 -5.885039772 7.234922426 0.945788111 0.840296532 0.337312387 0.068917816 0.261102292 15.50579248 0.019339879 0.028853218 1.30E-06 5.885039772 -0.105491579 SNS(ph)PGTASSGSSR ddPTM_A459_MK2206_30min_R2 3 SNSPGTASSGSSR 13 0 H0YAP0;Q96GY0 H0YAP0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A 1 S(0.11)NS(0.866)PGT(0.024)ASSGSSR;S(0.074)NS(0.851)PGT(0.074)ASSGSSR;S(0.002)NS(0.966)PGT(0.027)AS(0.006)SGSSR 156.72 0.00036515 17040800 29390.3 19754.3 19435.9 31288.1 32673.8 21038.6 36327.9 56174 30179.7 29708.8 TRUE FALSE 31640.44397 18773.33019 20083.88321 28731.76214 31390.86244 21839.23867 31558.00309 63516.13467 32804.67575 28739.40429 1.10094293 0.653226142 0.698827401 0.999734088 1.092258633 0.759905753 1.098074364 2.210071372 1.141452879 1 14.81074254 -7.535325997 24.99842436 1.536272008 0.88402958 0.359586631 0.332302643 204.8412908 411387.4076 0.147040991 0.084962993 2.92E-08 7.535325997 -0.652242428 SNS(ph)PLPVPPSK ddPTM_A459_MK2206_30min_R1 6 SNSPLPVPPSK 11 0 Q13247-3;Q13247 Q13247-3 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.006)NS(0.994)PLPVPPSK;S(0.074)NS(0.925)PLPVPPS(0.001)K;S(0.001)NS(0.998)PLPVPPSK;S(0.001)NS(0.999)PLPVPPSK;S(0.158)NS(0.842)PLPVPPSK;S(0.098)NS(0.902)PLPVPPSK 161.49 0.00055892 1143786000 91937.4 95550.3 93430.2 74130.5 84224.8 78416.7 104736 94156 109207 115484 TRUE FALSE 84117.64135 89329.9581 87088.41834 79840.04395 80869.94787 82856.58579 97749.25254 93332.80402 120559.4585 129791.0298 0.648100577 0.688259876 0.670989501 0.615143004 0.623078097 0.638384532 0.753127953 0.719100574 0.92887358 1 16.98583115 -8.235447785 1.23446427 1.007138549 0.650890216 0.923966564 0.03466368 0.109884425 0.327628592 0.033309473 0.010763582 5.82E-09 8.235447785 -0.356248334 SNS(ph)PLPVPPSK ddPTM_A459_MK2206_30min_R2 6 SNSPLPVPPSK 11 0 Q13247-3;Q13247 Q13247-3 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.005)NS(0.995)PLPVPPSK;S(0.279)NS(0.623)PLPVPPS(0.097)K;S(0.258)NS(0.736)PLPVPPS(0.007)K;S(0.39)NS(0.606)PLPVPPS(0.004)K;S(0.014)NS(0.976)PLPVPPS(0.01)K;S(0.142)NS(0.854)PLPVPPS(0.004)K 113.54 0.0070392 1974001000 4046331 3841545 3787747 3777447 3594790 3020446 4259241 3506133 3413826 4368795 TRUE FALSE 4356121.212 3650779.461 3914028.594 3468817.497 3453640.482 3135391.189 3699997.54 3964396.621 3710754.415 4226241.577 1.030731711 0.863835963 0.926125145 0.820780695 0.817189557 0.741886409 0.87548179 0.93804307 0.878027048 1 22.01094381 -10.5352231 10.88672115 0.999998819 0.872342553 0.196136011 0.074249623 0 0 0.075228584 0.018245612 2.92E-11 10.5352231 -0.127656266 SNS(ph)QTLSDAPFTTCPEGPAR ddPTM_A459_MK2206_30min_R1 1 SNSQTLSDAPFTTCPEGPAR 20 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 S(0.253)NS(0.481)QT(0.253)LS(0.013)DAPFTTCPEGPAR 61.139 0.027252 3653900 278.52 326.14 316.72 276.29 296.25 271.47 227.14 369.87 396.93 230.19 TRUE FALSE 254.8304114 304.9082267 295.2219288 297.5699037 284.4497352 286.8403968 211.987905 366.6362656 438.1922939 258.707675 0.985012955 1.178582068 1.141140976 1.15021676 1.099502499 1.108743282 0.819410963 1.417183566 1.693773847 1 8.015179045 -7.798361502 24.70216383 1.416609903 1.081769798 0.345344135 0.18633374 150.412941 100629.2696 0.096713826 0.046462047 1.59E-08 7.798361502 -0.334840105 SNS(ph)QTLSDAPFTTCPEGPAR ddPTM_A459_MK2206_30min_R2 1 SNSQTLSDAPFTTCPEGPAR 20 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 S(0.289)NS(0.706)QT(0.005)LSDAPFTTCPEGPAR 167.51 2.99E-09 7727600 17498 20910 26357 27310 18154 17432 18231 15389 18981 24424 TRUE FALSE 18837.66033 19871.63981 27235.72923 25078.68564 17441.18274 18095.38698 15837.2478 17400.39514 20631.93307 23627.04688 0.797292206 0.841054741 1.152735226 1.061439704 0.738187165 0.76587595 0.67030162 0.736460855 0.873233679 1 14.5281517 -6.27181283 24.92016817 0.776240806 0.967953973 0.280702629 0.12725935 816.041816 1960375.672 0.041083014 0.047080776 5.35E-07 6.27181283 0.191713167 SNS(ph)REHLGGGSESDNWR ddPTM_A459_MK2206_30min_R2 1 SNSREHLGGGSESDNWR 17 1 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(0.255)NS(0.745)REHLGGGSESDNWR 59.606 0.034666 92923000 16843 22825 16816 15326 24231 20115 21644 16393 21060 18429 TRUE FALSE 18132.51303 21691.54369 17376.63705 14073.81677 23279.56919 20880.49042 18802.1168 18535.62139 22891.76073 17827.66324 1.017099818 1.216735104 0.974700768 0.789436988 1.305811585 1.171241017 1.054659635 1.039711214 1.2840584 1 14.12182999 -6.278907381 24.99723599 1.14160285 1.013239526 0.212638187 0.133838377 1522.428874 2178636.374 0.043004683 0.0488745 5.26E-07 6.278907381 -0.128363323 SNS(ph)SEALLVDR ddPTM_A459_MK2206_30min_R1 1 SNSSEALLVDR 11 0 Q96HB5-2;Q96HB5;Q96HB5-5;Q96HB5-3;Q96HB5-4 Q96HB5-2 CCDC120 Coiled-coil domain-containing protein 120 1 S(0.008)NS(0.902)S(0.09)EALLVDR 105.19 0.010826 0 1793 1792 1806.3 1677.5 1943.5 1626.1 1859.2 1722 1587.2 1680.5 TRUE FALSE 1640.495935 1675.340474 1683.693389 1806.701341 1866.08628 1718.168377 1735.17616 1706.944736 1752.19512 1888.693027 0.868587913 0.887036935 0.891459525 0.956588135 0.988030481 0.909712882 0.918717936 0.903770338 0.927728908 1 10.88317252 -1.522882585 0.012807233 1.712368588 3.66E-08 0.42064381 0.031452515 9433.336393 9.367511278 517.6028877 755.6576606 0.029999735 1.522882585 -1.712368552 SNS(ph)SEALLVDR ddPTM_A459_MK2206_30min_R2 2 SNSSEALLVDR 11 0 Q96HB5-2;Q96HB5;Q96HB5-5;Q96HB5-3;Q96HB5-4 Q96HB5-2 CCDC120 Coiled-coil domain-containing protein 120 1 S(0.008)NS(0.682)S(0.311)EALLVDR;S(0.002)NS(0.499)S(0.499)EALLVDR 132.65 0.0019717 6174400 19056.1 20862.8 15304.4 21093.5 18390.6 15982.2 23366 16419.3 18731.6 19060 TRUE FALSE 20515.04967 19826.78369 15814.64106 19370.09358 17668.49264 16590.41382 20298.01613 18565.35889 20360.84071 18438.07376 1.112646035 1.075317517 0.857716552 1.050548654 0.958261306 0.899791054 1.100875091 1.006903385 1.10428242 1 14.17040032 -7.291922524 24.99879595 1.053590495 0.991122115 0.123645022 0.079034059 1597.052021 1309712.512 0.033603006 0.022658047 5.11E-08 7.291922524 -0.06246838 SNS(ph)SSEAVLGQEELSAQAK ddPTM_A459_MK2206_30min_R2 3 SNSSSEAVLGQEELSAQAK 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 S(0.031)NS(0.706)S(0.204)S(0.059)EAVLGQEELSAQAK;S(0.024)NS(0.879)S(0.037)S(0.059)EAVLGQEELSAQAK;S(0.015)NS(0.971)S(0.015)SEAVLGQEELSAQAK 171.39 2.94E-09 53071000 168881 196480 176001 160902 140623 116717 137207 132722 122288 128670 TRUE FALSE 181810.6592 186723.0889 181868.7855 147755.7919 135101.4344 121158.7472 119191.5561 150069.2211 132924.3892 124471.5084 1.460660849 1.500127148 1.461127834 1.187065167 1.085400476 0.973385385 0.957581037 1.205651181 1.067910166 1 16.92545602 -5.884232204 2.342961985 1.050347977 1.488414984 0.891343542 0.066425909 0.094372869 1.053036737 0.021892593 0.036830232 1.31E-06 5.884232204 0.438067008 SNS(ph)TTQVSQPR ddPTM_A459_MK2206_30min_R1 3 SNSTTQVSQPR 11 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 S(0.001)NS(0.414)T(0.414)T(0.171)QVSQPR;SNS(0.5)T(0.5)T(0.001)QVSQPR;S(0.002)NS(0.911)T(0.085)T(0.002)QVSQPR 189.99 1.97E-05 45898500 6752.2 6059.56 6891.35 5097.14 6701.4 4768.18 6105.2 5744.77 4722.96 4723.85 TRUE FALSE 6177.889933 5665.081543 6423.584362 5489.722606 6434.469048 5038.150231 5697.933248 5694.544082 5213.928593 5309.076201 1.163646875 1.067055986 1.209925064 1.034025958 1.211975267 0.948969282 1.073243825 1.072605453 0.982078312 1 12.37424513 -6.763269843 24.99999828 1.023533751 1.131716355 0.478318831 0.063256178 46.81317622 639353.3128 0.020446495 0.018949183 1.72E-07 6.763269843 0.108182604 SNS(ph)TTQVSQPR ddPTM_A459_MK2206_30min_R2 4 SNSTTQVSQPR 11 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 S(0.026)NS(0.925)T(0.046)T(0.002)QVSQPR;SNS(0.971)T(0.029)TQVSQPR;S(0.002)NS(0.973)T(0.025)TQVSQPR;S(0.045)NS(0.891)T(0.059)T(0.005)QVSQPR 169.17 0.00043678 168208200 61199.5 50180 53658.6 61138 59669 55425 62618 137356.6 66787.7 64541.7 TRUE FALSE 65884.98077 47688.13417 55447.55094 56142.82983 57326.09525 57534.23721 54396.18138 155309.5792 72596.77342 62435.70961 1.055245166 0.763795822 0.888074329 0.899210246 0.918161988 0.921495688 0.871235095 2.487512037 1.162744427 1 15.93008378 -7.63679337 20.77009103 1.631277696 0.897561789 0.38140558 0.373615864 2.232837913 397.4889256 0.16046194 0.092642296 2.31E-08 7.63679337 -0.733715907 SNS(ph)VEKPVSSILSR ddPTM_A459_MK2206_30min_R1 1 SNSVEKPVSSILSR 14 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2;H0YJN0;Q9UI08-5 Q9UI08-4 EVL Ena/VASP-like protein 1 SNS(0.996)VEKPVS(0.003)S(0.001)ILSR 162.26 0.0013149 8650000 2324.4 2192.1 2002.4 2152.6 1889.9 1765.1 1848.8 1861.1 1871.7 1755.4 TRUE FALSE 2126.697574 2049.393892 1866.482667 2318.393625 1814.621281 1865.038437 1725.469925 1844.828599 2066.269913 1972.872205 1.077970265 1.038786946 0.946073781 1.17513624 0.919786531 0.945341737 0.874597919 0.935097871 1.047340982 1 10.94608179 -6.325998952 24.99978129 0.946076572 1.049913456 0.360137747 0.068160198 228.451733 88463.82827 0.020925484 0.023727272 4.72E-07 6.325998952 0.103836884 SNS(ph)VEKPVSSILSR ddPTM_A459_MK2206_30min_R2 1 SNSVEKPVSSILSR 14 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2;H0YJN0;Q9UI08-5 Q9UI08-4 EVL Ena/VASP-like protein 1 S(0.001)NS(0.999)VEKPVSSILSR 172.26 0.00059731 9903600 25044 30532 21500 22436 19048 20809 23491 20881 28072 23378 TRUE FALSE 26961.3879 29015.82528 22216.79927 20602.90703 18300.07981 21600.90108 20406.60348 23610.2184 30513.65182 22615.17777 1.192181117 1.283024417 0.982384463 0.911021228 0.809194603 0.95515062 0.90234106 1.043998797 1.349255448 1 14.46500372 -5.268140544 23.69935904 0.981490874 1.237602778 0.335513739 0.136102222 261.7273111 925633.1876 0.037613366 0.081509405 5.39E-06 5.268140544 0.256111904 SNS(ph)VSLVPPGSSHTLPR ddPTM_A459_MK2206_30min_R2 2 SNSVSLVPPGSSHTLPR 17 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 S(0.002)NS(0.714)VS(0.285)LVPPGSSHTLPR;SNS(0.888)VS(0.111)LVPPGS(0.001)S(0.001)HTLPR 172.93 4.78E-07 6940900 17211.4 31321 28815.3 37458 32140 39648 33040 24554 29688 22240.8 TRUE FALSE 18529.11802 29765.64468 29775.98772 34397.56158 30878.02211 41156.83242 28701.80831 27763.29211 32270.20858 21515.08452 0.861215209 1.383477934 1.383958668 1.598764883 1.435180145 1.912929154 1.334031864 1.290410553 1.499887604 1 14.39306089 -4.646559688 2.300279897 1.461926791 0.544600245 0.364823846 0.221438588 1.06614133 4.7517497 0.05665193 2.277808945 2.26E-05 4.646559688 -0.917326546 SNS(ph)WVNTGGPK ddPTM_A459_MK2206_30min_R1 4 SNSWVNTGGPK 11 0 Q96N67-2;Q96N67-6;Q96N67;A0A1B0GWE0;A0A0U1RRC1 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.007)NS(0.979)WVNT(0.014)GGPK;S(0.005)NS(0.994)WVNT(0.001)GGPK;S(0.011)NS(0.565)WVNT(0.424)GGPK;S(0.009)NS(0.655)WVNT(0.336)GGPK 167.03 0.00056067 68192900 18974.6 19328.1 20060.2 17211.2 17946.8 14948.7 18032.7 18415.2 16289.4 15776.9 TRUE FALSE 17360.71063 18069.83718 18698.56951 18536.80961 17231.94095 15795.08248 16829.77149 18254.19785 17982.74142 17731.46148 0.97909079 1.019083351 1.054541925 1.045419162 0.971828575 0.890794168 0.949147452 1.029480726 1.014171417 1 14.11402383 -4.426942442 12.6602797 0.99596512 0.702645233 0.012774701 0.046602402 888712.5264 2651930.711 0.013299193 7000170.051 3.74E-05 4.426942442 -0.293319887 SNS(ph)WVNTGGPK ddPTM_A459_MK2206_30min_R2 1 SNSWVNTGGPK 11 0 Q96N67-2;Q96N67-6;Q96N67;A0A1B0GWE0;A0A0U1RRC1 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.001)NS(0.999)WVNTGGPK 124.3 0.0036121 12158000 34302 47491 38871 38129 45270 39485 46909 37280 32669 41434 TRUE FALSE 36928.18749 45132.666 40166.93974 35013.73873 43492.47234 40987.62934 40749.79195 42152.624 35510.49057 40082.01197 0.921315714 1.126007997 1.00211885 0.873552424 1.085087055 1.02259411 1.016660341 1.051659384 0.88594581 1 15.29066731 -8.251666903 24.96174909 0.9429729 1.014100279 0.124426292 0.073527041 1210.091924 3090946.057 0.049693968 0.018274789 5.60E-09 8.251666903 0.071127379 SNSDVT(ph)ISDIDAEDVLDQNAVNPNTGAALHR ddPTM_A459_MK2206_30min_R1 1 SNSDVTISDIDAEDVLDQNAVNPNTGAALHR 31 0 Q9P2F8 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 S(0.01)NS(0.043)DVT(0.944)IS(0.003)DIDAEDVLDQNAVNPNTGAALHR 174.36 1.64E-28 17620000 1312.5 1467 1721.6 1663.7 1364 1501.7 1563.5 1568.6 1392.9 1268.5 TRUE FALSE 1200.864983 1371.498033 1604.742589 1791.838462 1309.668992 1586.724956 1459.201768 1554.885896 1537.69694 1425.651357 0.842327247 0.96201503 1.125620637 1.256856 0.918646053 1.112982462 1.023533391 1.090649469 1.078592555 1 10.4774055 -4.982602757 3.336295117 1.078785324 0.84774795 0.436383729 0.084096752 0.227124707 5.034348935 0.021617197 0.105119633 1.04E-05 4.982602757 -0.231037375 SNSFS(ph)DER ddPTM_A459_MK2206_30min_R1 2 SNSFSDER 8 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 SNS(0.21)FS(0.79)DER;SNS(0.077)FS(0.923)DER 163.84 0.00032197 909690000 24211.9 25641 23811.4 19537.7 22414.2 26873 32379 25158 27640 33168 TRUE FALSE 22152.55076 23971.76624 22195.14851 21042.49704 21521.39495 28394.52604 30219.05599 24938.04626 30513.27691 37277.10225 0.594266974 0.643069466 0.595409707 0.56448854 0.577335513 0.761714949 0.810660008 0.668991009 0.818552813 1 15.1860021 -8.445768104 0.340231196 1.033696963 0.566197247 0.804383492 0.059292889 0.759248096 0.25935423 0.127848937 0.075998928 3.58E-09 8.445768104 -0.467499716 SNSFS(ph)DER ddPTM_A459_MK2206_30min_R2 1 SNSFSDER 8 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 SNS(0.108)FS(0.892)DER 126.03 0.0049406 746720000 275840 220880 274940 289940 259050 309680 364150 273930 289240 355350 TRUE FALSE 296958.5225 209911.4204 284106.3624 266250.9745 248878.3954 321465.0894 316336.6676 309733.5915 314397.5724 343754.9586 0.863866877 0.610642596 0.826479314 0.774537117 0.723999434 0.93515768 0.920238849 0.901030178 0.914597927 1 18.391021 -6.766374329 24.98294122 0.927146463 0.756124161 0.62512899 0.067344883 79.98589586 404921.8727 0.022190057 0.020180342 1.71E-07 6.766374329 -0.171022301 SNSGLAT(ph)YSPPMGPVSER ddPTM_A459_MK2206_30min_R2 1 SNSGLATYSPPMGPVSER 18 0 H0Y465;P21359-2;P21359-6;P21359;J3KSB5;P21359-4 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 SNSGLAT(0.873)YS(0.127)PPMGPVSER 150.61 0.0014279 5738100 24105 32893 22485 30959 29928 31559 29329 22662 22645 25762 TRUE FALSE 25950.49733 31259.58145 23234.63868 28429.55067 28752.87634 32759.99986 25478.06707 25624.00121 24614.62117 24921.38805 1.04129422 1.254327463 0.932317198 1.14076915 1.153742973 1.314533516 1.0223374 1.028193179 0.987690618 1 14.6050968 -7.483985408 24.89415593 1.009818026 1.138707568 0.294332194 0.098753757 676.26413 432852.1174 0.041481413 0.027960538 3.28E-08 7.483985408 0.128889542 SNSGLATYS(ph)PPMGPVSER ddPTM_A459_MK2206_30min_R1 2 SNSGLATYSPPMGPVSER 18 0 H0Y465;P21359-2;P21359-6;P21359;J3KSB5;P21359-4 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 SNSGLAT(0.172)YS(0.828)PPMGPVSER;S(0.003)NS(0.046)GLAT(0.192)YS(0.758)PPMGPVSER 161.08 1.13E-05 10713000 2044.45 1857.5 1912.18 1647.92 2258.9 1746.96 2075.16 1942.43 1751.77 1583.16 TRUE FALSE 1870.558792 1736.576412 1782.386549 1774.843084 2168.92323 1845.871366 1936.729863 1925.447539 1933.87276 1779.293813 1.05129281 0.975991935 1.001738182 0.997498598 1.218979807 1.037417964 1.088482323 1.082141423 1.086876572 1 10.79708905 SNSGLATYS(ph)PPMGPVSER ddPTM_A459_MK2206_30min_R2 4 SNSGLATYSPPMGPVSER 18 0 H0Y465;P21359-2;P21359-6;P21359;J3KSB5;P21359-4 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 SNSGLAT(0.061)YS(0.939)PPMGPVSER;SNS(0.212)GLAT(0.289)YS(0.499)PPMGPVSER;SNS(0.001)GLAT(0.168)Y(0.005)S(0.826)PPMGPVSER;SNSGLAT(0.11)Y(0.004)S(0.886)PPMGPVSER 164.99 3.46E-06 26086800 72949 90377 83206 92317 88753 92245 98228 62641.3 75332 84211 TRUE FALSE 78534.03153 85889.0096 85980.04651 84774.40579 85268.11127 95755.44811 85330.54561 70828.73299 81884.24119 81463.20197 0.964043024 1.054328918 1.05544644 1.04064662 1.046707092 1.175444198 1.047473504 0.869456777 1.005168459 1 16.3138609 -7.615846471 9.825725545 0.953302087 1.059545081 0.358098036 0.059180532 0.331814485 32.24042698 0.027961017 0.016114029 2.42E-08 7.615846471 0.106242995 SNSLLVPDS(ph)LR ddPTM_A459_MK2206_30min_R1 2 SNSLLVPDSLR 11 0 A0A669KBK8 A0A669KBK8 1 SNSLLVPDS(1)LR;SNSLLVPDS(1)LR 79.23 0.030479 13996400 2160.73 2407.33 2527.83 2728.42 2904.77 3102.37 3065.21 2592.04 2643.45 2665.79 TRUE FALSE 1976.948567 2250.612379 2356.247943 2938.563381 2789.06686 3278.023508 2860.735434 2569.378068 2918.246087 2996.048191 0.659852059 0.751193651 0.78645195 0.980813122 0.93091522 1.094115748 0.954836255 0.857589032 0.974031758 1 11.54884511 -5.568541529 2.030346299 0.969657627 0.696465563 0.770408018 0.060257939 0.163990688 1.339987134 0.018655294 0.045365795 2.70E-06 5.568541529 -0.273192063 SNSLPHS(ph)AVSNAGSK ddPTM_A459_MK2206_30min_R1 1 SNSLPHSAVSNAGSK 15 0 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 SNS(0.01)LPHS(0.981)AVS(0.009)NAGSK 150.92 0.00025643 15621000 3649.8 2695.5 3071.6 2503.5 3661.5 3557.7 4140.4 4042.1 2756.5 2920.3 TRUE FALSE 3339.365344 2520.02246 2863.10835 2696.320004 3515.654702 3759.133899 3864.201471 4006.760346 3043.048039 3282.088811 1.017451244 0.767810564 0.87234335 0.821525607 1.071163794 1.145348013 1.177360423 1.220795834 0.927168098 1 11.68039856 -6.342003328 4.772983982 1.112050146 0.862860531 0.536039248 0.099648794 0.155769041 6.376762203 0.030604386 0.035080105 4.55E-07 6.342003328 -0.249189615 SNSLS(ph)EQLAINTSPDAVK ddPTM_A459_MK2206_30min_R2 1 SNSLSEQLAINTSPDAVK 18 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 S(0.004)NS(0.324)LS(0.673)EQLAINTSPDAVK 170.22 8.55E-08 3443200 6690.3 9257.6 10696 11921 13824 15041 25825 25538 24677 33801 TRUE FALSE 7202.514512 8797.881046 11052.5993 10947.01617 13281.2003 15613.39579 22434.14648 28875.90429 26823.36085 32698.07614 0.220273342 0.26906418 0.338019866 0.334790834 0.406176811 0.477501971 0.686099891 0.883107133 0.820334528 1 14.99691813 -7.328863398 0.7501813 0.980944617 0.262089843 0.973825545 0.043093301 0.096866235 0.105915786 0.036779965 0.022007205 4.69E-08 7.328863398 -0.718854775 down SNSLSEQLAINT(ph)SPDAVK ddPTM_A459_MK2206_30min_R1 1 SNSLSEQLAINTSPDAVK 18 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 SNSLSEQLAINT(0.5)S(0.5)PDAVK 287.31 3.19E-80 22093000 1660.1 1397.1 1916.4 1560.7 1470.5 953.43 1319.6 1350.6 1132 1283.3 TRUE FALSE 1518.899777 1306.148536 1786.320107 1680.905384 1411.926871 1007.412383 1231.571892 1338.791847 1249.675451 1442.284892 1.053120493 0.905610634 1.238534853 1.165446156 0.978951439 0.698483627 0.853903343 0.928243687 0.866455343 1 10.49414045 -6.524534966 24.97601633 0.861157763 1.086042482 0.488644112 0.106545591 46.98250603 708483.7374 0.03631883 0.0365773 2.99E-07 6.524534966 0.224884718 SNSLSEQLAINTS(ph)PDAVK ddPTM_A459_MK2206_30min_R1 1 SNSLSEQLAINTSPDAVK 18 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 SNSLSEQLAINT(0.025)S(0.975)PDAVK 313.59 9.44E-112 17956000 8839.7 8813.2 8827.9 7242.5 7648.8 6133.1 7301.8 7250.5 6997.2 6925.9 TRUE FALSE 8087.837096 8239.459078 8228.686744 7800.318605 7344.132099 6480.350822 6814.710245 7187.109643 7724.58398 7783.93278 1.039042515 1.058521356 1.057137436 1.002105083 0.943498911 0.832529135 0.875484211 0.923326273 0.992375474 1 12.92628354 -6.149579236 2.524832238 0.91517827 1.05104611 0.58017337 0.04729598 0.200494102 2.496024999 0.015826714 0.021647218 7.09E-07 6.149579236 0.135867839 SNSLSEQLAINTS(ph)PDAVK ddPTM_A459_MK2206_30min_R2 5 SNSLSEQLAINTSPDAVK 18 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 SNSLSEQLAINT(0.247)S(0.753)PDAVK;SNSLSEQLAINT(0.086)S(0.914)PDAVK;SNSLSEQLAINT(0.197)S(0.803)PDAVK;SNSLSEQLAINT(0.027)S(0.973)PDAVK;SNSLSEQLAINT(0.009)S(0.991)PDAVK 308.68 2.23E-111 45730000 233098 223225 217214 219590 251499 186687 245837 176464 190347 231919 TRUE FALSE 250944.1621 212139.9711 224455.8063 201648.7946 241623.8856 193791.5046 213558.3066 199528.4507 206903.038 224351.502 1.118531233 0.945569649 1.000464915 0.898807419 1.076988045 0.863785189 0.951891584 0.889356429 0.922227113 1 17.77540132 SNSQSDSHDEEVS(ph)PTPPNPVVK ddPTM_A459_MK2206_30min_R1 1 SNSQSDSHDEEVSPTPPNPVVK 22 0 C9J4C2;C9IZL8;C9JR00;C9JSK5;P31321 C9J4C2 PRKAR1B cAMP-dependent protein kinase type I-beta regulatory subunit 1 SNSQSDSHDEEVS(0.945)PT(0.055)PPNPVVK 96.019 0.00078859 0 855.9 715.96 733.09 696.09 1225.2 1145.6 1004.3 984.74 548.46 698.14 TRUE FALSE 783.1012105 669.3508739 683.3298933 749.7029724 1176.39769 1210.462882 937.3049794 976.130522 605.4743797 784.6308539 0.998050493 0.853077432 0.870893478 0.95548495 1.499300829 1.542716395 1.194580834 1.244063393 0.771667819 1 9.615870257 -6.080954493 9.084731893 1.236736033 0.903724 0.305788484 0.211963415 0.472222542 50.02715586 0.065651243 0.08493289 8.30E-07 6.080954493 -0.333012033 SNSQT(ph)LSDAPFTTCPEGPAR ddPTM_A459_MK2206_30min_R2 1 SNSQTLSDAPFTTCPEGPAR 20 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 S(0.002)NS(0.007)QT(0.816)LS(0.173)DAPFT(0.001)TCPEGPAR 187.04 2.98E-15 6043000 18785 20126 29619 27818 21176 23556 19779 13528 19651 27321 TRUE FALSE 20223.19404 19126.57211 30606.48268 25545.18041 20344.52384 24452.44009 17181.99354 15296.15605 21360.20846 26429.51801 0.765174531 0.723682214 1.158041651 0.966539776 0.769765224 0.925194326 0.650106201 0.578752743 0.808195157 1 14.68986249 -7.253359493 24.7770265 0.724159587 0.888328277 0.117430077 0.156949289 920.013835 2821233.821 0.062017972 0.047169789 5.58E-08 7.253359493 0.164168691 SNSS(ph)SEAVLGQEELSAQAK ddPTM_A459_MK2206_30min_R1 2 SNSSSEAVLGQEELSAQAK 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 S(0.001)NS(0.245)S(0.693)S(0.06)EAVLGQEELSAQAK;SNS(0.028)S(0.947)S(0.025)EAVLGQEELSAQAK 324.43 1.90E-135 36022000 7448.4 7674.4 6768.3 5854.2 6744.2 5560.5 5654.2 5944.6 6060.8 5670.7 TRUE FALSE 6814.874467 7174.795165 6308.886654 6305.091498 6475.564233 5875.330705 5277.018635 5892.626989 6690.841849 6373.229128 1.06929695 1.125770786 0.989904258 0.989308775 1.016057026 0.921876585 0.827997633 0.924590482 1.049835447 1 12.63780881 -5.575476149 1.033313366 0.941521927 1.111087148 0.412615711 0.061420001 0.682803137 1.256984228 0.024053108 0.096364278 2.66E-06 5.575476149 0.169565221 SNSSSEAVLGQEELS(ph)AQAK ddPTM_A459_MK2206_30min_R2 1 SNSSSEAVLGQEELSAQAK 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 S(0.004)NS(0.021)S(0.168)S(0.05)EAVLGQEELS(0.758)AQAK 148.13 3.78E-05 10593000 73311 76254 63231 70770 64085 48335 70013 57597 48820 58057 TRUE FALSE 78923.74653 72467.33724 65339.08998 64987.86462 61568.7009 50174.42229 60820.209 65125.12566 53066.27535 56162.60484 1.405272187 1.290312966 1.163391373 1.157137651 1.096257929 0.893377763 1.0829307 1.159581644 0.944868485 1 15.77732223 -4.950540879 0.705702734 1.027755229 1.584702104 0.750296244 0.073028103 1.313733738 0.579712406 0.033585234 0.563545847 1.12E-05 4.950540879 0.556946875 SNST(ph)SSMSSGLPEQDR ddPTM_A459_MK2206_30min_R2 2 SNSTSSMSSGLPEQDR 16 0 P42684-2;P42684-6;P42684-3;P42684 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 SNS(0.313)T(0.674)S(0.01)S(0.003)MSSGLPEQDR;S(0.001)NS(0.103)T(0.874)S(0.009)SMS(0.007)S(0.007)GLPEQDR 200.71 1.59E-06 16172900 27846 38764 27411 30868 31560 35516 33215 25620 29824 27663 TRUE FALSE 29977.91117 36839.03613 28324.86906 28345.98566 30320.79582 36867.58627 28853.8306 28968.62197 32418.03761 26760.35858 1.12023578 1.376627149 1.058463734 1.059252834 1.133048936 1.377694031 1.078230343 1.082519948 1.21142015 1 14.70780983 -14.52287874 0.223966537 0.137132875 1.186193646 0.15605263 0.11509675 309.111759 3.0862512 120.5331467 0.216526539 3.00E-15 14.52287874 1.049060771 SNST(ph)TQVSQPR ddPTM_A459_MK2206_30min_R1 1 SNSTTQVSQPR 11 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 SNS(0.047)T(0.874)T(0.078)QVS(0.001)QPR 127.78 0.006788 29062000 1700.9 1738.7 1914.7 1667.9 2010.7 1632.5 1350.3 1838.5 1447 1469.7 TRUE FALSE 1556.229523 1625.510314 1784.735499 1796.361947 1930.609561 1724.930739 1260.223951 1822.426188 1597.420828 1651.777532 0.942154433 0.984097606 1.080493871 1.08753262 1.168807254 1.044287567 0.762950171 1.103312131 0.967091995 1 10.68980368 -7.032327899 24.9980678 0.957900916 1.057723875 0.180748398 0.09671127 1147.844353 887585.5174 0.037886407 0.029374204 9.28E-08 7.032327899 0.099822958 SNT(ph)LDIMDGR ddPTM_A459_MK2206_30min_R1 1 SNTLDIMDGR 10 0 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915 H0Y9X0 FRYL Protein furry homolog-like 1 S(0.053)NT(0.947)LDIMDGR 140.31 0.0033497 15308000 3435.6 2827.4 3178.1 2680.9 2420.6 1998.4 2790 3282.3 3051.5 3081.9 TRUE FALSE 3143.384179 2643.335746 2962.379427 2887.383383 2324.182376 2111.547681 2603.884191 3253.603197 3368.714345 3463.709039 0.907519697 0.763151788 0.855262204 0.833610257 0.671009704 0.609620397 0.751761814 0.939340793 0.972574286 1 11.75810203 -7.824527324 4.66835631 0.975219677 0.765528146 0.558288661 0.082013664 0.173972988 7.412213432 0.051915333 0.02442499 1.50E-08 7.824527324 -0.209691531 SNT(ph)LDIMDGR ddPTM_A459_MK2206_30min_R2 2 SNTLDIMDGR 10 0 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915 H0Y9X0 FRYL Protein furry homolog-like 1 S(0.011)NT(0.989)LDIMDGR;S(0.081)NT(0.919)LDIMDGR 138.31 0.0038616 31724000 44143 41294 36834 33360 35208 35369 44395 36443 36039 38001 TRUE FALSE 47522.62202 39243.40001 38062.02718 30634.38129 33825.55701 36714.99208 38565.88317 41206.22523 39173.60708 36761.03048 1.292744556 1.067527202 1.035390648 0.833338481 0.920147139 0.99874763 1.049096901 1.120921386 1.065628644 1 15.16588959 -4.721910518 2.217556041 1.000343692 1.398279843 0.572003739 0.075247441 0.657406168 3.292073658 0.022893663 0.551880452 1.90E-05 4.721910518 0.397936151 SNT(ph)PESIAETPPAR ddPTM_A459_MK2206_30min_R1 1 SNTPESIAETPPAR 14 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(0.07)NT(0.895)PES(0.031)IAET(0.004)PPAR 104.16 0.014923 13582000 2585.3 3164.4 3011.5 2756.1 2440 2229.4 2289.3 2010.3 2218.6 1759.5 TRUE FALSE 2365.406659 2958.396985 2807.087771 2968.3753 2342.809633 2355.626701 2136.584974 1992.724159 2449.231409 1977.480144 1.196172142 1.496043839 1.419527665 1.501089813 1.18474496 1.191226475 1.080458371 1.007708808 1.238561822 1 10.94944749 -6.475357249 2.810090304 1.102494271 1.410403924 0.640733206 0.105466986 0.168612716 2.647850491 0.035182193 0.03868712 3.35E-07 6.475357249 0.307909652 SNT(ph)PESIAETPPAR ddPTM_A459_MK2206_30min_R2 1 SNTPESIAETPPAR 14 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(0.412)NT(0.584)PES(0.004)IAETPPAR 142.57 0.0012747 8935200 33887 39985 33328 40669 34564 29572 30465 26727 25325 25027 TRUE FALSE 36481.41477 37999.40304 34439.13889 37346.21261 33206.84369 30697.38318 26464.9089 30220.31067 27527.72272 24210.37104 1.506850709 1.569550627 1.422495295 1.542570849 1.371595819 1.267943524 1.093122813 1.248238229 1.137021927 1 14.56333757 -6.746776495 1.414189614 1.132026008 1.515572197 0.862897608 0.069759238 0.142004492 0.593015406 0.030878832 0.028282287 1.79E-07 6.746776495 0.383546189 SNT(ph)PILVDGK ddPTM_A459_MK2206_30min_R1 2 SNTPILVDGK 10 0 P06744-2;P06744;A0A2U3TZU2;K7EQ48;A0A0J9YXP8;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;K7EPY4;K7ERC6;K7EP41 P06744-2 GPI Glucose-6-phosphate isomerase 1 S(0.382)NT(0.618)PILVDGK;S(0.083)NT(0.917)PILVDGK 147.7 0.0019056 41530700 13952.3 15840.8 16513.1 12442.1 9897.4 9992.9 13233.7 11262.5 16492.3 17183.9 TRUE FALSE 12765.58362 14809.56104 15392.23678 13400.3927 9503.1656 10558.68936 12350.90402 11164.03315 18206.7336 19312.77126 0.660991809 0.766827341 0.79699783 0.693861721 0.492066388 0.546720573 0.639520028 0.578064794 0.942730246 1 14.23726758 -8.331633778 5.413081993 0.987471978 0.64888025 0.680313035 0.089080405 0.150805687 8.070235299 0.097291119 0.02564117 4.66E-09 8.331633778 -0.338591728 SNT(ph)PILVDGK ddPTM_A459_MK2206_30min_R2 4 SNTPILVDGK 10 0 P06744-2;P06744;A0A2U3TZU2;K7EQ48;A0A0J9YXP8;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;K7EPY4;K7ERC6;K7EP41 P06744-2 GPI Glucose-6-phosphate isomerase 1 S(0.009)NT(0.991)PILVDGK;S(0.084)NT(0.916)PILVDGK;SNT(1)PILVDGK;S(0.002)NT(0.998)PILVDGK 161.87 0.00097808 126590000 864800 755660 747550 676470 612350 463836 823090 649320 488450 789140 TRUE FALSE 931009.7529 718135.0232 772472.9439 621200.2371 588306.0622 481487.604 715017.2943 734188.3534 530934.4981 763390.4264 1.219572215 0.94071788 1.011897605 0.813738574 0.770648991 0.630722612 0.936633824 0.96174687 0.695495358 1 19.54206157 -4.248796346 0.904741104 0.827278421 1.871571804 0.477628109 0.118745011 4.461135489 1.464492584 0.041088309 5.785322291 5.64E-05 4.248796346 1.044293383 SNT(ph)PILVDGKDVMPEVNK ddPTM_A459_MK2206_30min_R1 1 SNTPILVDGKDVMPEVNK 18 1 P06744-2;P06744;A0A2U3TZU2;K7EQ48;A0A0J9YXP8;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;K7EPY4;K7ERC6;K7EP41 P06744-2 GPI Glucose-6-phosphate isomerase 1 S(0.053)NT(0.947)PILVDGKDVMPEVNK 87.729 0.009371 43780000 4066.4 4516.3 4669.2 4034.3 3861.2 3011.9 3297.9 4001.2 3492.3 2772 TRUE FALSE 3720.531326 4222.288049 4352.267713 4345.022485 3707.400228 3182.431175 3077.903108 3966.21793 3855.337082 3115.416288 1.194232482 1.355288558 1.397010002 1.394684397 1.190017605 1.021510733 0.987958855 1.273094047 1.237503026 1 11.60520924 -6.441260914 4.636610253 1.112760559 1.33945394 0.527213343 0.102971389 0.197219998 7.566052064 0.03526145 0.039585179 3.62E-07 6.441260914 0.226693381 SNTACDGDKES(ph)EVEDVETDSGNSPEDLRK ddPTM_A459_MK2206_30min_R2 2 SNTACDGDKESEVEDVETDSGNSPEDLRK 29 2 Q7Z3K6-4;Q7Z3K6-3;Q7Z3K6;Q7Z3K6-2 Q7Z3K6-4 MIER3 Mesoderm induction early response protein 3 1 S(0.011)NT(0.026)ACDGDKES(0.945)EVEDVET(0.017)DS(0.001)GNSPEDLRK;S(0.006)NT(0.018)ACDGDKES(0.975)EVEDVET(0.001)DSGNSPEDLRK 80.944 1.01E-05 24844000 88747 90708 88863 79899 83548 44279 97023 75559 68776 97603 TRUE FALSE 95541.53855 86203.57262 91825.64807 73370.99612 80267.48572 45964.06837 84283.76355 85434.82073 74758.01216 94418.2221 1.011897242 0.912997202 0.972541592 0.777085127 0.850127062 0.486813534 0.892664167 0.904855216 0.791775258 1 16.5267777 -5.758636996 24.96665984 0.80185087 0.960530567 0.219991519 0.128629792 106.5460767 949205.0762 0.035764674 0.058595936 1.74E-06 5.758636996 0.158679696 SNTAGS(ph)QSQVETEA ddPTM_A459_MK2206_30min_R1 1 SNTAGSQSQVETEA 14 0 Q02790 Q02790 FKBP4 "Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed" 1 SNTAGS(0.91)QS(0.089)QVETEA 99.834 0.01417 0 1871.1 2048.6 1692.9 1406.3 1661.4 1643.2 1647.2 1377.7 1447.6 1600 TRUE FALSE 1711.953119 1915.235768 1577.990665 1514.61347 1595.22292 1736.236564 1537.318293 1365.654914 1598.0832 1798.220079 0.952026473 1.065073063 0.877529221 0.842284817 0.887112172 0.965530629 0.854911093 0.759448151 0.888702789 1 10.81235388 -5.278446903 23.9127265 0.87628011 1.008549755 0.347895378 0.067228917 408.9096271 574930.6949 0.017648565 0.036914084 5.27E-06 5.278446903 0.132269645 SNTEPQSPPIAS(ph)PK ddPTM_A459_MK2206_30min_R1 1 SNTEPQSPPIASPK 14 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 SNTEPQSPPIAS(1)PK 173.77 9.82E-05 6314700 4313.7 4992 3793.8 3261.8 1919.3 1609.4 2057.2 1909.7 2461.1 2376.8 TRUE FALSE 3946.797163 4667.019893 3536.287426 3513.024401 1842.850217 1700.522837 1919.967942 1893.003694 2716.940152 2671.255928 1.477506188 1.747125704 1.32382951 1.315120863 0.689881564 0.636600492 0.718751027 0.708656806 1.017102152 1 11.38330249 -6.027562911 2.114236267 0.767147601 1.560492192 0.812884007 0.158500659 0.122799079 1.096530786 0.050443026 0.077498835 9.39E-07 6.027562911 0.79334459 SNTEPQSPPIAS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SNTEPQSPPIASPK 14 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 SNTEPQS(0.145)PPIAS(0.855)PK;SNTEPQS(0.001)PPIAS(0.999)PK 147.49 0.00047754 17195100 92448 81311 67155 56924 52387 36205 53395 37379 33075 46910 TRUE FALSE 99525.88996 77273.21398 69393.91418 52273.12711 50330.02316 37582.80665 46384.17236 42264.56364 35951.80371 45379.33054 2.193198727 1.702828426 1.529196516 1.151914902 1.109095761 0.828192179 1.022143161 0.93136155 0.792250641 1 15.46974771 -4.799071102 0.630014586 0.891353298 2.996257381 0.956716517 0.088260837 0.599198811 0.182735805 0.041315939 0.914551615 1.59E-05 4.799071102 2.104904083 up SNTPESIAET(ph)PPAR ddPTM_A459_MK2206_30min_R1 2 SNTPESIAETPPAR 14 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SNTPESIAET(1)PPAR;SNTPESIAET(1)PPAR 152.94 0.000872 9079300 1835.15 2310.6 1836.73 1565.72 2864.8 3151.2 3274.5 2633.46 2513.2 2414.2 TRUE FALSE 1679.060856 2160.17952 1712.057885 1686.312026 2750.68895 3329.618221 3056.06408 2610.435937 2774.456134 2713.289322 0.618828535 0.796147872 0.630989799 0.621500999 1.01378387 1.227151927 1.126331812 0.962092732 1.022543417 1 11.40582718 -6.321361727 5.207425863 1.072539654 0.673491115 0.838682235 0.084231036 0.085511802 4.861859898 0.028037413 0.032237844 4.77E-07 6.321361727 -0.399048538 SNVS(ph)SPATPTASSSSSTTPTRK ddPTM_A459_MK2206_30min_R1 1 SNVSSPATPTASSSSSTTPTRK 22 1 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.093)NVS(0.422)S(0.346)PAT(0.136)PT(0.003)ASSSSSTTPTRK 56.021 0.012439 2683500 1649.9 1017.4 1428.2 1688.5 1962.7 1490.3 1213.1 1713.6 686.96 530.44 TRUE FALSE 1509.567341 951.1670751 1331.257763 1818.548563 1884.521503 1574.679498 1132.176312 1698.618176 758.3719503 596.1549118 2.532172949 1.595503209 2.233073546 3.050463104 3.161127193 2.641393146 1.899131065 2.849289911 1.272105514 1 9.219543456 -8.357553314 5.028511003 1.035143005 2.480755349 0.579424952 0.464328164 0.175238504 6.724156797 0.483789446 0.126717919 4.39E-09 8.357553314 1.445612343 SNVSDAVAQS(ph)TR ddPTM_A459_MK2206_30min_R1 1 SNVSDAVAQSTR 12 0 P60174;P60174-3;P60174-4 P60174 TPI1 Triosephosphate isomerase 1 SNVSDAVAQS(0.925)T(0.075)R 113.52 0.0059221 5056300 2141.9 1939.3 1916.4 1548.1 2100 1734.4 2061.8 1913.9 1394.2 1527.6 TRUE FALSE 1959.720157 1813.051218 1786.320107 1667.33493 2016.352553 1832.600229 1924.261084 1897.166974 1539.132079 1716.850621 1.141462241 1.056033178 1.040463326 0.971158999 1.174448452 1.067419732 1.120808683 1.105027398 0.896485728 1 10.7455488 -8.253851996 24.99650253 0.948242861 1.082026616 0.463509734 0.058628694 466.7463222 1537699.175 0.041427758 0.014991771 5.57E-09 8.253851996 0.133783755 SNVSDAVAQS(ph)TR ddPTM_A459_MK2206_30min_R2 2 SNVSDAVAQSTR 12 0 P60174;P60174-3;P60174-4 P60174 TPI1 Triosephosphate isomerase 1 SNVSDAVAQS(0.916)T(0.084)R;SNVSDAVAQS(0.954)T(0.045)R 116.87 0.0049046 9939900 21967.4 26817 18010 29263 27883 24928 31170 24832 18441.5 25650 TRUE FALSE 23649.24103 25485.30678 18610.44441 26872.11929 26788.17332 25876.65251 27077.34156 28077.62766 20045.50834 24813.0426 0.953097184 1.027093178 0.750026698 1.082983644 1.079600505 1.042864953 1.091254386 1.131567302 0.807861763 1 14.59881103 SNVSS(ph)PATPTASSSSSTT(ph)PTRK ddPTM_A459_MK2206_30min_R2 1 SNVSSPATPTASSSSSTTPTRK 22 1 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 2 S(0.013)NVS(0.203)S(0.762)PAT(0.022)PTAS(0.012)S(0.002)S(0.025)S(0.064)S(0.166)T(0.137)T(0.353)PT(0.241)RK 107.17 0.00013814 0 14696 20250 14601 17013 19247 19155 24024 18895 21112 23199 TRUE FALSE 15821.13706 19244.41445 15087.79005 15622.98348 18491.26607 19883.95695 20869.61994 21364.64138 22948.2836 22442.01853 0.704978344 0.857517091 0.672300936 0.696148765 0.823957348 0.886014639 0.929935064 0.951992859 1.022558803 1 14.45391482 -6.947694288 1.207204255 0.989526177 0.736985336 0.818419936 0.051694913 0.201750533 0.607744682 0.029875982 0.022612864 1.13E-07 6.947694288 -0.252540841 SNVSS(ph)PATPTASSSSSTTPTRK ddPTM_A459_MK2206_30min_R2 1 SNVSSPATPTASSSSSTTPTRK 22 1 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.002)NVS(0.229)S(0.636)PAT(0.131)PT(0.002)ASSSSSTTPTRK 90.882 0.00019849 4731600 4605.9 8444 5990.1 8144.3 9478.3 7125.3 6977.5 3669 7628.4 4475.2 TRUE FALSE 4958.531245 8024.683239 6189.806944 7478.884638 9106.134317 7396.458284 6061.345869 4148.550898 8291.904443 4329.174591 1.14537567 1.853628924 1.42978917 1.727554406 2.103434298 1.708514667 1.400115829 0.958277568 1.915354595 1 12.07987627 -9.086585692 0.485110676 0.980074175 1.650247693 0.190076498 0.340944313 3.569265302 1.465022803 0.645003805 0.189043679 8.19E-10 9.086585692 0.670173518 SNVSSPAT(ph)PTASSSSS(ph)TTPTRK ddPTM_A459_MK2206_30min_R2 1 SNVSSPATPTASSSSSTTPTRK 22 1 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 2 S(0.001)NVS(0.022)S(0.069)PAT(0.908)PTAS(0.17)S(0.033)S(0.028)S(0.031)S(0.283)T(0.234)T(0.194)PT(0.025)RK 92.901 0.00043356 3936700 13220 17802 14512 18329 20965 16976 21518 20003 18771 19354 TRUE FALSE 14232.13336 16917.97857 14995.82284 16831.46207 20141.80876 17622.03358 18692.66075 22617.46078 20403.66765 18722.48057 0.760162806 0.903618434 0.800952779 0.898997438 1.075808768 0.941223227 0.998407272 1.208037616 1.089795104 1 14.19248397 -6.237605005 0.734654087 1.092436928 0.793040889 0.647259612 0.076693144 0.486906537 0.561943111 0.046422642 0.085343816 5.79E-07 6.237605005 -0.299396039 SNVSSPAT(ph)PTASSSSSTTPTR ddPTM_A459_MK2206_30min_R1 2 SNVSSPATPTASSSSSTTPTR 21 0 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSS(0.001)PAT(0.398)PT(0.398)AS(0.123)S(0.038)S(0.012)S(0.012)S(0.012)T(0.004)T(0.001)PTR;SNVSS(0.001)PAT(0.874)PT(0.11)AS(0.008)S(0.006)S(0.001)SSTTPTR 218.74 4.76E-20 16159400 2376.1 2359.53 1986.57 1864.57 2125.61 1984.07 2108.96 2255.43 1968.68 1854.96 TRUE FALSE 2174.000218 2205.924168 1851.727163 2008.179504 2040.942453 2096.406329 1968.275126 2235.711013 2173.331331 2084.766449 1.042802765 1.058115728 0.888218037 0.963263537 0.978978942 1.005583302 0.944122603 1.072403585 1.04248192 1 11.02567006 -7.76647653 24.99935295 1.043082063 0.982208242 0.213664734 0.048322071 195.2496456 968997.983 0.026515298 0.013364798 1.71E-08 7.76647653 -0.060873821 SNVSSPAT(ph)PTASSSSSTTPTR ddPTM_A459_MK2206_30min_R2 2 SNVSSPATPTASSSSSTTPTR 21 0 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSS(0.001)PAT(0.796)PT(0.178)AS(0.012)S(0.008)S(0.002)S(0.001)S(0.001)TTPTR;SNVS(0.003)S(0.001)PAT(0.826)PT(0.151)AS(0.014)S(0.004)SSSTTPTR 219.61 4.20E-20 20252000 24505 23961 20207.8 29278 23842 25264 26587 21596 19829.4 26037 TRUE FALSE 26381.12164 22771.13158 20881.51797 26885.89374 22905.84328 26225.43922 23096.09496 24418.67135 21554.12537 25187.41482 1.047392987 0.904067835 0.829045701 1.067433634 0.909416208 1.041212026 0.91696965 0.969479064 0.855749807 1 14.62041543 -4.746852844 24.42313101 0.944177443 1.047393348 0.154356565 0.072798549 1126.535685 1886084.29 0.017482122 0.367904163 1.79E-05 4.746852844 0.103215905 SNVSSPAT(ph)PTASSSSSTTPTRK ddPTM_A459_MK2206_30min_R2 1 SNVSSPATPTASSSSSTTPTRK 22 1 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.001)NVS(0.014)S(0.032)PAT(0.914)PT(0.032)AS(0.002)SSSS(0.001)T(0.001)T(0.001)PT(0.002)RK 57.248 0.027073 4749000 4133.9 8035.2 8334.4 10143 9687.2 9863.2 10423 7026.2 10919 9153 TRUE FALSE 4450.394562 7636.183652 8612.264736 9314.284454 9306.831854 10238.55099 9054.44758 7944.548465 11868.71488 8854.33836 0.502623051 0.862422842 0.97266045 1.051945846 1.051104157 1.156331571 1.022600133 0.897249251 1.340440629 1 13.11216879 -4.550576292 1.155603035 1.071695847 9.50E-18 0.715145772 0.109606177 1.303340256 1.036822621 0.032137885 1.919520909 2.81E-05 4.550576292 -1.071695847 SNVSSPATPTAS(ph)SSSSTTPTRK ddPTM_A459_MK2206_30min_R2 2 SNVSSPATPTASSSSSTTPTRK 22 1 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPT(0.003)AS(0.238)S(0.153)S(0.099)S(0.065)S(0.065)T(0.188)T(0.188)PT(0.001)RK;SNVSSPATPT(0.017)AS(0.268)S(0.036)S(0.14)S(0.075)S(0.079)T(0.223)T(0.151)PT(0.01)RK 108.3 2.85E-05 18862900 15628.2 19827.3 13170.9 20122.9 19874.9 17749 17820 16385 15897.3 19441.3 TRUE FALSE 16824.70701 18842.70511 13610.01123 18478.7947 19094.51156 18424.45063 15480.21259 18526.57576 17280.01842 18806.93197 0.894601365 1.001902125 0.723669935 0.982552323 1.015291148 0.979662747 0.823112064 0.985092932 0.91881113 1 14.1989769 SNVSSPATPTASS(ph)SSSTTPTR ddPTM_A459_MK2206_30min_R2 1 SNVSSPATPTASSSSSTTPTR 21 0 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPT(0.163)AS(0.163)S(0.249)S(0.06)S(0.121)S(0.121)T(0.121)T(0.001)PTR 159.72 1.15E-07 15929000 33265 37866 30188 37923 41659 42444 43885 32895 31789 38671 TRUE FALSE 35811.79398 35985.6295 31194.45285 34824.56959 40023.25834 44059.23616 38122.84678 37194.48945 34553.94976 37409.16844 0.957299921 0.96194679 0.83387186 0.930910016 1.069878322 1.177765719 1.019077632 0.994261327 0.923675965 1 15.19110428 -6.199136985 6.56652726 1.037140126 0.91674565 0.374168171 0.069249049 0.272522754 23.51071355 0.02246533 0.029020599 6.32E-07 6.199136985 -0.120394476 SNVSSPATPTASSSSS(ph)TTPTRK ddPTM_A459_MK2206_30min_R1 2 SNVSSPATPTASSSSSTTPTRK 22 1 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPT(0.001)AS(0.004)S(0.016)S(0.04)S(0.105)S(0.277)T(0.277)T(0.277)PT(0.001)RK;SNVSSPATPT(0.004)AS(0.003)S(0.014)S(0.068)S(0.068)S(0.345)T(0.249)T(0.249)PTRK 119.14 1.69E-05 15267100 3712.2 3617.6 3676.5 3099.4 3381.8 3456 3691.6 3672.7 2954.3 2514.16 TRUE FALSE 3396.457896 3382.093582 3426.949423 3338.116325 3247.095745 3651.675733 3445.3401 3640.589971 3261.410057 2825.633122 1.202016592 1.196933019 1.212807635 1.181369336 1.149156881 1.292338947 1.21931615 1.288415663 1.154222759 1 11.46435844 -8.540968342 21.84711562 0.999999998 1.21630073 0.715520027 0.041606865 347.1006688 419199.9779 0.041159536 0.010627346 2.88E-09 8.540968342 0.216300732 SNVSSPATPTASSSSST(ph)TPTR ddPTM_A459_MK2206_30min_R2 1 SNVSSPATPTASSSSSTTPTR 21 0 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPTAS(0.003)S(0.008)S(0.027)S(0.091)S(0.016)T(0.415)T(0.415)PT(0.023)R 236.6 1.67E-30 6001700 16058 16221 15027 18139 14895 15785 19702 16424 13217 18502 TRUE FALSE 17287.41283 15415.48873 15527.99268 16656.98568 14310.14746 16385.70924 17115.10373 18570.67319 14366.59077 17898.28126 0.965869995 0.861283187 0.867568928 0.930647219 0.799526349 0.915490655 0.956242864 1.037567403 0.802679909 1 14.12753343 -7.000716773 24.99988033 0.949912255 0.88246017 0.157519905 0.069811941 46.54176943 1623363.457 0.02376658 0.020707129 9.98E-08 7.000716773 -0.067452085 SNVSSPATPTASSSSST(ph)TPTRK ddPTM_A459_MK2206_30min_R1 1 SNVSSPATPTASSSSSTTPTRK 22 1 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPTASSS(0.001)S(0.01)S(0.24)T(0.558)T(0.184)PT(0.007)RK 159.86 4.79E-09 16625000 2098.5 2035.2 1929.8 1861.7 1830.1 1670.6 2040.6 2048.6 1723.6 1619.1 TRUE FALSE 1920.011555 1902.70811 1798.810553 2005.088457 1757.203242 1765.187928 1904.475297 2030.689306 1902.774388 1819.686332 1.055133251 1.045624225 0.988527815 1.101886859 0.965662714 0.970050661 1.046595374 1.115955685 1.045660648 1 10.82947407 -7.516749443 24.95010382 1.064740004 1.020791842 0.081751434 0.04712279 542.1368471 2206865.699 0.021407252 0.012936383 3.04E-08 7.516749443 -0.043948163 SNVSSPATPTASSSSSTT(ph)PTR ddPTM_A459_MK2206_30min_R1 4 SNVSSPATPTASSSSSTTPTR 21 0 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPTASSSSST(0.002)T(0.998)PTR;SNVSSPATPTASSSS(0.001)S(0.003)T(0.09)T(0.869)PT(0.037)R;SNVSSPATPT(0.001)ASS(0.001)S(0.003)S(0.003)S(0.003)T(0.009)T(0.979)PT(0.001)R;SNVSSPATPTASSSSS(0.002)T(0.064)T(0.9)PT(0.034)R 334.14 7.83E-156 32429600 11225.4 10250.5 9860.8 8885 10336.7 10389.6 11620 10287 9595.4 9313 TRUE FALSE 10270.62078 9583.190587 9191.47637 9569.324239 9924.967351 10977.85017 10844.851 10197.06184 10592.87617 10466.76475 0.981260306 0.915582877 0.878158303 0.91425808 0.948236402 1.04882936 1.036122552 0.974232448 1.012048749 1 13.35352796 -6.592544018 5.152097516 1.013639023 0.919949344 0.679362155 0.030159537 0.124608234 6.218526262 0.010709246 0.01075324 2.56E-07 6.592544018 -0.093689679 SNVSSPATPTASSSSSTT(ph)PTR ddPTM_A459_MK2206_30min_R2 2 SNVSSPATPTASSSSSTTPTR 21 0 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPTAS(0.007)S(0.007)S(0.022)S(0.022)S(0.022)T(0.209)T(0.689)PT(0.021)R;SNVSSPATPTASSSSST(0.009)T(0.991)PTR 301.93 2.94E-101 22056300 41545 47583 43348 43663 41074 49141 53810 37421 40528 48142 TRUE FALSE 44725.71714 45220.09741 44793.20068 40095.59323 39461.22838 51011.09519 46744.68236 42312.05319 44053.05218 46571.13048 0.960374307 0.970989902 0.961823349 0.860953832 0.847332413 1.095337276 1.003726598 0.908546835 0.945930488 1 15.50714828 -6.740178374 24.9997754 0.98580616 0.922121626 0.260262756 0.05902653 423.019935 497407.3038 0.02151873 0.021498598 1.82E-07 6.740178374 -0.063684534 SNVSSPATPTASSSSSTT(ph)PTRK ddPTM_A459_MK2206_30min_R1 1 SNVSSPATPTASSSSSTTPTRK 22 1 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPT(0.001)AS(0.003)S(0.008)S(0.036)S(0.027)S(0.068)T(0.173)T(0.678)PT(0.006)RK 94.037 0.00030917 20533000 1547.7 1191.2 1309.9 1293.1 1193.6 1037.6 1364.3 1417.4 1308.6 892.79 TRUE FALSE 1416.059988 1113.652663 1220.987638 1392.694786 1146.056385 1096.348015 1273.290036 1405.007821 1444.633653 1003.395565 1.411267935 1.10988398 1.216855724 1.387981803 1.142178044 1.092637892 1.268981128 1.40025317 1.439744905 1 9.970674752 -7.52352835 24.99432301 1.318922865 1.220872279 0.006451733 0.149020754 62.70643433 2412346.572 0.06737288 0.039355986 3.00E-08 7.52352835 -0.098050586 SNVSSPATPTASSSSSTT(ph)PTRK ddPTM_A459_MK2206_30min_R2 2 SNVSSPATPTASSSSSTTPTRK 22 1 A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPTASSS(0.001)S(0.001)S(0.014)T(0.241)T(0.74)PT(0.002)RK;SNVSSPATPTAS(0.004)S(0.005)S(0.005)S(0.174)S(0.174)T(0.174)T(0.461)PT(0.003)RK 183.65 1.27E-16 63463000 79713 99561 76841 90811 108037 84980 98602 76025 84036 94323 TRUE FALSE 85815.88857 94616.94552 79402.84059 83391.45081 103794.9245 88213.97345 85655.43896 85961.72853 91345.29938 91245.24823 0.940497069 1.036952031 0.870213432 0.913926505 1.137537861 0.96677882 0.938738626 0.942095399 1.001096508 1 16.47746181 SNVVS(ph)PTKNEDNGAPENSVEKPHEKPEAR ddPTM_A459_MK2206_30min_R2 3 SNVVSPTKNEDNGAPENSVEKPHEKPEAR 29 3 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 S(0.055)NVVS(0.715)PT(0.229)KNEDNGAPENS(0.001)VEKPHEKPEAR;S(0.014)NVVS(0.715)PT(0.271)KNEDNGAPENSVEKPHEKPEAR;S(0.092)NVVS(0.481)PT(0.426)KNEDNGAPENS(0.001)VEKPHEKPEAR 53.361 0.006421 143595600 73158 78693 70881 66506 75180 38089 91183 67956 54575 81546 TRUE FALSE 78759.03273 74785.22005 73244.13716 61072.24706 72228.05545 39538.50359 79210.56257 76838.08253 59321.83485 78885.1607 0.998401119 0.948026465 0.928490688 0.774191832 0.915610171 0.501215986 1.004125007 0.974049895 0.752002459 1 16.26746632 -5.581397261 5.867702234 0.840043717 0.965335694 0.118333922 0.143011385 0.407792623 28.35781603 0.039061424 0.069117088 2.62E-06 5.581397261 0.125291977 SNVVSPT(ph)KNEDNGAPENSVEKPHEKPEAR ddPTM_A459_MK2206_30min_R1 3 SNVVSPTKNEDNGAPENSVEKPHEKPEAR 29 3 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 S(0.008)NVVS(0.204)PT(0.787)KNEDNGAPENS(0.001)VEKPHEKPEAR;S(0.001)NVVS(0.049)PT(0.944)KNEDNGAPENS(0.005)VEKPHEKPEAR;S(0.004)NVVS(0.023)PT(0.972)KNEDNGAPENS(0.001)VEKPHEKPEAR 64.779 0.00034607 96437000 9181.28 12095.34 11585.5 10587.92 7936.03 6566.04 7857.57 9196.5 10369 9602.73 TRUE FALSE 8400.363923 11307.93117 10799.10854 11403.40343 7619.92112 6937.803511 7333.405842 9116.09597 11446.89466 10792.38869 0.778360024 1.04776908 1.000622647 1.056615339 0.706045838 0.642842258 0.679497936 0.844678248 1.060645144 1 13.39772659 -6.258691615 24.99899483 0.798407335 0.978463786 0.190267288 0.14486659 361.2070932 3286238.893 0.04544973 0.056034407 5.51E-07 6.258691615 0.180056451 SPAAPGQS(ph)PTGSVCYER ddPTM_A459_MK2206_30min_R1 1 SPAAPGQSPTGSVCYER 17 0 O75534;O75534-4 O75534 CSDE1 Cold shock domain-containing protein E1 1 SPAAPGQS(0.994)PT(0.005)GS(0.001)VCYER 96.805 0.010503 0 518.76 403.9 486.5 246.12 495.83 419.91 366.76 548.76 413.99 456.93 TRUE FALSE 474.6367379 377.6060366 453.4777355 265.076205 476.0800412 443.6849413 342.2941096 543.9622492 457.025742 513.537938 0.924248634 0.735303098 0.883046221 0.51617648 0.927059144 0.86397695 0.666541037 1.059244525 0.889955168 1 9.004327051 -7.769226491 24.99967952 0.980949893 0.78748525 0.334450633 0.126055537 208.4788764 669286.3202 0.065013545 0.032144791 1.70E-08 7.769226491 -0.193464643 SPAAPYFLGSSFS(ph)PVR ddPTM_A459_MK2206_30min_R1 2 SPAAPYFLGSSFSPVR 16 0 P30291 P30291 WEE1 Wee1-like protein kinase 1 SPAAPYFLGSSFS(1)PVR;SPAAPYFLGSS(0.001)FS(0.999)PVR 222.51 5.15E-11 36088000 2295.6 2497.5 2953.2 1740.16 2549.72 2516.1 2742.9 2332.86 2614.7 2614.7 TRUE FALSE 2100.347165 2334.912296 2752.745012 1874.187425 2448.159253 2658.559408 2559.926146 2312.464051 2886.507422 2938.628776 0.714737153 0.79455844 0.936744728 0.637776176 0.833095787 0.904693859 0.871129476 0.78691942 0.982263376 1 11.52092741 -8.183943647 0.284346115 1.032163242 0.749224121 0.409007165 0.084732891 1.952063032 0.582686268 0.209241665 0.164493555 6.55E-09 8.183943647 -0.282939121 SPAAPYFLGSSFS(ph)PVR ddPTM_A459_MK2206_30min_R2 2 SPAAPYFLGSSFSPVR 16 0 P30291 P30291 WEE1 Wee1-like protein kinase 1 SPAAPYFLGSS(0.001)FS(0.999)PVR;SPAAPYFLGSSFS(1)PVR 182.91 8.96E-07 27540000 31269 32989 27384 28664 25954 23226 31830 25635 27133 31062 TRUE FALSE 33662.97868 31350.81423 28296.96889 26322.05951 24934.91555 24109.88171 27650.68277 28985.58252 29492.97929 30048.44948 1.12029004 1.043342161 0.941711449 0.875987279 0.829823701 0.802366915 0.920203313 0.964628226 0.981514181 1 14.87500293 -5.154073212 2.097320702 0.901852113 1.120233098 0.566081039 0.060391258 0.290488316 2.221671193 0.018412337 0.088675253 7.01E-06 5.154073212 0.218380985 SPAFVGPGRPGEQPSPCQEGS(ph)QGGSR ddPTM_A459_MK2206_30min_R2 1 SPAFVGPGRPGEQPSPCQEGSQGGSR 26 1 I3L2J0 I3L2J0 CIC 1 SPAFVGPGRPGEQPS(0.276)PCQEGS(0.651)QGGS(0.073)R 54.824 0.0063184 6462400 5807.6 5323.3 9425 6566 5755 6603.6 11547 6716.8 7465.3 7342.1 TRUE FALSE 6252.234321 5058.952663 9739.224796 6029.536796 5529.029783 6854.904625 10030.86503 7594.708822 8114.6183 7102.527878 0.880282968 0.712274946 1.371233589 0.848928283 0.778459427 0.965135898 1.412295059 1.069296587 1.142497212 1 12.79411687 -7.027240382 24.67340315 1.165642482 0.922478473 0.256654789 0.192767065 876.256515 793680.4876 0.073963212 0.057464845 9.39E-08 7.027240382 -0.243164009 SPAGLSGTPATQGLLGACS(ph)PVR ddPTM_A459_MK2206_30min_R1 2 SPAGLSGTPATQGLLGACSPVR 22 0 P57059;A0A0B4J2F2 P57059 SIK1;LOC102724428 Serine/threonine-protein kinase SIK1 1 SPAGLSGTPATQGLLGACS(1)PVR;SPAGLSGTPATQGLLGACS(1)PVR 207.17 2.60E-23 9594600 853.28 920.1 1206.97 1141.17 907.55 947.55 1084.9 868.55 759.17 904.54 TRUE FALSE 780.7040552 860.2013228 1125.044239 1229.063111 871.4003617 1001.199462 1012.528301 860.9563589 838.0884382 1016.601244 0.767955046 0.846154112 1.106672105 1.208992334 0.857170269 0.984849731 0.995993568 0.846896818 0.824402334 1 9.989538186 -7.758837298 24.92337944 0.876737174 0.973353853 0.064731607 0.12830984 167.5310131 1604706.084 0.067975133 0.036923997 1.74E-08 7.758837298 0.096616678 SPAGLSGTPATQGLLGACS(ph)PVR ddPTM_A459_MK2206_30min_R2 2 SPAGLSGTPATQGLLGACSPVR 22 0 P57059;A0A0B4J2F2 P57059 SIK1;LOC102724428 Serine/threonine-protein kinase SIK1 1 SPAGLSGT(0.001)PAT(0.005)QGLLGACS(0.994)PVR;SPAGLSGT(0.003)PAT(0.006)QGLLGACS(0.991)PVR 89.484 0.00044821 12650900 24505.3 33462 26095.9 33099 39179 36899 40755 26131 32716 37688 TRUE FALSE 26381.44461 31800.32574 26965.92428 30394.70582 37640.6356 38303.2173 35403.81954 29546.41142 35561.57854 36458.24365 0.723607118 0.872239652 0.7396386 0.833685411 1.032431402 1.050605116 0.971078582 0.81041785 0.975405697 1 15.15395744 -6.101416979 5.121677768 0.966881619 0.787555272 0.612635539 0.071228089 0.172721054 6.936770797 0.022620777 0.029740591 7.92E-07 6.101416979 -0.179326347 SPAGPAATPAQAQAAST(ph)PR ddPTM_A459_MK2206_30min_R1 6 SPAGPAATPAQAQAASTPR 19 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SPAGPAATPAQAQAAS(0.238)T(0.762)PR;SPAGPAATPAQAQAAS(0.039)T(0.961)PR;SPAGPAATPAQAQAAS(0.238)T(0.762)PR;SPAGPAATPAQAQAAS(0.243)T(0.757)PR;SPAGPAATPAQAQAAS(0.084)T(0.916)PR;SPAGPAATPAQAQAAS(0.197)T(0.803)PR 214.42 9.52E-17 247334500 15073.14 15466.21 14246.95 11702.51 14257.71 15566.04 16519.53 13229.46 13611.77 14096.95 TRUE FALSE 13791.09029 14459.35692 13279.90673 12603.83935 13689.79522 16447.37573 15417.5423 13113.79623 15026.7622 15843.38659 0.870463534 0.912643066 0.838198743 0.795526845 0.864070011 1.038122477 0.973121637 0.827714211 0.94845645 1 13.95159313 -6.559800247 24.72926512 0.948070803 0.853808419 0.431650815 0.057704991 170.4818297 114184.0662 0.020336929 0.020336981 2.76E-07 6.559800247 -0.094262384 SPAGPAATPAQAQAAST(ph)PR ddPTM_A459_MK2206_30min_R2 7 SPAGPAATPAQAQAASTPR 19 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SPAGPAATPAQAQAAS(0.358)T(0.642)PR;SPAGPAATPAQAQAAS(0.229)T(0.771)PR;SPAGPAATPAQAQAAS(0.252)T(0.748)PR;SPAGPAATPAQAQAAS(0.087)T(0.913)PR;SPAGPAATPAQAQAAS(0.095)T(0.905)PR;SPAGPAATPAQAQAAS(0.068)T(0.932)PR;SPAGPAATPAQAQAAS(0.239)T(0.761)PR 208.69 4.55E-16 466401000 158387.2 164838.5 149092.9 168822.8 146254.1 152334.6 169690.6 135674.7 145109.8 155569.5 TRUE FALSE 170513.4458 156652.8598 154063.5829 155029.4372 140511.4292 158131.7999 147410.0204 153407.8491 157731.1881 150493.28 1.133030298 1.040929268 1.023724002 1.030141926 0.933672448 1.050756552 0.979512311 1.019366773 1.04809456 1 17.19933954 -4.204748683 1.210369402 1.007846273 1.43848763 0.564712082 0.03246089 3.727432741 1.758550096 0.009408471 2.834740427 6.24E-05 4.204748683 0.430641357 SPAGSQQQFGYSPGQQQT(ph)HPQGSPR ddPTM_A459_MK2206_30min_R1 1 SPAGSQQQFGYSPGQQQTHPQGSPR 25 0 Q8TAP9 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein 1 SPAGSQQQFGYSPGQQQT(0.526)HPQGS(0.474)PR 98.364 7.25E-06 5016400 587.8 601.37 627.29 633.59 503.33 532.3 507.6 686.64 700.32 446.75 TRUE FALSE 537.8045233 562.2207037 584.7113025 682.3892116 483.2813003 562.438366 473.7389302 680.6367789 773.1207701 502.0967628 1.071117289 1.119745725 1.164539081 1.35907909 0.962526222 1.120179232 0.94352118 1.355588861 1.539784415 1 8.971821613 -7.789945596 24.9675218 1.335765234 1.113392002 0.212885148 0.164688645 286.8069312 251199.3682 0.087406307 0.042000761 1.62E-08 7.789945596 -0.222373231 SPAGSQQQFGYSPGQQQT(ph)HPQGSPR ddPTM_A459_MK2206_30min_R2 1 SPAGSQQQFGYSPGQQQTHPQGSPR 25 0 Q8TAP9 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein 1 SPAGSQQQFGY(0.001)S(0.001)PGQQQT(0.512)HPQGS(0.486)PR 63.427 0.0043791 13961000 1201.6 3397.2 1300.1 3126 2248.8 3066.6 2686.6 4075.9 3190.8 3087.1 TRUE FALSE 1293.59542 3228.499988 1343.444685 2870.5958 2160.500813 3183.301612 2333.846193 4608.634125 3468.330016 2986.36818 0.433166757 1.081079021 0.449859027 0.961233052 0.72345427 1.065944123 0.781499819 1.543223691 1.16138728 1 11.54417633 -7.192954936 1.172853031 1.230389786 0.735409583 0.364771445 0.254279827 0.490198807 1.330425476 0.154662228 0.093576252 6.41E-08 7.192954936 -0.494980203 SPAGSQQQFGYSPGQQQTHPQGS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SPAGSQQQFGYSPGQQQTHPQGSPR 25 0 Q8TAP9 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein 1 SPAGSQQQFGYSPGQQQT(0.392)HPQGS(0.608)PR 109.08 1.50E-07 13151000 5255.3 5323.1 4802.2 5510 5500.7 5785.8 5678.8 6707.1 4594.3 3852.6 TRUE FALSE 5657.649809 5058.762595 4962.302951 5059.815374 5284.714879 6005.982673 4933.166739 7583.740999 4993.903909 3726.889978 1.518061934 1.357368376 1.331486301 1.357650858 1.417995946 1.611526691 1.323668466 2.034871178 1.339965478 1 11.86375651 -6.57384997 9.412946862 1.517927584 1.384868933 0 0.252138298 1.116271688 195.3224939 0.079097093 0.079131689 2.67E-07 6.57384997 -0.13305865 SPAPGAPTRS(ph)PSTPAK ddPTM_A459_MK2206_30min_R1 2 SPAPGAPTRSPSTPAK 16 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 SPAPGAPT(0.327)RS(0.672)PS(0.001)TPAK;SPAPGAPT(0.248)RS(0.375)PS(0.375)T(0.003)PAK 147.53 0.0014932 15856700 2815.9 2763 2403.4 2467.9 2607.1 2410.39 2521.5 2595.32 1921.26 1733.83 TRUE FALSE 2576.392918 2583.128198 2240.263904 2657.978086 2503.253686 2546.864199 2353.295336 2572.629391 2120.981852 1948.62995 1.322156071 1.325612489 1.149661024 1.364024034 1.284622402 1.307002491 1.207666615 1.3202247 1.088447733 1 10.92824443 -8.411199109 3.552183382 1.002287726 1.282708091 0.726288229 0.060121564 0.110996952 2.457499982 0.055713982 0.014779196 3.88E-09 8.411199109 0.280420365 SPAPGAPTRS(ph)PSTPAK ddPTM_A459_MK2206_30min_R2 1 SPAPGAPTRSPSTPAK 16 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 SPAPGAPT(0.004)RS(0.987)PS(0.004)T(0.004)PAK 75.743 0.016712 39818000 43110 45590 43951 44987 54748 48240 53417 36566 45265 47369 TRUE FALSE 46410.53475 43326.06689 45416.3044 41311.41819 52598.31843 50075.807 46403.28373 41345.30175 49202.06788 45823.35341 1.012814019 0.945501882 0.991116997 0.901536337 1.147849612 1.092801013 1.012655781 0.902275776 1.073733462 1 15.48379542 -4.406785339 20.81722997 1.006146014 2.754094806 0.000155924 0.076074309 12194.16036 1999323.411 0.019116772 87169.24509 3.92E-05 4.406785339 1.747948791 SPAPPPPAVFPAARPEPGDGLS(ph)SPAGGSYETGDR ddPTM_A459_MK2206_30min_R2 1 SPAPPPPAVFPAARPEPGDGLSSPAGGSYETGDR 34 1 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 SPAPPPPAVFPAARPEPGDGLS(0.752)S(0.234)PAGGS(0.006)Y(0.006)ET(0.003)GDR 46.247 0.0096764 4004200 4141.8 4587.6 4334.4 6085.9 5382.6 3717.2 3967.9 3503.3 4247.6 3586.6 TRUE FALSE 4458.899393 4359.786455 4478.906733 5588.662502 5171.252079 3858.660651 3446.909964 3961.193339 4617.04857 3469.569536 1.285144842 1.256578492 1.290911361 1.610765383 1.49045927 1.112143916 0.993469054 1.141695907 1.330726628 1 11.76054097 -6.774838937 24.97793128 1.116829388 1.386657397 0.515663588 0.131396758 212.6377254 396372.707 0.050425225 0.044720158 1.68E-07 6.774838937 0.269828009 SPAPPPPAVFPAARPEPGDGLSS(ph)PAGGSYETGDR ddPTM_A459_MK2206_30min_R1 1 SPAPPPPAVFPAARPEPGDGLSSPAGGSYETGDR 34 1 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 SPAPPPPAVFPAARPEPGDGLS(0.284)S(0.573)PAGGS(0.067)Y(0.014)ET(0.061)GDR 43.829 0.012549 4365900 321.55 433.13 460.11 409.27 294.21 438 423.88 358.88 265.57 358.18 TRUE FALSE 294.200484 404.9331583 428.8790151 440.7920463 282.4909927 462.7991815 395.6037386 355.74235 293.1769519 402.5540425 0.730834752 1.005910053 1.065394878 1.094988498 0.701746754 1.14965727 0.982734482 0.883713272 0.728292157 1 8.653038667 -7.877450105 4.881797906 0.847036541 0.969355223 0.067803394 0.150089393 0.486747398 18.45298429 0.08438706 0.039114605 1.33E-08 7.877450105 0.122318682 SPAS(ph)PLNNQGIPTPAQLTK ddPTM_A459_MK2206_30min_R1 2 SPASPLNNQGIPTPAQLTK 19 0 A0A2U3U043;J3QLL6;J3KSG1;J3QRK1;Q719H9 A0A2U3U043 KCTD1 BTB/POZ domain-containing protein KCTD1 1 S(0.001)PAS(0.999)PLNNQGIPTPAQLTK;S(0.062)PAS(0.938)PLNNQGIPTPAQLTK 249.49 1.22E-37 20324700 7761 7529.9 8169.5 6525.2 7849.1 6989.7 8307.2 6724 6356.7 6305.9 TRUE FALSE 7100.886195 7039.702141 7614.977102 7027.772035 7536.453726 7385.450774 7753.041845 6665.212777 7017.501713 7087.122499 1.001942071 0.993308941 1.074480807 0.991625591 1.063401081 1.042094415 1.093961879 0.940468121 0.990176438 1 12.79098427 -7.7755161 24.99987949 0.973991718 1.036436745 0.376364984 0.035546768 253.0814544 449459.3138 0.019143777 0.009270348 1.68E-08 7.7755161 0.062445027 SPAS(ph)PLNNQGIPTPAQLTK ddPTM_A459_MK2206_30min_R2 2 SPASPLNNQGIPTPAQLTK 19 0 A0A2U3U043;J3QLL6;J3KSG1;J3QRK1;Q719H9 A0A2U3U043 KCTD1 BTB/POZ domain-containing protein KCTD1 1 S(0.01)PAS(0.99)PLNNQGIPTPAQLTK;S(0.002)PAS(0.998)PLNNQGIPTPAQLTK 195.96 3.32E-15 19771400 103476 119618 116235 132041 139955 128160 139345 111074 117110 136703 TRUE FALSE 111398.2021 113677.9441 120110.2169 121252.8279 134459.6635 133037.2186 121048.8341 125591.7532 127296.0161 132242.3923 0.842378909 0.859618025 0.908258046 0.916898324 1.01676672 1.006010374 0.915355749 0.94970872 0.962596138 1 17.0128252 -5.61831376 1.586323466 0.969913168 0.847227147 0.714631927 0.030475005 0.241935197 1.196664736 0.010339013 0.027621075 2.41E-06 5.61831376 -0.122686021 SPASPSCPS(ph)PVPQR ddPTM_A459_MK2206_30min_R2 1 SPASPSCPSPVPQR 14 0 A7MCY6 A7MCY6 TBKBP1 TANK-binding kinase 1-binding protein 1 1 SPAS(0.002)PS(0.003)CPS(0.995)PVPQR 98.582 0.015846 0 5008.3 6740.2 4681.8 7024 4651 4502.4 4951.4 4356.3 3940.9 6051.2 TRUE FALSE 5391.739299 6405.491469 4837.888875 6450.116731 4468.378371 4673.741987 4301.275232 4925.683367 4283.672358 5853.74984 0.92107443 1.094254392 0.826459792 1.101877755 0.763336065 0.798418469 0.734789725 0.841457784 0.731782614 1 12.51514538 -6.278620609 24.97969403 0.799200989 0.98226524 0.402071212 0.103419159 731.0244903 1062829.932 0.029532186 0.033565971 5.26E-07 6.278620609 0.183064251 SPATSCELT(ph)PSNLNNK ddPTM_A459_MK2206_30min_R2 1 SPATSCELTPSNLNNK 16 0 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 SPATSCELT(0.998)PS(0.002)NLNNK 180.56 3.17E-09 0 7330.1 5831.8 4834.6 5267.4 5746.4 5701.6 6612.5 4720 3333.2 6235.3 TRUE FALSE 7891.298092 5542.201292 4995.783151 4837.03657 5520.767463 5918.578383 5744.270807 5336.920206 3623.115711 6031.842672 1.308273196 0.918823914 0.828234989 0.801916899 0.915270468 0.981222274 0.952324376 0.884791016 0.600664823 1 12.55838308 -4.76347864 4.184774626 0.872354043 1.351036685 0.592087489 0.108301937 0.162952159 5.671438402 0.027501968 0.240395658 1.72E-05 4.76347864 0.478682642 SPAVATSTAAPPPPS(ph)SPLPSK ddPTM_A459_MK2206_30min_R2 4 SPAVATSTAAPPPPSSPLPSK 21 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 SPAVATSTAAPPPPS(0.483)S(0.483)PLPS(0.034)K;SPAVATSTAAPPPPS(0.61)S(0.388)PLPS(0.002)K;SPAVATSTAAPPPPS(0.613)S(0.381)PLPS(0.006)K;SPAVATSTAAPPPPS(0.62)S(0.377)PLPS(0.003)K 128.29 3.95E-05 223727000 319704 336498 315710 307969 320669 284714 354175 287020 269693 359039 TRUE FALSE 344180.7841 319787.9986 326235.6138 282806.9476 308077.9238 295548.9908 307671.3971 324534.4995 293150.4096 347323.5868 0.99095137 0.92072065 0.939284362 0.814246306 0.887005477 0.850932681 0.885835022 0.934386583 0.844026783 1 18.40592086 -4.838045433 1.453999702 0.885686594 1.020569505 0.245678465 0.0508189 1.36034585 2.879222301 0.013946765 0.260638883 1.45E-05 4.838045433 0.134882911 SPAVATSTAAPPPPSS(ph)PLPSK ddPTM_A459_MK2206_30min_R1 5 SPAVATSTAAPPPPSSPLPSK 21 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 SPAVATSTAAPPPPS(0.227)S(0.773)PLPSK;SPAVATSTAAPPPPS(0.207)S(0.793)PLPSK;SPAVATSTAAPPPPS(0.15)S(0.482)PLPS(0.368)K;SPAVATSTAAPPPPS(0.227)S(0.773)PLPSK;SPAVATSTAAPPPPS(0.321)S(0.665)PLPS(0.014)K 290.67 1.01E-86 635613000 32116.1 32799.7 31671 26620.7 29530.4 26958.2 28439.2 26397.2 24816 21785.7 TRUE FALSE 29384.45705 30664.43357 29521.26076 28671.03093 28354.14164 28484.54999 26542.07286 26166.41206 27395.712 24484.67699 1.200116181 1.252392816 1.205703501 1.170978524 1.158036173 1.163362294 1.084027895 1.068685206 1.118892114 1 14.57959154 -7.029639471 0.277478364 0.991170454 1.282241058 0.867682325 0.025877472 0.81129241 0.155803996 0.043686843 0.083279749 9.34E-08 7.029639471 0.291070604 SPAVATSTAAPPPPSS(ph)PLPSK ddPTM_A459_MK2206_30min_R2 5 SPAVATSTAAPPPPSSPLPSK 21 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 SPAVATSTAAPPPPS(0.08)S(0.881)PLPS(0.039)K;SPAVATSTAAPPPPS(0.232)S(0.767)PLPSK;SPAVATSTAAPPPPS(0.231)S(0.768)PLPS(0.001)K;SPAVATSTAAPPPPS(0.227)S(0.773)PLPSK;SPAVATSTAAPPPPS(0.23)S(0.77)PLPSK 262.37 9.49E-49 1183275900 611986 769985 632305 740786 692467 618539 680891 537031 613582 639200 TRUE FALSE 658840.1187 731748.6646 653385.7331 680261.4141 665277.2662 642077.9351 591489.1938 607222.7956 666950.2533 618342.9563 1.065493044 1.183402604 1.056672072 1.100136109 1.075903363 1.038384813 0.95657141 0.982016192 1.07860896 1 19.23804771 -6.760652385 2.260635322 1.002475731 1.103327126 0.506510712 0.043265047 0.241979022 2.539840008 0.016717367 0.015430557 1.74E-07 6.760652385 0.100851395 SPCETISS(ph)PSSTLESK ddPTM_A459_MK2206_30min_R2 1 SPCETISSPSSTLESK 16 0 Q9C0D5 Q9C0D5 TANC1 Protein TANC1 1 SPCETIS(0.147)S(0.584)PS(0.205)S(0.051)T(0.013)LESK 115.1 0.0020268 6849600 61031 72860 59958 63436 51422 51522 53051 59297 45765 53637 TRUE FALSE 65703.58028 69241.87835 61956.96979 58253.07588 49402.91391 53482.70581 46085.33997 67047.3215 49745.55698 51886.82908 1.26628629 1.334478895 1.194078939 1.122694852 0.952128214 1.030756875 0.888189562 1.292183829 0.958731876 1 15.66308075 -5.720958465 2.057581648 1.029697271 1.29796232 0.535579446 0.103409853 0.250797408 2.160454744 0.030918077 0.062851432 1.90E-06 5.720958465 0.268265049 SPDASSAFSPAS(ph)PATPNGTK ddPTM_A459_MK2206_30min_R1 1 SPDASSAFSPASPATPNGTK 20 0 Q53GS7-2;Q53GS7 Q53GS7-2 GLE1 Nucleoporin GLE1 1 SPDAS(0.001)S(0.012)AFS(0.354)PAS(0.473)PAT(0.158)PNGT(0.001)K 95.9 0.0010277 8376600 855.51 1127.8 1030.6 780.89 954.99 761.28 787.85 634.69 692.23 717.45 TRUE FALSE 782.744382 1054.380015 960.6457434 841.0342831 916.9507261 804.3830157 735.293964 629.1409722 764.1897857 806.3331225 0.970745664 1.307623345 1.191375768 1.043035762 1.137185985 0.997581512 0.911898499 0.780249446 0.947734583 1 9.655232176 -6.943361795 1.942464426 0.889379652 1.144154897 0.521250218 0.098658979 0.245922523 1.883568616 0.042766118 0.034435452 1.14E-07 6.943361795 0.254775245 SPDASSAFSPAS(ph)PATPNGTK ddPTM_A459_MK2206_30min_R2 2 SPDASSAFSPASPATPNGTK 20 0 Q53GS7-2;Q53GS7 Q53GS7-2 GLE1 Nucleoporin GLE1 1 SPDASSAFS(0.041)PAS(0.959)PATPNGTK;SPDASSAFS(0.291)PAS(0.709)PATPNGTK 257.88 1.87E-47 12051600 49313 56804 54920 58483 63875 50149 57609 50215 52491 59054 TRUE FALSE 53088.4412 53983.19596 56751.00539 53704.75182 61366.94655 52057.45534 50044.8691 56778.27291 57056.5723 57127.07282 0.929304419 0.944966953 0.993417002 0.940092835 1.074218291 0.911257181 0.87602719 0.993894315 0.9987659 1 15.80188699 -5.044076027 6.787402286 0.969972107 0.932880565 0.073132468 0.05186498 0.588953716 74.62495386 0.01367176 0.038642343 9.03E-06 5.044076027 -0.037091542 SPDEATAADQES(ph)EDDLSASR ddPTM_A459_MK2206_30min_R2 1 SPDEATAADQESEDDLSASR 20 0 C9JME2;Q9Y4F1;Q9Y4F1-2;M0QXT1 C9JME2 FARP1 "FERM, RhoGEF and pleckstrin domain-containing protein 1" 1 SPDEATAADQES(1)EDDLSASR 176.48 4.43E-13 5553600 26539 16253 22367 21435 17542 24841 30013 20147 25861 24724 TRUE FALSE 28570.84625 15445.89965 23112.70462 19683.69193 16853.21294 25786.34166 26072.25705 22780.28207 28110.34303 23917.2579 1.194570312 0.645805624 0.966360973 0.822991164 0.704646536 1.078147912 1.090102266 0.952462116 1.175316299 1 14.54576437 -6.789359399 24.8667686 1.058165748 0.857682269 0.290772821 0.149839844 248.3682437 221205.5891 0.04982455 0.043950441 1.62E-07 6.789359399 -0.200483479 SPDEEDYDYES(ph)YEK ddPTM_A459_MK2206_30min_R1 2 SPDEEDYDYESYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SPDEEDYDYES(1)YEK;SPDEEDYDYES(1)YEK 207.31 6.88E-06 11099200 2309.98 2075.17 1882.12 1740.98 1630.26 1597.43 1837.14 1639.11 1804.91 1608.73 TRUE FALSE 2113.504071 1940.076056 1754.366938 1875.070581 1565.323292 1687.875106 1714.587743 1624.779434 1992.536853 1808.031618 1.168953048 1.073032151 0.970318727 1.037078424 0.865761017 0.933542915 0.948317345 0.898645476 1.102047571 1 10.82020419 -4.806529748 1.19715094 0.956655068 1.265959333 0.497456657 0.064165809 1.162106958 1.454556024 0.019275321 0.446287517 1.56E-05 4.806529748 0.309304265 SPDEEDYDYESYEK ddPTM_A459_MK2206_30min_R1 3 SPDEEDYDYESYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 ;; 246.26 1.33E-20 13621300 2154.07 2539.26 2050.83 1545.9 2153.19 1535.48 2381 2318.96 1923.59 1909.73 FALSE TRUE 1970.855035 2373.953712 1911.625374 1664.965486 2067.423883 1622.417551 2222.167834 2298.685577 2123.554064 2146.32177 0.918247703 1.106056764 0.890651812 0.775729673 0.96324042 0.755906022 1.035337695 1.070988334 0.989392221 1 11.06765066 SPDEEDYDYESYEK ddPTM_A459_MK2206_30min_R2 3 SPDEEDYDYESYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 ;; 198.57 1.40E-20 17182500 51470 59227 53705 56206 57915 50235 70377 44400 44229 57781 FALSE TRUE 55410.58277 56285.8733 55495.4979 51613.79001 55640.9661 52146.72813 61136.41536 50203.23245 48075.95847 55895.6107 0.991322612 1.00698199 0.992841785 0.923396119 0.995444283 0.932930645 1.093760576 0.89816055 0.860102571 1 15.77044738 SPDKPGGS(ph)PSASR ddPTM_A459_MK2206_30min_R1 3 SPDKPGGSPSASR 13 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 SPDKPGGS(0.983)PS(0.017)ASR;SPDKPGGS(0.671)PS(0.308)AS(0.021)R;SPDKPGGS(0.963)PS(0.037)ASR 165.24 0.0017206 106277000 4061.4 4127.9 3877.9 3516.84 3070.25 2896.98 3884.5 3373.17 3076.75 3382.8 TRUE FALSE 3715.956603 3859.17296 3614.678952 3787.707626 2947.955441 3061.004504 3625.372093 3343.67873 3396.589173 3801.886803 0.977398012 1.015067823 0.950759226 0.99627049 0.775392744 0.805127733 0.953571813 0.87947877 0.893395661 1 11.89249986 -6.217504223 24.99479666 0.877953873 0.984593878 0.380593527 0.062400412 475.2143755 270350.1898 0.018603217 0.02401656 6.06E-07 6.217504223 0.106640006 SPDKPGGS(ph)PSASR ddPTM_A459_MK2206_30min_R2 1 SPDKPGGSPSASR 13 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 SPDKPGGS(0.997)PS(0.002)ASR 105.17 0.035088 14840000 5907.4 5635.7 4646.7 5986.6 7354 4878.6 7211.9 6636.2 5530.3 5117.3 TRUE FALSE 6359.675086 5355.839333 4801.618659 5497.47563 7065.245009 5064.258542 6264.968867 7503.574125 6011.315498 4950.32292 1.284699037 1.081917164 0.969960695 1.11052869 1.427229117 1.023015796 1.265567715 1.515774677 1.214327953 1 12.27330692 -6.042984979 24.66275616 1.258175584 1.097678017 0.122262108 0.164440076 708.6022305 406561.2277 0.04850042 0.062618789 9.06E-07 6.042984979 -0.160497567 SPDLEAS(ph)LDTLENNCHVGSDIDFRPK ddPTM_A459_MK2206_30min_R2 1 SPDLEASLDTLENNCHVGSDIDFRPK 26 1 Q13111;Q13111-3;Q13111-2;K7EJF1 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 S(0.371)PDLEAS(0.587)LDT(0.042)LENNCHVGSDIDFRPK 47.564 0.020685 4462500 4928.9 6853.9 6254.3 6835.9 7588.8 5740.5 8705.8 5409.4 5939.3 8681.3 TRUE FALSE 5306.260374 6513.545293 6462.81524 6277.385103 7290.825581 5958.95875 7562.718002 6116.427153 6455.889578 8398.029892 0.631845855 0.775603966 0.769563258 0.747483063 0.868159041 0.709566271 0.90053478 0.728316907 0.768738581 1 13.03583521 -14.52287875 0.173686606 1.876982887 0.721215196 0.517001644 0.069705759 111.1222973 1.053333784 33.80515124 0.231800348 3.00E-15 14.52287875 -1.155767691 SPDPRDPPAFAPQS(ph)ARITGMSHHAR ddPTM_A459_MK2206_30min_R1 1 SPDPRDPPAFAPQSARITGMSHHAR 25 2 J3QKQ5 J3QKQ5 KPNB1 1 SPDPRDPPAFAPQS(0.738)ARIT(0.232)GMS(0.03)HHAR 55.819 0.014157 26077000 3021.7 3341.6 3216.1 3038.2 3620.5 3549.2 3430.1 3475.1 2712.4 2847 TRUE FALSE 2764.688547 3124.061233 2997.800093 3272.20269 3476.287818 3750.152637 3201.284288 3444.717567 2994.363686 3199.707854 0.864044055 0.976358273 0.936898064 1.022656705 1.08643913 1.1720297 1.000492681 1.076572526 0.935824089 1 11.64372447 -5.80839006 3.014363141 1.053487266 0.926986912 0.405573226 0.064541474 0.250413072 4.630756851 0.019069441 0.032177829 1.55E-06 5.80839006 -0.126500354 SPEKIEEVLSPEGSPS(ph)KSPSK ddPTM_A459_MK2206_30min_R2 2 SPEKIEEVLSPEGSPSKSPSK 21 2 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 SPEKIEEVLSPEGS(0.016)PS(0.435)KS(0.435)PS(0.115)K;SPEKIEEVLSPEGS(0.014)PS(0.45)KS(0.45)PS(0.086)K 62.617 0.0057272 18375600 45146 107607 83038 102442 101931 63247 103595 86060 90878 76613 TRUE FALSE 48602.41247 102263.3929 85806.44548 94072.1609 97928.67678 65653.9089 89992.85206 97308.33749 98782.40417 74113.12408 0.655786854 1.379828392 1.157776663 1.269305026 1.321340559 0.885860766 1.214263373 1.312970391 1.332859806 1 16.17744142 -4.750617376 24.99492599 1.212004113 0.655785673 0.552409268 0.149152333 357.8127094 826364.3972 0.036876646 0.532233787 1.78E-05 4.750617376 -0.556218439 SPESSESQTSQS(ph)ESR ddPTM_A459_MK2206_30min_R1 1 SPESSESQTSQSESR 15 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 SPESSES(0.001)QT(0.004)S(0.04)QS(0.477)ES(0.477)R 101.2 0.0070975 1028700 312.07 0 225.21 177.68 226.49 223.9 271.31 157.11 192.81 254.95 TRUE FALSE 285.5268078 0 209.9233727 191.3649444 217.4684237 236.5770245 253.2114049 155.7364038 212.8532895 286.5351308 0.996480979 0 0.732626998 0.667858576 0.758959026 0.825647535 0.883701081 0.543515915 0.74285233 1 8.162568222 -5.481215437 24.99912473 0.756919989 0.465258675 0.153687215 0.251440425 749.9921862 450014.5354 0.060849404 0.126647091 3.30E-06 5.481215437 -0.291661315 SPESSESQTSQSES(ph)R ddPTM_A459_MK2206_30min_R2 2 SPESSESQTSQSESR 15 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 SPESSESQTSQS(0.199)ES(0.801)R;SPESSESQTSQS(0.029)ES(0.971)R 223.68 4.10E-14 2149100 6450.8 6794 6870.2 5134 6241.2 6501.2 7592.4 6044.1 6422.2 7336.6 TRUE FALSE 6944.678208 6456.619839 7099.249039 4714.535777 5996.139128 6748.607722 6595.50876 6834.084622 6980.791347 7097.207343 0.97850857 0.909740906 1.000287676 0.664280406 0.844858948 0.950882142 0.929310423 0.962925879 0.983596929 1 12.79303574 -6.851535826 6.27361 0.962015234 0.876172484 0.194824484 0.087128108 0.406556684 23.18409219 0.03287338 0.02905732 1.41E-07 6.851535826 -0.08584275 SPFEVQVGPEAGMQK ddPTM_A459_MK2206_30min_R1 1 SPFEVQVGPEAGMQK 15 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 0 163.51 0.015171 7021600 1551.3 1715.8 1742.7 1406.5 1291.1 1356.1 1771.9 1279.3 1498.2 1061.3 FALSE TRUE 1419.353789 1604.101108 1624.410379 1514.828874 1239.672753 1432.88121 1653.699784 1268.115215 1653.943251 1192.781856 1.189952531 1.344840299 1.36186711 1.269996576 1.039312215 1.2012936 1.386422651 1.0631577 1.386626769 1 10.2201145 -11.45970182 2.67602003 0.832666064 1.246979368 0.278848129 0.120211013 9123891.895 4885055.372 9502252.529 0.029849368 3.47E-12 11.45970182 0.414313304 SPFNSPS(ph)PQDSPR ddPTM_A459_MK2206_30min_R1 1 SPFNSPSPQDSPR 13 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 S(0.001)PFNS(0.08)PS(0.919)PQDSPR 195.5 0.00020241 16832000 1529.4 1935.6 1557.9 1087.4 1446.3 1661.9 1885.8 1333 1696.4 1859.4 TRUE FALSE 1399.316499 1809.592088 1452.154089 1171.151736 1388.690808 1755.995342 1760.001723 1321.345722 1872.746851 2089.75651 0.669607436 0.865934419 0.694891525 0.560424973 0.664522781 0.840287054 0.842204206 0.632296497 0.896155529 1 11.02911914 -6.763697423 24.99923844 0.819208173 0.693744122 0.306045486 0.111075191 95.05510919 1052363.407 0.039144728 0.036183681 1.72E-07 6.763697423 -0.125464051 SPFNSPS(ph)PQDSPR ddPTM_A459_MK2206_30min_R2 2 SPFNSPSPQDSPR 13 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 SPFNS(0.081)PS(0.821)PQDS(0.098)PR;SPFNS(0.162)PS(0.837)PQDS(0.001)PR 109.79 0.0058134 52159000 47484 38632 35502 37251 38313 38363 42848 34761 26811 45444 TRUE FALSE 51119.41155 36713.59106 36685.61896 34207.47414 36808.63911 39822.93085 37222.00613 39304.38205 29142.97232 43961.166 1.162831112 0.835136881 0.83450059 0.778129364 0.837298972 0.905866119 0.846701976 0.894070509 0.662925372 1 15.42394203 -4.760910427 24.81110775 0.840014255 1.162831514 0.572974716 0.082553309 7.902784966 370308.2617 0.019195137 0.110372794 1.73E-05 4.760910427 0.322817259 SPFS(ph)VAVSPSLDLSK ddPTM_A459_MK2206_30min_R2 3 SPFSVAVSPSLDLSK 15 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 S(0.019)PFS(0.981)VAVSPSLDLSK;S(0.365)PFS(0.635)VAVSPSLDLSK;S(0.003)PFS(0.995)VAVS(0.001)PS(0.001)LDLSK 140.77 0.00038816 15947400 74672 96049 80911.7 101191 96115 78036.9 105158 76382 79076 97495 TRUE FALSE 80388.94573 91279.34633 83609.25569 92923.37161 92341.04216 81006.64891 91350.62828 86365.38966 85953.88754 94313.74613 0.852356618 0.967826537 0.88650127 0.985257986 0.979083601 0.858906069 0.968582333 0.915724305 0.911361186 1 16.52518044 SPFSVAVSPS(ph)LDLSK ddPTM_A459_MK2206_30min_R1 2 SPFSVAVSPSLDLSK 15 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 SPFSVAVS(0.26)PS(0.74)LDLSK;SPFSVAVS(0.03)PS(0.969)LDLS(0.001)K 119.92 0.0018516 51528000 2251.82 2574.12 2747.97 2344.79 2097.27 2054.18 2362.79 2291.65 1605.25 1762.47 TRUE FALSE 2060.290884 2406.54432 2561.445453 2525.386132 2013.731295 2170.485896 2205.17259 2271.614346 1772.121482 1980.81809 1.040121198 1.214924446 1.293125031 1.274920774 1.016615966 1.095752259 1.113263556 1.146806139 0.894641205 1 10.95188068 -7.497386766 0.636909287 0.976257511 1.196185173 0.369464615 0.095744486 0.87486439 0.70584361 0.092681172 0.056514376 3.18E-08 7.497386766 0.219927662 SPGAGSLGS(ph)PASQR ddPTM_A459_MK2206_30min_R2 3 SPGAGSLGSPASQR 14 0 E9PC47;P53667-4;P53667-2;P53667 E9PC47 LIMK1 LIM domain kinase 1 1 SPGAGSLGS(0.997)PAS(0.003)QR;SPGAGSLGS(0.999)PAS(0.001)QR;S(0.002)PGAGS(0.109)LGS(0.82)PAS(0.069)QR 182.7 7.63E-05 60008000 79481 112859 90472 116088 99169 96185 105737 66948 100096 103022 TRUE FALSE 85566.12647 107254.5862 93488.29132 106603.2391 95275.12678 99845.38758 91853.60489 75698.33347 108802.1691 99660.40058 0.858576987 1.076200633 0.938068589 1.069664967 0.955997831 1.001856174 0.921666021 0.759562806 1.091729198 1 16.60473275 -7.268501649 23.13633262 0.923203059 0.988228526 0.021642959 0.097979785 509.4710099 1669033.884 0.038022749 0.026305889 5.39E-08 7.268501649 0.065025467 SPGAPSAGEAEARPSPSTTPLPDS(ph)SPSR ddPTM_A459_MK2206_30min_R2 1 SPGAPSAGEAEARPSPSTTPLPDSSPSR 28 1 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 SPGAPS(0.002)AGEAEARPS(0.086)PS(0.052)T(0.052)T(0.044)PLPDS(0.348)S(0.348)PS(0.067)R 46.307 0.025762 7050400 6112.9 8258.4 7341.2 7628.6 9980.3 7009.6 8402.2 8248.4 6574.8 8424.4 TRUE FALSE 6580.908324 7848.299865 7585.951944 7005.318977 9588.423275 7276.35524 7298.981047 9326.494201 7146.664219 8149.512518 0.807521715 0.963039181 0.930847327 0.859599757 1.176564028 0.892857729 0.895634068 1.144423569 0.876943769 1 12.99249805 -3.558803173 0.749935071 0.985451389 2.00E-12 0.178954672 0.104094505 26.08198241 2.722524651 0.038388136 32.87957629 0.000276183 3.558803173 -0.985451389 SPGDFT(ph)SAAQLASTPFHK ddPTM_A459_MK2206_30min_R1 1 SPGDFTSAAQLASTPFHK 18 0 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 S(0.135)PGDFT(0.859)S(0.006)AAQLASTPFHK 120.59 0.0012881 13040000 6687.1 5331.7 6476.1 5367.9 6794.1 5938.3 6095.8 5973 4937.3 4366.2 TRUE FALSE 6118.32703 4984.605361 6036.520375 5781.336588 6523.47661 6274.521414 5689.160304 5920.778691 5450.550003 4907.117819 1.246827008 1.015790846 1.230155989 1.178153205 1.329390663 1.278657176 1.159369005 1.206569499 1.110743659 1 12.2606602 -8.558923254 1.891274595 0.999927372 1.20575232 0.404366668 0.078755524 0.412288656 3.338798221 0.078747851 0.022180224 2.76E-09 8.558923254 0.205824948 SPGDPAKPAS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 SPGDPAKPASSPR 13 1 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3;H7C3V8 C9JWC4 HJURP Holliday junction recognition protein 1 SPGDPAKPAS(0.716)S(0.284)PR 154.13 0.0018656 8335600 3378.7 3335.8 3496.7 2778.1 3216.5 2995.7 3352.9 3257.2 3138 3159.1 TRUE FALSE 3091.323823 3118.638814 3259.353746 2992.069743 3088.379994 3165.313945 3129.234159 3228.722644 3464.206329 3550.473158 0.870679395 0.878372734 0.91800546 0.842724226 0.869850258 0.891518906 0.88135694 0.909378131 0.975702723 1 11.79379558 -8.232409307 1.873537332 1.000833945 0.878582683 0.856460513 0.017745419 0.119306414 0.765097147 0.016768455 0.004988139 5.86E-09 8.232409307 -0.122251261 SPGDPAKPASS(ph)PR ddPTM_A459_MK2206_30min_R1 1 SPGDPAKPASSPR 13 1 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3;H7C3V8 C9JWC4 HJURP Holliday junction recognition protein 1 SPGDPAKPAS(0.361)S(0.639)PR 112.03 0.023966 10771000 1781.1 1994 1846.2 1448 1650.5 1427 2191.8 1343.8 1572.8 1374.9 TRUE FALSE 1629.608092 1864.190238 1720.885088 1559.525211 1584.75709 1507.795507 2045.589021 1332.051298 1736.298188 1545.232992 1.054603481 1.206413691 1.113673535 1.009249232 1.025578083 0.975772272 1.323806204 0.862039126 1.123648147 1 10.59360867 -1.522878745 0.158701501 1.00765472 1.466431178 0.044805446 0.119992852 212.6541851 2.189276371 0.361598255 22.75269531 0.03 1.522878745 0.458776459 SPGGGGGGGSGNDNNQAATKS(ph)PR ddPTM_A459_MK2206_30min_R1 2 SPGGGGGGGSGNDNNQAATKSPR 23 1 Q9NS37;E9PIM0;J3KN20 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 SPGGGGGGGSGNDNNQAAT(0.191)KS(0.809)PR;SPGGGGGGGS(0.002)GNDNNQAAT(0.305)KS(0.694)PR 77.233 0.00043306 4158700 624.03 1000.14 920.21 655.35 608.53 744.38 606.53 852.83 590.68 735.61 TRUE FALSE 570.9529716 935.0307042 857.7487091 705.8251706 584.2909615 786.5261523 566.0694904 845.3737972 652.0832998 826.7429204 0.690605214 1.130981205 1.037503543 0.85374202 0.706738391 0.951355171 0.684698322 1.022535272 0.788737688 1 9.691294976 -5.790657488 19.89537058 0.849530401 0.970824579 0.072346704 0.149275538 44.77064883 30484.6589 0.040177508 0.059634296 1.62E-06 5.790657488 0.121294178 SPGGGGGGGSGNDNNQAATKS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SPGGGGGGGSGNDNNQAATKSPR 23 1 Q9NS37;E9PIM0;J3KN20 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 SPGGGGGGGSGNDNNQAAT(0.222)KS(0.778)PR 103.73 1.50E-05 1507400 5039.5 3659 3995.6 4432.2 4913.9 2600.8 4667.7 3503 4213.8 2653.8 TRUE FALSE 5425.327995 3477.299381 4128.81131 4070.075082 4720.955596 2699.775266 4054.825383 3960.854128 4580.308707 2567.206723 2.113319487 1.354506962 1.60828938 1.58540995 1.838946413 1.051639216 1.579469758 1.542865283 1.784160452 1 11.32598376 -11.62591335 2.249377615 0.000127362 1.586380822 0.31179323 0.268832094 5201173.417 1427075.031 26600907.76 0.065228279 2.37E-12 11.62591335 1.586253459 SPGHILCCECGVPIS(ph)PNPANICVACLR ddPTM_A459_MK2206_30min_R2 4 SPGHILCCECGVPISPNPANICVACLR 27 0 C9JA08;Q96D46;C9IY70;C9IZW9;C9K0C2;C9J0B9 C9JA08 NMD3 60S ribosomal export protein NMD3 1 SPGHILCCECGVPIS(1)PNPANICVACLR;SPGHILCCECGVPIS(1)PNPANICVACLR;SPGHILCCECGVPIS(1)PNPANICVACLR;SPGHILCCECGVPIS(1)PNPANICVACLR 117.62 5.19E-10 4199100 8734.3 30852.2 20701.7 36079.2 39634.7 50191.5 35029.5 25561.1 35576.5 19284.7 TRUE FALSE 9403.004724 29320.12461 21391.88435 33131.41395 38078.44253 52101.5727 30430.08457 28902.02353 38670.87966 18655.44182 0.504035488 1.571666053 1.146683341 1.775965119 2.041143968 2.792835099 1.631163972 1.549254304 2.072900767 1 14.18730891 -4.765098843 0.959352765 1.887328528 2.37E-23 0.378372044 0.475832228 2.261521038 1.610086485 0.163652908 4.495279936 1.72E-05 4.765098843 -1.887328528 SPGLVPPS(ph)PEFAPR ddPTM_A459_MK2206_30min_R1 1 SPGLVPPSPEFAPR 14 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 SPGLVPPS(1)PEFAPR 132.23 0.0011925 0 1949 1938.3 1927.4 1358.7 2081 2021.4 2655.7 1725.1 2001.4 2146.1 TRUE FALSE 1783.227315 1812.116318 1796.573458 1463.347309 1998.109363 2135.849921 2478.543099 1710.017633 2209.452692 2411.97507 0.739322449 0.751299771 0.744855733 0.606700843 0.828412113 0.88551907 1.02759897 0.708969862 0.91603463 1 11.23599928 -6.491893093 5.279404513 0.893784736 0.715099312 0.520155628 0.088649135 0.170511204 13.01361515 0.028354087 0.031017077 3.22E-07 6.491893093 -0.178685424 SPGS(ph)NSKVPEIEVTVEGPNNNNPQTSAVR ddPTM_A459_MK2206_30min_R1 1 SPGSNSKVPEIEVTVEGPNNNNPQTSAVR 29 1 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347 A0A494C1K3 GTF2I General transcription factor II-I 1 S(0.078)PGS(0.912)NS(0.01)KVPEIEVTVEGPNNNNPQTSAVR 142.45 1.26E-14 37706000 2071.5 2090.8 1843.5 2596.6 2884.9 1627.9 1592.6 2870.8 1006.1 730.1 TRUE FALSE 1895.308047 1954.68854 1718.368356 2796.590582 2769.988324 1720.070291 1486.36056 2845.700898 1110.687695 820.5503 2.309801175 2.382167845 2.094165777 3.408189092 3.375769071 2.096239915 1.81141919 3.468039556 1.353588799 1 9.680447964 -8.429375909 6.144616911 1.007118017 2.597333134 0.507345387 0.572628804 0.178992839 8.903471246 0.570953386 0.147981363 3.72E-09 8.429375909 1.590215116 SPGS(ph)NSKVPEIEVTVEGPNNNNPQTSAVR ddPTM_A459_MK2206_30min_R2 1 SPGSNSKVPEIEVTVEGPNNNNPQTSAVR 29 1 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347 A0A494C1K3 GTF2I General transcription factor II-I 1 S(0.087)PGS(0.456)NS(0.456)KVPEIEVTVEGPNNNNPQTSAVR 89.08 1.49E-06 18771000 3641.3 17544 12362 19646 28020 20893 17509 10864 30347 10382 TRUE FALSE 3920.080728 16672.79047 12774.14291 18040.85896 26919.79401 21688.09776 15210.04727 12283.9621 32986.52721 10043.23619 0.390320476 1.660101401 1.271915015 1.796319295 2.680390414 2.159473037 1.514456793 1.223107957 3.284452001 1 13.2939366 -4.791290191 1.149398751 1.955066492 2.40E-12 0.29937538 0.666688946 2.133668057 2.374940394 0.20442441 5.048527337 1.62E-05 4.791290191 -1.955066492 SPGS(ph)PPGPELPIETALDDR ddPTM_A459_MK2206_30min_R1 2 SPGSPPGPELPIETALDDR 19 0 F5GZI3;B1AP52;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.005)PGS(0.995)PPGPELPIETALDDR;S(0.384)PGS(0.616)PPGPELPIETALDDR 187.5 2.53E-15 24348000 1202.41 1183.07 1493.78 1331.66 1242.2 1143.68 1616.42 1234.42 1276.05 1461.72 TRUE FALSE 1100.138715 1106.051928 1392.386376 1434.224684 1192.720544 1208.434173 1508.591571 1223.627596 1408.699964 1642.808909 0.669669314 0.673268767 0.847564417 0.873031961 0.726025125 0.735590224 0.918300091 0.744838666 0.857494719 1 10.68194896 -14.52287875 0.0576385 1.782234367 0.438744971 0.517117308 0.073013058 396.6503236 1.66893496 44.89477244 7.982496718 3.00E-15 14.52287875 -1.343489396 SPGS(ph)PPGPELPIETALDDR ddPTM_A459_MK2206_30min_R2 2 SPGSPPGPELPIETALDDR 19 0 F5GZI3;B1AP52;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 SPGS(1)PPGPELPIETALDDR;S(0.002)PGS(0.998)PPGPELPIETALDDR 120.99 0.00043181 27736000 36402 40242 39698 38832 33967 38987 45665 32879 33168 38682 TRUE FALSE 39188.96511 38243.6408 41021.51151 35659.30138 32633.28491 40470.6776 39669.13065 37176.39819 36052.89269 37419.80951 1.047278584 1.022015914 1.096251211 0.95295251 0.872085811 1.081530829 1.060110438 0.993495121 0.96347077 1 15.19151459 -5.765198831 24.98110104 0.990756613 1.051865302 0.220283743 0.056816742 169.4518768 1125999.313 0.017234984 0.026723925 1.72E-06 5.765198831 0.061108689 SPGS(ph)PPGPELPIETALDDRER ddPTM_A459_MK2206_30min_R2 1 SPGSPPGPELPIETALDDRER 21 1 F5GZI3;B1AP52;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.465)PGS(0.531)PPGPELPIET(0.005)ALDDRER 51.577 0.02888 2865600 2776.7 8266.1 6242.6 6418.3 7694.7 7445.5 6788 5023.1 5728.2 5879.3 TRUE FALSE 2989.286287 7855.617494 6450.725168 5893.904359 7392.567415 7728.84372 5896.727446 5679.636417 6226.428482 5687.458922 0.525592594 1.381217447 1.134201628 1.036298361 1.299801461 1.358927392 1.036794731 0.998624604 1.094764563 1 12.47356851 -4.748168949 24.99924239 1.152704325 0.525591078 0.642969141 0.139329764 437.019901 823223.3607 0.03603233 0.676261321 1.79E-05 4.748168949 -0.627113247 SPGS(ph)PVGEGTGSPPK ddPTM_A459_MK2206_30min_R1 4 SPGSPVGEGTGSPPK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 SPGS(1)PVGEGTGSPPK;SPGS(1)PVGEGTGSPPK;S(0.001)PGS(0.998)PVGEGT(0.002)GSPPK;SPGS(1)PVGEGTGSPPK 223.14 1.08E-09 51917000 18330.3 17728 17776.9 13597.9 15853.1 15591.5 18420.3 15879.5 17271.8 17874.5 TRUE FALSE 16771.21173 16573.90398 16570.25356 14645.21261 15221.63746 16474.27726 17191.5154 15740.66721 19067.26542 20088.92801 0.834848516 0.825026799 0.824845086 0.72901912 0.757712779 0.820067514 0.855770671 0.783549386 0.949143001 1 14.29411296 -8.37574783 3.621977024 0.997877491 0.803296113 0.780728244 0.036534594 0.110357746 2.472990558 0.038108955 0.010154941 4.21E-09 8.37574783 -0.194581378 SPGS(ph)PVGEGTGSPPK ddPTM_A459_MK2206_30min_R2 6 SPGSPVGEGTGSPPK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 SPGS(1)PVGEGTGSPPK;SPGS(1)PVGEGTGSPPK;SPGS(1)PVGEGTGSPPK;S(0.001)PGS(0.999)PVGEGTGSPPK;S(0.001)PGS(0.999)PVGEGTGSPPK;SPGS(1)PVGEGTGSPPK 238.83 5.21E-20 702058900 671756 659851 678937 727204 667558 566360 752669 568924 504983 664851 TRUE FALSE 723186.1559 627083.7589 701572.4207 667789.107 641346.3187 587913.2267 653842.6562 643284.3202 548905.5085 643156.9663 1.124431816 0.975008888 1.090826124 1.038298801 0.99718475 0.914105354 1.016614435 1.000198014 0.853454969 1 19.29481135 -6.355614087 2.952138489 0.960352984 1.055023801 0.403241533 0.05726477 0.291173649 4.916297468 0.018289556 0.021467009 4.41E-07 6.355614087 0.094670817 SPGS(ph)TPTTPT(ph)SSQAPQK ddPTM_A459_MK2206_30min_R1 1 SPGSTPTTPTSSQAPQK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5 P35658-4 NUP214 Nuclear pore complex protein Nup214 2 S(0.019)PGS(0.761)T(0.22)PT(0.003)T(0.063)PT(0.745)S(0.156)S(0.033)QAPQK 122.46 0.010703 0 569.69 870.76 922.47 627.21 617.32 476.14 462.18 504.81 436.77 364.08 TRUE FALSE 521.2348739 814.0733657 859.8553065 675.5178229 592.7308372 503.0986353 431.3488155 500.3964994 482.1738045 409.1849791 1.273836775 1.989499633 2.101385316 1.65088617 1.448564506 1.229513939 1.054165811 1.222910236 1.178376111 1 8.676609375 -6.479372843 1.851338164 1.135856004 1.808293072 0.652580335 0.213139133 0.214842028 1.476385157 0.081103507 0.091014427 3.32E-07 6.479372843 0.672437068 SPGS(ph)TPTTPT(ph)SSQAPQK ddPTM_A459_MK2206_30min_R2 2 SPGSTPTTPTSSQAPQK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5 P35658-4 NUP214 Nuclear pore complex protein Nup214 2 S(0.007)PGS(0.925)T(0.068)PT(0.011)T(0.078)PT(0.33)S(0.29)S(0.29)QAPQK;S(0.01)PGS(0.758)T(0.231)PTT(0.015)PT(0.791)S(0.161)S(0.033)QAPQK 154.47 0.0083432 75527000 43911 55068 47449 50167 42041 37794 46846 35039 31054 36014 TRUE FALSE 47272.85992 52333.4032 49030.92598 46068.19562 40390.2591 39232.27715 40695.06393 39618.71761 33755.02079 34838.86613 1.356900071 1.502155753 1.407362851 1.322321899 1.159344823 1.126106602 1.168093812 1.137198824 0.968889764 1 15.08841005 -6.305690239 0.707013276 1.045032112 1.475090995 0.859347487 0.062436934 0.28650245 0.310359526 0.040495533 0.069546503 4.95E-07 6.305690239 0.430058883 SPGS(ph)TPTTPTSSQAPQK ddPTM_A459_MK2206_30min_R1 2 SPGSTPTTPTSSQAPQK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 S(0.004)PGS(0.916)T(0.078)PT(0.002)TPTSSQAPQK;S(0.027)PGS(0.762)T(0.178)PT(0.032)TPTSSQAPQK 270.79 1.22E-51 92180000 7800.7 7817.2 7880.8 5823.9 7712 7333.7 9091.8 7540.3 7588.2 7669.3 TRUE FALSE 7137.209502 7308.298859 7345.873253 6272.457787 7404.81471 7748.927756 8485.302611 7474.375952 8377.020545 8619.430784 0.82803722 0.847886484 0.85224575 0.72771137 0.859083958 0.899006901 0.98443886 0.86715424 0.971876305 1 13.07337688 -6.795819657 2.674786771 0.94414696 0.817621008 0.634194516 0.047725449 0.189538592 2.775396264 0.01790808 0.016268143 1.60E-07 6.795819657 -0.126525952 SPGS(ph)TPTTPTSSQAPQK ddPTM_A459_MK2206_30min_R2 1 SPGSTPTTPTSSQAPQK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 S(0.037)PGS(0.948)T(0.015)PTTPTSSQAPQK 249.89 1.64E-30 58378000 22983 26378 22242 27677 25666 24211 31975 21176 20486 28551 TRUE FALSE 24742.59615 25068.10688 22983.53718 25415.70057 24658.22388 25132.36657 27776.64409 23943.77591 22267.83525 27619.38321 0.895841734 0.907627324 0.832152442 0.92021246 0.892786913 0.90995394 1.005693859 0.866919284 0.806239411 1 14.75339348 SPGSNS(ph)KVPEIEVTVEGPNNNNPQTSAVR ddPTM_A459_MK2206_30min_R1 1 SPGSNSKVPEIEVTVEGPNNNNPQTSAVR 29 1 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347 A0A494C1K3 GTF2I General transcription factor II-I 1 S(0.426)PGS(0.13)NS(0.443)KVPEIEVT(0.002)VEGPNNNNPQTSAVR 108.3 6.58E-11 39113000 1471.2 1489.3 1281.8 1746.3 1858.7 1145.1 1190.4 1623.1 753.52 362.87 TRUE FALSE 1346.066714 1392.346299 1194.794987 1880.800329 1784.664043 1209.934572 1110.990588 1608.909408 831.8511005 407.8250751 3.300598214 3.414077221 2.929675148 4.61178197 4.376052754 2.96679789 2.724184107 3.945096822 2.039725243 1 8.671806672 -8.470067099 3.468225446 1.009293972 3.524903807 0.665759817 0.59183517 0.132021524 3.383925811 0.608568468 0.161012167 3.39E-09 8.470067099 2.515609834 SPGSPVGEGT(ph)GSPPKWQIGEQEFEALMR ddPTM_A459_MK2206_30min_R1 1 SPGSPVGEGTGSPPKWQIGEQEFEALMR 28 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 S(0.158)PGS(0.158)PVGEGT(0.548)GS(0.136)PPKWQIGEQEFEALMR 71.427 0.00051846 17098000 2508.7 2444.4 2337.2 2507.8 3727.1 2583.1 2111.5 3320.6 1365.8 590.31 TRUE FALSE 2295.321891 2285.269116 2178.557376 2700.951191 3578.641715 2729.35289 1970.645688 3291.568344 1507.779798 663.4420594 3.459717181 3.444564726 3.28371912 4.071118423 5.394053126 4.113928038 2.970335781 4.961350125 2.272662362 1 9.373826666 -8.496504752 4.864615666 1.004698207 3.939006594 0.650306119 0.712431224 0.101482893 6.849445544 0.716105885 0.186449051 3.19E-09 8.496504752 2.934308387 SPGST(ph)PTT(ph)PTSSQAPQK ddPTM_A459_MK2206_30min_R1 1 SPGSTPTTPTSSQAPQK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5 P35658-4 NUP214 Nuclear pore complex protein Nup214 2 S(0.24)PGS(0.079)T(0.684)PT(0.163)T(0.518)PT(0.256)S(0.057)S(0.003)QAPQK 120.32 0.012075 7222100 2395.7 2178.9 2006.9 1469.4 1652.8 1334.5 1809.9 1560.8 1441.7 1978.3 TRUE FALSE 2191.933135 2037.053214 1870.67722 1582.573443 1586.965476 1410.058237 1689.164873 1547.15409 1591.569874 2223.386739 0.985853291 0.916193831 0.841363847 0.711785051 0.71376043 0.634193868 0.759726072 0.69585469 0.715831324 1 11.1185432 -5.395985345 1.903788543 0.728649506 0.971563502 0.424277485 0.093531952 0.304357834 2.057783732 0.025270255 0.082349338 4.02E-06 5.395985345 0.242913997 SPGST(ph)PTTPT(ph)SSQAPQK ddPTM_A459_MK2206_30min_R1 3 SPGSTPTTPTSSQAPQK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5 P35658-4 NUP214 Nuclear pore complex protein Nup214 2 S(0.194)PGS(0.25)T(0.552)PT(0.09)T(0.301)PT(0.483)S(0.107)S(0.024)QAPQK;S(0.047)PGS(0.093)T(0.855)PT(0.008)T(0.198)PT(0.631)S(0.138)S(0.031)QAPQK;S(0.002)PGS(0.407)T(0.591)PT(0.009)T(0.028)PT(0.529)S(0.364)S(0.071)QAPQK 142.74 0.0040879 34334800 11192.9 10789.9 10039.1 8091.8 8847.8 8607.3 8810.5 7899.8 8991.1 8569.9 TRUE FALSE 10240.88508 10087.47555 9357.673863 8715.031838 8495.37339 9094.637888 8222.767621 7830.732881 9925.75702 9631.603911 1.063258536 1.047330812 0.971559249 0.904837026 0.882031017 0.944249574 0.853727759 0.813024804 1.030540408 1 13.23356035 -5.42932005 2.192993832 0.907127996 1.06205775 0.432140914 0.061434801 0.273682644 2.521281168 0.017062894 0.04759761 3.72E-06 5.42932005 0.154929754 SPGST(ph)PTTPTS(ph)SQAPQK ddPTM_A459_MK2206_30min_R2 1 SPGSTPTTPTSSQAPQK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5 P35658-4 NUP214 Nuclear pore complex protein Nup214 2 SPGS(0.04)T(0.96)PT(0.002)T(0.217)PT(0.29)S(0.42)S(0.071)QAPQK 166.77 0.00024311 10854000 48457 48205 44501 43034 42988 31955 35933 30342 33425 39662 TRUE FALSE 52166.90518 45811.2098 45984.64113 39517.98454 41300.07512 33171.06992 31214.95394 34307.80358 36332.24608 38367.83219 1.359652141 1.194000473 1.198520701 1.029976996 1.076424514 0.864554186 0.813570957 0.894181444 0.946945501 1 15.22760963 -5.750626879 0.831551547 0.893654335 1.343470963 0.824927122 0.068238434 0.336968703 0.415231046 0.031417773 0.108632337 1.78E-06 5.750626879 0.449816629 SPGSTPTT(ph)PTSSQAPQK ddPTM_A459_MK2206_30min_R1 1 SPGSTPTTPTSSQAPQK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SPGS(0.003)T(0.018)PT(0.142)T(0.835)PT(0.001)SSQAPQK 140.93 0.00056128 0 1063.3 991.12 870.97 750.69 859.13 553.86 796.47 692.94 717.95 620.95 TRUE FALSE 972.8607514 926.5979079 811.8509831 808.5082739 824.9090329 585.2190746 743.3389395 686.8816986 792.5834717 697.8779739 1.394027019 1.327736284 1.163313664 1.158523845 1.182024743 0.838569344 1.065141711 0.984243269 1.135704953 1 9.446830989 -5.338528622 0.751200571 1.014965427 1.482147032 0.691850491 0.086086904 0.841378569 0.603052444 0.038697431 0.291785508 4.59E-06 5.338528622 0.467181605 SPGSTPTT(ph)PTSSQAPQK ddPTM_A459_MK2206_30min_R2 2 SPGSTPTTPTSSQAPQK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SPGS(0.001)T(0.038)PT(0.027)T(0.808)PT(0.061)S(0.027)S(0.038)QAPQK;SPGSTPT(0.056)T(0.457)PT(0.172)S(0.237)S(0.077)QAPQK 107.63 0.0056708 19059100 59779 56747 53583 55526 50843 51624 47797 48332 41518 43194 TRUE FALSE 64355.7262 53929.0265 55369.43048 50989.34818 48846.64835 53588.58749 41521.19649 54649.15835 45129.16059 41784.58332 1.540178724 1.290644114 1.325116253 1.220290933 1.169011259 1.282496635 0.993696555 1.307878505 1.080043332 1 15.35068313 -1.522878745 0.277350948 1.084115624 4.076246162 0.636560138 0.095696306 34.30724447 0.482500392 0.102166536 49.58428342 0.03 1.522878745 2.992130538 SPGSTPTTPTS(ph)SQAPQK ddPTM_A459_MK2206_30min_R2 1 SPGSTPTTPTSSQAPQK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SPGS(0.001)T(0.006)PT(0.009)T(0.196)PT(0.066)S(0.628)S(0.094)QAPQK 125.39 0.0012502 7100700 40589 45134 39723 42115 37511 45025 35536 29933 36043 39598 TRUE FALSE 43696.52505 42892.71119 41047.34499 38674.06978 36038.12966 46738.45793 30870.08051 33845.34588 39177.95499 38305.9205 1.140725101 1.119741038 1.0715666 1.009610767 0.940797902 1.220136661 0.805882749 0.883553911 1.022765005 1 15.22527977 -5.405268735 0.511384574 0.947309018 1.212241701 0.274174749 0.10025113 3.332888479 1.051967888 0.070672562 0.493324702 3.93E-06 5.405268735 0.264932683 SPHQLLS(ph)PSSFSPSATPSQK ddPTM_A459_MK2206_30min_R2 1 SPHQLLSPSSFSPSATPSQK 20 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 1 S(0.129)PHQLLS(0.869)PS(0.002)S(0.001)FSPSATPSQK 95.742 0.00068601 22768000 14692 22470 21030 28347 23371 24593 31872 24079 22563 22891 TRUE FALSE 15816.83082 21354.17247 21731.1297 26030.95942 22453.33711 25528.90385 27687.16811 27226.20798 24525.48896 22144.06854 0.714269412 0.964329226 0.981352169 1.175527405 1.013966203 1.152855167 1.250319834 1.229503419 1.107542135 1 14.43463269 -4.175987691 0.698616001 1.155898232 3.35E-16 0.703862275 0.082486444 3.368336777 0.679487481 0.033725158 3.736679551 6.67E-05 4.175987691 -1.155898232 SPHQLLSPSSFS(ph)PSATPSQK ddPTM_A459_MK2206_30min_R2 2 SPHQLLSPSSFSPSATPSQK 20 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 1 SPHQLLSPSS(0.001)FS(0.958)PS(0.009)AT(0.031)PS(0.002)QK;SPHQLLSPSS(0.005)FS(0.99)PS(0.005)ATPSQK 157.49 9.63E-07 16467200 42956 78995 45845 88557 88158 98337 76952 48406 61290 48882 TRUE FALSE 46244.74439 75072.22317 47373.44942 81321.60982 84696.47396 102079.2834 66848.10996 54732.8304 66620.89341 47286.98434 0.977959264 1.587587456 1.001828517 1.719746162 1.791115994 2.158718406 1.413668283 1.157460793 1.408863228 1 15.52915552 -5.768722715 24.99291253 1.561236747 1.228971305 0.152366866 0.346579948 317.2171164 1088539.973 0.101995779 0.154845514 1.70E-06 5.768722715 -0.332265442 SPIS(ph)PELHSAPLTPVAR ddPTM_A459_MK2206_30min_R2 1 SPISPELHSAPLTPVAR 17 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 S(0.169)PIS(0.831)PELHSAPLTPVAR 88.282 0.006724 6913500 10214 13229 12038 10738 12158 12288 12602 11356 11344 11232 TRUE FALSE 10995.99169 12572.0671 12439.34091 9860.671051 11680.61583 12755.62845 10947.34226 12840.26819 12330.68061 10865.50076 1.012009657 1.157062834 1.144847457 0.907521086 1.075018638 1.173956795 1.007532235 1.181746564 1.13484697 1 13.40746705 -6.535428603 24.9650052 1.10736122 1.059298314 0.051193406 0.086235129 714.6022737 1421525.668 0.028722109 0.028742553 2.91E-07 6.535428603 -0.048062906 SPISFLS(ph)K ddPTM_A459_MK2206_30min_R1 1 SPISFLSK 8 0 Q7RTP6;A0A5F9ZHV5;J3KSK6;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 SPISFLS(1)K 97.602 0.020136 4212800 1473.3 1298.9 1249.5 1025.5 1203.8 1512.7 1332.5 1322.8 1207.8 1038.6 TRUE FALSE 1347.988098 1214.341374 1164.687421 1104.484188 1155.850097 1598.347767 1243.611356 1311.234899 1333.355132 1167.269609 1.154821549 1.040326386 0.997787839 0.946211723 0.990216903 1.369304704 1.065401983 1.12333508 1.142285486 1 10.18892211 SPITS(ph)SPPK ddPTM_A459_MK2206_30min_R2 1 SPITSSPPK 9 0 G3V5T8;Q52LA3 G3V5T8;Q52LA3 LIN52 Protein lin-52 homolog 1 SPIT(0.027)S(0.597)S(0.375)PPK 82.261 0.041788 18181000 181340 153850 172250 149730 132980 113910 178120 157520 90851 195230 TRUE FALSE 195223.5298 146210.0327 177992.729 137496.58 127758.537 118244.9249 154732.63 178108.4048 98753.05576 188859.6611 1.033696284 0.774172906 0.94246028 0.728035724 0.6764734 0.626099423 0.819299522 0.943072776 0.522891205 1 17.52695506 -1.522908078 0.884938535 0.761138514 116.8297137 0.21015496 0.144250945 1266.14675 2.984034818 0.047032128 296545.3856 0.029997974 1.522908078 116.0685751 SPITSS(ph)PPK ddPTM_A459_MK2206_30min_R2 1 SPITSSPPK 9 0 G3V5T8;Q52LA3 G3V5T8;Q52LA3 LIN52 Protein lin-52 homolog 1 SPIT(0.002)S(0.144)S(0.854)PPK 99.283 0.018946 25896000 124320 107490 129150 99151 93191 79564 137460 111750 82697 123500 TRUE FALSE 133838.0348 102152.2029 133455.7965 91050.04613 89531.85309 82591.86377 119411.3369 126356.1087 89889.83558 119470.2051 1.120262869 0.855043337 1.117063425 0.76211509 0.749407377 0.691317669 0.999507256 1.057636995 0.752403794 1 16.86629134 -5.763721619 24.99966467 0.855626415 1.013215218 0.245783487 0.136855723 96.19604952 1053753.252 0.039668175 0.062180942 1.72E-06 5.763721619 0.157588803 SPIYPLS(ph)DSETSACR ddPTM_A459_MK2206_30min_R2 1 SPIYPLSDSETSACR 15 0 E9PRS6;E9PI72;E9PLB6;E9PII1;E9PK36;E9PN93;E9PQU6;E9PME1;E9PMP1;E9PLH6;E9PMJ9;E9PJY5;E9PLR2;E9PM84;P78524 E9PRS6 ST5 Suppression of tumorigenicity 5 protein 1 SPIYPLS(0.573)DS(0.316)ET(0.02)S(0.092)ACR 95.822 0.018028 0 8652.9 7284.3 5630.5 7447.1 6229.8 7388.9 7019.6 5933.6 5828.6 6303.2 TRUE FALSE 9315.372677 6922.572254 5818.21806 6838.648108 5985.18675 7670.089767 6097.918088 6709.141893 6335.561092 6097.5271 1.527729606 1.135308157 0.954193063 1.121544521 0.98157608 1.25790171 1.000064122 1.100305383 1.039037792 1 12.57400855 -4.774719867 3.894315326 1.063960184 1.575184299 0.737463103 0.083755442 0.116520108 3.231744383 0.019772817 0.171735624 1.68E-05 4.774719867 0.511224115 SPLAQMEEERR ddPTM_A459_MK2206_30min_R1 2 SPLAQMEEERR 11 1 E7EPK1;G3V1Q4;Q16181;Q16181-2;E7ES33;A0A0U1RRM2 E7EPK1 Sep-07 Septin-7 0 ; 127.83 0.014373 56054000 4200.3 4494.8 3864.1 2944.8 4711.6 4267.4 4843.9 4745.6 3036.9 2604.2 FALSE TRUE 3843.042428 4202.187703 3601.815658 3171.609006 4523.926995 4509.0165 4520.772269 4704.10972 3352.596623 2926.827957 1.313040085 1.435748109 1.230620901 1.083633563 1.545675749 1.540581328 1.544597884 1.607238208 1.145471026 1 11.51512223 -6.282127702 24.72501535 1.442155491 1.275392598 0.066504371 0.201886425 1448.812883 1731499.957 0.061515828 0.069831373 5.22E-07 6.282127702 -0.166762893 SPLDPMT(ph)SPGSGLILQANFVHSQR ddPTM_A459_MK2206_30min_R2 1 SPLDPMTSPGSGLILQANFVHSQR 24 0 A0A1B0GW84;Q08499-11;Q08499-2;Q08499-10;A0A087WSZ7;Q08499;A0A1W2PQN6;Q08499-6;Q08499-7;Q08499-12;Q08499-9 A0A1B0GW84;Q08499-6;Q08499-9 PDE4D "cAMP-specific 3,5-cyclic phosphodiesterase 4D" 1 S(0.069)PLDPMT(0.51)S(0.412)PGS(0.009)GLILQANFVHSQR 66.511 0.0034408 7090700 47273 42422 50200 46780 49961 57703 76325 45417 76473 67486 TRUE FALSE 50892.25723 40315.38517 51873.64294 42957.92436 47999.28011 59898.9281 66303.43582 51353.15784 83124.48331 65283.93735 0.77955251 0.617539119 0.794585086 0.658016751 0.735238744 0.917514025 1.015616375 0.786612449 1.273276195 1 15.99444045 -7.06255649 0.993792911 1.047463207 0.698096707 0.590179951 0.119621294 0.382035777 0.76877447 0.076490917 0.051933098 8.66E-08 7.06255649 -0.3493665 SPLDPMTS(ph)PGSGLILQANFVHSQR ddPTM_A459_MK2206_30min_R1 1 SPLDPMTSPGSGLILQANFVHSQR 24 0 A0A1B0GW84;Q08499-11;Q08499-2;Q08499-10;A0A087WSZ7;Q08499;A0A1W2PQN6;Q08499-6;Q08499-7;Q08499-12;Q08499-9 A0A1B0GW84;Q08499-6;Q08499-9 PDE4D "cAMP-specific 3,5-cyclic phosphodiesterase 4D" 1 S(0.021)PLDPMT(0.177)S(0.8)PGS(0.001)GLILQANFVHSQR 112.9 1.59E-07 17848000 4049.9 4496.8 3809.1 3401.6 5038.8 4908.4 5338.9 5335.3 5327.3 4766.7 TRUE FALSE 3705.434738 4204.057503 3550.548905 3663.591821 4838.093926 5186.309366 4982.751722 5288.654035 5881.091899 5357.234783 0.691669282 0.784743935 0.662757756 0.683858739 0.90309537 0.96809447 0.930097695 0.98719848 1.097784984 1 12.38727281 -6.433004445 2.758595185 0.991421789 0.707422358 0.880437898 0.050525037 0.096840661 1.43817441 0.018125377 0.020448806 3.69E-07 6.433004445 -0.283999431 SPLELGEKLS(ph)PLPGGPGAGDPR ddPTM_A459_MK2206_30min_R2 1 SPLELGEKLSPLPGGPGAGDPR 22 1 Q15742;Q15742-2;Q15742-3 Q15742 NAB2 NGFI-A-binding protein 2 1 S(0.001)PLELGEKLS(0.999)PLPGGPGAGDPR 60.86 0.0078229 6378800 30905 36911 35722 35172 36504 28739 34765 32972 29557 37068 TRUE FALSE 33271.11056 35078.05341 36912.95365 32298.33509 35070.66954 29832.68278 30200.31374 37281.55361 32127.81443 35858.4742 0.927845127 0.978236085 1.029406702 0.900716938 0.978030168 0.83195628 0.842208555 1.039686 0.895961559 1 15.13002648 SPLLAGGS(ph)PPQPVVPAHK ddPTM_A459_MK2206_30min_R1 2 SPLLAGGSPPQPVVPAHK 18 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4;C9JIY9 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 S(0.001)PLLAGGS(0.999)PPQPVVPAHK;S(0.001)PLLAGGS(0.999)PPQPVVPAHK 121.21 0.00061952 145731000 13413.2 13304.1 13994.7 11207.6 12524.9 12382.1 14418.9 12426.8 12296.3 10481 TRUE FALSE 12272.3369 12438.00067 13044.77876 12070.81129 12026.00671 13083.1638 13457.04149 12318.1538 13574.54439 11779.46541 1.041841584 1.055905361 1.107416874 1.024733371 1.020929753 1.110675514 1.142415299 1.045731141 1.15239053 1 13.52398645 -6.775569328 24.99451823 1.096361497 1.05225202 0.146268251 0.047135249 421.0296443 744756.1813 0.015956956 0.014140604 1.68E-07 6.775569328 -0.044109476 SPLLAGGS(ph)PPQPVVPAHK ddPTM_A459_MK2206_30min_R2 3 SPLLAGGSPPQPVVPAHK 18 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4;C9JIY9 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 S(0.017)PLLAGGS(0.983)PPQPVVPAHK;SPLLAGGS(1)PPQPVVPAHK;S(0.001)PLLAGGS(0.999)PPQPVVPAHK 139.2 0.00021724 144439500 339099 366012 303563 376528 371426 362280 428558 312504 314675 399464 TRUE FALSE 365060.6802 347836.3763 313683.6389 345764.4579 356841.949 376066.8193 372287.8198 353349.3458 342044.8627 386429.5224 0.944701838 0.900128888 0.811748639 0.89476719 0.923433455 0.973183459 0.963404187 0.914395317 0.885141644 1 18.55984579 -6.32571636 3.467394718 0.943002447 0.882727385 0.296172124 0.042546078 0.33261355 7.94492693 0.014327833 0.016899833 4.72E-07 6.32571636 -0.060275063 SPLLNS(ph)PTVAK ddPTM_A459_MK2206_30min_R1 1 SPLLNSPTVAK 11 0 O43365 O43365 HOXA3 Homeobox protein Hox-A3 1 S(0.059)PLLNS(0.915)PT(0.026)VAK 102.5 0.014215 11295000 3371.2 3442 3196.8 2631.6 3465.7 2799.5 3406 2750.5 2822.2 2310.7 TRUE FALSE 3084.461737 3217.925174 2979.810123 2834.286288 3327.65383 2958.005271 3178.791955 2726.452668 3115.577789 2596.966961 1.187716973 1.239109016 1.147419343 1.091383268 1.281361635 1.139023066 1.224040199 1.04986036 1.199698662 1 11.34261194 -14.52287861 0.189593463 0.247976985 1.203917472 0.400657837 0.064913487 135.3109616 1.318858809 38.26990213 0.171119773 3.00E-15 14.52287861 0.955940487 SPLLNS(ph)PTVAK ddPTM_A459_MK2206_30min_R2 1 SPLLNSPTVAK 11 0 O43365 O43365 HOXA3 Homeobox protein Hox-A3 1 SPLLNS(0.949)PT(0.051)VAK 80.239 0.044163 7743100 43870 40857 47330 47738 41509 39046 47662 32669 36463 46537 TRUE FALSE 47228.72093 38828.10079 48907.95858 43837.65269 39879.14809 40531.92289 41403.92215 36938.95047 39634.48583 45018.5015 1.049095802 0.862492075 1.086396858 0.9737697 0.885839083 0.900339228 0.919709026 0.82052821 0.880404378 1 15.45823042 -6.204525262 5.042337979 0.89297299 0.991787113 0.299597787 0.068390252 0.256854023 14.03401704 0.019772076 0.025474569 6.24E-07 6.204525262 0.098814122 SPLPAGPSSCT(ph)SPR ddPTM_A459_MK2206_30min_R2 2 SPLPAGPSSCTSPR 14 0 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 SPLPAGPS(0.015)S(0.071)CT(0.863)S(0.051)PR;SPLPAGPS(0.002)S(0.031)CT(0.484)S(0.484)PR 118.52 0.0054888 23489500 57082 67351 59043 61231 70548 60318 68996 56097 71418 69694 TRUE FALSE 61452.24181 64006.44728 61011.46415 56228.23143 67777.93104 62613.44376 59936.74232 63429.07051 77629.80855 67419.89049 0.91148534 0.949370383 0.904947542 0.834000634 1.005310607 0.928708773 0.889006818 0.94080649 1.151437773 1 16.04088666 -8.138266334 6.240639135 1.073859143 0.918725728 0.577945372 0.053311923 0.153614087 7.015458282 0.035587739 0.013149777 7.27E-09 8.138266334 -0.155133415 SPLPAGPSSCTS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SPLPAGPSSCTSPR 14 0 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 SPLPAGPSSCT(0.033)S(0.967)PR 166.79 0.0002264 12102000 24508 24406 26593 25455 26959 26517 32328 23183 27151 26482 TRUE FALSE 26384.35132 23194.03353 27479.59735 23375.24507 25900.4542 27526.12302 28083.29477 26213.0977 29512.5449 25617.89451 1.029918806 0.905384067 1.072671969 0.912457699 1.011029778 1.074488109 1.096237427 1.023233884 1.152028512 1 14.64486429 -6.642959498 4.16220413 1.072260442 0.979388291 0.330927917 0.059928987 0.239646581 7.479137023 0.018956727 0.018837642 2.28E-07 6.642959498 -0.092872151 SPLPAGPSSCTSPRS(ph)PLPAPPRPFLYR ddPTM_A459_MK2206_30min_R1 1 SPLPAGPSSCTSPRSPLPAPPRPFLYR 27 2 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 SPLPAGPS(0.054)S(0.054)CT(0.18)S(0.18)PRS(0.524)PLPAPPRPFLY(0.008)R 60.635 0.0018037 21717000 2259.7 1760.9 2045.9 2315.5 2368.3 1714.4 1927.4 2114.6 1313.1 1055.5 TRUE FALSE 2067.500649 1646.26509 1907.030008 2493.840211 2273.965596 1811.467846 1798.826663 2096.112275 1449.601444 1186.263309 1.742868243 1.387773758 1.607594195 2.102265318 1.916914718 1.527036901 1.516380596 1.766987363 1.221989615 1 10.21220856 -8.411354119 3.355269811 1.004670765 1.692549982 0.592843372 0.1973838 0.173531822 3.538721968 0.207284083 0.055236112 3.88E-09 8.411354119 0.687879217 SPLT(ph)GYVR ddPTM_A459_MK2206_30min_R2 1 SPLTGYVR 8 0 H0YNS8;H0YKM5;Q9NP66 H0YNS8 HMG20A High mobility group protein 20A 1 S(0.486)PLT(0.514)GYVR 83.883 0.01584 9633300 52206 46604 42775 55176 44130 42673 43833 36009 37951 51258 TRUE FALSE 56202.9315 44289.71313 44201.09715 50667.9443 42397.23446 44296.95092 38077.67445 40715.49994 41251.90938 49585.45566 1.133455985 0.89319968 0.891412544 1.021830769 0.855033677 0.893345646 0.767920229 0.821117793 0.831935672 1 15.59762939 -6.28201956 20.71747404 0.849521994 0.971736309 0.322036974 0.085820783 108.2587604 108979.8951 0.02616792 0.029744574 5.22E-07 6.28201956 0.122214315 SPNELVDDLFK ddPTM_A459_MK2206_30min_R1 1 SPNELVDDLFK 11 0 Q9UNZ2-4;Q9UNZ2;Q9UNZ2-5;F2Z2K0 Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 0 134.38 0.022716 3090900 1272.5 1520.9 1307.7 1249.8 1041.2 872.2 1376.6 958.35 1031.8 1385.2 FALSE TRUE 1164.267193 1421.889134 1218.936967 1346.059813 999.7267992 921.5832103 1284.769526 949.971247 1139.059302 1556.809034 0.747854854 0.913335613 0.782971412 0.864627442 0.642164053 0.591969336 0.825258267 0.610204095 0.731662829 1 10.60437627 -6.250821937 24.84501816 0.711560371 0.830191074 0.112418087 0.11959412 1106.175612 2588471.153 0.033322837 0.042561736 5.61E-07 6.250821937 0.118630703 SPNPST(ph)PR ddPTM_A459_MK2206_30min_R2 3 SPNPSTPR 8 0 O76021;J3QSV6;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 SPNPS(0.004)T(0.996)PR;SPNPST(1)PR;SPNPS(0.004)T(0.996)PR 132.25 0.0078628 350205000 462805 480290 386553 473116 453490 515060 578440 456083 488950 519480 TRUE FALSE 498237.7066 456439.497 399440.4841 434460.9094 435683.704 534660.9692 502490.1332 515694.6141 531477.9872 502529.4101 0.991459796 0.908284148 0.794859915 0.864548225 0.866981504 1.063939659 0.999921841 1.026197877 1.057605737 1 18.93884851 -6.756445159 24.99289205 1.029319698 0.880338482 0.678643647 0.049593864 75.9514943 380088.7198 0.017577411 0.017054713 1.75E-07 6.756445159 -0.148981216 SPPLIGSESAYESFLSADDKAS(ph)GR ddPTM_A459_MK2206_30min_R1 1 SPPLIGSESAYESFLSADDKASGR 24 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SPPLIGSESAY(0.002)ES(0.006)FLS(0.191)ADDKAS(0.801)GR 52.577 0.01403 14136000 908.82 1147.2 1276.8 976.72 862.12 764.9 839.3 910.75 979.52 727.6 TRUE FALSE 831.5200866 1072.517071 1190.134373 1051.947144 827.7799348 808.207977 783.3118284 902.7874088 1081.344609 817.7405811 1.016850705 1.31156151 1.455393557 1.286406922 1.012276942 0.988342753 0.957897708 1.10400221 1.322356545 1 9.675499427 -6.254039272 24.28717183 1.060243556 1.284113819 0.336192506 0.139182427 451.6676082 1482371.444 0.043564232 0.055075788 5.57E-07 6.254039272 0.223870263 SPPLLES(ph)PDATR ddPTM_A459_MK2206_30min_R1 1 SPPLLESPDATR 12 0 Q15036-2;Q15036 Q15036-2 SNX17 Sorting nexin-17 1 SPPLLES(1)PDATR 93.228 0.020586 14013000 810.48 846.45 910.92 765.72 810.61 838.65 1022.9 779.51 817.41 835.85 TRUE FALSE 741.54442 791.3459512 849.0892884 824.6958871 778.3216872 886.1336383 954.6642074 772.6948263 902.3826946 939.4014083 0.789379719 0.842393831 0.903862056 0.877895093 0.828529402 0.94329605 1.016247367 0.822539566 0.960593295 1 9.875597946 -1.522878745 0.148038705 1.002968977 0.300350936 0.465520754 0.054808287 70.58322885 0.689669124 0.208651705 10.6142114 0.03 1.522878745 -0.70261804 SPPLLES(ph)PDATR ddPTM_A459_MK2206_30min_R2 3 SPPLLESPDATR 12 0 Q15036-2;Q15036 Q15036-2 SNX17 Sorting nexin-17 1 SPPLLES(0.998)PDAT(0.002)R;SPPLLES(1)PDATR;SPPLLES(1)PDATR 153 0.00048069 40680200 28816.6 35647.9 30177.4 37308.3 33120.7 40673.6 39811.9 25274.4 32472.9 36060.8 TRUE FALSE 31022.82105 33877.67712 31183.49945 34260.09255 31820.2149 42221.46235 34584.54971 28577.85086 35297.33414 34884.13905 0.889310211 0.971148437 0.89391627 0.982110881 0.91216856 1.21033408 0.991411875 0.819221905 1.011844784 1 15.09028361 -5.85617448 6.547325392 0.988688592 0.923650917 0.10713019 0.094189714 0.585182528 33.921733 0.028111701 0.042135114 1.39E-06 5.85617448 -0.065037675 SPPLLESPDAT(ph)R ddPTM_A459_MK2206_30min_R1 1 SPPLLESPDATR 12 0 Q15036-2;Q15036 Q15036-2 SNX17 Sorting nexin-17 1 SPPLLES(0.008)PDAT(0.992)R 116.9 0.011454 16065000 1249.8 1478 1450 1152.1 1530.2 1114 1335.7 1358.7 1400.9 1117.9 TRUE FALSE 1143.497947 1381.781931 1351.57804 1240.834942 1469.248894 1177.073717 1246.59789 1346.821029 1546.528568 1256.393892 0.910142874 1.099799944 1.075759799 0.987616185 1.169417412 0.936866794 0.992203081 1.071973557 1.230926526 1 10.29507312 -8.005058609 24.62320459 1.12745886 1.030323386 0.140360988 0.089243756 294.3502571 1432763.43 0.048565289 0.022266808 9.88E-09 8.005058609 -0.097135474 SPPLS(ph)PVGTTPVK ddPTM_A459_MK2206_30min_R2 1 SPPLSPVGTTPVK 13 0 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 1 S(0.004)PPLS(0.873)PVGT(0.122)T(0.001)PVK 121.92 0.002747 12280000 30445 43758 38358 42709 50856 56213 81246 68206 82116 97082 TRUE FALSE 32775.89261 41585.04135 39636.83658 39219.53808 48859.13791 58352.22511 70578.30261 77120.75839 89258.30125 93914.22229 0.348998179 0.442798123 0.42205361 0.41761021 0.520252809 0.621335339 0.751518789 0.821182953 0.950423685 1 16.51905603 -7.330272239 0.696695413 1.004425167 0.384352601 0.987605596 0.025027376 0.069807568 0.066607354 0.021714581 0.013635741 4.67E-08 7.330272239 -0.620072566 down SPPLSPVGTT(ph)PVK ddPTM_A459_MK2206_30min_R2 3 SPPLSPVGTTPVK 13 0 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 1 SPPLSPVGT(0.004)T(0.996)PVK;SPPLSPVGT(0.046)T(0.954)PVK;SPPLSPVGT(0.035)T(0.965)PVK 177.36 0.00024266 21673300 78035 110998 93417 121031 119647 104006 148096 120434 125004 139248 TRUE FALSE 84009.4196 105486.0007 96531.47616 111142.3801 114949.0576 107964.0212 128650.8173 136175.1373 135876.622 134704.3492 0.623657811 0.783092761 0.716617368 0.825083829 0.853343328 0.801488756 0.955060606 1.010918639 1.008702561 1 17.03943691 -6.611529815 0.482767893 1.037004235 0.660503341 0.855320005 0.048187537 0.42499299 0.206081866 0.044192632 0.070219339 2.45E-07 6.611529815 -0.376500894 SPPREGS(ph)QGELTPANSQSR ddPTM_A459_MK2206_30min_R1 2 SPPREGSQGELTPANSQSR 19 1 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 S(0.014)PPREGS(0.986)QGELTPANSQSR;SPPREGS(1)QGELTPANSQSR 77.543 0.0044215 11195700 1061.16 815.48 1000.04 1177.38 1230.88 1204.75 1008.91 1166.04 837.04 650.95 TRUE FALSE 970.9027696 762.3921038 932.1600711 1268.062012 1181.851443 1272.961904 941.6074548 1155.845435 924.0533034 731.5946004 1.327104887 1.042096406 1.274148375 1.733285088 1.615445825 1.739982639 1.287061788 1.579898805 1.263067419 1 9.514900617 -3.635525932 12.33564487 1.412727573 1.347144271 0 0.255211855 0 0 0.060612444 0 0.000231459 3.635525932 -0.065583302 SPPS(ph)PATDQR ddPTM_A459_MK2206_30min_R2 2 SPPSPATDQR 10 0 Q6F5E8-2;Q6F5E8 Q6F5E8-2 RLTPR Leucine-rich repeat-containing protein 16C 1 SPPS(0.999)PAT(0.001)DQR;S(0.339)PPS(0.473)PAT(0.188)DQR 84.821 0.037333 13410600 26337 27864 22214.7 34253 26792 33671 31199 25027.2 27296.3 25999 TRUE FALSE 28353.38097 26480.31428 22955.32701 31454.42033 25740.01146 34952.3735 27102.53382 28298.34097 29670.48283 25150.65476 1.127341663 1.052867789 0.912712899 1.250640217 1.023433056 1.389720221 1.077607485 1.125153251 1.179710155 1 14.61830834 -5.768953884 24.99978572 1.156446119 1.033163478 0.175384485 0.117029646 271.3756495 902834.1018 0.031512996 0.047773554 1.70E-06 5.768953884 -0.12328264 SPPS(ph)PGRR ddPTM_A459_MK2206_30min_R2 1 SPPSPGRR 8 1 Q03252 Q03252 LMNB2 Lamin-B2 1 SPPS(1)PGRR 63.426 0.046374 1928200 3068.3 2311.5 2600.2 1268.3 2678 3128.7 1276.2 3253 3785.3 2788.8 TRUE FALSE 3303.211407 2196.714271 2686.88937 1164.675833 2572.848264 3247.764871 1108.633407 3678.178269 4114.538552 2697.801684 1.224408535 0.814260842 0.995955109 0.431712916 0.953683245 1.203856047 0.410939549 1.363398314 1.525144927 1 11.39756858 -7.813995749 24.99999871 1.333205986 0.865534233 0.324664683 0.285358986 110.1796292 52408.61287 0.150679937 0.072384394 1.53E-08 7.813995749 -0.467671753 SPPS(ph)PVER ddPTM_A459_MK2206_30min_R1 2 SPPSPVER 8 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 S(0.007)PPS(0.993)PVER;S(0.001)PPS(0.999)PVER 95.483 0.021851 1496660000 2344.8 1918.31 1948.87 1600.79 2131.6 1880.07 1889.07 1957.81 1482.1 1751.17 TRUE FALSE 2145.362447 1793.42767 1816.586134 1724.083123 2046.693858 1986.517939 1763.053587 1940.693074 1636.169599 1968.11816 1.090057747 0.911239836 0.923006642 0.876005901 1.039924279 1.00934892 0.895806778 0.986065325 0.831337077 1 10.94260112 -4.754025367 24.83564019 0.942136315 1.090058032 0.334941598 0.06282886 292.4615154 979605.6031 0.015461604 0.15630634 1.76E-05 4.754025367 0.147921717 SPPS(ph)PVER ddPTM_A459_MK2206_30min_R2 1 SPPSPVER 8 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 S(0.002)PPS(0.998)PVER 80.737 0.045424 667940000 22252 21519 21112 22199 15313 39559 37286 33276 18630 36645 TRUE FALSE 23955.63023 20450.39775 21815.86354 20385.27069 14711.73468 41064.44547 32390.30341 37625.28745 20250.40372 35449.27665 0.675772046 0.576891821 0.615410683 0.575054631 0.415008036 1.158400096 0.913708444 1.061383786 0.571250125 1 15.11346857 -6.756139841 24.99999018 0.943082478 0.574542707 0.586774476 0.154949532 93.28531967 440063.0132 0.050493587 0.049079242 1.75E-07 6.756139841 -0.368539771 SPPS(ph)TGSTYGSSQKEESAASGGAAYTK ddPTM_A459_MK2206_30min_R2 1 SPPSTGSTYGSSQKEESAASGGAAYTK 27 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.378)PPS(0.442)T(0.129)GS(0.026)T(0.006)Y(0.006)GS(0.006)S(0.006)QKEESAASGGAAYTK 58.998 0.0033758 83870000 29367 31008 32220 34948 34057 23131 27243 30043 22919 38566 TRUE FALSE 31615.3601 29468.18781 33294.19872 32092.63661 32719.75106 24011.26641 23665.96138 33969.72325 24912.45319 37307.59458 0.847424243 0.789871021 0.892424159 0.860217255 0.877026553 0.643602641 0.634347018 0.91053105 0.667758227 1 15.18718172 SPPSSS(ph)EIFTPAHEENVR ddPTM_A459_MK2206_30min_R2 1 SPPSSSEIFTPAHEENVR 18 0 I3L2L5;I3L3A7;I3L317;I3L4Q0;C9JLW8 I3L2L5 FAM195B Protein FAM195B 1 S(0.081)PPS(0.279)S(0.279)S(0.361)EIFTPAHEENVR 89.311 0.0040826 8270400 9447.3 9068.7 9388.8 10599 9483.6 10684 8676.3 7254.5 8117.5 11087 TRUE FALSE 10170.59255 8618.361545 9701.817906 9733.027795 9111.226213 11090.58711 7537.091388 8202.688058 8823.545477 10725.2321 0.948286476 0.803559444 0.90457883 0.90748878 0.849513197 1.034064998 0.702743896 0.764802848 0.822690399 1 13.38872125 -7.273905774 24.98826274 0.802959537 0.900346161 0.1583991 0.091056557 1229.100044 2463659.221 0.036215558 0.024615714 5.32E-08 7.273905774 0.097386624 SPPST(ph)GSTYGSSQK ddPTM_A459_MK2206_30min_R1 2 SPPSTGSTYGSSQK 14 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.184)PPS(0.068)T(0.492)GS(0.031)T(0.226)YGSSQK;S(0.172)PPS(0.258)T(0.37)GS(0.158)T(0.043)YGSSQK 121.18 0.004002 23367000 1001.7 1352.32 1216.9 728.58 998.91 991.92 1491.29 833.07 1231.26 2086.47 TRUE FALSE 916.5001549 1264.283722 1134.300218 784.6953578 959.1212995 1048.081653 1391.808765 825.7865568 1359.253883 2344.957656 0.39083868 0.539149916 0.483718849 0.334630929 0.409014336 0.446951206 0.593532579 0.352154144 0.579649649 1 11.19534616 -8.622064115 5.105361785 0.99998245 0.449115137 0.828855742 0.075992181 0.325694675 16.34151549 0.073485228 0.01910229 2.39E-09 8.622064115 -0.550867314 down SPPTTMLLPAS(ph)PAK ddPTM_A459_MK2206_30min_R2 2 SPPTTMLLPASPAK 14 0 Q9UGU5 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 SPPTTMLLPAS(1)PAK;SPPTTMLLPAS(1)PAK 117.13 0.0025496 10229800 66226 54709 51881 59549 47065 44026 81462 47311 41921 65276 TRUE FALSE 71296.31348 51992.23061 53610.68665 54683.65621 45216.99162 45701.44028 70765.94155 53494.71014 45567.2128 63146.04947 1.129070054 0.82336474 0.848995101 0.865986973 0.71607 0.723741876 1.120670923 0.847158462 0.721616209 1 15.94640486 -4.758427841 24.97182189 0.84766987 1.129070441 0.318941815 0.121337764 102.2782087 847943.7564 0.030481212 0.208766352 1.74E-05 4.758427841 0.281400571 SPPVLGSAAAS(ph)PVHLK ddPTM_A459_MK2206_30min_R2 1 SPPVLGSAAASPVHLK 16 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 SPPVLGS(0.018)AAAS(0.982)PVHLK 82.367 0.013329 4288600 33906 39830 28976 44861 34926 41269 36303 31292 33141 43737 TRUE FALSE 36501.86943 37852.10012 29942.04538 41195.7128 33554.62975 42839.52071 31536.37249 35381.97184 36023.54427 42309.86527 0.862727149 0.894640053 0.707684725 0.973666839 0.793068698 1.012518486 0.745366885 0.836258202 0.851421862 1 15.36870647 -11.41925857 2.104083612 1.089091755 0.852801826 0.198645411 0.088550322 5504182.757 2442753.885 2427841.077 0.021920359 3.81E-12 11.41925857 -0.236289929 SPQDPGDPVQYNRT(ph)TDEELSELEDR ddPTM_A459_MK2206_30min_R1 2 SPQDPGDPVQYNRTTDEELSELEDR 25 1 H7C3K9;H7C052;Q9BV36-5;Q9BV36;Q9BV36-4;Q9BV36-2;H7C2D8 H7C3K9;Q9BV36;Q9BV36-2 MLPH Melanophilin 1 SPQDPGDPVQY(0.286)NRT(0.356)T(0.356)DEELS(0.002)ELEDR;SPQDPGDPVQY(0.001)NRT(0.436)T(0.436)DEELS(0.127)ELEDR 80.41 0.00027019 8906000 1451.11 1527.26 1883.36 1798.95 2207.37 1784.99 1304.7 2227.8 925.53 495.25 TRUE FALSE 1327.685474 1427.835096 1755.522771 1937.505441 2119.445779 1886.054591 1217.665844 2208.322579 1021.742156 556.6053089 2.385326645 2.565255978 3.153981362 3.480932376 3.807807336 3.388495512 2.187664803 3.96748386 1.835667284 1 9.120510859 -8.48648265 5.293697112 1.003230699 3.108659493 0.613680982 0.5587268 0.1087952 8.092311727 0.551953577 0.1434126 3.26E-09 8.48648265 2.105428794 SPQDPGDPVQYNRT(ph)TDEELSELEDR ddPTM_A459_MK2206_30min_R2 1 SPQDPGDPVQYNRTTDEELSELEDR 25 1 H7C3K9;H7C052;Q9BV36-5;Q9BV36;Q9BV36-4;Q9BV36-2;H7C2D8 H7C3K9;Q9BV36;Q9BV36-2 MLPH Melanophilin 1 SPQDPGDPVQY(0.027)NRT(0.467)T(0.467)DEELS(0.039)ELEDR 73.389 0.00068455 2840000 1481.8 7601.5 5856.7 7401.2 8017.1 8136.4 6385.1 5870.1 10877 4028.1 TRUE FALSE 1595.247747 7224.020564 6051.959455 6796.498285 7702.308371 8446.036403 5546.7287 6637.342225 11823.0618 3896.663427 0.409388128 1.853899034 1.553113213 1.744184072 1.976641944 2.167504729 1.42345594 1.703339883 3.034150119 1 11.92802361 -4.761145001 24.91897137 1.841784656 0.409386785 0.416033415 0.504161343 6.449328968 544990.6101 0.119700409 0.678491283 1.73E-05 4.761145001 -1.432397871 SPQEEDFRCPS(ph)DEDFR ddPTM_A459_MK2206_30min_R1 1 SPQEEDFRCPSDEDFR 16 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 SPQEEDFRCPS(1)DEDFR 64.331 0.032244 16572000 2551.9 2746.9 2755.9 1950.8 1923.4 2429.3 2909.7 1882.2 2567.9 2420.4 TRUE FALSE 2334.847504 2568.076311 2568.837186 2101.050954 1846.786905 2566.844867 2715.599222 1865.744124 2834.842394 2720.257425 0.858318585 0.944056355 0.944336063 0.772372105 0.678901522 0.943603662 0.998287587 0.685870428 1.04212284 1 11.40952747 SPQGPSPVLAEDS(ph)EGEG ddPTM_A459_MK2206_30min_R1 1 SPQGPSPVLAEDSEGEG 17 0 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 1 SPQGPSPVLAEDS(1)EGEG 81.317 0.039466 0 545.26 611.51 727.45 558.28 605.52 509.8 577.02 500.38 487.8 330.62 TRUE FALSE 498.8827737 571.7005879 678.0727208 601.2788223 581.4008562 538.6644354 538.5280486 496.0052304 538.5085556 371.5797017 1.34259964 1.538567864 1.824837896 1.618169183 1.564673349 1.449660552 1.449293506 1.334855559 1.449241046 1 8.537527883 -8.908013517 0.435385815 0.965422651 1.596331891 0.637525444 0.12287836 1.260121204 0.487333449 0.239305847 0.086623699 1.24E-09 8.908013517 0.63090924 SPQGPSPVLAEDS(ph)EGEG ddPTM_A459_MK2206_30min_R2 1 SPQGPSPVLAEDSEGEG 17 0 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 1 SPQGPSPVLAEDS(1)EGEG 80.638 0.041091 0 5305.4 9812.9 7538.4 9599 10888 8516.4 8773 6783 8251.1 8698.5 TRUE FALSE 5711.585503 9325.605655 7789.726494 8814.730994 10460.48241 8840.49757 7621.094562 7669.56139 8968.765763 8414.668657 0.678765348 1.108255837 0.925731816 1.047543445 1.243124695 1.050605547 0.905691581 0.911451384 1.065848951 1 13.03869075 -4.753153377 24.98142824 1.026840884 0.678764697 0.537352984 0.097394801 265.6114185 800728.0943 0.026079943 0.288895826 1.77E-05 4.753153377 -0.348076187 SPQNDDHS(ph)DTDSEENRDNQQFLTTVK ddPTM_A459_MK2206_30min_R1 1 SPQNDDHSDTDSEENRDNQQFLTTVK 26 1 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 SPQNDDHS(0.776)DT(0.195)DS(0.029)EENRDNQQFLTTVK 65.677 0.00087887 8606800 778.8 516.39 524.36 499.9 535.58 455.88 543.31 576.57 496.7 387.19 TRUE FALSE 712.5589704 482.7729171 488.7679042 538.4023846 514.2467145 481.6915316 507.0667812 571.5291093 548.3337425 435.1580203 1.637471762 1.109419784 1.123196359 1.237257179 1.181747068 1.106934744 1.165247468 1.313382915 1.260079596 1 8.765395576 -4.756425462 24.99977699 1.175611271 1.637472473 0.732282125 0.085291071 83.17074698 414648.8678 0.021422946 0.173598324 1.75E-05 4.756425462 0.461861202 SPQPPVEEEDEHFDDT(ph)VVCLDTYNCDLHFK ddPTM_A459_MK2206_30min_R1 1 SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 30 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.226)PQPPVEEEDEHFDDT(0.774)VVCLDTYNCDLHFK 108.49 4.92E-11 23446000 3817.3 3718.4 4266.6 2997.8 3332.2 2961.9 3824.4 3709.6 3765.4 4659.4 TRUE FALSE 3492.61859 3476.331484 3976.995079 3228.691075 3199.471418 3129.600218 3569.281254 3677.167358 4156.826805 5236.641649 0.666957723 0.663847503 0.759455267 0.616557575 0.610977728 0.597634978 0.681597385 0.70219954 0.793796308 1 12.35442617 -8.622764721 1.315574951 0.999247835 0.654861339 0.857506192 0.042969468 0.21377145 0.784601733 0.044698877 0.013513432 2.38E-09 8.622764721 -0.344386496 SPQPVCS(ph)PAGSEGTPK ddPTM_A459_MK2206_30min_R1 1 SPQPVCSPAGSEGTPK 16 0 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 SPQPVCS(0.816)PAGS(0.179)EGT(0.005)PK 190.8 1.03E-06 6870000 2127.1 1769.3 1722.4 1511.7 1398.9 1505.4 1444.8 1593.6 1715.5 1365.6 TRUE FALSE 1946.178975 1654.118248 1605.488287 1628.131396 1343.178851 1590.634447 1348.420028 1579.667323 1893.832364 1534.780838 1.268050087 1.077755343 1.046070063 1.06082338 0.875160034 1.036391912 0.87857497 1.029246186 1.233943191 1 10.58381694 -4.112971141 1.147895839 1.008647173 2.036829115 0.381556476 0.094811303 6.689638851 2.473470664 0.029192477 12.01932778 7.71E-05 4.112971141 1.028181942 SPQPVCS(ph)PAGSEGTPK ddPTM_A459_MK2206_30min_R2 1 SPQPVCSPAGSEGTPK 16 0 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 S(0.02)PQPVCS(0.979)PAGS(0.001)EGTPK 172.99 5.34E-06 8911100 34593 32069 30252 32738 34324 25584 37130 32163 26073 31839 TRUE FALSE 37241.46668 30476.50009 31260.58658 30063.20068 32976.2673 26557.61705 32254.7864 36366.81453 28340.78241 30800.09604 1.209134758 0.989493671 1.014950945 0.976074901 1.070654691 0.862257605 1.047230059 1.18073705 0.920152404 1 14.91064723 -4.757744181 24.97524831 1.010517469 1.209135044 0.357952689 0.081144568 121.120772 818514.6587 0.019958877 0.144032494 1.75E-05 4.757744181 0.198617576 SPQQTVPYVVPLS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SPQQTVPYVVPLSPK 15 0 Q9UQR0;H0Y6S1;B4DRC2 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 1 SPQQT(0.007)VPY(0.302)VVPLS(0.691)PK;SPQQTVPYVVPLS(1)PK 126.14 0.0011686 42130000 341470 320680 318660 261050 292560 201010 338370 232320 240280 333830 TRUE FALSE 367613.2057 304755.4975 329283.9654 239721.3799 281072.6244 208659.5764 293941.6125 262685.0217 261179.1201 322937.1544 1.138342865 0.943699086 1.019653393 0.742315886 0.870363229 0.646130597 0.910213051 0.813424588 0.808761446 1 18.30089391 -5.747027564 24.53530257 0.81723992 1.024878656 0.471619062 0.099668126 156.6664065 266712.8127 0.025475656 0.043853166 1.79E-06 5.747027564 0.207638736 SPQS(ph)PGGNICHLGAPK ddPTM_A459_MK2206_30min_R2 3 SPQSPGGNICHLGAPK 16 0 Q9H609 Q9H609 ZNF576 Zinc finger protein 576 1 S(0.083)PQS(0.917)PGGNICHLGAPK;S(0.082)PQS(0.918)PGGNICHLGAPK;S(0.18)PQS(0.82)PGGNICHLGAPK 103.67 0.0056864 28841000 179417 187615 158508 179979 198736 173448 214577 153294 161451 200902 TRUE FALSE 193153.3035 178298.3119 163792.5776 165274.14 190932.6261 180048.6852 186402.7821 173330.0521 175493.7161 194346.5842 0.993860038 0.91742447 0.842785986 0.850409286 0.98243366 0.926430922 0.95912559 0.891860553 0.902993571 1 17.56827223 -6.264536687 24.99916133 0.938297496 0.898117844 0.144451739 0.049608082 620.7833285 5010496.287 0.01592811 0.018831856 5.44E-07 6.264536687 -0.040179652 SPQTLAPVGEDAMKTPS(ph)PAAEDAREPEAK ddPTM_A459_MK2206_30min_R2 1 SPQTLAPVGEDAMKTPSPAAEDAREPEAK 29 2 Q92797 Q92797 SYMPK Symplekin 1 S(0.001)PQT(0.001)LAPVGEDAMKT(0.019)PS(0.979)PAAEDAREPEAK 46.695 0.016044 5330000 8708.8 18623 11618 16061 20086 12179 20051 13620 16739 14960 TRUE FALSE 9375.552424 17698.2089 12005.33832 14748.76492 19297.32272 12642.48038 17418.27961 15400.18076 18194.92796 14471.85643 0.647847253 1.222939779 0.829564499 1.019134276 1.33343796 0.873590783 1.203596768 1.064146873 1.257262885 1 13.82096238 -4.750094078 24.89557841 1.085452891 0.647846245 0.415644143 0.156969642 472.3242905 1036376.026 0.037456875 0.568194491 1.78E-05 4.750094078 -0.437606646 SPQTPSQMVPLPSANPPGPLKS(ph)PQVLGSSLSVR ddPTM_A459_MK2206_30min_R2 2 SPQTPSQMVPLPSANPPGPLKSPQVLGSSLSVR 33 1 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 SPQTPSQMVPLPS(0.039)ANPPGPLKS(0.839)PQVLGS(0.031)S(0.039)LS(0.051)VR;SPQTPSQMVPLPSANPPGPLKS(0.878)PQVLGS(0.045)S(0.038)LS(0.038)VR 86.544 1.41E-08 20547600 57225 69573 56795 62827 48825 50526 63251 50417 47317 58576 TRUE FALSE 61606.19 66118.10599 58688.51695 57693.83313 46907.88517 52448.80234 54946.06772 57006.67501 51432.54713 56664.66992 1.087206368 1.166831221 1.035716206 1.018162344 0.827815378 0.925599715 0.969670657 1.006035597 0.907665168 1 15.79016188 -5.687528532 2.180514615 0.941295369 1.123649282 0.630075831 0.054875023 0.193512126 1.866039413 0.016612281 0.034091775 2.05E-06 5.687528532 0.182353913 SPRPAS(ph)PASNVVVLPSGSTVYVK ddPTM_A459_MK2206_30min_R1 2 SPRPASPASNVVVLPSGSTVYVK 23 1 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4;Q7Z589-2 Q7Z589 EMSY;C11orf30 Protein EMSY 1 S(0.262)PRPAS(0.712)PAS(0.026)NVVVLPSGSTVYVK;S(0.281)PRPAS(0.658)PAS(0.061)NVVVLPSGSTVYVK 87.671 0.00012535 24077000 7328.1 7282.9 7704.2 6554.5 7881.8 6331.4 8086.9 7252.9 6594.8 5379.7 TRUE FALSE 6704.806614 6808.781886 7181.260369 7059.328726 7567.851216 6689.878397 7547.437656 7189.48866 7280.35306 6046.177851 1.108933078 1.126129938 1.187735549 1.167568818 1.251675257 1.106464044 1.248298982 1.189096457 1.20412486 1 12.5618077 -5.165846758 4.012694713 1.179604862 1.112696999 0.068186979 0.069630777 0.475079678 13.54200286 0.016552019 0.049924091 6.83E-06 5.165846758 -0.066907863 SPRPAS(ph)PASNVVVLPSGSTVYVK ddPTM_A459_MK2206_30min_R2 2 SPRPASPASNVVVLPSGSTVYVK 23 1 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4;Q7Z589-2 Q7Z589 EMSY;C11orf30 Protein EMSY 1 S(0.143)PRPAS(0.839)PAS(0.018)NVVVLPSGSTVYVK;S(0.05)PRPAS(0.94)PAS(0.01)NVVVLPSGSTVYVK 110.55 8.56E-06 17529800 95193 133429 109944 141936 142061 145971 140103 108676 136420 137213 TRUE FALSE 102481.0493 126803.1099 113609.4781 130339.3748 136482.9713 151526.0287 121707.3078 122880.3263 148285.565 132735.751 0.772068177 0.955304874 0.855907148 0.981946263 1.028230678 1.141561542 0.916914297 0.925751543 1.117148649 1 17.01819747 -4.059716394 0.616700956 1.018226131 0.371081374 0.464729914 0.077670197 7.686488905 1.151180984 0.037149857 4.302771505 8.72E-05 4.059716394 -0.647144757 SPRPGSSAPEHS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SPRPGSSAPEHSPR 14 1 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 SPRPGSSAPEHS(1)PR 70.167 0.032119 1494400 670.07 3173.3 973.47 2236.6 2798.6 2130.7 2319.9 2370.6 2663.9 2492.1 TRUE FALSE 721.3710744 3015.718536 1005.925004 2053.862625 2688.712902 2211.785282 2015.294343 2680.445559 2895.601207 2410.782981 0.299226882 1.25092908 0.417260704 0.851948368 1.115286164 0.917455158 0.835950129 1.111856845 1.201104052 1 11.23528607 -4.181302463 0.327520516 1.09105392 6.95E-13 0.296492949 0.253815085 15.0716126 0.963302201 0.248299198 7.031570253 6.59E-05 4.181302463 -1.09105392 SPRPT(ph)SAPAITQGQVAEGGVLDASAK ddPTM_A459_MK2206_30min_R1 1 SPRPTSAPAITQGQVAEGGVLDASAK 26 1 P11171;Q4VB86;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y5Z6;A0A2R8Y5G2;A0A2R8Y570;A0A2R8YCW8;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y4N6;A0A2R8YD30;A0A3B3IUD6;A0A2R8Y7Y3;A0A2R8Y7N0;A0A2R8Y420;A0A3B3ITP0;P11171-3;P11171-4;P11171-7;P11171-6;P11171-5;P11171-2;A0A2R8Y6D0;A0A1B0GWG0;A0A2R8Y5C8 P11171 EPB41 Protein 4.1 1 S(0.268)PRPT(0.361)S(0.361)APAIT(0.01)QGQVAEGGVLDASAK 65.349 0.002287 6679500 2198.7 1923.8 1938.1 2297 2103.9 2400.8 2290.9 2064.4 2139.4 2235.9 TRUE FALSE 2011.689019 1798.56027 1806.547172 2473.915338 2020.097208 2536.731221 2138.078241 2046.351168 2361.798286 2512.900172 0.800544742 0.715730887 0.718909248 0.984486119 0.803890752 1.009483484 0.850840899 0.814338425 0.939869523 1 11.29513764 -5.748461957 24.98138827 0.903636717 0.7421285 0.525837167 0.073279028 181.7274803 349820.2803 0.019121672 0.032856881 1.78E-06 5.748461957 -0.161508217 SPRPT(ph)SAPAITQGQVAEGGVLDASAK ddPTM_A459_MK2206_30min_R2 2 SPRPTSAPAITQGQVAEGGVLDASAK 26 1 P11171;Q4VB86;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y5Z6;A0A2R8Y5G2;A0A2R8Y570;A0A2R8YCW8;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y4N6;A0A2R8YD30;A0A3B3IUD6;A0A2R8Y7Y3;A0A2R8Y7N0;A0A2R8Y420;A0A3B3ITP0;P11171-3;P11171-4;P11171-7;P11171-6;P11171-5;P11171-2;A0A2R8Y6D0;A0A1B0GWG0;A0A2R8Y5C8 P11171 EPB41 Protein 4.1 1 S(0.038)PRPT(0.481)S(0.481)APAITQGQVAEGGVLDASAK;S(0.003)PRPT(0.498)S(0.498)APAITQGQVAEGGVLDASAK 101.49 1.95E-06 22985200 61272 74660 78325 72134 76479 62793 78492 56498 50129 72736 TRUE FALSE 65963.03143 70952.49297 80936.31641 66240.42145 73476.05018 65182.63162 68185.90611 63882.48259 54489.12981 70362.63028 0.937472507 1.008383181 1.150274174 0.941414799 1.044248202 0.926381395 0.969064201 0.907903561 0.77440439 1 16.10252179 -7.205460562 1.209532549 0.886212827 1.020544125 0.283430448 0.078553326 0.570652323 1.642907393 0.049617295 0.029791628 6.23E-08 7.205460562 0.134331298 SPS(ph)AGDVHILTGFAK ddPTM_A459_MK2206_30min_R1 1 SPSAGDVHILTGFAK 15 0 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 S(0.454)PS(0.546)AGDVHILTGFAK 84.829 0.01412 25367000 7631 8002.6 7080 5768.3 7501.6 7756.1 8450.4 6764.4 8601.3 9129.7 TRUE FALSE 6981.943378 7481.629285 6599.429326 6212.575465 7202.795387 8195.243679 7886.689235 6705.259564 9495.435915 10260.75616 0.680451155 0.729149896 0.643171831 0.605469555 0.701975105 0.79869783 0.768626514 0.653485909 0.92541288 1 13.32484943 -8.561079209 0.612116159 1.010705045 0.676353404 0.704773485 0.065467939 0.529197276 0.458703677 0.071069554 0.030001032 2.75E-09 8.561079209 -0.334351641 SPS(ph)AGDVHILTGFAK ddPTM_A459_MK2206_30min_R2 1 SPSAGDVHILTGFAK 15 0 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 S(0.056)PS(0.944)AGDVHILTGFAK 82.529 0.025211 8492400 29062 25093 28364 25984 27495 23350 32344 21607 25850 31633 TRUE FALSE 31287.00906 23846.91811 29309.6416 23861.02408 26415.40815 24238.60061 28097.19395 24431.10909 28098.38627 30600.8178 1.022423952 0.779290222 0.957805827 0.77975119 0.863225562 0.792089962 0.918184414 0.798380921 0.918223377 1 14.90128259 -8.530140714 20.963867 1.000000005 0.86063772 0.226496035 0.077890625 124.8448839 360406.897 0.068179147 0.01760378 2.95E-09 8.530140714 -0.139362285 SPS(ph)APAATSSASSSTSSYKR ddPTM_A459_MK2206_30min_R2 2 SPSAPAATSSASSSTSSYKR 20 1 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 S(0.354)PS(0.646)APAATSSASSSTSSYKR;S(0.188)PS(0.812)APAATSSASSSTSSYKR 115.53 0.00013891 21787500 32941.4 43849 34863.8 50382 56392 49434 48115 35794 40565 42537 TRUE FALSE 35463.41891 41671.52242 36026.14169 46265.62944 54177.76673 51315.24551 41797.4427 40472.3987 44093.27038 41149.02117 0.861828979 1.012697781 0.87550422 1.124343377 1.316623462 1.247058716 1.015757885 0.983556778 1.071550893 1 15.32857049 -5.769689987 24.99153938 1.118319618 0.926279068 0.398652506 0.10723868 195.7227928 592856.2373 0.033557253 0.050733801 1.70E-06 5.769689987 -0.192040551 SPS(ph)ASSLSSMSSVASSVSSR ddPTM_A459_MK2206_30min_R2 1 SPSASSLSSMSSVASSVSSR 20 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H0N7 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 S(0.292)PS(0.674)AS(0.017)S(0.014)LS(0.002)S(0.001)MSSVASSVSSR 57.171 0.039321 5652900 2947.8 1512.3 2539.8 3629.9 3651 4022.5 4669.7 3281.3 3551.7 3281.2 TRUE FALSE 3173.485834 1437.201381 2624.475664 3333.325559 3507.643395 4175.579056 4056.562781 3710.177176 3860.620446 3174.134713 0.999795573 0.452785251 0.826831846 1.050152517 1.10507074 1.315501525 1.278005865 1.168878297 1.216274921 1 11.63214764 -5.857220193 2.087931052 1.200504258 0.709528391 0.615556038 0.149070264 0.184149712 1.637051286 0.044342737 0.078758579 1.39E-06 5.857220193 -0.490975867 SPS(ph)ASSLSSMSSVASSVSSRPSR ddPTM_A459_MK2206_30min_R1 1 SPSASSLSSMSSVASSVSSRPSR 23 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H0N7 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 S(0.248)PS(0.366)AS(0.101)S(0.222)LS(0.061)S(0.001)MSSVASSVSSRPSR 194.15 1.31E-26 0 861.86 695.66 756.96 567.66 759.42 714.26 695.25 656.02 525.64 505.72 TRUE FALSE 788.5542812 650.3724076 705.5796642 611.3812716 729.1706933 754.7007839 648.8711411 650.2844863 580.282159 568.3724116 1.387390143 1.144271598 1.241403787 1.07567021 1.282910075 1.327827967 1.141630255 1.144116908 1.020954127 1 9.150692719 -8.02706396 1.546730433 0.999730443 1.230462571 0.516023823 0.085692599 0.340404257 1.457641796 0.076404797 0.025154751 9.40E-09 8.02706396 0.230732129 SPS(ph)ASSLSSMSSVASSVSSRPSR ddPTM_A459_MK2206_30min_R2 1 SPSASSLSSMSSVASSVSSRPSR 23 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H0N7 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 S(0.216)PS(0.744)AS(0.01)S(0.027)LS(0.002)S(0.001)MSSVASSVSSRPSR 46.356 0.03912 9821000 0 1436.2 1641.5 0 991.87 1779.6 0 0 0 2134.5 TRUE FALSE 0 1364.880396 1696.226791 0 952.9242001 1847.323925 0 0 0 2064.85144 0 0.661006584 0.821476431 0 0.461497705 0.89465222 0 0 0 1 11.01182227 -7.301407683 24.99491982 0.166666693 0.475449514 0.055491695 0.394965082 1163.751227 727769.0451 0.160902563 0.108482078 5.00E-08 7.301407683 0.308782821 SPS(ph)ASSVGSR ddPTM_A459_MK2206_30min_R1 1 SPSASSVGSR 10 0 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 S(0.149)PS(0.845)AS(0.005)S(0.001)VGSR 112.94 0.0079334 3284900 1283.1 1275.1 1346.5 1375.8 1563.3 1355.7 1652.9 1674 1131.6 1281.1 TRUE FALSE 1173.965607 1192.090758 1255.103332 1481.764354 1501.030451 1432.458562 1542.638057 1659.364394 1249.233869 1439.81234 0.815360151 0.827948702 0.871713137 1.029137141 1.042518118 0.994892545 1.071416055 1.152486577 0.86763659 1 10.49166507 -5.686259939 3.358623261 1.031816262 0.826077359 0.611136987 0.067744997 0.148228857 3.321631717 0.018710576 0.034000035 2.06E-06 5.686259939 -0.205738902 SPS(ph)ASSVGSR ddPTM_A459_MK2206_30min_R2 1 SPSASSVGSR 10 0 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 S(0.17)PS(0.816)AS(0.011)S(0.003)VGSR 91.123 0.028474 3619900 8331.5 7894.6 7671.2 6658.7 8959.9 6008.6 8486.2 5578.2 4362.5 9032.2 TRUE FALSE 8969.366046 7502.565644 7926.953979 6114.66291 8608.089306 6237.261483 7371.951746 6307.289893 4741.942364 8737.480054 1.02653923 0.858664695 0.907235717 0.699819956 0.985191297 0.713851299 0.843716003 0.721866013 0.542712811 1 13.09300154 -1.522878745 0.460764683 0.76514 6.761911437 0.218296673 0.132104639 134.3269965 1.57850325 0.077512871 762.9381214 0.03 1.522878745 5.996771436 SPS(ph)DSGYSYETIGK ddPTM_A459_MK2206_30min_R2 1 SPSDSGYSYETIGK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.245)PS(0.755)DSGYSYETIGK 134.06 0.00067574 156810000 86605 53604 70808 66153 56134 54717 79400 53839 49097 73711 TRUE FALSE 93235.54539 50942.10331 73168.70338 60748.08829 53929.89711 56799.29378 68974.68462 60875.94216 53367.36831 71305.81611 1.307544749 0.714417226 1.02612532 0.851937354 0.756318349 0.796559059 0.967307976 0.853730389 0.748429388 1 16.12173214 -4.750147214 24.9936947 0.85613918 1.307545734 0.630040614 0.103524758 317.7936087 703348.7604 0.024876455 0.376562071 1.78E-05 4.750147214 0.451406554 SPS(ph)EARQDVDLCLVSSCEYK ddPTM_A459_MK2206_30min_R1 1 SPSEARQDVDLCLVSSCEYK 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.391)PS(0.609)EARQDVDLCLVSSCEYK 121.26 0.00013587 9375400 1643.8 1445.4 1337.9 1997.5 2481.3 1328.3 922.11 2169 518.35 204.25 TRUE FALSE 1503.986178 1351.304197 1247.087076 2151.347796 2382.464567 1403.507198 860.5977244 2150.036662 572.2343374 229.554032 6.551774172 5.886649803 5.432651584 9.371858021 10.37866574 6.114060319 3.748998512 9.366146362 2.492808915 1 7.842689962 -8.417548002 5.104733943 1.052143248 7.036626471 0.551650807 1.950801601 0.164328629 5.939821641 1.981837149 0.515846373 3.82E-09 8.417548002 5.984483223 SPS(ph)FASEWDEIEK ddPTM_A459_MK2206_30min_R1 3 SPSFASEWDEIEK 13 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.01)PS(0.99)FASEWDEIEK;S(0.015)PS(0.981)FAS(0.004)EWDEIEK;S(0.092)PS(0.9)FAS(0.007)EWDEIEK 223.06 6.37E-09 70764100 6062.9 6179.3 6234.6 5174.76 5738.35 5188.6 5721.06 5460.7 5357.11 5408.79 TRUE FALSE 5547.218517 5777.026447 5811.412723 5573.320912 5509.779368 5482.374048 5339.418526 5412.957676 5914.000755 6078.871739 0.912540806 0.950345178 0.956001865 0.91683476 0.906381908 0.901873618 0.878356832 0.890454332 0.972878029 1 12.56958786 -8.439887202 4.522495328 0.999343817 0.915162806 0.626403107 0.022760209 0.148234976 5.083891007 0.025462884 0.006650965 3.63E-09 8.439887202 -0.084181011 SPS(ph)FGAGEGLLR ddPTM_A459_MK2206_30min_R1 1 SPSFGAGEGLLR 12 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 S(0.404)PS(0.596)FGAGEGLLR 96.23 0.017311 17438000 959.84 1038.2 852.72 803.62 774.19 616.24 760.97 1004.6 828.22 864.25 TRUE FALSE 878.2005677 970.6129913 794.8397422 865.5149516 743.3523729 651.1309763 710.2070798 995.8168881 914.3164328 971.3198148 0.904131219 0.999272306 0.818308996 0.891071034 0.765301358 0.670356937 0.731177383 1.025220399 0.941313478 1 9.923802582 -7.774361913 24.99998832 0.987450248 0.8262757 0.408275215 0.090020086 277.3973446 536646.097 0.055627626 0.026988894 1.68E-08 7.774361913 -0.161174548 SPS(ph)FGGASEASAR ddPTM_A459_MK2206_30min_R2 1 SPSFGGASEASAR 13 0 H7C2F7;Q8WVT3 H7C2F7 TRAPPC12 Trafficking protein particle complex subunit 12 1 S(0.15)PS(0.85)FGGASEASAR 89.747 0.022048 5596300 5278.9 10284 8289.1 12111 11611 10246 11843 8987.6 7242.5 12732 TRUE FALSE 5683.056643 9773.311514 8565.454457 11121.49256 11155.0938 10635.91871 10287.99987 10162.31018 7872.439559 12316.55588 0.461416056 0.793510102 0.695442341 0.902970982 0.905699118 0.863546499 0.835298437 0.825093498 0.639175402 1 13.58831127 -4.433780867 1.400250265 0.83817566 2.38E-15 0.562139954 0.097825973 2.211977132 2.077324446 0.027548997 3.306898727 3.68E-05 4.433780867 -0.83817566 SPS(ph)GAGEGASCSDGPR ddPTM_A459_MK2206_30min_R1 1 SPSGAGEGASCSDGPR 16 0 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 S(0.013)PS(0.986)GAGEGAS(0.001)CSDGPR 85.473 0.016277 2495700 453.65 268.46 329.9 346 689.76 804.01 559.35 606.24 371.18 327.27 TRUE FALSE 415.0646853 250.9832052 307.5073072 372.64898 662.2853986 849.5323514 522.0367821 600.9397076 409.7654893 367.8146784 1.12846145 0.682363212 0.836038704 1.013143308 1.800595348 2.309674957 1.419292956 1.633811109 1.114054206 1 8.522835244 -6.147704226 4.878031329 1.607778208 0.873152245 0.422423436 0.358752315 0.206549228 7.486026767 0.109667172 0.143471852 7.12E-07 6.147704226 -0.734625963 SPS(ph)GSAFGSQENLR ddPTM_A459_MK2206_30min_R2 1 SPSGSAFGSQENLR 14 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.166)PS(0.833)GS(0.001)AFGSQENLR 94.45 0.013191 41649000 9203.3 11298 2832.7 10773 8785 11054 11930 8741.5 12054 4177.1 TRUE FALSE 9907.911724 10736.95775 2927.140804 9892.811439 8440.056759 11474.66772 10363.57667 9884.044064 13102.43513 4040.801569 2.451966907 2.657135612 0.724396077 2.448229954 2.088708543 2.839700866 2.564732886 2.446060242 3.242533667 1 11.98042579 -6.446131243 2.530571144 2.510288934 2.011393012 0.035458695 0.737045115 0.778873363 9.824686757 0.247758141 0.278421285 3.58E-07 6.446131243 -0.498895922 SPS(ph)KPLPEVTDEYKNDVK ddPTM_A459_MK2206_30min_R2 1 SPSKPLPEVTDEYKNDVK 18 2 P05455;E9PFL9;E7ERC4;E9PGX9 P05455 SSB Lupus La protein 1 S(0.143)PS(0.857)KPLPEVTDEYKNDVK 62.055 0.016941 23228000 64948 67707 70161 56479 64557 36228 79248 58212 50116 74455 TRUE FALSE 69920.46882 64344.76884 72500.13272 51864.48503 62022.16781 37606.68193 68842.64241 65820.50827 54474.99909 72025.53945 0.970773275 0.893360457 1.006589236 0.720084645 0.861113548 0.52212982 0.955808772 0.91384957 0.756328929 1 16.13622094 -5.75288394 24.99607002 0.810035312 0.95055294 0.187765939 0.130922838 314.2595169 918148.8819 0.035356263 0.060008878 1.77E-06 5.75288394 0.140517628 SPS(ph)LDNPTPFPNLGPSENPLKR ddPTM_A459_MK2206_30min_R2 1 SPSLDNPTPFPNLGPSENPLKR 22 1 M0R0R8;M0R0X9;M0QXC8;M0QX56;M0R3C2;M0QYT9;M0R205;M0QZB8;M0QZB7;Q14653-3;Q14653-2;Q14653;Q14653-4 M0R0R8 IRF3 Interferon regulatory factor 3 1 S(0.276)PS(0.44)LDNPT(0.284)PFPNLGPSENPLKR 63.044 0.0049849 20722000 55626 78016 55992 69639 75044 70158 83847 64046 64127 66880 TRUE FALSE 59884.76933 74141.83889 57858.74533 63949.27094 72097.39549 72827.91185 72837.78818 72417.0321 69704.65054 64697.71108 0.925608779 1.145973136 0.894293544 0.988431737 1.114373203 1.125664427 1.12581708 1.119313665 1.077389747 1 15.98142705 -6.259256754 24.65104089 1.102923479 0.993084871 0.340050353 0.070989746 177.2793462 2002228.422 0.020583708 0.025276775 5.50E-07 6.259256754 -0.109838608 SPS(ph)LGSDLTFATR ddPTM_A459_MK2206_30min_R1 1 SPSLGSDLTFATR 13 0 Q13425 Q13425 SNTB2 Beta-2-syntrophin 1 S(0.376)PS(0.623)LGS(0.001)DLTFATR 157.33 0.00036495 8057100 363.87 227.01 404.94 325.09 272.92 421.36 374.95 322.46 290.46 279.07 TRUE FALSE 332.9209457 212.2316077 377.453801 350.1284881 262.0490185 445.2170391 349.9377696 319.6407662 320.6543564 313.6432985 1.061463603 0.676665527 1.203449278 1.116327018 0.835500136 1.419501202 1.115718944 1.019121938 1.022353604 1 8.292980927 -5.275198009 24.94045409 1.096503056 0.86906454 0.220287787 0.167177661 960.2748912 1740703.761 0.042849031 0.089950866 5.31E-06 5.275198009 -0.227438516 SPS(ph)LSPSPPSPLEK ddPTM_A459_MK2206_30min_R1 1 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.004)PS(0.908)LS(0.058)PS(0.028)PPS(0.003)PLEK 155.43 0.00032841 8689300 4315 6034.2 4578.8 4526.1 4370.2 4115.8 5031.1 4379.2 4697.5 4328.4 TRUE FALSE 3947.986591 5641.372483 4268.003813 4874.701006 4196.12568 4348.833039 4695.484499 4340.913116 5185.821935 4864.63487 0.811568945 1.15967028 0.877353373 1.002069248 0.862577725 0.893969055 0.965228558 0.892340994 1.066024907 1 12.24811581 -8.266331803 24.86812557 1.033012456 0.938506759 0.155338712 0.092509591 772.3960695 3926002.967 0.075409697 0.021895324 5.42E-09 8.266331803 -0.094505696 SPS(ph)MPENLNRPR ddPTM_A459_MK2206_30min_R1 5 SPSMPENLNRPR 12 1 D6RJC2;P30307-4;P30307-3;P30307-2;P30307;H0Y999 D6RJC2 CDC25C M-phase inducer phosphatase 3 1 S(0.001)PS(0.999)MPENLNRPR;SPS(1)MPENLNRPR;S(0.013)PS(0.987)MPENLNRPR;S(0.058)PS(0.942)MPENLNRPR;SPS(1)MPENLNRPR 117.27 0.014672 91621000 12332.1 13174.7 13948.1 12391.5 14016.4 12584.3 13722.3 12331.3 10981.5 10490.7 TRUE FALSE 11283.19014 12317.02464 13001.34183 13345.89548 13458.09711 13296.81219 12806.9104 12223.48874 12123.06622 11790.36712 0.956983784 1.044668458 1.102708822 1.13193214 1.141448521 1.127769141 1.08621812 1.036735211 1.028217875 1 13.52532102 -7.870067055 2.930918808 1.017345164 1.089691482 0.244000144 0.051136846 0.417690389 7.032380189 0.03749479 0.015580712 1.35E-08 7.870067055 0.072346318 SPS(ph)MPENLNRPR ddPTM_A459_MK2206_30min_R2 2 SPSMPENLNRPR 12 1 D6RJC2;P30307-4;P30307-3;P30307-2;P30307;H0Y999 D6RJC2 CDC25C M-phase inducer phosphatase 3 1 S(0.008)PS(0.992)MPENLNRPR;S(0.055)PS(0.945)MPENLNRPR 109.99 0.0040733 113621000 126237 142951 112285 164255 156161 144255 155196 123629 112200 143273 TRUE FALSE 135901.8018 135852.2612 116028.5259 150834.8411 150029.3345 149744.7251 134818.5788 139787.7348 121958.9532 138598.0137 0.980546532 0.980189092 0.837158648 1.088290063 1.082478244 1.080424755 0.972730959 1.008583969 0.879947338 1 17.08054706 -1.761940211 17.71075321 0.993914015 0.062823714 0 0.079286348 0 0 0.018988041 0 0.017300545 1.761940211 -0.931090301 SPS(ph)MPSLNQTWPELNQSSEDTAIVHPVPIR ddPTM_A459_MK2206_30min_R2 1 SPSMPSLNQTWPELNQSSEDTAIVHPVPIR 30 0 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2 E9PMG1 REPS1 RalBP1-associated Eps domain-containing protein 1 1 S(0.44)PS(0.531)MPS(0.025)LNQT(0.004)WPELNQSSEDTAIVHPVPIR 98.552 6.13E-06 0 743.17 1071.7 712.04 2256.7 1212.7 2291.4 1278 1102.5 880.97 1032.8 TRUE FALSE 800.0676666 1018.480936 735.7790582 2072.320391 1165.083305 2378.600833 1110.197065 1246.600535 957.5951782 999.0998206 0.80078852 1.019398578 0.736441988 2.074187532 1.166133034 2.380743929 1.111197342 1.247723711 0.958457962 1 9.964485015 -5.716952102 24.99946413 1.446715656 0.868927737 0.253005529 0.444951265 184.3791417 103609.7716 0.119460326 0.206910089 1.92E-06 5.716952102 -0.577787918 SPS(ph)PAHLPDDPK ddPTM_A459_MK2206_30min_R1 3 SPSPAHLPDDPK 12 0 Q92615;H0Y4V9;A0A087X183;H0Y641 Q92615 LARP4B La-related protein 4B 1 S(0.062)PS(0.938)PAHLPDDPK;S(0.01)PS(0.99)PAHLPDDPK;S(0.024)PS(0.976)PAHLPDDPK 206.46 1.03E-05 190429000 17314.7 17927.2 18573.8 15026.2 16208.3 14619.1 16929.9 17305.5 15472.4 14969.5 TRUE FALSE 15841.99384 16760.13602 17313.06221 16183.52053 15562.68909 15446.82081 15800.53726 17154.19984 17080.81135 16824.03467 0.941628697 0.996201942 1.029067197 0.961928624 0.925027164 0.918140096 0.939164568 1.019624613 1.015262491 1 14.03823611 -7.771168546 24.98812287 1.013082683 0.960147688 0.368039011 0.031706499 262.9971586 675462.6783 0.019778871 0.009684705 1.69E-08 7.771168546 -0.052934995 SPS(ph)PAHLPDDPK ddPTM_A459_MK2206_30min_R2 1 SPSPAHLPDDPK 12 0 Q92615;H0Y4V9;A0A087X183;H0Y641 Q92615 LARP4B La-related protein 4B 1 S(0.053)PS(0.947)PAHLPDDPK 151.99 0.00050765 167420000 113410 102890 113560 113320 111520 81730 130510 100980 96707 106860 TRUE FALSE 122092.7568 97780.63222 117346.0337 104061.3935 107141.1645 84840.29242 113373.8802 114178.4327 105118.4001 103373.167 1.181087514 0.945899551 1.135169185 1.006657691 1.036450441 0.820718712 1.096743803 1.104526794 1.016882844 1 16.65750222 -4.743196274 24.53860782 1.021544185 1.181088154 0.247295799 0.08510841 1461.741314 1966040.782 0.021337233 0.681140005 1.81E-05 4.743196274 0.15954397 SPS(ph)PEPIYNSEGK ddPTM_A459_MK2206_30min_R1 3 SPSPEPIYNSEGK 13 0 Q15637-6;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-6;Q15637-5 SF1 Splicing factor 1 1 S(0.317)PS(0.683)PEPIYNSEGK;S(0.126)PS(0.874)PEPIYNSEGK;S(0.463)PS(0.537)PEPIYNSEGK 176.43 0.0001012 58057300 5979.9 7117.3 6901.2 4826.4 5262.5 5644.3 7195.4 4918.2 7457.5 7371.8 TRUE FALSE 5471.278103 6653.962476 6432.765772 5198.130164 5052.883481 5963.875388 6715.407995 4875.200696 8232.733812 8285.074238 0.66037768 0.803126476 0.77642826 0.627409003 0.609877876 0.719833669 0.810542887 0.588431746 0.993682564 1 13.01629891 -8.276717447 24.62083659 0.996841416 0.704510035 0.713510797 0.075310574 414.4657113 667909.8147 0.073308474 0.0192349 5.29E-09 8.276717447 -0.292331382 SPS(ph)PEPIYNSEGK ddPTM_A459_MK2206_30min_R2 1 SPSPEPIYNSEGK 13 0 Q15637-6;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-6;Q15637-5 SF1 Splicing factor 1 1 S(0.198)PS(0.802)PEPIYNSEGK 184 0.00012206 32503000 44218 42355 42998 46885 29050 35697 47297 41690 33661 40465 TRUE FALSE 47603.36408 40251.71229 44431.53186 43054.34552 27909.35104 37055.47435 41086.84709 47139.02614 36588.77293 39144.63036 1.216089247 1.028281834 1.135060708 1.099878709 0.712980319 0.946629819 1.049616428 1.204227137 0.93470733 1 15.2565268 -4.293663277 0.877918649 0.998496939 1.509927807 0.202340078 0.12587901 9.01190666 2.991939702 0.047240751 5.432412863 5.09E-05 4.293663277 0.511430868 SPS(ph)PFTHTHLAQGYR ddPTM_A459_MK2206_30min_R1 1 SPSPFTHTHLAQGYR 15 0 P38398-8;P38398-4;P38398;P38398-7;Q5YLB2 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 S(0.042)PS(0.955)PFT(0.003)HTHLAQGYR 133.87 0.00033098 8336600 1852.8 1931.5 2079.8 1397.9 2280.9 2026 1998.2 1629.2 1607.7 1638.3 TRUE FALSE 1695.209631 1805.758999 1938.628971 1505.5665 2190.046923 2140.710369 1864.903724 1614.956076 1774.826168 1841.264973 0.92067663 0.980716532 1.052878863 0.81768052 1.189425181 1.162630258 1.012838321 0.877090533 0.963916761 1 10.84648154 -4.851579638 3.342980425 1.010748502 0.915100945 0.059593673 0.106916642 0.946494501 17.49846825 0.029019937 0.210729883 1.41E-05 4.851579638 -0.095647557 SPS(ph)PFTHTHLAQGYR ddPTM_A459_MK2206_30min_R2 2 SPSPFTHTHLAQGYR 15 0 P38398-8;P38398-4;P38398;P38398-7;Q5YLB2 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 S(0.034)PS(0.966)PFTHTHLAQGYR;S(0.024)PS(0.974)PFT(0.002)HTHLAQGYR 178.47 1.31E-05 17047400 25813 32058 32852 38470 37131 32548 34722 28304 29244 34190 TRUE FALSE 27789.26313 30466.04634 33947.26928 35326.87794 35673.05037 33786.63695 30162.95969 32003.42998 31787.59026 33074.3831 0.840205032 0.921137251 1.026391609 1.068103911 1.078570393 1.02153491 0.911973463 0.967619861 0.961093973 1 15.01342663 -4.991078664 3.003866439 1.005144425 0.841304974 0.550840058 0.04734264 0.23931217 4.075746008 0.014409278 0.07460315 1.02E-05 4.991078664 -0.163839451 SPS(ph)PHSCHR ddPTM_A459_MK2206_30min_R2 2 SPSPHSCHR 9 0 P21580;A0A087WU80;D3TTY5 P21580 TNFAIP3 Tumor necrosis factor alpha-induced protein 3;A20p50;A20p37 1 S(0.058)PS(0.941)PHS(0.001)CHR;S(0.003)PS(0.991)PHS(0.006)CHR 80.014 0.031408 808990 0 591.73 728.78 2271.46 3409.7 4013 2047.88 14261.9 11320.5 1510.51 TRUE FALSE 0 562.3455487 753.0771615 2085.874452 3275.818046 4165.717527 1778.990896 16125.9793 12305.13663 1461.222182 0 0.384846025 0.515374849 1.427486167 2.241834325 2.850844709 1.217467759 11.03595298 8.421126353 1 10.51295984 -7.740085047 24.96299198 7.546403908 1.282073113 0.506578918 2.494826093 154.043118 180075.1352 1.130664431 0.651992921 1.82E-08 7.740085047 -6.264330795 SPS(ph)PISISSSETSSIMQK ddPTM_A459_MK2206_30min_R2 2 SPSPISISSSETSSIMQK 18 0 Q5VT06 Q5VT06 CEP350 Centrosome-associated protein 350 1 S(0.007)PS(0.99)PIS(0.003)ISSSETSSIMQK;S(0.042)PS(0.956)PIS(0.002)ISSSETSSIMQK 135.57 0.00035861 9367100 25331 36986 32454 36790 37021 33108 39974 31671 34534 30896 TRUE FALSE 27270.36084 35149.32902 33536.00016 33784.13931 35567.36952 34367.94814 34725.36578 35810.50844 37537.7049 29887.86605 0.912422479 1.176040101 1.122060709 1.130363046 1.190027065 1.149896352 1.161854972 1.198162103 1.255951323 1 14.86727227 -4.759116633 24.99892615 1.159544739 0.912422158 0.567174005 0.063084375 42.8078642 460623.4372 0.014819007 0.096657031 1.74E-05 4.759116633 -0.24712258 SPS(ph)PISNQPSPR ddPTM_A459_MK2206_30min_R2 3 SPSPISNQPSPR 12 0 F6SS63;Q8N5C8-2;Q8N5C8 F6SS63 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 1 S(0.003)PS(0.997)PISNQPSPR;S(0.013)PS(0.985)PIS(0.002)NQPSPR;S(0.078)PS(0.92)PIS(0.002)NQPSPR 162.67 0.00049361 37583500 21647.9 29111.5 31554.9 28980 29846.5 26849.9 26042 25222 21517.5 22622.4 TRUE FALSE 23305.27987 27665.86524 32606.92462 26612.2413 28674.57644 27871.69176 22622.65412 28518.602 23389.05326 21884.23294 1.064934738 1.264191682 1.489973384 1.216046337 1.310284739 1.273596924 1.033742155 1.303157487 1.068762763 1 14.4176042 -7.197017763 10.5208112 1.126736416 1.279105159 0.295820681 0.124390204 0.993413779 159.5756566 0.047423918 0.036720247 6.35E-08 7.197017763 0.152368744 SPS(ph)PLSGHVAQAFPTK ddPTM_A459_MK2206_30min_R2 1 SPSPLSGHVAQAFPTK 16 0 Q6P0Q8;A0A669KBJ4 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 S(0.005)PS(0.994)PLSGHVAQAFPTK 103.75 0.0042348 4270600 17312 24610 23258 31902 27381 27085 32535 23963 26106 25393 TRUE FALSE 18637.42003 23387.90319 24033.41011 29295.50455 26305.88436 28115.73865 28263.11542 27095.04638 28376.65269 24564.42849 0.758715801 0.952104511 0.978382628 1.192598662 1.070893401 1.144571251 1.150570852 1.103019612 1.155192872 1 14.58428305 -4.839193488 1.100210476 1.121773334 0.614206265 0.777019502 0.058933605 0.648105783 0.691917502 0.017518752 0.376026339 1.45E-05 4.839193488 -0.507567069 SPS(ph)PLTGK ddPTM_A459_MK2206_30min_R2 1 SPSPLTGK 8 0 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 S(0.43)PS(0.57)PLT(0.001)GK 86.898 0.033227 9933300 86577 80871 73570 93466 80412 93727 89746 67435 72462 96201 TRUE FALSE 93205.40169 76855.06374 76022.78708 85829.52882 77254.62084 97293.84666 77962.2424 76248.98604 78764.61378 93061.96925 1.001541257 0.825848242 0.81690499 0.922283609 0.830141694 1.045473757 0.837745462 0.819335617 0.846367366 1 16.5059041 -4.745588066 24.87141187 0.878255858 1.001541624 0.173639635 0.077250847 1519.144879 2383467.051 0.018908888 0.472251191 1.80E-05 4.745588066 0.123285766 SPS(ph)PLVSLQAVK ddPTM_A459_MK2206_30min_R2 2 SPSPLVSLQAVK 12 0 Q9UPZ3;Q9UPZ3-2 Q9UPZ3 HPS5 Hermansky-Pudlak syndrome 5 protein 1 S(0.498)PS(0.502)PLVSLQAVK;S(0.466)PS(0.534)PLVSLQAVK 136.33 0.0014159 93708000 85826 102420 88934 107423 104845 114299 122272 77290 96230 99541 TRUE FALSE 92396.90455 97333.97173 91899.01517 98646.19727 100728.2585 118648.7285 106217.5395 87392.06838 104599.9115 96292.98532 0.959539308 1.010810615 0.954368741 1.024438041 1.04606019 1.232163777 1.103066222 0.907564223 1.086267199 1 16.55514309 -6.069794909 2.988956815 1.068135946 0.979095662 0.19669678 0.078416531 0.467457654 8.190233961 0.025940637 0.036563363 8.52E-07 6.069794909 -0.089040284 SPS(ph)PPDGS(ph)PAATPEIR ddPTM_A459_MK2206_30min_R2 1 SPSPPDGSPAATPEIR 16 0 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 2 S(0.237)PS(0.763)PPDGS(1)PAATPEIR 142.4 0.0071787 5610000 17728 19928 19067 20283 20508 18974 20676 14965 16945 18607 TRUE FALSE 19085.26931 18938.4045 19702.68426 18625.81402 19702.75288 19696.06887 17961.21636 16920.97688 18418.84547 17999.85511 1.060301274 1.052142052 1.094602381 1.034775775 1.094606193 1.094234856 0.997853385 0.940061838 1.023277429 1 14.13569767 -7.350785776 5.504078129 0.983559652 1.071132209 0.686339106 0.026934204 0.12415588 5.965759315 0.011160826 0.007441106 4.46E-08 7.350785776 0.087572557 SPS(ph)PPDGSPAATPEIR ddPTM_A459_MK2206_30min_R1 2 SPSPPDGSPAATPEIR 16 0 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 S(0.078)PS(0.922)PPDGSPAATPEIR;S(0.079)PS(0.921)PPDGSPAATPEIR 271.41 1.46E-50 99318000 2936.1 2680.4 2346.42 1945.05 2362.57 2162.74 2751.4 2325.24 2324.23 2298.8 TRUE FALSE 2686.369277 2505.905473 2187.151548 2094.858088 2268.463834 2285.19247 2567.859126 2304.910672 2565.842026 2583.592699 1.039780488 0.969930544 0.846554315 0.810831401 0.878026879 0.88450183 0.993910196 0.892133916 0.993129461 1 11.33516293 -7.250774278 24.54980081 0.960804554 0.899737249 0.178028943 0.066609432 1149.230786 2645396.134 0.027928891 0.02140731 5.61E-08 7.250774278 -0.061067305 SPS(ph)PPDGSPAATPEIR ddPTM_A459_MK2206_30min_R2 3 SPSPPDGSPAATPEIR 16 0 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 S(0.006)PS(0.994)PPDGSPAATPEIR;S(0.024)PS(0.976)PPDGSPAATPEIR;S(0.07)PS(0.93)PPDGSPAATPEIR 223.14 4.24E-11 127092000 151789 161019 155046 176828 144807 163905 179041 122602 157493 159349 TRUE FALSE 163410.0825 153023.0306 160215.1563 162380.5868 139121.1496 170142.5196 155532.7016 138626.5024 171191.4565 154149.4552 1.060075641 0.992692646 1.039349481 1.053397085 0.902508215 1.103750379 1.008973411 0.899299334 1.110555054 1 17.23397026 SPS(ph)PPLPLSCSNSTR ddPTM_A459_MK2206_30min_R2 2 SPSPPLPLSCSNSTR 15 0 Q96HJ3-2;Q96HJ3 Q96HJ3-2 CCDC34 Coiled-coil domain-containing protein 34 1 S(0.083)PS(0.901)PPLPLS(0.007)CS(0.003)NS(0.003)T(0.003)R;S(0.035)PS(0.964)PPLPLSCSNSTR 88.108 0.017967 67589000 42610 64249 51530 64703 61504 56041 79051 45734 57881 51379 TRUE FALSE 45872.25436 61058.48809 53247.98448 59416.55793 59089.04393 58173.67952 68671.50874 51711.59083 62915.38476 49702.50744 0.922936422 1.228479029 1.071333967 1.195443872 1.188854385 1.17043752 1.381650792 1.040422174 1.26583925 1 15.60103102 -4.754357438 24.98272631 1.177360181 0.922935977 0.326112772 0.10683334 275.1530303 970563.1683 0.024737135 0.243376842 1.76E-05 4.754357438 -0.254424203 SPS(ph)PPLPTHIPPEPPR ddPTM_A459_MK2206_30min_R1 1 SPSPPLPTHIPPEPPR 16 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 S(0.095)PS(0.905)PPLPTHIPPEPPR 76.068 0.01977 2267900 683.96 744.86 731.58 652.58 837.39 599.34 693.99 763.41 656.69 814.54 TRUE FALSE 625.7856104 696.3694786 681.9223879 702.8418247 804.0349831 633.2741129 647.6951934 756.7355869 724.9552755 915.4513647 0.683581493 0.760684298 0.744902913 0.767754413 0.8782935 0.691761613 0.707514586 0.826625658 0.791910202 1 9.838339432 -14.52287871 0.231319754 2.29770472 0.736642174 0.643529111 0.054781822 108.1010065 1.078902961 65.60152588 0.097158488 3.00E-15 14.52287871 -1.561062546 SPS(ph)PPLPTHIPPEPPR ddPTM_A459_MK2206_30min_R2 1 SPSPPLPTHIPPEPPR 16 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 S(0.13)PS(0.869)PPLPTHIPPEPPR 117.78 0.0011393 0 7931 9238.1 7703.2 9926 7935.2 11909 7625.3 7359.3 7507.9 5715.9 TRUE FALSE 8538.203458 8779.349387 7960.020843 9115.014048 7623.624177 12362.20534 6624.08895 8321.185778 8160.923571 5529.390651 1.544149075 1.587760739 1.439583735 1.648466282 1.378745807 2.235726524 1.197978108 1.504901047 1.475917345 1 12.43290479 -9.032815554 0.78200335 0.996305354 1.590497986 0.318634896 0.252152981 2.068789385 2.026563337 0.261933104 0.085066016 9.27E-10 9.032815554 0.594192632 SPS(ph)PPLPTHIPPEPPRT(ph)PPFPAK ddPTM_A459_MK2206_30min_R2 1 SPSPPLPTHIPPEPPRTPPFPAK 23 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 2 S(0.448)PS(0.549)PPLPT(0.16)HIPPEPPRT(0.843)PPFPAK 58.712 0.020281 5902600 18877 21657 23487 24098 25724 25130 24292 20003 21042 24115 TRUE FALSE 20322.23763 20581.54487 24270.04486 22129.11631 24713.94651 26086.33976 21102.43122 22617.46078 22872.19512 23328.12952 0.871147325 0.882262971 1.040376805 0.948602257 1.059405405 1.118235379 0.904591652 0.969535974 0.980455595 1 14.50978301 -5.24754651 22.67475122 1.002284991 0.87670503 0.440762509 0.056745103 222.1651834 362592.063 0.01516536 0.039541191 5.66E-06 5.24754651 -0.125579961 SPS(ph)PSFR ddPTM_A459_MK2206_30min_R2 1 SPSPSFR 7 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 S(0.472)PS(0.527)PS(0.002)FR 88.177 0.03262 61689000 105240 210180 209470 230240 246330 265920 215410 204180 263220 196210 TRUE FALSE 113297.2553 199742.7668 216453.6253 211428.6555 236657.8465 276039.7719 187126.4082 230867.0271 286114.3998 189807.6838 0.596905526 1.052342892 1.140383893 1.113909887 1.246829642 1.454312947 0.985873725 1.216320765 1.507391029 1 17.53417887 -4.5137033 1.258440449 1.226673985 2.00E-20 0.571338631 0.159964416 1.845047507 1.64221363 0.046842002 3.445049749 3.06E-05 4.5137033 -1.226673985 SPS(ph)PSLSSLLLPSSPGPR ddPTM_A459_MK2206_30min_R1 1 SPSPSLSSLLLPSSPGPR 18 0 Q8TER5;Q8TER5-2;Q8TER5-4;Q8TER5-3 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 SPS(0.998)PS(0.002)LSSLLLPSSPGPR 231.21 6.40E-19 12489000 870.8 713.8 668.17 621.57 742.72 716.59 668.67 875.43 878.27 791.69 TRUE FALSE 796.7338872 667.3314903 622.816482 669.4434291 713.1358897 757.1627065 624.0642444 867.7762078 969.5693094 889.7705342 0.895437483 0.750004034 0.699974272 0.752377611 0.801482924 0.850964015 0.701376614 0.975280901 1.089684668 1 9.797289512 -7.8950418 5.036726871 1.041057444 0.777901996 0.770294446 0.061407573 0.09348974 3.735921858 0.035404128 0.016402694 1.27E-08 7.8950418 -0.263155448 SPS(ph)PSLSSLLLPSSPGPR ddPTM_A459_MK2206_30min_R2 2 SPSPSLSSLLLPSSPGPR 18 0 Q8TER5;Q8TER5-2;Q8TER5-4;Q8TER5-3 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 S(0.033)PS(0.964)PS(0.002)LS(0.001)SLLLPSSPGPR;S(0.463)PS(0.513)PS(0.022)LS(0.002)S(0.001)LLLPSSPGPR 153.92 5.74E-05 24826000 20180 24175 29489 34267 27789 34186 32519 22425.7 25986 29746 TRUE FALSE 21724.99632 22974.50465 30472.14854 31467.27649 26697.86423 35486.97219 28249.21624 25356.81599 28246.21531 28775.39046 0.754985283 0.798408094 1.058965597 1.093548202 0.92780198 1.233240336 0.981714437 0.881197982 0.981610149 1 14.81254788 -5.21385571 5.827120224 1.021141916 0.771302642 0.529068518 0.09180683 0.165477386 13.81734594 0.024450933 0.06572729 6.11E-06 5.21385571 -0.249839273 SPS(ph)PSPTPEAK ddPTM_A459_MK2206_30min_R1 2 SPSPSPTPEAK 11 0 Q8TAQ2;F8VXC8;Q8TAQ2-2;Q8TAQ2-3 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 1 SPS(0.999)PS(0.001)PTPEAK;S(0.024)PS(0.974)PS(0.002)PTPEAK 167.84 0.00051349 12184000 7277.7 7459.1 6814.5 6355.1 6519.8 6005.3 7403.6 6127.6 6823.8 6728.3 TRUE FALSE 6658.693398 6973.511234 6351.950726 6844.570903 6260.10256 6345.314896 6909.719353 6074.027039 7533.158429 7561.8526 0.880563765 0.922196134 0.839999278 0.905144713 0.827853026 0.839121738 0.913760122 0.803245892 0.996205405 1 12.88452401 -8.281553964 24.51892811 0.998102785 0.868124303 0.664199971 0.037419236 417.9497251 509458.9664 0.034324581 0.008913281 5.23E-09 8.281553964 -0.129978482 SPS(ph)PVLR ddPTM_A459_MK2206_30min_R1 2 SPSPVLR 7 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-2 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(0.077)PS(0.923)PVLR;S(0.324)PS(0.676)PVLR 117.81 0.011325 80629000 4590.9 4826.4 4351.2 3557.2 4610.3 4214 5024.9 4200.5 3767.1 3404.1 TRUE FALSE 4200.419847 4512.200483 4055.852667 3831.17616 4426.661989 4452.593038 4689.698089 4163.775471 4158.703526 3825.825608 1.097912001 1.179405688 1.060124816 1.001398535 1.157047509 1.163825405 1.225800277 1.088333839 1.087008126 1 11.9015554 -8.633328981 1.985746665 1.000877481 1.123726406 0.270262921 0.06083186 0.707507388 5.954987085 0.063160856 0.017583852 2.33E-09 8.633328981 0.122848924 SPS(ph)PVLR ddPTM_A459_MK2206_30min_R2 1 SPSPVLR 7 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-2 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(0.349)PS(0.651)PVLR 83.998 0.038249 56978000 24126 37422 26301 29172 23887 29006 32048 25212 26378 28035 TRUE FALSE 25973.10511 35563.6779 27177.86221 26788.55428 22949.07636 30109.84366 27840.0591 28507.29497 28672.31076 27120.22025 0.957702588 1.311334406 1.002125424 0.987770528 0.846198008 1.110235956 1.026542515 1.051145408 1.057230011 1 14.72708127 SPS(ph)PVQGK ddPTM_A459_MK2206_30min_R1 1 SPSPVQGK 8 0 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 S(0.024)PS(0.976)PVQGK 99.788 0.018368 33525000 11191 9996.6 6978 7643.2 5109.9 5134.7 11179 10869 781.66 5115.9 TRUE FALSE 10239.14668 9345.819523 6504.352802 8231.880588 4906.361863 5425.422277 10433.26931 10773.97348 862.9163542 5749.696315 1.780815216 1.625445765 1.131251538 1.431707022 0.853325392 0.943601536 1.814577455 1.873833484 0.150080336 1 12.48927004 -5.149007519 3.547286686 1.196018378 1.756050587 0.177914435 0.471148622 0.455297312 10.2788334 0.12342511 0.400166096 7.10E-06 5.149007519 0.56003221 SPS(ph)WQRPNQGVPSTGR ddPTM_A459_MK2206_30min_R2 1 SPSWQRPNQGVPSTGR 16 1 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6;A0A0A0MSP3 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 S(0.378)PS(0.61)WQRPNQGVPS(0.006)T(0.006)GR 59.248 0.042523 11165000 3610.7 6076.3 513.56 4276.7 3184.3 1309.4 3908.1 3339.7 1554.2 3799.2 TRUE FALSE 3887.137968 5774.559778 530.6818341 3927.27993 3059.268382 1359.230135 3394.961776 3776.210257 1689.381507 3675.232415 1.057657729 1.571209416 0.144394088 1.068580021 0.832401339 0.369835151 0.923740703 1.027475226 0.459666578 1 11.84361977 -5.238005385 24.99884611 0.739296784 1.314433573 0.353737137 0.316638701 844.0465396 900406.4199 0.076562853 0.202297103 5.78E-06 5.238005385 0.575136789 SPSDLHIS(ph)PLAK ddPTM_A459_MK2206_30min_R2 4 SPSDLHISPLAK 12 0 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 SPSDLHIS(1)PLAK;SPSDLHIS(1)PLAK;SPSDLHIS(1)PLAK;SPSDLHIS(1)PLAK 88.507 0.017896 31930700 307651 385760 312029 381659 422953 397630 447630 323811 339905 355046 TRUE FALSE 331204.9971 366603.7193 322431.8911 350476.2388 406345.7401 412762.0883 388855.6433 366134.2095 369469.3225 343460.8781 0.964316515 1.067381302 0.938773268 1.020425502 1.183091775 1.201773228 1.132168663 1.066014306 1.07572462 1 18.38978625 -6.103147057 6.285138802 1.118384895 0.9950248 0.435109601 0.062688423 0.222642275 11.50256545 0.019101235 0.024871439 7.89E-07 6.103147057 -0.123360095 SPSDSST(ph)ASTPVAEQIER ddPTM_A459_MK2206_30min_R1 1 SPSDSSTASTPVAEQIER 18 0 Q16643-3;Q16643;Q16643-2;D6R9Q9 Q16643-3 DBN1 Drebrin 1 SPSDSS(0.005)T(0.442)AS(0.277)T(0.277)PVAEQIER 181.69 2.47E-09 6987100 1123.1 1274.8 1315.4 1240.2 1360.4 1171.2 1430.3 1247 1301 985.64 TRUE FALSE 1027.574447 1191.810288 1226.114313 1335.720419 1306.212387 1237.512332 1334.887297 1236.09761 1436.243606 1107.748524 0.927624298 1.075885241 1.106852581 1.205797516 1.179159673 1.117141937 1.20504543 1.115864822 1.29654301 1 10.11341469 -4.622252673 1.255069828 1.164654264 0.753836629 0.46988894 0.073793861 1.5980787 1.696807726 0.020318866 0.934862218 2.39E-05 4.622252673 -0.410817635 SPSDSSTAS(ph)TPVAEQIER ddPTM_A459_MK2206_30min_R1 1 SPSDSSTASTPVAEQIER 18 0 Q16643-3;Q16643;Q16643-2;D6R9Q9 Q16643-3 DBN1 Drebrin 1 SPSDSSTAS(0.5)T(0.5)PVAEQIER 239.33 5.69E-25 7028900 2855.1 2891.5 3291.5 2806.3 3188.6 3136.6 3280.9 2998.9 2609 2152.9 TRUE FALSE 2612.258752 2703.262824 3068.082151 3022.441712 3061.59131 3314.191581 3062.037147 2972.680933 2880.214886 2419.617506 1.079616405 1.117227338 1.268002956 1.24914029 1.265320367 1.369717145 1.265504626 1.228574734 1.190359584 1 11.24056329 -5.175171122 4.401720387 1.245995263 1.089277369 0.241510569 0.089894794 0.260877909 8.953144973 0.02216691 0.064407888 6.68E-06 5.175171122 -0.156717894 SPSDSSTAS(ph)TPVAEQIER ddPTM_A459_MK2206_30min_R2 2 SPSDSSTASTPVAEQIER 18 0 Q16643-3;Q16643;Q16643-2;D6R9Q9 Q16643-3 DBN1 Drebrin 1 SPSDSST(0.001)AS(0.633)T(0.367)PVAEQIER;SPSDS(0.019)S(0.077)T(0.02)AS(0.441)T(0.441)PVAEQIER 245.04 1.03E-25 18390600 29045.7 34532.4 37383 39947 33218.6 37218 41501.6 24832.4 37729 38522 TRUE FALSE 31269.46112 32817.57123 38629.33056 36683.20232 31914.27085 38634.35707 36052.39007 28078.07994 41010.60022 37265.03029 0.839110042 0.880653282 1.036610738 0.984386757 0.856413388 1.036745624 0.96745903 0.753469935 1.100511657 1 15.18553481 -5.040781651 9.435640471 0.957473088 0.849291138 0.173486536 0.093581036 0.724715479 165.9990716 0.023056563 0.062573005 9.10E-06 5.040781651 -0.10818195 SPSEGQTATT(ph)SPR ddPTM_A459_MK2206_30min_R2 1 SPSEGQTATTSPR 13 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 SPSEGQTAT(0.022)T(0.489)S(0.489)PR 116.79 0.0087531 12269000 23676 36044 29759 31699 32773 37645 32001 27392 28594 29215 TRUE FALSE 25488.65276 34254.10737 30751.15021 29109.0903 31486.16735 39077.60685 27799.23026 30972.22845 31081.05443 28261.71694 0.901879133 1.212032073 1.088084997 1.029983081 1.114092516 1.382704629 0.983635577 1.095907532 1.099758182 1 14.78656149 -4.744565909 24.8401168 1.116031371 0.90187845 0.247361967 0.10962735 1385.529073 2039574.638 0.027141513 0.754540563 1.80E-05 4.744565909 -0.214152921 SPSEGQTATTS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SPSEGQTATTSPR 13 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 SPSEGQT(0.001)AT(0.033)T(0.119)S(0.847)PR 106.3 0.0070062 10375000 31607 32604 28663 30943 30039 33820 32416 28693 28383 28205 TRUE FALSE 34026.85622 30984.93277 29618.61011 28414.85792 28859.51793 35107.0438 28159.74026 32443.27362 30851.70204 27284.67316 1.247105143 1.135616783 1.08554022 1.041421964 1.057719026 1.28669468 1.032071746 1.18906587 1.130733795 1 14.73580314 -11.75049413 2.258070279 0.572928651 1.130765824 0.194874937 0.081470921 6955312.002 1718373.967 15069956.86 0.020004952 1.78E-12 11.75049413 0.557837173 SPSFGDPQLS(ph)PEAR ddPTM_A459_MK2206_30min_R1 2 SPSFGDPQLSPEAR 14 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 SPSFGDPQLS(1)PEAR;SPSFGDPQLS(1)PEAR 146.1 0.00050425 19291700 3709.2 3793 3933.3 2905.2 3472.9 3578.8 4131.9 3289.4 4129.7 4527.6 TRUE FALSE 3393.713062 3546.075011 3666.318555 3128.959007 3334.567039 3781.428563 3856.26849 3260.641123 4558.997093 5088.51327 0.666936074 0.696878405 0.720508793 0.614906328 0.655312635 0.743130334 0.757837955 0.640784636 0.895938922 1 12.31302848 -8.427275163 3.636864287 0.997680002 0.689496542 0.855935324 0.043687284 0.077879406 1.845567004 0.043980636 0.011628522 3.74E-09 8.427275163 -0.30818346 SPSFGDPQLS(ph)PEAR ddPTM_A459_MK2206_30min_R2 2 SPSFGDPQLSPEAR 14 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 SPSFGDPQLS(1)PEAR;SPSFGDPQLS(1)PEAR 160.03 0.00029381 29698000 83565 80831 79616 87064 82015 70849 95367 72559 70003 87594 TRUE FALSE 89962.80065 76817.05008 82270.3577 79950.5927 78794.67901 73545.20834 82845.19834 82042.71043 76091.7344 84735.81495 1.061685672 0.906547605 0.970904189 0.943527748 0.929886366 0.86793534 0.977688105 0.968217636 0.897987875 1 16.37068426 -4.752031103 24.95957882 0.938945124 1.061685919 0.469265985 0.038703398 325.3158368 862980.4959 0.009353405 0.116295688 1.77E-05 4.752031103 0.122740794 SPSFGDPQLS(ph)PEARPR ddPTM_A459_MK2206_30min_R1 2 SPSFGDPQLSPEARPR 16 1 O95425-3 O95425-3 SVIL Supervillin 1 SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR 169.6 6.09E-06 37728000 6690 6715.1 6577.2 5802.8 7414 5938.3 6736.9 6728.5 5381.4 4563.4 TRUE FALSE 6120.980369 6277.945769 6130.757989 6249.732661 7118.684681 6274.521414 6287.493693 6669.673434 5940.815788 5128.748444 1.193464729 1.224069739 1.195371162 1.218568766 1.387996459 1.223402061 1.225931387 1.300448542 1.158336357 1 12.3243911 -8.578456188 4.568226248 1.000064169 1.245656549 0.650580822 0.055372515 0.180641089 11.61872162 0.055127468 0.014373781 2.64E-09 8.578456188 0.24559238 SPSFGDPQLS(ph)PEARPR ddPTM_A459_MK2206_30min_R2 4 SPSFGDPQLSPEARPR 16 1 O95425-3 O95425-3 SVIL Supervillin 1 SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR 171.25 4.55E-06 65706700 111347 131056 128635 153487 141756 148343 137674 114287 137758 123531 TRUE FALSE 119871.8119 124547.9496 132923.6267 140946.6211 136189.9472 153988.2968 119597.2384 129224.7033 149739.9418 119500.1936 1.003109772 1.042240568 1.112329802 1.179467722 1.139662984 1.288602907 1.000812089 1.081376519 1.253051877 1 16.86665343 -5.223052238 2.564112151 1.139508842 1.008913489 0.200803694 0.088919134 0.462475878 5.775082492 0.023878872 0.083760671 5.98E-06 5.223052238 -0.130595353 SPSGPVKS(ph)PPLSPVGTTPVK ddPTM_A459_MK2206_30min_R1 1 SPSGPVKSPPLSPVGTTPVK 20 1 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 1 S(0.07)PS(0.304)GPVKS(0.624)PPLS(0.001)PVGTTPVK 55.453 0.024498 12416000 3659.7 4257 3860.2 3848.6 3463.6 3396.7 4062.5 3824.4 3680.4 3357.3 TRUE FALSE 3348.423297 3979.868526 3598.180379 4145.019839 3325.637478 3589.018219 3791.498037 3790.963674 4062.99075 3773.22767 0.887416183 1.054765011 0.953608076 1.098534253 0.881377369 0.951179874 1.004842106 1.004700486 1.076794486 1 11.88158344 -7.792889938 2.393537864 1.036952747 0.976692001 0.128313292 0.0654749 0.645227688 7.325431363 0.043047161 0.018108676 1.61E-08 7.792889938 -0.060260746 SPSGPVKS(ph)PPLSPVGTTPVK ddPTM_A459_MK2206_30min_R2 2 SPSGPVKSPPLSPVGTTPVK 20 1 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 1 S(0.002)PS(0.007)GPVKS(0.952)PPLS(0.032)PVGT(0.005)T(0.002)PVK;S(0.033)PS(0.045)GPVKS(0.888)PPLS(0.034)PVGTTPVK 64.331 0.0099908 27916000 77119 87878 87987 90810 90395 67388 96747 76803 71492 89454 TRUE FALSE 83023.28993 83514.10631 90920.44267 83390.53251 86845.6381 69952.49756 84044.00269 86841.4158 77710.24493 86535.12331 0.959417249 0.965089124 1.050676756 0.963661105 1.003588309 0.808371155 0.971212607 1.003539517 0.898019694 1 16.4009982 SPSGSAFGS(ph)QENLR ddPTM_A459_MK2206_30min_R1 2 SPSGSAFGSQENLR 14 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 SPS(0.001)GSAFGS(0.998)QENLR;SPSGSAFGS(1)QENLR 179.55 7.28E-05 24436000 2609.7 2559.39 2288.69 2002.05 2645.3 2498.31 3016.6 2563.66 2079.52 2376.8 TRUE FALSE 2387.731311 2392.773246 2133.340099 2156.248238 2539.932099 2639.762153 2815.368118 2541.246191 2295.693546 2671.255928 0.893860931 0.895748408 0.79862812 0.807203913 0.950838171 0.988210125 1.053949226 0.951330108 0.859406065 1 11.38330249 -6.376655405 5.324022009 0.972231837 0.849092522 0.534586896 0.054288221 0.19477679 7.808856263 0.018415567 0.020915731 4.20E-07 6.376655405 -0.123139315 SPSGSAFGS(ph)QENLR ddPTM_A459_MK2206_30min_R2 1 SPSGSAFGSQENLR 14 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 SPSGSAFGS(1)QENLR 102.15 0.0077876 19915000 11547 18122 14794 17024 20885 17590 13098 15632 13364 24800 TRUE FALSE 12431.0472 17222.08783 15287.22458 15633.08474 20064.94996 18259.39978 11378.21687 17675.15607 14526.37656 23990.77803 0.518159402 0.717862831 0.637212539 0.651628919 0.836360952 0.761100776 0.474274609 0.736747931 0.605498352 1 14.55019233 -11.66514802 2.394210489 1.732692055 0.665639043 0.487748747 0.104419615 8147985.561 2007413.138 32440830.66 0.026499294 2.16E-12 11.66514802 -1.067053012 SPSKDAS(ph)SGK ddPTM_A459_MK2206_30min_R1 1 SPSKDASSGK 10 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 SPSKDAS(0.986)S(0.014)GK 89.047 0.017263 9963400 4889.2 5116.9 4839.2 4599.2 5104.8 4287.5 5220.8 4451.5 4024.2 3948.7 TRUE FALSE 4473.347866 4783.78888 4510.728587 4953.431181 4901.465006 4530.254545 4872.529958 4412.581005 4442.529991 4437.894767 1.00798872 1.077941035 1.016411795 1.116166886 1.10445724 1.02081162 1.097937246 0.994295998 1.001044465 1 12.11565974 -7.778671372 24.97873956 0.998252631 1.063882007 0.403029229 0.036050684 248.4621257 360154.6032 0.019396878 0.009355173 1.66E-08 7.778671372 0.065629377 SPSLDNPT(ph)PFPNLGPSENPLKR ddPTM_A459_MK2206_30min_R1 1 SPSLDNPTPFPNLGPSENPLKR 22 1 M0R0R8;M0R0X9;M0QXC8;M0QX56;M0R3C2;M0QYT9;M0R205;M0QZB8;M0QZB7;Q14653-3;Q14653-2;Q14653;Q14653-4 M0R0R8 IRF3 Interferon regulatory factor 3 1 S(0.064)PS(0.007)LDNPT(0.929)PFPNLGPSENPLKR 131.9 2.79E-05 23177000 1357.3 1410.1 1499.5 1028 1241.5 1292.9 1615.1 1198.1 1609.5 2128.7 TRUE FALSE 1241.854508 1318.302234 1397.718118 1107.176738 1192.048426 1366.102881 1507.359626 1187.625138 1776.813285 2392.419427 0.519078926 0.551033075 0.584227875 0.462785382 0.498260636 0.57101312 0.63005659 0.49641176 0.742684692 1 11.22425462 -8.55540673 2.814714781 0.99955155 0.541215452 0.903099951 0.047301188 0.079010733 1.567413821 0.047348173 0.012692078 2.78E-09 8.55540673 -0.458336098 SPSLS(ph)PSPPSPLEK ddPTM_A459_MK2206_30min_R1 1 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SPS(0.03)LS(0.912)PS(0.055)PPS(0.003)PLEK 119.96 0.0021358 5491100 1721.8 2676.4 1876.7 1702 2222.4 2133 2356 1838.2 1941.4 2053.6 TRUE FALSE 1575.351868 2502.165874 1749.314833 1833.088335 2133.877102 2253.768617 2198.835539 1822.128811 2143.215477 2308.015472 0.682556893 1.084120061 0.757930289 0.794227057 0.924550605 0.976496321 0.95269532 0.789478595 0.928596668 1 11.17243718 -6.286636569 22.75514896 0.921706167 0.842753807 0.156795067 0.110046587 587.256521 530338.5905 0.033619227 0.038145402 5.17E-07 6.286636569 -0.07895236 SPSLS(ph)PSPPSPLEK ddPTM_A459_MK2206_30min_R2 2 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.004)PS(0.001)LS(0.475)PS(0.34)PPS(0.18)PLEK;S(0.004)PS(0.065)LS(0.443)PS(0.244)PPS(0.244)PLEK 93.716 0.022361 5630200 27404 39222 22628 30852 29853 31266 38273 28735 27454 35141 TRUE FALSE 29502.07131 37274.29251 23382.40623 28331.29291 28680.82122 32455.84954 33247.70913 32490.76316 29841.89929 33994.35205 0.867852144 1.096484865 0.68783209 0.833411764 0.843693717 0.954742408 0.978036266 0.95576945 0.877848745 1 15.05300745 -6.770213019 24.45109699 0.952062295 0.866975137 0.167444271 0.097435872 299.0902248 833522.736 0.03509737 0.031438769 1.70E-07 6.770213019 -0.085087158 SPSLSPSPPS(ph)PLEK ddPTM_A459_MK2206_30min_R1 4 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SPSLSPS(0.002)PPS(0.998)PLEK;SPSLSPS(0.019)PPS(0.981)PLEK;SPSLS(0.001)PS(0.027)PPS(0.972)PLEK;SPSLSPS(0.008)PPS(0.992)PLEK 205.28 1.40E-05 1797630000 20734.8 23402.9 22979.7 19519.4 18381.5 16307.1 18864.9 17448.6 18909.9 16961.6 TRUE FALSE 18971.19638 21879.36696 21419.90199 21022.78757 17649.32593 17230.39391 17606.45694 17296.04873 20875.65177 19062.93106 0.995187798 1.147744116 1.123641581 1.10280982 0.925845342 0.903869077 0.923596528 0.907313187 1.095091395 1 14.21848234 -6.256680401 24.7153008 0.950096267 1.098538269 0.495905063 0.065209369 266.3074195 1383041.084 0.019407344 0.024225062 5.54E-07 6.256680401 0.148442002 SPSLSPSPPS(ph)PLEK ddPTM_A459_MK2206_30min_R2 8 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SPSLS(0.002)PS(0.329)PPS(0.67)PLEK;SPSLSPS(0.004)PPS(0.996)PLEK;S(0.001)PS(0.001)LS(0.003)PS(0.03)PPS(0.966)PLEK;SPS(0.001)LS(0.001)PS(0.158)PPS(0.84)PLEK;SPSLS(0.001)PS(0.072)PPS(0.927)PLEK;SPSLSPS(0.005)PPS(0.995)PLEK;SPSLSPS(0.072)PPS(0.928)PLEK;SPSLSPS(0.059)PPS(0.941)PLEK 200 7.53E-05 1789951000 485280 617115 493719.2 490436 515134 380586.9 572716 456375.7 411957.4 532470.8 TRUE FALSE 522433.4099 586469.9665 510179.5517 450365.81 494907.2508 395070.4012 497517.7012 516025.571 447788.71 515096.3214 1.01424411 1.138563686 0.99045466 0.87433319 0.960805252 0.766983542 0.96587314 1.001804031 0.869330048 1 18.97448271 -5.51174581 5.292510578 0.917736259 1.0752754 0.425974141 0.072639862 0.151265738 13.27103417 0.019245693 0.037649815 3.08E-06 5.51174581 0.157539141 SPSLSPSPPS(ph)PLEKTPLGER ddPTM_A459_MK2206_30min_R1 2 SPSLSPSPPSPLEKTPLGER 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SPSLSPSPPS(1)PLEKTPLGER;SPS(0.001)LS(0.127)PS(0.093)PPS(0.777)PLEKT(0.001)PLGER 127.74 0.0001091 58182000 4748 4605.9 5249.8 7142.4 6702.7 3506.6 3019.8 6006.3 2363.16 1473.28 TRUE FALSE 4344.157667 4306.055073 4893.458203 7692.508886 6435.717266 3705.140662 2818.354652 5953.787552 2608.818939 1655.801049 2.623598813 2.600587236 2.955341891 4.645792977 3.886769651 2.237672614 1.702109474 3.595714325 1.575563042 1 10.69331362 -8.437411784 0.636156161 0.982966543 3.217912872 0.406267322 0.824100882 0.894464565 0.851235317 0.906375571 0.388785064 3.65E-09 8.437411784 2.234946329 SPSMAVPS(ph)PGWVASPK ddPTM_A459_MK2206_30min_R1 1 SPSMAVPSPGWVASPK 16 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 S(0.001)PS(0.003)MAVPS(0.996)PGWVASPK 160.03 5.72E-05 11947000 4114.2 3840.7 4060.6 3127.1 3701.1 3167.6 3555.1 3632.1 2990.6 3102.1 TRUE FALSE 3764.265685 3590.669732 3784.977785 3367.949784 3553.67735 3346.946775 3317.945766 3600.344933 3301.483572 3486.411568 1.079696304 1.029904147 1.085637112 0.966021859 1.019293701 0.959997611 0.951679313 1.032679264 0.946957497 1 11.76752717 -5.76456069 24.99999937 0.983064063 1.061561689 0.611943225 0.030137954 52.2740199 418691.0173 0.008015434 0.012484973 1.72E-06 5.76456069 0.078497626 SPSMAVPSPGWVAS(ph)PK ddPTM_A459_MK2206_30min_R2 1 SPSMAVPSPGWVASPK 16 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 SPSMAVPS(0.001)PGWVAS(0.999)PK 83.751 0.018012 5665100 34512 36643 37625 24268 33842 20537 32729 27152 25550 33453 TRUE FALSE 37154.26526 34823.3619 38879.39872 22285.22677 32513.19304 21318.54993 28431.64299 30700.85963 27772.29282 32361.43135 1.148103273 1.076076071 1.201411591 0.688635386 1.004689585 0.658764123 0.878565681 0.948686703 0.858191114 1 14.9819878 -5.747756623 24.99999561 0.858470984 1.13528495 0.563575343 0.112571276 165.095461 301646.1737 0.029057983 0.049990098 1.79E-06 5.747756623 0.276813966 SPSPGGPQLS(ph)PQLPR ddPTM_A459_MK2206_30min_R1 2 SPSPGGPQLSPQLPR 15 0 Q9HCH0;H7C1V4;Q9HCH0-2 Q9HCH0 NCKAP5L Nck-associated protein 5-like 1 SPSPGGPQLS(1)PQLPR;SPSPGGPQLS(1)PQLPR 201.75 1.48E-05 24122000 2099.1 2203.8 1730.44 1712.58 1942.53 2049.64 2218 1849.66 1797.45 1537.31 TRUE FALSE 1920.560522 2060.332219 1612.982554 1844.483208 1865.154917 2165.688846 2070.041267 1833.488618 1984.30136 1727.763569 1.111587579 1.192485046 0.933566712 1.067555331 1.079519762 1.253463659 1.198104477 1.06119185 1.148479685 1 10.75469009 SPSPGGPQLS(ph)PQLPR ddPTM_A459_MK2206_30min_R2 4 SPSPGGPQLSPQLPR 15 0 Q9HCH0;H7C1V4;Q9HCH0-2 Q9HCH0 NCKAP5L Nck-associated protein 5-like 1 SPSPGGPQLS(0.999)PQLPR;S(0.001)PS(0.001)PGGPQLS(0.998)PQLPR;SPSPGGPQLS(1)PQLPR;SPSPGGPQLS(1)PQLPR 164.58 9.34E-05 47111200 30012.6 42189.1 38333.3 50182.2 55403 53883 49965 38928 46536.6 45414 TRUE FALSE 32310.38773 40094.05064 39611.31309 46082.15374 53227.59984 55933.55532 43404.53548 44016.02326 50584.26935 43932.1449 0.735461194 0.912635855 0.901647602 1.048939309 1.21158664 1.273180616 0.987990356 1.001909271 1.151418158 1 15.42298932 -5.617540254 1.852375629 1.108372531 0.815097755 0.591810588 0.09628102 0.267207828 1.828805916 0.031289086 0.075544738 2.41E-06 5.617540254 -0.293274775 SPSPGPNHTS(ph)NSSNASNATVVPQNSSAR ddPTM_A459_MK2206_30min_R1 1 SPSPGPNHTSNSSNASNATVVPQNSSAR 28 0 Q9BTA9-5;Q9BTA9;A0A0A0MRT2;Q9BTA9-2 Q9BTA9-5 WAC WW domain-containing adapter protein with coiled-coil 1 S(0.002)PS(0.001)PGPNHT(0.342)S(0.442)NS(0.15)S(0.052)NAS(0.011)NATVVPQNSSAR 57.902 0.0040848 4577200 234.53 180.14 209.03 179.21 386.96 350.68 344.92 285.68 225.43 127.19 TRUE FALSE 214.5819919 168.4128533 194.841626 193.0127853 371.5465638 370.5351985 321.9110161 283.1823299 248.8642552 142.9472574 1.50112703 1.178146795 1.363031579 1.350237764 2.599186375 2.592111281 2.251956574 1.981026673 1.740951591 1 7.159339131 -6.230718337 21.2991396 2.116039358 1.337056291 0.353871734 0.440003661 111.0618163 76998.96853 0.129012863 0.166504873 5.88E-07 6.230718337 -0.778983068 SPSPPDGS(ph)PAATPEIR ddPTM_A459_MK2206_30min_R1 1 SPSPPDGSPAATPEIR 16 0 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 S(0.013)PS(0.08)PPDGS(0.907)PAATPEIR 183.36 8.74E-07 4938100 815.2 819.49 904.13 745.36 884.19 943.24 1118.3 817.97 748.14 937.78 TRUE FALSE 745.8629592 766.1410521 842.7601747 802.7677563 848.97084 996.6454337 1043.700247 810.8185745 825.9118302 1053.959266 0.707677216 0.726917137 0.799613611 0.761668674 0.805506311 0.945620448 0.990266209 0.769307316 0.783627847 1 10.0416034 -6.547576376 4.441442691 0.889005845 0.753570552 0.465613871 0.075106142 0.216421107 10.23684949 0.026814238 0.027721291 2.83E-07 6.547576376 -0.135435293 SPSPPDGS(ph)PAATPEIR ddPTM_A459_MK2206_30min_R2 2 SPSPPDGSPAATPEIR 16 0 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 SPSPPDGS(0.999)PAATPEIR;S(0.057)PS(0.41)PPDGS(0.531)PAAT(0.002)PEIR 183.73 8.56E-07 26384000 29466 38250 35676 46804 37509 44732 40277 33383 40173 38455 TRUE FALSE 31721.93962 36350.56062 36865.42003 42979.96348 36036.20819 46434.30761 34988.58152 37746.27272 43667.17492 37200.2165 0.852735349 0.977159921 0.991000147 1.155368638 0.968709636 1.248226811 0.940547793 1.014678845 1.173841957 1 15.1830234 -4.838719899 1.32226418 1.068781557 0.77956844 0.331948109 0.094122423 1.388553509 2.316812247 0.026834649 0.530418921 1.45E-05 4.838719899 -0.289213116 SPSPPLPT(ph)HIPPEPPRT(ph)PPFPAK ddPTM_A459_MK2206_30min_R2 1 SPSPPLPTHIPPEPPRTPPFPAK 23 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 2 S(0.097)PS(0.129)PPLPT(0.779)HIPPEPPRT(0.995)PPFPAK 75.703 0.0012097 6953300 40397 48909 41047 52230 46196 50591 47706 39789 44205 46087 TRUE FALSE 43489.82538 46480.25018 42415.48649 47962.64192 44382.11292 52516.27596 41442.14489 44989.55892 48049.871 44583.18496 0.975475965 1.042551137 0.951378564 1.075801156 0.995489958 1.177939082 0.92954653 1.00911496 1.077757702 1 15.44421206 -5.766154921 24.9999517 1.037876607 0.995076816 0.100157385 0.065565023 310.5597614 1646474.032 0.017944097 0.027637372 1.71E-06 5.766154921 -0.042799791 SPSPPT(ph)QHTGQPPGQPSAPSQLSAPR ddPTM_A459_MK2206_30min_R1 2 SPSPPTQHTGQPPGQPSAPSQLSAPR 26 0 Q68EM7-5;Q68EM7-3;Q68EM7-6;Q68EM7;Q68EM7-7;Q68EM7-2;I3L460 Q68EM7-5 ARHGAP17 Rho GTPase-activating protein 17 1 S(0.009)PS(0.009)PPT(0.965)QHT(0.016)GQPPGQPSAPSQLSAPR;S(0.091)PS(0.091)PPT(0.758)QHT(0.06)GQPPGQPSAPSQLSAPR 115.83 1.06E-08 214900000 861.25 510.85 783.15 590.13 1307.44 1032.84 1016.71 1093.51 670.94 438.33 TRUE FALSE 787.9961649 477.5935721 729.99196 635.5819149 1255.361896 1091.318508 948.887131 1083.949557 740.686614 492.6336296 1.599558206 0.969470096 1.481815118 1.290171593 2.548266746 2.215274075 1.926151756 2.200315797 1.503524261 1 8.944371307 -6.220140783 24.76522501 1.976117069 1.31959472 0.28269669 0.429139787 493.9206399 296185.4862 0.121084813 0.156317987 6.02E-07 6.220140783 -0.656522349 SPSPPT(ph)QHTGQPPGQPSAPSQLSAPR ddPTM_A459_MK2206_30min_R2 5 SPSPPTQHTGQPPGQPSAPSQLSAPR 26 0 Q68EM7-5;Q68EM7-3;Q68EM7-6;Q68EM7;Q68EM7-7;Q68EM7-2;I3L460 Q68EM7-5 ARHGAP17 Rho GTPase-activating protein 17 1 S(0.068)PS(0.056)PPT(0.875)QHT(0.001)GQPPGQPSAPSQLSAPR;S(0.187)PS(0.054)PPT(0.759)QHT(0.001)GQPPGQPSAPSQLSAPR;S(0.196)PS(0.196)PPT(0.544)QHT(0.064)GQPPGQPSAPSQLSAPR;S(0.003)PS(0.012)PPT(0.725)QHT(0.26)GQPPGQPSAPSQLSAPR;S(0.232)PS(0.232)PPT(0.486)QHT(0.049)GQPPGQPSAPSQLSAPR 133.51 6.92E-09 479243200 107397.38 199341.4 145612.74 187765.4 170081.1 178240.1 181137.9 150250.16 147408.28 144671.1 TRUE FALSE 115619.806 189442.3959 150467.3961 172424.3662 163402.8614 185023.1519 157354.2761 169888.3718 160229.5857 139950.4939 0.826147896 1.353638638 1.075147303 1.232038283 1.167576169 1.322061443 1.124356705 1.21391763 1.144901896 1 17.09455705 -4.744361828 24.98780457 1.188625356 0.82614681 0.524805661 0.10124281 762.3500907 1115408.027 0.022817684 0.654746593 1.80E-05 4.744361828 -0.362478547 SPSPPTQHT(ph)GQPPGQPSAPSQLSAPR ddPTM_A459_MK2206_30min_R2 1 SPSPPTQHTGQPPGQPSAPSQLSAPR 26 0 Q68EM7-5;Q68EM7-3;Q68EM7-6;Q68EM7;Q68EM7-7;Q68EM7-2;I3L460 Q68EM7-5 ARHGAP17 Rho GTPase-activating protein 17 1 S(0.006)PS(0.006)PPT(0.114)QHT(0.875)GQPPGQPSAPSQLSAPR 106.02 4.58E-08 4037700 2322.6 3507 3099.8 6504.7 5819.3 5258.3 5752.3 6387.4 5085.9 5137 TRUE FALSE 2500.420042 3332.84748 3203.145785 5973.245202 5590.805042 5458.408291 4997.0161 7222.255111 5528.262389 4969.380111 0.503165382 0.670676705 0.644576529 1.202010124 1.125050795 1.098408286 1.005561255 1.453351314 1.11246519 1 12.27885018 -5.744994969 8.619939194 1.153194214 0.61105746 0.790881884 0.126278533 0.078938941 32.59431131 0.03468392 0.058097307 1.80E-06 5.744994969 -0.542136754 SPSQPGQSGLCGVAAAAT(ph)GHTPPLAEAPK ddPTM_A459_MK2206_30min_R2 1 SPSQPGQSGLCGVAAAATGHTPPLAEAPK 29 0 Q6AWC2-3;Q6AWC2-2;Q6AWC2-4;Q6AWC2;Q6AWC2-6;Q6AWC2-5 Q6AWC2-3 WWC2 Protein WWC2 1 SPSQPGQSGLCGVAAAAT(0.607)GHT(0.393)PPLAEAPK 66.98 0.00074303 5185200 20287 17047 24962 24535 25826 24188 27407 20273 23624 27752 TRUE FALSE 21840.18832 16200.47077 25794.22062 22530.41202 24811.94147 25108.49129 23808.42798 22922.75071 25678.77282 26846.45451 0.813522259 0.603449173 0.96080548 0.839232309 0.924216695 0.93526284 0.886836955 0.853846481 0.95650518 1 14.71244395 -5.27117102 24.99258908 0.911054043 0.708485712 0.614878914 0.066554202 362.0338228 929768.7504 0.016083195 0.03415582 5.36E-06 5.27117102 -0.202568331 SPSS(ph)DLDTDAEGDDFELLDQSELSQLDPASSR ddPTM_A459_MK2206_30min_R1 2 SPSSDLDTDAEGDDFELLDQSELSQLDPASSR 32 0 K7EQI9;Q86VR2-2;Q86VR2 K7EQI9 FAM134C Protein FAM134C 1 S(0.147)PS(0.147)S(0.706)DLDTDAEGDDFELLDQSELSQLDPASSR;S(0.167)PS(0.167)S(0.665)DLDTDAEGDDFELLDQSELSQLDPASSR 273.39 4.63E-96 7108000 297.22 0 112.53 205.339 145.79 188.161 157.81 214.62 60.535 0 TRUE FALSE 271.9398782 0 104.8917771 221.1542454 139.9828756 198.8145132 147.2827828 212.7436 66.82782988 0 0 SPSTTRPT(ph)SPTSLCTLLSK ddPTM_A459_MK2206_30min_R1 1 SPSTTRPTSPTSLCTLLSK 19 1 P46934-3;P46934-2;P46934;H0YA37 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 S(0.001)PS(0.004)T(0.004)T(0.004)RPT(0.469)S(0.469)PT(0.026)S(0.021)LCTLLSK 65.47 0.033137 6979800 1352.5 1203.3 1636.1 1572.2 1531.4 1509.1 1749.5 1618.1 993.65 1285.3 TRUE FALSE 1237.462773 1124.964951 1525.04609 1693.291116 1470.401095 1594.543938 1632.794047 1603.953122 1096.943473 1444.532668 0.856652674 0.778774324 1.055736658 1.17220687 1.017907818 1.103847614 1.130326841 1.110361267 0.759376024 1 10.49638711 -5.267392359 24.52255865 1.056569284 0.817713491 0.401229237 0.109541266 304.9792689 1256330.663 0.028290224 0.061528004 5.40E-06 5.267392359 -0.238855793 SPSTTYLHT(ph)PTPSEDAAIPSK ddPTM_A459_MK2206_30min_R1 1 SPSTTYLHTPTPSEDAAIPSK 21 0 Q13111 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 S(0.027)PS(0.019)T(0.019)T(0.019)Y(0.013)LHT(0.901)PT(0.001)PSEDAAIPSK 91.589 0.00088358 41613000 6512.8 5850.4 5705.8 4289.8 5624.5 5172.8 6517.5 5072 5018.7 5408.1 TRUE FALSE 5958.85216 5469.537897 5318.506193 4620.201139 5400.464255 5465.679466 6082.729467 5027.656039 5540.411825 6078.096257 0.980381341 0.899876814 0.875028293 0.760139515 0.88851246 0.899242005 1.00076228 0.827176113 0.911537361 1 12.56940381 -6.869848487 3.936689561 0.923612701 0.874791154 0.109261442 0.068179083 0.595349657 17.14914362 0.025889646 0.022825654 1.35E-07 6.869848487 -0.048821546 SPSVPKS(ph)PTPK ddPTM_A459_MK2206_30min_R1 1 SPSVPKSPTPK 11 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 S(0.001)PS(0.002)VPKS(0.978)PT(0.018)PK 72.209 0.033668 96400000 5388.9 6069.6 5810.3 4780.4 3351.9 3494.5 5061 3820.5 6044.3 5710.8 TRUE FALSE 4930.545757 5674.467937 5415.913024 5148.587236 3218.386725 3692.35557 4723.389924 3787.097771 6672.626615 6418.297018 0.768201556 0.884108031 0.843823994 0.802173415 0.501439356 0.575285868 0.735925731 0.590047136 1.039625713 1 12.64797484 -10.29321484 7.927214974 1.000000085 0.739844422 0.193993138 0.152496777 2.22E-10 0 0.153365964 0.03719671 5.09E-11 10.29321484 -0.260155663 SPSVPKS(ph)PTPK ddPTM_A459_MK2206_30min_R2 1 SPSVPKSPTPK 11 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 SPSVPKS(0.899)PT(0.1)PK 79.804 0.024741 299050000 634000 548190 490180 437100 376610 233560 479140 385940 274040 447950 TRUE FALSE 682539.5275 520967.6817 506522.3565 401387.5318 361822.3991 242448.2895 416228.3424 436383.6831 297875.5038 433333.4282 1.575090872 1.202232849 1.16889749 0.926278717 0.834974584 0.55949593 0.960526734 1.007039048 0.687404858 1 18.72511801 -5.005106821 0.943721973 0.834333928 1.765049684 0.723172833 0.14172519 0.832464598 0.746165653 0.051398258 0.737505499 9.88E-06 5.005106821 0.930715756 SPT(ph)GPSNSFLANMGGTVAHK ddPTM_A459_MK2206_30min_R1 4 SPTGPSNSFLANMGGTVAHK 20 0 H0Y6J6;Q5W012;Q96I25 H0Y6J6 RBM17 Splicing factor 45 1 S(0.414)PT(0.542)GPS(0.031)NS(0.013)FLANMGGTVAHK;S(0.406)PT(0.545)GPS(0.048)NS(0.001)FLANMGGTVAHK;S(0.269)PT(0.332)GPS(0.332)NS(0.067)FLANMGGTVAHK;S(0.184)PT(0.784)GPS(0.032)NSFLANMGGTVAHK 185.09 3.08E-14 596138000 10835.3 10301.5 10066.5 8249.4 10421.4 10539.5 12529.5 9022.2 10478.2 11736 TRUE FALSE 9913.700837 9630.870478 9383.214027 8884.770217 10006.29357 11136.23738 11693.67992 8943.319857 11567.44639 13189.94428 0.751610517 0.730167639 0.711391483 0.673601801 0.758630465 0.84429753 0.886560221 0.678040761 0.876989784 1 13.68715085 -6.628499081 3.880018628 0.838792429 0.717032323 0.422367562 0.076843756 0.254310236 7.201075911 0.025717468 0.025670504 2.35E-07 6.628499081 -0.121760107 SPT(ph)GPSNSFLANMGGTVAHK ddPTM_A459_MK2206_30min_R2 2 SPTGPSNSFLANMGGTVAHK 20 0 H0Y6J6;Q5W012;Q96I25 H0Y6J6 RBM17 Splicing factor 45 1 S(0.142)PT(0.848)GPS(0.008)NS(0.002)FLANMGGTVAHK;S(0.388)PT(0.542)GPS(0.066)NS(0.005)FLANMGGTVAHK 183.1 1.63E-13 540740000 402376 427647 412495 497486 419518 414226 493151 401338 374421 481581 TRUE FALSE 433182.2159 406410.6718 426247.3774 456839.8024 403045.6154 429989.6607 428399.6813 453794.2546 406987.4618 465867.0514 0.929840852 0.872374791 0.914954977 0.980622693 0.86515158 0.92298792 0.919574973 0.974085317 0.873612891 1 18.82955877 -14.52287875 0.290880752 1.637524074 0.913382388 0.292227503 0.037883304 318.0499805 2.989949769 123.1856415 0.039157245 3.00E-15 14.52287875 -0.724141686 SPT(ph)MEQAVQTASAHLPAPAAVGR ddPTM_A459_MK2206_30min_R1 1 SPTMEQAVQTASAHLPAPAAVGR 23 0 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 S(0.473)PT(0.527)MEQAVQTASAHLPAPAAVGR 108.69 2.85E-05 16124000 592.99 744.51 595.69 515.98 523.03 564.31 583.97 511.25 539.26 324.09 TRUE FALSE 542.5530866 696.0422637 555.2562225 555.720869 502.1966076 596.2607445 545.0144268 506.7801952 595.3180068 364.240716 1.48954541 1.910940302 1.524421071 1.525696729 1.378749232 1.63699641 1.496302865 1.391333184 1.634408183 1 8.50874839 -12.54177889 0.207544616 2.14E-12 1.65321092 0.573884091 0.143548583 41.18149734 0.853570428 18.65997667 0.334098987 2.87E-13 12.54177889 1.65321092 SPT(ph)MEQAVQTASAHLPAPAAVGR ddPTM_A459_MK2206_30min_R2 1 SPTMEQAVQTASAHLPAPAAVGR 23 0 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 S(0.277)PT(0.723)MEQAVQTASAHLPAPAAVGR 96.467 0.0001153 7899300 13672 13727 12576 13504 10839 12761 19037 12459 13025 17588 TRUE FALSE 14718.73883 13045.33714 12995.27756 12400.68 10413.4064 13246.6288 16537.41903 14087.43408 14157.89096 17014.105 0.865090396 0.766736607 0.763794367 0.728847036 0.6120455 0.778567477 0.971982895 0.827985608 0.832126695 1 14.05444364 -7.084713386 6.841606127 0.89246191 0.743210131 0.494771205 0.076795544 0.243342922 16.72369691 0.030331335 0.023520841 8.23E-08 7.084713386 -0.149251779 SPT(ph)PPPTLHLVPEPAAPPPPPPR ddPTM_A459_MK2206_30min_R2 1 SPTPPPTLHLVPEPAAPPPPPPR 23 0 A0A087WWH3;Q9NZM4-2;Q9NZM4 A0A087WWH3 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein 1 S(0.424)PT(0.497)PPPT(0.079)LHLVPEPAAPPPPPPR 66.075 0.0055745 9606300 22258 16547 19421 21448 17774 18631 19782 19419 13894 20018 TRUE FALSE 23962.08959 15725.30004 20068.48645 19695.62979 17076.10345 19340.01576 17184.59964 21957.12998 15102.47501 19364.8143 1.237403531 0.812055298 1.036337666 1.017083329 0.881810855 0.998719402 0.887413603 1.133867314 0.779892581 1 14.24115005 -4.741759809 24.97615078 0.956149145 1.237404507 0.408032715 0.103702576 1349.184385 1712215.909 0.02360189 0.907573089 1.81E-05 4.741759809 0.281255362 SPT(ph)SPLNMK ddPTM_A459_MK2206_30min_R1 1 SPTSPLNMK 9 0 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 S(0.008)PT(0.897)S(0.095)PLNMK 115.91 0.018745 57872000 8168.1 8141.5 7568 6949.2 7602.5 6852.5 7033.8 7210.1 6340.2 6113.5 TRUE FALSE 7473.360203 7611.48687 7054.305246 7484.428588 7299.676326 7240.482628 6564.588036 7147.062856 6999.286479 6870.886535 1.087684997 1.107788177 1.026695057 1.089295908 1.062406764 1.053791617 0.955420818 1.040195151 1.018687537 1 12.74628054 -7.045942889 7.984772587 1.006441988 1.073164412 0.589572171 0.028071908 0.233189586 37.09353686 0.010664096 0.008334572 9.00E-08 7.045942889 0.066722424 SPT(ph)SPLNMK ddPTM_A459_MK2206_30min_R2 3 SPTSPLNMK 9 0 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 S(0.008)PT(0.806)S(0.187)PLNMK;S(0.171)PT(0.781)S(0.048)PLNMK;S(0.008)PT(0.709)S(0.283)PLNMK 123.62 0.013025 139504000 919530 1139327 1113460 1130858 1083518 953208 1240998 930785 893829 1086478 TRUE FALSE 989929.9238 1082749.678 1150582.201 1038463.284 1040973.639 989482.9984 1078053.472 1052441.795 971572.6307 1051026.312 0.941869783 1.030183227 1.094722547 0.988046895 0.990435375 0.941444555 1.025715018 1.001346763 0.924403718 1 20.00336736 -5.968933186 24.99988401 0.981682894 1.026106623 0.151079032 0.044111512 358.1564455 288211.1105 0.012560485 0.018630016 1.07E-06 5.968933186 0.044423729 SPTAALNES(ph)LVECPK ddPTM_A459_MK2206_30min_R1 4 SPTAALNESLVECPK 15 0 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 SPTAALNES(1)LVECPK;SPTAALNES(1)LVECPK;SPTAALNES(1)LVECPK;SPTAALNES(1)LVECPK 205.78 5.75E-09 16223900 8491.8 7639.5 7375.3 6766.3 7065.4 5862.66 6594.3 6935.4 6085.73 6065.17 TRUE FALSE 7769.527818 7142.167161 6874.685185 7287.441598 6783.970157 6194.598743 6154.406279 6874.764529 6718.363411 6816.569049 1.139800354 1.047765688 1.008525717 1.069077647 0.995217698 0.908756106 0.902859816 1.008537356 0.985593099 1 12.73483006 -4.160357328 0.551905081 0.962849855 1.385598834 0.589738075 0.042630587 5.817454021 0.813206204 0.024995121 1.830624716 6.91E-05 4.160357328 0.422748979 SPTAALNES(ph)LVECPK ddPTM_A459_MK2206_30min_R2 2 SPTAALNESLVECPK 15 0 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 SPTAALNES(1)LVECPK;SPTAALNES(1)LVECPK 189.81 2.67E-05 14082300 53583 58131 50701 55413 65152 50418 62989 51535 53574 61908 TRUE FALSE 57685.35568 55244.29907 52391.34603 50885.58064 62593.80512 52336.69232 54718.46864 58270.80145 58233.76968 59887.94703 0.963221458 0.92246106 0.874822876 0.84967983 1.045182014 0.873910276 0.913680821 0.972997144 0.972378794 1 15.86997806 -7.810177566 5.244634305 0.981207039 0.918989508 0.225959159 0.052123759 0.317044052 19.01985978 0.02932465 0.014033688 1.55E-08 7.810177566 -0.062217532 SPTAPSVFS(ph)PTGNR ddPTM_A459_MK2206_30min_R1 1 SPTAPSVFSPTGNR 14 0 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4 H0Y3X6 NELFA Negative elongation factor A 1 SPTAPS(0.02)VFS(0.917)PT(0.063)GNR 99.834 0.01417 0 780.75 730.25 769.6 571.58 876.87 838.21 799.02 723.73 794.04 704.81 TRUE FALSE 714.3431126 682.7105923 717.3616962 615.6031906 841.9424111 885.6687258 745.7188337 717.4025049 876.5832995 792.1271838 0.901803558 0.86186992 0.905614289 0.777151956 1.062887915 1.118089044 0.941413007 0.905665807 1.106619388 1 9.629588278 -6.271486225 24.96785621 1.01845967 0.864771668 0.556364458 0.070282677 564.4689297 1402783.875 0.022629627 0.025948146 5.35E-07 6.271486225 -0.153688001 SPTAPSVFS(ph)PTGNR ddPTM_A459_MK2206_30min_R2 2 SPTAPSVFSPTGNR 14 0 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4 H0Y3X6 NELFA Negative elongation factor A 1 SPTAPS(0.001)VFS(0.716)PT(0.283)GNR;SPTAPS(0.001)VFS(0.726)PT(0.273)GNR 174.24 8.95E-05 32989000 30856 44667 37070 39238 40958 44305 45762 40018 39725 44730 TRUE FALSE 33218.35908 42448.90173 38305.8953 36032.12988 39349.78312 45991.05782 39753.39443 45248.49 43180.20869 43270.46376 0.767691312 0.98101333 0.885266576 0.832718828 0.909391296 1.06287416 0.918718936 1.045713082 0.997914164 1 15.40109496 -6.596256107 6.307058551 1.001963498 0.875514442 0.536560509 0.061077213 0.172043939 11.52684526 0.01949491 0.019506461 2.53E-07 6.596256107 -0.126449056 SPTLS(ph)QVHSPLVTSPSANLK ddPTM_A459_MK2206_30min_R2 1 SPTLSQVHSPLVTSPSANLK 20 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 S(0.105)PT(0.105)LS(0.417)QVHS(0.369)PLVT(0.005)SPSANLK 90.442 0.0011176 32647000 23471 24503 25778 35259 23239 28570 35423 23606 21683 30459 TRUE FALSE 25267.95781 23286.21665 26637.42565 32378.22691 22326.52009 29657.25137 30771.91755 26691.38525 23568.94815 29465.12532 0.857554737 0.79029756 0.904032322 1.098866085 0.757726969 1.006520456 1.044350472 0.905863625 0.799893022 1 14.84672078 -5.512168062 24.63446756 0.944500831 0.829735814 0.185230609 0.100171438 691.5202808 1590486.507 0.026690988 0.050441271 3.07E-06 5.512168062 -0.114765017 SPTLSQVHS(ph)PLVTSPSANLK ddPTM_A459_MK2206_30min_R1 1 SPTLSQVHSPLVTSPSANLK 20 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 SPTLS(0.001)QVHS(0.999)PLVTSPSANLK 101.92 0.00044443 7713900 1426.4 1099.8 1214.6 892.41 1522.9 1402.2 1347.7 1392.8 998.84 996.77 TRUE FALSE 1305.07719 1028.20282 1132.156336 961.1435728 1462.239668 1481.591352 1257.797392 1380.622896 1102.672992 1120.257393 1.164979761 0.917827302 1.010621615 0.857966731 1.305271161 1.322545481 1.122775355 1.232415787 0.98430325 1 10.12961453 -6.261478586 25 1.178983485 0.984473941 0.296921949 0.128926491 4.136532343 2637241.431 0.038612929 0.046679846 5.48E-07 6.261478586 -0.194509543 SPTLSQVHS(ph)PLVTSPSANLK ddPTM_A459_MK2206_30min_R2 2 SPTLSQVHSPLVTSPSANLK 20 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 SPTLS(0.001)QVHS(0.999)PLVTSPSANLK;SPT(0.001)LS(0.002)QVHS(0.997)PLVTSPSANLK 146.34 1.61E-05 12303600 26092 52422 36031 60344 54940 61090 62487 45227 52012 50677 TRUE FALSE 28089.62358 49818.79971 37232.25556 55413.70217 52782.77955 63414.82276 54282.38184 51138.32419 56535.90974 49023.41364 0.572983836 1.016224616 0.759479049 1.130351766 1.076685111 1.293561954 1.107274623 1.043140826 1.153243023 1 15.58118333 -4.339059724 0.703123132 1.125369082 5.72E-10 0.612414449 0.122000306 3.48144484 0.841845319 0.049495059 3.588528521 4.58E-05 4.339059724 -1.125369081 SPTS(ph)PLNMK ddPTM_A459_MK2206_30min_R1 1 SPTSPLNMK 9 0 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 SPT(0.045)S(0.955)PLNMK 139.31 0.0023913 9419200 5272.8 5515.8 5481.4 4712.7 5824.6 5234.9 5783.4 4860.1 5115 5143.3 TRUE FALSE 4824.320671 5156.720417 5109.33784 5075.672971 5592.593848 5531.295514 5397.599938 4817.608658 5646.722554 5780.490834 0.834586683 0.892090406 0.883893425 0.878069547 0.967494631 0.956890284 0.933761525 0.833425534 0.976858664 1 12.49697628 -1.522878745 0.104717174 1.017491616 0.550016127 0.419445493 0.043025059 141.9866391 1.05037294 0.501480931 9.554887154 0.03 1.522878745 -0.467475489 SPTTVLFTSS(ph)PIK ddPTM_A459_MK2206_30min_R2 2 SPTTVLFTSSPIK 13 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 SPTTVLFT(0.069)S(0.069)S(0.862)PIK;SPTTVLFTS(0.065)S(0.934)PIK 253.97 2.66E-23 17917400 131998 119592 110708 122421 126874 101668 147656 107624 103870 128131 TRUE FALSE 142103.8684 113653.2352 114398.9495 112418.8127 121892.2893 105537.047 128268.5898 121690.8263 112904.4248 123950.096 1.146460334 0.916927367 0.922943614 0.906968339 0.983398103 0.851447884 1.034840585 0.981772748 0.910886143 1 16.91939986 -4.756759727 25 0.94402892 1.146460639 0.577596944 0.051552227 101.3979807 541630.7642 0.012506943 0.098371189 1.75E-05 4.756759727 0.202431719 SPVAEEPGGGGSSSSEAKLS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SPVAEEPGGGGSSSSEAKLSPR 22 1 Q7L8J4 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 SPVAEEPGGGGS(0.002)S(0.005)S(0.026)S(0.029)EAKLS(0.938)PR 53.097 0.018661 9826300 10709 14978 14286 12412 12771 11259 13379 10898 11395 16848 TRUE FALSE 11528.88927 14234.2143 14762.28811 11397.8999 12269.54637 11687.46913 11622.32123 12322.40602 12386.1165 16298.25114 0.707369716 0.873358385 0.905759028 0.699332695 0.752813677 0.717099585 0.713102352 0.756056948 0.759965986 1 13.99242955 -10.82579964 3.050847704 1.001739414 0.766826404 0.527716208 0.066678534 16226015.17 21260211.95 257955.2973 0.01783562 1.49E-11 10.82579964 -0.23491301 SPVDIVTGGIS(ph)PVRDLDR ddPTM_A459_MK2206_30min_R2 1 SPVDIVTGGISPVRDLDR 18 1 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494BZW2;H0Y9N9;H0YAC6 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 SPVDIVTGGIS(1)PVRDLDR 80.016 0.0063882 1367500 3226.5 6133 4467.3 5978 6600.4 5202.8 6312.8 3720.6 5142.9 5029.9 TRUE FALSE 3473.523321 5828.444138 4616.237552 5489.578277 6341.235132 5400.7962 5483.921777 4206.895195 5590.220146 4865.774775 0.713868496 1.197845031 0.94871583 1.128202297 1.303232358 1.10995606 1.127039789 0.864588969 1.148885923 1 12.24845383 -4.751534151 24.98691746 1.092722939 0.713867727 0.474355847 0.119429188 371.6985643 937581.5406 0.030197706 0.395408073 1.77E-05 4.751534151 -0.378855213 SPVGKS(ph)PPSTGSTYGSSQK ddPTM_A459_MK2206_30min_R1 2 SPVGKSPPSTGSTYGSSQK 19 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.003)PVGKS(0.673)PPS(0.256)T(0.025)GS(0.002)T(0.008)YGS(0.006)S(0.026)QK;S(0.002)PVGKS(0.995)PPS(0.003)T(0.001)GSTYGSSQK 96.561 0.00089322 65179000 5143.2 5430.6 5391.3 4195.2 4291.3 4421.4 5035.6 4133.8 4947.1 4702.7 TRUE FALSE 4705.743832 5077.066953 5025.353577 4518.315031 4120.368434 4671.735847 4699.684312 4097.658622 5461.368748 5285.30598 0.890344637 0.960600384 0.950816016 0.854882394 0.779589384 0.883910197 0.889198152 0.775292601 1.033311746 1 12.36777128 -8.285278558 24.96511959 1.016655934 0.875763258 0.49474682 0.057986517 810.6448401 848923.4197 0.060004404 0.015525652 5.18E-09 8.285278558 -0.140892676 SPVGKS(ph)PPSTGSTYGSSQK ddPTM_A459_MK2206_30min_R2 2 SPVGKSPPSTGSTYGSSQK 19 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.046)PVGKS(0.954)PPSTGSTYGSSQK;S(0.001)PVGKS(0.994)PPS(0.002)T(0.001)GS(0.001)T(0.001)YGSSQK 84.581 0.0021923 122890000 130110 143325 131574 153907 146576 112354 160527 129407 89047 140812 TRUE FALSE 140071.3216 136207.6889 135960.6115 141332.3058 140820.6898 116629.7102 139449.6121 146320.9392 96792.1471 136217.316 1.028293067 0.999929326 0.998115478 1.037550217 1.033794336 0.856203261 1.023728966 1.074172826 0.710571534 1 17.05555059 -8.242368883 24.98936514 0.8552857 1.003489466 0.337286491 0.084686914 770.9066177 1010174.986 0.054492855 0.020526342 5.72E-09 8.242368883 0.148203766 SPVGS(ph)GAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK ddPTM_A459_MK2206_30min_R2 2 SPVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK 51 0 P16989-2;P16989;P16989-3 P16989-2 YBX3 Y-box-binding protein 3 1 S(0.48)PVGS(0.52)GAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK;S(0.482)PVGS(0.515)GAPQAAAPAPAAHVAGNPGGDAAPAAT(0.001)GT(0.001)AAAAS(0.001)LAT(0.001)AAGSEDAEK 67.295 6.72E-11 28967700 96872 61409 80182 72943 63299 49452 86143 63216 46105 84847 TRUE FALSE 104288.5948 58359.51836 82855.22786 66983.32357 60813.56321 51333.93051 74832.32062 71478.54825 50115.12956 82078.44934 1.270596553 0.71102121 1.009463855 0.816089048 0.740919982 0.625425199 0.911717037 0.870856465 0.610575979 1 16.32471585 -4.75402541 24.99735734 0.80820868 1.270597369 0.516123 0.133577731 213.6743105 720376.0574 0.032485655 0.329861287 1.76E-05 4.75402541 0.462388689 SPVLSNTTTEPASTMS(ph)PPPAKK ddPTM_A459_MK2206_30min_R2 1 SPVLSNTTTEPASTMSPPPAKK 22 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 SPVLSNTTTEPAS(0.131)T(0.151)MS(0.718)PPPAKK 81.055 0.0040418 0 19621 29206 24638 31192 30782 26008 29536 17385 26412 28175 TRUE FALSE 21123.19885 27755.67251 25459.41862 28643.51382 29573.34401 26997.75266 25657.88772 19657.27919 28709.26802 27255.65206 0.775002513 1.018345569 0.934096846 1.050920145 1.085035278 0.990537765 0.941378605 0.721218452 1.053332643 1 14.73426781 -10.1096006 11.46954061 0.999996602 0.95444518 0.015381815 0.113448237 0 0 0.111358611 0.02700843 7.77E-11 10.1096006 -0.045551422 SPVPSLRPS(ph)STGPSPSGGLSEEPAAK ddPTM_A459_MK2206_30min_R2 1 SPVPSLRPSSTGPSPSGGLSEEPAAK 26 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 SPVPS(0.071)LRPS(0.464)S(0.377)T(0.086)GPS(0.001)PS(0.001)GGLS(0.001)EEPAAK 64.028 0.045241 0 6731.7 7004.2 4355.7 6877 8519.8 4293.8 6787.7 5402.5 6591.5 7597.2 TRUE FALSE 7247.084128 6656.381613 4500.916864 6315.127102 8185.269843 4457.203568 5896.466837 6108.6253 7164.816755 7349.303986 0.986091219 0.905715919 0.612427636 0.859282337 1.113747623 0.606479685 0.802316362 0.831184193 0.974897319 1 12.84339191 -8.298770792 4.651636248 0.994962307 0.83475406 0.143058276 0.14461618 0.41621334 21.18427132 0.134555417 0.037251529 5.03E-09 8.298770792 -0.160208247 SPVPSPGS(ph)SSPQLQVK ddPTM_A459_MK2206_30min_R1 1 SPVPSPGSSSPQLQVK 16 0 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 SPVPSPGS(0.333)S(0.333)S(0.333)PQLQVK 116.9 0.0018841 21815000 3585.4 3256 3643.9 2979 3503 3351.9 4152.6 3397.2 3711.2 3237.8 TRUE FALSE 3280.442902 3044.033808 3396.56222 3208.443096 3363.468092 3541.681681 3875.587631 3367.498639 4096.992521 3638.923108 0.901487282 0.836520508 0.933397634 0.881701262 0.92430315 0.973277416 1.065036967 0.925410771 1.125880487 1 11.82929585 -6.788477428 1.832727467 1.024498108 0.887055144 0.592204071 0.052735458 0.237867255 1.649200464 0.020723573 0.018585728 1.63E-07 6.788477428 -0.137442963 SPVPSPGS(ph)SSPQLQVK ddPTM_A459_MK2206_30min_R2 3 SPVPSPGSSSPQLQVK 16 0 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 SPVPSPGS(0.817)S(0.092)S(0.092)PQLQVK;SPVPSPGS(0.647)S(0.082)S(0.271)PQLQVK;SPVPS(0.002)PGS(0.936)S(0.012)S(0.049)PQLQVK 182.7 9.06E-07 69149000 196622 221233 211295 239739 235186 196584 260840 211556 208610 237071 TRUE FALSE 211675.5315 210246.8909 218339.4698 220151.5568 225951.4159 204065.1419 226591.3947 239207.0956 226754.5207 229335.3927 0.922995483 0.916766001 0.952053093 0.959954564 0.98524442 0.889810942 0.988035 1.04304483 0.988746299 1 17.80709949 -7.511079033 24.21809921 1.012645332 0.940514058 0.594341695 0.027583985 259.94637 533526.6943 0.012145672 0.007667333 3.08E-08 7.511079033 -0.072131274 SPVPSPGSSS(ph)PQLQVK ddPTM_A459_MK2206_30min_R1 1 SPVPSPGSSSPQLQVK 16 0 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 SPVPS(0.005)PGS(0.184)S(0.184)S(0.628)PQLQVK 231.41 2.31E-15 19243000 3571.1 3809.5 3787.6 3427 3716.2 3643.2 4069.7 3311.8 3816.6 3829.4 TRUE FALSE 3267.359192 3561.500858 3530.508265 3690.948134 3568.175885 3849.474836 3798.217739 3282.845282 4213.349228 4303.814982 0.759177429 0.827521832 0.820320641 0.857599165 0.829072788 0.89443316 0.882523471 0.762775653 0.978980101 1 12.07140034 -14.52287875 0.07586292 1.546343358 0.669204935 0.564016862 0.050564233 211.7744813 1.141435266 19.47224433 2.036162198 3.00E-15 14.52287875 -0.877138424 SPVPSPGSSS(ph)PQLQVK ddPTM_A459_MK2206_30min_R2 1 SPVPSPGSSSPQLQVK 16 0 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 SPVPSPGS(0.187)S(0.187)S(0.626)PQLQVK 193.41 1.16E-06 42399000 85799 92148 82413 83997 89987 80287 98610 83351 75666 80794 TRUE FALSE 92367.83741 87572.06432 85160.60829 77134.17641 86453.65823 83342.37804 85662.38855 94245.26189 82247.29191 78157.6984 1.181813683 1.120453469 1.089599746 0.9869044 1.10614386 1.066336135 1.096019846 1.205834663 1.052324897 1 16.25410036 -4.886696304 2.399347705 1.081445035 1.192651109 0.24579865 0.057460139 0.689360232 5.893481781 0.015493258 0.147352076 1.30E-05 4.886696304 0.111206074 SPVSFSPTDHSLSTS(ph)SGSSIFTPEYDDSR ddPTM_A459_MK2206_30min_R1 2 SPVSFSPTDHSLSTSSGSSIFTPEYDDSR 29 0 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 SPVSFSPTDHSLST(0.097)S(0.496)S(0.284)GS(0.098)S(0.025)IFTPEYDDSR;SPVSFSPTDHSLS(0.036)T(0.036)S(0.636)S(0.162)GS(0.103)S(0.027)IFT(0.001)PEYDDSR 127.4 7.78E-14 11323500 1146.15 874.99 1058.04 912.61 1766.87 1430.56 1891.28 1367.81 965.88 882.47 TRUE FALSE 1048.663924 818.027992 986.2231927 982.8993803 1696.491826 1511.557071 1765.116162 1355.851381 1066.286682 991.7970459 1.057337212 0.824793737 0.994380047 0.991028744 1.71052317 1.524058856 1.779715083 1.367065356 1.075105725 1 9.953901118 -6.176847298 7.563091996 1.451468905 0.955313834 0.449500742 0.237172002 0.24887182 19.74511606 0.071005319 0.091880257 6.66E-07 6.176847298 -0.496155071 SPVVSGDT(ph)SPR ddPTM_A459_MK2206_30min_R2 1 SPVVSGDTSPR 11 0 A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636;P10636-9;I3L170;P10636-3;P10636-4;P10636-5;P10636-7;P10636-8;P10636-2;P10636-6 A0A0G2JQJ7;P10636-2 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 SPVVS(0.007)GDT(0.893)S(0.1)PR 124.38 0.0083968 40121000 106810 110800 91950 127070 119450 136470 138810 122920 129390 141540 TRUE FALSE 114987.4557 105297.8331 95015.56711 116687.9745 114759.7928 141663.4615 120584.0803 138986.066 140644.1083 136921.5614 0.83980532 0.76903763 0.693941598 0.852224977 0.838142595 1.034632238 0.880679997 1.01507801 1.027187441 1 17.06299012 -6.504058293 1.741002266 0.988320374 0.773160623 0.725033523 0.059098274 0.189135179 1.157524889 0.022477957 0.024893252 3.13E-07 6.504058293 -0.21515975 SPYGGGRPGR ddPTM_A459_MK2206_30min_R1 1 SPYGGGRPGR 10 1 P46781 P46781 RPS9 40S ribosomal protein S9 0 102.62 0.042532 5532000 376.66 510.53 349.74 401.78 469.76 182.52 415.09 393.4 284.21 263 FALSE TRUE 344.6230891 477.2944042 326.0006232 432.7251652 451.0484645 192.8541247 387.4001035 389.9605453 313.7546466 295.5824255 1.165911973 1.614759075 1.102909358 1.463974607 1.525965096 0.652454639 1.310633076 1.319295437 1.061479369 1 8.207416683 SPYQEFTDHLVK ddPTM_A459_MK2206_30min_R1 2 SPYQEFTDHLVK 12 0 P15880;H0YEN5;E9PQD7 P15880 RPS2 40S ribosomal protein S2 0 ; 137.81 0.0018172 22710000 8242.4 7989.8 8004.6 7375.4 8354.4 7809.2 8054.3 7793.1 6593 6336 FALSE TRUE 7541.340597 7469.662568 7461.270054 7943.454586 8021.626557 8251.350155 7517.012343 7724.965748 7278.365943 7120.951514 1.059035521 1.048969727 1.047791161 1.115504658 1.126482401 1.15874264 1.055619088 1.084822124 1.022105814 1 12.79785431 -8.334324088 2.058265311 0.998896887 1.089676943 0.434077965 0.035104786 0.329110458 2.69158319 0.037169745 0.010628476 4.63E-09 8.334324088 0.090780057 SPYQEFTDHLVK ddPTM_A459_MK2206_30min_R2 2 SPYQEFTDHLVK 12 0 P15880;H0YEN5;E9PQD7 P15880 RPS2 40S ribosomal protein S2 0 ; 117.27 0.0067554 10694300 65257 91579 71744 104610 91152 84008 91480 72852 75778 86469 FALSE TRUE 70253.12609 87031.32003 74135.90915 96063.02837 87572.91448 87204.98331 79468.56611 82374.00654 82369.03346 83647.52361 0.839870962 1.040453038 0.886289348 1.148426447 1.046927759 1.042529169 0.95004087 0.984775197 0.984715744 1 16.35203521 -4.194661576 2.106003435 1.010866322 2.81E-12 0.358503673 0.066353642 9.828010877 7.903933947 0.017688242 35.19917467 6.39E-05 4.194661576 -1.010866322 SQAAPGS(ph)SPCR ddPTM_A459_MK2206_30min_R2 1 SQAAPGSSPCR 11 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 SQAAPGS(0.638)S(0.362)PCR 103.76 0.012969 12623000 29263 33934 25868 33624 40482 38440 42075 27196 32262 33614 TRUE FALSE 31503.39778 32248.8869 26730.42621 30876.81164 38892.47327 39902.86114 36550.50196 30750.61058 35068.09044 32517.17793 0.968823243 0.991749252 0.822040162 0.949553854 1.196059306 1.22713174 1.124036718 0.945672796 1.078448152 1 14.98891444 -6.138212076 6.813297815 1.100133585 0.926570529 0.449878413 0.087935054 0.246867992 12.70713493 0.028454812 0.036912983 7.27E-07 6.138212076 -0.173563056 SQAAPGSS(ph)PCR ddPTM_A459_MK2206_30min_R1 4 SQAAPGSSPCR 11 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 SQAAPGS(0.01)S(0.99)PCR;SQAAPGS(0.082)S(0.918)PCR;SQAAPGS(0.004)S(0.996)PCR;SQAAPGS(0.039)S(0.961)PCR 149.82 0.00062438 74595700 14829.9 13706.1 14134.5 11934.9 13663.3 12323.8 14568.8 12600.1 9583.6 11065.4 TRUE FALSE 13568.53913 12813.8304 13175.08952 12854.12807 13119.06183 13021.56291 13596.94193 12489.93865 10579.84952 12436.26529 1.091046131 1.030360007 1.059408851 1.033600343 1.054903664 1.047063777 1.09333 1.004315875 0.850725621 1 13.60226568 -8.025292654 7.266313922 0.925282916 1.055561963 0.651081212 0.038780009 0.109301076 23.23391003 0.022696419 0.009079803 9.43E-09 8.025292654 0.130279047 SQAAPGSS(ph)PCR ddPTM_A459_MK2206_30min_R2 3 SQAAPGSSPCR 11 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 SQAAPGS(0.068)S(0.932)PCR;SQAAPGS(0.012)S(0.988)PCR;SQAAPGS(0.035)S(0.965)PCR 143.58 0.00082779 154696000 92113 101269 91097 103719 118254 110112 129033 96537 95062 105815 TRUE FALSE 99165.2421 96240.12872 94134.12851 95244.82592 113610.7538 114302.3893 112090.8121 109154.7174 103330.3209 102362.2652 0.968767562 0.940191471 0.919617481 0.930468134 1.109889016 1.116645759 1.095040363 1.066356993 1.009457154 1 16.64332445 -6.253993101 24.96569094 1.073510549 0.938353056 0.723486153 0.038140533 291.3770118 976920.6387 0.011757765 0.014859054 5.57E-07 6.253993101 -0.135157493 SQANGAGALSYVS(ph)PNTSK ddPTM_A459_MK2206_30min_R1 2 SQANGAGALSYVSPNTSK 18 0 O95453;O95453-3;O95453-2;A0A494C0W0;A0A494C0K5;A0A494C0Q6;A0A494C002;A0A494C1N1;A0A494C0Q2;F5H1Z4;A0A494C1K5;A0A494C0P9;A0A494BZU6;A0A494C1G3;A0A494C156;A0A494BZW7 O95453 PARN Poly(A)-specific ribonuclease PARN 1 SQANGAGALSYVS(0.949)PNT(0.05)SK;SQANGAGALS(0.06)YVS(0.905)PNT(0.035)SK 221.51 1.72E-14 59499000 11670.3 10421.1 10813 9149.9 9776.9 8672.8 9471.1 9781.9 9887.5 9653 TRUE FALSE 10677.6797 9742.684496 10079.04369 9854.626883 9387.46537 9163.846441 8839.3002 9696.37788 10915.34101 10848.88652 0.984218951 0.898035433 0.929039461 0.908353762 0.865292982 0.844680828 0.814765662 0.893767104 1.006125467 1 13.40525936 -11.02442475 7.796635895 1.000013044 0.899611005 0.203371518 0.055566826 1.32E-05 8.47E-07 0.056567951 0.013717962 9.45E-12 11.02442475 -0.100402039 SQANGAGALSYVS(ph)PNTSK ddPTM_A459_MK2206_30min_R2 4 SQANGAGALSYVSPNTSK 18 0 O95453;O95453-3;O95453-2;A0A494C0W0;A0A494C0K5;A0A494C0Q6;A0A494C002;A0A494C1N1;A0A494C0Q2;F5H1Z4;A0A494C1K5;A0A494C0P9;A0A494BZU6;A0A494C1G3;A0A494C156;A0A494BZW7 O95453 PARN Poly(A)-specific ribonuclease PARN 1 SQANGAGALS(0.003)YVS(0.991)PNT(0.005)SK;SQANGAGALS(0.017)YVS(0.98)PNT(0.003)SK;SQANGAGALS(0.008)YVS(0.992)PNTSK;SQANGAGALSYVS(0.988)PNT(0.011)S(0.001)K 279.97 5.80E-67 167913000 251685 279142 267207 295494 288207 249120 316920 238449 240547 310360 TRUE FALSE 270954.1971 265280.2142 276115.548 271351.195 276890.5451 258600.4362 275308.0233 269615.103 261469.3433 300232.9786 0.902479795 0.883581196 0.919670948 0.903802095 0.922252267 0.861332547 0.916981288 0.898019612 0.87088815 1 18.19572293 -11.54125969 2.562122604 1.113323035 0.898313636 0.714629694 0.019395989 5847281.261 2155844.887 3899490.605 0.004732128 2.88E-12 11.54125969 -0.215009399 SQASDDSS(ph)LGK ddPTM_A459_MK2206_30min_R2 1 SQASDDSSLGK 11 0 O75140;H0Y770;A0A2R8Y6V4;A0A5F9UWT1;A0A2R8Y5T1;A0A2R8Y5K9;A0A2R8Y721;A0A2R8Y6H3;O75140-6;A0A2R8Y842;A0A2R8Y7U0;O75140-8;O75140-5;O75140-1;O75140-4;O75140-9;A0A2R8YEW8;A0A2R8Y5P2;A0A2R8Y7U6;A0A2R8YF97;A0A2R8Y6H8;A0A2R8YF50;O75140-2;A0A2R8Y5E9 O75140 DEPDC5 DEP domain-containing protein 5 1 SQAS(0.004)DDS(0.047)S(0.949)LGK 91.307 0.027194 0 5824 9712.7 11958 8476.7 11846 9121.7 10233 9226.7 13361 12779 TRUE FALSE 6269.889918 9230.381442 12356.67375 7784.126494 11380.86652 9468.832685 8889.394808 10432.66137 14523.11563 12362.02228 0.507189663 0.746672448 0.999567342 0.629680672 0.920631452 0.765961464 0.719089046 0.843928375 1.174817138 1 13.59362715 -8.11800282 4.634791445 1.082601065 0.767288723 0.481013156 0.13528214 0.196323355 6.408123573 0.096204687 0.034273651 7.62E-09 8.11800282 -0.315312342 SQASPS(ph)EDEETFELR ddPTM_A459_MK2206_30min_R2 1 SQASPSEDEETFELR 15 0 Q13829-2;Q13829 Q13829-2 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 1 SQAS(0.036)PS(0.893)EDEET(0.071)FELR 89.877 0.016143 10281000 51549 49223 55083 55158 57299 50369 59723 49741 54029 62547 TRUE FALSE 55495.63107 46778.6574 56919.43973 50651.41496 55049.15336 52285.82759 51881.29836 56242.31949 58728.34476 60506.09651 0.917190734 0.773123042 0.94072239 0.837129114 0.909811681 0.864141477 0.857455717 0.929531448 0.970618634 1 15.88479289 -8.102988155 1.991312435 0.994190895 0.869880956 0.513346425 0.044698806 0.257315745 1.818488021 0.036882865 0.011557357 7.89E-09 8.102988155 -0.124309939 SQAT(ph)SPGQTNGDSSLEVLATR ddPTM_A459_MK2206_30min_R1 1 SQATSPGQTNGDSSLEVLATR 21 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;C9J0X3;C9K0F0;A0A087WVI1;C9J760;Q96JY6-2 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 S(0.022)QAT(0.664)S(0.314)PGQTNGDSSLEVLATR 177.41 6.12E-12 0 767.35 766.32 1024.1 863.78 703.35 822.75 1029.1 772.65 707.6 478.87 TRUE FALSE 702.082853 716.4324287 954.5869453 930.3084853 675.3340801 869.333394 960.4506167 765.8948025 781.1575522 538.1960309 1.304511391 1.33117375 1.773678902 1.72856809 1.254810592 1.615272771 1.78457395 1.423077761 1.451436851 1 9.071987941 -8.872577945 1.622895594 1.000682595 1.538446185 0.416029994 0.186472753 1.522496508 5.736481011 0.186972927 0.053377379 1.34E-09 8.872577945 0.53776359 SQATS(ph)PGQTNGDSSLEVLATR ddPTM_A459_MK2206_30min_R2 2 SQATSPGQTNGDSSLEVLATR 21 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;C9J0X3;C9K0F0;A0A087WVI1;C9J760;Q96JY6-2 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 S(0.001)QAT(0.357)S(0.601)PGQT(0.041)NGDSSLEVLATR;SQATS(1)PGQTNGDSSLEVLATR 260.15 1.45E-48 7870400 21900 26162 25320 24790 32311 30898 32019 26207 25326 33113 TRUE FALSE 23576.68084 24862.83312 26164.15616 22764.5777 31042.30779 32073.84504 27814.86684 29632.34488 27528.8097 32032.52552 0.736023166 0.776174614 0.816799666 0.710670711 0.969087116 1.001289924 0.868331996 0.925070515 0.859401788 1 14.96724993 -6.265299286 24.99947037 0.933211826 0.765141337 0.737956942 0.051682841 182.583019 1182535.008 0.016071204 0.018918943 5.43E-07 6.265299286 -0.168070489 SQCTS(ph)PQPGTITPSASGCVR ddPTM_A459_MK2206_30min_R1 1 SQCTSPQPGTITPSASGCVR 20 0 Q9P2F5-2;Q9P2F5 Q9P2F5-2 STOX2 Storkhead-box protein 2 1 SQCT(0.321)S(0.677)PQPGT(0.002)ITPSASGCVR 157.98 1.36E-06 3420700 416.28 463.41 416.21 423.01 560.26 486.94 477.4 585.76 529.98 241.4 TRUE FALSE 380.8732 433.2419248 387.9588248 455.5903035 537.9436578 514.510122 445.5535171 580.6387621 585.0733176 271.3064545 1.403848651 1.5968729 1.429965334 1.679246092 1.982789753 1.896416814 1.642251814 2.140158306 2.156503496 1 8.08377956 -5.984990375 4.350269098 1.856164955 1.492439866 0.163940262 0.314784244 0.307994004 14.17872774 0.087723444 0.127627468 1.04E-06 5.984990375 -0.363725089 SQDADS(ph)PGSSGAPENLTFK ddPTM_A459_MK2206_30min_R2 1 SQDADSPGSSGAPENLTFK 19 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 MLLT4 Afadin 1 S(0.115)QDADS(0.781)PGS(0.074)S(0.03)GAPENLTFK 142.23 4.73E-05 0 23518 22166 21229 31235 25287 22421 30537 21133 22099 23379 TRUE FALSE 25318.55616 21065.26867 21936.76426 28683.00058 24294.10532 23274.24687 26527.45522 23895.15566 24021.13107 22616.14514 1.119490346 0.931426136 0.969960359 1.268253294 1.074193023 1.029098757 1.172943269 1.056552985 1.062123139 1 14.46506543 SQDAT(ph)FSPGSEQAEK ddPTM_A459_MK2206_30min_R1 2 SQDATFSPGSEQAEK 15 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SQDAT(0.795)FS(0.184)PGS(0.021)EQAEK;SQDAT(0.752)FS(0.028)PGS(0.22)EQAEK 351.46 1.80E-166 16983300 6815.1 6669.5 6881.7 5937.1 6373 5370.9 5978 6466.8 6523.6 6082 TRUE FALSE 6235.439957 6235.314338 6414.589378 6394.376471 6119.149915 5674.995717 5579.218527 6410.261449 7201.751565 6835.484077 0.912216295 0.912197917 0.938425034 0.935467978 0.895203594 0.83022587 0.816214106 0.937791878 1.053583255 1 12.7388278 -8.082331332 4.834713115 1.02288328 0.892439764 0.639827491 0.040083525 0.160087946 6.443165605 0.032321759 0.011764942 8.27E-09 8.082331332 -0.130443516 SQDAT(ph)FSPGSEQAEK ddPTM_A459_MK2206_30min_R2 1 SQDATFSPGSEQAEK 15 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SQDAT(0.387)FS(0.387)PGS(0.226)EQAEK 182.91 4.86E-05 55057000 50095 46166 46546 48587 49127 41197 63377 45916 43518 65415 TRUE FALSE 53930.31172 43873.46357 48097.82041 44617.28668 47198.02714 42764.7807 55055.52377 51917.37885 47303.11698 63280.51391 0.852242 0.693317119 0.760073164 0.705071497 0.745854043 0.675796988 0.870023335 0.82043232 0.747514741 1 15.9494737 -10.10945842 0.384161985 1.072783827 0.74062102 0.571223805 0.061936898 6.626959464 0.904751465 0.66760629 0.044085815 7.77E-11 10.10945842 -0.332162807 SQDATFS(ph)PGSEQAEK ddPTM_A459_MK2206_30min_R1 1 SQDATFSPGSEQAEK 15 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SQDAT(0.006)FS(0.992)PGS(0.002)EQAEK 367.31 2.50E-190 43852000 3350.4 3153.3 3852.8 2990.5 2659.8 2482.6 3044.8 3126.5 3090.2 2611.4 TRUE FALSE 3065.430886 2948.019597 3591.282671 3220.828828 2553.854534 2623.162667 2841.686948 3099.16534 3411.437348 2934.919947 1.044468313 1.004463376 1.223639055 1.097416245 0.870161565 0.893776564 0.968233205 1.055962478 1.162361294 1 11.51910544 -6.12277496 19.53194569 0.988029549 1.095634683 0.220579709 0.092540976 5.68253339 879.1984432 0.029883914 0.038580171 7.54E-07 6.12277496 0.107605135 SQDATFS(ph)PGSEQAEKS(ph)PGPIVSR ddPTM_A459_MK2206_30min_R1 1 SQDATFSPGSEQAEKSPGPIVSR 23 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 2 S(0.025)QDAT(0.415)FS(0.556)PGS(0.013)EQAEKS(0.963)PGPIVS(0.027)R 56.963 0.033006 11011000 4314.3 4456.7 4532.6 4297.2 3633 3328.9 4024.5 3890.3 3846.9 3448.3 TRUE FALSE 3947.34613 4166.56802 4224.939741 4628.171089 3488.289917 3517.379441 3756.032948 3856.287517 4246.799021 3875.501437 1.018538167 1.075104238 1.090165959 1.194212198 0.900087375 0.907593378 0.969173411 0.995042211 1.095806334 1 11.92016727 -6.269686863 24.99982136 0.973745859 1.092809422 0.4362358 0.064794614 625.8249817 1897000.412 0.021322966 0.024567017 5.37E-07 6.269686863 0.119063563 SQDATFSPGS(ph)EQAEK ddPTM_A459_MK2206_30min_R1 1 SQDATFSPGSEQAEK 15 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SQDAT(0.008)FS(0.084)PGS(0.908)EQAEK 252.01 3.48E-28 45973000 8714.7 8672.2 9221.6 7432.2 7366.4 6719.2 7507.9 7340.9 7565.7 7915.3 TRUE FALSE 7973.469002 8107.638204 8595.663485 8004.629332 7072.980689 7099.635297 7007.06169 7276.719285 8352.181589 8895.907121 0.896307582 0.911389709 0.966249239 0.899810354 0.795082569 0.798078847 0.787672532 0.817985079 0.938879136 1 13.11892601 -6.0535448 7.232350356 0.841184425 0.92495978 0.157096457 0.066982467 0.362223841 42.55331549 0.019430433 0.025408199 8.84E-07 6.0535448 0.083775355 SQDATFSPGS(ph)EQAEK ddPTM_A459_MK2206_30min_R2 3 SQDATFSPGSEQAEK 15 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SQDAT(0.002)FS(0.046)PGS(0.952)EQAEK;SQDAT(0.008)FS(0.026)PGS(0.967)EQAEK;SQDAT(0.205)FS(0.073)PGS(0.722)EQAEK 278.79 4.35E-55 116926000 145174 146138 157131 156024 143638 121925 178326 129466 118362 158849 TRUE FALSE 156288.6331 138880.9994 162369.6691 143276.3401 137998.0504 126564.9413 154911.582 146387.6507 128656.9128 153665.7701 1.017068622 0.90378618 1.056641755 0.932389432 0.898040274 0.823637829 1.008107283 0.952636691 0.837251606 1 17.22943631 -5.978313497 24.77377907 0.916992376 0.985442286 0.189718404 0.066807831 370.0242727 422697.2599 0.01855711 0.02752227 1.05E-06 5.978313497 0.06844991 SQDATFSPGSEQAEKS(ph)PGPIVSR ddPTM_A459_MK2206_30min_R1 3 SQDATFSPGSEQAEKSPGPIVSR 23 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SQDATFSPGSEQAEKS(0.991)PGPIVS(0.009)R;SQDATFSPGSEQAEKS(0.998)PGPIVS(0.002)R;SQDATFSPGS(0.001)EQAEKS(0.981)PGPIVS(0.018)R 125.12 5.62E-06 148863600 7491.2 7801.1 8154.7 6961.23 7425.7 6144.6 6741.6 6945.1 6170.3 4824 TRUE FALSE 6854.034102 7293.246972 7601.181684 7497.385141 7129.918645 6492.501942 6291.880165 6884.379723 6811.724766 5421.633539 1.264200919 1.345212088 1.402009492 1.382864608 1.315086789 1.197517666 1.160513731 1.269798055 1.25639712 1 12.40451189 -6.69698652 3.68762814 1.191480495 1.351789936 0.533474823 0.076998069 0.197920418 5.394401627 0.026563368 0.025783937 2.01E-07 6.69698652 0.160309442 SQDATFSPGSEQAEKS(ph)PGPIVSR ddPTM_A459_MK2206_30min_R2 2 SQDATFSPGSEQAEKSPGPIVSR 23 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SQDATFSPGS(0.001)EQAEKS(0.976)PGPIVS(0.023)R;SQDAT(0.001)FS(0.003)PGS(0.022)EQAEKS(0.93)PGPIVS(0.044)R 64.349 0.0026279 127200000 222754 261016 269112 282234 267217 223580 266705 176526 199807 240540 TRUE FALSE 239808.2175 248054.325 278084.0598 259174.5794 256724.7179 232088.4936 231686.3131 199598.5543 217185.8517 232691.1995 1.030585678 1.066023664 1.195077684 1.113813414 1.103285034 0.997409846 0.995681459 0.857782996 0.93336513 1 17.82805712 -7.034422754 1.741144854 0.928122163 1.107274713 0.649192926 0.053984885 0.219559004 1.334587256 0.026659726 0.019719424 9.24E-08 7.034422754 0.17915255 SQDATFSPGSEQAEKSPGPIVS(ph)R ddPTM_A459_MK2206_30min_R1 1 SQDATFSPGSEQAEKSPGPIVSR 23 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SQDATFSPGSEQAEKS(0.095)PGPIVS(0.905)R 105.44 1.18E-05 14472000 1622.4 1358.5 1494 1440.4 1703.6 1328.6 1727.1 1076 1012 1114.7 TRUE FALSE 1484.40636 1270.061403 1392.591443 1551.339858 1635.742005 1403.824184 1611.88831 1066.592645 1117.201021 1252.797452 1.184873388 1.013780321 1.111585469 1.238300617 1.305671561 1.120551596 1.286631217 0.851368786 0.891765081 1 10.29093747 -7.769009933 24.99883471 0.903675132 1.175925853 0.652677182 0.088720819 111.8302435 369269.2744 0.049986213 0.024744462 1.70E-08 7.769009933 0.272250721 SQDKS(ph)LLDGEGPQAVGGQDVAFSR ddPTM_A459_MK2206_30min_R2 1 SQDKSLLDGEGPQAVGGQDVAFSR 24 1 A1X283 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B 1 S(0.456)QDKS(0.544)LLDGEGPQAVGGQDVAFSR 54.259 0.0092808 2707600 7162.8 11218 8667.9 9087 8541.2 8012.7 12911 6576 9324.5 6849.1 TRUE FALSE 7711.189475 10660.93043 8956.88346 8344.563032 8205.829572 8317.628913 11215.77019 7435.505779 10135.52816 6625.614428 1.163845189 1.609047817 1.351857033 1.259439879 1.238500921 1.255374728 1.692789448 1.122236414 1.529749167 1 12.69383853 -11.68474606 2.46530586 0.100793714 1.358757884 0.25767899 0.182333493 11004009.91 3397681.373 55107232.77 0.043934989 2.07E-12 11.68474606 1.25796417 SQDLHCGACR ddPTM_A459_MK2206_30min_R1 2 SQDLHCGACR 10 0 F8W031;F8VXJ7;F8W1U5;F8VP03;Q9Y2B0-2;Q9Y2B0 F8W031;Q9Y2B0 CNPY2 Protein canopy homolog 2 0 ; 101.39 0.023049 4649400 8329 6401.6 6539 5597.2 7854.1 7092.4 8718.8 7257.1 1923.25 5222.1 FALSE TRUE 7620.574813 5984.854676 6095.150899 6028.297314 7541.254566 7493.965559 8137.18476 7193.65194 2123.17872 5869.053173 1.298433425 1.019730866 1.038523714 1.02713285 1.284918426 1.276861078 1.386456132 1.225692071 0.361758304 1 12.51891206 -8.239550962 24.93377331 0.68087914 1.190228989 0.546586948 0.1871638 494.8472676 563697.7762 0.126261152 0.047633244 5.76E-09 8.239550962 0.509349849 SQDLHCGACR ddPTM_A459_MK2206_30min_R2 2 SQDLHCGACR 10 0 F8W031;F8VXJ7;F8W1U5;F8VP03;Q9Y2B0-2;Q9Y2B0 F8W031;Q9Y2B0 CNPY2 Protein canopy homolog 2 0 ; 131.42 0.0036714 4870300 44538 63838 52028 66849 64924 69117 70107 49505 63472 54667 FALSE TRUE 47947.86352 60667.89775 53762.58755 61387.22286 62374.75754 71747.29587 60901.86669 55975.47348 68992.67983 52883.22027 0.906674429 1.147205058 1.016628475 1.1608072 1.179481076 1.356711931 1.151629314 1.05847324 1.304623271 1 15.69052241 -3.760806708 0.764841648 1.17889817 6.73E-10 0.31507501 0.108148551 13.20361854 1.827443499 0.039983668 19.1497884 0.000173458 3.760806708 -1.17889817 SQDQDS(ph)EVNELSR ddPTM_A459_MK2206_30min_R1 1 SQDQDSEVNELSR 13 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 S(0.002)QDQDS(0.998)EVNELSR 176.42 4.86E-10 0 1168.8 1091.8 1000.2 963.78 1359.4 1412.4 1282.3 1125.8 1014.9 1032.3 TRUE FALSE 1069.387422 1020.723622 932.3092107 1038.010503 1305.252219 1492.368867 1196.760107 1115.957249 1120.402487 1160.189117 0.921735436 0.879790722 0.803583827 0.894690777 1.125034014 1.286315175 1.031521576 0.961875295 0.965706771 1 10.18014428 -6.18388622 5.890809966 1.069248695 0.867611701 0.492058154 0.092868596 0.213378064 12.66584317 0.030935448 0.040093368 6.55E-07 6.18388622 -0.201636994 SQDQDS(ph)EVNELSR ddPTM_A459_MK2206_30min_R2 2 SQDQDSEVNELSR 13 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 SQDQDS(1)EVNELSR;SQDQDS(1)EVNELSR 226.67 6.93E-13 64768000 141770 132456 126630 169228 134613 117120 155796 108113 131171 136492 TRUE FALSE 152624.0202 125878.4276 130851.781 155401.5311 129327.4172 121577.0837 135339.7981 122243.7403 142580.0165 132038.2772 1.155907389 0.953348001 0.991013998 1.176943038 0.979469136 0.920771508 1.025004271 0.925820473 1.07983851 1 17.01059669 SQDSVS(ph)SPSPQK ddPTM_A459_MK2206_30min_R2 1 SQDSVSSPSPQK 12 0 Q70CQ4;I3L4X5 Q70CQ4 USP31 Ubiquitin carboxyl-terminal hydrolase 31 1 SQDSVS(0.682)S(0.317)PS(0.001)PQK 141.54 0.0036051 0 16016 21365 16024 19041 14693 18471 18941 18631 17745 16855 TRUE FALSE 17242.19727 20304.04517 16558.23216 17485.28939 14116.07899 19173.92685 16454.02395 21066.13567 19288.42802 16305.02273 1.057477659 1.245263224 1.015529536 1.072386692 0.865750341 1.175952169 1.009138363 1.29200284 1.182974617 1 13.99302883 -7.741822178 24.99918596 1.178116653 1.065360616 0.116802998 0.11615272 421.5266184 537173.8812 0.053948132 0.031092216 1.81E-08 7.741822178 -0.112756036 SQDSVSSPS(ph)PQK ddPTM_A459_MK2206_30min_R2 2 SQDSVSSPSPQK 12 0 Q70CQ4;I3L4X5 Q70CQ4 USP31 Ubiquitin carboxyl-terminal hydrolase 31 1 SQDS(0.002)VS(0.092)S(0.328)PS(0.577)PQK;SQDSVS(0.134)S(0.043)PS(0.823)PQK 103.88 0.010294 10411600 49327 58349 54623 62951 54581 48008 72389 56498 53860 64956 TRUE FALSE 53103.51305 55451.47351 56444.10356 57807.70193 52437.87569 49834.97808 62884.23735 63882.48259 58544.64544 62836.49104 0.845106278 0.882472471 0.898269503 0.919970243 0.834513112 0.793089768 1.00075985 1.016646244 0.931698198 1 15.939315 -7.280430763 24.98380971 0.988663274 0.866158611 0.710082313 0.039089074 497.8503621 654936.482 0.017380313 0.011738845 5.24E-08 7.280430763 -0.122504663 SQDSYPGS(ph)PSLSPR ddPTM_A459_MK2206_30min_R1 2 SQDSYPGSPSLSPR 14 0 A0A0D9SEU5;R4GMX8;Q6VN20-2;Q6VN20-3;Q6VN20 A0A0D9SEU5 RANBP10 Ran-binding protein 10 1 SQDSYPGS(0.998)PS(0.002)LSPR;SQDS(0.001)YPGS(0.992)PS(0.008)LSPR 252.1 1.26E-27 19741500 5171.9 4473.7 5103.6 4395.4 5196 4397.9 5611.8 4775 4268.9 4252.9 TRUE FALSE 4732.002746 4182.461317 4757.181851 4733.93447 4989.032317 4646.905297 5237.447061 4733.252678 4712.667431 4779.78136 0.990004017 0.875031932 0.995271853 0.990408162 1.043778353 0.972200389 1.095750342 0.990265521 0.985958787 1 12.22272891 -5.448351795 7.096654881 1.012518157 0.932309675 0.348202532 0.042417663 0.25880019 21.19497341 0.010635071 0.022210395 3.56E-06 5.448351795 -0.080208482 SQDSYPGS(ph)PSLSPR ddPTM_A459_MK2206_30min_R2 2 SQDSYPGSPSLSPR 14 0 A0A0D9SEU5;R4GMX8;Q6VN20-2;Q6VN20-3;Q6VN20 A0A0D9SEU5 RANBP10 Ran-binding protein 10 1 SQDSYPGS(0.85)PS(0.15)LSPR;SQDS(0.012)Y(0.001)PGS(0.954)PS(0.021)LS(0.012)PR 199.05 8.63E-05 18710100 44879 49176 45827 50901 44201 50161 54901 47330 54706 52902 TRUE FALSE 48314.97075 46733.99135 47354.84931 46742.22548 42465.44665 52069.912 47692.43275 53516.19351 59464.22899 51175.81207 0.944097783 0.913204685 0.925336548 0.913365584 0.829795267 1.017471143 0.931933091 1.04573218 1.161959656 1 15.64317447 -7.813501348 3.094547384 1.088501903 0.92220426 0.582448006 0.056300828 0.166421495 3.19161997 0.034125672 0.015136608 1.54E-08 7.813501348 -0.166297643 SQDSYPGSPS(ph)LSPR ddPTM_A459_MK2206_30min_R2 1 SQDSYPGSPSLSPR 14 0 A0A0D9SEU5;R4GMX8;Q6VN20-2;Q6VN20-3;Q6VN20 A0A0D9SEU5 RANBP10 Ran-binding protein 10 1 SQDSYPGS(0.252)PS(0.748)LSPR 226.06 4.45E-13 9675800 26545 30706 27248 28350 28371 33482 35090 31567 30155 32527 TRUE FALSE 28577.30561 29181.18469 28156.43472 26033.71431 27257.01199 34756.18097 30482.64085 35692.91529 32777.82739 31465.64665 0.908206525 0.92739822 0.894830957 0.827369436 0.866246681 1.104575455 0.968759396 1.134345519 1.041702011 1 14.94148997 -6.754534594 24.99417453 1.053203258 0.884541868 0.728052462 0.050421 83.41078981 301932.8697 0.01675194 0.016400923 1.76E-07 6.754534594 -0.16866139 SQDSYPGSPSLS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SQDSYPGSPSLSPR 14 0 A0A0D9SEU5;R4GMX8;Q6VN20-2;Q6VN20-3;Q6VN20 A0A0D9SEU5 RANBP10 Ran-binding protein 10 1 SQDSYPGS(0.011)PS(0.009)LS(0.98)PR 210.67 4.20E-06 12089000 28873 32662 21802 36005 36483 34155 42708 30286 38162 37317 TRUE FALSE 31083.53908 31040.05257 22528.8678 33063.27633 35050.49411 35454.79246 37100.3883 34244.48419 41481.26178 36099.34935 0.861055383 0.859850749 0.624079608 0.915896738 0.970945315 0.982144917 1.027730111 0.948617768 1.149086134 1 15.13968521 -5.993169726 24.80424831 1.00367763 0.786231977 0.626891568 0.079758377 104.3118866 378804.481 0.022527393 0.033324155 1.02E-06 5.993169726 -0.217445653 SQDSYPVS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SQDSYPVSPR 10 0 Q96S59-2;Q96S59-3;Q96S59 Q96S59-2 RANBP9 Ran-binding protein 9 1 SQDSYPVS(1)PR 87.719 0.033258 5962100 35977 31026 38528 40181 31576 42470 41184 36677 34030 46060 TRUE FALSE 38731.42678 29485.29396 39812.50429 36898.08377 30336.16758 44086.22561 35776.49133 41470.80983 36989.86789 44557.06597 0.869254425 0.661742269 0.893517188 0.828108471 0.680838536 0.989432869 0.802936427 0.930734754 0.830168394 1 15.44336662 -6.766871032 24.99998591 0.899593015 0.787986146 0.320714854 0.089472987 178.6160465 822101.2466 0.029627801 0.026883792 1.71E-07 6.766871032 -0.111606869 SQDVAVS(ph)PQQQQCSK ddPTM_A459_MK2206_30min_R1 4 SQDVAVSPQQQQCSK 15 0 H3BQ37;H3BPW9;Q96F86;H3BTD6 H3BQ37 EDC3 Enhancer of mRNA-decapping protein 3 1 SQDVAVS(1)PQQQQCSK;SQDVAVS(1)PQQQQCSK;SQDVAVS(1)PQQQQCSK;S(0.428)QDVAVS(0.572)PQQQQCSK 311.43 1.32E-94 118832200 12708.2 12747.7 13638.5 12594.1 13257.4 12640.5 14327.5 14149.9 11762.9 11504.2 TRUE FALSE 11627.30086 11917.82241 12712.75662 13564.09976 12729.32968 13356.19419 13371.73862 14026.18892 12985.69555 12929.42715 0.899289715 0.921759508 0.983242063 1.049087451 0.984523872 1.03300742 1.034209673 1.084826787 1.004351964 1 13.65837074 -5.354540089 2.115716353 1.029813726 0.900837428 0.746105006 0.026977638 0.162060579 1.359316806 0.007670807 0.02460569 4.42E-06 5.354540089 -0.128976298 SQDVAVS(ph)PQQQQCSK ddPTM_A459_MK2206_30min_R2 4 SQDVAVSPQQQQCSK 15 0 H3BQ37;H3BPW9;Q96F86;H3BTD6 H3BQ37 EDC3 Enhancer of mRNA-decapping protein 3 1 SQDVAVS(1)PQQQQCSK;S(0.004)QDVAVS(0.996)PQQQQCSK;S(0.007)QDVAVS(0.993)PQQQQCSK;S(0.002)QDVAVS(0.998)PQQQQCSK 258.13 2.96E-36 378106000 234469 276836 258534 279838 282959 273737 339875 268349 280140 336890 TRUE FALSE 252420.1269 263088.7268 267153.3945 256974.3402 271848.6079 284154.2534 295249.0042 303423.1357 304506.0708 325897.3069 0.774538855 0.807274934 0.819747168 0.788513237 0.834154202 0.871913475 0.905957177 0.931039101 0.934362035 1 18.3140579 -7.379430583 0.5173734 0.995157787 0.781711809 0.96062305 0.013955138 0.168764211 0.097325902 0.014287956 0.011533487 4.17E-08 7.379430583 -0.213445978 SQEDEIS(ph)SPVNK ddPTM_A459_MK2206_30min_R1 2 SQEDEISSPVNK 12 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SQEDEIS(0.928)S(0.072)PVNK;SQEDEIS(0.5)S(0.5)PVNK 253.06 1.17E-18 112590000 25559 22220 19938.8 16738.2 17099.2 15300.6 16102.1 13773.6 15866.3 13716.2 TRUE FALSE 23385.07283 20773.47396 18585.40981 18027.37906 16418.10266 16166.90675 15027.95829 13653.17887 17515.65866 15415.46641 1.516987694 1.347573496 1.20563396 1.169434553 1.065040928 1.048745871 0.974862381 0.885680557 1.136239294 1 13.91209092 -4.591320975 0.540235057 0.985057358 1.986444233 0.881927136 0.061048122 1.52591172 0.292956455 0.03422312 1.007650907 2.56E-05 4.591320975 1.001386875 SQEDEIS(ph)SPVNK ddPTM_A459_MK2206_30min_R2 1 SQEDEISSPVNK 12 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SQEDEIS(0.624)S(0.376)PVNK 77.185 0.046334 95304000 208310 219050 183670 206490 226120 189420 259540 172050 158990 227640 TRUE FALSE 224258.3738 208172.2955 189793.4661 189619.1065 217241.3926 196628.5108 225462.0862 194537.5257 172818.6628 220212.1254 1.018374321 0.945326217 0.861866556 0.861074775 0.986509677 0.892905013 1.023840471 0.883409691 0.784782684 1 17.74853438 -7.971734111 24.99908219 0.872959466 0.936593706 0.081942803 0.073469945 414.0732389 366216.8397 0.039403295 0.018928248 1.07E-08 7.971734111 0.06363424 SQEDEISS(ph)PVNK ddPTM_A459_MK2206_30min_R2 4 SQEDEISSPVNK 12 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SQEDEIS(0.002)S(0.998)PVNK;SQEDEIS(0.17)S(0.83)PVNK;SQEDEIS(0.276)S(0.724)PVNK;SQEDEIS(0.093)S(0.907)PVNK 159.58 0.0004647 125356000 625635 505688 489864 520733 538797 445948 667928 400143 402375 540561 TRUE FALSE 673534.0966 480576.2693 506195.8213 478187.4482 517641.1225 462918.8636 580228.2513 452443.064 437372.8502 522922.5388 1.288018868 0.919019995 0.968013011 0.914451783 0.989900194 0.885253224 1.109587383 0.865220048 0.836400839 1 18.99623773 -4.758952491 24.99509447 0.943623893 1.288019322 0.656733288 0.074810381 40.57624683 407736.2134 0.018192938 0.119715616 1.74E-05 4.758952491 0.344395429 SQEEPKDT(ph)FEHDPSESIDEFNK ddPTM_A459_MK2206_30min_R1 1 SQEEPKDTFEHDPSESIDEFNK 22 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.165)QEEPKDT(0.823)FEHDPS(0.011)ES(0.001)IDEFNK 51.688 0.024719 21628000 4052.8 4283.7 4044 3461.8 2869.1 2654.5 3824.6 3763.6 3637.4 3907.9 TRUE FALSE 3708.088078 4004.830351 3769.504547 3728.428436 2754.817672 2804.795496 3569.467912 3730.695242 4015.520747 4392.040155 0.84427463 0.911838282 0.858258216 0.848905817 0.627229619 0.638608801 0.81271295 0.849421934 0.914272321 1 12.10067553 -10.11976721 10.46084403 1 0.807751274 0.25931679 0.095245865 0 0 0.104173814 0.025265861 7.59E-11 10.11976721 -0.192248726 SQEEPKDT(ph)FEHDPSESIDEFNK ddPTM_A459_MK2206_30min_R2 2 SQEEPKDTFEHDPSESIDEFNK 22 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.424)QEEPKDT(0.576)FEHDPSESIDEFNK;S(0.455)QEEPKDT(0.544)FEHDPS(0.001)ESIDEFNK 76.027 0.00099324 48327000 114741 114514 115170 112929 114063 69310 121037 109517 73672 125517 TRUE FALSE 123525.6592 108827.4013 119009.7103 103702.3395 109584.3135 71947.64062 105144.6965 123831.2479 80079.85739 121421.3906 1.017330296 0.89627866 0.980137929 0.854069773 0.902512424 0.592545023 0.86594871 1.019847058 0.65952018 1 16.88966308 -5.912520531 2.305640346 0.830430675 0.959733212 0.154203569 0.128660031 0.575856727 6.212566421 0.039356767 0.064981268 1.22E-06 5.912520531 0.129302537 SQEEPKDTFEHDPSES(ph)IDEFNK ddPTM_A459_MK2206_30min_R2 1 SQEEPKDTFEHDPSESIDEFNK 22 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 SQEEPKDTFEHDPS(0.043)ES(0.957)IDEFNK 65.278 0.0030041 4667700 32967 33784 32770 32468 33825 19858 36834 28104 23680 30357 TRUE FALSE 35490.97887 32106.33569 33862.53544 29815.26054 32496.86054 20613.71011 31997.65155 31777.2893 25739.6436 29366.45358 1.208555155 1.093299727 1.15310265 1.015282981 1.10659806 0.701947549 1.089598765 1.082094888 0.876498196 1 14.84188143 -5.965597735 1.554883446 0.96898722 1.153993833 0.322419416 0.115065236 0.500014135 2.44970707 0.039323217 0.070074857 1.08E-06 5.965597735 0.185006614 SQEES(ph)PPGSTK ddPTM_A459_MK2206_30min_R2 1 SQEESPPGSTK 11 0 P30304-2;P30304 P30304-2 CDC25A M-phase inducer phosphatase 1 1 S(0.089)QEES(0.906)PPGS(0.005)TK 79.283 0.045977 20471000 126530 112740 105880 103780 101240 74260 119940 103980 76648 118400 TRUE FALSE 136217.2341 107141.4955 109409.9864 95300.84202 97264.80891 77086.01634 104191.7339 117570.543 83314.70449 114536.6177 1.189289826 0.935434429 0.955240242 0.832055669 0.849202734 0.67302508 0.909680555 1.026488693 0.727406712 1 16.80544938 -3.755778301 1.039716097 0.858439336 3.256523426 0.455655521 0.1047658 11.59746913 1.997855939 0.032857131 50.75169802 0.000175478 3.755778301 2.39808409 SQEPIPDDQKVS(ph)DDDKEKGEGALPTGK ddPTM_A459_MK2206_30min_R1 1 SQEPIPDDQKVSDDDKEKGEGALPTGK 27 3 E5RJU9;Q86UE4;H0YBJ8 E5RJU9 MTDH Protein LYRIC 1 S(0.001)QEPIPDDQKVS(0.997)DDDKEKGEGALPT(0.002)GK 54.605 0.0072187 18118000 2035.8 3725.9 2674.6 3081.5 938.71 1030 1521.5 1587.7 3943.7 2819.5 TRUE FALSE 1862.64452 3483.343233 2493.055604 3318.837664 901.3191929 1088.31771 1420.003511 1573.818906 4353.661728 3168.800946 0.58780736 1.099262242 0.786750461 1.047348104 0.284435409 0.343447799 0.448120136 0.496660703 1.373914551 1 11.62972132 -6.23823755 24.7619007 0.606398159 0.889251214 0.083690903 0.335317037 1479.822268 1579323.926 0.099532828 0.128411009 5.78E-07 6.23823755 0.282853055 SQEPIPDDQKVS(ph)DDDKEKGEGALPTGK ddPTM_A459_MK2206_30min_R2 1 SQEPIPDDQKVSDDDKEKGEGALPTGK 27 3 E5RJU9;Q86UE4;H0YBJ8 E5RJU9 MTDH Protein LYRIC 1 S(0.002)QEPIPDDQKVS(0.995)DDDKEKGEGALPT(0.003)GK 44.711 0.041947 7791600 21906 11166 12265 7571.2 9059 6206.9 18681 9156.7 11946 17051 TRUE FALSE 23583.1402 10611.51268 12673.90898 6952.608741 8703.298142 6443.107929 16228.16226 10353.51213 12985.04149 16494.62727 1.429746779 0.643331462 0.768365891 0.421507478 0.527644426 0.390618583 0.983845345 0.627689972 0.787228549 1 14.00970856 -4.760611284 24.91490904 0.661573915 1.429747713 0.556575386 0.199010411 14.20891471 427237.0008 0.0488905 0.286593906 1.74E-05 4.760611284 0.768173798 SQEPS(ph)PVGSR ddPTM_A459_MK2206_30min_R1 1 SQEPSPVGSR 10 0 Q96CP6-2;Q96CP6-3;Q96CP6;M0QZ12 Q96CP6-2 GRAMD1A GRAM domain-containing protein 1A 1 SQEPS(0.994)PVGS(0.006)R 89.663 0.030526 6522400 2640.8 2737.6 2406.3 2298.3 3922.5 3552.9 4374.6 3952.6 3924.6 3281.8 TRUE FALSE 2416.186093 2559.381742 2242.96706 2475.315464 3766.258519 3754.062128 4082.778416 3918.042835 4332.576214 3688.37416 0.655081613 0.693905128 0.608118093 0.671112896 1.021116176 1.017809464 1.106931737 1.062268269 1.174657458 1 11.8487693 -6.291440656 3.525610204 1.073746716 0.650961457 0.943579548 0.048862447 0.051115188 1.346760422 0.015652062 0.018880128 5.11E-07 6.291440656 -0.422785259 SQEPS(ph)PVGSR ddPTM_A459_MK2206_30min_R2 2 SQEPSPVGSR 10 0 Q96CP6-2;Q96CP6-3;Q96CP6;M0QZ12 Q96CP6-2 GRAMD1A GRAM domain-containing protein 1A 1 SQEPS(1)PVGSR;SQEPS(0.981)PVGS(0.019)R 108.23 0.010805 26674000 198660 155027 156993 175922 166500 209407 233825 165100 204069 214165 TRUE FALSE 213869.5623 147328.5846 162227.0683 161548.6099 159962.3734 217376.1301 203123.4966 186679.1369 221818.5527 207176.8136 1.032304526 0.71112487 0.783036796 0.779762016 0.772105578 1.04923001 0.98043547 0.901061917 1.070672673 1 17.66050303 -6.757247778 24.9999952 0.992856107 0.806051373 0.512211899 0.089688126 86.9960346 518871.2677 0.029372653 0.028372729 1.75E-07 6.757247778 -0.186804735 SQES(ph)GYYDR ddPTM_A459_MK2206_30min_R1 1 SQESGYYDR 9 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 S(0.358)QES(0.642)GYYDR 147.62 0.0016191 24369000 1333.8 1251.4 1374.2 1107.8 1292.2 1162.6 1115.9 1175.2 1181.5 1089.5 TRUE FALSE 1220.353306 1169.933633 1280.923133 1193.122948 1240.728938 1228.425407 1041.460347 1164.92535 1304.321153 1224.475485 0.996633514 0.955456966 1.046099451 0.974395129 1.013273808 1.003225807 0.85053589 0.951366821 1.065208057 1 10.25794818 SQESGYYDR ddPTM_A459_MK2206_30min_R1 1 SQESGYYDR 9 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 0 153.97 0.013075 17995000 4732.1 5242.6 5392.8 4739.4 5994.8 4639.6 5126.8 4950.3 4648.2 3985.1 FALSE TRUE 4329.610046 4901.305787 5026.751761 5104.429409 5756.014422 4902.290143 4784.800526 4907.020049 5131.397024 4478.804274 0.966688826 1.094333551 1.122342361 1.13968575 1.285167663 1.094553332 1.06832097 1.095609397 1.145706914 1 12.12889791 -4.725697971 2.481554589 1.126179652 0.916258219 0.30046258 0.068609663 0.820098472 5.55953452 0.018268415 0.392220573 1.88E-05 4.725697971 -0.209921433 SQFCENS(ph)NDTVK ddPTM_A459_MK2206_30min_R2 1 SQFCENSNDTVK 12 0 Q14207 Q14207 NPAT Protein NPAT 1 SQFCENS(0.854)NDT(0.146)VK 207.64 8.21E-28 0 14860 19916 15457 20928 17776 18110 22666 15682 16351 15776 TRUE FALSE 15997.69303 18927.0004 15972.32867 19218.11545 17078.02492 18799.18874 19689.92697 17731.69124 17773.18042 15261.23041 1.048257093 1.240201471 1.04659508 1.259276935 1.119046398 1.231826546 1.290192628 1.161878221 1.164596821 1 13.89758366 -4.742291183 24.68343141 1.17655181 1.048256591 0.135447604 0.088650249 2091.865603 2696403.293 0.020720911 0.733602742 1.81E-05 4.742291183 -0.128295219 SQGDEAGGHGEDRPEPLS(ph)PK ddPTM_A459_MK2206_30min_R1 2 SQGDEAGGHGEDRPEPLSPK 20 1 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK 85.11 0.0013549 94305000 7745.4 8197.9 8651.9 7596.2 6338.1 5233.1 6241.3 7303.7 7584.2 7364.1 TRUE FALSE 7086.613057 7664.21522 8064.633134 8181.26064 6085.640056 5529.3936 5824.954265 7239.844521 8372.60473 8276.420304 0.856241321 0.926030209 0.974410776 0.988502316 0.735298575 0.668089995 0.703801167 0.874755541 1.011621501 1 13.0147912 -6.254258301 24.98664456 0.811367351 0.938285347 0.153925811 0.113267655 946.846774 3294563.357 0.036003662 0.045495818 5.57E-07 6.254258301 0.126917996 SQGDEAGGHGEDRPEPLS(ph)PK ddPTM_A459_MK2206_30min_R2 3 SQGDEAGGHGEDRPEPLSPK 20 1 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK 66.613 0.0085081 279039000 480918 472857 487558 447718 478988 326843 615327 395743 397431 478676 TRUE FALSE 517737.4518 449375.609 503812.9404 411138.0072 460180.5244 339281.2394 534533.8258 447467.9689 431998.83 463056.8413 1.118086174 0.970454529 1.088015326 0.887878054 0.993788415 0.732698902 1.154358986 0.966334862 0.932928296 1 18.82082977 -1.522880578 0.836513141 0.958990138 49.90675775 0.151074391 0.106523367 1207.113812 3.569199805 0.036307847 112324.7563 0.029999873 1.522880578 48.94776761 SQGS(ph)GNEAEPLGK ddPTM_A459_MK2206_30min_R1 3 SQGSGNEAEPLGK 13 0 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3 B8ZZZ7 SPATS2L SPATS2-like protein 1 S(0.004)QGS(0.996)GNEAEPLGK;S(0.022)QGS(0.978)GNEAEPLGK;SQGS(1)GNEAEPLGK 147.83 0.00059641 40028000 12566.9 10861.1 12684.4 11450.6 12630.3 9471.3 13007.6 13913.1 13097.4 11812.7 TRUE FALSE 11498.01916 10154.04042 11823.41827 12332.5272 12127.20841 10007.55682 12139.88674 13791.45923 14458.9216 13276.14646 0.866066008 0.764833414 0.890576065 0.928923708 0.913458468 0.753799821 0.914413439 1.038814936 1.089090245 1 13.69654883 -7.678474774 3.675892588 1.050440923 0.855452184 0.683050273 0.057571918 0.135471204 3.549807033 0.03186847 0.016657988 2.10E-08 7.678474774 -0.19498874 SQGS(ph)GNEAEPLGK ddPTM_A459_MK2206_30min_R2 2 SQGSGNEAEPLGK 13 0 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3 B8ZZZ7 SPATS2L SPATS2-like protein 1 SQGS(1)GNEAEPLGK;SQGS(1)GNEAEPLGK 150.37 0.00049432 49393000 268520 282750 260500 266650 304000 267360 344430 241754 197389 331990 TRUE FALSE 289078.0977 268709.0462 269184.94 244863.842 292063.4325 277534.5721 299205.9273 273352.0779 214557.5384 321157.1935 0.900114036 0.836690106 0.838171915 0.76244234 0.909409593 0.864170499 0.931649464 0.851147299 0.66807639 1 18.29292009 -4.752983043 23.14345897 0.848195748 0.900114294 0.027026339 0.086052067 553.9324576 1515697.058 0.020734596 0.219588007 1.77E-05 4.752983043 0.051918546 SQGS(ph)SQFR ddPTM_A459_MK2206_30min_R1 1 SQGSSQFR 8 0 Q15172 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform 1 S(0.003)QGS(0.987)S(0.01)QFR 100.82 0.017533 25894000 4869 4738.5 4395.6 3655.2 3764.2 3283.6 4610.3 4480 1450.9 3235.3 TRUE FALSE 4454.865982 4430.022789 4097.238919 3936.724137 3614.263943 3469.514594 4302.755299 4440.831832 1601.726247 3636.113389 1.225172459 1.218340111 1.126818248 1.082673645 0.993990989 0.954182178 1.183339142 1.221312802 0.440505033 1 11.82818147 -5.212365072 0.29828365 0.893685139 1.44423837 0.243180488 0.194359032 9.861408096 0.880871901 0.232941959 1.943520279 6.13E-06 5.212365072 0.550553232 SQGS(ph)SQFR ddPTM_A459_MK2206_30min_R2 2 SQGSSQFR 8 0 Q15172 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform 1 S(0.108)QGS(0.793)S(0.099)QFR;SQGS(0.989)S(0.01)QFR 100.82 0.017533 194696000 48658 70302 49904 72615 59768 57079 64786 54974 65369 59879 TRUE FALSE 52383.29389 66810.90491 51567.77445 66682.12222 57421.20801 59251.18134 56279.52038 62159.29055 71054.67746 57925.15313 0.904327241 1.153400575 0.890248392 1.151177314 0.991300064 1.022892097 0.97159036 1.073096698 1.22666361 1 15.82190233 -7.999163532 24.32424628 1.125514578 1.018161187 0.150674373 0.097057 29.79789643 866540.7125 0.049002763 0.023200297 1.00E-08 7.999163532 -0.107353391 SQIDVALS(ph)QDSTYQGER ddPTM_A459_MK2206_30min_R1 3 SQIDVALSQDSTYQGER 17 0 Q92900-2;Q92900 Q92900-2 UPF1 Regulator of nonsense transcripts 1 1 SQIDVALS(0.969)QDS(0.031)TYQGER;SQIDVALS(0.531)QDS(0.466)T(0.003)YQGER;SQIDVALS(0.999)QDS(0.001)TYQGER 364 4.50E-198 150560600 12808.59 12993.19 12552.87 9887.88 13659.1 12468.99 12532.2 10890.79 9876.72 9449.26 TRUE FALSE 11719.15216 12147.33097 11700.81616 10649.44623 13115.02912 13174.97344 11696.1998 10795.57297 10903.44039 10619.90567 1.103508122 1.143826636 1.101781553 1.002781622 1.234947798 1.240592323 1.101346864 1.016541324 1.026698422 1 13.37448333 -7.675927289 4.189187009 1.015546939 1.137198416 0.422827198 0.064297 0.236739608 7.700895438 0.035994667 0.019359208 2.11E-08 7.675927289 0.121651477 SQIDVALS(ph)QDSTYQGER ddPTM_A459_MK2206_30min_R2 1 SQIDVALSQDSTYQGER 17 0 Q92900-2;Q92900 Q92900-2 UPF1 Regulator of nonsense transcripts 1 1 SQIDVALS(0.942)QDS(0.057)T(0.001)YQGER 199.91 5.75E-08 61845000 96070 109390 101090 124620 109910 110560 121640 88955 94488 97105 TRUE FALSE 103425.1931 103957.8517 104460.2901 114438.1474 105594.3811 114767.4383 105668.5219 100581.7239 102706.3954 93936.4718 1.10101211 1.106682524 1.112031229 1.218250432 1.124104186 1.221755896 1.12489345 1.070741981 1.093360156 1 16.51939779 -8.372251942 1.090533213 1.006430937 1.145964879 0.498813942 0.04370482 0.417691686 1.061113892 0.043032382 0.014150029 4.24E-09 8.372251942 0.139533942 SQIDVALSQDS(ph)TYQGER ddPTM_A459_MK2206_30min_R1 2 SQIDVALSQDSTYQGER 17 0 Q92900-2;Q92900 Q92900-2 UPF1 Regulator of nonsense transcripts 1 1 SQIDVALS(0.119)QDS(0.88)TYQGER;SQIDVALS(0.002)QDS(0.998)TYQGER 254.02 6.02E-31 25456000 7938.4 8662 8141.8 7225 8257.6 8129 8375.4 7117 6786.1 6401 TRUE FALSE 7263.197394 8098.102226 7589.1573 7781.470752 7928.682306 8589.256955 7816.692348 7054.776819 7491.539379 7194.004205 1.009618175 1.125673824 1.054928116 1.081660579 1.102123669 1.193946613 1.086556544 0.980646747 1.041358771 1 12.81257929 -7.693279961 6.898594895 1.008540118 1.09748522 0.414901051 0.046795608 0.206891249 16.87254004 0.022813765 0.012972929 2.03E-08 7.693279961 0.088945102 SQIDVALSQDS(ph)TYQGER ddPTM_A459_MK2206_30min_R2 4 SQIDVALSQDSTYQGER 17 0 Q92900-2;Q92900 Q92900-2 UPF1 Regulator of nonsense transcripts 1 1 SQIDVALS(0.274)QDS(0.726)TYQGER;SQIDVALS(0.299)QDS(0.701)T(0.001)YQGER;S(0.003)QIDVALS(0.202)QDS(0.795)TYQGER;SQIDVALS(0.165)QDS(0.834)T(0.001)YQGER 290.18 9.57E-76 123184100 118863 146952 123109 154143 153609 152788 149262 120921 131280 128454 TRUE FALSE 127963.2427 139654.5774 127213.3926 141549.0238 147577.5388 158602.4544 129663.7201 136725.7899 142698.4971 124262.5565 1.029781185 1.123866926 1.023746784 1.139112439 1.187626772 1.27634952 1.043465737 1.100297577 1.148362798 1 16.92303212 -1.834585497 18.77105243 1.114230413 0.113485113 0 0.081924317 0 0 0.019053861 0 0.014635734 1.834585497 -1.000745301 SQIHDIVLVGGS(ph)TR ddPTM_A459_MK2206_30min_R2 2 SQIHDIVLVGGSTR 14 0 P11142;E9PKE3;P11142-2;E9PN89;E9PNE6;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 SQIHDIVLVGGS(0.746)T(0.254)R;SQIHDIVLVGGS(0.733)T(0.267)R 108.12 0.0032983 9103000 53047 77522 57235 111021 67973 90030 102805 71615 54052 67306 TRUE FALSE 57108.31911 73672.37021 59143.18633 101950.2292 65304.03848 93456.15474 89306.58001 80975.32639 58753.34526 65109.81073 0.877107743 1.131509513 0.908360594 1.565819775 1.00298308 1.435362101 1.371630158 1.243673196 0.902373154 1 15.99058732 SQIHDIVLVGGSTR ddPTM_A459_MK2206_30min_R1 3 SQIHDIVLVGGSTR 14 0 P11142;E9PKE3;P11142-2;E9PN89;E9PNE6;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ;; 116.86 0.0036374 69927000 17429.1 14335.3 15536.5 13433.5 21261.2 17676.6 19656.4 16960.9 14014.7 12604.5 FALSE TRUE 15946.66352 13402.06936 14481.92567 14468.1505 20414.32138 18677.43382 18345.15742 16812.61264 15471.57822 14166.04062 1.125696583 0.946070234 1.022298754 1.021326346 1.441074605 1.318465358 1.295009517 1.186825105 1.092159668 1 13.79014896 -6.205081806 24.35947921 1.240045157 1.022467172 0.371487144 0.121820342 216.6791945 93655.01772 0.036265935 0.046819104 6.24E-07 6.205081806 -0.217577984 SQIHDIVLVGGSTR ddPTM_A459_MK2206_30min_R2 2 SQIHDIVLVGGSTR 14 0 P11142;E9PKE3;P11142-2;E9PN89;E9PNE6;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ; 115.1 0.0039991 36151000 100629 182322 134778 199685 182028 232000 209680 153833 174406 134498 FALSE TRUE 108333.2336 173268.1546 139271.4313 183370.0967 174880.6661 240828.9226 182148.7641 173939.5013 189575.5186 130109.3413 0.83263225 1.331711873 1.070418387 1.409353817 1.344105384 1.850973344 1.399966846 1.336871739 1.457047717 1 16.98936502 -4.224496093 0.789142766 1.425458547 3.56E-14 0.3329733 0.218466627 6.273286817 1.610617038 0.080203211 9.649884253 5.96E-05 4.224496093 -1.425458547 SQLDDHPES(ph)DDEENFIDANDDEDMEK ddPTM_A459_MK2206_30min_R1 2 SQLDDHPESDDEENFIDANDDEDMEK 26 0 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 SQLDDHPES(1)DDEENFIDANDDEDMEK;S(0.001)QLDDHPES(0.999)DDEENFIDANDDEDMEK 130.81 3.90E-09 58537000 4541 5258.1 5638.5 3761.6 3241.4 4152.9 5467.7 4143.8 6179.6 7501.6 TRUE FALSE 4154.764104 4915.796734 5255.77433 4051.319084 3112.288174 4388.033609 5102.959709 4107.571193 6821.991534 8430.954842 0.492798761 0.583065243 0.623390165 0.480529093 0.369150142 0.52046698 0.605264742 0.487201185 0.809160013 1 13.04148032 -8.451095218 2.904259331 0.998310197 0.521494817 0.834809881 0.070704856 0.096392417 1.692074664 0.073446998 0.019744942 3.54E-09 8.451095218 -0.47681538 SQLDDHPES(ph)DDEENFIDANDDEDMEK ddPTM_A459_MK2206_30min_R2 5 SQLDDHPESDDEENFIDANDDEDMEK 26 0 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 SQLDDHPES(1)DDEENFIDANDDEDMEK;SQLDDHPES(1)DDEENFIDANDDEDMEK;S(0.003)QLDDHPES(0.997)DDEENFIDANDDEDMEK;SQLDDHPES(1)DDEENFIDANDDEDMEK;S(0.004)QLDDHPES(0.996)DDEENFIDANDDEDMEK 113.23 7.96E-09 30847400 211708.3 170600.3 182255 183953 152190.7 138520.7 214539.2 161676.3 125310.6 226398.7 TRUE FALSE 227916.8502 162128.5372 188331.2907 168923.4515 146214.9284 143792.2023 186369.9453 182807.9475 136209.8895 219011.329 1.040662377 0.74027466 0.859915748 0.771300061 0.667613539 0.656551435 0.850960296 0.834696307 0.621930793 1 17.74064597 -4.757551896 24.94975799 0.770336425 1.040662777 0.34284795 0.108554187 122.4798151 785958.2835 0.02603832 0.191839755 1.75E-05 4.757551896 0.270326351 SQLPTLEQDGGTQNPVS(ph)SPGMSQELR ddPTM_A459_MK2206_30min_R2 2 SQLPTLEQDGGTQNPVSSPGMSQELR 26 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8;H0YCI3;P46937-4 P46937-6 YAP1 Transcriptional coactivator YAP1 1 SQLPTLEQDGGTQNPVS(0.702)S(0.286)PGMS(0.012)QELR;SQLPTLEQDGGTQNPVS(0.574)S(0.42)PGMS(0.005)QELR 158.25 4.20E-14 12168100 23863.5 29207.2 27940 31117 32762 25870.5 25413 18794.1 22566 28411 TRUE FALSE 25690.50791 27756.81292 28871.50565 28574.64156 31475.59926 26855.02001 22076.24257 21250.5534 24528.74989 27483.9514 0.934745792 1.009928031 1.050485981 1.03968462 1.145235589 0.977116413 0.803241217 0.773198624 0.892475377 1 14.74630182 -7.091664501 4.884128206 0.850081473 1.037855477 0.526284716 0.074712181 0.16336843 6.447187761 0.029123171 0.022577113 8.10E-08 7.091664501 0.187774004 SQLPTLEQDGGTQNPVSS(ph)PGMSQELR ddPTM_A459_MK2206_30min_R1 1 SQLPTLEQDGGTQNPVSSPGMSQELR 26 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8;H0YCI3;P46937-4 P46937-6 YAP1 Transcriptional coactivator YAP1 1 SQLPTLEQDGGTQNPVS(0.237)S(0.762)PGMS(0.001)QELR 185.47 1.02E-23 8790300 1643.1 1859.4 1850.3 1726.6 2109.5 1525.9 1793.7 1647.9 1417.4 1071.4 TRUE FALSE 1503.345717 1738.352722 1724.706791 1859.583031 2025.474148 1612.295139 1674.045546 1633.492584 1564.743802 1204.133121 1.248487971 1.443654935 1.432322358 1.544333429 1.682101516 1.338967521 1.390249564 1.356571426 1.299477421 1 10.23377918 -8.753518115 0.791035231 0.999670459 1.458292897 0.60110785 0.10850849 0.692034665 0.877196619 0.113628103 0.040380562 1.76E-09 8.753518115 0.458622438 SQLQALHIGLDSS(ph)SIGSGPGDAEADDGFPESR ddPTM_A459_MK2206_30min_R1 1 SQLQALHIGLDSSSIGSGPGDAEADDGFPESR 32 0 E9PF63;O75116;Q14DU5 E9PF63 ROCK2 Rho-associated protein kinase 2 1 SQLQALHIGLDS(0.101)S(0.536)S(0.363)IGSGPGDAEADDGFPESR 131.56 5.93E-19 12060000 1949.3 1860.1 2056 1724.6 2756.4 2268.5 2382.8 2175.1 1448.6 1481 TRUE FALSE 1783.501799 1739.007152 1916.444448 1857.428991 2646.606751 2396.94051 2223.84776 2156.08333 1599.187154 1664.477461 1.071508531 1.04477663 1.151379032 1.115923186 1.590052622 1.440055853 1.336063607 1.295351472 0.960774292 1 10.70085362 -6.036554278 24.83821051 1.302015489 1.092922415 0.1756439 0.178066525 803.9720074 546288.396 0.053832575 0.069523289 9.19E-07 6.036554278 -0.209093074 SQLQALHIGLDSS(ph)SIGSGPGDAEADDGFPESR ddPTM_A459_MK2206_30min_R2 2 SQLQALHIGLDSSSIGSGPGDAEADDGFPESR 32 0 E9PF63;O75116;Q14DU5 E9PF63 ROCK2 Rho-associated protein kinase 2 1 SQLQALHIGLDS(0.123)S(0.437)S(0.437)IGS(0.002)GPGDAEADDGFPESR;SQLQALHIGLDS(0.127)S(0.514)S(0.35)IGS(0.009)GPGDAEADDGFPESR 101.22 2.09E-08 6792300 24192.5 32280.9 25897.6 34424.6 31666.1 34189.9 33262.3 24891.5 27859.8 28240.4 TRUE FALSE 26044.6964 30677.87745 26761.01306 31612.00006 30422.7298 35491.0206 28894.92005 28144.90452 30282.99505 27318.91806 0.953357536 1.122953602 0.979578071 1.157146853 1.113614007 1.299137123 1.057689034 1.030234962 1.108499062 1 14.73761273 -1.944966363 18.99741241 1.089638413 0.155631783 0 0.096828657 0 0 0.022221075 0 0.011350987 1.944966363 -0.93400663 SQLQALHIGLDSSSIGS(ph)GPGDAEADDGFPESR ddPTM_A459_MK2206_30min_R2 1 SQLQALHIGLDSSSIGSGPGDAEADDGFPESR 32 0 E9PF63;O75116;Q14DU5 E9PF63 ROCK2 Rho-associated protein kinase 2 1 SQLQALHIGLDS(0.047)S(0.131)S(0.131)IGS(0.691)GPGDAEADDGFPES(0.001)R 53.505 0.0019743 5176600 7425.5 11649 8511.5 13934 12967 11344 9900.5 9048.1 10333 7967.7 TRUE FALSE 7994.001989 11070.5276 8795.269162 12795.54763 12457.85043 11775.70387 8600.552457 10230.71774 11231.74566 7707.714602 1.037142967 1.436291842 1.141099485 1.660096188 1.616283304 1.527781512 1.115836912 1.327334789 1.457208296 1 12.91208744 -10.95507959 3.003306493 0.992596503 1.375939704 0.228482974 0.202919175 55263232.12 65413277 3465483.052 0.054073403 1.11E-11 10.95507959 0.383343202 SQMS(ph)PQGLR ddPTM_A459_MK2206_30min_R1 1 SQMSPQGLR 9 0 P16144-4;P16144-2;P16144-3;P16144;P16144-5 P16144-4 ITGB4 Integrin beta-4 1 SQMS(1)PQGLR 87.616 0.038965 0 451.32 382.73 425.72 292.87 319.59 309.82 368.58 526.36 409.42 333.05 TRUE FALSE 412.932864 357.8142074 396.8233125 315.4268981 306.8600536 327.3617407 343.9927007 521.75809 451.9806741 374.3107484 1.103181957 0.95592822 1.060144049 0.842687258 0.819800273 0.874572109 0.919003 1.393916932 1.20750119 1 8.548092666 -7.741105824 24.99909366 1.225531788 0.933810795 0.48521895 0.122355859 174.807821 214917.9546 0.058282072 0.033597017 1.82E-08 7.741105824 -0.291720993 SQNIVTDSS(ph)SLSAEAIR ddPTM_A459_MK2206_30min_R1 1 SQNIVTDSSSLSAEAIR 17 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 SQNIVT(0.003)DS(0.231)S(0.376)S(0.376)LS(0.014)AEAIR 114.56 0.0017001 5699700 1931 2074.5 1794.9 1661.2 1812.9 1890.9 2084.1 1371.3 1599.7 1571.6 TRUE FALSE 1766.75831 1939.449673 1673.067189 1789.145912 1740.688354 1997.961124 1945.073492 1359.310869 1765.99454 1766.301673 1.000258527 1.098028555 0.947214858 1.012933373 0.985498899 1.131155088 1.101212506 0.769580242 0.999826115 1 10.78651605 -7.734486023 24.99999103 0.913527053 1.038605233 0.302237253 0.080600339 236.9856348 219811.0223 0.037222441 0.021483178 1.84E-08 7.734486023 0.125078181 SQNIVTDSSS(ph)LSAEAIR ddPTM_A459_MK2206_30min_R1 1 SQNIVTDSSSLSAEAIR 17 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 SQNIVTDS(0.003)S(0.235)S(0.76)LS(0.001)AEAIR 176.39 3.95E-09 0 1653.4 1843.5 1532.2 1238.4 1544.8 1583.7 1522.9 1501.2 1185.1 1080.3 TRUE FALSE 1512.769648 1723.487815 1428.198533 1333.781783 1483.267345 1673.367725 1421.31012 1488.075167 1308.295386 1214.13572 1.245964206 1.419518252 1.176308801 1.098544224 1.22166519 1.378237785 1.170635289 1.225625062 1.077552834 1 10.24571398 -14.52287875 0.108528733 0.208251162 1.370201393 0.415276397 0.093617274 182.4093465 1.315884774 31.571811 1.301360136 3.00E-15 14.52287875 1.161950231 SQNIVTDSSS(ph)LSAEAIR ddPTM_A459_MK2206_30min_R2 3 SQNIVTDSSSLSAEAIR 17 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 SQNIVTDS(0.017)S(0.215)S(0.763)LS(0.005)AEAIR;SQNIVTDS(0.003)S(0.223)S(0.773)LS(0.001)AEAIR;SQNIVT(0.001)DS(0.03)S(0.091)S(0.876)LS(0.002)AEAIR 168.62 3.83E-06 0 45875.3 59162 46769 56690 57761 52542 48748 43634.3 46437 44056 TRUE FALSE 49387.54824 56224.10111 48328.25512 52058.24566 55493.01291 54541.52263 42347.32904 49337.45283 50476.00632 42618.45633 1.158830059 1.319243022 1.133974791 1.221495337 1.302088759 1.279762979 0.993638266 1.157654619 1.184369653 1 15.37919072 -8.536096335 0.411996776 0.994515416 1.239290775 0.356488003 0.086378183 1.562262647 0.689153532 0.135171658 0.069720595 2.91E-09 8.536096335 0.244775359 SQNRPQGQSTQPSNAAGTNTTSAS(ph)TPR ddPTM_A459_MK2206_30min_R2 3 SQNRPQGQSTQPSNAAGTNTTSASTPR 27 1 Q9UHD9 Q9UHD9 UBQLN2 Ubiquilin-2 1 SQNRPQGQSTQPSNAAGT(0.006)NT(0.016)T(0.016)S(0.043)AS(0.743)T(0.175)PR;SQNRPQGQSTQPSNAAGT(0.007)NT(0.007)T(0.007)S(0.028)AS(0.475)T(0.475)PR;SQNRPQGQSTQPSNAAGT(0.003)NT(0.003)T(0.011)S(0.109)AS(0.437)T(0.437)PR 117.66 4.55E-12 2755820 833.75 1298.24 1178.02 655.4 601.24 935.86 477.58 659.5 452.84 0 TRUE FALSE 897.582541 1233.771289 1217.294599 601.8517235 577.6322966 971.4748081 414.8731723 745.6989144 492.2272047 0 0 SQNRPQGQSTQPSNAAGTNTTSAST(ph)PR ddPTM_A459_MK2206_30min_R1 1 SQNRPQGQSTQPSNAAGTNTTSASTPR 27 1 Q9UHD9 Q9UHD9 UBQLN2 Ubiquilin-2 1 SQNRPQGQSTQPSNAAGTNTT(0.001)S(0.009)AS(0.101)T(0.888)PR 87.704 6.49E-05 1427000 214.1 212.67 133.94 64.19 159.8 225.84 274.15 189.58 0 0 TRUE FALSE 195.8896707 198.8251443 124.848526 69.13392492 153.4348276 238.6268656 255.8619537 187.922522 0 0 0 SQNRPQGQSTQPSNAAGTNTTSAST(ph)PR ddPTM_A459_MK2206_30min_R2 1 SQNRPQGQSTQPSNAAGTNTTSASTPR 27 1 Q9UHD9 Q9UHD9 UBQLN2 Ubiquilin-2 1 SQNRPQGQSTQPSNAAGTNT(0.001)T(0.002)S(0.007)AS(0.48)T(0.51)PR 112.88 6.33E-10 1545500 745.67 485.84 0 1383.4 1389.2 595.16 1456.2 0 974.06 1355.7 TRUE FALSE 802.7590685 461.7138921 0 1270.371795 1334.653028 617.8092308 1264.999191 0 1058.781978 1311.46362 0.612109292 0.352060008 0 0.968667202 1.017682082 0.471083773 0.964570554 0 0.807328516 1 10.35696207 -5.767748544 24.99994773 0.714222175 0.324456786 0.258831758 0.326779813 222.4051942 881279.9963 0.092747129 0.141456042 1.71E-06 5.767748544 -0.389765389 SQPAPVS(ph)PQQK ddPTM_A459_MK2206_30min_R1 1 SQPAPVSPQQK 11 0 Q13118-2;Q13118 Q13118-2 KLF10 Krueppel-like factor 10 1 SQPAPVS(1)PQQK 116.9 0.0047698 0 3782 3272 3465.4 2580.9 3810 3560.6 3663.2 3177 2989 3234.2 TRUE FALSE 3460.32104 3058.992205 3230.178303 2779.681365 3658.239632 3762.198095 3418.834612 3149.223824 3299.717246 3634.877113 0.951977449 0.841566884 0.888662313 0.76472499 1.00642732 1.035027589 0.940564015 0.866390727 0.907793343 1 11.82769088 -6.280499692 24.99028929 0.955529563 0.862215993 0.362802673 0.063264526 1019.508615 1336691.262 0.020913094 0.023751247 5.24E-07 6.280499692 -0.09331357 SQPAPVS(ph)PQQK ddPTM_A459_MK2206_30min_R2 3 SQPAPVSPQQK 11 0 Q13118-2;Q13118 Q13118-2 KLF10 Krueppel-like factor 10 1 SQPAPVS(1)PQQK;SQPAPVS(1)PQQK;S(0.002)QPAPVS(0.998)PQQK 127.36 0.0029832 45570100 91363 100115 90339 106721 104260 86880 113808 80124 92080 99519 TRUE FALSE 98357.82153 95143.43468 93350.85717 98001.55292 100166.2285 90186.27928 98864.87289 90596.48191 100088.952 96271.70318 1.021669071 0.988280373 0.969660389 1.017968413 1.040453479 0.93678907 1.026935949 0.941049955 1.039650787 1 16.55482419 -6.71379213 24.9999903 0.987577793 1.005000137 0.063040867 0.03520049 393.2351752 206324.7852 0.01111339 0.011113355 1.93E-07 6.71379213 0.017422343 SQPDPVDT(ph)PTSSKPQSK ddPTM_A459_MK2206_30min_R1 2 SQPDPVDTPTSSKPQSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 SQPDPVDT(0.974)PT(0.021)S(0.004)SKPQSK;S(0.001)QPDPVDT(0.964)PT(0.026)S(0.009)S(0.001)KPQSK 96.379 0.0083285 12406600 7112 7289.4 5718.9 5723.8 5607 5654.5 5011.3 4708.5 4830.4 3640.4 TRUE FALSE 6507.087053 6814.858735 5330.717002 6164.648068 5383.661317 5974.652903 4677.005321 4667.334081 5332.537366 4091.400236 1.590430336 1.665654383 1.302907732 1.506733077 1.315848122 1.46029539 1.143130726 1.140766929 1.303352656 1 11.99837896 -1.522878745 0.123447996 0.876892659 3.365848207 0.722431017 0.106457977 45.8351606 0.388357665 0.659445461 19.68752124 0.03 1.522878745 2.488955548 SQPDPVDT(ph)PTSSKPQSK ddPTM_A459_MK2206_30min_R2 2 SQPDPVDTPTSSKPQSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 SQPDPVDT(0.913)PT(0.066)S(0.015)S(0.006)KPQSK;SQPDPVDT(0.745)PT(0.217)S(0.03)S(0.007)KPQS(0.001)K 89.866 0.012869 37789000 124532 108937 95267 130973 103929 85467 138831 104185 60353 98028 TRUE FALSE 134066.2657 103527.347 98443.15423 120272.0869 99848.22526 88719.50657 120602.3229 117802.3372 65602.39485 94829.35439 1.413763349 1.091722575 1.038108451 1.268300177 1.052925288 0.935570079 1.271782601 1.242256029 0.691794174 1 16.53304609 -4.761900835 6.271192321 1.080134 1.424323638 0.277618968 0.167049385 0.173969449 29.41616435 0.04056073 0.256811916 1.73E-05 4.761900835 0.344189639 SQPLTS(ph)PESR ddPTM_A459_MK2206_30min_R1 2 SQPLTSPESR 10 0 P46939;P46939-2 P46939 UTRN Utrophin 1 SQPLT(0.374)S(0.626)PESR;SQPLT(0.389)S(0.61)PESR 147.33 0.00082892 18499200 12783.2 11933.8 11936.7 10802.6 12179.6 10924.6 13012.7 10981.6 10278.6 9426.8 TRUE FALSE 11695.92171 11156.90745 11126.47006 11634.61812 11694.46074 11543.14141 12144.64653 10885.58903 11347.09725 10594.66315 1.103944651 1.053068634 1.050195735 1.09815838 1.103806754 1.089524154 1.146298504 1.027459663 1.071020106 1 13.3710501 -8.609476407 1.253282924 1.002065873 1.087277512 0.403892493 0.031353734 0.587563483 1.972538566 0.030444619 0.00933427 2.46E-09 8.609476407 0.085211639 SQPVT(ph)PEK ddPTM_A459_MK2206_30min_R2 1 SQPVTPEK 8 0 P54274;P54274-2 P54274 TERF1 Telomeric repeat-binding factor 1 1 S(0.039)QPVT(0.961)PEK 107.34 0.031201 32261000 107320 89907 96037 90895 86624 70060 108180 93278 67954 115070 TRUE FALSE 115536.5017 85442.34912 99238.82565 83468.58774 83222.70651 72726.18239 93975.83605 105469.7549 73864.51609 111315.2753 1.037921358 0.767570748 0.891511299 0.749839476 0.747630604 0.653335153 0.844231268 0.947486808 0.663561365 1 16.76429206 -4.756513103 24.97870633 0.800922955 1.037921725 0.286446962 0.108814905 191.7031693 971918.4732 0.026202541 0.21075361 1.75E-05 4.756513103 0.23699877 SQQQPT(ph)PVTPK ddPTM_A459_MK2206_30min_R2 4 SQQQPTPVTPK 11 0 O95251;O95251-4;O95251-2 O95251 KAT7 Histone acetyltransferase KAT7 1 S(0.031)QQQPT(0.967)PVT(0.002)PK;SQQQPT(0.949)PVT(0.051)PK;SQQQPT(0.918)PVT(0.081)PK;SQQQPT(0.953)PVT(0.047)PK 195.72 4.83E-05 473727000 504216 552868 524361 451882 527140 371785 608703 448291 369943 535805 TRUE FALSE 542819.1646 525413.3791 541842.934 414961.7951 506441.8349 385933.5387 528779.5649 506884.1729 402119.9734 518321.7267 1.047262996 1.013681951 1.045379551 0.800587306 0.977080081 0.744582985 1.020176345 0.977933486 0.775811533 1 18.98348834 -5.733932338 24.99937176 0.900345322 1.033265658 0.30937719 0.093084437 267.6154276 243216.376 0.024275099 0.042032771 1.85E-06 5.733932338 0.132920336 SQQQPTPVT(ph)PK ddPTM_A459_MK2206_30min_R1 2 SQQQPTPVTPK 11 0 O95251;O95251-4;O95251-2 O95251 KAT7 Histone acetyltransferase KAT7 1 SQQQPT(0.487)PVT(0.513)PK;SQQQPT(0.216)PVT(0.784)PK 195.94 4.64E-05 162806000 17008.2 20478 18949.9 17400.3 13101.2 12667.3 13921.1 15373.5 15634.3 14239 TRUE FALSE 15561.56328 19144.87848 17663.63359 18740.47412 12579.35146 13384.51158 12992.44882 15239.09111 17259.54143 16003.03482 0.972413261 1.19632799 1.103767741 1.171057511 0.786060369 0.836373334 0.811874058 0.952262573 1.078516771 1 13.9660579 -6.251705855 24.99447717 0.899788563 1.116485381 0.48842184 0.099847721 579.2143635 1487349.756 0.030586762 0.038988789 5.60E-07 6.251705855 0.216696819 SQQQQS(ph)LMESMQPGK ddPTM_A459_MK2206_30min_R2 1 SQQQQSLMESMQPGK 15 0 A8MVX0;A8MVX0-2 A8MVX0 ARHGEF33 Rho guanine nucleotide exchange factor 33 1 SQQQQS(1)LMESMQPGK 88.706 0.031713 0 13695 20721 18237 15797 15154 14346 18322 19094 18074 18432 TRUE FALSE 14743.49973 19692.02527 18845.01248 14506.33457 14558.97782 14891.94708 15916.29939 21589.65136 19646.04385 17830.56535 0.826866644 1.104397134 1.056893716 0.813565598 0.816518015 0.835192087 0.89264132 1.210822592 1.101818336 1 14.12206483 -7.748051377 24.9928756 1.117240346 0.910184203 0.418866395 0.106285018 222.0763696 414576.3708 0.054692258 0.031349059 1.79E-08 7.748051377 -0.207056143 SQQSSGRT(ph)SGSDDPGICSNTDSTQAQVLLGK ddPTM_A459_MK2206_30min_R2 3 SQQSSGRTSGSDDPGICSNTDSTQAQVLLGK 31 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.005)QQS(0.058)S(0.058)GRT(0.252)S(0.208)GS(0.164)DDPGICS(0.232)NT(0.013)DS(0.005)T(0.005)QAQVLLGK;S(0.023)QQS(0.047)S(0.112)GRT(0.358)S(0.358)GS(0.1)DDPGICS(0.001)NTDSTQAQVLLGK;S(0.056)QQS(0.165)S(0.138)GRT(0.211)S(0.211)GS(0.211)DDPGICS(0.005)NT(0.002)DS(0.001)T(0.001)QAQVLLGK 71.285 0.00020643 22920900 37049.7 75688 54249 60269 59420 47653 50469 31121.5 44550 32360 TRUE FALSE 39886.25352 71929.44398 56057.63458 55344.82991 57086.87224 49466.46831 43842.35968 35189.18691 48424.87847 31304.09585 1.274154466 2.297764622 1.790744408 1.767974075 1.823623097 1.580191568 1.400531096 1.124108074 1.546918292 1 14.93406381 -7.145208415 1.595955821 1.243386304 1.825365863 0.466075267 0.265638397 0.333586039 1.67916785 0.13362522 0.088906998 7.16E-08 7.145208415 0.58197956 SQQSSGRTSGSDDPGICS(ph)NTDSTQAQVLLGK ddPTM_A459_MK2206_30min_R2 1 SQQSSGRTSGSDDPGICSNTDSTQAQVLLGK 31 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.101)QQS(0.083)S(0.076)GRT(0.07)S(0.124)GS(0.165)DDPGICS(0.351)NT(0.015)DS(0.008)T(0.008)QAQVLLGK 40.456 0.037892 10441000 21294 40978 28778 33191 33816 30826 23682 15192 27110 17954 TRUE FALSE 22924.28501 38943.09211 29737.44416 30479.18913 32488.21393 31999.10503 20572.52495 17177.64656 29467.9788 17368.16245 1.319902729 2.242211415 1.712181369 1.754888533 1.87056138 1.842400146 1.184496346 0.98903074 1.696666465 1 14.0841575 -7.261491299 24.99999859 1.216634257 1.809376351 0.503498546 0.278276506 3.706087183 1783804.586 0.104986455 0.075921396 5.48E-08 7.261491299 0.592742094 SQQTLDT(ph)PK ddPTM_A459_MK2206_30min_R1 1 SQQTLDTPK 9 0 Q5T6F2;H0YDN2 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 1 SQQT(0.254)LDT(0.745)PK 102.4 0.037804 5643900 3633.8 4648.6 4225.5 3277.5 2987.5 2553.5 2806.8 2712.3 3070.2 3006.9 TRUE FALSE 3324.726228 4345.975295 3938.684833 3529.933618 2868.501549 2698.076963 2619.563493 2688.586647 3389.358277 3379.417473 0.983816369 1.286013146 1.165492238 1.04453908 0.848815387 0.79838522 0.775152379 0.79557695 1.002941573 1 11.72255887 -6.092270782 2.862483377 0.850812384 1.157084652 0.596164167 0.102140549 0.167199436 2.661951154 0.031270709 0.043695642 8.09E-07 6.092270782 0.306272268 SQQTSFQSS(ph)PCNK ddPTM_A459_MK2206_30min_R2 1 SQQTSFQSSPCNK 13 0 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 SQQTSFQS(0.013)S(0.987)PCNK 127.79 0.0018913 1955500 20956 24716 17708 21614 19270 17835 25639 20473 19978 25624 TRUE FALSE 22560.40747 23488.63938 18298.37588 19848.06706 18513.36298 18513.72342 22272.5685 23148.89139 21715.65033 24787.89098 0.91013824 0.94758523 0.738198175 0.800716248 0.746871244 0.746885785 0.89852616 0.933879022 0.876058812 1 14.59734791 -7.448938297 6.380809211 0.926534689 0.814006483 0.381667044 0.070739421 0.289541413 20.28589047 0.032855156 0.021809575 3.56E-08 7.448938297 -0.112528206 SQQTSFQSSPCNKS(ph)PK ddPTM_A459_MK2206_30min_R2 1 SQQTSFQSSPCNKSPK 16 1 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 SQQT(0.001)S(0.002)FQS(0.004)S(0.004)PCNKS(0.99)PK 62.648 0.035508 12654000 40280 67706 52806 75631 88719 85860 61715 46094 70878 54970 TRUE FALSE 43363.86777 64343.81849 54566.52568 69451.70537 85235.44628 89127.46246 53611.74637 52118.64406 77042.84032 53176.3334 0.815473068 1.210008558 1.026143064 1.3060642 1.602883103 1.676073861 1.008188097 0.980109773 1.448818213 1 15.69849668 -4.270768477 1.071549698 1.287357196 7.15E-11 0.227758354 0.243041939 7.449723295 3.302077362 0.081755789 14.20486424 5.36E-05 4.270768477 -1.287357196 SQRYS(ph)GAYGASVSDEELK ddPTM_A459_MK2206_30min_R1 1 SQRYSGAYGASVSDEELK 18 1 A0A286YEX5;C9JRZ6;F8WAR4;Q9NX63 A0A286YEX5 CHCHD3 MICOS complex subunit MIC19 1 S(0.28)QRYS(0.715)GAYGAS(0.005)VSDEELK 129.06 0.0030811 20733000 2923.6 2777.4 2858.7 3433.1 2837.3 2316.3 2442.4 3115.5 2331 1584.9 TRUE FALSE 2674.932468 2596.590755 2664.659409 3697.517957 2724.284333 2447.446904 2279.471952 3088.261512 2573.315792 1781.249377 1.501716998 1.45773567 1.495949665 2.07580028 1.529423318 1.37400576 1.279704 1.733761455 1.44466902 1 10.79867379 -6.52496565 23.30966121 1.411850703 1.634532223 0.211491398 0.235804812 54.91950515 613390.7301 0.079083893 0.079703697 2.99E-07 6.52496565 0.222681521 SQRYS(ph)GAYGASVSDEELKR ddPTM_A459_MK2206_30min_R1 2 SQRYSGAYGASVSDEELKR 19 2 A0A286YEX5;C9JRZ6;F8WAR4;Q9NX63 A0A286YEX5 CHCHD3 MICOS complex subunit MIC19 1 S(0.002)QRY(0.005)S(0.993)GAYGASVSDEELKR;S(0.066)QRY(0.052)S(0.882)GAYGASVSDEELKR 115.84 0.00053304 45411000 2746.4 2704.7 2705.8 2700.9 2903.9 2084.95 2247.63 3136.6 2070.97 1446.99 TRUE FALSE 2512.804258 2528.623538 2522.137835 2908.923786 2788.231514 2202.998067 2097.694704 3109.177037 2286.254743 1626.254045 1.545148659 1.554876094 1.55088797 1.788726549 1.714511654 1.354645711 1.289893611 1.911864291 1.405841079 1 10.66733693 -6.760548975 24.99991344 1.443030747 1.630941302 0.205377243 0.223643062 50.06029614 1405551 0.076416369 0.072245581 1.74E-07 6.760548975 0.187910555 SQS(ph)DLSSSSSR ddPTM_A459_MK2206_30min_R2 1 SQSDLSSSSSR 11 0 J3KP75 J3KP75 PHACTR2 Phosphatase and actin regulator 1 SQS(0.956)DLS(0.043)SSSSR 137.81 0.0013028 9308900 19270 23991 25110 33570 30924 26327 46945 27645 41304 35917 TRUE FALSE 20745.32602 22799.64183 25947.15487 30827.22361 29709.76838 27328.89243 40781.06511 31258.29642 44896.54726 34745.03123 0.597073172 0.656198628 0.746787496 0.887241212 0.855079628 0.786555414 1.173723657 0.899647959 1.292171734 1 15.08451906 -6.092407538 0.463793864 1.113669112 0.525775902 0.660753053 0.120404796 0.988392631 0.371124137 0.099160302 0.282473496 8.08E-07 6.092407538 -0.58789321 SQS(ph)FHTAGSLPPTGR ddPTM_A459_MK2206_30min_R2 1 SQSFHTAGSLPPTGR 15 0 Q9ULD2;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 S(0.002)QS(0.994)FHT(0.004)AGSLPPTGR 113.11 0.0034783 0 4333.4 6392.2 4971.8 6180.2 5547.3 4769.6 5401.9 4781.2 4402.5 6677.3 TRUE FALSE 4665.168436 6074.772643 5137.557331 5675.257891 5329.485129 4951.11047 4692.624041 5406.119256 4785.421492 6459.420248 0.722227113 0.940451683 0.795358892 0.878601743 0.825071744 0.766494558 0.726477588 0.836935677 0.740843808 1 12.65718897 -6.53319633 23.14391877 0.798179672 0.84058765 0 0.08895997 298.3091966 669141.7584 0.027229626 0.027268227 2.93E-07 6.53319633 0.042407978 SQS(ph)FNNYDK ddPTM_A459_MK2206_30min_R2 2 SQSFNNYDK 9 0 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1 A0A0A0MTL4 NAV2 Neuron navigator 2 1 SQS(1)FNNYDK;S(0.003)QS(0.997)FNNYDK 119.69 0.0068171 13273800 30461 39704 34937 35563 42469 32661 41813 31544 41242 34208 TRUE FALSE 32793.11758 37732.3571 36101.78214 32657.38914 40801.45367 33903.93724 36322.90287 35666.90911 44829.15461 33091.79576 0.990974253 1.140232986 1.09095869 0.986872679 1.232977925 1.024542079 1.097640731 1.077817274 1.354690901 1 15.01418596 SQS(ph)FNSIDK ddPTM_A459_MK2206_30min_R1 1 SQSFNSIDK 9 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 S(0.056)QS(0.619)FNS(0.325)IDK 101.56 0.016919 18015000 3021.5 3474.1 3508.9 3209.3 2687.5 2541 2891.5 2933.9 2848.8 2413.5 TRUE FALSE 2764.505558 3247.935459 3270.725644 3456.480842 2580.451184 2684.869224 2698.613311 2908.249222 3144.942955 2712.502601 1.019171579 1.197394413 1.205796316 1.27427743 0.951317497 0.98981259 0.994879529 1.072164584 1.159424862 1 11.40540881 -6.2659881 24.9911653 1.027982695 1.178079281 0.444369083 0.080055923 375.5565983 2063343.089 0.025744632 0.030177154 5.42E-07 6.2659881 0.150096586 SQS(ph)FNSIDK ddPTM_A459_MK2206_30min_R2 2 SQSFNSIDK 9 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 SQS(0.65)FNS(0.35)IDK;S(0.026)QS(0.972)FNS(0.002)IDK 132.56 0.0033326 42763000 103923 114754 111182 95171 118033 87620 124125 97641 103615 115450 TRUE FALSE 111879.4248 109055.4832 114888.7524 87395.22486 113398.4314 90954.4405 107827.2384 110403.014 112627.2454 111682.876 1.001759883 0.976474525 1.028705174 0.782530214 1.015360953 0.814399161 0.965476914 0.988540213 1.008455812 1 16.76904847 -7.64840488 4.216424441 0.99888603 0.935836687 0.113530788 0.077213478 0.501357682 15.84118615 0.038686591 0.021098492 2.25E-08 7.64840488 -0.063049344 SQS(ph)FSHQQPSR ddPTM_A459_MK2206_30min_R1 1 SQSFSHQQPSR 11 0 B3KNS5;Q8WVR3-2;Q8WVR3-3;Q8WVR3 B3KNS5 C7orf43 Uncharacterized protein C7orf43 1 SQS(0.999)FSHQQPSR 203.74 1.80E-05 7770100 1244.6 954.67 870.05 983.56 1474.8 951.08 1504.8 1124.1 852.67 714.69 TRUE FALSE 1138.740234 892.5208095 810.9934301 1059.313962 1416.055593 1004.929328 1404.417538 1114.272112 941.3080978 803.2311928 1.417699218 1.111163034 1.009663765 1.318815767 1.762948956 1.251108444 1.748459908 1.387237102 1.171901821 1 9.649671486 -4.451878594 21.05128814 1.332088011 4.092026209 0.008020793 0.256415537 1861.643681 575607.7622 0.064250816 10333.51081 3.53E-05 4.451878594 2.759938199 SQS(ph)FSHQQPSR ddPTM_A459_MK2206_30min_R2 1 SQSFSHQQPSR 11 0 B3KNS5;Q8WVR3-2;Q8WVR3-3;Q8WVR3 B3KNS5 C7orf43 Uncharacterized protein C7orf43 1 S(0.329)QS(0.671)FSHQQPSR 157.33 0.00055892 6573300 4886.4 5570.4 7178.1 6914 9431.6 14154 9019.5 2343.3 10616 6855 TRUE FALSE 5260.506541 5293.782036 7417.414271 6349.104083 9061.267994 14692.64039 7835.228816 2649.577356 11539.36049 6631.321911 0.793281733 0.798299661 1.118542331 0.957441694 1.366434644 2.215642761 1.181548554 0.399554929 1.740129743 1 12.69508078 -5.749592728 1.642534453 1.308043055 0.818921839 0.154672413 0.450970203 0.791585747 4.329081176 0.153017829 0.336863786 1.78E-06 5.749592728 -0.489121217 SQS(ph)GEDESMNQPGPIK ddPTM_A459_MK2206_30min_R2 2 SQSGEDESMNQPGPIK 16 0 A0A0C4DG33;O43933-2;O43933 A0A0C4DG33 PEX1 Peroxisome biogenesis factor 1 1 S(0.001)QS(0.94)GEDES(0.059)MNQPGPIK;S(0.012)QS(0.92)GEDES(0.068)MNQPGPIK 238.05 2.52E-21 21494900 84535 97266 92087 99684 92908 94755 107158 76440 74703 91628 TRUE FALSE 91007.0646 92435.91188 95157.13462 91539.49833 89259.96509 98360.96792 93088.02588 86430.97046 81200.53191 88638.18586 1.026725262 1.042845259 1.073545602 1.032732083 1.007014801 1.109690671 1.050202291 0.975098595 0.916089732 1 16.43564073 -7.822969429 4.413989899 0.955053369 1.049952839 0.594639007 0.032351749 0.137991052 5.314505598 0.018380362 0.008609906 1.50E-08 7.822969429 0.09489947 SQS(ph)GGYSDR ddPTM_A459_MK2206_30min_R2 1 SQSGGYSDR 9 0 Q14011;F6WMK9;K7EMY9;K7EPM4;K7EQR7;D6W5Y5;Q14011-3;Q14011-2 Q14011 CIRBP Cold-inducible RNA-binding protein 1 S(0.04)QS(0.953)GGYS(0.007)DR 85.672 0.03486 14337000 25673 20164 22175 20757 29556 25901 26279 40779 36381 32705 TRUE FALSE 27638.54462 19162.68508 22914.30343 19061.0867 28395.48293 26886.6807 22828.53573 46108.95532 39545.35362 31637.83853 0.873591431 0.60568882 0.724268929 0.602477527 0.897516526 0.849826725 0.721558008 1.457399034 1.249938537 1 14.94936342 -7.750013874 24.99990119 1.265251584 0.750175402 0.709784228 0.140913503 101.6026178 222315.6158 0.065758772 0.037543277 1.78E-08 7.750013874 -0.515076182 SQS(ph)GTLDGESAAWSASGEDSR ddPTM_A459_MK2206_30min_R1 1 SQSGTLDGESAAWSASGEDSR 21 0 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4 P49815 TSC2 Tuberin 1 SQS(0.974)GT(0.026)LDGESAAWSASGEDSR 243.09 2.36E-31 6300200 790.29 643.27 910.69 791.84 1149.9 999.81 1161.2 1111.2 1063 997.95 TRUE FALSE 723.0716855 601.3930061 848.8749001 852.827654 1104.097048 1056.418378 1083.738467 1101.484896 1173.502654 1121.58358 0.644688188 0.536199902 0.756853894 0.760378156 0.984409069 0.941898934 0.966257429 0.982080083 1.046290865 1 10.13132142 -5.898377053 1.114969811 0.995732776 0.579365825 0.912915264 0.048885059 0.133470719 0.332361332 0.017824304 0.040989596 1.26E-06 5.898377053 -0.416366951 SQS(ph)GTLDGESAAWSASGEDSR ddPTM_A459_MK2206_30min_R2 1 SQSGTLDGESAAWSASGEDSR 21 0 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4 P49815 TSC2 Tuberin 1 S(0.037)QS(0.925)GT(0.037)LDGESAAWSASGEDSR 204.05 4.39E-17 7488200 8590.7 12094 12078 16202 18117 22398 11931 15876 14844 15405 TRUE FALSE 9248.410597 11493.42955 12480.67449 14878.24477 17405.63555 23250.37159 10364.44537 17951.04771 16135.10429 14902.33611 0.620601396 0.771250189 0.837497853 0.998383385 1.167980337 1.560183008 0.695491317 1.204579442 1.082723149 1 13.86325089 -5.672146967 1.761834951 1.126782381 0.688318634 0.416065372 0.203004989 0.362270315 2.262001347 0.063161048 0.146761231 2.13E-06 5.672146967 -0.438463747 SQS(ph)IEQESQEK ddPTM_A459_MK2206_30min_R1 3 SQSIEQESQEK 11 0 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 S(0.003)QS(0.992)IEQES(0.006)QEK;SQS(0.995)IEQES(0.005)QEK;S(0.001)QS(0.999)IEQESQEK 231.07 2.78E-07 71614000 9062.6 9328.4 9301.8 8557.5 7993.4 7236.7 7575.4 7919.3 8123.6 7132.8 TRUE FALSE 8291.77828 8721.119464 8670.419732 9216.600133 7675.005952 7646.4357 7070.058888 7850.062395 8968.077291 8016.465114 1.034343462 1.087900882 1.081576432 1.149708756 0.957405271 0.953841324 0.881942201 0.979242382 1.118707206 1 12.9687505 -6.276094416 24.76983892 0.974422047 1.087861851 0.417783956 0.061229163 696.3548119 1176971.638 0.019888461 0.022657003 5.30E-07 6.276094416 0.113439804 SQS(ph)IEQESQEK ddPTM_A459_MK2206_30min_R2 1 SQSIEQESQEK 11 0 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 S(0.001)QS(0.994)IEQES(0.005)QEK 169.17 0.00043678 31766000 56592 61529 51362 61208 66172 50823 65393 52857 54346 62699 TRUE FALSE 60924.72703 58473.55933 53074.38344 56207.11061 63573.75479 52757.10488 56806.82055 59765.59139 59072.91684 60653.13676 1.004477761 0.964064885 0.875047628 0.926697507 1.048152794 0.869816595 0.93658504 0.985366868 0.973946608 1 15.88829464 -7.76807004 24.18595843 0.984742578 0.944550232 0.114185889 0.050846088 252.5655168 921228.3532 0.027570095 0.013738683 1.71E-08 7.76807004 -0.040192346 SQS(ph)LNIR ddPTM_A459_MK2206_30min_R1 2 SQSLNIR 7 0 O00443;A0A0C4DGF9;O00443-2 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha 1 SQS(1)LNIR;S(0.001)QS(0.999)LNIR 112.11 0.014704 63900000 7396.3 7579.7 8036.3 6819.6 8872.9 7285.1 7703.1 6700.9 6737.8 6085.8 TRUE FALSE 6767.205845 7086.260152 7490.818346 7344.846774 8519.473604 7697.576066 7189.240254 6642.314738 7438.218421 6839.754849 0.98939304 1.036040079 1.095188133 1.073846495 1.245581719 1.125416954 1.051096189 0.971133452 1.08749781 1 12.7397289 -10.8048761 4.275123234 0.999934251 1.077173078 0.087405132 0.072424316 7748466.866 19583352.63 2886.405915 0.019146926 1.57E-11 10.8048761 0.077238827 SQS(ph)LPGADSLLAKPIDK ddPTM_A459_MK2206_30min_R2 1 SQSLPGADSLLAKPIDK 17 1 H0Y4W2;F2Z2U4;Q9Y4A5-2;Q9Y4A5 H0Y4W2 TRRAP Transformation/transcription domain-associated protein 1 S(0.209)QS(0.79)LPGADS(0.001)LLAKPIDK 87.963 0.0056864 4910600 28797 27694 33699 28375 35532 28882 36284 26609 25554 38501 TRUE FALSE 31001.72046 26318.75623 34822.50784 26056.67173 34136.83515 29981.12475 31519.86722 30086.88766 27776.64073 37244.71552 0.832379038 0.70664404 0.934965064 0.699607216 0.916555132 0.804976607 0.846290991 0.807816283 0.745787432 1 15.18474812 -10.84094598 3.462352671 1.000818166 0.811821198 0.366430273 0.074714094 45147702.1 70316079.01 384953.7382 0.016873894 1.44E-11 10.84094598 -0.188996968 SQS(ph)LPHSATVTLGGTSDPSTLSSSALSER ddPTM_A459_MK2206_30min_R2 3 SQSLPHSATVTLGGTSDPSTLSSSALSER 29 0 F8WDP1;A0A0A0MRY0;Q8WUA7-3;Q8WUA7-4;Q8WUA7 F8WDP1 TBC1D22A TBC1 domain family member 22A 1 S(0.098)QS(0.402)LPHS(0.402)AT(0.098)VTLGGTSDPSTLSSSALSER;S(0.022)QS(0.725)LPHS(0.213)AT(0.04)VTLGGTSDPSTLSSSALSER;S(0.062)QS(0.311)LPHS(0.311)AT(0.311)VT(0.005)LGGTSDPSTLSSSALSER 133.8 5.89E-14 42360600 89385 136243 118556 134079 134603 115537 150091 116386 120973 129620 TRUE FALSE 96228.38433 129477.3707 122508.5979 123124.3168 129317.8099 119933.8415 130383.8714 131598.0498 131495.0129 125390.51 0.767429563 1.032593062 0.977016505 0.981926916 1.031320551 0.956482604 1.039822483 1.049505659 1.04868393 1 16.93606864 -4.758526889 24.99961308 1.012129068 0.767429233 0.848718408 0.031106262 30.53005389 262009.5463 0.008100273 0.055099492 1.74E-05 4.758526889 -0.244699835 SQS(ph)LPNSLDYTQTSDPGR ddPTM_A459_MK2206_30min_R1 2 SQSLPNSLDYTQTSDPGR 18 0 H0YLG5;Q96TC7;H0YNE5 H0YLG5;H0YNE5 RMDN3 Regulator of microtubule dynamics protein 3 1 S(0.033)QS(0.965)LPNS(0.002)LDYTQTSDPGR;SQS(0.993)LPNS(0.007)LDYTQTSDPGR 351.21 1.04E-183 22671400 3286.3 2451.26 1987.6 2489.41 2669.4 2386.42 2934.7 2510.08 2489.25 2137.14 TRUE FALSE 3006.782928 2291.682528 1852.68725 2681.14479 2563.072145 2521.537038 2738.931518 2488.134635 2748.016445 2401.905038 1.251832558 0.95411038 0.771340757 1.116257615 1.0670997 1.049807132 1.140316322 1.035900502 1.144098706 1 11.2299634 SQS(ph)LPNSLDYTQTSDPGR ddPTM_A459_MK2206_30min_R2 1 SQSLPNSLDYTQTSDPGR 18 0 H0YLG5;Q96TC7;H0YNE5 H0YLG5;H0YNE5 RMDN3 Regulator of microtubule dynamics protein 3 1 S(0.001)QS(0.995)LPNS(0.003)LDYTQTSDPGR 244.89 1.15E-25 12216000 22406 19810 19865 16806 19661 17940 24434 15486 19812 20981 TRUE FALSE 24121.42059 18826.26421 20527.28919 15432.89604 18889.01035 18622.71927 21225.78645 17510.07337 21535.21195 20296.39169 1.188458567 0.927567052 1.011376283 0.760376341 0.930658545 0.917538425 1.045791133 0.862718538 1.061036478 1 14.30893565 -4.759700791 24.99832057 0.939988976 1.188458877 0.416116077 0.085744317 42.6255196 612711.7095 0.02057682 0.128216217 1.74E-05 4.759700791 0.248469901 SQS(ph)LPTTLLSPVR ddPTM_A459_MK2206_30min_R1 1 SQSLPTTLLSPVR 13 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 S(0.003)QS(0.801)LPT(0.057)T(0.138)LLSPVR 166.52 0.00032988 63232000 2217.3 1625.2 1593.5 1941.2 1896.5 1585.2 2061.1 1721.5 1815.9 1704.9 TRUE FALSE 2028.706991 1519.399185 1485.33766 2090.71156 1820.958389 1674.952654 1923.60778 1706.449107 2004.669303 1916.115883 1.058760072 0.792957878 0.775181539 1.091119581 0.950338341 0.874139539 1.003909939 0.890577194 1.046215065 1 10.9039691 -7.411992021 0.413406804 1.00767151 0.898478412 0.071459147 0.101471471 3.210685849 1.333174995 0.114716098 0.117886009 3.87E-08 7.411992021 -0.109193099 SQS(ph)LPTTLLSPVR ddPTM_A459_MK2206_30min_R2 1 SQSLPTTLLSPVR 13 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 S(0.401)QS(0.578)LPT(0.011)T(0.011)LLSPVR 180.27 0.0001118 45272000 18641 25664 24631 24112 20940 26160 25445 22898 23826 18914 TRUE FALSE 20068.16929 24389.56308 25452.18525 22141.97247 20117.79038 27155.53713 22104.04094 25890.84722 25898.34241 18296.83773 1.096810804 1.332993353 1.391070174 1.210152967 1.099522807 1.484165599 1.208079848 1.415044917 1.415454561 1 14.15930671 -6.753498526 24.9999955 1.324459977 1.240325981 0.050393654 0.152791952 545.7226992 1718082.144 0.049455295 0.048613813 1.76E-07 6.753498526 -0.084133996 SQS(ph)LQDQPTR ddPTM_A459_MK2206_30min_R2 1 SQSLQDQPTR 10 0 Q8N4C8;Q8N4C8-2;Q8N4C8-3 Q8N4C8 MINK1 Misshapen-like kinase 1 1 S(0.01)QS(0.988)LQDQPT(0.002)R 109.44 0.010067 4850600 24935 23438 20651 25328 24695 23957 24529 22801 17200 23049 TRUE FALSE 26844.04277 22274.103 21339.49403 23258.62138 23725.35022 24868.70042 21308.31284 25781.16899 18696.02491 22296.91302 1.203935395 0.998976988 0.957060469 1.043131906 1.064064348 1.115342756 0.955662016 1.156266294 0.838502841 1 14.44455636 -4.757153825 24.77718575 1.021204701 1.203935698 0.306760174 0.084944319 142.1561698 821764.3389 0.019783042 0.150328342 1.75E-05 4.757153825 0.182730997 SQS(ph)MDAMGLSNK ddPTM_A459_MK2206_30min_R2 1 SQSMDAMGLSNK 12 0 P47736-4;F2Z357;J3KPC5;P47736;P47736-3;A0A0A0MQY8;X6R8W7;P47736-2 P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 S(0.009)QS(0.991)MDAMGLSNK 115.38 0.0052695 4874200 23022 21001 21038 21629 15599 23563 23347 23908 28820 23894 TRUE FALSE 24784.58202 19958.12088 21739.39642 19861.84151 14986.50488 24459.70648 20281.51086 27032.85769 31326.71151 23114.34074 1.072259958 0.863451876 0.94051553 0.859286524 0.648363934 1.058204807 0.877442757 1.169527524 1.355293316 1 14.49650059 -7.792294607 5.868093383 1.201856537 0.896873039 0.44929839 0.137199216 0.149730079 14.42919105 0.073153241 0.035750526 1.61E-08 7.792294607 -0.304983498 SQS(ph)MDIDGVSCEK ddPTM_A459_MK2206_30min_R1 4 SQSMDIDGVSCEK 13 0 O95155-2;O95155;O95155-4 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 SQS(1)MDIDGVSCEK;S(0.003)QS(0.991)MDIDGVS(0.006)CEK;S(0.078)QS(0.599)MDIDGVS(0.323)CEK;SQS(1)MDIDGVSCEK 225.7 7.25E-10 24382300 14572.7 13541 14488.1 13402.3 14241.3 12530.2 12978.5 12091.1 12848.9 11174.9 TRUE FALSE 13333.21534 12659.47844 13504.68814 14434.54747 13674.03886 13239.6491 12112.72795 11985.38879 14184.58914 12559.33098 1.061618279 1.007973949 1.075271299 1.149308629 1.088755356 1.054168341 0.96444054 0.954301532 1.129406428 1 13.616472 -7.041178057 7.569386899 1.008183508 1.076281366 0.235629401 0.054727313 0.399106566 64.3098517 0.021622591 0.016976649 9.10E-08 7.041178057 0.068097858 SQS(ph)NPILGSPFFSHFDGQDSYAAAVR ddPTM_A459_MK2206_30min_R1 2 SQSNPILGSPFFSHFDGQDSYAAAVR 26 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 S(0.168)QS(0.816)NPILGS(0.016)PFFSHFDGQDSYAAAVR;S(0.16)QS(0.84)NPILGSPFFSHFDGQDSYAAAVR 181.22 7.61E-22 27580000 4013.8 2574.9 3187 2247.8 4698.5 3451.7 3980.6 3435.1 2390.8 2283.1 TRUE FALSE 3672.405233 2407.273542 2970.675319 2420.925945 4511.348796 3647.132271 3715.061437 3405.067283 2639.332216 2565.947665 1.431208159 0.93816159 1.157730284 0.943482199 1.758160877 1.421358791 1.447832116 1.32702133 1.028599395 1 11.32527603 -4.46789081 22.64561848 1.249764535 4.62260772 0.048376795 0.253728737 1419.006185 630369.1982 0.063825691 18579.42691 3.40E-05 4.46789081 3.372843185 SQS(ph)NPILGSPFFSHFDGQDSYAAAVR ddPTM_A459_MK2206_30min_R2 1 SQSNPILGSPFFSHFDGQDSYAAAVR 26 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 S(0.171)QS(0.802)NPILGS(0.026)PFFSHFDGQDSYAAAVR 118.76 5.12E-09 5540200 5432.7 7492 7612.1 6696.4 6722 7619.9 6905.7 7089.7 7290 7030.3 TRUE FALSE 5848.631689 7119.958174 7865.883615 6149.282699 6458.060505 7909.880634 5998.973295 8016.348133 7924.071023 6800.901887 0.859978836 1.04691382 1.156594191 0.904186357 0.949588836 1.163063483 0.882084964 1.178718391 1.165150028 1 12.73151036 -7.784411042 24.9989373 1.12895067 1.004137574 0.195363804 0.109265831 382.3882627 416128.2912 0.058318287 0.028043138 1.64E-08 7.784411042 -0.124813096 SQS(ph)PAASDCSSSSSSASLPSSGR ddPTM_A459_MK2206_30min_R1 5 SQSPAASDCSSSSSSASLPSSGR 23 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.153)QS(0.842)PAAS(0.005)DCSSSSSSASLPSSGR;S(0.039)QS(0.934)PAAS(0.003)DCS(0.001)S(0.001)S(0.006)S(0.002)S(0.006)S(0.004)AS(0.004)LPSSGR;S(0.007)QS(0.993)PAASDCSSSSSSASLPSSGR;S(0.01)QS(0.963)PAAS(0.027)DCSSSSSSASLPSSGR;S(0.002)QS(0.997)PAAS(0.001)DCSSSSSSASLPSSGR 264.1 6.28E-55 179406700 6936.59 7145.87 7445.93 6775.34 7275.56 6134.84 6997.55 6902.87 7179.69 6379.06 TRUE FALSE 6346.596595 6680.672564 6940.521017 7297.177861 6985.759039 6482.189339 6530.756207 6842.518935 7926.044468 7169.346112 0.885240648 0.931838477 0.96808285 1.017830322 0.974392773 0.904153494 0.910927734 0.954413252 1.105546356 1 12.80762583 -8.169665779 7.088825947 1.051989779 0.944465893 0.504196222 0.043443309 0.207624129 13.56276787 0.031476081 0.01171787 6.77E-09 8.169665779 -0.107523886 SQS(ph)PAASDCSSSSSSASLPSSGR ddPTM_A459_MK2206_30min_R2 4 SQSPAASDCSSSSSSASLPSSGR 23 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.02)QS(0.979)PAASDCSSSSSSASLPSSGR;S(0.003)QS(0.997)PAASDCSSSSSSASLPSSGR;S(0.043)QS(0.957)PAASDCSSSSSSASLPSSGR;S(0.012)QS(0.843)PAAS(0.145)DCSSSSSSASLPSSGR 303.04 2.91E-118 799986000 74827.2 83292.4 85712.9 95786.9 94808 91350.7 96385 83789.8 83998.7 92447 TRUE FALSE 80556.02796 79156.22053 88570.52531 87960.80386 91085.36155 94827.1149 83729.53372 94741.41455 91304.75509 89430.46196 0.900767213 0.885114745 0.990384298 0.983566471 1.018504876 1.060344684 0.936252949 1.059386393 1.020958106 1 16.44847871 -5.365284849 2.251216205 1.013493009 0.887527281 0.642520972 0.034516481 0.192429661 1.845798423 0.009528905 0.028682286 4.31E-06 5.365284849 -0.125965728 SQS(ph)PHYFR ddPTM_A459_MK2206_30min_R1 1 SQSPHYFR 8 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 S(0.029)QS(0.971)PHYFR 95.483 0.014454 24858000 3255.9 2384.8 3021.3 1981.3 3575.8 3181.1 3314.5 2802.2 2365.1 2268.3 TRUE FALSE 2978.968608 2229.549087 2816.222574 2133.900069 3433.368314 3361.211133 3093.395753 2777.700661 2610.960609 2549.314129 1.168537284 0.874568207 1.104698139 0.837048697 1.346781189 1.318476642 1.213422747 1.089587442 1.024181594 1 11.31589344 -6.259817303 24.99883084 1.179941781 0.995273102 0.257395756 0.139481699 197.8573679 3049302.92 0.042590501 0.052081329 5.50E-07 6.259817303 -0.184668678 SQS(ph)PVHLR ddPTM_A459_MK2206_30min_R2 1 SQSPVHLR 8 0 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 SQS(1)PVHLR 97.734 0.011988 0 10852 11217 9282.5 13229 11045 9543.6 12130 10666 11425 11488 TRUE FALSE 11682.83746 10659.98009 9591.973917 12148.14838 10611.3178 9906.788386 10537.31643 12060.08282 12418.72585 11113.1475 1.051262701 0.959222407 0.863119464 1.09313301 0.954843603 0.891447575 0.9481847 1.085208562 1.11748052 1 13.43997986 -7.763259627 24.99875865 1.076008435 0.963284857 0.310212807 0.069059382 54.82258671 752870.4486 0.035706914 0.018522093 1.72E-08 7.763259627 -0.112723578 SQS(ph)SDLLER ddPTM_A459_MK2206_30min_R1 1 SQSSDLLER 9 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 S(0.014)QS(0.928)S(0.058)DLLER 93.766 0.024133 8630300 3232.5 2162 2799.3 1817.6 3420.7 2916.7 3751.6 2656 2548.1 2237.8 TRUE FALSE 2957.5589 2021.253407 2609.291315 1957.591867 3284.446276 3081.841033 3501.337609 2632.778872 2812.984113 2515.035559 1.175951127 0.803667924 1.037476908 0.778355543 1.305924389 1.225366784 1.392162269 1.046815765 1.118466935 1 11.29636308 -6.269459133 24.98998306 1.196527662 0.944821379 0.360446576 0.150944927 616.2907775 1920391.159 0.045362564 0.052330872 5.38E-07 6.269459133 -0.251706283 SQS(ph)SDLLER ddPTM_A459_MK2206_30min_R2 1 SQSSDLLER 9 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 S(0.004)QS(0.954)S(0.042)DLLER 107.17 0.012746 9919200 51300 67751 59688 68976 51607 45308 68848 51747 61915 56005 TRUE FALSE 55227.56744 64386.58386 61677.96813 63340.44016 49580.64988 47032.22769 59808.1749 58510.51057 67300.25478 54177.56144 1.019380828 1.188436359 1.138441201 1.169126821 0.915151006 0.868112673 1.103928883 1.079976821 1.24221639 1 15.72540784 -6.219308136 24.96782175 1.034008651 1.133788096 0.160207499 0.105120661 954.8757649 565878.2825 0.033247907 0.042922526 6.04E-07 6.219308136 0.099779445 SQS(ph)SDTEQQS(ph)PTSGGGK ddPTM_A459_MK2206_30min_R1 1 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.013)QS(0.635)S(0.286)DT(0.073)EQQS(0.506)PT(0.474)S(0.013)GGGK 134.83 0.0095119 5980600 3951.1 4310.2 4650.7 3980.1 3622.8 3925.9 3933.3 4186.1 3255.3 3392.1 TRUE FALSE 3615.038197 4029.605197 4335.023442 4286.647992 3478.496205 4148.181065 3670.916734 4149.501369 3593.700084 3812.338957 0.948246795 1.056990273 1.137103361 1.124414182 0.912430989 1.088093454 0.962904079 1.088439778 0.942649676 1 11.89646068 -6.236144483 24.98659613 1.006149536 1.071025523 0.17283903 0.071202611 1468.050708 1450157.467 0.020792012 0.026831303 5.81E-07 6.236144483 0.064875987 SQS(ph)SDTEQQSPTSGGGK ddPTM_A459_MK2206_30min_R1 2 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.001)QS(0.72)S(0.278)DT(0.001)EQQSPTSGGGK;S(0.096)QS(0.797)S(0.021)DT(0.086)EQQSPTSGGGK 202.07 2.95E-23 0 1104.14 879.96 1037.97 995.84 1078.76 925.13 994.73 1216.57 989.49 743.94 TRUE FALSE 1010.227095 822.6744441 967.5154884 1072.539769 1035.790705 977.5100611 928.3733767 1205.933657 1092.351026 836.1049037 1.208254001 0.983936873 1.157169972 1.282781341 1.238828645 1.169123703 1.110355139 1.442323387 1.306476043 1 9.707540154 -5.529342507 8.946732176 1.232819899 1.08965515 0.140733879 0.122618544 0.197147152 165.850113 0.032827627 0.059170048 2.96E-06 5.529342507 -0.143164748 SQS(ph)SSQFR ddPTM_A459_MK2206_30min_R1 1 SQSSSQFR 8 0 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 S(0.047)QS(0.839)S(0.057)S(0.057)QFR 92.611 0.025221 14688000 1420.6 1747.9 1903.3 1477.9 1640.5 1396.8 1623.4 1741.2 576.06 1472.5 TRUE FALSE 1299.77051 1634.111392 1774.109299 1591.728114 1575.155411 1475.885609 1515.105948 1725.976872 635.9434985 1654.924417 0.785395694 0.98742358 1.072018324 0.961813179 0.951799004 0.891814511 0.915513683 1.042933958 0.38427344 1 10.69254961 -8.219506298 24.99767169 0.692135139 0.953550618 0.303303327 0.156951165 465.8746405 277723.7026 0.097254637 0.03675811 6.03E-09 8.219506298 0.261415479 SQS(ph)SSQFR ddPTM_A459_MK2206_30min_R2 2 SQSSSQFR 8 0 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 S(0.003)QS(0.478)S(0.478)S(0.042)QFR;SQS(0.852)S(0.074)S(0.074)QFR 101.38 0.017079 158004000 265984 242495 251557 283150 317154 296481 346226 327580 281760 350926 TRUE FALSE 286347.9395 230453.0509 259943.7848 260015.7392 304700.9404 307763.7922 300766.1103 370395.8308 306266.9755 339475.3134 0.84350151 0.678850691 0.765722203 0.765934161 0.897564354 0.906586665 0.885973437 1.091083258 0.902177459 1 18.37294714 -6.623386789 0.977104098 0.986073822 0.745878291 0.667860257 0.065195206 0.301342987 0.623431302 0.034274269 0.036181069 2.38E-07 6.623386789 -0.240195532 SQS(ph)TTFNPDDMSEPEFK ddPTM_A459_MK2206_30min_R1 1 SQSTTFNPDDMSEPEFK 17 0 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 SQS(0.333)T(0.333)T(0.333)FNPDDMSEPEFK 335.46 2.81E-136 29359000 4132.1 5088.3 4269.8 3587 3450 3850.9 4169.7 3084.7 4663.7 4650.2 TRUE FALSE 3780.643196 4757.050745 3979.977872 3863.271362 3312.579195 4068.93463 3891.546921 3057.730793 5148.508304 5226.301883 0.723387833 0.910213541 0.761528507 0.739197897 0.633828521 0.778549483 0.744608139 0.585065858 0.985114986 1 12.35157475 -8.309980401 13.67522903 0.992723507 0.739908636 0.614764012 0.081608722 2.186827084 613.4844957 0.080947514 0.020926033 4.90E-09 8.309980401 -0.252814871 SQS(ph)TTFNPDDMSEPEFK ddPTM_A459_MK2206_30min_R2 1 SQSTTFNPDDMSEPEFK 17 0 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.161)QS(0.736)T(0.036)T(0.067)FNPDDMSEPEFK 170.38 8.70E-07 2257400 8112.3 9357.8 9060.4 9582.9 7394.1 6042.5 9896.8 9261.6 10424 8650 TRUE FALSE 8733.383925 8893.10526 9362.469214 8799.946416 7103.770482 6272.451572 8597.338272 10472.12292 11330.66068 8367.751208 1.043695457 1.062783182 1.118875189 1.051650102 0.848946187 0.749598239 1.027437128 1.251485932 1.354086707 1 13.03062424 -7.696133973 5.294963359 1.227023041 0.979860218 0.357108588 0.132159418 0.211629071 11.26873237 0.070429089 0.038966747 2.01E-08 7.696133973 -0.247162824 SQS(ph)TTFNPDDMSEPEFKR ddPTM_A459_MK2206_30min_R1 3 SQSTTFNPDDMSEPEFKR 18 1 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.235)QS(0.711)T(0.05)T(0.004)FNPDDMSEPEFKR;S(0.129)QS(0.371)T(0.371)T(0.129)FNPDDMSEPEFKR;S(0.037)QS(0.452)T(0.452)T(0.059)FNPDDMSEPEFKR 110.16 0.00071726 36531700 4300.96 4385.2 3814.29 4467.16 4314.72 3564.47 3736.59 4076.58 3948.1 3078.83 TRUE FALSE 3935.140767 4099.722683 3555.386622 4811.221437 4142.855566 3766.287211 3487.328899 4040.938891 4358.519123 3460.258704 1.13723889 1.184802361 1.027491562 1.390422465 1.19726758 1.088440933 1.007823171 1.167814096 1.259593428 1 11.75666419 -6.755640028 24.66767362 1.109165757 1.189688066 0.125679467 0.10868273 288.8167576 1228489.825 0.03742634 0.036430742 1.76E-07 6.755640028 0.080522309 SQS(ph)TTFNPDDMSEPEFKR ddPTM_A459_MK2206_30min_R2 1 SQSTTFNPDDMSEPEFKR 18 1 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.109)QS(0.391)T(0.391)T(0.109)FNPDDMSEPEFKR 131.33 0.00027624 17375000 24856 47171 33280 44940 36080 29995 39183 33122 57516 39359 TRUE FALSE 26758.99447 44828.55673 34389.53859 41268.25824 34663.31791 31136.48074 34038.22503 37451.15912 62518.63771 38074.71905 0.702802152 1.177383782 0.90321188 1.083875581 0.910402461 0.817773092 0.89398493 0.983622731 1.641998661 1 15.21654577 -8.084766246 10.15009651 1.320305701 0.937081998 0.402738777 0.189267613 0.49228317 56.55643774 0.117898578 0.044498689 8.23E-09 8.084766246 -0.383223703 SQS(ph)WDDRGER ddPTM_A459_MK2206_30min_R1 2 SQSWDDRGER 10 1 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 SQS(1)WDDRGER;SQS(1)WDDRGER 167.84 0.0013462 12948200 9570.8 7704.8 9522.4 7648.2 9150.7 6076.4 6532.9 6650.2 5247.1 5163.5 TRUE FALSE 8756.753202 7203.21612 8876.046019 8237.265689 8786.208242 6420.440517 6097.102161 6592.058003 5792.554822 5803.193362 1.508954235 1.241250406 1.529510644 1.419436709 1.514029896 1.106363362 1.050646046 1.135936301 0.998166778 1 12.50263128 -6.819389237 6.200302226 1.062440889 1.434725909 0.834744607 0.085560091 0.07961157 6.172527642 0.029296281 0.026038737 1.52E-07 6.819389237 0.372285021 SQS(ph)WEER ddPTM_A459_MK2206_30min_R2 2 SQSWEER 7 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 S(0.093)QS(0.907)WEER;S(0.003)QS(0.997)WEER 112.85 0.01439 318000000 580200 520710 584110 650300 585830 479440 652390 413370 446510 665250 TRUE FALSE 624620.5581 494852.2986 603583.9359 597168.4098 562827.3706 497685.4252 566730.4093 467398.8783 485346.6327 643542.947 0.970596541 0.768949922 0.937907779 0.927938706 0.87457624 0.773352311 0.880641163 0.726290111 0.754179088 1 19.2956769 -6.600935934 6.43351829 0.813503384 0.895322189 0.130093713 0.087498293 0.386030187 25.37299198 0.027942864 0.027943098 2.51E-07 6.600935934 0.081818805 SQS(ph)WEERGDR ddPTM_A459_MK2206_30min_R1 1 SQSWEERGDR 10 1 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 SQS(1)WEERGDR 113.69 0.035468 45499000 9102.3 7250.4 9602.3 8901.2 9481.9 6231.8 6667.7 7956.2 4778.5 3952.3 TRUE FALSE 8328.101587 6778.397642 8950.52263 9586.771966 9104.215845 6584.639131 6222.909899 7886.639782 5275.242175 4441.940762 1.87487903 1.525999108 2.0150027 2.15823949 2.049603165 1.482378871 1.400943919 1.775494137 1.187598497 1 12.11697444 -8.061673461 0.63624487 1.006886339 1.900806201 0.618047401 0.227854024 0.533538405 0.476991637 0.242314177 0.116160389 8.68E-09 8.061673461 0.893919861 SQS(ph)WEERGDR ddPTM_A459_MK2206_30min_R2 1 SQSWEERGDR 10 1 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 SQS(1)WEERGDR 138.2 0.0078913 30469000 107920 171310 185480 207560 216390 163810 181600 143090 151480 168200 TRUE FALSE 116182.4382 162802.9945 191663.8106 190601.684 207893.4413 170043.9043 157755.7019 161792.3543 164655.4566 162711.6478 0.714038852 1.000561403 1.177935404 1.171407743 1.277680143 1.045062887 0.969541542 0.994350168 1.011946341 1 17.31195801 -10.62854392 14.53212119 0.999999606 1.050709198 0.002293557 0.144717362 0 0 0.150007007 0.036382043 2.35E-11 10.62854392 0.050709592 SQSAAVT(ph)PSSTTSSTR ddPTM_A459_MK2206_30min_R1 1 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 SQSAAVT(0.572)PS(0.333)S(0.077)T(0.018)TSSTR 242.1 3.00E-21 7478600 3970.1 3750.9 3629.6 3065.2 3017.4 3147.9 3109.7 3055.5 2754 2812.8 TRUE FALSE 3632.422147 3506.715728 3383.232865 3301.282235 2897.210569 3326.131378 2902.257587 3028.786086 3040.288155 3161.2709 1.149038555 1.109274036 1.07021289 1.044289572 0.916470198 1.052150063 0.918066714 0.958091281 0.961729713 1 11.62628895 -5.659889268 1.111897539 0.964525761 1.147383879 0.728799659 0.0394755 0.298166014 0.682316388 0.013738691 0.045083957 2.19E-06 5.659889268 0.182858118 SQSAAVT(ph)PSSTTSSTR ddPTM_A459_MK2206_30min_R2 1 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 SQS(0.011)AAVT(0.755)PS(0.039)S(0.012)T(0.012)T(0.012)S(0.077)S(0.077)T(0.005)R 102.36 0.01165 18903000 19169 20727 16910 23233 19660 20033 21684 12857 16127 19029 TRUE FALSE 20636.59338 19697.72732 17473.77096 21334.78958 18888.04962 20795.36985 18836.86475 14537.45404 17529.69731 18408.08529 1.121061374 1.070058456 0.94924435 1.158990153 1.026073561 1.12968674 1.023292996 0.789732002 0.952282491 1 14.16805195 -7.561387242 10.21009343 0.903598944 1.071787534 0.485252477 0.074245781 0.348545254 89.30540189 0.033137468 0.019141178 2.75E-08 7.561387242 0.16818859 SQSAAVTPS(ph)STTSSTR ddPTM_A459_MK2206_30min_R1 1 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 SQSAAVT(0.032)PS(0.79)S(0.085)T(0.085)T(0.007)S(0.002)STR 230.48 2.76E-15 9149800 2333.8 1930.1 1895.4 1923.4 2101.9 2243.8 2185.1 2025.4 1745.2 1422.7 TRUE FALSE 2135.298055 1804.450139 1766.745529 2071.540601 2018.176872 2370.842017 2039.335966 2007.692141 1926.619785 1598.954817 1.335433642 1.12851853 1.104937745 1.295559186 1.262185054 1.482744848 1.275418132 1.255627814 1.20492447 1 10.64291346 -8.764715886 2.010143818 1.000169909 1.265915995 0.398077415 0.098842895 1.119051062 7.334051923 0.103496384 0.028640227 1.72E-09 8.764715886 0.265746087 SQSAAVTPS(ph)STTSSTR ddPTM_A459_MK2206_30min_R2 1 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 SQS(0.002)AAVT(0.015)PS(0.435)S(0.435)T(0.113)TSSTR 242.9 1.04E-21 14270000 41247 43319 36952 37482 39152 39137 43310 34158 32107 43205 TRUE FALSE 44404.90203 41167.84145 38183.96124 34419.6007 37614.69576 40626.38596 37623.34498 38622.56788 34899.60882 41795.22439 1.062439613 0.984989124 0.913596273 0.823529511 0.899975926 0.972034163 0.900182868 0.924090454 0.835014271 1 15.35105049 -5.000176988 2.414164638 0.904382681 1.066949055 0.483778389 0.050630843 0.301341898 2.972465976 0.01345016 0.084414589 1.00E-05 5.000176988 0.162566375 SQSAS(ph)YYPVCHSK ddPTM_A459_MK2206_30min_R2 1 SQSASYYPVCHSK 13 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 S(0.254)QS(0.254)AS(0.491)Y(0.002)YPVCHSK 90.714 0.013729 2399200 15399 28178 20723 24289 20313 19625 19852 16906 18458 15772 TRUE FALSE 16577.95928 26778.72149 21413.89448 22304.511 19515.40956 20371.84313 17245.40855 19115.67225 20063.44348 15257.36093 1.086554834 1.755134562 1.403512349 1.461885257 1.279081595 1.335214079 1.130300884 1.252881959 1.315000908 1 13.89721782 -6.627474875 1.306992291 1.19755216 1.452231075 0.268163752 0.173749797 0.564959335 2.020012346 0.075191989 0.076621113 2.36E-07 6.627474875 0.254678915 SQSDLDDQHDYDSVAS(ph)DEDTDQEPLR ddPTM_A459_MK2206_30min_R2 2 SQSDLDDQHDYDSVASDEDTDQEPLR 26 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QLH1 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 SQSDLDDQHDYDS(0.1)VAS(0.717)DEDT(0.183)DQEPLR;SQSDLDDQHDYDS(0.015)VAS(0.81)DEDT(0.174)DQEPLR 136.63 2.59E-09 53992000 157428 195331 185246 194325 192852 213428 196950 146132 170449 196054 TRUE FALSE 169480.8087 185631.1466 191422.0092 178448.0259 185279.6615 221550.1521 171090.2284 165231.9541 185274.3459 189656.774 0.893618536 0.978774144 1.009307525 0.940899827 0.976920874 1.168163664 0.902104495 0.871215674 0.976892847 1 17.53303138 -4.761581949 9.171716269 0.979455399 0.893063995 0.107797003 0.074915004 0.206850992 258.1222519 0.019556134 0.111347195 1.73E-05 4.761581949 -0.086391403 SQSESS(ph)DEVTELDLSHGK ddPTM_A459_MK2206_30min_R2 1 SQSESSDEVTELDLSHGK 18 0 Q86YS7-3;Q86YS7;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7-3 C2CD5 C2 domain-containing protein 5 1 SQS(0.004)ES(0.132)S(0.467)DEVT(0.397)ELDLSHGK 105.91 0.0032876 0 6796.2 7609 5172.8 8255.4 7523 8861 10223 10007 5470 7432.3 TRUE FALSE 7316.522297 7231.148125 5345.25857 7580.907412 7227.60922 9198.211564 8880.70782 11314.94926 5945.770713 7189.78466 1.017627459 1.005753088 0.743451831 1.054399787 1.005260875 1.279344514 1.235184118 1.573753568 0.826974797 1 12.81173285 -6.647203562 4.180242596 1.221883823 0.952394686 0.220867794 0.198673532 0.285331765 8.964290027 0.065636865 0.065149143 2.25E-07 6.647203562 -0.269489137 SQSFNTDTTTSGISSMSS(ph)SPSR ddPTM_A459_MK2206_30min_R2 1 SQSFNTDTTTSGISSMSSSPSR 22 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 SQSFNTDTTTSGISSMS(0.011)S(0.626)S(0.36)PS(0.002)R 314.16 1.07E-123 18365000 30472 30762 29776 31505 25938 32424 34038 27423 27545 30518 TRUE FALSE 32804.95975 29234.40381 30768.71698 28930.94072 24919.54379 33657.91804 29568.76971 31007.28026 29940.81431 29522.20016 1.111196306 0.990251528 1.042223033 0.979972379 0.844095076 1.140088403 1.001577442 1.050303842 1.014179639 1 14.84951262 -10.00123601 15.34760846 1.000004098 1.016769843 0.004759321 0.076162711 0 0 0.072711703 0.017635178 9.97E-11 10.00123601 0.016765745 SQSFTHS(ph)PSGDPK ddPTM_A459_MK2206_30min_R1 2 SQSFTHSPSGDPK 13 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 SQSFT(0.108)HS(0.892)PSGDPK;SQSFT(0.042)HS(0.898)PS(0.06)GDPK 215.83 1.35E-07 13060400 5456.5 4040.9 5317.7 4063.1 6296.2 6059.4 8249.4 9622.1 8757 8122.2 TRUE FALSE 4992.396022 3777.836676 4956.74934 4376.040666 6045.409022 6402.477992 7699.097578 9537.974994 9667.321487 9128.439455 0.546905749 0.413853506 0.543000736 0.479385407 0.662260954 0.701377056 0.843418814 1.044863697 1.059033314 1 13.15615253 -7.154413085 0.969231794 1.062250131 0.486929313 0.947887187 0.052545548 0.108016132 0.20238696 0.036302927 0.022754299 7.01E-08 7.154413085 -0.575320818 SQSFTHS(ph)PSGDPK ddPTM_A459_MK2206_30min_R2 1 SQSFTHSPSGDPK 13 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(0.006)QS(0.37)FT(0.081)HS(0.54)PS(0.002)GDPK 149.82 0.00050901 7535700 14733 17068 14039 15976 15870 18137 22699 23082 22909 24225 TRUE FALSE 15860.96981 16220.42794 14507.05325 14670.7097 15246.86406 18827.21624 19718.59403 26098.89665 24901.58341 23434.54023 0.676820183 0.692159 0.619045781 0.626029337 0.650615028 0.803396015 0.841432938 1.113693565 1.062601748 1 14.51634887 -7.362525327 1.496520981 1.069758824 0.653102494 0.918478222 0.051114058 0.101831332 0.441571281 0.031505972 0.017187592 4.34E-08 7.362525327 -0.41665633 SQSGEDES(ph)MNQPGPIK ddPTM_A459_MK2206_30min_R1 2 SQSGEDESMNQPGPIK 16 0 A0A0C4DG33;O43933-2;O43933 A0A0C4DG33 PEX1 Peroxisome biogenesis factor 1 1 SQSGEDES(1)MNQPGPIK;SQS(0.003)GEDES(0.997)MNQPGPIK 218.34 1.13E-10 17743800 7069 6760.7 6890.9 6194.4 6754.3 5843 6840 6775.5 6120.2 6269.8 TRUE FALSE 6467.744429 6320.577201 6423.164907 6671.493761 6485.261929 6173.825611 6383.71608 6716.262518 6756.416691 7046.550159 0.917859702 0.896974698 0.91153327 0.946774466 0.92034567 0.876148679 0.905934952 0.953127753 0.958826169 1 12.7827014 -8.247422542 1.486614114 0.99533825 0.911024539 0.69993266 0.018723509 0.229082494 0.96410297 0.018915017 0.005819904 5.66E-09 8.247422542 -0.084313711 SQSGEDES(ph)MNQPGPIK ddPTM_A459_MK2206_30min_R2 2 SQSGEDESMNQPGPIK 16 0 A0A0C4DG33;O43933-2;O43933 A0A0C4DG33 PEX1 Peroxisome biogenesis factor 1 1 S(0.016)QS(0.195)GEDES(0.789)MNQPGPIK;S(0.003)QS(0.058)GEDES(0.939)MNQPGPIK 119.74 0.0062939 22101100 46885 65064 63355 61473 57665 53419 56687 52065 49882 59065 TRUE FALSE 50474.55165 61833.01637 65467.22408 56450.45926 55400.78236 55451.89748 49243.92881 58870.07427 54220.64619 57137.71389 0.883384165 1.08217519 1.14577955 0.987971961 0.969600962 0.970495557 0.861846326 1.030319036 0.94894672 1 15.80215569 -5.986020337 24.87428293 0.961993607 1.045828631 0.163537365 0.073581361 354.4895693 630744.6099 0.020810501 0.03085117 1.03E-06 5.986020337 0.083835024 SQSGT(ph)LDGESAAWSASGEDSR ddPTM_A459_MK2206_30min_R1 1 SQSGTLDGESAAWSASGEDSR 21 0 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4 P49815 TSC2 Tuberin 1 S(0.002)QS(0.099)GT(0.899)LDGESAAWSASGEDSR 252.44 8.89E-39 8007800 681.41 762.58 990.63 482.87 1199.6 1204 1152.3 1226.3 1229.9 955.51 TRUE FALSE 623.4525013 712.9359034 923.3887957 520.0607311 1151.817392 1272.16944 1075.432169 1215.578588 1357.752506 1073.885793 0.580557547 0.663884287 0.85985754 0.484279366 1.072569727 1.18464128 1.001439983 1.131944008 1.264336036 1 10.06862486 -6.341015475 6.668377019 1.117085356 0.664385786 0.794335222 0.115079787 0.109475939 7.702670754 0.035127425 0.039912325 4.56E-07 6.341015475 -0.452699571 SQSGT(ph)LDGESAAWSASGEDSR ddPTM_A459_MK2206_30min_R2 1 SQSGTLDGESAAWSASGEDSR 21 0 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4 P49815 TSC2 Tuberin 1 SQS(0.02)GT(0.98)LDGESAAWSASGEDSR 253.58 6.35E-39 7263700 8076.9 9800.5 7501 13175 12560 13851 15692 10068 12960 11338 TRUE FALSE 8695.273674 9313.821421 7751.079596 12098.56036 12066.83129 14378.10951 13631.62155 11383.92217 14087.23737 10968.04199 0.792782676 0.849178133 0.706696747 1.103073855 1.10018099 1.310909415 1.24284914 1.03791745 1.284389446 1 13.42101838 -5.85583549 4.91503032 1.169562266 0.790448283 0.741344651 0.10069564 0.100154009 4.037504387 0.028330098 0.043275629 1.39E-06 5.85583549 -0.379113983 SQSIEQES(ph)QEK ddPTM_A459_MK2206_30min_R1 1 SQSIEQESQEK 11 0 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 SQS(0.133)IEQES(0.867)QEK 135.94 0.0014566 44724000 5355.4 5637.6 5845.4 4522.1 5210.3 4049.6 4494.7 4832.4 4528.8 4026.3 TRUE FALSE 4899.895108 5270.591215 5448.630534 4870.392926 5002.762718 4278.884852 4194.866764 4790.150836 4999.584966 4525.108441 1.082823798 1.164743626 1.204088389 1.076304135 1.105556427 0.945587251 0.927020163 1.058571501 1.104854178 1 12.14373665 -6.41876588 2.246523845 1.007836637 1.143773002 0.483039969 0.060369818 0.27760294 2.760525954 0.022556103 0.025985408 3.81E-07 6.41876588 0.135936365 SQSLPHS(ph)ATVTLGGTSDPSTLSSSALSER ddPTM_A459_MK2206_30min_R1 1 SQSLPHSATVTLGGTSDPSTLSSSALSER 29 0 F8WDP1;A0A0A0MRY0;Q8WUA7-3;Q8WUA7-4;Q8WUA7 F8WDP1 TBC1D22A TBC1 domain family member 22A 1 S(0.115)QS(0.332)LPHS(0.448)AT(0.104)VT(0.001)LGGTSDPSTLSSSALSER 102.66 2.50E-08 12044000 3333.7 2449.6 3008.6 2500.7 3587.8 3254.6 3650.6 3806.4 2774.5 2560 TRUE FALSE 3050.151309 2290.130595 2804.384614 2693.304347 3444.890329 3438.872639 3407.075135 3773.121046 3062.919204 2877.152127 1.060128618 0.795971326 0.974708493 0.936100779 1.197326445 1.195234902 1.184183173 1.311408254 1.064566303 1 11.49042579 -6.258129102 24.07106071 1.177449184 0.933671939 0.52651132 0.099787387 118.4869262 861588.6363 0.02828688 0.034980323 5.52E-07 6.258129102 -0.243777245 SQSLPHSAT(ph)VTLGGTSDPSTLSSSALSER ddPTM_A459_MK2206_30min_R1 1 SQSLPHSATVTLGGTSDPSTLSSSALSER 29 0 F8WDP1;A0A0A0MRY0;Q8WUA7-3;Q8WUA7-4;Q8WUA7 F8WDP1 TBC1D22A TBC1 domain family member 22A 1 S(0.039)QS(0.372)LPHS(0.106)AT(0.403)VT(0.08)LGGTSDPSTLSSSALSER 104.15 1.01E-08 9051700 2403.6 1598.1 2706.7 1936.1 2792.7 2967.4 3245.2 2692.9 2492 2502.4 TRUE FALSE 2199.161198 1494.0634 2522.976745 2085.218757 2681.460845 3135.411624 3028.718629 2669.356259 2751.052318 2812.416204 0.781947279 0.53123837 0.897085126 0.741433204 0.953436707 1.114846238 1.07690982 0.949132726 0.978181079 1 11.4575944 -6.152588848 1.547494174 1.026432905 0.699956172 0.660502958 0.096422079 0.232610062 1.11234779 0.03462875 0.05183324 7.04E-07 6.152588848 -0.326476733 SQSLPNS(ph)LDYTQTSDPGR ddPTM_A459_MK2206_30min_R2 3 SQSLPNSLDYTQTSDPGR 18 0 H0YLG5;Q96TC7;H0YNE5 H0YLG5;H0YNE5 RMDN3 Regulator of microtubule dynamics protein 3 1 SQSLPNS(0.998)LDYTQTS(0.002)DPGR;SQS(0.001)LPNS(0.84)LDYT(0.006)QT(0.001)S(0.151)DPGR;S(0.04)QS(0.132)LPNS(0.82)LDYT(0.009)QTSDPGR 239.87 5.25E-25 39221200 117706 127039 110419 110045 108589 121973 129650 84447 103022 120053 TRUE FALSE 126717.6619 120730.428 114100.3143 101053.9715 104325.2502 126614.768 112626.7993 95484.51285 111982.6673 116135.6804 1.091117401 1.039563617 0.98247424 0.870137163 0.898304895 1.090231422 0.969786364 0.822180681 0.96423999 1 16.82545175 -5.223113367 2.496561124 0.942299491 1.081528421 0.320179589 0.069931893 0.376264606 4.425049924 0.020171728 0.072151645 5.98E-06 5.223113367 0.139228931 SQSLPNSLDYTQTS(ph)DPGR ddPTM_A459_MK2206_30min_R1 1 SQSLPNSLDYTQTSDPGR 18 0 H0YLG5;Q96TC7;H0YNE5 H0YLG5;H0YNE5 RMDN3 Regulator of microtubule dynamics protein 3 1 SQSLPNS(0.002)LDY(0.005)T(0.007)QT(0.013)S(0.973)DPGR 112.5 0.0012317 10504000 1597.3 1796 1571.3 1546.2 2072.5 1386.8 1711.7 1493.9 1764 1254.5 TRUE FALSE 1461.441247 1679.080074 1464.644534 1665.288592 1989.947936 1465.319418 1597.515616 1480.83899 1947.374113 1409.916931 1.036544221 1.190907093 1.03881619 1.181125324 1.411393744 1.039294859 1.133056552 1.050302296 1.381197764 1 10.46139445 -3.759482116 1.249401611 1.164241412 3.48E-11 0.060429949 0.135183048 51.79483209 9.538688973 0.03889362 139.6677598 0.000173987 3.759482116 -1.164241412 SQSLPT(ph)TLLSPVR ddPTM_A459_MK2206_30min_R1 1 SQSLPTTLLSPVR 13 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 S(0.001)QS(0.165)LPT(0.384)T(0.384)LLS(0.065)PVR 135.91 0.002624 58742000 2040.9 1942.2 1820.1 1387 2239.6 1844.2 1803.5 1612.2 1841.7 1485.8 TRUE FALSE 1867.310738 1815.762427 1696.556683 1493.82698 2150.39199 1948.61701 1683.191806 1598.104705 2033.151306 1669.872121 1.11823577 1.087366155 1.015980003 0.894575675 1.287758483 1.166925889 1.00797647 0.957022209 1.217549104 1 10.70552191 -3.358845901 1.980527423 1.069976992 11.78597077 0.015531822 0.115765174 1909.944421 45.93929232 0.031671743 91601.44678 0.000437677 3.358845901 10.71599377 SQSLPT(ph)TLLSPVR ddPTM_A459_MK2206_30min_R2 2 SQSLPTTLLSPVR 13 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 S(0.17)QS(0.08)LPT(0.375)T(0.375)LLSPVR;S(0.01)QS(0.079)LPT(0.455)T(0.455)LLSPVR 146.84 0.0013782 95632000 92805 134194 109996 116360 96424 120049 115289 93778 108673 97031 TRUE FALSE 99910.22215 127530.1211 113663.2117 106853.0158 92637.90927 124617.5488 100151.4158 106035.1066 118125.1811 93864.88642 1.064404656 1.358656319 1.210923659 1.13837048 0.986928263 1.327626907 1.06697424 1.129656793 1.258459746 1 16.51829795 SQSLPTTLLS(ph)PVR ddPTM_A459_MK2206_30min_R1 2 SQSLPTTLLSPVR 13 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 SQSLPTTLLS(1)PVR;SQSLPT(0.001)T(0.001)LLS(0.999)PVR 128.85 0.0017852 17606200 2324.7 2334.24 2345.48 1689.33 2387.5 2083.64 2314.1 2163.05 2056.15 1701.02 TRUE FALSE 2126.972058 2182.280552 2186.275352 1819.442489 2292.400819 2201.613896 2159.730611 2144.138682 2269.894151 1911.7552 1.112575532 1.141506272 1.143595871 0.951713111 1.19910793 1.151619149 1.12971086 1.121555041 1.187335152 1 10.90068208 SQSLPTTLLS(ph)PVR ddPTM_A459_MK2206_30min_R2 2 SQSLPTTLLSPVR 13 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 SQSLPTTLLS(1)PVR;SQSLPTTLLS(1)PVR 149.35 0.00052192 15294000 22519 25680 25918 31427 30711 29515 29020 18167 22765 30192 TRUE FALSE 24243.07195 24404.76854 26782.09318 28859.31357 29505.13183 30638.21401 25209.63914 20541.48928 24745.05855 29206.83751 0.830047825 0.835584083 0.916980251 0.988101281 1.010213167 1.049008267 0.863141692 0.703310972 0.847235122 1 14.83401853 -10.55815887 4.977010299 1.000001627 0.896976697 0.09673442 0.096960765 2.00E-06 3.87E-07 0.107213868 0.026002772 2.77E-11 10.55815887 -0.103024931 SQSNPILGS(ph)PFFSHFDGQDSYAAAVR ddPTM_A459_MK2206_30min_R2 2 SQSNPILGSPFFSHFDGQDSYAAAVR 26 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 S(0.009)QS(0.038)NPILGS(0.904)PFFS(0.048)HFDGQDSYAAAVR;S(0.096)QS(0.288)NPILGS(0.616)PFFSHFDGQDSYAAAVR 97.352 2.18E-06 5971400 7748.2 14579.2 11267.1 16709.6 14616.6 18469.4 14424.7 8933.6 13363.3 11495.9 TRUE FALSE 8341.408149 13855.21813 11642.73949 15344.37223 14042.67884 19172.26596 12530.71956 10101.25219 14525.61568 11120.78972 0.750073363 1.245884373 1.046934595 1.379791598 1.262741153 1.724002201 1.126783248 0.908321481 1.306167641 1 13.44097162 -4.760488395 24.70383232 1.232826692 0.750072719 0.296146911 0.217855304 26.86947078 697563.6928 0.055948827 0.330429591 1.74E-05 4.760488395 -0.482753973 SQSPAAS(ph)DCSSSSSSASLPSSGR ddPTM_A459_MK2206_30min_R1 1 SQSPAASDCSSSSSSASLPSSGR 23 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.001)QS(0.008)PAAS(0.84)DCS(0.074)S(0.074)S(0.003)S(0.001)SSASLPSSGR 178.47 1.22E-16 230920000 7601.1 7103.8 7425.9 6992.6 8745.8 7148.4 8614.4 7954.9 8026.6 6216.3 TRUE FALSE 6954.58653 6641.341329 6921.850598 7531.171264 8397.436266 7553.13623 8039.749094 7885.351148 8860.993793 6986.422175 0.995443212 0.950606929 0.990757562 1.077972541 1.201965191 1.081116492 1.150767717 1.128668001 1.268316396 1 12.77033811 -5.875219506 3.007302193 1.142824613 0.973254913 0.528187707 0.067219831 0.182704546 3.308596765 0.018810419 0.03033028 1.33E-06 5.875219506 -0.1695697 SQSPAAS(ph)DCSSSSSSASLPSSGR ddPTM_A459_MK2206_30min_R2 1 SQSPAASDCSSSSSSASLPSSGR 23 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.001)QS(0.029)PAAS(0.969)DCSSSSSSASLPSSGR 178.01 1.30E-16 80442000 15678 18679 22293 21108 26769 29618 22610 15498 22072 19692 TRUE FALSE 16878.31973 17751.42802 23036.23749 19383.40888 25717.91456 30745.13374 19641.27984 17523.64181 23991.78266 19049.45165 0.88602654 0.931860315 1.209286121 1.017531068 1.350060623 1.613964239 1.031067991 0.91990269 1.259447416 1 14.21746185 -5.214086281 4.72660289 1.183858566 0.899025253 0.231988058 0.193455465 0.31580473 16.0905244 0.053600628 0.147711659 6.11E-06 5.214086281 -0.284833313 SQSS(ph)DTEQQS(ph)PTSGGGK ddPTM_A459_MK2206_30min_R1 3 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.099)QS(0.375)S(0.526)DT(0.025)EQQS(0.954)PT(0.02)S(0.002)GGGK;SQS(0.065)S(0.933)DT(0.001)EQQS(0.995)PT(0.004)SGGGK;S(0.004)QS(0.07)S(0.924)DT(0.002)EQQS(0.878)PT(0.112)S(0.009)GGGK 215.49 5.02E-09 22077100 11399.59 11777.9 11313.4 10370.7 10615.98 9398.27 10150.06 11031.86 8494.69 8981.11 TRUE FALSE 10429.99501 11011.15657 10545.47793 11169.45311 10193.12304 9930.391926 9472.968017 10935.40961 9377.743424 10093.75771 1.03331141 1.090887743 1.044752433 1.106570361 1.009844235 0.983815167 0.938497662 1.083383406 0.929063654 1 13.30117574 -6.438277883 5.494060934 0.989813652 1.068424525 0.441468527 0.043584555 0.212569754 10.52529827 0.013023891 0.014683688 3.65E-07 6.438277883 0.078610873 SQSS(ph)DTEQQSPTSGGGK ddPTM_A459_MK2206_30min_R1 8 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SQS(0.076)S(0.923)DT(0.001)EQQSPTSGGGK;SQS(0.081)S(0.898)DT(0.021)EQQSPTSGGGK;SQS(0.171)S(0.733)DT(0.096)EQQSPTSGGGK;SQS(0.227)S(0.773)DTEQQSPTSGGGK;S(0.001)QS(0.127)S(0.729)DT(0.012)EQQS(0.127)PT(0.002)S(0.001)GGGK;S(0.001)QS(0.06)S(0.879)DT(0.06)EQQSPTSGGGK;SQS(0.061)S(0.918)DT(0.02)EQQSPTSGGGK;SQS(0.02)S(0.98)DTEQQSPTSGGGK 373.26 4.30E-222 428189500 20699.14 21868.47 20463.52 19540.28 19098.18 17039.39 19801.32 18795.93 16687.2 15948.93 TRUE FALSE 18938.56945 20444.82863 19074.51328 21045.27575 18337.45905 18004.14554 18480.41007 18631.59917 18421.89416 17924.80386 1.056556579 1.140588694 1.064140697 1.174086808 1.023021462 1.004426363 1.030996502 1.039431132 1.02773198 1 14.12966971 -6.299770232 23.70997395 1.022583773 1.107917683 0.622798369 0.033497996 188.4691005 116579.0996 0.009696647 0.010995259 5.01E-07 6.299770232 0.085333909 SQSS(ph)DTEQQSPTSGGGK ddPTM_A459_MK2206_30min_R2 10 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.002)QS(0.021)S(0.97)DT(0.006)EQQSPTSGGGK;SQS(0.002)S(0.821)DT(0.078)EQQS(0.09)PT(0.009)SGGGK;S(0.03)QS(0.099)S(0.871)DT(0.001)EQQSPTSGGGK;SQS(0.026)S(0.974)DTEQQSPTSGGGK;SQS(0.027)S(0.973)DTEQQSPTSGGGK;S(0.007)QS(0.23)S(0.754)DT(0.001)EQQS(0.008)PTSGGGK;SQS(0.003)S(0.966)DT(0.031)EQQSPTSGGGK;SQS(0.022)S(0.978)DTEQQSPTSGGGK;SQS(0.064)S(0.872)DT(0.064)EQQSPTSGGGK;SQS(0.049)S(0.947)DT(0.004)EQQSPTSGGGK 288.53 1.21E-111 542490690 145375.4 165703.2 148764.2 162261.2 167750.1 145030.97 181877.8 131795.4 143793.3 161968.9 TRUE FALSE 156505.4524 157474.62 153723.9242 149003.9409 161163.3882 150550.2252 157997.0264 149021.5113 156300.1813 156683.8681 0.998861302 1.005046799 0.981108815 0.95098457 1.028589543 0.960853386 1.008380941 0.951096709 0.997551205 1 17.25749712 SQSS(ph)HSYDDSTLPLIDR ddPTM_A459_MK2206_30min_R2 1 SQSSHSYDDSTLPLIDR 17 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14;O60716-27;O60716-29;O60716-25;O60716-26;O60716-31;O60716-32;O60716-30;O60716-28;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 S(0.087)QS(0.318)S(0.436)HS(0.136)Y(0.019)DDS(0.002)T(0.002)LPLIDR 68.82 0.035695 3266400 8170 9953.7 9049.1 8503.2 8375.1 12422 9520 8714.8 9337.5 7767.1 TRUE FALSE 8795.501482 9459.413732 9350.792478 7808.46136 8046.251492 12894.72791 8270.012564 9853.854282 10149.65887 7513.660163 1.17060145 1.258962147 1.244505644 1.039235365 1.070883074 1.716171298 1.100663643 1.311458606 1.350827513 1 12.87530015 -4.752212349 21.87884698 1.242532483 1.170600735 0.006480148 0.197693753 548.4625119 1299991.182 0.048584298 0.528310667 1.77E-05 4.752212349 -0.071931748 SQSS(ph)SNCSNPISVPLRR ddPTM_A459_MK2206_30min_R1 1 SQSSSNCSNPISVPLRR 17 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.002)QS(0.295)S(0.639)S(0.061)NCS(0.002)NPISVPLRR 140.68 0.00073769 0 495.28 469.44 429.81 560.16 514.86 493.34 597.29 605.94 520.19 544.78 TRUE FALSE 453.1538352 438.8793707 400.6356947 603.3036203 494.352036 521.2724845 557.4458739 600.6423305 574.265612 612.2714593 0.740119155 0.716805208 0.654343247 0.985353165 0.807406631 0.851374789 0.910455429 0.98100658 0.937926476 1 9.258027624 -5.907944942 0.365552291 0.999416106 0.608542682 0.628169107 0.071778696 1.858113387 0.359085893 0.074817549 0.298612163 1.24E-06 5.907944942 -0.390873424 SQSSDT(ph)EQQSPT(ph)SGGGK ddPTM_A459_MK2206_30min_R2 1 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.04)QS(0.036)S(0.016)DT(0.908)EQQS(0.036)PT(0.741)S(0.223)GGGK 174.87 1.47E-06 6540500 36956 40883 44710 39679 42242 38868 48219 35446 37577 46364 TRUE FALSE 39785.37977 38852.80967 46200.60908 36437.09877 40583.36683 40347.14898 41887.78738 40078.9139 40845.37954 44851.14648 0.887053797 0.866261238 1.030087583 0.81240061 0.904845696 0.899578988 0.933929022 0.893598426 0.910687524 1 15.45285724 -14.52287865 0.380170018 2.348126905 0.902406779 0.235371658 0.051964809 893.253249 6.68536574 992.7058135 0.033851097 3.00E-15 14.52287865 -1.445720126 SQSSDT(ph)EQQSPTSGGGK ddPTM_A459_MK2206_30min_R1 1 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SQS(0.001)S(0.001)DT(0.76)EQQS(0.186)PT(0.046)S(0.006)GGGK 171.26 1.72E-06 3352100 891.95 955.33 898.08 723.52 831.39 1037.5 825.15 938.14 571.29 769.06 TRUE FALSE 816.0849687 893.1378434 837.1208318 779.2456358 798.2739758 1096.242353 770.1057491 929.9379409 630.6776399 864.3369589 0.944174561 1.033321362 0.968512133 0.901553066 0.923568022 1.268304383 0.890978618 1.075897463 0.729666403 1 9.755450042 -8.245034626 24.95022071 0.864833151 1.000172211 0.167547162 0.121211989 1198.801985 1823282.101 0.07944759 0.02984712 5.69E-09 8.245034626 0.13533906 SQSSDTEQQS(ph)PTSGGGK ddPTM_A459_MK2206_30min_R1 10 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SQSS(0.004)DTEQQS(0.936)PT(0.059)SGGGK;SQSSDTEQQS(0.987)PT(0.013)SGGGK;SQSS(0.001)DT(0.006)EQQS(0.992)PT(0.001)SGGGK;SQSS(0.001)DT(0.4)EQQS(0.581)PT(0.016)S(0.001)GGGK;SQSSDTEQQS(0.999)PT(0.001)SGGGK;SQSSDTEQQS(0.994)PT(0.005)S(0.001)GGGK;SQSSDTEQQS(0.997)PT(0.003)SGGGK;SQSSDTEQQS(0.993)PT(0.006)SGGGK;SQSSDTEQQS(0.851)PT(0.147)S(0.001)GGGK;SQSSDTEQQS(0.999)PT(0.001)SGGGK 304.2 1.59E-89 451822440 24662.29 25561.73 23933.17 20758.57 22053.57 19558.73 23077.63 22052.48 14381.58 18888.37 TRUE FALSE 22564.63273 23897.65673 22308.6531 22357.39866 21175.12961 20666.12839 21538.16341 21859.67749 15876.59671 21228.40388 1.062945328 1.125739687 1.050886974 1.053183216 0.997490425 0.973513059 1.014591749 1.029737215 0.747894039 1 14.37370828 -6.639500915 0.57820904 0.922260315 1.101567117 0.398547493 0.073671464 0.941550072 0.685889006 0.058765555 0.077571961 2.29E-07 6.639500915 0.179306803 SQSSDTEQQS(ph)PTSGGGK ddPTM_A459_MK2206_30min_R2 9 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SQSSDTEQQS(0.974)PT(0.025)SGGGK;SQSSDT(0.006)EQQS(0.994)PTSGGGK;SQSSDT(0.001)EQQS(0.99)PT(0.008)SGGGK;SQS(0.001)S(0.001)DT(0.043)EQQS(0.935)PT(0.019)SGGGK;SQSSDTEQQS(0.958)PT(0.042)SGGGK;SQSS(0.018)DT(0.191)EQQS(0.784)PT(0.004)S(0.004)GGGK;SQSSDT(0.002)EQQS(0.997)PT(0.001)SGGGK;SQSSDTEQQS(0.972)PT(0.027)SGGGK;SQSSDTEQQS(0.933)PT(0.057)S(0.01)GGGK 240.68 1.28E-22 648686660 278046.2 301783.6 276865 300573.9 317015.9 272084 352733.7 276857.4 273476 326026.1 TRUE FALSE 299333.6309 286797.4653 286095.5409 276016.0509 304568.2629 282438.3473 306419.3415 313043.6128 297262.4481 315387.8951 0.949096765 0.90934836 0.90712277 0.875163743 0.965694206 0.895526911 0.971563419 0.992566987 0.942529668 1 18.26676776 -7.31794169 7.611224646 0.976353983 0.916540534 0.524283511 0.02784931 0.242151991 29.25341526 0.011360608 0.007653927 4.81E-08 7.31794169 -0.059813449 SQSSEGVSSLSS(ph)SPSNSLETQSQSLSR ddPTM_A459_MK2206_30min_R1 1 SQSSEGVSSLSSSPSNSLETQSQSLSR 27 0 O95155-2;O95155;O95155-4 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 SQSSEGVSSLS(0.037)S(0.461)S(0.461)PS(0.037)NS(0.005)LETQSQSLSR 104.5 3.06E-09 11245000 1813.8 1564.9 1581.5 1530.5 2247.9 2173.2 2053.9 1815.8 1864.1 1785.5 TRUE FALSE 1659.526785 1463.024726 1474.152186 1648.379375 2158.361383 2296.244706 1916.888079 1799.924652 2057.879866 2006.70122 0.826992464 0.729069535 0.734614686 0.821437371 1.075576853 1.144288289 0.955243391 0.896956973 1.025503869 1 10.97061011 -6.128213967 4.533889872 1.013715687 0.762667803 0.754647526 0.067005501 0.124346959 4.028944632 0.022360043 0.02945735 7.44E-07 6.128213967 -0.251047884 SQSSEGVSSLSS(ph)SPSNSLETQSQSLSR ddPTM_A459_MK2206_30min_R2 1 SQSSEGVSSLSSSPSNSLETQSQSLSR 27 0 O95155-2;O95155;O95155-4 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 S(0.009)QS(0.008)S(0.008)EGVS(0.018)S(0.016)LS(0.161)S(0.552)S(0.137)PS(0.054)NS(0.031)LET(0.003)QS(0.002)QS(0.001)LSR 47.537 0.029461 9384000 11957 10933 11650 11900 11274 11291 14969 11211 12171 14909 TRUE FALSE 12872.43711 10390.08312 12038.40519 10927.73193 10831.32611 11720.68692 13003.55232 12676.31619 13229.61158 14422.52055 0.892523402 0.720406886 0.834694958 0.757685309 0.751000914 0.812665642 0.901614407 0.878925161 0.917288454 1 13.8160357 -7.931565591 0.78415942 0.987587292 0.786135747 0.641382922 0.049733754 0.377239125 0.453049558 0.045297683 0.019420391 1.17E-08 7.931565591 -0.201451544 SQSSEGVSSLSSS(ph)PSNSLETQSQSLSR ddPTM_A459_MK2206_30min_R1 1 SQSSEGVSSLSSSPSNSLETQSQSLSR 27 0 O95155-2;O95155;O95155-4 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 SQSSEGVSSLSS(0.03)S(0.967)PS(0.002)NSLETQSQSLSR 165.6 1.54E-21 13102000 1574.2 1406.5 968.17 1079.3 1660.1 1286.1 1662.9 1617.9 1235.3 1438.7 TRUE FALSE 1440.306024 1314.936594 902.4533179 1162.427873 1593.974702 1358.917871 1551.970975 1603.754871 1363.713856 1616.937018 0.890761983 0.813226848 0.558125213 0.718907329 0.98579888 0.840427213 0.959821538 0.991847458 0.843393305 1 10.65904777 -6.255074935 24.74398585 0.932798071 0.736744002 0.494024892 0.094795497 399.2109115 1552069.467 0.029467761 0.037090164 5.56E-07 6.255074935 -0.196054069 SQSSHS(ph)YDDSTLPLIDR ddPTM_A459_MK2206_30min_R1 2 SQSSHSYDDSTLPLIDR 17 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14;O60716-27;O60716-29;O60716-25;O60716-26;O60716-31;O60716-32;O60716-30;O60716-28;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 SQSS(0.001)HS(0.814)YDDS(0.172)T(0.013)LPLIDR;S(0.001)QS(0.085)S(0.238)HS(0.674)Y(0.002)DDS(0.001)TLPLIDR 166.3 1.50E-06 9007700 1362.96 1092.77 1097.19 942.45 2066.18 1687.3 1715.71 1377.35 999.09 1336.99 TRUE FALSE 1247.033095 1021.630474 1022.7158 1015.037662 1983.879675 1782.833468 1601.258116 1365.307974 1102.948981 1502.626415 0.829902285 0.679896523 0.680618808 0.675508997 1.320274724 1.186478189 1.065639537 0.908614384 0.734014103 1 10.55327065 -6.227936986 24.77135015 1.040289791 0.711306717 0.514840169 0.151804642 507.5026831 375242.4747 0.049133583 0.063426798 5.92E-07 6.227936986 -0.328983075 SQSSHS(ph)YDDSTLPLIDR ddPTM_A459_MK2206_30min_R2 2 SQSSHSYDDSTLPLIDR 17 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14;O60716-27;O60716-29;O60716-25;O60716-26;O60716-31;O60716-32;O60716-30;O60716-28;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 SQSSHS(1)YDDSTLPLIDR;S(0.001)QS(0.001)S(0.001)HS(0.994)Y(0.004)DDSTLPLIDR 145.73 0.00030533 25396000 46349 108496 83356 159715 121755 175550 132032 96652 143013 92893 TRUE FALSE 49897.51508 103108.2464 86135.04744 146665.7736 116974.2869 182230.6783 114696.0398 109284.7483 155452.0122 89861.90902 0.555268808 1.147407701 0.958526793 1.632123947 1.301711573 2.027896806 1.276358816 1.21614096 1.729898841 1 16.45542209 -4.750730478 0.959156523 1.46831491 0.108513008 0.43281434 0.30262461 1.98255582 1.386946363 0.099626319 2.855102407 1.78E-05 4.750730478 -1.359801902 SQSSHSYDDS(ph)TLPLIDR ddPTM_A459_MK2206_30min_R1 1 SQSSHSYDDSTLPLIDR 17 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14;O60716-27;O60716-29;O60716-25;O60716-26;O60716-31;O60716-32;O60716-30;O60716-28;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 SQSSHSYDDS(0.652)T(0.348)LPLIDR 166.91 9.29E-07 5773700 4869 1609.8 1827.5 1415.4 4015.8 3943.2 3582 3261 1713.3 1329.9 TRUE FALSE 4454.865982 1505.001727 1703.454392 1524.414353 3855.842182 4166.460576 3343.051316 3232.489421 1891.403666 1494.658052 2.980525195 1.006920429 1.139695055 1.019908434 2.57974871 2.787567745 2.236666314 2.16269495 1.265442396 1 10.54559975 -6.260632823 24.99956665 2.114164458 1.470554501 0.074367449 0.738702404 149.7368213 4641152.823 0.224182311 0.272718518 5.49E-07 6.260632823 -0.643609957 SQSSHSYDDS(ph)TLPLIDR ddPTM_A459_MK2206_30min_R2 1 SQSSHSYDDSTLPLIDR 17 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14;O60716-27;O60716-29;O60716-25;O60716-26;O60716-31;O60716-32;O60716-30;O60716-28;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 SQSSHSYDDS(0.5)T(0.5)LPLIDR 120.41 0.00097069 4662700 9584 17151 11561 16347 17961 23950 15573 12567 18239 13276 TRUE FALSE 10317.75841 16299.30628 11946.43797 15011.39781 17255.76089 24861.43403 13528.24639 14209.55005 19825.39525 12842.80521 0.80338822 1.269139103 0.930204716 1.168856614 1.343613067 1.935825829 1.05337161 1.106421052 1.54369664 1 13.64867274 -6.068732796 3.58866327 1.350397263 1.028601562 0.21709874 0.277542398 0.387770235 9.725278446 0.08501034 0.117192201 8.54E-07 6.068732796 -0.321795702 SQSSS(ph)QFR ddPTM_A459_MK2206_30min_R2 1 SQSSSQFR 8 0 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 SQS(0.225)S(0.174)S(0.601)QFR 94.409 0.022719 11800000 19624 22529 15662 16739 24207 20266 21343 17665 12834 18918 TRUE FALSE 21126.42853 21410.24262 16184.16326 15371.37015 23256.51155 21037.23683 18540.63846 19973.87615 13950.27812 18300.70721 1.154405034 1.169913401 0.88434633 0.839933123 1.270798515 1.149531359 1.013110491 1.091426464 0.762280821 1 14.15961178 -8.241166631 24.19198381 0.88114039 1.068267592 0.240483425 0.135340913 710.2772771 847595.5686 0.096070589 0.036196308 5.74E-09 8.241166631 0.187127202 SQSSTS(ph)PEGQALENR ddPTM_A459_MK2206_30min_R2 1 SQSSTSPEGQALENR 15 0 O60239-2;O60239 O60239-2 SH3BP5 SH3 domain-binding protein 5 1 SQSS(0.011)T(0.073)S(0.915)PEGQALENR 132.4 0.00081553 0 10614 15600 14753 19643 18113 14911 18327 13734 15938 14275 TRUE FALSE 11426.616 14825.32668 15244.85766 18038.10407 17401.79261 15478.44855 15920.64289 15529.08096 17324.25843 13809.20792 0.827463535 1.073582697 1.103963221 1.306237416 1.260158636 1.120878811 1.152900512 1.124545379 1.254543963 1 13.75334295 -4.684423016 1.6569417 1.177582262 0.641869516 0.592795497 0.084624519 0.864357863 1.936000363 0.023361536 0.803234274 2.07E-05 4.684423016 -0.535712746 SQSTT(ph)FNPDDMSEPEFK ddPTM_A459_MK2206_30min_R1 1 SQSTTFNPDDMSEPEFK 17 0 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 SQS(0.019)T(0.069)T(0.912)FNPDDMSEPEFK 341.3 2.36E-154 28765000 3744.4 4119.6 3973.7 3437.4 2740.6 3500.2 3490.5 3230.7 3884.2 3704.4 TRUE FALSE 3425.919117 3851.413291 3703.976315 3702.149144 2631.436099 3698.378299 3257.655114 3202.454331 4287.97649 4163.329039 0.82287974 0.925080208 0.889666966 0.889228093 0.632050956 0.888322365 0.782464005 0.769205196 1.029939371 1 12.02352187 -8.269470789 24.91789928 1.014969724 0.826783506 0.47079413 0.080601864 580.5760989 1801246.006 0.075017506 0.020767243 5.38E-09 8.269470789 -0.188186219 SQSTT(ph)FNPDDMSEPEFK ddPTM_A459_MK2206_30min_R2 3 SQSTTFNPDDMSEPEFK 17 0 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 SQS(0.011)T(0.134)T(0.854)FNPDDMSEPEFK;SQS(0.001)T(0.051)T(0.947)FNPDDMS(0.001)EPEFK;SQS(0.007)T(0.351)T(0.64)FNPDDMS(0.002)EPEFK 326.98 1.60E-119 62568700 180485 185610 168997 175960 152752 148857 186208 155635 187832 194838 TRUE FALSE 194303.0704 176392.8773 174631.2756 161583.5051 146754.189 154521.8574 161758.6659 175977.0289 204169.2878 188480.452 1.030892426 0.935868285 0.926521948 0.857295828 0.778617556 0.81982962 0.858225159 0.933661963 1.08323853 1 17.52405538 -8.077792992 4.329741372 1.038810593 0.882796081 0.444413535 0.068126638 0.227003556 7.704705459 0.054658919 0.019663291 8.36E-09 8.077792992 -0.156014512 SQSTTFNPDDMS(ph)EPEFK ddPTM_A459_MK2206_30min_R2 2 SQSTTFNPDDMSEPEFK 17 0 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.002)QS(0.024)T(0.219)T(0.074)FNPDDMS(0.681)EPEFK;SQS(0.002)T(0.01)T(0.01)FNPDDMS(0.978)EPEFK 99.796 0.017617 8279300 69200 75152 69996 66255 59257 52531 75979 62688 68520 76894 TRUE FALSE 74498.00521 71420.06096 72329.6317 60841.75456 56930.27244 54530.10402 66002.86603 70881.53684 74479.74574 74384.95508 1.001519798 0.960141213 0.972369098 0.817930918 0.7653466 0.733079747 0.887314726 0.952901521 1.001274326 1 16.18272323 -10.372441 14.20190706 0.99999999 0.893077617 0.093749937 0.092425412 0 0 0.101463836 0.024608595 4.24E-11 10.372441 -0.106922374 SQT(ph)LPIIR ddPTM_A459_MK2206_30min_R1 1 SQTLPIIR 8 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 S(0.065)QT(0.935)LPIIR 109.16 0.029397 4158400 2492.2 2332 2517.5 2145.4 2447.2 1875.6 2464.8 2182.1 2116.3 1661.4 TRUE FALSE 2280.225303 2180.186376 2346.619114 2310.63908 2349.722842 1981.794851 2300.377689 2163.02213 2336.296958 1867.226775 1.221182844 1.167606638 1.256740288 1.237471051 1.2584025 1.061357344 1.231975527 1.158414264 1.25121222 1 10.86668144 -6.71104694 24.9999962 1.156202843 1.227001566 0.250975144 0.073287033 181.834475 90208.34909 0.023108797 0.023108759 1.95E-07 6.71104694 0.070798723 SQT(ph)PPGVATPPIPK ddPTM_A459_MK2206_30min_R1 4 SQTPPGVATPPIPK 14 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.016)QT(0.984)PPGVATPPIPK;S(0.055)QT(0.945)PPGVATPPIPK;S(0.058)QT(0.932)PPGVAT(0.009)PPIPK;S(0.012)QT(0.987)PPGVATPPIPK 170.47 0.00037138 148147000 44324.2 46421.5 47011.4 42165.4 42295.1 37564 43304.7 43585.3 40569.4 37239.7 TRUE FALSE 40554.19403 43399.45191 43820.39715 45412.98641 40610.39661 39690.84122 40415.92248 43204.23832 44786.73431 41853.23518 0.96896199 1.03694378 1.047001432 1.085053192 0.970304839 0.948333887 0.965658265 1.032279539 1.07009014 1 15.35305152 -3.749088389 14.0885309 1.01276267 1.020528396 0 0.045721145 0 0 0.011364442 0 0.000178202 3.749088389 0.007765726 SQT(ph)PPGVATPPIPK ddPTM_A459_MK2206_30min_R2 5 SQTPPGVATPPIPK 14 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.009)QT(0.985)PPGVAT(0.005)PPIPK;S(0.006)QT(0.993)PPGVATPPIPK;S(0.013)QT(0.986)PPGVATPPIPK;S(0.032)QT(0.968)PPGVATPPIPK;S(0.01)QT(0.99)PPGVATPPIPK 178.47 0.00016733 253776500 455167 515987 492946 540798 507811 412596 540407 440630 422971 499474 TRUE FALSE 490014.9355 490363.8359 509380.5736 496613.0735 487871.7886 428297.6299 469450.9118 498221.8539 459760.253 483176.2043 1.0141537 1.014875798 1.054233568 1.02780946 1.009718161 0.886421198 0.971593608 1.031139053 0.951537449 1 18.88218988 -6.537771868 24.9997343 0.967830327 1.027490927 0.384003844 0.036058622 262.4303601 440515.2324 0.01233801 0.012342466 2.90E-07 6.537771868 0.059660599 SQTGDVS(ph)PK ddPTM_A459_MK2206_30min_R1 3 SQTGDVSPK 9 0 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBM4 H0YBF7 ASAP1 "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1" 1 SQTGDVS(1)PK;SQTGDVS(1)PK;SQT(0.001)GDVS(0.999)PK 104.24 0.01452 35838800 17200.3 19493.3 16870.3 17358.8 7782 7375.7 13024 15597.4 2801.7 11899.9 TRUE FALSE 15737.32416 18224.28263 15725.19104 18695.77778 7472.026461 7793.30576 12155.19272 15461.03358 3092.946741 13374.14945 1.176697196 1.362649841 1.175789989 1.397904057 0.558691713 0.582714122 0.908857252 1.156038642 0.231263061 1 13.70715952 -6.256921422 24.9961576 0.748015216 1.276968806 0.52554107 0.250660818 318.6897985 1763189.175 0.073972302 0.092274248 5.53E-07 6.256921422 0.528953591 SQTGDVS(ph)PK ddPTM_A459_MK2206_30min_R2 1 SQTGDVSPK 9 0 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBM4 H0YBF7 ASAP1 "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1" 1 SQTGDVS(1)PK 82.069 0.042275 31477000 68153 59758 67541 41912 59589 37145 63852 57927 47905 61514 TRUE FALSE 73370.84608 56790.50462 69792.78323 38487.65553 57249.23645 38558.579 55468.1557 65498.25779 52071.69031 59506.80322 1.232982485 0.954353142 1.17285385 0.646777401 0.962062039 0.647969256 0.932131331 1.100685203 0.875054405 1 15.860767 -4.616257454 1.088617527 0.893799163 1.453276813 0.268708578 0.158643314 3.225066123 2.495949092 0.04995823 2.268044053 2.42E-05 4.616257454 0.55947765 SQTPS(ph)PSTLNIDHMEQK ddPTM_A459_MK2206_30min_R2 1 SQTPSPSTLNIDHMEQK 17 0 A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 S(0.028)QT(0.008)PS(0.86)PS(0.089)T(0.015)LNIDHMEQK 112.57 0.0015009 0 11077 14854 14295 16891 15698 15051 15597 11470 11215 13127 TRUE FALSE 11925.06364 14116.37196 14771.58817 15510.95127 15081.61764 15623.77635 13549.09516 12969.16838 12190.46043 12698.66707 0.93907995 1.111642024 1.163239267 1.221462945 1.187653599 1.230347742 1.066969871 1.021301552 0.959979529 1 13.63238945 -7.618315976 2.951141261 0.989716536 1.147582664 0.416822665 0.078393516 0.268838701 4.69131463 0.045946557 0.023875655 2.41E-08 7.618315976 0.157866128 SQTT(ph)SLENGVFPR ddPTM_A459_MK2206_30min_R2 1 SQTTSLENGVFPR 13 0 J3KNG8;Q8TF40;A0A087WX11;Q8TF40-3;Q8TF40-2 J3KNG8 FNIP1 Folliculin-interacting protein 1 1 S(0.005)QT(0.012)T(0.609)S(0.374)LENGVFPR 106.52 0.016205 3561100 16159 21723 17786 19811 21110 22943 29261 26137 25289 28430 TRUE FALSE 17396.14546 20644.26741 18378.97636 18192.37793 20281.11533 23816.11194 25418.99555 29553.19564 27488.59151 27502.33143 0.632533482 0.750636995 0.668269758 0.661484935 0.737432584 0.865967018 0.924248754 1.074570558 0.999500409 1 14.7472663 -7.029618105 1.371658564 1.025970423 0.680137136 0.932750124 0.039839602 0.096908565 0.369322785 0.021083779 0.015042547 9.34E-08 7.029618105 -0.345833287 SQTTS(ph)LENGVFPR ddPTM_A459_MK2206_30min_R1 2 SQTTSLENGVFPR 13 0 J3KNG8;Q8TF40;A0A087WX11;Q8TF40-3;Q8TF40-2 J3KNG8 FNIP1 Folliculin-interacting protein 1 1 S(0.002)QT(0.016)T(0.321)S(0.66)LENGVFPR;S(0.142)QT(0.09)T(0.355)S(0.412)LENGVFPR 119.96 0.0031269 6069800 3224.1 2749.5 2702.7 2428.6 3414.2 3602.1 3776.3 3878.6 3336.7 3596.4 TRUE FALSE 2949.873365 2570.50705 2519.248254 2615.651193 3278.205184 3806.047789 3524.389917 3844.689809 3683.561905 4041.949183 0.72981456 0.63595729 0.623275588 0.647126194 0.811045621 0.941636724 0.87195305 0.951196968 0.911333057 1 11.98083547 -6.472192531 2.662179241 0.928601384 0.653896514 0.907612351 0.041401579 0.077878654 1.095350117 0.014118638 0.015581301 3.37E-07 6.472192531 -0.27470487 SQTTTERDS(ph)DTDVEEEELPVENR ddPTM_A459_MK2206_30min_R2 1 SQTTTERDSDTDVEEEELPVENR 23 1 Q14676-3;Q14676;Q14676-2;Q14676-4 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.058)QT(0.247)T(0.145)T(0.247)ERDS(0.302)DT(0.001)DVEEEELPVENR 139.16 1.91E-06 17216000 18436 18681 16089 18785 16458 21543 21671 21253 16890 15046 TRUE FALSE 19847.47433 17753.3287 16625.39923 17250.20541 15811.77623 22362.83396 18825.57167 24030.84007 18359.06167 14555.05025 1.363614278 1.219736682 1.142242654 1.18516976 1.08634295 1.536431244 1.293404787 1.651031062 1.261353369 1 13.8292322 -6.753881617 24.99849016 1.385693582 1.196581572 0.135561796 0.175936001 263.4488555 871397.8934 0.055425998 0.054391574 1.76E-07 6.753881617 -0.189112011 SQVEDPLPPVFS(ph)GTPK ddPTM_A459_MK2206_30min_R2 2 SQVEDPLPPVFSGTPK 16 0 Q13164-2;Q13164 Q13164-2 MAPK7 Mitogen-activated protein kinase 7 1 SQVEDPLPPVFS(0.79)GT(0.21)PK;SQVEDPLPPVFS(0.997)GT(0.003)PK 180.76 1.00E-06 5099700 47856 51207 51535 51567 61528 44520 63432 44110 40748 56416 TRUE FALSE 51519.89216 48664.13484 53253.15118 47353.81115 59112.10157 46214.2398 55103.3022 49875.32845 44292.18738 54575.15054 0.944017408 0.891690346 0.975776533 0.867680816 1.083132176 0.846800042 1.009677512 0.913883479 0.811581589 1 15.73595658 -10.58764713 4.450486531 1.000004529 0.930040018 0.074225328 0.076582132 101858903.1 4.212832267 5026.164338 0.01738462 2.58E-11 10.58764713 -0.069964511 SQVIAEKAPEPDLMS(ph)PTR ddPTM_A459_MK2206_30min_R1 2 SQVIAEKAPEPDLMSPTR 18 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 SQVIAEKAPEPDLMS(0.975)PT(0.025)R;SQVIAEKAPEPDLMS(0.847)PT(0.153)R 114.78 0.00059239 14415100 8339.1 7426 7767.8 6351.3 7060.6 5864.5 4663.9 5758.8 3308.1 2474.9 TRUE FALSE 7629.815755 6942.56605 7240.543378 6840.478226 6779.361351 6196.542922 4352.779741 5708.451419 3651.988833 2781.509297 2.743048806 2.495970824 2.603098752 2.459268511 2.437295953 2.227762794 1.564898505 2.05228558 1.31295223 1 11.44165221 -7.69621193 0.476927127 0.977194525 2.707260518 0.899643245 0.179192029 0.264365412 0.142808748 0.181363788 0.134655246 2.01E-08 7.69621193 1.730065993 up SQVIAEKAPEPDLMS(ph)PTR ddPTM_A459_MK2206_30min_R2 2 SQVIAEKAPEPDLMSPTR 18 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 SQVIAEKAPEPDLMS(0.889)PT(0.111)R;SQVIAEKAPEPDLMS(0.5)PT(0.5)R 87.319 0.0038079 8963000 20983.5 53437 28821 40022 42001 33593 32599 17881.8 32304 25280 TRUE FALSE 22590.01289 50783.39628 29781.87776 36752.07458 40351.8297 34871.40515 28318.71214 20219.01266 35113.74353 24455.11567 0.923733635 2.076596037 1.217817906 1.502837896 1.650036346 1.425934991 1.15798725 0.826780496 1.435844508 1 14.57784867 -7.261661169 3.705408611 1.082431842 1.497320426 0.244658415 0.310792377 0.299356424 9.19563521 0.124437452 0.086869124 5.47E-08 7.261661169 0.414888584 SQWESPS(ph)PTPSYR ddPTM_A459_MK2206_30min_R2 1 SQWESPSPTPSYR 13 0 Q92620 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 1 SQWES(0.203)PS(0.796)PT(0.001)PSYR 132.51 0.0016333 0 13381 15416 15339 15621 16143 14723 18421 12233 15614 13915 TRUE FALSE 14405.45965 14650.46386 15850.3946 14344.71433 15509.14471 15283.29408 16002.30057 13831.8951 16972.0775 13460.95469 1.070166268 1.08836737 1.177508949 1.065653563 1.152157857 1.135379654 1.188793881 1.027556769 1.260837577 1 13.71649311 -5.02103918 22.30973316 1.128636103 1.074716437 0.061302189 0.074050844 430.2017495 456195.508 0.01706824 0.046545801 9.53E-06 5.02103918 -0.053919665 SRDAT(ph)PPVSPINMEDQER ddPTM_A459_MK2206_30min_R2 1 SRDATPPVSPINMEDQER 18 1 P17275 P17275 JUNB Transcription factor jun-B 1 S(0.21)RDAT(0.79)PPVSPINMEDQER 84.025 0.011449 2715100 5750.8 7083.4 6669.9 7793.1 9520.2 9797.7 7388.5 7721.8 8950.1 10901 TRUE FALSE 6191.08567 6731.648656 6892.271137 7156.378801 9146.389113 10170.55834 6418.381075 8731.065773 9728.56352 10545.30126 0.587094244 0.638355272 0.653586936 0.678631992 0.867342609 0.964463517 0.608648432 0.827957927 0.922549606 1 13.36431269 -3.65485137 0.157662561 1.029622269 7.02E-14 0.583239923 0.096901035 27.0900333 0.513753774 0.382771521 5.814992108 0.000221385 3.65485137 -1.029622269 SRDPQLCR ddPTM_A459_MK2206_30min_R2 2 SRDPQLCR 8 1 Q8TAT6-2;Q8TAT6;I3L4S2 Q8TAT6-2 NPLOC4 Nuclear protein localization protein 4 homolog 0 ; 128.12 0.012425 4773400 11545.7 13788.4 12882 15688 13191.5 14483 14718.2 14837.3 15016.6 12491.3 FALSE TRUE 12429.64767 13103.68811 13311.47945 14406.24022 12673.53543 15034.16071 12785.68266 16776.58605 16322.71672 12083.7099 1.02862844 1.084409359 1.101605348 1.192203415 1.048811626 1.24416763 1.058092487 1.388363854 1.350803425 1 13.56077583 -7.749071791 24.99805924 1.277187754 1.113267389 0.217429857 0.115459789 259.8629102 525251.9458 0.052002767 0.029749095 1.78E-08 7.749071791 -0.163920365 SRDS(ph)GDENEPIQER ddPTM_A459_MK2206_30min_R1 2 SRDSGDENEPIQER 14 1 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;Q8WX93-4;Q8WX93-7 Q8WX93 PALLD Palladin 1 SRDS(1)GDENEPIQER;S(0.005)RDS(0.995)GDENEPIQER 193.31 0.00054609 26920400 7196.9 7791.7 7817.3 7261.1 9473.6 8234.4 8463.5 7297.3 6919.4 6649.1 TRUE FALSE 6584.765863 7284.458914 7286.683456 7820.35118 9096.246451 8700.624612 7898.915358 7233.500475 7638.696391 7472.840706 0.881159672 0.97479114 0.975088824 1.046503129 1.21724078 1.164299489 1.057016424 0.967971988 1.022194463 1 12.86744105 -5.633034217 2.362079754 1.077327935 0.930553573 0.389906637 0.072904491 0.338056003 3.799066139 0.024039269 0.050428939 2.33E-06 5.633034217 -0.146774362 SRDS(ph)GDENEPIQER ddPTM_A459_MK2206_30min_R2 1 SRDSGDENEPIQER 14 1 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;Q8WX93-4;Q8WX93-7 Q8WX93 PALLD Palladin 1 S(0.001)RDS(0.999)GDENEPIQER 142.4 0.002594 7231400 14846 18271 18607 19518 16220 19609 19657 14971 12567 17014 TRUE FALSE 15982.62117 17363.68871 19227.34809 17923.31697 15583.1213 20355.23424 17076.01229 16927.7611 13660.05494 16458.83457 0.971066396 1.054976805 1.168208357 1.088978499 0.946793725 1.236736061 1.037498263 1.028490871 0.829952746 1 14.00657456 -8.055275227 4.473661195 0.914678794 1.075238395 0.325588635 0.088800404 0.242473474 9.925205146 0.061438569 0.022667894 8.80E-09 8.055275227 0.160559601 SREPQAKPQLDLS(ph)IDSLDLSCEEGTPLSITSK ddPTM_A459_MK2206_30min_R1 1 SREPQAKPQLDLSIDSLDLSCEEGTPLSITSK 32 2 A0A087WY61;Q14980-2;Q14980;Q14980-5 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 S(0.007)REPQAKPQLDLS(0.726)IDS(0.202)LDLS(0.059)CEEGT(0.006)PLSITSK 56.252 0.00066619 10706000 3110.8 3338 3358.9 2981.2 3314.1 2383.4 3248.8 3298 3224 2845.4 TRUE FALSE 2846.210125 3120.695593 3130.907226 3210.812541 3182.092379 2518.346048 3032.07848 3269.165934 3559.146337 3197.909634 0.890022061 0.97585484 0.979048061 1.004034794 0.995053877 0.787497565 0.94814389 1.022282149 1.11296026 1 11.64291346 -7.856900132 3.917535902 1.058941571 0.941438199 0.360344664 0.065039931 0.256071771 7.29132929 0.040665679 0.018357394 1.39E-08 7.856900132 -0.117503372 SREQSSEAAETGVS(ph)ENEENPVR ddPTM_A459_MK2206_30min_R2 2 SREQSSEAAETGVSENEENPVR 22 1 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 SREQSSEAAET(0.021)GVS(0.979)ENEENPVR;SREQSSEAAET(0.018)GVS(0.982)ENEENPVR 109.25 2.87E-05 10490100 13329.2 25835.7 19522.8 30446 32095 47578 24964.6 20466.3 29872 20562.2 TRUE FALSE 14349.6938 24552.73671 20173.68041 27958.46441 30834.78904 49388.61413 21686.71803 23141.31568 32470.21256 19891.2571 0.721407085 1.234348165 1.014198364 1.405565484 1.55016794 2.482930761 1.090263824 1.163391311 1.632386149 1 14.27984683 -5.826212809 3.136610681 1.522716131 1.003001884 0.22799308 0.407243849 0.383437791 7.614839707 0.123048749 0.203445081 1.49E-06 5.826212809 -0.519714247 SRES(ph)LNVDVVK ddPTM_A459_MK2206_30min_R1 1 SRESLNVDVVK 11 1 Q07866-6;Q07866-4;Q07866-7;G3V5R9;Q07866-9;H0YG16;G3V3H3;Q07866-3;G3V2E7;Q07866-10;Q07866-5;Q07866;Q07866-2;Q07866-8;G5E9S8;F8W6L3;E7EVH7;H0YJT3;H0YJL0;H0YJU9;H0YGB8 Q07866-6 KLC1 Kinesin light chain 1 1 S(0.009)RES(0.991)LNVDVVK 93.424 0.012989 6923000 2384.5 2683.6 2133.1 2210.3 1999 1972.8 2042.3 1820.1 1880.2 1665.6 TRUE FALSE 2181.685753 2508.897152 1988.311115 2380.537689 1919.375597 2084.498231 1906.061893 1804.187058 2075.653518 1871.947103 1.165463357 1.34026071 1.06216202 1.271690683 1.02533645 1.113545478 1.018224228 0.963802372 1.108820605 1 10.87032395 -6.315090304 0.938605887 1.020383759 1.231828948 0.472816373 0.083896201 0.473018912 0.892362219 0.03888505 0.058362382 4.84E-07 6.315090304 0.211445189 SRES(ph)LNVDVVK ddPTM_A459_MK2206_30min_R2 1 SRESLNVDVVK 11 1 Q07866-6;Q07866-4;Q07866-7;G3V5R9;Q07866-9;H0YG16;G3V3H3;Q07866-3;G3V2E7;Q07866-10;Q07866-5;Q07866;Q07866-2;Q07866-8;G5E9S8;F8W6L3;E7EVH7;H0YJT3;H0YJL0;H0YJU9;H0YGB8 Q07866-6 KLC1 Kinesin light chain 1 1 S(0.102)RES(0.898)LNVDVVK 64.136 0.046311 2162400 19046 20876 23504 19468 20028 19240 22078 19202 17635 20584 TRUE FALSE 20504.1764 19839.3282 24287.61163 17877.40212 19241.60009 19972.19168 19179.13208 21711.76733 19168.86042 19912.34577 1.029721794 0.99633305 1.21972629 0.897804926 0.966315085 1.003005468 0.963177935 1.090367131 0.962662092 1 14.28137557 -5.789246544 24.99986527 0.986369362 1.073368079 0.287505445 0.070628612 297.574924 267531.7346 0.01989042 0.029508881 1.62E-06 5.789246544 0.086998717 SRESASPT(ph)IPNLDLLEAHTK ddPTM_A459_MK2206_30min_R2 1 SRESASPTIPNLDLLEAHTK 20 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 S(0.41)RES(0.089)AS(0.089)PT(0.411)IPNLDLLEAHTK 85.387 0.0013757 1879900 21765 39794 33525 37211 37305 31049 40086 35222 33899 33094 TRUE FALSE 23431.34513 37817.88783 34642.70677 34170.74227 35840.21826 32230.59145 34822.66005 39825.63634 36847.47374 32014.14549 0.731905999 1.181286811 1.082106245 1.067363871 1.119511944 1.006760948 1.0877273 1.244001229 1.15097477 1 14.96642188 -4.754475853 24.99995306 1.107083471 0.731905354 0.712198015 0.071021975 135.0616228 484846.0062 0.018181608 0.176723043 1.76E-05 4.754475853 -0.375178117 SRFS(ph)SLWGLDTT(ph)SKK ddPTM_A459_MK2206_30min_R1 1 SRFSSLWGLDTTSKK 15 2 Q13009-2;Q13009 Q13009-2 TIAM1 T-lymphoma invasion and metastasis-inducing protein 1 2 S(0.172)RFS(0.578)S(0.25)LWGLDT(0.001)T(0.5)S(0.5)KK 89.561 0.035059 0 450.69 471.35 406.66 408.06 348.5 388.87 483.6 394.55 287.41 441.15 TRUE FALSE 412.3564488 440.6650293 379.0570522 439.4888519 334.618507 410.8874833 451.3399264 391.1004909 317.287298 495.8029925 0.831694151 0.88879058 0.764531594 0.886418312 0.674902153 0.82873135 0.910321102 0.788822369 0.639946315 1 8.953623169 -5.25283817 24.71202424 0.806079102 0.86024236 0.032724906 0.101931698 1974.662957 5673338.419 0.025129606 0.064182202 5.59E-06 5.25283817 0.054163257 SRGS(ph)GHSQEQPAPQPSGGDPSPPQER ddPTM_A459_MK2206_30min_R2 1 SRGSGHSQEQPAPQPSGGDPSPPQER 26 1 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(0.048)RGS(0.59)GHS(0.362)QEQPAPQPSGGDPSPPQER 102.27 5.81E-07 3003500 816.04 2695 1209.8 3444.9 2872.3 4334.1 2737.3 2293.7 3137.7 2254.2 TRUE FALSE 878.5166498 2561.170219 1250.134128 3163.44065 2759.51907 4499.037213 2377.889222 2593.494465 3410.611474 2180.645639 0.402869973 1.174500879 0.573286235 1.450689922 1.265459651 2.063167501 1.090451919 1.189324125 1.564037464 1 11.09053963 -5.768896094 24.98607747 1.394908197 0.762647193 0.445261022 0.334794806 151.407532 507340.0949 0.091580775 0.138897415 1.70E-06 5.768896094 -0.632261005 SRGS(ph)TNLFSK ddPTM_A459_MK2206_30min_R2 2 SRGSTNLFSK 10 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YIY6;P27448-6;P27448-7;A2SY06 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 S(0.004)RGS(0.796)T(0.2)NLFSK;S(0.009)RGS(0.935)T(0.056)NLFSK 92.295 0.014753 13878700 110762 144798 123306 142972 122592 147973 148609 101089 117962 113295 TRUE FALSE 119242.0239 137607.5419 127416.9605 131290.7303 117778.4221 153604.2162 129096.4598 114301.6794 128222.1215 109598.1934 1.087992604 1.255563961 1.162582671 1.197927869 1.074638353 1.401521425 1.177906823 1.042915725 1.169929152 1 16.74186449 -8.466489998 0.985149833 1.0105283 1.193765857 0.241524695 0.095809703 0.78138207 1.672467225 0.090155208 0.030430873 3.42E-09 8.466489998 0.183237556 SRIPS(ph)PLQPEMQGTPDDEPSEPEPSPSTLIYR ddPTM_A459_MK2206_30min_R2 5 SRIPSPLQPEMQGTPDDEPSEPEPSPSTLIYR 32 1 Q96GY3;K7EMY4 Q96GY3 LIN37 Protein lin-37 homolog 1 S(0.256)RIPS(0.709)PLQPEMQGT(0.035)PDDEPSEPEPSPSTLIYR;S(0.091)RIPS(0.907)PLQPEMQGT(0.002)PDDEPSEPEPSPSTLIYR;S(0.084)RIPS(0.916)PLQPEMQGTPDDEPSEPEPSPSTLIYR;S(0.122)RIPS(0.832)PLQPEMQGT(0.043)PDDEPS(0.002)EPEPSPSTLIYR;S(0.041)RIPS(0.534)PLQPEMQGT(0.418)PDDEPS(0.006)EPEPSPSTLIYR 94.207 1.07E-08 42043300 77730.8 110126 98729 115262 115068 115576 116545 91794 102414 91901 TRUE FALSE 83681.92981 104657.303 102020.5756 105844.7259 110549.8521 119974.3257 101242.5015 103791.791 111321.7846 88902.2779 0.941279929 1.177217339 1.147558623 1.190573835 1.243498533 1.349507892 1.138806608 1.167481795 1.252181465 1 16.43993276 -4.143825179 1.478135658 1.20094242 2.55E-11 0.406177164 0.086741415 6.265345133 3.27215392 0.023689791 17.60634765 7.18E-05 4.143825179 -1.20094242 SRIPSPLQPEMQGT(ph)PDDEPSEPEPSPSTLIYR ddPTM_A459_MK2206_30min_R1 2 SRIPSPLQPEMQGTPDDEPSEPEPSPSTLIYR 32 1 Q96GY3;K7EMY4 Q96GY3 LIN37 Protein lin-37 homolog 1 SRIPSPLQPEMQGT(1)PDDEPSEPEPSPSTLIYR;S(0.059)RIPS(0.391)PLQPEMQGT(0.55)PDDEPSEPEPSPSTLIYR 140.71 4.94E-19 36571000 3909.3 4230.1 3874.2 3806.1 4854 4006.8 4179.2 4238.2 3157 2419.83 TRUE FALSE 3576.793506 3954.719721 3611.230098 4099.246481 4660.654901 4233.661553 3900.413193 4201.145864 3485.181447 2719.616809 1.315182894 1.454145933 1.32784519 1.507288258 1.713717493 1.556712526 1.434177484 1.544756544 1.281497245 1 11.40918768 -10.67463045 9.802193957 0.999999998 1.468959239 0.549757077 0.124480171 6.69E-09 3.83E-10 0.126121589 0.030588978 2.12E-11 10.67463045 0.468959241 SRKTATNDVVSENANY(ph)LR ddPTM_A459_MK2206_30min_R1 2 SRKTATNDVVSENANYLR 18 2 K7ENU7;H0Y9S9 K7ENU7 PPIP5K2 1 SRKTATNDVVS(0.157)ENANY(0.843)LR;SRKTATNDVVS(0.033)ENANY(0.967)LR 112.84 0.0011263 0 1238.54 1513.81 1168.42 1267.24 1575.96 1548.01 1309.49 1296.65 1287.78 1340.8 TRUE FALSE 1133.195669 1415.260694 1089.110906 1364.843044 1513.186176 1635.656988 1222.136311 1285.313526 1421.649339 1506.908427 0.752000353 0.939181618 0.722745249 0.905723945 1.004165979 1.085438876 0.811022282 0.852947335 0.943421189 1 10.55737603 -5.984407659 23.86035393 0.943194796 0.817452615 0.337825561 0.089924055 188.8485356 288983.1858 0.026330148 0.039036643 1.04E-06 5.984407659 -0.125742181 SRLDQELK ddPTM_A459_MK2206_30min_R1 1 SRLDQELK 8 1 P46781;B5MCT8;C9JM19;F2Z3C0;A8MXK4 P46781 RPS9 40S ribosomal protein S9 0 109.44 0.035083 30422000 5638.3 6090.5 5865.4 5155.7 5783.9 5649 5948.3 5578.1 4829.7 4853 FALSE TRUE 5158.732977 5694.007343 5467.27299 5552.792907 5553.515015 5968.841498 5551.49976 5529.33126 5331.764598 5454.226278 0.945823058 1.043962434 1.002392037 1.018071606 1.018204 1.094351645 1.017834515 1.013770052 0.977547378 1 12.41315884 -4.751502387 24.98825109 1.022594527 0.945822902 0.365612934 0.02948531 454.4134632 1142620.344 0.007526228 0.097927501 1.77E-05 4.751502387 -0.076771625 SRLGDLYEEEMR ddPTM_A459_MK2206_30min_R1 3 SRLGDLYEEEMR 12 1 P08670;B0YJC4 P08670 VIM Vimentin 0 ;; 170.95 0.00080528 33036200 9534.4 9024.6 9497.5 10630.6 12917.8 8569.3 7835.6 10355.6 4678.2 2834.08 FALSE TRUE 8723.449213 8437.0969 8852.836162 11449.37065 12403.25667 9054.486361 7312.901421 10265.06208 5164.515631 3185.187227 2.738755556 2.648854306 2.779377014 3.594567553 3.894043204 2.842685756 2.29590944 3.222749983 1.621416659 1 11.63716246 -8.405839797 3.328267324 1.011379894 3.005857877 0.70219079 0.447808514 0.137606858 2.751760123 0.47316828 0.126269948 3.93E-09 8.405839797 1.994477983 SRLGDLYEEEMR ddPTM_A459_MK2206_30min_R2 2 SRLGDLYEEEMR 12 1 P08670;B0YJC4 P08670 VIM Vimentin 0 ; 153.49 0.0013174 9474200 23496.7 60325 39145 61079 64987 61024 54950 38367 68284 38985 FALSE TRUE 25295.62542 57329.34822 40450.07476 56088.65032 62435.28385 63346.31108 47734.99899 43381.69863 74223.21889 37712.92264 0.670741583 1.520151296 1.072578626 1.487252814 1.655540846 1.679697744 1.265746478 1.150313887 1.968111026 1 15.20277134 -5.766039778 24.9481146 1.473803679 1.131056553 0.209440783 0.325433415 181.124518 982251.6097 0.087872738 0.135401619 1.71E-06 5.766039778 -0.342747126 SRLS(ph)AIEIDIPVVSHTT ddPTM_A459_MK2206_30min_R2 2 SRLSAIEIDIPVVSHTT 17 1 P56749 P56749 CLDN12 Claudin-12 1 S(0.005)RLS(0.995)AIEIDIPVVSHTT;S(0.025)RLS(0.975)AIEIDIPVVSHTT 158.15 2.07E-05 5164000 16191.2 16291.1 16840.7 19054.2 19584.4 25176 27046.2 12747.2 21859.9 20126.7 TRUE FALSE 17430.81072 15482.10766 17402.16053 17497.41091 18815.41805 26134.09032 23495.00145 14413.30281 23761.23459 19469.96743 0.895266558 0.79517892 0.893795051 0.89868722 0.966381589 1.342277044 1.206730393 0.740283869 1.220404435 1 14.24896285 -6.529402793 24.99733647 1.099153352 0.8751766 0.3405259 0.152218625 206.3150938 790503.458 0.051785139 0.051907588 2.96E-07 6.529402793 -0.223976752 SRLS(ph)SSSSNDSGNK ddPTM_A459_MK2206_30min_R1 2 SRLSSSSSNDSGNK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.043)RLS(0.844)S(0.05)S(0.05)S(0.01)S(0.003)NDSGNK;S(0.001)RLS(0.966)S(0.03)S(0.004)SSNDSGNK 133.25 0.0050748 3732400 1576.48 1137.64 1265.55 1359.79 1182.65 1391.7 1452.51 1580.88 572.714 1084.66 TRUE FALSE 1442.392098 1063.579429 1179.647992 1464.521261 1135.542546 1470.496851 1355.615708 1567.058533 632.2496698 1219.03587 1.183223672 0.87247591 0.96768932 1.201376676 0.931508723 1.206278575 1.112039229 1.285490093 0.518647306 1 10.25152486 -8.257062009 24.99990708 0.759323659 1.085720498 0.393303804 0.166449456 344.8669937 1969622.876 0.116584926 0.040599685 5.53E-09 8.257062009 0.326396839 SRLS(ph)SSSSNDSGNK ddPTM_A459_MK2206_30min_R2 1 SRLSSSSSNDSGNK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.049)RLS(0.902)S(0.009)S(0.009)S(0.026)S(0.005)NDSGNK 119.51 0.0012112 7259700 11334 9233.9 7971.1 8583.8 9083.2 7253.6 9878.8 9191.9 10525 10980 TRUE FALSE 12201.73975 8775.357953 8236.852496 7882.476082 8726.547929 7529.640831 8581.701693 10393.31289 11440.44548 10621.7235 1.148753284 0.826170814 0.775472314 0.742108951 0.821575513 0.708890683 0.80793872 0.9784959 1.077079956 1 13.37473026 -7.866565166 4.057567457 1.035301597 0.821780244 0.35760211 0.114797384 0.239621705 7.12739714 0.069953813 0.031622407 1.36E-08 7.866565166 -0.213521353 SRLT(ph)PVS(ph)PESSSTEEK ddPTM_A459_MK2206_30min_R1 1 SRLTPVSPESSSTEEK 16 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 2 S(0.207)RLT(0.793)PVS(0.704)PES(0.218)S(0.038)S(0.031)T(0.009)EEK 97.689 0.025229 51783000 5790.4 6557.3 7094.6 6232.1 5575.6 5262.7 6117.7 6228.7 5702.4 4755.1 TRUE FALSE 5297.896073 6130.418578 6613.038319 6712.097422 5353.512045 5560.669526 5709.599395 6174.243133 6295.184886 5344.197687 0.991336096 1.147116731 1.23742397 1.255959793 1.001742892 1.040505956 1.068373539 1.15531713 1.177947609 1 12.38375766 -6.267804433 24.99787777 1.079792904 1.162860748 0.184755438 0.085654263 1003.273516 3940208.688 0.028292441 0.032844028 5.40E-07 6.267804433 0.083067843 SRLT(ph)PVS(ph)PESSSTEEK ddPTM_A459_MK2206_30min_R2 4 SRLTPVSPESSSTEEK 16 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 2 S(0.121)RLT(0.879)PVS(0.451)PES(0.216)S(0.269)S(0.053)T(0.01)EEK;S(0.336)RLT(0.663)PVS(0.515)PES(0.286)S(0.053)S(0.066)T(0.08)EEK;S(0.122)RLT(0.878)PVS(0.998)PES(0.001)SSTEEK;S(0.125)RLT(0.875)PVS(0.742)PES(0.231)S(0.024)S(0.003)T(0.001)EEK 154.47 0.010826 265417000 341806 371937 356084 351650 364559 352339 429629 301510 340053 412915 TRUE FALSE 367974.9302 353467.1494 367955.6628 322919.0701 350244.5819 365747.5075 373218.1962 340918.3922 369630.1953 399441.6174 0.921223313 0.88490316 0.921175078 0.808426203 0.876835479 0.915646972 0.934349802 0.853487412 0.925367261 1 18.60762513 -6.767325997 21.76404792 0.917149518 0.880677446 0.177924889 0.044519198 60.31857234 223004.3291 0.015380894 0.013971749 1.71E-07 6.767325997 -0.036472072 SRLT(ph)PVSPES(ph)SSTEEK ddPTM_A459_MK2206_30min_R1 5 SRLTPVSPESSSTEEK 16 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 2 S(0.079)RLT(0.921)PVS(0.09)PES(0.804)S(0.068)S(0.032)T(0.007)EEK;S(0.021)RLT(0.979)PVS(0.467)PES(0.485)S(0.039)S(0.007)T(0.001)EEK;S(0.018)RLT(0.959)PVS(0.057)PES(0.374)S(0.154)S(0.115)T(0.324)EEK;S(0.011)RLT(0.989)PVS(0.126)PES(0.579)S(0.09)S(0.114)T(0.09)EEK;S(0.008)RLT(0.99)PVS(0.028)PES(0.803)S(0.16)S(0.009)T(0.002)EEK 183.88 8.13E-05 137201000 53393.1 54595.3 57557.3 50875.5 45258.8 42111.4 44815.1 48515.2 44332.3 42050.2 TRUE FALSE 48851.73647 51041.13605 53650.47084 54793.93983 43456.04616 44495.71108 41825.56645 48091.03672 48940.80123 47259.69624 1.03368706 1.080014052 1.135226739 1.159422175 0.919515985 0.941514961 0.885015558 1.017590898 1.035571642 1 15.52832274 -6.264899616 24.99465612 0.962087426 1.10287792 0.61399837 0.052580789 215.2975792 1555176.751 0.01742534 0.020542443 5.43E-07 6.264899616 0.140790495 SRLT(ph)PVSPESSSTEEK ddPTM_A459_MK2206_30min_R1 9 SRLTPVSPESSSTEEK 16 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 S(0.001)RLT(0.999)PVSPESSSTEEK;S(0.003)RLT(0.997)PVSPESSSTEEK;SRLT(0.999)PVS(0.001)PESSSTEEK;SRLT(0.999)PVSPESSSTEEK;SRLT(0.997)PVS(0.003)PESSSTEEK;S(0.001)RLT(0.999)PVSPESSSTEEK;S(0.303)RLT(0.696)PVS(0.001)PESSSTEEK;S(0.145)RLT(0.854)PVS(0.001)PESSSTEEK;S(0.17)RLT(0.83)PVSPESSSTEEK 266.39 1.15E-39 3245841900 46443.2 51101.6 52883 47557.4 41728 38108.5 44761.2 44475.7 38562.2 34809 TRUE FALSE 42492.96196 47774.87655 49293.4493 51220.27919 40065.8854 40266.17034 41775.26202 44086.85364 42570.87869 39121.40171 1.08618199 1.221195419 1.26001235 1.309264928 1.024142378 1.029261953 1.067836534 1.126924182 1.088173655 1 15.25567044 -6.272519223 24.99400408 1.061651935 1.222226561 0.621354078 0.062267005 515.7773321 1163492.334 0.020338281 0.023272336 5.34E-07 6.272519223 0.160574626 SRLT(ph)PVSPESSSTEEK ddPTM_A459_MK2206_30min_R2 7 SRLTPVSPESSSTEEK 16 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 S(0.02)RLT(0.98)PVSPESSSTEEK;SRLT(0.979)PVS(0.021)PESSSTEEK;S(0.096)RLT(0.902)PVS(0.001)PESSSTEEK;SRLT(1)PVSPESSSTEEK;S(0.066)RLT(0.931)PVS(0.003)PESSSTEEK;SRLT(0.946)PVS(0.043)PES(0.007)S(0.002)S(0.001)TEEK;S(0.001)RLT(0.989)PVS(0.009)PES(0.001)SSTEEK 233.37 1.41E-14 3677911200 907701 985711 939682 926489 1066523 938695 1135989 837914 866667 1015084 TRUE FALSE 977195.2865 936762.0251 971010.5289 850791.885 1024645.948 974417.696 986832.2797 947432.2368 942048.1291 981961.8922 0.995145834 0.953969836 0.988847466 0.866420471 1.043468139 0.992317221 1.004959854 0.964836054 0.959353043 1 19.90530751 -6.325046668 24.99999208 0.992845731 0.95399454 0.224217696 0.039044287 366.2073814 143931.7445 0.012063079 0.013678249 4.73E-07 6.325046668 -0.038851191 SRLTPVS(ph)PESSSTEEK ddPTM_A459_MK2206_30min_R1 1 SRLTPVSPESSSTEEK 16 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 SRLT(0.005)PVS(0.994)PES(0.001)SSTEEK 157.84 0.00034818 118850000 1312.5 3189.7 1600.1 2152.4 1492.9 1141.7 1279.4 1561.1 1088.4 1282.8 TRUE FALSE 1200.864983 2982.04995 1491.48967 2318.178221 1433.434632 1206.342067 1194.05356 1547.451467 1201.543075 1441.722949 0.832937413 2.068393205 1.034518922 1.607922121 0.994251103 0.836736398 0.828212911 1.073334838 0.833407747 1 10.49357824 -6.380378144 5.625870407 0.914336246 1.407838539 0.335821481 0.31630113 0.244940558 10.3529078 0.091961819 0.104355659 4.17E-07 6.380378144 0.493502293 SRLTPVS(ph)PESSSTEEK ddPTM_A459_MK2206_30min_R2 4 SRLTPVSPESSSTEEK 16 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 SRLTPVS(0.999)PES(0.001)SSTEEK;SRLT(0.097)PVS(0.903)PESSSTEEK;SRLTPVS(0.999)PES(0.001)SSTEEK;SRLTPVS(0.996)PES(0.004)SSTEEK 271.73 6.50E-50 238489700 91550.5 165635 125394 125669 154435 121629 152546 100266 131071 130333 TRUE FALSE 98559.67667 157409.8068 129574.5734 115401.4407 148371.1059 126257.6768 132516.527 113371.1105 142471.3187 126080.2449 0.781721806 1.248489063 1.027715115 0.915301527 1.176798999 1.001407294 1.051049092 0.899198051 1.130005092 1 16.94398272 -10.10386365 10.39883179 1.000000032 1.029853449 0.002570104 0.131320287 0 0 0.117959917 0.028609482 7.87E-11 10.10386365 0.029853417 SRLTPVSPES(ph)SSTEEK ddPTM_A459_MK2206_30min_R1 1 SRLTPVSPESSSTEEK 16 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 SRLTPVS(0.092)PES(0.836)S(0.071)ST(0.001)EEK 255.23 1.90E-29 49270000 4109 4184.2 4573.7 4217.2 4295.1 2995.8 2800.1 3833.6 1989.3 1320.6 TRUE FALSE 3759.507973 3911.807819 4263.249987 4542.009475 4124.017072 3165.419607 2613.310438 3800.083239 2196.094854 1484.205898 2.533009724 2.635623416 2.872411431 3.060228693 2.778601727 2.132736173 1.760746566 2.560347755 1.479642991 1 10.53547553 -8.138684388 0.498401899 0.981658614 2.827638498 0.757294841 0.313430413 0.463154901 0.292332924 0.361808929 0.208729393 7.27E-09 8.138684388 1.845979885 SRNEVVT(ph)PEK ddPTM_A459_MK2206_30min_R1 1 SRNEVVTPEK 10 1 Q99728-3;Q99728-2;Q99728;A0A494C142;A0A087X2H0 Q99728-3 BARD1 BRCA1-associated RING domain protein 1 1 SRNEVVT(1)PEK 142.12 0.012793 4535700 2882.2 3430.2 3053.6 2502.6 2472.2 2299 2403.9 2651.5 2673.1 2501.2 TRUE FALSE 2637.053755 3206.893357 2846.33014 2695.350686 2373.727039 2429.167393 2243.540217 2628.318215 2950.978311 2811.067539 0.938096904 1.140809786 1.012544203 0.958835264 0.844421917 0.864144087 0.798109681 0.934989351 1.049771402 1 11.4569024 -5.842279714 2.99238518 0.903670301 1.044896253 0.266867044 0.083294288 0.293671368 5.294525351 0.024990949 0.04121924 1.44E-06 5.842279714 0.141225952 SRNT(ph)DEMVELR ddPTM_A459_MK2206_30min_R2 1 SRNTDEMVELR 11 1 P61978;P61978-2;P61978-3;Q5T6W2;S4R457 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 S(0.004)RNT(0.996)DEMVELR 128.95 0.0037075 3782300 9108.4 15034 8828.5 8484.4 12237 8064.4 12165 10811 13180 12523 TRUE FALSE 9805.746107 14287.43342 9122.837784 7791.19738 11756.51389 8371.296393 10567.72089 12224.03482 14326.37258 12114.37554 0.809430588 1.179378448 0.753058856 0.643136525 0.970459753 0.691021701 0.872328983 1.009051996 1.182592741 1 13.56443242 -7.854770019 3.358504852 1.092248464 0.844772384 0.322503098 0.148103187 0.29559931 6.467780113 0.094345003 0.041239303 1.40E-08 7.854770019 -0.24747608 SRNTDEMVELR ddPTM_A459_MK2206_30min_R1 3 SRNTDEMVELR 11 1 P61978;P61978-2;P61978-3;Q5T6W2;S4R457 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ;; 145.23 0.0019882 10697700 7018.9 5586.6 6576.1 6771.7 9614.7 7229.4 7314.6 8223.3 4223.8 3557.05 FALSE TRUE 6421.905697 5222.911325 6129.732654 7293.257507 9231.72614 7638.72238 6826.65638 8151.404555 4662.879125 3997.724208 1.606390377 1.306471145 1.533305534 1.824352338 2.309245375 1.910767722 1.707635651 2.03901123 1.166383393 1 11.96496323 -5.65910755 4.748074266 1.784357139 1.449745622 0.046980688 0.375135639 0.431340317 16.19887488 0.100520334 0.177775171 2.19E-06 5.65910755 -0.334611517 SRPALS(ph)PLGDIDFCPPNPGPDGPR ddPTM_A459_MK2206_30min_R2 1 SRPALSPLGDIDFCPPNPGPDGPR 24 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 S(0.46)RPALS(0.54)PLGDIDFCPPNPGPDGPR 53.615 0.010452 3552500 6494 7251.4 6723.5 7301.8 6740.4 6707.6 6091.8 5227.1 7062.7 6351.1 TRUE FALSE 6991.185633 6891.306021 6947.658134 6705.219583 6475.738028 6962.862418 5291.939342 5910.299917 7677.00088 6143.864127 1.137913451 1.121656644 1.130828741 1.091368468 1.054017129 1.133303451 0.861337301 0.961984151 1.249539495 1 12.5849306 -6.422661419 1.292959104 1.024887482 1.128282455 0.144386707 0.096068588 0.846996552 2.912523739 0.041285563 0.050737165 3.78E-07 6.422661419 0.103394974 SRPCS(ph)LPVSELETVIASACGDPETPR ddPTM_A459_MK2206_30min_R1 1 SRPCSLPVSELETVIASACGDPETPR 26 1 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 S(0.063)RPCS(0.937)LPVSELETVIASACGDPETPR 130.24 3.33E-09 17320000 1793.2 1783.8 1744.5 1659.4 1927 1802.4 1934.7 2084.6 1729.9 1709 TRUE FALSE 1640.678924 1667.674296 1626.0882 1787.207276 1850.24351 1904.45033 1805.639693 2066.374562 1909.729296 1920.723822 0.854198248 0.868253039 0.846601777 0.930486338 0.963305337 0.991527417 0.940082938 1.075831173 0.994275842 1 10.90743438 -6.179920589 0.910364487 1.011327773 0.844943572 0.788771215 0.032204775 0.266616599 0.46540683 0.015410194 0.027560386 6.61E-07 6.179920589 -0.1663842 SRPCS(ph)LPVSELETVIASACGDPETPR ddPTM_A459_MK2206_30min_R2 2 SRPCSLPVSELETVIASACGDPETPR 26 1 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 S(0.144)RPCS(0.423)LPVS(0.423)ELET(0.01)VIASACGDPETPR;S(0.179)RPCS(0.821)LPVSELETVIASACGDPETPR 149.76 3.39E-11 19412400 18389.5 24451.8 28007.4 25873 34429.9 34389 27875.5 26560.1 32439 29404 TRUE FALSE 19797.41426 23237.55917 28941.15274 23759.09314 33078.00913 35697.69749 24215.41337 30031.59626 35260.48558 28444.54989 0.696000265 0.816942411 1.017458629 0.835277522 1.162894448 1.254992525 0.85131997 1.055794392 1.239621851 1 14.79586463 -4.847707195 0.749593556 1.084547849 0.480916958 0.488718941 0.129315709 2.33495694 1.063241253 0.054653513 1.171951664 1.42E-05 4.847707195 -0.603630891 SRPCSLPVS(ph)ELETVIASACGDPETPR ddPTM_A459_MK2206_30min_R2 1 SRPCSLPVSELETVIASACGDPETPR 26 1 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 S(0.139)RPCS(0.334)LPVS(0.467)ELET(0.059)VIASACGDPETPR 61.141 0.0026765 12379000 4495.1 5366.9 5267.4 5678.2 5413.2 6890.9 8060.1 4780.8 8410.4 6700.8 TRUE FALSE 4839.248312 5100.38755 5443.012487 5214.272896 5200.650569 7153.138028 7001.799188 5405.666975 9141.921389 6482.153445 0.746549484 0.786835362 0.839692015 0.804404422 0.80230291 1.103512604 1.080165604 0.833930733 1.410321657 1 12.66225746 -6.757301261 24.8582641 1.074868027 0.798349082 0.53518978 0.134763136 79.38741725 476891.5898 0.043065392 0.041585351 1.75E-07 6.757301261 -0.276518944 SRPTS(ph)EGS(ph)DIESTEPQK ddPTM_A459_MK2206_30min_R2 1 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 2 SRPT(0.006)S(0.993)EGS(0.513)DIES(0.396)T(0.091)EPQK 132.5 0.024119 13805000 36819 46545 44378 48666 47152 39336 58626 40748 39587 49114 TRUE FALSE 39637.89095 44233.64298 45857.54037 44689.83213 45300.57556 40832.95904 50928.33578 46073.90351 43030.2057 47511.4142 0.834281438 0.931010868 0.965189968 0.940612543 0.95346721 0.859434722 1.071917909 0.969743887 0.905681433 1 15.53598653 -4.758278175 2.778951816 0.956823394 0.807097181 0.332053093 0.05266915 0.576404142 5.773512314 0.01348028 0.205585374 1.74E-05 4.758278175 -0.149726213 SRPTS(ph)FADELAAR ddPTM_A459_MK2206_30min_R1 1 SRPTSFADELAAR 13 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;A0A0A0MT65;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2;A0A087WYF6 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 S(0.079)RPT(0.369)S(0.552)FADELAAR 140.96 0.004054 29628000 3104.9 3703.5 3499.9 2594.9 3769.1 2657.4 2776.8 2467.6 2382.5 1923.3 TRUE FALSE 2840.811951 3462.401477 3262.336539 2794.759648 3618.968766 2807.859692 2591.564739 2446.026033 2630.169401 2161.572924 1.314233685 1.601797209 1.509241952 1.292928689 1.674229319 1.298989111 1.198925426 1.131595426 1.216784949 1 11.07786579 -7.073633725 3.22731449 1.147630975 1.477836807 0.630136359 0.12238567 0.167473076 3.390182766 0.047450905 0.036772436 8.44E-08 7.073633725 0.330205832 SRPTSEGS(ph)DIESTEPQK ddPTM_A459_MK2206_30min_R1 4 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 1 S(0.001)RPT(0.003)S(0.003)EGS(0.992)DIES(0.001)TEPQK;SRPT(0.004)S(0.003)EGS(0.974)DIES(0.017)T(0.001)EPQK;SRPT(0.002)S(0.054)EGS(0.942)DIES(0.002)TEPQK;SRPTSEGS(0.834)DIES(0.153)T(0.013)EPQK 219.72 3.26E-11 127882000 24155.1 23469.5 22370.1 18986.7 21639.3 19142 21370.8 19768.5 20587.7 17885.5 TRUE FALSE 22100.5819 21941.63128 20851.67994 20449.05892 20777.36086 20225.8035 19945.19293 19595.66609 22727.86509 20101.29077 1.099460833 1.09155335 1.037330397 1.017300787 1.033633168 1.006194265 0.992234437 0.974846159 1.130666948 1 14.29500052 -5.310717847 2.560215503 1.019653238 1.100165883 0.344917301 0.039830629 0.312792093 3.93308603 0.010716767 0.03214828 4.89E-06 5.310717847 0.080512645 SRPTSEGS(ph)DIESTEPQK ddPTM_A459_MK2206_30min_R2 4 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 1 SRPT(0.008)S(0.005)EGS(0.987)DIESTEPQK;SRPT(0.002)S(0.002)EGS(0.996)DIESTEPQK;SRPTS(0.003)EGS(0.996)DIESTEPQK;SRPTSEGS(1)DIESTEPQK 296.79 9.88E-77 290759000 336155 368596 338941 357447 363338 291861 391702 303117 272058 361371 TRUE FALSE 361891.2853 350292.0586 350241.1238 328242.4367 349071.5245 302967.9749 340271.0569 342735.4327 295721.1131 349579.4939 1.03521886 1.002038348 1.001892645 0.938963648 0.998546913 0.866664035 0.973372474 0.980422018 0.84593381 1 18.41526103 -5.489650951 0.924703949 0.937706625 1.039645121 0.297404755 0.049476885 1.139153624 1.514949185 0.018572536 0.094287442 3.24E-06 5.489650951 0.101938496 SRPVS(ph)MDAR ddPTM_A459_MK2206_30min_R2 1 SRPVSMDAR 9 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 S(0.012)RPVS(0.988)MDAR 115.29 0.038996 17861000 24310 40257 39923 43334 48052 49165 41472 33954 41735 33633 TRUE FALSE 26171.19229 38257.89592 41254.01289 39793.47358 46165.23704 51036.00853 36026.67658 38391.90438 45365.03486 32535.55796 0.804387382 1.175879509 1.267966971 1.223076415 1.418916408 1.568622508 1.107301637 1.17999834 1.394321711 1 14.98972967 -4.573956321 1.729058142 1.287425795 0.405173082 0.445445762 0.15457008 1.579445078 3.058475354 0.042715436 2.731156662 2.67E-05 4.573956321 -0.882252713 SRQPS(ph)PLLLLPPPAGLTSDPGPSVR ddPTM_A459_MK2206_30min_R1 1 SRQPSPLLLLPPPAGLTSDPGPSVR 25 1 I3L2J0 I3L2J0 CIC 1 S(0.288)RQPS(0.712)PLLLLPPPAGLTSDPGPSVR 68.441 0.00086314 22899000 987.98 1192.9 1492.9 1057.7 1590.7 1451.6 1333.3 1386.4 1068.9 840.56 TRUE FALSE 903.9471129 1115.241993 1391.566107 1139.164237 1527.339051 1533.788338 1244.35799 1374.278851 1180.01598 944.6949187 0.956866704 1.180531377 1.473032277 1.205854096 1.616753748 1.623580594 1.317206185 1.454732976 1.249097414 1 9.883704688 -4.950209025 2.628090955 1.39451624 0.935476582 0.324148621 0.182365929 0.362983127 4.261492182 0.046503623 0.314753772 1.12E-05 4.950209025 -0.459039658 SRQPS(ph)PLLLLPPPAGLTSDPGPSVR ddPTM_A459_MK2206_30min_R2 1 SRQPSPLLLLPPPAGLTSDPGPSVR 25 1 I3L2J0 I3L2J0 CIC 1 S(0.219)RQPS(0.781)PLLLLPPPAGLTSDPGPSVR 81.532 0.0031556 0 3351.2 4077.8 4078.2 5469.3 4798.9 6249.4 4758.2 4937.7 4888.5 5242.6 TRUE FALSE 3607.770449 3875.302382 4214.165153 5022.440695 4610.471073 6487.225296 4133.442624 5583.074344 5313.692894 5071.534391 0.711376513 0.764128187 0.830944804 0.990319755 0.909088003 1.279144495 0.815028018 1.100864928 1.047748568 1 12.30820658 -5.627953281 1.292098107 1.035642054 0.710705916 0.523503952 0.113439979 0.393904497 1.248783471 0.036613042 0.112541873 2.36E-06 5.627953281 -0.324936138 SRS(ph)APPNLWAAQR ddPTM_A459_MK2206_30min_R2 1 SRSAPPNLWAAQR 13 1 Q92934;F5H3B1;F5H1R6 Q92934 BAD Bcl2-associated agonist of cell death 1 S(0.085)RS(0.915)APPNLWAAQR 85.28 0.015407 7227200 6557.2 8761.4 6138.7 6083.2 10199 8712.2 12532 14061 13419 16263 TRUE FALSE 7059.224274 8326.321616 6343.361194 5586.183101 9798.536014 9043.748876 10886.53335 15898.82098 14586.16036 15732.33964 0.448707849 0.529248783 0.403205203 0.355076437 0.622827643 0.574850854 0.691984383 1.010582109 0.927145021 1 13.94144562 -7.431015342 1.123512549 1.010893427 0.453055413 0.898353928 0.0740911 0.148935538 0.354738545 0.056580394 0.028007173 3.71E-08 7.431015342 -0.557838014 down SRS(ph)DIDVNAAAGAK ddPTM_A459_MK2206_30min_R1 4 SRSDIDVNAAAGAK 14 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 S(0.071)RS(0.929)DIDVNAAAGAK;S(0.176)RS(0.824)DIDVNAAAGAK;S(0.001)RS(0.999)DIDVNAAAGAK;S(0.214)RS(0.786)DIDVNAAAGAK 183.73 0.00036745 256696000 27782.2 28947.3 28563.2 25551.8 27881.8 22292.2 27467.4 26398.8 26413.5 23445.7 TRUE FALSE 25419.178 27062.82551 26624.40957 27519.80406 26771.20887 23554.3651 25635.09986 26167.99807 29159.27785 26350.33032 0.964662594 1.027039327 1.010401359 1.044381749 1.01597242 0.893892593 0.972856869 0.993080457 1.106600088 1 14.68553343 -8.140851625 10.57340118 1.053199246 0.990915315 0.229917185 0.046132799 0.633380537 51.57761605 0.032584266 0.012298594 7.23E-09 8.140851625 -0.062283931 SRS(ph)DIDVNAAAGAK ddPTM_A459_MK2206_30min_R2 4 SRSDIDVNAAAGAK 14 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 S(0.018)RS(0.982)DIDVNAAAGAK;S(0.114)RS(0.886)DIDVNAAAGAK;S(0.007)RS(0.993)DIDVNAAAGAK;S(0.025)RS(0.975)DIDVNAAAGAK 181.86 4.14E-05 379593000 717851 849550 831432 813287 820463 719906 967741 648566 706790 784081 TRUE FALSE 772810.2245 807362.5824 859151.5279 746838.8505 788247.5001 747302.5273 840675.4442 733335.8031 768265.3166 758496.5012 1.018871179 1.064424926 1.13270335 0.984630581 1.039223647 0.985241891 1.108344525 0.966828195 1.012879183 1 19.532783 -5.782540983 24.99953602 1.016295102 1.07124239 0.258217546 0.045007353 329.2816352 390106.2026 0.012479826 0.01852942 1.65E-06 5.782540983 0.054947288 SRS(ph)DIDVNAAASAK ddPTM_A459_MK2206_30min_R1 5 SRSDIDVNAAASAK 14 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.02)RS(0.979)DIDVNAAASAK;S(0.006)RS(0.992)DIDVNAAAS(0.001)AK;S(0.001)RS(0.999)DIDVNAAASAK;S(0.126)RS(0.874)DIDVNAAASAK;S(0.348)RS(0.652)DIDVNAAASAK 228.26 1.65E-12 250972200 17336 17746.3 17410.6 15014.67 17652.3 16070.89 17590.78 16622.96 15929.39 14286.94 TRUE FALSE 15861.48217 16591.01264 16228.81698 16171.10248 16949.17151 16980.8099 16417.33116 16477.62721 17585.30709 16056.91399 0.987828806 1.033262846 1.010705855 1.007111485 1.055568431 1.057538822 1.022446229 1.026201375 1.095185981 1 13.97090702 -6.253292654 24.63995319 1.043850447 1.011478261 0.28018288 0.025896027 731.2605419 2211707.357 0.007454601 0.009460134 5.58E-07 6.253292654 -0.032372187 SRS(ph)DIDVNAAASAK ddPTM_A459_MK2206_30min_R2 4 SRSDIDVNAAASAK 14 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.008)RS(0.992)DIDVNAAASAK;S(0.013)RS(0.987)DIDVNAAASAK;S(0.019)RS(0.981)DIDVNAAASAK;S(0.374)RS(0.626)DIDVNAAASAK 188.54 3.76E-05 278059100 1359043.8 1614488.4 1392428.8 1478042 1526575 1445012 1724746.2 1240449 1322875 1498029 TRUE FALSE 1463093.238 1534315.254 1438851.681 1357281.241 1466633.995 1500002.944 1498284.952 1402579.943 1437936.276 1449148.436 1.009622756 1.058770251 0.992894617 0.936606083 1.012066092 1.035092684 1.033907165 0.967864925 0.992262932 1 20.46677395 -5.284221005 24.02061371 0.996343583 1.034196506 0.206939043 0.029646199 703.3625714 741614.8407 0.008370041 0.017447172 5.20E-06 5.284221005 0.037852923 SRS(ph)DITQVDWR ddPTM_A459_MK2206_30min_R2 1 SRSDITQVDWR 11 1 C9J119;Q6ZWE6-3;Q6ZWE6-2;Q6ZWE6 C9J119 PLEKHM3 Pleckstrin homology domain-containing family M member 3 1 S(0.355)RS(0.644)DIT(0.001)QVDWR 91.845 0.014213 7192800 29232 36753 28045 32420 36384 37565 38465 33716 31502 29239 TRUE FALSE 31470.0244 34927.89946 28980.0063 29771.18229 34955.38135 38994.5624 33414.4993 38122.79696 34241.98702 28284.93382 1.112607319 1.234858801 1.024573947 1.052545588 1.235830409 1.37863368 1.181353278 1.347812839 1.210608702 1 14.78774618 -6.333235624 7.357459482 1.24914022 1.109720485 0.204096928 0.10998263 0.372956303 33.71129299 0.03297414 0.037450034 4.64E-07 6.333235624 -0.139419736 SRS(ph)DNALHLASER ddPTM_A459_MK2206_30min_R2 1 SRSDNALHLASER 13 1 A0A1X7SBR1;Q7Z3G6 A0A1X7SBR1 PRICKLE2 Prickle-like protein 2 1 S(0.154)RS(0.846)DNALHLASER 80.609 0.020197 8412900 8327.4 15467 11440 14415 13897 21382 11472 12070 14287 7436.5 TRUE FALSE 8964.952147 14698.93127 11821.40389 13237.24839 13351.33395 22195.70699 9965.71262 13647.59044 15529.65744 7193.847614 1.246197116 2.043264197 1.643265819 1.840079065 1.855937833 3.085373528 1.385310498 1.897119758 2.158741506 1 12.81254788 -6.033234264 2.790148435 1.97265061 1.684839898 0.029799989 0.539054033 0.941041539 14.66733019 0.162680923 0.237311806 9.26E-07 6.033234264 -0.287810712 SRS(ph)DVDMDAAAEATR ddPTM_A459_MK2206_30min_R1 2 SRSDVDMDAAAEATR 15 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 SRS(0.999)DVDMDAAAEATR;S(0.148)RS(0.852)DVDMDAAAEATR 151.03 0.0012075 27132000 5337.5 5167.8 5274.3 4594.1 5543.2 4784 5301.1 4674.1 4553.3 3983.9 TRUE FALSE 4883.517597 4831.375281 4916.295211 4947.938378 5322.402606 5054.865946 4947.473291 4633.234836 5026.631829 4477.455609 1.090690344 1.07904482 1.098010933 1.105078154 1.188711418 1.128959478 1.104974281 1.034791909 1.122653638 1 12.12846341 -9.168038177 0.666491786 0.998228503 1.112137097 0.420722563 0.037155714 2.371791898 1.578322376 0.054851092 0.015389203 6.79E-10 9.168038177 0.113908593 SRS(ph)DVDMDPSSATAVLGPAR ddPTM_A459_MK2206_30min_R1 3 SRSDVDMDPSSATAVLGPAR 20 1 M0QZR4;M0QYC1;M0QZH8;M0QYS3 M0QZR4 ARHGEF1 1 S(0.092)RS(0.908)DVDMDPSSATAVLGPAR;SRS(1)DVDMDPSSATAVLGPAR;S(0.013)RS(0.987)DVDMDPSSATAVLGPAR 240.46 1.94E-29 45836600 7222.4 6865.2 7091.6 6641.4 7846.5 6701.3 6941.3 7304.9 5814.8 4970.7 TRUE FALSE 6608.096954 6418.274232 6610.24195 7152.921779 7533.95729 7080.721815 6478.258542 7241.034029 6419.269268 5586.507843 1.182867211 1.148888431 1.183251172 1.280392327 1.348598713 1.267468339 1.159625785 1.296164658 1.149066546 1 12.44773101 -8.568985668 5.40288407 1.000027834 1.232686636 0.573585288 0.061855827 0.228182461 23.14469485 0.065437275 0.016991014 2.70E-09 8.568985668 0.232658802 SRS(ph)DVDMDPSSATAVLGPAR ddPTM_A459_MK2206_30min_R2 6 SRSDVDMDPSSATAVLGPAR 20 1 M0QZR4;M0QYC1;M0QZH8;M0QYS3 M0QZR4 ARHGEF1 1 S(0.116)RS(0.884)DVDMDPSSATAVLGPAR;S(0.023)RS(0.977)DVDMDPSSATAVLGPAR;S(0.029)RS(0.971)DVDMDPSSATAVLGPAR;S(0.032)RS(0.968)DVDMDPSSATAVLGPAR;S(0.097)RS(0.311)DVDMDPS(0.3)S(0.282)AT(0.009)AVLGPAR;S(0.076)RS(0.855)DVDMDPS(0.05)S(0.015)AT(0.005)AVLGPAR 171.83 6.42E-09 74682700 163474 216781 180979 220602 212983 197509 206715 150145 180062 191506 TRUE FALSE 175989.6951 206015.9708 187012.7495 202578.1109 204620.2173 205025.3434 179573.0722 169769.467 195723.4673 185257.1749 0.949975056 1.112053937 1.009476419 1.093496708 1.104519797 1.106706628 0.969317773 0.916398877 1.056496016 1 17.49916989 -7.274825422 24.62763969 0.978586398 1.06582875 0.297418722 0.057575684 740.4574638 1362287.398 0.023385017 0.015876109 5.31E-08 7.274825422 0.087242353 SRS(ph)ESDVSSVEQDSFIEPYATTSQLRPR ddPTM_A459_MK2206_30min_R2 2 SRSESDVSSVEQDSFIEPYATTSQLRPR 28 2 K7EQI2;A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8 K7EQI2 CEP89 Centrosomal protein of 89 kDa 1 S(0.219)RS(0.65)ES(0.064)DVS(0.033)S(0.033)VEQDS(0.001)FIEPYATTSQLRPR;S(0.194)RS(0.533)ES(0.194)DVS(0.02)S(0.059)VEQDSFIEPYATTSQLRPR 62.646 0.0025139 11654400 3546.83 6857.8 3307.3 7001.7 3701.7 4469.7 5660.4 4616.7 4579.2 4435.5 TRUE FALSE 3818.378032 6517.251624 3417.563731 6429.638713 3556.352658 4639.797566 4917.182681 5220.118542 4977.490539 4290.769998 0.889905083 1.51890025 0.796491943 1.498481325 0.828837868 1.081343807 1.145990739 1.216592487 1.160045992 1 12.06702085 -12.0179488 1.774703581 7.18E-05 1.132247299 0.024541552 0.236180765 4521008.036 313934.4471 18118769.68 0.055843367 9.60E-13 12.0179488 1.132175476 SRS(ph)ESETSTMAAK ddPTM_A459_MK2206_30min_R1 3 SRSESETSTMAAK 13 1 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.01)RS(0.864)ES(0.125)ET(0.001)STMAAK;S(0.002)RS(0.988)ES(0.006)ET(0.003)STMAAK;S(0.029)RS(0.97)ES(0.001)ETSTMAAK 162.79 0.00070192 78191000 12772.3 13082 14042.4 10581.2 13459.6 12701.7 16180.1 15726.4 14693.5 13836.5 TRUE FALSE 11685.94881 12230.35942 13089.24101 11396.16586 12923.47563 13420.85928 15100.75505 15588.90574 16220.94191 15550.67008 0.75147558 0.7864844 0.841715562 0.732840823 0.831055869 0.863040577 0.971067804 1.002458779 1.04310244 1 13.92468913 -7.163296171 1.389794808 1.022716197 0.783046096 0.921394526 0.030105983 0.107537819 0.410909125 0.017152031 0.010924801 6.87E-08 7.163296171 -0.239670101 SRS(ph)ESETSTMAAK ddPTM_A459_MK2206_30min_R2 2 SRSESETSTMAAK 13 1 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.202)RS(0.796)ES(0.002)ETSTMAAK;S(0.267)RS(0.51)ES(0.222)ET(0.001)STMAAK 156.29 0.00020088 52403000 97199 113481 106599 113781 106810 93324 129395 106517 115762 126365 TRUE FALSE 104640.6302 107845.6986 110152.9575 104484.7283 102616.1027 96875.51022 112405.2811 120439.1376 125830.7695 122241.7204 0.85601405 0.882233154 0.901107716 0.854738693 0.839452377 0.792491384 0.919532879 0.985253948 1.029360263 1 16.89937723 -7.658950098 2.892563364 1.009975015 0.856936209 0.845912026 0.028724192 0.105389633 1.762694375 0.017734504 0.008886064 2.19E-08 7.658950098 -0.153038806 SRS(ph)FDYNYR ddPTM_A459_MK2206_30min_R1 2 SRSFDYNYR 9 1 O75494-2;O75494;Q5JRI1;O75494-5;O75494-4;O75494-6;O75494-3 O75494-2;O75494-6 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.008)RS(0.992)FDYNYR;S(0.016)RS(0.984)FDYNYR 142.19 0.010164 64959000 9253 8334 7363.1 6186.2 7378.6 7544.9 7454.4 5916.4 5924.2 5675.6 TRUE FALSE 8465.983761 7791.455085 6863.313287 6662.662196 7084.694738 7972.085718 6957.130577 5864.673539 6540.04179 6378.736177 1.327219613 1.221473168 1.075967574 1.044511328 1.110673736 1.249790789 1.090675392 0.919409955 1.025288021 1 12.63905489 -1.522878745 0.416611604 1.036406394 6.152486573 0.544233047 0.080008137 70.70709099 0.911694927 0.06241896 300.721348 0.03 1.522878745 5.11608018 SRS(ph)FDYNYR ddPTM_A459_MK2206_30min_R2 2 SRSFDYNYR 9 1 O75494-2;O75494;Q5JRI1;O75494-5;O75494-4;O75494-6;O75494-3 O75494-2;O75494-6 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.147)RS(0.853)FDYNYR;S(0.072)RS(0.928)FDYNYR 89.189 0.016608 27116200 44266 55269 49375 52477 54500 63878 50829 44309 50010 49004 TRUE FALSE 47655.03899 52524.42183 51021.13786 48189.46123 52360.05616 66308.92205 44155.09124 50100.33844 54359.7794 47405.00349 1.005274454 1.107993207 1.076281702 1.016547995 1.104525942 1.398774753 0.931443687 1.056857605 1.146709744 1 15.53275172 -1.555842235 21.81804362 1.089601449 0.005440079 0 0.1208926 0 0 0.027543174 0 0.027807232 1.555842235 -1.08416137 SRS(ph)FSGLIK ddPTM_A459_MK2206_30min_R2 1 SRSFSGLIK 9 1 Q14CB8-4;Q14CB8-6;Q14CB8-7;Q14CB8-3;Q14CB8;Q14CB8-2 Q14CB8-4 ARHGAP19 Rho GTPase-activating protein 19 1 S(0.346)RS(0.638)FS(0.017)GLIK 70.54 0.040178 2657300 10644 15193 11176 10936 11031 17675 16292 12821 18253 16025 TRUE FALSE 11458.91282 14438.53771 11548.60226 10042.49382 10597.86751 18347.63451 14152.84083 14496.74872 19840.61295 15502.10556 0.739184285 0.931392039 0.744969915 0.647814826 0.68364052 1.183557578 0.912962486 0.935147078 1.279865684 1 13.92017656 -6.753706849 24.99999702 1.04891926 0.753621169 0.613998616 0.123799566 131.0291356 423629.0132 0.042376891 0.041616817 1.76E-07 6.753706849 -0.295298091 SRS(ph)FTLDDESLK ddPTM_A459_MK2206_30min_R1 4 SRSFTLDDESLK 12 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(0.002)RS(0.994)FT(0.004)LDDESLK;S(0.002)RS(0.985)FT(0.013)LDDESLK;S(0.172)RS(0.824)FT(0.004)LDDESLK;S(0.432)RS(0.565)FT(0.003)LDDESLK 171.15 0.00015255 190543200 31065.4 38371 35536.3 31965.6 29903.3 26738.7 26839.8 27878.5 24138.9 21070 TRUE FALSE 28423.1246 35873.04093 33124.19497 34427.59605 28712.18824 28252.62209 25049.36591 27634.76121 26648.22504 23680.31067 1.200285123 1.514888948 1.398807449 1.453849003 1.212492042 1.193084942 1.057814074 1.166993187 1.125332577 1 14.53140039 -6.543829354 2.063486754 1.108961482 1.401524889 0.68237136 0.090829276 0.181640873 1.561553424 0.032162814 0.034265128 2.86E-07 6.543829354 0.292563407 SRS(ph)FTLDDESLK ddPTM_A459_MK2206_30min_R2 3 SRSFTLDDESLK 12 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(0.014)RS(0.948)FT(0.038)LDDESLK;S(0.014)RS(0.982)FT(0.004)LDDESLK;S(0.062)RS(0.933)FT(0.005)LDDESLK 103.77 0.0057156 163304000 519290 601990 623050 539730 576500 470120 586040 428020 469630 544720 TRUE FALSE 559047.2417 572096.052 643822.176 495632.3325 553863.7133 488010.746 509092.244 483963.6836 510477.5685 526945.831 1.060919754 1.085682851 1.221799544 0.940575489 1.051082826 0.926111789 0.966118743 0.918431564 0.968747713 1 19.00729514 -5.780806745 24.99902128 0.96562286 1.119088954 0.644642371 0.052877068 142.2751331 183645.5572 0.014876007 0.022102193 1.66E-06 5.780806745 0.153466094 SRS(ph)GDVLAK ddPTM_A459_MK2206_30min_R2 2 SRSGDVLAK 9 1 P85299;P85299-5;P85299-2;P85299-4;P85299-3;B1AHG4 P85299 PRR5 Proline-rich protein 5 1 S(0.009)RS(0.991)GDVLAK;S(0.033)RS(0.967)GDVLAK 103.11 0.0085422 13612300 97644 87031 111386 102046 100743 79886 104741 72914 70666 107664 TRUE FALSE 105119.6997 82709.16709 115099.5536 93708.51537 96787.32363 82926.11771 90988.38088 82444.11015 76812.40095 104150.9325 1.00930157 0.794127956 1.105122642 0.899737651 0.929298676 0.796210996 0.873620415 0.791583025 0.737510449 1 16.66831623 -6.667784657 5.26449574 0.829104752 0.947230024 0.228467897 0.098326959 0.296482371 13.18948393 0.03155778 0.031322188 2.15E-07 6.667784657 0.118125272 SRS(ph)GEGEVSGLMR ddPTM_A459_MK2206_30min_R1 1 SRSGEGEVSGLMR 13 1 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 S(0.001)RS(0.999)GEGEVSGLMR 136.83 0.0050958 63100000 3103.3 3310.3 3063.7 2684.9 3442.9 2760.3 2645.1 2650.7 2549.3 1703.4 TRUE FALSE 2839.348039 3094.798868 2855.74458 2891.691463 3305.762003 2916.585801 2468.650205 2627.525209 2814.308858 1914.430052 1.483129684 1.616564087 1.491694396 1.510471203 1.7267604 1.523474727 1.289496162 1.37248431 1.470050501 1 10.90269923 -9.445273587 0.3482275 0.896188191 1.580161566 0.71155353 0.100602971 2.578513531 0.463503429 0.505380523 0.098865674 3.59E-10 9.445273587 0.683973375 SRS(ph)PAPPADK ddPTM_A459_MK2206_30min_R1 1 SRSPAPPADK 10 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 S(0.145)RS(0.855)PAPPADK 120.55 0.023988 11689000 2057.6 2409.1 2064.2 1564.3 1516.1 1497.5 2225.9 1730.1 815.35 2651.5 TRUE FALSE 1882.590315 2252.267152 1924.087855 1684.782657 1455.710527 1582.287156 2077.414272 1714.973918 900.1085503 2979.987838 0.631744295 0.755797431 0.645669701 0.565365615 0.488495459 0.530971011 0.697121728 0.575496952 0.302051082 1 11.54109073 -13.4123895 14.03310005 0.844576782 0.606584725 0 0.173915586 0 0 0 0.037993188 3.87E-14 13.4123895 -0.237992057 SRS(ph)PASAEAPGDSGER ddPTM_A459_MK2206_30min_R1 2 SRSPASAEAPGDSGER 16 1 H7BY64;Q8NB15;Q8NB15-1 H7BY64 PRAP1;ZNF511 Zinc finger protein 511 1 S(0.014)RS(0.986)PASAEAPGDSGER;S(0.231)RS(0.764)PAS(0.004)AEAPGDSGER 161.48 0.00022056 5485400 1757.96 1482.19 1517.38 1449.69 1711.75 1777.43 2354.04 1402.03 1507.74 1667.87 TRUE FALSE 1608.436271 1385.699162 1414.384473 1561.345375 1643.567373 1878.066551 2197.006287 1389.7722 1664.474969 1874.498327 0.85806226 0.739237342 0.75454027 0.832940394 0.876803862 1.001903562 1.172050279 0.741410211 0.887957564 1 10.87228882 -6.347690301 2.397309236 0.955859335 0.783843213 0.346611878 0.105906946 0.368766836 4.15295052 0.038128002 0.045756044 4.49E-07 6.347690301 -0.172016123 SRS(ph)PAVNGENK ddPTM_A459_MK2206_30min_R2 1 SRSPAVNGENK 11 1 Q8IZD2-6;Q8IZD2-5;Q8IZD2-2;Q8IZD2-7;Q8IZD2;Q8IZD2-8 Q8IZD2-6 KMT2E Histone-lysine N-methyltransferase 2E 1 S(0.026)RS(0.974)PAVNGENK 98.898 0.0097843 1857800 7124.8 6681.8 5541.5 8218.4 7751.5 4690.7 7462 7075.4 6721.8 8109.1 TRUE FALSE 7670.280166 6349.991528 5726.250844 7546.930431 7447.137162 4869.207875 6482.230437 8000.179073 7306.450014 7844.500731 0.977790739 0.809483197 0.729970082 0.962066381 0.949344951 0.620716097 0.826340727 1.019845539 0.931410457 1 12.93746591 -7.754256967 24.91678691 0.981721004 0.83456603 0.28083021 0.105655825 207.3852034 719455.2874 0.052726391 0.029620377 1.76E-08 7.754256967 -0.147154974 SRS(ph)PESQVIGENTK ddPTM_A459_MK2206_30min_R1 1 SRSPESQVIGENTK 14 1 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 S(0.396)RS(0.603)PES(0.001)QVIGENTK 118.71 0.011009 3631900 1491.8 1145.5 1434.2 1169.7 1091.1 1309.3 1315.1 977.43 1229.8 1346.3 TRUE FALSE 1364.914576 1070.927742 1336.8505 1259.790497 1047.639177 1383.431435 1227.372079 968.8844326 1357.642111 1513.089808 0.902071093 0.707775398 0.883523564 0.832594662 0.692384002 0.914308871 0.811169352 0.640335046 0.897264725 1 10.5632819 -8.523453095 24.99657959 1.000000008 0.797870048 0.350022212 0.087861642 55.88300635 2432152.053 0.081244747 0.020977303 3.00E-09 8.523453095 -0.20212996 SRS(ph)PESQVIGENTK ddPTM_A459_MK2206_30min_R2 1 SRSPESQVIGENTK 14 1 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 S(0.037)RS(0.867)PES(0.096)QVIGENTK 104.44 0.046188 0 12183 12275 9737.2 13782 10962 10686 14104 11941 8412.7 11028 TRUE FALSE 13115.73985 11665.44135 10061.83339 12655.96651 10531.5768 11092.66322 12252.12786 13501.7297 9144.421439 10668.15726 1.229428806 1.09348232 0.943165079 1.186331079 0.987197371 1.039791873 1.148476495 1.265610299 0.857169726 1 13.38102338 -8.576655431 0.011728454 6.23E-08 2.111113031 0.084099075 0.120189763 4122.915408 30.21643506 2763.408232 2670.275923 2.65E-09 8.576655431 2.111112969 SRS(ph)PHEAGFCVYLK ddPTM_A459_MK2206_30min_R1 1 SRSPHEAGFCVYLK 14 1 Q9NTZ6 Q9NTZ6 RBM12 RNA-binding protein 12 1 S(0.017)RS(0.983)PHEAGFCVYLK 101.15 0.0046705 20380000 4916.1 3938.2 4260.4 4434.9 4553.3 4519.6 4542.5 4129.8 3513.8 2999.7 TRUE FALSE 4497.95988 3681.822464 3971.215918 4776.476766 4371.932419 4775.495846 4239.478113 4093.693594 3879.072084 3371.325483 1.334181438 1.092099378 1.177939045 1.416794905 1.296799268 1.416503945 1.257510773 1.21426828 1.150607411 1 11.7191002 -8.480206295 1.407360343 1.003294558 1.282591703 0.474416232 0.093576074 0.410326805 1.781802806 0.096148647 0.028925113 3.31E-09 8.480206295 0.279297145 SRS(ph)PLELEPEAK ddPTM_A459_MK2206_30min_R1 6 SRSPLELEPEAK 12 1 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(0.191)RS(0.809)PLELEPEAK;S(0.004)RS(0.996)PLELEPEAK;S(0.035)RS(0.965)PLELEPEAK;S(0.009)RS(0.991)PLELEPEAK;S(0.078)RS(0.922)PLELEPEAK;S(0.043)RS(0.957)PLELEPEAK 189.33 0.00061288 631786100 44759.9 48738.7 49676.8 41224 41060.7 38151.5 42038.5 39591.7 40534.8 37886.9 TRUE FALSE 40952.83546 45565.80177 46304.87722 44399.07962 39425.16537 40311.60496 39234.18837 39245.55394 44748.53752 42580.6152 0.961771812 1.070106704 1.087463791 1.042706391 0.925894687 0.946712601 0.921409618 0.921676536 1.050913363 1 15.37790917 -6.247943835 23.38822889 0.954480961 1.04597978 0.382423117 0.048809105 316.0068373 547648.797 0.014438089 0.018512917 5.65E-07 6.247943835 0.091498819 SRS(ph)PLELEPEAK ddPTM_A459_MK2206_30min_R2 6 SRSPLELEPEAK 12 1 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(0.001)RS(0.999)PLELEPEAK;SRS(1)PLELEPEAK;S(0.322)RS(0.678)PLELEPEAK;S(0.426)RS(0.574)PLELEPEAK;S(0.127)RS(0.873)PLELEPEAK;S(0.051)RS(0.949)PLELEPEAK 156.72 0.00024084 619730000 1614890 2138230 1771454 2645680 2142378 2229481 2205248 1890336 1913501 1837129 TRUE FALSE 1738527.22 2032048.607 1830513.392 2429519.481 2058257.475 2314325.462 1915696.289 2137409.406 2079933.858 1777183.631 0.978248499 1.143409478 1.030008019 1.36706159 1.158156894 1.302243292 1.077939418 1.20269474 1.170353936 1 20.76116133 -4.582033885 1.23057802 1.182951883 0.823869515 0.204845766 0.107263896 3.214891931 3.065099996 0.030563595 1.652474538 2.62E-05 4.582033885 -0.359082368 SRS(ph)PLGFYVHLK ddPTM_A459_MK2206_30min_R1 3 SRSPLGFYVHLK 12 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.133)RS(0.866)PLGFYVHLK;S(0.033)RS(0.967)PLGFYVHLK;S(0.24)RS(0.76)PLGFYVHLK 115.04 0.0029447 18588700 7733.12 7101.6 7797.1 6983.4 7974.5 6694.87 7749.7 6564.1 6689.3 6615 TRUE FALSE 7075.377536 6639.284549 7267.854576 7521.262678 7656.858779 7073.927754 7232.731653 6506.710766 7384.676673 7434.516141 0.951693076 0.893035192 0.977582729 1.011668081 1.029906807 0.951498069 0.972858424 0.875202991 0.993296206 1 12.86002314 -5.281541507 23.7576385 0.974184802 0.922364135 0.20898118 0.041937304 639.4217886 755698.6257 0.011646962 0.024306421 5.23E-06 5.281541507 -0.051820667 SRS(ph)PLGFYVHLK ddPTM_A459_MK2206_30min_R2 1 SRSPLGFYVHLK 12 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.014)RS(0.986)PLGFYVHLK 103.31 0.0046287 6541100 22837 26571 23868 30101 29284 24747 27957 22366 23697 24327 TRUE FALSE 24585.41828 25251.52278 24663.74721 27641.65201 28134.16302 25688.76443 24286.21232 25289.31299 25758.12223 23533.21198 1.044711546 1.073016416 1.048039988 1.174580505 1.195508843 1.091596185 1.031997346 1.074622241 1.094543416 1 14.52241062 -9.883807559 8.795297861 0.999996805 1.093388558 0.22658175 0.050977696 0 0 0.054889074 0.013312556 1.31E-10 9.883807559 0.093391753 SRS(ph)PLHPMSEIPR ddPTM_A459_MK2206_30min_R1 1 SRSPLHPMSEIPR 13 1 Q9NVW2-2;Q9NVW2 Q9NVW2-2 RLIM E3 ubiquitin-protein ligase RLIM 1 S(0.042)RS(0.957)PLHPMSEIPR 102.97 0.0048772 14810000 2384.8 2410.6 2520.2 1734.5 2648.8 2401.8 2518.2 2406 2009.9 1822.3 TRUE FALSE 2181.960237 2253.669502 2349.135846 1868.091491 2543.292687 2537.78784 2350.215473 2384.964596 2218.836297 2048.060282 1.065378913 1.100392172 1.147005226 0.9121272 1.241805581 1.239117746 1.147532372 1.164499218 1.083384272 1 11.00004246 -6.296182379 24.99993585 1.159008327 1.065864672 0.191701008 0.087091226 975.010785 701583.6483 0.026703476 0.030280811 5.06E-07 6.296182379 -0.093143655 SRS(ph)PLHPMSEIPR ddPTM_A459_MK2206_30min_R2 4 SRSPLHPMSEIPR 13 1 Q9NVW2-2;Q9NVW2 Q9NVW2-2 RLIM E3 ubiquitin-protein ligase RLIM 1 S(0.139)RS(0.86)PLHPMS(0.001)EIPR;S(0.41)RS(0.588)PLHPMS(0.002)EIPR;S(0.354)RS(0.646)PLHPMSEIPR;S(0.355)RS(0.645)PLHPMSEIPR 77.051 0.024138 57207600 73991 90250 85467 97262 85291 91521 103192 86095 80613 86644 TRUE FALSE 79655.80785 85768.31624 88316.42712 89315.38347 81942.04679 95003.89579 89642.76644 97347.91211 87624.57303 83816.81338 0.950355957 1.023282952 1.053683904 1.065602233 0.977632571 1.133470624 1.069508167 1.161436568 1.045429544 1 16.35495205 -6.761369924 25 1.091279964 1.019680109 0.2845636 0.052404419 2.32181494 835761.5451 0.017300269 0.016265633 1.73E-07 6.761369924 -0.071599855 SRS(ph)PLLVTVVESDPRPQGQPR ddPTM_A459_MK2206_30min_R2 4 SRSPLLVTVVESDPRPQGQPR 21 2 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 S(0.244)RS(0.756)PLLVTVVESDPRPQGQPR;S(0.251)RS(0.749)PLLVTVVESDPRPQGQPR;S(0.258)RS(0.742)PLLVTVVESDPRPQGQPR;S(0.257)RS(0.743)PLLVTVVESDPRPQGQPR 118.05 2.95E-05 61400000 34793.6 44696.2 43997.6 48432 49743 50081.5 53065.1 38044.6 45765.5 42060 TRUE FALSE 37457.42477 42476.6517 45464.45802 44474.95067 47789.83988 51987.38658 46097.58863 43017.15985 49746.10046 40687.58564 0.920610652 1.043970809 1.117403682 1.093084044 1.174555804 1.277721097 1.132964463 1.057255159 1.22263584 1 15.31230105 -4.595084136 1.080747222 1.147921177 0.732967225 0.445112764 0.074715969 2.198484422 1.625969722 0.023546326 1.151126414 2.54E-05 4.595084136 -0.414953953 SRS(ph)PSSPELNNK ddPTM_A459_MK2206_30min_R1 1 SRSPSSPELNNK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.365)RS(0.634)PS(0.001)SPELNNK 154.1 0.0046191 0 774.26 1040.3 1058.3 993.34 826.6 817.08 1069.6 1097.6 846.23 751.36 TRUE FALSE 708.4051212 972.5762809 986.4655446 1069.847219 793.6747716 863.3423635 998.2489356 1088.003799 934.1986368 844.4441493 0.838901095 1.151735472 1.16818329 1.266924781 0.939878348 1.022379472 1.182137311 1.288426002 1.106288246 1 9.721858197 -7.27916752 23.38150901 1.168248409 1.076851328 0.064022311 0.132366282 936.8388647 1235580.114 0.05642461 0.038165137 5.26E-08 7.27916752 -0.091397081 SRS(ph)PSSPELNNK ddPTM_A459_MK2206_30min_R2 1 SRSPSSPELNNK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.014)RS(0.98)PS(0.005)S(0.001)PELNNK 118.24 0.021694 2540600 9501.1 20527 13505 16663 18198 12568 16471 11719 10396 11046 TRUE FALSE 10228.51152 19507.65903 13955.24996 15301.5796 17483.45508 13046.28405 14308.33791 13250.71354 11300.22529 10685.56992 0.957226577 1.825607728 1.305990233 1.431985351 1.636174318 1.220925429 1.33903367 1.24005679 1.057522001 1 13.38337624 -7.968314847 0.971405414 0.993039655 1.433098369 0.304934584 0.218101395 0.609988234 1.072402973 0.188525972 0.071312135 1.08E-08 7.968314847 0.440058714 SRS(ph)PSTESQLMSK ddPTM_A459_MK2206_30min_R1 2 SRSPSTESQLMSK 13 1 P35612;A0A1C7CYY0;P35612-5;P35612-6;P35612-4;P35612-3 P35612 ADD2 Beta-adducin 1 S(0.036)RS(0.918)PS(0.036)T(0.01)ESQLMSK;S(0.049)RS(0.816)PS(0.135)TESQLMSK 171.15 0.00099301 23776800 4956.5 4846.4 4490.4 3886.8 4564.8 4354.2 5006.8 4219.3 4034.1 3779.4 TRUE FALSE 4534.923647 4530.898479 4185.604159 4186.162009 4382.97435 4600.731041 4672.805507 4182.411105 4453.459131 4247.620605 1.067638584 1.066690955 0.985399721 0.985531053 1.03186578 1.08313135 1.100099548 0.984647993 1.048459725 1 12.0524392 -5.068485301 24.99968604 1.029825701 1.067403154 0.142092818 0.038726775 333.9186587 121891.4447 0.010676968 0.028248648 8.54E-06 5.068485301 0.037577453 SRS(ph)PSTESQLMSK ddPTM_A459_MK2206_30min_R2 1 SRSPSTESQLMSK 13 1 P35612;A0A1C7CYY0;P35612-5;P35612-6;P35612-4;P35612-3 P35612 ADD2 Beta-adducin 1 S(0.064)RS(0.515)PS(0.309)T(0.11)ES(0.002)QLMSK 77.027 0.024165 30713000 37425 46007 35306 51671 45402 37537 45592 37481 31825 38931 TRUE FALSE 40290.28677 43722.35928 36483.08442 47449.31401 43619.28935 38965.49684 39605.71563 42379.89539 34593.08097 37660.68466 1.069823535 1.160954977 0.968731311 1.259916394 1.158218172 1.034646534 1.051646193 1.125308681 0.918546258 1 15.20077161 -8.256732108 24.97693615 0.959273123 1.104061702 0.352438262 0.078282607 401.4446882 2130105.442 0.056683426 0.019859171 5.54E-09 8.256732108 0.144788579 SRS(ph)PVDLR ddPTM_A459_MK2206_30min_R2 1 SRSPVDLR 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.21)RS(0.79)PVDLR 75.416 0.032048 34277000 23009 21411 19445 25403 23563 24782 26802 18477 22159 23380 TRUE FALSE 24770.58673 20347.76087 20093.28659 23327.49364 22637.79823 25725.09638 23282.86521 20892.00734 24086.34977 22617.11251 1.095214374 0.899662185 0.888410781 1.031409011 1.000914604 1.137417359 1.029435795 0.923725667 1.06496131 1 14.46512713 -5.806785276 24.99012027 1.027295273 0.954952265 0.144880248 0.072727556 222.4739934 122604.3791 0.020872874 0.030959628 1.56E-06 5.806785276 -0.072343008 SRS(ph)QPCDLDAR ddPTM_A459_MK2206_30min_R1 2 SRSQPCDLDAR 11 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.365)RS(0.635)QPCDLDAR;S(0.487)RS(0.513)QPCDLDAR 190.57 9.42E-05 22719000 3476 3700.1 3774.3 3196.9 4273.6 3834.1 3815.2 3875.7 2948.7 2686.7 TRUE FALSE 3180.347947 3459.222817 3518.111032 3443.125792 4103.373463 4051.183429 3560.694969 3841.815164 3255.227917 3019.54868 1.053252749 1.145609223 1.165111547 1.140278286 1.358936019 1.341651968 1.179214296 1.272314366 1.078051147 1 11.56011722 -4.99625399 1.188901304 1.217864456 1.024919473 0.117378109 0.106324262 1.964098309 3.063913368 0.033261291 0.428603847 1.01E-05 4.99625399 -0.192944983 SRS(ph)QPCDLDAR ddPTM_A459_MK2206_30min_R2 1 SRSQPCDLDAR 11 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.408)RS(0.592)QPCDLDAR 118.52 0.025094 3772800 7336.7 15537 12453 12203 13110 14124 11064 9986.9 12479 10086 TRUE FALSE 7898.403393 14765.45517 12868.1768 11205.97586 12595.23553 14661.49872 9611.28351 11292.22212 13564.40086 9756.894646 0.809520209 1.513335514 1.318880368 1.148518691 1.290906173 1.502680848 0.985076078 1.15735821 1.390237504 1 13.25220633 -10.92038389 6.52825237 0.999971652 1.243126372 0.100382977 0.20998948 8.31E-05 7.67E-06 0.195013151 0.04729213 1.20E-11 10.92038389 0.24315472 SRS(ph)SDIVSSVR ddPTM_A459_MK2206_30min_R1 1 SRSSDIVSSVR 11 1 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.363)RS(0.593)S(0.044)DIVSSVR 120.9 0.021827 20884000 3291.3 3048.2 3378.9 2727.9 3810.2 2748.9 3354.2 3270.7 2725.5 2858 TRUE FALSE 3011.357652 2849.761626 3149.549682 2938.003331 3658.431666 2904.540342 3130.447438 3242.104615 3008.825478 3212.070617 0.937512904 0.887203915 0.980535629 0.914675822 1.138963648 0.904257935 0.97458861 1.009350354 0.936724573 1 11.6492879 -5.579444062 1.930101027 0.987636553 0.914929193 0.152737865 0.063441353 0.628209297 4.636985457 0.01837754 0.045427655 2.63E-06 5.579444062 -0.07270736 SRS(ph)SDIVSSVR ddPTM_A459_MK2206_30min_R2 2 SRSSDIVSSVR 11 1 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.001)RS(0.85)S(0.149)DIVSSVR;S(0.026)RS(0.487)S(0.487)DIVSSVR 95.195 0.011804 79778000 87448 105081 103036 141011 99176 119644 109099 64264 104360 101802 TRUE FALSE 94143.08612 99862.83034 106471.1688 129489.9502 95281.85192 124197.1363 94774.17025 72663.52545 113437.0442 98480.20908 0.955959446 1.014039585 1.081142798 1.314882974 0.967522844 1.261138024 0.962367679 0.737849017 1.151876557 1 16.5875462 -7.492567502 24.13053912 0.936939338 1.099381318 0.169251061 0.144218637 665.3158231 529654.2614 0.059024775 0.039722324 3.22E-08 7.492567502 0.16244198 SRS(ph)TTELDDYSTNK ddPTM_A459_MK2206_30min_R1 2 SRSTTELDDYSTNK 14 1 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.022)RS(0.865)T(0.085)T(0.009)ELDDYS(0.019)TNK;S(0.058)RS(0.685)T(0.257)TELDDYSTNK 241.66 5.64E-19 42764000 10557.3 8680.6 8842.8 6894 8523.4 8273.1 10408 10530.2 9836.8 8975.9 TRUE FALSE 9659.346196 8115.491362 8242.575373 7424.977075 8183.894929 8741.515773 9713.70131 10438.13557 10859.37056 10087.90226 0.957517822 0.804477597 0.817075261 0.736027857 0.811258349 0.866534543 0.96290597 1.034718151 1.076474601 1 13.30033858 -7.35882222 1.917130265 1.043146804 0.819340832 0.747883436 0.054541459 0.171936651 1.232062822 0.030871982 0.017973751 4.38E-08 7.35882222 -0.223805972 SRS(ph)TTELDDYSTNK ddPTM_A459_MK2206_30min_R2 2 SRSTTELDDYSTNK 14 1 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.127)RS(0.869)T(0.003)TELDDYSTNK;S(0.329)RS(0.336)T(0.336)TELDDYSTNK 257.46 5.89E-35 36528000 139081 143512 129162 145855 132792 122720 163678 130637 129604 160712 TRUE FALSE 149729.1483 136385.4028 133468.1966 133938.1799 127577.9189 127390.1956 142186.882 147711.7044 140876.7216 155467.9806 0.963086725 0.877257183 0.858493151 0.861516175 0.82060575 0.819398278 0.914573415 0.950110138 0.906146212 1 17.24625796 -7.488784684 5.688390412 0.944020324 0.864415072 0.44208438 0.043024667 0.192775848 17.9236333 0.019723435 0.012613065 3.25E-08 7.488784684 -0.079605252 SRSANPAGAGSRS(ph)SS(ph)PGKLLGSGYGGLT(ph)GGSS(ph)R ddPTM_A459_MK2206_30min_R2 1 SRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSR 33 3 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460 H0Y5T1;Q7Z460 CLASP1 CLIP-associating protein 1 4 S(0.004)RS(0.009)ANPAGAGS(0.008)RS(0.543)S(0.501)S(0.772)PGKLLGS(0.204)GY(0.362)GGLT(0.377)GGS(0.377)S(0.844)R 40.986 0.028133 3591200 4640.6 4636.5 3839.4 4319.1 3876.2 4731.5 4469.3 3558.6 3087.2 4083.6 TRUE FALSE 4995.887904 4406.258152 3967.40368 3966.215714 3724.000912 4911.560548 3882.475541 4023.721239 3355.719076 3950.352466 1.264668899 1.115408863 1.004316378 1.004015654 0.942700922 1.243322106 0.982817502 1.018572715 0.849473333 1 11.94776567 -4.864214014 2.138812305 1.011335269 1.308426142 0.429852596 0.09281761 0.55069261 3.348811068 0.025151439 0.2993159 1.37E-05 4.864214014 0.297090872 SRSDVDMDPS(ph)SATAVLGPAR ddPTM_A459_MK2206_30min_R2 1 SRSDVDMDPSSATAVLGPAR 20 1 M0QZR4;M0QYC1;M0QZH8;M0QYS3 M0QZR4 ARHGEF1 1 SRSDVDMDPS(0.478)S(0.478)AT(0.044)AVLGPAR 107.09 0.018171 8385800 18452 26374 23141 26448 21668 23142 25792 19485 24976 17387 TRUE FALSE 19864.69931 25064.30551 23912.50939 24287.1138 20817.20545 24022.68503 22405.47942 22031.7564 27148.36733 16819.66361 1.181040225 1.490178763 1.421699621 1.443971435 1.237670736 1.428250028 1.332100328 1.309880917 1.614085035 1 14.03786123 -10.89217097 6.457081991 0.999967547 1.383540679 0.48352263 0.119157724 5.26E-05 5.14E-06 0.10903571 0.026442813 1.28E-11 10.89217097 0.383573132 SRSES(ph)DLSQPESDEEGYALSGR ddPTM_A459_MK2206_30min_R1 1 SRSESDLSQPESDEEGYALSGR 22 1 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 S(0.29)RS(0.29)ES(0.414)DLS(0.005)QPESDEEGYALSGR 84.214 0.0003759 7499700 638.11 757.59 634.39 644.67 711.6 631.72 792.88 429.67 566.28 540.41 TRUE FALSE 583.8353937 708.2707533 591.3293743 694.3225951 683.2554652 667.4874405 739.9884219 425.9134405 625.1468325 607.3600707 0.96126733 1.166146389 0.973605943 1.143181168 1.124959473 1.098997897 1.218368572 0.701253607 1.029285366 1 9.246408255 -7.747104771 24.9999996 0.898952022 1.098710416 0.376099334 0.110614851 210.0371219 366312.6009 0.04882196 0.028019956 1.79E-08 7.747104771 0.199758394 SRSEYLNR ddPTM_A459_MK2206_30min_R1 2 SRSEYLNR 8 1 P46087-2;P46087;P46087-4;P46087-3;F5GYR3 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 0 ; 115.49 0.027659 1626080 1092.18 1276.73 1090.28 1331.78 1167.69 951.68 1056.88 1151.21 557.18 673.19 FALSE TRUE 999.2843557 1193.614645 1016.274831 1434.353926 1121.178435 1005.563299 986.3774636 1141.145092 615.1008549 756.5898595 1.320774186 1.577624429 1.343230838 1.895814368 1.481884036 1.329073191 1.303714887 1.508274368 0.812991143 1 9.56336763 -8.25781012 24.97428787 0.906495534 1.473750435 0.630327319 0.172613068 184.6564017 1270712.514 0.130369104 0.044904722 5.52E-09 8.25781012 0.567254901 SRSEYLNR ddPTM_A459_MK2206_30min_R2 2 SRSEYLNR 8 1 P46087-2;P46087;P46087-4;P46087-3;F5GYR3 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 0 ; 132.76 0.0091113 3195000 9645.4 15355.5 11556 16729 16864.4 18642.6 15602.2 13916.6 13628.5 13806.8 FALSE TRUE 10383.85924 14592.9682 11941.27127 15362.18719 16202.21892 19352.05721 13553.6124 15735.5474 14813.8823 13356.28525 0.777451144 1.092591834 0.894056323 1.15018412 1.213078234 1.448910146 1.014774104 1.178138016 1.10913192 1 13.70523119 -5.811128349 6.351854157 1.176268703 0.938595057 0.379814149 0.137651563 0.199469274 18.15658401 0.038499135 0.058404317 1.54E-06 5.811128349 -0.237673646 SRSLS(ph)NS(ph)NPDISGTPTSPDDEVR ddPTM_A459_MK2206_30min_R2 2 SRSLSNSNPDISGTPTSPDDEVR 23 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 2 S(0.062)RS(0.411)LS(0.54)NS(0.962)NPDIS(0.013)GT(0.005)PT(0.004)S(0.003)PDDEVR;S(0.019)RS(0.398)LS(0.591)NS(0.992)NPDISGTPTSPDDEVR 97.188 0.00013265 4048900 11006.4 16490.9 17064.8 20414.7 17296.4 17705.8 19710.1 14986.6 19749.5 14895.8 TRUE FALSE 11849.05845 15671.98589 17633.73191 18746.75371 16617.25643 18379.60663 17122.14019 16945.40008 21467.27581 14409.75127 0.822294447 1.087595865 1.223736037 1.300976912 1.15319523 1.275497841 1.188232876 1.175967563 1.48977421 1 13.81475781 -4.795995934 1.999766982 1.233346247 0.708292917 0.522990607 0.117744252 0.535529103 2.409478375 0.029715251 0.518558005 1.60E-05 4.795995934 -0.52505333 SRSPGS(ph)PVGEGTGSPPK ddPTM_A459_MK2206_30min_R2 1 SRSPGSPVGEGTGSPPK 17 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 S(0.2)RS(0.05)PGS(0.616)PVGEGT(0.004)GS(0.13)PPK 140.84 0.0023871 13663000 15859 24090 21080 24219 27622 20434 24816 18354 17614 18380 TRUE FALSE 17073.17723 22893.72563 21782.79668 22240.23023 26537.42149 21211.63019 21557.62939 20752.93082 19146.03388 17780.26211 0.960232033 1.287592134 1.225111112 1.250838154 1.492521389 1.192987486 1.212447222 1.167189252 1.076813928 1 14.11798897 -8.226154194 1.346474908 1.00304171 1.246212143 0.292182191 0.121510945 0.520589753 1.807848234 0.115149851 0.036412846 5.94E-09 8.226154194 0.243170433 SRSPGSPVGEGTGS(ph)PPK ddPTM_A459_MK2206_30min_R1 2 SRSPGSPVGEGTGSPPK 17 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 S(0.325)RS(0.09)PGS(0.216)PVGEGT(0.019)GS(0.35)PPK;S(0.237)RS(0.016)PGS(0.348)PVGEGT(0.019)GS(0.38)PPK 162.82 6.65E-05 21888000 5407.2 5260.6 4919.2 4760.6 5307.7 4544.9 5116.1 4980.5 4272.5 3549.3 TRUE FALSE 4947.289246 4918.133984 4585.29841 5127.262237 5096.28307 4802.22831 4774.814304 4936.956014 4716.641664 3989.01408 1.240228574 1.232919685 1.149481631 1.285345736 1.277579614 1.203863465 1.196991088 1.237638152 1.182407876 1 11.9618165 -9.264417726 0.904309943 0.997851605 1.229885036 0.769438305 0.037287346 1.618762735 1.58652121 0.04497158 0.012392303 5.44E-10 9.264417726 0.232033431 SRSPS(ph)TESQLMSK ddPTM_A459_MK2206_30min_R2 1 SRSPSTESQLMSK 13 1 P35612;A0A1C7CYY0;P35612-5;P35612-6;P35612-4;P35612-3 P35612 ADD2 Beta-adducin 1 SRS(0.004)PS(0.765)T(0.231)ES(0.001)QLMSK 101.08 0.0057248 36746000 41783 54641 42723 48008 42265 48941 43399 34058 37440 44795 TRUE FALSE 44981.93861 51927.6074 44147.3635 44085.59283 40605.46374 50803.48405 37700.65917 38509.49754 40696.46352 43333.34282 1.03804451 1.198329139 1.018785088 1.017359612 0.937048958 1.172387837 0.870015021 0.888680518 0.939148953 1 15.40318991 -6.151883933 0.579576762 0.931136044 1.126347565 0.285494391 0.087628977 1.372606152 0.910337331 0.063670409 0.148114536 7.05E-07 6.151883933 0.195211521 SRSS(ph)SVGSSSSYPISPAVSR ddPTM_A459_MK2206_30min_R1 1 SRSSSVGSSSSYPISPAVSR 20 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 S(0.002)RS(0.044)S(0.508)S(0.396)VGS(0.017)S(0.023)S(0.007)S(0.003)YPISPAVSR 72.158 0.0049056 4380200 1644.4 1377.6 1441.8 1571.2 1568.5 1302.4 1503.6 1470.6 1170.3 1218.1 TRUE FALSE 1504.535145 1287.91799 1343.934633 1692.214096 1506.023324 1376.140762 1403.297587 1457.742699 1291.956873 1369.007424 1.098997068 0.940767717 0.981685424 1.236088327 1.100084117 1.005210591 1.025047463 1.064817234 0.943717945 1 10.41891456 -8.253533337 24.50735379 0.971858971 1.054899251 0.159862932 0.077617226 823.3130933 2552153.715 0.058249435 0.021088655 5.58E-09 8.253533337 0.083040281 SRSTAVMPKVS(ph)LAT(ph)EATRSK ddPTM_A459_MK2206_30min_R1 1 SRSTAVMPKVSLATEATRSK 20 3 H3BT27;H3BPM0;H3BS25;Q9BY12-3;Q9BY12-2;Q9BY12 H3BT27 SCAPER S phase cyclin A-associated protein in the endoplasmic reticulum 2 SRST(0.001)AVMPKVS(0.887)LAT(0.83)EAT(0.141)RS(0.141)K 54.004 0.027109 22015000 3147.3 3434.1 3010.4 2942.8 3390.1 3081.7 3399.9 3082.3 3268.3 2819.1 TRUE FALSE 2879.605608 3210.539466 2806.062435 3169.454966 3255.065138 3256.183191 3173.098874 3055.351776 3608.051481 3168.351391 0.908865606 1.013315466 0.885653796 1.000348312 1.027368728 1.027721609 1.001498408 0.964334886 1.138778827 1 11.62951663 -5.969784991 13.36347169 1.022746215 0.943547483 0.372214831 0.052261387 1.614886621 711.3747976 0.014019704 0.020776775 1.07E-06 5.969784991 -0.079198732 SRT(ph)ASGSSVTSLDGTR ddPTM_A459_MK2206_30min_R1 3 SRTASGSSVTSLDGTR 16 1 E5RJY1;E7ESM1;Q92597-3;Q92597-2;Q92597 E5RJY1 NDRG1 Protein NDRG1 1 SRT(1)ASGSSVTSLDGTR;S(0.091)RT(0.909)ASGSSVTSLDGTR;S(0.385)RT(0.608)AS(0.006)GS(0.001)S(0.001)VTSLDGTR 229.02 2.13E-50 0 1739.4 2627.2 2702.73 2585.83 3243.68 3509.43 3661.75 3603.25 2749.5 2305.64 TRUE FALSE 1591.454896 2456.168802 2519.276218 2784.991075 3114.477357 3708.130894 3417.481339 3571.747165 3035.320364 2591.28009 0.614157807 0.94785925 0.972213011 1.074754939 1.201906876 1.431003506 1.318839037 1.378371709 1.171359428 1 11.33944925 -5.095897723 0.763043949 1.285072808 0.461598873 0.701089384 0.126500649 0.996476559 0.597202227 0.052785138 0.6489389 8.02E-06 5.095897723 -0.823473935 SRT(ph)GSESSQTGTSTT(ph)SSR ddPTM_A459_MK2206_30min_R1 1 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.004)RT(0.973)GS(0.023)ES(0.001)S(0.001)QT(0.005)GT(0.001)S(0.049)T(0.272)T(0.663)S(0.007)SR 207.1 3.08E-09 3830300 2549.7 2716 2927.4 3050.3 3119.8 2958.8 2569.4 3406.6 2275.8 1396 TRUE FALSE 2332.834626 2539.187906 2728.696244 3285.234635 2995.53176 3126.324699 2398.000014 3376.816455 2512.377554 1568.947019 1.48687916 1.618402582 1.73918954 2.093910498 1.909262533 1.992626048 1.528413633 2.152282017 1.601314463 1 10.61558092 -8.542394143 22.64213587 0.99999999 1.818696869 0.564404003 0.215935559 877.088372 1017614.492 0.211184089 0.054527497 2.87E-09 8.542394143 0.818696879 SRT(ph)GSESSQTGTSTTSSR ddPTM_A459_MK2206_30min_R1 2 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.393)RT(0.606)GS(0.001)ESSQTGTSTTSSR;S(0.001)RT(0.942)GS(0.055)ES(0.002)SQTGTSTTSSR 125.59 0.001484 27324000 0 300.88 207.76 321.91 271.62 215.84 183.385 222.36 57.836 0 TRUE FALSE 0 281.2926573 193.6578301 346.703564 260.8008002 228.0606743 171.1517213 220.41593 63.84825917 0 0 SRT(ph)GSESSQTGTSTTSSR ddPTM_A459_MK2206_30min_R2 2 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.345)RT(0.529)GS(0.119)ES(0.005)S(0.002)QTGTSTTSSR;S(0.002)RT(0.998)GSESSQTGTSTTSSR 178.07 7.93E-09 5481000 0 1134.7 1801.67 1768.62 1940.21 2623.21 1884.15 1368.28 2062.46 1117.8 TRUE FALSE 0 1078.352448 1861.736779 1624.118088 1864.027607 2723.038095 1636.758842 1547.118894 2241.849043 1081.326278 0 0.997249831 1.721716023 1.501968575 1.723834559 2.518239084 1.513658621 1.430760471 2.07324014 1 10.07858619 -4.959789528 2.34734442 1.723845467 2.32E-12 0.646433195 0.385145512 0.24586523 2.177490208 0.101519558 0.751300492 1.10E-05 4.959789528 -1.723845467 SRT(ph)LTAVHDAILEDLVFPSEIVGK ddPTM_A459_MK2206_30min_R1 1 SRTLTAVHDAILEDLVFPSEIVGK 24 1 P62081;B5MCP9;A0A2R8Y623 P62081 RPS7 40S ribosomal protein S7 1 S(0.203)RT(0.594)LT(0.203)AVHDAILEDLVFPSEIVGK 63.883 0.0046787 3088100 465.16 316.88 277.85 375.97 362.83 329.34 374.79 471.9 488.61 263.13 TRUE FALSE 425.5956993 296.2510544 258.9903161 404.9272745 348.3777128 347.9869462 349.7884429 467.7742281 539.402758 295.7285309 1.439143183 1.001766902 0.875770475 1.369253326 1.178032135 1.176710766 1.182802491 1.581769018 1.823979432 1 8.208129626 -7.753609611 22.65486373 1.52715569 1.164306396 0.221890086 0.24431026 63.07836027 182517.7426 0.113986514 0.064020248 1.76E-08 7.753609611 -0.362849294 SRT(ph)PPSAPSQSR ddPTM_A459_MK2206_30min_R1 2 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.048)RT(0.951)PPSAPS(0.001)QSR;S(0.003)RT(0.996)PPSAPSQS(0.001)R 113.38 0.0082801 548800000 8337.4 7440 7332.4 6559.4 7892.8 7603 7282.3 6536.6 5920.3 5286.2 TRUE FALSE 7628.260349 6955.654648 6834.697117 7064.606125 7578.413063 8033.47529 6796.511054 6479.451195 6535.736371 5941.094365 1.283982357 1.170769932 1.150410463 1.189108553 1.275592104 1.352187795 1.143983017 1.090615768 1.100089642 1 12.53651299 -7.547222762 4.28468923 1.075119502 1.23118232 0.611137736 0.061898097 0.166921738 7.196485759 0.032652292 0.018853608 2.84E-08 7.547222762 0.156062817 SRT(ph)PPSAPSQSR ddPTM_A459_MK2206_30min_R2 7 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.23)RT(0.77)PPSAPSQSR;S(0.006)RT(0.993)PPSAPSQSR;S(0.024)RT(0.969)PPSAPS(0.002)QS(0.005)R;S(0.003)RT(0.996)PPSAPSQSR;SRT(1)PPSAPSQSR;S(0.151)RT(0.848)PPSAPS(0.001)QSR;S(0.006)RT(0.994)PPSAPSQSR 180.95 0.0010782 239317300 116902 136002.18 117148.21 137345.8 125665 122856 126621.07 101843.31 112967.47 123175.3 TRUE FALSE 125852.107 129248.5095 121053.8729 126124.2088 120730.7607 127531.3712 109995.5714 115154.5803 122793.1763 119156.1 1.056195251 1.084699058 1.015926778 1.058478825 1.013215107 1.070288228 0.923121614 0.966417836 1.030523627 1 16.86249328 -7.244420394 24.98287589 0.977217251 1.048578616 0.522313453 0.032637912 637.7329624 936155.8656 0.012451138 0.009619611 5.70E-08 7.244420394 0.071361365 SRT(ph)PVQDHR ddPTM_A459_MK2206_30min_R2 1 SRTPVQDHR 9 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.236)RT(0.764)PVQDHR 85.973 0.047705 580870000 12791 22090 10232 15726 12740 10544 10926 11712 12969 15215 TRUE FALSE 13770.28879 20993.04272 10573.12977 14441.1355 12239.76359 10945.25931 9491.403076 13242.79861 14097.02018 14718.5358 0.935574638 1.426299668 0.718354728 0.981152996 0.831588397 0.743637782 0.644860549 0.899736142 0.957773271 1 13.84534654 -5.274881892 24.99872678 0.836867406 1.180937176 0.418993762 0.156856113 600.9651433 1117600.687 0.039625382 0.083225304 5.31E-06 5.274881892 0.344069771 SRT(ph)SVQTEDDQLIAGQSAR ddPTM_A459_MK2206_30min_R1 1 SRTSVQTEDDQLIAGQSAR 19 1 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-3;P26232-2;P26232-5;P26232;P26232-6 G3XAM7;P26232-6 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 S(0.217)RT(0.763)S(0.019)VQTEDDQLIAGQSAR 158.35 3.47E-06 17446000 1376 1409.1 1514.1 1152.3 1538.9 1360.5 1653.8 1560 1344.7 1118.6 TRUE FALSE 1258.963974 1317.367334 1411.327111 1241.050346 1477.602354 1437.530334 1543.47802 1546.361084 1484.486377 1257.180613 1.00141854 1.047874363 1.12261285 0.987169491 1.17533021 1.143455697 1.227729734 1.230023012 1.180805973 1 10.29597621 -6.278815259 24.27796344 1.173662131 1.046265213 0.405164954 0.069684804 516.3992439 721522.4154 0.020878304 0.023731023 5.26E-07 6.278815259 -0.127396918 SRTDSLAAT(ph)PPAAK ddPTM_A459_MK2206_30min_R1 1 SRTDSLAATPPAAK 14 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SRTDSLAAT(1)PPAAK 81.651 0.043566 11839000 2470.8 2135.1 2592.6 2505.1 3027.6 3996.1 4412.1 5281.3 4229 3404.9 TRUE FALSE 2260.645485 1996.104602 2416.621535 2698.043236 2907.004281 4222.355729 4117.776859 5235.126151 4668.619684 3826.724718 0.590752054 0.521622209 0.631511727 0.705052868 0.759658584 1.103386326 1.076057768 1.368043572 1.220004058 1 11.90189441 -6.670106923 1.261881205 1.213668979 0.578593502 0.873257201 0.098940084 0.135518517 0.454026768 0.04535451 0.044513176 2.14E-07 6.670106923 -0.635075477 SRTGS(ph)ESSQTGTSTTSSR ddPTM_A459_MK2206_30min_R1 2 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.032)RT(0.355)GS(0.609)ES(0.004)S(0.001)QTGTSTTSSR;S(0.011)RT(0.153)GS(0.669)ES(0.153)S(0.014)QTGTSTTSSR 85.7 0.0041441 13229400 312.95 165.13 62.418 302.97 234.53 226.29 127.152 431.28 0 0 TRUE FALSE 286.3319591 154.380007 58.18124007 326.3048019 225.1881735 239.1023442 118.6699221 427.5093644 0 0 0 SRTGS(ph)ESSQTGTSTTSSR ddPTM_A459_MK2206_30min_R2 1 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.146)RT(0.315)GS(0.537)ES(0.002)S(0.001)QTGTSTTSSR 92.236 0.024057 3649800 3585.7 4428.1 3781.7 3798.6 5154.2 5655.4 4449.5 4160.1 4830.2 5037 TRUE FALSE 3860.223949 4208.206993 3907.779991 3488.242229 4951.82021 5870.62021 3865.275305 4703.839354 5250.322065 4872.643103 0.792223823 0.863639488 0.801983627 0.715882973 1.016249314 1.204812273 0.7932605 0.965356841 1.077510081 1 12.25048884 -6.274749569 24.20013643 1.006749851 0.799058063 0.52118504 0.101393664 446.3982692 811624.3224 0.032495565 0.037076721 5.31E-07 6.274749569 -0.207691788 SRTLTAVHDAILEDLVFPSEIVGK ddPTM_A459_MK2206_30min_R1 1 SRTLTAVHDAILEDLVFPSEIVGK 24 1 P62081;B5MCP9;A0A2R8Y623 P62081 RPS7 40S ribosomal protein S7 0 51.568 0.025357 594830 478.5 261.54 673.78 374.37 452.5 440.86 671.68 382.31 406.74 293.97 FALSE TRUE 437.8010623 244.5136985 628.0456909 403.2040423 434.4759668 465.8211122 626.8734527 378.967504 449.0220785 330.389223 1.32510697 0.740077707 1.900926687 1.220391024 1.315042794 1.409916183 1.897378635 1.147033492 1.359069992 1 8.368022818 -5.242850061 24.99911099 1.419251415 1.03259242 0.191751832 0.305897817 1265.266867 1701538.302 0.07411323 0.19535383 5.72E-06 5.242850061 -0.386658994 SRTPPSAPSQSR ddPTM_A459_MK2206_30min_R1 1 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 106.26 0.025299 1261500 423.04 670.91 554.09 497.23 511.46 559.2 471.69 405.25 473.26 518.28 FALSE TRUE 387.0582265 627.2336371 516.4799146 535.5267408 491.0874652 590.8614207 440.2244207 401.706942 522.4570706 582.4884392 0.66449083 1.076817315 0.886678395 0.919377458 0.843085342 1.014374503 0.755765078 0.689639339 0.896939811 1 9.186085606 -7.283427716 24.93968756 0.809722675 0.9063832 0.042639197 0.128424806 1764.93342 2001820.797 0.050802483 0.03428273 5.21E-08 7.283427716 0.096660525 SRTPS(ph)ASNDDQQE ddPTM_A459_MK2206_30min_R1 1 SRTPSASNDDQQE 13 1 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 SRT(0.001)PS(0.977)AS(0.022)NDDQQE 132.23 0.0068568 52593000 6127.1 5822.6 5957.1 5053.1 5418.7 4431.2 4722.8 4504.6 3667.3 3408.7 TRUE FALSE 5605.95797 5443.547682 5552.748649 5442.290638 5202.861705 4682.090715 4407.750629 4465.216757 4048.528959 3830.99549 1.463316254 1.420922498 1.449427091 1.420594373 1.358096536 1.22216033 1.150549678 1.16554999 1.056782491 1 11.90350361 -7.094607606 0.648453722 1.020969466 1.470578119 0.970786602 0.028012285 0.124685037 0.10857975 0.025437547 0.020090164 8.04E-08 7.094607606 0.449608653 SRTPS(ph)ASNDDQQE ddPTM_A459_MK2206_30min_R2 3 SRTPSASNDDQQE 13 1 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 S(0.001)RT(0.015)PS(0.877)AS(0.108)NDDQQE;S(0.006)RT(0.011)PS(0.754)AS(0.23)NDDQQE;S(0.001)RT(0.001)PS(0.942)AS(0.056)NDDQQE 127.32 0.0092027 531805280 80962.1 104323.4 77886.48 86855.6 81820.2 78761.9 77127.2 62327.3 76314.2 57593.9 TRUE FALSE 87160.62063 99142.85166 80483.17637 79759.21964 78607.52783 81759.2393 67000.30599 70473.69211 82951.87117 55714.61576 1.564412128 1.77947654 1.444561275 1.431567257 1.410895988 1.467464833 1.202562471 1.264904929 1.488870919 1 15.76576822 -1.522878745 0.073629297 0.628667703 3.325265741 0.662440155 0.116709545 136.1697275 0.739877785 4.491626461 37.75966545 0.03 1.522878745 2.696598038 SRTPSAS(ph)NDDQQE ddPTM_A459_MK2206_30min_R1 1 SRTPSASNDDQQE 13 1 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 SRT(0.008)PS(0.116)AS(0.876)NDDQQE 105.99 0.033758 62694000 737.63 706.92 859.68 490.22 550.19 678.97 587.06 542.23 490.37 579.14 TRUE FALSE 674.8906951 660.8993795 801.3273168 527.9768293 528.2747673 717.4126946 547.8982986 537.4893403 541.3457163 650.8882355 1.036876469 1.015380742 1.231128899 0.811163577 0.811621318 1.102205656 0.841770167 0.825778238 0.831703028 1 9.346266028 -5.77409916 24.99997388 0.885587549 1.086553936 0.449918532 0.103855522 205.5302986 405871.7856 0.029752119 0.044460035 1.68E-06 5.77409916 0.200966386 SRTS(ph)PAPWK ddPTM_A459_MK2206_30min_R2 1 SRTSPAPWK 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.316)RT(0.316)S(0.367)PAPWK 67.08 0.045835 101370000 130210 140290 116940 119060 116880 87932 130490 102590 96764 112230 TRUE FALSE 140178.9777 133323.4026 120838.7212 109332.4171 112290.7039 91278.31388 113356.5063 115998.8652 105180.3578 108567.9443 1.291163599 1.228018118 1.113023941 1.007041423 1.034289676 0.840748293 1.044106591 1.06844489 0.968797544 1 16.72823867 -5.371311017 1.503459076 0.991015836 1.298723624 0.770229768 0.058364889 0.239102227 0.937549438 0.018519855 0.077890255 4.25E-06 5.371311017 0.307707789 SRTS(ph)VQTEDDQLIAGQSAR ddPTM_A459_MK2206_30min_R1 1 SRTSVQTEDDQLIAGQSAR 19 1 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-3;P26232-2;P26232-5;P26232;P26232-6 G3XAM7;P26232-6 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 S(0.2)RT(0.2)S(0.599)VQTEDDQLIAGQSAR 136.11 9.90E-05 14408000 2046.2 1881.6 1701.5 1729.2 2342.4 1937.1 2293.4 1760.9 1722.4 1760.6 TRUE FALSE 1872.159945 1759.107498 1586.006921 1862.383284 2249.097248 2046.776928 2140.411471 1745.504637 1901.449644 1978.71642 0.946148688 0.889014454 0.801533208 0.941207777 1.136644557 1.034396292 1.081717142 0.882139866 0.960951061 1 10.95034915 -6.003180954 24.99558166 1.016529657 0.878487022 0.428991856 0.071435185 131.9557999 1036914.315 0.021632336 0.031396772 9.93E-07 6.003180954 -0.138042635 SRTS(ph)VQTEDDQLIAGQSAR ddPTM_A459_MK2206_30min_R2 1 SRTSVQTEDDQLIAGQSAR 19 1 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-3;P26232-2;P26232-5;P26232;P26232-6 G3XAM7;P26232-6 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 S(0.007)RT(0.122)S(0.871)VQTEDDQLIAGQSAR 138.55 0.00068915 14770000 28001 32578 27840 32386 27789 37241 32334 26177 34632 27159 TRUE FALSE 30144.77809 30960.22389 28768.1717 29739.9602 26697.86423 38658.23235 28088.50696 29598.42378 37644.22876 26272.80405 1.147375744 1.178413382 1.094979114 1.131967495 1.016178714 1.471416308 1.069109597 1.126580312 1.432821129 1 14.68128256 SRTSVQT(ph)EDDQLIAGQSAR ddPTM_A459_MK2206_30min_R2 1 SRTSVQTEDDQLIAGQSAR 19 1 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-3;P26232-2;P26232-5;P26232;P26232-6 G3XAM7;P26232-6 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 S(0.004)RT(0.016)S(0.064)VQT(0.916)EDDQLIAGQSAR 122.1 0.0043868 15576000 23560 28555 29465 31850 30377 29472 31945 24674 32538 30550 TRUE FALSE 25363.77171 27137.00022 30447.34839 29247.75312 29184.24635 30593.57761 27750.58313 27898.97652 35368.09642 29553.156 0.858242406 0.918243731 1.030257086 0.989665981 0.987517081 1.035205093 0.93900574 0.944026977 1.196762079 1 14.85102458 -5.05837382 3.089935937 1.009364213 0.862271036 0.366857326 0.06833034 0.285339315 5.124924083 0.017485933 0.072908114 8.74E-06 5.05837382 -0.147093177 SRWDETPASQMGGST(ph)PVLTPGK ddPTM_A459_MK2206_30min_R1 2 SRWDETPASQMGGSTPVLTPGK 22 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 SRWDETPASQMGGS(0.273)T(0.718)PVLT(0.009)PGK;SRWDETPASQMGGS(0.258)T(0.706)PVLT(0.036)PGK 95.889 0.00028818 39115000 10087.3 10337.7 10769.5 9270.5 10428.2 8572.5 9328 9844.8 9276.6 8136.8 TRUE FALSE 9229.322164 9664.713851 10038.49635 9984.515516 10012.82271 9057.867542 8705.74614 9758.727952 10240.93577 9144.848214 1.009237327 1.056847924 1.097721483 1.091818616 1.094914041 0.99048856 0.951983667 1.067128478 1.119858474 1 13.15874351 -6.752150525 24.98964973 1.025468103 1.072111454 0.170555133 0.048649383 385.8393744 1038015.274 0.017549391 0.017328128 1.77E-07 6.752150525 0.046643351 SRWDETPASQMGGST(ph)PVLTPGK ddPTM_A459_MK2206_30min_R2 2 SRWDETPASQMGGSTPVLTPGK 22 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 SRWDETPASQMGGS(0.009)T(0.99)PVLT(0.001)PGK;SRWDETPASQMGGS(0.018)T(0.981)PVLTPGK 119.18 4.57E-05 33456000 156585 228359 198959 235201 244161 230444 240653 180925 221417 224291 TRUE FALSE 168573.268 217019.0241 205592.1938 215984.3259 234574.0123 239213.7079 209054.972 204572.5187 240675.4504 216972.403 0.776934143 1.000214871 0.947549969 0.99544607 1.081123724 1.102507529 0.963509502 0.942850408 1.109244526 1 17.72715203 -4.104753228 1.247320043 1.022763127 3.45E-11 0.598834415 0.058566276 4.895654337 1.959207748 0.017867743 9.72736991 7.86E-05 4.104753228 -1.022763127 SRYMELY(ph)DLNR ddPTM_A459_MK2206_30min_R1 1 SRYMELYDLNR 11 1 J3QKP7;J3QLW0;H3BRL0;Q9BXC9 J3QKP7 BBS2 Bardet-Biedl syndrome 2 protein 1 S(0.097)RY(0.055)MELY(0.849)DLNR 108.57 0.041027 16066000 574.95 629.47 529.84 555.11 528.64 466.31 528.73 480.55 287.96 405.95 TRUE FALSE 526.0474833 588.4913886 493.875937 597.8646684 507.5831494 492.7120692 493.4593864 476.348602 317.8944725 456.2421508 1.153000621 1.28986633 1.08248643 1.310410858 1.112530152 1.079935443 1.081573427 1.044069692 0.696766995 1 8.833655929 -7.593013177 1.086097557 0.870222002 1.193673345 0.568383679 0.105491282 0.363442651 0.787626696 0.08258652 0.036410167 2.55E-08 7.593013177 0.323451342 SS(ph)AEAQTPEDTPNK ddPTM_A459_MK2206_30min_R1 1 SSAEAQTPEDTPNK 14 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 S(0.025)S(0.975)AEAQTPEDTPNK 274.38 8.82E-45 4649900 2338.3 2609.6 1888 1806.7 2726.8 2142.9 3580.4 2534.1 4223.3 5869.8 TRUE FALSE 2139.415306 2439.714566 1759.84782 1945.852347 2618.185782 2264.229146 3341.558049 2511.944631 4662.327148 6596.995139 0.324301483 0.369822095 0.266765062 0.294960403 0.396875506 0.343221285 0.506527287 0.38077103 0.706734968 1 12.68759333 -8.60645584 0.761842894 1.008662955 0.325976936 0.920036427 0.06128244 0.192251516 0.245980678 0.057653594 0.021445016 2.47E-09 8.60645584 -0.682686019 down SS(ph)AEAQTPEDTPNK ddPTM_A459_MK2206_30min_R2 1 SSAEAQTPEDTPNK 14 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 S(0.119)S(0.881)AEAQTPEDTPNK 340.47 2.38E-145 9826600 83913 44855 55814 41566 36380 42867 57368 50851 44047 51485 TRUE FALSE 90337.4438 42627.56593 57674.8109 38169.92484 34951.53841 44498.33372 49835.51269 57497.4003 47878.12844 49805.04867 1.813821012 0.85588845 1.158011335 0.766386659 0.701766976 0.893450261 1.000611665 1.154449234 0.961310745 1 15.60400437 -4.757987598 24.99943849 0.942196908 1.813822231 0.775534205 0.140458909 48.76648639 353134.8886 0.037658929 0.267339339 1.75E-05 4.757987598 0.871625323 SS(ph)DEENGPPS(ph)SPDLDR ddPTM_A459_MK2206_30min_R2 1 SSDEENGPPSSPDLDR 16 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 S(0.4)S(0.6)DEENGPPS(0.769)S(0.231)PDLDR 192.24 2.00E-05 9296900 39944 41414 39678 47424 45597 42245 48002 40293 38683 53296 TRUE FALSE 43002.14335 39357.44098 41000.84472 43549.3075 43806.63267 43852.66308 41699.27974 45559.43345 42047.57742 51556.95588 0.834070643 0.763377905 0.795253405 0.844683453 0.849674538 0.850567345 0.808800268 0.883671905 0.815555858 1 15.65387946 -14.52287874 0.18277222 1.713737877 0.793342424 0.749598456 0.030440405 65.66961294 0.633386371 17.02402561 0.091398598 3.00E-15 14.52287874 -0.920395453 SS(ph)DEENGPPSS(ph)PDLDR ddPTM_A459_MK2206_30min_R2 1 SSDEENGPPSSPDLDR 16 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 S(0.406)S(0.594)DEENGPPS(0.063)S(0.937)PDLDR 150.9 0.003942 11811000 19566 22706 18238 23121 26969 26589 28105 20274 17161 22828 TRUE FALSE 21063.988 21578.45306 18846.04582 21231.94034 25910.06155 27600.86303 24414.77974 22923.88141 18653.63276 22083.12423 0.953849998 0.977146749 0.853413929 0.961455459 1.173296916 1.249862236 1.1055854 1.038072384 0.844700803 1 14.43065667 -6.084775029 7.068105451 1.0809225 0.928888394 0.274294155 0.105140143 0.348394701 25.04843807 0.033750968 0.043858665 8.23E-07 6.084775029 -0.152034106 SS(ph)DGEDEQQVPK ddPTM_A459_MK2206_30min_R2 1 SSDGEDEQQVPK 12 0 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 S(0.079)S(0.921)DGEDEQQVPK 159.58 0.00030223 0 21736 17000 20357 18105 15157 14138 21162 13966 13067 18197 TRUE FALSE 23400.12487 16155.80472 21035.69222 16625.76358 14561.86002 14676.0315 18383.40398 15791.40415 14203.54404 17603.23338 1.329308336 0.917774841 1.194990248 0.944472145 0.827226437 0.833712261 1.044319733 0.897074067 0.806871314 1 14.10355283 -5.875413398 5.539414151 0.899133625 1.123191963 0.462508067 0.118100533 0.192482848 8.576736463 0.03229612 0.04871819 1.33E-06 5.875413398 0.224058338 SS(ph)DGRPDSGGTLR ddPTM_A459_MK2206_30min_R1 1 SSDGRPDSGGTLR 13 1 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(0.001)S(0.996)DGRPDS(0.003)GGTLR 126.1 0.0097886 4747600 1396.3 1554.7 2020 1546.5 1748.9 1784.4 1676.7 1663.8 1385.8 1289.5 TRUE FALSE 1277.537353 1453.488747 1882.888028 1665.611698 1679.23761 1885.431186 1564.850402 1649.253572 1529.858869 1449.252995 0.881514378 1.002922714 1.29921279 1.149289809 1.158691833 1.300967597 1.079763442 1.138002528 1.055618911 1 10.50109375 -5.028891108 5.754212617 1.156426375 0.906572196 0.469925069 0.091079389 0.123082063 13.11499047 0.022688009 0.069940183 9.36E-06 5.028891108 -0.24985418 SS(ph)DGSLSHEEDLAK ddPTM_A459_MK2206_30min_R1 2 SSDGSLSHEEDLAK 14 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YEF9;E9PJZ7 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 S(0.225)S(0.773)DGS(0.002)LSHEEDLAK;S(0.228)S(0.772)DGSLSHEEDLAK 161.87 0.00027992 8117000 4322.1 3023.8 3301 2682.7 3888.3 3237.3 3567.8 3344.4 3294.3 3062.8 TRUE FALSE 3954.482699 2826.95007 3076.937317 2889.322019 3733.420777 3420.593128 3329.798572 3315.160263 3636.754274 3442.242787 1.148809931 0.821252377 0.89387574 0.839371944 1.084589615 0.993710595 0.967334025 0.963081476 1.056507196 1 11.74913314 -6.260706546 24.99999893 1.005989739 0.916075581 0.170699059 0.090435059 114.7691079 3915250.351 0.026854207 0.032594962 5.49E-07 6.260706546 -0.089914158 SS(ph)FMSR ddPTM_A459_MK2206_30min_R2 2 SSFMSR 6 0 Q16513-3;Q16513-2;Q16513;Q16513-4;B1AL79;Q16513-5;A0A3B3IUG4 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 S(0.199)S(0.789)FMS(0.013)R;S(0.225)S(0.774)FMS(0.001)R 110.12 0.025401 12494900 59730 84055 72277 74874 67134 83202 86603 57765 67849 75407 TRUE FALSE 64302.97472 79880.95093 74686.67911 68756.55469 64497.98184 86368.31041 75231.92207 65315.08384 73750.38338 72946.47577 0.881508998 1.095062511 1.023855893 0.942561707 0.884182288 1.183995656 1.031330455 0.895383679 1.011020513 1 16.15455066 -4.728192364 24.13898188 1.005108981 0.881507632 0.165496761 0.084715533 6519.257795 4732881.184 0.021757449 3.557000332 1.87E-05 4.728192364 -0.12360135 SS(ph)FSQHAR ddPTM_A459_MK2206_30min_R2 1 SSFSQHAR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.204)S(0.796)FSQHAR 97.965 0.013125 34192000 11541 28844 17621 30618 33824 37563 29259 27589 26071 21625 TRUE FALSE 12424.58783 27411.6489 18208.47535 28116.41146 32495.89981 38992.48629 25417.25815 31194.97703 28338.60845 20919.37802 0.593927211 1.310347223 0.870411889 1.344036684 1.553387475 1.863940995 1.215010223 1.491200025 1.354658271 1 14.35255234 -4.522039824 0.787117075 1.434261877 2.62E-18 0.407332331 0.265334123 3.687018644 1.323914609 0.100985661 5.098501817 3.01E-05 4.522039824 -1.434261877 SS(ph)GFISELPSEEGK ddPTM_A459_MK2206_30min_R1 1 SSGFISELPSEEGK 14 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.238)S(0.762)GFISELPSEEGK 348.58 0 0 3570.3 4697.1 4831.9 3963 3667 3449 4110.8 4239.2 4119 3754.8 TRUE FALSE 3266.627237 4391.317936 4503.92409 4268.230947 3520.935625 3644.279399 3836.576033 4202.137121 4547.18479 4219.972971 0.774087242 1.040603332 1.067287426 1.011435612 0.834350279 0.863578849 0.909147063 0.995773468 1.077538842 1 12.04301804 -7.963522417 4.935581814 1.038946823 0.935747225 0.201929856 0.089117453 0.336343647 19.647314 0.057337663 0.025374644 1.09E-08 7.963522417 -0.103199598 SS(ph)GFISELPSEEGK ddPTM_A459_MK2206_30min_R2 1 SSGFISELPSEEGK 14 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.037)S(0.963)GFISELPSEEGK 233.97 9.70E-14 7893100 54220 73086 72851 64769 71340 54461 70397 45225 55578 65164 TRUE FALSE 58371.12489 69456.65552 75279.81598 59477.16551 68538.83315 56533.55152 61153.78934 51136.06278 60412.07398 63037.70402 0.92597162 1.101827178 1.194203012 0.943517319 1.087267283 0.896821234 0.970114478 0.811198053 0.95834826 1 15.94392737 -6.764096995 24.99355316 0.918172398 1.05543927 0.334164732 0.086380476 75.77223688 712593.9044 0.029424313 0.027132395 1.72E-07 6.764096995 0.137266872 SS(ph)GGGYGGGPAGGHGGNR ddPTM_A459_MK2206_30min_R1 1 SSGGGYGGGPAGGHGGNR 18 0 Q9H2U1-3;Q9H2U1-2;Q9H2U1 Q9H2U1-3 DHX36 ATP-dependent RNA helicase DHX36 1 S(0.415)S(0.585)GGGYGGGPAGGHGGNR 154.56 2.75E-05 1017500 425.38 392.89 435.92 334.76 400.54 392.14 544.25 372.98 238.55 479.04 TRUE FALSE 389.1991972 367.3127896 406.3309649 360.5432732 384.5856436 414.3426279 507.9440755 369.7190752 263.3481262 538.3870918 0.722898456 0.68224665 0.754718995 0.669672952 0.714329243 0.769599855 0.943455152 0.686716084 0.489142719 1 9.07250001 -6.738814647 6.339019987 0.768659497 0.707336693 0.062187924 0.131710715 0.642495945 87.992748 0.045190554 0.043770179 1.82E-07 6.738814647 -0.061322804 SS(ph)GGREDLESSGLQR ddPTM_A459_MK2206_30min_R1 2 SSGGREDLESSGLQR 15 1 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 S(0.382)S(0.618)GGREDLESSGLQR;S(0.148)S(0.852)GGREDLESSGLQR 200 9.64E-05 57716000 9638.5 9117.2 9433.5 8248.6 10180 9379.9 10147.5 9768.9 8745.4 7360.8 TRUE FALSE 8818.694961 8523.668623 8793.180303 8883.908601 9774.509043 9910.981832 9470.57879 9683.491537 9654.515626 8272.711475 1.06599813 1.030335537 1.062913935 1.073881112 1.181536316 1.198033059 1.144797424 1.170534179 1.16703159 1 13.01414455 -6.134860617 4.490162413 1.154708907 1.053273792 0.378331312 0.052830881 0.205447573 6.584991491 0.014903294 0.019616547 7.33E-07 6.134860617 -0.101435115 SS(ph)GGREDLESSGLQR ddPTM_A459_MK2206_30min_R2 1 SSGGREDLESSGLQR 15 1 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 S(0.428)S(0.572)GGREDLESSGLQR 142.1 0.0018171 21794000 33974 48225 47947 48791 51683 44356 50940 34896 35711 43993 TRUE FALSE 36575.07556 45830.21663 49545.52905 44804.61923 49653.66573 46043.99866 44251.51681 39457.02702 38817.07823 42557.51201 0.859427016 1.07690075 1.164201729 1.052801658 1.166742683 1.081924118 1.039805071 0.927146 0.91210873 1 15.37712619 -7.650258782 3.926665915 0.939590126 1.074838276 0.295278114 0.082532633 0.26575527 7.568700645 0.043282038 0.023305604 2.24E-08 7.650258782 0.135248151 SS(ph)GHSSSELS(ph)PDAVEK ddPTM_A459_MK2206_30min_R2 1 SSGHSSSELSPDAVEK 16 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.178)S(0.404)GHS(0.285)S(0.132)S(0.001)ELS(1)PDAVEK 163 0.0006412 10510000 20502 37950 33262 53811 61474 62299 56174 39098 48349 48611 TRUE FALSE 22071.64888 36065.45818 34370.93848 49414.46917 59060.22188 64669.8321 48798.28632 44208.24284 52554.30863 47024.82705 0.469361617 0.766945047 0.730910471 1.050816606 1.255937035 1.375227431 1.037713255 0.940104315 1.117586431 1 15.52113502 -5.701845916 2.350399363 1.130349433 0.626343403 0.71046238 0.135004747 0.172795602 1.938227012 0.043416669 0.085361107 1.99E-06 5.701845916 -0.50400603 SS(ph)GPYGGGGQYFAKPR ddPTM_A459_MK2206_30min_R1 1 SSGPYGGGGQYFAKPR 16 1 F8W6I7;P09651-2;P09651;P09651-3;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 1 S(0.349)S(0.651)GPYGGGGQYFAKPR 233.28 6.65E-15 35832000 2842.8 2659.5 2610.1 2937.7 2293.7 1995.2 2931.2 2414.7 2221.6 1942.6 TRUE FALSE 2601.004932 2486.366067 2432.933684 3163.962163 2202.337072 2108.1665 2735.664996 2393.588532 2452.54327 2183.263954 1.191337826 1.138829807 1.114356182 1.449189026 1.008736057 0.965603126 1.253016151 1.096334929 1.123337957 1 11.09227085 SS(ph)GSETEQVVDFSDR ddPTM_A459_MK2206_30min_R2 1 SSGSETEQVVDFSDR 15 0 O95251;O95251-4;O95251-2 O95251 KAT7 Histone acetyltransferase KAT7 1 S(0.037)S(0.907)GS(0.056)ETEQVVDFSDR 159.64 0.00013585 13454000 11271 15501 14379 18581 17153 19264 20564 15968 16171 19787 TRUE FALSE 12133.91643 14731.24288 14858.38868 17062.87286 16479.48703 19997.10502 17863.9221 18055.07243 17577.52435 19141.35181 0.633911155 0.769603058 0.776245525 0.891414203 0.860936427 1.044707041 0.933263349 0.943249599 0.918301096 1 14.2244051 -5.103509956 0.643412598 0.964919701 0.526324992 0.837795527 0.046579174 0.920255957 0.380714693 0.023174205 0.279756387 7.88E-06 5.103509956 -0.438594709 SS(ph)GSPYGGGYGSGGGSGGYGSR ddPTM_A459_MK2206_30min_R2 1 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 S(0.019)S(0.619)GS(0.363)PYGGGYGSGGGSGGYGSR 291.28 3.35E-92 70521000 5024.4 5845 3853.3 7136.6 5886.2 5925.7 5374.6 4650.5 5508.5 5780.6 TRUE FALSE 5409.071927 5554.745799 3981.767099 6553.516951 5655.078212 6151.206666 4668.908564 5258.336318 5987.619373 5591.979495 0.967291087 0.993341589 0.71204966 1.171949389 1.011283789 1.100005225 0.834929486 0.940335408 1.07075131 1 12.44914336 -5.770648609 24.99999698 1.011429864 0.901138835 0.215368343 0.110499272 346.5994164 940903.1387 0.03174112 0.047826278 1.70E-06 5.770648609 -0.110291029 SS(ph)IDSQASLSGPLSGGAPGAGAR ddPTM_A459_MK2206_30min_R1 1 SSIDSQASLSGPLSGGAPGAGAR 23 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(0.338)S(0.662)IDSQASLSGPLSGGAPGAGAR 460.53 0 13619000 784.82 762.75 613.33 612.9 621.12 862.11 938.95 689.8 761.74 860.99 TRUE FALSE 718.0669377 713.0948364 571.6988684 660.1056642 596.3794752 910.9219232 876.3143587 683.7691513 840.9255989 967.6559413 0.742068443 0.736930148 0.590807997 0.682169804 0.616313557 0.941369638 0.90560531 0.706624247 0.869033675 1 9.918350365 -6.758370579 24.99994457 0.867508017 0.6730432 0.613025432 0.083220935 61.50645485 501062.1403 0.028828287 0.027657122 1.74E-07 6.758370579 -0.194464817 SS(ph)IDSQASLSGPLSGGAPGAGAR ddPTM_A459_MK2206_30min_R2 2 SSIDSQASLSGPLSGGAPGAGAR 23 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(0.229)S(0.771)IDSQASLSGPLSGGAPGAGAR;S(0.028)S(0.972)IDSQASLSGPLSGGAPGAGAR 314.94 2.55E-124 27214000 53429 46114 45229 50305 55461 57588 55564 47752 42762 61067 TRUE FALSE 57519.56532 43824.04582 46736.91229 46194.92058 53283.32247 59779.55169 48268.38006 53993.35036 46481.36146 59074.38879 0.973680244 0.741845099 0.791153548 0.781978816 0.901969933 1.011936863 0.817077943 0.913989149 0.786827632 1 15.85024518 -6.275747525 23.36314761 0.901920441 0.814212273 0.179109444 0.086343047 560.1868797 914702.2044 0.026169317 0.029839777 5.30E-07 6.275747525 -0.087708168 SS(ph)ITEPEGPNGPNIQK ddPTM_A459_MK2206_30min_R1 2 SSITEPEGPNGPNIQK 16 0 Q13625-2;Q13625;Q13625-3 Q13625-2 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 S(0.02)S(0.978)IT(0.003)EPEGPNGPNIQK;S(0.01)S(0.99)ITEPEGPNGPNIQK 316.54 5.37E-103 20090100 3770.1 3770 3792.5 2795.6 3172.6 3238.9 4083.3 3572.7 4689.6 5178.7 TRUE FALSE 3449.433197 3524.572315 3535.075667 3010.917596 3046.228624 3422.283719 3810.910507 3541.464261 5177.100702 5820.276453 0.592657965 0.605567853 0.607372467 0.51731522 0.523382119 0.587993328 0.654764518 0.608470111 0.889493952 1 12.50687196 -8.344630703 2.182713973 1.003681837 0.580373895 0.934667727 0.038375114 0.072746209 0.669578257 0.039967522 0.011314491 4.52E-09 8.344630703 -0.423307942 SS(ph)ITEPEGPNGPNIQK ddPTM_A459_MK2206_30min_R2 2 SSITEPEGPNGPNIQK 16 0 Q13625-2;Q13625;Q13625-3 Q13625-2 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 S(0.16)S(0.835)IT(0.004)EPEGPNGPNIQK;S(0.205)S(0.795)ITEPEGPNGPNIQK 264.31 7.18E-65 3391600 33526 27947 34900 33874 26365 28662 36512 25583 24226 39817 TRUE FALSE 36092.77634 26559.19262 36063.54858 31106.38584 25329.77763 29752.75249 31717.93054 28926.78594 26333.13369 38517.77455 0.9370421 0.689530819 0.936283287 0.807585231 0.657612698 0.772442148 0.823462178 0.750998371 0.683661868 1 15.23323673 -4.73565254 24.72971118 0.784784812 0.937042939 0.147801328 0.103947562 4217.108678 4043987.379 0.024761317 1.853461696 1.84E-05 4.73565254 0.152258127 SS(ph)LAELMAR ddPTM_A459_MK2206_30min_R2 1 SSLAELMAR 9 0 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 S(0.054)S(0.946)LAELMAR 143.4 0.0020367 1645300 9113.9 11710 11200 11638 12464 10425 11849 9134.6 7639.6 10758 TRUE FALSE 9811.667191 11128.49843 11573.40241 10687.13817 11974.60073 10821.73068 10293.21207 10328.52358 8304.078599 10406.96734 0.942797923 1.069331541 1.11208213 1.026921467 1.150633065 1.03985439 0.989069316 0.992462381 0.79793453 1 13.3452621 -7.704360461 1.796770377 0.906045464 1.061733215 0.401195039 0.071420873 0.337558104 2.11790196 0.049564449 0.020902107 1.98E-08 7.704360461 0.155687751 SS(ph)LETLEDIEENAPLR ddPTM_A459_MK2206_30min_R1 1 SSLETLEDIEENAPLR 16 0 V9GYB4;Q8TDN4-2;Q8TDN4 V9GYB4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 S(0.002)S(0.997)LET(0.001)LEDIEENAPLR 238.12 2.50E-21 2527000 307.12 160.59 285.96 194.23 197.57 304.45 365.77 307.02 313.08 496.38 TRUE FALSE 280.9978312 150.1355618 266.5498319 209.1896283 189.7003685 321.6876959 341.3701507 304.3357565 345.6257864 557.8753019 0.503692905 0.269120288 0.477794645 0.374975604 0.340040808 0.576630109 0.611911209 0.545526492 0.619539501 1 9.123798872 -9.216893137 0.296551786 1.130869028 0.346019332 0.8179613 0.082025077 1.685349735 0.273872266 0.391846647 0.111341827 6.07E-10 9.216893137 -0.784849696 SS(ph)LGSHQLPR ddPTM_A459_MK2206_30min_R2 2 SSLGSHQLPR 10 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.226)S(0.73)LGS(0.044)HQLPR;S(0.208)S(0.791)LGSHQLPR 132.14 0.0016472 21179000 74865 94640 85526 95784 106635 103267 99608 68795 91128 77186 TRUE FALSE 80596.72196 89940.31522 88377.39415 87958.1408 102447.9741 107196.898 86529.34995 77786.74271 99054.14872 74667.42714 1.07940939 1.204545525 1.18361376 1.177998816 1.372057107 1.43565812 1.15886342 1.041776122 1.326604552 1 16.1881914 -12.55406604 0.634568574 5.33E-06 1.221697377 0.23641562 0.118265343 1354.436184 47.05330113 1868.008783 0.048655595 2.79E-13 12.55406604 1.221692049 SS(ph)LGSLQTPEAVTTR ddPTM_A459_MK2206_30min_R2 1 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.169)S(0.831)LGSLQTPEAVTTR 137.39 0.00040182 17224000 56018 61645 50870 57670 60150 60322 55051 36023 47754 56256 TRUE FALSE 60306.78115 58583.79894 52565.98041 52958.17652 57788.20877 62617.59598 47822.73757 40731.32979 51907.5566 54420.37133 1.108165558 1.076504947 0.965924692 0.973131481 1.061885602 1.150627871 0.878765367 0.748457403 0.953825844 1 15.73185918 -7.289082168 21.97029958 0.874300043 1.049371201 0.47868325 0.080845223 137.4600255 109250.7231 0.034390375 0.023198293 5.14E-08 7.289082168 0.175071159 SS(ph)LPNGEGLQLK ddPTM_A459_MK2206_30min_R1 2 SSLPNGEGLQLK 12 0 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 S(0.117)S(0.883)LPNGEGLQLK;S(0.155)S(0.845)LPNGEGLQLK 120.9 0.0039197 9109700 3945.1 4293.5 4064.1 3158.2 3079.1 3280.1 3905.8 2838.1 4190.2 4766 TRUE FALSE 3609.548528 4013.99237 3788.240215 3401.445111 2956.452927 3465.816427 3645.251209 2813.286791 4625.786285 5356.448061 0.67386979 0.749375766 0.707229898 0.63501878 0.551942797 0.647036317 0.680535154 0.525214985 0.86359211 1 12.38706093 -8.479646518 4.87020585 0.999117344 0.650256963 0.774629801 0.063638558 0.081619996 4.534783619 0.065079931 0.016946268 3.31E-09 8.479646518 -0.348860381 SS(ph)LSASHPMVGK ddPTM_A459_MK2206_30min_R1 3 SSLSASHPMVGK 12 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.039)S(0.955)LS(0.004)AS(0.001)HPMVGK;S(0.029)S(0.733)LS(0.063)AS(0.176)HPMVGK;S(0.063)S(0.935)LS(0.002)ASHPMVGK 150.14 0.0018234 113576600 35915.6 23552.5 28676.8 22119.5 39447.6 36548 34934.9 32017.4 22140.8 20473.7 TRUE FALSE 32860.78962 22019.22797 26730.29871 23823.14772 37876.31856 38617.31618 32604.45656 31737.47525 24442.41539 23010.13652 1.428100593 0.956935998 1.161674929 1.035332741 1.646071005 1.6782741 1.416960587 1.379282353 1.062245561 1 14.48998192 -4.463564017 22.67655122 1.285675406 4.580524925 0.030042694 0.250532489 2072.715578 842234.6905 0.065221785 21447.76687 3.44E-05 4.463564017 3.29484952 SS(ph)LSGDEEDELFK ddPTM_A459_MK2206_30min_R2 4 SSLSGDEEDELFK 13 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 S(0.202)S(0.798)LSGDEEDELFK;S(0.245)S(0.755)LS(0.001)GDEEDELFK;S(0.205)S(0.795)LSGDEEDELFK;S(0.112)S(0.888)LSGDEEDELFK 243.3 4.20E-18 24876600 93836 105235 107743 104884 98842 78050 120278 87118.2 85854.3 110545 TRUE FALSE 101020.1563 100009.1829 111335.0978 96314.64169 94960.96644 81020.24744 104485.3541 98504.84786 93321.75182 106937.9257 0.94466164 0.935207806 1.041118921 0.900659341 0.888000827 0.757638106 0.977065465 0.921140439 0.872672171 1 16.70641407 -5.95501934 24.51029874 0.895184307 0.969996148 0.186625249 0.066897269 170.1758986 92728.65676 0.018882625 0.028007445 1.11E-06 5.95501934 0.074811841 SS(ph)LYFPR ddPTM_A459_MK2206_30min_R1 1 SSLYFPR 7 0 B8ZZW8;E7ENZ2;E9PG19;O94868-2;O94868 B8ZZW8 FCHSD2 F-BAR and double SH3 domains protein 2 1 S(0.222)S(0.777)LY(0.002)FPR 95.815 0.023547 4061900 2110.3 2038.8 1871.2 1803 1828.7 1711.2 1815.9 1873.4 1458.2 1545 TRUE FALSE 1930.807903 1906.073749 1744.188157 1941.867372 1755.859007 1808.086665 1694.764624 1857.021061 1609.785108 1736.406264 1.111956311 1.09771186 1.004481609 1.118325482 1.011202875 1.041280893 0.976018492 1.069462314 0.927078611 1 10.76188882 -4.870511886 0.298064892 0.981234936 1.202399612 0.431136762 0.04517087 7.28114027 0.553867751 0.049926858 0.588259475 1.35E-05 4.870511886 0.221164676 SS(ph)MEMEGIFNHK ddPTM_A459_MK2206_30min_R1 1 SSMEMEGIFNHK 12 0 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2 E7EPJ7 TRIO Triple functional domain protein 1 S(0.197)S(0.803)MEMEGIFNHK 110.51 0.0071885 5344400 2163.4 1836.2 2051.9 2034.1 2436.2 2251.3 2366.3 2130.5 1760.5 1470 TRUE FALSE 1979.39147 1716.663046 1912.622745 2190.766734 2339.160995 2378.76666 2208.448445 2111.873263 1943.510275 1652.114698 1.198095672 1.039070137 1.157681575 1.326037918 1.415858716 1.439831425 1.336740389 1.278284895 1.176377329 1 10.69009813 -5.677074623 4.672632596 1.307874402 1.11496388 0.216830882 0.125008253 0.253044061 9.814205056 0.034173403 0.060195363 2.10E-06 5.677074623 -0.192910523 SS(ph)MEMEGIFNHK ddPTM_A459_MK2206_30min_R2 3 SSMEMEGIFNHK 12 0 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2 E7EPJ7 TRIO Triple functional domain protein 1 S(0.217)S(0.783)MEMEGIFNHK;S(0.123)S(0.877)MEMEGIFNHK;S(0.127)S(0.873)MEMEGIFNHK 111.88 0.012372 12839600 47722 61536 58153 61215 62933 52371 67913 48708 47738 62450 TRUE FALSE 51375.63301 58480.21172 60091.792 56213.53868 60461.93421 54364.0151 58995.94152 55074.30284 51890.16495 60412.26161 0.85041731 0.968018911 0.994695289 0.930498829 1.000822227 0.899883793 0.976555751 0.911641137 0.858934322 1 15.88255378 -9.532153952 10.07357453 0.999986276 0.936956431 0.133077296 0.0505757 0 0 0.048331402 0.011722087 2.94E-10 9.532153952 -0.063029846 SS(ph)MSGLHLVK ddPTM_A459_MK2206_30min_R1 1 SSMSGLHLVK 10 0 Q13085;A0A0C4DGT1;Q13085-4;Q13085-2 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase 1 S(0.022)S(0.735)MS(0.242)GLHLVK 72.34 0.045276 11675000 11747 9385.5 13317 10170 16015 11674 15175 13116 10476 8195.2 TRUE FALSE 10747.85596 8774.502244 12413.07914 10953.29516 15377.08864 12334.97179 14162.70344 13001.32819 11565.01769 9210.483247 1.166915533 0.952664698 1.347712038 1.189220464 1.669520287 1.339231771 1.537672135 1.411579376 1.255636363 1 13.16906114 -5.329102619 6.569215117 1.372673388 1.060805439 0.27208539 0.181028105 0.2417872 19.27945682 0.045591639 0.096632014 4.69E-06 5.329102619 -0.311867949 SS(ph)PAPHSGPCPSR ddPTM_A459_MK2206_30min_R1 1 SSPAPHSGPCPSR 13 0 P85299;P85299-5;P85299-2;P85299-4;P85299-3 P85299 PRR5 Proline-rich protein 5 1 S(0.318)S(0.682)PAPHSGPCPSR 91.616 0.012932 4868900 1297.6 982.59 1180.6 1165.6 1170 1211.3 1525.8 1170.1 927.09 976.71 TRUE FALSE 1187.232306 918.6232124 1100.464161 1255.374714 1123.396422 1279.882759 1424.016666 1159.869939 1023.464323 1097.712209 1.081551518 0.836852506 1.002506989 1.14362827 1.023397949 1.165954746 1.297258657 1.056624797 0.932361247 1 10.10028415 -5.584461609 5.637660233 1.099251402 0.949746474 0.186797586 0.110061503 0.271686693 16.94236469 0.030830261 0.054692466 2.60E-06 5.584461609 -0.149504928 SS(ph)PAPHSGPCPSR ddPTM_A459_MK2206_30min_R2 1 SSPAPHSGPCPSR 13 0 P85299;P85299-5;P85299-2;P85299-4;P85299-3 P85299 PRR5 Proline-rich protein 5 1 S(0.186)S(0.814)PAPHSGPCPSR 68.481 0.044162 4882900 2114.1 3426.3 3122.6 3894.9 4170.5 4491.5 5236.2 3415.9 5385.6 3305.8 TRUE FALSE 2275.957121 3256.154924 3226.705925 3576.674211 4006.745215 4662.42718 4548.68065 3862.369859 5854.029753 3197.932017 0.711696531 1.018206424 1.008997661 1.118433473 1.252917571 1.457950687 1.42238191 1.207771097 1.830567292 1 11.64292355 -5.669426566 0.768663997 1.40919662 0.739008483 0.508483336 0.206909454 0.811784127 0.792243158 0.092947289 0.383416535 2.14E-06 5.669426566 -0.670188137 SS(ph)PATSLFVELDEEEVK ddPTM_A459_MK2206_30min_R1 1 SSPATSLFVELDEEEVK 17 0 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 S(0.329)S(0.671)PATSLFVELDEEEVK 315.47 1.04E-103 4055800 1690.4 1711.4 1290.6 1181.3 1280.7 1001.9 1689.7 1179.5 2115.8 2539.3 TRUE FALSE 1546.622603 1599.987549 1202.997668 1272.283931 1229.687007 1058.626712 1576.983196 1169.187756 2335.744981 2853.887655 0.541935349 0.560634385 0.421529441 0.445807293 0.430881365 0.370941971 0.552573677 0.409682474 0.818443213 1 11.47871283 -8.421596014 3.343597479 0.996152714 0.465978556 0.889270014 0.06381492 0.068142878 1.407738944 0.062947401 0.016758348 3.79E-09 8.421596014 -0.530174158 SS(ph)PELEDTATSSK ddPTM_A459_MK2206_30min_R2 2 SSPELEDTATSSK 13 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.165)S(0.835)PELEDT(0.001)ATSSK;S(0.203)S(0.789)PELEDT(0.007)ATSSK 108.66 0.0061998 12017400 63489 44675 37151 57214 36735 30138 84693 85093 32292 46247 TRUE FALSE 68349.76665 42456.50446 38389.5958 52539.43318 35292.59932 31284.92271 73572.70737 96214.94727 35100.69979 44737.96418 1.527779994 0.949003944 0.858098854 1.174381404 0.78887361 0.699292498 1.644525153 2.150633115 0.784584199 1 15.44921199 -7.271142009 24.93464728 1.490821721 0.989211303 0.168551066 0.408165746 946.261277 2431773.111 0.165951574 0.113474751 5.36E-08 7.271142009 -0.501610419 SS(ph)PELTR ddPTM_A459_MK2206_30min_R1 3 SSPELTR 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.237)S(0.763)PELTR;S(0.226)S(0.774)PELTR;S(0.113)S(0.887)PELTR 163.15 0.00036888 287150000 8429.9 8576.1 8073.1 6690.8 8250.9 7599 8995.2 8128.7 5409.7 7770.1 TRUE FALSE 7712.892738 8017.794331 7525.120465 7206.126575 7922.249181 8029.248813 8395.146621 8057.631633 5972.057674 8732.718649 0.883217821 0.918132675 0.861715666 0.825187077 0.90719162 0.919444349 0.961343994 0.922694519 0.683871531 1 13.09221514 -4.400319424 12.70100927 0.888166387 0.705490359 0.000359706 0.082276718 2402121.182 3406907.064 0.019976456 12315604.62 3.98E-05 4.400319424 -0.182676028 SS(ph)PELTR ddPTM_A459_MK2206_30min_R2 2 SSPELTR 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.077)S(0.923)PELTR;S(0.425)S(0.573)PELT(0.003)R 123.21 0.0074141 303170000 97115 100039 87880 106096 106641 122487 119870 120795 103061 121739 TRUE FALSE 104550.1991 95071.20873 90809.87534 97427.61742 102453.7385 127148.3286 104130.925 136583.3213 112025.0595 117766.6664 0.887774124 0.807284537 0.77109999 0.827293668 0.869972307 1.079663138 0.884213914 1.159779124 0.951245908 1 16.84557172 -6.620302443 4.921203263 1.016174428 0.821679369 0.609824907 0.073513552 0.136326063 5.496397057 0.023571343 0.023547159 2.40E-07 6.620302443 -0.194495059 SS(ph)PEQPRPSTSK ddPTM_A459_MK2206_30min_R2 2 SSPEQPRPSTSK 12 1 P29590-2;P29590;P29590-9;P29590-8;P29590-5;P29590-3;P29590-4;P29590-12;P29590-13;P29590-11;H3BVD2;H3BT57;H3BUJ5;H3BRN3 P29590-2 PML Protein PML 1 S(0.238)S(0.761)PEQPRPSTSK;S(0.226)S(0.774)PEQPRPSTSK 154.23 0.0021252 125025000 330588 428950 339974 368978 408495 383107 427417 355271 305232 395875 TRUE FALSE 355898.0715 407648.9668 351308.5635 338831.3171 392455.4338 397686.4053 371296.6345 401706.1395 331780.5276 382957.6312 0.929340591 1.064475372 0.917356216 0.884774945 1.024801184 1.038460584 0.969550165 1.048957135 0.866363536 1 18.54682526 -5.281391902 24.96395181 0.972047697 0.996908029 0.025668761 0.06693562 3769.760606 4716601.634 0.017584091 0.036678055 5.23E-06 5.281391902 0.024860332 SS(ph)PGAGPSDHHSASR ddPTM_A459_MK2206_30min_R1 1 SSPGAGPSDHHSASR 15 0 I3VM54;Q9Y2K7-3;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2 I3VM54 KDM2A Lysine-specific demethylase 2A 1 S(0.25)S(0.75)PGAGPSDHHSASR 106.31 0.0029883 393400 271.34 332.82 280.56 271.87 302.44 304.6 319.4 296.56 216.22 208.14 TRUE FALSE 248.2611081 311.1533575 261.5163689 292.8094745 290.3931744 321.8461888 298.0934088 293.9672072 238.6968428 233.9259546 1.061280731 1.330136103 1.117945075 1.251718626 1.241389289 1.375846427 1.27430669 1.256667768 1.020394865 1 7.86990813 -10.31250484 8.473165725 1 1.224619609 0.254767417 0.108757318 0 0 0.102612508 0.024887189 4.87E-11 10.31250484 0.224619609 SS(ph)PGAVAGLSNAPGTPR ddPTM_A459_MK2206_30min_R2 3 SSPGAVAGLSNAPGTPR 17 0 Q9BWG4-2;Q9BWG4;V9GYB2;U3KPY3 Q9BWG4-2;U3KPY3 SSBP4 Single-stranded DNA-binding protein 4 1 S(0.248)S(0.752)PGAVAGLSNAPGTPR;S(0.067)S(0.93)PGAVAGLS(0.003)NAPGTPR;S(0.242)S(0.754)PGAVAGLS(0.004)NAPGTPR 119.51 0.0015028 67391000 79483 88795 88138 97625 88057 76251 98943 78323 72475 101228 TRUE FALSE 85568.27959 84385.56942 91076.47693 89648.72521 84599.43973 79152.78524 85951.66525 88560.08502 78778.7445 97924.93865 0.873814993 0.861737271 0.930064171 0.915484109 0.863921294 0.808300585 0.87773009 0.904367021 0.804480918 1 16.5793887 -10.76609658 3.5903463 1.000235203 0.872979585 0.496081704 0.038932767 58344063.09 83974553.15 153081.9356 0.010094122 1.71E-11 10.76609658 -0.127255618 SS(ph)PGEIVEER ddPTM_A459_MK2206_30min_R2 2 SSPGEIVEER 10 0 H0YA93;Q86UW6-2;Q86UW6 H0YA93 N4BP2 NEDD4-binding protein 2 1 S(0.021)S(0.979)PGEIVEER;S(0.204)S(0.796)PGEIVEER 177.57 8.38E-05 13433800 34150 32331 35865 38619 32120 30528 37090 31218 29758 38142 TRUE FALSE 36764.55026 30725.48955 37060.7212 35463.70416 30858.80741 31689.76443 32220.03845 35298.29979 32346.29705 36897.42966 0.996398681 0.832727099 1.004425553 0.961142944 0.8363403 0.85886103 0.8732326 0.956660128 0.876654481 1 15.1712327 -4.223436405 6.96022011 0.909291795 11.57494098 0.145237224 0.061895019 12205.78979 2815.886519 0.015464701 2048793.411 5.98E-05 4.223436405 10.66564919 SS(ph)PGGQDEGGFMAQGK ddPTM_A459_MK2206_30min_R1 4 SSPGGQDEGGFMAQGK 16 0 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30 A0A1B0GTU4 PXN Paxillin 1 S(0.315)S(0.685)PGGQDEGGFMAQGK;S(0.295)S(0.705)PGGQDEGGFMAQGK;S(0.026)S(0.974)PGGQDEGGFMAQGK;S(0.267)S(0.733)PGGQDEGGFMAQGK 257.46 6.35E-39 25331900 7542.2 8950.2 7990.6 7245.1 7129.5 6141.6 7286.1 7167.2 7075.3 7101.6 TRUE FALSE 6900.696284 8367.540353 7448.220335 7803.118857 6845.516918 6489.332085 6800.057563 7104.537926 7810.802754 7981.399822 0.864597243 1.048380051 0.933197246 0.977662945 0.857683749 0.813056886 0.851988087 0.890136829 0.978625671 1 12.96242608 SS(ph)PGGQDEGGFMAQGK ddPTM_A459_MK2206_30min_R2 3 SSPGGQDEGGFMAQGK 16 0 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30 A0A1B0GTU4 PXN Paxillin 1 S(0.39)S(0.61)PGGQDEGGFMAQGK;S(0.152)S(0.848)PGGQDEGGFMAQGK;S(0.138)S(0.862)PGGQDEGGFMAQGK 281.49 1.17E-62 51672700 212081 214172 232886 230226 251626 171184 257250 208087 181495 231342 TRUE FALSE 228318.0844 203536.5299 240650.303 211415.7993 241745.8989 177698.5271 223472.766 235284.6854 197281.107 223793.3295 1.020218453 0.909484346 1.075323843 0.94469214 1.080219413 0.794029596 0.998567591 1.051348071 0.881532562 1 17.77180751 SS(ph)PGPDTLVVLEFNPASK ddPTM_A459_MK2206_30min_R1 1 SSPGPDTLVVLEFNPASK 18 0 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 S(0.183)S(0.817)PGPDTLVVLEFNPASK 310.46 1.77E-111 14318000 5685.6 5302.3 5289.9 4350.2 4813.4 4987.9 5907.8 4701.8 6139.2 6210.5 TRUE FALSE 5202.009864 4957.119306 4930.836327 4685.253158 4621.672085 5270.310588 5513.701441 4660.692658 6777.391809 6979.903627 0.74528391 0.710198818 0.706433296 0.671248975 0.662139813 0.755069249 0.78993948 0.667730231 0.970986445 1 12.7689914 -8.269729239 23.84522426 0.985493372 0.713972031 0.883663999 0.039474771 114.4442816 329183.6775 0.037558564 0.010400947 5.37E-09 8.269729239 -0.271521341 SS(ph)PGPDTLVVLEFNPASK ddPTM_A459_MK2206_30min_R2 1 SSPGPDTLVVLEFNPASK 18 0 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 S(0.033)S(0.967)PGPDTLVVLEFNPASK 199.61 1.16E-21 0 24604 23344 24608 30801 24822 22916 27156 27084 19798 31452 TRUE FALSE 26487.70116 22184.77091 25428.41844 28284.45977 23847.36356 23788.08444 23590.38458 30623.97179 21519.99425 30425.72382 0.870569302 0.729145214 0.835753936 0.929623234 0.783789523 0.781841201 0.775343414 1.006515802 0.707296049 1 14.89300396 -11.41338314 2.527341767 1.091703309 0.826518981 0.269235269 0.086713129 41193907.67 22287394 22502929.12 0.020636383 3.86E-12 11.41338314 -0.265184328 SS(ph)PIMR ddPTM_A459_MK2206_30min_R1 1 SSPIMR 6 0 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0;K7ENU7 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 S(0.019)S(0.981)PIMR 99.375 0.033329 4590700 2008.9 1740.4 1927.7 1725.8 1711.8 1770.6 2067.1 1610 797.43 1358.6 TRUE FALSE 1838.032506 1627.099644 1796.853095 1858.721415 1643.615381 1870.849842 1929.207531 1595.92394 880.3257021 1526.913625 1.2037567 1.065613416 1.176787649 1.217306195 1.076429835 1.225249295 1.263468672 1.045195952 0.576539293 1 10.57640274 -8.046008386 6.672662204 0.791222352 1.170220295 0.653106514 0.11164874 0.127956369 14.45037974 0.069492631 0.02657587 8.99E-09 8.046008386 0.378997943 SS(ph)PIMR ddPTM_A459_MK2206_30min_R2 2 SSPIMR 6 0 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0;K7ENU7 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 S(0.015)S(0.985)PIMR;S(0.019)S(0.981)PIMR 107.59 0.025761 51263000 156155 176344 174495 173298 169410 153870 181814 137158 145609 153213 TRUE FALSE 168110.3469 167587.0134 180312.5762 159138.999 162758.1122 159725.6307 157941.6034 155085.0215 158273.8076 148213.6724 1.134243179 1.130712239 1.216571814 1.073713353 1.098131566 1.077671365 1.065634505 1.046361102 1.067875892 1 17.17731901 -6.749495864 0.370409365 1.009579391 1.177881062 0.657286513 0.032696665 1.064003186 0.299856273 0.03701272 0.06848956 1.78E-07 6.749495864 0.168301671 SS(ph)PLPAK ddPTM_A459_MK2206_30min_R2 1 SSPLPAK 7 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 S(0.499)S(0.501)PLPAK 93.162 0.026071 88451000 375630 340310 344870 339010 266160 296710 470800 358530 261250 412130 TRUE FALSE 404388.5216 323410.7003 356367.7937 311311.7986 255709.2211 308001.507 408983.3945 405391.102 283973.0528 398682.2319 1.014312877 0.811199182 0.893864249 0.780851951 0.641386048 0.772548868 1.025838028 1.016827613 0.712279179 1 18.60487978 -7.248219862 24.73095424 0.94013851 0.812263224 0.18733026 0.121645279 1149.999501 2151411.567 0.048254038 0.037148628 5.65E-08 7.248219862 -0.127875286 SS(ph)PNPFITGLTR ddPTM_A459_MK2206_30min_R2 1 SSPNPFITGLTR 12 0 J3KQV8;O43426;A0A0D9SGJ6 J3KQV8 SYNJ1 Synaptojanin-1 1 S(0.241)S(0.759)PNPFITGLTR 84.734 0.032223 9773900 19050 22458 21822 28805 30425 26345 30120 21754 27259 34858 TRUE FALSE 20508.48265 21342.76838 22549.53459 26451.53936 29230.36163 27347.57744 26165.20782 24597.32249 29629.93855 33720.58631 0.608188792 0.632929931 0.668717156 0.784432961 0.866840255 0.811005395 0.775941663 0.729445279 0.878689898 1 15.041342 -3.045324816 0.123191302 1.04327546 1.57E-19 0.753054777 0.057217756 37.29040404 0.458041597 0.487617814 6.447534809 0.000900897 3.045324816 -1.04327546 SS(ph)PNVANQPPS(ph)PGGK ddPTM_A459_MK2206_30min_R2 3 SSPNVANQPPSPGGK 15 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 2 S(0.419)S(0.581)PNVANQPPS(1)PGGK;S(0.411)S(0.589)PNVANQPPS(1)PGGK;S(0.418)S(0.582)PNVANQPPS(1)PGGK 154.07 0.0045409 25002000 88831 89140 89217 93145 82852 72037 104662 84194 71960 101138 TRUE FALSE 95631.96966 84713.43722 92191.45025 85534.75554 79598.81418 74778.41851 90919.75368 95198.44488 78218.95073 97837.87534 0.977453459 0.865855242 0.942287942 0.874249929 0.813578728 0.764309509 0.929289944 0.973022406 0.799475157 1 16.57810545 -10.30417694 10.6971769 0.999988898 0.881798843 0.203405302 0.069951398 0 0 0.069605829 0.016881893 4.96E-11 10.30417694 -0.118190055 SS(ph)PPFWALPPSAPSER ddPTM_A459_MK2206_30min_R2 1 SSPPFWALPPSAPSER 16 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 S(0.002)S(0.998)PPFWALPPSAPSER 148.18 0.00029581 2451500 6889 8777.6 7534.8 8563.7 6672.6 7228.6 7670.3 6398.8 6724.2 7114.2 TRUE FALSE 7416.427137 8341.717148 7786.006471 7864.018316 6410.600197 7503.689438 6663.180396 7235.14513 7309.058761 6882.064237 1.07764573 1.212095218 1.131347544 1.142683074 0.931493804 1.0903254 0.968195031 1.051304504 1.062044542 1 12.74862564 -6.18795005 11.38485214 1.021015605 1.145472528 0.567248192 0.052816707 0.614059394 93.78208302 0.014697388 0.018980248 6.49E-07 6.18795005 0.124456923 SS(ph)PPLRTPDVLESSGPAVR ddPTM_A459_MK2206_30min_R2 1 SSPPLRTPDVLESSGPAVR 19 1 E9PJN1;O75676-2;O75676;A0A0A6YYC0 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 S(0.261)S(0.719)PPLRT(0.02)PDVLESSGPAVR 66.732 0.012052 10885000 11457 19855 23519 22914 22656 21342 19820 13467 21406 17713 TRUE FALSE 12334.15673 18869.02957 24303.11172 21041.8529 21766.4116 22154.18477 17217.61019 15227.18314 23267.85519 17135.02626 0.719821291 1.10119642 1.418329412 1.228002373 1.270287613 1.292918051 1.004819598 0.88865829 1.357911849 1 14.06466078 -7.278051265 24.08763719 1.053568956 1.186794613 0.059382403 0.205911904 1456.311081 2111675.144 0.088712114 0.060027561 5.27E-08 7.278051265 0.133225657 SS(ph)PQHSLSNPLPR ddPTM_A459_MK2206_30min_R1 1 SSPQHSLSNPLPR 13 0 Q86UE8-2;Q86UE8 Q86UE8-2 TLK2 Serine/threonine-protein kinase tousled-like 2 1 S(0.236)S(0.756)PQHS(0.006)LS(0.002)NPLPR 96.371 0.014238 10817000 1822.4 1769.2 1851.4 1672 1665.6 1480.3 1835.3 1569.2 1687.2 1189.4 TRUE FALSE 1667.39531 1654.024758 1725.732126 1800.77773 1599.255625 1564.113307 1712.870486 1555.48065 1862.590478 1336.751852 1.24734842 1.237346151 1.290989142 1.347129408 1.196374348 1.170085012 1.28136758 1.163627077 1.393370412 1 10.38451596 -6.300440973 24.64480146 1.211477638 1.278341116 0.133998255 0.097188711 1078.063828 681216.4075 0.028622296 0.032455218 5.01E-07 6.300440973 0.066863478 SS(ph)PQLDPLR ddPTM_A459_MK2206_30min_R1 1 SSPQLDPLR 9 0 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 S(0.225)S(0.775)PQLDPLR 126.66 0.0047511 3120100 3275.1 2815.7 3034.6 2081.6 3393.1 3700 3619.7 2724.7 3187.9 3578.8 TRUE FALSE 2996.535547 2632.397418 2828.619807 2241.925193 3257.945642 3909.490803 3378.236418 2700.878235 3519.293613 4022.168763 0.745004927 0.654472145 0.703257365 0.557392125 0.809997251 0.97198577 0.839904195 0.671497989 0.87497413 1 11.9737579 -6.447929768 7.305183643 0.853685705 0.668033172 0.514106263 0.094266771 0.253284346 21.65631385 0.029956845 0.033869227 3.57E-07 6.447929768 -0.185652532 SS(ph)PQLDPLR ddPTM_A459_MK2206_30min_R2 1 SSPQLDPLR 9 0 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 S(0.404)S(0.596)PQLDPLR 151.79 0.0011762 38600000 149410 127020 117460 138470 109340 112280 146250 112340 88635 143750 TRUE FALSE 160848.9445 120712.3715 121376.0578 127156.5581 105046.7622 116552.8941 127047.1993 127023.2237 96344.31208 139059.4493 1.156691942 0.868063063 0.872835743 0.914404298 0.755409019 0.838151558 0.913617881 0.913445468 0.69282823 1 17.08534226 -4.761085871 6.270829359 0.859213516 1.166245515 0.533048774 0.082375132 0.095464932 16.09681745 0.019587955 0.125530539 1.73E-05 4.761085871 0.307031999 SS(ph)PQLDPLRK ddPTM_A459_MK2206_30min_R1 3 SSPQLDPLRK 10 1 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 S(0.181)S(0.819)PQLDPLRK;S(0.245)S(0.755)PQLDPLRK;S(0.023)S(0.977)PQLDPLRK 78.529 0.026851 536460000 15244.8 16628.6 14606.1 10879.4 12753.7 14291.6 17800 13563.2 17443.8 20143 TRUE FALSE 13948.14971 15546.07512 13614.67863 11717.33327 12245.69312 15100.77804 16612.59448 13444.61837 19257.14543 22638.46691 0.616126073 0.686710597 0.601395787 0.517585105 0.540924135 0.667040666 0.733821532 0.593883783 0.85063823 1 14.46648864 -8.538884066 1.005104318 1.005213366 0.607060255 0.781952401 0.065709098 0.284028688 0.630080801 0.066467823 0.022062266 2.89E-09 8.538884066 -0.398153111 SS(ph)PQLDPLRK ddPTM_A459_MK2206_30min_R2 2 SSPQLDPLRK 10 1 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 1 S(0.217)S(0.783)PQLDPLRK;S(0.401)S(0.599)PQLDPLRK 108.35 0.013421 1265740000 601205 450176 514592 506348 417933 358970 498231 446882 342437 547024 TRUE FALSE 647233.717 427820.9145 531748.2404 464977.7487 401522.8505 372630.8549 432812.6712 505291.0118 372221.5513 529174.6517 1.223100379 0.808468269 1.004863401 0.878684849 0.75877189 0.704173667 0.817901367 0.954866243 0.703400191 1 19.01338443 -2.573596053 1.39644855 0.836025344 200 0.499333237 0.109341539 639.6537552 3.129740992 0.030964114 406183.3826 0.00266934 2.573596053 199.1639747 SS(ph)PRPGQPPK ddPTM_A459_MK2206_30min_R1 1 SSPRPGQPPK 10 1 P57739 P57739 CLDN2 Claudin-2 1 S(0.046)S(0.954)PRPGQPPK 116.55 0.029914 10511000 2382.1 2403 1830.1 1947.1 2161.5 1627.4 2761.7 2537 1570.6 2746.7 TRUE FALSE 2179.489886 2246.564263 1705.877911 2097.065979 2075.402878 1719.541982 2577.472032 2514.819276 1733.86949 3086.981933 0.706026123 0.727754264 0.552603789 0.679325641 0.672308074 0.557030141 0.834948856 0.81465306 0.561671409 1 11.59198132 -7.273679814 24.96819655 0.787372755 0.650778901 0.303417687 0.113067335 1083.851813 2210846.109 0.045548529 0.030958991 5.33E-08 7.273679814 -0.136593854 SS(ph)PRPGQPPK ddPTM_A459_MK2206_30min_R2 1 SSPRPGQPPK 10 1 P57739 P57739 CLDN2 Claudin-2 1 S(0.167)S(0.833)PRPGQPPK 110.08 0.045949 6783000 25605 19471 20844 20039 14706 18573 29820 14552 24645 22294 TRUE FALSE 27565.33849 18504.09845 21538.92856 18401.7496 14128.56855 19279.80853 25904.59818 16453.99636 26788.57755 21566.54861 1.278152522 0.857999988 0.998719311 0.853254266 0.655114956 0.893968195 1.20114714 0.762940639 1.242135589 1 14.39650769 SS(ph)PSHTTNGCQGEK ddPTM_A459_MK2206_30min_R2 1 SSPSHTTNGCQGEK 14 0 Q8N8R5 Q8N8R5 C2orf69 UPF0565 protein C2orf69 1 S(0.311)S(0.688)PS(0.001)HTTNGCQGEK 120.29 0.0020885 993750 801.21 1141.8 2275 1137.9 2218.5 2636.6 2038.9 2020.6 2946.7 1118.7 TRUE FALSE 862.5512536 1085.099872 2350.847365 1044.92993 2131.390543 2736.937661 1771.189981 2284.699358 3202.99864 1082.196911 0.797037254 1.002682471 2.172291698 0.965563586 1.969503444 2.529056989 1.636661465 2.11116788 2.95971889 1 10.07974731 -4.840168221 0.63142299 2.0868843 1.48E-11 0.311521225 0.590923519 3.827644108 1.215144418 0.282611627 5.749907147 1.44E-05 4.840168221 -2.0868843 SS(ph)PSKCPSLDDR ddPTM_A459_MK2206_30min_R1 2 SSPSKCPSLDDR 12 1 P38398-8;P38398-4;P38398;P38398-7;H0Y8B8;B7ZA85;E7EUM2;A0A2R8Y7V5;P38398-6;P38398-5;P38398-3 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 S(0.229)S(0.771)PSKCPSLDDR;S(0.228)S(0.752)PS(0.02)KCPSLDDR 124.48 0.014433 11545400 3775.3 2887.6 3349.4 2994.5 4596.5 4662 4597.2 3707.5 2494.3 2225.2 TRUE FALSE 3454.19091 2699.616715 3122.05206 3225.136909 4413.411672 4925.958411 4290.529176 3675.085718 2753.591411 2500.874575 1.381193181 1.079469055 1.248384102 1.289603621 1.764747307 1.969694306 1.715611498 1.469520205 1.101051383 1 11.28821699 -3.034873947 12.72061816 1.433190392 1.191380153 0 0.309743641 0 0 0.077464228 0 0.000922839 3.034873947 -0.241810239 SS(ph)PSSSSTQPQEESR ddPTM_A459_MK2206_30min_R2 1 SSPSSSSTQPQEESR 15 0 Q4G0A6 Q4G0A6 FAM188B Protein FAM188B 1 S(0.02)S(0.98)PSSSSTQPQEESR 146.27 0.0003678 0 1144.5 1316.6 1861.1 2959.7 1981.8 1125.6 3027.7 1129 1078.8 1255.6 TRUE FALSE 1232.1238 1251.219559 1923.148145 2717.883042 1903.984574 1168.435497 2630.159353 1276.564176 1172.632074 1214.629875 1.01440268 1.030124143 1.583320306 2.237622422 1.567543013 0.96196835 2.165399854 1.050990267 0.965423376 1 10.24630104 -7.964590565 24.99655078 0.991207899 1.509932705 0.234550162 0.417689781 256.3201451 180943.633 0.239609723 0.115104151 1.08E-08 7.964590565 0.518724806 SS(ph)PSVLIHSLGK ddPTM_A459_MK2206_30min_R2 1 SSPSVLIHSLGK 12 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 S(0.212)S(0.759)PS(0.03)VLIHSLGK 114.21 0.0037259 31896000 107580 136300 129930 189840 125380 176700 155160 120300 135560 129760 TRUE FALSE 115816.4075 129531.5402 134261.8014 174329.4647 120456.9512 183424.4423 134787.3056 136023.6231 147350.7638 125525.9418 0.922649182 1.031910522 1.069594057 1.388792326 0.959617984 1.46124729 1.073780476 1.083629575 1.173867024 1 16.93762602 -5.228464773 2.396701032 1.168077463 0.94787256 0.19195901 0.151569325 0.482934726 5.189784557 0.039482587 0.144205817 5.91E-06 5.228464773 -0.220204903 SS(ph)PTPESR ddPTM_A459_MK2206_30min_R2 1 SSPTPESR 8 0 K7EQ92;Q8NCA9 K7EQ92 ZNF784 Zinc finger protein 784 1 S(0.024)S(0.975)PT(0.001)PESR 112.11 0.011314 9086800 16239 14113 13747 18073 18200 13824 17333 28243 22356 21798 TRUE FALSE 17482.27033 13412.16894 14205.31812 16596.37809 17485.37655 14350.08201 15057.15628 31934.45707 24300.48447 21086.73305 0.829064905 0.636047742 0.673661401 0.787053075 0.829212212 0.680526565 0.714058278 1.514433602 1.152406322 1 14.36404798 -7.743503902 24.99855805 1.250064938 0.732898868 0.733944197 0.133941974 102.2132373 142465.7008 0.059869806 0.034474032 1.81E-08 7.743503902 -0.51716607 SS(ph)PTQETQAPFIAK ddPTM_A459_MK2206_30min_R2 1 SSPTQETQAPFIAK 14 0 O15231-5 O15231-5 ZNF185 Zinc finger protein 185 1 S(0.228)S(0.763)PT(0.008)QETQAPFIAK 158.65 0.00030415 10268000 45566 59029 49308 57696 49577 50842 57520 40990 42270 51638 TRUE FALSE 49054.56799 56097.7057 50951.90411 52982.05224 47630.35788 52776.82794 49967.55491 46347.53374 45946.56819 49953.05629 0.982013347 1.123008478 1.01999573 1.060636849 0.953502376 1.056528506 1.000290245 0.927821783 0.919794936 1 15.60828533 -7.588462419 4.173979349 0.943590485 1.033653212 0.378530385 0.047523736 0.210306084 7.33069548 0.023048703 0.012879275 2.58E-08 7.588462419 0.090062728 SS(ph)PVCSTAPVETEPK ddPTM_A459_MK2206_30min_R1 2 SSPVCSTAPVETEPK 15 0 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 S(0.03)S(0.97)PVCSTAPVETEPK;S(0.227)S(0.773)PVCSTAPVETEPK 363.83 1.91E-189 15019200 3635.7 4315.5 3915.8 2877.9 2849.2 2925.1 3627.3 3535 4187.9 4317 TRUE FALSE 3326.464623 4034.560166 3650.006406 3099.556357 2735.710331 3090.716634 3385.329435 3504.093868 4623.247192 4851.822552 0.685611353 0.83155559 0.75229594 0.638843718 0.563852099 0.637021779 0.697743868 0.722222182 0.952888763 1 12.24431107 -8.274319478 2.98081326 1.000509246 0.686844071 0.745279278 0.067279795 0.145748118 2.442079718 0.071232407 0.020308435 5.32E-09 8.274319478 -0.313665175 SS(ph)PVCSTAPVETEPK ddPTM_A459_MK2206_30min_R2 2 SSPVCSTAPVETEPK 15 0 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 S(0.228)S(0.772)PVCSTAPVETEPK;S(0.216)S(0.784)PVCSTAPVETEPK 297.45 1.99E-80 29361700 71628 53629 62570 55981 46736 41320 62604 46040 39634 61025 TRUE FALSE 77111.89475 50965.86184 64656.05257 51407.17323 44900.90981 42892.46155 54384.0196 52057.58608 43081.29368 59033.75925 1.306233852 0.863334175 1.095238613 0.870809752 0.760597163 0.726575134 0.921235921 0.881827394 0.729773849 1 15.84925259 -1.522878916 0.802359643 0.84032202 109.6874532 0.560938823 0.113264096 377.5488834 1.30024144 0.040036053 74712.76214 0.029999988 1.522878916 108.8471312 SS(ph)PVEFECINEK ddPTM_A459_MK2206_30min_R1 1 SSPVEFECINEK 12 0 O75131;H0YB26 O75131 CPNE3 Copine-3 1 S(0.126)S(0.874)PVEFECINEK 185.57 0.00010483 14275000 4004.6 4636.3 4325.6 3401.7 4078.7 3462.7 4197.3 4186 3850.7 4303.7 TRUE FALSE 3663.987741 4334.476027 4031.990324 3663.699523 3916.236742 3658.755082 3917.305775 4149.402243 4250.994045 4836.874847 0.75751138 0.896131524 0.833594098 0.757451793 0.809662616 0.756429554 0.809883633 0.857868432 0.878872036 1 12.23985949 -8.592036107 1.172108738 0.998483409 0.804826435 0.680078359 0.041127186 0.347365409 1.028632463 0.040578041 0.012705601 2.56E-09 8.592036107 -0.193656974 SS(ph)PVESLK ddPTM_A459_MK2206_30min_R1 1 SSPVESLK 8 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2;B1AKL5 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.111)S(0.889)PVESLK 96.331 0.021164 7517900 2637.7 3116.6 2756.7 2144.7 2026.3 2201.2 2461.6 2368.9 3897.9 4534.1 TRUE FALSE 2413.349764 2913.708774 2569.582885 2309.885166 1945.58818 2325.830042 2297.391155 2348.188957 4303.100654 5095.818539 0.473594133 0.571784248 0.504253216 0.45329031 0.381800915 0.456419322 0.450838494 0.46080702 0.844437576 1 12.31509819 -8.375974593 3.146075963 0.994082872 0.467665658 0.93893806 0.046940135 0.058101801 1.044764554 0.050533113 0.013634573 4.21E-09 8.375974593 -0.526417214 down SS(ph)PVGGGPR ddPTM_A459_MK2206_30min_R1 2 SSPVGGGPR 9 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.224)S(0.776)PVGGGPR;S(0.224)S(0.776)PVGGGPR 131.12 0.0036806 17759400 6129.1 6012.5 5329.1 5163.5 4910.8 4749.5 7235.5 6864 1396.81 4827.7 TRUE FALSE 5607.78786 5621.085157 4967.37554 5561.193665 4715.192437 5018.412586 6752.832997 6803.988772 1542.013398 5425.791923 1.033542742 1.035993499 0.915511617 1.024955203 0.869033038 0.924917995 1.244580163 1.254008423 0.284200614 1 12.40561801 -8.248882681 24.99851504 0.642100244 1.030753979 0.38330951 0.200612383 679.7344629 1353256.72 0.133455702 0.04968345 5.64E-09 8.248882681 0.388653736 SS(ph)PVGGGPR ddPTM_A459_MK2206_30min_R2 3 SSPVGGGPR 9 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.206)S(0.794)PVGGGPR;S(0.208)S(0.792)PVGGGPR;S(0.224)S(0.776)PVGGGPR 131.52 0.0035843 55643300 74891 90054 82601 88150 100900 86448 104223 82266 94920 92744 TRUE FALSE 80624.71254 85582.04931 85354.87611 80947.86302 96938.15902 89737.83922 90538.39491 93018.44866 103175.97 89717.77088 0.898648191 0.953902983 0.951370897 0.902250047 1.080478907 1.000223683 1.009146728 1.036789565 1.150005947 1 16.45310616 -6.258785165 24.9911891 1.043804724 0.930270728 0.625596498 0.045256042 168.1879978 1583599.905 0.013751329 0.016946192 5.51E-07 6.258785165 -0.113533996 SS(ph)PVLQHK ddPTM_A459_MK2206_30min_R1 2 SSPVLQHK 8 0 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;H0Y470;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.225)S(0.775)PVLQHK;S(0.203)S(0.797)PVLQHK 147.73 0.0011029 20452600 20316.2 17531 14745.6 18943.9 10217 12167.7 24314 33582 0 15490.2 TRUE FALSE 18588.20051 16389.72871 13744.70976 20402.96246 9810.035255 12856.62466 22692.05742 33288.39611 0 17409.24292 1.06772021 0.941438338 0.78950646 1.171961501 0.563495799 0.738494185 1.303448836 1.912110496 0 1 14.08756585 -7.256478014 24.67529303 1.129899036 0.876556897 0.022541383 0.467780203 1096.136994 5451641.819 0.177317283 0.132890324 5.54E-08 7.256478014 -0.253342139 SS(ph)PVLQHK ddPTM_A459_MK2206_30min_R2 2 SSPVLQHK 8 0 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;H0Y470;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.204)S(0.796)PVLQHK;S(0.203)S(0.797)PVLQHK 126.39 0.0032074 127126000 185141 204923 179427 218847 226420 173491 212856 269827 262025 259741 TRUE FALSE 199315.5373 194746.8218 185409.0066 200966.5 217529.6131 180093.3216 184907.7515 305094.3154 284815.4609 251265.6724 0.79324619 0.775063382 0.737900266 0.799816776 0.865735502 0.716744631 0.735905346 1.214229992 1.133523167 1 17.93885406 -7.757105472 24.99999621 1.130407469 0.775711386 0.860371551 0.062870264 34.05130887 196427.408 0.030331917 0.016724571 1.75E-08 7.757105472 -0.354696083 SS(ph)PVNRPSSATNK ddPTM_A459_MK2206_30min_R2 2 SSPVNRPSSATNK 13 1 Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;Q96L91-4;A0A0A0MR72;A0A0A0MR80 Q96L91-3 EP400 E1A-binding protein p400 1 S(0.197)S(0.803)PVNRPSSATNK;S(0.222)S(0.778)PVNRPSSATNK 115.06 0.019352 21476500 45212.6 43798.1 47220.1 50378.3 49405 42716.5 60601 39542.3 39728.8 49106.2 TRUE FALSE 48674.11142 41623.15004 48794.39457 46262.23174 47465.11146 44342.10634 52644.01591 44710.61438 43184.33921 47503.86872 1.024634682 0.876205479 1.027166753 0.973862403 0.999184124 0.933442002 1.108204812 0.941199435 0.909069943 1 15.53575739 -5.319018369 24.99987756 0.986867159 0.950417113 0.050906193 0.062328179 779.4235283 338411.2485 0.015872477 0.033041216 4.80E-06 5.319018369 -0.036450046 SS(ph)PVTVNQTDKEK ddPTM_A459_MK2206_30min_R1 1 SSPVTVNQTDKEK 13 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8 Q8IVL0-3 NAV3 Neuron navigator 3 1 S(0.227)S(0.77)PVT(0.003)VNQTDKEK 70.784 0.032906 9345800 2041.3 2824.3 2940.2 2408.8 2182.1 1866.9 2080.6 2659.3 2673.9 2291 TRUE FALSE 1867.676716 2640.437557 2740.627416 2594.326193 2095.182336 1972.602265 1941.80697 2636.05002 2951.861474 2574.826376 0.725360255 1.025481788 1.064393095 1.007573255 0.81371791 0.766110788 0.754150644 1.023777776 1.14643127 1 11.33025944 -7.982155988 22.31456129 1.07717864 0.890198718 0.322657966 0.118364846 83.79880374 104792.8145 0.071246759 0.034205544 1.04E-08 7.982155988 -0.186979922 SS(ph)PVVNDGVVR ddPTM_A459_MK2206_30min_R1 1 SSPVVNDGVVR 11 0 H0YAM1;H0Y8R1;F5H5I6;H0YAK1;Q12849-5;Q12849 H0YAM1 GRSF1 G-rich sequence factor 1 1 S(0.226)S(0.774)PVVNDGVVR 127.52 0.0029518 6659300 2137.9 2482.3 2264.6 2157.3 2574 1971.1 2349.5 2395.7 1773.4 1767 TRUE FALSE 1956.060378 2320.701819 2110.885262 2323.45562 2471.472129 2082.701979 2192.769142 2374.754647 1957.751276 1985.9093 0.984969645 1.168583993 1.062931354 1.169970663 1.244504031 1.048739728 1.104163791 1.195802168 0.985821093 1 10.95558402 -8.280231332 24.58853178 0.992910483 1.124596322 0.335917362 0.07280954 854.4478792 1117998.52 0.068073093 0.017706774 5.25E-09 8.280231332 0.131685839 SS(ph)PVVNDGVVR ddPTM_A459_MK2206_30min_R2 2 SSPVVNDGVVR 11 0 H0YAM1;H0Y8R1;F5H5I6;H0YAK1;Q12849-5;Q12849 H0YAM1 GRSF1 G-rich sequence factor 1 1 S(0.142)S(0.858)PVVNDGVVR;S(0.394)S(0.606)PVVNDGVVR 122.46 0.0041455 11731400 51786 49371 53359 75690 54139 87748 59702 38205 83072 48944 TRUE FALSE 55750.77598 46919.30793 55137.96243 69505.88488 52013.23083 91087.31163 51863.05569 43198.52468 90297.4524 47346.96129 1.177494278 0.99096767 1.164551239 1.468011526 1.098554784 1.923825926 1.095382983 0.912382199 1.907143562 1 15.53098422 -5.577867173 6.397742155 1.342855646 1.082267208 0.095693435 0.333607813 0.445950323 38.34372703 0.088113253 0.155043453 2.64E-06 5.577867173 -0.260588438 SS(ph)SLGSNR ddPTM_A459_MK2206_30min_R2 1 SSSLGSNR 8 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.151)S(0.573)S(0.276)LGS(0.001)NR 83.883 0.041112 0 50733 52456 65929 72597 79603 69778 81203 102800 88172 76706 TRUE FALSE 54617.15749 49851.11132 68127.03995 66665.59287 76477.38625 72433.45069 70540.94856 116236.313 95841.04118 74203.0895 0.736049642 0.671819889 0.918115949 0.898420717 1.030649623 0.976151413 0.950647056 1.566461905 1.291604458 1 16.17919164 -6.601994873 0.668056629 1.27485599 0.722394818 0.536161771 0.167392055 0.588001683 0.582822532 0.125953656 0.156803046 2.50E-07 6.601994873 -0.552461172 SS(ph)SLIQLTSQNSSPNQQR ddPTM_A459_MK2206_30min_R2 1 SSSLIQLTSQNSSPNQQR 18 0 H7C419;O95639 H7C419 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 1 S(0.011)S(0.709)S(0.28)LIQLTSQNSSPNQQR 256.08 3.30E-34 5442000 11019 11735 9276.5 12931 10887 11062 12804 11080 10031 12848 TRUE FALSE 11862.62311 11152.25696 9585.77388 11874.49594 10459.52168 11482.97216 11122.81942 12528.19404 10903.47825 12428.77081 0.954448617 0.897293637 0.77125679 0.955403886 0.841557209 0.923902479 0.894925137 1.007999442 0.87727728 1 13.601396 -7.632250277 8.828198205 0.956817146 0.88816223 0.218745234 0.060770003 0.411019338 30.65066689 0.027717512 0.01595038 2.33E-08 7.632250277 -0.068654916 SS(ph)SPELVTHLK ddPTM_A459_MK2206_30min_R1 1 SSSPELVTHLK 11 0 E9PNR6;H0YE29;Q07960 E9PNR6 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.038)S(0.588)S(0.374)PELVTHLK 149.69 0.00041455 69297000 11703 11238 11831 9180.3 11086 9299.7 11036 10134 9183.6 8413.2 TRUE FALSE 10707.5984 10506.40416 11027.94468 9887.368297 10644.42115 9826.240977 10299.80858 10045.39951 10138.26808 9455.490732 1.132421225 1.111143192 1.166300618 1.045674791 1.125739684 1.039210048 1.089293921 1.06238796 1.072209616 1 13.20693662 -1.522878745 0.053856556 0.848133665 1.546154097 0.563054069 0.031535603 298.8589581 1.214993274 3.5044487 16.91657138 0.03 1.522878745 0.698020432 SS(ph)SPEPACGTPR ddPTM_A459_MK2206_30min_R2 1 SSSPEPACGTPR 12 0 Q8TAB5 Q8TAB5 C1orf216 UPF0500 protein C1orf216 1 S(0.243)S(0.379)S(0.379)PEPACGTPR 105.36 0.0093557 4541900 8888.5 14810 14534 16344 17047 20538 14425 15100 12324 13266 TRUE FALSE 9569.010394 14074.55694 15018.55631 15008.64292 16377.64913 21319.58798 12530.98017 17073.62185 13395.91924 12833.13151 0.7456489 1.09673597 1.17029552 1.169523036 1.276200522 1.661292723 0.97645537 1.330433015 1.04385428 1 13.64758564 -4.37422879 1.267086738 1.231755817 4.88E-18 0.342854748 0.188521597 3.769387418 2.639501304 0.054512515 7.767066177 4.22E-05 4.37422879 -1.231755817 SS(ph)SPFLSK ddPTM_A459_MK2206_30min_R2 2 SSSPFLSK 8 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.017)S(0.918)S(0.065)PFLSK;S(0.072)S(0.464)S(0.464)PFLSK 142.98 0.0021804 22525000 327200 323500 265010 320270 286450 247210 313030 245390 242091 302700 TRUE FALSE 352250.6836 307435.4604 273845.3011 294102.9165 275202.5337 256617.7498 271928.785 277463.3155 263147.6376 292822.9238 1.202947771 1.049902297 0.935190789 1.004371218 0.939825783 0.87635813 0.928645823 0.947546428 0.898657913 1 18.15966897 -3.733417818 0.86736881 0.930494551 2.545177761 0.824118463 0.037564364 4.44393198 0.65745092 0.012746951 10.45350718 0.000184749 3.733417818 1.61468321 SS(ph)SPIPLTPSK ddPTM_A459_MK2206_30min_R2 1 SSSPIPLTPSK 11 0 Q8N5Y2;Q8N5Y2-3;Q8N5Y2-2;A0A3B3IT59;Q8N5Y2-6;Q8N5Y2-4;A0A3B3ITL5;A0A3B3ITF3;A0A3F2YNX2;A0A3B3IRN2 Q8N5Y2 MSL3 Male-specific lethal 3 homolog 1 S(0.001)S(0.819)S(0.18)PIPLTPSK 199.8 1.93E-05 34878000 266240 320250 303690 343260 333410 327910 417630 337530 343590 373120 TRUE FALSE 286623.5391 304346.8507 313814.873 315214.56 320318.6481 340388.8448 362794.6793 381646.3299 373474.8371 360945.125 0.794091731 0.843194241 0.869425437 0.873303276 0.887444174 0.943048739 1.005124198 1.057352776 1.034713621 1 18.46141999 -6.881567144 1.023193492 1.040350731 0.836976309 0.92443554 0.023420999 0.132234237 0.292126891 0.014568205 0.011735223 1.31E-07 6.881567144 -0.203374422 SS(ph)SPTQYGLTK ddPTM_A459_MK2206_30min_R1 1 SSSPTQYGLTK 11 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 S(0.203)S(0.398)S(0.398)PTQYGLTK 215.02 2.05E-05 187530000 8703 8682.1 8437.5 8197.6 8397.5 7245.6 8871.3 8299.8 7836.2 6464.9 TRUE FALSE 7962.764149 8116.893712 7864.786008 8828.980572 8063.009793 7655.83961 8279.511764 8227.235724 8650.801032 7265.82062 1.095920828 1.117133788 1.082436028 1.215138803 1.109717706 1.053678588 1.139515025 1.132320237 1.190615828 1 12.82691003 -10.82728599 5.299791493 0.999974218 1.125275608 0.408945518 0.045528595 1.40E-05 1.84E-06 0.044576567 0.010809182 1.49E-11 10.82728599 0.12530139 SS(ph)SPTSYWK ddPTM_A459_MK2206_30min_R2 1 SSSPTSYWK 9 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(0.04)S(0.48)S(0.48)PTSYWK 119.22 0.0069649 70996000 60134 54800 49208 54803 49434 41361 54881 44152 36439 53779 TRUE FALSE 64737.90528 52078.71169 50848.57016 50325.41959 47492.97277 42935.02184 47675.05878 49922.818 39608.39835 52024.19563 1.244380706 1.001047898 0.977402333 0.967346424 0.912901626 0.825289489 0.916401651 0.959607686 0.761345714 1 15.66689513 -1.522878853 0.716851853 0.89545015 48.76616378 0.701081014 0.066090793 166.1546515 0.823585228 0.024597642 12783.72388 0.029999993 1.522878853 47.87071363 SS(ph)SPVGLAK ddPTM_A459_MK2206_30min_R2 1 SSSPVGLAK 9 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.042)S(0.479)S(0.479)PVGLAK 110.53 0.010796 171020000 229540 261990 249490 272800 251500 197540 278940 223820 229550 253210 TRUE FALSE 247113.7589 248979.9576 257807.8721 250511.3674 241624.8463 205057.5231 242314.8429 253074.0425 249515.8441 244947.7784 1.008842621 1.016461383 1.052501369 1.022713368 0.98643412 0.83714792 0.989251033 1.033175496 1.018649141 1 17.90211468 -6.303490809 4.998138445 0.972149096 1.026660751 0.169478662 0.051366143 0.376271986 23.09949153 0.017618714 0.02051465 4.97E-07 6.303490809 0.054511655 SS(ph)SSASDGESEGKR ddPTM_A459_MK2206_30min_R2 1 SSSSASDGESEGKR 14 1 K7EJD2;A0A0A0MR03;Q9Y5B0;A0A0J9YWJ4;A0A0J9YWB6;Q9Y5B0-4 K7EJD2 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 S(0.313)S(0.407)S(0.039)S(0.019)AS(0.222)DGESEGKR 72.428 0.026638 5284000 13019 9128.9 7639.2 8385.7 11977 6535.8 10861 15635 13086 11636 TRUE FALSE 14015.74465 8675.572101 7893.887115 7700.561485 11506.7228 6784.524449 9434.937654 17678.54818 14224.19663 11256.31827 1.245144665 0.770729104 0.701284996 0.684110141 1.022245687 0.602730332 0.838190377 1.570544449 1.263663329 1 13.45844741 -7.738478806 23.82835013 1.312827669 0.822092246 0.460656023 0.216882786 101.048731 104867.9328 0.099309833 0.057275062 1.83E-08 7.738478806 -0.490735424 SS(ph)SVPHPFQVTLLR ddPTM_A459_MK2206_30min_R2 1 SSSVPHPFQVTLLR 14 0 Q5VV41;Q5VV41-2 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 S(0.133)S(0.665)S(0.201)VPHPFQVTLLR 122.1 0.0018241 9205900 16294 21768 18840 17993 24798 27698 23981 16638 28648 20123 TRUE FALSE 17541.48117 20687.03277 19468.1162 16522.91434 23824.30592 28752.0668 20832.26589 18812.64373 31139.75126 19466.38816 0.901116377 1.062705244 1.00008877 0.84879199 1.223868841 1.477010864 1.070165956 0.966416758 1.599667643 1 14.24869761 -6.279473227 23.35702738 1.226249243 0.964350104 0.317665253 0.193311969 441.0750347 571268.3413 0.059319431 0.067435604 5.25E-07 6.279473227 -0.26189914 SS(ph)TDSLPGPISR ddPTM_A459_MK2206_30min_R1 3 SSTDSLPGPISR 12 0 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 S(0.226)S(0.771)T(0.003)DSLPGPISR;S(0.032)S(0.935)T(0.032)DSLPGPISR;S(0.088)S(0.85)T(0.058)DS(0.004)LPGPISR 141.34 0.00099971 18839100 4315.3 4907.4 4635.4 3857.4 5567.3 4935.5 5606.5 4033.6 4508.3 3974.1 TRUE FALSE 3948.261074 4587.927368 4320.761963 4154.497616 5345.542652 5214.943745 5232.500615 3998.33466 4976.953918 4466.441511 0.883983606 1.027199697 0.967383532 0.930158294 1.19682361 1.167583575 1.171514415 0.895194676 1.114299584 1 12.12491015 -6.239366893 24.59995201 1.093527021 0.958625603 0.359508054 0.090505276 809.0976626 901744.7409 0.027869394 0.035949149 5.76E-07 6.239366893 -0.134901418 SS(ph)TDSLPGPISR ddPTM_A459_MK2206_30min_R2 1 SSTDSLPGPISR 12 0 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 S(0.216)S(0.748)T(0.033)DS(0.003)LPGPISR 77.279 0.046155 14013000 19438 22331 24668 22395 24795 28922 25979 20707 24632 20749 TRUE FALSE 20926.18823 21222.07501 25490.41881 20565.25686 23821.42372 30022.64698 22567.92609 23413.476 26774.44684 20071.96183 1.042558192 1.05729949 1.269951539 1.024576324 1.186800967 1.495750502 1.124350788 1.16647671 1.333922766 1 14.29289401 -5.24086602 20.21255886 1.207265815 1.049928029 0.159344495 0.137330109 124.5913794 122397.5653 0.034790884 0.09149491 5.74E-06 5.24086602 -0.157337786 SS(ph)TGPEPPAPTPLLAER ddPTM_A459_MK2206_30min_R1 1 SSTGPEPPAPTPLLAER 17 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.03)S(0.816)T(0.155)GPEPPAPTPLLAER 148.33 0.0003488 5123700 1518.3 1323 1272.9 1126.2 1226.8 1164.1 1585.3 1416.5 1711.1 2051 TRUE FALSE 1389.160612 1236.87246 1186.499095 1212.940119 1177.933958 1230.010336 1479.54753 1404.11569 1888.974968 2305.093364 0.602648306 0.53658237 0.5147293 0.526199996 0.511013557 0.53360543 0.641860131 0.609136147 0.819478724 1 11.17060947 -8.423263004 1.058096001 1.00287534 0.536661289 0.945382228 0.035470942 0.103996094 0.253594167 0.033706284 0.01112762 3.77E-09 8.423263004 -0.466214051 SS(ph)TPEEVK ddPTM_A459_MK2206_30min_R2 1 SSTPEEVK 8 0 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;E9PLJ3;E9PS23 P23528 CFL1 Cofilin-1 1 S(0.006)S(0.497)T(0.497)PEEVK 134.23 0.0028606 46894000 803390 862410 817310 763840 819970 545950 829520 755260 613990 828830 TRUE FALSE 864898.1561 819583.9735 844558.7075 701431.8286 787773.8578 566726.5098 720603.0276 853975.0752 667393.7404 801785.345 1.078715346 1.022198745 1.053347648 0.874837427 0.98252464 0.706830716 0.898748065 1.065091898 0.832384558 1 19.61285652 -5.755065802 24.99192103 0.905601965 1.04849844 0.327447201 0.093679035 181.8961005 713237.5563 0.025875123 0.043455565 1.76E-06 5.755065802 0.142896475 SS(ph)TPLPTISSSAENTR ddPTM_A459_MK2206_30min_R2 3 SSTPLPTISSSAENTR 16 0 P42166;G5E972;P42167;H0YJH7;P42167-2;P42167-3 P42166;G5E972 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 S(0.03)S(0.957)T(0.013)PLPTISSSAENTR;S(0.159)S(0.837)T(0.004)PLPTISSSAENTR;S(0.035)S(0.483)T(0.483)PLPTISSSAENTR 251.91 1.52E-29 381966500 250941 258753 248497.2 271950.8 227183.3 286183.8 335159 188614.5 206821 251321.7 TRUE FALSE 270153.2359 245903.7023 256781.9726 249731.5497 218262.9421 297074.725 291152.2207 213267.0628 224809.9167 243121.0935 1.111187976 1.011445361 1.056189609 1.027189974 0.897754033 1.221920816 1.19756051 0.877205098 0.924682896 1 17.89131554 -7.783567427 24.99996308 0.925707964 1.068624832 0.328458766 0.091731371 306.9487961 346781.4401 0.052956731 0.025471833 1.65E-08 7.783567427 0.142916868 SS(ph)TPLSEAK ddPTM_A459_MK2206_30min_R1 1 SSTPLSEAK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.001)S(0.499)T(0.499)PLSEAK 112.71 0.0095357 48370000 10634 9796.6 9769.9 8694.1 8555.7 6738.1 8580.4 8557.5 8443.1 7938.9 TRUE FALSE 9729.522459 9158.839559 9106.746409 9363.721088 8214.908352 7119.605399 8008.017172 8482.68268 9320.790459 8922.430868 1.090456469 1.026495996 1.020657548 1.049458519 0.920702942 0.797944585 0.897515183 0.950714307 1.04464698 1 13.1232211 -6.262218321 24.8985418 0.924037301 1.043454227 0.416480035 0.063792739 68.18124352 2179375.947 0.020766035 0.024941402 5.47E-07 6.262218321 0.119416926 SS(ph)TPLSEAK ddPTM_A459_MK2206_30min_R2 2 SSTPLSEAK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.005)S(0.498)T(0.498)PLSEAK;S(0.055)S(0.84)T(0.104)PLS(0.001)EAK 154.84 0.00085111 45949000 804370 710190 651760 660770 715970 539040 808420 570900 513240 778800 TRUE FALSE 865953.1857 674922.9973 673489.3531 606782.9773 687857.4203 559553.5449 702273.4829 645518.5902 557880.6875 753387.8198 1.149412245 0.895850689 0.893947759 0.805405876 0.913019035 0.742716474 0.932154017 0.856821113 0.740496027 1 19.52303318 -4.479881027 1.76313011 0.85253186 1.507169023 0.548440747 0.07777684 1.652255719 2.633199422 0.019708068 2.347000671 3.31E-05 4.479881027 0.654637164 SS(ph)TSGSDFDTKK ddPTM_A459_MK2206_30min_R1 1 SSTSGSDFDTKK 12 1 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 S(0.146)S(0.834)T(0.018)S(0.001)GS(0.001)DFDTKK 102.97 0.029577 0 882.34 985.57 1026.9 702.15 807.99 583.66 677.42 655.43 651.03 671.13 TRUE FALSE 807.2923496 921.4092139 957.1968891 756.2297147 775.8060474 616.7063248 632.2305478 649.6996446 718.7068982 754.2746512 1.070289646 1.221583163 1.26902964 1.002591978 1.02854583 0.817615074 0.838196732 0.861356859 0.95284509 1 9.558946132 -6.173599315 1.784476745 0.887925104 1.185766546 0.68277441 0.081179725 0.189515112 1.192642139 0.027863846 0.039563357 6.71E-07 6.173599315 0.297841442 SS(ph)TSSIDSNVSSK ddPTM_A459_MK2206_30min_R2 2 SSTSSIDSNVSSK 13 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8 Q8IVL0-3 NAV3 Neuron navigator 3 1 S(0.016)S(0.984)TSSIDSNVSSK;S(0.169)S(0.83)TS(0.001)SIDSNVSSK 232.37 2.77E-13 12987100 50922 53998 48203 49859 58036 42400 48526 36406 40448 46458 TRUE FALSE 54820.62747 51316.53784 49810.06396 45785.36021 55757.21503 44013.56171 42154.47791 41164.3892 43966.09393 44942.07926 1.219806212 1.141837198 1.108316855 1.018763728 1.240646093 0.979339684 0.937973467 0.91594314 0.978283485 1 15.45577925 -6.887068618 7.111121894 0.952282464 1.136042939 0.693369272 0.060906808 0.130682425 7.663517698 0.021592901 0.019048237 1.30E-07 6.887068618 0.183760475 SS(ph)VDLEESSTK ddPTM_A459_MK2206_30min_R1 2 SSVDLEESSTK 11 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 S(0.221)S(0.779)VDLEESSTK;S(0.205)S(0.795)VDLEESSTK 154.67 0.00053883 7361400 4291.3 4690.3 4765.2 4158.7 4009.1 4318.9 3911.3 4017.1 4422.3 4033.3 TRUE FALSE 3926.3024 4384.960617 4441.751501 4479.003795 3849.409058 4563.432386 3650.384314 3981.978918 4882.01391 4532.975654 0.866164458 0.967347048 0.979875437 0.988093503 0.849201353 1.006718927 0.805295372 0.878447012 1.076999808 1 12.1462427 -8.262536134 24.99974863 1.03849991 0.920665365 0.347363809 0.066159921 115.0861893 2623128.521 0.053686577 0.016828216 5.46E-09 8.262536134 -0.117834545 SS(ph)Y(ph)CS(ph)EPTLLKK ddPTM_A459_MK2206_30min_R1 1 SSYCSEPTLLKK 12 1 A0A494C109;Q96NX5-2;Q96NX5 A0A494C109 CAMK1G Calcium/calmodulin-dependent protein kinase type 1G 3 S(0.266)S(0.903)Y(0.852)CS(0.978)EPT(0.001)LLKK 62.162 0.041325 0 1682.9 1492.2 1367.4 1192 1356.5 1611.8 1665.1 1259.6 1193.8 1126.1 TRUE FALSE 1539.760518 1395.057509 1274.584698 1283.808047 1302.467733 1703.058723 1554.024217 1248.58745 1317.899782 1265.60977 1.216615544 1.102280926 1.007091387 1.014379059 1.029122692 1.345642839 1.227885763 0.986550104 1.041316063 1 10.30561693 -7.788186677 24.98833052 1.010449729 1.127983554 0.237908492 0.102371769 407.1647122 380382.6754 0.062648193 0.030108022 1.63E-08 7.788186677 0.117533825 SS(ph)YYVVSGNDPAAEEPSR ddPTM_A459_MK2206_30min_R2 1 SSYYVVSGNDPAAEEPSR 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.036)S(0.964)YYVVSGNDPAAEEPSR 160.09 2.15E-05 0 4250.6 7289.2 4707.1 9777.9 7226.3 9907.8 5691.9 5538.6 6874.5 4928.7 TRUE FALSE 4576.029204 6927.228927 4864.032365 8979.014292 6942.559153 10284.84827 4944.546693 6262.514037 7472.431584 4767.876923 0.959762443 1.45289592 1.02016735 1.88323114 1.456111235 2.157112786 1.03705418 1.313480641 1.567245066 1 12.21913128 -3.5606578 14.42115634 1.412812098 1.326349237 0 0.385163229 0 0 0.086164451 0 0.000275006 3.5606578 -0.086462861 SSAS(ph)APDVDDPEAFPALA ddPTM_A459_MK2206_30min_R1 1 SSASAPDVDDPEAFPALA 18 0 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 S(0.112)S(0.112)AS(0.776)APDVDDPEAFPALA 84.759 0.0078907 1433400 403.58 411.72 411.88 422.88 620.04 521.46 458.52 347.86 409.81 473.57 TRUE FALSE 369.2534017 384.9169532 383.9227332 455.4502909 595.3424938 550.9846146 427.9329674 344.8186967 452.411216 532.2394269 0.693773109 0.72320263 0.721334636 0.85572445 1.118561429 1.035219465 0.804023426 0.647863873 0.850014473 1 9.055931575 -5.809573545 4.437257618 0.899912473 0.712084543 0.334179146 0.123405373 0.28549143 11.85863493 0.040386513 0.063858394 1.55E-06 5.809573545 -0.18782793 SSAT(ph)MDPTTGLIY(ph)IGS(ph)HDQHAY(ph)ALDIY(ph)R ddPTM_A459_MK2206_30min_R1 1 SSATMDPTTGLIYIGSHDQHAYALDIYR 28 0 R4GNB1;Q4L235-2;Q4L235 R4GNB1 AASDH Acyl-CoA synthetase family member 4 5 S(0.005)S(0.012)AT(0.35)MDPT(0.313)T(0.348)GLIY(0.994)IGS(0.992)HDQHAY(0.988)ALDIY(0.997)R 45.735 0.013271 2838600 297.56 519.45 522.87 336.93 428.46 344.46 490.57 312.35 581.38 443.37 TRUE FALSE 272.2509595 485.6337106 487.3790412 362.880407 411.3935309 363.9630275 457.8449704 309.6191569 641.8165315 498.2980229 0.546361709 0.974584863 0.978087447 0.728239709 0.825597357 0.730412345 0.918817554 0.621353372 1.288017415 1 8.96086504 -8.265430813 24.98325741 1.144008712 0.804203411 0.468206517 0.150156174 309.1626186 1935075.006 0.121400862 0.035885502 5.43E-09 8.265430813 -0.3398053 SSATSGDIWPGLS(ph)AYDNSPR ddPTM_A459_MK2206_30min_R1 1 SSATSGDIWPGLSAYDNSPR 20 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 SSATSGDIWPGLS(0.741)AY(0.003)DNS(0.256)PR 174.68 2.73E-10 76761000 3258.9 2702.1 2661 2245.1 3007.6 3179.2 4398.2 3533.8 3751.1 4719.1 TRUE FALSE 2981.713442 2526.192799 2480.378734 2418.017991 2887.800923 3359.203557 4104.804103 3502.904359 4141.040268 5303.737735 0.562190966 0.476304245 0.467666174 0.455908288 0.544484111 0.633365322 0.773945528 0.660459573 0.780777722 1 12.37279372 -8.008644512 0.420302177 1.005369987 0.455979904 0.885437241 0.055943397 0.345309591 0.169665573 0.073223322 0.052506455 9.80E-09 8.008644512 -0.549390083 SSATSGDIWPGLSAYDNS(ph)PR ddPTM_A459_MK2206_30min_R1 6 SSATSGDIWPGLSAYDNSPR 20 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 SSATSGDIWPGLS(0.165)AYDNS(0.835)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLS(0.013)AY(0.008)DNS(0.979)PR;SSATSGDIWPGLS(0.006)AY(0.003)DNS(0.99)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLS(0.018)AYDNS(0.981)PR 197.05 1.54E-15 323832300 13421.79 13597.34 13606.94 10274.41 13046.99 14827.69 19324.69 14730.26 18819.33 20975.54 TRUE FALSE 12280.19628 12712.15069 12683.33882 11065.74684 12527.30076 15667.22099 18035.57519 14601.47489 20775.6667 23574.14825 0.52091792 0.539241145 0.538018964 0.469401767 0.531399931 0.664593301 0.765057341 0.619385046 0.881290237 1 14.52491803 -8.060964695 0.504117827 1.008119762 0.499167961 0.864540405 0.061415448 0.309304328 0.195883401 0.06739945 0.039812559 8.69E-09 8.060964695 -0.508951801 SSATSGDIWPGLSAYDNS(ph)PR ddPTM_A459_MK2206_30min_R2 7 SSATSGDIWPGLSAYDNSPR 20 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLS(0.002)AY(0.001)DNS(0.998)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLS(0.065)AY(0.397)DNS(0.537)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLSAYDNS(1)PR 271.58 4.56E-59 144314900 802321.1 612905.2 672503.4 702388.1 550463.2 587433.7 696011.7 595784 495051.4 793526.7 TRUE FALSE 863747.4203 582469.219 694924.3277 645000.7454 528849.2489 609788.9011 604624.5277 673655.0144 538110.0759 767633.9888 1.125207368 0.758785082 0.905280821 0.840245162 0.688934123 0.794374546 0.787646895 0.877573198 0.700998241 1 19.55005907 -4.755596522 24.99894892 0.811111523 1.125207875 0.514150261 0.089684829 147.0426638 629065.9944 0.021044565 0.184285917 1.76E-05 4.755596522 0.314096352 SSAWAEGGS(ph)PR ddPTM_A459_MK2206_30min_R1 4 SSAWAEGGSPR 11 0 Q8N9B5-2;Q8N9B5 Q8N9B5-2 JMY Junction-mediating and -regulatory protein 1 SSAWAEGGS(1)PR;SSAWAEGGS(1)PR;SSAWAEGGS(1)PR;SSAWAEGGS(1)PR 134.75 0.0015689 33420900 6479.6 6381.8 6056.6 5851.7 7062 6297.4 6691.2 6192.9 6334.2 6023.6 TRUE FALSE 5928.475994 5966.34366 5645.494867 6302.398948 6780.705586 6653.953346 6244.842257 6138.756128 6992.662757 6769.849044 0.875717605 0.881311182 0.833917393 0.930951179 1.001603661 0.982880608 0.922449262 0.906778879 1.032912656 1 12.72490795 -5.946138709 5.16322926 0.967629498 0.866294076 0.636233148 0.037224029 0.136465628 7.757091826 0.010925114 0.016299918 1.13E-06 5.946138709 -0.101335422 SSAWAEGGS(ph)PR ddPTM_A459_MK2206_30min_R2 2 SSAWAEGGSPR 11 0 Q8N9B5-2;Q8N9B5 Q8N9B5-2 JMY Junction-mediating and -regulatory protein 1 SSAWAEGGS(1)PR;SSAWAEGGS(1)PR 142.76 0.00089481 18002000 46351 70562 54003 72818 61102 63520 69452 61650 60675 68601 TRUE FALSE 49899.6682 67057.99369 55803.43307 66868.53647 58702.82847 65937.29811 60332.86897 69707.86668 65952.40182 66362.55499 0.751925061 1.010479384 0.840887351 1.007624503 0.884577583 0.993591915 0.909140237 1.050409628 0.993819509 1 16.01808181 -2.898325624 0.440685087 0.987534087 2.83E-123 0.389227916 0.069961701 28.15900717 1.11663466 0.043289172 20.67376501 0.001263788 2.898325624 -0.987534087 SSCS(ph)TPLSQANR ddPTM_A459_MK2206_30min_R1 1 SSCSTPLSQANR 12 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 SSCS(0.851)T(0.148)PLSQANR 126.34 0.0027482 4181300 2895.1 3173.2 3032 2933.5 3589.7 2947 3063.8 2601.7 2637.9 2522.7 TRUE FALSE 2648.856542 2966.624103 2826.196288 3159.438678 3446.714648 3113.856593 2859.419492 2578.953611 2912.119145 2835.231121 0.934264767 1.046342953 0.99681337 1.114349604 1.215673256 1.098272578 1.008531358 0.909609658 1.027118785 1 11.46925063 -7.456346668 5.287311228 0.973003982 1.071600445 0.224614433 0.074918729 0.323657214 17.56043919 0.035631002 0.023221642 3.50E-08 7.456346668 0.098596464 SSCS(ph)TPLSQANR ddPTM_A459_MK2206_30min_R2 1 SSCSTPLSQANR 12 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.006)S(0.006)CS(0.831)T(0.156)PLSQANR 179.59 0.00010389 21783000 71615 77848 80162 93890 74165 79772 83208 55332 72114 76696 TRUE FALSE 77097.89946 73982.18152 82834.56107 86218.88666 71252.90945 82807.77936 72282.68965 62564.08238 78386.34537 74193.4158 1.039147458 0.997152924 1.116467818 1.162082723 0.960367017 1.116106847 0.974246688 0.84325653 1.056513499 1 16.17900354 -7.40151159 6.265271991 0.952422881 1.063715952 0.280282745 0.074835236 0.284759196 13.41743369 0.031299485 0.020881107 3.97E-08 7.40151159 0.111293071 SSCSGLRT(ph)SSPT(ph)LAS(ph)TR ddPTM_A459_MK2206_30min_R2 1 SSCSGLRTSSPTLASTR 17 1 Q9UKQ9-2 Q9UKQ9-2 3 S(0.001)SCS(0.014)GLRT(0.622)S(0.156)S(0.208)PT(1)LAS(0.573)T(0.427)R 102.84 0.010624 0 5734.8 6210.9 7178 8885.7 7819.8 7383 8392.1 5972.3 4678.7 6974.9 TRUE FALSE 6173.860697 5902.475737 7417.310937 8159.709886 7512.755361 7663.965239 7290.207189 6752.900116 5085.644869 6747.309584 0.915010734 0.874789524 1.099299038 1.209327923 1.113444591 1.135854987 1.080461345 1.000828557 0.753729291 1 12.72009664 -8.040323518 6.836813392 0.87527534 1.064498345 0.309085433 0.108914222 0.287887739 37.96342462 0.078717319 0.03037584 9.11E-09 8.040323518 0.189223005 SSCST(ph)PLSQANR ddPTM_A459_MK2206_30min_R1 3 SSCSTPLSQANR 12 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 SSCS(0.034)T(0.966)PLSQANR;SSCS(0.007)T(0.993)PLSQANR;S(0.003)S(0.001)CS(0.009)T(0.986)PLSQANR 208.08 2.00E-05 50778700 12552.6 12460.1 11286.4 10230.5 14349 12684.1 14490.1 12180.3 10313.7 10284.6 TRUE FALSE 11484.93545 11648.94523 10520.31061 11018.45488 13777.44895 13402.26278 13523.49187 12073.80892 11385.84602 11558.73389 0.993615353 1.007804603 0.910161157 0.953257942 1.191951391 1.159492286 1.16998038 1.044561544 0.985042664 1 13.49669576 -6.238266055 24.70220008 1.101355952 0.965177332 0.431817173 0.070084775 663.7529023 707544.1579 0.022144979 0.028568906 5.78E-07 6.238266055 -0.136178621 SSCST(ph)PLSQANR ddPTM_A459_MK2206_30min_R2 2 SSCSTPLSQANR 12 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 SSCS(0.028)T(0.972)PLSQANR;S(0.001)S(0.001)CS(0.364)T(0.632)PLS(0.003)QANR 219.74 8.27E-08 19678100 113816 127128 123792 155340 125254 148003 131136 103677 129487 148896 TRUE FALSE 122529.8405 120815.0084 127919.1635 142648.2251 120335.8986 153635.3579 113917.6857 117227.9399 140749.5452 144037.5357 0.850679928 0.838774475 0.888096029 0.990354524 0.835448191 1.066634174 0.790888883 0.813870768 0.977172683 1 17.1360853 -14.52287875 0.333527846 2.102878795 0.889668187 0.129378776 0.084199035 821.629936 7.043776081 643.3103231 0.06968378 3.00E-15 14.52287875 -1.213210608 SSDEENGPPS(ph)SPDLDR ddPTM_A459_MK2206_30min_R1 1 SSDEENGPPSSPDLDR 16 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 SSDEENGPPS(0.5)S(0.5)PDLDR 103.01 0.0072693 0 1000.8 778.42 980.32 826.98 934 718.97 987.6 881.18 753.79 723.53 TRUE FALSE 915.6767046 727.7447165 913.7786097 890.6741429 896.7968022 759.6774601 921.719006 873.4759362 832.149168 813.1663588 1.126063191 0.894951825 1.123728988 1.095316024 1.10284543 0.934221457 1.133493775 1.074166346 1.023344312 1 9.667406721 -8.479674089 4.533681332 1.000236718 1.057778757 0.062629211 0.077618442 0.569557273 26.85877308 0.072434359 0.018904116 3.31E-09 8.479674089 0.05754204 SSDEENGPPSS(ph)PDLDR ddPTM_A459_MK2206_30min_R1 2 SSDEENGPPSSPDLDR 16 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 SSDEENGPPSS(1)PDLDR;SSDEENGPPS(0.019)S(0.981)PDLDR 348.26 4.48E-174 91875000 11472 11964.6 12687.5 12212.6 15545.1 14788.7 16595.5 16461.1 14770.8 13435.7 TRUE FALSE 10496.24616 11185.70237 11826.30785 13153.21657 14925.90575 15626.02341 15488.44448 16317.18234 16306.27752 15100.21595 0.695105699 0.740764397 0.783187995 0.871061488 0.988456443 1.034821188 1.025710131 1.080592648 1.079870485 1 13.88228156 -5.995960135 1.049851251 1.0566416 0.69984248 0.970680677 0.023578489 0.080481055 0.180194003 0.009501506 0.019920091 1.01E-06 5.995960135 -0.35679912 SSDEENGPPSS(ph)PDLDR ddPTM_A459_MK2206_30min_R2 2 SSDEENGPPSSPDLDR 16 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 SSDEENGPPS(0.025)S(0.975)PDLDR;SSDEENGPPS(0.002)S(0.998)PDLDR 347.33 5.35E-155 175616000 106469 139377 141342 165393 158246 185122 192482 166145 171446 183249 TRUE FALSE 114620.3485 132455.7409 146054.2717 151879.8628 152032.4669 192166.9474 167208.8822 187860.722 186358.0632 177269.6001 0.646587731 0.747199411 0.823910426 0.856773314 0.857634173 1.084037801 0.943246231 1.059745844 1.051269157 1 17.43558562 -5.563278981 0.533677767 1.046761158 0.567456958 0.858984182 0.051852383 0.694405592 0.269425418 0.034559358 0.189314666 2.73E-06 5.563278981 -0.4793042 SSDGRPDS(ph)GGTLR ddPTM_A459_MK2206_30min_R1 2 SSDGRPDSGGTLR 13 1 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 SSDGRPDS(0.772)GGT(0.228)LR;SSDGRPDS(0.914)GGT(0.086)LR 118.52 0.016174 11862100 5154.2 4851.7 4769.4 4491.1 5950.3 5015.3 4682.5 4897.4 3829.6 3642.4 TRUE FALSE 4715.808224 4535.853448 4445.666416 4837.0053 5713.286951 5299.261952 4370.138969 4854.582548 4227.700624 4093.648011 1.151981854 1.10802234 1.085991371 1.181587984 1.39564685 1.294508453 1.067541459 1.18588177 1.032746492 1 11.99917134 -8.268786172 1.476072202 0.995674155 1.192129969 0.336881151 0.093707023 0.515501402 2.1689525 0.098633518 0.030256734 5.39E-09 8.268786172 0.196455814 SSDGS(ph)LSHEEDLAK ddPTM_A459_MK2206_30min_R1 1 SSDGSLSHEEDLAK 14 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YEF9;E9PJZ7 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 SSDGS(0.999)LS(0.001)HEEDLAK 185.27 7.91E-05 3535200 685.52 734.89 893.5 668.42 830.58 675.94 714.18 619.24 525.82 579.76 TRUE FALSE 627.2129242 687.0485274 832.8517094 719.9018242 797.4962398 714.2111387 666.5383553 613.82605 580.4808707 651.5850458 0.96259564 1.054426482 1.278193407 1.104847063 1.223932693 1.096113459 1.022949129 0.942050549 0.890875066 1 9.347809683 -7.448461557 2.27475828 0.937171935 1.129677323 0.466048671 0.084822307 0.279010384 2.8360989 0.047809736 0.026958152 3.56E-08 7.448461557 0.192505387 SSDGS(ph)LSHEEDLAK ddPTM_A459_MK2206_30min_R2 3 SSDGSLSHEEDLAK 14 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YEF9;E9PJZ7 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 S(0.066)S(0.066)DGS(0.857)LS(0.011)HEEDLAK;S(0.001)S(0.001)DGS(0.998)LS(0.001)HEEDLAK;S(0.109)S(0.109)DGS(0.688)LS(0.093)HEEDLAK 119.88 0.0021479 16849400 68144 91263 88380 89088 103258 77245 95270 73136.4 79677.8 85157 TRUE FALSE 73361.15703 86731.01213 91326.54509 81809.22542 99203.57209 80184.6126 82760.93456 82695.57859 86608.03102 82378.33406 0.890539459 1.052837656 1.108623355 0.993091525 1.204243485 0.973370165 1.004644431 1.003851068 1.051344774 1 16.32997733 -10.31475814 14.94450882 0.999995371 1.034949983 0.012131925 0.079347959 0 0 0.075299303 0.018262763 4.84E-11 10.31475814 0.034954612 SSDGSLS(ph)HEEDLAK ddPTM_A459_MK2206_30min_R1 1 SSDGSLSHEEDLAK 14 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YEF9;E9PJZ7 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 SSDGS(0.229)LS(0.771)HEEDLAK 214.48 1.38E-39 0 1004.7 1079.9 1091.9 1142.7 947.38 845.95 855.78 1114.2 744.84 619.5 TRUE FALSE 919.2449891 1009.598314 1017.78487 1230.710952 909.6438485 893.8469579 798.6924777 1104.458667 822.2687834 696.248337 1.32028321 1.450054902 1.461813 1.76763216 1.306493388 1.283804801 1.147137358 1.586299899 1.180999278 1 9.443458166 -6.492042703 24.73942083 1.273247685 1.499083987 0.325267656 0.174663058 791.7349219 635200.764 0.053445866 0.060526833 3.22E-07 6.492042703 0.225836302 SSDITSDLGNVLTS(ph)TPNAK ddPTM_A459_MK2206_30min_R2 1 SSDITSDLGNVLTSTPNAK 19 0 Q5T8D3-4;Q5T8D3-2;B7Z2R7;Q5T8D3-3 Q5T8D3-4 ACBD5 Acyl-CoA-binding domain-containing protein 5 1 SSDITSDLGNVLT(0.001)S(0.91)T(0.088)PNAK 238.45 1.07E-29 4211000 43612 21119 22453 24258 23225 28894 42968 16546 23426 26814 TRUE FALSE 46950.96825 20070.26117 23201.57181 22276.0438 22313.0698 29993.58142 37326.24999 18708.61901 25463.55114 25939.06138 1.810048851 0.773746624 0.894464587 0.858783727 0.86021115 1.156309435 1.438997713 0.721252737 0.981668179 1 14.66283866 -4.753259556 24.99856865 0.968322551 1.8100504 0.624644523 0.196494549 215.5137589 658585.8229 0.051666389 0.566970645 1.76E-05 4.753259556 0.841727849 SSDITSDLGNVLTST(ph)PNAK ddPTM_A459_MK2206_30min_R2 1 SSDITSDLGNVLTSTPNAK 19 0 Q5T8D3-4;Q5T8D3-2;B7Z2R7;Q5T8D3-3 Q5T8D3-4 ACBD5 Acyl-CoA-binding domain-containing protein 5 1 SSDITSDLGNVLTS(0.083)T(0.917)PNAK 253.36 1.26E-37 3699500 75897 42124 32514 42227 37506 42224 79453 33166 41335 42540 TRUE FALSE 81707.73267 40032.18341 33598.00053 38776.91902 36033.32599 43830.86391 69020.72566 37500.91008 44930.24358 41151.92328 1.985514313 0.972790096 0.81643816 0.942286919 0.875617058 1.065098795 1.677217494 0.911279646 1.091813942 1 15.32867224 -4.758883903 24.99681147 1.042048845 1.985515559 0.608436254 0.227742141 50.67686512 495602.5746 0.060288239 0.399388255 1.74E-05 4.758883903 0.943466713 SSDPGPDIGVVEES(ph)PEKGDEISLR ddPTM_A459_MK2206_30min_R1 2 SSDPGPDIGVVEESPEKGDEISLR 24 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SSDPGPDIGVVEES(0.999)PEKGDEIS(0.001)LR;SSDPGPDIGVVEES(0.996)PEKGDEIS(0.004)LR 149.94 6.36E-10 17704300 4966.3 6661.9 6209.3 5440.4 4449.8 4594.8 4896.6 4771.7 5603.2 5951.4 TRUE FALSE 4543.890106 6228.209099 5787.830016 5859.420551 4272.555043 4854.953605 4569.956748 4729.98153 6185.672691 6688.704363 0.67933786 0.931153294 0.865314073 0.876017272 0.638771698 0.725843653 0.683234974 0.707159604 0.924793855 1 12.70751106 -8.438844612 4.374047914 0.998118159 0.76861972 0.434529282 0.092412456 0.209332731 6.788372673 0.096808277 0.025321546 3.64E-09 8.438844612 -0.229498439 SSDPGPDIGVVEES(ph)PEKGDEISLR ddPTM_A459_MK2206_30min_R2 2 SSDPGPDIGVVEESPEKGDEISLR 24 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SSDPGPDIGVVEES(0.995)PEKGDEIS(0.005)LR;SSDPGPDIGVVEES(0.982)PEKGDEIS(0.018)LR 96.181 5.80E-06 9324600 55713 42191 46459 43115 41581 32983 54513 42588 28229 57414 TRUE FALSE 59978.43012 40095.85629 48007.91987 39592.36658 39948.32101 34238.19118 47355.37762 48154.39783 30684.30739 55540.58588 1.079902726 0.721919938 0.864375467 0.71285468 0.719263587 0.616453547 0.852626541 0.867012781 0.552466397 1 15.76125478 -4.757152965 24.99196605 0.761047035 1.079903198 0.357286066 0.125460472 135.8812032 792153.5155 0.029519393 0.225030386 1.75E-05 4.757152965 0.318856164 SSDQPLTVPVS(ph)PK ddPTM_A459_MK2206_30min_R1 4 SSDQPLTVPVSPK 13 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK 222.42 7.74E-09 315753800 32325.1 37580 35566.7 32440.4 22924.1 19862.3 24184.6 26524.2 29400.1 26803.4 TRUE FALSE 29575.6805 35133.53517 33152.5315 34938.96523 22010.98455 20986.88626 22571.28946 26292.30172 32456.3456 30124.00755 0.981797673 1.166296852 1.100535227 1.159837886 0.730679161 0.696683077 0.749279107 0.872802255 1.077424561 1 14.87862609 -6.254828094 24.98414553 0.834968444 1.106588223 0.496592774 0.121162507 433.4448591 1637993.893 0.037865903 0.047720891 5.56E-07 6.254828094 0.271619779 SSDQPLTVPVS(ph)PK ddPTM_A459_MK2206_30min_R2 5 SSDQPLTVPVSPK 13 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLT(0.025)VPVS(0.975)PK 207.92 1.04E-05 506555000 926210 888790 846612 712270 840430 562939 994500 725947 603499 945420 TRUE FALSE 997121.3497 844653.981 874837.6215 654075.2626 807430.4954 584362.0381 863920.9554 820830.7654 655990.2521 914571.0228 1.090261253 0.923552092 0.95655515 0.715171645 0.882851605 0.638946592 0.944618771 0.897503578 0.717265511 1 19.80273568 -4.832951692 1.24613971 0.826838926 1.178857867 0.322205634 0.111220674 1.514840514 2.166034613 0.032428961 0.674617255 1.47E-05 4.832951692 0.352018941 SSDS(ph)EEAFETPESTTPVK ddPTM_A459_MK2206_30min_R1 1 SSDSEEAFETPESTTPVK 18 0 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 S(0.095)S(0.095)DS(0.809)EEAFETPESTTPVK 114.06 0.0011208 7170100 1521.4 1650.3 1731.1 1720.2 1908.2 1628.4 1695.8 1454.1 1509.8 1549.6 TRUE FALSE 1391.996941 1542.86517 1613.597755 1852.690102 1832.192353 1720.598601 1582.676276 1441.386957 1666.749113 1741.576147 0.799274234 0.885901643 0.926515764 1.063800802 1.052031148 0.98795485 0.908760882 0.827633612 0.957034877 1 10.76617784 -5.004858399 2.065704213 0.965476533 0.791317895 0.401399255 0.064996571 0.54275975 3.601479684 0.020511106 0.150548985 9.89E-06 5.004858399 -0.174158639 SSDTSGS(ph)PATPLK ddPTM_A459_MK2206_30min_R2 1 SSDTSGSPATPLK 13 0 Q7Z5R6 Q7Z5R6 APBB1IP Amyloid beta A4 precursor protein-binding family B member 1-interacting protein 1 SSDT(0.001)S(0.007)GS(0.991)PAT(0.001)PLK 126.09 0.0020632 6287300 28649 29421 33245 35840 32136 32029 37038 25190 32557 29126 TRUE FALSE 30842.38947 27959.99592 34353.37171 32911.75735 30874.17917 33247.88604 32174.86611 28482.41949 35388.74901 28175.62101 1.094648081 0.992347105 1.219258724 1.168093415 1.095776351 1.180023185 1.14193991 1.010888792 1.256005999 1 14.78215979 -5.248945823 24.98574106 1.136167173 1.043497598 0.166651717 0.080834307 1258.938723 2517727.165 0.019334067 0.050398349 5.64E-06 5.248945823 -0.092669575 SSDTSGSPAT(ph)PLK ddPTM_A459_MK2206_30min_R2 3 SSDTSGSPATPLK 13 0 Q7Z5R6 Q7Z5R6 APBB1IP Amyloid beta A4 precursor protein-binding family B member 1-interacting protein 1 SSDTSGS(0.001)PAT(0.999)PLK;SSDTSGSPAT(1)PLK;SSDT(0.001)S(0.001)GS(0.026)PAT(0.972)PLK 121.42 0.0036685 0 81489 77629 72418 82818 78898 72426 89271 64070 69594 83007 TRUE FALSE 87727.86049 73774.05674 74832.37998 76051.50448 75800.06809 75182.22218 77549.61047 72444.16899 75647.16032 80298.48839 1.092521942 0.918747765 0.93192763 0.947110039 0.943978767 0.936284402 0.965766754 0.902185962 0.942074525 1 16.29308521 -4.756471164 24.999593 0.94035878 1.092522176 0.761331292 0.025052262 67.26448441 338429.9459 0.005780194 0.046709406 1.75E-05 4.756471164 0.152163396 SSDTSSTSPLNSSAS(ph)QEELHQDEGLVAAPIVSNSEKPIAK ddPTM_A459_MK2206_30min_R2 1 SSDTSSTSPLNSSASQEELHQDEGLVAAPIVSNSEKPIAK 40 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(0.008)S(0.008)DT(0.042)S(0.04)S(0.062)T(0.17)S(0.157)PLNS(0.17)S(0.17)AS(0.173)QEELHQDEGLVAAPIVSNSEKPIAK 50.224 0.0014364 6531300 15093 18164 15609 21341 21782 21925 20402 15960 17436 18057 TRUE FALSE 16248.53168 17262.00217 16129.39627 19597.37203 20926.72923 22759.37124 17723.19289 18046.0268 18952.55176 17467.80157 0.930199008 0.988218357 0.923378721 1.121914052 1.198017344 1.302932779 1.014620691 1.033102347 1.084999259 1 14.09241043 -5.766366565 24.99999816 1.11730971 0.951360648 0.413285893 0.087190365 122.4051718 621074.7356 0.026421386 0.040618294 1.71E-06 5.766366565 -0.165949063 SSDVSPPLGQHETGGS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 SSDVSPPLGQHETGGSPSK 19 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 SSDVSPPLGQHET(0.006)GGS(0.887)PS(0.107)K 85.884 0.0024466 7278900 30564 24711 28056 38388 37096 33964 42283 36267 19671 36112 TRUE FALSE 32904.00334 23483.88767 28991.37304 35251.5776 35639.42465 35256.52382 36731.19131 41007.22142 21381.94802 34933.6684 0.941899458 0.672242245 0.829897757 1.009100367 1.020202752 1.009241956 1.051455315 1.173859583 0.612072794 1 15.09233053 -5.7061355 5.093450041 0.995294619 0.795444118 0.207152145 0.14831055 0.2641011 14.12872195 0.03924209 0.068060553 1.97E-06 5.7061355 -0.199850501 SSDYQFPSS(ph)PFTDTLK ddPTM_A459_MK2206_30min_R1 4 SSDYQFPSSPFTDTLK 16 0 Q9UK61-3;Q9UK61 Q9UK61-3 FAM208A Protein FAM208A 1 SSDYQFPS(0.224)S(0.767)PFT(0.008)DTLK;SSDYQFPS(0.227)S(0.773)PFTDTLK;SSDYQFPS(0.226)S(0.774)PFTDTLK;SSDYQFPS(0.227)S(0.773)PFTDTLK 213 2.46E-08 75485800 21010.8 22159.5 22453.2 16731.6 18964.5 19456.8 22246.9 18583.8 22190 22296.1 TRUE FALSE 19223.72113 20716.91252 20929.13934 18020.27073 18209.10381 20558.4272 20762.84989 18421.3238 24496.72991 25058.30919 0.767159547 0.82674822 0.835217539 0.719133545 0.726669292 0.820423559 0.828581439 0.735138339 0.977589099 1 14.61300145 -8.272691168 23.57634912 0.988794702 0.784466269 0.789233629 0.042655924 174.1204767 364833.7113 0.041633927 0.01120105 5.34E-09 8.272691168 -0.204328433 SSDYQFPSS(ph)PFTDTLK ddPTM_A459_MK2206_30min_R2 4 SSDYQFPSSPFTDTLK 16 0 Q9UK61-3;Q9UK61 Q9UK61-3 FAM208A Protein FAM208A 1 SSDYQFPS(0.237)S(0.761)PFT(0.002)DTLK;SSDYQFPS(0.156)S(0.688)PFT(0.156)DTLK;SSDYQFPS(0.128)S(0.436)PFT(0.436)DTLK;SSDYQFPS(0.23)S(0.769)PFT(0.001)DTLK 233.14 1.47E-15 46039600 188925 208022 199832 234179 203613 171477 224812 172264 167798 224877 TRUE FALSE 203389.2433 197691.93 206494.2991 215045.8266 195618.1305 178002.6774 195293.9144 194779.4963 182392.7667 217539.2819 0.934954099 0.908764285 0.94922764 0.988537908 0.899231297 0.818255332 0.897740917 0.895376203 0.838436006 1 17.73091641 -6.507297383 24.67109814 0.881112731 0.943138315 0.218186988 0.048716773 792.1156428 1254215.705 0.014734699 0.016191743 3.11E-07 6.507297383 0.062025583 SSEAPVQS(ph)PQR ddPTM_A459_MK2206_30min_R1 2 SSEAPVQSPQR 11 0 Q96NW4 Q96NW4 ANKRD27 Ankyrin repeat domain-containing protein 27 1 SSEAPVQS(1)PQR;SSEAPVQS(1)PQR 92.295 0.025209 5662200 3446.7 2914.2 2820.3 2595.5 3392 3090.9 3157.4 2816.4 2889.3 2785.9 TRUE FALSE 3153.540066 2724.48505 2628.865894 2795.40586 3256.889457 3265.904087 2946.775607 2791.776512 3189.653074 3131.038324 1.007186671 0.870153849 0.839614729 0.892804741 1.040194696 1.043073814 0.941149645 0.891645589 1.018720547 1 11.61242545 -6.236177115 24.02800911 0.984011095 0.8956463 0.337639115 0.058917414 588.7199128 559955.7493 0.018497584 0.023867705 5.81E-07 6.236177115 -0.088364795 SSEAS(ph)PTAQR ddPTM_A459_MK2206_30min_R2 2 SSEASPTAQR 10 0 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 S(0.001)S(0.001)EAS(0.989)PT(0.01)AQR;SS(0.001)EAS(0.997)PT(0.002)AQR 128.08 0.0031782 59578000 86555 65545 78003 75009 66943 70016 85837 75668 64489 84763 TRUE FALSE 93181.71735 62290.13061 80603.58109 68880.52476 64314.48146 72680.50794 74566.49879 85558.06741 70098.13665 81997.19025 1.136401346 0.759661769 0.983004184 0.840035183 0.784349821 0.88637803 0.909378706 1.043426819 0.854884618 1 16.32328685 -7.54030713 24.73057454 0.964774016 0.888845768 0.068297459 0.10938412 541.7352062 768702.3266 0.048755201 0.028157058 2.88E-08 7.54030713 -0.075928247 SSEASPT(ph)AQR ddPTM_A459_MK2206_30min_R1 1 SSEASPTAQR 10 0 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 SSEAS(0.333)PT(0.667)AQR 172.21 0.00035325 4607500 1288.8 1018.3 1072.1 1124.4 1090.3 1056.1 1562.9 1215.2 465.6 1491.5 TRUE FALSE 1179.180792 952.0084849 999.328839 1211.001483 1046.871042 1115.895469 1458.641793 1204.575635 514.0007862 1676.27828 0.703451692 0.567929858 0.596159272 0.722434632 0.624521032 0.665698221 0.870166851 0.71860123 0.306632134 1 10.71104596 -5.75686082 24.85852785 0.691797902 0.617055227 0.040326448 0.170978181 435.8958368 2366584.758 0.04589203 0.076194583 1.75E-06 5.75686082 -0.074742675 SSEGGVGVGPGGGDEPPTS(ph)PR ddPTM_A459_MK2206_30min_R1 3 SSEGGVGVGPGGGDEPPTSPR 21 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SSEGGVGVGPGGGDEPPT(0.137)S(0.863)PR;SSEGGVGVGPGGGDEPPT(0.057)S(0.943)PR;SSEGGVGVGPGGGDEPPT(0.271)S(0.729)PR 293.09 4.01E-97 25599000 7565.6 7626 7095.2 6554.7 7818.9 6253.02 7763.1 6122.4 5896.84 5312.1 TRUE FALSE 6922.105991 7129.546014 6613.597592 7059.54413 7507.456656 6607.060589 7245.237764 6068.872502 6509.83762 5970.203052 1.159442306 1.194188196 1.107767614 1.182462986 1.257487658 1.106672676 1.21356639 1.016526984 1.090387976 1 12.54356428 -7.765731954 24.99999901 1.04009308 1.173590104 0.639006531 0.047794378 70.45140554 410298.1839 0.024233229 0.012282743 1.72E-08 7.765731954 0.133497024 SSEGGVGVGPGGGDEPPTS(ph)PR ddPTM_A459_MK2206_30min_R2 4 SSEGGVGVGPGGGDEPPTSPR 21 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SSEGGVGVGPGGGDEPPT(0.313)S(0.687)PR;SSEGGVGVGPGGGDEPPT(0.015)S(0.985)PR;SSEGGVGVGPGGGDEPPT(0.228)S(0.772)PR;SSEGGVGVGPGGGDEPPT(0.03)S(0.97)PR 265.42 2.56E-49 55128000 258108 388389 309370 463167 362760 477801 335201 298058 356537 289829 TRUE FALSE 277868.9469 369102.167 319684.2414 425324.7745 348516.2197 495984.0519 291188.7061 337015.204 387547.9438 280371.9035 0.991072727 1.31647345 1.14021497 1.517002129 1.243049733 1.769021952 1.038580195 1.202029161 1.38226384 1 18.09698226 -11.28773658 2.595091354 0.927659414 1.294867533 0.135885388 0.218052075 62374447.39 47648901.78 28829500.63 0.052383749 5.16E-12 11.28773658 0.367208119 SSEKPTGLWSTASSQRVS(ph)PGLPSPNLENGAPAVGPVQPR ddPTM_A459_MK2206_30min_R1 1 SSEKPTGLWSTASSQRVSPGLPSPNLENGAPAVGPVQPR 39 2 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 SSEKPT(0.001)GLWS(0.019)T(0.106)AS(0.033)S(0.033)QRVS(0.565)PGLPS(0.242)PNLENGAPAVGPVQPR 47.156 0.0031877 9407800 655 752.46 643.64 825.28 950.96 857.59 466.39 844.44 377.7 85.252 TRUE FALSE 599.2888105 703.4747172 599.9515101 888.8432086 913.0812495 906.1460047 435.2779741 837.0571501 416.9632666 95.81366138 6.254732382 7.342112879 6.261648928 9.276789925 9.529760541 9.457377911 4.54296358 8.736302716 4.351814351 1 6.582159469 -8.51954579 3.202476309 1.008040059 7.683043863 0.648692283 1.566493331 0.140640306 3.648586372 1.556384131 0.413327642 3.02E-09 8.51954579 6.675003804 SSELDASDS(ph)SSSSNLSLAK ddPTM_A459_MK2206_30min_R1 1 SSELDASDSSSSSNLSLAK 19 0 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 SSELDASDS(0.616)S(0.191)S(0.191)S(0.003)SNLSLAK 193.19 3.15E-15 4521500 1481.7 1406.6 1277 932.46 971.58 1372.8 1159.3 1211.5 1039.7 1211.9 TRUE FALSE 1355.673634 1315.030084 1190.320798 1004.278231 932.8799112 1450.52675 1081.965212 1200.907983 1147.780536 1362.039321 0.995326356 0.965486138 0.873925429 0.737334242 0.684914082 1.064966868 0.794371495 0.881698468 0.842692658 1 10.41155264 -5.262841441 3.774649045 0.849024704 0.985940103 0.168516556 0.10643014 0.358816058 11.60340733 0.028258186 0.075156855 5.46E-06 5.262841441 0.136915399 SSELDASDS(ph)SSSSNLSLAK ddPTM_A459_MK2206_30min_R2 1 SSELDASDSSSSSNLSLAK 19 0 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 SSELDASDS(0.372)S(0.275)S(0.275)S(0.038)S(0.038)NLS(0.002)LAK 131.18 0.00027249 3848500 20758 20799 21227 21197 16569 17584 21477 18345 16932 20690 TRUE FALSE 22347.24844 19766.1519 21934.69759 19465.13729 15918.41781 18253.17144 18657.0441 20742.75449 18404.71475 20014.88699 1.116531332 0.987572496 1.095919132 0.97253296 0.795328888 0.91197974 0.932158353 1.036366305 0.91955127 1 14.28878585 -5.934449621 5.966617999 0.929101204 1.056925657 0.442458641 0.066926885 0.200328727 13.34082485 0.019667056 0.029368667 1.16E-06 5.934449621 0.127824453 SSEMS(ph)PVPMR ddPTM_A459_MK2206_30min_R1 4 SSEMSPVPMR 10 0 E9PCH4;Q8TEU7;A0A5F9ZHG7;Q8TEU7-4;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RE77 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 S(0.001)S(0.004)EMS(0.995)PVPMR;SSEMS(1)PVPMR;S(0.153)S(0.097)EMS(0.751)PVPMR;S(0.431)S(0.043)EMS(0.525)PVPMR 150.04 0.00072519 59527900 11313.3 11484.3 12290.4 11186 14133.5 13178.7 15771.7 13944.8 12338 11951.9 TRUE FALSE 10351.04443 10736.66998 11456.16189 12047.54766 13570.53277 13924.86661 14719.59867 13822.88208 13620.57925 13432.5916 0.770591762 0.799299964 0.852863113 0.896889298 1.01026914 1.036647805 1.095812268 1.029055486 1.01399489 1 13.71345006 -5.979024076 1.294911802 1.043125678 0.783373698 0.937561539 0.026491399 0.102359368 0.34848945 0.01009186 0.019279994 1.05E-06 5.979024076 -0.25975198 SSEMS(ph)PVPMR ddPTM_A459_MK2206_30min_R2 4 SSEMSPVPMR 10 0 E9PCH4;Q8TEU7;A0A5F9ZHG7;Q8TEU7-4;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RE77 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 SSEMS(1)PVPMR;S(0.312)S(0.026)EMS(0.662)PVPMR;S(0.042)S(0.005)EMS(0.952)PVPMR;S(0.001)S(0.003)EMS(0.996)PVPMR 129 0.0030223 58835000 202151 243316 254492 310523 296960 289660 346833 224332 294257 344806 TRUE FALSE 217627.836 231233.2813 262976.6363 285152.2776 285299.8583 300683.2143 301293.4105 253652.9626 319850.942 333555.0085 0.652449612 0.693238822 0.788405599 0.85488831 0.855330758 0.901450156 0.903279528 0.760453167 0.958915123 1 18.34756518 -3.574439044 0.393206472 0.91508627 1.21E-20 0.718798815 0.056514899 8.232802034 0.478650394 0.044053123 4.305912658 0.000266416 3.574439044 -0.91508627 SSEPVKETVQTTQS(ph)PTPVEK ddPTM_A459_MK2206_30min_R1 3 SSEPVKETVQTTQSPTPVEK 20 1 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 SSEPVKETVQTTQS(0.671)PT(0.329)PVEK;SSEPVKETVQTTQS(0.996)PT(0.003)PVEK;SSEPVKETVQTTQS(0.579)PT(0.421)PVEK 190.85 8.20E-16 281277000 18110.3 18694.5 18926.4 16687.8 16034.5 14805 16111.3 17636.8 14339.6 11660 TRUE FALSE 16569.92388 17477.48465 17641.7287 17973.09725 15395.81191 15643.24631 15036.54457 17482.60332 15830.25273 13104.52883 1.264442553 1.333698058 1.346231439 1.371518006 1.174846659 1.193728253 1.147431149 1.334088661 1.20799862 1 13.67777786 -6.267489402 24.51034537 1.192476399 1.330542835 0.45157695 0.081232931 379.977571 1539393.322 0.024461365 0.028475936 5.40E-07 6.267489402 0.138066436 SSEPVKETVQTTQS(ph)PTPVEK ddPTM_A459_MK2206_30min_R2 3 SSEPVKETVQTTQSPTPVEK 20 1 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 SSEPVKETVQTT(0.023)QS(0.587)PT(0.39)PVEK;SSEPVKETVQTT(0.003)QS(0.677)PT(0.321)PVEK;SSEPVKETVQT(0.008)T(0.3)QS(0.451)PT(0.241)PVEK 166.59 1.83E-09 360747000 250242 321388 298024 322287 328789 266231 346280 263030 276490 285080 TRUE FALSE 269400.7199 305428.3393 307959.9714 295955.1212 315879.0918 276362.6073 300813.02 297408.9241 300538.6004 275777.8629 0.976875798 1.107515795 1.116695764 1.073164894 1.145411341 1.002120345 1.090780155 1.078436539 1.08978508 1 18.07314713 -9.340128225 12.27065712 1 1.078131823 0.179856113 0.048195641 0 0 0.044743082 0.010851791 4.57E-10 9.340128225 0.078131823 SSEPVKETVQTTQSPT(ph)PVEK ddPTM_A459_MK2206_30min_R1 1 SSEPVKETVQTTQSPTPVEK 20 1 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 SSEPVKETVQTTQS(0.001)PT(0.999)PVEK 217.18 3.26E-19 46436000 8074.2 8176.9 8446.8 7310.1 7306.9 6472.5 6673.4 8000.8 6019.6 5019.1 TRUE FALSE 7387.446891 7644.582324 7873.45475 7873.125169 7015.8507 6838.967357 6228.229662 7930.849849 6645.358961 5640.904 1.309621098 1.35520518 1.395778895 1.395720468 1.243745807 1.212388538 1.104119067 1.4059537 1.17806631 1 12.46171067 -6.403714029 3.805723259 1.202608533 1.365342934 0.425466134 0.099068821 0.261315196 6.690015203 0.031322923 0.03554054 3.95E-07 6.403714029 0.162734401 SSEPVKETVQTTQSPT(ph)PVEK ddPTM_A459_MK2206_30min_R2 3 SSEPVKETVQTTQSPTPVEK 20 1 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 SSEPVKETVQTT(0.033)QS(0.43)PT(0.537)PVEK;SSEPVKETVQTTQS(0.006)PT(0.993)PVEK;SSEPVKETVQTTQS(0.019)PT(0.981)PVEK 180.44 3.46E-13 55505000 151455 205006 180530 187980 222736 163040 223425 163985 171090 173245 TRUE FALSE 163050.5112 194825.7001 186548.7801 172621.4327 213990.2655 169244.6014 194089.0291 185418.4025 185971.0989 167592.0298 0.972901345 1.162499794 1.113112481 1.030009797 1.27685228 1.009860681 1.158104173 1.106367664 1.109665532 1 17.35459401 -4.7483005 24.92145988 1.112303881 0.972900996 0.206755505 0.07849549 928.8108361 1761633.672 0.017968125 0.332840857 1.79E-05 4.7483005 -0.139402885 SSEPVQADESQS(ph)PR ddPTM_A459_MK2206_30min_R1 2 SSEPVQADESQSPR 14 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 SSEPVQADESQS(1)PR;SSEPVQADES(0.002)QS(0.998)PR 284.53 4.81E-55 8370700 3600.32 4137.3 4413.5 2588.1 4139.1 3820.8 4528.6 3846 3698.8 3442.9 TRUE FALSE 3294.093878 3867.961018 4113.923917 2787.43591 3974.230882 4037.130394 4226.505357 3812.374827 4083.303496 3869.432445 0.851311898 0.999619731 1.063185357 0.720373324 1.027083672 1.043339159 1.092280436 0.985254267 1.055271944 1 11.91790626 -6.482465608 24.99905086 1.037577657 0.919608306 0.320481643 0.088805219 674.3398081 417138.2472 0.027531791 0.031214275 3.29E-07 6.482465608 -0.117969351 SSEPVQADESQS(ph)PR ddPTM_A459_MK2206_30min_R2 2 SSEPVQADESQSPR 14 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 SSEPVQADESQS(1)PR;SSEPVQADES(0.001)QS(0.999)PR 241.39 1.26E-19 17521000 26951.8 30539.2 29054.2 34948 23442.9 34648 31219 26561.9 25317.9 24271.4 TRUE FALSE 29015.25053 29022.66774 30022.85253 32092.63661 22522.41395 35966.55392 27119.9078 30033.63153 27520.00518 23479.42621 1.235773408 1.23608931 1.278687659 1.366840754 0.95924039 1.531832746 1.155049854 1.279146742 1.172090192 1 14.51910953 -8.65094398 2.451702282 0.999982952 1.255478884 0.24242409 0.137383518 0.69852953 8.711688007 0.122885165 0.033293433 2.23E-09 8.65094398 0.255495932 SSEPVREDSSGMHHENQTYPPYS(ph)PQAQPQPIHR ddPTM_A459_MK2206_30min_R2 1 SSEPVREDSSGMHHENQTYPPYSPQAQPQPIHR 33 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 SSEPVREDSSGMHHENQT(0.003)Y(0.003)PPY(0.457)S(0.536)PQAQPQPIHR 62.291 0.00017786 7431500 7455 15661 11897 15056 18116 16675 18048 11706 14457 10631 TRUE FALSE 8025.760532 14883.29751 12293.64004 13825.87664 17404.67481 17309.57881 15678.27592 13236.01439 15714.44373 10284.11134 0.780403894 1.447212795 1.195401298 1.344391964 1.692384907 1.683138021 1.524514409 1.287035307 1.528031271 1 13.32812951 -4.478456318 1.957706908 1.442407219 1.31E-31 0.437512157 0.208737042 2.21600569 4.256753275 0.056345812 7.71588152 3.32E-05 4.478456318 -1.442407219 SSEQGLDEHINVS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SSEQGLDEHINVSPK 15 0 O95171-3;O95171-2;O95171 O95171-3 SCEL Sciellin 1 SSEQGLDEHINVS(1)PK;SSEQGLDEHINVS(1)PK 95.365 0.01152 0 88201 71781 76195 58587 72550 48000 87540 66244 59260 94775 TRUE FALSE 94953.73638 68216.45992 78735.30327 53800.25469 69701.32247 49826.67364 76045.89285 74902.31825 64414.32768 91682.49951 1.035680058 0.744051049 0.858782251 0.586810514 0.760246752 0.543469843 0.829448294 0.81697509 0.702580405 1 16.48435876 -10.56782202 22.1951713 1 0.758056369 0.221692259 0.132075693 0 0 0.12613322 0.030591799 2.71E-11 10.56782202 -0.241943631 SSETGAFRVPS(ph)PGMEEAGCSR ddPTM_A459_MK2206_30min_R1 2 SSETGAFRVPSPGMEEAGCSR 21 1 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 S(0.002)S(0.002)ET(0.007)GAFRVPS(0.945)PGMEEAGCS(0.044)R;SSETGAFRVPS(0.999)PGMEEAGCSR 97.388 0.00019804 40696000 4348.3 3392.1 4118.3 5299 5724.1 3817.4 3392.3 5602.2 1849.82 1092.22 TRUE FALSE 3978.454251 3171.273673 3838.76127 5707.129898 5496.096976 4033.537889 3166.005857 5553.220556 2042.115409 1227.532459 3.241017556 2.583454025 3.127217729 4.649270049 4.477353681 3.285891023 2.579162638 4.523888972 1.663593816 1 10.26154546 -8.425918698 5.104920234 1.018751763 3.531141015 0.60582157 0.726491656 0.145619019 5.476718165 0.746611513 0.194293714 3.75E-09 8.425918698 2.512389251 SSFASSSASDASKPS(ph)SPR ddPTM_A459_MK2206_30min_R1 3 SSFASSSASDASKPSSPR 18 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 SSFASSSASDAS(0.001)KPS(0.747)S(0.252)PR;SSFASSSASDASKPS(0.925)S(0.075)PR;SSFASSS(0.001)AS(0.002)DAS(0.063)KPS(0.826)S(0.107)PR 312.63 5.68E-111 22438000 8369.2 7002.6 7635.7 6635.2 6622.1 5653.8 7130.1 7335 6791.3 6732.7 TRUE FALSE 7657.355592 6546.729467 7117.409958 7146.244254 6358.327734 5973.91327 6654.464039 7270.870868 7497.279938 7566.797705 1.011967795 0.865191554 0.940610577 0.944421211 0.840293078 0.789490284 0.879429357 0.960891404 0.990812789 1 12.88546716 -7.905166095 3.933454076 0.990563804 0.892257684 0.332738942 0.058076626 0.277327504 7.971324741 0.037904722 0.016649904 1.24E-08 7.905166095 -0.09830612 SSFASSSASDASKPS(ph)SPR ddPTM_A459_MK2206_30min_R2 1 SSFASSSASDASKPSSPR 18 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 SSFASSSASDAS(0.002)KPS(0.499)S(0.499)PR 88.768 0.0035071 36927000 123440 113850 127410 106090 119860 90717 160950 112790 87885 110120 TRUE FALSE 132890.6613 108196.3746 131657.7858 97422.10763 115153.6942 94169.299 139817.0717 127532.0403 95529.07844 106526.7934 1.247485792 1.015672875 1.235912408 0.914531495 1.080983389 0.883996373 1.312506152 1.197182757 0.896761044 1 16.70085681 -4.750327572 24.67347046 1.069929754 1.247486246 0.133850215 0.141156047 922.040852 2047208.882 0.034556796 0.506837777 1.78E-05 4.750327572 0.177556492 SSFASSSASDASKPSS(ph)PR ddPTM_A459_MK2206_30min_R1 1 SSFASSSASDASKPSSPR 18 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 SSFASSSASDASKPS(0.002)S(0.998)PR 131.56 0.00028974 45406000 6043.5 6313.7 6201.7 4847.5 5436.3 5495.6 5555.8 6062.4 5993.1 5315.7 TRUE FALSE 5529.468589 5902.676982 5780.745883 5220.85529 5219.760659 5806.756123 5185.182719 6009.397076 6616.104192 5974.249047 0.925550399 0.988019906 0.967610462 0.873893145 0.87370992 0.971964188 0.86792209 1.005883255 1.107436958 1 12.54454166 -7.966905384 6.600358126 1.05506595 0.926539679 0.561571045 0.04725013 0.121885421 16.20946547 0.027152773 0.012605151 1.08E-08 7.966905384 -0.128526271 SSFASSSASDASKPSS(ph)PR ddPTM_A459_MK2206_30min_R2 2 SSFASSSASDASKPSSPR 18 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 SSFASSSASDAS(0.016)KPS(0.416)S(0.567)PR;SSFASSSASDASKPS(0.065)S(0.935)PR 115.74 0.00058084 120528000 232950 264400 212180 239970 259750 193599 329870 238080 197450 260820 TRUE FALSE 250784.8311 251270.2805 219253.9753 220363.6834 249550.9099 200966.5456 286557.6728 269197.8735 214623.8441 252309.4648 0.993957287 0.995881311 0.86898831 0.873386512 0.98906678 0.796508152 1.135738895 1.066935296 0.850637309 1 17.9448348 -7.264493865 24.99198636 1.018905806 0.921849456 0.205871087 0.089822245 447.767756 3663636.768 0.036712338 0.02591904 5.44E-08 7.264493865 -0.097056351 SSFDWLTGSSTDPLVDHT(ph)SPSSDSLLFAHK ddPTM_A459_MK2206_30min_R1 1 SSFDWLTGSSTDPLVDHTSPSSDSLLFAHK 30 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 1 SSFDWLTGSS(0.001)T(0.002)DPLVDHT(0.469)S(0.469)PS(0.026)S(0.026)DS(0.007)LLFAHK 76.55 5.40E-05 6211300 1163.4 531.02 920.44 722.15 1216 1040.9 1176.7 1019.9 823.88 889.51 TRUE FALSE 1064.446721 496.4505015 857.9630973 777.7701181 1167.564145 1099.834858 1098.20449 1010.983122 909.5252743 999.7092143 1.064756337 0.496594904 0.858212653 0.777996348 1.167903755 1.100154768 1.098523925 1.011277187 0.909789828 1 9.965364709 -6.245862684 24.02017789 1.053645209 0.781963401 0.411717789 0.144857243 443.3426088 683659.2435 0.041417734 0.053250201 5.68E-07 6.245862684 -0.271681808 SSFFSDRGS(ph)GSR ddPTM_A459_MK2206_30min_R1 5 SSFFSDRGSGSR 12 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;F6S8Q4;A0A0D9SFB3;A0A2R8YDH3;A0A2R8YF89;A0A2R8Y650;A0A2R8YCU0;A0A087WX09;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 SSFFSDRGS(0.699)GS(0.301)R;SSFFS(0.023)DRGS(0.952)GS(0.025)R;SSFFSDRGS(0.979)GS(0.021)R;SSFFS(0.011)DRGS(0.966)GS(0.023)R;SSFFSDRGS(0.985)GS(0.015)R 126.5 0.012941 77403700 29810.6 18840.2 23696.1 22578.5 23063.4 19110.1 19480.8 23458.4 15541.1 14806 TRUE FALSE 27275.05193 17613.69956 22087.67475 24317.49998 22144.73594 20192.09735 18181.27138 23253.30568 17156.65296 16640.27906 1.639098228 1.058497847 1.32736204 1.461363712 1.33079114 1.213447039 1.092606158 1.397410801 1.031031565 1 14.02239201 -9.838079295 0.045868033 7.81E-07 2.183491797 0.358166777 0.160883975 220.6851447 2.616787229 74.68414305 50.21234719 1.45E-10 9.838079295 2.183491016 SSFFSDRGS(ph)GSR ddPTM_A459_MK2206_30min_R2 3 SSFFSDRGSGSR 12 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;F6S8Q4;A0A0D9SFB3;A0A2R8YDH3;A0A2R8YF89;A0A2R8Y650;A0A2R8YCU0;A0A087WX09;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 SSFFS(0.089)DRGS(0.864)GS(0.048)R;SSFFS(0.002)DRGS(0.88)GS(0.118)R;SSFFS(0.019)DRGS(0.954)GS(0.028)R 93.478 0.011133 146601000 138675 155870 152060 185585 117545 132111 128865 96424 152945 133494 TRUE FALSE 149292.0646 148129.7225 157129.6045 170422.1118 112929.5927 137138.5767 111944.8707 109026.9479 166247.8796 129138.1017 1.156065194 1.147064426 1.216756344 1.319688842 0.874487012 1.061952862 0.866861672 0.844266304 1.287365057 1 16.9785552 -6.262876756 24.99937547 0.978893978 1.205896085 0.416154746 0.12770527 127.0050705 2208915.199 0.038387955 0.045933665 5.46E-07 6.262876756 0.227002107 SSFLSS(ph)PER ddPTM_A459_MK2206_30min_R1 2 SSFLSSPER 9 0 Q4AC94 Q4AC94 C2CD3 C2 domain-containing protein 3 1 SSFLS(0.08)S(0.92)PER;SSFLS(0.023)S(0.977)PER 131.12 0.0036806 32708000 10927.2 9702.3 9459 7864.9 11290.6 10384.6 11325.8 9256.6 8778.7 7606.6 TRUE FALSE 9997.784259 9070.678507 8816.949434 8470.655961 10840.87149 10972.56708 10570.27655 9175.670522 9691.27728 8548.963035 1.169473329 1.061026755 1.03134724 0.990840167 1.268091984 1.283496844 1.236439613 1.073308012 1.133620211 1 13.06153372 -4.40242992 19.0613685 1.127898083 9.387878599 0.014925911 0.103728501 1100.530337 173213.4697 0.027444668 2163.987109 3.96E-05 4.40242992 8.259980516 SSFLSS(ph)PER ddPTM_A459_MK2206_30min_R2 2 SSFLSSPER 9 0 Q4AC94 Q4AC94 C2CD3 C2 domain-containing protein 3 1 SSFLS(0.257)S(0.743)PER;SSFLS(0.022)S(0.978)PER 120.45 0.0065748 30515000 151964 178644 148294 190666 190299 175714 185546 149644 165941 177831 TRUE FALSE 163598.4807 169772.7987 153238.0479 175087.9779 182826.9051 182400.9194 161183.5873 169202.9846 180374.2482 172028.389 0.950996993 0.986888267 0.890771859 1.017785372 1.062771709 1.060295457 0.936959232 0.983575941 1.04851443 1 17.39228714 -5.79921958 24.95012099 1.015554583 0.947285937 0.387049771 0.041881141 179.0305855 118231.4268 0.012522526 0.018574345 1.59E-06 5.79921958 -0.068268647 SSFSQHAR ddPTM_A459_MK2206_30min_R2 2 SSFSQHAR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 148.99 0.002093 5001600 9824.5 23694 14624.2 38229 41261 48650 35821 43701 64459 20337.3 FALSE TRUE 10576.67127 22517.39041 15111.76353 35105.56841 39640.88582 50501.40984 31117.65967 49412.87075 70065.5273 19673.69557 0.537604704 1.144542993 0.768120228 1.784391158 2.014918127 2.566950864 1.581688583 2.511621194 3.561381087 1 14.26398036 -5.948097369 1.746840626 2.293273583 0.791862613 0.474471392 0.648045792 0.307057098 1.898573433 0.209186208 0.362737758 1.13E-06 5.948097369 -1.501410971 SSFSSSSELSSSHGPGFSRLNR ddPTM_A459_MK2206_30min_R2 1 SSFSSSSELSSSHGPGFSRLNR 22 1 A0A2P0CT92;A0A1B0GTE1;F2Z2X6;F2Z2X5;A0A087WUG9;B1AM99;A0A087WXL9;A0A087WZ03;A6NC89;A0A087X119;Q96NU0-2;Q9BZ76-2;Q9BZ76;Q96NU0 A0A2P0CT92 CNTNAP3;CNTNAP3B Contactin-associated protein-like 3B;Contactin-associated protein-like 3 0 74.744 0.0054016 5860600 2314.4 3916.2 4377.1 4076.5 4665.8 3629.5 3351 1272.1 4001 3043 FALSE TRUE 2491.592243 3721.727203 4523.030329 3743.43691 4482.597248 3767.623166 2911.009675 1438.367838 4348.999748 2943.707159 0.84641308 1.264299403 1.536508248 1.271674357 1.522772819 1.279890615 0.988892413 0.488624636 1.477388719 1 11.52341844 -7.270648109 5.172949764 0.942770493 1.308652421 0.200910536 0.284821455 0.250204753 21.94187884 0.115762121 0.081498957 5.36E-08 7.270648109 0.365881928 SSFTPSS(ph)PENVIGDFLLQDR ddPTM_A459_MK2206_30min_R1 1 SSFTPSSPENVIGDFLLQDR 20 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 SSFTPS(0.037)S(0.962)PENVIGDFLLQDR 190.8 1.49E-15 11835000 1898.2 2261.3 2155.8 1590.3 1880.9 1966.2 2123 1916.5 1766.8 1834.9 TRUE FALSE 1736.748122 2114.088959 2009.470302 1712.785182 1805.97977 2077.524545 1981.378544 1899.744243 1950.465183 2062.221265 0.842173511 1.025151372 0.974420319 0.830553545 0.875744907 1.007420775 0.960798231 0.921212614 0.945807909 1 11.00998342 -6.756779239 24.98578012 0.961733088 0.915236463 0.18463665 0.059246194 274.4755657 1471626.932 0.021152024 0.020474722 1.75E-07 6.756779239 -0.046496625 SSFTPSS(ph)PENVIGDFLLQDR ddPTM_A459_MK2206_30min_R2 3 SSFTPSSPENVIGDFLLQDR 20 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 SSFTPS(0.005)S(0.995)PENVIGDFLLQDR;SSFTPS(0.011)S(0.989)PENVIGDFLLQDR;SSFTPS(0.003)S(0.997)PENVIGDFLLQDR 250.38 5.50E-38 12717870 39329.2 48514.24 41212 52832.34 46091.89 51403 50164.6 35947.12 44890.13 44760 TRUE FALSE 42340.27379 46105.09339 42585.98751 48515.76882 44282.09081 53359.17718 43577.92776 40645.53201 48794.59236 43299.48487 0.977847056 1.064795425 0.983521805 1.120469885 1.022693248 1.232328222 1.006430628 0.938707057 1.126909304 1 15.40206224 -1.595115958 15.01707782 1.049723727 0.005249716 0 0.084548938 0 0 0.018957992 0 0.025402944 1.595115958 -1.044474011 SSFYSGGWQEGSSS(ph)PR ddPTM_A459_MK2206_30min_R2 2 SSFYSGGWQEGSSSPR 16 0 D3DPQ1;Q96BR9-2;Q96BR9 D3DPQ1 ZBTB8A Zinc finger and BTB domain-containing protein 8A 1 SSFYSGGWQEGS(0.053)S(0.198)S(0.749)PR;SSFYSGGWQEGS(0.036)S(0.123)S(0.841)PR 125.41 0.0012078 10558000 63060 74102 66864 76168 70557 67605 73385 56102 56522 62673 TRUE FALSE 67887.92208 70422.20243 69093.21239 69944.83075 67786.57766 70177.75565 63749.46135 63434.72403 61438.18139 60627.98514 1.119745641 1.161546145 1.139625739 1.153672361 1.118074063 1.157514232 1.051485732 1.046294444 1.013363404 1 15.88769626 -7.442864956 2.123647842 1.018991602 1.14293164 0.902314217 0.018452869 0.089553968 0.792283851 0.009629866 0.005363178 3.61E-08 7.442864956 0.123940038 SSFYVNGLT(ph)LGGQK ddPTM_A459_MK2206_30min_R1 2 SSFYVNGLTLGGQK 14 0 P07737;K7EJ44;I3L3D5 P07737 PFN1 Profilin-1 1 S(0.014)S(0.072)FY(0.003)VNGLT(0.911)LGGQK;SSFYVNGLT(1)LGGQK 100.23 0.021372 39778000 7394.9 7927.6 8029.5 7103.9 6881.8 6292.1 6844.1 6581.3 6951.5 5876.5 TRUE FALSE 6765.924923 7411.511799 7484.479911 7651.043609 6607.683334 6648.353264 6387.542577 6523.760388 7674.133301 6604.525185 1.02443775 1.122186924 1.133235123 1.158454756 1.000478179 1.006636068 0.967146373 0.987771294 1.161950797 1 12.68923913 -6.272834919 24.8615774 1.01667509 1.112168979 0.347370996 0.059513042 750.425624 1637195.86 0.018690306 0.02136602 5.34E-07 6.272834919 0.09549389 SSFYVNGLT(ph)LGGQK ddPTM_A459_MK2206_30min_R2 1 SSFYVNGLTLGGQK 14 0 P07737;K7EJ44;I3L3D5 P07737 PFN1 Profilin-1 1 SSFYVNGLT(1)LGGQK 91.657 0.039054 14166000 41012 48098 48333 48617 38192 33253 45257 42548 34040 38312 TRUE FALSE 44151.91025 45709.52326 49944.3981 44644.83558 36692.39018 34518.46622 39314.70154 48109.16969 37000.73767 37061.88258 1.191302416 1.233329774 1.347594742 1.204602478 0.990030393 0.931373795 1.060785335 1.298076793 0.998350194 1 15.17764855 -6.104178751 5.167912445 1.057216952 1.258155036 0.490892849 0.099244489 0.217150157 8.714543099 0.031799049 0.041764179 7.87E-07 6.104178751 0.200938084 SSFYVNGLTLGGQK ddPTM_A459_MK2206_30min_R2 1 SSFYVNGLTLGGQK 14 0 P07737;K7EJ44;I3L3D5 P07737 PFN1 Profilin-1 0 184.34 0.0010816 5084300 12356 17059 20032 12797 17235 13687 16192 11064 13928 14330 FALSE TRUE 13301.98486 16211.87487 20699.85688 11751.44416 16558.2673 14207.86838 14065.97095 12510.10279 15139.43226 13862.41327 0.959572089 1.169484313 1.493236168 0.847719941 1.194472202 1.024920271 1.014684144 0.902447687 1.092120972 1 13.75889081 -6.534594784 1.120652374 0.995242994 1.164840929 0.117094339 0.16401252 0.97589499 2.598179796 0.078347434 0.088599122 2.92E-07 6.534594784 0.169597935 SSGAPQDSDSSAT(ph)CSADEVDEAEGGDKNR ddPTM_A459_MK2206_30min_R2 1 SSGAPQDSDSSATCSADEVDEAEGGDKNR 29 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SSGAPQDS(0.077)DS(0.053)S(0.165)AT(0.352)CS(0.352)ADEVDEAEGGDKNR 94.837 2.73E-07 40003000 76473 102630 86881 94885 101650 68158 102080 72571 85791 106710 TRUE FALSE 82327.83168 97533.54344 89777.56918 87132.59198 97658.71025 70751.80045 88676.77338 82056.27887 93252.94611 103228.0614 0.797533447 0.944835562 0.869701203 0.844078546 0.946048089 0.685393094 0.859037476 0.794902837 0.903368181 1 16.65547568 -8.555950071 6.811032898 0.999995217 0.845901008 0.315149612 0.071599872 0.402449222 78.40005614 0.068091402 0.017621558 2.78E-09 8.555950071 -0.154094209 SSGAPQDSDSSATCS(ph)ADEVDEAEGGDKNR ddPTM_A459_MK2206_30min_R2 3 SSGAPQDSDSSATCSADEVDEAEGGDKNR 29 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SSGAPQDS(0.004)DS(0.01)S(0.031)AT(0.364)CS(0.592)ADEVDEAEGGDKNR;SSGAPQDS(0.001)DS(0.003)S(0.008)AT(0.013)CS(0.976)ADEVDEAEGGDKNR;SSGAPQDS(0.004)DS(0.006)S(0.015)AT(0.09)CS(0.885)ADEVDEAEGGDKNR 139 2.80E-14 51724700 115539 133998 126226 128656 139440 115255 151234 113587 114394 138241 TRUE FALSE 124384.7547 127343.8542 130434.3118 118144.3932 133964.885 119641.1098 131376.7941 128433.2109 124343.7833 133730.2075 0.930117114 0.952244497 0.975354142 0.883453301 1.001754858 0.894645361 0.982401782 0.960390426 0.929810741 1 17.02896586 -14.5228787 0.294643915 1.427939646 0.94362376 0.172606021 0.035544139 449.8470085 4.200761225 118.6221132 0.034261778 3.00E-15 14.5228787 -0.484315886 SSGDPEQIKEDS(ph)LSEESADAR ddPTM_A459_MK2206_30min_R1 2 SSGDPEQIKEDSLSEESADAR 21 1 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 SSGDPEQIKEDS(0.755)LS(0.171)EES(0.075)ADAR;SSGDPEQIKEDS(0.909)LS(0.085)EES(0.006)ADAR 114.21 4.45E-05 27170000 8448.2 10172.3 9685.4 9247.6 6382.9 5999.5 7320.1 7208.6 7907.6 7682.9 TRUE FALSE 7729.636227 9510.081421 9027.982033 9959.851754 6128.655577 6339.186505 6831.789485 7145.57597 8729.623318 8634.715655 0.895181328 1.101377486 1.045544798 1.153466096 0.709769241 0.734151159 0.791200285 0.827540391 1.010991406 1 13.07593295 -6.258658563 24.98880578 0.828692464 1.052402243 0.439075666 0.111554876 218.343278 1962061.029 0.033854682 0.041765391 5.51E-07 6.258658563 0.223709779 SSGEIVY(ph)CGQVFEKSPLR ddPTM_A459_MK2206_30min_R2 1 SSGEIVYCGQVFEKSPLR 18 1 M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543 M0R0P7 RPL18A 60S ribosomal protein L18a 1 S(0.013)S(0.013)GEIVY(0.965)CGQVFEKS(0.008)PLR 181.66 6.07E-09 6639900 27308 32888 29662 37145 37349 30590 39254 26397 24172 33763 TRUE FALSE 29398.72148 31254.82974 30650.91628 34110.13468 35882.4906 31754.12389 34099.90265 29847.17853 26274.43687 32661.31608 0.900108294 0.956937243 0.938447067 1.044358856 1.098623537 0.972224261 1.044045579 0.91383882 0.80445126 1 14.9952953 -10.40034735 4.209463598 1.00000052 0.970222945 0.012329901 0.080123863 118917041.6 289781268 1062.21068 0.021297403 3.98E-11 10.40034735 -0.029777575 SSGEIVYCGQVFEKS(ph)PLR ddPTM_A459_MK2206_30min_R1 2 SSGEIVYCGQVFEKSPLR 18 1 M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543 M0R0P7 RPL18A 60S ribosomal protein L18a 1 SSGEIVYCGQVFEKS(1)PLR;SSGEIVYCGQVFEKS(1)PLR 111.38 0.00072101 505540000 7939.3 7645.4 7668.4 7289.5 6850 6875.8 7289 8082.1 6937.3 6112.7 TRUE FALSE 7264.020844 7147.68307 7147.890373 7850.938553 6577.149995 7265.101854 6802.76411 8011.439052 7658.45716 6869.987425 1.05735577 1.040421565 1.040451741 1.142787907 0.957374386 1.057513123 0.990214929 1.166150468 1.114770186 1 12.74609174 -7.756549114 24.99997887 1.105345242 1.042188736 0.132957358 0.059472431 196.2677591 1003372.265 0.02786043 0.015442043 1.75E-08 7.756549114 -0.063156505 SSGEIVYCGQVFEKS(ph)PLR ddPTM_A459_MK2206_30min_R2 5 SSGEIVYCGQVFEKSPLR 18 1 M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543 M0R0P7 RPL18A 60S ribosomal protein L18a 1 SSGEIVYCGQVFEKS(1)PLR;SSGEIVY(0.017)CGQVFEKS(0.983)PLR;SSGEIVYCGQVFEKS(1)PLR;SSGEIVYCGQVFEKS(1)PLR;S(0.001)S(0.001)GEIVY(0.012)CGQVFEKS(0.986)PLR 185.28 1.11E-09 122484600 334822 422876 384939 445808 463909 384697 454216 363388 376920 446102 TRUE FALSE 360456.2298 401876.5928 397772.6741 409384.0603 445693.6017 399336.9139 394576.8936 410884.0593 409703.8203 431545.7283 0.835267751 0.93124915 0.921739339 0.948645841 1.032784181 0.925364076 0.914333911 0.952121716 0.949386805 1 18.71915392 -3.731589219 1.066074488 0.95602531 4.22E-13 0.536575649 0.033872954 11.54064265 1.918465847 0.010887902 20.99856465 0.000185529 3.731589219 -0.95602531 SSGGGYS(ph)GDR ddPTM_A459_MK2206_30min_R2 1 SSGGGYSGDR 10 0 Q92804-2;Q92804;A0A075B7F4 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 1 SS(0.001)GGGYS(0.999)GDR 106.16 0.012072 36494000 63744 48707 47666 77682 76182 82095 63095 77236 79102 64087 TRUE FALSE 68624.28965 46288.28121 49255.16065 71335.13211 73190.7119 85219.18275 54810.55071 87331.01039 85982.14898 61995.84644 1.106917537 0.7466352 0.7944913 1.150643732 1.180574443 1.374595036 0.884100369 1.408659054 1.386901767 1 15.91988394 -5.857819176 5.005299563 1.213795993 0.870217377 0.389877469 0.18097222 0.198786639 8.157094772 0.051073993 0.077850816 1.39E-06 5.857819176 -0.343578616 SSGGREDLES(ph)SGLQR ddPTM_A459_MK2206_30min_R1 1 SSGGREDLESSGLQR 15 1 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 SSGGREDLES(0.5)S(0.5)GLQR 116.61 0.0012305 75400000 1885 1785 1945.2 1495.5 2515.6 1728.2 1984.3 2061 1360.7 1238.8 TRUE FALSE 1724.670851 1668.796176 1813.165244 1610.683669 2415.398325 1826.049191 1851.930968 2042.980894 1502.149634 1392.271896 1.238745719 1.198613705 1.302306861 1.156874367 1.734861079 1.311560763 1.330150362 1.46737207 1.078919741 1 10.44322527 -8.406833191 5.130065485 1.003904859 1.341132398 0.384579696 0.154585168 0.226528603 7.973850586 0.15178104 0.039514159 3.92E-09 8.406833191 0.337227539 SSGGREDLESS(ph)GLQR ddPTM_A459_MK2206_30min_R1 3 SSGGREDLESSGLQR 15 1 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 SSGGREDLES(0.08)S(0.92)GLQR;SSGGREDLES(0.031)S(0.969)GLQR;SSGGREDLES(0.178)S(0.822)GLQR 224.55 2.64E-09 57325400 16016.6 13564.6 15296.5 12479.5 14776.3 11754.6 14872.6 15405.8 12062.5 10731.4 TRUE FALSE 14654.30406 12681.54207 14258.2162 13440.67325 14187.72868 12420.13529 13880.47599 15271.10871 13316.44004 12060.88685 1.215027074 1.051460165 1.182186383 1.114401737 1.176342077 1.029786238 1.150866944 1.266167978 1.104101233 1 13.55804837 -12.047445 1.61357507 1.95E-05 1.142418783 0.284077495 0.068265733 595574.9554 40051.25396 2164603.443 0.017754889 8.97E-13 12.047445 1.142399318 SSGGREDLESS(ph)GLQR ddPTM_A459_MK2206_30min_R2 2 SSGGREDLESSGLQR 15 1 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 1 SSGGREDLES(0.169)S(0.831)GLQR;SSGGREDLES(0.141)S(0.859)GLQR 117.53 0.0011716 172502000 173579 217671 225450 186099 212589 174351 183737 116250 142932 143603 TRUE FALSE 186868.3417 206861.7747 232966.3905 170894.1164 204241.6877 180986.0495 159612.1112 131444.2741 155363.967 138917.2459 1.345177415 1.489100747 1.677015615 1.230186471 1.470239972 1.302833556 1.148972615 0.946205587 1.11839222 1 17.08386619 -7.201875615 1.54788073 1.017294127 1.453789618 0.721393737 0.115325356 0.210094749 0.988288176 0.064036241 0.040371777 6.28E-08 7.201875615 0.436495491 SSGGREDLESSGLQR ddPTM_A459_MK2206_30min_R1 1 SSGGREDLESSGLQR 15 1 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 0 103.11 0.016523 25136000 2771.9 2477.9 2423.1 2251.4 2881.3 2183.7 2549.3 2393.6 1937.9 1454.2 FALSE TRUE 2536.135349 2316.58826 2258.626723 2424.803218 2766.53172 2307.339207 2379.240848 2372.673008 2139.35164 1634.357275 1.551763123 1.417430751 1.381966329 1.483643299 1.692733751 1.411771614 1.455765447 1.451746839 1.308986519 1 10.67450768 -8.722736219 1.233067812 0.999703678 1.486881938 0.762035562 0.082804128 0.381352196 1.128500423 0.082969647 0.025354864 1.89E-09 8.722736219 0.48717826 SSGGREDLESSGLQR ddPTM_A459_MK2206_30min_R2 1 SSGGREDLESSGLQR 15 1 Q9UK76;Q9UK76-3;J3KT51;Q9UK76-2;J3KSH8 Q9UK76 HN1 "Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed" 0 90.707 0.043081 7344900 13889 19237 14349 23292 16734 16634 18185 18285 21161 16703 FALSE TRUE 14952.35252 18281.71855 14827.3885 21388.96909 16076.93908 17267.01853 15797.28766 20674.91228 23001.54553 16157.98248 0.92538487 1.131435721 0.917650983 1.323740085 0.994984312 1.068637037 0.977676989 1.279547884 1.42354069 1 13.97995945 -7.772212894 24.99042188 1.263658306 1.055960697 0.241176711 0.147959333 270.7182925 627952.3728 0.075475852 0.036826212 1.69E-08 7.772212894 -0.207697609 SSGGSGGGPLSHFYSGS(ph)PTSYFTSGLQAGLK ddPTM_A459_MK2206_30min_R2 1 SSGGSGGGPLSHFYSGSPTSYFTSGLQAGLK 31 0 A0A087WZ13;E9PAU2;Q8IY67-2;K7EQG2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 SSGGSGGGPLS(0.001)HFY(0.084)S(0.084)GS(0.506)PT(0.076)S(0.02)Y(0.024)FT(0.15)S(0.056)GLQAGLK 83.088 3.60E-06 2149100 6932.3 14717 8706.2 16770 16901 19844 20487 12581 14399 11599 TRUE FALSE 7463.042218 13986.17518 8996.460363 15399.83736 16237.38182 20599.17733 17797.03229 14225.3799 15651.39899 11220.52558 0.665124121 1.246481288 0.801786004 1.372470233 1.447114193 1.835847811 1.586113963 1.267799783 1.394890006 1 13.45385263 -5.854747598 5.383947489 1.458917899 0.940411476 0.470837178 0.245120765 0.176369593 8.058812783 0.069206504 0.104933315 1.40E-06 5.854747598 -0.518506423 SSGHSS(ph)SELS(ph)PDAVEK ddPTM_A459_MK2206_30min_R2 1 SSGHSSSELSPDAVEK 16 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.001)S(0.001)GHS(0.168)S(0.81)S(0.024)ELS(0.996)PDAVEK 117.13 0.033958 11233000 26875 51589 44788 76551 79676 85830 88964 55285 68475 55154 TRUE FALSE 28932.57066 49027.16528 46281.20957 70296.53843 76547.5199 89096.32079 77282.91994 62510.93932 74430.83173 53354.3295 0.542272219 0.918897599 0.867431191 1.317541408 1.434701188 1.669898612 1.448484512 1.171618872 1.395028903 1 15.70331772 -5.669193927 2.070333128 1.387012746 0.723561679 0.661450146 0.188274821 0.190862463 1.654600829 0.056913271 0.121835282 2.14E-06 5.669193927 -0.663451067 SSGHSS(ph)SELSPDAVEK ddPTM_A459_MK2206_30min_R1 1 SSGHSSSELSPDAVEK 16 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.001)S(0.005)GHS(0.302)S(0.589)S(0.02)ELS(0.082)PDAVEK 217.79 1.21E-10 28327000 3479.3 1812.9 1662.1 1430.7 5859 5526.8 4378 2924 1943.1 1510.4 TRUE FALSE 3183.367264 1694.87988 1549.281283 1540.892762 5625.623623 5839.72264 4085.951608 2898.435776 2145.092198 1697.519755 1.875304988 0.998444864 0.912673492 0.907731858 3.314025423 3.440150032 2.4070127 1.707453341 1.263662583 1 10.72921265 -6.232826759 24.98702841 2.297576569 1.142398715 0.281648039 0.782129443 913.773295 797986.3225 0.247394794 0.31932504 5.85E-07 6.232826759 -1.155177854 SSGHSSSELS(ph)PDAVEK ddPTM_A459_MK2206_30min_R1 6 SSGHSSSELSPDAVEK 16 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSGHSS(0.001)S(0.008)ELS(0.99)PDAVEK;SSGHS(0.002)S(0.01)S(0.003)ELS(0.986)PDAVEK;SSGHS(0.002)S(0.072)S(0.025)ELS(0.901)PDAVEK;SSGHSSS(0.004)ELS(0.995)PDAVEK;SSGHSS(0.002)SELS(0.998)PDAVEK;SSGHSSSELS(1)PDAVEK 308.29 7.31E-102 72097900 20497.5 8888.12 11247.9 7116.49 29971.3 27896.5 24511.5 19120.1 8779.6 7472.8 TRUE FALSE 18754.07999 8309.501773 10484.42389 7664.603293 28777.47966 29475.97572 22876.38256 18952.93498 9692.270838 8398.586881 2.233004225 0.989392846 1.24835571 0.912606299 3.426466865 3.509635149 2.723837103 2.256681422 1.154035908 1 13.03593089 -6.243874839 24.67675771 2.485106214 1.313416095 0.241667701 0.844854679 916.2661502 1287279.222 0.25789299 0.332141147 5.70E-07 6.243874839 -1.171690119 SSGHSSSELS(ph)PDAVEK ddPTM_A459_MK2206_30min_R2 5 SSGHSSSELSPDAVEK 16 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSGHSS(0.002)SELS(0.998)PDAVEK;SSGHSSSELS(1)PDAVEK;SSGHS(0.001)S(0.029)S(0.008)ELS(0.962)PDAVEK;SSGHSSSELS(1)PDAVEK;SSGHSSS(0.001)ELS(0.999)PDAVEK 286.85 1.93E-74 81323200 20802.7 111421 69660.6 239387 236902 364113 197782 125865 222414 162903 TRUE FALSE 22395.37071 105887.9952 71983.04964 219828.3163 227600.0371 377969.5754 171812.9858 142315.9877 241759.1677 157587.4885 0.142113888 0.671931485 0.456781502 1.394960466 1.444277331 2.398474518 1.090270475 0.903091921 1.534126662 1 17.26579347 -5.763916195 6.729155974 1.424288539 0.443917368 0.542190342 0.408403214 0.110157533 23.99137981 0.119558493 0.191932685 1.72E-06 5.763916195 -0.980371171 SSGNS(ph)PTPVSR ddPTM_A459_MK2206_30min_R1 4 SSGNSPTPVSR 11 0 O95429;O95429-2;H0YBT1 O95429 BAG4 BAG family molecular chaperone regulator 4 1 S(0.071)S(0.176)GNS(0.747)PT(0.007)PVSR;S(0.028)S(0.019)GNS(0.948)PT(0.006)PVSR;S(0.001)S(0.001)GNS(0.992)PT(0.006)PVSR;S(0.024)S(0.033)GNS(0.924)PT(0.019)PVSR 139.64 0.0011523 118081200 12774.4 13266.2 13176.3 11846.9 13566.7 11397.8 13685.9 13291.3 9525.7 10957.3 TRUE FALSE 11687.8702 12402.56797 12281.92947 12759.35029 13026.30961 12043.13359 12772.93858 13175.09557 10515.9306 12314.77305 0.949093431 1.007129236 0.997332993 1.036101132 1.057779105 0.977941984 1.037204546 1.069861013 0.853928088 1 13.58810242 -10.30265684 5.122587801 0.999999998 1.004190135 0 0.05970901 1.52E-09 3.21E-10 0.055254006 0.013401057 4.98E-11 10.30265684 0.004190137 SSGNS(ph)PTPVSR ddPTM_A459_MK2206_30min_R2 4 SSGNSPTPVSR 11 0 O95429;O95429-2;H0YBT1 O95429 BAG4 BAG family molecular chaperone regulator 4 1 S(0.015)S(0.046)GNS(0.911)PT(0.028)PVSR;S(0.062)S(0.199)GNS(0.69)PT(0.026)PVS(0.023)R;S(0.061)S(0.04)GNS(0.888)PT(0.011)PVSR;S(0.001)S(0.007)GNS(0.991)PT(0.001)PVSR 134.06 0.0017019 192294000 182480 209494 195286 222509 212825 213473 256118 196177 179784 231572 TRUE FALSE 196450.8091 199090.8326 201796.7378 204329.3029 204468.4211 221596.8646 222489.3989 221818.0075 195421.2873 224015.8246 0.876950588 0.888735575 0.900814655 0.912119951 0.91274097 0.989201834 0.993186081 0.990189009 0.872354833 1 17.77324112 -6.635591044 4.638054516 0.969683314 0.896575848 0.503548402 0.035368646 0.188371129 6.826656092 0.012063745 0.012017258 2.31E-07 6.635591044 -0.073107466 SSGNS(ph)SSSGSGSGSTSAGSSSPGAR ddPTM_A459_MK2206_30min_R1 1 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 S(0.022)S(0.022)GNS(0.238)S(0.238)S(0.238)S(0.238)GS(0.005)GSGSTSAGSSSPGAR 88.531 4.43E-05 659020 182.05 242.73 64.496 159.41 144.27 169.94 130.6 173.9 126.06 0 TRUE FALSE 166.5656915 226.9282329 60.11819122 171.6877858 138.5234204 179.5618559 121.8879123 172.3796106 139.1643881 0 0 SSGNSS(ph)SSGSGSGSTSAGSSSPGAR ddPTM_A459_MK2206_30min_R1 1 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNS(0.028)S(0.324)S(0.324)S(0.324)GSGSGSTSAGSSSPGAR 409.78 0 0 632.13 530.53 450.9 612.69 582.78 682.79 765.38 822.62 705.9 741.66 TRUE FALSE 578.3640241 495.9924006 420.2941643 659.87949 559.5666385 721.4489797 714.3228967 815.4279201 779.2808311 833.54244 0.693862719 0.595041568 0.504226473 0.791656739 0.671311515 0.865521592 0.856972438 0.978268029 0.934902404 1 9.703111846 -6.84572808 0.802523579 0.981990395 0.603085321 0.801706361 0.070931824 0.264619894 0.367618156 0.048542164 0.042651829 1.43E-07 6.84572808 -0.378905074 SSGNSS(ph)SSGSGSGSTSAGSSSPGAR ddPTM_A459_MK2206_30min_R2 2 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 S(0.041)S(0.041)GNS(0.118)S(0.341)S(0.341)S(0.118)GS(0.001)GSGSTSAGSSSPGAR;S(0.005)S(0.005)GNS(0.178)S(0.447)S(0.178)S(0.178)GS(0.009)GSGSTSAGSSSPGAR 126.74 4.69E-08 1515350 3541.31 2465.5 1475.8 1373.3 2538.64 3022.4 3735 1524.12 1791.2 4098.4 TRUE FALSE 3812.435416 2343.066855 1525.002435 1261.096997 2438.960238 3137.41955 3244.590013 1723.327717 1946.995338 3964.669544 0.961602316 0.590986671 0.384648057 0.31808376 0.615173651 0.791344528 0.818375902 0.434671212 0.491086411 1 11.95298491 -6.521199541 24.99535018 0.681444425 0.54217841 0.078567063 0.21972073 191.8106548 2855208.853 0.075665957 0.076725469 3.01E-07 6.521199541 -0.139266014 SSGNSSS(ph)SGSGSGSTSAGSS(ph)SPGAR ddPTM_A459_MK2206_30min_R1 1 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 2 SSGNS(0.003)S(0.034)S(0.768)S(0.187)GS(0.007)GSGSTSAGS(0.123)S(0.506)S(0.371)PGAR 167.72 8.41E-15 464760 148.03 137.22 0 137.74 194.56 110.32 214.28 65.273 202.87 0 TRUE FALSE 135.4392712 128.2869531 0 148.3487587 186.8102632 116.5662231 199.9857722 64.70232504 223.9590625 0 0 SSGNSSS(ph)SGSGSGSTSAGSSSPGAR ddPTM_A459_MK2206_30min_R1 1 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSS(0.004)S(0.361)S(0.361)GS(0.039)GS(0.031)GS(0.088)T(0.088)S(0.026)AGSS(0.002)SPGAR 306.46 4.14E-116 11168000 2334.7 1645.2 1447.2 1750.8 1884 1452.1 2260 1810.3 2002.1 1974.1 TRUE FALSE 2136.121505 1538.097181 1348.968096 1885.646919 1808.956291 1534.316647 2109.239524 1794.472738 2210.22546 2218.666412 0.96279526 0.693253016 0.608008527 0.849901053 0.81533496 0.691549049 0.950678981 0.808806916 0.996195484 1 11.11547705 -7.919038476 0.884855951 1.004744095 0.763442987 0.373330949 0.105122891 0.61196907 0.901014137 0.096281076 0.038690509 1.20E-08 7.919038476 -0.241301108 SSGNSSS(ph)SGSGSGSTSAGSSSPGAR ddPTM_A459_MK2206_30min_R2 2 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNS(0.015)S(0.34)S(0.621)S(0.024)GSGSGSTSAGSSSPGAR;S(0.004)S(0.004)GNS(0.003)S(0.1)S(0.443)S(0.443)GS(0.003)GSGSTSAGSSSPGAR 178.17 1.97E-20 6583400 29535.6 19455.4 16656.9 18779 19441.2 26682.7 33296.4 15279 17707.8 24958 TRUE FALSE 31796.86825 18489.27313 17212.23273 17244.69563 18677.8408 27698.12885 28924.54268 17276.01776 19247.99244 24143.6225 1.316988295 0.765803604 0.712910117 0.714254691 0.773613852 1.147223406 1.198020002 0.715552016 0.797228851 1 14.55935453 -6.712803455 24.99925691 0.96798009 0.83576 0.064054399 0.211929319 332.1994586 170751.8764 0.073851598 0.073851456 1.94E-07 6.712803455 -0.132220089 SSGNSSSSGSGSGSTS(ph)AGSSSPGARR ddPTM_A459_MK2206_30min_R1 1 SSGNSSSSGSGSGSTSAGSSSPGARR 26 1 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGS(0.001)GS(0.017)T(0.055)S(0.513)AGS(0.098)S(0.098)S(0.219)PGARR 67.832 0.00063839 743670 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 SSGNSSSSGSGSGSTSAGS(ph)SSPGAR ddPTM_A459_MK2206_30min_R1 1 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGS(0.003)GS(0.014)GS(0.014)T(0.011)S(0.046)AGS(0.304)S(0.304)S(0.304)PGAR 65.477 0.0022133 1692900 0 154.55 0 0 0 0 111.75 0 131.8 63.173 TRUE FALSE 0 144.4887669 0 0 0 0 104.2953614 0 145.5010817 70.99934817 0 2.035071738 0 0 0 0 1.468962238 0 2.049329823 1 6.149733875 -8.259549579 24.99948723 1.524664917 0.467204528 0.261297563 0.729517215 226.0922268 2991000.487 0.549580392 0.183641616 5.50E-09 8.259549579 -1.057460388 SSGNSSSSGSGSGSTSAGS(ph)SSPGAR ddPTM_A459_MK2206_30min_R2 2 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGSGSTSAGS(0.445)S(0.277)S(0.277)PGAR;SSGNSSSSGSGSGS(0.007)T(0.061)S(0.156)AGS(0.259)S(0.259)S(0.259)PGAR 122.6 7.70E-08 2217560 539.86 0 427.34 541.97 0 1002.95 468.91 0 0 446.68 TRUE FALSE 581.1920967 0 441.5873023 497.6893173 0 1041.117965 407.3415537 0 0 432.1048682 1.34502557 0 1.021944752 1.15177901 0 2.409410404 0.942691425 0 0 1 8.755237674 -7.746432833 23.45039272 0.250000214 0.969065266 0.15151802 0.694153547 188.3839804 294385.2087 0.326323662 0.187219711 1.79E-08 7.746432833 0.719065052 SSGNSSSSGSGSGSTSAGSS(ph)SPGAR ddPTM_A459_MK2206_30min_R1 2 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGSGS(0.001)T(0.002)S(0.009)AGS(0.054)S(0.476)S(0.459)PGAR;SSGNSSSSGSGS(0.002)GS(0.003)T(0.001)S(0.102)AGS(0.129)S(0.611)S(0.152)PGAR 112.42 1.38E-07 2186200 72.898 190.564 64.002 59.812 63.005 0 371.75 0 63.112 133.64 TRUE FALSE 66.6976423 178.158249 59.65772256 64.4187306 60.49537743 0 346.9512358 0 69.67271825 150.1963321 0.444069714 1.186169106 0.397198265 0.428896829 0.402775331 0 2.309984744 0 0.463877628 1 7.230705772 -2.823096094 14.75915111 0.656220428 0.593361673 0 0.652703876 0 0 0.145094045 0 0.001502809 2.823096094 -0.062858755 SSGNSSSSGSGSGSTSAGSS(ph)SPGAR ddPTM_A459_MK2206_30min_R2 3 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGS(0.01)GS(0.001)GS(0.004)T(0.017)S(0.006)AGS(0.13)S(0.611)S(0.221)PGAR;SSGNSSSSGS(0.001)GSGS(0.001)T(0.012)S(0.036)AGS(0.077)S(0.524)S(0.349)PGAR;SSGNSSSSGSGS(0.003)GS(0.004)T(0.004)S(0.005)AGS(0.09)S(0.447)S(0.447)PGAR 118.04 7.77E-08 4253770 1801.43 1110.5 1037.05 1745.49 1229.4 1089.6 5071.35 428.2 1473.6 0 TRUE FALSE 1939.348866 1055.354185 1071.624729 1602.877883 1181.127579 1131.065492 4405.475653 484.1672102 1601.771064 0 0 SSGNSSSSGSGSGSTSAGSS(ph)SPGARR ddPTM_A459_MK2206_30min_R1 2 SSGNSSSSGSGSGSTSAGSSSPGARR 26 1 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGSGS(0.001)T(0.021)S(0.016)AGS(0.1)S(0.431)S(0.431)PGARR;SSGNSSSSGSGSGST(0.001)S(0.001)AGS(0.158)S(0.42)S(0.42)PGARR 95.926 2.02E-06 20741860 182.158 59.507 0 263.72 62.47 0 0 299 0 0 TRUE FALSE 166.6645056 55.63308348 0 284.0317601 59.98168762 0 0 296.3858745 0 0 0 SSGNSSSSGSGSGSTSAGSSS(ph)PGAR ddPTM_A459_MK2206_30min_R1 9 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGSGSTSAGSS(0.004)S(0.995)PGAR;SSGNSSSSGSGSGSTSAGS(0.01)S(0.01)S(0.979)PGAR;SSGNSSSSGSGSGSTSAGS(0.006)S(0.007)S(0.987)PGAR;SSGNSSSSGSGSGSTSAGS(0.006)S(0.126)S(0.868)PGAR;SSGNSSSSGSGSGSTSAGS(0.002)S(0.063)S(0.935)PGAR;SSGNSSSSGSGSGSTS(0.001)AGS(0.047)S(0.061)S(0.891)PGAR;SSGNSSSSGSGSGSTS(0.001)AGS(0.066)S(0.396)S(0.537)PGAR;SSGNSSSSGSGSGS(0.003)T(0.003)S(0.018)AGS(0.071)S(0.178)S(0.727)PGAR;SSGNSSSS(0.001)GS(0.007)GS(0.121)GS(0.062)T(0.062)S(0.18)AGS(0.051)S(0.051)S(0.466)PGAR 252.39 5.68E-53 167108720 2175.215 2185.85 1453.894 1355.14 1890.417 1257.939 1966.496 1302.975 2081.56 1955.188 TRUE FALSE 1990.201542 2043.550768 1355.207726 1459.513118 1815.117688 1329.162419 1835.31464 1291.583227 2297.945611 2197.41145 0.905702726 0.929980941 0.616729164 0.664196556 0.826025407 0.604876442 0.835216654 0.587774869 1.045751177 1 11.10158931 -8.280325499 24.67651058 1.022875706 0.746284448 0.460944532 0.119631626 717.0437883 936875.2761 0.114966197 0.029893312 5.24E-09 8.280325499 -0.276591259 SSGNSSSSGSGSGSTSAGSSS(ph)PGAR ddPTM_A459_MK2206_30min_R2 6 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGSGSTS(0.001)AGS(0.034)S(0.28)S(0.684)PGAR;SSGNSSSSGSGSGSTS(0.003)AGS(0.011)S(0.225)S(0.761)PGAR;SSGNSSSSGSGSGSTSAGSS(0.083)S(0.917)PGAR;SSGNSSSSGSGSGSTSAGS(0.083)S(0.237)S(0.68)PGAR;SSGNSSSSGSGSGSTSAGS(0.05)S(0.194)S(0.756)PGAR;SSGNSSSSGSGSGSTSAGS(0.04)S(0.224)S(0.736)PGAR 246.2 8.41E-47 236920330 212209.8 113773.58 114442.6 135794.69 100175.17 142416.27 184992.6 95070.24 139293.4 145732.84 TRUE FALSE 228456.7454 108123.7495 118258.0592 124699.8294 96241.78949 147836.021 160702.8494 107496.2468 151408.8881 140977.5894 1.620518172 0.766957003 0.838842966 0.884536542 0.682674388 1.048649091 1.1399177 0.762505922 1.073992603 1 17.10510632 -4.754667459 24.99994685 0.904729841 1.620519389 0.686278797 0.143881542 135.2652217 499315.0037 0.036102505 0.344811553 1.76E-05 4.754667459 0.715789549 SSGNSSSSGSGSGSTSAGSSS(ph)PGARR ddPTM_A459_MK2206_30min_R1 2 SSGNSSSSGSGSGSTSAGSSSPGARR 26 1 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGSGSTS(0.001)AGS(0.22)S(0.22)S(0.559)PGARR;SSGNSSSSGSGSGS(0.003)T(0.013)S(0.048)AGS(0.301)S(0.246)S(0.389)PGARR 108.3 1.38E-08 21757800 0 0 78.363 75.349 139.79 0 69.883 0 0 0 TRUE FALSE 0 0 73.04393789 81.15239304 134.2218683 0 65.22123258 0 0 0 0 SSGNSSSSGSGSGSTSAGSSS(ph)PGARR ddPTM_A459_MK2206_30min_R2 3 SSGNSSSSGSGSGSTSAGSSSPGARR 26 1 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGSGSTS(0.007)AGS(0.236)S(0.236)S(0.52)PGARR;SSGNS(0.001)S(0.001)S(0.001)SGS(0.001)GS(0.001)GS(0.003)T(0.014)S(0.036)AGS(0.146)S(0.23)S(0.567)PGARR;SSGNSSSSGSGSGST(0.001)S(0.001)AGS(0.134)S(0.368)S(0.496)PGARR 82.042 6.38E-05 27810430 0 0 0 0 0 530.46 0 0 0 0 TRUE FALSE 0 0 0 0 0 550.647027 0 0 0 0 0 SSGNSSSSGSGSGSTSAGSSSPGAR ddPTM_A459_MK2206_30min_R1 1 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 0 88.319 0.014806 0 0 0 0 0 0 0 0 0 0 0 FALSE TRUE 0 0 0 0 0 0 0 0 0 0 0 SSGPT(ph)SLFAVTVAPPGAR ddPTM_A459_MK2206_30min_R1 1 SSGPTSLFAVTVAPPGAR 18 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;A0A1X7SBS1;A0A1W2PP22 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 SSGPT(0.641)S(0.359)LFAVTVAPPGAR 244.18 4.03E-25 22111000 1194.3 1086.9 1249.6 1181.8 1277.6 1279.3 1392.7 1227 1273.3 1106 TRUE FALSE 1092.718513 1016.142612 1164.780634 1272.822441 1226.710487 1351.73286 1299.795524 1216.272468 1405.664092 1243.01963 0.879083875 0.817479136 0.937057312 1.023976139 0.986879416 1.087458981 1.045675782 0.978482109 1.130846254 1 10.27963336 -5.586984402 2.223065629 1.038318871 0.846362984 0.730789181 0.046024598 0.148192498 1.463540311 0.012865284 0.029148825 2.59E-06 5.586984402 -0.191955887 SSGPT(ph)SLFAVTVAPPGAR ddPTM_A459_MK2206_30min_R2 1 SSGPTSLFAVTVAPPGAR 18 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;A0A1X7SBS1;A0A1W2PP22 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 SS(0.001)GPT(0.598)S(0.401)LFAVTVAPPGAR 147.53 0.00021065 0 7683.7 11120 12037 11865 8693.8 13617 11239 7015.9 10226 8708.8 TRUE FALSE 8271.96998 10567.79697 12438.30757 10895.59155 8352.437729 14135.20448 9763.3058 7932.902219 11115.439 8424.632569 0.981879021 1.254392626 1.476421372 1.293301691 0.991430506 1.677842251 1.158899895 0.941631834 1.319397482 1 13.04039805 -7.512517513 24.87361934 1.088361933 1.286587108 0.14434414 0.21280945 910.3719463 2185494.357 0.093077935 0.058050389 3.07E-08 7.512517513 0.198225175 SSGPTS(ph)LFAVTVAPPGAR ddPTM_A459_MK2206_30min_R2 3 SSGPTSLFAVTVAPPGAR 18 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;A0A1X7SBS1;A0A1W2PP22 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.003)S(0.013)GPT(0.38)S(0.604)LFAVTVAPPGAR;SSGPT(0.261)S(0.739)LFAVTVAPPGAR;S(0.002)S(0.001)GPT(0.048)S(0.949)LFAVTVAPPGAR 218.28 2.94E-14 30314600 47609.5 67008 58516 68250 63126 62899 59550 46785.3 60976 52052 TRUE FALSE 51254.51993 63680.48016 60466.89423 62673.75668 60647.35606 65292.66552 51731.01347 52900.29935 66279.58226 50353.5475 1.017892928 1.264667205 1.200846757 1.244674105 1.204430652 1.296684519 1.027355887 1.050577407 1.316284265 1 15.6198058 -7.265400395 24.99851704 1.102769178 1.209191237 0.192191806 0.106414463 589.6493591 3721339.307 0.042133097 0.02963274 5.43E-08 7.265400395 0.106422059 SSGPYGGGGQYFAKPR ddPTM_A459_MK2206_30min_R1 1 SSGPYGGGGQYFAKPR 16 1 F8W6I7;P09651-2;P09651;P09651-3;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 0 239.38 5.97E-21 9393500 1761.9 1498 1837.4 1589.9 1628.2 1217.3 1417.1 1567.9 1186.3 1250.3 FALSE TRUE 1612.041153 1400.479928 1712.682407 1712.354373 1563.345346 1286.222474 1322.567845 1554.192016 1309.62013 1405.196603 1.147199722 0.996643405 1.218820486 1.218587043 1.112545634 0.915332752 0.941197724 1.10603172 0.931983558 1 10.45655628 -6.637466787 6.25489228 0.983817319 1.142817283 0.528775011 0.075787241 0.187792896 9.590613217 0.026298603 0.026238601 2.30E-07 6.637466787 0.158999964 SSGRNS(ph)PSAASTSSNDSK ddPTM_A459_MK2206_30min_R1 3 SSGRNSPSAASTSSNDSK 18 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 S(0.009)S(0.009)GRNS(0.955)PS(0.027)AASTSSNDSK;S(0.095)S(0.095)GRNS(0.804)PS(0.007)AASTSSNDSK;S(0.286)S(0.286)GRNS(0.407)PS(0.021)AAS(0.001)TSSNDSK 135.54 0.00019736 43958190 5460.41 5407.4 4685.38 3889.77 3581.72 3494.7 4873.87 4958.85 724.87 3481.48 TRUE FALSE 4995.973456 5055.377277 4367.34946 4189.360759 3439.052508 3692.566894 4548.743025 4915.495297 800.2228305 3912.792026 1.276830821 1.292012773 1.116172143 1.070683218 0.878925454 0.943716627 1.162531255 1.256262859 0.204514532 1 11.93398271 -4.302599828 0.326568447 0.8498452 1.862600731 0.249785251 0.26257953 15.06050714 1.019693788 0.264290264 6.412430593 4.98E-05 4.302599828 1.012755531 SSGRNS(ph)PSAASTSSNDSK ddPTM_A459_MK2206_30min_R2 4 SSGRNSPSAASTSSNDSK 18 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 S(0.083)S(0.083)GRNS(0.829)PS(0.004)AASTSSNDSK;S(0.056)S(0.056)GRNS(0.856)PS(0.031)AASTSSNDSK;S(0.116)S(0.116)GRNS(0.761)PS(0.006)AASTSSNDSK;S(0.308)S(0.064)GRNS(0.628)PSAASTSSNDSK 103.35 0.001143 18208600 11018.68 14110.26 15462.2 17238.3 13162.23 11669.64 15564.1 11903.23 11556.9 17165.3 TRUE FALSE 11862.27861 13409.56501 15977.70203 15829.87575 12645.41472 12113.73633 13520.51497 13459.02303 12562.09827 16605.19767 0.714371419 0.807552266 0.96221089 0.95330848 0.761533525 0.729514732 0.814233907 0.810530733 0.756516033 1 14.01934728 -3.631348911 15.4114895 0.826891175 0.235042044 0 0.098197984 0 0 0.023054057 0 0.000233696 3.631348911 -0.591849131 SSGS(ph)ETEQVVDFSDR ddPTM_A459_MK2206_30min_R1 1 SSGSETEQVVDFSDR 15 0 O95251;O95251-4;O95251-2 O95251 KAT7 Histone acetyltransferase KAT7 1 S(0.094)S(0.094)GS(0.813)ETEQVVDFSDR 349.2 1.05E-166 14223000 1310.3 1096.1 1335.9 1165.1 1461.7 1109.2 1341.8 1041 1414.2 869.13 TRUE FALSE 1198.852104 1024.743691 1245.22283 1254.836204 1403.477394 1172.001945 1252.29097 1031.898647 1561.211151 976.804386 1.227320558 1.049077692 1.274792423 1.28463408 1.436804967 1.199832804 1.282028406 1.056402553 1.598284337 1 9.931925868 -10.80380281 4.43564585 0.999832511 1.259150188 0.211657396 0.154194503 0.000246 3.99E-05 0.14380596 0.034855646 1.57E-11 10.80380281 0.259317677 SSGS(ph)ETEQVVDFSDR ddPTM_A459_MK2206_30min_R2 3 SSGSETEQVVDFSDR 15 0 O95251;O95251-4;O95251-2 O95251 KAT7 Histone acetyltransferase KAT7 1 S(0.273)S(0.128)GS(0.598)ET(0.001)EQVVDFSDR;S(0.28)S(0.036)GS(0.676)ET(0.008)EQVVDFSDR;S(0.187)S(0.005)GS(0.807)ETEQVVDFSDR 274.52 2.13E-45 35405000 37568 47443 39697.8 46793 41862 42625 49636 35145 45980 51564 TRUE FALSE 40444.23496 45087.04961 41021.30484 42969.86222 40218.28754 44247.12424 43118.73358 39738.57217 49979.25729 49881.4709 0.810806783 0.903883723 0.822375606 0.861439357 0.806277097 0.887045298 0.864423859 0.796659991 1.001960375 1 15.60621639 -8.272957973 24.91618076 1.000980235 0.846806003 0.774389414 0.033843046 341.029435 737681.671 0.029682249 0.007939324 5.33E-09 8.272957973 -0.154174231 SSGS(ph)PEPSPAIAK ddPTM_A459_MK2206_30min_R1 1 SSGSPEPSPAIAK 13 0 Q66K64;K7ELE9 Q66K64 DCAF15 DDB1- and CUL4-associated factor 15 1 S(0.016)S(0.002)GS(0.977)PEPS(0.005)PAIAK 142.39 0.00077791 22107000 3777.6 3536.6 3693 3048.8 3399.2 2835.3 3128 3244 2840.1 2630 TRUE FALSE 3456.295283 3306.366697 3442.329449 3283.619104 3263.802666 2995.832236 2919.336827 3215.63805 3135.338558 2955.824255 1.169316909 1.118593804 1.164592057 1.110897949 1.104193749 1.013535304 0.987655752 1.087898932 1.060732401 1 11.52934478 -6.496151402 2.299883585 1.033193206 1.142595046 0.72356195 0.032372956 0.175441449 1.854353197 0.011963909 0.013087065 3.19E-07 6.496151402 0.10940184 SSGS(ph)PEPSPAIAK ddPTM_A459_MK2206_30min_R2 1 SSGSPEPSPAIAK 13 0 Q66K64;K7ELE9 Q66K64 DCAF15 DDB1- and CUL4-associated factor 15 1 SSGS(0.999)PEPSPAIAK 155.66 0.00036548 5486900 33344 38018 35407 34744 37838 31999 41349 30183 26486 37092 TRUE FALSE 35896.84228 36130.0814 36587.45171 31905.30406 36352.29 33216.74437 35919.82663 34128.02173 28789.7044 35881.69108 1.000422254 1.006922481 1.019669102 0.889180613 1.013115294 0.925729623 1.001062814 0.951126346 0.802350824 1 15.13096026 -5.730629176 0.492004882 0.92856012 1.030131456 0.156005478 0.061364304 3.793079541 1.356054943 0.046450938 0.203440291 1.86E-06 5.730629176 0.101571335 SSGS(ph)PYGGGYGSGGGSGGYGSR ddPTM_A459_MK2206_30min_R1 24 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 S(0.23)S(0.004)GS(0.766)PYGGGYGSGGGSGGYGSR;S(0.074)S(0.074)GS(0.852)PYGGGYGSGGGSGGYGSR;SSGS(0.999)PYGGGYGSGGGSGGYGSR;SS(0.001)GS(0.999)PYGGGYGSGGGSGGYGSR;S(0.004)S(0.011)GS(0.985)PYGGGYGSGGGSGGYGSR;S(0.002)S(0.005)GS(0.994)PYGGGYGSGGGSGGYGSR;SS(0.001)GS(0.999)PYGGGYGSGGGSGGYGSR;S(0.057)S(0.009)GS(0.933)PYGGGYGSGGGSGGYGSR;S(0.001)S(0.002)GS(0.994)PY(0.003)GGGYGSGGGSGGYGSR;S(0.002)S(0.005)GS(0.992)PY(0.001)GGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.003)S(0.131)GS(0.866)PYGGGYGSGGGSGGYGSR;SSGS(0.999)PYGGGYGSGGGSGGYGSR;SS(0.001)GS(0.999)PYGGGYGSGGGSGGYGSR;SS(0.001)GS(0.998)PYGGGYGSGGGSGGYGSR;S(0.005)S(0.015)GS(0.979)PY(0.001)GGGYGSGGGSGGYGSR;SSGS(0.999)PYGGGYGSGGGSGGYGSR;S(0.009)S(0.024)GS(0.966)PY(0.001)GGGYGSGGGSGGYGSR;S(0.222)S(0.024)GS(0.754)PYGGGYGSGGGSGGYGSR;SS(0.002)GS(0.996)PY(0.001)GGGYGSGGGSGGYGSR;S(0.004)S(0.001)GS(0.995)PYGGGYGSGGGSGGYGSR;S(0.034)S(0.001)GS(0.966)PYGGGYGSGGGSGGYGSR;S(0.001)S(0.001)GS(0.998)PYGGGYGSGGGSGGYGSR;S(0.001)S(0.001)GS(0.998)PYGGGYGSGGGSGGYGSR 386.34 1.40E-279 1869759300 51527.65 49657.86 48947.7 42802.94 53746.67 46669.28 52280.87 47574.44 42799.23 39847.16 TRUE FALSE 47144.95279 46425.12429 45625.2665 46099.62986 51605.82632 49311.6543 48793.30855 47158.50169 47248.36312 44783.72701 1.052725084 1.036651645 1.018791189 1.029383504 1.152334336 1.101106531 1.089532109 1.053027625 1.055034189 1 15.45068698 -3.96506265 20.19455195 1.062405155 1.054922207 0 0.0425525 0 0 0.010402716 0 0.000108377 3.96506265 -0.007482948 SSGS(ph)PYGGGYGSGGGSGGYGSR ddPTM_A459_MK2206_30min_R2 34 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.278)S(0.037)GS(0.685)PYGGGYGSGGGSGGYGSR;S(0.009)S(0.03)GS(0.96)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.051)S(0.006)GS(0.943)PYGGGYGSGGGSGGYGSR;S(0.005)S(0.005)GS(0.986)PY(0.003)GGGYGSGGGSGGYGSR;S(0.019)S(0.019)GS(0.963)PYGGGYGSGGGSGGYGSR;S(0.089)S(0.009)GS(0.902)PYGGGYGSGGGSGGYGSR;S(0.006)S(0.006)GS(0.989)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.367)S(0.007)GS(0.626)PYGGGYGSGGGSGGYGSR;S(0.006)S(0.101)GS(0.893)PYGGGYGSGGGSGGYGSR;S(0.007)S(0.017)GS(0.942)PY(0.022)GGGY(0.006)GS(0.007)GGGSGGYGSR;S(0.001)S(0.001)GS(0.998)PYGGGYGSGGGSGGYGSR;SS(0.002)GS(0.998)PYGGGYGSGGGSGGYGSR;S(0.425)S(0.046)GS(0.528)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.006)S(0.001)GS(0.993)PYGGGYGSGGGSGGYGSR;SSGS(0.619)PY(0.003)GGGY(0.001)GS(0.375)GGGS(0.001)GGYGSR;S(0.065)S(0.01)GS(0.924)PY(0.001)GGGYGSGGGSGGYGSR;SSGS(0.991)PY(0.001)GGGYGS(0.005)GGGS(0.002)GGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.019)S(0.061)GS(0.92)PYGGGYGSGGGSGGYGSR;SSGS(0.999)PYGGGYGSGGGSGGYGSR;S(0.054)S(0.176)GS(0.77)PYGGGYGSGGGSGGYGSR;S(0.005)S(0.206)GS(0.789)PYGGGYGSGGGSGGYGSR;S(0.003)S(0.027)GS(0.959)PYGGGYGS(0.008)GGGS(0.003)GGYGSR;S(0.215)S(0.005)GS(0.779)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.004)S(0.004)GS(0.991)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.003)S(0.01)GS(0.987)PYGGGYGSGGGSGGYGSR;S(0.002)S(0.007)GS(0.991)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR 343.72 1.18E-183 1593479700 555029.5 679467.7 616813.4 729258.4 680134.1 679657.1 729710.8 577228.7 586044.1 613589.2 TRUE FALSE 597522.9853 645726.3221 637377.6509 669675.6559 653428.6178 705521.9272 633898.8954 652674.473 637017.1565 593567.8347 1.006663351 1.087872833 1.073807598 1.128220933 1.100849102 1.188612128 1.067946843 1.099578574 1.073200263 1 19.17905339 -1.588643007 18.72032099 1.089643392 0.005441971 0 0.052367893 0 0 0.011720714 0 0.025784398 1.588643007 -1.084201422 SSGS(ph)TTELHCVTDER ddPTM_A459_MK2206_30min_R1 1 SSGSTTELHCVTDER 15 0 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.021)S(0.021)GS(0.861)T(0.077)T(0.021)ELHCVTDER 79.471 0.031018 3469600 1820 1453.4 1621.5 2320.7 1123.3 1380.5 1050.2 889.05 1105.7 953.23 TRUE FALSE 1665.199443 1358.783396 1511.437098 2499.440716 1078.556582 1458.662717 980.1430742 881.2771296 1220.641472 1071.323329 1.554338824 1.268322419 1.410813204 2.333040501 1.0067517 1.361552276 0.914890069 0.822606123 1.139377291 1 10.06517824 SSGSETEQVVDFS(ph)DR ddPTM_A459_MK2206_30min_R2 1 SSGSETEQVVDFSDR 15 0 O95251;O95251-4;O95251-2 O95251 KAT7 Histone acetyltransferase KAT7 1 SSGSETEQVVDFS(1)DR 151.11 0.00025281 3114100 12496 9546.4 7470.1 7790.7 7337.4 9511.7 8615.3 6282.2 5921.2 8622.7 TRUE FALSE 13452.70337 9072.339658 7719.149406 7154.174889 7049.296809 9873.674409 7484.100761 7103.30511 6436.215273 8341.342005 1.612774462 1.087635497 0.925408573 0.857676724 0.845103438 1.183703342 0.897229817 0.851578212 0.77160429 1 13.0260638 -4.723547788 2.198233415 0.915241623 1.866579591 0.795109168 0.106288668 0.354757424 1.744018612 0.029416024 0.70642927 1.89E-05 4.723547788 0.951337968 SSGSPYGGGYGS(ph)GGGSGGYGSR ddPTM_A459_MK2206_30min_R2 1 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 S(0.005)S(0.005)GS(0.257)PY(0.019)GGGY(0.045)GS(0.652)GGGS(0.016)GGYGSR 90.229 0.00041541 3116300 3823.9 3882.8 3690.8 4868.3 3426.5 5174.1 4515.5 3096.4 3105.5 3573.7 TRUE FALSE 4116.660724 3689.985798 3813.84943 4470.544317 3291.958393 5371.004001 3922.609426 3501.110112 3375.610777 3457.090462 1.190787678 1.067367441 1.103196307 1.293152252 0.952233802 1.553619745 1.134656287 1.01273315 0.976431139 1 11.75534264 -7.716219414 4.476293463 0.993378562 1.189007519 0.255678421 0.149491123 0.289088051 12.38347124 0.07665998 0.040597023 1.92E-08 7.716219414 0.195628957 SSGSPYGGGYGSGGGSGGYGSR ddPTM_A459_MK2206_30min_R1 4 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ;;; 276.34 1.64E-65 9933700 1914.3 2528.61 2228.52 1844.32 1802.04 1643.55 1803.82 1855.25 1808.98 1966.26 FALSE TRUE 1751.478733 2363.997029 2077.254271 1986.369846 1730.260931 1736.606381 1683.490459 1839.029745 1997.029944 2209.855133 0.792576267 1.069752037 0.939995677 0.898868806 0.782974823 0.785846255 0.761810326 0.832194707 0.903692697 1 11.10973608 -6.016758123 3.959433001 0.829122016 0.945708597 0.151303812 0.090729652 0.304342025 10.75689868 0.026157569 0.037108471 9.62E-07 6.016758123 0.116586581 SSGSSSSGLGTVSNS(ph)PASQR ddPTM_A459_MK2206_30min_R1 2 SSGSSSSGLGTVSNSPASQR 20 0 Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y3N9;Q9UPP1-5;H0Y589 Q9UPP1-4 PHF8 Histone lysine demethylase PHF8 1 SSGSSSSGLGT(0.003)VS(0.001)NS(0.996)PASQR;SSGSSSSGLGTVSNS(1)PASQR 304.29 6.48E-101 16659100 3872.9 3812.1 3515.6 2871.7 3709.9 3565.6 3895.7 3532.1 2811.8 2949.3 TRUE FALSE 3543.489518 3563.931597 3276.970867 3092.878832 3562.126827 3767.481191 3635.824961 3501.219222 3104.096672 3314.68155 1.069028642 1.075195775 0.988623135 0.933084758 1.074651297 1.136604266 1.096885148 1.056276197 0.936469047 1 11.69465456 -8.248761605 24.07592235 0.968234529 1.053203073 0.276211172 0.055393638 614.2461121 1166502.66 0.042844513 0.015921209 5.64E-09 8.248761605 0.084968544 SSGSSSSGLGTVSNS(ph)PASQR ddPTM_A459_MK2206_30min_R2 2 SSGSSSSGLGTVSNSPASQR 20 0 Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y3N9;Q9UPP1-5;H0Y589 Q9UPP1-4 PHF8 Histone lysine demethylase PHF8 1 SSGSSSSGLGTVSNS(1)PASQR;SSGSSSSGLGTVS(0.001)NS(0.971)PAS(0.028)QR 250.64 5.26E-38 26027000 33134 35878 26360 30248 33785 32952 45327 40053 28648 44286 TRUE FALSE 35670.76452 34096.35069 27238.82924 27776.64164 32458.43114 34206.01145 39375.51045 45288.06462 31139.75126 42840.95145 0.832632407 0.7958822 0.635812892 0.648366591 0.757649633 0.798441918 0.91910915 1.057120888 0.726868807 1 15.3867029 -7.086704018 2.488165722 0.931688218 0.727581793 0.466648296 0.096754215 0.265390332 3.226708263 0.042211384 0.031729826 8.19E-08 7.086704018 -0.204106425 SSGTAS(ph)SVAFTPLQGLEIVNPQAAEKK ddPTM_A459_MK2206_30min_R1 2 SSGTASSVAFTPLQGLEIVNPQAAEKK 27 1 E7EVX8;Q8WWY3 E7EVX8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 1 S(0.11)S(0.11)GT(0.124)AS(0.465)S(0.159)VAFT(0.032)PLQGLEIVNPQAAEKK;S(0.099)S(0.113)GT(0.113)AS(0.521)S(0.152)VAFT(0.002)PLQGLEIVNPQAAEKK 87.357 2.52E-05 10894700 3017 2931 2745.5 3117.1 3166.2 2680.2 2753.4 3212.3 2171.81 1705.75 TRUE FALSE 2760.388307 2740.191367 2559.143109 3357.179582 3040.083549 2831.950608 2569.72571 3184.2152 2397.577421 1917.071188 1.439898698 1.429363388 1.334923359 1.751202357 1.585795858 1.477227672 1.340443551 1.660979112 1.250646005 1 10.9046882 -8.522634367 4.94568162 1.000379204 1.498244949 0.619516144 0.1259858 0.098716711 9.361535404 0.124408425 0.032372355 3.00E-09 8.522634367 0.497865745 SSGTPGCSSGTERPQS(ph)PGSSK ddPTM_A459_MK2206_30min_R1 2 SSGTPGCSSGTERPQSPGSSK 21 1 Q8IYD8-2;Q8IYD8-3;Q8IYD8 Q8IYD8-2 FANCM Fanconi anemia group M protein 1 SSGT(0.01)PGCS(0.014)S(0.01)GT(0.029)ERPQS(0.856)PGS(0.057)S(0.024)K;SSGTPGCS(0.017)S(0.014)GT(0.035)ERPQS(0.933)PGS(0.001)S(0.001)K 91.503 0.0003619 22204000 3235.6 2998.8 3377.2 2545.2 2991.1 2648.2 2892.5 2786.5 2537.5 2590.6 TRUE FALSE 2960.395229 2803.577575 3147.965073 2741.231745 2871.958153 2798.138795 2699.546603 2762.137924 2801.282206 2911.543086 1.016778781 0.962918113 1.08120161 0.941504784 0.98640414 0.961050107 0.927187585 0.948685231 0.962129745 1 11.50756825 -5.810071988 24.99999907 0.958508795 1.014562345 0.397083712 0.033164382 110.7049239 56908.21544 0.009033453 0.013398808 1.55E-06 5.810071988 0.05605355 SSGTPGCSSGTERPQS(ph)PGSSK ddPTM_A459_MK2206_30min_R2 2 SSGTPGCSSGTERPQSPGSSK 21 1 Q8IYD8-2;Q8IYD8-3;Q8IYD8 Q8IYD8-2 FANCM Fanconi anemia group M protein 1 SSGTPGCS(0.016)S(0.004)GT(0.001)ERPQS(0.728)PGS(0.185)S(0.066)K;SSGTPGCS(0.012)S(0.012)GT(0.016)ERPQS(0.945)PGS(0.011)S(0.003)K 78.098 0.0013586 22550000 31647 37070 31899 36697 40747 31576 43053 32295 33367 36708 TRUE FALSE 34069.91865 35229.1577 32962.49674 33698.73771 39147.06804 32777.64681 37400.08938 36516.06739 36269.20135 35510.22097 0.959439782 0.992085004 0.928253777 0.94898699 1.102416909 0.923048236 1.053220407 1.028325547 1.021373575 1 15.11594672 SSGVVPQS(ph)APPVPTASSR ddPTM_A459_MK2206_30min_R1 2 SSGVVPQSAPPVPTASSR 18 0 P41162 P41162 ETV3 ETS translocation variant 3 1 SSGVVPQS(1)APPVPTASSR;SSGVVPQS(1)APPVPTASSR 191.97 2.46E-10 18828600 12092.3 12130.4 10352.1 11967.1 13523.9 10916.2 10852.7 10264.5 8580.1 7140.8 TRUE FALSE 11063.78639 11340.70876 9649.428295 12888.80812 12985.21443 11534.26581 10128.73618 10174.75856 9472.032099 8025.456214 1.378586599 1.413092097 1.202352619 1.605990709 1.618003273 1.437209986 1.262076063 1.267810613 1.18024843 1 12.97036769 -8.126655368 0.985982171 1.020587677 1.440455163 0.594537828 0.116641501 0.397483036 0.755251308 0.119739051 0.042972691 7.47E-09 8.126655368 0.419867486 SSGVVPQS(ph)APPVPTASSR ddPTM_A459_MK2206_30min_R2 3 SSGVVPQSAPPVPTASSR 18 0 P41162 P41162 ETV3 ETS translocation variant 3 1 SSGVVPQS(0.963)APPVPT(0.006)AS(0.026)S(0.006)R;SSGVVPQS(0.999)APPVPT(0.001)ASSR;SSGVVPQS(1)APPVPTASSR 127.37 0.0007316 23132100 79870 124514 120032 102719 99975 96881 64018 62920 73033 74543 TRUE FALSE 85984.90861 118330.8158 124033.807 94326.52912 96049.47917 100567.8743 55612.3597 71143.86004 79385.27833 72110.66801 1.192402053 1.640961304 1.720047954 1.30808009 1.331973227 1.394632405 0.771208494 0.986592719 1.100881194 1 16.13792509 -7.166754601 6.016475225 0.965007174 1.448289223 0.660279108 0.163947575 0.149543567 7.790166935 0.066783859 0.051486675 6.81E-08 7.166754601 0.483282049 SSHCDS(ph)PPR ddPTM_A459_MK2206_30min_R2 1 SSHCDSPPR 9 0 F6RP06;A0A0J9YW18;Q12983 F6RP06 BNIP3 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 1 SSHCDS(1)PPR 107.03 0.008485 2028900 4473.5 5981.9 4955.5 9636.1 7675.4 10692 9344.6 7092.9 11632 6844.4 TRUE FALSE 4815.9946 5684.847544 5120.713897 8848.799806 7374.02523 11098.89155 8117.642795 8019.966384 12643.73033 6621.067789 0.727374308 0.85859981 0.77339699 1.33646114 1.113721452 1.676299338 1.226032274 1.211279908 1.909621037 1 12.69284819 -5.771021607 7.752435115 1.361190934 0.792574137 0.51229354 0.253382122 0.103587829 39.10130581 0.068158914 0.106960049 1.69E-06 5.771021607 -0.568616798 SSHYDELLAAEAR ddPTM_A459_MK2206_30min_R1 2 SSHYDELLAAEAR 13 0 Q7KZF4;H7C597 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 0 ; 164.13 0.00050975 15344400 7507.2 5256.6 5900.6 4773.8 8795.5 7734.9 9002.7 7300.7 4223 4894.3 FALSE TRUE 6868.673218 4914.394385 5500.083712 5141.478903 8445.15661 8172.843354 8402.146309 7236.87075 4661.995962 5500.642834 1.248703729 0.89342183 0.999898353 0.934705099 1.535303575 1.48579786 1.527484435 1.315640911 0.84753657 1 12.42538451 -6.244842187 24.63939668 1.323210672 1.008821926 0.236179063 0.228115653 896.1531482 1330385.374 0.069096069 0.088932189 5.69E-07 6.244842187 -0.314388746 SSHYDELLAAEAR ddPTM_A459_MK2206_30min_R2 1 SSHYDELLAAEAR 13 0 Q7KZF4;H7C597 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 0 144.51 0.0016005 0 13895 25060 24811 33176 21706 28926 31117 26584 29514 20782 FALSE TRUE 14958.81188 23815.55684 25638.18636 30465.41468 20853.71338 30026.7992 27031.30052 30058.62008 32081.07437 20103.88504 0.744075678 1.184624603 1.275285165 1.515399367 1.037297683 1.493581919 1.344580934 1.495164741 1.595764913 1 14.29518671 -4.465741191 1.336067943 1.369372636 3.65E-17 0.478312889 0.188836609 2.245009596 2.058182218 0.05281701 5.115636939 3.42E-05 4.465741191 -1.369372636 SSIETKPDAS(ph)PQLPK ddPTM_A459_MK2206_30min_R2 3 SSIETKPDASPQLPK 15 1 E9PRD6;A0A024R3M2;A0A2R8Y5X2;J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37-2;Q3KR37;Q3KR37-4 E9PRD6 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 S(0.005)S(0.005)IET(0.081)KPDAS(0.91)PQLPK;SSIETKPDAS(0.999)PQLPK;SSIETKPDAS(1)PQLPK 140.93 0.0018396 38867800 255797 118014.1 159742.5 123079.8 96809.6 123381.3 265915 115423 166105 153160 TRUE FALSE 275381.015 112153.6914 165068.2352 113023.7866 93008.36867 128076.6618 231000.0411 130509.1824 180552.5127 148162.4017 1.858643028 0.756964588 1.114103398 0.762837166 0.627746092 0.864434299 1.559100273 0.880852233 1.218612216 1 17.17681986 SSINSVDGES(ph)PNGSSDR ddPTM_A459_MK2206_30min_R1 2 SSINSVDGESPNGSSDR 17 0 E9PGE5;Q9NUY8-2;Q9NUY8 E9PGE5 TBC1D23 TBC1 domain family member 23 1 SSINSVDGES(1)PNGSSDR;SSINSVDGES(1)PNGSSDR 305.64 7.94E-90 14540300 4166.5 4250.2 3874.1 3630.3 4616.4 3842 4543.7 4392.6 3306.2 3521.4 TRUE FALSE 3812.117296 3973.511207 3611.136886 3909.906335 4432.519013 4059.53072 4240.598063 4354.195961 3649.891321 3957.657617 0.963225641 1.004005801 0.912442974 0.987934459 1.119985466 1.025740757 1.071491896 1.100195212 0.92223524 1 11.95043109 -6.014331512 24.65477781 1.046558801 0.961950535 0.296201227 0.055828962 632.0341298 1087302.923 0.015678465 0.021088579 9.68E-07 6.014331512 -0.084608265 SSINSVDGES(ph)PNGSSDR ddPTM_A459_MK2206_30min_R2 4 SSINSVDGESPNGSSDR 17 0 E9PGE5;Q9NUY8-2;Q9NUY8 E9PGE5 TBC1D23 TBC1 domain family member 23 1 SSINSVDGES(1)PNGSSDR;SSINS(0.004)VDGES(0.925)PNGS(0.058)S(0.014)DR;SSINS(0.006)VDGES(0.983)PNGS(0.009)S(0.002)DR;SSINSVDGES(1)PNGSSDR 289.81 1.01E-75 83038200 101406 131301 124044 145811 130829 127828 144510 104202 131509 132481 TRUE FALSE 109169.7213 124780.7833 128179.565 133897.7749 125691.9961 132692.5841 125535.6634 117821.5592 142947.4151 128158.1558 0.851835926 0.973646839 1.000167053 1.044785437 0.980756904 1.035381504 0.979537062 0.919344995 1.115398503 1 16.96756577 -4.719811673 2.354082951 1.006497422 0.798303631 0.489682554 0.048203913 0.613802818 3.567815165 0.012077943 0.282016704 1.91E-05 4.719811673 -0.208193791 SSISGS(ph)LPSSGSLQAVSSR ddPTM_A459_MK2206_30min_R1 1 SSISGSLPSSGSLQAVSSR 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 SSIS(0.069)GS(0.675)LPS(0.198)S(0.058)GSLQAVSSR 261.66 2.05E-47 8992400 1804.7 1526.8 1158.4 845.57 1351.2 1364.6 1827.9 1905.8 2354.6 1964.8 TRUE FALSE 1651.200788 1427.405042 1079.771035 910.6959479 1297.378843 1441.862473 1705.964126 1889.137792 2599.369096 2208.214257 0.747753884 0.64640695 0.488979288 0.412412856 0.587523986 0.652954064 0.772553714 0.855504752 1.177136271 1 11.10866444 -7.713085806 1.347430194 1.08108358 0.57190347 0.789602956 0.100777797 0.207089544 0.69646227 0.086723502 0.03480658 1.94E-08 7.713085806 -0.50918011 SSISGS(ph)LPSSGSLQAVSSR ddPTM_A459_MK2206_30min_R2 2 SSISGSLPSSGSLQAVSSR 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 SSISGS(0.748)LPS(0.199)S(0.053)GSLQAVSSR;SSIS(0.225)GS(0.751)LPS(0.018)S(0.005)GSLQAVSSR 225.86 9.57E-21 9764400 25247 24708 16998.3 22991 24817 28237 35034 25854 35198 38449 TRUE FALSE 27179.92973 23481.03665 17565.01484 21112.56176 23842.55988 29311.57882 30433.99372 29233.20657 38259.45842 37194.41228 0.730753037 0.631305489 0.472248754 0.567627245 0.641025316 0.78806404 0.818241017 0.785956943 1.028634574 1 15.18279828 -7.48880293 0.778791339 1.003249928 0.590917107 0.780295649 0.079011336 0.320726843 0.367263614 0.073726818 0.03892098 3.24E-08 7.48880293 -0.412332821 SSKPEGEAGRS(ph)PGEADEGR ddPTM_A459_MK2206_30min_R1 2 SSKPEGEAGRSPGEADEGR 19 2 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 SSKPEGEAGRS(1)PGEADEGR;SSKPEGEAGRS(1)PGEADEGR 105.57 0.0009702 16909200 2785.4 2381.8 2593.2 2752.07 2792 2386.9 2254.1 2725.1 2190.91 1669.14 TRUE FALSE 2548.487103 2226.744387 2417.180809 2964.034908 2680.788728 2522.044215 2103.733102 2701.274738 2418.662935 1875.925665 1.358522436 1.187010994 1.288526968 1.580038572 1.429048484 1.344426521 1.121437348 1.439968965 1.289317045 1 10.87338695 -7.026265301 23.51414154 1.247000171 1.367924714 0.200780282 0.14270717 763.878052 683862.4691 0.05637232 0.043855348 9.41E-08 7.026265301 0.120924542 SSLAETLDSTGS(ph)LDPQR ddPTM_A459_MK2206_30min_R1 2 SSLAETLDSTGSLDPQR 17 0 Q9UGH3-2;Q9UGH3 Q9UGH3-2 SLC23A2 Solute carrier family 23 member 2 1 SSLAETLDST(0.005)GS(0.995)LDPQR;SSLAETLDS(0.002)T(0.037)GS(0.962)LDPQR 172.42 5.57E-07 9923900 2269.9 2705.5 2172.93 2083.48 3256.8 2449.7 2960.4 2331.1 2744.7 2245.2 TRUE FALSE 2076.833085 2529.371458 2025.437566 2243.949991 3127.07476 2588.399897 2762.917118 2310.719438 3030.021387 2523.352326 0.823045226 1.002385371 0.802677274 0.889273356 1.239254117 1.025778236 1.094939097 0.915733968 1.20079204 1 11.30112594 -6.13410058 10.57611398 1.073230611 0.88164307 0.487021775 0.100488757 0.379587732 30.57776688 0.028315947 0.036579073 7.34E-07 6.13410058 -0.191587541 SSLAETLDSTGS(ph)LDPQR ddPTM_A459_MK2206_30min_R2 2 SSLAETLDSTGSLDPQR 17 0 Q9UGH3-2;Q9UGH3 Q9UGH3-2 SLC23A2 Solute carrier family 23 member 2 1 SSLAETLDS(0.001)T(0.211)GS(0.788)LDPQR;SSLAETLDS(0.106)T(0.106)GS(0.788)LDPQR 176.08 9.51E-08 7067500 14284.6 14571.8 13122.1 16718.2 16489 14618.1 15458.3 10707.2 17062.4 10916.7 TRUE FALSE 15378.23996 13848.1856 13559.58426 15352.26958 15841.55901 15174.40204 13428.60664 12106.6678 18546.45671 10560.48897 1.456205295 1.311320493 1.283992086 1.453746093 1.500078173 1.436903355 1.271589476 1.14641167 1.756211929 1 13.36638902 -11.07250036 2.977047755 0.982240963 1.389806384 0.367657741 0.157385212 21739256.63 23887408.59 3088638.69 0.037766453 8.46E-12 11.07250036 0.407565421 SSLFS(ph)PR ddPTM_A459_MK2206_30min_R1 3 SSLFSPR 7 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 SSLFS(1)PR;SSLFS(1)PR;SSLFS(1)PR 104.01 0.018263 47725800 12953.8 12827.6 12474.1 11040 12783.6 11855.7 12467.3 11010.3 11623.9 11327.9 TRUE FALSE 11852.01129 11992.52091 11627.39285 11890.30271 12274.40214 12526.95949 11635.62916 10914.03811 12832.246 12731.28577 0.930935924 0.941972486 0.913292895 0.933943588 0.964113316 0.983950852 0.913939831 0.857261262 1.007930089 1 13.63609051 -7.282061043 0.005958611 1.886945147 1.42E-06 0.138395845 0.040315752 12534.28082 45.55298973 7145.736561 7276.204237 5.22E-08 7.282061043 -1.886943725 SSLFS(ph)PR ddPTM_A459_MK2206_30min_R2 5 SSLFSPR 7 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 SSLFS(1)PR;SSLFS(1)PR;SSLFS(1)PR;SSLFS(1)PR;SS(0.001)LFS(0.999)PR 112.41 0.014575 76247200 137956 149818 129511 154988 153587 136101 150483 122255 119495 143810 TRUE FALSE 148518.0174 142378.256 133828.8321 142324.9846 147556.4027 141280.4189 130724.4013 138234.1483 129888.4591 139117.4915 1.067572567 1.023438925 0.961984224 1.023056002 1.060660317 1.015547487 0.939669052 0.99365038 0.933660158 1 17.0859443 -7.142248437 6.230387019 0.966473456 1.024575333 0.435962983 0.032786057 0.246005953 11.61405208 0.012911865 0.009977339 7.21E-08 7.142248437 0.058101877 SSLGQS(ph)ASETEEDTVSVSK ddPTM_A459_MK2206_30min_R1 2 SSLGQSASETEEDTVSVSK 19 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 S(0.099)S(0.099)LGQS(0.79)AS(0.013)ETEEDTVSVSK;S(0.02)S(0.02)LGQS(0.959)ASETEEDTVSVSK 219.99 3.12E-19 23876000 2087.45 3267.5 3394.5 2564.82 2035.38 1773.96 2322.67 2410 3360.1 3227.2 TRUE FALSE 1909.901416 3054.785156 3164.090798 2762.362881 1954.306505 1874.400082 2167.728922 2388.929624 3709.394419 3627.0099 0.526577393 0.842232373 0.872368944 0.761608862 0.538820284 0.516789348 0.597662808 0.658649877 1.02271417 1 11.82456497 -8.261348901 24.86628024 1.011357134 0.669120403 0.56899941 0.120750574 6.078264161 1671911.632 0.106861884 0.034432971 5.48E-09 8.261348901 -0.342236731 SSLGQS(ph)ASETEEDTVSVSK ddPTM_A459_MK2206_30min_R2 1 SSLGQSASETEEDTVSVSK 19 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 S(0.007)S(0.007)LGQS(0.983)AS(0.003)ETEEDT(0.001)VSVSK 171.39 2.94E-09 7009300 27107 27724 36269 31339 28998 25036 28104 25678 21698 32978 TRUE FALSE 29182.33276 26347.26647 37478.19036 28778.50345 27859.39282 25988.76252 24413.91104 29034.20277 23585.25282 31901.93056 0.91475131 0.825883137 1.174793804 0.90209285 0.873282348 0.814645448 0.765280051 0.910108017 0.739304876 1 14.96135611 -6.181442853 3.497366164 0.8387649 0.966120066 0.191061606 0.107426983 0.376240493 8.883275197 0.03253682 0.042602168 6.59E-07 6.181442853 0.127355166 SSLGQS(ph)ASETEEDTVSVSKK ddPTM_A459_MK2206_30min_R1 1 SSLGQSASETEEDTVSVSKK 20 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 S(0.009)S(0.009)LGQS(0.602)AS(0.096)ET(0.23)EEDT(0.048)VS(0.003)VS(0.003)KK 65.278 0.0087525 22684000 1462.3 1798 1733.3 1959.5 1616.2 1490.1 1521.6 1733.9 1588.8 1937.6 TRUE FALSE 1337.923706 1680.949873 1615.648425 2110.42103 1551.823332 1574.468174 1420.09684 1718.740695 1753.961446 2177.644516 0.614390318 0.771911972 0.741924778 0.969130184 0.712615544 0.723014322 0.652125188 0.789265963 0.805439746 1 11.08855275 -8.771105255 1.794736953 0.99958432 0.749476597 0.420957934 0.089373104 0.983995128 5.283319952 0.088277357 0.02483993 1.69E-09 8.771105255 -0.250107724 SSLGQS(ph)ASETEEDTVSVSKK ddPTM_A459_MK2206_30min_R2 3 SSLGQSASETEEDTVSVSKK 20 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 S(0.003)S(0.003)LGQS(0.948)AS(0.045)ET(0.002)EEDTVSVSKK;S(0.001)S(0.001)LGQS(0.437)AS(0.437)ET(0.123)EEDTVSVSKK;S(0.003)S(0.003)LGQS(0.936)AS(0.055)ET(0.003)EEDTVSVSKK 136.77 5.11E-05 60726000 94167 187563 150208 174057 188938 148532 182936 135302 169714 154332 TRUE FALSE 101376.4979 178248.8942 155215.8598 159835.9863 181519.3448 154184.4893 158916.2835 152986.436 184475.4169 149296.1595 0.679029509 1.193928195 1.03965072 1.070596771 1.215833987 1.032742502 1.064436513 1.024717826 1.235634042 1 17.18781753 -4.753153258 24.99904826 1.096268752 0.679028737 0.703073525 0.081582282 164.6346429 496660.8263 0.019242166 0.212828319 1.77E-05 4.753153258 -0.417240015 SSLGQSAS(ph)ETEEDTVSVSK ddPTM_A459_MK2206_30min_R1 5 SSLGQSASETEEDTVSVSK 19 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 SSLGQS(0.051)AS(0.888)ET(0.002)EEDT(0.058)VSVSK;SSLGQS(0.021)AS(0.94)ET(0.038)EEDTVSVSK;SSLGQS(0.002)AS(0.724)ET(0.017)EEDT(0.245)VS(0.012)VS(0.001)K;SSLGQS(0.021)AS(0.975)ETEEDT(0.003)VSVSK;SSLGQSAS(0.998)ET(0.002)EEDTVSVSK 272.3 7.60E-59 61129200 13663.78 15213.59 15232.93 13492.8 13184.66 12834.16 15019.91 12894.08 15607.32 15948.81 TRUE FALSE 12501.60376 14223.18253 14198.96115 14532.01779 12659.48707 13560.81905 14017.95921 12781.34842 17229.75677 17924.66899 0.69745242 0.793497639 0.792146352 0.810727261 0.706260578 0.756545019 0.782048428 0.713059104 0.961231517 1 14.12965886 -8.330260133 5.382695807 0.991584783 0.759980952 0.844769567 0.038456257 0.082100213 4.407702778 0.036345287 0.009590595 4.67E-09 8.330260133 -0.231603831 SSLGQSAS(ph)ETEEDTVSVSK ddPTM_A459_MK2206_30min_R2 5 SSLGQSASETEEDTVSVSK 19 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 SSLGQS(0.194)AS(0.799)ET(0.005)EEDT(0.003)VSVSK;SSLGQS(0.002)AS(0.962)ET(0.018)EEDT(0.018)VSVSK;SSLGQSAS(0.817)ET(0.007)EEDT(0.175)VS(0.001)VSK;SSLGQS(0.025)AS(0.967)ET(0.002)EEDT(0.006)VSVSK;SSLGQS(0.001)AS(0.84)ET(0.003)EEDT(0.152)VS(0.004)VSK 191.89 2.68E-15 105780800 572981 596948 583362 606975 539169 513298 647635 492677 452608 587971 TRUE FALSE 616848.8659 567304.4304 602810.9979 557383.2009 517998.516 532831.9151 562599.7466 557071.5755 491975.0257 568785.5544 1.084501639 0.997395989 1.059821216 0.979953159 0.91070969 0.936788761 0.989124534 0.979405281 0.864956963 1 19.1175253 -5.921530791 4.482681371 0.947141001 1.041611576 0.526149697 0.042423126 0.172293841 6.493406859 0.011947446 0.018071616 1.20E-06 5.921530791 0.094470575 SSLGQSAS(ph)ETEEDTVSVSKK ddPTM_A459_MK2206_30min_R1 3 SSLGQSASETEEDTVSVSKK 20 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 SSLGQS(0.173)AS(0.735)ET(0.091)EEDTVSVSKK;S(0.001)S(0.001)LGQS(0.273)AS(0.635)ET(0.091)EEDTVSVSKK;SSLGQS(0.022)AS(0.97)ET(0.009)EEDTVSVSKK 162.01 3.15E-07 83514500 9778.9 10407.9 10793.6 9109.7 9609.8 7968.7 7413.4 9813.3 7290 6444.3 TRUE FALSE 8947.153204 9730.343818 10060.9605 9811.330672 9227.021317 8419.880908 6918.865613 9727.503353 8047.821588 7242.668536 1.235339317 1.34347496 1.389123422 1.354656868 1.273980891 1.162538485 0.955292318 1.343082775 1.11116801 1 12.82230564 -6.70395914 3.072503682 1.122853054 1.333626261 0.505018149 0.102871832 0.226422431 4.346788328 0.036905116 0.035498293 1.98E-07 6.70395914 0.210773207 SSLGQSAS(ph)ETEEDTVSVSKK ddPTM_A459_MK2206_30min_R2 3 SSLGQSASETEEDTVSVSKK 20 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 SSLGQS(0.027)AS(0.705)ET(0.267)EEDTVSVSKK;S(0.001)S(0.001)LGQS(0.331)AS(0.632)ET(0.032)EEDT(0.002)VSVSKK;S(0.01)S(0.01)LGQS(0.293)AS(0.364)ET(0.323)EEDT(0.001)VSVSKK 86.508 0.0011606 114785000 55935 103103 86991 100810 111572 81099 99576 68178 86784 86692 TRUE FALSE 60217.42661 97983.05495 89891.23652 92573.50052 107191.1227 84185.27927 86501.55159 77089.09869 94332.31545 83863.24714 0.718043108 1.168367053 1.071878798 1.103862582 1.278165661 1.003839967 1.031459603 0.919223871 1.124834998 1 16.35575107 -10.52612263 14.68575891 1.000010505 1.053994837 0.007107156 0.143251054 0 0 0.135719575 0.032916832 2.98E-11 10.52612263 0.053984332 SSLGQSASETEEDT(ph)VSVSK ddPTM_A459_MK2206_30min_R1 1 SSLGQSASETEEDTVSVSK 19 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 SSLGQSAS(0.061)ET(0.019)EEDT(0.911)VS(0.008)VS(0.001)K 164.92 3.17E-07 26104000 2834.1 2986.7 3009.9 2487.3 2879.7 2472.1 2702.8 2505.5 2742.7 3271.5 TRUE FALSE 2593.044913 2792.265287 2805.596374 2678.872277 2764.995451 2612.068166 2522.501144 2483.594678 3027.81348 3676.798119 0.705245387 0.759428502 0.763054235 0.728588351 0.752011767 0.710419251 0.686059191 0.675477575 0.823491903 1 11.84423425 -8.583710756 4.050478295 0.99987405 0.725274624 0.899940013 0.028426396 0.090020634 4.239640774 0.030422263 0.007965998 2.61E-09 8.583710756 -0.274599425 SSLGQSASETEEDT(ph)VSVSK ddPTM_A459_MK2206_30min_R2 3 SSLGQSASETEEDTVSVSK 19 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 SSLGQS(0.001)AS(0.001)ETEEDT(0.934)VS(0.062)VS(0.001)K;SSLGQS(0.001)AS(0.215)ET(0.004)EEDT(0.749)VS(0.031)VSK;SSLGQSASETEEDT(0.962)VS(0.036)VS(0.001)K 175.88 2.14E-12 41857600 291347.2 318168.8 307741 319116 301887.7 266958.2 306095.3 267966.2 252722.7 291237 TRUE FALSE 313652.9656 302369.0001 318000.9313 293043.202 290034.072 277117.4814 265904.6194 302990.3024 274704.0636 281733.9605 1.113294844 1.073242997 1.128727721 1.040141563 1.029460813 0.983614048 0.943814579 1.075448277 0.975047748 1 18.10397395 -6.079148343 2.04675582 0.999132687 1.1019936 0.628328794 0.035458738 0.216219187 1.795904354 0.011460047 0.017030646 8.33E-07 6.079148343 0.102860913 SSLGS(ph)LQTPEAVTTR ddPTM_A459_MK2206_30min_R1 1 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.059)S(0.001)LGS(0.852)LQT(0.052)PEAVT(0.029)T(0.009)R 204.9 4.95E-06 8685400 1582.4 1768.2 1166.2 1056.4 1619.2 1285.8 1572.7 1326.9 992.99 1353.8 TRUE FALSE 1447.80857 1653.089859 1087.041593 1137.764111 1554.703835 1358.600885 1467.788053 1315.299053 1096.214864 1521.518965 0.951554732 1.086473384 0.714444985 0.747781748 1.021810356 0.892924056 0.964686006 0.864464449 0.720474006 1 10.5712966 -7.991224988 24.27818148 0.837647747 0.908271823 0.026153196 0.123835442 439.0855676 1214835.844 0.069599051 0.033347508 1.02E-08 7.991224988 0.070624076 SSLGSLQT(ph)PEAVTTR ddPTM_A459_MK2206_30min_R1 2 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SSLGS(0.265)LQT(0.733)PEAVT(0.002)TR;S(0.001)SLGS(0.025)LQT(0.974)PEAVTTR 230.48 1.59E-13 23214000 4791.1 4342 3624.8 3136.4 3605.1 3202.8 3795.6 3381.4 3624.5 3495.9 TRUE FALSE 4383.591786 4059.335011 3378.758675 3377.966071 3461.501233 3384.139768 3542.402449 3351.836776 4001.279745 3928.998485 1.115702081 1.033172964 0.859954181 0.85975245 0.881013634 0.861323765 0.901604433 0.853102079 1.018396867 1 11.9399459 -5.077898398 3.527430968 0.895398125 1.104981143 0.599196146 0.05691298 0.140659975 3.254134264 0.014171043 0.050864206 8.36E-06 5.077898398 0.209583019 SSLGSLQT(ph)PEAVTTR ddPTM_A459_MK2206_30min_R2 2 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SSLGSLQT(0.956)PEAVT(0.044)TR;S(0.156)S(0.008)LGS(0.003)LQT(0.782)PEAVT(0.039)T(0.012)R 181.86 4.80E-05 34197000 48514 45028 44154 50714 54753 46651 46736 37626 38458 44088 TRUE FALSE 52228.26914 42791.975 45626.07232 46570.50397 52603.12211 48426.33649 40599.50706 42543.84739 41803.00732 42649.41217 1.224595287 1.003342668 1.069793697 1.091937769 1.233384458 1.135451441 0.951935912 0.997524824 0.980154361 1 15.38023824 -7.257340644 24.98672711 0.982197507 1.121544302 0.539770697 0.065053232 304.5587834 1856659.454 0.026729545 0.019932632 5.53E-08 7.257340644 0.139346795 SSLGSLQTPEAVT(ph)TR ddPTM_A459_MK2206_30min_R1 1 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.003)SLGS(0.001)LQT(0.035)PEAVT(0.926)T(0.035)R 183.75 4.47E-05 9458500 5908.8 4808.5 4020.5 3542.4 5227.7 4737.3 5289.4 4426.8 3560.9 3441.7 TRUE FALSE 5406.225532 4495.465776 3747.599662 3815.236262 5019.469639 5005.521832 4936.553777 4388.096954 3931.068298 3868.08378 1.397649544 1.162194521 0.96885173 0.986337546 1.297663113 1.294057243 1.276227212 1.134436895 1.016283132 1 11.91740333 -8.186181409 3.466875951 1.003293336 1.187639474 0.250412971 0.128439756 0.402752995 8.887543125 0.117242305 0.037184494 6.51E-09 8.186181409 0.184346137 SSLNSSPWS(ph)GLMALGNSR ddPTM_A459_MK2206_30min_R2 1 SSLNSSPWSGLMALGNSR 18 0 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 1 SSLNS(0.168)S(0.322)PWS(0.508)GLMALGNS(0.002)R 75.743 0.015181 1421400 22710 30232 22907 25582 18025 21559 25855 18557 18064 23257 TRUE FALSE 24448.69506 28730.72284 23670.70795 23491.86877 17317.24793 22379.44285 22460.20744 20982.46362 19635.17407 22498.12599 1.08669918 1.277027378 1.052119094 1.044170024 0.769719573 0.994724754 0.998314591 0.932631617 0.872747093 1 14.45751722 -5.705821474 2.239971082 0.932504483 1.17730646 0.562954211 0.084309777 0.205936119 2.099623946 0.024382754 0.048613845 1.97E-06 5.705821474 0.244801977 SSLS(ph)GDEEDELFK ddPTM_A459_MK2206_30min_R1 2 SSLSGDEEDELFK 13 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 SS(0.026)LS(0.974)GDEEDELFK;SS(0.002)LS(0.998)GDEEDELFK 181.76 0.00011588 8190500 2318.6 2549.1 2929.1 2172.6 1895.56 1876.1 2559.6 2167.54 2102.76 2184.63 TRUE FALSE 2121.390895 2383.153127 2730.280853 2339.934028 1820.055831 1982.323161 2388.853754 2148.589426 2321.349427 2455.278458 0.864012344 0.970624378 1.112004565 0.953021854 0.741282858 0.807372033 0.972946163 0.875089919 0.94545261 1 11.26167094 -6.011974903 24.67425194 0.880733796 0.989631222 0.170835676 0.091045613 755.3735899 1556450.098 0.027246238 0.037271308 9.73E-07 6.011974903 0.108897426 SSLS(ph)GDEEDELFK ddPTM_A459_MK2206_30min_R2 2 SSLSGDEEDELFK 13 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 S(0.023)S(0.024)LS(0.953)GDEEDELFK;SS(0.002)LS(0.997)GDEEDELFK 173.59 0.00014551 4970000 20657.9 17835.9 21416.3 17849.2 21148 17316.2 24142 16049.1 16076.7 21720.2 TRUE FALSE 22239.48471 16950.19514 22130.30875 16390.86326 20317.62326 17975.18013 20972.1264 18146.77247 17475.02231 21011.47165 1.058444885 0.806711468 1.053248869 0.780091158 0.966977639 0.855493629 0.998127439 0.863660232 0.831689593 1 14.35888959 -4.73403541 24.52692797 0.90579998 1.058445902 0.210306763 0.088488401 3578.235349 3202354.263 0.020062414 1.77994024 1.84E-05 4.73403541 0.152645922 SSLSNNECGSLDKT(ph)SPEMSNSNNDER ddPTM_A459_MK2206_30min_R1 2 SSLSNNECGSLDKTSPEMSNSNNDER 26 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SSLSNNECGS(0.001)LDKT(0.761)S(0.231)PEMS(0.006)NSNNDER;SSLSNNECGS(0.003)LDKT(0.738)S(0.255)PEMS(0.004)NSNNDER 147.08 1.28E-10 30454000 3032 3087 2774.6 2888.8 2502.9 2801.8 2284.4 2694.1 2586.6 2534 TRUE FALSE 2774.112478 2886.035739 2586.267882 3111.295877 2403.204193 2960.435495 2132.011844 2670.545768 2855.486326 2847.931051 0.97407993 1.013379779 0.908121663 1.092475843 0.843842126 1.039503921 0.748617788 0.937714334 1.0026529 1 11.4756985 -6.272994285 24.97839986 0.92214147 0.991833798 0.118261347 0.08984305 1584.655919 3425566.574 0.026854221 0.030720962 5.33E-07 6.272994285 0.069692328 SSLSNNECGSLDKT(ph)SPEMSNSNNDER ddPTM_A459_MK2206_30min_R2 2 SSLSNNECGSLDKTSPEMSNSNNDER 26 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SSLSNNECGS(0.003)LDKT(0.773)S(0.221)PEMS(0.002)NSNNDER;SSLSNNECGS(0.005)LDKT(0.489)S(0.489)PEMS(0.016)NSNNDER 129.08 8.86E-09 27799000 63810 62178 55578 61580 76337 54245 86496 59982 46095 76899 TRUE FALSE 68695.34266 59090.33094 57430.94278 56548.71702 73339.62582 56309.33149 75138.9713 67821.85335 50104.25978 74389.79193 0.923451201 0.794333865 0.7720272 0.7601677 0.985882927 0.756949711 1.010070997 0.911709142 0.673536765 1 16.18281704 -6.23156398 24.94607261 0.884658967 0.80830722 0.106620537 0.108618152 1666.053717 1391160.93 0.031330619 0.04044239 5.87E-07 6.23156398 -0.076351747 SSLSNNECGSLDKTS(ph)PEMSNSNNDER ddPTM_A459_MK2206_30min_R2 1 SSLSNNECGSLDKTSPEMSNSNNDER 26 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SSLSNNECGS(0.065)LDKT(0.138)S(0.581)PEMS(0.193)NS(0.022)NNDER 75.177 0.00010863 8129500 19511 21583 20893 23120 27338 21104 29934 20490 23105 24963 TRUE FALSE 21004.77716 20511.2196 21589.56219 21231.02204 26264.57276 21907.12751 26003.62984 23168.11335 25114.63114 24148.45935 0.869818519 0.84938005 0.894034765 0.879187435 1.087629334 0.907185307 1.076823555 0.959403373 1.040009666 1 14.55964353 -6.181931145 8.643235642 1.007739484 0.872366505 0.641687992 0.050737985 0.226637977 22.97149418 0.013813724 0.0178564 6.58E-07 6.181931145 -0.135372979 SSLSNNS(ph)LK ddPTM_A459_MK2206_30min_R2 1 SSLSNNSLK 9 0 Q9ULJ7-2;Q9ULJ7 Q9ULJ7-2 ANKRD50 Ankyrin repeat domain-containing protein 50 1 SSLS(0.036)NNS(0.964)LK 80.17 0.047087 4067800 32149 35697 29408 26198 22565 20545 31611 26054 23287 26821 TRUE FALSE 34610.35216 33924.33889 30388.44804 24057.5396 21678.98472 21326.85437 27460.43773 29459.34726 25312.46117 25945.83297 1.333946465 1.307506255 1.171226535 0.927221709 0.835547841 0.821976091 1.058375646 1.135417286 0.975588689 1 14.66321523 -5.550510171 3.00492076 0.963313273 1.31646142 0.724795263 0.089281715 0.150951214 2.768711364 0.029270717 0.061055064 2.82E-06 5.550510171 0.353148147 SSLST(ph)SSPESAR ddPTM_A459_MK2206_30min_R2 1 SSLSTSSPESAR 12 0 Q8N7B6;D6RF51;D6RGK2;D6RAM4;D6RC23;D6R9D1;D6REJ6;D6RF67;D6RF08;D6RBZ2;D6RDH3;D6REQ4;D6R9F1;D6RB63;D6RC13;Q8N7B6-2;Q8N7B6-3;Q8N7B6-4;D6R9N9 Q8N7B6 PACRGL PACRG-like protein 1 SSLS(0.013)T(0.456)S(0.313)S(0.217)PESAR 117.2 0.011283 14347000 26045 31105 25438 30898 30195 28392 32340 22707 25404 26830 TRUE FALSE 28039.02523 29560.37093 26286.09022 28373.53456 29009.39258 29472.47746 28093.71915 25674.88286 27613.594 25954.5393 1.080312962 1.138928747 1.012774294 1.093201241 1.117700154 1.135542308 1.082420259 0.989225144 1.063921562 1 14.66369926 -7.643693104 6.202310513 1.020500719 1.096373267 0.464313275 0.037916571 0.195648391 9.806460619 0.018338241 0.010423206 2.27E-08 7.643693104 0.075872549 SSLSTSS(ph)PESAR ddPTM_A459_MK2206_30min_R1 2 SSLSTSSPESAR 12 0 Q8N7B6;D6RF51;D6RGK2;D6RAM4;D6RC23;D6R9D1;D6REJ6;D6RF67;D6RF08;D6RBZ2;D6RDH3;D6REQ4;D6R9F1;D6RB63;D6RC13;Q8N7B6-2;Q8N7B6-3;Q8N7B6-4;D6R9N9 Q8N7B6 PACRGL PACRG-like protein 1 SSLST(0.006)S(0.041)S(0.952)PESAR;SSLST(0.001)S(0.019)S(0.981)PESAR 244.73 6.38E-14 41769000 10043.5 10363.3 10751.6 9719.8 11842.6 9886 10943.9 10081.7 8086.1 7223.3 TRUE FALSE 9189.247584 9688.647286 10021.81135 10468.42068 11370.88416 10445.73678 10213.8524 9993.55676 8926.679031 8118.176937 1.131934874 1.193451111 1.234490382 1.289503883 1.400669664 1.286709671 1.258146069 1.231009971 1.099591583 1 12.98694007 -8.400850298 2.023599419 1.001071322 1.26136517 0.624499685 0.065573957 0.220304015 1.860445726 0.069959908 0.019807109 3.97E-09 8.400850298 0.260293848 SSLSTSS(ph)PESAR ddPTM_A459_MK2206_30min_R2 1 SSLSTSSPESAR 12 0 Q8N7B6;D6RF51;D6RGK2;D6RAM4;D6RC23;D6R9D1;D6REJ6;D6RF67;D6RF08;D6RBZ2;D6RDH3;D6REQ4;D6R9F1;D6RB63;D6RC13;Q8N7B6-2;Q8N7B6-3;Q8N7B6-4;D6R9N9 Q8N7B6 PACRGL PACRG-like protein 1 SSLS(0.006)T(0.125)S(0.125)S(0.744)PESAR 145.14 0.00069123 16407000 21379 25537 28273 28141 27753 29299 23926 25170 27171 24007 TRUE FALSE 23015.79268 24268.86971 29215.60771 25841.79028 26663.27777 30413.99398 20784.48746 28459.80542 29534.28447 23223.65356 0.991049605 1.045006534 1.258010831 1.112735781 1.14810866 1.309612801 0.894970613 1.225466327 1.271732908 1 14.50330734 -5.055968852 7.505797013 1.155471194 1.003833247 0.170557764 0.121151299 0.387582328 46.8247014 0.029862145 0.081629448 8.79E-06 5.055968852 -0.151637948 SSLVNESETNQNSSS(ph)DSEAER ddPTM_A459_MK2206_30min_R2 1 SSLVNESETNQNSSSDSEAER 21 0 Q9NQB0;Q5VVR7;E2GH26;C6ZRJ7;A0A0D9SGH8;C6ZRK5;Q9NQB0-13;Q9NQB0-3;Q9NQB0-7;Q9NQB0-5;Q9NQB0-8;Q9NQB0-16;Q9NQB0-2;Q9NQB0-14;Q9NQB0-6;Q9NQB0-4;Q9NQB0-9;Q9NQB0-12;Q9NQB0-10;Q9NQB0-15;Q9NQB0-11;A0A0A0MTL7 Q9NQB0 TCF7L2 Transcription factor 7-like 2 1 SSLVNESETNQNS(0.012)S(0.337)S(0.647)DS(0.004)EAER 153.06 9.14E-07 6132400 15330 20315 19433 23261 19939 21204 21337 19646 18204 20098 TRUE FALSE 16503.67659 19306.18664 20080.88652 21360.50189 19156.09467 22010.93308 18535.42627 22213.79965 19787.35101 19442.20391 0.848858322 0.99300402 1.03285032 1.098666694 0.985284115 1.132121296 0.953360347 1.142555636 1.017752468 1 14.24690415 -4.688041136 1.821074977 1.050500223 0.747898037 0.500118399 0.059158867 0.850865815 2.40867692 0.014663442 0.480632359 2.05E-05 4.688041136 -0.302602186 SSLVSSS(ph)PASVR ddPTM_A459_MK2206_30min_R1 1 SSLVSSSPASVR 12 0 S4R3K6;Q86VQ0 S4R3K6 LCA5 Lebercilin 1 SS(0.001)LVS(0.246)S(0.246)S(0.504)PAS(0.002)VR 96.756 0.018496 0 2420.6 1690.5 1620 1361.2 2261.4 2200.7 2561.8 2194.3 1764.9 1547.5 TRUE FALSE 2214.715259 1580.448143 1510.038914 1466.03986 2171.323649 2325.301732 2390.906996 2175.115466 1948.367671 1739.215983 1.273398635 0.908712982 0.868229667 0.842931455 1.248449687 1.33698273 1.374703901 1.250629874 1.120256305 1 10.76422139 -6.277209114 24.01378258 1.247769237 0.961197213 0.390032021 0.149861048 442.6543004 674061.7149 0.047047595 0.053547819 5.28E-07 6.277209114 -0.286572024 SSMS(ph)GLHLVK ddPTM_A459_MK2206_30min_R2 1 SSMSGLHLVK 10 0 Q13085;A0A0C4DGT1;Q13085-4;Q13085-2 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase 1 S(0.105)S(0.095)MS(0.801)GLHLVK 101.89 0.015876 7188600 18799 23987 28620 26926 28726 26562 28855 15677 18799 27368 TRUE FALSE 20238.26589 22795.84046 29574.17652 24726.05967 27598.0729 27572.83552 25066.30384 17726.03773 20434.10304 26474.9844 0.764429757 0.861033197 1.11706115 0.933940481 1.042420743 1.041467489 0.946792015 0.669539119 0.771826821 1 14.69234221 -7.632351947 8.339931925 0.79122458 0.967563136 0.223520074 0.120817095 0.3153179 22.10260602 0.05786515 0.0332649 2.33E-08 7.632351947 0.176338556 SSPAAKPGS(ph)TPSRPSSAK ddPTM_A459_MK2206_30min_R1 1 SSPAAKPGSTPSRPSSAK 18 2 Q15555-5;K7ERD8;Q15555-2;Q15555-4;Q15555-3;Q15555;K7EL66 Q15555-5 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 S(0.022)S(0.022)PAAKPGS(0.475)T(0.475)PS(0.006)RPSSAK 76.78 0.016182 5515600 1897.1 1641.2 1415.9 1430.4 1506.8 1302.5 1545.8 1218.5 1172.6 1214.1 TRUE FALSE 1735.741683 1534.357582 1319.792653 1540.569656 1446.780965 1376.246424 1442.682502 1207.846783 1294.495966 1364.511874 1.272060519 1.124473602 0.967226946 1.1290262 1.060291957 1.008599816 1.057288346 0.885185982 0.948687945 1 10.41416923 -1.522878745 0.428833961 0.976247837 6.329898327 0.63672514 0.063079528 56.65371956 0.7136907 0.044553594 261.835484 0.03 1.522878745 5.35365049 SSPASSQEGSPSGDQQFS(ph)PK ddPTM_A459_MK2206_30min_R2 1 SSPASSQEGSPSGDQQFSPK 20 0 Q6ZW49-1;Q6ZW49 Q6ZW49-1 PAXIP1 PAX-interacting protein 1 1 SSPASSQEGSPSGDQQFS(1)PK 256.19 1.73E-96 0 12758 10182 13574 9330.1 13074 8024.8 14220 11203 12083 13616 TRUE FALSE 13734.76229 9676.376686 14026.55039 8567.800984 12560.64907 8330.189387 12352.89692 12667.27057 13133.9575 13171.71104 1.042747009 0.734633235 1.064899643 0.650469856 0.953608004 0.632430317 0.937835402 0.961702738 0.997133741 1 13.68515515 -7.507255202 24.4202051 0.977604821 0.842093363 0.171671329 0.139893416 892.6343961 1395230.362 0.056196032 0.03654004 3.11E-08 7.507255202 -0.135511459 SSPAT(ph)SLFVELDEEEVK ddPTM_A459_MK2206_30min_R1 1 SSPATSLFVELDEEEVK 17 0 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 S(0.007)S(0.007)PAT(0.493)S(0.493)LFVELDEEEVK 80.469 0.038701 4302200 935.8 801.09 757.86 667.87 561.23 540.01 702.04 702.54 1035.5 1155.4 TRUE FALSE 856.2052959 748.9388954 706.4185747 719.3094631 538.8750207 570.5848995 655.2081925 696.3977668 1143.143931 1298.539675 0.659360135 0.576754727 0.544010005 0.553937224 0.414985411 0.439405057 0.504573103 0.536293022 0.880330384 1 10.34267438 -8.342355257 3.123350362 0.994288861 0.521687953 0.866443913 0.065362975 0.088892093 1.591518562 0.06854723 0.018714978 4.55E-09 8.342355257 -0.472600908 SSPGAVAGLSNAPGT(ph)PR ddPTM_A459_MK2206_30min_R2 2 SSPGAVAGLSNAPGTPR 17 0 Q9BWG4-2;Q9BWG4;V9GYB2;U3KPY3 Q9BWG4-2;U3KPY3 SSBP4 Single-stranded DNA-binding protein 4 1 SSPGAVAGLSNAPGT(1)PR;SSPGAVAGLSNAPGT(1)PR 241.98 2.30E-22 17373600 26825 31515 34999 35421 29058 32329 34875 31753 25587 34050 TRUE FALSE 28878.74262 29950.01093 36165.84919 32526.99099 27917.03692 33559.30275 30295.87061 35903.22612 27812.51101 32938.95129 0.876735339 0.909258181 1.097966018 0.987493218 0.847538729 1.01883337 0.919758202 1.089992994 0.844365407 1 15.007507 -5.01793386 24.4782498 0.976289485 0.884865968 0.144703645 0.082142543 896.8043723 1224077.565 0.020008495 0.055548079 9.60E-06 5.01793386 -0.091423518 SSPGLYTSPGQDSLQPTAVS(ph)PPYGGDISPVSPSR ddPTM_A459_MK2206_30min_R1 1 SSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSR 34 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 SSPGLYTSPGQDS(0.003)LQPT(0.072)AVS(0.437)PPY(0.072)GGDIS(0.34)PVS(0.063)PS(0.012)R 86.886 1.14E-08 5001500 441.77 746.54 571.37 406.59 520.79 375.1 534.54 516.99 572.43 472.39 TRUE FALSE 404.1951417 697.9401103 532.5869963 437.9056322 500.0458315 396.3378378 498.8818119 512.4700109 631.936147 530.9132396 0.761320516 1.314602949 1.003152599 0.824815807 0.941859788 0.746520916 0.939667303 0.965261313 1.190281387 1 9.052332309 -10.6533841 6.132150412 1.000000165 0.964656718 0.003788119 0.168665244 3.82E-07 5.42E-08 0.164532297 0.039904758 2.22E-11 10.6533841 -0.035343447 SSPGLYTSPGQDSLQPTAVSPPYGGDIS(ph)PVSPSR ddPTM_A459_MK2206_30min_R1 1 SSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSR 34 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 SSPGLYTSPGQDSLQPTAVSPPYGGDIS(0.855)PVS(0.101)PS(0.044)R 167.38 3.45E-35 4514800 826.12 671.49 601.35 799.68 989.5 745.38 866.54 909.9 705.6 647.89 TRUE FALSE 755.8541559 627.775879 560.5320375 861.2714922 950.0861197 787.5827715 808.7346977 901.9448402 778.949645 728.1555045 1.038039473 0.862145345 0.769797157 1.182812582 1.304784643 1.081613428 1.110662067 1.238670634 1.06975727 1 9.508102774 -5.773450989 24.99998493 1.154193065 0.887209124 0.55361769 0.102890544 146.9298603 305807.745 0.028793378 0.043079826 1.68E-06 5.773450989 -0.26698394 SSPGLYTSPGQDSLQPTAVSPPYGGDISPVS(ph)PSR ddPTM_A459_MK2206_30min_R1 1 SSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSR 34 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 SSPGLYTSPGQDSLQPT(0.003)AVS(0.003)PPYGGDIS(0.211)PVS(0.637)PS(0.146)R 81.517 3.04E-06 0 408.2 427.44 394.68 360.85 473.65 499.71 549.07 435.07 511.09 477.45 TRUE FALSE 373.4804465 399.6135783 367.8902212 388.6427295 454.7835175 528.0031484 512.4425421 431.2662289 564.2196345 536.6001106 0.696012616 0.744713932 0.685594755 0.724268821 0.847527812 0.983978829 0.954980314 0.803701342 1.051471335 1 9.067703542 -6.430571969 2.753897096 0.945886786 0.711338104 0.775397248 0.062125512 0.133504007 1.97456547 0.020600717 0.023275714 3.71E-07 6.430571969 -0.234548682 SSPGQT(ph)PEEGAQALAEFAALHGPALR ddPTM_A459_MK2206_30min_R1 1 SSPGQTPEEGAQALAEFAALHGPALR 26 0 Q14166 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 1 S(0.293)S(0.293)PGQT(0.414)PEEGAQALAEFAALHGPALR 200.33 5.60E-32 83951000 2681.5 2249 2677.6 2667.1 2545.5 2453.6 2712.2 2681.5 2491.5 2481.5 TRUE FALSE 2453.424344 2102.589691 2495.851972 2872.520504 2444.107345 2592.520712 2531.274087 2658.055928 2750.500341 2788.926954 0.879701901 0.753906332 0.894914787 1.029973374 0.87636119 0.929576412 0.907615771 0.953074775 0.986221721 1 11.44549443 -1.522878745 0.229097162 0.988290026 0.019064808 0.393349685 0.058259971 53.42232298 0.697846706 0.088939103 19.39116734 0.03 1.522878745 -0.969225219 SSPGSVAAS(ph)PSGGGGR ddPTM_A459_MK2206_30min_R1 1 SSPGSVAASPSGGGGR 16 0 Q9BXB5;Q9BXB5-2 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 1 SSPGS(0.004)VAAS(0.987)PS(0.008)GGGGR 178.85 1.09E-06 2185600 1221 1010.9 900.84 806.49 1049.7 769.14 1056.7 843.31 841.82 769.05 TRUE FALSE 1117.147538 945.0902263 839.6934907 868.6059995 1007.888226 812.6880421 986.2094711 835.9370296 929.3302015 864.32572 1.292507573 1.093442211 0.971501219 1.00495216 1.166097691 0.940256692 1.141015995 0.967155102 1.075208316 1 9.755431282 -4.795315957 3.433475732 1.036053341 1.320705749 0.546596694 0.070743298 0.205322671 3.964052886 0.01673676 0.151044392 1.60E-05 4.795315957 0.284652408 SSPGSVAAS(ph)PSGGGGR ddPTM_A459_MK2206_30min_R2 2 SSPGSVAASPSGGGGR 16 0 Q9BXB5;Q9BXB5-2 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 1 SSPGSVAAS(0.973)PS(0.027)GGGGR;SSPGS(0.002)VAAS(0.872)PS(0.126)GGGGR 151.11 0.00083039 0 10553.8 13286.7 10842.6 13318.1 14337 16127.3 12394.1 11242.5 13262.3 12463.2 TRUE FALSE 11361.80704 12626.9018 11204.08687 12229.96863 13774.05734 16741.0357 10766.73978 12711.93335 14415.83088 12056.5268 0.942378118 1.0473084 0.929296393 1.01438572 1.142456494 1.388545472 0.893021677 1.05436114 1.195686877 1 13.55752674 -6.135849275 4.664846461 1.117379296 0.979536387 0.205890935 0.125335884 0.388900871 13.0807588 0.03853472 0.050612579 7.31E-07 6.135849275 -0.137842909 SSPGSVAASPS(ph)GGGGR ddPTM_A459_MK2206_30min_R2 1 SSPGSVAASPSGGGGR 16 0 Q9BXB5;Q9BXB5-2 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 1 SSPGSVAAS(0.282)PS(0.718)GGGGR 134.93 0.00053405 0 4088.1 4082.2 4465.9 4963.1 3168.6 6484.3 4420.4 4578.8 4702.7 4442.1 TRUE FALSE 4401.088079 3879.483884 4614.790877 4557.598854 3044.184843 6731.06458 3839.99617 5177.264881 5111.732345 4297.154641 1.024186572 0.902802949 1.073917804 1.060608527 0.708418732 1.566400361 0.89361368 1.204812327 1.189562111 1 12.06916598 -6.730319109 24.99999941 1.166350645 0.963729866 0.246256685 0.189260211 305.5025557 245420.0883 0.059353819 0.059348153 1.86E-07 6.730319109 -0.202620779 SSPNPFVGS(ph)PPK ddPTM_A459_MK2206_30min_R1 1 SSPNPFVGSPPK 12 0 P98082-3;P98082 P98082-3 DAB2 Disabled homolog 2 1 SSPNPFVGS(1)PPK 77.24 0.046229 47705000 3954.8 5031.5 5384.3 4652.5 3878.2 3256 4520.3 3878.8 5803.2 6438.3 TRUE FALSE 3618.423493 4703.948435 5018.828718 5010.836356 3723.723082 3440.351906 4218.759035 3844.888061 6406.463407 7235.925211 0.500063694 0.650082512 0.693598755 0.692494216 0.514616027 0.475454321 0.583029663 0.531360945 0.885368936 1 12.82096178 -8.389123764 3.829979824 0.994081052 0.58453784 0.792469534 0.075045479 0.105982026 2.558042116 0.079342911 0.02099496 4.08E-09 8.389123764 -0.409543212 SSPNPFVGS(ph)PPK ddPTM_A459_MK2206_30min_R2 1 SSPNPFVGSPPK 12 0 P98082-3;P98082 P98082-3 DAB2 Disabled homolog 2 1 SS(0.001)PNPFVGS(0.999)PPK 109.14 0.0077648 20626000 83724 67907 87804 63208 68041 47387 93901 83895 59727 94669 TRUE FALSE 90133.97381 64534.83713 90731.34154 58043.70421 65369.36846 49190.34549 81571.6859 94860.36455 64921.9465 91579.95828 0.984210689 0.704682971 0.990733598 0.633803567 0.713795569 0.537130027 0.890715473 1.035820133 0.708909981 1 16.48274429 -9.993526408 7.848986362 0.999999983 0.797237864 0.123211209 0.159923949 0 0 0.157129086 0.038109401 1.02E-10 9.993526408 -0.202762119 SSPNPFVGS(ph)PPKGLSIQNGVK ddPTM_A459_MK2206_30min_R1 1 SSPNPFVGSPPKGLSIQNGVK 21 1 P98082-3;P98082 P98082-3 DAB2 Disabled homolog 2 1 S(0.015)S(0.015)PNPFVGS(0.97)PPKGLS(0.001)IQNGVK 51.611 0.02875 17034000 2720.3 2697 3302.9 2867.6 2964.9 2228 2144.4 2882.4 2017.1 1525.8 TRUE FALSE 2488.9242 2521.42481 3078.70835 3088.463049 2846.801755 2354.147435 2001.350989 2857.199481 2226.784763 1714.827623 1.451413639 1.470366336 1.795345671 1.801034114 1.660109574 1.372818704 1.167085812 1.666172997 1.29854729 1 10.74384785 -6.798583223 5.533130455 1.330846238 1.645078913 0.430299361 0.191226344 0.20689009 15.85197591 0.069182709 0.062352426 1.59E-07 6.798583223 0.314232675 SSPNPFVGS(ph)PPKGLSIQNGVK ddPTM_A459_MK2206_30min_R2 2 SSPNPFVGSPPKGLSIQNGVK 21 1 P98082-3;P98082 P98082-3 DAB2 Disabled homolog 2 1 SSPNPFVGS(0.995)PPKGLS(0.005)IQNGVK;SSPNPFVGS(0.895)PPKGLS(0.105)IQNGVK 82.302 0.0008773 20919100 46634 116407 109495 104439 134875 95441 116339 83777 136244 101166 TRUE FALSE 50204.3349 110626.3977 113145.5087 95905.99962 129579.1298 99073.07413 101063.5496 94726.94155 148094.2568 97864.96171 0.51299601 1.130398416 1.156139099 0.979983009 1.324060497 1.012344688 1.032683688 0.967935203 1.513251058 1 16.57850481 -4.76081323 24.96358653 1.119485449 0.512995306 0.55067026 0.165554756 10.99228859 437895.1766 0.038974917 0.225554189 1.73E-05 4.76081323 -0.606490143 SSPNVANQPPS(ph)PGGK ddPTM_A459_MK2206_30min_R1 3 SSPNVANQPPSPGGK 15 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 SSPNVANQPPS(1)PGGK;SSPNVANQPPS(1)PGGK;SSPNVANQPPS(1)PGGK 222.64 3.73E-51 42306000 7627.3 8314.1 8814.5 7213 7346.1 6334.7 7450.4 7409.5 7159.1 5822.23 TRUE FALSE 6978.558082 7772.850579 8216.196299 7768.54651 7053.489281 6693.36524 6953.39741 7344.719523 7903.314064 6543.531808 1.066481877 1.187867776 1.255621053 1.187210017 1.077933063 1.022897945 1.062636756 1.122439645 1.207805555 1 12.67585381 -6.261299946 24.88640466 1.08445566 1.181073646 0.300190348 0.068462475 15.47062381 2761361.409 0.021707106 0.026300217 5.48E-07 6.261299946 0.096617986 SSPNVANQPPS(ph)PGGK ddPTM_A459_MK2206_30min_R2 3 SSPNVANQPPSPGGK 15 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 SSPNVANQPPS(1)PGGK;SSPNVANQPPS(1)PGGK;SSPNVANQPPS(1)PGGK 238.05 5.75E-20 64342000 127943 138170 134326 138032 123371 95190 134807 105532 117564 119168 TRUE FALSE 137738.4145 131308.6787 138804.3618 126754.3441 118526.8347 98812.52215 117106.679 119325.3947 127789.5042 115279.5579 1.194820807 1.139045648 1.204067437 1.099538776 1.028168713 0.857155631 1.01584948 1.035095874 1.10851834 1 16.81477718 -6.097558208 2.791149929 1.001626392 1.174269786 0.617039692 0.060869714 0.194574575 2.947470476 0.020276734 0.028329372 7.99E-07 6.097558208 0.172643394 SSPQLDPLRKS(ph)PT(ph)MEQAVQTASAHLPAPAAVGR ddPTM_A459_MK2206_30min_R2 2 SSPQLDPLRKSPTMEQAVQTASAHLPAPAAVGR 33 2 Q8ND56-3;Q8ND56-2;Q8ND56 Q8ND56-3 LSM14A Protein LSM14 homolog A 2 S(0.154)S(0.154)PQLDPLRKS(0.831)PT(0.831)MEQAVQT(0.018)AS(0.013)AHLPAPAAVGR;S(0.141)S(0.141)PQLDPLRKS(0.847)PT(0.857)MEQAVQT(0.009)AS(0.004)AHLPAPAAVGR 52.814 0.0049103 32747500 7100.2 26162.9 20351.7 30265.4 37103.2 38352.1 28372.7 18772.6 34124.3 18622.9 TRUE FALSE 7643.796771 24863.68843 21030.21552 27792.62001 35646.34194 39811.61604 24647.33041 21226.24328 37092.36993 18015.2363 0.424296226 1.380147783 1.167357184 1.542728585 1.978677457 2.209885864 1.368138058 1.178238405 2.058944402 1 14.13692995 -4.737842302 1.196977022 1.63633335 1.05E-10 0.427816087 0.389583241 1.699306128 1.932328501 0.121319044 3.57180307 1.83E-05 4.737842302 -1.63633335 SSPS(ph)PALEQPFR ddPTM_A459_MK2206_30min_R1 2 SSPSPALEQPFR 12 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.028)S(0.016)PS(0.956)PALEQPFR;SSPS(0.999)PALEQPFR 192.4 0.00010424 38964000 3810.6 3726.3 3548.6 2898.3 3568.8 3247.5 4217.2 3714.7 3004.9 3285.1 TRUE FALSE 3486.48846 3483.717193 3307.730919 3121.527568 3426.647139 3431.370644 3935.878283 3682.22277 3317.270108 3692.082989 0.944314759 0.943564162 0.895898312 0.845465169 0.928106749 0.929386109 1.06603191 0.997329361 0.898482 1 11.85021927 -7.023479815 22.17972422 0.99130556 0.910723356 0.398751955 0.046151507 194.6479762 183869.1887 0.018340094 0.014333345 9.47E-08 7.023479815 -0.080582204 SSPS(ph)PALEQPFR ddPTM_A459_MK2206_30min_R2 3 SSPSPALEQPFR 12 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.004)S(0.015)PS(0.981)PALEQPFR;S(0.008)S(0.004)PS(0.987)PALEQPFR;S(0.028)S(0.002)PS(0.97)PALEQPFR 177.21 0.00010363 27574400 43957 48988 46399 59653 54960 55202 66719 55127 48468 60445 TRUE FALSE 47322.38172 46555.32716 47945.9195 54779.15908 52801.99425 57302.75079 57958.71516 62332.28818 52683.65903 58472.6846 0.809307492 0.796189323 0.819971237 0.936833317 0.903019839 0.979991789 0.991210093 1.06600695 0.90099607 1 15.83547521 -5.987065101 0.936766334 0.994416771 0.78559771 0.749234735 0.04334065 0.294913435 0.521978681 0.018552626 0.042008686 1.03E-06 5.987065101 -0.208819061 SSPS(ph)PEVVKPK ddPTM_A459_MK2206_30min_R1 1 SSPSPEVVKPK 11 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 S(0.001)SPS(0.999)PEVVKPK 193.15 9.62E-05 12661000 3613.3 3490.7 3487.5 2923.9 3139 2814.8 3446 3182.9 3039.8 2918 TRUE FALSE 3305.969861 3263.454796 3250.778217 3149.099285 3013.966983 2974.171543 3216.123628 3155.072241 3355.798088 3279.50387 1.00807012 0.995106249 0.991240854 0.96023649 0.919031385 0.906896793 0.980673832 0.962057789 1.023263951 1 11.67926186 -10.6713274 8.259119798 1.000000003 0.969263994 0.050668227 0.034999011 1.99E-09 2.00E-10 0.036990701 0.008971562 2.13E-11 10.6713274 -0.030736009 SSPS(ph)PEVVKPK ddPTM_A459_MK2206_30min_R2 2 SSPSPEVVKPK 11 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 S(0.006)S(0.021)PS(0.974)PEVVKPK;S(0.002)S(0.028)PS(0.97)PEVVKPK 156 0.002571 32531600 226946 241929 237040 254870 249269 191145 253631 227057 171064 248026 TRUE FALSE 244321.1603 229915.1577 244942.7953 234046.3057 239481.4466 198419.1569 220328.945 256734.1295 185942.8375 239932.9319 1.018289396 0.958247606 1.020880266 0.975465535 0.998118285 0.826977586 0.918293888 1.070024558 0.774978391 1 17.87227166 SSPSGASS(ph)PR ddPTM_A459_MK2206_30min_R2 2 SSPSGASSPR 10 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 SSPSGAS(0.007)S(0.993)PR;SSPSGAS(0.007)S(0.993)PR 111.27 0.008954 4424900 20286.7 7855.1 9145.1 14542.9 25647 12718.1 15737.8 74845 41256 24505 TRUE FALSE 21839.86535 7465.027156 9449.99307 13354.69855 24639.96991 13202.09621 13671.40796 84627.49848 44844.37231 23705.40386 0.921303239 0.314908246 0.39864299 0.563360938 1.039424178 0.556923488 0.576721158 3.569966536 1.891736271 1 14.53292835 -7.728893862 24.95292311 2.29813861 0.614888052 0.555118497 0.623395324 111.5373083 85516.61117 0.274816604 0.158650461 1.87E-08 7.728893862 -1.683250558 SSPST(ph)GSLDSGNESK ddPTM_A459_MK2206_30min_R1 2 SSPSTGSLDSGNESK 15 0 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 "Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2" 1 SSPS(0.001)T(0.827)GS(0.066)LDS(0.107)GNESK;SSPS(0.004)T(0.851)GS(0.145)LDSGNESK 238.64 1.25E-19 48899000 10463.5 7496.9 7294 5822.6 5895.3 5515 6496.8 6609.2 5796.9 5878 TRUE FALSE 9573.524379 7008.850447 6798.903602 6271.057661 5660.477717 5827.254534 6063.410326 6551.416461 6399.508499 6606.211017 1.449170236 1.060948618 1.029168397 0.949266932 0.856841797 0.882087254 0.917834794 0.9917056 0.968710882 1 12.68960734 -3.678871831 1.061355017 0.933331263 5.522812509 0.908078999 0.047935027 4.416710362 0.66016272 0.016171848 39.12898066 0.000209473 3.678871831 4.589481246 SSPST(ph)GSLDSGNESK ddPTM_A459_MK2206_30min_R2 2 SSPSTGSLDSGNESK 15 0 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 "Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2" 1 SS(0.002)PS(0.051)T(0.852)GS(0.093)LDS(0.001)GNESK;SSPS(0.003)T(0.737)GS(0.26)LDSGNESK 220.52 4.80E-09 36607000 111996 78158 77569 71322 78876 51054 74097 65133 59803 74605 TRUE FALSE 120570.4999 74276.78737 80155.11174 65494.76445 75778.93192 52996.89575 64367.97489 73646.10674 65004.55684 72170.64496 1.670630766 1.029182813 1.110633164 0.907498672 1.049996601 0.734327589 0.89188582 1.020444071 0.900706331 1 16.13912453 -2.317693138 1.103816441 0.931203357 200 0.823114521 0.09921522 164.4586995 0.989156024 0.029767042 81960.69004 0.004811792 2.317693138 199.0687966 SSPSTGS(ph)LDSGNESK ddPTM_A459_MK2206_30min_R2 2 SSPSTGSLDSGNESK 15 0 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 "Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2" 1 SSPST(0.001)GS(0.632)LDS(0.159)GNES(0.208)K;SSPST(0.03)GS(0.674)LDS(0.275)GNES(0.02)K 153.48 0.00020685 15703200 86489 72852 61780 70948 63967 57375 67006 52161 57252 74143 TRUE FALSE 93110.66434 69234.27562 63839.71437 65151.32145 61455.33417 59558.44583 58208.03171 58978.6218 62231.67547 71723.71998 1.298185096 0.965291198 0.890078127 0.908365063 0.856834171 0.830387016 0.811559017 0.822302884 0.867658224 1 16.1301627 SSPVCSTAPVETEPKLS(ph)PSWNPK ddPTM_A459_MK2206_30min_R1 1 SSPVCSTAPVETEPKLSPSWNPK 23 1 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 SSPVCSTAPVET(0.003)EPKLS(0.765)PS(0.231)WNPK 84.66 0.00016077 9880500 1960.8 1988.1 2181.7 1811.6 1532 1484.9 1275.3 1786.1 1578.7 1344.4 TRUE FALSE 1794.023663 1858.674329 2033.612283 1951.129746 1470.977196 1568.973755 1190.227064 1770.484316 1742.811514 1510.954422 1.18734466 1.230132625 1.345912394 1.291322702 0.973541739 1.038399129 0.787731944 1.171765535 1.153450752 1 10.56124443 -6.258501005 24.93918517 1.018628192 1.267155879 0.557626351 0.105942966 200.612858 1702681.957 0.033622764 0.041487596 5.51E-07 6.258501005 0.248527687 SSPVCSTAPVETEPKLS(ph)PSWNPK ddPTM_A459_MK2206_30min_R2 2 SSPVCSTAPVETEPKLSPSWNPK 23 1 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 SSPVCSTAPVET(0.146)EPKLS(0.711)PS(0.143)WNPK;SSPVCSTAPVET(0.001)EPKLS(0.743)PS(0.256)WNPK 96.133 4.05E-05 12944700 44586 66770 62645 60377 68795 46512 66028 41825 57812 61097 TRUE FALSE 47999.53844 63454.29889 64733.55303 55444.00596 66093.76263 48282.04675 57358.44429 47291.67111 62840.38326 59103.40989 0.812128074 1.073614856 1.095259193 0.938084724 1.118273256 0.816907973 0.970476059 0.800151314 1.063227712 1 15.85095375 -6.762508614 24.99999773 0.920182302 1.012168826 0.105261663 0.11039833 57.41516045 1342413.74 0.035964617 0.033535137 1.73E-07 6.762508614 0.091986524 SSPVCSTAPVETEPKLSPS(ph)WNPK ddPTM_A459_MK2206_30min_R1 1 SSPVCSTAPVETEPKLSPSWNPK 23 1 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 SSPVCSTAPVET(0.003)EPKLS(0.398)PS(0.599)WNPK 111.84 4.16E-05 0 1981.3 2325.4 2358.8 2335.9 1881.3 1604.8 1950.4 2206.2 1921.8 1721.6 TRUE FALSE 1812.780031 2174.016037 2198.691228 2515.811423 1806.363837 1695.662389 1820.292375 2186.911426 2121.577987 1934.884805 0.936893 1.12358939 1.136342185 1.300238348 0.933576941 0.876363484 0.94077558 1.13025407 1.096488009 1 10.91803196 -6.308519824 24.99943696 0.993988367 1.125080591 0.253639243 0.107541312 622.693633 330645.0856 0.036138483 0.040977292 4.91E-07 6.308519824 0.131092224 SSPVNNHHS(ph)PGQTPTLGQPEAR ddPTM_A459_MK2206_30min_R2 2 SSPVNNHHSPGQTPTLGQPEAR 22 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2;E7EWM2;E7EMW0;Q96L14 H0Y2V6 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein 1 S(0.017)S(0.017)PVNNHHS(0.965)PGQTPTLGQPEAR;S(0.002)S(0.002)PVNNHHS(0.995)PGQTPT(0.001)LGQPEAR 101.05 8.24E-05 26089000 32613 38084 38317 47915 50077 42180 49024 36279 44620 45452 TRUE FALSE 35109.87636 36192.80394 39594.46966 44000.19123 48110.72536 43785.18946 42587.08991 41020.78986 48500.96695 43968.90496 0.798516051 0.823145447 0.900510706 1.000711554 1.094198853 0.995821695 0.968572903 0.93295 1.103074252 1 15.42419598 -5.535509998 2.292280002 1.0123584 0.807941254 0.740204942 0.048925975 0.160240723 1.666558563 0.014692376 0.034811909 2.91E-06 5.535509998 -0.204417146 SSQASQNRHS(ph)MEISPPVLISSSNPTAAAR ddPTM_A459_MK2206_30min_R2 2 SSQASQNRHSMEISPPVLISSSNPTAAAR 29 1 Q7Z6J0;Q7Z6J0-3;H0YA90 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 1 S(0.039)S(0.039)QAS(0.082)QNRHS(0.806)MEIS(0.034)PPVLISSSNPTAAAR;S(0.003)S(0.003)QAS(0.034)QNRHS(0.959)MEIS(0.001)PPVLISSSNPTAAAR 88.433 1.66E-06 13539700 5375.8 12514 14435.2 19056.6 17447.4 20645.4 14307.3 10970.7 16131.5 10828.7 TRUE FALSE 5787.375381 11892.57296 14916.46236 17499.61482 16762.32741 21431.07516 12428.73432 12404.60816 17534.58871 10475.36041 0.552475061 1.135290099 1.42395696 1.670550143 1.600167131 2.04585564 1.186473194 1.18417006 1.673888824 1 13.35471226 -4.817626821 1.83863866 1.505070301 0.291186184 0.492951229 0.286492408 0.653809899 2.45556116 0.079905324 1.357197184 1.52E-05 4.817626821 -1.213884117 SSQCHTGS(ph)SPR ddPTM_A459_MK2206_30min_R2 1 SSQCHTGSSPR 11 0 O15226;O15226-2 O15226 NKRF NF-kappa-B-repressing factor 1 SSQCHT(0.001)GS(0.5)S(0.5)PR 81.709 0.041372 323860 0 0 0 0 480.95 822.83 657.64 7162.7 2203.3 498.78 TRUE FALSE 0 0 0 0 462.0654864 854.1433722 571.291078 8098.889483 2394.939051 482.5048494 0 0 0 0 0.957639052 1.770227539 1.18401106 16.78509448 4.963554364 1 8.914399632 -7.564197616 24.99987616 8.521521726 0.503973294 0.419466812 3.746254452 116.6088108 70552.62481 1.62866793 0.940312918 2.73E-08 7.564197616 -8.017548432 SSQCHTGSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 SSQCHTGSSPR 11 0 O15226;O15226-2 O15226 NKRF NF-kappa-B-repressing factor 1 SSQCHTGS(0.003)S(0.997)PR 109.16 0.0095568 259850 0 0 0 0 679.15 639.93 585.57 10919 2059.6 611.44 TRUE FALSE 0 0 0 0 652.4831585 664.2829846 508.6839556 12346.15079 2238.740285 591.4887629 0 0 0 0 1.103120126 1.123069492 0.860006119 20.87300988 3.784924458 1 9.20820695 -7.574604358 24.99979154 9.770712236 0.406826762 0.360404448 4.875201758 88.492688 42768.83816 2.099234285 1.211993662 2.66E-08 7.574604358 -9.363885474 SSQDGDTPAQAS(ph)PPEEK ddPTM_A459_MK2206_30min_R1 2 SSQDGDTPAQASPPEEK 17 0 A0A0C4DGE6;E9PNT2;E9PIR1;A0A0G2JRG8;A0A0G2JNY3;Q6ZUM4-2;Q6ZUM4-3;Q6ZUM4;E9PNX6 A0A0C4DGE6 ARHGAP27 Rho GTPase-activating protein 27 1 SSQDGDTPAQAS(1)PPEEK;SSQDGDT(0.034)PAQAS(0.966)PPEEK 267.69 1.85E-51 12937200 4973.5 6408.5 6551.7 5766.9 4758.3 4122.4 5445.8 5341.1 5412.1 5172.2 TRUE FALSE 4550.477708 5991.305485 6106.988858 6211.067637 4568.766835 4355.806725 5082.520618 5294.403326 5974.707162 5812.971184 0.782814427 1.030678683 1.050579586 1.068484161 0.785960689 0.74932536 0.874341272 0.910791256 1.027823289 1 12.50506004 -4.734883201 23.93689417 0.935419836 0.782813139 0.166289915 0.1067977 3502.482945 3156741.554 0.029841243 2.230904555 1.84E-05 4.734883201 -0.152606696 SSQDGDTPAQAS(ph)PPEEK ddPTM_A459_MK2206_30min_R2 4 SSQDGDTPAQASPPEEK 17 0 A0A0C4DGE6;E9PNT2;E9PIR1;A0A0G2JRG8;A0A0G2JNY3;Q6ZUM4-2;Q6ZUM4-3;Q6ZUM4;E9PNX6 A0A0C4DGE6 ARHGAP27 Rho GTPase-activating protein 27 1 SSQDGDT(0.004)PAQAS(0.996)PPEEK;SSQDGDTPAQAS(1)PPEEK;S(0.001)S(0.001)QDGDT(0.183)PAQAS(0.815)PPEEK;SSQDGDT(0.004)PAQAS(0.996)PPEEK 190.25 7.45E-08 21810600 102297 110573 112603 97470 105126 90862 132233 104667 92083 120677 TRUE FALSE 110128.937 105082.1056 116357.1278 89506.38921 100998.225 94319.81708 114870.6483 118347.3363 100092.2129 116739.3194 0.943374842 0.900143209 0.996726111 0.766720156 0.865160304 0.807952433 0.983992787 1.013774424 0.857399319 1 16.83293104 -7.287847709 24.48068217 0.964939513 0.880408214 0.245208727 0.071995449 905.0149328 838949.7696 0.030760952 0.020746298 5.15E-08 7.287847709 -0.084531299 SSQLDSGVPSS(ph)PGGR ddPTM_A459_MK2206_30min_R1 1 SSQLDSGVPSSPGGR 15 0 Q70CQ4;I3L4X5 Q70CQ4 USP31 Ubiquitin carboxyl-terminal hydrolase 31 1 SSQLDSGVPS(0.126)S(0.873)PGGR 119 0.0019592 3252800 7269.6 6964.7 6539.3 6039.6 6687.9 6379.4 6758.8 6370.6 4457.2 5248 TRUE FALSE 6651.282346 6511.296764 6095.430536 6504.771038 6421.506781 6740.596115 6307.932784 6314.902516 4920.54189 5898.16186 1.127687321 1.103953557 1.033445789 1.102847157 1.088730173 1.142829965 1.069474344 1.070656022 0.834250061 1 12.5260497 -8.142698827 6.06019829 0.919032506 1.093514212 0.693474308 0.046795119 0.116049009 5.181692512 0.030762392 0.011327951 7.20E-09 8.142698827 0.174481706 SSQLDSGVPSS(ph)PGGR ddPTM_A459_MK2206_30min_R2 2 SSQLDSGVPSSPGGR 15 0 Q70CQ4;I3L4X5 Q70CQ4 USP31 Ubiquitin carboxyl-terminal hydrolase 31 1 SSQLDSGVPS(0.001)S(0.999)PGGR;SSQLDSGVPS(0.015)S(0.985)PGGR 189.8 2.67E-05 10733200 88900 116930 119785 118174 108380 121328 119730 93394 100085 105101 TRUE FALSE 95706.25235 111123.4262 123778.5721 108518.8062 104124.4566 125945.2221 104009.3072 105600.9165 108790.2124 101671.563 0.941327639 1.09296467 1.21743552 1.06734669 1.024125661 1.238745804 1.022993098 1.038647517 1.07001613 1 16.6335567 SSQPS(ph)PTAVPASDS(ph)PPTK ddPTM_A459_MK2206_30min_R1 1 SSQPSPTAVPASDSPPTK 18 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 S(0.001)S(0.001)QPS(0.935)PT(0.063)AVPAS(0.009)DS(0.868)PPT(0.124)K 150.13 0.019256 3865000 2940.6 2785.7 2422.7 2391.7 2362.7 2078.8 2764.3 2774.7 2931.7 2807.2 TRUE FALSE 2690.486528 2604.350424 2258.253874 2575.909148 2268.588656 2196.49986 2579.898591 2750.44109 3236.460706 3154.977129 0.852775287 0.82547363 0.715775038 0.816458897 0.719050745 0.696201516 0.817723389 0.871778456 1.025826994 1 11.62341383 -8.015709905 2.120540119 1.015739946 0.771344082 0.775066 0.050406313 0.156938528 1.291283115 0.044414822 0.014813615 9.64E-09 8.015709905 -0.244395864 SSQPS(ph)PTAVPASDS(ph)PPTK ddPTM_A459_MK2206_30min_R2 1 SSQPSPTAVPASDSPPTK 18 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 S(0.02)S(0.029)QPS(0.95)PTAVPAS(0.079)DS(0.549)PPT(0.372)K 208.61 2.78E-10 21915000 57516 47062 49534 47218 49006 44324 59687 53483 32668 61341 TRUE FALSE 61919.46918 44724.96951 51185.43884 43360.13836 47081.7782 46010.78088 51850.0252 60473.41173 35509.40359 59339.44819 1.043479019 0.753713944 0.862587038 0.730713542 0.793431345 0.775382689 0.873786777 1.019109776 0.598411422 1 15.85670389 -9.499621649 11.36817206 1.000002691 0.828252111 0.14450175 0.125660526 0 0 0.114929358 0.027874464 3.17E-10 9.499621649 -0.17175058 SSQPS(ph)PTAVPASDS(ph)PPTKQEVK ddPTM_A459_MK2206_30min_R1 2 SSQPSPTAVPASDSPPTKQEVK 22 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 S(0.002)S(0.003)QPS(0.902)PT(0.094)AVPAS(0.008)DS(0.909)PPT(0.083)KQEVK;S(0.011)S(0.013)QPS(0.621)PT(0.355)AVPAS(0.249)DS(0.732)PPT(0.019)KQEVK 154.46 7.99E-08 35180000 8305.1 9070.1 8617.5 8487.4 6689.3 6913.9 6653.1 7758.2 6973.6 4976.5 TRUE FALSE 7598.707633 8479.634841 8032.56811 9141.101019 6422.851016 7305.359043 6209.283838 7690.370875 7698.530675 5593.026391 1.35860393 1.516108498 1.436175614 1.634374734 1.148367729 1.306154939 1.110183183 1.374992775 1.376451699 1 12.44941342 -6.270154091 24.99498019 1.236989091 1.484862319 0.506205269 0.128459316 558.6491579 1602278.752 0.038619534 0.04445976 5.37E-07 6.270154091 0.247873228 SSQPS(ph)PTAVPASDS(ph)PPTKQEVK ddPTM_A459_MK2206_30min_R2 3 SSQPSPTAVPASDSPPTKQEVK 22 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 S(0.005)S(0.006)QPS(0.933)PT(0.057)AVPAS(0.005)DS(0.992)PPT(0.003)KQEVK;S(0.002)S(0.003)QPS(0.964)PT(0.031)AVPAS(0.084)DS(0.901)PPT(0.015)KQEVK;S(0.008)S(0.009)QPS(0.877)PT(0.106)AVPAS(0.06)DS(0.914)PPT(0.026)KQEVK 117.94 6.55E-05 97269000 175156 225322 192588 220024 227903 171668 268369 191058 183706 218258 TRUE FALSE 188566.078 214132.8371 199008.7878 202047.3354 218954.3831 178200.946 233131.8279 216029.9366 199684.4158 211136.2593 0.893101349 1.014192625 0.942560925 0.95695233 1.037028807 0.844009203 1.104177126 1.023177816 0.945760887 1 17.68781483 -7.276936222 24.99964885 1.020210426 0.955194101 0.225717532 0.062903451 1363.410712 2199457.568 0.025363527 0.017171437 5.29E-08 7.276936222 -0.065016325 SSQPS(ph)PTAVPASDSPPTK ddPTM_A459_MK2206_30min_R1 2 SSQPSPTAVPASDSPPTK 18 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SSQPS(0.57)PT(0.388)AVPASDS(0.012)PPT(0.029)K;SSQPS(0.993)PT(0.007)AVPASDSPPTK 215.62 6.60E-13 32886000 12222 12751.7 10846.9 9642.7 11753.2 12239.6 11515.2 9420.5 10977.9 10546.3 TRUE FALSE 11182.45472 11921.56201 10110.64265 10385.38242 11285.04516 12932.59557 10747.04202 9338.137562 12119.09199 11852.85526 0.943439743 1.005796641 0.853013255 0.876192461 0.952095078 1.091095376 0.906704906 0.787838656 1.022461822 1 13.53294702 -6.467649183 24.85978713 0.953446588 0.920151466 0.049843424 0.08354978 1315.442103 592102.5682 0.027645162 0.031346485 3.41E-07 6.467649183 -0.033295122 SSQPS(ph)PTAVPASDSPPTK ddPTM_A459_MK2206_30min_R2 1 SSQPSPTAVPASDSPPTK 18 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SSQPS(0.907)PT(0.092)AVPASDSPPTK 144.74 0.00028228 41660000 65458 82851 75543 81142 79396 70479 88069 69001 63680 68382 TRUE FALSE 70469.51481 78736.73982 78061.56592 74512.43904 76278.51411 73161.12773 76505.43451 78019.66762 69218.77129 66150.70094 1.0652875 1.190263122 1.18005652 1.126404376 1.153102129 1.105976606 1.156532485 1.179423143 1.046380013 1 16.01346882 -8.429805126 4.166898168 1.001318353 1.145808398 0.652089652 0.036146625 0.119919497 3.477704688 0.033884627 0.008886016 3.72E-09 8.429805126 0.144490044 SSQPSPT(ph)AVPASDS(ph)PPTKQEVK ddPTM_A459_MK2206_30min_R2 1 SSQPSPTAVPASDSPPTKQEVK 22 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 SSQPS(0.433)PT(0.567)AVPAS(0.006)DS(0.914)PPT(0.08)KQEVK 143.37 1.14E-05 37138000 18780 26501 19442 24182 27545 13885 28700 25538 19379 23873 TRUE FALSE 20217.81124 25184.99888 20090.18658 22206.25325 26463.4449 14413.4034 24931.65553 28875.90429 21064.55039 23094.02597 0.875456331 1.090541723 0.869930025 0.961558339 1.145900024 0.624118264 1.079571642 1.250362511 0.912121188 1 14.49523208 SSQPSPT(ph)AVPASDSPPTK ddPTM_A459_MK2206_30min_R2 3 SSQPSPTAVPASDSPPTK 18 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SSQPS(0.045)PT(0.955)AVPASDSPPTK;S(0.011)S(0.011)QPS(0.094)PT(0.884)AVPAS(0.001)DSPPTK;SSQPS(0.056)PT(0.944)AVPASDSPPTK 231.42 1.44E-18 61138000 277947 306508 278000 321037 279592 274492 366821 278426 267311 285547 TRUE FALSE 299226.836 291287.2584 287268.3812 294807.2502 268613.8132 284937.9854 318656.9621 314817.2342 290561.2276 276229.6248 1.083253964 1.054511292 1.039962247 1.067254283 0.972429418 1.031525803 1.15359445 1.139693957 1.051882932 1 18.07550853 -7.221647659 24.8788531 1.097934038 1.040044001 0.15075407 0.049004956 719.6092944 449919.4742 0.018681929 0.014470779 6.00E-08 7.221647659 -0.057890038 SSQPSPTAVPASDS(ph)PPTK ddPTM_A459_MK2206_30min_R1 1 SSQPSPTAVPASDSPPTK 18 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SSQPSPT(0.005)AVPAS(0.031)DS(0.96)PPT(0.003)K 149.72 0.00016242 3584800 2194.7 1985.4 1622.6 1501.4 1393.8 1480.1 1976 1429.8 2168.8 1883.9 TRUE FALSE 2008.02924 1856.150099 1512.462433 1617.038088 1338.281995 1563.901983 1844.184645 1417.299409 2394.254521 2117.291755 0.948395154 0.876662413 0.714338225 0.76372946 0.632072548 0.738633199 0.871011112 0.669392589 1.130809921 1 11.04800437 -8.266230561 24.99731595 1.065404989 0.774638367 0.584055295 0.097415014 307.2684255 1603099.952 0.086744588 0.025259115 5.42E-09 8.266230561 -0.290766622 SSQPSPTAVPASDS(ph)PPTKQEVK ddPTM_A459_MK2206_30min_R2 5 SSQPSPTAVPASDSPPTKQEVK 22 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SSQPSPTAVPAS(0.003)DS(0.991)PPT(0.007)KQEVK;SSQPSPTAVPAS(0.002)DS(0.991)PPT(0.006)KQEVK;SSQPSPTAVPAS(0.011)DS(0.986)PPT(0.003)KQEVK;SSQPSPT(0.017)AVPAS(0.006)DS(0.965)PPT(0.012)KQEVK;SSQPSPT(0.001)AVPAS(0.005)DS(0.986)PPT(0.009)KQEVK 135.23 9.69E-06 59345000 189247 238723 208375 216995 239004 172689 266998 211462 180766 232234 TRUE FALSE 203735.8958 226868.363 215322.1185 199265.8144 229619.5021 179260.8009 231940.8419 239100.8095 196488.6999 224656.2236 0.906878486 1.009846775 0.958451607 0.886981056 1.022092771 0.79793383 1.032425624 1.064296398 0.874619438 1 17.7773595 SSQQPS(ph)TPQQAPPGQPQQGTFVAHK ddPTM_A459_MK2206_30min_R2 1 SSQQPSTPQQAPPGQPQQGTFVAHK 25 0 E7ERS3;Q86VM9;H3BRH3 E7ERS3;H3BRH3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 S(0.15)S(0.15)QQPS(0.396)T(0.303)PQQAPPGQPQQGTFVAHK 70.109 0.00079851 33444000 64679 82716 90214 82831 68079 71913 87322 59622 67002 73731 TRUE FALSE 69630.87397 78608.44372 93221.68973 76063.44234 65405.87639 74649.69961 75856.51651 67414.80011 72829.71285 71325.16351 0.976245557 1.102113754 1.306995808 1.066432078 0.917009835 1.046610985 1.063530916 0.945175543 1.021094229 1 16.12212353 -5.998979432 24.9996805 1.000864713 1.135967247 0.318737982 0.085129622 41.01702429 1004669.72 0.024638079 0.036201694 1.00E-06 5.998979432 0.135102534 SSQQPST(ph)PQQAPPGQPQQGTFVAHK ddPTM_A459_MK2206_30min_R1 3 SSQQPSTPQQAPPGQPQQGTFVAHK 25 0 E7ERS3;Q86VM9;H3BRH3 E7ERS3;H3BRH3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 S(0.024)S(0.024)QQPS(0.378)T(0.574)PQQAPPGQPQQGTFVAHK;S(0.004)S(0.004)QQPS(0.236)T(0.757)PQQAPPGQPQQGTFVAHK;S(0.005)S(0.005)QQPS(0.24)T(0.751)PQQAPPGQPQQGTFVAHK 168.45 5.67E-16 36350500 5636 5438.46 5082.8 4231.1 5235.1 4911.46 5286.4 4823.9 4157.38 3985.68 TRUE FALSE 5156.628604 5084.415266 4737.793697 4556.980055 5026.574881 5189.542621 4933.753902 4781.725151 4589.554528 4479.456129 1.151172923 1.135051917 1.057671637 1.017306549 1.122139549 1.158520694 1.101418065 1.067478956 1.024578519 1 12.12910786 -8.173080532 1.99099152 1.003226106 1.104508184 0.465931041 0.04031258 0.345012332 2.441499074 0.041148543 0.012450503 6.71E-09 8.173080532 0.101282078 SSQQPST(ph)PQQAPPGQPQQGTFVAHK ddPTM_A459_MK2206_30min_R2 3 SSQQPSTPQQAPPGQPQQGTFVAHK 25 0 E7ERS3;Q86VM9;H3BRH3 E7ERS3;H3BRH3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 S(0.04)S(0.04)QQPS(0.437)T(0.483)PQQAPPGQPQQGTFVAHK;S(0.018)S(0.018)QQPS(0.202)T(0.762)PQQAPPGQPQQGTFVAHK;S(0.001)S(0.001)QQPS(0.248)T(0.75)PQQAPPGQPQQGTFVAHK 198.69 7.02E-31 100075000 133296 178637 153222 188028 158398 163454 174216 149620 145718 152163 TRUE FALSE 143501.2442 169766.1463 158330.345 172665.5109 152178.4986 169674.3565 151341.2299 169175.8477 158392.2882 147197.9338 0.974886268 1.153318814 1.075628855 1.17301586 1.033835834 1.152695233 1.028147787 1.149308576 1.076049671 1 17.16739789 -8.549125368 22.32259309 0.999999998 1.095766009 0.163354836 0.062299755 3023.900439 2571806.267 0.054385984 0.014042401 2.82E-09 8.549125368 0.095766011 SSQSEGIFLGS(ph)ESDEDSVR ddPTM_A459_MK2206_30min_R1 1 SSQSEGIFLGSESDEDSVR 19 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 SSQSEGIFLGS(0.985)ES(0.015)DEDSVR 145.73 4.85E-05 0 207.4 203.25 211.93 341.11 266.15 366.08 239.91 121.18 314.27 317.8 TRUE FALSE 189.7595409 190.0183881 197.5447821 367.3823513 255.5486819 386.8071332 223.9060416 120.120536 346.9394911 357.1714633 0.53128416 0.532008874 0.55308109 1.028588197 0.715479002 1.08297323 0.626886705 0.336310563 0.971352773 1 8.480473009 -5.607291016 13.14368226 0.793574452 0.534372776 0.264342697 0.213585975 1.084340348 164.4386256 0.059479362 0.103030021 2.47E-06 5.607291016 -0.259201676 SSQTGTEPGAAHTS(ph)SPQPSTSR ddPTM_A459_MK2206_30min_R1 3 SSQTGTEPGAAHTSSPQPSTSR 22 0 A0A075B6T1;Q9C0C7-4;Q9C0C7-2;Q9C0C7-3;Q9C0C7;Q9C0C7-5;H0YE34 A0A075B6T1 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 1 SSQTGTEPGAAHT(0.009)S(0.492)S(0.492)PQPS(0.003)T(0.003)S(0.003)R;SSQTGTEPGAAHT(0.029)S(0.457)S(0.457)PQPS(0.01)T(0.01)S(0.037)R;SSQTGTEPGAAHT(0.026)S(0.482)S(0.482)PQPS(0.002)T(0.002)S(0.007)R 187.09 8.78E-22 4854500 2092.39 1807.32 1672.9 1147.13 2931.72 2862 3155.39 2233.89 1414.88 1861.44 TRUE FALSE 1914.421243 1689.66314 1559.348209 1235.482151 2814.943384 3024.043967 2944.89969 2214.359335 1561.961839 2092.04924 0.915093778 0.807659355 0.745368789 0.590560742 1.345543561 1.445493686 1.407662704 1.058464252 0.746618105 1 11.03070109 -6.263576938 24.99775573 1.196148382 0.766362578 0.463851703 0.210692284 179.8766646 2103571.127 0.070115269 0.083461299 5.45E-07 6.263576938 -0.429785804 SSQTGTEPGAAHTSS(ph)PQPSTSR ddPTM_A459_MK2206_30min_R1 2 SSQTGTEPGAAHTSSPQPSTSR 22 0 A0A075B6T1;Q9C0C7-4;Q9C0C7-2;Q9C0C7-3;Q9C0C7;Q9C0C7-5;H0YE34 A0A075B6T1 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 1 SSQTGTEPGAAHT(0.001)S(0.344)S(0.635)PQPS(0.007)T(0.007)S(0.007)R;SSQTGTEPGAAHT(0.001)S(0.122)S(0.358)PQPS(0.08)T(0.08)S(0.358)R 172.1 2.82E-12 5942100 921.54 570.05 812.16 824.89 1405.78 1512.01 1417.88 1323.1 830.19 746.03 TRUE FALSE 843.1581838 532.9396414 757.032842 888.4231707 1349.784806 1597.6187 1323.295812 1311.532276 916.4912214 838.4538286 1.00561075 0.635621931 0.902891508 1.059597011 1.609849892 1.905434318 1.578257224 1.56422719 1.093072976 1 9.71158753 -6.07018302 3.18017716 1.5134862 0.834597918 0.523173984 0.262446415 0.18628935 3.682966548 0.081269415 0.113617129 8.51E-07 6.07018302 -0.678888282 SSRAQS(ph)KR ddPTM_A459_MK2206_30min_R2 1 SSRAQSKR 8 2 Q9NYN1-3;Q9NYN1-2;Q9NYN1 Q9NYN1-3 RASL12 Ras-like protein family member 12 1 SSRAQS(1)KR 57.047 0.042256 1784800 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 SSS(ph)ADSLSTTK ddPTM_A459_MK2206_30min_R2 1 SSSADSLSTTK 11 0 Q9UQ84;Q9UQ84-4;H0YAZ2 Q9UQ84 EXO1 Exonuclease 1 1 S(0.024)S(0.024)S(0.952)ADSLSTTK 134.75 0.0015689 8594300 58341 60951 61102 61593 60084 50935 68582 55593 48685 57401 TRUE FALSE 62807.63182 57924.26197 63139.11018 56560.65487 57724.80026 52873.36712 59577.10102 62859.19598 52919.5333 55528.01007 1.131098192 1.043153931 1.137067763 1.018596827 1.039561839 0.952192723 1.072919792 1.132026808 0.953024127 1 15.76092808 -5.77696965 24.99660947 1.029236136 1.097711363 0.296702072 0.055617295 331.8693124 534156.849 0.015699885 0.02337866 1.67E-06 5.77696965 0.068475227 SSS(ph)ALDSPAGPR ddPTM_A459_MK2206_30min_R1 1 SSSALDSPAGPR 12 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 SS(0.002)S(0.998)ALDSPAGPR 202 2.14E-21 0 1695.5 2674.1 2451.3 2166.7 2592.8 2348.9 2835.7 2259.6 2126 2042.6 TRUE FALSE 1551.288822 2500.015604 2284.912586 2333.579609 2489.523286 2481.892688 2646.535627 2239.844555 2347.005308 2295.652709 0.675750655 1.089021695 0.995321538 1.016521184 1.084451179 1.081127245 1.15284669 0.975689636 1.022369498 1 11.16468869 -4.757666941 24.99998939 1.048687622 0.675750123 0.820242937 0.052040166 45.07225675 298651.2648 0.013361785 0.097520551 1.75E-05 4.757666941 -0.372937498 SSS(ph)ALDSPAGPR ddPTM_A459_MK2206_30min_R2 1 SSSALDSPAGPR 12 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 S(0.04)S(0.142)S(0.748)ALDS(0.07)PAGPR 90.434 0.024414 18624000 25781 35627 29378 41193 28566 39839 40934 34951 33046 34021 TRUE FALSE 27754.81318 33857.81499 30357.44786 37827.40013 27444.35531 41355.10106 35559.31663 39519.2157 35920.28135 32910.89756 0.843332004 1.028772155 0.922413246 1.149388286 0.833898719 1.256577734 1.080472405 1.200794224 1.091440344 1 15.00627775 -6.764284896 24.99999995 1.135570031 0.968554835 0.383308264 0.107017989 78.34950735 688353.2232 0.034496821 0.031776625 1.72E-07 6.764284896 -0.167015196 SSS(ph)APLIHGLSDLSQVFQPYTLR ddPTM_A459_MK2206_30min_R1 2 SSSAPLIHGLSDLSQVFQPYTLR 23 0 G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-2;Q7Z309 G1UD79;Q7Z309-2 SPACIA2;FAM122B Protein FAM122B 1 S(0.303)S(0.303)S(0.393)APLIHGLSDLSQVFQPYTLR;S(0.026)S(0.026)S(0.948)APLIHGLSDLSQVFQPYTLR 224.37 2.42E-27 88615000 5378.8 4510.4 5125.6 4127 5933.4 4962.9 5767.8 6132.5 4322.82 4410.5 TRUE FALSE 4921.304815 4216.77214 4777.688553 4444.862255 5697.060114 5243.895109 5383.040586 6078.884199 4772.192608 4956.906038 0.992817854 0.850686317 0.96384489 0.89670093 1.149317754 1.057896815 1.085967849 1.226346466 0.962736145 1 12.2752242 -6.254713662 24.84401554 1.090850312 0.923334362 0.484942246 0.077466499 379.2035112 1400732.264 0.021790533 0.02746725 5.56E-07 6.254713662 -0.167515949 SSS(ph)APNVHINTIEPVNIDDLIR ddPTM_A459_MK2206_30min_R1 2 SSSAPNVHINTIEPVNIDDLIR 22 0 H7C560;A0A2R8Y8E0;A0A2U3TZI2;P15056;A0A2R8Y679;A0A2R8Y492;A0A2R8YDP5 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(0.031)S(0.031)S(0.938)APNVHINTIEPVNIDDLIR;S(0.128)S(0.128)S(0.744)APNVHINTIEPVNIDDLIR 184.14 4.98E-17 68419000 3500.5 3120 3709 3594.6 4737.6 4805 5829 5200.1 5097.9 4927.9 TRUE FALSE 3202.764093 2916.887433 3457.243414 3871.456715 4548.89136 5077.054948 5440.158046 5154.636074 5627.844948 5538.405456 0.578282706 0.526665564 0.624230826 0.699020096 0.821335924 0.916699759 0.982260705 0.930707604 1.016148961 1 12.43525496 -6.263910178 0.944469206 0.987969499 0.537756441 0.979744889 0.025265415 0.068590879 0.130094083 0.011632945 0.018492777 5.45E-07 6.263910178 -0.450213057 SSS(ph)APNVHINTIEPVNIDDLIR ddPTM_A459_MK2206_30min_R2 4 SSSAPNVHINTIEPVNIDDLIR 22 0 H7C560;A0A2R8Y8E0;A0A2U3TZI2;P15056;A0A2R8Y679;A0A2R8Y492;A0A2R8YDP5 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(0.137)S(0.137)S(0.727)APNVHINTIEPVNIDDLIR;S(0.114)S(0.114)S(0.773)APNVHINTIEPVNIDDLIR;S(0.118)S(0.118)S(0.765)APNVHINTIEPVNIDDLIR;S(0.132)S(0.132)S(0.737)APNVHINTIEPVNIDDLIR 176.86 3.11E-16 46659200 57002.7 69022.9 62365.9 96003.7 91584.7 106128.2 118742.2 85332.5 93654.4 103877 TRUE FALSE 61366.87054 65595.32315 64445.14798 88159.89061 87988.6245 110166.983 103151.2065 96485.75074 101800.2904 100487.502 0.610691572 0.65277096 0.641325008 0.877321944 0.875617592 1.096325223 1.026507819 0.960176627 1.013064196 1 16.61665655 -5.979515692 1.415035956 1.012594013 0.615887408 0.913480977 0.049894377 0.109949972 0.446486172 0.017567559 0.032141544 1.05E-06 5.979515692 -0.396706605 SSS(ph)ASSPEMK ddPTM_A459_MK2206_30min_R1 4 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSS(0.921)AS(0.079)SPEMK;SSS(0.999)ASSPEMK;S(0.017)S(0.017)S(0.906)AS(0.047)S(0.014)PEMK;S(0.023)S(0.023)S(0.852)AS(0.079)S(0.023)PEMK 141.1 0.0015418 105531900 27257 27966.3 26994.4 22701.2 21100.1 17521.7 25208.4 25100.1 8285 19862.2 TRUE FALSE 24938.64902 26145.68879 25162.09534 24449.65036 20259.63834 18513.76351 23526.79363 24880.65247 9146.255398 22322.87929 1.117178868 1.171250736 1.127188613 1.095273152 0.907572812 0.829362703 1.053931857 1.114580792 0.409725613 1 14.4462355 -6.209695571 3.38073007 0.895355812 1.138190182 0.302300683 0.180585113 0.336163006 7.782456819 0.055613009 0.071687379 6.17E-07 6.209695571 0.24283437 SSS(ph)ASSPEMK ddPTM_A459_MK2206_30min_R2 3 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SS(0.005)S(0.994)ASSPEMK;S(0.01)S(0.099)S(0.889)AS(0.001)SPEMK;SS(0.004)S(0.995)AS(0.001)SPEMK 159.09 0.00046461 101829000 194429 245697 210200 218209 196855 221000 229142 158498 209912 201293 TRUE FALSE 209314.6337 233496.0443 217207.9631 200380.6267 189125.4836 229410.3099 199055.3802 179214.2328 228169.7663 194724.8259 1.074925258 1.199107732 1.115461072 1.029045094 0.971244846 1.178125639 1.022239354 0.920346093 1.171754887 1 17.5710773 -5.660416475 4.712029662 1.040558368 1.141188134 0.200584388 0.080855918 0.311571009 11.61601705 0.021805615 0.038573746 2.19E-06 5.660416475 0.100629765 SSS(ph)DMDLQK ddPTM_A459_MK2206_30min_R1 1 SSSDMDLQK 9 0 A0A0U1RQE4;Q5HYK7-2;Q5HYK7;Q5HYK7-3;A0A494C1M0 A0A0U1RQE4;A0A494C1M0 SH3D19 SH3 domain-containing protein 19 1 S(0.002)S(0.002)S(0.996)DMDLQK 140.78 0.0022637 4408000 2956.5 1965.7 3040.2 2327.6 2707.8 2698.6 3004.2 2464.1 2817 2793.6 TRUE FALSE 2705.03415 1837.732573 2833.839694 2506.872155 2599.942592 2851.3924 2803.795299 2442.556633 3109.837231 3139.692259 0.861560283 0.585322516 0.902585177 0.798445182 0.828088353 0.908175759 0.893015961 0.777960524 0.990491097 1 11.61640744 -1.522878753 0.081695041 1.142568277 0.051928409 0.363158737 0.090478011 194.2041619 1.15849355 2.279454482 23.87026657 0.029999999 1.522878753 -1.090639868 SSS(ph)DTNESEIK ddPTM_A459_MK2206_30min_R2 1 SSSDTNESEIK 11 0 H0YAV1;Q7LG56-5;Q7LG56;Q7LG56-6 H0YAV1 RRM2B Ribonucleoside-diphosphate reductase subunit M2 B 1 S(0.045)S(0.179)S(0.776)DTNESEIK 154.1 0.0015561 0 40178 37683 43961 42684 42139 34621 46859 33377 33216 42202 TRUE FALSE 43254.05857 35811.71702 45426.6378 39196.58066 40484.41113 35938.52642 40706.35701 37739.4885 36105.06764 40824.9522 1.059500532 0.877201689 1.112717477 0.960113327 0.991658507 0.880307863 0.997095032 0.924422111 0.884387261 1 15.31716358 -6.567696351 20.78534693 0.936228281 0.998143179 0.175467262 0.068330573 43.27529401 20068.65699 0.021374736 0.021374525 2.71E-07 6.567696351 0.061914899 SSS(ph)EDAESLAPR ddPTM_A459_MK2206_30min_R1 2 SSSEDAESLAPR 12 0 Q4G0J3;Q4G0J3-3;H0YA82 Q4G0J3 LARP7 La-related protein 7 1 S(0.134)S(0.022)S(0.844)EDAESLAPR;S(0.011)S(0.015)S(0.973)EDAESLAPR 184.98 0.00010448 122382000 4089 4865.6 3775.5 3868.9 3549.5 3602.3 3767.5 3830.5 3409.3 3144.43 TRUE FALSE 3741.209078 4548.848556 3519.229579 4166.883348 3408.115899 3806.259113 3516.176949 3797.010342 3763.708935 3533.985728 1.058637291 1.287172305 0.995824503 1.179088901 0.96438304 1.07704428 0.99496071 1.074427186 1.065004 1 11.7870805 -5.732362361 1.328633041 1.037621292 1.158661539 0.210323748 0.08263569 0.66138831 2.308491326 0.026052775 0.067088869 1.85E-06 5.732362361 0.121040247 SSS(ph)EDAESLAPR ddPTM_A459_MK2206_30min_R2 2 SSSEDAESLAPR 12 0 Q4G0J3;Q4G0J3-3;H0YA82 Q4G0J3 LARP7 La-related protein 7 1 S(0.24)S(0.041)S(0.718)EDAESLAPR;S(0.338)S(0.056)S(0.606)EDAESLAPR 176.99 0.00010361 317670000 225981 264049 194749 278640 227807 184471 209727 187476 203173 190571 TRUE FALSE 243282.2791 250936.7106 201241.8345 255874.2207 218862.1525 191491.1732 182189.593 211979.7569 220844.6203 184352.6839 1.319656834 1.36117742 1.091613261 1.387960377 1.187192657 1.038721917 0.988266561 1.149859891 1.197946326 1 17.49210889 -6.542763455 5.178639097 1.080691117 1.282343039 0.530693671 0.095218375 0.155244584 11.83476632 0.031916016 0.032910477 2.87E-07 6.542763455 0.201651922 SSS(ph)EITLSECDAEDAGEPR ddPTM_A459_MK2206_30min_R1 3 SSSEITLSECDAEDAGEPR 19 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 SS(0.002)S(0.998)EITLSECDAEDAGEPR;SSS(1)EITLSECDAEDAGEPR;SSS(1)EITLSECDAEDAGEPR 358.85 1.50E-216 124013000 4156.72 3549.03 4091.1 3167.92 4250.7 3775.9 3872.5 3839.7 3044.6 2886.42 TRUE FALSE 3803.169136 3317.987502 3813.40753 3411.913747 4081.385618 3989.688195 3614.172591 3806.129908 3361.097065 3244.011501 1.172366108 1.022803865 1.175522198 1.051757599 1.258129207 1.229862531 1.114105973 1.173278796 1.036092833 1 11.66356322 -8.379134528 4.144691481 1.002294339 1.148097327 0.373909707 0.068651539 0.245526357 6.647776965 0.066951609 0.017651672 4.18E-09 8.379134528 0.145802988 SSS(ph)EITLSECDAEDAGEPR ddPTM_A459_MK2206_30min_R2 4 SSSEITLSECDAEDAGEPR 19 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 S(0.001)S(0.002)S(0.997)EITLSECDAEDAGEPR;S(0.006)S(0.01)S(0.984)EITLSECDAEDAGEPR;S(0.01)S(0.01)S(0.976)EIT(0.003)LSECDAEDAGEPR;SS(0.01)S(0.99)EITLSECDAEDAGEPR 363.27 7.64E-217 318610000 78459 85543 89737.4 95684 96989 93147 92943 75037.8 85694 91520 TRUE FALSE 84465.88136 81295.05901 92729.20013 87866.31112 93180.72453 96691.77436 80739.47246 84845.4981 93147.50922 88533.7099 0.954053337 0.918238478 1.047388619 0.992461642 1.052488647 1.092146421 0.911963054 0.958341158 1.052113476 1 16.43393926 -5.253109045 24.97473591 1.011718214 0.936145901 0.275868116 0.049984766 843.6492307 2529285.339 0.01342411 0.034198512 5.58E-06 5.253109045 -0.075572312 SSS(ph)ESYTQSFQSR ddPTM_A459_MK2206_30min_R1 2 SSSESYTQSFQSR 13 0 Q9BTU6;E9PAM4 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 1 S(0.027)S(0.003)S(0.969)ESYTQSFQSR;S(0.026)S(0.004)S(0.969)ES(0.001)YTQSFQSR 306.14 7.92E-75 58399000 5246.3 4249.3 3169.3 3220 5762.9 4306.7 5222.5 5633 5369.8 4149.2 TRUE FALSE 4800.074636 3972.669798 2954.176746 3468.004958 5533.35149 4550.541632 4874.116554 5583.751275 5928.009926 4663.234221 1.02934453 0.851912988 0.633503832 0.743690922 1.186590943 0.975833813 1.045222334 1.197398846 1.271222856 1 12.18711518 -6.259906841 24.99969525 1.112363073 0.804340965 0.571630099 0.12629503 107.2915042 1750201.697 0.040702718 0.04978865 5.50E-07 6.259906841 -0.308022107 SSS(ph)ESYTQSFQSR ddPTM_A459_MK2206_30min_R2 1 SSSESYTQSFQSR 13 0 Q9BTU6;E9PAM4 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 1 S(0.003)S(0.082)S(0.457)ES(0.457)YT(0.001)QSFQSR 160.46 0.00036396 35944000 34773 34639 34373 36420 23924 36043 42501 23925 43514 32836 TRUE FALSE 37435.24762 32918.87763 35518.97866 33444.3695 22984.62355 37414.64162 36920.56765 27052.07965 47298.76906 31764.56401 1.178522318 1.036339665 1.118195063 1.052883002 0.723593233 1.177873608 1.162319358 0.851643348 1.489041973 1 14.9551306 -8.251534607 24.9920459 1.244521013 1.039177098 0.178677093 0.177369878 1011.33442 2551847.748 0.118026168 0.043472606 5.60E-09 8.251534607 -0.205343915 SSS(ph)ETILSSLAGSDIVK ddPTM_A459_MK2206_30min_R1 2 SSSETILSSLAGSDIVK 17 0 Q01850 Q01850 CDR2 Cerebellar degeneration-related protein 2 1 S(0.073)S(0.073)S(0.853)ETILSSLAGSDIVK;S(0.001)S(0.015)S(0.984)ETILSSLAGSDIVK 379.99 1.06E-247 109738000 7835.7 7529.3 7320.4 6997.5 8283.6 6434.7 7482.9 7391.7 6946.7 5993.1 TRUE FALSE 7169.232568 7039.141201 6823.511644 7536.448662 7953.646671 6799.027153 6983.729394 7327.075146 7668.834324 6735.570474 1.06438387 1.045069787 1.013056232 1.1189028 1.180842321 1.009421129 1.036843044 1.087818051 1.138557507 1 12.71758443 -5.756582464 24.99921161 1.084669962 1.041259951 0.104009126 0.054587798 283.9721926 1461623.872 0.015540319 0.025851271 1.75E-06 5.756582464 -0.043410011 SSS(ph)ETILSSLAGSDIVK ddPTM_A459_MK2206_30min_R2 4 SSSETILSSLAGSDIVK 17 0 Q01850 Q01850 CDR2 Cerebellar degeneration-related protein 2 1 S(0.002)S(0.011)S(0.865)ET(0.122)ILSSLAGSDIVK;S(0.001)S(0.044)S(0.953)ET(0.002)ILSSLAGSDIVK;S(0.237)S(0.237)S(0.519)ET(0.007)ILSSLAGSDIVK;S(0.166)S(0.166)S(0.658)ET(0.009)ILSSLAGSDIVK 273.44 6.68E-52 49846000 146618 179269 171701 176171 178424 148277 190798 140591 139739 162555 TRUE FALSE 157843.1868 170366.7621 177425.4256 161777.2658 171418.1773 153919.7851 165745.9934 158966.7264 151893.2456 157250.8437 1.003766868 1.083407619 1.12829554 1.028784724 1.090093848 0.978816912 1.05402292 1.010911756 0.965929607 1 17.26270823 -6.758104803 24.99904966 1.00587364 1.069085207 0.414442571 0.038404175 92.58480183 694101.0949 0.012981666 0.012471277 1.75E-07 6.758104803 0.063211567 SSS(ph)FGSVSTSSNSSK ddPTM_A459_MK2206_30min_R1 4 SSSFGSVSTSSNSSK 15 0 E5RG30;E5RJ65;E5RHF1;E5RGS8;E5RH07;E5RGQ6;A0A0C4DGW2;P57768-2;P57768 E5RG30 SNX16 Sorting nexin-16 1 S(0.002)S(0.073)S(0.926)FGSVSTSSNSSK;SS(0.012)S(0.988)FGSVSTSSNSSK;S(0.001)S(0.065)S(0.933)FGS(0.001)VSTSSNSSK;S(0.001)S(0.066)S(0.932)FGS(0.001)VSTSSNSSK 266.15 1.43E-37 18794200 6068 6116.5 7124.4 6987 8800.3 8740.4 10015.7 9580.1 9244.2 7857.3 TRUE FALSE 5551.884736 5718.314738 6640.815578 7525.139951 8449.765416 9235.273895 9347.570928 9496.342196 10205.16767 8830.721644 0.628701137 0.647547841 0.752012785 0.852154586 0.956860125 1.045811913 1.058528544 1.075375556 1.155643682 1 13.10831562 -5.960034799 0.862541932 1.087137809 0.598071132 0.957522723 0.036537322 0.121728203 0.179601778 0.016342916 0.040288297 1.10E-06 5.960034799 -0.489066677 SSS(ph)FGSVSTSSNSSK ddPTM_A459_MK2206_30min_R2 2 SSSFGSVSTSSNSSK 15 0 E5RG30;E5RJ65;E5RHF1;E5RGS8;E5RH07;E5RGQ6;A0A0C4DGW2;P57768-2;P57768 E5RG30 SNX16 Sorting nexin-16 1 SS(0.19)S(0.81)FGSVSTSSNSSK;S(0.017)S(0.017)S(0.966)FGSVSTSSNSSK 253.06 2.65E-28 18277900 41330 62326 72797 81290 86134 94010 115865 91391 102865 99145 TRUE FALSE 44494.25658 59230.98147 75224.01565 74648.34697 82751.94637 97587.61643 100651.7863 103336.1175 111812.0118 95909.90677 0.463917212 0.617568961 0.784319558 0.778317376 0.862809163 1.017492559 1.049440978 1.077429027 1.165802528 1 16.54939222 -5.384255017 0.480206602 1.110549977 0.264229981 0.929411869 0.05601032 0.671238952 0.181547243 0.042182423 0.302692916 4.13E-06 5.384255017 -0.846319996 down SSS(ph)FHDDHFLSR ddPTM_A459_MK2206_30min_R1 3 SSSFHDDHFLSR 12 0 J3QQV3;Q8N8E3 J3QQV3 CEP112 Centrosomal protein of 112 kDa 1 S(0.113)S(0.113)S(0.774)FHDDHFLSR;S(0.063)S(0.063)S(0.875)FHDDHFLSR;S(0.042)S(0.042)S(0.916)FHDDHFLSR 111.66 0.0044346 14587800 7207.7 4593.2 5319 4393.4 8307.3 7521.6 7514.5 6526.6 4622.3 4248.15 TRUE FALSE 6594.647266 4294.181845 4957.9611 4731.780429 7976.40265 7947.466492 7013.221416 6469.538624 5102.804626 4774.442894 1.381239113 0.899410034 1.038437617 0.99106441 1.670645733 1.664585098 1.468908849 1.355035293 1.068774879 1 12.22111669 -6.239589401 24.65441659 1.408618959 1.06202148 0.26206565 0.236025378 827.7682957 934011.8599 0.070987057 0.091557961 5.76E-07 6.239589401 -0.346597479 SSS(ph)FHDDHFLSR ddPTM_A459_MK2206_30min_R2 4 SSSFHDDHFLSR 12 0 J3QQV3;Q8N8E3 J3QQV3 CEP112 Centrosomal protein of 112 kDa 1 S(0.03)S(0.1)S(0.87)FHDDHFLSR;S(0.106)S(0.106)S(0.789)FHDDHFLSR;S(0.101)S(0.101)S(0.798)FHDDHFLSR;S(0.114)S(0.114)S(0.772)FHDDHFLSR 147.7 0.00041192 28551800 73425 101230 85836 119178 116629 113357 111087 96985 94254 114267 TRUE FALSE 79046.47445 96203.0654 88697.7294 109440.7762 112049.5594 117670.8801 96501.14346 109661.2725 102452.0425 110538.4771 0.715103704 0.870312925 0.802414975 0.990069512 1.013670193 1.064524165 0.873009525 0.99206426 0.92684507 1 16.75418912 -5.759678848 24.98440916 0.980159025 0.80338073 0.666831883 0.059557681 28.05346353 398104.2391 0.016394654 0.026618728 1.74E-06 5.759678848 -0.176778295 SSS(ph)FSELCHR ddPTM_A459_MK2206_30min_R2 1 SSSFSELCHR 10 0 Q5T8I3-2;Q5T8I3 Q5T8I3-2 FAM102B Protein FAM102B 1 S(0.267)S(0.267)S(0.465)FSELCHR 171.92 0.00010575 2545400 7162.1 11489 9671.7 14237 13357 12399 11229 9852.8 10525 9265.4 TRUE FALSE 7710.435883 10918.47297 9994.149651 13073.79156 12832.53707 12870.85263 9754.618812 11140.59479 11440.44548 8963.070757 0.860244897 1.218162086 1.115036344 1.458628623 1.431712124 1.435986949 1.088312151 1.242943974 1.276397987 1 13.12977737 -4.29712253 1.389460709 1.281490716 6.36E-11 0.380218964 0.14891168 4.36191632 3.028444779 0.043449504 10.89964917 5.05E-05 4.29712253 -1.281490716 SSS(ph)FSLPSR ddPTM_A459_MK2206_30min_R1 3 SSSFSLPSR 9 0 Q14153-2;Q14153 Q14153-2 FAM53B Protein FAM53B 1 S(0.012)S(0.007)S(0.944)FS(0.037)LPSR;S(0.002)S(0.001)S(0.918)FS(0.079)LPSR;S(0.001)S(0.001)S(0.96)FS(0.038)LPSR 136.96 0.0025948 26544600 7524.5 7345 7623.2 6530.7 8042.2 6838.1 8721.9 7598 7333.1 7156.7 TRUE FALSE 6884.501762 6866.839165 7105.758423 7033.695646 7721.862144 7225.267313 8140.077965 7531.571487 8095.401987 8043.326026 0.85592723 0.853731298 0.883435335 0.874476009 0.960033464 0.898293478 1.012028847 0.936375258 1.006474431 1 12.97357648 -6.441479351 0.51877825 0.998954726 0.835466148 0.762606415 0.029210654 0.514491825 0.286372742 0.022762831 0.040410568 3.62E-07 6.441479351 -0.163488578 SSS(ph)FSLPSR ddPTM_A459_MK2206_30min_R2 1 SSSFSLPSR 9 0 Q14153-2;Q14153 Q14153-2 FAM53B Protein FAM53B 1 S(0.003)S(0.002)S(0.919)FS(0.076)LPSR 132.32 0.0033917 8257700 25369 34033 31040 40197 35081 33864 36078 37642 33657 32932 TRUE FALSE 27311.27015 32342.97071 32074.85811 36912.77652 33703.54367 35152.71825 31340.91526 42561.93864 36584.42502 31857.43154 0.857296675 1.015241002 1.006824987 1.158686521 1.057949183 1.103438556 0.983786632 1.336012873 1.148379617 1 14.95934234 -3.63140108 0.596359568 1.129023415 8.04E-12 0.38896268 0.095894791 13.04281245 1.232815877 0.045204013 13.78765651 0.000233668 3.63140108 -1.129023415 SSS(ph)KESLVR ddPTM_A459_MK2206_30min_R1 1 SSSKESLVR 9 1 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 S(0.001)S(0.017)S(0.982)KES(0.001)LVR 142.1 0.010204 87333000 5060.9 5371.4 5191.5 4855.3 4321.1 2876.6 4568 4895.1 4249.3 4186.2 TRUE FALSE 4630.443879 5021.720884 4839.115444 5229.256047 4148.981437 3039.470606 4263.277055 4852.302657 4691.029941 4704.81806 0.984191911 1.067357084 1.02854465 1.111468282 0.881857998 0.646033612 0.906151311 1.031347566 0.997069362 1 12.19992322 -6.272908136 24.60229995 0.898545594 1.047899108 0.287014946 0.105160724 804.6351347 1726066.316 0.035845888 0.041006498 5.33E-07 6.272908136 0.149353514 SSS(ph)LDALGPTR ddPTM_A459_MK2206_30min_R2 1 SSSLDALGPTR 11 0 Q9H425-2;Q9H425-3;Q9H425;E5RI90 Q9H425-2 C1orf198 Uncharacterized protein C1orf198 1 SS(0.018)S(0.982)LDALGPTR 155.99 0.00054142 7769200 29252 19245 25703 26034 25129 34865 34712 28118 31269 25367 TRUE FALSE 31491.55561 18289.32128 26559.92519 23906.93892 24142.3092 36191.81201 30154.2727 31793.11914 33988.7211 24539.27687 1.283312291 0.745308078 1.082343434 0.974231598 0.983823172 1.474852425 1.228816679 1.295601305 1.385074274 1 14.58280512 -6.738980307 24.94194107 1.292340754 1.000496485 0.375564166 0.168579896 213.4697565 237068.4579 0.051765445 0.051728159 1.82E-07 6.738980307 -0.29184427 SSS(ph)LDGEHHDGYHR ddPTM_A459_MK2206_30min_R1 1 SSSLDGEHHDGYHR 14 0 Q9C0J8 Q9C0J8 WDR33 pre-mRNA 3 end processing protein WDR33 1 S(0.176)S(0.176)S(0.648)LDGEHHDGYHR 91.657 0.015503 0 602.82 608.5 562.36 419.75 589.16 534.98 577.34 747.79 390.67 408.31 TRUE FALSE 551.5469935 568.8865394 524.18857 452.0792177 565.6925096 565.2701053 538.826702 741.2521509 431.2815445 458.8945254 1.201903625 1.239689096 1.142285517 0.985148422 1.232728826 1.231808344 1.174184202 1.615299617 0.939827173 1 8.842018785 -6.418196399 20.04307907 1.230204807 1.144181846 0.005634033 0.180696223 24.63796517 4692.657996 0.054361761 0.06164042 3.82E-07 6.418196399 -0.08602296 SSS(ph)LDGEHHDGYHR ddPTM_A459_MK2206_30min_R2 2 SSSLDGEHHDGYHR 14 0 Q9C0J8 Q9C0J8 WDR33 pre-mRNA 3 end processing protein WDR33 1 S(0.309)S(0.309)S(0.382)LDGEHHDGYHR;S(0.31)S(0.31)S(0.381)LDGEHHDGYHR 66.387 0.036122 18749900 13415.1 14192.8 13899.2 12781.8 16544.5 8369.9 14120.1 13303.6 13521.6 13101.2 TRUE FALSE 14442.17037 13488.00619 14362.59239 11737.48605 15894.8798 8688.42241 12266.11391 15042.4262 14697.68433 12673.70892 1.139537799 1.064250905 1.133258818 0.926128739 1.254161659 0.685546943 0.967839327 1.186900086 1.159698745 1 13.62955117 -5.70622984 24.99922009 1.026468421 1.107539492 0.063976989 0.151435032 311.5239643 141056.8323 0.042310877 0.073284517 1.97E-06 5.70622984 0.081071071 SSS(ph)LDMNR ddPTM_A459_MK2206_30min_R1 4 SSSLDMNR 8 0 E9PMG1;H0YDT0;Q96D71-4;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 SS(0.001)S(0.999)LDMNR;SS(0.001)S(0.999)LDMNR;SSS(1)LDMNR;SSS(1)LDMNR 169.41 0.0001982 227501000 20523.4 19778.6 21135.9 17711.4 21874.2 18178.8 22007.4 19757.7 17222 15930.6 TRUE FALSE 18777.77706 18491.00955 19701.254 19075.5351 21002.90429 19208.06795 20539.3265 19584.96051 19012.28853 17904.203 1.048791564 1.032774793 1.100370343 1.065422186 1.173071166 1.072824518 1.147179045 1.093875026 1.061889688 1 14.12801068 -5.263957167 24.47467936 1.096295282 1.040783175 0.141069194 0.04538169 238.6864953 2320241.193 0.011156889 0.025082309 5.45E-06 5.263957167 -0.055512107 SSS(ph)LDMNR ddPTM_A459_MK2206_30min_R2 4 SSSLDMNR 8 0 E9PMG1;H0YDT0;Q96D71-4;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 SS(0.006)S(0.994)LDMNR;SS(0.021)S(0.979)LDMNR;SS(0.001)S(0.999)LDMNR;SS(0.001)S(0.999)LDMNR 156.83 0.00056044 355833000 274857 396656 349942 415754 370690 411503 392260 307396 318432 354739 TRUE FALSE 295900.2632 376958.6398 361608.8916 381785.5683 356134.848 427163.035 340755.7908 347573.7126 346128.6398 343163.8955 0.862270965 1.098479895 1.053749816 1.112545851 1.037798127 1.244778488 0.99298264 1.012850469 1.008639441 1 18.38853825 SSS(ph)LESLQTAVAEVR ddPTM_A459_MK2206_30min_R1 2 SSSLESLQTAVAEVR 15 0 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 S(0.16)S(0.16)S(0.672)LES(0.001)LQT(0.006)AVAEVR;S(0.091)S(0.091)S(0.816)LES(0.001)LQTAVAEVR 201.75 1.48E-05 10978700 2183.4 2168.3 2608.7 2093.08 2445.9 2222.7 2496.9 2631.4 2373.6 2072.2 TRUE FALSE 1997.690365 2027.143276 2431.628712 2254.289384 2348.474624 2348.547353 2330.336357 2608.393947 2620.344214 2328.91978 0.857775515 0.870422113 1.044101533 0.967954931 1.008396529 1.008427758 1.000608255 1.120001629 1.125132878 1 11.18544523 -2.994972051 0.37991572 1.069161481 1.42E-15 0.636441564 0.050515435 14.44256573 0.55735829 0.041520692 9.32555027 0.001011645 2.994972051 -1.069161481 SSS(ph)LESLQTAVAEVR ddPTM_A459_MK2206_30min_R2 2 SSSLESLQTAVAEVR 15 0 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 SS(0.009)S(0.975)LES(0.015)LQTAVAEVR;S(0.05)S(0.148)S(0.796)LES(0.006)LQTAVAEVR 247.02 7.41E-28 7445400 31789.9 29175.6 26146 33259.7 30333.7 30497.3 31436.6 25155.3 26104.5 26469 TRUE FALSE 34223.75919 27726.78213 27017.69459 30542.27612 29142.64652 31657.89612 27308.93666 28443.18408 28375.02222 25605.3187 1.336587902 1.082852452 1.055159473 1.192809841 1.138148166 1.236379695 1.066533753 1.11083109 1.108169071 1 14.6441559 -14.52287875 0.087515754 0.525177795 1.26817374 0.321283197 0.077075405 304.9423913 1.856411595 27.07769354 2.025462776 3.00E-15 14.52287875 0.742995945 SSS(ph)LESLQTAVAEVTLNGDIPFHRPR ddPTM_A459_MK2206_30min_R1 4 SSSLESLQTAVAEVTLNGDIPFHRPR 26 1 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.038)S(0.038)S(0.924)LESLQTAVAEVTLNGDIPFHRPR;S(0.033)S(0.033)S(0.781)LES(0.151)LQT(0.001)AVAEVTLNGDIPFHRPR;S(0.135)S(0.135)S(0.718)LES(0.012)LQTAVAEVTLNGDIPFHRPR;S(0.032)S(0.032)S(0.887)LES(0.049)LQTAVAEVTLNGDIPFHRPR 177.24 1.22E-21 84701300 2360.04 2524.24 2426.43 1898.63 1953.49 2426.92 2966.75 2315.53 2450.65 2786.75 TRUE FALSE 2159.306205 2359.911517 2261.730692 2044.862812 1875.678357 2564.330113 2768.843521 2295.285565 2705.403837 3131.993629 0.689435057 0.753485414 0.722137705 0.652894946 0.598876811 0.818753298 0.884051454 0.732851288 0.863796086 1 11.61286556 -6.902063785 6.913493724 0.84832019 0.68819317 0.597137366 0.072503975 0.176465537 10.73378158 0.025734832 0.022690044 1.25E-07 6.902063785 -0.16012702 SSS(ph)LESLQTAVAEVTLNGDIPFHRPRPR ddPTM_A459_MK2206_30min_R1 1 SSSLESLQTAVAEVTLNGDIPFHRPRPR 28 2 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.141)S(0.141)S(0.625)LES(0.093)LQTAVAEVTLNGDIPFHRPRPR 113.79 4.66E-11 12081000 978.61 1036.9 827.79 1023.5 1302.2 769.02 1110.1 1175 855.71 521.47 TRUE FALSE 895.3740806 969.3976215 771.6019212 1102.330147 1250.330617 812.5612478 1036.047254 1164.727099 944.6641167 586.0736405 1.52775013 1.654054294 1.31656138 1.880873104 2.133401897 1.38644906 1.767776578 1.987339164 1.611852251 1 9.194938141 -8.559416901 21.82341263 0.999999994 1.70940389 0.431807784 0.241768094 3091.961047 1846755.946 0.239961361 0.061957757 2.76E-09 8.559416901 0.709403896 SSS(ph)LGNLK ddPTM_A459_MK2206_30min_R1 1 SSSLGNLK 8 0 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6;H0YGH8 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.005)S(0.034)S(0.961)LGNLK 90.149 0.028672 15979000 6169.2 6620 6333.2 5719.4 6522.8 6183 7120.4 5775.5 7068.1 7020.6 TRUE FALSE 5644.477144 6189.036797 5903.320029 6159.909179 6262.983064 6533.076117 6645.411108 5725.005412 7802.854288 7890.364931 0.715363256 0.784379031 0.748168188 0.780687488 0.793750748 0.827981491 0.842218474 0.725569155 0.988909177 1 12.94587631 -8.271660083 24.99999999 0.994454651 0.781051297 0.837217794 0.038278376 299.2714735 732014.2942 0.036335046 0.009804943 5.35E-09 8.271660083 -0.213403354 SSS(ph)LGNLK ddPTM_A459_MK2206_30min_R2 3 SSSLGNLK 8 0 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6;H0YGH8 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.025)S(0.004)S(0.971)LGNLK;S(0.005)S(0.185)S(0.809)LGNLK;S(0.215)S(0.022)S(0.762)LGNLK 110.38 0.012048 64618000 390513 391669 359760 414353 306220 321139 452380 382400 311365 348976 TRUE FALSE 420410.9755 372219.287 371754.2188 380499.0345 294196.2642 333360.1697 392981.9626 432380.993 338446.9649 337588.9417 1.245333966 1.102581397 1.10120378 1.127107519 0.871462977 0.987473606 1.164084228 1.28079134 1.002541621 1 18.36490812 -4.113605985 1.290812691 1.070574126 1.837031487 0.202533325 0.106289919 12.53558164 5.305906205 0.033620166 19.36887252 7.70E-05 4.113605985 0.76645736 SSS(ph)LGNLKK ddPTM_A459_MK2206_30min_R2 1 SSSLGNLKK 9 1 Q86W92-2;Q86W92-4;Q86W92;Q86W92-3;F5GZP6;H0YGH8 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.012)S(0.073)S(0.914)LGNLKK 108.7 0.021297 79684000 286010 415590 353440 376190 344170 271170 403680 329020 302990 333270 TRUE FALSE 307907.1455 394952.4049 365223.5132 345454.0736 330656.1565 281489.5644 350676.3311 372024.0437 329343.5225 322395.4272 0.955060524 1.225055853 1.132843342 1.071522871 1.025622973 0.873118973 1.087721169 1.153937098 1.02155147 1 18.29847176 -6.003269205 3.863915457 1.030743802 1.11566684 0.12468071 0.090797528 0.453145498 15.21074511 0.027961641 0.040253917 9.93E-07 6.003269205 0.084923038 SSS(ph)LIQLTSQNSSPNQQR ddPTM_A459_MK2206_30min_R1 3 SSSLIQLTSQNSSPNQQR 18 0 H7C419;O95639 H7C419 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 1 SS(0.006)S(0.994)LIQLTSQNSSPNQQR;S(0.088)S(0.003)S(0.91)LIQLTSQNSSPNQQR;SSS(1)LIQLTSQNSSPNQQR 260.07 1.35E-42 8649700 1934.41 2277.84 2152.93 1774.54 2682.63 1844.49 1925.78 1987.45 1821.37 1781.37 TRUE FALSE 1769.878272 2129.552202 2006.79511 1911.215378 2575.775167 1948.92343 1797.31473 1970.073934 2010.707929 2002.059564 0.884028779 1.063680742 1.002365337 0.954624634 1.286562704 0.973459264 0.897732896 0.984023637 1.004319734 1 10.96726918 -10.14309082 10.67358674 1.000016191 1.00926007 0 0.106280336 0 0 0.104548646 0.025356771 7.19E-11 10.14309082 0.009243879 SSS(ph)LIQLTSQNSSPNQQR ddPTM_A459_MK2206_30min_R2 1 SSSLIQLTSQNSSPNQQR 18 0 H7C419;O95639 H7C419 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 1 SS(0.001)S(0.998)LIQLTSQNSSPNQQR 320.06 5.31E-127 9116800 16145 22631 15630 17616 16969 19349 20126 17192 15231 21206 TRUE FALSE 17381.07361 21507.17745 16151.0964 16176.71645 16302.7118 20085.33975 17483.43202 19439.05343 16555.76485 20514.04996 0.847276557 1.048412064 0.787318761 0.788567664 0.794709569 0.97910163 0.85226623 0.94759706 0.807045166 1 14.32432472 -6.756758739 24.99996831 0.909868343 0.85684181 0.112038962 0.088530746 349.9310038 1869029.909 0.030497531 0.029546249 1.75E-07 6.756758739 -0.053026533 SSS(ph)LPAYGR ddPTM_A459_MK2206_30min_R1 2 SSSLPAYGR 9 0 Q08495;Q08495-2;Q08495-3;Q08495-4 Q08495 DMTN Dematin 1 S(0.002)S(0.002)S(0.996)LPAYGR;S(0.001)S(0.002)S(0.997)LPAYGR 131.52 0.0035843 84208000 7922 7459 7012.1 6343.3 8129.2 6511.1 7058.7 6817.3 6103.2 5659.1 TRUE FALSE 7248.1923 6973.417744 6536.138189 6831.862065 7805.39675 6879.752855 6587.827002 6757.697065 6737.649481 6360.192032 1.139618468 1.096416226 1.027663655 1.074159716 1.227226585 1.081689487 1.035790581 1.062498904 1.059346864 1 12.63485461 -7.98379794 0.860801033 1.012734374 1.104798463 0.281991098 0.051793331 0.879991876 1.256291761 0.052064188 0.020773286 1.04E-08 7.98379794 0.092064088 SSS(ph)LPAYGR ddPTM_A459_MK2206_30min_R2 3 SSSLPAYGR 9 0 Q08495;Q08495-2;Q08495-3;Q08495-4 Q08495 DMTN Dematin 1 S(0.002)S(0.002)S(0.995)LPAYGR;S(0.005)S(0.005)S(0.99)LPAYGR;SS(0.002)S(0.998)LPAYGR 150.81 0.0012801 78675000 145119 156347 147170 178959 178193 161457 165997 141515 156152 147002 TRUE FALSE 156229.4222 148583.0353 152076.5743 164337.4772 171196.2475 167601.3593 144201.3945 160011.4964 169733.8187 142205.3368 1.098618559 1.044848518 1.069415381 1.155635091 1.203866545 1.178586986 1.014036447 1.125214426 1.193582622 1 17.11761608 -5.745097323 23.74133918 1.130602942 1.068349519 0.113981987 0.066638303 265.1142428 385145.1635 0.018341938 0.031623472 1.80E-06 5.745097323 -0.062253423 SSS(ph)LSDLTHR ddPTM_A459_MK2206_30min_R2 3 SSSLSDLTHR 10 0 Q5T9C2-3;Q5T9C2-2;Q5T9C2 Q5T9C2-3 FAM102A Protein FAM102A 1 S(0.301)S(0.301)S(0.397)LS(0.002)DLTHR;S(0.277)S(0.277)S(0.446)LSDLTHR;S(0.271)S(0.271)S(0.457)LSDLTHR 142.89 0.00076027 10496100 54996 72396 55921 89009 74598 82190 62608 57526 64338 49959 TRUE FALSE 59206.53604 68800.91991 57785.37823 81736.67997 71668.9077 85317.79804 54387.49439 65044.84572 69934.00294 48328.84192 1.225076656 1.423599598 1.195670658 1.691260885 1.48294279 1.765359869 1.12536308 1.345880496 1.447044873 1 15.5605968 -9.80791084 0.631307755 0.965530404 1.42821863 0.285220975 0.194600465 10.61396148 3.867209619 1.106844995 0.077829696 1.56E-10 9.80791084 0.462688226 SSS(ph)LTRS(ph)SAVT(ph)ARGSAPKPR ddPTM_A459_MK2206_30min_R1 1 SSSLTRSSAVTARGSAPKPR 20 3 Q9H6L2-2 Q9H6L2-2 3 S(0.118)S(0.118)S(0.412)LT(0.412)RS(0.744)S(0.197)AVT(0.589)ARGS(0.411)APKPR 52.365 0.03019 26243000 3241.8 3067.4 3209.4 2573.2 3218.7 2686.2 2973.8 2727.3 2921.8 2372.6 TRUE FALSE 2966.067887 2867.711702 2991.55487 2771.38831 3090.492363 2838.290323 2775.423228 2703.455504 3225.531566 2666.5356 1.112330128 1.075444746 1.121888217 1.039321699 1.158991601 1.064411187 1.040834867 1.013845644 1.209633791 1 11.38075087 SSS(ph)LVDIR ddPTM_A459_MK2206_30min_R2 2 SSSLVDIR 8 0 Q96Q42-3;Q96Q42 Q96Q42-3 ALS2 Alsin 1 S(0.001)S(0.003)S(0.997)LVDIR;S(0.131)S(0.131)S(0.739)LVDIR 125.68 0.0050277 7953700 118852 84024 88990 94546 71906 85096 99214 75465 67165 92146 TRUE FALSE 127951.4005 79851.49034 91956.88218 86821.28936 69082.60914 88334.38791 86187.08262 85328.53461 73006.89029 89139.28357 1.435409792 0.895805835 1.031608944 0.973995817 0.774996235 0.99097036 0.966881034 0.9572495 0.819020384 1 16.44377375 -4.758692823 24.97739087 0.935227672 1.435410469 0.789203963 0.07766227 32.60015504 296410.7423 0.019143198 0.128546063 1.74E-05 4.758692823 0.500182796 SSS(ph)MAAGLER ddPTM_A459_MK2206_30min_R1 2 SSSMAAGLER 10 0 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 SS(0.006)S(0.994)MAAGLER;SS(0.005)S(0.995)MAAGLER 139.31 0.0015418 51392000 8518 6804.7 6594.6 6602.9 9746.1 9040.2 9339.2 7977.3 6419 5813.8 TRUE FALSE 7793.49937 6361.712793 6146.976926 7111.456502 9357.892199 9552.048312 8716.199008 7907.555307 7086.278021 6534.057436 1.192750362 0.973623641 0.940759549 1.088367614 1.432171708 1.461886187 1.333964247 1.210205968 1.084514192 1 12.67376342 -6.070900774 7.120620825 1.278058187 1.026933213 0.312513199 0.147603098 0.285496641 24.84479758 0.04531471 0.058983831 8.49E-07 6.070900774 -0.251124974 SSS(ph)MAAGLER ddPTM_A459_MK2206_30min_R2 2 SSSMAAGLER 10 0 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 SS(0.005)S(0.994)MAAGLER;SS(0.003)S(0.997)MAAGLER 126.66 0.0034191 58930000 121328 161706 131788 162336 167697 186113 155603 115978 139698 115793 TRUE FALSE 130616.965 153675.9152 136181.7461 149072.6295 161112.3732 193195.6606 135172.1392 131136.7228 151848.6795 112014.6839 1.166070022 1.371926518 1.215749055 1.33083114 1.43831476 1.724735132 1.206735889 1.170710109 1.355614052 1 16.77332834 -9.047853042 0.819819039 1.000340965 1.351644854 0.280862823 0.158459448 2.498634713 2.607591752 0.176672021 0.056806607 8.96E-10 9.047853042 0.351303889 SSS(ph)MEIR ddPTM_A459_MK2206_30min_R1 1 SSSMEIR 7 0 E9PK89;Q8TBN0;Q8TBN0-2 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 1 S(0.253)S(0.253)S(0.494)MEIR 90.601 0.029436 4424800 3172.6 3320 3694.6 3553.7 5264.9 5572.6 7485.8 7167.5 6768.2 6026.2 TRUE FALSE 2902.75371 3103.867397 3443.820846 3827.40659 5055.187884 5888.115796 6986.435941 7104.835303 7471.77861 6772.771151 0.428591731 0.458286177 0.50848032 0.565116775 0.746398745 0.869380592 1.031547617 1.049029289 1.103208486 1 12.72553053 -6.577876428 0.969677458 1.071501189 0.439968122 0.986243753 0.029772435 0.053159902 0.108420517 0.015477585 0.017177676 2.64E-07 6.577876428 -0.631533068 down SSS(ph)MEIR ddPTM_A459_MK2206_30min_R2 1 SSSMEIR 7 0 E9PK89;Q8TBN0;Q8TBN0-2 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 1 S(0.097)S(0.202)S(0.701)MEIR 80.455 0.04486 7782500 38191 44292 50050 62059 64441 72012 87089 55218 70569 70738 TRUE FALSE 41114.93232 42092.52369 51718.64202 56988.58118 61910.72255 74752.46712 75654.10969 62435.18219 76706.96406 68429.82485 0.600833517 0.615119559 0.755790945 0.832803259 0.904733027 1.092396002 1.105572166 0.912397223 1.120958065 1 16.06233763 -5.887017836 0.994212552 1.046092451 0.582017128 0.878220706 0.063765987 0.197743319 0.385344105 0.026424817 0.066357522 1.30E-06 5.887017836 -0.464075323 SSS(ph)MELHR ddPTM_A459_MK2206_30min_R2 1 SSSMELHR 8 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.022)S(0.022)S(0.956)MELHR 81.525 0.043521 4271500 31755 34143 33857 43639 39104 41810 37133 29885 37809 36134 TRUE FALSE 34186.18722 32447.50827 34985.77548 40073.55411 37568.58048 43401.10885 32257.3925 33791.07211 41097.55848 34954.95054 0.978007026 0.928266462 1.000881848 1.146434296 1.074771381 1.241629817 0.922827582 0.966703474 1.17572927 1 15.09320917 -5.547635333 8.523318855 1.074651674 0.95585222 0.229603858 0.092077009 0.312350535 94.18804275 0.025584288 0.044968309 2.83E-06 5.547635333 -0.118799454 SSS(ph)MSSIDLVSASDDVHR ddPTM_A459_MK2206_30min_R1 2 SSSMSSIDLVSASDDVHR 18 0 A0A2U3TZL3;Q9Y5P4;Q9Y5P4-3;A0A0A0MRE4;A0A2R8YFA1 A0A2U3TZL3 COL4A3BP Collagen type IV alpha-3-binding protein 1 S(0.281)S(0.087)S(0.624)MS(0.008)SIDLVSASDDVHR;S(0.019)S(0.019)S(0.944)MS(0.018)SIDLVSASDDVHR 193.47 1.37E-10 13492000 4296.1 3243.7 3154.6 2420.21 4440.8 3125 3419 3453.6 2271.32 2728.3 TRUE FALSE 3930.694135 3032.53454 2940.474541 2606.614994 4263.913532 3301.934799 3190.924748 3423.405539 2507.431842 3066.302402 1.281900354 0.988987433 0.958964302 0.850084125 1.390571762 1.076845779 1.040642549 1.116460509 0.817737951 1 11.58228427 -8.249510212 24.3122292 0.908868968 1.080648884 0.17974822 0.152456748 822.5675 1676444.648 0.105920758 0.039292 5.63E-09 8.249510212 0.171779917 SSS(ph)MSSIDLVSASDDVHR ddPTM_A459_MK2206_30min_R2 5 SSSMSSIDLVSASDDVHR 18 0 A0A2U3TZL3;Q9Y5P4;Q9Y5P4-3;A0A0A0MRE4;A0A2R8YFA1 A0A2U3TZL3 COL4A3BP Collagen type IV alpha-3-binding protein 1 S(0.128)S(0.128)S(0.668)MS(0.058)S(0.018)IDLVSASDDVHR;S(0.004)S(0.034)S(0.948)MS(0.008)S(0.006)IDLVSASDDVHR;S(0.039)S(0.039)S(0.92)MS(0.002)SIDLVSASDDVHR;S(0.048)S(0.147)S(0.74)MS(0.061)S(0.004)IDLVSASDDVHR;S(0.257)S(0.086)S(0.472)MS(0.157)S(0.029)IDLVSASDDVHR 190.1 1.49E-10 17571200 61982.6 97687.3 75492.2 94862.6 98116.8 90171.6 85367.2 69040.1 74759 74225.1 TRUE FALSE 66728.03551 92836.29073 78009.07227 87112.02213 94264.24143 93603.14342 74158.3841 78063.87812 81261.40269 71803.14107 0.929319171 1.292927988 1.086429801 1.213206286 1.312815011 1.303607921 1.032801393 1.08719308 1.131724901 1 16.13175934 -7.283402651 24.65177699 1.070195925 1.196377175 0.228746388 0.113344799 1082.260248 1214733.14 0.047261159 0.031894522 5.21E-08 7.283402651 0.12618125 SSS(ph)MSSLTGAYASGIPSSSR ddPTM_A459_MK2206_30min_R1 1 SSSMSSLTGAYASGIPSSSR 20 0 Q96HA1;Q96HA1-2;Q96HA1-3 Q96HA1 POM121 Nuclear envelope pore membrane protein POM 121 1 S(0.001)S(0.004)S(0.989)MS(0.003)S(0.003)LTGAYASGIPSSSR 192.23 1.57E-15 7502100 917.45 1001.6 1056 813.92 976.15 912.94 874.01 1256 915.41 900.45 TRUE FALSE 839.4160598 936.395658 984.3216622 876.6082594 937.2678785 964.6298739 815.7063876 1245.018924 1010.570145 1012.004544 0.829458785 0.925287997 0.972645496 0.866209806 0.926149872 0.953187295 0.806030361 1.23025033 0.998582616 1 9.983000053 -7.752220663 24.99999975 1.085812375 0.903091902 0.525732701 0.077723788 135.8820296 368497.4576 0.034888017 0.019782267 1.77E-08 7.752220663 -0.182720473 SSS(ph)MSSLTGAYASGIPSSSR ddPTM_A459_MK2206_30min_R2 1 SSSMSSLTGAYASGIPSSSR 20 0 Q96HA1;Q96HA1-2;Q96HA1-3 Q96HA1 POM121 Nuclear envelope pore membrane protein POM 121 1 S(0.001)S(0.083)S(0.916)MSSLTGAYASGIPSSSR 274.45 1.99E-59 3639800 9735.3 10152 7595.1 9619.8 9691.8 12478 15459 9078 10644 11002 TRUE FALSE 10480.64205 9647.866442 7848.316843 8833.831568 9311.251235 12952.85903 13429.21473 10264.52577 11569.79588 10643.00564 0.984744574 0.906498293 0.737415455 0.830012862 0.874870459 1.217030176 1.261787805 0.964438629 1.087079747 1 13.37761801 -6.718537447 10.52546118 1.113502443 0.859418214 0.58217208 0.101199394 0.367554711 88.10343686 0.035504733 0.035415543 1.91E-07 6.718537447 -0.254084229 SSS(ph)MSSLTGAYTSGIPSSSR ddPTM_A459_MK2206_30min_R2 2 SSSMSSLTGAYTSGIPSSSR 20 0 A8CG34-2;A8CG34 A8CG34-2 POM121C Nuclear envelope pore membrane protein POM 121C 1 S(0.006)S(0.006)S(0.893)MS(0.09)S(0.005)LTGAYTSGIPSSSR;S(0.007)S(0.007)S(0.959)MS(0.026)SLTGAYTSGIPSSSR 162.37 5.45E-07 9422000 25089 27416 25737 29174 26023 34106 33388 30413 34991 32435 TRUE FALSE 27009.83313 26054.56131 26595.05873 26790.39088 25001.20626 35403.92773 29004.11549 34388.08352 38034.45393 31376.64861 0.860825943 0.830380632 0.847606737 0.853832135 0.796809327 1.12835275 0.924385388 1.095976946 1.212189817 1 14.93740364 -6.758818413 24.99954402 1.068942327 0.838899081 0.721100743 0.072838062 38.54770831 367679.9946 0.024861514 0.023788292 1.74E-07 6.758818413 -0.230043246 SSS(ph)MSYVDGFIGTWPK ddPTM_A459_MK2206_30min_R1 2 SSSMSYVDGFIGTWPK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.146)S(0.225)S(0.546)MS(0.083)YVDGFIGTWPK;S(0.102)S(0.102)S(0.794)MS(0.001)YVDGFIGTWPK 186.42 8.12E-07 54743800 6868.4 7432.7 7689.8 6358.1 7580.8 6802.8 7402 6909.6 5876.8 6007.7 TRUE FALSE 6284.206513 6948.829879 7167.837801 6847.801964 7278.840683 7187.968657 6908.226086 6849.190096 6487.71439 6751.979232 0.930720652 1.02915451 1.061590617 1.014191799 1.078030668 1.064572092 1.023140897 1.014397388 0.960861129 1 12.72109475 -8.021969208 3.334586163 0.980762501 1.032547315 0.183130566 0.039454659 0.399463493 8.915079056 0.029508667 0.010777086 9.51E-09 8.021969208 0.051784814 SSS(ph)MSYVDGFIGTWPK ddPTM_A459_MK2206_30min_R2 4 SSSMSYVDGFIGTWPK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.081)S(0.081)S(0.707)MS(0.13)YVDGFIGTWPK;S(0.001)S(0.015)S(0.979)MS(0.005)YVDGFIGTWPK;S(0.067)S(0.099)S(0.723)MS(0.112)YVDGFIGTWPK;S(0.026)S(0.021)S(0.912)MS(0.041)YVDGFIGTWPK 287.01 1.90E-74 70683300 90637 115918 101338 111149 118722 104417 122261 92869 93325 108345 TRUE FALSE 97576.23841 110161.6807 104716.5583 102067.7712 114060.3777 108390.6621 106207.9838 105007.2972 101442.2398 104809.7115 0.930984705 1.051063676 0.999111216 0.973838871 1.088261537 1.03416621 1.013341057 1.001885185 0.967870614 1 16.67741288 -3.06021373 15.14537733 1.009533139 0.547978368 0 0.042405101 0 0 0.009563031 0 0.000870535 3.06021373 -0.461554771 SSS(ph)NVNGGPELDR ddPTM_A459_MK2206_30min_R1 1 SSSNVNGGPELDR 13 0 G5E9L9;Q8N568-2;Q8N568;A0A0U1RR70;Q8N568-3 G5E9L9 DCLK2 Serine/threonine-protein kinase DCLK2 1 S(0.094)S(0.094)S(0.813)NVNGGPELDR 175.27 0.00010173 18688000 2384.1 2218.1 2538.1 2231.7 2832.3 2283.8 2378.4 2126.4 1594.6 1926.7 TRUE FALSE 2181.319776 2073.701287 2365.820844 2403.585921 2719.483494 2413.106782 2219.741276 2107.809109 1760.364376 2165.394142 1.007354612 0.957655351 1.092558993 1.109999272 1.255883832 1.114396098 1.025098033 0.973406674 0.812953329 1 11.08041393 -7.745169171 2.428151426 0.906426083 1.090558787 0.42028556 0.085193791 0.301724018 3.554181092 0.060312561 0.026656853 1.80E-08 7.745169171 0.184132704 SSS(ph)NVNGGPELDR ddPTM_A459_MK2206_30min_R2 3 SSSNVNGGPELDR 13 0 G5E9L9;Q8N568-2;Q8N568;A0A0U1RR70;Q8N568-3 G5E9L9 DCLK2 Serine/threonine-protein kinase DCLK2 1 S(0.001)S(0.013)S(0.986)NVNGGPELDR;S(0.362)S(0.053)S(0.585)NVNGGPELDR;S(0.004)S(0.103)S(0.893)NVNGGPELDR 176.29 0.00010083 56789000 95938 128683 113462 125557 136502 134540 131666 88453 105476 115344 TRUE FALSE 103283.087 122292.7893 117244.7665 115298.5915 131142.2456 139660.014 114378.096 100014.1108 114650.1118 111580.3347 0.925638799 1.096006654 1.050765502 1.033323585 1.175316833 1.251654374 1.025073964 0.896341735 1.027511811 1 16.76772326 -7.519462967 24.91907199 0.969297612 1.092927423 0.260981622 0.086580344 186.3188728 1359281.118 0.041800378 0.024785334 3.02E-08 7.519462967 0.123629811 SSS(ph)PAELDLKDDLQQTQGK ddPTM_A459_MK2206_30min_R2 2 SSSPAELDLKDDLQQTQGK 19 1 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 1 S(0.138)S(0.138)S(0.725)PAELDLKDDLQQTQGK;S(0.044)S(0.044)S(0.911)PAELDLKDDLQQTQGK 117.55 0.00025207 21117700 82979 85362 86673 83635 64451 59824 94761 70292 68497 84281 TRUE FALSE 89331.93604 81123.04721 89562.63456 76801.75296 61920.3299 62100.64424 82318.76687 79479.40575 74454.74525 81530.91787 1.095681716 0.99499735 1.0985113 0.941995441 0.759470536 0.761682143 1.009663193 0.974837618 0.913208721 1 16.31505964 -5.903923698 5.445027459 0.896065763 1.054760499 0.40513494 0.086200947 0.223755265 10.30297591 0.02660798 0.040032961 1.25E-06 5.903923698 0.158694736 SSS(ph)PAGETEGDREPQAR ddPTM_A459_MK2206_30min_R1 3 SSSPAGETEGDREPQAR 17 1 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.253)S(0.253)S(0.493)PAGET(0.001)EGDREPQAR;S(0.163)S(0.163)S(0.67)PAGET(0.003)EGDREPQAR;S(0.001)S(0.001)S(0.999)PAGETEGDREPQAR 238.67 8.24E-22 118914000 8598.4 8403.8 7902.8 6377.4 7211 8582.7 9410.1 6027.9 9003.1 10405.2 TRUE FALSE 7867.060928 7856.711093 7366.379954 6868.588453 6923.7706 9068.645057 8782.369399 5975.198706 9939.004463 11694.27473 0.672727562 0.671842527 0.629913366 0.587346254 0.592064986 0.77547734 0.750997356 0.510950772 0.849903452 1 13.51351477 -8.500626019 5.529121408 0.999696616 0.653386068 0.709939066 0.073673934 0.080232585 8.414024979 0.072860913 0.018912931 3.16E-09 8.500626019 -0.346310548 SSS(ph)PAGETEGDREPQAR ddPTM_A459_MK2206_30min_R2 1 SSSPAGETEGDREPQAR 17 1 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.094)S(0.106)S(0.754)PAGET(0.047)EGDREPQAR 68.567 0.019948 85486000 23319 24004 20034 23035 21907 23855 23466 24424 19945 25903 TRUE FALSE 25104.32057 22811.99627 20701.92356 21152.96681 21046.82111 24762.81874 20384.88601 27616.30066 21679.78005 25057.78723 1.001857041 0.910375527 0.826167266 0.844167389 0.839931352 0.98822847 0.813515009 1.102104524 0.865191321 1 14.6129714 -7.746664087 24.99985393 0.987736007 0.887753713 0.242689281 0.080848825 320.3551328 542044.1867 0.037035166 0.021269695 1.79E-08 7.746664087 -0.099982294 SSS(ph)PAPADIAQTVQEDLR ddPTM_A459_MK2206_30min_R1 25 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 SS(0.038)S(0.962)PAPADIAQTVQEDLR;SS(0.024)S(0.976)PAPADIAQTVQEDLR;S(0.009)S(0.009)S(0.982)PAPADIAQTVQEDLR;SS(0.002)S(0.998)PAPADIAQTVQEDLR;SS(0.008)S(0.992)PAPADIAQTVQEDLR;S(0.049)S(0.013)S(0.938)PAPADIAQTVQEDLR;S(0.001)S(0.023)S(0.976)PAPADIAQTVQEDLR;SS(0.029)S(0.971)PAPADIAQTVQEDLR;S(0.184)S(0.184)S(0.631)PAPADIAQTVQEDLR;S(0.046)S(0.046)S(0.908)PAPADIAQTVQEDLR;S(0.004)S(0.003)S(0.993)PAPADIAQTVQEDLR;SS(0.007)S(0.993)PAPADIAQTVQEDLR;S(0.002)S(0.002)S(0.996)PAPADIAQTVQEDLR;S(0.049)S(0.049)S(0.902)PAPADIAQTVQEDLR;S(0.002)S(0.083)S(0.915)PAPADIAQTVQEDLR;SS(0.001)S(0.999)PAPADIAQTVQEDLR;S(0.002)S(0.002)S(0.997)PAPADIAQTVQEDLR;S(0.017)S(0.017)S(0.966)PAPADIAQTVQEDLR;S(0.002)S(0.003)S(0.996)PAPADIAQTVQEDLR;SS(0.001)S(0.999)PAPADIAQTVQEDLR;S(0.006)S(0.006)S(0.988)PAPADIAQTVQEDLR;SS(0.008)S(0.992)PAPADIAQTVQEDLR;SSS(1)PAPADIAQTVQEDLR;SS(0.001)S(0.998)PAPADIAQTVQEDLR;SS(0.002)S(0.998)PAPADIAQTVQEDLR 383.17 3.84E-256 24710162700 46990.17 52878.65 51845.02 46068.73 48761.92 43851.27 47353.11 44558.21 41267.78 38923.87 TRUE FALSE 42993.40929 49436.24027 48325.92449 49616.95157 46819.62947 46334.09101 44194.27043 44168.64227 45557.71341 43746.05288 0.982795166 1.130073161 1.104692225 1.134204078 1.070259518 1.059160495 1.010245897 1.009660058 1.04141312 1 15.41686523 -6.970471167 2.167061721 1.016040832 1.091859697 0.384421227 0.040847528 0.318562281 3.018779165 0.017313965 0.013855896 1.07E-07 6.970471167 0.075818865 SSS(ph)PAPADIAQTVQEDLR ddPTM_A459_MK2206_30min_R2 40 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 S(0.012)S(0.012)S(0.976)PAPADIAQTVQEDLR;SS(0.001)S(0.999)PAPADIAQTVQEDLR;S(0.001)S(0.019)S(0.98)PAPADIAQTVQEDLR;S(0.047)S(0.008)S(0.945)PAPADIAQTVQEDLR;SS(0.037)S(0.963)PAPADIAQTVQEDLR;SS(0.017)S(0.983)PAPADIAQTVQEDLR;S(0.035)S(0.035)S(0.929)PAPADIAQTVQEDLR;S(0.006)S(0.225)S(0.769)PAPADIAQTVQEDLR;S(0.001)S(0.034)S(0.965)PAPADIAQTVQEDLR;S(0.121)S(0.121)S(0.758)PAPADIAQTVQEDLR;S(0.008)S(0.008)S(0.984)PAPADIAQTVQEDLR;S(0.073)S(0.073)S(0.853)PAPADIAQTVQEDLR;S(0.305)S(0.099)S(0.597)PAPADIAQTVQEDLR;S(0.006)S(0.056)S(0.939)PAPADIAQTVQEDLR;S(0.001)S(0.001)S(0.999)PAPADIAQTVQEDLR;S(0.108)S(0.108)S(0.785)PAPADIAQTVQEDLR;S(0.004)S(0.004)S(0.991)PAPADIAQTVQEDLR;S(0.001)S(0.018)S(0.981)PAPADIAQTVQEDLR;S(0.025)S(0.025)S(0.95)PAPADIAQTVQEDLR;S(0.006)S(0.006)S(0.987)PAPADIAQTVQEDLR;S(0.171)S(0.171)S(0.658)PAPADIAQTVQEDLR;S(0.029)S(0.094)S(0.877)PAPADIAQTVQEDLR;S(0.045)S(0.045)S(0.91)PAPADIAQTVQEDLR;S(0.099)S(0.107)S(0.794)PAPADIAQTVQEDLR;S(0.012)S(0.012)S(0.976)PAPADIAQTVQEDLR;SS(0.028)S(0.972)PAPADIAQTVQEDLR;S(0.003)S(0.054)S(0.943)PAPADIAQTVQEDLR;SSS(0.999)PAPADIAQTVQEDLR;SSS(1)PAPADIAQTVQEDLR;S(0.073)S(0.073)S(0.853)PAPADIAQTVQEDLR;S(0.002)S(0.002)S(0.996)PAPADIAQTVQEDLR;S(0.058)S(0.058)S(0.884)PAPADIAQTVQEDLR;S(0.005)S(0.005)S(0.99)PAPADIAQTVQEDLR;SSS(1)PAPADIAQTVQEDLR;S(0.037)S(0.037)S(0.925)PAPADIAQTVQEDLR;S(0.032)S(0.092)S(0.876)PAPADIAQT(0.001)VQEDLR;SS(0.188)S(0.812)PAPADIAQTVQEDLR;S(0.04)S(0.04)S(0.916)PAPADIAQT(0.003)VQEDLR;S(0.024)S(0.037)S(0.939)PAPADIAQTVQEDLR;S(0.094)S(0.094)S(0.812)PAPADIAQTVQEDLR 287 1.41E-80 18763122300 15457580.5 20988114.3 20340769.7 23620128.3 19777505.7 20543004.9 20135077.1 15387662.8 16174485 18949617.6 TRUE FALSE 16641024.75 19945875.06 21018920.81 21690288.26 19000941.45 21324783.35 17491317.29 17398883.16 17581312.47 18331293.13 0.907793282 1.088077907 1.146614189 1.183238308 1.036530337 1.163299457 0.954178037 0.949135614 0.959087411 1 24.12780522 -7.280446884 24.3219813 0.961361542 1.092323689 0.391765494 0.07425097 602.0232152 770344.3212 0.03168368 0.021405176 5.24E-08 7.280446884 0.130962147 SSS(ph)PATEQSWMENDFDELR ddPTM_A459_MK2206_30min_R1 2 SSSPATEQSWMENDFDELR 19 0 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.005)S(0.009)S(0.985)PATEQSWMENDFDELR;S(0.014)S(0.014)S(0.963)PAT(0.01)EQSWMENDFDELR 265.93 2.62E-48 14209700 1679.34 2151.12 2087.17 1290.79 1360.68 1747.9 2320.19 1299.07 2136.01 2072.96 TRUE FALSE 1536.503314 2011.081697 1945.498716 1390.206869 1306.481234 1846.864587 2165.414359 1287.712368 2358.055883 2329.773935 0.65950747 0.863208944 0.83505901 0.596713204 0.560775968 0.792722659 0.929452565 0.552719879 1.012139353 1 11.18597426 -8.288252433 24.00097499 1.006069983 0.731613718 0.449506788 0.124720667 504.4096488 451501.3932 0.123402764 0.031907899 5.15E-09 8.288252433 -0.274456265 SSS(ph)PATEQSWMENDFDELR ddPTM_A459_MK2206_30min_R2 2 SSSPATEQSWMENDFDELR 19 0 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.011)S(0.011)S(0.978)PATEQSWMENDFDELR;S(0.014)S(0.014)S(0.951)PAT(0.021)EQSWMENDFDELR 180.02 5.24E-13 4726700 42750 32339 35137 37220 32505 33746 40739 27914 24314 35885 TRUE FALSE 46022.97287 30733.09229 36308.45004 34179.00694 31228.69038 35030.22768 35389.92036 31562.45564 26428.78777 34714.07539 1.325772683 0.88532078 1.045928766 0.984586412 0.899597354 1.009107323 1.019468903 0.90921205 0.761327717 1 15.08323313 -4.755358571 24.99976154 0.95036089 1.325773297 0.665190267 0.080764884 125.7117461 516782.8682 0.020387508 0.182347324 1.76E-05 4.755358571 0.375412407 SSS(ph)PATEQSWMENDFDELREEGFR ddPTM_A459_MK2206_30min_R1 1 SSSPATEQSWMENDFDELREEGFR 24 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.381)S(0.117)S(0.458)PAT(0.019)EQS(0.025)WMENDFDELREEGFR 78.206 0.00017952 4726000 434.22 542.41 537.6 460.37 546.24 656.7 721.4 592.65 415.83 523.5 TRUE FALSE 397.2873088 507.0990104 501.1092098 495.8277772 524.4821041 693.8817865 673.2767223 587.4685235 459.0570166 588.3551322 0.67525086 0.861892729 0.851712142 0.842735535 0.891437969 1.179358772 1.144337298 0.998493072 0.780237974 1 9.200543421 -6.535884176 22.52945816 1.02893953 0.821409462 0.447590571 0.11132557 71.12266113 123203.9306 0.038911987 0.038948336 2.91E-07 6.535884176 -0.207530068 SSS(ph)PATEQSWMENDFDELREEGFR ddPTM_A459_MK2206_30min_R2 2 SSSPATEQSWMENDFDELREEGFR 24 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.168)S(0.168)S(0.512)PAT(0.126)EQS(0.026)WMENDFDELREEGFR;S(0.182)S(0.056)S(0.725)PAT(0.029)EQS(0.009)WMENDFDELREEGFR 65.801 0.0015021 6526300 4806.15 3539.38 4130.6 3646.17 5563.8 4584.97 5596.9 4182.5 3819.7 5352.5 TRUE FALSE 5174.112539 3363.619536 4268.312142 3348.266247 5345.337256 4759.454246 4862.020307 4729.167111 4151.930602 5177.848363 0.999278499 0.649617235 0.824340893 0.646652048 1.032347199 0.919195371 0.939003997 0.913346004 0.801864078 1 12.338137 -6.266903428 24.99882351 0.929440763 0.773830297 0.32653038 0.108296372 526.6462689 2409478.866 0.031778405 0.03705533 5.41E-07 6.266903428 -0.155610466 SSS(ph)PATEQSWMENDFDELREEGFRR ddPTM_A459_MK2206_30min_R1 1 SSSPATEQSWMENDFDELREEGFRR 25 2 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.119)S(0.119)S(0.498)PAT(0.26)EQS(0.003)WMENDFDELREEGFRR 48.244 0.01897 12616000 574.68 735.96 820.46 728.9 508.08 509.67 623.39 528.24 588.67 488.37 TRUE FALSE 525.8004482 688.0488702 764.7694611 785.0400043 487.8420977 538.527075 581.8047905 523.6216534 649.8643531 548.8729626 0.957963835 1.253566703 1.393345115 1.430276326 0.888806939 0.98115067 1.059998998 0.953994256 1.183997751 1 9.100328464 -6.267021365 24.99822087 1.009949489 1.268026269 0.435678913 0.137807964 444.5797857 1990991.246 0.044000991 0.051308662 5.41E-07 6.267021365 0.25807678 SSS(ph)PDLSS(ph)S(ph)S(ph)KLT(ph)ASR ddPTM_A459_MK2206_30min_R1 1 SSSPDLSSSSKLTASR 16 1 A0A2R8YCY2;A0A0C4DFX2;A0A286YFA9;A0A2R8Y5V8;Q5TBA9 A0A2R8YCY2 FRY Protein furry homolog 5 S(0.203)S(0.254)S(0.319)PDLS(0.238)S(0.995)S(0.995)S(0.995)KLT(0.96)AS(0.04)R 61.186 0.029092 2316300 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 SSS(ph)PEDPERDEEVLNHVLR ddPTM_A459_MK2206_30min_R1 1 SSSPEDPERDEEVLNHVLR 19 1 Q8TE67-2;Q8TE67;Q8TE67-3 Q8TE67-2 EPS8L3 Epidermal growth factor receptor kinase substrate 8-like protein 3 1 S(0.167)S(0.167)S(0.666)PEDPERDEEVLNHVLR 79.461 0.0037956 4901900 593.17 716.03 570.59 344.63 558.91 624.3 556.98 480.31 556.11 471.04 TRUE FALSE 542.7177766 669.4163169 531.8599406 371.1734623 536.6474312 659.6473265 519.8248805 476.1107003 613.9196246 529.3959914 1.025164122 1.264490717 1.004654265 0.701126318 1.013697572 1.24603763 0.981920696 0.899347007 1.159660509 1 9.04820346 -5.392222299 9.50562162 0.994459207 1.1443292 0.132980097 0.146588542 0.666681206 47.68756305 0.039983619 0.083355433 4.05E-06 5.392222299 0.149869992 SSS(ph)PEDPGAEV ddPTM_A459_MK2206_30min_R2 2 SSSPEDPGAEV 11 0 Q9Y5U2-2;Q9Y5U2 Q9Y5U2-2 TSSC4 Protein TSSC4 1 S(0.012)S(0.012)S(0.976)PEDPGAEV;S(0.019)S(0.019)S(0.962)PEDPGAEV 150.15 0.00061861 13571600 93975 121470 102383 146678 122113 130585 112508 101047 115728 106270 TRUE FALSE 101169.7983 115437.9764 105796.3981 134693.9382 117318.2301 135554.5037 97735.56445 114254.1898 125793.8123 102802.4186 0.984118853 1.122911095 1.029123629 1.310221491 1.141201069 1.318592554 0.950712695 1.111395932 1.223646427 1 16.64951468 -4.441472572 1.308891134 1.147161513 0.786059132 0.128608509 0.11684278 6.014403295 5.066688283 0.033669294 3.597325402 3.62E-05 4.441472572 -0.361102381 SSS(ph)PELVTHLK ddPTM_A459_MK2206_30min_R1 1 SSSPELVTHLK 11 0 E9PNR6;H0YE29;Q07960 E9PNR6 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.068)S(0.068)S(0.864)PELVTHLK 190.66 1.99E-05 25947000 10323 10390 10105 9086.8 10890 8849.1 10580 10287 9252.5 8218 TRUE FALSE 9444.974642 9713.609112 9419.100754 9786.66691 10456.22824 9350.128395 9874.227504 10197.06184 10214.33049 9236.107883 1.022614153 1.051699399 1.019812769 1.059609419 1.132103303 1.012345082 1.069089667 1.104043172 1.10591286 1 13.17306931 -5.976121226 9.750021794 1.0748821 1.034383373 0.161274874 0.039102603 0.560745636 216.0797195 0.010844127 0.015989553 1.06E-06 5.976121226 -0.040498728 SSS(ph)PELVTHLK ddPTM_A459_MK2206_30min_R2 1 SSSPELVTHLK 11 0 E9PNR6;H0YE29;Q07960 E9PNR6 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.072)S(0.269)S(0.659)PELVTHLK 122.66 0.0027033 89042000 165250 202180 180230 195200 184930 156170 197110 155040 146320 167720 TRUE FALSE 177901.6671 192140.0352 186238.7782 179251.5356 177668.719 162113.1588 171229.2202 175304.2603 159046.6491 162247.3101 1.096484539 1.18424173 1.147869743 1.10480436 1.09504878 0.999173167 1.055359378 1.080475603 0.980272949 1 17.30783503 -6.366895776 1.675990742 1.02984494 1.144974353 0.67396648 0.036002177 0.22287978 1.245752092 0.013172768 0.0162584 4.30E-07 6.366895776 0.115129413 SSS(ph)PFLSK ddPTM_A459_MK2206_30min_R2 1 SSSPFLSK 8 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.001)S(0.024)S(0.975)PFLSK 122.94 0.0061569 11081000 162650 162340 129470 161130 154440 109760 159670 141120 116670 159630 TRUE FALSE 175102.6091 154278.4317 133786.4652 147965.1636 148375.9096 113936.9937 138705.1372 159564.8685 126817.7457 154421.2862 1.133927928 0.999074904 0.866373209 0.958191498 0.960851404 0.737832177 0.898225501 1.033308765 0.821245237 1 17.23651211 -4.885870356 2.684038196 0.907838659 1.153564313 0.412773132 0.082641367 0.359380656 4.101155138 0.021507287 0.180133968 1.30E-05 4.885870356 0.245725654 SSS(ph)PGKLLGSGYGGLTGGSSR ddPTM_A459_MK2206_30min_R1 2 SSSPGKLLGSGYGGLTGGSSR 21 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.001)S(0.001)S(0.998)PGKLLGSGYGGLTGGSSR;S(0.012)S(0.012)S(0.976)PGKLLGS(0.001)GYGGLTGGSSR 174.81 1.18E-10 28092000 4314 3986.9 4563.1 6198.6 6227.8 3242.7 3228.7 6324.4 1654.27 675.83 TRUE FALSE 3947.071646 3727.352085 4253.369486 6676.017246 5979.733538 3426.298872 3013.319314 6269.106438 1826.237286 759.5569227 5.196544892 4.907271561 5.599803463 8.789357383 7.872660179 4.510917838 3.967206702 8.253636101 2.404345523 1 9.569014277 -8.437433 5.281523139 1.027468022 6.086536061 0.566896012 1.571510045 0.152451134 6.495496841 1.60793579 0.417978077 3.65E-09 8.437433 5.059068039 SSS(ph)PGKLLGSGYGGLTGGSSR ddPTM_A459_MK2206_30min_R2 1 SSSPGKLLGSGYGGLTGGSSR 21 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.053)S(0.053)S(0.892)PGKLLGSGYGGLTGGSSR 48.371 0.041289 6487700 7443.4 27266 17071 29212 40525 31907 27371 11744 58536 13444 TRUE FALSE 8013.272427 25912.01009 17640.13862 26825.28616 38933.78488 33121.24324 23777.15482 13278.98112 63627.35547 13005.32338 0.616153262 1.992415669 1.356378315 2.062638919 2.993680644 2.546745073 1.828263252 1.021041979 4.892408563 1 13.66681465 -4.761590447 0.853853259 2.347627678 1.19E-11 0.170557943 1.076207657 4.661906382 2.564042273 0.381326845 10.44634978 1.73E-05 4.761590447 -2.347627678 SSS(ph)PGKPQAVSSLNSSHSR ddPTM_A459_MK2206_30min_R1 1 SSSPGKPQAVSSLNSSHSR 19 1 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.045)S(0.045)S(0.91)PGKPQAVSSLNSSHSR 104.16 0.00051369 36469000 3061.3 1385.4 2106.4 1710.7 3124.8 3274.6 2351.7 1932.1 1292.8 1198 TRUE FALSE 2800.920359 1295.210208 1963.423437 1842.45841 3000.332599 3460.005022 2194.822384 1915.207853 1427.191186 1346.417284 2.080276592 0.9619679 1.458257748 1.368415596 2.228382414 2.569786545 1.630120475 1.422447465 1.05999173 1 10.39490989 SSS(ph)PGKPQAVSSLNSSHSR ddPTM_A459_MK2206_30min_R2 2 SSSPGKPQAVSSLNSSHSR 19 1 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.039)S(0.039)S(0.82)PGKPQAVS(0.014)S(0.014)LNS(0.035)S(0.035)HS(0.004)R;S(0.3)S(0.3)S(0.399)PGKPQAVSSLNSSHSR 86.411 0.0015338 16890500 38417.5 65135 46982 105386 79375 83525 87045 58337 73622 63155 TRUE FALSE 41358.77334 61900.49062 48548.35643 96775.62669 76258.33867 86703.6024 75615.88694 65961.8462 80025.50848 61094.25752 0.676966625 1.013196545 0.794646803 1.584038019 1.248207962 1.41917761 1.237692215 1.079673424 1.309869564 1 15.89874916 -5.737533773 24.99973454 1.275863692 0.846762374 0.580663281 0.171092729 164.4037624 171926.9266 0.045133963 0.078121931 1.83E-06 5.737533773 -0.429101318 SSS(ph)PIPLTPSK ddPTM_A459_MK2206_30min_R1 4 SSSPIPLTPSK 11 0 Q8N5Y2;Q8N5Y2-3;Q8N5Y2-2;A0A3B3IT59;Q8N5Y2-6;Q8N5Y2-4;A0A3B3ITL5;A0A3B3ITF3;A0A3F2YNX2;A0A3B3IRN2 Q8N5Y2 MSL3 Male-specific lethal 3 homolog 1 SS(0.047)S(0.953)PIPLTPSK;S(0.017)S(0.017)S(0.965)PIPLTPSK;S(0.002)S(0.082)S(0.916)PIPLTPSK;S(0.001)S(0.08)S(0.918)PIPLTPSK 173.72 0.00017348 70775000 26027.7 28916.3 30381.2 24019.8 28469.3 26048.7 29956.3 31672 30940.1 27891.7 TRUE FALSE 23813.90744 27033.84361 28319.00879 25869.80916 27335.3075 27523.55488 27957.96989 31395.09504 34156.43412 31347.13437 0.759683713 0.862402391 0.903400243 0.825268711 0.872019342 0.878024593 0.891882797 1.001529986 1.089619029 1 14.93604594 -7.755668311 2.258657622 1.048254177 0.853323536 0.792772866 0.041620157 0.134325469 1.359190011 0.027806113 0.011909671 1.76E-08 7.755668311 -0.194930641 SSS(ph)PIPLTPSK ddPTM_A459_MK2206_30min_R2 1 SSSPIPLTPSK 11 0 Q8N5Y2;Q8N5Y2-3;Q8N5Y2-2;A0A3B3IT59;Q8N5Y2-6;Q8N5Y2-4;A0A3B3ITL5;A0A3B3ITF3;A0A3F2YNX2;A0A3B3IRN2 Q8N5Y2 MSL3 Male-specific lethal 3 homolog 1 S(0.002)S(0.079)S(0.918)PIPLTPSK 166.11 0.00061395 37868000 136390 185670 170620 185030 184010 183720 223500 167760 179180 194890 TRUE FALSE 146832.1233 176449.8978 176308.3856 169912.4571 176784.8428 190711.5933 194154.1815 189686.808 194764.7525 188530.7553 0.778823185 0.935921025 0.93517042 0.9012453 0.937697632 1.011567545 1.029827633 1.006131905 1.033066208 1 17.52444037 -2.687523933 0.328652056 1.027684046 5.79E-17 0.783503525 0.034343284 13.38562777 0.38351853 0.034175418 7.229757766 0.002053412 2.687523933 -1.027684046 SSS(ph)PNSPLPMFR ddPTM_A459_MK2206_30min_R2 1 SSSPNSPLPMFR 12 0 A0A0U1RR27;Q7Z401;Q7Z401-2;H3BTW5 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.005)S(0.12)S(0.874)PNSPLPMFR 92.781 0.022922 0 10678 9282.1 9123 12207 11303 10039 12458 9905.1 8439.6 9869.2 TRUE FALSE 11495.51589 8821.164411 9427.156267 11209.64905 10859.18743 10421.04118 10822.24964 11199.73058 9173.661153 9547.168812 1.204075901 0.923956053 0.987429515 1.174133324 1.137424889 1.091532095 1.13355591 1.173094432 0.960877652 1 13.22085725 -4.457925034 21.65200743 1.075623885 4.478448243 0.177010883 0.087349997 507.7448692 178199.7465 0.021779618 4380.488496 3.48E-05 4.457925034 3.402824358 SSS(ph)PPILTKPTLK ddPTM_A459_MK2206_30min_R1 1 SSSPPILTKPTLK 13 1 A0A3F2YNX6;Q92794;A0A3B3ITI3;A0A3B3IS53 A0A3F2YNX6 KAT6A Histone acetyltransferase KAT6A 1 S(0.316)S(0.102)S(0.583)PPILTKPTLK 69.229 0.035478 19033000 7117.8 6662.7 6994.8 5442.3 6294.3 5833.6 6987.1 6100.4 6227.3 6488.9 TRUE FALSE 6512.393733 6228.957019 6520.012465 5861.466889 6043.584703 6163.893391 6521.003308 6047.064846 6874.65012 7292.793921 0.892990232 0.854124919 0.894034925 0.803734063 0.82870636 0.845203287 0.894170791 0.829183563 0.942663428 1 12.83225591 -8.462830266 3.607810554 0.999345648 0.855081353 0.724671568 0.029580454 0.106510175 2.843063231 0.028832023 0.007610991 3.44E-09 8.462830266 -0.144264295 SSS(ph)PPILTKPTLK ddPTM_A459_MK2206_30min_R2 1 SSSPPILTKPTLK 13 1 A0A3F2YNX6;Q92794;A0A3B3ITI3;A0A3B3IS53 A0A3F2YNX6 KAT6A Histone acetyltransferase KAT6A 1 S(0.036)S(0.036)S(0.927)PPILTKPTLK 99.069 0.0066227 19822000 133740 135820 130640 123150 123410 101990 142780 108120 123400 147530 TRUE FALSE 143979.2372 129075.3763 134995.4724 113088.2511 118564.3033 105871.3009 124032.8145 122251.6552 134133.1089 142716.1082 1.008850641 0.904420517 0.945902142 0.792400049 0.830770295 0.741831474 0.869087702 0.856607266 0.939859632 1 17.12278865 -4.971086273 1.321015241 0.853136258 1.029808213 0.233132428 0.072517085 1.275453029 2.523936472 0.021719907 0.277883392 1.07E-05 4.971086273 0.176671955 SSS(ph)PPPR ddPTM_A459_MK2206_30min_R2 1 SSSPPPR 7 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 SS(0.021)S(0.978)PPPR 107.29 0.016757 7322600 22573 9645.5 14890 19558 18717 18934 19069 94402 41400 28710 TRUE FALSE 24301.20624 9166.518496 15386.42517 17960.04884 17982.07653 19654.54664 16565.21739 106740.6655 45000.89717 27773.19505 0.874987778 0.330049117 0.554002704 0.646668444 0.647461572 0.707680431 0.596446227 3.843298019 1.620299612 1 14.76140554 -7.709105806 24.99789242 2.298850625 0.613756852 0.508874443 0.685303324 63.10359061 30142.19 0.296416416 0.171136048 1.95E-08 7.709105806 -1.685093774 SSS(ph)PRGEASSLNGESH ddPTM_A459_MK2206_30min_R1 4 SSSPRGEASSLNGESH 16 1 Q8IY57-3;Q8IY57;Q8IY57-5 Q8IY57-3 YAF2 YY1-associated factor 2 1 SS(0.002)S(0.996)PRGEASS(0.001)LNGESH;S(0.001)S(0.028)S(0.971)PRGEASSLNGESH;S(0.243)S(0.243)S(0.369)PRGEAS(0.003)S(0.141)LNGESH;SS(0.006)S(0.786)PRGEAS(0.203)S(0.005)LNGESH 256.35 1.19E-30 42733600 10497.9 9447.39 9776.6 10342.3 15717.1 11715.6 9901.1 12793.4 4235.68 2198.91 TRUE FALSE 9604.998478 8832.363194 9112.991631 11138.86574 15091.05463 12378.92715 9240.615685 12681.54865 4675.994094 2471.327572 3.886574402 3.573934631 3.687488351 4.507239698 6.106456626 5.009019156 3.739130251 5.131472168 1.892098056 1 11.27107054 -5.738510725 23.07438076 4.214263513 3.701791738 0 1.453943916 493.540156 496665.215 0.383679582 0.663720905 1.83E-06 5.738510725 -0.512471775 SSS(ph)PRGEASSLNGESH ddPTM_A459_MK2206_30min_R2 2 SSSPRGEASSLNGESH 16 1 Q8IY57-3;Q8IY57;Q8IY57-5 Q8IY57-3 YAF2 YY1-associated factor 2 1 S(0.029)S(0.097)S(0.837)PRGEAS(0.029)S(0.009)LNGESH;S(0.003)S(0.003)S(0.981)PRGEAS(0.012)SLNGESH 183.76 4.05E-06 10091800 10759.4 28415 17075.5 24624 37770 32182 27547 19196.2 38386 18517.5 TRUE FALSE 11583.14794 27003.95242 17644.78865 22612.14043 36286.96002 33406.70856 23930.04581 21705.20925 41724.74489 17913.27549 0.64662367 1.507482673 0.985011851 1.262311878 2.025702113 1.864913459 1.335883313 1.211682881 2.329263842 1 14.12874154 -6.028860571 12.33727612 1.636555458 1.097621878 0.284876019 0.417566449 2.025899913 865.3080745 0.119406085 0.156360611 9.36E-07 6.028860571 -0.53893358 SSS(ph)PSASLTENEVK ddPTM_A459_MK2206_30min_R1 2 SSSPSASLTENEVK 14 0 O96028-5 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 S(0.06)S(0.06)S(0.865)PS(0.015)ASLTENEVK;S(0.015)S(0.015)S(0.969)PSASLTENEVK 278.36 1.78E-54 11137200 7967.6 9051 8651.9 7624.7 7741.9 7427.6 6430.2 6891.6 7287.1 5542.6 TRUE FALSE 7289.91378 8461.778255 8064.633134 8211.955715 7433.523729 7848.144293 6001.253091 6831.347468 8044.620122 6229.259132 1.170269791 1.358392399 1.294637607 1.318287703 1.193323888 1.259884061 0.963397567 1.096654887 1.291424863 1 12.60484487 -7.136393528 8.496268135 1.096146166 1.271463341 0.452082834 0.095737419 0.294825839 19.01433726 0.036622972 0.028360843 7.30E-08 7.136393528 0.175317175 SSS(ph)PSASLTENEVK ddPTM_A459_MK2206_30min_R2 2 SSSPSASLTENEVK 14 0 O96028-5 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 SS(0.019)S(0.981)PSASLTENEVK;SS(0.003)S(0.997)PSASLTENEVK 214.58 1.08E-06 23564000 83661 89938 69653 87438 78847 54689 107999 84719 51917 78121 TRUE FALSE 90066.15048 85471.8097 71975.19626 80294.0357 75751.07061 56770.22822 93818.60157 95792.06418 56432.64682 75571.91817 1.191793892 1.130999606 0.952406635 1.062485082 1.002370622 0.751207983 1.241447933 1.267561635 0.746740961 1 16.20556262 -5.078098723 4.655663232 1.01455146 1.180154823 0.133531141 0.162298832 0.437527109 16.92410753 0.04214088 0.128106277 8.35E-06 5.078098723 0.165603363 SSS(ph)PTLTPSQEGSPVFAGFEGR ddPTM_A459_MK2206_30min_R1 2 SSSPTLTPSQEGSPVFAGFEGR 22 0 P0C860 P0C860 MSL3P1 Putative male-specific lethal-3 protein-like 2 1 S(0.018)S(0.018)S(0.681)PT(0.025)LT(0.257)PS(0.001)QEGSPVFAGFEGR;S(0.009)S(0.009)S(0.982)PTLTPSQEGSPVFAGFEGR 267.6 3.12E-65 9897600 2225.79 2027.83 1936.04 1657.02 2001.92 1586.29 2253.1 1851.96 1939.16 1558.97 TRUE FALSE 2036.474872 1895.817898 1804.626999 1784.643968 1922.179287 1676.104369 2102.79981 1835.768509 2140.742621 1752.106973 1.162300535 1.082021776 1.029975353 1.01857021 1.097067312 0.956622167 1.200154923 1.047749103 1.221810457 1 10.77487514 -7.274082713 24.98787022 1.121407699 1.057604846 0.120256783 0.078769612 1618.809064 3199350.047 0.031111253 0.021149198 5.32E-08 7.274082713 -0.063802854 SSS(ph)PTLTPSQEGSPVFAGFEGR ddPTM_A459_MK2206_30min_R2 2 SSSPTLTPSQEGSPVFAGFEGR 22 0 P0C860 P0C860 MSL3P1 Putative male-specific lethal-3 protein-like 2 1 S(0.147)S(0.147)S(0.685)PT(0.018)LT(0.002)PSQEGSPVFAGFEGR;S(0.006)S(0.008)S(0.656)PT(0.023)LT(0.042)PS(0.002)QEGS(0.263)PVFAGFEGR 137.99 1.28E-05 6660100 15092.5 17608.8 15941.6 21925.7 18694.7 18654.3 20229.7 16653 19662.1 20975 TRUE FALSE 16247.9934 16734.3726 16473.08499 20134.30017 17960.65214 19364.20246 17573.51609 18829.60428 21372.27392 20290.58747 0.800765056 0.824735736 0.811858455 0.992297547 0.885171618 0.954344101 0.86609203 0.927996999 1.053309765 1 14.30852302 -1.577519302 0.19108386 1.014824758 8.48E-11 0.577700593 0.054000492 40.59027364 0.485008806 0.110958446 12.11325763 0.026453351 1.577519302 -1.014824758 SSS(ph)PTQYGLTK ddPTM_A459_MK2206_30min_R1 1 SSSPTQYGLTK 11 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 S(0.152)S(0.152)S(0.694)PT(0.002)QYGLTK 188.96 1.96E-05 27593000 5016.1 4597.3 4939.5 4341.9 5423.1 4328.2 4781.2 4570.9 4409.5 3658.9 TRUE FALSE 4589.454354 4298.014934 4604.220502 4676.31389 5207.086443 4573.258944 4462.254872 4530.937103 4867.883305 4112.192155 1.116060286 1.045188253 1.119651108 1.137182727 1.266255624 1.112121898 1.085128006 1.101830102 1.183768443 1 12.00569197 -10.52251017 14.76824805 1.000000017 1.128497561 0.319984471 0.056693215 0 0 0.058507796 0.014190225 3.00E-11 10.52251017 0.128497543 SSS(ph)PTQYGLTK ddPTM_A459_MK2206_30min_R2 4 SSSPTQYGLTK 11 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 S(0.032)S(0.115)S(0.853)PT(0.001)QYGLTK;S(0.001)S(0.071)S(0.927)PT(0.001)QYGLTK;S(0.171)S(0.047)S(0.782)PTQYGLTK;S(0.007)S(0.076)S(0.913)PT(0.005)QYGLTK 202.32 1.84E-05 526596300 534737 619581 606933 597685 597133 581296 676816 519987 546084 602131 TRUE FALSE 575676.8759 588813.5085 627167.8433 548852.2236 573686.5581 603417.6266 587949.2462 587951.0863 593581.3992 582483.5148 0.988314452 1.01086725 1.076713465 0.942262244 0.984897501 1.035939407 1.009383495 1.009386654 1.019052701 1 19.15185769 -6.751232632 24.99773152 1.01500356 1.002167101 0.044555507 0.032333462 906.8569637 2221015.595 0.011183805 0.011054168 1.77E-07 6.751232632 -0.012836459 SSS(ph)PTSYWK ddPTM_A459_MK2206_30min_R1 4 SSSPTSYWK 9 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 SS(0.022)S(0.978)PTSYWK;S(0.191)S(0.101)S(0.706)PT(0.002)SYWK;S(0.137)S(0.137)S(0.723)PT(0.002)S(0.001)YWK;S(0.021)S(0.245)S(0.716)PT(0.006)S(0.011)YWK 139.43 0.0023803 110252000 21157.4 20176.4 19991.1 15887 19138.1 17623.2 21198.8 17289.9 21149.3 24751.8 TRUE FALSE 19357.85203 18862.91269 18634.15983 17110.61949 18375.78895 18621.01035 19784.66673 17138.73623 23347.84542 27818.23985 0.695869046 0.678077146 0.669854021 0.615086346 0.660566199 0.669381329 0.711212026 0.616097076 0.839299882 1 14.76374352 -8.505680812 3.358748368 0.999122619 0.665571688 0.92890876 0.029841409 0.048865833 1.358205566 0.028894809 0.007651173 3.12E-09 8.505680812 -0.333550932 SSS(ph)PTSYWK ddPTM_A459_MK2206_30min_R2 2 SSSPTSYWK 9 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(0.073)S(0.144)S(0.78)PT(0.002)S(0.001)YWK;S(0.001)S(0.112)S(0.885)PT(0.001)S(0.001)YWK 155.06 0.00082831 76459000 292320 227180 235010 275750 214430 183795 277760 205270 176667 222490 TRUE FALSE 314700.244 215898.5716 242845.1161 253220.3429 206010.4008 190789.4475 241289.7784 232099.4938 192033.1763 215230.1695 1.462156744 1.003105522 1.128304255 1.176509518 0.957163214 0.886443792 1.121077862 1.078378065 0.89222239 1 17.71552079 -2.926473075 1.666157826 1.028553127 199.9828419 0.6347542 0.097188891 433.1046913 3.383488965 0.027569759 327478.2169 0.001184478 2.926473075 198.9542888 SSS(ph)PVGLAK ddPTM_A459_MK2206_30min_R1 4 SSSPVGLAK 9 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.003)S(0.003)S(0.995)PVGLAK;S(0.003)S(0.029)S(0.967)PVGLAK;S(0.059)S(0.011)S(0.93)PVGLAK;S(0.023)S(0.023)S(0.955)PVGLAK 107.45 0.012579 363423000 55551.5 56222.8 56569.7 50165.9 52662.6 45533.9 52090.1 52323.8 49105.4 42986.2 TRUE FALSE 50826.55321 52562.6855 52729.90638 54029.68631 50564.93713 48111.99007 48615.26447 51866.33853 54210.08206 48311.65499 1.052055725 1.087991821 1.091453116 1.118357182 1.04664055 0.995867148 1.006284394 1.073578178 1.122091182 1 15.56008365 -6.405957585 7.434473884 1.039859583 1.08761642 0.263070844 0.038443452 0.40845529 23.63222699 0.012843558 0.014553681 3.93E-07 6.405957585 0.047756837 SSS(ph)PVGLAK ddPTM_A459_MK2206_30min_R2 4 SSSPVGLAK 9 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 SSS(1)PVGLAK;S(0.025)S(0.025)S(0.949)PVGLAK;S(0.019)S(0.064)S(0.917)PVGLAK;S(0.005)S(0.396)S(0.599)PVGLAK 164.66 0.00097838 285235000 1089350 1210200 1132450 1136900 1206040 1032210 1335550 1009290 970670 1137310 TRUE FALSE 1172751.474 1150103.228 1170205.318 1044011.633 1158684.81 1071491.475 1160190.681 1141207.668 1055097.122 1100199.668 1.065944217 1.045358639 1.06362995 0.948929239 1.053158662 0.973906379 1.054527387 1.037273235 0.959005127 1 20.06933394 SSS(ph)PVQVEEEPVR ddPTM_A459_MK2206_30min_R1 1 SSSPVQVEEEPVR 13 0 A0A0J9YVR0;Q8IZ21-3;Q8IZ21;Q8IZ21-2 A0A0J9YVR0;Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 S(0.071)S(0.071)S(0.859)PVQVEEEPVR 236.05 8.53E-15 120030000 3003.9 2400.7 2505.7 2386.9 3177.5 3148.4 3271 2764.5 2461.4 2274.3 TRUE FALSE 2748.402531 2244.413994 2335.620065 2570.739452 3050.933447 3326.659687 3052.797558 2740.330268 2717.271338 2556.057454 1.075250686 0.878076504 0.913758829 1.005744001 1.193609104 1.301480795 1.194338395 1.072092595 1.063071307 1 11.31970455 -6.112296934 4.308450811 1.151368142 0.949322284 0.445636761 0.092599706 0.20381775 6.279468815 0.029321167 0.038910976 7.72E-07 6.112296934 -0.202045858 SSS(ph)PVQVEEEPVR ddPTM_A459_MK2206_30min_R2 1 SSSPVQVEEEPVR 13 0 A0A0J9YVR0;Q8IZ21-3;Q8IZ21;Q8IZ21-2 A0A0J9YVR0;Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 S(0.002)S(0.002)S(0.996)PVQVEEEPVR 252.12 4.65E-23 250140000 65211 89588 79822 108790 90778 93021 78142 59567 83673 73515 TRUE FALSE 70203.6043 85139.19019 82483.22564 99901.509 87213.5996 96560.97934 67881.86153 67352.61142 90950.72629 71116.21157 0.987167381 1.197183994 1.159837171 1.404764213 1.226353284 1.357791384 0.954520215 0.947078169 1.278902859 1 16.11789085 -7.270005503 24.96854862 1.04071516 1.226701408 0.287242444 0.136454499 836.0539672 2436921.313 0.057325522 0.039335199 5.37E-08 7.270005503 0.185986248 SSS(ph)PVT(ph)ELASRSPIR ddPTM_A459_MK2206_30min_R2 1 SSSPVTELASRSPIR 15 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.006)S(0.009)S(0.986)PVT(0.999)ELAS(0.001)RSPIR 166.79 0.0074005 9123600 32712 44237 41382 49874 52911 45724 47425 48022 40001 42403 TRUE FALSE 35216.45587 42040.25491 42761.65523 45799.13466 50833.44828 47464.05886 41198.04053 54298.64028 43480.21467 41019.39358 0.85853185 1.024887285 1.042474096 1.116523933 1.239254017 1.157112641 1.004355183 1.323730937 1.05999165 1 15.32401854 -4.640782512 0.996323236 1.141941507 0.659036468 0.413512547 0.096259939 2.240346886 1.484783882 0.030551816 1.240857447 2.29E-05 4.640782512 -0.48290504 SSS(ph)PVTELAS(ph)RSPIR ddPTM_A459_MK2206_30min_R2 1 SSSPVTELASRSPIR 15 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.006)S(0.036)S(0.958)PVT(0.128)ELAS(0.856)RS(0.016)PIR 165.58 0.0029322 10227000 35940 54235 40941 51484 46195 54959 51165 43000 43758 49513 TRUE FALSE 38691.59403 51541.76877 42305.95251 47277.59251 44381.15219 57050.50326 44446.97404 48620.24764 47563.99174 47897.39486 0.807801638 1.076087101 0.883262078 0.98705979 0.926588018 1.191098251 0.927962244 1.015091693 0.993039222 1 15.54765957 SSS(ph)PVTELASR ddPTM_A459_MK2206_30min_R1 4 SSSPVTELASR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.002)S(0.005)S(0.99)PVT(0.003)ELASR;S(0.02)S(0.067)S(0.913)PVTELASR;SS(0.012)S(0.986)PVT(0.002)ELASR;S(0.005)S(0.043)S(0.952)PVTELASR 210.44 1.85E-05 520567000 24465.9 22707.8 22397.1 17196.6 21718 21744.3 27613.8 19523.2 23781.3 26369 TRUE FALSE 22384.94673 21229.51809 20876.84725 18521.08511 20852.92607 22975.44347 25771.73379 19352.51072 26253.45124 29635.7908 0.755334888 0.716347279 0.704447113 0.624956669 0.70363994 0.77526001 0.869615188 0.65301145 0.885869772 1 14.85505293 -8.918250426 0.460531101 1.01916614 0.69988598 0.621794078 0.068144555 1.246310024 0.528398547 0.117597124 0.041933127 1.21E-09 8.918250426 -0.31928016 SSS(ph)PVTELASR ddPTM_A459_MK2206_30min_R2 4 SSSPVTELASR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.381)S(0.061)S(0.559)PVTELASR;SS(0.003)S(0.996)PVTELASR;SS(0.018)S(0.981)PVTELASR;S(0.005)S(0.019)S(0.975)PVTELASR 208.74 1.83E-05 653198000 814984 668185 688013 812065 718494 691112 763716 634066 628770 825198 TRUE FALSE 877379.8017 635003.9045 710951.01 745716.6918 690282.3154 717412.7514 663439.1718 716940.6033 683459.278 798271.8568 1.099099003 0.795473245 0.890612645 0.934163826 0.864720846 0.898707308 0.831094277 0.898115845 0.856173586 1 19.60652062 -4.746771896 24.99515567 0.882018738 1.09909957 0.591474944 0.053198495 515.790349 878919.5771 0.01227966 0.269447097 1.79E-05 4.746771896 0.217080832 SSS(ph)QENLLDEVMK ddPTM_A459_MK2206_30min_R1 5 SSSQENLLDEVMK 13 0 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;H0Y470;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.002)S(0.007)S(0.991)QENLLDEVMK;S(0.009)S(0.03)S(0.962)QENLLDEVMK;SS(0.023)S(0.977)QENLLDEVMK;S(0.027)S(0.027)S(0.945)QENLLDEVMK;SS(0.023)S(0.976)QENLLDEVMK 246.77 1.04E-22 59003800 10264.04 11886.19 11110.3 11045.52 14338.9 15376.1 18392.8 18774.6 20012.3 17473.4 TRUE FALSE 9391.029499 11112.39687 10356.16379 11896.24786 13767.75125 16246.68149 17165.84987 18610.45565 22092.6502 19638.13671 0.478203693 0.565858006 0.527349613 0.605772739 0.701072177 0.827302597 0.874107871 0.947669116 1.124987086 1 14.26137043 -6.889505392 0.709000462 1.056998784 0.500038011 0.953571899 0.045289937 0.13373926 0.144441528 0.034094202 0.030405416 1.29E-07 6.889505392 -0.556960774 SSS(ph)QENLLDEVMK ddPTM_A459_MK2206_30min_R2 5 SSSQENLLDEVMK 13 0 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;H0Y470;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.056)S(0.126)S(0.818)QENLLDEVMK;S(0.034)S(0.034)S(0.932)QENLLDEVMK;S(0.001)S(0.02)S(0.979)QENLLDEVMK;SS(0.003)S(0.997)QENLLDEVMK;S(0.009)S(0.009)S(0.983)QENLLDEVMK 232.26 2.85E-13 20824000 72678 86147.7 66018.1 90828.6 98335.4 91099.9 128299.2 113694.9 99927.9 117267.8 TRUE FALSE 78242.28356 81869.73049 68219.1105 83407.61283 94474.2581 94566.77053 111453.3609 128555.2138 108619.4481 113441.3613 0.689715662 0.721692067 0.601360119 0.735248695 0.832802578 0.833618087 0.982475524 1.133230528 0.957494223 1 16.79158722 -6.861241005 1.113319906 1.040983571 0.678239969 0.856989055 0.059735778 0.169052502 0.440885407 0.033854779 0.027735968 1.38E-07 6.861241005 -0.362743602 SSS(ph)QGPLSSIR ddPTM_A459_MK2206_30min_R2 4 SSSQGPLSSIR 11 0 A0A0U1RQE4 A0A0U1RQE4 1 SS(0.013)S(0.986)QGPLSSIR;S(0.001)S(0.035)S(0.964)QGPLSSIR;SS(0.007)S(0.992)QGPLSSIR;SS(0.011)S(0.989)QGPLSSIR 182.37 3.69E-05 64281000 176093 215258 216465 231721 242359 205566 208731 183403 186329 205227 TRUE FALSE 189574.8155 204568.6007 223681.8351 212788.6531 232842.7679 213388.9582 181324.369 207374.4018 202535.5596 198530.4598 0.954890326 1.030414179 1.12668774 1.071818668 1.172831454 1.074842412 0.913332741 1.044547028 1.02017373 1 17.59900085 -7.059834055 24.94141577 0.99763438 1.07732618 0.268514711 0.062129389 351.4465546 146496.877 0.02488271 0.01927412 8.71E-08 7.059834055 0.079691799 SSS(ph)QIPEGFGLTSGGSNYSLAR ddPTM_A459_MK2206_30min_R2 2 SSSQIPEGFGLTSGGSNYSLAR 22 0 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 S(0.028)S(0.028)S(0.868)QIPEGFGLT(0.062)S(0.013)GGS(0.001)NYSLAR;S(0.013)S(0.013)S(0.974)QIPEGFGLTSGGSNYSLAR 199.29 2.41E-22 10472400 11778.3 13742.2 22421.2 35585 38908 53213 53911 47071 52647 42807 TRUE FALSE 12680.0557 13059.78233 23168.71162 32677.59167 37380.27642 55238.058 46832.42094 53223.34132 57226.1409 41410.2111 0.306206015 0.315375894 0.559492719 0.789119176 0.902682586 1.333923603 1.130938957 1.285270949 1.381933088 1 15.33769894 -5.976615714 0.95945436 1.252811254 0.25644695 0.903331425 0.11859455 0.16267756 0.301702739 0.049280304 0.111631813 1.06E-06 5.976615714 -0.996364304 down SSS(ph)QLGSPDVSHLIR ddPTM_A459_MK2206_30min_R2 1 SSSQLGSPDVSHLIR 15 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 S(0.298)S(0.298)S(0.404)QLGSPDVSHLIR 111.09 0.0022086 2840100 8011.5 6575.3 5078.4 8587.5 7173.3 5057.8 6095.4 6650.3 5485.8 4554.7 TRUE FALSE 8624.8666 6248.780163 5247.711321 7885.87378 6891.640199 5250.278123 5295.066658 7519.517044 5962.944968 4406.080512 1.957491829 1.418217426 1.191015758 1.789770695 1.564120351 1.191598317 1.201763482 1.706622705 1.353344532 1 12.10528014 -6.736978554 23.89368098 1.329273374 1.564491984 0.239824699 0.255477273 266.0899722 259919.0642 0.08596011 0.085910552 1.83E-07 6.736978554 0.235218609 SSS(ph)QPSSCCSDPSKPGGNVEGATQSLAEQMR ddPTM_A459_MK2206_30min_R1 1 SSSQPSSCCSDPSKPGGNVEGATQSLAEQMR 31 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 S(0.075)S(0.075)S(0.707)QPS(0.118)S(0.021)CCS(0.004)DPS(0.001)KPGGNVEGATQSLAEQMR 66.05 0.00066872 7487700 1162.8 1200.7 1349.6 1143.3 920.51 853.3 1303.9 930.47 1153.2 968.1 TRUE FALSE 1063.897754 1122.534212 1257.992912 1231.357164 883.8441375 901.6131086 1216.91921 922.3349989 1273.079267 1088.035537 0.977815262 1.031707305 1.156205721 1.131725134 0.812330211 0.828661453 1.11845539 0.847706686 1.170071403 1 10.08750996 -6.228359079 24.96168708 0.95632488 1.077162379 0.170368612 0.11994695 1107.47843 835679.3445 0.035465932 0.045782818 5.91E-07 6.228359079 0.1208375 SSS(ph)SDSIHSVR ddPTM_A459_MK2206_30min_R1 2 SSSSDSIHSVR 11 0 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 S(0.013)S(0.003)S(0.583)S(0.027)DS(0.375)IHSVR;S(0.009)S(0.009)S(0.927)S(0.044)DS(0.013)IHSVR 155.47 0.0012858 2455500 7884 6403.6 7301.3 5007.7 8279.5 7683.3 8295.8 7391.1 5258.08 5228.6 TRUE FALSE 7213.424399 5986.724476 6805.708099 5393.393922 7949.709983 8118.321806 7742.402319 7326.480392 5804.676232 5876.358442 1.227533084 1.018781365 1.158150607 0.917812277 1.352829318 1.381522568 1.317551064 1.246772208 0.987801593 1 12.52070668 -4.450872602 21.79662161 1.169547512 3.379468968 0.01015617 0.159500231 2409.043296 806737.9187 0.04055843 27653.52492 3.54E-05 4.450872602 2.209921456 SSS(ph)SDSIHSVR ddPTM_A459_MK2206_30min_R2 1 SSSSDSIHSVR 11 0 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 S(0.005)S(0.021)S(0.944)S(0.029)DS(0.002)IHSVR 103.44 0.013288 3905800 11732 18776 14106 24800 23625 28516 25570 15287 18498 17543 TRUE FALSE 12630.21094 17843.61114 14576.287 22773.76067 22697.36379 29601.19636 22212.62828 17285.06339 20106.9226 16970.57335 0.744241852 1.051444213 0.858915412 1.341955879 1.337454153 1.744266134 1.308890857 1.018531492 1.184811037 1 14.05074769 -5.761557441 24.99999989 1.300702999 0.901524797 0.423231668 0.207935358 3.140943277 665355.335 0.061409182 0.098067016 1.73E-06 5.761557441 -0.399178202 SSS(ph)SGSDDYAYTQALLLHQR ddPTM_A459_MK2206_30min_R1 1 SSSSGSDDYAYTQALLLHQR 20 0 F6SS63;Q8N5C8-2;Q8N5C8 F6SS63 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 1 S(0.089)S(0.089)S(0.687)S(0.135)GS(0.001)DDYAYTQALLLHQR 228.11 5.43E-24 9947500 1316.6 975.86 1184.8 1233.3 1216.9 983 1156.6 1211.9 1021.1 814.72 TRUE FALSE 1204.616256 912.3313366 1104.379077 1328.28898 1168.428296 1038.656611 1079.445324 1201.304486 1127.246999 915.6536644 1.315580664 0.996371633 1.206110039 1.450645622 1.276059215 1.134333483 1.178879489 1.311963827 1.231084462 1 9.838658208 -10.60782406 4.681232809 0.999987996 1.23110143 0.271146277 0.114765037 1.51E-05 2.95E-06 0.116266341 0.028197263 2.47E-11 10.60782406 0.231113434 SSS(ph)SGSLNAR ddPTM_A459_MK2206_30min_R2 1 SSSSGSLNAR 10 0 H0Y7V5;Q7Z3E2 H0Y7V5 CCDC186 Coiled-coil domain-containing protein 186 1 S(0.033)S(0.267)S(0.386)S(0.267)GS(0.047)LNAR 84.687 0.03752 4797500 31651 28073 29183 35292 31530 30770 33921 31212 25310 29544 TRUE FALSE 34074.2249 26678.93564 30155.94665 32408.53071 30291.97377 31940.97391 29467.13195 35291.51557 27511.41805 28579.9817 1.192240963 0.9334833 1.055142266 1.133959113 1.05990179 1.117599523 1.031040966 1.234833386 0.962611465 1 14.80271737 -4.434257528 20.82108456 1.068938653 9.826862982 0.177003267 0.083803941 449.4947269 106475.0266 0.01921677 1529.85392 3.68E-05 4.434257528 8.75792433 SSS(ph)SPELQTLQDILGDPGDKADVGR ddPTM_A459_MK2206_30min_R2 2 SSSSPELQTLQDILGDPGDKADVGR 25 1 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 1 S(0.047)S(0.047)S(0.65)S(0.256)PELQTLQDILGDPGDKADVGR;S(0.052)S(0.052)S(0.69)S(0.205)PELQT(0.001)LQDILGDPGDKADVGR 116.65 4.28E-08 5648800 26323 39708 40794 38028 42232 36346 44035 28175.2 38842 40927 TRUE FALSE 28338.30912 37736.15846 42154.0516 34920.99075 40573.75948 37729.1725 38253.1516 31857.79538 42220.40695 39591.55534 0.715766503 0.95313655 1.064723304 0.882031293 1.024808425 0.952960099 0.966194717 0.804661376 1.066399301 1 15.27290512 -4.763368082 6.187531573 0.964308743 0.707738166 0.498009994 0.076050591 0.103479832 16.50848665 0.018023415 0.112549171 1.72E-05 4.763368082 -0.256570577 SSS(ph)SPTEATEK ddPTM_A459_MK2206_30min_R1 1 SSSSPTEATEK 11 0 E7EME3;Q9UBG0 E7EME3 MRC2 C-type mannose receptor 2 1 S(0.043)S(0.071)S(0.818)S(0.063)PT(0.005)EATEK 141.71 0.0037767 0 4503.9 4039.2 3855.7 3424.9 2923.3 2918.6 4116.9 4391.5 2269.3 3834.4 TRUE FALSE 4120.819654 3776.247346 3593.985827 3688.686391 2806.858771 3083.84861 3842.269113 4353.105578 2505.201856 4309.43442 0.95623213 0.876274466 0.833980861 0.855956033 0.651328805 0.715604023 0.891594752 1.010133849 0.581329616 1 12.07328282 -4.862544535 1.428337834 0.809532859 0.999486347 0.099433001 0.130887191 2.501941825 5.24513971 0.038017491 0.656978471 1.37E-05 4.862544535 0.189953488 SSS(ph)SPTEATEK ddPTM_A459_MK2206_30min_R2 1 SSSSPTEATEK 11 0 E7EME3;Q9UBG0 E7EME3 MRC2 C-type mannose receptor 2 1 S(0.04)S(0.04)S(0.459)S(0.459)PT(0.002)EATEK 166.11 0.00061395 7407300 61665 52275 61541 47300 48935 50811 62772 42770 70736 57988 TRUE FALSE 66386.11981 49679.09951 63592.74622 43435.43869 47013.56602 52744.64821 54529.961 48360.18585 76888.48942 56095.85631 1.183440706 0.885610859 1.133644273 0.774307436 0.838093384 0.940259258 0.972085366 0.862099075 1.370662549 1 15.77560659 -8.24548326 24.97897171 1.185331316 0.943754052 0.295694315 0.145925586 814.925479 1275753.796 0.094797902 0.035583705 5.68E-09 8.24548326 -0.241577263 SSS(ph)SQTLTQFDSNIAPADPDTAIVHPVPIR ddPTM_A459_MK2206_30min_R1 1 SSSSQTLTQFDSNIAPADPDTAIVHPVPIR 30 0 Q96D71;Q96D71-3;H0YE73 Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 S(0.18)S(0.18)S(0.313)S(0.313)QT(0.013)LTQFDSNIAPADPDTAIVHPVPIR 191.8 4.98E-40 3320100 245.82 143.06 62.841 61.023 424.45 171.83 290.38 257.56 183.53 167.72 TRUE FALSE 224.9117181 133.746768 58.57552801 65.72300203 407.5432577 181.5588661 271.00928 255.3081801 202.6086003 188.4984198 1.193175616 0.709537874 0.310748112 0.348666064 2.162051322 0.963185083 1.437727066 1.354431408 1.074855696 1 7.558408619 -6.225764296 24.99994154 1.33660522 0.621904883 0.430100018 0.389701407 568.0506225 398071.3664 0.113803268 0.146914324 5.95E-07 6.225764296 -0.714700337 SSS(ph)SQTLTQFDSNIAPADPDTAIVHPVPIR ddPTM_A459_MK2206_30min_R2 2 SSSSQTLTQFDSNIAPADPDTAIVHPVPIR 30 0 Q96D71;Q96D71-3;H0YE73 Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 S(0.207)S(0.256)S(0.394)S(0.121)QT(0.022)LTQFDSNIAPADPDTAIVHPVPIR;S(0.005)S(0.006)S(0.41)S(0.41)QT(0.169)LT(0.001)QFDSNIAPADPDTAIVHPVPIR 131.78 4.86E-18 7276400 2197.6 6064.2 4812.8 5903.2 5593.7 6372.1 8534.3 4567.5 5932.27 6497.9 TRUE FALSE 2365.849946 5763.060646 4973.25635 5420.889677 5374.063232 6614.594731 7413.736158 5164.487933 6448.248122 6285.874055 0.376375652 0.916827254 0.791179764 0.862392347 0.854942874 1.052295142 1.179428047 0.821602197 1.025831581 1 12.61789765 -4.598031041 2.137498101 0.949089179 1.84E-85 0.683159436 0.115574956 0.860998184 2.807361175 0.03237915 1.88551279 2.52E-05 4.598031041 -0.949089179 SSS(ph)SSASPS(ph)SPSSR ddPTM_A459_MK2206_30min_R2 1 SSSSSASPSSPSSR 14 0 E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 2 S(0.025)S(0.011)S(0.964)S(0.001)S(0.004)AS(0.097)PS(0.829)S(0.068)PS(0.001)SR 150.9 0.0074984 2607200 9884.8 11122 9003.3 10153 10696 11271 10824 6349.4 7375.6 9816.8 TRUE FALSE 10641.58789 10569.69765 9303.465528 9323.467422 10276.0213 11699.9258 9402.795798 7179.288381 8017.116356 9496.47862 1.120582514 1.113012315 0.979675299 0.981781542 1.082087551 1.232027815 0.990134994 0.755994792 0.844219913 1 13.21317693 -7.549742763 7.55960789 0.85336476 1.07944354 0.552925921 0.08757476 0.142809263 30.52832958 0.042517628 0.024735654 2.82E-08 7.549742763 0.22607878 SSS(ph)SSASPSSPSSR ddPTM_A459_MK2206_30min_R2 1 SSSSSASPSSPSSR 14 0 E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.119)S(0.017)S(0.825)S(0.035)S(0.002)AS(0.002)PSSPSSR 116.63 0.0026221 1936900 13113 11847 11139 10908 13187 11592 11719 10194 10133 10252 TRUE FALSE 14116.94136 11258.69521 11510.3687 10016.78151 12669.21212 12033.14168 10180.28122 11526.3908 11014.35002 9917.47808 1.423440642 1.13523772 1.160614484 1.010012972 1.277463083 1.213326774 1.026498989 1.162230025 1.110599886 1 13.27575759 -4.761048824 6.766132512 1.128864364 1.430656513 0.527881652 0.085370475 0.092938489 22.29559207 0.020784333 0.128835128 1.73E-05 4.761048824 0.301792149 SSS(ph)SSQESLNRPLSAK ddPTM_A459_MK2206_30min_R2 1 SSSSSQESLNRPLSAK 16 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.001)S(0.004)S(0.958)S(0.034)S(0.003)QESLNRPLSAK 222.42 2.51E-10 7551100 39407 33459 28139 39094 33289 30683 33408 27945 33176 39149 TRUE FALSE 42424.03022 31797.47471 29077.14022 35899.89514 31981.9066 31850.66307 29021.48947 31597.50745 36061.58851 37871.57134 1.120207816 0.839613293 0.767782777 0.94793783 0.844483222 0.841017733 0.766313318 0.834333151 0.952207348 1 15.20882766 -4.759320641 24.99125026 0.855716676 1.120208156 0.508046881 0.074442616 43.20447377 509487.4948 0.017878354 0.114376298 1.74E-05 4.759320641 0.26449148 SSS(ph)SSS(ph)SSSGSEASSEHKR ddPTM_A459_MK2206_30min_R1 1 SSSSSSSSSGSEASSEHKR 19 1 A0A1B0GV45 A0A1B0GV45 2 S(0.044)S(0.058)S(0.897)S(0.001)S(0.001)S(0.938)S(0.061)SSGSEASSEHKR 140.84 0.00025603 0 254.06 193.81 51.108 186.16 195.68 129.38 0 72.155 73.507 63.835 TRUE FALSE 232.4508629 181.1929338 47.63893136 200.4980755 187.8856512 136.7053838 0 71.52415644 81.1483157 71.74336173 3.240033047 2.52557072 0.664018666 2.794656824 2.618857644 1.90547781 0 0.996944591 1.131091626 1 6.164773443 -7.077194421 5.974735594 0.789156404 2.303475868 0.539951436 0.691958591 0.197082223 11.94754855 0.275868013 0.21435111 8.37E-08 7.077194421 1.514319464 SSS(ph)STPTSPKPLLQSPKPSLAAR ddPTM_A459_MK2206_30min_R2 2 SSSSTPTSPKPLLQSPKPSLAAR 23 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.095)S(0.095)S(0.41)S(0.048)T(0.042)PT(0.155)S(0.155)PKPLLQSPKPSLAAR;S(0.07)S(0.07)S(0.536)S(0.079)T(0.037)PT(0.092)S(0.08)PKPLLQS(0.032)PKPS(0.003)LAAR 62.032 0.0032146 24975000 129224 133182 125839 133309 107653 78905 134369 112367 89375 124744 TRUE FALSE 139117.4888 126568.3755 130034.4095 122417.2283 103426.0023 81907.78507 116726.1889 127053.7527 97148.67595 120673.6135 1.152840996 1.048848807 1.077571191 1.014449014 0.857072224 0.678754723 0.96728842 1.052871038 0.805053177 1 16.88075073 -6.050284904 3.343193807 0.88986866 1.086609387 0.440377447 0.101900748 0.25147984 5.636391943 0.032709792 0.046042015 8.91E-07 6.050284904 0.196740728 SSS(ph)TEPPPPVR ddPTM_A459_MK2206_30min_R1 3 SSSTEPPPPVR 11 0 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 S(0.015)S(0.1)S(0.84)T(0.046)EPPPPVR;S(0.068)S(0.068)S(0.852)T(0.011)EPPPPVR;S(0.003)S(0.003)S(0.985)T(0.01)EPPPPVR 203.03 1.82E-05 36688400 11594.8 12446.3 12071.1 10391.9 12346.5 10885.7 13311.7 11389.7 10162.9 11393.2 TRUE FALSE 10608.60137 11636.04361 11251.74736 11192.28594 11854.71276 11502.03893 12423.70078 11290.12105 11219.36982 12804.67563 0.828494347 0.908733961 0.87872178 0.874078053 0.925811251 0.898268668 0.970247208 0.88171863 0.876193208 1 13.64438309 SSS(ph)TEPPPPVR ddPTM_A459_MK2206_30min_R2 3 SSSTEPPPPVR 11 0 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 SS(0.003)S(0.996)TEPPPPVR;SS(0.003)S(0.982)T(0.016)EPPPPVR;S(0.003)SS(0.773)T(0.224)EPPPPVR 223.87 4.88E-06 59855000 92181 118817 95143 122800 114508 107784 109842 85612 92095 105538 TRUE FALSE 99238.44824 112916.7206 98315.02013 112766.8472 110011.8406 111885.7956 95419.61346 96801.78235 100105.2566 102094.3037 0.972027279 1.10600412 0.962982425 1.104536131 1.077551211 1.095906349 0.934622305 0.948160464 0.980517551 1 16.63954285 -7.266728328 24.999041 0.961505116 1.054913475 0.418307445 0.050329993 412.6560849 1950472.961 0.01998679 0.013935799 5.41E-08 7.266728328 0.093408358 SSS(ph)TGNLLDKDDLAIPPPDYGAASR ddPTM_A459_MK2206_30min_R1 2 SSSTGNLLDKDDLAIPPPDYGAASR 25 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 S(0.178)S(0.178)S(0.602)T(0.043)GNLLDKDDLAIPPPDYGAASR;S(0.146)S(0.146)S(0.523)T(0.184)GNLLDKDDLAIPPPDYGAASR 117.66 4.27E-08 113722000 9284.3 8259.2 7281.5 7310.3 7450.2 8404.4 8228.9 8625.8 8104.5 7846 TRUE FALSE 8494.621531 7721.524579 6787.252067 7873.340573 7153.442758 8880.249865 7679.965095 8550.38554 8946.991777 8818.021714 0.963325087 0.875652706 0.769702354 0.892869266 0.811229887 1.007056929 0.87093969 0.969648955 1.014625737 1 13.10623931 -7.570033449 0.875862185 1.00981839 0.864808686 0.390905434 0.063759436 0.620368387 0.878092418 0.055063375 0.02612865 2.69E-08 7.570033449 -0.145009704 SSS(ph)TGNLLDKDDLAIPPPDYGAASR ddPTM_A459_MK2206_30min_R2 3 SSSTGNLLDKDDLAIPPPDYGAASR 25 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 S(0.159)S(0.159)S(0.632)T(0.05)GNLLDKDDLAIPPPDYGAASR;S(0.136)S(0.136)S(0.563)T(0.165)GNLLDKDDLAIPPPDYGAASR;S(0.174)S(0.174)S(0.588)T(0.064)GNLLDKDDLAIPPPDYGAASR 102.91 9.07E-07 46792000 179577 203773 163904 203294 196698 194355 227206 189211 172808 201152 TRUE FALSE 193325.5532 193653.9291 169368.4776 186684.2299 188974.6482 201751.3157 197373.5793 213941.5274 187838.5275 194588.4267 0.993510028 0.995197569 0.870393375 0.959379923 0.971150502 1.036810457 1.014313043 1.099456586 0.965311918 1 17.57006638 -6.650566538 3.645805715 1.029021233 0.952639034 0.340930112 0.04527916 0.253329893 6.458885854 0.015759508 0.015601809 2.24E-07 6.650566538 -0.076382199 SSS(ph)TGSSSSTGGGGQESQPSPLALLAATCSR ddPTM_A459_MK2206_30min_R2 1 SSSTGSSSSTGGGGQESQPSPLALLAATCSR 31 0 P08047;H3BVI2;P08047-2 P08047 SP1 Transcription factor Sp1 1 S(0.299)S(0.299)S(0.359)T(0.035)GS(0.004)S(0.001)SS(0.001)T(0.001)GGGGQESQPSPLALLAATCSR 103.09 5.67E-09 1973400 1163.6 2264 1633.9 3066.1 2818.1 1289.6 2245.6 1075.9 1283.4 1007.9 TRUE FALSE 1252.686111 2151.573052 1688.373411 2815.589822 2707.447234 1338.676632 1950.750023 1216.523824 1395.027812 975.0123055 1.284790052 2.206713741 1.731643181 2.887747986 2.776833912 1.372984345 2.000744002 1.247700995 1.430779698 1 9.929276617 -7.649605986 1.211871026 1.148861375 2.13941516 0.356898241 0.499302269 0.556135163 1.504834009 0.418671476 0.175923057 2.24E-08 7.649605986 0.990553786 SSS(ph)TSDILEPFTVER ddPTM_A459_MK2206_30min_R1 4 SSSTSDILEPFTVER 15 0 A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 SS(0.003)S(0.945)T(0.049)S(0.003)DILEPFTVER;SSS(1)TSDILEPFTVER;S(0.001)S(0.001)S(0.991)T(0.005)SDILEPFTVER;SS(0.002)S(0.997)T(0.001)SDILEPFTVER 376.67 5.31E-214 139747300 11727.8 10251.6 10811.7 9789.4 13164.2 11925.7 13694.1 13770.3 13145 11811.6 TRUE FALSE 10730.28902 9584.218977 10077.83193 10543.38128 12639.84204 12600.92283 12780.59158 13649.90772 14511.46979 13274.91018 0.808313494 0.721979949 0.75916385 0.794233719 0.952160268 0.949228481 0.962762942 1.028248593 1.09315013 1 13.69641448 -6.452356618 1.01324 1.029633661 0.745885143 0.889112992 0.039887071 0.164343939 0.361459918 0.020361575 0.025596999 3.53E-07 6.452356618 -0.283748518 SSS(ph)TSDILEPFTVER ddPTM_A459_MK2206_30min_R2 7 SSSTSDILEPFTVER 15 0 A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 SSS(0.99)T(0.007)S(0.003)DILEPFTVER;S(0.025)S(0.002)S(0.928)T(0.044)SDILEPFTVER;SS(0.006)S(0.994)TSDILEPFTVER;S(0.005)S(0.005)S(0.944)T(0.044)S(0.003)DILEPFTVER;SSS(1)TSDILEPFTVER;S(0.004)SS(0.455)T(0.455)S(0.086)DILEPFTVER;SS(0.005)S(0.972)T(0.023)SDILEPFTVER 292.16 2.39E-67 33544700 62698.4 72315.5 60696.9 76071.4 69575.2 79704.6 83222.5 66868.3 77848.6 77867.6 TRUE FALSE 67498.63771 68724.41743 62720.50435 69856.12328 66843.32806 82737.8144 72295.28578 75608.2164 84619.73051 75326.78659 0.896077488 0.912350314 0.832645427 0.927374264 0.887377931 1.098385025 0.959755341 1.003736119 1.123368384 1 16.20087537 -6.745026793 24.99851511 1.032451624 0.891102529 0.679908996 0.049998482 145.5482045 221688.5825 0.016242401 0.016196814 1.80E-07 6.745026793 -0.141349095 SSS(ph)VGS(ph)SSSYPISPAVSR ddPTM_A459_MK2206_30min_R2 3 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 S(0.002)S(0.003)S(0.995)VGS(0.533)S(0.375)S(0.067)S(0.024)YPISPAVSR;S(0.069)S(0.022)S(0.908)VGS(0.783)S(0.171)S(0.038)S(0.009)YPISPAVSR;S(0.215)S(0.316)S(0.469)VGS(0.569)S(0.384)S(0.038)S(0.008)YPIS(0.001)PAVSR 155.92 0.00045265 62216000 113810 146864 131041 147982 176774 227761 266470 215898 259711 287588 TRUE FALSE 122523.3811 139570.9473 135409.8415 135891.3972 169832.9645 236428.6045 231482.1689 244116.6099 282300.1933 278204.0271 0.440408366 0.501685575 0.486728546 0.48845949 0.61046192 0.8498389 0.832059016 0.877473315 1.014723605 1 18.08578378 -6.807212383 0.93377137 0.969417083 0.454431585 0.954940402 0.045743089 0.111301126 0.208486727 0.029151844 0.02558913 1.56E-07 6.807212383 -0.514985498 down SSS(ph)VGSS(ph)SSYPISPAVSR ddPTM_A459_MK2206_30min_R2 1 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 S(0.007)S(0.01)S(0.98)VGS(0.39)S(0.59)S(0.019)S(0.004)YPISPAVSR 180.02 2.61E-08 9698100 22260 30638 22922 33336 42595 48581 65486 48344 55520 61956 TRUE FALSE 23964.24272 29116.56147 23686.20804 30612.34216 40922.50628 50429.784 56887.60954 54662.72679 60349.02924 59934.38079 0.399841333 0.485807329 0.395202348 0.510764302 0.682788505 0.841416618 0.949164883 0.912042905 1.006918374 1 15.87109621 -6.581661064 1.215096989 0.971887042 0.421765823 0.979622644 0.034165749 0.056171014 0.17444587 0.015402491 0.016466544 2.62E-07 6.581661064 -0.550121219 down SSS(ph)VGSSSS(ph)YPISPAVSR ddPTM_A459_MK2206_30min_R2 1 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 S(0.051)S(0.076)S(0.872)VGSS(0.114)S(0.244)S(0.338)YPIS(0.304)PAVSR 171.87 1.08E-06 43431000 21840 27178 24025 26838 22251 37867 33689 25936 34955 37995 TRUE FALSE 23512.08719 25828.38004 24825.98151 24645.24955 21377.31394 39308.05522 29265.59383 29325.92425 37995.32272 36755.22626 0.639693714 0.702713129 0.675440857 0.670523679 0.581612905 1.069454856 0.796229457 0.797870867 1.033739323 1 15.16566178 -6.751175445 24.99999579 0.917874 0.658812787 0.713019538 0.090005955 125.0097141 304487.3407 0.029786773 0.029467381 1.77E-07 6.751175445 -0.259061212 SSS(ph)VGSSSSYPIS(ph)PAVSR ddPTM_A459_MK2206_30min_R2 2 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 S(0.074)S(0.182)S(0.743)VGSSSSYPIS(1)PAVSR;S(0.182)S(0.013)S(0.806)VGSSSSYPIS(1)PAVSR 235.72 1.06E-18 14087500 38677 40901 35949 42390 42809 56478 62688 54595 54156 56971 TRUE FALSE 41638.14086 38869.91582 37147.52172 38926.6014 41128.10356 58627.30987 54456.9903 61730.75395 58866.39099 55112.04094 0.755518035 0.705288992 0.674036401 0.706317544 0.746263482 1.063784046 0.988114201 1.120095589 1.068122138 1 15.75007993 -6.731948809 5.185456861 1.053047027 0.710440773 0.945288828 0.039785515 0.039089141 2.679978572 0.013790647 0.013320027 1.85E-07 6.731948809 -0.342606254 SSS(ph)VGSSSSYPISPAVSR ddPTM_A459_MK2206_30min_R1 7 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 S(0.074)S(0.074)S(0.852)VGSSSSYPISPAVSR;SSS(1)VGSSSSYPISPAVSR;S(0.005)S(0.064)S(0.93)VGS(0.001)SSSYPISPAVSR;S(0.056)S(0.056)S(0.887)VGSSSSYPISPAVSR;S(0.002)S(0.059)S(0.617)VGS(0.161)S(0.161)S(0.001)SYPISPAVSR;SSS(0.992)VGS(0.007)SSSYPISPAVSR;S(0.002)S(0.029)S(0.96)VGS(0.009)SSSYPISPAVSR 336.79 3.17E-145 2357999700 12504.8 13444 12949.1 11214.8 14777.13 17184 23410.6 24069 24999 22727.3 TRUE FALSE 11441.20109 12568.79316 12070.15117 12078.56584 14188.52562 18156.94323 21848.92159 23858.56727 27597.73551 25542.92951 0.447920474 0.492065452 0.472543729 0.472873162 0.555477617 0.710840283 0.855380413 0.934057594 1.080445197 1 14.64063638 -7.174190966 1.021500505 1.036002345 0.462230063 0.983970756 0.029549188 0.05861958 0.121323407 0.020214512 0.012393943 6.70E-08 7.174190966 -0.573772282 down SSS(ph)VGSSSSYPISPAVSR ddPTM_A459_MK2206_30min_R2 11 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 S(0.02)S(0.02)S(0.956)VGS(0.001)S(0.001)S(0.001)S(0.001)YPISPAVSR;SS(0.003)S(0.996)VGS(0.001)SSSYPISPAVSR;S(0.003)SS(0.962)VGS(0.009)S(0.024)S(0.001)SYPISPAVSR;S(0.001)S(0.045)S(0.954)VGSSSSYPISPAVSR;SS(0.001)S(0.999)VGSSSSYPISPAVSR;S(0.024)S(0.023)S(0.953)VGSSSSYPISPAVSR;SS(0.008)S(0.992)VGSSSSYPISPAVSR;S(0.001)S(0.068)S(0.93)VGSSSSYPISPAVSR;S(0.017)S(0.003)S(0.979)VGS(0.001)SSSYPISPAVSR;S(0.161)S(0.054)S(0.783)VGS(0.002)SSSYPISPAVSR;SS(0.001)S(0.996)VGS(0.003)SSSYPISPAVSR 359.98 4.55E-206 5401184300 527417.6 614688 566626 589690 610766 702451 835097 714967 825411 799028 TRUE FALSE 567797.097 584163.4878 585517.028 541510.4407 586784.258 729183.265 725447.7608 808415.6417 897203.7568 772955.7818 0.734579015 0.755752789 0.757503911 0.700571046 0.759143371 0.94336996 0.938537207 1.045875664 1.160743962 1 19.56002636 -7.103944977 1.214254376 1.075430063 0.733254198 0.888064193 0.050359302 0.143170359 0.42362496 0.030558813 0.020076482 7.87E-08 7.103944977 -0.342175865 SSS(ph)VLSLEGSEK ddPTM_A459_MK2206_30min_R1 1 SSSVLSLEGSEK 12 0 A1L390-3;A1L390;G3V311;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(0.001)S(0.357)S(0.638)VLS(0.004)LEGSEK 171.62 0.00025837 12420000 3610.5 3509.4 3570.8 3024 3043.1 2716.6 3073.6 3442.8 3229.2 3112.2 TRUE FALSE 3303.408016 3280.937422 3328.424045 3256.909004 2921.886883 2870.411544 2868.565752 3412.699963 3564.886896 3497.762832 0.944434536 0.93801026 0.951586544 0.931140606 0.835358777 0.820642131 0.820114425 0.975680778 1.01919057 1 11.77221675 -7.943613872 7.831213409 1.005696121 0.892431002 0.510137135 0.048624237 0.217424038 26.13168714 0.031437009 0.014974574 1.14E-08 7.943613872 -0.113265119 SSS(ph)VLSLEGSEK ddPTM_A459_MK2206_30min_R2 3 SSSVLSLEGSEK 12 0 A1L390-3;A1L390;G3V311;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 SS(0.004)S(0.986)VLS(0.011)LEGSEK;S(0.001)S(0.003)S(0.995)VLS(0.001)LEGSEK;SS(0.016)S(0.969)VLS(0.015)LEGSEK 148.89 0.00059074 50361000 161943 183080 167727 173158 171420 147069 192251 148335 150690 193436 TRUE FALSE 174341.4806 173988.5134 173318.9345 159010.4375 164689.1895 152665.8139 167008.2128 167722.8938 163796.7438 187124.1992 0.931688586 0.929802314 0.926224055 0.849758814 0.880106316 0.815852864 0.892499279 0.896318566 0.875337046 1 17.51363662 -11.29044972 2.601775869 1.027887931 0.887744874 0.479739004 0.034785546 41757786.38 29967773.69 7424553.983 0.009707807 5.12E-12 11.29044972 -0.140143057 SSS(ph)VTSIDKESR ddPTM_A459_MK2206_30min_R1 1 SSSVTSIDKESR 12 1 H0Y332;Q5JRH0;Q5T5C0-3;Q5T5C0-2;Q5T5C0 H0Y332 STXBP5 Syntaxin-binding protein 5 1 SS(0.014)S(0.632)VT(0.327)S(0.027)IDKESR 201.38 0.0003804 4406100 1964.4 2319.1 1956.1 2102.1 2098.7 1596.3 2285.1 2640.7 2473.8 1919.2 TRUE FALSE 1797.317465 2168.126168 1823.325382 2264.004106 2015.104335 1686.681127 2132.665148 2617.612638 2730.960363 2156.964985 0.833262235 1.005174485 0.84531988 1.049624877 0.934231362 0.781969637 0.988734246 1.213562879 1.266112515 1 11.07478704 -7.645018258 4.590974431 1.178495527 0.915246558 0.560882979 0.098724844 0.145810115 5.162705531 0.047658356 0.026342136 2.26E-08 7.645018258 -0.263248969 SSS(ph)WGR ddPTM_A459_MK2206_30min_R2 1 SSSWGR 6 0 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7;E9PF00;Q8WXF0 H7C1F9;Q8WXF0 RALGAPA2;IST1;SRSF12 Ral GTPase-activating protein subunit alpha-2;Serine/arginine-rich splicing factor 12 1 S(0.001)S(0.054)S(0.945)WGR 106.42 0.025928 19893000 43675 53913 50806 61132 56869 65444 45065 50204 64532 56814 TRUE FALSE 47018.79158 51235.75882 52499.84668 56137.32005 54636.03732 67934.51728 39147.91137 56765.83518 70144.87671 54960.16383 0.855506758 0.932234463 0.955234538 1.021418353 0.994102519 1.236068318 0.712296118 1.032854184 1.276285801 1 15.74609868 -3.136457521 0.472249726 1.046300519 3.56E-10 0.15593817 0.143468004 42.98386267 2.150771721 0.088155822 35.00792675 0.000730369 3.136457521 -1.046300519 SSSALDS(ph)PAGPR ddPTM_A459_MK2206_30min_R1 1 SSSALDSPAGPR 12 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 SSS(0.018)ALDS(0.982)PAGPR 124.38 0.003067 14187000 3676.8 3281.7 3022.3 2846.6 3675.8 2852.2 3215.6 3086.9 2493.2 2714.6 TRUE FALSE 3364.068852 3068.060734 2817.154697 3065.845625 3529.385102 3013.689099 3001.093191 3059.911559 2752.377062 3050.905142 1.102646164 1.005623115 0.923383247 1.004897066 1.156832133 0.987801639 0.983673058 1.002952047 0.902150979 1 11.57502161 -6.978981548 24.99429081 0.974339571 1.032934106 0.198706738 0.063654762 472.8462864 562287.7493 0.023733841 0.020929514 1.05E-07 6.978981548 0.058594535 SSSALDS(ph)PAGPR ddPTM_A459_MK2206_30min_R2 1 SSSALDSPAGPR 12 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 SSS(0.001)ALDS(0.999)PAGPR 182.25 0.00010418 17765000 71037 75660 67236 71687 70604 93434 96913 59659 64971 71304 TRUE FALSE 76475.64734 71902.83442 69477.61468 65829.94278 67831.7322 96989.69634 84188.20669 67456.63614 70622.06014 68977.35632 1.108706558 1.042412152 1.007252501 0.954370337 0.983391301 1.406109215 1.220519474 0.977953342 1.023844112 1 16.07383522 -3.693772049 15.49129201 1.076823416 1.077392895 0 0.133539031 0 0 0.033214246 0 0.000202408 3.693772049 0.000569479 SSSAPLIHGLSDLSQVFQPYTLR ddPTM_A459_MK2206_30min_R1 1 SSSAPLIHGLSDLSQVFQPYTLR 23 0 G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-2;Q7Z309 G1UD79;Q7Z309-2 SPACIA2;FAM122B Protein FAM122B 0 188.34 5.32E-22 4390300 1530.1 1382.1 1632.9 1186.4 1755.4 1739.1 1520.6 1699.3 1319.3 1051.8 FALSE TRUE 1399.95696 1292.125039 1522.063298 1277.776734 1685.478701 1837.566339 1419.163548 1684.443199 1456.445956 1182.104925 1.184291623 1.093071361 1.287587308 1.080933432 1.425828339 1.554486663 1.20053941 1.424952358 1.23207841 1 10.20714238 -6.260105575 24.99286821 1.334681698 1.165593561 0.163260711 0.152631277 186.0581843 3486359.416 0.044226914 0.053993588 5.49E-07 6.260105575 -0.169088136 SSSAS(ph)SPEMK ddPTM_A459_MK2206_30min_R2 2 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSSAS(0.5)S(0.5)PEMK;SS(0.004)S(0.249)AS(0.744)S(0.004)PEMK 142.19 0.0012261 98868000 543070 604260 557830 589030 675060 449420 719430 611710 578040 694600 TRUE FALSE 584647.8567 574253.3271 576427.7738 540904.3648 648553.7525 466522.993 624967.9768 691662.5973 628316.8743 671935.2589 0.870095517 0.854625977 0.857862073 0.804994763 0.965202739 0.694297534 0.930101477 1.029358987 0.935085436 1 19.35796271 -7.514971892 24.6436525 0.985279406 0.843680013 0.501660249 0.066541198 251.8346723 784913.1642 0.028103548 0.017170725 3.06E-08 7.514971892 -0.141599393 SSSASS(ph)PEMK ddPTM_A459_MK2206_30min_R1 1 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSSAS(0.002)S(0.998)PEMK 118.23 0.021911 9128300 11682 12000 9932.5 9419 6261.6 6928.2 11478 12753 0 8411.6 TRUE FALSE 10688.38456 11218.79782 9258.309574 10144.45301 6012.187213 7320.468697 10712.32356 12641.50187 0 9453.692512 1.13060421 1.186710675 0.979332632 1.073067799 0.63596179 0.774350201 1.133136449 1.337202564 0 1 13.20666223 -6.10999113 9.286306316 0.844398578 1.094205353 0.137857121 0.33688158 0.844682201 65.5983276 0.098591372 0.12745907 7.76E-07 6.10999113 0.249806775 SSSASS(ph)PEMK ddPTM_A459_MK2206_30min_R2 3 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSSAS(0.006)S(0.994)PEMK;SSSAS(0.028)S(0.972)PEMK;SSSAS(0.024)S(0.976)PEMK 163.46 0.00039167 73692600 568488 562953 535540 585234 641223 449560 796421 647442 581018 784896 TRUE FALSE 612011.8784 534997.5726 553394.6363 537418.5101 616045.3631 466668.3208 691849.966 732064.8924 631553.8954 759284.9078 0.806037196 0.704607147 0.728836607 0.707795591 0.811349412 0.614615563 0.911186248 0.964150459 0.831774593 1 19.53428181 -7.359289777 7.736207627 0.925567571 0.730769458 0.687394476 0.065411262 0.163607342 11.51181018 0.025730874 0.017283959 4.37E-08 7.359289777 -0.194798113 SSSCGSGGGGIS(ph)PK ddPTM_A459_MK2206_30min_R2 1 SSSCGSGGGGISPK 14 0 F5GWH4;Q96EP1-2;Q96EP1-4;Q96EP1;F5H375 F5GWH4 CHFR E3 ubiquitin-protein ligase CHFR 1 SSSCGSGGGGIS(0.999)PK 83.869 0.026897 5080300 18869 18715 20169 19287 17205 13330 23469 12202 13470 19461 TRUE FALSE 20313.62515 17785.64031 20841.42439 17711.1904 16529.44525 13837.28249 20387.49211 13796.8433 14641.59625 18825.98916 1.079020336 0.944738689 1.107056007 0.940784054 0.878012045 0.735009585 1.082944005 0.732861534 0.777733171 1 14.20043805 -6.044361117 3.36514884 0.859284828 1.033843273 0.32751292 0.111511046 0.28482731 6.526966124 0.033023402 0.046640151 9.03E-07 6.044361117 0.174558444 SSSERS(ph)TPPYLFPEYPEASK ddPTM_A459_MK2206_30min_R2 1 SSSERSTPPYLFPEYPEASK 20 1 Q8TE76-2;Q8TE76-3;Q8TE76 Q8TE76-2 MORC4 MORC family CW-type zinc finger protein 4 1 S(0.108)S(0.108)S(0.108)ERS(0.508)T(0.158)PPY(0.01)LFPEYPEASK 70.986 0.0056673 3813800 13377 42095 25652 29232 39698 35262 35905 24378 35694 24224 TRUE FALSE 14401.15341 40004.62351 26507.22488 26843.65209 38139.25705 36603.92012 31190.63037 27564.2883 38798.5996 23433.57286 0.614552185 1.707149983 1.131164464 1.145521097 1.627547676 1.562028989 1.331023252 1.176273395 1.655684339 1 14.51628931 -4.745123471 24.99485098 1.374460557 0.614550014 0.469207763 0.241245977 855.7489163 1310877.881 0.05814385 1.541210322 1.80E-05 4.745123471 -0.759910543 SSSFS(ph)LPSR ddPTM_A459_MK2206_30min_R2 2 SSSFSLPSR 9 0 Q14153-2;Q14153 Q14153-2 FAM53B Protein FAM53B 1 S(0.001)S(0.001)S(0.07)FS(0.929)LPSR;S(0.035)S(0.018)S(0.274)FS(0.673)LPSR 164.66 0.00097838 18645100 85185 107522 90714 107918 117973 103554 118360 96563 107385 119673 TRUE FALSE 91706.8291 102182.6138 93738.35948 99100.75419 113340.7873 107494.82 102819.1898 109184.1157 116725.1532 115768.0798 0.792159888 0.882649293 0.809708165 0.856028314 0.979033145 0.928535916 0.888148011 0.943127983 1.008267161 1 16.820878 -5.080505132 0.240131451 1.013118712 0.663734229 0.691733635 0.040049259 5.843363459 0.331730552 0.068824882 0.605867944 8.31E-06 5.080505132 -0.349384484 SSSGESLAQS(ph)PDSSK ddPTM_A459_MK2206_30min_R1 2 SSSGESLAQSPDSSK 15 0 Q9H7U1-3;Q9H7U1-2;Q9H7U1 Q9H7U1-3 CCSER2 Serine-rich coiled-coil domain-containing protein 2 1 SSSGES(0.045)LAQS(0.763)PDS(0.182)S(0.01)K;SSS(0.004)GES(0.088)LAQS(0.896)PDS(0.009)S(0.003)K 169.02 6.22E-05 19719100 8033.6 7098.6 7230.8 7895.2 6323.3 7196.2 7324.4 7810.3 6391.5 6476 TRUE FALSE 7350.300134 6636.47985 6739.993442 8503.289672 6071.429571 7603.642625 6835.80264 7742.015371 7055.919297 7278.295771 1.009893025 0.911817829 0.926040059 1.168307793 0.834182858 1.044700966 0.939203744 1.063712662 0.969446629 1 12.82938496 SSSGESLAQS(ph)PDSSK ddPTM_A459_MK2206_30min_R2 2 SSSGESLAQSPDSSK 15 0 Q9H7U1-3;Q9H7U1-2;Q9H7U1 Q9H7U1-3 CCSER2 Serine-rich coiled-coil domain-containing protein 2 1 SSSGES(0.062)LAQS(0.886)PDS(0.041)S(0.011)K;SSS(0.001)GES(0.011)LAQS(0.759)PDS(0.222)S(0.007)K 234.36 2.16E-14 16243000 58097 72040 74627 71192 83372 67456 101060 75894 79555 102169 TRUE FALSE 62544.95099 68462.59836 77115.02693 65375.38587 80098.39637 70023.08535 87790.70061 85813.60638 86474.5501 98835.2339 0.632820387 0.692694251 0.78023822 0.661458301 0.810423502 0.708483024 0.888253077 0.868249135 0.874936464 1 16.59273782 -7.38031925 0.281797662 1.02714391 0.61156641 0.799679995 0.05002281 0.841539912 0.203408357 0.087500243 0.128365181 4.17E-08 7.38031925 -0.4155775 SSSGPVWSGASSACTS(ph)PAVGK ddPTM_A459_MK2206_30min_R2 1 SSSGPVWSGASSACTSPAVGK 21 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 SSSGPVWSGASSACT(0.208)S(0.792)PAVGK 174.23 5.67E-12 0 11407 11202 8721 10840 11105 9811.7 11871 6835.4 8319 11296 TRUE FALSE 12280.32869 10645.72497 9011.753787 9954.337325 10668.9619 10185.09112 10312.32344 7728.810249 9042.571583 10927.41245 1.123809388 0.974221942 0.824692381 0.910951003 0.976348422 0.932067969 0.943711377 0.707286404 0.827512609 1 13.4156642 -7.584535793 21.2310338 0.82553515 0.949511124 0.205454733 0.096698643 24.76434674 8525.738528 0.045543806 0.02629473 2.60E-08 7.584535793 0.123975974 SSSISEEKGDS(ph)DDEKPR ddPTM_A459_MK2206_30min_R1 2 SSSISEEKGDSDDEKPR 17 2 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SSS(0.001)IS(0.011)EEKGDS(0.988)DDEKPR;SSSIS(0.001)EEKGDS(0.999)DDEKPR 94.188 0.0078272 108180000 7702 10182.1 11938.7 9928.5 6697.1 5794.3 7166.4 6986.5 8555.9 8282.6 TRUE FALSE 7046.904455 9519.243439 11128.33431 10693.19479 6430.340326 6122.368259 6688.342532 6925.417767 9445.316423 9308.711018 0.757022583 1.02261671 1.195475323 1.148729912 0.690787405 0.657703118 0.718503617 0.743971722 1.014675008 1 13.1843657 -6.263767358 24.99945239 0.779855051 1.042116118 0.324670554 0.15749733 227.7131099 2445338.603 0.049830881 0.059225937 5.45E-07 6.263767358 0.262261067 SSSISEEKGDS(ph)DDEKPR ddPTM_A459_MK2206_30min_R2 2 SSSISEEKGDSDDEKPR 17 2 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SSS(0.004)IS(0.045)EEKGDS(0.951)DDEKPR;S(0.007)S(0.007)S(0.016)IS(0.014)EEKGDS(0.956)DDEKPR 66.674 0.033693 318810000 98650 79672 111234 74002 79525 43265 119399 77774 55872 119133 TRUE FALSE 106202.7198 75715.60433 114942.486 67955.79988 76402.44892 44911.47989 103721.7679 87939.32884 60731.64557 115245.7 0.921533037 0.65699288 0.997368978 0.589660177 0.662952708 0.389702001 0.900005535 0.763059523 0.526975372 1 16.8143534 -4.752114618 24.64041115 0.711340641 0.921533531 0.089516336 0.189986555 773.1932874 2042963.993 0.046076878 0.558982173 1.77E-05 4.752114618 0.21019289 SSSLDALDADS(ph)EGEGHSEPSHICYTPGSQSSSR ddPTM_A459_MK2206_30min_R2 1 SSSLDALDADSEGEGHSEPSHICYTPGSQSSSR 33 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 SSSLDALDADS(0.976)EGEGHS(0.015)EPS(0.009)HICYTPGSQSSSR 71.501 4.39E-05 5320400 7537 11400 9993.2 14953 16666 11342 12681 7852.8 7742.8 12504 TRUE FALSE 8114.038515 10833.89258 10326.3683 13731.29207 16011.6091 11773.62776 11015.96947 8879.187923 8416.254748 12095.9955 0.670803698 0.895659441 0.8537014 1.135193219 1.323711562 0.973349217 0.9107121 0.734060121 0.695788515 1 13.56224189 -11.07523835 15.63677442 1.000000008 0.923686026 0.015197062 0.191028413 5.65E-08 1.66E-09 0.205336402 0.049801388 8.41E-12 11.07523835 -0.076313982 SSSLDGEHHDGYHR ddPTM_A459_MK2206_30min_R2 1 SSSLDGEHHDGYHR 14 0 Q9C0J8 Q9C0J8 WDR33 pre-mRNA 3 end processing protein WDR33 0 85.672 0.0085405 1095000 1145.8 2413.7 696.74 3670.9 3139.7 6427.1 3996.5 946.84 3709.5 3125.9 FALSE TRUE 1233.523329 2293.839168 719.9689639 3370.975727 3016.419602 6671.687794 3471.754749 1070.595239 4032.145605 3023.902139 0.407924355 0.758569247 0.23809268 1.114776726 0.997525536 2.206317363 1.148104201 0.354044275 1.333424635 1 11.56219574 -5.830638806 7.288178721 1.177157238 0.498871638 0.340174901 0.444068634 0.277787172 24.42380844 0.133120044 0.199203216 1.48E-06 5.830638806 -0.6782856 SSSLEMTPYNT(ph)PQLSPATTPANKK ddPTM_A459_MK2206_30min_R1 1 SSSLEMTPYNTPQLSPATTPANKK 24 1 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08;B4DGD8;B0QZ65;A0A0A0MQV8 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 SSSLEMTPY(0.003)NT(0.667)PQLS(0.329)PATTPANKK 142.23 3.34E-08 40446000 2905.1 2691.7 3021.5 2236.6 2623.9 1931.2 2404.6 2551.1 2180.1 1651.7 TRUE FALSE 2658.00599 2516.469841 2816.408998 2408.86332 2519.384507 2040.542875 2244.193521 2528.796002 2406.729197 1856.325066 1.431864515 1.355619168 1.517196018 1.297651669 1.357189295 1.099237904 1.208944254 1.362259255 1.29650202 1 10.85823365 -6.279049197 1.90393506 1.221059429 1.420484867 0.437364414 0.109440282 0.361983642 2.581078237 0.038055137 0.049251115 5.26E-07 6.279049197 0.199425438 SSSLEMTPYNTPQLS(ph)PATTPANKK ddPTM_A459_MK2206_30min_R1 1 SSSLEMTPYNTPQLSPATTPANKK 24 1 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08;B4DGD8;B0QZ65;A0A0A0MQV8 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 SSSLEMTPYNT(0.001)PQLS(0.998)PATTPANKK 128.91 6.42E-08 39061000 4606.4 4084.7 4499.5 3487 4245 3134.3 3743.6 4614.9 3317.8 2801.3 TRUE FALSE 4214.601491 3818.785288 4194.086476 3755.569344 4075.912661 3311.761357 3493.871275 4574.552416 3662.697183 3148.346193 1.338671554 1.21294961 1.33215543 1.192870515 1.294620226 1.051905081 1.109748122 1.453001714 1.163371802 1 11.62037847 -6.166857944 1.725632554 1.18680996 1.28295931 0.141893424 0.123958919 0.940806032 5.548844456 0.043816627 0.063015956 6.81E-07 6.166857944 0.09614935 SSSLEMTPYNTPQLS(ph)PATTPANKK ddPTM_A459_MK2206_30min_R2 2 SSSLEMTPYNTPQLSPATTPANKK 24 1 Q14C86-4;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-3;H0Y4E7;H0Y7I9;C9IZ08;B4DGD8;B0QZ65;A0A0A0MQV8 Q14C86-4 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 SSSLEMTPYNTPQLS(0.998)PAT(0.001)TPANKK;SSSLEMTPYNTPQLS(1)PATTPANKK 126.25 7.76E-08 33725000 146246 217435 183684 210222 204203 180789 208121 168340 214768 195085 TRUE FALSE 157442.7062 206637.4941 189807.9329 193046.1901 196184.9642 187669.0521 180794.4627 190342.616 233448.1324 188719.3924 0.834268827 1.094945736 1.005768037 1.022927149 1.039559113 0.99443438 0.958006808 1.008601255 1.237011891 1 17.52588315 -8.044072836 24.21912858 1.119939692 0.999070437 0.26308874 0.082706784 410.7614695 225720.6333 0.051606479 0.019508716 9.03E-09 8.044072836 -0.120869255 SSSLESLQTAVAEVTLNGDIPFHRPR ddPTM_A459_MK2206_30min_R1 1 SSSLESLQTAVAEVTLNGDIPFHRPR 26 1 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 0 110.38 1.64E-08 1723200 622.93 489.58 713.69 444.98 502.55 498.35 813.19 336.25 608.15 896.29 FALSE TRUE 569.9465324 457.708253 665.2467113 479.2524367 482.5323693 526.5661463 758.9435788 333.3102017 671.3693688 1007.329172 0.565799689 0.454378038 0.660406479 0.47576547 0.479021538 0.522734932 0.753421622 0.330885088 0.666484589 1 9.976319484 -8.539985522 23.33249464 1.000000005 0.533448004 0.629241904 0.109197783 844.7382992 1152165.958 0.099281341 0.025640452 2.88E-09 8.539985522 -0.466552001 SSSLESLQTAVAEVTLNGDIPFHRPRPR ddPTM_A459_MK2206_30min_R1 1 SSSLESLQTAVAEVTLNGDIPFHRPRPR 28 2 F5GZI3;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 0 116.45 2.06E-12 1980400 751.23 532.34 563.48 520.36 613.89 393.37 649.96 543.85 434.52 437.04 FALSE TRUE 687.3339436 497.6845692 525.2325475 560.4382174 589.4374614 415.6422695 606.6023543 539.0951768 479.6899089 491.1838147 1.399341597 1.013234871 1.069319737 1.140994879 1.200034374 0.846205142 1.23498034 1.097542632 0.976599584 1 8.940119212 -4.755045013 24.99884746 1.072681612 1.399342141 0.46136844 0.10825691 196.9286425 769822.8433 0.026032869 0.239186795 1.76E-05 4.755045013 0.326660529 SSSLGNS(ph)PER ddPTM_A459_MK2206_30min_R1 1 SSSLGNSPER 10 0 Q5SQI0-7;Q5SQI0-6;Q5SQI0-5;Q5SQI0-4;Q5SQI0-3;Q5SQI0-2;Q5SQI0 Q5SQI0-7 ATAT1 Alpha-tubulin N-acetyltransferase 1 1 SSSLGNS(1)PER 132.86 0.0023684 3677100 1915.7 1845.1 1986.6 1801 1855 1816.8 2061.6 1654.7 1376.1 1885.4 TRUE FALSE 1752.759655 1724.983655 1851.755127 1939.713332 1781.111422 1919.665646 1924.074426 1640.233132 1519.150519 2118.977586 0.827172343 0.814064135 0.873890852 0.91540059 0.840552271 0.905939571 0.908020188 0.774068184 0.716926186 1 11.04915261 -9.903488138 16.6795456 1 0.845883493 0.381612512 0.060218906 0 0 0.062618542 0.015187227 1.25E-10 9.903488138 -0.154116507 SSSLGNS(ph)PER ddPTM_A459_MK2206_30min_R2 4 SSSLGNSPER 10 0 Q5SQI0-7;Q5SQI0-6;Q5SQI0-5;Q5SQI0-4;Q5SQI0-3;Q5SQI0-2;Q5SQI0 Q5SQI0-7 ATAT1 Alpha-tubulin N-acetyltransferase 1 1 SSS(0.007)LGNS(0.993)PER;SSSLGNS(1)PER;SSSLGNS(1)PER;SSSLGNS(1)PER 132.14 0.0036375 4426000 91305 91733 92057 116158 84037 95506 102963 88534 90808 102854 TRUE FALSE 98295.381 87177.67261 95126.13443 106667.5198 80737.28513 99140.54775 89443.83442 100105.6978 98706.3157 99497.8824 0.987914302 0.876176161 0.956061899 1.072058191 0.811447271 0.996408621 0.898952141 1.006108827 0.992044386 1 16.6023782 -7.788523593 24.94933477 0.999307509 0.942661833 0.129060313 0.067458966 467.4144292 430564.4957 0.035495516 0.017058222 1.63E-08 7.788523593 -0.056645676 SSSLIQLTSQNS(ph)SPNQQR ddPTM_A459_MK2206_30min_R2 2 SSSLIQLTSQNSSPNQQR 18 0 H7C419;O95639 H7C419 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 1 SSSLIQLT(0.056)S(0.056)QNS(0.444)S(0.444)PNQQR;SSSLIQLT(0.001)S(0.002)QNS(0.879)S(0.119)PNQQR 165.24 2.43E-07 11058100 40307 46918 40999 51340 54508 52171 54407 46815 44969 45759 TRUE FALSE 43392.93491 44588.12035 42365.8862 47145.35777 52367.74204 54156.40396 47263.29555 52933.88124 48880.32233 44265.88758 0.980279337 1.007279483 0.957077527 1.065049417 1.183027042 1.223434272 1.067713721 1.195816556 1.104243584 1 15.43390773 -5.988158485 4.214849309 1.139971112 0.985442752 0.51976708 0.062859902 0.148747888 6.296829333 0.017649207 0.025633459 1.03E-06 5.988158485 -0.154528359 SSSLIQLTSQNSS(ph)PNQQR ddPTM_A459_MK2206_30min_R2 1 SSSLIQLTSQNSSPNQQR 18 0 H7C419;O95639 H7C419 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 1 SSSLIQLTS(0.001)QNS(0.396)S(0.603)PNQQR 144.15 0.00028721 7569400 33510 36529 36529 41650 39757 40145 42178 31958 33165 42248 TRUE FALSE 36075.55136 34715.02298 37746.85863 38247.06177 38195.94042 41672.74611 36639.97794 36135.02033 36049.63175 40869.45122 0.882702123 0.849412506 0.923595926 0.935834973 0.934584128 1.019655142 0.896512599 0.884157219 0.882067918 1 15.31873525 -5.343736094 5.347354368 0.932689207 0.866331543 0.284381243 0.043505788 0.283116673 13.60758006 0.012016662 0.025933285 4.53E-06 5.343736094 -0.066357664 SSSMS(ph)SLTGAYASGIPSSSR ddPTM_A459_MK2206_30min_R2 1 SSSMSSLTGAYASGIPSSSR 20 0 Q96HA1;Q96HA1-2;Q96HA1-3 Q96HA1 POM121 Nuclear envelope pore membrane protein POM 121 1 SSS(0.231)MS(0.628)S(0.141)LTGAYASGIPSSSR 280.26 6.42E-72 6465000 10175 13513 13957 16161 11350 10786 17715 14164 14677 11863 TRUE FALSE 10954.00582 12841.96407 14422.31941 14840.5946 10904.34197 11196.46879 15388.99922 16015.28343 15953.57893 11475.91128 0.954521654 1.119036541 1.256747204 1.293195306 0.950193994 0.975649647 1.340982763 1.395556574 1.390179702 1 13.4863211 -7.279792739 24.60633302 1.314642834 1.10305482 0.258881125 0.152852071 898.3758713 1204446.178 0.065784823 0.044448921 5.25E-08 7.279792739 -0.211588015 SSSMSYVDGFIGT(ph)WPK ddPTM_A459_MK2206_30min_R2 1 SSSMSYVDGFIGTWPK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 SSSMSYVDGFIGT(1)WPK 138.98 0.0009431 2571300 12254 15386 15940 13102 10196 12354 12488 12368 9778.8 13205 TRUE FALSE 13192.17566 14621.95361 16471.43164 12031.52469 9795.653809 12824.14013 10848.3106 13984.54007 10629.34235 12774.12193 1.032726612 1.144654301 1.289437484 0.941867062 0.766835784 1.003915588 0.849241197 1.094755486 0.832099647 1 13.64093651 -5.853087878 8.304705368 0.92304773 1.153898571 0.492223959 0.106466329 0.202075461 16.13499294 0.029293768 0.04361248 1.40E-06 5.853087878 0.230850841 SSSNDS(ph)VDEETAESDTSPVLEK ddPTM_A459_MK2206_30min_R1 2 SSSNDSVDEETAESDTSPVLEK 22 0 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 S(0.056)S(0.056)S(0.015)NDS(0.873)VDEETAESDTSPVLEK;S(0.066)S(0.066)S(0.013)NDS(0.582)VDEET(0.272)AESDTSPVLEK 144.95 4.04E-07 11903500 5182.5 5677.5 5458.2 4621.6 4407.7 4315.3 4894.1 4489.4 4301.8 4078.7 TRUE FALSE 4741.701161 5307.893718 5087.712591 4977.556433 4232.131976 4559.628557 4567.623519 4450.149649 4748.987504 4584.000149 1.034402488 1.15791744 1.10988491 1.085854335 0.92323993 0.994683335 0.996427437 0.970800503 1.035992005 1 12.16239138 -6.120986439 6.162982846 0.986559336 1.105031518 0.66190553 0.038608027 0.133828593 6.212595757 0.011086452 0.014426436 7.57E-07 6.120986439 0.118472182 SSSNDS(ph)VDEETAESDTSPVLEK ddPTM_A459_MK2206_30min_R2 1 SSSNDSVDEETAESDTSPVLEK 22 0 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 S(0.123)S(0.123)S(0.123)NDS(0.631)VDEETAESDTSPVLEK 59.565 0.011182 3553100 30300 32944 30738 37094 32142 32417 36683 33927 29675 37187 TRUE FALSE 32619.7913 31308.04887 31762.78958 34063.30154 30879.94358 33650.65165 31866.47804 38361.37539 32256.07786 35973.59124 0.9067705 0.870306461 0.88294742 0.946897443 0.858405917 0.935426531 0.88582977 1.06637603 0.896659932 1 15.13465057 -7.72584546 24.99987279 0.986138664 0.898220571 0.442668809 0.046059378 145.0133454 101852.0735 0.019933799 0.011508252 1.88E-08 7.72584546 -0.087918093 SSSPAGET(ph)EGDREPQARPGEGTAPLPPPGQK ddPTM_A459_MK2206_30min_R1 1 SSSPAGETEGDREPQARPGEGTAPLPPPGQK 31 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.009)S(0.009)S(0.039)PAGET(0.941)EGDREPQARPGEGT(0.002)APLPPPGQK 79.558 5.64E-05 31242000 2121.8 2033.3 1980.9 2208.9 2229.8 1929.6 1854.4 2099 1642.6 1510.4 TRUE FALSE 1941.329768 1900.9318 1846.442027 2379.029861 2140.982344 2038.852284 1730.69636 2080.648664 1813.354148 1697.519755 1.143627202 1.119828971 1.087729331 1.401474035 1.26124149 1.201077206 1.019544164 1.225699235 1.068237435 1 10.72921265 -7.167171021 9.452004123 1.097274817 1.205498065 0.263174647 0.09970008 0.696783523 65.35088532 0.040339145 0.031239718 6.81E-08 7.167171021 0.108223247 SSSPAGET(ph)EGDREPQARPGEGTAPLPPPGQK ddPTM_A459_MK2206_30min_R2 4 SSSPAGETEGDREPQARPGEGTAPLPPPGQK 31 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.049)S(0.049)S(0.125)PAGET(0.776)EGDREPQARPGEGT(0.002)APLPPPGQK;S(0.079)S(0.079)S(0.385)PAGET(0.457)EGDREPQARPGEGT(0.001)APLPPPGQK;S(0.063)S(0.063)S(0.215)PAGET(0.582)EGDREPQARPGEGT(0.076)APLPPPGQK;S(0.083)S(0.083)S(0.306)PAGET(0.525)EGDREPQARPGEGT(0.002)APLPPPGQK 75.404 0.00010196 60649900 50969.3 82552 67645 76782 78965 66727 73060 54414.8 66411 66017 TRUE FALSE 54871.5488 78452.58772 69900.25054 70508.66499 75864.43733 69266.34274 63467.13424 61527.00119 72187.30874 63862.8707 0.85920893 1.228453824 1.094536618 1.104063507 1.18792714 1.084610541 0.993803341 0.963423669 1.130348635 1 15.96268978 -7.129486149 5.424847661 1.019458448 1.105670137 0.104389953 0.099634933 0.459045259 18.34218502 0.037006697 0.028560259 7.42E-08 7.129486149 0.086211689 SSSPAPADIAQTVQEDLR ddPTM_A459_MK2206_30min_R1 1 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 0 260.29 1.81E-41 5651000 568.77 705.73 653.58 639.89 848.42 506.36 530.08 589.37 773.35 522.64 FALSE TRUE 520.3931248 659.7868487 609.2168106 689.1744387 814.6256348 535.0296656 494.7193304 584.2172002 853.7425 587.3885889 0.885943538 1.123254454 1.037161467 1.173285371 1.386859824 0.910861525 0.842235174 0.994600868 1.45345435 1 9.198171429 -4.757031111 24.42412914 1.097191985 0.885943121 0.109607797 0.18455262 253.3320756 1403348.86 0.047499155 0.361317812 1.75E-05 4.757031111 -0.211248864 SSSPAPADIAQTVQEDLR ddPTM_A459_MK2206_30min_R2 1 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 0 142.57 0.0011837 0 3515.5 6362.8 5144.3 4632 7487.6 4872.7 3933.2 5417.1 4969.7 3947.5 FALSE TRUE 3784.649383 6046.832604 5315.808394 4253.550783 7193.599202 5058.134013 3416.766115 6125.13357 5401.955523 3818.693398 0.991084905 1.58348209 1.392049018 1.113875962 1.883785487 1.324571911 0.894747433 1.603986739 1.414608338 1 11.89886338 -6.996647961 24.99877485 1.254523795 1.409529792 0.061174725 0.293251352 337.6081586 2517779.822 0.103197248 0.090567969 1.01E-07 6.996647961 0.155005997 SSSPATEQS(ph)WMENDFDELREEGFR ddPTM_A459_MK2206_30min_R1 2 SSSPATEQSWMENDFDELREEGFR 24 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.001)S(0.003)S(0.005)PAT(0.005)EQS(0.986)WMENDFDELREEGFR;S(0.002)S(0.008)S(0.172)PAT(0.019)EQS(0.801)WMENDFDELREEGFR 69.081 0.0010112 15631800 533.9 540.95 524.25 266.19 551.24 776.02 598.65 345.78 384.61 292.926 TRUE FALSE 488.4890014 505.7340567 488.6653706 286.6919999 529.2829435 819.9575818 558.7151508 342.7568819 424.5915858 329.2158844 1.483795359 1.536177568 1.484331084 0.870832829 1.607707795 2.49063797 1.697108728 1.041131058 1.289705649 1 8.362890136 -5.514204088 24.52761435 1.46858172 1.510053502 0.000144968 0.43693648 6962.20259 19685638.31 0.129076794 0.23945872 3.06E-06 5.514204088 0.041471783 SSSPNS(ph)PLPMFR ddPTM_A459_MK2206_30min_R1 2 SSSPNSPLPMFR 12 0 A0A0U1RR27;Q7Z401;Q7Z401-2;H3BTW5 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.067)S(0.001)S(0.008)PNS(0.924)PLPMFR;S(0.001)SS(0.001)PNS(0.998)PLPMFR 156.6 0.00043685 8863400 2164.7 1951.84 1838.93 1936.3 2022 2071.98 2344.8 2190.2 1700.97 1872.94 TRUE FALSE 1980.580898 1824.774861 1714.108555 2085.434162 1941.459458 2189.293717 2188.38267 2171.051312 1877.791918 2104.973947 0.940905183 0.866887148 0.81431343 0.990717327 0.922319947 1.040057394 1.039624587 1.031391061 0.89207371 1 11.03958666 -5.780737375 24.93224637 0.990914412 0.873320457 0.483598344 0.053920554 189.0486349 244242.6908 0.015617 0.023203466 1.66E-06 5.780737375 -0.117593955 SSSPNS(ph)PLPMFR ddPTM_A459_MK2206_30min_R2 3 SSSPNSPLPMFR 12 0 A0A0U1RR27;Q7Z401;Q7Z401-2;H3BTW5 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.134)S(0.004)S(0.04)PNS(0.821)PLPMFR;SSS(0.004)PNS(0.996)PLPMFR;S(0.003)SS(0.04)PNS(0.957)PLPMFR 150.22 0.00055523 9002200 26830.6 36660 39557 40404 36124 34293.5 36963 28503.3 38073 34769 TRUE FALSE 28884.77137 34839.51771 40875.81064 37102.86395 34705.59025 35598.56317 32109.7137 32228.77918 41384.52072 33634.49038 0.858784273 1.035827132 1.215294484 1.103119552 1.031845283 1.058394605 0.954666277 0.958206258 1.23041914 1 15.03765378 -4.781054602 4.673787772 1.066524223 0.846614998 0.327432267 0.089683499 0.216760878 10.81337969 0.023079233 0.152379165 1.66E-05 4.781054602 -0.219909225 SSSQPS(ph)SCCSDPSKPGGNVEGATQSLAEQMR ddPTM_A459_MK2206_30min_R2 2 SSSQPSSCCSDPSKPGGNVEGATQSLAEQMR 31 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 SSS(0.001)QPS(0.434)S(0.339)CCS(0.095)DPS(0.119)KPGGNVEGAT(0.009)QS(0.003)LAEQMR;SSS(0.003)QPS(0.439)S(0.439)CCS(0.109)DPS(0.011)KPGGNVEGATQSLAEQMR 88.186 5.21E-07 28592200 105343 101000 100400 102524 99971 87665 115064 89075 95473 110698 TRUE FALSE 113408.1411 95984.48687 103747.2859 94147.46124 96045.63623 91001.153 99955.95858 100717.4083 103777.069 107085.9333 1.059038639 0.896331422 0.968822726 0.879176735 0.896902452 0.849795582 0.933418195 0.940528837 0.96910085 1 16.70840946 -10.3106023 7.728932638 0.999999996 0.927774186 0.110736935 0.05585862 3.88E-11 0 0.053715585 0.013027943 4.89E-11 10.3106023 -0.072225811 SSSQPSS(ph)CCSDPSKPGGNVEGATQSLAEQMR ddPTM_A459_MK2206_30min_R1 2 SSSQPSSCCSDPSKPGGNVEGATQSLAEQMR 31 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 S(0.011)S(0.003)S(0.056)QPS(0.09)S(0.396)CCS(0.396)DPS(0.047)KPGGNVEGATQSLAEQMR;SSS(0.001)QPS(0.175)S(0.541)CCS(0.108)DPS(0.175)KPGGNVEGATQSLAEQMR 152.29 1.68E-20 65465300 3681.96 3081.82 3024.03 2603.94 2700.15 2484.29 3138.03 2824.93 2622.08 2431.16 TRUE FALSE 3368.789967 2881.192958 2818.767269 2804.49591 2592.597308 2624.948353 2928.697744 2800.231935 2894.654599 2732.350455 1.232927482 1.054474163 1.03162728 1.026404173 0.948852408 0.960692413 1.071860214 1.024843621 1.059400925 1 11.41592682 -4.507490177 1.710471608 1.013298362 1.46919197 0.760086791 0.036487327 1.112703575 1.795326043 0.010826991 1.042179011 3.11E-05 4.507490177 0.455893607 SSSQPSS(ph)CCSDPSKPGGNVEGATQSLAEQMR ddPTM_A459_MK2206_30min_R2 3 SSSQPSSCCSDPSKPGGNVEGATQSLAEQMR 31 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 SSS(0.001)QPS(0.11)S(0.389)CCS(0.389)DPS(0.11)KPGGNVEGATQSLAEQMR;S(0.002)S(0.002)S(0.014)QPS(0.207)S(0.322)CCS(0.322)DPS(0.127)KPGGNVEGAT(0.003)QS(0.001)LAEQMR;SSS(0.003)QPS(0.049)S(0.449)CCS(0.449)DPS(0.049)KPGGNVEGATQSLAEQMR 87.868 5.46E-07 194567000 175830 166803 160188 153431 158923 133773 172794 139615 139655 153933 TRUE FALSE 189291.68 158519.8056 165528.588 140895.1965 152682.8845 138863.8253 150105.9402 157863.1599 151801.9395 148910.1788 1.271180261 1.064533042 1.111600223 0.946175726 1.025335445 0.932534138 1.008030085 1.060123365 1.019419496 1 17.18408285 SSSQPSSCCSDPS(ph)KPGGNVEGATQSLAEQMR ddPTM_A459_MK2206_30min_R1 2 SSSQPSSCCSDPSKPGGNVEGATQSLAEQMR 31 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 S(0.001)S(0.001)S(0.005)QPS(0.045)S(0.122)CCS(0.122)DPS(0.704)KPGGNVEGATQSLAEQMR;SSSQPS(0.007)S(0.017)CCS(0.044)DPS(0.884)KPGGNVEGAT(0.034)QS(0.013)LAEQMR 92.901 1.50E-07 65768900 3233.7 2827.4 3119.3 2647.76 2486.25 2489.94 3419 2731.6 2915.8 2669.81 TRUE FALSE 2958.656834 2643.335746 2907.570607 2851.690934 2387.217398 2630.918251 3190.924748 2707.717909 3218.907844 3000.566219 0.986032841 0.880945646 0.969007312 0.95038427 0.795588973 0.876807262 1.063440869 0.902402317 1.072766808 1 11.55101905 -8.257660628 24.86144167 1.036383408 0.927000092 0.274527541 0.070408913 380.8620916 2505843.459 0.05307116 0.018355485 5.53E-09 8.257660628 -0.109383315 SSSQPSSCCSDPS(ph)KPGGNVEGATQSLAEQMR ddPTM_A459_MK2206_30min_R2 2 SSSQPSSCCSDPSKPGGNVEGATQSLAEQMR 31 1 Q13501;Q13501-2;E7EMC7 Q13501 SQSTM1 Sequestosome-1 1 SSS(0.002)QPS(0.021)S(0.054)CCS(0.14)DPS(0.762)KPGGNVEGAT(0.015)QS(0.006)LAEQMR;S(0.001)S(0.001)S(0.009)QPS(0.267)S(0.267)CCS(0.071)DPS(0.382)KPGGNVEGATQSLAEQMR 84.107 1.10E-06 7684800 32621 34942 31383 29548 30825 25164 35997 27668 29450 34257 TRUE FALSE 35118.48884 33206.83109 32429.29356 27133.83388 29614.65562 26121.63365 31270.55066 31284.3026 32011.50777 33139.1969 1.059726612 1.002040912 0.978578137 0.818783689 0.893644336 0.788239792 0.943612205 0.94402718 0.965971139 1 15.01625102 -5.553882892 7.731188722 0.900953225 1.021124938 0.387820657 0.062518202 0.194668327 39.67255415 0.017556431 0.03087249 2.79E-06 5.553882892 0.120171713 SSSQSTFHIPLS(ph)PVEVKPGNVR ddPTM_A459_MK2206_30min_R2 2 SSSQSTFHIPLSPVEVKPGNVR 22 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 SSSQSTFHIPLS(0.999)PVEVKPGNVR;SSSQSTFHIPLS(1)PVEVKPGNVR 80.733 0.00048674 41788000 165544 375600 231780 462210 474370 451330 399300 230250 331140 192781 TRUE FALSE 178218.1759 356948.2502 239507.4295 424445.9645 455743.8503 468505.6794 346871.4304 260344.4656 359941.9586 186490.5718 0.955641748 1.914028397 1.284287067 2.275964734 2.4437903 2.512221798 1.85999446 1.396019451 1.930081265 1 17.50874317 -5.751883376 24.99392138 1.977760096 1.43758993 0.190274438 0.488375717 336.4293982 879929.2164 0.13591856 0.231582049 1.77E-06 5.751883376 -0.540170166 SSSS(ph)DSIHSVR ddPTM_A459_MK2206_30min_R2 2 SSSSDSIHSVR 11 0 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 S(0.075)S(0.039)S(0.221)S(0.646)DS(0.02)IHSVR;SS(0.073)S(0.325)S(0.601)DS(0.001)IHSVR 139.76 0.001142 216490000 221142 404320 239947 630290 566660 643840 518640 370882 520080 347130 TRUE FALSE 238072.8015 384242.0567 247946.7132 578793.2908 544410.0812 668341.7824 450541.945 419357.5508 565315.6183 335803.1765 0.708965305 1.144247832 0.738369171 1.723608742 1.621217782 1.990278321 1.341684583 1.248819488 1.683473111 1 18.35725635 -5.759987207 24.99999984 1.542885285 0.891899395 0.524699366 0.283040611 30.06848958 517625.2161 0.077642515 0.125750018 1.74E-06 5.759987207 -0.65098589 SSSS(ph)ELLLTGPGAEEDPLPLIVQDQYVQEAR ddPTM_A459_MK2206_30min_R1 1 SSSSELLLTGPGAEEDPLPLIVQDQYVQEAR 31 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 S(0.101)S(0.101)S(0.373)S(0.424)ELLLTGPGAEEDPLPLIVQDQYVQEAR 75.965 1.95E-05 705910 0 0 0 0 81.374 0 0 0 0 0 TRUE FALSE 0 0 0 0 78.13270127 0 0 0 0 0 0 SSSS(ph)GSLNAR ddPTM_A459_MK2206_30min_R2 1 SSSSGSLNAR 10 0 H0Y7V5;Q7Z3E2 H0Y7V5 CCDC186 Coiled-coil domain-containing protein 186 1 S(0.001)S(0.004)S(0.058)S(0.469)GS(0.469)LNAR 89.805 0.030327 5108200 26239 26337 24908 24299 25142 21852 26610 24947 18510 22436 TRUE FALSE 28247.87801 25029.14288 25738.42029 22313.69397 24154.79875 22683.59317 23116.07504 28207.65856 20119.96634 21703.91516 1.301510709 1.153208658 1.185888357 1.028095337 1.112923571 1.045138308 1.065064753 1.299657613 0.927020134 1 14.40566769 -3.410328584 0.760016246 1.081786535 2.809419287 0.348788919 0.095059951 21.41944388 1.835739186 0.034035635 50.26319687 0.000388751 3.410328584 1.727632753 SSSS(ph)PELQTLQDILGDPGDKADVGR ddPTM_A459_MK2206_30min_R2 1 SSSSPELQTLQDILGDPGDKADVGR 25 1 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 1 S(0.117)S(0.117)S(0.146)S(0.618)PELQT(0.003)LQDILGDPGDKADVGR 117.66 4.27E-08 3473100 13132 16771 14520 18412 16951 15060 20399 12974 17537 18867 TRUE FALSE 14137.39602 15938.17653 15004.08955 16907.6807 16285.41857 15633.11885 17720.5868 14669.74635 19062.33656 18251.37134 0.774593632 0.873259123 0.822080121 0.926378648 0.892284655 0.85654489 0.970918101 0.803761322 1.044433112 1 14.15571725 -1.52287875 0.097762957 1.071068136 0.317732082 0.449132377 0.062177719 128.6833509 0.897985288 0.813079383 12.99401292 0.03 1.52287875 -0.753336054 SSSS(ph)PLVVVSVK ddPTM_A459_MK2206_30min_R2 1 SSSSPLVVVSVK 12 0 Q96B01-3;Q96B01-2;Q96B01 Q96B01-3 RAD51AP1 RAD51-associated protein 1 1 S(0.041)S(0.019)S(0.138)S(0.802)PLVVVSVK 120.87 0.0039255 2668900 20583 15921 18778 20233 20306 16406 21777 16257 12733 21574 TRUE FALSE 22158.85031 15130.38629 19404.04915 18579.89918 19508.68441 17030.34183 18917.65374 18381.84572 13840.49332 20870.04215 1.06175398 0.724981109 0.929756107 0.89026649 0.934769766 0.816018564 0.906450193 0.880776646 0.66317515 1 14.34914589 -8.038320906 24.98330766 0.811717025 0.888393196 0.03992912 0.111221386 1475.583838 961997.7753 0.068375823 0.025856532 9.16E-09 8.038320906 0.076676171 SSSS(ph)PTEATEK ddPTM_A459_MK2206_30min_R2 1 SSSSPTEATEK 11 0 E7EME3;Q9UBG0 E7EME3 MRC2 C-type mannose receptor 2 1 S(0.031)S(0.031)S(0.218)S(0.72)PTEATEK 85.924 0.034189 6517600 29396 30150 29708 26541 21190 27965 36893 27647 32112 27565 TRUE FALSE 31646.58036 28652.79484 30698.44989 24372.5154 20357.97413 29029.22767 32048.90478 31260.55783 34905.04371 26665.55631 1.18679618 1.074524548 1.151239807 0.914007385 0.763455819 1.088641367 1.201883974 1.172319732 1.308993644 1 14.70268981 -7.003199095 24.99955961 1.179459817 1.013097019 0.227554444 0.132176517 197.6449367 1544521.592 0.050271121 0.043489892 9.93E-08 7.003199095 -0.166362798 SSSS(ph)SASPSSPSSREEK ddPTM_A459_MK2206_30min_R1 1 SSSSSASPSSPSSREEK 17 1 E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.028)S(0.034)S(0.034)S(0.407)S(0.407)AS(0.075)PS(0.006)S(0.006)PS(0.002)S(0.001)REEK 66.059 0.023108 23749000 569.18 222.61 226.71 240.91 873.66 824.64 665.26 591.14 0 118.56 TRUE FALSE 520.7682521 208.1180485 211.3215569 259.4649299 838.8602722 871.3304042 620.8817192 585.9717253 0 133.2481079 3.908260015 1.561883706 1.585925385 1.947231627 6.295476052 6.539157801 4.659591263 4.397598845 0 1 7.057971237 -4.479478507 21.79342956 3.348697682 8.848111981 0.001277638 2.160451541 1959.805195 1067537.007 0.561003704 41178.84565 3.32E-05 4.479478507 5.499414299 SSSS(ph)SQESLNRPFSSK ddPTM_A459_MK2206_30min_R2 1 SSSSSQESLNRPFSSK 16 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 SSS(0.002)S(0.499)S(0.499)QESLNRPFSSK 223.68 1.64E-10 46686000 81553 91032 69736 84319 88031 75765 93052 69250 80161 81601 TRUE FALSE 87796.76038 86511.48325 72060.96343 77429.86798 84574.46062 78648.29017 80834.16062 78301.21277 87133.25888 78938.36605 1.112219125 1.095937091 0.912876299 0.980890179 1.071398673 0.996325286 1.024016136 0.991928471 1.103813814 1 16.26843904 -5.034162044 24.72063549 1.01057061 1.108148681 0.375352099 0.048661075 467.2954347 338149.3056 0.012365092 0.032762154 9.24E-06 5.034162044 0.097578071 SSSS(ph)SQESLNRPLSAK ddPTM_A459_MK2206_30min_R2 1 SSSSSQESLNRPLSAK 16 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 SSSS(0.5)S(0.5)QESLNRPLSAK 216.71 6.47E-10 7066500 36015 33915 31722 32342 28645 28346 35330 26210 25924 30624 TRUE FALSE 38772.33609 32230.83042 32779.59565 29699.55514 27520.25337 29424.72689 30691.12856 29635.73699 28178.82266 29624.74139 1.308782264 1.087970018 1.1064939 1.002525381 0.92896181 0.993248397 1.035996506 1.000371163 0.951192191 1 14.85451494 -1.5228791 0.716902225 0.986104091 46.067596 0.8665269 0.037602517 109.5339533 0.542620666 0.015252695 7937.047845 0.029999976 1.5228791 45.08149191 SSSSAS(ph)DGESEGKR ddPTM_A459_MK2206_30min_R1 1 SSSSASDGESEGKR 14 1 K7EJD2;A0A0A0MR03;Q9Y5B0;A0A0J9YWJ4;A0A0J9YWB6;Q9Y5B0-4 K7EJD2 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 SSS(0.004)S(0.009)AS(0.983)DGES(0.003)EGKR 121.95 0.0033127 946870 977.72 601.71 366.78 728.61 341.5 295.34 606.51 1188.9 160.39 415.89 TRUE FALSE 894.5597798 562.5385696 341.8839955 784.7276684 327.8973319 312.0618956 566.0508245 1178.505573 177.0631145 467.413593 1.913850588 1.203513501 0.731437854 1.67887216 0.701514326 0.667635474 1.211027734 2.521333548 0.378814645 1 8.86855588 -4.766529064 5.522087516 1.14719548 1.947941166 0.14221549 0.582141694 0.305110385 29.75802327 0.143779671 0.929270003 1.71E-05 4.766529064 0.800745686 SSSSAS(ph)DGESEGKR ddPTM_A459_MK2206_30min_R2 1 SSSSASDGESEGKR 14 1 K7EJD2;A0A0A0MR03;Q9Y5B0;A0A0J9YWJ4;A0A0J9YWB6;Q9Y5B0-4 K7EJD2 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 S(0.018)S(0.071)S(0.022)S(0.071)AS(0.818)DGESEGKR 75.143 0.023049 5567700 8775 7161.6 7030.2 9403.5 10116 5584.3 9657.9 13603 10316 9406 TRUE FALSE 9446.820747 6805.965358 7264.583359 8635.20397 9718.795011 5796.81445 8389.806129 15380.95881 11213.26703 9099.08299 1.038216791 0.747983656 0.798386317 0.949019146 1.068107085 0.637076775 0.922049633 1.690385594 1.232351331 1 13.15150544 -7.628821165 8.755491107 1.344377164 0.868491952 0.488589328 0.199797714 0.192484808 14.51180908 0.090084682 0.051835004 2.35E-08 7.628821165 -0.475885212 SSSSGDQSSDSLNS(ph)PTLLAL ddPTM_A459_MK2206_30min_R1 2 SSSSGDQSSDSLNSPTLLAL 20 0 P15408;P15408-3;P15408-2 P15408 FOSL2 Fos-related antigen 2 1 SSSSGDQSSDSLNS(0.978)PT(0.022)LLAL;SSSSGDQSSDSLNS(0.814)PT(0.186)LLAL 141.38 5.94E-05 8954100 1454.25 1322.67 1281.08 1003.81 1428.43 1066.11 1314.34 1257.42 952.67 978.11 TRUE FALSE 1330.558401 1236.563943 1194.123859 1081.12362 1371.532608 1126.472227 1226.662777 1246.42651 1051.703456 1099.285651 1.21038458 1.124879545 1.086272579 0.983478333 1.247658065 1.024731129 1.115872636 1.133851341 0.956715349 1 10.10235061 -6.676527765 0.017223657 2.48E-07 2.192047025 0.244037986 0.079979478 1388.279915 8.835009158 533.4475865 589.6978774 2.11E-07 6.676527765 2.192046777 SSSSGDQSSDSLNS(ph)PTLLAL ddPTM_A459_MK2206_30min_R2 2 SSSSGDQSSDSLNSPTLLAL 20 0 P15408;P15408-3;P15408-2 P15408 FOSL2 Fos-related antigen 2 1 SSSSGDQSSDSLNS(0.573)PT(0.427)LLAL;SSSSGDQSSDSLNS(0.861)PT(0.138)LLAL 119.25 0.00025531 5973600 22851.8 22226.9 24186.9 31044 30742 27142.2 33135 24569.5 26830 31401.5 TRUE FALSE 24601.35138 21123.14447 24993.27917 28507.6059 29534.91461 28175.11544 28784.3347 27780.81801 29163.6249 30376.87163 0.809871131 0.695369317 0.822773309 0.938464179 0.972282958 0.927518666 0.947574031 0.91453848 0.960060182 1 14.89068568 -5.641963681 3.195539493 0.948527108 0.752634363 0.850611033 0.034460243 0.078824334 1.586086936 0.009085707 0.017179362 2.28E-06 5.641963681 -0.195892745 SSSSS(ph)QESLNRPFSSK ddPTM_A459_MK2206_30min_R1 4 SSSSSQESLNRPFSSK 16 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 S(0.006)S(0.002)SS(0.003)S(0.989)QESLNRPFSSK;SSSS(0.02)S(0.98)QESLNRPFSSK;S(0.002)S(0.006)S(0.063)S(0.258)S(0.656)QES(0.007)LNRPFS(0.006)S(0.002)K;SSSS(0.063)S(0.937)QESLNRPFSSK 309.15 3.13E-101 118194400 17311.9 14858.2 14486.2 13043.8 15498.4 14422.9 16731.9 15555.3 15055.8 13663.4 TRUE FALSE 15839.432 13890.92848 13502.9171 14048.43574 14881.06591 15239.51213 15615.74548 15419.30165 16620.90429 15356.12515 1.03147323 0.904585522 0.879317991 0.914842488 0.96906386 0.992406091 1.016906631 1.004114092 1.08236317 1 13.9065266 -6.791877074 1.600467866 1.027434108 0.927593108 0.48120677 0.043103448 0.322991695 1.715490809 0.019452516 0.017257345 1.61E-07 6.791877074 -0.099841 SSSSS(ph)QESLNRPFSSK ddPTM_A459_MK2206_30min_R2 2 SSSSSQESLNRPFSSK 16 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 SSSS(0.003)S(0.997)QESLNRPFSSK;SS(0.001)SS(0.185)S(0.813)QESLNRPFSSK 254.53 3.02E-29 67725000 146200 145040 115007 163515 156437 142341 162993 139461 134467 151422 TRUE FALSE 157393.1844 137837.5245 118841.276 150155.3014 150294.4973 147757.8865 141591.8233 157689.0315 146162.6966 146481.1125 1.074494736 0.940991791 0.811307847 1.025083022 1.026033287 1.008716304 0.966621709 1.076514431 0.997826232 1 17.16035513 SSSSS(ph)QESLNRPLSAK ddPTM_A459_MK2206_30min_R1 2 SSSSSQESLNRPLSAK 16 1 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 SSSS(0.029)S(0.968)QES(0.003)LNRPLSAK;SSS(0.003)S(0.021)S(0.976)QESLNRPLSAK 154.51 0.0019258 3246700 5496.9 5535.7 5878.1 4778 4814.7 4363.6 4585.7 4472 4186.3 4094.9 TRUE FALSE 5029.35979 5175.324924 5479.110949 5146.002388 4622.920304 4610.663261 4279.79632 4432.901775 4621.480866 4602.207127 1.092814741 1.124531074 1.190539843 1.118159667 1.004500705 1.001837408 0.929944308 0.96321214 1.004187934 1 12.1681102 -6.300520831 2.886681061 0.976105961 1.138268719 0.850013277 0.030549938 0.09972551 1.659677206 0.010512181 0.01280215 5.01E-07 6.300520831 0.162162759 SSSSSAAAS(ph)TPPPGPPAPADPLGYLPLHGGYQYK ddPTM_A459_MK2206_30min_R2 1 SSSSSAAASTPPPGPPAPADPLGYLPLHGGYQYK 34 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 SSS(0.001)S(0.001)S(0.003)AAAS(0.542)T(0.453)PPPGPPAPADPLGYLPLHGGYQYK 104.83 4.60E-14 5391600 26386 32297 30151 39684 37849 34288 45090 35040 34550 41788 TRUE FALSE 28406.13245 30693.17794 31156.21929 36441.69026 36362.85808 35592.85387 39169.62884 39619.84831 37555.09655 40424.46098 0.702696629 0.759272411 0.770726895 0.901476219 0.899526109 0.880478131 0.968958593 0.980095896 0.929019105 1 15.30294092 -4.82681903 0.383384418 0.987569173 0.479546218 0.910479891 0.028934992 1.58499768 0.189799266 0.025801883 0.373063471 1.49E-05 4.82681903 -0.508022956 SSSSSAS(ph)PSSPSSR ddPTM_A459_MK2206_30min_R2 1 SSSSSASPSSPSSR 14 0 E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 SSS(0.001)SS(0.006)AS(0.359)PS(0.359)S(0.271)PS(0.003)S(0.001)R 82.925 0.028844 1204000 0 482.49 901.92 1054.5 975.88 0 911.34 664.33 1084.8 939.41 TRUE FALSE 0 458.5302482 931.9895626 968.3439768 937.5620478 0 791.6799633 751.160212 1179.153943 908.7571286 0 0.50456853 1.025565064 1.065569607 1.031697049 0 0.871167816 0.826579719 1.297545742 1 9.827750966 -4.927695593 3.126861805 0.860813302 1.06E-19 0.419136031 0.325272016 0.301377511 5.289499149 0.087818698 0.538356698 1.18E-05 4.927695593 -0.860813302 SSSSSASPS(ph)SPSSR ddPTM_A459_MK2206_30min_R1 2 SSSSSASPSSPSSR 14 0 E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSSASPS(0.5)S(0.5)PSSR;SSSSS(0.005)AS(0.014)PS(0.49)S(0.49)PS(0.001)SR 271.04 2.16E-44 39970600 9167.75 10684.2 8148.23 7102.24 6442.79 6332.86 8798.71 8282.67 1570.97 6271.42 TRUE FALSE 8387.984721 9988.656638 7595.15085 7649.255755 6186.160031 6691.42106 8211.76411 8210.255489 1734.277953 7048.370856 1.190060071 1.417158212 1.077575372 1.085251601 0.877672324 0.94935712 1.165058462 1.164844424 0.246053732 1 12.78307412 -5.424143727 0.40726691 0.837596413 1.505887766 0.276672536 0.249530119 4.777750004 0.918035852 0.219941257 1.481663578 3.77E-06 5.424143727 0.668291354 SSSSSASPS(ph)SPSSR ddPTM_A459_MK2206_30min_R2 1 SSSSSASPSSPSSR 14 0 E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSS(0.001)AS(0.006)PS(0.553)S(0.438)PS(0.001)SR 86.467 0.023293 652400 2274.4 2445.4 1096.9 999.25 906.59 1080 504.11 1020.7 1070 622.25 TRUE FALSE 2448.529813 2323.964992 1133.470099 917.6080786 870.9927214 1121.100157 437.9197515 1154.108995 1163.066666 601.9460335 4.06768992 3.860753062 1.883009498 1.524402567 1.446961477 1.86245958 0.727506665 1.917296453 1.932177639 1 9.23349034 -5.284859326 3.191312038 1.514387426 4.071572275 0.876335705 0.367616604 0.075419753 1.566430843 0.097783596 0.268806936 5.19E-06 5.284859326 2.55718485 SSSSSASPS(ph)SPSSREEK ddPTM_A459_MK2206_30min_R1 1 SSSSSASPSSPSSREEK 17 1 E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSSAS(0.001)PS(0.86)S(0.137)PS(0.001)SREEK 302.9 1.10E-88 5386800 2359.9 2535.1 2429.9 3543.4 3492.5 2286.4 1261 3044.6 700.9 127.92 TRUE FALSE 2159.178113 2370.064529 2264.965158 3816.313282 3353.38633 2415.853992 1176.880991 3017.981383 773.7610632 143.7676953 15.01852073 16.4853761 15.75434003 26.54499867 23.32503363 16.80387229 8.185990517 20.99206902 5.38202314 1 7.167595728 -8.426061671 0.841702601 0.704957707 18.90929732 0.566227533 5.013425178 0.482824779 0.764349121 5.023458734 1.83305625 3.75E-09 8.426061671 18.20433961 SSSSSASPSS(ph)PSSR ddPTM_A459_MK2206_30min_R1 3 SSSSSASPSSPSSR 14 0 E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSSASPS(0.002)S(0.951)PS(0.047)SR;SSSSSAS(0.003)PS(0.18)S(0.806)PS(0.009)SR;SSS(0.001)S(0.012)S(0.052)AS(0.075)PS(0.107)S(0.75)PS(0.004)SR 228.17 3.52E-13 141929000 3855.65 4012.34 2880.38 2496.91 2669 2233.09 3695.33 2982.8 483.8 2339.24 TRUE FALSE 3527.706721 3751.135937 2684.867831 2689.222441 2562.688078 2359.525626 3448.821278 2956.721694 534.0927413 2629.042712 1.341821761 1.426806769 1.02123401 1.022890358 0.974760915 0.897484706 1.311816374 1.124638136 0.203151032 1 11.36032186 -1.522879193 0.291561369 0.845018273 5.648632571 0.293904703 0.272069097 72.11474446 1.024165769 0.291404507 178.9187991 0.029999969 1.522879193 4.803614298 SSSSSASPSS(ph)PSSR ddPTM_A459_MK2206_30min_R2 6 SSSSSASPSSPSSR 14 0 E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSSASPS(0.009)S(0.98)PS(0.01)SR;SSSSSASPS(0.009)S(0.979)PS(0.011)SR;S(0.001)S(0.001)S(0.005)S(0.005)S(0.003)AS(0.002)PS(0.115)S(0.807)PS(0.052)S(0.008)R;SSSSS(0.002)AS(0.05)PS(0.298)S(0.648)PS(0.001)SR;SSSSS(0.001)AS(0.004)PS(0.046)S(0.815)PS(0.116)S(0.018)R;SSSSS(0.001)AS(0.002)PS(0.004)S(0.941)PS(0.046)S(0.006)R 184 7.77E-05 653054310 996672.1 1204973.4 1011220.5 1231344 1186238.6 1204253.37 1409813.2 1089940.21 1117335.01 1181661.53 TRUE FALSE 1072978.082 1145136.173 1044934.087 1130739.256 1139660.912 1250082.076 1224703.033 1232399.138 1214518.789 1143104.011 0.938653064 1.001777758 0.914119867 0.989183176 0.996987939 1.093585591 1.071383725 1.078116362 1.062474436 1 20.12452525 -6.513401781 2.596561801 1.066404853 0.960094144 0.669468281 0.03302025 0.154525544 2.094818915 0.010920593 0.011754897 3.07E-07 6.513401781 -0.106310709 SSSSSASPSS(ph)PSSREEK ddPTM_A459_MK2206_30min_R1 2 SSSSSASPSSPSSREEK 17 1 E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSSASPS(0.367)S(0.535)PS(0.08)S(0.018)REEK;SSSSSASPS(0.015)S(0.328)PS(0.328)S(0.328)REEK 166.21 7.17E-06 28591500 4919.8 5171.2 6062.1 8094.9 8139.5 5205.17 3807.15 7023 1363.75 541.97 TRUE FALSE 4501.345175 4834.55394 5650.621542 8718.370601 7815.286479 5499.882227 3553.18197 6961.598651 1505.516693 609.1133353 7.389996105 7.93703513 9.276798282 14.31321578 12.83059494 9.029324936 5.83336756 11.42906952 2.47165282 1 9.250566879 -8.336851102 5.032846267 1.246531657 9.775273583 0.636937247 2.425535581 0.154442027 6.881217034 2.529061826 0.66758875 4.60E-09 8.336851102 8.528741926 SSSSSASPSSPS(ph)SR ddPTM_A459_MK2206_30min_R2 1 SSSSSASPSSPSSR 14 0 E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSSAS(0.002)PS(0.039)S(0.285)PS(0.662)S(0.012)R 123.95 0.0015538 2816900 0 1046.6 2297.1 1222 2395.3 811.8 2350 2139.2 2580.6 2142.4 TRUE FALSE 0 994.6273659 2373.684168 1122.158691 2301.248487 842.6936179 2041.442177 2418.800785 2805.055923 2072.493663 0 0.47991817 1.145327587 0.541453376 1.110376609 0.406608538 0.985017331 1.16709683 1.353468999 1 11.01715198 -4.969573829 2.998409621 0.940220741 9.95E-31 0.554250253 0.274578063 0.220837084 3.688298924 0.07290784 0.405383891 1.07E-05 4.969573829 -0.940220741 SSSSSASPSSPSS(ph)R ddPTM_A459_MK2206_30min_R2 1 SSSSSASPSSPSSR 14 0 E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSS(0.005)AS(0.012)PS(0.05)S(0.217)PS(0.036)S(0.68)R 95.195 0.012668 3210800 778.66 1117.6 853.62 1200.5 2337.1 1982.1 2312.2 1021.9 864.65 1945.6 TRUE FALSE 838.2748083 1062.101609 882.0792648 1102.41531 2245.333711 2057.530204 2008.605363 1155.465839 939.8556941 1882.115231 0.445389737 0.564312743 0.468663794 0.585732102 1.192984188 1.093200974 1.067206369 0.613918755 0.499361399 1 10.87813924 -6.077349969 7.700908022 0.90833035 0.504181114 0.480662418 0.202781723 0.291940746 26.08094813 0.066918963 0.08683163 8.37E-07 6.077349969 -0.404149236 SSSSSGDPSSDPLGS(ph)PTLLAL ddPTM_A459_MK2206_30min_R1 1 SSSSSGDPSSDPLGSPTLLAL 21 0 E9PPX2;P15407;P15407-2 E9PPX2 FOSL1 Fos-related antigen 1 1 SSSSSGDPSSDPLGS(0.5)PT(0.5)LLAL 100.38 0.00027348 5070700 3350.2 3556.9 3443.8 3470.9 2931.2 3001.6 2770.9 3022.3 1853.5 1973.8 TRUE FALSE 3065.247897 3325.345164 3210.044451 3738.229319 2814.444097 3171.547998 2586.058317 2995.87635 2046.177958 2218.329245 1.381782215 1.499031386 1.447055011 1.685155315 1.268722442 1.429701206 1.165768482 1.350510235 0.922395971 1 11.11525779 -7.725135526 0.758111457 0.971093711 1.4864647 0.671691802 0.126182627 0.376924653 0.411283677 0.110232112 0.05237066 1.88E-08 7.725135526 0.515370989 SSSSSGDPSSDPLGSPT(ph)LLAL ddPTM_A459_MK2206_30min_R1 1 SSSSSGDPSSDPLGSPTLLAL 21 0 E9PPX2;P15407;P15407-2 E9PPX2 FOSL1 Fos-related antigen 1 1 SSSSSGDPSSDPLGS(0.193)PT(0.807)LLAL 119.74 0.00017389 4316300 3108 3263.5 3381.6 3610.9 3253.5 2588.8 2246.7 2575 2129.3 1614.9 TRUE FALSE 2843.648279 3051.045557 3152.066414 3889.012144 3123.906206 2735.375619 2096.826742 2552.487046 2350.648355 1814.966004 1.56677771 1.681048323 1.73670824 2.14274655 1.721192683 1.507122234 1.155298082 1.406355293 1.295147319 1 10.82572681 -6.949376852 2.767029719 1.249523949 1.785629772 0.69907382 0.170886512 0.168005288 2.612510534 0.07099305 0.059001171 1.12E-07 6.949376852 0.536105823 SSSSSGDPSSDPLGSPT(ph)LLAL ddPTM_A459_MK2206_30min_R2 1 SSSSSGDPSSDPLGSPTLLAL 21 0 E9PPX2;P15407;P15407-2 E9PPX2 FOSL1 Fos-related antigen 1 1 SSSSSGDPSSDPLGS(0.417)PT(0.583)LLAL 107.09 0.00031414 2316000 7749.8 8008.5 6727.8 8597 10516 9127.1 9313.6 5783.9 8200.5 6147 TRUE FALSE 8343.130647 7610.809535 6952.101494 7894.5976 10103.089 9474.438186 8090.713132 6539.875589 8913.764667 5946.423893 1.403050101 1.279896905 1.169123093 1.327621061 1.699019307 1.593300168 1.360601477 1.099799763 1.499012655 1 12.53780659 -10.09085211 0.653167096 0.955962104 1.384236635 0.299212437 0.173369422 20.73196993 6.475636306 2.34853074 0.072624313 8.11E-11 10.09085211 0.428274531 SSSSSGVPYS(ph)PAIPNK ddPTM_A459_MK2206_30min_R1 4 SSSSSGVPYSPAIPNK 16 0 A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-4;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5 A0A0A0MRE1 EXOC7 Exocyst complex component 7 1 SSSSSGVPYS(1)PAIPNK;SSSSS(0.001)GVPYS(0.999)PAIPNK;SSSSSGVPYS(0.999)PAIPNK;SSSSSGVPYS(1)PAIPNK 216.01 1.46E-10 187396000 33940.9 32284.2 31067.6 27121 33592.2 30359.7 35172.7 32136.3 28438.6 29003.3 TRUE FALSE 31054.04822 30182.49271 28958.81787 29209.86412 32254.15154 32078.63998 32826.39336 31855.33572 31394.89424 32596.44777 0.952681975 0.925944229 0.888404101 0.896105745 0.989498972 0.984114595 1.007054314 0.977264024 0.963138513 1 14.99242713 -6.269061401 24.96450786 0.986582212 0.914554034 0.75844233 0.019641313 294.1572062 963455.9023 0.0065038 0.0075087 5.38E-07 6.269061401 -0.072028179 SSSSSGVPYS(ph)PAIPNK ddPTM_A459_MK2206_30min_R2 6 SSSSSGVPYSPAIPNK 16 0 A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-4;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5 A0A0A0MRE1 EXOC7 Exocyst complex component 7 1 SSSSS(0.001)GVPYS(0.999)PAIPNK;SSSSS(0.003)GVPY(0.119)S(0.878)PAIPNK;SSSSSGVPY(0.001)S(0.999)PAIPNK;SSSSSGVPYS(1)PAIPNK;SSSSSGVPYS(1)PAIPNK;SSSSSGVPYS(1)PAIPNK 217.79 1.21E-10 297200400 1604162 1916537 1746865 1961566 1891348 1814865 1840081 1517061 1698674 1931828 TRUE FALSE 1726977.876 1821364.559 1805104.607 1801299.783 1817084.174 1883930.959 1598476.154 1715346.082 1846421.594 1868792.611 0.924114247 0.97462102 0.96592024 0.96388426 0.972330565 1.008100604 0.855352352 0.917890017 0.98802916 1 20.83367504 SSSSSGVPYS(ph)PAIPNKR ddPTM_A459_MK2206_30min_R1 2 SSSSSGVPYSPAIPNKR 17 1 A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-4;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5 A0A0A0MRE1 EXOC7 Exocyst complex component 7 1 SSSS(0.013)S(0.004)GVPYS(0.983)PAIPNKR;SSSS(0.001)S(0.001)GVPYS(0.998)PAIPNKR 252.1 1.94E-30 47999000 11360.6 10589.2 10013.7 9018.4 11895.3 10602.4 11634.4 11092.5 10069 9841.3 TRUE FALSE 10394.32131 9899.841155 9333.997944 9712.998731 11421.48501 11202.69873 10858.2904 10995.51944 11115.70858 11060.51454 0.939768333 0.895061538 0.843902687 0.878168795 1.032635956 1.012855115 0.981716571 0.994123682 1.004990187 1 13.43313088 -6.255128124 24.99782009 1.003382996 0.886404871 0.834355913 0.025122741 208.6427638 826398.4172 0.008042439 0.010135579 5.56E-07 6.255128124 -0.116978125 SSSSSGVPYS(ph)PAIPNKR ddPTM_A459_MK2206_30min_R2 4 SSSSSGVPYSPAIPNKR 17 1 A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-4;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5 A0A0A0MRE1 EXOC7 Exocyst complex component 7 1 SSSSS(0.001)GVPYS(0.999)PAIPNKR;SSSSSGVPYS(1)PAIPNKR;SSSSSGVPYS(1)PAIPNKR;SSSSSGVPYS(1)PAIPNKR 122.83 0.00070506 163995000 409708 466818 448983 502063 466591 457991 507464 372935 437932 503528 TRUE FALSE 441075.5595 443636.4969 463951.8691 461042.8469 448270.2929 475420.1684 440833.3672 421678.885 476022.5338 487097.9226 0.905517226 0.910774767 0.952481724 0.946509573 0.920287836 0.976025859 0.905020011 0.865696332 0.9772625 1 18.8938523 -7.292710858 0.006529458 1.871258767 1.98E-06 0.20733832 0.035048921 8322.413037 33.48855084 4750.478352 4844.045535 5.10E-08 7.292710858 -1.871256791 SSSSSPTSPGS(ph)FR ddPTM_A459_MK2206_30min_R2 1 SSSSSPTSPGSFR 13 0 G5E9L9;Q8N568-2;Q8N568;A0A0U1RR70;Q8N568-3 G5E9L9 DCLK2 Serine/threonine-protein kinase DCLK2 1 SSSSSPTSPGS(1)FR 142.39 0.00077791 6957200 12829 15532 11188 12367 16802 13128 12553 13796 9689.8 17824 TRUE FALSE 13811.1981 14760.70347 11561.00234 11356.57654 16142.26906 13627.59524 10904.77602 15599.18457 10532.60129 17242.40434 0.801001869 0.856069906 0.670498273 0.658642282 0.936195947 0.790353536 0.63243941 0.904698919 0.610854558 1 14.07367334 -10.69054244 5.252022232 1.000009965 0.765622423 0.296061917 0.109848004 1.24E-05 1.97E-06 0.102960207 0.024970457 2.04E-11 10.69054244 -0.234387542 SSSSSSQPEHSAMLVS(ph)TAASPSLIK ddPTM_A459_MK2206_30min_R1 1 SSSSSSQPEHSAMLVSTAASPSLIK 25 0 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 SSSSSSQPEHSAMLVS(0.361)T(0.361)AAS(0.215)PS(0.064)LIK 87.439 5.15E-05 7003100 1814.3 1317.6 1511.7 1158.2 1733.4 1690 1790.4 1422.2 1309 1019.3 TRUE FALSE 1659.984258 1231.824001 1409.090016 1247.404765 1664.355007 1785.68634 1670.965683 1409.765855 1445.075234 1145.578579 1.449035699 1.075285469 1.230024759 1.088886251 1.45285102 1.55876373 1.45862162 1.230614714 1.261437024 1 10.16186071 -2.709834876 15.86588497 1.291989123 43.38262189 0 0.182067017 0 0 0.043065115 0 0.001950586 2.709834876 42.09063277 SSSSSSQPEHSAMLVS(ph)TAASPSLIK ddPTM_A459_MK2206_30min_R2 1 SSSSSSQPEHSAMLVSTAASPSLIK 25 0 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 SSSSSSQPEHSAMLVS(0.329)T(0.256)AAS(0.304)PS(0.111)LIK 71.117 0.00065357 5829000 27357 46544 35185 58972 53828 52759 49511 38045 36693 35203 TRUE FALSE 29451.47295 44232.69264 36358.05034 54153.79896 51714.44226 54766.78071 43010.14623 43017.61213 39884.49081 34054.32899 0.864837858 1.298886043 1.067648414 1.590217766 1.518586441 1.608217878 1.262986161 1.263205396 1.171201782 1 15.05555059 -3.630639499 12.58008592 1.292975314 1.236451168 0 0.239831 0 0 0.056397749 0 0.000234078 3.630639499 -0.056524146 SSSSSSQPEHSAMLVST(ph)AASPSLIK ddPTM_A459_MK2206_30min_R2 5 SSSSSSQPEHSAMLVSTAASPSLIK 25 0 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 SSSSSSQPEHSAMLVS(0.149)T(0.469)AAS(0.241)PS(0.141)LIK;SSSSSSQPEHSAMLVS(0.034)T(0.513)AAS(0.352)PS(0.099)LIK;SSSSSSQPEHSAMLVS(0.045)T(0.54)AAS(0.311)PS(0.103)LIK;SSSSSSQPEHSAMLVS(0.018)T(0.683)AAS(0.221)PS(0.078)LIK;SSSSSSQPEHS(0.018)AMLVS(0.059)T(0.779)AAS(0.102)PS(0.042)LIK 130.75 9.53E-08 97305000 156892 307234 201965 368966 334991 335560 352075 213217 246861 228737 TRUE FALSE 168903.7721 291977.2063 208698.4123 338820.2975 321837.5701 348329.9709 305847.1296 241085.194 268332.5236 221273.3304 0.763326388 1.319531847 0.943170204 1.53122971 1.454479713 1.574206753 1.382214156 1.089535705 1.212674492 1 17.75547005 -5.750611392 24.99947003 1.343060756 1.039761681 0.298217712 0.215816433 282.3859668 651961.6809 0.05962156 0.101970507 1.78E-06 5.750611392 -0.303299075 SSSSSSQPEHSAMLVSTAAS(ph)PSLIK ddPTM_A459_MK2206_30min_R1 3 SSSSSSQPEHSAMLVSTAASPSLIK 25 0 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 SSSSSSQPEHSAMLVS(0.007)T(0.019)AAS(0.737)PS(0.236)LIK;SSSSSSQPEHSAMLVS(0.041)T(0.1)AAS(0.613)PS(0.246)LIK;S(0.001)S(0.001)S(0.001)S(0.001)S(0.001)S(0.005)QPEHS(0.132)AMLVS(0.067)T(0.256)AAS(0.382)PS(0.154)LIK 115.35 5.16E-08 63626500 13432.1 6475.96 7473.36 5553.79 12301.4 11798.8 11180 9574.5 5885.54 5161.79 TRUE FALSE 12289.62936 6054.373827 6966.089145 5981.543868 11811.40919 12466.83786 10434.2026 9490.791156 6497.362945 5801.271515 2.118437196 1.043628765 1.200786608 1.031074628 2.036003514 2.148983689 1.798606146 1.635984651 1.119989459 1 12.50215343 -6.255730005 24.95807444 1.690113841 1.316156946 0.071227689 0.442572963 976.5340592 4268838.504 0.133820961 0.167970054 5.55E-07 6.255730005 -0.373956895 SSSSSSQPEHSAMLVSTAAS(ph)PSLIK ddPTM_A459_MK2206_30min_R2 2 SSSSSSQPEHSAMLVSTAASPSLIK 25 0 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 1 SSSSSSQPEHS(0.003)AMLVS(0.068)T(0.263)AAS(0.465)PS(0.201)LIK;SSSSSSQPEHSAMLVS(0.001)T(0.024)AAS(0.711)PS(0.264)LIK 126.93 4.65E-08 46536600 127339 214554 142024 253841 242684 240301 237463 155400 180641 154182 TRUE FALSE 137088.1717 203899.5604 146759.0093 233101.3783 233155.0068 249445.8229 206283.8229 175711.3136 196352.8277 149151.054 0.919123051 1.367067513 0.983962268 1.562854382 1.56321394 1.672437548 1.383053068 1.178076245 1.316469595 1 17.18641465 -5.759090592 24.99997628 1.409378965 1.117752599 0.269360354 0.215951075 84.19927194 896174.2051 0.060544592 0.098817997 1.74E-06 5.759090592 -0.291626366 SSSSSSSSGSPS(ph)PSRR ddPTM_A459_MK2206_30min_R2 1 SSSSSSSSGSPSPSRR 16 1 H3BMS0;Q15287-3;Q15287-2;H3BUG0;H3BTY0;H3BUL0;H3BMM9;H3BTC0;Q15287 H3BMS0 RNPS1 RNA-binding protein with serine-rich domain 1 1 SSSSSSSSGS(0.028)PS(0.771)PS(0.201)RR 83.393 0.037207 0 0 0 808.82 806.65 2084.8 701.98 535.69 587.38 0 0 TRUE FALSE 0 0 835.7856551 740.7441147 2002.940277 728.6943408 465.3532595 664.1525828 0 0 0 SSSSTPTS(ph)PKPLLQSPK ddPTM_A459_MK2206_30min_R2 1 SSSSTPTSPKPLLQSPK 17 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.055)S(0.055)S(0.055)S(0.059)T(0.059)PT(0.21)S(0.506)PKPLLQSPK 55.337 0.043377 14305000 102500 81325 91954 94193 62776 44401 85077 58756 45180 100080 TRUE FALSE 110347.4788 77286.51876 95019.70047 86497.13059 60311.09882 46090.71117 73906.2877 66435.61094 49109.67473 96814.3978 1.139783765 0.798295713 0.981462496 0.893432512 0.622955885 0.4760729 0.763381164 0.686216229 0.507255903 1 16.56293399 -6.172401588 4.302963439 0.65477399 0.952260595 0.427142426 0.157250294 0.211002227 6.987604651 0.04531708 0.059184477 6.72E-07 6.172401588 0.297486605 SSSSTPTSPKPLLQS(ph)PKPSLAAR ddPTM_A459_MK2206_30min_R2 1 SSSSTPTSPKPLLQSPKPSLAAR 23 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SSS(0.001)S(0.006)T(0.005)PT(0.041)S(0.041)PKPLLQS(0.879)PKPS(0.027)LAAR 50.237 0.017892 7523800 38827 29287 23248 20881 27339 18828 38221 24766 22881 33872 TRUE FALSE 41799.62497 27832.65017 24023.07672 19174.9555 26265.53349 19544.51273 33202.53679 28003.00123 24871.14802 32766.75941 1.275671617 0.849417235 0.733153877 0.585195358 0.801590818 0.596473777 1.013299374 0.854616133 0.75903594 1 14.99994538 -4.765385216 3.750453053 0.781717903 1.336160692 0.529792584 0.135236326 0.212772331 5.200928242 0.034259594 0.337071589 1.72E-05 4.765385216 0.554442789 SSSSVGS(ph)PTR ddPTM_A459_MK2206_30min_R1 3 SSSSVGSPTR 10 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 SSS(0.008)S(0.001)VGS(0.966)PT(0.024)R;SSSSVGS(0.999)PT(0.001)R;SSSSVGS(1)PTR 179.94 0.00011593 21953000 13824.6 12219.5 9698.1 9235.6 8674.2 7663.3 13112.1 12699.8 1870.8 8455.5 TRUE FALSE 12648.74517 11424.00833 9039.819992 9946.927512 8328.688246 8097.189424 12237.41573 12588.76699 2065.276355 9503.031176 1.33102217 1.202143623 0.951256481 1.046711026 0.876424384 0.85206386 1.287738144 1.32471069 0.217328168 1 13.21417205 -5.085503879 2.38991507 0.964009493 1.337425957 0.171024919 0.286788101 0.651991609 6.555336087 0.076234767 0.380436747 8.21E-06 5.085503879 0.373416464 SSSSVGS(ph)PTR ddPTM_A459_MK2206_30min_R2 3 SSSSVGSPTR 10 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 SSSS(0.008)VGS(0.98)PT(0.011)R;SSSSVGS(0.787)PT(0.213)R;SSSSVGS(0.999)PT(0.001)R 111.27 0.008954 184531000 51738 68529 57390 72263 59217 63053 60815 55601 68893 59215 TRUE FALSE 55699.10106 65125.94951 59303.35396 66358.88174 56891.84304 65452.5261 52829.91745 62868.24161 74885.18861 57282.8194 0.972352647 1.136919415 1.035272959 1.15844301 0.993174631 1.142620541 0.922264616 1.097506063 1.307288807 1 15.80581488 -8.009699124 24.95751896 1.169895424 1.056048026 0.136285082 0.100771373 714.8925688 1839533.054 0.055234869 0.024084804 9.78E-09 8.009699124 -0.113847399 SSSSVSSQGSVASSTGS(ph)PASIR ddPTM_A459_MK2206_30min_R2 1 SSSSVSSQGSVASSTGSPASIR 22 0 A0A087WXK8;Q9H4H8-2;Q9H4H8 A0A087WXK8 FAM83D Protein FAM83D 1 SSSSVSSQGSVASS(0.002)T(0.194)GS(0.804)PASIR 241.79 7.60E-72 0 12474 13666 10123 12564 13173 12931 12731 10283 11586 11872 TRUE FALSE 13429.01903 12987.36631 10460.49577 11537.48101 12655.76183 13423.09827 11059.40441 11627.02341 12593.72934 11484.61761 1.169304846 1.130848823 0.910826648 1.004602974 1.101975029 1.168789308 0.962975415 1.012399698 1.096573675 1 13.4874152 -7.060217796 0.009589151 4.41E-07 2.103029937 0.078899177 0.081622437 6971.50773 33.20845112 3568.723515 3710.296992 8.71E-08 7.060217796 2.103029497 SSSTGSSSSTGGGGQESQPS(ph)PLALLAATCSR ddPTM_A459_MK2206_30min_R1 2 SSSTGSSSSTGGGGQESQPSPLALLAATCSR 31 0 P08047;H3BVI2;P08047-2 P08047 SP1 Transcription factor Sp1 1 SSSTGSSSSTGGGGQES(0.006)QPS(0.994)PLALLAATCSR;SSSTGSSSSTGGGGQES(0.02)QPS(0.98)PLALLAATCSR 156.9 3.96E-23 19307600 1172.35 1229.68 1159.55 1158.52 1524.19 1408.09 1396.8 1147.23 1237.71 1015.76 TRUE FALSE 1072.635476 1149.627608 1080.842977 1247.749411 1463.478285 1487.814839 1303.622021 1137.199889 1366.374384 1141.600017 0.939589576 1.007031877 0.946779047 1.092982999 1.281953629 1.303271563 1.141925369 0.996145648 1.196894151 1 10.15684155 -5.911758269 4.472868676 1.162287342 0.970126138 0.430523093 0.096459611 0.210360128 7.625502641 0.029436708 0.044671526 1.23E-06 5.911758269 -0.192161204 SSSTGSSSSTGGGGQESQPS(ph)PLALLAATCSR ddPTM_A459_MK2206_30min_R2 3 SSSTGSSSSTGGGGQESQPSPLALLAATCSR 31 0 P08047;H3BVI2;P08047-2 P08047 SP1 Transcription factor Sp1 1 SSSTGSSSSTGGGGQES(0.001)QPS(0.998)PLALLAATCSR;SSSTGSSSSTGGGGQES(0.028)QPS(0.972)PLALLAATCSR;SSSTGSSSSTGGGGQES(0.346)QPS(0.654)PLALLAATCSR 130.95 2.76E-18 19424700 12432 18139.7 19087.3 24659.7 24735.9 17065.9 26549.4 10850.6 16065.3 21153.2 TRUE FALSE 13383.80348 17238.90888 19723.66106 22644.92363 23764.64428 17715.35478 23063.43189 12268.81068 17462.63075 20462.97282 0.65404981 0.84244401 0.963870755 1.106629219 1.161348573 0.865727328 1.127081197 0.5995615 0.85337702 1 14.32072813 -10.69099847 12.85328559 1.000017021 0.917321495 0.020649718 0.180053737 0 0 0.182968478 0.044376374 2.04E-11 10.69099847 -0.082695527 SSSTLPVPQPSS(ph)APPTPTR ddPTM_A459_MK2206_30min_R2 1 SSSTLPVPQPSSAPPTPTR 19 0 Q08999 Q08999 RBL2 Retinoblastoma-like protein 2 1 SSSTLPVPQPS(0.228)S(0.772)APPTPTR 239.8 7.06E-66 0 7390.9 10569 7998.2 9483 7981 7521.2 9941.3 7650 7151.9 8310.5 TRUE FALSE 7956.752987 10044.15883 8264.855996 8708.208565 7667.625839 7807.424536 8635.995368 8649.881266 7773.959334 8039.329066 0.989728486 1.249377746 1.028052954 1.083200911 0.953764397 0.971153746 1.07421842 1.075945666 0.96699106 1 12.97285939 -5.475855487 24.99138687 1.021621409 1.124343753 0.229790475 0.073394751 532.7854966 283157.5825 0.018400964 0.038302975 3.34E-06 5.475855487 0.102722344 SSSVGSSSSYPIS(ph)PAVSR ddPTM_A459_MK2206_30min_R1 4 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 SSSVGSSSSYPIS(1)PAVSR;SSSVGSSSSYPIS(1)PAVSR;SSSVGSSSSYPIS(1)PAVSR;SSSVGSSS(0.045)S(0.014)YPIS(0.941)PAVSR 333.03 2.13E-144 391896000 14078.1 11561.7 12623.1 10578 11987 8968.3 8676.63 6732.1 5772.15 4992.02 TRUE FALSE 12880.68367 10809.03123 11766.27914 11392.71939 11509.53241 9476.077396 8097.827844 6673.241959 6372.185648 5610.469125 2.29583006 1.926582428 2.097200587 2.030617964 2.051438507 1.688999116 1.443342377 1.189426732 1.135766993 1 12.45390569 -7.290158196 1.019043252 1.041041999 2.103176947 0.956105621 0.092041243 0.098170195 0.196929363 0.064900935 0.036086744 5.13E-08 7.290158196 1.062134948 up SSSVGSSSSYPIS(ph)PAVSR ddPTM_A459_MK2206_30min_R2 5 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 SSSVGSSSSYPIS(1)PAVSR;SSSVGSSSSYPIS(1)PAVSR;SSSVGSSSSYPIS(1)PAVSR;SSSVGSSSSYPIS(1)PAVSR;SSSVGSSS(0.001)SYPIS(0.999)PAVSR 343.31 2.58E-163 424310000 106090.7 116413.6 107252 121789.8 111220.5 83548.5 71842.3 47415.6 58291.9 60187.1 TRUE FALSE 114213.0856 110632.6699 110827.7281 111839.1838 106853.4243 86727.99671 62409.31971 53612.98172 63362.02409 58223.19986 1.961642195 1.900147539 1.90349772 1.920869757 1.835237922 1.489577985 1.071897798 0.920818194 1.088260766 1 15.82930651 -7.027511067 1.858359829 0.992205699 1.919502427 0.988991853 0.044054703 0.032177294 0.222614959 0.020608178 0.015490738 9.39E-08 7.027511067 0.927296728 SSSVLS(ph)LEGSEK ddPTM_A459_MK2206_30min_R1 2 SSSVLSLEGSEK 12 0 A1L390-3;A1L390;G3V311;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 SS(0.003)S(0.041)VLS(0.956)LEGSEK;SSSVLS(0.993)LEGS(0.007)EK 223.36 1.56E-08 59925000 4519.3 4406.9 4781.6 3674.2 3989.9 3748.8 4161.1 4202.1 4014.2 3656.4 TRUE FALSE 4134.909803 4120.010009 4457.038314 3957.187521 3830.973834 3961.053816 3883.520611 4165.361483 4431.490455 4109.382436 1.006211972 1.002586173 1.084600517 0.962964042 0.932250501 0.963904888 0.945037526 1.013622253 1.078383558 1 12.00470588 -14.26969949 13.88300711 1.001166245 0.996490526 0 0.048854228 0 0 0 0.011975235 5.37E-15 14.26969949 -0.004675719 SSSVLS(ph)LEGSEK ddPTM_A459_MK2206_30min_R2 2 SSSVLSLEGSEK 12 0 A1L390-3;A1L390;G3V311;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 SS(0.001)S(0.123)VLS(0.875)LEGSEK;SSSVLS(1)LEGSEK 145.61 0.00067846 51540000 100897 102585 108803 107570 111211 101858 124276 91155 101935 125154 TRUE FALSE 108621.7519 97490.77807 112430.4377 98781.1869 106844.2973 105734.2776 107958.4119 103069.2715 110801.122 121070.2352 0.897179655 0.805241502 0.928638137 0.815899851 0.88249847 0.873330075 0.891700687 0.851318008 0.91518053 1 16.8854847 -8.598563862 3.220915497 0.999929456 0.868004785 0.570020439 0.035088811 0.219944646 5.694847679 0.030837686 0.008171875 2.52E-09 8.598563862 -0.131924672 SSSVS(ph)PSASFR ddPTM_A459_MK2206_30min_R2 4 SSSVSPSASFR 11 0 Q04727-4;Q04727;Q04727-3;H7C4W5;H7C4P7;Q5JSY7;Q04727-2 Q04727-4 TLE4 Transducin-like enhancer protein 4 1 SS(0.001)S(0.022)VS(0.976)PS(0.001)ASFR;S(0.001)S(0.01)S(0.177)VS(0.803)PS(0.009)ASFR;SSS(0.014)VS(0.982)PS(0.005)ASFR;SS(0.002)S(0.011)VS(0.984)PS(0.003)ASFR 147.58 0.00066406 134420000 525390 570425 491662 630053 624595 611285 689777 499549 500395 631489 TRUE FALSE 565614.2624 542098.524 508053.7657 578575.6545 600070.262 634547.879 599208.4513 564841.7695 543918.4526 610883.5656 0.925895366 0.887400733 0.831670378 0.947112817 0.982298912 1.038737846 0.980888151 0.924630816 0.890379907 1 19.2205379 -5.934366673 7.105005147 0.969329885 0.882583269 0.45133137 0.043350868 0.220115852 19.59671687 0.013382814 0.019928199 1.16E-06 5.934366673 -0.086746615 SSSVS(ph)PSSWK ddPTM_A459_MK2206_30min_R1 1 SSSVSPSSWK 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 SSS(0.01)VS(0.447)PS(0.135)S(0.407)WK 91.313 0.028206 10184000 2146 2111.9 1860.8 2004.9 1622.1 1593.1 2366.6 1557.2 2354.3 2413.8 TRUE FALSE 1963.471431 1974.414926 1734.49408 2159.317745 1557.488322 1683.299945 2208.728432 1543.585565 2599.03791 2712.839767 0.723769776 0.727803739 0.639364736 0.79596214 0.574117329 0.620493685 0.814175779 0.568992531 0.958050653 1 11.40558812 -8.344483 6.389099965 0.990291132 0.685829546 0.683210427 0.080647467 0.139795724 8.654370977 0.073733895 0.019181292 4.52E-09 8.344483 -0.304461586 SSSVSPS(ph)SWK ddPTM_A459_MK2206_30min_R1 1 SSSVSPSSWK 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 S(0.061)S(0.042)S(0.002)VS(0.238)PS(0.631)S(0.026)WK 123.01 0.0042874 12050000 6833.3 6933.8 6969.5 5404.5 5433.3 5569.4 7556 6464.3 7853.2 9019.5 TRUE FALSE 6252.091952 6482.40836 6496.429758 5820.755526 5216.880156 5884.734615 7051.953027 6407.783307 8669.568243 10136.90375 0.616765445 0.639486032 0.640869235 0.574214343 0.514642368 0.580525845 0.695671301 0.632124312 0.855248156 1 13.30732944 -8.416412872 1.444445348 1.003487419 0.600969512 0.892072904 0.045402144 0.126819237 0.564476287 0.04661317 0.014035483 3.83E-09 8.416412872 -0.402517907 SSSVSPSSWKS(ph)PPAS(ph)PESWK ddPTM_A459_MK2206_30min_R2 1 SSSVSPSSWKSPPASPESWK 20 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 S(0.002)S(0.002)S(0.008)VS(0.053)PS(0.282)S(0.308)WKS(0.452)PPAS(0.856)PES(0.036)WK 64.257 0.036015 5517100 23251 45608 34538 30495 36728 28810 31934 26738 26143 27079 TRUE FALSE 25031.11444 43343.17304 35689.47968 28003.46095 35285.87418 29906.38474 27741.02744 30232.74841 28416.87088 26195.41445 0.955553289 1.654609173 1.362432335 1.069021489 1.347024848 1.141664882 1.059003189 1.154123691 1.084803256 1 14.67702667 -6.76360735 0.773416638 1.060949318 1.329289762 0.208138196 0.179587112 0.994173208 1.302539664 0.122634597 0.119011609 1.72E-07 6.76360735 0.268340445 SSSVT(ph)SIDKESR ddPTM_A459_MK2206_30min_R1 1 SSSVTSIDKESR 12 1 H0Y332;Q5JRH0;Q5T5C0-3;Q5T5C0-2;Q5T5C0 H0Y332 STXBP5 Syntaxin-binding protein 5 1 SSSVT(0.5)S(0.5)IDKESR 174.46 0.0014703 4895700 3265.5 3286.3 3591.1 3327.1 3419.5 3522.9 4015.2 4859.7 4604.8 4222.5 TRUE FALSE 2987.752077 3072.361273 3347.346137 3583.353818 3283.294074 3722.363554 3747.353334 4817.212155 5083.485438 4745.615178 0.629581617 0.647410537 0.705355578 0.755087314 0.691858474 0.784379562 0.789645429 1.015086975 1.071196304 1 12.2123794 -7.611466928 1.485223369 1.054976076 0.692691363 0.909371004 0.046086029 0.117065401 0.492381816 0.035237795 0.015483711 2.45E-08 7.611466928 -0.362284713 SSSVTS(ph)IDKESR ddPTM_A459_MK2206_30min_R2 1 SSSVTSIDKESR 12 1 H0Y332;Q5JRH0;Q5T5C0-3;Q5T5C0-2;Q5T5C0 H0Y332 STXBP5 Syntaxin-binding protein 5 1 SSS(0.003)VT(0.03)S(0.967)IDKESR 137.81 0.0061397 4916400 14817 18770 22038 20133 25660 20754 30179 19034 20744 27992 TRUE FALSE 15951.40091 17837.90909 22772.73592 18488.0695 24652.45947 21543.80801 26216.46105 21521.80915 22548.27562 27078.62333 0.589077248 0.65874505 0.840985734 0.682755149 0.910402983 0.795602042 0.968160779 0.794789635 0.832696528 1 14.72486677 -3.706661976 0.369427666 0.903499787 3.19E-24 0.619363686 0.078262177 9.221621283 0.539056135 0.063724911 4.334683631 0.000196489 3.706661976 -0.903499787 SSSYS(ph)EANEPDLQMANGGK ddPTM_A459_MK2206_30min_R1 1 SSSYSEANEPDLQMANGGK 19 0 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 S(0.086)S(0.086)S(0.086)Y(0.306)S(0.435)EANEPDLQMANGGK 95.183 0.0055374 0 529.99 482.83 503.48 493.37 535.57 465.73 384.08 372.54 238.09 308.16 TRUE FALSE 484.9115674 451.3976792 469.3051804 531.3694429 514.2371128 492.0992301 358.458724 369.2829221 262.8403075 346.3371873 1.400114066 1.303347419 1.355052814 1.534254658 1.484787461 1.420867433 1.034999235 1.066252587 0.758914483 1 8.436033492 -7.366497401 2.610650551 0.939097397 1.420407631 0.846091276 0.094740841 0.113672964 1.507633748 0.04870839 0.03011296 4.30E-08 7.366497401 0.481310234 SST(ph)DFSELEQPR ddPTM_A459_MK2206_30min_R1 2 SSTDFSELEQPR 12 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 SS(0.006)T(0.993)DFSELEQPR;S(0.001)S(0.001)T(0.997)DFSELEQPR 222.73 4.46E-08 58541000 4349.6 4625 4912.4 4853.7 5549.3 4513.8 5418.5 4579.3 4211 3224.3 TRUE FALSE 3979.643679 4323.911659 4578.959975 5227.532815 5328.25963 4769.367455 5057.041752 4539.263663 4648.748519 3623.750626 1.098211243 1.193214464 1.263596877 1.442575208 1.470371496 1.316141188 1.395526976 1.252642395 1.282855527 1 11.82326796 -9.07673232 1.372944592 1.000048974 1.313355391 0.417411838 0.107024334 3.280991214 7.083178757 0.11407388 0.033447353 8.38E-10 9.07673232 0.313306417 SST(ph)DFSELEQPR ddPTM_A459_MK2206_30min_R2 2 SSTDFSELEQPR 12 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 S(0.003)S(0.003)T(0.994)DFS(0.001)ELEQPR;SS(0.001)T(0.998)DFSELEQPR 237.41 8.44E-13 38896000 45923 76296 68550 56436 74280 81245 69831 51702 65012 53148 TRUE FALSE 49438.90019 72507.25158 70835.42279 51824.99827 71363.39397 84336.83541 60662.10582 58459.62892 70666.62625 51413.78511 0.961588416 1.410268694 1.377751563 1.007998111 1.388020622 1.640354532 1.179880176 1.13704192 1.374468464 1 15.64986761 -11.01171927 2.651430448 0.987586143 1.281571566 0.150477917 0.195694051 17107074.06 17152041.28 1548344.13 0.052091707 9.73E-12 11.01171927 0.293985423 SST(ph)GPEPPAPTPLLAER ddPTM_A459_MK2206_30min_R1 1 SSTGPEPPAPTPLLAER 17 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SS(0.007)T(0.993)GPEPPAPTPLLAER 113.52 0.0042304 2738100 410.28 472.85 522.99 549.22 501.23 528.01 408.06 416.89 482.95 338.31 TRUE FALSE 375.3835315 442.0673791 487.4908959 591.5210196 481.2649477 557.9054699 380.8390619 413.2451747 533.1543808 380.2223969 0.987273592 1.162654758 1.282120411 1.555723767 1.26574592 1.467313537 1.001621854 1.086851217 1.402217189 1 8.570699706 -7.271757943 24.98579328 1.129910179 1.292215495 0.167245697 0.178889294 1444.230295 3497103.48 0.077596791 0.052977077 5.35E-08 7.271757943 0.162305316 SST(ph)IYSNSAESFLPGICK ddPTM_A459_MK2206_30min_R2 1 SSTIYSNSAESFLPGICK 18 0 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 S(0.085)S(0.085)T(0.517)IYS(0.234)NS(0.074)AES(0.005)FLPGICK 94.922 0.016291 0 8188.5 6797.2 7807.4 7756.4 8733.4 9962 9679.3 6379 8053.2 8542.9 TRUE FALSE 8815.417856 6459.660932 8067.694819 7122.677309 8390.482834 10341.11089 8408.396283 7212.757202 8753.652779 8264.145873 1.066706468 0.781648949 0.976228511 0.861877007 1.015287359 1.251322405 1.017454969 0.872777092 1.059232607 1 13.01265 -6.396965213 6.383380773 1.041397038 0.91629118 0.205375235 0.110699364 0.388760231 18.58668538 0.035487719 0.0402159 4.01E-07 6.396965213 -0.125105858 SST(ph)PEEVK ddPTM_A459_MK2206_30min_R2 1 SSTPEEVK 8 0 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;E9PLJ3;E9PS23 P23528 CFL1 Cofilin-1 1 S(0.103)S(0.142)T(0.755)PEEVK 125.97 0.011588 49980000 729670 725330 748060 704460 702260 504800 751510 608150 585030 798570 TRUE FALSE 785534.0962 689311.1669 772999.947 646903.3645 674685.7438 524010.5177 652835.8343 687637.2931 635914.8519 772512.7263 1.016855865 0.89229749 1.000630696 0.837401563 0.873365216 0.678319593 0.845081009 0.890130699 0.823177186 1 19.55919917 -5.772229392 24.9969422 0.838721742 0.962164962 0.31050642 0.080758016 234.7906996 543933.5383 0.022274617 0.033411686 1.69E-06 5.772229392 0.123443221 SST(ph)PEMPAVSAFFSLAALAEVAAMENVHR ddPTM_A459_MK2206_30min_R1 1 SSTPEMPAVSAFFSLAALAEVAAMENVHR 29 0 C9JA69;Q8WY36-2;Q8WY36;H7C1Q0 C9JA69;H7C1Q0 BBX HMG box transcription factor BBX 1 S(0.137)S(0.137)T(0.725)PEMPAVS(0.001)AFFSLAALAEVAAMENVHR 110.55 2.14E-09 6871300 0 0 0 0 0 0 0 60.834 0 0 TRUE FALSE 0 0 0 0 0 0 0 60.30213475 0 0 0 SST(ph)PLPTISSSAENTR ddPTM_A459_MK2206_30min_R1 7 SSTPLPTISSSAENTR 16 0 P42166;G5E972;P42167;H0YJH7;P42167-2;P42167-3 P42166;G5E972 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 S(0.047)S(0.008)T(0.945)PLPTISSSAENTR;S(0.092)S(0.092)T(0.815)PLPTISSSAENTR;S(0.01)S(0.01)T(0.98)PLPTISSSAENTR;S(0.04)S(0.073)T(0.887)PLPTISSSAENTR;S(0.17)S(0.17)T(0.66)PLPTISSSAENTR;SS(0.006)T(0.994)PLPTISSSAENTR;S(0.008)S(0.008)T(0.964)PLPT(0.001)IS(0.002)S(0.008)S(0.008)AENT(0.001)R 246.77 7.58E-29 2242297000 17386.76 17284 16805.8 14121.38 17940.75 15916.88 17681.49 16415.98 16069.75 14096.75 TRUE FALSE 15907.92476 16158.80846 15665.06912 15209.01113 17226.13194 16818.07999 16501.99006 16272.45682 17740.25802 15843.16182 1.004087754 1.01992321 0.988759018 0.959973225 1.087291296 1.061535582 1.041584392 1.027096549 1.119742273 1 13.95157266 -6.264016569 24.99451676 1.057098339 0.994779418 0.458881614 0.033500971 212.8109362 2063905.889 0.010034357 0.011910775 5.44E-07 6.264016569 -0.062318922 SST(ph)PLPTISSSAENTR ddPTM_A459_MK2206_30min_R2 5 SSTPLPTISSSAENTR 16 0 P42166;G5E972;P42167;H0YJH7;P42167-2;P42167-3 P42166;G5E972 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 SS(0.001)T(0.998)PLPTISSSAENTR;S(0.081)S(0.081)T(0.837)PLPTISSSAENTR;S(0.008)S(0.008)T(0.979)PLPT(0.003)IS(0.003)S(0.001)SAENTR;S(0.004)S(0.004)T(0.992)PLPTISSSAENTR;S(0.001)S(0.005)T(0.994)PLPTISSSAENTR 229.23 7.88E-15 2706787000 597465 551897 543569 663907 512508 577355 692432 470231 479872 528200 TRUE FALSE 643207.3798 524490.5975 561691.3192 609663.6744 492384.3608 599326.6491 601514.8466 531691.8062 521610.3992 510964.8773 1.258809379 1.026470939 1.09927579 1.193161608 0.963636412 1.172931205 1.177213686 1.040564293 1.020834156 1 18.9628646 -7.937962911 0.016402577 3.32E-06 2.149666921 0.220526553 0.083178377 624.3904679 10.50474709 686.7618311 686.9619664 1.15E-08 7.937962911 2.149663606 SST(ph)PLSEAK ddPTM_A459_MK2206_30min_R1 1 SSTPLSEAK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SS(0.013)T(0.987)PLSEAK 133.23 0.0074217 4836600 3580.2 3200.8 3150.1 2659 2800.1 2258.7 2497.8 2844.6 2598.6 2382.2 TRUE FALSE 3275.68519 2992.427338 2936.279989 2863.796641 2688.566088 2386.585642 2331.176319 2819.729962 2868.733769 2677.324921 1.223491839 1.117693006 1.096721569 1.069648521 1.004198656 0.891406801 0.870711023 1.053189301 1.071492573 1 11.38657652 -5.584250073 1.063970064 0.974992843 1.200671734 0.5973351 0.063006225 0.524636473 1.040345967 0.025771759 0.099407742 2.60E-06 5.584250073 0.22567889 SST(ph)PPGESYFGVSSLQLK ddPTM_A459_MK2206_30min_R1 2 SSTPPGESYFGVSSLQLK 18 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.133)S(0.133)T(0.733)PPGESYFGVSSLQLK;S(0.025)S(0.025)T(0.95)PPGESYFGVSSLQLK 209.33 3.22E-11 1487370000 16890.5 16308.2 17768.6 15331.6 16899.6 14434.6 16630.9 17239.9 14439.7 14985.7 TRUE FALSE 15453.87428 15246.53322 16562.51694 16512.44249 16226.45315 15251.87458 15521.48301 17089.17337 15940.75849 16842.24165 0.917566355 0.905255579 0.98339148 0.980418333 0.963437854 0.90557272 0.92158059 1.014661452 0.946474871 1 14.03979655 -11.39528047 0.008007432 1.98934838 2.40E-07 0.227420526 0.033588287 18089.13751 20.76683476 2747.776023 2419.264912 4.02E-12 11.39528047 -1.98934814 SST(ph)PPGESYFGVSSLQLK ddPTM_A459_MK2206_30min_R2 1 SSTPPGESYFGVSSLQLK 18 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.026)S(0.026)T(0.949)PPGESYFGVSSLQLK 129.76 0.0014374 608300000 52946 60084 46508 54738 59943 51410 65353 45859 42744 55891 TRUE FALSE 56999.58647 57100.31593 48058.55351 50265.7303 57589.33663 53366.44357 56772.0726 51852.92876 46461.79586 54067.28125 1.054234375 1.056097414 0.888865732 0.929688513 1.065142084 0.987037675 1.050026398 0.959044501 0.859332942 1 15.72246819 -7.997401905 24.81270795 0.92284055 1.00104211 0.187269935 0.063424418 109.9378867 1049947.551 0.035995288 0.017130999 1.01E-08 7.997401905 0.078201561 SST(ph)PPLHVHVDENTPVHVHIK ddPTM_A459_MK2206_30min_R2 2 SSTPPLHVHVDENTPVHVHIK 21 0 Q5BJF6-9;Q5BJF6-3;Q5BJF6-4 Q5BJF6-9 ODF2 Outer dense fiber protein 2 1 S(0.312)S(0.312)T(0.377)PPLHVHVDENTPVHVHIK;S(0.142)S(0.142)T(0.716)PPLHVHVDENTPVHVHIK 85.518 0.00035274 13571000 55751 75932 62634 82384 82350 79539 83282 65209 70182 75018 TRUE FALSE 60019.33943 72161.3273 64722.1863 75652.96367 79116.52522 82565.91238 72346.97336 73732.0402 76286.3035 72570.1688 0.827052498 0.994366259 0.891856632 1.042480194 1.090207265 1.137739015 0.996924419 1.016010317 1.051207469 1 16.14708901 -5.781435925 10.17688282 1.051940297 0.913407651 0.58467182 0.055142024 0.232170647 113.7978719 0.015636938 0.023696317 1.65E-06 5.781435925 -0.138532646 SST(ph)PSDINSPR ddPTM_A459_MK2206_30min_R2 1 SSTPSDINSPR 11 0 Q674X7-3;A0A1B0GWK2;Q674X7-4;Q674X7-2;Q674X7;Q674X7-5 Q674X7-3 KAZN Kazrin 1 S(0.021)S(0.004)T(0.975)PSDINSPR 130.69 0.0063988 0 16308 23027 23933 26434 30798 27251 28812 25887 26321 26006 TRUE FALSE 17556.55302 21883.51266 24730.91427 24274.25764 29588.71577 28288.0559 25028.94979 29270.51978 28610.353 25157.42635 0.697867611 0.869862933 0.983046276 0.964894314 1.176142399 1.124441567 0.994893096 1.163494206 1.137252778 1 14.61869672 -4.681104213 0.771409169 1.102583836 0.408125402 0.782369924 0.066072153 1.364106537 0.557737588 0.026043132 0.849230177 2.08E-05 4.681104213 -0.694458435 SST(ph)PSPSPLNLSSSR ddPTM_A459_MK2206_30min_R2 1 SSTPSPSPLNLSSSR 15 0 P37275-3;P37275-4;P37275-5;P37275;P37275-2 P37275-3 ZEB1 Zinc finger E-box-binding homeobox 1 1 S(0.098)S(0.098)T(0.805)PSPSPLNLSSSR 152.11 0.00054593 6520200 24458 35810 29567 37957 30063 27416 32486 28656 29462 29262 TRUE FALSE 26330.52329 34031.72747 30552.74902 34855.79168 28882.57557 28459.33509 28220.54918 32401.43759 32024.5515 28307.18334 0.93017108 1.20222938 1.079328475 1.231340867 1.020326721 1.005375023 0.996939499 1.144636582 1.131322432 1 14.78888058 SST(ph)PTPR ddPTM_A459_MK2206_30min_R2 1 SSTPTPR 7 0 A0A669KBK8;Q04724;F6T2C8;A0A669KAE5 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 S(0.004)S(0.004)T(0.992)PTPR 113.5 0.033 4354000 16893 6388.1 8542.2 12466 17624 11205 14459 80772 41698 19994 TRUE FALSE 18186.34107 6070.876243 8826.992685 11447.48792 16931.99321 11631.41413 12560.51593 91329.17773 45324.81667 19341.59742 0.940270893 0.313876673 0.456373509 0.591858453 0.875418552 0.601367812 0.649404269 4.721904596 2.343385383 1 14.23941933 -7.689974546 13.86732309 2.899015573 0.619320554 0.537269573 0.867652757 0.686384445 131.9951227 0.378567555 0.218511901 2.04E-08 7.689974546 -2.279695019 SST(ph)VPSSNTASGGMTR ddPTM_A459_MK2206_30min_R1 2 SSTVPSSNTASGGMTR 16 0 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YIY6;P27448-6;P27448-7;A2SY06;H0YKP9 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 S(0.355)S(0.065)T(0.581)VPSSNTASGGMTR;SS(0.001)T(0.995)VPS(0.002)S(0.002)NTASGGMTR 188 2.08E-06 5982800 2725.54 3054.41 2351.18 1981.62 2327.91 2226.22 2822.2 2363.77 2216.93 2183.14 TRUE FALSE 2493.718511 2855.567354 2191.588452 2134.244716 2235.184415 2352.266653 2633.936187 2343.103808 2447.387807 2453.603865 1.016349275 1.163825748 0.893212015 0.869840787 0.910980149 0.958698625 1.073496918 0.954964182 0.99746656 1 11.26068663 -5.264488345 24.99284646 0.95514137 1.090087512 0.402740408 0.064622561 249.5948813 2045983.151 0.017899732 0.040023205 5.44E-06 5.264488345 0.134946141 SST(ph)VTEAPIAVVTSR ddPTM_A459_MK2206_30min_R2 1 SSTVTEAPIAVVTSR 15 0 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 S(0.006)S(0.006)T(0.987)VTEAPIAVVTSR 112.02 0.0072743 3221400 21891 36892 25952 30799 35635 33885 28174 22130 24161 18805 TRUE FALSE 23566.99179 35059.99693 26817.22673 28282.62318 34235.79085 35174.51742 24474.71996 25022.46698 26262.48011 18191.39439 1.295502219 1.927284747 1.474171037 1.554725414 1.881977275 1.933580058 1.345400986 1.375511214 1.443676034 1 14.15096851 -8.395891663 0.832755129 1.025321694 1.666867313 0.437728797 0.218506647 0.569091542 0.87983805 0.211209303 0.077899518 4.02E-09 8.395891663 0.641545619 SST(ph)VTGGEEPTPSVAYVHTTPGLPSGWEER ddPTM_A459_MK2206_30min_R1 1 SSTVTGGEEPTPSVAYVHTTPGLPSGWEER 30 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 S(0.042)S(0.042)T(0.69)VT(0.223)GGEEPT(0.002)PSVAYVHTTPGLPSGWEER 122.68 5.02E-16 3313800 381.93 230.47 381.58 343.76 660.47 714.63 752.6 818.82 490.42 431.1 TRUE FALSE 349.4448479 215.4663611 355.6794127 370.2364548 634.1620813 755.091733 702.3954272 811.6611431 541.400914 484.5079226 0.721236602 0.44471174 0.734104431 0.764149434 1.308878662 1.558471385 1.449708858 1.675227804 1.117424275 1 8.920376446 -6.22503365 2.659313399 1.413719936 0.622842195 0.736455786 0.20091828 0.129494009 1.814041574 0.062385523 0.08070339 5.96E-07 6.22503365 -0.790877741 SSTCS(ph)SGEDSVFSHEPLPEEPCLPR ddPTM_A459_MK2206_30min_R2 1 SSTCSSGEDSVFSHEPLPEEPCLPR 25 0 E7EU09;A0A3B3ISD1;P11362-6;P11362-5;P11362-4;P11362-14;P11362-3;P11362-20;P11362-7;P11362-2;P11362-19;P11362;P11362-21 E7EU09 FGFR1 Fibroblast growth factor receptor;Fibroblast growth factor receptor 1 1 S(0.027)S(0.027)T(0.113)CS(0.4)S(0.4)GEDS(0.033)VFSHEPLPEEPCLPR 81.224 0.00011713 2714600 4056.3 5506.8 5989.4 5879.2 6582.4 8116.7 6646.5 4856.4 5922.6 5075.1 TRUE FALSE 4366.853447 5233.34032 6189.083607 5398.850553 6323.941902 8425.586706 5773.806566 5491.148155 6437.737042 4909.499903 0.889470116 1.065961997 1.260634225 1.099674236 1.288103071 1.716180237 1.176047801 1.118474033 1.311281632 1 12.26136036 -4.712271112 1.091523244 1.273367391 0.650174893 0.276494744 0.182707802 2.60162862 2.312448328 0.060092627 1.95045667 1.94E-05 4.712271112 -0.623192497 SSTELHPDLLTDCLTVQSLQPAT(ph)SPR ddPTM_A459_MK2206_30min_R1 1 SSTELHPDLLTDCLTVQSLQPATSPR 26 0 Q8NEA6-2;Q8NEA6 Q8NEA6-2 GLIS3 Zinc finger protein GLIS3 1 SSTELHPDLLTDCLTVQS(0.043)LQPAT(0.912)S(0.045)PR 131.7 2.56E-09 0 1045.9 796.03 805.93 732.05 1173.8 1215.9 1018.4 1016.4 771.05 826.28 TRUE FALSE 956.9407128 744.2083023 751.225717 788.4326178 1127.04506 1284.743207 950.4643942 1007.513722 851.2034067 928.6458045 1.030468999 0.801390906 0.808947516 0.849013277 1.213643625 1.383458797 1.023495061 1.084927878 0.916607174 1 9.858984632 -6.249720794 24.6696655 1.117913966 0.862842872 0.414429927 0.133820853 616.0827451 1296960.314 0.041911074 0.053649441 5.63E-07 6.249720794 -0.255071094 SSTELHPDLLTDCLTVQSLQPATS(ph)PR ddPTM_A459_MK2206_30min_R1 2 SSTELHPDLLTDCLTVQSLQPATSPR 26 0 Q8NEA6-2;Q8NEA6 Q8NEA6-2 GLIS3 Zinc finger protein GLIS3 1 SSTELHPDLLTDCLTVQSLQPAT(0.098)S(0.902)PR;SSTELHPDLLTDCLTVQS(0.002)LQPAT(0.243)S(0.755)PR 196.63 4.27E-32 29705000 3521.1 2909.3 3115.7 2560.91 4569.3 3958.3 3792.6 3401.3 2545.02 2216.92 TRUE FALSE 3221.611955 2719.904041 2904.214965 2758.151732 4387.295105 4182.415525 3539.602574 3371.562793 2809.583936 2491.568786 1.293005424 1.091643167 1.165617012 1.106994014 1.760856505 1.678627356 1.420632091 1.353188726 1.127636512 1 11.28283869 SSTELHPDLLTDCLTVQSLQPATS(ph)PR ddPTM_A459_MK2206_30min_R2 2 SSTELHPDLLTDCLTVQSLQPATSPR 26 0 Q8NEA6-2;Q8NEA6 Q8NEA6-2 GLIS3 Zinc finger protein GLIS3 1 SSTELHPDLLTDCLTVQSLQPAT(0.102)S(0.898)PR;SSTELHPDLLTDCLTVQSLQPAT(0.082)S(0.918)PR 208.45 3.48E-33 19332300 52052 74206 58348 91950 78902 91315 83553 64138 68785 67554 TRUE FALSE 56037.14114 70521.03795 60293.2932 84437.39087 75803.91103 94790.05631 72582.39073 72521.05682 74767.79497 65349.71851 0.857496289 1.079133002 0.92262514 1.292084997 1.159973031 1.450504432 1.11067641 1.109737861 1.144118088 1 15.9958934 -5.752696698 24.99509578 1.193007344 0.965689581 0.406689617 0.1252982 188.8214748 539829.8846 0.033907609 0.057583622 1.77E-06 5.752696698 -0.227317763 SSTETCYS(ph)AIPK ddPTM_A459_MK2206_30min_R2 1 SSTETCYSAIPK 12 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 SST(0.004)ET(0.087)CY(0.363)S(0.545)AIPK 100.02 0.014865 0 12995 16317 13564 14431 13195 13437 16553 11914 13672 15852 TRUE FALSE 13989.90719 15506.72151 14016.21699 13251.94114 12676.898 13948.35445 14379.57122 13471.20071 14861.16585 15334.75054 0.912300931 1.011214461 0.914016629 0.864177158 0.826677811 0.90959122 0.937711454 0.878475374 0.969116896 1 13.90451708 -8.450160772 4.551411087 0.999513624 0.907749154 0.324326836 0.045873546 0.254382872 9.423883508 0.048580462 0.012683116 3.55E-09 8.450160772 -0.091764471 SSTFPQTDVLSS(ph)SLEAEHR ddPTM_A459_MK2206_30min_R1 1 SSTFPQTDVLSSSLEAEHR 19 0 D4PHA4;Q86WP2-4;Q86WP2-3;Q86WP2;Q86WP2-2 D4PHA4 GPBP1 Vasculin 1 SSTFPQTDVLS(0.002)S(0.677)S(0.321)LEAEHR 234.73 1.88E-24 46567000 3787.3 3797.9 3992.6 3188 5126.9 4381.8 5165.5 4612.8 4519.4 3859.9 TRUE FALSE 3465.170247 3550.65602 3721.593436 3433.540312 4922.684717 4629.893729 4820.91892 4572.470776 4989.207803 4338.093553 0.798777206 0.818483045 0.857886855 0.791486 1.13475762 1.067264611 1.111298975 1.054027701 1.150092256 1 12.08284545 -6.259210678 24.99951981 1.089245743 0.819733505 0.903390779 0.043177076 52.43354741 588151.134 0.012043278 0.01480475 5.51E-07 6.259210678 -0.269512238 SSTFPQTDVLSS(ph)SLEAEHR ddPTM_A459_MK2206_30min_R2 2 SSTFPQTDVLSSSLEAEHR 19 0 D4PHA4;Q86WP2-4;Q86WP2-3;Q86WP2;Q86WP2-2 D4PHA4 GPBP1 Vasculin 1 SSTFPQTDVLS(0.004)S(0.796)S(0.2)LEAEHR;SSTFPQTDVLS(0.057)S(0.6)S(0.343)LEAEHR 227.6 1.12E-23 36556800 101041 148044 136702 166253 164930 185228 212000 176629 225050 215690 TRUE FALSE 108776.7766 140692.3502 141259.5765 152669.5981 158454.0195 192276.9813 184164.1453 199715.0168 244624.4422 208652.053 0.521330968 0.674291713 0.67701024 0.731694685 0.759417496 0.92151972 0.882637591 0.957167753 1.172403716 1 17.67073959 -6.620696326 0.525703212 1.075089745 0.556493792 0.867600925 0.06620289 0.349874019 0.206118065 0.05618318 0.081834747 2.39E-07 6.620696326 -0.518595953 SSTFPQTDVLSSS(ph)LEAEHR ddPTM_A459_MK2206_30min_R1 2 SSTFPQTDVLSSSLEAEHR 19 0 D4PHA4;Q86WP2-4;Q86WP2-3;Q86WP2;Q86WP2-2 D4PHA4 GPBP1 Vasculin 1 SSTFPQTDVLS(0.015)S(0.183)S(0.802)LEAEHR;SSTFPQTDVLSS(0.002)S(0.998)LEAEHR 308.02 1.20E-116 17828800 3786.9 3965.1 3745.1 3618 4830.1 4393.1 4974 5270.8 4754.9 4311.2 TRUE FALSE 3464.804269 3706.971269 3490.893046 3896.658987 4637.706889 4641.833526 4642.193536 5224.717951 5249.188871 4845.304004 0.715085011 0.765064744 0.720469354 0.80421352 0.957154987 0.958006664 0.958080965 1.078305499 1.083355939 1 12.24237147 -6.371970332 0.92399967 1.044360774 0.715185738 0.914826143 0.039053543 0.160066851 0.295092173 0.021113061 0.029840438 4.25E-07 6.371970332 -0.329175036 SSTFPQTDVLSSS(ph)LEAEHR ddPTM_A459_MK2206_30min_R2 2 SSTFPQTDVLSSSLEAEHR 19 0 D4PHA4;Q86WP2-4;Q86WP2-3;Q86WP2;Q86WP2-2 D4PHA4 GPBP1 Vasculin 1 SSTFPQTDVLS(0.01)S(0.234)S(0.756)LEAEHR;SSTFPQTDVLS(0.006)S(0.225)S(0.769)LEAEHR 201.85 9.89E-16 38189100 65210 90944 89940 109351 100992 124003 143250 123805 137671 144388 TRUE FALSE 70202.52774 86427.8532 92938.55471 100416.6735 97026.54664 128722.0211 124441.1029 139986.7386 149645.3747 139676.6314 0.502607537 0.618771031 0.665383707 0.718922503 0.69465125 0.921571631 0.890922853 1.00222018 1.071370159 1 17.09173115 -6.608142075 0.580930266 1.054496431 0.534984755 0.923658322 0.050489178 0.226421861 0.166542135 0.040437154 0.054960374 2.47E-07 6.608142075 -0.519511676 SSTGPEPPAPT(ph)PLLAER ddPTM_A459_MK2206_30min_R1 2 SSTGPEPPAPTPLLAER 17 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSTGPEPPAPT(1)PLLAER;S(0.001)ST(0.001)GPEPPAPT(0.997)PLLAER 175.19 3.04E-07 19986600 6436.1 5793.3 5540.1 5191.1 6433.8 6041 6258.2 5077.8 4958.9 4744.9 TRUE FALSE 5888.675898 5416.155117 5164.053448 5590.919421 6177.528122 6383.036199 5840.726897 5033.40533 5474.395401 5332.734034 1.104250814 1.015643211 0.968368836 1.0484152 1.158416693 1.196953787 1.095259366 0.943869561 1.026564491 1 12.38065966 -7.748879245 24.97497305 0.988912767 1.082681606 0.306555748 0.064593024 307.9997197 612438.9746 0.035472418 0.020301824 1.78E-08 7.748879245 0.093768838 SSTGPEPPAPT(ph)PLLAER ddPTM_A459_MK2206_30min_R2 1 SSTGPEPPAPTPLLAER 17 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SST(0.006)GPEPPAPT(0.994)PLLAER 95.9 0.01452 9641400 23651 39443 30646 30917 32854 35795 29831 22240 28403 25568 TRUE FALSE 25461.73874 37484.31798 31667.72234 28390.9822 31563.98688 37157.20381 25914.15387 25146.84436 30873.4416 24733.71825 1.029434333 1.515514877 1.280346207 1.147865513 1.276152116 1.502289443 1.047725765 1.016702952 1.24823293 1 14.59419152 -7.301687434 24.98324207 1.079557252 1.294304001 0.328539157 0.149686829 627.7918812 389687.8233 0.061240346 0.041288761 4.99E-08 7.301687434 0.214746749 SSTIFKT(ph)T(ph)K ddPTM_A459_MK2206_30min_R1 1 SSTIFKTTK 9 1 O94916;O94916-4;O94916-5;O94916-2 O94916 NFAT5 Nuclear factor of activated T-cells 5 2 SSTIFKT(1)T(1)K 103.74 0.0212 0 1218.6 1035.1 1157.6 948.62 874.16 895.13 938.15 1055.2 1052.3 837.49 TRUE FALSE 1114.951671 967.7148019 1079.025337 1021.682877 839.3403561 945.811487 875.5677253 1045.974498 1161.690351 941.2445839 1.184550424 1.028122571 1.146381457 1.085459501 0.891734593 1.004851983 0.930223387 1.111267481 1.234206678 1 9.878425848 -1.522890187 0.862552654 1.03773181 52.5346692 0.140753709 0.096947101 1588.765458 4.166881452 0.035428774 160686.0418 0.02999921 1.522890187 51.49693739 SSTLSSSSMSLS(ph)PK ddPTM_A459_MK2206_30min_R1 2 SSTLSSSSMSLSPK 14 0 O15119;O15119-2;O15119-3 O15119 TBX3 T-box transcription factor TBX3 1 SSTLSSS(0.001)S(0.001)MS(0.063)LS(0.936)PK;SSTLSS(0.004)S(0.01)S(0.021)MS(0.003)LS(0.961)PK 197.06 0.00010956 40001000 4952.2 5955.8 6297.1 5493.7 4338.6 3476 4611.1 4621.3 5786.2 5308.4 TRUE FALSE 4530.989385 5568.076337 5869.670397 5916.825726 4165.784375 3672.808116 4303.501932 4580.896461 6387.696196 5966.044668 0.759462866 0.933294443 0.983846203 0.991750155 0.698248942 0.615618608 0.721332503 0.767828053 1.070675221 1 12.54255906 -4.519693769 9.731005595 0.847670314 0.664810778 0.032616078 0.147675767 3874.142336 75369.64396 0.039912706 8167.386254 3.02E-05 4.519693769 -0.182859536 SSTLSSSSMSLS(ph)PK ddPTM_A459_MK2206_30min_R2 3 SSTLSSSSMSLSPK 14 0 O15119;O15119-2;O15119-3 O15119 TBX3 T-box transcription factor TBX3 1 SSTLSSSSMS(0.048)LS(0.951)PK;SSTLSSS(0.003)S(0.008)MS(0.143)LS(0.845)PK;SSTLSSSSMS(0.004)LS(0.996)PK 207.52 6.71E-06 41957000 144419 157605 168845 126130 127230 92414 149629 110839 119812 158379 TRUE FALSE 155475.8297 149778.5649 174474.208 115824.7755 122234.3109 95930.87953 129982.5326 125326.0379 130233.0312 153211.1062 1.014781719 0.977596002 1.138783032 0.755981589 0.797816255 0.626135284 0.848388448 0.817995777 0.850023438 1 17.22516136 -5.770161645 24.9999201 0.7991399 1.037107834 0.543546988 0.095858174 129.2145196 370357.6639 0.026403922 0.039842921 1.70E-06 5.770161645 0.237967934 SSTPGSPTHVS(ph)SGSNASR ddPTM_A459_MK2206_30min_R2 1 SSTPGSPTHVSSGSNASR 18 0 Q14CZ0 Q14CZ0 C16orf72 UPF0472 protein C16orf72 1 SSTPGS(0.042)PT(0.022)HVS(0.906)S(0.023)GS(0.007)NAS(0.001)R 178.99 1.67E-09 1281800 517.06 1046.9 516 3201.7 2413.3 5057.1 2865.8 2414.9 3053.3 959.92 TRUE FALSE 556.6465112 994.9124683 533.2031825 2940.110868 2318.541716 5249.551484 2489.517018 2730.535722 3318.870515 928.597889 0.599448392 1.071413666 0.574202449 3.16618302 2.49681993 5.653202044 2.680941931 2.940493139 3.574066401 1 9.858910191 -5.76530324 24.16887231 3.221107833 0.780660283 0.48195276 1.096864461 50.01464751 312852.2237 0.297907977 0.461729331 1.72E-06 5.76530324 -2.44044755 SSTPLHS(ph)PSPIR ddPTM_A459_MK2206_30min_R1 2 SSTPLHSPSPIR 12 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 SSTPLHS(0.983)PS(0.016)PIR;SST(0.005)PLHS(0.971)PS(0.023)PIR 129.76 0.0022633 100507000 4708.1 3703.2 4092 3509 5392.6 4798.1 4771.3 4619.1 3545.1 3227.9 TRUE FALSE 4307.651372 3462.121007 3814.246441 3779.263788 5177.801323 5069.764276 4453.015283 4578.715696 3913.625831 3627.796621 1.187401561 0.954331615 1.051394783 1.041751835 1.427257882 1.397477534 1.227471038 1.262120282 1.078788653 1 11.82487786 -6.221523229 24.79373656 1.253320775 1.05074033 0.284236903 0.132085568 545.8116168 339028.1596 0.038997919 0.050345538 6.00E-07 6.221523229 -0.202580446 SSTPLHS(ph)PSPIR ddPTM_A459_MK2206_30min_R2 3 SSTPLHSPSPIR 12 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.001)S(0.004)T(0.004)PLHS(0.984)PS(0.006)PIR;S(0.002)S(0.002)T(0.009)PLHS(0.942)PS(0.046)PIR;SS(0.001)T(0.001)PLHS(0.801)PS(0.197)PIR 80.387 0.026618 73515100 98242 132573 112625 143045 117215 135447 140829 112944 116572 129588 TRUE FALSE 105763.4831 125989.6176 116379.8613 131357.7659 112612.5501 140601.5305 122337.9831 127706.1686 126711.2218 125359.5542 0.843681072 1.00502605 0.9283685 1.047848062 0.898316454 1.121586076 0.975896763 1.018719071 1.010782327 1 16.93571243 -3.865208586 1.141304988 1.006272744 8.97E-35 0.38012893 0.058816701 11.38792153 2.566017129 0.01661021 22.52634262 0.000136393 3.865208586 -1.006272744 SSTPLPTISS(ph)SAENTR ddPTM_A459_MK2206_30min_R1 1 SSTPLPTISSSAENTR 16 0 P42166;G5E972;P42167;H0YJH7;P42167-2;P42167-3 P42166;G5E972 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 SSTPLPTIS(0.003)S(0.78)S(0.217)AENTR 276.34 1.28E-129 0 2396.6 2553 2253.2 1886.6 2456.9 2527.5 2165.4 1730.5 2132.6 1749.4 TRUE FALSE 2192.756585 2386.799236 2100.259062 2031.906259 2359.03647 2670.604866 2020.950117 1715.370421 2354.291402 1966.128879 1.115265946 1.213958689 1.068220443 1.033455274 1.199838167 1.358306108 1.02788283 0.872460823 1.19742476 1 10.94114218 -7.486976829 24.9964196 1.010999936 1.161199824 0.273535072 0.111476169 762.9543547 531202.4181 0.047530072 0.032030872 3.26E-08 7.486976829 0.150199887 SSTPLPTISS(ph)SAENTR ddPTM_A459_MK2206_30min_R2 1 SSTPLPTISSSAENTR 16 0 P42166;G5E972;P42167;H0YJH7;P42167-2;P42167-3 P42166;G5E972 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 SSTPLPT(0.043)IS(0.128)S(0.699)S(0.128)AENT(0.001)R 122.75 0.0014213 2710000 11782 18028 13907 22177 13280 25941 18573 11178 17660 12035 TRUE FALSE 12684.03898 17132.75574 14370.65244 20365.06816 12758.56047 26928.20293 16134.34279 12639.00298 19196.03488 11642.29894 1.089478895 1.471595587 1.234348346 1.749230824 1.095879821 2.312962679 1.385838216 1.085610587 1.648818243 1 13.50708835 -11.24815045 2.697474734 0.916950825 1.457551638 0.123002588 0.362377106 80726431.97 65315663.6 45073682.83 0.086988001 5.65E-12 11.24815045 0.540600813 SSTPLPTISSS(ph)AENTR ddPTM_A459_MK2206_30min_R1 1 SSTPLPTISSSAENTR 16 0 P42166;G5E972;P42167;H0YJH7;P42167-2;P42167-3 P42166;G5E972 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 SSTPLPTISS(0.033)S(0.967)AENTR 199.61 8.07E-07 10066000 3861 3885 3599.9 3762 3529.6 3569.6 3481.5 2648.9 3312.2 2947 TRUE FALSE 3532.601675 3632.085794 3355.548818 4051.749892 3389.008558 3771.707667 3249.255487 2625.740947 3656.515043 3312.096609 1.066575675 1.096612274 1.013119246 1.223318753 1.02322153 1.138767407 0.981026785 0.792773055 1.10398804 1 11.69352904 -7.388237127 5.57875678 0.947973328 1.09228284 0.303981304 0.090784667 0.248797948 10.25874833 0.036615769 0.024324406 4.09E-08 7.388237127 0.144309513 SSTPLPTISSS(ph)AENTR ddPTM_A459_MK2206_30min_R2 2 SSTPLPTISSSAENTR 16 0 P42166;G5E972;P42167;H0YJH7;P42167-2;P42167-3 P42166;G5E972 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin" 1 SSTPLPT(0.007)IS(0.145)S(0.145)S(0.518)AENT(0.186)R;SSTPLPTIS(0.006)S(0.032)S(0.962)AENTR 193.31 1.15E-06 18896400 95043 81740 81314 92254 71014 82845 95587 57621 65482 68934 TRUE FALSE 102319.5652 77680.91046 84024.96818 84716.55309 68225.63354 85997.72453 83036.31208 65152.26254 71177.506 66684.68923 1.534378676 1.16489874 1.260033887 1.270404857 1.023107918 1.289617235 1.245208054 0.977019812 1.067374038 1 16.02506794 -1.522878745 0.200808815 1.001527157 2.926713867 0.531650106 0.111921116 46.54631194 0.563802161 0.208859436 28.22733551 0.03 1.522878745 1.925186711 SSTQTLEDS(ph)WR ddPTM_A459_MK2206_30min_R1 1 SSTQTLEDSWR 11 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 SSTQTLEDS(1)WR 152 0.00058593 3163800 1364 1158 1186.2 1052.5 1119.1 1187.4 1250.7 980.09 1282.9 1787.7 TRUE FALSE 1247.984637 1082.61399 1105.684049 1133.563732 1074.523877 1254.629562 1167.268085 971.5211765 1416.262046 2009.173772 0.621143205 0.538835418 0.550317779 0.564193973 0.534808831 0.624450498 0.580969203 0.483542633 0.704897737 1 10.97238663 -8.597426957 4.22215868 0.999893037 0.563740856 0.919627249 0.03944504 0.088478374 4.142623108 0.037239099 0.009734606 2.53E-09 8.597426957 -0.436152182 SSTQTLEDS(ph)WR ddPTM_A459_MK2206_30min_R2 2 SSTQTLEDSWR 11 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 SSTQTLEDS(1)WR;SSTQT(0.003)LEDS(0.997)WR 126.1 0.0032237 7787700 51524 38783 38244 37419 36586 32939 45022 34647 30421 55676 TRUE FALSE 55468.71706 36857.09262 39519.03587 34361.748 35149.44981 34192.51673 39110.55732 39175.48186 33066.96359 53859.29668 1.029881942 0.684321833 0.733745858 0.637991027 0.652616205 0.634848927 0.726161679 0.727367126 0.613950899 1 15.71690777 -10.05840229 11.70799702 0.999999783 0.70940321 0.362184733 0.112927302 0 0 0.107222626 0.026005307 8.74E-11 10.05840229 -0.290596573 SSTRPPS(ph)IADPDPSDLPVDR ddPTM_A459_MK2206_30min_R1 1 SSTRPPSIADPDPSDLPVDR 20 1 Q9NX94;Q9NX94-2 Q9NX94 WBP1L WW domain binding protein 1-like 1 S(0.006)S(0.006)T(0.024)RPPS(0.965)IADPDPSDLPVDR 82.381 0.0018308 3336200 3597.1 3166.8 3494.5 2625 3457 3055.8 3313.9 3216.4 3219.7 2642.4 TRUE FALSE 3291.147756 2960.640744 3257.303076 2827.177955 3319.30037 3228.816755 3092.835778 3188.279354 3554.399337 2969.760461 1.108219939 0.996929141 1.096823504 0.95198855 1.117699698 1.087231377 1.041442843 1.073581319 1.196863984 1 11.53613085 SSTRPPS(ph)IADPDPSDLPVDR ddPTM_A459_MK2206_30min_R2 2 SSTRPPSIADPDPSDLPVDR 20 1 Q9NX94;Q9NX94-2 Q9NX94 WBP1L WW domain binding protein 1-like 1 S(0.007)S(0.007)T(0.027)RPPS(0.96)IADPDPSDLPVDR;SST(0.003)RPPS(0.997)IADPDPSDLPVDR 96.045 0.00056048 7951400 48761 49012 41117 48222 48279 40651 45923 38332 50061 48922 TRUE FALSE 52494.17965 46578.13535 42487.82026 44282.10835 46383.32388 42198.00229 39893.25494 43342.12401 54415.21529 47325.67915 1.109211333 0.984204267 0.897775183 0.935688809 0.980087866 0.891651278 0.842951557 0.915826773 1.149803157 1 15.53033559 -8.247673889 24.89993434 1.074901584 0.940151668 0.319122609 0.075858246 767.9914316 1389200.402 0.053627798 0.020033632 5.65E-09 8.247673889 -0.134749915 SSTS(ph)FANIQENSN ddPTM_A459_MK2206_30min_R1 1 SSTSFANIQENSN 13 0 Q86WC4 Q86WC4 OSTM1 Osteopetrosis-associated transmembrane protein 1 1 S(0.001)S(0.001)T(0.031)S(0.967)FANIQENSN 152 0.00018039 0 1320.8 1452.2 1345.6 1173.6 1645.4 1248.2 1728.7 1663.7 1409 1285 TRUE FALSE 1208.459024 1357.661516 1254.264421 1263.990875 1579.860234 1318.872005 1613.381577 1649.154446 1555.470592 1444.195501 0.836769692 0.94008153 0.868486586 0.875221446 1.093937928 0.913222624 1.117149012 1.141919113 1.077049881 1 10.49605034 -6.487295429 1.018455535 1.086480594 0.873987689 0.580556672 0.070173722 0.364582734 0.81132423 0.034568536 0.041812625 3.26E-07 6.487295429 -0.212492905 SSTSPCGTSKS(ph)PNR ddPTM_A459_MK2206_30min_R1 1 SSTSPCGTSKSPNR 14 1 O75376-2;O75376;A0A088AWL3;O75376-3;H0Y459 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(0.001)ST(0.001)SPCGT(0.049)S(0.223)KS(0.726)PNR 104.95 0.028457 787970 337.26 345.36 241.15 243.96 285.22 337.75 645.47 273.49 287.73 171.74 TRUE FALSE 308.574266 322.8770012 224.7814099 262.7498415 273.8590834 356.8731131 602.411874 271.0989058 317.6405632 193.0164478 1.59869415 1.672795272 1.164571271 1.361282132 1.418838066 1.848925919 3.121039067 1.404537846 1.64566578 1 7.592579981 -6.789813073 6.315545911 1.914868742 1.435270523 0.086953009 0.528138041 0.344884095 42.76234209 0.187501525 0.169359257 1.62E-07 6.789813073 -0.479598218 SSTVAS(ph)LDTDSTK ddPTM_A459_MK2206_30min_R1 2 SSTVASLDTDSTK 13 0 C9IZZ8;C9J6Y2;C9J0J6;C9JZ07;G3V1A3;C9J5T5;C9JBU8;A8MPU2;O14713-2;O14713 C9IZZ8 ITGB1BP1 Integrin beta-1-binding protein 1 1 S(0.039)S(0.004)T(0.17)VAS(0.737)LDT(0.05)DSTK;SSTVAS(0.909)LDT(0.088)DS(0.002)TK 165.51 0.00035639 19598400 7932.8 9301.6 9236.6 7926.2 8883.8 8110.1 8742.8 9336.3 8686.6 8342.2 TRUE FALSE 7258.073703 8696.064149 8609.645327 8536.677297 8529.939434 8569.286853 8159.583764 9254.673713 9589.603155 9375.694716 0.774137162 0.927511444 0.91829412 0.91051144 0.909792788 0.913989535 0.87029111 0.98709205 1.022815209 1 13.19470988 -1.522878745 0.132578882 1.037844182 0.377919371 0.55068522 0.045160333 71.70883092 0.643197492 0.242021585 8.872075837 0.03 1.522878745 -0.659924811 SSTVAS(ph)LDTDSTK ddPTM_A459_MK2206_30min_R2 2 SSTVASLDTDSTK 13 0 C9IZZ8;C9J6Y2;C9J0J6;C9JZ07;G3V1A3;C9J5T5;C9JBU8;A8MPU2;O14713-2;O14713 C9IZZ8 ITGB1BP1 Integrin beta-1-binding protein 1 1 SSTVAS(0.951)LDT(0.048)DS(0.001)T(0.001)K;SSTVAS(0.996)LDT(0.002)DS(0.001)TK 102.5 0.0092472 15849700 56913 74222 73430 68839 62332 55679 84361 60642 58578 79320 TRUE FALSE 61270.30304 70536.24341 75878.11955 63214.63349 59884.53249 57797.90336 73284.29936 68568.11762 63673.00856 76731.7949 0.798499541 0.91925705 0.988874555 0.823838848 0.780439615 0.753245815 0.955070834 0.893607633 0.829812578 1 16.22753688 -10.4153019 6.609832926 1.000000007 0.863008052 0.244474864 0.073539803 7.57E-09 1.37E-09 0.076093462 0.018455375 3.84E-11 10.4153019 -0.136991955 SSTVT(ph)GGEEPTPSVAYVHTTPGLPSGWEER ddPTM_A459_MK2206_30min_R1 1 SSTVTGGEEPTPSVAYVHTTPGLPSGWEER 30 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 S(0.057)S(0.057)T(0.161)VT(0.607)GGEEPT(0.115)PS(0.003)VAY(0.001)VHTTPGLPSGWEER 57.957 0.03289 0 224.45 257.27 267.68 253.71 410.76 358.49 195.14 180.13 292.35 198.71 TRUE FALSE 205.3593489 240.5216762 249.5106274 273.2507882 394.3985594 378.787394 182.1225667 178.5551424 322.7408287 223.327695 0.919542688 1.076989919 1.117239971 1.223541882 1.766008284 1.696105779 0.815494767 0.799520823 1.445144673 1 7.803018361 -7.292404718 24.97480016 0.998333498 1.299184965 0.180288471 0.29671444 1304.437387 1052076.145 0.136524861 0.092055964 5.10E-08 7.292404718 0.300851467 SSVKT(ph)PESIVPIAPELQPSTSR ddPTM_A459_MK2206_30min_R2 1 SSVKTPESIVPIAPELQPSTSR 22 1 Q14676-3;Q14676;Q14676-2 Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.023)S(0.023)VKT(0.927)PES(0.026)IVPIAPELQPSTSR 73.865 0.0029681 4803700 21886 18707 19186 24068 21904 16656 23914 22815 14434 24216 TRUE FALSE 23561.60899 17778.03758 19825.65166 22101.56741 21043.9389 17289.85575 20774.06307 25796.99884 15689.44323 23425.8339 1.005795955 0.758907352 0.846315728 0.943469825 0.898321869 0.738067888 0.886801433 1.101220086 0.669749615 1 14.51581278 -10.87809259 3.254372495 1.001001669 0.874089807 0.089869804 0.121980455 494708643.2 627256891.5 4656276.703 0.029116382 1.32E-11 10.87809259 -0.126911862 SSVS(ph)SVGAR ddPTM_A459_MK2206_30min_R1 1 SSVSSVGAR 9 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67;Q8N4M4;E9PRA3;E9PRP1;E9PS62;Q9BZ68 Q9BZ67-2 FRMD8;FRMD8P1 FERM domain-containing protein 8;Putative FERM domain-containing protein FRMD8P1 1 S(0.001)S(0.001)VS(0.499)S(0.499)VGAR 101.46 0.013342 0 2656.1 2493.1 2853.5 2517.4 4016.5 2869.5 3158.6 3390.8 2202.2 2373.7 TRUE FALSE 2430.184747 2330.798737 2659.81237 2711.290584 3856.5143 3031.96861 2947.895557 3361.154593 2431.126571 2667.771877 0.910941737 0.873687423 0.997016422 1.016312754 1.445593731 1.136517195 1.105002861 1.259910798 0.911294775 1 11.38141959 -5.846245483 2.930734668 1.157217589 0.912890601 0.316671582 0.139486179 0.277637545 4.805588 0.040429049 0.066758452 1.42E-06 5.846245483 -0.244326988 SSWLS(ph)TEGGR ddPTM_A459_MK2206_30min_R2 1 SSWLSTEGGR 10 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 S(0.001)S(0.002)WLS(0.995)T(0.003)EGGR 92.611 0.026382 3846000 8234.7 10049 8742.3 9252.4 9003.2 7707.3 11113 6353.7 8062.8 10603 TRUE FALSE 8865.154963 9549.981273 9033.763919 8496.449323 8649.689131 8000.606702 9653.849751 7184.150406 8764.08777 10257.02498 0.864300807 0.93106737 0.880739195 0.828354161 0.843294147 0.780012403 0.94119394 0.700412685 0.854447346 1 13.32432472 -5.629173378 4.568243358 0.837975427 0.899507052 0.045552195 0.078651157 0.478484824 16.9743126 0.020354599 0.036419708 2.35E-06 5.629173378 0.061531625 SSWSLSPSRS(ph)R ddPTM_A459_MK2206_30min_R2 1 SSWSLSPSRSR 11 1 F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8;Q8N2M8-4 F5H0Q6 CLASRP CLK4-associating serine/arginine rich protein 1 SSWSLSPSRS(1)R 67.334 0.041303 1840200 883.95 3350.6 1461.1 1332.9 1061 589.65 1076.8 965.02 1450.1 808.17 TRUE FALSE 951.6258916 3184.214076 1509.812345 1223.997806 1019.339809 612.0895439 935.4148665 1091.151427 1576.227077 781.7994791 1.217225026 4.072929391 1.931201523 1.565616042 1.303837923 0.78292396 1.196489498 1.39569219 2.016152631 1 9.610654813 -5.579316261 3.829121523 1.315365523 2.719261457 0.347285533 0.715470589 0.205277622 6.153608171 0.187667939 0.35600332 2.63E-06 5.579316261 1.403895935 SSWSS(ph)SDEKR ddPTM_A459_MK2206_30min_R1 1 SSWSSSDEKR 10 1 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;A0A087WYS3;Q9ULU4-8;Q9ULU4-17;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 SSWS(0.006)S(0.497)S(0.497)DEKR 136.49 0.0069297 0 2458.5 2631.5 2694.2 2558.3 2503.8 2275.9 2492.8 2459 2280.4 1940 TRUE FALSE 2249.391665 2460.188872 2511.32521 2755.340709 2404.068344 2404.759491 2326.50986 2437.501222 2517.45574 2180.341846 1.031669263 1.128350069 1.151803427 1.263719592 1.102610743 1.102927734 1.067039035 1.117944522 1.154615156 1 11.09033863 -6.490599283 24.93804355 1.095450024 1.148319424 0.13765373 0.064277286 1377.711137 1064374.208 0.020448467 0.02316472 3.23E-07 6.490599283 0.0528694 SSYLES(ph)PR ddPTM_A459_MK2206_30min_R1 1 SSYLESPR 8 0 H0YIQ2;P49750-3;P49750-1;P49750;F8VU51 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 SSYLES(1)PR 99.013 0.018995 8691700 3561.3 3283.6 3217.7 2395 3071.7 2847.8 3274.4 3055.7 3129 3261.7 TRUE FALSE 3258.392734 3069.837043 2999.291489 2579.463315 2949.347685 3009.039975 3055.97075 3028.984337 3454.270747 3665.784021 0.888866533 0.837429872 0.818185543 0.703659381 0.804561226 0.820844861 0.833647245 0.826285542 0.942300672 1 11.83990607 -8.365686384 2.089259197 1.000879234 0.811316393 0.676868108 0.043589761 0.186733163 1.615443611 0.04452477 0.01262258 4.31E-09 8.365686384 -0.189562841 SSYLES(ph)PR ddPTM_A459_MK2206_30min_R2 4 SSYLESPR 8 0 H0YIQ2;P49750-3;P49750-1;P49750;F8VU51 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 SSYLES(0.999)PR;SSYLES(1)PR;SSYLES(1)PR;SSYLES(1)PR 114.4 0.010337 40988300 217117 208168 192221 228481 199488 207542 220805 187138 176236 215082 TRUE FALSE 233739.6445 197830.6798 198629.5522 209813.3714 191655.0988 215440.1562 191813.0383 211597.5791 191564.6887 208063.892 1.123403212 0.950816972 0.954656526 1.008408376 0.921135796 1.035451919 0.921894887 1.016983664 0.920701266 1 17.66666709 -4.757000526 24.99488841 0.970271226 1.12340344 0.560538459 0.040746595 90.80813803 511270.5754 0.009051455 0.069976955 1.75E-05 4.757000526 0.153132214 ST(ph)DSSSVSGSLQQETK ddPTM_A459_MK2206_30min_R1 1 STDSSSVSGSLQQETK 16 0 Q9H8G2;A0A3B3ISJ3 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 S(0.128)T(0.858)DS(0.004)S(0.009)SVSGSLQQETK 240.5 4.15E-21 8142300 2033.9 2475.3 2099 1937.9 2071.2 1592.8 2054 2084.6 2194.9 1677 TRUE FALSE 1860.906125 2314.15752 1956.525728 2087.157394 1988.699718 1682.98296 1916.981408 2066.374562 2423.06771 1884.759421 0.987344116 1.227826477 1.038077171 1.107386636 1.05514778 0.892943121 1.017096074 1.096359853 1.285611141 1 10.88016467 -11.00173352 2.91233102 0.997719594 1.075241594 0.045290302 0.107303931 72966696.32 85295938.33 1351096.274 0.027206869 9.96E-12 11.00173352 0.077522 ST(ph)ELLIR ddPTM_A459_MK2206_30min_R1 1 STELLIR 7 0 K7EK07;Q5TEC6;Q6NXT2;Q71DI3;Q16695;P84243;P68431;K7EMV3;K7EP01;A0A590UJJ6;B4DEB1;K7ES00 K7EK07 H3F3B;HIST2H3PS2;H3F3C;HIST2H3A;HIST3H3;H3F3A;HIST1H3A Histone H3;Histone H3.3C;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 1 S(0.016)T(0.984)ELLIR 131.22 0.0093901 2205200 3823.1 2963.7 3093.2 2874 3046.3 3583.3 3195 2922 2605.1 3232 TRUE FALSE 3497.925269 2770.762591 2883.242202 3095.355978 2924.95942 3786.183349 2981.86738 2896.453262 2875.909467 3632.40456 0.962977887 0.762790197 0.793755804 0.852150669 0.805240543 1.042335259 0.820907289 0.797392805 0.791737104 1 11.82670918 -4.728015962 24.09163932 0.847209742 0.962979213 0.120961475 0.089128786 6958.894458 5015518.138 0.022074804 3.646462125 1.87E-05 4.728015962 0.115769471 ST(ph)ELVLSPDMPR ddPTM_A459_MK2206_30min_R2 3 STELVLSPDMPR 12 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 S(0.391)T(0.609)ELVLSPDMPR;S(0.06)T(0.94)ELVLSPDMPR;S(0.374)T(0.626)ELVLSPDMPR 145.81 0.0068583 6405900 44532 51242 39229 52641 47668 50229 49037 37509 43265 40525 TRUE FALSE 47941.40416 48697.39679 40536.87528 48340.06191 45796.31481 52140.49979 42598.383 42411.55509 47028.11149 39202.67257 1.222911629 1.24219584 1.034033463 1.233080776 1.168193692 1.330024113 1.08661936 1.081853667 1.199614935 1 15.25866439 -9.545462021 0.398665571 0.969722472 1.195943112 0.302682702 0.083320954 6.050644729 1.267428208 0.383000758 0.059720539 2.85E-10 9.545462021 0.22622064 ST(ph)GGAPTFNVTVTK ddPTM_A459_MK2206_30min_R2 2 STGGAPTFNVTVTK 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 1 S(0.173)T(0.827)GGAPTFNVTVTK;S(0.025)T(0.975)GGAPTFNVTVTK 190.34 0.0002373 8004500 43730 41941 35721 49737 40191 36482 46893 36704 27216 39443 TRUE FALSE 47078.00242 39858.27093 36911.92031 45673.328 38612.8994 37870.34807 40735.89277 41501.33882 29583.19848 38155.97814 1.233830312 1.044614052 0.967395468 1.197016306 1.01197509 0.992514146 1.067614952 1.087675925 0.775322765 1 15.21962149 -1.522878745 0.231414107 0.957977424 2.106387741 0.284934391 0.101895217 76.69889787 1.007012751 0.147510716 33.42886345 0.03 1.522878745 1.148410317 ST(ph)LSPPEASPGPPAAPR ddPTM_A459_MK2206_30min_R2 1 STLSPPEASPGPPAAPR 17 0 Q6NUJ5-2;Q6NUJ5 Q6NUJ5-2 PWWP2B PWWP domain-containing protein 2B 1 S(0.196)T(0.71)LS(0.093)PPEASPGPPAAPR 134.88 0.0012126 9195800 31638 31011 41284 33789 43050 32633 39190 35718 28662 39201 TRUE FALSE 34060.22961 29471.03883 42660.38795 31028.33061 41359.64069 33874.87168 34044.30592 40386.46524 31154.96895 37921.87458 0.898168405 0.777151424 1.124954619 0.818217215 1.090653908 0.893280516 0.897748497 1.064991267 0.821556669 1 15.21074266 -5.21860496 24.99981811 0.960682297 0.83765992 0.18530019 0.10572737 758.8010707 442863.1997 0.024525905 0.064888526 6.04E-06 5.21860496 -0.123022377 ST(ph)PAMMNGQGSTTSSSK ddPTM_A459_MK2206_30min_R1 2 STPAMMNGQGSTTSSSK 17 0 Q6ZN18-2;Q6ZN18;F5GZR7;A0A669KBC9;A0A669KBL4;G5EA50;Q6ZN18-3 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 S(0.142)T(0.858)PAMMNGQGSTTSSSK;S(0.125)T(0.875)PAMMNGQGSTTSSSK 186.94 1.46E-07 11013600 1443.83 1859.05 2157.5 1531.36 1683.33 1494.53 1632.05 1840.99 2120.24 1957.6 TRUE FALSE 1321.024677 1738.025507 2011.054911 1649.305613 1616.279402 1579.148997 1523.178922 1824.894419 2340.646535 2200.122267 0.600432393 0.789967691 0.914065069 0.749642707 0.734631627 0.717755109 0.69231558 0.829451365 1.063871118 1 11.10336799 -8.130261574 3.829010297 1.030420105 0.750470895 0.688342469 0.076495117 0.143373038 3.536426807 0.061594909 0.020938833 7.41E-09 8.130261574 -0.27994921 ST(ph)PAMMNGQGSTTSSSK ddPTM_A459_MK2206_30min_R2 1 STPAMMNGQGSTTSSSK 17 0 Q6ZN18-2;Q6ZN18;F5GZR7;A0A669KBC9;A0A669KBL4;G5EA50;Q6ZN18-3 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 S(0.123)T(0.877)PAMMNGQGSTTSSSK 190.24 1.74E-07 4101900 12405 14110 14519 16234 12687 12839 20127 14125 12952 16360 TRUE FALSE 13354.73634 13409.31792 15003.05621 14907.63027 12188.84463 13327.59714 17484.30072 15971.186 14078.54155 15826.17454 0.84383856 0.847287377 0.947990064 0.941960436 0.770169987 0.84212373 1.10477113 1.009162761 0.889573252 1 13.95002495 -7.238294993 24.82125984 1.001640362 0.867614461 0.486438452 0.068092238 669.1576167 717640.6536 0.0274957 0.021282925 5.78E-08 7.238294993 -0.134025901 ST(ph)PLSQPSANGVQTEGLDYDR ddPTM_A459_MK2206_30min_R1 1 STPLSQPSANGVQTEGLDYDR 21 0 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6 ENAH Protein enabled homolog 1 S(0.424)T(0.576)PLSQPSANGVQTEGLDYDR 123.42 0.00016821 3020400 1327.9 982.32 790.71 670.55 1378.7 1359.9 1368.6 1123.1 730.14 796.28 TRUE FALSE 1214.955132 918.3707895 737.0388082 722.1958772 1323.78346 1436.896363 1277.303191 1113.280855 806.0406658 894.929178 1.357599195 1.026193817 0.823572218 0.806986625 1.479204715 1.605597849 1.427267344 1.243987661 0.900675367 1 9.805629706 -6.263451654 24.98866016 1.312352581 0.992344402 0.221764197 0.244162306 256.171557 3181164.348 0.079376268 0.094534693 5.45E-07 6.263451654 -0.320008179 ST(ph)QGVTLTDLQEAEK ddPTM_A459_MK2206_30min_R1 2 STQGVTLTDLQEAEK 15 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.171)T(0.829)QGVTLTDLQEAEK;S(0.021)T(0.979)QGVTLTDLQEAEK 183.36 4.71E-05 7713100 2803.5 2812.04 2002.51 1958.03 2665.4 1566.08 2779.15 2477.58 2272.2 2249.8 TRUE FALSE 2565.047603 2628.975685 1866.585201 2108.83781 2559.231474 1654.750096 2593.757974 2455.918779 2508.403321 2528.522209 1.014445352 1.039728137 0.738211906 0.834019888 1.012145143 0.654433681 1.025799957 0.97128622 0.992043223 1 11.30407874 ST(ph)SATDTHHVEMAR ddPTM_A459_MK2206_30min_R2 1 STSATDTHHVEMAR 14 0 H3BQP2;H3BNP3;H3BTL2;H3BS02;O14874-2;O14874-3;O14874 H3BQP2 BCKDK "[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial" 1 S(0.408)T(0.573)S(0.019)ATDTHHVEMAR 125.67 0.0010641 10218000 5745.1 8097.7 6923.4 10298 6402.6 11451 8256.7 6618.1 12949 7795 TRUE FALSE 6184.949273 7695.579993 7154.2227 9456.620458 6151.201754 11886.77583 7172.585372 7483.108393 14075.28061 7540.649788 0.820214364 1.020546002 0.948754139 1.254085619 0.815738952 1.576359619 0.951189297 0.992369173 1.866587232 1 12.88047313 -5.230534966 0.45812482 1.266061543 0.688914346 0.167369893 0.297682214 6.505830929 1.434143217 0.21872422 1.952138632 5.88E-06 5.230534966 -0.577147197 ST(ph)SFRGGMGSGGLATGIAGGLAGMGGIQNEK ddPTM_A459_MK2206_30min_R1 2 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.049)T(0.252)S(0.233)FRGGMGS(0.215)GGLAT(0.252)GIAGGLAGMGGIQNEK;S(0.3)T(0.343)S(0.3)FRGGMGS(0.056)GGLAT(0.001)GIAGGLAGMGGIQNEK 67.073 0.00049777 105806100 2885.23 2008.31 2865.95 2467.12 2605.35 2026.23 1600.36 2074.55 1234.05 467.9 TRUE FALSE 2639.826038 1877.568654 2671.417299 2657.13801 2501.573393 2140.953392 1493.602904 2056.412428 1362.333914 525.8669845 5.019950131 3.570425049 5.080024755 5.052870951 4.757045919 4.071283147 2.840267498 3.910518228 2.590643554 1 9.038554113 -8.380567712 0.523603518 0.951309912 4.744232313 0.800577932 0.564397117 0.416333642 0.285347705 0.648049542 0.323516575 4.16E-09 8.380567712 3.792922401 ST(ph)SPPPSPEVWADSR ddPTM_A459_MK2206_30min_R2 1 STSPPPSPEVWADSR 15 0 Q08495;Q08495-2;E5RGQ0;Q08495-3;E5RFK4;E5RJ61;E5RGQ7;E5RJC0 Q08495 DMTN Dematin 1 S(0.16)T(0.759)S(0.081)PPPSPEVWADSR 128.22 0.0023118 7044200 19741 20568 20982 26094 20236 33436 30848 21804 31264 34540 TRUE FALSE 21252.38614 19546.62303 21681.52941 23962.03673 19441.43296 34708.43041 26797.62054 24653.85766 33983.28621 33412.96263 0.636052133 0.585001194 0.648895749 0.717147922 0.581853013 1.038771413 0.802012705 0.737853088 1.017068932 1 15.02812029 -6.749043238 24.99980665 0.895436523 0.636549682 0.68539444 0.095985013 145.275322 292982.2227 0.031774402 0.031558989 1.78E-07 6.749043238 -0.258886841 ST(ph)SPTFNK ddPTM_A459_MK2206_30min_R2 1 STSPTFNK 8 0 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 S(0.07)T(0.465)S(0.465)PTFNK 120.31 0.017424 34789000 295180 356030 346310 380000 387840 346630 356120 268830 328670 351170 TRUE FALSE 317779.2078 338350.0679 357855.8026 348952.7844 372611.4529 359821.2475 309361.0162 303967.004 357257.1225 339711.3517 0.935438884 0.995992822 1.053411376 1.02720378 1.096847224 1.059197009 0.91065846 0.894780238 1.051649057 1 18.3739499 -7.253721809 24.99515189 0.955503624 1.030805841 0.2220666 0.057376479 807.6680852 2615826.569 0.023071747 0.017541265 5.58E-08 7.253721809 0.075302217 ST(ph)TPPPAEPVSLPQEPPK ddPTM_A459_MK2206_30min_R2 1 STTPPPAEPVSLPQEPPK 18 0 Q9UN86-2;Q9UN86 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.334)T(0.511)T(0.155)PPPAEPVSLPQEPPK 158.14 4.44E-05 46651000 132920 163700 161080 171940 155400 112240 182760 132530 137970 145550 TRUE FALSE 143096.4574 155570.896 166450.3268 157891.952 149298.2152 116511.3719 158763.3925 149852.126 149970.3812 140800.7154 1.016304903 1.104901318 1.18216961 1.121386007 1.060351254 0.827491334 1.127575183 1.06428526 1.065125136 1 17.10329514 -6.520280729 24.99602273 1.018507449 1.10894337 0.208597036 0.081920324 174.5116759 1679031.849 0.027844941 0.028330531 3.02E-07 6.520280729 0.090435921 ST(ph)TPPPAEPVSLPQEPPKPR ddPTM_A459_MK2206_30min_R1 2 STTPPPAEPVSLPQEPPKPR 20 1 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.275)T(0.363)T(0.363)PPPAEPVSLPQEPPKPR;S(0.249)T(0.375)T(0.375)PPPAEPVSLPQEPPKPR 207.1 1.69E-16 801403000 15537.6 17306.5 16201.9 14093.8 14411.6 12921 14677.6 14089.7 14609.9 12831.1 TRUE FALSE 14216.04553 16179.8437 15102.16017 15179.30692 13837.55545 13652.57585 13698.48408 13966.51524 16128.65139 14420.71354 0.985807359 1.121986347 1.04725471 1.052604428 0.95956108 0.946733726 0.949917218 0.968503757 1.118436431 1 13.81585493 -6.242718168 19.96370245 0.984730602 1.056585856 0.219942335 0.055724946 84.41610826 90016.19504 0.016572999 0.021307515 5.72E-07 6.242718168 0.071855254 ST(ph)TTGHLIYK ddPTM_A459_MK2206_30min_R2 1 STTTGHLIYK 10 0 P68104;A0A087WVQ9;Q5VTE0;A0A087WV01;A0A2U3TZH3;Q05639;A6PW80;Q5JR01;A0A2R8Y660;A0A2R8Y488;A0A2R8YDN5 P68104 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha;Elongation factor 1-alpha 2 1 S(0.092)T(0.677)T(0.01)T(0.221)GHLIYK 110.08 0.013123 7098100 80324 102210 76780 104480 93201 106490 118230 98928 78608 80463 TRUE FALSE 86473.6672 97134.40003 79339.80688 95943.64979 89541.46044 110542.5516 102706.259 111858.2293 85445.18175 77837.4989 1.110951256 1.247912657 1.019300568 1.232614757 1.15036405 1.420170909 1.319495878 1.437073786 1.097738018 1 16.24817773 -6.677871984 25 1.286259151 1.154623613 0.099233852 0.139387938 45.40800178 13579.13327 0.043643947 0.043643932 2.10E-07 6.677871984 -0.131635538 ST(ph)VLGLPQHVQK ddPTM_A459_MK2206_30min_R1 1 STVLGLPQHVQK 12 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 S(0.18)T(0.82)VLGLPQHVQK 114.31 0.0075782 14232000 4328.2 5160.8 4451.2 4197.2 4151.2 3946.6 5293.3 4844.1 4401.2 5064.5 TRUE FALSE 3960.063862 4824.830982 4149.064946 4520.469071 3985.848914 4170.053081 4940.193615 4801.748544 4858.72049 5691.928495 0.695733241 0.84766191 0.728938347 0.794189364 0.70026335 0.732625697 0.867929669 0.843606617 0.853615869 1 12.47470182 -8.439400235 0.642927135 0.997580375 0.752930025 0.685846586 0.050657989 0.458722426 0.444760813 0.051214693 0.021807008 3.64E-09 8.439400235 -0.244650351 STAALSGEAASCS(ph)PIIMPYK ddPTM_A459_MK2206_30min_R2 3 STAALSGEAASCSPIIMPYK 20 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 STAALSGEAAS(0.001)CS(0.999)PIIMPYK;STAALSGEAAS(0.003)CS(0.997)PIIMPYK;STAALSGEAAS(0.067)CS(0.932)PIIMPY(0.001)K 214.34 2.21E-17 13104500 225568 190645 178710 207255 204769 192908 199225 156718.2 146067.4 205713 TRUE FALSE 242837.6595 181177.8465 184668.1022 190321.6035 196728.7402 200249.2491 173066.5182 177201.8068 158772.0784 199000.6017 1.220286057 0.910438687 0.927977607 0.956387076 0.988583645 1.006274591 0.869678367 0.890458649 0.797847228 1 17.60241327 -7.262722954 24.80634005 0.880367611 0.991510456 0.254303753 0.092598672 151.5531742 2928872.521 0.036459857 0.026121404 5.46E-08 7.262722954 0.111142846 STADS(ph)GGEGLETAPK ddPTM_A459_MK2206_30min_R1 1 STADSGGEGLETAPK 15 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 STADS(1)GGEGLETAPK 182.37 2.06E-05 3511200 1617 1529.5 1542.6 1268.5 1515.7 1237.4 1276.7 1200.3 1577.3 1411.2 TRUE FALSE 1479.465659 1429.929272 1437.89261 1366.20009 1455.326459 1307.460519 1191.533672 1189.805904 1741.265979 1586.03011 0.932810575 0.901577633 0.906598558 0.861396061 0.917590688 0.824360465 0.751268002 0.750178635 1.097877 1 10.63120444 -8.272180916 24.97007568 1.048938522 0.856671108 0.585253657 0.065057278 611.7677983 1422116.588 0.066355399 0.017846729 5.34E-09 8.272180916 -0.192267415 STADS(ph)GGEGLETAPK ddPTM_A459_MK2206_30min_R2 1 STADSGGEGLETAPK 15 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 S(0.028)T(0.028)ADS(0.944)GGEGLETAPK 75.02 0.039471 9920100 17706 22727 22475 23310 23494 17262 21710 19139 20447 22198 TRUE FALSE 19061.58497 21598.41023 23224.30528 21405.49844 22571.50751 17918.91751 18859.45092 21640.53301 22225.4431 21473.68108 0.887671979 1.005808466 1.081524178 0.996824827 1.051124278 0.834459515 0.878258872 1.007770067 1.035008531 1 14.3902819 -4.753855963 24.76445184 0.985071812 0.887671782 0.1481157 0.071804553 556.9655523 1818659.477 0.019624461 0.200339671 1.76E-05 4.753855963 -0.09740003 STAGDTHLGGEDFDNR ddPTM_A459_MK2206_30min_R1 10 STAGDTHLGGEDFDNR 16 0 P11142;E9PKE3;P11142-2;E9PN89;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ;;;;;;;;; 260.5 4.55E-93 482003100 44602.9 59039.2 51278.3 50090.1 44804 38863.4 46243 45412.7 47493 42385.9 FALSE TRUE 40809.18914 55195.73735 47797.67187 53948.04818 43019.36181 41063.81212 43158.21385 45015.66155 52430.06731 47636.98529 0.856670272 1.158674022 1.003373147 1.132482416 0.903066421 0.862015341 0.905981216 0.94497293 1.100616821 1 15.53979449 -4.479837892 16.55096377 0.994141631 0.147862733 0.163955393 0.096750948 2343425.762 25654201.47 0.025585015 61501277.07 3.31E-05 4.479837892 -0.846278899 STAGDTHLGGEDFDNR ddPTM_A459_MK2206_30min_R2 8 STAGDTHLGGEDFDNR 16 0 P11142;E9PKE3;P11142-2;E9PN89;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ;;;;;;; 265.77 7.56E-39 707295900 983121 1308024 1091963 1399752 1341409 1445795 1399199 1071690 1202287 1208376 FALSE TRUE 1058389.5 1243069.43 1128368.501 1285387.784 1288738.543 1500815.742 1215482.491 1211763.563 1306859.75 1168946.79 0.905421452 1.063409764 0.965286454 1.099611886 1.102478362 1.283904241 1.039809939 1.036628504 1.117980528 1 20.15677783 -4.850794496 0.906306546 1.102097725 0.850615456 0.297721279 0.081369146 2.630386708 1.818408853 0.029734018 0.643384437 1.41E-05 4.850794496 -0.251482269 STAPSAAASASASAAAS(ph)SPAGGGAEALELLEHCGVCR ddPTM_A459_MK2206_30min_R1 2 STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR 37 0 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 STAPSAAASASASAAAS(0.5)S(0.5)PAGGGAEALELLEHCGVCR;STAPSAAAS(0.002)AS(0.012)AS(0.146)AAAS(0.42)S(0.42)PAGGGAEALELLEHCGVCR 142.07 2.67E-35 134264000 7195.6 6580.1 6498.4 6027.6 7475.4 7407.7 7036.6 6932.2 5806.5 5447.7 TRUE FALSE 6583.576434 6151.734294 6057.306714 6491.846796 7177.638989 7827.117572 6567.201253 6871.592506 6410.106454 6122.602204 1.075290573 1.004758122 0.989335337 1.060308441 1.172318362 1.278397209 1.072616027 1.122332021 1.046957852 1 12.57992924 -6.044211166 5.648760427 1.127135265 1.021482229 0.233954139 0.073989665 0.260058479 20.85219402 0.022475043 0.030040843 9.03E-07 6.044211166 -0.105653037 STAPSAAASASASAAAS(ph)SPAGGGAEALELLEHCGVCR ddPTM_A459_MK2206_30min_R2 13 STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR 37 0 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 STAPSAAASASASAAAS(0.564)S(0.436)PAGGGAEALELLEHCGVCR;STAPSAAAS(0.042)AS(0.035)AS(0.15)AAAS(0.386)S(0.386)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.5)S(0.5)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.5)S(0.5)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.5)S(0.5)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.561)S(0.439)PAGGGAEALELLEHCGVCR;STAPSAAASASAS(0.002)AAAS(0.499)S(0.499)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.5)S(0.5)PAGGGAEALELLEHCGVCR;STAPSAAASAS(0.001)AS(0.005)AAAS(0.497)S(0.497)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.5)S(0.5)PAGGGAEALELLEHCGVCR;STAPSAAAS(0.002)AS(0.002)AS(0.019)AAAS(0.788)S(0.189)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.549)S(0.451)PAGGGAEALELLEHCGVCR;STAPSAAAS(0.001)AS(0.005)AS(0.047)AAAS(0.473)S(0.473)PAGGGAEALELLEHCGVCR 169.63 3.61E-44 1020052500 231482.7 299183.2 262091.8 322483.9 288110.7 304242.3 301846.2 240272 276427.8 296149.3 TRUE FALSE 249205.1935 284326.1973 270829.8098 296135.9338 276798.0263 315820.4539 262213.4314 271676.3754 300470.9904 286485.9726 0.869868745 0.992461148 0.945351032 1.033683887 0.966183523 1.102394128 0.91527494 0.94830603 1.048815716 1 18.12810498 -3.922146376 1.408358594 0.99573681 4.44E-09 0.3297171 0.052942909 14.58318743 4.154083417 0.014722145 36.50898025 0.000119634 3.922146376 -0.995736806 STAPSAAASASASAAASS(ph)PAGGGAEALELLEHCGVCR ddPTM_A459_MK2206_30min_R1 11 STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR 37 0 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 STAPSAAASASASAAAS(0.212)S(0.788)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.216)S(0.784)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.201)S(0.799)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.223)S(0.776)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.04)S(0.96)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.177)S(0.823)PAGGGAEALELLEHCGVCR;STAPSAAASASAS(0.001)AAAS(0.2)S(0.799)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.215)S(0.785)PAGGGAEALELLEHCGVCR;STAPSAAASAS(0.001)AS(0.006)AAAS(0.219)S(0.774)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.174)S(0.826)PAGGGAEALELLEHCGVCR;STAPSAAAS(0.001)AS(0.003)ASAAAS(0.224)S(0.772)PAGGGAEALELLEHCGVCR 243.05 9.03E-96 2856746400 18598.773 18096.441 17562.235 15256.48 19271.54 17681.4 18955.99 16210.33 14810.504 13793.48 TRUE FALSE 17016.84969 16918.3594 16370.15942 16431.53673 18503.91375 18682.50559 17691.47049 16068.60479 16350.10889 15502.32044 1.097696939 1.091343678 1.055981231 1.059940465 1.193622195 1.205142524 1.141214347 1.036529006 1.054687842 1 13.92019656 -10.94851336 5.797121942 0.999950552 1.105654357 0.23798739 0.055769117 4.03E-05 4.00E-06 0.061091771 0.014810005 1.13E-11 10.94851336 0.105703805 STAPSAAASASASAAASS(ph)PAGGGAEALELLEHCGVCR ddPTM_A459_MK2206_30min_R2 9 STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR 37 0 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 STAPSAAASASASAAAS(0.211)S(0.789)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.196)S(0.804)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.189)S(0.811)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.205)S(0.795)PAGGGAEALELLEHCGVCR;STAPSAAAS(0.001)AS(0.002)AS(0.003)AAAS(0.217)S(0.777)PAGGGAEALELLEHCGVCR;STAPSAAASASAS(0.001)AAAS(0.215)S(0.783)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.059)S(0.941)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.21)S(0.79)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.161)S(0.839)PAGGGAEALELLEHCGVCR 202.16 1.03E-68 646595800 143062.1 210320.9 156135 210422.5 186942.6 223404.6 210396.2 163251.1 169536.9 187946.9 TRUE FALSE 154015.0444 199876.6699 161340.463 193230.3086 179602.2942 231906.4186 182770.9262 184588.5793 184282.9131 181814.208 0.847101258 1.099345712 0.887391941 1.062789926 0.987834208 1.27551318 1.005262065 1.015259375 1.013578175 1 17.47210542 -4.750280279 24.83977478 1.039842949 0.847100805 0.268940127 0.09467382 635.9992892 1415613.92 0.023528984 0.348863051 1.78E-05 4.750280279 -0.192742144 STAQQELDGKPAS(ph)PTPVIVASHTANK ddPTM_A459_MK2206_30min_R1 1 STAQQELDGKPASPTPVIVASHTANK 26 1 P35606;P35606-2;H0YAC7 P35606 COPB2 Coatomer subunit beta 1 S(0.001)T(0.001)AQQELDGKPAS(0.655)PT(0.344)PVIVASHTANK 93.34 6.21E-06 143810000 3183.3 3289.8 3164.2 2208.1 2416.4 2397.8 2695.9 2631.2 4195.4 4839.8 TRUE FALSE 2912.543619 3075.633422 2949.42292 2378.168245 2320.149671 2533.561364 2516.06143 2608.195696 4631.526843 5439.390963 0.535453995 0.565437095 0.542234037 0.437212229 0.426545855 0.465780339 0.462563079 0.479501421 0.851478939 1 12.40922941 -8.374418338 3.183446627 0.993930253 0.486704201 0.938768757 0.045255753 0.059192556 1.084749504 0.049908936 0.013456412 4.22E-09 8.374418338 -0.507226052 STAQQELDGKPAS(ph)PTPVIVASHTANK ddPTM_A459_MK2206_30min_R2 3 STAQQELDGKPASPTPVIVASHTANK 26 1 P35606;P35606-2;H0YAC7 P35606 COPB2 Coatomer subunit beta 1 STAQQELDGKPAS(0.535)PT(0.465)PVIVASHTANK;STAQQELDGKPAS(0.945)PT(0.055)PVIVASHTANK;S(0.006)T(0.006)AQQELDGKPAS(0.492)PT(0.492)PVIVAS(0.003)HT(0.001)ANK 96.317 2.07E-06 741920000 306892 210952 234172 213228 187723 162280.7 265664 193912.3 136895.7 268268 TRUE FALSE 330387.8875 200476.4304 241979.1776 195806.5903 180352.0518 168456.4058 230781.9977 219257.3034 148802.6405 259514.4371 1.273100222 0.772505887 0.932430505 0.754511358 0.694959609 0.649121519 0.88928385 0.844875167 0.57338868 1 17.98545527 -2.7309025 1.452328807 0.775027346 200 0.554487659 0.127443139 414.5240917 2.873557278 0.03479693 273221.1846 0.001858222 2.7309025 199.2249727 STAQQELDGKPAS(ph)PTPVIVASHTANKEEK ddPTM_A459_MK2206_30min_R1 4 STAQQELDGKPASPTPVIVASHTANKEEK 29 2 P35606;P35606-2;H0YAC7 P35606 COPB2 Coatomer subunit beta 1 STAQQELDGKPAS(0.5)PT(0.5)PVIVASHTANKEEK;S(0.002)T(0.002)AQQELDGKPAS(0.692)PT(0.303)PVIVAS(0.001)HTANKEEK;STAQQELDGKPAS(0.499)PT(0.499)PVIVAS(0.002)HTANKEEK;STAQQELDGKPAS(0.5)PT(0.5)PVIVASHTANKEEK 94.73 8.09E-08 610733000 18215 20800 21895.5 19861.8 14818.1 13174.53 15275.3 18301.5 18417.6 16663.2 TRUE FALSE 16665.7186 19445.91622 20409.29446 21391.55928 14227.8637 13920.4605 14256.31261 18141.49192 20332.17543 18727.56302 0.889903218 1.038358072 1.089799802 1.142250023 0.759728518 0.743314039 0.761247611 0.968705426 1.085681859 1 14.19287556 -6.258810453 24.99985573 0.871464972 1.043506513 0.271261442 0.121834004 319.3331637 3036708.13 0.039821659 0.049051925 5.51E-07 6.258810453 0.172041541 STAQQELDGKPAS(ph)PTPVIVASHTANKEEK ddPTM_A459_MK2206_30min_R2 4 STAQQELDGKPASPTPVIVASHTANKEEK 29 2 P35606;P35606-2;H0YAC7 P35606 COPB2 Coatomer subunit beta 1 STAQQELDGKPAS(0.5)PT(0.5)PVIVASHTANKEEK;STAQQELDGKPAS(0.499)PT(0.499)PVIVAS(0.001)HTANKEEK;STAQQELDGKPAS(0.808)PT(0.19)PVIVAS(0.001)HTANKEEK;STAQQELDGKPAS(0.499)PT(0.499)PVIVAS(0.001)HTANKEEK 96.133 6.93E-08 1482570000 429801 513532 468931 441347 457397 318289 547820 404866 366830 519164 TRUE FALSE 462706.895 488030.7476 484564.9255 405287.5383 439437.2955 330401.7109 475890.576 457783.3763 398736.2103 502223.7212 0.921316289 0.971739739 0.964838786 0.806986053 0.874983154 0.657877549 0.947566903 0.911512852 0.793941412 1 18.93797065 -5.750751971 24.95131311 0.848772676 0.954542453 0.193393227 0.089416223 315.4822456 736532.1716 0.023965334 0.040967192 1.78E-06 5.750751971 0.105769777 STAQQELDGKPASPT(ph)PVIVASHTANK ddPTM_A459_MK2206_30min_R1 1 STAQQELDGKPASPTPVIVASHTANK 26 1 P35606;P35606-2;H0YAC7 P35606 COPB2 Coatomer subunit beta 1 S(0.001)T(0.001)AQQELDGKPAS(0.466)PT(0.527)PVIVAS(0.003)HT(0.001)ANK 52.158 0.012607 114120000 5706.3 6405.8 6337.5 5363.7 4028.7 4329.1 5426.7 4648.5 7761.8 9286.3 TRUE FALSE 5220.94922 5988.781256 5907.328157 5776.813103 3868.228348 4574.209901 5064.694745 4607.858655 8568.666886 10436.75695 0.500246316 0.5738163 0.566011854 0.553506528 0.37063509 0.438278856 0.485274762 0.441502919 0.821008569 1 13.34938587 -8.427847327 3.379994049 0.995742792 0.492634032 0.88459571 0.062048133 0.075426561 1.605670741 0.066770229 0.017749218 3.73E-09 8.427847327 -0.50310876 STAQQELDGKPASPT(ph)PVIVASHTANK ddPTM_A459_MK2206_30min_R2 1 STAQQELDGKPASPTPVIVASHTANK 26 1 P35606;P35606-2;H0YAC7 P35606 COPB2 Coatomer subunit beta 1 STAQQELDGKPAS(0.368)PT(0.632)PVIVASHTANK 130.45 3.41E-09 179710000 238140 154800 184640 167720 155010 95068 211260 158450 113000 237890 TRUE FALSE 256372.1815 147112.8571 190795.8054 154016.7395 148923.5285 98685.87936 183521.3082 179159.959 122828.5357 230127.6688 1.114043274 0.639266273 0.829086769 0.6692665 0.64713439 0.428831004 0.797476067 0.778524199 0.533740842 1 17.81207493 -4.757136359 24.95052195 0.69125927 1.114043914 0.394553499 0.152325008 123.9611632 718678.1377 0.036417237 0.276848433 1.75E-05 4.757136359 0.422784644 STAQQELDGKPASPT(ph)PVIVASHTANKEEK ddPTM_A459_MK2206_30min_R2 1 STAQQELDGKPASPTPVIVASHTANKEEK 29 2 P35606;P35606-2;H0YAC7 P35606 COPB2 Coatomer subunit beta 1 STAQQELDGKPAS(0.183)PT(0.817)PVIVASHTANKEEK 103.59 2.43E-08 69447000 114230 141590 141290 116960 142340 89942 144090 121230 109760 141030 TRUE FALSE 122975.5366 134558.8465 146000.5381 107403.9939 136751.0164 93364.80584 125170.8099 137075.1772 119306.7264 136428.2026 0.901393805 0.986297876 1.070163905 0.787256533 1.00236618 0.684351212 0.917484856 1.004742235 0.874501929 1 17.05778239 -5.753452814 24.99997048 0.892543886 0.985986428 0.138327692 0.102866564 354.9084945 1110940.798 0.02769902 0.046902836 1.76E-06 5.753452814 0.093442542 STAYEDYYYHPPPR ddPTM_A459_MK2206_30min_R2 1 STAYEDYYYHPPPR 14 0 O43390;B4DT28;O43390-4;O43390-3;O43390-2;A0A286YEZ8 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R 0 101.61 0.020245 0 10275 15215 13252 16055 15871 17395 17813 12499 14151 13253 FALSE TRUE 11061.6619 14459.44522 13693.81507 14743.25514 15247.82479 18056.97891 15474.1317 14132.66222 15381.8284 12820.5557 0.862806743 1.127832956 1.068114003 1.149970055 1.189326357 1.408439645 1.206978236 1.102343966 1.199778603 1 13.64617118 -4.022241786 0.914789354 1.191903096 5.13E-15 0.434512717 0.102311706 6.985222031 1.684920353 0.035150353 11.5638993 9.50E-05 4.022241786 -1.191903096 STCS(ph)CPDLQPNGQDLGENSR ddPTM_A459_MK2206_30min_R2 2 STCSCPDLQPNGQDLGENSR 20 0 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 S(0.001)T(0.001)CS(0.998)CPDLQPNGQDLGENSR;S(0.005)T(0.006)CS(0.989)CPDLQPNGQDLGENSR 141.18 6.11E-05 10263300 18889.9 27424 22054 24994 30010 30744 29959 24150 29215 30634 TRUE FALSE 20336.12527 26062.16404 22789.26935 22951.91025 28831.65661 31913.98446 26025.34731 27306.48792 31756.06789 29634.41509 0.686233395 0.879455996 0.769013638 0.774501882 0.972911276 1.076923043 0.878213632 0.921445145 1.071594219 1 14.85498596 -6.271371004 8.596321499 0.982146974 0.783904228 0.673900024 0.071308459 0.10792265 71.92459723 0.021792536 0.025745647 5.35E-07 6.271371004 -0.198242746 STDS(ph)PIIIEPLSKPDYR ddPTM_A459_MK2206_30min_R1 2 STDSPIIIEPLSKPDYR 17 1 A0A0D9SEJ8;Q86YH2 A0A0D9SEJ8 ZNF280B Zinc finger protein 280B 1 S(0.053)T(0.053)DS(0.894)PIIIEPLSKPDYR;S(0.141)T(0.141)DS(0.718)PIIIEPLSKPDYR 135.81 0.00028353 28480000 4224.3 4206.1 4225.8 4031.9 4557.5 4421.2 4697 4600.3 4197.2 3589 TRUE FALSE 3865.001102 3932.282126 3938.96447 4342.437637 4375.965124 4671.524523 4383.6717 4560.080062 4633.51396 4033.632416 0.958193684 0.974873692 0.976530349 1.076557601 1.084869585 1.158143341 1.086780165 1.130514532 1.148719933 1 11.9778639 -5.839049598 2.155988759 1.110367205 0.964224825 0.659820523 0.042164247 0.168225384 1.595318812 0.012223441 0.021842872 1.45E-06 5.839049598 -0.14614238 STDS(ph)PIIIEPLSKPDYR ddPTM_A459_MK2206_30min_R2 1 STDSPIIIEPLSKPDYR 17 1 A0A0D9SEJ8;Q86YH2 A0A0D9SEJ8 ZNF280B Zinc finger protein 280B 1 S(0.075)T(0.075)DS(0.849)PIIIEPLSKPDYR 65.521 0.023785 1866900 6940.3 8369.2 6365.5 9222.9 9355 8916.3 9248.8 6298.6 6323.4 9582.3 TRUE FALSE 7471.654704 7953.597698 6577.722593 8469.359567 8987.675695 9255.616044 8034.42145 7121.848646 6873.397902 9269.630336 0.806035886 0.858027495 0.709599235 0.913667456 0.969582968 0.99848815 0.866746694 0.7682991 0.741496441 1 13.17829609 -5.79185966 24.99940054 0.890748329 0.797901391 0.216447694 0.089223663 365.28048 300186.2073 0.02766042 0.041032678 1.61E-06 5.79185966 -0.092846937 STDS(ph)PVPGSEDDLVAGATLHSPEWSEER ddPTM_A459_MK2206_30min_R1 4 STDSPVPGSEDDLVAGATLHSPEWSEER 28 0 Q9H694;Q9H694-2 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(0.141)T(0.141)DS(0.7)PVPGS(0.017)EDDLVAGATLHSPEWSEER;S(0.233)T(0.233)DS(0.497)PVPGS(0.037)EDDLVAGATLHSPEWSEER;S(0.209)T(0.209)DS(0.58)PVPGS(0.001)EDDLVAGATLHSPEWSEER;S(0.151)T(0.151)DS(0.457)PVPGS(0.242)EDDLVAGATLHSPEWSEER 153.37 7.54E-15 150341700 6836.29 6349.07 6254.39 5441.2 7317.52 6485.55 7538.59 6509.35 5778.11 5490.88 TRUE FALSE 6254.827637 5935.744389 5829.859433 5860.282167 7026.047683 6852.756236 7035.704416 6452.439439 6378.765212 6171.131668 1.013562499 0.961856708 0.944698598 0.949628444 1.138534723 1.110453739 1.140099546 1.045584471 1.033645943 1 12.59131936 -6.250097565 24.97803059 1.085054651 0.965413854 0.580707463 0.045803348 511.2016103 1125816.371 0.01400629 0.017924053 5.62E-07 6.250097565 -0.119640797 STDS(ph)PVPGSEDDLVAGATLHSPEWSEER ddPTM_A459_MK2206_30min_R2 3 STDSPVPGSEDDLVAGATLHSPEWSEER 28 0 Q9H694;Q9H694-2 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(0.078)T(0.078)DS(0.83)PVPGS(0.015)EDDLVAGATLHSPEWSEER;S(0.224)T(0.224)DS(0.545)PVPGS(0.007)EDDLVAGATLHSPEWSEER;S(0.061)T(0.061)DS(0.747)PVPGS(0.13)EDDLVAGATLHSPEWSEER 99.997 4.56E-07 25660300 105289 126998 112919 144866 131018 149020 119379 108516 121886 122336 TRUE FALSE 113350.0068 120691.464 116683.6631 133029.9844 125873.575 154691.0605 103704.3939 122699.4138 132487.424 118344.1863 0.957799536 1.01983433 0.985968696 1.124093954 1.063622801 1.307128515 0.87629479 1.036801364 1.119509357 1 16.85262931 -5.743098689 24.50138886 1.077758324 0.991064142 0.130113969 0.10342739 422.9983182 565078.7498 0.028248982 0.048800111 1.81E-06 5.743098689 -0.086694182 STDSEVSQS(ph)PAK ddPTM_A459_MK2206_30min_R1 4 STDSEVSQSPAK 12 0 A0A0G2JNJ7;H7C148;H7C3F5;A0A2H2FJL5;B7Z6J7;O75175 A0A0G2JNJ7 CNOT3 CCR4-NOT transcription complex subunit 3 1 STDSEVSQS(1)PAK;STDSEVS(0.001)QS(0.999)PAK;STDSEVS(0.003)QS(0.997)PAK;STDSEVS(0.001)QS(0.999)PAK 250.05 2.22E-18 451244000 31140 33843.4 34178.3 28655.1 24993.7 21255.3 26905.5 27636.9 26961.2 26240.8 TRUE FALSE 28491.37948 31640.18851 31858.37222 30862.12077 23998.148 22458.75672 25110.68319 27395.2735 29763.91322 29491.70841 0.966081011 1.07285031 1.080248447 1.046467717 0.813725257 0.76152783 0.851448917 0.92891443 1.009229876 1 14.84802178 -6.245438909 23.87347929 0.881821509 1.046431549 0.456599016 0.077938888 405.3696868 604830.2386 0.024666233 0.031722648 5.68E-07 6.245438909 0.16461004 STDSEVSQS(ph)PAK ddPTM_A459_MK2206_30min_R2 4 STDSEVSQSPAK 12 0 A0A0G2JNJ7;H7C148;H7C3F5;A0A2H2FJL5;B7Z6J7;O75175 A0A0G2JNJ7 CNOT3 CCR4-NOT transcription complex subunit 3 1 STDSEVS(0.001)QS(0.999)PAK;STDSEVS(0.006)QS(0.994)PAK;STDSEVSQS(1)PAK;STDSEVS(0.011)QS(0.989)PAK 186.29 0.00010379 465294000 240738 245173 230968 214163 252488 185342 281516 219747 190180 258371 TRUE FALSE 259169.0864 232998.0653 238668.3578 196665.1978 242574.0525 192395.3197 244552.611 248468.6874 206721.5126 249940.3754 1.03692365 0.932214593 0.954901174 0.786848453 0.970527679 0.769764866 0.978443801 0.994111844 0.827083308 1 17.93122445 -4.585200361 1.654802693 0.90510592 1.139601915 0.17542126 0.082015198 2.936305352 5.310872647 0.021826616 1.285710768 2.60E-05 4.585200361 0.234495995 STDSPVPGS(ph)EDDLVAGATLHSPEWSEER ddPTM_A459_MK2206_30min_R2 1 STDSPVPGSEDDLVAGATLHSPEWSEER 28 0 Q9H694;Q9H694-2 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(0.015)T(0.015)DS(0.091)PVPGS(0.879)EDDLVAGATLHSPEWSEER 76.818 6.04E-05 20897000 51501 64408 60138 71320 72330 74162 79114 55377 66921 65791 TRUE FALSE 55443.95616 61209.59238 62142.9709 65492.92786 69489.96077 76984.28688 68726.23677 62614.96404 72741.66761 63644.24506 0.871154275 0.96174591 0.97641147 1.029047132 1.091849871 1.209603269 1.07984998 0.983827587 1.142941794 1 15.95774245 -5.542358605 1.290470635 1.088293847 0.894592625 0.539098704 0.063288047 0.433550738 1.315987675 0.021753265 0.077053031 2.87E-06 5.542358605 -0.193701222 STDSPVPGSEDDLVAGAT(ph)LHSPEWSEER ddPTM_A459_MK2206_30min_R1 1 STDSPVPGSEDDLVAGATLHSPEWSEER 28 0 Q9H694;Q9H694-2 Q9H694 BICC1 Protein bicaudal C homolog 1 1 STDSPVPGS(0.03)EDDLVAGAT(0.967)LHS(0.002)PEWSEER 103.75 1.59E-07 3391300 622.72 613.79 586.37 593 623.56 534.38 766.42 473.02 594.53 428.27 TRUE FALSE 569.754394 573.8321594 546.5688381 638.6729627 598.7222848 564.6361338 715.2935202 468.884436 656.333521 481.3273209 1.183715051 1.192186968 1.135545012 1.326899461 1.243898401 1.173081413 1.486085433 0.974148808 1.36359083 1 8.910874505 -10.67096333 4.198504394 0.999950488 1.228508812 0.215886129 0.132003659 87843598.03 75326520.36 59514.95364 0.03066667 2.13E-11 10.67096333 0.228558324 STDSSS(ph)VSGSLQQETK ddPTM_A459_MK2206_30min_R2 2 STDSSSVSGSLQQETK 16 0 Q9H8G2;A0A3B3ISJ3 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 STDS(0.036)S(0.021)S(0.942)VSGSLQQETK;STDSS(0.348)S(0.649)VS(0.003)GSLQQETK 260.07 4.53E-39 9367400 45885 52070 49473 54289 53602 46992 50656 37705 40596 46621 TRUE FALSE 49397.99088 49484.27952 51122.40513 49853.41504 51497.31615 48780.31349 44004.80635 42633.17296 44126.9667 45099.76059 1.095304947 1.097218231 1.133540499 1.105403097 1.141853426 1.081609145 0.975721507 0.945308188 0.978430176 1 15.46083215 -7.198073498 3.445854076 0.968699495 1.114021274 0.924332449 0.018972542 0.058427338 1.378996056 0.007791442 0.005689336 6.34E-08 7.198073498 0.145321779 STEDLS(ph)PQK ddPTM_A459_MK2206_30min_R2 1 STEDLSPQK 9 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 STEDLS(1)PQK 112.94 0.0094044 22659000 135110 90382 99294 103550 104930 102340 167570 97986 133840 138900 TRUE FALSE 145454.1255 85893.76131 102604.4124 95089.63376 100809.921 106234.6204 145567.8577 110793.1066 145481.1613 134367.7044 1.082508079 0.639244093 0.763609179 0.707682208 0.750254099 0.790626147 1.083354504 0.824551607 1.082709286 1 17.0358269 -7.181803913 7.472251115 0.982664309 0.774697114 0.38463083 0.128033018 0.293091465 24.32384358 0.046795624 0.036174529 6.58E-08 7.181803913 -0.207967195 STELKTEIKEEEDQPSTSATQS(ph)SPAPGQSK ddPTM_A459_MK2206_30min_R1 1 STELKTEIKEEEDQPSTSATQSSPAPGQSK 30 2 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 STELKTEIKEEEDQPS(0.005)T(0.02)S(0.02)AT(0.025)QS(0.464)S(0.464)PAPGQSK 65.801 0.00019283 10778000 1173.6 1528.2 1344 1300.3 963.51 770.45 935.87 1226.5 654.87 500.93 TRUE FALSE 1073.779157 1428.713902 1252.773025 1400.449331 925.1313564 814.0722132 873.4398199 1215.77684 722.94608 562.9889902 1.907282693 2.537729737 2.225217627 2.487525255 1.643249464 1.445982474 1.551433216 2.159503757 1.284121168 1 9.136962899 -6.320642277 6.30775048 1.566119557 2.301853431 0.582660605 0.319792383 0.170092426 14.29173343 0.096159764 0.109769753 4.78E-07 6.320642277 0.735733873 STELKTEIKEEEDQPSTSATQS(ph)SPAPGQSK ddPTM_A459_MK2206_30min_R2 1 STELKTEIKEEEDQPSTSATQSSPAPGQSK 30 2 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 ST(0.001)ELKT(0.001)EIKEEEDQPS(0.017)T(0.05)S(0.05)AT(0.163)QS(0.357)S(0.357)PAPGQS(0.003)K 46.145 0.013928 9599300 25849 68088 54022 56098 72913 37863 74560 35832 61473 55571 TRUE FALSE 27828.01931 64706.84893 55823.06652 51514.61395 70050.06926 39303.903 64770.18244 40515.36543 66819.81042 53757.72282 0.517656215 1.203675408 1.038419479 0.958273737 1.303069877 0.731130355 1.204853536 0.753665954 1.242980672 1 15.71418441 -4.750226474 24.99930905 1.040550621 0.517655084 0.419603093 0.187072612 465.7526655 1038335.113 0.042409499 0.639405873 1.78E-05 4.750226474 -0.522895537 STELVLS(ph)PDMPR ddPTM_A459_MK2206_30min_R1 1 STELVLSPDMPR 12 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 ST(0.001)ELVLS(0.999)PDMPR 81.565 0.037996 4602500 1865.2 2073 2105.6 1623.2 2260.8 1742.8 2268.1 1834.5 1851.4 1705.2 TRUE FALSE 1706.554945 1938.047323 1962.677739 1748.219145 2170.747549 1841.47583 2116.799187 1818.46116 2043.859655 1916.45305 0.890475739 1.011267833 1.024119917 0.912216005 1.132690179 0.96087709 1.104540071 0.948868098 1.066480421 1 10.90422294 -3.978726931 1.534847233 1.020017217 2.81E-12 0.251749442 0.065447254 15.57611718 5.34013592 0.016862322 43.36048531 0.00010502 3.978726931 -1.020017217 STES(ph)DVKADGDSK ddPTM_A459_MK2206_30min_R2 2 STESDVKADGDSK 13 1 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2;Q9Y4W2-4 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 S(0.164)T(0.164)ES(0.672)DVKADGDSK;STES(1)DVKADGDSK 160.04 0.00014 6340800 32604 37739 36386 32695 34873 25925 41710 29597 25218.3 42114 TRUE FALSE 35100.18731 35864.93614 37599.09108 30023.71391 33503.7108 26911.59404 36233.4269 33465.42952 27411.74215 40739.82363 0.861569447 0.880340977 0.922907557 0.736962295 0.822382323 0.660572178 0.889385954 0.821442671 0.672848817 1 15.31415211 -5.754265467 24.99715107 0.791856909 0.887479497 0.146674093 0.095410722 284.9578062 992909.5662 0.024660573 0.04159305 1.76E-06 5.754265467 0.095622588 STETSDFENIES(ph)PLNER ddPTM_A459_MK2206_30min_R1 1 STETSDFENIESPLNER 17 0 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 STETSDFENIES(1)PLNER 314.61 1.57E-103 26560000 1229 1448.5 1480.9 857.11 1327.2 1072.7 1466.8 1076.9 891.95 982.19 TRUE FALSE 1124.467096 1354.202387 1380.380634 923.1247607 1274.334814 1133.435347 1368.952448 1067.484777 984.6713944 1103.871112 1.018657961 1.226775818 1.250490767 0.836261363 1.154423555 1.026782325 1.240137941 0.967037515 0.892016634 1 10.10835602 -7.937209819 11.46763429 0.940517351 1.105917365 0.253664541 0.121802489 0.774088263 138.433634 0.066160887 0.031762172 1.16E-08 7.937209819 0.165400014 STETSDFENIES(ph)PLNER ddPTM_A459_MK2206_30min_R2 2 STETSDFENIESPLNER 17 0 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 STETSDFENIES(1)PLNER;STETSDFENIES(1)PLNER 225.17 9.51E-13 25428000 42486 49228 46034 52048 52718 50985 50704 41227 44493 50452 TRUE FALSE 45738.76083 46783.4091 47568.75058 47795.51191 50648.02643 52925.2699 44046.50389 46615.51045 48362.92072 48805.75537 0.937159162 0.958563365 0.97465453 0.979300731 1.037747004 1.084406327 0.902485856 0.955123225 0.990926589 1 15.57476367 -5.256308424 1.662276466 0.992553378 0.938702697 0.143580877 0.045018617 1.090671952 5.060741516 0.014421063 0.069465384 5.54E-06 5.256308424 -0.053850681 STFAGS(ph)PER ddPTM_A459_MK2206_30min_R1 2 STFAGSPER 9 0 Q2TBE0;H0YE03;H7C3G7;Q2TBE0-3;Q2TBE0-2 Q2TBE0 CWF19L2 CWF19-like protein 2 1 ST(0.005)FAGS(0.995)PER;S(0.001)T(0.006)FAGS(0.994)PER 93.442 0.024562 38081000 7854.7 8109.1 7655.7 6370.6 7308.7 6665.8 8642.6 6739.4 8388.7 8982.4 TRUE FALSE 7186.616518 7581.196116 7136.052414 6861.264716 7017.579003 7043.211836 8066.067923 6680.478136 9260.735384 10095.20753 0.711883981 0.750969814 0.706875257 0.679655638 0.695139648 0.697678757 0.798999714 0.66174748 0.917339773 1 13.30138295 -8.407645344 3.948255992 0.99709948 0.714895631 0.876366207 0.037419296 0.067009419 1.705006545 0.035422653 0.009331875 3.91E-09 8.407645344 -0.282203849 STFAGS(ph)PER ddPTM_A459_MK2206_30min_R2 1 STFAGSPER 9 0 Q2TBE0;H0YE03;H7C3G7;Q2TBE0-3;Q2TBE0-2 Q2TBE0 CWF19L2 CWF19-like protein 2 1 ST(0.001)FAGS(0.999)PER 97.597 0.02045 34905000 90978 81367 95024 84283 75577 67555 90661 69215 64743 81216 TRUE FALSE 97943.34563 77326.4331 98192.05273 77396.80929 72609.46724 70125.85286 78757.1018 78261.63815 70374.22911 78565.92857 1.246638936 0.984223499 1.249804521 0.985119258 0.924185185 0.892573335 1.002433284 0.996126942 0.895734708 1 16.26161618 -5.90002916 6.971150157 0.951577316 1.141695317 0.58412605 0.078653699 0.155619631 9.435298833 0.02099346 0.031333202 1.26E-06 5.90002916 0.190118001 STFETEHAGQR ddPTM_A459_MK2206_30min_R1 1 STFETEHAGQR 11 0 H0YIQ2;P49750-3;P49750-1;P49750;F8VU51;H0YI23 H0YIQ2 YLPM1 YLP motif-containing protein 1 0 120.77 0.0065111 2139900 7026.3 7431.8 6731.4 6137.3 7160.7 6006.4 6473 6536.7 4725.5 4782 FALSE TRUE 6428.676288 6947.988469 6274.491323 6609.995909 6875.474156 6346.477177 6041.197981 6479.550321 5216.732635 5374.430262 1.196159588 1.29278605 1.167470972 1.229897047 1.279293585 1.180865109 1.124062958 1.205625528 0.970657796 1 12.39189611 -8.095575463 1.101451755 0.979471892 1.226640176 0.715642031 0.05415906 0.251863846 0.575830023 0.048533845 0.01682019 8.02E-09 8.095575463 0.247168284 STFREES(ph)PLR ddPTM_A459_MK2206_30min_R2 1 STFREESPLR 10 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 STFREES(1)PLR 114.24 0.033888 143960000 105370 223540 173180 217380 211610 188050 210650 160950 182280 149410 TRUE FALSE 113437.2082 212439.3287 178953.7348 199619.3586 203301.1281 195206.3745 182991.402 181986.7176 198134.3849 144534.7639 0.784843764 1.469814755 1.238136279 1.381116578 1.406589824 1.350584242 1.266071891 1.259120731 1.370842415 1 17.14105701 -4.751128802 24.99946857 1.316514051 0.784842667 0.614081459 0.123313952 265.60005 643942.0742 0.028142917 0.385606682 1.77E-05 4.751128802 -0.531671384 STFS(ph)PISDIGLAK ddPTM_A459_MK2206_30min_R1 1 STFSPISDIGLAK 13 0 Q8TEK3-1;Q8TEK3;H7C2S2 Q8TEK3-1 DOT1L "Histone-lysine N-methyltransferase, H3 lysine-79 specific" 1 ST(0.002)FS(0.856)PIS(0.143)DIGLAK 132.24 0.0014429 10371000 2663.5 2743.8 2704.7 2376.7 2330.2 2184.1 2289.7 2096.8 2095 1816.9 TRUE FALSE 2436.955338 2565.178121 2521.1125 2559.753846 2237.3832 2307.761855 2136.958291 2078.467899 2312.782747 2041.991289 1.193421026 1.256214037 1.234634307 1.253557672 1.095686946 1.130152644 1.046507055 1.017863254 1.132611466 1 10.995761 -6.488354783 1.588385398 1.057392076 1.238847079 0.767940718 0.044000584 0.174329583 0.891532706 0.01669704 0.018866865 3.25E-07 6.488354783 0.181455003 STFS(ph)PISDIGLAK ddPTM_A459_MK2206_30min_R2 2 STFSPISDIGLAK 13 0 Q8TEK3-1;Q8TEK3;H7C2S2 Q8TEK3-1 DOT1L "Histone-lysine N-methyltransferase, H3 lysine-79 specific" 1 S(0.025)T(0.002)FS(0.972)PISDIGLAK;S(0.008)T(0.008)FS(0.973)PIS(0.01)DIGLAK 160.84 0.00036384 14069600 41486 49116 45564 50031 45525 45846 48045 41650 43509 44013 TRUE FALSE 44662.20006 46676.97086 47083.08102 45943.30726 43737.45976 47590.70166 41736.63379 47093.79801 47293.33417 42576.85941 1.048978264 1.096299058 1.105837341 1.079067547 1.027258947 1.117759795 0.980265674 1.106089051 1.110775544 1 15.37778192 -6.016883956 24.1903081 1.060767638 1.086212332 0.06576577 0.045795513 1492.697079 2138651.384 0.01307143 0.01733249 9.62E-07 6.016883956 0.025444694 STFS(ph)TNYR ddPTM_A459_MK2206_30min_R1 3 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.001)T(0.004)FS(0.688)T(0.307)NYR;S(0.002)T(0.006)FS(0.947)T(0.046)NYR;S(0.002)T(0.002)FS(0.584)T(0.412)NYR 109.83 0.012283 243850000 9882.2 9747.5 8296.9 7364.2 9679 8256.8 7768.8 7124.8 6974.9 6128.8 TRUE FALSE 9041.666997 9112.935978 7733.729544 7931.39196 9293.464934 8724.292881 7250.557527 7062.508625 7699.965815 6888.082014 1.312653795 1.323000504 1.122769666 1.151465959 1.34920939 1.266577962 1.052623577 1.025322958 1.117867906 1 12.74988661 -7.264532866 24.02317694 1.051063834 1.251067158 0.656258603 0.072770719 110.2022931 855791.3928 0.031751177 0.02245348 5.44E-08 7.264532866 0.200003324 STFS(ph)TNYR ddPTM_A459_MK2206_30min_R2 5 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 ST(0.001)FS(0.5)T(0.5)NYR;STFS(0.955)T(0.044)NYR;S(0.004)T(0.04)FS(0.478)T(0.478)NYR;S(0.008)T(0.029)FS(0.525)T(0.438)NYR;S(0.035)T(0.004)FS(0.637)T(0.324)NYR 120.27 0.0074671 371826000 357216 401865 341974 439793 341181 367911 424217 342059 326352 338654 TRUE FALSE 384564.7316 381908.9685 353375.2425 403860.5051 327784.5196 381912.1109 368516.7983 386767.2858 354737.5071 327603.7477 1.173871588 1.165764956 1.078666666 1.232771322 1.000551801 1.165774548 1.124885783 1.180594815 1.082824936 1 18.32159234 -8.554096923 5.663270613 1.00002014 1.137714019 0.344379819 0.060190955 0.229874935 32.25471245 0.054469339 0.014131056 2.79E-09 8.554096923 0.137693879 STFST(ph)NYR ddPTM_A459_MK2206_30min_R1 1 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.006)T(0.001)FS(0.189)T(0.804)NYR 103.88 0.035216 135450000 4398.1 4749.8 3778.3 3176.9 3990.6 3959.7 3517.7 3053.7 3484 2992.5 TRUE FALSE 4024.0185 4440.587157 3521.839523 3421.585388 3831.645952 4183.894792 3283.040651 3027.001823 3846.174268 3363.233492 1.196473129 1.3203327 1.047158793 1.017349939 1.13927444 1.244009612 0.976156029 0.900027259 1.143594186 1 11.71563323 -1.522878746 0.260175369 1.002583191 2.73366029 0.297559798 0.105002557 64.5415261 0.890806113 0.135647972 49.54663029 0.03 1.522878746 1.731077099 STFVLDEFKR ddPTM_A459_MK2206_30min_R1 2 STFVLDEFKR 10 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 107.45 0.015262 45085000 7716.1 9436.3 9729.7 9305.1 8626 7632.8 8528.3 8630.1 7905.5 7709.5 FALSE TRUE 7059.805176 8821.995155 9069.275072 10021.78041 8282.408154 8064.96254 7959.392668 8554.647946 8727.305015 8664.611064 0.81478616 1.018164011 1.046703078 1.156633615 0.955889202 0.930793371 0.918609342 0.987308938 1.007235634 1 13.08091928 STFVLDEFKR ddPTM_A459_MK2206_30min_R2 1 STFVLDEFKR 10 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 115.7 0.0088833 6427100 30068 49872 38342 39689 42911 45525 41208 35208 38597 38793 FALSE TRUE 32370.0292 47395.429 39620.30314 36446.28174 41226.09853 47257.48578 35797.3401 39809.80649 41954.09729 37527.18759 0.862575409 1.262962456 1.055775977 0.971196727 1.098566164 1.259286635 0.953904153 1.060825739 1.1179654 1 15.19564855 -10.85530237 3.544652733 0.999674753 1.076226289 0.02979795 0.119548615 13587797.92 13870720.83 29374.84011 0.027713713 1.40E-11 10.85530237 0.076551536 STGEAFVQFASQEIAEK ddPTM_A459_MK2206_30min_R1 1 STGEAFVQFASQEIAEK 17 0 P31943;G8JLB6;E9PCY7;H0YB39;D6RBM0;E5RGV0;E7EN40;D6RIU0;E5RGH4;P55795 P31943;P55795 HNRNPH1;HNRNPH2 "Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2" 0 243.69 8.23E-22 6485600 2066.4 1499.4 1945.8 1768.5 1942.9 1766.2 1452.9 1672.1 1231.9 1243.6 FALSE TRUE 1890.641829 1401.788787 1813.724517 1904.710176 1865.510179 1866.200718 1355.979692 1657.481006 1359.960413 1397.666557 1.352713077 1.002949366 1.297680415 1.362778674 1.334731929 1.335225994 0.970173956 1.185891583 0.973022075 1 10.4488045 -7.25873825 24.99912492 1.047762866 1.275289946 0.534315392 0.113319062 218.2447617 2019879.806 0.046107444 0.034054712 5.51E-08 7.25873825 0.227527081 STGGAPT(ph)FNVTVTK ddPTM_A459_MK2206_30min_R1 1 STGGAPTFNVTVTK 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 1 STGGAPT(0.995)FNVT(0.005)VTK 125.33 0.0032463 15352000 3306.2 3297.6 3658.4 3164.9 2976.7 2605.6 2923.4 3262.6 2592.6 2565.5 TRUE FALSE 3024.990328 3082.925641 3410.078001 3408.661146 2858.131736 2753.12682 2728.38532 3234.075432 2862.110048 2883.333509 1.04912953 1.069222701 1.18268594 1.182194545 0.991259501 0.954841614 0.946260747 1.12164459 0.992639263 1 11.493522 -6.276956928 24.84541352 1.002134197 1.121543342 0.493730694 0.059373674 694.6611942 1112231.443 0.019975581 0.022732817 5.28E-07 6.276956928 0.119409145 STGGAPTFNVT(ph)VTK ddPTM_A459_MK2206_30min_R1 1 STGGAPTFNVTVTK 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 1 STGGAPT(0.222)FNVT(0.776)VT(0.003)K 192.4 0.00025936 20599000 3794 3640.3 3739.4 3622 3627.8 3090.4 3384.9 3381.1 2886.4 2323.9 TRUE FALSE 3471.300377 3403.315808 3485.579947 3900.967068 3483.297044 3265.375777 3159.099497 3351.539399 3186.451609 2611.802277 1.329082377 1.303052623 1.334549701 1.493592031 1.333675629 1.250238506 1.209547723 1.283228608 1.220020228 1 11.35082997 -6.841248897 2.749632891 1.203609737 1.36385355 0.500309904 0.084262385 0.262924532 4.038112379 0.032213864 0.028525732 1.44E-07 6.841248897 0.160243814 STGGAPTFNVT(ph)VTK ddPTM_A459_MK2206_30min_R2 4 STGGAPTFNVTVTK 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 1 STGGAPT(0.024)FNVT(0.969)VT(0.007)K;STGGAPT(0.02)FNVT(0.98)VTK;STGGAPTFNVT(0.5)VT(0.5)K;STGGAPTFNVT(0.926)VT(0.074)K 195.5 0.00017692 47105000 204205 244187 196719 262046 220152 181250 275952 233867 158879 208105 TRUE FALSE 219839.0918 232061.0287 203277.5133 240636.0036 211507.7263 188147.5958 239719.1709 264434.2199 172698.0082 201314.5509 1.092017894 1.152728542 1.009750723 1.19532345 1.050633078 0.934595115 1.190769221 1.31353754 0.857851593 1 17.61909193 -8.292629478 24.9980539 0.928925775 1.11172894 0.336372649 0.10566144 942.1112359 755069.3034 0.103200434 0.026657028 5.10E-09 8.292629478 0.182803166 STGGAPTFNVTVT(ph)KTDK ddPTM_A459_MK2206_30min_R1 1 STGGAPTFNVTVTKTDK 17 1 P07737;K7EJ44 P07737 PFN1 Profilin-1 1 STGGAPTFNVTVT(0.89)KT(0.109)DK 117.23 0.0022027 17480000 1492.2 1537.1 1381.9 1662 889.23 1010.8 1050.9 1199.1 1113.4 774.89 TRUE FALSE 1365.280554 1437.034511 1288.100478 1790.007528 853.8100861 1068.030622 980.7963785 1188.616395 1229.141914 870.8892233 1.567685668 1.650077268 1.479063518 2.055379123 0.980388852 1.22636794 1.126201074 1.364830754 1.411364249 1 9.76634541 -6.274074735 24.99686064 1.202242921 1.670411269 0.625222569 0.190376665 538.852451 1066023.957 0.058524096 0.066788618 5.32E-07 6.274074735 0.468168348 STGGAPTFNVTVT(ph)KTDK ddPTM_A459_MK2206_30min_R2 1 STGGAPTFNVTVTKTDK 17 1 P07737;K7EJ44 P07737 PFN1 Profilin-1 1 STGGAPTFNVT(0.002)VT(0.883)KT(0.116)DK 87.496 0.014668 25084000 64714 78794 64394 82072 67660 47196 83788 66999 45905 65033 TRUE FALSE 69668.5536 74881.20454 66540.86382 75366.45506 65003.32844 48992.07685 72786.53495 75755.99934 49897.73392 62910.97854 1.107414878 1.19027245 1.057698757 1.197985738 1.033258899 0.778752421 1.156976678 1.20417773 0.793148272 1 15.94102418 -6.43866079 7.028877416 0.998959269 1.134811294 0.227809928 0.131058403 0.456724047 32.82721259 0.041573164 0.047028276 3.64E-07 6.43866079 0.135852026 STGGAPTFNVTVTK ddPTM_A459_MK2206_30min_R1 2 STGGAPTFNVTVTK 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 ; 208.27 8.47E-05 34981000 6196.5 5696.1 5600.3 5257.3 5789 6228.1 5975.2 5679.3 4801.4 5568.6 FALSE TRUE 5669.455136 5325.282855 5220.167239 5662.218157 5558.411872 6580.72964 5576.60531 5629.646479 5300.522712 6258.480209 0.905883688 0.85089074 0.83409503 0.904727341 0.88814084 1.051490046 0.891047846 0.899522934 0.846934485 1 12.61159664 -6.153443125 2.519936504 0.92961501 0.864025112 0.201810897 0.058085214 0.499219678 6.192917779 0.019024271 0.025960136 7.02E-07 6.153443125 -0.065589898 STGGAPTFNVTVTK ddPTM_A459_MK2206_30min_R2 1 STGGAPTFNVTVTK 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 121.56 0.024809 0 17519 21991 18171 22708 24153 43637 20565 19299 29822 18147 FALSE TRUE 18860.26811 20898.95892 18776.81207 20852.68376 23204.63186 45297.63661 17864.7908 21821.44556 32415.86365 17554.86488 1.074361338 1.190493864 1.069607326 1.187857834 1.321834832 2.580346641 1.017654703 1.243042639 1.846545894 1 14.09958327 -6.528734389 24.99959537 1.568091473 1.146047061 0.164331987 0.429914902 279.1065031 1191582.77 0.141660297 0.142051668 2.96E-07 6.528734389 -0.422044413 STGHGGHCTNCQDNTDGAHCER ddPTM_A459_MK2206_30min_R1 1 STGHGGHCTNCQDNTDGAHCER 22 0 P11047 P11047 LAMC1 Laminin subunit gamma-1 0 91.067 0.00013301 1021200 695.8 451.67 449.6 344.55 985.4 1040.3 993.41 692.93 366.51 423.88 FALSE TRUE 636.6185562 422.2662009 419.0824047 371.0873007 946.1494314 1099.200887 927.1414315 686.8717861 404.6100261 476.3934545 1.336329352 0.886381198 0.879698075 0.7789513 1.986067236 2.307338349 1.946167443 1.44181617 0.849319029 1 8.896009781 -6.254262857 24.80057672 1.664372336 0.957868482 0.312702967 0.440227258 595.0404974 2056334.874 0.140170487 0.177119383 5.57E-07 6.254262857 -0.706503854 STGHGGHCTNCQDNTDGAHCER ddPTM_A459_MK2206_30min_R2 1 STGHGGHCTNCQDNTDGAHCER 22 0 P11047 P11047 LAMC1 Laminin subunit gamma-1 0 159.18 1.52E-09 2484500 914.19 2396.8 2425 4068.1 5016.7 8194.5 3946.6 2298.7 5286.2 3706.1 FALSE TRUE 984.1810893 2277.778397 2505.84829 3735.723217 4819.719151 8506.34744 3428.406679 2599.147983 5745.984121 3585.170261 0.274514463 0.635333396 0.698948197 1.041993251 1.344348748 2.372648109 0.956274439 0.72497198 1.602708854 1 11.80782592 -5.761118258 1.870246019 1.34578788 0.462463431 0.413779502 0.429909728 0.367111226 2.617804745 0.142117813 0.289032366 1.73E-06 5.761118258 -0.883324449 STGHT(ph)PTKPSGSSVSEK ddPTM_A459_MK2206_30min_R2 1 STGHTPTKPSGSSVSEK 17 1 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 S(0.001)T(0.001)GHT(0.8)PT(0.189)KPS(0.006)GS(0.002)S(0.002)VSEK 90.017 0.012754 8757900 24316 26761 25868 30603 34222 25591 32687 27685 27642 29273 TRUE FALSE 26177.65166 25432.08765 26730.42621 28102.63701 32878.27233 26564.88344 28395.15764 31303.52456 30046.25119 28317.82441 0.924423122 0.898094687 0.943943497 0.992400991 1.161045137 0.938097611 1.002730903 1.105435365 1.061036708 1 14.78942281 -5.824201358 3.128089508 1.044558167 0.915963976 0.467462808 0.058306914 0.217913409 4.308916229 0.01727281 0.028612825 1.50E-06 5.824201358 -0.128594191 STGS(ph)ATSLASQGER ddPTM_A459_MK2206_30min_R1 1 STGSATSLASQGER 14 0 H0Y2V6;Q5SW79-3;Q5SW79;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 STGS(0.522)AT(0.045)S(0.432)LASQGER 176.43 6.93E-05 10042000 1410.3 1667 1947 1727.3 1399.6 1331.9 1754 1402.3 1461.4 1519.6 TRUE FALSE 1290.346579 1558.477997 1814.843065 1860.336945 1343.850968 1407.311027 1636.99386 1390.039839 1613.31776 1707.85952 0.755534377 0.912532898 1.062641888 1.08927984 0.786862709 0.824020366 0.958506154 0.813907597 0.944643128 1 10.7379736 -4.770691807 5.351265563 0.929212348 0.747575031 0.231114501 0.097058338 0.247779346 21.07169907 0.026018181 0.164786803 1.70E-05 4.770691807 -0.181637317 STGS(ph)PTQETQAPFIAK ddPTM_A459_MK2206_30min_R1 3 STGSPTQETQAPFIAK 16 0 O15231-3;O15231-2;H0Y704 O15231-3 ZNF185 Zinc finger protein 185 1 S(0.001)T(0.004)GS(0.808)PT(0.186)QETQAPFIAK;STGS(0.999)PTQETQAPFIAK;S(0.003)T(0.001)GS(0.992)PT(0.004)QETQAPFIAK 326.09 3.30E-118 38084600 8894.7 8230.1 7409.2 7243.8 8815.8 7901.9 8820.1 7435.1 6990.7 6983.4 TRUE FALSE 8138.159057 7694.318994 6906.284147 7801.718731 8464.648018 8349.298749 8231.727222 7370.095705 7717.408281 7848.556314 1.036898855 0.98034832 0.87994325 0.994032331 1.078497456 1.063800579 1.048820559 0.939038393 0.983290171 1 12.93821159 -4.744772861 23.39598198 0.997107684 1.036899109 0.044823544 0.055978237 1918.468075 2692756.31 0.01562299 0.384560205 1.80E-05 4.744772861 0.039791425 STGS(ph)PTQETQAPFIAK ddPTM_A459_MK2206_30min_R2 4 STGSPTQETQAPFIAK 16 0 O15231-3;O15231-2;H0Y704 O15231-3 ZNF185 Zinc finger protein 185 1 S(0.002)T(0.002)GS(0.995)PT(0.002)QETQAPFIAK;STGS(1)PTQETQAPFIAK;S(0.259)T(0.259)GS(0.471)PT(0.011)QETQAPFIAK;STGS(1)PTQETQAPFIAK 270.78 1.63E-50 67074000 201305 233250 209811 234860 244225 208081 257529 190049 194882 209258 TRUE FALSE 216717.0656 221667.1442 216805.994 215671.1867 234635.4994 215999.6683 223715.133 214889.0568 211832.4841 202429.9286 1.070578185 1.095031479 1.07101749 1.065411563 1.159094908 1.067034256 1.105148505 1.061547857 1.046448445 1 17.62706308 -8.436465257 1.375090369 1.001195186 1.090731187 0.525364503 0.026847864 0.325508381 1.328493584 0.0251018 0.007631272 3.66E-09 8.436465257 0.089536001 STGSPT(ph)QETQAPFIAK ddPTM_A459_MK2206_30min_R1 1 STGSPTQETQAPFIAK 16 0 O15231-3;O15231-2;H0Y704 O15231-3 ZNF185 Zinc finger protein 185 1 S(0.001)T(0.016)GS(0.254)PT(0.728)QET(0.001)QAPFIAK 166.48 3.83E-05 4483000 1038.9 1263.3 1266.1 810.35 1089.6 1055.9 907.88 1005.2 950.89 890.5 TRUE FALSE 950.5360995 1181.05894 1180.16066 872.7632974 1046.198925 1115.684146 847.3169817 996.4116424 1049.738418 1000.821863 0.949755531 1.180089069 1.179191526 0.872046595 1.045339799 1.114767959 0.846621175 0.995593401 1.048876386 1 9.966969495 -5.746062435 24.99904758 0.990502407 1.110719724 0.227235119 0.095977248 350.8360946 570367.0165 0.026077761 0.044955979 1.79E-06 5.746062435 0.120217318 STGTEPPGEVRLADS(ph)AASR ddPTM_A459_MK2206_30min_R1 2 STGTEPPGEVRLADSAASR 19 1 O43586-2 O43586-2 1 STGTEPPGEVRLADS(1)AASR;STGTEPPGEVRLADS(0.999)AASR 122.08 0.00201 59241000 2542.6 3184.3 2948.9 2584.4 3426.3 2556.1 2920.2 2464 2428.5 1883.52 TRUE FALSE 2326.338518 2977.001491 2748.736884 2783.450936 3289.823216 2700.824173 2725.398786 2442.457508 2680.951265 2116.864677 1.098954762 1.406325838 1.298494379 1.314893184 1.554101805 1.27586057 1.287469537 1.153808996 1.266472673 1 11.04771333 -8.620624705 0.733966892 1.006098164 1.333395192 0.395331722 0.114797251 0.82032534 0.973293016 0.113114884 0.042726282 2.40E-09 8.620624705 0.327297028 STGTEPPGEVRLADS(ph)AASR ddPTM_A459_MK2206_30min_R2 1 STGTEPPGEVRLADSAASR 19 1 O43586-2 O43586-2 1 STGTEPPGEVRLADS(1)AASR 101.04 0.0057798 26973000 13206 13906 13310 16289 16764 12714 14710 9633.4 13490 10437 TRUE FALSE 14217.06151 13215.44826 13753.74876 14958.13659 16105.76113 13197.84018 12778.55933 10892.51846 14663.33582 10096.44154 1.408125967 1.308921386 1.362237249 1.481525598 1.595191836 1.307177397 1.265649811 1.078847276 1.452327115 1 13.30155929 -7.137627963 3.034807208 1.202902216 1.424189425 0.400198038 0.132413196 0.292592851 5.137672586 0.054927231 0.040930083 7.28E-08 7.137627963 0.221287209 STIFIS(ph)PSSVK ddPTM_A459_MK2206_30min_R1 1 STIFISPSSVK 11 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 STIFIS(0.991)PS(0.003)S(0.005)VK 179.67 5.21E-05 13555000 8951.3 8904.4 8627 7483.6 7849.6 7249.7 8600.6 8085 7520 7018.5 TRUE FALSE 8189.94493 8324.721942 8041.423276 8059.988169 7536.93381 7660.171749 8026.869667 8014.313697 8301.730911 7888.004767 1.038278395 1.05536472 1.019449596 1.021803156 0.95549306 0.971116521 1.017604566 1.016012786 1.052450037 1 12.94544471 -5.580531335 2.256829581 1.002173876 1.046329007 0.291368177 0.02572508 0.407872494 4.148611726 0.00820644 0.018592387 2.63E-06 5.580531335 0.044155131 STIFIS(ph)PSSVK ddPTM_A459_MK2206_30min_R2 1 STIFISPSSVK 11 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 STIFIS(0.994)PS(0.004)S(0.001)VK 168.76 0.00046055 14770000 42494 55753 48553 53716 46485 40463 55107 36395 41761 46456 TRUE FALSE 45747.37331 52984.38709 50171.73279 49327.23097 44659.76533 42002.84782 47871.3847 41151.95146 45393.29629 44940.14452 1.01796231 1.178999036 1.11641236 1.097620657 0.993761053 0.934639803 1.065225428 0.91570581 1.010083452 1 15.45571714 -6.254009098 4.175201837 0.982722152 1.110924902 0.535864634 0.052903207 0.151897324 6.524176759 0.015622066 0.019314346 5.57E-07 6.254009098 0.12820275 STIFISPS(ph)SVK ddPTM_A459_MK2206_30min_R2 1 STIFISPSSVK 11 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 STIFIS(0.246)PS(0.614)S(0.14)VK 140.91 0.0010477 11094000 45959 50046 49350 53002 43737 38467 46201 36185 35573 43941 TRUE FALSE 49477.65638 47560.78841 50995.30437 48671.56705 42019.66562 39930.88864 40134.7532 40914.50374 38667.07524 42507.20877 1.163982718 1.118887591 1.199686026 1.145019127 0.988530342 0.939390983 0.944186983 0.962530943 0.90965924 1 15.37541991 -6.30688273 3.327501032 0.949535908 1.159934795 0.925226515 0.027964741 0.058832835 1.326823418 0.008677549 0.01039706 4.93E-07 6.30688273 0.210398887 STIGVMVT(ph)ASHNPEEDNGVK ddPTM_A459_MK2206_30min_R2 2 STIGVMVTASHNPEEDNGVK 20 0 D6RC77;D6RCQ8;D6RF77;A0A494C163;A0A494C099;A0A494C0G1;H0Y987;O95394;O95394-3;O95394-4 D6RC77 PGM3 Phosphoacetylglucosamine mutase 1 STIGVMVT(0.984)AS(0.016)HNPEEDNGVK;STIGVMVT(0.926)AS(0.074)HNPEEDNGVK 79.172 0.0062359 44945000 133986 156071 153582 176678 182265 147308 171068 152574 136752 164797 TRUE FALSE 144244.0712 148320.7411 158702.3472 162242.8422 175108.3603 152913.9092 148606.5661 172515.9457 148646.4418 159419.6874 0.904807139 0.930379074 0.995500304 1.017708947 1.098411138 0.959190873 0.932171983 1.082149567 0.932422113 1 17.28247028 -5.20761906 2.886167769 1.005960901 0.908607964 0.29821356 0.052543707 0.333662828 5.378027644 0.014107129 0.047057017 6.20E-06 5.20761906 -0.097352936 STIGVMVTAS(ph)HNPEEDNGVK ddPTM_A459_MK2206_30min_R1 14 STIGVMVTASHNPEEDNGVK 20 0 D6RC77;D6RCQ8;D6RF77;A0A494C163;A0A494C099;A0A494C0G1;H0Y987;O95394;O95394-3;O95394-4 D6RC77 PGM3 Phosphoacetylglucosamine mutase 1 STIGVMVT(0.005)AS(0.995)HNPEEDNGVK;STIGVMVTAS(1)HNPEEDNGVK;STIGVMVTAS(1)HNPEEDNGVK;STIGVMVTAS(1)HNPEEDNGVK;STIGVMVT(0.017)AS(0.983)HNPEEDNGVK;STIGVMVT(0.017)AS(0.983)HNPEEDNGVK;STIGVMVT(0.002)AS(0.998)HNPEEDNGVK;STIGVMVT(0.004)AS(0.996)HNPEEDNGVK;STIGVMVT(0.01)AS(0.99)HNPEEDNGVK;STIGVMVT(0.023)AS(0.977)HNPEEDNGVK;STIGVMVT(0.288)AS(0.712)HNPEEDNGVK;STIGVMVT(0.345)AS(0.655)HNPEEDNGVK;STIGVMVT(0.311)AS(0.689)HNPEEDNGVK;STIGVMVT(0.083)AS(0.917)HNPEEDNGVK 200.04 7.01E-16 647190700 79007.1 78792.2 86739.8 68265.2 72790.5 62583.6 68552.5 71342.9 73355.7 64391.2 TRUE FALSE 72287.13126 73662.81346 80852.14405 73522.99753 69891.10025 66127.02935 63979.48781 70719.15655 80981.28752 72368.46798 0.998876075 1.017885489 1.117228902 1.015953489 0.965767304 0.913754722 0.884079622 0.977209529 1.119013429 1 16.14307361 -6.11653488 4.32910043 0.968071981 1.045201007 0.174497537 0.064910436 0.378399073 11.6578383 0.020775177 0.027527963 7.65E-07 6.11653488 0.077129025 STIGVMVTAS(ph)HNPEEDNGVK ddPTM_A459_MK2206_30min_R2 13 STIGVMVTASHNPEEDNGVK 20 0 D6RC77;D6RCQ8;D6RF77;A0A494C163;A0A494C099;A0A494C0G1;H0Y987;O95394;O95394-3;O95394-4 D6RC77 PGM3 Phosphoacetylglucosamine mutase 1 STIGVMVT(0.004)AS(0.996)HNPEEDNGVK;STIGVMVT(0.004)AS(0.996)HNPEEDNGVK;STIGVMVT(0.013)AS(0.987)HNPEEDNGVK;STIGVMVT(0.009)AS(0.991)HNPEEDNGVK;STIGVMVT(0.011)AS(0.989)HNPEEDNGVK;STIGVMVT(0.015)AS(0.985)HNPEEDNGVK;STIGVMVT(0.002)AS(0.998)HNPEEDNGVK;STIGVMVT(0.002)AS(0.997)HNPEEDNGVK;STIGVMVT(0.066)AS(0.934)HNPEEDNGVK;STIGVMVT(0.435)AS(0.565)HNPEEDNGVK;STIGVMVT(0.141)AS(0.859)HNPEEDNGVK;STIGVMVT(0.258)AS(0.742)HNPEEDNGVK;STIGVMVT(0.037)AS(0.963)HNPEEDNGVK 153.1 4.71E-06 794336900 1020038 1117041 1064918 1122985 1131975 895762 1217267 983941 906067 1083527 TRUE FALSE 1098132.894 1061570.368 1100421.835 1031233.533 1087527.974 929850.8506 1057438.381 1112545.467 984875.0699 1048171.603 1.047665183 1.012782988 1.049848929 0.983840366 1.037547641 0.887117003 1.008840898 1.061415387 0.939612433 1 19.9994435 -5.76913113 24.95083872 0.989585083 1.03436743 0.183064414 0.046745725 308.9121622 1002066.295 0.013164619 0.01996299 1.70E-06 5.76913113 0.044782347 STKPSPMNPLPSSHMPGAFS(ph)ESNSS(ph)FPQ ddPTM_A459_MK2206_30min_R2 1 STKPSPMNPLPSSHMPGAFSESNSSFPQ 28 1 E5RKA2 E5RKA2 LCP2 2 S(0.001)T(0.001)KPS(0.001)PMNPLPS(0.001)S(0.002)HMPGAFS(0.44)ES(0.44)NS(0.208)S(0.906)FPQ 41.047 0.039536 5974600 1180.1 6740.8 1974 12314 9916.2 34937 4640.7 4297.1 15478 1028.1 TRUE FALSE 1270.449363 6406.061674 2039.812175 11307.90681 9526.840163 36266.55202 4031.370516 4858.745724 16824.24846 994.5531812 1.277407169 6.441145426 2.05098351 11.36983625 9.579015324 36.4651712 4.053448917 4.88535537 16.91638897 1 9.957904707 -1.813099057 13.53041021 9.887809588 5.420780599 0 10.21538386 0 0 2.384320496 0 0.015378038 1.813099057 -4.46702899 STKPVVFS(ph)PTLMLTDEEK ddPTM_A459_MK2206_30min_R1 2 STKPVVFSPTLMLTDEEK 18 1 P40818;P40818-2;A0A075B720 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.018)T(0.018)KPVVFS(0.786)PT(0.015)LMLT(0.163)DEEK;STKPVVFS(0.999)PT(0.001)LMLTDEEK 122.47 0.00049986 30218000 18312.1 18720.3 18131.8 15398 13387.5 10809.6 12164.3 13513.4 13416.8 12243.8 TRUE FALSE 16754.55973 17501.60507 16901.06393 16583.95663 12854.24753 11421.63021 11352.84174 13395.25377 14811.52437 13760.65438 1.217569984 1.271858488 1.228216585 1.205172092 0.934130541 0.830020862 0.825021938 0.973445986 1.076367734 1 13.74826146 -6.239697816 4.495876676 0.925825725 1.237610961 0.797122557 0.071819745 0.093314236 4.843943372 0.024044978 0.030134764 5.76E-07 6.239697816 0.311785236 STKPVVFS(ph)PTLMLTDEEK ddPTM_A459_MK2206_30min_R2 2 STKPVVFSPTLMLTDEEK 18 1 P40818;P40818-2;A0A075B720 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 STKPVVFS(0.909)PT(0.007)LMLT(0.085)DEEK;S(0.001)T(0.001)KPVVFS(0.932)PT(0.027)LMLT(0.039)DEEK 99.078 0.0017139 17389200 146036 151772 149677 135032 133091 92249 132867 99540 94106 126704 TRUE FALSE 157216.6284 144235.2232 154667.1565 123999.4537 127865.1786 95759.60034 115421.4033 112550.2198 102291.1698 122569.6589 1.282671665 1.176761235 1.261871477 1.011665161 1.043204165 0.781266761 0.941680057 0.918255144 0.834555393 1 16.90324237 -6.023371695 1.47177113 0.897819854 1.246407872 0.785777808 0.074728442 0.169491536 0.741968018 0.024890591 0.042787608 9.48E-07 6.023371695 0.348588017 STLESEKPGS(ph)PEAAETS(ph)PPSNIIDHCEK ddPTM_A459_MK2206_30min_R2 1 STLESEKPGSPEAAETSPPSNIIDHCEK 28 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 2 STLES(0.004)EKPGS(0.814)PEAAET(0.32)S(0.858)PPS(0.004)NIIDHCEK 76.161 7.35E-05 10396000 60614 67573 69690 70748 73597 57070 83390 63157 53356 72626 TRUE FALSE 65254.65444 64217.42308 72013.42982 64967.66209 70707.21198 59241.83884 72440.79283 71411.83675 57996.80843 70256.21957 0.928809646 0.914046094 1.025011455 0.924724707 1.006419253 0.843225542 1.031094375 1.01644861 0.825504258 1 16.10033833 -10.798661 3.389940303 1.000170175 0.950200643 0.047758085 0.070068815 96533723.08 110573808 163681.3192 0.01665096 1.59E-11 10.798661 -0.049969532 STLESEKPGS(ph)PEAAETSPPSNIIDHCEK ddPTM_A459_MK2206_30min_R1 2 STLESEKPGSPEAAETSPPSNIIDHCEK 28 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 S(0.042)T(0.042)LES(0.106)EKPGS(0.741)PEAAET(0.047)S(0.021)PPS(0.001)NIIDHCEK;S(0.044)T(0.044)LES(0.103)EKPGS(0.801)PEAAET(0.005)S(0.002)PPSNIIDHCEK 43.873 0.032367 67861000 6194.71 5968.54 7222 6005.5 6100.89 5530 6128.3 6316.99 6530.08 5923.78 TRUE FALSE 5667.817385 5579.986961 6731.790762 6468.044651 5857.878632 5843.103821 5719.492289 6261.761222 7208.905184 6657.662589 0.851322414 0.838130032 1.011134264 0.971518842 0.879870158 0.877650939 0.859084132 0.94053448 1.082798218 1 12.70080004 -8.095982158 4.866852042 1.03859712 0.901511833 0.514748119 0.054656751 0.198891997 7.486701892 0.042032772 0.015213684 8.02E-09 8.095982158 -0.137085287 STLESEKPGS(ph)PEAAETSPPSNIIDHCEK ddPTM_A459_MK2206_30min_R2 5 STLESEKPGSPEAAETSPPSNIIDHCEK 28 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 STLES(0.006)EKPGS(0.993)PEAAET(0.001)SPPSNIIDHCEK;S(0.001)T(0.001)LES(0.004)EKPGS(0.963)PEAAET(0.029)S(0.002)PPSNIIDHCEK;STLES(0.002)EKPGS(0.998)PEAAETSPPSNIIDHCEK;S(0.035)T(0.035)LES(0.087)EKPGS(0.741)PEAAET(0.072)S(0.029)PPS(0.001)NIIDHCEK;S(0.002)T(0.001)LES(0.023)EKPGS(0.974)PEAAETSPPSNIIDHCEK 111.56 2.31E-10 92080000 212624 240893 220706 220090 221340 166264 269988 194512 177750 244639 TRUE FALSE 228902.6569 228930.6039 228064.2279 202107.943 212649.0795 172591.293 234538.2513 219935.3863 193210.3737 236656.4495 0.967236082 0.967354173 0.963693271 0.854014093 0.898556029 0.729290469 0.99104948 0.92934457 0.816417106 1 17.85243471 -5.746197622 23.27699277 0.883510668 0.966220591 0.181023955 0.075250011 173.5444849 265028.7257 0.020165978 0.034715616 1.79E-06 5.746197622 0.082709924 STLNPQWNES(ph)FTFK ddPTM_A459_MK2206_30min_R1 2 STLNPQWNESFTFK 14 0 P17252;J3KRN5 P17252 PRKCA Protein kinase C alpha type 1 STLNPQWNES(0.987)FT(0.013)FK;STLNPQWNES(0.975)FT(0.025)FK 180.56 7.39E-05 137795000 8189.9 7721.9 8084 7209.6 7807.7 6670.4 7145.6 7672.8 7514.5 6903.7 TRUE FALSE 7493.305998 7219.202906 7535.280603 7764.884641 7496.702776 7048.072284 6668.930062 7605.717519 8295.659166 7758.982476 0.965758851 0.930431655 0.971168659 1.000760688 0.966196637 0.908375848 0.859510907 0.980246771 1.069168437 1 12.92165175 -8.005806749 24.96749281 1.031292033 0.943689318 0.453686234 0.039910555 234.5257754 1008393.687 0.024764504 0.011309837 9.87E-09 8.005806749 -0.087602715 STLNPQWNES(ph)FTFK ddPTM_A459_MK2206_30min_R2 1 STLNPQWNESFTFK 14 0 P17252;J3KRN5 P17252 PRKCA Protein kinase C alpha type 1 STLNPQWNES(0.977)FT(0.023)FK 109.55 0.0045316 19488000 56109 70493 71221 66997 61133 55320 64369 56656 61351 63995 TRUE FALSE 60404.74818 66992.42013 73595.47259 61523.13079 58732.61125 57425.24136 55917.27298 64061.13373 66687.19908 61906.84839 0.975736122 1.082148775 1.188809873 0.993801694 0.94872559 0.92760725 0.903248581 1.034798821 1.077218447 1 15.91781139 -5.971290237 24.93243784 0.976498978 1.083737142 0.309878756 0.067327547 244.5037219 212332.9158 0.020173267 0.02992127 1.07E-06 5.971290237 0.107238164 STLPDADRER ddPTM_A459_MK2206_30min_R1 3 STLPDADRER 10 1 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ;; 134.23 0.0060225 303373000 10952.2 10844.6 11613.6 9835.1 12937.5 11756.4 11303.5 10863.2 8368.9 6671.4 FALSE TRUE 10020.65788 10138.61457 10825.30119 10592.60111 12422.17198 12422.03721 10549.46414 10768.22419 9238.877103 7497.903399 1.336461321 1.352193277 1.443777095 1.412741742 1.656752737 1.656734763 1.406988538 1.4361647 1.232194737 1 12.87227152 -9.788265821 9.208145849 1.000000006 1.44609939 0.5199667 0.125730919 0 0 0.131959267 0.032004823 1.63E-10 9.788265821 0.446099384 STLPDADRER ddPTM_A459_MK2206_30min_R2 1 STLPDADRER 10 1 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 122.96 0.012122 32259000 35765 59701 49928 57941 53273 57847 57034 39445 43107 54384 FALSE TRUE 38503.1959 56736.33515 51592.5746 53207.03496 51181.23434 60048.40812 49545.36729 44600.59693 46856.36894 52609.45453 0.731868373 1.078443707 0.980671156 1.011358803 0.972852405 1.141399557 0.941757859 0.847767713 0.890645405 1 15.68303447 -7.518498217 24.9323193 0.900476474 0.994844394 0.083804199 0.105527578 365.6094047 2080952.572 0.046717495 0.027836562 3.03E-08 7.518498217 0.094367919 STLSPPEAS(ph)PGPPAAPR ddPTM_A459_MK2206_30min_R2 1 STLSPPEASPGPPAAPR 17 0 Q6NUJ5-2;Q6NUJ5 Q6NUJ5-2 PWWP2B PWWP domain-containing protein 2B 1 STLS(0.001)PPEAS(0.999)PGPPAAPR 128.45 0.00083239 0 8946 10268 11414 11649 8982.2 9529.1 10713 9596.5 9687.5 10992 TRUE FALSE 9630.912638 9758.106051 11794.53706 10697.23944 8629.513696 9891.736578 9306.370231 10850.7955 10530.10124 10633.33194 0.90572858 0.917690344 1.109204258 1.00601011 0.811553118 0.93025748 0.875207346 1.020451121 0.990291782 1 13.37630611 -7.79582857 24.99365017 1.004028645 0.940064127 0.143298749 0.074785741 442.3329467 321476.5659 0.044476166 0.021367392 1.60E-08 7.79582857 -0.063964519 STLTDS(ph)LVCK ddPTM_A459_MK2206_30min_R2 1 STLTDSLVCK 10 0 P13639 P13639 EEF2 Elongation factor 2 1 STLT(0.11)DS(0.89)LVCK 100.93 0.016899 3633100 19144 16813 12409 17572 13688 12275 19106 14150 11674 15126 TRUE FALSE 20609.67936 15978.09087 12822.70987 16136.31139 13150.54034 12742.13373 16597.35925 15999.45358 12689.38342 14632.43986 1.408492333 1.091963543 0.876320695 1.102776539 0.898725057 0.870814017 1.134285151 1.093423499 0.867208992 1 13.83688273 -4.804478632 3.280541393 0.986351226 1.45561898 0.634781112 0.097574704 0.195544088 3.356908164 0.024917254 0.228165653 1.57E-05 4.804478632 0.469267754 STLTTLPFPGAEANS(ph)PGK ddPTM_A459_MK2206_30min_R1 1 STLTTLPFPGAEANSPGK 18 0 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 S(0.001)T(0.001)LT(0.001)T(0.025)LPFPGAEANS(0.973)PGK 104.44 0.003568 0 920.85 1171.6 1064.3 776.16 592.38 731.82 958.44 981.48 1232.2 1426 TRUE FALSE 842.5268719 1095.328627 992.0582813 835.9399777 568.7842502 773.255016 894.5042164 972.8990238 1360.291599 1602.663646 0.525704114 0.683442611 0.619005918 0.521594147 0.354899328 0.482481161 0.558135962 0.607051284 0.848769237 1 10.64625596 -8.347359694 1.916411191 0.998993733 0.533868664 0.792198617 0.080586815 0.15898738 1.151029969 0.087312699 0.025155997 4.49E-09 8.347359694 -0.46512507 STLTTLPFPGAEANS(ph)PGK ddPTM_A459_MK2206_30min_R2 2 STLTTLPFPGAEANSPGK 18 0 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 STLTTLPFPGAEANS(1)PGK;STLTTLPFPGAEANS(1)PGK 156.73 6.11E-05 0 60255 38883 45767 43284 37461 26530 48219 38443 28770 55159 TRUE FALSE 64868.16913 36952.12676 47292.84894 39747.55874 35990.09291 27539.61774 41887.78738 43467.63209 31272.3626 53359.16635 1.215689329 0.692516943 0.886311616 0.744905917 0.674487541 0.516117841 0.785015776 0.814623523 0.586072923 1 15.70344851 STLTTLPFPGAEANS(ph)PGKAEAEKPR ddPTM_A459_MK2206_30min_R1 2 STLTTLPFPGAEANSPGKAEAEKPR 25 2 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 STLTTLPFPGAEANS(1)PGKAEAEKPR;STLTTLPFPGAEANS(1)PGKAEAEKPR 89.816 2.12E-05 67503000 9224.7 12123.3 11335.9 10852.8 7533.7 6788 7756.8 9268.2 9588.9 8810.7 TRUE FALSE 8440.090824 11334.07097 10566.45069 11688.68454 7233.616776 7172.330694 7239.358025 9187.169105 10585.70047 9902.236033 0.852341915 1.144597132 1.06707724 1.180408596 0.730503368 0.724314253 0.731083161 0.927787327 1.069021222 1 13.27353862 -6.260943966 24.99998116 0.846565637 1.067496358 0.329307041 0.136514816 51.30845703 2589179.634 0.043146046 0.052382157 5.48E-07 6.260943966 0.220930721 STLTTLPFPGAEANS(ph)PGKAEAEKPR ddPTM_A459_MK2206_30min_R2 2 STLTTLPFPGAEANSPGKAEAEKPR 25 2 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 STLTTLPFPGAEANS(1)PGKAEAEKPR;STLTTLPFPGAEANS(1)PGKAEAEKPR 83.755 4.73E-05 39778000 277560 297100 310660 264700 317150 189513 352730 257850 234910 327750 TRUE FALSE 298810.207 282346.446 321017.2493 243073.1633 304697.0974 196725.05 306416.1273 291551.8803 255342.0472 317055.5443 0.942453814 0.890526758 1.012495303 0.76665798 0.961021193 0.620475035 0.96644305 0.919560896 0.805354304 1 18.27437608 -5.752540104 24.99884898 0.85775156 0.942695409 0.110869256 0.110213799 436.4832633 1226106.993 0.028848148 0.049027237 1.77E-06 5.752540104 0.084943849 STNGDTFLGGEDFDQALLR ddPTM_A459_MK2206_30min_R1 2 STNGDTFLGGEDFDQALLR 19 0 P38646 P38646 HSPA9 "Stress-70 protein, mitochondrial" 0 ; 189.04 3.73E-14 8725400 1303.99 1349.04 1664.78 1560 1705.16 1760.92 1702.57 1501.87 1039.6 1456.41 FALSE TRUE 1193.078803 1261.217251 1551.779372 1680.15147 1637.239866 1860.621769 1588.994662 1488.739309 1147.67014 1636.841066 0.72889105 0.770519067 0.948033016 1.026459749 1.00024364 1.136714985 0.970769059 0.909519769 0.701149405 1 10.67669853 -5.244091467 3.623762379 0.970280132 0.73855096 0.399323431 0.104376042 0.235095719 6.737068159 0.0295868 0.08287727 5.70E-06 5.244091467 -0.231729172 STNGDTFLGGEDFDQALLR ddPTM_A459_MK2206_30min_R2 1 STNGDTFLGGEDFDQALLR 19 0 P38646 P38646 HSPA9 "Stress-70 protein, mitochondrial" 0 147.64 0.00055716 2163800 4825.8 5538.8 7098.1 7544.9 5732 7991.4 5496.2 3760.2 8108.5 6400.7 FALSE TRUE 5195.266958 5263.751246 7334.747111 6928.457535 5506.932879 8295.518327 4774.542338 4251.671051 8813.762673 6191.845683 0.839049812 0.850110212 1.184581704 1.118964827 0.88938471 1.339748881 0.771101636 0.686656494 1.42344676 1 12.5961538 -5.159542754 9.527488052 1.037339793 0.842628741 0.121191376 0.220466535 0.895273034 77.86444581 0.055449791 0.147408061 6.93E-06 5.159542754 -0.194711052 STNS(ph)PTIVSPAIVSPTQDSRPNMSR ddPTM_A459_MK2206_30min_R1 1 STNSPTIVSPAIVSPTQDSRPNMSR 25 1 A0A2U3U043 A0A2U3U043 1 S(0.083)T(0.083)NS(0.75)PT(0.066)IVS(0.018)PAIVSPTQDSRPNMSR 70.572 0.00060848 8467400 904.48 906.78 943.69 914.87 849.84 700.54 1228.5 897.72 847.16 767.3 TRUE FALSE 827.5492264 847.7484572 879.6349521 985.3334459 815.9890732 740.2039694 1146.549007 889.8713287 935.2253136 862.3589168 0.959634336 0.983057565 1.020033463 1.14260249 0.946229067 0.858347905 1.329549662 1.031903667 1.0844966 1 9.752144639 -7.233299065 24.99999226 1.114146274 0.991892617 0.25444844 0.105647702 1084.248676 963252.8457 0.040608085 0.031448236 5.84E-08 7.233299065 -0.122253657 STNS(ph)PTIVSPAIVSPTQDSRPNMSR ddPTM_A459_MK2206_30min_R2 1 STNSPTIVSPAIVSPTQDSRPNMSR 25 1 A0A2U3U043 A0A2U3U043 1 S(0.061)T(0.061)NS(0.438)PT(0.438)IVS(0.002)PAIVSPTQDSRPNMSR 62.291 0.0025395 6604300 15624 11713 14150 17847 11934 13404 17943 14216 15263 16567 TRUE FALSE 16820.18545 11131.34945 14621.75394 16388.84301 11465.4112 13914.09861 15587.06255 16074.08001 16590.54815 16026.42015 1.049528547 0.694562438 0.91235309 1.022614087 0.715406878 0.868197544 0.972585419 1.002973831 1.035199876 1 13.96816458 -7.386300936 3.386247701 1.010984686 0.869725425 0.25487799 0.106251857 0.35063072 7.444630636 0.048266795 0.030664468 4.11E-08 7.386300936 -0.14125926 STPCIQNGS(ph)VK ddPTM_A459_MK2206_30min_R2 1 STPCIQNGSVK 11 0 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 STPCIQNGS(1)VK 105 0.01096 0 13141 13959 16205 14302 7201 8716.6 9232.2 5836.9 12340 12151 TRUE FALSE 14147.08506 13265.81636 16745.26661 13133.48085 6918.252558 9048.316321 8020.00105 6599.802871 13413.31089 11754.51387 1.203544887 1.128572097 1.424581808 1.117313825 0.588561351 0.769773759 0.682291173 0.561469657 1.141120003 1 13.52092725 -6.099289308 5.209752468 0.764179449 1.24480119 0.578981139 0.180377227 0.14804317 6.147649141 0.052016266 0.068346471 7.96E-07 6.099289308 0.480621741 STPENHPET(ph)PK ddPTM_A459_MK2206_30min_R1 1 STPENHPETPK 11 0 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 STPENHPET(1)PK 162.48 0.00013876 0 2589.7 2839.4 2865 1943.3 2190.1 1872.7 2053.1 2091.4 1963.3 2205.5 TRUE FALSE 2369.432416 2654.554544 2670.531782 2092.973303 2102.863679 1978.730656 1916.141445 2073.11511 2167.392061 2478.733991 0.955904274 1.070931594 1.077377319 0.844371889 0.848361981 0.798282778 0.773032303 0.836360464 0.874394779 1 11.27538774 -5.769048672 24.97708265 0.840852057 1.038357121 0.615529637 0.065066089 95.04913561 311994.3228 0.017765542 0.026926654 1.70E-06 5.769048672 0.197505064 STPENHPET(ph)PK ddPTM_A459_MK2206_30min_R2 1 STPENHPETPK 11 0 A0A590UJS4;Q6KC79-2;Q6KC79;Q6KC79-3 A0A590UJS4 NIPBL Nipped-B-like protein 1 STPENHPET(1)PK 127.3 0.0040591 16669000 121290 136520 133140 121340 136700 90505 148700 113840 101500 145610 TRUE FALSE 130576.0557 129740.6153 137578.8211 111426.1339 131332.4711 93949.23119 129175.5114 128719.2789 110328.2865 140858.7576 0.92699991 0.92106886 0.976714714 0.791048677 0.932369938 0.666974725 0.917057012 0.913818076 0.783254718 1 17.10388974 -5.751853256 24.99624634 0.851824547 0.939541932 0.151740322 0.089992985 359.2460665 936741.6019 0.023491683 0.040019744 1.77E-06 5.751853256 0.087717385 STPES(ph)GDSDKESVGSSSTSNEGGR ddPTM_A459_MK2206_30min_R1 1 STPESGDSDKESVGSSSTSNEGGR 24 1 Q6GQQ9;Q6GQQ9-2 Q6GQQ9 OTUD7B OTU domain-containing protein 7B 1 S(0.017)T(0.017)PES(0.668)GDS(0.189)DKES(0.017)VGS(0.011)S(0.035)S(0.035)T(0.009)S(0.001)NEGGR 57.068 0.0071145 7882000 769.26 816.81 925.27 660.44 706.2 408.43 619.86 689.31 624.9 783.41 TRUE FALSE 703.8303975 763.6355205 862.4652503 711.3072032 678.0705586 431.5549536 578.5102704 683.2834353 689.8605912 880.4647452 0.799385099 0.867309594 0.979556825 0.807876984 0.770128006 0.490144501 0.657051033 0.776048603 0.783518698 1 9.782121428 -6.176928386 3.108980628 0.716359225 0.880400153 0.160571257 0.127789953 0.381334463 7.156475679 0.040301901 0.053215179 6.65E-07 6.176928386 0.164040928 STPESGDS(ph)DKESVGSSSTSNEGGR ddPTM_A459_MK2206_30min_R2 2 STPESGDSDKESVGSSSTSNEGGR 24 1 Q6GQQ9;Q6GQQ9-2 Q6GQQ9 OTUD7B OTU domain-containing protein 7B 1 S(0.005)T(0.005)PES(0.095)GDS(0.637)DKES(0.005)VGS(0.012)S(0.044)S(0.168)T(0.015)S(0.015)NEGGR;STPES(0.021)GDS(0.974)DKES(0.001)VGSS(0.001)S(0.002)TSNEGGR 66.122 0.0014541 37127000 68572 68590 64881 60638 62986 52619 70105 56477 53499 72981 TRUE FALSE 73821.92504 65183.92034 67044.10016 55683.68143 60512.85316 54621.45292 60900.12929 63858.73781 58152.24632 70599.63595 1.045641724 0.923289752 0.949638044 0.788724767 0.857126986 0.77367896 0.862612512 0.904519364 0.823690456 1 16.10737312 -4.828829165 1.217250563 0.8542544 1.111429526 0.410590298 0.064749902 1.266500394 1.700728074 0.019007272 0.405360045 1.48E-05 4.828829165 0.257175126 STPFIVPS(ph)SPTEQEGR ddPTM_A459_MK2206_30min_R1 6 STPFIVPSSPTEQEGR 16 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 STPFIVPS(0.503)S(0.497)PTEQEGR;STPFIVPS(0.912)S(0.087)PT(0.001)EQEGR;STPFIVPS(0.956)S(0.044)PTEQEGR;STPFIVPS(0.794)S(0.131)PT(0.075)EQEGR;STPFIVPS(0.74)S(0.255)PT(0.005)EQEGR;STPFIVPS(0.494)S(0.494)PT(0.011)EQEGR 268.18 2.35E-50 633532400 22847 21442.7 22663.3 19367.2 24615.8 19388.3 22518.5 21004.7 19343 16997.3 TRUE FALSE 20903.74268 20046.77633 21124.97834 20858.8651 23635.30056 20486.04879 21016.33195 20821.05812 21353.77407 19103.05385 1.094261831 1.049401656 1.105842998 1.091912595 1.23725247 1.072396537 1.100155615 1.089933489 1.117819917 1 14.22151567 -10.18872827 8.298335188 1.000000004 1.106583138 0.313985545 0.047249652 0 0 0.046808925 0.011352832 6.48E-11 10.18872827 0.106583133 STPFIVPS(ph)SPTEQEGR ddPTM_A459_MK2206_30min_R2 5 STPFIVPSSPTEQEGR 16 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 STPFIVPS(0.57)S(0.429)PT(0.001)EQEGR;STPFIVPS(0.742)S(0.258)PTEQEGR;STPFIVPS(0.749)S(0.247)PT(0.003)EQEGR;STPFIVPS(0.498)S(0.498)PT(0.004)EQEGR;STPFIVPS(0.906)S(0.092)PT(0.001)EQEGR 248.81 2.56E-29 182511900 268227.7 340633.8 262356 329079.7 334494.1 345127.4 336852.9 272637.5 260558.5 295112.3 TRUE FALSE 288763.4189 323718.4208 271102.8181 302192.8358 321360.1809 358261.465 292623.7096 308272.1574 283221.4073 285482.8098 1.011491442 1.133933147 0.94962922 1.058532512 1.125672615 1.25493183 1.025013414 1.07982739 0.992078674 1 18.12304435 -8.258331538 20.43262608 0.99603924 1.082160279 0.155519661 0.078002039 39.33123597 258663.5718 0.0609932 0.020625509 5.52E-09 8.258331538 0.08612104 STPFIVPSS(ph)PTEQEGR ddPTM_A459_MK2206_30min_R1 2 STPFIVPSSPTEQEGR 16 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 STPFIVPS(0.145)S(0.85)PT(0.005)EQEGR;STPFIVPS(0.434)S(0.559)PT(0.007)EQEGR 223.68 3.45E-11 298296800 5414.7 5219 5136.9 4647.2 5710.2 4398.5 5725.4 4817.7 3909.31 4045.2 TRUE FALSE 4954.151331 4879.242151 4788.22154 5005.128149 5482.750642 4647.539269 5343.469013 4775.579357 4315.696764 4546.349916 1.089698642 1.073221869 1.053201278 1.100911334 1.205967588 1.022257273 1.175331664 1.050420545 0.9492663 1 12.15049301 -8.036867921 5.59785857 0.980202848 1.101597629 0.4875365 0.052271082 0.1676203 14.13177029 0.034279931 0.0132431 9.19E-09 8.036867921 0.121394781 STPFIVPSS(ph)PTEQEGR ddPTM_A459_MK2206_30min_R2 3 STPFIVPSSPTEQEGR 16 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 STPFIVPS(0.036)S(0.959)PT(0.005)EQEGR;STPFIVPS(0.226)S(0.774)PTEQEGR;STPFIVPS(0.209)S(0.791)PTEQEGR 254.89 5.14E-30 625560500 953306 1226454 1093772 1253234 1242398 1171760 1075021 923079 931512 979928 TRUE FALSE 1026291.84 1165550.078 1130237.813 1150840.773 1193615.212 1216352.148 933869.4514 1043728.595 1012533.23 947953.0296 1.082639971 1.229544124 1.192293054 1.214027212 1.259150163 1.283135461 0.985143169 1.101034083 1.06812595 1 19.85445605 -7.263260993 24.99905656 1.046995306 1.212608387 0.67319627 0.05842473 104.3623473 1432210.374 0.023874208 0.017021913 5.45E-08 7.263260993 0.165613082 STPKEDDSSASTSQSTR ddPTM_A459_MK2206_30min_R1 3 STPKEDDSSASTSQSTR 17 1 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ;; 163.9 2.42E-05 10157300 2505.09 2277.42 2833.26 2263.83 2656.88 2243.58 2364.18 3180.1 1685.81 1196.85 FALSE TRUE 2292.018941 2129.159544 2640.946205 2438.190579 2551.050844 2370.609561 2206.469866 3152.296721 1861.055982 1345.124814 1.703945178 1.582871361 1.963346582 1.812612892 1.896516083 1.762371444 1.64034582 2.343497562 1.383556353 1 10.39352433 -8.520268593 24.57988532 0.99999998 1.828176234 0.64728068 0.200987068 94.61016393 890942.848 0.186996754 0.048282354 3.02E-09 8.520268593 0.828176254 STPKEDDSSASTSQSTR ddPTM_A459_MK2206_30min_R2 1 STPKEDDSSASTSQSTR 17 1 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 89.136 0.027325 1488400 1240.9 3476 3824.2 5250.7 4382.8 4057.7 3652 2110.6 3572.2 4006 FALSE TRUE 1335.904258 3303.386895 3951.696919 4821.701014 4210.70925 4212.118617 3172.488013 2386.462667 3882.903499 3875.284548 0.344724172 0.852424346 1.019717874 1.244218574 1.086554858 1.086918538 0.818646469 0.615816113 1.001966036 1 11.92008653 -4.769799851 3.037900922 0.9799858 0.232929797 0.590401622 0.159413237 0.315057987 4.155280882 0.046495425 0.586039011 1.70E-05 4.769799851 -0.747056003 STPLAS(ph)PSPSPGR ddPTM_A459_MK2206_30min_R2 2 STPLASPSPSPGR 13 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 S(0.054)T(0.214)PLAS(0.722)PS(0.009)PS(0.001)PGR;S(0.134)T(0.021)PLAS(0.84)PS(0.004)PS(0.001)PGR 96.135 0.01443 10256500 33898 55906 34235 68367 58778 84058 61922 40699 66531 45846 TRUE FALSE 36493.25694 53129.78933 35376.37781 62781.1974 56470.08038 87256.88609 53791.56702 46018.49904 72317.74612 44350.04877 0.822845926 1.19796462 0.797662659 1.415583503 1.273281134 1.967458628 1.21288631 1.037620032 1.63061255 1 15.43664807 -5.772865767 24.99275377 1.379315584 0.965338423 0.313923828 0.285042155 256.8908853 561893.3038 0.079816295 0.119556945 1.69E-06 5.772865767 -0.413977161 STPLASPS(ph)PSPGRSPQR ddPTM_A459_MK2206_30min_R2 1 STPLASPSPSPGRSPQR 17 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 STPLASPS(0.604)PS(0.396)PGRSPQR 117.86 0.0074377 6884300 10791 17244 16550 15025 18832 17034 24688 16659 17167 14992 TRUE FALSE 11617.16726 16387.68804 17101.76874 13797.40944 18092.56106 17682.24081 21446.43594 18836.3885 18660.15463 14502.81227 0.80102859 1.129966225 1.179203621 0.951360962 1.247520875 1.219228414 1.47877774 1.298809372 1.286657669 1 13.82404506 -6.370859984 5.075403116 1.283497993 1.035938006 0.380714366 0.146666607 0.238357655 9.193358014 0.045540367 0.051796311 4.26E-07 6.370859984 -0.247559987 STPLASPSPSPGRS(ph)PQR ddPTM_A459_MK2206_30min_R1 2 STPLASPSPSPGRSPQR 17 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 STPLASPSPSPGRS(1)PQR;STPLASPSPS(0.005)PGRS(0.995)PQR 160.02 1.55E-05 55234000 7095.9 7638.1 7253.8 6515.5 8427.6 6553.9 7424.8 8420.2 5536.2 5301.3 TRUE FALSE 6492.356443 7140.858302 6761.432266 7017.324939 8091.910846 6924.976154 6929.505139 8346.583079 6111.707801 5958.065067 1.089675317 1.198519691 1.13483693 1.177785885 1.358144088 1.162286091 1.163046234 1.400888205 1.025787354 1 12.54062816 -4.760474135 24.31582774 1.195652221 1.089675171 0.035369186 0.119105692 50.64459939 1274853.034 0.027817217 0.164219923 1.74E-05 4.760474135 -0.10597705 STPLASPSPSPGRS(ph)PQR ddPTM_A459_MK2206_30min_R2 1 STPLASPSPSPGRSPQR 17 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 STPLASPS(0.02)PS(0.02)PGRS(0.96)PQR 109.67 0.0105 5326800 6549.6 13417 6970.2 13157 9364.4 13562 16031 12223 14468 12961 TRUE FALSE 7051.042412 12750.73129 7202.582989 12082.03101 8996.706604 14078.11141 13926.11044 13820.58807 15726.40049 12538.08363 0.562370026 1.01696014 0.574456448 0.963626609 0.717550374 1.122828004 1.110704861 1.102288713 1.254290604 1 13.61402924 -6.768081172 24.97303399 1.123958207 0.781107435 0.586312389 0.147149118 106.9138958 401991.9332 0.047247041 0.042617792 1.71E-07 6.768081172 -0.342850771 STPLSQPSANGVQT(ph)EGLDYDR ddPTM_A459_MK2206_30min_R2 1 STPLSQPSANGVQTEGLDYDR 21 0 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6 ENAH Protein enabled homolog 1 STPLSQPS(0.011)ANGVQT(0.987)EGLDY(0.002)DR 113.37 0.00020398 6828200 4358.5 5110.5 7078.2 5757.3 8676.6 5092.4 7634.6 2468.3 5214 6051.8 TRUE FALSE 4692.190111 4856.720001 7314.183655 5286.910173 8335.913088 5286.19485 6632.167849 2790.915285 5667.504295 5854.330262 0.801490504 0.829594468 1.249363006 0.903076857 1.423888424 0.90295467 1.132865341 0.476726655 0.968087559 1 12.51528842 -7.711192725 24.99999969 0.791797211 1.039945364 0.162888917 0.226319875 162.1097899 80656.6518 0.103483101 0.05974587 1.94E-08 7.711192725 0.248148153 STPMPSNTTPEPAPTPT(ph)VVT(ph)T(ph)T(ph)K ddPTM_A459_MK2206_30min_R1 1 STPMPSNTTPEPAPTPTVVTTTK 23 0 Q96F05 Q96F05 C11orf24 Uncharacterized protein C11orf24 4 S(0.005)T(0.005)PMPS(0.004)NT(0.005)T(0.005)PEPAPT(0.02)PT(0.989)VVT(0.989)T(0.989)T(0.989)K 47.32 0.029717 4079300 556.46 565.28 571.46 222.96 468.67 540 633.67 500.88 590.05 624.95 TRUE FALSE 509.1301549 528.4801693 532.6708874 240.1324178 450.0018815 570.5743333 591.3990305 496.500859 651.387809 702.3735241 0.724870937 0.752420402 0.758386911 0.341887058 0.640687421 0.81235171 0.842000745 0.706890055 0.927409401 1 9.456094653 -6.795939186 4.997669385 0.84113563 0.638701974 0.395734017 0.131780751 0.235231218 14.06640192 0.049063502 0.044466247 1.60E-07 6.795939186 -0.202433656 STPS(ph)PTPVESSDPK ddPTM_A459_MK2206_30min_R1 2 STPSPTPVESSDPK 14 0 Q9NW07 Q9NW07 ZNF358 Zinc finger protein 358 1 S(0.011)T(0.001)PS(0.985)PT(0.003)PVESSDPK;S(0.001)TPS(0.998)PT(0.001)PVESSDPK 214.48 1.16E-06 25785700 10238 11370.7 10675.7 8963 9381.1 7822.4 9874.7 8513.2 9052.6 8993.4 TRUE FALSE 9367.204338 10630.46536 9951.063228 9653.331813 9007.430922 8265.297528 9215.97678 8438.76999 9993.650165 10107.57029 0.926751343 1.051733014 0.984515857 0.955059578 0.891156892 0.817733371 0.911789532 0.834895999 0.988729228 1 13.30314862 -6.050083031 2.892629044 0.895111633 0.993334883 0.245267613 0.061355518 0.301115116 5.007821852 0.018124705 0.025998673 8.91E-07 6.050083031 0.09822325 STPS(ph)PTPVESSDPK ddPTM_A459_MK2206_30min_R2 2 STPSPTPVESSDPK 14 0 Q9NW07 Q9NW07 ZNF358 Zinc finger protein 358 1 S(0.012)T(0.012)PS(0.924)PT(0.051)PVESSDPK;S(0.128)T(0.002)PS(0.87)PTPVESSDPK 188.63 9.36E-05 33795000 125989 142632 121777 128165 127467 109006 146829 113772 95308 126696 TRUE FALSE 135634.8147 135549.1023 125836.9844 117693.5095 122462.0051 113154.2997 127550.1759 128642.391 103597.7176 122561.9199 1.106663594 1.105964254 1.026721713 0.960277953 0.999184781 0.923241899 1.040699885 1.049611422 0.845268397 1 16.90315128 -5.413452215 2.758488008 0.977907727 1.108920138 0.468597999 0.055764016 0.242407789 3.519893456 0.01514755 0.037869081 3.86E-06 5.413452215 0.131012411 STPS(ph)PVLQPR ddPTM_A459_MK2206_30min_R1 2 STPSPVLQPR 10 0 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L "Histone-lysine N-methyltransferase, H3 lysine-79 specific" 1 S(0.322)T(0.038)PS(0.64)PVLQPR;S(0.067)T(0.067)PS(0.866)PVLQPR 105.46 0.012497 23184000 7283.9 6807 6803.5 6201.7 8863.5 7992.7 8122 6305.9 6205.1 5848.5 TRUE FALSE 6664.366056 6363.863063 6341.697376 6679.356009 8510.448026 8445.239767 7580.196199 6250.768181 6850.14235 6573.056334 1.013891517 0.968174125 0.964801921 1.016172032 1.294747465 1.284826926 1.153222461 0.950968296 1.042154821 1 12.68234863 -6.021698311 24.50718015 1.130804424 0.982479198 0.271597682 0.104840955 822.4546128 928922.0344 0.034549713 0.045060747 9.51E-07 6.021698311 -0.148325226 STPSES(ph)PR ddPTM_A459_MK2206_30min_R2 1 STPSESPR 8 0 A8K855-2;A8K855 A8K855-2 EFCAB7 EF-hand calcium-binding domain-containing protein 7 1 STPSES(1)PR 84.817 0.036143 4227500 17057 21389 15514 21921 19230 19415 21413 14893 14732 21491 TRUE FALSE 18362.89703 20326.85336 16031.22902 20129.98418 18474.93358 20153.85143 18601.44738 16839.56624 16013.36273 20789.75043 0.883266834 0.977734362 0.771112143 0.968264831 0.888655861 0.96941286 0.894741254 0.809993669 0.770252764 1 14.34358482 -7.609775639 6.81143029 0.843288308 0.910135217 0.060745369 0.079364973 0.455929217 29.70707892 0.035905912 0.020540841 2.46E-08 7.609775639 0.06684691 STPSHGSVSSLNSTGS(ph)LSPK ddPTM_A459_MK2206_30min_R1 2 STPSHGSVSSLNSTGSLSPK 20 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 STPSHGSVSSLNS(0.003)T(0.009)GS(0.642)LS(0.347)PK;STPSHGSVSSLNS(0.099)T(0.16)GS(0.483)LS(0.259)PK 153.93 3.30E-06 43704000 11477.9 5999.2 6538.9 5246.9 17168.6 16628.4 15132 10828 5675.2 5057.8 TRUE FALSE 10501.64433 5608.65099 6095.057686 5651.017147 16484.73831 17569.88564 14122.57189 10733.33194 6265.157349 5684.398448 1.847450425 0.986674499 1.072243218 0.994127558 2.899996975 3.090896213 2.4844444 1.888208934 1.10216717 1 12.47279197 -6.241867593 24.73475579 2.193034569 1.197171696 0.26441811 0.67978813 906.8245716 1146041.31 0.21073516 0.271641479 5.73E-07 6.241867593 -0.995862873 STPSHGSVSSLNSTGS(ph)LSPK ddPTM_A459_MK2206_30min_R2 1 STPSHGSVSSLNSTGSLSPK 20 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 STPSHGSVSSLNS(0.001)T(0.008)GS(0.796)LS(0.195)PK 192.16 1.03E-15 47688000 8916.1 29922 17230 59232 60835 70574 51635 29313 56285 23482 TRUE FALSE 9598.723471 28436.11699 17804.4396 54392.55613 58446.31223 73259.74302 44855.26248 33144.30975 61180.56756 22715.78426 0.422557432 1.251821934 0.783791543 2.394482863 2.572938339 3.225058936 1.974629709 1.459087186 2.693306419 1 14.47140749 -5.760001117 24.99478106 2.25792611 0.862633167 0.500135375 0.624092312 30.83288214 535805.3477 0.172903238 0.279933396 1.74E-06 5.760001117 -1.395292944 STPSHGSVSSLNSTGSLS(ph)PK ddPTM_A459_MK2206_30min_R1 1 STPSHGSVSSLNSTGSLSPK 20 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 STPSHGSVSSLNST(0.001)GS(0.038)LS(0.961)PK 146 1.67E-05 9816600 4134.5 2240.4 2990.3 2260.7 5334.6 5117.8 4420 3630.9 2513.7 1692.6 TRUE FALSE 3782.839064 2094.549553 2787.326767 2434.819506 5122.111586 5407.565413 4125.149865 3599.155424 2775.00811 1902.292066 1.988569017 1.101066229 1.465246487 1.279939894 2.692599983 2.842657817 2.168515517 1.892009901 1.458770795 1 10.89352305 -6.234282078 24.81755476 2.103342356 1.433626901 0.181901858 0.549430152 1001.133715 914880.5845 0.165828852 0.214029252 5.83E-07 6.234282078 -0.669715456 STPSHGSVSSLNSTGSLS(ph)PK ddPTM_A459_MK2206_30min_R2 1 STPSHGSVSSLNSTGSLSPK 20 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 STPSHGSVSSLNSTGS(0.005)LS(0.995)PK 248.16 4.97E-38 47542000 23326 98363 65121 220700 208770 286990 183040 94999 176380 83560 TRUE FALSE 25111.85649 93478.43645 67292.10164 202668.104 200572.6408 297911.6056 159006.6281 107415.6955 191721.2136 80833.44404 0.310661717 1.156432682 0.832478468 2.507230843 2.481307622 3.685499351 1.967089613 1.328852145 2.371805579 1 16.3026647 -5.755079768 24.87213529 2.270337706 0.805514583 0.453880742 0.712352973 130.1707475 509084.5548 0.201595446 0.338517969 1.76E-06 5.755079768 -1.464823123 STQIENQHQGAQDTS(ph)DLMSPSKR ddPTM_A459_MK2206_30min_R2 1 STQIENQHQGAQDTSDLMSPSKR 23 1 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 STQIENQHQGAQDT(0.097)S(0.301)DLMS(0.301)PS(0.301)KR 51.469 0.025872 41179000 35608 38393 37139 43117 42489 29089 41663 32176 31604 43423 TRUE FALSE 38334.17586 36486.45945 38377.19572 39594.20318 40820.66837 30196.00228 36192.59805 36381.51368 34352.85879 42006.11107 0.91258569 0.868598842 0.913609824 0.942581976 0.97177928 0.718847842 0.86160316 0.866100497 0.817806217 1 15.35831161 STQIENQHQGAQDTSDLMS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 STQIENQHQGAQDTSDLMSPSK 22 0 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 STQIENQHQGAQDT(0.002)S(0.001)DLMS(0.793)PS(0.203)K 89.345 0.001616 0 20360 18443 15395 20009 18487 14187 23447 16064 11956 19251 TRUE FALSE 21918.77725 17527.14744 15908.26162 18374.20069 17761.10749 14726.89623 20368.38074 18163.61996 12995.91127 18622.84145 1.176983508 0.941163973 0.854233854 0.986648614 0.953727042 0.790797488 1.093731093 0.975340955 0.697847925 1 14.18478559 -4.764915752 5.114278746 0.921900379 1.191612206 0.338156553 0.107549389 0.190116167 13.66637258 0.026146957 0.18328031 1.72E-05 4.764915752 0.269711827 STQIENQHQGAQDTSDLMS(ph)PSKR ddPTM_A459_MK2206_30min_R1 4 STQIENQHQGAQDTSDLMSPSKR 23 1 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 STQIENQHQGAQDT(0.108)S(0.262)DLMS(0.481)PS(0.15)KR;STQIENQHQGAQDT(0.177)S(0.028)DLMS(0.686)PS(0.109)KR;STQIENQHQGAQDT(0.001)S(0.004)DLMS(0.862)PS(0.133)KR;STQIENQHQGAQDTS(0.001)DLMS(0.841)PS(0.157)KR 158.1 8.33E-10 40854300 4854.24 5236.01 4937.79 4470.38 4699.66 4021.92 4933.07 4934.46 4089.81 4265.91 TRUE FALSE 4441.361397 4895.144797 4602.626572 4814.689442 4512.462591 4249.637635 4603.993901 4891.318536 4514.960385 4794.403137 0.926363777 1.021012347 0.959999908 1.004231247 0.941193817 0.886374698 0.960285101 1.020214278 0.941714799 1 12.22713551 -9.261611238 0.795369434 1.00008388 0.962751181 0.065631365 0.040745358 9.89361215 8.034132212 0.054791258 0.0144472 5.48E-10 9.261611238 -0.037332698 STQIENQHQGAQDTSDLMS(ph)PSKR ddPTM_A459_MK2206_30min_R2 2 STQIENQHQGAQDTSDLMSPSKR 23 1 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 STQIENQHQGAQDT(0.293)S(0.214)DLMS(0.375)PS(0.117)KR;STQIENQHQGAQDT(0.005)S(0.036)DLMS(0.48)PS(0.48)KR 80.733 0.00027975 33137000 58251 66429 63833 65026 56280 53287 74024 57966 50656 63382 TRUE FALSE 62710.74135 63130.23246 65961.16036 59713.16779 54070.16442 55314.87412 64304.55988 65542.35523 55061.96731 61313.85053 1.022782631 1.029624333 1.075795433 0.973893619 0.881858894 0.902159523 1.04877706 1.068964918 0.898034732 1 15.90392539 -5.835687889 8.021595188 0.967306564 1.041244844 0.247115563 0.060067007 0.39146263 36.9929814 0.018469513 0.027539513 1.46E-06 5.835687889 0.07393828 STS(ph)ADSASSSDTSR ddPTM_A459_MK2206_30min_R2 2 STSADSASSSDTSR 14 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ST(0.003)S(0.996)ADS(0.001)AS(0.001)SSDTSR;S(0.092)T(0.092)S(0.816)ADSASSSDTSR 187.74 6.19E-15 0 17591.4 21252 18961.5 24116 20888.6 23124.6 20964 17933 20415.8 21441.1 TRUE FALSE 18938.21111 20196.65658 19593.66695 22145.64566 20068.40861 24004.62286 18211.40162 20276.90467 22191.52938 20741.47866 0.913059836 0.973732727 0.944661047 1.0676985 0.967549563 1.157324569 0.878018482 0.977601694 1.069910672 1 14.34023113 -5.725396282 24.50027896 1.013950206 0.946809221 0.180205089 0.071127668 268.602148 182579.7077 0.019000839 0.032908524 1.88E-06 5.725396282 -0.067140986 STS(ph)DTDLVTSDSR ddPTM_A459_MK2206_30min_R1 3 STSDTDLVTSDSR 13 0 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 S(0.002)T(0.123)S(0.875)DTDLVTSDSR;S(0.002)T(0.073)S(0.914)DT(0.011)DLVTSDSR;S(0.001)T(0.056)S(0.943)DTDLVTSDSR 290.1 1.38E-60 42196000 5991.7 6009.7 5983.7 5211.5 6668.2 6074.7 6551.7 6201.2 5568.6 5052.3 TRUE FALSE 5482.074451 5618.467438 5577.543116 5612.890633 6402.591474 6418.644264 6114.648047 6146.983562 6147.475897 5678.217067 0.965457006 0.989477396 0.982270147 0.988495256 1.127570749 1.130397832 1.076860566 1.082555226 1.082641932 1 12.47122229 -6.240880325 18.62470005 1.089494531 0.982059906 0.677454131 0.034291417 17.4158669 15776.30292 0.009911685 0.012747471 5.74E-07 6.240880325 -0.107434625 STS(ph)DTDLVTSDSR ddPTM_A459_MK2206_30min_R2 3 STSDTDLVTSDSR 13 0 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 ST(0.001)S(0.999)DTDLVTSDSR;S(0.001)T(0.063)S(0.927)DT(0.009)DLVTSDSR;ST(0.001)S(0.97)DT(0.028)DLVTSDSR 286.53 6.40E-50 99264000 239480 305605 263953 352366 273324 355184 302363 247907 294145 281960 TRUE FALSE 257814.7729 290429.1001 272753.0613 323576.5706 262591.9264 368700.776 262662.3749 280309.2961 319729.2004 272759.6683 0.945208559 1.064780222 0.999975777 1.186306512 0.962722708 1.35174228 0.962980988 1.027678681 1.172201163 1 18.05727081 -3.841131731 0.950238102 1.092229818 0.314018879 0.1130694 0.116656903 22.45318935 4.235858827 0.036479559 27.44640037 0.000144168 3.841131731 -0.778210939 STS(ph)EGAWPQLPSGLSMMR ddPTM_A459_MK2206_30min_R1 1 STSEGAWPQLPSGLSMMR 18 0 G3V1A6;P57764 G3V1A6 GSDMD Gasdermin-D 1 S(0.005)T(0.114)S(0.881)EGAWPQLPSGLSMMR 163.34 5.26E-06 29909000 1898.8 2054.6 1966 1656.8 1801.2 2062.5 1570.7 1754.5 1776.2 1356.7 TRUE FALSE 1737.297089 1920.845167 1832.553398 1784.407023 1729.45439 2179.276968 1465.921469 1739.160591 1960.842346 1524.778239 1.139376891 1.259753791 1.201849129 1.170273144 1.13423339 1.429241914 0.961399784 1.140599038 1.285985264 1 10.57438372 -13.79498197 0.311224514 9.68E-12 1.199199246 0.1916004 0.115553374 307.5842221 4.298186874 199.0560549 0.10671925 1.60E-14 13.79498197 1.199199246 STS(ph)FGVPNANSIK ddPTM_A459_MK2206_30min_R2 3 STSFGVPNANSIK 13 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6;P53814-2;H7BZZ8;A0A096LNK9;B5MCI0 A0A087WVP4 SMTN Smoothelin 1 ST(0.002)S(0.998)FGVPNANSIK;S(0.008)T(0.008)S(0.983)FGVPNANSIK;ST(0.001)S(0.999)FGVPNANSIK 201.76 8.89E-05 31493700 198523 251650 231844 228603 238740 210529 237764 198205 223327 223143 TRUE FALSE 213722.0735 239153.4269 239573.5632 209925.4036 229365.868 218540.8286 206545.3012 224111.074 242751.5788 215861.8622 0.990087232 1.107900323 1.109846644 0.972498808 1.062558553 1.012410559 0.956840171 1.038215235 1.124569094 1 17.71974885 -5.75084159 24.99953898 1.023804237 1.073140277 0.128240965 0.053971713 426.8409187 1006881.794 0.014852395 0.025387474 1.77E-06 5.75084159 0.04933604 STS(ph)FRGGMGSGGLATGIAGGLAGMGGIQNEK ddPTM_A459_MK2206_30min_R1 8 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.102)T(0.196)S(0.604)FRGGMGS(0.049)GGLAT(0.049)GIAGGLAGMGGIQNEK;S(0.224)T(0.224)S(0.441)FRGGMGS(0.103)GGLAT(0.008)GIAGGLAGMGGIQNEK;S(0.097)T(0.107)S(0.68)FRGGMGS(0.057)GGLAT(0.058)GIAGGLAGMGGIQNEK;S(0.191)T(0.22)S(0.572)FRGGMGS(0.017)GGLATGIAGGLAGMGGIQNEK;S(0.065)T(0.076)S(0.528)FRGGMGS(0.319)GGLAT(0.011)GIAGGLAGMGGIQNEK;S(0.117)T(0.117)S(0.727)FRGGMGS(0.019)GGLAT(0.019)GIAGGLAGMGGIQNEK;S(0.191)T(0.191)S(0.594)FRGGMGS(0.016)GGLAT(0.008)GIAGGLAGMGGIQNEK;S(0.397)T(0.115)S(0.488)FRGGMGSGGLATGIAGGLAGMGGIQNEK 140.68 9.02E-19 1609486000 34587.7 29567.7 40219.6 31265.7 38110.6 28655.4 25872.1 31734.3 21326.5 11075.32 TRUE FALSE 31645.83449 27642.83736 37489.60561 33673.78963 36592.5741 30277.84398 24146.21942 31456.85036 23543.46599 12447.41426 2.542362119 2.220769454 3.011838832 2.70528392 2.939773141 2.432460539 1.939858264 2.527179518 1.891434278 1 13.60355846 -8.78336708 0.566982228 0.959757661 2.666262364 0.754491011 0.280143073 0.647131623 0.437068141 0.34964037 0.136927819 1.65E-09 8.78336708 1.706504704 STS(ph)FRGGMGSGGLATGIAGGLAGMGGIQNEK ddPTM_A459_MK2206_30min_R2 10 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.075)T(0.189)S(0.52)FRGGMGS(0.152)GGLAT(0.064)GIAGGLAGMGGIQNEK;S(0.184)T(0.184)S(0.505)FRGGMGS(0.051)GGLAT(0.077)GIAGGLAGMGGIQNEK;S(0.044)T(0.182)S(0.724)FRGGMGS(0.038)GGLAT(0.012)GIAGGLAGMGGIQNEK;S(0.023)T(0.117)S(0.628)FRGGMGS(0.12)GGLAT(0.112)GIAGGLAGMGGIQNEK;S(0.163)T(0.163)S(0.542)FRGGMGS(0.127)GGLAT(0.006)GIAGGLAGMGGIQNEK;S(0.214)T(0.214)S(0.562)FRGGMGS(0.009)GGLAT(0.001)GIAGGLAGMGGIQNEK;S(0.029)T(0.086)S(0.774)FRGGMGS(0.097)GGLAT(0.014)GIAGGLAGMGGIQNEK;S(0.396)T(0.148)S(0.447)FRGGMGS(0.004)GGLAT(0.006)GIAGGLAGMGGIQNEK;S(0.188)T(0.188)S(0.36)FRGGMGS(0.065)GGLAT(0.199)GIAGGLAGMGGIQNEK;S(0.227)T(0.177)S(0.592)FRGGMGS(0.004)GGLAT(0.001)GIAGGLAGMGGIQNEK 95.674 2.93E-08 575371700 357710.9 874746 627806.8 729592.7 879180 876349 921449 688356 1073671 530863.7 TRUE FALSE 385097.5215 831307.3856 648737.5654 669982.6426 844658.9757 909699.0753 800461.6394 778326.4927 1167056.963 513541.6609 0.749885649 1.61877302 1.263261805 1.304631529 1.64477206 1.771422154 1.558708281 1.515605358 2.272565308 1 18.97012179 -4.255532901 0.646461976 1.640418164 9.44E-13 0.291866513 0.337353526 8.071075563 1.566224724 0.144998588 11.38926865 5.55E-05 4.255532901 -1.640418164 STS(ph)GPRPGCQPSSPCVPK ddPTM_A459_MK2206_30min_R2 1 STSGPRPGCQPSSPCVPK 18 1 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 S(0.31)T(0.31)S(0.381)GPRPGCQPSSPCVPK 67.785 0.01585 7602700 16539 15142 20873 20544 15583 17560 18020 13496 15200 20122 TRUE FALSE 17805.23856 14390.0703 21568.8954 18865.48948 14971.13312 18228.2581 15653.95235 15259.97354 16522.06852 19465.42079 0.914711208 0.739263253 1.108062119 0.969179639 0.769114281 0.936443055 0.804192857 0.783952924 0.84879072 1 14.24862591 -6.242713754 24.64595822 0.847603509 0.931498143 0.104665478 0.106322999 1551.809688 2042432.211 0.031638098 0.040762249 5.72E-07 6.242713754 0.083894634 STS(ph)LSALVR ddPTM_A459_MK2206_30min_R1 4 STSLSALVR 9 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5;A0A0A0MRX3 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.01)T(0.036)S(0.943)LS(0.01)ALVR;S(0.002)T(0.027)S(0.968)LS(0.002)ALVR;S(0.003)T(0.04)S(0.957)LSALVR;S(0.303)T(0.156)S(0.541)LS(0.001)ALVR 169.99 0.00066331 120242000 19439.7 15447.9 16477.9 13339.5 15094 10663.1 12466.8 11809.5 11142.8 9200.5 TRUE FALSE 17786.25143 14442.2389 15359.42606 14366.9106 14492.77402 11266.83551 11635.16252 11706.25079 12301.13393 10340.3274 1.720085907 1.396690679 1.485390691 1.389405775 1.401577867 1.089601429 1.125221869 1.132096725 1.189627123 1 13.33599425 -3.087048714 0.221824231 0.98500902 2.999016202 0.836602351 0.085098366 10.26687865 0.239325999 0.142955335 6.437075757 0.000818373 3.087048714 2.014007182 STS(ph)LSALVR ddPTM_A459_MK2206_30min_R2 3 STSLSALVR 9 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5;A0A0A0MRX3 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.018)T(0.027)S(0.949)LS(0.006)ALVR;S(0.011)T(0.037)S(0.952)LSALVR;S(0.181)T(0.181)S(0.629)LS(0.008)ALVR 143.5 0.0020277 51778000 188972 220486 185589 192550 153862 138071 150503 93732 106147 127073 TRUE FALSE 203439.8416 209536.9859 191776.4446 176818.0491 147820.6048 143325.3887 130741.7753 105983.0942 115379.4742 122926.6184 1.654969804 1.704569674 1.560088833 1.438403263 1.202510951 1.165942662 1.06357579 0.862165539 0.938604475 1 16.90743782 -6.306713183 0.744062158 0.924599814 1.732823592 0.966339642 0.053659725 0.119967929 0.144355286 0.033031404 0.055261402 4.93E-07 6.306713183 0.808223778 STS(ph)PAGQHHS(ph)PISSR ddPTM_A459_MK2206_30min_R2 1 STSPAGQHHSPISSR 15 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 S(0.119)T(0.143)S(0.738)PAGQHHS(0.964)PIS(0.032)S(0.004)R 92.098 0.018199 0 30279 40032 41384 43619 46564 42849 39995 34002 35026 40155 TRUE FALSE 32597.18352 38044.06909 42763.72191 40055.18817 44735.66339 44479.64872 34743.60846 38446.17815 38072.49817 38844.74564 0.839165838 0.979387777 1.100888195 1.031161036 1.151652885 1.14506217 0.894422344 0.989739475 0.980119641 1 15.24543184 -10.71492662 14.53069111 0.999999972 1.01844447 0 0.09595609 0 0 0.098519405 0.023894466 1.93E-11 10.71492662 0.018444498 STS(ph)PASEKADPGAVK ddPTM_A459_MK2206_30min_R1 1 STSPASEKADPGAVK 15 1 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;A0A087WYS3;Q9ULU4-8;Q9ULU4-17;Q9ULU4-2;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 S(0.058)T(0.049)S(0.858)PAS(0.035)EKADPGAVK 128.45 0.0052694 0 1239.7 977.21 1059.2 1380.7 1278.9 619.8 754.5 1189.1 610.03 295.57 TRUE FALSE 1134.257005 913.5934514 987.3044551 1487.041753 1227.958705 654.8925404 704.1686817 1178.703824 673.4448015 332.187443 3.414508973 2.750234756 2.972130572 4.476514042 3.696583753 1.971454834 2.119793196 3.548309392 2.027303607 1 8.375853729 -6.759178782 24.99902785 2.291792796 3.451599849 0.447949092 0.726867562 67.56180922 747140.4075 0.253684383 0.24211593 1.74E-07 6.759178782 1.159807053 STS(ph)PFGIPEEASEMLEAKPK ddPTM_A459_MK2206_30min_R1 2 STSPFGIPEEASEMLEAKPK 20 1 Q96D09 Q96D09 GPRASP2 G-protein coupled receptor-associated sorting protein 2 1 S(0.179)T(0.179)S(0.641)PFGIPEEASEMLEAKPK;S(0.18)T(0.18)S(0.639)PFGIPEEASEMLEAKPK 84.025 0.0014726 137201000 7598.6 8014.2 9096.8 8215.1 8178.8 7448 7610.1 8483.9 7638.9 7484.6 TRUE FALSE 6952.299168 7492.474123 8479.334561 8847.828425 7853.021077 7869.699324 7102.444114 8409.726157 8432.990991 8411.848754 0.826488846 0.890704807 1.008022708 1.051829233 0.933566604 0.935549313 0.844338067 0.999747666 1.002513388 1 13.0382072 -5.020180811 3.9334727 0.967286041 0.834419528 0.428360753 0.054456508 0.217191047 7.459973421 0.015275002 0.058381162 9.55E-06 5.020180811 -0.132866514 STS(ph)PFGIPEEASEMLEAKPK ddPTM_A459_MK2206_30min_R2 2 STSPFGIPEEASEMLEAKPK 20 1 Q96D09 Q96D09 GPRASP2 G-protein coupled receptor-associated sorting protein 2 1 S(0.166)T(0.166)S(0.668)PFGIPEEASEMLEAKPK;S(0.17)T(0.17)S(0.66)PFGIPEEASEMLEAKPK 81.643 0.0019914 16708000 71422 79422 90049 87296 75499 68385 94925 76382 82577 89087 TRUE FALSE 76890.12323 75478.01897 93051.18872 80163.63755 72534.52991 70987.43909 82461.23347 86365.38966 89759.39819 86180.09849 0.892202777 0.875817274 1.079729431 0.930187351 0.841662184 0.82371035 0.956847752 1.002150046 1.041532787 1 16.39506713 -7.648760041 3.504870773 1.017675451 0.910487973 0.340622781 0.0665071 0.310521581 7.362608474 0.038761993 0.020441366 2.25E-08 7.648760041 -0.107187478 STS(ph)PIIGS(ph)PPVR ddPTM_A459_MK2206_30min_R2 1 STSPIIGSPPVR 12 0 Q86TB9-4;Q86TB9;Q86TB9-2 Q86TB9-4 PATL1 Protein PAT1 homolog 1 2 S(0.002)T(0.08)S(0.919)PIIGS(1)PPVR 141.73 0.017612 8791800 11495 16562 14463 18551 23455 27706 42041 31229 35696 43378 TRUE FALSE 12375.06604 15739.55516 14945.1892 17035.32396 22534.03885 28760.37124 36520.9662 35310.73753 38800.77356 41962.57941 0.294907182 0.375085502 0.35615516 0.405964652 0.537003186 0.685381396 0.870322242 0.841481578 0.924651775 1 15.35681574 -6.839115459 0.84238845 0.95423142 0.318987425 0.98411495 0.03189375 0.068175114 0.104190672 0.021400551 0.018625519 1.45E-07 6.839115459 -0.635243996 down STS(ph)PIIGSPPVR ddPTM_A459_MK2206_30min_R1 3 STSPIIGSPPVR 12 0 Q86TB9-4;Q86TB9;Q86TB9-2 Q86TB9-4 PATL1 Protein PAT1 homolog 1 1 S(0.022)T(0.022)S(0.956)PIIGSPPVR;S(0.002)T(0.002)S(0.997)PIIGSPPVR;S(0.023)T(0.023)S(0.954)PIIGSPPVR 215.77 2.16E-07 289089000 19954.6 21161.4 19577.8 14823.1 17255.1 12559.8 12680.6 9419.6 10321.5 10356.6 TRUE FALSE 18257.35648 19783.78901 18248.91348 15964.77773 16567.79283 13270.92502 11834.70031 9337.24543 11394.45686 11639.6538 1.568548069 1.699688785 1.567822704 1.371585273 1.423392235 1.140147744 1.016757072 0.802192711 0.978934345 1 13.50676053 -6.694360543 0.93689646 0.899943455 1.623147379 0.919743193 0.082694031 0.138418676 0.26393053 0.048413816 0.047780334 2.02E-07 6.694360543 0.723203924 STS(ph)PIIGSPPVR ddPTM_A459_MK2206_30min_R2 1 STSPIIGSPPVR 12 0 Q86TB9-4;Q86TB9;Q86TB9-2 Q86TB9-4 PATL1 Protein PAT1 homolog 1 1 S(0.005)T(0.017)S(0.978)PIIGSPPVR 93.839 0.019749 47143000 96937 89719 93778 116520 81891 63775 78467 50183 41745 55403 TRUE FALSE 104358.5713 85263.68492 96904.51171 106999.9433 78675.54787 66202.00231 68164.18864 56742.0904 45375.90464 53595.20465 1.947162474 1.59088272 1.808081756 1.996446211 1.467958717 1.235222493 1.271833723 1.058715808 0.84664113 1 15.7098163 -6.859447083 1.078728782 0.982882142 1.829052955 0.864683907 0.141707546 0.183380018 0.450098544 0.084750007 0.069592824 1.38E-07 6.859447083 0.846170813 STS(ph)PPPS(ph)PEVWADSR ddPTM_A459_MK2206_30min_R2 2 STSPPPSPEVWADSR 15 0 Q08495;Q08495-2;E5RGQ0;Q08495-3;E5RFK4;E5RJ61;E5RGQ7;E5RJC0 Q08495 DMTN Dematin 2 S(0.058)T(0.047)S(0.895)PPPS(1)PEVWADSR;S(0.198)T(0.273)S(0.529)PPPS(1)PEVWADSR 128.82 0.01705 15509500 17573 21558.5 16940.3 16830 17712.7 16579.3 19290.7 12648.1 13812.3 13510.5 TRUE FALSE 18918.40239 20487.93624 17505.08115 15454.93516 17017.2104 17210.23688 16757.80792 14301.2501 15013.66889 13069.65349 1.447506042 1.567595977 1.33936842 1.182505349 1.302039906 1.316808964 1.282192212 1.094233302 1.148742688 1 13.67393327 -1.522878745 0.127329466 0.907911248 2.914278527 0.759447624 0.078223053 44.24649507 0.384333098 0.48680791 15.87627902 0.03 1.522878745 2.006367279 STS(ph)PPPSPEVWADSR ddPTM_A459_MK2206_30min_R1 3 STSPPPSPEVWADSR 15 0 Q08495;Q08495-2;E5RGQ0;Q08495-3;E5RFK4;E5RJ61;E5RGQ7;E5RJC0 Q08495 DMTN Dematin 1 S(0.008)T(0.008)S(0.984)PPPSPEVWADSR;S(0.001)T(0.01)S(0.989)PPPSPEVWADSR;S(0.018)T(0.018)S(0.963)PPPSPEVWADSR 211.82 8.86E-07 87940500 11922.3 11783.8 12727.1 11981.2 16759.4 14628.1 16252.4 14668.9 14830.9 14030.3 TRUE FALSE 10908.24578 11016.67248 11863.21991 12903.9941 16091.83761 15456.33038 15168.23205 14540.65135 16372.62513 15768.47949 0.691775373 0.69865154 0.752337594 0.818341052 1.020506614 0.980204235 0.961933715 0.922134018 1.0383135 1 13.94475593 -5.993462369 2.242427972 0.982241636 0.706133604 0.926417101 0.03489072 0.076017439 0.768004469 0.011134651 0.017352829 1.02E-06 5.993462369 -0.276108032 STS(ph)PPPSPEVWADSR ddPTM_A459_MK2206_30min_R2 2 STSPPPSPEVWADSR 15 0 Q08495;Q08495-2;E5RGQ0;Q08495-3;E5RFK4;E5RJ61;E5RGQ7;E5RJC0 Q08495 DMTN Dematin 1 S(0.001)T(0.001)S(0.999)PPPSPEVWADSR;ST(0.008)S(0.992)PPPSPEVWADSR 219.84 2.31E-09 76956000 86443 117171 99019 141407 112818 135725 135617 122829 130228 121336 TRUE FALSE 93061.14254 111352.4585 102320.244 129853.5958 108388.1985 140890.11 117810.325 138883.172 141554.996 117376.8163 0.792840916 0.948675063 0.871724479 1.106296796 0.923420842 1.200323151 1.003693308 1.183224903 1.205987695 1 16.84078796 -5.427123814 0.582640316 1.12839611 0.743787527 0.521414372 0.095291111 1.53678376 0.660593738 0.053906882 0.363137006 3.74E-06 5.427123814 -0.384608583 STS(ph)PSAAGGQQK ddPTM_A459_MK2206_30min_R1 3 STSPSAAGGQQK 12 0 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 S(0.128)T(0.128)S(0.74)PS(0.003)AAGGQQK;S(0.014)T(0.024)S(0.962)PSAAGGQQK;S(0.33)T(0.052)S(0.619)PSAAGGQQK 179.6 0.00010389 10212000 16506.3 15573.4 9769.3 8759.8 6462.9 7937.6 14289.4 14282.8 1036.13 8658.7 TRUE FALSE 15102.35251 14559.56883 9106.187135 9434.481314 6205.469008 8387.020052 13336.1802 14157.92699 1143.839421 9731.405126 1.551919 1.496142504 0.935752547 0.969488084 0.637674511 0.861850878 1.370426986 1.454869754 0.117541034 1 13.24843242 -5.248602118 5.600475213 0.939521577 1.532767561 0.321942881 0.350654636 0.199876697 23.36905003 0.091547968 0.230252203 5.64E-06 5.248602118 0.593245983 STS(ph)PSAAGGQQK ddPTM_A459_MK2206_30min_R2 2 STSPSAAGGQQK 12 0 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 S(0.114)T(0.114)S(0.757)PS(0.015)AAGGQQK;S(0.023)T(0.023)S(0.948)PS(0.007)AAGGQQK 87.149 0.028915 26568000 172720 112005 139982 140497 147704 107531 152804 158251 139948 175609 TRUE FALSE 185943.576 106442.9946 144648.93 129017.9457 141904.3988 111623.1676 132740.6512 178934.9491 152120.4241 169878.8927 1.094565505 0.626581636 0.851482652 0.759470136 0.835326841 0.657074965 0.781384015 1.053308897 0.895463949 1 17.37414708 -7.749278357 24.80076595 0.980789811 0.790292024 0.305006969 0.125236006 216.9990823 442542.7224 0.055815169 0.031912505 1.78E-08 7.749278357 -0.190497787 STS(ph)PTFNK ddPTM_A459_MK2206_30min_R1 4 STSPTFNK 8 0 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 S(0.008)T(0.008)S(0.97)PT(0.014)FNK;S(0.006)T(0.006)S(0.924)PT(0.065)FNK;S(0.067)T(0.067)S(0.8)PT(0.067)FNK;S(0.079)T(0.079)S(0.828)PT(0.014)FNK 128.86 0.0042224 72786000 42826.1 46706.2 46128.8 40090.5 46718.3 40467.8 44729.9 40854.1 36341.8 32599.7 TRUE FALSE 39183.51531 43665.61789 42997.70558 43178.27726 44857.41118 42759.05186 41746.04999 40496.91691 40119.66016 36638.39695 1.069465876 1.191799356 1.173569511 1.178497993 1.224327889 1.167055751 1.13940711 1.105313558 1.095016799 1 15.16106876 -8.407659309 0.907080651 1.003235057 1.171281423 0.638199406 0.038340006 0.354725152 0.643997215 0.03677511 0.012976837 3.91E-09 8.407659309 0.168046367 STS(ph)PTFNK ddPTM_A459_MK2206_30min_R2 1 STSPTFNK 8 0 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 S(0.043)T(0.076)S(0.88)PT(0.002)FNK 117.53 0.0088168 32092000 305880 431020 393780 433030 435350 346910 434880 331650 374320 411610 TRUE FALSE 329298.408 409616.1736 406908.4287 397650.0638 418255.9715 360111.9031 377779.7336 374997.7937 406877.677 398179.1994 0.827010573 1.028723183 1.021922866 0.998671112 1.050421449 0.904396572 0.948768128 0.941781475 1.021845635 1 18.60305833 -5.272087952 0.003288207 1.940226179 2.86E-05 0.032977462 0.064355954 380464.7948 230.2786439 66570.7139 69320.49225 5.34E-06 5.272087952 -1.940197568 STS(ph)PTLTPSPSPK ddPTM_A459_MK2206_30min_R1 2 STSPTLTPSPSPK 13 0 H7C163;A0A0A0MRS7;Q68DC2;Q68DC2-4 H7C163 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 1 ST(0.013)S(0.983)PT(0.004)LTPSPSPK;S(0.003)T(0.003)S(0.962)PT(0.022)LT(0.01)PSPSPK 145.81 0.00061704 17790800 8130 8266 7528.5 6422.8 7363 6628.6 7360.8 7044.3 6281.5 5882.2 TRUE FALSE 7438.500808 7727.881898 7017.486396 6917.485169 7069.716119 7003.905604 6869.774463 6982.712428 6934.484404 6610.931344 1.125181978 1.168955098 1.061497394 1.046370747 1.069397903 1.059443101 1.039153805 1.056237323 1.04894213 1 12.69063782 -1.522878745 0.312267827 1.028837496 2.202157207 0.680220547 0.025290978 32.27799989 0.460896517 0.024795212 21.44775668 0.03 1.522878745 1.17331971 STS(ph)PVTDPSIPIR ddPTM_A459_MK2206_30min_R1 2 STSPVTDPSIPIR 13 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 ST(0.026)S(0.959)PVT(0.015)DPSIPIR;S(0.017)T(0.057)S(0.909)PVT(0.017)DPSIPIR 171.62 0.00019707 64200000 10266.6 10960.9 11205.6 9259.7 10905.8 10148.2 10949.3 10130.1 9805.8 8350 TRUE FALSE 9393.371758 10247.34342 10444.99509 9972.883698 10471.39889 10722.78231 10218.89218 10041.5336 10825.148 9384.461039 1.000949518 1.091947995 1.113009586 1.062701806 1.115823152 1.14261035 1.088916256 1.070017081 1.153518349 1 13.19605818 -4.762764588 5.424559877 1.097474071 0.99614215 0.302990564 0.041586357 0.173448221 15.75296298 0.009657064 0.066194541 1.73E-05 4.762764588 -0.101331921 STS(ph)PVTDPSIPIR ddPTM_A459_MK2206_30min_R2 3 STSPVTDPSIPIR 13 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.064)T(0.064)S(0.851)PVT(0.02)DPSIPIR;S(0.246)T(0.003)S(0.548)PVT(0.204)DPSIPIR;STS(0.987)PVT(0.013)DPSIPIR 203.88 4.89E-05 39549200 133741 173599 164867 194438 188296 174801 189934 150544 152359 163804 TRUE FALSE 143980.3138 164978.3261 170363.5835 178551.7934 180902.5529 181453.1745 164995.4376 170220.6177 165610.9104 158459.0889 0.908627677 1.041141453 1.075126613 1.126800581 1.1416357 1.145110551 1.04124944 1.074224387 1.045133552 1 17.27375089 -4.71357795 2.020723587 1.08855446 0.834607826 0.571931835 0.044491934 0.66321127 2.570643205 0.012381934 0.333939314 1.93E-05 4.71357795 -0.253946634 STS(ph)QELAK ddPTM_A459_MK2206_30min_R2 2 STSQELAK 8 0 E7EV90;Q5BKX6-2;Q5BKX6;Q5BKX6-3 E7EV90 SLC45A4 Solute carrier family 45 member 4 1 S(0.093)T(0.057)S(0.849)QELAK;S(0.158)T(0.02)S(0.823)QELAK 120.86 0.0071807 12840700 192346 97420 116254 124012 116749 128172 211302 115232 165837 183885 TRUE FALSE 207072.1576 92582.26446 120129.8503 113879.8229 112164.8476 133049.6753 183557.7936 130293.2181 180261.2025 177884.8475 1.1640798 0.520461781 0.675323683 0.640188439 0.63054751 0.747953955 1.031891115 0.732458216 1.013358951 1 17.4405841 -7.109058352 6.116877135 0.9210167 0.705461542 0.250816683 0.178358305 0.339191855 16.38393984 0.066079943 0.051144612 7.78E-08 7.109058352 -0.215555158 STS(ph)QGSINSPVYSR ddPTM_A459_MK2206_30min_R1 1 STSQGSINSPVYSR 14 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 ST(0.008)S(0.992)QGSINSPVYSR 148.18 0.00046436 17463000 3243.1 3071 3441.6 2751.5 3119.7 2742.2 3801.8 2846 3049.1 2644.8 TRUE FALSE 2967.257315 2871.077342 3207.993781 2963.421007 2995.435743 2897.460994 3548.188859 2821.117722 3366.064856 2972.457791 0.998250446 0.965893393 1.079239473 0.996959827 1.007730287 0.974769432 1.193688559 0.949085881 1.13241805 1 11.53744061 STS(ph)QGSINSPVYSR ddPTM_A459_MK2206_30min_R2 1 STSQGSINSPVYSR 14 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 S(0.003)T(0.096)S(0.901)QGSINSPVYSR 172.43 0.00012279 7930900 14706 19677 15971 20928 15900 20515 21518 14168 17316 17653 TRUE FALSE 15831.90267 18699.86879 16503.46517 19218.11545 15275.68611 21295.7127 18692.66075 16019.80625 18822.11438 17076.98406 0.927090089 1.095033452 0.966415681 1.125381121 0.894518965 1.247041786 1.094611361 0.938093412 1.102191951 1 14.05976558 -4.748761208 24.82096357 1.05174767 0.927089768 0.125060476 0.098698931 1223.91866 2395995.286 0.023546484 0.416459836 1.78E-05 4.748761208 -0.124657902 STS(ph)SHGTDEMESSSYR ddPTM_A459_MK2206_30min_R1 1 STSSHGTDEMESSSYR 16 0 A0A0D9SGE8;Q5JRC6;Q8IWS0-2;Q8IWS0-3;Q8IWS0-4;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 1 S(0.03)T(0.012)S(0.855)S(0.101)HGT(0.002)DEMESSSYR 173.19 5.00E-06 6398600 1082.3 750.47 1079.1 643.11 1525.7 1443.7 1628 1424.3 698.89 924.91 TRUE FALSE 990.2447016 701.6142666 1005.853699 692.6424436 1464.928138 1525.441046 1519.39909 1411.847495 771.5421165 1039.494834 0.95262109 0.674956954 0.967637035 0.666326009 1.409269283 1.467483048 1.461670651 1.358205399 0.742227947 1 10.02166687 -6.263002297 24.96830059 1.28019641 0.816229798 0.43778585 0.232944299 123.5951745 1974485.438 0.071527386 0.085476679 5.46E-07 6.263002297 -0.463966612 STS(ph)SHGTDEMESSSYR ddPTM_A459_MK2206_30min_R2 1 STSSHGTDEMESSSYR 16 0 A0A0D9SGE8;Q5JRC6;Q8IWS0-2;Q8IWS0-3;Q8IWS0-4;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 1 S(0.001)T(0.021)S(0.873)S(0.106)HGTDEMESSSYR 165.89 1.39E-05 0 15989 19818 18659 19824 23648 20952 22802 17046 15579 17495 TRUE FALSE 17213.13013 18833.86694 19281.08175 18204.31579 22719.4607 21749.34304 19808.07001 19273.97073 16934.03326 16924.13958 1.017075642 1.11284044 1.13926511 1.075642026 1.342429291 1.285107756 1.17040337 1.13884494 1.00058459 1 14.04679487 -8.214254665 3.465577361 0.994835759 1.167924766 0.341467858 0.089116925 0.293912252 6.814963631 0.082993726 0.025566472 6.11E-09 8.214254665 0.173089006 STS(ph)SSSDTMSTFKPMVAPR ddPTM_A459_MK2206_30min_R2 1 STSSSSDTMSTFKPMVAPR 19 1 Q7Z6B7;Q7Z6B7-2;G5EA48 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 S(0.141)T(0.141)S(0.598)S(0.103)S(0.007)S(0.007)DT(0.002)MSTFKPMVAPR 106.19 0.00045766 10806000 22251 22554 20053 21395 21493 17084 22818 18874 18895 22116 TRUE FALSE 23954.55367 21434.00116 20721.55701 19646.96006 20649.07683 17734.14359 19821.96919 21340.8966 20538.45295 21394.35673 1.119666928 1.001853032 0.968552468 0.918324412 0.96516465 0.828916887 0.926504566 0.997501204 0.959993946 1 14.38494268 -4.598503288 1.344929275 0.93817708 1.262154313 0.568170007 0.046301449 1.465984294 1.738238873 0.014077913 0.729762054 2.52E-05 4.598503288 0.323977233 STS(ph)TPNVHMVSTTLPVDSR ddPTM_A459_MK2206_30min_R1 5 STSTPNVHMVSTTLPVDSR 19 0 H7C155;P04049;P04049-2 H7C155 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 S(0.07)T(0.07)S(0.767)T(0.094)PNVHMVSTTLPVDSR;STS(0.924)T(0.076)PNVHMVSTTLPVDSR;S(0.085)T(0.085)S(0.501)T(0.329)PNVHMVSTTLPVDSR;S(0.114)T(0.114)S(0.62)T(0.153)PNVHMVSTTLPVDSR;S(0.098)T(0.098)S(0.578)T(0.227)PNVHMVSTTLPVDSR 340.48 1.07E-173 253442000 10990.2 9124.1 9853.9 8907.8 13648.7 11067.1 12748.3 11450.8 8628.8 8336.9 TRUE FALSE 10055.42578 8530.119432 9185.044723 9593.880299 13105.04338 11693.70964 11897.88417 11350.68686 9525.794638 9369.738112 1.073181092 0.910390379 0.980288308 1.023921927 1.398656315 1.248029507 1.269820354 1.211419863 1.016655378 1 13.19379301 -6.033001986 20.09322883 1.208436514 0.98384806 0.397613325 0.116250992 53.07560269 32314.99104 0.034071791 0.044075733 9.27E-07 6.033001986 -0.224588454 STS(ph)TPNVHMVSTTLPVDSR ddPTM_A459_MK2206_30min_R2 6 STSTPNVHMVSTTLPVDSR 19 0 H7C155;P04049;P04049-2 H7C155 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 S(0.129)T(0.129)S(0.561)T(0.18)PNVHMVSTTLPVDSR;S(0.051)T(0.051)S(0.711)T(0.188)PNVHMVSTTLPVDSR;S(0.359)T(0.1)S(0.446)T(0.096)PNVHMVSTTLPVDSR;S(0.12)T(0.12)S(0.579)T(0.181)PNVHMVSTTLPVDSR;S(0.139)T(0.139)S(0.556)T(0.166)PNVHMVSTTLPVDSR;S(0.13)T(0.13)S(0.55)T(0.191)PNVHMVSTTLPVDSR 120.44 0.00028844 168563000 90735.3 124099 101519.5 148447 140706 149334 163616 118780.2 130341 135856 TRUE FALSE 97682.06433 117936.4241 104904.1095 136318.4052 135181.1754 155017.01 142133.0227 134305.18 141677.8246 131423.0298 0.743264437 0.897380195 0.798217098 1.037248992 1.028595792 1.179526984 1.081492512 1.021930328 1.078028902 1 17.00385858 -5.81203169 4.912958978 1.068877356 0.820515058 0.791817504 0.058253017 0.084667101 4.344627594 0.016575132 0.025803822 1.54E-06 5.81203169 -0.248362298 STS(ph)TPTSPGPR ddPTM_A459_MK2206_30min_R1 1 STSTPTSPGPR 11 0 H3BUF6;H3BRB0;A0A0C4DGL7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 S(0.011)T(0.011)S(0.801)T(0.06)PT(0.117)SPGPR 163.9 0.00064426 28317000 6007.4 4488.7 6402.7 4590.5 6157.7 3775.5 5368.5 4076.7 3930.2 3242.1 TRUE FALSE 5496.439084 4196.484814 5968.102563 4944.061105 5912.42577 3989.265547 5010.37716 4041.057842 4338.758354 3643.755825 1.508454284 1.151692105 1.6378986 1.356858512 1.622618544 1.094822414 1.375058429 1.1090364 1.190737954 1 11.83121057 -7.695553197 0.743354102 1.033443003 1.434548761 0.421642898 0.165371815 0.646391379 0.680215582 0.144413873 0.070467248 2.02E-08 7.695553197 0.401105759 STS(ph)TPTSPGPR ddPTM_A459_MK2206_30min_R2 4 STSTPTSPGPR 11 0 H3BUF6;H3BRB0;A0A0C4DGL7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 S(0.005)T(0.105)S(0.714)T(0.047)PT(0.098)S(0.03)PGPR;S(0.002)T(0.044)S(0.715)T(0.044)PT(0.098)S(0.098)PGPR;STS(0.944)T(0.013)PT(0.043)SPGPR;S(0.009)T(0.034)S(0.756)T(0.199)PT(0.001)SPGPR 149.94 0.0023413 79587000 252905 283841 265687 293718 299767 287284 270913 216522 211580 204894 TRUE FALSE 272267.6013 269745.8687 274544.872 269720.2998 287996.6414 298216.7939 235341.7977 244822.1688 229982.846 198208.3256 1.373643617 1.36092098 1.385132896 1.36079198 1.452999719 1.5045624 1.187345673 1.235176011 1.160308707 1 17.59665804 -8.056058197 0.961244656 1.022315337 1.399636643 0.79037342 0.066616132 0.246543551 0.436415371 0.065324409 0.024156694 8.79E-09 8.056058197 0.377321306 STS(ph)VPENPK ddPTM_A459_MK2206_30min_R1 2 STSVPENPK 9 0 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;D6RDA9;Q3MSN4;P04150-12;P04150-13;P04150-11 P04150-3 NR3C1 Glucocorticoid receptor 1 S(0.002)T(0.002)S(0.997)VPENPK;S(0.003)T(0.026)S(0.971)VPENPK 133.91 0.0030091 20347300 18601.4 16837.1 19560.6 16368.1 16656.6 12108.2 13167.3 15394.1 13309.1 12780.6 TRUE FALSE 17019.25325 15741.00173 18232.88097 17628.7739 15993.13235 12793.75582 12288.93344 15259.51101 14692.62857 14363.95722 1.184858253 1.095868046 1.269349435 1.227292287 1.113421052 0.890684623 0.855539546 1.062347289 1.022881672 1 13.81016564 -6.582253237 4.918862418 0.964287629 1.190701877 0.707321784 0.069598545 0.121149235 5.981425774 0.025296272 0.02551337 2.62E-07 6.582253237 0.226414247 STS(ph)VPENPK ddPTM_A459_MK2206_30min_R2 4 STSVPENPK 9 0 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;D6RDA9;Q3MSN4;P04150-12;P04150-13;P04150-11 P04150-3 NR3C1 Glucocorticoid receptor 1 STS(1)VPENPK;S(0.037)T(0.025)S(0.938)VPENPK;S(0.024)T(0.002)S(0.974)VPENPK;S(0.004)T(0.001)S(0.995)VPENPK 143.4 0.0020367 39504100 334580 312357 367045 381273 386611 271038 387778 261859 301284 486110 TRUE FALSE 360195.702 296845.8056 379282.0971 350121.7763 371430.7096 281352.541 336862.2828 296084.8704 327489.1377 470248.2705 0.765969222 0.63125337 0.806557134 0.744546654 0.789860873 0.598306381 0.71634986 0.629635214 0.696417527 1 18.84306311 -11.49718297 4.132072789 1.2291014 0.707447006 0.627069528 0.067371231 0.044363101 0.000275877 0.020352157 0.015832384 3.18E-12 11.49718297 -0.521654394 STSAPQMS(ph)PGSSDNQSS(ph)SPQPAQQK ddPTM_A459_MK2206_30min_R2 2 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 STSAPQMS(0.563)PGS(0.406)S(0.031)DNQS(0.004)S(0.766)S(0.23)PQPAQQK;STS(0.001)APQMS(0.898)PGS(0.047)S(0.053)DNQS(0.013)S(0.529)S(0.458)PQPAQQK 132.48 2.16E-07 11501000 104461.2 125143.4 106639.3 122061.4 124589.1 110775.9 132801.9 99148.3 99660.6 130018.7 TRUE FALSE 112458.8298 118928.9607 110194.601 112088.5932 119697.1059 114991.5545 115364.851 112107.3232 108328.8988 125776.2005 0.894118517 0.945560132 0.876116472 0.891174902 0.95166737 0.914255273 0.917223215 0.891323818 0.861282965 1 16.94049943 -10.70426284 3.809767105 1.000070838 0.906337917 0.526536584 0.027059664 6010008.239 3383508.685 3302.323621 0.006671756 1.98E-11 10.70426284 -0.093732921 STSAPQMS(ph)PGSSDNQSSS(ph)PQPAQQK ddPTM_A459_MK2206_30min_R2 1 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 STSAPQMS(0.968)PGS(0.023)S(0.009)DNQSS(0.271)S(0.729)PQPAQQK 151.64 1.60E-09 12871000 63084 68448 61550 73984 91029 72279 82482 62190 69691 70364 TRUE FALSE 67913.75954 65048.97185 63602.04628 67939.27054 87454.74408 75029.62799 71652.01432 70318.44653 75752.59721 68068.02844 0.997733607 0.955646481 0.93438943 0.998108394 1.284813826 1.102274147 1.052653 1.033061309 1.112895422 1 16.0546897 -6.018585321 24.93652929 1.101272903 0.962621044 0.423466675 0.072921077 696.6507564 934719.5019 0.022007321 0.028942459 9.58E-07 6.018585321 -0.138651859 STSAPQMS(ph)PGSSDNQSSSPQPAQQK ddPTM_A459_MK2206_30min_R1 3 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 STSAPQMS(0.976)PGS(0.019)S(0.005)DNQSSSPQPAQQK;STSAPQMS(0.983)PGS(0.016)S(0.002)DNQSSSPQPAQQK;S(0.001)T(0.001)S(0.004)APQMS(0.427)PGS(0.427)S(0.125)DNQS(0.011)S(0.004)S(0.001)PQPAQQK 154.45 1.50E-10 33528900 5652.8 4772.9 4303.7 4174.2 5722 5090 5362.3 4928.4 3616.3 3570.8 TRUE FALSE 5171.999676 4462.183342 4011.576835 4495.697607 5494.080623 5378.191401 5004.590751 4885.311518 3992.227326 4013.177662 1.288754227 1.111882832 0.999601107 1.120233886 1.369010068 1.340132896 1.247039422 1.21731753 0.994779614 1 11.97052931 -8.262394783 24.50267992 0.997389778 1.208993873 0.396410777 0.105758657 76.5753742 1963683.772 0.09692281 0.030537156 5.47E-09 8.262394783 0.211604095 STSAPQMSPGS(ph)SDNQSSSPQPAQQK ddPTM_A459_MK2206_30min_R1 2 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 STSAPQMS(0.088)PGS(0.451)S(0.451)DNQS(0.006)S(0.002)S(0.001)PQPAQQK;STSAPQMS(0.038)PGS(0.481)S(0.481)DNQSSSPQPAQQK 103.58 2.06E-06 7486200 3757.3 3885.4 3948.7 2863.2 3669.4 3187 3866 3373.7 3469.4 3041.9 TRUE FALSE 3437.721905 3632.459754 3680.673246 3083.72416 3523.240028 3367.445186 3608.106194 3344.204097 3830.056545 3418.753537 1.005548328 1.06250998 1.076612633 0.902002477 1.030562744 0.984992088 1.05538646 0.97819397 1.120307885 1 11.73925471 -7.273127459 24.80914298 1.036654908 1.011744208 0.055153311 0.056609612 2799.042586 5941241.574 0.023492319 0.015966847 5.33E-08 7.273127459 -0.0249107 STSAPQMSPGS(ph)SDNQSSSPQPAQQK ddPTM_A459_MK2206_30min_R2 1 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 STSAPQMS(0.11)PGS(0.662)S(0.227)DNQSSSPQPAQQK 122.87 1.44E-07 11871000 51127 64650 62204 69935 65390 55887 61308 48858 53760 57800 TRUE FALSE 55041.32243 61439.57501 64277.85031 64221.08679 62822.46004 58013.81895 53258.18596 55243.90835 58435.94762 55913.99073 0.984392666 1.098822928 1.149584379 1.148569185 1.123555289 1.037554612 0.952501963 0.988015837 1.045104219 1 15.7709217 -6.935480418 4.396543569 0.995077699 1.105673536 0.510420054 0.048314319 0.177035585 6.840811421 0.018758587 0.01624285 1.16E-07 6.935480418 0.110595836 STSAPQMSPGSS(ph)DNQSSSPQPAQQK ddPTM_A459_MK2206_30min_R1 1 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 S(0.003)T(0.003)S(0.009)APQMS(0.216)PGS(0.299)S(0.417)DNQS(0.018)S(0.018)S(0.018)PQPAQQK 63.883 0.0049987 17536000 3947.5 4071.4 4348.1 3595.6 4139.2 4078.7 3705.9 3680.5 3853.2 3373.6 TRUE FALSE 3611.744396 3806.35112 4052.963087 3872.533735 3974.326899 4309.632469 3458.686173 3648.321777 4253.753929 3791.547037 0.952578027 1.003904497 1.068947067 1.021359803 1.048207199 1.136642227 0.912209749 0.962225113 1.121904565 1 11.88857091 -4.874878029 3.56731932 1.032230891 0.950452882 0.130691809 0.064100786 0.551717179 11.88528115 0.016523679 0.103191326 1.33E-05 4.874878029 -0.08177801 STSAPQMSPGSSDNQSS(ph)SPQPAQQK ddPTM_A459_MK2206_30min_R2 3 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 STSAPQMSPGSSDNQS(0.001)S(0.5)S(0.5)PQPAQQK;STSAPQMSPGSSDNQS(0.341)S(0.571)S(0.088)PQPAQQK;STSAPQMSPGS(0.001)SDNQS(0.245)S(0.39)S(0.364)PQPAQQK 139.95 1.60E-08 83353800 163478.9 185900 177768 185567 197009 181131 194346 154878 146811 179889 TRUE FALSE 175994.9703 176668.4763 183694.6964 170405.5825 189273.4368 188024.0671 168828.1367 175121.0864 159580.3554 174019.2367 1.011353536 1.015223832 1.055599944 0.979234168 1.087658126 1.080478634 0.97016939 1.00633177 0.917027097 1 17.40888727 -7.287249707 24.15208587 0.973909693 1.037561855 0.414781983 0.037744347 533.6189378 499332.5705 0.015933035 0.010747226 5.16E-08 7.287249707 0.063652162 STSAPQMSPGSSDNQSSS(ph)PQPAQQK ddPTM_A459_MK2206_30min_R2 1 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 STSAPQMSPGSSDNQS(0.083)S(0.349)S(0.568)PQPAQQK 126.93 2.48E-08 0 11470 16529 16447 15679 15556 14244 15988 11664 12962 12677 TRUE FALSE 12348.15202 15708.1939 16995.33477 14397.97555 14945.19328 14786.0654 13888.75639 13188.52485 14089.41133 12263.35053 1.006915034 1.280905562 1.385863898 1.1740654 1.218687604 1.205711715 1.132541744 1.075442214 1.148903907 1 13.58206558 -7.90432087 0.673353728 1.020740167 1.230697834 0.312379289 0.093941828 0.819215378 0.763615321 0.09097864 0.043942462 1.25E-08 7.90432087 0.209957666 STSFRGGMGS(ph)GGLATGIAGGLAGMGGIQNEK ddPTM_A459_MK2206_30min_R2 1 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.117)T(0.087)S(0.238)FRGGMGS(0.525)GGLAT(0.032)GIAGGLAGMGGIQNEK 66.432 0.0006402 74047000 54170 178050 121290 160160 202750 192520 194180 142120 235100 97988 TRUE FALSE 58317.29685 169208.2959 125333.7481 147074.4157 194789.0163 199846.4835 168683.9327 160695.572 255548.573 94790.65958 0.615221976 1.785073515 1.322216225 1.551570759 2.054938927 2.108292994 1.779541713 1.695268001 2.695925676 1 16.53245729 -4.574263827 0.797638948 1.900714068 1.08E-14 0.343192487 0.452269543 3.971683465 1.548832439 0.163747495 7.236390705 2.67E-05 4.574263827 -1.900714068 STSFRGGMGS(ph)GGLATGIAGGLAGMGGIQNEKETMQSLNDR ddPTM_A459_MK2206_30min_R2 1 STSFRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR 40 2 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.01)T(0.01)S(0.081)FRGGMGS(0.873)GGLAT(0.026)GIAGGLAGMGGIQNEKETMQSLNDR 73.773 1.11E-08 9611600 615.24 7660.9 4144.9 6129.4 17896 11993 9216.8 4198 23861 4420.7 TRUE FALSE 662.3432474 7280.470846 4283.088897 5628.608413 17193.31312 12449.40202 8006.623089 4746.693014 25936.38665 4276.452921 0.154881454 1.702455512 1.001551748 1.316186222 4.020461218 2.911151426 1.872257976 1.109960311 6.064929774 1 12.06219894 -6.098553163 7.554842263 2.789274997 1.04899043 0.27484014 1.42669151 0.391081173 26.45040323 0.409827554 0.531273827 7.97E-07 6.098553163 -1.740284567 STSFRGGMGSGGLAT(ph)GIAGGLAGMGGIQNEK ddPTM_A459_MK2206_30min_R2 1 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 S(0.044)T(0.049)S(0.138)FRGGMGS(0.091)GGLAT(0.678)GIAGGLAGMGGIQNEK 72.878 0.00013401 66112000 12156 43087 24265 32240 40965 41189 43377 25138 53250 21067 TRUE FALSE 13086.67271 40947.36223 25073.98299 29605.88887 39356.50827 42756.47626 37681.54779 28423.62291 57881.58875 20379.58552 0.642146166 2.0092343 1.230348035 1.452722817 1.931173146 2.098005194 1.848984994 1.394710549 2.840174973 1 14.31483709 -6.195188543 4.685340867 1.88429403 1.364536668 0.178725802 0.542468821 0.391362726 17.0496203 0.15385597 0.199046322 6.38E-07 6.195188543 -0.519757362 STSGPRPGCQPS(ph)SPCVPK ddPTM_A459_MK2206_30min_R1 1 STSGPRPGCQPSSPCVPK 18 1 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 STSGPRPGCQPS(0.5)S(0.5)PCVPK 53.033 0.043046 5374600 2447.3 2526.6 2251.7 2317.2 2156.8 1714.9 1968.7 2209.1 1729.5 1687 TRUE FALSE 2239.144284 2362.117881 2098.860878 2495.671146 2070.890089 1811.996156 1837.371615 2189.786072 1909.287714 1895.998296 1.180984333 1.245843884 1.106995129 1.316283433 1.09224259 0.955695034 0.969078727 1.154951498 1.007009193 1 10.88874195 -6.498334458 9.22183942 1.023936183 1.207132558 0.628967637 0.070580447 0.241014667 86.39406959 0.02203704 0.024297359 3.17E-07 6.498334458 0.183196375 STSGPRPGCQPS(ph)SPCVPK ddPTM_A459_MK2206_30min_R2 1 STSGPRPGCQPSSPCVPK 18 1 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 STSGPRPGCQPS(0.571)S(0.428)PCVPK 52.72 0.044071 6835500 29913 37667 33403 39377 37381 30422 32048 27350 27150 33823 TRUE FALSE 32203.16228 35796.51155 34516.63935 36159.77314 35913.23412 31579.73053 27840.0591 30924.73891 29511.45792 32719.35828 0.984223529 1.094046871 1.054930205 1.105149216 1.097614257 0.965169618 0.85087424 0.945151144 0.901957113 1 14.99785683 -6.902612887 4.662869996 0.918385729 1.069530205 0.671586806 0.04752307 0.116150713 4.353815573 0.01655539 0.014518866 1.25E-07 6.902612887 0.151144475 STSGPRPGCQPSS(ph)PCVPK ddPTM_A459_MK2206_30min_R1 1 STSGPRPGCQPSSPCVPK 18 1 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 STSGPRPGCQPS(0.286)S(0.713)PCVPK 56.428 0.035155 6030000 2686.8 2621.9 2669.4 2338.7 2530.9 2286.1 2341 2354.2 2302.8 1908.1 TRUE FALSE 2458.273551 2451.213833 2488.208565 2518.827079 2430.088894 2415.537006 2184.836161 2333.617478 2542.184301 2144.489833 1.146320916 1.14302889 1.160279954 1.174557715 1.13317809 1.12639238 1.018813952 1.088192372 1.185449453 1 11.06641876 -7.032846918 7.758796491 1.079232556 1.150617658 0.377961491 0.047265132 0.301789581 62.09476155 0.017826102 0.014102247 9.27E-08 7.032846918 0.071385102 STSGPRPGCQPSS(ph)PCVPK ddPTM_A459_MK2206_30min_R2 3 STSGPRPGCQPSSPCVPK 18 1 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 STSGPRPGCQPS(0.278)S(0.722)PCVPK;STSGPRPGCQPS(0.099)S(0.901)PCVPK;S(0.001)T(0.001)S(0.001)GPRPGCQPS(0.447)S(0.551)PCVPK 98.376 0.0018078 37053700 161266 181930 158700 162176 172201 134344 182648 129648 145937 181109 TRUE FALSE 173612.649 172895.6208 163990.9788 148925.702 165439.5235 139456.5551 158666.0982 146593.4387 158630.3365 175199.4282 0.990943011 0.986850371 0.936024624 0.85003532 0.9442926 0.795987501 0.90563137 0.836723272 0.90542725 1 17.41863854 -5.480848726 3.248489713 0.883212412 0.9882058 0.332694223 0.054275778 0.239819622 5.058803633 0.013872029 0.030496335 3.30E-06 5.480848726 0.104993388 STSLSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 STSLSSPR 8 0 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 STS(0.002)LS(0.097)S(0.901)PR 85.862 0.03468 14827000 155760 204230 155180 208480 210840 232020 208310 164190 162320 198350 TRUE FALSE 167685.1054 194088.2352 160353.6237 191446.5171 202561.3622 240849.6837 180958.6468 185650.1967 176438.3002 191877.8557 0.873915881 1.011519721 0.835706774 0.997752014 1.055678684 1.255223969 0.943092917 0.967543628 0.919534459 1 17.5498287 -4.758284374 24.23040254 1.000411084 0.873915625 0.115957826 0.103028608 148.4497063 1139798.043 0.027498718 0.189410141 1.74E-05 4.758284374 -0.126495459 STSPVT(ph)DPSIPIR ddPTM_A459_MK2206_30min_R2 1 STSPVTDPSIPIR 13 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.014)T(0.014)S(0.024)PVT(0.948)DPSIPIR 195.72 0.00047331 23791000 38712 50950 43225 53459 48012 47821 45075 38596 37760 44358 TRUE FALSE 41675.82048 48419.89709 44666.09993 49091.22869 46126.80764 49640.86166 39156.59836 43640.62972 41044.29655 42910.60209 0.971224323 1.128390065 1.040910585 1.144034954 1.074951303 1.156843746 0.912515706 1.017012757 0.956507123 1 15.38904652 -7.26397002 24.99992091 0.972926627 1.088061447 0.494716788 0.056685158 188.2332383 1859525.15 0.021702462 0.015375826 5.45E-08 7.26397002 0.11513482 STSQGS(ph)INSPVYSR ddPTM_A459_MK2206_30min_R1 2 STSQGSINSPVYSR 14 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 STSQGS(0.548)INS(0.451)PVYSR;STS(0.005)QGS(0.971)INS(0.024)PVYSR 153.41 0.00036383 11670000 3362.47 3092.4 2784.03 2575.08 3586.59 2861.06 3304.2 3244.7 3085.53 2847.91 TRUE FALSE 3076.474269 2891.084198 2595.0578 2773.413108 3443.728526 3023.050745 3083.782847 3216.33193 3406.281885 3200.730591 0.961178763 0.903257589 0.810770456 0.866493767 1.075919521 0.944487722 0.963462172 1.004874305 1.064220117 1 11.64418553 -6.243503427 24.71040283 1.003585787 0.8813664 0.582029812 0.051068504 549.455738 756986.1109 0.015811395 0.020362866 5.71E-07 6.243503427 -0.122219387 STSQGS(ph)INSPVYSR ddPTM_A459_MK2206_30min_R2 2 STSQGSINSPVYSR 14 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 STS(0.001)QGS(0.982)INS(0.016)PVYSR;S(0.004)T(0.015)S(0.453)QGS(0.522)INS(0.006)PVYSR 118.52 0.002347 11263000 24374.6 26372.4 23476.8 31044.2 25686.4 26740.4 25208.6 25400.8 21375.7 22186.9 TRUE FALSE 26240.73812 25062.78497 24259.50479 28507.78955 24677.82287 27758.02466 21898.68054 28720.77177 23234.91975 21462.94327 1.222606694 1.167723581 1.130297205 1.328233001 1.149787453 1.293300006 1.020301841 1.338156254 1.082559808 1 14.38956031 -8.516028785 23.37176591 0.999999985 1.201924302 0.354415672 0.092355516 181.4209674 618997.9182 0.081622438 0.021074823 3.05E-09 8.516028785 0.201924317 STSQGSINS(ph)PVYSR ddPTM_A459_MK2206_30min_R2 2 STSQGSINSPVYSR 14 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 STSQGS(0.07)INS(0.929)PVYSR;STSQGS(0.086)INS(0.914)PVYSR 185.63 7.99E-05 14242900 37861 41975 39220 48298 44101 46880 40963 39630 45421 46934 TRUE FALSE 40759.66727 39890.58254 40527.57523 44351.8989 42369.37315 48664.05125 35584.50889 44809.77707 49371.63648 45402.54742 0.897739655 0.878597894 0.892627782 0.976859261 0.933193743 1.071835261 0.783755778 0.986944117 1.087419964 1 15.47048563 -3.515417571 0.192162351 1.0236913 0.657419498 0.208161793 0.078259961 44.55267602 1.019339089 0.175357989 4.194854245 0.000305199 3.515417571 -0.366271802 STSQS(ph)IVSLLTGTAGEDEK ddPTM_A459_MK2206_30min_R1 1 STSQSIVSLLTGTAGEDEK 19 0 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 S(0.04)T(0.04)S(0.294)QS(0.627)IVSLLTGTAGEDEK 165.66 7.13E-09 15028000 1118.9 1724.6 1794.1 1596.4 2233.2 2056 2351.9 2728.8 2951.4 2358.7 TRUE FALSE 1023.731679 1612.328227 1672.321491 1719.355005 2144.246915 2172.408943 2195.009042 2704.942389 3258.208592 2650.913563 0.386180709 0.608216069 0.630847235 0.648589614 0.808870928 0.819494446 0.828019847 1.02038121 1.229088959 1 11.37227391 -6.522210588 0.469130828 1.115810845 0.421000075 0.847100286 0.090313242 0.486550263 0.217113691 0.084725572 0.150791852 3.00E-07 6.522210588 -0.69481077 down STSS(ph)HGTDEMESSSYR ddPTM_A459_MK2206_30min_R2 1 STSSHGTDEMESSSYR 16 0 A0A0D9SGE8;Q5JRC6;Q8IWS0-2;Q8IWS0-3;Q8IWS0-4;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 1 STS(0.088)S(0.886)HGT(0.026)DEMESSSYR 210.02 1.94E-29 0 8600.1 11904 8112.3 12482 10715 13774 14364 10669 10821 9501.8 TRUE FALSE 9258.530268 11312.86467 8382.760033 11462.18067 10294.27526 14298.17922 12477.98955 12063.47493 11762.19102 9191.757044 1.007264468 1.230761933 0.911986685 1.247006488 1.119946405 1.555543641 1.357519513 1.312423172 1.279645552 1 13.16612495 -5.926642971 7.27695365 1.294348927 1.067835429 0.280768647 0.156336005 0.28085181 23.37229316 0.043465965 0.064741958 1.18E-06 5.926642971 -0.226513498 STSS(ph)SSDTMSTFKPMVAPR ddPTM_A459_MK2206_30min_R1 2 STSSSSDTMSTFKPMVAPR 19 1 Q7Z6B7;Q7Z6B7-2;G5EA48 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 S(0.074)T(0.074)S(0.324)S(0.501)S(0.024)S(0.002)DTMSTFKPMVAPR;S(0.1)T(0.1)S(0.1)S(0.576)S(0.059)S(0.059)DT(0.004)MSTFKPMVAPR 130.64 0.00015592 30548000 3311.3 2870.8 3071.7 2882.86 3930.9 3140.9 3696 3393.2 2660.56 2499.29 TRUE FALSE 3029.656547 2683.910398 2863.201562 3104.898377 3774.323929 3318.735044 3449.446584 3363.53361 2937.134733 2808.920914 1.078583783 0.955495181 1.019324378 1.105370522 1.343691775 1.181498214 1.228032647 1.197446889 1.045645222 1 11.45580029 -5.925087125 4.263271003 1.183179841 1.013273988 0.319189083 0.094201269 0.2165753 7.601550318 0.026627307 0.040328771 1.19E-06 5.925087125 -0.169905853 STSSFNFTITASQVVDSAVYFCALSE ddPTM_A459_MK2206_30min_R2 1 STSSFNFTITASQVVDSAVYFCALSE 26 0 A0A0A6YYK7 A0A0A6YYK7 TRAV19 0 50.531 0.044188 6436400 4189.9 9174.4 6934.4 8774.9 8745 9076.6 7436.3 5684.2 10382 6123.2 FALSE TRUE 4510.681965 8718.812637 7165.589435 8057.9626 8401.62736 9422.016373 6459.904877 6427.144457 11285.00759 5923.400485 0.76150211 1.471926921 1.209708756 1.360360931 1.418379085 1.590643144 1.090573716 1.085043038 1.905156949 1 12.53220992 -4.753996463 24.92494259 1.348440202 0.761501029 0.317504456 0.257955153 307.2798314 1028933.691 0.061140732 0.622678955 1.76E-05 4.753996463 -0.586939173 STSSHGT(ph)DEMESSSYR ddPTM_A459_MK2206_30min_R1 1 STSSHGTDEMESSSYR 16 0 A0A0D9SGE8;Q5JRC6;Q8IWS0-2;Q8IWS0-3;Q8IWS0-4;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 1 STS(0.036)S(0.012)HGT(0.952)DEMESSSYR 230.23 6.75E-15 3950900 1144.7 837.48 1038.8 641.13 1396.1 1129.7 1374.1 1024.4 603.94 713.78 TRUE FALSE 1047.337254 782.9598998 968.2891503 690.5099437 1340.490381 1193.662638 1282.436296 1015.443779 666.7217242 802.2084552 1.305567458 0.976005544 1.20702935 0.860761239 1.671000065 1.487970652 1.598632236 1.265810367 0.831107825 1 9.647833362 -4.484821289 18.68582794 1.237286245 1.656613161 0.002213397 0.285407557 44963255.44 557623475.3 0.074696935 661989482.8 3.27E-05 4.484821289 0.419326916 STSST(ph)SSGSNSNALVPVSWK ddPTM_A459_MK2206_30min_R1 1 STSSTSSGSNSNALVPVSWK 20 0 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915 H0Y9X0 FRYL Protein furry homolog-like 1 STS(0.01)S(0.089)T(0.85)S(0.043)S(0.008)GS(0.001)NSNALVPVSWK 224.36 1.04E-19 5379800 3346.9 2754.7 3234.3 2892.2 3246.4 2935.4 3032.7 3375.4 2671.5 2914.7 TRUE FALSE 3062.22858 2575.368529 3014.764727 3114.957745 3117.089014 3101.599811 2830.394116 3345.889234 2949.211985 3275.795041 0.934804694 0.786181216 0.920315432 0.950901295 0.951551906 0.946823526 0.864032725 1.021397612 0.900304185 1 11.67762938 -1.522878745 0.144043696 1.001673574 0.518821141 0.217963142 0.056219951 102.862066 0.984245249 0.219470239 10.28194235 0.03 1.522878745 -0.482852433 STSSTSSGS(ph)NSNALVPVSWK ddPTM_A459_MK2206_30min_R2 1 STSSTSSGSNSNALVPVSWK 20 0 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915 H0Y9X0 FRYL Protein furry homolog-like 1 S(0.055)T(0.055)S(0.037)S(0.018)T(0.018)S(0.018)S(0.003)GS(0.765)NS(0.032)NALVPVSWK 160.64 8.69E-07 4937700 44506 54249 57192 58558 61023 55403 73458 49767 56117 50912 TRUE FALSE 47913.41358 51555.07355 59098.75274 53773.62408 58626.9304 57511.39999 63812.87636 56271.71778 60997.95522 49250.74561 0.972846461 1.046787676 1.199956508 1.091833706 1.190376505 1.167726484 1.295673305 1.142555652 1.238518412 1 15.58785795 -5.071029312 2.815788634 1.174309192 0.974577348 0.408449439 0.076568571 0.254027598 3.696760117 0.019190636 0.084541106 8.49E-06 5.071029312 -0.199731844 STST(ph)PTSPGPR ddPTM_A459_MK2206_30min_R2 1 STSTPTSPGPR 11 0 H3BUF6;H3BRB0;A0A0C4DGL7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 ST(0.001)S(0.24)T(0.619)PT(0.14)SPGPR 121.36 0.0063024 0 38181 41330 38152 46821 35080 44465 37362 38211 29756 23982 TRUE FALSE 41104.16672 39277.6123 39423.96864 42995.57453 33702.58294 46157.14673 32456.32452 43205.3089 32344.12309 23199.4693 1.771771853 1.693039258 1.699347865 1.853299917 1.452730771 1.989577698 1.399011507 1.862340398 1.394175128 1 14.50180418 -8.545811013 3.956071498 1.000596303 1.706953249 0.634556367 0.170545736 0.113934161 5.60268961 0.147913733 0.038781961 2.85E-09 8.545811013 0.706356946 STSTLEIQPSRAS(ph)PTSDIESVER ddPTM_A459_MK2206_30min_R1 2 STSTLEIQPSRASPTSDIESVER 23 1 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 STSTLEIQPSRAS(0.705)PT(0.223)S(0.071)DIESVER;STSTLEIQPS(0.027)RAS(0.733)PT(0.19)S(0.05)DIESVER 154.72 4.97E-09 33830000 3667.5 3954 4467.2 3524.1 4802.7 3913.8 4708.1 4659.5 3628.6 3733 TRUE FALSE 3355.559866 3696.593881 4163.97891 3795.526793 4611.398289 4135.395974 4394.031239 4618.762483 4005.805955 4195.472223 0.799805049 0.881091254 0.9924935 0.90467213 1.09913689 0.985680694 1.047326977 1.100892161 0.954792629 1 12.03461749 -4.550326041 0.690004524 1.033587315 0.577710848 0.63393442 0.054913689 2.444338391 0.706515039 0.022540523 0.937540224 2.82E-05 4.550326041 -0.455876468 STSTLEIQPSRAS(ph)PTSDIESVER ddPTM_A459_MK2206_30min_R2 3 STSTLEIQPSRASPTSDIESVER 23 1 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 STSTLEIQPS(0.094)RAS(0.889)PT(0.012)S(0.004)DIESVER;STSTLEIQPS(0.002)RAS(0.803)PT(0.153)S(0.042)DIESVER;STSTLEIQPS(0.002)RAS(0.661)PT(0.168)S(0.168)DIES(0.001)VER 98.684 3.19E-05 32543400 40298.1 69531.9 71052.2 75893.3 68693.2 73883.6 65917 50764.9 63430.4 68775.8 TRUE FALSE 43383.35352 66079.04695 73421.04489 69692.57462 65995.95981 76695.29217 57262.01872 57400.04673 68947.46154 66531.65128 0.652070897 0.993197158 1.103550618 1.047510069 0.991948322 1.152763996 0.860673343 0.862747965 1.036310691 1 16.02175322 -4.762463236 6.430163364 1.005842076 0.641916475 0.598185943 0.086936855 0.089354448 16.96802209 0.023044155 0.142911537 1.73E-05 4.762463236 -0.363925601 STSTPNVHMVS(ph)TTLPVDSR ddPTM_A459_MK2206_30min_R1 1 STSTPNVHMVSTTLPVDSR 19 0 H7C155;P04049;P04049-2 H7C155 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 STS(0.001)T(0.079)PNVHMVS(0.875)T(0.035)T(0.011)LPVDSR 115.37 0.0018025 7501100 1590.1 1319.9 1574.9 1298.6 1545.7 1224 1563.8 1649.7 1290.1 1337.6 TRUE FALSE 1454.853645 1233.97427 1468.000176 1398.618397 1484.131496 1293.301822 1459.481755 1635.276847 1424.210512 1503.311986 0.967765612 0.820837113 0.976510657 0.930358043 0.987241178 0.860301677 0.970844222 1.08778275 0.947381864 1 10.55392873 -7.522385466 24.99981407 1.016412093 0.923963986 0.31834348 0.057914561 20.19100271 1023474.148 0.025575178 0.014984595 3.00E-08 7.522385466 -0.092448107 STSTPTS(ph)PGPR ddPTM_A459_MK2206_30min_R1 7 STSTPTSPGPR 11 0 H3BUF6;H3BRB0;A0A0C4DGL7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 STSTPTS(1)PGPR;STSTPT(0.002)S(0.998)PGPR;STSTPTS(1)PGPR;STST(0.001)PT(0.002)S(0.997)PGPR;STST(0.002)PT(0.114)S(0.884)PGPR;STS(0.001)T(0.005)PT(0.115)S(0.878)PGPR;ST(0.001)ST(0.008)PT(0.168)S(0.822)PGPR 174.57 0.00012433 509296300 46574.7 55046.4 47758 42729.2 48587.3 49224.4 47381.6 45834.6 37241.7 38466.5 TRUE FALSE 42613.27719 51462.86935 44516.32002 46020.21039 46651.96496 52011.44299 44220.85992 45433.87292 41113.10799 43232.02043 0.985687848 1.190387792 1.029707138 1.064493631 1.079106748 1.203076851 1.022872849 1.050931057 0.95098743 1 15.39981264 -7.867006895 2.023712059 0.981369746 1.090805324 0.287661432 0.066021118 0.416403407 3.255158149 0.0487024 0.018258321 1.36E-08 7.867006895 0.109435578 STSTPTS(ph)PGPR ddPTM_A459_MK2206_30min_R2 3 STSTPTSPGPR 11 0 H3BUF6;H3BRB0;A0A0C4DGL7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 S(0.001)TS(0.016)T(0.036)PT(0.116)S(0.831)PGPR;STST(0.008)PT(0.003)S(0.989)PGPR;STSTPT(0.001)S(0.999)PGPR 144.7 0.00073555 132535300 263113 369798 305517 352836 326076 348535 365329 277238 347561 313627 TRUE FALSE 283257.1336 351434.3691 315702.7843 324008.1701 313272.6178 361798.7437 317360.8635 313473.9585 377791.2275 303393.3767 0.933629919 1.158345554 1.040572434 1.067947408 1.032562481 1.19250706 1.046037547 1.03322611 1.2452191 1 18.21083007 STSYGYS(ph)R ddPTM_A459_MK2206_30min_R1 2 STSYGYSR 8 0 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 STSYGYS(1)R;STSYGYS(1)R 105.17 0.01427 205844000 7708.4 8241.6 8226 5581.8 7096.5 6282.1 8185.5 6463.6 7417.2 7222.4 TRUE FALSE 7052.760102 7705.070342 7667.642039 6011.711203 6813.831378 6637.787073 7639.46023 6407.089427 8188.244483 8117.165438 0.868869823 0.94923165 0.944620643 0.74061706 0.839434829 0.817746925 0.941148765 0.789325963 1.008756634 1 12.9867603 -8.280812538 24.37221982 1.004378401 0.863526229 0.430123217 0.065804531 678.1571727 853138.2813 0.064900373 0.016866924 5.24E-09 8.280812538 -0.140852171 STSYGYS(ph)R ddPTM_A459_MK2206_30min_R2 1 STSYGYSR 8 0 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 STSYGYS(1)R 84.817 0.036143 335550000 36893 37512 36233 50116 35462 39657 44000 33718 30424 34264 TRUE FALSE 39717.55645 35649.20863 37440.99014 46021.36249 34069.5837 41166.17492 38222.74715 38125.05837 33070.22453 33145.96849 1.198262059 1.075521708 1.129579006 1.38844525 1.027865084 1.241966272 1.153164288 1.150217058 0.997714836 1 15.01654579 -8.227879398 3.68962944 0.993401963 1.172228177 0.359395737 0.092075016 0.246364148 6.842934096 0.075613435 0.023242897 5.92E-09 8.227879398 0.178826215 STT(ph)AHSWQR ddPTM_A459_MK2206_30min_R2 1 STTAHSWQR 9 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 S(0.002)T(0.053)T(0.942)AHS(0.002)WQR 97.163 0.028249 2593700 14847 26331 20211 32028 23652 25297 26002 22758 26987 17249 TRUE FALSE 15983.69774 25023.44083 20884.82465 29411.20995 22723.30364 26259.69506 22587.90617 25732.54874 29334.28048 16686.16654 0.957901127 1.499651868 1.251625087 1.762610356 1.361804917 1.573740439 1.353690562 1.542148622 1.757999982 1 14.02636493 -4.392701965 2.022654302 1.479516432 4.56E-11 0.3011766 0.221278901 3.911296831 6.075385997 0.054415824 15.87951912 4.05E-05 4.392701965 -1.479516431 STT(ph)PPPAEPVSLPQEPPK ddPTM_A459_MK2206_30min_R1 4 STTPPPAEPVSLPQEPPK 18 0 Q9UN86-2;Q9UN86 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.015)T(0.015)T(0.97)PPPAEPVSLPQEPPK;S(0.018)T(0.018)T(0.964)PPPAEPVSLPQEPPK;S(0.175)T(0.259)T(0.567)PPPAEPVSLPQEPPK;S(0.044)T(0.044)T(0.912)PPPAEPVSLPQEPPK 236.31 1.91E-24 92377000 25270 26490.4 25614 21783.9 21795.3 18358.2 22922.1 21261.7 22904.1 21685.7 TRUE FALSE 23120.6538 24765.87015 23875.39304 23461.69975 20927.14705 19397.62542 21393.00853 21075.8112 25285.06316 24372.28823 0.948645182 1.016148747 0.979612288 0.962638367 0.858645148 0.795888561 0.877759541 0.864744869 1.037451343 1 14.57295409 -6.110078953 4.936587023 0.892397754 0.982996586 0.194956288 0.068115917 0.313338884 11.60411537 0.020613729 0.027117191 7.76E-07 6.110078953 0.090598833 STT(ph)PPPAEPVSLPQEPPK ddPTM_A459_MK2206_30min_R2 3 STTPPPAEPVSLPQEPPK 18 0 Q9UN86-2;Q9UN86 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.145)T(0.145)T(0.71)PPPAEPVSLPQEPPK;S(0.03)T(0.03)T(0.939)PPPAEPVSLPQEPPK;S(0.079)T(0.112)T(0.809)PPPAEPVSLPQEPPK 209.23 3.27E-11 91825000 327643 356577 343605 358168 315474 282420 400479 291495 276915 368027 TRUE FALSE 352727.6 338869.9047 355060.6192 328904.5287 303086.9056 293167.691 347895.6262 329594.3974 301000.5662 356018.3091 0.99075691 0.951832802 0.997309998 0.923841612 0.851323929 0.823462399 0.977184648 0.925779346 0.845463726 1 18.44159191 -5.920340037 5.224753858 0.898775659 0.976388152 0.280356414 0.054020207 0.264073806 12.57754211 0.015516864 0.023321831 1.20E-06 5.920340037 0.077612494 STT(ph)PPPAEPVSLPQEPPKPR ddPTM_A459_MK2206_30min_R1 2 STTPPPAEPVSLPQEPPKPR 20 1 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.147)T(0.147)T(0.707)PPPAEPVSLPQEPPKPR;S(0.105)T(0.155)T(0.741)PPPAEPVSLPQEPPKPR 203.58 6.84E-16 1870700000 18222.9 21369.7 19095.7 17507.6 17166.9 16105.6 17479 17300.4 16790.2 14707.4 TRUE FALSE 16672.94666 19978.52865 17799.53709 18856.03839 16483.10602 17017.48515 16313.0078 17149.14443 18535.60137 16529.46375 1.008680434 1.208661633 1.076836936 1.140753183 0.997195449 1.029524334 0.986904842 1.037489461 1.121367375 1 14.0127523 -6.259716453 24.99473867 1.02856815 1.11359251 0.307526618 0.058618919 186.5945655 2706961.04 0.017008458 0.020851316 5.50E-07 6.259716453 0.08502436 STT(ph)PPPAEPVSLPQEPPKPR ddPTM_A459_MK2206_30min_R2 3 STTPPPAEPVSLPQEPPKPR 20 1 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.146)T(0.146)T(0.708)PPPAEPVSLPQEPPKPR;S(0.158)T(0.158)T(0.683)PPPAEPVSLPQEPPKPR;S(0.138)T(0.138)T(0.724)PPPAEPVSLPQEPPKPR 176.7 5.99E-13 2516810000 5630635 6264269 6609511 7522437 6694104 4910025 6887484 4942446 5599488 6484292 TRUE FALSE 6061720.745 5953194.511 6829868.798 6907829.834 6431259.842 5096879.442 5983149.077 5588440.662 6086521.345 6272710.083 0.966363926 0.949062595 1.088822647 1.101251252 1.025276118 0.812548225 0.953837974 0.890913272 0.970317656 1 22.58065745 -6.576553131 24.99293058 0.920301214 1.030057209 0.376614897 0.064491506 97.78694017 45532.71141 0.021909594 0.021909597 2.65E-07 6.576553131 0.109755995 STT(ph)PTSSPFR ddPTM_A459_MK2206_30min_R1 4 STTPTSSPFR 10 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.01)T(0.012)T(0.857)PT(0.034)S(0.084)S(0.003)PFR;S(0.073)T(0.073)T(0.818)PT(0.028)S(0.007)SPFR;S(0.337)T(0.059)T(0.571)PT(0.023)S(0.008)S(0.002)PFR;S(0.088)T(0.037)T(0.752)PT(0.034)S(0.069)S(0.02)PFR 118.03 0.013653 294075000 27981 27667.2 26813.6 23368.4 30089.9 28255 27608.9 25156.5 22950.5 19749.2 TRUE FALSE 25601.06902 25866.06025 24993.56754 25168.23822 28891.35557 29854.77368 25767.16066 24936.55937 25336.2866 22195.87999 1.153415365 1.165354122 1.126045354 1.133914863 1.301653981 1.345059249 1.160898359 1.123476942 1.141486015 1 14.43800429 -10.84150385 6.87084059 0.999996137 1.185597518 0.363529131 0.072783947 4.83E-06 4.80E-07 0.079106821 0.019185823 1.44E-11 10.84150385 0.185601381 STT(ph)PTSSPFR ddPTM_A459_MK2206_30min_R2 2 STTPTSSPFR 10 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.002)T(0.002)T(0.925)PT(0.053)S(0.014)S(0.004)PFR;S(0.024)T(0.008)T(0.934)PT(0.008)S(0.024)S(0.001)PFR 136.49 0.0043266 156853000 254460 287340 278810 313000 338570 348950 320530 284620 304940 346230 TRUE FALSE 273941.6532 273071.1134 288105.3862 287426.8988 325276.0406 362229.5368 278444.026 321820.8112 331463.13 334932.5435 0.817900973 0.815301824 0.860189288 0.858163545 0.971168813 1.081499973 0.831343599 0.960852618 0.989641456 1 18.35351104 -6.185074832 3.71642512 0.969143822 0.83361102 0.559957656 0.058678735 0.196340762 5.239568596 0.018557863 0.024203047 6.53E-07 6.185074832 -0.135532802 STT(ph)SVSEEDVSSR ddPTM_A459_MK2206_30min_R1 1 STTSVSEEDVSSR 13 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 S(0.14)T(0.011)T(0.545)S(0.297)VS(0.008)EEDVSSR 202.61 0.00017065 19760000 1921.6 2096.2 1808.9 1902.2 2114.3 2320.1 2200.4 2755.9 2484.8 2821.7 TRUE FALSE 1758.157829 1959.736999 1686.116908 2048.707774 2030.082954 2451.462057 2053.615331 2731.805457 2743.103852 3171.273499 0.554401199 0.617965306 0.531684482 0.646020526 0.640147548 0.77302133 0.64756803 0.86142222 0.864984951 1 11.63084659 -7.758118095 0.440172467 1.013371339 0.551107146 0.874848101 0.051537413 0.313371475 0.154778347 0.055020772 0.043186336 1.75E-08 7.758118095 -0.462264193 STTS(ph)VSEEDVSSR ddPTM_A459_MK2206_30min_R1 1 STTSVSEEDVSSR 13 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 STT(0.058)S(0.928)VS(0.013)EEDVSSR 258.65 1.33E-29 24380000 2387.6 2867.7 2331.2 2259.7 2632.8 3196.6 3486.6 3686.2 3701 3573.9 TRUE FALSE 2184.522082 2681.012209 2172.964639 2433.742486 2527.930001 3377.58873 3254.015276 3653.971942 4085.732194 4016.661714 0.543865089 0.667472742 0.540987714 0.605911739 0.629360942 0.840894497 0.810129283 0.90970368 1.017195991 1 11.97178125 -7.181108162 0.814638018 1.006511543 0.575369964 0.915744828 0.050204574 0.169101972 0.223614484 0.039314056 0.025223997 6.59E-08 7.181108162 -0.431141579 STTS(ph)VSEEDVSSR ddPTM_A459_MK2206_30min_R2 2 STTSVSEEDVSSR 13 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 STT(0.041)S(0.959)VSEEDVSSR;STT(0.022)S(0.975)VS(0.003)EEDVSSR 231.74 3.23E-13 71416000 150655 234560 175121 190646 200020 235540 291360 209998 292210 280010 TRUE FALSE 162189.2626 222912.0915 180959.4467 175069.612 192166.2098 244503.6398 253104.082 237445.4596 317625.8976 270873.2966 0.59876431 0.8229386 0.66805938 0.646315507 0.709432093 0.902649478 0.934400272 0.87659235 1.17259952 1 18.04725865 -7.147710805 1.018716896 1.037354436 0.683210643 0.744727373 0.086416563 0.279545786 0.579027489 0.058927654 0.036985413 7.12E-08 7.147710805 -0.354143793 STTSVS(ph)EEDVSSR ddPTM_A459_MK2206_30min_R1 2 STTSVSEEDVSSR 13 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 STTS(0.007)VS(0.992)EEDVSSR;STTS(0.013)VS(0.986)EEDVSSR 206.45 1.23E-05 30385000 4636.3 4295 4331.1 4108.8 4830.2 4149 4823.1 4701.8 4529.4 3485 TRUE FALSE 4241.958339 4015.394719 4037.116999 4425.260488 4637.802906 4383.912795 4501.359799 4660.692658 5000.247339 3916.74811 1.083030672 1.025185845 1.030731843 1.129830248 1.184095269 1.119273609 1.149259455 1.189939339 1.276632348 1 11.93544063 -5.874720541 4.213270766 1.160529075 1.044364708 0.334941133 0.066850795 0.226453806 7.17390614 0.018638353 0.028748925 1.33E-06 5.874720541 -0.116164367 STTSVS(ph)EEDVSSR ddPTM_A459_MK2206_30min_R2 2 STTSVSEEDVSSR 13 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 S(0.011)T(0.002)T(0.044)S(0.006)VS(0.938)EEDVSSR;ST(0.002)T(0.022)S(0.456)VS(0.52)EEDVSSR 177.93 0.00010533 53521000 53956 55355 51963 54234 53896 52184 59568 48065 47105 53460 TRUE FALSE 58086.91285 52606.15119 53695.42048 49802.90871 51779.77223 54169.89869 51746.65005 54347.26053 51202.10775 51715.60458 1.123198952 1.017220076 1.038282757 0.963015112 1.001240779 1.047457516 1.000600311 1.050887077 0.990070757 1 15.65831204 -4.75798966 5.292289579 1.012998218 1.129522756 0.622297618 0.025979154 0.110562824 9.018869349 0.00641636 0.047628343 1.75E-05 4.75798966 0.116524538 STTT(ph)GHLIYK ddPTM_A459_MK2206_30min_R2 1 STTTGHLIYK 10 0 P68104;A0A087WVQ9;Q5VTE0;A0A087WV01;A0A2U3TZH3;Q05639;A6PW80;Q5JR01;A0A2R8Y660;A0A2R8Y488;A0A2R8YDN5 P68104 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha;Elongation factor 1-alpha 2 1 STT(0.009)T(0.991)GHLIYK 164.43 0.00087853 5275400 31681 43495 34341 55355 50330 51794 62065 46474 39135 44410 TRUE FALSE 34106.52172 41335.10155 35485.9118 50832.31943 48353.79131 53765.05696 53915.79095 52548.31137 42538.89156 42960.90534 0.793896717 0.962156203 0.826004748 1.183222724 1.125530082 1.251487988 1.254996619 1.223165828 0.990176795 1 15.39073678 -5.76450492 24.99246652 1.164205055 0.870832888 0.641773735 0.097320643 45.76666169 373127.1656 0.026727488 0.04162993 1.72E-06 5.76450492 -0.293372167 STTTGHLIYK ddPTM_A459_MK2206_30min_R1 2 STTTGHLIYK 10 0 P68104;A0A087WVQ9;Q5VTE0;A0A087WV01;A0A2U3TZH3;Q05639;A6PW80;Q5JR01;A0A2R8Y660;A0A2R8Y488;A0A2R8YDN5 P68104 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 ; 117.7 0.0083494 79401000 36357 22001.7 26900 22364.9 44517 39390 41442 35791 21080.7 18897.1 FALSE TRUE 33264.64623 20569.38533 25074.10295 24087.44847 42743.79362 41620.22776 38677.4798 35478.08306 23272.1142 21238.21541 1.566263718 0.968508179 1.180612517 1.134155954 2.01258876 1.959685734 1.821126636 1.670483248 1.095765993 1 14.37437493 -6.234336193 24.37863814 1.656512372 1.192695751 0.214028003 0.344213402 714.2075254 642411.2516 0.101842221 0.131439025 5.83E-07 6.234336193 -0.463816621 STTTGHLIYK ddPTM_A459_MK2206_30min_R2 1 STTTGHLIYK 10 0 P68104;A0A087WVQ9;Q5VTE0;A0A087WV01;A0A2U3TZH3;Q05639;A6PW80;Q5JR01;A0A2R8Y660;A0A2R8Y488;A0A2R8YDN5 P68104 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 96.342 0.03063 30847000 84005 158560 127010 193790 193370 200590 199050 146220 171970 133190 FALSE TRUE 90436.48739 150686.141 131244.45 177956.7371 185777.3222 208223.593 172914.4959 165331.456 186927.6397 128844.0212 0.701906744 1.169523735 1.018630502 1.381179627 1.44187771 1.616090456 1.342045167 1.283190749 1.450805695 1 16.97526607 -4.482447555 0.85850174 1.379992951 0.059951768 0.549720537 0.172385288 2.631093657 1.06316782 0.06045562 3.699835422 3.29E-05 4.482447555 -1.320041183 STVGSSDNS(ph)SPQPLK ddPTM_A459_MK2206_30min_R1 2 STVGSSDNSSPQPLK 15 0 Q9UHG0 Q9UHG0 DCDC2 Doublecortin domain-containing protein 2 1 STVGSSDNS(0.659)S(0.34)PQPLK;STVGSSDNS(0.5)S(0.5)PQPLK 209.22 1.45E-06 17084800 4893.2 4829.8 4717.3 4549.1 5008 4417.7 5326.4 5093.1 4570.3 4203.9 TRUE FALSE 4477.007645 4515.379142 4397.102819 4899.47247 4808.520755 4667.826356 4971.085575 5048.571564 5045.39904 4724.71087 0.947572829 0.955694278 0.93066072 1.036988845 1.017738627 0.987960213 1.052145986 1.06854614 1.067874666 1 12.20601033 -5.943800847 0.787171892 1.046985652 0.932912459 0.613129322 0.029795303 0.542469935 0.652744313 0.015439573 0.040991529 1.14E-06 5.943800847 -0.114073193 STVGSSDNS(ph)SPQPLK ddPTM_A459_MK2206_30min_R2 2 STVGSSDNSSPQPLK 15 0 Q9UHG0 Q9UHG0 DCDC2 Doublecortin domain-containing protein 2 1 STVGSSDNS(0.982)S(0.018)PQPLK;STVGSSDNS(0.506)S(0.494)PQPLK 280.5 3.43E-55 34356000 119766 117851 114883 143514 124921 110585 145396 108575 106651 151391 TRUE FALSE 128935.377 111998.6907 118713.1419 131788.4471 120015.9739 114793.3897 126305.3305 122766.1253 115927.3112 146451.1241 0.880398685 0.764751322 0.810599049 0.899880066 0.819495068 0.783834132 0.862440158 0.838273698 0.791576794 1 17.16005974 -10.67912326 4.203780375 1.000045852 0.827441777 0.612514515 0.041059471 29117661.45 14830.99887 13801.73127 0.009829151 2.09E-11 10.67912326 -0.172604076 STVGSSDNSS(ph)PQPLK ddPTM_A459_MK2206_30min_R1 1 STVGSSDNSSPQPLK 15 0 Q9UHG0 Q9UHG0 DCDC2 Doublecortin domain-containing protein 2 1 STVGSSDNS(0.007)S(0.993)PQPLK 241.76 3.16E-20 10399000 3568.7 3301.9 3056.7 3119.5 3962 3101.5 3932.1 3196.8 3428.7 3149.9 TRUE FALSE 3265.163325 3086.94571 2849.21972 3359.764431 3804.18515 3277.10425 3669.796784 3168.850715 3785.125635 3540.133393 0.922327766 0.871985704 0.804834 0.949050236 1.074588081 0.925700782 1.036626696 0.89512184 1.06920424 1 11.78958801 -5.96705911 7.932486544 0.994769582 0.868063527 0.502175306 0.059460381 0.178344334 36.05215324 0.015919086 0.023522769 1.08E-06 5.96705911 -0.126706055 STVGSSDNSS(ph)PQPLK ddPTM_A459_MK2206_30min_R2 2 STVGSSDNSSPQPLK 15 0 Q9UHG0 Q9UHG0 DCDC2 Doublecortin domain-containing protein 2 1 STVGSS(0.001)DNS(0.343)S(0.657)PQPLK;STVGS(0.005)S(0.031)DNS(0.061)S(0.903)PQPLK 230.86 6.33E-14 24913000 117423 119279 105655 136270 130686 117568 145435 124572 109313 140581 TRUE FALSE 126412.9952 113355.7783 109177.485 125136.3051 125554.611 122042.1326 126339.2098 140853.9881 118820.8471 135993.8535 0.929549328 0.833536042 0.802811908 0.920161477 0.923237395 0.897409181 0.929006764 1.035737899 0.873722187 1 17.05318192 -6.733815604 0.822737797 0.967035016 0.858253904 0.348491167 0.053259486 0.68180386 1.011085324 0.034688651 0.033951383 1.85E-07 6.733815604 -0.108781112 STVGSSDNSS(ph)PQPLKR ddPTM_A459_MK2206_30min_R1 2 STVGSSDNSSPQPLKR 16 1 Q9UHG0 Q9UHG0 DCDC2 Doublecortin domain-containing protein 2 1 STVGSSDNS(0.206)S(0.794)PQPLKR;STVGSSDNS(0.484)S(0.516)PQPLKR 241.66 2.55E-21 7166600 2603.7 2796.9 2595.7 2199.3 2518.9 1947.38 2322.8 2399.8 2240.53 2042.57 TRUE FALSE 2382.241642 2614.821302 2419.511116 2368.690467 2418.566879 2057.638973 2167.85025 2378.818802 2473.441111 2295.618992 1.037733897 1.13904847 1.05396894 1.031830837 1.053557619 0.896332963 0.944342357 1.036242865 1.077461512 1 11.1646675 -5.996905397 1.616223409 0.993667376 1.086338324 0.29128307 0.054162626 0.482841487 2.546646902 0.019728115 0.033581982 1.01E-06 5.996905397 0.092670948 STVGSSDNSS(ph)PQPLKR ddPTM_A459_MK2206_30min_R2 3 STVGSSDNSSPQPLKR 16 1 Q9UHG0 Q9UHG0 DCDC2 Doublecortin domain-containing protein 2 1 STVGS(0.018)S(0.006)DNS(0.099)S(0.876)PQPLKR;STVGSSDNS(0.081)S(0.919)PQPLKR;S(0.002)T(0.002)VGS(0.008)S(0.008)DNS(0.09)S(0.89)PQPLKR 178.47 2.00E-06 47921500 103457 134891 100837 151144 134919 129498 147701 113291 113784 159743 TRUE FALSE 111377.7475 128192.5091 104198.8553 138795.0517 129621.4021 134426.1371 128307.6813 128098.5227 123680.7266 154530.599 0.720748824 0.829560682 0.674292703 0.898171965 0.838807349 0.8698998 0.830305985 0.828952476 0.800363989 1 17.23753301 -14.52287875 0.099289612 1.547748317 0.693414013 0.497235848 0.060278044 169.1008439 1.139875651 19.58186988 1.047650695 3.00E-15 14.52287875 -0.854334304 STVTGERQS(ph)GDGQESTEPVENK ddPTM_A459_MK2206_30min_R1 4 STVTGERQSGDGQESTEPVENK 22 1 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 STVT(0.006)GERQS(0.994)GDGQESTEPVENK;STVTGERQS(1)GDGQESTEPVENK;S(0.002)T(0.002)VT(0.002)GERQS(0.982)GDGQES(0.011)T(0.003)EPVENK;STVT(0.001)GERQS(0.998)GDGQESTEPVENK 137.86 7.16E-06 276084000 15455.9 15916.9 15671.1 13663.7 17094.9 15834.2 15960.2 14772 11858.3 9509.4 TRUE FALSE 14141.29454 14880.70692 14607.38939 14716.08054 16413.97393 16730.71872 14895.52418 14642.84996 13091.01272 10687.49626 1.323162525 1.392347333 1.366773754 1.37694369 1.535810963 1.565447913 1.393733744 1.370091703 1.224890507 1 13.3836363 -8.523689056 1.582395266 1.001661888 1.426495321 0.776411071 0.070879066 0.205448828 1.143740426 0.075743142 0.022104825 2.99E-09 8.523689056 0.424833432 STVTGERQS(ph)GDGQESTEPVENK ddPTM_A459_MK2206_30min_R2 5 STVTGERQSGDGQESTEPVENK 22 1 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 S(0.031)T(0.031)VT(0.149)GERQS(0.788)GDGQES(0.001)TEPVENK;S(0.01)T(0.01)VT(0.151)GERQS(0.771)GDGQES(0.026)T(0.032)EPVENK;STVT(0.006)GERQS(0.992)GDGQES(0.001)TEPVENK;S(0.007)T(0.007)VT(0.061)GERQS(0.904)GDGQES(0.014)T(0.007)EPVENK;STVT(0.003)GERQS(0.997)GDGQESTEPVENK 87.92 0.00028437 335520200 153459.2 264142 213749 310746 285917 290434 277796 252729 253054 224874 TRUE FALSE 165208.1543 251025.0924 220875.285 285357.0578 274690.462 301486.6694 241321.0515 285761.548 275064.1795 217536.3798 0.759450693 1.153945343 1.015348721 1.311767062 1.262733444 1.385913794 1.109336524 1.313626476 1.264451398 1 17.73089717 -4.281918824 1.018832426 1.24190882 6.61E-18 0.540977659 0.122823754 3.273055469 1.362640402 0.037205489 5.662253532 5.22E-05 4.281918824 -1.24190882 SVAAEGALLPQT(ph)PPSPR ddPTM_A459_MK2206_30min_R2 2 SVAAEGALLPQTPPSPR 17 0 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 SVAAEGALLPQT(0.686)PPS(0.314)PR;S(0.001)VAAEGALLPQT(0.897)PPS(0.102)PR 182.47 1.62E-07 17603600 46304 61442 52887 57321 61227 54904 59431 48784 54752 56704 TRUE FALSE 49849.06984 58390.87963 54650.22618 52637.69094 58822.92034 56993.41019 51627.63831 55160.2363 59514.22999 54853.75312 0.908763157 1.064482853 0.996289644 0.959600537 1.072359082 1.039006576 0.941186981 1.005587278 1.08496186 1 15.74330271 -4.744315084 24.92424399 1.015764201 0.908762825 0.344996397 0.045113715 1269.121284 1847091.62 0.011321198 0.331285791 1.80E-05 4.744315084 -0.107001376 SVAAEGALLPQTPPS(ph)PR ddPTM_A459_MK2206_30min_R1 2 SVAAEGALLPQTPPSPR 17 0 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 SVAAEGALLPQT(0.002)PPS(0.998)PR;SVAAEGALLPQT(0.039)PPS(0.961)PR 173.34 4.15E-07 59682000 7907.9 7662.6 8108.8 6957 8896.5 8107.9 8459.9 7195.5 7097.4 6199.9 TRUE FALSE 7235.291579 7163.763347 7558.397248 7492.829345 8542.133566 8566.962291 7895.555507 7132.590502 7835.200128 6967.990419 1.038361298 1.028096039 1.084731292 1.075321419 1.225910636 1.229473891 1.13311802 1.023622318 1.124456214 1 12.76652692 -2.212562537 19.58421084 1.102487417 0.265830022 0 0.077590334 0 0 0.019233425 0 0.006129675 2.212562537 -0.836657394 SVAAEGALLPQTPPS(ph)PR ddPTM_A459_MK2206_30min_R2 3 SVAAEGALLPQTPPSPR 17 0 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 SVAAEGALLPQT(0.001)PPS(0.999)PR;SVAAEGALLPQT(0.362)PPS(0.638)PR;SVAAEGALLPQTPPS(1)PR 233.38 1.01E-16 46463000 120617 143525 134187 152231 148492 138433 154766 120607 148029 124901 TRUE FALSE 129851.5303 136397.7572 138660.7276 139793.2403 142661.458 143701.1648 134445.0383 136370.749 160904.2948 120825.4906 1.074703108 1.128882296 1.147611542 1.15698467 1.180723184 1.189328213 1.112720814 1.128658765 1.331708185 1 16.88256533 -4.539363263 1.175289874 1.162852012 0.991214758 0.090791552 0.077339442 5.83034488 4.717167147 0.022284972 1.405954824 2.89E-05 4.539363263 -0.171637254 SVAPLPPQRS(ph)PR ddPTM_A459_MK2206_30min_R2 2 SVAPLPPQRSPR 12 1 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 SVAPLPPQRS(1)PR;SVAPLPPQRS(1)PR 95.195 0.010042 14935700 152848 159728 154703 169253 182148 149415 188924 158545 185379 191674 TRUE FALSE 164550.1604 151796.1398 159860.7208 155424.4885 174995.9543 155101.0925 164118.0519 179267.3759 201502.9303 185419.6931 0.887447054 0.818662448 0.862156107 0.838230751 0.943783001 0.836486621 0.885116619 0.966819505 1.086739639 1 17.50043495 -7.89983643 2.737655143 1.042120656 0.86468089 0.776780109 0.038370265 0.118699795 1.737980456 0.025902798 0.010246574 1.26E-08 7.89983643 -0.177439766 SVAS(ph)NQSEMEFSSLQDMPK ddPTM_A459_MK2206_30min_R1 1 SVASNQSEMEFSSLQDMPK 19 0 Q8N163-2;Q8N163;G3V119;H0YB24;A0A087X2B6 Q8N163-2 CCAR2 Cell cycle and apoptosis regulator protein 2 1 S(0.201)VAS(0.784)NQS(0.015)EMEFSSLQDMPK 127.3 0.00023237 5037000 2587 2474.5 2947.4 2399.5 2634.3 2277.4 2487.4 2741.6 2794.9 2245.8 TRUE FALSE 2366.962065 2313.4096 2747.3387 2584.309906 2529.370253 2406.34442 2321.470085 2717.63048 3085.439857 2524.026659 0.937772213 0.916555137 1.088474518 1.02388376 1.002117091 0.9533752 0.919748639 1.076704349 1.222427602 1 11.30151143 -7.948692643 6.681782152 1.123809394 0.981754321 0.390479505 0.070359969 0.181484112 17.91332803 0.039447281 0.018567255 1.13E-08 7.948692643 -0.142055073 SVAS(ph)NQSEMEFSSLQDMPK ddPTM_A459_MK2206_30min_R2 1 SVASNQSEMEFSSLQDMPK 19 0 Q8N163-2;Q8N163;G3V119;H0YB24;A0A087X2B6 Q8N163-2 CCAR2 Cell cycle and apoptosis regulator protein 2 1 S(0.191)VAS(0.741)NQS(0.068)EMEFSSLQDMPK 80.102 0.015797 0 18848 27474 24313 26490 24487 17279 29169 25550 26608 21716 TRUE FALSE 20291.01737 26109.68111 25123.58329 24325.68226 23525.51734 17936.56445 25339.07526 28889.47273 28922.31574 21007.4087 0.965898158 1.242879666 1.195939187 1.1579573 1.119867647 0.853820893 1.206197091 1.375204012 1.376767414 1 14.35861059 -7.517296654 24.90755588 1.283731573 1.099406264 0.198017214 0.144711155 348.1509971 1553489.07 0.065972659 0.039618425 3.04E-08 7.517296654 -0.184325309 SVAS(ph)SQPAKPTK ddPTM_A459_MK2206_30min_R1 2 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 SVAS(0.972)S(0.028)QPAKPTK;SVAS(0.976)S(0.024)QPAKPTK 208.27 3.96E-05 49284000 8602 8271.6 9000.4 7595.8 7879.6 7280.4 8183.9 8190.9 6997.8 6930.4 TRUE FALSE 7870.354729 7733.117337 8389.477925 8180.829832 7565.738847 7692.609956 7637.966963 8119.287825 7725.246352 7788.990274 1.010446085 0.992826678 1.077094415 1.050306849 0.971337565 0.987626083 0.980610669 1.042405696 0.991816151 1 12.9272206 -6.25371891 24.98764487 0.996601547 1.032995941 0.305400583 0.027337548 855.7818306 2769773.912 0.008730743 0.011056374 5.58E-07 6.25371891 0.036394394 SVASSQPAKPT(ph)K ddPTM_A459_MK2206_30min_R2 2 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 SVAS(0.428)S(0.001)QPAKPT(0.571)K;SVAS(0.045)SQPAKPT(0.955)K 177.42 0.0010742 68215000 98283 106151 108670 100727 97088 86832 118054 95333 95568 106147 TRUE FALSE 105807.622 100879.6957 112293.0036 92497.28189 93275.83729 90136.45261 102553.368 107793.3504 103880.3319 102683.4321 1.030425453 0.982434008 1.09358444 0.900800451 0.908382544 0.877809115 0.998733349 1.049763806 1.011656212 1 16.6478439 -10.36716665 11.30577736 0.99999315 0.981537525 0.004465779 0.065903498 0 0 0.069355825 0.016821258 4.29E-11 10.36716665 -0.018455625 SVAVS(ph)DEEEVEEEAER ddPTM_A459_MK2206_30min_R2 1 SVAVSDEEEVEEEAER 16 0 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 S(0.142)VAVS(0.858)DEEEVEEEAER 146.1 0.00035622 10243000 12122 14250 11147 15381 16043 17346 19599 15493 14000 15014 TRUE FALSE 13050.06964 13542.36572 11518.63542 14124.3231 15413.07121 18006.11418 17025.62776 17517.9883 15217.69469 14524.09441 0.898511761 0.932406892 0.793070817 0.972475302 1.061207038 1.239740921 1.172233344 1.206132913 1.047755148 1 13.82616059 -6.250900898 2.470118988 1.147357225 0.882090098 0.6759816 0.077137225 0.156920949 1.889949868 0.024654244 0.031530105 5.61E-07 6.250900898 -0.265267127 SVCPGGS(ph)SPGSSSGGGR ddPTM_A459_MK2206_30min_R1 2 SVCPGGSSPGSSSGGGR 17 0 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 S(0.01)VCPGGS(0.495)S(0.495)PGSSSGGGR;SVCPGGS(0.498)S(0.498)PGS(0.002)S(0.001)S(0.001)GGGR 178.47 8.55E-08 17484000 4459.67 3757.3 3912.49 3436.57 3917.59 3421.89 3882.8 3612.86 2875.99 2763.52 TRUE FALSE 4080.351648 3512.699087 3646.92108 3701.255217 3761.544095 3615.634455 3623.785497 3581.273146 3174.959452 3105.885721 1.313748159 1.130981434 1.174196802 1.191690728 1.211101899 1.164123467 1.166747853 1.153060179 1.022239624 1 11.60078903 -8.222029999 1.942914872 0.994189951 1.190829227 0.71391794 0.045531698 0.174907463 1.196709011 0.040401865 0.012013058 6.00E-09 8.222029999 0.196639276 SVCPGGS(ph)SPGSSSGGGR ddPTM_A459_MK2206_30min_R2 3 SVCPGGSSPGSSSGGGR 17 0 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 SVCPGGS(0.5)S(0.5)PGSSSGGGR;SVCPGGS(0.499)S(0.499)PGS(0.002)SSGGGR;SVCPGGS(0.5)S(0.5)PGSSSGGGR 246.75 2.42E-30 21862400 48183 49792 49880 53032 43313 49058 48601 38525 44245 38742.1 TRUE FALSE 51871.92753 47319.40168 51542.9743 48699.11596 41612.31399 50924.93657 42219.63032 43560.34978 48093.35012 37477.94845 1.384065288 1.262593169 1.375288041 1.299407197 1.110314617 1.358797337 1.126519248 1.162292804 1.283243937 1 15.19375436 -12.80636586 0.044721292 6.98E-11 1.91616551 0.538506206 0.083829376 380.8824555 1.732952642 60.05436738 22.21815158 1.56E-13 12.80636586 1.916165509 SVCPGGSSPGSS(ph)SGGGR ddPTM_A459_MK2206_30min_R2 1 SVCPGGSSPGSSSGGGR 17 0 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 SVCPGGS(0.004)S(0.004)PGS(0.176)S(0.675)S(0.14)GGGR 71.143 0.030375 1561900 2925.8 5024.7 4835.7 4808.7 6330.2 4603.7 3674.8 3400.8 4816.2 3416.7 TRUE FALSE 3149.801498 4775.180705 4996.919824 4415.813828 6081.644541 4778.897029 3192.294346 3845.296237 5235.10437 3305.213359 0.952979779 1.444742044 1.511829731 1.336014759 1.840015721 1.445866427 0.96583609 1.163403333 1.583893021 1 11.69052769 -7.210143251 23.95456339 1.191899975 1.442134187 0.175076498 0.256148861 392.0221868 183068.4832 0.09927009 0.076894152 6.16E-08 7.210143251 0.250234212 SVDETLR ddPTM_A459_MK2206_30min_R2 1 SVDETLR 7 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5;Q13162;H7C3T4 Q06830;Q13162 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 0 139.31 0.041779 16352000 98222 111790 102850 110770 100330 125260 117660 92101 104430 110620 FALSE TRUE 105741.9518 106238.6712 106278.9677 101719.7367 96390.54008 130026.8571 102211.1007 104138.9169 113513.1326 107010.4785 0.988145772 0.992787554 0.99316412 0.950558657 0.900757958 1.215085279 0.955150394 0.973165604 1.060766518 1 16.70739255 SVDISLGDS(ph)PRR ddPTM_A459_MK2206_30min_R1 2 SVDISLGDSPRR 12 1 E9PKC0;Q6IQ23;Q6IQ23-2;H0YDE2;A0A1B0GTN9;Q6IQ23-3 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 SVDISLGDS(1)PRR;SVDISLGDS(1)PRR 93.106 0.010654 13895400 15027.1 9213 8593.5 13168.4 10172.5 13221 9671.7 9187 7193.4 6138.6 TRUE FALSE 13748.96623 8613.232025 8010.197163 14182.63245 9767.307784 13969.56159 9026.51854 9106.679028 7941.179672 6899.096112 1.992864864 1.248458042 1.161050235 2.055723274 1.415737312 2.024839395 1.308362486 1.31998147 1.15104639 1 12.75219164 -7.805212829 1.784975403 1.093139733 1.61401409 0.343716887 0.307736011 0.462526589 2.806166717 0.236774682 0.091235362 1.57E-08 7.805212829 0.520874357 SVDISLGDS(ph)PRR ddPTM_A459_MK2206_30min_R2 2 SVDISLGDSPRR 12 1 E9PKC0;Q6IQ23;Q6IQ23-2;H0YDE2;A0A1B0GTN9;Q6IQ23-3 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 SVDISLGDS(1)PRR;SVDISLGDS(1)PRR 136.57 0.00071691 11662600 29469.2 39351.5 30111 39406.3 35162.1 40055.8 33386 28535.7 38446.2 29055 TRUE FALSE 31725.38461 37397.36173 31114.88571 36186.67924 33781.45928 41580.15154 29002.3781 32265.41397 41790.18098 28106.93773 1.128738567 1.330538463 1.10701799 1.287464312 1.201890423 1.479355451 1.03185834 1.14795195 1.486827963 1 14.77863866 -10.4036987 5.027355761 0.999999431 1.24091198 0.202279474 0.145570648 96794013.49 8.206990633 637.8728614 0.033624543 3.95E-11 10.4036987 0.240912548 SVDQGGGGS(ph)PR ddPTM_A459_MK2206_30min_R1 2 SVDQGGGGSPR 11 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 SVDQGGGGS(1)PR;SVDQGGGGS(1)PR 101.72 0.014994 9503500 8164.8 5476.3 4868 4807.2 3795.9 3908.5 6690.7 6806.6 1715.56 3842.2 TRUE FALSE 7470.340885 5119.791875 4537.573723 5177.451377 3644.701265 4129.795892 6244.375611 6747.090614 1893.898601 4318.200743 1.729966097 1.185630817 1.050801941 1.198983485 0.844032383 0.956369594 1.446059593 1.562477294 0.438585122 1 12.0762146 -4.758698487 3.379496652 1.089933602 1.832295388 0.309699006 0.295693958 0.443000855 7.780171348 0.074597312 0.887169954 1.74E-05 4.758698487 0.742361786 SVDQGGGGS(ph)PR ddPTM_A459_MK2206_30min_R2 4 SVDQGGGGSPR 11 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 SVDQGGGGS(1)PR;SVDQGGGGS(1)PR;SVDQGGGGS(1)PR;SVDQGGGGS(1)PR 139.48 0.0011653 118154300 74894 60246.4 67102 73611 101462 82862 84252 125641 118168 97924 TRUE FALSE 80627.94222 57254.65138 69339.14719 67596.74583 97478.09207 86015.37147 73189.6112 142062.7101 128446.039 94728.7479 0.851145444 0.604406293 0.731975759 0.713582174 1.029023335 0.908017612 0.772623019 1.49967896 1.355935151 1 16.53151469 -7.751074719 24.99812109 1.320855292 0.800743238 0.657439872 0.159368041 113.0919722 272763.7604 0.077544612 0.044140071 1.77E-08 7.751074719 -0.520112054 SVDS(ph)LPR ddPTM_A459_MK2206_30min_R1 1 SVDSLPR 7 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 SVDS(1)LPR 88.819 0.031777 1879900 2044.5 1733.2 1606.7 1412.1 1758.6 1282.9 1616.6 1545.8 1256.9 1237.6 TRUE FALSE 1870.604539 1620.368365 1497.641681 1520.860187 1688.551238 1355.536689 1508.759564 1532.285234 1387.559253 1390.923231 1.344865408 1.164958877 1.076724902 1.093417776 1.213978744 0.974558954 1.08471807 1.101631779 0.997581478 1 10.44182708 -1.522878745 0.749888721 1.063168283 50.14960261 0.64333964 0.063748181 243.022092 1.051169492 0.023689414 20150.45266 0.03 1.522878745 49.08643433 SVEDEMDS(ph)PGEEPFYTGQGR ddPTM_A459_MK2206_30min_R1 2 SVEDEMDSPGEEPFYTGQGR 20 0 A0A590UJA3;S4R3W2;A0A590UJU2;A0A590UK38;B1AKN5;A0A590UK09;B1AKN8;Q12857-2;Q12857-3;Q12857;Q12857-4;A0A590UK73;B1AKN7 A0A590UJA3 NFIA Nuclear factor 1;Nuclear factor 1 A-type 1 SVEDEMDS(1)PGEEPFYTGQGR;SVEDEMDS(1)PGEEPFYTGQGR 269.59 6.34E-59 27664000 3218.3 3334.68 3537.09 2958.67 3427.93 2961.2 3896.79 3337.02 3202.93 2889.57 TRUE FALSE 2944.566685 3117.591726 3297.002186 3186.547276 3291.388289 3128.860585 3636.842249 3307.844786 3535.886035 3247.551747 0.906703546 0.959982155 1.01522699 0.981215243 1.013498335 0.963452111 1.119871994 1.01856569 1.088785125 1 11.6651368 -2.203285227 0.358819457 1.049170317 1.37E-10 0.483394477 0.042249074 32.81678883 0.72967192 0.034415525 21.67748427 0.006262025 2.203285227 -1.049170317 SVEDEMDS(ph)PGEEPFYTGQGR ddPTM_A459_MK2206_30min_R2 2 SVEDEMDSPGEEPFYTGQGR 20 0 A0A590UJA3;S4R3W2;A0A590UJU2;A0A590UK38;B1AKN5;A0A590UK09;B1AKN8;Q12857-2;Q12857-3;Q12857;Q12857-4;A0A590UK73;B1AKN7 A0A590UJA3 NFIA Nuclear factor 1;Nuclear factor 1 A-type 1 SVEDEMDS(1)PGEEPFYTGQGR;SVEDEMDS(1)PGEEPFYTGQGR 248.7 7.03E-38 7789800 34977 39836 36714 50217 40586 46507 45378 39675 37026 45840 TRUE FALSE 37654.86601 37857.80217 37938.02644 46114.11046 38992.38971 48276.85647 39419.81409 44860.65872 40246.45455 44344.24455 0.849148889 0.85372527 0.855534395 1.039911964 0.879311173 1.088683705 0.888949953 1.011645574 0.90759139 1 15.43645925 -5.736315658 23.88674642 0.9715363 0.852894893 0.432466998 0.06344628 122.8189499 116770.1452 0.015710499 0.027193471 1.84E-06 5.736315658 -0.118641407 SVEDVRPHHT(ph)DANNQSACFEAPDQK ddPTM_A459_MK2206_30min_R2 1 SVEDVRPHHTDANNQSACFEAPDQK 25 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.237)VEDVRPHHT(0.746)DANNQS(0.018)ACFEAPDQK 63.122 0.0049859 4847600 7184.7 9165.7 9290 10741 9671.8 12026 13064 7205.8 8705 10888 TRUE FALSE 7734.766156 8710.544666 9599.723963 9863.425941 9292.036535 12483.65786 11348.68111 8147.622801 9462.145165 10532.72545 0.734355623 0.826998169 0.911418797 0.93645524 0.88220628 1.185225791 1.077468615 0.773553136 0.898356765 1 13.36259118 -4.968389916 1.057310554 0.970265795 0.660788906 0.344983638 0.104986882 1.754967189 1.984813997 0.03805445 0.570496782 1.08E-05 4.968389916 -0.309476889 SVEST(ph)SPEPSK ddPTM_A459_MK2206_30min_R1 4 SVESTSPEPSK 11 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;P18583-8 P18583-10 SON Protein SON 1 SVES(0.001)T(0.938)S(0.061)PEPSK;SVES(0.001)T(0.499)S(0.499)PEPSK;SVES(0.001)T(0.499)S(0.499)PEPSK;SVES(0.001)T(0.5)S(0.5)PEPSK 230.81 6.83E-07 456838000 43340.1 43866 44507.1 38775.8 40523.8 35733.9 40957.8 39489.5 36398.7 32512.2 TRUE FALSE 39653.79691 41010.31543 41486.08206 41762.31883 38909.65124 37757.12254 38225.57989 39144.24746 40182.47512 36540.05679 1.08521443 1.122338579 1.135358992 1.142918827 1.064849227 1.033307714 1.046128092 1.071269475 1.099682886 1 15.15719126 -6.358943474 5.481756888 1.053933893 1.122307684 0.59499794 0.027931762 0.168724125 7.614528082 0.008896091 0.010119594 4.38E-07 6.358943474 0.06837379 SVEST(ph)SPEPSK ddPTM_A459_MK2206_30min_R2 4 SVESTSPEPSK 11 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;P18583-8 P18583-10 SON Protein SON 1 SVES(0.002)T(0.592)S(0.403)PEPS(0.003)K;SVES(0.001)T(0.5)S(0.5)PEPSK;SVES(0.002)T(0.98)S(0.018)PEPSK;SVES(0.003)T(0.607)S(0.388)PEPS(0.001)K 215.77 4.42E-05 349281000 516972 578778 524306 560933 534096 466226 602427 467822 455118 543487 TRUE FALSE 556551.7738 550036.7261 541786.1004 515102.9796 513124.7074 483968.5571 523327.6113 528967.9417 494703.341 525753.0637 1.058580182 1.046188342 1.030495375 0.979743182 0.975980442 0.920524464 0.995386708 1.006114806 0.940942384 1 19.00402583 -5.674682456 2.315948383 0.971878728 1.052342127 0.63750726 0.024921107 0.190808404 2.072018643 0.007486763 0.015188748 2.12E-06 5.674682456 0.080463399 SVESTS(ph)PEPSK ddPTM_A459_MK2206_30min_R2 2 SVESTSPEPSK 11 0 P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;P18583-6;P18583-8 P18583-10 SON Protein SON 1 SVES(0.001)T(0.016)S(0.982)PEPSK;SVEST(0.015)S(0.985)PEPSK 186.76 1.92E-05 90732000 113960 139731 135366 145358 139770 115063 144737 107181 103907 129168 TRUE FALSE 122684.8652 132792.1617 139879.0349 133481.7864 134281.9275 119441.8031 125732.858 121189.9247 112944.643 124953.2587 0.981846064 1.062734682 1.119450875 1.068253744 1.074657267 0.955891861 1.006239127 0.969882066 0.903895138 1 16.931029 -6.760631882 24.99952721 0.967740351 1.06507041 0.56927311 0.0409085 16.38920094 507409.0595 0.014343945 0.013553035 1.74E-07 6.760631882 0.097330058 SVFGT(ph)PTLETANK ddPTM_A459_MK2206_30min_R2 1 SVFGTPTLETANK 13 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.03)VFGT(0.901)PT(0.069)LET(0.001)ANK 134.9 0.0027492 5007000 34589 37021 28636 35284 35625 31432 30994 24744 23695 30676 TRUE FALSE 37237.16043 35182.59097 29590.70995 32401.18433 34226.1835 32628.16679 26924.45057 27978.12576 25755.94827 29675.04463 1.254830815 1.185595217 0.99715806 1.091866406 1.153365864 1.09951534 0.907309522 0.942816636 0.867932924 1 14.85696258 -7.206139264 4.653716987 0.924233133 1.128359309 0.667866057 0.069521389 0.139260858 6.457932864 0.029244936 0.021963251 6.22E-08 7.206139264 0.204126176 SVFWASS(ph)PYR ddPTM_A459_MK2206_30min_R1 2 SVFWASSPYR 10 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3 O15027 SEC16A Protein transport protein Sec16A 1 SVFWAS(0.148)S(0.852)PYR;SVFWAS(0.033)S(0.967)PYR 100.82 0.017018 36503000 5930.8 7421.2 6394.3 6142.9 7014.8 6323.2 6469 6597.6 6480.7 6702 TRUE FALSE 5426.354316 6938.078531 5960.272732 6616.027222 6735.385662 6681.21412 6037.464813 6539.917879 7154.391956 7532.294358 0.720411877 0.921110913 0.791295779 0.878354842 0.894201068 0.887009164 0.801543929 0.868250438 0.949829045 1 12.87887367 -14.52287875 0.08092721 1.484180585 0.715510401 0.465909303 0.056644368 241.2063434 1.374674917 20.59201213 1.860751105 3.00E-15 14.52287875 -0.768670185 SVGDES(ph)WEQTQEGDVGALYHEQLALK ddPTM_A459_MK2206_30min_R1 1 SVGDESWEQTQEGDVGALYHEQLALK 26 0 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 SVGDES(0.997)WEQT(0.003)QEGDVGALYHEQLALK 145.29 7.46E-11 5046000 703.02 968.15 944.75 845.92 617.41 856.63 633.21 705.99 739.11 588.66 TRUE FALSE 643.2244573 905.123259 880.6230022 911.072905 592.8172523 905.1316503 590.9697163 699.8176039 815.9431294 661.587645 0.972243757 1.368107863 1.331075344 1.377100845 0.896052483 1.368120546 0.893259904 1.057785177 1.233310712 1 9.369788482 -6.244894833 24.96197688 1.083237592 1.274626183 0.219282934 0.172118537 1244.023851 1876949.624 0.049283034 0.063448633 5.69E-07 6.244894833 0.191388591 SVGDGETVEFDVVEGEK ddPTM_A459_MK2206_30min_R1 2 SVGDGETVEFDVVEGEK 17 0 H0Y449;P67809;A0A0D9SEI8;Q9Y2T7;P16989-2;P16989;P16989-3 H0Y449;P16989-2 YBX1;YBX3;YBX2 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 0 ; 242.43 1.22E-21 11772200 1872.31 2101.22 1777.36 1520.47 1856.67 1546.61 1812.98 1719.21 1668.48 1602.28 FALSE TRUE 1713.060203 1964.430196 1656.717755 1637.576863 1782.714902 1634.177722 1692.039412 1704.179128 1841.924467 1800.782543 0.951286544 1.090875855 0.919998787 0.909369579 0.989966784 0.907481988 0.939613402 0.946354758 1.022846692 1 10.81440826 -8.261199387 24.99998805 1.01142335 0.957404982 0.155695395 0.050804274 42.3060455 4408308.912 0.041333553 0.013298715 5.48E-09 8.261199387 -0.054018368 SVGGDS(ph)DTEDMR ddPTM_A459_MK2206_30min_R2 2 SVGGDSDTEDMR 12 0 Q9UK61-3;Q9UK61;Q9UK61-2;A0A087X0F1;Q9UK61-4 Q9UK61-3 FAM208A Protein FAM208A 1 S(0.002)VGGDS(0.936)DT(0.062)EDMR;SVGGDS(0.979)DT(0.021)EDMR 231.74 4.27E-10 36474000 64244 76720 75213 83285 83474 84309 100368 77102 77496 85457 TRUE FALSE 69162.57004 72910.19636 77720.56388 76480.34908 80196.39134 87517.43807 87189.56104 87179.49613 84236.462 82668.54509 0.836624982 0.881958141 0.940146749 0.925144491 0.970095594 1.058654631 1.054688466 1.054566716 1.018966306 1 16.33505088 -5.924805233 0.827195531 1.044060544 0.845774445 0.862488025 0.027188829 0.269594069 0.35842768 0.013631833 0.036206336 1.19E-06 5.924805233 -0.198286099 SVGGS(ph)GGGSFGDNLVTR ddPTM_A459_MK2206_30min_R1 1 SVGGSGGGSFGDNLVTR 17 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.085)VGGS(0.608)GGGS(0.307)FGDNLVTR 172.55 5.36E-07 24103000 3247.4 3326.4 3093.1 3109.7 3246.5 2624.9 2920.4 2476 2390.4 2234.4 TRUE FALSE 2971.191577 3109.850755 2883.14899 3349.209633 3117.18503 2773.51957 2725.585445 2454.352593 2638.890634 2511.214341 1.183169246 1.238385233 1.14810948 1.333701221 1.241305841 1.10445354 1.085365514 0.977356872 1.050842451 1 11.29416946 -7.068646655 1.928428414 1.018581381 1.230453109 0.767823984 0.052231615 0.163917243 1.211281642 0.024623804 0.01805492 8.54E-08 7.068646655 0.211871728 SVGGS(ph)GGGSFGDNLVTR ddPTM_A459_MK2206_30min_R2 1 SVGGSGGGSFGDNLVTR 17 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.029)VGGS(0.971)GGGS(0.001)FGDNLVTR 169.6 9.90E-07 13925000 11774 16104 16794 16148 12719 15553 14972 12057 13697 17776 TRUE FALSE 12675.42649 15304.29878 17353.90358 14828.65675 12219.58815 16144.88031 13006.15842 13632.8913 14888.3403 17195.97058 0.737116084 0.88999331 1.009184303 0.862333224 0.710607645 0.938875782 0.75634919 0.792795687 0.865804011 1 14.06978293 -4.752871464 24.30787 0.860874228 0.737115748 0.148756069 0.092978857 494.292038 1402191.769 0.023441005 0.261037004 1.77E-05 4.752871464 -0.12375848 SVGGSGGGS(ph)FGDNLVTR ddPTM_A459_MK2206_30min_R1 4 SVGGSGGGSFGDNLVTR 17 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 SVGGSGGGS(1)FGDNLVTR;SVGGSGGGS(1)FGDNLVTR;SVGGS(0.064)GGGS(0.929)FGDNLVT(0.006)R;S(0.004)VGGS(0.127)GGGS(0.797)FGDNLVT(0.072)R 173.09 4.53E-07 103996000 16599.4 14724.2 15575.4 13059 14651.4 12958 11997.5 11112.3 10289.3 9310.6 TRUE FALSE 15187.53386 13765.6519 14518.18524 14064.80644 14067.80371 13691.67076 11197.16867 11015.14633 11358.90956 10464.06742 1.451398701 1.315516362 1.387432311 1.344105105 1.34439154 1.308446344 1.070058918 1.05266393 1.085515708 1 13.35315612 -7.212786234 2.792728609 1.049275059 1.364388257 0.937442042 0.039055351 0.061895488 0.955713394 0.016628211 0.011672453 6.13E-08 7.212786234 0.315113198 SVGGSGGGS(ph)FGDNLVTR ddPTM_A459_MK2206_30min_R2 2 SVGGSGGGSFGDNLVTR 17 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 SVGGS(0.013)GGGS(0.987)FGDNLVTR;S(0.001)VGGS(0.003)GGGS(0.972)FGDNLVT(0.024)R 161.14 2.25E-05 57127000 46853 72834 56980 78127 67690 57592 64003 45845 59573 52037 TRUE FALSE 50440.1017 69217.16947 58879.68476 71743.77418 65032.15049 59783.70392 55599.32922 51837.09891 64754.55186 50339.03695 1.002007681 1.375019739 1.169662519 1.425211496 1.291883088 1.187621129 1.104497277 1.029759448 1.286368508 1 15.61939 -7.02660529 3.447588727 1.108948683 1.263843451 0.221826272 0.129044289 0.35674558 8.815704601 0.049016322 0.039233053 9.41E-08 7.02660529 0.154894768 SVHIS(ph)TPEKEPCAPLTIPSIR ddPTM_A459_MK2206_30min_R2 1 SVHISTPEKEPCAPLTIPSIR 21 1 E9PHV5;P28290-3;P28290;P28290-2 E9PHV5 SSFA2 Sperm-specific antigen 2 1 S(0.038)VHIS(0.481)T(0.481)PEKEPCAPLTIPSIR 46.353 0.038227 6421700 11582 17440 13302 22991 22520 30862 24267 17366 18408 10777 TRUE FALSE 12468.72683 16573.95496 13745.48204 21112.56176 21635.75165 32036.47504 21080.71375 19635.79583 20009.09457 10425.34737 1.19600109 1.589774841 1.318467534 2.025118301 2.075302709 3.072940775 2.022063438 1.883466816 1.919273656 1 13.34780783 -5.792692732 6.404400565 2.088411102 1.389129134 0.252655831 0.481109632 0.215573066 26.7260906 0.135287395 0.207962168 1.61E-06 5.792692732 -0.699281968 SVICDIS(ph)PLR ddPTM_A459_MK2206_30min_R1 2 SVICDISPLR 10 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 SVICDIS(1)PLR;S(0.002)VICDIS(0.998)PLR 119.03 0.0055279 14361200 6959.6 5782.1 5258.7 4987.3 6605.5 5305.5 5626.9 5476.3 4856.5 4226.5 TRUE FALSE 6367.649474 5405.684239 4901.754096 5371.42271 6342.388948 5605.892825 5251.539768 5428.421286 5361.350554 4750.110728 1.340526535 1.138012259 1.031924175 1.130799473 1.335208653 1.180160452 1.105561548 1.142798894 1.128679069 1 12.21374543 -8.898016119 0.632088582 0.997179821 1.182073796 0.277561986 0.089482377 2.125619356 1.613219397 0.109894119 0.039267858 1.26E-09 8.898016119 0.184893976 SVICDIS(ph)PLR ddPTM_A459_MK2206_30min_R2 4 SVICDISPLR 10 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 SVICDIS(1)PLR;SVICDIS(1)PLR;SVICDIS(1)PLR;SVICDIS(1)PLR 97.452 0.020615 13533300 80191 92179 66883.9 80982 91467 91502 89442 70459.8 70966 89111 TRUE FALSE 86330.48462 87601.5249 69113.77584 74365.51155 87875.546 94984.17273 77698.15796 79669.13778 77138.4944 86203.31537 1.001475225 1.016219904 0.801753106 0.862675771 1.019398681 1.101862177 0.901336075 0.924200391 0.894843708 1 16.39545574 SVIEPLPVT(ph)PTR ddPTM_A459_MK2206_30min_R1 2 SVIEPLPVTPTR 12 0 H0YCM0;E9PM17;B3KNX7;Q13153;Q13153-2 H0YCM0 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 SVIEPLPVT(0.707)PT(0.293)R;SVIEPLPVT(0.99)PT(0.01)R 130.15 0.0051627 12074000 5156.9 4655.3 4351.3 3652.8 4628.8 4224.2 4688.7 3782.9 4501 4505.4 TRUE FALSE 4718.278575 4352.239124 4055.945879 3934.139289 4444.425094 4463.370554 4375.925378 3749.826504 4968.895057 5063.562966 0.931809994 0.859521083 0.801006309 0.776950798 0.877726835 0.881468362 0.864198867 0.740550977 0.981304092 1 12.30593718 -8.392884535 7.280819859 0.998774117 0.842193382 0.560477689 0.052870336 0.191755562 9.981800731 0.052054621 0.013466948 4.05E-09 8.392884535 -0.156580735 SVIEPLPVT(ph)PTR ddPTM_A459_MK2206_30min_R2 1 SVIEPLPVTPTR 12 0 H0YCM0;E9PM17;B3KNX7;Q13153;Q13153-2 H0YCM0 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 SVIEPLPVT(0.5)PT(0.5)R 108.32 0.018962 3059600 20816 24950 18534 21447 20074 17173 22617 15605 13913 18539 TRUE FALSE 22409.68896 23711.01928 19151.91431 19694.71149 19285.7939 17826.53055 19647.36073 17644.62708 15123.12759 17934.07395 1.249559304 1.322121195 1.067906509 1.09817276 1.075371606 0.994003404 1.095532492 0.983860507 0.843262252 1 14.13041563 -4.606528916 0.38542788 0.950333408 1.617114215 0.709346149 0.069607938 3.702081038 0.39357058 0.05988933 1.178653424 2.47E-05 4.606528916 0.666780807 SVKTS(ph)PTTQSK ddPTM_A459_MK2206_30min_R1 1 SVKTSPTTQSK 11 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.003)VKT(0.354)S(0.62)PT(0.019)T(0.004)QSK 158.52 0.0027263 7138800 8020.8 5746.5 4936.3 6512 2863.6 3123.5 4712.9 7219.5 329.66 1607.2 TRUE FALSE 7338.588841 5372.401806 4601.237709 7013.555368 2749.536748 3300.349871 4398.51104 7156.380673 363.9293367 1806.31207 4.062746944 2.974237894 2.547310504 3.8828038 1.52218257 1.827120532 2.435078143 3.961873916 0.201476446 1 10.81883145 -1.522878748 0.098898231 0.129678196 10.24679703 0.376291211 0.987367854 158.5215248 1.117179714 13.22174113 217.5212695 0.03 1.522878748 10.11711883 SVLCST(ph)PTINIPAS(ph)PFMQK ddPTM_A459_MK2206_30min_R1 1 SVLCSTPTINIPASPFMQK 19 0 Q96KB5;Q96KB5-2;E5RIE1 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 2 SVLCS(0.131)T(0.648)PT(0.221)INIPAS(1)PFMQK 88.504 0.010127 4031200 1228.2 1094.6 1034.1 860.92 995.51 1235.9 1132.9 1212.5 932.4 843.81 TRUE FALSE 1123.73514 1023.341341 963.9081732 927.2282076 955.8567287 1305.87559 1057.326308 1201.89924 1029.326317 948.3475532 1.184940201 1.07907838 1.016408141 0.977730374 1.007918168 1.377001064 1.114914363 1.267361566 1.085389331 1 9.889272069 SVNEILGLAES(ph)SPNEPK ddPTM_A459_MK2206_30min_R2 2 SVNEILGLAESSPNEPK 17 0 Q9H8G2;Q9H8G2-2 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 SVNEILGLAES(0.5)S(0.5)PNEPK;SVNEILGLAES(0.628)S(0.372)PNEPK 211.06 3.04E-09 1536500 17532.7 19443.5 18677.3 20391.4 17106.6 15329 23178.1 13174.3 15143.9 21865.9 TRUE FALSE 18875.01699 18477.96406 19299.99186 18725.35739 16434.90893 15912.35584 20134.78763 14896.22624 16461.08905 21152.41747 0.892333797 0.873562754 0.912424875 0.885258501 0.776975443 0.752271264 0.951890613 0.704232803 0.778213132 1 14.36853494 -6.175050652 7.301732132 0.81505554 0.891797327 0.108340456 0.085288791 0.526106923 38.91736001 0.024342923 0.031511463 6.68E-07 6.175050652 0.076741786 SVNEILGLAESS(ph)PNEPK ddPTM_A459_MK2206_30min_R1 2 SVNEILGLAESSPNEPK 17 0 Q9H8G2;Q9H8G2-2 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 SVNEILGLAES(0.082)S(0.918)PNEPK;SVNEILGLAES(0.027)S(0.973)PNEPK 226.22 3.60E-16 86782000 6843.5 8346.5 8469.1 6962.1 6703.7 5136.5 6160.1 6441.5 7137.1 6317.9 TRUE FALSE 6261.424388 7803.141333 7894.241088 7498.322148 6436.677434 5427.324191 5749.170969 6385.182645 7879.027085 7100.60915 0.881815103 1.098939706 1.111769557 1.05601111 0.906496513 0.76434628 0.809672923 0.899244348 1.109626923 1 12.79372708 -6.275874426 7.985314135 0.896884919 1.046970073 0.225156691 0.107429008 0.239255158 101.1665559 0.034464778 0.040446201 5.30E-07 6.275874426 0.150085153 SVNEILGLAESS(ph)PNEPK ddPTM_A459_MK2206_30min_R2 5 SVNEILGLAESSPNEPK 17 0 Q9H8G2;Q9H8G2-2 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 SVNEILGLAES(0.156)S(0.844)PNEPK;SVNEILGLAES(0.034)S(0.966)PNEPK;SVNEILGLAES(0.079)S(0.921)PNEPK;SVNEILGLAES(0.08)S(0.92)PNEPK;SVNEILGLAES(0.211)S(0.789)PNEPK 232.73 1.62E-64 0 49389.2 57479 54550 52294.8 53974.4 40965.9 60438.7 44876.8 43013.5 57643.8 TRUE FALSE 53170.47513 54624.67644 56368.66977 48022.14756 51855.09386 42524.88603 52503.02609 50742.35185 46754.73648 55762.88753 0.953510076 0.979588376 1.010863538 0.861184736 0.929921246 0.762601937 0.941540663 0.909966361 0.838456159 1 15.76701765 -5.763069987 24.99999876 0.886460142 0.981147442 0.301865915 0.061886969 48.3554278 741392.784 0.016499824 0.026013511 1.73E-06 5.763069987 0.0946873 SVNFS(ph)LTPNEIK ddPTM_A459_MK2206_30min_R1 1 SVNFSLTPNEIK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SVNFS(0.892)LT(0.108)PNEIK 145.52 0.00068097 154660000 10033 9734 10018 8787.7 8134.9 7299.3 9593.7 8590.6 8829.7 8247.2 TRUE FALSE 9179.640665 9100.314831 9338.006072 9464.530177 7810.869707 7712.580058 8953.721778 8515.49329 9747.578912 9268.925399 0.990367305 0.981809049 1.007452932 1.021103285 0.842694204 0.832089992 0.96599351 0.91871419 1.05164067 1 13.17818637 -6.213969472 24.99878085 0.92750962 0.999389995 0.19870123 0.06280708 647.3551245 340911.9865 0.019336537 0.024963264 6.11E-07 6.213969472 0.071880375 SVNFSLT(ph)PNEIK ddPTM_A459_MK2206_30min_R1 1 SVNFSLTPNEIK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SVNFS(0.003)LT(0.997)PNEIK 217.39 1.13E-07 173990000 8776.6 9014.1 8938 7428.2 7312.9 5945.3 7765.7 7327.7 6975.2 6739.8 TRUE FALSE 8030.104082 8427.280452 8331.313463 8000.321251 7021.611708 6281.917748 7247.664322 7263.634691 7700.297001 7574.777307 1.060110912 1.112544978 1.099875696 1.05617907 0.926972691 0.829320453 0.956815498 0.95892386 1.016570744 1 12.88698776 -6.155220538 3.984778031 0.94065467 1.090842251 0.642778109 0.049167051 0.151374704 4.235462211 0.015920904 0.020967464 6.99E-07 6.155220538 0.150187581 SVNFSLT(ph)PNEIK ddPTM_A459_MK2206_30min_R2 2 SVNFSLTPNEIK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.115)VNFS(0.002)LT(0.883)PNEIK;SVNFS(0.065)LT(0.935)PNEIK 159.14 0.0010771 131038000 215943 200698 185320 203861 224134 150512 225710 170281 156142 209223 TRUE FALSE 232475.7621 190731.6292 191498.4763 187204.9042 215333.373 156239.8396 196074.0059 192537.3114 169722.9489 202396.0706 1.148617962 0.942368241 0.946157085 0.924943373 1.063920719 0.771950953 0.968763896 0.951289769 0.838568399 1 17.62682176 -4.760091995 5.318833882 0.932097274 1.160505347 0.415260606 0.076384074 0.154364732 12.90746663 0.018183676 0.130837587 1.74E-05 4.760091995 0.228408072 SVPGTTS(ph)SPLVGDISPK ddPTM_A459_MK2206_30min_R2 1 SVPGTTSSPLVGDISPK 17 0 Q9UQR0;H0Y6S1;B4DRC2;Q9UQR0-2 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 1 SVPGTT(0.002)S(0.349)S(0.349)PLVGDIS(0.299)PK 190.18 7.43E-08 23039000 35374 39801 32882 31330 39077 29069 40868 34698 30956 40355 TRUE FALSE 38082.26064 37824.54022 33978.26947 28770.23878 37542.64063 30175.24116 35501.98251 39233.14774 33648.49692 39038.21965 0.975512228 0.968910482 0.870384709 0.7369762 0.961689364 0.772966632 0.909416024 1.004993263 0.861937282 1 15.25259964 -10.85093691 6.600110787 1.000003875 0.894520448 0.121770402 0.083827828 4.88E-06 4.97E-07 0.082923645 0.020111199 1.41E-11 10.85093691 -0.105483427 SVPGTTSS(ph)PLVGDISPK ddPTM_A459_MK2206_30min_R1 1 SVPGTTSSPLVGDISPK 17 0 Q9UQR0;H0Y6S1;B4DRC2;Q9UQR0-2 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 1 SVPGTTS(0.02)S(0.753)PLVGDIS(0.227)PK 233.47 9.76E-17 59663000 5658.9 7305.9 8084.4 6840 4831 3634.3 4723 5472.3 6482 5745.9 TRUE FALSE 5177.580839 6830.284582 7535.653452 7366.817985 4638.57104 3840.070925 4407.937288 5424.456258 7155.827096 6457.745471 0.801762916 1.057688726 1.166917074 1.140772429 0.718295737 0.594645754 0.682581453 0.839992267 1.108099898 1 12.65681486 -6.262779033 24.99762479 0.797403237 1.051859234 0.278083393 0.168425165 149.7216805 2793767.561 0.054487641 0.065241269 5.46E-07 6.262779033 0.254455997 SVPGTTSS(ph)PLVGDISPK ddPTM_A459_MK2206_30min_R2 1 SVPGTTSSPLVGDISPK 17 0 Q9UQR0;H0Y6S1;B4DRC2;Q9UQR0-2 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 1 SVPGT(0.008)T(0.001)S(0.028)S(0.962)PLVGDISPK 210.02 3.69E-09 22396000 37121 32855 33495 29720 32635 27040 37777 28328 24044 38301 TRUE FALSE 39963.0123 31223.46848 34611.70658 27291.78093 31353.58592 28069.02615 32816.83452 32030.56686 26135.30366 37051.24151 1.078587671 0.842710452 0.934157809 0.736595585 0.846222276 0.757573161 0.885714842 0.864493754 0.70538267 1 15.17723426 SVPGTTSSPLVGDIS(ph)PK ddPTM_A459_MK2206_30min_R1 1 SVPGTTSSPLVGDISPK 17 0 Q9UQR0;H0Y6S1;B4DRC2;Q9UQR0-2 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 1 SVPGTTSS(0.004)PLVGDIS(0.996)PK 223.5 2.76E-12 71820000 5038.6 6520.9 5836.5 5591.9 3516.3 3158.9 3684.6 4836.5 5381.9 4239.3 TRUE FALSE 4610.040611 6096.388225 5440.334641 6022.589107 3376.238325 3337.754188 3438.807057 4794.21499 5941.367764 4764.496489 0.96758191 1.279545119 1.141848809 1.264055734 0.70862437 0.700547098 0.721756657 1.00623749 1.24700853 1 12.21810804 -6.252090118 24.98058588 0.879053182 1.170034909 0.347518847 0.177330719 763.3428696 2039598.988 0.056374824 0.071757086 5.60E-07 6.252090118 0.290981727 SVPGTTSSPLVGDIS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SVPGTTSSPLVGDISPK 17 0 Q9UQR0;H0Y6S1;B4DRC2;Q9UQR0-2 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 1 SVPGTTSSPLVGDIS(1)PK;SVPGTTSS(0.001)PLVGDIS(0.999)PK 239.43 1.56E-22 21577000 101462 94448 98905 76353 87386 54810 100941 67388 65620 112785 TRUE FALSE 109230.0087 89757.84966 102202.4433 70114.71566 83954.78656 56895.83296 87687.32545 76195.84298 71327.50899 109104.8347 1.001147282 0.822675273 0.936736155 0.642636194 0.769487317 0.521478568 0.80369789 0.698372746 0.653752047 1 16.73535551 -5.754024452 24.9991764 0.710887947 0.91043519 0.327892129 0.124984388 180.1915879 607503.025 0.031737319 0.053600581 1.76E-06 5.754024452 0.199547242 SVPHEEYR ddPTM_A459_MK2206_30min_R2 2 SVPHEEYR 8 0 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;H0YN19;A0A087WUT0 A0A0A0MQW0 MYEF2 Myelin expression factor 2 0 ; 133.58 0.0042492 2100560 1869.2 1394.8 957.47 1794.6 2127.55 1912.41 564.44 641.83 1569.19 1641.98 FALSE TRUE 2012.307389 1325.53626 989.3915719 1647.975439 2044.011697 1985.188103 490.32835 725.7193847 1705.67531 1588.402327 1.26687512 0.83450914 0.622884741 1.037505052 1.286834993 1.24980181 0.308692793 0.456886377 1.07383078 1 10.63336066 -7.247784002 24.98551508 0.664592992 1.030771196 0.244657293 0.287054733 1117.898811 2045444.557 0.115862246 0.08925437 5.65E-08 7.247784002 0.366178204 SVPHLQK ddPTM_A459_MK2206_30min_R2 2 SVPHLQK 7 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 89.55 0.043298 111114000 965210 1048780 1069680 1256590 1036020 1032860 1301170 956690 1119500 1088630 FALSE TRUE 1039107.22 996699.1103 1105342.597 1153922.577 995340.6492 1072166.211 1130324.816 1081732.668 1216872.086 1053108.092 0.986705189 0.946435715 1.049600326 1.095730425 0.945145761 1.018097021 1.073322695 1.027181042 1.155505399 1 20.00622209 -7.193245208 5.092439263 1.066277611 1.006742739 0.199413805 0.056191674 0.372630964 18.75818975 0.022293139 0.016968861 6.41E-08 7.193245208 -0.059534872 SVPNT(ph)PLRPNQQSVVNSSFSELFVK ddPTM_A459_MK2206_30min_R2 1 SVPNTPLRPNQQSVVNSSFSELFVK 25 1 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 S(0.202)VPNT(0.766)PLRPNQQS(0.026)VVNS(0.002)S(0.002)FS(0.002)ELFVK 51.001 0.044323 15498000 3118.6 11762 12433 14603 14279 10007 9800.9 10430 7824.7 11338 TRUE FALSE 3357.362414 11177.91618 12847.51001 13409.88819 13718.33471 10387.8234 8514.030057 11793.23681 8505.278262 10968.04199 0.306104081 1.019135065 1.171358573 1.222632827 1.250755124 0.947099164 0.776257974 1.075236293 0.775460038 1 13.42101838 -10.37927689 20.92752758 1 0.973370302 0 0.267338871 0 0 0.264343115 0.064112623 4.18E-11 10.37927689 -0.026629697 SVPTAYRVS(ph)R ddPTM_A459_MK2206_30min_R2 3 SVPTAYRVSR 10 1 Q12872;Q12872-2 Q12872 SFSWAP "Splicing factor, suppressor of white-apricot homolog" 1 SVPT(0.001)AYRVS(0.998)R;SVPT(0.007)AY(0.003)RVS(0.99)R;SVPT(0.007)AY(0.002)RVS(0.99)R 69.352 0.042464 20805100 47323.2 43631.4 52575.3 56886.6 45022.5 56012 53597.4 39707.4 48328.9 51236.7 TRUE FALSE 50946.30058 41464.72812 54328.13426 52238.78281 43254.69043 58143.57591 46559.997 44897.29352 52532.46036 49564.85068 1.027871564 0.836575266 1.096102047 1.053948153 0.872688808 1.173080825 0.939375311 0.90582929 1.05987327 1 15.59702976 -5.265259852 24.99216344 1.008843407 0.932223422 0.100449469 0.095696204 744.6647057 4871360.777 0.024214679 0.053824087 5.43E-06 5.265259852 -0.076619985 SVPTS(ph)TVFYPSDGVATEK ddPTM_A459_MK2206_30min_R1 3 SVPTSTVFYPSDGVATEK 18 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 1 SVPT(0.008)S(0.96)T(0.033)VFYPSDGVATEK;S(0.002)VPT(0.093)S(0.531)T(0.374)VFYPSDGVATEK;SVPT(0.002)S(0.973)T(0.025)VFYPSDGVATEK 283.49 2.81E-67 10879900 4036.37 4105.5 3831.03 3407.63 3835.5 3355.07 4355.2 3618.68 3197.25 3689.25 TRUE FALSE 3693.055536 3838.231204 3570.990357 3670.086253 3682.723913 3545.031164 4064.672555 3587.042262 3529.615579 4146.302142 0.890686546 0.925699834 0.861247018 0.885146843 0.888194779 0.854986212 0.980312677 0.865118397 0.851268301 1 12.01760953 SVPTSTVFYPSDGVATEK ddPTM_A459_MK2206_30min_R1 2 SVPTSTVFYPSDGVATEK 18 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 246.53 4.37E-78 8156400 2540.68 2542.76 2322.28 1993.43 2888.1 3012.2 2579.81 2086.78 2209.62 2012.39 FALSE TRUE 2324.581824 2377.225862 2164.650104 2146.964324 2773.060861 3182.748161 2407.715582 2068.535502 2439.317906 2261.700066 1.027802872 1.051079185 0.957089818 0.949270134 1.22609576 1.407237064 1.064560071 0.914593201 1.078532889 1 11.1431919 -6.244743213 24.42691416 1.122972372 0.997421073 0.170531433 0.12771812 1228.61645 1797495.134 0.042391469 0.054564043 5.69E-07 6.244743213 -0.125551299 SVPTSTVFYPSDGVATEK ddPTM_A459_MK2206_30min_R2 1 SVPTSTVFYPSDGVATEK 18 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 216.88 7.43E-39 0 11671 12000 9369.2 13287 10537 10351 13363 9036.1 8281.6 11895 FALSE TRUE 12564.54073 11404.09745 9681.564452 12201.4096 10123.26444 10744.91456 11608.42205 10217.1493 9001.918598 11506.86712 1.091916731 0.99106884 0.841372751 1.060358955 0.879758524 0.933782796 1.008825593 0.887917553 0.782308382 1 13.49020748 -4.902029206 3.685714434 0.926222097 1.092073557 0.299735167 0.078894935 0.300953843 7.174110973 0.01963565 0.110946822 1.25E-05 4.902029206 0.16585146 SVPVNNLPERS(ph)PTDSPR ddPTM_A459_MK2206_30min_R1 2 SVPVNNLPERSPTDSPR 17 1 P49454 P49454 CENPF Centromere protein F 1 SVPVNNLPERS(0.701)PT(0.226)DS(0.073)PR;SVPVNNLPERS(0.934)PT(0.065)DSPR 251 6.44E-30 15813100 3845.6 3138.9 2835.8 2898.2 3867.5 3478.2 3034.9 2912.7 2330.8 2541.2 TRUE FALSE 3518.511526 2934.557039 2643.313797 3121.419866 3713.449285 3675.132678 2832.447358 2887.234571 2573.095001 2856.023041 1.231961884 1.027497677 0.925522574 1.09292531 1.300216851 1.28680078 0.991745276 1.010928319 0.900936359 1 11.4797919 -7.483734755 22.99543462 0.973826655 1.134145249 0.352189027 0.111544773 281.159488 165169.5777 0.052833107 0.03560787 3.28E-08 7.483734755 0.160318594 SVPVNNLPERS(ph)PTDSPR ddPTM_A459_MK2206_30min_R2 1 SVPVNNLPERSPTDSPR 17 1 P49454 P49454 CENPF Centromere protein F 1 SVPVNNLPERS(0.491)PT(0.019)DS(0.491)PR 113.95 0.0083752 5538400 13676 16590 12496 14150 13568 16021 15567 11578 9663.9 13150 TRUE FALSE 14723.04508 15766.16472 12912.6104 12993.89974 13035.25215 16630.69038 13523.0342 13091.28435 10504.44855 12720.91658 1.157388698 1.239389051 1.015069184 1.021459394 1.024710135 1.307350007 1.063055018 1.029114866 0.825761924 1 13.634915 -7.929417859 2.825788226 0.914929256 1.119915238 0.400111331 0.099890698 0.281667395 4.397693412 0.073064915 0.028342717 1.18E-08 7.929417859 0.204985982 SVQEGENPDDGVRGS(ph)PPEDYR ddPTM_A459_MK2206_30min_R1 2 SVQEGENPDDGVRGSPPEDYR 21 1 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 S(0.002)VQEGENPDDGVRGS(0.957)PPEDY(0.042)R;SVQEGENPDDGVRGS(0.998)PPEDY(0.002)R 73.722 0.0019859 26690600 2223.6 2336.5 2451.8 2348.1 2493.3 2064 1813.21 2034.58 1555.96 1500.04 TRUE FALSE 2034.471143 2184.393425 2285.378647 2528.951069 2393.986581 2180.861896 1692.254069 2016.791882 1717.70761 1685.87628 1.206773692 1.295702094 1.355602825 1.500081055 1.420025069 1.29360732 1.003783071 1.196287003 1.018881178 1 10.71928295 -7.135390877 4.524221992 1.072133319 1.359998101 0.718385478 0.089352702 0.13817998 4.468473328 0.037316275 0.028632403 7.32E-08 7.135390877 0.287864783 SVQEGENPDDGVRGS(ph)PPEDYR ddPTM_A459_MK2206_30min_R2 2 SVQEGENPDDGVRGSPPEDYR 21 1 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 SVQEGENPDDGVRGS(0.979)PPEDY(0.021)R;SVQEGENPDDGVRGS(0.938)PPEDY(0.062)R 59.618 0.01215 55396000 30480 33346 37678 52462 48692 46471 37681 36606 24199.8 35752 TRUE FALSE 32813.57224 31690.08613 38934.16571 48175.68678 46780.10742 48239.48647 32733.43944 41390.52989 26304.65486 34585.41517 0.948769071 0.916284682 1.125739435 1.392948055 1.352596382 1.394792754 0.946452118 1.196762557 0.760570742 1 15.07787615 -8.250100594 24.47537684 0.880285368 1.165061631 0.275066352 0.180984765 688.7646094 1486745.52 0.137141478 0.050778382 5.62E-09 8.250100594 0.284776262 SVS(ph)ANPK ddPTM_A459_MK2206_30min_R2 1 SVSANPK 7 0 Q7KZI7-14;E9PC69;Q7KZI7-13;E7ETY4;Q7KZI7-15;Q7KZI7-16;Q7KZI7-3;Q7KZI7-9;Q7KZI7-8;Q7KZI7-11;Q7KZI7-6;Q7KZI7;Q7KZI7-12;Q7KZI7-4;Q7KZI7-5;Q7KZI7-2;Q7KZI7-7;Q7KZI7-10 Q7KZI7-14 MARK2 Serine/threonine-protein kinase MARK2 1 SVS(1)ANPK 84.615 0.037299 5747100 32483 26284 25078 28148 40815 37414 32649 140420 78117 46158 TRUE FALSE 34969.92346 24978.77478 25914.088 25848.21836 39212.39802 38837.81599 28362.14708 158773.3761 84911.47546 44651.86824 0.783168204 0.559411639 0.580358427 0.578883244 0.878180456 0.869791512 0.635183884 3.555805891 1.901633208 1 15.44643292 -7.727744108 24.99955138 2.296540098 0.69698212 0.552878955 0.595242572 109.9703582 81590.3747 0.260368672 0.150313393 1.87E-08 7.727744108 -1.599557977 SVS(ph)CDNVSK ddPTM_A459_MK2206_30min_R2 2 SVSCDNVSK 9 0 Q96CB8;A0A087WXN4 Q96CB8 INTS12 Integrator complex subunit 12 1 S(0.053)VS(0.947)CDNVSK;S(0.129)VS(0.871)CDNVSK 121.68 0.0061852 102179000 306260 344050 322690 372300 348330 296030 385370 311750 251840 322890 TRUE FALSE 329707.5011 326964.9773 333448.3235 341881.8991 334652.814 307295.6291 334770.4561 352496.7954 273744.588 312354.1257 1.055556735 1.04677656 1.067532957 1.094533002 1.071389127 0.983805251 1.071765757 1.128516534 0.876391779 1 18.25282306 -8.262421337 24.99903304 0.93819589 1.063181014 0.566289714 0.044360952 64.26619659 1635987.558 0.035180822 0.011013582 5.46E-09 8.262421337 0.124985124 SVS(ph)EAALAQPQGPLGTDSLK ddPTM_A459_MK2206_30min_R2 1 SVSEAALAQPQGPLGTDSLK 20 0 Q05469;M0R201;M0QY29;Q05469-2 Q05469 LIPE Hormone-sensitive lipase 1 S(0.032)VS(0.968)EAALAQPQGPLGTDSLK 105.91 0.00048494 1953600 11717 13897 10455 15913 15166 11113 15123 13660 13615 14441 TRUE FALSE 12614.06253 13206.89519 10803.56448 14612.857 14570.50664 11535.913 13137.33193 15445.4089 14799.20809 13969.79135 0.902952822 0.945389581 0.773351885 1.046032588 1.04300102 0.825775612 0.940410032 1.105629176 1.059372164 1 13.77002285 -7.69455226 6.991424029 1.061452364 0.924838112 0.341174168 0.082577545 0.241635627 20.49024907 0.040625522 0.02311465 2.02E-08 7.69455226 -0.136614252 SVS(ph)EESANSLVSVGVEAK ddPTM_A459_MK2206_30min_R1 2 SVSEESANSLVSVGVEAK 18 0 Q8NEZ4;Q8NEZ4-3;C9J4Z5;H0YMU7 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 SVS(0.969)EES(0.026)ANS(0.005)LVSVGVEAK;S(0.002)VS(0.546)EES(0.412)ANS(0.04)LVSVGVEAK 216.9 3.47E-14 6695800 1935.92 2162.53 2480.37 2299.16 2542.32 1738.27 2312.72 2274.75 2098.61 1799.89 TRUE FALSE 1771.259838 2021.748904 2312.009395 2476.241702 2441.054011 1836.689345 2158.442669 2254.862101 2316.768019 2022.873962 0.875615521 0.999443832 1.142932995 1.224120607 1.206725707 0.907960348 1.067017871 1.114682448 1.145285403 1 10.98219072 -4.950456211 3.05812647 1.104659346 0.873616106 0.385340511 0.089160621 0.30946435 5.317134416 0.024716266 0.143706405 1.12E-05 4.950456211 -0.23104324 SVS(ph)EINSDDELSGK ddPTM_A459_MK2206_30min_R1 1 SVSEINSDDELSGK 14 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 S(0.004)VS(0.995)EINSDDELSGK 214.58 1.08E-06 51576000 6954.9 7616.6 7442 5946.6 6216 5462.5 6463.2 6464.7 6795 5915.9 TRUE FALSE 6363.349233 7120.757956 6936.857775 6404.608162 5968.403557 5771.782029 6032.051721 6408.179809 7501.364566 6648.806355 0.957066411 1.070982907 1.043323779 0.963271875 0.897665421 0.868092966 0.907238292 0.963809061 1.128227259 1 12.69887964 -5.834531482 5.701406791 0.950122594 1.028322029 0.122957176 0.072736688 0.358635768 20.36664706 0.021788151 0.033044573 1.46E-06 5.834531482 0.078199435 SVS(ph)EINSDDELSGK ddPTM_A459_MK2206_30min_R2 1 SVSEINSDDELSGK 14 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 S(0.055)VS(0.83)EINS(0.114)DDELSGK 253.79 7.65E-28 58184000 33489 41602 45506 40222 33770 29040 43488 31407 28953 37031 TRUE FALSE 36052.94359 39536.10517 47023.14733 36935.73394 32444.02012 30145.13755 37777.97336 35512.00274 31471.2796 35822.6815 1.006427829 1.103661242 1.312664082 1.031071165 0.905683739 0.8415098 1.05458251 0.991327317 0.87852942 1 15.12858571 -5.994984931 24.999613 0.947230575 1.142971357 0.481342714 0.091028284 121.2591775 604454.0754 0.026450246 0.039082262 1.01E-06 5.994984931 0.195740781 SVS(ph)ENSLVAMDFSGQTGR ddPTM_A459_MK2206_30min_R2 2 SVSENSLVAMDFSGQTGR 18 0 A0A2R8YCL1;Q13322-3;Q13322-2;Q13322-4;Q13322 A0A2R8YCL1 GRB10 Growth factor receptor-bound protein 10 1 S(0.052)VS(0.814)ENS(0.133)LVAMDFSGQTGR;S(0.005)VS(0.98)ENS(0.015)LVAMDFSGQTGR 95.429 0.0040034 14367400 14307.3 18515.4 19725.1 21941 21996.3 29601 38809 31634 40117 42892 TRUE FALSE 15402.67789 17595.95216 20382.72499 20148.35011 21132.61474 30727.4868 33713.33168 35768.67242 43606.30415 41492.43755 0.371216511 0.424076126 0.491239517 0.4855909 0.509312443 0.740556318 0.812517501 0.862052811 1.050945828 1 15.34056079 -7.119044422 0.736297184 1.027571895 0.4049437 0.964008274 0.044794421 0.116636671 0.128775671 0.036288765 0.025760592 7.60E-08 7.119044422 -0.622628194 down SVS(ph)GSPESDELQELR ddPTM_A459_MK2206_30min_R2 1 SVSGSPESDELQELR 15 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 S(0.007)VS(0.967)GS(0.026)PESDELQELR 241.3 3.49E-20 3981900 8860.8 8439.9 7861.5 9652.8 9734.2 11795 9215.8 7654.2 7853.2 10088 TRUE FALSE 9539.189661 8020.786839 8123.598486 8864.135362 9351.986398 12243.86699 8005.75439 8654.630221 8536.257141 9758.829386 0.97749323 0.821900509 0.832435753 0.908319534 0.958310267 1.254645051 0.820360114 0.886851269 0.874721424 1 13.25249239 -4.452681366 21.49194688 0.927439623 2.592346792 0.014078046 0.122353528 28921778.27 92430527.26 0.032042753 2287138929 3.53E-05 4.452681366 1.664907169 SVS(ph)HPGSCSSER ddPTM_A459_MK2206_30min_R2 1 SVSHPGSCSSER 12 0 Q9HB20;H7C0Q0 Q9HB20 PLEKHA3 Pleckstrin homology domain-containing family A member 3 1 S(0.067)VS(0.931)HPGSCS(0.001)S(0.001)ER 82.925 0.023422 6289800 18600 33240 27419 44811 42483 42127 30337 22105 33124 29702 TRUE FALSE 20024.0303 31589.34994 28333.13578 41149.79796 40814.90396 43730.1725 26353.71546 24994.1994 36005.06565 28732.82617 0.696904307 1.099416735 0.986089416 1.432152817 1.420497368 1.521958621 0.917198862 0.869883082 1.253098649 1 14.81041228 -3.652641668 11.64373374 1.134411013 1.094477816 0 0.26165511 0 0 0.063735559 0 0.000222515 3.652641668 -0.039933197 SVS(ph)KESVASMGADSGDDFASDGSSSR ddPTM_A459_MK2206_30min_R2 1 SVSKESVASMGADSGDDFASDGSSSR 26 1 Q5T165;Q92805 Q5T165 GOLGA1 Golgin subfamily A member 1 1 S(0.231)VS(0.701)KES(0.067)VASMGADSGDDFASDGSSSR 81.297 7.27E-05 15467000 22143 18822 25096 19171 19836 16219 21265 15901 17359 19348 TRUE FALSE 23838.28511 17887.32685 25932.68811 17604.66798 19057.13897 16836.22541 18472.87996 17979.3153 18868.85444 18716.67634 1.273638795 0.955689275 1.385539165 0.940587295 1.018190336 0.899530723 0.986974376 0.960604061 1.008130615 1 14.19203665 -5.803575348 24.99999901 0.971139506 1.180029899 0.496641625 0.105907322 114.4926973 67929.9982 0.027646062 0.04100613 1.57E-06 5.803575348 0.208890393 SVS(ph)PAVHR ddPTM_A459_MK2206_30min_R1 1 SVSPAVHR 8 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 S(0.023)VS(0.977)PAVHR 72.325 0.042067 0 1799 1807.2 1716.9 1621.2 2257.5 2099.9 1955.2 1937.3 1064.8 1291.6 TRUE FALSE 1645.985603 1689.550952 1600.361612 1746.065105 2167.578995 2218.794523 1824.772175 1920.36239 1175.48977 1451.613159 1.133900993 1.163912673 1.102471138 1.202844638 1.493220822 1.528502624 1.257065055 1.32291608 0.809781699 1 10.50344132 -8.256662419 24.93147171 0.904890832 1.278750642 0.52372542 0.141382905 309.569278 1615698.764 0.115632973 0.040556917 5.54E-09 8.256662419 0.373859809 SVS(ph)PLLSTHVLGK ddPTM_A459_MK2206_30min_R1 1 SVSPLLSTHVLGK 13 0 Q96H12;X6RL08;X6R907;Q96H12-2 Q96H12 MSANTD3 Myb/SANT-like DNA-binding domain-containing protein 3 1 S(0.007)VS(0.99)PLLS(0.002)THVLGK 118.52 0.0022531 21616000 7001.3 4493.3 5981.6 4582.4 8008.7 7604.1 7696.4 6652.6 3676.8 4458.6 TRUE FALSE 6405.80267 4200.785353 5575.585658 4935.337242 7689.69652 8034.637571 7182.987199 6594.43702 4059.016518 5010.965029 1.27835709 0.838318633 1.112677024 0.984907541 1.534573975 1.603411224 1.433453867 1.316001405 0.81002691 1 12.29087275 -6.239442765 24.59773873 1.322263449 1.042412582 0.160669379 0.246643565 1045.537464 1169172.835 0.074789051 0.09646011 5.76E-07 6.239442765 -0.279850867 SVS(ph)PLLSTHVLGK ddPTM_A459_MK2206_30min_R2 1 SVSPLLSTHVLGK 13 0 Q96H12;X6RL08;X6R907;Q96H12-2 Q96H12 MSANTD3 Myb/SANT-like DNA-binding domain-containing protein 3 1 SVS(0.999)PLLSTHVLGK 147.73 0.00056539 5258700 20175 43927 31741 46070 41398 46896 45742 32098 42514 40335 TRUE FALSE 21719.61351 41745.64906 32799.2291 42305.93363 39772.50651 48680.66014 39736.02045 36293.31881 46211.79087 39018.87225 0.556643805 1.069883537 0.840599105 1.08424286 1.019314609 1.247618328 1.018379521 0.930147816 1.184344606 1 15.25188446 -4.497987613 2.270900585 1.046033317 5.29E-17 0.61915991 0.112885085 1.465990226 3.904557668 0.029352705 4.201198631 3.18E-05 4.497987613 -1.046033317 SVS(ph)PLVWCR ddPTM_A459_MK2206_30min_R1 2 SVSPLVWCR 9 0 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 SVS(1)PLVWCR;SVS(1)PLVWCR 137.46 0.0025514 25165000 3799.2 3950.3 3822.8 3723.5 4295.8 4221.2 3826.1 3636 3335.9 3046.2 TRUE FALSE 3476.05809 3693.134752 3563.318987 4010.284615 4124.689189 4460.200696 3570.86785 3604.210835 3682.678743 3423.586254 1.01532657 1.07873279 1.040814726 1.171369528 1.204786117 1.302786133 1.043019683 1.052758882 1.07567868 1 11.74129264 SVS(ph)PLVWCR ddPTM_A459_MK2206_30min_R2 2 SVSPLVWCR 9 0 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 S(0.029)VS(0.971)PLVWCR;S(0.008)VS(0.992)PLVWCR 119.22 0.0069649 9221200 57682 57269 44670 67166 60089 62363 57510 48427 52631 59718 TRUE FALSE 62098.17827 54425.10474 46159.2755 61678.32295 57729.60394 64736.26766 49958.86792 54756.57517 57208.74924 57769.40655 1.074931906 0.942109466 0.799026306 1.067664126 0.999311009 1.120597762 0.864798012 0.947847285 0.99029491 1 15.81801805 -4.752440044 24.522391 0.968568473 1.074932169 0.114777808 0.087166646 659.8722001 1797924.143 0.02223767 0.26099921 1.77E-05 4.752440044 0.106363696 SVS(ph)PQNSDSSGFADVNGWHLR ddPTM_A459_MK2206_30min_R2 1 SVSPQNSDSSGFADVNGWHLR 21 0 S4R3E2;Q9UKB3 S4R3E2 DNAJC12 DnaJ homolog subfamily C member 12 1 S(0.432)VS(0.568)PQNSDSSGFADVNGWHLR 130.69 3.44E-05 9589200 10798 8974.3 10274 10526 9649.4 11911 13422 9256.5 7729.6 10802 TRUE FALSE 11624.70318 8528.649312 10616.53003 9665.992129 9270.516072 12364.28145 11659.67528 10466.35633 8401.906636 10449.53162 1.112461649 0.816175272 1.015981425 0.925016783 0.887170488 1.183237861 1.115808411 1.001610092 0.804046242 1 13.35115066 -4.436360547 21.49158023 0.979547058 10.73084712 0.116014379 0.114580767 857.7173709 213996.4273 0.028751323 1790.092985 3.66E-05 4.436360547 9.751300058 SVS(ph)PQTLEAYIR ddPTM_A459_MK2206_30min_R2 1 SVSPQTLEAYIR 12 0 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0 A0A2R8Y7K2 SPAST Spastin 1 S(0.051)VS(0.723)PQT(0.226)LEAYIR 101.75 0.012241 1127900 5318.5 5721.8 5770.1 6667.8 4843.4 5735.4 4666.9 5605.2 5995.6 6138.7 TRUE FALSE 5725.688449 5437.663732 5962.472254 6123.019411 4653.22378 5953.664666 4054.130424 6337.818886 6517.08645 5938.394722 0.964181183 0.915679066 1.004054552 1.03109 0.783582769 1.002571393 0.682698038 1.067261303 1.097449185 1 12.53585728 SVS(ph)PSPVPLLFQPDQNAPPIR ddPTM_A459_MK2206_30min_R1 2 SVSPSPVPLLFQPDQNAPPIR 21 0 Q02241-2;Q02241-3 Q02241-2 KIF23 Kinesin-like protein KIF23 1 S(0.068)VS(0.928)PS(0.004)PVPLLFQPDQNAPPIR;S(0.005)VS(0.995)PSPVPLLFQPDQNAPPIR 292.65 6.93E-87 147145000 10288.5 11004.9 9755.7 9711.9 10817.7 10202.3 9478 8366.2 7693.8 6199.2 TRUE FALSE 9413.409048 10288.47901 9093.510265 10459.91222 10386.8081 10779.94541 8845.739914 8293.055195 8493.598043 6967.203698 1.35110289 1.476701336 1.305187943 1.501307077 1.490814472 1.547241315 1.269625563 1.190298943 1.219082779 1 12.76636403 -7.889960025 1.206629108 1.066435939 1.443570215 0.726343165 0.085811772 0.256778265 0.673554242 0.078077551 0.028446981 1.29E-08 7.889960025 0.377134276 SVS(ph)PSPVPLLFQPDQNAPPIR ddPTM_A459_MK2206_30min_R2 5 SVSPSPVPLLFQPDQNAPPIR 21 0 Q02241-2;Q02241-3 Q02241-2 KIF23 Kinesin-like protein KIF23 1 S(0.023)VS(0.695)PS(0.282)PVPLLFQPDQNAPPIR;S(0.045)VS(0.704)PS(0.252)PVPLLFQPDQNAPPIR;S(0.022)VS(0.635)PS(0.343)PVPLLFQPDQNAPPIR;S(0.066)VS(0.771)PS(0.163)PVPLLFQPDQNAPPIR;S(0.194)VS(0.766)PS(0.04)PVPLLFQPDQNAPPIR 121.35 4.85E-05 262910100 91352 110660 93746 113935 109328.1 121385 140667 110337 92169 101433 TRUE FALSE 98345.97936 105164.7853 96871.44485 104626.146 105035.3295 126004.3912 122197.2539 124758.4247 100185.693 98123.24952 1.002269899 1.071762155 0.987242527 1.066272739 1.070442836 1.284144093 1.245344549 1.271446119 1.021018907 1 16.58230739 -6.591868957 7.447521142 1.186270434 1.035995958 0.299395518 0.093843494 0.250352943 22.8972717 0.030331005 0.030333621 2.56E-07 6.591868957 -0.150274475 SVS(ph)PSPVPLSSNYIAQISNGQQLMSQPQLHR ddPTM_A459_MK2206_30min_R2 1 SVSPSPVPLSSNYIAQISNGQQLMSQPQLHR 31 0 Q02241;H7BYN4 Q02241 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 S(0.209)VS(0.689)PS(0.061)PVPLS(0.018)S(0.018)NY(0.006)IAQISNGQQLMSQPQLHR 49.087 0.035085 3624800 4770.2 10803 7762.9 12327 12480 11584 9712.9 8253.4 9686.9 11819 TRUE FALSE 5135.41018 10266.53873 8021.711211 11319.84467 11989.97249 12024.83724 8437.584563 9332.147718 10529.44905 11433.347 0.449160703 0.897946921 0.701606556 0.990072694 1.048684387 1.051733778 0.737980275 0.816221857 0.920941965 1 13.48096018 -4.503210473 1.673065136 0.912548026 4.56E-31 0.567369468 0.11852195 1.820167524 2.784313393 0.034571196 3.352527986 3.14E-05 4.503210473 -0.912548026 SVS(ph)PTFLNPSDENLK ddPTM_A459_MK2206_30min_R1 2 SVSPTFLNPSDENLK 15 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 S(0.183)VS(0.747)PT(0.071)FLNPSDENLK;S(0.027)VS(0.951)PT(0.022)FLNPSDENLK 271.43 5.18E-45 69597300 9772.75 10407.8 10007.2 8906.91 9497.5 7533.61 10101.3 9639.51 8467.75 7968.01 TRUE FALSE 8941.526294 9730.250328 9327.939146 9592.921751 9119.194464 7960.156488 9427.460708 9555.23278 9348.002915 8955.147234 0.998478982 1.08655392 1.041628786 1.071218764 1.018318764 0.888891749 1.052742123 1.067010126 1.04386926 1 13.12850144 -4.455325841 22.11738146 1.030457173 0.000316839 0.03087546 0.052973133 2197.962475 576694.0037 0.013557101 22192.37291 3.50E-05 4.455325841 -1.030140334 SVS(ph)PTFLNPSDENLK ddPTM_A459_MK2206_30min_R2 4 SVSPTFLNPSDENLK 15 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 S(0.025)VS(0.499)PT(0.476)FLNPSDENLK;S(0.009)VS(0.757)PT(0.234)FLNPSDENLK;SVS(1)PTFLNPSDENLK;S(0.01)VS(0.99)PTFLNPSDENLK 290.63 3.17E-67 140969000 147912 168608 157196 167360 181191 140579 207975 154620 146458 175479 TRUE FALSE 159236.2564 160235.1719 162436.8362 153686.1526 174076.5309 145928.8324 180667.6327 174829.3649 159196.6521 169753.1346 0.938046044 0.943930563 0.956900363 0.905350897 1.025468727 0.859653241 1.064296298 1.029903603 0.937812739 1 17.37307869 -7.276704265 24.97291993 1.01049512 0.941804543 0.325646154 0.048977617 987.9993652 1616332.024 0.0195088 0.013209038 5.29E-08 7.276704265 -0.068690577 SVS(ph)PTTEMVSNESVDYR ddPTM_A459_MK2206_30min_R1 2 SVSPTTEMVSNESVDYR 17 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 1 S(0.071)VS(0.927)PT(0.003)TEMVSNESVDYR;S(0.015)VS(0.984)PT(0.002)TEMVSNESVDYR 246.49 2.48E-30 45359000 6151 6015.9 4404.2 4275.7 7088.1 6071.4 7175.2 5733.3 7191.8 6372.7 TRUE FALSE 5627.82515 5624.263817 4105.255175 4605.015155 6805.765968 6415.157421 6696.5555 5683.174363 7939.413346 7162.198187 0.785767861 0.785270621 0.573183688 0.642961146 0.950234242 0.89569672 0.934986065 0.793495825 1.108516288 1 12.80618673 -6.266559883 24.79359385 0.933648311 0.694286015 0.623169845 0.095020226 268.4011909 1299603.077 0.029453277 0.034414112 5.41E-07 6.266559883 -0.239362296 SVS(ph)PTTEMVSNESVDYR ddPTM_A459_MK2206_30min_R2 5 SVSPTTEMVSNESVDYR 17 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 1 S(0.018)VS(0.947)PT(0.031)T(0.003)EMVS(0.002)NESVDYR;S(0.002)VS(0.981)PT(0.013)T(0.004)EMVSNESVDYR;S(0.151)VS(0.842)PT(0.007)TEMVSNESVDYR;S(0.001)VS(0.792)PT(0.094)T(0.094)EMVS(0.019)NESVDYR;SVS(0.958)PT(0.035)T(0.007)EMVSNESVDYR 217.65 9.12E-12 36750000 87567 73374 67528.8 76494 70911.7 77244.5 96379 58197 78239.6 73398 TRUE FALSE 94271.19685 69730.35386 69780.17649 70244.19551 68127.35036 80184.09358 83724.32153 65803.54772 85044.73898 71003.02927 1.327706688 0.982075759 0.982777456 0.989312657 0.959499208 1.129305248 1.179165486 0.92677099 1.197762122 1 16.11559296 -6.793847836 24.99304239 1.087809213 1.037682081 0.019697963 0.124287709 819.9546813 632334.0458 0.043354328 0.038237825 1.61E-07 6.793847836 -0.050127132 SVS(ph)PYSR ddPTM_A459_MK2206_30min_R2 2 SVSPYSR 7 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 SVS(1)PYSR;S(0.001)VS(0.999)PYSR 146.79 0.003076 18772600 84588 113424 88066 113970 98423 98472 93144 82909 75522 88399 TRUE FALSE 91064.12232 107791.5291 91002.07649 104658.2864 94558.41848 102219.421 80914.08091 93745.49097 82090.76705 85514.54787 1.064896261 1.260505163 1.064170703 1.223865284 1.10575827 1.195345395 0.946202523 1.096251963 0.959962592 1 16.38388225 -7.256271917 24.99746001 1.008625265 1.154451031 0.52249312 0.070920549 333.8230524 1614864.696 0.025228205 0.018929844 5.54E-08 7.256271917 0.145825766 SVS(ph)SDSLGPPRPAPAR ddPTM_A459_MK2206_30min_R1 1 SVSSDSLGPPRPAPAR 16 1 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 SVS(0.77)S(0.23)DSLGPPRPAPAR 144.88 0.0018422 5058900 1261.8 1177.3 1275.6 1476.5 1324.1 925.08 1370.5 1097.3 1197.3 1106.2 TRUE FALSE 1154.477284 1100.657556 1189.015826 1590.220286 1271.358293 977.4572302 1279.076446 1087.706422 1321.76362 1243.244407 0.928600424 0.885310683 0.956381399 1.279089032 1.022613322 0.786214862 1.028821395 0.874893477 1.063156698 1 10.27989423 SVS(ph)SENPTYPSAPLKPVTVPPR ddPTM_A459_MK2206_30min_R2 1 SVSSENPTYPSAPLKPVTVPPR 22 1 A0A0U1RQE4;Q5HYK7-2;Q5HYK7;Q5HYK7-3;A0A0U1RQN2;A0A494C1M0 A0A0U1RQE4;A0A494C1M0 SH3D19 SH3 domain-containing protein 19 1 S(0.049)VS(0.756)S(0.195)ENPTYPSAPLKPVTVPPR 78.645 0.014654 0 5246.1 5917.2 6049.6 5981.5 5151.1 4363.8 4731.4 4497.5 4182.2 6334.5 TRUE FALSE 5647.74545 5623.360452 6251.290645 5492.792316 4948.841932 4529.867467 4110.161497 5085.338692 4545.960196 6127.805784 0.92165869 0.917679289 1.020151562 0.896371803 0.80760424 0.739231566 0.670739518 0.829879221 0.741857748 1 12.58115486 -6.204031773 2.988584237 0.778152555 0.950218561 0.39173583 0.085937149 0.236656992 4.194219827 0.026056109 0.033909195 6.25E-07 6.204031773 0.172066006 SVS(ph)SNVASVSPIPAGSK ddPTM_A459_MK2206_30min_R2 1 SVSSNVASVSPIPAGSK 17 0 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 S(0.002)VS(0.972)S(0.026)NVASVSPIPAGSK 154.75 0.00029353 0 10402 10618 11379 9172.6 9549.9 9118.9 11931 8767.4 9168.6 16380 TRUE FALSE 11198.38512 10090.72556 11758.37018 8423.169238 9174.922942 9465.926129 10364.44537 9913.329283 9966.068255 15845.52194 0.706722389 0.636818755 0.742062661 0.531580422 0.579023081 0.597388093 0.654093024 0.625623398 0.628951718 1 13.95178756 -10.83636852 3.883488941 1.000794755 0.631570002 0.788708809 0.056886783 12986807.07 7248032.263 83201.06845 0.014200742 1.46E-11 10.83636852 -0.369224753 SVS(ph)SSPWLPQDGFDPSDYAEPMDAVVKPR ddPTM_A459_MK2206_30min_R2 1 SVSSSPWLPQDGFDPSDYAEPMDAVVKPR 29 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 S(0.112)VS(0.542)S(0.157)S(0.188)PWLPQDGFDPSDYAEPMDAVVKPR 99.325 5.82E-08 4952500 22317 26788 28656 27061 22988 20136 21679 12629 16771 15844 TRUE FALSE 24025.60668 25457.74687 29611.37674 24850.02974 22085.37561 20902.28959 18832.52126 14279.65366 18229.71126 15327.01158 1.567533668 1.660972639 1.931973274 1.621322566 1.440944668 1.36375506 1.228714493 0.931665876 1.189384582 1 13.90378881 -6.882682517 1.042328007 1.04050913 1.719386229 0.845085563 0.11700813 0.193641398 0.443300024 0.071687322 0.057619339 1.31E-07 6.882682517 0.678877099 SVS(ph)SSSYR ddPTM_A459_MK2206_30min_R2 1 SVSSSSYR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.001)VS(0.315)S(0.055)S(0.315)S(0.315)YR 80.455 0.046106 48050000 430660 386230 328850 389310 337370 439250 411030 309510 298080 446320 TRUE FALSE 463631.6607 367050.3798 339813.6949 357502.1277 324123.1587 455965.9665 357061.2673 349964.0197 324006.4596 431756.615 1.073826421 0.850132614 0.787049192 0.828017719 0.750708032 1.056071756 0.826996634 0.810558559 0.750437743 1 18.71985876 -4.761954036 7.122865914 0.844684392 1.078358876 0.325979774 0.095707554 0.12367505 38.34881484 0.023380914 0.140095674 1.73E-05 4.761954036 0.233674484 SVS(ph)TMNLSK ddPTM_A459_MK2206_30min_R1 2 SVSTMNLSK 9 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 S(0.078)VS(0.461)T(0.461)MNLS(0.001)K;S(0.001)VS(0.499)T(0.499)MNLS(0.002)K 155.33 0.00082205 48651000 6396.6 5117.3 5079.8 5767.5 6181.6 5655.5 6752 5590.1 5407.2 4661.9 TRUE FALSE 5852.53558 4784.16284 4734.997329 6211.713849 5935.373782 5975.709523 6301.5864 5541.226345 5969.29779 5239.451368 1.117013055 0.913103778 0.903720065 1.185565704 1.132823528 1.140521994 1.20271875 1.057596675 1.139298253 1 12.35520004 -5.764021398 24.99991678 1.12955149 0.971461442 0.420926227 0.077367957 57.12740293 553134.9032 0.020937457 0.032748798 1.72E-06 5.764021398 -0.158090049 SVS(ph)TMNLSK ddPTM_A459_MK2206_30min_R2 1 SVSTMNLSK 9 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 S(0.139)VS(0.824)T(0.037)MNLSK 110.93 0.010566 16495000 72599 83667 86086 78625 69387 63744 79001 53409 55452 60771 TRUE FALSE 78157.23526 79512.21844 88956.06427 72201.08599 66662.51774 66169.82259 68628.0738 60389.73968 60275.11473 58788.04725 1.329474934 1.352523551 1.513165829 1.228159284 1.133946795 1.125565922 1.167381415 1.027245206 1.025295405 1 15.84323524 -6.08778433 2.599765436 1.084740627 1.393282717 0.806114713 0.069521122 0.125684028 1.665826091 0.022588455 0.032058376 8.17E-07 6.08778433 0.30854209 SVS(ph)TPPR ddPTM_A459_MK2206_30min_R1 1 SVSTPPR 7 0 Q9UQ84;Q9UQ84-4 Q9UQ84 EXO1 Exonuclease 1 1 S(0.001)VS(0.5)T(0.5)PPR 101.6 0.016767 0 11146 10328 9298.8 7559.6 9598.2 8654.8 9720.8 7978 5953 6697.9 TRUE FALSE 10197.97417 9655.645323 8667.623364 8141.841702 9215.883369 9144.827297 9072.343169 7908.249187 6571.835653 7527.686419 1.354728877 1.282684318 1.151432576 1.081586194 1.224265047 1.21482575 1.205196745 1.050555077 0.873021973 1 12.87799082 -7.91624243 3.066207143 0.938592489 1.21235819 0.703603369 0.074187783 0.152225225 2.803776263 0.053947139 0.021776579 1.21E-08 7.91624243 0.273765701 SVS(ph)TPPR ddPTM_A459_MK2206_30min_R2 2 SVSTPPR 7 0 Q9UQ84;Q9UQ84-4 Q9UQ84 EXO1 Exonuclease 1 1 S(0.006)VS(0.497)T(0.497)PPR;S(0.009)VS(0.496)T(0.496)PPR 104.37 0.018036 33427000 441000 450350 371880 463410 467580 487410 495830 384810 416830 499750 TRUE FALSE 474763.2991 427986.2739 384278.2936 425547.9206 449220.4598 505958.7291 430726.9254 435105.9883 453085.1199 483443.1984 0.982045669 0.88528761 0.794877857 0.880243888 0.929210425 1.04657327 0.890956635 0.900014706 0.937204456 1 18.88298687 -6.333219299 4.702925419 0.948523683 0.879091261 0.220914625 0.05994271 0.359140368 15.167756 0.019849494 0.02283562 4.64E-07 6.333219299 -0.069432422 SVS(ph)TPSEAGSQDSGDGAVGSR ddPTM_A459_MK2206_30min_R1 2 SVSTPSEAGSQDSGDGAVGSR 21 0 E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E9PGG1;E7ETL8;E7ESD3;E7EMU4;Q13409;Q13409-7;Q13409-5;E7ET01;E7ERR6;E7EUM4;E7ERH4 E7EQL5 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 S(0.002)VS(0.498)T(0.498)PS(0.002)EAGSQDSGDGAVGSR;SVS(0.499)T(0.499)PS(0.001)EAGSQDSGDGAVGSR 340.33 6.89E-282 4827800 3337.25 3003.13 2606.02 2601.1 3419.14 2784.28 3323.6 2839.23 2533.92 2271.03 TRUE FALSE 3053.399363 2807.625691 2429.130623 2801.437173 3282.948414 2941.923527 3101.888708 2814.406911 2797.330052 2552.382342 1.196293875 1.100002004 0.951711107 1.097577399 1.286229089 1.152618665 1.215291556 1.102658824 1.095968267 1 11.31762874 -3.697495884 3.325592644 1.11987182 44.53082293 0.065165054 0.090751392 4811.897863 97.62655342 0.024505878 1588725.363 0.00020068 3.697495884 43.41095111 SVS(ph)TPSEAGSQDSGDGAVGSR ddPTM_A459_MK2206_30min_R2 1 SVSTPSEAGSQDSGDGAVGSR 21 0 E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E9PGG1;E7ETL8;E7ESD3;E7EMU4;Q13409;Q13409-7;Q13409-5;E7ET01;E7ERR6;E7EUM4;E7ERH4 E7EQL5 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 SVS(0.497)T(0.497)PS(0.006)EAGSQDSGDGAVGSR 216.35 2.70E-20 3903200 9625.1 8496.3 9301.1 7767.5 8184.6 10606 7670.4 5646.6 8051.2 7310.7 TRUE FALSE 10362.00506 8074.386097 9611.194032 7132.870403 7863.23148 11009.61876 6663.267266 6384.630008 8751.478823 7072.152458 1.465184061 1.141715502 1.359019632 1.008585497 1.11185831 1.556756423 0.94218377 0.902784555 1.237456188 1 12.78793366 -1.522878745 0.185918917 0.995700447 2.598059739 0.218656714 0.18945274 94.25345868 1.085761361 0.413163474 43.05429489 0.03 1.522878745 1.602359291 SVS(ph)TTNIAGHFNDESPLGLR ddPTM_A459_MK2206_30min_R1 3 SVSTTNIAGHFNDESPLGLR 20 0 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.036)VS(0.757)T(0.19)T(0.017)NIAGHFNDESPLGLR;S(0.099)VS(0.762)T(0.138)T(0.001)NIAGHFNDESPLGLR;S(0.186)VS(0.393)T(0.393)T(0.026)NIAGHFNDES(0.002)PLGLR 210.16 5.30E-17 74105400 4363.3 4111.8 4253.3 3818.6 4415.3 4487 4820.6 3328.81 3629.4 3191.98 TRUE FALSE 3992.178422 3844.121073 3964.597846 4112.709234 4239.429251 4741.050062 4499.02657 3299.706565 4006.689118 3587.426581 1.112825122 1.071553936 1.105136999 1.146423248 1.181746624 1.321574102 1.254109727 0.919797657 1.116869998 1 11.80873359 -10.63086115 7.046156193 0.999999928 1.137954545 0.139795461 0.101662254 1.24E-07 1.59E-08 0.107252791 0.026012609 2.34E-11 10.63086115 0.137954617 SVS(ph)TTNIAGHFNDESPLGLR ddPTM_A459_MK2206_30min_R2 4 SVSTTNIAGHFNDESPLGLR 20 0 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.167)VS(0.647)T(0.151)T(0.036)NIAGHFNDESPLGLR;S(0.168)VS(0.632)T(0.168)T(0.032)NIAGHFNDESPLGLR;S(0.187)VS(0.6)T(0.187)T(0.026)NIAGHFNDESPLGLR;S(0.183)VS(0.548)T(0.183)T(0.085)NIAGHFNDESPLGLR 128.33 0.00012673 53655500 38676.4 56089.6 42614.3 62466 48187.9 55577 52603.4 42507.3 50722.5 45393.4 TRUE FALSE 41637.49492 53304.27203 44035.03949 57362.32798 46295.80092 57692.02168 45696.51039 48063.15006 55134.25136 43912.21708 0.948198422 1.213882504 1.002796999 1.306295418 1.054280654 1.313803436 1.040633187 1.094527976 1.255556085 1 15.42233476 -4.748771705 24.76351496 1.145552073 0.948197899 0.201214812 0.115941024 822.2068941 1607189.171 0.026415083 0.455418852 1.78E-05 4.748771705 -0.197354174 SVS(ph)VDESRPELIFR ddPTM_A459_MK2206_30min_R2 2 SVSVDESRPELIFR 14 1 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 S(0.178)VS(0.81)VDES(0.012)RPELIFR;S(0.003)VS(0.994)VDES(0.003)RPELIFR 85.734 0.013322 25509000 52139 57589 56847 61134 58444 51580 57481 48308 37671 47837 TRUE FALSE 56130.80193 54729.214 58742.25061 56139.15664 56149.1949 53542.91304 49933.67565 54622.02147 40947.55549 46276.08261 1.212954917 1.182667394 1.269386847 1.213135457 1.213352379 1.1570321 1.079038519 1.180351023 0.884853539 1 15.49797912 -7.792366771 0.91892712 0.961235584 1.218802087 0.703280648 0.060887446 0.306766073 0.474229699 0.052007869 0.021581118 1.61E-08 7.792366771 0.257566503 SVS(ph)VDIR ddPTM_A459_MK2206_30min_R2 1 SVSVDIR 7 0 Q6UB99 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 S(0.004)VS(0.996)VDIR 101.25 0.020043 1425700 25555 27809 27079 30408 29959 23177 26505 19851 19633 27054 TRUE FALSE 27511.51045 26428.0455 27981.80034 27923.56913 28782.65913 24059.01698 23024.86166 22445.59386 21340.64285 26171.2302 1.05121197 1.009812886 1.069181698 1.066956689 1.09978243 0.919292551 0.879777584 0.857643821 0.815423757 1 14.67569412 -6.879546456 4.762125427 0.879344379 1.057174045 0.741444879 0.048749016 0.103540006 3.864730689 0.017284219 0.015232896 1.32E-07 6.879546456 0.177829667 SVSCS(ph)DEDEKPR ddPTM_A459_MK2206_30min_R2 1 SVSCSDEDEKPR 12 1 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4;Q7Z589-2 Q7Z589 EMSY;C11orf30 Protein EMSY 1 SVS(0.011)CS(0.989)DEDEKPR 142.12 0.0044403 3311600 12015 11181 12042 12640 11381 10015 14046 9762.6 10315 10503 TRUE FALSE 12934.87764 10625.7678 12443.47427 11607.27157 10934.12476 10396.12784 12201.74333 11038.60534 11212.18005 10160.28797 1.273081794 1.045813645 1.224716692 1.142415609 1.076162879 1.023211928 1.200924951 1.08644611 1.103529751 1 13.31065367 -1.522878755 0.030454296 0.55778659 1.932933085 0.318676548 0.070998462 1769.62383 4.146766194 59.34137696 145.5366516 0.029999999 1.522878755 1.375146495 SVSEESANSLVS(ph)VGVEAK ddPTM_A459_MK2206_30min_R2 1 SVSEESANSLVSVGVEAK 18 0 Q8NEZ4;Q8NEZ4-3;C9J4Z5;H0YMU7 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 S(0.011)VS(0.092)EES(0.009)ANS(0.033)LVS(0.855)VGVEAK 84.718 0.0079065 3256000 9505 13346 10906 15974 14553 9979.5 14445 11196 13609 11934 TRUE FALSE 10232.71011 12683.25705 11269.6006 14668.8731 13981.5761 10359.27687 12548.35415 12659.35564 14792.68622 11544.59456 0.886363749 1.098631657 0.976179851 1.270626961 1.211092865 0.89732704 1.086946283 1.096561302 1.281351731 1 13.49492989 -4.07438404 1.356730736 1.109393266 4.41E-09 0.226124644 0.118931205 12.06588406 4.907737035 0.034731041 29.41144751 8.43E-05 4.07438404 -1.109393262 SVSEINS(ph)DDELSGK ddPTM_A459_MK2206_30min_R2 2 SVSEINSDDELSGK 14 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 SVSEINS(1)DDELSGK;SVS(0.001)EINS(0.962)DDELS(0.037)GK 216.77 1.28E-08 73410000 97117 105950 103879 114912 102660 87275 114611 90903 86641 103312 TRUE FALSE 104552.3522 100688.6771 107342.274 105523.322 98629.05257 90596.31128 99562.43803 102784.3342 94176.87757 99940.9379 1.046141395 1.007481811 1.074057101 1.055856831 0.986873394 0.90649851 0.996212764 1.028450767 0.942325333 1 16.60878814 -6.327183403 5.525374376 0.974951866 1.045088985 0.487289227 0.034830485 0.200284191 12.05783879 0.011299781 0.012931395 4.71E-07 6.327183403 0.070137119 SVSGS(ph)PEPAAK ddPTM_A459_MK2206_30min_R1 4 SVSGSPEPAAK 11 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 SVS(0.013)GS(0.986)PEPAAK;S(0.003)VS(0.006)GS(0.99)PEPAAK;S(0.002)VS(0.008)GS(0.99)PEPAAK;S(0.028)VS(0.058)GS(0.914)PEPAAK 184.31 2.59E-05 175266000 38425.8 37227.6 37263.1 33198.3 32340.8 31610.2 36997.2 35971.2 27470.6 31656 TRUE FALSE 35157.48393 34804.07647 34733.78459 35755.23882 31052.59745 33399.94221 34529.18429 35656.70759 30326.26717 35577.78427 0.988186438 0.978253064 0.97627734 1.004987791 0.872808639 0.938786462 0.970526552 1.002218332 0.852393363 1 15.11868904 SVSGS(ph)PEPAAK ddPTM_A459_MK2206_30min_R2 5 SVSGSPEPAAK 11 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 SVS(0.005)GS(0.995)PEPAAK;S(0.001)VS(0.054)GS(0.945)PEPAAK;S(0.002)VS(0.01)GS(0.988)PEPAAK;S(0.238)VS(0.071)GS(0.691)PEPAAK;S(0.003)VS(0.008)GS(0.989)PEPAAK 165.35 0.00061227 220884700 451063 481676 442826 487637 484652 420562 547985 464937 446746 507686 TRUE FALSE 485596.7301 457756.6703 457589.5978 447795.4972 465622.1273 436566.7816 476033.9113 525705.8623 485603.1595 491120.2474 0.988753228 0.932066378 0.931726192 0.911783824 0.948081717 0.888920349 0.969281787 1.070421888 0.98876632 1 18.90571678 -7.538183069 10.3636596 1.021817518 0.932736203 0.606223564 0.031087984 0.19643381 125.4969425 0.013800866 0.008072408 2.90E-08 7.538183069 -0.089081314 SVSGS(ph)PESDELQELR ddPTM_A459_MK2206_30min_R2 1 SVSGSPESDELQELR 15 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SVS(0.011)GS(0.975)PES(0.014)DELQELR 130.47 0.00079443 3276000 7589.7 8830.2 6346.9 11206 9537 11259 10120 9888.5 8728.9 9756.3 TRUE FALSE 8170.773267 8391.705108 6558.502478 10290.43395 9162.52946 11687.46913 8791.231844 11180.9609 9488.123944 9437.95273 0.865735769 0.889144643 0.694907324 1.090324803 0.970817477 1.23834792 0.931476571 1.184680748 1.0053159 1 13.20425823 -5.777523758 24.99807957 1.066175585 0.823850781 0.548390535 0.101110924 161.2846514 250665.5607 0.026715784 0.039765636 1.67E-06 5.777523758 -0.242324804 SVSGSPES(ph)DELQELR ddPTM_A459_MK2206_30min_R1 1 SVSGSPESDELQELR 15 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 S(0.002)VS(0.001)GS(0.038)PES(0.959)DELQELR 199.15 2.30E-05 4346300 952.75 976.84 1232 919.86 1225.1 958.12 1069.4 1030.8 957.32 975.46 TRUE FALSE 871.7136094 913.2475385 1148.375273 990.7077766 1176.301673 1012.367926 998.0622772 1021.787824 1056.83684 1096.307349 0.795136154 0.833021451 1.047493911 0.903677037 1.07296706 0.923434407 0.910385466 0.932026794 0.963996858 1 10.0984366 -5.114268064 5.986962961 0.964149582 0.804319042 0.568473942 0.054306515 0.151449849 6.787550038 0.013578364 0.037536238 7.69E-06 5.114268064 -0.15983054 SVSGSPES(ph)DELQELR ddPTM_A459_MK2206_30min_R2 1 SVSGSPESDELQELR 15 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 S(0.004)VS(0.003)GS(0.259)PES(0.734)DELQELR 236.78 6.63E-20 2470200 5740.2 7374.6 7729 12571 8701.4 9812.9 12055 8135.9 8964.4 11519 TRUE FALSE 6179.674125 7008.388088 7986.681002 11543.90909 8359.739315 10186.33679 10472.16402 9199.290065 9744.107308 11143.13597 0.554572262 0.628942167 0.716735488 1.035965918 0.750214243 0.914135555 0.939786075 0.825556655 0.874449287 1 13.44386768 -5.545674332 4.74087032 0.894023726 0.606349232 0.720511838 0.079752056 0.095982755 5.483751727 0.021126275 0.039678151 2.85E-06 5.545674332 -0.287674494 SVSHPGS(ph)CSSER ddPTM_A459_MK2206_30min_R1 1 SVSHPGSCSSER 12 0 Q9HB20;H7C0Q0 Q9HB20 PLEKHA3 Pleckstrin homology domain-containing family A member 3 1 SVS(0.209)HPGS(0.7)CS(0.063)S(0.028)ER 113.95 0.0057429 1273000 530.43 271.32 442.56 376.1 668.38 462.61 476.32 372.64 148.23 272.47 TRUE FALSE 485.3141431 253.6570187 412.5202602 405.0672872 641.7570093 488.8025784 444.5455619 369.3820478 163.6390389 306.2256406 1.584825301 0.828333702 1.347112082 1.322773907 2.095699785 1.596217016 1.451692814 1.206241407 0.53437406 1 8.258451276 -8.043756254 3.997550998 0.774013376 1.452607068 0.433729623 0.313453605 0.229506947 7.600174308 0.239896503 0.088359588 9.04E-09 8.043756254 0.678593692 SVSMLSLNT(ph)PNSNR ddPTM_A459_MK2206_30min_R1 1 SVSMLSLNTPNSNR 14 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C3G1 Q9H8V3-2 ECT2 Protein ECT2 1 SVSMLS(0.008)LNT(0.982)PNS(0.009)NR 96.707 0.027147 19846000 1816.2 1780 1799.3 1925.2 1913 1917.2 2001.6 1697.3 1951.8 1276.7 TRUE FALSE 1661.722653 1664.121676 1677.168529 2073.479238 1836.801159 2025.750207 1868.076916 1682.460685 2154.696595 1434.867235 1.158102027 1.159773975 1.1688667 1.445066963 1.280119244 1.411803238 1.301916213 1.172554955 1.501669662 1 10.48670154 -5.632401733 11.27950449 1.312695967 1.160319228 0.181126288 0.134781018 0.554878977 53.46282142 0.033951193 0.058821158 2.33E-06 5.632401733 -0.152376739 SVSMLSLNT(ph)PNSNR ddPTM_A459_MK2206_30min_R2 4 SVSMLSLNTPNSNR 14 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C3G1 Q9H8V3-2 ECT2 Protein ECT2 1 SVSMLSLNT(0.768)PNS(0.232)NR;SVSMLS(0.002)LNT(0.867)PNS(0.131)NR;SVSMLSLNT(0.954)PNS(0.046)NR;SVSMLSLNT(0.991)PNS(0.009)NR 192.46 0.00023559 29732400 108804 151645 133061 144162 153503 149627 135804 104568 123719 127278 TRUE FALSE 117134.1179 144114.5298 137497.1873 132383.5034 147475.7009 155321.1603 117972.7717 118235.3966 134479.855 123124.9293 0.951343636 1.170474011 1.116729066 1.075196585 1.197772878 1.261492382 0.958155041 0.960288037 1.0922228 1 16.90976337 -7.290246801 24.99309389 0.999357129 1.130872673 0.351091233 0.083955003 828.6758295 718949.0596 0.035627719 0.024025847 5.13E-08 7.290246801 0.131515544 SVSMLSLNTPNS(ph)NR ddPTM_A459_MK2206_30min_R1 1 SVSMLSLNTPNSNR 14 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C3G1 Q9H8V3-2 ECT2 Protein ECT2 1 SVSMLS(0.001)LNT(0.211)PNS(0.789)NR 95.195 0.012668 22497000 1873.4 1500.1 1787.6 1726.3 2013.9 1618.2 1975.8 1500.3 1385.7 1328.4 TRUE FALSE 1714.057492 1402.443217 1666.262693 1859.259925 1933.682098 1709.821086 1843.997987 1487.183035 1529.748474 1492.972221 1.148083982 0.939363236 1.116070794 1.245341272 1.295189603 1.145246416 1.235118753 0.996122376 1.024632912 1 10.54397161 -7.777609342 24.92744689 1.007783142 1.158248211 0.374819573 0.090933842 301.4680642 464733.1426 0.055594257 0.026836965 1.67E-08 7.777609342 0.150465069 SVSPS(ph)PVPLLFQPDQNAPPIR ddPTM_A459_MK2206_30min_R2 1 SVSPSPVPLLFQPDQNAPPIR 21 0 Q02241-2;Q02241-3 Q02241-2 KIF23 Kinesin-like protein KIF23 1 S(0.046)VS(0.185)PS(0.769)PVPLLFQPDQNAPPIR 113.81 8.39E-05 42271000 11701 20327 14718 17337 16791 18773 21760 14582 14827 18093 TRUE FALSE 12596.83756 19317.59074 15208.69077 15920.51164 16131.70097 19487.41967 18902.88586 16487.91747 16116.62566 17502.62689 0.719711254 1.103696654 0.86893761 0.909606983 0.921673134 1.113399708 1.080002789 0.942025307 0.920811816 1 14.09528385 -6.563945436 24.97838002 1.012545659 0.913110661 0.212673266 0.101959551 257.1872843 156429.7898 0.03321793 0.033217967 2.73E-07 6.563945436 -0.099434997 SVSPS(ph)PVPLSSNYIAQISNGQQLMSQPQLHR ddPTM_A459_MK2206_30min_R1 1 SVSPSPVPLSSNYIAQISNGQQLMSQPQLHR 31 0 Q02241;H7BYN4 Q02241 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 S(0.048)VS(0.138)PS(0.654)PVPLS(0.05)S(0.05)NY(0.06)IAQISNGQQLMSQPQLHR 92.552 2.13E-07 18890000 4562.7 4256.5 3968.1 3794.2 4360.3 5348.1 3941.7 4297 3685.5 2914.7 TRUE FALSE 4174.618405 3979.401076 3698.756428 4086.429941 4186.620018 5650.9048 3678.756385 4259.431782 4068.620914 3275.795041 1.274383273 1.214789395 1.129117171 1.247462033 1.278046998 1.725048341 1.123011769 1.300274202 1.242025482 1 11.67762938 -9.013522467 1.448580966 0.999988582 1.287996248 0.225678106 0.1583948 4.06224429 10.32031965 0.157496248 0.045786041 9.69E-10 9.013522467 0.288007666 SVSPTFLNPS(ph)DENLK ddPTM_A459_MK2206_30min_R1 1 SVSPTFLNPSDENLK 15 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 S(0.022)VS(0.22)PT(0.047)FLNPS(0.711)DENLK 115.7 0.0023435 4312500 2114 2050.6 2550.8 2236.3 2503.7 2403.8 2395.2 2276.5 2357.8 2265.1 TRUE FALSE 1934.193199 1917.105567 2377.658803 2408.540213 2403.972327 2539.901079 2235.420578 2256.596801 2602.901747 2545.717689 0.759783069 0.753070765 0.933983691 0.94611442 0.944320078 0.997715139 0.878110164 0.886428535 1.022462844 1 11.31385672 -5.275616672 5.5270166 0.946361897 0.754764129 0.754934016 0.044337393 0.074323513 8.265443698 0.011605286 0.027050278 5.30E-06 5.275616672 -0.191597768 SVSPTTEMVS(ph)NESVDYR ddPTM_A459_MK2206_30min_R1 1 SVSPTTEMVSNESVDYR 17 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 1 SVSPT(0.006)T(0.002)EMVS(0.854)NES(0.138)VDYR 127.88 0.0010581 6648300 1158.1 868.01 975.91 818.63 1282.9 1370.5 1657.7 1013.2 1373.8 1308 TRUE FALSE 1059.597514 811.5023912 909.6679482 881.6810244 1231.799376 1448.096526 1547.117858 1004.341699 1516.611426 1470.044915 0.720792612 0.552025576 0.618802826 0.599764684 0.837933157 0.985069579 1.052428971 0.683204771 1.031676931 1 10.52164452 -6.39444174 3.397326894 0.935820281 0.616860468 0.684031511 0.104671848 0.149784536 3.198057705 0.033809784 0.038610246 4.03E-07 6.39444174 -0.318959813 SVSPTTEMVS(ph)NESVDYR ddPTM_A459_MK2206_30min_R2 1 SVSPTTEMVSNESVDYR 17 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 1 SVSPTTEMVS(1)NESVDYR 170.48 8.54E-07 5544400 7362 8070.6 6563.1 6506.8 7072.4 9815.3 10636 6058.6 11049 9689.1 TRUE FALSE 7925.64038 7669.82574 6781.910478 5975.173626 6794.70204 10188.82812 9239.480424 6850.479822 12010.02205 9372.94546 0.845586952 0.818294075 0.723562354 0.63749156 0.724927086 1.08704656 0.985760609 0.73087802 1.281349827 1 13.19428677 -6.751879491 24.99936308 0.998233982 0.746051848 0.484732256 0.136946619 187.0717866 489196.9403 0.045147564 0.044589115 1.77E-07 6.751879491 -0.252182134 SVSS(ph)DSLGPPRPAPAR ddPTM_A459_MK2206_30min_R1 1 SVSSDSLGPPRPAPAR 16 1 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 SVS(0.295)S(0.697)DS(0.008)LGPPRPAPAR 142.95 0.0018658 4928200 1725.1 1390.3 2064.5 1674.1 1768.5 1336.6 1633.8 1381.7 1608.6 1484.8 TRUE FALSE 1578.371186 1299.791217 1924.367492 1803.039472 1698.0569 1412.277137 1524.812183 1369.619943 1775.819726 1668.748234 0.945841412 0.778901928 1.153180242 1.080474236 1.017563264 0.846309292 0.913746096 0.820746902 1.06416276 1 10.70455059 -6.736079557 24.93184583 0.916836714 0.996691108 0.075594656 0.111713904 551.5928463 542282.7076 0.038439244 0.038425604 1.84E-07 6.736079557 0.079854394 SVSS(ph)PTSSNTPTPTK ddPTM_A459_MK2206_30min_R1 1 SVSSPTSSNTPTPTK 15 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 SVS(0.083)S(0.915)PT(0.001)SSNTPTPTK 214.58 2.91E-07 18288000 1451.1 1334.7 1298.8 993.9 1494.6 935.85 1483.8 1100.9 956.55 1108.1 TRUE FALSE 1327.676325 1247.810787 1210.641075 1070.45035 1435.066917 988.8370183 1384.818409 1091.274947 1055.986796 1245.379794 1.066081473 1.00195201 0.972105924 0.859537272 1.152312671 0.794004386 1.111964733 0.876258755 0.847923502 1 10.28237006 -4.91944431 1.951302781 0.950993673 1.081962381 0.098851414 0.108809984 1.368483775 7.072681326 0.028180683 0.296309285 1.20E-05 4.91944431 0.130968708 SVSS(ph)PTSSNTPTPTK ddPTM_A459_MK2206_30min_R2 3 SVSSPTSSNTPTPTK 15 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 SVS(0.019)S(0.981)PTSSNTPTPTK;S(0.002)VS(0.085)S(0.848)PT(0.055)S(0.008)S(0.002)NTPTPTK;SVSS(0.999)PTSSNTPTPTK 331.8 3.80E-127 67267000 202013 232838 223677 256909 249889 237883 259256 212970 224205 267549 TRUE FALSE 217479.2706 221275.6035 231134.2795 235918.7129 240077.1023 246935.8043 225215.3758 240805.9102 243705.9456 258818.898 0.840275854 0.854943766 0.893034787 0.911520429 0.927587221 0.954087225 0.870165886 0.93040312 0.941608003 1 17.98158344 -1.522878745 0.113990245 1.018686527 0.492691258 0.708539029 0.025022353 64.46235993 0.51181277 0.223771713 5.349871208 0.03 1.522878745 -0.525995269 SVSS(ph)SSYR ddPTM_A459_MK2206_30min_R1 1 SVSSSSYR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SVS(0.109)S(0.698)S(0.192)S(0.001)YR 101.65 0.016864 49997000 3091.7 3330.4 3017.7 2720.1 3067.8 3517.6 3284.3 2274.4 1775 2396.1 TRUE FALSE 2828.73468 3113.590355 2812.866932 2929.602573 2945.60303 3716.763472 3065.21034 2254.515161 1959.517602 2692.946958 1.050423467 1.156201887 1.044531131 1.087879791 1.093821407 1.380184434 1.138236433 0.837192561 0.72764805 1 11.3949701 -7.761341461 11.52323693 0.836681287 1.139135993 0.581633913 0.108838218 0.054771973 276.3134717 0.056606553 0.029939152 1.73E-08 7.761341461 0.302454706 SVSS(ph)YGNIR ddPTM_A459_MK2206_30min_R1 2 SVSSYGNIR 9 0 Q8N122;Q8N122-3 Q8N122 RPTOR Regulatory-associated protein of mTOR 1 SVS(0.042)S(0.958)YGNIR;SVS(0.131)S(0.869)YGNIR 155.53 0.00082538 77244000 7647.1 5884.2 7794 7126.5 9791.4 5825.6 9256.9 7505.6 7469.2 6443.4 TRUE FALSE 6996.673988 5501.13751 7264.964995 7675.384265 9401.387804 6155.440438 8639.389091 7439.979331 8245.650069 7241.657037 0.966170305 0.75965176 1.003218595 1.059893368 1.298237096 0.850004413 1.193012738 1.027386314 1.138641339 1 12.82210414 -5.497683442 3.980969689 1.084468543 0.862693734 0.332879068 0.121807457 0.221783815 7.76614987 0.031310532 0.064766131 3.18E-06 5.497683442 -0.221774808 SVSS(ph)YGNIR ddPTM_A459_MK2206_30min_R2 4 SVSSYGNIR 9 0 Q8N122;Q8N122-3 Q8N122 RPTOR Regulatory-associated protein of mTOR 1 SVS(0.045)S(0.955)YGNIR;SVS(0.024)S(0.976)YGNIR;SVS(0.116)S(0.884)YGNIR;SVS(0.12)S(0.88)YGNIR 181.87 0.00086245 84412000 345312 334176 367200 380057 377555 406099 432276 286270 304322 385225 TRUE FALSE 371749.3522 317581.3058 379442.2647 349005.1274 362730.2936 421553.382 375517.6419 323686.4719 330791.3775 372655.1398 0.997569368 0.852212332 1.018212884 0.936536465 0.97336721 1.1312158 1.00768137 0.868595217 0.887660848 1 18.50748163 -1.522908872 0.002399836 1.505764735 0.412039813 0.001355614 0.079563914 4109549.426 783.8250064 172532.1314 184893.6511 0.029997919 1.522908872 -1.093724922 SVSSNVASVS(ph)PIPAGSK ddPTM_A459_MK2206_30min_R1 2 SVSSNVASVSPIPAGSK 17 0 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 SVSSNVAS(0.01)VS(0.806)PIPAGS(0.184)K;SVS(0.001)S(0.002)NVAS(0.047)VS(0.951)PIPAGSK 257.06 4.94E-40 43024000 24551.4 20172.2 20155.5 16370.9 18989.7 16189.3 19244.6 17400.5 17671.8 15014.8 TRUE FALSE 22463.17451 18858.98611 18787.40082 17631.78955 18233.30004 17105.92418 17960.82785 17248.36926 19508.84685 16874.94678 1.33115528 1.117573072 1.113330967 1.044850084 1.080495262 1.013687593 1.064348711 1.02212881 1.156083459 1 14.04259533 SVSSNVASVS(ph)PIPAGSK ddPTM_A459_MK2206_30min_R2 3 SVSSNVASVSPIPAGSK 17 0 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 SVS(0.001)S(0.001)NVAS(0.377)VS(0.601)PIPAGS(0.021)K;SVSSNVAS(0.032)VS(0.968)PIPAGSK;SVSSNVAS(0.001)VS(0.982)PIPAGS(0.016)K 248.23 2.05E-30 122758000 228899 206262 187488 216615 220967 178696 228774 156838 165099 215295 TRUE FALSE 246423.6834 196019.329 193738.7563 198916.8616 212290.7253 185496.4015 198735.699 177337.2651 179459.0126 208269.9418 1.183193702 0.941179161 0.93022908 0.95509155 1.019305635 0.890653735 0.954221705 0.85147796 0.861665448 1 17.66809511 -4.761184679 5.775631527 0.930960129 1.19380391 0.679404835 0.051419141 0.085145416 10.01679583 0.013288166 0.089055356 1.73E-05 4.761184679 0.262843781 SVSSNVASVS(ph)PIPAGSKK ddPTM_A459_MK2206_30min_R1 1 SVSSNVASVSPIPAGSKK 18 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 SVSSNVAS(0.006)VS(0.716)PIPAGS(0.278)KK 136.61 0.00062836 8319900 2556.6 2624.6 2474.2 2132.2 2194 2144.7 2215.6 2353.4 1705.7 1489.8 TRUE FALSE 2339.147745 2453.738063 2306.258198 2296.422413 2106.608334 2266.131061 2067.801367 2332.824472 1883.013619 1674.367671 1.39703351 1.465471476 1.377390544 1.371516216 1.258151582 1.353424997 1.234974493 1.393256996 1.124611787 1 10.70940065 -13.66452947 0.090052825 8.40E-08 1.64369411 0.767134859 0.065836162 78.59574118 0.584164217 15.88321643 1.5694289 2.17E-14 13.66452947 1.643694026 SVSSNVASVS(ph)PIPAGSKK ddPTM_A459_MK2206_30min_R2 1 SVSSNVASVSPIPAGSKK 18 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 SVSSNVAS(0.006)VS(0.994)PIPAGSKK 108.96 0.00076078 20474000 45466 55386 50700 58126 63164 53710 61874 43063 51241 62578 TRUE FALSE 48946.91192 52635.61178 52390.3127 53376.91986 60683.86399 55753.97169 53749.86948 48691.48196 55697.84956 60536.08498 0.808557605 0.869491507 0.865439394 0.88173723 1.002441172 0.921003922 0.887898011 0.804338139 0.920076836 1 15.88550776 -5.016651968 1.166547579 0.909910749 0.794022144 0.26866968 0.054960978 1.768154347 2.69144828 0.018364058 0.22661057 9.62E-06 5.016651968 -0.115888605 SVSSNVASVSPIPAGS(ph)K ddPTM_A459_MK2206_30min_R1 2 SVSSNVASVSPIPAGSK 17 0 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 SVSSNVAS(0.001)VS(0.412)PIPAGS(0.588)K;SVSSNVASVS(0.045)PIPAGS(0.955)K 191.41 7.88E-08 41372000 20053.7 16765.8 16273.2 13269.9 16177 13473.6 16252.1 14724.1 13445.1 13919.2 TRUE FALSE 18348.02751 15674.34337 15168.62052 14291.95 15532.63583 14236.46359 15167.95206 14595.36875 14842.76626 15643.61558 1.172876399 1.001964239 0.969636491 0.913596344 0.992905748 0.910049439 0.969593761 0.932992036 0.948806635 1 13.93328637 -4.629644533 1.848425164 0.950565549 1.31531137 0.838286705 0.028700183 0.454089051 1.163560342 0.00712867 0.328165583 2.35E-05 4.629644533 0.364745822 SVSSNVASVSPIPAGS(ph)K ddPTM_A459_MK2206_30min_R2 1 SVSSNVASVSPIPAGSK 17 0 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 SVSSNVAS(0.174)VS(0.29)PIPAGS(0.535)K 103.88 0.0030038 7378000 72232 69143 57463 70179 75070 62949 75703 56895 56199 78832 TRUE FALSE 77762.13746 65709.45916 59378.78774 64445.15121 72122.3746 65344.56831 65763.10516 64331.37185 61087.08744 76259.7183 1.019701347 0.861653578 0.77863896 0.845074604 0.94574667 0.856868734 0.862357043 0.843582605 0.801040035 1 16.21863358 SVSSPTSS(ph)NTPTPTK ddPTM_A459_MK2206_30min_R1 1 SVSSPTSSNTPTPTK 15 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 SVSSPT(0.119)S(0.028)S(0.835)NT(0.018)PTPTK 191.15 2.83E-05 4241900 2529.2 2415.2 1981.6 1962.4 2490.6 2556.1 3535.9 3016.3 2644.7 2899.4 TRUE FALSE 2314.078259 2257.970041 1847.094513 2113.544388 2391.394128 2700.824173 3300.026563 2989.928807 2919.626029 3258.599561 0.710145022 0.692926516 0.566836912 0.648605129 0.733871739 0.828829723 1.01271313 0.917550239 0.895975702 1 11.67003636 -6.81952335 2.024956511 0.949638032 0.6536053 0.87749659 0.050756607 0.109643919 0.92414815 0.021640107 0.019101655 1.52E-07 6.81952335 -0.296032732 SVSSPTSS(ph)NTPTPTK ddPTM_A459_MK2206_30min_R2 1 SVSSPTSSNTPTPTK 15 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 SVS(0.008)SPT(0.003)S(0.081)S(0.869)NT(0.04)PTPTK 222.64 1.27E-09 5896700 21361 19523 24559 23797 21552 28927 25425 17904 26393 25601 TRUE FALSE 22996.41458 18553.51621 25377.7848 21852.70898 20705.76019 30027.83726 22086.66696 20244.11427 28688.61543 24765.64147 0.928561233 0.749163563 1.024717443 0.882380091 0.836067994 1.212479689 0.891826969 0.817427415 1.158403891 1 14.59605237 SVSSPTSSNT(ph)PTPTK ddPTM_A459_MK2206_30min_R1 1 SVSSPTSSNTPTPTK 15 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 SVSSPTS(0.015)S(0.015)NT(0.968)PT(0.001)PTK 236.31 1.77E-64 0 1781.7 1997.4 1269.3 1150.9 1838.9 1645.7 2063.9 1975 1928.9 1878 TRUE FALSE 1630.157059 1867.368897 1183.143452 1239.542517 1765.652719 1738.878112 1926.220997 1957.732783 2129.416058 2110.660818 0.772344398 0.884731872 0.560555937 0.587276983 0.836540246 0.823854831 0.91261513 0.92754495 1.008885956 1 11.04347904 -7.103395145 1.220513117 0.980966854 0.711910426 0.60604377 0.092061753 0.361523559 1.080711896 0.060761956 0.039962425 7.88E-08 7.103395145 -0.269056428 SVSSPTSSNT(ph)PTPTK ddPTM_A459_MK2206_30min_R2 2 SVSSPTSSNTPTPTK 15 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 SVS(0.001)S(0.029)PT(0.026)S(0.009)S(0.006)NT(0.858)PT(0.071)PTK;SVSSPTS(0.004)S(0.031)NT(0.924)PT(0.04)PTK 164.41 2.09E-05 4323200 25879 25558 26594 25143 30024 27556 26601 18904.4 29897 30137 TRUE FALSE 27860.31614 24288.82688 27480.63069 23088.73647 28845.1069 28604.66289 23108.25675 21375.26999 32497.38702 29153.63216 0.955637911 0.833132104 0.942614304 0.79196775 0.989417262 0.981169781 0.792637316 0.733194062 1.11469428 1 14.83138801 -8.280606065 24.99447305 1.057347161 0.879674993 0.400153879 0.088059476 972.3856477 1268035.013 0.085260234 0.022158617 5.24E-09 8.280606065 -0.177672168 SVSSS(ph)SYR ddPTM_A459_MK2206_30min_R2 2 SVSSSSYR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SVS(0.022)S(0.134)S(0.841)S(0.004)YR;S(0.013)VS(0.03)S(0.194)S(0.761)S(0.003)YR 109.44 0.01245 146436000 716950 885670 616290 1017020 776590 715120 1037570 769490 604160 735110 TRUE FALSE 771840.2432 841688.9157 636836.801 933926.2127 746097.1745 742334.3927 901335.8127 870064.9851 656708.7447 711123.4209 1.085381553 1.183604549 0.895536249 1.313311002 1.04918099 1.043889669 1.267481546 1.223507706 0.923480686 1 19.43974045 -8.273095715 24.56758013 0.961740313 1.131289461 0.253227125 0.117437836 933.2835963 1967017.171 0.107082769 0.028601037 5.33E-09 8.273095715 0.169549148 SVSSS(ph)SYRR ddPTM_A459_MK2206_30min_R1 3 SVSSSSYRR 9 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SVSSS(0.5)S(0.5)YRR;SVS(0.002)S(0.088)S(0.455)S(0.455)YRR;SVSS(0.003)S(0.608)S(0.389)YRR 90.149 0.01485 170372700 8349.7 8293.4 7465.8 6851.9 6778.7 6158.6 8142 7970.7 875.03 5149.63 TRUE FALSE 7639.514169 7753.498153 6959.042297 7379.634525 6508.690025 6507.29461 7598.862036 7901.01301 965.9924998 5787.605042 1.319978491 1.33967299 1.202404491 1.275075696 1.124591256 1.124350152 1.312954492 1.365161056 0.166907122 1 12.49875076 -8.244418591 24.9985801 0.583453513 1.252387186 0.638911789 0.202813735 400.3503532 588000.4183 0.126816707 0.047666358 5.70E-09 8.244418591 0.668933673 SVSSS(ph)SYRR ddPTM_A459_MK2206_30min_R2 2 SVSSSSYRR 9 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SVS(0.001)S(0.089)S(0.455)S(0.455)YRR;SVS(0.001)S(0.094)S(0.453)S(0.453)YRR 80.916 0.023202 365670000 8374.4 9833.9 8002.5 10222.8 9621.1 10490.5 10713.5 6824.8 8544.1 8620.6 TRUE FALSE 9015.550503 9345.562826 8269.299356 9387.564539 9243.327272 10889.72333 9306.804581 7716.824793 9287.250374 8339.310528 1.081090634 1.120663728 0.991604681 1.125700321 1.108404255 1.305830175 1.116016072 0.925355252 1.113671249 1 13.0257124 -10.59086438 4.938038664 0.999997532 1.09878187 0.091978503 0.093037865 2.67E-06 5.04E-07 0.095254891 0.023102127 2.57E-11 10.59086438 0.098784338 SVSSSS(ph)YR ddPTM_A459_MK2206_30min_R1 1 SVSSSSYR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SVS(0.007)S(0.04)S(0.072)S(0.882)YR 109.48 0.012433 17138000 8978 8839.2 7761.1 5992.7 6609.2 7191.8 9309.6 7374.4 2900.5 10223 TRUE FALSE 8214.373955 8263.766473 7234.298156 6454.258792 6345.941569 7598.993501 8688.57357 7309.926398 3202.017355 11489.50242 0.714946014 0.71924494 0.629644165 0.561752681 0.552325187 0.661385778 0.756218438 0.636226542 0.27869069 1 13.4880287 -8.020751923 24.93828894 0.578716516 0.653691076 0 0.174763206 3327.842819 3999156.87 0.10867875 0.042104199 9.53E-09 8.020751923 0.07497456 SVSSSS(ph)YR ddPTM_A459_MK2206_30min_R2 1 SVSSSSYR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SVS(0.033)S(0.033)S(0.063)S(0.872)YR 115.49 0.0098151 15728000 133110 120570 129440 135570 101650 134960 123990 106610 93877 120620 TRUE FALSE 143301.0039 114582.6691 133755.465 124493.4973 97658.71025 140095.9974 107709.9641 120544.293 102042.2518 116684.1793 1.22810997 0.981989759 1.146303345 1.066926966 0.836949026 1.200642608 0.9230897 1.033081724 0.8745166 1 16.83224944 -1.522878745 0.380519305 0.974548141 3.825562238 0.262291258 0.108418034 101.4428015 1.383890799 0.079926622 213.3535416 0.03 1.522878745 2.851014098 SVSSSS(ph)YRR ddPTM_A459_MK2206_30min_R1 2 SVSSSSYRR 9 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SVSS(0.03)S(0.155)S(0.815)YRR;SVS(0.001)S(0.025)S(0.136)S(0.837)Y(0.001)RR 98.04 0.016222 132731000 8198.1 8128.7 7024.6 6525.1 6672.9 5753.5 8381.6 7461.5 888.81 4892.8 TRUE FALSE 7500.808545 7599.520153 6547.789724 7027.664333 6407.104263 6079.258198 7822.478757 7396.264892 981.2049801 5498.957003 1.364042043 1.381993012 1.190733028 1.277999506 1.165149002 1.10552932 1.422538629 1.345030501 0.178434743 1 12.42494229 -8.242357188 24.89272002 0.589217348 1.276766288 0.640060625 0.207669916 380.5919377 496484.1153 0.13096734 0.049325693 5.72E-09 8.242357188 0.68754894 SVSSVLSS(ph)LTPAK ddPTM_A459_MK2206_30min_R1 2 SVSSVLSSLTPAK 13 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 SVSSVLS(0.018)S(0.491)LT(0.491)PAK;SVSSVLS(0.018)S(0.491)LT(0.491)PAK 217.68 1.79E-08 82509000 10736.4 10759 8916.2 8151.4 7920.2 8569.2 7938.3 7972.2 7680 6280.6 TRUE FALSE 9823.212801 10058.58714 8310.993186 8779.22224 7604.721663 9054.380699 7408.750491 7902.499896 8478.363483 7058.688144 1.391648505 1.424993843 1.177413284 1.243747005 1.077356232 1.282728535 1.049593117 1.119542291 1.201124531 1 12.78518437 -1.522878745 0.296146487 1.078268517 4.123920449 0.628699516 0.081901025 33.55114084 0.477477513 0.081362172 53.89440671 0.03 1.522878745 3.045651932 SVSSVLSSLT(ph)PAK ddPTM_A459_MK2206_30min_R2 2 SVSSVLSSLTPAK 13 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 SVSSVLSS(0.001)LT(0.999)PAK;SVSSVLS(0.001)S(0.002)LT(0.998)PAK 191.19 0.00039642 76126000 117606 112896 100113 105895 120151 103634 123108 85530 81875 105390 TRUE FALSE 126610.0058 107289.7488 103450.7175 97243.03976 115433.268 107577.8645 106943.7717 96709.06467 88996.3395 101951.1329 1.241869532 1.052364459 1.014708856 0.9538201 1.13224115 1.055190476 1.048970901 0.94858254 0.872931344 1 16.63751828 -4.725935873 2.549510247 1.008088811 1.313462115 0.534903097 0.066481827 0.547498547 3.98994803 0.018544462 0.38805503 1.88E-05 4.725935873 0.305373304 SVST(ph)MNLSK ddPTM_A459_MK2206_30min_R2 1 SVSTMNLSK 9 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 S(0.308)VS(0.026)T(0.666)MNLSK 103.43 0.022233 0 53313 79785 69942 60543 64599 62389 59707 56718 54747 50553 TRUE FALSE 57394.68427 75822.99292 72273.83137 55596.44323 62062.51868 64763.25711 51867.39918 64131.23734 59508.7951 48903.45975 1.173632388 1.550462755 1.477887899 1.136861145 1.269082372 1.324308289 1.06060797 1.311384464 1.21686268 1 15.57764891 -12.26028328 0.051296513 1.11E-05 1.938083017 0.343395435 0.13312803 369.2514265 2.17670465 66.69931333 24.29156816 5.49E-13 12.26028328 1.938071876 SVST(ph)PSEAGSQDSGDGAVGSR ddPTM_A459_MK2206_30min_R1 2 SVSTPSEAGSQDSGDGAVGSR 21 0 E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E9PGG1;E7ETL8;E7ESD3;E7EMU4;Q13409;Q13409-7;Q13409-5;E7ET01;E7ERR6;E7EUM4;E7ERH4 E7EQL5 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 SVS(0.007)T(0.99)PS(0.002)EAGSQDSGDGAVGSR;S(0.001)VS(0.033)T(0.897)PS(0.07)EAGSQDSGDGAVGSR 359.08 1.85E-217 17529800 4368.7 4080 3668.2 3337.7 4087.3 3369.5 4032.9 3782.1 3380.9 2753.55 TRUE FALSE 3997.119124 3814.391258 3419.212804 3594.770232 3924.494186 3560.278178 3763.872599 3749.033498 3732.356654 3094.680562 1.2916096 1.232563808 1.104867768 1.16159654 1.268141932 1.150450945 1.216239455 1.21144442 1.206055546 1 11.59557478 -10.65701805 4.06382345 0.999939657 1.202182791 0.579303735 0.052309441 12729779.95 0.901849774 7294.728818 0.012950964 2.20E-11 10.65701805 0.202243134 SVST(ph)PSEAGSQDSGDGAVGSR ddPTM_A459_MK2206_30min_R2 2 SVSTPSEAGSQDSGDGAVGSR 21 0 E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E9PGG1;E7ETL8;E7ESD3;E7EMU4;Q13409;Q13409-7;Q13409-5;E7ET01;E7ERR6;E7EUM4;E7ERH4 E7EQL5 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 S(0.002)VS(0.126)T(0.853)PS(0.019)EAGSQDSGDGAVGSR;SVS(0.025)T(0.975)PSEAGSQDSGDGAVGSR 259.55 7.42E-97 16426000 33972 42385 39738 45203 40236 41135 41704 30800 37328.7 34618.9 TRUE FALSE 36572.92244 40280.22253 41062.84509 41509.7703 38656.13247 42700.42125 36228.2147 34825.66575 40575.48285 33489.28813 1.092078228 1.2027793 1.22614864 1.239493958 1.154283493 1.275047146 1.081785154 1.039904629 1.21159586 1 15.03141209 -7.287186272 24.69281599 1.086646771 1.19964535 0.402908347 0.068514507 687.445495 659298.1536 0.027617127 0.018627219 5.16E-08 7.287186272 0.112998579 SVST(ph)TNIAGHFNDESPLGLR ddPTM_A459_MK2206_30min_R1 1 SVSTTNIAGHFNDESPLGLR 20 0 V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.28)VS(0.28)T(0.331)T(0.108)NIAGHFNDESPLGLR 64.545 0.024286 6561800 424.26 477.41 421.76 578.17 630.31 387.82 504.13 513.79 565.45 430.19 TRUE FALSE 388.1744591 446.3305222 393.1321063 622.7007536 605.203418 409.7780333 470.5004075 509.2979882 624.230551 483.485185 0.802867329 0.923152428 0.813121309 1.287941747 1.251751733 0.847550341 0.973143381 1.053389026 1.291105851 1 8.917327873 -5.734974127 24.99980823 1.093353421 0.854057413 0.407948225 0.14011164 253.1469661 239127.6976 0.040520992 0.07015708 1.84E-06 5.734974127 -0.239296008 SVSTPS(ph)EAGSQDSGDGAVGSR ddPTM_A459_MK2206_30min_R1 1 SVSTPSEAGSQDSGDGAVGSR 21 0 E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E9PGG1;E7ETL8;E7ESD3;E7EMU4;Q13409;Q13409-7;Q13409-5;E7ET01;E7ERR6;E7EUM4;E7ERH4 E7EQL5 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 SVSTPS(0.999)EAGSQDSGDGAVGS(0.001)R 239.87 4.74E-31 9348800 1186 997.37 1083.4 1100.2 1186.5 1015.8 1152.1 1256.9 853.26 960.58 TRUE FALSE 1085.124472 932.4410317 1009.861827 1184.937595 1139.239193 1073.313718 1075.245511 1245.911056 941.9594304 1079.583902 1.005132134 0.86370409 0.93541764 1.097587313 1.055257669 0.994192036 0.995981423 1.154065981 0.872520819 1 10.07625965 -5.651928388 8.424418681 1.029387493 0.926028017 0.218641326 0.076714661 0.322140693 22.81698677 0.019763998 0.034290648 2.23E-06 5.651928388 -0.103359476 SVSTPS(ph)EAGSQDSGDGAVGSR ddPTM_A459_MK2206_30min_R2 4 SVSTPSEAGSQDSGDGAVGSR 21 0 E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E9PGG1;E7ETL8;E7ESD3;E7EMU4;Q13409;Q13409-7;Q13409-5;E7ET01;E7ERR6;E7EUM4;E7ERH4 E7EQL5 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 SVS(0.012)T(0.049)PS(0.939)EAGSQDSGDGAVGSR;SVS(0.078)T(0.367)PS(0.55)EAGS(0.002)QDS(0.002)GDGAVGSR;S(0.1)VS(0.2)T(0.021)PS(0.68)EAGSQDSGDGAVGSR;SVS(0.004)T(0.004)PS(0.963)EAGS(0.004)QDS(0.023)GDGAVGSR 294.28 4.30E-87 41981000 52440 66109.8 62894 70651 72929 71072 67216 48154.1 69294 62902 TRUE FALSE 56454.84672 62826.88346 64990.85457 64878.5873 70065.44102 73776.69476 58390.45846 54448.00621 75321.06687 60849.51289 0.927778121 1.032496079 1.068058748 1.06621375 1.151454427 1.212445117 0.959587936 0.894797733 1.237825305 1 15.89295809 -4.697104059 1.883171227 1.073830668 0.85895707 0.159695659 0.101374662 2.123971989 6.656523464 0.028251075 0.868591604 2.01E-05 4.697104059 -0.214873598 SVSTPSEAGS(ph)QDSGDGAVGSR ddPTM_A459_MK2206_30min_R1 1 SVSTPSEAGSQDSGDGAVGSR 21 0 E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E9PGG1;E7ETL8;E7ESD3;E7EMU4;Q13409;Q13409-7;Q13409-5;E7ET01;E7ERR6;E7EUM4;E7ERH4 E7EQL5 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 S(0.001)VS(0.01)T(0.098)PS(0.333)EAGS(0.407)QDS(0.15)GDGAVGSR 260.98 1.26E-48 8664300 2524 2424.9 2163.8 2038.1 2534 2146.1 2875.4 2488.7 2049.3 2113.4 TRUE FALSE 2309.320546 2267.038569 2016.927285 2195.074815 2433.065414 2267.610327 2683.587312 2466.941558 2262.332068 2375.223947 0.972253816 0.954452557 0.849152471 0.924154886 1.024352006 0.954693274 1.129824965 1.0386143 0.952471059 1 11.21384783 -6.258721393 18.2279178 1.021150091 0.921688717 0.395189091 0.055320892 5.79742999 38871.09911 0.017283379 0.021201159 5.51E-07 6.258721393 -0.099461374 SVSTPSEAGSQDS(ph)GDGAVGSR ddPTM_A459_MK2206_30min_R2 1 SVSTPSEAGSQDSGDGAVGSR 21 0 E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E9PGG1;E7ETL8;E7ESD3;E7EMU4;Q13409;Q13409-7;Q13409-5;E7ET01;E7ERR6;E7EUM4;E7ERH4 E7EQL5 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 SVS(0.001)T(0.005)PS(0.307)EAGS(0.002)QDS(0.677)GDGAVGS(0.009)R 163.15 4.41E-08 10880000 10952 11367 9743.1 13081 12791 10691 16777 7326.7 12165 12248 TRUE FALSE 11790.49354 10802.53131 10067.93009 12012.24046 12288.76107 11097.8535 14574.15975 8284.324846 13223.08971 11848.34876 0.995117022 0.911733063 0.84973276 1.01383245 1.037170775 0.93665824 1.230058301 0.699196573 1.116028062 1 13.53239839 -5.789495787 24.94041722 1.000079903 0.918148098 0.081330209 0.131566728 546.147103 485489.0204 0.035427049 0.052559192 1.62E-06 5.789495787 -0.081931805 SVSTS(ph)PSILTAFLK ddPTM_A459_MK2206_30min_R1 2 SVSTSPSILTAFLK 14 0 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 SVST(0.028)S(0.908)PS(0.065)ILTAFLK;SVST(0.046)S(0.944)PS(0.01)ILTAFLK 180.3 7.36E-05 1680000 1730.07 1628.18 1495.05 1511.99 1527.69 1462.8 1679.57 1798.22 1735.28 1374.32 TRUE FALSE 1582.918462 1522.185186 1393.570171 1628.443732 1466.838872 1545.622472 1567.52895 1782.498352 1915.668566 1544.581137 1.024820531 0.985500308 0.902231769 1.054294716 0.949667736 1.000674186 1.014856981 1.154033485 1.240251172 1 10.59299994 -7.69777488 4.229810085 1.148886721 0.985694555 0.47703644 0.06740753 0.158079913 5.579385983 0.033232326 0.017663666 2.01E-08 7.69777488 -0.163192166 SVSTS(ph)PSILTAFLK ddPTM_A459_MK2206_30min_R2 1 SVSTSPSILTAFLK 14 0 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 SVST(0.079)S(0.918)PS(0.002)ILTAFLK 198.37 9.43E-05 24284000 52732 48073 48957 51210 38048 47834 55660 41731 51970 46980 TRUE FALSE 56769.20246 45685.76472 50589.20195 47025.97919 36554.04434 49654.35639 48351.77514 47185.38498 56490.25666 45447.04645 1.249128533 1.005252669 1.113146088 1.034742252 0.804321671 1.092576092 1.063914576 1.038249758 1.242990713 1 15.47189892 -10.67073255 14.91150935 0.999999835 1.061328586 0.025095055 0.119320838 0 0 0.115388337 0.027985782 2.13E-11 10.67073255 0.061328751 SVSTTGS(ph)LQR ddPTM_A459_MK2206_30min_R1 1 SVSTTGSLQR 10 0 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 SVS(0.032)T(0.002)T(0.001)GS(0.964)LQR 123.67 0.0040806 9829700 3367.9 2162.9 2036.3 1581.1 2143.3 2185.1 2305.2 1718.5 1264.1 1506.5 TRUE FALSE 3081.442419 2022.094817 1898.081629 1702.876596 2057.927822 2308.818474 2151.424314 1703.475336 1395.507719 1693.136593 1.819960912 1.194289241 1.121044597 1.005752638 1.215452924 1.36363391 1.270673803 1.006106266 0.824214493 1 10.72548265 -4.75602317 3.815350988 1.118809345 1.910856509 0.67633027 0.147915843 0.1832206 4.652304298 0.040580196 0.424635021 1.75E-05 4.75602317 0.792047164 SVSTTGS(ph)LQR ddPTM_A459_MK2206_30min_R2 1 SVSTTGSLQR 10 0 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460;Q7Z460-4 H0Y5T1;Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.234)VS(0.013)T(0.001)T(0.001)GS(0.751)LQR 94.767 0.023483 10959000 41673 40104 30863 35845 38611 34762 28658 25320 29599 27114 TRUE FALSE 44863.51692 38112.49368 31891.95702 32916.34884 37094.93814 36084.89227 24895.17018 28629.41094 32173.46752 26229.2724 1.710436959 1.453051884 1.215891792 1.254947081 1.41425723 1.375748885 0.949136895 1.091506104 1.226624476 1 14.67889017 -1.522878745 0.273857978 1.062917801 5.289760195 0.648661092 0.128806799 36.72556998 0.514868956 0.160938919 73.72139124 0.03 1.522878745 4.226842394 SVSVAT(ph)GLNMMK ddPTM_A459_MK2206_30min_R1 1 SVSVATGLNMMK 12 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 S(0.001)VS(0.048)VAT(0.952)GLNMMK 244.73 1.49E-13 33688000 2399.4 2023 2255.7 2101.5 2371.2 2022.2 2623.6 2236.2 1964.5 1589.7 TRUE FALSE 2195.31843 1891.302332 2102.589369 2263.357894 2276.750083 2136.695216 2448.584431 2216.649139 2168.716805 1786.644038 1.228738565 1.058578146 1.176837313 1.266820836 1.274316559 1.195926649 1.370493719 1.240677545 1.213849407 1 10.80303651 -5.573117136 5.657872376 1.239688521 1.137392113 0.083422965 0.096791505 0.309109485 21.99475949 0.024769017 0.044152598 2.67E-06 5.573117136 -0.102296408 SVSVDS(ph)GEQR ddPTM_A459_MK2206_30min_R2 1 SVSVDSGEQR 10 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 SVS(0.002)VDS(0.998)GEQR 86.114 0.035514 2862100 13681 15416 15070 19999 16124 19719 17284 11305 20593 16263 TRUE FALSE 14728.42788 14650.46386 15572.42628 18365.01773 15490.89074 20469.42036 15014.59004 12782.60232 22384.14192 15732.33964 0.936188019 0.931232365 0.989835373 1.167341803 0.984652702 1.301104656 0.95437744 0.812504853 1.422810747 1 13.94144562 -5.558892341 7.08297759 1.082609838 0.939949642 0.132434239 0.166308783 0.390999714 58.17277021 0.043976409 0.077502747 2.76E-06 5.558892341 -0.142660196 SVT(ph)PDSLGHTPPAR ddPTM_A459_MK2206_30min_R1 1 SVTPDSLGHTPPAR 14 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.002)VT(0.588)PDS(0.408)LGHT(0.002)PPAR 96.371 0.027698 6908300 1406 1177.2 1379.9 1061.7 1749.8 1638.5 1517.1 1232.3 1076.6 1068.3 TRUE FALSE 1286.412317 1100.564066 1286.236233 1143.472318 1680.101761 1731.270454 1415.897027 1221.526131 1188.516423 1200.649069 1.071430737 0.916640919 1.071284079 0.952378465 1.399327917 1.441945443 1.179276329 1.017388146 0.989894927 1 10.22959882 -6.212238106 24.99953024 1.186105822 1.001651913 0.223392322 0.152294622 606.4584955 308145.6764 0.049545182 0.063962435 6.13E-07 6.212238106 -0.184453908 SVT(ph)PPEEQQEAEEPK ddPTM_A459_MK2206_30min_R2 1 SVTPPEEQQEAEEPK 15 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(0.425)VT(0.575)PPEEQQEAEEPK 89.136 0.039539 10560000 42121 37424 36184 28204 30434 21581 33115 30664 25438 32866 TRUE FALSE 45345.81615 35565.57858 37390.3565 25899.64298 29239.00824 22402.28008 28766.96072 34671.89009 27650.55126 31793.58511 1.426256774 1.11864008 1.176034611 0.814618512 0.919651186 0.704616356 0.904803929 1.090530997 0.86968963 1 14.95644809 -4.990724047 1.12086041 0.900144878 1.52764964 0.651032824 0.116512458 0.769021899 1.029174581 0.038486243 0.524383646 1.02E-05 4.990724047 0.627504762 SVT(ph)PPPPPR ddPTM_A459_MK2206_30min_R1 1 SVTPPPPPR 9 0 O95835;O95835-2;H0YG09 O95835;H0YG09 LATS1 Serine/threonine-protein kinase LATS1 1 S(0.002)VT(0.998)PPPPPR 102.06 0.03851 4914200 4370.4 3396.3 3968.9 2659.4 3891.5 3537.6 3986.2 3438.1 3462.4 3332.6 TRUE FALSE 3998.67453 3175.200253 3699.502126 2864.227449 3736.493315 3737.895855 3720.287871 3408.041054 3822.32887 3745.467648 1.067603543 0.847744675 0.987727695 0.764718246 0.997603949 0.997978412 0.993277268 0.909910691 1.020521128 1 11.87093015 SVTEQGAELSNEER ddPTM_A459_MK2206_30min_R1 2 SVTEQGAELSNEER 14 0 E7EX29;P63104;E7ESK7;E5RGE1;E5RIR4;E9PD24;E7EVZ2 E7EX29 YWHAZ 14-3-3 protein zeta/delta 0 ; 174.57 0.0011553 149699000 2931.2 2940.6 2950.8 2856.22 3522.1 3175.5 3088.7 3015.1 2459.71 2590.2 FALSE TRUE 2681.886048 2749.166406 2750.507917 3076.206559 3381.807299 3355.294066 2882.658459 2988.739299 2715.405657 2911.093531 0.921264129 0.944375842 0.94483667 1.056718558 1.161696546 1.152588891 0.990232168 1.026672371 0.932778569 1 11.50734548 -5.747141844 6.68981127 1.054037249 0.936750968 0.357171972 0.066400358 0.174428633 32.67330439 0.020203481 0.033573153 1.79E-06 5.747141844 -0.117286281 SVTEQGAELSNEER ddPTM_A459_MK2206_30min_R2 2 SVTEQGAELSNEER 14 0 E7EX29;P63104;E7ESK7;E5RGE1;E5RIR4;E9PD24;E7EVZ2 E7EX29 YWHAZ 14-3-3 protein zeta/delta 0 ; 163.45 0.0037127 41158000 28833 38909 33893 49030 37361 42013 42935 30104.6 35610 37188 FALSE TRUE 31040.47665 36976.83564 35022.9757 45024.09216 35894.01942 43611.83415 37297.58293 34039.37458 38707.29343 35974.55861 0.86284524 1.027860718 0.973548448 1.251553706 0.997761218 1.212296574 1.036776666 0.946206872 1.075962984 1 15.13468937 -4.526099253 1.489891257 1.069464549 0.662696085 0.28729331 0.093951431 2.832500423 3.624298738 0.026321156 2.043435722 2.98E-05 4.526099253 -0.406768464 SVTPAS(ph)TLTK ddPTM_A459_MK2206_30min_R1 1 SVTPASTLTK 10 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(0.005)VT(0.131)PAS(0.674)T(0.19)LTK 93.561 0.025047 8290400 7462.8 6449.4 5016.2 4038 4623.9 4454.9 4502.8 3653.1 3222.2 3105.2 TRUE FALSE 6828.049671 6029.542888 4675.71432 4349.00746 4439.720272 4707.132588 4202.426428 3621.161332 3557.159221 3489.895619 1.956519741 1.727714392 1.339786295 1.246171214 1.272164201 1.348788933 1.204169662 1.037613077 1.019273815 1 11.76896817 -1.522878745 0.366587831 1.057653682 13.23888942 0.913948713 0.086330912 19.57039812 0.271378249 0.078843611 167.3508459 0.03 1.522878745 12.18123574 SVTS(ph)SPVEK ddPTM_A459_MK2206_30min_R2 3 SVTSSPVEK 9 0 Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3;G8JLP4;F8VVB8 Q9Y4F3-3;F8VVB8 KIAA0430 Meiosis arrest female protein 1 1 SVT(0.002)S(0.948)S(0.05)PVEK;SVT(0.191)S(0.748)S(0.06)PVEK;SVT(0.014)S(0.682)S(0.303)PVEK 164.48 1.53E-06 1439500 238780 230357 220606 231051 182524 185299 265610 215771 182410 242944 TRUE FALSE 257061.1804 218917.8064 227960.8939 212173.3942 175357.1907 192350.6833 230735.0879 243973.0106 198275.6921 235016.7572 1.093799368 0.931498711 0.969977191 0.902801131 0.746147606 0.818455184 0.98178143 1.038108999 0.84366619 1 17.8424041 -3.897243814 1.223447808 0.904580979 2.193120353 0.285146589 0.085418746 15.36725605 3.86297311 0.027369819 41.95459725 0.000126694 3.897243814 1.288539374 SVTVVEDDEDEDGDDLLHHHHVSGSR ddPTM_A459_MK2206_30min_R1 6 SVTVVEDDEDEDGDDLLHHHHVSGSR 26 0 P02545-2;Q5TCI8;Q3BDU5 P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ;;;;; 112.41 3.65E-09 93882100 12833 9548.66 10572.3 9530.78 16870.3 16909.1 16572.2 11491.2 9382.63 9151.41 FALSE TRUE 11741.48596 8927.040498 9854.681732 10264.84233 16198.32023 17866.47863 15466.69878 11390.73365 10357.98796 10285.15576 1.141595347 0.867953846 0.958146086 0.998024976 1.574922209 1.737113083 1.503788483 1.107492576 1.007081293 1 13.32827602 -6.186448909 8.869111076 1.356762568 0.978971255 0.310052328 0.237710488 0.487373146 54.38277883 0.076701655 0.099124757 6.51E-07 6.186448909 -0.377791313 SVTVVEDDEDEDGDDLLHHHHVSGSR ddPTM_A459_MK2206_30min_R2 7 SVTVVEDDEDEDGDDLLHHHHVSGSR 26 0 P02545-2;Q5TCI8;Q3BDU5 P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ;;;;;; 117.01 1.96E-09 115266600 139966.1 244262 194939.7 347579 325278 501554 311455 268508.4 360745 378788 FALSE TRUE 150682.0122 232132.3043 201438.8923 319180.6838 312505.9513 520640.9889 270560.5844 303603.3698 392121.948 366428.1786 0.411218408 0.633500145 0.549736358 0.87105933 0.852843666 1.420854125 0.738372757 0.828548096 1.070119524 1 18.48317093 -5.851255153 1.933747695 0.986817204 0.517631603 0.560014383 0.180224755 0.263596675 2.01145841 0.057684545 0.105713082 1.41E-06 5.851255153 -0.469185601 SVVS(ph)DLEADDVK ddPTM_A459_MK2206_30min_R1 3 SVVSDLEADDVK 12 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.024)VVS(0.976)DLEADDVK;S(0.207)VVS(0.793)DLEADDVK;S(0.029)VVS(0.971)DLEADDVK 199.13 0.00011542 210728000 9295.2 10292.9 9270.7 7629.79 6069.07 6923.16 8585.1 6337.78 10242.8 10084.3 TRUE FALSE 8504.594429 9622.830339 8641.430714 8217.437748 5827.32609 7315.143336 8012.403643 6282.369458 11307.57571 11333.61922 0.750386462 0.849051848 0.762459948 0.725049747 0.514162862 0.645437543 0.706958959 0.554312734 0.997702102 1 13.46832102 -8.278598493 24.3578269 0.99885123 0.690886045 0.638980405 0.093304134 462.793181 656938.874 0.097668143 0.02549801 5.27E-09 8.278598493 -0.307965185 SVVS(ph)DLEADDVK ddPTM_A459_MK2206_30min_R2 6 SVVSDLEADDVK 12 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.077)VVS(0.923)DLEADDVK;S(0.002)VVS(0.998)DLEADDVK;SVVS(1)DLEADDVK;SVVS(1)DLEADDVK;SVVS(1)DLEADDVK;S(0.002)VVS(0.998)DLEADDVK 167.32 0.00043406 107605000 402012 353839.7 318215.3 362259.1 308298.6 247908.8 479870 349650.2 213137.8 385889 TRUE FALSE 432790.3478 336268.535 328824.4393 332661.3727 296193.2479 257343.1431 416862.4926 395350.6817 231676.1406 373297.4735 1.159371221 0.900805815 0.880864358 0.891142845 0.793450985 0.689378207 1.116703225 1.059076768 0.620620703 1 18.50996622 -4.760482586 4.857660041 0.882706329 1.178802808 0.243476088 0.146193591 0.27816991 16.38868703 0.036818562 0.284242414 1.74E-05 4.760482586 0.296096479 SVVS(ph)DLEADDVKGSVPLSSSPPAT(ph)HFPDETEITNPVPK ddPTM_A459_MK2206_30min_R2 1 SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK 38 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 2 S(0.036)VVS(0.732)DLEADDVKGS(0.187)VPLS(0.202)S(0.194)S(0.187)PPAT(0.432)HFPDET(0.02)EIT(0.009)NPVPK 43.416 0.028119 2048200 4103.2 8275.6 6367.5 6350.2 7641.5 4237.7 7931.1 5397.6 6390.6 5833.3 TRUE FALSE 4417.344147 7864.645738 6579.789272 5831.368347 7341.456315 4398.968643 6889.737043 6103.084853 6946.442836 5642.959899 0.782806227 1.393709308 1.166017372 1.033388231 1.300993884 0.779549868 1.220943825 1.081539646 1.23099277 1 12.46223638 -5.714368056 24.99665713 1.096885 1.142130785 0 0.19554233 906.3826605 481315.4601 0.050486266 0.087444582 1.93E-06 5.714368056 0.045245785 SVVS(ph)DLEADDVKGSVPLSSSPPATHFPDETEITNPVPK ddPTM_A459_MK2206_30min_R1 1 SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK 38 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.228)VVS(0.713)DLEADDVKGS(0.023)VPLS(0.009)S(0.009)S(0.009)PPAT(0.009)HFPDET(0.001)EITNPVPK 54.338 0.00015265 11024000 1601.5 1068 1390 1125.1 1359.8 1447.4 1228.7 1461.5 914.2 438.4 TRUE FALSE 1465.284015 998.4730059 1295.650673 1211.755397 1305.636287 1529.350537 1146.735665 1448.72226 1009.234361 492.7123018 2.973914006 2.026482802 2.629629234 2.459356896 2.649895856 3.103942264 2.32739402 2.940300566 2.048323855 1 8.944601682 -8.58441511 4.253350271 1.000494931 2.614656892 0.730747422 0.305288103 0.147564965 7.732478672 0.282609657 0.073861176 2.60E-09 8.58441511 1.614161961 SVVS(ph)FDK ddPTM_A459_MK2206_30min_R1 2 SVVSFDK 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 S(0.353)VVS(0.647)FDK;S(0.41)VVS(0.59)FDK 112.11 0.014704 56565000 8296.1 10631.5 11396.6 8137 8191.3 7434 11113.6 8964.2 13811 15469.6 TRUE FALSE 7590.47313 9939.387418 10623.03054 8763.71315 7865.023176 7854.906656 10372.23202 8885.826944 15246.70287 17386.09084 0.436583082 0.571686155 0.611007422 0.504064613 0.452374444 0.45179257 0.596582183 0.511088262 0.876948304 1 14.08564597 -8.357299342 3.113028611 0.996929892 0.51768197 0.893035809 0.058977959 0.074887795 1.324248042 0.058648891 0.015927088 4.39E-09 8.357299342 -0.479247922 SVVS(ph)FDK ddPTM_A459_MK2206_30min_R2 2 SVVSFDK 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 S(0.002)VVS(0.998)FDK;SVVS(1)FDK 91.867 0.027773 16033100 111649 96775 138017 105219 88710 74052 131808 95369 65922 135884 TRUE FALSE 120196.9333 91969.29422 142618.4179 96622.27112 85226.79967 76870.10075 114501.4513 107834.0558 71655.7764 131450.1162 0.91439199 0.699651677 1.084962281 0.735048959 0.648358496 0.584785339 0.871063903 0.820342034 0.545117634 1 17.00415589 -5.939845459 24.99999522 0.73038841 0.884723991 0.171676725 0.154289794 125.6879258 52234.04724 0.042243386 0.062657061 1.15E-06 5.939845459 0.154335581 SVVSDLEADDVKGSVPLS(ph)SSPPATHFPDETEITNPVPK ddPTM_A459_MK2206_30min_R2 2 SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK 38 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.005)VVS(0.018)DLEADDVKGS(0.058)VPLS(0.283)S(0.283)S(0.283)PPAT(0.058)HFPDET(0.009)EIT(0.004)NPVPK;SVVS(0.002)DLEADDVKGS(0.01)VPLS(0.3)S(0.3)S(0.3)PPAT(0.087)HFPDET(0.001)EITNPVPK 59.434 7.90E-05 90398000 35775 133963 78818 134419 140107 107754 143008 90813 101072 82267 TRUE FALSE 38513.96151 127310.5922 81445.75278 123436.5377 134605.6952 111854.654 124230.8778 102682.5709 109863.0599 79582.63453 0.483949316 1.599728295 1.023411116 1.551048648 1.691395315 1.405515847 1.561029973 1.290263529 1.380490361 1 16.28016604 -4.754087411 24.99933163 1.407228563 0.483947692 0.600026028 0.221290726 172.8619142 587743.1858 0.053017025 0.535516992 1.76E-05 4.754087411 -0.923280871 SVVSDLEADDVKGSVPLSSSPPATHFPDETEIT(ph)NPVPK ddPTM_A459_MK2206_30min_R2 1 SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK 38 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.001)VVS(0.004)DLEADDVKGS(0.011)VPLS(0.112)S(0.112)S(0.112)PPAT(0.091)HFPDET(0.091)EIT(0.466)NPVPK 42.571 0.01623 59434000 2125.4 6835.1 4065.1 6764.5 5784.6 7373.1 6884.3 4688 5313 4390.8 TRUE FALSE 2288.122258 6495.678873 4200.628405 6211.818711 5557.467539 7653.688487 5980.38314 5300.737696 5775.115136 4247.528556 0.538694968 1.529284333 0.98895825 1.462454844 1.308400277 1.801915723 1.40796773 1.247958107 1.359641274 1 12.05240793 -4.754197343 24.98069501 1.360543652 0.538693517 0.528959807 0.22789922 197.662174 681757.7026 0.055650005 0.555992393 1.76E-05 4.754197343 -0.821850135 SVWGSLAVQNS(ph)PK ddPTM_A459_MK2206_30min_R1 2 SVWGSLAVQNSPK 13 0 P18615;P18615-3;P18615-4 P18615 NELFE Negative elongation factor E 1 SVWGSLAVQNS(1)PK;SVWGSLAVQNS(1)PK 225.21 1.78E-09 87006000 7561.9 9454.9 9202.8 7879.1 5478.4 4752.2 5729.8 6673.9 7438.2 6567.3 TRUE FALSE 6918.720696 8839.384291 8578.139576 8485.949647 5260.183727 5021.265457 5347.575497 6615.550796 8211.427508 7380.906705 0.937380863 1.197601412 1.162206748 1.149716422 0.712674464 0.680304691 0.724514712 0.896305977 1.11252287 1 12.84958234 -6.249651265 24.74850721 0.834004676 1.121466057 0.436485758 0.141944673 606.8047039 1273952.777 0.044470243 0.056925489 5.63E-07 6.249651265 0.28746138 SVWGSLAVQNS(ph)PK ddPTM_A459_MK2206_30min_R2 2 SVWGSLAVQNSPK 13 0 P18615;P18615-3;P18615-4 P18615 NELFE Negative elongation factor E 1 SVWGSLAVQNS(1)PK;SVWGSLAVQNS(1)PK 178.67 0.00010736 43260000 221280 257440 225814 188575 198931 156480 256120 192843 169463 261280 TRUE FALSE 238221.3669 244655.904 233342.5261 173167.8193 191119.9694 162434.9561 222491.1363 218048.2422 184202.5854 252754.455 0.94250116 0.96795882 0.92319847 0.685122718 0.756148767 0.642659122 0.880265934 0.862688028 0.728780766 1 17.947377 -5.620871201 7.089830283 0.784022825 0.952748758 0.331999121 0.098029136 0.229770469 14.26990164 0.026335763 0.045859635 2.39E-06 5.620871201 0.168725933 SVYATMGDHENRS(ph)PVKEPVEQPR ddPTM_A459_MK2206_30min_R2 2 SVYATMGDHENRSPVKEPVEQPR 23 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 S(0.001)VY(0.004)AT(0.01)MGDHENRS(0.984)PVKEPVEQPR;SVY(0.002)AT(0.006)MGDHENRS(0.992)PVKEPVEQPR 49.528 0.019707 43076000 43073 52914 51540 54827 59076 40025 70766 53283 49344 57966 TRUE FALSE 46370.702 50286.3677 53258.31788 50347.45872 56756.37941 41548.17942 61474.33919 60247.27105 53635.85193 56074.57417 0.82694702 0.896776631 0.949776591 0.897866091 1.012158902 0.740945073 1.09629614 1.074413349 0.956509304 1 15.77505914 -7.290976308 24.99987638 1.038005814 0.896817647 0.459315208 0.07622135 660.8189133 559310.4069 0.031002734 0.020905463 5.12E-08 7.290976308 -0.141188168 SWDSS(ph)SPVDRPEPEAAS(ph)PTTR ddPTM_A459_MK2206_30min_R2 1 SWDSSSPVDRPEPEAASPTTR 21 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 2 S(0.015)WDS(0.326)S(0.353)S(0.34)PVDRPEPEAAS(0.92)PT(0.038)T(0.008)R 78.917 0.0045375 27524000 89078 85276 89642 111960 105850 98136 102550 82118 96848 86375 TRUE FALSE 95897.88017 81041.31784 92630.61954 102812.5099 101693.7971 101870.6342 89085.06182 92851.10455 105271.664 83556.59082 1.147699771 0.969897372 1.108597402 1.230453622 1.217064939 1.219181315 1.066164392 1.111236153 1.259884624 1 16.35046601 -5.523112524 24.99477274 1.164025121 1.05391077 0.172577877 0.086359414 11.18042547 1195345.801 0.022824076 0.040034323 3.00E-06 5.523112524 -0.110114351 SWDSS(ph)SPVDRPEPEAASPTTR ddPTM_A459_MK2206_30min_R1 3 SWDSSSPVDRPEPEAASPTTR 21 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 S(0.002)WDS(0.117)S(0.441)S(0.441)PVDRPEPEAASPTTR;S(0.001)WDS(0.119)S(0.44)S(0.44)PVDRPEPEAASPTTR;S(0.004)WDS(0.313)S(0.341)S(0.341)PVDRPEPEAASPTTR 91.926 0.00034487 321248100 2835.36 3099.76 3095.21 2992.17 3624.6 3007.09 3076.58 2853.21 2854.99 2575.79 TRUE FALSE 2594.197743 2897.965061 2885.115769 3222.627452 3480.224507 3177.348837 2871.346962 2828.264686 3151.776427 2894.898311 0.896127416 1.001059363 0.996620765 1.113209206 1.202192316 1.097568376 0.991864533 0.976982395 1.088734763 1 11.49929696 -4.910876851 1.500559489 1.066539871 0.863144681 0.370872194 0.065988123 1.055226224 2.687994064 0.021371396 0.299203892 1.23E-05 4.910876851 -0.20339519 SWDSSS(ph)PVDRPEPEAASPTTR ddPTM_A459_MK2206_30min_R2 2 SWDSSSPVDRPEPEAASPTTR 21 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 S(0.002)WDS(0.038)S(0.151)S(0.81)PVDRPEPEAASPTTR;SWDS(0.05)S(0.191)S(0.755)PVDRPEPEAAS(0.003)PTTR 107.18 0.00063439 59883000 54741 61176 55281 66013 66341 72468 67644 57493 69220 69315 TRUE FALSE 58932.01305 58138.0888 57124.04095 60619.52673 63736.119 75225.82052 58762.26154 65007.5325 75240.63048 67053.25723 0.878883674 0.86704347 0.851920448 0.904050441 0.950529797 1.121881675 0.876352082 0.969491046 1.122102543 1 16.03301979 -6.314073162 2.816236739 1.00873622 0.869470655 0.485472942 0.068410979 0.252225685 3.960639328 0.022614661 0.027346701 4.85E-07 6.314073162 -0.139265565 SWDSSSPVDRPEPEAAS(ph)PTTR ddPTM_A459_MK2206_30min_R2 2 SWDSSSPVDRPEPEAASPTTR 21 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SWDS(0.004)S(0.004)S(0.003)PVDRPEPEAAS(0.821)PT(0.15)T(0.018)R;SWDSSSPVDRPEPEAAS(0.572)PT(0.397)T(0.031)R 83.221 0.00077211 50306000 70239 106762 87717 124110 110180 102493 109517 89939 100540 100337 TRUE FALSE 75616.55184 101460.3543 90641.441 113969.816 105853.7796 106393.4429 95137.28635 101694.3361 109284.7875 97063.01191 0.779046007 1.045303997 0.933841215 1.174183798 1.090567638 1.096127565 0.980160047 1.047714615 1.12591589 1 16.56663401 -4.192405807 1.36484552 1.064912921 1.15E-16 0.592232393 0.068214041 3.862083612 2.074930258 0.019374021 8.441170327 6.42E-05 4.192405807 -1.064912921 SWGHES(ph)PEER ddPTM_A459_MK2206_30min_R1 2 SWGHESPEER 10 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 SWGHES(1)PEER;SWGHES(1)PEER 99.732 0.01818 28042900 5126.8 3021.7 3114.5 2702.98 8159.5 6718.8 7309.9 4597 2234.15 2664.42 TRUE FALSE 4690.738738 2824.986781 2903.096417 2911.163988 7834.489837 7099.21265 6822.269909 4556.808914 2466.397887 2994.508465 1.566446979 0.943389145 0.969473438 0.97216756 2.616285754 2.370743891 2.278260352 1.521721834 0.823640312 1 11.5481035 -6.217425294 24.9889463 1.850134652 1.090520727 0.236035956 0.565897672 629.6888762 357504.8913 0.176516924 0.227880984 6.06E-07 6.217425294 -0.759613926 SWGHES(ph)PEER ddPTM_A459_MK2206_30min_R2 1 SWGHESPEER 10 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 S(0.002)WGHES(0.998)PEER 75.102 0.040212 7061700 27767 43336 31408 46176 48070 61071 48492 33622 53846 34836 TRUE FALSE 29892.86287 41183.99726 32455.12704 42403.27309 46182.53027 63395.0997 42124.94215 38016.51084 58529.42775 33699.30417 0.887046887 1.222102304 0.963080035 1.258283342 1.370429788 1.881199071 1.250024094 1.128109668 1.736814133 1 15.04043118 -5.999906738 3.062578473 1.415892061 1.044339311 0.285698398 0.258885279 0.330928444 6.3762567 0.077506016 0.114462933 1.00E-06 5.999906738 -0.37155275 SWMDDY(ph)DYVHLQGK ddPTM_A459_MK2206_30min_R1 2 SWMDDYDYVHLQGK 14 0 A0A087WUD2;Q14511-3;Q14511 A0A087WUD2 NEDD9 Enhancer of filamentation 1;Enhancer of filamentation 1 p55 1 S(0.003)WMDDY(0.872)DY(0.125)VHLQGK;SWMDDY(0.977)DY(0.023)VHLQGK 168.82 1.37E-06 0 3519.6 3742.6 3065.7 2725.6 3045.8 2999.4 3581.5 2549.8 3008.3 2951.8 TRUE FALSE 3220.239538 3498.95606 2857.608826 2935.526184 2924.479336 3169.223436 3342.58467 2527.507367 3321.02355 3317.491269 0.970685158 1.054699403 0.861376442 0.884863274 0.881533394 0.955307242 1.007563969 0.761873103 1.001064745 1 11.69587695 -5.258241756 24.98544309 0.91256741 1.012692281 0.19325488 0.075442956 386.3071245 3018469.216 0.018603218 0.045232981 5.52E-06 5.258241756 0.100124871 SWS(ph)LATFR ddPTM_A459_MK2206_30min_R2 1 SWSLATFR 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 SWS(0.952)LAT(0.048)FR 96.665 0.020894 1315800 19367 19888 21469 20142 16394 19231 23591 19777 18516 14035 TRUE FALSE 20849.75241 18900.39084 22184.76574 18496.33417 15750.28919 19962.84918 20493.47336 22361.9218 20126.48821 13577.0391 1.535662692 1.39208488 1.633991446 1.362324586 1.160068044 1.470338933 1.5094214 1.647039656 1.482391563 1 13.72888127 -5.801277291 24.98355046 1.403400843 1.507731066 0.102246912 0.183042841 469.1177136 294195.7397 0.052783697 0.078292234 1.58E-06 5.801277291 0.104330223 SWS(ph)PPPEVSR ddPTM_A459_MK2206_30min_R1 4 SWSPPPEVSR 10 0 Q9NR19;Q9NR19-2;F8WCJ4;C9JXD9;C9IYL0;B4DEH9;C9JY31 Q9NR19 ACSS2 "Acetyl-coenzyme A synthetase, cytoplasmic" 1 SWS(0.999)PPPEVSR;S(0.015)WS(0.985)PPPEVSR;S(0.02)WS(0.98)PPPEVSR;S(0.153)WS(0.745)PPPEVS(0.102)R 152.64 0.00062605 272842000 15570 15338.6 16192.5 13854.4 16850.5 14349.9 15919.7 14049.2 12498.2 11953.1 TRUE FALSE 14245.68974 14340.05435 15093.39821 14921.46829 16179.3089 15162.37894 14857.72586 13926.36933 13797.43262 13433.94027 1.06042527 1.067449614 1.123527268 1.110729093 1.20436064 1.128662078 1.105984213 1.036655594 1.027057761 1 13.7135949 -7.801510546 2.833024502 1.016810449 1.118072984 0.572310285 0.0373109 0.22041999 3.542837353 0.026468218 0.011598513 1.58E-08 7.801510546 0.101262535 SWS(ph)STPTAGGIEGSVK ddPTM_A459_MK2206_30min_R2 1 SWSSTPTAGGIEGSVK 16 0 B5MCH3;Q8N3C7 B5MCH3 CLIP4 CAP-Gly domain-containing linker protein 4 1 S(0.041)WS(0.885)S(0.073)T(0.001)PTAGGIEGSVK 88.108 0.014202 5361800 18999 24069 23840 34540 25366 38215 22825 19954 27084 23776 TRUE FALSE 20453.57805 22873.76846 24634.8137 31717.97151 24370.00339 39669.2986 19828.05008 22562.05631 29439.71736 23000.19107 0.889278615 0.994503411 1.071069959 1.379030784 1.059556563 1.724737785 0.862081972 0.980950821 1.279977078 1 14.48935823 -5.319442575 2.68955753 1.187857168 0.924109237 0.144992612 0.23273562 0.542523059 7.568737298 0.063964226 0.183300669 4.79E-06 5.319442575 -0.263747931 SWS(ph)T(ph)ATSPLGGERPFRY(ph)GPR ddPTM_A459_MK2206_30min_R1 1 SWSTATSPLGGERPFRYGPR 20 2 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 3 S(0.116)WS(0.701)T(0.442)AT(0.388)S(0.353)PLGGERPFRY(1)GPR 62.064 0.019017 7940700 1931.5 2183 2355.5 1814.1 1760.1 1626.4 2008.5 1552.5 2461.3 2817.1 TRUE FALSE 1767.215782 2040.886303 2195.615223 1953.822296 1689.99149 1718.485362 1874.51663 1538.926656 2717.160943 3166.103616 0.558167387 0.644605026 0.693475479 0.617106239 0.533776432 0.542776097 0.592057891 0.486063263 0.858203417 1 11.62849276 -8.446065617 4.188417249 0.997238504 0.588544779 0.859292991 0.057190548 0.073066348 2.305160364 0.059784133 0.015663747 3.58E-09 8.446065617 -0.408693726 SWSTAT(ph)SPLGGERPFR ddPTM_A459_MK2206_30min_R2 1 SWSTATSPLGGERPFR 16 1 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;Q9UPQ0-5;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46;D6RJ93;Q6NVB9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 SWS(0.025)T(0.025)AT(0.931)S(0.018)PLGGERPFR 123.72 0.013931 6355700 10325 12149 11234 13042 10863 10484 10400 9324.6 10499 11246 TRUE FALSE 11115.48994 11545.69833 11608.53595 11976.42688 10436.46404 10882.97597 9034.467507 10543.35724 11412.18404 10879.04394 1.021734079 1.061278766 1.06705479 1.100871266 0.959318125 1.000361431 0.830446826 0.969143731 1.049006154 1 13.40926416 -6.274894352 23.89199026 0.961239028 1.062939302 0.40607902 0.055736182 428.7369895 761305.9795 0.017881136 0.020403683 5.31E-07 6.274894352 0.101700275 SWSTATS(ph)PLGGERPFR ddPTM_A459_MK2206_30min_R1 4 SWSTATSPLGGERPFR 16 1 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;Q9UPQ0-5;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46;D6RJ93;Q6NVB9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 SWSTAT(0.005)S(0.995)PLGGERPFR;SWSTAT(0.041)S(0.959)PLGGERPFR;S(0.026)WS(0.026)T(0.023)AT(0.207)S(0.719)PLGGERPFR;S(0.002)WS(0.002)T(0.007)AT(0.067)S(0.923)PLGGERPFR 177.93 5.40E-06 150027500 12858.6 12900.6 13240.8 10592.3 12714.6 10640.8 11250.9 10850.3 10189.7 9438.7 TRUE FALSE 11764.90855 12060.7686 12342.05139 11408.12078 12208.15056 11243.2729 10500.37299 10755.43697 11248.95578 10608.03741 1.109056095 1.136946272 1.163462279 1.075422374 1.150839696 1.05988247 0.989850674 1.013895083 1.060418185 1 13.37287015 -6.947865901 4.345611049 1.017669752 1.126427151 0.775169696 0.02829739 0.097778668 3.899775108 0.010305767 0.008864089 1.13E-07 6.947865901 0.108757399 SWSTATS(ph)PLGGERPFR ddPTM_A459_MK2206_30min_R2 1 SWSTATSPLGGERPFR 16 1 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;Q9UPQ0-5;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46;D6RJ93;Q6NVB9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 SWSTAT(0.2)S(0.8)PLGGERPFR 112.17 0.011835 20438000 57296 55247 55368 58041 57174 56153 55280 46927 44470 47557 TRUE FALSE 61682.62581 52503.51432 57213.94149 53298.86464 54929.06148 58289.94176 48021.6696 53060.52002 48337.92022 46005.21898 1.340774529 1.141251264 1.243640238 1.158539527 1.193974568 1.267028895 1.04383091 1.15335871 1.050705144 1 15.48950991 -7.846557135 0.451170368 0.990739415 1.242056224 0.580425443 0.065967808 0.710546303 0.370117504 0.070075254 0.0511579 1.42E-08 7.846557135 0.251316809 SWSYNGYYS(ph)DLSTAR ddPTM_A459_MK2206_30min_R1 1 SWSYNGYYSDLSTAR 15 0 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 SWSYNGYYS(0.979)DLS(0.011)T(0.011)AR 152.94 0.00036289 0 358 502.52 572.91 464.5 549.06 683.88 542.96 428.76 594.98 406.3 TRUE FALSE 327.5502201 469.8058567 534.0224654 500.2758705 527.1897775 722.6006946 506.7401291 425.0113965 656.8303002 456.6355114 0.717312193 1.02884214 1.169472045 1.09556935 1.154508934 1.582445247 1.109725627 0.930745389 1.438412659 1 8.834899249 -4.370162762 1.14349386 1.199300414 4.53E-09 0.379728861 0.183048361 3.92077363 2.282329243 0.056254065 7.0741229 4.26E-05 4.370162762 -1.199300409 SWTS(ph)PK ddPTM_A459_MK2206_30min_R1 1 SWTSPK 6 0 O75494-2;O75494 O75494-2 SRSF10 Serine/arginine-rich splicing factor 10 1 SWT(0.026)S(0.974)PK 128.12 0.02463 24782000 5976.3 7753.2 7122.7 6296.1 5209.5 4508.9 4888.2 5215.3 6035.6 5630.6 TRUE FALSE 5467.984302 7248.465271 6639.230969 6781.026713 5001.994584 4764.190021 4562.117097 5169.703182 6663.022219 6328.161237 0.864071584 1.145429928 1.049156417 1.071563517 0.790434124 0.752855347 0.720923018 0.816936072 1.052916 1 12.62757064 -6.258999724 24.87544346 0.834645403 1.041803628 0.339675126 0.118381444 207.945137 2120266.611 0.03586084 0.044128964 5.51E-07 6.258999724 0.207158224 SWVIGS(ph)PEILR ddPTM_A459_MK2206_30min_R1 1 SWVIGSPEILR 11 0 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 SWVIGS(1)PEILR 101.56 0.015157 28673000 4130 3898 4670.8 3952.8 4878.2 3874.6 4891.5 4376.4 4138.8 4050.2 TRUE FALSE 3778.721813 3644.239492 4353.75911 4257.245341 4683.890964 4093.976504 4565.19696 4338.137596 4569.043071 4551.969353 0.83012901 0.800585243 0.956456156 0.935253516 1.028981217 0.899385779 1.002905909 0.953024342 1.003750842 1 12.15227513 -5.299762462 5.227816541 0.970804823 0.81464586 0.74373528 0.036905436 0.080673916 5.824615558 0.009101243 0.020444932 5.01E-06 5.299762462 -0.156158963 SWVIGS(ph)PEILR ddPTM_A459_MK2206_30min_R2 6 SWVIGSPEILR 11 0 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 S(0.006)WVIGS(0.994)PEILR;S(0.005)WVIGS(0.995)PEILR;S(0.001)WVIGS(0.999)PEILR;SWVIGS(1)PEILR;SWVIGS(1)PEILR;SWVIGS(1)PEILR 130.56 0.0023697 10659800 101659.6 119389.1 112088.4 133636.8 125926.6 112184.2 127213.5 101751 109352 115004.4 TRUE FALSE 109442.7371 113460.4109 115825.3713 122718.246 120982.089 116453.4483 110510.2146 115050.2051 118863.2393 111251.8158 0.983738884 1.019852216 1.04110994 1.103067352 1.087461701 1.046755484 0.993334031 1.034142267 1.068416173 1 16.76346936 -4.955802014 2.351732406 1.049461924 0.980107103 0.266416331 0.032522893 0.572201164 5.071113816 0.009438914 0.070688164 1.11E-05 4.955802014 -0.069354822 SYDPPCPGHWT(ph)PEAPGSGTTCPGLPR ddPTM_A459_MK2206_30min_R2 1 SYDPPCPGHWTPEAPGSGTTCPGLPR 26 0 J3QLT7;H3BM67;H3BUP2;H3BUN4;O60936;O60936-3 J3QLT7 NOL3 Nucleolar protein 3 1 S(0.003)Y(0.003)DPPCPGHWT(0.988)PEAPGS(0.002)GT(0.002)T(0.001)CPGLPR 67.097 0.018371 0 10275 10565 10888 16007 13778 10780 11330 9005.4 10177 11812 TRUE FALSE 11061.6619 10040.35746 11251.00049 14699.1769 13237.00649 11190.24045 9842.35739 10182.4367 11062.17706 11426.57541 0.968064491 0.878684742 0.984634511 1.286402651 1.158440392 0.979317079 0.861356709 0.891118847 0.968109575 1 13.48010547 -6.99526928 24.85297092 0.920967708 1.055808002 0.223764732 0.109889682 201.547224 1058824.596 0.044140579 0.038785716 1.01E-07 6.99526928 0.134840294 SYELPDGQVIT(ph)IGNER ddPTM_A459_MK2206_30min_R1 3 SYELPDGQVITIGNER 16 0 P60709;A0A2R8Y793;Q6S8J3;A5A3E0;P63267-2;A0A2R8YEA7;Q9BYX7;P63261;P68133;P68032;P63267;P62736;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;POTEE;POTEF;ACTG2;POTEKP;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2" 1 SYELPDGQVIT(1)IGNER;SYELPDGQVIT(1)IGNER;SYELPDGQVIT(1)IGNER 157.84 0.00017153 52321300 5042.35 5893.1 5193.67 4090.82 6218.8 4955.37 5930.4 4540.37 4309.82 3727.29 TRUE FALSE 4613.471654 5509.458119 4841.138151 4405.895665 5971.092027 5235.938767 5534.793837 4500.674024 4757.841212 4189.054825 1.101315654 1.315203154 1.155663593 1.051763667 1.42540317 1.249909344 1.321251229 1.074388904 1.13577917 1 12.03240905 -7.782712347 24.84743108 1.078812882 1.233056625 0.31682241 0.108395694 300.2368719 350679.8604 0.059545013 0.02864947 1.65E-08 7.782712347 0.154243743 SYELPDGQVIT(ph)IGNER ddPTM_A459_MK2206_30min_R2 1 SYELPDGQVITIGNER 16 0 P60709;A0A2R8Y793;Q6S8J3;A5A3E0;P63267-2;A0A2R8YEA7;Q9BYX7;P63261;P68133;P68032;P63267;P62736;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;POTEE;POTEF;ACTG2;POTEKP;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2" 1 SYELPDGQVIT(1)IGNER 171.29 1.92E-05 9940500 33699 44672 42249 49917 45568 43316 53111 42708 34664 36668 TRUE FALSE 36279.02135 42453.65344 43657.56057 45838.62142 43778.77136 44964.42073 46137.4619 48290.08224 37679.01206 35471.52616 1.022764602 1.196837521 1.230777621 1.292265273 1.23419475 1.267620134 1.300690072 1.361375939 1.062232617 1 15.11437378 -4.723313253 2.482988865 1.239131673 0.953440398 0.216860418 0.105337968 0.857610362 5.78549897 0.025652323 0.559698146 1.89E-05 4.723313253 -0.285691275 SYELPDGQVITIGNER ddPTM_A459_MK2206_30min_R1 7 SYELPDGQVITIGNER 16 0 P60709;A0A2R8Y793;Q6S8J3;A5A3E0;P63267-2;A0A2R8YEA7;Q9BYX7;P63261;P68133;P68032;P63267;P62736;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;POTEE;POTEF;ACTG2;POTEKP;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2" 0 ;;;;;; 324.48 1.05E-116 340336600 17904.3 18322 17950.8 17020.8 17670.6 17164.5 17849.8 17633.4 14827.12 15044.74 FALSE TRUE 16381.44527 17129.23447 16732.34971 18331.74497 16966.74258 18136.33916 16659.07241 17479.23304 16368.45218 16908.59597 0.968823508 1.013048895 0.989576529 1.084167189 1.003438879 1.072610593 0.985242798 1.033748341 0.968055077 1 14.04546925 -4.49895825 1.519554119 1.021074993 0.913367176 0.136463791 0.035491521 4.38379926 5.507597923 0.009523857 0.870949558 3.17E-05 4.49895825 -0.107707817 SYELPDGQVITIGNER ddPTM_A459_MK2206_30min_R2 4 SYELPDGQVITIGNER 16 0 P60709;A0A2R8Y793;Q6S8J3;A5A3E0;P63267-2;A0A2R8YEA7;Q9BYX7;P63261;P68133;P68032;P63267;P62736;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;POTEE;POTEF;ACTG2;POTEKP;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2" 0 ;;; 228.7 5.03E-14 344576000 172024 191036.6 168817 212855 177379 222363.3 188801 143834.1 162368 161198 FALSE TRUE 185194.2897 181550.0002 174445.2745 195464.0656 170414.2092 230825.4912 164011.2019 162633.7107 176490.4751 155938.1225 1.187613951 1.164243851 1.118682666 1.25347197 1.09283225 1.480237722 1.051771044 1.042937469 1.131798128 1 17.25061414 SYES(ph)SEDCSEAAGSPAR ddPTM_A459_MK2206_30min_R1 1 SYESSEDCSEAAGSPAR 17 0 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 S(0.004)YES(0.498)S(0.498)EDCSEAAGSPAR 297.45 5.34E-89 10760000 2232.6 2372.9 2538.1 1825 2266.4 2077.4 2778.5 2242.6 2595 2475.5 TRUE FALSE 2042.705646 2218.423779 2365.820844 1965.561816 2176.124489 2195.020593 2593.151335 2222.993185 2864.759536 2782.183629 0.734209498 0.79736785 0.850346763 0.706481699 0.78216422 0.788956045 0.93205614 0.799010231 1.029680251 1 11.44200193 -7.928910863 0.865398463 1.013055497 0.774522212 0.664494989 0.060358158 0.352971656 0.501048406 0.054054347 0.021898826 1.18E-08 7.928910863 -0.238533285 SYESS(ph)EDCSEAAGSPAR ddPTM_A459_MK2206_30min_R1 1 SYESSEDCSEAAGSPAR 17 0 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 SYES(0.342)S(0.658)EDCSEAAGSPAR 289.87 1.00E-75 6648700 2146 1981.2 1904.7 1668 2112.6 1875.2 2555.4 1830.1 2315.8 2496.6 TRUE FALSE 1963.471431 1852.22352 1775.414271 1796.469649 2028.450668 1981.372203 2384.933929 1814.099629 2556.535697 2805.897656 0.699765876 0.66011799 0.632743773 0.640247746 0.722923968 0.706145571 0.849971817 0.646530933 0.911129346 1 11.45424667 -8.533280444 0.434811684 1.01943291 0.650285408 0.721536235 0.064223842 0.658291945 0.317794017 0.086692263 0.043893113 2.93E-09 8.533280444 -0.369147502 SYESS(ph)EDCSEAAGSPAR ddPTM_A459_MK2206_30min_R2 1 SYESSEDCSEAAGSPAR 17 0 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 SYES(0.315)S(0.685)EDCSEAAGSPAR 171.78 6.54E-07 18031000 49201 39024 45734 55020 46988 43772 52106 47546 39070 56919 TRUE FALSE 52967.86639 37086.12491 47258.74873 50524.69 45143.01502 45437.77413 45264.41961 53760.42545 42468.23798 55061.73769 0.961972299 0.673537132 0.858286547 0.917600717 0.819861794 0.825215041 0.822066675 0.976366306 0.771284012 1 15.74876252 -14.52287874 0.23983212 1.874429627 0.831073219 0.209429324 0.086063366 256.7310703 2.555694366 109.5006734 0.129809338 3.00E-15 14.52287874 -1.043356408 SYESSEDCSEAAGS(ph)PAR ddPTM_A459_MK2206_30min_R1 2 SYESSEDCSEAAGSPAR 17 0 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 SYESSEDCSEAAGS(1)PAR;SYESSEDCSEAAGS(1)PAR 370.7 6.64E-222 62866000 5195.2 5017.3 4557.1 4040 4487.5 4028.8 4975.7 4742.3 3986.2 4582.8 TRUE FALSE 4753.320959 4690.672858 4247.776749 4351.1615 4308.753373 4256.907174 4643.780132 4700.838571 4400.579755 5150.551862 0.92287605 0.910712674 0.824722644 0.844795202 0.836561496 0.826495352 0.901608266 0.912686387 0.854389951 1 12.3305113 -10.64102598 4.969584474 1.000005411 0.869474297 0.532726207 0.036362034 2.37E-06 4.21E-07 0.038346784 0.009300076 2.29E-11 10.64102598 -0.130531114 SYESSEDCSEAAGS(ph)PAR ddPTM_A459_MK2206_30min_R2 2 SYESSEDCSEAAGSPAR 17 0 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 SYESSEDCSEAAGS(1)PAR;SYESSEDCSEAAGS(1)PAR 159.44 3.11E-05 82949000 24489 29840 23135.6 34922 29656.1 31966 27177.9 23896.6 26865.7 29099.5 TRUE FALSE 26363.89667 28358.18899 23906.92936 32068.76089 28491.6525 33182.48853 23609.40908 27019.96767 29202.43002 28149.9857 0.936550979 1.007396213 0.84926968 1.139210557 1.01213737 1.178774614 0.838700571 0.959857243 1.037387029 1 14.78084657 -5.748309251 24.99998749 1.020319684 0.938704742 0.165855598 0.094539504 497.8951794 947992.6257 0.026177091 0.044983641 1.79E-06 5.748309251 -0.081614942 SYESSEDCSEAAGS(ph)PARK ddPTM_A459_MK2206_30min_R1 1 SYESSEDCSEAAGSPARK 18 1 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 SYESSEDCSEAAGS(1)PARK 90.397 0.0029581 16243000 2363.9 2123.2 2197.7 1623.7 2317.8 1940.4 2517.2 1981.7 2015.6 1694.9 TRUE FALSE 2162.837892 1984.979294 2048.526247 1748.757655 2225.477118 2050.263771 2349.282181 1964.374206 2225.128833 1904.877008 1.135421281 1.042051159 1.075411294 0.918042293 1.168304887 1.076323439 1.233298618 1.031234141 1.168122049 1 10.89548213 SYESSEDCSEAAGS(ph)PARK ddPTM_A459_MK2206_30min_R2 1 SYESSEDCSEAAGSPARK 18 1 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 SYESSEDCS(0.002)EAAGS(0.998)PARK 55.209 0.035114 23477000 51032 60220 65014 67172 51203 61987 56172 44576 48800 56343 TRUE FALSE 54939.04916 57229.56237 67181.53431 61683.83273 49192.51295 64345.95872 48796.54893 50402.23625 53044.53579 54504.53252 1.007972119 1.04999639 1.232586194 1.131719324 0.902539856 1.180561611 0.895275065 0.924734768 0.973213297 1 15.73408859 -7.274509841 24.8425673 0.942033677 1.083316741 0.354718514 0.089647075 839.4269327 1595463.674 0.038305696 0.026012874 5.31E-08 7.274509841 0.141283064 SYETLVDFDNHLDDIR ddPTM_A459_MK2206_30min_R1 1 SYETLVDFDNHLDDIR 16 0 M0R1B0;O43402 M0R1B0 EMC8 ER membrane protein complex subunit 8 0 222.75 6.75E-11 1742400 1220.7 1103.7 1285.1 960.17 1022 1120.1 1592 776.01 1116.2 1129.4 FALSE TRUE 1116.873055 1031.848929 1197.870992 1034.12246 981.2915759 1183.519094 1485.800585 769.2254264 1232.232984 1269.318599 0.879899701 0.812915631 0.943711842 0.814706773 0.773085321 0.932405068 1.170549763 0.606014461 0.970783053 1 10.30983852 -6.80546984 24.94014235 0.92598894 0.846904982 0.097213947 0.13704764 394.7650074 223603.6423 0.048314441 0.042609548 1.57E-07 6.80546984 -0.079083958 SYETLVDFDNHLDDIR ddPTM_A459_MK2206_30min_R2 1 SYETLVDFDNHLDDIR 16 0 M0R1B0;O43402 M0R1B0 EMC8 ER membrane protein complex subunit 8 0 213.99 8.19E-39 0 5011.3 8768.4 7076.6 7470.8 5495.3 5708.2 9538.7 6811 6349.3 7169.1 FALSE TRUE 5394.968981 8332.974006 7312.530312 6860.411742 5279.52691 5925.429551 8286.257232 7701.221086 6901.550637 6935.172854 0.777914133 1.20155246 1.05441212 0.989220007 0.761268251 0.854402576 1.194816251 1.110458419 0.995151928 1 12.75971613 -7.257808558 24.99111978 1.084311516 0.951034616 0.193850809 0.133482878 593.5976066 4085780.063 0.055816055 0.041544979 5.52E-08 7.257808558 -0.1332769 SYGSLVQSACS(ph)PVR ddPTM_A459_MK2206_30min_R1 3 SYGSLVQSACSPVR 14 0 Q96S90 Q96S90 LYSMD1 LysM and putative peptidoglycan-binding domain-containing protein 1 1 SYGSLVQS(0.015)ACS(0.985)PVR;SYGSLVQSACS(1)PVR;SYGSLVQS(0.006)ACS(0.994)PVR 127.66 0.0011976 16263700 4266.9 4865.3 4895.6 3493.26 4107.2 4437.2 5151.5 4261.2 3997.4 4399.7 TRUE FALSE 3903.977749 4548.568086 4563.300312 3762.31149 3943.601527 4688.430429 4807.852834 4223.944778 4412.944035 4944.768052 0.789516861 0.919874914 0.92285427 0.760867133 0.797530134 0.948159829 0.972311094 0.854225058 0.892447126 1 12.27168713 -6.771759535 24.99707594 0.926747851 0.843084789 0.36859858 0.061887682 285.7423706 692109.5086 0.023085875 0.020581767 1.69E-07 6.771759535 -0.083663061 SYGSLVQSACS(ph)PVR ddPTM_A459_MK2206_30min_R2 3 SYGSLVQSACSPVR 14 0 Q96S90 Q96S90 LYSMD1 LysM and putative peptidoglycan-binding domain-containing protein 1 1 SYGSLVQS(0.002)ACS(0.998)PVR;SYGSLVQSACS(1)PVR;SYGSLVQS(0.001)ACS(0.999)PVR 140.77 0.00055974 24075900 78023.4 74284.8 62499.6 76429.7 79692.2 77313 91050 67505.3 68534.3 87854 TRUE FALSE 83996.93149 70595.92485 64583.30547 70185.14902 76563.08381 80255.20039 79095.02563 76328.47449 74495.28953 84987.33117 0.988346502 0.830664099 0.759916856 0.825830722 0.900876434 0.944319574 0.930668425 0.898115913 0.876545816 1 16.37496018 -6.413117046 4.492155614 0.923547757 0.843676875 0.261201221 0.061380713 0.329786044 10.81872204 0.020194596 0.022832136 3.86E-07 6.413117046 -0.079870882 SYIEGYVPSQADVAVFEAVS(ph)SPPPADLCHALR ddPTM_A459_MK2206_30min_R2 1 SYIEGYVPSQADVAVFEAVSSPPPADLCHALR 32 0 P24534;C9JZW3;F2Z2G2 P24534 EEF1B2 Elongation factor 1-beta 1 SYIEGYVPSQADVAVFEAVS(0.5)S(0.5)PPPADLCHALR 81.127 4.32E-06 2908600 4009.8 4211.8 3915.9 4928.5 5121.3 5814.8 3923.8 2367.5 4196.3 3971.1 TRUE FALSE 4316.793371 4002.648137 4046.454152 4525.825785 4920.21203 6036.086289 3408.600347 2676.940379 4561.286589 3841.523332 1.12371916 1.041942946 1.053346238 1.178133098 1.280797122 1.571274145 0.887304346 0.696843452 1.187364021 1 11.9074628 SYIEGYVPSQADVAVFEAVSS(ph)PPPADLCHALR ddPTM_A459_MK2206_30min_R1 1 SYIEGYVPSQADVAVFEAVSSPPPADLCHALR 32 0 P24534;C9JZW3;F2Z2G2 P24534 EEF1B2 Elongation factor 1-beta 1 SYIEGYVPSQADVAVFEAVS(0.224)S(0.776)PPPADLCHALR 96.117 7.38E-09 10082000 1363.3 1299.7 1171.1 1239.2 1362.9 1531.5 1436.4 1344.9 1291.7 1400.2 TRUE FALSE 1247.344176 1215.089294 1091.608995 1334.643399 1308.612807 1618.212207 1340.580377 1333.141681 1425.976837 1573.667347 0.792635228 0.772138595 0.693672012 0.848110245 0.831568889 1.028306401 0.851882947 0.847155966 0.906148838 1 10.61991489 -6.175163847 2.156999387 0.910457544 0.757577761 0.545579835 0.064333752 0.25613725 2.339670377 0.021229726 0.029114074 6.68E-07 6.175163847 -0.152879783 SYIEGYVPSQADVAVFEAVSS(ph)PPPADLCHALR ddPTM_A459_MK2206_30min_R2 3 SYIEGYVPSQADVAVFEAVSSPPPADLCHALR 32 0 P24534;C9JZW3;F2Z2G2 P24534 EEF1B2 Elongation factor 1-beta 1 SYIEGYVPSQADVAVFEAVS(0.295)S(0.705)PPPADLCHALR;SYIEGYVPSQADVAVFEAVS(0.118)S(0.882)PPPADLCHALR;SYIEGYVPSQADVAVFEAVS(0.269)S(0.731)PPPADLCHALR 112.02 7.40E-12 9659600 21016.5 25608.3 23591.9 26601.2 27663.7 26808.5 29536.8 23323.6 22862 23175.4 TRUE FALSE 22625.5394 24336.62906 24378.44217 24427.79687 26577.48414 27828.71625 25658.58268 26372.0746 24850.49543 22419.1886 1.009204205 1.085526756 1.087391815 1.089593263 1.185479306 1.241290073 1.144492031 1.176317086 1.108447584 1 14.45244644 -6.077129043 3.789762187 1.156243093 1.065474189 0.243777781 0.062849197 0.292798899 7.991189702 0.018478446 0.025187988 8.37E-07 6.077129043 -0.090768905 SYKYS(ph)PETPPR ddPTM_A459_MK2206_30min_R1 1 SYKYSPETPPR 11 1 Q99666;O14715;J3KQ37;F8W705;Q99666-2 Q99666 RGPD5;RGPD8 RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 SYKYS(0.981)PET(0.019)PPR 133.88 0.008243 3068800 1464.2 1188 1430.2 1158.1 1123.4 1142 1200.6 1149.7 1084.2 969.65 TRUE FALSE 1339.662101 1110.660984 1333.122009 1247.297063 1078.652599 1206.659053 1120.510165 1139.648294 1196.90647 1089.777562 1.229298664 1.019163013 1.223297354 1.1445428 0.989791528 1.107252612 1.028200803 1.045762304 1.098303462 1 10.08981798 -6.18457628 9.030388159 1.049514215 1.149707305 0.409281985 0.064041294 0.442899268 49.23856714 0.017877738 0.023103596 6.54E-07 6.18457628 0.10019309 SYLEGS(ph)SDNQLK ddPTM_A459_MK2206_30min_R1 2 SYLEGSSDNQLK 12 0 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 SYLEGS(0.5)S(0.5)DNQLK;SYLEGS(0.5)S(0.5)DNQLK 157.03 0.00044084 4097200 4041.6 4450.9 4519.2 3794.6 3500 3144.2 4615.6 3480.6 4758.4 4901.9 TRUE FALSE 3697.840697 4161.145601 4212.449295 4086.860749 3360.587589 3322.221887 4307.701746 3450.169481 5253.052708 5509.184379 0.671213821 0.755310644 0.764623038 0.741826824 0.609997299 0.603033345 0.781912793 0.626257762 0.953508241 1 12.42762303 -8.332253992 5.658753634 0.989356142 0.697486411 0.761066358 0.063348572 0.114870823 6.632127255 0.062825158 0.016507857 4.65E-09 8.332253992 -0.291869731 SYLEGS(ph)SDNQLK ddPTM_A459_MK2206_30min_R2 2 SYLEGSSDNQLK 12 0 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 SYLEGS(0.851)S(0.149)DNQLK;SYLEGS(0.5)S(0.5)DNQLK 154.28 0.00044769 4831600 131940 93449 107230 80922 90297 76373 108061 87583 62277 119476 TRUE FALSE 142041.4278 88808.45855 110804.9947 74310.41374 86751.48607 79279.42803 93872.4609 99030.39882 67693.74089 115577.5079 1.228971194 0.768388765 0.958707249 0.642948746 0.750591423 0.685941663 0.812203539 0.856831062 0.585699952 1 16.81850114 -2.591157613 1.365796032 0.767554313 199.9999959 0.515762559 0.126640221 468.8315749 2.668132642 0.034006451 290821.9827 0.002563554 2.591157613 199.2324416 SYLEGS(ph)SDNQLKDSESTPVDDR ddPTM_A459_MK2206_30min_R1 2 SYLEGSSDNQLKDSESTPVDDR 22 1 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 S(0.002)Y(0.001)LEGS(0.85)S(0.147)DNQLKDSESTPVDDR;SYLEGS(0.559)S(0.44)DNQLKDSESTPVDDR 118.23 1.82E-05 21848000 1934.73 2087.71 1973.47 1864.13 1880.47 1375.33 1805.61 2012.74 1490.94 1325.66 TRUE FALSE 1770.171054 1951.7997 1839.516355 2007.705616 1805.566898 1453.199996 1685.161051 1995.142826 1645.928548 1489.892769 1.18811977 1.310026963 1.23466359 1.347550413 1.21187708 0.975372205 1.131061971 1.339118404 1.104729537 1 10.54099279 -6.528737695 24.99585882 1.128237548 1.271575028 0.358412856 0.100210811 195.6080443 834509.1853 0.033817753 0.033911097 2.96E-07 6.528737695 0.14333748 SYLEGS(ph)SDNQLKDSESTPVDDR ddPTM_A459_MK2206_30min_R2 1 SYLEGSSDNQLKDSESTPVDDR 22 1 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 SYLEGS(0.499)S(0.499)DNQLKDSESTPVDDR 74.324 0.0010842 20896000 19687 31176 25021 30705 35355 22403 19847 26804 21396 22663 TRUE FALSE 21194.25186 29627.84517 25855.18765 28196.30328 33966.78506 23255.56186 17241.06506 30307.37483 23256.9854 21923.50817 0.966736331 1.351418986 1.179336238 1.286121868 1.549331649 1.060759149 0.786419077 1.382414466 1.060824081 1 14.42019105 SYLEGSS(ph)DNQLK ddPTM_A459_MK2206_30min_R2 1 SYLEGSSDNQLK 12 0 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 SYLEGS(0.15)S(0.85)DNQLK 138.2 0.0033212 0 31026 25322 29861 31401 28187 23622 29417 24308 22653 28893 TRUE FALSE 33401.37441 24064.5463 30856.55084 28835.43785 27080.23675 24520.95176 25554.51256 27485.13906 24623.31699 27950.22378 1.195030662 0.860978663 1.103982247 1.031671091 0.968873701 0.877307887 0.91428651 0.983360251 0.880970299 1 14.77057221 -6.384367916 3.503600499 0.928711349 1.038769444 0.288336284 0.0858754 0.335766559 7.554009212 0.026400107 0.030240926 4.13E-07 6.384367916 0.110058094 SYLEGSS(ph)DNQLKDSESTPVDDR ddPTM_A459_MK2206_30min_R2 1 SYLEGSSDNQLKDSESTPVDDR 22 1 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 SYLEGS(0.243)S(0.684)DNQLKDS(0.045)ES(0.014)T(0.014)PVDDR 59.163 0.0097529 21282000 18542 25538 22294 19088 21240 18806 28187 20123 18619 26723 TRUE FALSE 19961.58978 24269.82006 23037.27083 17528.44934 20406.01088 19521.67551 24486.01304 22753.14519 20238.44696 25851.0307 0.772177713 0.938833749 0.891154829 0.678056111 0.789369334 0.755160432 0.94719678 0.880163946 0.782887429 1 14.65793418 -10.37452501 6.15651681 1.000000015 0.82896871 0.286241374 0.082265032 1.72E-08 3.24E-09 0.083543398 0.020262249 4.22E-11 10.37452501 -0.171031304 SYLLGNSS(ph)PR ddPTM_A459_MK2206_30min_R1 1 SYLLGNSSPR 10 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 SYLLGNS(0.23)S(0.77)PR 94.82 0.023427 5877100 5541.8 4471.2 4084.4 3314.3 4165.3 3762.7 4173.3 3333.3 3799.9 3513.7 TRUE FALSE 5070.440809 4180.124067 3807.162308 3569.56796 3999.387281 3975.740822 3894.906772 3304.15731 4194.913203 3949.003683 1.283979762 1.058526252 0.964081731 0.903916088 1.012758559 1.006770604 0.986301124 0.836706566 1.062271281 1 11.947273 -4.773208882 2.293562967 0.966838714 1.367418238 0.715268966 0.059467566 0.319624213 1.971242374 0.015352591 0.264598551 1.69E-05 4.773208882 0.400579523 SYLLGNSS(ph)PR ddPTM_A459_MK2206_30min_R2 4 SYLLGNSSPR 10 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 SYLLGNS(0.005)S(0.995)PR;SYLLGNS(0.096)S(0.904)PR;SYLLGNS(0.266)S(0.734)PR;SYLLGNS(0.114)S(0.886)PR 119.74 0.0053049 27847700 269986 302457 235666 284050 256360 248501 258993 209031 217703 222945 TRUE FALSE 290656.3357 287437.4252 243522.9868 260842.2064 246294.0183 257957.8797 224986.908 236352.0694 236638.4134 215670.3229 1.347688137 1.332762994 1.129144629 1.209448768 1.141993089 1.196074992 1.043198271 1.09589519 1.097222883 1 17.71846814 -1.522878745 0.225371374 1.020902918 2.887188216 0.801777869 0.048237333 21.68991569 0.280929342 0.072413765 14.83497708 0.03 1.522878745 1.866285298 SYMNPGDQS(ph)PADSNK ddPTM_A459_MK2206_30min_R1 1 SYMNPGDQSPADSNK 15 0 Q92754-2;Q92754 Q92754-2 TFAP2C Transcription factor AP-2 gamma 1 SYMNPGDQS(0.999)PADS(0.001)NK 151.11 0.00025281 5710900 1779.5 1624 1499.9 1412.8 1860.2 1939 2083 1759.8 1602 1646.4 TRUE FALSE 1628.14418 1518.277305 1398.090967 1521.614101 1786.104295 2048.784504 1944.046871 1744.414254 1768.533633 1850.368462 0.879902687 0.820527012 0.75557436 0.822330326 0.96526953 1.107230558 1.050626895 0.94273886 0.955773766 1 10.85359687 -6.32344558 3.894230652 1.011982235 0.813878901 0.754110656 0.051875724 0.121131494 3.698647298 0.018128753 0.02121731 4.75E-07 6.32344558 -0.198103335 SYMNPGDQS(ph)PADSNK ddPTM_A459_MK2206_30min_R2 2 SYMNPGDQSPADSNK 15 0 Q92754-2;Q92754 Q92754-2 TFAP2C Transcription factor AP-2 gamma 1 SYMNPGDQS(1)PADSNK;SYMNPGDQS(0.781)PADS(0.219)NK 265.6 3.35E-37 16015500 79827 79844 87255 78020 87731 66629 91033 73904 72047 94803 TRUE FALSE 85938.6165 75879.06306 90164.03815 71645.51643 84286.24013 69164.61328 79080.25775 83563.50655 78313.51783 91709.58587 0.937073433 0.827384208 0.98314737 0.781221676 0.919055945 0.754169944 0.862289989 0.911175269 0.853929467 1 16.48478492 -11.1850747 4.258557039 1.00479273 0.868434891 0.253149752 0.066974161 0.002964806 0.000235179 0.063086262 0.014795149 6.53E-12 11.1850747 -0.136357838 SYQNS(ph)PSSDDGIRPLPEYSTEK ddPTM_A459_MK2206_30min_R2 1 SYQNSPSSDDGIRPLPEYSTEK 22 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.001)Y(0.001)QNS(0.333)PS(0.333)S(0.333)DDGIRPLPEYSTEK 97.49 0.00010022 9356400 20920 23841 21816 24009 25398 25419 28033 24817 22215 24430 TRUE FALSE 22521.65128 22657.09061 22543.33455 22047.3879 24400.74691 26386.33786 24352.23343 28060.66711 24147.22054 23632.8511 0.952980713 0.95871169 0.953898218 0.932912741 1.032492728 1.116510985 1.03043993 1.18735852 1.021765019 1 14.52850607 -6.440813815 3.850946467 1.080293199 0.951155883 0.557715196 0.050725182 0.158806185 4.406704957 0.015483009 0.017324706 3.62E-07 6.440813815 -0.129137316 SYQNSPS(ph)SDDGIRPLPEYSTEK ddPTM_A459_MK2206_30min_R1 1 SYQNSPSSDDGIRPLPEYSTEK 22 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.001)Y(0.001)QNS(0.134)PS(0.663)S(0.202)DDGIRPLPEYSTEK 83.723 0.00041105 6899600 1206 1027.4 953.28 864.73 902.5 829.28 811.58 1112.6 943.84 871.41 TRUE FALSE 1103.423367 960.5160733 888.5740096 931.3316544 866.5515139 876.233117 757.440979 1102.872656 1041.955546 979.3668496 1.126670121 0.980752078 0.90729435 0.950952807 0.884807888 0.894693462 0.773398629 1.126107807 1.063907305 1 9.935705553 -7.792799864 24.99973939 1.071255706 0.929777099 0.318021741 0.088411962 244.4880435 194896.1244 0.050042375 0.024043233 1.61E-08 7.792799864 -0.141478606 SYQNSPSS(ph)DDGIRPLPEYSTEK ddPTM_A459_MK2206_30min_R2 1 SYQNSPSSDDGIRPLPEYSTEK 22 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.001)YQNS(0.148)PS(0.148)S(0.611)DDGIRPLPEY(0.031)S(0.051)T(0.01)EK 95.988 0.00011361 6907800 20148 19374 23095 27256 25712 19149 29906 21041 22817 24603 TRUE FALSE 21690.54637 18411.91533 23864.97577 25029.09761 24702.41769 19877.72861 25979.30628 23791.13094 24801.58142 23800.20612 0.911359602 0.773603188 1.00272139 1.051633649 1.037907721 0.835191448 1.091558037 0.999618693 1.042074228 1 14.53868645 -5.278974856 23.69392398 1.007072344 0.842481415 0.463637554 0.071032007 305.3448752 412581.9949 0.018272819 0.038207654 5.26E-06 5.278974856 -0.16459093 SYS(ph)AGEASEVSR ddPTM_A459_MK2206_30min_R1 2 SYSAGEASEVSR 12 0 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 S(0.006)YS(0.994)AGEASEVSR;S(0.141)YS(0.858)AGEAS(0.001)EVSR 169.09 0.00036182 33613000 3337.4 2977 3057.8 2611.5 3295.7 2901.2 3216.9 3541.6 2951.9 2823.2 TRUE FALSE 3053.536605 2783.196759 2850.245056 2812.638182 3164.42529 3065.463437 3002.306471 3510.636165 3258.760568 3172.95933 0.962362352 0.877161183 0.898292338 0.886440036 0.997310385 0.966121251 0.9462165 1.10642331 1.027041392 1 11.63161331 -6.976110572 0.932161092 1.04142755 0.905143247 0.544038905 0.045189619 0.411756961 0.745434741 0.030441808 0.022596169 1.06E-07 6.976110572 -0.136284303 SYS(ph)AGEASEVSR ddPTM_A459_MK2206_30min_R2 2 SYSAGEASEVSR 12 0 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 S(0.018)YS(0.981)AGEASEVSR;S(0.005)YS(0.994)AGEAS(0.001)EVSR 169.58 0.00034175 34158000 40365 60259 50803 72587 67231 74791 70183 56866 62516 46486 TRUE FALSE 43455.37544 57266.62568 52496.74666 66656.40991 64591.17313 77637.22391 60967.8878 64298.58145 67953.52868 44969.16563 0.966337152 1.27346427 1.167394279 1.482269217 1.436343597 1.726454624 1.355770936 1.429837102 1.511113843 1 15.4566485 -5.031254665 1.061977505 1.446556699 0.898650727 0.331092103 0.183911664 1.304062238 1.597914375 0.05813279 0.734716375 9.31E-06 5.031254665 -0.547905971 SYS(ph)AGNASQLEQLSR ddPTM_A459_MK2206_30min_R1 1 SYSAGNASQLEQLSR 15 0 Q14678;Q14678-2 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 1 S(0.411)YS(0.586)AGNAS(0.002)QLEQLSR 156.06 0.00016662 31543000 784.05 680.01 509.04 480.76 772.47 826.46 1224.1 1316.9 1111.7 1084.9 TRUE FALSE 717.3624303 635.7412254 474.4877831 517.7882185 741.7008842 873.253451 1142.442522 1305.386482 1227.265193 1219.305603 0.588336861 0.521396132 0.389145906 0.424658279 0.608297774 0.716189156 0.936961595 1.070598281 1.00652797 1 10.25184405 -7.047107689 1.491246714 1.034142019 0.480758688 0.941449624 0.059076114 0.093053898 0.416434754 0.033433964 0.023822568 8.97E-08 7.047107689 -0.553383331 SYS(ph)AGNASQLEQLSR ddPTM_A459_MK2206_30min_R2 1 SYSAGNASQLEQLSR 15 0 Q14678;Q14678-2 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 1 S(0.005)YS(0.995)AGNASQLEQLSR 172.93 3.58E-05 36173000 14065 17285 16720 14597 16938 23655 28414 27401 22873 23457 TRUE FALSE 15141.82721 16426.65203 17277.43645 13404.37841 16272.92901 24555.2076 24683.20767 30982.40478 24862.4522 22691.60001 0.667287772 0.723908937 0.761402301 0.590719843 0.717134491 1.082127641 1.087768498 1.365368893 1.095667656 1 14.46987072 -6.80141038 3.442145442 1.159029541 0.687081449 0.834311818 0.096832358 0.088512709 2.164231082 0.035266342 0.032075869 1.58E-07 6.80141038 -0.471948092 SYS(ph)CSSPK ddPTM_A459_MK2206_30min_R2 1 SYSCSSPK 8 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(0.088)YS(0.749)CS(0.138)S(0.025)PK 104.79 0.014427 9488000 19010 26624 23197 23611 23664 28266 31751 26663 28180 32964 TRUE FALSE 20465.42022 25301.89087 23970.3764 21681.90577 22734.83246 29341.68244 27582.05556 30147.94565 30631.04546 31888.38738 0.641782853 0.793451565 0.751696099 0.679931083 0.712950209 0.920136917 0.864956112 0.945420829 0.960570539 1 14.96074352 -6.772665128 7.371286708 0.930842146 0.719984102 0.834173605 0.04948105 0.059969515 17.42911387 0.017355301 0.015949981 1.69E-07 6.772665128 -0.210858044 SYS(ph)HDVLPK ddPTM_A459_MK2206_30min_R2 1 SYSHDVLPK 9 0 Q13480-2;B7Z3B9;Q13480 Q13480-2 GAB1 GRB2-associated-binding protein 1 1 S(0.061)YS(0.939)HDVLPK 81.625 0.028708 3954700 60336 68433 59433 76268 58779 52192 66455 54693 54288 56820 TRUE FALSE 64955.37055 65034.71673 61414.46656 70036.66043 56471.04112 54178.20313 57729.37867 61841.56289 59009.87211 54965.96805 1.181737953 1.183181504 1.117318019 1.274182242 1.027381908 0.985668133 1.050274938 1.125088215 1.073571051 1 15.74625104 -6.28141295 24.99066713 1.047349193 1.183554195 0.662235266 0.050782686 546.0385204 683194.5039 0.016396009 0.018616044 5.23E-07 6.28141295 0.136205003 SYS(ph)LSELSVLQAK ddPTM_A459_MK2206_30min_R1 1 SYSLSELSVLQAK 13 0 Q9P0V3-2;Q9P0V3 Q9P0V3-2 SH3BP4 SH3 domain-binding protein 4 1 SYS(0.974)LS(0.025)ELSVLQAK 190.34 0.00016301 45966000 5290 5238.6 5220.6 4758.3 5487.5 5835.7 6502.2 6129.6 5882.9 5482.3 TRUE FALSE 4840.057721 4897.566188 4866.240217 5124.78509 5268.921255 6166.112291 6068.450102 6076.009553 6494.448507 6161.488713 0.785533813 0.794867347 0.789783191 0.83174462 0.855137695 1.000750399 0.984899979 0.986126866 1.054038855 1 12.58906326 -6.624472353 1.714317191 1.009582729 0.79432026 0.949399349 0.022583497 0.071576571 0.432151252 0.008906442 0.009016199 2.37E-07 6.624472353 -0.215262469 SYS(ph)LSELSVLQAK ddPTM_A459_MK2206_30min_R2 1 SYSLSELSVLQAK 13 0 Q9P0V3-2;Q9P0V3 Q9P0V3-2 SH3BP4 SH3 domain-binding protein 4 1 S(0.016)YS(0.651)LS(0.333)ELSVLQAK 196.37 0.00019025 24989000 93311 115520 114760 131700 116580 121030 141940 116350 132180 111410 TRUE FALSE 100454.9619 109783.4448 118586.0411 120939.6887 112002.4834 125635.8815 123303.1075 131557.3445 143676.7775 107774.7008 0.932082958 1.018638363 1.100314269 1.12215286 1.039227969 1.165727026 1.144082113 1.220670004 1.333121562 1 16.71765903 -3.978650463 0.439788569 1.18429028 0.524641657 0.418870852 0.084748491 9.59209076 0.842925022 0.058738764 3.819255054 0.000105039 3.978650463 -0.659648622 SYS(ph)PAHNR ddPTM_A459_MK2206_30min_R1 4 SYSPAHNR 8 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.003)YS(0.997)PAHNR;S(0.006)YS(0.994)PAHNR;S(0.004)YS(0.996)PAHNR;S(0.097)Y(0.001)S(0.903)PAHNR 114.97 0.010073 14700600 9420.6 7988.4 6829.1 6795.3 5340.9 6051 9880.6 9685.8 1102.512 4970.3 TRUE FALSE 8619.3285 7468.353708 6365.559719 7318.675183 5128.160643 6393.602391 9221.483202 9601.118072 1217.122068 5586.058288 1.543007261 1.336963083 1.139544092 1.310168066 0.918028488 1.14456421 1.650803255 1.718764391 0.217885673 1 12.44761491 -1.522879449 0.057436864 0.50827807 2.65632451 0.108148282 0.390707456 1092.697759 4.720079547 37.22597738 198.9711232 0.029999951 1.522879449 2.14804644 SYS(ph)PAHNR ddPTM_A459_MK2206_30min_R2 1 SYSPAHNR 8 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.385)Y(0.001)S(0.614)PAHNR 85.807 0.02299 44884000 26071 30296 30487 31892 27394 30695 31224 29797 32500 27680 TRUE FALSE 28067.01581 28791.54469 31503.42136 29286.32158 26318.37392 31863.11973 27124.25129 33691.57021 35326.79125 26776.80387 1.048183941 1.075242021 1.176519107 1.093719838 0.982879587 1.189952314 1.012975687 1.258237181 1.319305748 1 14.70869615 -7.770232705 24.99999496 1.216578615 1.086797319 0.196543283 0.09788082 257.3032562 731516.845 0.049840158 0.024509099 1.70E-08 7.770232705 -0.129781297 SYS(ph)PDGK ddPTM_A459_MK2206_30min_R1 5 SYSPDGK 7 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.001)YS(0.999)PDGK;S(0.011)YS(0.989)PDGK;S(0.044)YS(0.956)PDGK;S(0.369)YS(0.631)PDGK;S(0.144)YS(0.856)PDGK 131.62 0.0038767 1644227000 88160 86958 63446.2 60850 34089.6 36907.3 76227 71298 905.33 52893.7 TRUE FALSE 80661.52905 81297.01839 59139.64872 65536.67754 32731.73905 38996.95943 71142.03591 70674.6491 999.4422933 59446.57088 1.356874381 1.367564473 0.994837008 1.102446728 0.55060769 0.65600015 1.196739103 1.188876802 0.016812447 1 15.85930597 -5.517721021 1.419801253 0.803518454 1.399066061 0.305804006 0.333472483 0.638591181 2.379426965 0.106868128 0.363977979 3.04E-06 5.517721021 0.595547607 SYS(ph)PDGK ddPTM_A459_MK2206_30min_R2 7 SYSPDGK 7 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.005)YS(0.995)PDGK;S(0.001)YS(0.999)PDGK;SYS(1)PDGK;S(0.141)YS(0.859)PDGK;S(0.027)YS(0.973)PDGK;S(0.351)YS(0.649)PDGK;S(0.351)YS(0.649)PDGK 106.68 0.017017 3579806000 1720210 1449056 1561230 1447480 1564380 1070519 1685710 1808710 1387329 1790010 TRUE FALSE 1851910.6 1377097.986 1613280.629 1329216.254 1502954.581 1111258.351 1464374.252 2045114.607 1507996.369 1731602.12 1.069478132 0.795273908 0.931669354 0.767622214 0.867956076 0.641751553 0.845675941 1.181053421 0.870867707 1 20.72367604 -7.631843411 11.79782159 1.019307463 0.836325418 0.280627598 0.12541419 0.504817784 51.61436613 0.057215291 0.033012165 2.33E-08 7.631843411 -0.182982044 SYS(ph)PDGKESPSDK ddPTM_A459_MK2206_30min_R1 2 SYSPDGKESPSDK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.004)YS(0.803)PDGKES(0.169)PS(0.024)DK;S(0.004)YS(0.621)PDGKES(0.347)PS(0.028)DK 149.3 0.0024836 22462000 3842.6 4232.7 4888.7 4280.1 3519.7 2647.5 3358.7 4187.5 2766.2 2018.11 TRUE FALSE 3515.766692 3957.150461 4556.868665 4609.754044 3379.502896 2797.399162 3134.647251 4150.889129 3053.756389 2268.128703 1.550073718 1.74467633 2.009087341 2.032404086 1.489996089 1.233351158 1.382041172 1.830094176 1.346377031 1 11.14728679 -6.400977314 5.85599506 1.406879422 1.838113573 0.479245731 0.232100254 0.231371923 10.15142765 0.075098721 0.085083671 3.97E-07 6.400977314 0.431234151 SYS(ph)PDGKESPSDK ddPTM_A459_MK2206_30min_R2 2 SYSPDGKESPSDK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.036)YS(0.964)PDGKESPSDK;S(0.215)Y(0.016)S(0.769)PDGKESPSDK 141.59 0.0038962 33951000 30809 48201 45583 43482 57585 37871 50417 39012 44276 42615 TRUE FALSE 33167.76073 45807.40843 47102.71447 39929.38151 55323.92356 39312.20744 43797.18734 44111.00235 48127.04645 41224.47604 0.804564761 1.111170179 1.14259098 0.96858433 1.342016415 0.953613271 1.062407374 1.070019721 1.167438645 1 15.33121354 -4.759311887 24.96287083 1.093523602 0.804564385 0.389810806 0.107416558 55.22998933 647879.8488 0.025203229 0.161742794 1.74E-05 4.759311887 -0.288959218 SYS(ph)PDGKESPSDKK ddPTM_A459_MK2206_30min_R1 2 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.02)YS(0.978)PDGKES(0.001)PS(0.001)DKK;S(0.021)Y(0.001)S(0.949)PDGKES(0.004)PS(0.025)DKK 84.508 0.029144 279169600 6511.6 9903.8 7368.5 8907.8 6221.8 4253.9 4801.8 7829 3900.6 2921 TRUE FALSE 5957.754226 9259.06082 6868.34675 9593.880299 5973.972531 4494.752142 4481.480683 7760.551878 4306.081328 3282.875532 1.814797475 2.820411779 2.092173974 2.922401475 1.819737749 1.369150946 1.365108314 2.363949471 1.311679741 1 11.68074434 -6.469284864 6.833192007 1.56274595 2.416782502 0.488491884 0.445547114 0.216250038 22.8388354 0.133948911 0.150423242 3.39E-07 6.469284864 0.854036552 SYS(ph)PDHR ddPTM_A459_MK2206_30min_R2 1 SYSPDHR 7 0 A0A024RAC6;Q14241 A0A024RAC6 TCEB3 Transcription elongation factor B polypeptide 3 1 SYS(1)PDHR 70.816 0.043568 25349000 32451 46108 30876 48983 44682 44641 56261 70254 32689 35426 TRUE FALSE 34935.47351 43818.34377 31905.39043 44980.93221 42927.56017 46339.84454 48873.86312 79436.43902 35532.23013 34270.05252 1.019416982 1.278619102 0.930999169 1.312543428 1.25262604 1.352196484 1.426139137 2.317954983 1.036830338 1 15.06466078 -6.762716124 1.496637068 1.541598142 1.128889494 0.112498039 0.356415727 0.647118114 3.016879084 0.155459987 0.140754699 1.73E-07 6.762716124 -0.412708648 SYS(ph)PSFQR ddPTM_A459_MK2206_30min_R2 4 SYSPSFQR 8 0 Q9P227;Q9P227-2 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 SYS(0.953)PS(0.046)FQR;SYS(0.839)PS(0.161)FQR;SYS(0.819)PS(0.18)FQR;SYS(0.818)PS(0.182)FQR 119.75 0.0077255 23637200 119999 145191 140205 181533 169109 192092 171693 134609 145089 146847 TRUE FALSE 129186.2157 137981.0261 144879.3647 166701.1732 162468.931 199402.1957 149149.5029 152202.8585 157708.579 142055.3944 0.909407321 0.971318454 1.01987936 1.173494142 1.143701241 1.403693232 1.049939029 1.071433148 1.110190708 1 17.11609409 -5.524184413 2.456360487 1.147144385 0.937494948 0.368111151 0.103678098 0.311507338 3.724821942 0.030637109 0.071124712 2.99E-06 5.524184413 -0.209649436 SYS(ph)PYDYQPCLAGPNQDFHSK ddPTM_A459_MK2206_30min_R2 2 SYSPYDYQPCLAGPNQDFHSK 21 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7 E9PGF5 TNS1 Tensin-1 1 S(0.18)Y(0.023)S(0.698)PY(0.095)DY(0.004)QPCLAGPNQDFHSK;S(0.157)Y(0.003)S(0.771)PY(0.056)DY(0.013)QPCLAGPNQDFHSK 124.73 4.70E-05 19058700 74455 93466 91773 99153 98027 85972 97258 78985 89713 79493 TRUE FALSE 80155.33205 88824.61435 94832.66602 91051.88273 94177.96743 89243.7247 84487.90777 89308.6107 97516.07458 76899.14992 1.042343539 1.155079275 1.233208249 1.184042773 1.224694519 1.160529405 1.098684548 1.161373185 1.268103414 1 16.23068003 -7.004665155 24.84943338 1.143219326 1.173782961 0.034798168 0.078914818 879.5979368 4685295.048 0.028404237 0.024339959 9.89E-08 7.004665155 0.030563635 SYS(ph)SPDITQAIQEEEK ddPTM_A459_MK2206_30min_R1 6 SYSSPDITQAIQEEEK 16 0 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 SYS(0.917)S(0.083)PDITQAIQEEEK;S(0.001)YS(0.499)S(0.499)PDITQAIQEEEK;SYS(0.925)S(0.075)PDITQAIQEEEK;SYS(0.5)S(0.5)PDITQAIQEEEK;S(0.006)YS(0.922)S(0.072)PDITQAIQEEEK;SYS(0.5)S(0.5)PDITQAIQEEEK 356.74 4.58E-175 182738400 14958.46 16554.6 16675.6 14533.25 13099.4 10017.81 13741.07 13506.13 13618.23 13344.25 TRUE FALSE 13686.16443 15476.89253 15543.70673 15652.60343 12577.62316 10585.00974 12824.42829 13388.04733 15033.89374 14997.43643 0.912566924 1.031969203 1.036424245 1.043685266 0.83865154 0.705787939 0.855108028 0.892689053 1.002430903 1 13.8724283 -6.262723209 24.99260573 0.866879368 1.010166457 0.31818771 0.086868464 128.792977 2507237.949 0.027761539 0.033264537 5.46E-07 6.262723209 0.143287089 SYS(ph)SPDITQAIQEEEK ddPTM_A459_MK2206_30min_R2 4 SYSSPDITQAIQEEEK 16 0 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.02)YS(0.781)S(0.199)PDITQAIQEEEK;SYS(0.971)S(0.029)PDITQAIQEEEK;SYS(0.5)S(0.5)PDITQAIQEEEK;S(0.001)YS(0.972)S(0.027)PDITQAIQEEEK 279.12 1.69E-62 74518000 126877.1 116227.2 121961.4 116240.4 119573 92840.5 148856.1 97672.9 116161.4 114272.7 TRUE FALSE 136590.9083 110455.5263 126027.5322 106743.1875 114877.9632 96373.61028 129311.1153 110439.0834 126264.9086 110543.9912 1.235624903 0.999199731 1.140066781 0.965617275 1.039205858 0.871812292 1.16977064 0.999050986 1.142214129 1 16.75426108 -4.754854278 24.96086258 1.036448026 1.235625246 0.320062392 0.087144824 261.148507 989792.4205 0.020556074 0.192815511 1.76E-05 4.754854278 0.19917722 SYS(ph)SPDITQAIQEEEKR ddPTM_A459_MK2206_30min_R1 5 SYSSPDITQAIQEEEKR 17 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.184)YS(0.805)S(0.01)PDITQAIQEEEKR;S(0.053)YS(0.942)S(0.004)PDITQAIQEEEKR;S(0.054)Y(0.002)S(0.728)S(0.216)PDITQAIQEEEKR;S(0.021)YS(0.672)S(0.307)PDITQAIQEEEKR;S(0.209)Y(0.002)S(0.777)S(0.011)PDITQAIQEEEKR 179.78 4.12E-08 1226742400 13584.85 14838.4 15352.6 13339.03 14016.7 12146.1 14629.5 14644 14026.47 12855.8 TRUE FALSE 12429.38717 13872.41746 14310.50829 14366.4044 13458.38516 12833.80169 13653.59275 14515.96905 15484.57175 14448.47356 0.860256076 0.960130314 0.990451222 0.994319873 0.931474533 0.888246197 0.944985136 1.004671462 1.071709872 1 13.81862946 -7.871862025 3.610239667 1.036546635 0.941137807 0.48041249 0.042094239 0.216104365 5.320651638 0.027386878 0.012034511 1.34E-08 7.871862025 -0.095408829 SYS(ph)SPDITQAIQEEEKR ddPTM_A459_MK2206_30min_R2 6 SYSSPDITQAIQEEEKR 17 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.049)YS(0.903)S(0.049)PDITQAIQEEEKR;S(0.021)YS(0.751)S(0.228)PDITQAIQEEEKR;S(0.182)Y(0.001)S(0.784)S(0.033)PDITQAIQEEEKR;S(0.103)YS(0.863)S(0.034)PDITQAIQEEEKR;S(0.424)Y(0.048)S(0.512)S(0.015)PDITQAIQEEEKR;S(0.006)YS(0.497)S(0.497)PDITQAIQEEEKR 159.64 5.40E-05 977784400 304975 343911 322900.5 329940 352266 285511.2 363314 280546.3 296533.5 360817.4 TRUE FALSE 328324.1205 326832.8798 333665.8415 302982.8466 338434.2668 296376.5288 315610.4354 317214.6647 322325.4478 349043.9578 0.940638315 0.936365958 0.955942179 0.86803636 0.969603568 0.849109467 0.904214006 0.908810073 0.923452306 1 18.41304921 -8.63284107 9.226564825 0.999999999 0.916050953 0.33187845 0.035292406 21.71411441 1822.909548 0.033356598 0.008617134 2.33E-09 8.63284107 -0.083949047 SYS(ph)TDDEEDTQQSTGK ddPTM_A459_MK2206_30min_R2 1 SYSTDDEEDTQQSTGK 16 0 Q4KWH8-2;A0A2U3TZV8;Q4KWH8;Q4KWH8-3;Q4KWH8-4 Q4KWH8-2 PLCH1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1" 1 SYS(0.5)T(0.5)DDEEDTQQSTGK 299.31 5.83E-88 4507800 18160 23404 19127 25155 25529 24104 35837 25617 23625 32763 TRUE FALSE 19550.34356 22241.79139 19764.68463 23099.75603 24526.60319 25021.29461 31131.55885 28965.22986 25679.8598 31693.94599 0.616847885 0.70176782 0.623610725 0.728838121 0.77385767 0.789466058 0.982255692 0.913904184 0.810244953 1 14.95191967 -6.626710009 1.045588056 0.922674577 0.650200021 0.789981901 0.059064737 0.231342881 0.543176159 0.030584697 0.031820483 2.36E-07 6.626710009 -0.272474557 SYSCS(ph)SPK ddPTM_A459_MK2206_30min_R1 1 SYSCSSPK 8 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(0.007)YS(0.095)CS(0.875)S(0.022)PK 99.788 0.018368 13077000 2976.5 3384.5 2957.4 2869 3013.2 2708.9 4334.6 4694.9 2386.7 3601.2 TRUE FALSE 2723.333045 3164.168435 2756.659928 3089.970877 2893.177863 2862.275577 4045.446743 4653.852984 2634.806006 4047.343844 0.672869208 0.781788886 0.681103468 0.763456478 0.714833722 0.70719852 0.999531273 1.149853624 0.650996334 1 11.9827597 -7.258358285 24.99999927 0.962583116 0.722951511 0.465963835 0.120248826 229.7581554 1864267.838 0.045205794 0.033479261 5.52E-08 7.258358285 -0.239631604 SYSCSS(ph)PK ddPTM_A459_MK2206_30min_R2 1 SYSCSSPK 8 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 SYSCS(0.012)S(0.988)PK 105.98 0.013925 4888200 66413 53693 66154 57537 64300 36897 56760 49416 38921 59064 TRUE FALSE 71497.63034 51026.6837 68359.54134 52836.04305 61775.25892 38301.14119 49307.34382 55874.84087 42306.27823 57136.74652 1.251342344 0.893062465 1.196419914 0.92472964 1.081182648 0.670341654 0.862970799 0.977914289 0.740439049 1 15.80213127 -6.727536143 24.97371331 0.849742527 1.058579197 0.391743842 0.136122154 194.0937336 142972.3029 0.042338978 0.042336786 1.87E-07 6.727536143 0.20883667 SYSEDDIHR ddPTM_A459_MK2206_30min_R1 2 SYSEDDIHR 9 0 Q9Y5A9;A0A024R7W5;A0A087X0Q1;A0A087WY31;Q9Y5A9-2;Q7Z739;Q9BYJ9 Q9Y5A9 YTHDF2;YTHDF3;YTHDF1 YTH domain-containing family protein 2;YTH domain-containing family protein 3;YTH domain-containing family protein 1 0 ; 182.65 0.00065727 21290000 13615.6 12843.6 14316.6 11344 15091.5 13464.7 16227.5 13907.2 10967.1 10786.2 FALSE TRUE 12457.52172 12007.47931 13344.82908 12217.71685 14490.3736 14227.05968 15144.99308 13785.61082 12107.16929 12122.47589 1.0276384 0.990513771 1.100833625 1.00785656 1.195331196 1.173610062 1.249331673 1.137194328 0.998737337 1 13.56539676 -6.251915908 24.64598359 1.141137493 1.033705315 0.238765382 0.079364502 735.4958768 1903402.504 0.02391284 0.030428981 5.60E-07 6.251915908 -0.107432178 SYSEDDIHR ddPTM_A459_MK2206_30min_R2 2 SYSEDDIHR 9 0 Q9Y5A9;A0A024R7W5;A0A087X0Q1;A0A087WY31;Q9Y5A9-2;Q7Z739;Q9BYJ9 Q9Y5A9 YTHDF2;YTHDF3;YTHDF1 YTH domain-containing family protein 2;YTH domain-containing family protein 3;YTH domain-containing family protein 1 0 ; 204.79 0.0021866 21430000 150146 190750 192458 197978 215718 206709 199527 151706 190750 161995 FALSE TRUE 161641.2932 181277.6324 198874.4537 181802.5641 207247.8274 214575.4558 173328.8652 171534.4951 207341.0902 156709.1164 1.031473452 1.156777835 1.269067545 1.160127555 1.322500134 1.36925956 1.106054767 1.094604443 1.323095267 1 17.25772958 -10.83614998 3.311395583 0.998918874 1.205213927 0.244518583 0.107364755 71582134.11 89982932.61 751141.4837 0.027681569 1.46E-11 10.83614998 0.206295053 SYSEHDDER ddPTM_A459_MK2206_30min_R2 1 SYSEHDDER 9 0 Q9UBU9-2;Q9UBU9;E9PQA4 Q9UBU9-2 NXF1 Nuclear RNA export factor 1 0 179.81 0.0015286 4349500 27477 41702 34852 48356 38781 45956 49412 38429 34415 41987 FALSE TRUE 29580.66025 39631.13932 36013.94829 44405.16012 37258.26308 47704.88778 42924.14505 43451.80225 37408.35449 40616.96763 0.728283325 0.975728658 0.886672501 1.093266256 0.917307846 1.174506384 1.056803291 1.069794344 0.921003134 1 15.30979491 -4.021093865 0.843442157 1.037189107 1.43E-15 0.514508927 0.083748863 5.801835109 1.263700286 0.028339108 7.587508557 9.53E-05 4.021093865 -1.037189107 SYSPY(ph)DMLESIR ddPTM_A459_MK2206_30min_R1 1 SYSPYDMLESIR 12 0 P07355;H0YN42;P07355-2;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 SYS(0.003)PY(0.997)DMLESIR 198.62 0.0017254 2601200 767.23 442.76 589.93 519.46 577.1 665.05 887.42 585.48 654.5 764.62 TRUE FALSE 701.9730596 413.9362435 549.8871952 559.4688992 554.112885 702.7045563 828.221831 580.3612101 722.5376172 859.3468982 0.81686809 0.481687016 0.639889661 0.651039645 0.644806988 0.817719314 0.963780556 0.675351492 0.84079854 1 9.747096821 -6.787091949 4.540234758 0.848762724 0.636156064 0.478139375 0.110965078 0.18183057 8.787903769 0.038208533 0.034960039 1.63E-07 6.787091949 -0.21260666 SYSPY(ph)DYQPCLAGPNQDFHSK ddPTM_A459_MK2206_30min_R1 1 SYSPYDYQPCLAGPNQDFHSK 21 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7 E9PGF5 TNS1 Tensin-1 1 S(0.307)Y(0.013)S(0.307)PY(0.372)DY(0.002)QPCLAGPNQDFHSK 129.2 0.00037104 5530000 1587.4 1808.9 1678.7 1716.1 1851.1 1521.6 1937.7 1571.1 1614.5 1806.5 TRUE FALSE 1452.383294 1691.140281 1564.754521 1848.274319 1777.366767 1607.751677 1808.439569 1557.364038 1782.333053 2030.302858 0.715353026 0.832949761 0.770700053 0.910344145 0.875419527 0.791877759 0.890724042 0.767059964 0.877865608 1 10.98747923 -14.52287875 0.161165942 1.626743347 0.783265335 0.485104221 0.057283927 123.4575133 1.134782799 24.86067602 0.23930036 3.00E-15 14.52287875 -0.843478012 SYSPYDMLES(ph)IRK ddPTM_A459_MK2206_30min_R1 1 SYSPYDMLESIRK 13 1 P07355;H0YN42;P07355-2;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 SYSPYDMLES(1)IRK 70.451 0.031231 9094500 2614.5 3206 3209.8 2527 3173.2 2750.6 4057.3 3407 3117.7 3674.7 TRUE FALSE 2392.123046 2997.288817 2991.927719 2721.629978 3046.804725 2906.336595 3786.64492 3377.212958 3441.796072 4129.949579 0.57921362 0.725744651 0.724446549 0.658998355 0.737734122 0.703722053 0.91687437 0.817737092 0.833374841 1 12.01190845 -7.451142 0.193589189 1.075461233 0.523912628 0.778223356 0.055513064 1.753110027 0.276926019 0.259453815 0.374633934 3.54E-08 7.451142 -0.551548605 SYSPYDMLESIR ddPTM_A459_MK2206_30min_R1 1 SYSPYDMLESIR 12 0 P07355;H0YN42;P07355-2;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 228.84 9.78E-09 22861000 1278.5 1195.7 1000.7 1329.1 1216.5 1145.4 1235.7 1298 1039.4 1097.7 FALSE TRUE 1169.756861 1117.859713 932.7752721 1431.467512 1168.044229 1210.251558 1153.268708 1286.651723 1147.44935 1233.691363 0.948176259 0.906109701 0.756084787 1.160312502 0.946788041 0.981000268 0.934811365 1.04292837 0.930094336 1 10.2687658 -5.747265463 24.99999835 0.99555556 0.873722269 0.366611943 0.077720623 268.5881401 473732.667 0.020595264 0.035451721 1.79E-06 5.747265463 -0.121833291 SYSPYDMLESIR ddPTM_A459_MK2206_30min_R2 2 SYSPYDMLESIR 12 0 P07355;H0YN42;P07355-2;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 161.51 0.0066872 21818000 50127 68287 46514 57321 76038 66587 70072 46685 70012 58598 FALSE TRUE 53964.76166 64895.96688 48064.75354 52637.69094 73052.36606 69121.01494 60871.46223 52786.88979 76101.51721 56685.95206 0.95199533 1.144833323 0.847912963 0.928584403 1.28872081 1.219367629 1.073836815 0.931216428 1.342511053 1 15.79070363 -6.235605456 24.94165012 1.139568975 0.97233744 0.282784726 0.135858388 1069.189061 1032260.396 0.040534664 0.052310543 5.81E-07 6.235605456 -0.167231535 SYSPYDMLESIRK ddPTM_A459_MK2206_30min_R1 2 SYSPYDMLESIRK 13 1 P07355;H0YN42;P07355-2;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 152.4 0.00059487 29339000 5107.9 6010.3 6157.6 5999.7 7064 5319.9 5257.4 6719.6 4076.7 2843.9 FALSE TRUE 4673.446282 5619.028378 5739.639268 6461.797934 6782.625922 5621.108141 4906.688439 6660.851246 4500.487554 3196.223802 1.462177423 1.758020941 1.795756375 2.021697582 2.12207478 1.758671635 1.535151711 2.083975234 1.408063963 1 11.64215272 -8.520955998 4.89312521 1.000676673 1.818402034 0.619322497 0.204978071 0.099405588 8.942913162 0.20406334 0.053114826 3.01E-09 8.520955998 0.817725361 SYSS(ph)PDITQAIQEEEK ddPTM_A459_MK2206_30min_R2 1 SYSSPDITQAIQEEEK 16 0 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.007)YS(0.099)S(0.884)PDIT(0.009)QAIQEEEK 87.669 0.014548 38243000 46630 46068 53080 42682 49901 35650 57855 49122 41372 49408 TRUE FALSE 50200.02865 43780.33011 54849.66071 39194.74407 47941.63601 37006.68573 50258.569 55542.41406 44970.46178 47795.82101 1.050301629 0.915986569 1.147582771 0.820045419 1.00305079 0.774266138 1.051526429 1.162076786 0.940886898 1 15.54459686 SYSSSHS(ph)SPAK ddPTM_A459_MK2206_30min_R2 1 SYSSSHSSPAK 11 0 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 SYSSSHS(0.5)S(0.5)PAK 87.216 0.02141 2087500 17388 26107 20416 37097 40428 36841 38888 50038 46344 27183 TRUE FALSE 18719.23865 24810.56434 21096.65925 34066.05643 38840.59359 38243.01007 33781.95889 56578.13841 50374.91735 26296.02094 0.711865825 0.943510214 0.802275725 1.295483317 1.477052124 1.454326879 1.284679495 2.15158554 1.915685931 1 14.68255689 -6.016649146 0.861063053 1.667719768 0.717373957 0.518691099 0.307946156 0.53650761 0.804314289 0.147974884 0.337289621 9.62E-07 6.016649146 -0.950345812 SYSSSHSS(ph)PAK ddPTM_A459_MK2206_30min_R2 1 SYSSSHSSPAK 11 0 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 SYSSSHS(0.073)S(0.927)PAK 95.183 0.014206 1186100 7814 10911 7280.1 12876 16468 12143 13990 17958 18201 9368 TRUE FALSE 8412.245848 10369.17561 7522.8149 11823.98961 15821.38357 12605.11037 12153.09619 20305.17226 19784.09008 9062.322927 0.928265955 1.144207251 0.830119933 1.304741589 1.745841955 1.390935909 1.341057507 2.240614512 2.183114665 1 13.14566519 -6.208172631 0.93088458 1.764889431 0.930004432 0.383061562 0.370388035 0.60494711 1.107495208 0.181505763 0.310358087 6.19E-07 6.208172631 -0.834884999 SYSSSSSS(ph)PER ddPTM_A459_MK2206_30min_R2 2 SYSSSSSSPER 11 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 SYSSS(0.001)S(0.03)S(0.287)S(0.682)PER;SYSS(0.001)S(0.005)S(0.03)S(0.102)S(0.861)PER 118.77 0.0052142 12862100 55189 77599 67371 93605 95800 99047 82797 64304 72634 75804 TRUE FALSE 59414.31227 73745.5465 69617.11551 85957.17207 92038.41064 102816.303 71925.65444 72708.75359 78951.57403 73330.52169 0.810226232 1.005659646 0.949360702 1.172188198 1.255117358 1.402094252 0.980841985 0.991521019 1.076653653 1 16.16212618 -5.711755046 6.133433165 1.135999953 0.926965246 0.332708045 0.131694635 0.249732437 21.01724372 0.03946244 0.068093472 1.94E-06 5.711755046 -0.209034708 SYST(ph)DDEEDTQQSTGK ddPTM_A459_MK2206_30min_R2 1 SYSTDDEEDTQQSTGK 16 0 Q4KWH8-2;A0A2U3TZV8;Q4KWH8;Q4KWH8-3;Q4KWH8-4 Q4KWH8-2 PLCH1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1" 1 SYS(0.021)T(0.979)DDEEDTQQSTGK 293.38 3.02E-172 0 13943 13616 14320 20269 18311 19031 29312 22832 22105 27075 TRUE FALSE 15010.4868 12939.84924 14797.42165 18612.95786 17592.01813 19755.23804 25463.29919 25816.22079 24027.65294 26191.54497 0.573104291 0.49404681 0.564969408 0.710647573 0.671667829 0.754260127 0.972195387 0.985670025 0.91738204 1 14.67681354 -6.775718069 0.786715614 0.998870923 0.532386543 0.919622645 0.051665505 0.171626257 0.232058843 0.037320434 0.035514518 1.68E-07 6.775718069 -0.46648438 SYSVGAS(ph)GSSSR ddPTM_A459_MK2206_30min_R1 1 SYSVGASGSSSR 12 0 Q8N684-2;Q8N684;Q8N684-3;F5H669 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 SYS(0.002)VGAS(0.954)GS(0.044)S(0.001)SR 87.641 0.028241 2976800 1207.6 1225.3 1078.5 877.25 1290.6 1065.6 1348.8 1066.8 1060.1 1044.9 TRUE FALSE 1104.887279 1145.532747 1005.294425 944.815947 1239.192669 1125.933351 1258.824013 1057.47308 1170.301189 1174.350101 0.940849989 0.97546102 0.856043206 0.804543676 1.055215705 0.958771452 1.071932478 0.900475148 0.99655221 1 10.19764686 -6.273201552 24.99974192 0.994001 0.897299846 0.398952178 0.061776103 854.640035 1816479.226 0.019748618 0.02258051 5.33E-07 6.273201552 -0.096701154 SYVS(ph)EPELATLSGDMAQPSLGLVGPESR ddPTM_A459_MK2206_30min_R1 4 SYVSEPELATLSGDMAQPSLGLVGPESR 28 0 E9PKC0;Q6IQ23;Q6IQ23-2;H0YDE2;A0A1B0GTN9;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 S(0.269)YVS(0.731)EPELATLSGDMAQPSLGLVGPESR;S(0.209)YVS(0.791)EPELATLSGDMAQPSLGLVGPESR;S(0.046)YVS(0.954)EPELATLSGDMAQPSLGLVGPESR;S(0.067)YVS(0.933)EPELATLSGDMAQPSLGLVGPESR 198.36 2.35E-40 23748000 7031.2 6256.8 5319.9 5067.39 6929.5 5784.6 5678.9 5162.1 4935.2 4106.26 TRUE FALSE 6433.159518 5849.481183 4958.80001 5457.681256 6653.483342 6112.119053 5300.070943 5116.968304 5448.231701 4614.974489 1.393975098 1.26750022 1.07450215 1.182602692 1.441716169 1.324410149 1.148450756 1.108774992 1.180555107 1 12.17210696 -8.10209579 0.922021326 1.02792366 1.268849485 0.376763333 0.106502121 0.665287881 1.113443792 0.109152257 0.040642504 7.91E-09 8.10209579 0.240925825 SYVS(ph)EPELATLSGDMAQPSLGLVGPESR ddPTM_A459_MK2206_30min_R2 2 SYVSEPELATLSGDMAQPSLGLVGPESR 28 0 E9PKC0;Q6IQ23;Q6IQ23-2;H0YDE2;A0A1B0GTN9;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 S(0.118)YVS(0.881)EPELATLSGDMAQPSLGLVGPESR;S(0.068)YVS(0.932)EPELATLSGDMAQPSLGLVGPESR 128.26 2.20E-12 3990200 28127 38227 33926 33658 30772 36152 35038 26595 30860 28110 TRUE FALSE 30280.42475 36328.70277 35057.07591 30908.03373 29563.73666 37527.78969 30437.46851 30071.05781 33544.14702 27192.773 1.113546777 1.335969037 1.289205625 1.13662677 1.087190948 1.380064832 1.11932198 1.105847418 1.233568456 1 14.73093566 -14.52287875 0.164601918 0.220006376 1.25340889 0.271279646 0.099419679 177.0700605 1.642754251 44.89413081 0.393636016 3.00E-15 14.52287875 1.033402513 SYVS(ph)SPDPQLEENLK ddPTM_A459_MK2206_30min_R1 1 SYVSSPDPQLEENLK 15 0 E9PP00;Q9C0D7;Q9C0D7-2 E9PP00 ZC3H12C Probable ribonuclease ZC3H12C 1 SYVS(0.5)S(0.5)PDPQLEENLK 191.19 2.84E-05 4114900 1073.9 1285.8 1082.4 727.15 951.75 893.23 1050.8 994.36 976.61 829.63 TRUE FALSE 982.5591657 1202.094186 1008.929704 783.155219 913.8397821 943.8039107 980.7030493 985.6664154 1078.132104 932.4108278 1.053783522 1.289232332 1.082065624 0.839925058 0.980082765 1.012218952 1.051792858 1.057116012 1.15628441 1 9.864821948 -3.217418736 7.70011744 1.052221659 1.163433074 0 0.110689449 0 0 0.027431534 0 0.000606152 3.217418736 0.111211415 SYVTTSTR ddPTM_A459_MK2206_30min_R1 3 SYVTTSTR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 0 ;; 176.09 0.0018634 19668800 7010.5 7256.9 6687.7 6800.1 7925.4 6790.5 7684.2 7239.9 5048.1 5420.5 FALSE TRUE 6414.220161 6784.474491 6233.757557 7323.84488 7609.714536 7174.972242 7171.601039 7176.602318 5572.86806 6092.032463 1.052886734 1.113663549 1.023264008 1.202200567 1.249125736 1.177763298 1.177209918 1.178030873 0.914779771 1 12.57270791 -8.258996553 24.98984294 0.957389873 1.148855374 0.558991851 0.067263363 161.2119071 1649222.894 0.055198132 0.018618763 5.51E-09 8.258996553 0.191465501 T(ph)AAQVLIR ddPTM_A459_MK2206_30min_R2 2 TAAQVLIR 8 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 T(1)AAQVLIR;T(1)AAQVLIR 122.18 0.015276 9833000 7077.3 7484.6 11105.8 13543.9 8876.7 12268.3 11060.7 9440.7 9218 11925.6 TRUE FALSE 7619.14353 7112.925648 11476.06183 12437.32005 8528.156156 12735.17875 9608.416804 10674.6319 10019.76498 11536.46865 0.660439842 0.616560047 0.994763838 1.078087275 0.739234545 1.103906155 0.832873308 0.925294579 0.868529641 1 13.49391406 -5.257582176 24.98925799 0.939552284 0.638499912 0.572435071 0.105178044 216.9466241 1405494.911 0.025870376 0.063260953 5.53E-06 5.257582176 -0.301052373 T(ph)ACNMT(ph)Y(ph)GSFGGVK ddPTM_A459_MK2206_30min_R1 2 TACNMTYGSFGGVK 14 0 F8WCG5;A0A5F9ZGY2;A0A5F9ZHP5;A0A5F9ZH74;A0A5F9ZH37;A0A5F9ZHE7;A0A5F9ZH14;A0A5F9ZGX9;Q3SYG4-5;Q3SYG4-6;Q3SYG4-2;Q3SYG4-4;Q3SYG4-7;Q3SYG4-3;Q3SYG4 F8WCG5 BBS9 Protein PTHB1 3 T(0.993)ACNMT(0.799)Y(0.751)GS(0.457)FGGVK;T(0.994)ACNMT(0.837)Y(0.812)GS(0.358)FGGVK 59.634 0.030689 9571000 2123.21 2204.56 2380.12 1915.47 1286.3 1232.28 1801.21 1403.92 1880.34 2466.87 TRUE FALSE 1942.61984 2061.042743 2218.564086 2062.999831 1235.063947 1302.050629 1681.054567 1391.645675 2075.808072 2772.48448 0.700678346 0.743391986 0.800207937 0.744097883 0.445471907 0.469633153 0.606335069 0.501948951 0.748717653 1 11.43696367 -10.61792291 4.812730404 1.000016103 0.635074576 0.436940464 0.122464199 2.36E-05 4.43E-06 0.132085376 0.032033997 2.41E-11 10.61792291 -0.364941526 T(ph)ACNMT(ph)Y(ph)GSFGGVK ddPTM_A459_MK2206_30min_R2 2 TACNMTYGSFGGVK 14 0 F8WCG5;A0A5F9ZGY2;A0A5F9ZHP5;A0A5F9ZH74;A0A5F9ZH37;A0A5F9ZHE7;A0A5F9ZH14;A0A5F9ZGX9;Q3SYG4-5;Q3SYG4-6;Q3SYG4-2;Q3SYG4-4;Q3SYG4-7;Q3SYG4-3;Q3SYG4 F8WCG5 BBS9 Protein PTHB1 3 T(0.966)ACNMT(0.806)Y(0.778)GS(0.45)FGGVK;T(0.78)ACNMT(0.844)Y(0.821)GS(0.555)FGGVK 54.598 0.036929 10861200 18656.8 18019.6 20033.3 19794.1 15329.8 10765.6 19209.4 16930 12007.3 20610.5 TRUE FALSE 20085.17895 17124.77287 20701.20022 18176.85871 14727.87503 11175.29245 16687.18271 19142.80913 13051.67325 19937.98107 1.007382788 0.858902053 1.038279661 0.911669975 0.738684372 0.560502711 0.836954486 0.96011773 0.654613584 1 14.28323171 -6.119094002 4.799005515 0.781279673 0.959664021 0.276448676 0.129791758 0.303914119 10.64475426 0.03915606 0.051508674 7.60E-07 6.119094002 0.178384348 T(ph)ADGRVSPAGGTLDDKPK ddPTM_A459_MK2206_30min_R1 1 TADGRVSPAGGTLDDKPK 18 2 C9JA69;Q8WY36-2;Q8WY36 C9JA69 BBX HMG box transcription factor BBX 1 T(0.5)ADGRVS(0.5)PAGGTLDDKPK 98.684 0.010438 38579000 2341.9 3042.9 2609.7 2751 1904.8 1571.7 2062.1 2203.9 2262.4 2498.2 TRUE FALSE 2142.709107 2844.806657 2432.560835 2962.882497 1828.927783 1660.688296 1924.541072 2184.631535 2497.584576 2807.695876 0.763155698 1.013217521 0.866390429 1.055271877 0.651398108 0.591477271 0.685452113 0.778086955 0.88954954 1 11.45517096 -6.268664454 24.99772402 0.742145416 0.926693896 0.2420833 0.13343866 707.4641368 2447720.891 0.04096047 0.047405281 5.39E-07 6.268664454 0.18454848 T(ph)ALINSTGEEVAMR ddPTM_A459_MK2206_30min_R2 2 TALINSTGEEVAMR 14 0 P02545;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 T(0.731)ALINS(0.097)T(0.172)GEEVAMR;T(0.909)ALINS(0.072)T(0.019)GEEVAMR 123.68 0.0035951 4715700 26438 34513 29257 37299 38082 31748 37578 29004 30522 30773 TRUE FALSE 28462.11361 32799.13461 30232.41378 34251.55239 36586.70933 32956.19239 32643.96346 32794.92239 33176.74839 29768.87953 0.956102952 1.101792715 1.015571102 1.150582519 1.229025409 1.10706862 1.096580186 1.101651218 1.114477566 1 14.8615173 -3.761440084 1.048903103 1.115135782 2.25E-13 0.327722399 0.061193735 14.7157295 2.573967166 0.01933448 30.22154454 0.000173205 3.761440084 -1.115135782 T(ph)AMPSPGVSQNK ddPTM_A459_MK2206_30min_R2 1 TAMPSPGVSQNK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 T(0.519)AMPS(0.474)PGVS(0.008)QNK 148.13 0.0038972 0 61211 63302 53718 69196 51415 45995 62268 44026 40438 66470 TRUE FALSE 65897.36122 60158.51473 55508.93131 63542.46545 49396.18876 47745.37196 54092.1368 49780.34936 43955.22414 64301.08934 1.024824959 0.935575359 0.8632658 0.988202006 0.76820143 0.742528197 0.841232044 0.774175832 0.68358444 1 15.97255556 -6.26633833 24.86563931 0.78935509 0.94531754 0.414305869 0.087240176 359.3358607 1823881.632 0.0256621 0.030016171 5.42E-07 6.26633833 0.155962449 T(ph)ANSPGSGARPDPVR ddPTM_A459_MK2206_30min_R2 1 TANSPGSGARPDPVR 15 1 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 T(0.503)ANS(0.279)PGS(0.218)GARPDPVR 113.67 0.028021 17449000 11403 12841 11781 13335 14410 15003 16358 13010 13394 15100 TRUE FALSE 12276.02245 12203.33461 12173.77266 12245.48784 13844.191 15573.94968 14210.17495 14710.45167 14558.98591 14607.28824 0.84040393 0.835427796 0.833404015 0.838313563 0.947759144 1.066176653 0.972814031 1.007062463 0.996693272 1 13.83440075 -6.388040789 3.330592048 1.006992483 0.835824439 0.92518371 0.022973364 0.060529601 1.251100077 0.007268431 0.008330263 4.09E-07 6.388040789 -0.171168044 T(ph)ASAPNLDR ddPTM_A459_MK2206_30min_R2 1 TASAPNLDR 9 0 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 T(0.802)AS(0.198)APNLDR 106.16 0.031175 13644000 33955 43023 34547 42946 40459 46127 38186 34652 35074 36061 TRUE FALSE 36554.62091 40886.54038 35698.77974 39437.17442 38870.37637 47882.39531 33172.13233 39181.13538 38124.67312 34884.33252 1.047880761 1.172060275 1.023347077 1.130512513 1.114264587 1.372604601 0.950917788 1.123172856 1.092888135 1 15.09029161 -8.802398504 0.881792876 1.001263672 1.124324222 0.103709642 0.104556097 2.432282174 3.618504413 0.100567497 0.034027036 1.58E-09 8.802398504 0.123060551 T(ph)ASEGDGGAAAGAAAAGAR ddPTM_A459_MK2206_30min_R1 2 TASEGDGGAAAGAAAAGAR 19 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.99)AS(0.01)EGDGGAAAGAAAAGAR;T(0.966)AS(0.034)EGDGGAAAGAAAAGAR 342.97 1.62E-173 56415100 1294.84 1715.35 1820.45 1400.62 1762.03 1993.35 2271.34 1916.04 2393.76 2206.92 TRUE FALSE 1184.707059 1603.680403 1696.882926 1508.495995 1691.844614 2106.211754 2119.823053 1899.288264 2642.599918 2480.329911 0.477640919 0.646559313 0.684135977 0.608183608 0.682104669 0.84916597 0.854653667 0.765740177 1.065422751 1 11.27631631 -6.878614942 0.391299599 1.030402964 0.504271367 0.80400811 0.076061038 0.647244998 0.212161361 0.082051995 0.129615048 1.32E-07 6.878614942 -0.526131596 T(ph)ASEGDGGAAAGAAAAGAR ddPTM_A459_MK2206_30min_R2 2 TASEGDGGAAAGAAAAGAR 19 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.999)AS(0.001)EGDGGAAAGAAAAGAR;T(0.994)AS(0.006)EGDGGAAAGAAAAGAR 289.59 5.13E-85 39147000 147929 172603 161658 204235 192169 197916 203515 180058 199453 218181 TRUE FALSE 159254.558 164031.786 167047.597 187548.3472 184623.4795 205447.8321 176793.236 203592.1988 216801.0614 211061.7718 0.754540041 0.777174306 0.791463066 0.888594583 0.874736708 0.973401437 0.837637411 0.964609541 1.027192464 1 17.68730577 -5.168931351 0.284493275 1.017343945 0.569180473 0.780368158 0.043762419 3.145260921 0.251405341 0.056242944 0.484740293 6.78E-06 5.168931351 -0.448163473 T(ph)ASELLLDR ddPTM_A459_MK2206_30min_R1 1 TASELLLDR 9 0 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 T(0.601)AS(0.399)ELLLDR 138.25 0.0029337 0 1368.5 1454.1 972.31 768.6 1184.4 1227.5 1562.2 1294.3 1567.6 1149.5 TRUE FALSE 1252.101889 1359.437826 906.3123062 827.7977052 1137.22284 1296.999989 1457.988488 1282.984072 1730.55763 1291.908738 0.969187568 1.052270788 0.701529666 0.640755559 0.880265615 1.003940875 1.128553779 0.993091875 1.339535509 1 10.33528844 -6.910123181 2.588861434 1.113754034 0.838242197 0.442783681 0.14154842 0.286369811 3.894274237 0.059801621 0.050661161 1.23E-07 6.910123181 -0.275511837 T(ph)ASELLLDR ddPTM_A459_MK2206_30min_R2 1 TASELLLDR 9 0 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 T(0.533)AS(0.467)ELLLDR 120.63 0.015244 3090300 13160 7760 9101.7 8625.4 9016.1 9547 13372 6745.8 10550 12863 TRUE FALSE 14167.53972 7374.649684 9405.146135 7920.677229 8662.082612 9910.317775 11616.24034 7627.499222 11467.61993 12443.28136 1.138569426 0.592661169 0.755841314 0.636542484 0.696125271 0.796439258 0.933535134 0.612981335 0.921591307 1 13.60307936 -8.488199637 8.799387003 0.999985258 0.763406502 0.199773346 0.155963429 0.43905087 104.7060358 0.143001829 0.036948062 3.25E-09 8.488199637 -0.236578756 T(ph)ASELLLDRR ddPTM_A459_MK2206_30min_R2 2 TASELLLDRR 10 1 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 T(0.997)AS(0.003)ELLLDRR;T(0.992)AS(0.008)ELLLDRR 100.09 0.022217 4543700 24135 19311.4 21687 25147 19472.9 24753 36440 16136.5 33070 24679 TRUE FALSE 25982.79416 18352.42396 22410.03376 23092.40966 18708.2961 25694.99276 31655.38423 18245.59595 35946.36882 23873.72625 1.088342636 0.768728927 0.938690237 0.967272952 0.783635362 1.076287484 1.325950708 0.764254217 1.505687401 1 14.54313614 -6.937383105 7.368964326 1.139370158 0.907487819 0.245436541 0.200263252 0.322379873 31.84044683 0.06586394 0.057983472 1.16E-07 6.937383105 -0.231882339 T(ph)ASFSESRADEVAPAK ddPTM_A459_MK2206_30min_R1 1 TASFSESRADEVAPAK 16 1 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.986)AS(0.007)FS(0.007)ESRADEVAPAK 97.095 0.010806 25121000 2577.4 2875.2 2638.4 3316.1 3569.9 3623.4 3722 4915.2 3274.3 2398.7 TRUE FALSE 2358.178596 2688.023957 2459.312759 3571.506597 3427.703324 3828.553777 3473.712171 4872.226925 3614.675202 2695.869065 0.874737808 0.997089952 0.912252301 1.324807144 1.27146506 1.420155684 1.288531485 1.807293606 1.340820016 1 11.39653471 -5.813880612 4.039751692 1.387735152 0.930799839 0.503132982 0.190420073 0.165655807 5.541006237 0.053982794 0.086287474 1.54E-06 5.813880612 -0.456935313 T(ph)ASGSSVTSLDGTR ddPTM_A459_MK2206_30min_R1 2 TASGSSVTSLDGTR 14 0 E5RJY1;E7ESM1;Q92597-3;Q92597-2;Q92597 E5RJY1 NDRG1 Protein NDRG1 1 T(0.845)AS(0.152)GS(0.003)SVTSLDGTR;T(0.306)AS(0.306)GS(0.306)S(0.079)VT(0.003)S(0.001)LDGTR 206.66 1.73E-05 49792000 3504.6 3452.6 3324.6 3433.7 4072.1 3282.8 3987.7 3563.6 3552.7 3263.2 TRUE FALSE 3206.515367 3227.835112 3098.935415 3698.164169 3909.899634 3468.669299 3721.687809 3532.443821 3922.015878 3667.469852 0.874312672 0.880125875 0.844979111 1.008369344 1.066102734 0.945793541 1.014783477 0.963182784 1.06940644 1 11.84056939 -5.767069678 24.99978497 1.008032414 0.867837875 0.756520701 0.03721526 61.66897754 273825.4735 0.010118484 0.015489071 1.71E-06 5.767069678 -0.140194539 T(ph)ASGSSVTSLDGTR ddPTM_A459_MK2206_30min_R2 1 TASGSSVTSLDGTR 14 0 E5RJY1;E7ESM1;Q92597-3;Q92597-2;Q92597 E5RJY1 NDRG1 Protein NDRG1 1 T(0.661)AS(0.33)GS(0.007)S(0.002)VTSLDGTR 247.73 5.91E-27 190740000 113050 150290 153840 139380 160030 143650 150520 127280 113260 127340 TRUE FALSE 121705.1949 142826.8171 158968.9488 127992.2081 153746.4181 149116.7014 130756.5432 143915.933 123111.1501 123184.9062 0.987987885 1.15945063 1.29049048 1.039025089 1.248094615 1.210511141 1.061465623 1.16829194 0.999401257 1 16.91046597 -8.26570862 24.20335831 0.999700584 1.150166328 0.298162322 0.089364013 296.9925813 1683669.986 0.07498144 0.022060598 5.42E-09 8.26570862 0.150465744 T(ph)ASISSSPSEGTPTVGSYGCTPQSLPK ddPTM_A459_MK2206_30min_R1 1 TASISSSPSEGTPTVGSYGCTPQSLPK 27 0 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 T(0.969)AS(0.027)IS(0.002)S(0.002)SPSEGTPTVGSYGCTPQSLPK 200.62 6.74E-40 29601000 8414.4 9295.1 8757.7 6682.9 6679.9 4724.7 4230.5 4371.3 3821.6 3232.6 TRUE FALSE 7698.711094 8689.987301 8163.251724 7197.618116 6413.825438 4992.208431 3948.291064 4333.082185 4218.868996 3633.078893 2.119059707 2.391907128 2.246923881 1.98113455 1.765396686 1.374098548 1.086761719 1.192674949 1.161237925 1 11.82697698 -6.551246105 1.139762834 1.09821192 2.279879346 0.968730603 0.088598646 0.074157984 0.203943358 0.042084439 0.046692191 2.81E-07 6.551246105 1.181667426 up T(ph)ASISSSPSEGTPTVGSYGCTPQSLPK ddPTM_A459_MK2206_30min_R2 2 TASISSSPSEGTPTVGSYGCTPQSLPK 27 0 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 T(0.794)AS(0.185)IS(0.017)S(0.004)SPSEGTPTVGSYGCTPQSLPK;T(0.855)AS(0.143)IS(0.002)SSPSEGTPTVGSYGCTPQSLPK 175.23 5.41E-23 23277300 246819 297445 287204 261926 219281 166513 171741 110607 101527 121539 TRUE FALSE 265715.6524 282674.3138 296779.238 240525.8079 210670.9261 172849.7689 149191.2004 125063.7147 110357.6349 117573.1924 2.260002021 2.404241206 2.524208385 2.045753824 1.791827898 1.470146089 1.268921915 1.06370944 0.938629229 1 16.84319963 -6.677747403 0.872336837 0.97712277 2.43640551 0.972158796 0.096209417 0.090994005 0.151734255 0.062006782 0.063339224 2.10E-07 6.677747403 1.45928274 up T(ph)ASLPGYGR ddPTM_A459_MK2206_30min_R2 1 TASLPGYGR 9 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(0.994)AS(0.006)LPGYGR 123.86 0.012843 66147000 48327 60302 34687 60970 43803 37756 43673 44729 42430 44700 TRUE FALSE 52026.95228 57307.49037 35843.44727 55988.55597 42083.07413 39192.83104 37938.68264 50575.23388 46120.4847 43241.44266 1.20317337 1.325290898 0.828914233 1.29478927 0.973211612 0.906371958 0.877368568 1.169600984 1.06658062 1 15.40012704 -5.240646955 24.94737113 1.020423352 1.264232169 0.355947016 0.134131165 889.1567013 1066832.996 0.034054575 0.089887721 5.75E-06 5.240646955 0.243808817 T(ph)ASLTSAASVDGNR ddPTM_A459_MK2206_30min_R2 1 TASLTSAASVDGNR 14 0 G3V578;H0YJT9;A0A0A0MS87;Q9UN36-4;Q9UN36-5;Q9UN36-2;Q9UN36-3;Q9UN36-6;Q9UN36 G3V578 NDRG2 Protein NDRG2 1 T(0.34)AS(0.108)LT(0.282)S(0.083)AAS(0.187)VDGNR 159.12 0.000703 24782000 43897 60141 49026 63165 50343 43438 52802 43081 39956 42374 TRUE FALSE 47257.78807 57154.48539 50660.50237 58004.21745 48366.28087 45091.06353 45869.03397 48711.83462 43431.30066 40991.33985 1.152872491 1.394306349 1.235883056 1.415035899 1.179914612 1.100014386 1.118993283 1.188344533 1.059523812 1 15.32303153 -6.48824455 5.706972695 1.109508685 1.302238914 0.574546951 0.083002195 0.139563133 12.89520358 0.024803652 0.027302988 3.25E-07 6.48824455 0.192730229 T(ph)ASNPKVENEDEPVR ddPTM_A459_MK2206_30min_R2 1 TASNPKVENEDEPVR 15 1 Q9UBF8-2 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 T(0.895)AS(0.105)NPKVENEDEPVR 114.06 0.027027 13350000 41138 44445 46751 46114 55324 30938 57958 44746 48010 44020 TRUE FALSE 44287.55691 42237.92593 48309.65501 42346.33869 53151.70178 32115.36727 50348.04498 50594.45584 52185.82302 42583.63101 1.040013636 0.991881738 1.134465377 0.994427617 1.248172139 0.75417165 1.1823333 1.188119816 1.225490213 1 15.37801135 T(ph)ASPLPLRPDAPVEK ddPTM_A459_MK2206_30min_R1 1 TASPLPLRPDAPVEK 15 1 Q9HCK8-2;Q9HCK8;H0YJG4 Q9HCK8-2 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 T(0.548)AS(0.452)PLPLRPDAPVEK 79.337 0.043291 52408000 5656.4 6084 5696 5474.9 5729.8 5113.3 5209.9 4479.1 4974.1 4377.6 TRUE FALSE 5175.293477 5687.930494 5309.37139 5896.577747 5501.569933 5402.810627 4862.357077 4439.939701 5491.175495 4919.930137 1.051903855 1.15609985 1.07915585 1.19850843 1.118221149 1.098147835 0.988297992 0.902439583 1.116108429 1 12.26442211 -7.183057701 3.949733982 0.993285536 1.123216812 0.460765634 0.061097622 0.193157473 5.729530137 0.023796653 0.017808825 6.56E-08 7.183057701 0.129931275 T(ph)ASPPPPPK ddPTM_A459_MK2206_30min_R2 1 TASPPPPPK 9 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.638)AS(0.362)PPPPPK 112.3 0.022863 145390000 74156 85869 73081 77765 80112 70948 89193 66738 60394 73833 TRUE FALSE 79833.44038 81604.87033 75517.48406 71411.35074 76966.40035 73647.97586 77481.85196 75460.88575 65646.96095 71423.83526 1.117742279 1.142543943 1.057314884 0.999825205 1.077601057 1.031140033 1.084817858 1.056522455 0.919118397 1 16.12411798 -1.522878745 0.225529306 0.993270674 1.770237072 0.449893777 0.045545451 51.19632376 0.663342504 0.071035828 14.59128681 0.03 1.522878745 0.776966398 T(ph)ASPPPPPKR ddPTM_A459_MK2206_30min_R1 2 TASPPPPPKR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.847)AS(0.153)PPPPPKR;T(0.76)AS(0.24)PPPPPKR 114.51 0.008701 391640000 18715.7 19154.6 19621.3 16050.8 17267.4 15635 17875.8 16804.8 15884.9 14610.2 TRUE FALSE 17123.83143 17907.63206 18289.46082 17287.0354 16579.60289 16520.24019 16683.338 16657.87741 17536.1922 16420.22188 1.042850186 1.090584049 1.113837618 1.052789391 1.009706386 1.006091167 1.016023908 1.014473344 1.067963169 1 14.003186 -6.02296205 4.798038692 1.019541872 1.083621449 0.588474671 0.023863408 0.133322802 8.049340079 0.007122559 0.009872259 9.49E-07 6.02296205 0.064079577 T(ph)ASPPPPPKR ddPTM_A459_MK2206_30min_R2 1 TASPPPPPKR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.992)AS(0.008)PPPPPKR 118.77 0.007001 416820000 186080 225510 185410 243170 214530 202630 223130 177280 193450 215020 TRUE FALSE 200326.4279 214311.5013 191591.4769 223302.2331 206106.4743 210341.2266 193832.763 200451.1047 210275.9313 208003.915 0.963089699 1.030324363 0.921095533 1.073548222 0.99087786 1.011236864 0.931870744 0.963689095 1.01092295 1 17.66625116 -9.314045059 13.63450888 0.999998428 0.988606137 0.006196917 0.043611298 0 0 0.04083346 0.009903569 4.85E-10 9.314045059 -0.011392291 T(ph)ASTDLK ddPTM_A459_MK2206_30min_R2 4 TASTDLK 7 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 T(0.996)AS(0.004)TDLK;T(0.963)AS(0.037)TDLK;T(0.762)AS(0.237)T(0.001)DLK;T(0.997)AS(0.003)TDLK 129.42 0.010872 269683000 1874080 1689010 1872240 1404700 1924080 1108545 1782800 1892100 1886250 2382980 TRUE FALSE 2017561.006 1605136.219 1934659.547 1289931.517 1848530.951 1150731.457 1548716.218 2139403.967 2050312.615 2305223.558 0.875212731 0.696303929 0.839250293 0.559568946 0.801887932 0.499184321 0.671829078 0.928067891 0.889420294 1 21.13647524 -7.766416493 24.8866382 0.931558167 0.700996419 0.470815537 0.113012936 106.2491953 531254.6898 0.058788208 0.029636739 1.71E-08 7.766416493 -0.230561748 T(ph)AVPSPVEAAAASDPAAAR ddPTM_A459_MK2206_30min_R2 3 TAVPSPVEAAAASDPAAAR 19 0 Q147X3;Q147X3-2;J3KNC2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 T(0.885)AVPS(0.115)PVEAAAASDPAAAR;T(0.822)AVPS(0.178)PVEAAAASDPAAAR;T(0.672)AVPS(0.327)PVEAAAASDPAAAR 173.34 3.53E-09 31626500 131901 145184 127675 157447 146469 154990 152036 119866 133478 149189 TRUE FALSE 141999.442 137974.3737 131931.6208 144583.0765 140717.8911 160888.2531 132073.4906 135532.8978 145087.6752 144320.9751 0.983914097 0.9560244 0.914154167 1.0018161 0.975034232 1.114794664 0.915137182 0.939107414 1.005312464 1 17.13892147 -5.790919778 24.99574433 0.991569995 0.951830182 0.118961915 0.051849212 477.9284184 405222.4308 0.015165998 0.022498306 1.62E-06 5.790919778 -0.039739812 T(ph)CNSPQNSTDSVSDIVPDSPFPGALGSDTR ddPTM_A459_MK2206_30min_R2 3 TCNSPQNSTDSVSDIVPDSPFPGALGSDTR 30 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 T(0.513)CNS(0.454)PQNS(0.028)T(0.004)DS(0.001)VS(0.001)DIVPDSPFPGALGSDTR;T(0.474)CNS(0.414)PQNS(0.085)T(0.018)DS(0.007)VS(0.003)DIVPDSPFPGALGSDTR;T(0.477)CNS(0.41)PQNS(0.107)T(0.005)DSVSDIVPDSPFPGALGSDTR 99.048 9.17E-06 4526400 5424.98 7184.8 5929.1 6554.3 8435 7255.59 4501.33 5023.08 5292.61 5554.26 TRUE FALSE 5840.32064 6828.01328 6126.773235 6018.792724 8103.799518 7531.706562 3910.299964 5679.613803 5752.951651 5373.024951 1.08697069 1.270795007 1.140283786 1.120187004 1.508237835 1.401762812 0.727765086 1.057060753 1.07071002 1 12.39151882 -7.24952148 24.99833687 0.968639016 1.255646135 0.476691106 0.149242057 718.0054862 1506051.067 0.060577024 0.046552984 5.63E-08 7.24952148 0.287007119 T(ph)CSFGGFDLTNR ddPTM_A459_MK2206_30min_R1 1 TCSFGGFDLTNR 12 0 O94885;A0A1B0GWB9 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 T(0.923)CS(0.077)FGGFDLTNR 184.98 0.00024434 16133000 2129 2175.7 2115.6 1677.6 2325.2 1719.2 2191.4 2241 2015.9 1711.4 TRUE FALSE 1947.91737 2034.061535 1971.998966 1806.809043 2232.58236 1816.539618 2045.215704 2221.407173 2225.460019 1923.421152 1.012735754 1.057522702 1.025255942 0.939372555 1.160735057 0.944431549 1.063321832 1.154924999 1.157032102 1 10.90945897 -7.533330564 13.34832885 1.115431976 1.025450424 0.20281788 0.070767605 1.198119052 1516.537147 0.0313005 0.018293845 2.93E-08 7.533330564 -0.089981552 T(ph)CSLPDLSK ddPTM_A459_MK2206_30min_R1 1 TCSLPDLSK 9 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 T(0.953)CS(0.047)LPDLSK 138.76 0.0057026 21172000 6444.9 6431 6284.5 6111.2 5746.3 4571.8 5450.2 5793.5 5521.7 4723.9 TRUE FALSE 5896.727411 6012.340731 5857.92565 6581.885683 5517.412703 4830.651365 5086.627102 5742.84804 6095.700475 5309.132396 1.110676279 1.13245259 1.103367785 1.239729054 1.039230573 0.909875853 0.958090084 1.081692377 1.148153789 1 12.3742604 -6.495724276 23.58114688 1.015684746 1.14209112 0.430697878 0.069839952 375.1338719 325769.1596 0.02342177 0.026468803 3.19E-07 6.495724276 0.126406374 T(ph)DSSPNQAR ddPTM_A459_MK2206_30min_R2 1 TDSSPNQAR 9 0 A6NLN1;P26599;P26599-2;P26599-3;K7ES59;A0A087WU68 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 1 T(0.582)DS(0.126)S(0.292)PNQAR 105.4 0.032204 41290000 115420 38144 51513 64279 96139 72249 99763 494420 206930 140980 TRUE FALSE 124256.6439 36249.82443 53230.41771 59027.20008 92364.0998 74998.48632 86663.99826 559042.3916 224928.3974 136379.8341 0.911107164 0.265800473 0.390310034 0.432814723 0.677256285 0.549923578 0.635460505 4.099157292 1.649279006 1 17.05727081 -7.620885158 12.37169647 2.404744358 0.526417586 0.513094071 0.753770451 0.347605598 41.71968904 0.326729268 0.188550216 2.39E-08 7.620885158 -1.878326773 T(ph)DSYSAGQSVEILDGVELGEPAHKK ddPTM_A459_MK2206_30min_R1 2 TDSYSAGQSVEILDGVELGEPAHKK 25 1 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 T(0.457)DS(0.357)Y(0.081)S(0.102)AGQS(0.003)VEILDGVELGEPAHKK;T(0.422)DS(0.422)Y(0.068)S(0.087)AGQS(0.001)VEILDGVELGEPAHKK 111.66 8.78E-08 11571100 4784 4913.9 5498.7 4488.1 4470.8 4857.9 5150.2 5526 6090.8 5640 TRUE FALSE 4377.095678 4594.004217 5125.463564 4833.77424 4292.718569 5132.9501 4806.639555 5477.686765 6723.960456 6338.72578 0.690532424 0.724752005 0.808595251 0.762578223 0.677221056 0.80977633 0.758297444 0.864162129 1.060774782 1 12.62997714 -8.032652019 2.515187813 1.03172495 0.748152672 0.865114282 0.044330641 0.101146415 1.191238055 0.036295664 0.012275026 9.28E-09 8.032652019 -0.283572278 T(ph)EKY(ph)VMTRNWR ddPTM_A459_MK2206_30min_R1 1 TEKYVMTRNWR 11 2 H7C2V4;H7C140;H7C266;O15547 H7C2V4 P2RX6 P2X purinoceptor 6 2 T(1)EKY(1)VMTRNWR 64.103 0.044268 0 387.05 294.27 300.49 376.61 405.04 291.84 396.96 346.3 326.82 234.63 TRUE FALSE 354.129365 275.1129695 280.093576 405.6165675 388.9063991 308.3637286 370.4795227 343.2723356 360.7941085 263.6977358 1.342936692 1.043289085 1.062176644 1.538187525 1.474818879 1.169383301 1.404940098 1.301764441 1.36821087 1 8.042741373 -5.736445429 24.99998518 1.33845102 1.138849607 0.18647464 0.162769302 328.9462437 329023.0407 0.042731996 0.073975646 1.83E-06 5.736445429 -0.199601413 T(ph)ESGEETDLISPPQEEVK ddPTM_A459_MK2206_30min_R1 2 TESGEETDLISPPQEEVK 18 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 T(0.877)ES(0.123)GEET(0.001)DLISPPQEEVK;T(0.5)ES(0.5)GEETDLISPPQEEVK 166.77 3.45E-06 5413100 2721.69 3590.89 3357.7 2991.86 3104.36 2356.66 3447.92 3919.35 4615.19 4941.63 TRUE FALSE 2490.195973 3357.122408 3129.788679 3222.293576 2980.706768 2490.092053 3217.915548 3885.083536 5094.955516 5553.836432 0.448374021 0.604469082 0.563536344 0.58019238 0.536693294 0.44835531 0.579404091 0.699531501 0.917375868 1 12.43926897 -8.148914918 1.77038306 0.998000358 0.536426763 0.923354761 0.048627058 0.091552272 0.513462854 0.045992594 0.014178053 7.10E-09 8.148914918 -0.461573594 T(ph)ESGEETDLISPPQEEVK ddPTM_A459_MK2206_30min_R2 3 TESGEETDLISPPQEEVK 18 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 T(0.559)ES(0.44)GEET(0.001)DLISPPQEEVK;T(0.495)ES(0.495)GEET(0.009)DLISPPQEEVK;T(0.91)ES(0.09)GEETDLISPPQEEVK 236.27 1.91E-24 16141700 61957 45065 54615 39227.2 47368 34077.5 67318 45669 50689 60766 TRUE FALSE 66700.47556 42827.13763 56435.83684 36022.21228 45508.09431 35374.34314 58479.06574 51638.09511 55097.8376 58783.2104 1.134685825 0.728560712 0.960067279 0.612797634 0.774168236 0.601776305 0.994825994 0.878449727 0.93730569 1 15.84311653 -7.332765668 24.99992077 0.942516283 0.795984069 0.190927965 0.151033299 279.6890926 98029.59576 0.062374788 0.042053077 4.65E-08 7.332765668 -0.146532215 T(ph)ESLEAGDDESK ddPTM_A459_MK2206_30min_R2 1 TESLEAGDDESK 12 0 Q5T200-2 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.64)ES(0.36)LEAGDDESK 107.65 0.019629 4565300 18228 19191 19067 11873 13488 10789 16626 13500 10650 21584 TRUE FALSE 19623.54969 18238.00285 19702.68426 10902.93792 12958.39335 11199.58296 14442.98623 15264.49635 11576.31775 20879.71585 0.939837967 0.873479456 0.943627988 0.522178463 0.620621154 0.536385794 0.691723313 0.731068203 0.554428893 1 14.34981446 -5.748262355 24.99686171 0.647875662 0.914431665 0.433787265 0.131801027 196.3739248 372518.8782 0.033680602 0.057893957 1.79E-06 5.748262355 0.266556002 T(ph)ESPATAAETASEELDNR ddPTM_A459_MK2206_30min_R1 1 TESPATAAETASEELDNR 18 0 C9JR83;Q9NTJ3-2;Q9NTJ3;C9JWF0;C9IYK2;C9JJ64 C9JR83 SMC4 Structural maintenance of chromosomes protein 4 1 T(0.699)ES(0.287)PAT(0.012)AAET(0.001)ASEELDNR 93.738 0.010525 13595000 1037.8 1315.7 1271.6 1006.6 1047.1 1102.6 1125.8 940.03 1042.9 974.23 TRUE FALSE 949.5296603 1230.047691 1185.287335 1084.128506 1005.39179 1165.028259 1050.699936 931.8114168 1151.313187 1094.924967 0.867209798 1.123408204 1.082528365 0.990139543 0.918228938 1.064025658 0.959609076 0.851027645 1.05149962 1 10.09661629 -5.985988384 22.93609843 0.968918346 1.034626338 0.060254838 0.084611202 203.2270555 332660.4395 0.0234616 0.034770972 1.03E-06 5.985988384 0.065707991 T(ph)ESPATAAETASEELDNR ddPTM_A459_MK2206_30min_R2 1 TESPATAAETASEELDNR 18 0 C9JR83;Q9NTJ3-2;Q9NTJ3;C9JWF0;C9IYK2;C9JJ64 C9JR83 SMC4 Structural maintenance of chromosomes protein 4 1 T(0.719)ES(0.151)PAT(0.019)AAET(0.075)AS(0.035)EELDNR 81.606 0.024063 5113100 7702.5 9192 8967.4 10422 10200 7176 11871 6848 7679 9508.1 TRUE FALSE 8292.209322 8735.538646 9266.36864 9570.489262 9799.496749 7449.087708 10312.32344 7743.057113 8346.90554 9197.851476 0.901537641 0.949736867 1.007449258 1.040513569 1.065411501 0.80987258 1.121166554 0.84183324 0.907484271 1 13.16708119 T(ph)ESPQGLPTVQR ddPTM_A459_MK2206_30min_R2 1 TESPQGLPTVQR 12 0 F5H212;P15822;A0A0D9SFF3;P15822-2;P15822-3 F5H212 HIVEP1 Zinc finger protein 40 1 T(0.782)ES(0.218)PQGLPTVQR 125.84 0.0065943 9316400 39886 55648 40409 45170 50818 45560 48386 47176 41091 39838 TRUE FALSE 42939.70283 52884.60124 41756.21589 41479.46651 48822.62998 47293.81773 42032.86008 53342.06518 44665.0209 38538.08932 1.114214627 1.372268376 1.083505089 1.076323898 1.266866906 1.227196744 1.09068355 1.384138812 1.158983792 1 15.23399743 -8.546864916 23.129699 0.999999995 1.203298783 0.238328624 0.108146746 3552.41284 3425563.375 0.10180151 0.026285037 2.84E-09 8.546864916 0.203298788 T(ph)ESSTEGKEQEEK ddPTM_A459_MK2206_30min_R2 1 TESSTEGKEQEEK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 T(0.892)ES(0.063)S(0.042)T(0.003)EGKEQEEK 182.33 0.0012172 2565900 35342 32075 31918 27052 29856 20035 35216 29109 23259 38172 TRUE FALSE 38047.81069 30482.20214 32982.13019 24841.76506 28683.70343 20797.44596 30592.0969 32913.64625 25282.02578 36926.45077 1.03036739 0.825484213 0.893184411 0.672736333 0.776779323 0.563212698 0.828460257 0.891329807 0.684658971 1 15.17236698 -4.241983179 1.127653392 0.769366879 1.557095239 0.264092263 0.119760794 6.180766942 2.821994661 0.03577237 7.756626342 5.73E-05 4.241983179 0.78772836 T(ph)ETQEKNTLPTK ddPTM_A459_MK2206_30min_R2 2 TETQEKNTLPTK 12 1 P63313;CON__P21752 P63313 TMSB10 Thymosin beta-10 1 T(0.704)ET(0.296)QEKNTLPTK;T(0.567)ET(0.373)QEKNT(0.001)LPT(0.059)K 147.39 0.0065388 7184500 25428 51609 38796 37782 34668 22685.9 31610 22986 43583 35255 TRUE FALSE 27374.78723 49046.17211 40089.43928 34695.08974 33306.76013 23549.22782 27459.56903 25990.34912 47373.77056 34104.63224 0.802670647 1.438108811 1.1754837 1.017313117 0.976605169 0.690499392 0.805156579 0.762076804 1.389071438 1 15.05768009 -6.023676876 2.543639936 0.906249908 1.166266045 0.121095099 0.23039103 0.478870944 6.198508675 0.071106048 0.105894409 9.47E-07 6.023676876 0.260016138 T(ph)FCGTPDYIAPEIIAYQPYGK ddPTM_A459_MK2206_30min_R1 1 TFCGTPDYIAPEIIAYQPYGK 21 0 P17252;P05129-2;P05771;P05129;P05771-2 P17252;P05771-2 PRKCA;PRKCG;PRKCB Protein kinase C alpha type;Protein kinase C gamma type;Protein kinase C beta type 1 T(0.943)FCGT(0.057)PDYIAPEIIAYQPYGK 130.45 7.16E-05 15453000 5882.7 5284.2 5510.3 7374.4 6483 4301.9 6367.1 5486.5 5365.8 3812.5 TRUE FALSE 5382.345474 4940.19762 5136.276189 7942.377566 6224.768382 4545.46986 5942.362376 5438.532109 5923.594112 4284.821283 1.25614235 1.152953016 1.198714217 1.853607663 1.452748661 1.060830677 1.386840193 1.269255297 1.382460019 1 12.06501932 -6.71639844 24.99907063 1.247139256 1.385987364 0.119030356 0.215283054 370.1401132 205437.5098 0.075880655 0.075880298 1.92E-07 6.71639844 0.138848108 T(ph)FCGTPDYIAPEIIAYQPYGK ddPTM_A459_MK2206_30min_R2 1 TFCGTPDYIAPEIIAYQPYGK 21 0 P17252;P05129-2;P05771;P05129;P05771-2 P17252;P05771-2 PRKCA;PRKCG;PRKCB Protein kinase C alpha type;Protein kinase C gamma type;Protein kinase C beta type 1 T(0.759)FCGT(0.241)PDYIAPEIIAYQPYGK 125.31 9.39E-05 2461700 43878 45427 42699 31812 48823 44475 35506 32675 43397 34575 TRUE FALSE 47237.33342 43171.16124 44122.56335 29212.85784 46905.9637 46167.52729 30844.01955 36945.73469 47171.59262 33446.82058 1.412311622 1.29074036 1.319185578 0.873412101 1.402404261 1.380326336 0.922180913 1.104611262 1.41034609 1 15.02958146 -5.557797661 24.99502941 1.16469088 1.339886288 0.171410016 0.185849561 327.762017 234611.2793 0.050897402 0.088157216 2.77E-06 5.557797661 0.175195408 T(ph)FEEALAR ddPTM_A459_MK2206_30min_R2 2 TFEEALAR 8 0 E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2;F8WCC1 E7EXA6 CHTF18 Chromosome transmission fidelity protein 18 homolog 1 T(1)FEEALAR;T(1)FEEALAR 129.85 0.0092852 2820400 7200.5 6782.6 4451.2 7948.4 5877.8 5428.5 5430.3 6070.5 3530.4 4515.3 TRUE FALSE 7751.775816 6445.785947 4599.600786 7298.990294 5647.008038 5635.085371 4717.295087 6863.935193 3837.46781 4367.966131 1.774687711 1.475695038 1.053030323 1.671027219 1.29282322 1.290093651 1.079975198 1.571425919 0.878547978 1 12.09274595 -1.522878745 0.14369228 0.943158653 3.313948926 0.387171562 0.227418824 85.10824294 0.812838372 0.895500441 41.64712872 0.03 1.522878745 2.370790273 T(ph)FEELEHVSAPYK ddPTM_A459_MK2206_30min_R1 1 TFEELEHVSAPYK 13 0 Q8N5C6 Q8N5C6 SRBD1 S1 RNA-binding domain-containing protein 1 1 T(1)FEELEHVSAPYK 99.653 0.027052 1152800 849.96 244.61 214.82 180.32 1519.9 1227.3 1075.1 574.2 276.6 300.87 TRUE FALSE 777.6664387 228.6858445 200.2386169 194.2082776 1459.359165 1296.788665 1003.382041 569.1798299 305.3535598 338.1440471 2.29980816 0.676297118 0.592169576 0.574335936 4.315791383 3.835018468 2.967321322 1.683246637 0.903028051 1 8.401494145 -4.476723757 22.40246489 1.928988693 6.310165564 0.006663213 1.325719474 2803.330837 1470924.115 0.358937262 46990.3108 3.34E-05 4.476723757 4.381176871 T(ph)FGHNTMDAVPR ddPTM_A459_MK2206_30min_R2 1 TFGHNTMDAVPR 12 0 G3XAL9;P55011-3;P55011 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 T(0.849)FGHNT(0.151)MDAVPR 89.136 0.035509 6362600 16174 9242.5 11840 12620 12789 19229 16487 9832.8 20361 14358 TRUE FALSE 17412.29388 8783.53089 12234.73969 11588.90563 12286.8396 19960.77307 14322.2371 11117.98072 22131.96298 13889.49964 1.253630032 0.632386416 0.880862523 0.834364515 0.884613551 1.437112466 1.031155727 0.800459413 1.593431265 1 13.76170701 -6.585274637 24.99115127 1.152213229 0.877245773 0.224425293 0.253153819 100.8373145 40386.79778 0.080462842 0.080462848 2.60E-07 6.585274637 -0.274967456 T(ph)FPASNYTVSSR ddPTM_A459_MK2206_30min_R2 3 TFPASNYTVSSR 12 0 O95835;O95835-2;Q6PJG3 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 T(1)FPASNYTVSSR;T(1)FPASNYTVSSR;T(1)FPASNYTVSSR 115.12 0.012477 25689500 6334.2 24684.2 15582.6 23637.2 33019.3 32041.6 21341.1 10039.4 35790.1 19469.3 TRUE FALSE 6819.151222 23458.41852 16102.11611 21705.96515 31722.79637 33260.96554 18538.98793 11351.58405 38903.0582 18834.01834 0.362065657 1.245534442 0.85494852 1.152487205 1.684335005 1.766004734 0.984335239 0.602717054 2.06557398 1 14.20105322 -4.657787395 1.140612333 1.302281551 1.02E-17 0.264500975 0.434344174 3.223203797 2.928625589 0.136607174 5.387785944 2.20E-05 4.657787395 -1.302281551 T(ph)FSFLMNR ddPTM_A459_MK2206_30min_R1 1 TFSFLMNR 8 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 T(0.511)FS(0.489)FLMNR 112.3 0.026271 5437200 2385.1 2516.3 2782.2 2521.5 2799.4 1892.3 2912.9 2559.4 2397.3 2261.7 TRUE FALSE 2182.23472 2352.488413 2593.352016 2715.706367 2687.89397 1999.440391 2718.585756 2537.023436 2646.507914 2541.896471 0.858506531 0.925485534 1.020242974 1.068378039 1.057436446 0.786593952 1.069510811 0.998082914 1.041154879 1 11.31168956 -5.01667407 3.07928299 1.003428411 0.861538069 0.271077908 0.077772524 0.368488493 6.70677326 0.020710688 0.096879736 9.62E-06 5.01667407 -0.141890343 T(ph)FSLDAVPPDHSPR ddPTM_A459_MK2206_30min_R1 1 TFSLDAVPPDHSPR 14 0 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 T(0.726)FS(0.274)LDAVPPDHSPR 93.181 0.020014 17653000 2360.3 2121.8 2959.8 1848.2 3051.6 2675.4 3241.5 3376.7 2911.8 2955.3 TRUE FALSE 2159.544091 1983.670434 2758.897022 1990.548684 2930.04831 2826.878836 3025.265449 3347.177868 3214.49203 3321.424875 0.650186041 0.597234774 0.830636587 0.599305647 0.882166064 0.851104253 0.910833622 1.007753598 0.967805129 1 11.69758657 -6.604799715 0.648184218 1.00825529 0.627917737 0.775611103 0.071670767 0.353535692 0.32903849 0.051002191 0.064468938 2.48E-07 6.604799715 -0.380337553 T(ph)FSLDAVPPDHSPR ddPTM_A459_MK2206_30min_R2 1 TFSLDAVPPDHSPR 14 0 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 T(0.59)FS(0.41)LDAVPPDHSPR 85.988 0.032404 16386000 20375 16871 20952 18677 19506 17488 22355 21471 18357 21245 TRUE FALSE 21934.92567 16033.21067 21650.52922 17151.02936 18740.09643 18153.51809 19419.76165 24277.33342 19953.65868 20551.77739 1.067300665 0.780137424 1.053462618 0.834527789 0.911847967 0.883306478 0.94491884 1.181276585 0.970896984 1 14.32697555 -7.547616618 24.38940683 1.058271772 0.91666457 0.261342898 0.096998531 199.4333221 196620.8754 0.04172138 0.024089274 2.83E-08 7.547616618 -0.141607203 T(ph)FSLTEVR ddPTM_A459_MK2206_30min_R2 1 TFSLTEVR 8 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 T(0.993)FS(0.002)LT(0.005)EVR 117.53 0.020619 2486800 8822.3 8888.5 6544.2 8447 8974.9 7707.3 14405 10039 9091.3 12572 TRUE FALSE 9497.742071 8447.110015 6762.380362 7756.853079 8622.500331 8000.606702 12513.6062 11351.13177 9882.044841 12161.77667 0.780950212 0.694562172 0.556035565 0.637805914 0.70898361 0.657848513 1.028929122 0.933344862 0.812549442 1 13.57006638 -7.250759246 24.9290234 0.938151261 0.668452042 0.756916813 0.075189285 346.9014507 809721.0061 0.030035588 0.023015048 5.61E-08 7.250759246 -0.269699219 T(ph)FSPTYGLLR ddPTM_A459_MK2206_30min_R1 2 TFSPTYGLLR 10 0 O15061;A0A075B7B1;O15061-2;H0YL34 O15061 SYNM Synemin 1 T(0.921)FS(0.076)PT(0.003)YGLLR;T(0.503)FS(0.379)PT(0.118)YGLLR 141.91 0.0029396 193412000 5849.4 5815.3 6043 5137.1 6589.8 5844.8 6754.5 5628.3 5181.9 4666.5 TRUE FALSE 5351.877814 5436.722913 5632.817997 5532.760332 6327.314312 6175.727525 6303.919629 5579.092366 5720.577049 5244.62125 1.020450774 1.036628319 1.074018071 1.054939922 1.206438751 1.177535465 1.201978051 1.063774122 1.090751224 1 12.35662287 -6.100210819 9.591664038 1.133222303 1.046541804 0.26498822 0.061613127 0.514329771 45.84365516 0.018617414 0.024064973 7.94E-07 6.100210819 -0.086680498 T(ph)FSPTYGLLR ddPTM_A459_MK2206_30min_R2 3 TFSPTYGLLR 10 0 O15061;A0A075B7B1;O15061-2;H0YL34 O15061 SYNM Synemin 1 T(0.998)FS(0.001)PTYGLLR;T(0.944)FS(0.055)PT(0.001)YGLLR;T(0.994)FS(0.004)PT(0.002)YGLLR 179.42 0.00025482 117195000 129088 165084 144847 158631 157460 150617 166288 155118 134579 145452 TRUE FALSE 138971.0765 156886.1686 149676.1267 145670.3399 151277.3292 156348.8355 144454.1859 175392.4552 146284.4382 140705.9132 0.987670478 1.114993429 1.063751504 1.035282289 1.075131285 1.111174591 1.026639056 1.246518012 1.039646699 1 17.10232343 -6.530849591 6.658566313 1.096336965 1.055825467 0.036925233 0.069827761 0.425910471 92.15221164 0.0218984 0.022669856 2.95E-07 6.530849591 -0.040511498 T(ph)FWSPELK ddPTM_A459_MK2206_30min_R2 2 TFWSPELK 8 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EPP6;O15083 X6RM00 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 1 T(1)FWSPELK;T(1)FWSPELK 153.05 0.00214 38744000 203240 170971 175805 162264 158522 114165 203105 156224 119933 192658 TRUE FALSE 218800.2107 162480.8288 181666.251 149006.5121 152297.6298 118509.6291 176437.0695 176643.0132 130364.5556 186371.5852 1.173999837 0.871811164 0.974752942 0.799513037 0.817171939 0.635878205 0.946695116 0.947800133 0.699487292 1 17.50782239 -1.856401296 1.042594931 0.836277699 199.8848452 0.412540902 0.113963329 960.0791515 2.344384097 0.035278975 455305.1316 0.013918701 1.856401296 199.0485675 T(ph)GAFS(ph)ERQGSTIGVDFT(ph)MK ddPTM_A459_MK2206_30min_R2 1 TGAFSERQGSTIGVDFTMK 19 1 C9JFM7;Q86YS6-2;Q86YS6 C9JFM7 RAB43 Ras-related protein Rab-43 3 T(1)GAFS(1)ERQGS(0.001)T(0.001)IGVDFT(0.998)MK 56.339 0.047441 7300900 5289.5 16663 8465.2 28184 22378 36740 11937 12787 22986 6863.8 TRUE FALSE 5694.468187 15835.53965 8747.425543 25881.27704 21499.32728 38138.16644 10369.65756 14458.3048 24985.28073 6639.834768 0.857621972 2.384929777 1.317416148 3.897879683 3.237931068 5.743842697 1.561734279 2.177509729 3.762937122 1 12.69693163 -3.638078978 11.52550441 2.698518078 1.489956063 0 1.482558396 0 0 0.342182773 0 0.000230102 3.638078978 -1.208562014 T(ph)GRDTPENGETAIGAENSEK ddPTM_A459_MK2206_30min_R2 2 TGRDTPENGETAIGAENSEK 20 1 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 T(0.5)GRDT(0.5)PENGETAIGAENSEK;T(0.836)GRDT(0.164)PENGETAIGAENSEK 73.435 0.010261 86909700 76343 67830 62322 65272 57641 56162 70205 56215 47564 66793 TRUE FALSE 82187.87878 64461.66083 64399.78437 59939.06881 55377.72472 58299.28426 60986.99917 63562.49351 51701.03074 64613.54988 1.271991385 0.997649269 0.99669163 0.927654786 0.857060552 0.902276448 0.943873217 0.98373319 0.80015772 1 15.97954912 T(ph)GSCSELDACPSK ddPTM_A459_MK2206_30min_R2 1 TGSCSELDACPSK 13 0 A0A1B0GUA8;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2;Q9H1H9;H0Y9Z7 A0A1B0GUA8 KIF13A Kinesin-like protein KIF13A 1 T(0.972)GS(0.028)CSELDACPSK 195.71 0.00047385 23201000 59812 60431 76813 50336 52100 37051 70679 43562 40564 61517 TRUE FALSE 64391.25271 57430.08441 79373.90708 46223.38778 50054.29222 38461.00177 61398.7624 49255.70297 44092.1834 59509.70533 1.082029433 0.965054088 1.333797683 0.776736963 0.841111411 0.64629797 1.03174368 0.827691932 0.740924243 1 15.86083735 -5.785714987 24.99360122 0.830848424 1.110769906 0.484076759 0.136367299 185.2729059 190752.0044 0.037372184 0.055461488 1.64E-06 5.785714987 0.279921482 T(ph)GSESSQT(ph)GTSTTSSR ddPTM_A459_MK2206_30min_R1 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 T(0.967)GS(0.031)ES(0.004)S(0.224)QT(0.747)GT(0.022)S(0.002)T(0.002)T(0.001)SSR 154.46 0.0009297 4168400 2333.8 2448.1 2993.2 2496 1538.3 1374.1 2182 2566.5 2906.9 3071.6 TRUE FALSE 2135.298055 2288.728245 2790.029924 2688.242352 1477.026254 1451.900355 2036.442761 2544.061361 3209.082657 3452.132997 0.618544551 0.662989591 0.808204645 0.778719231 0.427859024 0.420580654 0.589908547 0.736953461 0.929594155 1 11.75327233 -8.187490568 2.375400277 0.991152758 0.6170523 0.576873248 0.118910832 0.251725648 2.540306356 0.12354399 0.037021816 6.49E-09 8.187490568 -0.374100458 T(ph)GSESSQTGTSTTSSR ddPTM_A459_MK2206_30min_R1 3 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 T(0.875)GS(0.063)ES(0.063)SQTGTSTTSSR;T(0.333)GS(0.333)ES(0.333)SQTGTSTTSSR;T(0.989)GS(0.01)ES(0.001)SQTGTSTTSSR 315.47 3.30E-102 377018430 3001.75 4367.98 4594.3 3753.86 2433 1715.15 2629.6 2698.93 3296.54 3850.93 TRUE FALSE 2746.4354 4083.623708 4282.451716 4042.982948 2336.088458 1812.260311 2454.184182 2675.33354 3639.22713 4328.012281 0.634571998 0.943533299 0.989473097 0.934143132 0.539760127 0.418728089 0.567046492 0.618143703 0.84085416 1 12.07948888 -6.255687612 24.80141398 0.627875798 0.888440795 0.236250715 0.178583051 517.535012 2231590.862 0.053567217 0.067247123 5.55E-07 6.255687612 0.260564997 T(ph)GSESSQTGTSTTSSR ddPTM_A459_MK2206_30min_R2 6 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 T(0.826)GS(0.174)ESSQTGTSTTSSR;T(0.468)GS(0.401)ES(0.065)S(0.065)QTGTSTTSSR;T(0.885)GS(0.001)ES(0.028)S(0.02)QT(0.001)GTS(0.002)T(0.002)T(0.014)S(0.045)S(0.001)R;T(0.845)GS(0.152)ES(0.003)SQTGTSTTSSR;T(0.881)GS(0.116)ES(0.002)S(0.001)QTGTSTTSSR;T(0.61)GS(0.388)ES(0.001)SQTGTSTTSSR 271.45 3.39E-50 70937760 11008.65 21039.86 11384.68 9337.05 8403.24 6780.95 15317.02 8909.44 8163 11324.72 TRUE FALSE 11851.48071 19995.05115 11764.23955 8574.183147 8073.286575 7039.003804 13305.87687 10073.9344 8873.002985 10955.19531 1.08181373 1.825166104 1.073850279 0.782659086 0.7369368 0.642526546 1.21457231 0.919557718 0.809935627 1 13.41932759 -5.485687032 7.126362055 0.871953583 1.455866341 0.516932187 0.222534984 0.164964498 25.50171357 0.057335529 0.116832527 3.27E-06 5.485687032 0.583912759 T(ph)GSGSPFAGNSPAR ddPTM_A459_MK2206_30min_R1 1 TGSGSPFAGNSPAR 14 0 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 T(0.747)GS(0.157)GS(0.095)PFAGNSPAR 191.63 0.0002511 64969000 3390.7 3841.8 3397.6 2611.6 3574.9 2463 2904.6 2647.4 2400.2 2183.6 TRUE FALSE 3102.30316 3591.698122 3166.980378 2812.745885 3432.504163 2602.452932 2710.839434 2624.254061 2649.709379 2454.120853 1.264119962 1.463537591 1.290474499 1.146131773 1.398669572 1.060442043 1.104607147 1.069325521 1.079698001 1 11.26099058 -6.71367445 0.599562683 1.019515945 1.369651949 0.619923136 0.092008368 0.55941749 0.439811664 0.073328014 0.087217703 1.93E-07 6.71367445 0.350136004 T(ph)GSGSPFAGNSPAR ddPTM_A459_MK2206_30min_R2 1 TGSGSPFAGNSPAR 14 0 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 T(0.994)GS(0.004)GS(0.002)PFAGNSPAR 188.12 0.00021352 49804000 53954 57711 58857 64927 63946 53203 56658 55378 51417 56490 TRUE FALSE 58084.75972 54845.15566 60819.263 59622.25641 61435.15874 55227.67745 49218.73654 62616.09474 55889.15772 54646.73593 1.062913617 1.003630953 1.112953262 1.091048814 1.124223756 1.010630855 0.900671114 1.145834123 1.022735517 1 15.73784771 -6.789442781 24.96919434 1.017882474 1.077330251 0.198942325 0.063088572 404.2362363 360433.9217 0.0230203 0.020305775 1.62E-07 6.789442781 0.059447777 T(ph)GSNAAQYK ddPTM_A459_MK2206_30min_R1 2 TGSNAAQYK 9 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 T(0.68)GS(0.32)NAAQYK;T(0.908)GS(0.092)NAAQYK 105.03 0.032698 193120000 11161 14486.5 14382.1 12852.3 7543.2 6857.1 8496.6 9146.8 7264.8 9369.9 TRUE FALSE 10211.69834 13543.42622 13405.88312 13842.18637 7242.738371 7245.343076 7929.807317 9066.830492 8020.001957 10530.71395 0.969706175 1.28608813 1.273026994 1.314458491 0.687772776 0.68802012 0.753017065 0.860989154 0.761581978 1 13.36231563 -6.261736205 24.99956755 0.777808473 1.220639617 0.733917382 0.123341783 13.20445265 1112119.084 0.037189793 0.044864201 5.47E-07 6.261736205 0.442831144 T(ph)GSNAAQYK ddPTM_A459_MK2206_30min_R2 1 TGSNAAQYK 9 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 T(0.543)GS(0.457)NAAQYK 98.898 0.045109 175300000 478840 360310 449320 330060 418000 280620 487230 387820 290550 473780 TRUE FALSE 515500.3586 342417.5293 464300.1045 303093.0422 401587.2197 291299.1907 423256.1157 438509.4056 315821.5138 458320.5974 1.124759309 0.747113552 1.01304656 0.661312286 0.876214645 0.635579532 0.92349355 0.95677438 0.689084269 1 18.8059976 -4.751225229 24.75428046 0.830446166 1.124759998 0.29474666 0.135022077 464.8924085 1126593.236 0.031536864 0.423276563 1.77E-05 4.751225229 0.294313831 T(ph)GSNISGASSDISLDEQYK ddPTM_A459_MK2206_30min_R2 2 TGSNISGASSDISLDEQYK 19 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 T(0.548)GS(0.079)NIS(0.372)GAS(0.001)SDISLDEQYK;T(0.901)GS(0.095)NIS(0.004)GASSDISLDEQYK 295.03 1.33E-85 19926300 73370 68132 64345 53960 50472 40602 65871 56904 45763 66154 TRUE FALSE 78987.26361 64748.66395 66490.23019 49551.29539 48490.21568 42147.13756 57222.05857 64341.54818 49743.38302 63995.4004 1.234264699 1.011770589 1.038984517 0.774294638 0.757714076 0.658596357 0.894158927 1.005408948 0.777296223 1 15.9656806 -5.163876037 1.374264016 0.833631504 1.236579492 0.52854676 0.113187129 0.566681274 1.523822382 0.036061654 0.261303653 6.86E-06 5.163876037 0.402947988 T(ph)GSPGSEVVTLQQFLEESNK ddPTM_A459_MK2206_30min_R2 2 TGSPGSEVVTLQQFLEESNK 20 0 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;H0Y470;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 T(0.499)GS(0.499)PGS(0.001)EVVTLQQFLEESNK;T(0.831)GS(0.162)PGS(0.007)EVVTLQQFLEESNK 186.68 1.70E-15 1925810 9758.2 7785 9482.46 6448.24 6908.94 3861.05 12548.2 7052.1 5181.1 10700.6 TRUE FALSE 10505.29529 7398.40822 9798.600484 5921.398165 6637.660301 4007.984963 10900.60627 7973.833683 5631.742713 10351.4403 1.014863149 0.71472259 0.946592957 0.572036161 0.641230603 0.387191043 1.053052131 0.770311517 0.544054021 1 13.3375439 -5.750468554 24.99160508 0.698142147 0.87432587 0.141504132 0.203054083 448.4275736 1021511.329 0.054997342 0.09408762 1.78E-06 5.750468554 0.176183723 T(ph)GSPGSEVVTLQQFLEESNKLTSVQIK ddPTM_A459_MK2206_30min_R1 1 TGSPGSEVVTLQQFLEESNKLTSVQIK 27 1 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;H0Y470;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 T(0.499)GS(0.499)PGS(0.003)EVVTLQQFLEESNKLTSVQIK 179.55 5.18E-26 5492600 812.43 650.83 536.85 490.59 459.56 320.89 518.64 602.51 347.52 234.82 TRUE FALSE 743.3285623 608.4608487 500.4101177 528.3753268 441.2547521 339.0585145 484.0424719 597.2423186 383.6459476 263.9112744 2.816585096 2.305550796 1.896130125 2.00209456 1.671981438 1.284744334 1.834110623 2.263042077 1.453692907 1 8.043909174 -1.522878746 0.504172532 1.615905633 41.79395642 0.596563494 0.321912024 82.66511942 0.868304444 0.179126846 3524.960824 0.03 1.522878746 40.17805079 T(ph)GSPTFVR ddPTM_A459_MK2206_30min_R2 1 TGSPTFVR 8 0 Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;Q9UPP1-5;B0QZZ4;Q5JPR8;B0QZZ2;B0QZZ3;B0QZE1 Q9UPP1-4 PHF8 Histone lysine demethylase PHF8 1 T(0.59)GS(0.319)PT(0.091)FVR 106.68 0.031859 4845100 22600 27821 22294 24772 28068 25889 28899 23725 24181 21777 TRUE FALSE 24330.27338 26439.4496 23037.27083 22748.04836 26965.90929 26874.22404 25104.52659 26825.93896 26284.21967 21066.41827 1.154931658 1.255051962 1.093554231 1.079825154 1.280042432 1.275690233 1.191684617 1.273398193 1.247683366 1 14.36265743 -4.40444326 12.15534576 1.196913407 9.35E-05 0.004374635 0.093871637 748537.647 1307185.802 0.023335778 23783222.62 3.94E-05 4.40444326 -1.196819903 T(ph)GSQGQCTQVR ddPTM_A459_MK2206_30min_R2 1 TGSQGQCTQVR 11 0 P62857 P62857 RPS28 40S ribosomal protein S28 1 T(0.99)GS(0.01)QGQCTQVR 115.37 0.014491 33510000 5937.1 6302.9 4695.2 6650.4 5881.2 5013.4 5862.4 7514.2 6642.3 5769.9 TRUE FALSE 6391.648941 5989.907151 4851.735625 6107.041046 5650.274537 5204.18845 5092.659838 8496.33174 7220.035247 5581.628636 1.145122572 1.073146843 0.869232968 1.094132456 1.012298543 0.932378127 0.912396752 1.522195813 1.293535582 1 12.44647042 -7.746157232 24.9999757 1.305899344 1.003742816 0.41505608 0.143209707 188.574412 308488.8454 0.065471056 0.037620221 1.79E-08 7.746157232 -0.302156528 T(ph)GSSGALGPPER ddPTM_A459_MK2206_30min_R2 2 TGSSGALGPPER 12 0 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 T(0.927)GS(0.052)S(0.021)GALGPPER;T(0.435)GS(0.129)S(0.435)GALGPPER 114.87 0.012619 41210000 57854 74718 54755 57009 51350 40075 65555 53170 42865 62194 TRUE FALSE 62283.34672 71007.61277 56580.50437 52351.18234 49333.74099 41600.08221 56947.54975 60119.50156 46593.32022 60164.61487 1.035215581 1.180222177 0.940428265 0.870132427 0.819979337 0.691437688 0.94652895 0.999250169 0.774430624 1 15.87662761 -5.447471319 4.024701656 0.866709547 1.105883379 0.477537755 0.0970787 0.187743681 5.703148456 0.026699974 0.057871961 3.57E-06 5.447471319 0.239173832 T(ph)GSTPSIASTHSELSTYSNNSGNAAVIK ddPTM_A459_MK2206_30min_R2 1 TGSTPSIASTHSELSTYSNNSGNAAVIK 28 0 Q9ULD2 Q9ULD2 MTUS1 Microtubule-associated tumor suppressor 1 1 T(0.202)GS(0.202)T(0.202)PS(0.091)IAS(0.101)T(0.101)HS(0.101)ELSTYSNNSGNAAVIK 53.987 0.012791 5720900 8875.5 16207 11736 16830 12579 14279 18263 13649 10106 13760 TRUE FALSE 9555.015104 15402.18395 12127.27238 15454.93516 12085.08526 14822.39735 15865.04616 15432.97116 10985.00161 13311.01233 0.717827831 1.15710087 0.91107063 1.161063846 0.907901289 1.113543958 1.191873749 1.159413783 0.825256663 1 13.70033267 -5.739806271 24.99526387 1.060412227 0.951509873 0.117636026 0.148578215 577.7724974 667562.7068 0.039151959 0.067737598 1.82E-06 5.739806271 -0.108902354 T(ph)GSTSSKEDDYESDAATIVQK ddPTM_A459_MK2206_30min_R1 1 TGSTSSKEDDYESDAATIVQK 21 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.451)GS(0.451)T(0.045)S(0.045)S(0.009)KEDDYESDAATIVQK 92.416 0.00081835 72696000 4869.6 5887.8 6383.1 5135.7 3105 2252.2 2797 3451.1 4761.6 4053.9 TRUE FALSE 4455.414949 5504.50315 5949.832956 5531.252504 2981.321275 2379.717618 2610.417233 3420.927397 5256.58536 4556.127737 0.977895091 1.208153824 1.305896871 1.214024896 0.65435419 0.522311435 0.572946455 0.750840976 1.15373968 1 12.15359248 -6.256723579 24.86339947 0.740433848 1.187997363 0.498063258 0.195056589 300.8559622 1586219.717 0.061278126 0.076503079 5.54E-07 6.256723579 0.447563515 T(ph)GSYGALAEITASK ddPTM_A459_MK2206_30min_R1 2 TGSYGALAEITASK 14 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 T(0.965)GS(0.035)YGALAEITASK;T(0.87)GS(0.13)YGALAEITASK 207.4 1.59E-05 291092000 9414.7 12605 11531.7 10599.5 7405.9 6289 8218.6 8315.5 9504.8 9179.5 TRUE FALSE 8613.930326 11784.41221 10748.96033 11415.87533 7110.907321 6645.077745 7670.35219 8242.79846 10492.85797 10316.72576 0.834948076 1.142262815 1.041896487 1.106540543 0.689260089 0.644107239 0.743487068 0.798974273 1.017072491 1 13.33269755 -6.256111576 24.99149879 0.793263602 1.040078796 0.369536214 0.136141728 438.8910858 2058735.791 0.041183655 0.0516052 5.54E-07 6.256111576 0.246815195 T(ph)GSYGALAEITASK ddPTM_A459_MK2206_30min_R2 2 TGSYGALAEITASK 14 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 T(0.678)GS(0.318)YGALAEIT(0.004)ASK;T(0.859)GS(0.141)YGALAEITASK 162.64 0.000641 194870000 220047 211494 236148 191841 190402 133352 231928 172135 152490 198093 TRUE FALSE 236893.9675 200991.5155 244021.0565 176166.9766 182925.8608 138426.8038 201475.575 194633.6355 165753.3046 191629.2416 1.23620991 1.048856186 1.273401984 0.919311558 0.954582188 0.722367853 1.051382207 1.01567816 0.864968745 1 17.5479582 -5.774997099 24.99423604 0.930370061 1.172426036 0.562442289 0.102251933 167.3165809 308455.031 0.028638256 0.042741342 1.68E-06 5.774997099 0.242055974 T(ph)GTPSDPR ddPTM_A459_MK2206_30min_R1 1 TGTPSDPR 8 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 T(0.95)GT(0.043)PS(0.007)DPR 114.89 0.023643 17558000 10159 12686 11964 9683.6 6255.6 5442.7 8136.8 7603.8 8689 12041 TRUE FALSE 9294.923703 11860.13909 11151.91701 10429.43255 6006.426206 5750.860971 7594.008918 7537.320778 9592.252644 13532.72998 0.686847644 0.87640403 0.824070016 0.770682084 0.443844384 0.424959412 0.561158682 0.556969716 0.708818742 1 13.72416529 -6.115895262 6.885744204 0.581963309 0.802697348 0.204528339 0.159700335 0.313154007 16.70185056 0.045721769 0.059343087 7.66E-07 6.115895262 0.220734039 T(ph)GTPSDPR ddPTM_A459_MK2206_30min_R2 1 TGTPSDPR 8 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 T(0.908)GT(0.049)PS(0.043)DPR 98.582 0.045237 13805000 96558 73792 79936 59705 59072 43661 83259 66939 54191 79376 TRUE FALSE 103950.5547 70127.59658 82601.02634 54826.91051 56752.53647 45322.54995 72326.99329 75688.15714 58904.43523 76785.96762 1.3537702 0.913286617 1.075730747 0.714022525 0.739100362 0.590245215 0.941929828 0.98570298 0.767124998 1 16.22855507 -2.443304945 0.960694319 0.824806497 53.28601831 0.531182632 0.141899305 140.2368905 1.71852345 0.047512313 15710.27123 0.003603255 2.443304945 52.46121181 T(ph)HENVEALVER ddPTM_A459_MK2206_30min_R1 1 THENVEALVER 11 0 Q8WZ42-6 Q8WZ42-6 TTN Titin 1 T(1)HENVEALVER 87.568 0.042366 0 3426.4 2889.3 3745.6 2702 2738.2 2773.8 4030.1 2861.7 4099.2 4645.5 TRUE FALSE 3134.966687 2701.206045 3491.359108 2910.108508 2629.131696 2930.850159 3761.259382 2836.680459 4525.326509 5221.019612 0.600451046 0.517371365 0.668712123 0.557383179 0.503566715 0.561355899 0.720407059 0.54331925 0.866751486 1 12.35011586 -8.410151349 3.23463144 0.997880614 0.584298845 0.829441568 0.064502534 0.088329986 1.702320297 0.062090677 0.016600803 3.89E-09 8.410151349 -0.413581769 T(ph)HPLLLRRHFGSSDT(ph)FST(ph)HMS(ph)LTGK ddPTM_A459_MK2206_30min_R2 1 THPLLLRRHFGSSDTFSTHMSLTGK 25 2 F5H269;Q9Y485 F5H269 DMXL1 DmX-like protein 1 4 T(0.999)HPLLLRRHFGS(0.189)S(0.189)DT(0.426)FS(0.426)T(0.753)HMS(0.509)LT(0.509)GK 44.312 0.025938 3375700 5683.1 4579 6585.6 7495.4 5286.4 6987.6 3854.6 5041 4678.8 5856.4 TRUE FALSE 6118.202506 4351.613518 6805.160617 6883.001843 5078.829374 7253.518014 3348.48639 5699.876008 5085.753567 5665.306148 1.07994208 0.768116216 1.201199095 1.214939081 0.896479244 1.28033999 0.591051269 1.006102029 0.897701454 1 12.4679382 -7.248683105 24.99943594 0.874222167 1.063808199 0.230320685 0.178394313 1244.244358 2438443.81 0.067329971 0.051802517 5.64E-08 7.248683105 0.189586032 T(ph)HSAGTSPTITHQK ddPTM_A459_MK2206_30min_R1 1 THSAGTSPTITHQK 14 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 T(0.991)HS(0.007)AGT(0.001)S(0.001)PTITHQK 97.235 0.015235 8870300 3026.4 2631.4 3262.1 2888 3349.6 3735.3 4045.8 4269.7 3331.9 4314 TRUE FALSE 2768.988788 2460.095382 3040.677741 3110.43426 3216.178339 3946.789458 3775.912064 4232.370463 3678.262928 4848.450889 0.571107938 0.507398226 0.627144177 0.64153156 0.663341429 0.814031027 0.778787318 0.872932522 0.758647043 1 12.24330816 -5.590130827 0.18369332 1.050627198 0.182875921 0.87496356 0.050109178 3.763202559 0.174953526 0.154370605 0.791900051 2.57E-06 5.590130827 -0.867751277 T(ph)HSASFYSVSQPK ddPTM_A459_MK2206_30min_R2 1 THSASFYSVSQPK 13 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 T(0.727)HS(0.221)AS(0.052)FYSVSQPK 85.28 0.037982 2614400 25513 41789 30794 43918 41177 36377 38569 29949 24359 29578 TRUE FALSE 27466.2949 39713.81903 31820.65659 40329.75891 39560.18408 37761.35223 33504.84397 33863.43713 26477.70179 28612.87228 0.959927917 1.387970373 1.112109832 1.409497044 1.382600939 1.319733016 1.170971011 1.183503592 0.925377275 1 14.80437671 -8.04704033 1.963368272 0.960421734 1.267011334 0.401374111 0.135474943 0.332281565 2.304214434 0.114507479 0.03709748 8.97E-09 8.04704033 0.3065896 T(ph)HSFENVSCHLPDSR ddPTM_A459_MK2206_30min_R1 1 THSFENVSCHLPDSR 15 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 T(0.569)HS(0.431)FENVSCHLPDSR 106.89 0.0059284 13128000 2115.1 1679.6 1903.4 1663.9 2179.8 2077.1 1821.9 1796.8 1517 1595.2 TRUE FALSE 1935.199638 1570.257735 1774.202511 1792.053866 2092.97395 2194.703607 1700.364375 1781.090767 1674.697579 1792.825419 1.07941332 0.875856465 0.989612537 0.999569644 1.167416486 1.224159131 0.94842719 0.99345466 0.934110796 1 10.80801929 -3.594481882 15.3469949 1.023182133 89.42775644 0 0.10133593 0 5.55E-18 0.024994691 0 0.000254401 3.594481882 88.40457431 T(ph)HSQGGYGSQGYK ddPTM_A459_MK2206_30min_R1 1 THSQGGYGSQGYK 13 0 K7ERS0;K7EPH2;K7ER00;Q9Y285-2;Q9Y285 K7ERS0 FARSA Phenylalanine--tRNA ligase alpha subunit 1 T(0.567)HS(0.433)QGGYGSQGYK 97.32 0.018256 7957200 4396.2 4183.6 4162.4 3831.3 4365.8 3692.8 4618.9 4478.5 3174.4 3325.4 TRUE FALSE 4022.280105 3911.24688 3879.867885 4126.38739 4191.900941 3901.883145 4310.781609 4439.344947 3504.39024 3737.375657 1.076231151 1.046522276 1.038126279 1.10408687 1.121616162 1.044016846 1.153424757 1.187824119 0.937660691 1 11.86780987 -4.466613639 14.33928032 1.078579438 1.061132692 0 0.070661535 8199333.029 64363746.35 0.017171127 3959872.478 3.41E-05 4.466613639 -0.017446747 T(ph)HSQGGYGSQGYK ddPTM_A459_MK2206_30min_R2 1 THSQGGYGSQGYK 13 0 K7ERS0;K7EPH2;K7ER00;Q9Y285-2;Q9Y285 K7ERS0 FARSA Phenylalanine--tRNA ligase alpha subunit 1 T(0.571)HS(0.429)QGGYGSQGYK 95.873 0.019851 13766000 31488 58033 42030 59771 55947 57392 66997 44866 39337 40948 TRUE FALSE 33898.74549 55151.16561 43431.25922 54887.5181 53750.23967 59576.09278 58200.21342 50730.14025 42758.46115 39611.87011 0.855772408 1.392288863 1.096420318 1.385633093 1.356922547 1.503995964 1.469261947 1.280680263 1.079435559 1 15.27364519 -4.754673468 24.96974106 1.305838438 0.855771631 0.373318156 0.164835813 239.9975747 885635.6541 0.04098706 0.390548196 1.76E-05 4.754673468 -0.450066807 T(ph)HSTSSSLGSGESPFSR ddPTM_A459_MK2206_30min_R2 1 THSTSSSLGSGESPFSR 17 0 F8WBF9;Q5TH30;Q9UGV2-3;Q9UGV2-2;Q9UGV2 F8WBF9 NDRG3 Protein NDRG3 1 T(0.433)HS(0.433)T(0.129)S(0.004)S(0.001)SLGSGESPFSR 74.324 0.031623 7382300 3683.7 28242 15147 28029 26338 27400 31698 18791 19335 25849 TRUE FALSE 3965.726904 26839.54335 15651.99342 25738.94104 25303.83778 28442.7262 27536.01452 21247.04822 21016.72335 25005.54925 0.158593873 1.073343484 0.625940797 1.029329162 1.011928894 1.137456567 1.101196149 0.849693322 0.840482372 1 14.60996067 -4.756561024 24.99971816 0.961364307 0.158592648 0.733826079 0.145382739 81.1631939 415882.2826 0.037591343 0.301381122 1.75E-05 4.756561024 -0.802771659 T(ph)HT(ph)GEKPY(ph)VCKECGKT(ph)FSR ddPTM_A459_MK2206_30min_R2 1 THTGEKPYVCKECGKTFSR 19 3 P0CG24 P0CG24 ZNF883 Zinc finger protein 883 4 T(1)HT(1)GEKPY(1)VCKECGKT(0.546)FS(0.454)R 43.895 0.046965 0 3362.3 5271.9 5153.1 4632.5 3087.1 4991.3 4295 3804.2 3743 2869.6 TRUE FALSE 3619.720273 5010.105112 5324.901782 4254.009931 2965.884943 5181.247419 3731.061341 4301.422002 4068.559374 2775.965187 1.303950168 1.804815541 1.91821634 1.532443545 1.068415756 1.866467002 1.344059125 1.549523035 1.465637751 1 11.43877376 -12.47445543 0.201369681 2.30E-10 1.659531356 0.305408721 0.250536244 69.61871404 1.441866742 30.43925971 0.645067647 3.35E-13 12.47445543 1.659531356 T(ph)HTGERPNACADCGK ddPTM_A459_MK2206_30min_R2 1 THTGERPNACADCGK 15 1 Q6DD87 Q6DD87 ZNF787 Zinc finger protein 787 1 T(0.5)HT(0.5)GERPNACADCGK 60.55 0.047193 4781400 37019 40771 29928 42235 40143 26564 40653 29513 25395 37603 TRUE FALSE 39853.2031 38746.37143 30925.78458 38784.2654 38566.78412 27574.91163 35315.21227 33370.45043 27603.8112 36376.01719 1.095590067 1.065162555 0.850169616 1.066204285 1.060225585 0.758051974 0.970837794 0.917375046 0.758846441 1 15.15069997 -6.737037053 24.9995826 0.881471596 1.021866293 0.362978858 0.096861008 271.8420273 278494.8203 0.031803102 0.031788789 1.83E-07 6.737037053 0.140394697 T(ph)IAQDYGVLK ddPTM_A459_MK2206_30min_R1 1 TIAQDYGVLK 10 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 1 T(1)IAQDYGVLK 107.39 0.026477 6627900 2491.3 2713.2 2587.6 2287.6 2159.1 2143.8 3038.4 2372.4 2609 2568.5 TRUE FALSE 2279.401853 2536.570187 2411.960921 2463.791348 2073.098475 2265.180103 2835.71388 2351.658357 2880.214886 2886.705171 0.789620594 0.878707743 0.835541137 0.853496011 0.718153865 0.784693957 0.982335816 0.814651382 0.997751663 1 11.49520805 -8.062396988 0.992961899 1.003092311 0.818385648 0.492965973 0.066428744 0.469836901 0.882606856 0.06247768 0.022740176 8.66E-09 8.062396988 -0.184706663 T(ph)IHTFPCLK ddPTM_A459_MK2206_30min_R2 1 TIHTFPCLK 9 0 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 T(1)IHTFPCLK 87.568 0.043854 10913000 59583 70401 64339 67260 67939 67280 64358 49907 59330 62565 TRUE FALSE 64144.72029 66904.98871 66484.03015 61764.64285 65271.37349 69840.38755 55907.71729 56430.01626 64490.41616 60523.50917 1.05983148 1.105438029 1.098482739 1.020506638 1.078446613 1.153938172 0.923735554 0.932365242 1.065543242 1 15.88520802 -7.267429996 24.99260673 0.97477478 1.084218411 0.531738264 0.048456805 390.5230604 1629237.677 0.020140649 0.013960282 5.40E-08 7.267429996 0.109443631 T(ph)IPIDGNFFTYTR ddPTM_A459_MK2206_30min_R1 2 TIPIDGNFFTYTR 13 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 1 T(1)IPIDGNFFTYTR;T(1)IPIDGNFFTYTR 184 0.00028546 57940000 840.77 974.46 1082.96 896.55 1040.13 899.67 1072.69 1003.43 861.42 709.45 TRUE FALSE 769.2580964 911.0224769 1009.451692 965.6024363 998.6994196 950.6085379 1001.132807 994.6571173 950.9676916 797.3420221 0.964778069 1.142574268 1.266020935 1.211026648 1.25253579 1.192221796 1.255587665 1.247466068 1.192672235 1 9.639054895 -4.819104567 3.027425553 1.214560572 0.93559945 0.477514882 0.073628002 0.249647646 3.523990239 0.017081683 0.162766574 1.52E-05 4.819104567 -0.278961122 T(ph)IPIDGNFFTYTR ddPTM_A459_MK2206_30min_R2 2 TIPIDGNFFTYTR 13 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 1 T(1)IPIDGNFFTYTR;T(1)IPIDGNFFTYTR 152.07 0.0010491 15156400 9356.8 10072 10984.6 14462.4 14182.7 10786.3 13753.3 12153.2 10255.7 13375.9 TRUE FALSE 10073.1638 9571.839126 11350.82108 13280.77566 13625.81594 11196.7802 11947.47519 13741.66497 11147.72225 12939.44548 0.778484968 0.739741061 0.877226238 1.026379042 1.053044812 0.865321487 0.923337496 1.061997981 0.861530138 1 13.65948817 -5.475262886 3.743224194 0.969650555 0.76206587 0.607802489 0.067546689 0.150087917 4.279716076 0.018525987 0.03968915 3.35E-06 5.475262886 -0.207584685 T(ph)IQT(ph)IALIT(ph)YLMEHKR ddPTM_A459_MK2206_30min_R1 1 TIQTIALITYLMEHKR 16 1 P51531;F6VDE0;P51531-2;A0A0U1RQZ9;A0A2R8Y7F3;A0A2R8Y4C5;A0A2R8YF58;A0A2R8Y526;A0A2R8Y7Y7;A0A2R8YF80;A0A2R8Y6N0;A0A2R8Y440;A0A2R8YFV8;A0A2R8YG32;A0A2R8YGG3;A0A2R8Y7S2;A0A2R8Y4P4;Q9HBD4;A0A2R8YCY3;A0A2R8Y6V2;A0A2R8YDA1;A0A2R8YGP5;A0A0U1RQE1;A0A0A0MT49;P51532-5;P51532-2;P51532-3;P51532-4;P51532 P51531 SMARCA2;SMARCA4 Probable global transcription activator SNF2L2;Transcription activator BRG1 3 T(1)IQT(1)IALIT(0.97)Y(0.03)LMEHKR 54.047 0.02973 6672800 3578.8 4464.3 4274.7 5316.4 3322.6 2442.1 2319.8 4932.4 2413.3 1115.3 TRUE FALSE 3274.404267 4173.673259 3984.545274 5725.870049 3190.253806 2580.369592 2165.050375 4889.276547 2664.171171 1253.471784 2.612268029 3.329690633 3.178807313 4.568008727 2.54513412 2.058578122 1.727243008 3.900587639 2.125433699 1 10.29171381 -6.498998233 24.23057851 2.314837079 3.417997973 0.33828388 0.820179633 670.7958087 680629.6187 0.254257429 0.286504472 3.17E-07 6.498998233 1.103160895 T(ph)ISDGTISASK ddPTM_A459_MK2206_30min_R2 2 TISDGTISASK 11 0 A0A075B6Q2;S4R347;Q5T0N5-3;Q5T0N5-4;Q5T0N5-2;Q5T0N5-5;Q5T0N5 A0A075B6Q2 FNBP1L Formin-binding protein 1-like 1 T(0.978)IS(0.022)DGT(0.001)ISASK;T(0.66)IS(0.34)DGTISASK 190.66 4.64E-05 73050000 286937 374260 334411 364096 338306 295977 339476 304571 257280 272013 TRUE FALSE 308905.1173 355674.7926 345560.0958 334348.1921 325022.4066 307240.6121 294902.3934 344379.4754 279657.7493 263137.2381 1.173931594 1.351670312 1.313231447 1.270622868 1.235182101 1.167605978 1.120717066 1.308744737 1.062782871 1 18.0054559 -8.530110966 0.30513601 0.963713588 1.306694872 0.556789869 0.073145826 1.54828308 0.428735262 0.188542896 0.10722323 2.95E-09 8.530110966 0.342981284 T(ph)ISEPDEQR ddPTM_A459_MK2206_30min_R2 1 TISEPDEQR 9 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 T(0.654)IS(0.346)EPDEQR 141.91 0.0050645 20485000 242510 280270 255440 280810 253230 239960 300260 204850 226080 272900 TRUE FALSE 261076.7521 266352.1994 263956.2421 257866.9247 243286.9178 249091.8459 260835.5013 231624.5984 245744.0297 263995.2953 0.988944715 1.008927826 0.999852068 0.976786061 0.921557778 0.943546534 0.98803087 0.877381538 0.930865186 1 18.01015269 -6.038488645 3.765066607 0.939787553 0.999468233 0.373558284 0.032423438 0.229087927 6.824580598 0.009680974 0.0135501 9.15E-07 6.038488645 0.05968068 T(ph)ISNPEVVMK ddPTM_A459_MK2206_30min_R2 1 TISNPEVVMK 10 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6;F8W9I4;E9PFY5 A8MQ02 MLLT4 Afadin 1 T(0.926)IS(0.074)NPEVVMK 124.48 0.0089494 20214000 71014 104120 87974 83062 74136 71714 103220 88848 77045 83522 TRUE FALSE 76450.88644 98949.5522 90907.00925 76275.5689 71225.04814 74443.12652 89667.09001 100460.7387 83746.23483 80796.68398 0.94621317 1.224673431 1.125132923 0.944043309 0.881534299 0.921363636 1.109786758 1.243377002 1.03650584 1 16.30200846 -9.863393463 12.50179472 1.000016625 1.051405955 0.013532305 0.120124995 0 0 0.127471645 0.030916415 1.37E-10 9.863393463 0.05138933 T(ph)ISPPTLGTLR ddPTM_A459_MK2206_30min_R2 1 TISPPTLGTLR 11 0 Q9UQ84;Q9UQ84-4 Q9UQ84 EXO1 Exonuclease 1 1 T(0.997)IS(0.003)PPTLGTLR 145.28 0.001648 10015000 23601 32949 27522 32328 29817 32846 31609 25303 25521 28452 TRUE FALSE 25407.91071 31312.80057 28439.56974 29686.69899 28646.23476 34095.97755 27458.70033 28610.18898 27740.77045 27523.61357 0.923131356 1.137670404 1.033278921 1.078590168 1.040787566 1.238790011 0.997641544 1.039477934 1.007889839 1 14.74838227 T(ph)ISPSTSNNIPLMR ddPTM_A459_MK2206_30min_R2 4 TISPSTSNNIPLMR 14 0 O94806;O94806-2;Q15139;F8WBA3 O94806;Q15139 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 T(0.982)IS(0.017)PS(0.001)TSNNIPLMR;T(0.945)IS(0.054)PS(0.001)TSNNIPLMR;T(0.946)IS(0.053)PS(0.001)TSNNIPLMR;T(0.813)IS(0.185)PS(0.001)T(0.001)SNNIPLMR 198.81 0.00020851 66170600 141761 160623 157532 168747 148551 141498 164962 136729 142860 135591 TRUE FALSE 152614.3312 152646.6954 162784.0383 154959.8303 142718.1413 146882.8055 143302.2912 154599.9498 155285.7046 131166.6768 1.163514506 1.163761247 1.24104721 1.181396328 1.088067067 1.119817999 1.092520561 1.178652639 1.183880757 1 17.00104172 -6.163628138 6.516797381 1.119131688 1.190470114 0.332630683 0.052565848 0.323582194 18.29633155 0.015543233 0.020158822 6.86E-07 6.163628138 0.071338426 T(ph)ISQEFLTPGK ddPTM_A459_MK2206_30min_R2 1 TISQEFLTPGK 11 0 E7EUA0;Q0ZGT2-2;Q0ZGT2;E7ETM8;Q0ZGT2-4;Q0ZGT2-3;H7BXY5 E7EUA0 NEXN Nexilin 1 T(0.994)IS(0.006)QEFLTPGK 174.46 0.00030539 4704600 42133 38675 40682 40409 37854 31533 44658 30592 28754 40720 TRUE FALSE 45358.73487 36754.45574 42038.31758 37107.45544 36367.66176 32733.01041 38794.35096 34590.47944 31254.97094 39391.30973 1.151490904 0.933060007 1.067197762 0.942021367 0.923240735 0.830970349 0.984845419 0.878124634 0.793448381 1 15.26558977 -1.522878745 0.445246657 0.890695122 5.950307259 0.463751895 0.074303182 76.6561058 0.933157729 0.045855886 351.5212957 0.03 1.522878745 5.059612136 T(ph)ISQSSSLK ddPTM_A459_MK2206_30min_R2 2 TISQSSSLK 9 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 T(0.948)IS(0.051)QS(0.001)SSLK;T(0.612)IS(0.38)QS(0.005)S(0.003)SLK 144.7 0.0044995 159069000 211060 252640 261290 223813 286590 283170 426200 369130 401730 547720 TRUE FALSE 227218.9159 240094.265 270001.2782 205526.762 275337.0366 293946.2328 370239.428 417376.5584 436671.7492 529847.9413 0.428837971 0.453138054 0.509582575 0.387897632 0.519652933 0.5547747 0.698765437 0.787728942 0.824145411 1 19.01521886 -7.702018781 0.678450641 0.984537933 0.433826369 0.962582924 0.036958716 0.120991068 0.109555364 0.034688994 0.01807664 1.99E-08 7.702018781 -0.550711564 down T(ph)ISVLASPSVPLLQHR ddPTM_A459_MK2206_30min_R2 1 TISVLASPSVPLLQHR 16 0 A0A1B0GTU4;A0A1B0GV30 A0A1B0GTU4 1 T(0.76)IS(0.24)VLASPSVPLLQHR 92.679 0.014373 2142300 13373 13697 15164 12389 13892 13049 12411 10202 11031 12939 TRUE FALSE 14396.84716 13016.8269 15669.56019 11376.77907 13346.53028 13545.58884 10781.42079 11535.43643 11990.45644 12516.80149 1.150201765 1.039948337 1.251882137 0.908920628 1.066289203 1.082192511 0.861355898 0.921596179 0.957948918 1 13.61157833 -6.389437698 0.780375406 0.937026219 1.131247369 0.368878937 0.090022733 0.729874689 0.978220287 0.052947136 0.078259665 4.08E-07 6.389437698 0.194221151 T(ph)KFASDDEHDEHDENGATGPVK ddPTM_A459_MK2206_30min_R1 2 TKFASDDEHDEHDENGATGPVK 22 1 P05455 P05455 SSB Lupus La protein 1 T(0.803)KFAS(0.197)DDEHDEHDENGATGPVK;T(0.757)KFAS(0.243)DDEHDEHDENGATGPVK 85.76 0.0038335 42284000 7428.64 9050.2 8061.14 7418.06 6674.06 6601.49 6563.3 6806.49 6866.55 6320.93 TRUE FALSE 6796.795159 8461.030335 7513.972276 7989.400267 6408.218058 6975.260659 6125.474232 6746.981576 7580.352445 7104.014529 0.956754119 1.191020978 1.057707898 1.124631746 0.902055877 0.9818759 0.862255308 0.949742086 1.067051934 1 12.79441882 -6.257289662 24.97743463 0.95414083 1.088505224 0.38315713 0.075443885 341.6991097 2056708.801 0.02185805 0.02722453 5.53E-07 6.257289662 0.134364395 T(ph)KFASDDEHDEHDENGATGPVK ddPTM_A459_MK2206_30min_R2 4 TKFASDDEHDEHDENGATGPVK 22 1 P05455 P05455 SSB Lupus La protein 1 T(0.568)KFAS(0.432)DDEHDEHDENGATGPVK;T(0.793)KFAS(0.203)DDEHDEHDENGAT(0.004)GPVK;T(0.79)KFAS(0.21)DDEHDEHDENGATGPVK;T(0.772)KFAS(0.228)DDEHDEHDENGATGPVK 59.189 0.010036 382317700 316807 352665 347457 368826 382364 275354 424728 308318 263667 367921 TRUE FALSE 341061.9875 335152.1689 359041.043 338691.736 367350.4681 285832.7894 368960.7034 348616.2212 286600.2791 355915.7679 0.958266023 0.94166148 1.00878094 0.951606438 1.032127546 0.803091111 1.036651749 0.979490803 0.805247491 1 18.44117632 T(ph)KSNSLSEQLAINTSPDAVK ddPTM_A459_MK2206_30min_R2 2 TKSNSLSEQLAINTSPDAVK 20 1 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 T(0.516)KS(0.342)NS(0.066)LS(0.076)EQLAINTSPDAVK;T(0.355)KS(0.355)NS(0.081)LS(0.209)EQLAINTSPDAVK 93.34 0.001756 15578900 108677 119208 129519 162444 147364 94678 164685 106954 77574 140215 TRUE FALSE 116997.3947 113288.3041 133837.0988 149171.8056 141577.7489 98281.03763 143061.6617 120933.255 84321.2463 135639.796 0.8625595 0.83521435 0.986709673 1.099764302 1.043777365 0.724573765 1.054717464 0.891576503 0.621655655 1 17.04942099 -8.010847718 24.66789134 0.792757231 0.944938672 0.127516816 0.136802056 754.5105439 1715758.915 0.081999048 0.035156399 9.75E-09 8.010847718 0.152181442 T(ph)KSPPASSAASADQHSQSGSSSDNTER ddPTM_A459_MK2206_30min_R2 1 TKSPPASSAASADQHSQSGSSSDNTER 27 1 Q8IY57-3;Q8IY57;Q8IY57-5 Q8IY57-3 YAF2 YY1-associated factor 2 1 T(0.285)KS(0.205)PPAS(0.242)S(0.242)AAS(0.027)ADQHSQSGSSSDNTER 96.395 3.25E-06 1923600 1089.3 4012.6 4241.5 6033.2 7958.7 8303.7 7602.5 4024.8 5157.9 3177.3 TRUE FALSE 1172.697646 3813.340119 4382.909493 5540.268261 7646.201449 8619.703122 6604.282618 4550.855179 5606.524819 3073.624961 0.381535698 1.240665392 1.425974069 1.802519283 2.487681986 2.804409527 2.14869501 1.480614986 1.82407577 1 11.58572543 -4.981538665 1.174520334 2.018719956 0.034864237 0.487349218 0.486332016 0.97931847 1.456887459 0.161763825 2.192522598 1.04E-05 4.981538665 -1.983855719 T(ph)KSPTDDEVTPSAVVR ddPTM_A459_MK2206_30min_R1 2 TKSPTDDEVTPSAVVR 16 1 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 T(0.875)KS(0.063)PT(0.063)DDEVTPSAVVR;T(0.828)KS(0.168)PT(0.004)DDEVTPSAVVR 195.77 1.30E-05 92584000 3193.4 3244.5 3425.3 2712 3040 2451.5 3032.9 3177.1 2844.4 2795.2 TRUE FALSE 2921.784561 3033.28246 3192.800179 2920.87871 2918.910363 2590.301811 2830.580775 3149.32295 3140.085559 3141.490479 0.93006316 0.965555198 1.016332916 0.929774809 0.929148244 0.824545492 0.901031149 1.002493234 0.999552786 1 11.61723349 -7.774993574 24.60749001 1.000767308 0.929027293 0.348790422 0.045457104 266.3247414 483501.1408 0.028217023 0.013678365 1.68E-08 7.774993574 -0.071740015 T(ph)KSPTDDEVTPSAVVR ddPTM_A459_MK2206_30min_R2 1 TKSPTDDEVTPSAVVR 16 1 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 T(0.498)KS(0.498)PT(0.004)DDEVTPSAVVR 78.902 0.035309 20396000 12274 20087 16105 20895 19472 12946 21319 19019 5001.1 23379 TRUE FALSE 13213.70688 19089.50879 16641.93266 19187.81166 18707.43144 13438.6691 18519.78969 21504.8486 5436.086638 22616.14514 0.584259908 0.844065541 0.735843025 0.848412121 0.827171533 0.594206883 0.818874727 0.95086269 0.240363095 1 14.46506543 T(ph)KSSDDLLAGMAGGVTVTNGVK ddPTM_A459_MK2206_30min_R2 2 TKSSDDLLAGMAGGVTVTNGVK 22 1 F8WAN1;Q69YQ0-2;Q69YQ0;C9J8U1 F8WAN1 SPECC1L-ADORA2A;SPECC1L Cytospin-A 1 T(0.333)KS(0.333)S(0.333)DDLLAGMAGGVTVTNGVK;T(0.333)KS(0.333)S(0.333)DDLLAGMAGGVTVTNGVK 179.76 4.34E-16 10456800 101121 135294 110456 105083 110696 79893 138974 110145 83489 103483 TRUE FALSE 108862.9015 128575.4967 114138.5479 96497.38276 106349.5188 82933.3841 120726.5469 124541.3297 90750.72231 100106.3582 1.087472399 1.284388914 1.140172812 0.963948589 1.062365276 0.828452714 1.205982807 1.244090105 0.90654304 1 16.61117408 -5.560524601 7.734079509 1.041151772 1.192528891 0.208245718 0.126215874 0.328754295 56.76310896 0.035007163 0.061326052 2.75E-06 5.560524601 0.151377119 T(ph)KSVSSMSEFESLLDCSPYLAGGDAR ddPTM_A459_MK2206_30min_R1 1 TKSVSSMSEFESLLDCSPYLAGGDAR 26 1 O94964-2;H0YDM2;O94964;O94964-3;X6R3R3;O94964-4 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 T(0.269)KS(0.172)VS(0.206)S(0.083)MS(0.269)EFESLLDCSPYLAGGDAR 92.716 2.83E-05 18733000 2761.5 2477.4 2345.7 2321.8 2547.3 2267.5 2428.3 2492.5 2213.7 1536.5 TRUE FALSE 2526.619924 2316.12081 2186.480419 2500.625438 2445.835647 2395.88389 2266.312538 2470.708335 2443.822037 1726.85322 1.463135311 1.341237798 1.266164602 1.448082216 1.416354105 1.387427642 1.312394424 1.430757581 1.415188048 1 10.75392975 -10.64091505 5.220019703 0.999990448 1.383665987 0.791471059 0.059535794 6.75E-06 1.14E-06 0.058803217 0.01426152 2.29E-11 10.64091505 0.383675538 T(ph)LCGTPNYIAPEVLSK ddPTM_A459_MK2206_30min_R2 1 TLCGTPNYIAPEVLSK 16 0 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1 1 T(1)LCGTPNYIAPEVLSK 178.99 7.10E-09 0 9601.9 18110 11494 23506 19271 35123 13155 13860 21896 11862 TRUE FALSE 10337.02885 17210.68373 11877.20422 21585.48461 18514.32371 36459.63038 11427.7327 15671.54959 23800.4745 11474.94391 0.900834804 1.499849051 1.035055536 1.881097178 1.613456576 3.177325367 0.995885713 1.365719058 2.074125563 1 13.48619948 -5.763468266 24.99374432 1.769800664 1.180706671 0.160719303 0.605539749 97.58733905 1202200.266 0.168711972 0.264982826 1.72E-06 5.763468266 -0.589093992 T(ph)LGTPTQPGSTPR ddPTM_A459_MK2206_30min_R2 2 TLGTPTQPGSTPR 13 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 T(0.655)LGT(0.344)PT(0.001)QPGSTPR;T(0.869)LGT(0.125)PT(0.006)QPGSTPR 152 0.0010531 43293000 96944 127039 113647 135887 124799 124807 141556 105890 106237 122746 TRUE FALSE 104366.1072 120730.428 117435.9343 124784.5974 119898.7642 129556.6178 122969.5272 119730.1866 115477.3022 118740.8081 0.878940517 1.016755991 0.989010738 1.050899008 1.009751964 1.091087554 1.035613023 1.008332253 0.972515718 1 16.85745631 -4.757156597 5.122302471 1.022608782 0.869802891 0.634446734 0.031908785 0.115237896 8.254695308 0.008251547 0.063456716 1.75E-05 4.757156597 -0.152805891 T(ph)LLEQNMESK ddPTM_A459_MK2206_30min_R1 1 TLLEQNMESK 10 0 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;H7C2C6;A0A2R8Y885;A0A2R8YDS8;H0Y470;A0A2R8Y5D7;H0Y7U8;A0A2R8Y4W8;A0A2R8YG73;A0A2R8Y802;A0A2R8Y4X4 Q3V6T2 CCDC88A Girdin 1 T(1)LLEQNMESK 82.029 0.044116 0 1257.7 2123.2 1613.8 1774.5 1096.5 972.12 1269.9 1315 1627 1863.6 TRUE FALSE 1150.726011 1984.979294 1504.259752 1911.172297 1052.824083 1027.160594 1185.187288 1303.503094 1796.132472 2094.476837 0.549409757 0.947720814 0.718203097 0.912481945 0.502666854 0.490413919 0.565863163 0.622352594 0.857556618 1 11.03237421 -8.477744796 3.570636979 0.998197225 0.669547117 0.349060092 0.150607112 0.251778814 7.069910747 0.155522012 0.041056309 3.33E-09 8.477744796 -0.328650108 T(ph)LMMEQRSQMLRHMRLSK ddPTM_A459_MK2206_30min_R2 1 TLMMEQRSQMLRHMRLSK 18 3 B3KXX3;Q9UHW9-6;Q9UHW9-5;Q9UHW9-2;Q9UHW9-3;Q9UHW9-4;Q9UHW9 B3KXX3 SLC12A6 Solute carrier family 12 member 6 1 T(0.97)LMMEQRS(0.03)QMLRHMRLSK 42.338 0.045709 223420000 555960 246650 447750 221800 228530 124590 398610 311640 198090 496530 TRUE FALSE 598524.7251 234401.7197 462677.7615 203678.2305 219556.7639 129331.3598 346272.0282 352372.418 215319.5101 480328.2668 1.246074334 0.488003176 0.963253245 0.424039651 0.457097321 0.269256191 0.720907038 0.733607498 0.448275742 1 18.87366119 -3.182314 1.851754338 0.590766324 199.9970675 0.385246437 0.232834205 429.4382248 6.133606982 0.061314777 360282.9848 0.000657183 3.182314 199.4063011 T(ph)LNMTTSPEEK ddPTM_A459_MK2206_30min_R1 1 TLNMTTSPEEK 11 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 T(0.901)LNMT(0.016)T(0.059)S(0.025)PEEK 120.86 0.01078 108170000 8146.9 8796.7 9869 7211 6572.1 5955.8 7146.3 7374.6 7776.4 6947.5 TRUE FALSE 7453.963374 8224.033231 9199.119777 7766.392469 6310.31934 6293.012249 6669.583366 7310.12465 8584.784608 7808.208751 0.954631672 1.053254785 1.178134457 0.994644574 0.808164784 0.805948259 0.854175852 0.936210197 1.099456339 1 12.93077591 -6.004147985 24.80415173 0.9050459 1.065341392 0.305656875 0.097314938 188.0932513 1124780.242 0.02928591 0.04229413 9.90E-07 6.004147985 0.160295492 T(ph)LPS(ph)MLILSGLT(ph)AGMLMTDAGRK ddPTM_A459_MK2206_30min_R2 1 TLPSMLILSGLTAGMLMTDAGRK 23 1 H0YC22;Q9NUQ2 H0YC22 AGPAT5 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon 3 T(0.98)LPS(0.94)MLILS(0.129)GLT(0.942)AGMLMT(0.009)DAGRK 49.34 0.040126 0 4280.2 10618 6261.3 12711 7861.1 7604.1 7426.2 7195.9 8458.1 5980.6 TRUE FALSE 4607.895403 10090.72556 6470.048617 11672.47064 7552.433715 7893.479354 6451.13102 8136.428837 9193.770249 5785.453512 0.796462264 1.744154635 1.118330413 2.017554996 1.305417752 1.364366568 1.115060558 1.40635973 1.589118335 1 12.49821434 T(ph)LSADASVNTLPVVVSR ddPTM_A459_MK2206_30min_R1 2 TLSADASVNTLPVVVSR 17 0 Q92615;H0Y4V9;H0Y641 Q92615 LARP4B La-related protein 4B 1 T(0.69)LS(0.31)ADASVNTLPVVVSR;T(0.893)LS(0.107)ADASVNTLPVVVSR 198.67 1.60E-07 27889000 5256.8 4864.5 5047.6 3587.3 4244.9 3443.4 4455.3 4188.6 4396.7 3561.6 TRUE FALSE 4809.681555 4547.820166 4704.982975 3863.594468 4075.816644 3638.362332 4158.095066 4151.979512 4853.752699 4002.837897 1.201567907 1.136148973 1.17541182 0.965213823 1.018231752 0.90894571 1.038786774 1.037258969 1.212577882 1 11.96680748 -5.748954321 24.88434437 1.022761165 1.16755357 0.44308086 0.074502768 208.6615616 415885.7119 0.020927765 0.035925138 1.78E-06 5.748954321 0.144792404 T(ph)LSADASVNTLPVVVSR ddPTM_A459_MK2206_30min_R2 1 TLSADASVNTLPVVVSR 17 0 Q92615;H0Y4V9;H0Y641 Q92615 LARP4B La-related protein 4B 1 T(0.872)LS(0.128)ADASVNTLPVVVSR 121.45 0.003338 4562200 11047 18722 15285 18928 14257 15765 18869 17036 19816 17974 TRUE FALSE 11892.76681 17792.2927 15794.59427 17381.52185 13697.19854 16364.94812 16391.47763 19262.66369 21539.55986 17387.50985 0.683983326 1.023280093 0.908387366 0.999655615 0.787760793 0.941189869 0.942715649 1.107844876 1.238794977 1 14.08576371 -7.727521391 3.184339607 1.137271259 0.900368912 0.4652467 0.107428434 0.20864456 4.310236788 0.058881281 0.028536892 1.87E-08 7.727521391 -0.236902346 T(ph)LSASAAEVAPR ddPTM_A459_MK2206_30min_R2 1 TLSASAAEVAPR 12 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 T(0.629)LS(0.35)AS(0.021)AAEVAPR 128.36 0.0057572 6839300 21526 22973 19092 28597 26043 16971 18918 13340 13316 19844 TRUE FALSE 23174.04711 21832.19423 19728.51775 26260.53362 25020.42096 17616.8433 16434.04388 15083.5838 14474.20161 19196.49191 1.207202192 1.137301249 1.027714743 1.367986075 1.303385071 0.9177116 0.856096205 0.785746889 0.754002433 1 14.22855507 -6.882171758 4.990578819 0.838525253 1.202475405 0.732666646 0.104840218 0.116070084 4.588987231 0.039963892 0.035219773 1.31E-07 6.882171758 0.363950152 T(ph)LSDESICSNR ddPTM_A459_MK2206_30min_R1 1 TLSDESICSNR 11 0 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 T(0.917)LS(0.042)DES(0.041)ICSNR 184.98 5.17E-05 14794000 1163.7 1638.3 1583.5 1274.3 1664.1 1505.5 1749.1 1601.8 1466.6 1613.6 TRUE FALSE 1064.721204 1531.646372 1476.016432 1372.446807 1597.815373 1590.740109 1632.42073 1587.795631 1619.058318 1813.50495 0.587106864 0.844577994 0.813902621 0.756792424 0.881064798 0.877163368 0.900146829 0.875539728 0.892778549 1 10.82456497 -2.881367117 0.258756927 0.950082173 4.42E-34 0.702918329 0.056598779 15.67064099 0.398263248 0.071474142 5.674866757 0.001314114 2.881367117 -0.950082173 T(ph)LSDESIYNSQR ddPTM_A459_MK2206_30min_R1 2 TLSDESIYNSQR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 T(0.851)LS(0.138)DES(0.012)IYNSQR;T(0.852)LS(0.136)DES(0.011)IYNSQR 201.08 0.0001984 15642200 2491.41 2380.65 2534 2282.92 2705.81 2300.82 2616.5 2374.39 2346.11 2369.84 TRUE FALSE 2279.502497 2225.669252 2361.99914 2458.750894 2598.031858 2431.09044 2441.958059 2353.630959 2589.99653 2663.433671 0.855851047 0.835639076 0.886824841 0.923150789 0.97544455 0.912765528 0.916845832 0.883682963 0.972427644 1 11.37907164 -1.522878745 0.216402972 0.968646129 0.287571278 0.577970767 0.033001795 42.79845748 0.542129827 0.057462566 10.12617239 0.03 1.522878745 -0.681074851 T(ph)LSDESIYNSQR ddPTM_A459_MK2206_30min_R2 3 TLSDESIYNSQR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 T(0.964)LS(0.034)DES(0.001)IYNSQR;T(0.997)LS(0.003)DESIYNSQR;T(0.997)LS(0.003)DESIYNSQR 245.5 7.61E-14 92856000 54962 63590 52282 73374 57267 50960 74145 46336 53414 61178 TRUE FALSE 59169.93298 60432.21307 54025.05579 67379.10949 55018.40984 52899.31851 64409.67244 52392.2743 58059.85317 59181.76687 0.999800042 1.02112891 0.912866557 1.138511286 0.929651356 0.893844867 1.088336423 0.885277292 0.981042916 1 15.85286515 T(ph)LSDESLCSGR ddPTM_A459_MK2206_30min_R2 3 TLSDESLCSGR 11 0 O60292;M0R2Q7 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.968)LS(0.028)DES(0.004)LCSGR;T(0.663)LS(0.336)DES(0.001)LCSGR;T(0.923)LS(0.025)DES(0.051)LCSGR 193.62 4.76E-05 339958000 73167 85547 84895 74201 85994 79950 96016 80223 77322 75328 TRUE FALSE 78768.72178 81298.86038 87725.35693 68138.54094 82617.44347 82992.55327 83408.98386 90708.42155 84047.32779 72870.05353 1.080947769 1.115669009 1.203860196 0.935069176 1.133764001 1.138911655 1.144626356 1.244796966 1.153386387 1 16.15303843 -6.504944112 24.9235223 1.150403526 1.08718756 0.073151553 0.083251614 1658.384812 2304638.915 0.02581967 0.02871577 3.13E-07 6.504944112 -0.063215965 T(ph)LSFDTSK ddPTM_A459_MK2206_30min_R2 2 TLSFDTSK 8 0 Q7L804;Q7L804-2 Q7L804 RAB11FIP2 Rab11 family-interacting protein 2 1 T(0.958)LS(0.042)FDTSK;T(0.962)LS(0.038)FDTSK 142.98 0.0050992 51748000 253680 228925 238230 209749 221288 191975 258510 157617 220372 262870 TRUE FALSE 273101.9358 217556.9174 246172.4693 192611.8357 212599.1212 199280.7431 224567.3265 178218.0831 239539.5582 254292.5734 1.073967408 0.855537834 0.968067868 0.757441844 0.836041408 0.783667177 0.883106115 0.700838726 0.941984089 1 17.9561298 -1.600375956 1.005368435 0.836764784 199.9998962 0.31522603 0.091611441 1511.788116 2.386788141 0.026553456 693192.8328 0.025097129 1.600375956 199.1631314 T(ph)LSGSGSGSGSSYSGSSSR ddPTM_A459_MK2206_30min_R1 1 TLSGSGSGSGSSYSGSSSR 19 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 T(0.989)LS(0.011)GSGSGSGSSYSGSSSR 325.33 3.07E-135 4918000 962.26 832.27 754.05 650.27 896.63 960.23 974.38 1092.5 718.75 816.71 TRUE FALSE 880.414734 778.0890717 702.8671869 700.3539081 860.9153285 1014.597393 909.3808881 1082.948388 793.4666346 917.8902006 0.959172168 0.847692972 0.765742119 0.763004015 0.937928445 1.105358127 0.990729487 1.179823455 0.864446133 1 9.842177776 -6.514701481 5.279148538 1.036400006 0.831290724 0.497813487 0.091662051 0.138398644 12.17077887 0.029167693 0.031053934 3.06E-07 6.514701481 -0.205109281 T(ph)LSMIEEEIR ddPTM_A459_MK2206_30min_R1 6 TLSMIEEEIR 10 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 T(0.969)LS(0.031)MIEEEIR;T(0.98)LS(0.02)MIEEEIR;T(0.966)LS(0.034)MIEEEIR;T(0.888)LS(0.112)MIEEEIR;T(0.939)LS(0.061)MIEEEIR;T(0.657)LS(0.343)MIEEEIR 211.63 0.00017921 156880100 9821.48 9548.34 10749.12 9484.95 10995.09 8958.44 9787.05 9109.84 8116.54 6589.18 TRUE FALSE 8986.111551 8926.741331 10019.49968 10215.48249 10557.13228 9465.659131 9134.173752 9030.193629 8960.283378 7405.497364 1.213437951 1.205420904 1.352981331 1.379445835 1.425580452 1.278193572 1.233431504 1.219390567 1.209950249 1 12.85438092 -8.686568133 0.753050801 1.001524766 1.310788094 0.642037195 0.067582066 0.632029227 0.762358019 0.076307005 0.028072928 2.06E-09 8.686568133 0.309263328 T(ph)LSMIEEEIR ddPTM_A459_MK2206_30min_R2 1 TLSMIEEEIR 10 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 T(0.847)LS(0.153)MIEEEIR 158.56 0.0011069 11567000 4304.5 4744.9 4024.5 4415 4629.5 3136.9 3546.5 3554 3532.8 3615.5 TRUE FALSE 4634.05583 4509.275166 4158.674821 4054.280377 4447.722569 3256.276928 3080.84029 4018.520003 3840.076558 3497.526531 1.324952302 1.289275471 1.189033102 1.159185024 1.271676577 0.931022795 0.880862593 1.148960549 1.097940651 1 11.77211929 -6.753495251 24.99969033 1.012886427 1.241103423 0.664193552 0.083520228 124.8558604 392913.2006 0.030607798 0.030085938 1.76E-07 6.753495251 0.228216996 T(ph)LSPEFNER ddPTM_A459_MK2206_30min_R1 1 TLSPEFNER 9 0 Q9BSJ8;Q9BSJ8-2 Q9BSJ8 ESYT1 Extended synaptotagmin-1 1 T(0.911)LS(0.089)PEFNER 126.03 0.011467 5229900 2520.9 2105.1 2137.6 1840.3 2861.6 2131.2 2863.3 2272.5 2444.1 2714.1 TRUE FALSE 2306.484217 1968.057607 1992.505668 1982.040225 2747.616412 2251.866702 2672.294481 2252.631772 2698.172941 3050.343198 0.75613925 0.64519219 0.653207045 0.649776139 0.900756483 0.738233882 0.876063547 0.738484697 0.884547333 1 11.57475586 -8.058345918 0.192786038 1.082938975 0.58540236 0.596655914 0.074662238 2.151239769 0.428414462 0.447688851 0.41421038 8.74E-09 8.058345918 -0.497536615 T(ph)LSPTPSAEGYQDVR ddPTM_A459_MK2206_30min_R1 3 TLSPTPSAEGYQDVR 15 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(1)LSPTPSAEGYQDVR;T(0.871)LS(0.129)PTPSAEGYQDVR;T(0.483)LS(0.439)PT(0.076)PS(0.001)AEGYQDVR 279.71 9.01E-55 297370400 4860.8 4904.66 5103.33 4372.58 5643.4 4789.52 4970.44 4896.7 3814.48 3657.38 TRUE FALSE 4447.363435 4585.365743 4756.930178 4709.356869 5418.611428 5060.698483 4638.871017 4853.888668 4211.008846 4110.483846 1.081956188 1.11552944 1.157267698 1.145694046 1.318241752 1.231168561 1.128546222 1.180855795 1.024455758 1 12.00509251 -8.303984943 4.511366054 1.003590982 1.172813928 0.503373475 0.062678122 0.189546621 8.562746478 0.063388756 0.017425211 4.97E-09 8.303984943 0.169222946 T(ph)LSPTPSAEGYQDVR ddPTM_A459_MK2206_30min_R2 3 TLSPTPSAEGYQDVR 15 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(0.955)LS(0.045)PTPSAEGYQDVR;T(0.648)LS(0.352)PTPSAEGYQDVR;T(0.687)LS(0.312)PT(0.001)PSAEGYQDVR 247.9 1.57E-27 476105800 158656 199942 159975 199161 177544 174175 218038 155995 171838 169531 TRUE FALSE 170802.8253 190013.171 165308.4867 182888.9092 170572.7305 180803.3517 189409.3487 176384.0821 186784.1586 163999.2174 1.041485613 1.158622426 1.007983387 1.115181598 1.040082588 1.102464723 1.154940565 1.075517828 1.138933232 1 17.3233294 -6.930454473 24.99999118 1.102937639 1.075719969 0.024200712 0.055505213 158.7894251 57078.26543 0.018214859 0.016063996 1.17E-07 6.930454473 -0.02721767 T(ph)LSSPSLQTDGIAATPVPPPPPPK ddPTM_A459_MK2206_30min_R2 2 TLSSPSLQTDGIAATPVPPPPPPK 24 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 T(0.475)LS(0.394)S(0.099)PS(0.031)LQT(0.001)DGIAATPVPPPPPPK;T(0.406)LS(0.406)S(0.131)PS(0.051)LQT(0.005)DGIAATPVPPPPPPK 120.72 2.03E-07 12522000 54494 69914.3 69662.9 90824.5 93108.5 97998.7 76829.2 51689.8 78704.1 71225 TRUE FALSE 58666.10254 66442.45753 71985.42632 83403.84782 89452.59246 101728.1092 66741.43375 58445.83434 85549.64035 68900.93408 0.851455838 0.964318676 1.04476706 1.210489363 1.298278371 1.476440204 0.968657895 0.848258955 1.241632519 1 16.07223592 -5.266991993 2.043086405 1.153386171 0.870776945 0.243712581 0.170910023 0.577818698 4.374164446 0.052933635 0.204893206 5.41E-06 5.266991993 -0.282609226 T(ph)LSSPSNRPSGETSVPPPPAAPPFLPVGR ddPTM_A459_MK2206_30min_R2 1 TLSSPSNRPSGETSVPPPPAAPPFLPVGR 29 1 H3BUF6 H3BUF6 ATXN2L 1 T(0.454)LS(0.084)S(0.454)PS(0.003)NRPS(0.002)GET(0.001)SVPPPPAAPPFLPVGR 107.3 1.92E-10 6319400 2329.8 4817.6 2243.4 4095.2 4345 2042.7 5820.4 1527.7 4776.8 3638.5 TRUE FALSE 2508.171279 4578.364989 2318.193836 3760.60906 4174.393468 2120.43638 5056.174488 1727.375635 5192.27743 3519.776043 0.712593997 1.300754631 0.658619699 1.068422824 1.185982692 0.602435028 1.436504603 0.490762939 1.475172672 1 11.78126792 -8.299217272 24.99697876 1.23758605 0.954031274 0.125224538 0.318838016 1345.6913 890409.3568 0.275938197 0.071252799 5.02E-09 8.299217272 -0.283554776 T(ph)LSSSAQEDIIR ddPTM_A459_MK2206_30min_R2 4 TLSSSAQEDIIR 12 0 Q9H788;Q9H788-2 Q9H788 SH2D4A SH2 domain-containing protein 4A 1 T(0.896)LS(0.035)S(0.035)S(0.035)AQEDIIR;T(0.985)LS(0.005)S(0.005)S(0.005)AQEDIIR;T(0.902)LS(0.047)S(0.047)S(0.005)AQEDIIR;T(0.932)LS(0.05)S(0.009)S(0.009)AQEDIIR 203.85 9.68E-05 335895000 334947 384264 414765 371831 332967 302223 387549 237081 275442 330238 TRUE FALSE 360590.7999 365182.0085 428593.0581 341451.2179 319893.0426 313724.308 336663.3508 268068.3007 299399.4473 319462.3611 1.128742674 1.143114348 1.34160737 1.068830822 1.001348145 0.982038407 1.053843556 0.839123269 0.937197879 1 18.28528644 -6.050792976 3.492223375 0.96674467 1.199990596 0.654374965 0.075962419 0.150923336 3.706652637 0.023810202 0.033322634 8.90E-07 6.050792976 0.233245926 T(ph)LSSSSMDLSR ddPTM_A459_MK2206_30min_R2 1 TLSSSSMDLSR 11 0 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 T(0.803)LS(0.098)S(0.098)S(0.001)SMDLSR 271.21 1.72E-30 93338000 89261 109300 93234 97747 110110 105970 98244 75592 90281 86381 TRUE FALSE 96094.89079 103872.3209 96342.37503 89760.75742 105786.5281 110002.7626 85344.44479 85472.13395 98133.47819 83562.39504 1.149977699 1.243051027 1.152939369 1.074176457 1.265958546 1.316414669 1.021325977 1.022854047 1.17437369 1 16.35056622 -7.285265447 24.95488601 1.05654292 1.197439952 0.459928039 0.077339115 786.6787811 823946.0821 0.033654356 0.022704024 5.18E-08 7.285265447 0.140897032 T(ph)LT(ph)VDGEDT(ph)TLVVVDT(ph)WEAEKLDK ddPTM_A459_MK2206_30min_R2 1 TLTVDGEDTTLVVVDTWEAEKLDK 24 1 O75628 O75628 REM1 GTP-binding protein REM 1 4 T(0.992)LT(0.992)VDGEDT(0.537)T(0.487)LVVVDT(0.993)WEAEKLDK 40.81 0.032806 2208600 12990 13159 15322 16844 17423 14291 16808 13599 13329 16024 TRUE FALSE 13984.52439 12505.54319 15832.82783 15467.79132 16738.88548 14834.85402 14601.08941 15376.43599 14488.33233 15501.13819 0.902161133 0.806749997 1.02139776 0.997848747 1.0798488 0.957017081 0.9419366 0.991955288 0.934662484 1 13.92008653 -5.265824046 24.9972772 0.990807387 0.854455562 0.594374389 0.044981756 229.3702382 1307661.961 0.012021912 0.026463616 5.42E-06 5.265824046 -0.136351826 T(ph)LY(ph)GIY(ph)YK ddPTM_A459_MK2206_30min_R1 1 TLYGIYYK 8 0 A0A087WZW1;P04118 A0A087WZW1 CLPS Colipase 3 T(1)LY(1)GIY(0.999)Y(0.001)K 69.198 0.020955 0 635.18 402.75 439.32 621.99 398.02 514.18 439.48 544.93 487.2 466.82 TRUE FALSE 581.1546055 376.5309018 409.5001824 669.8957776 382.1660206 543.2924273 410.1630911 540.1657345 537.8461835 524.6531859 1.107692893 0.717675813 0.780515955 1.276835433 0.728416468 1.035526786 0.781779473 1.029567244 1.025146131 1 9.035220256 T(ph)LYGFGG ddPTM_A459_MK2206_30min_R1 1 TLYGFGG 7 0 P62805 P62805 HIST1H4A Histone H4 1 T(0.999)LY(0.001)GFGG 69.423 0.029202 3621400 7014.8 5734.1 4497.4 5983.8 4810.5 5917.6 5577.1 3413.7 5469.5 8932.7 TRUE FALSE 6418.154424 5360.809048 4192.129018 6444.673313 4618.887599 6252.649398 5205.061835 3383.854381 6038.074098 10039.35031 0.639299778 0.533979678 0.417569752 0.641941272 0.460078337 0.622814147 0.518466003 0.3370591 0.601440722 1 13.29337829 -8.553082563 22.87090713 1.000000002 0.520217912 0.700281417 0.093496563 1953.374339 1479130.036 0.088229009 0.022780632 2.80E-09 8.553082563 -0.479782091 T(ph)MAMPT(ph)QIPADGDTQK ddPTM_A459_MK2206_30min_R1 1 TMAMPTQIPADGDTQK 16 0 Q6ZU15 Q6ZU15 Sep-14 Septin-14 2 T(1)MAMPT(1)QIPADGDTQK 63.694 0.035758 0 462.49 507.16 499.99 386.11 502.28 388.46 618.67 405.72 415.7 495 TRUE FALSE 423.1527969 474.1437918 466.0520719 415.8482591 482.273124 410.4542695 577.3996531 402.1728328 458.9135026 556.3243371 0.76062248 0.852279435 0.837734467 0.747492481 0.866892012 0.737796717 1.037883146 0.72291073 0.824902799 1 9.119782409 T(ph)MDASER ddPTM_A459_MK2206_30min_R2 1 TMDASER 7 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 1 T(1)MDASER 131.11 0.0094866 8687800 37875 39706 46757 44967 37522 41632 43083 46415 42468 42595 TRUE FALSE 40774.73912 37734.25778 48315.85504 41293.05226 36048.69775 43216.33493 37426.15035 52481.59987 46161.78988 41205.12864 0.989554953 0.915766047 1.172568965 1.002133803 0.874859488 1.048809611 0.908288642 1.273666692 1.120292337 1 15.33053629 -7.751498045 24.99974898 1.147734657 0.990387791 0.297055582 0.100416521 221.8698275 557945.6905 0.047001585 0.026716458 1.77E-08 7.751498045 -0.157346866 T(ph)MSDGNPTPTGATIISATGASALPLCPSPAPHSHLPR ddPTM_A459_MK2206_30min_R2 1 TMSDGNPTPTGATIISATGASALPLCPSPAPHSHLPR 37 0 Q5TCX8;Q5TCX8-3 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 T(0.465)MS(0.465)DGNPT(0.069)PTGATIISATGASALPLCPSPAPHSHLPR 57.325 0.00027155 3625200 1452.4 5496.4 3163.3 6471.6 5854 10614 5796.4 5617.9 5876 5503 TRUE FALSE 1563.596861 5223.456769 3268.762843 5942.849578 5624.142546 11017.92321 5035.325717 6352.178819 6387.083859 5323.437561 0.293719395 0.981218754 0.614032344 1.116355646 1.056486994 2.069700843 0.945878609 1.193247549 1.199804409 1 12.37814244 -5.888273935 1.972680954 1.281131395 0.638036872 0.39921624 0.334931173 0.341168028 2.703005227 0.105012815 0.184703343 1.29E-06 5.888273935 -0.643094523 T(ph)MSQGEITK ddPTM_A459_MK2206_30min_R1 1 TMSQGEITK 9 0 H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BV44 H3BRD5 MYO9A Unconventional myosin-IXa 1 T(0.891)MS(0.108)QGEIT(0.001)K 105.25 0.0324 6948500 2154.7 2637 2531.5 2351.2 2182 2257.2 2251 2243.3 2041.9 1894 TRUE FALSE 1971.43145 2465.330821 2359.668833 2532.289831 2095.08632 2385.000713 2100.839897 2223.687065 2254.162812 2128.643019 0.9261447 1.158170158 1.108531967 1.189626353 0.984235638 1.12043245 0.98693857 1.044650063 1.058967047 1 11.05571831 -6.283475433 24.99672431 1.036884625 1.101008713 0.14288596 0.074772804 1551.827465 1760320.629 0.022515912 0.025552337 5.21E-07 6.283475433 0.064124087 T(ph)MSSDDEDCSAK ddPTM_A459_MK2206_30min_R1 1 TMSSDDEDCSAK 12 0 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 T(0.628)MS(0.186)S(0.186)DDEDCSAK 246.63 7.97E-18 9749900 2895.3 3007 3507.4 2818 2944.6 2608.2 3198.5 2678 2345.2 2737.5 TRUE FALSE 2649.039531 2811.243753 3269.32746 3035.042848 2827.310347 2755.87403 2985.133901 2654.586528 2588.991932 3076.642167 0.861016455 0.91373764 1.062628438 0.986478987 0.91895976 0.895740837 0.970257098 0.862819393 0.841499203 1 11.58714094 -6.413856705 6.066914466 0.908841183 0.960326647 0.083776373 0.064883431 0.556665766 26.64623477 0.021331556 0.024148845 3.86E-07 6.413856705 0.051485464 T(ph)NQLLQDIK ddPTM_A459_MK2206_30min_R2 1 TNQLLQDIK 9 0 G3V5X4;A0A0A0MRE3;Q8WXH0;Q8WXH0-2;A0A0C4DGK3;Q8WXH0-7 G3V5X4 SYNE2 Nesprin-2 1 T(1)NQLLQDIK 114.51 0.01986 6655200 24426 26940 21436 29815 24298 22119 29288 21740 17684 20666 TRUE FALSE 26296.07334 25602.19877 22150.66554 27379.01913 23343.93843 22960.75404 25442.45042 24581.49264 19222.12235 19991.67011 1.315351504 1.280643319 1.107994751 1.369521354 1.167683255 1.148516053 1.272652574 1.229586748 0.96150658 1 14.28711138 -8.258007689 23.80252088 0.980753246 1.234095346 0.647302807 0.075493764 85.73896503 594714.9862 0.054992023 0.018836486 5.52E-09 8.258007689 0.2533421 T(ph)NRTSQDYDQLPSCSDGSQAPARPPKPR ddPTM_A459_MK2206_30min_R2 1 TNRTSQDYDQLPSCSDGSQAPARPPKPR 28 3 Q13191 Q13191 CBLB E3 ubiquitin-protein ligase CBL-B 1 T(0.39)NRT(0.288)S(0.288)QDY(0.034)DQLPSCSDGSQAPARPPKPR 60.939 0.0018134 6429100 7355.9 8090 8610.3 8551.9 8874.9 9160.9 10274 6391.3 6774.1 7952.8 TRUE FALSE 7919.07336 7688.262364 8897.363105 7853.182414 8526.426833 9509.524469 8925.011459 7226.664855 7363.298973 7693.300787 1.029346646 0.99934509 1.156507896 1.020781928 1.108292405 1.2360786 1.160101718 0.939345159 0.957105302 1 12.909387 -7.770590989 24.99949941 0.961168879 1.102014185 0.442970773 0.069840725 200.1762381 546812.9352 0.040998077 0.020127763 1.70E-08 7.770590989 0.140845306 T(ph)NSMGSATGPLPGTK ddPTM_A459_MK2206_30min_R2 1 TNSMGSATGPLPGTK 15 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 T(0.778)NS(0.148)MGS(0.064)AT(0.01)GPLPGTK 178 4.59E-05 16632000 28722 40674 36983 37182 39350 37326 68511 65532 63117 91395 TRUE FALSE 30920.9784 38654.18831 38215.99476 34144.11166 37804.92128 38746.46709 59515.4234 74097.25741 68606.80257 88412.78863 0.349734228 0.437201325 0.432245101 0.386189738 0.427595621 0.438245051 0.673154012 0.838083026 0.775982792 1 16.43196745 -7.546590039 1.239512719 0.910454088 0.398987574 0.938115079 0.053704267 0.104651962 0.301106022 0.039781752 0.018042592 2.84E-08 7.546590039 -0.511466515 down T(ph)NSPGFQK ddPTM_A459_MK2206_30min_R1 1 TNSPGFQK 8 0 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 T(0.616)NS(0.384)PGFQK 99.53 0.043442 17542000 4346.9 4565.2 4427.9 3524.5 3398.9 2908.8 3500.3 3736.6 3069.3 3478.1 TRUE FALSE 3977.173329 4268.00465 4127.346485 3795.957601 3263.514616 3073.493742 3266.801374 3703.9313 3388.364719 3908.993286 1.017441842 1.09184241 1.05585919 0.971083172 0.834873426 0.786262221 0.835714245 0.947540973 0.866812622 1 11.93258139 -5.998494486 3.186547726 0.869767043 1.057995829 0.637310449 0.059622397 0.151526122 3.190066416 0.018388996 0.027063637 1.00E-06 5.998494486 0.188228786 T(ph)NSSSSSPVVLK ddPTM_A459_MK2206_30min_R1 1 TNSSSSSPVVLK 12 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4;Q7Z589-2 Q7Z589 EMSY;C11orf30 Protein EMSY 1 T(0.867)NS(0.075)S(0.052)S(0.005)S(0.001)SPVVLK 137.73 0.0030405 21049000 1999.8 2238.9 2186.6 1813.5 1364.6 1247.5 2055.7 2020.2 1766 1776.3 TRUE FALSE 1829.706509 2093.147203 2038.179684 1953.176084 1310.245092 1318.132372 1918.568004 2002.537604 1949.58202 1996.361454 0.916520655 1.048481075 1.020947224 0.97836796 0.656316565 0.660267392 0.961032382 1.003093703 0.976567653 1 10.96315724 -6.028691878 24.7406434 0.86504141 1.000470343 0.167630054 0.124175267 1095.869398 944953.2145 0.040762356 0.052738559 9.36E-07 6.028691878 0.135428933 T(ph)NSSSSSPVVLK ddPTM_A459_MK2206_30min_R2 2 TNSSSSSPVVLK 12 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4;Q7Z589-2 Q7Z589 EMSY;C11orf30 Protein EMSY 1 T(0.511)NS(0.15)S(0.337)S(0.002)SSPVVLK;T(0.578)NS(0.377)S(0.035)S(0.011)SSPVVLK 132.51 0.0043815 31271000 83832 89694 83068 81595 70425 55829 94395 70700 69034 84679 TRUE FALSE 90250.24238 85239.92639 85837.44566 74928.42749 67659.76064 57953.61172 82000.82311 79940.73275 75038.45254 81915.93116 1.101742251 1.040578129 1.047872428 0.914699088 0.825965837 0.707476689 1.00103633 0.975887494 0.916042233 1 16.32185644 -5.760698802 4.090069676 0.895794419 1.064872734 0.422608011 0.084302811 0.21137262 8.011030659 0.025847527 0.043249072 1.74E-06 5.760698802 0.169078315 T(ph)NTPQGVLPSSQLK ddPTM_A459_MK2206_30min_R2 1 TNTPQGVLPSSQLK 14 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 T(0.807)NT(0.193)PQGVLPSSQLK 185.86 0.00018924 22188000 119940 112080 105350 86453 81098 68286 123880 96323 98987 122680 TRUE FALSE 129122.6986 106514.2702 108862.3164 79389.51335 77913.68504 70884.67158 107614.4072 108912.7468 107596.7103 118676.9616 1.088018237 0.8975143 0.91729949 0.668954717 0.656519041 0.59729092 0.906784313 0.917724429 0.906635196 1 16.85668037 -10.21557503 14.3833782 0.999999994 0.830361974 0.096961596 0.144339973 0 0 0.153777654 0.037296559 6.09E-11 10.21557503 -0.16963802 T(ph)NTPVKEDWNVR ddPTM_A459_MK2206_30min_R1 1 TNTPVKEDWNVR 12 1 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347;A0A494C0Q7 A0A494C1K3 GTF2I General transcription factor II-I 1 T(0.782)NT(0.218)PVKEDWNVR 128.21 0.025732 8513300 2768.8 3648.7 2933.5 2911.5 1857.7 1662.4 1673.6 1960.2 2956.5 2449.2 TRUE FALSE 2533.29902 3411.168967 2734.382193 3135.744234 1783.703875 1756.523651 1561.957198 1943.062178 3263.838755 2752.625387 0.920321026 1.239241992 0.993372439 1.139183069 0.648000954 0.638126663 0.567442706 0.705894157 1.185718468 1 11.42659257 -6.256005765 24.71922867 0.757350616 1.079212156 0.33291013 0.192115373 412.6250987 1877160.051 0.057910684 0.072573492 5.55E-07 6.256005765 0.32186154 T(ph)NTPVKEDWNVR ddPTM_A459_MK2206_30min_R2 1 TNTPVKEDWNVR 12 1 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347;A0A494C0Q7 A0A494C1K3 GTF2I General transcription factor II-I 1 T(0.986)NT(0.014)PVKEDWNVR 153 0.0049816 35125000 46261 35853 29210 30168 32279 20428 37453 31285 23424 36378 TRUE FALSE 49802.77773 34072.59216 30183.84682 27703.1779 31011.56427 21205.40185 32535.37611 35374.05692 25461.37718 35190.98884 1.415213933 0.968219231 0.857715222 0.787223628 0.881235944 0.602580449 0.924537138 1.005202129 0.723519799 1 15.10291843 -4.70478046 2.215842402 0.840783773 1.64428807 0.681526145 0.116134275 0.475166433 2.274068743 0.030356938 0.817304084 1.97E-05 4.70478046 0.803504296 T(ph)PAAPASPAAVPSEGSGGSTTGWR ddPTM_A459_MK2206_30min_R1 1 TPAAPASPAAVPSEGSGGSTTGWR 24 0 P07199 P07199 CENPB Major centromere autoantigen B 1 T(0.846)PAAPAS(0.154)PAAVPSEGSGGSTTGWR 209.25 2.13E-31 116050000 3865 4178.6 3897.1 3282.5 3857.3 3463 4059.6 3993.1 3650.6 3132.2 TRUE FALSE 3536.261454 3906.572381 3632.57571 3535.318719 3703.655573 3659.072067 3788.791491 3958.188748 4030.092934 3520.240583 1.004551073 1.109745851 1.031911207 1.004283269 1.05210297 1.039438067 1.076287658 1.124408589 1.144834519 1 11.78145831 -7.443287097 3.696087935 1.101122317 1.042162346 0.189388531 0.045127504 0.330687141 8.559145181 0.020228684 0.012632202 3.60E-08 7.443287097 -0.058959971 T(ph)PAQSGAWDPNNPNTPSR ddPTM_A459_MK2206_30min_R2 2 TPAQSGAWDPNNPNTPSR 18 0 O00267-2;O00267 O00267-2 SUPT5H Transcription elongation factor SPT5 1 T(0.999)PAQS(0.001)GAWDPNNPNTPSR;T(0.998)PAQS(0.002)GAWDPNNPNTPSR 158.5 4.22E-05 7457800 16077.3 13699.7 11955.7 19058.9 14243.6 13158.3 15906.9 12393.7 7957 15470.4 TRUE FALSE 17308.19045 13019.39282 12354.29707 17501.7269 13684.3247 13659.04833 13818.30492 14013.59914 8649.085477 14965.60211 1.156531512 0.869954494 0.825512864 1.169463599 0.914385174 0.91269621 0.923337719 0.936387259 0.577931005 1 13.8693627 -8.03372544 24.7270679 0.778363275 0.959549389 0.193723383 0.142723933 840.2086604 616025.1242 0.091014251 0.034449778 9.25E-09 8.03372544 0.181186115 T(ph)PASINATPANINLADLTR ddPTM_A459_MK2206_30min_R2 1 TPASINATPANINLADLTR 19 0 Q7KZ85;Q7KZ85-2 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 T(0.999)PAS(0.001)INATPANINLADLTR 102.89 0.002453 4622500 5698.9 6612.7 5481.5 5828.9 7120.3 8677.9 6500.1 5530.8 6351 6883.8 TRUE FALSE 6135.212166 6284.322934 5664.250474 5352.660224 6840.721245 9008.143565 5646.629062 6253.69455 6903.3985 6659.18217 0.921316163 0.943707917 0.85059251 0.803801441 1.027261467 1.352740222 0.847946327 0.939108496 1.036673622 1 12.70112929 -6.327862601 8.88568717 1.037863015 0.882444721 0.263586892 0.126078324 0.615978622 78.44439756 0.041379701 0.046950332 4.70E-07 6.327862601 -0.155418294 T(ph)PASTPVSGTPQAS(ph)PMIER ddPTM_A459_MK2206_30min_R1 1 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 2 T(0.997)PAS(0.001)T(0.001)PVS(0.001)GT(0.001)PQAS(0.999)PMIER 144.5 0.010305 16318000 955.14 1206.7 1094.8 660.47 1081.9 1051.4 915.59 1010.6 898.78 877.17 TRUE FALSE 873.9003274 1128.143611 1020.488026 711.3395138 1038.805632 1110.929359 854.5126617 1001.764431 992.2113973 985.8404419 0.886452097 1.144347059 1.035145225 0.721556434 1.053725926 1.126885561 0.866785968 1.016152704 1.006462461 1 9.945210355 -5.605098977 24.4202702 0.969038259 1.034339477 0.034956516 0.119307983 72.62066416 21560.17603 0.032609644 0.05648156 2.48E-06 5.605098977 0.065301218 T(ph)PASTPVSGTPQAS(ph)PMIER ddPTM_A459_MK2206_30min_R2 2 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 2 T(0.564)PAS(0.054)T(0.381)PVS(0.001)GT(0.001)PQAS(0.998)PMIER;T(0.673)PAS(0.035)T(0.274)PVS(0.001)GT(0.018)PQAS(1)PMIER 171.13 5.34E-07 28519000 56463 75519 60991 82544 62929 70366 70555 52215 58549 67916 TRUE FALSE 60785.85069 71768.83627 63024.4095 75799.89115 60458.09127 73043.82744 61291.04375 59039.67978 63641.48619 65699.90648 0.925204524 1.092373492 0.959277005 1.153729057 0.920215789 1.111779778 0.932893927 0.898626542 0.968669357 1 16.0036037 -7.308022736 24.97309252 0.94159962 1.027878881 0.188882185 0.07742262 608.4006662 326158.36 0.029781377 0.020078661 4.92E-08 7.308022736 0.086279261 T(ph)PATTPEAR ddPTM_A459_MK2206_30min_R2 1 TPATTPEAR 9 0 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 T(0.682)PAT(0.159)T(0.159)PEAR 97.965 0.047055 3079000 22650 24430 20480 31209 27618 35769 36921 29179 37079 30243 TRUE FALSE 24384.10141 23216.84172 21162.79298 28659.12487 26533.57855 37130.21436 32073.22835 32992.79549 40304.0644 29256.17339 0.833468584 0.793570691 0.72336162 0.979592392 0.906939476 1.269141178 1.096289249 1.127720808 1.377625975 1 14.83645346 -6.40602735 1.451277565 1.179466071 0.793161524 0.664163253 0.115236479 0.230841749 0.984181389 0.04372457 0.053459354 3.93E-07 6.40602735 -0.386304547 T(ph)PCEEILVK ddPTM_A459_MK2206_30min_R2 3 TPCEEILVK 9 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 T(1)PCEEILVK;T(1)PCEEILVK;T(1)PCEEILVK 126.39 0.011263 14501400 59249 61809 64799 67667 53513 53218 65076 46616.3 46455.9 60773 TRUE FALSE 63785.14899 58739.65494 66959.36632 62138.38964 51411.81074 55243.24828 56531.44303 52709.21047 50496.55021 58789.98199 1.084966296 0.999143952 1.138958783 1.056955412 0.874499515 0.939671121 0.961582928 0.896567896 0.858931207 1 15.84328272 -6.207971747 7.284486678 0.919664445 1.070621038 0.677995784 0.05001208 0.157832292 18.77531691 0.014606164 0.018833719 6.19E-07 6.207971747 0.150956592 T(ph)PDIAQR ddPTM_A459_MK2206_30min_R2 2 TPDIAQR 7 0 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 T(1)PDIAQR;T(1)PDIAQR 111.46 0.035038 23787000 41575 53530 48451 56590 54230 58528 58607 36595 45211 47889 TRUE FALSE 44758.01397 50871.77804 50066.33216 51966.41598 52100.65772 60755.32405 50911.8305 41378.09215 49143.37106 46326.38585 0.966145171 1.098116702 1.080730371 1.121745524 1.124643262 1.311462635 1.098981273 0.893186278 1.06080736 1 15.49954651 -7.612956186 8.221685463 0.983736165 1.1225414 0.315814785 0.087707733 0.306709952 24.69226131 0.043074583 0.024762403 2.44E-08 7.612956186 0.138805235 T(ph)PDSPPTPAPLLLDLGIPVGQR ddPTM_A459_MK2206_30min_R2 1 TPDSPPTPAPLLLDLGIPVGQR 22 0 Q16584;Q16584-2;E9PID4 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 T(0.565)PDS(0.434)PPT(0.002)PAPLLLDLGIPVGQR 87.323 0.0012708 2961200 5261.8 6957.8 8370.4 7370.7 6556.7 6746.7 8087 7210.6 8274.3 8311.2 TRUE FALSE 5664.647454 6612.28577 8649.464958 6768.490232 6299.251013 7003.450396 7025.167186 8153.050178 8993.983657 8040.006225 0.704557596 0.822422966 1.075803266 0.841851367 0.783488325 0.871075246 0.873776337 1.014060182 1.118653818 1 12.9729809 -7.810264111 3.310459813 1.061990305 0.85643782 0.477497893 0.09237286 0.226395031 4.99792881 0.058816126 0.026581685 1.55E-08 7.810264111 -0.205552486 T(ph)PDTIRR ddPTM_A459_MK2206_30min_R2 1 TPDTIRR 7 1 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 1 T(1)PDTIRR 97.635 0.027924 10164000 9966.4 29644 18219 23611 19695 26758 18076 14799 24989 18541 TRUE FALSE 10729.43525 28171.92207 18826.41237 21681.90577 18921.67534 27776.29444 15702.59949 16733.28011 27162.49805 17936.00869 0.598206403 1.570690701 1.049643357 1.208847863 1.054954626 1.548632972 0.87547903 0.932943355 1.514411513 1 14.13057126 -4.733723176 24.61160048 1.185540946 0.598202581 0.340733754 0.248750007 2960.705128 2628894.538 0.059167329 5.49124986 1.85E-05 4.733723176 -0.587338365 T(ph)PDTSTYCYETAEK ddPTM_A459_MK2206_30min_R1 6 TPDTSTYCYETAEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(1)PDTSTYCYETAEK;T(1)PDTSTYCYETAEK;T(0.999)PDT(0.001)STYCYETAEK;T(1)PDTSTYCYETAEK;T(0.992)PDT(0.004)S(0.004)TYCYETAEK;T(1)PDTSTYCYETAEK 245.4 5.41E-20 508836800 16904.82 16719.2 15215.23 12947.14 13938.4 12651.74 17315.1 14260.54 16073.2 17450.61 TRUE FALSE 15466.97629 15630.77704 14182.46258 13944.33097 13383.20401 13368.07059 16160.04127 14135.8616 17744.06666 19612.52331 0.788627554 0.796979399 0.723132988 0.710991174 0.682380528 0.681608907 0.823965433 0.720756905 0.90473145 1 14.25948754 -8.432299709 2.819529339 0.999629396 0.739362728 0.777405297 0.046433253 0.116585637 1.871385455 0.047421933 0.012811917 3.70E-09 8.432299709 -0.260266668 T(ph)PDTSTYCYETAEK ddPTM_A459_MK2206_30min_R2 4 TPDTSTYCYETAEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(1)PDTSTYCYETAEK;T(1)PDTSTYCYETAEK;T(0.994)PDT(0.004)S(0.001)T(0.001)YCYETAEK;T(1)PDTSTYCYETAEK 203.11 9.16E-05 456120400 165566 135779 141881 149586 154363 117386 160782 127716 109909 144384 TRUE FALSE 178241.8603 129036.4123 146611.2417 137364.3453 148301.933 121853.2065 139671.1303 144408.9197 119468.6862 139672.7619 1.276139011 0.923848076 1.049676685 0.983472679 1.061781345 0.872419252 0.999988318 1.033908958 0.855347059 1 17.09169118 -4.754849164 24.99911722 0.979455444 1.276139511 0.640831017 0.067442879 138.7453048 526263.9503 0.015949694 0.149499857 1.76E-05 4.754849164 0.296684067 T(ph)PEDGDYSYEIIEK ddPTM_A459_MK2206_30min_R1 1 TPEDGDYSYEIIEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(1)PEDGDYSYEIIEK 241.76 2.72E-19 10713000 2960.1 3054.1 2556.8 2005.1 2404.6 2046.2 2858.6 2416.9 3009.3 4266.4 TRUE FALSE 2708.327951 2855.277535 2383.25154 2159.533149 2308.81969 2162.054076 2667.90801 2395.769298 3322.127504 4794.953842 0.564828785 0.5954755 0.49703326 0.450376212 0.481510306 0.450901958 0.556399102 0.499643871 0.692838266 1 12.22730121 -8.624029342 2.094538285 0.999816009 0.509178344 0.913182805 0.046275289 0.1277017 1.217789339 0.048677053 0.01345438 2.38E-09 8.624029342 -0.490637665 T(ph)PEDGDYSYEIIEK ddPTM_A459_MK2206_30min_R2 2 TPEDGDYSYEIIEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(1)PEDGDYSYEIIEK;T(0.999)PEDGDYS(0.001)YEIIEK 198.85 0.00020759 6441200 22999 16508.5 15232.5 19770.4 20333.4 16231 21462.1 14636.4 14923.2 19454.7 TRUE FALSE 24759.82112 15688.7119 15740.34395 18155.09508 19535.00855 16848.68208 18644.10049 16549.42773 16221.19296 18819.89473 1.315619533 0.833623786 0.836367268 0.964675697 1.037997759 0.895259103 0.990659127 0.879358146 0.861917306 1 14.19997094 -4.753503533 24.99922623 0.921996612 1.315620248 0.746265296 0.068819681 152.3156111 479781.1835 0.017851928 0.19103426 1.76E-05 4.753503533 0.393623636 T(ph)PEEGGYSYDISEK ddPTM_A459_MK2206_30min_R1 5 TPEEGGYSYDISEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK 198.16 0.00022613 540396400 14834.4 15405.7 14064 10179.6 11762.5 11147.4 16300.1 12202.9 15998.3 19649.1 TRUE FALSE 13572.65638 14402.78613 13109.37486 10963.63456 11293.97472 11778.55615 15212.75007 12096.21133 17661.38054 22083.37885 0.614609588 0.652200292 0.593630846 0.496465447 0.511424216 0.533367481 0.688877829 0.547751837 0.79975898 1 14.43067331 -8.502136287 2.591393993 0.999716211 0.578722894 0.840135732 0.058942723 0.103505318 1.613635803 0.06092645 0.016509129 3.15E-09 8.502136287 -0.420993317 T(ph)PEEGGYSYDISEK ddPTM_A459_MK2206_30min_R2 7 TPEEGGYSYDISEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK 222.75 1.06E-08 533880000 838513.4 610613 630599.6 699080.5 609544.3 534309.8 790927.5 615879.4 517195.1 803225.2 TRUE FALSE 902710.6306 580290.8463 651623.4759 641963.3869 585610.5281 554643.3338 687077.7692 696376.9522 562179.7949 777016.0275 1.161765779 0.746819661 0.838622954 0.826190663 0.753665957 0.71381196 0.884251733 0.896219547 0.723511195 1 19.56758483 -4.754587195 24.99781647 0.814438865 1.161766373 0.587711779 0.08566048 160.0954682 584000.7634 0.020387714 0.196486359 1.76E-05 4.754587195 0.347327509 T(ph)PEGISEEQR ddPTM_A459_MK2206_30min_R1 2 TPEGISEEQR 10 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 T(1)PEGISEEQR;T(1)PEGISEEQR 129.74 0.0067747 17248200 2167.46 1734.63 2378.1 1852.15 2060.89 1680.32 2313.94 1742.7 1671.3 2431.42 TRUE FALSE 1983.106145 1621.705272 2216.681198 1994.802914 1978.800387 1775.458266 2159.581285 1727.463758 1845.037616 2732.642666 0.725710013 0.593456763 0.811185899 0.7299904 0.724134338 0.649722076 0.790290407 0.632158672 0.67518437 1 11.4160811 -11.38402633 2.67476421 1.125944123 0.703718746 0.65511404 0.064531275 57380738.23 33982187.58 45886066.35 0.015463342 4.13E-12 11.38402633 -0.422225378 T(ph)PEGISEEQR ddPTM_A459_MK2206_30min_R2 1 TPEGISEEQR 10 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 T(1)PEGISEEQR 130.44 0.0065 26309000 14427 9893 6344.5 17566 13752 13190 17153 5000.4 10587 20175 TRUE FALSE 15531.54221 9401.728006 6556.022463 16130.80161 13212.02738 13691.95469 14900.7905 5653.969449 11507.83812 19516.6914 0.795808157 0.481727554 0.335918744 0.826513125 0.676960408 0.701551017 0.763489579 0.289699178 0.58964083 1 14.25242088 -5.770886536 24.99980645 0.665635903 0.532209063 0.099928596 0.20157898 526.9024968 1394332.404 0.057653957 0.086796403 1.69E-06 5.770886536 -0.13342684 T(ph)PELPEPSVK ddPTM_A459_MK2206_30min_R2 2 TPELPEPSVK 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(1)PELPEPSVK;T(1)PELPEPSVK 124.42 0.0089947 47148000 232659 294650 242210 271150 244870 236960 288790 225010 215560 293410 TRUE FALSE 250471.5519 280018.1095 250285.1605 248996.1776 235255.1734 245977.6788 250871.5261 254419.5796 234309.0192 283836.0557 0.882451496 0.986548762 0.881794809 0.877253515 0.828841751 0.866618859 0.883860669 0.896361031 0.825508298 1 18.11469834 -5.132370794 0.002236886 1.770716529 5.67E-08 0.03256032 0.054005264 1147039.962 450.492801 175740.286 180892.0502 7.37E-06 5.132370794 -1.770716472 T(ph)PENLITEIR ddPTM_A459_MK2206_30min_R1 4 TPENLITEIR 10 0 Q7Z4H7;Q5VY60;Q7Z4H7-3;Q5SYF9 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 T(1)PENLITEIR;T(1)PENLITEIR;T(1)PENLITEIR;T(1)PENLITEIR 148.89 0.0017989 27469300 1965.33 1831.99 1834.39 1414.49 1991.89 1675.82 2030.27 1736.04 1562.29 1678.11 TRUE FALSE 1798.168363 1712.727118 1709.876718 1523.434265 1912.548803 1770.70348 1894.834393 1720.861985 1724.695636 1886.006936 0.953426167 0.908123446 0.906612105 0.807756449 1.014073049 0.938863716 1.004680501 0.912436722 0.914469403 1 10.88111927 -6.282175456 24.99994273 0.96047755 0.895892127 0.340946185 0.047563458 1047.459356 1262840.171 0.014919619 0.01693406 5.22E-07 6.282175456 -0.064585423 T(ph)PENLITEIR ddPTM_A459_MK2206_30min_R2 3 TPENLITEIR 10 0 Q7Z4H7;Q5VY60;Q7Z4H7-3;Q5SYF9 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 T(1)PENLITEIR;T(1)PENLITEIR;T(1)PENLITEIR 136.7 0.004273 21600400 5624.49 6275.8 5121.5 4116.2 4044.01 3981.54 5203.76 3418.6 2786.84 4833.68 TRUE FALSE 6055.105279 5964.152898 5292.248254 3779.893293 3885.221848 4133.060295 4520.500061 3865.422758 3029.234306 4675.957417 1.294944487 1.275493416 1.131799925 0.808367775 0.830893334 0.883896051 0.966753898 0.826659102 0.647831885 1 12.19104608 -5.599004166 3.194609001 0.849640107 1.27734661 0.792970371 0.091355464 0.105640898 2.156131919 0.02631571 0.051428457 2.52E-06 5.599004166 0.427706504 T(ph)PESFLGPNAALVDLDSLVSRPGPTPPGAK ddPTM_A459_MK2206_30min_R1 2 TPESFLGPNAALVDLDSLVSRPGPTPPGAK 30 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 T(0.993)PES(0.007)FLGPNAALVDLDSLVSRPGPTPPGAK;T(0.988)PES(0.012)FLGPNAALVDLDSLVSRPGPTPPGAK 109.77 6.88E-11 32016000 3271.36 2700.56 2609.48 1969.67 2652.76 2471.11 2906.63 3030.01 3182.2 2736.91 TRUE FALSE 2993.113653 2524.753053 2432.355768 2121.374325 2547.094952 2611.022113 2712.734016 3003.518942 3513.001078 3075.979073 0.973060473 0.820796564 0.79075823 0.689658243 0.828059909 0.848842613 0.881909126 0.97644323 1.14207574 1 11.58682997 -7.779793385 1.912797621 1.071253514 0.81768253 0.639968008 0.073516902 0.220164045 1.55938002 0.056024135 0.022411489 1.66E-08 7.779793385 -0.253570984 T(ph)PESFLGPNAALVDLDSLVSRPGPTPPGAK ddPTM_A459_MK2206_30min_R2 1 TPESFLGPNAALVDLDSLVSRPGPTPPGAK 30 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 T(0.953)PES(0.047)FLGPNAALVDLDSLVSRPGPTPPGAK 95.519 1.35E-07 5710700 4536.3 5279.7 4104.2 5693.9 4435.6 5875.6 5618 4699.1 5632.4 6957.1 TRUE FALSE 4883.602616 5017.517775 4241.03198 5228.690156 4261.436057 6099.200075 4880.349852 5313.288504 6122.295971 6730.090397 0.725637002 0.745534975 0.630159735 0.776912322 0.633191503 0.906258269 0.725153685 0.789482487 0.909690006 1 12.71641017 -8.375434704 0.514902624 1.009970424 0.705233119 0.610068995 0.071808318 0.620292902 0.413832293 0.076994225 0.038971485 4.21E-09 8.375434704 -0.304737305 T(ph)PETLLPFAEAEAFLKK ddPTM_A459_MK2206_30min_R1 1 TPETLLPFAEAEAFLKK 17 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 T(0.99)PET(0.01)LLPFAEAEAFLKK 113.05 0.0023187 4860700 689.19 732.28 606.24 593.25 729.98 629.3 533.23 447.3 678.12 570.06 TRUE FALSE 630.5707714 684.6084389 565.0901179 638.9422178 700.9033508 664.9304222 497.6591996 443.3893033 748.6130007 640.6833365 0.98421597 1.06855977 0.882011574 0.997282404 1.093993414 1.037845663 0.776763139 0.692056868 1.168460233 1 9.323467658 -7.23534686 24.54175624 0.883658105 1.010616989 0.113884287 0.130862463 1055.574284 992839.2388 0.049595481 0.038402872 5.82E-08 7.23534686 0.126958884 T(ph)PETLLPFAEAEAFLKK ddPTM_A459_MK2206_30min_R2 1 TPETLLPFAEAEAFLKK 17 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 T(0.866)PET(0.134)LLPFAEAEAFLKK 105.17 0.0033481 960440 4881.9 7002.4 4444.8 7109 6586.4 3981.6 6064.5 5304.8 5889.5 5811.2 TRUE FALSE 5255.662018 6654.670998 4592.987414 6528.171959 6327.784842 4133.122578 5268.223865 5998.155574 6401.758064 5621.58102 0.934908169 1.183772141 0.8170277 1.161269745 1.125623703 0.73522423 0.937142744 1.066987304 1.138782496 1 12.45676022 -7.883678737 7.358558477 1.080090646 0.988940161 0.068148993 0.139911281 0.653665213 39.03078595 0.078211024 0.037326453 1.31E-08 7.883678737 -0.091150484 T(ph)PGPPGLTTTPAPPDK ddPTM_A459_MK2206_30min_R2 2 TPGPPGLTTTPAPPDK 16 0 Q7Z5J4-3;Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 T(1)PGPPGLTTTPAPPDK;T(0.999)PGPPGLT(0.001)TTPAPPDK 154.81 0.00024076 16471600 91224 96436 86731 82406 64893 54122 58374 53646 41574 59026 TRUE FALSE 98208.17958 91647.12847 89622.56825 75673.1662 62344.97476 56181.65064 50709.42368 60657.71639 45190.03137 57099.98645 1.7199335 1.6050289 1.569572496 1.325274679 1.091856209 0.983917057 0.888081186 1.062307019 0.791419301 1 15.80120278 -6.038939521 1.16549388 0.933047307 1.691288632 0.949937589 0.069616924 0.091704195 0.254080651 0.025496412 0.047933075 9.14E-07 6.038939521 0.758241325 T(ph)PIQAGGYGEFAAFK ddPTM_A459_MK2206_30min_R1 1 TPIQAGGYGEFAAFK 15 0 H7C560;A0A2R8Y8E0 H7C560 BRAF 1 T(1)PIQAGGYGEFAAFK 98.105 0.027481 0 751.78 780.78 690.65 549.9 925.82 755.16 785.49 594.54 569.46 655.72 TRUE FALSE 687.8371632 729.9510801 643.7706023 592.2533933 888.9426289 797.9165066 733.0913953 589.3419995 628.6574048 736.955544 0.933349601 0.990495405 0.873554189 0.803648738 1.206236436 1.08272 0.994756605 0.799698169 0.853046578 1 9.525433783 -7.74113312 24.86906462 0.869779274 0.985036092 0.1347987 0.113466253 410.6617902 502938.3642 0.05741206 0.033095502 1.81E-08 7.74113312 0.115256817 T(ph)PIQAGGYGEFAAFK ddPTM_A459_MK2206_30min_R2 1 TPIQAGGYGEFAAFK 15 0 H7C560;A0A2R8Y8E0 H7C560 BRAF 1 T(1)PIQAGGYGEFAAFK 130.64 0.001823 1818700 6923.4 7263 7695.8 6661.8 8375.2 5331.2 7387 6118.7 5440.6 5808.2 TRUE FALSE 7453.460827 6902.329981 7952.374131 6117.50963 8046.347566 5534.082552 6417.078027 6918.435099 5913.813554 5618.67891 1.326550413 1.228461368 1.415345895 1.088780784 1.432071079 0.984943728 1.142097303 1.231327721 1.052527409 1 12.45601524 -6.766515664 24.99999965 1.100382107 1.289234258 0.47610363 0.112318126 125.405431 617599.921 0.037241249 0.033841188 1.71E-07 6.766515664 0.188852151 T(ph)PKDSPGIPPSANAHQLFR ddPTM_A459_MK2206_30min_R1 1 TPKDSPGIPPSANAHQLFR 19 1 B4DG22;B1AXG1;B7ZB17;P51812 B4DG22 RPS6KA3 Ribosomal protein S6 kinase alpha-3 1 T(0.994)PKDS(0.006)PGIPPSANAHQLFR 111.58 0.00084188 25223000 1886.9 1438.6 2090.1 1535 2069.9 1866.2 2356.5 2474.2 1763.6 1687.2 TRUE FALSE 1726.409246 1344.946879 1948.229835 1653.225966 1987.4515 1971.862631 2199.302185 2452.56833 1946.932531 1896.223074 0.910446282 0.709276718 1.0274265 0.871852046 1.048110598 1.039889588 1.159833047 1.293396523 1.026742348 1 10.88891298 -6.292844841 0.988742112 1.139527198 0.83766078 0.500395017 0.106072788 0.409603417 0.849100937 0.048540982 0.073308538 5.10E-07 6.292844841 -0.301866418 T(ph)PKDSPGIPPSANAHQLFR ddPTM_A459_MK2206_30min_R2 2 TPKDSPGIPPSANAHQLFR 19 1 B4DG22;B1AXG1;B7ZB17;P51812 B4DG22 RPS6KA3 Ribosomal protein S6 kinase alpha-3 1 T(0.5)PKDS(0.5)PGIPPSANAHQLFR;T(0.893)PKDS(0.107)PGIPPSANAHQLFR 81.713 0.003159 70314000 331410 545630 463260 645320 794740 664880 844020 663010 800650 654310 TRUE FALSE 356783.0044 518534.8076 478704.8572 592595.2917 763534.5144 690182.4743 733199.1602 749667.6835 870289.0898 632959.9183 0.56367393 0.819222186 0.756295688 0.936228779 1.206292045 1.090404707 1.15836586 1.184384132 1.374951343 1 19.27175462 -5.849716722 1.070636428 1.191511223 0.642340569 0.787069165 0.106842846 0.247489352 0.559102464 0.040330607 0.101815509 1.41E-06 5.849716722 -0.549170654 T(ph)PLCNLLVK ddPTM_A459_MK2206_30min_R1 1 TPLCNLLVK 9 0 Q2PZI1;H7C3M5;A0A1B0GW05;Q2PZI1-2 Q2PZI1 DPY19L1 Probable C-mannosyltransferase DPY19L1 1 T(1)PLCNLLVK 114.51 0.01986 95229000 3277.6 3029.1 3657.9 2864.4 3651.6 3058.9 3230.7 3132.2 2585.3 2368 TRUE FALSE 2998.822909 2831.905039 3409.611939 3085.016584 3506.14904 3232.092275 3015.185898 3104.815506 2854.051187 2661.365717 1.126798504 1.064079627 1.281151221 1.159185513 1.31742474 1.214448752 1.132946847 1.166624897 1.072400974 1 11.37795106 -8.392334044 1.309039978 0.999768858 1.191593768 0.436105318 0.069782377 0.423554922 1.537200105 0.069288668 0.021455284 4.05E-09 8.392334044 0.19182491 T(ph)PLGASLDEQSSSTLK ddPTM_A459_MK2206_30min_R1 1 TPLGASLDEQSSSTLK 16 0 E9PHV5;P28290-3;P28290 E9PHV5 SSFA2 Sperm-specific antigen 2 1 T(0.999)PLGAS(0.001)LDEQSSSTLK 164.81 5.10E-05 10063000 3118.9 1871.2 1658.5 2099.7 1773.1 2582.9 1638.8 1485 1621.5 1114.8 TRUE FALSE 2853.621177 1749.38454 1545.925641 2261.419258 1702.473672 2729.141566 1529.478642 1472.016802 1790.060728 1252.90984 2.277594991 1.396257323 1.233868225 1.804933751 1.358815788 2.178242582 1.220741184 1.174878474 1.428722698 1 10.29106689 -5.751589296 0.059482962 2.86E-12 3.260068858 0.301262483 0.344388355 169.0490727 2.284795304 45.28444775 81.89199613 1.77E-06 5.751589296 3.260068858 T(ph)PMYGSQTPLQDGSR ddPTM_A459_MK2206_30min_R2 1 TPMYGSQTPLQDGSR 15 0 O00267-2;O00267 O00267-2 SUPT5H Transcription elongation factor SPT5 1 T(0.609)PMY(0.026)GS(0.085)QT(0.281)PLQDGS(0.001)R 89.9 0.037697 9094100 13501 16058 15944 15954 14867 19747 15270 12324 12474 16847 TRUE FALSE 14534.64694 15260.58307 16475.565 14650.50717 14283.24688 20498.48592 13265.03066 13934.78911 13558.96597 16297.28377 0.891844748 0.93638813 1.010939322 0.898953922 0.876418861 1.257785421 0.813941197 0.855037521 0.831977044 1 13.99234391 T(ph)PPAPSPFDLPELK ddPTM_A459_MK2206_30min_R2 2 TPPAPSPFDLPELK 14 0 O95239 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 T(1)PPAPSPFDLPELK;T(1)PPAPSPFDLPELK 103.83 0.015456 5488700 23226.8 23840.2 22447.6 24928.7 24012.1 18401.4 25339.6 20364.7 19756.8 24318.5 TRUE FALSE 25005.06167 22656.33033 23195.99178 22891.94547 23069.2643 19101.67817 22012.48008 23026.43621 21475.21075 23524.98934 1.062914899 0.963075052 0.986014975 0.973090578 0.980628045 0.811973935 0.935706272 0.978807509 0.912868033 1 14.52190645 -1.522878745 0.615745343 0.934357769 9.393197417 0.317698993 0.051285534 228.0039599 1.670413307 0.023268328 2606.536177 0.03 1.522878745 8.458839648 T(ph)PPASLYHGYLPENGVLRPEPTK ddPTM_A459_MK2206_30min_R2 1 TPPASLYHGYLPENGVLRPEPTK 23 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 T(0.872)PPAS(0.107)LY(0.021)HGYLPENGVLRPEPTK 57.432 0.0090499 6758400 22630 27738 23091 41905 36418 36562 41073 29047 29274 33952 TRUE FALSE 24362.5702 26360.57125 23860.84242 38481.22745 34988.04633 37953.39253 35680.06576 32843.54263 31820.1996 32844.14902 0.741762869 0.802595654 0.726486852 1.171631131 1.065274863 1.155560234 1.086344656 0.999981537 0.968823993 1 15.00334877 -5.753636813 24.99753051 1.068750443 0.761513095 0.827580978 0.064177768 70.31251785 225261.7538 0.018391325 0.031117095 1.76E-06 5.753636813 -0.307237348 T(ph)PPGEVVWVER ddPTM_A459_MK2206_30min_R1 1 TPPGEVVWVER 11 0 A0A494C030 A0A494C030 1 T(1)PPGEVVWVER 125.36 0.0078693 4880200 214.35 173.4 258.41 130.03 278.12 237.76 244.07 143.08 239.72 0 TRUE FALSE 196.1184069 162.1116285 240.8698492 140.0449331 267.0418915 251.2217657 227.7885356 141.8290666 264.6397518 0 0 T(ph)PPGPCCSPGVGWAQR ddPTM_A459_MK2206_30min_R1 2 TPPGPCCSPGVGWAQR 16 0 H3BSW6;Q2VPK5-3;Q2VPK5;Q2VPK5-5 H3BSW6 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 1 T(0.963)PPGPCCS(0.037)PGVGWAQR;T(0.966)PPGPCCS(0.034)PGVGWAQR 138.25 0.00094755 9350800 565.97 454.07 521.92 485.84 527.05 501.69 529.48 579.01 504.13 359.36 TRUE FALSE 517.8312795 424.5099605 486.4935246 523.259481 506.0564825 530.0952542 494.1593553 573.9477766 556.5361175 403.8802298 1.282140697 1.051078833 1.204548994 1.295580824 1.252986517 1.312506073 1.22352945 1.421084109 1.377973162 1 8.657783717 -5.621758431 4.451966182 1.285550039 1.158147676 0.099496251 0.118862125 0.35599252 12.36037371 0.031197266 0.056137118 2.39E-06 5.621758431 -0.127402363 T(ph)PPGPCCSPGVGWAQR ddPTM_A459_MK2206_30min_R2 2 TPPGPCCSPGVGWAQR 16 0 H3BSW6;Q2VPK5-3;Q2VPK5;Q2VPK5-5 H3BSW6 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 1 T(0.972)PPGPCCS(0.028)PGVGWAQR;T(0.791)PPGPCCS(0.209)PGVGWAQR 149.33 0.00061341 19126200 15235.3 18523.8 13665.2 24420.3 25534 17320.5 22437.3 11390.1 14791.6 22749.1 TRUE FALSE 16401.72628 17603.93503 14120.79095 22425.08337 24531.40686 17979.64376 19491.25556 12878.82518 16078.14663 22006.79873 0.74530269 0.799931659 0.641655841 1.019007065 1.114719463 0.817004053 0.885692453 0.585220292 0.730599068 1 14.42566168 -12.43171704 11.95279103 0.997587944 0.830017462 0 0.161958926 0 0 0 0.039395187 3.70E-13 12.43171704 -0.167570482 T(ph)PPPPSSTFPK ddPTM_A459_MK2206_30min_R1 1 TPPPPSSTFPK 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 T(1)PPPPSSTFPK 111.63 0.019028 16792000 2635 2708.2 2729.7 2370.4 2813.4 2374.7 3221.5 2130.8 2782.8 2810 TRUE FALSE 2410.879413 2531.895688 2544.415569 2552.968619 2701.336321 2509.153462 3006.599613 2112.17064 3072.082018 3158.124014 0.763389722 0.80170876 0.805673101 0.80838137 0.855361065 0.794507578 0.952020756 0.668805478 0.972755346 1 11.62485211 -14.52287873 0.140230661 1.635572126 0.756884992 0.374942034 0.077804659 147.4128515 1.261065743 25.9573392 0.442973912 3.00E-15 14.52287873 -0.878687134 T(ph)PPPPTLSPAAITVGR ddPTM_A459_MK2206_30min_R2 1 TPPPPTLSPAAITVGR 16 0 Q8NDX5-2;Q8NDX5;Q8NDX5-7;E7EX82;H7C4H9 Q8NDX5-2 PHC3 Polyhomeotic-like protein 3 1 T(0.414)PPPPT(0.262)LS(0.323)PAAIT(0.001)VGR 152 0.00043181 7598600 2897.8 1382.9 1842.7 1326.3 1986.2 1473.4 1927.2 1271 1240.7 1062 TRUE FALSE 3119.657796 1314.227197 1904.134698 1217.937047 1908.211808 1529.471269 1674.156325 1437.124064 1348.613843 1027.347027 3.036615393 1.279243685 1.853448395 1.18551669 1.857416976 1.48875816 1.629591833 1.398869152 1.312714991 1 10.00470788 -4.756876957 24.99996615 1.482196231 3.036617719 0.764670316 0.264154654 61.84266068 338827.5506 0.06044123 0.470819187 1.75E-05 4.756876957 1.554421488 T(ph)PPRDLPTIPGVTSPSSDEPPMEASQSHLR ddPTM_A459_MK2206_30min_R1 8 TPPRDLPTIPGVTSPSSDEPPMEASQSHLR 30 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 T(0.612)PPRDLPT(0.386)IPGVT(0.001)S(0.001)PSSDEPPMEASQSHLR;T(0.482)PPRDLPT(0.477)IPGVT(0.011)S(0.011)PS(0.009)S(0.01)DEPPMEASQSHLR;T(0.665)PPRDLPT(0.332)IPGVT(0.001)S(0.001)PSSDEPPMEASQSHLR;T(0.84)PPRDLPT(0.154)IPGVT(0.003)S(0.002)PSSDEPPMEASQSHLR;T(0.845)PPRDLPT(0.118)IPGVT(0.023)S(0.011)PS(0.002)S(0.001)DEPPMEASQSHLR;T(0.949)PPRDLPT(0.051)IPGVTSPSSDEPPMEASQSHLR;T(0.819)PPRDLPT(0.133)IPGVT(0.005)S(0.005)PS(0.018)S(0.018)DEPPMEASQSHLR;T(0.766)PPRDLPT(0.061)IPGVT(0.074)S(0.023)PS(0.058)S(0.018)DEPPMEASQSHLR 103.37 1.70E-08 251560800 13151.62 8359.97 10418.6 6546.36 13634.86 13542.91 15046.614 10818.18 9345.8 9972.73 TRUE FALSE 12033.00566 7815.734434 9711.41446 7050.561781 13091.75465 14309.69786 14042.88183 10723.59779 10317.32935 11208.22708 1.07358689 0.697321207 0.866454113 0.629052367 1.168048663 1.276713771 1.252908398 0.956761289 0.920513947 1 13.45227047 -6.276944288 24.97953639 1.110561095 0.811644212 0.435015232 0.155305506 751.6622194 1210979.743 0.050132657 0.057042684 5.29E-07 6.276944288 -0.298916883 T(ph)PPRDLPTIPGVTSPSSDEPPMEASQSHLR ddPTM_A459_MK2206_30min_R2 15 TPPRDLPTIPGVTSPSSDEPPMEASQSHLR 30 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 T(0.498)PPRDLPT(0.379)IPGVT(0.02)S(0.02)PS(0.041)S(0.041)DEPPMEASQSHLR;T(0.523)PPRDLPT(0.439)IPGVT(0.018)S(0.014)PS(0.004)S(0.002)DEPPMEASQSHLR;T(0.841)PPRDLPT(0.159)IPGVTSPSSDEPPMEASQSHLR;T(0.846)PPRDLPT(0.151)IPGVT(0.002)S(0.001)PSSDEPPMEASQSHLR;T(0.623)PPRDLPT(0.366)IPGVT(0.002)S(0.001)PS(0.003)S(0.004)DEPPMEASQSHLR;T(0.485)PPRDLPT(0.136)IPGVT(0.171)S(0.171)PS(0.019)S(0.019)DEPPMEASQSHLR;T(0.903)PPRDLPT(0.095)IPGVT(0.001)SPSSDEPPMEASQSHLR;T(0.722)PPRDLPT(0.272)IPGVT(0.005)S(0.001)PSSDEPPMEASQSHLR;T(0.393)PPRDLPT(0.393)IPGVT(0.122)S(0.04)PS(0.014)S(0.039)DEPPMEASQSHLR;T(0.786)PPRDLPT(0.2)IPGVT(0.007)S(0.007)PSSDEPPMEASQSHLR;T(0.527)PPRDLPT(0.436)IPGVT(0.025)S(0.008)PS(0.002)S(0.002)DEPPMEASQSHLR;T(0.917)PPRDLPT(0.083)IPGVTSPSSDEPPMEASQSHLR;T(0.702)PPRDLPT(0.267)IPGVT(0.015)S(0.015)PS(0.001)S(0.001)DEPPMEASQSHLR;T(0.954)PPRDLPT(0.046)IPGVTSPSSDEPPMEASQSHLR;T(0.537)PPRDLPT(0.153)IPGVT(0.199)S(0.066)PS(0.023)S(0.023)DEPPMEASQSHLR 96.957 1.14E-07 629777900 118214.7 198208.5 160392.9 213945.9 196958.3 246174.1 218584.2 182734.3 203040.2 195701.7 TRUE FALSE 127265.3083 188365.7541 165740.3192 196465.8356 189224.7275 255542.4279 189883.832 206618.3004 220700.2696 189315.9696 0.672237575 0.994980796 0.875469299 1.037766841 0.999518044 1.349819714 1.002999548 1.091393932 1.165777351 1 17.53043659 -4.067524808 0.597459015 1.114571935 6.83E-16 0.544953623 0.112675023 6.085181271 0.878392644 0.053224784 5.647876791 8.56E-05 4.067524808 -1.114571935 T(ph)PPVPDSGSANGSFFAPSR ddPTM_A459_MK2206_30min_R1 2 TPPVPDSGSANGSFFAPSR 19 0 Q9NPA3 Q9NPA3 MID1IP1 Mid1-interacting protein 1 1 T(1)PPVPDSGSANGSFFAPSR;T(1)PPVPDSGSANGSFFAPSR 137.69 0.00036811 11401700 454.64 545.22 569.59 280.47 469.12 588.77 375.89 485.25 481.03 192.84 TRUE FALSE 415.9704806 509.7260789 530.9278178 302.071848 450.433957 622.1056486 350.815064 481.0075104 531.0347899 216.7304751 1.919298523 2.35188927 2.44971464 1.393767295 2.078313891 2.870411503 1.61866975 2.219381055 2.450208212 1 7.759758219 -10.63843666 6.725076921 0.999998706 2.148150289 0.418087731 0.407077179 7.85E-06 1.03E-06 0.391448697 0.094940148 2.30E-11 10.63843666 1.148151583 T(ph)PPVPDSGSANGSFFAPSR ddPTM_A459_MK2206_30min_R2 1 TPPVPDSGSANGSFFAPSR 19 0 Q9NPA3 Q9NPA3 MID1IP1 Mid1-interacting protein 1 1 T(1)PPVPDSGSANGSFFAPSR 181.86 8.18E-13 9613100 1304.7 2451.9 2591.7 4775.8 6626.4 4905.8 5046.2 1398.7 4642.2 1843.8 TRUE FALSE 1404.588835 2330.142211 2678.105984 4385.601863 6366.214241 5092.493657 4383.627878 1581.514892 5045.970165 1783.636957 0.787485833 1.306399378 1.501486036 2.458797372 3.569232077 2.855117818 2.457690653 0.886679818 2.829034319 1 10.80060628 -5.589995741 3.067958457 2.371088054 1.082877438 0.297249987 0.783179636 0.315190887 5.966808664 0.22986738 0.458150537 2.57E-06 5.589995741 -1.288210616 T(ph)PQAPASANLVGPR ddPTM_A459_MK2206_30min_R2 1 TPQAPASANLVGPR 14 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(1)PQAPASANLVGPR 110.6 0.0098204 10327000 12928 14836 14367 8450.7 10021 9019.5 11928 13729 4696.7 11370 TRUE FALSE 13917.77762 14099.26581 14845.98861 7760.250778 9627.525189 9362.743393 10361.83927 15523.42744 5105.210476 10998.99783 1.265367794 1.281868224 1.3497583 0.705541623 0.875309309 0.851236043 0.942071217 1.411349259 0.46415233 1 13.42508446 -5.74709864 24.99779991 0.909539377 1.297285254 0.403346306 0.225747711 245.7359994 428346.6815 0.059831115 0.103020751 1.79E-06 5.74709864 0.387745877 T(ph)PQASTYSYETSDLCYTAEKK ddPTM_A459_MK2206_30min_R1 2 TPQASTYSYETSDLCYTAEKK 21 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.991)PQAS(0.003)T(0.002)Y(0.001)S(0.002)YETSDLCYTAEKK;T(0.999)PQAS(0.001)TYSYETSDLCYTAEKK 150.68 2.15E-06 16248900 2588.7 2841 2254.51 1847.77 1922.96 2232.5 2288.58 2142.96 2300.96 1892.64 TRUE FALSE 2368.517471 2656.050384 2101.480143 1990.085566 1846.364431 2358.902221 2135.913004 2124.224327 2540.153026 2127.114532 1.113488454 1.24866355 0.98794875 0.935579883 0.868013642 1.108968128 1.004136341 0.998641255 1.194177835 1 11.054682 -2.963265054 8.355437256 1.042522596 1.149364242 0 0.111812449 0 0 0.027021313 0 0.001088266 2.963265054 0.106841646 T(ph)PQASTYSYETSDLCYTAEKK ddPTM_A459_MK2206_30min_R2 3 TPQASTYSYETSDLCYTAEKK 21 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.975)PQAS(0.012)T(0.009)Y(0.001)S(0.002)Y(0.001)ETSDLCYTAEKK;T(1)PQASTYSYETSDLCYTAEKK;T(0.491)PQAS(0.076)T(0.121)Y(0.096)S(0.121)Y(0.096)ETSDLCYTAEKK 135.37 0.00010774 11148200 38776.7 43425 39187.1 48444.8 47123.7 34457 44294.9 33660.2 35902.2 42070.8 TRUE FALSE 41745.47397 41268.57765 40493.57836 44486.70487 45273.38676 35768.28528 38478.92642 38059.70371 39024.90846 40698.03324 1.025736888 1.014018967 0.994976296 1.093092254 1.112421981 0.878870118 0.945473856 0.935173046 0.958889296 1 15.31267146 -6.763355294 24.9999982 0.939741619 1.045712591 0.595456795 0.042929555 38.15386623 497848.7865 0.01553456 0.014387622 1.72E-07 6.763355294 0.105970972 T(ph)PQPGSPSPNTPCLPEAAVSQPGSAVASDWR ddPTM_A459_MK2206_30min_R1 1 TPQPGSPSPNTPCLPEAAVSQPGSAVASDWR 31 0 Q9Y4R8;H3BU45 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog 1 T(0.507)PQPGS(0.428)PS(0.064)PNT(0.001)PCLPEAAVSQPGSAVASDWR 103.54 7.95E-09 4274200 472.99 647.5 517.72 383.37 482.53 467.27 399.96 296.79 423.8 353.66 TRUE FALSE 432.7597167 605.3476323 482.5786089 412.8972238 463.3098083 493.7264236 373.2793982 294.1951963 467.8555266 397.4740708 1.088774711 1.522986471 1.214113434 1.038802916 1.165635301 1.24216008 0.939128928 0.740161983 1.177071817 1 8.634716939 -6.594045455 0.736874335 0.950980383 1.292198059 0.304655628 0.164670645 0.802452774 0.970237723 0.112833361 0.134587999 2.55E-07 6.594045455 0.341217676 T(ph)PQQTSASQQMLNFPDK ddPTM_A459_MK2206_30min_R2 1 TPQQTSASQQMLNFPDK 17 0 Q8TAQ2 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 1 T(1)PQQTSASQQMLNFPDK 184.2 1.46E-07 3122700 29542 27562 28721 28984 27699 21751 30648 25684 23206 27959 TRUE FALSE 31803.75823 26193.31116 29678.54381 26615.91448 26611.39808 22578.74955 26623.88079 29040.98699 25224.41593 27046.70012 1.175883124 0.968447576 1.097307386 0.984072525 0.98390554 0.834806074 0.984367064 1.073734942 0.932624528 1 14.72316497 -1.52287883 0.810901543 0.973651196 49.85936024 0.392207289 0.069423897 593.3163565 1.967519706 0.025269877 53335.94988 0.029999994 1.52287883 48.88570904 T(ph)PQSPAPCVLLR ddPTM_A459_MK2206_30min_R2 1 TPQSPAPCVLLR 12 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 T(0.966)PQS(0.034)PAPCVLLR 109.16 0.018141 6146900 14410 18820 17593 17222 16984 15733 17743 9429.3 13965 13459 TRUE FALSE 15513.24068 17885.42617 18179.54184 15814.90751 16317.12282 16331.73034 15413.32279 10661.74189 15179.65046 13019.83393 1.191508337 1.373706167 1.396295985 1.214678128 1.253251225 1.254373168 1.183834054 0.818884629 1.165886642 1 13.66842343 -7.5625065 6.665655976 0.993318861 1.2808011 0.62911842 0.098062615 0.120171626 14.42221467 0.045497804 0.026257529 2.74E-08 7.5625065 0.287482239 T(ph)PQSPTLPPAK ddPTM_A459_MK2206_30min_R1 2 TPQSPTLPPAK 11 0 P78310-7;P78310-2;P78310-6;P78310 P78310-7 CXADR Coxsackievirus and adenovirus receptor 1 T(0.972)PQS(0.009)PT(0.019)LPPAK;T(0.991)PQS(0.007)PT(0.003)LPPAK 140.91 0.0024502 21999000 10445.3 9230.1 6816.3 7801.7 10014.1 9993.8 11616 11255.2 11921.5 11750.5 TRUE FALSE 9556.872385 8629.218812 6353.628547 8402.588286 9615.217192 10559.64032 10841.11783 11156.79697 13160.78259 13206.24065 0.723663353 0.653419776 0.481108039 0.63625891 0.728081325 0.799594722 0.820908699 0.844812484 0.996557835 1 13.68893222 -7.32526184 0.699589535 0.99659169 0.611219906 0.808895223 0.06660116 0.323797512 0.311520346 0.062730965 0.039407155 4.73E-08 7.32526184 -0.385371784 T(ph)PQSPTLPPAK ddPTM_A459_MK2206_30min_R2 1 TPQSPTLPPAK 11 0 P78310-7;P78310-2;P78310-6;P78310 P78310-7 CXADR Coxsackievirus and adenovirus receptor 1 T(0.823)PQS(0.013)PT(0.165)LPPAK 112.64 0.017665 12669000 73930 43277 53039 50526 41094 55501 80365 42482 71940 71771 TRUE FALSE 79590.13764 41127.92711 54807.29379 46397.86418 39480.44308 57613.12945 69812.97896 48034.54326 78197.21116 69429.11815 1.14635098 0.592372886 0.78939925 0.668276732 0.568643879 0.829812202 1.005528816 0.691850113 1.126288411 1 16.08325323 -8.26421076 24.97178385 1.06314423 0.777691276 0.291505289 0.172055794 304.9641859 2747827.286 0.140811614 0.042749348 5.44E-09 8.26421076 -0.285452954 T(ph)PSASNDDQQE ddPTM_A459_MK2206_30min_R1 1 TPSASNDDQQE 11 0 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 T(0.496)PS(0.496)AS(0.009)NDDQQE 125.97 0.0075958 2286500 1409.6 1564.3 1012.9 977.26 960.04 960.34 923.45 945.79 942.19 792.44 TRUE FALSE 1289.706118 1462.463786 944.1471701 1052.528735 921.7995739 1014.713621 861.8483354 937.5210577 1040.134022 890.6134498 1.44810986 1.642085897 1.060108816 1.181801976 1.035016453 1.13934235 0.967701909 1.052668874 1.167884925 1 9.798655589 -5.267368107 24.9914677 1.078218111 1.545097891 0.849466537 0.079055867 139.4936082 588011.8679 0.019721015 0.042867322 5.40E-06 5.267368107 0.466879781 T(ph)PSASNDDQQE ddPTM_A459_MK2206_30min_R2 2 TPSASNDDQQE 11 0 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 T(0.495)PS(0.495)AS(0.009)NDDQQE;T(0.496)PS(0.496)AS(0.007)NDDQQE 177.44 0.00015138 15213900 55799 61293 57125 62529 55287 48504 44650 41018 45154 41510 TRUE FALSE 60071.01434 58249.27875 59029.51899 57420.18068 53116.15459 50349.85371 38787.40137 46379.19344 49081.4133 40155.5321 1.495958619 1.45059163 1.470022084 1.42994446 1.322760571 1.253870913 0.965929209 1.15498889 1.222282728 1 15.29331114 -6.702634865 1.600915777 1.09894919 1.465178453 0.832157511 0.074730206 0.150974725 0.802201052 0.032162406 0.030647306 1.98E-07 6.702634865 0.366229263 T(ph)PSFELPDASERPPTYCELVPR ddPTM_A459_MK2206_30min_R1 2 TPSFELPDASERPPTYCELVPR 22 1 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 T(0.426)PS(0.387)FELPDAS(0.187)ERPPTYCELVPR;T(0.775)PS(0.225)FELPDAS(0.001)ERPPTYCELVPR 93.416 0.00038073 67415000 1133.54 1306.69 1295.17 1064.69 1327.28 1371.92 1248.5 1385.86 1286.14 701.34 TRUE FALSE 1037.126471 1221.624243 1207.257469 1146.692608 1274.411627 1449.596925 1165.214843 1373.743572 1419.838855 788.227294 1.315770817 1.549837531 1.531610841 1.454774044 1.61680728 1.83905954 1.47827264 1.742826698 1.801306382 1 9.622467897 -3.613358611 0.774086042 1.605786422 8.41E-12 0.068558335 0.227854192 30.69760522 3.521844861 0.079639939 64.60099055 0.00024358 3.613358611 -1.605786422 T(ph)PSIDLQR ddPTM_A459_MK2206_30min_R2 2 TPSIDLQR 8 0 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 T(0.987)PS(0.013)IDLQR;T(0.998)PS(0.002)IDLQR 109.29 0.029263 8909000 35160 42043 39989 37367 30465 40571 38765 31642 31123 36305 TRUE FALSE 37851.87663 39955.20576 41322.2133 34313.99657 29268.79103 42114.95783 33675.10893 35777.71804 33830.02228 35120.37082 1.07777554 1.137664689 1.176588183 0.9770397 0.833385022 1.199160397 0.958848331 1.018716978 0.963259256 1 15.10002046 -5.76864955 24.97200075 0.994222477 1.131374998 0.344032154 0.087157104 180.6526237 625681.7034 0.02440419 0.037060317 1.70E-06 5.76864955 0.137152521 T(ph)PSPAAEDAREPEAK ddPTM_A459_MK2206_30min_R1 2 TPSPAAEDAREPEAK 15 1 Q92797 Q92797 SYMPK Symplekin 1 T(0.932)PS(0.068)PAAEDAREPEAK;T(0.804)PS(0.196)PAAEDAREPEAK 166.64 0.00081023 188532000 9570.6 9211 8606.5 7490.3 7740.3 6654.4 8592.8 7060.4 8975.6 9419 TRUE FALSE 8756.570213 8611.362226 8022.314759 8067.204204 7431.987461 7031.166377 8019.58999 6998.671667 9908.645739 10585.89683 0.827192098 0.813474981 0.757830431 0.762070926 0.702064981 0.664201294 0.757573035 0.661131672 0.936023267 1 13.36985588 -8.408529706 4.826244491 0.997012207 0.743673835 0.746930645 0.052846321 0.109208346 3.584250273 0.054797019 0.014294091 3.90E-09 8.408529706 -0.253338371 T(ph)PSPPPPIPEDIALGK ddPTM_A459_MK2206_30min_R1 2 TPSPPPPIPEDIALGK 16 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.762)PS(0.238)PPPPIPEDIALGK;T(0.989)PS(0.011)PPPPIPEDIALGK 143.05 0.00091856 10421800 2124.39 1849.03 1863.37 1571.15 1997.97 2156.56 1811.62 1912.18 1913.47 1738.58 TRUE FALSE 1943.699475 1728.657811 1736.889636 1692.160245 1918.386624 2278.662564 1690.770135 1895.462012 2112.382054 1953.968416 0.994744572 0.884690764 0.888903639 0.866012076 0.981789986 1.166171646 0.865300647 0.970057651 1.081072773 1 10.93219143 -6.445519212 6.653874065 1.012437271 0.906840243 0.29396609 0.078868586 0.335172177 24.09858685 0.025051825 0.028297835 3.58E-07 6.445519212 -0.105597028 T(ph)PSPPPPIPEDIALGK ddPTM_A459_MK2206_30min_R2 3 TPSPPPPIPEDIALGK 16 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.95)PS(0.05)PPPPIPEDIALGK;T(0.904)PS(0.096)PPPPIPEDIALGK;T(0.886)PS(0.114)PPPPIPEDIALGK 145.52 0.00087259 14773100 25436.5 29075 28140.1 31356.1 31720 26340.2 32915 24953.6 24614.8 29326 TRUE FALSE 27383.938 27631.17778 29078.27689 28794.20633 30474.51342 27342.59477 28593.22096 28215.1212 26755.75081 28369.09502 0.965273583 0.973988693 1.024998396 1.014985015 1.074215212 0.96381625 1.007900356 0.99457248 0.943130219 1 14.79203251 -9.965545397 11.43023368 0.999995828 0.998326972 0 0.035743777 0 0 0.035528984 0.008617044 1.08E-10 9.965545397 -0.001668855 T(ph)PSPSPPCSSSPSPSGR ddPTM_A459_MK2206_30min_R1 2 TPSPSPPCSSSPSPSGR 17 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 T(0.56)PS(0.179)PS(0.26)PPCSSSPSPSGR;T(0.868)PS(0.132)PSPPCSSSPSPSGR 182.57 1.61E-07 12247400 1593.51 1456.84 1432.27 1393.39 1519.22 1427.43 1885.6 1429.83 1072.16 1198.92 TRUE FALSE 1457.973607 1361.999451 1335.051503 1500.709139 1458.70625 1508.249853 1759.815064 1417.329147 1183.614869 1347.451261 1.08202326 1.010796821 0.99079762 1.113739089 1.082566986 1.119335368 1.306032445 1.051859305 0.878410153 1 10.39601737 -3.776832196 15.60903786 1.071716966 45.08667491 0 0.105983695 0 0 0.025405972 0 0.000167174 3.776832196 44.01495795 T(ph)PSPSPPCSSSPSPSGR ddPTM_A459_MK2206_30min_R2 1 TPSPSPPCSSSPSPSGR 17 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 T(0.908)PS(0.087)PS(0.005)PPCSSSPSPSGR 166.9 3.28E-06 10364000 11279 8854.8 9236.5 9326.6 9895.7 10477 10213 13173 10089 11972 TRUE FALSE 12142.52891 8415.083508 9544.4403 8564.586946 9507.145096 10875.70958 8872.020832 14894.75633 10966.52298 11581.35462 1.048454979 0.726606151 0.824121237 0.739515128 0.820900957 0.939070595 0.766060718 1.286097941 0.946911941 1 13.49951639 -7.741458345 24.9959847 1.08737882 0.832477024 0.446224335 0.122200497 186.5119539 233324.2158 0.054260725 0.031275151 1.81E-08 7.741458345 -0.254901796 T(ph)PSPSQPK ddPTM_A459_MK2206_30min_R1 2 TPSPSQPK 8 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 T(0.99)PS(0.01)PSQPK;T(0.998)PS(0.002)PSQPK 135.43 0.0062169 127493000 21712.8 22073.8 20647.4 18514.2 17943.5 17413.3 16780.1 15960.7 13657.8 14509.4 TRUE FALSE 19866.01234 20636.79161 19245.91201 19940.16689 17228.7724 18399.226 15660.73015 15821.15728 15077.57718 16306.93401 1.218255518 1.265522482 1.18022873 1.222802942 1.056530454 1.12830689 0.960372449 0.970210419 0.924611406 1 13.99319794 -6.708647564 0.852717667 0.94916222 1.240313763 0.865760145 0.043684291 0.190258398 0.303023813 0.026012506 0.02586544 1.96E-07 6.708647564 0.291151543 T(ph)PSSEEISPTK ddPTM_A459_MK2206_30min_R1 2 TPSSEEISPTK 11 0 J3QLT3;E7ENF8;A0A1W2PRI7;Q15311 J3QLT3 RALBP1 RalA-binding protein 1 1 T(0.943)PS(0.052)S(0.005)EEISPTK;T(0.509)PS(0.246)S(0.246)EEISPTK 160.72 0.0014064 42457000 6640.2 6553.1 6348.6 4830.9 5405.4 5995.2 6985.6 4988.8 7377.6 7716.1 TRUE FALSE 6075.416121 6126.491999 5917.67472 5202.976755 5190.091472 6334.643043 6519.60337 4945.183448 8144.527921 8672.028722 0.700576107 0.706465833 0.68238643 0.59997227 0.598486426 0.730468411 0.751796792 0.57024528 0.939172157 1 13.08215382 -8.367615304 5.228891158 0.992781818 0.67015544 0.813418799 0.058032323 0.09335395 3.580949825 0.057573648 0.015024062 4.29E-09 8.367615304 -0.322626378 T(ph)PSSEEISPTKFPGLYR ddPTM_A459_MK2206_30min_R1 1 TPSSEEISPTKFPGLYR 17 1 J3QLT3;E7ENF8;A0A1W2PRI7;Q15311 J3QLT3 RALBP1 RalA-binding protein 1 1 T(0.417)PS(0.417)S(0.167)EEISPTKFPGLYR 110.57 0.021943 29650000 2130 2329.8 2150.6 2149.5 2441.9 1944.7 2016.4 2608.3 1885.9 1337 TRUE FALSE 1948.832315 2178.129597 2004.623264 2315.054862 2344.633952 2054.807233 1881.889635 2585.495908 2081.946054 1502.637654 1.296940956 1.449537479 1.334069633 1.540660755 1.560345534 1.367466886 1.252390841 1.720638307 1.385527674 1 10.55328144 -8.558784122 23.01619531 0.999999997 1.443024629 0.495096546 0.132540795 5289.937347 3390968.139 0.127308018 0.032870789 2.76E-09 8.558784122 0.443024631 T(ph)PSSPSKSPASFEIPASAMEANGVDGDGLNKPAK ddPTM_A459_MK2206_30min_R1 2 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAK 34 2 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2;H0YA73 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.764)PS(0.078)S(0.07)PS(0.07)KS(0.015)PAS(0.002)FEIPASAMEANGVDGDGLNKPAK;T(0.574)PS(0.137)S(0.137)PS(0.137)KS(0.01)PAS(0.003)FEIPASAMEANGVDGDGLNKPAK 71.423 6.62E-05 89118000 4728.6 4720.9 5140.6 5009.8 4383.6 3703.4 3805.9 4583.1 3915.1 3328.6 TRUE FALSE 4326.407739 4413.568552 4791.670395 5395.655664 4208.99193 3913.083308 3552.015355 4543.03044 4322.088655 3740.972098 1.156492918 1.179791893 1.280862372 1.442313795 1.125106475 1.046007082 0.949489935 1.214398376 1.155338383 1 11.86919749 -6.502996202 24.14362886 1.079483486 1.262903616 0.454563329 0.099515795 504.7554013 612931.8239 0.033220047 0.037129387 3.14E-07 6.502996202 0.18342013 T(ph)PSSPSKSPASFEIPASAMEANGVDGDGLNKPAK ddPTM_A459_MK2206_30min_R2 1 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAK 34 2 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2;H0YA73 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.59)PS(0.16)S(0.16)PS(0.072)KS(0.015)PAS(0.003)FEIPASAMEANGVDGDGLNKPAK 70.605 8.22E-05 35511000 45249 71251 56764 66553 69754 35804 66565 51310 52099 66510 TRUE FALSE 48713.29823 67712.77895 58656.48343 61115.40701 67015.10747 37166.54631 57824.93554 58016.39317 56630.47685 64339.78415 0.757125609 1.052424714 0.911667395 0.949885173 1.041581167 0.577660413 0.898743076 0.901718803 0.880178223 1 15.97342348 T(ph)PSSQNLLALLAR ddPTM_A459_MK2206_30min_R1 1 TPSSQNLLALLAR 13 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 T(0.885)PS(0.109)S(0.007)QNLLALLAR 141.34 0.0019498 37253000 568.22 556.91 640.44 530.32 781.41 721.05 916.12 623.51 811.25 657.69 TRUE FALSE 519.8899052 520.6550578 596.9687172 571.1653383 750.284785 761.8752279 855.0073064 618.0587178 895.5823406 739.1696025 0.703343189 0.70437834 0.807620761 0.772712157 1.015037391 1.030717748 1.156713295 0.83615278 1.211606021 1 9.529761619 -6.238861632 2.462058515 1.045029431 0.735837511 0.691214854 0.096790789 0.165980373 1.98439791 0.030232351 0.039006117 5.77E-07 6.238861632 -0.30919192 T(ph)PSSSSTLAYSPR ddPTM_A459_MK2206_30min_R2 2 TPSSSSTLAYSPR 13 0 H3BR17;Q6Q0C0;A0A087WUB0 H3BR17 TRAF7 E3 ubiquitin-protein ligase TRAF7 1 T(0.67)PS(0.264)S(0.059)S(0.003)S(0.001)T(0.003)LAYSPR;T(0.875)PS(0.115)S(0.006)S(0.003)STLAYSPR 113.99 0.010245 38590000 75714 64478 69571 88010 53374 70654 86166 63933 59849 81003 TRUE FALSE 81510.72205 61276.11628 71890.46242 80819.30147 51278.26858 73342.78748 74852.3007 72289.26261 65054.55784 78359.87874 1.040209905 0.781983296 0.917439684 1.03138625 0.654394435 0.935973723 0.955237577 0.922529026 0.83020238 1 16.25782754 T(ph)PSTEAAHIMLR ddPTM_A459_MK2206_30min_R2 1 TPSTEAAHIMLR 12 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 T(0.781)PS(0.19)T(0.029)EAAHIMLR 131.35 0.0027624 3654800 13107 14459 14350 14617 11818 11634 15068 12177 11572 14436 TRUE FALSE 14110.482 13740.98709 14828.42184 13422.74434 11353.96594 12076.74002 13089.5535 13768.57571 12578.51164 13964.9545 1.010420907 0.983962181 1.061831017 0.96117351 0.813032791 0.86478907 0.937314439 0.985937742 0.900719844 1 13.76952325 -5.998485458 24.93349189 0.912164964 1.014634109 0.414086551 0.05401725 49.20250012 809963.2457 0.015983807 0.023507768 1.00E-06 5.998485458 0.102469145 T(ph)PSTSDMAEEGR ddPTM_A459_MK2206_30min_R2 1 TPSTSDMAEEGR 12 0 Q9HCH0 Q9HCH0 NCKAP5L Nck-associated protein 5-like 1 T(0.481)PS(0.231)T(0.231)S(0.057)DMAEEGR 113.69 0.013678 3523500 13602 14450 15103 11063 11413 9440.8 9803.8 10466 8262.7 11703 TRUE FALSE 14643.37958 13732.43401 15606.52648 10159.11751 10964.86827 9800.076259 8516.549284 11833.94214 8981.37471 11321.13207 1.293455415 1.212991239 1.378530556 0.897358802 0.96853108 0.865644549 0.752270112 1.045296713 0.793328322 1 13.46673061 -5.769591821 24.99973518 0.899959575 1.286792296 0.792930978 0.091709684 71.55503287 219426.3223 0.02476118 0.037445464 1.70E-06 5.769591821 0.386832721 T(ph)PSVSAPLALSCPR ddPTM_A459_MK2206_30min_R1 1 TPSVSAPLALSCPR 14 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 T(0.998)PS(0.002)VSAPLALSCPR 119.77 0.0047077 0 1466.1 1495.9 1379.9 1218.8 1076.7 1282.9 1208.1 900.22 1161.3 1177 TRUE FALSE 1341.400496 1398.516638 1286.236233 1312.672187 1033.812759 1355.536689 1127.509853 892.3494714 1282.021291 1322.815646 1.014049464 1.057227167 0.972347308 0.992331918 0.781524442 1.024735906 0.852356 0.674583397 0.969160967 1 10.3693963 -6.108865661 6.781398588 0.873113031 1.012996497 0.271302739 0.100098802 0.317015101 17.27437393 0.029563485 0.03839606 7.78E-07 6.108865661 0.139883466 T(ph)PSVSAPLALSCPR ddPTM_A459_MK2206_30min_R2 1 TPSVSAPLALSCPR 14 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 T(0.755)PS(0.242)VS(0.003)APLALSCPR 123.1 0.0039241 5742600 20744 16156 17227 18615 20001 15798 15081 10744 15446 14632 TRUE FALSE 22332.17659 15353.71653 17801.33958 17094.09495 19215.66024 16399.20396 13100.84658 12148.27769 16789.46516 14154.55904 1.577737359 1.084718817 1.257639997 1.207674143 1.357559793 1.158581056 0.925556674 0.858259 1.18615247 1 13.78897918 -7.053675225 4.153359396 0.983147513 1.277621074 0.503728171 0.141470666 0.189711857 6.730031754 0.053333186 0.04203826 8.84E-08 7.053675225 0.294473561 T(ph)PSYSISSTLNPQAPEFILGCTASK ddPTM_A459_MK2206_30min_R2 1 TPSYSISSTLNPQAPEFILGCTASK 25 0 Q14694;Q14694-3;Q14694-2;H3BQC6 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 T(0.591)PS(0.245)Y(0.048)S(0.045)IS(0.045)S(0.013)T(0.013)LNPQAPEFILGCTASK 61.25 0.0079849 8126300 40418 35576 36952 36426 25629 27957 25491 22575 15795 26107 TRUE FALSE 43512.43316 33809.34757 38183.96124 33449.87928 24622.67668 29020.92323 22144.00108 25525.63001 17168.82055 25255.13073 1.722914588 1.33871204 1.511928869 1.324478564 0.974957404 1.149109998 0.876811976 1.010710667 0.679815153 1 14.62428889 -6.017239937 0.654954102 0.869202522 1.66631652 0.798606444 0.134085549 0.426396395 0.353114285 0.078455137 0.205648465 9.61E-07 6.017239937 0.797113998 T(ph)PTAPAVNLAGAR ddPTM_A459_MK2206_30min_R1 2 TPTAPAVNLAGAR 13 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(1)PTAPAVNLAGAR;T(1)PTAPAVNLAGAR 147.7 0.0013245 34314000 1245.92 1057.15 1186.37 957.75 884.48 719.7 1057.85 866.74 882.69 1150.28 TRUE FALSE 1139.947961 988.3293429 1105.84251 1031.516071 849.2492887 760.448792 987.2827567 859.1621836 974.4487842 1292.785371 0.881776656 0.764496076 0.855395284 0.79790203 0.656914371 0.588225091 0.763686517 0.664582229 0.753759136 1 10.33626706 -6.077638509 6.083537692 0.715260977 0.827034132 0.121796297 0.107123995 0.374011587 23.24086752 0.030060506 0.039333831 8.36E-07 6.077638509 0.111773155 T(ph)PTAPAVNLAGAR ddPTM_A459_MK2206_30min_R2 3 TPTAPAVNLAGAR 13 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(1)PTAPAVNLAGAR;T(1)PTAPAVNLAGAR;T(0.999)PT(0.001)APAVNLAGAR 122.52 0.0061535 53213000 14480 15985.7 15854.5 12649 12272.5 20082.7 12541.9 7916.5 11978.6 11389 TRUE FALSE 15588.59993 15191.87338 16383.08112 11615.53624 11790.61999 20846.96122 10895.13346 8951.213731 13020.47698 11017.37786 1.414910165 1.378901003 1.487021805 1.054292263 1.070183862 1.892189002 0.988904402 0.812463169 1.181812691 1 13.42749328 -7.460741067 24.99978252 0.978413882 1.365166312 0.394132253 0.234157803 236.0688159 94977.2508 0.098571048 0.066456485 3.46E-08 7.460741067 0.38675243 T(ph)PTDPGLDSALEPSGDPHGK ddPTM_A459_MK2206_30min_R1 2 TPTDPGLDSALEPSGDPHGK 20 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 T(0.933)PT(0.067)DPGLDSALEPSGDPHGK;T(0.722)PT(0.171)DPGLDS(0.107)ALEPSGDPHGK 120.66 0.00033831 8650100 5451.4 5378.2 4217.2 4035 4095.3 4136.3 4159.6 3430.46 3147.61 3842.5 TRUE FALSE 4987.729804 5028.078202 3930.948214 4345.776399 3932.175529 4370.493731 3882.120674 3400.46785 3474.815323 4318.537909 1.154957976 1.164301045 0.910249787 1.006307341 0.910533984 1.012030882 0.898943289 0.787411833 0.804627723 1 12.07632724 -4.240449489 0.474009086 0.871641082 1.603674464 0.587207321 0.078302712 5.357875819 0.633256119 0.051666365 2.438560629 5.75E-05 4.240449489 0.732033382 T(ph)PTDPGLDSALEPSGDPHGK ddPTM_A459_MK2206_30min_R2 2 TPTDPGLDSALEPSGDPHGK 20 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 T(0.829)PT(0.171)DPGLDSALEPSGDPHGK;T(0.969)PT(0.031)DPGLDSALEPSGDPHGK 198.45 1.78E-15 22317000 162364 145860 137984 164572 128293 107010 126113 94210 86616 121336 TRUE FALSE 174794.7127 138616.8045 142584.3177 151125.9412 123255.5722 111082.3405 109554.2116 106523.5705 94149.70311 117376.8163 1.489175787 1.180955566 1.214757072 1.287528031 1.050084473 0.946373774 0.933354772 0.907535013 0.802114984 1 16.84078796 -6.408155291 1.076151995 0.890412876 1.316907408 0.799643162 0.08867359 0.218772111 0.535553044 0.040654321 0.052738886 3.91E-07 6.408155291 0.426494532 T(ph)PTPEPAEVETR ddPTM_A459_MK2206_30min_R1 1 TPTPEPAEVETR 12 0 F8W6G1;Q9UHY1 F8W6G1 NRBP1 Nuclear receptor-binding protein 1 T(0.582)PT(0.418)PEPAEVETR 139.74 0.0026483 52109000 1388.1 1534.5 1514.9 1456.8 1441.3 1155.1 1698.7 1660.9 1313 1162.1 TRUE FALSE 1270.034806 1434.603771 1412.072809 1569.002988 1383.889969 1220.500764 1585.382822 1646.378926 1449.491049 1306.069721 0.972409654 1.098412855 1.08116189 1.20131641 1.059583532 0.934483622 1.213857726 1.260559754 1.109811387 1 10.3510162 -7.30703093 24.99988848 1.167770532 1.067389706 0.155581324 0.093848157 726.950889 398616.8497 0.039479377 0.026617154 4.93E-08 7.30703093 -0.100380826 T(ph)PTPPAPTLLK ddPTM_A459_MK2206_30min_R2 1 TPTPPAPTLLK 11 0 Q14686 Q14686 NCOA6 Nuclear receptor coactivator 6 1 T(0.743)PT(0.257)PPAPTLLK 117.25 0.01322 3619900 29711 33593 33459 41236 33197 28716 39162 33394 24405 38657 TRUE FALSE 31985.697 31924.82047 34574.50636 37866.88689 31893.51898 29808.8075 34019.98236 37758.71046 26527.70279 37395.62526 0.85533259 0.853704685 0.924560189 1.012602053 0.852867649 0.797120179 0.90973161 1.009709296 0.709379843 1 15.19058189 -10.58420598 4.213456849 1.000012004 0.88633294 0.142285504 0.086943257 55586634.19 4.22186E+11 11507172.43 0.02145188 2.60E-11 10.58420598 -0.113679065 T(ph)PTQTNGSNVPFKPR ddPTM_A459_MK2206_30min_R2 1 TPTQTNGSNVPFKPR 15 1 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347 A0A494C1K3 GTF2I General transcription factor II-I 1 T(0.909)PT(0.087)QT(0.005)NGSNVPFKPR 115.12 0.018772 0 28679 34505 17273 29371 42253 37634 29627 18470 39233 29079 TRUE FALSE 30874.68629 32791.53187 17848.8732 26971.29535 40593.93492 39066.18824 25736.93931 20884.09242 42645.41542 28130.15461 1.097565467 1.165707488 0.634510313 0.958803665 1.443075428 1.3887655 0.914923493 0.742409443 1.516003592 1 14.77982986 T(ph)PTSTPVHVK ddPTM_A459_MK2206_30min_R2 1 TPTSTPVHVK 10 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 T(0.686)PT(0.142)S(0.142)T(0.03)PVHVK 89.356 0.041969 4813100 52114 53812 50154 56845 55017 54070 51623 35667 40389 52131 TRUE FALSE 56103.88791 51139.77433 51826.10933 52200.58166 52856.75614 56127.67174 44844.83809 40328.79936 43901.96221 50429.96974 1.112510838 1.014075055 1.02768472 1.035110311 1.048121909 1.112982459 0.889249752 0.799699059 0.870553015 1 15.62199374 -7.324216034 6.954018841 0.871781883 1.053334142 0.6796396 0.056108403 0.140695364 13.27252235 0.022880012 0.01538862 4.74E-08 7.324216034 0.181552259 T(ph)PVQDHR ddPTM_A459_MK2206_30min_R2 2 TPVQDHR 7 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(1)PVQDHR;T(1)PVQDHR 102.52 0.026062 8757900 35060 21433.5 25277 26224 28274 23664 25125 51817 47287 35210 TRUE FALSE 37744.22056 20369.14356 26119.72256 24081.41531 27163.82069 24564.5501 21826.05732 58589.65981 51399.93778 34061.10058 1.108132735 0.598017774 0.766849048 0.707006377 0.79750273 0.721190733 0.640791312 1.720134077 1.509050997 1 15.05583743 -7.754168209 24.99999923 1.460944437 0.754193739 0.659310599 0.212094163 82.65163997 284178.4763 0.095977169 0.053952866 1.76E-08 7.754168209 -0.706750698 T(ph)PVSDDAESTSMFDMR ddPTM_A459_MK2206_30min_R1 1 TPVSDDAESTSMFDMR 16 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 T(1)PVSDDAESTSMFDMR 134.88 0.00098876 0 208.23 0 223 175.59 174.13 183.86 226.9 113.01 142.46 135.69 TRUE FALSE 190.518945 0 207.8633813 189.1139722 167.1940334 194.2699943 211.763915 112.0219655 157.2692268 152.5003016 1.249302087 0 1.36303587 1.240089169 1.096352149 1.273899083 1.38861309 0.734568813 1.031271579 1 7.252668286 -5.297960592 24.9997978 1.147036137 0.624649702 0.276051066 0.334345034 605.3827017 414400.4342 0.083027356 0.172843248 5.04E-06 5.297960592 -0.522386435 T(ph)QLSQAEVHK ddPTM_A459_MK2206_30min_R2 1 TQLSQAEVHK 10 0 A0A140TA76;K7EMZ9 A0A140TA76 LSM14A 1 T(0.873)QLS(0.127)QAEVHK 86.756 0.046924 6477400 29483 35029 38665 41000 35948 27512 40358 25210 24134 46853 TRUE FALSE 31740.24115 33289.5108 39954.0718 37650.16885 34536.5009 28558.98844 35058.94612 28505.03356 26233.1317 45324.19045 0.700293614 0.734475574 0.881517605 0.830685964 0.761988257 0.630104767 0.773515109 0.628914345 0.578788754 1 15.46799363 -6.536596212 23.65711807 0.701582817 0.790599115 0.048309196 0.118690072 280.3515476 483487.8273 0.037838083 0.037862205 2.91E-07 6.536596212 0.089016298 T(ph)QMELLQAGLSR ddPTM_A459_MK2206_30min_R1 1 TQMELLQAGLSR 12 0 Q9P2D1 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 T(1)QMELLQAGLSR 103.11 0.014909 10598000 1871.5 1518.1 1520.7 1264.3 1665.5 1608.7 1639.5 1436.7 1450 1271 TRUE FALSE 1712.319097 1419.271414 1417.479121 1361.676605 1599.159608 1699.783204 1530.131946 1424.139083 1600.732689 1428.461076 1.198715965 0.99356674 0.992312038 0.953247259 1.119498204 1.189940162 1.071175108 0.996974372 1.120599445 1 10.48024601 -4.747104115 24.93138766 1.051096476 1.198716357 0.283704549 0.07146327 1092.708607 1900289.192 0.019297566 0.402192962 1.79E-05 4.747104115 0.147619881 T(ph)QSAPLPQNAQALQHLVIQQQHQQFLEK ddPTM_A459_MK2206_30min_R1 2 TQSAPLPQNAQALQHLVIQQQHQQFLEK 28 0 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 T(0.5)QS(0.5)APLPQNAQALQHLVIQQQHQQFLEK;T(0.667)QS(0.333)APLPQNAQALQHLVIQQQHQQFLEK 116.97 3.26E-12 78663000 10171.3 9142.3 9909.5 7433.8 8036.3 6850.6 8759.5 8990.6 8012.1 7187.6 TRUE FALSE 9306.177523 8547.134608 9236.870749 8006.352564 7716.197154 7238.475052 8175.169738 8911.996132 8844.986467 8078.054152 1.15203208 1.058068496 1.143452442 0.991123904 0.95520493 0.896066666 1.012022151 1.103235503 1.094940229 1 12.9797921 -5.767198854 24.99647972 1.005179548 1.111872761 0.401770958 0.061523329 158.566615 688192.0369 0.019510741 0.029847863 1.71E-06 5.767198854 0.106693212 T(ph)QSAPLPQNAQALQHLVIQQQHQQFLEK ddPTM_A459_MK2206_30min_R2 2 TQSAPLPQNAQALQHLVIQQQHQQFLEK 28 0 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 T(0.891)QS(0.109)APLPQNAQALQHLVIQQQHQQFLEK;T(0.717)QS(0.283)APLPQNAQALQHLVIQQQHQQFLEK 147.71 3.73E-14 27904600 107580 127440 121881 121932 115568 105635 143019 93836 87779 115195 TRUE FALSE 115816.4075 121111.5149 125944.4517 111969.7656 111030.2196 109655.0139 124240.4335 106100.6874 95413.85875 111436.1966 1.039306895 1.086823838 1.13019338 1.004788112 0.996356866 0.984016121 1.114901956 0.952120502 0.856219628 1 16.7658584 -7.002779874 0.572574264 0.943407038 1.080297534 0.324693851 0.063537023 1.087121259 0.7569599 0.059245648 0.056199151 9.94E-08 7.002779874 0.136890497 T(ph)QSASPPPKER ddPTM_A459_MK2206_30min_R2 1 TQSASPPPKER 11 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 T(0.558)QS(0.403)AS(0.039)PPPKER 122.19 0.043777 3733500 12665 18947 18428 20430 20282 18504 19054 17802 16123 17384 TRUE FALSE 13634.64214 18006.11953 19042.38032 18760.80365 19485.62677 19208.18269 16552.18691 20128.78252 17525.3494 16816.7615 0.810776922 1.070724558 1.132345269 1.115601458 1.158702689 1.14220462 0.984267209 1.196947612 1.042135811 1 14.03761228 -4.76335899 4.047668372 1.10407886 0.779687429 0.626346706 0.065600931 0.144172038 4.490373719 0.015480206 0.140924796 1.72E-05 4.76335899 -0.324391431 T(ph)QSLPVTEK ddPTM_A459_MK2206_30min_R2 1 TQSLPVTEK 9 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.929)QS(0.067)LPVT(0.003)EK 120.55 0.015303 20217000 52052 43556 63949 50584 44861 34972 45612 36680 43625 55823 TRUE FALSE 56037.14114 41393.07238 66081.02774 46451.12539 43099.53173 36302.88397 39623.08961 41474.20194 47419.42364 54001.50008 1.037696009 0.766517084 1.223688743 0.86018213 0.798117305 0.672256954 0.733740536 0.768019442 0.878113082 1 15.72071186 -5.988687154 24.99716399 0.790138992 0.994507818 0.308165167 0.132581998 252.8196462 558631.7208 0.036169243 0.053599033 1.03E-06 5.988687154 0.204368825 T(ph)QSPGGCSAEAVLAR ddPTM_A459_MK2206_30min_R2 1 TQSPGGCSAEAVLAR 15 0 Q96MH2;K7ESM2;K7ELS4;K7EJA3;K7ERG7 Q96MH2 HEXIM2 Protein HEXIM2 1 T(0.975)QS(0.025)PGGCSAEAVLAR 194.1 7.48E-05 163780000 199780 239510 165160 234210 249960 199980 246450 203140 169090 188140 TRUE FALSE 215075.3104 227616.2817 170666.352 215074.2938 240145.3145 207590.379 214090.819 229691.0955 183797.1426 182001.0072 1.181725935 1.250631989 0.937722019 1.181720349 1.319472448 1.140600166 1.176316671 1.262032002 1.009868821 1 17.47358691 -8.283164008 22.44912873 1.004934019 1.178570933 0.351878717 0.095674144 293.5891242 303369.9347 0.093662234 0.024326001 5.21E-09 8.283164008 0.173636915 T(ph)QSSASLAASYAAQQHPQAAASYR ddPTM_A459_MK2206_30min_R2 1 TQSSASLAASYAAQQHPQAAASYR 24 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 T(0.679)QS(0.117)S(0.182)AS(0.021)LAASYAAQQHPQAAASYR 136.24 1.08E-07 6287500 4202.9 6591.8 4426.2 4540.8 4899.8 5435.3 7402.2 4957 4063.4 4624.6 TRUE FALSE 4524.677255 6264.460797 4573.767299 4169.802115 4707.409232 5642.14415 6430.282248 5604.89692 4416.827187 4473.699681 1.011394948 1.400286395 1.022367978 0.932070191 1.052240778 1.261180802 1.437352238 1.252854979 0.987287369 1 12.1272527 -6.760140066 24.99994297 1.219139592 1.089433628 0.071433186 0.16901551 82.75250667 1592242.732 0.059878508 0.056772246 1.74E-07 6.760140066 -0.129705964 T(ph)QSSLTVSEVLTR ddPTM_A459_MK2206_30min_R1 1 TQSSLTVSEVLTR 13 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 T(0.896)QS(0.093)S(0.004)LT(0.001)VS(0.006)EVLTR 162.76 0.00084948 67368000 2318.2 2812.3 2613.1 2227.4 1697.3 1939.5 1892.4 1993.4 2177.3 2268.8 TRUE FALSE 2121.024917 2629.218759 2435.730053 2398.954734 1629.692947 2049.312814 1766.161449 1975.971914 2403.638127 2549.876073 0.831814902 1.031116291 0.955234679 0.940812285 0.639126334 0.803691142 0.692645995 0.774928607 0.942648999 1 11.31621142 -6.05458943 23.63105462 0.79137835 0.948471814 0.245151924 0.109654656 196.0069654 84848.25802 0.03129973 0.040408165 8.82E-07 6.05458943 0.157093464 T(ph)QSSLTVSEVLTR ddPTM_A459_MK2206_30min_R2 2 TQSSLTVSEVLTR 13 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 T(0.99)QS(0.009)SLTVSEVLTR;T(0.582)QS(0.209)S(0.209)LTVSEVLTR 173.19 0.00036472 89476000 35887 41590 40217 40426 39954 33950 45800 30515 34552 39988 TRUE FALSE 38634.53631 39524.70108 41557.81471 37123.06648 38385.20521 35241.99104 39786.40498 34503.41527 37557.2705 38683.19483 0.998742128 1.021753794 1.074311853 0.959669093 0.992296665 0.911041376 1.028519106 0.89194844 0.970893709 1 15.23941933 -5.785923674 24.76021502 0.961954588 1.030617709 0.347992692 0.041690383 203.3183195 205608.7014 0.011221792 0.016653492 1.64E-06 5.785923674 0.068663121 T(ph)QSSLTVSEVLTRR ddPTM_A459_MK2206_30min_R2 1 TQSSLTVSEVLTRR 14 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 T(0.457)QS(0.457)S(0.085)LT(0.001)VSEVLTRR 88.319 0.039641 0 3228 5495.7 4868.1 5462.5 5640.7 5337.1 4979.7 3707.5 5558 5103.7 TRUE FALSE 3475.138162 5222.791529 5030.400024 5016.196276 5419.217776 5540.20708 4325.859408 4192.08298 6041.424793 4937.166687 0.703872966 1.057851975 1.018883976 1.016007073 1.097637191 1.122143009 0.876182572 0.849086783 1.22366231 1 12.26946764 -4.75773264 24.96654015 1.023884551 0.703872503 0.465066907 0.104492488 99.35776236 669118.8534 0.026248679 0.190451812 1.75E-05 4.75773264 -0.320012048 T(ph)QTPPVEENVTQK ddPTM_A459_MK2206_30min_R1 1 TQTPPVEENVTQK 13 0 Q6P1Q9-2;Q6P1Q9 Q6P1Q9-2 METTL2B Methyltransferase-like protein 2B 1 T(0.532)QT(0.468)PPVEENVTQK 164.7 0.00084805 7398900 2568.2 2918.5 3108.3 2696.6 2090 1877.9 2276 2342.2 2076.2 2288.8 TRUE FALSE 2349.761104 2728.50512 2897.317256 2904.292599 2006.750874 1984.225075 2124.172193 2321.722392 2292.02842 2572.353824 0.913467301 1.060703662 1.126329212 1.12904087 0.780122414 0.771365532 0.825769835 0.902567279 0.891023777 1 11.32887338 -6.260784189 24.99932913 0.850612456 1.062546861 0.567767901 0.083206289 42.91096414 1637299.072 0.026133778 0.031719757 5.49E-07 6.260784189 0.211934405 T(ph)RDLGGGAAIDDIEFK ddPTM_A459_MK2206_30min_R1 1 TRDLGGGAAIDDIEFK 16 1 Q5VYJ5 Q5VYJ5 MALRD1 MAM and LDL-receptor class A domain-containing protein 1 1 T(1)RDLGGGAAIDDIEFK 103.21 0.046885 14720000 4169.6 4425.2 4564.3 3917.6 4745.1 4035.2 4592.3 4231.9 3608.4 3683.4 TRUE FALSE 3814.953625 4137.118676 4254.488033 4219.334231 4556.092619 4263.669537 4285.956046 4194.900944 3983.506093 4139.7274 0.921547062 0.999369832 1.027721785 1.019229969 1.100577931 1.029939686 1.035323255 1.013327821 0.9622629 1 12.01532005 -4.729113667 2.144654059 1.02737208 0.883195237 0.464275603 0.032700777 0.727672423 3.402930314 0.009079835 0.214644671 1.87E-05 4.729113667 -0.144176843 T(ph)RHSPTPQQSNR ddPTM_A459_MK2206_30min_R2 1 TRHSPTPQQSNR 12 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(1)RHSPTPQQSNR 96.604 0.023487 672670 584.51 0 378.01 489.66 0 0 374.95 633.55 652.11 526.73 TRUE FALSE 629.260535 0 390.6126647 449.6532117 0 0 325.7186146 716.3571603 708.8293491 509.5428432 1.234951179 0 0.76659435 0.882463992 0 0 0.639236953 1.405882096 1.391108439 1 8.993059646 -7.675952882 4.914440113 1.297292615 0.458456136 0.430280402 0.40318056 0.186300902 7.745088746 0.20141307 0.111238046 2.11E-08 7.675952882 -0.838836479 T(ph)RKSPSSDSWTCADTSTER ddPTM_A459_MK2206_30min_R2 1 TRKSPSSDSWTCADTSTER 19 2 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;H0YIQ0 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 T(0.582)RKS(0.349)PS(0.069)SDSWTCADTSTER 86.016 0.011923 9685300 4555.7 9166.5 7348.5 8538 8627.3 7311.8 8649.6 6404.9 7746.3 5872 TRUE FALSE 4904.487895 8711.304939 7593.495322 7840.418088 8288.548853 7590.055673 7513.89713 7242.042421 8420.059172 5680.397121 0.863405813 1.533573226 1.336789517 1.380258796 1.459149541 1.336183987 1.32277673 1.274918332 1.482301148 1 12.47177608 -10.68073115 5.370335969 0.999989748 1.341521218 0.243831261 0.174777716 2.00E-05 3.13E-06 0.157575203 0.038216454 2.09E-11 10.68073115 0.341531469 T(ph)RKY(ph)AT(ph)MK ddPTM_A459_MK2206_30min_R2 1 TRKYATMK 8 2 G3V5L8;G3V3N8;Q9Y324 G3V5L8 FCF1 rRNA-processing protein FCF1 homolog 3 T(1)RKY(1)AT(1)MK 49.423 0.046606 3314800 2174.6 14023 9268.1 29603 15770 38778 8977.1 12894 25942 10882 TRUE FALSE 2341.089048 13326.63821 9577.093828 27184.3402 15150.79056 40253.72396 7798.395987 14579.29007 28198.38827 10526.92123 0.222390668 1.265957816 0.909771586 2.58236379 1.439242323 3.823883838 0.74080501 1.384952899 2.678692815 1 13.36179594 -5.686778629 8.628135067 1.971567499 0.836987706 0.258555546 0.891953751 0.398765887 41.50659802 0.236886116 0.410620226 2.06E-06 5.686778629 -1.134579792 T(ph)RLS(ph)S(ph)PRGGS(ph)SS(ph)RR ddPTM_A459_MK2206_30min_R2 1 TRLSSPRGGSSSRR 14 3 Q12830-4;Q12830;Q12830-2;F5GXF5 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 5 T(1)RLS(1)S(0.953)PRGGS(0.777)S(0.372)S(0.898)RR 72.489 0.025842 0 614.58 888.46 421.79 0 0 0 0 524.55 0 1144.3 TRUE FALSE 661.6327173 844.3403683 435.8522681 0 0 0 0 593.110486 0 1106.961585 0.597701606 0.762754896 0.393737483 0 0 0 0 0.535800424 0 1 10.11238944 -10.99224187 8.322005503 1.00002871 0.251831648 0.385145926 0.282584504 0.000166512 1.06E-05 0.302667028 0.073404742 1.02E-11 10.99224187 -0.748197062 T(ph)RLSTASEETVQNR ddPTM_A459_MK2206_30min_R2 2 TRLSTASEETVQNR 14 1 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 T(0.494)RLS(0.463)T(0.043)ASEETVQNR;T(0.998)RLS(0.002)TASEETVQNR 146.84 0.005078 29525000 179810 218000 198906 209340 173813 180804 192130 129422 149206 166841 TRUE FALSE 193576.3919 207174.437 205537.4268 192236.2524 166988.2283 187684.6229 166903.1002 146337.8998 162183.6682 161396.9918 1.19938042 1.28363258 1.273489824 1.191077047 1.034642755 1.162875595 1.03411531 0.906695336 1.00487417 1 17.30025416 -6.612624379 0.764004309 0.967271438 1.267588204 0.774105221 0.05823892 0.311562 0.404227148 0.039748932 0.045687732 2.44E-07 6.612624379 0.300316766 T(ph)RSEGGGTGESSQGGTSK ddPTM_A459_MK2206_30min_R2 1 TRSEGGGTGESSQGGTSK 18 1 F5H0R1;Q9H6E5 F5H0R1 TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase 1 T(0.978)RS(0.022)EGGGTGESSQGGTSK 104.3 0.002557 1183400 3816.8 4240.4 3626 3525.3 3597.3 3771.4 2221.9 2685.4 3307 3365.5 TRUE FALSE 4109.017143 4029.827902 3746.88903 3237.271713 3456.051927 3914.92327 1930.161861 3036.391 3594.636882 3255.684011 1.262105637 1.237782257 1.150876135 0.994344569 1.061544031 1.202488711 0.59285909 0.93264303 1.104111109 1 11.66874497 -5.592878336 0.686318933 0.936924714 1.33079574 0.354962323 0.149163857 1.504706808 1.067641608 0.08065145 0.397459054 2.55E-06 5.592878336 0.393871026 T(ph)RSEITFGQVK ddPTM_A459_MK2206_30min_R2 1 TRSEITFGQVK 11 1 F5H5A3;Q8IVH8-3;Q8IVH8-2;Q8IVH8;H7C1A4 F5H5A3 MAP4K3 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 3 1 T(0.735)RS(0.265)EITFGQVK 104.55 0.016896 9365200 38272 66199 65604 60595 73885 63008 55465 41763 50782 45474 TRUE FALSE 41202.13375 62911.65392 67791.20462 55644.19467 70983.90366 65405.81359 48182.37887 47221.56749 55198.92657 43990.1871 0.936621016 1.430129264 1.541052882 1.264922891 1.61363041 1.486827356 1.095298339 1.073456846 1.254800904 1 15.42489412 -7.271401484 24.10733085 1.112010389 1.394058496 0.3425098 0.18448646 505.3090632 1222791.94 0.07704813 0.052696726 5.35E-08 7.271401484 0.282048107 T(ph)RSEPLPPSATAPPPPGPMQPR ddPTM_A459_MK2206_30min_R1 1 TRSEPLPPSATAPPPPGPMQPR 22 1 J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;Q8WUI4-10 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 T(0.658)RS(0.341)EPLPPSATAPPPPGPMQPR 146.18 6.12E-07 11553000 798.03 591.06 760.96 580.55 609.38 349.01 551.33 655.1 870.3 630.24 TRUE FALSE 730.1533579 552.5818866 709.3081554 625.2640616 585.1071042 368.7706446 514.5517817 649.3725298 960.7707994 708.3188893 1.030825761 0.780131513 1.001396639 0.882743735 0.826050403 0.520627997 0.726440858 0.916779913 1.356409964 1 9.468255206 -8.072120288 6.074333107 1.172714104 0.819734871 0.442822579 0.156574797 0.21792361 14.21452971 0.111575306 0.041629913 8.47E-09 8.072120288 -0.352979232 T(ph)RSEPLPPSATAPPPPGPMQPR ddPTM_A459_MK2206_30min_R2 3 TRSEPLPPSATAPPPPGPMQPR 22 1 J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;Q8WUI4-10 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 T(0.5)RS(0.5)EPLPPSATAPPPPGPMQPR;T(0.499)RS(0.499)EPLPPS(0.001)ATAPPPPGPMQPR;T(0.472)RS(0.472)EPLPPS(0.046)AT(0.009)APPPPGPMQPR 120.11 4.55E-05 15608000 28242.5 26924.6 31292.8 42047.3 35801.6 30629.7 35998.4 24220.5 29579.6 28722.3 TRUE FALSE 30404.76751 25587.56352 32336.08633 38611.90109 34395.8493 31795.3347 31271.76684 27386.20251 32152.38014 27785.0937 1.094283425 0.920909744 1.163792596 1.389662439 1.237924538 1.144330663 1.125487183 0.985643698 1.157180914 1 14.76202349 -7.565244571 6.967933727 1.053151133 1.159936984 0.149951005 0.117804245 0.466472843 58.59878515 0.062425891 0.035993683 2.72E-08 7.565244571 0.106785851 T(ph)RSLPITIEMLK ddPTM_A459_MK2206_30min_R1 1 TRSLPITIEMLK 12 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 T(0.957)RS(0.036)LPIT(0.007)IEMLK 112.12 0.041563 0 1800.3 1483.2 1375.1 1857.2 1754.4 1622.1 1696.5 1979.2 1286.1 904.3 TRUE FALSE 1647.175031 1386.64341 1281.762043 2000.241866 1684.518533 1713.9419 1583.32958 1961.896063 1419.794697 1016.331511 1.620706446 1.364361328 1.261165308 1.968099822 1.657449872 1.686400433 1.557886933 1.930370201 1.396979905 1 9.989155348 -8.533477488 22.93208697 0.999999985 1.623813605 0.472873346 0.205120381 451.8054284 977555.1885 0.205096346 0.052955649 2.93E-09 8.533477488 0.62381362 T(ph)RSPDVISSASTALSQDIPEIASEALSR ddPTM_A459_MK2206_30min_R1 1 TRSPDVISSASTALSQDIPEIASEALSR 28 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 T(0.443)RS(0.443)PDVIS(0.043)S(0.043)AS(0.017)T(0.012)ALSQDIPEIASEALSR 88.838 2.88E-05 2472900 160.66 73.243 151.73 0 153.08 171.52 161.68 152.46 0 0 TRUE FALSE 146.9950233 68.47486739 141.4309903 0 146.9824994 181.2313142 150.8946222 151.1270583 0 0 0 T(ph)RSPDVISSASTALSQDIPEIASEALSR ddPTM_A459_MK2206_30min_R2 2 TRSPDVISSASTALSQDIPEIASEALSR 28 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 T(0.365)RS(0.258)PDVIS(0.108)S(0.108)AS(0.108)T(0.052)ALSQDIPEIASEALSR;T(0.454)RS(0.454)PDVIS(0.037)S(0.037)AS(0.014)T(0.005)ALSQDIPEIASEALSR 78.3 0.00011125 14043400 3422.94 4230.41 4300.1 4538.24 5001.16 4815.4 5402.65 4906.2 3411.85 4910.24 TRUE FALSE 3685.002918 4020.333991 4443.463188 4167.451275 4804.78933 4998.653421 4693.275565 5547.457186 3708.606546 4750.019271 0.775786941 0.84638267 0.935462139 0.877354604 1.011530492 1.052343819 0.988054005 1.167880985 0.780756105 1 12.21371765 -5.297034935 0.818575575 1.009598677 0.738638885 0.369052151 0.094147822 1.367224238 1.157216736 0.037085957 0.293759739 5.05E-06 5.297034935 -0.270959792 T(ph)RSYDNLTTACDNTVPLASR ddPTM_A459_MK2206_30min_R1 1 TRSYDNLTTACDNTVPLASR 20 1 Q13615-3;Q13615-2;Q13615;G5E953 Q13615-3 MTMR3 Myotubularin-related protein 3 1 T(0.649)RS(0.281)Y(0.07)DNLTTACDNTVPLASR 120.33 0.00034732 11421000 940.25 817.28 897.66 974.48 765.39 804.51 789.14 933.16 691.84 542.84 TRUE FALSE 860.2768001 764.0749235 836.7293402 1049.534618 734.9028956 850.060661 736.4979105 925.0014805 763.7592438 610.0911174 1.410079209 1.252394768 1.371482581 1.72029159 1.204578914 1.393333941 1.207193302 1.516169395 1.251877338 1 9.252880916 T(ph)RSYDNLTTACDNTVPLASR ddPTM_A459_MK2206_30min_R2 4 TRSYDNLTTACDNTVPLASR 20 1 Q13615-3;Q13615-2;Q13615;G5E953 Q13615-3 MTMR3 Myotubularin-related protein 3 1 T(0.408)RS(0.408)Y(0.185)DNLTTACDNTVPLASR;T(0.36)RS(0.36)Y(0.28)DNLTTACDNTVPLASR;T(0.432)RS(0.432)Y(0.111)DNLT(0.023)T(0.002)ACDNTVPLASR;T(0.447)RS(0.447)Y(0.106)DNLTTACDNTVPLASR 102.24 0.00090343 52850800 37703.8 65384 51559.9 67588.4 59447.7 65913.9 66625.7 51710.4 57077.9 51491.2 TRUE FALSE 40590.43192 62137.12564 53278.88133 62066.21152 57113.4846 68422.29965 57877.66556 58469.12683 62042.43257 49811.04636 0.81488816 1.247456743 1.069619798 1.24603308 1.146602787 1.373637068 1.161944384 1.173818482 1.245555697 1 15.6041781 -4.75636567 25 1.192676876 0.814887577 0.558332296 0.098529631 110.8365214 546070.1538 0.022945998 0.18736399 1.75E-05 4.75636567 -0.377789299 T(ph)RT(ph)T(ph)RRR ddPTM_A459_MK2206_30min_R2 1 TRTTRRR 7 3 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 T(1)RT(1)T(1)RRR 63.184 0.040946 8439000 0 7736.2 2091.2 2287.3 1746.8 1489.2 2134.2 1797.5 1416.9 1281.9 TRUE FALSE 0 7352.031557 2160.919564 2100.420273 1678.211855 1545.87255 1853.976976 2032.439422 1540.139401 1240.071708 0 5.928714856 1.742576296 1.693789367 1.353318396 1.246599321 1.495056265 1.63896927 1.241976082 1 10.27620783 -5.496100026 24.76742623 1.429977824 3.182179556 0.173428863 1.343389816 872.1846143 806675.0677 0.320533422 0.663921118 3.19E-06 5.496100026 1.752201732 T(ph)RTLPGTPGTTPPAASSSR ddPTM_A459_MK2206_30min_R2 1 TRTLPGTPGTTPPAASSSR 19 1 G5E9A7;Q09019 G5E9A7 DMWD Dystrophia myotonica WD repeat-containing protein 1 T(0.855)RT(0.145)LPGTPGTTPPAASSSR 72.676 0.017149 8233800 13383 26615 17702 16790 20727 14512 20075 12708 15150 17864 TRUE FALSE 14407.61277 25293.3378 18292.17584 15418.20329 19913.15384 15064.26433 17439.12839 14368.97923 16467.71962 17281.09914 0.833720856 1.463641727 1.058507662 0.892200384 1.152308292 0.871719108 1.009144629 0.831485261 0.952932419 1 14.07690736 -5.519782053 24.80663451 0.959412883 1.176779632 0.175995037 0.164293511 144.7754259 1159749.633 0.041429909 0.07361446 3.02E-06 5.519782053 0.217366748 T(ph)RTPASINATPANINLADLTR ddPTM_A459_MK2206_30min_R1 2 TRTPASINATPANINLADLTR 21 1 Q7KZ85;Q7KZ85-2 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 T(0.498)RT(0.498)PAS(0.005)INATPANINLADLTR;T(0.611)RT(0.386)PAS(0.003)INATPANINLADLTR 92.932 0.00076605 50087000 3279 3178.5 3128.7 2736.2 3492.7 3025.2 3453.4 3424.8 3304.9 3209.1 TRUE FALSE 3000.103831 2971.579072 2916.332561 2946.942598 3353.578363 3196.48421 3223.029987 3394.857335 3648.456182 3606.667535 0.831821564 0.823912668 0.808594785 0.817081854 0.929827418 0.886270824 0.89363102 0.941272602 1.011586498 1 11.81645073 -7.285067119 0.520049006 1.011654803 0.809523029 0.840513923 0.028415598 0.366969137 0.212294059 0.028934809 0.02464821 5.19E-08 7.285067119 -0.202131774 T(ph)RTPASINATPANINLADLTR ddPTM_A459_MK2206_30min_R2 1 TRTPASINATPANINLADLTR 21 1 Q7KZ85;Q7KZ85-2 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 T(0.486)RT(0.486)PAS(0.028)INATPANINLADLTR 89.663 0.0010976 8586100 29138 31701 24036 32985 23307 28301 36969 27279 25238 35945 TRUE FALSE 31368.82768 30126.77444 24837.34824 30290.01999 22391.85007 29378.01439 32114.92589 30844.45896 27433.15562 34772.11759 0.902125894 0.86640609 0.714289205 0.871100815 0.64395992 0.844872743 0.92358269 0.887045745 0.788941184 1 15.08564331 -6.99871071 24.99993588 0.889586445 0.796713735 0.225724286 0.08666749 70.97238192 1376149.534 0.03045729 0.026655211 1.00E-07 6.99871071 -0.09287271 T(ph)S(ph)ALPGET(ph)QRRL ddPTM_A459_MK2206_30min_R1 2 TSALPGETQRRL 12 2 J3QLL8;Q8N584-3 J3QLL8 TTC39C 3 T(1)S(1)ALPGET(1)QRRL;T(1)S(1)ALPGET(1)QRRL 97.163 0.021774 41625000 413.06 511.97 224.88 349.22 510.05 435.62 578.26 496.99 355.61 292.77 TRUE FALSE 377.9270779 478.6406599 209.6157722 376.1169849 489.7336285 460.2844279 539.6853305 492.6448688 392.5769321 329.0405579 1.148572931 1.454655508 0.637051473 1.143071806 1.488368582 1.398868367 1.640178749 1.497216246 1.193095874 1 8.362121613 -6.177656338 5.804629838 1.408910893 1.083946593 0.215998429 0.249870081 0.317520098 17.319688 0.074107317 0.096150194 6.64E-07 6.177656338 -0.3249643 T(ph)S(ph)EMHTMSGAQT(ph)GRK ddPTM_A459_MK2206_30min_R1 1 TSEMHTMSGAQTGRK 15 1 P26232-6 P26232-6 CTNNA2 Catenin alpha-2 3 T(0.988)S(0.963)EMHT(0.052)MS(0.258)GAQT(0.739)GRK 46.926 0.047904 0 185.71 257.86 136.93 0 0 243.26 250.73 218.51 184.6 234.96 TRUE FALSE 169.9143893 241.0732671 127.6355731 0 0 257.033171 234.0042592 216.5995901 203.7898306 264.0686187 0.643447867 0.91291903 0.48334245 0 0 0.973357502 0.886149442 0.820239797 0.771730589 1 8.044769055 -6.791581591 24.99995595 0.878801525 0.417521331 0.457637928 0.262301428 232.670294 192975.182 0.1065249 0.093957693 1.62E-07 6.791581591 -0.461280194 T(ph)S(ph)LVAS(ph)VMYT(ph)MVTPMLNPFIYSLRNTDMK ddPTM_A459_MK2206_30min_R2 2 TSLVASVMYTMVTPMLNPFIYSLRNTDMK 29 1 O76099 O76099 OR7C1 Olfactory receptor 7C1 4 T(0.802)S(0.802)LVAS(0.7)VMY(0.674)T(0.701)MVT(0.311)PMLNPFIY(0.004)S(0.004)LRNT(0.003)DMK;T(0.903)S(0.904)LVAS(0.656)VMY(0.636)T(0.658)MVT(0.212)PMLNPFIY(0.012)S(0.01)LRNT(0.009)DMK 45.579 0.01917 76879000 23455 24927 21150.1 16709.4 22887 19616.3 27231 18236.7 19536.1 22652 TRUE FALSE 25250.73283 23689.16143 21855.23378 15344.18857 21988.34138 20362.81204 23655.53699 20620.29931 21235.31466 21912.8671 1.152324464 1.081061703 0.997369887 0.700236464 1.003444291 0.929262791 1.079527242 0.941013297 0.9690797 1 14.41949064 -5.2334763 3.235975489 0.945351002 1.130986356 0.342298847 0.093620107 0.281120744 6.010220974 0.025567985 0.076595951 5.84E-06 5.2334763 0.185635353 T(ph)S(ph)S(ph)TIKS(ph)T(ph)PSGKR ddPTM_A459_MK2206_30min_R1 1 TSSTIKSTPSGKR 13 2 P33241-2;P33241;P33241-3 P33241-2 LSP1 Lymphocyte-specific protein 1 5 T(0.995)S(0.971)S(0.881)T(0.148)IKS(0.917)T(0.917)PS(0.172)GKR 78.529 0.026412 0 1325.1 1491.2 1373 1059.9 864.71 1274.8 1199.9 1280.5 737.07 1980.4 TRUE FALSE 1212.393287 1394.122609 1279.804585 1141.533682 830.2667696 1346.978074 1119.85686 1269.304724 813.6910641 2225.746903 0.544713006 0.626361698 0.575000052 0.51287668 0.373028384 0.605180253 0.503137557 0.570282597 0.365581128 1 11.12007383 -11.1835693 3.02304586 1.044893232 0.523363273 0.746114918 0.084048271 117463505 119749545.7 40928024.84 0.021662866 6.55E-12 11.1835693 -0.521529959 T(ph)S(ph)Y(ph)S(ph)PVT(ph)HK ddPTM_A459_MK2206_30min_R2 1 TSYSPVTHK 9 0 B5MC85;A0A0A0MSD2;Q96LZ7-2;A0A0C4DFM4 B5MC85 RMDN2 5 T(1)S(1)Y(1)S(1)PVT(1)HK 49.28 0.044453 10652000 9354.6 9987.5 9318.7 10234 7887.9 9240.2 10583 7555.8 8741 8561.2 TRUE FALSE 10070.79537 9491.535273 9629.380807 9397.849463 7578.181412 9591.842286 9193.439388 8543.369003 9501.27638 8281.848745 1.216008126 1.146064794 1.162709089 1.134752608 0.915034993 1.158176463 1.110070912 1.031577522 1.147240993 1 13.01573714 -6.012979067 24.50636566 1.065268872 1.168156077 0.360674364 0.069376751 564.2632191 1065415.188 0.019797826 0.02686471 9.71E-07 6.012979067 0.102887206 T(ph)SAPATPEIQGR ddPTM_A459_MK2206_30min_R1 1 TSAPATPEIQGR 12 0 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 T(0.843)S(0.157)APATPEIQGR 131.79 0.0046186 22355000 2976.6 2954.2 3176.3 2593.6 4125 3671.5 3317.7 3134.7 2595.5 2454.1 TRUE FALSE 2723.424539 2761.881043 2960.701606 2793.359521 3960.692515 3879.377157 3096.382286 3107.293648 2865.311513 2758.132436 0.98741616 1.001359111 1.073444323 1.012772079 1.436005198 1.406523163 1.122637277 1.126593346 1.038859293 1 11.42947602 T(ph)SAPATPEIQGR ddPTM_A459_MK2206_30min_R2 4 TSAPATPEIQGR 12 0 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 T(0.899)S(0.101)APATPEIQGR;T(0.982)S(0.018)APATPEIQGR;T(0.907)S(0.093)APATPEIQGR;T(0.856)S(0.144)APATPEIQGR 156.52 0.0010198 64394900 181362 244520 235552 264436 247603 230729 244328 183794 213531 216412 TRUE FALSE 195247.2142 232377.4924 243405.1861 242830.7329 237880.8621 239509.5538 212247.4401 207816.5069 232103.5404 209350.4942 0.932633166 1.109992567 1.162668314 1.159924336 1.136280395 1.144060131 1.013837779 0.992672636 1.108683986 1 17.6755608 -7.267964661 24.85920051 1.028187982 1.113888288 0.23578122 0.06893518 717.5766804 2733721.868 0.029246432 0.020226701 5.40E-08 7.267964661 0.085700306 T(ph)SDANETEDHLESLICK ddPTM_A459_MK2206_30min_R1 1 TSDANETEDHLESLICK 17 0 F2Z2T1;Q09161 F2Z2T1 NCBP1 Nuclear cap-binding protein subunit 1 1 T(0.723)S(0.277)DANETEDHLESLICK 161.31 2.76E-05 0 3502.5 3241.3 3488.7 2832.2 2093.8 1648.2 1670.1 1830.2 2011 2150.9 TRUE FALSE 3204.593983 3030.290781 3251.896764 3050.336535 2010.399512 1741.51966 1558.690676 1814.198754 2220.050646 2417.36973 1.325653226 1.25354874 1.345221098 1.261841123 0.831647508 0.720419238 0.644787869 0.7504846 0.918374471 1 11.23922243 -6.266558317 4.03500243 0.780520713 1.303470504 0.855927977 0.097469204 0.073867903 2.873463174 0.030469087 0.037242063 5.41E-07 6.266558317 0.522949791 T(ph)SDFNTFLAQEGCTK ddPTM_A459_MK2206_30min_R1 2 TSDFNTFLAQEGCTK 15 0 Q9UHD1;E9PHZ2;Q9UHD1-2 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 T(0.979)S(0.021)DFNTFLAQEGCTK;T(0.999)S(0.001)DFNTFLAQEGCTK 263.15 2.80E-36 13432300 2804.22 2835.43 2854.39 2674.16 2646.13 2238.96 2664.76 2869.95 2165.65 2370.23 TRUE FALSE 2565.706363 2650.842992 2660.64196 2880.124267 2540.729039 2365.72798 2486.998723 2844.85833 2390.777067 2663.871987 0.963149272 0.995109001 0.998787469 1.081179682 0.953772948 0.888078704 0.933602941 1.067941081 0.897481966 1 11.37930904 T(ph)SDIFGSPVTATSR ddPTM_A459_MK2206_30min_R1 1 TSDIFGSPVTATSR 14 0 A6NGP5;Q9H910;Q9H910-3;H3BMV3;H3BTV5;Q9H910-2;H3BU16;H3BMT0 A6NGP5;Q9H910-2 HN1L Hematological and neurological expressed 1-like protein 1 T(0.568)S(0.062)DIFGS(0.368)PVT(0.002)ATSR 152 0.00091422 350870000 3355.7 3236.8 2887.8 2712.6 2858.6 2793.3 3772.2 3588.2 3210.2 3367.7 TRUE FALSE 3070.280094 3026.083732 2691.784182 2921.524922 2744.735909 2951.454232 3520.563421 3556.828746 3543.911778 3784.916101 0.811188415 0.799511443 0.711187279 0.77188631 0.725177477 0.779793833 0.930156264 0.939737804 0.936325055 1 11.88604561 -7.269672235 3.664866692 0.950578415 0.762039814 0.88613771 0.032621846 0.076670637 2.282052154 0.014438609 0.009992487 5.37E-08 7.269672235 -0.188538601 T(ph)SDPNPAAPDSESVIVAMER ddPTM_A459_MK2206_30min_R1 1 TSDPNPAAPDSESVIVAMER 20 0 P42858 P42858 HTT Huntingtin 1 T(0.786)S(0.214)DPNPAAPDSESVIVAMER 89.604 0.010502 0 387.55 361.32 418.99 214.75 364.04 300.27 314.96 365.74 419.13 325.97 TRUE FALSE 354.5868374 337.7980023 390.5501262 231.2900822 349.5395159 317.2710279 293.9495931 362.5423737 462.7000634 366.3536245 0.967881341 0.922054484 1.066046847 0.631330132 0.954104157 0.866023991 0.802365729 0.989596798 1.262987541 1 8.517093079 -8.018693692 7.514781315 1.130954568 0.887675295 0.384682883 0.123249173 0.177919778 49.89811659 0.075540467 0.03092246 9.58E-09 8.018693692 -0.243279273 T(ph)SDSDQQAYLVQR ddPTM_A459_MK2206_30min_R1 2 TSDSDQQAYLVQR 13 0 Q96CV9-3;Q96CV9-2;Q96CV9 Q96CV9-3 OPTN Optineurin 1 T(0.5)S(0.5)DSDQQAYLVQR;T(0.925)S(0.075)DSDQQAYLVQR 260.73 2.29E-29 41481000 7173.3 7785 7482.5 6332.4 6826.2 5379.7 5953.5 6017.4 5438.3 5350.6 TRUE FALSE 6563.173167 7278.195085 6974.608747 6820.122545 6554.297999 5684.293965 5556.352878 5964.790506 6003.630746 6013.472723 1.09141148 1.210314808 1.159830446 1.134140431 1.0899356 0.94525979 0.923984049 0.991904475 0.998363346 1 12.55398266 -6.580570731 3.044106485 0.968358838 1.152661593 0.844228978 0.036030721 0.095390301 1.800961342 0.012999124 0.013351165 2.63E-07 6.580570731 0.184302755 T(ph)SDSDQQAYLVQR ddPTM_A459_MK2206_30min_R2 1 TSDSDQQAYLVQR 13 0 Q96CV9-3;Q96CV9-2;Q96CV9 Q96CV9-3 OPTN Optineurin 1 T(0.992)S(0.008)DS(0.001)DQQAYLVQR 235.71 7.80E-14 35027000 87603 117380 100140 116070 95678 82127 79897 51520 70089 74548 TRUE FALSE 94309.95304 111551.0799 103478.6176 106586.7097 91921.20098 85252.40053 69406.42793 58253.84089 76185.21453 72115.50487 1.307762501 1.546839062 1.434901105 1.47799991 1.274638528 1.18216465 0.962434196 0.807785247 1.056433213 1 16.13802185 -6.865525707 1.532861909 0.93551607 1.447896392 0.860315612 0.086921198 0.125638822 0.609877446 0.039368403 0.032773522 1.36E-07 6.865525707 0.512380322 T(ph)SDSTPDPQR ddPTM_A459_MK2206_30min_R2 1 TSDSTPDPQR 10 0 P52948-6;P52948-2;P52948-5;P52948;H7C3P6 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 T(0.596)S(0.13)DS(0.137)T(0.137)PDPQR 121.09 0.011423 7923800 23539 19544 19202 23086 18754 20662 24924 17912 20226 21519 TRUE FALSE 25341.16394 18573.47338 19842.1851 21199.79995 18017.62373 21448.30689 21651.44886 20253.1599 21985.22092 20816.83679 1.2173398 0.892233223 0.953179645 1.018396799 0.865531296 1.030334585 1.040093126 0.972922068 1.056126881 1 14.34546324 T(ph)SDTETEPSK ddPTM_A459_MK2206_30min_R1 1 TSDTETEPSK 10 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.858)S(0.142)DTETEPSK 136.81 0.0042453 5566500 3390.8 4157.1 2803.3 2017.9 1925.4 2023.4 2389.5 2810.8 1004.1 3091.8 TRUE FALSE 3102.394654 3886.472034 2613.019806 2173.319008 1848.707241 2137.963159 2230.100815 2786.225472 1108.479788 3474.835526 0.892817698 1.118462156 0.751983738 0.625445145 0.532027265 0.615270318 0.641786006 0.801829454 0.319002088 1 11.76272898 -5.450184257 4.145941145 0.635477884 1.002467819 0.39777863 0.17282013 0.195436993 6.341111414 0.043229566 0.093124284 3.55E-06 5.450184257 0.366989934 T(ph)SDVGGYYYEK ddPTM_A459_MK2206_30min_R1 2 TSDVGGYYYEK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.993)S(0.007)DVGGYYYEK;T(0.991)S(0.009)DVGGYYYEK 262.11 9.83E-22 125053000 10435.6 11427.9 10112.5 7903.8 7797.2 7417.5 9552.6 8274 9188.6 9220 TRUE FALSE 9547.99742 10683.94163 9426.091675 8512.552045 7486.621013 7837.47244 8915.363484 8201.66129 10143.78785 10362.24321 0.921421861 1.031045249 0.909657444 0.821497033 0.722490378 0.756349015 0.860370028 0.791494769 0.97891814 1 13.33904873 -5.565008056 3.943885574 0.830720512 0.97633522 0.244160129 0.08751537 0.246547654 8.163764066 0.023886786 0.045592848 2.72E-06 5.565008056 0.145614708 T(ph)SDVGGYYYEK ddPTM_A459_MK2206_30min_R2 3 TSDVGGYYYEK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.63)S(0.37)DVGGYYYEK;T(0.993)S(0.007)DVGGYYYEK;T(0.999)S(0.001)DVGGYYYEK 188.09 4.54E-05 118031000 588065 547969 485378 516398 526048 401677 642725 466350 388806 573449 TRUE FALSE 633087.7085 520757.6563 501560.2603 474206.6315 505392.7123 416963.0997 558334.4354 527303.5462 422623.6431 554737.4061 1.141238542 0.938746244 0.904139967 0.85483082 0.911048555 0.751640497 1.006484202 0.950546223 0.761844502 1 19.08144548 -4.679531661 2.189115654 0.889047471 1.257038213 0.45199407 0.081767694 0.841007338 3.653279303 0.020931143 0.671764956 2.09E-05 4.679531661 0.367990742 T(ph)SFSFQK ddPTM_A459_MK2206_30min_R2 1 TSFSFQK 7 0 H0Y7F8;Q9BPZ7-4;Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7 H0Y7F8 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 T(0.999)S(0.001)FSFQK 113.71 0.032793 9718800 121080 135930 126910 128810 109970 95569 132940 109050 92665 138820 TRUE FALSE 130349.9779 129179.9139 131141.1161 118285.811 105652.0252 99205.94526 115484.8183 123303.2094 100724.8342 134290.3148 0.970658071 0.961945127 0.976549324 0.880821608 0.786743448 0.738742369 0.859963866 0.918183933 0.750052857 1 17.03499573 -5.89848593 3.83005296 0.833747544 0.968876661 0.370884758 0.073496293 0.226344963 6.290243065 0.020938803 0.032316437 1.26E-06 5.89848593 0.135129117 T(ph)SGETTQTHTEPTGDSK ddPTM_A459_MK2206_30min_R1 2 TSGETTQTHTEPTGDSK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.481)S(0.481)GET(0.019)T(0.019)QTHTEPTGDSK;T(0.496)S(0.496)GET(0.004)T(0.004)QTHTEPTGDSK 123.83 0.0018094 10544100 6009 5516.6 5102.2 4326.5 4184.5 4594.8 4230.5 4274.5 5379.4 4411.1 TRUE FALSE 5497.902995 5157.468337 4755.87688 4659.72778 4017.822504 4854.953605 3948.291064 4237.128497 5938.60788 4957.58037 1.108989181 1.040319662 0.959314126 0.939919766 0.810440216 0.979299021 0.796414938 0.854676713 1.197884338 1 12.27542045 -5.11842949 1.735073168 0.924479767 1.119231748 0.19733607 0.108651246 0.75724293 3.543216906 0.030684121 0.196311076 7.61E-06 5.11842949 0.194751981 T(ph)SGETTQTHTEPTGDSK ddPTM_A459_MK2206_30min_R2 1 TSGETTQTHTEPTGDSK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.774)S(0.198)GET(0.014)T(0.014)QTHTEPTGDSK 94.911 0.0089558 6078300 36351 35737 24856 35021 29269 24614 45850 37243 20814 31279 TRUE FALSE 39134.06051 33962.35255 25684.68663 32159.67227 28119.752 25550.70302 39829.83992 42110.78797 22624.3641 30258.36879 1.293330145 1.122411878 0.848845713 1.062835624 0.929321478 0.844417728 1.316324756 1.391707143 0.747706007 1 14.88504659 -10.29589873 15.27819129 0.999982437 1.064310757 0.007655737 0.209705996 0 0 0.206793437 0.050154775 5.06E-11 10.29589873 0.064328319 T(ph)SGPLSPPTGPPGPAPAGPAVR ddPTM_A459_MK2206_30min_R2 1 TSGPLSPPTGPPGPAPAGPAVR 22 0 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;A0A2R8YHA2 P49815 TSC2 Tuberin 1 T(0.727)S(0.157)GPLS(0.116)PPTGPPGPAPAGPAVR 122.19 7.61E-05 4515300 20047 18966 17856 17916 19136 17325 20423 14446 16159 23619 TRUE FALSE 21581.81373 18024.17602 18451.31013 16452.20549 18384.62449 17984.31502 17741.43557 16334.1418 17564.48061 22848.31396 0.944569204 0.78886241 0.807556748 0.720062124 0.804638124 0.787117817 0.776487735 0.714894842 0.768742965 1 14.47980009 -4.760621713 6.267622369 0.784548546 0.949759033 0.245781514 0.07528895 0.156589853 26.29567014 0.017138757 0.110631839 1.74E-05 4.760621713 0.165210487 T(ph)SGSGFHR ddPTM_A459_MK2206_30min_R2 1 TSGSGFHR 8 0 Q15007 Q15007 WTAP Pre-mRNA-splicing regulator WTAP 1 T(0.875)S(0.124)GS(0.001)GFHR 97.565 0.027339 2926600 10361 9640 9708.9 8695.3 10834 10069 10155 13186 12023 12132 TRUE FALSE 11154.24613 9161.291618 10032.58988 7984.866175 10408.60272 10452.18285 8821.636302 14909.45547 13068.73881 11736.13383 0.950419132 0.780605585 0.85484624 0.680365978 0.886885142 0.890598471 0.751664596 1.270389013 1.113547186 1 13.51866961 -7.75570988 24.99979998 1.143976092 0.826132937 0.675097236 0.095194444 70.50188592 307628.2914 0.044304146 0.024675426 1.76E-08 7.75570988 -0.317843155 T(ph)SLADSSIFDSK ddPTM_A459_MK2206_30min_R1 2 TSLADSSIFDSK 12 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;C9J0L6;C9JDV9;C9JTI2;C9J1C4;C9JDB4 Q9H8V3-2 ECT2 Protein ECT2 1 T(0.872)S(0.128)LADSSIFDSK;T(0.865)S(0.135)LADSSIFDSK 183.06 0.00024385 10249400 4605.4 5712.1 5197 4012.1 3946.7 3962.3 5066.2 4064.1 4375.4 5405.9 TRUE FALSE 4213.686546 5340.241252 4844.24212 4321.112637 3789.494582 4186.642002 4728.243042 4028.568002 4830.238488 6075.623704 0.69353975 0.878961817 0.797324251 0.711221242 0.623721081 0.68908843 0.778231713 0.66307069 0.795019363 1 12.5688168 -8.548819203 19.8974277 1.000000002 0.73256608 0.578194913 0.06946689 315.2522378 241812.6418 0.072185113 0.018638116 2.83E-09 8.548819203 -0.267433922 T(ph)SMGGTQQQFVEGVR ddPTM_A459_MK2206_30min_R1 1 TSMGGTQQQFVEGVR 15 0 A0A2R8Y6G0;A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222 A0A2R8Y6G0 CTNNB1 Catenin beta-1 1 T(0.883)S(0.112)MGGT(0.006)QQQFVEGVR 92.269 0.031987 13066000 1682 1432.7 1289.1 1292.5 1478.9 2143.4 1986.5 1801.8 2852.8 2894.3 TRUE FALSE 1538.937067 1339.43097 1201.599484 1392.048574 1419.992281 2264.757456 1853.98421 1786.047053 3149.358769 3252.867735 0.473101642 0.411769269 0.36939697 0.427945028 0.436535512 0.696234105 0.569953764 0.549068452 0.968179165 1 11.66749645 -8.059996538 0.598196469 1.026145921 0.411235877 0.811956567 0.093849922 0.316005918 0.256939721 0.094120101 0.047567392 8.71E-09 8.059996538 -0.614910044 down T(ph)SPADHGGSVGSESGGSAVDSVAGEHSVSGR ddPTM_A459_MK2206_30min_R1 1 TSPADHGGSVGSESGGSAVDSVAGEHSVSGR 31 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.495)S(0.495)PADHGGS(0.009)VGS(0.001)ESGGSAVDSVAGEHSVSGR 109.69 3.80E-11 5634900 420.4 390.36 409.57 377.86 533.54 484.12 646.86 529.53 371.98 380.98 TRUE FALSE 384.6427724 364.947493 381.7695295 406.9628427 512.287972 511.530456 603.7091497 524.900375 410.6486521 428.1786787 0.89832304 0.852325235 0.891612657 0.950450975 1.196435034 1.194665876 1.409946781 1.225890968 0.959059086 1 8.742069148 -6.168898804 3.182352386 1.191078322 0.881396386 0.544019501 0.118911401 0.189496741 3.690818353 0.038075586 0.050432374 6.78E-07 6.168898804 -0.309681937 T(ph)SPADHGGSVGSESGGSAVDSVAGEHSVSGR ddPTM_A459_MK2206_30min_R2 5 TSPADHGGSVGSESGGSAVDSVAGEHSVSGR 31 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.497)S(0.497)PADHGGS(0.005)VGSESGGSAVDSVAGEHSVSGR;T(0.5)S(0.5)PADHGGSVGSESGGSAVDSVAGEHSVSGR;T(0.5)S(0.5)PADHGGS(0.001)VGSESGGSAVDSVAGEHSVSGR;T(0.5)S(0.5)PADHGGSVGSESGGSAVDSVAGEHSVSGR;T(0.499)S(0.499)PADHGGS(0.002)VGSESGGSAVDSVAGEHSVSGR 198.32 1.48E-48 53099800 166107.6 136233.2 163792.7 187785.8 153599.2 125460.3 186199.2 145186.3 113232.2 209890.6 TRUE FALSE 178824.9256 129468.0574 169253.4669 172443.0994 147568.1236 130234.7796 161751.0214 164162.6479 123080.9321 203041.8869 0.880729234 0.637642111 0.833588918 0.849298153 0.726786605 0.641418289 0.796638683 0.808516166 0.60618493 1 17.63141786 -10.72211108 5.117433691 1.000019636 0.75400877 0.391431813 0.092233539 2.00E-05 3.13E-06 0.08656197 0.020992687 1.90E-11 10.72211108 -0.246010865 T(ph)SPASLDFPESQK ddPTM_A459_MK2206_30min_R2 1 TSPASLDFPESQK 13 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 T(0.581)S(0.418)PASLDFPESQK 90.689 0.045662 0 20260 23698 23016 20945 23452 18538 27767 20505 20032 20539 TRUE FALSE 21811.12118 22521.19178 23783.34195 19233.7265 22531.15664 19243.47658 24121.15955 23185.0739 21774.34715 19868.81411 1.097756567 1.133494513 1.197018696 0.968035958 1.133996046 0.968526681 1.214021099 1.166907787 1.095905726 1 14.27821815 -12.0660312 1.771378465 0.000192778 1.109087991 0.143203326 0.079534464 1846902.001 119618.2911 7383810.892 0.019978605 8.59E-13 12.0660312 1.108895214 T(ph)SPCQSPTISEGPVPSLPIRPSR ddPTM_A459_MK2206_30min_R2 1 TSPCQSPTISEGPVPSLPIRPSR 23 1 J3KQV8;O43426;A0A0D9SGJ6;C9JFZ1;O43426-2;J3KPK1;O43426-4 J3KQV8 SYNJ1 Synaptojanin-1 1 T(0.756)S(0.243)PCQSPTISEGPVPSLPIRPSR 83.411 0.00049738 5434000 11036 9666.2 8492.2 8623.4 7366.5 7116.1 7953.5 5928 5968.4 9594.6 TRUE FALSE 11880.92465 9186.190564 8775.325709 7918.840635 7077.254196 7386.908172 6909.195896 6702.809954 6487.520644 9281.528988 1.280061147 0.989728155 0.945461219 0.853182773 0.762509518 0.795871907 0.744402771 0.72216657 0.698971113 1 13.18014677 -3.386158327 0.628680715 0.766764688 3.86826733 0.760922041 0.083041756 7.306459652 0.554739548 0.0344827 24.18618805 0.000411 3.386158327 3.101502642 T(ph)SPDPSPVSAAPSK ddPTM_A459_MK2206_30min_R2 1 TSPDPSPVSAAPSK 14 0 Q13469-5;Q13469-3;Q13469-4;Q13469-2;Q13469 Q13469-5 NFATC2 "Nuclear factor of activated T-cells, cytoplasmic 2" 1 T(0.5)S(0.5)PDPSPVSAAPSK 102.9 0.016983 4248100 68581 84364 73324 80753 74509 73231 80268 73150 63980 68636 TRUE FALSE 73831.61409 80174.60644 75768.58556 74155.22158 71583.40228 76017.85702 69728.71518 82710.95616 69544.86475 66396.41294 1.11198197 1.207514124 1.141154804 1.116855841 1.07812153 1.144909095 1.050187986 1.245714226 1.047419005 1 16.01881768 -14.52287874 0.209572706 0.378780074 1.148261779 0.315864253 0.058827889 177.4835702 1.76388247 46.3150335 0.121654525 3.00E-15 14.52287874 0.769481704 T(ph)SPDSLR ddPTM_A459_MK2206_30min_R1 1 TSPDSLR 7 0 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 1 T(0.685)S(0.315)PDSLR 127.46 0.012484 8644500 6690.5 6529.2 6377.8 4792.8 5701 5362.7 6539.7 4892.9 6033.8 6904.9 TRUE FALSE 6121.437842 6104.147893 5944.892706 5161.942286 5473.917098 5666.33144 6103.448545 4850.121891 6661.035102 7760.331141 0.788811422 0.786583431 0.766061731 0.665170364 0.705371588 0.730166192 0.786493312 0.624989038 0.858344184 1 12.9219025 -8.530981478 6.712759425 0.99997434 0.733613903 0.728227868 0.05197193 0.061681379 21.75292307 0.050762498 0.013139037 2.94E-09 8.530981478 -0.266360437 T(ph)SPDSLRR ddPTM_A459_MK2206_30min_R2 1 TSPDSLRR 8 1 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 1 T(0.986)S(0.014)PDSLRR 83.647 0.04792 5628500 18001 24062 16560 19631 25547 22048 22176 17020 17776 23239 TRUE FALSE 19379.1704 22867.11607 17112.10213 18027.0845 24543.89642 22887.05209 19264.26456 19244.57244 19322.12435 22480.71333 0.862035386 1.017188188 0.761190354 0.801891125 1.091775695 1.018074994 0.856924079 0.856048122 0.859497831 1 14.45640019 -4.462020011 15.26291093 0.913320903 0.426774072 0.024137557 0.102975341 748610.8369 4918686.779 0.026970419 11151758.98 3.45E-05 4.462020011 -0.486546831 T(ph)SPDTLR ddPTM_A459_MK2206_30min_R1 3 TSPDTLR 7 0 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.735)S(0.265)PDTLR;T(0.685)S(0.314)PDTLR;T(0.936)S(0.064)PDTLR 166.68 9.65E-05 860610000 22133.7 22322.5 21341 17570.7 17803.3 16902.6 21447.2 18175.4 19426.8 22537.3 TRUE FALSE 20251.11259 20869.30119 19892.43238 18923.99836 17094.15686 17859.61061 20016.49642 18016.49439 21446.28538 25329.39087 0.799510446 0.823916426 0.785349813 0.747116204 0.674874376 0.705094358 0.79024784 0.711288103 0.846695662 1 14.62852476 -8.578807718 3.84099753 0.999868573 0.755112056 0.741620249 0.044618275 0.147637713 6.266368139 0.047846429 0.012557887 2.64E-09 8.578807718 -0.244756517 T(ph)SPDTLR ddPTM_A459_MK2206_30min_R2 1 TSPDTLR 7 0 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.941)S(0.057)PDT(0.002)LR 136.27 0.0065848 818400000 220370 212110 194850 211210 178850 166300 245890 194340 148560 191510 TRUE FALSE 237241.6966 201576.9258 201346.2017 193953.4674 171827.4504 172628.663 213604.3476 219740.9053 161481.4803 185261.0444 1.280580585 1.088069683 1.086824283 1.046919864 0.927488296 0.931813073 1.152991166 1.186115009 0.871642934 1 17.49920003 -3.861185227 1.061569506 1.02585067 2.561436733 0.408510997 0.093525194 11.49205525 2.448364712 0.030499984 31.65842193 0.000137662 3.861185227 1.535586064 T(ph)SPDTLRR ddPTM_A459_MK2206_30min_R2 2 TSPDTLRR 8 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.993)S(0.007)PDTLRR;T(0.939)S(0.06)PDTLRR 102.06 0.020628 467300000 392220 570430 435520 529780 469980 462910 509360 420580 369550 396550 TRUE FALSE 422248.6648 542103.2757 450040.0194 486495.2793 451526.2237 480526.3644 442480.4201 475551.2501 401692.791 383610.606 1.100722082 1.413160291 1.173168866 1.268200805 1.177043118 1.252640977 1.153462426 1.239671799 1.047136822 1 18.54928308 -8.342284903 3.640306717 1.002236444 1.226316459 0.497493105 0.080204768 0.177911888 4.235143049 0.070468101 0.018995704 4.55E-09 8.342284903 0.224080015 T(ph)SPENVQDR ddPTM_A459_MK2206_30min_R1 2 TSPENVQDR 9 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 T(0.87)S(0.13)PENVQDR;T(0.877)S(0.123)PENVQDR 208.33 0.0048708 80898000 10156.9 11120.9 10598.8 8460.3 8724.7 8187.2 10761.9 9179.5 9904.7 11323.1 TRUE FALSE 9293.002319 10396.92739 9879.382986 9111.913772 8377.176724 8650.752189 10043.99329 9099.244599 10934.32901 12725.89111 0.73024374 0.816990126 0.776321509 0.716013809 0.658278202 0.679775751 0.789256579 0.715018266 0.859219124 1 13.63547906 -8.538613739 2.660691665 0.999715508 0.735828799 0.764624264 0.046395181 0.14110184 2.433177519 0.049201069 0.013268562 2.89E-09 8.538613739 -0.263886709 T(ph)SPENVQDR ddPTM_A459_MK2206_30min_R2 2 TSPENVQDR 9 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 T(0.73)S(0.27)PENVQDR;T(0.988)S(0.012)PENVQDR 179.94 0.0025993 147472000 200170 193825 167346 184112 162584 164855 197220 175859 141840 206169 TRUE FALSE 215495.1691 184199.9323 172925.2321 169069.4607 156200.1352 171128.6725 171324.7771 198844.3751 154176.9868 199441.7224 1.080491918 0.923577725 0.867046424 0.847713601 0.783186855 0.858038481 0.859021748 0.997004903 0.773042796 1 17.60560772 -4.752160416 2.310546532 0.867972671 1.143047533 0.431364942 0.071360973 0.601548491 3.607307774 0.018108915 0.350068572 1.77E-05 4.752160416 0.275074862 T(ph)SPHWK ddPTM_A459_MK2206_30min_R2 1 TSPHWK 6 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 T(0.5)S(0.5)PHWK 111.65 0.034142 5586000 93407 98977 88161 94670 91424 79606 101030 81946 77209 97028 TRUE FALSE 100558.3117 94061.94611 91100.24374 86935.15817 87834.23439 82635.46211 87764.63964 92656.62356 83924.49926 93861.98431 1.071342274 1.002130381 0.97057658 0.926202006 0.935780711 0.8803933 0.935039252 0.987158158 0.894126625 1 16.51825334 -4.893223818 1.277034571 0.933990421 1.112827649 0.591519121 0.034801045 0.774032305 1.274483836 0.010322274 0.173169808 1.28E-05 4.893223818 0.178837228 T(ph)SPKPAVVETVTTAK ddPTM_A459_MK2206_30min_R2 1 TSPKPAVVETVTTAK 15 1 P56192;H0YI94;H0YIP0 P56192 MARS "Methionine--tRNA ligase, cytoplasmic" 1 T(0.5)S(0.5)PKPAVVETVTTAK 108.97 0.0053454 6580400 61544 43432 51910 37858 37833 33738 56537 40114 31726 48137 TRUE FALSE 66255.85596 41275.23004 53640.65349 34764.8803 36347.48632 35021.92323 49113.62399 45357.03753 34485.47013 46566.29363 1.422828634 0.886375677 1.151920183 0.746567476 0.780553561 0.752087411 1.054703309 0.974031515 0.74056721 1 15.50699844 -2.398849949 1.212504923 0.881408537 199.9994162 0.551248838 0.139804087 436.1700005 2.279477673 0.041483843 239725.015 0.003991628 2.398849949 199.1180077 T(ph)SPKPAVVETVTTAKPQQIQALMDEVTK ddPTM_A459_MK2206_30min_R1 2 TSPKPAVVETVTTAKPQQIQALMDEVTK 28 2 P56192;H0YI94;H0YIP0 P56192 MARS "Methionine--tRNA ligase, cytoplasmic" 1 T(0.625)S(0.375)PKPAVVETVTTAKPQQIQALMDEVTK;T(0.5)S(0.5)PKPAVVETVTTAKPQQIQALMDEVTK 67.877 0.00031553 26633100 4122.95 4942.82 4596.1 4037.7 3162.05 2949.09 3322.21 3516.93 3960.64 3928.88 TRUE FALSE 3772.271452 4621.04152 4284.129537 4348.684354 3036.098853 3116.064927 3100.591433 3486.181852 4372.362701 4415.619316 0.854301782 1.04652172 0.970221668 0.98484132 0.687581659 0.705691479 0.702187216 0.789511414 0.990203726 1 12.10840008 -6.242296241 24.73953279 0.791145829 0.970314511 0.288371781 0.113431009 808.0802404 1044317.642 0.033712738 0.043453643 5.72E-07 6.242296241 0.179168682 T(ph)SPKPAVVETVTTAKPQQIQALMDEVTK ddPTM_A459_MK2206_30min_R2 1 TSPKPAVVETVTTAKPQQIQALMDEVTK 28 2 P56192;H0YI94;H0YIP0 P56192 MARS "Methionine--tRNA ligase, cytoplasmic" 1 T(0.698)S(0.301)PKPAVVETVTTAKPQQIQALMDEVTK 71.881 0.00042697 21089000 63264 69008 73422 62785 59579 51846 87086 55986 54171 77830 TRUE FALSE 68107.54048 65581.16307 75869.85283 57655.26466 57239.6291 53819.03586 75651.50359 63303.56243 58882.69566 75290.41347 0.904597775 0.871042674 1.007696058 0.765771657 0.760251225 0.714819236 1.004795964 0.840791802 0.782074277 1 16.20017856 -5.840192952 0.004366493 1.709651718 4.55E-07 0.019246274 0.104135356 240070.9847 243.0761444 46585.44845 48594.83282 1.44E-06 5.840192952 -1.709651263 T(ph)SPLNSSGSSQGR ddPTM_A459_MK2206_30min_R1 2 TSPLNSSGSSQGR 13 0 P51003;G3XAH6;H0YJL4 P51003 PAPOLA Poly(A) polymerase alpha 1 T(0.998)S(0.002)PLNSSGSSQGR;T(0.987)S(0.013)PLNSSGSSQGR 222.56 1.74E-08 59651000 6130.8 6118.9 6367.2 4235.3 4519.7 5066 7126.3 4840.3 8254.3 10619.1 TRUE FALSE 5609.343266 5720.558498 5935.012204 4561.50354 4339.670778 5352.832542 6650.91753 4797.981767 9112.364023 11934.67428 0.470003884 0.479322549 0.497291511 0.382205952 0.363618703 0.448510987 0.557276837 0.402020336 0.763520127 1 13.54287157 -8.472299266 2.92880177 0.998405368 0.450487591 0.910520887 0.056404297 0.065195025 1.223741565 0.057249737 0.015352341 3.37E-09 8.472299266 -0.547917777 down T(ph)SPLNSSGSSQGR ddPTM_A459_MK2206_30min_R2 5 TSPLNSSGSSQGR 13 0 P51003;G3XAH6;H0YJL4 P51003 PAPOLA Poly(A) polymerase alpha 1 T(0.985)S(0.015)PLNSSGSSQGR;T(0.973)S(0.027)PLNSSGSSQGR;T(0.997)S(0.003)PLNSSGSSQGR;T(0.993)S(0.007)PLNSSGSSQGR;T(0.977)S(0.022)PLNSSGSSQGR 145.61 0.0014557 140390800 214008 149954.1 156613 175279 130921 124631 191895 137952 120119 191087 TRUE FALSE 230392.617 142507.5974 161834.3993 160958.145 125780.3837 129373.92 166698.956 155982.8001 130566.7335 184851.8468 1.24636362 0.770928719 0.875481647 0.870741341 0.68043888 0.699878969 0.901797622 0.84382603 0.706331777 1 17.49600993 -4.758317487 24.9887853 0.810013715 1.246364221 0.636190867 0.097382315 54.59107689 436892.4042 0.023883336 0.165308336 1.74E-05 4.758317487 0.436350506 T(ph)SPLVSQNNEQGSTLR ddPTM_A459_MK2206_30min_R1 4 TSPLVSQNNEQGSTLR 16 0 A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 T(0.5)S(0.5)PLVSQNNEQGSTLR;T(0.852)S(0.148)PLVSQNNEQGSTLR;T(0.984)S(0.016)PLVSQNNEQGSTLR;T(0.5)S(0.5)PLVSQNNEQGSTLR 212.43 6.86E-08 43291000 8231.7 9183.9 8611.4 6851 7265.9 7111.1 9317.6 7824.8 8331 9401.6 TRUE FALSE 7531.550689 8586.026441 8026.882161 7378.665207 6976.483817 7513.724337 8696.039905 7756.388599 9197.037263 10566.34119 0.712787005 0.812582737 0.759665244 0.698317902 0.660255399 0.711099917 0.822994426 0.734065696 0.870408886 1 13.36718828 -8.586536786 1.155682929 1.001276527 0.733258504 0.753863366 0.047651223 0.300406875 0.866827656 0.048604935 0.015293136 2.59E-09 8.586536786 -0.268018024 T(ph)SPLVSQNNEQGSTLR ddPTM_A459_MK2206_30min_R2 4 TSPLVSQNNEQGSTLR 16 0 A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 T(0.967)S(0.033)PLVSQNNEQGSTLR;T(0.877)S(0.123)PLVSQNNEQGSTLR;T(0.954)S(0.046)PLVSQNNEQGSTLR;T(0.928)S(0.072)PLVSQNNEQGSTLR 263.04 5.73E-39 83092000 160007 135907 151127 154874 153605 122469 160165 130844 121581 168558 TRUE FALSE 172257.2589 129158.056 156165.4988 142220.2988 147573.6959 127129.6436 139135.1431 147945.7601 132155.8956 163057.9663 1.056417315 0.792099024 0.957729955 0.872206995 0.905038247 0.779659201 0.853286388 0.907320037 0.81048414 1 17.3150254 -4.745265699 24.98952476 0.872147279 1.056417839 0.394811085 0.067163615 924.1127744 1427744.626 0.015652752 0.405458611 1.80E-05 4.745265699 0.18427056 T(ph)SPNSLVAYINNSR ddPTM_A459_MK2206_30min_R2 1 TSPNSLVAYINNSR 14 0 P10070 P10070 GLI2 Zinc finger protein GLI2 1 T(0.966)S(0.034)PNSLVAYINNSR 122.33 0.0041875 4899900 11981 15600 13598 15845 16808 17326 18190 8717.9 11956 14345 TRUE FALSE 12898.27457 14825.32668 14051.35053 14550.41281 16148.03347 17985.35307 15801.63115 9857.359463 12995.91127 13876.92382 0.929476499 1.068343883 1.012569551 1.048533018 1.163660886 1.296061959 1.138698414 0.71034183 0.936512402 1 13.76040017 -7.742015404 24.97023653 0.867570284 1.098507803 0.415336697 0.114570363 215.2525539 276715.6885 0.057185746 0.032952943 1.81E-08 7.742015404 0.230937519 T(ph)SPPCSPANLSR ddPTM_A459_MK2206_30min_R1 3 TSPPCSPANLSR 12 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 T(0.978)S(0.022)PPCSPANLSR;T(0.998)S(0.002)PPCSPANLSR;T(0.969)S(0.031)PPCSPANLSR 152.38 0.0011631 190717000 8531.9 9062.4 9266.6 8214.4 9242.6 8205 9036.8 8540.2 7182.5 7050.6 TRUE FALSE 7806.217102 8472.436113 8637.60901 8847.074511 8874.44767 8669.560009 8433.971561 8465.533932 7929.146578 7924.081557 0.98512579 1.069201024 1.090045445 1.116479487 1.119933914 1.094077584 1.06434689 1.068329985 1.000639193 1 12.95202801 -8.214197294 2.752188084 0.996250602 1.080760486 0.41745921 0.035588865 0.277919825 3.837151494 0.033869349 0.010059064 6.11E-09 8.214197294 0.084509883 T(ph)SPPCSPANLSR ddPTM_A459_MK2206_30min_R2 2 TSPPCSPANLSR 12 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 T(0.995)S(0.005)PPCSPANLSR;T(0.998)S(0.002)PPCSPANLSR 138.2 0.0029475 148940000 72911 79700 78307 81417 73585 70133 76039 71024 64697 69722 TRUE FALSE 78493.12222 75742.21389 80917.7163 74764.97066 70695.68317 72801.96046 66054.98796 80307.08066 70324.22811 67446.97685 1.163775248 1.122989012 1.199723399 1.108499953 1.048166819 1.079395458 0.97936173 1.190669833 1.042659455 1 16.04146616 -5.998337982 5.1073023 1.064342251 1.158358567 0.413288937 0.055956337 0.18805692 14.83645317 0.015848031 0.022589901 1.00E-06 5.998337982 0.094016316 T(ph)SPPGGELSPGAGR ddPTM_A459_MK2206_30min_R2 1 TSPPGGELSPGAGR 14 0 Q99958 Q99958 FOXC2 Forkhead box protein C2 1 T(0.998)S(0.002)PPGGELSPGAGR 102.33 0.017921 4265700 28953 30671 28388 29381 31717 29478 31853 22634 30091 34326 TRUE FALSE 31169.66394 29147.92274 29334.44175 26980.47831 30471.63121 30599.80595 27670.66284 25592.34151 32708.26079 33205.94543 0.938677202 0.877792286 0.883409322 0.812519504 0.917655884 0.921515878 0.833304472 0.770715641 0.985012183 1 15.01915395 -8.416561353 8.466448632 0.999763616 0.870515712 0.499177649 0.049400914 0.245457536 16.71522816 0.049002277 0.012663326 3.83E-09 8.416561353 -0.129247904 T(ph)SPPLLDR ddPTM_A459_MK2206_30min_R1 7 TSPPLLDR 8 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.942)S(0.058)PPLLDR;T(0.992)S(0.008)PPLLDR;T(0.937)S(0.063)PPLLDR;T(0.989)S(0.011)PPLLDR;T(0.93)S(0.07)PPLLDR;T(0.927)S(0.073)PPLLDR;T(0.992)S(0.008)PPLLDR 174.86 0.00023195 4724563000 42809 53905.9 45930.7 37363.3 38778.8 35440.2 43187.5 37321.6 42047.2 41249.5 TRUE FALSE 39167.86975 50396.61611 42813.05205 40241.02784 37234.15828 37446.7935 40306.54068 36995.30119 46418.15691 46359.79948 0.844867109 1.0870758 0.923495195 0.868015572 0.803156155 0.807742784 0.86942871 0.798003909 1.001258794 1 15.50058671 -5.595925354 4.35709496 0.863917488 0.974464424 0.120277606 0.088530531 0.302172929 11.00065019 0.023164341 0.042304681 2.54E-06 5.595925354 0.110546936 T(ph)SPPLLDR ddPTM_A459_MK2206_30min_R2 11 TSPPLLDR 8 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.93)S(0.07)PPLLDR;T(0.992)S(0.008)PPLLDR;T(0.937)S(0.063)PPLLDR;T(0.993)S(0.007)PPLLDR;T(0.988)S(0.012)PPLLDR;T(0.931)S(0.069)PPLLDR;T(0.93)S(0.07)PPLLDR;T(0.863)S(0.137)PPLLDR;T(0.937)S(0.063)PPLLDR;T(0.927)S(0.073)PPLLDR;T(0.649)S(0.351)PPLLDR 174.86 0.00023195 5884695800 707697 928308 740682 786598 745128 660833 835704 652685 602025 761237 TRUE FALSE 761878.8264 882209.5746 765375.9682 722330.4272 715870.5308 685981.4629 725975.0609 737993.1705 654388.0463 736397.899 1.034602119 1.198006643 1.039351102 0.980896915 0.972124624 0.93153642 0.985846187 1.002166317 0.888633777 1 19.49012599 -5.582102661 3.283009101 0.965434551 1.117925549 0.599375816 0.04914192 0.14333112 3.124699336 0.012900663 0.025391541 2.62E-06 5.582102661 0.152490997 T(ph)SPPQPVNPPRPFK ddPTM_A459_MK2206_30min_R2 1 TSPPQPVNPPRPFK 14 1 A0A0A0MQS0;F8W9L8;A8MW92-4;A8MW92 A0A0A0MQS0 PHF20L1 PHD finger protein 20-like protein 1 1 T(0.766)S(0.234)PPQPVNPPRPFK 84.046 0.036726 7745400 49175 38634 43883 47550 39271 36200 52189 38884 28506 44269 TRUE FALSE 52939.87581 36715.49174 45346.03732 43665.0129 37729.02322 37577.61637 45336.52161 43966.27231 30985.40035 42824.50616 1.236205168 0.857347697 1.058880566 1.01962677 0.881014788 0.877479269 1.058658364 1.026661514 0.72354367 1 15.38614899 -4.749584054 24.98322463 0.950998728 1.236205813 0.415838349 0.103379925 552.1853919 1163570.702 0.025290296 0.40706481 1.78E-05 4.749584054 0.285207085 T(ph)SPQELSEELSR ddPTM_A459_MK2206_30min_R1 1 TSPQELSEELSR 12 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-2;Q96PU5-3;K7ERN1;Q96PU5-9;Q96PU5-6;Q96PU5-5 A0A1B0GVY1;Q96PU5-9 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 T(0.982)S(0.018)PQELSEELSR 127.79 0.0059462 11465000 2222 2273.9 2208.1 2052.6 2049.2 2329.3 2438.1 2325.8 2639.5 3156.8 TRUE FALSE 2033.007232 2125.868697 2058.220324 2210.691608 1967.576025 2461.182953 2275.458798 2305.465776 2913.885471 3547.888217 0.573018964 0.599192693 0.580125471 0.623100693 0.554576668 0.693703635 0.641355832 0.649813533 0.821301375 1 11.79274484 -8.584552766 0.800151491 1.00501044 0.594848004 0.921805578 0.03661688 0.18166815 0.256935995 0.034800521 0.012688224 2.60E-09 8.584552766 -0.410162436 T(ph)SPQELSEELSR ddPTM_A459_MK2206_30min_R2 2 TSPQELSEELSR 12 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-2;Q96PU5-3;K7ERN1;Q96PU5-9;Q96PU5-6;Q96PU5-5 A0A1B0GVY1;Q96PU5-9 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 T(0.976)S(0.024)PQELSEELSR;T(0.887)S(0.113)PQELSEELSR 128.73 0.0056357 18540800 21054.7 20253.3 17573.4 18505.5 18014.3 18682.4 22754 13879.9 18072.1 23979 TRUE FALSE 22666.66402 19247.55057 18159.28839 16993.54145 17306.96807 19393.37182 19766.37247 15694.05059 19643.97859 23196.56719 0.977155966 0.829758576 0.782843782 0.732588633 0.7461004 0.836044905 0.852124899 0.676567807 0.84684852 1 14.5016237 -4.767719762 3.129616686 0.795400118 1.008044601 0.251635517 0.083702198 0.456107335 6.519564602 0.020063344 0.24660988 1.71E-05 4.767719762 0.212644483 T(ph)SPQVLGSILK ddPTM_A459_MK2206_30min_R1 2 TSPQVLGSILK 11 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 T(0.872)S(0.128)PQVLGSILK;T(0.985)S(0.015)PQVLGSILK 171.36 0.00072545 130034000 13222.8 13625.7 13018.5 11846.8 12274 11293.1 12691.1 11830 13029 12487.2 TRUE FALSE 12098.13142 12738.66445 12134.84049 12759.24259 11785.10059 11932.50556 11844.49988 11726.57156 14383.41117 14034.20861 0.86204586 0.907686697 0.864661544 0.909152981 0.839741015 0.850244278 0.84397348 0.835570561 1.024882241 1 13.77666009 -8.265502525 24.99742998 1.012441144 0.865156307 0.849025103 0.02501272 135.4182494 833107.6123 0.022533269 0.006653361 5.43E-09 8.265502525 -0.147284837 T(ph)SPQVLGSILK ddPTM_A459_MK2206_30min_R2 2 TSPQVLGSILK 11 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 T(0.997)S(0.003)PQVLGSILK;T(0.892)S(0.108)PQVLGSILK 140.33 0.0025617 147569000 842690 773490 793750 784920 786990 552800 877130 711730 584170 881740 TRUE FALSE 907206.9943 735079.6114 820213.2288 720789.5252 756088.8183 573837.1914 761961.7774 804755.5547 634980.0507 852968.896 1.063587428 0.861789468 0.961598052 0.845036119 0.886420152 0.672752775 0.893305466 0.943475851 0.744435177 1 19.70213361 -1.522879032 0.912265249 0.852827634 108.3343207 0.269754538 0.094143128 1266.616707 2.640803026 0.030423337 283599.9941 0.02999998 1.522879032 107.4814931 T(ph)SPSGGTWSSVVSGAK ddPTM_A459_MK2206_30min_R1 2 TSPSGGTWSSVVSGAK 16 0 F8WB06;F8VRK6 F8WB06 ATXN2 1 T(0.92)S(0.08)PSGGTWSSVVSGAK;T(0.982)S(0.018)PSGGTWSSVVSGAK 202.32 1.15E-06 56985000 9550 9859.9 9839 8646.6 8519 7855.5 8971.2 8868 8082.7 7490.8 TRUE FALSE 8737.722351 9218.018718 9171.156093 9312.56263 8179.670191 8300.271621 8372.747617 8790.468011 8922.925589 8418.816857 1.037880085 1.094930425 1.08936401 1.106160496 0.971593792 0.985919015 0.994527825 1.044145295 1.05987881 1 13.03940178 -6.254086481 24.99970765 1.009639317 1.083521393 0.590336815 0.029674939 441.9712029 1502693.152 0.009575202 0.012095149 5.57E-07 6.254086481 0.073882076 T(ph)SPSGGTWSSVVSGAK ddPTM_A459_MK2206_30min_R2 1 TSPSGGTWSSVVSGAK 16 0 F8WB06;F8VRK6 F8WB06 ATXN2 1 T(0.987)S(0.013)PSGGTWSSVVSGAK 228.76 8.42E-15 16138000 75584 77781 75518 88520 79944 64134 93520 71253 68910 85718 TRUE FALSE 81370.76915 73918.50864 78035.73243 81287.63284 76804.99687 66574.66431 81240.71166 80566.01175 74903.66724 82921.02868 0.981304386 0.891432605 0.941084954 0.98030179 0.926242693 0.802868288 0.979735936 0.97159928 0.90331329 1 16.33945039 -11.18069879 5.438863687 1.00096109 0.930203389 0.133593816 0.052785253 0.000631418 3.97E-05 0.05245999 0.012552354 6.60E-12 11.18069879 -0.070757702 T(ph)SPSGGTWSSVVSGVPR ddPTM_A459_MK2206_30min_R1 4 TSPSGGTWSSVVSGVPR 17 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4 Q99700 ATXN2 Ataxin-2 1 T(0.981)S(0.019)PSGGTWSSVVSGVPR;T(0.982)S(0.018)PSGGTWSSVVSGVPR;T(0.861)S(0.139)PSGGTWSSVVSGVPR;T(0.987)S(0.013)PSGGTWSSVVSGVPR 270.79 2.84E-51 263424000 14155.1 14388 13674.4 10840.6 12744.2 11539.2 12218.2 11598.6 12641 11069.8 TRUE FALSE 12951.13441 13451.33858 12746.21983 11675.54489 12236.57153 12192.53953 11403.14617 11497.19466 13955.07719 12441.2104 1.040986689 1.081192115 1.024516058 0.938457314 0.983551531 0.980012325 0.916562441 0.924121874 1.121681632 1 13.60283923 -5.547476326 5.800227457 0.975033099 1.059572892 0.255581601 0.055140834 0.200945284 21.01360665 0.014819184 0.026922198 2.83E-06 5.547476326 0.084539793 T(ph)SPSGGTWSSVVSGVPR ddPTM_A459_MK2206_30min_R2 2 TSPSGGTWSSVVSGVPR 17 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4 Q99700 ATXN2 Ataxin-2 1 T(0.872)S(0.128)PSGGTWSSVVSGVPR;T(0.5)S(0.5)PSGGTWSSVVSGVPR 317.7 4.45E-118 183659000 623440 545600 496000 585420 564220 492270 703290 571460 538140 635010 TRUE FALSE 671171.0457 518506.2974 512536.3924 537589.3133 542065.8878 511003.6798 610947.1782 646151.7841 584946.4445 614289.6757 1.092596982 0.844074576 0.834356188 0.87513975 0.88242715 0.831861091 0.99455876 1.051868214 0.952232257 1 19.22855961 -7.344917138 7.223061803 1.005059199 0.887290012 0.327096041 0.074253563 0.308685276 23.27507166 0.031031712 0.020833368 4.52E-08 7.344917138 -0.117769187 T(ph)SPSKSPFLHSGMK ddPTM_A459_MK2206_30min_R1 1 TSPSKSPFLHSGMK 14 1 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3;H0YEW5 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 T(0.99)S(0.009)PS(0.001)KSPFLHSGMK 101.78 0.011141 23459000 3656.5 2559.3 3250.7 2310.1 3323.9 3226.7 3675.5 3605.5 2654.9 2245.7 TRUE FALSE 3345.495474 2392.689105 3030.051541 2488.024302 3191.502025 3409.392966 3430.314101 3573.977494 2930.886356 2523.91427 1.325518665 0.948007281 1.200536633 0.985780037 1.264504925 1.350835488 1.359124651 1.416045519 1.161246398 1 11.30144719 -6.417823715 7.472448735 1.291712451 1.109643266 0.16403019 0.148991834 0.371409198 23.40917659 0.043624671 0.049420299 3.82E-07 6.417823715 -0.182069184 T(ph)SPSSPAPLPHQEATPR ddPTM_A459_MK2206_30min_R2 1 TSPSSPAPLPHQEATPR 17 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 T(0.982)S(0.018)PSSPAPLPHQEATPR 195.28 2.18E-07 5457600 12254 12830 12520 9892.4 11971 16180 17580 8189.8 13214 14263 TRUE FALSE 13192.17566 12192.88086 12937.41055 9084.159276 11500.95839 16795.74124 15271.72488 9260.23498 14363.32983 13797.59948 0.956121076 0.883695811 0.937656624 0.658386938 0.833547778 1.217294448 1.106839266 0.671148267 1.041002086 1 13.75212967 T(ph)SPSVTPTPAR ddPTM_A459_MK2206_30min_R1 2 TSPSVTPTPAR 11 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 T(0.877)S(0.123)PSVTPTPAR;T(0.943)S(0.057)PSVTPTPAR 217.22 4.25E-05 24616000 9732.3 9841.3 9734.2 8213.2 9773.6 7993.1 9518.8 8543.4 7959.4 8454.5 TRUE FALSE 8904.516779 9200.629581 9073.469625 8845.782087 9384.296816 8445.662414 8883.81822 8468.705955 8786.808113 9501.907288 0.937129411 0.968292923 0.954910351 0.930948053 0.987622435 0.888838647 0.934951053 0.891263796 0.924741512 1 13.21400141 -6.761245407 25 0.921599996 0.955047821 0.141858062 0.032352282 8.150644222 1050533.487 0.010264333 0.009651604 1.73E-07 6.761245407 0.033447825 T(ph)SPSVTPTPAR ddPTM_A459_MK2206_30min_R2 1 TSPSVTPTPAR 11 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 T(0.999)S(0.001)PSVTPTPAR 181.4 9.90E-05 12505000 42737 55532 48229 62321 57282 54803 61635 40824 49994 55726 TRUE FALSE 46008.97758 52774.36163 49836.93079 57229.17494 55032.82086 56888.56657 53542.25046 46159.83697 54342.38775 53907.66518 0.853477468 0.97897695 0.92448691 1.061614795 1.020871905 1.055296429 0.99322147 0.856275945 1.008064207 1 15.71820281 -3.902945371 1.278254107 0.9920591 2.53E-12 0.336382461 0.057333861 14.39919339 3.753379116 0.017830089 31.95092696 0.000125042 3.902945371 -0.9920591 T(ph)SPTPGDFPK ddPTM_A459_MK2206_30min_R2 3 TSPTPGDFPK 10 0 Q9UPU7;C9JW56;Q9UPU7-2 Q9UPU7 TBC1D2B TBC1 domain family member 2B 1 T(0.986)S(0.014)PTPGDFPK;T(0.904)S(0.096)PTPGDFPK;T(0.999)S(0.001)PTPGDFPK 159.83 0.0010576 33984000 336270 373370 386140 385680 358100 260199 404720 316550 300040 378270 TRUE FALSE 362015.0897 354828.9887 399013.7149 354168.7103 344039.1947 270101.0553 351579.7778 357924.1719 326136.9369 365927.0809 0.98930937 0.969671301 1.090418654 0.967866902 0.940185115 0.738128084 0.960791907 0.978129771 0.891262095 1 18.48119666 -6.172925105 3.348935838 0.909597189 1.012812324 0.25477634 0.074133352 0.343529281 7.385107268 0.023545221 0.03102867 6.72E-07 6.172925105 0.103215135 T(ph)SPTPPESATTVK ddPTM_A459_MK2206_30min_R1 4 TSPTPPESATTVK 13 0 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 T(0.864)S(0.136)PTPPESATTVK;T(0.998)S(0.002)PTPPESATTVK;T(0.989)S(0.011)PTPPESATTVK;T(0.991)S(0.009)PTPPESATTVK 217.91 4.07E-08 414693000 25368.2 26829 26185.3 21695.5 23134.6 19683.6 22986.6 22400.9 21856.8 20006 TRUE FALSE 23210.50138 25082.42722 24407.91479 23366.49117 22213.09989 20798.06842 21453.20586 22205.05129 24128.89258 22484.49432 1.032289232 1.11554331 1.085544307 1.039226893 0.987929707 0.92499605 0.954133349 0.987571745 1.073134767 1 14.45664282 -6.069080363 2.81359628 0.982445452 1.080919233 0.499443099 0.040403685 0.221774204 3.452821881 0.013205745 0.018771769 8.53E-07 6.069080363 0.098473781 T(ph)SPTPPESATTVK ddPTM_A459_MK2206_30min_R2 6 TSPTPPESATTVK 13 0 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 T(0.991)S(0.009)PTPPESATTVK;T(0.999)S(0.001)PTPPESATTVK;T(0.987)S(0.013)PTPPESATTVK;T(0.989)S(0.011)PTPPESATTVK;T(0.988)S(0.012)PTPPESATTVK;T(0.985)S(0.014)PT(0.001)PPESATTVK 217.91 4.07E-08 631176300 388385 446257 429122 420874 434265 332308 481429 358077 369315 408558 TRUE FALSE 418120.0542 424096.5263 443428.7133 386487.2479 417213.5741 344954.2138 418216.794 404878.8934 401437.3511 395226.7859 1.057924384 1.073046012 1.121960174 0.977887283 1.055630815 0.872800696 1.058169155 1.024421694 1.015713928 1 18.5923212 -5.768135078 24.98099033 1.001037207 1.083183775 0.358960127 0.051217956 167.2882398 624137.7003 0.01423121 0.021658423 1.71E-06 5.768135078 0.082146568 T(ph)SPTTPEAS(ph)ATNSPCTSKPATPAPSEK ddPTM_A459_MK2206_30min_R2 1 TSPTTPEASATNSPCTSKPATPAPSEK 27 1 Q12873-2;Q12873;Q12873-3 Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 2 T(0.435)S(0.151)PT(0.082)T(0.308)PEAS(0.391)AT(0.336)NS(0.265)PCT(0.027)S(0.005)KPATPAPSEK 69.142 0.0026943 8134500 36623 33958 35553 33288 33036 25620 45114 36654 28938 41024 TRUE FALSE 39426.88504 32271.6951 36738.31928 30568.26392 31738.84065 26594.98705 39190.47761 41444.80365 31454.97493 39685.39024 0.993486137 0.813188302 0.925739146 0.770264919 0.799761334 0.670145534 0.987529098 1.044334033 0.792608432 1 15.27632037 -10.71113088 6.932736087 1.000000319 0.864768623 0.112630001 0.11247317 5.75E-07 6.72E-08 0.112925977 0.027388508 1.94E-11 10.71113088 -0.135231696 T(ph)SPTVATQTGASATSTR ddPTM_A459_MK2206_30min_R1 5 TSPTVATQTGASATSTR 17 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 T(0.983)S(0.017)PTVATQTGASATSTR;T(0.978)S(0.022)PTVATQTGASATSTR;T(0.879)S(0.121)PTVATQTGASATSTR;T(0.985)S(0.015)PTVATQTGASATSTR;T(0.973)S(0.027)PTVATQTGASATSTR 239.58 3.58E-22 167421700 19482.9 20318.1 20000.41 16813.5 18379.5 16238.04 18450.6 17759.64 17366.7 16068.9 TRUE FALSE 17825.77705 18995.388 18642.83789 18108.47868 17647.4056 17157.42379 17219.79414 17604.36934 19172.03061 18059.63665 0.987050703 1.051814517 1.032293078 1.002704486 0.977173901 0.95004258 0.953496157 0.974790893 1.06159559 1 14.14048125 -4.425103455 19.88661688 0.998267631 0.000229724 0.008809272 0.036584642 1852.783471 355884.0931 0.009708612 4655.963328 3.76E-05 4.425103455 -0.998037907 T(ph)SPTVATQTGASATSTR ddPTM_A459_MK2206_30min_R2 3 TSPTVATQTGASATSTR 17 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 T(0.983)S(0.017)PTVATQTGASATSTR;T(0.504)S(0.385)PT(0.107)VAT(0.002)QT(0.001)GASATSTR;T(0.905)S(0.095)PTVATQTGASATSTR 242.67 1.93E-22 184842000 116737 139894 125871 158453 134014 131986 144240 104333 113913 141725 TRUE FALSE 125674.4745 132947.0674 130067.4763 145506.883 128751.937 137008.8197 125301.1147 117969.6813 123820.9468 137100.5249 0.916659324 0.969705021 0.94870152 1.061315288 0.939106084 0.99933111 0.913936069 0.860461194 0.903139845 1 17.06487457 -7.335169654 6.95007422 0.907158517 0.973717031 0.202762186 0.049265164 0.342001006 27.57814578 0.020225043 0.013581201 4.62E-08 7.335169654 0.066558514 T(ph)SPTVFSEDQLSK ddPTM_A459_MK2206_30min_R1 1 TSPTVFSEDQLSK 13 0 O95936-3;O95936-2;O95936;O95936-4 O95936-3 EOMES Eomesodermin homolog 1 T(0.654)S(0.345)PT(0.002)VFSEDQLSK 144.51 0.0017929 0 1181.4 1231.1 1370.5 1286.2 1289.1 1042.9 1396.3 1438.2 1197.4 1212.5 TRUE FALSE 1080.915726 1150.955166 1277.474278 1385.263347 1237.752417 1101.948097 1303.155375 1425.625969 1321.874015 1362.713654 0.79320826 0.844605294 0.937448799 1.016547639 0.90829971 0.808642442 0.956294355 1.046166937 0.970030653 1 10.41226673 -3.582579303 0.68932951 0.959507359 1.14E-15 0.4274386 0.063037306 15.03972706 1.525973966 0.028556392 16.44874543 0.000261469 3.582579303 -0.959507359 T(ph)SPTVFSEDQLSK ddPTM_A459_MK2206_30min_R2 1 TSPTVFSEDQLSK 13 0 O95936-3;O95936-2;O95936;O95936-4 O95936-3 EOMES Eomesodermin homolog 1 T(0.616)S(0.384)PTVFSEDQLSK 153.75 0.00094287 3347400 14520 18634 17016 18392 17584 16494 17581 13225 17182 19310 TRUE FALSE 15631.66236 17708.66266 17583.30495 16889.31477 16893.56381 17121.69073 15272.59358 14953.55291 18676.4593 18679.91628 0.836816511 0.948005462 0.941294633 0.904142958 0.904370424 0.916582841 0.817594327 0.800514985 0.999814936 1 14.18920037 T(ph)SPYGSSLDLSTGSSSRPPPK ddPTM_A459_MK2206_30min_R1 2 TSPYGSSLDLSTGSSSRPPPK 21 1 J3KNZ9 J3KNZ9 FBRS 1 T(0.47)S(0.47)PY(0.044)GS(0.008)S(0.008)LDLSTGSSSRPPPK;T(0.346)S(0.346)PY(0.297)GS(0.006)S(0.006)LDLSTGSSSRPPPK 85.808 0.0014886 24968000 3840.2 4391.1 4297.1 3174.2 3275.4 3285.2 3217.6 3196 4898.9 5034.4 TRUE FALSE 3513.570824 4105.238592 4005.424824 3418.677434 3144.933882 3471.205185 3002.959775 3168.057709 5408.158186 5658.09948 0.620980744 0.725550798 0.707909933 0.604209496 0.555828665 0.613493134 0.530736475 0.559915519 0.955825928 1 12.46610183 -8.270623222 20.90661777 0.977914134 0.616453419 0.855441547 0.059699811 30.54877045 69534.92932 0.061314299 0.017027667 5.36E-09 8.270623222 -0.361460715 T(ph)SPYGSSLDLSTGSSSRPPPK ddPTM_A459_MK2206_30min_R2 2 TSPYGSSLDLSTGSSSRPPPK 21 1 J3KNZ9 J3KNZ9 FBRS 1 T(0.5)S(0.5)PYGSSLDLSTGSSSRPPPK;T(0.768)S(0.215)PY(0.016)GSSLDLSTGSSSRPPPK 137.72 3.99E-05 27064000 88763 92576 81880 83795 85520 63260 91796 70067 58749 90394 TRUE FALSE 95558.76353 87978.81046 84609.83833 76948.68045 82162.0551 65667.40363 79743.07493 79224.99748 63858.88183 87444.45118 1.092793908 1.006110843 0.967583845 0.879972136 0.939591409 0.750961356 0.91192836 0.906003713 0.730279406 1 16.41607922 -5.119179411 0.876866233 0.86097345 1.14956331 0.472412685 0.077120076 1.24405588 1.051531239 0.027762562 0.312525864 7.60E-06 5.119179411 0.28858986 T(ph)SPYILR ddPTM_A459_MK2206_30min_R1 3 TSPYILR 7 0 P49454 P49454 CENPF Centromere protein F 1 T(0.5)S(0.5)PYILR;T(0.695)S(0.305)PYILR;T(0.994)S(0.006)PYILR 162.25 0.0011804 58403900 14665.2 14540.2 13091.4 11357.6 11754.8 10167.3 12507.2 10812.7 11115.5 11154.9 TRUE FALSE 13417.84773 13593.63034 12202.79224 12232.36432 11286.58142 10742.96374 11672.86751 10718.1657 12270.996 12536.85323 1.070272379 1.084293649 0.973353681 0.975712493 0.900272279 0.856910705 0.931084324 0.854932694 0.978793943 1 13.61388765 -5.519657228 1.4100315 0.912416882 1.088512605 0.611174447 0.046659413 0.289127172 1.06163825 0.014225944 0.048578297 3.02E-06 5.519657228 0.176095723 T(ph)SPYILR ddPTM_A459_MK2206_30min_R2 2 TSPYILR 7 0 P49454 P49454 CENPF Centromere protein F 1 T(0.679)S(0.321)PYILR;T(0.695)S(0.305)PYILR 131.03 0.0095473 37220000 261743 257800 201636 247775 246318 197434 261775 198943 180059 237643 TRUE FALSE 281782.2453 244998.0269 208358.4436 227530.9899 236646.3177 204947.4892 227403.6281 224945.5332 195720.2063 229888.7284 1.225733194 1.065724399 0.906344757 0.989744001 1.029395044 0.891507342 0.989189986 0.978497444 0.851369303 1 17.81057621 -4.891430696 2.764045131 0.956894587 1.245636575 0.713166816 0.053269817 0.180151624 2.23060034 0.013497238 0.106945216 1.28E-05 4.891430696 0.288741988 T(ph)SQLGDSPFYPGK ddPTM_A459_MK2206_30min_R1 1 TSQLGDSPFYPGK 13 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 T(0.506)S(0.008)QLGDS(0.486)PFYPGK 143.46 0.0016868 8937600 4269.3 4764.6 4026 3684.9 3405.6 3609.4 3474.4 3394.1 3624.5 3125.4 TRUE FALSE 3906.173616 4454.423674 3752.726337 3968.711636 3269.947741 3813.761109 3242.629115 3364.425742 4001.279745 3512.598148 1.112046825 1.268127889 1.068361987 1.129850746 0.930919964 1.085737949 0.923142637 0.957816864 1.139122546 1 11.77832282 -5.813228346 1.604633791 1.00495767 1.182692638 0.410798256 0.07951484 0.345436777 1.810050863 0.024751145 0.051213608 1.54E-06 5.813228346 0.177734968 T(ph)SRWVT(ph)K ddPTM_A459_MK2206_30min_R2 1 TSRWVTK 7 1 I3L4N7 I3L4N7 SERPINF1 2 T(0.974)S(0.026)RWVT(1)K 94.309 0.040372 0 15684 9962.1 15323 15963 16117 15360 10191 24240 23427 16203 TRUE FALSE 16884.7791 9467.3966 15833.86117 14658.77184 15484.1656 15944.53556 8852.909458 27408.25123 25464.63811 15674.29744 1.077227172 0.604007716 1.010179961 0.935210774 0.987869833 1.017240845 0.564804228 1.748611148 1.624611133 1 13.93611316 -7.766575748 24.99999996 1.514958398 0.890158867 0.532031083 0.244267253 88.31554747 429843.3315 0.121889995 0.061355404 1.71E-08 7.766575748 -0.624799531 T(ph)SSAVWNSPPLQGAR ddPTM_A459_MK2206_30min_R2 1 TSSAVWNSPPLQGAR 15 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 T(1)SSAVWNSPPLQGAR 225.33 6.16E-10 8238300 32434 30879 26278 30371 31589 36394 38591 26628 26681 36306 TRUE FALSE 34917.17198 29345.59376 27154.0954 27889.59215 30348.65714 37778.99917 33523.95534 30108.37103 29001.66515 35121.33819 0.994186833 0.835548851 0.773150933 0.794092526 0.864108793 1.075670835 0.954518167 0.857267194 0.825756268 1 15.1000602 -6.54325138 24.99971315 0.938400142 0.841114863 0.218539074 0.085124014 389.1147609 477488.1615 0.029882378 0.029885303 2.86E-07 6.54325138 -0.097285279 T(ph)SSDPNLNNHCQEVR ddPTM_A459_MK2206_30min_R1 2 TSSDPNLNNHCQEVR 15 0 J3QR65;Q9NYA4 J3QR65 MTMR4 Myotubularin-related protein 4 1 T(0.821)S(0.141)S(0.038)DPNLNNHCQEVR;T(0.374)S(0.374)S(0.253)DPNLNNHCQEVR 206.63 2.72E-06 9920000 4342.5 3605.9 3810.2 3281.7 4351.2 4030.3 3885 3977 3577.1 3205.4 TRUE FALSE 3973.147572 3371.155255 3551.57424 3534.457103 4177.88249 4258.492103 3625.838739 3942.229508 3948.952346 3602.509152 1.102883408 0.935779789 0.985861268 0.981109819 1.159714608 1.182090572 1.006475927 1.094301039 1.096167193 1 11.81478638 -6.24188249 24.74660957 1.09495578 0.99561027 0.295350325 0.066352002 849.804072 1075312.59 0.019598449 0.025262056 5.73E-07 6.24188249 -0.09934551 T(ph)SSEASMDAAYLDK ddPTM_A459_MK2206_30min_R2 1 TSSEASMDAAYLDK 14 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 T(0.537)S(0.069)S(0.388)EAS(0.005)MDAAYLDK 145.69 0.0011976 6891500 18007 16964 16924 16504 18495 16384 35323 22322 27395 32307 TRUE FALSE 19385.62977 16121.59243 17488.23771 15155.57041 17768.79337 17007.5046 30685.04767 25239.56204 29777.76758 31252.82524 0.620284074 0.515844321 0.559573017 0.484934411 0.568549987 0.544190948 0.98183276 0.807592973 0.952802422 1 14.93169899 -7.255737785 24.94182993 0.919523126 0.545865077 0.91122376 0.059035746 119.7257647 523746.1557 0.021863038 0.016454521 5.55E-08 7.255737785 -0.373658049 T(ph)SSEDNLYLAVLR ddPTM_A459_MK2206_30min_R1 6 TSSEDNLYLAVLR 13 0 Q15149-4 Q15149-4 PLEC Plectin 1 T(0.48)S(0.48)S(0.039)EDNLYLAVLR;T(0.389)S(0.389)S(0.222)EDNLYLAVLR;T(0.386)S(0.386)S(0.228)EDNLYLAVLR;T(0.818)S(0.12)S(0.061)EDNLYLAVLR;T(0.475)S(0.475)S(0.05)EDNLYLAVLR;T(0.58)S(0.096)S(0.324)EDNLYLAVLR 267.77 1.84E-50 1784914400 18518.72 21217.26 20035.47 17432.88 16867.72 16534.65 18850.64 17640.63 17562.43 18163.56 TRUE FALSE 16943.60562 19836.01252 18675.51812 18775.56344 16195.84299 17470.82759 17593.1482 17486.39983 19388.10745 20413.79894 0.83000747 0.971696281 0.914847754 0.919748622 0.793377217 0.855834215 0.86182627 0.856597044 0.949754992 1 14.31725707 -8.470861967 3.705182472 0.999362054 0.877896576 0.427528752 0.047595414 0.20810042 6.068480432 0.048603876 0.012805416 3.38E-09 8.470861967 -0.121465478 T(ph)SSEDNLYLAVLR ddPTM_A459_MK2206_30min_R2 1 TSSEDNLYLAVLR 13 0 Q15149-4 Q15149-4 PLEC Plectin 1 T(0.48)S(0.04)S(0.48)EDNLYLAVLR 236.05 1.99E-14 27484000 91395 102890 94393 96298 89834 82297 101720 86193 85339 93306 TRUE FALSE 98392.27147 97780.63222 97540.01551 88430.14536 86306.66578 85428.87 88364.04181 97458.72104 92761.63196 90261.43286 1.090080983 1.083304675 1.0806389 0.979711296 0.956185417 0.94646038 0.978978939 1.079738244 1.027699528 1 16.46182206 -5.753822439 23.99618227 0.994486848 1.084537895 0.568055852 0.035610506 87.94890108 277066.2636 0.011268067 0.019016404 1.76E-06 5.753822439 0.090051048 T(ph)SSFAEPGGGGGGGGGGPGGSASGPGGTGGGK ddPTM_A459_MK2206_30min_R1 2 TSSFAEPGGGGGGGGGGPGGSASGPGGTGGGK 32 0 P49840 P49840 GSK3A Glycogen synthase kinase-3 alpha 1 T(0.333)S(0.333)S(0.333)FAEPGGGGGGGGGGPGGSASGPGGTGGGK;T(0.333)S(0.333)S(0.333)FAEPGGGGGGGGGGPGGSASGPGGTGGGK 176.85 3.70E-34 21387000 5436.1 5936 5487.8 4521.9 6574.9 8922.8 10458.9 12086.1 12093 11476.8 TRUE FALSE 4973.731149 5549.565321 5115.303426 4870.177522 6313.00781 9428.001225 9761.205864 11980.4325 13350.11063 12898.63263 0.385601427 0.430244467 0.396577186 0.377573163 0.489432329 0.730930285 0.75676284 0.92881415 1.035002004 1 13.65493051 -7.155695203 0.931054348 1.019275402 0.383683198 0.971066327 0.043324747 0.089968616 0.155638837 0.032820193 0.020677171 6.99E-08 7.155695203 -0.635592204 down T(ph)SSFAEPGGGGGGGGGGPGGSASGPGGTGGGK ddPTM_A459_MK2206_30min_R2 1 TSSFAEPGGGGGGGGGGPGGSASGPGGTGGGK 32 0 P49840 P49840 GSK3A Glycogen synthase kinase-3 alpha 1 T(0.431)S(0.139)S(0.431)FAEPGGGGGGGGGGPGGSASGPGGTGGGK 122.29 7.28E-17 4026600 26718 33027 26454 28213 28246 38569 48460 36540 46236 46655 TRUE FALSE 28763.55062 31386.92721 27335.96316 25907.90765 27136.92012 40036.77032 42097.14379 41315.90346 50257.5237 45132.65117 0.637311345 0.695437259 0.605680421 0.574039126 0.601270243 0.887091037 0.932742542 0.915432672 1.113551329 1 15.46188391 -6.882605768 3.103576964 0.978971237 0.621638222 0.897747027 0.059171938 0.081492499 1.567419738 0.023679439 0.020611171 1.31E-07 6.882605768 -0.357333015 T(ph)SSGLGGSTTDFLEEWK ddPTM_A459_MK2206_30min_R1 1 TSSGLGGSTTDFLEEWK 17 0 Q96IZ0;A0A0B4J260;F8W1M8 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 T(0.812)S(0.181)S(0.008)GLGGSTTDFLEEWK 95.751 0.01466 4694400 1302.6 1389.7 1428.5 1044.7 1266.7 1211.2 1126.7 1255.3 1060.4 768.91 TRUE FALSE 1191.80703 1299.230277 1331.5374 1125.162975 1216.244657 1279.777097 1051.539899 1244.325044 1170.632375 864.1683758 1.379137519 1.503445756 1.540830974 1.302018225 1.407416299 1.480934889 1.216822934 1.439910415 1.354634591 1 9.755168626 -13.10875651 0.211870029 1.44E-10 1.470378018 0.671019178 0.087048177 44.57570612 0.759723814 19.51136233 0.188407728 7.78E-14 13.10875651 1.470378018 T(ph)SSGTSLSAMHSSGSSGK ddPTM_A459_MK2206_30min_R2 2 TSSGTSLSAMHSSGSSGK 18 0 A6NNK5;Q12888;Q12888-3;Q12888-2;M0R142 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 T(0.431)S(0.111)S(0.111)GT(0.135)S(0.2)LS(0.012)AMHSSGSSGK;T(0.431)S(0.431)S(0.13)GT(0.004)S(0.004)LS(0.001)AMHSSGSSGK 76.78 0.019408 3630200 15081.7 30376.9 22639.9 59177 57772 90382 55360 35274 60841 24261.6 TRUE FALSE 16236.36655 28868.42732 23394.70297 54342.0498 55503.581 93821.55034 48091.1655 39884.43291 66132.8402 23469.94598 0.691793946 1.230016777 0.99679407 2.315388789 2.364878941 3.997518802 2.049053097 1.699383243 2.81776704 1 14.5185269 -5.774652369 5.430221674 2.417550313 0.987753719 0.407094251 0.739555708 0.162057115 14.31955561 0.208955444 0.33410315 1.68E-06 5.774652369 -1.429796594 T(ph)SSISGPLSPAYTGQVPYNYNQLEGR ddPTM_A459_MK2206_30min_R2 1 TSSISGPLSPAYTGQVPYNYNQLEGR 26 0 Q01082-3 Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 T(0.264)S(0.264)S(0.208)IS(0.264)GPLSPAYTGQVPYNYNQLEGR 162.1 3.89E-14 22156000 9766 13767 11092 16329 16825 12933 17981 10255 14914 14617 TRUE FALSE 10513.69247 13083.3508 11461.80174 14994.86847 16164.36596 13425.17438 15620.0731 11595.36371 16211.19276 14140.04849 0.743540058 0.925269161 0.810591403 1.060453822 1.14316199 0.949443306 1.104668991 0.820037054 1.146473633 1 13.78749945 -5.760364986 24.99616525 1.028751166 0.83634707 0.465240271 0.100786207 25.76221782 599334.7428 0.026687092 0.04305977 1.74E-06 5.760364986 -0.192404096 T(ph)SSLDTLAAPYLAGHWPR ddPTM_A459_MK2206_30min_R1 2 TSSLDTLAAPYLAGHWPR 18 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 T(0.309)S(0.309)S(0.309)LDT(0.074)LAAPYLAGHWPR;T(0.487)S(0.487)S(0.026)LDTLAAPYLAGHWPR 241.98 4.78E-25 59275000 4299.9 4210.7 4010.1 3448 3842.3 3717.4 4030.6 3798.3 3974.9 3772.5 TRUE FALSE 3934.170925 3936.582665 3737.905585 3713.565557 3689.253055 3927.875975 3761.726028 3765.091864 4388.105079 4239.865781 0.927899874 0.928468699 0.881609414 0.875868659 0.870134397 0.926415169 0.887227621 0.888021475 1.034963205 1 12.04980288 -8.259133427 24.99953445 1.017481613 0.897555327 0.820041026 0.022348558 78.24667711 848319.7052 0.017748789 0.005983822 5.51E-09 8.259133427 -0.119926286 T(ph)SSLDTLAAPYLAGHWPR ddPTM_A459_MK2206_30min_R2 1 TSSLDTLAAPYLAGHWPR 18 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 T(0.45)S(0.45)S(0.045)LDT(0.056)LAAPYLAGHWPR 87.356 0.0093685 17498000 13189 13576 14335 17523 14720 16585 16633 11829 12459 18546 TRUE FALSE 14198.75998 12901.83558 14812.92175 16091.31485 14142.01884 17216.1538 14449.06712 13375.09092 13542.6613 17940.84554 0.791420892 0.719131969 0.825653491 0.896909503 0.788258213 0.9596066 0.805372695 0.745510622 0.754850783 1 14.13096026 -11.98000212 2.23592182 2.980577281 0.811781983 0.41184898 0.068203619 5070865.85 265997.1896 51553031.68 0.019057891 1.05E-12 11.98000212 -2.168795299 T(ph)SSLTQFPPSQSEER ddPTM_A459_MK2206_30min_R2 1 TSSLTQFPPSQSEER 15 0 Q9H6Z4;Q9H6Z4-3;Q9H6Z4-2;B7Z7F3 Q9H6Z4 RANBP3 Ran-binding protein 3 1 T(0.38)S(0.38)S(0.231)LT(0.008)QFPPSQSEER 226.7 2.64E-13 11737000 59145 79303 59548 52887 60050 58469 80073 71967 72912 88301 TRUE FALSE 63673.18667 75364.92834 61533.3006 48565.96292 57692.13527 60694.07877 69559.31892 81373.334 79253.75397 85419.7456 0.745415316 0.882289309 0.720363894 0.568556633 0.675395775 0.710539212 0.814323649 0.952629084 0.927815383 1 16.38228198 -7.597912604 2.417631388 0.961635605 0.716118893 0.682604225 0.074106335 0.200572812 2.352151652 0.049058032 0.024721181 2.52E-08 7.597912604 -0.245516712 T(ph)SSPIPAQHAPRPYASSLEK ddPTM_A459_MK2206_30min_R2 2 TSSPIPAQHAPRPYASSLEK 20 1 H0YKX0;Q96EP0-3;Q96EP0 H0YKX0 RNF31 E3 ubiquitin-protein ligase RNF31 1 T(0.333)S(0.333)S(0.333)PIPAQHAPRPYASSLEK;T(0.333)S(0.333)S(0.333)PIPAQHAPRPYASSLEK 77.468 0.002994 13160200 56154 80922 77452 90022 91615 78274 89562 69557 78694 71557 TRUE FALSE 60453.19342 76903.53115 80034.21102 82666.91463 88017.73477 81252.77192 77802.40182 78648.33872 85538.66187 69222.10095 0.873322141 1.110967886 1.15619448 1.194227183 1.271526486 1.173798119 1.123953199 1.136173818 1.235713171 1 16.07894511 -4.691381556 2.238426975 1.170575447 0.747261388 0.606032182 0.069071155 0.558797864 2.648393124 0.017642485 0.516476021 2.04E-05 4.691381556 -0.423314059 T(ph)SSPLFNK ddPTM_A459_MK2206_30min_R2 2 TSSPLFNK 8 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 T(0.984)S(0.008)S(0.008)PLFNK;T(0.655)S(0.002)S(0.342)PLFNK 157.99 0.0012178 28134000 436020 505560 474810 532680 465700 421290 536150 460870 439400 507880 TRUE FALSE 469402.0264 480454.6256 490639.9284 489158.34 447414.278 437322.4862 465752.861 521107.2914 477618.2177 491307.9172 0.955413113 0.97790939 0.998640387 0.995624786 0.910659614 0.890118948 0.947985662 1.060653153 0.972136212 1 18.90626796 -7.729416141 24.9992666 1.012296062 0.953923392 0.322619098 0.037942855 238.2391084 185983.6845 0.019689257 0.01136627 1.86E-08 7.729416141 -0.05837267 T(ph)SSPRSPPSSSEIFTPAHEENVR ddPTM_A459_MK2206_30min_R1 2 TSSPRSPPSSSEIFTPAHEENVR 23 1 I3L2L5;I3L3A7;I3L317;I3L4Q0;C9JLW8 I3L2L5 FAM195B Protein FAM195B 1 T(0.295)S(0.295)S(0.295)PRS(0.088)PPS(0.009)S(0.009)S(0.009)EIFTPAHEENVR;T(0.489)S(0.489)S(0.013)PRS(0.008)PPSSSEIFTPAHEENVR 135.26 3.23E-06 48798000 4115.2 3670 3894.8 3820.2 5057.4 3408.3 3628.6 4011.4 2243.42 1743.19 TRUE FALSE 3765.18063 3431.082333 3630.431828 4114.432466 4855.953049 3601.275001 3386.542715 3976.328753 2476.631537 1959.149538 1.921844432 1.751312121 1.853065199 2.100111496 2.478602555 1.838182809 1.728577962 2.029619831 1.264136039 1 10.9360118 -8.378676354 3.314638759 1.007191908 1.963923776 0.725678828 0.206662771 0.132054872 2.581195707 0.214932054 0.057672174 4.18E-09 8.378676354 0.956731868 T(ph)SSPRSPPSSSEIFTPAHEENVR ddPTM_A459_MK2206_30min_R2 2 TSSPRSPPSSSEIFTPAHEENVR 23 1 I3L2L5;I3L3A7;I3L317;I3L4Q0;C9JLW8 I3L2L5 FAM195B Protein FAM195B 1 T(0.311)S(0.311)S(0.189)PRS(0.189)PPSSSEIFTPAHEENVR;T(0.331)S(0.331)S(0.331)PRS(0.008)PPSSSEIFTPAHEENVR 131.98 4.08E-06 39123000 14322.3 58921 36304 64614 62156 55921 54657 41086 55972 38994 TRUE FALSE 15418.8263 55995.06882 37514.35724 59334.82951 59715.44313 58049.11284 47480.47025 46456.08127 60840.34339 37721.62897 0.408752928 1.484428704 0.994505228 1.572965726 1.583055789 1.53888139 1.258706783 1.231550241 1.612876884 1 15.20310436 -4.757495201 24.96326173 1.375330577 0.408751507 0.622493576 0.223039011 73.1750202 463069.3993 0.054316289 0.401389122 1.75E-05 4.757495201 -0.96657907 T(ph)SSTLDSEGTFNSYR ddPTM_A459_MK2206_30min_R1 1 TSSTLDSEGTFNSYR 15 0 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 T(0.862)S(0.135)S(0.002)TLDSEGTFNSYR 198.38 5.93E-05 7245400 1496.3 1498.6 1794.7 1141.9 991.87 903.89 1170.1 1022.8 1889 1508.9 TRUE FALSE 1369.031828 1401.040868 1672.880764 1229.849336 952.3617176 955.0674707 1092.044764 1013.857767 2085.36831 1695.833924 0.807291214 0.826166317 0.986464972 0.725218029 0.561589024 0.563184553 0.643957376 0.597852038 1.229700787 1 10.72777918 -10.4030601 7.334535452 1.000000001 0.756726625 0.101869447 0.199587314 4.97E-09 8.06E-10 0.198445896 0.0481302 3.95E-11 10.4030601 -0.243273377 T(ph)SSVSSISQVSPER ddPTM_A459_MK2206_30min_R2 1 TSSVSSISQVSPER 14 0 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 T(0.879)S(0.037)S(0.082)VS(0.001)SISQVSPER 92.269 0.037234 3975200 14942 13496 11821 14221 15567 13216 16519 11336 11376 11699 TRUE FALSE 16085.97101 12825.80827 12215.10624 13059.09881 14955.76136 13718.94414 14350.03546 12817.65412 12365.46392 11317.26259 1.42136589 1.133295986 1.079333995 1.153909676 1.321499899 1.212213999 1.2679776 1.132575481 1.092619688 1 13.46623742 -8.302561747 1.698020153 1.00766588 1.217392236 0.380884297 0.09386685 0.401361479 2.236756563 0.090966558 0.026969471 4.98E-09 8.302561747 0.209726356 T(ph)STGSASSSAAVAASSK ddPTM_A459_MK2206_30min_R2 1 TSTGSASSSAAVAASSK 17 0 Q9UDT6-2;Q9UDT6 Q9UDT6-2 CLIP2 CAP-Gly domain-containing linker protein 2 1 T(0.842)S(0.154)T(0.004)GSASSSAAVAASSK 176.44 2.19E-07 4129100 17761 22234 16946 23000 18049 17478 23559 15034 14795 19433 TRUE FALSE 19120.79582 21129.89189 17510.97118 21120.82643 17340.30557 18143.13754 20465.675 16998.99542 16081.84236 18798.9028 1.017122968 1.123996018 0.931489001 1.123513784 0.922410513 0.965116833 1.08866327 0.904254658 0.855467073 1 14.19836084 -6.674171288 0.591298375 0.933527563 1.057304307 0.19046903 0.080631289 1.446989863 1.106178001 0.064914097 0.081248688 2.12E-07 6.674171288 0.123776744 T(ph)STSAVPNLFVPLNTNPK ddPTM_A459_MK2206_30min_R2 1 TSTSAVPNLFVPLNTNPK 18 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2 P35611 ADD1 Alpha-adducin 1 T(0.857)S(0.122)T(0.018)S(0.004)AVPNLFVPLNTNPK 193.8 7.18E-21 0 10622 12341 11955 11403 9213.5 8055 13101 8571.3 5901.7 10402 TRUE FALSE 11435.22849 11728.16389 12353.57373 10471.33842 8851.731696 8361.538669 11380.82296 9691.59834 6415.019198 10062.58359 1.136410782 1.165522132 1.227674148 1.040621261 0.879667892 0.830953462 1.131004067 0.963132207 0.63751214 1 13.29671315 -6.002369016 3.749808535 0.913960682 1.174031302 0.499157115 0.121025568 0.199064916 6.182491265 0.036881586 0.053268519 9.95E-07 6.002369016 0.26007062 T(ph)STSSSSVQAR ddPTM_A459_MK2206_30min_R1 1 TSTSSSSVQAR 11 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.978)S(0.021)TSSSSVQAR 120.03 0.011336 1643000 1429.9 1306.6 1039 898.61 1357.9 1167.2 1543.6 1001.6 569.74 1024.4 TRUE FALSE 1308.279496 1221.540103 968.4755748 967.8210979 1303.811968 1233.285855 1440.62926 992.8431168 628.9665118 1151.310406 1.136339505 1.060999793 0.841194147 0.840625684 1.132459119 1.071201866 1.251295266 0.862359197 0.546304896 1 10.16906114 -7.99216245 24.84232641 0.750212287 1.037945789 0.343556693 0.15728576 168.3322339 533554.9791 0.08776418 0.042035468 1.02E-08 7.99216245 0.287733502 T(ph)STSSSSVQAR ddPTM_A459_MK2206_30min_R2 2 TSTSSSSVQAR 11 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.898)S(0.003)T(0.001)S(0.09)S(0.004)S(0.004)SVQAR;T(0.996)S(0.004)TSSSSVQAR 134.38 0.0038354 6597500 24686.4 25514.3 21160.9 22756.1 22469.4 19888.2 22127.7 18898.7 15565.2 23164.3 TRUE FALSE 26576.40976 24247.29696 21866.39384 20896.85384 21587.13846 20645.05939 19222.30641 21368.82498 16919.03296 22408.45079 1.185999426 1.082060388 0.975810155 0.932543442 0.963348098 0.921306858 0.857815053 0.953605637 0.755029124 1 14.45175529 -3.721391424 0.561281255 0.89168352 2.031473426 0.684377924 0.062181835 6.201634827 0.601018177 0.029508237 5.999709034 0.000189937 3.721391424 1.139789907 T(ph)SVAGTVR ddPTM_A459_MK2206_30min_R1 1 TSVAGTVR 8 0 Q96EB6;B0QZ35;E9PC49 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 T(0.99)S(0.01)VAGTVR 145.46 0.0046514 8221800 3959.9 4369.6 3947.1 3460.2 3797.4 3855.6 3670.5 3917.4 3411.4 3054.3 TRUE FALSE 3623.089711 4085.138246 3679.181849 3726.705204 3646.141517 4073.90074 3425.647642 3883.150585 3766.027238 3432.689743 1.055466699 1.190069174 1.071807278 1.085651627 1.062182076 1.1867955 0.997948518 1.131226786 1.097106794 1 11.74512375 -14.52287875 0.29156974 0.225293036 1.104309178 0.213067921 0.05608766 381.9458792 3.586310171 180.1621797 0.056272285 3.00E-15 14.52287875 0.879016142 T(ph)SVQTEDDQLIAGQSAR ddPTM_A459_MK2206_30min_R1 2 TSVQTEDDQLIAGQSAR 17 0 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-3;P26232-2;P26232-5;P26232;P26232-6 G3XAM7;P26232-6 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 T(0.94)S(0.06)VQTEDDQLIAGQSAR;T(0.862)S(0.138)VQTEDDQLIAGQSAR 308.24 1.27E-102 16482000 3411.7 4102.2 3433.7 2592.9 3224.1 3291.1 3549.1 2971.44 3661.8 3655.2 TRUE FALSE 3121.516999 3835.146034 3200.630011 2792.605607 3095.67727 3477.439238 3312.346015 2945.461013 4042.457214 4108.033771 0.759856704 0.933572178 0.779114825 0.679791297 0.753566656 0.846497237 0.806309344 0.717000195 0.984036996 1 12.00423233 -8.276376129 23.53302488 0.992018681 0.787532566 0.610875174 0.066225276 298.0102803 469509.0657 0.065832892 0.017338749 5.29E-09 8.276376129 -0.204486116 T(ph)SVQTEDDQLIAGQSAR ddPTM_A459_MK2206_30min_R2 2 TSVQTEDDQLIAGQSAR 17 0 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-3;P26232-2;P26232-5;P26232;P26232-6 G3XAM7;P26232-6 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 T(0.647)S(0.353)VQTEDDQLIAGQSAR;T(0.986)S(0.014)VQTEDDQLIAGQSAR 310.98 8.83E-103 29167000 44829 52168 53200 56376 46752 50860 56956 44731 50281 62445 TRUE FALSE 48261.14271 49577.41298 54973.66145 51769.90046 44916.28157 52795.51294 49477.60878 50577.49528 54654.35049 60407.42476 0.798927332 0.820717208 0.910048089 0.857012208 0.743555643 0.87399046 0.819065023 0.837272827 0.904762133 1 15.88243826 -8.565910827 2.147270386 0.99969066 0.832964363 0.607299363 0.042139012 0.246344365 2.623414275 0.041268003 0.011399809 2.72E-09 8.565910827 -0.166726297 T(ph)T(ph)GITTPVASVAFPK ddPTM_A459_MK2206_30min_R1 1 TTGITTPVASVAFPK 15 0 Q8IWI9;H3BU53 Q8IWI9 MGA MAX gene-associated protein 2 T(1)T(1)GITTPVASVAFPK 138.11 0.0032739 2842800 820.83 907.51 1192.3 832.63 827.62 967.43 1095.8 944.63 864.26 861.84 TRUE FALSE 751.0140982 848.4309341 1111.369998 896.7593069 794.6541429 1022.205051 1022.701181 936.3711995 954.1029198 968.6112458 0.775351413 0.875925133 1.147384983 0.925819632 0.820405654 1.055330562 1.055842771 0.966715185 0.985021518 1 9.919773943 -6.787773716 24.99635627 1.013205503 0.921321586 0.221935817 0.095603148 429.5079432 407682.5406 0.036067539 0.031818002 1.63E-07 6.787773716 -0.091883917 T(ph)TAGSVDWTDQLGLR ddPTM_A459_MK2206_30min_R2 1 TTAGSVDWTDQLGLR 15 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 T(0.781)T(0.002)AGS(0.216)VDWTDQLGLR 89.624 0.038363 3272000 6481.5 7138.9 6547.6 5646.8 6486.7 6347.3 8826 5351.4 6428 5551.5 TRUE FALSE 6977.728623 6784.392607 6765.893716 5185.438377 6231.999565 6588.850949 7667.135598 6050.846354 6987.095821 5370.35501 1.299304908 1.263304306 1.259859675 0.965567149 1.160444617 1.226892996 1.427677609 1.126712544 1.30104915 1 12.39080175 -11.83189112 2.11982736 9.99E-05 1.2212617 0.250800682 0.116778159 3091569.556 285877.4142 14913357.66 0.031752237 1.47E-12 11.83189112 1.221161818 T(ph)TFSPPVVAATVK ddPTM_A459_MK2206_30min_R1 1 TTFSPPVVAATVK 13 0 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 T(0.622)T(0.083)FS(0.296)PPVVAATVK 107.93 0.015086 6124500 3610.5 4137.7 4169.8 3679.6 3924.4 2852.7 3759.9 3863.7 2863.6 2976.5 TRUE FALSE 3303.408016 3868.334978 3886.765594 3963.00343 3768.082838 3014.217409 3509.083931 3829.920078 3161.281467 3345.251291 0.987491739 1.156366037 1.161875523 1.184665391 1.126397544 0.901043643 1.048974688 1.144882625 0.945005679 1 11.70789887 -6.576570592 24.99716494 1.018945197 1.131281636 0.344681092 0.078472497 114.4616152 53288.71845 0.026210561 0.026210563 2.65E-07 6.576570592 0.112336438 T(ph)TGTPPDSSLVTYELHSRPEQDK ddPTM_A459_MK2206_30min_R1 1 TTGTPPDSSLVTYELHSRPEQDK 23 1 Q13561;Q13561-3;Q13561-2;H0YI98;F8VW18;F8W1I6 Q13561 DCTN2 Dynactin subunit 2 1 T(0.355)T(0.355)GT(0.286)PPDS(0.002)S(0.002)LVTYELHSRPEQDK 61.957 0.0047341 9606500 4802.7 5292.8 5487.4 4487.7 4261.1 4482.5 5080.7 4117.1 5377.7 5376.8 TRUE FALSE 4394.205145 4948.237758 5114.930577 4833.343432 4091.371364 4736.295276 4741.775773 4081.104629 5936.731159 6042.918577 0.727166036 0.818848987 0.846433807 0.799835935 0.677052208 0.78377612 0.784683049 0.675353238 0.982427793 1 12.56102979 -8.279665671 23.4952065 0.991214137 0.768335949 0.739731453 0.053829899 222.8773849 287301.7759 0.053105876 0.013851214 5.25E-09 8.279665671 -0.222878188 T(ph)TGTPPDSSLVTYELHSRPEQDK ddPTM_A459_MK2206_30min_R2 2 TTGTPPDSSLVTYELHSRPEQDK 23 1 Q13561;Q13561-3;Q13561-2;H0YI98;F8VW18;F8W1I6 Q13561 DCTN2 Dynactin subunit 2 1 T(0.332)T(0.332)GT(0.332)PPDS(0.003)S(0.001)LVTYELHSRPEQDK;T(0.458)T(0.458)GT(0.082)PPDS(0.002)SLVTYELHSRPEQDK 77.584 0.0004332 27847000 176743 192097 181935 178135 176565 139743 205140 159284 123182 212930 TRUE FALSE 190274.58 182557.7423 188000.6221 163580.8007 169632.1709 145061.0178 178204.8716 180102.9657 133896.1477 205982.1115 0.923743225 0.886279595 0.912703636 0.794150518 0.823528653 0.704240852 0.865147319 0.874362168 0.650037747 1 17.65215953 -5.758926472 24.95665827 0.808403361 0.905445917 0.174704756 0.090219702 102.9017834 1021932.175 0.023535302 0.038469244 1.74E-06 5.758926472 0.097042557 T(ph)THSPYEER ddPTM_A459_MK2206_30min_R1 1 TTHSPYEER 9 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 T(0.504)T(0.361)HS(0.135)PYEER 114.89 0.019503 1860300 1119.7 1088.5 1228.5 1029.1 1358.3 1289.2 1302.2 1067.1 600.46 859.16 TRUE FALSE 1024.463635 1017.638452 1145.112843 1108.36146 1304.196035 1362.19339 1215.332614 1057.770457 662.8799658 965.5992271 1.060961532 1.053893193 1.18590903 1.14784833 1.350659775 1.410723364 1.258630475 1.095454954 0.686495957 1 9.915280711 -8.061770702 5.156965293 0.848154191 1.211934939 0.561878811 0.127765245 0.168396784 8.96151494 0.096412997 0.035838337 8.67E-09 8.061770702 0.363780748 T(ph)THSPYEER ddPTM_A459_MK2206_30min_R2 2 TTHSPYEER 9 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 T(0.931)T(0.063)HS(0.006)PYEER;T(0.995)T(0.005)HSPYEER 157.75 0.0020169 89832000 54227 63305 63160 82006 63780 62276 70159 57355 57648 65887 TRUE FALSE 58378.66081 60161.36575 65265.72288 75305.84748 61275.67673 64645.95682 60947.03902 64851.49543 62662.11884 63737.11259 0.915928859 0.943898512 1.023983049 1.181507044 0.961381435 1.014259263 0.956225291 1.01748405 0.983133943 1 15.95984604 -5.178762978 4.318028334 1.019408891 0.923995693 0.258823558 0.059606202 0.312303455 10.55722489 0.01611566 0.046956855 6.63E-06 5.178762978 -0.095413198 T(ph)TIFSPEGR ddPTM_A459_MK2206_30min_R1 2 TTIFSPEGR 9 0 H0YLS6;H0YLC2;H0YMI6;H0YMA1;H0YMZ1;H0YL69;P25789 H0YLS6 PSMA4 Proteasome subunit alpha type;Proteasome subunit alpha type-4 1 T(0.996)T(0.003)IFS(0.001)PEGR;T(0.913)T(0.054)IFS(0.033)PEGR 161.51 4.71E-06 12098000 7542.2 6294.9 6361.4 5200.2 6620.3 6351.5 7010.5 6140.2 4952.3 4879.4 TRUE FALSE 6900.696284 5885.100866 5929.605892 5600.720305 6356.599432 6711.116441 6542.842336 6086.516879 5467.109307 5483.89691 1.258356311 1.073160375 1.081275959 1.021302989 1.159139119 1.223786032 1.1931009 1.109889004 0.996938746 1 12.42098574 -8.203859955 3.993644455 0.995989972 1.138657989 0.412812228 0.068186502 0.240518099 7.541428344 0.058869265 0.019082578 6.25E-09 8.203859955 0.142668017 T(ph)TKSPSDSGYSYETIGK ddPTM_A459_MK2206_30min_R1 2 TTKSPSDSGYSYETIGK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.569)T(0.026)KS(0.338)PS(0.067)DSGYSYETIGK;T(0.376)T(0.102)KS(0.326)PS(0.195)DS(0.001)GYSYETIGK 116.04 0.0022668 800945000 10371 10857 11489.7 10658.1 9928.4 8523.4 9536.6 10383.5 9362.2 7050.6 TRUE FALSE 9488.89199 10150.20733 10709.81118 11478.98871 9532.930804 9005.987542 8900.430815 10292.71815 10335.43419 7924.081557 1.197475306 1.280931708 1.351552366 1.448620717 1.203032899 1.136533929 1.123212924 1.298916231 1.304306893 1 12.95202801 -6.487176586 23.53880799 1.186144749 1.319992446 0.321416813 0.100910191 401.5868323 264770.1246 0.032401223 0.036719189 3.26E-07 6.487176586 0.133847697 T(ph)TKSPSDSGYSYETIGK ddPTM_A459_MK2206_30min_R2 1 TTKSPSDSGYSYETIGK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.48)T(0.48)KS(0.025)PS(0.015)DSGYSYETIGK 84.195 0.017219 523350000 87011 121130 102360 124800 122940 98431 134180 101180 95199 117730 TRUE FALSE 93672.62906 115114.8603 105772.6313 114603.4408 118112.7579 102176.8607 116562.0048 114404.5734 103479.2369 113888.4797 0.822494332 1.010768259 0.928738636 1.006277729 1.037091356 0.897165902 1.023474939 1.00453157 0.908601442 1 16.79726229 -4.754449676 24.98409609 0.979600928 0.822494059 0.49829107 0.047301408 198.6106751 709854.4313 0.011260946 0.109388031 1.76E-05 4.754449676 -0.157106869 T(ph)TKTPEDGDYSYEIIEK ddPTM_A459_MK2206_30min_R1 2 TTKTPEDGDYSYEIIEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.804)T(0.174)KT(0.021)PEDGDYSYEIIEK;T(0.778)T(0.149)KT(0.073)PEDGDYSYEIIEK 140.56 0.00069713 236263000 12887.7 14156 14445 12307.1 10838.4 8240.4 9872.2 11429.4 12212.9 10158.3 TRUE FALSE 11791.53344 13234.44183 13464.51365 13254.99497 10406.68358 8706.964327 9213.643551 11329.47396 13482.47466 11416.7869 1.032824169 1.159208974 1.179361038 1.161009231 0.911524729 0.762645778 0.807025973 0.992352232 1.180934249 1 13.47886906 -6.262757136 24.84698975 0.926273638 1.138270024 0.397710795 0.113854474 113.4702411 2139544.5 0.037798128 0.04525623 5.46E-07 6.262757136 0.211996386 T(ph)TKTPEDGDYSYEIIEK ddPTM_A459_MK2206_30min_R2 2 TTKTPEDGDYSYEIIEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.353)T(0.353)KT(0.293)PEDGDYSYEIIEK;T(0.351)T(0.351)KT(0.298)PEDGDYSYEIIEK 83.418 0.018406 42428000 103866 105230 105707 99919 108723 71740 136041 102754 80858 121684 TRUE FALSE 111818.0608 100004.4312 109231.2186 91755.29807 104453.9887 74470.11597 118178.6533 116184.3006 87890.88268 117713.461 0.949917366 0.849558159 0.927941611 0.77948008 0.887358063 0.632638912 1.003951904 0.987009468 0.746651079 1 16.84491978 -9.953338322 6.886274286 1 0.863572298 0.122561506 0.110171007 144664283.2 0 0.105055357 0.026263839 1.11E-10 9.953338322 -0.136427702 T(ph)TNNEKSPIIKPLIPK ddPTM_A459_MK2206_30min_R2 1 TTNNEKSPIIKPLIPK 16 2 O75717;O75717-2 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 T(0.802)T(0.124)NNEKS(0.074)PIIKPLIPK 89.846 0.02002 0 28963 23106 22035 22144 20894 13342 26462 17544 11763 23134 TRUE FALSE 31180.42955 21958.58964 22769.6359 20334.76436 20073.59658 13849.73916 22987.50761 19837.06104 12786.12448 22379.13947 1.393280988 0.981207953 1.017449126 0.908648181 0.896978036 0.618868262 1.027184608 0.886408571 0.571341203 1 14.44986694 -1.522878977 0.682244444 0.830860787 60.60502523 0.561639449 0.143251307 191.1136208 1.088753526 0.056335924 17369.86713 0.029999984 1.522878977 59.77416444 T(ph)TPAPVNQTDR ddPTM_A459_MK2206_30min_R1 1 TTPAPVNQTDR 11 0 A0A0A0MRJ3;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-6;Q8NEY1-5;H0Y6F6 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 T(0.922)T(0.078)PAPVNQTDR 115.57 0.014355 1824900 1930.2 2185.1 1916 2095 2042.9 1838.5 2088.7 1640.4 1707.1 1869.8 TRUE FALSE 1766.026354 2042.849593 1785.947258 2256.357263 1961.526967 1942.594281 1949.366634 1626.058156 1884.559154 2101.44494 0.840386688 0.972116639 0.849866311 1.07371705 0.933418206 0.924408841 0.927631553 0.773780994 0.896792068 1 11.03716594 -7.556091165 24.99984421 0.871313144 0.935954245 0.03747615 0.079807475 408.9047432 307788.757 0.035933244 0.020746195 2.78E-08 7.556091165 0.064641101 T(ph)TPDQELVPASEPVWERPWSVEEIR ddPTM_A459_MK2206_30min_R1 2 TTPDQELVPASEPVWERPWSVEEIR 25 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;A0A0A0MT65 A0A0A0MR88 FAM21C WASH complex subunit FAM21C 1 T(0.779)T(0.221)PDQELVPASEPVWERPWSVEEIR;T(0.747)T(0.249)PDQELVPAS(0.004)EPVWERPWSVEEIR 121.59 1.07E-07 55246000 592.68 680.24 566.23 534.4 715.65 557.8 764.55 707.98 895.3 884.78 TRUE FALSE 542.2694537 635.9562524 527.7958852 575.5595806 687.1441451 589.382154 713.5482645 701.7902055 988.3696389 994.3932261 0.545326979 0.63954202 0.530771803 0.578804808 0.69101853 0.592705319 0.717571526 0.70574717 0.993942449 1 9.957672658 -8.100642331 1.24336179 1.024084292 0.59821228 0.879653898 0.055855644 0.13752392 0.392433675 0.049887414 0.016633555 7.93E-09 8.100642331 -0.425872012 T(ph)TPDQELVPASEPVWERPWSVEEIR ddPTM_A459_MK2206_30min_R2 3 TTPDQELVPASEPVWERPWSVEEIR 25 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;A0A0A0MT65 A0A0A0MR88 FAM21C WASH complex subunit FAM21C 1 T(0.499)T(0.499)PDQELVPAS(0.002)EPVWERPWSVEEIR;T(0.5)T(0.5)PDQELVPAS(0.001)EPVWERPWSVEEIR;T(0.661)T(0.337)PDQELVPAS(0.002)EPVWERPWSVEEIR 71.556 0.011514 21547600 6956.8 6660.8 9751.65 7002.7 7832.7 6634.72 10560 4418.09 5009.22 8405.15 TRUE FALSE 7489.417957 6330.034358 10076.76514 6430.557009 7525.148842 6887.208919 9173.459315 4995.549533 5444.912901 8130.890644 0.921106713 0.778516725 1.23931874 0.790879781 0.925501175 0.847042375 1.128223182 0.61439143 0.669657623 1 12.98919768 -7.773463509 24.99956653 0.731518429 0.941270204 0.203803232 0.164940119 318.5878091 662370.9502 0.085210715 0.041429648 1.68E-08 7.773463509 0.209751775 T(ph)TPDQELVPASEPVWERPWSVEEIRR ddPTM_A459_MK2206_30min_R1 1 TTPDQELVPASEPVWERPWSVEEIRR 26 2 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;A0A0A0MT65 A0A0A0MR88 FAM21C WASH complex subunit FAM21C 1 T(0.5)T(0.5)PDQELVPASEPVWERPWSVEEIRR 64.749 0.002264 9235300 632.04 793.3 666.8 482.26 690.41 653.58 470.87 535.16 436.14 391.23 TRUE FALSE 578.281679 741.6560258 621.5394738 519.4037488 662.9095077 690.5851348 439.4591215 530.4811525 481.4783137 439.698526 1.315177661 1.686737576 1.413558238 1.181272436 1.507645508 1.570587787 0.999455526 1.206465615 1.095019167 1 8.780370886 -7.264542812 24.99883215 1.092440535 1.446097792 0.626591759 0.139901621 198.4462178 1598516.316 0.058504476 0.041317534 5.44E-08 7.264542812 0.353657257 T(ph)TPDQELVPASEPVWERPWSVEEIRR ddPTM_A459_MK2206_30min_R2 1 TTPDQELVPASEPVWERPWSVEEIRR 26 2 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;A0A0A0MT65 A0A0A0MR88 FAM21C WASH complex subunit FAM21C 1 T(0.799)T(0.201)PDQELVPASEPVWERPWSVEEIRR 53.355 0.019921 1925900 5889 7270.7 5412.8 6078.3 4777.1 6453.2 6987.1 5395.6 7425.4 6722 TRUE FALSE 6339.866368 6909.647611 5593.26005 5581.683446 4589.527051 6698.781048 6069.685377 6100.823446 8071.24787 6502.661691 0.974964817 1.062587589 0.860149323 0.858369036 0.705792069 1.030159859 0.933415525 0.938204036 1.241222172 1 12.66681465 -8.138979712 6.980237895 1.118886357 0.916676098 0.352610378 0.108683257 0.27003496 13.94898645 0.0766571 0.028572972 7.26E-09 8.138979712 -0.20221026 T(ph)TPESPPYSSGSYDSIK ddPTM_A459_MK2206_30min_R2 1 TTPESPPYSSGSYDSIK 17 0 A0A087WTU5;A0A087X0N3;Q96MY1-2;Q96MY1 A0A087WTU5 NOL4L Nucleolar protein 4-like 1 T(0.393)T(0.264)PES(0.343)PPYSSGSYDSIK 169.02 2.52E-06 58929000 19741 22042 20358 22014 20314 18556 23054 16649 16545 19723 TRUE FALSE 21252.38614 20947.42633 21036.72556 20215.38578 19516.37029 19262.16158 20026.98211 18825.08146 17984.05419 19079.44013 1.113889401 1.097905714 1.102586104 1.059537683 1.022900576 1.009576877 1.049662987 0.986668442 0.942588151 1 14.21973122 -6.181737241 0.542094517 0.978333799 1.132216615 0.812284889 0.023062573 0.533052343 0.305049891 0.018656592 0.043425467 6.58E-07 6.181737241 0.153882817 T(ph)TPNSGDVQVTEDAVR ddPTM_A459_MK2206_30min_R1 4 TTPNSGDVQVTEDAVR 16 0 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 T(0.978)T(0.022)PNSGDVQVTEDAVR;T(0.979)T(0.021)PNSGDVQVTEDAVR;T(0.594)T(0.406)PNSGDVQVTEDAVR;T(0.854)T(0.146)PNSGDVQVTEDAVR 248.01 6.61E-29 40372200 10548.1 11938.8 12298.4 8720.6 8119.1 6813.61 9364.5 7580 10028.6 11395.3 TRUE FALSE 9650.928705 11161.58195 11463.61887 9392.262123 7795.699055 7199.39071 8739.811291 7513.728859 11071.10886 12807.03579 0.753564592 0.87151954 0.895103212 0.733367367 0.608704401 0.562143405 0.682422649 0.586687582 0.864455213 1 13.64464898 -5.924031306 5.543652644 0.685817423 0.841740508 0.123935565 0.13166041 0.302503812 16.19491675 0.035935389 0.053864517 1.19E-06 5.924031306 0.155923084 T(ph)TPNSGDVQVTEDAVR ddPTM_A459_MK2206_30min_R2 3 TTPNSGDVQVTEDAVR 16 0 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 T(0.5)T(0.5)PNS(0.001)GDVQVTEDAVR;T(0.979)T(0.021)PNSGDVQVTEDAVR;T(0.643)T(0.357)PNSGDVQVTEDAVR 165.58 4.18E-05 58571000 118192 87206 99766 100147 84877 67615 81961 65674 47079.1 77004 TRUE FALSE 127240.8704 82875.47685 103092.1486 91964.66975 81544.30251 70188.13621 71199.42225 74257.81729 51173.95502 74491.36579 1.708129111 1.112551448 1.383947623 1.234568178 1.094681265 0.942231834 0.955807717 0.996864758 0.686978343 1 16.18478559 -4.177509349 0.345322021 0.852951706 2.443370019 0.705551618 0.144007722 5.656353283 0.392233989 0.13214829 4.065161994 6.64E-05 4.177509349 1.590418313 T(ph)TPNSGDVQVTEDAVRR ddPTM_A459_MK2206_30min_R1 1 TTPNSGDVQVTEDAVRR 17 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 T(0.831)T(0.169)PNS(0.001)GDVQVTEDAVRR 85.177 0.014813 7857200 2044.6 1329.9 1510.8 1507.3 3038.3 3544.2 2709.9 2153.9 985.93 1090.5 TRUE FALSE 1870.696033 1243.323268 1408.251105 1623.392507 2917.278077 3744.869541 2529.127515 2135.068679 1088.420952 1225.599373 1.526351983 1.01446141 1.149030537 1.324570282 2.380286855 3.055541333 2.063584212 1.742060845 0.88807238 1 10.25927175 -6.123935572 6.47174714 1.960674122 1.213620678 0.180676868 0.604147274 0.372030691 18.08414617 0.190334022 0.24731141 7.52E-07 6.123935572 -0.747053445 T(ph)TPPEAAQNGQSPMAALILVADNAGGSHASK ddPTM_A459_MK2206_30min_R1 2 TTPPEAAQNGQSPMAALILVADNAGGSHASK 31 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 T(0.5)T(0.5)PPEAAQNGQSPMAALILVADNAGGSHASK;T(0.5)T(0.5)PPEAAQNGQSPMAALILVADNAGGSHASK 145.29 1.43E-19 17764100 2594.2 1437.21 1927.14 1220.98 2737.8 2854.4 3547.6 2290.4 2267.4 2257.7 TRUE FALSE 2373.549667 1343.647368 1796.331106 1315.020091 2628.747629 3016.013661 3310.946077 2270.375274 2503.104344 2537.400921 0.935425556 0.52953688 0.707941379 0.518254754 1.036000108 1.188623223 1.304857285 0.894764109 0.98648358 1 11.30913577 -6.343023499 6.25551163 1.084355191 0.665963566 0.621750385 0.151061158 0.154461064 9.643185142 0.047983074 0.054558369 4.54E-07 6.343023499 -0.418391624 T(ph)TPPEAAQNGQSPMAALILVADNAGGSHASK ddPTM_A459_MK2206_30min_R2 2 TTPPEAAQNGQSPMAALILVADNAGGSHASK 31 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 T(0.5)T(0.5)PPEAAQNGQSPMAALILVADNAGGSHASK;T(0.5)T(0.5)PPEAAQNGQSPMAALILVADNAGGSHASK 164.01 5.70E-32 8555000 21492.3 36663 23442 47032 42421 47867 48442 29959 34281 28421 TRUE FALSE 23137.76701 34842.36873 24223.54458 43189.33515 40755.33839 49688.61223 42081.50721 33874.74416 37262.69941 27493.6251 0.841568434 1.267289003 0.881060409 1.570885432 1.482355937 1.80727758 1.530591439 1.232094496 1.355321435 1 14.74680952 -5.76381102 24.99940239 1.457829121 1.023704226 0.417916387 0.229067198 58.31908945 614751.274 0.063819679 0.099951847 1.72E-06 5.76381102 -0.434124895 T(ph)TPPPGRPPAPSSEEEDGEAVAH ddPTM_A459_MK2206_30min_R1 1 TTPPPGRPPAPSSEEEDGEAVAH 23 1 Q96KN1 Q96KN1 FAM84B Protein FAM84B 1 T(0.499)T(0.499)PPPGRPPAPS(0.001)S(0.001)EEEDGEAVAH 79.332 0.00088873 4990000 1860.1 1631.7 1291.7 1135.3 1490.6 1273 1529.5 1357.6 1049.3 1226.7 TRUE FALSE 1701.888727 1525.476033 1204.023003 1222.741003 1431.226246 1345.07616 1427.469846 1345.730646 1158.37849 1378.672857 1.234439859 1.106481516 0.873320307 0.886897132 1.038118824 0.975631132 1.035394175 0.976105854 0.840212734 1 10.42906445 -5.015318592 3.893739749 0.957192625 1.219534891 0.664582584 0.064603748 0.127359396 4.286698493 0.017398106 0.06800214 9.65E-06 5.015318592 0.262342266 T(ph)TPTLGLEEVLSSR ddPTM_A459_MK2206_30min_R2 1 TTPTLGLEEVLSSR 14 0 O43474-4;O43474-1;O43474 O43474-4 KLF4 Krueppel-like factor 4 1 T(0.891)T(0.108)PT(0.001)LGLEEVLSSR 116.63 0.0063731 0 5258.5 7474.4 7996.4 8060 6811.1 5511.3 7070.2 4556.7 5729.8 5030 TRUE FALSE 5661.094803 7103.232165 8262.995985 7401.472217 6543.661991 5721.036383 6141.874247 5152.276335 6228.167647 4865.871512 1.163428748 1.459806768 1.698153345 1.521098985 1.344807806 1.175747524 1.262235189 1.058859923 1.279969607 1 12.24848251 -6.607807904 2.730229259 1.162262729 1.476147265 0.495792647 0.145330512 0.240858469 3.64062544 0.053491642 0.054229002 2.47E-07 6.607807904 0.313884536 T(ph)TPTMSEEPPLDLTGK ddPTM_A459_MK2206_30min_R1 2 TTPTMSEEPPLDLTGK 16 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.637)T(0.358)PT(0.005)MSEEPPLDLTGK;T(0.776)T(0.224)PTMSEEPPLDLTGK 249.41 5.51E-29 64142000 10146 10546.7 10788.5 8751.6 8964.5 7502.1 8799.6 9256.6 8683.9 7859.5 TRUE FALSE 9283.029421 9860.107913 10056.20668 9425.649748 8607.424982 7926.862419 8212.59474 9175.670522 9586.622481 8833.194196 1.050925545 1.116256214 1.138456424 1.067071496 0.974440818 0.897394786 0.929742351 1.038771516 1.085295112 1 13.10871951 -6.133588786 3.897270437 0.982336859 1.103201531 0.48958989 0.053354038 0.215464852 5.697527337 0.018020742 0.023934066 7.35E-07 6.133588786 0.120864672 T(ph)TPTMSEEPPLDLTGK ddPTM_A459_MK2206_30min_R2 2 TTPTMSEEPPLDLTGK 16 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.881)T(0.119)PTMSEEPPLDLTGK;T(0.584)T(0.416)PTMSEEPPLDLTGK 335.25 9.81E-135 17430000 231760 248098 256974 253170 251404 193662 286444 217493 191169 260722 TRUE FALSE 249503.7238 235777.8141 265541.3849 232485.2011 241532.6158 201031.9431 248833.5587 245920.0819 207796.5341 252214.6625 0.989251463 0.934829925 1.052838809 0.921775121 0.957647003 0.797066836 0.986594341 0.975042765 0.823887604 1 17.94429262 -5.925997871 24.96058574 0.920856108 0.986684541 0.175203708 0.06831807 71.77736589 24207.80648 0.018807926 0.02789666 1.19E-06 5.925997871 0.065828433 T(ph)TPTQPSEQK ddPTM_A459_MK2206_30min_R1 5 TTPTQPSEQK 10 0 O95104-2;O95104-3;O95104 O95104-2 SCAF4 "Splicing factor, arginine/serine-rich 15" 1 T(0.862)T(0.138)PTQPSEQK;T(0.799)T(0.201)PTQPSEQK;T(0.985)T(0.015)PTQPSEQK;T(0.949)T(0.051)PTQPSEQK;T(0.984)T(0.016)PTQPSEQK 190.26 0.00042224 86855500 24411.1 25890.7 25394.7 20922.73 18253.53 16460.78 21085.1 20121.2 18231.69 20577 TRUE FALSE 22334.80776 24205.21072 23670.97852 22534.20229 17526.45325 17392.77514 19678.55145 19945.28247 20126.93942 23126.23411 0.965777984 1.046655958 1.023555258 0.97439999 0.757860236 0.75207987 0.850918976 0.862452675 0.870307691 1 14.49724274 -6.103171284 5.458596976 0.83785918 1.013086059 0.55541713 0.067452214 0.158069381 6.839008976 0.020101894 0.026328047 7.89E-07 6.103171284 0.175226878 T(ph)TPTQPSEQK ddPTM_A459_MK2206_30min_R2 3 TTPTQPSEQK 10 0 O95104-2;O95104-3;O95104 O95104-2 SCAF4 "Splicing factor, arginine/serine-rich 15" 1 T(0.999)T(0.001)PTQPSEQK;T(0.988)T(0.012)PTQPSEQK;T(0.989)T(0.011)PTQPSEQK 172.21 0.00035325 145330000 275419 283132 260927 263615 247446 166681 299084 229549 198617 267384 TRUE FALSE 296505.2904 269072.0766 269626.1759 242076.8112 237730.0267 173024.1623 259813.9115 259551.8425 215892.3476 258659.282 1.146316065 1.040256799 1.042398996 0.93589068 0.919085621 0.668926941 1.004463902 1.003450719 0.834659193 1 17.98069344 -5.621363194 1.624161755 0.89925142 1.10416631 0.393853422 0.097271438 0.428977359 2.232817874 0.031376193 0.082095512 2.39E-06 5.621363194 0.20491489 T(ph)TPVDLCLLEESVGSLEGSR ddPTM_A459_MK2206_30min_R2 4 TTPVDLCLLEESVGSLEGSR 20 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 T(0.5)T(0.5)PVDLCLLEESVGSLEGSR;T(0.828)T(0.172)PVDLCLLEESVGSLEGSR;T(0.861)T(0.139)PVDLCLLEESVGSLEGSR;T(0.827)T(0.173)PVDLCLLEESVGSLEGSR 239.93 1.04E-29 122192000 177771 251420 240228 247400 215691 224995 263969 214723 210629 233663 TRUE FALSE 191381.2844 238934.8484 248237.0816 227186.6286 207221.8876 233557.3424 229309.5532 242788.0334 228949.1297 226038.5954 0.846675251 1.057053323 1.098206619 1.005078925 0.916754447 1.033263111 1.014470793 1.074099903 1.012876271 1 17.7862096 T(ph)TRTPDTSTYCYETAEK ddPTM_A459_MK2206_30min_R1 3 TTRTPDTSTYCYETAEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.495)T(0.495)RT(0.009)PDTSTYCYETAEK;T(0.381)T(0.381)RT(0.238)PDTSTYCYETAEK;T(0.806)T(0.137)RT(0.057)PDTSTYCYETAEK 199.05 6.73E-07 245111600 10559.9 11680.8 10957 11270.5 10631.5 9154.9 9240.7 10061.1 6764.2 4394.53 TRUE FALSE 9661.725053 10920.3778 10213.26937 12138.55586 10208.02484 9673.242526 8624.269764 9973.136863 7467.362796 4938.957553 1.956227594 2.211069376 2.067899806 2.457716174 2.066837937 1.958559559 1.746172076 2.019279728 1.511930952 1 12.26999085 -8.6210097 0.544380917 0.969226901 2.172703949 0.82244003 0.161499322 0.431728733 0.296037851 0.187625692 0.081761986 2.39E-09 8.6210097 1.203477048 T(ph)TRTPDTSTYCYETAEK ddPTM_A459_MK2206_30min_R2 2 TTRTPDTSTYCYETAEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.487)T(0.082)RT(0.43)PDT(0.001)STYCYETAEK;T(0.378)T(0.378)RT(0.244)PDT(0.001)STYCYETAEK 116.35 0.016847 229683000 96290.3 186231 146659 171585 209829 139941 187128 143697 155026 150037 TRUE FALSE 103662.3594 176983.0393 151548.5379 157565.9566 201590.0592 145266.5528 162557.8688 162478.6913 168509.8813 145141.305 0.714216807 1.219384374 1.044144793 1.08560383 1.388922741 1.000862937 1.119997294 1.119451774 1.161005692 1 17.14709862 -4.75390846 24.99952302 1.130534494 0.714216069 0.562033895 0.109159106 196.554295 652424.5283 0.026197816 0.269963599 1.76E-05 4.75390846 -0.416318425 T(ph)TRTPEEGGYSYDISEK ddPTM_A459_MK2206_30min_R1 1 TTRTPEEGGYSYDISEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.464)T(0.464)RT(0.072)PEEGGYSYDISEK 87.208 0.014887 61631000 3998.9 3827.2 3565.8 3988.3 3996.2 3148.3 3727.1 3743.7 2825.1 2214.8 TRUE FALSE 3658.772556 3578.048584 3323.763431 4295.479557 3837.022892 3326.554025 3478.471959 3710.969226 3118.779255 2489.186145 1.469866994 1.437437128 1.335281187 1.725656221 1.54147688 1.336402274 1.397433441 1.490836366 1.252931309 1 11.28145841 -8.550598342 2.338865518 1.000085813 1.46720739 0.653579877 0.106993543 0.204274849 2.638280691 0.108243053 0.029596289 2.81E-09 8.550598342 0.467121577 T(ph)TRTPEEGGYSYDISEK ddPTM_A459_MK2206_30min_R2 2 TTRTPEEGGYSYDISEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.412)T(0.412)RT(0.176)PEEGGYSYDISEK;T(0.384)T(0.384)RT(0.232)PEEGGYSYDISEK 124.82 0.0017908 512820000 198554 275820 225720 243560 281290 229160 283960 217122 229120 251380 TRUE FALSE 213755.4469 262123.1799 233245.3921 223660.3689 270245.1412 237880.8444 246675.7109 245500.5909 249048.4434 243177.4912 0.879010002 1.077908891 0.959156997 0.919741247 1.111308205 0.978219009 1.014385459 1.009553103 1.024142663 1 17.89165017 -4.740586296 24.85340942 1.00861283 0.879009491 0.365399605 0.051928486 1669.980694 1990229.263 0.012617635 0.552633776 1.82E-05 4.740586296 -0.129603339 T(ph)TSFFLNSPEKEHQEMDEGSQSLEK ddPTM_A459_MK2206_30min_R2 1 TTSFFLNSPEKEHQEMDEGSQSLEK 25 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 T(0.26)T(0.26)S(0.26)FFLNS(0.214)PEKEHQEMDEGS(0.007)QSLEK 57.825 0.013746 3695800 19193 20339 16606 18232 17277 15801 24643 17834 17116 21602 TRUE FALSE 20662.43084 19328.99484 17159.63575 16742.38728 16598.61817 16402.31813 21407.3445 20164.96503 18604.71874 20897.12851 0.988768903 0.924959371 0.821148023 0.801181237 0.794301388 0.78490775 1.024415603 0.964963441 0.89030025 1 14.35101709 -7.263541136 24.99923668 0.96700011 0.84942682 0.418988216 0.067618628 211.8834744 2520213.977 0.030077797 0.021406824 5.45E-08 7.263541136 -0.11757329 T(ph)TSGDDACNLTSFR ddPTM_A459_MK2206_30min_R2 1 TTSGDDACNLTSFR 14 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0U1RQT6 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 T(0.959)T(0.02)S(0.02)GDDACNLTSFR 172.09 0.00030166 6926500 51585 35354 37365 42960 26411 27733 45756 30752 20724 37422 TRUE FALSE 55534.38726 33598.37177 38610.73045 39450.03058 25373.97144 28788.39875 39748.18224 34771.39199 22526.53606 36200.9232 1.534059973 0.928108147 1.066567563 1.089752058 0.700920562 0.795239353 1.097988082 0.960511194 0.622264132 1 15.14373887 -2.375057849 1.168880349 0.902023186 199.9999997 0.571836531 0.158116755 379.6629152 2.141597709 0.048304942 200822.9463 0.004216403 2.375057849 199.0979765 T(ph)TSPLEEEEREIK ddPTM_A459_MK2206_30min_R1 1 TTSPLEEEEREIK 13 1 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.721)T(0.162)S(0.116)PLEEEEREIK 96.707 0.019331 8468700 3581.2 3758.5 4886.2 5217.6 4355.1 2886.1 2765.4 4831.3 2063.4 1356.5 TRUE FALSE 3276.600134 3513.820967 4554.538358 5619.460456 4181.627145 3049.508488 2580.925212 4789.060453 2277.897814 1524.553461 2.14921957 2.304819776 2.987457294 3.685971401 2.742853728 2.000263399 1.692905679 3.141287318 1.494140988 1 10.57417103 -6.749541745 6.088674687 1.985964395 2.814666079 0.324813346 0.642502938 0.223239427 30.02814418 0.224833155 0.214520715 1.78E-07 6.749541745 0.828701684 T(ph)TSPPEVSGYSYEK ddPTM_A459_MK2206_30min_R2 2 TTSPPEVSGYSYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.91)T(0.018)S(0.072)PPEVSGYSYEK;T(0.973)T(0.01)S(0.017)PPEVSGYSYEK 234.83 1.38E-13 1280720000 176450 201233 179308 221208 223532 172109 226227 161236 180973 217353 TRUE FALSE 189959.1477 191240.0618 185286.0392 203134.5988 214755.0105 178658.7286 196523.1232 182310.0988 196713.7044 210260.7894 0.903445422 0.909537448 0.881220125 0.966107848 1.021374509 0.849700646 0.93466368 0.867066557 0.935570084 1 17.68182031 -5.745038956 24.9944756 0.933177314 0.899214648 0.115979822 0.050123472 669.9503838 1021006.18 0.013946876 0.024068956 1.80E-06 5.745038956 -0.033962665 T(ph)TSPPLSIPTTHLIHQPAGSR ddPTM_A459_MK2206_30min_R1 1 TTSPPLSIPTTHLIHQPAGSR 21 0 Q5T5U3;A0A087WW76;A0A452Q6Z5;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 T(0.331)T(0.331)S(0.331)PPLS(0.007)IPTTHLIHQPAGSR 90.972 0.00054521 43771000 2090.6 1814.8 1785.4 1509.5 2144.7 2030.6 1884 1712.6 1388.5 1281.5 TRUE FALSE 1912.783492 1696.65619 1664.212022 1625.761952 2059.272058 2145.570817 1758.321798 1697.626919 1532.839544 1440.261895 1.328080329 1.178019217 1.155492642 1.12879606 1.429790002 1.489708799 1.220834769 1.178693212 1.064278344 1 10.49211546 -8.146779819 1.873220193 1.009948375 1.275794331 0.445051415 0.109728887 0.377030183 2.359150375 0.112913076 0.034683797 7.13E-09 8.146779819 0.265845956 T(ph)TSPPLSIPTTHLIHQPAGSR ddPTM_A459_MK2206_30min_R2 3 TTSPPLSIPTTHLIHQPAGSR 21 0 Q5T5U3;A0A087WW76;A0A452Q6Z5;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 T(0.333)T(0.333)S(0.333)PPLS(0.001)IPTTHLIHQPAGSR;T(0.28)T(0.28)S(0.28)PPLS(0.159)IPTTHLIHQPAGSR;T(0.328)T(0.328)S(0.328)PPLS(0.016)IPTTHLIHQPAGSR 100.04 0.00038396 39372100 38875 51287 48587.4 55829 50421.2 51718 47231 38946.6 48550 45359.2 TRUE FALSE 41851.29989 48740.16216 50207.27967 51267.59211 48441.41034 53686.16473 41029.51297 44037.05434 52772.79124 43879.13302 0.953785934 1.110782251 1.144217677 1.168382066 1.103973734 1.223501037 0.935057512 1.003599007 1.202685368 1 15.4212474 -7.2626188 24.99998871 1.035635396 1.120058353 0.164557421 0.090514279 209.1112889 4432428.634 0.036715484 0.026332007 5.46E-08 7.2626188 0.084422957 T(ph)TSPSSDTDLLDR ddPTM_A459_MK2206_30min_R1 1 TTSPSSDTDLLDR 13 0 Q96QT6;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-2;K7ERZ4;K7EJ43;K7ENU0 Q96QT6;K7ENU0 PHF12 PHD finger protein 12 1 T(0.733)T(0.06)S(0.206)PS(0.001)SDTDLLDR 203.88 0.00011444 20471000 3542.4 3595.3 3383.8 2653.8 3278.9 2794.6 3195.8 2923.5 2763.2 2687.4 TRUE FALSE 3241.100278 3361.245317 3154.117084 2858.196136 3148.29447 2952.827837 2982.614013 2897.940148 3050.444528 3020.335401 1.073092835 1.112871543 1.044293651 0.946317464 1.042365847 0.977648984 0.987510861 0.959476271 1.009968803 1 11.56049305 -5.532747752 5.36447087 0.989095441 1.09050256 0.714390858 0.02659296 0.079321823 7.233075369 0.006871731 0.012900707 2.93E-06 5.532747752 0.101407118 T(ph)TSSANNPNLMYQDECDRR ddPTM_A459_MK2206_30min_R1 1 TTSSANNPNLMYQDECDRR 19 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 T(0.704)T(0.154)S(0.132)S(0.01)ANNPNLMYQDECDRR 74.364 0.012389 4981500 683.14 493.89 445.42 380.13 783.52 740 710.84 594.8 506.9 389.07 TRUE FALSE 625.0353557 461.7376712 415.1861314 409.4076785 752.3107393 781.8981605 663.4211606 589.5997263 559.594069 437.2709289 1.429400663 1.055953279 0.949494018 0.936279207 1.720468226 1.788132045 1.517185609 1.348362508 1.279742219 1 8.772383627 -6.252937559 24.9686849 1.480767602 1.079916339 0.320048828 0.245497572 698.3403618 2050929.745 0.075580856 0.095976877 5.59E-07 6.252937559 -0.400851263 T(ph)TSSANNPNLMYQDECDRR ddPTM_A459_MK2206_30min_R2 1 TTSSANNPNLMYQDECDRR 19 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 T(0.621)T(0.166)S(0.166)S(0.046)ANNPNLMYQDECDRR 73.383 0.014047 12739000 5603.4 6202.3 2078.2 5237.5 7572.2 8104 10072 10066 12318 10176 TRUE FALSE 6032.400612 5894.302801 2147.486151 4809.579496 7274.877381 8412.403399 8749.534301 11381.66076 13389.39737 9843.957953 0.612802355 0.598773667 0.218152715 0.488581881 0.73901955 0.854575308 0.888822803 1.156207779 1.360164015 1 13.26502278 -7.016839506 1.028153184 1.18630749 0.470735847 0.789075646 0.145640571 0.240932043 0.52360826 0.098491008 0.069624778 9.62E-08 7.016839506 -0.715571644 T(ph)TTPPDSGVLFEGLGISTRPR ddPTM_A459_MK2206_30min_R1 1 TTTPPDSGVLFEGLGISTRPR 21 1 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 T(0.535)T(0.074)T(0.373)PPDS(0.018)GVLFEGLGISTRPR 151.31 2.09E-06 18250000 1865.2 2662.1 2450.3 1834.4 1883 2109.3 2065.8 1869.6 2113 2011.1 TRUE FALSE 1706.554945 2488.796806 2283.980463 1975.685806 1807.996123 2228.726743 1927.994251 1853.254284 2332.653911 2260.250251 0.755029203 1.101115598 1.010498931 0.87410047 0.79990971 0.98605309 0.853000348 0.819933228 1.032033471 1 11.1422668 T(ph)TTPPDSGVLFEGLGISTRPR ddPTM_A459_MK2206_30min_R2 1 TTTPPDSGVLFEGLGISTRPR 21 1 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 T(0.708)T(0.159)T(0.119)PPDS(0.014)GVLFEGLGISTRPR 143.09 1.42E-05 8693100 20285 22213 23704 24909 14505 18731 27371 19679 15852 19202 TRUE FALSE 21838.0352 21109.93472 24494.27953 22873.85502 13935.46082 19443.82133 23777.15482 22251.11287 17230.77831 18575.44031 1.175640245 1.136443302 1.318637896 1.231403113 0.750208909 1.046748879 1.280031828 1.197878085 0.92761076 1 14.18110879 T(ph)TTSPFFSEDTFR ddPTM_A459_MK2206_30min_R2 1 TTTSPFFSEDTFR 13 0 A0A5F9ZHK5;A0A5F9ZGT0;H0Y9K9;G5E9Z1;A0A590UJE4;A0A494C0H4;H0Y9M2;Q17R98-3;Q17R98-2;Q17R98 A0A5F9ZHK5 ZNF827 Zinc finger protein 827 1 T(0.589)T(0.047)T(0.047)S(0.316)PFFS(0.001)EDTFR 101.72 0.023121 3125600 13047 19008 14051 14463 14665 16045 16941 13222 16333 12573 TRUE FALSE 14045.88835 18064.09036 14519.45333 13281.32664 14089.17841 16655.60372 14716.62635 14950.1608 17753.61482 12162.74404 1.154828903 1.485198595 1.193764604 1.091967947 1.158388137 1.369395234 1.209975833 1.229176636 1.459671827 1 13.57018113 -11.8015469 2.107307342 3.90E-05 1.258675594 0.277314312 0.126514622 3608584.273 589844.4204 17137901.49 0.031636116 1.58E-12 11.8015469 1.258636642 T(ph)VASDLQK ddPTM_A459_MK2206_30min_R1 2 TVASDLQK 8 0 Q7L8J4;Q7L8J4-2 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 T(0.752)VAS(0.248)DLQK;T(0.889)VAS(0.111)DLQK 131.52 0.0082976 92097000 10058.3 11564.5 10456 9036.9 8535 8905.1 9910.8 9492.5 10059.6 9291.9 TRUE FALSE 9202.788767 10811.64895 9746.275852 9732.923604 8195.032877 9409.299066 9249.668615 9409.508073 11105.33142 10443.05072 0.881235667 1.035296029 0.933278609 0.932000032 0.784735524 0.901010568 0.885724762 0.901030582 1.063418317 1 13.35025561 -8.254210527 24.49165427 1.031709162 0.90783269 0.409904727 0.059942712 401.5487104 1360478.422 0.045105054 0.01623968 5.57E-09 8.254210527 -0.123876471 T(ph)VASDLQK ddPTM_A459_MK2206_30min_R2 3 TVASDLQK 8 0 Q7L8J4;Q7L8J4-2 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 T(0.961)VAS(0.039)DLQK;T(0.927)VAS(0.073)DLQK;T(0.907)VAS(0.093)DLQK 131.52 0.0082976 155145000 457909 510090 480670 478592 459302 379637 523420 398759 361521 458050 TRUE FALSE 492966.8651 484759.6723 496695.2979 439489.5027 441267.4957 394084.3521 454694.3253 450878.1704 392965.4431 443103.866 1.112531176 1.094009124 1.12094553 0.991843079 0.995855666 0.889372407 1.026157432 1.017545106 0.886847246 1 18.75728539 -5.824890744 4.542909064 0.971166444 1.108107079 0.65291302 0.045794547 0.12675409 5.146704429 0.013011677 0.020303897 1.50E-06 5.824890744 0.136940635 T(ph)VFSPTLPAAR ddPTM_A459_MK2206_30min_R1 1 TVFSPTLPAAR 11 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 T(0.581)VFS(0.334)PT(0.086)LPAAR 153.54 0.001307 73832000 8524.5 7801 8476.7 6956.1 8289.2 7162.8 8002.6 7588.1 6481.3 6137.2 TRUE FALSE 7799.446511 7293.153482 7901.325221 7491.860027 7959.023611 7568.351546 7468.761156 7521.758042 7155.054329 6897.522669 1.130760548 1.057358393 1.145530881 1.086166786 1.15389597 1.097256495 1.082817921 1.090501388 1.037336834 1 12.75186258 -8.346945748 1.047573636 0.999250484 1.110789728 0.638133211 0.027469406 0.306057547 0.714024075 0.024675742 0.008267627 4.50E-09 8.346945748 0.111539245 T(ph)VFSPTLPAAR ddPTM_A459_MK2206_30min_R2 3 TVFSPTLPAAR 11 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 T(0.977)VFS(0.019)PT(0.004)LPAAR;T(0.956)VFS(0.023)PT(0.02)LPAAR;T(0.925)VFS(0.041)PT(0.034)LPAAR 181.4 9.90E-05 266713000 335407 436504 365520 442641 346751 356235 442529 385600 312915 308315 TRUE FALSE 361086.0178 414827.8461 377706.2544 406475.8144 333135.8135 369791.7726 384424.4107 435999.244 340131.7811 298254.7068 1.210663267 1.390850963 1.266388244 1.362847945 1.116950733 1.239852261 1.28891314 1.46183525 1.140407086 1 18.18618538 -8.521753685 24.69297534 0.999999994 1.290092225 0.512762571 0.09182355 64.19194312 1408877.333 0.088465102 0.022841591 3.01E-09 8.521753685 0.290092231 T(ph)VGTPIASVPGSTNTGTVPGSEK ddPTM_A459_MK2206_30min_R1 1 TVGTPIASVPGSTNTGTVPGSEK 23 0 A0A087WW66;Q99460-2;Q99460;H7BZR6 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 1 T(0.518)VGT(0.415)PIAS(0.067)VPGSTNTGTVPGSEK 98.747 7.82E-05 10788000 5768.9 5036.9 5330.9 4167.7 3979.8 4577.5 5845.5 4277.3 5891.8 7195.7 TRUE FALSE 5278.224761 4708.996895 4969.053361 4488.696976 3821.276139 4836.674094 5455.557361 4239.904017 6504.273694 8087.157641 0.652667475 0.582280834 0.614437554 0.555040124 0.472511642 0.598068482 0.674595155 0.524276168 0.804271907 1 12.98141702 -8.500481712 3.290737183 0.998938747 0.584404933 0.848643206 0.056610879 0.077435661 2.014850636 0.056103056 0.014879591 3.16E-09 8.500481712 -0.414533814 T(ph)VHPNSPGIPYR ddPTM_A459_MK2206_30min_R2 1 TVHPNSPGIPYR 12 0 J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;F8VWY3;C9J102;C9JNI4 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 T(0.998)VHPNS(0.002)PGIPYR 101.43 0.016997 5340500 25436 27773 22418 30876 26371 33765 32357 22281 29130 29300 TRUE FALSE 27383.39972 26393.83321 23165.40493 28353.33203 25335.54204 35049.95074 28108.48703 25193.2032 31663.67475 28343.9434 0.966111149 0.931198346 0.817296472 1.000331239 0.893860875 1.236594014 0.991692886 0.888839032 1.117123129 1 14.79075287 T(ph)VIIEQSWGSPK ddPTM_A459_MK2206_30min_R1 2 TVIIEQSWGSPK 12 0 P10809;E7ESH4;E7EXB4;C9JL19;C9JCQ4;C9JL25;P10809-2 P10809 HSPD1 "60 kDa heat shock protein, mitochondrial" 1 T(0.785)VIIEQS(0.155)WGS(0.06)PK;T(0.952)VIIEQS(0.047)WGS(0.001)PK 216.83 1.20E-07 187932000 13241.6 16383.3 14942.2 14744.7 10097.5 9295.5 10860.9 11116.5 12937 12453.1 TRUE FALSE 12115.33239 15316.74419 13927.9651 15880.33935 9695.295193 9821.803177 10136.38918 11019.30961 14281.84745 13995.88404 0.865635379 1.094374899 0.99514722 1.134643535 0.692724744 0.701763686 0.724240723 0.787325015 1.020431964 1 13.772715 -6.261760896 24.99999974 0.799639391 1.025637516 0.373009299 0.126046913 28.87543944 2245236.257 0.038275287 0.046152327 5.47E-07 6.261760896 0.225998125 T(ph)VIIEQSWGSPK ddPTM_A459_MK2206_30min_R2 1 TVIIEQSWGSPK 12 0 P10809;E7ESH4;E7EXB4;C9JL19;C9JCQ4;C9JL25;P10809-2 P10809 HSPD1 "60 kDa heat shock protein, mitochondrial" 1 T(1)VIIEQSWGSPK 206.74 2.34E-05 29047000 154460 133720 140760 120140 112750 92847 149490 84299 122190 129320 TRUE FALSE 166285.5764 127079.6592 145452.8681 110324.1777 108322.8685 96380.35765 129861.7834 95317.16874 132817.8653 125100.299 1.329218057 1.015822186 1.162690012 0.881885803 0.865888166 0.770424679 1.038061335 0.761925987 1.06169103 1 16.93272571 -5.760304503 24.99805408 0.898997114 1.153901352 0.491478369 0.119414058 23.92402868 526949.0472 0.030964301 0.049995021 1.74E-06 5.760304503 0.254904237 T(ph)VQSLEIDLDSMR ddPTM_A459_MK2206_30min_R1 1 TVQSLEIDLDSMR 13 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 T(1)VQSLEIDLDSMR 158.89 0.00085234 3118900 385.62 493.9 527.97 477.88 372.75 236.87 562.39 415.66 582.62 417.72 TRUE FALSE 352.820994 461.7470202 492.1328674 514.6864004 357.9025782 250.2813747 524.8739892 412.0259284 643.1854339 469.4703072 0.751529945 0.983548934 1.048272617 1.096312999 0.762354025 0.533114386 1.118013176 0.877640017 1.370023671 1 8.874890104 T(ph)VSDNSLSNSR ddPTM_A459_MK2206_30min_R1 2 TVSDNSLSNSR 11 0 H0Y7W6;B7ZL14;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 H0Y7W6;Q96RU3-5 FNBP1 Formin-binding protein 1 1 T(0.583)VS(0.062)DNS(0.355)LSNSR;T(0.996)VS(0.003)DNSLSNSR 175.21 0.00020369 90578000 4925.3 5175.4 5363.1 4926.3 6279.9 5075.6 6037.7 5469.7 4844.9 4488.9 TRUE FALSE 4506.377371 4838.480519 4999.067714 5305.72448 6029.758285 5362.976086 5634.936049 5421.87899 5348.544693 5045.018821 0.893233015 0.959060945 0.990891787 1.051675854 1.195190444 1.063024 1.11693063 1.074699457 1.060163476 1 12.30064394 -5.538428242 1.793013695 1.090619617 0.917576133 0.625788127 0.049083498 0.230399073 1.440748488 0.0145658 0.039956389 2.89E-06 5.538428242 -0.173043484 T(ph)VSDNSLSNSR ddPTM_A459_MK2206_30min_R2 1 TVSDNSLSNSR 11 0 H0Y7W6;B7ZL14;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 H0Y7W6;Q96RU3-5 FNBP1 Formin-binding protein 1 1 T(0.746)VS(0.252)DNS(0.002)LSNSR 155.88 0.001263 21706000 31296 29162 35142 38883 32950 28855 36045 36572 29616 29345 TRUE FALSE 33692.04582 27713.85749 36313.61674 35706.13452 31656.21744 29953.09724 31312.2482 41352.08597 32191.94615 28387.47505 1.186863071 0.976270606 1.279212634 1.257812977 1.115147345 1.055151865 1.103030408 1.456701799 1.134019355 1 14.79296691 T(ph)VSFEALPIMR ddPTM_A459_MK2206_30min_R1 1 TVSFEALPIMR 11 0 O15084-2;O15084;O15084-4;O15084-1 O15084-2 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A 1 T(0.732)VS(0.268)FEALPIMR 140.63 0.0025036 8237600 2325 1988.1 1897.9 1435.6 1834.5 1452.5 1771.8 1438.9 1459.5 1509.3 TRUE FALSE 2127.246541 1858.674329 1769.075836 1546.170161 1761.42798 1534.739295 1653.606455 1426.319849 1611.220248 1696.283479 1.254063114 1.095733321 1.042912849 0.911504581 1.038404254 0.90476581 0.974840866 0.840849933 0.949853175 1 10.72816157 -3.216160614 0.606583341 0.930251076 3.262619265 0.763821793 0.053764171 8.922214026 0.550687728 0.023259666 22.07823559 0.00060791 3.216160614 2.332368189 T(ph)VSFEALPIMR ddPTM_A459_MK2206_30min_R2 1 TVSFEALPIMR 11 0 O15084-2;O15084;O15084-4;O15084-1 O15084-2 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A 1 T(0.996)VS(0.004)FEALPIMR 193.28 4.74E-05 1378100 5031.6 5926.6 4406.3 6085.3 3131.3 4449.3 4412.4 4609.7 3870.3 4546.8 TRUE FALSE 5416.823165 5632.293662 4553.203843 5588.111524 3008.349428 4618.621229 3833.04658 5212.203617 4206.931698 4398.438288 1.231533287 1.280521243 1.035186479 1.270476282 0.68395854 1.050059345 0.87145626 1.185012333 0.956460321 1 12.10277566 -6.207457032 24.9999562 0.967367364 1.197775761 0.440293496 0.135874168 320.9560907 148638.815 0.039291078 0.050724536 6.20E-07 6.207457032 0.230408397 T(ph)VSPPIR ddPTM_A459_MK2206_30min_R2 1 TVSPPIR 7 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 T(0.999)VS(0.001)PPIR 118.74 0.024329 0 8100.2 5508.1 7336.7 8216.6 9673.8 6258.5 10498 6400 7912.4 7879.8 TRUE FALSE 8720.35754 5234.575764 7581.301916 7545.277496 9293.958005 6496.671603 9119.59999 7236.501974 8600.60625 7622.682771 1.144001108 0.68671043 0.994571353 0.989845403 1.219250267 0.852281513 1.196376691 0.949337942 1.128291247 1 12.89608312 -5.663283058 3.217723518 1.05240273 0.903690739 0.104440818 0.147798305 0.437928919 8.951536035 0.038709387 0.072007294 2.17E-06 5.663283058 -0.148711992 T(ph)VSPPTVCTIPTVVGR ddPTM_A459_MK2206_30min_R1 1 TVSPPTVCTIPTVVGR 16 0 Q9BWT3-2;Q9BWT3;A0A0C4DH56 Q9BWT3-2 PAPOLG Poly(A) polymerase gamma 1 T(0.997)VS(0.003)PPTVCTIPTVVGR 212.35 7.03E-08 17739000 4946.4 4995.2 5124.5 4184.8 4028.1 3810.7 5114.2 3979 5069.4 5732.9 TRUE FALSE 4525.682705 4670.011572 4776.663218 4507.114021 3867.652247 4026.458541 4773.041049 3944.212023 5596.382271 6443.134933 0.702403838 0.724804248 0.741357005 0.699521905 0.600274911 0.624922275 0.74079483 0.61215729 0.868580641 1 12.65354709 -8.477675338 3.915128743 0.99879866 0.683036443 0.815880147 0.050003925 0.080162249 2.712190398 0.050896034 0.013366301 3.33E-09 8.477675338 -0.315762217 T(ph)VSPPTVCTIPTVVGR ddPTM_A459_MK2206_30min_R2 4 TVSPPTVCTIPTVVGR 16 0 Q9BWT3-2;Q9BWT3;A0A0C4DH56 Q9BWT3-2 PAPOLG Poly(A) polymerase gamma 1 T(0.999)VS(0.001)PPTVCTIPTVVGR;T(1)VSPPTVCTIPTVVGR;T(0.996)VSPPT(0.003)VCTIPTVVGR;T(0.999)VS(0.001)PPTVCTIPTVVGR 165.89 4.06E-05 33670300 55287.6 59578 62126 66945 63042 60333.1 68224.8 51262.4 53009.8 60705 TRUE FALSE 59520.46116 56619.44315 64197.24983 61475.37935 60566.65432 62629.1184 59266.80181 57962.57169 57620.49658 58724.20082 1.013559322 0.964158598 1.093199208 1.046849144 1.031374688 1.066495883 1.009239819 0.987030404 0.981205291 1 15.84166755 -7.510853966 5.676124532 0.98955297 1.035849792 0.303118183 0.031933542 0.221365538 25.4332117 0.015245011 0.009417033 3.08E-08 7.510853966 0.046296822 T(ph)VSVPSEGQFPEYPPEGATK ddPTM_A459_MK2206_30min_R2 1 TVSVPSEGQFPEYPPEGATK 20 0 Q9UJF2-2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 T(0.788)VS(0.207)VPS(0.005)EGQFPEYPPEGATK 107.88 0.0013786 0 20626 16772 17153 13971 18205 14225 20321 10908 16677 18733 TRUE FALSE 22205.14242 15939.12687 17724.87246 12829.52461 17490.18023 14766.34234 17652.82829 12333.71305 18127.53531 18121.74374 1.225331443 0.879558121 0.978099719 0.70796303 0.965148855 0.814841141 0.974124154 0.680602994 1.000319592 1 14.14543416 -4.761399445 10.73963956 0.878776664 1.226282538 0.439985073 0.113323444 0.057633642 198.0622644 0.025684153 0.14467777 1.73E-05 4.761399445 0.347505875 T(ph)VTNAVVTVPAYFNDSQR ddPTM_A459_MK2206_30min_R2 2 TVTNAVVTVPAYFNDSQR 18 0 P11142;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PI65 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 T(0.989)VT(0.011)NAVVTVPAYFNDSQR;T(0.997)VT(0.003)NAVVTVPAYFNDSQR 206.63 4.54E-11 7219700 18361.1 20932.1 16647.8 17348.4 14753.8 17010.6 18757 15183.3 14516.9 16809.1 TRUE FALSE 19766.83993 19892.64235 17202.82934 15930.98023 14174.49168 17657.9503 16294.18337 17167.80944 15779.55372 16260.62044 1.215626427 1.223363058 1.057944216 0.979727697 0.871706693 1.085933367 1.002064062 1.055790552 0.97041523 1 13.98909469 -5.364149639 3.119324108 0.997082059 1.223801259 0.732397687 0.053408341 0.129838225 2.381556908 0.015003844 0.037372579 4.32E-06 5.364149639 0.2267192 T(ph)VTPASSAK ddPTM_A459_MK2206_30min_R1 1 TVTPASSAK 9 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 T(0.941)VT(0.059)PASSAK 112.85 0.022118 470230000 16241 14114 12276 11611 8689.8 6810.1 13409 12939 0 7595.2 TRUE FALSE 14859.61767 13195.17603 11442.73932 12505.28123 8343.666865 7195.681977 12514.51008 12825.87569 0 8536.150717 1.740786703 1.545799327 1.340503431 1.464978964 0.977450744 0.842965666 1.466060112 1.502536227 0 1 13.05936993 -3.242557927 0.257489086 0.824686719 3.638561923 0.347417798 0.389090789 26.49763037 0.782131412 0.507889248 27.18932172 0.000572061 3.242557927 2.813875204 T(ph)VTPASSAK ddPTM_A459_MK2206_30min_R2 6 TVTPASSAK 9 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 T(0.999)VT(0.001)PASSAK;T(0.995)VT(0.005)PASSAK;T(0.98)VT(0.02)PASSAK;T(1)VTPASSAK;T(1)VTPASSAK;T(0.999)VT(0.001)PASSAK 167.09 0.0020196 3345095000 7435300 7513850 6965330 7414920 8242960 5975730 7551650 6410660 6175120 7695620 TRUE FALSE 8004552.285 7140723.135 7197550.626 6809097.317 7919299.973 6203140.593 6560109.284 7248555.273 6712220.776 7444512.55 1.07522853 0.95919284 0.966826314 0.914646496 1.063776832 0.833250069 0.881200648 0.973677622 0.901633348 1 22.82774596 -6.759201803 24.99994696 0.914010216 0.987759914 0.276331754 0.062237866 86.44231213 965804.0051 0.020881206 0.019931441 1.74E-07 6.759201803 0.073749698 T(ph)VVLTPTYSGEADALLPSLR ddPTM_A459_MK2206_30min_R2 1 TVVLTPTYSGEADALLPSLR 20 0 Q96Q42-3;Q96Q42 Q96Q42-3 ALS2 Alsin 1 T(0.954)VVLT(0.045)PT(0.001)YSGEADALLPSLR 154.52 8.15E-06 2263700 14520 16761 16913 17234 19549 16969 17008 12297 15112 15911 TRUE FALSE 15631.66236 15928.67311 17476.87098 15825.92707 18781.40803 17614.76719 14774.82917 13904.26012 16426.41444 15391.82537 1.015582102 1.034878757 1.135464479 1.028203393 1.220219667 1.144423534 0.959914033 0.903353552 1.067216788 1 13.90987672 -7.270648965 24.87583851 0.974567215 1.097958277 0.387846206 0.069757482 649.0229113 1753056.166 0.029971488 0.020527674 5.36E-08 7.270648965 0.123391063 T(ph)WSPTACGGK ddPTM_A459_MK2206_30min_R2 2 TWSPTACGGK 10 0 Q15464;Q15464-2 Q15464 SHB SH2 domain-containing adapter protein B 1 T(0.999)WS(0.001)PTACGGK;T(0.688)WS(0.28)PT(0.032)ACGGK 132.32 0.005754 31603000 111502 109819 113415 121050 105577 105878 130794 102665 107829 127663 TRUE FALSE 120038.6789 104365.5482 117196.1995 111159.8278 101431.5165 109907.2615 113620.5907 116083.668 117207.7715 123497.3668 0.971993833 0.845083186 0.948977315 0.900098769 0.821325338 0.889956315 0.920024399 0.939968771 0.949071017 1 16.91412076 -8.2298541 1.103847531 0.995171849 0.894443767 0.371477189 0.041813111 0.497557558 1.209323687 0.039073908 0.013107977 5.89E-09 8.2298541 -0.100728082 T(ph)Y(ph)QLY(ph)SRT(ph)S(ph)GK ddPTM_A459_MK2206_30min_R1 1 TYQLYSRTSGK 11 1 P55075-2;P55075-3;P55075;P55075-4 P55075-2 FGF8 Fibroblast growth factor 8 5 T(0.994)Y(0.993)QLY(0.783)S(0.385)RT(0.922)S(0.922)GK 42.21 0.035912 676810 244.36 80.324 230.31 192.98 247.37 73.786 281.89 0 205.71 0 TRUE FALSE 223.5758988 75.094893 214.6771989 207.843353 237.5167291 77.96369956 263.0856324 0 227.0942906 0 0 T(ph)Y(ph)VDEVNSELVNIYT(ph)FNHTVTR ddPTM_A459_MK2206_30min_R1 1 TYVDEVNSELVNIYTFNHTVTR 22 0 E9PMC3;F5H8L4;C9JBG5;Q8NBJ9;Q8NBJ9-2 E9PMC3 SIDT2 SID1 transmembrane family member 2 3 T(0.998)Y(0.994)VDEVNS(0.008)ELVNIY(0.003)T(0.41)FNHT(0.326)VT(0.261)R 50.088 0.03305 4169100 993.67 307.72 653.62 393.94 1188.5 1080.8 1243.4 742.46 570.98 459.98 TRUE FALSE 909.1531485 287.6873721 609.2540955 424.2813271 1141.159528 1141.993962 1160.455055 735.9687505 630.3354143 516.9657951 1.75863308 0.556492083 1.178519162 0.820714506 2.207417859 2.209031957 2.244742429 1.423631423 1.219298105 1 9.013925018 -6.252249156 24.81321347 1.789488562 1.048434822 0.277781274 0.495516543 721.3585593 1947636.47 0.149504978 0.190230563 5.59E-07 6.252249156 -0.74105374 T(ph)YGGDTGSPEISFTK ddPTM_A459_MK2206_30min_R1 2 TYGGDTGSPEISFTK 15 0 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915 H0Y9X0 FRYL Protein furry homolog-like 1 T(0.98)Y(0.015)GGDT(0.005)GSPEISFTK;T(0.528)YGGDT(0.426)GS(0.046)PEISFTK 158.31 0.00034446 15979000 7331 6020 6259.8 5936.2 6516.7 6545 7303 6689.5 5891.5 6229.1 TRUE FALSE 6707.459953 5628.096906 5834.902217 6393.407153 6257.12604 6915.572244 6815.830195 6631.014407 6503.942508 7000.807935 0.958097982 0.803921056 0.833461262 0.913238474 0.89377199 0.987824878 0.973577658 0.94717845 0.929027416 1 12.77330571 -6.429966243 1.830478142 0.963961154 0.864255957 0.479359853 0.044291018 0.297473615 1.985416858 0.016235981 0.018904027 3.72E-07 6.429966243 -0.099705197 T(ph)YGGDTGSPEISFTK ddPTM_A459_MK2206_30min_R2 1 TYGGDTGSPEISFTK 15 0 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915 H0Y9X0 FRYL Protein furry homolog-like 1 T(0.478)Y(0.003)GGDT(0.47)GS(0.048)PEIS(0.001)FTK 115.18 0.0056232 6828800 30032 37853 29255 39813 36986 36392 40935 31839 33423 33850 TRUE FALSE 32331.27301 35973.27506 30230.3471 36560.15054 35533.7438 37776.92306 35560.18533 36000.46662 36330.07213 32745.47727 0.987350795 1.098572324 0.923191525 1.116494661 1.085149668 1.153653152 1.085957155 1.099402715 1.109468395 1 14.99900804 -5.802940746 24.99999403 1.098939213 1.012591193 0.356895945 0.054389991 146.3286085 88146.17528 0.014287135 0.021191515 1.57E-06 5.802940746 -0.08634802 T(ph)YSAPAINAIQGGSFESPK ddPTM_A459_MK2206_30min_R1 1 TYSAPAINAIQGGSFESPK 19 0 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 T(0.499)YS(0.499)APAINAIQGGS(0.001)FESPK 115.74 0.0011045 16129000 1680.2 1791.9 1378.7 1190.7 1181.4 1291.3 1247.3 1125.4 1346.7 1534.2 TRUE FALSE 1537.290167 1675.246984 1285.117685 1282.40792 1134.342336 1364.41229 1164.094893 1115.560746 1486.694284 1724.268279 0.891560893 0.971569799 0.745311911 0.743740366 0.657868819 0.791299305 0.675123997 0.64697632 0.8622175 1 10.75176855 -5.269349024 23.71651051 0.745807967 0.931565349 0.279897037 0.102925547 273.1844267 819129.4641 0.025125849 0.053980701 5.38E-06 5.269349024 0.185757382 T(ph)YSAPAINAIQGGSFESPK ddPTM_A459_MK2206_30min_R2 2 TYSAPAINAIQGGSFESPK 19 0 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 T(0.559)Y(0.001)S(0.44)APAINAIQGGSFESPK;T(0.749)YS(0.251)APAINAIQGGSFESPK 109.42 0.001632 12590700 88611 74762 67483 71805 60306 49200 74745 50930 49629 75225 TRUE FALSE 95395.12629 71049.42779 69732.84954 65938.30181 57938.08343 51072.34048 64930.89172 57586.72587 53945.64071 72770.41441 1.31090536 0.976350463 0.958258244 0.906114145 0.796176357 0.701828358 0.892270468 0.791348054 0.741312814 1 16.15106441 -1.522886937 0.697209637 0.812764178 61.26762252 0.741747786 0.084218725 132.5509005 0.711514304 0.032311536 12485.69488 0.029999434 1.522886937 60.45485834 T(ph)YSDEANQMR ddPTM_A459_MK2206_30min_R1 3 TYSDEANQMR 10 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 T(0.76)YS(0.24)DEANQMR;T(0.994)YS(0.006)DEANQMR;T(0.857)YS(0.143)DEANQMR 190.36 0.00042169 90547000 7502.5 7657.2 7898.4 6768.3 8338.5 7384.2 8248.4 7657.4 6628.3 6456.8 TRUE FALSE 6864.372978 7158.714888 7362.278614 7289.595639 8006.359888 7802.287023 7698.164286 7590.452159 7317.335505 7256.71713 0.945933658 0.986494962 1.014546727 1.004530769 1.10330329 1.075181364 1.060832901 1.045989808 1.008353416 1 12.82510132 -5.29702677 1.211112874 1.050775492 0.943859739 0.511196467 0.030902124 0.584147357 1.286091021 0.010399536 0.062569456 5.05E-06 5.29702677 -0.106915752 T(ph)YSDEANQMR ddPTM_A459_MK2206_30min_R2 3 TYSDEANQMR 10 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 T(0.942)YS(0.058)DEANQMR;T(0.919)YS(0.081)DEANQMR;T(1)YSDEANQMR 176.32 0.0001564 286668000 81328 95837 84222 93663 84823 84805 112166 71604 70873 103092 TRUE FALSE 87554.53421 91077.87394 87029.91944 86010.43329 81492.42282 88032.3137 97438.46946 80962.88865 77037.40543 99728.11648 0.877932295 0.913261748 0.872671845 0.86244919 0.817145913 0.882723116 0.977041108 0.811836135 0.772474285 1 16.60571268 -4.726641174 0.005040495 1.729277575 2.26E-07 0.056795149 0.065466914 145165.8516 112.483095 18584.49074 20024.79709 1.88E-05 4.726641174 -1.729277349 T(ph)YSFEQPWPNAR ddPTM_A459_MK2206_30min_R1 1 TYSFEQPWPNAR 12 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 T(0.934)YS(0.066)FEQPWPNAR 221.86 5.56E-08 15023000 838.89 724.04 792.65 980.22 1043.4 1405.7 1767.2 1384.8 1603.9 1539.4 TRUE FALSE 767.5380003 676.9048644 738.8471264 1055.716714 1001.839169 1485.289519 1649.313312 1372.69284 1770.631145 1730.112494 0.443634736 0.391249047 0.427051495 0.610201197 0.579060132 0.858493031 0.953298308 0.793412477 1.023419663 1 10.75665013 -6.551104497 0.896925655 0.95941146 0.399789651 0.907801201 0.071224121 0.159957083 0.282048902 0.039512906 0.046030482 2.81E-07 6.551104497 -0.559621809 down T(ph)YSGPMNK ddPTM_A459_MK2206_30min_R1 1 TYSGPMNK 8 0 Q8WVV4-3;Q8WVV4;Q8WVV4-1 Q8WVV4-3 POF1B Protein POF1B 1 T(0.955)YS(0.045)GPMNK 117.31 0.020865 8913500 1518.9 1746.9 1736.4 1453.2 1990.2 1847.8 3871.7 4166.5 4500.9 4557.1 TRUE FALSE 1389.709579 1633.176492 1618.538006 1565.125716 1910.92612 1952.420839 3613.425957 4130.07273 4968.784662 5121.667952 0.271339257 0.318875903 0.316017755 0.305589064 0.37310621 0.381208008 0.70551742 0.80639213 0.970149707 1 12.32239801 -7.517975903 1.146165181 0.993964625 0.30192869 0.986273666 0.03259511 0.049040133 0.120128331 0.02401231 0.011118208 3.03E-08 7.517975903 -0.692035936 down T(ph)YSGPMNK ddPTM_A459_MK2206_30min_R2 1 TYSGPMNK 8 0 Q8WVV4-3;Q8WVV4;Q8WVV4-1 Q8WVV4-3 POF1B Protein POF1B 1 T(0.996)YS(0.004)GPMNK 128.6 0.010026 5055400 14657 15661 19666 22873 24088 22627 38904 36966 38836 50312 TRUE FALSE 15779.15119 14883.29751 20321.65462 21004.20273 23142.18409 23488.08634 33795.85807 41797.58312 42213.88508 48670.32356 0.324204773 0.305798204 0.417536871 0.431560779 0.475488602 0.482595648 0.694383263 0.858789917 0.867343424 1 15.57075475 -7.469127932 0.712284876 1.002319739 0.342858879 0.972357281 0.039305773 0.109092044 0.106591757 0.037535614 0.021249539 3.40E-08 7.469127932 -0.659460861 down T(ph)YSMICLAIDDDDKTDK ddPTM_A459_MK2206_30min_R1 1 TYSMICLAIDDDDKTDK 17 1 Q8IUC4-2;Q8IUC4 Q8IUC4-2 RHPN2 Rhophilin-2 1 T(0.846)YS(0.154)MICLAIDDDDKTDK 195.48 1.30E-07 19278000 2537.9 3308.7 3050.3 3354.2 1835.4 1330 2396.1 2572.2 2875.8 2391.2 TRUE FALSE 2322.038278 3093.303029 2843.254135 3612.541065 1762.292131 1405.303451 2236.260541 2549.711527 3174.749701 2687.439909 0.864033562 1.151022212 1.057978683 1.344231383 0.655751269 0.522915302 0.832115551 0.948751084 1.181328628 1 11.39201678 -6.269258567 24.99969218 0.836318379 1.104342747 0.261101556 0.202220726 837.5553043 2677847.714 0.066746057 0.077071612 5.38E-07 6.269258567 0.268024368 T(ph)YSSGSSGGSHPSSR ddPTM_A459_MK2206_30min_R2 1 TYSSGSSGGSHPSSR 15 0 H7C3Q7 H7C3Q7 ABI2 1 T(0.332)YS(0.332)S(0.332)GS(0.005)SGGSHPSSR 106.31 0.0061228 449960 505.5 964.31 0 457.89 1033.6 1040.6 396.87 406.18 941.23 0 TRUE FALSE 544.2014687 916.4237676 0 420.4789223 993.0156706 1080.200762 344.7604923 459.2691206 1023.096484 0 0 T(ph)YSSSGSSGGSHPSSR ddPTM_A459_MK2206_30min_R1 2 TYSSSGSSGGSHPSSR 16 0 H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9 H0Y6B5 ABI2 Abl interactor 2 1 T(0.637)YS(0.12)S(0.12)S(0.12)GS(0.001)S(0.001)GGSHPSSR;T(0.486)YS(0.241)S(0.241)S(0.031)GS(0.001)S(0.001)GGSHPSSR 220.25 1.98E-10 2861610 1037.97 277.18 495.9 400.55 1363.9 1614.51 1293.1 1040.07 119.69 225.88 TRUE FALSE 949.6852009 259.1355316 462.2396897 431.4004304 1309.572975 1705.922161 1206.839658 1030.976778 132.1322038 253.8637197 3.740925257 1.020766307 1.820818233 1.699338649 5.158566874 6.719834417 4.753887873 4.061142643 0.520484786 1 7.98791042 -6.246544789 24.33642975 4.058830747 1.977651937 0.138566967 1.864849258 927.8791943 1516070.007 0.567398523 0.729230552 5.67E-07 6.246544789 -2.08117881 T(ph)YSTSFTPMYHAVTK ddPTM_A459_MK2206_30min_R1 1 TYSTSFTPMYHAVTK 15 0 P00390-5;P00390-4;P00390-2;P00390-3;P00390 P00390-5 GSR "Glutathione reductase, mitochondrial" 1 T(0.217)YS(0.217)T(0.174)S(0.174)FT(0.217)PMYHAVTK 79.393 0.042254 7238500 3941.3 4163.2 4759.7 3577.4 3840.3 4434.2 4585.6 4006.9 4060.9 3561.1 TRUE FALSE 3606.071738 3892.174923 4436.624825 3852.931968 3687.332719 4685.260572 4279.702991 3971.868096 4483.045087 4002.275953 0.901005273 0.972490395 1.108525468 0.962685235 0.921308966 1.170649057 1.069317319 0.992402359 1.120123934 1 11.96660493 -6.743876329 24.99934401 1.069949897 0.980097077 0.318480825 0.070803421 339.441752 483162.5682 0.024009956 0.02395894 1.80E-07 6.743876329 -0.08985282 T(ph)YTHEVVTLWYR ddPTM_A459_MK2206_30min_R2 1 TYTHEVVTLWYR 12 0 G3V5T9;P24941;Q00526;K7EJ83 G3V5T9 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 T(0.587)Y(0.009)T(0.404)HEVVTLWYR 111.88 0.0089658 5925800 23440 21501 23050 21414 26640 21615 26198 19985 19992 22368 TRUE FALSE 25234.58442 20433.29161 23818.4755 19664.4077 25593.97974 22437.57397 22758.17113 22597.10812 21730.86802 21638.13399 1.166208899 0.944318563 1.100763841 0.90878482 1.182818248 1.036945884 1.051762187 1.044318707 1.004285676 1 14.40128847 -8.242238749 3.165845335 0.999342362 1.051751564 0.063335307 0.080550143 0.799171272 15.3579677 0.066579227 0.019589449 5.72E-09 8.242238749 0.052409201 TAADVVS(ph)PGANSVDSR ddPTM_A459_MK2206_30min_R1 3 TAADVVSPGANSVDSR 16 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 TAADVVS(0.999)PGANS(0.001)VDSR;T(0.002)AADVVS(0.991)PGANS(0.006)VDS(0.001)R;TAADVVS(0.953)PGANS(0.047)VDSR 138.98 0.00040327 79614000 9334.7 8617.8 8940.9 8030.9 8719.5 7999.6 8564.7 8433.7 7829.2 7575.5 TRUE FALSE 8540.734747 8056.779654 8334.016619 8649.44131 8372.183851 8452.530439 7993.36449 8359.96505 8643.073357 8514.010132 1.003138899 0.946296696 0.978859138 1.015906861 0.983342012 0.992778997 0.938848365 0.981906871 1.015158923 1 13.05562309 -8.216697839 7.872011338 1.0075323 0.979265413 0.195012474 0.022256228 0.427949908 69.49669871 0.015726942 0.005814437 6.07E-09 8.216697839 -0.028266887 TAAILHGGS(ph)PDFVGNGK ddPTM_A459_MK2206_30min_R2 2 TAAILHGGSPDFVGNGK 17 0 H0YME5;Q9P2K8-2;Q9P2K8;Q9P2K8-3 H0YME5 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 1 TAAILHGGS(1)PDFVGNGK;TAAILHGGS(1)PDFVGNGK 128.66 0.00066 13320400 100964 109797 106472 123924 138111 108707 149603 93975 97235 128477 TRUE FALSE 108693.8815 104344.6406 110021.7233 113799.0128 132688.0682 112843.9211 129959.9464 106257.8552 105692.3245 124284.806 0.874554863 0.839560715 0.885238726 0.915630932 1.067612948 0.90794623 1.045662383 0.854954508 0.850404228 1 16.92329041 -5.79010743 3.221414977 0.951960952 0.860350905 0.244062354 0.068895523 0.358598165 7.657320793 0.020508697 0.034654264 1.62E-06 5.79010743 -0.091610048 TAALESNLPGS(ph)PNTSR ddPTM_A459_MK2206_30min_R1 4 TAALESNLPGSPNTSR 16 0 Q4KWH8-2;A0A2U3TZV8;Q4KWH8 Q4KWH8-2 PLCH1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1" 1 TAALESNLPGS(0.591)PNT(0.367)S(0.042)R;TAALESNLPGS(0.994)PNT(0.006)S(0.001)R;TAALES(0.013)NLPGS(0.97)PNT(0.014)S(0.002)R;TAALESNLPGS(0.913)PNT(0.044)S(0.044)R 228.99 3.49E-15 46196700 5386.6 5161.3 5145.4 4565.16 6204.1 4722 5413.1 4770.5 5165.1 4579.6 TRUE FALSE 4928.441384 4825.298432 4796.144584 4916.769414 5956.97756 4989.355559 5052.001976 4728.792021 5702.030628 5146.955422 0.957544991 0.937505386 0.931841096 0.955277249 1.157378891 0.969379983 0.981551531 0.918755193 1.107845349 1 12.32950357 -6.027028111 24.97499832 1.017594347 0.942108131 0.25367109 0.064616024 1079.873039 997842.6384 0.01921289 0.024879074 9.40E-07 6.027028111 -0.075486216 TAALESNLPGS(ph)PNTSR ddPTM_A459_MK2206_30min_R2 2 TAALESNLPGSPNTSR 16 0 Q4KWH8-2;A0A2U3TZV8;Q4KWH8 Q4KWH8-2 PLCH1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1" 1 TAALESNLPGS(0.986)PNT(0.012)S(0.002)R;TAALES(0.061)NLPGS(0.93)PNT(0.004)S(0.004)R 181.86 9.47E-07 81116000 31624 49663 36690 50762 36360 47932 51986 37871 37333 47406 TRUE FALSE 34045.15775 47196.80764 37913.22629 46614.58222 34932.32371 49756.08585 45160.17575 42820.86973 40580.15686 45859.1461 0.74238534 1.029168915 0.826732059 1.016472965 0.761730793 1.084976282 0.984758322 0.933747646 0.884886883 1 15.48492187 -6.768169504 24.99996377 0.9739758 0.888991342 0.201034558 0.100067935 310.3542761 1152846.615 0.033254284 0.029985804 1.71E-07 6.768169504 -0.084984458 TAALESNLPGSPNT(ph)SR ddPTM_A459_MK2206_30min_R2 1 TAALESNLPGSPNTSR 16 0 Q4KWH8-2;A0A2U3TZV8;Q4KWH8 Q4KWH8-2 PLCH1 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1" 1 TAALESNLPGS(0.123)PNT(0.754)S(0.123)R 114.06 0.0050589 7471000 9665.2 12026 11650 16021 11478 17124 12935 13117 10554 16546 TRUE FALSE 10405.17514 11428.80633 12038.40519 14712.03305 11027.31605 17775.66582 11236.61896 14831.43694 11471.96784 16006.10538 0.650075387 0.714027932 0.752113328 0.91915133 0.688944361 1.110555341 0.702020804 0.926611227 0.716724498 1 13.96633469 -5.367687195 1.531301419 0.861267584 0.652612768 0.250069354 0.129740039 0.685424935 2.799495027 0.036687488 0.152697648 4.29E-06 5.367687195 -0.208654816 TAANKS(ph)PCETISSPSSTLESK ddPTM_A459_MK2206_30min_R2 2 TAANKSPCETISSPSSTLESK 21 1 Q9C0D5 Q9C0D5 TANC1 Protein TANC1 1 TAANKS(0.998)PCET(0.002)ISSPSSTLESK;T(0.004)AANKS(0.992)PCET(0.004)ISSPSSTLESK 121.35 4.03E-05 39099000 79214 89044 90751 104636 93235 66567 101166 78625 69283 99124 TRUE FALSE 85278.68475 84622.20444 93776.59305 96086.90409 89574.12543 69100.25383 87882.78268 88901.55746 75309.11011 95889.592 0.889342451 0.882496241 0.977964251 1.002057701 0.934138143 0.720623087 0.916499704 0.92712416 0.785373142 1 16.54908661 -6.563913493 24.99999653 0.863735853 0.940765447 0.149495625 0.079480887 263.2717182 160393.8677 0.02609302 0.026093045 2.73E-07 6.563913493 0.077029594 TAAPS(ph)PSLLYK ddPTM_A459_MK2206_30min_R1 1 TAAPSPSLLYK 11 0 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 T(0.086)AAPS(0.457)PS(0.457)LLYK 150.14 0.00061878 18049000 6670.9 6547.1 5296.5 4669.5 5120.8 4767.3 5285 4603.1 4335.4 4272.4 TRUE FALSE 6103.504925 6120.8826 4936.988337 5029.145699 4916.827693 5037.220406 4932.447293 4562.855582 4786.080344 4801.697167 1.27111409 1.274733159 1.028175698 1.047368363 1.023977048 1.049049999 1.027229982 0.950258924 0.996747645 1 12.2293287 -5.269878002 5.711495932 1.015940775 1.275208429 0.935828515 0.02698978 0.036127778 4.766105833 0.007953188 0.018722067 5.37E-06 5.269878002 0.259267654 TAAPS(ph)PSLLYK ddPTM_A459_MK2206_30min_R2 1 TAAPSPSLLYK 11 0 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 T(0.022)AAPS(0.78)PS(0.197)LLYK 134.18 0.0016781 16905000 84974 88320 69113 87843 77378 71272 93327 67323 64840 77517 TRUE FALSE 91479.67477 83934.15723 71417.19293 80665.9459 74339.75093 73984.3059 81073.05279 76122.34725 70479.666 74987.62664 1.219930259 1.119306758 0.952386362 1.075723416 0.991360232 0.986620183 1.081152404 1.015132105 0.93988394 1 16.19436494 -4.996350851 3.449101883 1.010100643 1.213681913 0.712330473 0.043814413 0.124433761 3.031956594 0.011145935 0.050508755 1.01E-05 4.996350851 0.20358127 TAAPSPS(ph)LLYK ddPTM_A459_MK2206_30min_R1 1 TAAPSPSLLYK 11 0 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 T(0.088)AAPS(0.362)PS(0.551)LLYK 148.62 0.00064572 16789000 6564.4 6538.8 6321.1 5204.6 6097.9 4604.4 5431 4779.1 4671.3 4351.4 TRUE FALSE 6006.063309 6113.122932 5892.041344 5605.459194 5855.00773 4865.097149 5068.707899 4737.316833 5156.898351 4890.484283 1.228112179 1.250003594 1.204797113 1.146197159 1.197224526 0.994808871 1.036442938 0.968680515 1.054476009 1 12.25576162 -6.757274561 24.77902405 1.010521763 1.204444571 0.897456875 0.032852659 29.48082289 175399.2246 0.011606416 0.011210309 1.75E-07 6.757274561 0.193922807 TAAYGHFGR ddPTM_A459_MK2206_30min_R2 2 TAAYGHFGR 9 0 P31153 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 0 ; 129.42 0.0057431 14500600 112116 141040 124365 141864 157548 180582 153296 118676 147886 140095 FALSE TRUE 120699.6872 134036.1587 128511.267 130273.2574 151361.8739 187454.1745 133168.0511 134187.3607 160748.857 135523.7116 0.890616747 0.98902367 0.948256696 0.96125804 1.116866356 1.383183594 0.982618093 0.990139357 1.186130863 1 17.04818577 -6.250231155 6.477881149 1.11687038 0.949676943 0.329377575 0.113388348 0.196411651 41.52306216 0.035683788 0.044175719 5.62E-07 6.250231155 -0.167193437 TADGGEPAGASS(ph)PAGR ddPTM_A459_MK2206_30min_R1 1 TADGGEPAGASSPAGR 16 0 O76081-6 O76081-6 1 TADGGEPAGAS(0.033)S(0.967)PAGR 185.86 7.84E-07 3923100 2327.3 1823.8 1921.1 1915.6 2124.2 1934.4 2151.5 2258.4 2074 1879.1 TRUE FALSE 2129.350914 1705.070289 1790.701084 2063.139844 2039.588616 2043.924056 2007.977361 2238.655047 2289.599722 2111.897094 1.008264522 0.807364285 0.847911145 0.976913056 0.965761363 0.967814228 0.950793183 1.060020894 1.084143601 1 11.04432382 -6.866330401 0.726138066 1.047542444 0.88854668 0.432125093 0.060846675 0.640103234 0.728004167 0.046934717 0.042253027 1.36E-07 6.866330401 -0.158995764 TADGGEPAGASS(ph)PAGR ddPTM_A459_MK2206_30min_R2 1 TADGGEPAGASSPAGR 16 0 O76081-6 O76081-6 1 TADGGEPAGAS(0.144)S(0.856)PAGR 138.01 0.00040578 4671800 41502 37384 33692 35184 41979 41239 45151 35002 39705 41325 TRUE FALSE 44679.42503 35527.56492 34815.27446 32309.35465 40330.69353 42808.37904 39222.61946 39576.88158 43158.46913 39976.56863 1.117640322 0.888709715 0.870892016 0.808207301 1.008858312 1.070836755 0.981140223 0.990001967 1.079594137 1 15.28686702 -6.488979293 24.22708756 1.023086486 0.914563427 0.274312317 0.079992325 564.7045145 403580.1655 0.025291748 0.02865922 3.24E-07 6.488979293 -0.108523059 TADS(ph)VSPLEPPTKDK ddPTM_A459_MK2206_30min_R1 1 TADSVSPLEPPTKDK 15 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 T(0.108)ADS(0.587)VS(0.306)PLEPPTKDK 131.82 0.00037234 8917200 5519.9 5146.5 5494.6 5457.1 5518.2 4279.5 4383.4 5160 3622.1 2808.9 TRUE FALSE 5050.403519 4811.461915 5121.641861 5877.406788 5298.398409 4521.801592 4090.991384 5114.886664 3998.630257 3156.887738 1.599804598 1.524115621 1.622370602 1.861772504 1.678361364 1.432360593 1.295893843 1.620230774 1.266636824 1 11.62428724 -6.868173106 4.011618157 1.349327511 1.659340797 0.510252486 0.164478178 0.216190637 6.415064028 0.060079692 0.053011437 1.35E-07 6.868173106 0.310013286 TADSSS(ph)SEDEEEYVVEK ddPTM_A459_MK2206_30min_R1 1 TADSSSSEDEEEYVVEK 17 0 P45973;F8VNY3 P45973 CBX5 Chromobox protein homolog 5 1 TADSSS(0.5)S(0.5)EDEEEYVVEK 268.13 1.76E-51 23151000 2844.5 3507.1 3578.2 3055.4 3253 2981.4 3266.6 3246.3 3030.4 2706.5 TRUE FALSE 2602.560338 3278.787153 3335.321753 3290.727437 3123.426122 3150.204292 3048.691074 3217.917941 3345.420924 3041.801653 0.855598305 1.077909583 1.096495477 1.081834982 1.026834251 1.035637642 1.002264915 1.057898676 1.099815605 1 11.57071037 -4.757287668 24.99782797 1.054282486 0.855598015 0.74633141 0.034553029 64.56705511 388712.1796 0.009052408 0.068287522 1.75E-05 4.757287668 -0.198684471 TADSSSS(ph)EDEEEYVVEK ddPTM_A459_MK2206_30min_R1 1 TADSSSSEDEEEYVVEK 17 0 P45973;F8VNY3 P45973 CBX5 Chromobox protein homolog 5 1 TADS(0.002)SS(0.012)S(0.985)EDEEEYVVEK 287.91 1.28E-75 22764000 4329.8 3992 4155.7 3884.4 3868 3103.9 4450.7 4416.3 3777.4 3197.6 TRUE FALSE 3961.527773 3732.120074 3873.622662 4183.577161 3713.929369 3279.640136 4153.801924 4377.688755 4170.074248 3593.742829 1.102340363 1.03850505 1.077879761 1.164128142 1.033443278 0.912597337 1.155842842 1.21814191 1.160370802 1 11.81127146 TADSSSS(ph)EDEEEYVVEK ddPTM_A459_MK2206_30min_R2 4 TADSSSSEDEEEYVVEK 17 0 P45973;F8VNY3 P45973 CBX5 Chromobox protein homolog 5 1 TADSSS(0.017)S(0.983)EDEEEYVVEK;TADSSS(0.003)S(0.997)EDEEEYVVEK;TADS(0.002)SS(0.045)S(0.952)EDEEEYVVEK;TADS(0.009)S(0.032)S(0.323)S(0.636)EDEEEYVVEK 343.34 6.80E-155 48381700 250863 281464 266072 303598 298047 247527 306991 247778 236562 294957 TRUE FALSE 270069.2642 267486.907 274942.7077 278793.0722 286344.1772 256946.8134 266682.7129 280163.4353 257137.7352 285332.5772 0.946506939 0.937456598 0.963586809 0.977081113 1.003545336 0.900516919 0.934638153 0.9818838 0.901186039 1 18.12228495 -6.757619595 24.9999406 0.941949797 0.964591929 0.096494414 0.033367849 252.7209938 1654024.724 0.011165184 0.010756847 1.75E-07 6.757619595 0.022642132 TADSVS(ph)PLEPPTK ddPTM_A459_MK2206_30min_R1 1 TADSVSPLEPPTK 13 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 TADS(0.002)VS(0.998)PLEPPTK 229.97 4.52E-13 11183000 12106 12182 11611 9688.3 9840.8 9065.5 10572 9150.3 10448 10231 TRUE FALSE 11076.32113 11388.94959 10822.87767 10434.49454 9448.820098 9578.780776 9866.76117 9070.299892 11534.10699 11498.49352 0.963284548 0.990473193 0.941243099 0.907466228 0.821744177 0.833046586 0.858091641 0.788825064 1.003097229 1 13.48915724 -5.760429782 2.451905165 0.869750384 0.974522452 0.208103433 0.067858261 0.351545736 4.309244713 0.019309708 0.035541736 1.74E-06 5.760429782 0.104772068 TADSVS(ph)PLEPPTK ddPTM_A459_MK2206_30min_R2 2 TADSVSPLEPPTK 13 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 TADS(0.003)VS(0.997)PLEPPTK;T(0.001)ADS(0.011)VS(0.988)PLEPPT(0.001)K 176.87 0.00010242 34441000 95586 101725 95312 95094 87248 75593 97928 83498 76763 102512 TRUE FALSE 102904.1377 96673.48442 98489.65451 87324.51601 83822.20513 78469.74459 85069.93597 94411.47529 83439.70698 99167.04184 1.037684857 0.974854978 0.993169229 0.880580023 0.845262736 0.791288548 0.857844848 0.952044889 0.841405627 1 16.5975731 -5.761163034 4.824038378 0.872254495 1.001035601 0.476336865 0.057582868 0.153128282 9.368521314 0.016148719 0.026582936 1.73E-06 5.761163034 0.128781106 TADSVS(ph)PLEPPTKDK ddPTM_A459_MK2206_30min_R1 1 TADSVSPLEPPTKDK 15 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 T(0.055)ADS(0.054)VS(0.891)PLEPPTKDK 105.5 0.0025934 10253000 3056.8 2670.4 2660.3 2346.2 2930 2246.1 2672.3 2801.1 1423.2 1306.3 TRUE FALSE 2796.803108 2496.556475 2479.726248 2526.904731 2813.291896 2373.272241 2494.035743 2776.610278 1571.146733 1468.134306 1.905004942 1.700495973 1.689032289 1.72116728 1.916236058 1.61652257 1.69877901 1.891250866 1.070165534 1 10.51976824 -8.269722876 24.76099011 1.035082536 1.758590006 0.895791533 0.099862052 167.1491605 499634.345 0.088687865 0.024470924 5.37E-09 8.269722876 0.723507469 TAENATSGETLEENEAGD ddPTM_A459_MK2206_30min_R1 2 TAENATSGETLEENEAGD 18 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 ; 191.48 3.34E-09 35928000 7184.2 6689.5 6955 6369.9 7346.1 6244.3 6585.9 6185.2 5385.5 5355.4 FALSE TRUE 6573.146064 6254.012334 6482.913978 6860.510802 7053.489281 6597.84687 6146.566628 6131.123449 5945.341997 6018.867383 1.092090197 1.039067973 1.077098657 1.139834186 1.171896444 1.096194093 1.021216491 1.018650696 0.987784182 1 12.55527631 -7.298795164 3.693999656 1.005665207 1.10405151 0.659291935 0.033935904 0.174943575 5.093323494 0.017289506 0.011663771 5.03E-08 7.298795164 0.098386303 TAENATSGETLEENEAGD ddPTM_A459_MK2206_30min_R2 2 TAENATSGETLEENEAGD 18 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 ; 246.63 1.30E-31 31415000 113519 157283 136567 166855 149747 158004 163423 129988 129189 136984 FALSE TRUE 122210.1019 149472.5549 141120.0756 153222.4128 143867.1804 164016.9529 141965.3638 146977.8779 140425.6257 132514.2233 0.922241393 1.127973671 1.064942857 1.156271447 1.085673498 1.237730931 1.071321706 1.109147941 1.059702289 1 17.01578769 -4.757734637 24.98214926 1.108230676 0.922241126 0.43303983 0.061059547 94.38195697 636351.0891 0.014389533 0.104409463 1.75E-05 4.757734637 -0.185989549 TAESQT(ph)PTPSATSFFSGK ddPTM_A459_MK2206_30min_R1 4 TAESQTPTPSATSFFSGK 18 0 A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-5;P55265-3;P55265-2;P55265;P55265-4 A0A3B3ITG9 ADAR Double-stranded RNA-specific adenosine deaminase 1 TAES(0.175)QT(0.769)PT(0.04)PS(0.015)ATSFFSGK;TAES(0.001)QT(0.933)PT(0.065)PS(0.001)ATSFFSGK;TAES(0.203)QT(0.398)PT(0.398)PS(0.002)ATSFFSGK;TAESQT(0.998)PT(0.002)PSATSFFSGK 295.17 5.85E-81 55942600 13921.5 13201.8 11894.3 8773 8754.8 8411.61 7631.09 6540.19 6918.63 6850.9 TRUE FALSE 12737.40332 12342.36042 11086.94806 9448.69798 8406.077777 8887.868089 7122.03391 6483.009808 7637.846347 7699.641214 1.654285306 1.602978643 1.439930478 1.227160814 1.091749283 1.154322369 0.924982569 0.841988559 0.991974319 1 12.91057551 -5.739342486 0.689531436 0.928875547 1.779357697 0.943094865 0.064339823 0.250620527 0.199080047 0.036111754 0.139909715 1.82E-06 5.739342486 0.85048215 TAESQT(ph)PTPSATSFFSGK ddPTM_A459_MK2206_30min_R2 2 TAESQTPTPSATSFFSGK 18 0 A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-5;P55265-3;P55265-2;P55265;P55265-4 A0A3B3ITG9 ADAR Double-stranded RNA-specific adenosine deaminase 1 TAESQT(0.962)PT(0.022)PS(0.006)AT(0.009)SFFSGK;TAESQT(0.959)PT(0.041)PSATSFFSGK 196.3 4.90E-10 35343300 113874 121184 103499 111185 92661 66882 77728 52899 55815 57188 TRUE FALSE 122592.281 115166.1788 106949.605 102100.8298 89022.66356 69427.24138 67522.22023 59813.08093 60669.68781 55321.96024 2.215978618 2.081744361 1.933221537 1.845575055 1.609174063 1.254967125 1.220531954 1.081181518 1.096665547 1 15.75556466 -6.389624687 0.698191005 1.02025779 2.220865046 0.988134372 0.047291073 0.07498444 0.080357104 0.031357167 0.04883141 4.08E-07 6.389624687 1.200607256 up TAESQTPT(ph)PSATSFFSGK ddPTM_A459_MK2206_30min_R2 1 TAESQTPTPSATSFFSGK 18 0 A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-5;P55265-3;P55265-2;P55265;P55265-4 A0A3B3ITG9 ADAR Double-stranded RNA-specific adenosine deaminase 1 TAESQT(0.243)PT(0.753)PS(0.003)ATSFFSGK 114.58 0.0025361 9884000 63013 50834 47851 50663 45309 41068 35087 27217 27922 36839 TRUE FALSE 67837.32373 48309.65748 49446.32846 46523.67084 43529.941 42630.87152 30480.03475 30774.35535 30350.60509 35636.94645 1.903567238 1.355605973 1.387501831 1.305489821 1.22148347 1.196254892 0.85529311 0.863551971 0.851661214 1 15.1210861 -2.494959256 0.285932573 0.83878178 5.311248401 0.847938695 0.120757858 11.59909864 0.270065164 0.14017467 23.39755604 0.003199195 2.494959256 4.472466621 TAESQTPT(ph)PSATSFFSGKSPVTTLLECMHK ddPTM_A459_MK2206_30min_R1 1 TAESQTPTPSATSFFSGKSPVTTLLECMHK 30 1 A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-5;P55265-3;P55265-2;P55265;P55265-4 A0A3B3ITG9 ADAR Double-stranded RNA-specific adenosine deaminase 1 TAESQT(0.003)PT(0.201)PS(0.201)AT(0.201)S(0.201)FFS(0.046)GKS(0.038)PVT(0.055)T(0.055)LLECMHK 51.539 0.020474 10486000 1373.2 1414.1 1380 1310.9 1478.9 1100.4 1545.7 1529.1 1275.9 1402.2 TRUE FALSE 1256.402129 1322.041833 1286.329445 1411.865745 1419.992281 1162.703697 1442.589173 1515.73124 1408.534371 1575.915122 0.79725241 0.838904212 0.816242846 0.895902149 0.901058859 0.737795888 0.91539776 0.961810201 0.893788219 1 10.62197412 -7.504524662 23.79476982 0.944400352 0.836115439 0.54674742 0.050326808 326.9491291 423869.0085 0.02129864 0.014035704 3.13E-08 7.504524662 -0.108284913 TAESQTPTPSAT(ph)SFFSGK ddPTM_A459_MK2206_30min_R2 1 TAESQTPTPSATSFFSGK 18 0 A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-5;P55265-3;P55265-2;P55265;P55265-4 A0A3B3ITG9 ADAR Double-stranded RNA-specific adenosine deaminase 1 TAESQT(0.001)PT(0.005)PS(0.042)AT(0.921)S(0.031)FFSGK 130.69 0.0013319 23456000 39006 40125 35361 36718 30040 23948 26561 16995 20115 20708 TRUE FALSE 41992.32935 38132.45085 36539.91809 33718.02194 28860.47866 24859.35792 23073.50879 19216.30485 21864.56634 20032.29966 2.09623109 1.903548345 1.824050095 1.683182786 1.440697232 1.240963761 1.151815278 0.959266044 1.091465619 1 14.29004043 -6.267740143 0.667953382 0.983474224 2.100412894 0.983649222 0.049869176 0.092867536 0.0883552 0.031569932 0.058581147 5.40E-07 6.267740143 1.116938669 up TAESQTPTPSATSFFSGKS(ph)PVTTLLECMHK ddPTM_A459_MK2206_30min_R1 1 TAESQTPTPSATSFFSGKSPVTTLLECMHK 30 1 A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-5;P55265-3;P55265-2;P55265;P55265-4 A0A3B3ITG9 ADAR Double-stranded RNA-specific adenosine deaminase 1 TAESQTPT(0.001)PS(0.054)AT(0.054)S(0.054)FFS(0.186)GKS(0.644)PVT(0.003)T(0.004)LLECMHK 97.059 3.47E-08 3182300 1590.7 1629 1702.2 1794.9 1498.6 1301.6 1365.8 1701.9 1472.8 1440.7 TRUE FALSE 1455.402612 1522.951804 1586.659407 1933.143509 1438.907589 1375.295467 1274.689974 1687.020468 1625.90283 1619.184793 0.898848988 0.940567013 0.979912493 1.19389925 0.888661748 0.849375237 0.787241814 1.041894956 1.004149025 1 10.66105193 -3.220001043 15.37400674 0.956533447 0.534934991 0 0.108011021 0 0 0.026364318 0 0.000602558 3.220001043 -0.421598456 TAFDEAIAELDTLNEDSYK ddPTM_A459_MK2206_30min_R1 1 TAFDEAIAELDTLNEDSYK 19 0 P27348 P27348 YWHAQ 14-3-3 protein theta 0 155.03 5.94E-06 1760200 1372.3 1472.9 1943.7 1589 1093.6 922.27 1197.4 1285.9 500.93 1510.9 FALSE TRUE 1255.578679 1377.013942 1811.767059 1711.385055 1050.039596 974.4881304 1117.523631 1274.657512 553.0034661 1698.081699 0.739410053 0.810923257 1.066949288 1.007834344 0.618368125 0.573875881 0.658109461 0.750645574 0.325663639 1 10.72969016 -6.271812742 24.334395 0.638130929 0.910944527 0.320376761 0.178694284 548.8554534 1287532.326 0.054044374 0.061974493 5.35E-07 6.271812742 0.272813597 TAFDEAIAELDTLS(ph)EESYK ddPTM_A459_MK2206_30min_R1 2 TAFDEAIAELDTLSEESYK 19 0 E7EX29;P63104;B0AZS6;B7Z2E6;H0YB80;P63104-2 E7EX29;P63104-2 YWHAZ 14-3-3 protein zeta/delta 1 TAFDEAIAELDT(0.033)LS(0.958)EES(0.009)YK;TAFDEAIAELDT(0.336)LS(0.661)EES(0.003)YK 204.21 5.05E-16 9059000 2425.8 2440.6 2664.7 1752.52 1834.09 1901.81 2881.8 1828.32 3259.4 4036.3 TRUE FALSE 2219.472972 2281.716496 2483.827588 1887.499394 1761.034312 2009.488839 2689.56038 1812.335191 3598.226294 4536.347317 0.489264339 0.502985406 0.547539114 0.416083528 0.388205353 0.442975085 0.592891195 0.399514205 0.793199031 1 12.14731539 -8.457308528 3.393440815 0.997535285 0.474682706 0.884154452 0.06340899 0.066873103 1.566854214 0.062696441 0.016624388 3.49E-09 8.457308528 -0.522852578 down TAFDEAIAELDTLSEESYK ddPTM_A459_MK2206_30min_R1 1 TAFDEAIAELDTLSEESYK 19 0 E7EX29;P63104;B0AZS6;B7Z2E6;H0YB80;P63104-2 E7EX29;P63104-2 YWHAZ 14-3-3 protein zeta/delta 0 129.43 0.00043292 1720100 544.04 559.27 291.31 504.49 362.73 492.92 466.05 421.88 455.4 541.21 FALSE TRUE 497.7665411 522.8614213 271.5366888 543.3459072 348.281696 520.8287044 434.9606549 418.1915476 502.7404597 608.2591807 0.818346121 0.859603008 0.446416096 0.89328024 0.572587652 0.856261148 0.715090982 0.687521966 0.826523422 1 9.24854238 -8.588412061 3.749045573 0.999853179 0.730251534 0.280217934 0.132126199 0.375548613 14.39527111 0.119619182 0.031428947 2.58E-09 8.588412061 -0.269601644 TAFYNEDDS(ph)EEEQR ddPTM_A459_MK2206_30min_R1 4 TAFYNEDDSEEEQR 14 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 TAFYNEDDS(1)EEEQR;TAFYNEDDS(1)EEEQR;TAFYNEDDS(1)EEEQR;TAFYNEDDS(1)EEEQR 262.24 5.88E-36 42876100 5978.19 5420.4 5723.31 4971.91 5024.47 4491.63 6411.9 5019.69 5115.16 4585.15 TRUE FALSE 5469.713548 5067.530975 5334.827663 5354.84737 4824.33472 4745.942209 5984.17385 4975.80338 5646.899187 5153.192998 1.061422219 0.983376904 1.035247014 1.039131927 0.93618359 0.920971175 1.161255527 0.965576756 1.09580588 1 12.33125091 -7.23815314 24.99815577 1.052790985 0.99649719 0.171391376 0.064075454 1529.494357 1641939.639 0.02412462 0.018673615 5.78E-08 7.23815314 -0.056293795 TAFYNEDDS(ph)EEEQR ddPTM_A459_MK2206_30min_R2 4 TAFYNEDDSEEEQR 14 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 TAFYNEDDS(1)EEEQR;TAFYNEDDS(1)EEEQR;TAFYNEDDS(1)EEEQR;T(0.001)AFYNEDDS(0.999)EEEQR 234.36 7.96E-14 123374000 137860 163225 144896 161619 141393 145610 163867 122490 122758 154191 TRUE FALSE 148414.6676 155119.4839 149726.7603 148414.2107 135841.2004 151151.2906 142351.0661 138499.8636 133435.2689 149159.7603 0.995004734 1.039955304 1.003801293 0.995001671 0.910709431 1.013351659 0.954353009 0.928533696 0.894579535 1 17.18649886 -6.057441542 5.688163363 0.94995773 1.013380832 0.395623744 0.035718302 0.217414574 15.06905076 0.010689661 0.01415098 8.76E-07 6.057441542 0.063423102 TAGFPNGS(ph)LGK ddPTM_A459_MK2206_30min_R2 2 TAGFPNGSLGK 11 0 Q9NZH0;Q9NZH0-2 Q9NZH0 GPRC5B G-protein coupled receptor family C group 5 member B 1 TAGFPNGS(1)LGK;TAGFPNGS(1)LGK 99.011 0.01768 6639700 60118 27019 35270 29048 37445 37461 59567 23376 42119 58145 TRUE FALSE 64720.6803 25677.27575 36445.8842 26674.68548 35974.72115 38886.60461 51745.78135 26431.32346 45782.43449 56247.73341 1.150636237 0.456503297 0.647952939 0.47423574 0.63957637 0.691345273 0.919962072 0.46990913 0.813942744 1 15.77950734 -7.011050895 22.80694769 0.763761301 0.650816316 0.056344015 0.220899845 566.2259281 1168584.139 0.07871934 0.064901455 9.75E-08 7.011050895 -0.112944986 TAHNSEAADLEESFNEHELEPSS(ph)PK ddPTM_A459_MK2206_30min_R2 1 TAHNSEAADLEESFNEHELEPSSPK 25 0 A0A0D9SGE8;Q5JRC6;Q8IWS0-2 A0A0D9SGE8 PHF6 PHD finger protein 6 1 TAHNSEAADLEESFNEHELEPS(0.259)S(0.741)PK 141.87 1.02E-08 4445900 2923.4 13956 9522.9 18455 21119 25374 20620 11598 17251 17334 TRUE FALSE 3147.217752 13262.96533 9840.388733 16947.16747 20289.76195 26339.62535 17912.56923 13113.89842 18751.4608 16768.393 0.187687499 0.790950292 0.58684149 1.010661395 1.210000383 1.570790078 1.068234102 0.782060536 1.118262245 1 14.03345681 -5.152921253 1.001134343 1.127779055 0.137675233 0.604210672 0.223749501 0.878004349 1.055426249 0.084527379 0.82106116 7.03E-06 5.152921253 -0.990103822 TAHNSEADLEESFNEHELEPSS(ph)PK ddPTM_A459_MK2206_30min_R1 2 TAHNSEADLEESFNEHELEPSSPK 24 0 Q8IWS0-5;Q8IWS0 Q8IWS0-5 PHF6 PHD finger protein 6 1 TAHNSEADLEES(0.002)FNEHELEPS(0.121)S(0.877)PK;TAHNSEADLEES(0.005)FNEHELEPS(0.343)S(0.652)PK 109.69 2.12E-07 70684000 10843.6 5856.7 7640.3 5328.1 14889 15339.6 11956.8 9603.4 5598.7 4979.9 TRUE FALSE 9921.294878 5475.427765 7121.697723 5738.471185 14295.9396 16208.1149 11159.18369 9519.438486 6180.7049 5596.847608 1.772657677 0.978305673 1.272448032 1.025304169 2.554284233 2.895936432 1.993833756 1.700857188 1.104318955 1 12.45039875 -6.241587207 24.67342941 1.966916004 1.242635709 0.201750606 0.579440105 1030.517394 1280786.288 0.180072286 0.232128505 5.73E-07 6.241587207 -0.724280295 TAHNSEADLEESFNEHELEPSS(ph)PK ddPTM_A459_MK2206_30min_R2 4 TAHNSEADLEESFNEHELEPSSPK 24 0 Q8IWS0-5;Q8IWS0 Q8IWS0-5 PHF6 PHD finger protein 6 1 TAHNSEADLEES(0.284)FNEHELEPS(0.238)S(0.477)PK;TAHNS(0.001)EADLEES(0.324)FNEHELEPS(0.195)S(0.48)PK;TAHNSEADLEES(0.166)FNEHELEPS(0.032)S(0.802)PK;TAHNSEADLEESFNEHELEPS(0.129)S(0.871)PK 94.037 8.49E-06 120050700 149698.3 339122 234737 481187 552787 562198 538774 337817 436588 399600 TRUE FALSE 161159.3169 322281.6946 242563.0144 441872.4829 531081.8048 583592.8388 468032.3266 381970.8418 474561.6351 386561.0847 0.416905176 0.833714793 0.627489481 1.14308579 1.373862569 1.509704059 1.210759037 0.98812544 1.227649792 1 18.56033688 -5.806231735 4.523795142 1.233493177 0.642305028 0.702376818 0.173538332 0.114576504 5.04815557 0.051729814 0.081776986 1.56E-06 5.806231735 -0.591188149 TAIT(ph)TPNFK ddPTM_A459_MK2206_30min_R1 1 TAITTPNFK 9 0 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YMD2 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 T(0.001)AIT(0.5)T(0.5)PNFK 132.88 0.0076193 11897000 5115 5366.3 4737.9 4159.7 3964.8 3882.9 3465.9 3587.4 3669.4 3507.1 TRUE FALSE 4679.94239 5016.952895 4416.304549 4480.080815 3806.87362 4102.746442 3234.696135 3556.03574 4050.847261 3941.586025 1.187324686 1.272825929 1.120438453 1.136618809 0.965822792 1.0408872 0.820658515 0.902183973 1.02772012 1 11.94456055 -6.081331752 1.147685225 0.937134892 1.227503282 0.722922697 0.067721585 0.247964015 0.668469942 0.026838982 0.048401618 8.29E-07 6.081331752 0.29036839 TAIT(ph)TPNFK ddPTM_A459_MK2206_30min_R2 2 TAITTPNFK 9 0 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YMD2 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 T(0.001)AIT(0.619)T(0.38)PNFK;TAIT(0.625)T(0.375)PNFK 125.97 0.011498 14399600 228650 197384 160754 210850 166915 169064 236220 172714 138026 191766 TRUE FALSE 246155.6198 187582.1976 166113.4581 193622.8805 160361.0784 175497.849 205204.0302 195288.3128 150031.252 185508.6911 1.326922304 1.011177409 0.895448386 1.043740212 0.864439706 0.946035724 1.106169361 1.052717863 0.808755919 1 17.50112725 -4.767985751 4.256079282 0.969148911 1.358944393 0.608278246 0.086600751 0.148050297 5.471353578 0.021734401 0.178607581 1.71E-05 4.767985751 0.389795481 TAITTAS(ph)IRR ddPTM_A459_MK2206_30min_R2 1 TAITTASIRR 10 1 Q8IXS8 Q8IXS8 FAM126B Protein FAM126B 1 TAIT(0.001)T(0.075)AS(0.924)IRR 68.463 0.040979 3236000 9938 14433 12296 16031 15279 16778 12855 9048.1 12567 10588 TRUE FALSE 10698.86092 13716.27821 12705.9425 14721.21602 14679.06969 17416.49855 11167.12306 10230.71774 13660.05494 10242.51443 1.044554147 1.339151466 1.240510091 1.437265832 1.43315099 1.700412401 1.090271645 0.998848262 1.33366226 1 13.3222823 TAKPFPGSVNQPATPFS(ph)PTR ddPTM_A459_MK2206_30min_R1 1 TAKPFPGSVNQPATPFSPTR 20 1 H0Y9Y3;Q9UMS6-5;Q9UMS6;Q9UMS6-3;Q9UMS6-4;Q9UMS6-2 H0Y9Y3 SYNPO2 Synaptopodin-2 1 TAKPFPGSVNQPAT(0.026)PFS(0.724)PT(0.251)R 138.59 4.61E-05 27521000 4604.2 4238.2 4296.8 3625.4 4232.7 3577.4 3574.3 3743.7 2983.8 2425.3 TRUE FALSE 4212.588612 3962.29241 4005.145188 3904.628936 4064.102596 3779.949296 3335.864969 3710.969226 3293.976688 2725.764474 1.54547051 1.453644454 1.469365833 1.432489481 1.490995511 1.386748317 1.223827297 1.361441629 1.208459762 1 11.41244519 -8.384639234 0.305512776 0.941341801 1.544856139 0.891343969 0.052045362 0.557287137 0.168113664 0.123608909 0.080134143 4.12E-09 8.384639234 0.603514337 TALAT(ph)SPITVGDLGIVR ddPTM_A459_MK2206_30min_R1 1 TALATSPITVGDLGIVR 17 0 P13994 P13994 CCDC130 Coiled-coil domain-containing protein 130 1 T(0.002)ALAT(0.584)S(0.399)PIT(0.015)VGDLGIVR 134.88 0.0012126 4454600 1040.7 1099.7 1217.1 1113.2 1243 984.57 1275.1 971.01 703.92 1130.6 TRUE FALSE 952.1830001 1028.10933 1134.486643 1198.938857 1193.488678 1040.315503 1190.040406 962.5205619 777.095003 1270.667264 0.749356678 0.809109796 0.892827474 0.943550598 0.939261372 0.818715908 0.936547623 0.757492217 0.61156451 1 10.31137058 -10.12733131 6.721981832 1 0.837434809 0.203227774 0.100418911 1.52E-10 0 0.103010467 0.024983708 7.46E-11 10.12733131 -0.162565191 TALATS(ph)PITVGDLGIVR ddPTM_A459_MK2206_30min_R2 2 TALATSPITVGDLGIVR 17 0 P13994 P13994 CCDC130 Coiled-coil domain-containing protein 130 1 TALAT(0.056)S(0.94)PIT(0.003)VGDLGIVR;TALAT(0.003)S(0.839)PIT(0.158)VGDLGIVR 129.05 0.00096761 1198600 12774.6 17876.6 15978.4 17466.3 18957.4 15485.6 16510.7 14353.5 14786.7 17943.7 TRUE FALSE 13752.6332 16988.87404 16511.11188 16039.24742 18213.03722 16074.91536 14342.82526 16229.55173 16072.82044 17358.19854 0.792284589 0.978723339 0.951199622 0.924015668 1.04924697 0.926070486 0.826285356 0.934979036 0.925949798 1 14.08332961 -12.43753348 0.006351123 1.942176285 1.42E-06 0.078680183 0.069049657 95483.16057 67.0435719 10943.94135 9595.614968 3.65E-13 12.43753348 -1.942174866 TALIHDGLAR ddPTM_A459_MK2206_30min_R1 2 TALIHDGLAR 10 0 P25398 P25398 RPS12 40S ribosomal protein S12 0 ; 115.23 0.0094295 37284000 11842.2 11925.7 11419.4 10423.9 11579.4 10523.5 10995.8 11165.6 10119.7 9000 FALSE TRUE 10834.9587 11149.33476 10644.28294 11226.75058 11118.16798 11119.33148 10262.29024 11067.98034 11171.67903 10114.98795 1.071178608 1.102258828 1.052327793 1.109912404 1.099177581 1.099292608 1.014562775 1.09421587 1.104467854 1 13.30420698 -10.9203214 3.218199852 0.999051065 1.082762671 0.43765968 0.028238068 15182507.87 19874920.72 133117.1139 0.007324587 1.20E-11 10.9203214 0.083711606 TALIHDGLAR ddPTM_A459_MK2206_30min_R2 3 TALIHDGLAR 10 0 P25398 P25398 RPS12 40S ribosomal protein S12 0 ;; 147.73 0.0011429 39864600 155453 191758 166425 183515 180841 176647 197997 151005 159537 173535 FALSE TRUE 167354.6012 182235.5766 171973.5264 168521.2375 173740.2737 183369.4254 171999.7561 170741.872 173413.2399 167872.5672 0.996914529 1.085559003 1.024429002 1.003864064 1.034953338 1.092313226 1.024585249 1.01709216 1.03300523 1 17.35700697 -8.650604417 0.98022993 1.001001124 1.038489477 0.112222725 0.029634022 1.59258683 3.22612125 0.028666772 0.009492472 2.24E-09 8.650604417 0.037488353 TALINS(ph)TGEEVAMR ddPTM_A459_MK2206_30min_R1 1 TALINSTGEEVAMR 14 0 P02545;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 TALINS(0.913)T(0.087)GEEVAMR 123.63 0.0016006 2894100 1203.6 1195.5 1064.3 1139.4 1185.3 1206.3 1232.4 1360.7 1011.9 1592.1 TRUE FALSE 1101.2275 1117.672733 992.0582813 1227.156785 1138.086991 1274.599664 1150.188845 1348.803543 1117.090626 1789.341368 0.615437344 0.624628007 0.554426505 0.685814796 0.636036819 0.712328953 0.642800119 0.753798894 0.624302688 1 10.80521293 -14.52287875 0.199652484 2.578796324 0.595974755 0.825130649 0.049142341 51.88698362 0.511742148 32.64976048 0.111610351 3.00E-15 14.52287875 -1.982821569 TALINST(ph)GEEVAMR ddPTM_A459_MK2206_30min_R2 2 TALINSTGEEVAMR 14 0 P02545;P02545-6;P02545-5;P02545-4;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 TALINS(0.301)T(0.699)GEEVAMR;TALINS(0.322)T(0.678)GEEVAMR 149.6 0.0010219 6426900 35076 34586 33200 35272 35365 33350 37870 26151 31498 33925 TRUE FALSE 37761.44553 32868.50953 34306.87143 32390.16477 33976.39241 34619.15762 32897.62351 29569.02549 34237.6391 32818.03003 1.150631086 1.001538164 1.045366568 0.986962494 1.035296524 1.054882258 1.002425297 0.900999404 1.043256986 1 15.00220102 -2.853652336 1.600304222 1.005462413 69.55713861 0.492939584 0.042698962 562.7523885 3.996049822 0.012018627 140839.2847 0.001400708 2.853652336 68.5516762 TALPAQSAAT(ph)LPAR ddPTM_A459_MK2206_30min_R1 2 TALPAQSAATLPAR 14 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 TALPAQSAAT(1)LPAR;TALPAQSAAT(1)LPAR 186.08 0.00019162 65762000 9758.9 5138.8 4567 4885.9 4106.4 2792 4867.9 5154.5 3515.9 2430.5 TRUE FALSE 8928.854309 4804.263186 4257.004764 5262.212865 3942.833393 2950.080627 4543.171273 5109.43475 3881.390387 2731.608689 3.268716469 1.758766988 1.558424082 1.926415334 1.443410767 1.079979222 1.663185247 1.870485612 1.420917426 1 11.41553511 -4.743264511 3.239648479 1.534191668 3.60754758 0.777286568 0.282532884 0.185996193 2.773629163 0.072385579 1.030704463 1.81E-05 4.743264511 2.073355912 TALPAQSAAT(ph)LPAR ddPTM_A459_MK2206_30min_R2 1 TALPAQSAATLPAR 14 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 TALPAQS(0.001)AAT(0.999)LPAR 125.98 0.0031233 10478000 50386 39803 28734 17280 24441 25989 17203 20183 27589 19390 TRUE FALSE 54243.5909 37826.4409 29691.97722 15868.16872 23481.32353 26978.02961 14944.22544 22820.9874 29988.64135 18757.30589 2.891864707 2.016624409 1.582955324 0.845972701 1.251849475 1.438267828 0.796714919 1.216645265 1.598771248 1 14.19516501 -4.910914964 1.441099017 1.174147525 3.315336137 0.827433781 0.246667429 0.362146115 0.830646591 0.07254624 1.050237643 1.23E-05 4.910914964 2.141188613 TALPT(ph)SGSSAGELELLAGEVPAR ddPTM_A459_MK2206_30min_R2 1 TALPTSGSSAGELELLAGEVPAR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 T(0.008)ALPT(0.882)S(0.102)GS(0.008)SAGELELLAGEVPAR 136.46 3.98E-06 0 5176.8 5539.8 5911.7 6725.1 6919.1 6541.4 8715.8 5601.2 4757 6457.6 TRUE FALSE 5573.139788 5264.701588 6108.793127 6175.637817 6647.421368 6790.337561 7571.40499 6333.296072 5170.755261 6246.889041 0.892146435 0.842771747 0.97789365 0.988594127 1.064117087 1.086995065 1.21202809 1.01383201 0.827732849 1 12.60892219 -5.545773753 1.776115468 1.043864425 0.863492413 0.313281838 0.091753288 0.449248162 2.760222498 0.029523082 0.080683345 2.85E-06 5.545773753 -0.180372012 TALPTS(ph)GSSAGELELLAGEVPAR ddPTM_A459_MK2206_30min_R1 1 TALPTSGSSAGELELLAGEVPAR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 TALPT(0.004)S(0.974)GS(0.02)S(0.002)AGELELLAGEVPAR 145.19 1.58E-07 3377900 1606.2 1466.8 1777.1 1198.7 1757.3 1433.8 1981 1942.1 1400.5 1629.8 TRUE FALSE 1469.584256 1371.311053 1656.475403 1291.024082 1687.30302 1514.980517 1848.851105 1925.120424 1546.086987 1831.711928 0.802300969 0.748649955 0.904331832 0.704818297 0.92116178 0.827084485 1.009356917 1.050995189 0.844066669 1 10.83897691 -6.933002639 1.565530296 0.978017909 0.801108888 0.475858519 0.079542697 0.325771842 1.634048374 0.036401558 0.028732923 1.17E-07 6.933002639 -0.176909021 TALPTSGS(ph)SAGELELLAGEVPAR ddPTM_A459_MK2206_30min_R1 1 TALPTSGSSAGELELLAGEVPAR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 TALPTS(0.003)GS(0.498)S(0.498)AGELELLAGEVPAR 288.3 1.63E-92 6134400 1383.1 1253.4 1280 1122.1 1176 1185.6 1458.6 1015.1 1148.1 1147 TRUE FALSE 1265.460082 1171.803432 1193.117166 1208.524336 1129.15743 1252.727647 1361.299455 1006.225088 1267.449104 1289.099019 0.981662435 0.909009637 0.92554346 0.93749535 0.875927615 0.971785432 1.056008448 0.780564621 0.98320539 1 10.33214737 TALPTSGS(ph)SAGELELLAGEVPAR ddPTM_A459_MK2206_30min_R2 2 TALPTSGSSAGELELLAGEVPAR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 TALPTS(0.005)GS(0.556)S(0.439)AGELELLAGEVPAR;TALPT(0.002)S(0.011)GS(0.948)S(0.039)AGELELLAGEVPAR 125.23 1.02E-05 2347700 21075.7 24714.7 23327.1 26407.1 24267.6 25202.6 29038.5 21092.8 22236 26373.8 TRUE FALSE 22689.2718 23487.40394 24104.81387 24249.55546 23314.73209 26161.7026 25225.71007 23849.70138 24170.04709 25513.22507 0.88931414 0.920597215 0.944796818 0.950470017 0.91382928 1.025417309 0.988730747 0.934797593 0.947353658 1 14.63895766 -1.961959361 0.402212587 0.973650507 1.75E-07 0.443275364 0.029644803 52.77754822 0.989374139 0.022569531 38.86096541 0.010915425 1.961959361 -0.973650333 TALPTSGSS(ph)AGELELLAGEVPAR ddPTM_A459_MK2206_30min_R1 1 TALPTSGSSAGELELLAGEVPAR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 TALPTSGS(0.036)S(0.964)AGELELLAGEVPAR 220.16 1.29E-26 5654400 2046.3 2190.1 2101.9 1724.4 2168.9 2377 2255.1 2183.9 2220.7 2094.2 TRUE FALSE 1872.251439 2047.524092 1959.228884 1857.213587 2082.50812 2511.583686 2104.666394 2164.806393 2451.549712 2353.645306 0.795468814 0.869937406 0.832423169 0.789079638 0.88480117 1.06710373 0.894215619 0.919767472 1.041596924 1 11.20068121 -6.538187754 12.47501376 0.974133185 0.827301844 0.681566446 0.052464051 0.470758703 380.6556771 0.017142938 0.017255711 2.90E-07 6.538187754 -0.146831341 TALPTSGSS(ph)AGELELLAGEVPAR ddPTM_A459_MK2206_30min_R2 1 TALPTSGSSAGELELLAGEVPAR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 TALPTSGS(0.03)S(0.97)AGELELLAGEVPAR 242.8 5.48E-85 0 5409.9 7438.8 7557.9 8622.2 8814.6 7347 8809 6297.6 7196.8 7541.8 TRUE FALSE 5824.086104 7069.400009 7809.876614 7917.738679 8468.494514 7626.595233 7652.367718 7120.717943 7822.764655 7295.711684 0.798288962 0.968980178 1.070474952 1.085259262 1.160749613 1.045353156 1.048885709 0.976014164 1.072241475 1 12.832833 -4.823675789 2.297475915 1.060342831 0.747447281 0.736966228 0.0472418 0.285642702 1.95930553 0.013386104 0.17705476 1.50E-05 4.823675789 -0.31289555 TALPTSGSSAGELELLAGEVPARS(ph)PGAFDMSGVR ddPTM_A459_MK2206_30min_R1 5 TALPTSGSSAGELELLAGEVPARSPGAFDMSGVR 34 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 TALPTSGSSAGELELLAGEVPARS(0.992)PGAFDMS(0.008)GVR;TALPTSGSSAGELELLAGEVPARS(0.995)PGAFDMS(0.005)GVR;TALPTSGSSAGELELLAGEVPARS(0.973)PGAFDMS(0.027)GVR;TALPTSGSSAGELELLAGEVPARS(0.995)PGAFDMS(0.005)GVR;TALPTSGSSAGELELLAGEVPARS(0.997)PGAFDMS(0.003)GVR 131.7 1.80E-25 124675900 5789.56 5419.39 5709.83 5889.4 6355.49 4705.53 3813.1 5451.16 2951.45 1847.59 TRUE FALSE 5297.12752 5066.586726 5322.262648 6343.002608 6102.337375 4971.953042 3558.735056 5403.501083 3258.263789 2076.483398 2.551008848 2.439984221 2.563113509 3.054684962 2.938784573 2.394410207 1.71382784 2.602236593 1.569125856 1 11.01992662 -8.392038394 0.629188539 0.98799641 2.690264053 0.71875211 0.326678368 0.442845895 0.414097959 0.348415944 0.152537024 4.05E-09 8.392038394 1.702267644 TALPTSGSSAGELELLAGEVPARS(ph)PGAFDMSGVR ddPTM_A459_MK2206_30min_R2 4 TALPTSGSSAGELELLAGEVPARSPGAFDMSGVR 34 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 TALPTSGSSAGELELLAGEVPARS(0.994)PGAFDMS(0.006)GVR;TALPTSGSSAGELELLAGEVPARS(0.985)PGAFDMS(0.014)GVR;TALPTSGSSAGELELLAGEVPARS(0.858)PGAFDMS(0.142)GVR;TALPTSGSSAGELELLAGEVPARS(1)PGAFDMSGVR 95.141 1.15E-10 31315100 21122.5 65909.7 41961.5 58699 65194.9 62761.3 52856.8 39027.9 64192.5 36203.9 TRUE FALSE 22739.65484 62636.72014 43360.47547 53903.10393 62635.02065 65149.72525 45916.63867 44128.98053 69775.84762 35022.56971 0.649285733 1.788467284 1.238072358 1.539096199 1.788418759 1.86022116 1.311058527 1.260015496 1.992310907 1 15.09599732 -4.75156365 24.98969577 1.541558266 0.649283926 0.425126099 0.307314171 383.4978111 970341.612 0.073619231 0.960465906 1.77E-05 4.75156365 -0.89227434 TALPTSGSSAGELELLAGEVPARSPGAFDMS(ph)GVR ddPTM_A459_MK2206_30min_R2 1 TALPTSGSSAGELELLAGEVPARSPGAFDMSGVR 34 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 TALPTSGSSAGELELLAGEVPARS(0.463)PGAFDMS(0.536)GVR 68.961 4.87E-05 12808000 6541.2 13921 7800.4 14753 17854 12588 10999 10197 12168 8085 TRUE FALSE 7041.999301 13229.70338 8060.461443 13547.63271 17152.96225 13067.04516 9554.818088 11529.78291 13226.35065 7821.187112 0.900374739 1.691521145 1.030593096 1.732170899 2.193140505 1.670724018 1.221658292 1.474173005 1.691092472 1 12.93317188 -3.590896041 13.78638487 1.495286819 1.410480315 0 0.392584748 0 0 0.090255515 0 0.00025651 3.590896041 -0.084806504 TAMPS(ph)PGVSQNK ddPTM_A459_MK2206_30min_R1 2 TAMPSPGVSQNK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 T(0.02)AMPS(0.949)PGVS(0.031)QNK;T(0.001)AMPS(0.994)PGVS(0.006)QNK 151.13 0.0053573 3386400 5575.6 5766.3 5692.3 4161 4485.8 4449.2 4503.3 4075.6 4753.1 5471.3 TRUE FALSE 5101.365941 5390.912822 5305.922536 4481.480941 4307.121087 4701.109859 4202.893074 4039.967459 5247.201754 6149.12595 0.829608302 0.876695788 0.862874265 0.728799666 0.700444441 0.764516762 0.683494387 0.656998652 0.853324813 1 12.58616564 -5.756521578 24.98748176 0.748674597 0.858423116 0.122609625 0.095354707 180.7399031 918330.7665 0.024607926 0.040963068 1.75E-06 5.756521578 0.10974852 TAMPS(ph)PGVSQNK ddPTM_A459_MK2206_30min_R2 7 TAMPSPGVSQNK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 T(0.001)AMPS(0.962)PGVS(0.037)QNK;TAMPS(0.987)PGVS(0.013)QNK;T(0.005)AMPS(0.828)PGVS(0.166)QNK;TAMPS(0.919)PGVS(0.081)QNK;TAMPS(0.947)PGVS(0.053)QNK;T(0.053)AMPS(0.946)PGVS(0.001)QNK;T(0.105)AMPS(0.892)PGVS(0.003)QNK 148.89 0.002241 82836000 250211 230702 221605 234843 224843 184037 243224 176801 179696 250851 TRUE FALSE 269367.3465 219245.6742 228993.2001 215655.5757 216014.5341 191040.657 211288.3966 199909.4977 195325.6333 242665.7524 1.110034456 0.903488325 0.943656852 0.888693907 0.890173137 0.787258421 0.870697223 0.823805979 0.804916356 1 17.88861099 -1.522878748 0.732748872 0.854732974 38.64599457 0.568862268 0.060401434 231.0558777 1.072413224 0.021807567 14379.44574 0.03 1.522878748 37.7912616 TAMSTPHVAEPAENEQDEQDENGAEASADLR ddPTM_A459_MK2206_30min_R2 1 TAMSTPHVAEPAENEQDEQDENGAEASADLR 31 0 P26038 P26038 MSN Moesin 0 74.029 5.55E-05 7453800 18439 32323 30602 34950 28021 31075 36299 22762 33276 24166 FALSE TRUE 19850.70402 30717.88682 31622.25541 32094.4732 26920.75475 32257.5809 31532.8977 25737.07155 36170.28633 23377.4654 0.849138419 1.313995606 1.352681091 1.372880792 1.151568585 1.379857925 1.348858705 1.100935072 1.54722874 1 14.5128309 -4.759882163 24.97356647 1.294087577 0.849137864 0.427302887 0.151189236 34.80201256 557947.0296 0.034315524 0.211377366 1.74E-05 4.759882163 -0.444949713 TANDMIHAENMR ddPTM_A459_MK2206_30min_R1 1 TANDMIHAENMR 12 0 P26038 P26038 MSN Moesin 0 104.81 0.013472 4809300 3533.4 3713.7 3131.9 2878.5 3713.2 3720.6 4107 3060.9 3585.6 4007.1 FALSE TRUE 3232.865775 3471.937455 2919.315354 3100.202569 3565.295381 3931.257157 3833.029524 3034.138874 3958.335951 4503.5298 0.717851534 0.770936934 0.648228275 0.688393928 0.791666879 0.872927977 0.851116723 0.673724614 0.87894077 1 12.13684049 -6.426345108 4.076163561 0.834679808 0.707500301 0.419257861 0.080697354 0.267474779 7.866773534 0.025804295 0.029052141 3.75E-07 6.426345108 -0.127179506 TANDMIHAENMR ddPTM_A459_MK2206_30min_R2 2 TANDMIHAENMR 12 0 P26038 P26038 MSN Moesin 0 ; 109.44 0.010731 13668300 119351 149184 131744 158654 119708 138390 145658 110636 130215 134103 FALSE TRUE 128488.6043 141775.7395 136136.2792 145691.4607 115007.6624 143656.5284 126532.9296 125096.5051 141540.8653 129727.2301 0.990452076 1.092875716 1.049404039 1.123059982 0.88653448 1.107373744 0.975376793 0.96430414 1.091065193 1 16.98512181 TANS(ph)PGSGARPDPVR ddPTM_A459_MK2206_30min_R1 1 TANSPGSGARPDPVR 15 1 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 TANS(0.846)PGS(0.154)GARPDPVR 125.96 0.0056211 29959000 2514.2 2503.2 2590.4 1889.6 2301.4 2044.8 2439.4 1966.3 1725.6 1968.5 TRUE FALSE 2300.354087 2340.241225 2414.570865 2035.137319 2209.730365 2160.574809 2276.672077 1949.108846 1904.982295 2212.372641 1.039767914 1.057797037 1.091394289 0.919889028 0.998805682 0.976587203 1.029063565 0.881003864 0.861058512 1 11.11137869 -6.144257402 0.572498075 0.926821769 1.076386553 0.371531718 0.057418969 1.241685484 0.79744522 0.043206695 0.1021904 7.17E-07 6.144257402 0.149564784 TANSPGS(ph)GARPDPVR ddPTM_A459_MK2206_30min_R1 2 TANSPGSGARPDPVR 15 1 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 T(0.002)ANS(0.222)PGS(0.777)GARPDPVR;T(0.01)ANS(0.215)PGS(0.775)GARPDPVR 114.54 0.011825 14329000 3396.6 3307.6 3523.9 3239.7 3203.8 3206.6 3086.9 3009.2 2814.2 2540.3 TRUE FALSE 3107.701334 3092.274639 3284.707486 3489.222255 3076.185862 3388.154921 2880.978533 2982.890882 3106.746161 2855.011542 1.08850745 1.083104076 1.150505852 1.222139457 1.0774688 1.186739483 1.009095232 1.044791181 1.08817289 1 11.47928086 -7.269666577 24.95958632 1.039247422 1.134482434 0.500277218 0.048527565 561.6735151 1703991.376 0.0204885 0.014062166 5.37E-08 7.269666577 0.095235012 TANSPGS(ph)GARPDPVR ddPTM_A459_MK2206_30min_R2 2 TANSPGSGARPDPVR 15 1 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 T(0.001)ANS(0.132)PGS(0.867)GARPDPVR;T(0.004)ANS(0.333)PGS(0.663)GARPDPVR 126.91 0.0052297 35121000 25676 27684 24700 27176 31200 25774 28172 20576.4 20054.3 25842 TRUE FALSE 27641.7743 26309.25282 25523.48567 24955.63387 29974.93123 26754.84763 24472.98256 23265.80613 21798.58676 24998.77766 1.105725035 1.052421569 1.020989347 0.998274164 1.199055876 1.070246234 0.978967168 0.930677749 0.871986105 1 14.60956993 -7.426097215 3.008405924 0.928113283 1.073169764 0.547619665 0.058383393 0.211449813 3.681136707 0.029491008 0.017951921 3.75E-08 7.426097215 0.145056481 TAPAAPAEDAVAAAAAAPS(ph)EPSEPSRPSPQPKPR ddPTM_A459_MK2206_30min_R2 1 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPR 34 2 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPS(0.305)EPS(0.305)EPS(0.273)RPS(0.117)PQPKPR 84.878 8.54E-09 62300000 50222 66757 68281 67499 69433 57090 75076 52120 68669 63292 TRUE FALSE 54067.03493 63441.94445 70557.45446 61984.11578 66706.71155 59262.59995 65218.43102 58932.26295 74641.70549 61226.78722 0.883061767 1.036179544 1.15239518 1.012369236 1.089502072 0.967919478 1.065194402 0.962524177 1.21910211 1 15.90187536 -4.772942816 4.842796049 1.056114748 0.872736689 0.317554295 0.076604008 0.19782825 11.44907382 0.017917449 0.121917246 1.69E-05 4.772942816 -0.183378059 TAPAAPAEDAVAAAAAAPSEPS(ph)EPSRPSPQPKPR ddPTM_A459_MK2206_30min_R1 1 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPR 34 2 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPS(0.004)EPS(0.46)EPS(0.268)RPS(0.268)PQPKPR 103.21 3.37E-12 69255000 4532.3 4332.7 5550.9 4903.4 4376.3 4844.1 5391.2 5065.1 3990.5 3380.2 TRUE FALSE 4146.804085 4050.640442 5174.120374 5281.060718 4201.982704 5118.368756 5031.562885 5020.816365 4405.326755 3798.964695 1.091561627 1.066248509 1.361981695 1.39013156 1.106086274 1.347306218 1.324456342 1.32162754 1.159612449 1 11.89139059 -5.24546607 24.66854033 1.26868622 1.07890502 0.235980819 0.120994095 850.5280993 1313515.019 0.029349993 0.077073472 5.68E-06 5.24546607 -0.1897812 TAPAAPAEDAVAAAAAAPSEPS(ph)EPSRPSPQPKPR ddPTM_A459_MK2206_30min_R2 1 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPR 34 2 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPS(0.247)EPS(0.289)EPS(0.232)RPS(0.232)PQPKPR 94.96 2.46E-11 62965000 42274 61338 43660 53113 55185 44268 50085 42640 60195 43863 TRUE FALSE 45510.52994 58292.04411 45115.60261 48773.498 53018.15962 45952.64976 43508.77934 48213.19441 65430.65229 42431.7539 1.072558303 1.373783517 1.063250949 1.149457506 1.249492532 1.082977853 1.025382534 1.136252687 1.542020922 1 15.37285669 TAPAAPAEDAVAAAAAAPSEPSEPS(ph)RPSPQPKPR ddPTM_A459_MK2206_30min_R2 1 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPR 34 2 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPS(0.002)EPS(0.06)EPS(0.79)RPS(0.148)PQPKPR 115.34 5.03E-19 20045000 29850 38376 39590 42449 43891 40782 49271 33747 38072 36997 TRUE FALSE 32135.33895 36470.30364 40909.91084 38980.78091 42167.61881 42333.98759 42801.65851 38157.84877 41383.43374 35789.79092 0.897891218 1.019014158 1.143060906 1.089159224 1.178202435 1.182850933 1.195918093 1.066165736 1.156291576 1 15.1272605 -4.897447727 1.845300523 1.135482019 0.851571829 0.602071517 0.058281932 0.408877143 1.764272156 0.01551631 0.188146483 1.27E-05 4.897447727 -0.28391019 TAPAAPAEDAVAAAAAAPSEPSEPSRPS(ph)PQPK ddPTM_A459_MK2206_30min_R1 3 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPK 32 1 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPS(0.009)EPS(0.028)EPS(0.115)RPS(0.848)PQPK;TAPAAPAEDAVAAAAAAPSEPS(0.007)EPS(0.028)RPS(0.965)PQPK;TAPAAPAEDAVAAAAAAPSEPS(0.002)EPS(0.036)RPS(0.962)PQPK 170.18 1.08E-32 21812000 8674.8 9620.1 10023.4 7771.4 7158.6 8280.8 9094.1 7964.8 11233.5 12954.3 TRUE FALSE 7936.962707 8993.829741 9343.039535 8369.954575 6873.457803 8749.65174 8487.449182 7895.164593 12401.26252 14559.17648 0.545151899 0.617743026 0.641728572 0.574892033 0.472104848 0.600971611 0.582962175 0.542280987 0.85178324 1 13.82964113 -8.420493388 3.218879051 0.996590747 0.57382505 0.908591226 0.045912948 0.064712896 1.259232118 0.046574491 0.012441124 3.80E-09 8.420493388 -0.422765696 TAPAAPAEDAVAAAAAAPSEPSEPSRPS(ph)PQPK ddPTM_A459_MK2206_30min_R2 3 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPK 32 1 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPSEPS(0.017)EPS(0.249)RPS(0.734)PQPK;TAPAAPAEDAVAAAAAAPSEPS(0.002)EPS(0.054)RPS(0.944)PQPK;TAPAAPAEDAVAAAAAAPSEPS(0.012)EPS(0.043)RPS(0.945)PQPK 175.34 8.30E-31 49587000 215586 178862 188065 195642 158109 130434 227144 186218 140770 229675 TRUE FALSE 232091.4299 169979.9732 194334.9932 179657.4228 151900.8462 135397.7573 197319.72 210557.332 153013.9201 222180.7236 1.044606509 0.765052748 0.874670809 0.808609405 0.683681481 0.60940371 0.888104588 0.947684968 0.68869125 1 17.76137413 -10.55890926 15.04775541 0.999995783 0.809080121 0.167424135 0.125402786 0 0 0.123503898 0.029954095 2.76E-11 10.55890926 -0.190915661 TAPAAPAEDAVAAAAAAPSEPSEPSRPS(ph)PQPKPR ddPTM_A459_MK2206_30min_R1 1 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPR 34 2 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPSEPS(0.095)EPS(0.056)RPS(0.849)PQPKPR 155.04 2.21E-29 66272000 2175.6 2513.4 1907.1 2272.3 2264.6 2083.3 2175.7 2362.1 2004.2 1752.1 TRUE FALSE 1990.553795 2349.777203 1777.651365 2447.31294 2174.396187 2201.254646 2030.563023 2341.448409 2212.543762 1969.163376 1.010862694 1.193287074 0.902744479 1.242818636 1.104223354 1.117862882 1.031180575 1.189057464 1.123595832 1 10.9433671 -5.77502199 24.99996501 1.119522477 1.051396909 0.127021786 0.092872933 515.704539 949197.3294 0.024836873 0.037064271 1.68E-06 5.77502199 -0.068125569 TAPAAPAEDAVAAAAAAPSEPSEPSRPS(ph)PQPKPR ddPTM_A459_MK2206_30min_R2 4 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPR 34 2 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPSEPS(0.002)EPS(0.081)RPS(0.916)PQPKPR;TAPAAPAEDAVAAAAAAPS(0.001)EPS(0.028)EPS(0.309)RPS(0.662)PQPKPR;TAPAAPAEDAVAAAAAAPS(0.003)EPS(0.017)EPS(0.242)RPS(0.738)PQPKPR;TAPAAPAEDAVAAAAAAPS(0.002)EPS(0.005)EPS(0.107)RPS(0.886)PQPKPR 127.49 2.64E-25 64331100 54714 80504.9 69896.6 73463.4 81309.7 70537 81829.8 59018.4 76903.3 69402.2 TRUE FALSE 58902.94591 76507.14373 72226.91776 67461.20522 78117.07263 73221.33496 71085.44896 66732.30752 83592.21002 67137.6119 0.877346457 1.139557121 1.075804094 1.004819852 1.163536659 1.09061572 1.058802167 0.99396308 1.245087629 1 16.0348336 -4.75195596 24.93990093 1.084503142 0.877346034 0.40460346 0.075845842 365.2335765 960436.9175 0.017799013 0.222499623 1.77E-05 4.75195596 -0.207157107 TAPPALPT(ph)GYDSEEEEESRPMSYDEK ddPTM_A459_MK2206_30min_R2 2 TAPPALPTGYDSEEEEESRPMSYDEK 26 1 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440-4;P25440-3;P25440;P25440-2;A0A0G2JHN8;A0A140T9I1 H0Y6K2 BRD2 Bromodomain-containing protein 2 1 TAPPALPT(0.488)GY(0.418)DS(0.094)EEEEESRPMSYDEK;TAPPALPT(0.362)GY(0.318)DS(0.318)EEEEES(0.001)RPMS(0.001)Y(0.001)DEK 72.99 0.00054708 19369100 59601 58530 62111 70782 63465 56842 74284 59387 49405 65513 TRUE FALSE 64164.09839 55623.48531 64181.74974 64998.88418 60973.04521 59005.16214 64530.42157 67149.08481 53702.1576 63375.31618 1.012446206 0.877683752 1.012724726 1.025618302 0.962094533 0.931043278 1.018226424 1.059546348 0.847367096 1 15.95163342 -5.345403256 24.9532072 0.984513919 0.945021723 0.049998742 0.063830379 229.576212 68223.63289 0.016153447 0.033626083 4.51E-06 5.345403256 -0.039492197 TAPPALPTGYDS(ph)EEEEESRPMSYDEK ddPTM_A459_MK2206_30min_R2 2 TAPPALPTGYDSEEEEESRPMSYDEK 26 1 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440-4;P25440-3;P25440;P25440-2;A0A0G2JHN8;A0A140T9I1 H0Y6K2 BRD2 Bromodomain-containing protein 2 1 TAPPALPT(0.191)GY(0.17)DS(0.619)EEEEES(0.006)RPMS(0.007)Y(0.007)DEK;TAPPALPT(0.129)GY(0.11)DS(0.761)EEEEESRPMSYDEK 92.29 0.001296 14888000 59098 59429 56685 65680 56327 50833 64908 58600 46066 63453 TRUE FALSE 63622.58832 56477.84228 58574.84961 60313.7339 54115.31896 52767.48544 56385.50163 66259.2212 50072.73741 61382.53381 1.036493354 0.920096301 0.954259233 0.982587882 0.881607773 0.859649841 0.918591953 1.079447476 0.815748949 1 15.90554058 -4.756364822 24.83224926 0.934753509 1.036493526 0.15476603 0.071389913 284.3075617 1391081.854 0.017265606 0.140593534 1.75E-05 4.756364822 0.101740016 TAPPALPTGYDS(ph)EEEEESRPMSYDEKR ddPTM_A459_MK2206_30min_R1 1 TAPPALPTGYDSEEEEESRPMSYDEKR 27 2 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440-4;P25440-3;P25440;P25440-2;A0A0G2JHN8;A0A140T9I1 H0Y6K2 BRD2 Bromodomain-containing protein 2 1 TAPPALPT(0.056)GY(0.16)DS(0.784)EEEEESRPMSYDEKR 107.92 1.95E-09 4075600 392.13 436.99 337.09 288.53 573.14 394.29 383.18 373.93 244.41 332.49 TRUE FALSE 358.7772843 408.5418716 314.20927 310.7526306 550.3106202 416.6143591 357.6187614 370.6607694 269.8172941 373.6813714 0.96011552 1.093289371 0.840848097 0.831597865 1.472673412 1.114891967 0.957015224 0.991916638 0.722051766 1 8.545664835 -7.864740814 2.388029377 0.865759955 1.048666017 0.121137522 0.182686882 0.657810364 7.311558181 0.137871707 0.054122596 1.37E-08 7.864740814 0.182906063 TAPPAS(ph)PEAR ddPTM_A459_MK2206_30min_R1 4 TAPPASPEAR 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TAPPAS(1)PEAR;T(0.005)APPAS(0.995)PEAR;TAPPAS(1)PEAR;TAPPAS(1)PEAR 142.19 0.0012261 440842000 13237.6 12047.5 12366.2 11236.8 13050.1 11640.4 12680.5 11440 9524.4 9342.4 TRUE FALSE 12111.67261 11263.20556 11526.8168 12102.26028 12530.28688 12299.46939 11834.60698 11339.98129 10514.49546 10499.80704 1.153513827 1.072705957 1.09781225 1.152617399 1.193382586 1.171399564 1.12712614 1.080018065 1.001398923 1 13.3580752 -8.057542264 2.211383246 0.997089008 1.138688062 0.739521114 0.032603024 0.188412623 1.670017546 0.032042775 0.010404156 8.76E-09 8.057542264 0.141599054 TAPPAS(ph)PEAR ddPTM_A459_MK2206_30min_R2 3 TAPPASPEAR 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TAPPAS(1)PEAR;TAPPAS(1)PEAR;TAPPAS(1)PEAR 131.12 0.0026642 418950000 1104710 1157460 1059970 1202950 1221930 1149350 1147140 942620 1012360 1249130 TRUE FALSE 1189287.447 1099982.22 1095308.871 1104665.137 1173950.888 1193089.32 996519.14 1065823.67 1100413.243 1208370.99 0.984207215 0.910301744 0.906434265 0.914177141 0.971515286 0.987353494 0.824679794 0.882033481 0.910658442 1 20.20463202 -7.241602769 24.97637611 0.894512368 0.942017989 0.130611782 0.049166264 1435.945486 1808008.414 0.018738592 0.014493767 5.73E-08 7.241602769 0.047505621 TAPQT(ph)PVLQK ddPTM_A459_MK2206_30min_R2 4 TAPQTPVLQK 10 0 Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746 Q15746-4 MYLK "Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form" 1 T(0.001)APQT(0.999)PVLQK;T(0.012)APQT(0.988)PVLQK;TAPQT(1)PVLQK;T(0.395)APQT(0.605)PVLQK 115.37 0.015593 20450000 145836 135926 125608 160317 164515 143772 160028 114868 121872 168484 TRUE FALSE 157001.3163 129176.1125 129795.708 147218.5883 158055.3145 149243.3442 139016.1314 129881.642 132472.2063 162986.3809 0.963278744 0.792557708 0.796359225 0.903256993 0.969745531 0.915679846 0.852930967 0.796886472 0.812780832 1 17.31439189 -4.722706469 23.43053305 0.867357882 0.963280729 0.129535279 0.071056182 7234.902372 4375959.429 0.018589515 4.794995029 1.89E-05 4.722706469 0.095922846 TAPS(ph)PLVEAK ddPTM_A459_MK2206_30min_R1 2 TAPSPLVEAK 10 0 Q8TEH3;Q8TEH3-7;Q8TEH3-6;A0A0A0MS48;Q8TEH3-4;Q8TEH3-3;Q8TEH3-5;Q8TEH3-2 Q8TEH3 DENND1A DENN domain-containing protein 1A 1 T(0.001)APS(0.999)PLVEAK;T(0.024)APS(0.976)PLVEAK 166.24 0.00033229 50551000 12929.5 13993.9 13559.8 12620.2 13584.2 11984.6 15266.6 12738.2 16201.8 15305 TRUE FALSE 11829.77813 13082.89457 12639.39856 13592.20999 13043.11255 12663.1577 14248.19297 12626.83126 17886.03509 17201.09895 0.687733857 0.76058481 0.734801805 0.79019428 0.758272049 0.736183062 0.828330388 0.734071195 1.039819325 1 14.07021312 -8.261788899 24.99974508 1.019909696 0.756629354 0.895417313 0.036371328 8.614996108 616062.1792 0.028006798 0.008939242 5.47E-09 8.261788899 -0.263280342 TAPS(ph)PLVEAK ddPTM_A459_MK2206_30min_R2 3 TAPSPLVEAK 10 0 Q8TEH3;Q8TEH3-7;Q8TEH3-6;A0A0A0MS48;Q8TEH3-4;Q8TEH3-3;Q8TEH3-5;Q8TEH3-2 Q8TEH3 DENND1A DENN domain-containing protein 1A 1 T(0.204)APS(0.796)PLVEAK;T(0.143)APS(0.857)PLVEAK;T(0.202)APS(0.798)PLVEAK 138.89 0.0015869 63762000 479709 593374 565981 638410 488094 523112 622574 549298 504809 633345 TRUE FALSE 516435.8899 563907.91 584850.5241 586249.8608 468928.9771 543019.3937 540829.286 621093.1346 548716.3743 612679.0045 0.842914293 0.920396987 0.954579021 0.956862985 0.765374647 0.886303251 0.88272861 1.013733342 0.895601727 1 19.22477189 -7.740438031 24.93710138 0.966000655 0.888884454 0.286022841 0.059776886 320.2759725 380297.9584 0.029158109 0.016811953 1.82E-08 7.740438031 -0.077116201 TAPSS(ph)PLTSPSDTR ddPTM_A459_MK2206_30min_R1 2 TAPSSPLTSPSDTR 14 0 A0A087WVA8;Q8IWB9;Q8IWB9-2 A0A087WVA8 TEX2 Testis-expressed sequence 2 protein 1 TAPS(0.188)S(0.811)PLT(0.001)SPSDTR;TAPS(0.038)S(0.955)PLT(0.006)SPS(0.001)DTR 203.74 3.19E-05 12748100 9015.5 8840.8 8722.9 7608.9 8744 7726.2 8368.2 8379.5 7336.7 6697.1 TRUE FALSE 8248.684383 8265.262313 8130.813851 8194.938796 8395.707964 8163.650767 7809.972647 8306.238915 8099.37622 7526.787309 1.095910386 1.09811291 1.080250247 1.088769811 1.115443764 1.084612921 1.037623667 1.103557012 1.076073481 1 12.87781849 -14.52287875 0.220344932 0.55656662 1.097597558 0.666934576 0.018845572 95.38966126 0.951941511 18.75467749 0.037061076 3.00E-15 14.52287875 0.541030938 TAPSS(ph)PLTSPSDTR ddPTM_A459_MK2206_30min_R2 2 TAPSSPLTSPSDTR 14 0 A0A087WVA8;Q8IWB9;Q8IWB9-2 A0A087WVA8 TEX2 Testis-expressed sequence 2 protein 1 T(0.001)APS(0.047)S(0.86)PLT(0.04)S(0.012)PS(0.04)DTR;TAPS(0.301)S(0.697)PLT(0.001)SPS(0.001)DTR 175.01 7.53E-05 12909300 58558 56302 54111 56883 59882 71995 65921 44359 57564 61529 TRUE FALSE 63041.2455 53506.12455 55915.03373 52235.47694 57530.7318 74734.82017 57265.49351 50156.87361 62570.81267 59521.31377 1.059137333 0.898940584 0.939411955 0.877592809 0.966556821 1.255597624 0.962100631 0.842670809 1.05123373 1 15.86111875 -4.69774211 21.89298977 0.975820219 1.059148493 0.048125624 0.109286196 30308.85287 10411273.3 0.028642348 70.76854405 2.01E-05 4.69774211 0.083328274 TAPTALGITLSS(ph)SPTSTPELR ddPTM_A459_MK2206_30min_R1 1 TAPTALGITLSSSPTSTPELR 21 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 TAPTALGITLSS(0.635)S(0.358)PT(0.007)STPELR 273.77 2.73E-60 114440000 3524.8 3627 3543.2 2695.1 3331.1 3236.5 3373.6 3300 3115.8 2676.1 TRUE FALSE 3224.997251 3390.881641 3302.697456 2902.677069 3198.415233 3419.747833 3148.553299 3271.148448 3439.69856 3007.635472 1.072269988 1.127424408 1.098104304 0.965102685 1.06343181 1.137022045 1.04685336 1.087614666 1.143655404 1 11.55441401 TAPTALGITLSS(ph)SPTSTPELR ddPTM_A459_MK2206_30min_R2 1 TAPTALGITLSSSPTSTPELR 21 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 TAPTALGITLSS(0.766)S(0.231)PT(0.003)STPELR 201.18 9.22E-17 49306000 32319 43510 37798 45551 39575 37941 42122 32949 33820 37299 TRUE FALSE 34793.36749 41349.35667 39058.16645 41829.33759 38021.08665 39384.87134 36591.3308 37255.54743 36761.60247 36081.93668 0.964287693 1.145984957 1.082485311 1.159287484 1.053742957 1.091539838 1.014117704 1.032526268 1.018836732 1 15.13898916 -7.260778472 24.99999941 1.019080696 1.087885703 0.290255169 0.050525239 76.2069417 2882738.068 0.019364571 0.01411694 5.49E-08 7.260778472 0.068805007 TAPTALGITLSSS(ph)PTSTPELR ddPTM_A459_MK2206_30min_R1 3 TAPTALGITLSSSPTSTPELR 21 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 TAPTALGITLSS(0.026)S(0.972)PT(0.002)STPELR;TAPTALGITLSS(0.153)S(0.768)PT(0.073)S(0.007)TPELR;TAPTALGITLSS(0.223)S(0.763)PT(0.014)STPELR 313.74 2.45E-118 110589000 5436.47 4996.49 5834.3 5240.09 5488.2 5299.47 5362.15 5459.91 4944.47 4446.38 TRUE FALSE 4974.069678 4671.217593 5438.283971 5643.68264 5269.593373 5599.521412 5004.450757 5412.174583 5458.46535 4997.231123 0.995365144 0.934761166 1.088259446 1.129361941 1.054502632 1.120524801 1.001444727 1.083034674 1.092297958 1 12.28691323 -5.26684228 24.99519995 1.074898121 0.965063152 0.487116848 0.043420172 307.3264042 1421777.046 0.010893987 0.023808964 5.41E-06 5.26684228 -0.109834968 TAPTALGITLSSS(ph)PTSTPELR ddPTM_A459_MK2206_30min_R2 3 TAPTALGITLSSSPTSTPELR 21 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 TAPTALGITLSS(0.205)S(0.794)PTSTPELR;TAPTALGITLS(0.001)S(0.111)S(0.412)PT(0.176)S(0.269)T(0.032)PELR;TAPTALGITLSS(0.148)S(0.846)PT(0.005)S(0.001)TPELR 342.02 4.51E-175 132027000 147281 183192 148445 176331 158052 187608 173249 126703 166027 175706 TRUE FALSE 158556.9466 174094.9517 153394.0822 161924.1932 151846.0843 194747.5539 150501.1982 143263.5171 180467.7284 169972.7276 0.932837572 1.024252267 0.902462909 0.952648084 0.893355578 1.145757656 0.885443214 0.842861788 1.061745204 1 17.37494376 TAPTLS(ph)PEHWK ddPTM_A459_MK2206_30min_R1 5 TAPTLSPEHWK 11 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TAPT(0.011)LS(0.989)PEHWK;T(0.001)APT(0.014)LS(0.985)PEHWK;T(0.003)APT(0.31)LS(0.687)PEHWK;T(0.002)APT(0.156)LS(0.843)PEHWK;T(0.005)APT(0.08)LS(0.915)PEHWK 170.95 0.00033394 234868000 21611.7 21139.9 21181.7 20224 19464.7 16899.5 19600 20089.5 18910.7 16556.3 TRUE FALSE 19773.51143 19763.68867 19743.94522 21781.65598 18689.37978 17856.33509 18292.51976 19913.85962 20876.53494 18607.41944 1.06266812 1.062140225 1.061079173 1.170589831 1.004404713 0.959635222 0.983076661 1.070210713 1.121946813 1 14.18359037 TAPTLS(ph)PEHWK ddPTM_A459_MK2206_30min_R2 8 TAPTLSPEHWK 11 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TAPT(0.254)LS(0.746)PEHWK;T(0.028)APT(0.08)LS(0.892)PEHWK;TAPT(0.217)LS(0.783)PEHWK;TAPT(0.038)LS(0.962)PEHWK;TAPT(0.011)LS(0.989)PEHWK;TAPTLS(1)PEHWK;T(0.001)APT(0.017)LS(0.982)PEHWK;TAPT(0.009)LS(0.991)PEHWK 150.49 0.00061272 339375900 413196 448527 407544 463383 434785 354724 505732 366793 346915 439810 TRUE FALSE 444830.6035 426253.8014 421131.3136 425523.1266 417713.1563 368223.2704 439328.7809 414734.1045 377089.0396 425459.0357 1.045530982 1.001868019 0.989828111 1.000150639 0.981794065 0.865472912 1.032599484 0.974792094 0.886311038 1 18.69866071 -4.973124208 0.662454163 0.955331461 1.077539439 0.244675533 0.047854972 4.038824333 1.589762856 0.022796433 0.3592744 1.06E-05 4.973124208 0.122207977 TAPTSTIAPGVVMAS(ph)SPALPTQPAEEAAR ddPTM_A459_MK2206_30min_R2 1 TAPTSTIAPGVVMASSPALPTQPAEEAAR 29 0 C9JBT4;C9J896;P16220;P16220-1;H7C1R5 C9JBT4 CREB1 Cyclic AMP-responsive element-binding protein 1 1 TAPTSTIAPGVVMAS(0.644)S(0.356)PALPTQPAEEAAR 124.48 8.59E-14 3324000 17252 19347 17640 20272 16703 18555 18672 13764 15579 17899 TRUE FALSE 18572.82638 18386.25611 18228.1088 18615.71275 16047.15629 19261.12353 16220.34397 15563.00206 16934.03326 17314.9571 1.072646399 1.061871306 1.05273774 1.075123239 0.926780021 1.112397993 0.936782221 0.898818401 0.978000301 1 14.07973119 -6.768042957 0.839461636 0.949913197 1.066490521 0.350835273 0.056351666 0.655860937 1.006709508 0.036635326 0.034358374 1.71E-07 6.768042957 0.116577324 TAPTSTIAPGVVMASS(ph)PALPTQPAEEAAR ddPTM_A459_MK2206_30min_R1 1 TAPTSTIAPGVVMASSPALPTQPAEEAAR 29 0 C9JBT4;C9J896;P16220;P16220-1;H7C1R5 C9JBT4 CREB1 Cyclic AMP-responsive element-binding protein 1 1 TAPTSTIAPGVVMAS(0.232)S(0.767)PALPT(0.001)QPAEEAAR 107.01 9.53E-11 9012900 643.77 812.16 636.85 594.88 931.19 524.09 838.63 750.81 561.01 670.37 TRUE FALSE 589.0139809 759.2882364 593.6223964 640.6977607 894.0987305 553.7635229 782.6865229 744.2457473 619.3289971 753.4204966 0.78178651 1.007788134 0.787903168 0.850385361 1.186719414 0.73499928 1.038844213 0.987822538 0.822023027 1 9.557311472 TAPTSTIAPGVVMASS(ph)PALPTQPAEEAAR ddPTM_A459_MK2206_30min_R2 1 TAPTSTIAPGVVMASSPALPTQPAEEAAR 29 0 C9JBT4;C9J896;P16220;P16220-1;H7C1R5 C9JBT4 CREB1 Cyclic AMP-responsive element-binding protein 1 1 TAPTSTIAPGVVMAS(0.095)S(0.903)PALPT(0.002)QPAEEAAR 114.01 7.92E-12 3925000 14410 19628 16909 14782 17272 19817 15591 13703 15291 14251 TRUE FALSE 15513.24068 18653.30206 17472.73762 13574.26331 16593.8145 20571.14982 13543.88297 15494.02915 16620.98354 13785.99104 1.125290205 1.353062106 1.267427026 0.984641821 1.203672224 1.492177803 0.982438109 1.12389665 1.205642996 1 13.75091536 -9.511963293 0.306902907 0.945714082 1.233411123 0.145816721 0.14660531 11.1348494 1.564079365 0.915777441 0.18059735 3.08E-10 9.511963293 0.287697041 TAQALSSGS(ph)GSQETK ddPTM_A459_MK2206_30min_R2 1 TAQALSSGSGSQETK 15 0 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 TAQALS(0.002)S(0.054)GS(0.865)GS(0.079)QETK 171.87 6.69E-09 0 19541 16989 17556 13001 17934 10818 19634 15119 12321 20874 TRUE FALSE 21037.07398 16145.35096 18141.30828 11938.77671 17229.82105 11229.68657 17056.03222 17095.10521 13392.65831 20192.88309 1.041806358 0.799556502 0.898401095 0.591236856 0.853262061 0.556121012 0.844655621 0.84659061 0.66323656 1 14.30155929 -3.812399325 1.196699514 0.7635685 3.002939094 0.248782806 0.133154402 16.92539618 3.485564745 0.037135638 81.13147252 0.000154028 3.812399325 2.239370594 TAQALSSGSGS(ph)QETK ddPTM_A459_MK2206_30min_R1 2 TAQALSSGSGSQETK 15 0 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 TAQALSSGS(0.002)GS(0.987)QET(0.01)K;TAQALS(0.012)S(0.001)GS(0.043)GS(0.943)QET(0.001)K 245.04 8.77E-21 12710300 2643.2 3650.5 3380.7 2721.4 2654.1 2325.5 2916.5 2430.2 3050.6 3666.6 TRUE FALSE 2418.38196 3412.851786 3151.227503 2931.0027 2548.381577 2457.1678 2721.945606 2408.953018 3367.720787 4120.846089 0.586865393 0.828192005 0.764704004 0.711262356 0.61841222 0.596277499 0.660530762 0.584577285 0.817240128 1 12.00872487 -8.544508973 4.770193387 0.999824429 0.675077135 0.648961129 0.076511401 0.114938049 10.30284557 0.079309355 0.020655356 2.85E-09 8.544508973 -0.324747294 TAQALSSGSGS(ph)QETK ddPTM_A459_MK2206_30min_R2 3 TAQALSSGSGSQETK 15 0 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 TAQALSS(0.001)GS(0.263)GS(0.492)QET(0.244)K;TAQALSSGS(0.003)GS(0.996)QET(0.001)K;TAQALSS(0.001)GS(0.088)GS(0.911)QETK 195.45 8.36E-21 7371100 43536 38538 43598 40438 41351 31962.4 45722 34685 32440.7 47733 TRUE FALSE 46869.14963 36624.25896 45051.53556 37134.08605 39727.35197 33178.75153 39718.64648 39218.44859 35262.33345 46175.47612 1.015022553 0.7931539 0.975659362 0.804194979 0.860356087 0.718536208 0.860167557 0.849335013 0.763659336 1 15.49483922 -4.751357339 24.98861914 0.841982392 1.015022907 0.26738932 0.08291383 542.1304218 1343593.364 0.019504828 0.26126292 1.77E-05 4.751357339 0.173040515 TAQSPAMVGS(ph)PIR ddPTM_A459_MK2206_30min_R1 2 TAQSPAMVGSPIR 13 0 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 TAQSPAMVGS(1)PIR;TAQSPAMVGS(1)PIR 106.35 0.0069877 11595900 3079.6 2299.7 2499.8 2293.9 3991.5 3872.8 4365 2407.6 2374.13 2259.8 TRUE FALSE 2817.663848 2149.989112 2330.120541 2470.576575 3832.510103 4092.074589 4073.818814 2386.550607 2620.929309 2539.761085 1.109420829 0.846532032 0.917456589 0.972759442 1.509004184 1.61120454 1.604016551 0.93967524 1.031959 1 11.31047707 -6.177774961 7.859456826 1.31176415 0.948008959 0.299526461 0.237822663 0.390414556 33.0232745 0.077081937 0.099710629 6.64E-07 6.177774961 -0.363755191 TAQSPAMVGS(ph)PIR ddPTM_A459_MK2206_30min_R2 2 TAQSPAMVGSPIR 13 0 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 T(0.024)AQSPAMVGS(0.976)PIR;T(0.006)AQSPAMVGS(0.994)PIR 124.04 0.0023364 29906000 72683 82015 71977 90420 90649 98864 86167 70209 72928 87385 TRUE FALSE 78247.66636 77942.25436 74376.67726 83032.39676 87089.66479 102626.3388 74853.16939 79385.55736 79271.14562 84533.63461 0.925639442 0.922026537 0.879847147 0.982240941 1.030236842 1.21402965 0.885483864 0.93910025 0.937746803 1 16.36723786 -5.890076143 5.507699622 1.003150872 0.911064637 0.197434315 0.082951508 0.36981779 16.49911828 0.025444033 0.038326574 1.29E-06 5.890076143 -0.092086236 TAQVPS(ph)PPR ddPTM_A459_MK2206_30min_R1 3 TAQVPSPPR 9 0 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 TAQVPS(1)PPR;TAQVPS(1)PPR;TAQVPS(1)PPR 102.05 0.01648 858953000 14222.2 15151.8 14533.5 13129.2 13761.6 12868.6 14962.9 12539.5 13307.9 13049.2 TRUE FALSE 13012.52721 14165.41507 13547.00651 14140.41326 13213.44633 13597.20901 13964.75224 12429.86847 14691.30383 14665.83341 0.887268172 0.965878629 0.923712014 0.964173863 0.900967982 0.927135106 0.952196295 0.847539183 1.001736718 1 13.84017144 -8.376450943 24.99301397 1.000876507 0.924679722 0.457775916 0.034547554 20.53871894 4442.615963 0.031316465 0.008085879 4.20E-09 8.376450943 -0.076196784 TAQVPS(ph)PPR ddPTM_A459_MK2206_30min_R2 2 TAQVPSPPR 9 0 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 TAQVPS(1)PPR;TAQVPS(1)PPR 99.732 0.018545 634530000 2278300 2069000 2063550 2175530 1998710 1872630 2144600 1850020 1817010 1939100 TRUE FALSE 2452728.4 1966256.469 2132347.727 1997782.24 1920230.603 1943894.247 1863011.444 2091823.966 1975050.245 1875827.326 1.307544872 1.048207605 1.136750541 1.065013934 1.023671303 1.036286347 0.993167878 1.1151474 1.052895551 1 20.8390956 -2.339267961 1.325805375 1.049636435 200 0.736635448 0.045085131 568.4494455 1.703538201 0.012796033 343184.8436 0.004578593 2.339267961 198.9503636 TAQYSS(ph)PELK ddPTM_A459_MK2206_30min_R2 1 TAQYSSPELK 10 0 Q8TAT5 Q8TAT5 NEIL3 Endonuclease 8-like 3 1 TAQYS(0.078)S(0.922)PELK 153.49 0.00059339 10673000 79681 83282 75188 67216 69977 61790 86646 59531 60505 86166 TRUE FALSE 85781.43862 79146.33698 77694.73039 61724.23779 67229.35137 64141.46175 75269.27612 67311.9061 65767.61553 83354.41048 1.029116973 0.949515887 0.932101012 0.740503561 0.80654822 0.769502914 0.903002921 0.807538626 0.789011825 1 16.34697092 -5.579942533 5.731378771 0.822382117 0.978466232 0.444497689 0.072556956 0.157995554 10.67573848 0.018943701 0.033612629 2.63E-06 5.579942533 0.156084115 TARPFGIQAPGGTSQMERS(ph)PMLER ddPTM_A459_MK2206_30min_R1 1 TARPFGIQAPGGTSQMERSPMLER 24 2 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 TARPFGIQAPGGT(0.144)S(0.362)QMERS(0.494)PMLER 50.873 0.014164 21420000 1085.9 957.33 1188.6 1396.7 1345.5 1169 1097.3 1599.5 770.73 755.31 TRUE FALSE 993.5385027 895.007643 1107.921144 1504.274076 1291.905886 1235.18777 1024.101119 1585.51574 850.8501416 848.8835051 1.170406183 1.054335062 1.305150986 1.772061852 1.521888313 1.455073355 1.206409493 1.86776599 1.002316733 1 9.729422772 -5.519049502 24.95066972 1.446342195 1.129213659 0.137491221 0.273993806 230.4280009 1501425.533 0.069721947 0.124320663 3.03E-06 5.519049502 -0.317128537 TAS(ph)APNLDR ddPTM_A459_MK2206_30min_R2 1 TASAPNLDR 9 0 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 T(0.055)AS(0.945)APNLDR 93.839 0.024036 19024000 67590 86013 68885 88116 72796 81390 71283 61254 70736 65462 TRUE FALSE 72764.74237 81741.71949 71181.59152 80916.64093 69937.66327 84487.35348 61923.45647 69260.10812 76888.48942 63325.9803 1.14905039 1.290808592 1.124050369 1.277779523 1.104407116 1.334165742 0.977852316 1.093707634 1.214169746 1 15.95050988 -7.267294781 24.99998247 1.0792414 1.210810491 0.364707683 0.091508615 568.8614022 2428772.963 0.035562192 0.024687639 5.40E-08 7.267294781 0.13156909 TAS(ph)EGDGGAAAGAAAAGAR ddPTM_A459_MK2206_30min_R1 1 TASEGDGGAAAGAAAAGAR 19 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.005)AS(0.995)EGDGGAAAGAAAAGAR 95.9 0.0016842 7776800 2528.8 2538.1 2396.6 2478.1 1844.9 1913.9 2667 2823 2043.8 2694.8 TRUE FALSE 2313.712281 2372.869229 2233.925469 2668.963691 1771.413726 2022.263364 2489.089296 2798.318809 2256.260324 3028.652169 0.763941236 0.78347367 0.737597236 0.881238103 0.584885166 0.667710668 0.821847197 0.92394856 0.744971756 1 11.56446018 -8.806592056 0.643765272 0.998049408 0.745963238 0.380319198 0.09108859 1.312138647 1.099898755 0.103574106 0.038807546 1.56E-09 8.806592056 -0.25208617 TAS(ph)EGDGGAAAGAAAAGAR ddPTM_A459_MK2206_30min_R2 2 TASEGDGGAAAGAAAAGAR 19 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.009)AS(0.991)EGDGGAAAGAAAAGAR;T(0.003)AS(0.997)EGDGGAAAGAAAAGAR 116.04 0.00047 150585000 40201 40665 50330 38328 40444 44774 64386 42769 42456 52528 TRUE FALSE 43278.81947 38645.63523 52007.97708 35196.47979 38855.96535 46477.90594 55932.04086 48359.05515 46148.74614 50814.01566 0.851710279 0.760531021 1.023496695 0.692652988 0.764670236 0.914667053 1.100720739 0.951687335 0.908189316 1 15.63293886 -6.981969672 6.880661131 0.989304569 0.821136065 0.433584028 0.09262992 0.156130628 31.96191266 0.033659886 0.029009033 1.04E-07 6.981969672 -0.168168504 TAS(ph)EINFDK ddPTM_A459_MK2206_30min_R1 1 TASEINFDK 9 0 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 T(0.217)AS(0.783)EINFDK 91.093 0.027675 19524000 2257.9 3092.5 2850.6 2705.4 2746.1 2469.8 3115.2 2521.8 3141.9 3159.5 TRUE FALSE 2065.853748 2891.177688 2657.109214 2913.770377 2636.717022 2609.637942 2907.390692 2499.752168 3468.511748 3550.922713 0.581779418 0.814204623 0.748286975 0.820567107 0.742544188 0.73491826 0.818770479 0.703972564 0.976791676 1 11.79397824 -14.52287875 0.099248113 1.802271924 0.600603605 0.53310609 0.080543983 153.955084 1.037441602 25.06521059 1.342592731 3.00E-15 14.52287875 -1.201668319 TAS(ph)EINFDK ddPTM_A459_MK2206_30min_R2 2 TASEINFDK 9 0 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 T(0.003)AS(0.997)EINFDK;T(0.019)AS(0.981)EINFDK 112.5 0.0096587 12141200 43652 48344 53393 54396 57499 39519 55361 35419 35518 53531 TRUE FALSE 46994.03068 45943.30726 55173.09597 49951.6728 55241.30035 41022.92324 48092.0342 40048.38491 38607.29144 51784.28785 0.907495934 0.887205544 1.065440856 0.964610596 1.066757942 0.792188614 0.928699345 0.773369425 0.745540646 1 15.66022681 -6.772536645 24.99810198 0.83884142 0.977321652 0.34988554 0.088394929 239.4022337 539282.9645 0.030883792 0.027489455 1.69E-07 6.772536645 0.138480232 TAS(ph)ELLLDR ddPTM_A459_MK2206_30min_R1 1 TASELLLDR 9 0 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 T(0.169)AS(0.831)ELLLDR 92.866 0.025325 2051200 822.59 816.54 622.15 594.58 919.57 869.28 1186.2 881.99 983.89 783.23 TRUE FALSE 752.6244009 763.3830976 579.9201914 640.3746546 882.9415797 918.4978824 1107.070762 874.2788544 1086.168886 880.2624455 0.855000011 0.867222158 0.65880374 0.727481512 1.003043563 1.043436406 1.257659881 0.993202492 1.233914831 1 9.781789909 -6.475269651 2.705341044 1.114610306 0.775669759 0.705393521 0.099995627 0.151530502 2.203904027 0.034196253 0.037647192 3.35E-07 6.475269651 -0.338940547 TAS(ph)ELLLDR ddPTM_A459_MK2206_30min_R2 1 TASELLLDR 9 0 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 T(0.005)AS(0.995)ELLLDR 125.72 0.0049764 3070600 10934 6732.2 8289.7 6792.3 5617.2 7720.5 11020 6018.9 11035 8975.2 TRUE FALSE 11771.11545 6397.888738 8566.074461 6237.347363 5396.640504 8014.309038 9573.060763 6805.590896 11994.80435 8682.339959 1.355753806 0.736885306 0.986608967 0.718394741 0.621565215 0.923058654 1.102589948 0.783842942 1.381517472 1 13.0838682 -8.251541202 24.79338405 1.190758752 0.892506717 0.213990609 0.219328396 792.5722959 1985282.994 0.148731187 0.054688006 5.60E-09 8.251541202 -0.298252035 TAS(ph)EPNLK ddPTM_A459_MK2206_30min_R1 1 TASEPNLK 8 0 P56524-2;P56524;Q9UKV0-10;Q9UKV0-3;Q9UKV0-4;Q9UKV0-2;Q9UKV0;Q9UQL6-2;Q9UKV0-5;Q9UKV0-7;Q9UQL6;Q9UQL6-3 P56524-2 HDAC4;HDAC9;HDAC5 Histone deacetylase 4;Histone deacetylase 9;Histone deacetylase 5 1 TAS(1)EPNLK 127.76 0.0044995 23293000 4417.2 4271.2 3910.8 3774 4090.5 3262.2 4099 3984.1 4395.6 3757.1 TRUE FALSE 4041.493944 3993.144104 3645.345792 4064.674134 3927.566723 3446.902945 3825.563189 3949.267434 4852.53835 4222.557913 0.957119838 0.94566947 0.863302734 0.962609446 0.93013922 0.816306849 0.905982409 0.935278453 1.149194031 1 12.04390149 -8.135798597 5.927318517 1.072596149 0.910855208 0.588520075 0.053756077 0.150643501 6.480688156 0.037021017 0.013611853 7.31E-09 8.135798597 -0.161740942 TAS(ph)ESISNLSEAGSIK ddPTM_A459_MK2206_30min_R1 1 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 T(0.011)AS(0.708)ES(0.245)IS(0.035)NLSEAGSIK 129.05 0.00090241 2703200 1932.9 1662.5 2109.7 1639.5 2017.2 1489.7 1713.8 1762.3 1815.7 1648.4 TRUE FALSE 1768.496705 1554.270948 1966.499442 1765.774574 1936.850653 1574.045527 1599.475529 1746.892397 2004.448513 1852.616237 0.954594195 0.838960016 1.061471557 0.953124851 1.045467817 0.849633883 0.863360418 0.942932682 1.0819556 1 10.85534835 -8.241350207 20.71511286 1.040977603 0.938021749 0.237032765 0.07339598 115.5017714 119103.5175 0.051080979 0.019189071 5.74E-09 8.241350207 -0.102955855 TAS(ph)ESISNLSEAGSIK ddPTM_A459_MK2206_30min_R2 1 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 T(0.045)AS(0.942)ES(0.003)ISNLS(0.002)EAGS(0.007)IK 268.42 2.29E-50 33066000 77191 95430 78816 82187 88216 71750 86363 68382 61693 74565 TRUE FALSE 83100.80231 90691.08497 81443.6861 75472.0592 84752.19659 74480.49653 75023.43436 77319.76219 67058.94562 72131.95016 1.152066486 1.257294233 1.129093085 1.046305542 1.174960561 1.032559031 1.040086039 1.071921139 0.929670492 1 16.13835081 -6.149570135 0.396894077 0.978507236 1.249715821 0.613719542 0.05627453 1.388470614 0.364479262 0.05454845 0.161957423 7.09E-07 6.149570135 0.271208585 TAS(ph)ESNVYLNSFHYPDHSYK ddPTM_A459_MK2206_30min_R2 1 TASESNVYLNSFHYPDHSYK 20 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;E9PGF6;A0A1W2PRT1;A0A1W2PRJ2 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 T(0.194)AS(0.796)ES(0.01)NVYLNSFHYPDHSYK 126.93 0.0001374 8353300 39178 51306 33377 51855 38324 32321 40198 22555 29386 28054 TRUE FALSE 42177.4978 48758.21865 34489.77252 47618.28062 36819.2072 33550.9983 34919.95431 25503.01594 31941.94116 27138.60028 1.554151554 1.796637194 1.270875143 1.75463289 1.356709883 1.2362833 1.286726432 0.939732178 1.176992949 1 14.72805869 -6.872928419 0.79770202 1.028509062 1.622004568 0.667292529 0.157676865 0.367493012 0.501948872 0.106331434 0.091111244 1.34E-07 6.872928419 0.593495506 TAS(ph)FSESR ddPTM_A459_MK2206_30min_R1 5 TASFSESR 8 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.007)AS(0.992)FSESR;T(0.475)AS(0.523)FS(0.002)ESR;T(0.078)AS(0.908)FS(0.013)ES(0.001)R;T(0.002)AS(0.997)FS(0.001)ESR;T(0.001)AS(0.996)FS(0.003)ESR 133.99 0.0029199 4304910000 26140.7 28482.8 27344 21870.8 28180.1 27207 39618.1 38688.3 44243.4 46137.1 TRUE FALSE 23917.29619 26628.56454 25487.96546 23555.29281 27057.62694 28747.43683 36975.24884 38350.05227 48842.65976 51852.91227 0.461252708 0.513540385 0.491543567 0.454271357 0.521814991 0.554403515 0.713079502 0.739593026 0.941946317 1 15.6621374 -7.804616117 0.848757969 1.00659043 0.477857518 0.974237701 0.030529781 0.082165874 0.110137455 0.027070751 0.011616114 1.57E-08 7.804616117 -0.528732913 down TAS(ph)FSESR ddPTM_A459_MK2206_30min_R2 8 TASFSESR 8 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.001)AS(0.999)FSESR;T(0.001)AS(0.999)FSESR;T(0.015)AS(0.984)FS(0.001)ES(0.001)R;T(0.008)AS(0.991)FS(0.001)ESR;T(0.005)AS(0.928)FS(0.056)ES(0.011)R;T(0.002)AS(0.968)FS(0.028)ES(0.002)R;TAS(0.783)FS(0.135)ES(0.082)R;T(0.076)AS(0.921)FS(0.003)ESR 133.99 0.0029199 6412572700 516117 751689 618643 744691 673392 756218 941740 769181 898069 1004575 TRUE FALSE 555631.3143 714361.2173 639268.2489 683847.3632 646951.2466 784996.4059 818088.4068 869715.5977 976181.4183 971795.8 0.571757271 0.735093954 0.65782158 0.703694504 0.66572756 0.807779171 0.841831593 0.894957148 1.004512901 1 19.89029367 -7.427508749 0.773791239 1.012767139 0.656367524 0.899816896 0.04421214 0.18537901 0.211329075 0.036279826 0.019963116 3.74E-08 7.427508749 -0.356399615 TAS(ph)FSESRADEVAPAK ddPTM_A459_MK2206_30min_R1 2 TASFSESRADEVAPAK 16 1 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.001)AS(0.947)FS(0.052)ESRADEVAPAK;T(0.034)AS(0.616)FS(0.326)ES(0.024)RADEVAPAK 197.51 5.00E-06 146559000 6283.2 5949.8 6338.1 6146.1 7552.2 6405.3 6999.1 10972.3 6207.3 3256.2 TRUE FALSE 5748.780846 5562.466939 5907.887431 6619.473687 7251.379882 6767.962551 6532.20281 10876.37034 6852.571048 3659.602639 1.570875697 1.51996473 1.614352162 1.808795746 1.981466459 1.849370879 1.784948655 2.972008551 1.872490465 1 11.83747129 -5.966211037 1.160824926 2.023483822 1.519373776 0.074368789 0.453294571 0.974486806 2.662503262 0.171189364 0.352104214 1.08E-06 5.966211037 -0.504110047 TAS(ph)FSESRADEVAPAKK ddPTM_A459_MK2206_30min_R1 3 TASFSESRADEVAPAKK 17 2 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.319)AS(0.375)FS(0.305)ES(0.001)RADEVAPAKK;T(0.122)AS(0.804)FS(0.043)ES(0.032)RADEVAPAKK;T(0.128)AS(0.843)FS(0.029)ESRADEVAPAKK 151.03 0.00026167 275617000 9139.9 9302.6 9094.4 11447.8 13552.8 10427.7 10012.8 21445.7 8040.5 4024.2 TRUE FALSE 8362.503509 8696.999049 8477.097466 12329.51154 13012.96328 11018.10736 9344.864381 21258.20251 8876.338748 4522.748277 1.848987164 1.922945633 1.874324403 2.726110494 2.877224749 2.436153128 2.066191574 4.700284253 1.962598448 1 12.14298399 -5.760022788 24.26176662 2.682730968 1.886171475 0.087563441 0.889055802 50.09733301 857952.5641 0.236421338 0.382554408 1.74E-06 5.760022788 -0.796559493 TAS(ph)GSSVTSLDGTR ddPTM_A459_MK2206_30min_R1 1 TASGSSVTSLDGTR 14 0 E5RJY1;E7ESM1;Q92597-3;Q92597-2;Q92597 E5RJY1 NDRG1 Protein NDRG1 1 T(0.275)AS(0.543)GS(0.141)S(0.041)VTSLDGTR 239.38 1.78E-19 224110000 2342.6 2311.1 2336.4 1775.2 2203.2 2503.7 2741.3 2254.7 2167.6 1952.8 TRUE FALSE 2143.349569 2160.64697 2177.811678 1911.926212 2115.441879 2645.45733 2558.432879 2234.987396 2392.929777 2194.727607 0.976590244 0.984471587 0.99229247 0.871145105 0.963874456 1.205369323 1.165717728 1.018343866 1.090308323 1 11.09982618 -6.663064316 9.494659814 1.101301874 0.955536613 0.531544076 0.064823126 0.241364726 21.22902616 0.022220551 0.022206273 2.17E-07 6.663064316 -0.145765261 TAS(ph)GSSVTSLDGTR ddPTM_A459_MK2206_30min_R2 3 TASGSSVTSLDGTR 14 0 E5RJY1;E7ESM1;Q92597-3;Q92597-2;Q92597 E5RJY1 NDRG1 Protein NDRG1 1 T(0.007)AS(0.966)GS(0.025)S(0.001)VT(0.001)SLDGTR;T(0.361)AS(0.63)GS(0.008)SVTSLDGTR;T(0.002)AS(0.998)GSSVTSLDGTR 222.81 4.45E-09 287188000 267185 251415 228116 250007 226025 234912 211693 196891 221508 203817 TRUE FALSE 287640.889 238930.0967 235721.2736 229580.6284 217150.1228 243851.7408 183897.4548 222625.3297 240774.3654 197166.468 1.458873266 1.211819125 1.195544435 1.164399965 1.101354226 1.236780997 0.932701471 1.129123689 1.221172991 1 17.58905469 -1.522878746 0.668521586 1.105622548 35.25401974 0.588429939 0.087097976 172.6749555 1.037988923 0.034980604 8761.721109 0.03 1.522878746 34.14839719 TAS(ph)LNQRPR ddPTM_A459_MK2206_30min_R1 2 TASLNQRPR 9 1 A0A0A0MRT6;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0;B6VEX4;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7 A0A0A0MRT6 ABI1 Abl interactor 1 1 T(0.072)AS(0.928)LNQRPR;T(0.136)AS(0.864)LNQRPR 94.363 0.012837 41266000 5653.3 4321.2 4856.1 4401.5 4144.1 3728.7 4041.7 5078.6 3274.2 3948.6 TRUE FALSE 5172.457148 4039.889095 4526.481462 4740.504293 3979.031722 3939.815772 3772.085567 5034.198336 3614.564807 4437.782378 1.165549977 0.910339613 1.019987254 1.068214682 0.896626148 0.887789314 0.849993363 1.134395044 0.814497985 1 12.11562321 -4.753664247 24.96375641 0.956329249 1.165550361 0.305084331 0.095909293 355.8651797 1142489.05 0.023280902 0.244259612 1.76E-05 4.753664247 0.209221112 TAS(ph)LPGYGR ddPTM_A459_MK2206_30min_R1 2 TASLPGYGR 9 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(0.011)AS(0.989)LPGYGR;T(0.015)AS(0.985)LPGYGR 110.53 0.010796 130317000 7771.4 6442 6050 4980.8 5813.6 5072 5930.6 5379.9 5367.6 5327.2 TRUE FALSE 7110.401621 6022.624629 5639.342856 5364.422079 5582.032001 5359.172257 5534.980495 5332.864101 5925.581228 5987.173754 1.187605691 1.005921137 0.941903991 0.895985702 0.93233172 0.895108857 0.924473002 0.890714771 0.989712587 1 12.54765942 -4.705558625 1.8107881 0.925922346 1.30973445 0.820120685 0.03585115 0.38941178 1.129368639 0.00918231 0.274048789 1.97E-05 4.705558625 0.383812104 TAS(ph)LPGYGR ddPTM_A459_MK2206_30min_R2 1 TASLPGYGR 9 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(0.083)AS(0.917)LPGYGR 120.27 0.0066319 54729000 42165 37270 29191 45533 40993 33022 48805 30184 32911 37960 TRUE FALSE 45393.18482 35419.226 30164.21337 41812.80825 39383.40885 34278.67535 42396.84487 34129.15244 35773.53929 36721.36831 1.236151781 0.964539929 0.821434896 1.138650605 1.072492956 0.933480339 1.154555149 0.929408516 0.974188625 1 15.1643322 -4.756093542 24.99670245 1.000508604 1.236152151 0.356276673 0.095706562 198.6855654 928938.0758 0.023964981 0.200631925 1.75E-05 4.756093542 0.235643547 TAS(ph)LTSAASVDGNR ddPTM_A459_MK2206_30min_R1 1 TASLTSAASVDGNR 14 0 G3V578;H0YJT9;A0A0A0MS87;Q9UN36-4;Q9UN36-5;Q9UN36-2;Q9UN36-3;Q9UN36-6;Q9UN36 G3V578 NDRG2 Protein NDRG2 1 T(0.114)AS(0.771)LT(0.114)SAASVDGNR 244.71 4.06E-20 16356000 2078.8 1890.9 1822.3 1573.1 1785.9 1685.4 1724.9 1460.8 1787.7 1530.6 TRUE FALSE 1901.987144 1767.802066 1698.607353 1694.260435 1714.763821 1780.825892 1609.835068 1448.02838 1973.537812 1720.222283 1.105663589 1.02765909 0.987434804 0.984907852 0.996826886 1.035230103 0.93582968 0.841768179 1.14725744 1 10.74837928 -4.695769558 1.621905108 0.984264088 1.169731286 0.183932752 0.072277622 2.050285226 4.463049515 0.01968557 0.643102951 2.01E-05 4.695769558 0.185467198 TAS(ph)LTSAASVDGNR ddPTM_A459_MK2206_30min_R2 1 TASLTSAASVDGNR 14 0 G3V578;H0YJT9;A0A0A0MS87;Q9UN36-4;Q9UN36-5;Q9UN36-2;Q9UN36-3;Q9UN36-6;Q9UN36 G3V578 NDRG2 Protein NDRG2 1 T(0.004)AS(0.957)LT(0.038)S(0.001)AASVDGNR 99.927 0.0093496 26076000 24783 30143 24507 38623 21917 22955 25642 26486 23436 24753 TRUE FALSE 26680.40553 28646.14245 25324.05115 35467.37735 21056.42846 23828.56861 22275.1746 29947.81114 25474.42092 23945.31164 1.114222523 1.196315291 1.057578683 1.481182533 0.879354956 0.995124598 0.930252023 1.250675355 1.0638584 1 14.54745559 -6.296970803 24.99969505 1.026692431 1.20012829 0.315471981 0.138193377 827.5640889 582266.7559 0.043310178 0.049110625 5.05E-07 6.296970803 0.173435859 TAS(ph)LVTR ddPTM_A459_MK2206_30min_R1 1 TASLVTR 7 0 Q7L7X3;Q7L7X3-3;Q7L7X3-2 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 TAS(0.998)LVT(0.001)R 98.582 0.021764 37654000 5029.2 4671.7 4293 4130.8 4624.9 4009.2 4350.8 4007.8 3183.3 3331.4 TRUE FALSE 4601.440131 4367.571481 4001.603121 4448.954932 4440.68044 4236.197439 4060.56607 3972.760227 3514.215427 3744.118983 1.228978072 1.16651514 1.068770287 1.188251482 1.186041485 1.131427035 1.084518438 1.061066768 0.938596087 1 11.87041057 -7.725878834 1.326642313 0.972288644 1.162298557 0.747309049 0.043744272 0.235320765 0.763986147 0.036609732 0.014556509 1.88E-08 7.725878834 0.190009914 TAS(ph)LVTR ddPTM_A459_MK2206_30min_R2 2 TASLVTR 7 0 Q7L7X3;Q7L7X3-3;Q7L7X3-2 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 T(0.008)AS(0.805)LVT(0.187)R;T(0.005)AS(0.995)LVT(0.001)R 92.838 0.026497 54233000 257440 339290 292730 332580 273240 290440 286510 190303 242540 246114 TRUE FALSE 277149.8043 322441.352 302489.4721 305407.1501 262511.2247 301492.8977 248890.8928 215176.2555 263635.6908 238083.3203 1.164087446 1.354321468 1.270519378 1.282774239 1.102602334 1.266333556 1.045394077 0.903785512 1.107325328 1 17.86110703 -7.335261561 4.390548613 0.999683404 1.242676556 0.662694188 0.079157604 0.134730763 4.951398311 0.034227091 0.022730858 4.62E-08 7.335261561 0.242993151 TAS(ph)NPKVENEDEPVR ddPTM_A459_MK2206_30min_R1 1 TASNPKVENEDEPVR 15 1 Q9UBF8-2 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 T(0.103)AS(0.897)NPKVENEDEPVR 64.346 0.038033 29417000 4351.9 5586.7 5762.1 5393.5 3890 3446.5 3669 4320.5 4671.7 4034.4 TRUE FALSE 3981.748052 5223.004815 5370.984706 5808.908305 3735.053063 3641.637852 3424.247704 4282.726324 5157.339933 4534.21193 0.878156582 1.151910165 1.184546463 1.281128539 0.823749115 0.803146811 0.755202394 0.944535983 1.137428072 1 12.14663611 -6.273711293 24.98994226 0.894753611 1.130262996 0.355201984 0.139673673 824.0872528 1678128.915 0.045623868 0.052104956 5.32E-07 6.273711293 0.235509385 TAS(ph)NPKVENEDEPVR ddPTM_A459_MK2206_30min_R2 2 TASNPKVENEDEPVR 15 1 Q9UBF8-2 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 T(0.089)AS(0.911)NPKVENEDEPVR;T(0.003)AS(0.997)NPKVENEDEPVR 135.69 0.0019402 21349100 61196 71326 62227 52637 78047 60562 76453 54141 50018 65348 TRUE FALSE 65881.21281 67784.05456 64301.61712 48336.38872 74982.48263 62866.72935 66414.62926 61217.41459 54368.47523 63215.70011 1.042165359 1.072266137 1.017177964 0.764626329 1.186137028 0.994479682 1.050603397 0.968389411 0.860047032 1 15.94799529 -7.996673991 10.90409909 0.924735986 1.015595014 0.106502673 0.103687425 0.267912895 684.4528346 0.058652195 0.026888818 1.01E-08 7.996673991 0.090859028 TAS(ph)PLPLRPDAPVEK ddPTM_A459_MK2206_30min_R1 1 TASPLPLRPDAPVEK 15 1 Q9HCK8-2;Q9HCK8;H0YJG4 Q9HCK8-2 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 T(0.054)AS(0.946)PLPLRPDAPVEK 136.63 0.0019221 14499000 1541.5 1561.1 1939.8 1631.7 1891.7 1886.4 1821.5 1805.1 1721.3 1367.2 TRUE FALSE 1410.38733 1459.472106 1808.131781 1757.373817 1816.349583 1993.206338 1699.991059 1789.318201 1900.235295 1536.579058 0.917874888 0.949819079 1.176725513 1.143692417 1.182073629 1.297171355 1.106347929 1.164481705 1.236666142 1 10.58550628 -5.237245325 4.9123526 1.172541711 0.927739046 0.603424925 0.074232353 0.112820204 7.658021812 0.018388198 0.048359476 5.79E-06 5.237245325 -0.244802665 TAS(ph)PPALPK ddPTM_A459_MK2206_30min_R1 1 TASPPALPK 9 0 Q13029-5;Q13029-3;Q13029-2;Q13029 Q13029-5 PRDM2 PR domain zinc finger protein 2 1 T(0.269)AS(0.731)PPALPK 82.261 0.041788 2680500 3861 3809 4148.8 3302.6 4130.1 3713.5 3741.5 3681.4 3437.9 2691.7 TRUE FALSE 3532.601675 3561.033408 3867.191015 3556.966824 3965.589371 3923.755161 3491.911362 3649.213908 3795.282008 3025.168117 1.167737309 1.177135706 1.278339208 1.175791456 1.310865783 1.29703706 1.154286713 1.206284665 1.254568956 1 11.5627996 -10.62722114 4.790417393 0.999997294 1.225467093 0.605229685 0.054432075 39779231.27 0.715197059 5066.838187 0.01352796 2.36E-11 10.62722114 0.225469799 TAS(ph)PPALPK ddPTM_A459_MK2206_30min_R2 2 TASPPALPK 9 0 Q13029-5;Q13029-3;Q13029-2;Q13029 Q13029-5 PRDM2 PR domain zinc finger protein 2 1 T(0.08)AS(0.92)PPALPK;T(0.052)AS(0.948)PPALPK 117.02 0.0076638 12246700 102606 106799 92281 114763 92247 88267 121574 92241 77561 102799 TRUE FALSE 110461.5943 101495.517 95357.60248 105386.4958 88624.91928 91626.06254 105611.1878 104297.2154 84307.11558 99444.67705 1.110784383 1.020622923 0.958901022 1.059749993 0.891198221 0.921377245 1.06200946 1.048796361 0.847779068 1 16.60160653 -4.299320498 1.234349945 0.97469622 1.373013911 0.269634172 0.068770637 5.968147507 3.474225246 0.020575495 4.052447035 5.02E-05 4.299320498 0.398317691 TAS(ph)PPGPPPYGK ddPTM_A459_MK2206_30min_R2 1 TASPPGPPPYGK 12 0 P54259 P54259 ATN1 Atrophin-1 1 T(0.199)AS(0.801)PPGPPPYGK 84.605 0.0324 24896000 140580 165010 195250 217000 177610 131490 198690 168110 124150 212850 TRUE FALSE 151342.9129 156815.8433 201759.5375 199270.4059 170636.139 136493.9441 172601.7643 190082.5542 134948.3426 205904.7219 0.735014289 0.761594207 0.979868435 0.96777968 0.828714064 0.662898562 0.83826035 0.92315782 0.65539217 1 17.65161739 -10.70789519 5.579013515 1.000003494 0.824126819 0.196718502 0.110107601 7.13E-06 1.04E-06 0.11117241 0.026962505 1.96E-11 10.70789519 -0.175876675 TAS(ph)PPPPPK ddPTM_A459_MK2206_30min_R1 5 TASPPPPPK 9 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.119)AS(0.881)PPPPPK;T(0.053)AS(0.947)PPPPPK;T(0.356)AS(0.644)PPPPPK;T(0.022)AS(0.978)PPPPPK;T(0.157)AS(0.843)PPPPPK 120.27 0.0066319 759077400 51134.1 51681.2 50792.8 43602.8 45742.8 39002.9 46077 45189.4 41607.7 40304.6 TRUE FALSE 46784.87628 48316.74449 47345.12625 46961.09521 43920.76741 41211.21049 43003.2874 44794.31384 45932.96931 45297.83813 1.032828016 1.066645705 1.045196155 1.036718244 0.969599637 0.909783164 0.949345249 0.988884143 1.014021225 1 15.46715458 -6.225555778 4.22408296 0.966806335 1.048343674 0.617168834 0.028247482 0.14906765 6.107861869 0.009426875 0.01196873 5.95E-07 6.225555778 0.081537339 TAS(ph)PPPPPK ddPTM_A459_MK2206_30min_R2 3 TASPPPPPK 9 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.001)AS(0.999)PPPPPK;TAS(1)PPPPPK;T(0.007)AS(0.993)PPPPPK 150.81 0.0012801 680700000 536255 596839 560611 580475 564394 426551 611351 497585 498588 537118 TRUE FALSE 577311.0951 567200.8431 579301.4909 533048.3357 542233.0557 442783.6972 531079.8793 562621.068 541954.283 519591.8836 1.111085668 1.091627604 1.114916359 1.025898118 1.043574915 0.852175931 1.022109652 1.082813427 1.043038392 1 18.98701937 -5.879156965 2.90046303 1.005561962 1.105438269 0.368167253 0.057630965 0.311346084 5.267270725 0.018532273 0.029983896 1.32E-06 5.879156965 0.099876307 TAS(ph)PPPPPKR ddPTM_A459_MK2206_30min_R1 2 TASPPPPPKR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.109)AS(0.891)PPPPPKR;T(0.001)AS(0.999)PPPPPKR 144.17 0.0018132 172171000 9181.3 8720.4 9240.7 8015.8 8531.1 7871.1 8785.1 8705.7 8022.2 6686.8 TRUE FALSE 8400.382222 8152.700375 8613.46703 8633.178305 8191.288222 8316.75488 8199.062008 8629.586983 8856.136398 7515.211267 1.117783908 1.084826505 1.14613771 1.14876056 1.089961138 1.106656165 1.090995545 1.148282686 1.178428135 1 12.87559795 -4.307638111 19.93281222 1.115163234 52.25363655 0 0.047604648 9918.219387 919169.6928 0.010939704 16799.43898 4.92E-05 4.307638111 51.13847332 TAS(ph)PPPPPKR ddPTM_A459_MK2206_30min_R2 5 TASPPPPPKR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.258)AS(0.742)PPPPPKR;T(0.006)AS(0.994)PPPPPKR;T(0.142)AS(0.858)PPPPPKR;T(0.105)AS(0.895)PPPPPKR;T(0.137)AS(0.863)PPPPPKR 101.35 0.0084461 672175000 212447 267997 222293 253583 237377 211220 259792 202389 201170 244780 TRUE FALSE 228712.1057 254688.6587 229704.1377 232864.4577 228056.3863 219258.1251 225680.9983 228841.9372 218667.403 236792.8486 0.96587421 1.075575805 0.970063661 0.98341001 0.963105041 0.9259491 0.953073539 0.966422502 0.923454421 1 17.85326599 -5.725097112 1.73789922 0.953067873 1.019127394 0.311107804 0.033841432 0.370985373 2.271244664 0.009970011 0.021903123 1.88E-06 5.725097112 0.066059522 TAS(ph)QEGCQELTQEQR ddPTM_A459_MK2206_30min_R2 1 TASQEGCQELTQEQR 15 0 A0A0C4DG33;O43933-2;O43933 A0A0C4DG33 PEX1 Peroxisome biogenesis factor 1 1 T(0.004)AS(0.996)QEGCQELTQEQR 97.352 0.0095825 11052000 11113 13736 12473 13544 13628 13606 13760 11092 10249 13024 TRUE FALSE 11963.81982 13053.89021 12888.84359 12437.41187 13092.89624 14123.78586 11953.29547 12541.76248 11140.43949 12599.02795 0.949582767 1.036102965 1.023003017 0.987172338 1.039198921 1.12102187 0.948747437 0.995454771 0.88423008 1 13.62102481 TAS(ph)QGPQTDSVIQNSENIK ddPTM_A459_MK2206_30min_R2 1 TASQGPQTDSVIQNSENIK 19 0 Q9NZN5-2;E9PMR6;Q9NZN5 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 T(0.437)AS(0.563)QGPQTDSVIQNSENIK 149.34 3.20E-05 9003800 43449 50634 47547 55116 47592 51863 82182 67016 75996 90085 TRUE FALSE 46775.48885 48119.58919 49132.19325 50612.84649 45723.29895 53836.68281 71391.40468 75775.2213 82605.99471 87145.53383 0.536751418 0.552175046 0.563794736 0.580785317 0.524677478 0.617779024 0.819220464 0.869525011 0.947908528 1 16.41113911 -7.444043535 1.338334373 0.964443133 0.548209817 0.977042885 0.026812759 0.062658133 0.214403632 0.019276844 0.009584838 3.60E-08 7.444043535 -0.416233316 TASAETPRPSQLAQPSPFQLS(ph)ASVPK ddPTM_A459_MK2206_30min_R1 1 TASAETPRPSQLAQPSPFQLSASVPK 26 1 O60292;M0R2Q7 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 TASAETPRPSQLAQPS(0.001)PFQLS(0.747)AS(0.252)VPK 87.793 3.69E-05 11495000 629.99 693.51 786.35 759.44 667.54 976.84 1559.3 1795.3 1847 1832.3 TRUE FALSE 576.4060423 648.3623729 732.9747529 817.9322004 640.9504683 1032.147837 1455.281942 1779.603881 2039.00226 2059.299157 0.279903986 0.314846131 0.355934081 0.397189596 0.311246895 0.501213159 0.706687971 0.864179386 0.990143784 1 11.00793771 -7.445273593 1.137856802 1.005660441 0.324147782 0.984397559 0.034508379 0.057440369 0.140128315 0.026948484 0.013191642 3.59E-08 7.445273593 -0.681512659 down TASAETPRPSQLAQPSPFQLS(ph)ASVPK ddPTM_A459_MK2206_30min_R2 1 TASAETPRPSQLAQPSPFQLSASVPK 26 1 O60292;M0R2Q7 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 TASAETPRPSQLAQPSPFQLS(0.761)AS(0.239)VPK 121.48 4.24E-09 7876200 6430.4 11191 8552.3 13163 11311 12061 20921 21044 21547 30245 TRUE FALSE 6922.716368 10635.27121 8837.429414 12087.54079 10866.87331 12519.98981 18174.04757 23794.52305 23421.11911 29258.10813 0.236608476 0.363498254 0.30205061 0.413134737 0.37141408 0.427915221 0.621162773 0.813262531 0.800500122 1 14.83654887 -7.630950392 0.7723901 0.981669962 0.309996085 0.959003379 0.049487267 0.113998714 0.127776019 0.043439629 0.021318483 2.34E-08 7.630950392 -0.671673877 down TASAETPRPSQLAQPSPFQLSAS(ph)VPK ddPTM_A459_MK2206_30min_R1 1 TASAETPRPSQLAQPSPFQLSASVPK 26 1 O60292;M0R2Q7 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 TASAETPRPSQLAQPS(0.005)PFQLS(0.184)AS(0.811)VPK 47.162 0.027825 10218000 709.1 900.58 897.01 834.71 626.82 1184 1627.8 1962.5 1585.8 2063.9 TRUE FALSE 648.7873214 841.9520783 836.1234604 898.9995088 601.8524321 1251.037057 1519.212432 1945.342069 1750.649585 2319.591514 0.279698955 0.362974288 0.36046151 0.387568028 0.259464836 0.539335072 0.654948263 0.838657176 0.754723224 1 11.17965505 -7.402651447 1.053077409 0.905092608 0.326636167 0.916555201 0.070358036 0.138743324 0.290763951 0.052491784 0.026630191 3.96E-08 7.402651447 -0.578456441 down TASAETPRPSQLAQPSPFQLSAS(ph)VPK ddPTM_A459_MK2206_30min_R2 1 TASAETPRPSQLAQPSPFQLSASVPK 26 1 O60292;M0R2Q7 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 TASAETPRPSQLAQPS(0.006)PFQLS(0.246)AS(0.747)VPK 61.869 0.0022568 7301800 1515.8 3315.2 1780.9 1680.8 5040.5 4304.5 6333.1 6257.6 8019.8 9622.3 TRUE FALSE 1631.850813 3150.571989 1840.274317 1543.473263 4842.584644 4468.310764 5501.556363 7075.489806 8717.347708 9308.325139 0.175310895 0.338468193 0.197701981 0.165816432 0.520242318 0.480033808 0.591036119 0.76012491 0.936510874 1 13.18430589 -7.432332873 0.633911054 1.019601669 0.206699762 0.929030577 0.077629705 0.189586359 0.151928788 0.073206687 0.046540136 3.70E-08 7.432332873 -0.812901907 down TASDTDSSYCIPTAGMS(ph)PSR ddPTM_A459_MK2206_30min_R1 1 TASDTDSSYCIPTAGMSPSR 20 0 Q13480-2;B7Z3B9;Q13480 Q13480-2 GAB1 GRB2-associated-binding protein 1 1 TASDTDSSYCIPT(0.001)AGMS(0.623)PS(0.376)R 125.03 0.00022963 2495500 848.9 790.77 603.62 600.75 689.54 611.59 652.69 669.99 533.8 789.14 TRUE FALSE 776.6965972 739.2907293 562.6479562 647.0198691 662.0741617 646.2176973 609.150241 664.1323481 589.2904202 886.9046209 0.875738584 0.833562834 0.634395112 0.729525874 0.746499845 0.728621412 0.686827227 0.748820485 0.664434942 1 9.792635153 -10.53429082 4.363323021 1.00001217 0.73686858 0.565200414 0.068734109 9705931.61 6695100.623 1051.74685 0.017199985 2.92E-11 10.53429082 -0.26314359 TASDTDSSYCIPTAGMS(ph)PSR ddPTM_A459_MK2206_30min_R2 3 TASDTDSSYCIPTAGMSPSR 20 0 Q13480-2;B7Z3B9;Q13480 Q13480-2 GAB1 GRB2-associated-binding protein 1 1 TASDTDSSYCIPT(0.009)AGMS(0.97)PS(0.021)R;TASDTDSSYCIPTAGMS(0.999)PS(0.001)R;TASDTDSSYCIPTAGMS(0.987)PS(0.013)R 300.5 1.53E-100 7999400 36884.2 52035.1 45622.8 49287.3 51928 53489 49825.6 43734.2 46989.5 49480.6 TRUE FALSE 39708.08271 49451.1126 47143.84138 45260.36993 49889.0458 55524.56138 43283.43887 49450.4101 51076.56177 47866.05207 0.829566697 1.033114503 0.984911839 0.945563045 1.042263643 1.159998767 0.904261726 1.033099827 1.067072791 1 15.5467152 -4.75867531 24.97954172 1.018154923 0.829566442 0.427446761 0.065739603 75.11134646 678668.0713 0.016509177 0.110826001 1.74E-05 4.75867531 -0.188588481 TASEGDGGAAAGAAAAGARPVSVAGSPLS(ph)PGPVR ddPTM_A459_MK2206_30min_R1 2 TASEGDGGAAAGAAAAGARPVSVAGSPLSPGPVR 34 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 TASEGDGGAAAGAAAAGARPVS(0.157)VAGS(0.123)PLS(0.72)PGPVR;TASEGDGGAAAGAAAAGARPVS(0.253)VAGS(0.196)PLS(0.551)PGPVR 58.249 0.00039139 15521300 2929.2 3062.8 3519.7 2873.9 1973.52 1041.35 1111.1 1405.21 2491.58 2123.62 TRUE FALSE 2680.056158 2863.411163 3280.79257 3095.248276 1894.910519 1100.310337 1036.980546 1392.924397 2750.588657 2386.710078 1.122908133 1.199731459 1.374608756 1.296868147 0.79394248 0.461015499 0.434481153 0.583616925 1.152460319 1 11.22080761 -6.336412071 4.4268408 0.67843227 1.254639067 0.559439447 0.220057371 0.159362765 5.909482605 0.071855935 0.08283945 4.61E-07 6.336412071 0.576206797 TASES(ph)ISNLSEAGSIK ddPTM_A459_MK2206_30min_R2 2 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 T(0.001)AS(0.318)ES(0.67)IS(0.009)NLS(0.001)EAGSIK;T(0.002)AS(0.304)ES(0.561)IS(0.002)NLS(0.051)EAGS(0.08)IK 157.7 7.43E-05 24668000 63525.3 74237.2 64026.1 64263.9 65676.4 68656.9 76591.9 56892.2 52410.1 59579 TRUE FALSE 68388.84581 70550.6886 66160.69822 59013.3338 63097.61454 71269.68644 66535.29153 64328.20588 56968.63576 57634.94211 1.186586527 1.224095766 1.147926862 1.023915903 1.094780566 1.236570799 1.154426275 1.116132046 0.988439195 1 15.81465611 -14.52287842 0.038795108 0.258853965 1.561284479 0.392090316 0.066315149 1073.592469 3.102818225 92.31951867 28.67336232 3.00E-15 14.52287842 1.302430513 TASESIS(ph)NLSEAGSIK ddPTM_A459_MK2206_30min_R1 2 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 T(0.001)AS(0.192)ES(0.062)IS(0.741)NLS(0.001)EAGS(0.002)IK;T(0.12)AS(0.254)ES(0.067)IS(0.54)NLS(0.009)EAGS(0.009)IK 284.07 6.03E-63 92620000 3818.6 4006.8 3755.76 3140.38 3495.6 3041.31 3241.58 3512.83 3429.95 2822.47 TRUE FALSE 3493.808018 3745.956592 3500.829475 3382.252612 3356.36285 3213.506344 3025.340113 3482.117698 3786.505577 3172.138892 1.10140449 1.180892993 1.103617967 1.066237238 1.058075628 1.01304087 0.953722462 1.097719178 1.193675846 1 11.63124023 -5.657502377 2.689269861 1.051777155 1.141836802 0.238002498 0.062845253 0.39930973 5.80986151 0.019190528 0.037554215 2.20E-06 5.657502377 0.090059647 TASESISNLS(ph)EAGSIK ddPTM_A459_MK2206_30min_R2 1 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TAS(0.012)ES(0.086)IS(0.058)NLS(0.834)EAGS(0.01)IK 157.37 7.68E-05 32282000 144480 156840 133300 132070 150990 130620 178800 97829 104620 130880 TRUE FALSE 155541.4999 149051.5537 137744.1555 121279.4585 145061.3739 135590.8356 155323.3452 110615.5862 113719.6585 126609.3963 1.228514663 1.17725507 1.087945757 0.95790251 1.145739401 1.070938173 1.226791611 0.873675963 0.898192881 1 16.95002495 -1.522878746 0.210722047 0.953864579 2.280454459 0.35639938 0.099132251 64.46471116 0.804097802 0.179213538 28.6891329 0.03 1.522878746 1.326589881 TASESISNLSEAGS(ph)IK ddPTM_A459_MK2206_30min_R1 5 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TASESISNLSEAGS(1)IK;TASESIS(0.001)NLS(0.003)EAGS(0.996)IK;TASESISNLSEAGS(1)IK;TASESISNLSEAGS(1)IK;TASESISNLSEAGS(1)IK 278.79 1.77E-62 361713000 25692.8 33421 34290.6 29365.8 20522.4 18262.46 24718.65 25815.29 28793.76 26763.75 TRUE FALSE 23507.49244 31245.28683 31963.04961 31627.559 19704.94935 19296.4647 23069.71396 25589.58964 31786.97439 30079.44541 0.781513493 1.038758741 1.062620975 1.051467491 0.655096831 0.641516638 0.766959419 0.850733426 1.056767303 1 14.87649035 -6.241413261 24.76101333 0.808621503 0.993175851 0.208813256 0.144327542 1050.72076 1299148.312 0.044768288 0.057715112 5.74E-07 6.241413261 0.184554348 TASESISNLSEAGS(ph)IK ddPTM_A459_MK2206_30min_R2 7 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TASESISNLSEAGS(1)IK;TASESISNLS(0.01)EAGS(0.99)IK;TASESISNLSEAGS(1)IK;TASESISNLS(0.008)EAGS(0.992)IK;TASESISNLSEAGS(1)IK;TASESISNLSEAGS(1)IK;TASESISNLSEAGS(1)IK 214.46 1.24E-08 241855800 347235 306276 337224 305747.2 308253 229101.3 412976 283776 261430.9 398903 TRUE FALSE 373819.5786 291066.7792 348466.8798 280766.6757 296149.4384 237819.9105 358751.7551 320866.4975 284169.6871 385886.8278 0.968728528 0.754280163 0.903028698 0.727588131 0.767451535 0.616294451 0.929681267 0.831504147 0.736406808 1 18.55781827 -10.17340945 10.7656343 1 0.801021164 0.251102669 0.101497269 0 0 0.0962984 0.023355793 6.71E-11 10.17340945 -0.198978836 TASESISNLSEAGS(ph)IKK ddPTM_A459_MK2206_30min_R2 1 TASESISNLSEAGSIKK 17 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TASESISNLSEAGS(1)IKK 83.065 0.0070253 10551000 30264 26545 20841 17801 21429 15646 28007 21554 18957 26895 TRUE FALSE 32581.03511 25226.8139 21535.82854 16346.60136 20587.58979 16241.41949 24329.64726 24371.18181 20605.84559 26017.41835 1.252277788 0.969612494 0.82774656 0.628294519 0.791300255 0.624251771 0.935129186 0.9367256 0.792001932 1 14.66719019 -4.839760592 2.160331603 0.804634823 1.338108999 0.563095623 0.1171647 0.423784463 2.539224768 0.032359491 0.424623302 1.45E-05 4.839760592 0.533474176 TASESNVYLNS(ph)FHYPDHSYK ddPTM_A459_MK2206_30min_R1 1 TASESNVYLNSFHYPDHSYK 20 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;E9PGF6;A0A1W2PRT1;A0A1W2PRJ2 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 T(0.077)AS(0.031)ES(0.088)NVY(0.019)LNS(0.721)FHY(0.064)PDHS(0.001)YK 51.166 0.044808 8446600 2205.3 1568.4 1794.9 1313 1628.3 1801.3 1818.6 1499.9 1380.4 1546.1 TRUE FALSE 2017.727655 1466.296875 1673.067189 1414.127488 1563.441363 1903.288049 1697.284512 1486.786532 1523.89752 1737.64254 1.161186842 0.843842644 0.962837379 0.81381956 0.899748554 1.095327724 0.976774263 0.855634285 0.876991374 1 10.76291561 -4.749130687 24.97991938 0.924345913 1.161187392 0.434067419 0.080903824 587.3236344 1191872.898 0.021047186 0.355779465 1.78E-05 4.749130687 0.236841479 TASFS(ph)ESR ddPTM_A459_MK2206_30min_R1 1 TASFSESR 8 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 TAS(0.146)FS(0.793)ES(0.061)R 81.525 0.043521 7008400 1502.1 1702.1 1447.4 1390.4 1462.9 1164.2 1372 1808.5 1779 2131.8 TRUE FALSE 1374.338507 1591.292981 1349.154521 1497.488849 1404.629595 1230.115998 1280.476383 1792.688475 1963.933416 2395.903478 0.573620148 0.664172407 0.563108879 0.625020525 0.586263014 0.513424689 0.53444406 0.748230674 0.819704731 1 11.22635407 -8.298239401 1.54023503 0.986813513 0.582789741 0.879795607 0.050193027 0.120903951 0.560815037 0.049054619 0.014827289 5.03E-09 8.298239401 -0.404023772 TASFS(ph)ESRADEVAPAK ddPTM_A459_MK2206_30min_R1 1 TASFSESRADEVAPAK 16 1 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.022)AS(0.169)FS(0.778)ES(0.032)RADEVAPAK 83.666 0.0099774 17888000 2683.6 2672.1 3052.3 3392.3 3812.7 3185 3105 5545.9 3122.4 1840.4 TRUE FALSE 2455.345728 2498.145804 2845.11838 3653.575534 3660.832085 3365.331948 2897.871115 5497.412781 3446.984654 2068.402646 1.187073384 1.207765717 1.375514765 1.766375391 1.769883679 1.627019746 1.401018859 2.657805912 1.66649596 1 11.01430134 -5.631289291 2.9103114 1.757733133 1.204705099 0.207441035 0.392457139 0.360231238 6.094781501 0.110571595 0.216050169 2.34E-06 5.631289291 -0.553028033 TASGSSVTS(ph)LDGTR ddPTM_A459_MK2206_30min_R2 2 TASGSSVTSLDGTR 14 0 E5RJY1;E7ESM1;Q92597-3;Q92597-2;Q92597 E5RJY1 NDRG1 Protein NDRG1 1 TASGS(0.004)S(0.029)VT(0.258)S(0.709)LDGTR;TASGS(0.001)S(0.021)VT(0.289)S(0.69)LDGTR 148.89 0.0004507 22813000 93412 109029 124213 144851 155329 118094 178600 143932 149483 177279 TRUE FALSE 100563.6945 103614.7784 128354.1994 133016.2099 149230.003 122588.1499 155149.6055 162744.4066 162484.7611 171494.4007 0.586396373 0.60418753 0.748445424 0.775630046 0.8701742 0.714823046 0.90469196 0.94897796 0.947463943 1 17.38780195 -4.015176573 0.230106554 1.025046875 1.96E-19 0.860018458 0.05201569 5.943419919 0.20624687 0.087138607 1.833614454 9.66E-05 4.015176573 -1.025046875 TASIS(ph)SSPSEGTPTVGSYGCTPQSLPK ddPTM_A459_MK2206_30min_R1 1 TASISSSPSEGTPTVGSYGCTPQSLPK 27 0 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 T(0.395)AS(0.009)IS(0.573)S(0.019)S(0.003)PSEGTPTVGSYGCTPQSLPK 247.7 1.75E-62 24407000 9081 10711 9321.7 8342.2 8088.3 4625.4 5067.7 4738.6 4285.5 3230.4 TRUE FALSE 8308.613264 10013.71195 8688.968976 8984.717689 7766.125884 4887.286151 4729.64298 4697.17092 4730.993061 3630.60634 2.288491917 2.758137626 2.393255606 2.474715474 2.139071316 1.346134968 1.30271435 1.293770373 1.303086211 1 11.82599479 -6.669215354 2.325988654 1.243371328 2.494930516 0.94628171 0.140338514 0.060065072 0.664250427 0.05049952 0.049419576 2.14E-07 6.669215354 1.251559188 up TASISS(ph)SPSEGTPTVGSYGCTPQSLPK ddPTM_A459_MK2206_30min_R1 1 TASISSSPSEGTPTVGSYGCTPQSLPK 27 0 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 T(0.015)AS(0.004)IS(0.062)S(0.269)S(0.269)PS(0.186)EGT(0.193)PT(0.002)VGSYGCTPQSLPK 119.69 5.34E-12 6060900 1978.6 1871.4 2097.5 2534.7 2367.4 2376.2 2347.7 2144.9 2327.7 1851.1 TRUE FALSE 1810.30968 1749.57152 1955.127544 2729.923033 2273.101445 2510.738391 2191.089217 2126.147365 2569.672745 2080.428243 0.870162038 0.84096701 0.939771679 1.312192834 1.092612279 1.206837294 1.05319144 1.021975823 1.235165285 1 11.02266481 -5.567674927 8.91110833 1.130855511 0.864069917 0.607099091 0.093055832 0.180206886 33.3759414 0.024603711 0.042794225 2.71E-06 5.567674927 -0.266785595 TASISSS(ph)PSEGTPTVGSYGCTPQSLPK ddPTM_A459_MK2206_30min_R2 1 TASISSSPSEGTPTVGSYGCTPQSLPK 27 0 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 T(0.041)AS(0.007)IS(0.236)S(0.236)S(0.48)PS(0.001)EGTPTVGSYGCTPQSLPK 185.48 1.88E-28 23144000 71472 75984 61096 63126 54039 45831 58690 39634 39430 49834 TRUE FALSE 76943.95127 72210.74505 63132.91015 57968.40387 51917.15734 47575.13082 50983.9325 44814.29988 42859.55013 48207.92066 1.596085254 1.497902089 1.309596209 1.202466381 1.076942474 0.986873737 1.057584144 0.929604498 0.889056187 1 15.55698258 -5.399932851 0.629011494 0.943092933 1.785602144 0.969826222 0.039903 0.281591931 0.141020501 0.022044812 0.154419383 3.98E-06 5.399932851 0.842509211 TASLT(ph)SAASVDGNR ddPTM_A459_MK2206_30min_R1 1 TASLTSAASVDGNR 14 0 G3V578;H0YJT9;A0A0A0MS87;Q9UN36-4;Q9UN36-5;Q9UN36-2;Q9UN36-3;Q9UN36-6;Q9UN36 G3V578 NDRG2 Protein NDRG2 1 T(0.001)AS(0.203)LT(0.762)S(0.033)AASVDGNR 231.07 8.44E-52 0 2087.2 2292.4 1908.5 1439.8 1989.2 1679.6 1931 1518.9 1661.2 1448.4 TRUE FALSE 1909.67268 2143.164343 1778.956337 1550.693645 1909.965952 1774.697501 1802.186513 1505.620417 1833.887685 1627.838727 1.17313383 1.316570437 1.092833281 0.952608892 1.17331399 1.090217029 1.107103845 0.924919891 1.126578238 1 10.66874206 -5.390132394 5.693424435 1.05673344 1.242847923 0.468997599 0.080065719 0.182305646 7.591860113 0.020533933 0.043594818 4.07E-06 5.390132394 0.186114483 TASLTSAAS(ph)VDGNR ddPTM_A459_MK2206_30min_R2 1 TASLTSAASVDGNR 14 0 G3V578;H0YJT9;A0A0A0MS87;Q9UN36-4;Q9UN36-5;Q9UN36-2;Q9UN36-3;Q9UN36-6;Q9UN36 G3V578 NDRG2 Protein NDRG2 1 TASLTSAAS(1)VDGNR 153.09 0.00037006 3685200 12129 14356 10088 14671 14786 16649 16481 13307 16691 14531 TRUE FALSE 13057.60557 13643.10192 10424.32889 13472.33237 14205.42735 17282.58936 14317.0249 15046.27059 18142.75301 14056.85466 0.928913749 0.970565766 0.741583316 0.958417277 1.010569412 1.229477702 1.018508425 1.070386723 1.29066946 1 13.77898619 -6.362012716 2.65092047 1.119208374 0.889032672 0.510128615 0.101952647 0.230825888 3.162188243 0.033606146 0.039618781 4.34E-07 6.362012716 -0.230175703 TASPLPLRPDAPVEKS(ph)PEETATQVPSLESLTLK ddPTM_A459_MK2206_30min_R1 1 TASPLPLRPDAPVEKSPEETATQVPSLESLTLK 33 2 Q9HCK8-2;Q9HCK8;H0YJG4 Q9HCK8-2 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 T(0.075)AS(0.071)PLPLRPDAPVEKS(0.444)PEET(0.185)AT(0.221)QVPS(0.004)LESLTLK 45.748 0.0073704 8539200 1757.4 1689.5 1960.3 1397.3 1458.3 1389 1172.2 1169.8 1891.2 1664.3 TRUE FALSE 1607.923902 1579.513243 1827.240298 1504.920288 1400.212823 1467.64398 1094.004677 1159.572562 2087.797008 1870.486049 0.85962892 0.844440002 0.976879939 0.804561087 0.74858234 0.784632412 0.584877218 0.619931147 1.116178872 1 10.86919749 -2.732187584 9.430162076 0.816195554 0.941048421 0 0.158116657 0 0 0.036486166 0 0.001852731 2.732187584 0.124852867 TASQGPQT(ph)DSVIQNSENIK ddPTM_A459_MK2206_30min_R2 1 TASQGPQTDSVIQNSENIK 19 0 Q9NZN5-2;E9PMR6;Q9NZN5 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 T(0.013)AS(0.159)QGPQT(0.467)DS(0.361)VIQNSENIK 209.19 4.24E-16 8951700 17553 22716 19541 21870 18614 19474 39658 23388 34961 44236 TRUE FALSE 18896.87118 21587.95647 20192.48719 20083.15104 17883.12083 20215.09672 34450.85696 26444.8919 38001.84458 42792.58294 0.441592208 0.50447893 0.471868857 0.469313831 0.417902347 0.472397208 0.805066079 0.617978399 0.88804746 1 15.38507314 -7.928390445 0.757147741 0.992658604 0.451424408 0.85071743 0.077439844 0.23130599 0.261895432 0.072624784 0.031893833 1.18E-08 7.928390445 -0.541234196 down TASRPAPLVQQLS(ph)PSLLPNSK ddPTM_A459_MK2206_30min_R2 2 TASRPAPLVQQLSPSLLPNSK 21 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 TASRPAPLVQQLS(0.99)PS(0.01)LLPNSK;TASRPAPLVQQLS(0.975)PS(0.016)LLPNS(0.009)K 83.435 0.00074753 20199000 88342 102099 89355 99640 95353 92606 108007 78867 80418 104521 TRUE FALSE 95105.53144 97028.91213 92334.0511 91499.09327 91608.96211 96130.18622 93825.55116 89175.18769 87412.61228 101110.4883 0.940609951 0.959632514 0.913199537 0.904941661 0.906028283 0.950743961 0.927950727 0.881957838 0.864525666 1 16.62557313 -5.269633893 23.68537502 0.914988051 0.950121233 0.104197532 0.035603835 533.8841527 1543147.183 0.009169437 0.019656375 5.37E-06 5.269633893 0.035133182 TASRPDDIPDS(ph)PSSPK ddPTM_A459_MK2206_30min_R1 2 TASRPDDIPDSPSSPK 16 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 TASRPDDIPDS(0.999)PS(0.001)SPK;TAS(0.002)RPDDIPDS(0.474)PS(0.474)S(0.049)PK 218.36 5.32E-10 7049600 2380.41 2366.09 2004.34 1948.61 1676.33 1329.38 1777.76 1480.4 1891.84 1502.91 TRUE FALSE 2177.943629 2212.057111 1868.290985 2098.69228 1609.558226 1404.648347 1659.168874 1467.457019 2088.503538 1689.101837 1.289409307 1.309605533 1.106085462 1.242490082 0.952907747 0.831594825 0.982278769 0.868779482 1.236458035 1 10.7220406 -6.261142896 24.99232266 0.964935476 1.232747306 0.554366943 0.112996061 19.87416533 1675290.824 0.034062357 0.041303416 5.48E-07 6.261142896 0.26781183 TASRPDDIPDS(ph)PSSPK ddPTM_A459_MK2206_30min_R2 1 TASRPDDIPDSPSSPK 16 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 TASRPDDIPDS(0.408)PS(0.408)S(0.184)PK 157.37 0.0003646 3534100 16422 16654 16220 15993 17157 11920 14637 12088 10597 16368 TRUE FALSE 17679.28095 15826.98658 16760.7667 14686.32074 16483.32997 12373.62395 12715.14432 13667.9431 11518.70791 15833.9135 1.116545252 0.999562526 1.058535952 0.927523113 1.041014274 0.781463405 0.803032322 0.863206882 0.727470685 1 13.95073025 -6.757029097 24.99927061 0.824484933 1.023064745 0.592233304 0.080017085 74.03468157 419658.724 0.025403313 0.024571525 1.75E-07 6.757029097 0.198579813 TASRPDDIPDSPS(ph)SPK ddPTM_A459_MK2206_30min_R2 2 TASRPDDIPDSPSSPK 16 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 TASRPDDIPDSPS(0.708)S(0.292)PK;TASRPDDIPDSPS(0.915)S(0.085)PK 211.9 1.60E-07 17038400 98333 83295 85895 65882 64789 45580 73165 54083 45019 74218 TRUE FALSE 105861.4501 79158.69142 88758.69643 60499.22985 62245.05832 47314.57884 63558.34761 61151.83379 48934.67124 71796.27274 1.474469998 1.102545974 1.23625772 0.842651402 0.866967824 0.659011632 0.88525971 0.851741065 0.681576764 1 16.13162133 -5.408110413 1.033034845 0.80152226 1.439502034 0.724790833 0.12533117 0.414148818 0.675958913 0.042597074 0.233329961 3.91E-06 5.408110413 0.637979774 TASRPDDIPDSPSS(ph)PK ddPTM_A459_MK2206_30min_R2 3 TASRPDDIPDSPSSPK 16 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 TASRPDDIPDSPS(0.298)S(0.702)PK;TASRPDDIPDS(0.028)PS(0.267)S(0.705)PK;TASRPDDIPDS(0.001)PS(0.083)S(0.916)PK 189.44 4.57E-06 63129000 559062 520667 499756 397742 392971 260425 441247 346567 252024 446657 TRUE FALSE 601864.2166 494811.4339 516417.6156 365245.2063 377540.984 270335.6559 383310.7389 391864.4968 273944.592 432082.6187 1.39293781 1.145177826 1.195182572 0.845313351 0.873770357 0.625657326 0.887123717 0.906920297 0.634009748 1 18.72094767 -5.672286498 1.740254702 0.805984251 1.289943519 0.705275971 0.124334468 0.194353826 1.183096011 0.037029475 0.08665599 2.13E-06 5.672286498 0.483959269 TASTPT(ph)PPQTGGGLEPQANGETPQVAVIVRPDDR ddPTM_A459_MK2206_30min_R1 2 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR 34 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73;C9J2Z7;C9JF13;C9K073;C9J556;C9JWW9;C9JSU8;C9J6B6;C9JWH7 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 T(0.001)AS(0.014)T(0.05)PT(0.518)PPQT(0.416)GGGLEPQANGET(0.002)PQVAVIVRPDDR;TAS(0.003)T(0.012)PT(0.914)PPQT(0.042)GGGLEPQANGET(0.029)PQVAVIVRPDDR 105.77 8.70E-14 228800000 1685.38 2108.26 1922.11 1188.65 2154.84 1795.64 1842.25 1590.32 1854.51 1468.37 TRUE FALSE 1542.029581 1971.011891 1791.642529 1280.200029 2069.00816 1897.307585 1719.356864 1576.416 2047.292951 1650.282761 0.934403253 1.194347985 1.085657907 0.775745866 1.253729487 1.149686363 1.04185592 0.955239936 1.240571009 1 10.68849752 TASTPT(ph)PPQTGGGLEPQANGETPQVAVIVRPDDR ddPTM_A459_MK2206_30min_R2 3 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR 34 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73;C9J2Z7;C9JF13;C9K073;C9J556;C9JWW9;C9JSU8;C9J6B6;C9JWH7 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 T(0.001)AS(0.016)T(0.044)PT(0.512)PPQT(0.427)GGGLEPQANGET(0.001)PQVAVIVRPDDR;T(0.005)AS(0.04)T(0.104)PT(0.621)PPQT(0.177)GGGLEPQANGET(0.053)PQVAVIVRPDDR;T(0.004)AS(0.035)T(0.105)PT(0.661)PPQT(0.193)GGGLEPQANGET(0.001)PQVAVIVRPDDR 78.942 7.47E-06 509430000 43011.9 48026 47568 51806 61854 60034 64239 48242.1 58536 62404 TRUE FALSE 46304.92413 45641.09868 49153.89338 47573.28408 59425.30117 62318.63594 55804.34214 54547.50811 63627.35547 60367.76259 0.767047214 0.756050858 0.814240768 0.788057765 0.984388001 1.032316476 0.924406334 0.903586712 1.053995589 1 15.88149071 -6.25520053 9.367511832 0.977870832 0.781765173 0.832398989 0.044316013 0.066209737 76.10108214 0.013781794 0.016958205 5.56E-07 6.25520053 -0.19610566 TASTPTPPQT(ph)GGGLEPQANGETPQVAVIVRPDDR ddPTM_A459_MK2206_30min_R1 1 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR 34 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73;C9J2Z7;C9JF13;C9K073;C9J556;C9JWW9;C9JSU8;C9J6B6;C9JWH7 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 TAS(0.002)T(0.006)PT(0.06)PPQT(0.929)GGGLEPQANGET(0.003)PQVAVIVRPDDR 76.439 1.10E-05 76453000 1765.4 1897.2 2131 1410.8 1822.3 1938.4 1854.2 1907.8 1470.3 1812.2 TRUE FALSE 1615.24346 1773.691935 1986.353657 1519.46006 1749.713932 2048.150533 1730.509701 1891.120306 1623.142947 2036.709017 0.793065404 0.870861728 0.975276115 0.74603689 0.859088813 1.005617649 0.849659763 0.928517667 0.796943958 1 10.99202416 -6.553763378 24.99671906 0.910283397 0.850436391 0.148660016 0.08011496 455.3731286 368556.7496 0.025997122 0.025997379 2.79E-07 6.553763378 -0.059847006 TASTPTPPQT(ph)GGGLEPQANGETPQVAVIVRPDDR ddPTM_A459_MK2206_30min_R2 1 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR 34 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73;C9J2Z7;C9JF13;C9K073;C9J556;C9JWW9;C9JSU8;C9J6B6;C9JWH7 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 T(0.001)AS(0.016)T(0.084)PT(0.099)PPQT(0.71)GGGLEPQANGET(0.09)PQVAVIVRPDDR 49.968 0.013228 22642000 15775 16748 10560 18369 19973 19528 19415 9092.7 20067 21429 TRUE FALSE 16982.74613 15916.31867 10912.06513 16868.19394 19188.75966 20271.15172 16865.78718 10281.14711 21812.39139 20729.77348 0.819244173 0.767799932 0.526395773 0.813718199 0.925661811 0.977876181 0.813602097 0.495960417 1.052225264 1 14.33941673 -5.983219889 24.9310745 0.855581664 0.70401943 0.180283963 0.161051892 459.1465731 682172.2911 0.046281896 0.068629436 1.04E-06 5.983219889 -0.151562234 TASTPTPPQTGGGLEPQANGET(ph)PQVAVIVRPDDR ddPTM_A459_MK2206_30min_R1 1 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR 34 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-7;Q04637-5;Q04637-4;Q04637-6;E9PGM1;E7EX73;C9J2Z7;C9JF13;C9K073;C9J556;C9JWW9;C9JSU8;C9J6B6;C9JWH7 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 TAST(0.001)PT(0.004)PPQT(0.059)GGGLEPQANGET(0.936)PQVAVIVRPDDR 75.103 1.28E-05 66837000 836.12 952.4 1169.9 992.21 981.91 1190.1 1235.4 913.67 1074 882.05 TRUE FALSE 765.0036034 890.3985869 1090.490448 1068.630186 942.7984455 1257.482434 1152.98872 905.6818795 1185.646143 991.3250131 0.771698074 0.898190377 1.100033221 1.077981663 0.951048781 1.268486538 1.16307841 0.913607412 1.196021615 1 9.953214323 -5.052264472 2.513203968 1.086146872 0.768180164 0.495378805 0.103910145 0.272104865 3.043171208 0.027636236 0.142755838 8.87E-06 5.052264472 -0.317966708 TATCHSSS(ph)SPPIDAASAEPYGFR ddPTM_A459_MK2206_30min_R1 3 TATCHSSSSPPIDAASAEPYGFR 23 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TATCHS(0.006)S(0.025)S(0.54)S(0.429)PPIDAASAEPYGFR;TATCHS(0.022)S(0.028)S(0.803)S(0.147)PPIDAASAEPYGFR;T(0.001)AT(0.004)CHS(0.01)S(0.04)S(0.897)S(0.048)PPIDAASAEPYGFR 129.22 5.56E-06 999409000 6088.2 5601.2 5880.4 4439.9 7022.4 5930.04 6422.2 5569.6 4930.4 4514 TRUE FALSE 5570.36662 5236.560862 5481.254832 4781.861867 6742.682938 6265.79374 5993.786756 5520.905574 5442.932724 5073.228399 1.097992478 1.032194975 1.080427373 0.942567827 1.329071433 1.235070304 1.181454152 1.088243056 1.072873582 1 12.3086884 -3.681386174 10.6305367 1.113019852 1.116141268 0 0.10868836 0 0 0.026250517 0 0.000208264 3.681386174 0.003121416 TATCHSSS(ph)SPPIDAASAEPYGFR ddPTM_A459_MK2206_30min_R2 1 TATCHSSSSPPIDAASAEPYGFR 23 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TATCHSS(0.004)S(0.8)S(0.196)PPIDAASAEPYGFR 95.444 5.15E-05 73689000 30399 58332 30699 70040 76753 89314 70712 52205 60646 39892 TRUE FALSE 32726.37081 55435.3177 31722.48934 64317.50795 73739.29157 92712.90686 61427.42946 59028.37275 65920.87946 38590.32731 0.848045951 1.436508099 0.82203214 1.666674331 1.91082317 2.402490814 1.591783064 1.529615758 1.708222865 1 15.23595166 -5.846053765 6.648818285 1.749668903 1.078057309 0.391732625 0.36595528 0.207892065 13.34342927 0.103188841 0.154711708 1.43E-06 5.846053765 -0.671611594 TATCHSSSS(ph)PPIDAASAEPYGFR ddPTM_A459_MK2206_30min_R1 5 TATCHSSSSPPIDAASAEPYGFR 23 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TATCHSSS(0.313)S(0.687)PPIDAASAEPYGFR;TATCHSS(0.034)S(0.199)S(0.768)PPIDAASAEPYGFR;T(0.017)AT(0.014)CHS(0.039)S(0.134)S(0.231)S(0.566)PPIDAASAEPYGFR;TATCHSSS(0.059)S(0.941)PPIDAASAEPYGFR;TATCHSSS(0.167)S(0.832)PPIDAASAEPYGFR 155.47 1.47E-09 1159096500 9284.3 6252.34 6494.84 5079.23 13510.85 12610.08 11596.97 8725.8 5819.37 5517.5 TRUE FALSE 8494.621531 5845.31153 6053.988356 5470.433175 12972.68423 13324.05183 10823.35729 8649.511251 6424.314336 6201.049555 1.369868351 0.94263261 0.976284466 0.882178594 2.092014282 2.148676883 1.745407321 1.394846336 1.036004354 1 12.5982967 -6.240724387 24.78409496 1.626988938 1.030843472 0.308562585 0.38032816 873.5231468 1045111.344 0.119466035 0.154053192 5.74E-07 6.240724387 -0.596145467 TATCHSSSS(ph)PPIDAASAEPYGFR ddPTM_A459_MK2206_30min_R2 7 TATCHSSSSPPIDAASAEPYGFR 23 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.001)AT(0.001)CHS(0.001)S(0.02)S(0.461)S(0.516)PPIDAASAEPYGFR;TATCHSS(0.002)S(0.166)S(0.832)PPIDAASAEPYGFR;T(0.117)AT(0.117)CHS(0.117)S(0.117)S(0.117)S(0.414)PPIDAASAEPYGFR;TATCHSS(0.001)S(0.233)S(0.766)PPIDAASAEPYGFR;T(0.104)AT(0.104)CHS(0.022)S(0.022)S(0.137)S(0.61)PPIDAASAEPYGFR;TATCHSS(0.008)S(0.102)S(0.89)PPIDAASAEPYGFR;T(0.001)AT(0.001)CHS(0.002)S(0.024)S(0.434)S(0.54)PPIDAASAEPYGFR 91.655 9.44E-05 1954811800 206814.6 373982.3 247487.5 464191.6 439893.8 571359.2 436369.2 334775.4 401898 276391.1 TRUE FALSE 222648.4848 355410.8828 255738.6097 426265.6614 422621.3591 593102.6747 379073.3999 378531.6942 436854.3616 267372.481 0.832727751 1.329272487 0.95648815 1.594276493 1.580646436 2.218263721 1.417772683 1.41574665 1.633879298 1 18.02849146 -5.76885824 24.95091391 1.5922578 1.068473749 0.362759714 0.30696225 166.5497871 560137.5082 0.085119741 0.129133593 1.70E-06 5.76885824 -0.523784051 TATES(ph)FASDPILYRPVAVALDTK ddPTM_A459_MK2206_30min_R1 2 TATESFASDPILYRPVAVALDTK 23 1 P14618;P14618-3;H3BQ34;H3BUW1;H3BTJ2;H3BT25;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 T(0.009)AT(0.039)ES(0.912)FAS(0.039)DPILY(0.001)RPVAVALDTK;T(0.01)AT(0.045)ES(0.931)FAS(0.014)DPILY(0.001)RPVAVALDTK 96.317 3.99E-05 49572000 8006 7611.4 7077.8 5509 6177.4 6583 7130.7 5912 6360 5291.6 TRUE FALSE 7325.047659 7115.896477 6597.378656 5933.304135 5931.341077 6955.723771 6655.024014 5860.312007 7021.144759 5947.163358 1.23168765 1.196519424 1.109332006 0.997669608 0.997339525 1.169586802 1.119024922 0.985396172 1.18058717 1 12.53798599 -5.294245573 3.022240308 1.066922433 1.222202849 0.424414229 0.068939804 0.247748607 4.509217474 0.018728372 0.052158314 5.08E-06 5.294245573 0.155280416 TATESFASDPILYRPVAVALDTK ddPTM_A459_MK2206_30min_R1 2 TATESFASDPILYRPVAVALDTK 23 1 P14618;P14618-3;H3BQ34;H3BUW1;H3BTJ2;H3BT25;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 174.7 8.17E-13 92308000 10324.4 10105.7 9686.5 10230.8 9620 9548 9875.3 9990.6 8949.8 9450.6 FALSE TRUE 9446.255564 9447.817093 9029.007368 11018.77799 9236.815029 10088.59951 9216.536756 9903.253238 9880.163737 10621.41168 0.889359706 0.889506723 0.85007602 1.037411817 0.869640996 0.949836031 0.867731808 0.932385783 0.930211919 1 13.3746879 -14.52287875 0.173838413 1.342771388 0.893855634 0.22394372 0.050861118 210.0266712 1.991496746 24.84568448 0.169668987 3.00E-15 14.52287875 -0.448915754 TATESFASDPILYRPVAVALDTK ddPTM_A459_MK2206_30min_R2 4 TATESFASDPILYRPVAVALDTK 23 1 P14618;P14618-3;H3BQ34;H3BUW1;H3BTJ2;H3BT25;P14618-2;H3BTN5 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;; 97.488 0.00018428 21918000 82276.2 96655 87457.5 93123.5 92073.5 74727.8 94454 77707 81896.5 93519.9 FALSE TRUE 88575.32913 91855.25325 90373.2894 85515.01216 88458.23176 77571.61879 82052.07634 87863.57171 89019.70954 90468.35332 0.979075289 1.015330222 0.998949202 0.945247802 0.977780942 0.857444796 0.906969933 0.971207814 0.983987287 1 16.46512559 -5.765210564 6.153741273 0.943213146 0.999879288 0.227361975 0.040259025 0.206233085 30.46980365 0.011879521 0.019108589 1.72E-06 5.765210564 0.056666143 TATNDEESPLSVS(ph)SPEGTGTWLHYTSGVGTGR ddPTM_A459_MK2206_30min_R1 2 TATNDEESPLSVSSPEGTGTWLHYTSGVGTGR 32 0 A0A087WZV0;O43314;O43314-2;A0A087WWN8 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 TATNDEESPLSVS(0.499)S(0.499)PEGT(0.001)GTWLHYTSGVGTGR;TATNDEESPLS(0.001)VS(0.841)S(0.158)PEGTGTWLHYTSGVGTGR 183.79 3.61E-35 15385900 1392.12 871.89 961.04 1099.01 1836.32 2917.8 3317.4 2642.96 1897.91 2291.16 TRUE FALSE 1273.712884 815.1298025 895.8072824 1183.655941 1763.175486 3083.003314 3096.102299 2619.852879 2095.204536 2575.006198 0.494644589 0.316554501 0.347885486 0.459671103 0.684726696 1.197279959 1.202366931 1.017416145 0.813669706 1 11.33036019 -6.50269313 2.890604341 1.055569352 0.394578955 0.869835555 0.116682648 0.093604082 1.57971741 0.043098527 0.046560186 3.14E-07 6.50269313 -0.660990397 down TATNDEESPLSVS(ph)SPEGTGTWLHYTSGVGTGR ddPTM_A459_MK2206_30min_R2 1 TATNDEESPLSVSSPEGTGTWLHYTSGVGTGR 32 0 A0A087WZV0;O43314;O43314-2;A0A087WWN8 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 TATNDEES(0.001)PLS(0.05)VS(0.475)S(0.475)PEGT(0.001)GTWLHYTSGVGTGR 97.482 6.18E-09 5103000 7912.2 12146 12096 15960 19085 22134 24947 17789 21378 20907 TRUE FALSE 8517.964115 11542.8473 12499.2746 14656.01695 18335.62701 22976.32488 21671.42893 20114.08338 23237.4198 20224.8063 0.421164188 0.570727211 0.618017024 0.724655491 0.906590982 1.136046721 1.071527144 0.99452539 1.148956358 1 14.30383827 -6.084716804 1.183437081 1.07657742 0.491948162 0.934132071 0.062730889 0.11148796 0.318991099 0.024807302 0.043927322 8.23E-07 6.084716804 -0.584629258 down TATNNASSSCQST(ph)PR ddPTM_A459_MK2206_30min_R1 2 TATNNASSSCQSTPR 15 0 Q92833-2;Q92833-3;Q92833 Q92833-2 JARID2 Protein Jumonji 1 TATNNASSSCQS(0.242)T(0.758)PR;TATNNASSSCQS(0.04)T(0.96)PR 145.94 0.00082597 1549950 607.79 963.47 566.29 461.94 683.33 790.39 437.11 661.26 614.9 491.47 TRUE FALSE 556.0942689 900.7479279 527.8518126 497.5186988 656.1115191 835.1411988 407.9511895 655.4786735 678.8210554 552.357014 1.006766013 1.630735023 0.955635213 0.900719437 1.187839572 1.511959073 0.738564333 1.186693854 1.228953445 1 9.109457239 -6.657710603 0.019232119 1.31E-06 2.29312212 0.02564352 0.257598074 3189.432224 22.38438204 1257.055851 1408.254568 2.20E-07 6.657710603 2.293120808 TATNNASSSCQST(ph)PR ddPTM_A459_MK2206_30min_R2 2 TATNNASSSCQSTPR 15 0 Q92833-2;Q92833-3;Q92833 Q92833-2 JARID2 Protein Jumonji 1 TATNNASSSCQS(0.243)T(0.757)PR;TATNNASSSCQS(0.001)T(0.999)PR 229.69 1.96E-51 4628500 16171.3 19897.5 11588.4 23993 15185.9 18432.6 35934 31956 14720.5 19716.1 TRUE FALSE 17409.38716 18909.41908 11974.75147 22032.69515 14589.62526 19134.06551 31215.82264 36132.75892 16000.86248 19072.76527 0.912787785 0.991435632 0.627845585 1.155191438 0.764945463 1.003214019 1.636669995 1.89446881 0.838937734 1 14.21922641 -7.115611207 5.587158632 1.41402676 0.895222887 0.316214513 0.308156215 0.239755991 10.1359211 0.115584744 0.089354758 7.66E-08 7.115611207 -0.518803872 TATPPGYKPGS(ph)PPSFR ddPTM_A459_MK2206_30min_R1 1 TATPPGYKPGSPPSFR 16 1 P54259 P54259 ATN1 Atrophin-1 1 TATPPGYKPGS(0.971)PPS(0.029)FR 99.044 0.032094 21242000 1764.8 1553 1652.5 1698.4 1519.5 1395.6 1507.7 1759.7 1512.7 1403.9 TRUE FALSE 1614.694493 1451.899418 1540.332904 1829.211062 1458.975097 1474.617666 1407.124084 1744.315128 1669.950578 1577.825731 1.023366815 0.920189974 0.976237663 1.159323889 0.924674423 0.934588426 0.891812103 1.105518242 1.058387213 1 10.62372215 -7.780038762 24.998469 1.061464532 0.977138218 0.18703823 0.074929442 428.1592151 575458.638 0.042502737 0.020475887 1.66E-08 7.780038762 -0.084326314 TATPQQAQEVHEK ddPTM_A459_MK2206_30min_R1 3 TATPQQAQEVHEK 13 0 P60174;P60174-3;P60174-4;U3KPZ0 P60174 TPI1 Triosephosphate isomerase 0 ;; 164.92 0.0005094 60536000 19967 16987.1 19528.2 15778.5 22657.9 20222.5 21568.7 19355.7 15472.3 13840.4 FALSE TRUE 18268.7018 15881.2367 18202.68019 16993.7628 21755.38786 21367.48047 20129.89138 19186.47516 17080.70095 15555.05324 1.174454469 1.020969614 1.170210086 1.092491459 1.398605812 1.373668103 1.294106234 1.23345609 1.09808052 1 13.92509571 -6.214898019 24.9739256 1.254749155 1.111825408 0.178014367 0.119264744 608.3551625 326440.8705 0.035315912 0.045592546 6.10E-07 6.214898019 -0.142923747 TATPQQAQEVHEK ddPTM_A459_MK2206_30min_R2 4 TATPQQAQEVHEK 13 0 P60174;P60174-3;P60174-4;U3KPZ0 P60174 TPI1 Triosephosphate isomerase 0 ;;; 150.9 0.00067431 66825000 286497 326075 310421 365850 323367 278234 374208 292421 284561 326642 FALSE TRUE 308431.4306 309882.5897 320770.2812 335958.8847 310669.9868 288822.3898 325074.0401 330641.4287 309311.6014 315983.6983 0.976099186 0.980691698 1.015148196 1.063215876 0.98318359 0.914042058 1.028768389 1.046387616 0.97888468 1 18.26949061 -5.170927483 6.352950952 1.00440951 0.977631766 0.063059689 0.039017404 0.77081571 44.6049945 0.010680218 0.029063008 6.75E-06 5.170927483 -0.026777744 TATSLPVVNFGS(ph)PLR ddPTM_A459_MK2206_30min_R2 1 TATSLPVVNFGSPLR 15 0 Q96T17-5;Q96T17;Q96T17-2;Q96T17-4 Q96T17-5 MAP7D2 MAP7 domain-containing protein 2 1 TATSLPVVNFGS(1)PLR 98.281 0.014597 0 9413.5 10203 7806.1 12119 9047.5 12340 9035.6 8194.8 6947.1 8522.5 TRUE FALSE 10134.2048 9696.333857 8066.351478 11128.83893 8692.24969 12809.60735 7849.214866 9265.888497 7551.346201 8244.411523 1.229221124 1.176109881 0.978402334 1.34986456 1.05432021 1.553732163 0.952064904 1.123899319 0.915935137 1 13.0092008 TATSLPVVNFGS(ph)PLRR ddPTM_A459_MK2206_30min_R1 2 TATSLPVVNFGSPLRR 16 1 Q96T17-5;Q96T17;Q96T17-2;Q96T17-4 Q96T17-5 MAP7D2 MAP7 domain-containing protein 2 1 TATSLPVVNFGS(1)PLRR;TATSLPVVNFGS(1)PLRR 149.72 0.00012881 18091400 6208.6 5581.4 5810 4964.7 5271.2 4793.2 5170.5 5373 4757.6 4343.7 TRUE FALSE 5680.525967 5218.049846 5415.633388 5347.082054 5061.236942 5064.586842 4825.585379 5326.024427 5252.169545 4881.830349 1.163605771 1.068871606 1.109344856 1.095302719 1.036749862 1.03743606 0.988478713 1.090989249 1.075860726 1 12.25320644 -6.180825366 3.67260781 1.040058034 1.108590498 0.488463741 0.035780091 0.234706415 6.063509812 0.011131612 0.014553906 6.59E-07 6.180825366 0.068532464 TATYNGPPAS(ph)PSLSHEATPLSQTR ddPTM_A459_MK2206_30min_R1 2 TATYNGPPASPSLSHEATPLSQTR 24 0 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YIY6;P27448-6;P27448-7;A2SY06 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 TATYNGPPAS(0.911)PS(0.084)LS(0.005)HEATPLSQTR;TATYNGPPAS(0.962)PS(0.038)LSHEATPLSQTR 142.95 1.35E-08 18847100 3302.5 2139.71 2705.9 1973.55 3028 3296.5 3551.2 2660.9 2052.5 1983.4 TRUE FALSE 3021.605033 2000.41449 2522.231047 2125.553163 2907.388348 3483.144981 3314.305928 2637.636032 2265.86472 2229.118566 1.355515619 0.897401565 1.131492549 0.953539751 1.304277122 1.562566045 1.486823527 1.183264126 1.016484612 1 11.12225764 -6.281706095 23.85689876 1.294645034 1.074481617 0.135706984 0.203375587 743.70319 875445.0235 0.064986139 0.073792606 5.23E-07 6.281706095 -0.220163416 TATYNGPPAS(ph)PSLSHEATPLSQTR ddPTM_A459_MK2206_30min_R2 4 TATYNGPPASPSLSHEATPLSQTR 24 0 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YIY6;P27448-6;P27448-7;A2SY06 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 TATYNGPPAS(0.546)PS(0.445)LS(0.009)HEATPLSQTR;TATY(0.001)NGPPAS(0.997)PS(0.002)LSHEATPLSQTR;TATYNGPPAS(1)PSLSHEATPLSQTR;TATYNGPPAS(1)PSLSHEATPLSQTR 185.04 1.67E-21 38158400 48403.6 72784 57037.5 83425 69627 82004 86257 62569 66596 59514.2 TRUE FALSE 52109.41683 69169.6524 58939.10178 76608.91064 66893.09413 85124.71968 74931.35229 70746.98313 72388.3997 57572.25653 0.90511333 1.201440704 1.023741388 1.33065673 1.161898077 1.478571882 1.301518419 1.228838114 1.257348662 1 15.81308614 -3.924926784 0.759589045 1.264167034 4.91E-13 0.331324413 0.133704999 9.28905801 1.572469216 0.048589369 13.53727214 0.00011887 3.924926784 -1.264167034 TAVAPS(ph)AVNLADPRTPTAPAVNLAGAR ddPTM_A459_MK2206_30min_R2 1 TAVAPSAVNLADPRTPTAPAVNLAGAR 27 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.01)AVAPS(0.873)AVNLADPRT(0.081)PT(0.037)APAVNLAGAR 54.656 0.005609 7542800 10479 12233 9211.5 12089 12456 14054 9615.8 5411.9 10199 9454.7 TRUE FALSE 11281.2803 11625.52701 9518.606812 11101.29003 11966.91485 14588.83482 8353.233909 6119.253912 11086.09058 9146.193913 1.233439877 1.271078125 1.040717801 1.213760624 1.308403798 1.595071672 0.913301641 0.669049221 1.212098791 1 13.15895579 -7.321725722 24.95730332 0.921032662 1.264608218 0.443933628 0.178706653 227.2693988 94083.83914 0.075826487 0.051122217 4.77E-08 7.321725722 0.343575556 TAVAPSAVNLADPRT(ph)PTAPAVNLAGAR ddPTM_A459_MK2206_30min_R1 2 TAVAPSAVNLADPRTPTAPAVNLAGAR 27 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 TAVAPS(0.002)AVNLADPRT(0.731)PT(0.268)APAVNLAGAR;TAVAPS(0.001)AVNLADPRT(0.705)PT(0.294)APAVNLAGAR 95.742 3.51E-06 69768000 4815.4 4516.9 4692.5 4620.1 4848.9 3581.3 3483.7 4344.1 2723.7 2472.9 TRUE FALSE 4405.824943 4222.848989 4373.986174 4975.940903 4655.758045 3784.070111 3251.308729 4306.119992 3006.838362 2779.261521 1.585250222 1.519414044 1.573794384 1.790382396 1.675178104 1.361537978 1.169846272 1.549375602 1.081883924 1 11.44048588 -6.89351891 4.115520304 1.247848168 1.627963631 0.633954477 0.152514685 0.160149906 4.951793785 0.055278754 0.048420237 1.28E-07 6.89351891 0.380115463 TAVAPSAVNLADPRT(ph)PTAPAVNLAGAR ddPTM_A459_MK2206_30min_R2 2 TAVAPSAVNLADPRTPTAPAVNLAGAR 27 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.002)AVAPS(0.04)AVNLADPRT(0.729)PT(0.229)APAVNLAGAR;TAVAPSAVNLADPRT(0.731)PT(0.268)APAVNLAGAR 75.43 0.00019891 22949800 22647.4 33231 24330.6 28265 30906 29264 23208 18486.4 27505.9 22120.4 TRUE FALSE 24381.30236 31580.79686 25141.77006 25955.65908 29692.47515 30377.66203 20160.76172 20902.63595 29898.31346 21398.61316 1.139387033 1.475833813 1.17492521 1.212959872 1.387588762 1.419608916 0.942152726 0.976821993 1.397207998 1 14.38522968 -7.258504432 24.9880142 1.07711418 1.303737202 0.332698813 0.154466311 306.8013392 2612107.647 0.060259509 0.044630207 5.51E-08 7.258504432 0.226623022 TAVIPINGS(ph)PR ddPTM_A459_MK2206_30min_R1 4 TAVIPINGSPR 11 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR 143.76 0.0008131 250366000 18496.9 18039.1 17314.6 15431.8 16361.3 14828.2 17248.4 15413.6 16848.1 15672.4 TRUE FALSE 16923.64152 16864.75131 16139.33319 16620.35991 15709.59478 15667.75987 16097.79071 15278.84052 18599.52029 17614.01523 0.960805433 0.95746206 0.916277917 0.943587234 0.89188039 0.889505298 0.913919427 0.867425191 1.055950051 1 14.1044362 -8.268619182 24.9994858 1.027975036 0.917840705 0.668134413 0.031113162 370.6302456 1290486.359 0.029101738 0.008130534 5.39E-09 8.268619182 -0.110134331 TAVIPINGS(ph)PR ddPTM_A459_MK2206_30min_R2 4 TAVIPINGSPR 11 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR 99.834 0.016863 222092000 382228 406780 347625 412487 389089 415603 424813 346188 348816 365417 TRUE FALSE 411491.6696 386579.8967 359214.644 378785.4926 373811.4108 431419.0634 369034.5428 391435.9602 379155.3852 353493.4732 1.164071477 1.0935984 1.016184657 1.071548759 1.057477547 1.220444212 1.043964233 1.10733575 1.072595151 1 18.43132405 -8.653211237 4.026030721 1.000004498 1.094142977 0.211346612 0.056100099 1.354002045 39.34973419 0.054395061 0.014242042 2.22E-09 8.653211237 0.094138479 TAVPS(ph)PVEAAAASDPAAAR ddPTM_A459_MK2206_30min_R1 4 TAVPSPVEAAAASDPAAAR 19 0 Q147X3;Q147X3-2;J3KNC2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 TAVPS(1)PVEAAAASDPAAAR;T(0.036)AVPS(0.964)PVEAAAASDPAAAR;T(0.002)AVPS(0.998)PVEAAAASDPAAAR;T(0.111)AVPS(0.889)PVEAAAASDPAAAR 209.19 1.81E-16 60560700 22264.7 22420 21383.1 18716.9 22639.1 19749 21905.5 20541.1 20571.2 16594.2 TRUE FALSE 20370.97035 20960.45392 19931.67475 20158.47888 21737.33671 20867.17131 20444.22406 20361.51133 22709.64985 18650.01478 1.092276365 1.123884039 1.06872166 1.08088273 1.165539919 1.118882294 1.096204175 1.091769179 1.217674631 1 14.18688915 TAVPS(ph)PVEAAAASDPAAAR ddPTM_A459_MK2206_30min_R2 1 TAVPSPVEAAAASDPAAAR 19 0 Q147X3;Q147X3-2;J3KNC2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 T(0.17)AVPS(0.829)PVEAAAASDPAAAR 147.84 3.92E-05 16316000 32016 38518 32506 37890 37091 32000 39163 28625 27881 32416 TRUE FALSE 34467.16958 36605.25213 33589.73382 34794.2658 35634.62097 33217.78242 34020.85106 32366.38578 30306.03898 31358.26857 1.099141347 1.167323765 1.071160346 1.109572288 1.136370807 1.059298996 1.084908466 1.03214837 0.966444908 1 14.93655828 -7.727806968 1.139002533 0.980694021 1.114264235 0.740125169 0.02955716 0.245928276 0.579252532 0.024597984 0.009886989 1.87E-08 7.727806968 0.133570214 TAVSVTQGGHS(ph)R ddPTM_A459_MK2206_30min_R1 1 TAVSVTQGGHSR 12 0 P40425 P40425 PBX2 Pre-B-cell leukemia transcription factor 2 1 TAVSVTQGGHS(1)R 81.185 0.038719 2256000 1440.6 995.14 1037.5 922.77 1281.7 1239.9 1484.4 1308.9 753.19 729.71 TRUE FALSE 1318.069405 930.3562051 967.0773906 993.8419053 1230.647175 1310.102066 1385.378384 1297.456425 831.4867958 820.1119838 1.607182228 1.134425814 1.179201633 1.211836828 1.500584309 1.597467288 1.68925514 1.58204788 1.013869828 1 9.679677109 -6.262125396 24.60749099 1.450922183 1.265111925 0.019403616 0.252308085 118.5752784 4253304.225 0.076325355 0.091807733 5.47E-07 6.262125396 -0.185810259 TAVSVTQGGHS(ph)R ddPTM_A459_MK2206_30min_R2 4 TAVSVTQGGHSR 12 0 P40425 P40425 PBX2 Pre-B-cell leukemia transcription factor 2 1 TAVSVT(0.009)QGGHS(0.991)R;TAVSVTQGGHS(1)R;TAVSVTQGGHS(1)R;TAVSVTQGGHS(1)R 131.61 0.0013239 13444400 72800 114307 92092 134416 126641 122532 96348 75682 78502 64843 TRUE FALSE 78373.62397 108630.6806 95162.30132 123433.7828 121668.438 127195.0411 83697.39187 85573.89726 85329.96206 62727.17822 1.249436468 1.731796068 1.517082452 1.967787908 1.939644688 2.027750087 1.334308257 1.364223606 1.360334778 1 15.93680304 -7.382478815 7.041110613 1.287581415 1.747344897 0.490454093 0.236597085 0.247556369 13.26637713 0.104366476 0.069939598 4.14E-08 7.382478815 0.459763482 TCDSITPSKSS(ph)PVPVSDTQK ddPTM_A459_MK2206_30min_R2 2 TCDSITPSKSSPVPVSDTQK 20 1 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 1 TCDSITPSKS(0.039)S(0.74)PVPVS(0.2)DT(0.021)QK;TCDSITPS(0.002)KS(0.098)S(0.818)PVPVS(0.075)DT(0.006)QK 96.561 0.00054369 109376000 132713 156627 134849 152560 177756 128758 195855 127772 130087 150517 TRUE FALSE 142873.6093 148849.1309 139344.7984 140095.36 170776.4063 133657.9759 170139.0032 144472.2391 141401.7321 145605.6426 0.981236762 1.022275842 0.957001362 0.962156119 1.172869425 0.91794503 1.168491826 0.992215937 0.971128107 1 17.15170674 TCDSITPSKSSPVPVS(ph)DTQK ddPTM_A459_MK2206_30min_R1 2 TCDSITPSKSSPVPVSDTQK 20 1 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 1 TCDS(0.002)IT(0.002)PS(0.008)KS(0.236)S(0.236)PVPVS(0.361)DT(0.154)QK;TCDSITPSKS(0.004)S(0.011)PVPVS(0.644)DT(0.341)QK 86.016 0.0012826 23337000 5169.1 4810.1 4949.2 4873.9 4447.2 3565.4 4671.4 4704.3 4203.5 4146.6 TRUE FALSE 4729.440901 4496.961616 4613.262093 5249.288622 4270.058607 3767.269867 4359.779429 4663.170801 4640.468867 4660.312113 1.01483351 0.964948593 0.989904105 1.126381344 0.916260221 0.808372868 0.935512327 1.000613411 0.995742078 1 12.18621086 -4.75863813 23.40771192 0.968445281 1.014833652 0.028458325 0.075909914 174.1189287 1454313.495 0.0207026 0.138081206 1.74E-05 4.75863813 0.046388371 TCEERPAEDGS(ph)DEEDPDSMEAPTR ddPTM_A459_MK2206_30min_R1 3 TCEERPAEDGSDEEDPDSMEAPTR 24 1 D6RGJ8;Q9H6Y2 D6RGJ8 WDR55 WD repeat-containing protein 55 1 T(0.002)CEERPAEDGS(0.987)DEEDPDS(0.011)MEAPTR;T(0.005)CEERPAEDGS(0.971)DEEDPDS(0.021)MEAPT(0.003)R;TCEERPAEDGS(1)DEEDPDSMEAPTR 108.23 2.66E-07 65754200 5234.5 5667.6 5673 4849.3 5716.9 5459.5 5634.7 5670.9 4724.3 3889.7 TRUE FALSE 4789.278288 5298.63821 5287.932566 5222.793926 5489.183767 5768.612172 5258.819444 5621.319919 5215.407891 4371.585402 1.095547232 1.212063296 1.20961438 1.194713919 1.255650585 1.319569822 1.202954755 1.285876725 1.193024363 1 12.09394087 -4.749685116 3.921063201 1.222434723 1.078986704 0.127550324 0.08137845 0.476454524 13.01177872 0.019001469 0.205101525 1.78E-05 4.749685116 -0.143448019 TCEERPAEDGS(ph)DEEDPDSMEAPTR ddPTM_A459_MK2206_30min_R2 5 TCEERPAEDGSDEEDPDSMEAPTR 24 1 D6RGJ8;Q9H6Y2 D6RGJ8 WDR55 WD repeat-containing protein 55 1 TCEERPAEDGS(0.997)DEEDPDS(0.001)MEAPT(0.001)R;T(0.01)CEERPAEDGS(0.97)DEEDPDS(0.015)MEAPT(0.005)R;T(0.024)CEERPAEDGS(0.976)DEEDPDSMEAPTR;T(0.004)CEERPAEDGS(0.996)DEEDPDSMEAPTR;T(0.159)CEERPAEDGS(0.84)DEEDPDS(0.001)MEAPTR 110.16 2.11E-07 499989900 168578 200029 205471 245289 219000 224371 232685 183550 184082 218624 TRUE FALSE 181484.4613 190095.8507 212321.3006 225248.1041 210400.9596 232909.5956 202133.18 207540.6152 200093.1196 211490.3168 0.858121847 0.898839501 1.003929181 1.065051618 0.994849139 1.101277823 0.955756193 0.981324433 0.946110076 1 17.69023208 -5.184919048 3.392014724 1.009201748 0.866434045 0.575550191 0.044336244 0.176264953 3.885096779 0.012110377 0.038393914 6.53E-06 5.184919048 -0.142767703 TCFS(ph)PNRVIGLSSDLQQVGGASAR ddPTM_A459_MK2206_30min_R1 2 TCFSPNRVIGLSSDLQQVGGASAR 24 1 O00303 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F 1 T(0.138)CFS(0.86)PNRVIGLS(0.001)S(0.001)DLQQVGGASAR;T(0.214)CFS(0.783)PNRVIGLS(0.001)S(0.001)DLQQVGGASAR 55.247 0.0085191 77677000 2802.8 2843.7 3132 2939 3055 2062.89 2570.2 3159.3 1933.55 1718.33 TRUE FALSE 2564.407142 2658.574613 2919.408566 3165.362289 2933.312881 2179.689049 2398.746648 3131.678573 2134.549442 1931.209693 1.327876072 1.376636946 1.511699417 1.639056753 1.518899212 1.128665135 1.242095385 1.621614983 1.105291388 1 10.91528911 -6.745854246 24.96947464 1.259794429 1.480549946 0.3391032 0.17362582 329.5933619 528051.6251 0.058649222 0.058454074 1.80E-07 6.745854246 0.220755517 TCFS(ph)PNRVIGLSSDLQQVGGASAR ddPTM_A459_MK2206_30min_R2 1 TCFSPNRVIGLSSDLQQVGGASAR 24 1 O00303 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F 1 T(0.069)CFS(0.931)PNRVIGLSSDLQQVGGASAR 87.05 4.93E-05 13395000 6466.6 21997 9930.5 17700 26413 22045 18479 13153 23799 11948 TRUE FALSE 6961.687868 20904.66097 10261.57791 16253.85338 25375.89291 22883.93792 16052.6851 14872.14226 25868.994 11558.13774 0.602319165 1.808653041 0.887822774 1.406269223 2.19550013 1.979898357 1.388864319 1.286724782 2.238162807 1 13.49662135 -4.753365335 24.91751724 1.585023941 0.602317288 0.300015228 0.446426294 377.4762519 1164843.211 0.11217773 1.216192604 1.76E-05 4.753365335 -0.982706653 TCGVNDDES(ph)PSK ddPTM_A459_MK2206_30min_R1 2 TCGVNDDESPSK 12 0 Q8NG08 Q8NG08 HELB DNA helicase B 1 T(0.003)CGVNDDES(0.519)PS(0.478)K;TCGVNDDES(0.5)PS(0.5)K 159.12 0.00046047 8477500 4200.5 3933.7 4162.1 3320.9 3049.1 3179.4 3681.9 3669.3 4561.9 5919 TRUE FALSE 3843.225417 3677.615415 3879.588248 3576.676293 2927.64789 3359.41488 3436.287169 3637.219697 5036.12583 6652.290406 0.577729651 0.552834466 0.583195864 0.537660877 0.440096224 0.505001236 0.516556999 0.546762014 0.75705141 1 12.69963544 -8.51979437 2.122426055 0.998824775 0.527991297 0.936243025 0.038783162 0.078744627 0.815416414 0.041804434 0.011601175 3.02E-09 8.51979437 -0.470833478 TCGVNDDES(ph)PSK ddPTM_A459_MK2206_30min_R2 1 TCGVNDDESPSK 12 0 Q8NG08 Q8NG08 HELB DNA helicase B 1 TCGVNDDES(0.5)PS(0.5)K 139.77 0.0011302 4716600 57781 35705 35897 33749 37784 24441 46492 35955 25837 50815 TRUE FALSE 62204.75779 33931.94162 37093.78806 30991.59874 36300.41031 25371.11938 40387.54455 40654.44195 28084.25556 49156.91071 1.265432609 0.690278155 0.754599659 0.630462702 0.73845996 0.51612518 0.821604612 0.827034111 0.571318562 1 15.58510663 -4.759757347 24.99388913 0.716810442 1.265433292 0.597103884 0.132221977 27.78570111 412752.3546 0.030758312 0.191111175 1.74E-05 4.759757347 0.548622851 TCGVNDDES(ph)PSKIFMVGESPQVSSR ddPTM_A459_MK2206_30min_R1 2 TCGVNDDESPSKIFMVGESPQVSSR 25 1 Q8NG08 Q8NG08 HELB DNA helicase B 1 TCGVNDDES(0.839)PS(0.16)KIFMVGESPQVSSR;T(0.003)CGVNDDES(0.778)PS(0.218)KIFMVGES(0.001)PQVSSR 75.43 0.00016827 22380000 2382.1 2067.02 2671 2419.45 1856.91 1380.25 1725.34 2300.94 2146.87 1782.45 TRUE FALSE 2179.489886 1932.456622 2489.699962 2605.796458 1782.945343 1458.398562 1610.245717 2280.823124 2370.044819 2003.273363 1.087964292 0.964649487 1.242815887 1.300769284 0.890015999 0.728007764 0.803807282 1.138548122 1.183086075 1 10.96814359 -6.28176078 24.76811064 0.945037937 1.142575891 0.269107708 0.153923036 1098.00807 1338269.495 0.053907526 0.06119731 5.23E-07 6.28176078 0.197537954 TCGVNDDES(ph)PSKIFMVGESPQVSSR ddPTM_A459_MK2206_30min_R2 1 TCGVNDDESPSKIFMVGESPQVSSR 25 1 Q8NG08 Q8NG08 HELB DNA helicase B 1 TCGVNDDES(0.5)PS(0.5)KIFMVGESPQVSSR 74.873 0.00017509 4629300 17834 23135 21283 20388 23545 17844 25161 20488 19867 23566 TRUE FALSE 19199.38475 21986.14954 21992.5646 18722.23518 22620.505 18523.06592 21857.33048 23165.85195 21594.99575 22797.04335 0.842187491 0.964429869 0.964711268 0.821257165 0.992256086 0.812520538 0.958779178 1.016177914 0.947271776 1 14.47655911 -7.511043008 24.66901555 0.986530632 0.904418388 0.306138698 0.060652619 607.9627165 1267175.232 0.025363229 0.016026461 3.08E-08 7.511043008 -0.082112244 TCGVNDDESPS(ph)K ddPTM_A459_MK2206_30min_R2 3 TCGVNDDESPSK 12 0 Q8NG08 Q8NG08 HELB DNA helicase B 1 TCGVNDDES(0.202)PS(0.798)K;TCGVNDDES(0.147)PS(0.853)K;TCGVNDDES(0.098)PS(0.902)K 159.18 0.0003536 3407800 177900 124102 136210 117225 134753 111337 188368 140816 104611 196230 TRUE FALSE 191520.1608 117939.2751 140751.1734 107647.3425 129461.9201 115574.0076 163635.0553 159221.1347 113709.8757 189827.0312 1.008919328 0.621298634 0.741470656 0.56708121 0.681999394 0.608838514 0.862021886 0.838769556 0.599018354 1 17.53432592 -11.29892726 9.590099549 1.001986472 0.720874484 0.273438937 0.134050677 0.005608827 0.000130979 0.127864475 0.030851784 5.02E-12 11.29892726 -0.281111989 TCLS(ph)PGSSEMSLQPDLVR ddPTM_A459_MK2206_30min_R2 1 TCLSPGSSEMSLQPDLVR 18 0 Q6UB98-2;Q6UB98 Q6UB98-2 ANKRD12 Ankyrin repeat domain-containing protein 12 1 T(0.002)CLS(0.896)PGS(0.076)S(0.021)EMS(0.006)LQPDLVR 106.79 0.0016362 2492600 6741.9 7551.5 8202.1 8386.6 6191.4 7105.7 6875.6 7308.7 5657.3 6991.3 TRUE FALSE 7258.065048 7176.503491 8475.55392 7701.387953 5948.294527 7376.112393 5972.825461 8263.972185 6149.361728 6763.174454 1.073174306 1.06111465 1.253191675 1.138723835 0.879512212 1.090628734 0.883139346 1.221907292 0.90924192 1 12.72348485 -6.186369576 24.99255325 1.007447585 1.135208929 0.265426052 0.108490758 186.9489779 62238.92992 0.030803682 0.039767382 6.51E-07 6.186369576 0.127761343 TCNS(ph)PQNSTDSVSDIVPDSPFPGALGSDTR ddPTM_A459_MK2206_30min_R1 4 TCNSPQNSTDSVSDIVPDSPFPGALGSDTR 30 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 T(0.056)CNS(0.943)PQNSTDSVSDIVPDSPFPGALGSDTR;T(0.077)CNS(0.923)PQNS(0.001)TDSVSDIVPDSPFPGALGSDTR;T(0.086)CNS(0.889)PQNS(0.024)T(0.001)DSVSDIVPDSPFPGALGSDTR;T(0.086)CNS(0.913)PQNS(0.001)TDSVSDIVPDSPFPGALGSDTR 207.01 5.38E-54 105614000 7260.3 6867.9 6746.1 5801.2 7045.4 6085.9 6777.3 6629.7 6085.3 5337.6 TRUE FALSE 6642.77336 6420.798462 6288.193528 6248.009429 6764.766799 6430.478399 6325.198683 6571.737232 6717.888711 5998.862185 1.107338884 1.070336051 1.048231037 1.041532417 1.127674981 1.07194968 1.054399732 1.095497284 1.119860484 1 12.55047317 -4.758944061 24.22277652 1.072741565 1.107338949 0.083950264 0.03600645 131.7971967 1278986.785 0.008759344 0.057889835 1.74E-05 4.758944061 0.034597384 TCNS(ph)PQNSTDSVSDIVPDSPFPGALGSDTR ddPTM_A459_MK2206_30min_R2 4 TCNSPQNSTDSVSDIVPDSPFPGALGSDTR 30 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 T(0.121)CNS(0.856)PQNS(0.015)T(0.008)DSVSDIVPDSPFPGALGSDTR;T(0.269)CNS(0.691)PQNS(0.03)T(0.008)DS(0.003)VSDIVPDSPFPGALGSDTR;T(0.234)CNS(0.765)PQNSTDSVSDIVPDSPFPGALGSDTR;T(0.225)CNS(0.775)PQNSTDSVSDIVPDSPFPGALGSDTR 163.56 1.46E-23 11023500 29993.7 27645.8 32845.6 36262.5 37518.6 29477.7 32850.9 27589.7 34604.7 30795 TRUE FALSE 32290.04073 26272.94977 33940.65591 33299.73775 36045.43125 30599.49453 28537.53737 31195.76852 37614.55426 29790.16167 1.083916264 0.881933776 1.139324327 1.117809904 1.209977698 1.02716779 0.957951745 1.047183592 1.262650222 1 14.86254833 -5.280807314 24.84044726 1.094510235 0.982924988 0.169491847 0.099452835 1177.7394 1510514.544 0.026507721 0.055307687 5.24E-06 5.280807314 -0.111585247 TCNSPQNS(ph)TDSVSDIVPDSPFPGALGSDTR ddPTM_A459_MK2206_30min_R2 1 TCNSPQNSTDSVSDIVPDSPFPGALGSDTR 30 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 T(0.087)CNS(0.104)PQNS(0.729)T(0.079)DS(0.002)VSDIVPDSPFPGALGSDTR 118.5 7.24E-16 4970900 2695.8 5831.5 7823.9 6639.8 8457.2 3118.5 5754.6 2867.4 5316.6 9414.5 TRUE FALSE 2902.192521 5541.91619 8084.744921 6097.3071 8125.127834 3237.176703 4999.014107 3242.179025 5779.028258 9107.305636 0.318666424 0.608513254 0.88772083 0.669496264 0.892154953 0.355448344 0.548901542 0.355997608 0.634548624 1 13.15280859 -8.565170761 21.49189697 1.000000003 0.589483733 0.296175227 0.192768417 5399.352108 2743831.273 0.195059657 0.050364187 2.72E-09 8.565170761 -0.41051627 TCNVLVALEQQS(ph)PDIAQGVHLDR ddPTM_A459_MK2206_30min_R1 2 TCNVLVALEQQSPDIAQGVHLDR 23 0 P31153;P31153-2 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 1 TCNVLVALEQQS(1)PDIAQGVHLDR;TCNVLVALEQQS(1)PDIAQGVHLDR 166.22 2.50E-12 13603800 2769.7 3002.8 3206.7 2152.3 2790.2 2402 3198 2449.9 3190.3 3434.6 TRUE FALSE 2534.122471 2807.317174 2989.038138 2318.070519 2679.060426 2537.999164 2984.667255 2428.480783 3521.943102 3860.104178 0.656490694 0.727264614 0.774341313 0.600520196 0.694038374 0.657494992 0.773208991 0.62912312 0.912395868 1 11.91442407 -8.408229712 4.085062046 0.996700047 0.692552183 0.794174545 0.055070171 0.088877324 2.366556007 0.051316774 0.013490918 3.91E-09 8.408229712 -0.304147864 TCNVLVALEQQS(ph)PDIAQGVHLDR ddPTM_A459_MK2206_30min_R2 3 TCNVLVALEQQSPDIAQGVHLDR 23 0 P31153;P31153-2 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 1 TCNVLVALEQQS(1)PDIAQGVHLDR;TCNVLVALEQQS(1)PDIAQGVHLDR;TCNVLVALEQQS(1)PDIAQGVHLDR 97.877 4.17E-05 8983400 34883.7 42211 41639 42630 41175 39757 44419 38473.8 35433 41783 TRUE FALSE 37554.42289 40114.86312 43027.22348 39146.99263 39558.26261 41269.98049 38586.73194 43502.45776 38514.89829 40419.62413 0.92911361 0.992460073 1.064513201 0.968514514 0.978689522 1.021038206 0.954653408 1.076270715 0.952876211 1 15.30276829 -4.781066911 4.790964593 1.003297552 0.925077221 0.22543863 0.040179971 0.238707841 12.95731093 0.009443512 0.06067531 1.66E-05 4.781066911 -0.078220331 TCPSLS(ph)PTSPLNNK ddPTM_A459_MK2206_30min_R1 1 TCPSLSPTSPLNNK 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 T(0.003)CPS(0.036)LS(0.906)PT(0.04)S(0.015)PLNNK 191.19 0.00010534 12978000 1459.9 1907.3 1966.5 1825.1 1880 1889.6 1717.9 1676.1 1827.1 1374.1 TRUE FALSE 1335.727839 1783.134423 1833.019459 1965.669518 1805.115619 1996.587519 1603.302025 1661.446034 2017.033583 1544.333882 0.864921669 1.154630125 1.186932101 1.272826777 1.168863573 1.29284706 1.038183546 1.075833441 1.306086467 1 10.59276898 -4.76137241 5.04139872 1.173902735 0.845530159 0.449504843 0.099941056 0.154381692 10.48293694 0.024338913 0.179955893 1.73E-05 4.76137241 -0.328372576 TCPSLS(ph)PTSPLNNK ddPTM_A459_MK2206_30min_R2 4 TCPSLSPTSPLNNK 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 TCPS(0.001)LS(0.632)PT(0.321)S(0.047)PLNNK;TCPS(0.003)LS(0.548)PT(0.367)S(0.083)PLNNK;TCPSLS(0.676)PT(0.162)S(0.162)PLNNK;T(0.001)CPS(0.12)LS(0.823)PT(0.051)S(0.006)PLNNK 196.97 0.00011051 45095400 218910 261398 246572 271550 252287 244836 293571 212415 226547 286978 TRUE FALSE 235669.9179 248417.3554 254792.5874 249363.4964 242380.9447 254153.4055 255024.7751 240178.3698 246251.6486 277613.9314 0.848912433 0.894830293 0.917794673 0.89823841 0.873086389 0.91549226 0.918631042 0.865152439 0.887029146 1 18.08272044 -11.43846376 2.609502913 1.064806606 0.892374316 0.683546137 0.022228428 17669755.55 10560007.06 7013385.157 0.005622189 3.64E-12 11.43846376 -0.17243229 TCPSLSPT(ph)SPLNNK ddPTM_A459_MK2206_30min_R1 1 TCPSLSPTSPLNNK 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 TCPS(0.001)LS(0.016)PT(0.634)S(0.349)PLNNK 206.45 1.77E-05 10508000 2372.2 2536.9 2440.6 2037.8 2324.7 2344.5 2197.5 2276.8 2067 1837.7 TRUE FALSE 2170.431933 2371.747349 2274.938872 2194.751709 2232.102276 2477.243564 2050.908785 2256.894178 2281.872047 2065.36815 1.050869276 1.148341204 1.101468942 1.062644308 1.080728526 1.199419854 0.992999134 1.092732149 1.104825814 1 11.01218325 -14.52287875 0.259498541 0.396392895 1.10098282 0.217858744 0.052451462 299.5351884 2.940053751 96.30019664 0.068496539 3.00E-15 14.52287875 0.704589925 TCPSLSPT(ph)SPLNNK ddPTM_A459_MK2206_30min_R2 2 TCPSLSPTSPLNNK 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 TCPS(0.006)LS(0.238)PT(0.378)S(0.378)PLNNK;TCPS(0.007)LS(0.046)PT(0.754)S(0.193)PLNNK 150.09 0.00099997 23267800 70592 103964 89820 108088 108300 101807 102121 81166 81005 112297 TRUE FALSE 75996.5778 98801.29894 92814.55397 99256.86464 104047.5978 105681.3367 88712.39003 91774.67488 88050.66848 108632.7581 0.699573307 0.909498209 0.854388267 0.91369184 0.957792103 0.972831203 0.816626509 0.844815841 0.810535146 1 16.72909969 -4.758618033 24.98720623 0.893771356 0.699573044 0.47384809 0.062534046 73.54107181 651192.8321 0.016119217 0.109044463 1.74E-05 4.758618033 -0.194198312 TCPSLSPTS(ph)PLNNK ddPTM_A459_MK2206_30min_R1 1 TCPSLSPTSPLNNK 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 TCPSLS(0.002)PT(0.122)S(0.875)PLNNK 238.03 2.12E-19 11730000 3465.3 4058.6 4267.7 3006.6 3474.6 2890.7 3689.5 3220.5 3479.5 2596.6 TRUE FALSE 3170.558038 3794.384402 3978.020414 3238.168853 3336.199324 3054.368936 3443.380187 3192.343508 3841.206477 2918.286411 1.086445123 1.300209735 1.363135708 1.109613107 1.1432049 1.046630969 1.179932228 1.093910281 1.316254108 1 11.51090577 -5.791663224 24.99939188 1.13051309 1.254958264 0.230810038 0.102516478 278.3978512 230273.3479 0.028140817 0.041745545 1.62E-06 5.791663224 0.124445173 TCPSLSPTS(ph)PLNNK ddPTM_A459_MK2206_30min_R2 2 TCPSLSPTSPLNNK 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 TCPSLS(0.063)PT(0.142)S(0.794)PLNNK;TCPSLS(0.004)PT(0.046)S(0.95)PLNNK 212.43 2.79E-06 26851900 141721 157501 148197 152498 143049 126530 156612 130372 129555 151479 TRUE FALSE 152571.2687 149679.7294 153137.814 140038.4256 137432.1775 131345.1878 136048.6563 147412.068 140823.4597 146536.2526 1.041184458 1.021451871 1.045050704 0.955657205 0.937871517 0.896332378 0.928430022 1.005976783 0.961014474 1 17.1608981 -5.768882213 21.55487659 0.951018989 1.034451323 0.58786172 0.030889048 21.42223688 62041.87408 0.009308558 0.014187825 1.70E-06 5.768882213 0.083432334 TCS(ph)FGGFDLTNR ddPTM_A459_MK2206_30min_R1 1 TCSFGGFDLTNR 12 0 O94885;A0A1B0GWB9 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 T(0.017)CS(0.983)FGGFDLTNR 158.86 0.00045796 15244000 1952.9 2162.7 2282.1 1921.2 1905.9 1727.2 2167.2 1907.3 2148.8 1914.7 TRUE FALSE 1786.7956 2021.907837 2127.19741 2069.171157 1829.983967 1824.992571 2022.630042 1890.624677 2372.17545 2151.907491 0.830331047 0.939588642 0.988517127 0.961552095 0.850400853 0.848081332 0.939924253 0.878580833 1.102359399 1 11.07140034 -8.256110574 24.99925556 1.051179704 0.907966426 0.529886141 0.055145826 330.0152363 1548233.629 0.041446588 0.014610934 5.54E-09 8.256110574 -0.143213278 TCS(ph)FGGFDLTNR ddPTM_A459_MK2206_30min_R2 2 TCSFGGFDLTNR 12 0 O94885;A0A1B0GWB9 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 T(0.003)CS(0.997)FGGFDLTNR;T(0.031)CS(0.969)FGGFDLTNR 122.52 0.0035218 14911000 39670 42436 45717 43684 43488 37368 45079 31358 33188 39749 TRUE FALSE 42707.1657 40328.68995 47241.18196 40114.87746 41780.44261 38790.06543 39160.07315 35456.59827 36074.63225 38451.99339 1.110661943 1.048806223 1.228575629 1.043245718 1.086561162 1.008792055 1.018414644 0.922100394 0.938173267 1 15.23077077 -6.916068815 1.104515278 0.951977054 1.115379595 0.6071711 0.052481961 0.324780098 0.827379306 0.029890122 0.023227408 1.21E-07 6.916068815 0.16340254 TCS(ph)LPDLSK ddPTM_A459_MK2206_30min_R1 1 TCSLPDLSK 9 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 T(0.038)CS(0.754)LPDLS(0.208)K 121.29 0.0063098 17154000 8051.2 8341.2 7979.1 7012.8 6683.7 5792.7 6198.3 6111.4 6654.9 5589.7 TRUE FALSE 7366.403161 7798.186364 7437.500923 7552.927071 6417.474076 6120.677668 5784.822716 6057.968674 7346.70067 6282.194236 1.172584432 1.241315704 1.183901778 1.202275318 1.021533852 0.974289784 0.920828376 0.964307764 1.169448189 1 12.61705283 -6.289192159 4.416132393 0.998467245 1.203171732 0.687779498 0.063168056 0.118840283 5.701478921 0.020260194 0.024083521 5.14E-07 6.289192159 0.204704487 TCSDGGPSSELAHS(ph)PT(ph)NSGKK ddPTM_A459_MK2206_30min_R2 1 TCSDGGPSSELAHSPTNSGKK 21 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 2 TCSDGGPS(0.008)S(0.009)ELAHS(0.99)PT(0.532)NS(0.461)GKK 83.064 0.007364 0 10395 12104 8645.9 10805 10111 8399.3 12577 9298.5 9280.2 10346 TRUE FALSE 11190.84919 11502.93296 8934.149991 9922.196937 9713.991336 8718.941247 10925.62479 10513.84588 10087.37502 10008.41087 1.118144463 1.149326613 0.892664191 0.991385852 0.970582789 0.871161402 1.091644312 1.050501025 1.007889779 1 13.2889253 -3.022359816 6.656407368 1.012421318 1.106060187 0 0.086203654 0 0 0.02071251 0 0.000949818 3.022359816 0.093638868 TCSDGGPSSELAHS(ph)PTNSGK ddPTM_A459_MK2206_30min_R1 1 TCSDGGPSSELAHSPTNSGK 20 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 TCSDGGPSSELAHS(0.957)PT(0.041)NS(0.002)GK 111.97 0.00058369 0 1354.4 982.17 1039 777.24 1292.8 1283.4 1244.3 1019.5 722.28 752.44 TRUE FALSE 1239.201168 918.2305545 968.4755748 837.1031595 1241.305038 1356.064999 1161.295017 1010.586619 797.3635907 845.6579478 1.465369268 1.085817921 1.14523322 0.989883867 1.467857118 1.603562058 1.373244372 1.195030002 0.942891381 1 9.723930429 -8.122216764 3.740109348 0.973366095 1.295213461 0.347497001 0.179560824 0.315218922 7.51668901 0.154058776 0.052346146 7.55E-09 8.122216764 0.321847366 TCSDGGPSSELAHS(ph)PTNSGK ddPTM_A459_MK2206_30min_R2 4 TCSDGGPSSELAHSPTNSGK 20 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 TCSDGGPSSELAHS(0.998)PT(0.002)NSGK;TCSDGGPSSELAHS(0.493)PT(0.481)NS(0.025)GK;TCSDGGPSSELAHS(0.669)PT(0.296)NS(0.035)GK;TCSDGGPSSELAHS(0.984)PT(0.015)NS(0.001)GK 119.76 0.00016753 109207000 98291 163090 133927 185618 158549 150193 157092 129452 145749 132536 TRUE FALSE 105816.2345 154991.1878 138392.0593 170452.4156 152323.5696 155908.6999 136465.6317 146371.8209 158425.9846 128211.3612 0.825326504 1.208872493 1.079405585 1.329464207 1.188066083 1.216028739 1.06438018 1.141644699 1.235662605 1 16.96816458 -4.75739554 24.99865233 1.169048864 0.825326006 0.552444335 0.090909372 86.3280945 533600.2973 0.021737928 0.161789929 1.75E-05 4.75739554 -0.343722858 TCSDGGPSSELAHSPT(ph)NSGKK ddPTM_A459_MK2206_30min_R2 2 TCSDGGPSSELAHSPTNSGKK 21 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 TCSDGGPSSELAHS(0.027)PT(0.666)NS(0.307)GKK;TCSDGGPSSELAHS(0.092)PT(0.575)NS(0.333)GKK 76.526 0.0015533 13470800 21780.6 53733 41227 56195 60428 46701 50276 39494 53783 41131 TRUE FALSE 23448.13948 51064.69736 42601.4876 51603.68874 58055.29309 48478.23928 43674.70081 44656.0014 58460.94812 39788.89884 0.589313607 1.283390565 1.070687776 1.29693684 1.459082679 1.21838605 1.097660455 1.122323128 1.46927786 1 15.28007835 -4.758459749 24.9974748 1.228697307 0.589312737 0.617636367 0.149822023 54.85581416 460128.3861 0.036977511 0.253139724 1.74E-05 4.758459749 -0.63938457 TDAEAT(ph)DTEATET ddPTM_A459_MK2206_30min_R1 1 TDAEATDTEATET 13 0 Q9Y3D3 Q9Y3D3 MRPS16 "28S ribosomal protein S16, mitochondrial" 1 TDAEAT(0.979)DT(0.021)EATET 130.1 0.0038799 3828300 1717.2 1547.2 1510.8 1593.8 1499.6 1812.7 1502.3 1560.1 1190.8 1277.7 TRUE FALSE 1571.143123 1446.476999 1408.251105 1716.554752 1439.867757 1915.333507 1402.084308 1546.46021 1314.587921 1435.991122 1.094117574 1.007302188 0.98068232 1.19537978 1.002699623 1.333805953 0.976387867 1.07692881 0.915456858 1 10.48783111 TDAEAT(ph)DTEATET ddPTM_A459_MK2206_30min_R2 1 TDAEATDTEATET 13 0 Q9Y3D3 Q9Y3D3 MRPS16 "28S ribosomal protein S16, mitochondrial" 1 TDAEAT(0.998)DT(0.002)EATET 138.63 0.0026277 0 12299 17415 15613 17725 11553 17955 16415 10409 21371 17645 TRUE FALSE 13240.6209 16550.19642 16133.52963 16276.8108 11099.37117 18638.29011 14259.69078 11769.49204 23229.81095 17069.2451 0.775700438 0.969591586 0.945181204 0.953575317 0.650255539 1.091922344 0.835402544 0.689514502 1.360916128 1 14.05911163 -8.261741056 24.99999997 1.180458055 0.872645299 0.411745575 0.151063511 25.93085073 2148368.284 0.114029754 0.036436237 5.47E-09 8.261741056 -0.307812755 TDALTSS(ph)PGR ddPTM_A459_MK2206_30min_R1 2 TDALTSSPGR 10 0 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 TDALT(0.002)S(0.057)S(0.94)PGR;TDALTS(0.002)S(0.998)PGR 138.25 0.0016578 40994000 13179.6 13242.1 12405.8 11057.5 10123.4 11655.1 14799.8 9419.5 14482 17555.5 TRUE FALSE 12058.60581 12380.03688 11563.72886 11909.15057 9720.163541 12315.00169 13812.53235 9337.146305 15987.45572 19730.40788 0.611168603 0.627459755 0.58608666 0.603593734 0.49264889 0.624163563 0.700063193 0.473236355 0.810295247 1 14.26813316 -8.507514177 4.509690931 0.999366457 0.593941016 0.81865121 0.062521071 0.062451729 3.801095198 0.058741703 0.015328788 3.11E-09 8.507514177 -0.405425441 TDALTSS(ph)PGR ddPTM_A459_MK2206_30min_R2 4 TDALTSSPGR 10 0 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 TDALTS(0.004)S(0.996)PGR;TDALTS(0.03)S(0.97)PGR;TDALT(0.002)S(0.025)S(0.972)PGR;TDALT(0.013)S(0.104)S(0.883)PGR 136.5 0.0018488 276631000 3255130 2718390 2449280 2758040 2242690 2173820 2881390 2150520 1915410 3169030 TRUE FALSE 3504345.256 2583398.706 2530937.773 2532699.309 2154630.722 2256546.243 2503060.032 2431600.348 2082008.9 3065624.811 1.143109634 0.842698916 0.825586277 0.826160886 0.702835753 0.73608037 0.816492619 0.793182629 0.679146676 1 21.54774971 TDANESSSS(ph)PEIR ddPTM_A459_MK2206_30min_R1 1 TDANESSSSPEIR 13 0 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 TDANES(0.006)S(0.003)S(0.017)S(0.973)PEIR 144.8 0.00064995 5595800 2360.8 2598.3 2105 1826.6 2368.2 1870.6 2478.6 2000.6 1928.2 1892.7 TRUE FALSE 2160.001563 2429.150198 1962.118465 1967.285048 2273.869579 1976.511755 2313.257116 1983.108965 2128.64329 2127.181965 1.015428674 1.141956935 0.922402736 0.924831576 1.068958658 0.929169102 1.087474957 0.932270486 1.000686977 1 11.05472774 -5.262203738 24.99998129 0.983574581 1.078692802 0.269934819 0.062799575 80.82115089 2643563.06 0.015521478 0.035671777 5.47E-06 5.262203738 0.095118221 TDANESSSS(ph)PEIR ddPTM_A459_MK2206_30min_R2 2 TDANESSSSPEIR 13 0 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 TDANES(0.001)SS(0.002)S(0.997)PEIR;TDANES(0.006)S(0.003)S(0.023)S(0.968)PEIR 154.72 0.00037715 10972400 80328 103819 96581 111525 90047 90077 103048 80846 93649 92623 TRUE FALSE 86477.97344 98663.49943 99800.96234 102413.0507 86511.30233 93504.94335 89517.67382 91412.84979 101794.4207 89600.7191 0.965148208 1.10114629 1.113841087 1.142993625 0.965520179 1.043573582 0.999073163 1.020224511 1.136089328 1 16.45122269 -6.25904881 24.99485354 1.027815678 1.084598211 0.15725185 0.060263596 400.5051588 4187522.107 0.018280524 0.022460799 5.51E-07 6.25904881 0.056782533 TDASS(ph)ASSFLDSDELER ddPTM_A459_MK2206_30min_R1 1 TDASSASSFLDSDELER 17 0 G3XAC6;Q14498-2;Q14498;H0Y4X3;Q14498-3;A0A0U1RQH7;A0A0U1RQW2 G3XAC6 RBM39 RNA-binding protein 39 1 TDAS(0.022)S(0.569)AS(0.302)S(0.021)FLDS(0.085)DELER 82.59 0.036422 0 161.33 133.19 195.89 225.88 245.31 153.02 347.99 185.47 271.9 197.14 TRUE FALSE 147.6080363 124.5193068 182.5935326 243.2773167 235.5387832 161.6838602 324.776222 183.8484553 300.164978 221.5631915 0.666211907 0.56200358 0.824114923 1.098004208 1.063077227 0.72974152 1.465840151 0.829778873 1.354760129 1 7.791574415 -5.552905241 3.033315448 1.071659764 0.617291 0.452735711 0.206094152 0.216882392 4.058053997 0.054527755 0.113110167 2.80E-06 5.552905241 -0.454368764 TDASSASS(ph)FLDSDELER ddPTM_A459_MK2206_30min_R1 2 TDASSASSFLDSDELER 17 0 G3XAC6;Q14498-2;Q14498;H0Y4X3;Q14498-3;A0A0U1RQH7;A0A0U1RQW2 G3XAC6 RBM39 RNA-binding protein 39 1 TDASSAS(0.035)S(0.965)FLDSDELER;TDASSAS(0.014)S(0.985)FLDS(0.001)DELER 333.07 6.19E-136 12455500 2324.5 2276.3 2255.4 2006.99 2450 2062.68 2497.4 2463.3 2037.74 1810.95 TRUE FALSE 2126.789069 2128.112456 2102.309732 2161.568718 2352.411312 2179.467159 2330.803003 2441.763628 2249.570365 2035.304158 1.044949012 1.045599228 1.032921651 1.062037194 1.155803324 1.070831183 1.145186577 1.199704535 1.105274785 1 10.99102869 -6.096635916 5.184613363 1.122061541 1.042355271 0.287751396 0.050644128 0.250794028 10.49468936 0.014648605 0.01926326 8.01E-07 6.096635916 -0.07970627 TDASSASS(ph)FLDSDELER ddPTM_A459_MK2206_30min_R2 1 TDASSASSFLDSDELER 17 0 G3XAC6;Q14498-2;Q14498;H0Y4X3;Q14498-3;A0A0U1RQH7;A0A0U1RQW2 G3XAC6 RBM39 RNA-binding protein 39 1 TDASSAS(0.004)S(0.996)FLDSDELER 262.73 1.99E-40 2471400 14676 14448 12473 12233 16083 15997 16398 11882 12547 13800 TRUE FALSE 15799.60584 13730.53333 12888.84359 11233.52477 15451.50061 16605.77704 14244.9229 13435.0182 13638.31538 13349.70713 1.183517038 1.028526933 0.96547763 0.84148099 1.157441168 1.243905719 1.067058832 1.006390482 1.02161907 1 13.70452047 -4.758608346 24.39330637 1.039920532 1.183517305 0.155990238 0.102107892 128.0514477 1103052.831 0.028135152 0.189301535 1.74E-05 4.758608346 0.143596773 TDASSASSFLDSDELER ddPTM_A459_MK2206_30min_R2 1 TDASSASSFLDSDELER 17 0 G3XAC6;Q14498-2;Q14498;H0Y4X3;Q14498-3;A0A0U1RQH7;A0A0U1RQW2 G3XAC6 RBM39 RNA-binding protein 39 0 225.32 3.42E-50 0 3395 3866.6 2510.8 4028.3 4579.5 2873.6 3628.4 2644.9 3061.1 2695.7 FALSE TRUE 3654.92381 3674.590267 2594.508819 3699.175004 4399.68582 2982.956862 3151.986722 2990.597511 3327.348945 2607.73953 1.401567821 1.409109393 0.994926368 1.418536998 1.6871646 1.143886047 1.208704583 1.146816036 1.275951416 1 11.34858406 -8.337230492 0.54216249 1.01049375 1.352515098 0.245888604 0.177154959 1.373469334 0.99960115 0.200491611 0.099420754 4.60E-09 8.337230492 0.342021349 TDATDGKDYNASAS(ph)TISPPSSMEEDKFSR ddPTM_A459_MK2206_30min_R2 2 TDATDGKDYNASASTISPPSSMEEDKFSR 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDATDGKDY(0.001)NAS(0.048)AS(0.516)T(0.381)IS(0.045)PPS(0.002)S(0.001)MEEDKFS(0.004)R;TDATDGKDY(0.006)NAS(0.094)AS(0.298)T(0.298)IS(0.298)PPS(0.002)S(0.002)MEEDKFSR 55.62 0.0077941 66210000 85542 127717 110164 117176 135380 105508 138769 93006 86745 105469 TRUE FALSE 92091.16129 121374.7595 113836.8128 107602.346 130064.301 109523.1809 120548.4636 105162.2035 94289.9233 102027.5552 0.902610683 1.189627246 1.115745767 1.054640051 1.274795821 1.07346668 1.181528494 1.030723547 0.924161352 1 16.63859932 -7.978030875 5.676449247 0.965776814 1.118413453 0.295553738 0.09441366 0.187778687 18.90330144 0.053219189 0.023752745 1.05E-08 7.978030875 0.152636638 TDATDGKDYNASAST(ph)ISPPSSMEEDKFSR ddPTM_A459_MK2206_30min_R1 3 TDATDGKDYNASASTISPPSSMEEDKFSR 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDATDGKDY(0.001)NAS(0.021)AS(0.239)T(0.65)IS(0.086)PPS(0.001)S(0.001)MEEDKFSR;TDATDGKDY(0.001)NAS(0.016)AS(0.132)T(0.404)IS(0.404)PPS(0.027)S(0.013)MEEDKFS(0.001)R;TDATDGKDYNAS(0.006)AS(0.165)T(0.409)IS(0.409)PPS(0.005)S(0.005)MEEDKFSR 68.959 0.00053704 347149000 10305.8 10865.7 11603.3 10077.1 8774.9 8932.2 8918.9 9715.1 8866 7249.6 TRUE FALSE 9429.237592 10158.34096 10815.70032 10853.23999 8425.377152 9437.933445 8323.936454 9630.161905 9787.652427 8147.73518 1.157283268 1.24676867 1.327448682 1.332056056 1.034075969 1.15835054 1.021625798 1.18194341 1.201272772 1 12.99218337 -6.259178667 24.99560302 1.10768626 1.268920528 0.517040571 0.078502148 176.3897916 1950257.128 0.02404398 0.029567516 5.51E-07 6.259178667 0.161234268 TDATDGKDYNASAST(ph)ISPPSSMEEDKFSR ddPTM_A459_MK2206_30min_R2 1 TDATDGKDYNASASTISPPSSMEEDKFSR 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDAT(0.001)DGKDY(0.002)NAS(0.006)AS(0.074)T(0.443)IS(0.443)PPS(0.014)S(0.014)MEEDKFS(0.002)R 42.472 0.029335 15267000 21629 28528 30666 30481 33995 22512 27310 20977 24987 23813 TRUE FALSE 23284.93287 27111.341 31688.38913 27990.6048 32660.18549 23368.70993 23724.16419 23718.76592 27160.32409 23035.98376 1.010806967 1.176912664 1.375603901 1.215081808 1.417789916 1.014443758 1.02987415 1.029639809 1.179039036 1 14.49160159 -6.793605691 24.99975834 1.051156417 1.242010387 0.40917556 0.113312984 205.1645031 159453.1154 0.040910299 0.036082275 1.61E-07 6.793605691 0.19085397 TDATDGKDYNASASTIS(ph)PPSSMEEDK ddPTM_A459_MK2206_30min_R1 1 TDATDGKDYNASASTISPPSSMEEDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDATDGKDYNASAS(0.01)T(0.049)IS(0.94)PPS(0.001)SMEEDK 126.37 3.95E-09 9515000 662.23 933.77 849.52 472.84 448.27 686.31 727.21 608.78 843.5 1058.7 TRUE FALSE 605.903861 872.9814033 791.8569493 509.2582187 430.4144567 725.1682791 678.6991478 603.4575006 931.1848435 1189.859749 0.509222924 0.733684289 0.665504443 0.427998526 0.361735454 0.609456938 0.570402645 0.507166917 0.782600508 1 10.21657581 -8.504659289 3.042159244 0.998693411 0.551074821 0.664848023 0.103053014 0.149566108 3.310235993 0.108293773 0.028891389 3.13E-09 8.504659289 -0.44761859 TDATDGKDYNASASTIS(ph)PPSSMEEDK ddPTM_A459_MK2206_30min_R2 1 TDATDGKDYNASASTISPPSSMEEDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDATDGKDYNASAS(0.012)T(0.004)IS(0.962)PPS(0.015)S(0.006)MEEDK 111.38 9.68E-09 8834700 35695 31330 35617 30164 28726 15396 34339 30245 20555 41784 TRUE FALSE 38427.83664 29774.19776 36804.453 27699.50471 27598.0729 15981.90557 29830.24805 34198.12535 22342.83675 40420.5915 0.950699513 0.73660965 0.91053722 0.685282023 0.682772614 0.395390195 0.737996327 0.846057024 0.552758778 1 15.30280281 -5.775035135 23.80854653 0.681791058 0.853014854 0.176503107 0.160152585 207.3564583 363117.435 0.044316853 0.066196168 1.68E-06 5.775035135 0.171223796 TDATDGKDYNASASTIS(ph)PPSSMEEDKFSR ddPTM_A459_MK2206_30min_R2 2 TDATDGKDYNASASTISPPSSMEEDKFSR 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDATDGKDY(0.002)NAS(0.011)AS(0.127)T(0.127)IS(0.708)PPS(0.01)S(0.014)MEEDKFSR;TDATDGKDYNAS(0.002)AS(0.026)T(0.026)IS(0.689)PPS(0.198)S(0.06)MEEDKFSR 83.601 1.03E-05 38839000 76765 107268 107738 89774 109997 79486 115823 76267 89657 105593 TRUE FALSE 82642.18742 101941.2271 111329.9311 82439.17703 105677.9651 82510.89543 100615.301 86235.35876 97455.2038 102147.5091 0.809047506 0.997980548 1.089893745 0.807060082 1.034562331 0.807762188 0.985000045 0.844223805 0.954063439 1 16.6402945 -5.769837262 24.99999904 0.915398531 0.968874605 0.043882056 0.098550965 559.3789875 1665241.463 0.026325489 0.039765926 1.70E-06 5.769837262 0.053476074 TDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPS(ph)PEAR ddPTM_A459_MK2206_30min_R1 2 TDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEAR 42 0 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 TDCEPVGLEPAVEQSSAASELAEASSEELAEAPT(0.005)EAPS(0.995)PEAR;TDCEPVGLEPAVEQSSAASELAEASSEELAEAPT(0.001)EAPS(0.999)PEAR 132.51 1.59E-36 19467000 2606.8 2644.7 2597.2 2474.9 2479.4 2358.78 2697.47 2381.3 2290.66 2166.5 TRUE FALSE 2385.077971 2472.529549 2420.9093 2665.517227 2380.640248 2492.332085 2517.526698 2360.480545 2528.782304 2434.902376 0.979537412 1.015453257 0.994253126 1.094712155 0.977714865 1.023586042 1.03393332 0.969435394 1.038555931 1 11.24964822 -4.51045531 1.961223176 1.017429524 0.939360592 0.095311325 0.033854277 5.125457323 10.84541519 0.008713128 0.935747983 3.09E-05 4.51045531 -0.078068932 TDCSSGDASRPSSDNADS(ph)PK ddPTM_A459_MK2206_30min_R1 1 TDCSSGDASRPSSDNADSPK 20 1 Q9NZN5-2;E9PMR6;Q9NZN5 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 TDCSSGDASRPSSDNADS(1)PK 79.025 0.039905 0 1542.8 1938.3 1890 1781 859.77 712.75 1210 1176.6 1691 1488.7 TRUE FALSE 1411.576758 1812.116318 1761.712066 1918.172929 825.5235403 753.1052891 1129.283108 1166.31311 1866.785501 1673.131395 0.843673583 1.083068743 1.052943045 1.146456838 0.493400305 0.450117242 0.674951836 0.697083991 1.115743513 1 10.70833503 -6.250280416 24.97603889 0.705802183 1.036745608 0.323131758 0.204412074 816.318423 1827086.681 0.062596595 0.080057268 5.62E-07 6.250280416 0.330943425 TDDYLDQPCYETINR ddPTM_A459_MK2206_30min_R1 3 TDDYLDQPCYETINR 15 0 P50395-2;P50395;Q5SX87;Q5SX91 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 0 ;; 183.89 0.00029069 12424700 2210.69 2126.59 2003.03 2046.28 2675.4 2468.51 2159.62 2099.39 1813.05 1823.52 FALSE TRUE 2022.659207 1988.148604 1867.069904 2203.88484 2568.833153 2608.274903 2015.55569 2081.035255 2001.523036 2049.431424 0.986936758 0.970097648 0.911018482 1.075364032 1.253436988 1.272682204 0.983470667 1.015420779 0.976623571 1 11.001008 -1.625988915 15.18033439 1.050462339 0.005207614 0 0.116126418 0 0 0.029891228 0 0.023659801 1.625988915 -1.045254724 TDDYLDQPCYETINR ddPTM_A459_MK2206_30min_R2 4 TDDYLDQPCYETINR 15 0 P50395-2;P50395;Q5SX87;Q5SX91 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 0 ;;; 246.63 1.07E-26 22673600 54660 83679 75574 73627 81354 73763 86082 63181 67416 79465 FALSE TRUE 58844.81163 79523.62254 78093.59944 67611.43858 78159.63319 76570.10265 74779.33 71438.97363 73279.72182 76872.06356 0.765490204 1.034493142 1.015890505 0.879531984 1.016749513 0.996071903 0.97277641 0.92932296 0.953268566 1 16.23017178 -4.751317732 24.97404394 0.975145569 0.76548977 0.672414778 0.044378742 256.4524845 632724.5464 0.011227364 0.150140694 1.77E-05 4.751317732 -0.209655799 TDENIDTPGT(ph)PK ddPTM_A459_MK2206_30min_R1 2 TDENIDTPGTPK 12 0 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9;A0A0U1RR74 Q6ULP2-7 AFTPH Aftiphilin 1 TDENIDT(0.03)PGT(0.97)PK;TDENIDT(0.191)PGT(0.809)PK 155.56 0.0015187 4308900 9942.8 11224.8 10107.9 8478.2 6543 5230.6 6308.3 7138.9 7264.5 6600.1 TRUE FALSE 9097.112648 10494.06348 9421.80391 9131.192433 6282.378455 5526.752052 5887.484817 7076.48535 8019.670771 7417.770216 1.226394507 1.414719407 1.270166591 1.230988851 0.846936245 0.745069191 0.79370008 0.953990909 1.081143057 1 12.85676986 -6.177365749 4.078203123 0.887477048 1.305394763 0.767645985 0.103109858 0.113207649 3.492160852 0.033837709 0.044174403 6.65E-07 6.177365749 0.417917715 TDENIDTPGT(ph)PK ddPTM_A459_MK2206_30min_R2 1 TDENIDTPGTPK 12 0 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9;A0A0U1RR74 Q6ULP2-7 AFTPH Aftiphilin 1 TDENIDT(0.045)PGT(0.955)PK 111.83 0.012829 0 92705 89524 75105 74671 64383 57479 80311 61911 52852 66184 TRUE FALSE 99802.56608 85078.36834 77608.96321 68570.14044 61854.99992 59666.40362 69766.06923 70002.98027 57448.97143 64024.4215 1.558820271 1.328842438 1.2121775 1.070999766 0.966115718 0.931931944 1.089679026 1.093379349 0.897297782 1 15.96633469 -5.030068553 0.989767373 0.999678895 1.707477672 0.894951381 0.062469833 0.431908312 0.445361198 0.022661685 0.298855913 9.33E-06 5.030068553 0.707798777 TDEQALLS(ph)SILAK ddPTM_A459_MK2206_30min_R2 1 TDEQALLSSILAK 13 0 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 TDEQALLS(0.669)S(0.331)ILAK 101.72 0.0098836 1750500 26399 16968 21870 14331 20068 15267 21904 9567.2 17090 22202 TRUE FALSE 28420.12774 16125.39379 22599.13488 13160.11146 19280.02949 15847.99638 19027.97849 10817.66589 18576.45731 21477.55056 1.323248089 0.750802274 1.05222124 0.612738004 0.897682882 0.737886583 0.885947326 0.503673166 0.86492439 1 14.39054185 -2.858058634 1.547785072 0.791788345 199.9999708 0.453408931 0.163341365 445.4249067 3.689100262 0.042343327 312698.5253 0.001386569 2.858058634 199.2081824 TDEQALLSS(ph)ILAK ddPTM_A459_MK2206_30min_R1 2 TDEQALLSSILAK 13 0 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 TDEQALLS(0.027)S(0.973)ILAK;TDEQALLS(0.009)S(0.991)ILAK 180.27 1.40E-10 7019100 7004.7 5724.8 4506 5964.1 7326.2 4026.8 7576.9 6894.3 7563.2 6476.7 TRUE FALSE 6408.913482 5352.114479 4200.145274 6423.456015 7034.381941 4254.793936 7071.458826 6834.023862 8349.421705 7279.082493 0.880456223 0.735273228 0.577015754 0.882454076 0.96638305 0.584523385 0.971476671 0.938857867 1.147043149 1 12.8295409 -7.44886398 8.311615979 1.01720829 0.774284758 0.474387312 0.126345584 0.318552408 33.14625463 0.054262058 0.036405437 3.56E-08 7.44886398 -0.242923532 TDEQALLSS(ph)ILAK ddPTM_A459_MK2206_30min_R2 1 TDEQALLSSILAK 13 0 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 TDEQALLS(0.016)S(0.984)ILAK 196.18 0.00019385 1755800 28059 19594 18220 14853 20932 20793 21224 10545 19695 23985 TRUE FALSE 30207.21861 18620.99045 18827.44571 13639.46239 20110.10451 21584.29219 18437.26331 11923.26771 21408.0355 23202.37141 1.30190221 0.802546866 0.811444889 0.587847774 0.866726256 0.930262334 0.794628401 0.513881426 0.92266584 1 14.50198464 -4.761021114 6.147380162 0.786217987 1.319642561 0.518221615 0.143449314 0.101546782 15.66012971 0.035154504 0.227815986 1.73E-05 4.761021114 0.533424575 TDES(ph)SPVLSPR ddPTM_A459_MK2206_30min_R1 2 TDESSPVLSPR 11 0 Q8NA72-3;Q8NA72 Q8NA72-3 POC5 Centrosomal protein POC5 1 T(0.001)DES(0.756)S(0.243)PVLSPR;T(0.001)DES(0.873)S(0.125)PVLSPR 167.84 0.00051349 5765500 2690.67 2907.29 3200.8 3100.52 3694.2 3242.3 3768.2 3307.1 3072.19 2708.8 TRUE FALSE 2461.814387 2718.024893 2983.538614 3339.322588 3547.052191 3425.876224 3516.830253 3278.186373 3391.555144 3044.386594 0.808640529 0.892798864 0.980013057 1.096878627 1.165112275 1.125309194 1.155185173 1.076797007 1.114035632 1 11.57193586 -5.397511093 1.609947034 1.115609078 0.817381928 0.835813188 0.045599073 0.157601879 0.734412223 0.013317474 0.050048731 4.00E-06 5.397511093 -0.29822715 TDEVPAGGS(ph)R ddPTM_A459_MK2206_30min_R1 2 TDEVPAGGSR 10 0 D6RGI7;A0A499FJW5;Q9UJV9;D6RD33 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 1 TDEVPAGGS(1)R;TDEVPAGGS(1)R 92.112 0.027084 10388700 4859.6 4777 4874.7 3429.2 4473.7 3976.3 6431.4 4282.9 5586.4 8063.9 TRUE FALSE 4446.265501 4466.016432 4543.818946 3693.317578 4295.503056 4201.43467 6002.373041 4245.455057 6167.126271 9062.916811 0.490599836 0.492779149 0.501363859 0.407519748 0.473964745 0.463585263 0.662300357 0.468442461 0.680479188 1 13.14575973 -9.102525615 0.583975045 1.020705599 0.470541282 0.864055349 0.061643124 0.679933901 0.381524267 0.089321831 0.026302511 7.90E-10 9.102525615 -0.550164318 down TDEVPAGGS(ph)R ddPTM_A459_MK2206_30min_R2 1 TDEVPAGGSR 10 0 D6RGI7;A0A499FJW5;Q9UJV9;D6RD33 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 1 TDEVPAGGS(1)R 105.36 0.012559 13657000 111930 85392 89777 87884 78896 58552 84063 78968 64264 117210 TRUE FALSE 120499.4469 81151.55745 92770.12037 80703.59607 75798.14662 60780.23739 73025.42712 89289.38874 69853.56656 113385.4473 1.062741734 0.715714048 0.818183661 0.711763264 0.66849978 0.536049721 0.644045853 0.787485439 0.616071711 1 16.79087596 -2.192905685 1.178170572 0.696706596 199.9999999 0.39130811 0.12341083 808.2391962 2.696058457 0.0353215 433477.3396 0.006413488 2.192905685 199.3032933 TDEVPAGGS(ph)RSEAEDEDDEDYVPYVPLR ddPTM_A459_MK2206_30min_R2 1 TDEVPAGGSRSEAEDEDDEDYVPYVPLR 28 1 D6RGI7;A0A499FJW5;Q9UJV9;D6RD33 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 1 T(0.002)DEVPAGGS(0.499)RS(0.499)EAEDEDDEDYVPYVPLR 74.763 5.85E-05 4215700 7888.4 15806 9733.5 12560 13154 13183 15764 12167 11656 10927 TRUE FALSE 8492.341969 15021.09702 10058.01003 11533.80782 12637.50787 13684.6883 13694.16786 13757.26868 12669.81781 10570.45288 0.803403796 1.421045738 0.951521202 1.091136581 1.195550276 1.294617028 1.295513826 1.301483373 1.198606904 1 13.36774957 -6.356663616 3.654529498 1.241693573 1.08341216 0.147722963 0.16723398 0.442846011 11.0013659 0.050907307 0.058866474 4.40E-07 6.356663616 -0.158281412 TDEVPAGGSRS(ph)EAEDEDDEDYVPYVPLR ddPTM_A459_MK2206_30min_R1 4 TDEVPAGGSRSEAEDEDDEDYVPYVPLR 28 1 D6RGI7;A0A499FJW5;Q9UJV9;D6RD33 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 1 T(0.006)DEVPAGGS(0.092)RS(0.903)EAEDEDDEDYVPYVPLR;T(0.018)DEVPAGGS(0.425)RS(0.557)EAEDEDDEDYVPYVPLR;T(0.005)DEVPAGGS(0.184)RS(0.811)EAEDEDDEDYVPYVPLR;T(0.006)DEVPAGGS(0.197)RS(0.797)EAEDEDDEDYVPYVPLR 122.68 2.14E-12 57593000 3291.54 2831.39 2882.88 3145.36 3917.74 2944.59 2974.11 3236.07 2191.05 1302.89 TRUE FALSE 3011.577238 2647.065996 2687.198138 3387.616172 3761.68812 3111.310141 2775.712548 3207.777381 2418.817488 1464.30185 2.056664232 1.807732468 1.835139482 2.313468479 2.568929433 2.124773756 1.895587682 2.190653097 1.651857156 1 10.51599726 -8.579866533 2.672689416 1.000723755 2.097803976 0.70810904 0.218958988 0.192186608 3.330982729 0.235312592 0.063330545 2.63E-09 8.579866533 1.09708022 TDEVPAGGSRS(ph)EAEDEDDEDYVPYVPLR ddPTM_A459_MK2206_30min_R2 1 TDEVPAGGSRSEAEDEDDEDYVPYVPLR 28 1 D6RGI7;A0A499FJW5;Q9UJV9;D6RD33 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 1 T(0.001)DEVPAGGS(0.185)RS(0.814)EAEDEDDEDYVPYVPLR 93.34 2.83E-06 4171200 4601.5 11735 7513.4 11611 11995 11551 9344.8 9039.7 8639.1 6740.5 TRUE FALSE 4953.794378 11152.25696 7763.893006 10662.34416 11524.01603 11990.5814 8117.816535 10221.21983 9390.513302 6520.558037 0.759719391 1.710322476 1.190679227 1.635188905 1.767335858 1.838888839 1.244957332 1.56753759 1.440139517 1 12.67077972 -3.65417112 12.08626135 1.456089379 1.381779009 0 0.340699865 0 0 0.074647192 0 0.000221732 3.65417112 -0.074310369 TDGEPGPQGWS(ph)PR ddPTM_A459_MK2206_30min_R2 2 TDGEPGPQGWSPR 13 0 Q9H773 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 TDGEPGPQGWS(1)PR;TDGEPGPQGWS(1)PR 139.21 0.0009469 32965000 79159 85694 88393 110994 95785 74240 104347 61871 76686 100712 TRUE FALSE 85219.4739 81438.56057 91339.9785 101925.4351 92023.99962 77065.25522 90646.11356 69957.75213 83356.00966 97425.77569 0.874711782 0.83590364 0.937534014 1.046185513 0.94455496 0.791015054 0.930412028 0.718062049 0.855584768 1 16.57201589 -6.743374476 24.98947711 0.845855979 0.929794067 0.125756262 0.087188193 441.4138945 610614.1241 0.029269697 0.029214002 1.81E-07 6.743374476 0.083938089 TDGFAEAIHS(ph)PQVAGVPR ddPTM_A459_MK2206_30min_R1 6 TDGFAEAIHSPQVAGVPR 18 0 P12270 P12270 TPR Nucleoprotein TPR 1 TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;T(0.003)DGFAEAIHS(0.997)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR 134.58 0.00025084 539639000 31037.2 37455.3 30627.7 26150.4 24959.9 19672.3 18623.3 16453.1 16451.54 15267.2 TRUE FALSE 28397.32316 35016.95316 28548.77706 28164.50834 23965.69433 20786.12863 17380.97364 16309.25228 18161.73646 17158.616 1.654989141 2.040779581 1.663815838 1.64142075 1.396714883 1.211410561 1.01295895 0.950499288 1.058461618 1 14.06664557 -6.486443703 1.005020679 0.981828475 1.8427146 0.918350644 0.101185698 0.127455362 0.276774337 0.048702165 0.059145615 3.26E-07 6.486443703 0.860886125 TDGFAEAIHS(ph)PQVAGVPR ddPTM_A459_MK2206_30min_R2 5 TDGFAEAIHSPQVAGVPR 18 0 P12270 P12270 TPR Nucleoprotein TPR 1 TDGFAEAIHS(1)PQVAGVPR;T(0.001)DGFAEAIHS(0.999)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR 183.39 6.67E-10 646048000 294144 355333 315388 291903 220579 198264 181401 165449 162134 179172 TRUE FALSE 316663.8908 337687.6799 325902.8785 268053.5911 211917.9601 205809.0755 157582.8308 187073.7524 176236.1222 173325.6323 1.826988233 1.948284714 1.880292454 1.546531737 1.222657938 1.187412806 0.90917211 1.079319601 1.016792034 1 17.4031255 -6.169364411 1.328424677 1.020623416 1.92322138 0.967644129 0.068440753 0.067661918 0.241663065 0.025904422 0.040061421 6.77E-07 6.169364411 0.902597965 TDGSIS(ph)GDRQPVTVADYISR ddPTM_A459_MK2206_30min_R1 2 TDGSISGDRQPVTVADYISR 20 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.007)DGS(0.123)IS(0.853)GDRQPVT(0.017)VADYISR;TDGS(0.012)IS(0.574)GDRQPVT(0.38)VADY(0.034)ISR 126.25 0.0010235 81584000 5246.2 4158.7 4614.9 4997.9 5145.2 3917.3 4308.9 4566.4 3895 3817.4 TRUE FALSE 4799.983141 3887.967874 4301.653446 5382.839124 4940.255789 4139.094141 4021.461143 4526.476446 4299.899188 4290.328332 1.118791563 0.906216861 1.002639685 1.254645031 1.151486648 0.964749973 0.937331792 1.055041968 1.002230798 1 12.06687234 -6.779642218 24.95826824 0.991902324 1.081380069 0.216165584 0.09005086 463.9327324 636103.2015 0.035255259 0.031149176 1.66E-07 6.779642218 0.089477745 TDGSIS(ph)GDRQPVTVADYISR ddPTM_A459_MK2206_30min_R2 2 TDGSISGDRQPVTVADYISR 20 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.02)DGS(0.004)IS(0.968)GDRQPVT(0.007)VADY(0.001)ISR;T(0.025)DGS(0.348)IS(0.624)GDRQPVT(0.003)VADYISR 122.29 0.0011529 40616000 125072 135416 129936 128381 154637 150758 144640 105664 116231 138736 TRUE FALSE 134647.6085 128691.4384 134268.0014 117891.8616 148565.1744 156495.2013 125648.5943 119474.6476 126340.5623 134209.0557 1.003267684 0.958887891 1.000439208 0.878419575 1.106968331 1.166055454 0.936215471 0.890213011 0.941371368 1 17.03412249 -7.471277363 24.99960075 0.932117384 1.016212521 0.187798951 0.077348923 585.0405421 283438.0592 0.03488029 0.023516034 3.38E-08 7.471277363 0.084095136 TDKS(ph)SASAPDVDDPEAFPALA ddPTM_A459_MK2206_30min_R1 1 TDKSSASAPDVDDPEAFPALA 21 1 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51;Q8NC51-3 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 T(0.183)DKS(0.468)S(0.153)AS(0.197)APDVDDPEAFPALA 65.197 0.0056457 6322500 3148.9 4080.4 3894.1 3036.7 2605.8 2687.8 3004.3 3160.1 3173.5 2846.5 TRUE FALSE 2881.069519 3814.765218 3629.779342 3270.58716 2502.005468 2839.980913 2803.888629 3132.471579 3503.396681 3199.14591 0.900574591 1.192432395 1.134608875 1.022331351 0.78208545 0.887730974 0.876449123 0.979158709 1.09510375 1 11.64347108 -6.007153805 24.04131535 0.92769725 1.086018394 0.264235166 0.104595293 246.6175581 828801.4084 0.030693025 0.043498737 9.84E-07 6.007153805 0.158321144 TDKTDEPVPGASSATAALS(ph)PQEK ddPTM_A459_MK2206_30min_R2 1 TDKTDEPVPGASSATAALSPQEK 23 1 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;E7ERH1 E9PGF5 TNS1 Tensin-1 1 TDKTDEPVPGAS(0.002)S(0.007)ATAALS(0.991)PQEK 130.62 1.21E-05 0 13738 13629 11576 14179 9716.5 8483.9 9774.1 7793.4 7633.6 10845 TRUE FALSE 14789.79184 12952.20368 11961.93806 13020.53034 9334.981389 8806.760759 8490.748929 8812.024139 8297.55673 10491.12854 1.409742697 1.234586311 1.140195549 1.241099115 0.889797638 0.839448371 0.809326556 0.839950069 0.79091174 1 13.35688226 -6.285664893 3.593873346 0.843936492 1.251992744 0.848949468 0.08157163 0.086806601 2.417159084 0.025950428 0.031401869 5.18E-07 6.285664893 0.408056252 TDLEKDIISDTSGDFR ddPTM_A459_MK2206_30min_R1 3 TDLEKDIISDTSGDFR 16 1 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;; 159.41 0.0001739 54523000 14583.5 15942.42 16618.85 15564.94 15190.82 13714.38 13974.2 15083.21 12809.71 10523.12 FALSE TRUE 13343.09674 14904.56556 15490.80876 16763.75438 14585.73747 14490.87634 13042.00662 14951.33909 14141.32519 11826.80355 1.1282082 1.260236166 1.309805198 1.417437459 1.233278071 1.225257212 1.102749915 1.26419104 1.195701369 1 13.52977259 -6.862374543 2.637952413 1.163123126 1.281739492 0.283696417 0.093323893 0.41285791 5.836074112 0.036957717 0.032262342 1.37E-07 6.862374543 0.118616366 TDLEKDIISDTSGDFR ddPTM_A459_MK2206_30min_R2 2 TDLEKDIISDTSGDFR 16 1 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 133.48 0.0014983 32830000 122337 181646 173828 190525 188556 156155 206119 157929 182543 184043 FALSE TRUE 131703.2148 172625.7238 179623.3388 174958.498 181152.344 162097.5879 179055.3277 178570.8626 198420.2602 178037.692 0.739749057 0.969602121 1.008906242 0.98270482 1.017494341 0.910467812 1.005715844 1.002994706 1.114484568 1 17.44182318 -4.757163267 3.677989744 1.001293912 0.703649323 0.742023274 0.046650458 0.151448268 3.433032 0.011878277 0.128609069 1.75E-05 4.757163267 -0.297644589 TDLEKDIISDTSGDFRK ddPTM_A459_MK2206_30min_R1 1 TDLEKDIISDTSGDFRK 17 2 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 85.28 0.0074919 52250000 5515.2 6322.6 6830 6938.7 6914.3 5121.6 5210 6786.4 4566.6 3088.8 FALSE TRUE 5046.103279 5910.997591 6366.398629 7473.119876 6638.88879 5411.580566 4862.450406 6727.06722 5041.314412 3471.463863 1.45359522 1.702739197 1.833923348 2.152728696 1.912417658 1.558875673 1.400691638 1.937818593 1.452215725 1 11.76132844 -6.830060164 6.574612187 1.521113637 1.824852784 0.274607284 0.270781277 0.340735694 25.66391453 0.097559063 0.086402511 1.48E-07 6.830060164 0.303739147 TDLEKDIISDTSGDFRK ddPTM_A459_MK2206_30min_R2 1 TDLEKDIISDTSGDFRK 17 2 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 58.814 0.041844 9727600 19413 47150 32888 40317 45261 36541 44458 25858 37837 40213 FALSE TRUE 20899.27421 44808.59956 33984.46951 37022.97213 43483.82572 37931.59336 38620.6112 29237.72938 41127.99387 38900.8531 0.537244624 1.151866758 0.873617589 0.951726484 1.117811622 0.975083844 0.992795996 0.751596098 1.05725172 1 15.24751417 -4.74687273 24.99740037 0.977433802 0.537243481 0.601166336 0.109405601 546.9437186 938541.4037 0.026693555 0.58040529 1.79E-05 4.74687273 -0.440190321 TDLETS(ph)PGAAPR ddPTM_A459_MK2206_30min_R2 1 TDLETSPGAAPR 12 0 Q6F5E8-2;Q6F5E8 Q6F5E8-2 RLTPR Leucine-rich repeat-containing protein 16C 1 T(0.001)DLET(0.158)S(0.841)PGAAPR 96.067 0.01746 6032300 25082 36904 26028 34365 37700 54176 23665 28091 46202 26841 TRUE FALSE 27002.2972 35071.40102 26895.76053 31557.26957 36219.70857 56237.70564 20557.75707 31762.59015 50220.56645 25965.18037 1.039942601 1.350708931 1.035839542 1.215368779 1.394933833 2.165889273 0.79174328 1.223276315 1.934150494 1 14.66429063 -6.241155659 4.682381477 1.436626127 1.161342322 0.096400595 0.38729201 0.507510676 30.0698463 0.118906348 0.148776521 5.74E-07 6.241155659 -0.275283805 TDLQGSAS(ph)PSK ddPTM_A459_MK2206_30min_R1 2 TDLQGSASPSK 11 0 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 T(0.009)DLQGS(0.003)AS(0.943)PS(0.046)K;T(0.06)DLQGS(0.001)AS(0.926)PS(0.013)K 137.62 0.0013177 12088900 6030.4 6348 5718.2 4246.3 4998.6 4638.3 6211.9 5062.9 6755.9 8898.6 TRUE FALSE 5517.482813 5934.744046 5330.064516 4573.350762 4799.495177 4900.916538 5797.515485 5018.635599 7458.199981 10001.02575 0.551691692 0.593413535 0.532951784 0.45728817 0.479900292 0.490041388 0.579692087 0.501812087 0.745743504 1 13.28786036 -8.538983176 2.42627637 0.999488007 0.522038904 0.926139512 0.042503861 0.077033419 1.077542774 0.04463889 0.012159532 2.89E-09 8.538983176 -0.477449103 TDLQGSAS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 TDLQGSASPSK 11 0 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 T(0.039)DLQGS(0.005)AS(0.93)PS(0.026)K 122.66 0.0040868 13697000 107930 75024 93760 67491 66897 57203 101100 78631 64212 111620 TRUE FALSE 116193.2038 71298.41726 96885.9116 61976.76941 64270.28765 59379.90025 87825.44856 88908.34168 69797.04369 107977.8485 1.076083709 0.660305963 0.897275811 0.573976702 0.595217339 0.549926685 0.813365424 0.823394269 0.646401504 1 16.72037585 -10.14658993 24.62812645 0.999999146 0.730038308 0.197608593 0.158178499 0 0 0.153021497 0.037113164 7.14E-11 10.14658993 -0.269960837 TDLQGSAS(ph)PSKVEGVHTPR ddPTM_A459_MK2206_30min_R1 3 TDLQGSASPSKVEGVHTPR 19 1 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 TDLQGS(0.202)AS(0.595)PS(0.202)KVEGVHT(0.001)PR;T(0.001)DLQGS(0.079)AS(0.912)PS(0.009)KVEGVHTPR;TDLQGS(0.024)AS(0.734)PS(0.24)KVEGVHT(0.002)PR 87.511 0.0018364 67267000 19883.9 16803.7 17973.7 16027.7 15917.8 14357.7 16649.9 17851.8 16242.4 14464 TRUE FALSE 18192.66989 15709.77608 16753.69532 17262.15623 15283.76032 15170.62057 15539.21555 17695.72359 17930.8556 16255.90952 1.119141926 0.966404006 1.030621837 1.061900364 0.940197182 0.933237267 0.955911789 1.088571733 1.103036135 1 13.98867666 -10.53589508 3.981179758 0.999998339 1.016879732 0.004343008 0.066616133 49444029.59 2355.273183 900.2321734 0.016957224 2.91E-11 10.53589508 0.016881393 TDLQGSAS(ph)PSKVEGVHTPR ddPTM_A459_MK2206_30min_R2 2 TDLQGSASPSKVEGVHTPR 19 1 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 T(0.001)DLQGS(0.091)AS(0.534)PS(0.373)KVEGVHT(0.001)PR;T(0.002)DLQGS(0.073)AS(0.808)PS(0.114)KVEGVHT(0.003)PR 56.819 0.022395 81635000 196211 282131 269129 275985 300210 232401 392600 234675 260020 287649 TRUE FALSE 211233.065 268120.7848 278101.6265 253436.1427 288422.247 241245.1829 341051.1484 265347.8283 282636.0696 278263.0367 0.759112915 0.963551566 0.999419937 0.910779044 1.036509378 0.866968124 1.225643019 0.953586331 1.015715465 1 18.08608975 -4.154641299 1.344922958 1.00437631 8.54E-19 0.391331744 0.08978469 6.260857776 3.036639616 0.025071788 12.99561458 7.00E-05 4.154641299 -1.00437631 TDLQGSASPS(ph)KVEGVHTPR ddPTM_A459_MK2206_30min_R1 1 TDLQGSASPSKVEGVHTPR 19 1 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 TDLQGS(0.002)AS(0.019)PS(0.978)KVEGVHTPR 66.201 0.0097476 17234000 13931 12434 14666 12403 12498 10946 12385 13942 11066 9925.4 TRUE FALSE 12746.0953 11624.54434 13670.51278 13358.28121 12000.1782 11565.75306 11558.81925 13820.10656 12216.3503 11155.03348 1.142631738 1.042089596 1.225501725 1.197511529 1.07576353 1.036819215 1.036197629 1.238912154 1.095142414 1 13.44540722 -6.285848925 23.87443548 1.088021684 1.149342517 0.175898926 0.074627642 979.1264516 957658.2515 0.024456901 0.027749217 5.18E-07 6.285848925 0.061320833 TDLQGSASPS(ph)KVEGVHTPR ddPTM_A459_MK2206_30min_R2 3 TDLQGSASPSKVEGVHTPR 19 1 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 TDLQGS(0.002)AS(0.012)PS(0.815)KVEGVHT(0.17)PR;T(0.001)DLQGS(0.07)AS(0.182)PS(0.745)KVEGVHT(0.002)PR;TDLQGSAS(0.001)PS(0.993)KVEGVHT(0.006)PR 87.669 0.0014148 82440000 324005 554213 437928 567640 575750 465210 615171 426242 512887 485410 TRUE FALSE 348811.0719 526691.5883 452528.3009 521261.9962 553143.1621 482913.8925 534398.3087 481953.2929 557496.9842 469571.1115 0.74282907 1.121643933 0.963705581 1.110081058 1.177975281 1.028414825 1.138056187 1.02636913 1.187247193 1 18.84098413 -4.757651059 24.99966726 1.084533813 0.742828582 0.665973471 0.07242495 63.04922582 416010.9971 0.017024712 0.124367345 1.75E-05 4.757651059 -0.341705231 TDMDNQIVVSDYAQMDR ddPTM_A459_MK2206_30min_R1 2 TDMDNQIVVSDYAQMDR 17 0 P50991-2;P50991 P50991-2 CCT4 T-complex protein 1 subunit delta 0 ; 222.56 1.39E-49 3130200 1219.87 1176.44 1451.68 1093.7 1129.47 1232.35 1217.98 1069.9 1003.41 853.3 FALSE TRUE 1116.113651 1099.853542 1353.144006 1177.936964 1084.480818 1302.124592 1136.730777 1060.545977 1107.71806 959.0132461 1.163814635 1.146859594 1.410975304 1.228280181 1.130829864 1.357775398 1.185312905 1.105872084 1.15506023 1 9.905406932 -8.355206281 0.868188985 1.008135434 1.239397911 0.391625358 0.088551006 0.606474942 1.003499722 0.086069702 0.031295097 4.41E-09 8.355206281 0.231262477 TDNSSLS(ph)SPLNPK ddPTM_A459_MK2206_30min_R1 1 TDNSSLSSPLNPK 13 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 TDNSS(0.006)LS(0.83)S(0.163)PLNPK 162.72 0.00036325 14198000 4357.4 4081.2 4033.1 3110.4 2958.6 3273.9 3379.3 3289.2 3235.4 2769.7 TRUE FALSE 3986.780248 3815.513138 3759.344409 3349.963547 2840.752697 3459.265389 3153.873063 3260.442871 3571.731408 3112.831346 1.280756907 1.225737187 1.20769293 1.076178943 0.912594478 1.111292262 1.01318469 1.047420341 1.147422077 1 11.6040117 -5.744001374 3.259775263 1.039589789 1.245519373 0.686594677 0.060914948 0.136381302 2.996992496 0.017412033 0.030467146 1.80E-06 5.744001374 0.205929584 TDNSSLS(ph)SPLNPK ddPTM_A459_MK2206_30min_R2 2 TDNSSLSSPLNPK 13 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 TDNS(0.001)S(0.014)LS(0.492)S(0.492)PLNPK;TDNSS(0.016)LS(0.802)S(0.182)PLNPK 185.66 0.00010967 30913000 176082 134551 115394 137787 143003 123463 184475 133596 85118 146972 TRUE FALSE 189562.9733 127869.393 119241.1784 126529.3613 137387.9837 128161.471 160253.2109 151057.4559 92521.40978 142176.3157 1.333295018 0.899371969 0.838685247 0.889946829 0.96632117 0.901426306 1.127144209 1.06246568 0.650751212 1 17.11732163 -4.758688604 24.93880072 0.93107271 1.333295573 0.494233882 0.123447302 64.21849916 582096.4234 0.030860074 0.207195551 1.74E-05 4.758688604 0.402222863 TDNSSLSS(ph)PLNPK ddPTM_A459_MK2206_30min_R2 1 TDNSSLSSPLNPK 13 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 TDNSS(0.001)LS(0.294)S(0.705)PLNPK 164.64 0.00036265 5912000 69989 53432 43029 46220 45085 42916 69254 50115 42268 56243 TRUE FALSE 75347.41165 50778.64458 44463.56538 42443.67815 43314.73637 44549.19845 60160.86661 56665.20257 45944.39424 54407.79552 1.384864263 0.933297225 0.817227843 0.780102883 0.796112689 0.818801755 1.105739831 1.041490508 0.844445062 1 15.73152575 -4.763619353 4.963580374 0.8969181 1.415862975 0.646506972 0.106852926 0.119442511 7.65371021 0.029666954 0.216700837 1.72E-05 4.763619353 0.518944875 TDNSVASS(ph)PSSAISTATPSPK ddPTM_A459_MK2206_30min_R2 2 TDNSVASSPSSAISTATPSPK 21 0 H0Y6I7;F5H5V6;F5H6S1;F8W8R6;A0A087X0R0;O15550 H0Y6I7 KDM6A Lysine-specific demethylase 6A 1 TDNSVAS(0.004)S(0.99)PS(0.002)S(0.004)AISTATPSPK;TDNSVAS(0.025)S(0.783)PS(0.057)S(0.134)AISTATPSPK 241.92 3.23E-31 8175900 46567 48333 42064 46577 48204 40668 50863 41423 39516 54023 TRUE FALSE 50132.20532 45932.8535 43466.39277 42771.51011 46311.26875 42215.64924 44184.627 46837.12833 42953.03025 52260.23393 0.959280155 0.878925524 0.831729778 0.818433193 0.886166503 0.80779679 0.845473196 0.89622883 0.821906582 1 15.67342596 -10.68719719 4.649335715 1.000017771 0.858899279 0.476717868 0.043760984 8.36E-06 1.50E-06 0.042516494 0.010310422 2.05E-11 10.68719719 -0.141118492 TDNSVASSPSSAISTATPS(ph)PK ddPTM_A459_MK2206_30min_R2 2 TDNSVASSPSSAISTATPSPK 21 0 H0Y6I7;F5H5V6;F5H6S1;F8W8R6;A0A087X0R0;O15550 H0Y6I7 KDM6A Lysine-specific demethylase 6A 1 TDNSVASSPSSAISTAT(0.049)PS(0.951)PK;TDNSVASSPSSAISTAT(0.229)PS(0.771)PK 278.79 8.25E-73 12431200 140403 130595 147964 119872 124161 79383 152219 119716 104816 156318 TRUE FALSE 151152.3616 124109.8422 152897.0459 110078.0741 119285.8153 82403.97569 132232.4625 135363.2922 113932.7062 151217.3565 0.999570189 0.820738076 1.011107782 0.727946029 0.788836798 0.544937285 0.874452943 0.895157113 0.753436701 1 17.20626421 -5.766679796 24.99753598 0.785736862 0.931498625 0.222330348 0.123031887 190.1432063 907015.8208 0.034270031 0.052577156 1.71E-06 5.766679796 0.145761763 TDNVSDFSES(ph)SDSENSNKR ddPTM_A459_MK2206_30min_R2 1 TDNVSDFSESSDSENSNKR 19 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 TDNVS(0.011)DFS(0.028)ES(0.521)S(0.42)DS(0.009)ENS(0.009)NKR 49.577 0.04677 5512100 10106 11537 9326.9 8967.7 13437 9500.3 11975 13578 5665.5 10916 TRUE FALSE 10879.72313 10964.08936 9637.854191 8235.010224 12909.39586 9861.840574 10402.66812 15352.69122 6158.274949 10559.81181 1.030295172 1.03828454 0.912691851 0.779844411 1.222502455 0.933903061 0.985118703 1.453879244 0.583180369 1 13.3662965 -6.257392607 24.99033554 1.045432621 0.945308895 0.035864938 0.217786541 1279.517147 7901501.384 0.062666352 0.077927179 5.53E-07 6.257392607 -0.100123726 TDNVSDFSESS(ph)DSENSNKR ddPTM_A459_MK2206_30min_R2 1 TDNVSDFSESSDSENSNKR 19 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 TDNVSDFS(0.01)ES(0.091)S(0.822)DS(0.053)ENS(0.024)NKR 54.171 0.031779 4956700 12804 14126 11840 13017 11110 12125 17493 11956 9060.3 14038 TRUE FALSE 13784.28408 13424.52338 12234.73969 11953.46946 10673.76558 12586.42537 15196.14809 13518.69025 9848.348517 13579.94121 1.015047405 0.988555339 0.900942022 0.880229839 0.785994977 0.92683946 1.119014276 0.995489601 0.725212898 1 13.72918961 -5.140229279 4.299586534 0.91830328 1.009050399 0.09712184 0.104713647 0.591942372 17.61582738 0.028614427 0.085637817 7.24E-06 5.140229279 0.090747119 TDPPAVNGASLGPSIS(ph)EPDLTSVK ddPTM_A459_MK2206_30min_R1 2 TDPPAVNGASLGPSISEPDLTSVK 24 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 TDPPAVNGASLGPS(0.033)IS(0.967)EPDLTSVK;TDPPAVNGASLGPS(0.003)IS(0.997)EPDLTSVK 192.53 8.72E-27 25151000 10327.4 11438.5 11115.4 10332.3 10202.1 9123.8 9621.4 10522.4 10437.4 9271.7 TRUE FALSE 9449.000399 10693.85157 10360.91762 11128.09554 9795.728754 9640.381671 8979.573961 10430.40377 11522.40508 10420.34819 0.906783557 1.026247048 0.99429668 1.06791974 0.940057719 0.925149668 0.86173454 1.000964994 1.105760083 1 13.34711587 -8.005808282 24.97435669 1.053040892 0.963676332 0.269049578 0.06081373 343.1682158 1475541.294 0.036898704 0.016834214 9.87E-09 8.005808282 -0.08936456 TDPPAVNGASLGPSIS(ph)EPDLTSVK ddPTM_A459_MK2206_30min_R2 1 TDPPAVNGASLGPSISEPDLTSVK 24 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 TDPPAVNGASLGPS(0.107)IS(0.803)EPDLT(0.07)S(0.021)VK 101 3.20E-06 2855000 16508 21269 17256 18560 19458 15247 23689 16388 16156 18419 TRUE FALSE 17771.86517 20212.81239 17831.30643 17043.58863 18693.98115 15827.23527 20578.60584 18529.96787 17561.21968 17817.98954 0.99741136 1.134404774 1.000747384 0.956538255 1.049163325 0.888272789 1.15493422 1.039958399 0.985589291 1 14.12104694 TDQDEEHCR ddPTM_A459_MK2206_30min_R2 2 TDQDEEHCR 9 0 Q16186;A0A087WX59;A0A087WUX6 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 0 ; 153.1 0.0014561 1517720 6956.6 3396.4 3029.38 4156.56 5859.2 6863.9 7667 56365 24745 7965.1 FALSE TRUE 7489.202645 3227.739715 3130.378017 3816.955752 5629.138368 7125.110524 6660.31369 63732.09903 26897.27537 7705.199439 0.971967397 0.41890411 0.406268266 0.495374037 0.730563616 0.924714614 0.864392122 8.27131076 3.490795479 1 12.91161658 -7.625171593 12.30159825 4.658785319 0.6535774 0.482836353 1.677022277 0.342395041 38.94980115 0.730023837 0.421276497 2.37E-08 7.625171593 -4.005207919 TDQEAPNASQPT(ph)PPPLPK ddPTM_A459_MK2206_30min_R1 1 TDQEAPNASQPTPPPLPK 18 0 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 TDQEAPNASQPT(1)PPPLPK 161.95 2.09E-05 4632700 1059.5 1181.3 1112.2 898.73 929.35 1045.6 1045.4 927.79 879.67 978.72 TRUE FALSE 969.3839613 1104.397155 1036.706963 967.9503403 892.3320216 1104.800968 975.6632734 919.6784298 971.1148444 1099.971223 0.881281202 1.00402368 0.942485532 0.879977876 0.811232152 1.004390793 0.886989817 0.836093173 0.882854773 1 10.10325007 -5.703727803 6.792366316 0.893515246 0.949475539 0.074029901 0.064572131 0.443849233 40.8041656 0.017328204 0.029992552 1.98E-06 5.703727803 0.055960293 TDQEAPNASQPT(ph)PPPLPK ddPTM_A459_MK2206_30min_R2 2 TDQEAPNASQPTPPPLPK 18 0 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 TDQEAPNASQPT(1)PPPLPK;TDQEAPNAS(0.004)QPT(0.996)PPPLPK 141.18 0.00072938 27253000 58996 70700 61137 77294 73358 64649 86514 62490 68201 75110 TRUE FALSE 63512.77912 67189.14081 63175.27707 70978.83295 70477.59633 67109.263 75154.60788 70657.65756 74132.9997 72659.16685 0.874119287 0.924716642 0.869474284 0.976873752 0.969975288 0.923617293 1.034344476 0.972453451 1.020284197 1 16.1488572 -5.932713824 0.513925988 1.008209098 0.861201923 0.640117553 0.032485157 1.008766289 0.450474426 0.024074809 0.07918984 1.17E-06 5.932713824 -0.147007174 TDQGILVTNQDACALASSVSS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 TDQGILVTNQDACALASSVSSPVK 24 0 Q8IWI9;Q8IWI9-3;H3BP52;H3BTF4 Q8IWI9 MGA MAX gene-associated protein 1 TDQGILVTNQDACALASSVS(0.058)S(0.941)PVK;TDQGILVTNQDACALASSVS(0.239)S(0.76)PVK 191.19 1.25E-26 12878100 147466 140691 141114 143069 140210 111635 179997 132888 101787 153769 TRUE FALSE 158756.1103 133704.4895 145818.6703 131379.805 134704.6509 115883.3482 156363.1777 150256.9179 110640.2493 148751.5301 1.06725699 0.898844465 0.980283498 0.883216495 0.90556817 0.779039705 1.051170214 1.01012015 0.743792344 1 17.18254498 -4.757008058 24.80010906 0.917671975 1.067257237 0.187405332 0.093918979 210.4483262 1177618.478 0.022838437 0.175343103 1.75E-05 4.757008058 0.149585262 TDS(ph)PDMHEDT ddPTM_A459_MK2206_30min_R1 1 TDSPDMHEDT 10 0 Q9BW61 Q9BW61 DDA1 DET1- and DDB1-associated protein 1 1 T(0.007)DS(0.992)PDMHEDT(0.001) 104.43 0.013157 7407900 5246.4 6652.2 6230.6 4646.3 5113.5 4323 5235 5077.1 5159.6 4250.7 TRUE FALSE 4800.16613 6219.140571 5807.684231 5004.158831 4909.818467 4567.764524 4885.782702 5032.71145 5695.958884 4777.308807 1.00478456 1.301808366 1.215681143 1.047484899 1.027737303 0.956137589 1.022706067 1.053461615 1.192294472 1 12.22198242 -5.770761797 23.52801225 1.039979458 1.186863055 0.308942863 0.089280182 100.5171778 253687.406 0.025084285 0.037852122 1.70E-06 5.770761797 0.146883597 TDS(ph)PWIKPAR ddPTM_A459_MK2206_30min_R2 1 TDSPWIKPAR 10 1 A0A0C4DGF8;A0A1B0GV09;Q9H9B1-3;Q9H9B1;A0A0D9SER9;A0A1W2PPZ7;A0A1B0GVZ8;A0A1B0GUD1;A0A1B0GU48;Q9H9B1-4;A0A0D9SEQ1 A0A0C4DGF8 EHMT1 Histone-lysine N-methyltransferase EHMT1 1 T(0.426)DS(0.574)PWIKPAR 73.632 0.035557 4820500 38386 34288 31748 25067 30809 27528 34615 28225 28630 29377 TRUE FALSE 41324.86167 32585.30778 32806.46247 23018.94591 29599.28386 28575.59733 30070.00892 31914.10441 31120.18565 28418.4309 1.454157051 1.14662586 1.154407947 0.810000594 1.041552363 1.00553044 1.05811644 1.123007267 1.095070511 1 14.79453928 -4.631558823 1.549764104 1.030168465 1.736048795 0.679022821 0.087414893 0.964800426 1.664565262 0.025588611 1.159808374 2.34E-05 4.631558823 0.70588033 TDS(ph)SPNQAR ddPTM_A459_MK2206_30min_R2 1 TDSSPNQAR 9 0 A6NLN1;P26599;P26599-2;P26599-3;K7ES59;A0A087WU68 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 1 T(0.04)DS(0.48)S(0.48)PNQAR 92.611 0.025664 548740 3866.5 1303.7 1918.2 2486.9 4177.9 1925.6 2814.9 16164 7213.5 3960.2 TRUE FALSE 4162.522213 1238.960154 1982.151831 2283.712315 4013.854654 1998.880057 2445.300249 18276.6903 7840.917191 3830.978998 1.086542687 0.323405624 0.517400861 0.596117159 1.047736011 0.521767428 0.638296438 4.770762332 2.046713698 1 11.9034974 -7.709314928 24.96930367 2.806555551 0.661543576 0.484612254 0.904895309 65.60045 31424.57588 0.39346368 0.227165996 1.95E-08 7.709314928 -2.145011976 TDS(ph)TSDGRPAWMR ddPTM_A459_MK2206_30min_R1 2 TDSTSDGRPAWMR 13 1 Q14204;A0A2R8Y706;A0A2R8Y5T0;A0A2R8Y542;A0A2R8Y6I5 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 T(0.014)DS(0.908)T(0.034)S(0.045)DGRPAWMR;T(0.016)DS(0.818)T(0.032)S(0.134)DGRPAWMR 91.712 0.010681 363160000 5605.3 5301.9 5429.4 4823.7 4539.4 4081.4 4478.4 4679 4704.9 4598.6 TRUE FALSE 5128.5398 4956.745346 5060.867455 5195.22221 4358.586086 4312.485341 4179.654107 4638.091996 5193.991192 5168.309286 0.992305127 0.959065155 0.979211416 1.005207298 0.84332919 0.834409301 0.808708202 0.897409915 1.004969112 1 12.33547669 -6.254626836 24.95200411 0.885350229 0.981831685 0.299400337 0.062461769 626.7425747 2295542.433 0.019259091 0.024310536 5.56E-07 6.254626836 0.096481457 TDS(ph)TSDGRPAWMR ddPTM_A459_MK2206_30min_R2 3 TDSTSDGRPAWMR 13 1 Q14204;A0A2R8Y706;A0A2R8Y5T0;A0A2R8Y542;A0A2R8Y6I5 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 T(0.013)DS(0.753)T(0.102)S(0.132)DGRPAWMR;T(0.007)DS(0.856)T(0.068)S(0.068)DGRPAWMR;TDS(0.994)T(0.005)S(0.001)DGRPAWMR 135.94 0.0053196 304837000 209248 270385 234113 229407 257676 238766 274505 202800 217837 230514 TRUE FALSE 225268.1878 256958.0741 241918.2106 210663.7143 247558.3455 247852.4074 238462.1638 229306.6563 236784.0685 222992.3471 1.010205914 1.152317904 1.084872256 0.944712754 1.110165209 1.111483917 1.069373756 1.02831626 1.061848407 1 17.76663467 -8.791848561 0.88356534 1.000755663 1.069618817 0.107548189 0.055651216 2.336619589 3.520052864 0.055323811 0.018734602 1.61E-09 8.791848561 0.068863154 TDS(ph)YSAGQSVEILDGVELGEPAHK ddPTM_A459_MK2206_30min_R1 2 TDSYSAGQSVEILDGVELGEPAHK 24 0 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 T(0.185)DS(0.769)YS(0.045)AGQSVEILDGVELGEPAHK;T(0.181)DS(0.776)YS(0.043)AGQSVEILDGVELGEPAHK 210.61 4.81E-32 10036100 2257.15 2442.34 2508.93 2232.35 1881.37 2028.94 2854.84 2869.6 3658.9 4691.4 TRUE FALSE 2065.16754 2283.343222 2338.630822 2404.285984 1806.431049 2143.816829 2664.398833 2844.51139 4039.255749 5272.60605 0.391678711 0.433057809 0.443543629 0.455995756 0.342606869 0.406595298 0.505328638 0.539488701 0.766083358 1 12.36430049 -8.392239204 1.167005828 1.000844917 0.414944995 0.967930816 0.034406257 0.076010801 0.221337088 0.034429416 0.011031252 4.05E-09 8.392239204 -0.585899921 down TDSAPDQQVETGKS(ph)PSLSGASAK ddPTM_A459_MK2206_30min_R2 1 TDSAPDQQVETGKSPSLSGASAK 23 1 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 TDSAPDQQVET(0.001)GKS(0.732)PS(0.258)LS(0.008)GASAK 99.971 0.00093589 0 11456 8696 10880 12923 8802.2 5702.7 10996 11536 7842.4 14033 TRUE FALSE 12333.08017 8264.169285 11242.73377 11867.14956 8456.5814 5919.720245 9552.211991 13043.79481 8524.517776 13575.10436 0.908507209 0.608773905 0.828187649 0.874184776 0.6229478 0.436071804 0.703656616 0.960861476 0.627952283 1 13.72867567 -12.98331391 18.37678774 0.995589358 0.743003789 0 0.175153802 0 0 0 0.040115636 1.04E-13 12.98331391 -0.252585569 TDSCS(ph)SAQAQYDTPK ddPTM_A459_MK2206_30min_R2 1 TDSCSSAQAQYDTPK 15 0 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 "Discoidin, CUB and LCCL domain-containing protein 2" 1 T(0.006)DS(0.006)CS(0.61)S(0.377)AQAQYDTPK 180.56 2.02E-05 10465000 37561 26566 31769 26908 23496 27319 49237 24661 45674 42073 TRUE FALSE 40436.69904 25246.77107 32828.1626 24709.53033 22573.42898 28358.64369 42772.12276 27884.27737 49646.64196 40700.16146 0.993526748 0.620311325 0.806585562 0.607111359 0.554627505 0.696769808 1.050907938 0.685114662 1.219814374 1 15.3127469 -8.256732609 24.99378437 1.109907201 0.746039268 0.440749156 0.161216084 332.6898308 1766666.72 0.118332668 0.04138283 5.54E-09 8.256732609 -0.363867934 TDSCSS(ph)AQAQYDTPK ddPTM_A459_MK2206_30min_R1 2 TDSCSSAQAQYDTPK 15 0 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 "Discoidin, CUB and LCCL domain-containing protein 2" 1 TDSCS(0.029)S(0.971)AQAQYDTPK;TDSCS(0.1)S(0.9)AQAQYDTPK 260.25 2.22E-36 10920400 4475.6 4901.3 3929.2 4490.1 4906.1 4715.4 5848.9 6072 6553.9 7139.5 TRUE FALSE 4094.926718 4582.224479 3662.496851 4835.92828 4710.679648 4982.381873 5458.730553 6018.913144 7235.201358 8023.99516 0.510335143 0.57106521 0.456443053 0.60268335 0.587074089 0.620935304 0.680300828 0.750114254 0.901695628 1 12.97010502 -7.960948636 0.65289482 1.010890899 0.526173652 0.948319284 0.036921502 0.137998862 0.124595129 0.03465814 0.016824333 1.09E-08 7.960948636 -0.484717247 TDSCSS(ph)AQAQYDTPK ddPTM_A459_MK2206_30min_R2 1 TDSCSSAQAQYDTPK 15 0 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 "Discoidin, CUB and LCCL domain-containing protein 2" 1 TDSCS(0.046)S(0.953)AQAQYDTPK 162.76 0.00010901 10532000 43135 28050 29702 29311 32068 35556 55513 28766 55883 46273 TRUE FALSE 46437.44877 26657.07779 30692.24986 26916.19754 30808.84919 36909.1085 48224.07642 32525.81497 60743.60233 44763.1158 1.037404299 0.59551435 0.685659372 0.601303038 0.68826418 0.824542882 1.077317241 0.726620888 1.357001211 1 15.45002284 -7.060931924 3.191932717 1.018007502 0.706822722 0.39642016 0.184032314 0.268484059 5.393182475 0.071389849 0.05570211 8.69E-08 7.060931924 -0.31118478 TDSLAAT(ph)PPAAK ddPTM_A459_MK2206_30min_R1 1 TDSLAATPPAAK 12 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 TDS(0.001)LAAT(0.999)PPAAK 104.7 0.022532 9918400 4218.3 4093.3 4670.6 3832 4926.9 5489.4 8353.9 8360.7 8760.8 9243.3 TRUE FALSE 3859.511434 3826.825426 4353.572685 4127.141304 4730.65114 5800.205084 7796.626574 8287.603281 9671.516511 10388.42979 0.371520192 0.368373807 0.419078992 0.397282495 0.455376918 0.558333184 0.75051059 0.797772469 0.930989255 1 13.34268999 -7.420670059 0.788285966 0.992843013 0.369879247 0.991378679 0.021444603 0.053416975 0.063096758 0.018478772 0.010106936 3.80E-08 7.420670059 -0.622963766 down TDSLAAT(ph)PPAAK ddPTM_A459_MK2206_30min_R2 3 TDSLAATPPAAK 12 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.007)DS(0.015)LAAT(0.978)PPAAK;T(0.019)DS(0.003)LAAT(0.978)PPAAK;T(0.045)DS(0.009)LAAT(0.947)PPAAK 141.73 0.0022632 28920500 105660 130031 130410 153217 189379 205393 349220 290938 278430 386230 TRUE FALSE 113749.4108 123573.8496 134757.8043 140698.681 181943.0289 213209.3745 303366.9945 328964.5955 302647.3381 373627.3467 0.30444616 0.330740913 0.36067436 0.376574901 0.486963897 0.570647134 0.811950724 0.880461771 0.810024589 1 18.51124053 -7.049730727 0.846698943 0.938317811 0.31585423 0.969636848 0.042963316 0.093689266 0.138098539 0.031015474 0.021983928 8.92E-08 7.049730727 -0.622463581 down TDSPSCEYS(ph)R ddPTM_A459_MK2206_30min_R2 1 TDSPSCEYSR 10 0 Q9HAV4 Q9HAV4 XPO5 Exportin-5 1 T(0.001)DS(0.262)PS(0.119)CEY(0.013)S(0.605)R 89.561 0.03067 5902100 35014 39930 39027 41577 35462 36856 50437 32198 34807 49582 TRUE FALSE 37694.69876 37947.13426 40328.1407 38180.0261 34069.5837 38258.58091 43814.56131 36406.38915 37834.44994 47964.1434 0.785893296 0.791156301 0.840797684 0.796011841 0.710313607 0.797649623 0.913485746 0.759033448 0.788806956 1 15.54966867 -10.56195686 4.949973546 1.000003525 0.798761581 0.59792324 0.049660207 72834693.19 5.655848666 2926.382698 0.012461191 2.74E-11 10.56195686 -0.201241944 TDSQS(ph)VRHSPIAPSSPSPQVLAQK ddPTM_A459_MK2206_30min_R2 1 TDSQSVRHSPIAPSSPSPQVLAQK 24 1 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 T(0.097)DS(0.117)QS(0.553)VRHS(0.234)PIAPSSPSPQVLAQK 101.58 2.28E-06 6001900 8250.1 17240 12100 21497 21495 21747 21702 14951 19247 18034 TRUE FALSE 8881.733999 16383.88667 12503.40796 19740.62633 20650.9983 22574.59732 18852.50133 16905.14703 20921.06927 17445.55206 0.509111662 0.939144065 0.716710364 1.131556415 1.183740029 1.294003036 1.080648022 0.969023335 1.199220822 1 14.09057163 -5.763638778 24.99393456 1.129249599 0.743404175 0.659150221 0.13178539 34.8206336 395709.2635 0.036420323 0.057131886 1.72E-06 5.763638778 -0.385845424 TDSQSVRHS(ph)PIAPSSPSPQVLAQK ddPTM_A459_MK2206_30min_R2 1 TDSQSVRHSPIAPSSPSPQVLAQK 24 1 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 T(0.002)DS(0.037)QS(0.201)VRHS(0.758)PIAPS(0.002)SPSPQVLAQK 94.707 6.77E-06 7045400 10923 20146 16127 24771 24616 24373 23897 17401 22180 17834 TRUE FALSE 11759.27328 19145.57894 16664.66613 22747.13006 23649.45215 25300.53159 20759.29519 19675.37045 24109.17631 17252.07804 0.68161489 1.109754946 0.965951237 1.31851537 1.370817597 1.466520818 1.203292447 1.140463798 1.397465062 1 14.07448253 -4.406883465 0.907770221 1.278137343 6.54E-12 0.560402608 0.150683582 2.859244388 1.165228545 0.051556649 4.249038406 3.92E-05 4.406883465 -1.278137343 TDSREDEIS(ph)PPPPNPVVK ddPTM_A459_MK2206_30min_R1 7 TDSREDEISPPPPNPVVK 18 1 K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644-2;P10644;K7EMU2;K7EMZ6 K7EIE5 PRKAR1A "cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed" 1 TDS(0.001)REDEIS(0.999)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK 213.01 3.35E-12 1777867000 41257.9 47856.6 43397.2 39094.6 41825.8 35707.7 39019.6 39687.8 35532.2 31928 TRUE FALSE 37748.69895 44741.12664 40451.51898 42105.67287 40159.78982 37729.43912 36416.67368 39340.81375 39225.89934 35883.48168 1.05197983 1.246844636 1.127301953 1.173399873 1.119172052 1.051443097 1.014858982 1.096348846 1.093146415 1 15.13103226 -6.615429541 3.491325905 1.054866067 1.154728324 0.438811808 0.052956199 0.221813697 5.326385147 0.017607366 0.017691093 2.42E-07 6.615429541 0.099862257 TDSREDEIS(ph)PPPPNPVVK ddPTM_A459_MK2206_30min_R2 8 TDSREDEISPPPPNPVVK 18 1 K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644-2;P10644;K7EMU2;K7EMZ6 K7EIE5 PRKAR1A "cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed" 1 TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(0.999)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;T(0.003)DS(0.019)REDEIS(0.978)PPPPNPVVK;T(0.058)DS(0.082)REDEIS(0.861)PPPPNPVVK 169.77 5.11E-08 2015386300 578196 916307 657221 793685 726344 623095 764157 608902 620493 698822 TRUE FALSE 622463.1303 870804.5268 679132.4201 728838.3966 697824.085 646807.3168 663822.268 688487.5821 674462.3595 676019.4954 0.920776893 1.288135228 1.004604785 1.078132216 1.03225438 0.956787964 0.981957285 1.018443383 0.997696611 1 19.36670533 -6.223444241 1.61087057 0.991889817 1.093164215 0.14755182 0.088186826 0.62397223 3.215116363 0.030171576 0.042074404 5.98E-07 6.223444241 0.101274398 TDSS(ph)PNQAVR ddPTM_A459_MK2206_30min_R1 1 TDSSPNQAVR 10 0 A0A0U1RRM4 A0A0U1RRM4 1 T(0.001)DS(0.047)S(0.952)PNQAVR 103.46 0.014196 2675800 2300.9 2057.3 2235.7 1904.7 1949.8 1699.2 2337.8 2106.5 1521.6 1624.3 TRUE FALSE 2105.196372 1923.369396 2083.946913 2051.400324 1872.135337 1795.407236 2181.849628 2088.083093 1679.775765 1825.530547 1.153197012 1.053594748 1.141556857 1.123728292 1.02552945 0.983498873 1.195186589 1.143822598 0.920157577 1 10.83410009 -7.641323787 0.013815338 1.54E-07 2.131591207 0.184534799 0.077139204 1184.185377 14.2926023 1090.45095 1111.477312 2.28E-08 7.641323787 2.131591053 TDST(ph)SDGRPAWMR ddPTM_A459_MK2206_30min_R1 1 TDSTSDGRPAWMR 13 1 Q14204;A0A2R8Y706;A0A2R8Y5T0;A0A2R8Y542;A0A2R8Y6I5 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 TDS(0.11)T(0.84)S(0.05)DGRPAWMR 115.37 0.041629 40349000 4847.6 4955.3 5361.9 3967.8 4325.5 3548.3 3594.9 4560 3734.1 3506 TRUE FALSE 4435.286164 4632.709069 4997.949167 4273.400643 4153.206176 3749.20168 3355.09078 4520.132401 4122.273058 3940.349749 1.12560723 1.175710118 1.268402423 1.084523181 1.054019679 0.951489568 0.851470299 1.147139896 1.04616933 1 11.94410797 -6.106286999 2.572539296 1.002917712 1.187381506 0.50775204 0.079164102 0.247336367 3.19945627 0.02651326 0.037223347 7.83E-07 6.106286999 0.184463794 TDSTESSGTQS(ph)PK ddPTM_A459_MK2206_30min_R2 1 TDSTESSGTQSPK 13 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 TDSTESSGT(0.031)QS(0.969)PK 171.11 1.11E-07 0 14525 6317.4 10926 8374.4 13615 4476.3 12331 21358 12548 16851 TRUE FALSE 15637.04517 6003.687102 11290.26739 7690.184732 13080.40669 4646.648733 10711.92489 24149.56393 13639.40236 16301.15325 0.959260055 0.368298304 0.692605438 0.471757097 0.802422165 0.285050307 0.657126813 1.481463524 0.836713952 1 13.99268641 -7.624026016 8.247434888 1.116891007 0.58425198 0.479195956 0.239622962 0.189262045 13.8006195 0.104347631 0.059979673 2.38E-08 7.624026016 -0.532639026 TDSTESSGTQS(ph)PKR ddPTM_A459_MK2206_30min_R1 2 TDSTESSGTQSPKR 14 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 TDSTES(0.001)S(0.001)GT(0.002)QS(0.996)PKR;TDSTES(0.001)S(0.006)GT(0.013)QS(0.98)PKR 111.43 0.0070629 6002810 2877.23 2250.05 2089.95 2507.54 1474.46 1372.06 2457.88 2034.46 138.85 1506.61 TRUE FALSE 2632.50648 2103.571336 1948.090017 2700.671165 1415.729136 1449.744851 2293.91931 2016.672931 153.2839544 1693.260221 1.554696937 1.242320176 1.150496535 1.594953411 0.836096613 0.856185501 1.354735251 1.191000004 0.090525929 1 10.72558799 -6.600414711 0.470871554 0.762040169 1.467272873 0.303401314 0.344546326 1.719990415 0.786278648 0.321620063 0.528918453 2.51E-07 6.600414711 0.705232704 TDSTESSGTQS(ph)PKR ddPTM_A459_MK2206_30min_R2 3 TDSTESSGTQSPKR 14 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 TDSTESSGTQS(1)PKR;TDSTESSGT(0.026)QS(0.974)PKR;TDSTESS(0.007)GT(0.022)QS(0.97)PKR 178.22 0.00012797 11254000 16960.1 18390.6 16336.9 19872 17913.9 11442.6 19149.6 14894.4 18681.1 17423 TRUE FALSE 18258.5783 17477.34955 16881.56409 18248.39403 17210.51028 11878.05616 16635.23452 16841.14922 20305.94831 16854.48894 1.083306552 1.036955176 1.001606406 1.082702306 1.021123235 0.704741402 0.986991334 0.999208536 1.20477983 1 14.04084526 -6.535645836 24.99995048 0.966623812 1.047256215 0.075067879 0.115168279 606.7107474 1188025.295 0.039855146 0.039878034 2.91E-07 6.535645836 0.080632403 TDSVIIADQTPT(ph)PTR ddPTM_A459_MK2206_30min_R1 1 TDSVIIADQTPTPTR 15 0 K7ELQ4;P17544-2;P17544;P17544-4;P17544-3;P17544-1;K7ESA4;P17544-5 K7ELQ4 ATF7 Cyclic AMP-dependent transcription factor ATF-7 1 TDSVIIADQT(0.001)PT(0.973)PT(0.026)R 108.66 0.0092116 11203000 3191.1 2530.4 2605.8 2416.5 3490.4 2906.6 2661.7 2925.3 2131.6 1892.9 TRUE FALSE 2919.680188 2365.6705 2428.925556 2602.619249 3351.369977 3071.16918 2484.14285 2899.724411 2353.187448 2127.406743 1.372412773 1.111997275 1.141730684 1.223376422 1.575331087 1.443621062 1.167685897 1.363032443 1.106129543 1 11.05488018 -8.450996438 3.961329913 1.001542031 1.294849142 0.349490775 0.137948773 0.250952427 7.427461185 0.144402375 0.037931851 3.54E-09 8.450996438 0.293307111 TDSVKT(ph)PESEGNPLLEQLEK ddPTM_A459_MK2206_30min_R1 1 TDSVKTPESEGNPLLEQLEK 20 1 Q8WYK2;Q8WYK2-2 Q8WYK2 JDP2 Jun dimerization protein 2 1 T(0.019)DS(0.019)VKT(0.928)PES(0.035)EGNPLLEQLEK 89.079 0.0026127 7271800 1978.1 2427.6 2608.7 2161.7 1493.6 1074.6 1534.6 1768.5 2145.1 2331.7 TRUE FALSE 1809.852208 2269.562799 2431.628712 2328.194509 1434.106749 1135.442923 1432.229634 1753.038191 2368.090821 2620.568599 0.690633402 0.866057389 0.927901186 0.888431049 0.547250223 0.43328113 0.546533922 0.668953368 0.903655345 1 11.35566416 -6.250291022 24.77865644 0.647389518 0.850930557 0.155751979 0.170225802 987.6162776 2195102.705 0.051682236 0.06607467 5.62E-07 6.250291022 0.203541039 TDSVKT(ph)PESEGNPLLEQLEK ddPTM_A459_MK2206_30min_R2 2 TDSVKTPESEGNPLLEQLEK 20 1 Q8WYK2;Q8WYK2-2 Q8WYK2 JDP2 Jun dimerization protein 2 1 T(0.004)DS(0.081)VKT(0.909)PES(0.005)EGNPLLEQLEK;T(0.011)DS(0.423)VKT(0.566)PESEGNPLLEQLEK 114.57 0.00038174 12050400 38617 34390 37925 28498 38583 21513.7 42723 29056 23678 40671 TRUE FALSE 41573.54721 32682.24261 39189.40057 26169.62224 37068.03756 22332.41893 37113.41878 32853.71896 25737.46964 39343.9086 1.056670491 0.830681134 0.996072886 0.665150545 0.942154424 0.567620751 0.943307874 0.83503953 0.654166567 1 15.26385267 -1.522912045 0.77815998 0.802946978 52.68301579 0.186120708 0.144512218 702.3259344 2.68833608 0.049212917 64085.94575 0.0299977 1.522912045 51.88006881 TDT(ph)SPVLETAGTVAAMAATPSAR ddPTM_A459_MK2206_30min_R1 1 TDTSPVLETAGTVAAMAATPSAR 23 0 Q8WWH5 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 1 T(0.013)DT(0.9)S(0.087)PVLETAGTVAAMAATPSAR 233.59 5.34E-31 4862900 435.9 539.93 526.29 446.05 626.3 491.14 617.44 648.67 473.82 375.32 TRUE FALSE 398.824416 504.7804589 490.5669011 480.4048483 601.3531448 518.9479224 576.2517042 642.9987466 523.0752846 421.8174751 0.945490501 1.196679817 1.162983826 1.138892712 1.425624068 1.230266532 1.366116243 1.524353031 1.240051244 1 8.720475054 -3.961256731 0.603369024 1.318059992 0.240740602 0.302553014 0.142415311 9.750027972 1.290243329 0.065136371 9.112303309 0.000109331 3.961256731 -1.07731939 TDTAVQATGS(ph)VPSTPIAHR ddPTM_A459_MK2206_30min_R1 1 TDTAVQATGSVPSTPIAHR 19 0 Q9NXR1;Q9NXR1-1;I3L533;I3L2R9;I3L2R3;I3L522 Q9NXR1 NDE1 Nuclear distribution protein nudE homolog 1 1 TDTAVQATGS(1)VPSTPIAHR 167.36 3.90E-09 10056000 2583.2 1872.1 1632.6 1387.5 1885.4 1749.8 1752.1 1608.4 1568.3 1510.6 TRUE FALSE 2363.485275 1750.22595 1521.783661 1494.36549 1810.300526 1848.872164 1635.220606 1594.337928 1731.330397 1697.744532 1.392132462 1.030912435 0.896356096 0.880206334 1.066297367 1.089016709 0.963172359 0.939091776 1.019782638 1 10.72940367 -4.76871918 4.217639644 0.981012559 1.42941697 0.787775273 0.063487061 0.104131784 3.733386405 0.017379408 0.143423406 1.70E-05 4.76871918 0.448404412 TDTAVQATGS(ph)VPSTPIAHR ddPTM_A459_MK2206_30min_R2 2 TDTAVQATGSVPSTPIAHR 19 0 Q9NXR1;Q9NXR1-1;I3L533;I3L2R9;I3L2R3;I3L522 Q9NXR1 NDE1 Nuclear distribution protein nudE homolog 1 1 TDTAVQAT(0.006)GS(0.994)VPSTPIAHR;TDTAVQAT(0.001)GS(0.999)VPSTPIAHR 134.8 0.00013173 22448000 80957 110591 92365 104506 102354 93750 86260 73749 73830 92471 TRUE FALSE 87155.13017 105099.2118 95444.403 95967.5255 98335.06767 97317.72194 74933.95838 83388.24752 80251.59995 89453.67884 0.974304593 1.174900944 1.066970126 1.072818097 1.09928478 1.087911903 0.837684479 0.932194725 0.897130235 1 16.44885319 -7.246605799 24.88684822 0.911101922 1.083752069 0.644445343 0.059059064 417.6284664 700671.7424 0.02114528 0.01630887 5.67E-08 7.246605799 0.172650147 TDTESELDLISR ddPTM_A459_MK2206_30min_R2 2 TDTESELDLISR 12 0 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586;A0A494C1T2 V9GZ78 MTHFD1 "C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed" 0 ; 166.86 0.0062737 5407100 22973 28814 21040 27044 29510 26846 26544 18759.2 22595.9 22808 FALSE TRUE 24731.83054 27383.13866 21741.4631 24834.41869 28351.28912 27867.64334 23058.74091 21211.09185 24561.25054 22063.77683 1.120924615 1.241090266 0.985391725 1.125574233 1.284969901 1.263049548 1.045094913 0.961353626 1.113193391 1 14.42939215 -7.414705569 7.318526607 1.023206464 1.167894759 0.37850224 0.088269244 0.305285724 18.2330986 0.039427333 0.026422024 3.85E-08 7.414705569 0.144688295 TDTGIVT(ph)VEQSPSSSK ddPTM_A459_MK2206_30min_R1 1 TDTGIVTVEQSPSSSK 16 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 T(0.001)DT(0.002)GIVT(0.923)VEQS(0.073)PS(0.001)SSK 239.33 4.99E-21 24294000 5925.6 5949.9 5554.8 4446.9 4546.4 4494.8 5135 4316.7 4610.6 4065.1 TRUE FALSE 5421.596603 5562.560429 5177.755653 4789.401009 4365.307261 4749.291692 4792.453519 4278.959547 5089.888369 4568.715278 1.18667859 1.21753274 1.133306704 1.048303673 0.955478071 1.03952455 1.048971807 0.936578291 1.114074321 1 12.15757282 -5.6604949 2.441478887 1.014588962 1.200783421 0.715387047 0.047402781 0.140697258 1.693836937 0.013149518 0.026511074 2.19E-06 5.6604949 0.18619446 TDTGIVTVEQS(ph)PSSSK ddPTM_A459_MK2206_30min_R1 3 TDTGIVTVEQSPSSSK 16 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 T(0.001)DTGIVTVEQS(0.861)PS(0.116)S(0.011)S(0.011)K;TDTGIVTVEQS(0.986)PS(0.009)S(0.003)S(0.003)K;TDTGIVTVEQS(0.843)PS(0.105)S(0.047)S(0.004)K 208.38 6.33E-08 35068400 17301.8 15449.8 15061.8 12948.1 13335.7 12349.3 12989.3 12662.1 12708 11638.2 TRUE FALSE 15830.19105 14444.01521 14039.44698 13945.36491 12804.51083 13048.50669 12122.8075 12551.39659 14029.04208 13080.02808 1.210256657 1.104280138 1.073349911 1.066157108 0.978936035 0.997590113 0.926818155 0.959584836 1.072554431 1 13.67507802 -4.738416209 0.664540648 0.982342417 1.350221114 0.751108666 0.039399255 1.700203794 0.545909695 0.018495481 0.482435919 1.83E-05 4.738416209 0.367878696 TDTGIVTVEQS(ph)PSSSK ddPTM_A459_MK2206_30min_R2 4 TDTGIVTVEQSPSSSK 16 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TDTGIVTVEQS(0.889)PS(0.083)S(0.008)S(0.019)K;TDTGIVT(0.004)VEQS(0.992)PS(0.004)SSK;TDTGIVTVEQS(0.874)PS(0.122)S(0.001)S(0.003)K;TDTGIVTVEQS(0.87)PS(0.109)S(0.01)S(0.01)K 261.66 3.42E-39 52137800 229274 255592 226801 262202 254982 211161 263123 190551 193594 243176 TRUE FALSE 246827.3937 242899.6729 234362.4321 240779.2579 244970.1255 219196.8798 228574.634 215456.67 210432.4562 235241.187 1.049252458 1.032555889 0.996264451 1.023542097 1.041357292 0.931796352 0.971660775 0.915896883 0.89453917 1 17.84378115 -6.764263318 24.99830861 0.939327313 1.026737727 0.669965242 0.030052684 44.64530783 395209.4818 0.010382047 0.009558357 1.72E-07 6.764263318 0.087410415 TDTGIVTVEQSPS(ph)SSK ddPTM_A459_MK2206_30min_R2 1 TDTGIVTVEQSPSSSK 16 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TDT(0.004)GIVT(0.213)VEQS(0.032)PS(0.684)S(0.023)S(0.044)K 142.35 0.00056915 0 17818 23590 20348 19027 23391 22039 20180 17528 18957 21971 TRUE FALSE 19182.15978 22418.5549 21026.39216 17472.43324 22472.55181 22877.70959 17530.34176 19818.96978 20605.84559 21254.08807 0.902516246 1.054787899 0.98928696 0.822074002 1.057328441 1.076391022 0.824798585 0.932478012 0.969500339 1 14.37545274 -8.547374298 19.85544665 1.000000008 0.959550901 0.021387633 0.086145434 2106.601754 1707561.696 0.084511775 0.021820847 2.84E-09 8.547374298 -0.040449107 TDTPPSSVPTSVISTPSTEEIQSETPGDAQGS(ph)PPELKRPR ddPTM_A459_MK2206_30min_R1 1 TDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPPELKRPR 40 2 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 TDTPPSSVPT(0.003)S(0.003)VIS(0.009)T(0.009)PS(0.136)T(0.136)EEIQS(0.136)ET(0.136)PGDAQGS(0.431)PPELKRPR 45.671 0.0028906 6562100 1508.8 1331.3 1243.1 1981.2 1727.4 1156.9 1080.3 1996 524.59 245.86 TRUE FALSE 1380.468637 1244.632128 1158.721835 2133.792367 1658.594 1222.402678 1008.235158 1978.549182 579.1230078 276.3189929 4.995923813 4.504330718 4.193420883 7.722206659 6.002461078 4.423882214 3.648808746 7.160380694 2.095849444 1 8.11019092 -8.430550665 5.407602724 1.025848494 5.272330057 0.603635775 1.239510801 0.140335303 5.880305936 1.226674585 0.318718061 3.71E-09 8.430550665 4.246481562 TDTS(ph)PVLETAGTVAAMAATPSAR ddPTM_A459_MK2206_30min_R1 2 TDTSPVLETAGTVAAMAATPSAR 23 0 Q8WWH5 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 1 T(0.002)DT(0.036)S(0.852)PVLET(0.091)AGT(0.019)VAAMAATPSAR;TDT(0.038)S(0.962)PVLETAGTVAAMAATPSAR 176.48 1.57E-16 16132600 2007.6 2194.9 1812.44 1785.02 1865.14 1752.55 1892.88 1841.08 1697.92 1586.79 TRUE FALSE 1836.843078 2052.011611 1689.416623 1922.50255 1790.847524 1851.777866 1766.609429 1824.983632 1874.42486 1783.373525 1.029982251 1.150634784 0.947315074 1.078014517 1.004190933 1.03835671 0.990599784 1.023332244 1.051055673 1 10.80039319 -5.255834951 24.99940344 1.019038893 1.090308508 0.316000422 0.04325432 517.0289153 2306268.381 0.010138056 0.025336664 5.55E-06 5.255834951 0.071269615 TDTS(ph)PVLETAGTVAAMAATPSAR ddPTM_A459_MK2206_30min_R2 2 TDTSPVLETAGTVAAMAATPSAR 23 0 Q8WWH5 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 1 T(0.006)DT(0.128)S(0.866)PVLETAGTVAAMAATPSAR;T(0.148)DT(0.148)S(0.704)PVLETAGTVAAMAATPSAR 157 1.87E-09 11102700 18366.2 23355.6 20547.7 21166.1 21002 20328.5 25754 19537.6 21187 19616.8 TRUE FALSE 19772.33039 22195.79487 21232.75006 19436.76192 20177.35595 21102.11531 22372.46886 22091.2314 23029.80696 18976.70542 1.041926401 1.169633736 1.118884948 1.024243223 1.063269704 1.112000995 1.178943782 1.164123641 1.213582993 1 14.21194192 -7.039924395 5.71688555 1.152334968 1.086963776 0.126569772 0.064954776 0.352126395 30.55263111 0.024337302 0.019273763 9.12E-08 7.039924395 -0.065371192 TDVKDDLSDPPVAS(ph)SCISEKSPR ddPTM_A459_MK2206_30min_R2 3 TDVKDDLSDPPVASSCISEKSPR 23 2 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 TDVKDDLSDPPVAS(0.605)S(0.132)CIS(0.132)EKS(0.132)PR;TDVKDDLS(0.001)DPPVAS(0.951)S(0.023)CIS(0.023)EKS(0.002)PR;TDVKDDLSDPPVAS(0.746)S(0.072)CIS(0.072)EKS(0.11)PR 83.453 0.00040287 15682300 114759 87588.3 99901 85525 90472 62341.9 109952 72971.9 61201.5 104467 TRUE FALSE 123545.0373 83238.79239 103231.6495 78537.33392 86919.61469 64714.36469 95515.17032 82509.57788 66524.69584 101058.2503 1.222513123 0.823671418 1.0215064 0.777149156 0.860094197 0.640366961 0.945149654 0.816455634 0.658280701 1 16.62482758 -1.718674696 0.969507823 0.815855362 200 0.450739937 0.124152969 779.1035786 1.90161649 0.037606734 343466.9356 0.019112844 1.718674696 199.1841446 TDVSNFDEEFTGEAPT(ph)LSPPR ddPTM_A459_MK2206_30min_R1 1 TDVSNFDEEFTGEAPTLSPPR 21 0 Q16512;Q16512-2 Q16512 PKN1 Serine/threonine-protein kinase N1 1 TDVSNFDEEFTGEAPT(0.831)LS(0.169)PPR 74.392 0.004395 9627800 382.6 504.56 594.24 396.46 496.46 327.2 477.77 477.78 544.49 401.52 TRUE FALSE 350.0578609 471.7130523 553.9046444 426.9954179 476.6849469 345.7257812 445.898835 473.6028198 601.091684 451.2633289 0.775728579 1.045316608 1.227453261 0.946222284 1.056334332 0.766128686 0.988112276 1.049504335 1.332019789 1 8.817825735 -8.024856995 10.52497235 1.174409282 0.981915429 0.21405235 0.146797928 0.966987533 400.0721983 0.09497125 0.037718568 9.44E-09 8.024856995 -0.192493853 TDVSNFDEEFTGEAPT(ph)LSPPRDAR ddPTM_A459_MK2206_30min_R1 2 TDVSNFDEEFTGEAPTLSPPRDAR 24 1 Q16512;Q16512-2 Q16512 PKN1 Serine/threonine-protein kinase N1 1 TDVSNFDEEFT(0.002)GEAPT(0.635)LS(0.363)PPRDAR;TDVSNFDEEFT(0.002)GEAPT(0.499)LS(0.499)PPRDAR 73.975 0.00070184 33008000 1250.23 1219.47 1308.11 1127.14 1351.76 931.08 757.21 1246.67 622.09 510.04 TRUE FALSE 1143.891373 1140.082281 1219.319138 1213.952518 1297.916537 983.796945 706.6979025 1235.770496 686.7584817 573.2276058 1.995527364 1.988882374 2.127111684 2.117749574 2.264225455 1.716241393 1.232839967 2.155811205 1.198055493 1 9.162964279 -8.129648611 0.488636718 0.985370359 2.119528872 0.602476574 0.278480327 0.653894475 0.400641717 0.310271474 0.182893152 7.42E-09 8.129648611 1.134158513 TDVSNFDEEFTGEAPT(ph)LSPPRDAR ddPTM_A459_MK2206_30min_R2 1 TDVSNFDEEFTGEAPTLSPPRDAR 24 1 Q16512;Q16512-2 Q16512 PKN1 Serine/threonine-protein kinase N1 1 TDVSNFDEEFTGEAPT(0.5)LS(0.5)PPRDAR 67.758 0.0030436 5796200 6925.3 10100 6200.7 8688.7 10546 11990 11088 6171.6 10020 8365.5 TRUE FALSE 7455.506293 9598.448687 6407.428243 7978.805416 10131.91105 12446.28785 9632.132281 6978.24931 10891.52149 8092.53442 0.921282 1.186086853 0.79177028 0.985946429 1.252007162 1.537996282 1.190249158 0.862307029 1.345872742 1 12.98237588 -6.251377692 21.18088027 1.207792453 0.973793665 0.247269389 0.193392712 134.3778232 282874.6398 0.059643103 0.075751898 5.61E-07 6.251377692 -0.233998788 TDVSNFDEEFTGEAPTLS(ph)PPR ddPTM_A459_MK2206_30min_R1 3 TDVSNFDEEFTGEAPTLSPPR 21 0 Q16512;Q16512-2 Q16512 PKN1 Serine/threonine-protein kinase N1 1 TDVSNFDEEFTGEAPT(0.032)LS(0.968)PPR;TDVSNFDEEFTGEAPT(0.024)LS(0.976)PPR;TDVSNFDEEFTGEAPT(0.09)LS(0.91)PPR 211.66 4.12E-18 29108100 5487.7 5148.4 5412.9 4279.3 4617.5 4932.6 5863.3 4929.9 5406.8 5021 TRUE FALSE 5020.942298 4813.238224 5045.487429 4608.892427 4433.575197 5211.879549 5472.169955 4886.798404 5968.856208 5643.039387 0.889758507 0.852951379 0.894108136 0.816739369 0.785671496 0.923594395 0.969720319 0.865986939 1.057737825 1 12.4622567 -7.70140962 0.938029971 1.011430632 0.852825019 0.551478637 0.053365856 0.457427616 0.733109711 0.047661962 0.020479685 1.99E-08 7.70140962 -0.158605613 TDVSNFDEEFTGEAPTLS(ph)PPR ddPTM_A459_MK2206_30min_R2 2 TDVSNFDEEFTGEAPTLSPPR 21 0 Q16512;Q16512-2 Q16512 PKN1 Serine/threonine-protein kinase N1 1 TDVSNFDEEFTGEAPT(0.015)LS(0.985)PPR;TDVSNFDEEFTGEAPT(0.083)LS(0.917)PPR 179.71 2.01E-14 8153800 53914 64309 50349 63912 61114 53335 62944 47610 47339 57130 TRUE FALSE 58041.69729 61115.50857 52027.61053 58690.18516 58714.35729 55364.7008 54679.37719 53832.79047 51456.46065 55265.85278 1.050227118 1.105845753 0.941406093 1.061961088 1.062398467 1.001788591 0.989388102 0.974069661 0.931071504 1 15.75410073 -7.16232659 1.848286369 0.966781942 1.042751916 0.37918686 0.042456455 0.387628855 2.601876793 0.021333419 0.014441415 6.88E-08 7.16232659 0.075969974 TDVSNFDEEFTGEAPTLS(ph)PPRDAR ddPTM_A459_MK2206_30min_R1 2 TDVSNFDEEFTGEAPTLSPPRDAR 24 1 Q16512;Q16512-2 Q16512 PKN1 Serine/threonine-protein kinase N1 1 TDVSNFDEEFTGEAPT(0.345)LS(0.655)PPRDAR;TDVSNFDEEFTGEAPT(0.379)LS(0.621)PPRDAR 170.06 3.43E-16 32827000 3664.1 3132 3085.8 3544.6 3981.5 2896.1 2496.6 3967.2 1555.93 647.27 TRUE FALSE 3352.449054 2928.106231 2876.344494 3817.605706 3822.908424 3060.074679 2330.056369 3932.515189 1717.674491 727.4586942 4.60843905 4.025116826 3.953962632 5.247865943 5.255155316 4.206527056 3.203008484 5.40582609 2.361198656 1 9.506721523 -8.473850866 4.258178133 1.012067742 4.4456194 0.756527666 0.658162812 0.089683783 3.513124398 0.649795856 0.170006223 3.36E-09 8.473850866 3.433551658 TDYNAS(ph)VSVPDSSGPER ddPTM_A459_MK2206_30min_R1 1 TDYNASVSVPDSSGPER 17 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 TDYNAS(0.932)VS(0.068)VPDSSGPER 191.4 7.88E-08 5254200 1307.3 1531.5 1165.7 1051.5 1384.7 1124.3 1375.5 1296.8 1145.9 833.98 TRUE FALSE 1196.10727 1431.799072 1086.575532 1132.486712 1329.544467 1187.956894 1283.742905 1285.462214 1265.020406 937.2997386 1.27612035 1.527578652 1.159261533 1.208243922 1.41848377 1.267424758 1.369618332 1.371452654 1.3496434 1 9.87236667 -10.63867247 4.574673849 0.999970848 1.328398404 0.488015067 0.100641645 3.02E-05 5.84E-06 0.096805667 0.023476708 2.30E-11 10.63867247 0.328427556 TDYNAS(ph)VSVPDSSGPER ddPTM_A459_MK2206_30min_R2 1 TDYNASVSVPDSSGPER 17 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 TDYNAS(0.78)VS(0.216)VPDS(0.001)S(0.002)GPER 169.58 9.93E-07 5814000 17722 23227 15158 23590 22439 18697 23546 21345 18097 18709 TRUE FALSE 19078.80995 22073.58096 15663.36015 21662.62154 21557.93211 19408.52744 20454.38192 24134.86479 19671.04435 18098.52686 1.054163695 1.219634124 0.865449452 1.196927336 1.191142919 1.072381613 1.130168332 1.333526478 1.086886491 1 14.14358465 TDYNASVS(ph)VPDSSGPER ddPTM_A459_MK2206_30min_R1 2 TDYNASVSVPDSSGPER 17 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 TDYNAS(0.191)VS(0.809)VPDSSGPER;T(0.001)DYNAS(0.273)VS(0.356)VPDS(0.356)S(0.013)GPER 219.95 6.62E-12 3550000 1772.73 2064.45 2255.05 1833.04 2143.76 2077.85 2381.12 1919.16 1795.93 1383.62 TRUE FALSE 1621.950005 1930.05393 2101.983489 1974.221058 2058.3695 2195.496071 2222.279829 1902.380986 1982.62335 1555.033291 1.043032335 1.241165665 1.351728931 1.269568355 1.32368195 1.411864353 1.429088266 1.223369941 1.274971643 1 10.60272975 -4.793662203 3.110691238 1.303909556 1.006890468 0.274664624 0.114488453 0.401838104 5.899756851 0.027886129 0.292699307 1.61E-05 4.793662203 -0.297019088 TDYNASVSVPDS(ph)SGPER ddPTM_A459_MK2206_30min_R1 1 TDYNASVSVPDSSGPER 17 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 TDYNAS(0.248)VS(0.198)VPDS(0.549)S(0.005)GPER 222.09 4.30E-12 4464500 2083.7 2324.9 2131.1 1570.2 2401.3 2151.2 2274.8 1909.3 1717.9 1602.9 TRUE FALSE 1906.470373 2173.548587 1986.44687 1691.137076 2305.651136 2272.999085 2123.052243 1892.607191 1896.481853 1801.479353 1.058280446 1.206535386 1.102675346 0.938749075 1.279865424 1.261740292 1.178504899 1.050585003 1.052735825 1 10.8149664 -10.89932291 6.223700892 0.999982943 1.129637368 0.120126052 0.101361342 2.53E-05 2.54E-06 0.103548896 0.025110994 1.26E-11 10.89932291 0.129654425 TDYNASVSVPDS(ph)SGPER ddPTM_A459_MK2206_30min_R2 1 TDYNASVSVPDSSGPER 17 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 TDYNAS(0.005)VS(0.01)VPDS(0.656)S(0.328)GPER 145.33 0.00047879 7305100 10261 11040 9740.3 11216 11231 8787.3 16559 12572 8979.2 10860 TRUE FALSE 11046.59005 10491.76965 10065.03674 10299.61692 10790.01451 9121.706859 14384.78341 14215.20357 9760.194585 10505.63909 1.051491485 0.99867981 0.958060395 0.980389373 1.027068836 0.868267678 1.369244011 1.353102219 0.929043393 1 13.35887631 -7.25070173 24.9414124 1.192272598 0.982548692 0.292672756 0.135684674 769.0098397 1786258.118 0.0514204 0.039413262 5.61E-08 7.25070173 -0.209723906 TDYNASVSVPDSSGPER ddPTM_A459_MK2206_30min_R1 2 TDYNASVSVPDSSGPER 17 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 235.93 1.17E-16 16113200 2180.86 1948 2223.48 2207.45 2416.93 2009.17 2303.11 1961.36 1892.86 2127.07 FALSE TRUE 1995.366405 1821.184846 2072.556373 2377.468181 2320.65856 2122.927469 2149.473734 1944.212036 2089.629571 2390.58749 0.834676168 0.761814765 0.866965288 0.994512098 0.970748224 0.888035881 0.899140376 0.813277926 0.87410713 1 11.22314949 -5.516951666 24.05922147 0.913544031 0.802281575 0.418249661 0.05697056 162.4926548 659588.1989 0.016493058 0.029877495 3.04E-06 5.516951666 -0.111262455 TDYNASVSVPDSSGPER ddPTM_A459_MK2206_30min_R2 2 TDYNASVSVPDSSGPER 17 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 208.39 2.82E-13 5901600 12139.7 18301.2 16532.8 18238.6 14409.4 13435.7 16296.3 11410 13602 16539.3 FALSE TRUE 13069.12477 17392.38902 17083.9953 16748.44804 13843.61455 13947.00498 14156.57623 12901.32618 14785.07737 15999.624 0.816839494 1.08704986 1.067774799 1.046802603 0.865246243 0.871708297 0.884806808 0.806351836 0.924089052 1 13.96575038 -6.265629108 24.95678983 0.880973678 1.015016068 0.294143349 0.083784966 378.0622128 2251985.3 0.025098267 0.029469463 5.42E-07 6.265629108 0.13404239 TEAACLSAPHLAS(ph)PPATPK ddPTM_A459_MK2206_30min_R2 2 TEAACLSAPHLASPPATPK 19 0 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 TEAACLSAPHLAS(0.999)PPAT(0.001)PK;TEAACLSAPHLAS(1)PPATPK 104.45 0.00060044 31780000 179594 171880 147121 178341 182262 121635 170331 110368 108681 146383 TRUE FALSE 193343.8547 163344.6891 152025.9407 163769.9698 175105.4781 126263.9052 147966.3351 124793.4766 118133.8769 141606.5347 1.365359693 1.153510955 1.07357998 1.156514211 1.236563542 0.891653097 1.044911772 0.881269193 0.834240293 1 17.11152832 -6.763141116 24.99999771 0.930150224 1.185566144 0.68766449 0.089698527 28.75292369 422400.9012 0.031735209 0.029446335 1.73E-07 6.763141116 0.255415919 TEAASDPQHPAASEGAAAAAAS(ph)PPLLR ddPTM_A459_MK2206_30min_R2 1 TEAASDPQHPAASEGAAAAAASPPLLR 27 0 K7ERT7;Q99536-3;Q99536 K7ERT7 VAT1 Synaptic vesicle membrane protein VAT-1 homolog 1 TEAASDPQHPAASEGAAAAAAS(1)PPLLR 90.742 1.78E-05 4453800 16308 17380 12727 18288 18272 13981 17436 14347 12113 15354 TRUE FALSE 17556.55302 16516.93447 13151.31183 16793.8119 17554.54947 14513.05675 15146.63226 16222.20216 13166.56684 14853.00024 1.182020652 1.11202681 0.885431335 1.130667988 1.18188576 0.977112807 1.019769206 1.092183525 0.886458401 1 13.85846676 -7.675589461 0.944111638 0.967222172 1.082394922 0.189174231 0.094186119 1.121768939 1.821666121 0.08481706 0.036851863 2.11E-08 7.675589461 0.11517275 TEADVLAENQVLDSSAPKS(ph)PSQDVK ddPTM_A459_MK2206_30min_R1 1 TEADVLAENQVLDSSAPKSPSQDVK 25 1 Q9UHK0 Q9UHK0 NUFIP1 Nuclear fragile X mental retardation-interacting protein 1 1 TEADVLAENQVLDS(0.001)S(0.001)APKS(0.824)PS(0.175)QDVK 82.726 7.90E-05 3928600 968.47 1389.2 1191.5 825.31 534.64 545.85 1080.9 830.96 1136.4 1146.7 TRUE FALSE 886.0965409 1298.762828 1110.6243 888.8755192 513.3441567 576.7555553 1008.795133 823.6950043 1254.532847 1288.761853 0.687556463 1.007760142 0.861776206 0.689712779 0.398323519 0.447526868 0.78276303 0.639136705 0.973440394 1 10.33176998 -10.27602682 14.69715913 0.999999993 0.714440811 0.163166157 0.189121867 0 0 0.200009481 0.048509424 5.30E-11 10.27602682 -0.285559182 TEAELSQDLET(ph)SPTAKPQIK ddPTM_A459_MK2206_30min_R1 2 TEAELSQDLETSPTAKPQIK 20 1 Q5VT06;H0Y7F7 Q5VT06 CEP350 Centrosome-associated protein 350 1 TEAELSQDLET(0.513)S(0.354)PT(0.134)AKPQIK;TEAELS(0.002)QDLET(0.891)S(0.107)PT(0.001)AKPQIK 110.26 0.00052598 16171400 5453.5 6109.5 6015 5194.9 4783.6 4094.4 5178 4859.2 5261 4896.3 TRUE FALSE 4989.651188 5711.77044 5606.718559 5595.012098 4593.059083 4326.22139 4832.585068 4816.716527 5807.899777 5502.890609 0.90673276 1.037958201 1.018867893 1.016740563 0.834662981 0.786172522 0.878190284 0.87530661 1.055427082 1 12.42597393 -4.457428833 22.50438452 0.937194414 0.000611026 0.009487722 0.090391863 1049.792391 1325908.016 0.024038735 131763.9035 3.49E-05 4.457428833 -0.936583388 TEAELSQDLET(ph)SPTAKPQIK ddPTM_A459_MK2206_30min_R2 2 TEAELSQDLETSPTAKPQIK 20 1 Q5VT06;H0Y7F7 Q5VT06 CEP350 Centrosome-associated protein 350 1 TEAELS(0.004)QDLET(0.494)S(0.457)PT(0.045)AKPQIK;TEAELSQDLET(0.837)S(0.162)PTAKPQIK 99.923 0.0010933 13950500 46081 59205 48404 48659 52440 38271 61670 40817 39982 59035 TRUE FALSE 49608.99679 56264.96579 50017.7652 44683.40405 50380.94211 39727.42972 53572.65492 46151.92205 43459.56209 57108.69278 0.868676805 0.985225945 0.875834532 0.782427366 0.88219393 0.69564593 0.938082318 0.808141805 0.760997319 1 15.80142274 -5.520459475 23.40044281 0.830184288 0.927846108 0.137772564 0.086966555 62.4313119 603863.5302 0.021915653 0.038900083 3.02E-06 5.520459475 0.09766182 TEAELSQDLETS(ph)PTAKPQIK ddPTM_A459_MK2206_30min_R2 2 TEAELSQDLETSPTAKPQIK 20 1 Q5VT06;H0Y7F7 Q5VT06 CEP350 Centrosome-associated protein 350 1 TEAELS(0.001)QDLET(0.343)S(0.654)PT(0.002)AKPQIK;TEAELS(0.001)QDLET(0.432)S(0.557)PT(0.01)AKPQIK 78.531 0.0026691 8295200 36949 36912 37271 36926 38971 29445 36734 28537 26794 41989 TRUE FALSE 39777.84385 35079.00376 38513.59654 33909.02768 37440.80273 30565.55011 31910.78167 32266.88388 29124.49369 40618.90237 0.979293913 0.863612794 0.948169308 0.834809059 0.921758111 0.752495718 0.785614081 0.79438099 0.717018235 1 15.30986363 -6.752938602 24.99690317 0.795532632 0.904973388 0.269352267 0.080142495 220.2743582 647725.3809 0.024803802 0.024419287 1.77E-07 6.752938602 0.109440756 TEAFTS(ph)PEALQPGGTALAPK ddPTM_A459_MK2206_30min_R2 2 TEAFTSPEALQPGGTALAPK 20 0 Q7Z5J4-3;Q7Z5J4 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 TEAFT(0.252)S(0.748)PEALQPGGTALAPK;T(0.009)EAFT(0.176)S(0.815)PEALQPGGTALAPK 133.78 0.00025669 2839300 39328 37291 38152 38291 41143 32188 45206 30800.8 28333.6 41429 TRUE FALSE 42338.98192 35439.18317 39423.96864 35162.50281 39527.51909 33412.9369 39270.3979 34826.57031 30798.00531 40077.17512 1.056436283 0.884273481 0.983701284 0.877369792 0.986285061 0.833714871 0.979869409 0.868987652 0.768467469 1 15.2904932 TEAPAPASSTPQEPWPGPT(ph)APSPTSRPPWAVDPAFAER ddPTM_A459_MK2206_30min_R1 1 TEAPAPASSTPQEPWPGPTAPSPTSRPPWAVDPAFAER 38 1 Q9NR12-2;Q9NR12 Q9NR12-2 PDLIM7 PDZ and LIM domain protein 7 1 TEAPAPASSTPQEPWPGPT(0.757)APS(0.222)PT(0.011)S(0.011)RPPWAVDPAFAER 107.19 9.62E-19 8810100 1323.7 1078.5 1199.8 916.23 1134.1 975.87 911.38 1083.8 807.81 844.04 TRUE FALSE 1211.112364 1008.289454 1118.360919 986.7981934 1088.926396 1031.122916 850.5835031 1074.324451 891.7847403 948.6060474 1.276728487 1.062916958 1.178951918 1.040261335 1.147922679 1.0869875 0.896666752 1.132529625 0.940100206 1 9.889665255 -1.522878745 0.241995132 0.983345094 2.423050376 0.448229157 0.080427406 48.60179021 0.651766768 0.104268121 28.17726205 0.03 1.522878745 1.439705282 TEAPGT(ph)PEGPEPERPSPGDGNPR ddPTM_A459_MK2206_30min_R1 2 TEAPGTPEGPEPERPSPGDGNPR 23 1 A0A0G2JNW7;Q9Y666-2;Q9Y666 A0A0G2JNW7 SLC12A7 Solute carrier family 12 member 7 1 T(0.005)EAPGT(0.947)PEGPEPERPS(0.048)PGDGNPR;T(0.006)EAPGT(0.948)PEGPEPERPS(0.046)PGDGNPR 60.218 0.01559 26322000 3323.7 2883.8 2855.6 1875.99 3840.1 3104.2 4226.8 3742.6 4048.3 4780.9 TRUE FALSE 3041.001862 2696.064096 2661.769828 2020.479075 3687.140685 3279.957121 3944.837884 3709.878843 4469.135272 5373.193986 0.565957952 0.501761913 0.49537944 0.376029431 0.686210231 0.610429687 0.73417001 0.690442008 0.831746496 1 12.39156421 -7.932672985 0.462973194 1.004115153 0.475415185 0.827093826 0.071434868 0.37727042 0.207245815 0.080459546 0.054785299 1.17E-08 7.932672985 -0.528699968 TEAPGT(ph)PEGPEPERPSPGDGNPR ddPTM_A459_MK2206_30min_R2 1 TEAPGTPEGPEPERPSPGDGNPR 23 1 A0A0G2JNW7;Q9Y666-2;Q9Y666 A0A0G2JNW7 SLC12A7 Solute carrier family 12 member 7 1 T(0.069)EAPGT(0.926)PEGPEPERPS(0.006)PGDGNPR 69.639 0.0037864 11732000 48496 26058 27681 41624 32646 33332 46861 22408 50407 36032 TRUE FALSE 52208.89105 24763.99761 28603.87072 38223.18605 31364.15401 34600.47262 40708.09441 25336.80254 54791.30975 34856.27879 1.497833184 0.710460166 0.820623191 1.096593996 0.899813609 0.992661116 1.167884118 0.726893501 1.571920803 1 15.08913094 -8.257784109 24.99778452 1.285960385 0.980877501 0.177885284 0.254789485 471.4092845 3223948.597 0.17501997 0.060390233 5.52E-09 8.257784109 -0.305082883 TEAQDLCRAS(ph)PEPPGPESSSR ddPTM_A459_MK2206_30min_R1 3 TEAQDLCRASPEPPGPESSSR 21 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 TEAQDLCRAS(1)PEPPGPESSSR;TEAQDLCRAS(1)PEPPGPESSSR;TEAQDLCRAS(1)PEPPGPESSSR 122.68 3.98E-05 215699000 10489 10182.6 9979.1 11001.9 14111.3 9353.4 8345 11316.3 4086.5 2603.91 TRUE FALSE 9596.85547 9519.710889 9301.746495 11849.26824 13549.21704 9882.981425 7788.320276 11217.36278 4511.306299 2926.502029 3.279292266 3.252931587 3.178452091 4.048952683 4.629833468 3.377062898 2.66130698 3.833027509 1.541535339 1 11.51496156 -8.354322016 4.036889014 1.039885194 3.532755639 0.755279029 0.517516824 0.116538733 3.217183243 0.535549116 0.142417177 4.42E-09 8.354322016 2.492870445 TEAQDLCRAS(ph)PEPPGPESSSR ddPTM_A459_MK2206_30min_R2 2 TEAQDLCRASPEPPGPESSSR 21 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 T(0.001)EAQDLCRAS(0.999)PEPPGPESSSR;T(0.002)EAQDLCRAS(0.995)PEPPGPES(0.001)S(0.001)S(0.001)R 118.08 4.15E-05 240100000 39007 156549 107112 190273 183359 217840 154766 121033 173027 100007 TRUE FALSE 41993.40591 148775.0043 110683.0606 174727.0872 176159.4044 226130.0538 134445.0383 136852.4287 188076.5757 96743.77978 0.434068278 1.537825012 1.144084518 1.806080842 1.820886105 2.337411815 1.389702145 1.414586333 1.944068922 1 16.56188128 -4.699179172 1.435773004 1.678142755 2.66E-28 0.438561248 0.383967703 1.414722971 2.319525512 0.109402479 3.625120331 2.00E-05 4.699179172 -1.678142755 TEARSS(ph)DEENGPPS(ph)SPDLDR ddPTM_A459_MK2206_30min_R2 2 TEARSSDEENGPPSSPDLDR 20 1 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 T(0.024)EARS(0.059)S(0.918)DEENGPPS(0.562)S(0.438)PDLDR;T(0.011)EARS(0.123)S(0.866)DEENGPPS(0.573)S(0.427)PDLDR 150.73 2.60E-05 7914400 22833 27506 27275 36996 39643 38542 36053 26941 36626 26582 TRUE FALSE 24581.11204 26140.09204 28184.33489 33973.30846 38086.41663 40008.74282 31319.19779 30462.2812 39811.66328 25714.63152 0.95591928 1.016545464 1.096042728 1.321166451 1.481118507 1.555874631 1.217952424 1.184628338 1.548210529 1 14.65030186 -5.65994383 2.800181886 1.351213494 0.993589548 0.430858879 0.163893026 0.239479361 3.768699168 0.046906323 0.090513226 2.19E-06 5.65994383 -0.357623946 TEATQGLDYVPSAGT(ph)ISPTSSLEEDKGFK ddPTM_A459_MK2206_30min_R2 1 TEATQGLDYVPSAGTISPTSSLEEDKGFK 29 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 TEATQGLDY(0.008)VPS(0.136)AGT(0.324)IS(0.324)PT(0.102)S(0.102)S(0.002)LEEDKGFK 73.212 0.00017995 6059300 17684 22381 22078 22766 22682 16233 23312 17921 21304 20694 TRUE FALSE 19037.90064 21269.59209 22814.0695 20905.94498 21791.39071 16850.75819 20251.1064 20263.33623 23156.98341 20018.75647 0.951003158 1.062483182 1.139634699 1.044317863 1.088548669 0.841748498 1.011606611 1.01221753 1.15676433 1 14.28906474 -3.877311014 14.07737398 1.031264757 1.034420149 0 0.08718123 0 0 0.020404472 0 0.000132644 3.877311014 0.003155392 TEATQGLDYVPSAGTIS(ph)PTSSLEEDKGFK ddPTM_A459_MK2206_30min_R2 1 TEATQGLDYVPSAGTISPTSSLEEDKGFK 29 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 TEATQGLDY(0.001)VPS(0.051)AGT(0.149)IS(0.614)PT(0.149)S(0.037)SLEEDKGFK 110.01 4.81E-11 6606300 36113 37738 42183 38543 42380 26645 42108 35327 33680 43841 TRUE FALSE 38877.83905 35863.9858 43589.36017 35393.91361 40715.94826 27658.99415 36579.16902 39944.3602 36609.42552 42410.47176 0.916703763 0.845639869 1.027797107 0.834555999 0.960044691 0.652173697 0.862503233 0.941851353 0.863216654 1 15.37213291 -9.520348123 1.129174684 1.000622375 0.876522829 0.128940297 0.094476444 23.71025062 24.46739744 0.149657517 0.02806185 3.02E-10 9.520348123 -0.124099547 TEDEEFLIQHLLQAPS(ph)PPR ddPTM_A459_MK2206_30min_R1 6 TEDEEFLIQHLLQAPSPPR 19 0 Q9ULL5;Q9ULL5-2 Q9ULL5 PRR12 Proline-rich protein 12 1 TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR 164.27 2.44E-07 388588900 14803.98 15918.97 16149.3 11556.74 14246.5 14264.3 16247.8 13913.78 15617.6 13856.05 TRUE FALSE 13544.82376 14882.64216 15053.13051 12446.84212 13679.03174 15071.93234 15163.93891 13792.13329 17241.10541 15572.64208 0.869783283 0.955691531 0.966639471 0.799276196 0.878401473 0.967846834 0.973755052 0.885664309 1.107140671 1 13.92672611 -8.25517582 24.99165418 1.05357034 0.914426165 0.485168336 0.05824074 400.645425 1598594.776 0.042843754 0.0153128 5.56E-09 8.25517582 -0.139144175 TEDEEFLIQHLLQAPS(ph)PPR ddPTM_A459_MK2206_30min_R2 7 TEDEEFLIQHLLQAPSPPR 19 0 Q9ULL5;Q9ULL5-2 Q9ULL5 PRR12 Proline-rich protein 12 1 TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR 205.57 2.24E-16 392932100 681731.3 800048.1 717595.5 828961 798313.7 735648 825638.6 651695.2 654475.5 792542.4 TRUE FALSE 733925.1725 760318.8747 741519.7758 761232.2346 766967.8929 763643.6001 717231.2601 736874.0002 711400.596 766681.8064 0.957274799 0.991700688 0.967180608 0.992892003 1.000373149 0.996037201 0.935500561 0.961121021 0.927895497 1 19.54826842 -9.986435116 5.956191808 0.999999999 0.971609759 0.118892469 0.024146521 34274827.03 8.111080681 0.035627669 0.006201981 1.03E-10 9.986435116 -0.02839024 TEDGDWEWS(ph)DDEMDEK ddPTM_A459_MK2206_30min_R1 2 TEDGDWEWSDDEMDEK 16 0 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK 200 7.62E-07 6410000 2484.3 2888.5 3409.5 2194.72 1951.06 2126.9 2704.3 2400.8 3550.9 4349.7 TRUE FALSE 2272.997239 2700.458125 3178.072639 2363.757715 1873.345149 2247.32324 2523.901081 2379.810059 3920.028762 4888.573675 0.464961232 0.552402051 0.650102228 0.483527072 0.383208943 0.459709394 0.516285782 0.486810718 0.801875766 1 12.25519788 -8.44182192 2.765728616 0.997502 0.499947705 0.862187299 0.066385664 0.092284078 1.458366286 0.070737947 0.019129433 3.62E-09 8.44182192 -0.497554295 TEDGDWEWS(ph)DDEMDEKSEEGK ddPTM_A459_MK2206_30min_R1 2 TEDGDWEWSDDEMDEKSEEGK 21 1 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK 104.66 8.39E-05 23465000 3077.9 3843.9 4030.2 4055.9 2578.8 2080.02 2472.2 2532.1 2912.1 2208.96 TRUE FALSE 2816.108442 3593.661411 3756.641253 4368.286121 2476.080935 2197.788935 2307.284049 2509.962117 3214.823216 2482.622642 1.134328027 1.447526237 1.513174491 1.759544946 0.997365002 0.885269029 0.929373643 1.011012336 1.294930273 1 11.27764927 -6.287032391 24.42888003 1.008975218 1.466030124 0.60972142 0.17388838 391.2132532 373417.1509 0.056292967 0.063855573 5.16E-07 6.287032391 0.457054906 TEDGDWEWS(ph)DDEMDEKSEEGK ddPTM_A459_MK2206_30min_R2 2 TEDGDWEWSDDEMDEKSEEGK 21 1 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK 84.707 0.00063577 7353600 31179 44151 40338 36900 45529 25880 45418 33506 31843 40757 TRUE FALSE 33566.08821 41958.52554 41682.84879 33885.15196 43741.3027 26864.88153 39454.56204 37885.34924 34612.64658 39427.10243 0.85134555 1.064205152 1.05721309 0.859438048 1.109422199 0.681381077 1.000696465 0.960896107 0.877889686 1 15.26690007 TEDGGEFEEGAS(ph)ENNAK ddPTM_A459_MK2206_30min_R2 1 TEDGGEFEEGASENNAK 17 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 TEDGGEFEEGAS(1)ENNAK 234.82 1.28E-64 0 17241 21877 19093 19239 18362 14690 19472 15314 17189 21487 TRUE FALSE 18560.98422 20790.61999 19729.55109 17667.11216 17641.01562 15249.03824 16915.30301 17315.59238 18684.06815 20785.88095 0.892961153 1.000227993 0.949180414 0.849957344 0.84870185 0.733624824 0.813788121 0.833045875 0.898882669 1 14.34331627 -5.774830706 4.902897612 0.839336269 0.953927592 0.263000775 0.068689809 0.199167049 12.56657054 0.018974506 0.030644054 1.68E-06 5.774830706 0.114591323 TEEAAADGGGGMQNEPLT(ph)PGYHGFPAR ddPTM_A459_MK2206_30min_R1 2 TEEAAADGGGGMQNEPLTPGYHGFPAR 27 0 O43251-6;O43251-8 O43251-6 1 TEEAAADGGGGMQNEPLT(1)PGYHGFPAR;TEEAAADGGGGMQNEPLT(1)PGYHGFPAR 203.21 3.41E-40 11702900 1557.95 1252.89 1177.15 1105.71 1057.32 1121.51 1101.97 875.21 875.99 672.98 TRUE FALSE 1425.438171 1171.326633 1097.248338 1190.871976 1015.204705 1185.008927 1028.459592 867.5581312 967.0522953 756.3538431 1.884618138 1.548649014 1.450707691 1.574490546 1.342235139 1.566738819 1.359759855 1.147026804 1.278571272 1 9.562917515 -1.522878746 0.105082725 0.771596934 3.682839793 0.784993859 0.109643531 55.290979 0.410226975 1.209554557 23.25703359 0.03 1.522878746 2.911242859 TEEAAADGGGGMQNEPLT(ph)PGYHGFPAR ddPTM_A459_MK2206_30min_R2 2 TEEAAADGGGGMQNEPLTPGYHGFPAR 27 0 O43251-6;O43251-8 O43251-6 1 TEEAAADGGGGMQNEPLT(0.979)PGY(0.021)HGFPAR;TEEAAADGGGGMQNEPLT(1)PGYHGFPAR 207.12 8.54E-42 11488100 24174.7 27953 23287.9 23935.2 23692 26271.2 18860.1 16116.6 15726.3 17968.8 TRUE FALSE 26025.53362 26564.89467 24064.30696 21979.6176 22761.73304 27270.96893 16383.74621 18223.09496 17094.14515 17382.47953 1.497227917 1.528256922 1.384400133 1.264469638 1.309464107 1.568876804 0.94254368 1.048359926 0.983412356 1 14.08534627 -7.269750909 24.99985107 0.99760896 1.415667155 0.84222611 0.091506483 265.6870856 799144.0166 0.041029675 0.028173744 5.37E-08 7.269750909 0.418058194 TEEARPSPAPGPGT(ph)PTGTPTR ddPTM_A459_MK2206_30min_R1 5 TEEARPSPAPGPGTPTGTPTR 21 1 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 TEEARPSPAPGPGT(0.944)PT(0.048)GT(0.007)PT(0.002)R;T(0.003)EEARPS(0.003)PAPGPGT(0.983)PT(0.008)GT(0.002)PTR;TEEARPSPAPGPGT(0.865)PT(0.046)GT(0.071)PT(0.017)R;T(0.001)EEARPS(0.005)PAPGPGT(0.759)PT(0.162)GT(0.068)PT(0.006)R;TEEARPS(0.03)PAPGPGT(0.97)PT(0.001)GTPTR 201.61 8.81E-16 87345300 4900.33 4431.04 4304.95 3521.72 5859.02 4674.85 5979.31 4531.87 4742 4264.72 TRUE FALSE 4483.531201 4142.578491 4012.741988 3792.963485 5625.642827 4939.535967 5580.44114 4492.248338 5234.947869 4793.065711 0.935420349 0.86428577 0.837197366 0.791343936 1.173704507 1.030558783 1.164273865 0.937239047 1.092191968 1 12.226733 -6.254297893 24.99689977 1.066298811 0.856158953 0.656281458 0.074191521 341.2778879 1194552.993 0.021569954 0.027231542 5.57E-07 6.254297893 -0.210139858 TEEARPSPAPGPGT(ph)PTGTPTR ddPTM_A459_MK2206_30min_R2 2 TEEARPSPAPGPGTPTGTPTR 21 1 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 TEEARPSPAPGPGT(0.767)PT(0.071)GT(0.128)PT(0.034)R;TEEARPSPAPGPGT(0.485)PT(0.168)GT(0.289)PT(0.058)R 95.365 0.00057969 71443000 15661.4 16302.8 16102.9 17437.1 21405.1 35893 18301.4 21358.5 22234 19236 TRUE FALSE 16860.44883 15493.22666 16639.76265 16012.43315 20564.62822 37258.93327 15898.4042 24150.12928 24167.87313 18608.3309 0.906069917 0.832596257 0.89421038 0.860498088 1.105130188 2.002271643 0.854370243 1.29781276 1.298766303 1 14.18366104 -6.521876454 24.99997383 1.312180388 0.885784871 0.327776512 0.280643894 43.243528 1078656.029 0.090422633 0.091530683 3.01E-07 6.521876454 -0.426395517 TEEARPSPAPGPGTPT(ph)GTPTR ddPTM_A459_MK2206_30min_R1 1 TEEARPSPAPGPGTPTGTPTR 21 1 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 TEEARPSPAPGPGT(0.326)PT(0.445)GT(0.186)PT(0.043)R 73.435 0.005309 48308000 1255.1 1002.8 1120.5 995.75 1056.6 866.58 1260.7 925.81 644.26 1305.4 TRUE FALSE 1148.347154 937.5175377 1044.443582 1072.442838 1014.513385 915.6450107 1176.601003 917.7157408 711.2331325 1467.122807 0.782720539 0.639017765 0.71189922 0.730983686 0.691498612 0.624109315 0.801978537 0.625520738 0.484780912 1 10.51877392 -10.71582498 5.830766562 1.000006311 0.679486348 0.555754358 0.086622927 7.05E-06 9.76E-07 0.083254501 0.020191785 1.92E-11 10.71582498 -0.320519963 TEEDSEEVR ddPTM_A459_MK2206_30min_R1 1 TEEDSEEVR 9 0 Q16543;K7EKQ2 Q16543 CDC37 "Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed" 0 153.08 0.014383 592460 1029.9 957.93 687.21 562.71 851.35 726.07 1129.5 766.93 387.27 1053.8 FALSE TRUE 942.3015968 895.5685829 640.5640999 606.0500217 817.4389267 767.1794559 1054.153116 760.2248119 427.5281024 1184.3527 0.795625827 0.756167131 0.540855862 0.511714139 0.690198897 0.647762661 0.890066883 0.641890555 0.360980392 1 10.20988306 TEEGEIDYS(ph)AEEGENR ddPTM_A459_MK2206_30min_R2 1 TEEGEIDYSAEEGENR 16 0 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9;C9IYN3;Q8WVV9-3;Q8WVV9-4 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 TEEGEIDYS(1)AEEGENR 214.82 9.34E-09 6734500 15626 10719 11046 14100 12689 10120 13077 14286 11913 14079 TRUE FALSE 16822.33857 10186.71005 11414.26813 12947.9849 12190.7661 10505.12369 11359.97419 16153.22925 12949.17121 13619.60338 1.235156274 0.747944691 0.838076397 0.950687368 0.895089656 0.77132376 0.834089942 1.186027874 0.950774471 1 13.73339707 -7.742222648 24.99891782 1.051300962 0.8853933 0.191628645 0.139411317 337.3586554 438868.5723 0.063560808 0.036622915 1.81E-08 7.742222648 -0.165907662 TEEGEIDYS(ph)AEEGENRR ddPTM_A459_MK2206_30min_R1 1 TEEGEIDYSAEEGENRR 17 1 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9;C9IYN3;Q8WVV9-3;Q8WVV9-4 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 TEEGEIDY(0.001)S(0.999)AEEGENRR 127.2 0.0019944 6581800 1823.3 1809.7 1542.1 1587.5 1688.2 1341.7 1777.1 2035.2 1884 1536.9 TRUE FALSE 1668.21876 1691.888201 1437.426549 1709.769525 1620.955419 1417.665895 1658.552902 2017.406461 2079.848542 1727.302775 0.96579406 0.979497182 0.832179841 0.989849348 0.938431549 0.820739661 0.960198134 1.167951844 1.204101893 1 10.75430528 -7.691709473 5.220518279 1.139343889 0.921573449 0.605432746 0.07304779 0.121846281 6.115511161 0.035339279 0.019555828 2.03E-08 7.691709473 -0.21777044 TEEGEIDYS(ph)AEEGENRR ddPTM_A459_MK2206_30min_R2 2 TEEGEIDYSAEEGENRR 17 1 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9;C9IYN3;Q8WVV9-3;Q8WVV9-4 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 TEEGEIDY(0.001)S(0.999)AEEGENRR;TEEGEIDYS(1)AEEGENRR 118.02 0.00080112 53331000 84570 82915 74188 89862 99781 93192 95390 80996 79466 91700 TRUE FALSE 91044.74422 78797.56167 76661.39089 82519.98715 95863.09658 96738.48686 82865.17842 91582.4553 86377.80904 88707.83651 1.02634387 0.888281856 0.864200886 0.930244614 1.080660969 1.09052921 0.934135942 1.032405466 0.973733691 1 16.43677394 -6.137167109 7.19709901 1.019373506 0.918554845 0.366623712 0.058505098 0.275318078 14.97756078 0.017781427 0.02304609 7.29E-07 6.137167109 -0.10081866 TEELIES(ph)PK ddPTM_A459_MK2206_30min_R2 1 TEELIESPK 9 0 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 TEELIES(1)PK 132.03 0.0034615 6162500 86834 44234 57867 40502 38676 25648 61020 44978 28488 71109 TRUE FALSE 93482.0778 42037.40388 59796.2569 37192.85704 37157.38591 26624.05261 53008.0007 50856.77903 30965.83475 68788.71915 1.358973956 0.611108978 0.869274172 0.540682506 0.540166852 0.38704097 0.770591477 0.739318593 0.450158618 1 16.06988437 -2.969617203 1.568115457 0.632112713 199.9993878 0.550216032 0.186278955 275.820572 3.2308412 0.049832642 195619.5694 0.001072464 2.969617203 199.367275 TEELIES(ph)PKLESSEGEIIQTVDR ddPTM_A459_MK2206_30min_R1 6 TEELIESPKLESSEGEIIQTVDR 23 1 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 T(0.002)EELIES(0.954)PKLES(0.018)S(0.024)EGEIIQT(0.002)VDR;T(0.003)EELIES(0.992)PKLES(0.004)S(0.001)EGEIIQTVDR;TEELIES(1)PKLESSEGEIIQTVDR;T(0.002)EELIES(0.789)PKLES(0.15)S(0.058)EGEIIQTVDR;T(0.001)EELIES(0.99)PKLES(0.004)S(0.004)EGEIIQT(0.001)VDR;T(0.01)EELIES(0.987)PKLES(0.002)S(0.001)EGEIIQTVDR 109.37 9.30E-06 282676300 4978.74 6600.3 6381.25 6108.91 4318.13 4087.62 4720.42 4678.54 5482.51 4258.99 TRUE FALSE 4555.272019 6170.61927 5948.108529 6579.419307 4146.129738 4319.057512 4405.529395 4637.636018 6052.436534 4786.625835 0.951666618 1.289137585 1.242651658 1.374542221 0.866190482 0.902317762 0.920383073 0.968873728 1.264447388 1 12.22479332 -6.267332566 24.99814712 0.977910593 1.221841679 0.375360004 0.143335923 502.5619112 2131800.796 0.044877267 0.052208375 5.40E-07 6.267332566 0.243931085 TEELIES(ph)PKLESSEGEIIQTVDR ddPTM_A459_MK2206_30min_R2 2 TEELIESPKLESSEGEIIQTVDR 23 1 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 T(0.019)EELIES(0.978)PKLES(0.002)S(0.002)EGEIIQTVDR;T(0.002)EELIES(0.998)PKLESSEGEIIQTVDR 80.109 0.00032344 27906000 7217.2 9242.2 10346.1 10997.4 9379.6 8572.6 9104 5179.5 8045.5 9505.1 TRUE FALSE 7769.754381 8783.245787 10691.03381 10098.87724 9011.309775 8898.8363 7908.633864 5856.478434 8745.283047 9194.949365 0.845002411 0.95522503 1.162707198 1.098306999 0.980028211 0.967796118 0.860106299 0.636923402 0.951096379 1 13.16662591 -7.167794075 2.806268155 0.829826692 1.016617922 0.234961822 0.119904138 0.340456888 5.210539302 0.053138436 0.038510255 6.80E-08 7.167794075 0.18679123 TEEPDRDER ddPTM_A459_MK2206_30min_R2 1 TEEPDRDER 9 1 O95232;J3KPP4;H0YA81 O95232 LUC7L3 Luc7-like protein 3 0 120.87 0.018156 15050000 160110 150800 146470 139810 119270 102400 133860 118180 126810 168870 FALSE TRUE 172368.1447 143311.4913 151353.2367 128387.0758 114586.8605 106296.9038 116284.0212 133626.5318 137839.7046 163359.7857 1.055144287 0.877275216 0.926502419 0.785916039 0.701438607 0.650691988 0.711827704 0.817989147 0.843779906 1 17.31769335 -5.193258967 1.183990472 0.768374666 1.05282484 0.373920778 0.098688244 0.848293702 1.608908035 0.032175073 0.249733683 6.41E-06 5.193258967 0.284450174 TEEPLGS(ph)PHPSGTVESPGEGPQDTR ddPTM_A459_MK2206_30min_R1 3 TEEPLGSPHPSGTVESPGEGPQDTR 25 0 A0A0A0MR84;M0R202;A0A0B4J2G2;Q9NWS9-2;Q9NWS9 A0A0A0MR84 ZNF446 Zinc finger protein 446 1 TEEPLGS(0.99)PHPS(0.009)GT(0.001)VESPGEGPQDTR;TEEPLGS(1)PHPSGTVESPGEGPQDTR;TEEPLGS(1)PHPSGTVESPGEGPQDTR 151.05 3.11E-10 19455200 3564.56 2143.93 2841.41 1474.86 4729.2 4597.04 4333.48 3558.8 2006.19 1950.14 TRUE FALSE 3261.375454 2004.359767 2648.543006 1588.453973 4540.82595 4857.320432 4044.401456 3527.685787 2214.74063 2191.738066 1.488031578 0.914506983 1.20842132 0.724746263 2.071792255 2.216195679 1.845294161 1.609538038 1.010495124 1 11.09785968 -6.260351705 24.9992422 1.696548679 1.08071763 0.279956699 0.416286091 120.8164466 2776858.926 0.129127649 0.157363659 5.49E-07 6.260351705 -0.615831049 TEEPLGS(ph)PHPSGTVESPGEGPQDTR ddPTM_A459_MK2206_30min_R2 2 TEEPLGSPHPSGTVESPGEGPQDTR 25 0 A0A0A0MR84;M0R202;A0A0B4J2G2;Q9NWS9-2;Q9NWS9 A0A0A0MR84 ZNF446 Zinc finger protein 446 1 T(0.009)EEPLGS(0.988)PHPS(0.002)GT(0.001)VESPGEGPQDTR;TEEPLGS(1)PHPSGTVESPGEGPQDTR 122.68 5.09E-08 28410000 26365.7 48118 36937 72497 66041 73110 65857 42965 64409 53039 TRUE FALSE 28384.27826 45728.53009 38168.46114 66573.76319 63447.89851 75892.25228 57209.89679 48580.67302 70011.1784 51308.34177 0.553209815 0.891249425 0.743903619 1.297523188 1.23660006 1.479140616 1.115021355 0.946837714 1.364518438 1 15.64690578 -5.755157464 24.98740745 1.212355172 0.745633646 0.624675685 0.168959046 99.09897815 394178.4086 0.046650935 0.078305256 1.76E-06 5.755157464 -0.466721526 TEES(ph)PASDEAGEK ddPTM_A459_MK2206_30min_R1 1 TEESPASDEAGEK 13 0 A6NL93;A6NEL0;P05114 A6NL93 HMGN1 Non-histone chromosomal protein HMG-14 1 T(0.026)EES(0.973)PAS(0.001)DEAGEK 185.95 0.00012945 11624000 4081.8 4439.6 3909.9 3072.8 2603.5 2824.4 4299.1 3158.9 5110 6548.1 TRUE FALSE 3734.621476 4150.581233 3644.506882 3309.467588 2499.797082 2984.315087 4012.314883 3131.28207 5641.202786 7359.328064 0.507467726 0.563989157 0.495222777 0.449696978 0.339677354 0.405514615 0.545201253 0.425484778 0.766537751 1 12.84535833 -8.474868298 2.874330344 0.998346436 0.465998046 0.877854021 0.064924367 0.081716788 1.48914517 0.068554737 0.018413366 3.35E-09 8.474868298 -0.53234839 TEES(ph)PASDEAGEK ddPTM_A459_MK2206_30min_R2 2 TEESPASDEAGEK 13 0 A6NL93;A6NEL0;P05114 A6NL93 HMGN1 Non-histone chromosomal protein HMG-14 1 TEES(0.998)PAS(0.002)DEAGEK;T(0.001)EES(0.993)PAS(0.007)DEAGEK 185.66 0.00012725 47240000 332380 226600 244730 230620 185995 145308 292390 225130 140840 263460 TRUE FALSE 357827.2684 215347.3735 252889.1761 211777.6083 178691.9018 150837.7978 253998.8418 254555.264 153090.0086 254863.3218 1.403996722 0.844952393 0.9922541 0.830945806 0.701128356 0.591837997 0.996608064 0.998791282 0.600674933 1 17.95936424 -2.617012367 1.331057567 0.823305403 199.9696352 0.535088508 0.155987963 397.4754374 2.71516733 0.045581715 239640.3326 0.002415392 2.617012367 199.1463298 TEESEPLPSCPGS(ph)PPLPDDLLPLDCK ddPTM_A459_MK2206_30min_R2 2 TEESEPLPSCPGSPPLPDDLLPLDCK 26 0 O94864;O94864-2 O94864 SUPT7L STAGA complex 65 subunit gamma 1 TEESEPLPS(0.011)CPGS(0.989)PPLPDDLLPLDCK;TEES(0.001)EPLPS(0.05)CPGS(0.949)PPLPDDLLPLDCK 80.102 0.00082256 1474200 21485.55 15847.7 18538.2 21035.6 17068.3 14034.9 21282.26 19385.17 12191.99 23188 TRUE FALSE 23130.50023 15060.72626 19156.25434 19316.92419 16398.11278 14569.00795 18487.8737 21918.87828 13252.42725 22431.37746 1.03116718 0.671413349 0.853993669 0.861156397 0.731034588 0.649492345 0.824196986 0.977152576 0.590798638 1 14.4532306 -10.77340244 17.84240987 1 0.798225209 0.168313965 0.134076481 0 0 0.123488556 0.029950374 1.68E-11 10.77340244 -0.201774791 TEESKADS(ph)PPPSYPTQQAEQAPNTCECHVCK ddPTM_A459_MK2206_30min_R2 1 TEESKADSPPPSYPTQQAEQAPNTCECHVCK 31 1 A0A1B0GVL4;P78312-6;P78312-2;P78312-5;P78312;D6RFZ4;P78312-3;E7EUR8;P78312-4 A0A1B0GVL4;E7EUR8 FAM193A Protein FAM193A 1 T(0.003)EES(0.003)KADS(0.351)PPPS(0.351)Y(0.284)PT(0.009)QQAEQAPNTCECHVCK 89.345 3.34E-07 20024000 59751 57983 72674 57555 62880 40177 76159 53086 49770 68555 TRUE FALSE 64325.5825 55103.64854 75096.91489 52852.57239 60411.01525 41705.96389 66159.23182 60024.52247 54098.90464 66318.05596 0.969955792 0.830899636 1.132375094 0.796955997 0.910928621 0.628877962 0.997605115 0.905100754 0.815749253 1 16.0171141 TEESKADSPPPS(ph)YPTQQAEQAPNTCECHVCK ddPTM_A459_MK2206_30min_R2 1 TEESKADSPPPSYPTQQAEQAPNTCECHVCK 31 1 A0A1B0GVL4;P78312-6;P78312-2;P78312-5;P78312;D6RFZ4;P78312-3;E7EUR8;P78312-4 A0A1B0GVL4;E7EUR8 FAM193A Protein FAM193A 1 T(0.012)EES(0.006)KADS(0.206)PPPS(0.418)Y(0.351)PT(0.006)QQAEQAPNTCECHVCK 92.412 1.47E-07 21364000 45963 61351 55671 49224 54548 42659 55967 47718 37852 65751 TRUE FALSE 49481.96262 58304.39855 57527.04335 45202.24174 52406.17144 44282.41814 48618.46567 53954.90644 41144.29854 63605.55025 0.77795039 0.916655831 0.904434332 0.710665053 0.823924504 0.69620368 0.764374579 0.848273558 0.646866482 1 15.95686504 -5.749658046 24.99913354 0.775154158 0.871377758 0.121732036 0.098548531 385.3489531 817675.2567 0.024872813 0.042635848 1.78E-06 5.749658046 0.0962236 TEESPAS(ph)DEAGEKEAK ddPTM_A459_MK2206_30min_R1 2 TEESPASDEAGEKEAK 16 1 A6NL93;A6NEL0;P05114 A6NL93 HMGN1 Non-histone chromosomal protein HMG-14 1 TEES(0.001)PAS(0.998)DEAGEKEAK;TEES(0.001)PAS(0.999)DEAGEKEAK 97.352 0.0042171 26858000 5158.4 5600.2 5118.4 5023.3 3333.04 3365.25 3893.92 3633.47 4204.39 3684.64 TRUE FALSE 4719.650992 5235.625962 4770.977269 5410.195436 3200.277959 3555.787547 3634.163702 3601.702955 4641.451386 4141.121021 1.13970371 1.264301607 1.152098006 1.306456732 0.772804741 0.858653376 0.87757969 0.869741052 1.12082003 1 12.01580565 -6.256858138 24.99998751 0.905238538 1.214577133 0.686589022 0.098799383 219.4770078 1197693.174 0.029276574 0.036524071 5.54E-07 6.256858138 0.309338595 TEESPASDEAGEKEAKS(ph)D ddPTM_A459_MK2206_30min_R1 2 TEESPASDEAGEKEAKSD 18 2 A6NL93;A6NEL0;P05114 A6NL93 HMGN1 Non-histone chromosomal protein HMG-14 1 TEESPASDEAGEKEAKS(1)D;TEESPASDEAGEKEAKS(1)D 95.122 0.0046095 22135000 6034.7 8075.3 7908.8 7339.5 4820.3 4122.3 5040.1 5361.8 6638.2 5078.5 TRUE FALSE 5521.417076 7549.596502 7371.972691 7904.789562 4628.297244 4355.701064 4703.884125 5314.922348 7328.264645 5707.662921 0.967369158 1.322712397 1.291592162 1.384943307 0.810891832 0.763132148 0.824134885 0.93119065 1.283934379 1 12.47868442 -6.26425315 24.99118341 0.917915465 1.251011119 0.434103769 0.170372888 231.1863283 2053333.38 0.054168368 0.064177331 5.44E-07 6.26425315 0.333095654 TEESPASDEAGEKEAKS(ph)D ddPTM_A459_MK2206_30min_R2 1 TEESPASDEAGEKEAKSD 18 2 A6NL93;A6NEL0;P05114 A6NL93 HMGN1 Non-histone chromosomal protein HMG-14 1 TEESPASDEAGEKEAKS(1)D 84.689 0.0089494 41191000 46477 54303 60545 48815 45410 29465 67671 48480 34881 60484 TRUE FALSE 50035.31485 51606.39198 62563.54008 44826.65835 43626.97523 30586.31122 58785.71641 54816.50246 37914.88633 58510.41203 0.855152324 0.882003565 1.069271911 0.766131305 0.745627551 0.522749886 1.00470522 0.936867483 0.648002381 1 15.83640576 -5.801199586 24.99983539 0.795091668 0.93012928 0.134237712 0.152451547 304.6161084 191530.7444 0.043956796 0.065199499 1.58E-06 5.801199586 0.135037611 TEFLDLDNSPLSPPS(ph)PR ddPTM_A459_MK2206_30min_R1 1 TEFLDLDNSPLSPPSPR 17 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 TEFLDLDNS(0.001)PLS(0.099)PPS(0.9)PR 99.097 0.0032578 1872000 848.04 820.29 852.47 833.45 888.89 1112.2 947.32 839.25 987.43 977.51 TRUE FALSE 775.9097448 766.8889719 794.6067115 897.6424634 853.483629 1175.171803 884.1260113 831.9125257 1090.076882 1098.611319 0.70626411 0.698053041 0.723282837 0.817070103 0.776874964 1.069688417 0.804766887 0.757240083 0.992231614 1 10.10146535 -6.080076705 1.465474967 0.898583401 0.701989904 0.46783604 0.093845064 0.400555756 1.73223671 0.033895092 0.055198121 8.32E-07 6.080076705 -0.196593498 TEFLDLDNSPLSPPS(ph)PR ddPTM_A459_MK2206_30min_R2 1 TEFLDLDNSPLSPPSPR 17 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 TEFLDLDNSPLS(0.002)PPS(0.998)PR 99.371 0.0077567 0 483.27 0 0 0 0 0 605.31 0 0 735.5 TRUE FALSE 520.2695228 0 0 0 0 0 525.8320699 0 0 711.5006952 0.731228411 0 0 0 0 0 0.73904646 0 0 1 9.474721356 -11.37202504 2.431013699 1.36459622 0.151466789 0.427488729 0.290166982 19348340.89 11365267.84 40934831.13 0.074203167 4.25E-12 11.37202504 -1.213129431 TEFLHSQNS(ph)LSPR ddPTM_A459_MK2206_30min_R1 2 TEFLHSQNSLSPR 13 0 Q96FS4;F6RY50 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 TEFLHS(0.001)QNS(0.925)LS(0.074)PR;TEFLHSQNS(0.992)LS(0.008)PR 136.39 0.00072522 26932000 6456.8 6373 7102.2 5219 7055.1 6459.4 6870.5 6185.9 5415.1 4762.3 TRUE FALSE 5907.615254 5958.116542 6620.122452 5620.968284 6774.080428 6825.125646 6412.181481 6131.817328 5978.019023 5352.289678 1.103754769 1.113190223 1.236876711 1.050198816 1.265641592 1.275178673 1.198025867 1.145643771 1.116908722 1 12.38594048 -8.629242366 1.649052392 1.000952555 1.17830456 0.372858235 0.069020813 0.573489602 3.310653434 0.068817098 0.019772271 2.35E-09 8.629242366 0.177352004 TEFLHSQNSLS(ph)PR ddPTM_A459_MK2206_30min_R2 2 TEFLHSQNSLSPR 13 0 Q96FS4;F6RY50 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 TEFLHS(0.015)QNS(0.171)LS(0.814)PR;TEFLHSQNS(0.037)LS(0.963)PR 112.67 0.0031962 36557900 82173 121253 102495 127962 103358 97962 104745 77348 91195 99017 TRUE FALSE 88464.22806 115231.7523 105912.1321 117507.0953 99299.64559 101690.0126 90991.85568 87457.64918 99126.97626 95786.0834 0.923560343 1.203011421 1.105715239 1.226765842 1.036681343 1.061636607 0.949948598 0.91305173 1.034878687 1 16.54752844 -6.891055074 1.948006293 0.969274529 1.117386516 0.322366602 0.084494282 0.352521865 2.734856861 0.035089397 0.029354057 1.29E-07 6.891055074 0.148111986 TEFSPAAFEQEQLGS(ph)PQVR ddPTM_A459_MK2206_30min_R2 1 TEFSPAAFEQEQLGSPQVR 19 0 Q92585 Q92585 MAML1 Mastermind-like protein 1 1 TEFSPAAFEQEQLGS(1)PQVR 182.47 9.84E-15 0 8555.2 4740.9 9565.4 2736.7 7189.2 5366.8 5091.6 4166.1 8079.1 7351.6 TRUE FALSE 9210.19269 4505.4738 9884.305662 2513.102856 6906.915885 5571.037335 4423.066804 4710.623574 8781.805514 7111.717894 1.29507284 0.633528195 1.389861888 0.353374936 0.971202175 0.783360282 0.6219407 0.66237492 1.234836033 1 12.79598238 -4.744922667 24.7842699 0.835423524 1.29507432 0.169509551 0.29390772 1529.309986 2294679.068 0.068858635 1.838200727 1.80E-05 4.744922667 0.459650796 TEGSS(ph)PPDSK ddPTM_A459_MK2206_30min_R1 2 TEGSSPPDSK 10 0 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 TEGS(0.188)S(0.811)PPDSK;TEGS(0.14)S(0.86)PPDS(0.001)K 115.33 0.0050116 0 6469.6 6610.6 4273.3 4584.3 3822.6 3968.9 5008.8 5530 1303.99 3090.6 TRUE FALSE 5919.326547 6180.248738 3983.240302 4937.38358 3670.337748 4193.615688 4674.672091 5481.651793 1439.544427 3473.486861 1.704145369 1.779263601 1.14675554 1.421448757 1.056672414 1.207321592 1.345815395 1.578140932 0.41443785 1 11.76216892 -1.522878745 0.280108871 1.017250274 6.855194372 0.390818304 0.296258309 57.81683739 0.815008401 0.325234584 165.2142804 0.03 1.522878745 5.837944098 TEGSS(ph)PPDSK ddPTM_A459_MK2206_30min_R2 3 TEGSSPPDSK 10 0 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 TEGS(0.024)S(0.976)PPDSK;TEGS(0.034)S(0.966)PPDSK;TEGS(0.021)S(0.978)PPDS(0.001)K 127.87 0.0032143 14465700 105541 97419 86859 90846 100205 74193 113089 94544 83090 109844 TRUE FALSE 113621.3001 92581.31412 89754.83571 83423.5912 96270.44821 77016.4666 98240.27846 106901.2254 90317.01801 106259.7993 1.069278324 0.871273188 0.844673492 0.785090804 0.905991248 0.724794016 0.924529118 1.006036395 0.849964132 1 16.69723637 -11.01036315 6.953170093 1.000032076 0.882567071 0.112686897 0.094570428 4.76E-05 3.51E-06 0.092783451 0.022497153 9.76E-12 11.01036315 -0.117465005 TEGT(ph)PPPPGQPAK ddPTM_A459_MK2206_30min_R1 4 TEGTPPPPGQPAK 13 0 F8VWT9;J3KPF0;Q9Y4D8-2;Q9Y4D8-4;Q9Y4D8;A0A494C150 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 T(0.128)EGT(0.872)PPPPGQPAK;T(0.055)EGT(0.945)PPPPGQPAK;T(0.058)EGT(0.942)PPPPGQPAK;T(0.026)EGT(0.974)PPPPGQPAK 126.56 0.0047125 42081700 37873.7 36566.9 36446.2 31567.6 35248.7 29032.4 33700.2 33786 32492.6 31237.8 TRUE FALSE 34652.34293 34186.38816 33972.33349 33998.94202 33844.66964 30676.1894 31452.12115 33490.61256 35870.32205 35107.7745 0.987027615 0.97375549 0.967658417 0.968416327 0.964022076 0.873771973 0.895873396 0.953937213 1.02172019 1 15.09950293 -8.214064989 6.265062256 1.010803689 0.946336126 0.349190164 0.034278985 0.239155576 23.84051774 0.027734894 0.009977486 6.11E-09 8.214064989 -0.064467563 TEGT(ph)PPPPGQPAK ddPTM_A459_MK2206_30min_R2 3 TEGTPPPPGQPAK 13 0 F8VWT9;J3KPF0;Q9Y4D8-2;Q9Y4D8-4;Q9Y4D8;A0A494C150 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 TEGT(1)PPPPGQPAK;TEGT(1)PPPPGQPAK;TEGT(1)PPPPGQPAK 145.52 0.0014616 58417400 161397 199056 178092 195124 181647 149036 188093 140955 163011 175065 TRUE FALSE 173753.6784 189171.1685 184029.4984 179181.745 174514.6261 154707.6694 163396.1632 159378.3025 177189.4021 169352.6434 1.025987401 1.117025189 1.086664458 1.058039257 1.030480674 0.913523795 0.964827947 0.941103128 1.046274794 1 17.36967098 -6.484040952 3.408646858 0.968804617 1.075503986 0.57385148 0.039773234 0.164700616 3.908391662 0.013117374 0.014312711 3.28E-07 6.484040952 0.106699369 TEIKEEEDQPSTSATQS(ph)SPAPGQSK ddPTM_A459_MK2206_30min_R1 1 TEIKEEEDQPSTSATQSSPAPGQSK 25 1 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 TEIKEEEDQPSTS(0.003)AT(0.071)QS(0.463)S(0.463)PAPGQSK 134.47 2.66E-08 44542000 6281.8 7124 7627 6152.9 4876.1 4478.5 5663.3 5460.8 8016.4 7895.5 TRUE FALSE 5747.499923 6660.226305 7109.30049 6626.797424 4681.874612 4732.0688 5285.51159 5413.056801 8849.733467 8873.654148 0.647703846 0.750561854 0.801169436 0.746794648 0.527615178 0.533271719 0.595640928 0.610014399 0.997304303 1 13.11531261 -8.265984596 24.71670013 0.998652234 0.653112323 0.718495953 0.08688975 211.4405836 1149779.538 0.087206562 0.025520377 5.42E-09 8.265984596 -0.345539911 TEIKEEEDQPSTSATQS(ph)SPAPGQSK ddPTM_A459_MK2206_30min_R2 1 TEIKEEEDQPSTSATQSSPAPGQSK 25 1 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 TEIKEEEDQPSTSAT(0.068)QS(0.465)S(0.465)PAPGQS(0.002)K 120.32 4.25E-08 24196000 213850 174420 177280 181030 160240 103960 218640 177410 119130 212040 TRUE FALSE 230222.5204 165758.5564 183190.4267 166239.2699 153948.1725 107916.2706 189932.3054 200598.0961 129491.7121 205121.1522 1.122373378 0.808100748 0.893084037 0.810444306 0.750523146 0.526109909 0.925951826 0.977949344 0.631293802 1 17.64611675 -2.51417269 1.390068428 0.80120691 199.4358006 0.288507953 0.14273424 1164.076813 4.827993687 0.040756203 734663.8271 0.003060746 2.51417269 198.6345937 TEIKEEEDQPSTSATQSS(ph)PAPGQSK ddPTM_A459_MK2206_30min_R1 1 TEIKEEEDQPSTSATQSSPAPGQSK 25 1 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 TEIKEEEDQPST(0.006)S(0.019)AT(0.047)QS(0.183)S(0.743)PAPGQS(0.001)K 87.457 4.27E-05 38964000 8581.7 9353.4 9514.4 8286.9 5848.2 5175.1 7808.2 6468.4 9784.5 9650.7 TRUE FALSE 7851.781351 8744.49196 8868.589037 8925.158474 5615.25381 5468.10969 7287.329225 6411.847461 10801.63379 10846.30158 0.723913243 0.806218774 0.817660193 0.822875744 0.517711385 0.504145091 0.671872267 0.591155189 0.99588175 1 13.40491557 -8.272687207 23.94585791 0.997941045 0.683571305 0.56609099 0.110654784 387.6414647 825246.751 0.117178446 0.031475797 5.34E-09 8.272687207 -0.31436974 TEIKEEEDQPSTSATQSS(ph)PAPGQSK ddPTM_A459_MK2206_30min_R2 3 TEIKEEEDQPSTSATQSSPAPGQSK 25 1 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 TEIKEEEDQPST(0.008)S(0.006)AT(0.127)QS(0.127)S(0.728)PAPGQS(0.004)K;TEIKEEEDQPST(0.001)S(0.002)AT(0.074)QS(0.171)S(0.749)PAPGQS(0.004)K;TEIKEEEDQPST(0.001)S(0.002)AT(0.015)QS(0.196)S(0.784)PAPGQS(0.002)K 94.389 4.72E-06 166547000 442971 437031 468448 455686 378643 256746 526440 368919 320493 545340 TRUE FALSE 476885.2003 415328.676 484065.8225 418454.9961 363775.5733 266516.6489 457317.7956 417137.98 348368.9018 527545.6005 0.903969628 0.787284882 0.917581005 0.793211043 0.68956233 0.505201159 0.866878229 0.790714546 0.660357894 1 19.00893628 -5.989851834 6.646436316 0.735431189 0.861013674 0.137257339 0.127111203 0.26660722 55.67308941 0.036008653 0.051871748 1.02E-06 5.989851834 0.125582485 TEIMS(ph)PLYQDEAPK ddPTM_A459_MK2206_30min_R1 7 TEIMSPLYQDEAPK 14 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 T(0.005)EIMS(0.994)PLYQDEAPK;T(0.031)EIMS(0.969)PLYQDEAPK;T(0.016)EIMS(0.984)PLYQDEAPK;T(0.001)EIMS(0.999)PLYQDEAPK;T(0.001)EIMS(0.999)PLYQDEAPK;TEIMS(1)PLYQDEAPK;T(0.191)EIMS(0.809)PLYQDEAPK 214.82 8.90E-07 245461400 35109.2 37743 39569.7 30293.1 28225.9 27217.5 33828.4 32642.7 38023.2 35474.3 TRUE FALSE 32122.97817 35285.92384 36883.81901 32626.27981 27101.60263 28758.53133 31571.76916 32357.30832 41975.84771 39869.1241 0.805710657 0.885043869 0.925122381 0.818334502 0.679764185 0.721323379 0.791885196 0.811588141 1.05284098 1 15.28298429 -8.255846398 23.57099448 1.026420515 0.804592999 0.634176317 0.067314428 136.6653686 575975.0458 0.056242408 0.019831662 5.55E-09 8.255846398 -0.221827516 TEIMS(ph)PLYQDEAPK ddPTM_A459_MK2206_30min_R2 9 TEIMSPLYQDEAPK 14 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 T(0.104)EIMS(0.896)PLYQDEAPK;T(0.002)EIMS(0.923)PLY(0.075)QDEAPK;TEIMS(1)PLYQDEAPK;TEIMS(0.997)PLY(0.003)QDEAPK;T(0.002)EIMS(0.997)PLYQDEAPK;TEIMS(0.953)PLY(0.047)QDEAPK;T(0.002)EIMS(0.997)PLYQDEAPK;TEIMS(1)PLYQDEAPK;T(0.02)EIMS(0.98)PLYQDEAPK 209.33 5.27E-06 116204800 684209 635476 637936 646784 634474 480306 714966 519103 471995 751233 TRUE FALSE 736592.5671 603919.1859 659204.4678 593939.6782 609561.3628 498584.3814 621090.1054 586951.5444 513048.2719 726720.3287 1.013584646 0.83102008 0.907095126 0.817287827 0.838783971 0.686074631 0.854648041 0.807671839 0.705977598 1 19.47104074 -1.522878745 0.751267775 0.806161207 35.29346046 0.284848145 0.085975575 451.7641815 1.94279144 0.030366921 26370.70987 0.03 1.522878745 34.48729925 TEKEPDATPPS(ph)PR ddPTM_A459_MK2206_30min_R1 1 TEKEPDATPPSPR 13 1 A0A494C0S2;A0A090HNM7;A0A1W2PS85;R4GMW8;P28715 A0A494C0S2 ERCC5-201;BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells 1 TEKEPDATPPS(1)PR 155.26 0.0005491 0 1376.5 1311.9 1083 1164.2 1361.8 1142.5 1133.8 1153.3 987.49 854.72 TRUE FALSE 1259.421447 1226.495072 1009.488977 1253.866886 1307.556622 1207.187363 1058.166271 1143.21682 1090.143119 960.6091664 1.311065406 1.276788849 1.050884181 1.305283074 1.361174417 1.256689406 1.101557541 1.190095681 1.134845635 1 9.907805765 -8.393967141 0.662043137 1.003420429 1.255148417 0.453566318 0.085813384 0.756951194 0.773765037 0.091473225 0.038687308 4.04E-09 8.393967141 0.251727988 TEKEPDATPPS(ph)PR ddPTM_A459_MK2206_30min_R2 1 TEKEPDATPPSPR 13 1 A0A494C0S2;A0A090HNM7;A0A1W2PS85;R4GMW8;P28715 A0A494C0S2 ERCC5-201;BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells 1 TEKEPDAT(0.014)PPS(0.986)PR 63.062 0.045976 14314000 42085 61587 52448 51918 53556 55984 49591 46597 48818 54075 TRUE FALSE 45307.05996 58528.67914 54196.59014 47676.13332 51453.12234 58114.51035 43079.64213 52687.38789 53064.1014 52310.53718 0.866117276 1.118869778 1.036054934 0.911405921 0.983609137 1.110952276 0.823536604 1.007204107 1.014405591 1 15.67481396 -7.227093711 24.99981688 0.961886659 1.005953044 0.053478733 0.088926316 2135.160313 1554160.274 0.033647118 0.0260617 5.93E-08 7.227093711 0.044066386 TELGSQT(ph)PESSR ddPTM_A459_MK2206_30min_R2 2 TELGSQTPESSR 12 0 H0YID1;F8VUX5;H0YIQ8;F8VXI8;F8VX10;Q9H9L4-4;Q9H9L4 H0YID1 KANSL2 KAT8 regulatory NSL complex subunit 2 1 TELGS(0.004)QT(0.961)PES(0.021)S(0.014)R;TELGS(0.004)QT(0.989)PES(0.006)S(0.001)R 145.61 0.0015867 11425200 48823 53319 43643 47143 48304 48755 58887 42673 44560 47772 TRUE FALSE 52560.92642 50671.25599 45098.03584 43291.2661 46407.34225 50610.40569 51155.06616 48250.50762 48435.74825 46213.20355 1.137357343 1.096467072 0.975869067 0.93677267 1.004200936 1.095150342 1.106936162 1.044084892 1.048093284 1 15.49601748 -6.753156534 24.98834565 1.064613445 1.025617229 0.047564892 0.059937801 541.7693349 1634455.755 0.022154448 0.021804228 1.77E-07 6.753156534 -0.038996216 TELSQSDMFDQR ddPTM_A459_MK2206_30min_R1 2 TELSQSDMFDQR 12 0 B7Z7P8;P62495-2;P62495 B7Z7P8 ETF1 Eukaryotic peptide chain release factor subunit 1 0 ; 225.67 4.42E-07 32625000 3978.9 4069.2 4143.4 3203.4 3842.5 4063.2 4341 3614.3 3819.7 3701.2 FALSE TRUE 3640.473661 3804.29434 3862.157552 3450.126423 3689.445088 4293.254873 4051.419811 3582.700556 4216.771484 4159.732599 0.875170116 0.914552619 0.928462939 0.829410627 0.886942851 1.032098764 0.973961598 0.861281458 1.013712152 1 12.02227507 -6.721861161 24.27063451 0.967400306 0.887557851 0.442428308 0.049633214 126.1330992 77348.29248 0.016749291 0.016748996 1.90E-07 6.721861161 -0.079842456 TELTAATGER ddPTM_A459_MK2206_30min_R2 1 TELTAATGER 10 0 Q9P265 Q9P265 DIP2B Disco-interacting protein 2 homolog B 0 89.029 0.044142 8287000 4074.8 84914 30830 166740 91283 380150 0 51682 224930 15726 FALSE TRUE 4386.769821 80697.29424 31857.85681 153116.8086 87698.77076 394616.8746 0 58437.01485 244494.0048 15212.86191 0.288359274 5.304543926 2.094139617 10.0649575 5.764777942 25.93968689 0 3.841290035 16.07153252 1 13.89300396 -1.724768315 10.5336815 7.308812754 1.222157553 0 7.871565021 0 0 1.777240208 0 0.018846542 1.724768315 -6.0866552 TEMDKS(ph)PFNSPS(ph)PQDSPR ddPTM_A459_MK2206_30min_R2 1 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 2 T(0.033)EMDKS(0.967)PFNS(0.097)PS(0.81)PQDS(0.093)PR 75.3 0.030681 8778100 61796 62599 51125 51417 50799 43639 67964 47285 48988 67370 TRUE FALSE 66527.14927 59490.42469 52829.48198 47216.06663 48804.37602 45299.71272 59040.24516 53465.31185 53248.88769 65171.72242 1.020797776 0.912825724 0.810619699 0.724487015 0.748858158 0.695082331 0.905918134 0.820375922 0.817055093 1 15.9919585 -4.989516086 2.361600835 0.80198301 1.029866465 0.365855914 0.084294174 0.377879695 3.494938831 0.022338325 0.148580449 1.02E-05 4.989516086 0.227883455 TEMDKS(ph)PFNSPSPQDSPR ddPTM_A459_MK2206_30min_R1 1 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 T(0.091)EMDKS(0.905)PFNS(0.004)PSPQDSPR 57.986 0.032013 37425000 3709.5 4933.6 4025.9 3942.1 3082.1 2724.4 3476.2 3472 3713.9 3131.7 TRUE FALSE 3393.987546 4612.421743 3752.633125 4245.721225 2959.333431 2878.653174 3244.309041 3441.64467 4099.973195 3519.678639 0.964289043 1.310466726 1.066186294 1.206280931 0.840796486 0.817873865 0.921762858 0.977829235 1.16487146 1 11.781228 -6.254098961 24.89540095 0.944343383 1.144165861 0.346561618 0.122486218 588.9429709 1997428.552 0.036875162 0.046641433 5.57E-07 6.254098961 0.199822479 TEMDKS(ph)PFNSPSPQDSPR ddPTM_A459_MK2206_30min_R2 3 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 T(0.009)EMDKS(0.941)PFNS(0.045)PS(0.005)PQDSPR;T(0.447)EMDKS(0.552)PFNSPSPQDSPR;T(0.127)EMDKS(0.868)PFNS(0.002)PS(0.003)PQDSPR 80.508 0.0061623 42997000 76907 82569 91770 97621 97656 67619 110275 75420 79251 96363 TRUE FALSE 82795.05905 78468.74353 94829.566 89645.05203 93821.53476 70192.28843 95795.76004 85277.65296 86144.10873 93218.6832 0.888180955 0.841770564 1.017280686 0.961664003 1.006467068 0.752985196 1.027645497 0.91481289 0.924107762 1 16.50833151 TEMDKSPFNSPS(ph)PQDSPR ddPTM_A459_MK2206_30min_R1 1 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 TEMDKSPFNS(0.026)PS(0.901)PQDS(0.073)PR 76.533 0.0079863 14021000 1841.6 1434.2 1781.1 1578.8 1731.2 1387.5 1518 1676 1518.8 1048.5 TRUE FALSE 1684.962249 1340.833319 1660.203894 1700.39945 1662.242638 1466.059051 1416.73699 1661.346909 1676.684695 1178.396096 1.429877658 1.13784603 1.408867443 1.442977837 1.410597544 1.244113975 1.202258727 1.409837418 1.422853233 1 10.20260884 -6.768594106 24.97290583 1.278080388 1.360010604 0.128095562 0.137338467 481.9790168 1682292.073 0.048322994 0.043501872 1.70E-07 6.768594106 0.081930216 TEMDKSPFNSPS(ph)PQDSPR ddPTM_A459_MK2206_30min_R2 3 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 TEMDKSPFNS(0.002)PS(0.732)PQDS(0.266)PR;TEMDKSPFNS(0.007)PS(0.947)PQDS(0.047)PR;TEMDKS(0.002)PFNS(0.096)PS(0.815)PQDS(0.087)PR 97.589 0.001913 50198700 105032 175750 132898 165705 172720 146271 178390 124019 145176 138492 TRUE FALSE 113073.3307 167022.5106 137328.753 152166.3714 165938.145 151837.4454 154967.1787 140228.7091 157803.1461 133973.0174 0.844000776 1.246687683 1.025047847 1.135798644 1.238593772 1.133343477 1.1567044 1.046693669 1.177872598 1 17.03158294 -4.746753393 24.99119699 1.131825246 0.844000021 0.535328627 0.079609702 593.1456125 1009301.355 0.018707866 0.412030556 1.79E-05 4.746753393 -0.287825226 TEMDKSPFNSPSPQDS(ph)PR ddPTM_A459_MK2206_30min_R2 1 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 TEMDKSPFNS(0.007)PS(0.034)PQDS(0.959)PR 101.48 0.0013934 6859700 11908 16531 15473 16915 17301 16229 19490 15140 15154 16306 TRUE FALSE 12819.68564 15710.09458 15988.8621 15532.99039 16621.67581 16846.60597 16930.93959 17118.84998 16472.06753 15773.93656 0.812713148 0.995952692 1.013625359 0.984725045 1.053743037 1.068002645 1.073349036 1.08526175 1.044258513 1 13.94525512 -3.905391316 0.912033458 1.052797804 7.12E-13 0.830130233 0.030815175 3.55009548 0.714723413 0.010678106 5.431726664 0.000124339 3.905391316 -1.052797804 TEMQDNTYPEILR ddPTM_A459_MK2206_30min_R1 1 TEMQDNTYPEILR 13 0 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 0 184.36 0.018193 3806200 803.41 901.25 862.59 734.52 867.36 775.44 699.06 809.51 595.08 656.4 FALSE TRUE 735.0757606 842.5784612 804.0397941 791.0928577 832.8112145 819.3447427 652.4269829 802.4325394 656.9406955 737.7197876 0.996415947 1.142138893 1.089898641 1.072348703 1.128899114 1.110644931 0.884383195 1.087719962 0.89050166 1 9.526929123 -7.237758641 24.98028055 0.972961193 1.093378374 0.465437682 0.065069062 673.5200806 710482.2305 0.023094007 0.017878304 5.78E-08 7.237758641 0.120417181 TENLLGS(ph)YFPK ddPTM_A459_MK2206_30min_R2 1 TENLLGSYFPK 11 0 Q06323-3;Q06323;Q06323-2 Q06323-3 PSME1 Proteasome activator complex subunit 1 1 T(0.008)ENLLGS(0.992)YFPK 85.536 0.041692 0 9674.5 13136 11849 13050 11881 10429 13921 10133 11179 10606 TRUE FALSE 10415.18716 12483.68534 12244.03975 11983.77326 11414.49224 10825.8829 12093.15598 11457.41789 12151.32921 10259.92709 1.015132668 1.216742111 1.193384674 1.16801739 1.112531516 1.055161777 1.178678549 1.116715333 1.184348496 1 13.32473286 -6.270089683 23.1823407 1.114643129 1.156425522 0.062519879 0.071239959 687.0726195 1841316.079 0.021439788 0.024733219 5.37E-07 6.270089683 0.041782394 TENNDHINLK ddPTM_A459_MK2206_30min_R1 1 TENNDHINLK 10 0 P61956-2;P61956 P61956-2 SUMO2 Small ubiquitin-related modifier 2 0 99.343 0.026126 8343000 11349 12125 12003 10237 11857 11111 11396 11147 10793 10443 FALSE TRUE 10383.70795 11335.6603 11188.2698 11025.45551 11384.71058 11740.09522 10635.79363 11049.54295 11914.97097 11736.75768 0.884716907 0.965825538 0.953267513 0.939395344 0.97000474 1.000284366 0.906195214 0.941447651 1.015184201 1 13.51874629 -1.522878745 0.117003042 1.009570329 0.745168299 0.306228123 0.033027167 154.2353301 1.251111689 0.257850154 6.623494076 0.03 1.522878745 -0.26440203 TENNDHINLK ddPTM_A459_MK2206_30min_R2 4 TENNDHINLK 10 0 P61956-2;P61956 P61956-2 SUMO2 Small ubiquitin-related modifier 2 0 ;;; 107.55 0.015763 33982500 374646 413569 367471 482685 466988 369313 424569 378845 356079 433223 FALSE TRUE 403329.1858 393031.7648 379722.2997 443248.0915 448651.7047 383367.465 368822.5803 428361.3423 387050.1078 419086.969 0.96239973 0.937828646 0.906070405 1.05765181 1.070545586 0.914768278 0.880062153 1.022129949 0.923555578 1 18.67689014 -6.390079587 0.002001955 1.932330664 2.03E-06 0.007885816 0.062856585 1039104.584 638.4746493 305926.1604 310338.7763 4.07E-07 6.390079587 -1.932328634 TENSLANENQQPIKS(ph)EPESEGEEPK ddPTM_A459_MK2206_30min_R2 1 TENSLANENQQPIKSEPESEGEEPK 25 1 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;A0A0C4DGG3 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 TENSLANENQQPIKS(0.747)EPES(0.253)EGEEPK 71.002 0.013168 0 7189.8 6774.4 10147 4794.1 5816.7 4501 10142 8683.5 3225.2 8732 TRUE FALSE 7740.256616 6437.993147 10485.29592 4402.406694 5588.307131 4672.288709 8810.343217 9818.463265 3505.722066 8447.075555 0.916323829 0.762156453 1.241293019 0.521175248 0.661567083 0.553125005 1.043005139 1.162350591 0.415021985 1 13.04423624 -10.70305595 4.241737358 1.000049018 0.816844929 0.043857611 0.265726798 380105002.8 25.57226573 226454.5222 0.064174345 1.98E-11 10.70305595 -0.183204089 TEPAAEAEAASGPS(ph)ESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR ddPTM_A459_MK2206_30min_R1 2 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR 46 0 P55884;P55884-2 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 TEPAAEAEAAS(0.008)GPS(0.33)ES(0.33)PS(0.33)PPAAEELPGS(0.001)HAEPPVPAQGEAPGEQAR;TEPAAEAEAAS(0.01)GPS(0.447)ES(0.447)PS(0.089)PPAAEELPGS(0.007)HAEPPVPAQGEAPGEQAR 114.49 3.00E-28 110263700 3950.15 4326.62 4207.05 3438.99 4084.97 3665.44 3808.23 3827.81 3430.31 3478.4 TRUE FALSE 3614.168999 4044.956252 3921.487168 3703.861606 3922.256995 3872.974045 3554.189925 3794.343861 3786.903 3909.330453 0.924498208 1.034692846 1.003109667 0.947441423 1.003306587 0.990700094 0.909155664 0.970586628 0.968683268 1 11.93270582 TEPAAEAEAASGPS(ph)ESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR ddPTM_A459_MK2206_30min_R2 1 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR 46 0 P55884;P55884-2 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 TEPAAEAEAAS(0.021)GPS(0.32)ES(0.32)PS(0.32)PPAAEELPGS(0.018)HAEPPVPAQGEAPGEQAR 77.954 3.94E-13 44315000 41939 55025 42423 55462 67662 64475 48922 52101 47586 50365 TRUE FALSE 45149.88209 52292.53851 43837.36165 50930.57719 65005.24991 66928.6413 42498.48263 58910.77959 51724.94426 48721.59417 0.926691395 1.073292847 0.899752202 1.04533889 1.334218451 1.373695636 0.872272005 1.209130789 1.0616431 1 15.57227372 -6.008142945 24.30752389 1.153978901 0.976466072 0.224070962 0.145991646 406.0735477 1212181.513 0.042612714 0.05998152 9.81E-07 6.008142945 -0.177512829 TEPAAEAEAASGPSES(ph)PSPPAAEELPGSHAEPPVPAQGEAPGEQAR ddPTM_A459_MK2206_30min_R1 2 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR 46 0 P55884;P55884-2 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 TEPAAEAEAAS(0.003)GPS(0.11)ES(0.429)PS(0.429)PPAAEELPGS(0.029)HAEPPVPAQGEAPGEQAR;TEPAAEAEAAS(0.003)GPS(0.388)ES(0.507)PS(0.102)PPAAEELPGSHAEPPVPAQGEAPGEQAR 126.06 1.69E-43 117389000 4616 4730.03 4791.48 3926.15 4524.1 4209.3 4665.8 4291.39 3758.25 3200.25 TRUE FALSE 4223.38496 4422.104187 4466.247687 4228.542753 4343.895517 4447.626928 4354.552995 4253.87083 4148.933537 3596.721131 1.174231976 1.229482083 1.241755345 1.175666002 1.207737648 1.236578196 1.210700757 1.182707993 1.153532172 1 11.81246659 -8.844480989 1.12075401 1.000029482 1.212457423 0.89241427 0.021836153 0.326578126 0.709027844 0.021201383 0.006607428 1.43E-09 8.844480989 0.212427941 TEPAAEAEAASGPSESPS(ph)PPAAEELPGSHAEPPVPAQGEAPGEQAR ddPTM_A459_MK2206_30min_R2 2 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR 46 0 P55884;P55884-2 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 TEPAAEAEAAS(0.023)GPS(0.208)ES(0.06)PS(0.655)PPAAEELPGS(0.054)HAEPPVPAQGEAPGEQAR;TEPAAEAEAAS(0.007)GPS(0.148)ES(0.151)PS(0.544)PPAAEELPGS(0.151)HAEPPVPAQGEAPGEQAR 80.601 2.29E-13 51205600 16050.3 23597.6 19272.7 24245.9 21586.8 23123.8 21568.7 15199.9 20189.7 16140.9 TRUE FALSE 17279.12331 22425.7775 19915.2422 22264.93241 20739.19377 24003.79241 18736.70378 17186.57912 21945.76361 15614.22375 1.10662711 1.436240306 1.275455156 1.425939116 1.328224451 1.537302961 1.199976642 1.100700194 1.405498215 1 13.93057323 -9.469873724 0.500226757 0.972092098 1.340149237 0.305899401 0.138658706 4.670924268 1.508344724 0.429927528 0.069410056 3.39E-10 9.469873724 0.36805714 TEPEGLRPAS(ph)PLALTQEQLADLK ddPTM_A459_MK2206_30min_R1 1 TEPEGLRPASPLALTQEQLADLK 23 1 P10070-4;P10070-2 P10070-4 GLI2 Zinc finger protein GLI2 1 TEPEGLRPAS(0.999)PLALT(0.001)QEQLADLK 83.179 0.00020643 2906900 682.55 554.43 626.91 489.64 481.64 661.07 655.44 785.81 864.57 1136.7 TRUE FALSE 624.4955383 518.3365062 584.3570959 527.3521576 462.4552589 698.4992121 611.7167935 778.939746 954.4451454 1277.522978 0.488833116 0.405735564 0.457414157 0.412792699 0.361993692 0.546760586 0.478830365 0.609726603 0.74710605 1 10.31913352 -8.407199019 0.867851554 1.00103332 0.430551199 0.940532571 0.044785449 0.123241449 0.206021862 0.041795243 0.015065735 3.92E-09 8.407199019 -0.570482121 down TEPEGLRPAS(ph)PLALTQEQLADLK ddPTM_A459_MK2206_30min_R2 1 TEPEGLRPASPLALTQEQLADLK 23 1 P10070-4;P10070-2 P10070-4 GLI2 Zinc finger protein GLI2 1 T(0.006)EPEGLRPAS(0.993)PLALT(0.001)QEQLADLK 62.291 0.004278 6569400 26778 20273 20527 20796 22627 14274 22176 17144 14235 25245 TRUE FALSE 28828.14427 19266.2723 21211.35993 19096.90028 21738.55029 14817.20707 19264.26456 19384.77966 15473.13457 24421.25772 1.180452891 0.788914008 0.868561324 0.781978574 0.890148679 0.606733987 0.788831795 0.793766639 0.633592862 1 14.57584988 -2.636755364 1.429160622 0.779399837 199.9882698 0.511392832 0.110994013 538.715189 2.917024066 0.029707895 350031.8604 0.002308047 2.636755364 199.20887 TEPEQGTLYSPEQTS(ph)LHESEGSLGNSR ddPTM_A459_MK2206_30min_R1 1 TEPEQGTLYSPEQTSLHESEGSLGNSR 27 0 Q99569-2;Q99569;A0A0D9SF60;H0YFB1;E7EST6 Q99569-2 PKP4 Plakophilin-4 1 TEPEQGTLYSPEQT(0.03)S(0.956)LHES(0.01)EGS(0.004)LGNSR 114.88 5.66E-12 2989100 325.52 302.39 318.97 91.487 566.48 416.1 415.94 408.46 371.42 394.71 TRUE FALSE 297.8328146 282.704356 297.3192051 98.53334459 543.9159021 439.6592224 388.1934015 404.8888773 410.0304381 443.6096547 0.67138488 0.637281793 0.670227084 0.222117223 1.226113761 0.991094801 0.875078794 0.912714304 0.924304586 1 8.793146954 -6.269583948 24.99946222 0.978340324 0.565038696 0.670901045 0.150033839 395.471599 1213883.882 0.047238065 0.054479956 5.38E-07 6.269583948 -0.413301628 TEPEQGTLYSPEQTS(ph)LHESEGSLGNSR ddPTM_A459_MK2206_30min_R2 3 TEPEQGTLYSPEQTSLHESEGSLGNSR 27 0 Q99569-2;Q99569;A0A0D9SF60;H0YFB1;E7EST6 Q99569-2 PKP4 Plakophilin-4 1 TEPEQGTLYSPEQT(0.027)S(0.971)LHES(0.002)EGS(0.001)LGNSR;TEPEQGTLYSPEQT(0.037)S(0.948)LHES(0.011)EGS(0.004)LGNSR;TEPEQGTLYSPEQT(0.014)S(0.986)LHESEGSLGNSR 170.59 7.56E-22 7806300 6500 9596.3 8568.1 17311.7 14294.9 16763.5 14851.1 9253.7 15609.3 9653.1 TRUE FALSE 6997.644998 9119.761696 8853.756178 15897.27873 13733.6104 17401.44674 12901.13273 10463.19036 16966.9687 9338.120138 0.749363351 0.976616445 0.948130464 1.702406748 1.470703974 1.863484993 1.38155566 1.120481447 1.816957637 1 13.18891643 -5.70085462 7.437967003 1.495473745 0.893705734 0.504778134 0.26669145 0.184412322 18.98998661 0.070682264 0.122405046 1.99E-06 5.70085462 -0.601768011 TEPS(ph)SPLSDPSDIIR ddPTM_A459_MK2206_30min_R2 2 TEPSSPLSDPSDIIR 15 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 T(0.001)EPS(0.485)S(0.485)PLS(0.028)DPS(0.002)DIIR;TEPS(0.532)S(0.366)PLS(0.102)DPSDIIR 111.88 0.0031462 4713900 21371 21967 23241 23813 22867.6 23457 28320 21291.5 20868.4 26083 TRUE FALSE 23007.18019 20876.15072 24015.84334 21867.40173 21969.70312 24349.67257 24601.54998 24074.37215 22683.49571 25231.91385 0.911828581 0.827370878 0.95180427 0.866656484 0.870710928 0.965034706 0.9750172 0.954123904 0.899000205 1 14.62296202 -6.764400184 24.9995634 0.956791831 0.885052499 0.475512289 0.038285858 70.46026296 594927.1218 0.012856177 0.011832593 1.72E-07 6.764400184 -0.071739332 TEPSS(ph)PLSDPSDIIR ddPTM_A459_MK2206_30min_R1 1 TEPSSPLSDPSDIIR 15 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 TEPS(0.012)S(0.985)PLS(0.003)DPSDIIR 149.32 0.00028744 4566100 1248.1 1487.5 1272.8 1123.6 1155.5 1502.4 1430.8 1101.8 1259.8 1370.2 TRUE FALSE 1141.942541 1390.66348 1186.405882 1210.139867 1109.473988 1587.46459 1335.353943 1092.167079 1390.760718 1539.95072 0.74154486 0.903057131 0.770418083 0.785830255 0.720460709 1.030854149 0.867140698 0.709222097 0.903120275 1 10.58866847 -6.715503081 24.9999992 0.881712757 0.790180011 0.271570284 0.093292945 225.536709 122743.4611 0.031443595 0.031443479 1.93E-07 6.715503081 -0.091532746 TEPSS(ph)PLSDPSDIIR ddPTM_A459_MK2206_30min_R2 3 TEPSSPLSDPSDIIR 15 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 TEPS(0.048)S(0.951)PLS(0.001)DPSDIIR;TEPS(0.122)S(0.874)PLS(0.004)DPSDIIR;TEPS(0.174)S(0.811)PLS(0.014)DPSDIIR 172.58 3.81E-05 50997600 92036 83222 87558 89594 95802 87288 115491 92624.2 77617.1 103915 TRUE FALSE 99082.34692 79089.3165 90477.14002 82273.8836 92040.33211 90609.80601 100326.893 104730.501 84368.09506 100524.2621 0.985656049 0.786768437 0.900052765 0.818448024 0.915603161 0.901372506 0.998036602 1.041843022 0.839280919 1 16.61718422 -6.965417845 2.277024419 0.972017014 0.871793778 0.252727477 0.070743773 0.387823068 4.060591908 0.028363642 0.022904499 1.08E-07 6.965417845 -0.100223235 TEPTS(ph)PTPSAFK ddPTM_A459_MK2206_30min_R1 2 TEPTSPTPSAFK 12 0 Q86XN7-2;Q86XN7 Q86XN7-2 PROSER1 Proline and serine-rich protein 1 1 TEPT(0.118)S(0.815)PT(0.067)PSAFK;TEPT(0.002)S(0.93)PT(0.067)PSAFK 189.24 0.00012852 43064000 9802.2 10574.1 9359.4 7399.1 7669 7263.7 7691.8 7039.5 7940.8 7729 TRUE FALSE 8968.471417 9885.724168 8724.110005 7968.979964 7363.527491 7674.964417 7178.694056 6977.954394 8766.274576 8686.526871 1.032457684 1.138052563 1.004326601 0.91739542 0.847695241 0.883548112 0.826417067 0.803307754 1.00918062 1 13.08456375 -5.660242849 2.558396195 0.881637679 1.084906571 0.545283083 0.068672774 0.182319311 2.406953066 0.019179094 0.038047718 2.19E-06 5.660242849 0.203268892 TEPTS(ph)PTPSAFK ddPTM_A459_MK2206_30min_R2 2 TEPTSPTPSAFK 12 0 Q86XN7-2;Q86XN7 Q86XN7-2 PROSER1 Proline and serine-rich protein 1 1 TEPT(0.003)S(0.98)PT(0.016)PS(0.001)AFK;TEPT(0.001)S(0.898)PT(0.099)PS(0.002)AFK 127.52 0.0025814 41716000 438770 442740 415340 415640 404440 337120 454310 337710 333270 436410 TRUE FALSE 472362.5686 420754.1754 429187.2283 381680.8824 388559.6535 349949.3378 394658.5513 381849.8565 362257.2222 422169.9774 1.118891901 0.99664637 1.016621861 0.904092908 0.92038675 0.828929949 0.934833296 0.904493159 0.858083809 1 18.68746446 -4.974756994 0.890737535 0.898508514 1.180008936 0.641295795 0.048657057 1.02909617 0.780623645 0.016902542 0.266536808 1.06E-05 4.974756994 0.281500422 TEQELPRPQS(ph)PSDLDSLDGR ddPTM_A459_MK2206_30min_R1 2 TEQELPRPQSPSDLDSLDGR 20 1 P54259 P54259 ATN1 Atrophin-1 1 TEQELPRPQS(0.917)PS(0.076)DLDS(0.007)LDGR;T(0.001)EQELPRPQS(0.5)PS(0.489)DLDS(0.011)LDGR 101.2 0.00039293 30588000 3578.4 3404.9 3290.4 3078.7 3203.9 3261.1 3162.6 3671.6 3149.9 2794.4 TRUE FALSE 3274.038289 3183.240391 3067.056816 3315.822007 3076.281879 3445.740664 2951.628724 3639.499588 3477.343377 3140.591369 1.042491017 1.013579934 0.976585762 1.055795428 0.979523127 1.097163005 0.939832146 1.15885805 1.107225668 1 11.61682053 -7.769065651 24.99810934 1.099781371 1.016829172 0.261633968 0.055751785 202.154341 662627.0796 0.027502678 0.013617466 1.70E-08 7.769065651 -0.082952199 TEQELPRPQS(ph)PSDLDSLDGR ddPTM_A459_MK2206_30min_R2 3 TEQELPRPQSPSDLDSLDGR 20 1 P54259 P54259 ATN1 Atrophin-1 1 TEQELPRPQS(0.858)PS(0.141)DLDSLDGR;TEQELPRPQS(0.998)PS(0.002)DLDSLDGR;TEQELPRPQS(0.631)PS(0.369)DLDSLDGR 130.72 9.02E-05 39045500 34572 44101.5 41509 48334.3 42475.3 44802 45551.7 35829.8 41571.4 39780.3 TRUE FALSE 37218.8589 41911.48364 42892.88934 44385.23308 40807.5063 46506.9715 39570.70707 40512.87788 45187.20523 38482.27207 0.967168956 1.089111463 1.114614264 1.153394295 1.060423517 1.208529772 1.028284063 1.052767306 1.174234337 1 15.23190636 -4.762845666 4.247924105 1.102853259 0.95422494 0.280420213 0.062774273 0.278784041 10.20069697 0.014942276 0.129156257 1.73E-05 4.762845666 -0.148628319 TEQGDSAVYLCAS(ph)SL ddPTM_A459_MK2206_30min_R1 1 TEQGDSAVYLCASSL 15 0 A0A1B0GX95 A0A1B0GX95 1 TEQGDS(0.001)AVYLCAS(0.996)S(0.003)L 90.412 0.015592 16677000 3444.6 1566 1931.4 3629 2039.5 2964.6 2016 1590.6 1159.1 1150.5 TRUE FALSE 3151.618682 1464.053115 1800.301949 3908.506209 1958.262396 3132.45309 1881.516318 1576.693552 1279.592593 1293.032626 2.437385275 1.132263089 1.392309763 3.022743689 1.514472533 2.422563072 1.455118982 1.219376465 0.989605805 1 10.33654296 -7.573431109 3.127083366 1.072480256 1.948459226 0.374542543 0.532605415 0.296805429 5.923254727 0.281495169 0.153171506 2.67E-08 7.573431109 0.87597897 TERLEVS(ph)YQGLDIENQR ddPTM_A459_MK2206_30min_R1 1 TERLEVSYQGLDIENQR 17 1 Q3V6T2;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;Q3V6T2-5;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y4W8;A0A2R8YG73;A0A2R8Y4X4;A0A2R8YGU1;A0A2R8YG52;A0A087WXD9 Q3V6T2 CCDC88A Girdin 1 T(0.145)ERLEVS(0.853)Y(0.001)QGLDIENQR 68.625 0.019875 28164000 5646.8 1026 1278.9 1523.6 15449 13927 11473 4321.8 706.18 719.85 TRUE FALSE 5166.510007 959.2072135 1192.091831 1640.947936 14833.63362 14715.5347 10707.6571 4284.014958 779.5899381 809.0304526 6.386051342 1.185625597 1.473482027 2.028289455 18.33507449 18.18909864 13.23517189 5.295245617 0.963610128 1 9.660050198 -3.736162941 14.17861508 7.305425797 0.171993928 0 6.778231026 0 0 1.735105954 0 0.000183585 3.736162941 -7.133431869 TES(ph)GEETDLISPPQEEVK ddPTM_A459_MK2206_30min_R1 2 TESGEETDLISPPQEEVK 18 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 TES(1)GEETDLISPPQEEVK;T(0.022)ES(0.978)GEETDLISPPQEEVK 300.54 1.24E-95 32038000 2574.54 4131.5 3354.3 2856.2 3038.2 2403.01 4108.8 3609.1 4694.8 4425.6 TRUE FALSE 2355.561854 3862.538599 3126.619462 3076.185019 2917.182061 2539.06635 3834.709449 3577.546019 5182.841261 4973.87674 0.473586696 0.776565002 0.628608151 0.618468285 0.586500674 0.510480352 0.770969939 0.719267124 1.042012404 1 12.28015504 -8.064891076 1.633332807 1.032393709 0.615453542 0.744212345 0.091658918 0.188320966 0.897305627 0.079693539 0.025652086 8.61E-09 8.064891076 -0.416940167 TES(ph)GEETDLISPPQEEVK ddPTM_A459_MK2206_30min_R2 2 TESGEETDLISPPQEEVK 18 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 T(0.061)ES(0.897)GEET(0.042)DLISPPQEEVK;T(0.151)ES(0.828)GEET(0.02)DLISPPQEEVK 140.75 0.00031552 34596000 41953 31094.2 41092 29524.7 36496 27877.1 51562 32400 37559 48699 TRUE FALSE 45164.95394 29550.10724 42461.98677 27112.43757 35062.98366 28937.98257 44791.84746 36634.79125 40825.81393 47109.95562 0.958713574 0.627258227 0.901337864 0.57551397 0.744279701 0.614264696 0.950793667 0.777644359 0.866606928 1 15.52374435 -8.421674882 0.804035818 0.994046947 0.743153047 0.252208332 0.128537808 0.849712245 1.235267084 0.117662639 0.044012045 3.79E-09 8.421674882 -0.2508939 TES(ph)PATAAETASEELDNR ddPTM_A459_MK2206_30min_R1 5 TESPATAAETASEELDNR 18 0 C9JR83;Q9NTJ3-2;Q9NTJ3;C9JWF0;C9IYK2;C9JJ64 C9JR83 SMC4 Structural maintenance of chromosomes protein 4 1 T(0.001)ES(0.997)PAT(0.002)AAETASEELDNR;T(0.001)ES(0.997)PAT(0.001)AAETASEELDNR;T(0.012)ES(0.862)PAT(0.126)AAETASEELDNR;T(0.002)ES(0.998)PATAAETASEELDNR;T(0.011)ES(0.989)PATAAETASEELDNR 333.65 1.83E-144 876468300 10117.58 11550.98 10950.6 9379.89 9542.8 9490 11028.2 9930.75 9969.17 9560.8 TRUE FALSE 9257.026691 10799.0091 10207.30378 10102.33075 9162.690069 10027.3156 10292.5289 9843.9265 11005.5009 10745.26408 0.861498295 1.00500174 0.949935125 0.940165888 0.852718928 0.933184659 0.957866537 0.916117689 1.024218745 1 13.39141332 -8.262022544 24.99363442 1.012109381 0.929611314 0.389653242 0.042481142 55.57156293 2381416.525 0.033911179 0.010773559 5.47E-09 8.262022544 -0.082498067 TES(ph)PATAAETASEELDNR ddPTM_A459_MK2206_30min_R2 8 TESPATAAETASEELDNR 18 0 C9JR83;Q9NTJ3-2;Q9NTJ3;C9JWF0;C9IYK2;C9JJ64 C9JR83 SMC4 Structural maintenance of chromosomes protein 4 1 T(0.002)ES(0.686)PAT(0.308)AAET(0.002)AS(0.002)EELDNR;T(0.033)ES(0.963)PAT(0.004)AAETASEELDNR;T(0.001)ES(0.996)PAT(0.003)AAETASEELDNR;TES(1)PATAAETASEELDNR;T(0.275)ES(0.666)PAT(0.049)AAET(0.004)AS(0.006)EELDNR;T(0.005)ES(0.994)PAT(0.001)AAETASEELDNR;T(0.025)ES(0.768)PAT(0.201)AAET(0.005)AS(0.001)EELDNR;T(0.127)ES(0.87)PAT(0.003)AAETASEELDNR 313.76 9.00E-112 538375400 525090.1 515142 504337.4 535860.7 514764.5 481613.3 594823.1 471736.7 414844.5 576361.2 TRUE FALSE 565291.4018 489560.7974 521151.7572 492079.1667 494552.2592 499941.4316 516722.1125 533394.3064 450926.9247 557554.5812 1.013876346 0.878049995 0.934709847 0.882566807 0.887002414 0.896668144 0.926765073 0.956667427 0.808758353 1 19.08875352 -4.316665628 0.001431767 1.821266275 6.41E-05 0.003489628 0.058178643 4570688.075 893.4254504 561477.2184 575020.0765 4.82E-05 4.316665628 -1.821202139 TES(ph)PQGLPTVQR ddPTM_A459_MK2206_30min_R2 1 TESPQGLPTVQR 12 0 F5H212;P15822;A0A0D9SFF3;P15822-2;P15822-3 F5H212 HIVEP1 Zinc finger protein 40 1 T(0.227)ES(0.769)PQGLPT(0.004)VQR 147.7 0.00062272 7983800 39821 45022 32669 43982 41816 41243 56340 37502 40191 42176 TRUE FALSE 42869.72638 42786.27295 33758.16815 40388.52991 40174.09373 42812.53127 48942.49032 42403.64016 43686.74053 40799.80057 1.050733724 1.048688286 0.827410127 0.989919787 0.984663973 1.049331876 1.199576705 1.039309986 1.070758678 1 15.31627448 -6.837514601 3.891548513 1.08561758 0.975471512 0.271919891 0.074925528 0.285425992 8.41812292 0.027983099 0.024969834 1.45E-07 6.837514601 -0.110146068 TES(ph)STEGKEQEEK ddPTM_A459_MK2206_30min_R1 1 TESSTEGKEQEEK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 TES(0.594)S(0.376)T(0.03)EGKEQEEK 198.16 0.00074299 3570600 2230.9 2171.8 2354.8 2047 1356 1463.6 2065.2 2396.6 673.58 1747.2 TRUE FALSE 2041.15024 2030.415425 2194.962737 2204.660295 1301.987649 1546.467767 1927.434276 2375.646779 743.6010514 1963.656327 1.039464092 1.033997343 1.117793734 1.122732254 0.663042525 0.787545023 0.981553773 1.20980782 0.378681871 1 10.93932674 -6.234753252 24.60205789 0.852039954 1.078125267 0.240844212 0.209192906 989.9352795 912625.1749 0.061007849 0.078736496 5.82E-07 6.234753252 0.226085313 TES(ph)VPSDINNPVDR ddPTM_A459_MK2206_30min_R1 2 TESVPSDINNPVDR 14 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0;A8MY87 KSR1 Kinase suppressor of Ras 1 1 T(0.001)ES(0.959)VPS(0.04)DINNPVDR;T(0.098)ES(0.882)VPS(0.02)DINNPVDR 240.5 1.49E-19 68567000 5841.3 6094.3 5268.9 4470.1 5258.7 4418.9 5294 5405.9 5229.7 4931 TRUE FALSE 5344.466761 5697.559962 4911.261748 4814.387877 5049.234844 4669.094299 4940.846919 5358.636786 5773.34603 5541.889507 0.964376275 1.02808978 0.886207085 0.868726789 0.911103485 0.842509453 0.891545548 0.96693317 1.041764911 1 12.43616223 -7.994194175 4.096827341 1.018452896 0.912417276 0.428503247 0.049972197 0.222054208 8.606639441 0.036939965 0.014819767 1.01E-08 7.994194175 -0.106035619 TES(ph)VPSDINNPVDR ddPTM_A459_MK2206_30min_R2 4 TESVPSDINNPVDR 14 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0;A8MY87 KSR1 Kinase suppressor of Ras 1 1 T(0.002)ES(0.676)VPS(0.323)DINNPVDR;T(0.135)ES(0.44)VPS(0.425)DINNPVDR;T(0.04)ES(0.944)VPS(0.016)DINNPVDR;TES(0.952)VPS(0.048)DINNPVDR 174.59 8.30E-05 84643000 72650 87793 82812 87033 83279 72499.6 84120 70105 66897.6 63851.6 TRUE FALSE 78212.13986 83433.32728 85572.91075 79922.1255 80009.04802 75258.62308 73074.94295 79267.96421 72716.23232 61768.12752 1.266221642 1.35075047 1.385389426 1.29390559 1.295312829 1.218405448 1.183052585 1.283314994 1.177245211 1 15.91457498 -9.922117304 0.195281745 0.816338227 1.384097837 0.805579546 0.045587494 5.839507067 0.3365788 0.806746971 0.169936737 1.20E-10 9.922117304 0.56775961 TESGYGSESS(ph)LRR ddPTM_A459_MK2206_30min_R1 2 TESGYGSESSLRR 13 1 A0A2U3TZL3;Q9Y5P4;Q9Y5P4-3;A0A2R8YCI0;A0A2R8YFI2;A0A2R8YEA4;A0A2R8Y5H3;A0A2R8Y7Q9;A0A2R8YEK8;A0A2R8YE18;A0A2R8Y5S9;A0A2R8Y7C5;Q9Y5P4-2 A0A2U3TZL3 COL4A3BP Collagen type IV alpha-3-binding protein 1 TESGYGS(0.011)ES(0.438)S(0.551)LRR;TESGYGSES(0.005)S(0.995)LRR 115.34 0.0072239 9545600 4712.1 3704.4 4175.3 3147.6 3216.8 3332.4 4519.9 3488.6 3276.5 4081.5 TRUE FALSE 4311.311151 3463.242887 3891.892269 3390.028697 3088.668044 3521.077608 4218.385718 3458.099538 3617.1039 4587.147034 0.93986766 0.754988419 0.848434166 0.739027695 0.673330944 0.767596413 0.919609877 0.753867167 0.788530185 1 12.16338144 -10.42508244 8.346899871 1 0.794488596 0.372462011 0.078373897 1.64E-10 6.84E-11 0.07667088 0.01859542 3.76E-11 10.42508244 -0.205511404 TESIT(ph)ATSPASMVGGKPGSFR ddPTM_A459_MK2206_30min_R1 1 TESITATSPASMVGGKPGSFR 21 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 T(0.006)ES(0.066)IT(0.34)AT(0.34)S(0.248)PASMVGGKPGSFR 71.002 0.007938 32307000 621.29 568.46 783.99 664.23 695.71 812.23 950.68 831.55 701.71 847.5 TRUE FALSE 568.446023 531.4531507 730.7749431 715.3891097 667.9983975 858.2177607 887.2618718 824.279846 774.6552656 952.4946983 0.596797047 0.557959169 0.767222058 0.751068863 0.701314557 0.901021037 0.931513712 0.865390482 0.813290895 1 9.895567252 -3.945067875 0.255503859 0.968723836 9.48E-14 0.777975484 0.063868552 7.140124033 0.280166188 0.090173787 2.336076785 0.000113483 3.945067875 -0.968723836 TESIT(ph)ATSPASMVGGKPGSFR ddPTM_A459_MK2206_30min_R2 1 TESITATSPASMVGGKPGSFR 21 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 T(0.046)ES(0.01)IT(0.644)AT(0.165)S(0.134)PAS(0.001)MVGGKPGSFR 91.414 0.00091996 21174000 13415 17163 17359 17759 18804 15533 17690 14692 14267 20156 TRUE FALSE 14442.06271 16310.71038 17937.7404 16308.03289 18065.66048 16124.1192 15367.28175 16612.29485 15507.91787 19498.31137 0.740682741 0.836519126 0.919963788 0.836381807 0.926524361 0.826949518 0.78813398 0.851986335 0.795346714 1 14.25106157 -4.794311123 4.011926877 0.86048738 0.73169745 0.268182812 0.062200728 0.30266174 9.068565374 0.015031141 0.109657244 1.61E-05 4.794311123 -0.12878993 TESITAT(ph)SPASMVGGKPGSFR ddPTM_A459_MK2206_30min_R1 1 TESITATSPASMVGGKPGSFR 21 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 T(0.02)ES(0.02)IT(0.011)AT(0.475)S(0.475)PASMVGGKPGSFR 171.29 2.37E-10 32232000 1184.4 1216.5 1422.3 867.94 1460.3 1168.7 1425.2 1647.7 1723.3 1330.7 TRUE FALSE 1083.66056 1137.305629 1325.758239 934.7888892 1402.133159 1234.870784 1330.127508 1633.294333 1902.443202 1495.557162 0.724586521 0.760456141 0.886464438 0.625043905 0.937532308 0.825692802 0.889385937 1.092097563 1.272063181 1 10.54646734 -7.685321681 2.28795584 1.152691597 0.794754744 0.677376099 0.101350042 0.16936736 1.771469071 0.062268642 0.028583045 2.06E-08 7.685321681 -0.357936853 TESITAT(ph)SPASMVGGKPGSFR ddPTM_A459_MK2206_30min_R2 1 TESITATSPASMVGGKPGSFR 21 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 T(0.01)ES(0.028)IT(0.148)AT(0.483)S(0.315)PAS(0.016)MVGGKPGSFR 64.331 0.015146 21718000 11794 13617 16748 14334 12107 10770 13454 17498 11424 19732 TRUE FALSE 12696.95771 12940.79958 17306.36996 13162.86635 11631.61835 11179.8599 11687.47364 19785.04868 12417.63887 19088.14646 0.665174994 0.677949512 0.906655342 0.689583265 0.609363427 0.585696465 0.612289604 1.036509685 0.65054189 1 14.2203894 -8.649966763 0.78075277 0.988375423 0.692693154 0.28015892 0.136899862 1.102741409 1.450329376 0.137010493 0.04995683 2.24E-09 8.649966763 -0.295682269 TESITATSPAS(ph)MVGGKPGSFR ddPTM_A459_MK2206_30min_R2 1 TESITATSPASMVGGKPGSFR 21 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 TES(0.001)IT(0.004)AT(0.004)S(0.027)PAS(0.962)MVGGKPGS(0.001)FR 58.864 0.044736 5406200 20329 24215 22565 26677 26101 22844 27552 20082 24752 26198 TRUE FALSE 21885.40387 23012.51831 23317.30584 24497.40376 25076.14359 23713.34443 23934.3893 22706.78635 26904.88422 25343.16141 0.863562502 0.908036608 0.920063029 0.966627777 0.989463911 0.935690068 0.94441214 0.895972921 1.061623046 1 14.62930888 -2.529608032 0.456909278 0.971689644 2.66E-17 0.42454353 0.041588319 37.3841226 1.106011368 0.025725971 30.11985659 0.002953874 2.529608032 -0.971689644 TESS(ph)TEGKEQEEK ddPTM_A459_MK2206_30min_R1 1 TESSTEGKEQEEK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 TES(0.003)S(0.897)T(0.1)EGKEQEEK 174.24 0.00061094 4543500 2156.7 2523.3 2301.7 2018.5 2134.2 2109.3 2006.7 2170.3 1364.7 2233 TRUE FALSE 1973.26134 2359.032711 2145.467017 2173.96522 2049.190295 2228.726743 1872.836704 2151.325296 1506.565449 2509.640898 0.786272387 0.939988152 0.854890044 0.866245534 0.816527295 0.888065996 0.746256847 0.857224353 0.600311164 1 11.29326523 -7.253809531 24.7921119 0.78905012 0.860619057 0.068195911 0.100593248 1187.895073 3859907.315 0.036158469 0.027438916 5.57E-08 7.253809531 0.071568937 TESSPSEASQHS(ph)MQSPQK ddPTM_A459_MK2206_30min_R1 1 TESSPSEASQHSMQSPQK 18 0 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 1 TESSPSEASQHS(0.646)MQS(0.354)PQK 120.15 0.0017951 5261000 2091 1090.4 1520 1123 2338.5 2069.3 2000.1 1662.5 1071.7 1106.4 TRUE FALSE 1913.14947 1019.414762 1416.826635 1209.493655 2245.352593 2186.461978 1866.676978 1647.964938 1183.10705 1243.469185 1.538558006 0.819815058 1.139414352 0.972676822 1.805716314 1.758356383 1.501184751 1.325296162 0.95145667 1 10.28015504 -4.471148554 22.63765321 1.284787242 5.301240608 0.056612562 0.327270844 1280.193443 597524.5586 0.085637698 16716.15258 3.38E-05 4.471148554 4.016453366 TESSPSEASQHSMQS(ph)PQK ddPTM_A459_MK2206_30min_R1 3 TESSPSEASQHSMQSPQK 18 0 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 1 TESSPSEASQHS(0.037)MQS(0.963)PQK;TESSPSEASQHS(0.001)MQS(0.999)PQK;TESSPSEASQHS(0.008)MQS(0.992)PQK 142.27 0.00020033 43228300 14304.7 6352.07 8874.7 5390.89 14420.5 14027 13506.2 11758.7 6355.55 6197.6 TRUE FALSE 13088.01015 5938.549088 8272.31009 5806.097282 13846.10095 14821.19662 12605.22604 11655.89493 7016.232166 6965.405477 1.879001903 0.852577658 1.18762793 0.833561994 1.987838467 2.127829696 1.809690201 1.673397904 1.007297018 1 12.76599162 -6.262414453 24.99999062 1.671453879 1.16417958 0.162866436 0.440155713 136.4948661 3499595.959 0.134269238 0.161191611 5.46E-07 6.262414453 -0.507274299 TESSPSEASQHSMQS(ph)PQK ddPTM_A459_MK2206_30min_R2 8 TESSPSEASQHSMQSPQK 18 0 Q9UQR0 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 1 TESSPSEASQHS(0.002)MQS(0.998)PQK;TESSPSEASQHS(0.002)MQS(0.998)PQK;TESSPSEASQHS(0.148)MQS(0.852)PQK;TESSPS(0.001)EASQHS(0.052)MQS(0.947)PQK;TES(0.001)S(0.001)PS(0.001)EASQHS(0.059)MQS(0.937)PQK;TESSPSEASQHSMQS(1)PQK;TESS(0.002)PS(0.002)EAS(0.001)QHS(0.468)MQS(0.526)PQK;TESSPSEASQHS(0.002)MQS(0.998)PQK 159.1 1.09E-05 117718700 79518.2 161719 125218.1 199465 227800 201049 232234 156951 194444 146633.2 TRUE FALSE 85606.17453 153688.2696 129392.809 183168.0714 218855.4274 208700.0606 201741.3968 177465.0346 211356.3876 141848.5707 0.603503963 1.083467171 0.912189727 1.291293036 1.542880738 1.471287723 1.422230734 1.251087929 1.490014222 1 17.11399209 -5.787277718 3.243073948 1.38741517 0.872927117 0.602045159 0.181453413 0.155653393 3.375372811 0.050171525 0.084862255 1.63E-06 5.787277718 -0.514488053 TESVTSGPMSPEGSPS(ph)KSPSK ddPTM_A459_MK2206_30min_R2 1 TESVTSGPMSPEGSPSKSPSK 21 1 P35612 P35612 ADD2 Beta-adducin 1 TESVTSGPMS(0.001)PEGS(0.005)PS(0.798)KS(0.144)PS(0.053)K 82.859 0.0027608 7224700 75007 65582 63211 57943 54542 36433 74357 59182 41098 76475 TRUE FALSE 80749.59359 62325.29325 65318.42319 53208.87155 52400.40703 37819.48334 64593.83658 66917.2906 44672.62975 73979.62701 1.091511229 0.842465632 0.882924473 0.719236818 0.708308613 0.511214842 0.873130066 0.904536739 0.603850432 1 16.17484041 -4.226931924 1.058055219 0.754228207 1.767019884 0.319618202 0.139215533 5.877938038 2.378213938 0.043602176 8.896101092 5.93E-05 4.226931924 1.012791678 TESVTSGPMSPEGSPSKSPS(ph)K ddPTM_A459_MK2206_30min_R2 2 TESVTSGPMSPEGSPSKSPSK 21 1 P35612 P35612 ADD2 Beta-adducin 1 TESVTS(0.001)GPMS(0.045)PEGS(0.069)PS(0.258)KS(0.258)PS(0.368)K;TESVTSGPMSPEGS(0.001)PS(0.088)KS(0.088)PS(0.823)K 99.371 0.0005648 33914800 52420 49946 58469 48205 41171 29530.8 60056 46257 36866 57727 TRUE FALSE 56433.3155 47465.75427 60418.32728 44266.4973 39554.41967 30654.61529 52170.57506 52302.94872 40072.53804 55843.37272 1.01056424 0.849980077 1.081924754 0.792690254 0.708310006 0.548939181 0.934230375 0.936600821 0.71758807 1 15.76909846 -5.78917125 24.32476693 0.793464747 0.967738694 0.254667209 0.135831238 218.2002635 191391.4865 0.039383533 0.058432525 1.62E-06 5.78917125 0.174273947 TET(ph)PPPLASLNVSK ddPTM_A459_MK2206_30min_R1 2 TETPPPLASLNVSK 14 0 K7ELG9;Q3MHD2;Q3MHD2-2 K7ELG9 LSM12 Protein LSM12 homolog 1 TET(1)PPPLASLNVSK;T(0.002)ET(0.997)PPPLASLNVSK 105.58 0.013552 151042000 8123.6 9214.8 9057.2 6685.9 6225.9 6338.9 8634.4 7028.2 11009.8 12749.7 TRUE FALSE 7432.645161 8614.914845 8442.422499 7200.849176 5977.909219 6697.80304 8058.41493 6966.753188 12154.30811 14329.22909 0.518705166 0.601212723 0.589174927 0.502528722 0.417182891 0.467422427 0.562376027 0.486191765 0.848217865 1 13.80667337 -8.40060861 3.254681004 0.995809757 0.518477647 0.901088282 0.054763352 0.072151945 1.387203561 0.058504247 0.015655864 3.98E-09 8.40060861 -0.477332111 TET(ph)PPPLASLNVSK ddPTM_A459_MK2206_30min_R2 4 TETPPPLASLNVSK 14 0 K7ELG9;Q3MHD2;Q3MHD2-2 K7ELG9 LSM12 Protein LSM12 homolog 1 T(0.462)ET(0.538)PPPLASLNVSK;T(0.074)ET(0.925)PPPLAS(0.001)LNVSK;T(0.317)ET(0.676)PPPLAS(0.007)LNVSK;T(0.229)ET(0.771)PPPLASLNVSK 157.37 0.00073385 171013200 181677 139604 146829 141073 127883 92007 162118 123228 96285 169793 TRUE FALSE 195586.3308 132671.4684 151724.2056 129546.8846 122861.6709 95508.39086 140831.7119 139334.3227 104659.6953 164252.6683 1.190765014 0.807727934 0.923724449 0.788704902 0.748004109 0.581472385 0.857408974 0.848292598 0.637187184 1 17.32555728 -2.00407212 1.069626822 0.775627675 199.9999918 0.485537051 0.119180865 642.4690733 2.012466443 0.035680948 312409.622 0.009906674 2.00407212 199.2243642 TETDS(ph)VGTPQSNGGMR ddPTM_A459_MK2206_30min_R1 1 TETDSVGTPQSNGGMR 16 0 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 TET(0.002)DS(0.951)VGT(0.047)PQSNGGMR 179.55 1.06E-06 3416400 1634.2 1617.2 1413.7 1272.2 1519.4 1486.5 1684.7 1258.1 1179.6 1314.3 TRUE FALSE 1495.202708 1511.919986 1317.741983 1370.185064 1458.879081 1570.664345 1572.316737 1247.100564 1302.223641 1477.125406 1.012238163 1.023555603 0.892098922 0.927602395 0.987647409 1.063324981 1.064443635 0.844275346 0.881593151 1 10.5285766 -7.768432783 24.9999866 0.897200697 0.992575487 0.282096055 0.062825672 216.3605343 773429.408 0.035824586 0.017800434 1.70E-08 7.768432783 0.095374791 TETDSVGT(ph)PQSNGGMR ddPTM_A459_MK2206_30min_R2 1 TETDSVGTPQSNGGMR 16 0 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 TETDS(0.004)VGT(0.892)PQS(0.104)NGGMR 107.73 0.008594 0 12323 14947 14524 13917 12309 15343 12932 13237 11474 14508 TRUE FALSE 13266.45835 14204.75371 15008.22291 12779.93658 11825.68681 15926.88862 11234.01287 14967.12135 12471.98778 14034.60515 0.945267659 1.012123502 1.069372651 0.910601791 0.842609157 1.134829833 0.800450939 1.066444064 0.888659684 1 13.77670085 -5.774580482 24.99779426 0.948963356 1.009241513 0.071833799 0.098562075 614.1038426 1168184.166 0.026350239 0.039350416 1.68E-06 5.774580482 0.060278157 TETEPIPENT(ph)PTK ddPTM_A459_MK2206_30min_R1 2 TETEPIPENTPTK 13 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 TETEPIPENT(0.944)PT(0.056)K;TETEPIPENT(0.867)PT(0.133)K 146.47 0.0013851 0 3543.2 2970.1 2884.6 2682.4 2636 3252.6 3150.7 2447.8 2626.4 3198 TRUE FALSE 3241.832234 2776.74595 2688.801389 2888.998913 2531.002538 3436.759401 2940.522552 2426.399143 2899.423679 3594.192384 0.901964026 0.772564641 0.748096123 0.803796404 0.704192282 0.956197953 0.818131652 0.675088833 0.806696851 1 11.81145192 TEVSETARPS(ph)SPDTR ddPTM_A459_MK2206_30min_R1 1 TEVSETARPSSPDTR 15 1 O75132 O75132 ZBED4 Zinc finger BED domain-containing protein 4 1 TEVSET(0.006)ARPS(0.514)S(0.425)PDT(0.055)R 211.49 4.54E-06 10423000 1647.2 1690 1569 1512.4 1558.2 1648 1875 1665.6 1288.6 1347.2 TRUE FALSE 1507.09699 1579.980693 1462.500651 1628.88531 1496.133594 1741.308336 1749.922171 1651.037835 1422.554581 1514.101307 0.995373945 1.043510554 0.965919945 1.075809989 0.988133084 1.150060652 1.155749726 1.090440796 0.939537252 1 10.56424602 -6.731149067 24.99969251 1.078347351 1.016193501 0.12644184 0.066884504 385.1035225 317838.8778 0.022506444 0.022503447 1.86E-07 6.731149067 -0.06215385 TEVSETARPSS(ph)PDTR ddPTM_A459_MK2206_30min_R1 2 TEVSETARPSSPDTR 15 1 O75132 O75132 ZBED4 Zinc finger BED domain-containing protein 4 1 TEVSET(0.003)ARPS(0.221)S(0.776)PDT(0.001)R;TEVS(0.007)ET(0.029)ARPS(0.204)S(0.754)PDT(0.006)R 109.55 0.01967 9840700 4544.3 4383.2 4694.7 3507.64 4551.2 4461.8 4785 4641.8 3588.7 3483.9 TRUE FALSE 4157.783422 4097.852883 4376.036844 3777.799041 4369.916067 4714.42326 4465.801381 4601.217232 3961.758207 3915.511834 1.061874819 1.046568892 1.117615533 0.964828917 1.11605232 1.204037546 1.140540897 1.175125354 1.011811067 1 11.93498519 -6.486109438 24.9517884 1.123905616 1.051108119 0.127306643 0.070173338 913.9910594 620238.1212 0.021112808 0.02393293 3.27E-07 6.486109438 -0.072797497 TEVSETARPSS(ph)PDTR ddPTM_A459_MK2206_30min_R2 1 TEVSETARPSSPDTR 15 1 O75132 O75132 ZBED4 Zinc finger BED domain-containing protein 4 1 TEVSETARPS(0.027)S(0.75)PDT(0.223)R 181.69 9.72E-05 7322600 13033 16234 14327 17846 18615 15175 15390 14760 14205 16365 TRUE FALSE 14030.8165 15427.84317 14804.65503 16387.92471 17884.08157 15752.49526 13369.27451 16689.18268 15440.52522 15831.01139 0.886286805 0.974533009 0.935167985 1.035178632 1.129686609 0.995040359 0.844499077 1.054208241 0.975334099 1 13.95046581 -4.597230299 1.258106378 1.000696783 0.802639523 0.185564549 0.070310012 3.979906854 4.077938018 0.022327596 1.141244537 2.53E-05 4.597230299 -0.198057259 TEVSETARPSSPDT(ph)R ddPTM_A459_MK2206_30min_R2 1 TEVSETARPSSPDTR 15 1 O75132 O75132 ZBED4 Zinc finger BED domain-containing protein 4 1 TEVSETARPS(0.014)S(0.107)PDT(0.879)R 160.63 0.0013197 7960900 4511.2 7619.8 5633.5 6511.7 6931.9 6482.2 8122.7 7012.3 5777.2 5702.8 TRUE FALSE 4856.580941 7241.411812 5821.318078 5979.67328 6659.718776 6728.884663 7056.179733 7928.831687 6279.690413 5516.718103 0.88033879 1.312630386 1.055213982 1.083918585 1.207188523 1.219726029 1.279053887 1.437237056 1.138301848 1 12.42959455 -6.406419547 2.973577395 1.245127545 1.097092832 0.146424523 0.143472755 0.461126732 7.817799719 0.04599134 0.052490779 3.92E-07 6.406419547 -0.148034713 TFCGT(ph)PDYIAPEIIAYQPYGK ddPTM_A459_MK2206_30min_R1 1 TFCGTPDYIAPEIIAYQPYGK 21 0 P17252;P05129-2;P05771;P05129;P05771-2 P17252;P05771-2 PRKCA;PRKCG;PRKCB Protein kinase C alpha type;Protein kinase C gamma type;Protein kinase C beta type 1 T(0.386)FCGT(0.614)PDYIAPEIIAYQPYGK 138.66 3.47E-05 14591000 5755.9 4770.9 5552.2 6552.4 6584.1 3728.6 5523.1 5462.9 4977.6 3574.9 TRUE FALSE 5266.33048 4460.313543 5175.332133 7057.066983 6321.841355 3939.71011 5154.664076 5415.138441 5495.039333 4017.785601 1.310754481 1.110142249 1.2881056 1.756456836 1.573464088 0.980567532 1.282961459 1.347791789 1.367678587 1 11.97218487 -6.746599394 24.99904405 1.222984382 1.403970741 0.209364266 0.202490083 508.5611177 856707.1222 0.073756591 0.073463322 1.79E-07 6.746599394 0.18098636 TFCGT(ph)PDYIAPEIIAYQPYGK ddPTM_A459_MK2206_30min_R2 1 TFCGTPDYIAPEIIAYQPYGK 21 0 P17252;P05129-2;P05771;P05129;P05771-2 P17252;P05771-2 PRKCA;PRKCG;PRKCB Protein kinase C alpha type;Protein kinase C gamma type;Protein kinase C beta type 1 T(0.4)FCGT(0.599)PDYIAPEIIAYQPYGK 117.62 0.0001027 3403000 38819 33437 34825 24127 41313 34838 29593 24519 34108 31325 TRUE FALSE 41791.01249 31776.5672 35986.04812 22155.74692 39690.84404 36163.7845 25707.40355 27723.71749 37074.65219 30302.86782 1.379110807 1.048632341 1.187545956 0.731143569 1.309804877 1.193411288 0.848348866 0.914887583 1.223470083 1 14.88716671 -4.150536685 1.665084642 1.043143281 2.788856823 0.238487123 0.173910129 10.91584542 6.458273103 0.047644201 51.6057569 7.07E-05 4.150536685 1.745713542 TFCPPPLPKPSSTTPTPLVS(ph)ETGGNSPSDKVDNELK ddPTM_A459_MK2206_30min_R1 1 TFCPPPLPKPSSTTPTPLVSETGGNSPSDKVDNELK 36 2 A0A3B3IRW6;Q2KHR3-2;Q2KHR3;H0YCQ7 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 TFCPPPLPKPSSTT(0.001)PT(0.013)PLVS(0.323)ET(0.323)GGNS(0.323)PS(0.017)DKVDNELK 56.728 0.0001858 20395000 2461.8 3271.6 3328.2 3621.6 2668.4 1546.2 2293.8 2740.7 2803.6 2526.1 TRUE FALSE 2252.410983 3058.618245 3102.291057 3900.53626 2562.111978 1633.744508 2140.784787 2716.738349 3095.044253 2839.052339 0.793367192 1.077337745 1.092720629 1.373886704 0.902453238 0.57545417 0.754049074 0.956917318 1.090168085 1 11.47119373 -6.499885328 24.55638008 0.851035531 1.091145969 0.221058134 0.185673066 881.4074283 941321.4369 0.061200738 0.068890378 3.16E-07 6.499885328 0.240110438 TFDHYCEYR ddPTM_A459_MK2206_30min_R1 2 TFDHYCEYR 9 0 Q14204;A0A2R8Y6H2;A0A2R8YFZ7;A0A2R8YGC7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ; 134.23 0.0041213 24627000 9288.1 8577.3 8379.1 7899 9130 8309.4 9612.7 8279.3 8209.6 7048.1 FALSE TRUE 8498.098321 8018.916211 7810.350038 8507.382349 8766.332767 8779.871047 8971.454322 8206.914953 9063.017298 7921.271838 1.072819933 1.012326855 0.985996971 1.07399197 1.106682481 1.108391585 1.132577508 1.036060259 1.144136634 1 12.95151637 -5.932778147 6.57448096 1.092817977 1.022951643 0.284977863 0.045234876 0.235633627 18.10979722 0.01215228 0.018120036 1.17E-06 5.932778147 -0.069866334 TFDHYCEYR ddPTM_A459_MK2206_30min_R2 3 TFDHYCEYR 9 0 Q14204;A0A2R8Y6H2;A0A2R8YFZ7;A0A2R8YGC7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ;; 166.07 0.0013118 22546800 162875 186095 170267 188818 214923 202808 187456 142989 182853 176874 FALSE TRUE 175344.8352 176853.7929 175943.6168 173390.9654 206484.0431 210526.0006 162842.802 161678.1533 198757.2234 171102.6159 1.024793422 1.033612444 1.028292969 1.013374135 1.206784841 1.230407843 0.951725964 0.944919237 1.161625861 1 17.38450229 -3.988119762 15.2740008 1.060992433 1.061192814 0 0.09726927 0 0 0.023489773 0 0.000102773 3.988119762 0.000200382 TFEHVTSEIGAEEAEEVGVEHLLR ddPTM_A459_MK2206_30min_R1 1 TFEHVTSEIGAEEAEEVGVEHLLR 24 0 H3BNT7;H3BTM8;P51665 H3BNT7 PSMD7 26S proteasome non-ATPase regulatory subunit 7 0 142.93 1.16E-08 1916500 921.92 708.01 1029.3 790.23 1032.9 963.58 1004.4 1182.2 869.06 665.03 FALSE TRUE 843.5058628 661.9184203 959.4339838 851.0936515 991.7574058 1018.137067 937.3983086 1171.86415 959.401897 747.4189371 1.128558324 0.885605632 1.283662931 1.138710313 1.326909657 1.362204001 1.25418057 1.567881267 1.283620001 1 9.545773307 -5.648301227 1.218973293 1.326960039 1.006752773 0.272958937 0.156536483 0.584599291 1.639943301 0.05143636 0.160202047 2.25E-06 5.648301227 -0.320207266 TFEMSDFIVDTR ddPTM_A459_MK2206_30min_R2 2 TFEMSDFIVDTR 12 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 0 ; 177.57 0.0014359 3475300 20091.4 21949.3 19222.3 23452 23664 21499 25627 17079.8 22607 18934.1 FALSE TRUE 21629.61303 20859.32968 19863.16189 21535.89658 22734.83246 22317.15951 22262.14412 19312.1885 24573.316 18316.28187 1.180895402 1.138840832 1.084453823 1.175778836 1.241236219 1.21843285 1.215429216 1.054372751 1.341610496 1 14.16083905 -4.431509559 18.64954961 1.168232493 1.8215646 0.000699507 0.094521414 1038.917205 351667.0352 0.021532026 18817.47281 3.70E-05 4.431509559 0.653332107 TFGHNT(ph)MDAVPR ddPTM_A459_MK2206_30min_R2 1 TFGHNTMDAVPR 12 0 G3XAL9;P55011-3;P55011 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 T(0.017)FGHNT(0.983)MDAVPR 86.548 0.040317 5994600 16100 11269 9116.3 14023 10428 15534 18751 11315 13242 19518 TRUE FALSE 17332.62838 10709.39785 9420.232892 12877.27604 10018.54432 16125.15726 16288.97118 12793.90935 14393.76522 18881.12926 0.91798685 0.56720113 0.498923172 0.682018319 0.5306115 0.854035637 0.862711703 0.677602975 0.762336035 1 14.20465743 -6.77292321 24.98026811 0.813148382 0.629909191 0.337644704 0.132909778 273.7701232 595516.4172 0.04646814 0.04132915 1.69E-07 6.77292321 -0.183239192 TFIAIKPDGVQR ddPTM_A459_MK2206_30min_R2 2 TFIAIKPDGVQR 12 1 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;E5RHP0;F6XY72;C9K028;P15531;P15531-2 Q32Q12;P15531 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ; 132.03 0.0054718 49555000 147415 161239 158787 158646 156562 157943 197414 148438 146333 165467 FALSE TRUE 158701.2057 153232.1057 164080.8793 145684.1143 150414.5892 163953.6315 171493.3047 167839.3563 159060.7798 160067.8253 0.991462247 0.957294855 1.02507096 0.910139899 0.939692839 1.024275998 1.071378988 1.048551487 0.993708633 1 17.28832382 -6.851598193 6.435864278 1.03432238 0.964807986 0.438088915 0.03529563 0.197239061 11.62007798 0.012812236 0.011322689 1.41E-07 6.851598193 -0.069514394 TFLEGDWT(ph)SPSK ddPTM_A459_MK2206_30min_R1 2 TFLEGDWTSPSK 12 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 TFLEGDWT(0.929)S(0.07)PSK;TFLEGDWT(0.855)S(0.144)PSK 108.98 0.018312 97132700 18920.1 19493.3 20575.7 19229.5 16490.4 14576.3 16751.4 17136.6 17993.6 16406.4 TRUE FALSE 17310.84614 18224.28263 19179.07881 20710.55942 15833.55245 15401.59751 15633.94467 16986.77651 19864.09911 18438.94869 0.938819584 0.988358009 1.040139497 1.123196326 0.858701475 0.835275252 0.847876141 0.921244307 1.077290221 1 14.17046878 -4.435139588 12.67774468 0.959702603 0.668773337 0.003592045 0.094413847 4217658.245 15630458.24 0.025990143 32399105.72 3.67E-05 4.435139588 -0.290929265 TFLEGDWT(ph)SPSK ddPTM_A459_MK2206_30min_R2 1 TFLEGDWTSPSK 12 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 TFLEGDWT(0.934)S(0.066)PSK 210.93 1.28E-05 22191000 169880 189460 181040 177130 192260 133300 229240 164690 160110 209650 TRUE FALSE 182886.1434 180051.6919 187075.7832 162657.9124 184710.9064 138372.8249 199140.5126 186215.5485 174036.0784 202809.1377 0.90176481 0.887788854 0.922422852 0.802024575 0.910762249 0.682281018 0.981910948 0.918181255 0.858127402 1 17.62976313 -10.76968994 3.515529594 1.000278342 0.873563636 0.191383593 0.077745514 64445864.75 98320081.42 196740.9363 0.019027476 1.70E-11 10.76968994 -0.126714706 TFLEGDWTS(ph)PSK ddPTM_A459_MK2206_30min_R1 2 TFLEGDWTSPSK 12 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 TFLEGDWT(0.193)S(0.793)PS(0.015)K;TFLEGDWT(0.201)S(0.794)PS(0.006)K 166.7 0.00045948 100250800 8061.2 9176.8 8781.16 7286.37 7032.01 6084.1 7607.6 7255.64 7607.3 6204.04 TRUE FALSE 7375.552609 8579.388652 8185.119325 7847.56748 6751.910151 6428.576484 7100.110885 7192.204704 8398.106058 6972.643313 1.057784298 1.230435613 1.17389044 1.125479553 0.968342972 0.921971223 1.018281097 1.031488975 1.204436493 1 12.76748997 -6.101104572 5.006270151 1.020768357 1.160082677 0.368683614 0.079070995 0.241266066 9.411613185 0.024552424 0.032328016 7.92E-07 6.101104572 0.13931432 TFLEGDWTS(ph)PSK ddPTM_A459_MK2206_30min_R2 3 TFLEGDWTSPSK 12 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 TFLEGDWT(0.106)S(0.894)PSK;TFLEGDWT(0.079)S(0.914)PS(0.007)K;TFLEGDWT(0.024)S(0.972)PS(0.004)K 179.93 0.00010359 51068000 288601 308261 303910 283675 321770 229154 341663 267816 237515 319251 TRUE FALSE 310696.5145 292953.207 314042.2077 260497.8451 309135.693 237874.616 296802.2377 302820.4707 258173.6254 308833.866 1.006031231 0.948578635 1.016864542 0.843488599 1.000977312 0.770234881 0.961041746 0.980528705 0.835962806 1 18.23647144 -5.741794614 24.99902301 0.912061848 0.986300189 0.182167687 0.074886908 424.9998799 540831.0194 0.019313473 0.033392087 1.81E-06 5.741794614 0.074238341 TFNS(ph)ELY(ph)S(ph)LNDY(ph)KPPISKAK ddPTM_A459_MK2206_30min_R2 1 TFNSELYSLNDYKPPISKAK 20 2 A0A0A0MT33;Q9UPN6 A0A0A0MT33 SCAF8 Protein SCAF8 4 T(0.108)FNS(0.894)ELY(0.909)S(0.915)LNDY(0.909)KPPIS(0.264)KAK 40.179 0.043466 4425000 6111.8 7878.9 7595 5478.5 6515 5554.7 7646.2 2191.2 6475.5 7598.6 TRUE FALSE 6579.724107 7487.645283 7848.213509 5030.889025 6259.188365 5766.088001 6642.244755 2477.597364 7038.727285 7350.658304 0.895120387 1.018636015 1.067688523 0.684413398 0.851513988 0.784431511 0.903625836 0.337057888 0.957564206 1 12.84365774 -5.759578588 24.9986848 0.768018733 0.996297097 0.209246905 0.179978495 67.70266615 909517.1939 0.047982583 0.077976464 1.74E-06 5.759578588 0.228278364 TFNT(ph)STGGLLLPSDTKR ddPTM_A459_MK2206_30min_R1 1 TFNTSTGGLLLPSDTKR 17 1 P12956;B1AHC9;P12956-2 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 T(0.183)FNT(0.424)S(0.288)T(0.105)GGLLLPSDTKR 68.401 0.045745 10415000 4331.4 3429.6 3442.6 3191.5 4916.7 4982.2 5047.2 4231.4 2641 2491.6 TRUE FALSE 3962.991685 3206.332417 3208.925904 3437.309883 4720.857428 5264.287858 4710.510497 4194.405316 2915.541401 2800.278219 1.415213552 1.145004948 1.145931102 1.227488705 1.685852997 1.879916011 1.682158032 1.497853066 1.041161332 1 11.45135446 -6.23557606 21.78708957 1.521037487 1.22084618 0.128707937 0.270814229 249.740624 210377.8915 0.082313253 0.106187216 5.81E-07 6.23557606 -0.300191307 TFQARPLS(ph)ADLTK ddPTM_A459_MK2206_30min_R1 2 TFQARPLSADLTK 13 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 T(0.001)FQARPLS(0.991)ADLT(0.008)K;TFQARPLS(1)ADLTK 157.37 0.0017324 27152000 6344.7 6599.1 7349.3 6095.9 6238.3 4486.5 5030.7 5629.4 4327.2 4368.5 TRUE FALSE 5805.049948 6169.497391 6850.449992 6565.407274 5989.815301 4740.521753 4695.111182 5580.182749 4777.027925 4909.70276 1.182362809 1.256592851 1.395288132 1.33723111 1.219995506 0.965541497 0.956292348 1.136562236 0.972977013 1 12.26141997 -6.637337257 4.35563663 1.012305629 1.295689533 0.792370939 0.070222509 0.103422964 3.444628925 0.02528079 0.025166491 2.30E-07 6.637337257 0.283383904 TFQEDSSPVVHQS(ph)LQEVSEPLTATK ddPTM_A459_MK2206_30min_R1 2 TFQEDSSPVVHQSLQEVSEPLTATK 25 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 TFQEDS(0.001)S(0.002)PVVHQS(0.997)LQEVSEPLTATK;TFQEDS(0.006)S(0.004)PVVHQS(0.989)LQEVS(0.001)EPLTATK 101.59 1.80E-06 17484400 2607.6 2843.6 3055.4 3207.5 3423.3 3580.3 3094.9 3021.2 2255 1968.35 TRUE FALSE 2385.809927 2658.481123 2848.007961 3454.542206 3286.942712 3783.013492 2888.444868 2994.785967 2489.41532 2212.204058 1.078476426 1.201734132 1.287407439 1.561583884 1.485822567 1.710065343 1.305686452 1.353756655 1.125309987 1 11.11126875 -8.365984574 2.108313172 1.000401452 1.389006933 0.357053731 0.17051662 0.363352978 3.197803932 0.178803483 0.050622928 4.31E-09 8.365984574 0.388605481 TFQQIQEEEDDDYPGS(ph)YSPQDPSAGPLLTEELIK ddPTM_A459_MK2206_30min_R1 2 TFQQIQEEEDDDYPGSYSPQDPSAGPLLTEELIK 34 0 Q9NQG5;A2A2M0 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 TFQQIQEEEDDDY(0.002)PGS(0.312)Y(0.283)S(0.312)PQDPS(0.061)AGPLLT(0.031)EELIK;TFQQIQEEEDDDY(0.001)PGS(0.347)Y(0.3)S(0.347)PQDPS(0.005)AGPLLTEELIK 103.1 4.85E-12 8756700 3167.8 3209.7 3588.5 2724.6 3210.2 2836.8 2984.5 3005.6 2954.9 2444.2 TRUE FALSE 2898.361975 3000.747947 3344.922618 2934.449164 3082.330936 2997.417164 2785.409451 2979.322356 3262.072429 2747.005949 1.055098543 1.092370385 1.217661221 1.06823546 1.122069262 1.091157872 1.013980131 1.08457077 1.187501043 1 11.42364432 -6.991573144 14.89196569 1.074848327 1.112892118 0.080891155 0.062376767 4.337273824 7651.371355 0.022346292 0.019525378 1.02E-07 6.991573144 0.038043791 TFS(ph)ATVR ddPTM_A459_MK2206_30min_R1 1 TFSATVR 7 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 T(0.108)FS(0.863)AT(0.029)VR 88.948 0.031607 371190000 4861.1 5734.7 5329 4728 5638.1 5324.9 6165.6 5756 5623.3 4847.3 TRUE FALSE 4447.637918 5361.369988 4967.282327 5092.151379 5413.522538 5626.391236 5754.304074 5705.675899 6207.862158 5447.820119 0.816406897 0.984131243 0.911792647 0.934713568 0.993704348 1.032778453 1.05625809 1.047331919 1.139513057 1 12.41146335 -6.407677044 0.842500969 1.072189295 0.893858722 0.666591747 0.048752884 0.372039199 0.578911505 0.026103609 0.036591123 3.91E-07 6.407677044 -0.178330573 TFS(ph)ATVR ddPTM_A459_MK2206_30min_R2 3 TFSATVR 7 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 T(0.209)FS(0.429)AT(0.362)VR;T(0.22)FS(0.77)AT(0.01)VR;T(0.397)FS(0.581)AT(0.022)VR 89.355 0.031073 4997740000 204531 247183 226781 210947 249816 249017 262719 232548 218109 267323 TRUE FALSE 220190.0506 234908.2517 234341.7654 193711.9553 240006.9686 258493.5164 228223.6797 262942.8221 237079.7266 258600.2724 0.85146875 0.90838362 0.906193034 0.749078698 0.928100216 0.999587178 0.882534568 1.016792518 0.916780653 1 17.98036427 -6.508966006 24.64406031 0.959672189 0.858570487 0.461226026 0.055731776 520.0335882 921153.0072 0.017184586 0.018711588 3.10E-07 6.508966006 -0.101101702 TFS(ph)DGLATR ddPTM_A459_MK2206_30min_R1 1 TFSDGLATR 9 0 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 T(0.081)FS(0.919)DGLATR 89.561 0.029706 2474000 1356.6 850.93 1008 987.28 1103.2 874.75 1111.2 1441.5 1142.7 1194.7 TRUE FALSE 1241.214046 795.5343023 939.5797684 1063.320477 1059.257208 924.2775891 1037.073875 1428.897117 1261.487754 1342.708456 0.924410687 0.592484764 0.699764543 0.791922083 0.788895909 0.688368041 0.772374577 1.064190154 0.939509801 1 10.39093037 -7.701121354 6.450529894 1.000832624 0.742176042 0.641354474 0.085619662 0.117536801 9.489910608 0.040056008 0.022610932 1.99E-08 7.701121354 -0.258656582 TFS(ph)DGLATR ddPTM_A459_MK2206_30min_R2 2 TFSDGLATR 9 0 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 T(0.014)FS(0.985)DGLAT(0.001)R;T(0.019)FS(0.981)DGLATR 119.03 0.007027 20367600 62283 64879 80641 68640 47911 47830 57232 40626 44163 77963 TRUE FALSE 67051.43437 61657.2032 83329.53069 63031.89243 46029.77341 49650.20417 49717.36965 45935.95769 48004.21791 75419.07369 0.889051417 0.817527983 1.10488669 0.835755325 0.610320058 0.658324237 0.659214801 0.609076132 0.636499702 1 16.20264181 -6.064220277 5.198577426 0.674350622 0.932305306 0.419175767 0.127141462 0.180932043 9.701825946 0.035891804 0.047688686 8.63E-07 6.064220277 0.257954685 TFS(ph)FLMNR ddPTM_A459_MK2206_30min_R1 1 TFSFLMNR 8 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 T(0.223)FS(0.777)FLMNR 122.94 0.0061569 7314800 2211.5 1877.7 2513.4 2480.7 2352.2 1904.8 2622.3 2286.9 2534.3 2020.3 TRUE FALSE 2023.400312 1755.461389 2342.797411 2671.763944 2258.506893 2012.64813 2447.371152 2266.905874 2797.749554 2270.590016 0.891134153 0.773130057 1.031801159 1.176682679 0.994678421 0.88639874 1.077856916 0.998377452 1.232168526 1 11.14885152 -5.295835551 9.39999317 1.047558233 0.83221611 0.45063788 0.09608709 0.371705968 99.60826372 0.025388136 0.053533987 5.06E-06 5.295835551 -0.215342124 TFS(ph)LDAVPPDHSPR ddPTM_A459_MK2206_30min_R1 2 TFSLDAVPPDHSPR 14 0 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 T(0.018)FS(0.982)LDAVPPDHSPR;T(0.042)FS(0.958)LDAVPPDHSPR 103.04 0.0047395 31279000 4172.8 3926.8 4695.6 3537 5438.4 5421.9 6198.5 5056.2 5592.3 5331 TRUE FALSE 3817.881448 3671.164606 4376.875755 3809.420353 5221.777012 5728.883292 5785.009375 5011.994176 6173.639597 5991.444527 0.637222198 0.612734473 0.730520951 0.635810001 0.871538907 0.956177307 0.965545012 0.836525174 1.030409206 1 12.54868816 -6.377624467 3.143476554 0.946809192 0.654708867 0.866831515 0.056184235 0.090171069 1.691587096 0.018024362 0.020819812 4.19E-07 6.377624467 -0.292100325 TFS(ph)LDAVPPDHSPR ddPTM_A459_MK2206_30min_R2 2 TFSLDAVPPDHSPR 14 0 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 T(0.447)FS(0.553)LDAVPPDHSPR;T(0.002)FS(0.998)LDAVPPDHSPR 108.66 0.0048152 24384900 25760 32749 27906 32103 32212 31956 35908 30101 38063 35709 TRUE FALSE 27732.20541 31122.73228 28836.37211 29480.08221 30947.19503 33172.10797 31193.23647 34035.30405 41373.65094 34543.81825 0.802812393 0.900963873 0.834776628 0.853411224 0.895882291 0.960290716 0.90300488 0.985279155 1.197715048 1 15.07613994 -7.933767927 2.873150533 1.09991766 0.879402857 0.67573443 0.06087292 0.149415769 2.415905049 0.042072246 0.016333578 1.16E-08 7.933767927 -0.220514803 TFS(ph)LTEVR ddPTM_A459_MK2206_30min_R1 2 TFSLTEVR 8 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 T(0.003)FS(0.984)LT(0.012)EVR;T(0.024)FS(0.891)LT(0.085)EVR 133.99 0.0029199 63594000 6101.7 4974 5467.1 4575.8 5434.8 5616.5 8501.5 10349.2 10242.8 8003.1 TRUE FALSE 5582.718374 4650.191696 5096.008484 4928.228909 5218.320408 5934.501376 7934.380447 10258.71804 11307.57571 8994.584448 0.620675519 0.516999059 0.566564082 0.547910683 0.580162479 0.659786054 0.882128629 1.140543857 1.257153766 1 13.13484091 -7.439507599 1.821412553 1.159239134 0.564177363 0.933476784 0.066500583 0.077264697 0.500427061 0.037876687 0.020324607 3.63E-08 7.439507599 -0.595061771 TFS(ph)LTEVR ddPTM_A459_MK2206_30min_R2 4 TFSLTEVR 8 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 T(0.012)FS(0.864)LT(0.123)EVR;T(0.001)FS(0.986)LT(0.013)EVR;T(0.013)FS(0.984)LT(0.002)EVR;T(0.001)FS(0.997)LT(0.003)EVR 157.34 0.00054282 87998000 71335 86049 67996 80929 76094 85717 110973 91016 111227 128905 TRUE FALSE 76796.46245 81775.93179 70262.9527 74316.84182 73106.16722 88979.0205 96402.1118 102912.1037 120901.3234 124698.8404 0.615855466 0.655787428 0.563461155 0.595970593 0.586261805 0.713551307 0.773079457 0.82528517 0.969546493 1 16.92808852 -7.713761196 0.900658946 1.003470198 0.60051269 0.952169125 0.032906165 0.119439981 0.17723424 0.030826365 0.013385494 1.93E-08 7.713761196 -0.402957508 TFS(ph)PTYGLLR ddPTM_A459_MK2206_30min_R2 1 TFSPTYGLLR 10 0 O15061;A0A075B7B1;O15061-2;H0YL34 O15061 SYNM Synemin 1 T(0.016)FS(0.971)PT(0.012)YGLLR 80.24 0.048067 14178000 10891 15309 16651 17955 15509 15327 13811 13374 14255 14495 TRUE FALSE 11724.82333 14548.77732 17206.13603 16488.01906 14900.03873 15910.27973 11997.59911 15122.02772 15494.87413 14022.02934 0.836171645 1.037565745 1.227078878 1.175865395 1.062616428 1.134663132 0.855625018 1.078447873 1.10503792 1 13.77540754 TFS(ph)SEEEEANYWK ddPTM_A459_MK2206_30min_R2 1 TFSSEEEEANYWK 13 0 Q9NXR1;Q9NXR1-1;I3L464;I3L3G9;I3L2S8 Q9NXR1 NDE1 Nuclear distribution protein nudE homolog 1 1 T(0.04)FS(0.854)S(0.106)EEEEANYWK 107.99 0.0081764 0 5229.2 5735.1 5737.3 8694.4 5688.2 5360.2 7683.6 4759 5742.8 5861.5 TRUE FALSE 5629.551573 5450.303274 5928.578718 7984.039708 5464.852687 5564.186167 6674.73409 5381.01764 6242.298363 5670.239735 0.992824261 0.961212141 1.045560505 1.408060343 0.963778066 0.981296458 1.177152008 0.948992969 1.100887909 1 12.46919402 -7.784293156 24.98688546 1.018705439 1.074983106 0.040092037 0.132304948 1084.616844 1185834.178 0.07485507 0.035994017 1.64E-08 7.784293156 0.056277667 TFS(ph)YIK ddPTM_A459_MK2206_30min_R2 1 TFSYIK 6 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;H0YMW2;A0A087WY36 Q12802-4 AKAP13 A-kinase anchor protein 13 1 T(0.013)FS(0.987)YIK 98.997 0.033855 27034000 85331 94831 84329 80238 90641 55008 102170 52005 75526 73717 TRUE FALSE 91864.00697 90121.83044 87140.48677 73682.29873 87081.97891 57101.36799 88754.95627 58802.23206 82095.11496 71311.62033 1.288205296 1.263774824 1.221967561 1.033243928 1.221147108 0.8007302 1.244607202 0.824581349 1.151216514 1 16.12184956 -5.694176746 0.97101871 1.016867733 1.313007286 0.343367426 0.139169076 0.758776432 1.294189488 0.050942069 0.17459584 2.02E-06 5.694176746 0.296139553 TFSAT(ph)VR ddPTM_A459_MK2206_30min_R2 1 TFSATVR 7 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 T(0.019)FS(0.451)AT(0.529)VR 104.75 0.041729 580550000 62057 64408 70089 83910 59556 93264 81522 69114 64583 75025 TRUE FALSE 66808.13163 61209.59238 72425.73228 77054.28459 57217.5322 96813.22687 70818.06347 78147.4371 70200.3126 72576.94039 0.920514578 0.84337521 0.997916582 1.061691002 0.788370685 1.333939215 0.975765348 1.076752984 0.967253679 1 16.14722362 -5.394196679 4.612486283 1.032582421 0.883235261 0.168299803 0.128453987 0.367263353 11.99245067 0.033077415 0.071897713 4.03E-06 5.394196679 -0.14934716 TFSHELSDFGLESTAGEIPVVAIR ddPTM_A459_MK2206_30min_R1 1 TFSHELSDFGLESTAGEIPVVAIR 24 0 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 121.14 2.10E-07 5418100 1134.8 1435.7 858.76 1122.7 1343.6 1186.9 1517.4 1293.7 1052.8 915.15 FALSE TRUE 1038.279301 1342.235669 800.4697638 1209.170549 1290.081567 1254.101252 1416.177015 1282.389317 1162.242327 1028.525691 1.009483098 1.305009375 0.7782691 1.175634755 1.254301743 1.219319326 1.376899991 1.246822834 1.130008067 1 10.00636212 -5.983139412 24.99255077 1.225228893 1.044766489 0.205337575 0.149712314 350.3259097 519286.2447 0.040760382 0.060442496 1.04E-06 5.983139412 -0.180462404 TFSLT(ph)EVR ddPTM_A459_MK2206_30min_R1 1 TFSLTEVR 8 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 T(0.001)FS(0.499)LT(0.5)EVR 102.07 0.038643 28912000 3201.8 3263.6 3383.6 2786.1 3672.8 3493.7 4758.2 5547.3 6038 5199.8 TRUE FALSE 2929.470097 3051.139047 3153.930659 3000.685905 3526.504599 3691.510275 4440.78916 5498.800541 6665.671707 5843.99048 0.501279067 0.522098566 0.53968785 0.513465228 0.603441195 0.631676298 0.759889869 0.940932495 1.140602766 1 12.51273811 -7.569562159 1.226339199 1.08058876 0.530617253 0.958733593 0.044923586 0.083565471 0.234348417 0.034248032 0.015255446 2.69E-08 7.569562159 -0.549971507 TFSVWYVPEVTGTHK ddPTM_A459_MK2206_30min_R1 2 TFSVWYVPEVTGTHK 15 0 P21333-2;P21333;Q60FE5;A0A087WWY3;F8WE98 P21333-2 FLNA Filamin-A 0 ; 99.566 0.011454 12388200 7943.3 7123.8 7748.3 7252.2 8160.3 6742.1 7334.3 7079.8 6082.1 6166.2 FALSE TRUE 7267.680623 6660.039325 7222.366984 7810.765701 7835.257971 7123.831876 6845.042229 7017.902055 6714.35606 6930.115408 1.048709898 0.961028631 1.042171242 1.127075848 1.130610027 1.027952849 0.987724132 1.012667415 0.968866413 1 12.75866366 -6.999781058 24.99999689 0.995437013 1.060881278 0.340358897 0.045602381 10.83637673 1237214.58 0.018505014 0.01616667 1.00E-07 6.999781058 0.065444265 TFTAWCNSHLR ddPTM_A459_MK2206_30min_R1 1 TFTAWCNSHLR 11 0 O43707;F5GXS2;O43707-3;K7EP19;P12814-4;P12814-3;P12814;P12814-2;A0A494C1A0;P35609;P35609-2;G3V2N5;Q08043;A0A494C033;A0A494C166;A0A494C0Q3 O43707;P12814-4 ACTN4;ACTN1;ACTN2;ACTN3 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3 0 101.72 0.021067 12269000 4644 4885.8 4671.4 3853.6 4841.5 3905.6 4659.5 4256 4823.6 4394.6 FALSE TRUE 4249.003413 4567.733532 4354.318383 4150.40494 4648.652803 4126.731697 4348.673257 4218.790241 5325.030481 4939.036226 0.860289988 0.924822845 0.881612967 0.840326888 0.94120646 0.835533798 0.880470006 0.854172767 1.078151736 1 12.27001383 -8.258267474 24.99971767 1.039075877 0.878642668 0.757843564 0.03657174 114.9722079 906183.9344 0.025572939 0.008771058 5.52E-09 8.258267474 -0.160433209 TFVLTPELS(ph)PGKLQVLPFEK ddPTM_A459_MK2206_30min_R1 1 TFVLTPELSPGKLQVLPFEK 20 1 Q96DY7 Q96DY7 MTBP Mdm2-binding protein 1 TFVLT(0.006)PELS(0.994)PGKLQVLPFEK 66.3 0.0095862 6763500 2610.4 2771.5 2584 2418.1 2213.6 1824.1 2413.5 2488.9 1959.1 1766.6 TRUE FALSE 2388.371772 2591.074846 2408.605279 2604.342481 2125.427625 1927.378966 2252.499819 2467.13981 2162.755456 1985.459745 1.20293135 1.305025122 1.213122193 1.311707521 1.070496458 0.970746937 1.134497853 1.242603793 1.089297056 1 10.9552574 -6.267984969 24.71700511 1.093538738 1.25832185 0.551530865 0.076430786 382.3660616 1443861.587 0.024933279 0.028930247 5.40E-07 6.267984969 0.164783112 TFVNITPAEVGVLVGK ddPTM_A459_MK2206_30min_R1 2 TFVNITPAEVGVLVGK 16 0 P07737;I3L3D5 P07737 PFN1 Profilin-1 0 ; 193.45 1.61E-05 189370000 7966.26 7498.93 7500.58 8116.25 8445.98 7734.84 7158.02 7360.74 6046.91 7410.37 FALSE TRUE 7288.687755 7010.748294 6991.461527 8741.364981 8109.558732 8172.779956 6680.521546 7296.385826 6675.507934 8328.422581 0.875158253 0.841785851 0.839470075 1.049582306 0.973720852 0.981311872 0.802135276 0.876082566 0.801533288 1 13.02382756 -10.50833713 17.87032346 1 0.896659701 0.141129891 0.078511884 0 0 0.08236436 0.019976292 3.10E-11 10.50833713 -0.103340299 TFWS(ph)PELK ddPTM_A459_MK2206_30min_R1 1 TFWSPELK 8 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EPP6;O15083 X6RM00 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 1 T(0.009)FWS(0.991)PELK 152.04 0.0010573 39222000 3497.7 4657.8 4233.9 3147.6 3335.9 3315.7 3949.3 3651.3 4261.5 4985.8 TRUE FALSE 3200.202248 4354.576373 3946.514664 3390.028697 3203.024039 3503.432069 3685.849403 3619.377069 4704.498175 5603.478545 0.571109931 0.777120201 0.704297274 0.604986469 0.57161351 0.625224499 0.657778802 0.645916111 0.839567447 1 12.45210699 -8.476640692 2.424641589 0.9989759 0.645781394 0.79444967 0.058741035 0.124720655 1.634550323 0.059828844 0.016369438 3.34E-09 8.476640692 -0.353194506 TGADTTAAGPLFQQRPYPS(ph)PGAVLR ddPTM_A459_MK2206_30min_R2 2 TGADTTAAGPLFQQRPYPSPGAVLR 25 1 H7C053;O60828-5;O60828-4;O60828-2;O60828 H7C053 PQBP1 Polyglutamine-binding protein 1 1 TGADTT(0.001)AAGPLFQQRPY(0.008)PS(0.991)PGAVLR;TGADTTAAGPLFQQRPY(0.26)PS(0.74)PGAVLR 73.299 0.00028272 58411000 33878 40445 36018 40031 40551 35593 39136 29373 30742 37946 TRUE FALSE 36471.72573 38436.56011 37218.82214 36760.33925 38958.76399 36947.51656 33997.39619 33212.15195 33415.88359 36707.82513 0.993568145 1.047094454 1.013920656 1.001430597 1.061320409 1.006529709 0.926162094 0.904770354 0.910320442 1 15.16380002 -7.210535056 4.355878432 0.926907873 1.02370714 0.642731635 0.031059393 0.120961255 4.959930431 0.011937406 0.008881656 6.16E-08 7.210535056 0.096799266 TGDLGIPPNPEDRS(ph)PS(ph)PEPIYNSEGK ddPTM_A459_MK2206_30min_R1 7 TGDLGIPPNPEDRSPSPEPIYNSEGK 26 1 Q15637-6;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-6;Q15637-5 SF1 Splicing factor 1 2 T(0.026)GDLGIPPNPEDRS(0.988)PS(0.979)PEPIY(0.005)NS(0.002)EGK;T(0.032)GDLGIPPNPEDRS(0.993)PS(0.949)PEPIY(0.008)NS(0.019)EGK;T(0.003)GDLGIPPNPEDRS(0.997)PS(0.994)PEPIY(0.004)NS(0.002)EGK;T(0.015)GDLGIPPNPEDRS(0.99)PS(0.985)PEPIY(0.009)NS(0.002)EGK;T(0.004)GDLGIPPNPEDRS(0.987)PS(0.974)PEPIY(0.015)NS(0.02)EGK;T(0.012)GDLGIPPNPEDRS(0.992)PS(0.954)PEPIY(0.015)NS(0.027)EGK;T(0.008)GDLGIPPNPEDRS(0.987)PS(0.98)PEPIY(0.011)NS(0.013)EGK 73.107 0.00074165 81862500 34820.7 37080.7 36993.7 31132.99 30410.37 28860.53 32974.94 31415.08 34161.7 33369.22 TRUE FALSE 31859.01661 34666.73969 34482.67071 33530.85828 29199.06057 30494.58827 30775.24192 31140.42127 37712.93096 37503.2509 0.849500133 0.924366258 0.919458177 0.894078713 0.77857412 0.813118531 0.820601979 0.830339251 1.005590984 1 15.19472804 -8.266645589 24.43716537 1.002795533 0.854676974 0.640781541 0.044632172 241.9528165 1135663.502 0.044753326 0.012940634 5.41E-09 8.266645589 -0.148118559 TGDLGIPPNPEDRS(ph)PS(ph)PEPIYNSEGK ddPTM_A459_MK2206_30min_R2 6 TGDLGIPPNPEDRSPSPEPIYNSEGK 26 1 Q15637-6;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-6;Q15637-5 SF1 Splicing factor 1 2 T(0.004)GDLGIPPNPEDRS(0.991)PS(0.91)PEPIY(0.052)NS(0.043)EGK;T(0.043)GDLGIPPNPEDRS(0.969)PS(0.957)PEPIY(0.015)NS(0.015)EGK;T(0.017)GDLGIPPNPEDRS(0.963)PS(0.962)PEPIY(0.033)NS(0.025)EGK;T(0.006)GDLGIPPNPEDRS(0.99)PS(0.928)PEPIY(0.031)NS(0.046)EGK;T(0.006)GDLGIPPNPEDRS(0.987)PS(0.96)PEPIY(0.021)NS(0.026)EGK;T(0.003)GDLGIPPNPEDRS(0.991)PS(0.98)PEPIY(0.025)NS(0.001)EGK 73.164 0.0040191 28158500 150000 156425 152439 155126 158188 137608 183718 146717.1 133077.6 168071 TRUE FALSE 161484.1153 148657.162 157521.2402 142451.7096 151976.7443 142844.7689 159595.6059 165893.5287 144652.4491 162586.857 0.993217522 0.914324593 0.968843626 0.876157595 0.934741879 0.878575129 0.981602135 1.020337878 0.889693372 1 17.31085111 -7.307244861 24.97220139 0.974603191 0.926893086 0.187227179 0.04613284 705.9433302 384863.138 0.018588736 0.012532605 4.93E-08 7.307244861 -0.047710105 TGDLGIPPNPEDRS(ph)PSPEPIYNSEGK ddPTM_A459_MK2206_30min_R1 1 TGDLGIPPNPEDRSPSPEPIYNSEGK 26 1 Q15637-6;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-6;Q15637-5 SF1 Splicing factor 1 1 T(0.004)GDLGIPPNPEDRS(0.939)PS(0.048)PEPIY(0.004)NS(0.005)EGK 47.018 0.028274 13510000 2346.7 2561.3 2612.6 1928.6 2167.9 1756.7 2167.1 2452.2 2051 2163.1 TRUE FALSE 2147.100842 2394.558904 2435.263991 2077.141106 2081.547952 1856.162836 2022.536713 2430.760674 2264.20879 2431.081159 0.883187644 0.98497695 1.001720565 0.854410433 0.856223144 0.763513316 0.831949483 0.999868172 0.931358783 1 11.24738234 -10.72922925 5.129965553 1.000008448 0.900420222 0.136415404 0.074871674 8.08E-06 1.25E-06 0.081009438 0.019646008 1.87E-11 10.72922925 -0.099588227 TGDLGIPPNPEDRSPS(ph)PEPIYNSEGK ddPTM_A459_MK2206_30min_R1 2 TGDLGIPPNPEDRSPSPEPIYNSEGK 26 1 Q15637-6;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-6;Q15637-5 SF1 Splicing factor 1 1 TGDLGIPPNPEDRS(0.102)PS(0.845)PEPIY(0.036)NS(0.017)EGK;T(0.001)GDLGIPPNPEDRS(0.153)PS(0.825)PEPIY(0.01)NS(0.011)EGK 85.423 4.93E-05 13890200 2139.89 2828.1 2736.4 2507 2259.9 2004.19 2127.2 2983.7 1503.59 1809.61 TRUE FALSE 1957.881118 2643.990176 2550.660792 2700.089574 2169.883398 2117.665506 1985.298369 2957.613825 1659.893561 2033.798149 0.962672289 1.300025854 1.254136648 1.327609417 1.066911876 1.041236815 0.976153101 1.454231742 0.816154525 1 10.98996079 -6.291694928 23.59701967 1.07678425 1.220535382 0.145245737 0.176970058 712.1548421 555423.9473 0.053225779 0.060363063 5.11E-07 6.291694928 0.143751131 TGEDEDEEDNDALLKENES(ph)PDVR ddPTM_A459_MK2206_30min_R2 2 TGEDEDEEDNDALLKENESPDVR 23 1 A0A087WWS1;Q96FV9 A0A087WWS1 THOC1 THO complex subunit 1 1 TGEDEDEEDNDALLKENES(1)PDVR;TGEDEDEEDNDALLKENES(1)PDVR 88.176 0.0001194 36330000 110237 57181 74191 52610 47039 32590 73976 50074 31265 82307 TRUE FALSE 118676.8295 54341.47469 76664.49091 48311.59471 45192.01251 33830.23529 64262.86234 56618.84373 33984.37319 79621.32933 1.49051555 0.682498963 0.96286374 0.606766995 0.567586762 0.424889104 0.807106122 0.711101462 0.426824991 1 16.28086734 -2.54935191 1.207871169 0.651669619 199.9999993 0.605342023 0.19118781 237.2219183 1.899610334 0.054538861 129353.9081 0.002822592 2.54935191 199.3483297 TGEPSPPHDILHEPPDVVS(ph)DDEKDHGK ddPTM_A459_MK2206_30min_R2 1 TGEPSPPHDILHEPPDVVSDDEKDHGK 27 1 J3QLT3;E7ENF8;A0A1W2PRI7;Q15311 J3QLT3 RALBP1 RalA-binding protein 1 1 TGEPSPPHDILHEPPDVVS(1)DDEKDHGK 61.16 0.0017632 10755000 47984 45269 41835 44407 39515 21605 52038 41670 30309 57665 TRUE FALSE 51657.69193 43021.00729 43229.75802 40778.80605 37963.44255 22427.19341 45205.34809 47116.41207 32945.22203 55783.39577 0.926040647 0.771215282 0.774957448 0.731020503 0.680550942 0.402040663 0.810372826 0.844631479 0.590591906 1 15.76754814 -10.47642708 14.62393094 0.999999951 0.723795713 0.26156792 0.138223697 0 0 0.138402576 0.033567555 3.34E-11 10.47642708 -0.276204238 TGGPAYGPSSDVS(ph)TASETESEKR ddPTM_A459_MK2206_30min_R2 1 TGGPAYGPSSDVSTASETESEKR 23 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 TGGPAY(0.01)GPS(0.055)S(0.05)DVS(0.306)T(0.278)AS(0.253)ET(0.033)ES(0.016)EKR 48.229 0.030222 20062000 31610 25612 28937 27455 28949 18848 36809 25862 20098 35220 TRUE FALSE 34030.0859 24340.14532 29901.74514 25211.83868 27812.3168 19565.27385 31975.93408 29242.2522 21846.08771 34070.77428 0.998805769 0.714399536 0.877636208 0.739984318 0.816310089 0.574253866 0.93851504 0.858279649 0.641197277 1 15.05624711 -10.69273592 14.84779736 0.999999414 0.794044822 0.194976363 0.124637238 0 0 0.114566713 0.027786509 2.03E-11 10.69273592 -0.205954592 TGGPAYGPSSDVS(ph)TASETESEKREEPNR ddPTM_A459_MK2206_30min_R1 1 TGGPAYGPSSDVSTASETESEKREEPNR 28 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 TGGPAY(0.001)GPS(0.057)S(0.057)DVS(0.236)T(0.21)AS(0.187)ET(0.21)ES(0.042)EKREEPNR 58.92 0.0060212 11668000 672.96 455.83 736.57 529.55 538.03 503.46 260.05 612.29 668.82 673.21 TRUE FALSE 615.7212181 426.1553841 686.5736806 570.3360328 516.5991258 531.9654701 242.702539 606.9368131 738.3462324 756.6123373 0.813786913 0.563241389 0.907431252 0.753802185 0.682779146 0.703088549 0.320775286 0.802176733 0.97585804 1 9.563410491 -8.126486697 4.232646116 0.983112753 0.679623838 0.401183141 0.149026861 0.240626584 6.884370928 0.113522873 0.039580181 7.47E-09 8.126486697 -0.303488915 TGGPAYGPSSDVSTAS(ph)ETESEKR ddPTM_A459_MK2206_30min_R1 4 TGGPAYGPSSDVSTASETESEKR 23 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 TGGPAYGPSSDVS(0.001)T(0.014)AS(0.919)ET(0.062)ES(0.004)EKR;TGGPAYGPSSDVST(0.004)AS(0.995)ET(0.001)ESEKR;TGGPAYGPS(0.001)S(0.002)DVS(0.056)T(0.152)AS(0.788)ET(0.001)ESEKR;TGGPAYGPSSDVST(0.001)AS(0.999)ETESEKR 177.1 7.50E-17 118730000 10718.6 11385.1 11736.5 8500.75 8703.8 8394.2 10849.1 9641.4 12544.5 13779.3 TRUE FALSE 9806.926784 10643.92792 10939.85908 9155.479238 8357.109215 8869.47235 10125.37633 9557.106256 13848.54567 15486.38371 0.633261255 0.687308807 0.706417927 0.591195427 0.539642396 0.572727146 0.653824451 0.61712963 0.894240122 1 13.91871267 -8.371619195 3.114854695 0.996728541 0.623888077 0.878408373 0.048574502 0.08602925 1.520893168 0.052630106 0.014230109 4.25E-09 8.371619195 -0.372840464 TGGPAYGPSSDVSTAS(ph)ETESEKR ddPTM_A459_MK2206_30min_R2 3 TGGPAYGPSSDVSTASETESEKR 23 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 TGGPAYGPSS(0.003)DVS(0.006)T(0.043)AS(0.937)ET(0.009)ES(0.001)EKR;TGGPAYGPSSDVST(0.001)AS(0.998)ETESEKR;TGGPAYGPSSDVS(0.002)T(0.011)AS(0.977)ET(0.009)ESEKR 146.91 6.75E-08 91645000 152386 121600 128717 125567 111217 80848 153734 102728 78537 160445 TRUE FALSE 164052.7893 115561.5208 133008.3605 115307.7744 106850.0618 83924.72729 133548.5411 116154.9023 85368.0063 155209.6928 1.056975156 0.744550928 0.856959112 0.742916066 0.688423898 0.540718339 0.86043944 0.748374024 0.550017236 1 17.24385913 -1.856631969 1.048707106 0.725563135 199.9540038 0.31322631 0.133540196 1170.866593 2.77128103 0.039750821 559184.1384 0.01391131 1.856631969 199.2284406 TGGS(ph)PSVR ddPTM_A459_MK2206_30min_R2 2 TGGSPSVR 8 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 T(0.314)GGS(0.666)PS(0.02)VR;T(0.259)GGS(0.736)PS(0.005)VR 81.525 0.043521 85814000 144536 144110 164868 159226 182774 191900 174295 292960 230880 229660 TRUE FALSE 155601.7873 136953.707 170364.6168 146216.7265 175597.3744 199202.889 151409.8571 331250.8779 250961.5251 222166.213 0.700384569 0.616447052 0.76683405 0.658141148 0.790387395 0.896638991 0.681516127 1.491004745 1.129611572 1 17.7612799 -7.746145136 24.99459199 1.232731128 0.733057483 0.719180991 0.136243862 108.0486677 176578.9631 0.06217159 0.035721997 1.79E-08 7.746145136 -0.499673646 TGGSGS(ph)PPLR ddPTM_A459_MK2206_30min_R2 1 TGGSGSPPLR 10 0 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 T(0.098)GGS(0.362)GS(0.539)PPLR 80.24 0.048067 21541000 77104 87225 80864 86909 81514 82574 93654 67815 81393 78732 TRUE FALSE 83007.14152 82893.53334 83559.9654 79808.25669 78313.35079 85716.41143 81357.1173 76678.65334 88472.41602 76162.98129 1.089862032 1.088370386 1.097120464 1.047861511 1.028233788 1.125434036 1.068197646 1.006770639 1.161619655 1 16.21680233 -10.73627121 4.037885374 0.999949673 1.076541145 0.23235979 0.042969073 1.90E-05 3.70E-06 0.040006504 0.009696542 1.84E-11 10.73627121 0.076591472 TGIPS(ph)GDELDSFETNTEPDFNISR ddPTM_A459_MK2206_30min_R1 1 TGIPSGDELDSFETNTEPDFNISR 24 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 T(0.107)GIPS(0.893)GDELDSFETNTEPDFNISR 79.784 0.00018012 4336700 1234.1 819.1 1065.2 956.08 1064.2 1001.8 1144.8 908.32 968.58 848.46 TRUE FALSE 1129.133314 765.7764411 992.8971918 1029.717447 1021.810661 1058.52105 1068.432481 900.378654 1069.267357 953.5736303 1.184107109 0.803059582 1.041238097 1.079851009 1.071559267 1.110056965 1.120450951 0.944215135 1.121326475 1 9.897200531 -5.505528119 24.59681822 1.065759663 0.97572473 0.065742849 0.100303108 1189.344268 1686049.635 0.024706285 0.049651782 3.12E-06 5.505528119 -0.090034933 TGLDAS(ph)PLAADTSYYQGVYSR ddPTM_A459_MK2206_30min_R1 2 TGLDASPLAADTSYYQGVYSR 21 0 Q9Y261;Q9Y261-2 Q9Y261 FOXA2 Hepatocyte nuclear factor 3-beta 1 T(0.002)GLDAS(0.997)PLAADTSYYQGVYSR;T(0.002)GLDAS(0.998)PLAADTSYYQGVYSR 229.37 7.27E-25 12896800 3774.58 3344.17 3520.63 2616.95 3139.49 3347.7 3540.08 2673.53 3554.07 4013.5 TRUE FALSE 3453.53215 3126.463925 3281.659445 2818.507942 3014.437465 3537.243881 3303.927722 2650.155609 3923.528295 4510.72268 0.765627239 0.693118187 0.727524097 0.624846204 0.668282597 0.784185624 0.73246084 0.587523507 0.869822548 1 12.13914288 -8.49876398 5.152190972 0.99961763 0.700034488 0.74975532 0.057220904 0.07372297 6.051420188 0.055397706 0.014401972 3.17E-09 8.49876398 -0.299583142 TGLDAS(ph)PLAADTSYYQGVYSR ddPTM_A459_MK2206_30min_R2 2 TGLDASPLAADTSYYQGVYSR 21 0 Q9Y261;Q9Y261-2 Q9Y261 FOXA2 Hepatocyte nuclear factor 3-beta 1 T(0.005)GLDAS(0.994)PLAADTSYYQGVYSR;TGLDAS(1)PLAADTSYYQGVYSR 156.29 1.86E-07 12941300 94708 81370 70819 98313 69998 64847 88639 78047 53664 87447 TRUE FALSE 101958.9173 77329.28412 73180.07011 90280.51341 67249.52681 67314.79803 77000.59283 88248.01088 58331.59772 84593.61155 1.205279163 0.914126761 0.865077974 1.067226139 0.794971696 0.795743281 0.910241228 1.043199472 0.689550861 1 16.3682611 -4.762142005 5.298998041 0.896290278 1.221927154 0.404236534 0.11218062 0.157982933 13.05067581 0.027027023 0.190065716 1.73E-05 4.762142005 0.325636876 TGLSLWDT(ph)SPSYIDK ddPTM_A459_MK2206_30min_R1 1 TGLSLWDTSPSYIDK 15 0 E7EPP6;O14757-2;O14757-3;O14757 E7EPP6 CHEK1 Serine/threonine-protein kinase Chk1 1 TGLSLWDT(0.573)S(0.363)PS(0.063)Y(0.001)IDK 138.31 0.00093108 6427000 4514.4 5006.6 5154.7 4581 4767.5 4134.8 4838.8 3940.7 4052.7 3818.5 TRUE FALSE 4130.426574 4680.66943 4804.813326 4933.829414 4577.60038 4368.908803 4516.012481 3906.246875 4473.992668 4291.564608 0.962452381 1.090667357 1.119594778 1.149657494 1.066650697 1.018022377 1.052299777 0.910215092 1.04250852 1 12.067288 -7.039478865 1.664585928 0.989281927 1.08488302 0.287746289 0.057686596 0.449533746 2.499274206 0.028769802 0.021031143 9.13E-08 7.039478865 0.095601093 TGLSLWDT(ph)SPSYIDK ddPTM_A459_MK2206_30min_R2 1 TGLSLWDTSPSYIDK 15 0 E7EPP6;O14757-2;O14757-3;O14757 E7EPP6 CHEK1 Serine/threonine-protein kinase Chk1 1 TGLSLWDT(0.556)S(0.431)PS(0.012)Y(0.001)IDK 108.71 0.010163 0 10584 11770 11734 12010 11091 9828.6 12270 9692.8 9327.2 12193 TRUE FALSE 11394.31918 11185.51892 12125.2057 11028.74458 10655.51161 10202.63426 10658.93426 10959.68224 10138.463 11795.14341 0.966017859 0.948315635 1.027982898 0.935024204 0.903381268 0.864986029 0.903671443 0.929169054 0.859545547 1 13.52590534 -5.983050133 9.187590586 0.905350483 0.978278672 0.369363861 0.040962288 0.219155187 104.257845 0.011079593 0.016223973 1.04E-06 5.983050133 0.072928189 TGLSLWDTSPS(ph)YIDK ddPTM_A459_MK2206_30min_R2 1 TGLSLWDTSPSYIDK 15 0 E7EPP6;O14757-2;O14757-3;O14757 E7EPP6 CHEK1 Serine/threonine-protein kinase Chk1 1 TGLSLWDT(0.247)S(0.247)PS(0.484)Y(0.022)IDK 111.81 0.0037414 0 7724.8 10464 6782 9740 8700.9 8573.5 10985 7462 6531.8 9365.1 TRUE FALSE 8316.216627 9944.372976 7008.108495 8944.210843 8359.258947 8899.77055 9542.656305 8437.309021 7099.924157 9059.517554 0.917953586 1.097671362 0.773563101 0.987272312 0.922704647 0.982366941 1.053329413 0.931319904 0.78369782 1 13.14521851 -8.008487789 24.9277372 0.88040222 0.96260042 0.07775504 0.095105635 811.1879329 2382361.571 0.053535599 0.023713285 9.81E-09 8.008487789 0.0821982 TGNESGSNLS(ph)DSGSVK ddPTM_A459_MK2206_30min_R1 2 TGNESGSNLSDSGSVK 16 0 Q9UDT6-2;Q9UDT6 Q9UDT6-2 CLIP2 CAP-Gly domain-containing linker protein 2 1 TGNES(0.001)GS(0.009)NLS(0.754)DS(0.2)GS(0.035)VK;TGNESGS(0.02)NLS(0.649)DS(0.091)GS(0.24)VK 220.1 1.34E-39 5791300 13714.5 11841.5 11534.4 10207.9 11643.7 10474.9 11142.9 10300 10311.4 8699.6 TRUE FALSE 12548.00976 11070.6162 10751.47706 10994.11423 11179.90677 11067.97979 10399.57747 10209.94819 11383.30693 9777.372127 1.283372423 1.132269086 1.099628502 1.124444696 1.143446995 1.131999441 1.063637278 1.044242569 1.164250146 1 13.25523105 -2.115751156 1.182526157 1.098062781 132.400834 0.584121898 0.047049049 806.1680885 2.137434219 0.013804573 286329.3073 0.007660354 2.115751156 131.3027712 TGNESGSNLSDS(ph)GSVK ddPTM_A459_MK2206_30min_R2 2 TGNESGSNLSDSGSVK 16 0 Q9UDT6-2;Q9UDT6 Q9UDT6-2 CLIP2 CAP-Gly domain-containing linker protein 2 1 TGNESGSNLS(0.154)DS(0.839)GS(0.007)VK;TGNESGSNLS(0.042)DS(0.958)GS(0.001)VK 220.78 7.68E-11 19459700 97044 108839 95385 122636 116944 97844 110646 88467 83146 97793 TRUE FALSE 104473.7633 103434.2135 98565.08829 112616.2465 112352.191 101567.522 96118.04729 100029.9407 90377.88879 94602.02242 1.104350209 1.093361546 1.041891978 1.190421131 1.187629906 1.0736295 1.01602529 1.057376345 0.955348379 1 16.52958341 -7.103643216 3.548438972 1.011960887 1.12173374 0.5706204 0.047226996 0.210153305 4.875607318 0.020452539 0.015685835 7.88E-08 7.103643216 0.109772852 TGPLSTSS(ph)PSRR ddPTM_A459_MK2206_30min_R1 2 TGPLSTSSPSRR 12 1 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 T(0.001)GPLS(0.066)T(0.066)S(0.144)S(0.722)PS(0.002)RR;T(0.001)GPLS(0.07)T(0.07)S(0.024)S(0.826)PS(0.009)RR 118.24 0.0082068 11556500 7334.1 7012.4 7626.7 6673.5 7009.4 6282.3 6710 6407.4 5166.1 5234.2 TRUE FALSE 6710.296282 6555.891485 7109.020853 7187.494126 6730.200755 6637.998397 6262.388143 6351.380777 5703.134582 5882.652212 1.140692334 1.114444854 1.208472063 1.22181184 1.144075922 1.128402319 1.064551824 1.079679802 0.969483555 1 12.52225103 -7.568757217 1.018967078 0.991079831 1.169585856 0.789808555 0.035337433 0.261803274 0.499440853 0.031430248 0.014233101 2.70E-08 7.568757217 0.178506025 TGQAGSLSGS(ph)PKPFSPQLSAPITTK ddPTM_A459_MK2206_30min_R1 2 TGQAGSLSGSPKPFSPQLSAPITTK 25 1 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;A0A087WYS3;Q9ULU4-8;Q9ULU4-17;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 T(0.006)GQAGS(0.056)LS(0.152)GS(0.776)PKPFS(0.008)PQLS(0.001)APITTK;T(0.002)GQAGS(0.009)LS(0.074)GS(0.915)PKPFSPQLSAPITTK 96.634 3.71E-06 178843000 6545.6 7683.3 8265.6 7243.2 4987.7 5311.9 5632.4 7356.7 7775.1 7325.5 TRUE FALSE 5988.862348 7183.115773 7704.554101 7801.072519 4789.029347 5612.655188 5256.672873 7292.381148 8583.349468 8233.038245 0.727418259 0.872474481 0.935809342 0.947532647 0.581684331 0.681723444 0.638485176 0.885746055 1.042549447 1 13.00720921 -8.025654252 5.144945086 1.008735392 0.774665467 0.430902194 0.115602822 0.211910678 15.48890656 0.086485088 0.033969314 9.43E-09 8.025654252 -0.234069925 TGQAGSLSGS(ph)PKPFSPQLSAPITTK ddPTM_A459_MK2206_30min_R2 1 TGQAGSLSGSPKPFSPQLSAPITTK 25 1 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;A0A087WYS3;Q9ULU4-8;Q9ULU4-17;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 TGQAGS(0.055)LS(0.195)GS(0.748)PKPFS(0.002)PQLSAPITTK 86.076 5.03E-05 98374000 47978 43782 49889 42560 46104 32693 56687 41888 32904 58590 TRUE FALSE 51651.23257 41607.84954 51552.27436 39082.71186 44293.72531 33937.15502 49243.92881 47362.90542 35765.93044 56678.2131 0.911306651 0.734106586 0.909560686 0.689554411 0.781494738 0.598768966 0.868833474 0.835645706 0.631034898 1 15.79050665 -10.59699587 24.49950346 1 0.773496563 0.295998601 0.104853991 0 0 0.097526966 0.023653764 2.53E-11 10.59699587 -0.226503437 TGQAGSLSGSPKPFSPQLS(ph)APITTK ddPTM_A459_MK2206_30min_R2 1 TGQAGSLSGSPKPFSPQLSAPITTK 25 1 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;A0A087WYS3;Q9ULU4-8;Q9ULU4-17;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 T(0.001)GQAGS(0.004)LS(0.014)GS(0.044)PKPFS(0.058)PQLS(0.786)APIT(0.071)T(0.021)K 45.972 0.034116 8177800 16576 23784 20850 19347 21362 19501 27509 21592 21870 20940 TRUE FALSE 17845.0713 22602.92115 21545.12859 17766.28821 20523.22054 20243.12422 23897.03526 24414.14854 23772.21307 20256.72951 0.880945332 1.115822825 1.063603509 0.877056101 1.013155679 0.999328357 1.179708464 1.205236439 1.173546453 1 14.30611365 -7.25533115 23.23331376 1.156725882 0.996335141 0.407983199 0.086234527 173.9680498 661709.4409 0.033162273 0.024959865 5.55E-08 7.25533115 -0.160390741 TGQLEGAPAPGPAAS(ph)PQTLDHSGATATGGASELK ddPTM_A459_MK2206_30min_R2 3 TGQLEGAPAPGPAASPQTLDHSGATATGGASELK 34 0 P55317-2;P55317 P55317-2 FOXA1 Hepatocyte nuclear factor 3-alpha 1 TGQLEGAPAPGPAAS(0.899)PQT(0.062)LDHS(0.033)GAT(0.005)AT(0.001)GGASELK;TGQLEGAPAPGPAAS(0.777)PQT(0.222)LDHSGATATGGASELK;TGQLEGAPAPGPAAS(0.907)PQT(0.088)LDHS(0.005)GATATGGASELK 99.061 2.38E-11 70509000 252384 289967 288174 310473 262907 223668 316009 253974 230820 269680 TRUE FALSE 271706.7131 275567.6604 297781.5773 285106.3627 252583.9502 232179.8425 274516.6387 287169.2738 250896.3064 260880.3637 1.041499288 1.056298974 1.141448797 1.092862486 0.968198398 0.889985889 1.052270224 1.100769984 0.961729364 1 17.99302883 -6.252131841 24.43528825 0.998094384 1.085291179 0.354638902 0.057752788 632.8180207 1661348.54 0.018753212 0.02385979 5.60E-07 6.252131841 0.087196795 TGQLEGAPAPGPAASPQT(ph)LDHSGATATGGASELK ddPTM_A459_MK2206_30min_R1 2 TGQLEGAPAPGPAASPQTLDHSGATATGGASELK 34 0 P55317-2;P55317 P55317-2 FOXA1 Hepatocyte nuclear factor 3-alpha 1 TGQLEGAPAPGPAAS(0.446)PQT(0.55)LDHS(0.003)GATATGGASELK;TGQLEGAPAPGPAAS(0.155)PQT(0.838)LDHS(0.006)GAT(0.001)ATGGASELK 147.74 4.84E-27 36189000 6432.7 6359.1 6706 5682.1 6034.2 5626.2 6484.9 6341.1 6436.5 6291.7 TRUE FALSE 5885.565086 5945.121434 6250.815404 6119.736327 5793.845036 5944.750582 6052.304153 6285.660431 7105.597208 7071.163296 0.832333357 0.840755783 0.883986855 0.865449725 0.819362359 0.840703337 0.855913504 0.88891462 1.004869625 1 12.78773186 -8.158877452 2.698374568 1.007493776 0.848942436 0.924080629 0.017384638 0.075205675 0.981579732 0.016499043 0.005089978 6.94E-09 8.158877452 -0.158551339 TGQLEGAPAPGPAASPQT(ph)LDHSGATATGGASELK ddPTM_A459_MK2206_30min_R2 1 TGQLEGAPAPGPAASPQTLDHSGATATGGASELK 34 0 P55317-2;P55317 P55317-2 FOXA1 Hepatocyte nuclear factor 3-alpha 1 TGQLEGAPAPGPAAS(0.202)PQT(0.785)LDHS(0.008)GAT(0.004)AT(0.001)GGASELK 101.82 2.41E-11 8520600 66933 69936 72879 73172 66337 55248 65450 54866 53008 69770 TRUE FALSE 72057.44194 66463.07994 75308.74949 67193.61353 63732.27606 57350.50135 56856.33638 62037.17458 57618.54002 67493.41061 1.06762188 0.984734352 1.115794102 0.995558128 0.944274048 0.849720007 0.84239833 0.919158982 0.853691338 1 16.04245904 -6.291242739 2.371437452 0.885960956 1.048472567 0.629718781 0.05390219 0.179857738 1.98999767 0.017180882 0.02144701 5.11E-07 6.291242739 0.162511611 TGQPAQPAPSAQQPPRPPAS(ph)PDEPSVAASSVGSSR ddPTM_A459_MK2206_30min_R1 4 TGQPAQPAPSAQQPPRPPASPDEPSVAASSVGSSR 35 1 O94964-2 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 TGQPAQPAPS(0.023)AQQPPRPPAS(0.517)PDEPS(0.115)VAAS(0.042)S(0.05)VGS(0.126)S(0.126)R;TGQPAQPAPS(0.114)AQQPPRPPAS(0.765)PDEPS(0.058)VAAS(0.021)S(0.024)VGS(0.009)S(0.009)R;TGQPAQPAPS(0.001)AQQPPRPPAS(0.982)PDEPS(0.017)VAASSVGSSR;TGQPAQPAPS(0.045)AQQPPRPPAS(0.537)PDEPS(0.299)VAAS(0.073)S(0.032)VGS(0.007)S(0.006)R 83.705 2.16E-07 62510000 2710.78 2832.13 3026.13 2845.18 2911.94 2683.7 2597.47 2146.69 2152.06 2103.35 TRUE FALSE 2480.213926 2647.757822 2820.724727 3064.316257 2795.951264 2835.648775 2424.197516 2127.921716 2375.774338 2363.928877 1.049191433 1.120066618 1.193235868 1.296281071 1.182756085 1.199549107 1.025495115 0.900163172 1.005010921 1 11.20697092 -7.388553781 3.908583371 0.964010679 1.177817193 0.678232244 0.065021017 0.145733043 3.864705559 0.031476604 0.020330197 4.09E-08 7.388553781 0.213806514 TGQPAQPAPSAQQPPRPPAS(ph)PDEPSVAASSVGSSR ddPTM_A459_MK2206_30min_R2 2 TGQPAQPAPSAQQPPRPPASPDEPSVAASSVGSSR 35 1 O94964-2 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 TGQPAQPAPS(0.069)AQQPPRPPAS(0.826)PDEPS(0.058)VAAS(0.011)S(0.007)VGS(0.014)S(0.014)R;TGQPAQPAPS(0.021)AQQPPRPPAS(0.87)PDEPS(0.091)VAAS(0.008)S(0.007)VGS(0.002)S(0.002)R 59.093 0.00026424 94083000 69437 67510 70829 82981 81204 67921 83797 72893 65895 70321 TRUE FALSE 74753.15011 64157.55157 73190.40351 76201.18686 78015.52294 70505.78125 72794.35324 82420.36538 71626.42799 68026.43153 1.098883896 0.943126813 1.075911258 1.12017028 1.146841326 1.036446858 1.070089252 1.211593252 1.052920554 1 16.05380779 -5.505833609 23.31740731 1.09904758 1.018133746 0.139993187 0.0665125 455.7853593 623501.6564 0.016823602 0.033631157 3.12E-06 5.505833609 -0.080913834 TGRDT(ph)PENGETAIGAENSEK ddPTM_A459_MK2206_30min_R1 2 TGRDTPENGETAIGAENSEK 20 1 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 T(0.015)GRDT(0.985)PENGETAIGAENSEK;T(0.217)GRDT(0.783)PENGETAIGAENSEK 129.98 0.00023892 80221000 9453.6 10756.7 11209.8 7796 8169.9 8182.3 10763.9 8891.2 11418.7 13086.9 TRUE FALSE 8649.521677 10056.43687 10448.91001 8396.449271 7844.475583 8645.574755 10045.85987 8813.465176 12605.71473 14708.20397 0.588074635 0.683729767 0.710413727 0.570868427 0.533340141 0.587806286 0.683010644 0.599221033 0.857053298 1 13.84433347 -8.435260961 2.87110687 0.998518917 0.6204145 0.844414691 0.054594618 0.094893924 1.579567976 0.056824821 0.015318355 3.67E-09 8.435260961 -0.378104417 TGRDT(ph)PENGETAIGAENSEK ddPTM_A459_MK2206_30min_R2 3 TGRDTPENGETAIGAENSEK 20 1 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 T(0.289)GRDT(0.711)PENGETAIGAENSEK;T(0.263)GRDT(0.737)PENGETAIGAENSEK;T(0.214)GRDT(0.786)PENGETAIGAENSEK 184.53 6.90E-14 98268500 235503 189075 204175 204887 186228 153835 207080 171732 134600 224742 TRUE FALSE 253533.2908 179685.8104 210982.0926 188147.0767 178915.753 159689.2987 179890.1473 194177.962 146307.2647 217408.6869 1.166159891 0.826488642 0.97044003 0.865407355 0.822946661 0.734512043 0.827428516 0.893147209 0.672959608 1 17.73005006 -1.931876331 1.07998028 0.830155873 200 0.487555566 0.095432902 813.6246731 2.051614576 0.028094102 400031.6145 0.011698325 1.931876331 199.1698441 TGS(ph)CSELDACPSK ddPTM_A459_MK2206_30min_R1 3 TGSCSELDACPSK 13 0 A0A1B0GUA8;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2;Q9H1H9;H0Y9Z7 A0A1B0GUA8 KIF13A Kinesin-like protein KIF13A 1 T(0.018)GS(0.771)CS(0.211)ELDACPSK;T(0.185)GS(0.631)CS(0.185)ELDACPSK;T(0.022)GS(0.758)CS(0.221)ELDACPSK 234.04 1.56E-13 58764000 10754.5 10790.2 12727.2 9819.1 6831.2 5769.8 8828.3 8995 8641.2 9034.2 TRUE FALSE 9839.773301 10087.75602 11863.31312 10575.36878 6559.098839 6096.48109 8239.380215 8916.357663 9539.483663 10153.4249 0.969108788 0.993532342 1.168405069 1.041556803 0.645998656 0.600435927 0.811487778 0.878162566 0.939533582 1 13.30967883 -6.231212883 20.86425784 0.795847203 1.048553896 0.449959181 0.123990689 85.00308458 58673.51618 0.039244283 0.050643952 5.87E-07 6.231212883 0.252706693 TGS(ph)CSELDACPSK ddPTM_A459_MK2206_30min_R2 3 TGSCSELDACPSK 13 0 A0A1B0GUA8;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2;Q9H1H9;H0Y9Z7 A0A1B0GUA8 KIF13A Kinesin-like protein KIF13A 1 T(0.039)GS(0.694)CS(0.267)ELDACPSK;T(0.185)GS(0.631)CS(0.185)ELDACPSK;T(0.066)GS(0.904)CS(0.03)ELDACPSK 205.62 1.62E-05 131568000 354284 321937 336672 265922 283514 185983 374042 262075 196466 282670 TRUE FALSE 381408.2554 305950.0767 347896.4764 244195.322 272381.8158 193060.7134 324929.8361 296329.1023 213554.2576 273446.501 1.394818562 1.118866307 1.272265233 0.893027781 0.996106422 0.706027368 1.188275713 1.083682187 0.780972719 1 18.06089908 -5.756983444 24.98032518 0.954932001 1.247671733 0.49311656 0.14479218 99.75012802 559198.0323 0.039602405 0.065703846 1.75E-06 5.756983444 0.292739732 TGS(ph)ES(ph)SQTGTSTTSSR ddPTM_A459_MK2206_30min_R1 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 T(0.228)GS(0.772)ES(0.914)S(0.084)QT(0.002)GTSTTSSR 139.21 0.0073285 16117000 2702.3 3490 3456.8 2923.3 2024.2 1930.6 2782.4 2903.7 4014.2 4124.6 TRUE FALSE 2472.455195 3262.800366 3222.162047 3148.453073 1943.571828 2039.908904 2596.791173 2878.313257 4431.490455 4635.586587 0.533364041 0.703859221 0.695092625 0.679191945 0.419272036 0.440054104 0.5601861 0.620916728 0.955971887 1 12.17853619 -8.262261235 3.619925823 0.999591412 0.578454184 0.746377203 0.092938817 0.127326919 3.477222478 0.093973502 0.027422425 5.47E-09 8.262261235 -0.421137228 TGS(ph)ESSQTGTSTTSSR ddPTM_A459_MK2206_30min_R1 5 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 T(0.001)GS(0.997)ES(0.001)S(0.001)QTGTSTTSSR;T(0.001)GS(0.896)ES(0.093)S(0.01)QTGTSTTSSR;T(0.057)GS(0.933)ES(0.01)SQTGTSTTSSR;T(0.164)GS(0.416)ES(0.416)S(0.004)QTGTSTTSSR;T(0.022)GS(0.326)ES(0.326)S(0.326)QT(0.001)GTSTTSSR 291.06 1.12E-74 459160470 3022.2 4780.582 4538.56 4288.67 2732.15 1785.43 3270.97 3157.62 3808.17 4384.37 TRUE FALSE 2765.14602 4469.365243 4230.495192 4618.984106 2623.32268 1886.519504 3052.76956 3130.013261 4204.042899 4927.538856 0.561161688 0.907017757 0.858541214 0.937381569 0.532379907 0.382852284 0.619532316 0.635208235 0.853172958 1 12.26665153 -6.263056787 24.99903116 0.635351498 0.825561832 0.110832269 0.185784232 252.4483153 3901887.806 0.056824939 0.067863252 5.46E-07 6.263056787 0.190210334 TGS(ph)ESSQTGTSTTSSR ddPTM_A459_MK2206_30min_R2 7 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 T(0.003)GS(0.996)ES(0.002)SQTGTSTTSSR;T(0.137)GS(0.531)ES(0.303)S(0.03)QTGTSTTSSR;T(0.136)GS(0.864)ESSQTGTSTTSSR;T(0.163)GS(0.836)ESSQTGTSTTSSR;T(0.215)GS(0.473)ES(0.22)S(0.069)QT(0.022)GT(0.001)STTSSR;T(0.004)GS(0.9)ES(0.078)S(0.016)QT(0.002)GTSTTSSR;T(0.068)GS(0.93)ES(0.002)SQTGTSTTSSR 293.77 6.07E-75 2155537500 100198.18 130851.38 112056.07 91324.27 91764.19 67976.77 107238.5 92850.21 96152.6 110225.64 TRUE FALSE 107869.4297 124353.4907 115791.9634 83862.78501 88161.06682 70563.67362 93157.95613 104986.0512 104515.7793 106628.9864 1.011633265 1.166225948 1.085933266 0.78649144 0.826802071 0.661768211 0.873664463 0.98459204 0.980181683 1 16.70224015 -5.747807511 24.37244317 0.861971951 1.095760515 0.471036744 0.103611199 150.4916363 269060.9668 0.030259662 0.052025517 1.79E-06 5.747807511 0.233788564 TGS(ph)GQGPSSTGQPGR ddPTM_A459_MK2206_30min_R1 1 TGSGQGPSSTGQPGR 15 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 T(0.129)GS(0.425)GQGPS(0.129)S(0.306)T(0.012)GQPGR 166.67 7.80E-05 8046100 668.51 664.36 923.26 804.06 387.41 575.68 618.49 644.63 708.71 715.44 TRUE FALSE 611.649714 621.1100432 860.5916835 865.9888405 371.9786393 608.2745041 577.2316606 638.9940679 782.3829406 804.0741085 0.760688235 0.772453729 1.070289012 1.077001276 0.462617358 0.756490599 0.717883656 0.79469549 0.973023422 1 9.651184665 -8.290794194 5.4436858 0.99217191 0.802898327 0.166381063 0.165780481 0.392266629 34.23632335 0.160633945 0.044945256 5.12E-09 8.290794194 -0.189273584 TGS(ph)GQGPSSTGQPGR ddPTM_A459_MK2206_30min_R2 1 TGSGQGPSSTGQPGR 15 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 T(0.031)GS(0.926)GQGPS(0.012)S(0.012)T(0.018)GQPGR 73.666 0.042482 16286000 6192.2 5444.4 7902.4 5637.9 2292.5 2863.5 4434.8 3573.3 5060 5104.2 TRUE FALSE 6666.279593 5174.039013 8165.862072 5177.265535 2202.484931 2972.472499 3852.505433 4040.342579 5500.109654 4937.650372 1.350091459 1.047874722 1.653795116 1.048528175 0.446059313 0.602001413 0.780230503 0.818272311 1.113912335 1 12.26960897 -5.999996214 24.99999988 0.771659954 1.325456913 0.55785454 0.221762608 0.106177803 665364.1311 0.063519072 0.093139229 1.00E-06 5.999996214 0.553796958 TGS(ph)GSPFAGNSPAR ddPTM_A459_MK2206_30min_R1 2 TGSGSPFAGNSPAR 14 0 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 T(0.117)GS(0.836)GS(0.046)PFAGNSPAR;T(0.194)GS(0.475)GS(0.211)PFAGNS(0.12)PAR 155.26 0.00032975 82465000 4481.8 5529.8 4980.8 4244.9 4832.1 4269.8 4251.5 4151.9 4126.6 3965.4 TRUE FALSE 4100.599375 5169.809015 4642.717173 4571.842934 4639.627225 4511.552386 3967.890192 4115.600376 4555.574837 4456.663689 0.920105187 1.160017757 1.041747257 1.025844276 1.041053925 1.012316096 0.890327489 0.923471158 1.02219399 1 12.12174838 -7.039608925 6.770495527 0.952098377 1.042582128 0.24874136 0.063973421 0.272258921 36.15621746 0.023632008 0.018635588 9.13E-08 7.039608925 0.090483751 TGS(ph)HSEPQAR ddPTM_A459_MK2206_30min_R2 1 TGSHSEPQAR 10 0 Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A0C4DH52;Q9NZB2-2;Q9NZB2-5 Q9NZB2-4 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 T(0.002)GS(0.995)HS(0.002)EPQAR 106.26 0.012011 1131600 6048 5656.7 5723.1 5213.1 5246.7 2900 4689.1 4695.6 4093.4 4952.2 TRUE FALSE 6511.03953 5375.796504 5913.905298 4787.173054 5040.688195 3010.361532 4073.415537 5309.331042 4449.436533 4790.61012 1.359125324 1.122152788 1.234478522 0.999282541 1.052201717 0.628387921 0.850291599 1.108278676 0.928782853 1 12.22599369 -5.884904505 1.634136541 0.911252199 1.247874942 0.52211982 0.133132677 0.322682966 1.754491395 0.046011838 0.087242444 1.30E-06 5.884904505 0.336622743 TGS(ph)PGDAPERPPLCDFSEGLSAPMDFYR ddPTM_A459_MK2206_30min_R1 1 TGSPGDAPERPPLCDFSEGLSAPMDFYR 28 1 Q8IWE5;Q5VVD7;A0A2R8Y575 Q8IWE5 PLEKHM2 Pleckstrin homology domain-containing family M member 2 1 T(0.243)GS(0.72)PGDAPERPPLCDFS(0.006)EGLS(0.031)APMDFYR 61.709 0.0016525 7294500 426.59 401.37 354.08 456.32 280.63 223.99 419.38 386 373.29 337.66 TRUE FALSE 390.3062804 375.24074 330.0460361 491.4658455 269.4519129 236.6721202 391.4039254 382.6252427 412.0948313 379.49187 1.028497081 0.988797837 0.869705156 1.29506291 0.710033427 0.623655311 1.031389488 1.008256758 1.085912147 1 8.567925168 -10.59538882 13.83484938 1 0.954436213 0.003482389 0.180312157 0 0 0.181079816 0.043918307 2.54E-11 10.59538882 -0.045563787 TGS(ph)PGPELLFHEGQQK ddPTM_A459_MK2206_30min_R1 4 TGSPGPELLFHEGQQK 16 0 A6NHN7;A6NHB5;Q14202-2;Q14202;A6NL54;Q14202-3 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 T(0.03)GS(0.97)PGPELLFHEGQQK;T(0.403)GS(0.597)PGPELLFHEGQQK;T(0.412)GS(0.588)PGPELLFHEGQQK;T(0.424)GS(0.576)PGPELLFHEGQQK 166.21 1.11E-05 36451300 17839.7 21081.4 20992.8 17624.4 13593.3 11932.3 15937.8 14883.6 18805.9 17458.4 TRUE FALSE 16322.33984 19708.99703 19567.86723 18981.83434 13051.85008 12607.89651 14874.61844 14753.47425 20760.8406 19621.2784 0.831869336 1.004470587 0.997277895 0.967410683 0.665188568 0.64256244 0.758086101 0.751911978 1.058077878 1 14.26013142 -6.231408162 23.76295276 0.789002062 0.957488207 0.192530841 0.132550698 532.2200225 421131.5279 0.039687429 0.051226587 5.87E-07 6.231408162 0.168486145 TGS(ph)PGPELLFHEGQQK ddPTM_A459_MK2206_30min_R2 1 TGSPGPELLFHEGQQK 16 0 A6NHN7;A6NHB5;Q14202-2;Q14202;A6NL54;Q14202-3 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 T(0.051)GS(0.949)PGPELLFHEGQQK 134.83 0.00027717 17270000 86147 107630 80629 81719 72357 57253 99632 70382 54178 81830 TRUE FALSE 92742.48056 102285.2507 83317.13062 75042.29629 69515.90062 59431.80303 86550.19872 79581.16906 58890.30451 79159.8938 1.171584196 1.292134764 1.052516958 0.947983792 0.878170716 0.750781743 1.093359207 1.005321827 0.743941176 1 16.27248206 -5.527972646 2.641041162 0.914986471 1.232006324 0.57777625 0.106987824 0.196035422 2.727331836 0.030792171 0.068966366 2.97E-06 5.527972646 0.317019852 TGS(ph)PGSPGAGGVQSTAK ddPTM_A459_MK2206_30min_R2 1 TGSPGSPGAGGVQSTAK 17 0 O43237-2;O43237;J3KRZ2;J3KRI4 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 T(0.161)GS(0.808)PGS(0.031)PGAGGVQSTAK 116.06 0.0016368 11357000 20619 18095 16133 19536 16192 12581 18233 11330 12173 20103 TRUE FALSE 22197.60649 17196.42861 16670.86617 17939.84631 15556.22072 13059.77877 15838.9852 12810.8699 13231.78554 19447.04076 1.141438781 0.884269685 0.857244368 0.922497491 0.799927399 0.671556096 0.81446763 0.658756778 0.680400977 1 14.24726302 -1.522878745 0.540800457 0.755225406 16.06896785 0.5022701 0.103298988 100.8757646 0.950964842 0.051012089 1787.806903 0.03 1.522878745 15.31374244 TGS(ph)PTFVR ddPTM_A459_MK2206_30min_R1 1 TGSPTFVR 8 0 Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;Q9UPP1-5;B0QZZ4;Q5JPR8;B0QZZ2;B0QZZ3;B0QZE1 Q9UPP1-4 PHF8 Histone lysine demethylase PHF8 1 T(0.014)GS(0.977)PT(0.009)FVR 96.665 0.020894 5922300 8349.7 4693.2 4292 3427.3 11284 11239 11118 8312.5 3835.7 3596.7 TRUE FALSE 7639.514169 4387.671827 4000.670998 3691.27124 10834.53439 11875.34247 10376.33851 8239.824689 4234.434741 4042.28635 1.889899307 1.0854431 0.989704997 0.913164215 2.680298586 2.937778633 2.566947912 2.038406975 1.047534582 1 11.98095581 -6.252991838 24.97618493 2.167801684 1.1935559 0.265567357 0.653230058 764.7245885 2261000.071 0.201405387 0.255743789 5.58E-07 6.252991838 -0.974245784 TGS(ph)PTFVR ddPTM_A459_MK2206_30min_R2 1 TGSPTFVR 8 0 Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;Q9UPP1-5;B0QZZ4;Q5JPR8;B0QZZ2;B0QZZ3;B0QZE1 Q9UPP1-4 PHF8 Histone lysine demethylase PHF8 1 T(0.223)GS(0.725)PT(0.052)FVR 102.07 0.016524 4883100 36282 45311 31166 43882 39690 38612 43052 36625 31614 37585 TRUE FALSE 39059.77782 43060.92163 32205.05888 40296.70023 38131.57117 40081.40672 37399.22069 41412.01325 34363.72857 36358.60453 1.074292546 1.184339228 0.885761687 1.10831262 1.04876333 1.102391229 1.028620905 1.138987972 0.945133319 1 15.15000921 TGS(ph)QGQCTQVR ddPTM_A459_MK2206_30min_R1 2 TGSQGQCTQVR 11 0 P62857 P62857 RPS28 40S ribosomal protein S28 1 T(0.26)GS(0.729)QGQCT(0.012)QVR;T(0.123)GS(0.687)QGQCT(0.19)QVR 146.59 0.00068154 10341900 1582.52 1971.61 1979.75 1481.73 1226.19 1153.49 1362.73 1454.74 1116.14 1276.01 TRUE FALSE 1447.918364 1843.257831 1845.370086 1595.853101 1177.348256 1218.799607 1271.824768 1442.021362 1232.166747 1434.091752 1.009641372 1.285313738 1.286786625 1.112797071 0.82097136 0.849875613 0.886850347 1.00552936 0.859196593 1 10.48592161 -6.096051825 4.573164767 0.901705548 1.203137982 0.681201912 0.091452432 0.125481357 4.400817023 0.027489227 0.036479908 8.02E-07 6.096051825 0.301432435 TGS(ph)SGALGPPER ddPTM_A459_MK2206_30min_R1 1 TGSSGALGPPER 12 0 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 T(0.222)GS(0.469)S(0.309)GALGPPER 92.906 0.021027 8705600 1800.8 2123 2278.9 1863.3 1953.1 1717.1 1781.4 1870.9 1860.5 1707.2 TRUE FALSE 1647.632504 1984.792314 2124.214617 2006.811689 1875.303891 1814.320718 1662.566056 1854.542919 2053.905633 1918.700825 0.858722987 1.034445959 1.107110911 1.045922148 0.977382126 0.94559855 0.866506146 0.966561798 1.070466853 1 10.90591406 -6.44276512 5.619908413 0.961248025 1.019673911 0.055111108 0.075597187 0.550453552 29.36068341 0.02506711 0.028247045 3.61E-07 6.44276512 0.058425886 TGS(ph)TSSKEDDYESDAATIVQK ddPTM_A459_MK2206_30min_R2 2 TGSTSSKEDDYESDAATIVQK 21 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.038)GS(0.469)T(0.34)S(0.076)S(0.076)KEDDY(0.001)ESDAATIVQK;T(0.04)GS(0.65)T(0.139)S(0.031)S(0.139)KEDDYESDAATIVQK 88.471 0.00048408 83891000 205324 228508 211821 161516 146465 90761 184508 128781 99516 159198 TRUE FALSE 221043.7633 217160.625 218883.0064 148319.6261 140714.0482 94214.97345 160281.878 145613.1189 108171.7218 154003.3823 1.435317589 1.410102959 1.421287008 0.963093303 0.913707518 0.611772106 1.040768557 0.945518967 0.702398351 1 17.23260251 -5.813711085 3.612815927 0.866998302 1.429138914 0.804510507 0.122544674 0.094231852 2.504607615 0.035451557 0.057694291 1.54E-06 5.813711085 0.562140612 TGS(ph)YGALAEITASK ddPTM_A459_MK2206_30min_R1 2 TGSYGALAEITASK 14 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 T(0.026)GS(0.972)YGALAEIT(0.002)ASK;T(0.008)GS(0.992)YGALAEITASK 225.29 1.04E-09 285222000 7645.7 9913.7 8702.4 7276 6054.2 5197.4 6548.4 6985 7963.8 7416.2 TRUE FALSE 6995.393066 9268.316328 8111.705334 7836.398781 5813.048394 5491.672296 6111.568184 6923.930881 8791.665509 8334.974845 0.839281845 1.11197892 0.973212935 0.940182655 0.697428427 0.65887089 0.733243747 0.830708072 1.054792087 1 13.02496213 -6.071878634 6.396550402 0.807513477 0.983793901 0.195772426 0.132644223 0.327117595 23.62333301 0.040525791 0.052969209 8.47E-07 6.071878634 0.176280424 TGS(ph)YGALAEITASK ddPTM_A459_MK2206_30min_R2 4 TGSYGALAEITASK 14 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4;H0YHI8 O14974-5;H0YHI8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 T(0.017)GS(0.983)YGALAEITASK;T(0.033)GS(0.967)YGALAEITASK;T(0.003)GS(0.997)YGALAEITASK;T(0.225)GS(0.775)YGALAEITASK 222.75 4.53E-09 208245400 384123 319457.6 326798.7 267226.3 284576.2 174160.3 362637.1 258057.8 196480.5 310295 TRUE FALSE 413531.7522 303593.8001 337694.0056 245393.0565 273402.3085 180788.0923 315022.4132 291786.8405 213570.0187 300170.0996 1.377658044 1.011405868 1.125008807 0.817513326 0.910824592 0.602285479 1.049479657 0.972071638 0.711496645 1 18.19542075 -3.605989503 0.758502308 0.866239458 3.80524478 0.525008774 0.142322874 10.77958304 1.207580271 0.052769066 40.53957752 0.000247748 3.605989503 2.939005321 TGSCS(ph)ELDACPSK ddPTM_A459_MK2206_30min_R1 1 TGSCSELDACPSK 13 0 A0A1B0GUA8;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2;Q9H1H9;H0Y9Z7 A0A1B0GUA8 KIF13A Kinesin-like protein KIF13A 1 T(0.025)GS(0.281)CS(0.694)ELDACPSK 145.52 0.00062499 20758000 4719.4 5445.6 5478.3 4713.9 3542.1 2381.2 3554.7 3731.3 5099.7 4342.2 TRUE FALSE 4317.990247 5091.09045 5106.448259 5076.965395 3401.010656 2516.021486 3317.572449 3698.677637 5629.832064 4880.144518 0.884807864 1.043225345 1.046372344 1.040330953 0.696907775 0.515562905 0.679810288 0.757903301 1.153619948 1 12.25270816 -6.255417042 24.46667119 0.768234456 1.009557671 0.236847625 0.172653288 484.8619772 1969823.239 0.053779973 0.06755537 5.55E-07 6.255417042 0.241323216 TGSDHTNPT(ph)SPLLVKPSDLLEENK ddPTM_A459_MK2206_30min_R1 1 TGSDHTNPTSPLLVKPSDLLEENK 24 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;Q96D71;Q96D71-3;H0YE73 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 TGSDHT(0.018)NPT(0.49)S(0.49)PLLVKPSDLLEENK 68.42 0.0027945 10006000 1082.7 1072.2 1182.5 910.04 980.03 1066.7 1274 849.73 879.71 937.71 TRUE FALSE 990.6106795 1002.399585 1102.235195 980.1314385 940.9933299 1127.095632 1189.013785 842.3009002 971.1590026 1053.880594 0.939964817 0.951151004 1.045882428 0.930021336 0.892884199 1.069471853 1.128224384 0.799237508 0.921507624 1 10.0414957 -7.777520071 24.99994817 0.895279512 0.990854299 0.188530001 0.081500097 402.9636404 626460.7814 0.04555803 0.021993651 1.67E-08 7.777520071 0.095574787 TGSDHTNPT(ph)SPLLVKPSDLLEENK ddPTM_A459_MK2206_30min_R2 2 TGSDHTNPTSPLLVKPSDLLEENK 24 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;Q96D71;Q96D71-3;H0YE73 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 TGSDHTNPT(0.496)S(0.496)PLLVKPS(0.008)DLLEENK;TGSDHTNPT(0.5)S(0.5)PLLVKPSDLLEENK 85.224 6.18E-05 17461200 65405 84962 75621 97281 83240 76303 115105 67332 67284 73046 TRUE FALSE 70412.45709 80742.91063 78142.1664 89332.83111 79971.57935 79206.76413 99991.57523 76132.52359 73136.2407 70662.515 0.996461237 1.142655489 1.105850342 1.264218109 1.131739782 1.12091629 1.415058256 1.07741033 1.035007609 1 16.10865748 -7.988033022 24.99910061 1.030405403 1.171019532 0.258165154 0.104288982 296.8520251 620125.7243 0.057770565 0.027720095 1.03E-08 7.988033022 0.140614128 TGSDHTNPT(ph)SPLLVKPSDLLEENKINSSVK ddPTM_A459_MK2206_30min_R2 1 TGSDHTNPTSPLLVKPSDLLEENKINSSVK 30 2 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;Q96D71;Q96D71-3;H0YE73 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 T(0.001)GS(0.001)DHT(0.005)NPT(0.757)S(0.221)PLLVKPS(0.016)DLLEENKINS(0.001)S(0.001)VK 53.1 0.011699 5943200 7847.4 18160 11961 21779 24737 17495 22633 15321 19889 13068 TRUE FALSE 8448.202978 17258.20081 12359.77377 19999.58603 23765.70109 18160.78448 19661.25991 17323.5073 21618.90927 12641.59223 0.668286306 1.365192018 0.977707044 1.582046444 1.879961057 1.436589961 1.555283508 1.370358021 1.710141324 1 13.62589056 -4.519226813 0.938213117 1.51485783 7.52E-15 0.427727816 0.266420669 2.963777468 1.485796072 0.087605895 5.13614962 3.03E-05 4.519226813 -1.51485783 TGSEPALS(ph)PAVVR ddPTM_A459_MK2206_30min_R1 1 TGSEPALSPAVVR 13 0 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 TGSEPALS(1)PAVVR 147.52 0.00057106 16952000 1713.6 1871.6 1594.4 1212.6 1746.8 1438.3 1766.1 1723.3 1725.8 1145.8 TRUE FALSE 1567.849322 1749.7585 1486.17657 1305.994662 1677.221257 1519.735303 1648.286691 1708.23337 1905.203086 1287.750354 1.217510301 1.358771515 1.154087487 1.014167581 1.302442862 1.180147455 1.279973782 1.326525257 1.479481702 1 10.33063722 -7.389360263 4.60305376 1.302408059 1.205223104 0.036052865 0.140146399 0.60173658 19.84586258 0.060429031 0.039636636 4.08E-08 7.389360263 -0.097184955 TGSEPALS(ph)PAVVR ddPTM_A459_MK2206_30min_R2 4 TGSEPALSPAVVR 13 0 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 TGSEPALS(1)PAVVR;TGS(0.001)EPALS(0.999)PAVVR;TGSEPALS(1)PAVVR;TGSEPALS(1)PAVVR 193.11 0.0001842 121526800 95485 111154 105567 116602 116005 100192 124598 87449 98001 116221 TRUE FALSE 102795.405 105634.254 109086.5511 107075.2436 111450.0608 104004.8768 108238.1329 98878.88456 106524.9498 112428.7183 0.914316258 0.93956647 0.970273012 0.952383388 0.991295307 0.925073934 0.962726735 0.879480671 0.947488786 1 16.77865107 -6.476519108 0.002672735 1.890863825 1.04E-05 0.078572835 0.032885101 214098.6713 185.6804122 65088.25315 66270.92231 3.34E-07 6.476519108 -1.89085344 TGSES(ph)PKVCSDQSSGSGTGK ddPTM_A459_MK2206_30min_R1 2 TGSESPKVCSDQSSGSGTGK 20 1 O15169-2;O15169 O15169-2 AXIN1 Axin-1 1 T(0.026)GS(0.037)ES(0.627)PKVCS(0.302)DQS(0.003)S(0.003)GS(0.001)GT(0.002)GK;T(0.009)GS(0.024)ES(0.52)PKVCS(0.422)DQS(0.011)S(0.011)GS(0.002)GT(0.002)GK 58.92 0.018698 16080100 5695.7 6070.8 6903.3 6453.2 5121.7 3987.8 4277.6 6061.3 4134.4 3214.4 TRUE FALSE 5211.250806 5675.589817 6434.72323 6950.226582 4917.691844 4213.58579 3992.249109 6008.306693 4564.185675 3612.624139 1.442511206 1.57104354 1.781177056 1.923872043 1.361252002 1.16635045 1.105082886 1.663141933 1.263398986 1 11.81883145 -6.439535624 6.768464697 1.271544447 1.677715341 0.515431983 0.201036426 0.231841875 15.93740042 0.065477133 0.0740333 3.63E-07 6.439535624 0.406170894 TGSES(ph)PKVCSDQSSGSGTGK ddPTM_A459_MK2206_30min_R2 2 TGSESPKVCSDQSSGSGTGK 20 1 O15169-2;O15169 O15169-2 AXIN1 Axin-1 1 T(0.022)GS(0.052)ES(0.925)PKVCS(0.002)DQSSGSGTGK;T(0.019)GS(0.019)ES(0.955)PKVCS(0.007)DQSSGSGTGK 101.28 0.00039029 14689100 28304 51627 43841 42167 56013 38170 59812 36426 43840 44911 TRUE FALSE 30470.976 49063.27825 45302.63706 38721.82121 53813.64818 39622.5861 51958.61255 41187.00327 47653.12396 43445.55775 0.701359991 1.129304831 1.042744976 0.891272278 1.238645582 0.912005465 1.195947647 0.948014145 1.096846868 1 15.40692105 -4.753367063 24.99974964 1.049780486 0.701359354 0.472358464 0.110709105 249.3813075 772266.5965 0.025153937 0.273542491 1.76E-05 4.753367063 -0.348421132 TGSES(ph)SQTGTSTTSSR ddPTM_A459_MK2206_30min_R1 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 TGS(0.169)ES(0.409)S(0.409)QT(0.01)GT(0.001)S(0.001)TTSSR 150.12 0.00023929 25407000 530.89 654.5 664.92 603.9 563.08 526.36 759.13 784.33 509.14 625.74 TRUE FALSE 485.7350177 611.891931 619.787083 650.4124826 540.6513313 556.1620483 708.4898228 777.4726855 562.066925 703.2613953 0.690689153 0.87007752 0.881304003 0.92485168 0.768777207 0.790832615 1.007434544 1.105524476 0.799229033 1 9.457917214 -7.265215699 24.71931002 0.986840728 0.828391223 0.400261744 0.093621433 295.815714 1936358.608 0.037950858 0.026716439 5.43E-08 7.265215699 -0.158449504 TGSES(ph)SQTGTSTTSSR ddPTM_A459_MK2206_30min_R2 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 T(0.416)GS(0.021)ES(0.471)S(0.09)QT(0.002)GTSTTSSR 186.17 8.00E-07 3781800 916.72 818.71 424.92 460.72 968.83 0 1292.6 0 0 714.97 TRUE FALSE 986.904788 778.0540519 439.0866207 423.0777022 930.7888662 0 1122.880067 0 0 691.6405875 1.426904097 1.12493984 0.634847967 0.61170167 1.345769585 0 1.623502275 0 0 1 9.433878723 -1.522878746 0.439783916 0.554262518 19.04890864 0.186930593 0.532841119 143.5575771 1.768289006 0.337474214 2368.267209 0.03 1.522878746 18.49464612 TGSESS(ph)QTGTSTTSSR ddPTM_A459_MK2206_30min_R1 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 TGSES(0.008)S(0.829)QT(0.016)GT(0.032)S(0.065)T(0.043)T(0.006)SSR 135.57 0.00041208 24962000 190.27 345.87 386.82 139.68 353.38 309.58 370.79 386.82 161.62 197.73 TRUE FALSE 174.0865374 323.3538001 360.5637361 150.4381778 339.3041263 327.1081521 346.0552756 383.4380735 178.4209774 222.2262852 0.783375095 1.455065497 1.622507148 0.676959423 1.526840653 1.471959772 1.557220269 1.725439784 0.802879719 1 7.79588566 -4.754636811 24.84519098 1.346798254 0.783374053 0.17146946 0.344712235 368.7506005 1346666.673 0.083636229 0.796324519 1.76E-05 4.754636811 -0.563424201 TGSESS(ph)QTGTSTTSSR ddPTM_A459_MK2206_30min_R2 2 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 T(0.026)GS(0.026)ES(0.202)S(0.743)QT(0.003)GT(0.001)STTSSR;T(0.02)GS(0.011)ES(0.062)S(0.564)QT(0.007)GTST(0.001)T(0.271)S(0.032)S(0.031)R 184.87 8.00E-07 9016800 14278.3 19549.7 14063.4 19895 16609.9 15351.8 15085.2 13080.35 15224.1 16201.5 TRUE FALSE 15371.45763 18578.89033 14532.26674 18269.51486 15957.71187 15936.02351 13104.49512 14789.99666 16548.2647 15672.84638 0.980770005 1.185419028 0.92722575 1.165679444 1.018175734 1.016791916 0.836127325 0.943670109 1.055855733 1 13.93597959 -6.848823675 2.961447436 0.952588127 1.06362658 0.196346215 0.089454994 0.370152012 6.548595394 0.032526867 0.028763152 1.42E-07 6.848823675 0.111038454 TGSESSQTGTSTT(ph)SSR ddPTM_A459_MK2206_30min_R1 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 TGSESS(0.004)QTGTS(0.07)T(0.029)T(0.776)S(0.096)S(0.024)R 172.42 1.48E-05 1177300 527.49 526.8 598.78 515.48 451.46 377.6 431.21 417.48 224.72 348.85 TRUE FALSE 482.6242055 492.5052242 558.1364819 555.1823589 433.4773922 398.9793857 402.4447677 413.8300164 248.0804482 392.0681717 1.230970123 1.256172421 1.423569987 1.416035269 1.105617399 1.017627582 1.026466305 1.055505257 0.632748247 1 8.614960718 -6.573428211 2.173458521 0.945368016 1.332138638 0.673222186 0.126012845 0.196080967 1.87743595 0.047576161 0.049583769 2.67E-07 6.573428211 0.386770621 TGSESSQTGTSTT(ph)SSR ddPTM_A459_MK2206_30min_R2 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 TGSESSQTGTST(0.002)T(0.841)S(0.134)S(0.023)R 97.291 0.01801 5097100 8655.9 7957.9 6781 10051 8853.8 8497.4 11082 8685.7 6869.2 9908.9 TRUE FALSE 9318.602359 7562.722258 7007.075156 9229.801148 8506.155325 8820.774511 9626.920088 9820.950812 7466.670599 9585.573405 0.972148662 0.788969208 0.73100219 0.962884614 0.887391392 0.920213548 1.004313428 1.024555381 0.778948769 1 13.22664902 -5.787906384 24.97775197 0.940474825 0.826532859 0.246300291 0.087321543 285.1482463 269102.3134 0.024522303 0.036384476 1.63E-06 5.787906384 -0.113941966 TGSESSQTGTSTTS(ph)SR ddPTM_A459_MK2206_30min_R1 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 TGSESSQTGTS(0.004)T(0.062)T(0.062)S(0.565)S(0.307)R 98.552 0.0070249 1270700 537.9 607.45 463.4 576.63 450.51 392.17 653.63 557.5 180.44 620.09 TRUE FALSE 492.1487804 567.9048946 431.9456991 621.0421425 432.5652327 414.3743265 610.0275353 552.6258363 199.1973837 696.9114306 0.706185548 0.81488819 0.619799992 0.891134964 0.620688962 0.594586784 0.875330076 0.79296423 0.285828837 1 9.444831508 -10.83075293 5.252644604 1.00006935 0.700400469 0.231768873 0.16870255 0.000132317 1.74E-05 0.15775053 0.038251296 1.48E-11 10.83075293 -0.299668881 TGSESSQTGTSTTS(ph)SR ddPTM_A459_MK2206_30min_R2 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 TGSESSQTGTS(0.001)T(0.004)T(0.448)S(0.47)S(0.076)R 103.87 0.0067932 0 1270.3 695.52 668.8 870.7 693.1 571.95 611.8 877.82 648.89 793.71 TRUE FALSE 1367.555145 660.9814882 691.0974582 799.5610248 665.8854115 593.715958 531.4699251 992.554088 705.3292793 767.8113077 1.781108367 0.860864488 0.900087627 1.041350937 0.867251374 0.773257638 0.692188197 1.292705744 0.918623198 1 9.584607997 -4.75882358 24.99966781 0.925182122 1.781109501 0.732370472 0.154822261 37.74105763 360625.9172 0.039627329 0.263408984 1.74E-05 4.75882358 0.855927378 TGSESSQTGTSTTSSR ddPTM_A459_MK2206_30min_R2 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 233.52 3.16E-63 0 0 0 0 0 0 0 0 0 0 0 FALSE TRUE 0 0 0 0 0 0 0 0 0 0 0 TGSET(ph)PQAPMSGVGPVSGGPGGFGR ddPTM_A459_MK2206_30min_R2 1 TGSETPQAPMSGVGPVSGGPGGFGR 25 0 Q8WXF1 Q8WXF1 PSPC1 Paraspeckle component 1 1 T(0.001)GS(0.001)ET(0.998)PQAPMSGVGPVSGGPGGFGR 191.5 4.70E-27 0 6773.9 7698.9 8458.7 9156.2 6586.4 8053.3 7327.1 7120.4 5837.8 8513.8 TRUE FALSE 7292.514992 7316.583821 8740.708836 8408.109171 6327.784842 8359.773975 6365.042969 8051.060728 6345.561292 8235.995403 0.885444277 0.888366671 1.061281413 1.020897749 0.768308448 1.015028975 0.772832263 0.977545559 0.770466833 1 13.00772731 -6.228463074 24.90394796 0.883897578 0.96554416 0.130038125 0.101296625 1287.472816 972308.8857 0.028651595 0.03698689 5.91E-07 6.228463074 0.081646582 TGSGQGPS(ph)STGQPGR ddPTM_A459_MK2206_30min_R1 1 TGSGQGPSSTGQPGR 15 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 T(0.009)GS(0.064)GQGPS(0.609)S(0.159)T(0.159)GQPGR 99.069 0.0084734 1018800 150.86 194.63 170.64 125.61 178.78 120.18 349.68 221.66 177.54 0 TRUE FALSE 138.0285648 181.9595516 159.0574322 135.284504 171.658814 126.9844877 326.3534852 219.72205 195.9959183 0 0 TGSGQGPS(ph)STGQPGR ddPTM_A459_MK2206_30min_R2 1 TGSGQGPSSTGQPGR 15 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 T(0.004)GS(0.008)GQGPS(0.727)S(0.221)T(0.039)GQPGR 99.813 0.012458 0 3967.9 4382.5 4518.8 4359.1 4591.8 6417.9 4834.4 3253.5 6486.8 5802.2 TRUE FALSE 4271.685475 4164.871423 4669.454537 4002.947586 4411.50286 6662.137682 4199.637473 3678.743621 7051.010139 5612.874689 0.761051281 0.742021095 0.831918544 0.713172449 0.785961402 1.18693861 0.748215078 0.655411678 1.256220837 1 12.45452414 -6.556380316 24.9994721 0.939827028 0.763597422 0.253748864 0.170317253 310.9764802 232054.2069 0.055973279 0.055973553 2.78E-07 6.556380316 -0.176229606 TGSGS(ph)PFAGNS(ph)PAR ddPTM_A459_MK2206_30min_R1 1 TGSGSPFAGNSPAR 14 0 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 T(0.012)GS(0.121)GS(0.867)PFAGNS(1)PAR 147.53 0.0086758 23692000 4368.4 4997.6 4553.2 3169.1 4011.9 3394 3980.3 3219 3931.6 4062.7 TRUE FALSE 3996.844641 4672.255332 4244.14147 3413.184631 3852.097528 3586.165347 3714.781449 3190.856622 4340.303889 4566.017948 0.875345802 1.023266966 0.929506086 0.747518882 0.84364485 0.785403252 0.813571364 0.698827 0.950566542 1 12.15672082 -5.622054632 6.814902635 0.819517225 0.955743675 0.220677751 0.090753389 0.243888523 14.35069023 0.022977553 0.040055899 2.39E-06 5.622054632 0.13622645 TGSGS(ph)PFAGNS(ph)PAR ddPTM_A459_MK2206_30min_R2 4 TGSGSPFAGNSPAR 14 0 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 T(0.008)GS(0.067)GS(0.925)PFAGNS(1)PAR;T(0.031)GS(0.133)GS(0.837)PFAGNS(1)PAR;TGS(0.001)GS(0.999)PFAGNS(1)PAR;T(0.003)GS(0.029)GS(0.967)PFAGNS(1)PAR 139.08 0.010437 168907000 494929 452070 435214 491735 413060 373312 444740 349140 278621 404723 TRUE FALSE 532821.1448 429620.8612 449723.8175 451558.6775 396841.1889 387518.6498 386345.1038 394773.7968 302854.9509 391516.9217 1.360914728 1.097323864 1.148670192 1.153356733 1.013599073 0.989787742 0.986790308 1.008318606 0.77354243 1 18.57871514 -3.564009328 0.315689792 0.910930794 2.053560914 0.70213746 0.078869349 8.941433797 0.394749215 0.078373792 4.536413984 0.000272892 3.564009328 1.142630121 TGSGS(ph)PFAGNSPAR ddPTM_A459_MK2206_30min_R2 2 TGSGSPFAGNSPAR 14 0 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 T(0.001)GS(0.001)GS(0.992)PFAGNS(0.007)PAR;T(0.005)GS(0.054)GS(0.941)PFAGNS(0.001)PAR 164.66 0.00025893 102709000 78720 88993 73411 89158 84316 72982 88880 67631 60165 64546 TRUE FALSE 84746.86373 84573.73703 75858.4861 81873.5062 81005.33019 75759.38115 77209.94924 76470.60391 65398.04295 62439.86931 1.357255623 1.354482928 1.214904627 1.311237629 1.297333436 1.21331742 1.23654886 1.224707943 1.047376359 1 15.9301799 -8.15692078 0.563370501 0.985849091 1.316922432 0.826991397 0.047327722 0.323916743 0.246108483 0.049242192 0.025334023 6.97E-09 8.15692078 0.331073341 TGSGSPFAGNS(ph)PAR ddPTM_A459_MK2206_30min_R1 6 TGSGSPFAGNSPAR 14 0 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 T(0.1)GS(0.207)GS(0.335)PFAGNS(0.358)PAR;TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR 226.06 4.45E-13 155408000 12395.6 12605.4 13597.5 11822.93 12258.6 12427.2 16738.3 16241.7 18555.5 19385.3 TRUE FALSE 11341.28913 11784.78617 12674.53958 12733.53412 11770.314 13130.81732 15621.71855 16099.70053 20484.41063 21786.89732 0.520555496 0.540911631 0.581750554 0.584458353 0.540247371 0.602693313 0.717023554 0.738962519 0.940216972 1 14.41117314 -7.962655981 0.894863143 1.009347602 0.550649734 0.965850576 0.030020418 0.091500882 0.138885888 0.027723136 0.010913788 1.09E-08 7.962655981 -0.458697868 TGSGSPFAGNS(ph)PAR ddPTM_A459_MK2206_30min_R2 4 TGSGSPFAGNSPAR 14 0 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 TGSGSPFAGNS(1)PAR;T(0.004)GS(0.001)GS(0.354)PFAGNS(0.641)PAR;TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR 180.56 7.39E-05 166957400 78617 115548 93073 112224 104103 116146 162738 128440 123188 163867 TRUE FALSE 84635.97797 109810.0543 96176.00737 103054.9402 100015.3931 120566.0174 141370.3051 145227.549 133902.6696 158520.0332 0.533913451 0.692720359 0.606712006 0.650106729 0.630932199 0.760572749 0.891813497 0.916146345 0.844705031 1 17.27430565 -7.037734817 1.905228978 0.913404493 0.623521267 0.876686008 0.051356226 0.110613138 0.802337865 0.022408005 0.016781425 9.17E-08 7.037734817 -0.289883226 TGSGSPFAGNS(ph)PAREGEQDAASLK ddPTM_A459_MK2206_30min_R1 1 TGSGSPFAGNSPAREGEQDAASLK 24 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 T(0.003)GS(0.007)GS(0.047)PFAGNS(0.724)PAREGEQDAAS(0.219)LK 44.878 0.040564 9647200 1277 1239.8 1486.6 1277.9 1342.3 1773.2 1841 2648.8 1868.7 1469.1 TRUE FALSE 1168.384444 1159.088795 1385.693734 1376.324079 1288.833349 1873.597052 1718.190249 2625.641821 2062.958052 1651.103199 0.707638653 0.70200869 0.839253255 0.833578471 0.780589214 1.134754661 1.040631652 1.590234833 1.249442223 1 10.68921458 -6.963869856 1.459614865 1.292435625 0.760172448 0.648586954 0.157385472 0.231470575 1.007394241 0.077008151 0.058677359 1.09E-07 6.963869856 -0.532263177 TGSNIS(ph)GASSDISLDEQYK ddPTM_A459_MK2206_30min_R1 4 TGSNISGASSDISLDEQYK 19 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 T(0.001)GSNIS(0.669)GAS(0.329)S(0.001)DISLDEQYK;T(0.079)GS(0.079)NIS(0.842)GASSDISLDEQYK;TGSNIS(1)GASSDISLDEQYK;TGS(0.001)NIS(0.55)GAS(0.093)S(0.009)DIS(0.348)LDEQYK 327.62 1.84E-154 22332800 4823.45 6491.06 5752.73 4859.38 3812.91 3998.19 4551.83 4109.64 5940.37 5577.35 TRUE FALSE 4413.190249 6068.490814 5362.250716 5233.65029 3661.033721 4224.564063 4248.185726 4073.709851 6557.892719 6268.314225 0.704047387 0.968121667 0.8554534 0.834937449 0.584053956 0.673955375 0.677723798 0.649889221 1.046197189 1 12.61386179 -8.271298078 24.62910207 1.023098668 0.747959747 0.515313324 0.108387893 572.3878814 1429925.53 0.111370492 0.030214348 5.35E-09 8.271298078 -0.275138922 TGSNIS(ph)GASSDISLDEQYK ddPTM_A459_MK2206_30min_R2 2 TGSNISGASSDISLDEQYK 19 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 T(0.004)GS(0.004)NIS(0.556)GAS(0.223)S(0.084)DIS(0.129)LDEQYK;T(0.008)GS(0.063)NIS(0.928)GASSDISLDEQYK 220.89 2.66E-19 19346200 71076 65108 70139 61722 61336 42614 67228 58878 42753 68346 TRUE FALSE 76517.63321 61874.8314 72477.39925 56679.11516 58927.64045 44235.70563 58400.88284 66573.55676 46471.57866 66115.87562 1.157326172 0.935854374 1.096217793 0.857269372 0.891278228 0.669063296 0.88331104 1.006922409 0.702880787 1 16.01270911 -5.770428585 24.88611569 0.853447897 1.050404939 0.399950496 0.114319917 178.0784046 493001.0025 0.031291172 0.047191801 1.70E-06 5.770428585 0.196957042 TGSNISGAS(ph)SDISLDEQYK ddPTM_A459_MK2206_30min_R1 1 TGSNISGASSDISLDEQYK 19 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 TGSNIS(0.135)GAS(0.862)S(0.001)DIS(0.001)LDEQYK 269.99 1.16E-58 6122000 2569.8 2458.4 2500.5 2280.8 1702.1 1973 1915.7 1873 2784.5 2179.1 TRUE FALSE 2351.225015 2298.357713 2330.773027 2456.467611 1634.301753 2084.709555 1787.907148 1856.624558 3073.958739 2449.063359 0.960050709 0.938463966 0.951699766 1.003023299 0.667317057 0.851227285 0.730037115 0.758095764 1.255156886 1 11.25801438 -11.06194462 2.590922544 1.007052643 0.889561162 0.02852593 0.158539691 32110609.92 30381529.01 1580179.543 0.040292809 8.67E-12 11.06194462 -0.11749148 TGSPGDAPERPPLCDFSEGLS(ph)APMDFYR ddPTM_A459_MK2206_30min_R1 1 TGSPGDAPERPPLCDFSEGLSAPMDFYR 28 1 Q8IWE5;Q5VVD7;A0A2R8Y575 Q8IWE5 PLEKHM2 Pleckstrin homology domain-containing family M member 2 1 T(0.143)GS(0.367)PGDAPERPPLCDFS(0.037)EGLS(0.451)APMDFY(0.002)R 41.423 0.044972 8077300 422.78 531.14 568.99 549.78 471.23 401.36 450.92 380.06 304.91 402.54 TRUE FALSE 386.8203409 496.5626895 530.3685441 592.1241509 452.4599113 424.0846564 420.8399496 376.7371755 336.6064856 452.4096942 0.85502222 1.097595157 1.172319141 1.308822862 1.000110999 0.937390736 0.930218682 0.832734533 0.744030223 1 8.821486033 -6.73493286 2.411630239 0.870686734 1.113925845 0.409614733 0.12303782 0.288195733 3.436864818 0.048999904 0.046052714 1.84E-07 6.73493286 0.243239111 TGSPGS(ph)PGAGGVQSTAK ddPTM_A459_MK2206_30min_R1 1 TGSPGSPGAGGVQSTAK 17 0 O43237-2;O43237;J3KRZ2;J3KRI4 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 T(0.003)GS(0.019)PGS(0.962)PGAGGVQS(0.011)T(0.004)AK 99.813 0.0046371 7704800 2410.9 1232.5 1215.3 1152.2 3935.7 4409 4962.9 2420.6 1426.1 1646 TRUE FALSE 2205.840295 1152.264026 1132.808822 1240.942644 3778.932735 4658.63377 4631.833996 2399.436949 1574.348198 1849.918907 1.192398373 0.622872723 0.612355935 0.670809212 2.042755886 2.518290803 2.503803804 1.297049801 0.851036331 1 10.85324631 -6.255894029 24.68789321 1.797897722 0.752181181 0.393244851 0.556591914 394.8836451 1758019.55 0.180117783 0.225792629 5.55E-07 6.255894029 -1.045716541 TGSPGS(ph)PGAGGVQSTAK ddPTM_A459_MK2206_30min_R2 3 TGSPGSPGAGGVQSTAK 17 0 O43237-2;O43237;J3KRZ2;J3KRI4 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 TGS(0.005)PGS(0.995)PGAGGVQSTAK;T(0.012)GS(0.001)PGS(0.987)PGAGGVQSTAK;T(0.079)GS(0.006)PGS(0.915)PGAGGVQSTAK 223.86 2.37E-12 56410600 189040 152060 142292 149730 149310 149585 155821 128797 118836 159452 TRUE FALSE 203513.0477 144508.9215 147035.9443 137496.58 143447.3392 155277.562 135361.5155 145631.2101 129172.1405 154249.0943 1.319379207 0.936854263 0.953237002 0.891393111 0.929972003 1.006667577 0.877551445 0.944130083 0.837425601 1 17.23490249 -4.761216054 6.901582616 0.928650636 1.328236796 0.848094342 0.049340364 0.038262664 10.10794227 0.011671998 0.071606554 1.73E-05 4.761216054 0.399586161 TGSPGSPGAGGVQS(ph)TAK ddPTM_A459_MK2206_30min_R1 1 TGSPGSPGAGGVQSTAK 17 0 O43237-2;O43237;J3KRZ2;J3KRI4 O43237-2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 TGSPGS(0.062)PGAGGVQS(0.714)T(0.223)AK 75.788 0.021711 9458200 3449 2688 2863.7 2339.2 4122.7 3616.7 4487.3 3156.8 3009 3107.5 TRUE FALSE 3155.644439 2513.010711 2669.320023 2519.365589 3958.484129 3821.474429 4187.960405 3129.20043 3321.796318 3492.48056 0.903553902 0.719548948 0.764304905 0.721368536 1.13343054 1.09420063 1.199136354 0.895982204 0.951128077 1 11.77003637 -6.257414977 24.99406706 1.050547632 0.7721559 0.657779133 0.094793193 221.6207909 1376403.011 0.030064656 0.037391174 5.53E-07 6.257414977 -0.278391733 TGSQGQCTQVR ddPTM_A459_MK2206_30min_R1 1 TGSQGQCTQVR 11 0 P62857 P62857 RPS28 40S ribosomal protein S28 0 127.51 0.040899 1448000 341.58 236.28 225.31 297.17 286.27 269.42 266.87 402.23 127.3 158.81 FALSE TRUE 312.5268273 220.8981291 210.0165849 320.0580849 274.8672597 284.6743276 249.0675892 398.7133455 140.5332905 178.4845818 1.751001819 1.237631435 1.176665138 1.793197383 1.540005624 1.594951927 1.395457169 2.233881166 0.787369358 1 7.479655643 -8.304104989 24.99902237 0.893683924 1.563543059 0.476882444 0.290779604 485.4081815 284410.7235 0.275400826 0.071110086 4.96E-09 8.304104989 0.669859134 TGSQGQCTQVR ddPTM_A459_MK2206_30min_R2 2 TGSQGQCTQVR 11 0 P62857 P62857 RPS28 40S ribosomal protein S28 0 ; 139.31 0.016335 4830800 4871.2 6109.9 3959.1 5780.3 6025.5 4406.2 6684.5 4675.9 3109.03 3525.2 FALSE TRUE 5244.142817 5806.491251 4091.094418 5308.031 5788.908594 4573.881029 5806.81712 5287.056185 3379.44781 3410.173013 1.537793771 1.702696968 1.199673566 1.556528358 1.697541026 1.341246034 1.702792527 1.550377698 0.990990134 1 11.73562922 -8.262107141 24.87093116 0.995494979 1.535547621 0.667012569 0.152781503 31.79020733 1183892.599 0.11969208 0.037942521 5.47E-09 8.262107141 0.540052642 TGSS(ph)GALGPPER ddPTM_A459_MK2206_30min_R1 1 TGSSGALGPPER 12 0 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 T(0.183)GS(0.341)S(0.476)GALGPPER 104.17 0.010019 19000000 1287.5 1180.1 1376.4 1487.5 1179.7 966.94 1200.5 1159.7 1454.3 1325.8 TRUE FALSE 1177.991364 1103.275276 1282.973803 1602.067508 1132.710051 1021.687307 1120.416835 1149.560865 1605.479689 1490.050113 0.790571642 0.740428302 0.861027285 1.075176931 0.760182521 0.685673118 0.751932318 0.771491412 1.077466909 1 10.54114514 -8.260827473 24.99779632 1.038733476 0.806129032 0.458215949 0.101841807 52.70822735 2153514.105 0.087042883 0.028316835 5.48E-09 8.260827473 -0.232604444 TGSS(ph)GALGPPER ddPTM_A459_MK2206_30min_R2 1 TGSSGALGPPER 12 0 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 T(0.14)GS(0.085)S(0.776)GALGPPER 104.17 0.010019 14925000 27925 28536 35391 17822 29472 25162 27285 27356 22782 28757 TRUE FALSE 30062.95947 27118.94374 36570.91828 16365.88559 28314.7812 26119.55754 23702.44672 30931.52313 24763.53718 27818.66145 1.080675989 0.974847183 1.314618187 0.588306005 1.017834063 0.938922155 0.852034048 1.111898327 0.890177165 1 14.76376538 -5.732611752 24.99997023 0.921591351 1.108526825 0.283239152 0.15164165 302.6262708 262442.1395 0.039771151 0.068870549 1.85E-06 5.732611752 0.186935475 TGSS(ph)SPPGGPPKPGSQLDSMLGSLQSDLNK ddPTM_A459_MK2206_30min_R1 1 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;P49023-4 A0A1B0GTU4 PXN Paxillin 1 T(0.036)GS(0.079)S(0.308)S(0.261)PPGGPPKPGS(0.308)QLDS(0.006)MLGS(0.001)LQSDLNK 85.595 1.29E-06 349010000 1756.3 1395.6 1629.5 1344.6 1501.4 1300.6 1528.2 1644 1522.3 1297.5 TRUE FALSE 1606.917462 1304.746186 1518.89408 1448.161325 1441.596059 1374.238848 1426.256566 1629.626681 1680.548533 1458.244096 1.10195369 0.89473785 1.041591106 0.993085677 0.988583505 0.942392877 0.978064352 1.117526679 1.152446657 1 10.51001652 -7.759417536 24.99950125 1.101240019 0.987754536 0.332714857 0.063173996 50.30480101 622030.6001 0.029460781 0.015913951 1.74E-08 7.759417536 -0.113485483 TGSS(ph)SPPGGPPKPGSQLDSMLGSLQSDLNK ddPTM_A459_MK2206_30min_R2 2 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;P49023-4 A0A1B0GTU4 PXN Paxillin 1 T(0.137)GS(0.137)S(0.361)S(0.361)PPGGPPKPGS(0.004)QLDSMLGSLQSDLNK;T(0.126)GS(0.126)S(0.369)S(0.369)PPGGPPKPGS(0.002)QLDS(0.005)MLGS(0.003)LQS(0.001)DLNK 60.516 0.0013682 53553000 72415 70341 74452 73003 75085 65367 87841 55504 60087 86653 TRUE FALSE 77959.14808 66847.96823 76934.19252 67038.42137 72136.78563 67854.58699 76307.37118 62758.56337 65313.25865 83825.51971 0.930016877 0.797465598 0.917789628 0.799737617 0.860558764 0.809474098 0.910311937 0.748680874 0.779157217 1 16.3551019 -4.742408725 24.53856032 0.841127508 0.930017249 0.099485588 0.072999817 2255.67696 2908329.846 0.01697049 0.586186369 1.81E-05 4.742408725 0.088889742 TGSSS(ph)PPGGPPKPGSQLDSMLGSLQSDLNK ddPTM_A459_MK2206_30min_R1 4 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;P49023-4 A0A1B0GTU4 PXN Paxillin 1 T(0.058)GS(0.07)S(0.321)S(0.468)PPGGPPKPGS(0.082)QLDSMLGSLQSDLNK;T(0.042)GS(0.048)S(0.175)S(0.659)PPGGPPKPGS(0.054)QLDS(0.019)MLGS(0.003)LQSDLNK;T(0.053)GS(0.06)S(0.173)S(0.517)PPGGPPKPGS(0.132)QLDS(0.058)MLGS(0.007)LQSDLNK;T(0.076)GS(0.076)S(0.336)S(0.444)PPGGPPKPGS(0.015)QLDS(0.048)MLGS(0.003)LQSDLNK 97.295 4.32E-08 470239000 8747.77 10334.05 10217.31 8776.05 7947.4 6731.45 7534.94 9008.67 7968.33 7820.24 TRUE FALSE 8003.726225 9661.301467 9523.787464 9451.982892 7630.838229 7112.578882 7032.297901 8929.908148 8796.666418 8789.070371 0.910645368 1.099240427 1.083594403 1.075424646 0.868219039 0.809252695 0.800118511 1.016024195 1.000864261 1 13.10149486 -6.258750334 24.87064966 0.905441573 1.049253531 0.33196527 0.086937453 254.1241924 2350362.572 0.027978579 0.034527002 5.51E-07 6.258750334 0.143811957 TGSSS(ph)PPGGPPKPGSQLDSMLGSLQSDLNK ddPTM_A459_MK2206_30min_R2 1 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;P49023-4 A0A1B0GTU4 PXN Paxillin 1 T(0.058)GS(0.051)S(0.175)S(0.713)PPGGPPKPGS(0.002)QLDSMLGSLQSDLNK 86.628 1.15E-06 22853000 61427 73743 65618 61985 64577 50056 72959 62582 51721 79420 TRUE FALSE 66129.89835 70081.02985 67805.67137 56920.62722 62041.38251 51960.91616 63379.39566 70761.68228 56219.59909 76828.5319 0.860746609 0.912174528 0.882558467 0.740878757 0.807530496 0.676323169 0.824946073 0.921033899 0.731754176 1 16.22935457 -10.84686481 14.72081363 0.9999999 0.818800412 0.336261007 0.076881962 5.37E-11 0 0.078124497 0.018947974 1.42E-11 10.84686481 -0.181199489 TGSSSPPGGPPKPGS(ph)QLDSMLGSLQSDLNK ddPTM_A459_MK2206_30min_R1 2 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;P49023-4 A0A1B0GTU4 PXN Paxillin 1 TGSS(0.001)S(0.001)PPGGPPKPGS(0.998)QLDSMLGSLQSDLNK;T(0.061)GS(0.061)S(0.169)S(0.28)PPGGPPKPGS(0.427)QLDS(0.001)MLGS(0.001)LQSDLNK 107.03 1.45E-10 79535000 4707.1 4828.2 4635.9 4614.3 3690.7 3088.3 3664.7 4112.6 4204.2 3676.3 TRUE FALSE 4306.736427 4513.883302 4321.228024 4969.694186 3543.691604 3263.156877 3420.23455 4076.643972 4641.241635 4131.747799 1.042352205 1.092487616 1.045859582 1.202806761 0.857673744 0.789776394 0.82779364 0.986663313 1.12331194 1 12.01253648 -6.271807328 24.98335501 0.91799452 1.092061837 0.394497493 0.099338089 753.0272795 1814545.938 0.033268699 0.038114963 5.35E-07 6.271807328 0.174067317 TGSSSPPGGPPKPGSQLDSMLGS(ph)LQSDLNK ddPTM_A459_MK2206_30min_R1 2 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;P49023-4 A0A1B0GTU4 PXN Paxillin 1 TGSSSPPGGPPKPGS(0.034)QLDS(0.165)MLGS(0.62)LQS(0.181)DLNK;TGSSSPPGGPPKPGS(0.019)QLDS(0.232)MLGS(0.707)LQS(0.042)DLNK 85.002 1.38E-06 17741100 2372.09 3492.5 3127.4 3301.4 2802.55 2606.9 2604 2927.85 2360.74 2372.72 TRUE FALSE 2170.331289 3265.137615 2915.120801 3555.6744 2690.918499 2754.500425 2430.291911 2902.252116 2606.147371 2666.670467 0.813873074 1.224424861 1.093168743 1.333376 1.009092999 1.032936187 0.911358168 1.088342993 0.977303871 1 11.38082384 -6.468201499 24.99960839 1.003974466 1.128411946 0.151404499 0.129871958 540.0923637 246941.6122 0.03910891 0.044345066 3.40E-07 6.468201499 0.124437479 TGST(ph)SSKEDDYESDAATIVQK ddPTM_A459_MK2206_30min_R1 2 TGSTSSKEDDYESDAATIVQK 21 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.031)GS(0.031)T(0.312)S(0.312)S(0.312)KEDDY(0.002)ESDAATIVQK;T(0.009)GS(0.156)T(0.593)S(0.12)S(0.12)KEDDY(0.001)ES(0.002)DAATIVQK 103.73 0.00024416 97778000 5141 6322 6735.6 5380.7 3136.9 2658.5 3467.2 3978.8 4865.5 3830.1 TRUE FALSE 4703.730954 5910.436651 6278.406238 5795.122446 3011.950631 2809.021973 3235.909414 3944.013771 5371.286136 4304.601704 1.092721529 1.373050762 1.458533604 1.346262174 0.699704836 0.652562575 0.751732596 0.916231987 1.24780096 1 12.07166404 -6.250605302 24.68478556 0.856231302 1.331663513 0.582691405 0.181552509 441.3690632 1005631.62 0.057523857 0.073497421 5.62E-07 6.250605302 0.475432211 TGSTS(ph)SKEDDYESDAATIVQK ddPTM_A459_MK2206_30min_R1 1 TGSTSSKEDDYESDAATIVQK 21 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.006)GS(0.046)T(0.171)S(0.643)S(0.131)KEDDY(0.003)ESDAATIVQK 95.365 0.00023029 9939700 2830.2 3114.2 3127.1 2687.4 1585.3 1314.8 1953.9 1905.6 2573.8 2229.5 TRUE FALSE 2589.476628 2911.465014 2914.841165 2894.384014 1522.154144 1389.24284 1823.558896 1888.93954 2841.35572 2505.707292 1.033431413 1.161933408 1.163280793 1.15511657 0.607474843 0.554431415 0.727762138 0.753854828 1.133953567 1 11.29100218 -6.247348923 24.75859506 0.768423939 1.133321518 0.487934274 0.165218558 582.7994647 1024046.98 0.050729913 0.065156557 5.66E-07 6.247348923 0.364897579 TGT(ph)PSDPR ddPTM_A459_MK2206_30min_R1 1 TGTPSDPR 8 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 T(0.066)GT(0.808)PS(0.125)DPR 112.11 0.026458 8110400 8831.3 11446 10332 8982.8 5670.3 5422.2 7338.5 7133.4 7927.2 10139 TRUE FALSE 8080.15156 10700.86332 9630.692627 9674.656812 5444.439944 5729.200278 6848.962055 7071.033436 8751.260808 11395.09587 0.709090266 0.9390762 0.845161176 0.849019344 0.47778799 0.502777716 0.601044707 0.620533036 0.767984834 1 13.47612544 -6.22986683 23.92076132 0.631737016 0.843662828 0.231001154 0.149272865 476.5379544 361045.5512 0.042788919 0.055233219 5.89E-07 6.22986683 0.211925812 TGT(ph)PSDPR ddPTM_A459_MK2206_30min_R2 1 TGTPSDPR 8 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 T(0.009)GT(0.679)PS(0.313)DPR 111.06 0.0275 28022000 496960 358130 397460 313140 260380 230910 413750 384830 292260 428460 TRUE FALSE 535007.6397 340345.785 410711.118 287555.4603 250156.1729 239697.4419 359424.128 435128.6023 317680.2465 414479.3853 1.290794328 0.82114044 0.990908433 0.69377506 0.6035431 0.578309683 0.867170095 1.049819648 0.766456084 1 18.66094082 -2.512728508 1.296351614 0.796627591 199.9948387 0.441512337 0.15694281 584.7357718 3.235263297 0.048738296 343985.8736 0.003070941 2.512728508 199.1982111 TGTGDIATCYS(ph)PR ddPTM_A459_MK2206_30min_R2 1 TGTGDIATCYSPR 13 0 Q9NZN5-2;E9PMR6;Q9NZN5 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 TGTGDIATCYS(1)PR 190.57 0.00016479 11082000 14897 17960 14609 18732 18837 16281 18569 13955 15250 13995 TRUE FALSE 16037.52577 17068.13252 15096.05677 17201.53568 18097.36473 16900.58486 16130.86799 15778.96641 16576.41743 13538.3443 1.184600231 1.260725251 1.115059304 1.270578979 1.336748744 1.248349465 1.191494886 1.165501931 1.224405073 1 13.72476369 -9.598957164 0.633932852 0.986535283 1.231573437 0.56628759 0.058540895 4.102906274 1.76410333 0.203843384 0.024411313 2.52E-10 9.598957164 0.245038154 TGTITTFEHAHNMR ddPTM_A459_MK2206_30min_R1 2 TGTITTFEHAHNMR 14 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 130.56 0.00051916 33425000 7716.7 8172.4 8839.9 7560.1 8912.5 8685.5 8565.1 8235.7 6429.7 5359.5 FALSE TRUE 7060.354143 7640.375275 8239.872217 8142.380212 8557.496252 9177.265504 7993.737807 8163.696143 7098.090324 6023.475322 1.172139631 1.268433067 1.36795982 1.351774478 1.420690846 1.52358315 1.327097295 1.355313288 1.178404483 1 12.55638039 -10.67294776 10.02428441 0.999999999 1.338560004 0.490570488 0.100346099 2.59E-09 1.53E-10 0.102937245 0.024965949 2.12E-11 10.67294776 0.338560004 TGTITTFEHAHNMR ddPTM_A459_MK2206_30min_R2 2 TGTITTFEHAHNMR 14 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 145.31 0.00029297 9066600 71111 95220 81389 96771 104800 100936 102828 80032 81301 79259 FALSE TRUE 76555.31284 90491.51326 84102.46864 88864.49974 100685.0254 104777.1902 89326.56008 90492.45719 88372.41402 76672.78532 0.998467872 1.180229894 1.096901179 1.159009672 1.313178137 1.36654994 1.165036065 1.180242205 1.152591674 1 16.22642697 -3.748257948 0.929493151 1.202931312 1.00E-08 0.215272308 0.098119809 17.66411307 2.80994556 0.033356399 33.6448842 0.000178543 3.748257948 -1.202931302 TGTIVVEGHELHDEDIR ddPTM_A459_MK2206_30min_R1 1 TGTIVVEGHELHDEDIR 17 0 J3KR24;A0A0A0MSX9;P41252 J3KR24 IARS "Isoleucine--tRNA ligase, cytoplasmic" 0 80.411 0.0093697 4642700 879.99 833.53 825.3 705.39 893.03 1214.4 1392.2 641.06 1082.3 615.65 FALSE TRUE 805.1422295 779.2670455 769.2809354 759.71926 857.4587241 1283.158279 1299.328878 635.45528 1194.808958 691.9213699 1.163632552 1.126236418 1.111803984 1.097984963 1.239243014 1.854485689 1.877856263 0.918392331 1.726798752 1 9.434464289 -6.538288717 24.56131213 1.501254338 1.129640075 0.23224829 0.301818316 275.3177227 438813.9551 0.098692376 0.098725423 2.90E-07 6.538288717 -0.371614263 TGTIVVEGHELHDEDIR ddPTM_A459_MK2206_30min_R2 1 TGTIVVEGHELHDEDIR 17 0 J3KR24;A0A0A0MSX9;P41252 J3KR24 IARS "Isoleucine--tRNA ligase, cytoplasmic" 0 84.046 0.0071082 5300100 25219 33121 30848 40350 34074 30484 32083 29072 28206 34707 FALSE TRUE 27149.78603 31476.2593 31876.45692 37053.27593 32736.08355 31644.08998 27870.46356 32871.81022 30659.3069 33574.51343 0.808642725 0.937504556 0.949424241 1.103613192 0.975027788 0.942503308 0.830107743 0.979070338 0.913172039 1 15.03507887 -1.52290858 0.005688011 1.827736307 5.41E-05 0.043296728 0.077710492 232938.3649 102.8467417 15186.97357 17968.13991 0.029997939 1.52290858 -1.827682177 TGTLQDLIQHGS(ph)PINNECHPSLER ddPTM_A459_MK2206_30min_R2 2 TGTLQDLIQHGSPINNECHPSLER 24 0 A0A2R8YH03;Q5VWN6 A0A2R8YH03 FAM208B Protein FAM208B 1 TGTLQDLIQHGS(0.999)PINNECHPSLER;TGTLQDLIQHGS(1)PINNECHPSLER 91.556 2.21E-05 11690000 31607.8 49854 39001 67499 58992 66457 63413 40633 52898 54049 TRUE FALSE 34027.71747 47378.32285 40301.27387 61984.11578 56675.67767 68986.0677 55086.79693 45943.87261 57498.97242 52285.38556 0.650807431 0.906148484 0.770794237 1.185496007 1.083967863 1.319413962 1.053579243 0.878713471 1.099714037 1 15.67412013 -5.752545923 24.97594853 1.091597014 0.788939793 0.578716943 0.122124602 145.8096211 409480.3558 0.034784684 0.05911852 1.77E-06 5.752545923 -0.302657221 TGVAVNKPAEFTVDAK ddPTM_A459_MK2206_30min_R2 1 TGVAVNKPAEFTVDAK 16 1 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 90.476 0.034766 5411900 26503 27759 33235 31927 30439 23786 35442 25258 25608 32889 FALSE TRUE 28532.09006 26380.52843 34343.03831 29318.46197 29243.81192 24691.1929 30788.42283 28559.30732 27835.33755 31815.83462 0.896788986 0.829163488 1.079432261 0.921505355 0.919159037 0.776066169 0.967707533 0.897644448 0.874889434 1 14.95745735 -11.15534958 2.77651192 1.008758641 0.908169071 0.117916639 0.076299025 56412251.8 55969465.2 3574071.278 0.019235926 6.99E-12 11.15534958 -0.10058957 TGVSPGDVS(ph)DSATSDSTK ddPTM_A459_MK2206_30min_R1 2 TGVSPGDVSDSATSDSTK 18 0 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 TGVSPGDVS(0.757)DS(0.232)AT(0.009)S(0.001)DSTK;TGVSPGDVS(0.998)DS(0.002)ATSDSTK 260.97 4.85E-95 4017700 2130.6 2422.2 2461.6 1924.61 2182.45 1743.53 2120.84 2189.04 2085.67 2441.7 TRUE FALSE 1949.381282 2264.51434 2294.51345 2072.843796 2095.518395 1842.247162 1979.362633 2169.901454 2302.48286 2744.19623 0.710365119 0.825201316 0.836133155 0.755355529 0.763618276 0.671324864 0.721290486 0.790723867 0.839037251 1 11.42216793 -8.652346388 1.748967929 0.999237334 0.758503342 0.708696437 0.047329423 0.32654922 2.066420365 0.050041201 0.014206496 2.23E-09 8.652346388 -0.240733992 TGVSPGDVS(ph)DSATSDSTK ddPTM_A459_MK2206_30min_R2 1 TGVSPGDVSDSATSDSTK 18 0 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 TGVSPGDVS(0.98)DS(0.02)ATSDSTK 200.45 7.67E-22 0 18906 18891 19021 21893 24423 19729 26845 19873 16084 22994 TRUE FALSE 20353.4579 17952.90041 19655.15065 20104.27187 23464.0303 20479.80092 23320.21925 22470.46933 17482.95725 22243.70766 0.915020922 0.807100178 0.883627448 0.903818382 1.054861476 0.920700867 1.04839623 1.010194419 0.785973162 1 14.44110966 -6.033090845 6.778828772 0.972832866 0.867091439 0.268700848 0.076414144 0.257049605 39.35879185 0.022082329 0.02946333 9.27E-07 6.033090845 -0.105741428 TGYES(ph)GEYEMLGEGLGVK ddPTM_A459_MK2206_30min_R1 4 TGYESGEYEMLGEGLGVK 18 0 Q13561;Q13561-3;Q13561-2;F8VW18;F8W1I6;H0YHL1;F8VX93;F8VRV7 Q13561 DCTN2 Dynactin subunit 2 1 T(0.001)GYES(0.999)GEYEMLGEGLGVK;T(0.001)GYES(0.999)GEYEMLGEGLGVK;T(0.007)GYES(0.993)GEYEMLGEGLGVK;T(0.002)GYES(0.998)GEYEMLGEGLGVK 222.51 1.34E-14 20195800 6597.8 6820.9 7038.8 5916.66 6905.98 5955.04 6176.6 6695.6 6445.3 5164.62 TRUE FALSE 6036.622464 6376.85817 6561.025867 6372.362178 6630.900193 6292.209219 5764.570284 6637.061075 7115.312 5804.452116 1.039998667 1.098615001 1.130343697 1.097840425 1.142381755 1.084031549 0.993129096 1.143443161 1.225836971 1 12.50294418 TGYES(ph)GEYEMLGEGLGVK ddPTM_A459_MK2206_30min_R2 2 TGYESGEYEMLGEGLGVK 18 0 Q13561;Q13561-3;Q13561-2;F8VW18;F8W1I6;H0YHL1;F8VX93;F8VRV7 Q13561 DCTN2 Dynactin subunit 2 1 TGYES(0.985)GEY(0.014)EMLGEGLGVK;T(0.001)GYES(0.999)GEYEMLGEGLGVK 128.64 0.00084472 0 11615.3 10783.4 9794.6 10518.4 10009 9456.1 11079.6 9484.9 10054.3 10449.9 TRUE FALSE 12504.5763 10247.91204 10121.14708 9659.013073 9615.996369 9815.958512 9624.835211 10724.609 10928.80484 10108.92062 1.23698432 1.013749383 1.001209472 0.955494007 0.951238686 0.971019447 0.952113047 1.060905452 1.081105021 1 13.30334134 -4.757707638 4.298469182 0.993897694 1.260890478 0.743152391 0.042135151 0.124413735 4.705416399 0.011698292 0.105127698 1.75E-05 4.757707638 0.266992784 THAPSALS(ph)PPR ddPTM_A459_MK2206_30min_R1 2 THAPSALSPPR 11 0 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 THAPS(0.003)ALS(0.997)PPR;THAPS(0.011)ALS(0.989)PPR 103.43 0.012081 4857100 4377.1 4308.3 4379.5 3246 4574.3 4246.6 3822.7 3600 3710.7 3544.5 TRUE FALSE 4004.80466 4027.828887 4082.231742 3496.007482 4392.095945 4487.038822 3567.694658 3568.52558 4096.440544 3983.61942 1.005318088 1.011097814 1.024754454 0.877595753 1.102539044 1.126372364 0.895591241 0.895799825 1.028321261 1 11.95986411 -7.294089297 24.9995174 0.946244745 1.020864583 0.17420229 0.07308724 1186.682411 908618.886 0.031836195 0.021465893 5.08E-08 7.294089297 0.074619838 THAPSALS(ph)PPR ddPTM_A459_MK2206_30min_R2 2 THAPSALSPPR 11 0 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 THAPS(0.266)ALS(0.734)PPR;THAPS(0.009)ALS(0.991)PPR 73.758 0.037581 15527600 15334.4 19441 17652.1 22974 19037.9 22456.5 20223.8 17636.6 19216.6 17703.3 TRUE FALSE 16508.41345 18475.58821 18240.6122 21096.95071 18290.37639 23311.09784 17568.39077 19941.76418 20888.02513 17125.64277 0.963958765 1.078825972 1.06510526 1.23189249 1.068011089 1.3611809 1.025852927 1.164438873 1.219692914 1 14.06387052 -4.884975781 1.198573234 1.158182218 0.907073543 0.22497542 0.103261338 1.79248049 2.494280256 0.03011276 0.53882126 1.30E-05 4.884975781 -0.251108676 THAVS(ph)VSETDDYAEIIDEEDTYTMPSTR ddPTM_A459_MK2206_30min_R1 1 THAVSVSETDDYAEIIDEEDTYTMPSTR 28 0 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;Q05397-4;Q05397-3;H0YB33;H0YB99 E7ESA6 PTK2 Focal adhesion kinase 1 1 T(0.002)HAVS(0.748)VS(0.197)ET(0.052)DDYAEIIDEEDTYTMPSTR 228.05 3.65E-49 14110000 2083.8 1966.3 2172.1 1330.6 1874.9 2067.4 1854 1780.6 1817.6 1682.3 TRUE FALSE 1906.561868 1838.293513 2024.663904 1433.083043 1800.218763 2184.454401 1730.323043 1765.032402 2006.546024 1890.716025 1.008380869 0.972273725 1.070845054 0.757957844 0.952135984 1.155358273 0.915168127 0.933525912 1.061262505 1 10.88471698 -6.572133861 24.99999691 1.00845175 0.948847286 0.087841428 0.097042738 320.6996209 162772.6048 0.032886721 0.03288673 2.68E-07 6.572133861 -0.059604464 THAVSVS(ph)ETDDYAEIIDEEDTYTMPSTR ddPTM_A459_MK2206_30min_R1 1 THAVSVSETDDYAEIIDEEDTYTMPSTR 28 0 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;Q05397-4;Q05397-3;H0YB33;H0YB99 E7ESA6 PTK2 Focal adhesion kinase 1 1 T(0.079)HAVS(0.355)VS(0.554)ET(0.012)DDYAEIIDEEDTYTMPSTR 131.5 1.92E-12 9960200 1135.7 1241.9 1297.1 932.82 861.69 777.97 1178.4 972.06 1163.6 840.29 TRUE FALSE 1039.102751 1161.052084 1209.056466 1004.665958 827.3670626 822.0179891 1099.791086 963.5613819 1284.560384 944.3914691 1.100288159 1.229418226 1.280249246 1.063823627 0.876084854 0.870420812 1.164550001 1.020298693 1.360199055 1 9.883241199 -5.864099588 6.900541782 1.040011708 1.205109327 0.200672512 0.138936427 0.343051853 20.16219263 0.040888051 0.061131925 1.37E-06 5.864099588 0.165097619 THAVSVSETDDY(ph)AEIIDEEDTYTMPSTR ddPTM_A459_MK2206_30min_R1 2 THAVSVSETDDYAEIIDEEDTYTMPSTR 28 0 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;Q05397-4;Q05397-3;H0YB33;H0YB99 E7ESA6 PTK2 Focal adhesion kinase 1 1 THAVSVSETDDY(1)AEIIDEEDTYTMPSTR;THAVSVSETDDY(1)AEIIDEEDTYTMPSTR 249.35 7.00E-62 9833100 952.46 1042.62 718.03 1134.94 1082.94 920.01 800.13 895.53 460.78 868.03 TRUE FALSE 871.4482754 974.7452485 669.2921241 1222.353275 1039.804207 972.1001711 746.7547876 887.7004756 508.6797299 975.5681097 0.893272614 0.999156531 0.686053713 1.252965593 1.06584481 0.996445211 0.765456333 0.90993183 0.521418981 1 9.930098788 -7.258621005 24.65515535 0.791696099 0.985692555 0.206723353 0.175382295 327.1545405 2861967.301 0.068505374 0.050640576 5.51E-08 7.258621005 0.193996456 THCAATPSSSEDTETVSNS(ph)SEGR ddPTM_A459_MK2206_30min_R1 2 THCAATPSSSEDTETVSNSSEGR 23 0 H0YEM7;O75143-4;O75143-3;O75143-2;O75143;O75143-5 H0YEM7 ATG13 Autophagy-related protein 13 1 THCAATPSSSEDTET(0.001)VS(0.019)NS(0.866)S(0.114)EGR;THCAATPSSSEDTETVS(0.011)NS(0.872)S(0.117)EGR 268.31 6.07E-66 12145700 1724.5 1512.99 1914.57 1427.29 2238 2154.5 1766.38 1402.56 1267.54 1470.4 TRUE FALSE 1577.822219 1414.494076 1784.614323 1537.220123 2148.855721 2276.485928 1648.548013 1390.297566 1399.305319 1652.564253 0.954772086 0.855938929 1.079906164 0.930202938 1.300315989 1.377547605 0.997569692 0.841297132 0.846747905 1 10.69049065 -7.527965061 17.57836058 0.89029592 1.084896885 0.225521108 0.155464293 6.00760896 20736.61799 0.080902523 0.047302864 2.97E-08 7.527965061 0.194600965 THCAATPSSSEDTETVSNS(ph)SEGR ddPTM_A459_MK2206_30min_R2 1 THCAATPSSSEDTETVSNSSEGR 23 0 H0YEM7;O75143-4;O75143-3;O75143-2;O75143;O75143-5 H0YEM7 ATG13 Autophagy-related protein 13 1 THCAATPSSSEDTET(0.009)VS(0.328)NS(0.557)S(0.105)EGR 159.5 8.65E-10 8604600 8696.3 11016 7968.7 13456 9442.8 12199 10685 8796 9954.7 12297 TRUE FALSE 9362.095414 10468.96146 8234.372481 12356.60176 9072.028226 12663.24149 9282.046665 9945.667401 10820.54181 11895.7499 0.78701179 0.880058975 0.692211298 1.038740883 0.762627687 1.064518135 0.780282601 0.836068973 0.909614098 1 13.5381586 THCVGDSQSSAS(ph)SPPATSK ddPTM_A459_MK2206_30min_R1 1 THCVGDSQSSASSPPATSK 19 0 Q9H4Z2-2;Q9H4Z2 Q9H4Z2-2 ZNF335 Zinc finger protein 335 1 THCVGDSQS(0.002)S(0.012)AS(0.493)S(0.493)PPATSK 115.66 0.00087813 0 588.76 491.49 663.99 438.94 690.94 691.43 676.76 452.43 347.42 484.43 TRUE FALSE 538.6828703 459.4939117 618.9202088 472.7472349 663.4183967 730.5781691 631.6145752 448.4744522 383.5355523 544.4448457 0.989416788 0.843967787 1.136791382 0.868310608 1.218522688 1.341877281 1.160107549 0.823727979 0.704452536 1 9.088642096 -7.772755283 24.86543475 0.823067542 1.080248149 0.317347705 0.15859245 257.5644329 565959.6272 0.092405091 0.045022778 1.69E-08 7.772755283 0.257180607 THCVGDSQSSASS(ph)PPATSK ddPTM_A459_MK2206_30min_R1 2 THCVGDSQSSASSPPATSK 19 0 Q9H4Z2-2;Q9H4Z2 Q9H4Z2-2 ZNF335 Zinc finger protein 335 1 THCVGDSQSSAS(0.006)S(0.993)PPATSK;THCVGDSQSS(0.001)AS(0.173)S(0.826)PPATSK 186.6 1.61E-15 8080100 6930.2 4567.4 6108.4 4477.9 7336.2 6948.4 7371.4 6542.5 4945.4 4460.7 TRUE FALSE 6340.750098 4270.06143 5693.778827 4822.788634 7043.983619 7341.812403 6879.667356 6485.299612 5459.492027 5013.325193 1.264779334 0.85174236 1.135729004 0.961993976 1.405052206 1.464459639 1.372276302 1.293612396 1.088996189 1 12.2915521 -6.258454037 24.98008225 1.300176928 1.045014667 0.278720432 0.166944538 296.2752954 2479102.595 0.049221034 0.060775885 5.52E-07 6.258454037 -0.25516226 THCVGDSQSSASS(ph)PPATSK ddPTM_A459_MK2206_30min_R2 2 THCVGDSQSSASSPPATSK 19 0 Q9H4Z2-2;Q9H4Z2 Q9H4Z2-2 ZNF335 Zinc finger protein 335 1 THCVGDSQSSAS(0.156)S(0.843)PPATSK;THCVGDSQSSAS(0.009)S(0.991)PPATSK 170.32 2.46E-09 6639600 44803.1 77867 50516.2 83784 82651 79449 87932 66426 51579 79403 TRUE FALSE 48233.25978 74000.23801 52200.3849 76938.57919 79405.70645 82472.48737 76386.42277 75108.10627 56065.24819 76812.08661 0.627938413 0.963393149 0.67958556 1.00164678 1.033765778 1.073691537 0.994458374 0.977816247 0.729901382 1 16.22904572 -4.033868982 0.746572117 0.970077555 6.82E-14 0.352237502 0.124228994 8.806347723 1.664451343 0.048580921 9.283606314 9.25E-05 4.033868982 -0.970077555 THDHQLESSLS(ph)PVEVFAK ddPTM_A459_MK2206_30min_R1 2 THDHQLESSLSPVEVFAK 18 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 T(0.001)HDHQLES(0.04)S(0.166)LS(0.793)PVEVFAK;THDHQLESS(0.001)LS(0.998)PVEVFAK 76.051 0.0077792 8478700 5280.1 4199.6 5340.3 4340.6 5630.6 5247.1 5130.2 4689 3957.1 3651.4 TRUE FALSE 4830.999768 3926.205277 4977.815315 4674.913764 5406.321279 5544.186268 4787.973719 4648.004567 4368.454706 4103.762999 1.177212176 0.956732949 1.21298801 1.139177327 1.317405825 1.351000599 1.16672764 1.132620127 1.064499755 1 12.0027317 -8.264294676 1.832315719 1.006120816 1.189061184 0.285471213 0.100359937 0.497917486 3.114817673 0.103708948 0.030653922 5.44E-09 8.264294676 0.182940368 THDHQLESSLS(ph)PVEVFAK ddPTM_A459_MK2206_30min_R2 2 THDHQLESSLSPVEVFAK 18 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 THDHQLES(0.005)S(0.097)LS(0.898)PVEVFAK;THDHQLES(0.001)S(0.003)LS(0.996)PVEVFAK 96.881 0.0024148 7351500 43510 63936 42246 60235 58445 46270 61760 41706 44444 59764 TRUE FALSE 46841.15905 60761.03121 43654.46055 55313.60782 56150.15564 48030.83727 53650.83781 47157.1174 48309.65878 57813.90557 0.810205756 1.050976069 0.755085824 0.956752658 0.971222322 0.830783473 0.92799193 0.815670848 0.835606215 1 15.81912892 -6.779344685 24.99736108 0.873363785 0.910863499 0.016209478 0.092394463 990.2536464 1382470.141 0.030934911 0.027337926 1.66E-07 6.779344685 0.037499714 THEAQIQEMR ddPTM_A459_MK2206_30min_R1 2 THEAQIQEMR 10 0 P35579 P35579 MYH9 Myosin-9 0 ; 163.9 0.00054015 20910900 3337.5 2859.3 3120.9 2926.02 4144.4 3238.04 3618.6 2865.55 2609.31 2138.73 FALSE TRUE 3053.628099 2673.15905 2909.062003 3151.382567 3979.319772 3421.375027 3377.209797 2840.496798 2880.557112 2403.692019 1.270390747 1.112105473 1.210247395 1.311059213 1.655503176 1.423383279 1.405009365 1.18172244 1.198388599 1 11.23103634 -8.404436577 1.466735568 1.012858177 1.337229327 0.347071918 0.141329584 0.504909367 2.299109215 0.152750891 0.045899483 3.94E-09 8.404436577 0.324371151 THEAQIQEMR ddPTM_A459_MK2206_30min_R2 2 THEAQIQEMR 10 0 P35579 P35579 MYH9 Myosin-9 0 ; 143.5 0.0015216 24591000 62112 73341 58276 79256 81131 69373 76186 59466 57200 67447 FALSE TRUE 66867.34248 69698.99259 60218.89275 72780.53127 77945.38929 72013.03813 66182.68668 67238.41038 62175.15261 65246.20991 1.024846387 1.068245844 0.922948518 1.115475234 1.194634744 1.103712204 1.014352968 1.030533581 0.952931254 1 15.99360648 -7.689666551 2.126929056 0.985664161 1.070838418 0.2132683 0.06769451 0.573913347 5.157475746 0.048976433 0.021919631 2.04E-08 7.689666551 0.085174257 THEDIEAQIR ddPTM_A459_MK2206_30min_R2 1 THEDIEAQIR 10 0 O75533;B4DGZ4;A0A494C1M2;O75533-2;F8WC19 O75533 SF3B1 Splicing factor 3B subunit 1 0 98.04 0.030576 0 4887 9200.9 7782.4 13994 8121 16003 9799.9 6556.8 10208 5697.8 FALSE TRUE 5261.152477 8743.996685 8041.861332 12850.64544 7802.128735 16612.00538 8513.161358 7413.796273 11095.87339 5511.881253 0.954511216 1.586390614 1.459004823 2.331444537 1.415511035 3.013854003 1.544511024 1.345057329 2.013082808 1 12.42832909 -3.283560791 12.5391023 1.713496544 1.478117366 0 0.598472898 0 0 0.133891545 0 0.000520522 3.283560791 -0.235379177 THHNDTELIR ddPTM_A459_MK2206_30min_R1 1 THHNDTELIR 10 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 0 101.66 0.022643 2304200 769.71 614.44 626.22 580.36 1631.6 1955.9 1805.6 1721.4 590.96 585.13 FALSE TRUE 704.2421226 574.4398443 583.7139311 625.0594278 1566.609917 2066.641368 1685.151719 1706.349981 652.3924068 657.6203219 1.070894708 0.873512915 0.887615409 0.950486788 2.382240732 3.142605693 2.562499458 2.594734263 0.992050253 1 9.361111072 -6.257856445 23.81804412 2.266111566 0.936332554 0.424955361 0.65026644 140.2351324 932228.4252 0.195112159 0.241683901 5.52E-07 6.257856445 -1.329779012 THMQDLK ddPTM_A459_MK2206_30min_R1 1 THMQDLK 7 0 E7EPK1;G3V1Q4;Q16181;Q16181-2;E7ES33;J3KSZ7;J3QRT6;A0A5F9ZHH3;O43236-5;O43236-2;O43236-3;O43236;O43236-4 E7EPK1 SEPT7;SEPT4 Septin-7;Septin-4 0 104.37 0.025099 0 5111.1 4866.3 4085.1 4820.2 2815.9 3056.9 4688.2 5029.5 537.41 3627.9 FALSE TRUE 4676.374106 4549.502986 3807.814794 5191.452639 2703.73674 3229.979036 4375.458732 4985.527612 593.2756926 4077.351641 1.146914595 1.115798534 0.933894137 1.273241333 0.663111004 0.792175736 1.073112922 1.22273673 0.145505157 1 11.99341667 -6.260551851 24.99998519 0.838897504 1.104231316 0.210830373 0.283117475 149.4822863 4210622.219 0.084423519 0.102742753 5.49E-07 6.260551851 0.265333812 THNDIIHNENMR ddPTM_A459_MK2206_30min_R1 4 THNDIIHNENMR 12 0 P15311;E7EQR4 P15311 EZR Ezrin 0 ;;; 202 3.97E-05 137203000 5935.1 7250.9 7382.37 6227.59 6199.1 5284.67 6496.3 6074.8 5670.69 5741.49 FALSE TRUE 5430.288579 6778.865092 6881.275293 6707.240061 5952.17672 5583.883448 6062.94368 6021.688664 6260.178518 6452.789127 0.841541304 1.050532562 1.066403249 1.039432706 0.922419221 0.86534417 0.93958497 0.933191608 0.970150798 1 12.65570716 -6.272384923 24.01197099 0.931509647 1.007904662 0.15788191 0.066800167 656.5112594 1440229.882 0.020948882 0.02399715 5.34E-07 6.272384923 0.076395015 THNDIIHNENMR ddPTM_A459_MK2206_30min_R2 5 THNDIIHNENMR 12 0 P15311;E7EQR4 P15311 EZR Ezrin 0 ;;;; 184.87 5.89E-05 51622300 67771.9 103679.3 65266.4 109378.5 98206.7 98247.4 94597.7 71451 68014.4 115319.9 FALSE TRUE 72960.56877 98530.73673 67442.3492 100441.9267 94350.61151 101986.2737 82176.90836 80789.89103 73930.16957 111557.0211 0.654020411 0.883232053 0.604554949 0.900364008 0.845761303 0.914207574 0.736635915 0.724202656 0.662711937 1 16.76742179 -11.70586546 2.415840905 1.619757201 0.776059732 0.296949316 0.105961881 8505225.567 2436045.285 28726260.26 0.026647675 1.97E-12 11.70586546 -0.843697469 THPYS(ph)PK ddPTM_A459_MK2206_30min_R1 3 THPYSPK 7 0 Q15853-3;M0QZ39;M0R1C6;H0YD59;E9PME6;M0QXT0;B1AQP1;B4DLJ1;Q15853-4;P22415-2;P22415;Q15853-2;Q15853 Q15853-3 USF2;USF1 Upstream stimulatory factor 2;Upstream stimulatory factor 1 1 T(0.053)HPYS(0.947)PK;T(0.195)HPY(0.001)S(0.804)PK;T(0.046)HPY(0.001)S(0.953)PK 85.862 0.035661 30886200 20164.9 19561.6 17148.9 19773.5 8031.5 9514.5 14860.3 18205.2 2812.36 12396.1 TRUE FALSE 18449.76936 18288.13628 15984.88045 21296.4584 7711.588348 10053.20277 13868.9965 18046.03386 3104.714886 13931.82245 1.324289728 1.312688009 1.14736464 1.52861971 0.553523301 0.721599977 0.995490471 1.295310353 0.222850592 1 13.76609637 -6.257848722 24.99965263 0.818936243 1.314209923 0.456162275 0.282849291 313.3910041 2181956.954 0.083901182 0.104064593 5.52E-07 6.257848722 0.49527368 THS(ph)AGTSPTITHQK ddPTM_A459_MK2206_30min_R1 1 THSAGTSPTITHQK 14 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 T(0.029)HS(0.727)AGT(0.122)S(0.122)PTITHQK 91.789 0.010935 8883000 3465.8 3247 3345.3 2881.8 3630.6 3420.9 4061.8 3716.1 2766.2 3350.5 TRUE FALSE 3171.01551 3035.61971 3118.230357 3103.756735 3485.985514 3614.588402 3790.844733 3683.610529 3053.756389 3765.585235 0.842104298 0.806148187 0.828086516 0.824242858 0.925748668 0.959900832 1.006707987 0.978230554 0.810964617 1 11.87865839 -6.331281324 3.333597194 0.952613493 0.822754756 0.574243177 0.051676992 0.185112018 4.04603014 0.016846753 0.019867295 4.66E-07 6.331281324 -0.129858737 THS(ph)DASDDEAFTTSK ddPTM_A459_MK2206_30min_R1 1 THSDASDDEAFTTSK 15 0 Q13017-2;Q13017;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 THS(0.957)DAS(0.043)DDEAFTTSK 241.41 3.41E-20 4782500 856.75 902.95 1031 791.09 831.95 840.33 808.9 1046.2 706.37 894.12 TRUE FALSE 783.8789135 844.1677909 961.0185925 852.0198889 798.8116698 887.9087584 754.9397569 1037.053184 779.7996893 1004.890336 0.780064138 0.840059617 0.95634176 0.847873503 0.794924223 0.883587718 0.751265815 1.032006326 0.776004765 1 9.972822353 -14.52287873 0.254611897 1.901498819 0.84357728 0.219002463 0.083224676 291.6446148 2.875539974 137.0979656 0.11066334 3.00E-15 14.52287873 -1.057921539 THS(ph)DASDDEAFTTSK ddPTM_A459_MK2206_30min_R2 1 THSDASDDEAFTTSK 15 0 Q13017-2;Q13017;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 T(0.223)HS(0.721)DAS(0.056)DDEAFTTSK 89.502 0.017956 0 24180 30711 23136 30634 32331 21842 27800 24860 26647 28067 TRUE FALSE 26031.23939 29185.9364 23907.34269 28131.10421 31061.52249 22673.21262 24149.82661 28109.28736 28964.70789 27151.17609 0.958751816 1.074941885 0.880526966 1.036091553 1.144021253 0.835072946 0.889457846 1.035288021 1.066793858 1 14.72872707 -7.953395778 24.99918742 1.039279403 0.976856866 0.084147854 0.0898453 313.4627846 168145.6595 0.050971598 0.024485955 1.11E-08 7.953395778 -0.062422537 THS(ph)EGSLLQEPR ddPTM_A459_MK2206_30min_R1 1 THSEGSLLQEPR 12 0 P49796-1;P49796-4;P49796-6;P49796;C9J582 P49796-1 RGS3 Regulator of G-protein signaling 3 1 T(0.158)HS(0.842)EGSLLQEPR 123.1 0.0022362 3460400 1702.1 1230.2 1852.6 1076.1 1882.8 1699.9 1973.3 1665.8 1737.2 1901.2 TRUE FALSE 1557.327457 1150.113756 1726.850674 1158.981408 1807.804089 1796.146869 1841.664757 1651.236086 1917.788157 2136.735009 0.728835092 0.538257552 0.808172593 0.542407647 0.846059095 0.840603473 0.861906015 0.772784683 0.897532052 1 11.06119229 -6.342751602 8.332071915 0.857253862 0.657322299 0.565658134 0.092072892 0.252534875 23.81073963 0.026520003 0.03008003 4.54E-07 6.342751602 -0.199931564 THS(ph)EGSLLQEPR ddPTM_A459_MK2206_30min_R2 1 THSEGSLLQEPR 12 0 P49796-1;P49796-4;P49796-6;P49796;C9J582 P49796-1 RGS3 Regulator of G-protein signaling 3 1 T(0.238)HS(0.757)EGS(0.005)LLQEPR 94.487 0.012509 5456400 14065 20234 19087 24713 20983 28261 20622 15529 21127 22008 TRUE FALSE 15141.82721 19229.20898 19723.35105 22693.86885 20159.10199 29336.49216 17914.30663 17558.69362 22964.58827 21289.88076 0.711221795 0.903208862 0.926419047 1.065946263 0.946886561 1.377954742 0.841447016 0.824743634 1.078662137 1 14.37788025 -4.639180891 1.228559066 1.014396688 0.502234251 0.286327147 0.146266334 2.73782058 2.849507525 0.045353696 1.940683125 2.30E-05 4.639180891 -0.512162437 THS(ph)FENVSCHLPDSR ddPTM_A459_MK2206_30min_R1 1 THSFENVSCHLPDSR 15 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 T(0.222)HS(0.778)FENVSCHLPDSR 154.56 0.00012296 14328000 1749.8 1298.8 1350.1 1063.7 2111.7 2054.8 1760.9 1698.6 1203.4 1006.1 TRUE FALSE 1600.970321 1214.247884 1258.458974 1145.626358 2027.586517 2171.141 1643.433574 1683.749319 1328.497736 1130.743264 1.415856608 1.073849319 1.11294846 1.013162223 1.793144901 1.92010076 1.453410006 1.489064205 1.174888924 1 10.14305569 -6.247319086 24.95047463 1.517720078 1.145303394 0.240369356 0.269277964 1016.076085 1795399.893 0.08144398 0.104615426 5.66E-07 6.247319086 -0.372416684 THS(ph)FENVSCHLPDSR ddPTM_A459_MK2206_30min_R2 2 THSFENVSCHLPDSR 15 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 T(0.008)HS(0.992)FENVSCHLPDSR;T(0.001)HS(0.999)FENVSCHLPDSR 185.2 1.41E-05 51475000 23755.7 74908 29349.4 79701 68467 82305 67466 57342 63507 45113 TRUE FALSE 25574.45466 71188.17765 30327.89435 73189.17335 65778.64156 85437.17445 58607.63316 64836.79628 69030.72407 43640.9665 0.586019438 1.631223672 0.694940941 1.677074987 1.507268212 1.957728742 1.342949936 1.485686534 1.581787242 1 15.41339543 -4.753877059 24.97463114 1.446925952 0.586017887 0.358184792 0.338706415 298.3784336 985315.0227 0.083051623 0.855683048 1.76E-05 4.753877059 -0.860908064 THS(ph)QGGYGSQGYK ddPTM_A459_MK2206_30min_R1 2 THSQGGYGSQGYK 13 0 K7ERS0;K7EPH2;K7ER00;Q9Y285-2;Q9Y285 K7ERS0 FARSA Phenylalanine--tRNA ligase alpha subunit 1 T(0.286)HS(0.713)QGGYGS(0.001)QGYK;T(0.106)HS(0.894)QGGYGSQGYK 122.19 0.0017831 13165800 11184.4 9860 11423.5 9295.3 9984.5 9513.4 10889.6 10547.5 7630 8600.8 TRUE FALSE 10233.10805 9218.112208 10648.10465 10011.22562 9586.796222 10052.04049 10163.17465 10455.28432 8423.165804 9666.332037 1.058634031 0.953630826 1.1015662 1.035679881 0.991771872 1.039902255 1.051399291 1.081618579 0.871392145 1 13.23875284 -8.25453818 24.99916438 0.93569607 1.037218638 0.415466897 0.049095387 452.2394055 1638223.97 0.033138682 0.011932921 5.56E-09 8.25453818 0.101522568 THS(ph)QGGYGSQGYK ddPTM_A459_MK2206_30min_R2 1 THSQGGYGSQGYK 13 0 K7ERS0;K7EPH2;K7ER00;Q9Y285-2;Q9Y285 K7ERS0 FARSA Phenylalanine--tRNA ligase alpha subunit 1 T(0.489)HS(0.511)QGGYGSQGYK 100.27 0.0073219 12200000 23981 29594 17473 33128 33398 25515 31548 24878 22053 24739 TRUE FALSE 25817.0038 28124.40499 18055.5411 30421.33643 32086.62671 26485.9912 27405.7097 28129.64002 23971.13008 23931.76846 1.07877543 1.175191254 0.754459125 1.271169596 1.340754519 1.106729377 1.14516024 1.175410002 1.001644744 1 14.54663939 -4.453550825 14.48544504 1.116447836 0.698722222 0.000385351 0.154878715 2844674.044 15185445.19 0.039275213 35141737.97 3.52E-05 4.453550825 -0.417725614 THS(ph)TSSSLGSGESPFSR ddPTM_A459_MK2206_30min_R1 2 THSTSSSLGSGESPFSR 17 0 F8WBF9;Q5TH30;Q9UGV2-3;Q9UGV2-2;Q9UGV2 F8WBF9 NDRG3 Protein NDRG3 1 T(0.001)HS(0.984)T(0.015)SSSLGSGESPFSR;T(0.206)HS(0.38)T(0.38)S(0.033)SSLGSGESPFSR 246.75 1.05E-78 8527300 1610.23 960.1 1200.89 828.54 1916.17 1656.02 1759.07 1546.26 802 903.73 TRUE FALSE 1473.271483 897.5973155 1119.376933 892.3542944 1839.844891 1749.782421 1641.72565 1532.741212 885.37077 1015.690895 1.450511656 0.883730788 1.102084244 0.878568764 1.811422058 1.722750917 1.61636346 1.509062668 0.871693125 1 9.988245699 -6.24775368 24.89413933 1.4721027 1.066464391 0.210500698 0.316381026 1038.543262 1889098.236 0.094184817 0.1209169 5.65E-07 6.24775368 -0.40563831 THS(ph)TSSSLGSGESPFSR ddPTM_A459_MK2206_30min_R2 1 THSTSSSLGSGESPFSR 17 0 F8WBF9;Q5TH30;Q9UGV2-3;Q9UGV2-2;Q9UGV2 F8WBF9 NDRG3 Protein NDRG3 1 T(0.001)HS(0.995)T(0.003)S(0.001)SSLGSGESPFSR 124.16 0.0013217 7437200 5405.1 15821 7309.5 18912 15086 20299 13753 10434 14262 10901 TRUE FALSE 5818.918612 15035.35215 7553.195082 17366.8291 14493.64784 21071.49267 11947.21458 11797.75963 15502.48298 10545.30126 0.551802027 1.425786876 0.716261669 1.646878422 1.374417618 1.998187832 1.132941988 1.11876933 1.47008441 1 13.36431269 -5.761283164 24.99999991 1.410339814 0.950733862 0.298638459 0.343003928 5.49388017 878871.8293 0.093346874 0.149415976 1.73E-06 5.761283164 -0.459605952 THSDAS(ph)DDEAFTTSK ddPTM_A459_MK2206_30min_R1 1 THSDASDDEAFTTSK 15 0 Q13017-2;Q13017;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 THS(0.11)DAS(0.89)DDEAFTTSK 267.47 3.42E-111 0 1207.7 1082.3 1260.4 1115.9 1093.3 958.44 1246.5 1130.6 1034.8 1153.8 TRUE FALSE 1104.978773 1011.842073 1174.84756 1201.846811 1049.751546 1012.706045 1163.348259 1120.715283 1142.371163 1296.741455 0.852119572 0.780295925 0.905999847 0.926820691 0.809530336 0.780962189 0.897132004 0.864254998 0.880955227 1 10.34067515 -9.094041947 0.837169451 1.001177456 0.848246013 0.47180846 0.04724786 1.931434098 1.992828216 0.053443068 0.01675175 8.05E-10 9.094041947 -0.152931443 THSDAS(ph)DDEAFTTSK ddPTM_A459_MK2206_30min_R2 1 THSDASDDEAFTTSK 15 0 Q13017-2;Q13017;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 THS(0.113)DAS(0.887)DDEAFTTSK 206.43 2.05E-06 6510300 11857 13971 11089 16868 15551 12681 17142 14901 12680 21219 TRUE FALSE 12764.78104 13277.22046 11458.70173 15489.83044 14940.3896 13163.58434 14891.23481 16848.61186 13782.88348 20526.62577 0.621864557 0.646829177 0.558236013 0.754621369 0.727854143 0.641293142 0.725459458 0.820817413 0.67146367 1 14.32520887 -14.52287875 0.12633423 2.049074443 0.548873134 0.725505576 0.061871045 76.72896686 0.615531335 20.35540263 0.510106093 3.00E-15 14.52287875 -1.500201308 THSLCNGDS(ph)PGPVQK ddPTM_A459_MK2206_30min_R2 2 THSLCNGDSPGPVQK 15 0 Q674X7-3;A0A1B0GWK2;Q674X7-4;Q674X7-2;Q674X7 Q674X7-3 KAZN Kazrin 1 THSLCNGDS(1)PGPVQK;THSLCNGDS(1)PGPVQK 200.81 1.61E-21 9167200 64440.5 88636 66458.4 101026 89130 81764.6 82658 61694.9 54058.1 85822 TRUE FALSE 69374.11423 84234.46513 68674.08989 92771.85263 85630.30836 84876.20915 71804.90531 69758.63526 58759.97582 83021.63517 0.835614886 1.014608601 0.827183056 1.117441887 1.031421607 1.022338442 0.864893894 0.840246462 0.707767026 1 16.34119973 -7.396545809 4.66940632 0.834278545 0.978554723 0.235948808 0.105986075 0.305370315 10.24899705 0.045674898 0.029948235 4.01E-08 7.396545809 0.144276178 THSTSS(ph)SLGSGESPFSR ddPTM_A459_MK2206_30min_R1 1 THSTSSSLGSGESPFSR 17 0 F8WBF9;Q5TH30;Q9UGV2-3;Q9UGV2-2;Q9UGV2 F8WBF9 NDRG3 Protein NDRG3 1 THS(0.001)T(0.001)S(0.027)S(0.664)S(0.305)LGS(0.002)GESPFSR 80.733 0.010754 55111000 1666.7 901.03 1018.2 951.1 1935 2367.7 2685.4 1550.8 1249.9 1371.6 TRUE FALSE 1524.938413 842.3727832 949.0874209 1024.353887 1857.924853 2501.757128 2506.261866 1537.241519 1379.831578 1541.524163 0.989240681 0.546454479 0.615681183 0.664507188 1.205251852 1.622911394 1.625833656 0.997221812 0.895108627 1 10.59014179 -6.287809069 5.665073336 1.267353242 0.685046705 0.493164164 0.256319256 0.155906745 16.32072529 0.086061492 0.10084996 5.15E-07 6.287809069 -0.582306537 THSTSS(ph)SLGSGESPFSR ddPTM_A459_MK2206_30min_R2 1 THSTSSSLGSGESPFSR 17 0 F8WBF9;Q5TH30;Q9UGV2-3;Q9UGV2-2;Q9UGV2 F8WBF9 NDRG3 Protein NDRG3 1 T(0.005)HS(0.001)T(0.002)S(0.023)S(0.926)S(0.043)LGSGESPFSR 110.98 0.0013726 62754000 15594 23347 17614 33863 30113 25461 26311 24461 24081 18757 TRUE FALSE 16787.88863 22187.62193 18201.24197 31096.28458 28930.61231 26429.9362 22856.33409 27658.13669 26175.52185 18144.96063 0.925209427 1.22279802 1.003101762 1.713769747 1.594415822 1.456599259 1.259651898 1.524287501 1.442578046 1 14.14728131 -5.741431987 24.99828265 1.450369252 1.0676124 0.433829997 0.195811459 219.4282613 274163.0105 0.051532144 0.089110527 1.81E-06 5.741431987 -0.382756852 THSTSSS(ph)LGSGESPFSR ddPTM_A459_MK2206_30min_R1 1 THSTSSSLGSGESPFSR 17 0 F8WBF9;Q5TH30;Q9UGV2-3;Q9UGV2-2;Q9UGV2 F8WBF9 NDRG3 Protein NDRG3 1 THSTS(0.001)S(0.361)S(0.637)LGSGESPFSR 102.47 0.0034779 0 2053.3 1146.6 1464.1 968.1 2115.8 1954.2 2162.9 1928.7 1554.2 1155.1 TRUE FALSE 1878.656053 1071.956132 1364.720971 1042.66323 2031.523206 2064.845115 2018.616887 1911.837579 1715.764652 1298.202509 1.447120954 0.825723356 1.051238895 0.803159155 1.564873887 1.590541616 1.554932204 1.472680546 1.321646384 1 10.34229973 -6.270106793 24.99171886 1.456608923 1.018477806 0.393596028 0.231217721 559.0286473 1611906.672 0.068500233 0.078886349 5.37E-07 6.270106793 -0.438131118 THTDTESEAS(ph)ILGDSGEYK ddPTM_A459_MK2206_30min_R1 2 THTDTESEASILGDSGEYK 19 0 J3KQ48;Q9Y3E5 J3KQ48 PTRH2 "Peptidyl-tRNA hydrolase 2, mitochondrial" 1 THTDTESEAS(0.999)ILGDS(0.001)GEYK;THTDTESEAS(1)ILGDSGEYK 88.765 0.0020257 2940200 2316.76 2590.94 1792.43 1986.99 3033.16 2577.67 2663.99 2366.33 2651.24 2225.8 TRUE FALSE 2119.707396 2422.269335 1670.764846 2140.028314 2912.342814 2723.615448 2486.280088 2345.641426 2926.845886 2501.548908 0.847357967 0.968307806 0.667892137 0.855481301 1.164215821 1.088771616 0.993896254 0.937675621 1.170013457 1 11.28860594 -6.160477311 6.861287426 1.053783907 0.829796854 0.565677569 0.09635646 0.199201129 11.70965378 0.029027267 0.037624204 6.91E-07 6.160477311 -0.223987053 THYDPPR ddPTM_A459_MK2206_30min_R2 3 THYDPPR 7 0 P31943;G8JLB6;E9PCY7;H0YB39;D6RBM0;H0YBD7;E5RGV0;E7EN40;P55795 P31943;P55795 HNRNPH1;HNRNPH2 "Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2" 0 ;; 120.49 0.013186 22096400 96260 122860 110481 142399 118131 127955 122055 100368 101659 115441 FALSE TRUE 103629.7396 116758.9511 114164.3814 130764.5462 113492.5834 132824.4172 106029.0319 113486.4422 110501.1161 111674.1696 0.927965168 1.045532297 1.022298906 1.17094711 1.016283208 1.189392477 0.949449924 1.016228216 0.989495749 1 16.768936 -10.33940211 7.464312057 1 1.04096798 0.015380278 0.080193358 1.11E-10 0 0.076828622 0.018633678 4.58E-11 10.33940211 0.04096798 THYDPPRK ddPTM_A459_MK2206_30min_R1 1 THYDPPRK 8 1 P31943;G8JLB6;E9PCY7;H0YB39;D6RBM0;H0YBD7;E5RGV0;E7EN40;P55795 P31943;P55795 HNRNPH1;HNRNPH2 "Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2" 0 71.296 0.046585 4581000 3287 3401.1 2816.7 3468.7 1524.2 2158 3442.2 3818.1 434.24 1718.8 FALSE TRUE 3007.423389 3179.687772 2625.510252 3735.859875 1463.487886 2280.184095 3212.577119 3784.718754 479.3808019 1931.73792 1.556848555 1.646024411 1.359144128 1.933937226 0.757601676 1.180379632 1.663050192 1.959229932 0.248160373 1 10.91568366 -7.701628332 0.2676965 0.861510457 1.679666994 0.160102718 0.472049849 4.054850289 1.090031635 1.06309191 1.25032964 1.99E-08 7.701628332 0.818156537 TIAATPIQTLPQSQST(ph)PK ddPTM_A459_MK2206_30min_R1 1 TIAATPIQTLPQSQSTPK 18 0 A0A0C4DG88;P14859-4;P14859-5;P14859-3;P14859;P14859-2;P14859-6 A0A0C4DG88 POU2F1 "POU domain protein;POU domain, class 2, transcription factor 1" 1 TIAATPIQTLPQSQS(0.205)T(0.795)PK 286.57 4.79E-68 6416500 4082.6 4177.5 4018.8 4164.8 2961.6 2517 3218.1 2782.4 3382.7 3249.9 TRUE FALSE 3735.353431 3905.543991 3746.015053 4485.573618 2843.633201 2659.510365 3003.426421 2758.07377 3734.34377 3652.522147 1.022677832 1.069273185 1.025596807 1.228075679 0.778539619 0.728129839 0.822288353 0.755114866 1.022401404 1 11.83467731 -6.275293553 24.98913006 0.831247756 1.080838611 0.536780066 0.106090457 567.174016 1023024.111 0.03222366 0.03672145 5.31E-07 6.275293553 0.249590855 TIAATPIQTLPQSQST(ph)PK ddPTM_A459_MK2206_30min_R2 2 TIAATPIQTLPQSQSTPK 18 0 A0A0C4DG88;P14859-4;P14859-5;P14859-3;P14859;P14859-2;P14859-6 A0A0C4DG88 POU2F1 "POU domain protein;POU domain, class 2, transcription factor 1" 1 TIAATPIQTLPQSQS(0.227)T(0.772)PK;TIAATPIQTLPQSQS(0.173)T(0.827)PK 214.54 6.78E-12 13691300 144806 132961 122981 118661 109624 87586 143130 103633 92732 139856 TRUE FALSE 155892.4587 126358.3501 127081.1252 108966.0167 105319.6109 90919.1466 124336.8591 117178.1889 100797.6617 135292.5102 1.152262298 0.933964119 0.939306433 0.805410563 0.778458547 0.672019068 0.919022486 0.866109948 0.745035047 1 17.04572245 -4.457763253 1.023886234 0.819468514 1.522246179 0.531007944 0.090336378 2.495458516 1.361305672 0.028805039 2.249076341 3.49E-05 4.457763253 0.702777665 TIAHS(ph)PTSFTESSSK ddPTM_A459_MK2206_30min_R1 1 TIAHSPTSFTESSSK 15 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 T(0.001)IAHS(0.961)PT(0.034)S(0.004)FTESSSK 194.77 3.28E-05 5246300 1532 1055.2 1189 833.1 1707.5 1573.8 1056.7 1389.9 934.29 732.36 TRUE FALSE 1401.695355 986.5062882 1108.293993 897.2655064 1639.486659 1662.907196 986.2094711 1377.748251 1031.412789 823.0902858 1.702966709 1.198539583 1.346503551 1.090117964 1.991867341 2.020321737 1.19817897 1.673872568 1.253097997 1 9.68490688 -8.517412315 4.612911506 1.000536964 1.515985138 0.231930899 0.308745217 0.25465409 18.16328899 0.311869953 0.081316731 3.04E-09 8.517412315 0.515448173 TIAHS(ph)PTSFTESSSK ddPTM_A459_MK2206_30min_R2 2 TIAHSPTSFTESSSK 15 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 T(0.018)IAHS(0.956)PT(0.02)S(0.006)FT(0.001)ESSSK;T(0.001)IAHS(0.987)PT(0.009)S(0.002)FT(0.001)ESSSK 73.057 0.029255 22725800 100109 128382 89671 166127 130933 136730 221102 149062 105550 103901 TRUE FALSE 107773.422 122006.7366 92660.58638 152553.8927 125791.9125 141933.356 192071.0418 168544.9152 114730.5482 100510.7189 1.072257996 1.213867913 0.921897559 1.517787301 1.251527339 1.412121588 1.910950831 1.676884984 1.14147575 1 16.61698984 -5.771141341 24.99914251 1.457655378 1.083793821 0.2677018 0.255811891 242.8010105 625628.4139 0.073429664 0.110466322 1.69E-06 5.771141341 -0.373861556 TIAQDYGVLK ddPTM_A459_MK2206_30min_R2 2 TIAQDYGVLK 10 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ; 155.15 0.0073436 11273800 56963 61028 65243 71955 63708 61150 63972 54041 56630 59957 FALSE TRUE 61324.13108 57997.43826 67418.16906 66076.04633 61206.50381 63477.1061 55572.39956 61104.34425 61555.57504 58000.608 1.057301521 0.99994535 1.16237004 1.139230236 1.055273486 1.094421391 0.958134776 1.053512133 1.061291893 1 15.8237804 -7.212698329 24.99898264 1.022693929 1.08556571 0.296283726 0.050027 554.7617664 284534.0513 0.020202885 0.015649072 6.13E-08 7.212698329 0.06287178 TICTFDSSGFES(ph)MSPIKETVSSR ddPTM_A459_MK2206_30min_R1 2 TICTFDSSGFESMSPIKETVSSR 23 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 TICT(0.002)FDS(0.013)S(0.013)GFES(0.777)MS(0.194)PIKETVSSR;TICTFDSSGFES(0.645)MS(0.342)PIKET(0.006)VS(0.006)S(0.001)R 112.74 7.19E-06 112967000 3755.5 3799.3 3743.8 2846.71 3485.3 3242.3 3768.7 3344.9 3032.3 2526.78 TRUE FALSE 3436.075004 3551.964879 3489.681287 3065.964097 3346.473121 3425.876224 3517.296899 3315.655892 3347.518436 2839.816583 1.209963709 1.250772638 1.228840379 1.07963455 1.178411712 1.206372357 1.238564815 1.167559874 1.178779805 1 11.47158204 -13.59571731 0.337254685 3.35E-12 1.200479048 0.621375694 0.045499072 138.3967686 2.158648986 97.45763507 0.040382792 2.54E-14 13.59571731 1.200479048 TICTFDSSGFES(ph)MSPIKETVSSR ddPTM_A459_MK2206_30min_R2 1 TICTFDSSGFESMSPIKETVSSR 23 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 TICTFDS(0.007)S(0.001)GFES(0.868)MS(0.123)PIKETVSSR 109.65 3.10E-05 10995000 41737 43574 38324 42395 47888 41187 45358 33767 35372 41566 TRUE FALSE 44932.41681 41410.17852 39601.70303 38931.19289 46007.6765 42754.40015 39402.44012 38180.46284 38448.59262 40209.70482 1.117452043 1.029855322 0.984879228 0.968203896 1.144193341 1.063285601 0.979923635 0.949533527 0.956201812 1 15.29525613 -7.351744057 4.958621892 0.965149756 1.047627244 0.363932419 0.05159132 0.277371773 11.35772032 0.023815886 0.015813373 4.45E-08 7.351744057 0.082477488 TICTFDSSGFESMS(ph)PIKETVSSR ddPTM_A459_MK2206_30min_R1 1 TICTFDSSGFESMSPIKETVSSR 23 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 TICTFDS(0.001)S(0.001)GFES(0.007)MS(0.991)PIKETVSSR 141 1.34E-06 117660000 4088.9 3738.8 3467.2 3282 3275.8 3083.7 3118.4 3513.3 3052.9 2839.4 TRUE FALSE 3741.117583 3495.40344 3231.856124 3534.780209 3145.317949 3258.296429 2910.377226 3482.583589 3370.25988 3191.166308 1.172335511 1.095337285 1.012750766 1.107676588 0.985632727 1.021036234 0.912010514 1.091319991 1.056121667 1 11.63986808 -2.949582945 0.690008661 1.016119026 3.099238515 0.456719015 0.05201163 29.99557121 1.351544393 0.021177492 83.12715984 0.001123096 2.949582945 2.083119489 TICTFDSSGFESMS(ph)PIKETVSSR ddPTM_A459_MK2206_30min_R2 5 TICTFDSSGFESMSPIKETVSSR 23 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 TICTFDSSGFES(0.208)MS(0.791)PIKET(0.001)VSSR;TICT(0.009)FDS(0.025)S(0.007)GFES(0.066)MS(0.88)PIKET(0.013)VSSR;TICTFDS(0.002)S(0.001)GFES(0.184)MS(0.814)PIKETVSSR;TICTFDS(0.042)S(0.102)GFES(0.102)MS(0.72)PIKET(0.034)VSSR;TICTFDSSGFES(0.001)MS(0.991)PIKET(0.007)VSSR 122.35 5.78E-06 97452700 159903 185251 154905 180030 183271 166554 193910 145756 147016 168982 TRUE FALSE 172145.2966 176051.7047 160069.4554 165320.9731 176074.8597 172892.3292 168449.3841 164806.8097 159803.1859 163468.1312 1.053081695 1.076978757 0.97920894 1.011334576 1.077120405 1.057651592 1.030472318 1.008189232 0.977580063 1 17.31864988 -7.837462183 2.653480417 0.98952522 1.041423358 0.366988039 0.028349184 0.336513799 4.681101475 0.020565275 0.008550974 1.45E-08 7.837462183 0.051898138 TICYT(ph)PTSSSMSSNLTR ddPTM_A459_MK2206_30min_R2 1 TICYTPTSSSMSSNLTR 17 0 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 TICYT(0.776)PT(0.105)S(0.047)S(0.047)S(0.012)MS(0.004)S(0.003)NLT(0.005)R 98.552 0.015985 0 7272.5 9677.4 7704.2 8004.9 7589.9 10998 10608 6890.4 7218.9 7824 TRUE FALSE 7829.288192 9196.834388 7961.054183 7350.874064 7291.88239 11416.5366 9215.156858 7790.998938 7846.786873 7568.703521 1.034429235 1.215113574 1.051838556 0.971219713 0.963425555 1.508387343 1.217534394 1.029370343 1.036741214 1 12.88583048 -7.851309961 9.625736178 1.023734574 1.138237061 0.109820861 0.150549438 0.857378225 84.20543757 0.08913438 0.042765203 1.41E-08 7.851309961 0.114502487 TIDFDSLS(ph)VGR ddPTM_A459_MK2206_30min_R1 1 TIDFDSLSVGR 11 0 A0A1C7CYX9 A0A1C7CYX9 1 TIDFDS(0.002)LS(0.998)VGR 101.56 0.015157 5239100 3108.4 2719.3 3017.6 2293.2 3957.6 2733.2 3299.7 3359.1 2982.6 2375.5 TRUE FALSE 2844.014257 2542.273076 2812.77372 2469.822661 3799.960412 2887.951422 3079.583034 3329.731743 3292.651943 2669.794874 1.065255719 0.952235357 1.053554244 0.925098286 1.423315495 1.08171285 1.153490504 1.247186357 1.233297725 1 11.38251319 -6.224449086 24.99997804 1.194970071 0.99958716 0.413073961 0.111316633 545.6829394 368800.9879 0.031109492 0.040161346 5.96E-07 6.224449086 -0.195382911 TIDLGAAAHYT(ph)GDKASPDQNASTHTPQSSVK ddPTM_A459_MK2206_30min_R1 1 TIDLGAAAHYTGDKASPDQNASTHTPQSSVK 31 1 Q14677-2;Q14677;Q14677-3 Q14677-2 CLINT1 Clathrin interactor 1 1 TIDLGAAAHY(0.145)T(0.677)GDKAS(0.173)PDQNAS(0.002)T(0.003)HTPQSSVK 85.712 7.38E-07 41591000 5015.6 2512.8 3552.1 2135.1 6205.5 5463.3 6093.6 5039.3 2545.9 2557.2 TRUE FALSE 4588.996882 2349.216263 3310.993349 2299.545772 5958.321795 5772.627325 5687.107062 4995.241931 2810.555416 2874.005242 1.5967253 0.817401524 1.152048472 0.800118851 2.07317708 2.008565343 1.978808869 1.738076834 0.977922856 1 11.48884698 -6.256172114 24.99455389 1.7027552 1.07630946 0.274491696 0.418009104 520.3088396 2469000.024 0.124796757 0.156355948 5.54E-07 6.256172114 -0.62644574 TIDLGAAAHYT(ph)GDKASPDQNASTHTPQSSVK ddPTM_A459_MK2206_30min_R2 1 TIDLGAAAHYTGDKASPDQNASTHTPQSSVK 31 1 Q14677-2;Q14677;Q14677-3 Q14677-2 CLINT1 Clathrin interactor 1 1 T(0.002)IDLGAAAHY(0.218)T(0.27)GDKAS(0.243)PDQNAS(0.112)T(0.138)HT(0.017)PQSSVK 45.193 0.010766 39205000 24088 35364 34884 43230 54494 39936 50271 32409 44486 37477 TRUE FALSE 25932.1958 33607.87518 36047.01515 39697.97071 52354.29175 41455.79246 43670.35731 36644.96758 48355.31187 36254.12856 0.715289453 0.92700822 0.994287177 1.094991723 1.444091855 1.143477836 1.204562323 1.010780538 1.333787731 1 15.14585768 -5.22703508 1.290927314 1.188389228 0.703966853 0.562201188 0.130874526 0.518186297 1.259393302 0.040571058 0.268716058 5.93E-06 5.22703508 -0.484422375 TIDLGAAAHYTGDKAS(ph)PDQNASTHTPQSSVK ddPTM_A459_MK2206_30min_R1 1 TIDLGAAAHYTGDKASPDQNASTHTPQSSVK 31 1 Q14677-2;Q14677;Q14677-3 Q14677-2 CLINT1 Clathrin interactor 1 1 TIDLGAAAHYT(0.006)GDKAS(0.993)PDQNASTHTPQSSVK 100.59 1.01E-08 39272000 1379.8 809.02 1081.9 857.49 1919.4 1703.7 1446 1592.2 771.01 722.41 TRUE FALSE 1262.440764 756.352651 1008.463642 923.5340284 1842.946234 1800.162022 1349.539978 1578.279563 851.1592486 811.9076047 1.554906934 0.931574783 1.242091633 1.137486609 2.269896504 2.217200592 1.662184183 1.943915236 1.048344964 1 9.665171747 -6.223581392 24.7027306 1.762396366 1.197988838 0.219204094 0.424556858 637.1657486 415756.9935 0.123995773 0.160074081 5.98E-07 6.223581392 -0.564407528 TIDLGAAAHYTGDKAS(ph)PDQNASTHTPQSSVK ddPTM_A459_MK2206_30min_R2 2 TIDLGAAAHYTGDKASPDQNASTHTPQSSVK 31 1 Q14677-2;Q14677;Q14677-3 Q14677-2 CLINT1 Clathrin interactor 1 1 TIDLGAAAHY(0.012)T(0.03)GDKAS(0.945)PDQNAS(0.006)T(0.006)HT(0.001)PQSSVK;TIDLGAAAHY(0.148)T(0.17)GDKAS(0.548)PDQNAS(0.066)T(0.066)HTPQSSVK 78.752 8.60E-06 73065000 105171 212755 151807 236389 263145 226932 274002 185727 241247 201339 TRUE FALSE 113222.9726 202189.8961 156868.1696 217075.2625 252812.6051 235568.0563 238025.2083 210002.1566 262230.228 194769.3249 0.581318299 1.038099281 0.805404905 1.114524901 1.298010378 1.209472058 1.222087761 1.078209604 1.346363079 1 17.57140695 -4.40834891 0.670602174 1.201192937 2.37E-11 0.628046765 0.134689838 3.184525683 0.761738078 0.057305202 3.265217618 3.91E-05 4.40834891 -1.201192937 TIEAAEALLHMES(ph)PTCLR ddPTM_A459_MK2206_30min_R1 2 TIEAAEALLHMESPTCLR 18 0 Q15723-2;Q15723-3;Q15723-1;Q15723;Q15723-4;D6RHI1 Q15723-2 ELF2 ETS-related transcription factor Elf-2 1 TIEAAEALLHMES(0.848)PT(0.152)CLR;TIEAAEALLHMES(0.579)PT(0.421)CLR 149.8 0.00010625 3643600 4078 4073 3780.9 3092.3 3753 3944.2 3974.1 3915.6 3548.3 3599.6 TRUE FALSE 3731.144686 3807.84696 3524.263042 3330.469482 3603.510063 4167.517195 3708.99504 3881.366322 3917.158483 4045.545624 0.922284664 0.94124435 0.871146533 0.823243585 0.890735243 1.030149597 0.916809594 0.959417266 0.968264567 1 11.98211858 -6.669018701 10.53830583 0.968708564 0.887608112 0.528042687 0.040039029 0.338582603 35.97253568 0.013989102 0.013983626 2.14E-07 6.669018701 -0.081100451 TIET(ph)SPSLSR ddPTM_A459_MK2206_30min_R1 1 TIETSPSLSR 10 0 H3BP78;F8W7R3;Q9NVI1-2;Q9NVI1-1;Q9NVI1 H3BP78 FANCI Fanconi anemia group I protein 1 TIET(0.498)S(0.498)PS(0.003)LSR 166.86 0.00073275 25000000 3795.4 3944.3 3853.5 3692.1 4210.8 3825.7 4213.3 3722.8 3409.4 3392.3 TRUE FALSE 3472.5813 3687.525353 3591.935156 3976.466182 4043.074919 4042.307828 3932.238445 3690.251952 3763.819331 3812.563735 0.91082577 0.967203596 0.942131176 1.042990087 1.060460939 1.060259738 1.031389563 0.967918757 0.987214796 1 11.89654574 -5.753290708 24.8790682 1.023780444 0.942768491 0.587147557 0.031215399 134.9410494 411989.6924 0.009583828 0.01623715 1.76E-06 5.753290708 -0.081011953 TIET(ph)SPSLSR ddPTM_A459_MK2206_30min_R2 1 TIETSPSLSR 10 0 H3BP78;F8W7R3;Q9NVI1-2;Q9NVI1-1;Q9NVI1 H3BP78 FANCI Fanconi anemia group I protein 1 T(0.001)IET(0.452)S(0.452)PS(0.095)LSR 123.62 0.0095811 24369000 154800 208480 169400 200290 202990 227840 235240 149020 191410 207220 TRUE FALSE 166651.607 198127.1864 175047.7115 183925.6663 195019.5927 236510.6109 204352.7054 168497.4257 208058.4958 200458.4284 0.831352457 0.988370447 0.873236974 0.917525234 0.972868012 1.179848674 1.019426856 0.840560445 1.037913434 1 17.61294355 -6.343676582 4.1827486 1.011790973 0.906329907 0.276619835 0.085170975 0.353837838 11.47482898 0.028551921 0.03292966 4.53E-07 6.343676582 -0.105461065 TIETS(ph)PSLSR ddPTM_A459_MK2206_30min_R2 1 TIETSPSLSR 10 0 H3BP78;F8W7R3;Q9NVI1-2;Q9NVI1-1;Q9NVI1 H3BP78 FANCI Fanconi anemia group I protein 1 T(0.089)IET(0.1)S(0.605)PS(0.205)LSR 131.42 0.0026131 30018000 149880 207310 202130 228730 217390 231580 236060 156720 202330 194120 TRUE FALSE 161354.928 197015.2869 208868.9133 210042.0273 208854.1763 240392.9392 205065.0384 177203.8421 219928.2977 187785.8803 0.859249523 1.049148565 1.112271663 1.118518746 1.112193185 1.280143847 1.092015215 0.943648382 1.171165251 1 17.51872906 -4.742355775 2.397803865 1.108338171 0.784888381 0.423930908 0.08532129 0.641721515 4.145947169 0.022922934 0.454598508 1.81E-05 4.742355775 -0.32344979 TIGGGDDS(ph)FNTFFSETGAGK ddPTM_A459_MK2206_30min_R1 2 TIGGGDDSFNTFFSETGAGK 20 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;F8VQQ4;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;F8VXZ7;F8W0F6;P68363;P68363-2 Q9BQE3;P68363 TUBA1C;TUBA1B;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain 1 T(0.001)IGGGDDS(0.932)FNT(0.066)FFS(0.001)ETGAGK;T(0.126)IGGGDDS(0.858)FNT(0.016)FFSETGAGK 235.37 8.11E-25 29147000 2647.6 2533.98 2334.31 2003.27 2277.39 2056.37 2452.24 2277.09 2050.01 1724.7 TRUE FALSE 2422.407717 2369.017441 2175.863541 2157.562203 2186.676734 2172.799892 2288.655544 2257.181642 2263.115876 1938.368857 1.249714526 1.222170607 1.122522957 1.113081339 1.128101458 1.120942428 1.18071209 1.164474777 1.167536234 1 10.92062742 -14.52287874 0.258153007 4.22E-10 1.173037796 0.568247281 0.04281574 165.6045768 1.627596935 87.99890628 0.06480846 3.00E-15 14.52287874 1.173037796 TIGGGDDS(ph)FNTFFSETGAGK ddPTM_A459_MK2206_30min_R2 4 TIGGGDDSFNTFFSETGAGK 20 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;F8VQQ4;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;F8VXZ7;F8W0F6;P68363;P68363-2 Q9BQE3;P68363 TUBA1C;TUBA1B;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain 1 TIGGGDDS(0.853)FNT(0.004)FFS(0.132)ET(0.011)GAGK;TIGGGDDS(0.996)FNT(0.004)FFSETGAGK;TIGGGDDS(0.973)FNT(0.027)FFSETGAGK;TIGGGDDS(0.992)FNT(0.008)FFSETGAGK 191.35 1.28E-15 41134900 264689 334578 292316 311880 365113 286192 371099 265394 262140 343074 TRUE FALSE 284953.7934 317963.343 302061.6695 286398.4063 350776.8291 297083.2371 322373.2555 300081.907 284940.4634 331879.5235 0.85860613 0.958068578 0.910154584 0.862958954 1.056940258 0.895153862 0.971356269 0.904189279 0.858565965 1 18.34030009 -4.748841191 24.31103374 0.932903637 0.858605882 0.129598385 0.059316368 922.0712827 1779189.242 0.014243697 0.239585361 1.78E-05 4.748841191 -0.074297755 TIGGGDDS(ph)FTTFFCETGAGK ddPTM_A459_MK2206_30min_R1 1 TIGGGDDSFTTFFCETGAGK 20 0 P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2 P68366-2 TUBA4A Tubulin alpha-4A chain 1 T(0.246)IGGGDDS(0.61)FT(0.127)T(0.016)FFCET(0.002)GAGK 57.216 0.02592 3854400 2681.3 2511.1 2470.2 2531.9 2484 2195.5 2483.6 2259.1 2231.8 2212.9 TRUE FALSE 2453.241355 2347.626934 2302.529706 2726.907377 2385.05702 2319.807313 2317.923576 2239.348927 2463.803597 2487.050759 0.986405825 0.943940097 0.925807283 1.096442189 0.958990086 0.932754309 0.931996891 0.900403387 0.990652719 1 11.28022024 -6.512352859 24.8850666 0.943975913 0.986435359 0.101663364 0.050068476 1030.489067 2436264.194 0.016275838 0.017329978 3.07E-07 6.512352859 0.042459446 TIGGGDDSFNT(ph)FFSETGAGK ddPTM_A459_MK2206_30min_R1 2 TIGGGDDSFNTFFSETGAGK 20 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;F8VQQ4;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;F8VXZ7;F8W0F6;P68363;P68363-2 Q9BQE3;P68363 TUBA1C;TUBA1B;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain 1 TIGGGDDS(0.001)FNT(0.983)FFS(0.016)ETGAGK;TIGGGDDS(0.194)FNT(0.802)FFS(0.003)ETGAGK 301.82 2.86E-100 23219400 3920.1 4344.7 4096.4 3306.5 4447 4076.5 4124.8 3578.5 3090.5 3424.6 TRUE FALSE 3586.67491 4061.85924 3818.347781 3561.167203 4269.866573 4307.307907 3849.642118 3547.213552 3411.768534 3848.865302 0.931878522 1.055339411 0.992071034 0.92525119 1.109383218 1.119111106 1.00020183 0.921625797 0.886434901 1 11.91021747 -7.677652766 4.819524648 0.928125827 1.024494306 0.249514491 0.066089736 0.277301125 11.28228739 0.034437885 0.018952931 2.10E-08 7.677652766 0.09636848 TIGGGDDSFNT(ph)FFSETGAGK ddPTM_A459_MK2206_30min_R2 1 TIGGGDDSFNTFFSETGAGK 20 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;F8VQQ4;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;F8VXZ7;F8W0F6;P68363;P68363-2 Q9BQE3;P68363 TUBA1C;TUBA1B;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain 1 TIGGGDDS(0.034)FNT(0.951)FFS(0.014)ETGAGK 122.78 0.00056326 2572800 20186 25110 22858 25841 29695 23598 24860 18721 23400 23228 TRUE FALSE 21731.45568 23863.07391 23620.07431 23729.70764 28529.02509 24496.03843 21595.85214 21167.89898 25435.2897 22470.07226 0.967128874 1.061993644 1.051179277 1.056058359 1.269645454 1.090162868 0.961094023 0.942048549 1.131962969 1 14.45571714 -9.883011386 7.141773682 0.999997021 1.059588359 0.036610917 0.090802712 0 0 0.093729703 0.022732792 1.31E-10 9.883011386 0.059591339 TIGGGDDSFNTFFSETGAGK ddPTM_A459_MK2206_30min_R1 2 TIGGGDDSFNTFFSETGAGK 20 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;F8VQQ4;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;F8VXZ7;F8W0F6;P68363;P68363-2 Q9BQE3;P68363 TUBA1C;TUBA1B;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain 0 ; 370.14 9.25E-240 58670000 7303.6 7887.3 8450 8504.9 8368.1 7877.4 7829 7608.1 6252 7481.7 FALSE TRUE 6682.390467 7373.835336 7876.437543 9159.948872 8034.780857 8323.41158 7306.741695 7541.583184 6901.917773 8408.58948 0.794710038 0.876940818 0.936713293 1.089356175 0.955544432 0.989870132 0.868961639 0.8968904 0.820817545 1 13.0376481 -10.47191244 17.90279945 0.999999907 0.920696774 0.086689072 0.081060597 0 0 0.084522219 0.020499649 3.37E-11 10.47191244 -0.079303133 TIGGGDDSFNTFFSETGAGK ddPTM_A459_MK2206_30min_R2 2 TIGGGDDSFNTFFSETGAGK 20 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;F8VQQ4;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;F8VXZ7;F8W0F6;P68363;P68363-2 Q9BQE3;P68363 TUBA1C;TUBA1B;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain 0 ; 265.64 2.74E-47 17645300 77297 92228 88497 96353 100510 91042 101570 64618 80330 91558 FALSE TRUE 83214.91775 87648.09163 91447.44581 88480.65168 96563.47238 94506.66711 88233.73699 73063.79447 87316.9582 88570.46996 0.939533434 0.989585938 1.032482337 0.998985912 1.090244552 1.067022306 0.996198135 0.824922737 0.985847295 1 16.43453815 -7.540443774 24.97307042 0.92534306 1.022003454 0.277740632 0.058731611 269.0003515 382446.4339 0.027505411 0.015884118 2.88E-08 7.540443774 0.096660393 TIGYEGIHS(ph)PSVLPSGGEESR ddPTM_A459_MK2206_30min_R2 1 TIGYEGIHSPSVLPSGGEESR 21 0 Q8TE76-2;Q8TE76-3;Q8TE76 Q8TE76-2 MORC4 MORC family CW-type zinc finger protein 4 1 TIGY(0.002)EGIHS(0.605)PS(0.392)VLPS(0.001)GGEESR 89.803 0.0023982 0 14433 25297 17249 23263 21418 23237 19133 17679 20529 18697 TRUE FALSE 15538.00158 24040.78777 17824.07305 21362.33849 20577.0217 24121.30032 16620.81412 19989.706 22314.57531 18086.91842 0.859074012 1.32918097 0.985467653 1.181093318 1.13767427 1.333632394 0.918941178 1.10520242 1.233741138 1 14.14265901 -4.730933733 24.72317951 1.135525334 0.859072022 0.280470907 0.133112336 4611.030963 3736753.396 0.031431482 4.076985069 1.86E-05 4.730933733 -0.276453313 TIHT(ph)FPCLK ddPTM_A459_MK2206_30min_R1 1 TIHTFPCLK 9 0 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 TIHT(1)FPCLK 86.014 0.046646 11717000 6321.1 7049.4 8065.2 7032.3 7970.7 7319 7546.9 7129.6 6836.9 6087.8 TRUE FALSE 5783.457252 6590.482779 7517.756695 7573.928964 7653.210141 7733.395455 7043.460071 7067.266659 7547.620221 6842.002625 0.845287202 0.963238856 1.098765538 1.106975454 1.118562877 1.130282445 1.029444222 1.032923699 1.103130273 1 12.74020294 -4.972187331 2.563334938 1.081332367 0.836466108 0.757587727 0.041699945 0.165940149 1.866360681 0.011497555 0.074121396 1.07E-05 4.972187331 -0.244866258 TILETS(ph)FHQHR ddPTM_A459_MK2206_30min_R2 2 TILETSFHQHR 11 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 TILET(0.048)S(0.952)FHQHR;T(0.008)ILET(0.257)S(0.735)FHQHR 107.53 0.0069411 9514200 34506 37557 35971 38818 39265 39540 37322 27661 29433 32726 TRUE FALSE 37147.80589 35691.97399 37170.25519 35646.44523 37723.25881 41044.72241 32421.57657 31276.38767 31993.02914 31658.1533 1.173404069 1.127418067 1.174113185 1.12597993 1.191581153 1.296497683 1.024114586 0.987941001 1.01057787 1 14.95028948 -7.410244956 7.39261337 1.000787664 1.176388853 0.789008642 0.044622534 0.126699232 7.427628891 0.01974456 0.013237142 3.89E-08 7.410244956 0.175601189 TILS(ph)LMTR ddPTM_A459_MK2206_30min_R1 1 TILSLMTR 8 0 P53396;P53396-2 P53396 ACLY ATP-citrate synthase 1 T(0.005)ILS(0.676)LMT(0.319)R 81.525 0.043521 8263000 680.64 955.58 808.78 743.04 840.66 750 909.55 743.1 618.91 592.01 TRUE FALSE 622.7479938 893.3715683 753.882267 800.2690695 807.1747321 792.4643519 848.8755791 736.603155 683.2479093 665.3526682 0.935966779 1.342703819 1.133056652 1.20277427 1.21315322 1.191044073 1.275828023 1.107086798 1.026895873 1 9.377975429 -8.080541222 3.370431388 1.014770401 1.191254319 0.314514059 0.100214323 0.279509922 5.846571053 0.07159291 0.024560493 8.31E-09 8.080541222 0.176483917 TIMQVSS(ph)GSRGSSGEAT(ph)R ddPTM_A459_MK2206_30min_R1 2 TIMQVSSGSRGSSGEATR 18 1 K7EJ87 K7EJ87 POLR2E 2 T(0.026)IMQVS(0.433)S(0.535)GS(0.006)RGSS(0.038)GEAT(0.962)R;T(0.036)IMQVS(0.422)S(0.508)GS(0.033)RGSS(0.024)GEAT(0.976)R 86.987 0.023752 95355000 389.15 400.3 298.54 412.86 591.36 697.75 619.1 592.68 531.62 571.55 TRUE FALSE 356.050749 374.2403972 278.2759366 444.6585487 567.804879 737.256002 577.8009686 587.4982612 586.8838014 642.357929 0.554287155 0.582604153 0.433210091 0.692228629 0.883938461 1.147733948 0.899500018 0.914596419 0.913639849 1 9.327233597 -6.165336335 2.658370297 0.967387412 0.531639005 0.862719914 0.079262928 0.098906876 1.363813322 0.025757416 0.034679861 6.83E-07 6.165336335 -0.435748407 TINEVENQILTR ddPTM_A459_MK2206_30min_R1 1 TINEVENQILTR 12 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144;P12814-4;P12814-3;P12814;P12814-2;H9KV75;H7C5W8;H0YJ11;H0YJW3 O43707;P12814-4 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 0 202.18 0.00093731 10018000 687.71 733.22 650.16 605.08 750.06 687.88 683.99 726.37 604.7 517.47 FALSE TRUE 629.2166532 685.4872447 606.0289506 651.6833664 720.1835219 726.8271711 638.3622751 720.0194237 667.5607289 581.5780903 1.081912582 1.178667588 1.042042265 1.120543186 1.238326433 1.249749919 1.097638109 1.238044272 1.147843669 1 9.18382911 -4.7486093 24.27292354 1.153903451 1.081912336 0.045863276 0.080325178 1358.940798 2570724.47 0.019829793 0.345574213 1.78E-05 4.7486093 -0.071991114 TIPIDGNFFT(ph)YTR ddPTM_A459_MK2206_30min_R1 1 TIPIDGNFFTYTR 13 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 1 TIPIDGNFFT(0.991)YT(0.009)R 184 0.00028546 24401000 2205.6 2754.4 2139.3 2022.5 2071.5 2277.8 3097 2317.9 1764.1 1906.9 TRUE FALSE 2018.002138 2575.088059 1994.090276 2178.2733 1988.987769 2406.767068 2890.404781 2297.634845 1947.484508 2143.141168 0.941609525 1.201548502 0.930452135 1.016392822 0.928071281 1.123009115 1.348676804 1.072087494 0.908705659 1 11.06551117 -6.792580274 24.9694621 1.111137654 1.011256415 0.090174043 0.128824785 455.418727 365161.6658 0.046894012 0.041360639 1.61E-07 6.792580274 -0.09988124 TIPIDGNFFT(ph)YTR ddPTM_A459_MK2206_30min_R2 3 TIPIDGNFFTYTR 13 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 1 TIPIDGNFFT(1)YTR;TIPIDGNFFT(0.989)YT(0.011)R;TIPIDGNFFT(0.99)YT(0.01)R 172.09 0.00043198 15249700 30560 36723.4 30650.7 32640 28195.1 33696 34793.1 30467.6 30457.2 33434.2 TRUE FALSE 32899.6971 34899.76936 31672.57904 29973.20759 27088.0187 34978.32489 30224.72418 34449.81993 33106.3122 32343.24479 1.017204591 1.07904354 0.979264117 0.926722343 0.837517042 1.081472348 0.934498823 1.065131843 1.023592791 1 14.9811768 -7.770244904 24.99641263 1.033271728 0.979661068 0.09688595 0.069939197 492.8215287 1398957.667 0.039419661 0.019384874 1.70E-08 7.770244904 -0.05361066 TIPIDGNFFTYT(ph)R ddPTM_A459_MK2206_30min_R1 1 TIPIDGNFFTYTR 13 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 1 TIPIDGNFFT(0.039)YT(0.961)R 116.58 0.0088446 19785000 1292.8 1708.6 1729 922.39 1460.6 1310.6 1761.4 1409.1 1667.6 1499.7 TRUE FALSE 1182.840571 1597.369829 1611.640297 993.4326376 1402.421209 1384.805039 1643.90022 1396.780387 1840.952988 1685.494158 0.701776726 0.947716028 0.956182666 0.589401413 0.832053438 0.821601803 0.975322407 0.828706751 1.092233384 1 10.71895591 -7.794418642 1.076835576 1.026032803 0.812160309 0.339900655 0.11580615 0.656603102 1.375544892 0.103008605 0.040395945 1.61E-08 7.794418642 -0.213872493 TIPIDGNFFTYTR ddPTM_A459_MK2206_30min_R1 2 TIPIDGNFFTYTR 13 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 150.09 0.0069524 124051000 2700.93 2972.1 3038.7 3002.9 3368.7 2704 2757 2629.3 2305.91 2269.2 FALSE TRUE 2471.20172 2778.61575 2832.44151 3234.183878 3234.517546 2857.098143 2573.08556 2606.312307 2545.617596 2550.325628 0.968974979 1.089514107 1.110619554 1.268145465 1.268276298 1.120287587 1.008924324 1.021952757 0.998153949 1 11.31646575 -7.213656981 4.524734879 1.008374685 1.147631105 0.380249462 0.081449561 0.252871933 11.56332595 0.036616294 0.027288062 6.11E-08 7.213656981 0.139256419 TIPIDGNFFTYTR ddPTM_A459_MK2206_30min_R2 2 TIPIDGNFFTYTR 13 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 256.31 1.74E-23 57047000 48349 56421 55296 52663 55748 53485 60369 39049 48238 46025 FALSE TRUE 52050.63661 53619.21518 57139.54104 48360.26444 53559.05341 55520.40915 52442.47778 44152.83838 52433.65405 44523.20802 1.169067525 1.204298108 1.283365319 1.086181041 1.202946863 1.246999298 1.177868355 0.991681425 1.177670172 1 15.44226993 -7.636316765 6.965055676 1.064365572 1.199055748 0.473915537 0.067391918 0.19385352 11.06221326 0.030874193 0.017655086 2.31E-08 7.636316765 0.134690176 TIPVKS(ph)PNLSEIK ddPTM_A459_MK2206_30min_R2 1 TIPVKSPNLSEIK 13 1 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 T(0.008)IPVKS(0.967)PNLS(0.025)EIK 62.469 0.047144 9273700 57444 74686 62403 66529 47687 46025 70717 51891 48032 56028 TRUE FALSE 61841.95681 70977.20184 64483.48487 61093.36788 45814.56877 47776.51363 61431.77295 58673.33187 52209.73654 54199.81095 1.140999493 1.309547037 1.189736343 1.127187841 0.845290195 0.881488566 1.133431499 1.082537574 0.963282632 1 15.7260002 -6.003048076 4.32550202 0.989624451 1.217812811 0.579056782 0.088594328 0.158253733 7.286892698 0.028396609 0.04056241 9.93E-07 6.003048076 0.22818836 TIPWLEDRVPQK ddPTM_A459_MK2206_30min_R1 1 TIPWLEDRVPQK 12 1 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 151.13 0.001496 9204300 1768 1698.5 1898.5 1942.4 2220.9 1792.8 1791.9 1912.1 1634.9 1212 FALSE TRUE 1617.622316 1587.927341 1769.63511 2092.003985 2132.43685 1894.306787 1672.365621 1895.382711 1804.853706 1362.15171 1.187549304 1.165749255 1.299146854 1.53580836 1.565491446 1.390672399 1.22773815 1.39146227 1.325001975 1 10.41167168 -8.586455768 17.58668653 0.999999998 1.349747674 0.395737416 0.127353599 1279.677003 353986.1176 0.1390421 0.035900479 2.59E-09 8.586455768 0.349747676 TIQAPTQVPVVVS(ph)PR ddPTM_A459_MK2206_30min_R2 2 TIQAPTQVPVVVSPR 15 0 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 TIQAPTQVPVVVS(1)PR;TIQAPTQVPVVVS(1)PR 150.92 0.00025643 20349100 56635 70021 62319 64327 58361 59465 67741 48558 51014 55295 TRUE FALSE 60971.01914 66543.85896 64396.68436 59071.27833 56069.4539 61727.98224 58846.52533 54904.69732 55451.10551 53490.72868 1.139842748 1.244026032 1.203884971 1.104327419 1.048208826 1.153994043 1.1001257 1.026433901 1.036648909 1 15.70700124 -6.484095163 0.341419947 0.995137266 1.24555985 0.652627889 0.044821875 1.461656692 0.312881786 0.055837578 0.138090775 3.28E-07 6.484095163 0.250422585 TIQEMQQK ddPTM_A459_MK2206_30min_R1 1 TIQEMQQK 8 0 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 167.24 0.035105 40326000 2340.6 2285.5 2793.3 2353.6 2209.3 2324.1 2135.8 2186.4 1381.9 1844.9 FALSE TRUE 2141.519679 2136.713535 2603.698579 2534.87468 2121.298903 2455.688534 1993.324679 2167.284535 1525.55345 2073.46014 1.032824137 1.030506202 1.255726372 1.222533595 1.023071947 1.184343256 0.96135182 1.045250156 0.735752485 1 11.0178246 -7.646839336 1.568044063 0.89003793 1.126601077 0.426240165 0.107300161 0.380413306 1.792084542 0.077833343 0.03351473 2.26E-08 7.646839336 0.236563148 TIQEVLEEQS(ph)EDEDR ddPTM_A459_MK2206_30min_R1 4 TIQEVLEEQSEDEDR 15 0 P18858-3;P18858;M0R0Q7;P18858-2 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 TIQEVLEEQS(1)EDEDR;TIQEVLEEQS(1)EDEDR;TIQEVLEEQS(1)EDEDR;TIQEVLEEQS(1)EDEDR 253.36 2.41E-28 84245400 10295 10641.8 8817 6682.26 8726.8 9181.3 11445.4 8143.1 10355.1 13718.9 TRUE FALSE 9419.356189 9949.016886 8218.526606 7196.928823 8379.193077 9701.137272 10681.89825 8071.905735 11431.5497 15418.5009 0.610912581 0.645264864 0.533030199 0.46677228 0.543450568 0.629188099 0.692797459 0.523520787 0.741417714 1 13.91237488 -9.000003156 0.804434042 1.005140547 0.571183778 0.781898274 0.067351198 0.768759954 0.8140342 0.074526413 0.024543934 1.00E-09 9.000003156 -0.433956769 TIQEVLEEQS(ph)EDEDR ddPTM_A459_MK2206_30min_R2 5 TIQEVLEEQSEDEDR 15 0 P18858-3;P18858;M0R0Q7;P18858-2 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 TIQEVLEEQS(1)EDEDR;TIQEVLEEQS(1)EDEDR;TIQEVLEEQS(1)EDEDR;TIQEVLEEQS(1)EDEDR;TIQEVLEEQS(1)EDEDR 260.58 2.10E-36 34184440 127972.9 125252.2 128017 128192.8 117055 116502 134300 99163.5 93233.7 132348 TRUE FALSE 137770.6036 119032.3579 132285.0229 117719.0382 112458.8325 120935.5652 116666.2487 112124.5099 101342.9987 128029.4956 1.076084874 0.929726055 1.033238648 0.919468109 0.87838222 0.944591437 0.911245086 0.875770926 0.791559775 1 16.96611669 -4.614783052 0.51905825 0.887278815 1.180978969 0.395235745 0.061225938 5.210546107 0.948182356 0.035904138 0.967228816 2.43E-05 4.614783052 0.293700154 TIQEVLEEQS(ph)EDEDREAK ddPTM_A459_MK2206_30min_R1 6 TIQEVLEEQSEDEDREAK 18 1 P18858-3;P18858;M0R0Q7;P18858-2 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK 177.32 1.13E-09 396550000 15060.8 16308.1 17099.2 14758.1 13369 12400.5 14586.6 13847.3 13968.6 13038.9 TRUE FALSE 13779.79987 15246.43973 15938.55395 15894.77142 12836.48442 13102.60559 13613.55453 13726.23452 15420.68596 14654.25737 0.94032741 1.04041026 1.087639827 1.084652126 0.875955983 0.894115973 0.928982901 0.936672133 1.052300746 1 13.83903224 TIQEVLEEQS(ph)EDEDREAK ddPTM_A459_MK2206_30min_R2 4 TIQEVLEEQSEDEDREAK 18 1 P18858-3;P18858;M0R0Q7;P18858-2 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK 90.884 0.0030677 191310700 84805.4 87137.5 82002.6 84264.4 93226.2 70504.4 93656.6 71277.1 67128.9 88186 TRUE FALSE 91298.16663 82810.37846 84736.52576 77379.72897 89565.67096 73187.49435 81359.37592 80593.2617 72967.65038 85308.49804 1.070211863 0.970716639 0.993295248 0.907057688 1.049903269 0.857915636 0.953707752 0.944727238 0.855338589 1 16.38040184 -1.52287876 0.548649735 0.93174488 6.615969156 0.309703889 0.057263432 159.6968331 1.468947964 0.02698035 1069.161575 0.029999999 1.52287876 5.684224276 TIQEVLEEQS(ph)EDEDREAKR ddPTM_A459_MK2206_30min_R1 1 TIQEVLEEQSEDEDREAKR 19 2 P18858-3;P18858;M0R0Q7;P18858-2 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 TIQEVLEEQS(1)EDEDREAKR 52.898 0.027143 49502000 3830.7 3820.2 3529.7 3009.4 3219.5 2617.6 2872 3147.2 2495.1 2210.9 TRUE FALSE 3504.878849 3571.504286 3290.113798 3241.184509 3091.260498 2765.80625 2680.41412 3119.684362 2754.474574 2484.802983 1.410525854 1.43733902 1.324094433 1.304403017 1.24406664 1.113088751 1.078722997 1.255505721 1.108528359 1 11.27891575 -1.947921615 0.173366349 0.986215317 2.759722151 0.826559366 0.058151148 21.25925616 0.265613718 0.15700646 9.540599269 0.011274009 1.947921615 1.773506834 TIQFVDWCPTGFK ddPTM_A459_MK2206_30min_R1 1 TIQFVDWCPTGFK 13 0 Q9BQE3;F5H5D3;A0A1W2PQM2;Q9NY65;Q9NY65-2;C9J2C0;V9GZ17 Q9BQE3 TUBA1C;TUBA8 Tubulin alpha-1C chain;Tubulin alpha-8 chain 0 124.6 0.030863 4838000 3376.8 3509.7 3274.6 3896.7 3294.4 3335.3 3273.3 2989.6 2438.5 3101.3 FALSE TRUE 3089.585428 3281.217892 3052.329276 4196.824509 3163.177072 3524.141804 3054.944129 2963.462242 2691.990801 3485.512458 0.8864078 0.94138751 0.87571894 1.204076749 0.907521379 1.011082831 0.876469147 0.850222823 0.772337162 1 11.76715507 -7.362833197 5.474415062 0.859768832 0.972855509 0.170534224 0.102271221 0.375596262 16.52736163 0.043425828 0.028899538 4.34E-08 7.362833197 0.113086677 TIQNSSVS(ph)PTSSSSSSSSTGETQTQSSSR ddPTM_A459_MK2206_30min_R2 2 TIQNSSVSPTSSSSSSSSTGETQTQSSSR 29 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 TIQNS(0.003)S(0.009)VS(0.845)PT(0.133)S(0.006)S(0.004)SSSSSSTGETQTQSSSR;T(0.001)IQNS(0.01)S(0.029)VS(0.665)PT(0.221)S(0.073)S(0.001)SSSSSSTGETQTQSSSR 178.02 5.31E-28 7857000 24251.7 33149.1 24096 35112 30286 40501 34598 26347.4 31716.6 30831 TRUE FALSE 26108.4288 31502.9639 24899.34861 32243.23728 29096.81947 42042.29394 30055.24104 29791.09564 34475.25254 29824.98699 0.875387768 1.056260776 0.834848599 1.081081353 0.975585319 1.40963327 1.007720173 0.998863659 1.155918443 1 14.86423389 -5.872013313 7.854713117 1.096159945 0.936030269 0.254020474 0.130896579 0.342973007 22.41968794 0.036805776 0.054829819 1.34E-06 5.872013313 -0.160129676 TIS(ph)AQDTLAYATALLNEK ddPTM_A459_MK2206_30min_R1 2 TISAQDTLAYATALLNEK 18 0 Q9UPU5;A0A0U1RQI9 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 T(0.016)IS(0.984)AQDTLAYATALLNEK;T(0.378)IS(0.622)AQDTLAYATALLNEK 266.83 8.14E-54 177747000 7357.5 7897.9 7521.9 6602.5 8276.5 7827.9 10406.8 9447.1 10950.8 9758.9 TRUE FALSE 6731.705989 7383.745274 7011.334385 7111.025694 7946.829479 8271.108933 9712.58136 9364.505001 12089.17485 10967.90621 0.613764 0.673213751 0.639259149 0.648348514 0.724553012 0.754119225 0.885545625 0.853809727 1.102231786 1 13.42100052 -7.42509924 0.810617947 1.040162567 0.639249055 0.904276204 0.048707825 0.171002328 0.212738552 0.0388072 0.020858794 3.76E-08 7.42509924 -0.400913512 TIS(ph)AQDTLAYATALLNEK ddPTM_A459_MK2206_30min_R2 2 TISAQDTLAYATALLNEK 18 0 Q9UPU5;A0A0U1RQI9 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 T(0.162)IS(0.837)AQDTLAYATALLNEK;T(0.003)IS(0.984)AQDT(0.013)LAYATALLNEK 218.14 2.99E-14 234760000 243362 321711 267359 301853 306993 352842 454240 357102 353219 416920 TRUE FALSE 261993.9818 305735.2996 276272.6156 277190.6443 294938.9123 366269.6496 394597.7424 403776.4575 383941.3501 403315.9345 0.649599878 0.758054104 0.685002976 0.687279179 0.731285047 0.908145744 0.978383715 1.001141842 0.951961768 1 18.62155088 -6.828738564 2.490976232 0.982150554 0.697929893 0.957941974 0.028252663 0.051832449 0.657007536 0.010749738 0.009546739 1.48E-07 6.828738564 -0.284220661 TIS(ph)DGTISASK ddPTM_A459_MK2206_30min_R1 2 TISDGTISASK 11 0 A0A075B6Q2;S4R347;Q5T0N5-3;Q5T0N5-4;Q5T0N5-2;Q5T0N5-5;Q5T0N5 A0A075B6Q2 FNBP1L Formin-binding protein 1-like 1 T(0.042)IS(0.815)DGT(0.142)IS(0.001)ASK;T(0.147)IS(0.845)DGT(0.008)ISASK 145.81 0.00069526 94350000 5799.4 6936.2 7504.4 6546.4 7023.8 6148.2 6655.7 6107.7 5694.1 5387.1 TRUE FALSE 5306.130576 6484.652119 6995.022236 7050.604862 6744.027173 6496.305771 6211.710397 6054.301023 6286.022072 6054.494619 0.876395292 1.071047631 1.155343704 1.164524094 1.113887714 1.072972425 1.025966788 0.999968024 1.038240591 1 12.56379082 -7.259402935 3.442441598 1.01434791 1.085798339 0.125384439 0.075450811 0.507815007 12.88979981 0.034870533 0.024223213 5.50E-08 7.259402935 0.071450429 TIS(ph)DGTISASK ddPTM_A459_MK2206_30min_R2 2 TISDGTISASK 11 0 A0A075B6Q2;S4R347;Q5T0N5-3;Q5T0N5-4;Q5T0N5-2;Q5T0N5-5;Q5T0N5 A0A075B6Q2 FNBP1L Formin-binding protein 1-like 1 T(0.027)IS(0.602)DGT(0.368)IS(0.003)ASK;T(0.112)IS(0.641)DGT(0.245)IS(0.003)ASK 140.45 0.0010849 65444000 109500 148559 121937 159493 137119 99931 144581 108397 95847 111211 TRUE FALSE 117883.4042 141181.7761 126002.3187 146461.9117 131735.0191 103733.9442 125597.341 122564.8601 104183.5988 107582.1942 1.095751998 1.312315455 1.171219082 1.361395469 1.224505785 0.964229676 1.167454726 1.139267153 0.968409313 1 16.71507979 -6.661865332 7.762747959 1.064436991 1.242754078 0.496238065 0.092398108 0.210159046 14.4752857 0.029706273 0.029658627 2.18E-07 6.661865332 0.178317087 TIS(ph)EPDEQR ddPTM_A459_MK2206_30min_R1 1 TISEPDEQR 9 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 T(0.208)IS(0.792)EPDEQR 101.3 0.017151 6871500 4892.8 4875.8 4379.2 4003.5 3884.8 3065 4000.2 3570.7 4464.9 4837.3 TRUE FALSE 4476.641667 4558.384534 4081.952105 4311.850264 3730.06019 3238.537651 3733.353957 3539.481746 4929.042333 5436.581244 0.823429554 0.838465265 0.750830701 0.793117967 0.68610401 0.595693784 0.686709862 0.651049177 0.906643737 1 12.40848399 -11.46669095 5.079329161 1.1341841 0.741120675 0.409800378 0.090385747 0.06398538 0.000707809 0.040771577 0.022478213 3.41E-12 11.46669095 -0.393063425 TIS(ph)EPDEQR ddPTM_A459_MK2206_30min_R2 1 TISEPDEQR 9 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 T(0.009)IS(0.991)EPDEQR 157.97 0.00086623 22882000 226580 241800 222450 254850 235720 229010 269000 195060 176140 247100 TRUE FALSE 243927.139 229792.5636 229866.372 234027.9398 226464.4484 237725.136 233679.9769 220555.0117 191460.3388 239037.1472 1.020457037 0.961325745 0.961634518 0.97904423 0.947402741 0.994511266 0.977588545 0.922680907 0.800964792 1 17.86687531 -7.898923435 4.423063466 0.889252853 0.975541369 0.297053535 0.048778326 0.217177404 7.373874428 0.02661348 0.012050131 1.26E-08 7.898923435 0.086288517 TIS(ph)NPEVVMK ddPTM_A459_MK2206_30min_R1 2 TISNPEVVMK 10 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6;F8W9I4;E9PFY5 A8MQ02 MLLT4 Afadin 1 T(0.148)IS(0.852)NPEVVMK;T(0.02)IS(0.98)NPEVVMK 146.67 0.00085391 70453000 8624.9 9831.8 10293 9283 8967.4 7750.8 7995.2 8211.9 7799.6 7172.2 TRUE FALSE 7891.306964 9191.748033 9594.339838 9997.978268 8610.209469 8189.643598 7461.854796 8140.104224 8610.396331 8060.746283 0.978979698 1.140309806 1.190254537 1.240329111 1.0681653 1.015990742 0.925702725 1.009844987 1.068188481 1 12.9766977 -6.572565188 3.834885705 1.000502536 1.142968454 0.440367179 0.070406781 0.212377281 6.538080187 0.025187973 0.025775724 2.68E-07 6.572565188 0.142465918 TIS(ph)NPEVVMK ddPTM_A459_MK2206_30min_R2 3 TISNPEVVMK 10 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6;F8W9I4;E9PFY5 A8MQ02 MLLT4 Afadin 1 T(0.016)IS(0.984)NPEVVMK;T(0.018)IS(0.982)NPEVVMK;T(0.03)IS(0.97)NPEVVMK 142.39 0.0012043 59929000 146365 204763 171648 167826 167714 147357 201657 162033 150780 135708 TRUE FALSE 157570.8169 194594.7672 177370.6586 154114.079 161128.7057 152964.7739 175179.1937 183211.2694 163894.5719 131279.8591 1.2002665 1.48228958 1.351088125 1.173935439 1.227368058 1.16518082 1.334395047 1.395577895 1.248436531 1 17.00228607 -8.557623545 21.53309337 0.999999997 1.292767996 0.443152312 0.09739389 2248.039117 1393221.268 0.099712044 0.025745539 2.77E-09 8.557623545 0.292767999 TIS(ph)PPTLGTLR ddPTM_A459_MK2206_30min_R1 1 TISPPTLGTLR 11 0 Q9UQ84;Q9UQ84-4 Q9UQ84 EXO1 Exonuclease 1 1 T(0.388)IS(0.6)PPT(0.012)LGTLR 108.98 0.0096569 14819000 2991.2 3265.9 3001.4 3090.3 3081.4 2739.4 3050.9 2901.5 2227.5 2253.2 TRUE FALSE 2736.782733 3053.289316 2797.67333 3328.315441 2958.661313 2894.502461 2847.380028 2876.132491 2459.056596 2532.343427 1.080731272 1.20571692 1.10477643 1.314322302 1.168349159 1.143013396 1.124405165 1.135759258 0.971059679 1 11.30625736 -8.170122693 2.9477578 0.981681411 1.166869881 0.561134573 0.061566484 0.195445502 3.058535563 0.052557926 0.016299437 6.76E-09 8.170122693 0.18518847 TIS(ph)PSTSNNIPLMR ddPTM_A459_MK2206_30min_R1 1 TISPSTSNNIPLMR 14 0 O94806;O94806-2;Q15139;F8WBA3 O94806;Q15139 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 T(0.395)IS(0.569)PS(0.034)T(0.002)S(0.001)NNIPLMR 131.86 0.00085516 37074000 1668.1 1232.5 1594.5 1152.6 1422.5 1314.4 1289.6 1325.3 1222.6 1158.1 TRUE FALSE 1526.219335 1152.264026 1486.269783 1241.373452 1365.838813 1388.820192 1203.573137 1313.713042 1349.693645 1301.574171 1.172594977 0.885284951 1.141901718 0.953747761 1.049374552 1.067031156 0.924705763 1.0093263 1.036970213 1 10.34604181 -7.211175215 24.99765817 0.993527295 1.038187007 0.08532742 0.081977816 1062.572809 528444.4493 0.029136224 0.022568814 6.15E-08 7.211175215 0.044659712 TIS(ph)PSTSNNIPLMR ddPTM_A459_MK2206_30min_R2 1 TISPSTSNNIPLMR 14 0 O94806;O94806-2;Q15139;F8WBA3 O94806;Q15139 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 T(0.033)IS(0.815)PS(0.11)T(0.033)S(0.008)NNIPLMR 93.478 0.02268 0 8854.8 9650.2 9086.7 10278 9820.3 9773.2 14570 7308.9 9829.9 12430 TRUE FALSE 9532.730296 9170.985101 9389.646043 9438.254522 9434.705679 10145.12597 12656.9415 8264.198325 10684.88693 12024.41012 0.792781534 0.762697297 0.780882052 0.784924535 0.784629399 0.843710908 1.052603943 0.687285134 0.888599676 1 13.5536785 -6.894038903 4.499847785 0.889158809 0.780758457 0.2942461 0.08979534 0.318224807 11.16603557 0.032122352 0.028200356 1.28E-07 6.894038903 -0.108400352 TIS(ph)VLASPSVPLLQHR ddPTM_A459_MK2206_30min_R2 1 TISVLASPSVPLLQHR 16 0 A0A1B0GTU4;A0A1B0GV30 A0A1B0GTU4 1 T(0.443)IS(0.557)VLASPSVPLLQHR 85.203 0.010908 2480900 15264 16452 16570 15529 15742 12457 13588 13989 13055 18831 TRUE FALSE 16432.62358 15635.0176 17122.43553 14260.23103 15123.88998 12931.05986 11803.87928 15817.41033 14190.5003 18216.54601 0.902071313 0.858286614 0.939938643 0.782817501 0.830228188 0.709852453 0.647975707 0.86829909 0.778989623 1 14.15296182 -5.774572837 24.93881203 0.787951777 0.895917629 0.182635177 0.090773751 317.1257304 602182.1096 0.025102385 0.037488653 1.68E-06 5.774572837 0.107965852 TIS(ph)VSGSTAK ddPTM_A459_MK2206_30min_R1 1 TISVSGSTAK 10 0 Q8TDJ6-3;Q8TDJ6 Q8TDJ6-3 DMXL2 DmX-like protein 2 1 T(0.135)IS(0.858)VS(0.003)GS(0.003)TAK 110.08 0.0067049 0 6816.8 6330.3 6199.5 5211.3 5541.4 3676.2 4107.9 4241.7 4547.2 4005.1 TRUE FALSE 6236.995364 5918.196319 5778.695213 5612.675229 5320.674304 3884.343267 3833.869486 4204.615264 5019.897712 4501.282025 1.385604219 1.314780164 1.283788747 1.246905925 1.182035312 0.862941545 0.851728344 0.93409283 1.115215106 1 12.13612024 -6.56269024 3.18039449 0.942956506 1.303243933 0.821280168 0.078208765 0.106725236 2.223709423 0.028917652 0.029979758 2.74E-07 6.56269024 0.360287427 TISET(ph)IER ddPTM_A459_MK2206_30min_R1 1 TISETIER 8 0 P26639;P26639-2 P26639 TARS "Threonine--tRNA ligase, cytoplasmic" 1 TIS(0.004)ET(0.996)IER 120.31 0.017424 3148900 1636.7 1380.7 1286.5 1287.7 2286.4 1808.5 1967.1 1402.2 1125.5 1231 TRUE FALSE 1497.49007 1290.816179 1199.175964 1386.878877 2195.327846 1910.895707 1835.878348 1389.940713 1242.499753 1383.505574 1.082388173 0.93300396 0.866766269 1.002438229 1.586786413 1.381198416 1.326975751 1.004651329 0.898080771 1 10.43411274 -6.026483279 24.84048231 1.222505839 0.954056881 0.237641857 0.198884512 945.4863052 886835.4692 0.063702179 0.082526894 9.41E-07 6.026483279 -0.268448958 TISGPLIPPAS(ph)PR ddPTM_A459_MK2206_30min_R2 1 TISGPLIPPASPR 13 0 A0A0A0MSG0;A6NGB9 A0A0A0MSG0 WIPF3 WAS/WASL-interacting protein family member 3 1 TISGPLIPPAS(1)PR 99.069 0.012043 3544800 13813 18967 16504 19323 17242 17793 15294 13088 9824.9 16300 TRUE FALSE 14870.5339 18025.12636 17054.23512 17744.24909 16564.99245 18470.12508 13285.87943 14798.64654 10679.45204 15768.13233 0.943075158 1.143136421 1.081563419 1.125323451 1.050536113 1.171357818 0.842577875 0.93851613 0.677280721 1 13.94472417 -7.27180812 24.86422806 0.859470007 1.088433479 0.556988188 0.096600951 468.0822819 1122455.99 0.037556532 0.025640151 5.35E-08 7.27180812 0.228963472 TISINS(ph)PK ddPTM_A459_MK2206_30min_R1 2 TISINSPK 8 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 T(0.001)IS(0.129)INS(0.871)PK;TIS(0.005)INS(0.995)PK 103.26 0.015562 82546000 11179 13064.8 12486.7 11549 9121.1 8110.3 9019.3 9856 9884.8 8795.4 TRUE FALSE 10228.16735 12214.27915 11639.13759 12438.50598 8757.787273 8569.498177 8417.638954 9769.830031 10912.36033 9885.040554 1.034711723 1.235632679 1.177449655 1.258316131 0.885963717 0.866915834 0.851553305 0.988344962 1.103926714 1 13.27103117 -6.264856123 24.99673552 0.93984638 1.18081521 0.608313364 0.08903916 202.6122612 1482300.859 0.028512452 0.03364087 5.43E-07 6.264856123 0.24096883 TISINS(ph)PK ddPTM_A459_MK2206_30min_R2 4 TISINSPK 8 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 TIS(0.011)INS(0.988)PK;T(0.001)IS(0.001)INS(0.998)PK;T(0.116)IS(0.003)INS(0.881)PK;TISINS(1)PK 122.69 0.006279 216606000 1303870 1221970 1248080 1053500 1100260 797000 1416320 1030370 863880 1222890 TRUE FALSE 1403695.29 1161288.747 1289690.364 967425.68 1057058.264 827330.3935 1230355.483 1165042.897 939018.7209 1182987.199 1.186568452 0.981657914 1.090198072 0.817782036 0.893550044 0.699357012 1.040041248 0.984831364 0.793769131 1 20.17400303 -5.750873725 24.99793753 0.887740507 1.075693188 0.410075564 0.107618594 220.3221833 521268.9065 0.02926596 0.050019172 1.77E-06 5.750873725 0.187952681 TISQEFLT(ph)PGK ddPTM_A459_MK2206_30min_R2 1 TISQEFLTPGK 11 0 E7EUA0;Q0ZGT2-2;Q0ZGT2;E7ETM8;Q0ZGT2-4;Q0ZGT2-3;H7BXY5 E7EUA0 NEXN Nexilin 1 T(0.001)IS(0.421)QEFLT(0.579)PGK 129.74 0.0059097 4782400 44860 38068 40349 40522 44310 32658 47760 41545 31307 42979 TRUE FALSE 48294.51609 36177.59848 41694.21552 37211.22298 42570.16676 33900.82307 41489.05463 46975.07415 34030.02627 41576.59875 1.161579291 0.870143291 1.002828918 0.895004019 1.023897289 0.815382309 0.99789439 1.129844084 0.818489903 1 15.34348412 -10.82702202 16.50955422 1 0.967064258 0.00680822 0.113780963 0 0 0.102986331 0.024977854 1.49E-11 10.82702202 -0.032935742 TIT(ph)LVKSPISVPGGSALISNLGK ddPTM_A459_MK2206_30min_R2 1 TITLVKSPISVPGGSALISNLGK 23 1 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 T(0.315)IT(0.473)LVKS(0.201)PIS(0.01)VPGGSALISNLGK 70.15 0.003513 36361000 120140 244750 153620 217770 238500 185360 227400 169060 201030 199940 TRUE FALSE 129338.0108 232596.0709 158741.6141 199977.4944 229135.2916 192414.0047 197542.1068 191156.7225 218515.226 193415.9742 0.668703872 1.202569084 0.820726493 1.033924397 1.18467615 0.994819614 1.021332947 0.988319208 1.129768247 1 17.56134743 -4.744525084 24.9555485 1.036631465 0.668702763 0.531065901 0.105074989 806.5909212 1189988.654 0.025204962 0.714494407 1.80E-05 4.744525084 -0.367928702 TIT(ph)PETLCHVGVPSR ddPTM_A459_MK2206_30min_R1 2 TITPETLCHVGVPSR 15 0 Q9Y2G1-2;Q9Y2G1 Q9Y2G1-2 MYRF "Myelin regulatory factor;Myelin regulatory factor, N-terminal;Myelin regulatory factor, C-terminal" 1 T(0.045)IT(0.953)PET(0.002)LCHVGVPSR;T(0.104)IT(0.895)PETLCHVGVPSR 156.83 0.00021687 11282200 4047 3633.4 3939.8 3454 4849.7 4058.8 4614.1 4217.4 3613.1 3526.6 TRUE FALSE 3702.781398 3396.865 3672.377353 3720.027678 4656.52618 4288.605748 4306.301808 4180.527716 3988.694675 3963.501832 0.934219676 0.857036314 0.92654867 0.93857095 1.174851527 1.082024414 1.086489168 1.054756095 1.006356208 1 11.95255993 -6.091693665 6.438779608 1.071608157 0.905895121 0.701023962 0.049327357 0.129738364 7.59946946 0.014792037 0.019265266 8.10E-07 6.091693665 -0.165713036 TIT(ph)PPAAPKPK ddPTM_A459_MK2206_30min_R2 1 TITPPAAPKPK 11 1 Q96BD5-2;Q96BD5;Q96BD5-3 Q96BD5-2 PHF21A PHD finger protein 21A 1 T(0.336)IT(0.664)PPAAPKPK 89.663 0.040032 14704000 76323 100330 98382 103990 100710 82348 100780 85035 76205 91502 TRUE FALSE 82166.34756 95347.75809 101662.0068 95493.68435 96755.61937 85481.81084 87547.46494 96149.36647 82833.17315 88516.29723 0.928262367 1.077177436 1.148511743 1.078826017 1.093082544 0.965718331 0.989054758 1.08623349 0.935795732 1 16.43365548 -6.755103351 24.99856398 1.000355947 1.071227532 0.229580022 0.063129437 239.2259882 943855.5148 0.02148423 0.020972875 1.76E-07 6.755103351 0.070871585 TITLVKS(ph)PISVPGGSALISNLGK ddPTM_A459_MK2206_30min_R2 1 TITLVKSPISVPGGSALISNLGK 23 1 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 T(0.007)IT(0.141)LVKS(0.628)PIS(0.209)VPGGS(0.013)ALIS(0.002)NLGK 46.808 0.037493 38927000 42175 97112 72796 73967 90636 74197 65855 47941 63165 78427 TRUE FALSE 45403.95043 92289.55929 75222.98231 67923.65949 87077.17523 77020.61883 57208.15939 54207.05331 68658.97752 75867.93341 0.598460356 1.216450154 0.991499029 0.89528812 1.147746766 1.015193315 0.754049265 0.714492288 0.9049802 1 16.21120262 -7.252424833 24.58087096 0.819588128 0.992949884 0.117975819 0.171683391 859.0433273 2342443.131 0.063612046 0.04852646 5.59E-08 7.252424833 0.173361756 TIVMGAS(ph)FR ddPTM_A459_MK2206_30min_R2 1 TIVMGASFR 9 0 P37837;F2Z393 P37837 TALDO1 Transaldolase 1 TIVMGAS(1)FR 102.95 0.01567 8025700 17137 22763 23061 25928 25451 21963 27804 25328 20249 19466 TRUE FALSE 18449.0219 21632.62252 23829.84223 23809.59946 24451.66586 22798.81736 24153.3014 28638.45656 22010.22142 18830.82601 0.979724516 1.148787764 1.265469832 1.264394851 1.298491412 1.210717859 1.282646942 1.520828483 1.168839933 1 14.20080866 -4.811577514 1.703564167 1.273889924 0.886627291 0.303520466 0.123267689 0.968552161 2.950421015 0.032823024 0.609392889 1.54E-05 4.811577514 -0.387262634 TIYLS(ph)SPDSAVGVQWPR ddPTM_A459_MK2206_30min_R1 1 TIYLSSPDSAVGVQWPR 17 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 TIYLS(0.494)S(0.494)PDS(0.012)AVGVQWPR 226.39 3.54E-16 23863000 1725.6 1684.3 1726.5 1456.4 1806.6 1795.3 1384.3 1578.3 1264 1199.8 TRUE FALSE 1578.828659 1574.651764 1609.30999 1568.57218 1734.639296 1896.948335 1291.955873 1564.501089 1395.397323 1348.440282 1.170855454 1.167757879 1.193460335 1.163249275 1.28640424 1.406772224 0.958111301 1.160230164 1.034823226 1 10.39707592 -7.28046141 24.99997238 1.051643691 1.22619865 0.554430666 0.084399945 744.4016398 978336.2583 0.036896126 0.024917596 5.24E-08 7.28046141 0.174554958 TIYLSS(ph)PDSAVGVQWPR ddPTM_A459_MK2206_30min_R2 2 TIYLSSPDSAVGVQWPR 17 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 TIYLS(0.029)S(0.971)PDSAVGVQWPR;TIYLS(0.018)S(0.981)PDSAVGVQWPR 188.63 6.39E-08 19246000 39817 51375 49412 54805 56604 49829 54930 40034 49488 51674 TRUE FALSE 42865.42013 48823.79221 51059.37142 50327.25619 54381.44255 51725.27751 47717.62502 45266.58126 53792.37679 49987.88161 0.857516237 0.976712568 1.021434991 1.006789137 1.087892521 1.034756342 0.954583861 0.905551102 1.07610835 1 15.60929077 -4.768894569 2.920405616 1.008798972 0.828800138 0.454542426 0.050329754 0.417468949 4.918413933 0.013684287 0.182721072 1.70E-05 4.768894569 -0.179998834 TKADVTPPPDGS(ph)TTHNLEVSPK ddPTM_A459_MK2206_30min_R2 1 TKADVTPPPDGSTTHNLEVSPK 22 1 O75362 O75362 ZNF217 Zinc finger protein 217 1 TKADVTPPPDGS(0.272)T(0.272)T(0.272)HNLEVS(0.183)PK 48.097 0.029129 13502000 59560 74183 70083 58243 88891 51452 105360 62512 70435 82438 TRUE FALSE 64119.95939 70499.18009 72419.53224 53484.36059 85400.6927 53410.04191 91526.10544 70682.53304 76561.30898 79748.05481 0.804031641 0.884023821 0.908104059 0.670666648 1.070881201 0.669734729 1.147690758 0.886322973 0.96003983 1 16.28316171 -7.265048652 24.99922902 0.989040292 0.84345464 0.290085628 0.124827363 455.1663179 3152638.41 0.047685164 0.03356065 5.43E-08 7.265048652 -0.145585652 TKADVTPPPDGSTTHNLEVS(ph)PK ddPTM_A459_MK2206_30min_R2 1 TKADVTPPPDGSTTHNLEVSPK 22 1 O75362 O75362 ZNF217 Zinc finger protein 217 1 TKADVTPPPDGS(0.006)T(0.006)T(0.029)HNLEVS(0.96)PK 78.3 0.00062238 10017000 83479 96415 91826 82876 120960 71444 138300 86897 87373 124860 TRUE FALSE 89870.21642 91627.1713 94887.43301 76104.76569 116210.5026 74162.85148 120141.0439 98254.73626 94972.54561 120785.8284 0.744046033 0.758592067 0.785584155 0.630080256 0.962120343 0.614002921 0.994661753 0.813462453 0.786288813 1 16.88209167 -14.52287875 0.103346506 1.698287848 0.649932 0.285912506 0.110914803 225.6758645 1.569108449 33.4405501 1.595152041 3.00E-15 14.52287875 -1.048355848 TKDGVVEITGK ddPTM_A459_MK2206_30min_R2 1 TKDGVVEITGK 11 1 P04792 P04792 HSPB1 Heat shock protein beta-1 0 122.46 0.011682 8882400 85864 93896 98119 97291 85583 80442 101340 87539 73190 84556 FALSE TRUE 92437.81386 89233.26118 101390.2385 89342.01408 82222.5814 83503.27668 88033.93627 98980.64787 79555.9339 81796.94464 1.130088835 1.090911911 1.239535767 1.092241458 1.005203578 1.020860584 1.076249689 1.210077568 0.972602757 1 16.31975933 -1.522878783 0.078365712 0.928424917 1.500654168 0.211153212 0.075388453 377.0342755 2.167079604 2.447508281 23.42106752 0.029999997 1.522878783 0.572229251 TKDQPDGSSLS(ph)PAQS(ph)PSQSQPPAASSLR ddPTM_A459_MK2206_30min_R1 1 TKDQPDGSSLSPAQSPSQSQPPAASSLR 28 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 2 TKDQPDGS(0.001)S(0.011)LS(0.973)PAQS(0.842)PS(0.167)QS(0.006)QPPAASSLR 117.05 8.22E-12 5337300 601.08 604.85 762.62 299.39 374.84 686.63 537.64 534.81 665.58 781.71 TRUE FALSE 549.9549896 565.4741551 710.8554792 322.4490697 359.9093291 725.5063972 501.7750166 530.1342126 734.7694228 878.5541364 0.625977349 0.643641788 0.809119723 0.367022425 0.409660958 0.825795893 0.571137276 0.603416671 0.836339381 1 9.778987377 -8.450189633 2.667526049 0.997953047 0.605379252 0.469842149 0.137497203 0.232560594 3.499549396 0.136554684 0.037040585 3.55E-09 8.450189633 -0.392573796 TKDQPDGSSLS(ph)PAQS(ph)PSQSQPPAASSLR ddPTM_A459_MK2206_30min_R2 2 TKDQPDGSSLSPAQSPSQSQPPAASSLR 28 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 2 TKDQPDGSS(0.001)LS(0.999)PAQS(0.956)PS(0.04)QS(0.004)QPPAASSLR;TKDQPDGS(0.011)S(0.027)LS(0.966)PAQS(0.935)PS(0.055)QS(0.006)QPPAASSLR 126.72 6.95E-12 45759000 148585 135965 135324 160795 147234 117267 164493 122201 109346 157837 TRUE FALSE 159960.7818 129213.1758 139835.6346 147657.5341 141452.8534 121729.6779 142894.8715 138173.0903 118856.7174 152686.7916 1.047639944 0.846262957 0.915833211 0.967061607 0.926424951 0.797250873 0.935869239 0.904944618 0.778434835 1 17.22021574 -6.549745536 24.99293027 0.878554899 0.936623546 0.12444186 0.075639292 472.3846679 439434.298 0.023917035 0.023917561 2.82E-07 6.549745536 0.058068647 TKDQPDGSSLS(ph)PAQSPSQSQPPAASSLR ddPTM_A459_MK2206_30min_R1 3 TKDQPDGSSLSPAQSPSQSQPPAASSLR 28 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 TKDQPDGS(0.001)S(0.013)LS(0.986)PAQSPSQSQPPAASSLR;TKDQPDGSSLS(1)PAQSPSQSQPPAASSLR;TKDQPDGS(0.003)S(0.054)LS(0.938)PAQS(0.004)PSQSQPPAASSLR 151.07 1.44E-14 39392100 4368.34 4786 4247.45 3447.95 3622.52 3566.79 4777.11 3357.86 4661.49 4793.82 TRUE FALSE 3996.789744 4474.43053 3959.144928 3713.511706 3478.227358 3768.738567 4458.437708 3328.502584 5146.068567 5387.714613 0.741833974 0.830487665 0.734846816 0.689255459 0.645584929 0.699505976 0.827519278 0.617794895 0.955148692 1 12.39545772 -8.373182481 5.765487064 0.994726302 0.726674873 0.710511204 0.065041804 0.126315137 5.35188274 0.06380311 0.016583852 4.23E-09 8.373182481 -0.26805143 TKDQPDGSSLS(ph)PAQSPSQSQPPAASSLR ddPTM_A459_MK2206_30min_R2 4 TKDQPDGSSLSPAQSPSQSQPPAASSLR 28 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 TKDQPDGS(0.003)S(0.022)LS(0.967)PAQS(0.007)PS(0.001)QSQPPAASSLR;TKDQPDGSS(0.003)LS(0.997)PAQSPSQSQPPAASSLR;TKDQPDGS(0.006)S(0.059)LS(0.935)PAQSPSQSQPPAASSLR;TKDQPDGSS(0.002)LS(0.997)PAQS(0.001)PSQSQPPAASSLR 126.72 1.94E-12 119828000 210856 178530 194257 217217 186018 155994 225022 184842 142680 237020 TRUE FALSE 226999.2975 169664.4598 200733.4314 199469.6763 178713.9987 161930.461 195476.3411 209001.4841 155090.0485 229286.0568 0.99002661 0.739968501 0.875471602 0.869959905 0.779436836 0.706237716 0.852543516 0.911531591 0.676404185 1 17.8067891 -4.74355638 24.64701749 0.819682592 0.990027243 0.218012705 0.094362694 1445.320422 1991868.252 0.022264855 0.683717786 1.80E-05 4.74355638 0.170344651 TKDQPDGSSLS(ph)PAQSPSQSQPPAASSLREPGLESK ddPTM_A459_MK2206_30min_R1 1 TKDQPDGSSLSPAQSPSQSQPPAASSLREPGLESK 35 2 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 TKDQPDGSS(0.001)LS(0.784)PAQS(0.193)PS(0.018)QS(0.004)QPPAAS(0.001)S(0.001)LREPGLESK 92.873 8.01E-10 11959000 1766.2 1834 1773.2 1498.7 1526 1486.9 1332.2 1795.1 1315.9 1441.1 TRUE FALSE 1615.975415 1714.606267 1652.840124 1614.130134 1465.216189 1571.086993 1243.331369 1779.40563 1452.692514 1619.634348 0.99774089 1.058637877 1.020502021 0.99660157 0.904658629 0.970025732 0.767661769 1.098646514 0.89692622 1 10.66145243 -6.045673753 3.824044318 0.937628263 1.027449441 0.192376612 0.080315577 0.364829819 11.06249452 0.023310819 0.032388755 9.00E-07 6.045673753 0.089821178 TKDQPDGSSLS(ph)PAQSPSQSQPPAASSLREPGLESK ddPTM_A459_MK2206_30min_R2 2 TKDQPDGSSLSPAQSPSQSQPPAASSLREPGLESK 35 2 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 T(0.047)KDQPDGS(0.014)S(0.029)LS(0.901)PAQS(0.004)PS(0.002)QS(0.002)QPPAAS(0.001)S(0.001)LREPGLESK;TKDQPDGS(0.001)S(0.004)LS(0.989)PAQS(0.003)PS(0.003)QS(0.001)QPPAASSLREPGLESK 99.987 5.47E-12 31558000 30987.9 40477 37338 38405 44488 28489 42038 32255.8 34312 43634 TRUE FALSE 33360.35745 38466.97104 38582.83028 35267.18865 42741.17759 29573.16886 36518.3601 36471.74381 37296.39574 42210.22615 0.790338278 0.911318762 0.914063577 0.835512904 1.012578739 0.700616214 0.865154334 0.86404995 0.883586731 1 15.36530494 -8.849010414 2.304438351 0.999985742 0.864070854 0.221351032 0.077305917 3.21122172 20.7994411 0.072052161 0.019585435 1.42E-09 8.849010414 -0.135914888 TKDQPDGSSLSPAQS(ph)PSQSQPPAASSLREPGLESK ddPTM_A459_MK2206_30min_R1 1 TKDQPDGSSLSPAQSPSQSQPPAASSLREPGLESK 35 2 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 TKDQPDGSS(0.002)LS(0.133)PAQS(0.633)PS(0.166)QS(0.06)QPPAAS(0.003)S(0.003)LREPGLESK 82.226 5.54E-07 12472000 1316.7 1301.4 1204.8 1191.4 994.62 1133.4 1078 1294.6 1272.5 927.66 TRUE FALSE 1204.707751 1216.678623 1123.021533 1283.161834 955.0021793 1197.572129 1006.088587 1283.281449 1404.780929 1042.585524 1.15550017 1.16698208 1.077150513 1.230749713 0.915994091 1.14865601 0.964993819 1.230864441 1.347401145 1 10.02595002 -10.68913602 4.22621612 0.999961566 1.130890194 0.102492702 0.120688674 86551602.88 2.599533174 33019.59838 0.029263628 2.05E-11 10.68913602 0.130928629 TKDS(ph)GSISLQETR ddPTM_A459_MK2206_30min_R1 1 TKDSGSISLQETR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 TKDS(0.479)GS(0.479)IS(0.042)LQETR 159.41 0.0017293 33852000 2243.9 2755.3 2472.2 2629.8 2283.6 2291.2 2012.3 2316.2 1714.6 1652.2 TRUE FALSE 2053.044522 2575.929469 2304.393952 2832.347652 2192.639376 2420.925764 1878.063139 2295.949708 1892.838806 1856.887009 1.105637829 1.387230055 1.240998478 1.525320408 1.180814646 1.303755022 1.011404102 1.23645095 1.019361327 1 10.85867032 -7.24912641 24.12751371 1.086508344 1.298437878 0.434774962 0.124020253 464.6357717 910464.3313 0.045663485 0.035081265 5.63E-08 7.24912641 0.211929534 TKDS(ph)GSISLQETR ddPTM_A459_MK2206_30min_R2 2 TKDSGSISLQETR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 T(0.02)KDS(0.633)GS(0.317)IS(0.026)LQET(0.004)R;T(0.073)KDS(0.68)GS(0.226)IS(0.02)LQET(0.001)R 115.04 0.019377 27237400 67421 105656 106530 106017 111640 88910 92839 82659.5 96599 95432 TRUE FALSE 72582.8036 100409.2767 110081.657 97355.07197 107256.4527 92293.53235 80649.12778 93463.38046 105001.0064 92318.06166 0.786225385 1.087644984 1.192417335 1.054561483 1.161814392 0.999734296 0.873600749 1.012406227 1.137383135 1 16.49432531 -6.945292301 24.9996609 0.996849678 1.067208269 0.040436869 0.118045962 266.5831659 121818.5994 0.042769684 0.037719311 1.13E-07 6.945292301 0.070358591 TKDSGS(ph)ISLQETR ddPTM_A459_MK2206_30min_R1 1 TKDSGSISLQETR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 T(0.055)KDS(0.033)GS(0.819)IS(0.059)LQET(0.034)R 64.327 0.043587 31932000 4501.7 5201.8 4613.2 4076.4 4587.5 4689.8 3750.6 4619 3047.6 2569.4 TRUE FALSE 4118.806776 4863.161875 4300.068837 4390.365034 4404.770161 4955.332423 3500.404317 4578.61657 3364.408926 2887.71667 1.426319562 1.684085535 1.489089592 1.520358656 1.52534707 1.716003677 1.212170278 1.585549101 1.16507584 1 11.49571348 -8.455361727 0.937774684 0.991779915 1.546531876 0.615337665 0.137819732 0.362225674 0.704826381 0.122705758 0.042352704 3.50E-09 8.455361727 0.55475196 TKDSGS(ph)ISLQETR ddPTM_A459_MK2206_30min_R2 2 TKDSGSISLQETR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 TKDS(0.232)GS(0.761)IS(0.007)LQETR;T(0.001)KDS(0.257)GS(0.72)IS(0.022)LQETR 132.23 0.0068568 36321000 116746 163056 159651 179229 190898 152819 161273 109561 155736 175943 TRUE FALSE 125684.1635 154958.8761 164973.6847 164585.4174 183402.3853 158634.6341 140097.6614 123880.9989 169281.6358 170201.9943 0.738441192 0.910441013 0.969281737 0.967000522 1.077557205 0.932037458 0.823125851 0.727846929 0.994592551 1 17.37688842 -10.27843938 15.68644138 0.999981035 0.90671365 0.067729998 0.106023831 0 0 0.1092723 0.026502425 5.27E-11 10.27843938 -0.093267385 TKETDS(ph)PSTPGKDQR ddPTM_A459_MK2206_30min_R1 1 TKETDSPSTPGKDQR 15 2 Q7Z5J4-3;Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 T(0.007)KET(0.016)DS(0.671)PS(0.079)T(0.227)PGKDQR 85.176 0.023725 4410200 1658.9 1904.5 1576.8 1365.9 1184.7 1163.9 1169.6 1307.3 1107 924.56 TRUE FALSE 1517.801844 1780.516704 1469.771209 1471.101855 1137.51089 1229.799012 1091.578118 1295.870414 1222.076611 1039.101473 1.460686837 1.713515716 1.414463599 1.415744172 1.094706263 1.183521575 1.050501945 1.247106705 1.176089769 1 10.02112083 -5.973014797 1.699810023 1.133250405 1.573452843 0.779867415 0.09880622 0.157673273 0.921064656 0.031260661 0.053460891 1.06E-06 5.973014797 0.440202438 TKETDSPST(ph)PGKDQR ddPTM_A459_MK2206_30min_R2 1 TKETDSPSTPGKDQR 15 2 Q7Z5J4-3;Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 T(0.018)KET(0.028)DS(0.181)PS(0.119)T(0.655)PGKDQR 95.073 0.035919 3112800 12719 17253 19506 16312 15637 11823 17552 12922 13633 16040 TRUE FALSE 13692.77642 16396.24111 20156.3203 14979.25742 15023.01281 12272.93255 15247.40132 14610.94977 14818.7737 15516.61611 0.882458928 1.056689228 1.299015208 0.965368822 0.968188728 0.790954191 0.982649903 0.941632484 0.955026121 1 13.92152635 -5.976117864 24.96798141 0.934733944 1.08629698 0.251324351 0.107927019 296.2791417 309747.7681 0.030990612 0.04596414 1.06E-06 5.976117864 0.151563036 TKEVYELLDS(ph)PGK ddPTM_A459_MK2206_30min_R1 2 TKEVYELLDSPGK 13 1 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK 124.29 0.0012588 88856000 16620.1 18840.2 19173.3 14963.5 11358.2 10887.9 13886.1 14009.3 16609.6 16996.6 TRUE FALSE 15206.47322 17613.69956 17871.86982 16115.99136 10905.77884 11504.36349 12959.78361 13886.81817 18336.22736 19102.26713 0.79605594 0.922073775 0.935588938 0.84366904 0.570915419 0.60225121 0.678442172 0.726972253 0.959897966 1 14.22145625 -6.017098846 23.83189881 0.728985766 0.888540679 0.141631068 0.135006364 601.9482493 838981.1473 0.039949644 0.052930622 9.61E-07 6.017098846 0.159554913 TKEVYELLDS(ph)PGK ddPTM_A459_MK2206_30min_R2 2 TKEVYELLDSPGK 13 1 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK 98.169 0.0070254 22199000 126778 112940 113385 109057 113237 83190 143189 99405 75748 136955 TRUE FALSE 136484.2212 107331.5638 117165.1993 100146.6942 108790.7464 86355.85374 124388.1123 112397.5748 82336.42412 132486.1696 1.030177124 0.810134101 0.884357965 0.755903009 0.821147949 0.651810329 0.938876207 0.848372137 0.621471844 1 17.01548224 TKEVYELLDS(ph)PGKVLLQSK ddPTM_A459_MK2206_30min_R1 2 TKEVYELLDSPGKVLLQSK 19 2 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 T(0.002)KEVYELLDS(0.951)PGKVLLQS(0.047)K;T(0.008)KEVY(0.001)ELLDS(0.69)PGKVLLQS(0.301)K 70.986 0.0059089 22401700 12418.5 12493.9 13376.5 14500.1 11001.2 8895 8203.5 12308.1 7183.7 3938.9 TRUE FALSE 11362.24136 11680.54484 12468.54045 15616.90021 10562.99891 9398.627213 7656.259483 12200.49158 7930.471322 4426.880669 2.56664731 2.63854974 2.816552191 3.52774366 2.386104279 2.12308122 1.72949308 2.75600191 1.791435531 1 12.11207477 -6.577170083 3.633114409 1.983140013 2.8746652 0.48800019 0.478365231 0.222396742 6.055150586 0.160388151 0.16405543 2.65E-07 6.577170083 0.891525187 TKEYVSNDAAQS(ph)DDEEK ddPTM_A459_MK2206_30min_R2 1 TKEYVSNDAAQSDDEEK 17 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 T(0.001)KEYVSNDAAQS(0.999)DDEEK 125.73 0.00067305 4103500 18962 16721 17312 12858 12958 6848.6 16826 12789 7986.8 18953 TRUE FALSE 20413.7453 15890.65945 17889.17344 11807.46027 12449.20381 7109.228272 14616.72599 14460.56621 8681.477427 18334.56516 1.113402206 0.866705008 0.975707538 0.644000017 0.679001858 0.387750034 0.797222397 0.788705163 0.473503317 1 14.16227843 -5.759294846 24.78309884 0.665134471 0.973415013 0.397663577 0.170336186 48.86643237 564701.4905 0.045368097 0.073898419 1.74E-06 5.759294846 0.308280542 TKEYVSNDAAQS(ph)DDEEKLQSQPTDTDGGR ddPTM_A459_MK2206_30min_R1 2 TKEYVSNDAAQSDDEEKLQSQPTDTDGGR 29 2 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 TKEYVSNDAAQS(0.998)DDEEKLQS(0.002)QPTDTDGGR;T(0.006)KEY(0.006)VS(0.006)NDAAQS(0.966)DDEEKLQS(0.011)QPT(0.003)DT(0.001)DGGR 87.739 1.31E-06 32662000 2416.79 2867.99 3213.17 2514.67 2253.38 1539.5 1715.48 2346.71 2135.51 1743.43 TRUE FALSE 2211.229319 2681.28333 2995.068973 2708.350319 2163.623103 1626.66516 1601.043459 2326.192962 2357.503906 1959.419271 1.128512592 1.368407145 1.528549309 1.382220926 1.104216507 0.830177177 0.817101007 1.187184895 1.203164602 1 10.93621042 -6.365095038 4.092059576 1.004420126 1.365547209 0.54137603 0.149457823 0.192632806 5.638543735 0.05229561 0.05993337 4.31E-07 6.365095038 0.361127083 TKEYVSNDAAQS(ph)DDEEKLQSQPTDTDGGR ddPTM_A459_MK2206_30min_R2 2 TKEYVSNDAAQSDDEEKLQSQPTDTDGGR 29 2 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 TKEYVSNDAAQS(0.925)DDEEKLQS(0.068)QPT(0.006)DTDGGR;TKEYVSNDAAQS(0.988)DDEEKLQS(0.011)QPT(0.001)DTDGGR 72.122 7.95E-05 64052400 114661 169528 162372 144776 155978 101192 175770 132240 126171 146847 TRUE FALSE 123439.5343 161109.486 167785.4014 132947.3377 149853.52 105042.9325 152691.1879 149524.222 137145.1255 142055.3944 0.868953515 1.134131419 1.181126575 0.935883767 1.054894963 0.7394505 1.074870747 1.052576867 0.965434126 1 17.11609409 -5.798081882 24.99998561 0.974630241 1.068677139 0.102379348 0.117014523 363.9931916 248339.3284 0.033170455 0.04920126 1.59E-06 5.798081882 0.094046899 TKFAS(ph)DDEHDEHDENGATGPVK ddPTM_A459_MK2206_30min_R1 1 TKFASDDEHDEHDENGATGPVK 22 1 P05455 P05455 SSB Lupus La protein 1 T(0.325)KFAS(0.674)DDEHDEHDENGATGPVK 79.163 0.00073762 15905000 2925 2868.5 2946.4 2763.6 2547 2648.7 2874.7 2824.8 2962.8 2580.2 TRUE FALSE 2676.21339 2681.760129 2746.406577 2976.452951 2445.547597 2798.667105 2682.934008 2800.103071 3270.793662 2899.854656 0.922878457 0.924791221 0.947084217 1.026414529 0.843334542 0.965105992 0.925196028 0.965601178 1.127916413 1 11.50176488 -8.093603622 5.892767912 1.06232131 0.937834892 0.488820155 0.051377025 0.185224095 9.335013889 0.033859704 0.012519713 8.06E-09 8.093603622 -0.124486418 TKFAS(ph)DDEHDEHDENGATGPVK ddPTM_A459_MK2206_30min_R2 1 TKFASDDEHDEHDENGATGPVK 22 1 P05455 P05455 SSB Lupus La protein 1 T(0.448)KFAS(0.552)DDEHDEHDENGATGPVK 55.127 0.011165 13495000 25751 31607 29076 28675 34048 22335 34444 27811 24616 31095 TRUE FALSE 27722.51636 30037.44234 30045.37933 26332.16077 32711.10444 23184.97408 29921.46143 31445.99319 26757.05518 30080.3727 0.92161479 0.998572812 0.998836671 0.875393435 1.087456754 0.770767514 0.994717111 1.045399055 0.889518739 1 14.87653482 -10.75699265 4.142512988 1.000026763 0.956411 0.023718 0.087663834 119319318.4 1.478479168 33331.03378 0.020044053 1.75E-11 10.75699265 -0.043615763 TKFICVTPTTCSNTIDLPMS(ph)PR ddPTM_A459_MK2206_30min_R1 1 TKFICVTPTTCSNTIDLPMSPR 22 1 G8JLH9;P40763;P40763-2 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 1 TKFICVTPTTCSNTIDLPMS(1)PR 107.31 3.24E-05 10631000 2058.5 1933 1932.5 2325.2 2738.9 1305.5 1070 2249.4 807.71 511.81 TRUE FALSE 1883.413765 1807.161349 1801.327284 2504.287307 2629.803813 1379.416282 998.6222523 2229.733733 891.6743449 575.2168868 3.274267165 3.141704269 3.131561896 4.353640104 4.571847374 2.398080296 1.736079512 3.876335664 1.550153282 1 9.16796222 -8.312574237 0.593974721 0.981694338 3.57144951 0.488764965 0.819988658 0.747341548 0.631721442 0.888831606 0.415486409 4.87E-09 8.312574237 2.589755172 TKPIVKPQT(ph)SPEYGQGINPISR ddPTM_A459_MK2206_30min_R2 2 TKPIVKPQTSPEYGQGINPISR 22 2 O95793-2;O95793-3;O95793;A0A087X1A5 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 T(0.081)KPIVKPQT(0.799)S(0.12)PEYGQGINPISR;T(0.004)KPIVKPQT(0.728)S(0.267)PEY(0.001)GQGINPISR 82.034 0.0012511 82645000 105438 119274 111075 121166 133820 121977 144544 105635 97910 150735 TRUE FALSE 113510.4143 113351.0266 114778.1851 111266.3502 128565.5544 126618.9202 125565.1992 119441.8572 106426.0348 145816.5293 0.778446826 0.777353755 0.787141112 0.763057184 0.881693969 0.868344082 0.861117733 0.819124264 0.729862625 1 17.15379474 -6.253775533 24.8180285 0.851450705 0.777320818 0.292157856 0.062841233 782.4386828 2533787.532 0.018339109 0.023221464 5.57E-07 6.253775533 -0.074129886 TKPIVKPQTSPEY(ph)GQGINPISR ddPTM_A459_MK2206_30min_R2 1 TKPIVKPQTSPEYGQGINPISR 22 2 O95793-2;O95793-3;O95793;A0A087X1A5 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 TKPIVKPQT(0.327)S(0.327)PEY(0.346)GQGINPISR 68.676 0.014362 12684000 29680 29548 37898 36059 36220 27247 32227 29287 29722 32244 TRUE FALSE 31952.32362 28080.68929 39161.5004 33112.86435 34797.82081 28283.90368 27995.55619 33114.91146 32307.16583 31191.88092 1.024379508 0.900256363 1.255503011 1.061586008 1.11560508 0.906771341 0.897527028 1.061651638 1.035755616 1 14.92888293 -6.750482712 24.99690421 0.979018463 1.071629736 0.187712038 0.094759486 400.142238 912896.1474 0.032956294 0.032652398 1.78E-07 6.750482712 0.092611273 TKPLASVTNANTSSTQAAPVAVTTPTVSSGQATPT(ph)SPIKK ddPTM_A459_MK2206_30min_R1 1 TKPLASVTNANTSSTQAAPVAVTTPTVSSGQATPTSPIKK 40 2 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YIS4;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 TKPLASVTNANTSST(0.001)QAAPVAVT(0.102)T(0.102)PT(0.102)VS(0.005)S(0.005)GQAT(0.089)PT(0.296)S(0.296)PIKK 101.77 3.10E-16 15071000 2389.3 2650.2 2524.4 2286.6 1906.4 1638.5 2504.7 2291 3549.6 4001.4 TRUE FALSE 2186.077488 2477.671498 2353.050761 2462.714328 1830.464051 1731.270454 2337.616033 2270.970029 3918.593622 4497.123641 0.486105712 0.550945826 0.523234616 0.547619884 0.407029959 0.384972839 0.519802483 0.504982787 0.871355545 1 12.13478683 -8.342937601 2.933306986 0.996597812 0.487022202 0.921394053 0.052633214 0.068806383 1.09578842 0.055163056 0.015141067 4.54E-09 8.342937601 -0.50957561 down TKPPRPDS(ph)PATTPNISVK ddPTM_A459_MK2206_30min_R1 2 TKPPRPDSPATTPNISVK 18 2 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 T(0.008)KPPRPDS(0.949)PAT(0.029)T(0.014)PNISVK;T(0.084)KPPRPDS(0.538)PAT(0.189)T(0.189)PNISVK 87.652 0.0076848 72782000 8910.8 9067.6 9368.8 8200.9 8609.7 7849.3 8766.9 8008.6 8113.6 8324.5 TRUE FALSE 8152.889668 8477.297592 8732.871959 8832.534739 8266.757418 8293.720583 8182.076097 7938.581655 8957.037755 9355.801907 0.871426068 0.906100586 0.933417792 0.944070303 0.883596885 0.886478857 0.874545675 0.848519639 0.957377876 1 13.1916456 -8.495386422 5.952230124 0.999922701 0.89593519 0.627817056 0.027174503 0.10780513 12.86054918 0.028915806 0.007496273 3.20E-09 8.495386422 -0.10398751 TKPPRPDS(ph)PATTPNISVK ddPTM_A459_MK2206_30min_R2 1 TKPPRPDSPATTPNISVK 18 2 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 TKPPRPDS(0.982)PAT(0.014)T(0.004)PNISVK 90.193 0.0066001 42751000 38650 49869 38466 47834 38128 27978 44846 37837 34549 43343 TRUE FALSE 41609.07372 47392.57798 39748.43724 43925.80919 36630.90314 29042.7224 38957.66633 42782.42581 37554.00957 41928.72146 0.992376401 1.130312977 0.948000222 1.047630542 0.873647034 0.692668924 0.929140336 1.020360849 0.895663122 1 15.35565122 -6.260551624 24.98685437 0.893830543 1.030948121 0.305722762 0.093768435 102.6568847 2889398.783 0.030010337 0.03647118 5.49E-07 6.260551624 0.137117578 TKPPRPDSPAT(ph)TPNISVK ddPTM_A459_MK2206_30min_R2 1 TKPPRPDSPATTPNISVK 18 2 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 TKPPRPDS(0.019)PAT(0.49)T(0.49)PNISVK 77.506 0.01773 35485000 69250 73451 64521 74133 56386 49886 69716 59680 45723 62410 TRUE FALSE 74551.83324 69803.53015 66672.09794 68076.09676 54172.00232 51784.44669 60562.20546 67480.38091 49699.90389 60373.56681 1.234842286 1.156193577 1.104325973 1.127581164 0.897280137 0.857733764 1.003124524 1.117714001 0.823206355 1 15.88162942 -6.163933808 5.044283685 0.954164736 1.156400902 0.592733922 0.083757289 0.176495946 7.120926287 0.026012469 0.033906074 6.86E-07 6.163933808 0.202236166 TKPTQAAGPS(ph)SPQKPPT(ph)PEETK ddPTM_A459_MK2206_30min_R2 1 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 2 T(0.005)KPT(0.001)QAAGPS(0.727)S(0.318)PQKPPT(0.857)PEET(0.092)K 55.532 0.024834 26661000 137610 96692 122220 79421 81470 45587 116090 97928 59394 137030 TRUE FALSE 148145.5274 91890.41588 126294.7538 72932.05024 78271.07845 47321.84523 100847.2436 110727.5258 64559.98276 132558.7223 1.117584153 0.693205353 0.952745708 0.550186732 0.590463434 0.356987789 0.760774107 0.835309242 0.487029308 1 17.01627208 -5.757117792 24.99977901 0.636907761 0.898381141 0.272000137 0.197519871 146.7774142 849072.6921 0.053004401 0.087858858 1.75E-06 5.757117792 0.261473381 TKPTQAAGPS(ph)SPQKPPTPEETK ddPTM_A459_MK2206_30min_R2 1 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TKPT(0.019)QAAGPS(0.434)S(0.434)PQKPPT(0.111)PEET(0.002)K 100.39 0.00015292 27085000 29266 29941 30312 26464 32148 18611 34164 29103 22376 37896 TRUE FALSE 31506.62746 28454.17348 31322.58695 24301.80655 30885.70799 19319.25465 29678.22576 32906.86203 24322.22403 36659.45662 0.859440656 0.776175538 0.854420383 0.662906895 0.842503158 0.52699239 0.809565348 0.897636382 0.663463845 1 15.16189778 -10.90473369 5.47220884 1.000096894 0.766162173 0.29129214 0.109543913 0.000126164 1.43E-05 0.103338208 0.025052854 1.25E-11 10.90473369 -0.233934721 TKPTQAAGPSS(ph)PQKPPT(ph)PEETK ddPTM_A459_MK2206_30min_R2 1 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 2 T(0.001)KPT(0.001)QAAGPS(0.05)S(0.95)PQKPPT(0.899)PEET(0.1)K 57.248 0.021343 18751000 120030 87679 117810 76356 83329 39667 107130 86241 51677 122750 TRUE FALSE 129219.5891 83324.98836 121737.7266 70117.47055 80057.08477 41176.55548 93063.70231 97512.99481 56171.77205 118744.6776 1.088213735 0.701715564 1.025205753 0.590489376 0.674195142 0.346765483 0.783729463 0.821198868 0.473046651 1 16.85750332 -5.767778521 24.9989941 0.65392348 0.914712082 0.278147062 0.195902063 190.5573743 751483.8769 0.052943315 0.080733375 1.71E-06 5.767778521 0.260788602 TKPTQAAGPSS(ph)PQKPPTPEETK ddPTM_A459_MK2206_30min_R2 3 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TKPTQAAGPS(0.051)S(0.931)PQKPPT(0.012)PEET(0.006)K;T(0.001)KPT(0.019)QAAGPS(0.234)S(0.741)PQKPPT(0.004)PEET(0.001)K;TKPTQAAGPS(0.109)S(0.884)PQKPPT(0.007)PEETK 96.016 8.07E-05 383626000 434910 425191 410040 403734 394761 250798 530380 378772 292741 458190 TRUE FALSE 468207.044 404076.6332 423710.5289 370747.6407 379260.6996 260342.2936 460740.4689 428278.8009 318203.083 443239.2978 1.056330173 0.911644421 0.9559408 0.836450293 0.855656756 0.587362842 1.039484701 0.966247359 0.71790359 1 18.75772627 -4.479715028 1.017018916 0.856488579 1.257727017 0.165526986 0.128514867 5.928014462 3.294126026 0.041859275 2.997717037 3.31E-05 4.479715028 0.401238438 TKPTQAAGPSSPQKPPT(ph)PEETK ddPTM_A459_MK2206_30min_R1 1 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TKPT(0.002)QAAGPS(0.006)S(0.454)PQKPPT(0.534)PEET(0.004)K 97.256 0.00060447 32664000 5334.2 6258.6 6341.9 5471.1 4814.7 3714.1 4603.2 5079.4 5557.6 5022.3 TRUE FALSE 4880.498279 5851.164002 5911.429498 5892.48507 4622.920304 3924.389132 4296.128927 5034.991341 6135.332408 5644.50044 0.864646629 1.03661326 1.047290112 1.043933849 0.819013189 0.695258894 0.761117653 0.892017176 1.086957557 1 12.46263019 -4.424870416 12.12094926 0.920781076 0.000105726 0.017742078 0.128846905 521495.0513 1572392.75 0.036203677 12277030.25 3.76E-05 4.424870416 -0.920675349 TKS(ph)LIAQDHR ddPTM_A459_MK2206_30min_R2 1 TKSLIAQDHR 10 1 O15013-7;O15013-4;O15013-5;O15013-6;O15013;E9PB39;H0YAN8 O15013-7 ARHGEF10 Rho guanine nucleotide exchange factor 10 1 T(0.205)KS(0.795)LIAQDHR 68.171 0.04437 26952000 74642 97524 87927 84078 91332 65912 103110 68353 80274 105460 TRUE FALSE 80356.64891 92681.09997 90858.4423 77208.55845 87745.84677 68420.32735 89571.53314 77286.97179 87256.08742 102018.8488 0.787664729 0.908470357 0.890604465 0.756806799 0.860094461 0.670663589 0.87799004 0.757575415 0.855293786 1 16.6384762 -14.18004141 8.680661134 0.972545484 0.828269335 0 0.08978721 0 0 0 0.019308878 6.61E-15 14.18004141 -0.14427615 TKS(ph)PTDDEVTPSAVVR ddPTM_A459_MK2206_30min_R1 1 TKSPTDDEVTPSAVVR 16 1 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 TKS(0.339)PT(0.147)DDEVT(0.179)PS(0.334)AVVR 158.14 0.00033755 39454000 4328.4 4860.9 4503.9 4470.9 4410.3 3414 4054.1 4122 4296.5 4624.9 TRUE FALSE 3960.246851 4544.454526 4198.187817 4815.249493 4234.628412 3607.29773 3783.658386 4085.961789 4743.13655 5197.867528 0.76189838 0.874292102 0.807675031 0.926389422 0.814685713 0.693995703 0.727925128 0.786084248 0.912515859 1 12.34370415 -8.474460496 3.235703477 0.998673764 0.801076703 0.51763509 0.063340675 0.196362857 4.487300166 0.067444535 0.017930514 3.35E-09 8.474460496 -0.197597061 TKS(ph)PTDDEVTPSAVVR ddPTM_A459_MK2206_30min_R2 2 TKSPTDDEVTPSAVVR 16 1 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 T(0.026)KS(0.955)PT(0.02)DDEVTPSAVVR;T(0.278)KS(0.692)PT(0.03)DDEVTPSAVVR 117.07 0.0088811 195473000 39362 49617 47612 43639 40479 31489 52906 36552 32790 45510 TRUE FALSE 42375.58498 47153.09193 49199.36032 40073.55411 38889.59107 32687.33596 45959.37865 41329.4719 35642.01493 44025.01243 0.962534311 1.071052325 1.117532003 0.910245151 0.883352188 0.74247193 1.043937892 0.938772521 0.809585573 1 15.42603579 -5.819729558 8.669855347 0.899354252 1.052226088 0.364071259 0.088474899 0.295468744 40.25022925 0.025234496 0.037613365 1.51E-06 5.819729558 0.152871836 TKSDES(ph)GEEKNGDEDCQR ddPTM_A459_MK2206_30min_R1 1 TKSDESGEEKNGDEDCQR 18 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBM7;E5RHK4 Q6PKG0 LARP1 La-related protein 1 1 T(0.012)KS(0.01)DES(0.978)GEEKNGDEDCQR 77.469 0.015533 16877000 645.5 837.75 1096.6 965.15 645.68 628.54 632.5 707.46 572.94 566.36 TRUE FALSE 590.5968353 783.2123227 1022.165847 1039.48602 619.9611984 664.1273916 590.3070791 701.2747518 632.4991633 636.5249526 0.927845535 1.230450306 1.605853538 1.633064055 0.97397784 1.043364269 0.927390319 1.101723898 0.993675363 1 9.314073261 -6.290911474 24.52978186 1.009643622 1.359138906 0.441047811 0.188806617 561.699003 467503.3957 0.063503492 0.072018698 5.12E-07 6.290911474 0.349495284 TKSNS(ph)LSEQLAINTSPDAVK ddPTM_A459_MK2206_30min_R2 1 TKSNSLSEQLAINTSPDAVK 20 1 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 T(0.223)KS(0.223)NS(0.277)LS(0.277)EQLAINTSPDAVK 59.789 0.017245 2618300 5107.2 11210 10740 11763 20177 18519 26228 20085 26609 23138 TRUE FALSE 5498.211159 10653.3277 11098.06624 10801.92527 19384.7496 19223.75352 22784.23209 22710.17846 28923.40272 22383.00895 0.245642182 0.475956013 0.495825484 0.482594869 0.866047529 0.858854748 1.017925344 1.014616869 1.292203509 1 14.45011637 -6.391499196 0.709772436 1.130169991 0.30861046 0.898970683 0.099653332 0.214524001 0.237886253 0.062183242 0.09581543 4.06E-07 6.391499196 -0.821559531 down TKSPPAS(ph)SAASADQHSQSGSSSDNTER ddPTM_A459_MK2206_30min_R2 1 TKSPPASSAASADQHSQSGSSSDNTER 27 1 Q8IY57-3;Q8IY57;Q8IY57-5 Q8IY57-3 YAF2 YY1-associated factor 2 1 T(0.001)KS(0.007)PPAS(0.428)S(0.428)AAS(0.137)ADQHSQSGSSSDNTER 126.29 3.94E-12 2247600 1916 6112.5 4220.7 10480 8164.4 7435 9199.2 5751.2 5995.1 6842.2 TRUE FALSE 2062.690433 5808.962138 4361.416031 9623.750476 7843.824633 7717.944135 7991.33399 6502.901587 6516.542961 6618.939574 0.311634577 0.877627311 0.658929725 1.453971647 1.185057598 1.166039371 1.207343548 0.982468795 0.984529756 1 12.69238438 -4.788869423 1.162378012 1.128422635 5.09E-18 0.623083855 0.185569147 1.044923009 1.190475879 0.058094896 1.441786831 1.63E-05 4.788869423 -1.128422635 TKSPPASSAAS(ph)ADQHSQSGSSSDNTER ddPTM_A459_MK2206_30min_R1 1 TKSPPASSAASADQHSQSGSSSDNTER 27 1 Q8IY57-3;Q8IY57;Q8IY57-5 Q8IY57-3 YAF2 YY1-associated factor 2 1 T(0.01)KS(0.008)PPAS(0.187)S(0.131)AAS(0.661)ADQHS(0.002)QSGSSSDNTER 96.317 1.30E-06 2400500 391.91 167.63 219.53 243.14 382.86 372.27 364.89 309.05 56.359 137.2 TRUE FALSE 358.5759965 156.7172565 204.6289152 261.8666849 367.6098755 393.3476057 340.5488539 306.3480084 62.21771973 154.1973718 2.325435202 1.016341943 1.327058385 1.698256474 2.384021668 2.550935863 2.20852567 1.986726524 0.403494035 1 7.268634365 -5.999125076 24.37710669 1.883162575 1.504013525 0 0.687505129 73.85074618 2057372.996 0.198090779 0.290845418 1.00E-06 5.999125076 -0.37914905 TKSPT(ph)DDEVTPSAVVR ddPTM_A459_MK2206_30min_R1 1 TKSPTDDEVTPSAVVR 16 1 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 T(0.03)KS(0.142)PT(0.827)DDEVTPS(0.001)AVVR 148.33 0.0030216 35423000 5373.1 6112.4 6259.3 5314.5 5903.2 5225 5955.6 5965.4 6039.6 5767.5 TRUE FALSE 4916.08963 5714.481649 5834.436155 5723.823711 5668.063044 5520.834985 5558.312791 5913.245137 6667.438033 6482.021442 0.758419217 0.881589439 0.900095164 0.883030666 0.874428308 0.851715014 0.857496823 0.912253251 1.028604748 1 12.66222808 -8.098577602 3.106072462 1.014554155 0.862367726 0.730274053 0.037407367 0.13974709 2.442365145 0.030213165 0.010030346 7.97E-09 8.098577602 -0.152186429 TKSPT(ph)DDEVTPSAVVR ddPTM_A459_MK2206_30min_R2 2 TKSPTDDEVTPSAVVR 16 1 Q5VTI5;A0A1B0GUN5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 TKS(0.212)PT(0.787)DDEVT(0.001)PSAVVR;T(0.006)KS(0.215)PT(0.778)DDEVT(0.001)PSAVVR 191.4 1.10E-05 16154000 37585 37006 39241 33723 34248 30436 40907 37236 30299 33722 TRUE FALSE 40462.5365 35168.33585 40549.27535 30967.72303 32903.25144 31594.26331 35535.86176 42102.87305 32934.35225 32621.6539 1.240358218 1.078067224 1.243017153 0.949299601 1.008632227 0.96850587 1.089333541 1.29064189 1.009585607 1 14.99354231 -5.750136596 24.99990595 1.054379564 1.176239487 0.291263298 0.100360611 348.8716222 771639.4871 0.028914793 0.049520219 1.78E-06 5.750136596 0.121859923 TKSVSSMS(ph)EFESLLDCSPYLAGGDAR ddPTM_A459_MK2206_30min_R1 1 TKSVSSMSEFESLLDCSPYLAGGDAR 26 1 O94964-2;H0YDM2;O94964;O94964-3;X6R3R3;O94964-4 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 T(0.207)KS(0.207)VS(0.207)S(0.071)MS(0.268)EFES(0.033)LLDCS(0.003)PY(0.001)LAGGDAR 52.927 0.0098076 15086000 2206.5 2187.6 2245.5 2029.1 2459.7 1727.2 2052.4 2145.1 2055.9 1604.1 TRUE FALSE 2018.825588 2045.186842 2093.081716 2185.381634 2361.72494 1824.992571 1915.488141 2126.345617 2269.618162 1802.828018 1.119810413 1.134432581 1.160999105 1.2121964 1.310011225 1.012294325 1.062490776 1.179450061 1.258921061 1 10.81604606 -6.774645933 24.99956642 1.111338141 1.184443211 0.190320766 0.086474026 505.4137723 956725.9155 0.032245414 0.028601533 1.68E-07 6.774645933 0.07310507 TLDFDPLLS(ph)PASPK ddPTM_A459_MK2206_30min_R1 1 TLDFDPLLSPASPK 14 0 Q53H80 Q53H80 AKIRIN2 Akirin-2 1 TLDFDPLLS(0.972)PAS(0.028)PK 201.76 5.49E-05 26335000 11135 13644 15571 13139 8496.1 7823.1 10003 10583 13197 13298 TRUE FALSE 10187.90978 12755.77312 14514.0839 14150.96806 8157.682346 8266.037161 9335.718122 10490.47395 14568.87538 14945.45663 0.6816727 0.85348835 0.971136865 0.946840796 0.545830251 0.553080268 0.624652585 0.701917258 0.974802961 1 13.86741936 -6.242726981 24.94631772 0.70402499 0.870288667 0.116313387 0.163378417 1431.116051 1907883.324 0.049604005 0.063929782 5.72E-07 6.242726981 0.166263676 TLDFDPLLS(ph)PASPK ddPTM_A459_MK2206_30min_R2 1 TLDFDPLLSPASPK 14 0 Q53H80 Q53H80 AKIRIN2 Akirin-2 1 TLDFDPLLS(0.997)PAS(0.003)PK 171.11 0.00014707 15781000 38540 34750 37345 25301 33500 23842 40071 29452 20749 44354 TRUE FALSE 41490.65203 33024.36553 38590.06366 23233.82737 32184.62168 24749.32402 34809.62957 33301.47752 22553.71051 42906.73261 0.966996308 0.769677939 0.899394135 0.541496077 0.750106562 0.576816796 0.811285956 0.776136413 0.525645024 1 15.38891642 -4.680152862 1.116735382 0.710481268 1.107091381 0.185602289 0.145276523 3.150747038 2.820105743 0.042886463 1.557069913 2.09E-05 4.680152862 0.396610113 TLDFDPLLS(ph)PASPKR ddPTM_A459_MK2206_30min_R2 1 TLDFDPLLSPASPKR 15 1 Q53H80 Q53H80 AKIRIN2 Akirin-2 1 TLDFDPLLS(0.566)PAS(0.434)PKR 94.973 0.0057086 13931000 37419 51016 46233 48646 58124 47619 52010 42297 40775 46638 TRUE FALSE 40283.82741 48482.61962 47774.38514 44671.46619 55841.75971 49431.17441 45181.02452 47825.36313 44321.5358 45116.20588 0.892890407 1.074616508 1.058918502 0.990142352 1.237731733 1.09564121 1.001436704 1.060048428 0.98238615 1 15.46135813 -4.758573401 24.92714646 1.060833873 0.892890172 0.316046114 0.071469417 94.15831059 818794.9363 0.018137408 0.12287589 1.74E-05 4.758573401 -0.167943701 TLDFDPLLSPAS(ph)PK ddPTM_A459_MK2206_30min_R1 2 TLDFDPLLSPASPK 14 0 Q53H80 Q53H80 AKIRIN2 Akirin-2 1 TLDFDPLLS(0.489)PAS(0.511)PK;TLDFDPLLSPAS(1)PK 222.75 4.53E-09 35652600 12490.3 14534.1 14922.4 12457.5 9609 8695.5 10577 10063.8 13146.7 12739.2 TRUE FALSE 11427.9344 13587.92745 13909.50906 13416.97881 9226.253183 9187.831695 9871.427629 9975.813258 14513.34651 14317.42827 0.798183457 0.949048055 0.971508905 0.937108156 0.644407152 0.641723606 0.689469327 0.696760135 1.013683899 1 13.80548476 -6.23903876 24.62384581 0.754304268 0.920578786 0.175354292 0.133629745 936.744725 1029714.776 0.039444185 0.05087999 5.77E-07 6.23903876 0.166274518 TLDFDPLLSPAS(ph)PK ddPTM_A459_MK2206_30min_R2 1 TLDFDPLLSPASPK 14 0 Q53H80 Q53H80 AKIRIN2 Akirin-2 1 TLDFDPLLS(0.292)PAS(0.708)PK 166.79 0.0002264 15606000 109610 105560 114180 128290 113220 87599 129910 107360 106520 128870 TRUE FALSE 118001.8259 100318.0439 117986.7042 117808.2966 108774.4139 90932.64133 112852.661 121392.3206 115784.9171 124664.9825 0.946551498 0.804701063 0.946430199 0.944999103 0.872533824 0.729416068 0.905247478 0.973748347 0.928768567 1 16.92769675 -7.613444033 5.3162732 0.96191778 0.872887214 0.280679486 0.066404837 0.301296752 13.77690089 0.033622852 0.018987299 2.44E-08 7.613444033 -0.089030566 TLDFDPLLSPAS(ph)PKR ddPTM_A459_MK2206_30min_R1 2 TLDFDPLLSPASPKR 15 1 Q53H80 Q53H80 AKIRIN2 Akirin-2 1 TLDFDPLLS(0.025)PAS(0.975)PKR;TLDFDPLLS(0.013)PAS(0.987)PKR 94.387 0.005903 35358000 11788.9 11870.4 12694.1 12315.7 12519.5 10772.1 10633.3 11528.7 10879 8427.9 TRUE FALSE 10786.19215 11097.6348 11832.45986 13264.25735 12020.8218 11382.00699 9923.971959 11427.90579 12009.91098 9472.011879 1.13874352 1.171623826 1.249202388 1.400363251 1.269088548 1.201646191 1.04771532 1.206491919 1.267936647 1 13.20945517 -7.005098325 16.13671657 1.144448533 1.248951262 0.240513606 0.095277401 3.877204871 12270.36205 0.036422901 0.030840117 9.88E-08 7.005098325 0.104502729 TLDFDPLLSPAS(ph)PKR ddPTM_A459_MK2206_30min_R2 1 TLDFDPLLSPASPKR 15 1 Q53H80 Q53H80 AKIRIN2 Akirin-2 1 TLDFDPLLS(0.095)PAS(0.905)PKR 82.709 0.012768 13746000 36371 44222 45609 49961 52142 36827 57226 36439 46044 47900 TRUE FALSE 39155.59172 42025.99978 47129.5813 45879.02648 50094.64309 38228.47729 49712.15746 41201.70241 50048.82389 46337.02692 0.845017351 0.906963665 1.017104127 0.990115886 1.081093165 0.825009282 1.072838737 0.889174493 1.08010434 1 15.49987786 -5.037366417 3.345637018 0.989948069 0.850217317 0.27938027 0.07858923 0.303138847 6.672015939 0.018993041 0.077962473 9.18E-06 5.037366417 -0.139730752 TLDS(ph)DEERPR ddPTM_A459_MK2206_30min_R2 2 TLDSDEERPR 10 1 Q9BW71;Q9BW71-2 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 T(0.402)LDS(0.598)DEERPR;TLDS(1)DEERPR 114.71 0.0037803 18675300 108664 90907 92834 104929 77955 67840 111077 86010 66655 100863 TRUE FALSE 116983.3994 86392.69057 95929.03923 96355.96505 74894.09501 70421.69874 96492.45647 97251.80232 72452.53142 97571.84857 1.198946224 0.885426399 0.983163081 0.987538583 0.767578929 0.721741975 0.988937464 0.996719891 0.742555691 1 16.57417734 -2.331506488 1.285524867 0.887959658 199.9940665 0.396840447 0.109307787 1050.108923 3.548074286 0.033684196 614551.135 0.004661155 2.331506488 199.1061068 TLDSGTSEIVKS(ph)PR ddPTM_A459_MK2206_30min_R1 4 TLDSGTSEIVKSPR 14 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR 220.52 3.61E-08 174166000 14661.7 14770.3 15565.2 13067.4 13858 12033.2 13399.9 13218.1 11468.2 10499.1 TRUE FALSE 13414.64542 13808.75079 14508.67759 14073.85341 13306.00652 12714.50939 12506.01712 13102.53555 12660.36043 11799.80777 1.136852878 1.170252181 1.229568979 1.192718872 1.127646041 1.077518349 1.059849225 1.110402457 1.072929379 1 13.52647574 -6.550201132 2.59968874 1.070043937 1.184548334 0.731319328 0.033689246 0.1567583 2.145435905 0.012133047 0.012758063 2.82E-07 6.550201132 0.114504397 TLDSGTSEIVKS(ph)PR ddPTM_A459_MK2206_30min_R2 2 TLDSGTSEIVKSPR 14 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 TLDSGTSEIVKS(1)PR;TLDS(0.001)GT(0.001)S(0.001)EIVKS(0.998)PR 78.249 0.021167 51610000 136883 168836 152929 166990 197871 158465 185230 145324 156029 190210 TRUE FALSE 147362.8677 160451.8498 158027.5765 153346.3828 190101.5903 164495.4966 160909.0785 164318.3458 169600.1204 184003.4633 0.800870077 0.87200451 0.85882936 0.833388568 1.033141371 0.893980438 0.874489402 0.893017679 0.921722436 1 17.4893734 -1.522878745 0.132962081 0.993160483 0.4362457 0.40087042 0.052293144 97.89623016 0.88008857 0.27743426 10.25627548 0.03 1.522878745 -0.556914782 TLEAEFNS(ph)PSPPTPEPGEGPR ddPTM_A459_MK2206_30min_R1 1 TLEAEFNSPSPPTPEPGEGPR 21 0 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 TLEAEFNS(0.5)PS(0.5)PPT(0.001)PEPGEGPR 229.93 6.67E-25 8198700 739.47 768.26 611.01 566.4 757.17 762.91 742.46 624.21 530.27 519.85 TRUE FALSE 676.5741934 718.2461344 569.5363436 610.0242261 727.0103156 806.1053049 692.9318481 618.7525978 585.3934641 584.2529427 1.158015893 1.229341064 0.974811254 1.044109805 1.244341727 1.379719717 1.18601345 1.059049176 1.001952102 1 9.190449285 -10.27762031 5.666629694 0.999999987 1.145572022 0.113294154 0.118724435 89932380.93 0.430389937 14.99536233 0.031624173 5.28E-11 10.27762031 0.145572035 TLEAEFNS(ph)PSPPTPEPGEGPR ddPTM_A459_MK2206_30min_R2 1 TLEAEFNSPSPPTPEPGEGPR 21 0 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 TLEAEFNS(0.571)PS(0.254)PPT(0.175)PEPGEGPR 198.6 1.35E-16 6290100 12505 15740 14419 16707 13182 15080 17480 12142 15335 14802 TRUE FALSE 13462.39241 14958.37449 14899.72226 15341.98466 12664.40845 15653.87997 15184.855 13729.00109 16668.81058 14319.01195 0.940176072 1.044651303 1.040555194 1.071441571 0.88444709 1.093223472 1.060468072 0.958795281 1.164103406 1 13.80564433 TLEAEFNSPS(ph)PPTPEPGEGPR ddPTM_A459_MK2206_30min_R2 2 TLEAEFNSPSPPTPEPGEGPR 21 0 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 TLEAEFNS(0.005)PS(0.987)PPT(0.008)PEPGEGPR;TLEAEFNS(0.004)PS(0.988)PPT(0.008)PEPGEGPR 212.55 4.12E-42 5451000 20244.8 27973 23071 26523 24197 28179 26221 24432 24153 25052 TRUE FALSE 21794.75745 26583.9015 23840.17563 24355.98606 23246.9042 29251.37159 22778.1512 27625.34629 26253.78428 24234.55529 0.899325661 1.096941998 0.983726556 1.005010646 0.959246164 1.207010867 0.939903824 1.139915544 1.083320241 1 14.56477799 TLEEVVMAEEEDEGTDRPGS(ph)PA ddPTM_A459_MK2206_30min_R1 1 TLEEVVMAEEEDEGTDRPGSPA 22 1 F8WC89;A6NKF1 F8WC89 SAC3D1 SAC3 domain-containing protein 1 1 TLEEVVMAEEEDEGTDRPGS(1)PA 200.13 1.18E-22 6082300 2081.8 2210.6 2007.1 1790 2259.6 2142.8 2427.1 1981.4 1591.4 1486.2 TRUE FALSE 1904.731978 2066.689538 1870.863644 1927.86611 2169.595347 2264.123484 2265.192587 1964.076829 1756.831725 1670.321676 1.140338418 1.237300316 1.120061884 1.154188524 1.298908694 1.355501468 1.356141526 1.175867413 1.051792448 1 10.70591025 -8.236677889 3.065803416 1.010614718 1.237824445 0.524483879 0.079562786 0.226494473 4.021876143 0.079973666 0.023570984 5.80E-09 8.236677889 0.227209727 TLEGELHDLR ddPTM_A459_MK2206_30min_R1 6 TLEGELHDLR 10 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;H0YAB0;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ;;;;; 161.51 0.00059601 169415500 33887.5 35183.3 35336 31003.4 37681.5 34066.4 37420.7 33780.5 30827 27502.2 FALSE TRUE 31005.19017 32892.86078 32937.49077 33391.28724 36180.56606 35995.21013 34924.43338 33485.16065 34031.57697 30909.38017 1.003099707 1.064170831 1.065614729 1.080296242 1.170536771 1.164540018 1.129897565 1.083333295 1.101011304 1 14.9157571 -5.214634508 1.210471772 1.114157828 1.003325157 0.284236888 0.046851067 0.954094516 1.951390107 0.01517542 0.109842684 6.10E-06 5.214634508 -0.11083267 TLEGELHDLR ddPTM_A459_MK2206_30min_R2 4 TLEGELHDLR 10 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;H0YAB0;P02545-2;Q5TCI8;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ;;; 194.12 0.00024072 101576700 271618 334302 305504 372050 330908 354334 351566 278500 293439 310807 FALSE TRUE 292413.2829 317701.0488 315689.3509 341652.3249 317914.8892 367818.4287 305404.9619 314900.9062 318961.7938 300665.393 0.972553841 1.056659849 1.049969029 1.13632075 1.057371073 1.223348071 1.0157636 1.047346697 1.060853032 1 18.1977993 -1.643574384 17.3488087 1.067981954 0.005328352 0 0.068048167 0 0 0.015462946 0 0.022720904 1.643574384 -1.062653602 TLEHSLPPS(ph)PRPLPR ddPTM_A459_MK2206_30min_R1 1 TLEHSLPPSPRPLPR 15 1 Q8TE67-2;Q8TE67;Q8TE67-3 Q8TE67-2 EPS8L3 Epidermal growth factor receptor kinase substrate 8-like protein 3 1 TLEHSLPPS(1)PRPLPR 62.287 0.032794 2591600 1053.2 1107.5 1201.6 857.04 1158 987.54 1372.8 1105.5 894.01 827.67 TRUE FALSE 963.6198094 1035.401549 1120.03874 923.0493693 1111.874408 1043.453661 1281.223017 1095.83473 986.9455387 930.2080082 1.035918634 1.113086041 1.204073422 0.99230426 1.195296534 1.12174229 1.377351093 1.178053425 1.060994455 1 9.86140955 TLENSPISSCDTSDT(ph)EGPVPVNSAAVLKK ddPTM_A459_MK2206_30min_R1 1 TLENSPISSCDTSDTEGPVPVNSAAVLKK 29 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 TLENS(0.001)PIS(0.002)S(0.007)CDT(0.221)S(0.221)DT(0.548)EGPVPVNSAAVLKK 80.685 3.43E-05 10346000 1360.3 1604 1380.7 1602 1840.2 1304.5 1109.4 1676.7 983 788.4 TRUE FALSE 1244.599342 1499.579308 1286.981931 1725.386318 1766.900937 1378.359663 1035.39395 1662.040789 1085.186368 886.0729441 1.404624021 1.692388102 1.452455962 1.947228306 1.994080678 1.55558261 1.168519993 1.875738109 1.224714483 1 9.79128166 -8.673459081 0.773099169 0.990741793 1.665974047 0.386380266 0.255335454 0.950335538 1.21253677 0.258991873 0.094431102 2.12E-09 8.673459081 0.675232253 TLEPVKPPTVPNDYMT(ph)SPAR ddPTM_A459_MK2206_30min_R1 1 TLEPVKPPTVPNDYMTSPAR 20 1 A0A0A0MRT6;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0;B6VEX4;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7 A0A0A0MRT6 ABI1 Abl interactor 1 1 TLEPVKPPT(0.006)VPNDY(0.371)MT(0.468)S(0.155)PAR 75.743 0.0082466 9160400 2029.9 1344.8 1610.7 1483.8 1489.9 1573 1673.8 1474.8 1490.5 1477.6 TRUE FALSE 1857.246346 1257.253276 1501.370172 1598.082533 1430.554128 1662.061901 1562.143856 1461.905979 1645.442809 1660.656243 1.118380973 0.757082196 0.904082454 0.96231989 0.861439045 1.000846447 0.94067864 0.880318239 0.990838902 1 10.69753775 -6.765183405 24.9970981 0.95369021 0.912966571 0.042655125 0.091085601 361.135371 2411109.966 0.030265158 0.027711386 1.72E-07 6.765183405 -0.040723639 TLEPVKPPTVPNDYMT(ph)SPAR ddPTM_A459_MK2206_30min_R2 2 TLEPVKPPTVPNDYMTSPAR 20 1 A0A0A0MRT6;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0;B6VEX4;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7 A0A0A0MRT6 ABI1 Abl interactor 1 1 TLEPVKPPTVPNDY(0.002)MT(0.692)S(0.306)PAR;TLEPVKPPTVPNDY(0.008)MT(0.496)S(0.496)PAR 82.294 0.0046558 24884000 63693 56831 58720 63935 63320 55821 67055 67031 49999 66623 TRUE FALSE 68569.38505 54008.85518 60677.69549 58711.30598 60833.73864 57945.30727 58250.59795 75792.18185 54347.82264 64449.09697 1.063930889 0.838007943 0.941482478 0.91097174 0.943903662 0.899086411 0.903823338 1.17600068 0.843267403 1 15.97587252 TLEPVKPPTVPNDYMTS(ph)PAR ddPTM_A459_MK2206_30min_R1 2 TLEPVKPPTVPNDYMTSPAR 20 1 A0A0A0MRT6;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0;B6VEX4;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7 A0A0A0MRT6 ABI1 Abl interactor 1 1 TLEPVKPPTVPNDYMT(0.26)S(0.739)PAR;TLEPVKPPTVPNDYMT(0.063)S(0.937)PAR 130.98 8.86E-05 136050000 7733.1 6421.4 7110.5 5232.1 6685.7 5768.9 7626 6534 5353 5522.3 TRUE FALSE 7075.359237 6003.365693 6627.859071 5635.077249 6419.394412 6095.530133 7117.283454 6476.873927 5909.463506 6206.444215 1.140002067 0.967279409 1.067899564 0.907939724 1.034311143 0.982129207 1.146757017 1.043572407 0.952149621 1 12.59955124 TLEPVKPPTVPNDYMTS(ph)PAR ddPTM_A459_MK2206_30min_R2 2 TLEPVKPPTVPNDYMTSPAR 20 1 A0A0A0MRT6;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0;B6VEX4;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7 A0A0A0MRT6 ABI1 Abl interactor 1 1 TLEPVKPPTVPNDYMT(0.056)S(0.944)PAR;TLEPVKPPT(0.139)VPNDY(0.169)MT(0.076)S(0.615)PAR 150.48 7.58E-06 59194000 77282 83887 74486 77840 86572 71802 98257 66534 70779 94840 TRUE FALSE 83198.76934 79721.29356 76969.32606 71480.223 83172.74829 74534.47542 85355.73787 75230.22225 76935.22948 91745.37857 0.906844254 0.868940701 0.838944994 0.779115244 0.906560631 0.812405776 0.930354632 0.819989229 0.83857335 1 16.48534787 -11.05057723 3.063792642 1.005177744 0.85474993 0.476696955 0.045331042 47027466.09 57442018.29 2045143.62 0.010739815 8.90E-12 11.05057723 -0.150427813 TLEPVRPPVVPNDYVPS(ph)PTR ddPTM_A459_MK2206_30min_R1 3 TLEPVRPPVVPNDYVPSPTR 20 1 H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;H7C3Q7 H0Y6B5;H7C3Q7 ABI2 Abl interactor 2 1 TLEPVRPPVVPNDYVPS(0.783)PT(0.217)R;TLEPVRPPVVPNDYVPS(0.884)PT(0.116)R;TLEPVRPPVVPNDYVPS(0.5)PT(0.5)R 108.94 0.00022644 30763800 3309.28 3290.9 2851.92 2574.84 3124.26 3002.78 3108.96 3083.91 2980.93 2775.99 TRUE FALSE 3027.808358 3076.661812 2658.339616 2773.154623 2999.814108 3172.794809 2901.566951 3056.9477 3290.808341 3119.900599 0.970482316 0.986140973 0.852059074 0.888859928 0.961509514 1.016953813 0.930019037 0.979822146 1.054779868 1 11.60728435 -6.508600239 7.729234136 0.990808273 0.923721152 0.349651896 0.045946897 0.214491863 77.49096672 0.015693267 0.016891178 3.10E-07 6.508600239 -0.06708712 TLEPVRPPVVPNDYVPS(ph)PTR ddPTM_A459_MK2206_30min_R2 1 TLEPVRPPVVPNDYVPSPTR 20 1 H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;H7C3Q7 H0Y6B5;H7C3Q7 ABI2 Abl interactor 2 1 TLEPVRPPVVPNDYVPS(0.88)PT(0.12)R 94.838 0.00059973 13937000 19450 23614 20916 22512 22577 18043 21778 14833 21550 20789 TRUE FALSE 20939.10695 22441.3631 21613.329 20672.69759 21690.51354 18729.63901 18918.52244 16771.72403 23424.38005 20110.65663 1.041194593 1.115894101 1.074720204 1.027947419 1.078558196 0.931329064 0.94072127 0.833971975 1.164774501 1 14.29567257 -6.754731525 24.94874426 0.961692727 1.068528086 0.244401843 0.080721993 195.5996661 727498.8307 0.026039425 0.025475888 1.76E-07 6.754731525 0.106835359 TLEPVRPPVVPNDYVPSPT(ph)R ddPTM_A459_MK2206_30min_R1 1 TLEPVRPPVVPNDYVPSPTR 20 1 H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;H7C3Q7 H0Y6B5;H7C3Q7 ABI2 Abl interactor 2 1 TLEPVRPPVVPNDYVPS(0.167)PT(0.833)R 117.51 0.00036332 12916000 1192 1002.2 1194.4 1169.9 1123.2 1013.4 1048.7 1074.9 758.98 970.03 TRUE FALSE 1090.614141 936.9565978 1113.327456 1260.005901 1078.460566 1070.777832 978.7431365 1065.502263 837.878687 1090.20464 1.000375618 0.859431857 1.021209611 1.155751732 0.989227642 0.982180586 0.897760935 0.977341523 0.768551753 1 10.09038325 -7.139498378 2.681078742 0.907525392 1.00586535 0.204122467 0.088005672 0.494420699 6.896252444 0.039536592 0.028997695 7.25E-08 7.139498378 0.098339958 TLEPVRPPVVPNDYVPSPT(ph)R ddPTM_A459_MK2206_30min_R2 1 TLEPVRPPVVPNDYVPSPTR 20 1 H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;H7C3Q7 H0Y6B5;H7C3Q7 ABI2 Abl interactor 2 1 TLEPVRPPVVPNDYVPS(0.44)PT(0.56)R 119.2 0.00035376 15585000 14976 17630 13189 20582 18588 13077 12239 12509 13359 16249 TRUE FALSE 16122.57407 16754.51984 13628.71468 18900.38476 17858.14172 13574.6544 10632.0046 14143.96925 14520.94167 15718.79646 1.025687566 1.065890756 0.867032963 1.20240661 1.136101086 0.863593751 0.676387955 0.899812482 0.923794752 1 13.94020314 -6.778665492 23.57030658 0.854185278 1.057038147 0.40699082 0.111550797 122.2792382 167311.5117 0.04042609 0.035757926 1.66E-07 6.778665492 0.202852869 TLEVVS(ph)PSQSVTGSAGHT(ph)PYYQS(ph)PTDEK ddPTM_A459_MK2206_30min_R1 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 3 T(0.021)LEVVS(0.517)PS(0.377)QS(0.388)VT(0.278)GS(0.276)AGHT(0.389)PY(0.095)Y(0.296)QS(0.288)PT(0.076)DEK 59.793 0.01105 3520200 405.67 317.8 454.46 280.9 403.66 279.4 424.99 394.1 398.83 343.86 TRUE FALSE 371.1656362 297.1111622 423.6125214 302.5349667 387.5813674 295.2193865 396.6396925 390.6544252 440.2898057 386.4599728 0.960424526 0.768801902 1.096135567 0.782836485 1.00290171 0.763906762 1.026340942 1.010853524 1.139289543 1 8.594175186 -7.487283758 21.21908093 1.048762588 0.898580832 0.317724416 0.106827809 110.8273756 66067.2604 0.0414327 0.0279041 3.26E-08 7.487283758 -0.150181756 TLEVVS(ph)PSQSVTGSAGHTPY(ph)YQSPTDEK ddPTM_A459_MK2206_30min_R2 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 T(0.004)LEVVS(0.926)PS(0.044)QS(0.018)VT(0.001)GS(0.006)AGHT(0.002)PY(0.488)Y(0.488)QS(0.02)PT(0.002)DEK 122.06 5.86E-11 19540000 58442 66886 64057 90963 94104 79989 127330 76306 76035 82372 TRUE FALSE 62916.36445 63564.5385 66192.62841 83531.03192 90409.00413 83033.03745 110611.418 86279.4562 82648.38686 79684.20839 0.789571306 0.79770559 0.830686905 1.048275858 1.134591232 1.042026257 1.388122192 1.082767313 1.03719907 1 16.28200622 -5.815439995 2.521826573 1.128295162 0.792468012 0.651135058 0.101046776 0.168000687 2.175944148 0.030622121 0.05344357 1.53E-06 5.815439995 -0.33582715 TLEVVS(ph)PSQSVTGSAGHTPYYQS(ph)PTDEK ddPTM_A459_MK2206_30min_R1 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 TLEVVS(0.563)PS(0.184)QS(0.226)VT(0.005)GS(0.022)AGHTPY(0.057)Y(0.17)QS(0.67)PT(0.103)DEK 146.8 2.14E-13 47554000 4180.5 2800 3507.5 2282.6 3773.9 4005.5 4474.6 3768.6 3317.9 3047.5 TRUE FALSE 3824.926522 2617.719491 3269.420672 2458.406248 3623.577572 4232.287949 4176.107598 3735.651528 3662.807578 3425.047307 1.116751443 0.764287105 0.954562194 0.717772932 1.05796424 1.235687443 1.219284647 1.090686111 1.069418098 1 11.7419082 -6.507077002 21.91057337 1.136047353 0.884669082 0.462205243 0.119564205 113.3785687 157210.2798 0.036326554 0.039875 3.11E-07 6.507077002 -0.251378271 TLEVVSPS(ph)QSVTGS(ph)AGHTPYYQSPTDEK ddPTM_A459_MK2206_30min_R2 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 T(0.001)LEVVS(0.115)PS(0.42)QS(0.42)VT(0.221)GS(0.601)AGHT(0.036)PY(0.091)Y(0.091)QS(0.004)PT(0.001)DEK 75.524 0.0025812 0 9443.1 13160 13267 15793 14568 10703 12389 14734 11875 13459 TRUE FALSE 10166.071 12506.49354 13709.31516 14502.66138 13995.98712 11110.31016 10762.30942 16659.78439 12907.86603 13019.83393 0.780814183 0.960572431 1.052956223 1.11388989 1.07497432 0.853337318 0.826608809 1.279569653 0.991400205 1 13.66842343 -4.800587304 2.889816755 1.025490273 0.743929806 0.267539588 0.121144908 0.556922337 6.765630834 0.032679322 0.365494207 1.58E-05 4.800587304 -0.281560466 TLEVVSPS(ph)QSVTGSAGHT(ph)PYYQSPTDEK ddPTM_A459_MK2206_30min_R1 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 T(0.001)LEVVS(0.277)PS(0.442)QS(0.225)VT(0.076)GS(0.134)AGHT(0.747)PY(0.019)Y(0.027)QS(0.041)PT(0.011)DEK 109.97 2.51E-09 43016000 7585.3 4471 5631.7 3702.7 6867.6 6533.2 8240.7 6914.6 5039.7 5286.2 TRUE FALSE 6940.130403 4179.937087 5249.435895 3987.882596 6594.04895 6903.104138 7690.977939 6854.146381 5563.59485 5941.094365 1.168156905 0.70356349 0.883580629 0.67123704 1.109904766 1.161924675 1.294538929 1.153684146 0.9364596 1 12.53651299 -6.365050507 7.794629786 1.13063917 0.848107222 0.386417444 0.154654297 0.270989405 18.17308771 0.047330316 0.053667077 4.31E-07 6.365050507 -0.282531948 TLEVVSPS(ph)QSVTGSAGHTPYYQSPTDEK ddPTM_A459_MK2206_30min_R1 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TLEVVS(0.015)PS(0.336)QS(0.336)VT(0.078)GS(0.235)AGHTPYYQSPTDEK 81.726 3.65E-05 50448000 1698.3 1686.6 1445.5 681.69 2106 2101.9 2047.4 1670 999.91 1187.7 TRUE FALSE 1553.850667 1576.802033 1347.383487 734.1938819 2022.11356 2220.907762 1910.821682 1655.399366 1103.854223 1334.841243 1.164071514 1.181265594 1.009396057 0.550023372 1.514871953 1.663799177 1.431497335 1.240147003 0.826955437 1 10.38245245 -6.295938616 24.99982773 1.318362792 0.993208963 0.212446474 0.279451323 972.2877648 704564.3793 0.092433169 0.104814209 5.06E-07 6.295938616 -0.325153828 TLEVVSPS(ph)QSVTGSAGHTPYYQSPTDEK ddPTM_A459_MK2206_30min_R2 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TLEVVS(0.005)PS(0.373)QS(0.373)VT(0.083)GS(0.12)AGHT(0.039)PY(0.003)Y(0.004)QSPTDEK 91.541 7.54E-06 259250000 72685 120210 87446 174220 175020 159750 173380 113860 141500 129680 TRUE FALSE 78249.81949 114240.5462 90361.406 159985.6687 168147.8354 165829.3982 150614.9977 128741.8929 153807.4142 125448.5522 0.623760244 0.910656553 0.720306487 1.275309008 1.340372865 1.321891686 1.200611686 1.026252521 1.226059699 1 16.9367363 -5.760085092 25 1.21085924 0.767482557 0.728803942 0.124705119 18.70769399 345326.7826 0.035290522 0.057095777 1.74E-06 5.760085092 -0.443376683 TLEVVSPSQS(ph)VTGSAGHTPYYQS(ph)PTDEK ddPTM_A459_MK2206_30min_R1 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 T(0.001)LEVVS(0.293)PS(0.205)QS(0.246)VT(0.107)GS(0.197)AGHT(0.05)PY(0.086)Y(0.245)QS(0.485)PT(0.085)DEK 74.667 0.00042728 10355000 932.71 786.67 817.84 477.92 901.41 994.2 1242.7 855.44 881.36 764.17 TRUE FALSE 853.3781166 735.45764 762.3272994 514.7294812 865.5049309 1050.490745 1159.80175 847.9609783 972.980526 858.8411488 0.993639066 0.856337218 0.887623166 0.599330251 1.007759039 1.223149061 1.350426388 0.987331568 1.132899288 1 9.746247505 -6.51457905 10.78232664 1.147335583 0.835070827 0.535512797 0.133582748 0.214702118 264.9473627 0.043764189 0.046396494 3.06E-07 6.51457905 -0.312264756 TLEVVSPSQS(ph)VTGSAGHTPYYQSPTDEK ddPTM_A459_MK2206_30min_R1 3 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.001)LEVVS(0.102)PS(0.397)QS(0.49)VT(0.001)GS(0.008)AGHTPYYQSPTDEK;TLEVVS(0.057)PS(0.303)QS(0.369)VT(0.04)GS(0.229)AGHT(0.001)PYYQSPTDEK;TLEVVS(0.066)PS(0.351)QS(0.512)VT(0.015)GS(0.055)AGHTPYYQSPTDEK 120.27 2.65E-12 238824000 18209.6 10705.5 13794.5 9077.8 18780.4 20066.8 20854.6 16233.3 12640.4 11876.8 TRUE FALSE 16660.7779 10008.57 12858.16777 9776.973729 18032.3369 21202.96487 19463.42769 16091.37397 13954.41481 13348.18765 1.248167791 0.74980741 0.963289408 0.732457019 1.350920243 1.588452712 1.458132609 1.205510021 1.04541644 1 13.70435625 -6.274385156 24.8611348 1.309869591 0.913875836 0.389468898 0.21263708 684.6852088 1314870.277 0.067254831 0.076737486 5.32E-07 6.274385156 -0.395993756 TLEVVSPSQS(ph)VTGSAGHTPYYQSPTDEK ddPTM_A459_MK2206_30min_R2 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TLEVVS(0.072)PS(0.307)QS(0.495)VT(0.057)GS(0.036)AGHT(0.005)PY(0.014)Y(0.014)QSPTDEK 130.27 2.02E-12 226900000 117510 255020 179250 281380 301820 286790 326430 230750 247020 191330 TRUE FALSE 126506.6559 242356.0776 185226.1055 258390.3539 289969.0303 297703.9944 283569.3489 260909.8173 268505.3531 185086.9178 0.683498637 1.309417654 1.000752013 1.396048716 1.566664104 1.608455087 1.532087477 1.409661042 1.450698711 1 17.4978434 -4.443326521 0.810982235 1.453688381 1.04E-13 0.505341155 0.201842927 3.188597538 1.107740826 0.072869967 4.737236866 3.60E-05 4.443326521 -1.453688381 TLEVVSPSQSVTGS(ph)AGHTPY(ph)YQSPTDEK ddPTM_A459_MK2206_30min_R1 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 TLEVVS(0.169)PS(0.036)QS(0.036)VT(0.142)GS(0.616)AGHT(0.027)PY(0.422)Y(0.422)QS(0.117)PT(0.013)DEK 80.835 0.00092409 14891000 1088.3 752.44 1031.6 714.64 1156.7 1348.1 1305.9 1171 1032.4 1033 TRUE FALSE 995.7343701 703.4560192 961.5778662 769.6816966 1110.62619 1424.428257 1218.785794 1160.76207 1139.721674 1160.975839 0.857670192 0.60591788 0.828249679 0.662960994 0.956631613 1.226923257 1.049794279 0.999815872 0.981692845 1 10.18112223 -6.420964736 4.713352094 1.055427703 0.737669608 0.713368784 0.093637031 0.119054586 4.268240369 0.029284065 0.033061156 3.79E-07 6.420964736 -0.317758095 TLEVVSPSQSVTGS(ph)AGHTPYY(ph)QSPTDEK ddPTM_A459_MK2206_30min_R2 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 TLEVVS(0.033)PS(0.118)QS(0.119)VT(0.121)GS(0.599)AGHT(0.014)PY(0.107)Y(0.836)QS(0.042)PT(0.011)DEK 106.72 1.61E-08 15028000 39867 54018 44126 52812 52859 48310 65215 53686 42141 59427 TRUE FALSE 42919.24817 51335.54467 45597.13882 48497.09066 50783.49006 50148.4709 56652.19216 60702.94453 45806.34801 57487.90186 0.746578789 0.892979966 0.793160602 0.84360516 0.883376996 0.872330861 0.98546286 1.055925553 0.796799788 1 15.81097076 -6.79689922 1.43862365 0.96161347 0.822577436 0.408060621 0.072911103 0.406384592 1.751914031 0.03291283 0.028889639 1.60E-07 6.79689922 -0.139036033 TLEVVSPSQSVTGS(ph)AGHTPYYQS(ph)PTDEK ddPTM_A459_MK2206_30min_R2 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 T(0.001)LEVVS(0.118)PS(0.061)QS(0.075)VT(0.149)GS(0.545)AGHT(0.177)PY(0.096)Y(0.096)QS(0.555)PT(0.129)DEK 69.418 0.0022792 16886000 26884 35245 32016 42584 53820 40156 46682 35512 41437 36989 TRUE FALSE 28942.25971 33494.78455 33083.39746 39104.75098 51706.75638 41684.16472 40552.59732 40153.54033 45041.11536 35782.05196 0.808848518 0.936077802 0.924580779 1.092859376 1.445047267 1.164946179 1.133322297 1.122169863 1.258762784 1 15.1269485 -5.829121691 3.49115877 1.194968091 0.888678461 0.583274542 0.112045857 0.161732999 3.940721626 0.032470475 0.052590669 1.48E-06 5.829121691 -0.30628963 TLEVVSPSQSVTGSAGHT(ph)PYYQSPTDEK ddPTM_A459_MK2206_30min_R1 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TLEVVSPSQSVTGS(0.012)AGHT(0.486)PY(0.378)Y(0.122)QS(0.001)PTDEK 125.19 5.05E-12 18686000 3083.4 2863.7 2708.9 2570.8 2554 2481.9 3061.7 2699.4 3072.1 2803.2 TRUE FALSE 2821.140638 2677.272609 2525.027415 2768.803461 2452.268772 2622.423033 2857.459579 2675.79943 3391.455789 3150.481579 0.895463302 0.849797894 0.801473474 0.878850865 0.778379022 0.832387991 0.906991362 0.849330289 1.076488055 1 11.62135666 -8.253967514 24.77703398 1.038244032 0.8475301 0.77223136 0.041085508 200.3667081 664430.8201 0.028951451 0.010469381 5.57E-09 8.253967514 -0.190713932 TLEVVSPSQSVTGSAGHT(ph)PYYQSPTDEK ddPTM_A459_MK2206_30min_R2 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TLEVVSPS(0.001)QS(0.001)VT(0.001)GS(0.003)AGHT(0.384)PY(0.176)Y(0.225)QS(0.199)PT(0.011)DEK 74.905 0.00014271 143710000 21906 47455 32668 63194 65546 61840 70882 44127 64664 49377 TRUE FALSE 23583.1402 45098.45371 33757.13482 58030.84805 62972.3347 64193.36453 61575.10826 49894.55041 70288.35783 47765.83253 0.493724048 0.944157179 0.706721374 1.214902891 1.318355221 1.34391805 1.289103633 1.044565702 1.47151958 1 15.54369139 -5.781919563 6.597480435 1.253537458 0.736439187 0.67894015 0.165271847 0.086741331 14.13148251 0.043899031 0.068234694 1.65E-06 5.781919563 -0.517098271 TLEVVSPSQSVTGSAGHTPY(ph)YQSPTDEK ddPTM_A459_MK2206_30min_R1 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TLEVVSPSQSVTGSAGHT(0.042)PY(0.88)Y(0.054)QS(0.022)PT(0.002)DEK 136.26 1.39E-11 270600000 5042.8 2211.4 3160.3 1903.4 5103 4992 5264 4106.3 2748.5 2588.5 TRUE FALSE 4613.883379 2067.437458 2945.787641 2050.000198 4899.736704 5274.642726 4912.848165 4070.399052 3034.216411 2909.182922 1.585972248 0.710659148 1.012582474 0.70466528 1.684231221 1.81310109 1.688738143 1.39915542 1.042978902 1 11.5063983 -6.267238644 24.96650958 1.48928045 0.983205647 0.275626097 0.338438913 550.6420173 2370574.622 0.104854772 0.122092642 5.40E-07 6.267238644 -0.506074804 TLEVVSPSQSVTGSAGHTPYY(ph)QSPTDEK ddPTM_A459_MK2206_30min_R2 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TLEVVS(0.005)PS(0.015)QS(0.015)VT(0.005)GS(0.085)AGHT(0.077)PY(0.278)Y(0.375)QS(0.102)PT(0.044)DEK 70.761 0.0028692 4613000 4963.8 8715.9 7836 10481 9100.9 10923 9349 8635.4 9765.8 12283 TRUE FALSE 5343.832345 8283.08108 8097.248329 9624.668773 8743.552938 11338.68242 8121.46507 9764.07643 10615.21163 11882.20672 0.449733999 0.697099561 0.681459978 0.810006845 0.73585262 0.954257293 0.683498046 0.821739317 0.893370389 1 13.53651517 -4.195788364 0.513986733 0.859503608 7.05E-55 0.649863215 0.0898657 5.095332447 0.6590131 0.050346914 2.994153142 6.37E-05 4.195788364 -0.859503608 TLEVVSPSQSVTGSAGHTPYYQS(ph)PTDEK ddPTM_A459_MK2206_30min_R2 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK 28 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TLEVVSPSQSVTGSAGHT(0.01)PY(0.091)Y(0.135)QS(0.594)PT(0.17)DEK 91.618 7.37E-06 126570000 73655 143380 98349 196180 201370 245070 264740 138220 178460 166380 TRUE FALSE 79294.08343 136259.9577 101627.9066 180151.4665 193463.202 254396.3106 229979.32 156285.8286 193982.1282 160951.0342 0.49265967 0.84659262 0.631421271 1.119293624 1.202000366 1.580582019 1.428877553 0.971014752 1.20522449 1 17.29626232 -5.860276845 3.355941598 1.252467962 0.670343014 0.649499373 0.188426398 0.154668743 3.426763023 0.05776531 0.09238631 1.38E-06 5.860276845 -0.582124948 TLFLGIPDENFEDHSAPPS(ph)PEEK ddPTM_A459_MK2206_30min_R1 2 TLFLGIPDENFEDHSAPPSPEEK 23 0 Q99683-2;Q99683 Q99683-2 MAP3K5 Mitogen-activated protein kinase kinase kinase 5 1 TLFLGIPDENFEDHS(0.017)APPS(0.983)PEEK;TLFLGIPDENFEDHS(0.132)APPS(0.868)PEEK 89.181 0.00012939 5664700 1982.2 2114.37 2348.91 1651.04 1843.32 1344.07 1932.29 1569.87 2143.49 2314.28 TRUE FALSE 1813.603481 1976.724129 2189.472534 1778.203387 1769.896661 1420.170082 1803.39046 1556.144792 2366.313456 2600.990478 0.697274172 0.759988991 0.84178414 0.683663936 0.680470258 0.546011258 0.693347582 0.598289308 0.909773979 1 11.3448454 -8.426964379 4.574469891 0.997284891 0.690975021 0.669724794 0.07615631 0.130501243 4.254138705 0.080250074 0.020960633 3.74E-09 8.426964379 -0.30630987 TLGT(ph)PTQPGSTPR ddPTM_A459_MK2206_30min_R1 2 TLGTPTQPGSTPR 13 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 T(0.078)LGT(0.922)PTQPGSTPR;T(0.183)LGT(0.802)PT(0.015)QPGSTPR 180.3 0.00026161 48499000 7524.9 6878.2 6320.4 7082.6 7146.8 7348.1 7069.1 6292 5231.9 5241.5 TRUE FALSE 6884.86774 6430.42793 5891.388858 7628.103079 6862.127822 7764.143072 6597.533237 6236.989707 5775.774728 5890.856591 1.168737964 1.091594716 1.000090355 1.294905581 1.164877759 1.317998996 1.119961611 1.058757688 0.980464324 1 12.52426172 -7.83561709 2.64637942 0.996892772 1.169107171 0.415415243 0.086160659 0.303537182 4.201337889 0.061437044 0.025569456 1.46E-08 7.83561709 0.172214399 TLGT(ph)PTQPGSTPR ddPTM_A459_MK2206_30min_R2 1 TLGTPTQPGSTPR 13 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 T(0.032)LGT(0.623)PT(0.295)QPGS(0.046)T(0.005)PR 106.55 0.016185 19289000 26679 30533 32451 32524 34912 35768 34368 29102 30763 26705 TRUE FALSE 28721.56475 29016.77562 33532.90014 29866.68516 33541.17946 37129.1763 29855.44032 32905.73132 33438.71013 25833.61804 1.111790254 1.123217645 1.298033442 1.156117007 1.298353928 1.437242598 1.155681727 1.273756207 1.294387417 1 14.65696209 -5.245527529 22.00059557 1.252209578 1.117503746 0.153775279 0.110876485 269.9858463 373286.9819 0.026963594 0.070577038 5.68E-06 5.245527529 -0.134705831 TLGTPTQPGST(ph)PR ddPTM_A459_MK2206_30min_R1 2 TLGTPTQPGSTPR 13 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 TLGT(0.001)PT(0.018)QPGS(0.009)T(0.973)PR;TLGTPT(0.003)QPGS(0.036)T(0.961)PR 143.64 0.0016649 16303100 7872.2 8257 6838.5 6684.1 9042.2 7044.8 7650.9 7448.7 6321.6 6272.8 TRUE FALSE 7202.628051 7719.467799 6374.321673 7198.91054 8682.030027 7443.670488 7140.522421 7383.576801 6978.752942 7049.921821 1.021660698 1.094972114 0.904169129 1.021133386 1.231507277 1.055851494 1.012851291 1.047327472 0.989905012 1 12.78339154 -8.054646964 1.609452364 0.995298473 1.052828357 0.068303642 0.077188322 1.281677938 5.932783793 0.073983649 0.023957561 8.82E-09 8.054646964 0.057529884 TLGTPTQPGST(ph)PR ddPTM_A459_MK2206_30min_R2 1 TLGTPTQPGSTPR 13 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 TLGTPTQPGS(0.037)T(0.963)PR 142.95 0.0017501 9702700 40673 43676 41671 42854 48350 42243 44741 33669 38081 43951 TRUE FALSE 43786.95615 41507.11335 43060.29034 39352.69112 46451.53606 43850.58697 38866.45296 38069.6539 41393.21655 42516.88247 1.02987222 0.976250161 1.012780991 0.925578002 1.092543323 1.031368821 0.914141647 0.895400878 0.9735713 1 15.3757482 -7.260863569 24.99959968 0.937061862 1.009651502 0.298759891 0.048477308 62.7584769 2724800.299 0.019448214 0.014148683 5.48E-08 7.260863569 0.072589641 TLHCEGT(ph)EINSDDEQESKEVEETATAK ddPTM_A459_MK2206_30min_R1 1 TLHCEGTEINSDDEQESKEVEETATAK 27 1 Q9BPX3;H0Y9Z8 Q9BPX3 NCAPG Condensin complex subunit 3 1 T(0.001)LHCEGT(0.593)EINS(0.403)DDEQES(0.002)KEVEETATAK 94.163 6.03E-06 12216000 721.32 671.82 559.4 516.39 432.87 615.14 451.43 519.15 417.68 442.41 TRUE FALSE 659.9679462 628.0843959 521.4294866 556.1624473 415.6278713 649.9686952 421.3159284 514.6111263 461.0993307 497.2190908 1.327318195 1.26319445 1.048691605 1.118546044 0.835904894 1.307207843 0.847344634 1.034978616 0.927356449 1 8.95773788 -5.118426636 1.184863192 1.0027067 1.402933554 0.442216754 0.127938847 0.841046168 1.484741543 0.038650513 0.359971351 7.61E-06 5.118426636 0.400226854 TLHCEGT(ph)EINSDDEQESKEVEETATAK ddPTM_A459_MK2206_30min_R2 1 TLHCEGTEINSDDEQESKEVEETATAK 27 1 Q9BPX3;H0Y9Z8 Q9BPX3 NCAPG Condensin complex subunit 3 1 T(0.001)LHCEGT(0.356)EINS(0.314)DDEQES(0.327)KEVEET(0.002)ATAK 65.213 0.0018111 28712000 31465 52987 55048 55775 61858 41595 56771 41173 54472 48620 TRUE FALSE 33873.98459 50355.74263 56883.27285 51218.00408 59429.14411 43177.92687 49316.89951 46554.45247 59209.8761 47033.53338 0.720209224 1.070634907 1.209419509 1.088967815 1.263548363 0.918024307 1.04854762 0.989814056 1.258886412 1 15.5214021 -4.764785499 5.290290322 1.097107791 0.700587663 0.509087004 0.110435753 0.126989371 10.4286435 0.027140028 0.185162574 1.72E-05 4.764785499 -0.396520128 TLHCEGTEINS(ph)DDEQESK ddPTM_A459_MK2206_30min_R1 6 TLHCEGTEINSDDEQESK 18 0 Q9BPX3;H0Y9Z8 Q9BPX3 NCAPG Condensin complex subunit 3 1 TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK 241.08 2.82E-25 213776000 25924.5 30013.3 28337.2 20941.14 19948.49 19784.16 26387.7 22103.3 29656.8 32392.7 TRUE FALSE 23719.48514 28059.42871 26413.74982 22554.03023 19153.8994 20904.32204 24627.42468 21910.05318 32739.73049 36405.75223 0.651531247 0.770741627 0.725537812 0.619518314 0.526122885 0.574203821 0.6764707 0.601829432 0.89930103 1 15.1518788 -8.391974169 3.706434402 0.995606051 0.644367127 0.769117939 0.067995377 0.116630542 2.69094973 0.07397205 0.019611745 4.06E-09 8.391974169 -0.351238924 TLHCEGTEINS(ph)DDEQESK ddPTM_A459_MK2206_30min_R2 4 TLHCEGTEINSDDEQESK 18 0 Q9BPX3;H0Y9Z8 Q9BPX3 NCAPG Condensin complex subunit 3 1 TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK 210.46 7.56E-12 969650000 1254830 966384 1069535 978387 1014280 753201 1182970 907592 678739 1242080 TRUE FALSE 1350900.75 918394.7758 1105192.763 898449.6524 974454.2709 781864.5918 1027644.618 1026217.391 737774.4913 1201551.031 1.124297441 0.764341049 0.919805097 0.747741568 0.810996991 0.650712763 0.855265063 0.854077242 0.614018441 1 20.19646649 TLHCEGTEINS(ph)DDEQESKEVEETATAK ddPTM_A459_MK2206_30min_R1 4 TLHCEGTEINSDDEQESKEVEETATAK 27 1 Q9BPX3;H0Y9Z8 Q9BPX3 NCAPG Condensin complex subunit 3 1 T(0.006)LHCEGT(0.031)EINS(0.887)DDEQES(0.064)KEVEET(0.01)AT(0.002)AK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGT(0.008)EINS(0.987)DDEQES(0.005)KEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK 101.33 3.95E-07 152232000 7720.61 8062.63 8462.69 8161.12 7613.95 6303.4 6142.37 8149.55 6335.68 5088.72 TRUE FALSE 7063.931577 7537.751322 7888.266181 8789.690876 7310.670249 6660.293061 5732.623705 8078.299344 6994.296608 5719.149051 1.235136821 1.317984766 1.379272705 1.536887883 1.27827937 1.164560147 1.002356059 1.412500229 1.222961064 1 12.48158479 -6.552610865 5.296382567 1.179076558 1.36980669 0.35652223 0.130009614 0.230866848 17.4042623 0.044460321 0.045419548 2.80E-07 6.552610865 0.190730132 TLHCEGTEINS(ph)DDEQESKEVEETATAK ddPTM_A459_MK2206_30min_R2 6 TLHCEGTEINSDDEQESKEVEETATAK 27 1 Q9BPX3;H0Y9Z8 Q9BPX3 NCAPG Condensin complex subunit 3 1 TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGT(0.079)EINS(0.919)DDEQES(0.001)KEVEETATAK;TLHCEGT(0.069)EINS(0.931)DDEQESKEVEETATAK;T(0.014)LHCEGT(0.011)EINS(0.845)DDEQES(0.115)KEVEET(0.013)AT(0.002)AK;TLHCEGT(0.006)EINS(0.994)DDEQESKEVEETATAK 103.03 2.36E-07 309491000 305113 526523 523371 520431 616671 395341 568844 412632 485625 504770 TRUE FALSE 328472.6859 500376.6335 540819.9279 477910.1225 592457.398 410385.9788 494154.0995 466564.4192 527863.7847 488299.3962 0.672687061 1.024733263 1.107558052 0.978723558 1.21330766 0.840439251 1.011989987 0.955488421 1.081024856 1 18.89740647 -4.761302593 24.9989809 1.023353213 0.672686676 0.559699953 0.09339728 2.371005619 431788.4813 0.022443222 0.125868713 1.73E-05 4.761302593 -0.350666538 TLHPAVHAGILAR ddPTM_A459_MK2206_30min_R1 1 TLHPAVHAGILAR 13 0 P31939-2;P31939;C9JLK0 P31939-2 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase 0 88.803 0.013147 5443800 3128 3221 3015.5 2457.2 3081.4 2916.6 3113.3 2918.3 2661.6 2585.1 FALSE TRUE 2861.947174 3011.312315 2810.816262 2646.45397 2958.661313 3081.735372 2905.617438 2892.785611 2938.282845 2905.361705 0.9850571 1.03646727 0.967458288 0.91088623 1.018345257 1.060706268 1.000088021 0.995671419 1.011331167 1 11.50450207 TLHPDLGTDK ddPTM_A459_MK2206_30min_R2 1 TLHPDLGTDK 10 0 P00338;P00338-3;P00338-5;P00338-4;P00338-2 P00338 LDHA L-lactate dehydrogenase A chain 0 106.62 0.016566 7816000 144130 106890 112720 119440 91045 84455 120930 103950 76620 127940 FALSE TRUE 155164.7036 101581.998 116478.0285 109681.3699 87470.11584 87668.99421 105051.7457 117536.6219 83284.2691 123765.3283 1.253700901 0.820762967 0.941120023 0.886204331 0.706741678 0.708348577 0.84879786 0.949673253 0.672920844 1 16.91724769 -2.704737576 1.467330339 0.824923051 199.9613185 0.5572515 0.109236892 483.7417493 2.949455907 0.030339836 322415.9848 0.001973615 2.704737576 199.1363955 TLHSCSVR ddPTM_A459_MK2206_30min_R2 1 TLHSCSVR 8 0 E9PP73;P53618 E9PP73 COPB1 Coatomer subunit beta 0 139.97 0.0033313 834860 4669.3 7137.3 6090 7800.3 6957.4 7269.6 7547.7 5273.2 8500.4 6259.4 FALSE TRUE 5026.785198 6782.872061 6293.03756 7162.990538 6684.217518 7546.249722 6556.677924 5962.425346 9239.749427 6055.156291 0.830166053 1.12018117 1.039285736 1.182957168 1.10388852 1.246251849 1.082825547 0.984685623 1.525930791 1 12.56394848 -4.162388899 1.219004667 1.152444145 3.52E-11 0.284996582 0.148603164 7.501358147 3.287139488 0.041653456 15.78815023 6.88E-05 4.162388899 -1.152444145 TLHSDDEGTVLDDSR ddPTM_A459_MK2206_30min_R2 1 TLHSDDEGTVLDDSR 15 0 O00170;E9PMH2 O00170 AIP AH receptor-interacting protein 0 226.88 1.55E-13 7980100 31036 34654 28357 38756 37149 34004 38551 33127 29736 29742 FALSE TRUE 33412.14002 32933.13275 29302.40823 35589.51083 35690.3436 35298.04605 33489.20739 37456.81264 32322.38353 28771.52098 1.1612921 1.14464344 1.018451831 1.236970088 1.240474691 1.226839766 1.163970699 1.301871134 1.123415879 1 14.81235387 -5.787849109 24.99996952 1.200574298 1.111780415 0.125409925 0.085809416 343.476633 325140.4922 0.022791776 0.033817352 1.63E-06 5.787849109 -0.088793883 TLIPS(ph)PPPRPK ddPTM_A459_MK2206_30min_R1 1 TLIPSPPPRPK 11 1 J3KSG3;J3KSS7;Q9NZ52-3;Q9NZ52-4;Q9NZ52-2;Q9NZ52 J3KSG3 GGA3 ADP-ribosylation factor-binding protein GGA3 1 T(0.119)LIPS(0.881)PPPRPK 75.911 0.028805 50704000 4838.7 4582.5 4584.3 4351.4 5034.4 5031.5 4353 4071.6 3957.2 3519 TRUE FALSE 4427.143156 4284.178417 4273.130489 4686.545582 4833.869187 5316.379182 4062.619312 4036.00243 4368.565101 3954.960287 1.119390041 1.08324183 1.080448394 1.184979176 1.222229513 1.344230737 1.027221266 1.020491266 1.104578753 1 11.94944749 TLLELVEAWLER ddPTM_A459_MK2206_30min_R1 1 TLLELVEAWLER 12 0 P48775 P48775 TDO2 "Tryptophan 2,3-dioxygenase" 0 72.321 0.032481 26471000 6713.7 7208.8 8045.1 6895.2 7672.9 7271.3 8370.1 7695.2 4575.7 6318 FALSE TRUE 6142.66456 6739.50581 7499.021027 7426.269499 7367.272145 7682.994722 7811.745901 7627.921678 5051.360389 7100.721538 0.865076109 0.949129715 1.056092819 1.045847166 1.037538524 1.082001974 1.1001341 1.074245995 0.711386915 1 12.79374992 -3.940134056 15.26333308 1.003037507 0.996391453 0 0.115576957 0 0 0.026485547 0 0.00011478 3.940134056 -0.006646054 TLLISS(ph)LSPALPAEHLEDR ddPTM_A459_MK2206_30min_R1 1 TLLISSLSPALPAEHLEDR 19 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 T(0.004)LLIS(0.228)S(0.69)LS(0.078)PALPAEHLEDR 64.349 0.017023 3370800 1124.7 1278.9 1404.3 1217.4 1471.4 1176.5 1179.2 1299.6 1063 1131.2 TRUE FALSE 1029.038359 1195.643378 1308.980029 1311.164359 1412.791022 1243.112413 1100.53772 1288.237734 1173.502654 1271.341596 0.809411383 0.940458002 1.029605287 1.031323417 1.111259969 0.977795753 0.865650682 1.013290007 0.923042759 1 10.312136 -4.822255021 3.017093756 0.994626266 0.788289135 0.444977933 0.062267481 0.338656575 4.756856863 0.017217733 0.162366228 1.51E-05 4.822255021 -0.206337131 TLLISSLS(ph)PALPAEHLEDR ddPTM_A459_MK2206_30min_R1 1 TLLISSLSPALPAEHLEDR 19 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 T(0.001)LLIS(0.039)S(0.426)LS(0.534)PALPAEHLEDR 95.344 0.0011475 4938400 2119.2 2234.4 1899 2101 2208.6 1887.4 2232.5 2528.3 1823 2035.2 TRUE FALSE 1938.950912 2088.940154 1770.101171 2262.819384 2120.626785 1994.262957 2083.573998 2506.19534 2012.507374 2287.335941 0.84768961 0.913263381 0.773870221 0.989281611 0.927116453 0.871871473 0.910917352 1.095683102 0.879847747 1 11.15945255 -6.671604285 0.434667799 0.996754855 0.842908375 0.254225477 0.073655616 1.875411562 0.725999118 0.071400446 0.119202696 2.13E-07 6.671604285 -0.15384648 TLLLGWGPY(ph)AILY(ph)LY(ph)AVIADVT(ph)SISPK ddPTM_A459_MK2206_30min_R1 1 TLLLGWGPYAILYLYAVIADVTSISPK 27 0 A0A494C063;A0A494C187;P47804;P47804-2 A0A494C063 RGR RPE-retinal G protein-coupled receptor 4 T(0.039)LLLGWGPY(0.75)AILY(0.801)LY(0.777)AVIADVT(0.736)S(0.736)IS(0.16)PK 41.166 0.02346 5114100 517.8 664.92 527.2 534.35 400.2 597.2 405.51 403.08 541.19 447.97 TRUE FALSE 473.7583909 621.6335871 491.4151329 575.5057296 384.2591866 631.0129479 378.4591678 399.5559141 597.4486372 503.4679056 0.940990251 1.234703504 0.976060494 1.14308325 0.76322479 1.253333015 0.751704654 0.793607516 1.186666778 1 8.975756004 TLLS(ph)PSSIK ddPTM_A459_MK2206_30min_R2 2 TLLSPSSIK 9 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 TLLS(0.767)PS(0.207)S(0.025)IK;T(0.077)LLS(0.573)PS(0.265)S(0.086)IK 104.43 0.014351 32084000 294080 297240 294100 311250 214390 204540 284980 213540 190538 252570 TRUE FALSE 316594.9909 282479.4938 303905.1472 285819.8794 205971.9714 212323.913 247561.7837 241450.4112 207110.6508 244328.6616 1.29577508 1.156145546 1.243837482 1.169817235 0.843011909 0.869009439 1.013232676 0.98821976 0.84767235 1 17.89846359 -6.152207482 5.065547834 0.928371857 1.221031077 0.820805893 0.066565412 0.095580713 3.681212335 0.020255197 0.026446516 7.04E-07 6.152207482 0.292659221 TLLSESSSQSSKS(ph)PSLSSK ddPTM_A459_MK2206_30min_R1 1 TLLSESSSQSSKSPSLSSK 19 1 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 T(0.027)LLS(0.009)ES(0.018)S(0.018)S(0.004)QS(0.003)S(0.009)KS(0.611)PS(0.284)LS(0.013)S(0.003)K 92.8 0.001194 96070000 3012.5 2408.2 2878.3 2405.4 2733.7 2302.1 2694.1 3362 2588.9 2249.2 TRUE FALSE 2756.271056 2251.425742 2682.929015 2590.664325 2624.81094 2432.442913 2514.381505 3332.606388 2858.025419 2527.847877 1.090362708 0.890649221 1.061349079 1.024849774 1.03835795 0.962258423 0.994672792 1.318357176 1.130616065 1 11.30369393 -7.71732475 24.99762097 1.168365438 1.006344635 0.338345916 0.088986845 117.5892495 66631.96691 0.039259096 0.022666094 1.92E-08 7.71732475 -0.162020803 TLLSESSSQSSKSPS(ph)LSSK ddPTM_A459_MK2206_30min_R1 1 TLLSESSSQSSKSPSLSSK 19 1 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 T(0.001)LLSES(0.002)S(0.006)S(0.002)QSSKS(0.017)PS(0.954)LS(0.013)S(0.003)K 97.57 0.00084281 98784000 5061.2 4461.7 5415.2 4610.2 5412.2 4203.6 5327.4 5508.6 4820.8 3772.1 TRUE FALSE 4630.718363 4171.242519 5047.631312 4965.278403 5196.620613 4441.604199 4972.018866 5460.438891 5321.939411 4239.416226 1.092300948 0.983919081 1.190643014 1.171217483 1.225786839 1.047692409 1.172807434 1.288016699 1.255347229 1 12.0496499 -5.272231869 24.26429068 1.177144799 1.038110014 0.263546077 0.086615193 528.2313014 1187601.889 0.022601921 0.047853375 5.34E-06 5.272231869 -0.139034785 TLLSESSSQSSKSPS(ph)LSSK ddPTM_A459_MK2206_30min_R2 2 TLLSESSSQSSKSPSLSSK 19 1 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 T(0.007)LLS(0.268)ES(0.165)S(0.165)S(0.036)QS(0.001)S(0.001)KS(0.035)PS(0.298)LS(0.02)S(0.005)K;TLLSES(0.002)S(0.002)SQSSKS(0.005)PS(0.988)LS(0.002)SK 111.7 0.00033165 216680000 157355 226863 176953 231016 205423 191477 242087 158770 204737 196127 TRUE FALSE 169402.2198 215597.3133 182852.5247 212141.2538 197357.0609 198763.7914 210300.6861 179521.7841 222544.6542 189727.3921 0.892871704 1.136353117 0.963764498 1.118137194 1.04021385 1.047628333 1.108436077 0.946209096 1.172970607 1 17.53356846 -4.743074158 24.92279074 1.057047724 0.892871159 0.329156882 0.071213528 1318.480695 1789166.236 0.015888595 0.528045345 1.81E-05 4.743074158 -0.164176565 TLLTGDGGGEATGS(ph)PLAQGK ddPTM_A459_MK2206_30min_R2 3 TLLTGDGGGEATGSPLAQGK 20 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;H0Y2S9;H0Y7E2 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 TLLTGDGGGEAT(0.01)GS(0.99)PLAQGK;TLLTGDGGGEAT(0.017)GS(0.983)PLAQGK;TLLTGDGGGEAT(0.082)GS(0.918)PLAQGK 155.94 1.75E-06 23793100 113081 138773 109534 141420 125097 110125 130952 95766 108731 127322 TRUE FALSE 121738.5683 131881.7346 113185.8089 129865.5336 120185.0632 114315.884 113757.8451 108282.945 118188.2258 123167.4936 0.98839852 1.070751144 0.918958449 1.054381557 0.975785572 0.928133558 0.923602826 0.879151973 0.959573199 1 16.91026202 -6.609057569 3.958149698 0.929818241 1.007224393 0.314226256 0.047870235 0.239533357 7.199945122 0.015538556 0.015614715 2.46E-07 6.609057569 0.077406152 TLMLPLTEGS(ph)LR ddPTM_A459_MK2206_30min_R1 2 TLMLPLTEGSLR 12 0 Q7L4E1-3;Q7L4E1 Q7L4E1-3 FAM73B Protein FAM73B 1 TLMLPLTEGS(1)LR;TLMLPLTEGS(1)LR 172.33 0.00022903 16840300 4555.4 4383.6 3721.7 4478.9 5864.5 4283.9 4748.6 4373.5 4405.6 4269.1 TRUE FALSE 4167.939309 4098.226843 3469.081373 4823.865654 5630.904547 4526.450716 4431.829558 4335.262951 4863.577886 4797.988338 0.868684752 0.854155232 0.723028305 1.005393368 1.173596964 0.943405944 0.923684938 0.903558459 1.013670218 1 12.22821394 -5.779724914 24.97253015 0.993090705 0.81917601 0.523831278 0.078374708 200.717287 274118.6755 0.023995958 0.035666953 1.66E-06 5.779724914 -0.173914695 TLNAETPKS(ph)SPLPAK ddPTM_A459_MK2206_30min_R2 1 TLNAETPKSSPLPAK 15 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 TLNAET(0.008)PKS(0.788)S(0.204)PLPAK 104.94 0.023042 8676100 30349 58877 50150 53868 71203 57659 70887 49802 69287 54394 TRUE FALSE 32672.54277 55953.2538 51821.97597 49466.81208 68407.21245 59853.25365 61579.45175 56311.2924 75313.45802 52619.12823 0.620925201 1.063363375 0.984850523 0.940091821 1.30004458 1.137480906 1.17028643 1.070167718 1.431294294 1 15.68329973 -4.235135394 0.670872863 1.176706418 2.21E-13 0.538590773 0.140655 4.853010451 0.978197945 0.058389442 5.144100336 5.82E-05 4.235135394 -1.176706418 TLNAETPKSS(ph)PLPAK ddPTM_A459_MK2206_30min_R1 1 TLNAETPKSSPLPAK 15 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 TLNAETPKS(0.075)S(0.925)PLPAK 194.58 0.00015461 19223000 2390.7 2222.6 2615.2 2597.4 2099.7 1730.8 1994.2 2608.8 2037.3 1290.8 TRUE FALSE 2187.358411 2077.908336 2437.68751 2797.452198 2016.064503 1828.7964 1861.170557 2585.991537 2249.084626 1450.714049 1.507780539 1.432334882 1.680336323 1.928327778 1.389704955 1.260618108 1.282934123 1.782564619 1.550329389 1 10.50254746 TLNAETPKSS(ph)PLPAK ddPTM_A459_MK2206_30min_R2 2 TLNAETPKSSPLPAK 15 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 TLNAET(0.001)PKS(0.111)S(0.888)PLPAK;TLNAET(0.001)PKS(0.368)S(0.631)PLPAK 80.508 0.015975 22368000 41912 80641 61505 74921 84620 74133 97336 78576 73641 90088 TRUE FALSE 45120.81494 76636.4852 63555.546 68799.71464 81297.39362 76954.18326 84555.66628 88846.15299 80046.16107 87148.43594 0.517746698 0.879378779 0.72927925 0.789454382 0.93286119 0.883024261 0.97024881 1.019480752 0.918503702 1 16.41118715 -3.852831675 0.343888144 0.999713381 1.41E-14 0.721954417 0.075657594 6.888870823 0.397632989 0.068432198 3.236302429 0.000140336 3.852831675 -0.999713381 TLNDELEIIEGMK ddPTM_A459_MK2206_30min_R1 3 TLNDELEIIEGMK 13 0 P10809;E7ESH4;E7EXB4 P10809 HSPD1 "60 kDa heat shock protein, mitochondrial" 0 ;; 170 0.0033117 10696100 6791.44 7733.77 6284.49 8003.34 8127.29 7936.01 7597.47 7384.41 6273.19 6364.47 FALSE TRUE 6213.792365 7230.300167 5857.916328 8619.758634 7803.562829 8385.340028 7090.656639 7319.848882 6925.310549 7152.948593 0.868703624 1.010813942 0.818951269 1.205063691 1.090957488 1.172291387 0.99129143 1.023333075 0.968175635 1 12.80432236 -5.751115386 24.9995432 1.067967155 0.910622067 0.437573186 0.085355724 210.2434271 509099.5901 0.023664916 0.040414911 1.77E-06 5.751115386 -0.157345088 TLNDELEIIEGMKFDR ddPTM_A459_MK2206_30min_R1 1 TLNDELEIIEGMKFDR 16 1 P10809;E7ESH4;E7EXB4 P10809 HSPD1 "60 kDa heat shock protein, mitochondrial" 0 106.35 0.0098853 5268200 1005.8 1464.4 1467 1502.2 1351.9 1012.2 873.98 1189.5 864.85 700.9 FALSE TRUE 920.2514283 1369.067294 1367.424127 1617.899704 1298.05096 1069.509889 815.6783889 1179.100327 954.7542524 787.7327835 1.168227916 1.737984406 1.735898462 2.053868695 1.647831584 1.35770646 1.035475996 1.496827797 1.212028079 1 9.621562508 -6.826280979 3.635868586 1.225075155 1.701156762 0.47247122 0.239709478 0.216423884 5.73564895 0.089230102 0.080067209 1.49E-07 6.826280979 0.476081607 TLNGVSS(ph)PPHPSPK ddPTM_A459_MK2206_30min_R2 2 TLNGVSSPPHPSPK 14 0 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 T(0.01)LNGVS(0.037)S(0.953)PPHPSPK;TLNGVS(0.095)S(0.905)PPHPSPK 95.755 0.012276 16288100 26366.9 64114 46389 84691 80999 92825 90893 51878 72347 51663 TRUE FALSE 28385.57014 60930.19199 47935.58611 77771.47439 77818.57227 96357.52042 78958.63992 58658.63272 78639.61129 49977.24054 0.567969937 1.219158788 0.959148316 1.556137825 1.557080212 1.928028026 1.579891948 1.173706913 1.57350847 1 15.60898363 -4.734685327 0.936389334 1.505106146 0.109907576 0.479160496 0.274098771 1.964361829 1.279127229 0.095434206 2.861345878 1.84E-05 4.734685327 -1.395198569 TLNMTT(ph)SPEEK ddPTM_A459_MK2206_30min_R1 3 TLNMTTSPEEK 11 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 TLNMT(0.313)T(0.343)S(0.343)PEEK;T(0.003)LNMT(0.158)T(0.608)S(0.231)PEEK;TLNMT(0.141)T(0.743)S(0.116)PEEK 184.31 6.05E-05 37542000 11366.8 12759.8 12890.2 12252.2 9724.9 8568.9 10056.4 10488 10796.9 10394.8 TRUE FALSE 10399.99397 11929.1347 12015.24914 13195.86657 9337.53664 9054.063713 9385.555905 10396.30452 11919.27639 11682.5863 0.890213323 1.021103923 1.028475102 1.129532984 0.799269648 0.775005078 0.803379976 0.889897515 1.020260076 1 13.51207207 -6.271762737 24.99645837 0.866585973 1.01839679 0.329380237 0.093682004 783.7618936 1897757.982 0.030208561 0.034633238 5.35E-07 6.271762737 0.151810817 TLNMTT(ph)SPEEK ddPTM_A459_MK2206_30min_R2 2 TLNMTTSPEEK 11 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 TLNMT(0.184)T(0.449)S(0.367)PEEK;TLNMT(0.255)T(0.501)S(0.244)PEEK 107.53 0.02454 2863300 55626 67012 62476 62473 60426 44783 68969 54813 51892 67208 TRUE FALSE 59884.76933 63684.28152 64558.91866 57368.75606 58053.37162 46487.24845 59913.28745 61977.2473 56405.47236 65015.00846 0.921091464 0.979532004 0.992984854 0.882392503 0.892922619 0.715023339 0.921530103 0.953276001 0.867576175 1 15.98848518 -5.773175654 24.62522428 0.882538077 0.966035691 0.177008302 0.07186295 279.6915988 586853.1255 0.020717269 0.031022547 1.69E-06 5.773175654 0.083497615 TLNMTTS(ph)PEEK ddPTM_A459_MK2206_30min_R1 4 TLNMTTSPEEK 11 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 TLNMT(0.007)T(0.077)S(0.916)PEEK;TLNMT(0.017)T(0.261)S(0.722)PEEK;TLNMT(0.052)T(0.198)S(0.75)PEEK;TLNMT(0.184)T(0.184)S(0.631)PEEK 190.34 1.98E-05 130648000 21041.3 24385.2 25379.5 21626.7 17435 15172.4 17559 18924.6 21219.4 19101.6 TRUE FALSE 19251.62694 22797.71905 23656.81025 23292.39218 16740.52703 16031.44818 16387.67115 18759.14422 23425.23256 21468.05042 0.896757114 1.061937093 1.10195429 1.084979387 0.77978795 0.746758456 0.763351624 0.873816851 1.091167205 1 14.38990356 -6.254689296 24.98847849 0.857428659 1.042912508 0.315812692 0.113725209 613.8514693 2272447.262 0.035614229 0.044892945 5.56E-07 6.254689296 0.18548385 TLNMTTS(ph)PEEK ddPTM_A459_MK2206_30min_R2 1 TLNMTTSPEEK 11 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 TLNMT(0.296)T(0.297)S(0.408)PEEK 165.51 0.00064871 39469000 87460 94187 94628 88814 86473 66333 106730 75890 69897 104950 TRUE FALSE 94156.00485 89509.81054 97782.85029 81557.6121 83077.63553 68857.3488 92716.22279 85809.08357 75976.51472 101525.4901 0.927412463 0.881648643 0.963135959 0.803321531 0.818293371 0.678227199 0.91323098 0.845197433 0.748349155 1 16.63148247 -5.770998754 24.99879977 0.819783656 0.919823987 0.203519469 0.084060344 279.4005568 730663.6703 0.022813342 0.034331473 1.69E-06 5.770998754 0.100040331 TLNPDS(ph)PR ddPTM_A459_MK2206_30min_R1 1 TLNPDSPR 8 0 Q8TAT5 Q8TAT5 NEIL3 Endonuclease 8-like 3 1 TLNPDS(1)PR 91.701 0.027107 0 3464.5 3137.7 2513.6 2296 4424 3973.1 4384.6 3811.5 2112.5 2462.1 TRUE FALSE 3169.826082 2933.43516 2342.983835 2472.838318 4247.782712 4198.053489 4092.111334 3778.176457 2332.101935 2767.123536 1.145531105 1.06010271 0.846721805 0.893649411 1.535089654 1.517118204 1.478832181 1.365380478 0.842789237 1 11.43417134 -6.24911611 24.951852 1.32894801 0.981774246 0.295219758 0.224768547 883.5063632 1788901.487 0.068870891 0.088259421 5.63E-07 6.24911611 -0.347173764 TLPGACGS(ph)PQK ddPTM_A459_MK2206_30min_R2 2 TLPGACGSPQK 11 0 Q9UBZ9-2;Q9UBZ9 Q9UBZ9-2 REV1 DNA repair protein REV1 1 TLPGACGS(1)PQK;TLPGACGS(1)PQK 139.74 0.0011433 16892700 76684 86927 85885 77694 82334 70972 100491 86197 66300 97978 TRUE FALSE 82554.986 82610.33158 88748.36303 71346.15167 79101.15346 73672.88919 87296.41099 97463.24386 72066.65416 94780.98588 0.871007884 0.871591816 0.936351972 0.752747516 0.834567743 0.777296084 0.92103295 1.028299537 0.760349278 1 16.53231005 -7.408085776 8.327533479 0.931303077 0.842240479 0.214875136 0.081357991 0.479093682 31.64664073 0.033486905 0.022504179 3.91E-08 7.408085776 -0.089062598 TLPS(ph)PIDAK ddPTM_A459_MK2206_30min_R2 4 TLPSPIDAK 9 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 T(0.074)LPS(0.926)PIDAK;T(0.007)LPS(0.993)PIDAK;T(0.432)LPS(0.568)PIDAK;T(0.252)LPS(0.748)PIDAK 107.11 0.012777 39517300 658130 807970 748590 782110 884950 652230 948220 674230 731030 845150 TRUE FALSE 708516.9388 767847.3847 773547.617 718209.1112 850202.4165 677051.0697 823717.575 762354.176 794613.668 817572.8247 0.866610187 0.939179192 0.946151332 0.878465 1.039910318 0.828123256 1.007515845 0.932460269 0.971917906 1 19.64098772 -1.522878748 0.070445749 1.067029484 0.642421431 0.188556348 0.057632248 445.9579639 2.327590144 2.43716435 18.76479988 0.03 1.522878748 -0.424608053 TLQRLS(ph)SGFDDIDLPSAVK ddPTM_A459_MK2206_30min_R1 2 TLQRLSSGFDDIDLPSAVK 19 1 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 TLQRLS(0.497)S(0.497)GFDDIDLPS(0.005)AVK;T(0.064)LQRLS(0.682)S(0.253)GFDDIDLPSAVK 92.716 0.0012042 135851000 14168.8 18432.2 18992.7 19834.8 20994 17479.3 15326.7 18357.6 12064.1 6635.5 TRUE FALSE 12963.66916 17232.26043 17703.52844 21362.47973 20157.76452 18468.96286 14304.28381 18197.10144 13318.20637 7457.555835 1.738326798 2.310711553 2.373904914 2.864541708 2.702998807 2.476543692 1.918092754 2.440089198 1.785867469 1 12.86448716 -8.716564301 1.035132623 0.995035679 2.40499923 0.635540229 0.317174249 0.532112994 1.141694755 0.321420214 0.103716197 1.92E-09 8.716564301 1.409963551 TLQRLS(ph)SGFDDIDLPSAVK ddPTM_A459_MK2206_30min_R2 1 TLQRLSSGFDDIDLPSAVK 19 1 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 T(0.124)LQRLS(0.805)S(0.071)GFDDIDLPSAVK 85.17 0.0021207 5532700 9715 16690 13881 16061 19761 16729 16758 13278 17146 12790 TRUE FALSE 10458.78787 15861.19887 14343.78561 14748.76492 18985.08385 17365.63382 14557.65447 15013.48019 18637.32809 12372.66335 0.845314188 1.281955099 1.159312689 1.19204447 1.534437923 1.403548559 1.176598285 1.213439643 1.50633114 1 13.59486847 -4.348719298 1.666100044 1.292712102 3.12E-19 0.38492856 0.159244291 3.889549322 3.999613395 0.043439621 11.56676014 4.48E-05 4.348719298 -1.292712102 TLQRLSS(ph)GFDDIDLPSAVK ddPTM_A459_MK2206_30min_R2 1 TLQRLSSGFDDIDLPSAVK 19 1 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 TLQRLS(0.396)S(0.603)GFDDIDLPSAVK 110.6 0.00035675 4732200 26971 57999 47037 64675 72259 69383 68076 48136 68213 39223 TRUE FALSE 29035.9205 55118.854 48605.1901 59390.84561 69421.74859 72023.41868 59137.53943 54427.54048 74146.04344 37943.15672 0.765247887 1.45266917 1.281000167 1.565258422 1.829625012 1.898192583 1.558582483 1.434449455 1.954134812 1 15.21155209 -4.49177813 1.040047548 1.631278259 5.05E-12 0.42457034 0.275466075 2.837445966 1.674987284 0.084939099 5.927983524 3.22E-05 4.49177813 -1.631278259 TLQTDSIDSFETQRT(ph)PR ddPTM_A459_MK2206_30min_R1 7 TLQTDSIDSFETQRTPR 17 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFET(0.002)QRT(0.998)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFET(0.01)QRT(0.99)PR 198.61 9.52E-08 422427000 27660.3 26175.6 26452.2 23631.3 29449.2 26217.3 26590.2 24519.1 21256.1 18261.4 TRUE FALSE 25307.64623 24471.56368 24656.69836 25451.38682 28276.176 27701.70087 24816.41627 24304.73209 23465.74766 20523.7601 1.233090141 1.192352842 1.201373347 1.24009376 1.377728831 1.349738096 1.209155445 1.184224137 1.143345447 1 14.32500745 -8.460702293 1.185799202 1.004398705 1.260568519 0.654060495 0.058402131 0.337265723 1.035205013 0.063995796 0.020227482 3.46E-09 8.460702293 0.256169814 TLQTDSIDSFETQRT(ph)PR ddPTM_A459_MK2206_30min_R2 5 TLQTDSIDSFETQRTPR 17 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFET(0.009)QRT(0.991)PR;TLQTDSIDSFET(0.001)QRT(0.999)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFET(0.074)QRT(0.926)PR 172.42 7.71E-07 500290400 274025 403025 323335 426838 421788 410276 404767 301830 371044 321002 TRUE FALSE 295004.5647 383011.3646 334114.8275 391963.97 405226.4838 425889.3407 351620.6067 341280.2173 403316.7364 310527.731 0.95001037 1.233420807 1.0759581 1.2622511 1.304960695 1.371501796 1.132332386 1.099032979 1.298810689 1 18.24436259 -4.757635028 24.89981972 1.205651344 0.950009984 0.302446818 0.112195379 131.7075621 861906.8331 0.027923818 0.203998338 1.75E-05 4.757635028 -0.25564136 TLRES(ph)DSAEGDEAESPEQQVR ddPTM_A459_MK2206_30min_R2 1 TLRESDSAEGDEAESPEQQVR 21 1 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3 DENND1A DENN domain-containing protein 1A 1 T(0.236)LRES(0.744)DS(0.02)AEGDEAESPEQQVR 134.4 2.21E-05 7362400 19793 19180 16712 18364 17642 15401 15510 13118 13987 15643 TRUE FALSE 21308.3673 18227.54909 17269.16974 16863.60246 16949.28644 15987.09585 13473.51837 14832.56764 15203.56398 15132.57019 1.4081129 1.204524338 1.141192112 1.11439116 1.120053383 1.056469301 0.890365496 0.980175043 1.004691456 1 13.88536942 -1.522878745 0.349063535 0.962914189 5.990517492 0.87039555 0.049204801 21.89417486 0.308416626 0.04553042 72.38021369 0.03 1.522878745 5.027603303 TLS(ph)ASAAEVAPR ddPTM_A459_MK2206_30min_R1 2 TLSASAAEVAPR 12 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 T(0.003)LS(0.992)AS(0.004)AAEVAPR;T(0.09)LS(0.821)AS(0.09)AAEVAPR 114.87 0.005396 17682500 5042.7 4545.6 4687.4 4056.2 4670.3 3534.5 3759.6 3488.4 2908.1 2603.7 TRUE FALSE 4613.791885 4249.680614 4369.232348 4368.609227 4484.272061 3734.620336 3508.803944 3457.901287 3210.407402 2926.266013 1.576682319 1.45225369 1.493108394 1.492895454 1.532421195 1.276240888 1.199072104 1.181677015 1.097100328 1 11.51484521 -7.265511519 0.859496865 1.047110504 1.522622508 0.927112185 0.052286876 0.158282814 0.227666165 0.042679029 0.025084303 5.43E-08 7.265511519 0.475512004 TLS(ph)ASAAEVAPR ddPTM_A459_MK2206_30min_R2 1 TLSASAAEVAPR 12 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 T(0.034)LS(0.74)AS(0.225)AAEVAPR 97.957 0.015725 4491500 19352 26294 25613 23505 22542 24336 25157 17901 18122 25114 TRUE FALSE 20833.604 24988.2782 26466.92464 21584.56631 21656.88782 25262.12353 21853.85568 20240.72216 19698.2188 24294.53224 0.857542915 1.028555642 1.089418984 0.888453669 0.891430533 1.039827533 0.899538031 0.833138995 0.810808729 1 14.56834403 -7.508104695 21.21075565 0.866451929 0.967621389 0.175787471 0.08366135 137.1258211 196874.1204 0.03653219 0.023551244 3.10E-08 7.508104695 0.101169459 TLS(ph)DDLDEAAK ddPTM_A459_MK2206_30min_R1 1 TLSDDLDEAAK 11 0 A0A087WV29;Q9H0A0-2;Q9H0A0 A0A087WV29 NAT10 N-acetyltransferase 10 1 T(0.015)LS(0.985)DDLDEAAK 88.803 0.030131 1137300 1004.6 1142.1 1034.2 952.21 691.7 908.56 935.36 791.99 1050 1107.3 TRUE FALSE 919.1534946 1067.749082 964.0013854 1025.549379 664.1481243 960.001882 872.9638411 785.0657149 1159.151257 1244.480684 0.738583979 0.85798767 0.774621413 0.824078182 0.533674916 0.77140762 0.701468374 0.630838008 0.931433708 1 10.28132812 -8.421584186 5.099449784 0.997655578 0.732665865 0.53740316 0.08871622 0.163784171 6.017136433 0.087975724 0.022897255 3.79E-09 8.421584186 -0.264989713 TLS(ph)DESIYNSQR ddPTM_A459_MK2206_30min_R1 2 TLSDESIYNSQR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 T(0.041)LS(0.959)DESIYNSQR;T(0.03)LS(0.97)DESIYNSQR 274.39 3.33E-34 58181000 2892.9 2692 3155.3 2109.29 2892 2426.38 2484.9 2738.9 2577.1 2071.19 TRUE FALSE 2646.843664 2516.750311 2941.127027 2271.747881 2776.805516 2563.759539 2319.136855 2714.954086 2844.998767 2327.784654 1.137065518 1.081178324 1.263487592 0.975926995 1.192896221 1.101373159 0.996284966 1.166325279 1.222191564 1 11.18474188 -5.751699095 24.99988635 1.100911415 1.152637181 0.097710614 0.090463731 637.0456425 1635053.482 0.024314598 0.041441404 1.77E-06 5.751699095 0.051725766 TLS(ph)DESIYNSQR ddPTM_A459_MK2206_30min_R2 1 TLSDESIYNSQR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 T(0.019)LS(0.976)DES(0.004)IYNSQR 101.38 0.012584 21604000 15685 23045 12311 20607 23577 16403 16730 14713 16894 19639 TRUE FALSE 16885.85566 21900.61881 12721.4426 18923.34218 22651.24852 17027.22766 14533.3309 16636.03962 18363.40958 18998.18104 0.888814336 1.152774509 0.669613716 0.996060736 1.192285118 0.89625568 0.764985389 0.875664864 0.966587777 1 14.21357368 -6.968238666 24.99975158 0.882758189 0.980281722 0.06232208 0.14646599 511.1815519 402356.1563 0.052278065 0.046104603 1.08E-07 6.968238666 0.097523533 TLS(ph)DESLCSGR ddPTM_A459_MK2206_30min_R1 4 TLSDESLCSGR 11 0 O60292;M0R2Q7 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.001)LS(0.679)DES(0.32)LCSGR;T(0.135)LS(0.863)DES(0.002)LCSGR;T(0.001)LS(0.624)DES(0.376)LCSGR;T(0.047)LS(0.492)DES(0.461)LCSGR 202 1.85E-05 333709000 8309 8082 8321.6 6686 7514.5 6978.4 7681.6 6794.1 7393.3 6654.1 TRUE FALSE 7602.275918 7555.860331 7756.752977 7200.956878 7215.181553 7373.510977 7169.17448 6734.6999 8161.859992 7478.460144 1.016556319 1.010349749 1.037212585 0.962892994 0.96479508 0.985966474 0.958643135 0.900546338 1.091382428 1 12.86852553 -5.765088705 24.99544285 0.975109597 1.020270573 0.136377019 0.04554392 160.0204204 1096040.553 0.012197935 0.018909526 1.72E-06 5.765088705 0.045160976 TLS(ph)DESLCSGR ddPTM_A459_MK2206_30min_R2 3 TLSDESLCSGR 11 0 O60292;M0R2Q7 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.013)LS(0.974)DES(0.013)LCSGR;TLS(0.995)DES(0.005)LCSGR;T(0.075)LS(0.879)DES(0.046)LCSGR 176.87 6.79E-05 333568000 48796 53293 53749 58919 57489 60271 64088 48591 46907 53428 TRUE FALSE 52531.85928 50646.54712 55540.96483 54105.12923 55231.693 62564.65514 55673.16862 54942.01054 50986.88607 51684.64874 1.016391918 0.979914701 1.074612408 1.04683171 1.068628584 1.210507504 1.077170301 1.063023778 0.986499615 1 15.65744822 -5.269694816 23.93010914 1.073142275 0.998153309 0.172517896 0.057640813 492.0688168 1426370.51 0.015731772 0.033705216 5.37E-06 5.269694816 -0.074988966 TLS(ph)DPPSPLPHGPPNK ddPTM_A459_MK2206_30min_R1 2 TLSDPPSPLPHGPPNK 16 0 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2 H0YBF7 ASAP1 "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1" 1 T(0.195)LS(0.75)DPPS(0.055)PLPHGPPNK;T(0.448)LS(0.55)DPPS(0.002)PLPHGPPNK 89.669 0.0085812 27274000 9816.5 8181.8 9403.3 7875.4 13388.5 12253.5 13204.5 12127.8 8431.2 8075.6 TRUE FALSE 8981.555127 7649.163333 8765.030195 8481.964673 12855.20769 12947.28258 12323.6519 12021.76792 9307.653411 9076.066296 0.98958677 0.842783986 0.965730076 0.934541948 1.416385389 1.42653019 1.357818629 1.324557086 1.025516243 1 13.14785143 -6.24716845 23.83496075 1.288066419 0.929031529 0.546629502 0.143607978 305.7518822 510658.4014 0.04250145 0.054569238 5.66E-07 6.24716845 -0.35903489 TLS(ph)DPPSPLPHGPPNK ddPTM_A459_MK2206_30min_R2 2 TLSDPPSPLPHGPPNK 16 0 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2 H0YBF7 ASAP1 "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1" 1 T(0.001)LS(0.998)DPPSPLPHGPPNK;TLS(0.996)DPPS(0.004)PLPHGPPNK 183 8.91E-07 4543800 23047 38624 37914 56427 63219 62227 66091 44058 57114 44159 TRUE FALSE 24811.49604 36705.98832 39178.03384 51816.7336 60736.70441 64595.09209 57413.17231 49816.53187 62081.67248 42718.09545 0.580819341 0.859260881 0.917129695 1.212992599 1.421802723 1.512124813 1.344001218 1.16616931 1.453287461 1 15.38255971 -5.559598096 1.520681411 1.337436642 0.667254638 0.72473109 0.15060412 0.220219688 0.973907285 0.046724726 0.140577293 2.76E-06 5.559598096 -0.670182004 TLS(ph)GSGSGSGSSYSGSSSR ddPTM_A459_MK2206_30min_R2 2 TLSGSGSGSGSSYSGSSSR 19 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 T(0.013)LS(0.865)GS(0.123)GSGSGSSYSGSSSR;T(0.021)LS(0.874)GS(0.1)GS(0.006)GSGSSYSGSSSR 260.96 2.35E-47 15470800 13771.6 17138.2 15140.2 13811.1 17240.9 15728.2 19686.6 16319.7 19314.8 17410.1 TRUE FALSE 14825.96428 16287.14191 15644.96671 12682.68895 16563.93564 16326.74767 17101.72577 18452.74082 20994.76639 16842.00986 0.880296616 0.967054529 0.92892516 0.753038922 0.983489249 0.969406134 1.015420719 1.095637693 1.246571316 1 14.03977669 -7.340347698 1.331421765 1.130375514 0.89880776 0.562518069 0.081083419 0.324877801 1.111875869 0.053124104 0.028820363 4.57E-08 7.340347698 -0.231567753 TLS(ph)INEEEPEGGFSK ddPTM_A459_MK2206_30min_R1 3 TLSINEEEPEGGFSK 15 0 H0YDJ2;E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 H0YDJ2 PPFIBP2 Liprin-beta-2 1 T(0.381)LS(0.619)INEEEPEGGFSK;T(0.183)LS(0.817)INEEEPEGGFSK;T(0.001)LS(0.999)INEEEPEGGFSK 267.38 9.18E-45 38645400 8618.2 9079.2 8217.9 7012.1 6975.1 5693.5 6413.5 6555.1 5188.3 5011.9 TRUE FALSE 7885.176834 8488.14243 7660.091844 7552.173157 6697.266997 6015.86105 5985.667117 6497.789452 5727.642352 5632.81201 1.39986508 1.506910299 1.359905467 1.34074653 1.188973995 1.068003164 1.062642798 1.153560502 1.016835346 1 12.45963961 -6.246500905 1.24867588 1.061561823 1.448170797 0.916016811 0.049409372 0.117531334 0.374215693 0.019381916 0.028372467 5.67E-07 6.246500905 0.386608974 TLS(ph)INEEEPEGGFSK ddPTM_A459_MK2206_30min_R2 1 TLSINEEEPEGGFSK 15 0 H0YDJ2;E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 H0YDJ2 PPFIBP2 Liprin-beta-2 1 T(0.159)LS(0.84)INEEEPEGGFS(0.001)K 161.75 0.00011771 11994000 48556 58528 48144 49876 49210 45824 49809 30815 36401 42873 TRUE FALSE 52273.48469 55621.58463 49749.09693 45800.97125 47277.76814 47567.86443 43269.01847 34842.6263 39567.09318 41474.05752 1.260389936 1.341117507 1.199523266 1.104328199 1.139935925 1.14693057 1.043279126 0.840106524 0.954020309 1 15.33992158 -6.561009835 0.567121869 0.919545727 1.311461956 0.767191183 0.068162394 0.464454815 0.323060729 0.059336747 0.086371265 2.75E-07 6.561009835 0.391916229 TLS(ph)MIEEEIR ddPTM_A459_MK2206_30min_R1 3 TLSMIEEEIR 10 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 T(0.007)LS(0.993)MIEEEIR;T(0.001)LS(0.999)MIEEEIR;TLS(1)MIEEEIR 134.38 0.0080084 6125500 4637.52 5206.18 5255.75 5323.88 4531.99 4498.44 5479.69 4487.85 3852.29 4330.91 TRUE FALSE 4243.074571 4867.256736 4899.004333 5733.92616 4351.471242 4753.137785 5114.149878 4448.613201 4252.749331 4867.455828 0.871723283 0.999959097 1.006481519 1.178012983 0.89399296 0.9765138 1.05068234 0.9139504 0.873710925 1 12.24895217 -7.784069329 24.60450987 0.920372919 0.999502245 0.11563181 0.084309914 401.5687247 436599.9041 0.046279477 0.02225797 1.64E-08 7.784069329 0.079129326 TLS(ph)MIEEEIR ddPTM_A459_MK2206_30min_R2 5 TLSMIEEEIR 10 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 T(0.01)LS(0.99)MIEEEIR;T(0.004)LS(0.996)MIEEEIR;TLS(1)MIEEEIR;T(0.017)LS(0.983)MIEEEIR;T(0.012)LS(0.988)MIEEEIR 157.03 0.00049893 35644340 13991.64 17025.71 16420.54 16832.38 17187.12 16524.02 17867.7 12537.2 15317.85 15074.33 TRUE FALSE 15062.85072 16180.238 16967.99261 15457.12071 16512.26731 17152.85316 15521.64953 14175.85509 16650.1689 14582.45585 1.032943345 1.109568798 1.163589507 1.059980628 1.132337892 1.176266422 1.064405728 0.972117127 1.14179457 1 13.83194609 -7.511994365 24.69218708 1.037825793 1.113758702 0.261122891 0.057213805 591.9771627 1342962.335 0.024551272 0.015363549 3.08E-08 7.511994365 0.075932908 TLS(ph)PEFNER ddPTM_A459_MK2206_30min_R1 1 TLSPEFNER 9 0 Q9BSJ8;Q9BSJ8-2 Q9BSJ8 ESYT1 Extended synaptotagmin-1 1 T(0.114)LS(0.886)PEFNER 120.77 0.0064738 5426400 2529.1 2398.2 2342.2 1652.8 2688.9 2576.9 2977.7 2350 2369.3 2457.5 TRUE FALSE 2313.986764 2242.076744 2183.21799 1780.098942 2581.795419 2722.801851 2779.063066 2329.454198 2615.597214 2761.953653 0.837807963 0.811772037 0.790461486 0.644507174 0.934771449 0.985824598 1.006194678 0.843408142 0.947009813 1 11.4314734 -6.399210377 8.301802316 0.950892535 0.775698589 0.660161859 0.063929364 0.198064985 12.53939126 0.020604727 0.023354271 3.99E-07 6.399210377 -0.175193946 TLS(ph)PGR ddPTM_A459_MK2206_30min_R2 1 TLSPGR 6 0 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 T(0.364)LS(0.636)PGR 93.195 0.042231 67277000 113830 114490 120060 124600 117510 104670 132330 116320 100770 129090 TRUE FALSE 122544.9123 108804.5931 124062.7405 114419.7814 112895.967 108653.2902 114954.912 131523.4234 109534.7924 124877.8039 0.981318605 0.871288489 0.993473112 0.916253953 0.904051508 0.870076882 0.920539187 1.053216979 0.8771358 1 16.93015755 -7.604877808 24.99999997 0.976482292 0.920198488 0.167803817 0.055314132 48.00785069 14632.39096 0.02465413 0.014234067 2.48E-08 7.604877808 -0.056283804 TLS(ph)PTPSAEGYQDVR ddPTM_A459_MK2206_30min_R1 3 TLSPTPSAEGYQDVR 15 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(0.147)LS(0.837)PT(0.016)PSAEGYQDVR;T(0.181)LS(0.819)PTPSAEGYQDVR;T(0.379)LS(0.621)PTPSAEGYQDVR 276.75 5.46E-55 257000900 4252.14 4191.68 4282.9 3377.98 4644 4424.24 4301.05 3926.86 3928.17 3426.33 TRUE FALSE 3890.473164 3918.80087 3992.188681 3638.152605 4459.019646 4674.736645 4014.134802 3892.527877 4336.517329 3850.809628 1.010300051 1.01765635 1.036714111 0.944776023 1.157943414 1.213962023 1.042413204 1.010833631 1.12613132 1 11.91094609 -6.261146987 24.99917892 1.09605298 1.005907864 0.308082876 0.065457516 36.05282355 3082514.583 0.020955343 0.025399464 5.48E-07 6.261146987 -0.090145117 TLS(ph)PTPSAEGYQDVR ddPTM_A459_MK2206_30min_R2 3 TLSPTPSAEGYQDVR 15 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;O14639-3;O14639-5;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(0.05)LS(0.95)PTPSAEGYQDVR;T(0.009)LS(0.99)PT(0.001)PSAEGYQDVR;T(0.032)LS(0.963)PT(0.005)PSAEGYQDVR 190.18 2.69E-05 75107000 72471 75981 62947 76620 78798 62451 72437 58143 65897 72292 TRUE FALSE 78019.43548 72207.89403 65045.62156 70359.9009 75703.99459 64827.61657 62925.93489 65742.48973 71628.60195 69933.11796 1.115629301 1.03252788 0.930111848 1.00610273 1.082519939 0.926994512 0.899801649 0.940076628 1.024244364 1 16.09368821 -6.777573859 24.97800883 0.950826852 1.026078763 0.298272279 0.056524728 330.268463 511289.8917 0.020985356 0.018562983 1.67E-07 6.777573859 0.075251911 TLS(ph)SPSLQTDGIAATPVPPPPPPK ddPTM_A459_MK2206_30min_R1 1 TLSSPSLQTDGIAATPVPPPPPPK 24 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 T(0.164)LS(0.607)S(0.164)PS(0.058)LQT(0.006)DGIAATPVPPPPPPK 140.71 2.65E-08 13399000 2927.5 2564.3 3543.3 2693.1 3264.6 2827.8 3058.1 2592.5 2896.1 2737 TRUE FALSE 2678.500752 2397.363604 3302.790668 2900.523029 3134.564069 2987.907592 2854.099729 2569.834046 3197.159959 3076.080223 0.870751267 0.779356658 1.073701083 0.942928278 1.019012458 0.971336043 0.927836572 0.835424911 1.039361696 1 11.58687741 -5.24620058 24.98240061 0.968762195 0.825053954 0.451872012 0.06618278 751.249314 1231588.98 0.016801731 0.044078447 5.67E-06 5.24620058 -0.143708241 TLS(ph)SSAQEDIIR ddPTM_A459_MK2206_30min_R1 3 TLSSSAQEDIIR 12 0 Q9H788;Q9H788-2 Q9H788 SH2D4A SH2 domain-containing protein 4A 1 T(0.002)LS(0.785)S(0.107)S(0.107)AQEDIIR;T(0.082)LS(0.433)S(0.433)S(0.052)AQEDIIR;TLS(0.771)S(0.225)S(0.004)AQEDIIR 170.26 0.00031382 240913000 7317.6 6397.1 6872.2 6023.9 6722.6 5920.4 6247.5 5884.5 5493.8 5464.3 TRUE FALSE 6695.199694 5980.647627 6405.734211 6487.861822 6454.824607 6255.607932 5830.740674 5833.052437 6064.90017 6141.258737 1.090199905 0.9738472 1.043065353 1.056438444 1.051058892 1.01861983 0.949437391 0.949813823 0.9875663 1 12.58431867 -7.097845333 4.366869154 0.967947239 1.039544208 0.541744242 0.030726423 0.177296022 5.768917838 0.011873947 0.009182136 7.98E-08 7.097845333 0.071596969 TLS(ph)TSDDVEDR ddPTM_A459_MK2206_30min_R2 1 TLSTSDDVEDR 11 0 Q96A65;Q96A65-2 Q96A65 EXOC4 Exocyst complex component 4 1 T(0.334)LS(0.638)T(0.028)SDDVEDR 182.41 3.66E-05 9686200 40739 35442 30259 35342 23310 23248 27615 16510 18434 26416 TRUE FALSE 43858.00916 33682.00182 31267.81996 32454.44555 22394.73228 24132.71893 23989.11733 18667.91369 20037.356 25554.04808 1.716284207 1.318069126 1.223595567 1.270031482 0.876367306 0.944379491 0.938759967 0.730526671 0.784116706 1 14.64126423 -4.384931122 0.454636085 0.817504331 2.603374153 0.856117806 0.108232158 2.470761842 0.302737097 0.074820378 2.558195988 4.12E-05 4.384931122 1.785869822 TLS(ph)TSDDVEDRENEK ddPTM_A459_MK2206_30min_R1 1 TLSTSDDVEDRENEK 15 1 Q96A65;Q96A65-2 Q96A65 EXOC4 Exocyst complex component 4 1 T(0.435)LS(0.56)T(0.002)S(0.002)DDVEDRENEK 78.228 0.018357 22931000 4571.7 3494 3235.8 2665.8 4360 4008.2 3854.7 2981.3 1647.3 2168 TRUE FALSE 4182.852908 3266.539965 3016.162911 2871.120378 4186.331968 4235.14082 3597.559996 2955.234808 1818.54273 2436.588208 1.716684377 1.340620444 1.237863215 1.178336318 1.718112217 1.738143855 1.476474353 1.212857716 0.746347998 1 11.25064674 -8.010439579 3.305823564 0.880650656 1.476620199 0.607935411 0.196279953 0.184741345 4.078850464 0.155828098 0.057644502 9.76E-09 8.010439579 0.595969543 TLS(ph)TSDDVEDRENEK ddPTM_A459_MK2206_30min_R2 1 TLSTSDDVEDRENEK 15 1 Q96A65;Q96A65-2 Q96A65 EXOC4 Exocyst complex component 4 1 T(0.141)LS(0.792)T(0.032)S(0.035)DDVEDRENEK 72.583 0.025067 40276000 147410 185430 187560 189920 144110 98461 155200 90349 85990 110120 TRUE FALSE 158695.8229 176221.8158 193813.1568 174402.9285 138451.5173 102208.0023 134822.0536 102157.9245 93469.25477 106526.7934 1.489726836 1.654248759 1.819384125 1.6371743 1.29968727 0.959458171 1.26561637 0.958988075 0.877424841 1 16.70085681 -6.451123642 2.584626054 1.024638028 1.666736452 0.858435636 0.121733035 0.105987882 1.395476063 0.043899649 0.049133251 3.54E-07 6.451123642 0.642098424 TLSAS(ph)AAEVAPR ddPTM_A459_MK2206_30min_R2 2 TLSASAAEVAPR 12 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 T(0.001)LS(0.001)AS(0.998)AAEVAPR;T(0.002)LS(0.025)AS(0.974)AAEVAPR 126.1 0.0027832 10260300 22058.3 23114 27814 28692 31468 30299 35449 27936 23658 24224 TRUE FALSE 23747.10041 21966.19237 28741.30488 26347.77182 30232.40821 31452.04968 30794.50372 31587.33112 25715.73008 23433.57286 1.013379417 0.937381273 1.226501185 1.124359993 1.290132255 1.342179012 1.314119016 1.347951988 1.097388359 1 14.51628931 -5.268884466 22.02104789 1.237379973 0.975380316 0.424009319 0.111178833 84.42966968 249731.3788 0.028736947 0.062144175 5.38E-06 5.268884466 -0.261999657 TLSDES(ph)ICSNR ddPTM_A459_MK2206_30min_R1 1 TLSDESICSNR 11 0 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 T(0.003)LS(0.012)DES(0.985)ICSNR 196.27 2.79E-19 0 1880.8 1419.9 1385.8 1077.1 1533.9 1565.6 1618.5 1541.8 1432.1 1421.9 TRUE FALSE 1720.828084 1327.464252 1291.735757 1160.058429 1472.801515 1654.242919 1510.532818 1528.320205 1580.97192 1598.055707 1.076826093 0.830674579 0.808317102 0.725918642 0.921620885 1.035159733 0.945231641 0.956362284 0.989309642 1 10.64210198 -6.519330555 24.15865402 0.979809159 0.850733776 0.315082102 0.086142368 116.3223945 792018.7065 0.028774547 0.02939868 3.02E-07 6.519330555 -0.129075383 TLSDFNSLIS(ph)SPHLGR ddPTM_A459_MK2206_30min_R2 1 TLSDFNSLISSPHLGR 16 0 Q9NRJ4 Q9NRJ4 TULP4 Tubby-related protein 4 1 TLSDFNSLIS(0.669)S(0.331)PHLGR 161.55 3.04E-05 3651100 12853 16055 14916 20370 17674 20585 23648 12995 15965 15860 TRUE FALSE 13837.03556 15257.73205 15413.292 18705.70584 16980.02996 21368.3766 20542.98919 14693.49112 17353.60684 15342.4895 0.901876815 0.994475639 1.004614798 1.219209297 1.106732382 1.392758105 1.338960616 0.957699278 1.131081553 1 13.90524498 -5.651223978 4.314920685 1.176361074 0.958999996 0.329322542 0.128849332 0.255827519 8.350331571 0.037644957 0.067321875 2.23E-06 5.651223978 -0.217361079 TLSDFNSLISS(ph)PHLGR ddPTM_A459_MK2206_30min_R1 1 TLSDFNSLISSPHLGR 16 0 Q9NRJ4 Q9NRJ4 TULP4 Tubby-related protein 4 1 TLSDFNSLIS(0.401)S(0.599)PHLGR 128.74 0.00061413 4668800 2384.4 2095.1 2092.8 1900.5 2630.3 2155.5 2529.2 2297.8 1898.7 1843.7 TRUE FALSE 2181.594259 1958.708609 1950.746567 2046.876839 2525.529581 2277.542547 2360.481683 2277.710577 2096.07666 2072.111475 1.052836339 0.945271831 0.941429354 0.987821777 1.21881936 1.099140936 1.139167323 1.099222027 1.011565586 1 11.0168859 -6.039729342 23.44155891 1.102178123 0.974427949 0.419566326 0.064598146 215.8770165 127373.797 0.018781501 0.024252781 9.13E-07 6.039729342 -0.127750174 TLSDFNSLISS(ph)PHLGR ddPTM_A459_MK2206_30min_R2 1 TLSDFNSLISSPHLGR 16 0 Q9NRJ4 Q9NRJ4 TULP4 Tubby-related protein 4 1 TLSDFNSLIS(0.118)S(0.882)PHLGR 167.9 9.24E-06 3391300 14288 13846 16032 17197 15666 20466 18115 13692 16167 14993 TRUE FALSE 15381.90027 13158.42777 16566.49888 15791.95009 15050.87412 21244.84797 15736.47874 15481.59141 17573.17644 14503.77964 1.060544262 0.907241292 1.142219428 1.08881619 1.037720822 1.464780113 1.084991577 1.067417721 1.211627374 1 13.82414129 -5.281807032 22.88165252 1.144158826 0.983892811 0.18525905 0.127932899 377.0379058 423576.4439 0.033486702 0.069901775 5.23E-06 5.281807032 -0.160266015 TLSDPPS(ph)PLPHGPPNK ddPTM_A459_MK2206_30min_R2 1 TLSDPPSPLPHGPPNK 16 0 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2 H0YBF7 ASAP1 "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1" 1 T(0.017)LS(0.049)DPPS(0.934)PLPHGPPNK 79.92 0.015831 6709100 88582 100020 81992 90433 85585 81801 79174 71980 85116 74135 TRUE FALSE 95363.90603 95053.15224 84725.57236 83044.33462 82224.50287 84913.99438 68778.35869 81388.03314 92519.23583 71715.98102 1.329744147 1.32541103 1.181404356 1.157961356 1.146529709 1.184031692 0.959038107 1.134866065 1.290078369 1 16.13000702 -5.319288762 1.203399126 1.119490871 1.369230338 0.458662167 0.08697609 0.670392406 1.479912901 0.028687738 0.165553845 4.79E-06 5.319288762 0.249739466 TLSDVEDQKELAS(ph)PVSPELR ddPTM_A459_MK2206_30min_R1 1 TLSDVEDQKELASPVSPELR 20 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 TLSDVEDQKELAS(0.972)PVS(0.028)PELR 66.906 0.0083177 15001000 2535.5 2351.5 2331.1 2729.9 2026.6 2075.3 2355.5 2515.9 2092.2 1858.2 TRUE FALSE 2319.842411 2198.416923 2172.871427 2940.157371 1945.876231 2192.801693 2198.368893 2493.903752 2309.691677 2088.407845 1.110818663 1.052676051 1.040444007 1.407846355 0.931751064 1.04998729 1.052653053 1.194165095 1.10595815 1 11.02818777 TLSDVEDQKELASPVS(ph)PELR ddPTM_A459_MK2206_30min_R1 2 TLSDVEDQKELASPVSPELR 20 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 TLSDVEDQKELASPVS(1)PELR;TLSDVEDQKELAS(0.004)PVS(0.996)PELR 102.19 0.0003605 42572000 8605.7 7680.1 8114.9 8013.1 8702.5 6429.1 7198.7 7714.9 6851 5737.8 TRUE FALSE 7873.740025 7180.124094 7564.083197 8630.27035 8355.860997 6793.110086 6718.487858 7647.449443 7563.185967 6448.641982 1.220991962 1.113431962 1.172973041 1.338308186 1.29575514 1.053417154 1.04184538 1.185900762 1.172833906 1 12.65477966 -6.768409759 24.99993598 1.099358605 1.224949673 0.43355174 0.078227691 193.7489392 694894.4885 0.029968272 0.02699619 1.70E-07 6.768409759 0.125591068 TLSDVEDQKELASPVS(ph)PELR ddPTM_A459_MK2206_30min_R2 1 TLSDVEDQKELASPVSPELR 20 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 TLSDVEDQKELAS(0.049)PVS(0.951)PELR 55.177 0.024959 4532100 15452 19334 20310 19825 22100 18135 20788 13589 20016 19564 TRUE FALSE 16635.017 18373.90167 20987.12526 18205.23408 21232.24296 18825.14013 18058.51063 15365.12896 21756.9555 18925.62828 0.878967755 0.970847646 1.108926211 0.96193552 1.121877839 0.994690367 0.954182887 0.811868897 1.149602812 1 14.20805357 -10.13708822 15.08116067 1.00000105 0.993618505 0.000123707 0.101653226 0 0 0.096814262 0.023480908 7.29E-11 10.13708822 -0.006382545 TLSGGRPGAGPELELGTAGS(ph)PGGAPPEAAPGDCTR ddPTM_A459_MK2206_30min_R1 1 TLSGGRPGAGPELELGTAGSPGGAPPEAAPGDCTR 35 1 Q8WYP3;Q8WYP3-2 Q8WYP3 RIN2 Ras and Rab interactor 2 1 TLSGGRPGAGPELELGT(0.02)AGS(0.98)PGGAPPEAAPGDCTR 87.21 5.29E-09 5153200 353.05 414.51 312.3 301.39 509.43 278.27 340.08 341.87 428.6 424.13 TRUE FALSE 323.0212436 387.5253237 291.1019461 324.60311 489.1383244 294.0254069 317.3938837 338.8810666 473.1545038 476.6744264 0.677655913 0.812976955 0.610693442 0.68097446 1.026147612 0.616826477 0.665850455 0.710927727 0.992615667 1 8.896860417 -8.264152644 23.94590388 0.996307926 0.727320944 0.472614863 0.114514003 120.8451173 1066461.241 0.095752766 0.029137799 5.44E-09 8.264152644 -0.268986981 TLSGGRPGAGPELELGTAGS(ph)PGGAPPEAAPGDCTR ddPTM_A459_MK2206_30min_R2 1 TLSGGRPGAGPELELGTAGSPGGAPPEAAPGDCTR 35 1 Q8WYP3;Q8WYP3-2 Q8WYP3 RIN2 Ras and Rab interactor 2 1 TLSGGRPGAGPELELGT(0.211)AGS(0.789)PGGAPPEAAPGDCTR 77.719 2.50E-06 5891100 3449.4 5145.3 4245.8 4418.6 5315.6 6116.3 5903.5 4430.9 5559.6 5870.5 TRUE FALSE 3713.488716 4889.791884 4387.352853 4057.586246 5106.882835 6349.060082 5128.363359 5010.033844 6043.163959 5678.946066 0.653904558 0.86103862 0.772564628 0.714496352 0.899265951 1.117999715 0.903048435 0.882211908 1.064134769 1 12.47140749 -6.455106666 4.88138831 0.98344415 0.762211405 0.663275094 0.081197286 0.144396288 6.637621335 0.025904757 0.028972755 3.51E-07 6.455106666 -0.221232744 TLSNAEDYLDDEDS(ph)D ddPTM_A459_MK2206_30min_R1 1 TLSNAEDYLDDEDSD 15 0 Q92882 Q92882 OSTF1 Osteoclast-stimulating factor 1 1 TLSNAEDYLDDEDS(1)D 101.39 0.010659 0 614.19 571.54 515.84 458.72 610.55 729.85 632.21 703.38 518.57 507.88 TRUE FALSE 561.9499153 534.3326421 480.826218 494.0506939 586.2305006 771.1734763 590.0364244 697.2304228 572.4772072 570.8000087 0.984495282 0.936111832 0.842372478 0.865540796 1.027033097 1.351039707 1.033700798 1.221496868 1.00293833 1 9.156841547 -6.521719723 24.99954251 1.136710982 0.909788691 0.472500175 0.106347716 35.16670646 758552.6168 0.033491111 0.033919558 3.01E-07 6.521719723 -0.226922291 TLSPSSGYSSQSGT(ph)PTLPPK ddPTM_A459_MK2206_30min_R2 1 TLSPSSGYSSQSGTPTLPPK 20 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 TLSPSSGYSS(0.001)QS(0.011)GT(0.988)PTLPPK 148.97 5.54E-06 0 10551 11095 9882.7 12944 12210 14281 14199 11545 12859 15341 TRUE FALSE 11358.79267 10544.03843 10212.18429 11886.43379 11730.57405 14824.47346 12334.65424 13053.97114 13977.45258 14840.42443 0.765395406 0.710494399 0.688132899 0.80094972 0.790447343 0.998925168 0.831152391 0.879622494 0.941849921 1 13.85724473 -6.406770729 1.929107898 0.916006643 0.726866385 0.697451546 0.058277558 0.195777894 1.443178118 0.02056274 0.024213069 3.92E-07 6.406770729 -0.189140258 TLSPT(ph)PASATAPTSQGIPTSDEESTPKK ddPTM_A459_MK2206_30min_R2 1 TLSPTPASATAPTSQGIPTSDEESTPKK 28 1 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 T(0.245)LS(0.268)PT(0.476)PAS(0.011)ATAPTSQGIPTSDEESTPKK 117.01 5.20E-12 5297600 18029 25403 24471 27515 28500 27194 26054 23983 23933 24047 TRUE FALSE 19409.3141 24141.52396 25286.85093 25266.93648 27380.9468 28228.88673 22633.0785 27117.66045 26014.64908 23262.34836 0.834366067 1.037793931 1.087029157 1.086173076 1.177049985 1.21350116 0.972948997 1.165731852 1.118315687 1 14.50570913 -4.413735032 1.372729596 1.112764098 0.437949403 0.562337759 0.070937449 2.184890363 1.900839779 0.020072087 2.613101809 3.86E-05 4.413735032 -0.674814694 TLSS(ph)PSNRPSGETSVPPPPAAPPFLPVGR ddPTM_A459_MK2206_30min_R2 1 TLSSPSNRPSGETSVPPPPAAPPFLPVGR 29 1 H3BUF6 H3BUF6 ATXN2L 1 T(0.142)LS(0.142)S(0.541)PS(0.039)NRPS(0.045)GET(0.045)S(0.047)VPPPPAAPPFLPVGR 79.731 1.84E-05 4769900 5518.5 8788.6 5661.4 7571.5 8418.2 5353.7 8724.4 4487.2 3758.7 8480 TRUE FALSE 5941.000603 8352.170904 5850.14825 6952.88423 8087.65917 5557.438805 7578.8758 5073.692447 4085.624932 8203.298294 0.724220965 1.018147897 0.713145864 0.847571791 0.985903338 0.677463943 0.923881533 0.618494204 0.498046613 1 13.00198837 -7.767662488 24.99886322 0.668702781 0.84281688 0.118910472 0.16044696 241.2920338 969273.6943 0.079614349 0.039748782 1.71E-08 7.767662488 0.174114099 TLSS(ph)PSNRPSGETSVPPPPAVGR ddPTM_A459_MK2206_30min_R2 2 TLSSPSNRPSGETSVPPPPAVGR 23 1 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 T(0.364)LS(0.116)S(0.411)PS(0.071)NRPS(0.021)GET(0.012)S(0.005)VPPPPAVGR;T(0.015)LS(0.154)S(0.5)PS(0.223)NRPS(0.06)GET(0.024)S(0.024)VPPPPAVGR 51.264 0.02144 37935800 22227.2 25000.1 21176.3 24900.8 27075.3 24400.7 24987.2 19463.2 19372 25276.6 TRUE FALSE 23928.93152 23758.63139 21882.30727 22866.32499 26012.18768 25329.28574 21706.35062 22007.10707 21056.94154 24451.82661 0.978615295 0.971650575 0.894915035 0.935158152 1.063813681 1.035885218 0.887718982 0.90001894 0.861160267 1 14.57765462 -7.284467098 24.58257045 0.903892784 0.97752961 0.257761344 0.055539027 927.7496078 990387.2292 0.024791546 0.016729071 5.19E-08 7.284467098 0.073636826 TLSS(ph)SAQEDIIR ddPTM_A459_MK2206_30min_R1 1 TLSSSAQEDIIR 12 0 Q9H788;Q9H788-2 Q9H788 SH2D4A SH2 domain-containing protein 4A 1 T(0.073)LS(0.041)S(0.443)S(0.443)AQEDIIR 201.3 8.14E-05 17510000 3202.5 2800.6 2476 2063 2863.2 2494.6 2603.5 2856.3 2054.3 1827.4 TRUE FALSE 2930.110558 2618.280431 2307.936019 2221.892617 2749.152681 2635.842096 2429.825265 2831.32767 2267.851836 2053.792108 1.426683132 1.274851734 1.123743737 1.081848844 1.338573982 1.283402583 1.183092123 1.37858533 1.10422658 1 11.00407444 -8.50051364 6.811916089 1.000069303 1.251647185 0.413921441 0.102844292 0.155725774 31.19308837 0.102448712 0.026513777 3.16E-09 8.50051364 0.251577882 TLSS(ph)SSMDLSR ddPTM_A459_MK2206_30min_R1 2 TLSSSSMDLSR 11 0 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 TLSS(0.7)S(0.289)S(0.011)MDLSR;TLSS(0.974)S(0.025)S(0.001)MDLSR 268.14 1.15E-30 173872000 8858.7 8460.1 8222.6 7628.9 9067.5 8466.6 9224.2 8490.5 7898.3 6617.9 TRUE FALSE 8105.221046 7909.345952 7664.472821 8216.4792 8706.322274 8945.971575 8608.870449 8416.268454 8719.356549 7437.775415 1.089737266 1.063402094 1.030479195 1.104695792 1.170554607 1.202775168 1.157452325 1.131557218 1.172307049 1 12.86065547 -6.00882569 4.908972933 1.149221719 1.061640053 0.289840926 0.053200005 0.19582306 13.39815238 0.014841095 0.020899401 9.80E-07 6.00882569 -0.087581665 TLSS(ph)SSMDLSR ddPTM_A459_MK2206_30min_R2 4 TLSSSSMDLSR 11 0 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 TLS(0.001)S(0.959)S(0.024)S(0.016)MDLSR;TLS(0.002)S(0.716)S(0.189)S(0.094)MDLSR;TLSS(0.711)S(0.278)S(0.011)MDLSR;TLSS(0.592)S(0.247)S(0.161)MDLSR 276.17 6.79E-32 126919600 280729 320570 293184 324196 372076 353617 367321 256686 292496 313198 TRUE FALSE 302221.8281 304650.96 302958.6082 297708.1497 357466.4267 367074.1427 319091.3115 290235.7415 317936.7734 302978.3749 0.997502968 1.005520477 0.999934759 0.982605276 1.179841389 1.211552286 1.053181804 0.957942103 1.049371175 1 18.2088553 -6.150692168 18.36153365 1.079190459 0.997283407 0.227323287 0.071051177 5.965577395 975.2527041 0.023619394 0.030492796 7.07E-07 6.150692168 -0.081907052 TLSSFFT(ph)PR ddPTM_A459_MK2206_30min_R1 2 TLSSFFTPR 9 0 P18858-3;P18858;M0R0Q7;P18858-2;B4E135;F5GZ28 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 TLSSFFT(1)PR;TLSSFFT(1)PR 139.15 0.0056234 80131000 8729.9 8738.4 8369.8 6359.1 7753.9 7476.5 8169.9 8021.9 6093.1 6118.7 TRUE FALSE 7987.376162 8169.528572 7801.681296 6848.878984 7445.045744 7899.812969 7624.900878 7951.765374 6726.499549 6876.73075 1.161507765 1.187995992 1.1345044 0.995949854 1.082643194 1.148774506 1.108797357 1.156329317 0.978153689 1 12.74750714 -1.522878753 0.023539771 0.416466611 2.013949223 0.347645424 0.059415627 2941.827064 5.348433458 127.6758372 255.6750198 0.029999999 1.522878753 1.597482613 TLSSFFT(ph)PR ddPTM_A459_MK2206_30min_R2 4 TLSSFFTPR 9 0 P18858-3;P18858;M0R0Q7;P18858-2;B4E135;F5GZ28 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 TLSSFFT(1)PR;TLSS(0.001)FFT(0.999)PR;TLSSFFT(1)PR;TLSSFFT(1)PR 127.83 0.010453 51732500 152148 150199 150968 180814 168170 174305 162881 130291 155785 157688 TRUE FALSE 163796.5679 142740.3361 156001.1978 166040.9178 161566.8008 180938.2989 141494.529 147320.4811 169334.8977 152542.6535 1.073775525 0.935740482 1.022672638 1.088488459 1.05915819 1.186148889 0.92757354 0.965765822 1.110082287 1 17.21885318 -5.523956707 24.77902588 1.04851766 0.998370142 0.050459822 0.076079695 90.38313193 2077646.43 0.021088014 0.036940572 2.99E-06 5.523956707 -0.050147518 TLSSPS(ph)NRPSGETSVPPPPAVGR ddPTM_A459_MK2206_30min_R1 2 TLSSPSNRPSGETSVPPPPAVGR 23 1 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 T(0.001)LS(0.013)S(0.179)PS(0.798)NRPS(0.007)GET(0.001)S(0.001)VPPPPAVGR;T(0.003)LS(0.009)S(0.087)PS(0.414)NRPS(0.414)GET(0.053)S(0.02)VPPPPAVGR 79.462 0.00034811 154021000 3936 3999.6 4126.9 3270.1 4110.8 4088.1 4961.2 3738.3 3821.2 3601.5 TRUE FALSE 3601.222531 3739.225313 3846.777526 3521.963669 3947.058131 4319.564689 4630.2474 3705.616437 4218.427414 4047.68101 0.889700182 0.923794465 0.950365781 0.87011888 0.975140611 1.067170234 1.143925964 0.915491223 1.04218376 1 11.98287988 -6.520925775 5.008574239 1.034696552 0.913066427 0.517265736 0.056929818 0.15768059 11.58452523 0.01913207 0.020225139 3.01E-07 6.520925775 -0.121630124 TLSSPSNRPS(ph)GETSVPPPPAVGR ddPTM_A459_MK2206_30min_R1 1 TLSSPSNRPSGETSVPPPPAVGR 23 1 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 T(0.001)LS(0.025)S(0.145)PS(0.145)NRPS(0.463)GET(0.184)S(0.036)VPPPPAVGR 100.39 2.62E-05 13550000 774.2 696.32 674.13 615.76 802.74 617.79 645.59 710.75 699.96 574.09 TRUE FALSE 708.3502245 650.9894414 628.3719338 663.1859419 770.765166 652.7687359 602.523869 704.5359877 772.7233468 645.2126034 1.09785553 1.008953387 0.973899038 1.027856459 1.194590995 1.011711074 0.933837724 1.091943933 1.197625934 1 9.33363081 -6.031910485 24.98311405 1.070412228 1.021069319 0.064384995 0.082092365 1976.74579 1547616.092 0.025463866 0.03290669 9.29E-07 6.031910485 -0.049342909 TLSSPSNRPS(ph)GETSVPPPPAVGR ddPTM_A459_MK2206_30min_R2 1 TLSSPSNRPSGETSVPPPPAVGR 23 1 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 T(0.007)LS(0.031)S(0.104)PS(0.126)NRPS(0.357)GET(0.187)S(0.187)VPPPPAVGR 67.312 0.0019985 25336000 21504 24636 27220 31642 24584 22563 27634 22852 24127 24627 TRUE FALSE 23150.36277 23412.61206 28127.50121 29056.74738 23618.70864 23421.65078 24005.62261 25838.83486 26225.52285 23823.42301 0.971747963 0.982756007 1.180665818 1.219671387 0.991407013 0.983135411 1.007647919 1.084597913 1.100829333 1 14.5400931 TLSSS(ph)SMDLSR ddPTM_A459_MK2206_30min_R1 1 TLSSSSMDLSR 11 0 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 TLS(0.013)S(0.223)S(0.735)S(0.029)MDLSR 251.75 1.43E-15 83246000 4363.7 4068.1 4083 3946 4803.2 3947.3 4854.6 3953.7 3994.7 2865.7 TRUE FALSE 3992.5444 3803.265951 3805.857336 4249.921604 4611.878373 4170.792715 4530.758492 3919.133218 4409.96336 3220.724551 1.239641682 1.180872779 1.181677376 1.319554509 1.431938156 1.294985848 1.406751313 1.216848307 1.369245737 1 11.65316957 -5.764140975 24.92336774 1.311187312 1.198744817 0.096505914 0.116377481 116.4006467 1073863.058 0.030241726 0.047236563 1.72E-06 5.764140975 -0.112442495 TLSSS(ph)SMDLSR ddPTM_A459_MK2206_30min_R2 1 TLSSSSMDLSR 11 0 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 TLS(0.003)S(0.392)S(0.582)S(0.024)MDLSR 239.48 1.88E-10 35790000 103020 109640 99982 106920 125800 120610 122710 99128 83074 114000 TRUE FALSE 110907.2904 104195.437 103315.35 98184.29398 120860.4599 125199.8981 106598.0296 112084.37 90299.62636 110280.1893 1.005686434 0.944824611 0.936844148 0.890316698 1.095939902 1.135289111 0.966610869 1.01635997 0.818820016 1 16.75081412 -4.380213007 18.79524366 0.982555492 12.11744548 0.006641987 0.087587279 1668.769715 219803.3671 0.022166313 170.9207954 4.17E-05 4.380213007 11.13488999 TLSVAAAFNEDEDS(ph)EPEEMPPEAK ddPTM_A459_MK2206_30min_R1 16 TLSVAAAFNEDEDSEPEEMPPEAK 24 0 Q8WW12 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 1 TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(0.999)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK 165.17 1.29E-14 52995200 46139.83 47842.66 49113.64 42321.85 45774.27 40885.9 44285.6 45545.92 41575.95 39543.53 TRUE FALSE 42215.39517 44728.09414 45779.94296 45581.48622 43950.9839 43200.82433 41331.38843 45147.71682 45897.91878 44442.48103 0.949888354 1.006426579 1.030094223 1.025628749 0.988940826 0.97206149 0.929997324 1.015868506 1.032748796 1 15.43965174 -7.962460838 24.99988942 1.019019575 0.988504656 0.167553973 0.030272456 309.4368413 206074.7305 0.018124771 0.008706838 1.09E-08 7.962460838 -0.030514919 TLSVAAAFNEDEDS(ph)EPEEMPPEAK ddPTM_A459_MK2206_30min_R2 4 TLSVAAAFNEDEDSEPEEMPPEAK 24 0 Q8WW12 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 1 TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK 107.21 8.30E-05 0 26783.6 32038.6 25796.8 27211.2 32893.7 25283.6 31400.9 29735.5 23112.9 29526.4 TRUE FALSE 28834.17301 30447.60971 26656.85244 24987.95792 31602.12806 26245.78512 27277.92411 33622.03195 25123.21826 28562.95599 1.009495412 1.065982447 0.933266587 0.874837952 1.106402575 0.918874963 0.955010543 1.177120182 0.879573468 1 14.80185767 TLTAEEAEEEWERR ddPTM_A459_MK2206_30min_R2 2 TLTAEEAEEEWERR 14 1 P35269;M0R0R9 P35269 GTF2F1 General transcription factor IIF subunit 1 0 ; 194.06 0.0001603 3375900 11251.8 14196.4 15069.2 15163.3 14489.5 12896.3 13653.5 12875.3 11306.6 15695.6 FALSE TRUE 12113.24646 13491.42742 15571.59961 13924.40989 13920.56943 13387.07773 11860.77905 14558.14592 12290.02763 15183.45386 0.797792556 0.888561163 1.025563732 0.917077894 0.916824957 0.881688571 0.781164757 0.958816489 0.80943557 1 13.89021238 -6.788925688 6.557862779 0.87685465 0.914970416 0.011399705 0.078908414 0.633494404 89.08911561 0.02749082 0.024817796 1.63E-07 6.788925688 0.038115766 TLTDEVNS(ph)PDSDR ddPTM_A459_MK2206_30min_R2 1 TLTDEVNSPDSDR 13 0 Q8TAQ2;F8VXC8;Q8TAQ2-2;Q8TAQ2-3 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 1 TLTDEVNS(0.599)PDS(0.401)DR 121.95 0.0027408 8427200 53042 41258 49367 45921 48188 50099 56868 51024 45436 45730 TRUE FALSE 57102.9363 39209.18771 51012.87114 42169.10741 46295.89699 52005.55255 49401.16329 57693.01199 49387.94115 44237.83385 1.290816736 0.886327026 1.153150295 0.953236263 1.046522693 1.175589943 1.116717502 1.304155447 1.116418614 1 15.43299312 -6.758944119 24.94267582 1.159969849 1.054604022 0.074783402 0.124320955 123.5024509 1234533.279 0.039370812 0.037636494 1.74E-07 6.758944119 -0.105365827 TLTDEVNS(ph)PDSDRR ddPTM_A459_MK2206_30min_R1 2 TLTDEVNSPDSDRR 14 1 Q8TAQ2;F8VXC8;Q8TAQ2-2;Q8TAQ2-3 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 1 TLTDEVNS(0.632)PDS(0.368)DRR;TLTDEVNS(0.855)PDS(0.145)DRR 199.15 0.00015308 113618000 7020.6 6934.9 6450.6 5885.1 7474.2 6008.1 7100.9 6255.4 6112.8 5431.4 TRUE FALSE 6423.461103 6483.43675 6012.751244 6338.371422 7176.486787 6348.27343 6627.211917 6200.709697 6748.247435 6104.282837 1.052287595 1.062112769 0.985005349 1.038348253 1.175647816 1.039970394 1.085665932 1.015796591 1.105493899 1 12.57560609 -6.029831775 24.96966299 1.073779672 1.031973577 0.108981546 0.049999784 1363.208827 1141026.175 0.014435201 0.018668236 9.34E-07 6.029831775 -0.041806095 TLTDEVNS(ph)PDSDRR ddPTM_A459_MK2206_30min_R2 4 TLTDEVNSPDSDRR 14 1 Q8TAQ2;F8VXC8;Q8TAQ2-2;Q8TAQ2-3 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 1 TLTDEVNS(0.994)PDS(0.006)DRR;TLTDEVNS(0.911)PDS(0.089)DRR;TLTDEVNS(0.821)PDS(0.179)DRR;TLTDEVNS(0.664)PDS(0.336)DRR 167.61 0.00013323 476493000 407483 505773 475164 542871 548207 571491 537134 431981 459944 510566 TRUE FALSE 438680.2118 480657.0483 491005.7306 498516.7027 526681.6387 593239.4905 466607.6606 488442.3999 499949.0977 493906.2732 0.888185139 0.973174617 0.994127342 1.009334624 1.066359484 1.201117545 0.944729164 0.988937429 1.01223476 1 18.91387777 -4.753530963 1.135755812 1.035368089 0.815339349 0.316038252 0.064545197 2.267341195 2.332874425 0.021645737 0.608667096 1.76E-05 4.753530963 -0.22002874 TLTDEVNSPDS(ph)DR ddPTM_A459_MK2206_30min_R2 1 TLTDEVNSPDSDR 13 0 Q8TAQ2;F8VXC8;Q8TAQ2-2;Q8TAQ2-3 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 1 TLTDEVNS(0.045)PDS(0.954)DR 116.87 0.0037257 7904400 33468 39155 27592 38398 32297 33638 35082 25530 25953 39220 TRUE FALSE 36030.33581 37210.61964 28511.90351 35260.76057 31028.8575 34918.11766 30475.69126 28866.85866 28210.34503 37940.25461 0.949659832 0.980768843 0.751494786 0.92937596 0.81783472 0.920344843 0.80325479 0.76085042 0.74354654 1 15.21144174 -5.240579528 24.87574958 0.836134531 0.96521437 0.271492593 0.08120419 954.2479519 1137953.599 0.020095619 0.053037444 5.75E-06 5.240579528 0.129079839 TLTDEVNSPDS(ph)DRR ddPTM_A459_MK2206_30min_R1 2 TLTDEVNSPDSDRR 14 1 Q8TAQ2;F8VXC8;Q8TAQ2-2;Q8TAQ2-3 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 1 TLTDEVNS(0.093)PDS(0.907)DRR;TLTDEVNS(0.033)PDS(0.967)DRR 166.79 0.00026039 95312000 15001.8 15208.4 15088.3 13251.7 16042.4 14546 16913.7 14261 11513.1 13295 TRUE FALSE 13725.81813 14218.3304 14064.14823 14272.34823 15403.39724 15369.58195 15785.41793 14136.31758 12709.92795 14942.08497 0.918601263 0.951562678 0.941244027 0.955177825 1.030873353 1.028610263 1.056440113 0.946073965 0.850612747 1 13.86709385 -6.018664192 18.82872672 0.988864031 0.94018378 0.138318785 0.054383728 66.07553551 66661.17471 0.017305536 0.022924936 9.58E-07 6.018664192 -0.048680251 TLTDEVNSPDS(ph)DRR ddPTM_A459_MK2206_30min_R2 1 TLTDEVNSPDSDRR 14 1 Q8TAQ2;F8VXC8;Q8TAQ2-2;Q8TAQ2-3 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 1 T(0.007)LT(0.001)DEVNS(0.406)PDS(0.585)DRR 65.022 0.037596 161810000 48376 73093 70154 78565 67157 70663 78731 66983 73190 81645 TRUE FALSE 52079.70375 69463.30791 72492.89935 72145.98818 64520.07874 73352.12998 68393.52513 75737.90809 79555.9339 78980.93034 0.659395927 0.879494678 0.917853196 0.913460855 0.816907049 0.928732159 0.865949854 0.958939174 1.007280284 1 16.26921674 -4.744171717 3.086204414 0.91784016 0.605279823 0.680929548 0.054301171 0.260721675 3.386087347 0.014111752 0.210900346 1.80E-05 4.744171717 -0.312560336 TLTEPS(ph)VDFNHSDDFTPISTVQK ddPTM_A459_MK2206_30min_R1 2 TLTEPSVDFNHSDDFTPISTVQK 23 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 T(0.048)LT(0.311)EPS(0.64)VDFNHSDDFTPISTVQK;T(0.297)LT(0.297)EPS(0.406)VDFNHS(0.001)DDFTPISTVQK 108.3 1.20E-05 79009000 3359.3 4380.1 3797.5 3312.7 3745.4 5964.9 7280.1 8397.9 7745.9 7643.4 TRUE FALSE 3073.573895 4094.954694 3539.73628 3567.844728 3596.212787 6302.627483 6794.457812 8324.478046 8551.114024 8590.322097 0.357794953 0.476693964 0.41206095 0.415333056 0.418635384 0.733689309 0.790943312 0.969053075 0.995435785 1 13.06849651 -7.129561748 1.225896327 0.995940624 0.405801115 0.961975492 0.049739458 0.08000164 0.240005173 0.029827425 0.019176132 7.42E-08 7.129561748 -0.590139509 down TLTEPS(ph)VDFNHSDDFTPISTVQK ddPTM_A459_MK2206_30min_R2 2 TLTEPSVDFNHSDDFTPISTVQK 23 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 T(0.079)LT(0.33)EPS(0.585)VDFNHS(0.005)DDFTPISTVQK;T(0.111)LT(0.111)EPS(0.778)VDFNHSDDFTPISTVQK 96.633 4.67E-05 31119000 38787 50858 47860 49619 64123 67838 98058 69785 86141 103232 TRUE FALSE 41756.56254 48332.46567 49455.62851 45564.96898 61605.20883 70419.62263 85182.86681 78906.13911 93633.38847 99863.54829 0.418136179 0.483985063 0.495232038 0.456272281 0.61689385 0.705158427 0.852992591 0.79013955 0.937613274 1 16.60767055 -7.024226375 0.622977141 0.976539214 0.4218127 0.958004311 0.041314063 0.150604249 0.123019914 0.036075618 0.03118886 9.46E-08 7.024226375 -0.554726514 down TLTLVDTGIGMTK ddPTM_A459_MK2206_30min_R1 1 TLTLVDTGIGMTK 13 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 149.49 0.0071745 10215000 2649 2948.7 2907.1 2411.1 2680.8 2588.3 2489.3 2552 2359.3 2251 FALSE TRUE 2423.68864 2756.739094 2709.774152 2596.80334 2574.018059 2734.847309 2323.243339 2529.688133 2604.557678 2529.870874 0.958028595 1.08967581 1.071111644 1.02645687 1.017450371 1.081022489 0.918324869 0.999927767 1.029521982 1 11.30484804 -7.240354109 24.99833828 0.986937618 1.042542362 0.262084216 0.044056697 1087.314415 1289103.35 0.016645644 0.012881865 5.75E-08 7.240354109 0.055604744 TLTLVDTGIGMTK ddPTM_A459_MK2206_30min_R2 1 TLTLVDTGIGMTK 13 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 151.98 0.0062475 2003800 15058 19614 16501 13995 15869 17325 15973 13067 13509 13336 FALSE TRUE 16210.85206 18639.99728 17051.1351 12851.56373 15245.90332 17984.31502 13875.72591 14774.90177 14683.9884 12900.84741 1.256572653 1.444866115 1.321706595 0.996179811 1.181775339 1.394041371 1.075567013 1.145265989 1.138218904 1 13.65517821 -1.522878746 0.101422303 0.900663936 2.211566543 0.357271541 0.118799822 148.2087136 1.067157255 1.541908688 27.04592135 0.03 1.522878746 1.310902607 TLVITSTPAS(ph)PNR ddPTM_A459_MK2206_30min_R2 4 TLVITSTPASPNR 13 0 E9PK89;Q8TBN0 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 1 TLVITSTPAS(1)PNR;T(0.005)LVIT(0.001)S(0.002)T(0.001)PAS(0.991)PNR;TLVITSTPAS(0.999)PNR;T(0.006)LVIT(0.04)S(0.04)T(0.032)PAS(0.883)PNR 132.24 0.0014429 38976500 220273 225630 190795 233147 193537 194802 208644 167212 179190 225469 TRUE FALSE 237137.2702 214425.5423 197156.0101 214098.1443 185937.7649 202215.3266 181248.7922 189067.1825 194775.6223 218111.965 1.087227242 0.983098485 0.903921113 0.98159743 0.852487689 0.927117073 0.830989681 0.866835446 0.893007508 1 17.73470939 -1.522879043 0.656160532 0.890183179 19.48359901 0.551110021 0.050534895 153.2896976 0.966666387 0.019971459 4145.835911 0.029999979 1.522879043 18.59341583 TLVLSSS(ph)PTSPTQEPLPGGK ddPTM_A459_MK2206_30min_R2 1 TLVLSSSPTSPTQEPLPGGK 20 0 H0YI02;J3KPG1;Q96QF0-8;Q96QF0-5;Q96QF0-7;Q96QF0-6;Q96QF0-3;Q96QF0-4;Q96QF0-2;Q96QF0 H0YI02 RAB3IP Rab-3A-interacting protein 1 TLVLS(0.006)S(0.031)S(0.912)PT(0.027)S(0.019)PT(0.006)QEPLPGGK 137.81 0.00012493 0 10120 14956 11880 14734 15927 12740 11949 11906 10339 11735 TRUE FALSE 10894.79498 14213.30679 12276.07327 13530.18507 15301.62595 13224.82963 10380.08195 13462.15508 11238.26753 11352.08791 0.959717284 1.252043404 1.081393429 1.191867538 1.347912919 1.164968923 0.914376459 1.185874809 0.989973617 1 13.47067005 -7.052149714 19.71140348 1.038276696 1.176849185 0.266530471 0.115037103 48.37075455 18281.99145 0.043189113 0.033455885 8.87E-08 7.052149714 0.138572489 TLVLSSSPT(ph)SPTQEPLPGGK ddPTM_A459_MK2206_30min_R2 1 TLVLSSSPTSPTQEPLPGGK 20 0 H0YI02;J3KPG1;Q96QF0-8;Q96QF0-5;Q96QF0-7;Q96QF0-6;Q96QF0-3;Q96QF0-4;Q96QF0-2;Q96QF0 H0YI02 RAB3IP Rab-3A-interacting protein 1 TLVLS(0.002)S(0.028)S(0.355)PT(0.613)S(0.002)PTQEPLPGGK 281.09 1.31E-71 4689400 60530 80535 73589 82565 69283 66525 73284 57956 61682 66614 TRUE FALSE 65164.22334 76535.74901 76042.42053 75819.17539 66562.6013 69056.65549 63661.72277 65531.04819 67046.98886 64440.39064 1.011232593 1.187698402 1.180042824 1.176578457 1.032932927 1.071636202 0.987916463 1.016925061 1.040449758 1 15.97567762 -6.274542193 21.86701031 1.026302895 1.145314137 0.538762261 0.051488184 110.5333863 184466.1454 0.01599673 0.018294057 5.31E-07 6.274542193 0.119011242 TLYSFFS(ph)PSPAR ddPTM_A459_MK2206_30min_R1 3 TLYSFFSPSPAR 12 0 P13051 P13051 UNG Uracil-DNA glycosylase 1 T(0.007)LYS(0.024)FFS(0.969)PSPAR;TLYSFFS(0.913)PS(0.087)PAR;TLYSFFS(1)PSPAR 215.51 4.97E-07 71635000 4367.5 4505.2 4744.5 3783.5 5422 4801.93 5334.8 4957.84 4116.18 4475.21 TRUE FALSE 3996.02119 4211.910661 4422.456559 4074.905826 5206.030259 5073.811127 4978.925226 4914.494128 4544.071641 5029.632801 0.794495612 0.837419117 0.879280205 0.810179587 1.035071637 1.008783609 0.989918235 0.977107937 0.903459919 1 12.29623736 -6.2556636 24.99293071 0.98594169 0.834344486 0.802650279 0.037723713 218.1176843 943837.0812 0.011731022 0.014736668 5.55E-07 6.2556636 -0.151597205 TLYSFFS(ph)PSPAR ddPTM_A459_MK2206_30min_R2 3 TLYSFFSPSPAR 12 0 P13051 P13051 UNG Uracil-DNA glycosylase 1 TLYSFFS(0.996)PS(0.004)PAR;T(0.033)LYS(0.003)FFS(0.963)PSPAR;TLYS(0.001)FFS(0.618)PS(0.381)PAR 181.76 0.00010413 37095300 48836 55690 54527 53010 55873 52733 56837 40717 46079 57019 TRUE FALSE 52574.92171 52924.51558 56344.90297 48678.91343 53679.14528 54739.79127 49374.23363 46038.8517 50086.86813 55158.4747 0.953161268 0.959499259 1.021509447 0.882528273 0.973180378 0.992409445 0.895134137 0.834665062 0.908053901 1 15.75129494 -7.27814415 23.97958126 0.895685348 0.96289007 0.196661597 0.05073065 630.8494993 905575.1706 0.020594459 0.013934733 5.27E-08 7.27814415 0.067204722 TLYSFFSPS(ph)PAR ddPTM_A459_MK2206_30min_R2 1 TLYSFFSPSPAR 12 0 P13051 P13051 UNG Uracil-DNA glycosylase 1 TLYSFFS(0.42)PS(0.579)PAR 129.17 0.0023473 9214000 16404 14224 12535 15481 13933 15408 18592 13975 14008 16524 TRUE FALSE 17659.90285 13517.65684 12952.91064 14216.15278 13385.92041 15994.36224 16150.84807 15801.58048 15226.39052 15984.82323 1.104791876 0.845655698 0.810325548 0.889353143 0.837414353 1.000596754 1.010386404 0.988536454 0.95255295 1 13.96441517 -6.776882058 24.90383618 0.990946312 0.889330902 0.263746125 0.077007152 305.4730019 492621.8513 0.027313555 0.024174929 1.67E-07 6.776882058 -0.10161541 TMCPLLSMKPGEYSYFS(ph)PR ddPTM_A459_MK2206_30min_R1 1 TMCPLLSMKPGEYSYFSPR 19 1 C9J470;E9PHA2;Q15003;Q15003-2 C9J470 NCAPH Condensin complex subunit 2 1 TMCPLLSMKPGEYSYFS(1)PR 132.67 0.00013328 18939000 2242.7 2305.5 2272.9 1979.5 2411.6 2302.5 2314.1 2118 2316.5 1755 TRUE FALSE 2051.946588 2155.411531 2118.621881 2131.961433 2315.540865 2432.86556 2159.730611 2099.482549 2557.308465 1972.42265 1.0403179 1.092773667 1.074121655 1.080884684 1.173957755 1.233440288 1.0949634 1.064418191 1.296531687 1 10.94575301 -6.189091108 6.387064815 1.1490412 1.072922198 0.162194474 0.079558375 0.437031429 31.40920219 0.022914809 0.029657263 6.47E-07 6.189091108 -0.076119002 TMFAQVES(ph)DDEEAKNEPEWK ddPTM_A459_MK2206_30min_R1 5 TMFAQVESDDEEAKNEPEWK 20 1 Q9NW82 Q9NW82 WDR70 WD repeat-containing protein 70 1 T(0.01)MFAQVES(0.99)DDEEAKNEPEWK;T(0.007)MFAQVES(0.993)DDEEAKNEPEWK;T(0.008)MFAQVES(0.992)DDEEAKNEPEWK;T(0.004)MFAQVES(0.996)DDEEAKNEPEWK;T(0.012)MFAQVES(0.988)DDEEAKNEPEWK 76.049 0.0032097 94810700 11310.29 14443.2 13669 13435.7 7963.16 7775.8 8938.7 9879.58 11452.59 10434.4 TRUE FALSE 10348.29044 13502.94505 12741.18636 14470.51994 7645.970475 8216.059076 8342.415633 9793.203874 12643.12771 11727.09225 0.882425944 1.15143164 1.086474473 1.233939295 0.651992012 0.700604967 0.711379723 0.835092252 1.078112754 1 13.51755772 -6.259490901 24.99851457 0.808931104 1.092908582 0.415135227 0.149395512 166.9152745 2141481.471 0.046142746 0.056609058 5.50E-07 6.259490901 0.283977478 TMIIS(ph)PER ddPTM_A459_MK2206_30min_R1 2 TMIISPER 8 0 O75533;B4DGZ4;A0A494C1M2;O75533-2 O75533 SF3B1 Splicing factor 3B subunit 1 1 T(0.001)MIIS(0.999)PER;TMIIS(1)PER 112.3 0.011233 65899000 8912.3 10073.8 9228.4 6444.9 8551.6 8283.3 10857.4 7263.4 11051.3 13485.1 TRUE FALSE 8154.262085 9417.993789 8602.00192 6941.287315 8210.971664 8752.293288 10133.12266 7199.89686 12200.12218 15155.736 0.538031415 0.621414479 0.567574014 0.457997376 0.541773205 0.577490482 0.66859984 0.475060852 0.804983815 1 13.88757629 -8.489273381 3.665237683 0.998650253 0.560091699 0.854896882 0.059666479 0.069044249 2.171809748 0.058355149 0.01537522 3.24E-09 8.489273381 -0.438558554 TMIIS(ph)PER ddPTM_A459_MK2206_30min_R2 2 TMIISPER 8 0 O75533;B4DGZ4;A0A494C1M2;O75533-2 O75533 SF3B1 Splicing factor 3B subunit 1 1 T(0.003)MIIS(0.997)PER;T(0.003)MIIS(0.997)PER 94.409 0.022719 60916000 87895 72985 92491 96331 68066 77203 90538 64763 62183 89813 TRUE FALSE 94624.30878 69360.67103 95574.60378 88460.44915 65393.38684 80141.01426 78650.25184 73227.74646 67591.56494 86882.40917 1.089107792 0.798328128 1.100045506 1.01816294 0.752665441 0.922407827 0.905249435 0.84283743 0.777966053 1 16.40677649 -6.233142532 24.69153484 0.863693645 0.9939505 0.29528238 0.101503967 826.3969454 721105.1837 0.029028196 0.037467417 5.85E-07 6.233142532 0.130256854 TMIIS(ph)PERLDPFADGGK ddPTM_A459_MK2206_30min_R2 2 TMIISPERLDPFADGGK 17 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 T(0.013)MIIS(0.987)PERLDPFADGGK;T(0.258)MIIS(0.742)PERLDPFADGGK 99.392 0.022816 10835200 43734 54669 52349 56482 53442 47718 68822 48263 44651 51582 TRUE FALSE 47082.30867 51954.21696 54094.28953 51867.23992 51343.59856 49533.94193 59785.58873 54571.13981 48534.66327 49898.88356 0.94355435 1.041189967 1.084078153 1.039446902 1.028952852 0.992686377 1.198134797 1.093634485 0.972660304 1 15.60671992 TMPNSS(ph)TPTSQINTIDSR ddPTM_A459_MK2206_30min_R2 1 TMPNSSTPTSQINTIDSR 18 0 Q92547 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 1 TMPNS(0.213)S(0.691)T(0.048)PT(0.023)S(0.023)QINT(0.001)IDSR 140.68 0.00014024 0 7359.1 7527 7337.5 9586.8 6759 6805.7 8702.3 6167.4 5990.7 6953.8 TRUE FALSE 7922.518354 7153.220125 7582.128588 8803.527773 6493.607699 7064.695682 7559.677557 6973.500356 6511.760257 6726.898075 1.177737237 1.063375726 1.12713594 1.308705391 0.965319769 1.050215954 1.123798439 1.036659137 0.968018273 1 12.71572568 -6.28884231 24.99973502 1.032135415 1.158669668 0.492451906 0.071628996 745.2835896 679921.4561 0.023074072 0.026170422 5.14E-07 6.28884231 0.126534253 TMQFEPSTMVY(ph)DACR ddPTM_A459_MK2206_30min_R1 1 TMQFEPSTMVYDACR 15 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 TMQFEPSTMVY(1)DACR 143.76 0.0052586 3770300 2401.8 2709.6 3103.1 2610.5 2262.4 1801.7 2173.8 2519.2 1884.3 2334.7 TRUE FALSE 2197.514298 2533.204548 2892.470218 2811.561162 2172.283817 1903.710697 2028.789768 2497.1749 2080.179728 2623.940262 0.837486405 0.965420053 1.102338441 1.071503495 0.827870912 0.725516021 0.773184435 0.95168893 0.792769469 1 11.35751916 -6.276770379 23.86817027 0.833173913 0.999857402 0.339148211 0.100951552 484.6318767 754500.1612 0.032429684 0.036926492 5.29E-07 6.276770379 0.166683489 TMS(ph)QGEITK ddPTM_A459_MK2206_30min_R1 2 TMSQGEITK 9 0 H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BV44 H3BRD5 MYO9A Unconventional myosin-IXa 1 T(0.289)MS(0.711)QGEITK;T(0.098)MS(0.902)QGEITK 109.16 0.011593 16187800 4204.5 4322.8 4188.8 3846.3 3917.9 4084.6 3908.4 3664.9 3860.2 3623.2 TRUE FALSE 3846.885196 4041.384934 3904.475927 4142.542692 3761.841747 4315.866522 3647.677767 3632.858166 4261.481604 4072.06937 0.94470031 0.992464658 0.958843176 1.017306513 0.923815732 1.059870579 0.895779869 0.89214054 1.046514982 1 11.99154642 TMS(ph)SDDEDCSAK ddPTM_A459_MK2206_30min_R1 1 TMSSDDEDCSAK 12 0 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 T(0.013)MS(0.661)S(0.326)DDEDCSAK 221.09 2.80E-08 9158800 3193 2421.6 2659.4 2530 2860 2688.7 2924 2650.2 1699.6 2248 TRUE FALSE 2921.418583 2263.9534 2478.887338 2724.861038 2746.080144 2840.93187 2728.945295 2627.029581 1876.279502 2526.499212 1.156310902 0.896083161 0.981155001 1.078512523 1.086911142 1.124453892 1.08012909 1.039790382 0.742640051 1 11.30292401 -8.14027441 8.212394178 0.872289048 1.053395199 0.400827416 0.090128416 0.276002966 17.05925802 0.060756142 0.022820078 7.24E-09 8.14027441 0.181106152 TMSS(ph)DDEDCSAK ddPTM_A459_MK2206_30min_R2 3 TMSSDDEDCSAK 12 0 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 TMS(0.049)S(0.948)DDEDCS(0.003)AK;TMS(0.024)S(0.976)DDEDCSAK;T(0.001)MS(0.105)S(0.894)DDEDCSAK 289.86 6.15E-56 43696300 141736 136742 138535 140186 141800 118832 165159 127790 115879 154836 TRUE FALSE 152587.4171 129951.5911 143153.6878 128732.3554 136232.2195 123354.235 143473.4249 144492.5918 125957.946 149783.714 1.018718344 0.867594932 0.955736 0.859454956 0.909526249 0.823549048 0.957870659 0.964674916 0.840932185 1 17.19252124 TNATSPGVNS(ph)STSPQSTDK ddPTM_A459_MK2206_30min_R1 1 TNATSPGVNSSTSPQSTDK 19 0 B7ZM87;O75044 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 T(0.002)NAT(0.008)S(0.041)PGVNS(0.211)S(0.211)T(0.211)S(0.211)PQS(0.086)T(0.019)DK 102.5 0.0010843 7787400 790 790.2 857.15 694.12 715.51 580.36 833.18 660.53 622.91 573.11 TRUE FALSE 722.8063515 738.7578364 798.9690462 747.5812427 687.0097216 613.2194817 777.6000824 654.7550558 687.6637236 644.1111936 1.122176355 1.146941466 1.240420993 1.160640042 1.066601122 0.952039784 1.2072451 1.016524883 1.067616478 1 9.331165954 -6.261476806 4.983022997 1.054674341 1.172189056 0.410739384 0.068045986 0.190567181 14.79781928 0.020779799 0.025341598 5.48E-07 6.261476806 0.117514715 TNATSPGVNSST(ph)SPQSTDK ddPTM_A459_MK2206_30min_R1 2 TNATSPGVNSSTSPQSTDK 19 0 B7ZM87;O75044 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 TNATSPGVNS(0.118)S(0.118)T(0.426)S(0.338)PQSTDK;TNATSPGVNS(0.009)S(0.009)T(0.678)S(0.302)PQS(0.002)TDK 190.1 3.57E-15 6272300 3666.7 4148 4121.6 3909.8 3141.8 3117.6 3892.4 3584.9 3871.4 3402.3 TRUE FALSE 3354.82791 3877.964446 3841.837275 4210.933473 3016.655453 3294.115818 3632.745098 3553.557597 4273.845884 3823.80261 0.877353842 1.014164391 1.004716422 1.101242376 0.788915057 0.861476429 0.950034682 0.929325585 1.117695216 1 11.90079234 -8.246851178 24.36279399 1.05884761 0.943407852 0.226611533 0.087056989 798.892481 1334185.154 0.062560565 0.023412334 5.66E-09 8.246851178 -0.115439759 TNATSPGVNSST(ph)SPQSTDK ddPTM_A459_MK2206_30min_R2 2 TNATSPGVNSSTSPQSTDK 19 0 B7ZM87;O75044 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 TNAT(0.001)S(0.003)PGVNS(0.187)S(0.187)T(0.62)S(0.003)PQSTDK;TNATSPGVNS(0.007)S(0.007)T(0.932)S(0.054)PQSTDK 268.37 3.37E-58 17468300 85022 89434 83938 85617 99562 70705 102091 78786 75011 92920 TRUE FALSE 91531.34969 84992.83761 86736.45103 78621.81722 95652.69562 73395.72832 88686.32907 89083.60071 81535.32119 89888.02801 1.018281875 0.945541242 0.964938857 0.874663945 1.064131651 0.816523957 0.986631157 0.991050785 0.907076537 1 16.45584136 -10.60561711 4.066690635 1.000008558 0.951470636 0.042676362 0.068012026 61657744.03 4.44964E+11 8491564.79 0.015826689 2.48E-11 10.60561711 -0.048537922 TNATSPGVNSSTS(ph)PQSTDK ddPTM_A459_MK2206_30min_R2 1 TNATSPGVNSSTSPQSTDK 19 0 B7ZM87;O75044 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 TNATSPGVNS(0.007)S(0.108)T(0.419)S(0.466)PQSTDK 137.13 0.00016545 11612000 29881 35487 33766 31130 29031 23391 37419 26094 24879 28815 TRUE FALSE 32168.71233 33724.76718 34891.74159 28586.57942 27891.09707 24281.1609 32505.84035 29504.57539 27042.93045 27874.76891 1.154044091 1.209867149 1.251732048 1.025536015 1.000585768 0.871080258 1.166138469 1.058468879 0.970158014 1 14.76667222 -5.772279229 24.35302768 1.015507263 1.205679691 0.594493086 0.072677005 106.3083763 238834.7199 0.021218095 0.031846903 1.69E-06 5.772279229 0.190172429 TNEKVELQELNDR ddPTM_A459_MK2206_30min_R1 2 TNEKVELQELNDR 13 1 P08670;B0YJC4;A0A1B0GTT5;P17661 P08670 VIM;DES Vimentin;Desmin 0 ; 147.7 0.026767 14285900 2539.8 2366 2218.8 2771.7 2640.1 2193.49 2407.3 2346.7 1572.11 1090.67 FALSE TRUE 2323.776673 2211.97297 2068.194038 2985.176814 2534.939226 2317.683508 2246.713409 2326.183049 1735.53646 1225.790434 1.895737321 1.804527845 1.687232973 2.435307645 2.06800376 1.890766516 1.8328691 1.897700443 1.415850877 1 10.25949664 -8.473194529 1.638178231 0.996432732 1.956957086 0.722920557 0.190028095 0.208282878 1.229020821 0.193155444 0.056238576 3.36E-09 8.473194529 0.960524354 TNEKVELQELNDR ddPTM_A459_MK2206_30min_R2 1 TNEKVELQELNDR 13 1 P08670;B0YJC4;A0A1B0GTT5;P17661 P08670 VIM;DES Vimentin;Desmin 0 160.87 0.0010253 28158000 46227 96956 78607 112660 104120 93010 92988 66872 98977 85386 FALSE TRUE 49766.17466 92141.30603 81227.71815 103455.3176 100031.7256 96549.56073 80778.5639 75612.40001 107585.8406 82599.86181 0.602497069 1.115514046 0.983388063 1.252487781 1.211039867 1.168882836 0.977950352 0.91540589 1.302494195 1 16.33385175 -4.760557742 24.97690093 1.102832651 0.602496478 0.594076305 0.124120745 15.43584102 437051.0965 0.031368697 0.18458735 1.74E-05 4.760557742 -0.500336173 TNGHS(ph)PSQPR ddPTM_A459_MK2206_30min_R2 2 TNGHSPSQPR 10 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5;C9JVY5 AKAP2 A-kinase anchor protein 2 1 TNGHS(0.867)PS(0.133)QPR;T(0.008)NGHS(0.992)PSQPR 96.371 0.0144 12574400 38878.1 23597.5 29636 28130.9 44902 28680.9 35140.4 53280.3 50665.5 41020.1 TRUE FALSE 41854.63723 22425.68246 30624.04945 25832.51548 43138.92187 29772.37175 30526.42327 60244.21815 55072.29361 39681.6175 1.05476137 0.565140331 0.771743981 0.650994519 1.087126095 0.750281204 0.769283744 1.518189579 1.387854051 1 15.27618321 -7.751631002 24.9991949 1.339766366 0.798972229 0.573806198 0.194581018 122.0096964 310975.3267 0.089484718 0.050852258 1.77E-08 7.751631002 -0.540794137 TNILQYAS(ph)TRPPTLSPIPHIPR ddPTM_A459_MK2206_30min_R2 1 TNILQYASTRPPTLSPIPHIPR 22 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TNILQY(0.07)AS(0.26)T(0.26)RPPT(0.196)LS(0.214)PIPHIPR 52.541 0.016153 41362000 39946 44766 41494 37990 38374 39749 45896 40988 37409 54576 TRUE FALSE 43004.29647 42542.98554 42877.38925 34886.09548 36867.24395 41261.67605 39869.80007 46345.27233 40662.7672 52795.18959 0.814549523 0.805811777 0.812145758 0.660781707 0.698306877 0.781542341 0.755178651 0.877831346 0.770198337 1 15.68811886 -9.225789407 0.642922716 1.006474267 0.760625367 0.586488344 0.057283968 1.898475412 1.132634351 0.094570781 0.024212748 5.95E-10 9.225789407 -0.2458489 TNILQYASTRPPT(ph)LSPIPHIPR ddPTM_A459_MK2206_30min_R2 1 TNILQYASTRPPTLSPIPHIPR 22 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TNILQY(0.003)AS(0.012)T(0.034)RPPT(0.475)LS(0.475)PIPHIPR 71.735 0.0046411 20128000 7602 9838.6 9577.1 9840.5 8832.7 8722.2 12299 8128.8 11402 8535.1 TRUE FALSE 8184.014965 9350.029431 9896.395734 9036.499672 8485.883817 9054.129433 10684.12653 9191.26207 12393.72535 8256.600386 0.991208801 1.132430903 1.19860418 1.094457676 1.027769714 1.096592909 1.294010371 1.113201759 1.501068814 1 13.01133217 -7.244228207 22.60388876 1.236503701 1.094384277 0.205746371 0.131086227 354.6237729 465736.8778 0.047539514 0.036689729 5.70E-08 7.244228207 -0.142119424 TNILQYASTRPPTLS(ph)PIPHIPR ddPTM_A459_MK2206_30min_R1 2 TNILQYASTRPPTLSPIPHIPR 22 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TNILQY(0.002)AS(0.014)T(0.014)RPPT(0.148)LS(0.822)PIPHIPR;TNILQY(0.001)AS(0.009)T(0.009)RPPT(0.052)LS(0.929)PIPHIPR 65.954 0.0028398 132714000 7844.1 8223.6 8438.5 6326.8 6985.1 7399.2 8212.6 6334.8 8327.4 7948.8 TRUE FALSE 7176.918104 7688.242145 7865.718131 6814.091232 6706.868676 7818.13631 7664.752439 6279.415511 9193.06303 8933.557354 0.803366209 0.860602539 0.880468756 0.762752279 0.750750055 0.875142566 0.857973161 0.70290202 1.029048414 1 13.12501906 -8.280318375 24.90075184 1.014524284 0.81565207 0.67341089 0.056434061 535.4191251 706192.5006 0.054759731 0.014232852 5.24E-09 8.280318375 -0.198872214 TNILQYASTRPPTLS(ph)PIPHIPR ddPTM_A459_MK2206_30min_R2 1 TNILQYASTRPPTLSPIPHIPR 22 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TNILQY(0.001)AS(0.006)T(0.006)RPPT(0.057)LS(0.93)PIPHIPR 67.312 0.0025099 21609000 47381 48237 39791 56237 44987 44200 62275 46741 36629 50829 TRUE FALSE 51008.52579 45841.62072 41117.61208 51642.25721 43220.58434 45882.06197 54098.21769 52850.20919 39814.92421 49170.45389 1.037381634 0.932300133 0.836226002 1.050270093 0.878995025 0.933122604 1.100217985 1.074836716 0.809732696 1 15.58550405 TNKPST(ph)PTTATR ddPTM_A459_MK2206_30min_R1 1 TNKPSTPTTATR 12 1 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5;A0A2R8YEA0 A0A2R8Y7K2 SPAST Spastin 1 T(0.025)NKPS(0.169)T(0.553)PT(0.249)T(0.006)ATR 123.68 0.033562 7123200 2346.8 1882.9 2481.5 1774.3 1764.7 1839.4 2596.2 2201.4 2067.2 2234.8 TRUE FALSE 2147.192336 1760.322868 2313.062694 1910.956893 1694.408262 1943.545238 2423.012235 2182.153392 2282.092838 2511.663896 0.854888403 0.700859247 0.920928432 0.760833046 0.674615845 0.77380785 0.964704011 0.868807883 0.908598018 1 11.2944277 -7.252540433 24.43388712 0.924594802 0.777956129 0.51276876 0.073454734 417.6193667 1146661.877 0.028520459 0.021745682 5.59E-08 7.252540433 -0.146638673 TNLQPLESTQS(ph)QDF ddPTM_A459_MK2206_30min_R1 2 TNLQPLESTQSQDF 14 0 Q9Y248 Q9Y248 GINS2 DNA replication complex GINS protein PSF2 1 TNLQPLEST(0.006)QS(0.993)QDF;TNLQPLESTQS(1)QDF 137.01 0.0005905 11786900 12195.4 12775.4 12187.7 9190.1 12405.7 10775 11475.7 11182.1 10609.7 9486.8 TRUE FALSE 11158.11719 11943.71914 11360.43288 9897.923094 11911.5547 11385.07119 10710.17699 11084.33608 11712.61628 10662.09641 1.046521881 1.120203634 1.065497108 0.928328043 1.117186925 1.067807939 1.004509487 1.039601937 1.098528454 1 13.38020351 -7.780802343 0.005495088 6.65E-08 2.087350376 0.052765797 0.054913439 12148.17851 64.99025705 12315.39846 12365.65465 1.66E-08 7.780802343 2.087350309 TNLQPLESTQS(ph)QDF ddPTM_A459_MK2206_30min_R2 2 TNLQPLESTQSQDF 14 0 Q9Y248 Q9Y248 GINS2 DNA replication complex GINS protein PSF2 1 TNLQPLEST(0.001)QS(0.999)QDF;TNLQPLESTQS(1)QDF 160.79 0.00028805 6041300 90688 110931 105245 108726 105053 109312 105988 80004 95577 96943 TRUE FALSE 97631.14301 105422.3278 108753.8158 99842.738 100928.0914 113471.9448 92071.64829 90460.79749 103890.1147 93779.75785 1.041068406 1.124148007 1.159672602 1.064651267 1.076224696 1.209983341 0.981785946 0.96460899 1.107809586 1 16.51698893 -7.290986238 24.99887018 1.010601869 1.111451908 0.415434678 0.057521662 710.9460164 601511.3394 0.023778293 0.016033888 5.12E-08 7.290986238 0.100850038 TNLTSQSSTTNLPGSPGSPGSPGS(ph)PGSPGSVPK ddPTM_A459_MK2206_30min_R2 1 TNLTSQSSTTNLPGSPGSPGSPGSPGSPGSVPK 33 0 Q6IN85-2;Q6IN85;Q6IN85-4 Q6IN85-2 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A 1 TNLTSQSSTTNLPGSPGS(0.004)PGS(0.055)PGS(0.933)PGS(0.008)PGS(0.001)VPK 114.92 1.38E-18 2717800 10314 15658 11163 14781 14055 9982.6 13589 10568 13171 11949 TRUE FALSE 11103.64777 14880.44649 11535.16885 13573.34502 13503.13008 10362.49484 11804.74798 11949.27389 14316.58977 11559.10511 0.960597526 1.287335512 0.997929229 1.174255696 1.168181269 0.896478987 1.021251028 1.033754237 1.238555203 1 13.49674209 TNNDILS(ph)SCEIK ddPTM_A459_MK2206_30min_R2 1 TNNDILSSCEIK 12 0 E7EPP7;Q6ZWJ1;B5MCT9;Q6ZWJ1-2 E7EPP7 STXBP4 Syntaxin-binding protein 4 1 TNNDILS(0.566)S(0.433)CEIK 83.692 0.033949 4415500 18329 21563 28088 23010 22701 20744 28495 19235 19941 24660 TRUE FALSE 19732.28233 20492.21278 29024.4399 21130.00939 21809.64468 21533.42746 24753.57227 21749.08054 21675.43213 23855.34622 0.827163947 0.859019718 1.216684916 0.885755721 0.914245573 0.902666734 1.037653029 0.911706766 0.908619474 1 14.542025 -11.19257098 4.134529379 1.002384568 0.944655297 0.026302148 0.105984668 0.002439515 0.000194893 0.107461426 0.024998362 6.42E-12 11.19257098 -0.057729271 TNNNQILEVKS(ph)PIK ddPTM_A459_MK2206_30min_R1 1 TNNNQILEVKSPIK 14 1 P42568-2;P42568;A0A0D9SF09;B1APT5 P42568-2 MLLT3 Protein AF-9 1 TNNNQILEVKS(1)PIK 135.23 0.0028718 13795000 2376.3 2514.8 3377.5 2843.5 1889.3 1907.5 2182.5 2297.4 2690.1 2227.2 TRUE FALSE 2174.183207 2351.086063 3148.24471 3062.506863 1814.04518 2015.501002 2036.909407 2277.314074 2969.745522 2503.122351 0.868588468 0.939261344 1.257727058 1.223474698 0.724712949 0.805194761 0.813747441 0.909789357 1.186416445 1 11.2895131 -4.995676618 23.40737937 0.981236494 0.886256377 0.041841111 0.175454186 273.2218353 1479028.911 0.048140267 0.182696762 1.01E-05 4.995676618 -0.094980117 TNNNQILEVKS(ph)PIK ddPTM_A459_MK2206_30min_R2 4 TNNNQILEVKSPIK 14 1 P42568-2;P42568;A0A0D9SF09;B1APT5 P42568-2 MLLT3 Protein AF-9 1 TNNNQILEVKS(1)PIK;TNNNQILEVKS(1)PIK;T(0.001)NNNQILEVKS(0.999)PIK;TNNNQILEVKS(1)PIK 149.97 0.0020414 174056800 363984 383897 387427 336064 389253 228361 460648 334159 278975 385369 TRUE FALSE 391850.8949 364833.2332 400343.6228 308606.4962 373968.9714 237051.4379 400164.3643 377834.7286 303239.7412 372794.4411 1.051117859 0.97864451 1.073899122 0.827819469 1.003150611 0.635877073 1.073418271 1.013520286 0.813423452 1 18.50802082 -5.750401381 24.99697222 0.909483067 1.028962905 0.178500023 0.122663821 396.8850828 898789.1616 0.032835135 0.056188196 1.78E-06 5.750401381 0.119479838 TNNNQILEVKS(ph)PIKQSK ddPTM_A459_MK2206_30min_R2 1 TNNNQILEVKSPIKQSK 17 2 P42568-2;P42568;A0A0D9SF09;B1APT5 P42568-2 MLLT3 Protein AF-9 1 T(0.003)NNNQILEVKS(0.992)PIKQS(0.005)K 53.565 0.033633 6733000 22073 60595 47961 50265 90300 38851 62193 38704 86393 49917 TRUE FALSE 23762.92585 57585.94041 49559.9958 46158.18871 86754.36828 40329.50203 54026.98439 43762.74569 93907.30698 48288.21238 0.492106141 1.192546536 1.026337347 0.955889366 1.796595152 0.835183165 1.11884416 0.906282166 1.944725273 1 15.55938344 -4.7611297 24.35632092 1.186510705 0.49210519 0.260578188 0.355990814 7.4181618 582131.0019 0.084386175 0.478554879 1.73E-05 4.7611297 -0.694405515 TNPPTQKPPS(ph)PPMSGR ddPTM_A459_MK2206_30min_R1 4 TNPPTQKPPSPPMSGR 16 1 A0A0A0MRT6;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0;B6VEX4;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7 A0A0A0MRT6 ABI1 Abl interactor 1 1 TNPPTQKPPS(1)PPMSGR;TNPPTQKPPS(1)PPMSGR;TNPPT(0.001)QKPPS(0.979)PPMS(0.02)GR;TNPPTQKPPS(1)PPMSGR 234.82 3.11E-15 184094000 8317.8 10438 9962.4 8847.7 6246.46 5751.92 7571.3 8034.4 8021.5 7879.8 TRUE FALSE 7610.327431 9758.484303 9286.180045 9529.151387 5997.650271 6077.58874 7066.232392 7964.156088 8855.36363 8856.009113 0.859340515 1.101905404 1.048573903 1.076009664 0.677240752 0.686267218 0.797902565 0.899294026 0.999927114 1 13.11244099 -6.241450625 24.95652927 0.828267933 1.029140568 0.33984817 0.12024979 890.4838586 1111794.306 0.037267838 0.048045957 5.74E-07 6.241450625 0.200872634 TNPPTQKPPS(ph)PPMSGR ddPTM_A459_MK2206_30min_R2 5 TNPPTQKPPSPPMSGR 16 1 A0A0A0MRT6;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0;B6VEX4;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7 A0A0A0MRT6 ABI1 Abl interactor 1 1 TNPPT(0.037)QKPPS(0.706)PPMS(0.257)GR;TNPPTQKPPS(0.639)PPMS(0.361)GR;TNPPT(0.009)QKPPS(0.965)PPMS(0.026)GR;TNPPTQKPPS(0.985)PPMS(0.015)GR;TNPPT(0.001)QKPPS(0.5)PPMS(0.5)GR 103.75 0.0048035 600288200 131600 137916 149028 131311 129023 89737 152792 132602 116271 142482 TRUE FALSE 141675.3972 131067.292 153996.5191 120582.4713 123956.9087 93152.00442 132730.2269 149933.5367 126384.0414 137832.824 1.027878506 0.950914943 1.117270289 0.87484583 0.899327933 0.675833243 0.962979811 1.087792678 0.916937183 1 17.07255997 -5.780704803 24.9991003 0.911628479 1.023910664 0.196104491 0.106147221 420.6693916 545865.4782 0.032182606 0.047815461 1.66E-06 5.780704803 0.112282185 TNPPTQKPPSPPMS(ph)GR ddPTM_A459_MK2206_30min_R2 1 TNPPTQKPPSPPMSGR 16 1 A0A0A0MRT6;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0;B6VEX4;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7 A0A0A0MRT6 ABI1 Abl interactor 1 1 TNPPT(0.001)QKPPS(0.155)PPMS(0.844)GR 82.367 0.011082 489760000 46040 45322 41573 38977 39127 25732 43919 33757 32263 47193 TRUE FALSE 49564.8578 43071.37538 42959.02307 35792.45442 37590.67738 26711.24929 38152.38254 38169.15581 35069.17742 45653.09627 1.085684474 0.943449161 0.94098816 0.784009352 0.823398202 0.585091735 0.835701971 0.836069378 0.768166461 1 15.47842509 -5.28839381 1.277899807 0.789004664 1.080032494 0.431294155 0.100142966 0.602894003 1.504943601 0.031106124 0.181364495 5.15E-06 5.28839381 0.291027829 TNPS(ph)PTNPFSSDLQK ddPTM_A459_MK2206_30min_R1 2 TNPSPTNPFSSDLQK 15 0 G3V3Z8;P49757-3;P49757;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5;P49757-4;P49757-2 G3V3Z8 NUMB Protein numb homolog 1 TNPS(0.991)PT(0.009)NPFSSDLQK;T(0.073)NPS(0.92)PT(0.008)NPFSSDLQK 252.33 3.23E-28 76521000 7073.5 8456.9 10362.5 8633 8680.7 8828.6 10044.8 9757.2 8363.4 8061.7 TRUE FALSE 6471.861681 7906.354273 9659.122372 9297.915156 8334.929337 9328.467702 9374.72972 9671.893829 9232.805359 9060.444259 0.714298493 0.872623245 1.066076022 1.026209631 0.919925017 1.029581711 1.034687644 1.067485606 1.019023471 1 13.14536608 -4.957645532 2.791108912 1.019926473 0.706008686 0.852938994 0.040230377 0.115410502 1.590830157 0.011238122 0.069673124 1.10E-05 4.957645532 -0.313917787 TNPS(ph)PTNPFSSDLQK ddPTM_A459_MK2206_30min_R2 3 TNPSPTNPFSSDLQK 15 0 G3V3Z8;P49757-3;P49757;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5;P49757-4;P49757-2 G3V3Z8 NUMB Protein numb homolog 1 TNPS(0.897)PT(0.103)NPFSSDLQK;TNPS(0.724)PT(0.276)NPFSSDLQK;TNPS(0.998)PT(0.002)NPFSSDLQK 289.5 3.73E-67 40962400 85973 86413 93553 104164 130154 99859 151145 100760 92447 113829 TRUE FALSE 92555.15898 82121.85608 96672.01033 95653.468 125043.5 103659.2042 131299.4799 113929.678 100487.873 110114.7691 0.840533561 0.74578421 0.877920475 0.86867065 1.135574284 0.941374214 1.192387552 1.034644843 0.912573979 1 16.74864846 -6.10118691 4.723304216 1.040485968 0.821663461 0.589062694 0.083478994 0.155454776 5.598443658 0.024745639 0.032711276 7.92E-07 6.10118691 -0.218822507 TNPSPT(ph)NPFSSDLQK ddPTM_A459_MK2206_30min_R1 1 TNPSPTNPFSSDLQK 15 0 G3V3Z8;P49757-3;P49757;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5;P49757-4;P49757-2 G3V3Z8 NUMB Protein numb homolog 1 TNPS(0.049)PT(0.95)NPFSSDLQK 105.66 0.010937 7031700 1391.1 1751.2 1644.5 2018.5 1466.2 1356 1656.3 1868 1694.6 1360.8 TRUE FALSE 1272.77964 1637.196562 1532.875922 2173.96522 1407.798149 1432.775548 1545.811249 1851.668273 1870.759734 1529.386178 0.832215995 1.070492584 1.002281794 1.421462579 0.920498805 0.936830455 1.01073965 1.210726434 1.223209521 1 10.57873702 -7.755124576 24.97995803 1.162725987 1.0359666 0.0986809 0.157698263 334.3434496 1322603.298 0.077971927 0.043602011 1.76E-08 7.755124576 -0.126759387 TNPSPT(ph)NPFSSDLQK ddPTM_A459_MK2206_30min_R2 1 TNPSPTNPFSSDLQK 15 0 G3V3Z8;P49757-3;P49757;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5;P49757-4;P49757-2 G3V3Z8 NUMB Protein numb homolog 1 TNPS(0.321)PT(0.665)NPFS(0.011)S(0.003)DLQK 114.87 0.0057069 8712400 23761 24894 26778 30713 35582 26711 37216 30530 26129 32690 TRUE FALSE 25580.16043 23657.80016 27670.76515 28203.64965 34184.87189 27727.50582 32329.4945 34520.37583 28401.65319 31623.32798 0.808901595 0.748112285 0.875011168 0.891862162 1.081001719 0.876805434 1.022330557 1.0916111 0.898123474 1 14.94870158 -5.753017139 1.725828125 0.995037269 0.779937516 0.595496294 0.069208655 0.239164124 1.447969861 0.021163943 0.045177879 1.77E-06 5.753017139 -0.215099753 TNQELQEINR ddPTM_A459_MK2206_30min_R1 2 TNQELQEINR 10 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YMM1;H0YNA0;H0YN52;H0YLE2 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 152.04 0.015465 8905700 1978.27 2122.02 2038.13 1727.43 2055.61 1926.67 2280.7 2066.34 1860.26 1588.93 FALSE TRUE 1810.007748 1983.876112 1899.787414 1860.476958 1973.730701 2035.75639 2128.558664 2048.274207 2053.640684 1785.778644 1.013567809 1.110930584 1.06384261 1.041829548 1.105249358 1.139982493 1.191949893 1.146992218 1.149997336 1 10.80233755 -6.50919107 3.59231721 1.138614738 1.062092237 0.256292637 0.052416356 0.278806976 7.706392695 0.016718266 0.017925168 3.10E-07 6.50919107 -0.076522501 TNQELQEINR ddPTM_A459_MK2206_30min_R2 2 TNQELQEINR 10 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33;H0YKS4;H0YMM1;H0YNA0;H0YN52;H0YLE2 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 169.58 0.0032 146482000 170459 199223 195719 210221 197877 189291 193805 158685 210688 210064 FALSE TRUE 183509.4721 189329.8755 202244.1738 193045.2718 190107.3547 196494.6016 168358.1707 179425.6743 229013.2614 203209.6289 0.903055003 0.931697364 0.99524897 0.949980928 0.93552336 0.966955172 0.828495045 0.882958526 1.126980363 1 17.63260924 -8.256303604 24.99675275 1.063490185 0.926321464 0.533219886 0.052085641 312.9888867 1523392.803 0.039080159 0.013752332 5.54E-09 8.256303604 -0.137168722 TNRT(ph)SQDYDQLPSCSDGSQAPARPPKPR ddPTM_A459_MK2206_30min_R2 1 TNRTSQDYDQLPSCSDGSQAPARPPKPR 28 3 Q13191 Q13191 CBLB E3 ubiquitin-protein ligase CBL-B 1 T(0.112)NRT(0.344)S(0.344)QDY(0.201)DQLPSCSDGSQAPARPPKPR 47.546 0.020261 6894700 9849.8 13182 10735 13866 15497 14482 15930 10105 11162 13712 TRUE FALSE 10603.90826 12527.40105 11092.89954 12733.10344 14888.50991 15033.12266 13838.37186 11425.7582 12132.85058 13264.57856 0.799415391 0.944425108 0.836279833 0.959932755 1.122426155 1.133328329 1.04325756 0.861373631 0.914680442 1 13.69529122 -5.943200015 5.332269925 1.015570373 0.870439464 0.389490021 0.084895051 0.238823368 14.11818466 0.027325471 0.040792577 1.14E-06 5.943200015 -0.145130909 TNS(ph)MGSATGPLPGTK ddPTM_A459_MK2206_30min_R1 1 TNSMGSATGPLPGTK 15 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 T(0.052)NS(0.86)MGS(0.088)ATGPLPGTK 232.01 4.96E-14 15436000 2377.8 2532 2415.6 1922 2288.8 2464.6 4657.7 5521.6 6052 4974.4 TRUE FALSE 2175.555624 2367.16634 2251.635802 2070.032773 2197.632249 2604.143522 4346.993331 5473.325233 6681.127057 5590.666227 0.389140674 0.423413998 0.402749102 0.370265848 0.39308951 0.465802002 0.777544778 0.979011268 1.195050247 1 12.4488045 -7.495660701 1.691072225 1.095589806 0.393580751 0.97228912 0.049987469 0.053040613 0.295270481 0.03082045 0.015436238 3.19E-08 7.495660701 -0.702009056 down TNS(ph)MGSATGPLPGTK ddPTM_A459_MK2206_30min_R2 3 TNSMGSATGPLPGTK 15 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 T(0.013)NS(0.707)MGS(0.279)AT(0.001)GPLPGTK;T(0.049)NS(0.947)MGS(0.004)ATGPLPGTK;T(0.016)NS(0.981)MGS(0.003)ATGPLPGTK 120.08 0.0018336 37488800 120714 145700 139073 133456 158768 150994 283199 256469 269196 340373 TRUE FALSE 129955.9567 138464.7499 143709.6244 122552.2179 152533.9706 156740.1825 246014.6311 289990.3789 292610.1815 329266.6569 0.394683014 0.420524663 0.43645362 0.372197474 0.463253619 0.476028104 0.747159258 0.880715896 0.888672373 1 18.3288969 -7.421400335 1.430945812 0.945335047 0.409045345 0.979912816 0.032635619 0.051667246 0.203589157 0.020811203 0.01068362 3.79E-08 7.421400335 -0.536289702 down TNS(ph)MQQLEQWIK ddPTM_A459_MK2206_30min_R2 1 TNSMQQLEQWIK 12 0 A0JP02;B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;Q9HAU0-3 A0JP02 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 T(0.108)NS(0.892)MQQLEQWIK 119.56 0.0034802 0 8674.1 13887 8637.3 10745 9280.9 10942 10155 7606.1 7863.8 9049.6 TRUE FALSE 9338.195765 13197.39177 8925.263271 9867.099128 8916.485233 11358.40548 8821.636302 8600.243386 8547.77911 8754.312293 1.066696669 1.507530384 1.019527631 1.127112993 1.018524921 1.297464049 1.007690382 0.982400798 0.976407835 1 13.09577813 -6.235407743 0.381051489 0.966638513 1.302346057 0.236974524 0.142908435 2.933280566 0.724520203 0.144848524 0.407427572 5.82E-07 6.235407743 0.335707544 TNS(ph)PAYSDISDAGEDGEGKVDSVK ddPTM_A459_MK2206_30min_R2 1 TNSPAYSDISDAGEDGEGKVDSVK 24 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 T(0.157)NS(0.478)PAY(0.034)S(0.225)DIS(0.106)DAGEDGEGKVDSVK 99.774 3.46E-06 10660000 20510 25823 22392 19390 24689 14953 27019 19748 18731 22491 TRUE FALSE 22080.26137 24540.66737 23138.5381 17805.77497 23719.58581 15522.04689 23471.37284 22329.13141 20360.18852 21757.12051 1.014852189 1.127937282 1.063492666 0.818388397 1.09019876 0.713423768 1.078790405 1.026290744 0.935794262 1 14.40920001 -5.558934599 24.89257557 0.953047768 1.077475018 0.187139869 0.111583691 243.7377638 168272.7895 0.029029618 0.050281002 2.76E-06 5.558934599 0.12442725 TNS(ph)SSSSPVVLK ddPTM_A459_MK2206_30min_R1 1 TNSSSSSPVVLK 12 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4;Q7Z589-2 Q7Z589 EMSY;C11orf30 Protein EMSY 1 T(0.011)NS(0.409)S(0.409)S(0.044)S(0.082)S(0.045)PVVLK 89.466 0.02574 8398800 2054.5 2108.7 1879 1693.7 1749.5 1432 2018.5 2195.7 2105.9 2050.2 TRUE FALSE 1879.753986 1971.423247 1751.458715 1824.149067 1679.81371 1513.078602 1883.849548 2176.503226 2324.815841 2304.194254 0.815796664 0.855580315 0.760117647 0.791664619 0.729024346 0.656662779 0.817574102 0.944583219 1.008949587 1 11.17004663 -7.782309911 2.979683853 0.996887636 0.768938896 0.791049087 0.050286113 0.126321412 2.26895565 0.034493577 0.015599856 1.65E-08 7.782309911 -0.22794874 TNS(ph)TGGSSGSSVGGGSGK ddPTM_A459_MK2206_30min_R2 4 TNSTGGSSGSSVGGGSGK 18 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 TNS(0.991)T(0.008)GGS(0.001)SGSSVGGGSGK;T(0.005)NS(0.694)T(0.301)GGSSGSSVGGGSGK;TNS(0.993)T(0.006)GGSSGSSVGGGSGK;T(0.001)NS(0.98)T(0.019)GGSSGSSVGGGSGK 237.84 6.90E-25 251676900 158548.8 166620.4 156986.3 160552.7 164241.1 116047.9 174375.4 142372 138034 168652.8 TRUE FALSE 170687.418 158346.2732 162220.1449 147435.0308 157792.1692 120464.1842 151479.7005 160980.5092 150039.9478 163149.6729 1.046201411 0.970558325 0.994302605 0.903679598 0.967162032 0.738366078 0.928470758 0.986704456 0.919646023 1 17.31583657 -5.459936618 1.415632669 0.913595689 1.025086394 0.217166631 0.07072671 0.785830022 2.821115533 0.022905803 0.086441808 3.47E-06 5.459936618 0.111490704 TNSAEVT(ph)PPVLSVMGEATPVSIEPR ddPTM_A459_MK2206_30min_R1 2 TNSAEVTPPVLSVMGEATPVSIEPR 25 0 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 T(0.005)NS(0.005)AEVT(0.99)PPVLSVMGEATPVSIEPR;T(0.031)NS(0.031)AEVT(0.937)PPVLSVMGEATPVSIEPR 177.69 2.84E-20 4995600 1951.28 1861.6 1937.31 1477.13 1503.19 1600.37 1920.16 1624.98 1398.21 1314.72 TRUE FALSE 1785.313389 1740.409502 1805.810795 1590.898809 1443.314759 1690.981566 1792.06963 1610.772971 1543.558933 1477.597439 1.208254252 1.177864454 1.22212637 1.076679457 0.976798363 1.144412897 1.212826703 1.09012978 1.044641045 1 10.52903756 -1.522878745 0.116356103 0.978280719 1.67571452 0.372008993 0.068133125 132.3937086 1.069068822 0.589196378 14.90464582 0.03 1.522878745 0.697433801 TNSGISSASGGSTEPT(ph)TPDSERPAQALLR ddPTM_A459_MK2206_30min_R1 2 TNSGISSASGGSTEPTTPDSERPAQALLR 29 1 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4;A0A0J9YW54 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 TNSGISSASGGS(0.001)T(0.001)EPT(0.333)T(0.333)PDS(0.333)ERPAQALLR;TNSGISSASGGST(0.001)EPT(0.482)T(0.482)PDS(0.036)ERPAQALLR 77.03 6.99E-05 31460000 872.93 823.02 712.1 672.19 1164.3 812.93 1217.59 1162.92 910.79 1151.52 TRUE FALSE 798.6827196 769.4412484 663.764636 723.9621903 1117.923466 858.9573941 1136.366793 1152.752713 1005.46988 1294.178991 0.617134666 0.594540055 0.512884725 0.559398812 0.863809004 0.663708343 0.878059991 0.890721238 0.77691717 1 10.33782145 -6.645514054 0.855442213 0.88993522 0.557173388 0.687694958 0.088741429 0.355899421 0.572972567 0.053981906 0.057430049 2.26E-07 6.645514054 -0.332761832 TNSGISSASGGSTEPTT(ph)PDSERPAQALLR ddPTM_A459_MK2206_30min_R2 2 TNSGISSASGGSTEPTTPDSERPAQALLR 29 1 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4;A0A0J9YW54 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 TNSGIS(0.001)S(0.001)AS(0.002)GGS(0.002)T(0.002)EPT(0.132)T(0.764)PDS(0.096)ERPAQALLR;TNSGISSASGGSTEPT(0.025)T(0.71)PDS(0.265)ERPAQALLR 99.722 1.35E-07 37515000 12049.3 15778.7 10165.6 11554.8 13931.1 10281.3 14782.9 13281.4 10523.8 13931.8 TRUE FALSE 12971.80367 14995.1527 10504.51603 10610.73588 13384.09502 10672.56208 12841.88747 15017.32458 11439.1411 13477.20651 0.962499437 1.112630625 0.779428291 0.787309735 0.993091188 0.791897198 0.952859739 1.114275764 0.848776866 1 13.71823387 -7.520591269 24.98445907 0.995629334 0.904074422 0.09597754 0.114999679 215.3702242 2352421.066 0.054212642 0.031954489 3.02E-08 7.520591269 -0.091554911 TNSMGS(ph)ATGPLPGTK ddPTM_A459_MK2206_30min_R1 1 TNSMGSATGPLPGTK 15 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 T(0.001)NS(0.021)MGS(0.804)AT(0.174)GPLPGTK 158.14 0.00014873 14788000 2803.8 2655.9 2705 2546.8 2522.4 3071.3 4960.2 6317.7 7029 6720.4 TRUE FALSE 2565.322087 2483.000427 2521.392137 2742.954977 2421.927467 3245.194352 4629.314108 6262.465015 7759.689704 7552.973888 0.339643977 0.328744739 0.333827731 0.363162248 0.32065879 0.429657827 0.612912765 0.829138973 1.027368798 1 12.88282908 -7.655656043 1.301801173 1.027372871 0.335066959 0.992870914 0.02317638 0.032905741 0.103629582 0.018039186 0.007545053 2.21E-08 7.655656043 -0.692305912 down TNSMSSSGLGS(ph)PNR ddPTM_A459_MK2206_30min_R1 6 TNSMSSSGLGSPNR 14 0 F8VVY1;F8VX63;F8VP97;Q9NZN8-4;Q9NZN8-5;Q9NZN8;F8VQD8;A0A087X050;F8VUB4;F8VV52 F8VVY1 CNOT2 CCR4-NOT transcription complex subunit 2 1 TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR 218.2 1.08E-08 293425900 10612.5 10409.2 11215 9361.3 11164 10067.5 10461.7 11151.8 8946.5 9027.5 TRUE FALSE 9709.851147 9731.559188 10453.75705 10082.30895 10719.31424 10637.51315 9763.819081 11054.30099 9876.52069 10145.89485 0.957022647 0.959162235 1.030343523 0.993732844 1.056517379 1.048454898 0.962341836 1.089534353 0.973449935 1 13.30860849 -5.255914112 23.55495595 1.021918058 0.958092419 0.302088919 0.037040317 221.3179386 943488.9654 0.008884401 0.022137536 5.55E-06 5.255914112 -0.063825639 TNSMSSSGLGS(ph)PNR ddPTM_A459_MK2206_30min_R2 3 TNSMSSSGLGSPNR 14 0 F8VVY1;F8VX63;F8VP97;Q9NZN8-4;Q9NZN8-5;Q9NZN8;F8VQD8;A0A087X050;F8VUB4;F8VV52 F8VVY1 CNOT2 CCR4-NOT transcription complex subunit 2 1 TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR 147.51 0.0004773 237693000 55878 69846 67175 67489 77065 53432.5 75315 52955 54715 58433 TRUE FALSE 60156.06264 66377.54921 69414.58097 61974.93281 74039.04088 55465.91123 65426.05003 59876.40032 59474.0118 56526.336 1.064213018 1.174276521 1.228004252 1.096390412 1.309814966 0.981240164 1.157443674 1.059265549 1.052146946 1 15.78663556 -7.773467325 0.759564937 1.008058595 1.163961027 0.2757496 0.083843921 0.831132461 0.915358231 0.074110397 0.034439204 1.68E-08 7.773467325 0.155902433 TNSPAY(ph)SDISDAGEDGEGKVDSVK ddPTM_A459_MK2206_30min_R2 1 TNSPAYSDISDAGEDGEGKVDSVK 24 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 T(0.032)NS(0.143)PAY(0.581)S(0.238)DIS(0.005)DAGEDGEGKVDSVK 115.31 1.38E-06 11140000 23907 28428 24233 17702 27477 11074 23342 25104 20280 25463 TRUE FALSE 25737.3383 27016.30686 25040.91613 16255.68997 26398.11492 11495.42883 20277.16736 28385.17899 22043.91774 24632.1444 1.044867953 1.096790699 1.016595053 0.659938076 1.071693739 0.466684047 0.823199435 1.152363292 0.894924834 1 14.58825461 -5.542525277 24.72709701 0.861418568 1.067295293 0.175563791 0.186664233 338.1453269 425587.3518 0.051567253 0.089331169 2.87E-06 5.542525277 0.205876725 TNSS(ph)SSSPVVLK ddPTM_A459_MK2206_30min_R1 1 TNSSSSSPVVLK 12 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4;Q7Z589-2 Q7Z589 EMSY;C11orf30 Protein EMSY 1 T(0.001)NS(0.026)S(0.295)S(0.295)S(0.295)S(0.086)PVVLK 217.19 4.93E-08 24787000 3778.4 3675.9 3843.3 3259.3 3378.1 2429.8 3406.9 3903.6 3507.1 3777 TRUE FALSE 3457.027239 3436.598242 3582.427504 3510.331851 3243.543124 2567.373176 3179.631917 3869.471237 3871.675595 4244.923275 0.814390983 0.809578412 0.843932216 0.826948245 0.764099352 0.604810266 0.749043436 0.911552692 0.912071984 1 12.05152276 -7.842895533 4.782380531 0.941267909 0.772695723 0.573492532 0.0667141 0.181211711 7.335050205 0.043139665 0.02016147 1.44E-08 7.842895533 -0.168572186 TNSS(ph)SSSPVVLK ddPTM_A459_MK2206_30min_R2 2 TNSSSSSPVVLK 12 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4;Q7Z589-2 Q7Z589 EMSY;C11orf30 Protein EMSY 1 TNS(0.071)S(0.923)S(0.006)SSPVVLK;T(0.042)NS(0.024)S(0.838)S(0.074)S(0.022)SPVVLK 255.39 3.59E-19 63104000 197363 212450 202034 180949 178298 137488 216546 188383 175702 222370 TRUE FALSE 212473.263 201900.0419 208769.7127 166164.8879 171297.1246 142720.2022 188113.2501 213005.3049 190984.2424 215114.0851 0.987723621 0.93857193 0.970506941 0.77245006 0.796308268 0.663462842 0.874481325 0.990196922 0.887827695 1 17.71474247 -10.6829421 14.45368218 0.999999743 0.87207506 0.120183265 0.10043743 0 0 0.107777132 0.026139794 2.08E-11 10.6829421 -0.127924683 TNST(ph)GGSSGSSVGGGSGK ddPTM_A459_MK2206_30min_R1 6 TNSTGGSSGSSVGGGSGK 18 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 TNS(0.093)T(0.895)GGS(0.007)S(0.005)GSSVGGGSGK;T(0.002)NS(0.335)T(0.644)GGS(0.016)S(0.002)GS(0.001)S(0.001)VGGGSGK;TNS(0.092)T(0.903)GGS(0.004)SGSSVGGGSGK;TNS(0.095)T(0.895)GGS(0.008)S(0.001)GSS(0.001)VGGGSGK;TNS(0.199)T(0.417)GGS(0.077)S(0.17)GS(0.019)S(0.118)VGGGSGK;TNS(0.064)T(0.545)GGS(0.182)S(0.182)GS(0.013)S(0.013)VGGGSGK 270.73 1.15E-53 238433400 30463.9 29959.7 19435.9 17687.8 11558.15 11029.87 20770.6 21917.1 1879.586 14624.5 TRUE FALSE 27872.78533 28009.31808 18116.64526 19050.11742 11097.76441 11654.37171 19385.03117 21725.48111 2074.975691 16436.29347 1.695807232 1.704114017 1.102234229 1.159027579 0.675198726 0.709063253 1.179404055 1.321799294 0.126243529 1 14.00459737 -5.393672112 1.522132147 0.874408904 1.784769744 0.510936692 0.31738506 0.402239875 1.644514248 0.096385619 0.384112005 4.04E-06 5.393672112 0.910360839 TNST(ph)GGSSGSSVGGGSGK ddPTM_A459_MK2206_30min_R2 2 TNSTGGSSGSSVGGGSGK 18 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 TNS(0.336)T(0.659)GGS(0.005)SGSSVGGGSGK;T(0.118)NS(0.354)T(0.502)GGS(0.024)S(0.002)GSSVGGGSGK 157 5.15E-05 129154200 20446.6 17515.5 20276.3 18437.7 17565.5 12033.6 23278.7 14849.2 14936.1 21738.6 TRUE FALSE 22012.00742 16645.70574 20952.30172 16931.28093 16875.79021 12491.54708 20222.17873 16790.04142 16235.21498 21029.27126 1.046731822 0.791549338 0.996339886 0.805129228 0.802490491 0.594007606 0.961620518 0.798412899 0.772029367 1 14.36011124 -1.522880174 0.851292869 0.816355122 73.66942116 0.19278824 0.119386022 1116.724834 3.076443205 0.040336705 157574.6852 0.029999901 1.522880174 72.85306604 TNT(ph)PQGVLPSSQLK ddPTM_A459_MK2206_30min_R1 2 TNTPQGVLPSSQLK 14 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 T(0.109)NT(0.891)PQGVLPSSQLK;T(0.1)NT(0.9)PQGVLPSSQLK 176.04 0.00016099 16969400 4797.5 6745.8 5849.6 5624.6 3199.6 3073.5 4425.4 4273.2 5967 6057.2 TRUE FALSE 4389.447432 6306.647194 5452.54545 6057.807667 3072.153157 3247.518914 4130.189641 4235.839863 6587.291003 6807.611666 0.644785227 0.926411127 0.800948367 0.889857995 0.451282081 0.477042328 0.60670171 0.622221136 0.967636129 1 12.73293303 -10.57285514 10.46335238 0.999999031 0.703974193 0.202339119 0.172613091 2.53E-10 0 0.179545314 0.043546135 2.67E-11 10.57285514 -0.296024838 TNT(ph)PQGVLPSSQLK ddPTM_A459_MK2206_30min_R2 1 TNTPQGVLPSSQLK 14 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 T(0.312)NT(0.688)PQGVLPSSQLK 109.99 0.010271 20995000 94127 77030 70545 63939 62633 61041 98101 82504 66559 87450 TRUE FALSE 101333.4355 73204.80221 72896.93509 58714.97917 60173.71371 63363.95803 85220.22086 93287.55608 72348.18151 84596.51366 1.197844109 0.865340651 0.86170141 0.694059089 0.711302524 0.749013822 1.007372729 1.102735232 0.855214694 1 16.36831059 -10.19868844 10.87522727 0.999999945 0.886039795 0.037386124 0.157174217 0 0 0.163796997 0.039726607 6.33E-11 10.19868844 -0.11396015 TNT(ph)PVKEDWNVR ddPTM_A459_MK2206_30min_R1 1 TNTPVKEDWNVR 12 1 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347;A0A494C0Q7 A0A494C1K3 GTF2I General transcription factor II-I 1 T(0.009)NT(0.991)PVKEDWNVR 139.77 0.011713 8144000 1845.9 1904 2124.4 1783.1 1169.4 917.7 1412.7 1521.5 1633.9 1454.1 TRUE FALSE 1688.896512 1780.049254 1980.201647 1920.434671 1122.820322 969.6593809 1318.461361 1508.197686 1803.749752 1634.244886 1.033441516 1.089218188 1.211692118 1.175120502 0.687057571 0.593337871 0.806770988 0.92287129 1.103720604 1 10.67440847 -6.248864605 24.60738939 0.833212754 1.130666256 0.46263691 0.144341123 590.0261756 1154612.571 0.046892565 0.06009736 5.64E-07 6.248864605 0.297453501 TNT(ph)PVKEDWNVR ddPTM_A459_MK2206_30min_R2 1 TNTPVKEDWNVR 12 1 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347;A0A494C0Q7 A0A494C1K3 GTF2I General transcription factor II-I 1 T(0.002)NT(0.998)PVKEDWNVR 178.67 0.0010756 9279000 25325 25606 32798 23309 19138 18478 30355 21695 18125 29318 TRUE FALSE 27263.90147 24334.44327 33891.46895 21404.58014 18386.54596 19181.19324 26369.35204 24530.61099 19701.47974 28361.35606 0.96130458 0.858014096 1.194987605 0.754709334 0.648295727 0.67631439 0.929763442 0.864930821 0.6946593 1 14.79163889 -5.805299461 24.99947437 0.784388314 0.990094262 0.342631354 0.131718714 148.5081181 84646.32542 0.037468236 0.055574732 1.57E-06 5.805299461 0.205705948 TNTMNGS(ph)KSPVISR ddPTM_A459_MK2206_30min_R2 1 TNTMNGSKSPVISR 14 1 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6 ENAH Protein enabled homolog 1 T(0.001)NT(0.002)MNGS(0.744)KS(0.253)PVISR 66.201 0.038405 58697000 104480 112920 109010 137600 132570 84493 131360 109030 82056 123400 TRUE FALSE 112479.0691 107312.557 112644.339 126357.6398 127364.6357 87708.44032 114112.2742 123280.5954 89193.08256 119373.4681 0.942245131 0.898964893 0.943629609 1.058506901 1.066942577 0.734739819 0.955926606 1.032730282 0.747176772 1 16.86512269 TNTMNGSKS(ph)PVISR ddPTM_A459_MK2206_30min_R1 2 TNTMNGSKSPVISR 14 1 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6 ENAH Protein enabled homolog 1 TNTMNGS(0.002)KS(0.998)PVISR;TNTMNGS(0.094)KS(0.906)PVISR 248.67 1.07E-26 103225000 8019.5 8435.9 7774.2 6984.5 7775 6224.7 7423.8 7272.5 7226 5836.9 TRUE FALSE 7337.399413 7886.721377 7246.508964 7522.4474 7465.305286 6577.137135 6928.571847 7208.917299 7977.168558 6560.019238 1.118502728 1.202240587 1.104647517 1.14671118 1.138000517 1.002609428 1.056181635 1.098917097 1.216028226 1 12.67948433 -6.562098951 24.92089215 1.078717601 1.144244225 0.231432296 0.061122172 249.1346512 158300.7824 0.020432662 0.020432681 2.74E-07 6.562098951 0.065526624 TNTMNGSKS(ph)PVISR ddPTM_A459_MK2206_30min_R2 1 TNTMNGSKSPVISR 14 1 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6 ENAH Protein enabled homolog 1 TNTMNGS(0.01)KS(0.99)PVISR 202.01 0.00024651 23696000 38516 47645 39396 45969 42066 34600 50378 39571 36165 43116 TRUE FALSE 41464.81457 45279.01858 40709.44298 42213.18565 40414.27748 35916.72725 43763.30809 44743.06557 39310.56633 41709.12845 0.994142436 1.08559014 0.976031974 1.012085057 0.968955214 0.861123897 1.049250121 1.072740362 0.942493113 1 15.34807555 -5.289560434 24.64396647 0.986149777 1.039866312 0.121197277 0.058703315 1186.119859 1039458.641 0.016004308 0.033325281 5.13E-06 5.289560434 0.053716535 TNYNDRYDEIR ddPTM_A459_MK2206_30min_R1 2 TNYNDRYDEIR 11 1 P62424;Q5T8U2 P62424 RPL7A 60S ribosomal protein L7a 0 ; 144.17 0.0021949 66308000 12343.9 11663.8 11897.7 9957.7 12522.2 11088.7 11688.1 10534.2 10389.6 9339 FALSE TRUE 11293.98648 10904.4845 11090.11727 10724.64378 12023.41426 11716.53261 10908.40818 10442.1006 11469.6361 10495.98583 1.076029129 1.038919515 1.056605588 1.021785277 1.145525009 1.116287008 1.039293341 0.994866111 1.092764061 1 13.35755006 -8.896769165 0.647197356 1.00126167 1.068872413 0.160843426 0.042936016 2.741652014 2.172788527 0.051748797 0.018452911 1.27E-09 8.896769165 0.067610744 TNYNDRYDEIR ddPTM_A459_MK2206_30min_R2 2 TNYNDRYDEIR 11 1 P62424;Q5T8U2 P62424 RPL7A 60S ribosomal protein L7a 0 ; 111.52 0.023099 38107000 203561 251330 188202 246894 233133 222507 238746 229439 214461 206346 FALSE TRUE 219145.7867 238849.3177 194476.5607 226721.9704 223979.027 230974.6598 207398.3634 259427.4651 233114.4301 199612.9469 1.097853571 1.196562254 0.974268271 1.135807942 1.122066632 1.157112619 1.039002563 1.299652498 1.167832216 1 17.60684577 -7.720455027 24.99993601 1.175308772 1.105916958 0.054511077 0.089507717 312.0893821 190370.2886 0.040082933 0.023141634 1.90E-08 7.720455027 -0.069391814 TNYNDRYDEIRR ddPTM_A459_MK2206_30min_R2 1 TNYNDRYDEIRR 12 2 P62424;Q5T8U2 P62424 RPL7A 60S ribosomal protein L7a 0 68.355 0.044098 15924000 9056.8 22320 15747 24314 26225 25534 18995 17257 29692 17198 FALSE TRUE 9750.195571 21211.62126 16271.99712 22327.46842 25195.27473 26505.71426 16500.93368 19512.54915 32274.55649 16636.83067 0.586060877 1.274979693 0.97807073 1.342050591 1.514427551 1.593194929 0.991831558 1.172852543 1.939946203 1 14.022093 -4.503266393 1.031731493 1.358029925 8.62E-15 0.349191085 0.293271175 3.617968482 2.137391456 0.093365531 6.208258096 3.14E-05 4.503266393 -1.358029925 TPAAAAAMNLAS(ph)PR ddPTM_A459_MK2206_30min_R1 4 TPAAAAAMNLASPR 14 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR 207.21 6.97E-06 190085000 3864.36 3718.16 3423.45 2590.54 3577.47 3021.29 3478.93 2885.81 2845.17 2271.79 TRUE FALSE 3535.675889 3476.107108 3191.075752 2790.06384 3434.971794 3192.352829 3246.856927 2860.579667 3140.935603 2553.236496 1.384781979 1.361451285 1.249815972 1.092755741 1.345340238 1.250316151 1.271663213 1.120373953 1.230178093 1 11.31811146 -14.52287875 0.052342733 1.63E-09 1.731202728 0.560163157 0.078703645 414.7353128 1.595037483 56.58686353 11.75851901 3.00E-15 14.52287875 1.731202726 TPAAAAAMNLAS(ph)PR ddPTM_A459_MK2206_30min_R2 4 TPAAAAAMNLASPR 14 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR 140.68 0.00056051 156763000 60976 77852 74738.7 78795 77289 66013.3 82354.3 59271.3 61381.1 75168 TRUE FALSE 65644.36944 73985.98289 77230.45096 72357.19645 74254.24551 68525.48239 71541.08148 67018.26242 66719.91713 72715.27432 0.902759015 1.017475126 1.062093923 0.995075617 1.021164346 0.942380855 0.983852185 0.921653161 0.917550236 1 16.14997082 -6.767657884 24.99045259 0.950113409 1.003908265 0.211803824 0.044422637 217.7195915 874949.4569 0.015668884 0.014165681 1.71E-07 6.767657884 0.053794856 TPAAPAS(ph)PAAVPSEGSGGSTTGWR ddPTM_A459_MK2206_30min_R1 3 TPAAPASPAAVPSEGSGGSTTGWR 24 0 P07199 P07199 CENPB Major centromere autoantigen B 1 TPAAPAS(0.999)PAAVPSEGSGGSTTGWR;T(0.003)PAAPAS(0.997)PAAVPSEGSGGSTTGWR;T(0.003)PAAPAS(0.997)PAAVPSEGSGGSTTGWR 217.39 3.23E-34 169272000 11449.3 11782.2 11534.9 8701.2 11364.7 10133.3 11746.9 9795.7 9432.3 9586.3 TRUE FALSE 10475.47691 11015.17664 10751.94313 9371.367932 10912.01993 10707.03869 10963.28573 9710.057228 10412.82134 10773.92322 0.972299199 1.022392346 0.997959881 0.869819447 1.012817682 0.993791999 1.017576004 0.90125547 0.966483715 1 13.39525607 -5.567220197 24.99999523 0.964555931 1.000554731 0.087431036 0.046381329 295.479019 166591.6003 0.012737429 0.022061875 2.71E-06 5.567220197 0.0359988 TPAAPAS(ph)PAAVPSEGSGGSTTGWR ddPTM_A459_MK2206_30min_R2 6 TPAAPASPAAVPSEGSGGSTTGWR 24 0 P07199 P07199 CENPB Major centromere autoantigen B 1 TPAAPAS(1)PAAVPSEGSGGSTTGWR;TPAAPAS(0.992)PAAVPS(0.007)EGS(0.001)GGSTTGWR;T(0.011)PAAPAS(0.989)PAAVPSEGSGGSTTGWR;T(0.039)PAAPAS(0.961)PAAVPSEGSGGSTTGWR;T(0.005)PAAPAS(0.973)PAAVPS(0.014)EGS(0.008)GGSTTGWR;TPAAPAS(0.909)PAAVPS(0.088)EGS(0.003)GGSTTGWR 252.44 1.09E-52 363669100 212570 246499 221874 257417 242113 262427 259868 183122 211731 235412 TRUE FALSE 228844.5226 234258.2181 229271.1684 236385.2077 232606.4271 272413.8434 225747.0194 207056.6742 230146.9797 227730.5257 1.004891733 1.028664108 1.006765201 1.038004049 1.021410838 1.196211367 0.991290117 0.909217917 1.010611023 1 17.79696816 -7.508618327 24.99654646 0.96599947 1.048757814 0.272198109 0.057504601 836.1981477 1465747.691 0.025311744 0.016334277 3.10E-08 7.508618327 0.082758344 TPADRGPS(ph)PAPAPAASPQPGSR ddPTM_A459_MK2206_30min_R2 2 TPADRGPSPAPAPAASPQPGSR 22 1 Q8IX07 Q8IX07 ZFPM1 Zinc finger protein ZFPM1 1 TPADRGPS(1)PAPAPAASPQPGSR;T(0.004)PADRGPS(0.995)PAPAPAAS(0.001)PQPGSR 98.924 8.74E-05 21787000 7896.7 20917.5 14006.4 15377.3 18194.6 24327.9 19696.5 12044.8 9806.9 18447.4 TRUE FALSE 8501.277424 19878.76737 14473.36639 14120.9254 17480.18858 25253.71528 17110.32589 13619.09672 10659.88644 17845.46285 0.476383129 1.113939579 0.811039002 0.791289389 0.979531253 1.415133667 0.958805386 0.76316859 0.597344352 1 14.1232697 -6.265228191 23.87573866 0.963952877 0.821637988 0.084477483 0.241975896 559.4702908 3525580.167 0.078593206 0.092632056 5.43E-07 6.265228191 -0.142314889 TPADTGFAFPDWAYKPES(ph)SPGSR ddPTM_A459_MK2206_30min_R1 1 TPADTGFAFPDWAYKPESSPGSR 23 1 P50548 P50548 ERF ETS domain-containing transcription factor ERF 1 TPADTGFAFPDWAYKPES(0.465)S(0.465)PGS(0.07)R 107.36 1.06E-05 168380000 1480.1 1386.4 1673.4 1298 1490.8 1351.5 1457.2 1442 1531.5 1305.8 TRUE FALSE 1354.209723 1296.145108 1559.81427 1397.972185 1431.418279 1428.020762 1359.992847 1429.392746 1690.704906 1467.572362 0.922754991 0.883189914 1.062853397 0.95257462 0.975364702 0.973049642 0.926695597 0.973984509 1.152041936 1 10.51921593 -8.11686123 7.31223781 1.074936041 0.958516245 0.417546639 0.055645191 0.241994946 13.59997984 0.036891837 0.013800229 7.64E-09 8.11686123 -0.116419796 TPADTGFAFPDWAYKPESS(ph)PGSR ddPTM_A459_MK2206_30min_R2 1 TPADTGFAFPDWAYKPESSPGSR 23 1 P50548 P50548 ERF ETS domain-containing transcription factor ERF 1 TPADTGFAFPDWAY(0.001)KPES(0.458)S(0.491)PGS(0.051)R 99.722 2.85E-05 48360000 40048 47191 39013 53875 55819 43285 52390 51180 55295 49894 TRUE FALSE 43114.10567 44847.56356 40313.67395 49473.24016 53627.26559 44932.24101 45511.13007 57869.40173 60104.45915 48265.96287 0.893261071 0.929175777 0.83524023 1.025013016 1.111078334 0.93093017 0.942923903 1.198969176 1.24527629 1 15.55871854 -6.565095392 0.570109057 1.130885433 0.877569884 0.387686412 0.099917352 1.039821356 0.732044191 0.086565859 0.124952271 2.72E-07 6.565095392 -0.253315549 TPADTGFAFPDWAYKPESSPGS(ph)R ddPTM_A459_MK2206_30min_R1 1 TPADTGFAFPDWAYKPESSPGSR 23 1 P50548 P50548 ERF ETS domain-containing transcription factor ERF 1 TPADTGFAFPDWAYKPES(0.303)S(0.303)PGS(0.395)R 80.172 0.00032104 149430000 2719.3 2694.4 2772.2 2127.5 2373.7 2445.7 2493.7 2277.7 2608.8 2394.4 TRUE FALSE 2488.009255 2518.99407 2584.030788 2291.360419 2279.150503 2584.17342 2327.349823 2257.786309 2879.994096 2691.036349 0.92455431 0.936068393 0.9602363 0.851478807 0.846941552 0.960289303 0.864852615 0.839002532 1.070217464 1 11.39394616 -8.267866275 24.99993158 1.035108745 0.899004613 0.580717058 0.046618419 410.5411689 1596937.296 0.042673934 0.012097006 5.40E-09 8.267866275 -0.136104132 TPAPPEPGS(ph)PAPGEGPSGR ddPTM_A459_MK2206_30min_R1 3 TPAPPEPGSPAPGEGPSGR 19 0 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 TPAPPEPGS(1)PAPGEGPSGR;TPAPPEPGS(1)PAPGEGPSGR;TPAPPEPGS(0.998)PAPGEGPS(0.002)GR 188.54 2.64E-15 70039000 4246.12 3662.43 4041.81 2808.57 3579.73 3223.37 4649.25 3009.74 3666.69 3774.48 TRUE FALSE 3884.965197 3424.005141 3767.463198 3024.886548 3437.141774 3405.874424 4339.107016 2983.42616 4047.855547 4242.091078 0.915813717 0.807150313 0.888114642 0.71306497 0.810247048 0.802876308 1.022869838 0.703291397 0.954212315 1 12.05055988 TPAPPEPGS(ph)PAPGEGPSGR ddPTM_A459_MK2206_30min_R2 2 TPAPPEPGSPAPGEGPSGR 19 0 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 TPAPPEPGS(1)PAPGEGPSGR;T(0.014)PAPPEPGS(0.986)PAPGEGPSGR 178.1 7.06E-13 47479000 30668 32162 27469 32816 28602 28343 33696 20748 22360 29162 TRUE FALSE 33015.96566 30564.88185 28384.80275 30134.82783 27478.94177 29421.61273 29271.67472 23459.83484 24304.83238 28210.44633 1.170345385 1.083459705 1.006180562 1.068215209 0.974069727 1.042933259 1.037618277 0.831600981 0.861554337 1 14.78394187 -5.095598233 0.357445551 0.911733816 1.275877088 0.531549824 0.065489138 4.359817495 0.528228203 0.068101507 0.673690566 8.02E-06 5.095598233 0.364143272 TPAQFDADELR ddPTM_A459_MK2206_30min_R1 2 TPAQFDADELR 11 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 ; 144.7 0.010188 119515000 4184.6 3959.9 4001.5 3251.6 4146.4 3932.4 4185.6 3807.6 3338.7 3266.6 FALSE TRUE 3828.677796 3702.10979 3729.889329 3502.038795 3981.240108 4155.04909 3906.386261 3774.310555 3685.769813 3671.29107 1.042869585 1.008394518 1.015961213 0.953898432 1.084425079 1.13176782 1.064036108 1.028060833 1.003943774 1 11.84207178 -4.388784598 20.08642773 1.035319913 4.772108751 0.00078105 0.047488927 5032.824719 768621.7719 0.012621348 16965.65654 4.09E-05 4.388784598 3.736788839 TPAQFDADELR ddPTM_A459_MK2206_30min_R2 3 TPAQFDADELR 11 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 ;; 169.82 0.0055274 122246000 101729 119580 108102 128982 120466 108809 111571 101973 124886 96257 FALSE TRUE 109517.4505 113641.8311 111706.0667 118443.758 115735.8995 112949.8027 96921.59368 115301.2212 135748.3585 93116.14197 1.176138188 1.220431052 1.199642343 1.272000273 1.242919832 1.212999168 1.040867798 1.238251701 1.457839164 1 16.50674366 -11.05146627 7.106434731 0.999900031 1.223834727 0.332869514 0.097013509 0.000156588 1.04E-05 0.095724682 0.023206343 8.88E-12 11.05146627 0.223934696 TPAQYDASELK ddPTM_A459_MK2206_30min_R1 3 TPAQYDASELK 11 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;; 152.85 0.0079076 27754000 6841.7 6998.5 7272.4 7220.7 6725.3 6148.9 6742.6 7159.9 6523.9 6316.4 FALSE TRUE 6259.777488 6542.896378 6778.76975 7776.839565 6457.41706 6497.045404 6292.813457 7097.301749 7202.082751 7098.923318 0.881792521 0.921674469 0.954901109 1.095495643 0.909633302 0.915215606 0.88644618 0.999771575 1.014531701 1 12.79338451 -5.076276902 2.795341162 0.968998959 0.885762579 0.204980391 0.057809717 0.521521634 7.463819549 0.016362092 0.071692611 8.39E-06 5.076276902 -0.08323638 TPARPFGS(ph)VGR ddPTM_A459_MK2206_30min_R2 1 TPARPFGSVGR 11 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 T(0.004)PARPFGS(0.996)VGR 73.666 0.031387 10424000 19925 25165 24546 23076 20079 27173 29514 19131 22712 30112 TRUE FALSE 21450.47332 23915.34269 25364.35139 21190.61698 19290.59757 28207.08756 25638.77635 21631.48739 24687.44871 29129.44791 0.736384479 0.821002264 0.870746039 0.727463735 0.662236979 0.968335811 0.880166917 0.742598605 0.847508294 1 14.83019074 -6.765362599 24.99959487 0.87116213 0.770706258 0.34343899 0.08400135 154.8453128 986700.3661 0.030566482 0.02795697 1.72E-07 6.765362599 -0.100455872 TPAS(ph)PVVHIR ddPTM_A459_MK2206_30min_R2 1 TPASPVVHIR 10 0 P14866;M0QXS5;A0A3B3ITJ4;M0QYL7;M0R1W6 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 T(0.008)PAS(0.992)PVVHIR 80.469 0.034278 0 9504.6 9860 7046.6 9955.2 9899.5 9288.6 9920.7 9187.7 6955.1 9507.9 TRUE FALSE 10232.27948 9370.366738 7281.530127 9141.828315 9510.795889 9642.084182 8618.100173 10388.56394 7560.042026 9197.658002 1.112487492 1.018777469 0.791672198 0.993930011 1.034045394 1.048319494 0.936988543 1.129479258 0.821952939 1 13.16705084 -4.854019411 4.516193671 0.974912041 1.112467044 0.166494687 0.096234968 0.359732934 11.78964042 0.02362023 0.121366305 1.40E-05 4.854019411 0.137555003 TPASGLQT(ph)PTSTPAPGSATR ddPTM_A459_MK2206_30min_R2 1 TPASGLQTPTSTPAPGSATR 20 0 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 T(0.002)PAS(0.006)GLQT(0.943)PT(0.007)S(0.021)T(0.011)PAPGS(0.003)AT(0.006)R 87.496 0.0049513 5422200 6850.9 7263 7043.4 7377.1 7525.5 8520.4 7010.3 6118.6 6234.9 7356.1 TRUE FALSE 7375.410171 6902.329981 7278.223441 6774.367332 7230.011057 8844.649793 6089.839189 6918.322028 6777.200332 7116.071059 1.036444143 0.969963611 1.022786785 0.951981406 1.016011644 1.242911955 0.855786731 0.972210925 0.952379519 1 12.7968652 TPASKS(ph)PSEGQTATTSPR ddPTM_A459_MK2206_30min_R1 2 TPASKSPSEGQTATTSPR 18 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 TPAS(0.001)KS(0.658)PS(0.335)EGQT(0.004)AT(0.001)TSPR;T(0.002)PAS(0.194)KS(0.754)PS(0.051)EGQTATTSPR 127.91 0.0033459 4431300 1066.16 1396.8 1248.95 1218.73 876.14 903.81 1121.21 1067.2 1242.65 994.63 TRUE FALSE 975.4774934 1305.868066 1164.174754 1312.596796 841.2414885 954.9829411 1046.416127 1057.869583 1371.827914 1117.852273 0.872635425 1.168193774 1.041438821 1.174213111 0.752551575 0.85430156 0.936095181 0.946341129 1.227199646 1 10.12651383 -6.231512836 24.96517095 0.944310165 1.069933973 0.134254112 0.137237093 1339.822198 1117699.605 0.04106112 0.053001315 5.87E-07 6.231512836 0.125623809 TPAST(ph)PVSGTPQASPMIER ddPTM_A459_MK2206_30min_R2 1 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 TPAS(0.339)T(0.558)PVS(0.053)GT(0.037)PQAS(0.013)PMIER 201.18 3.98E-15 71405000 7965.1 12983 9728.4 12001 9095.6 8069.9 9716.8 8719.9 9519.7 9809.6 TRUE FALSE 8574.91418 12338.2831 10052.74 11020.47991 8738.461042 8377.005699 8440.972488 9859.62087 10347.7063 9489.513555 0.903619994 1.300201852 1.05935251 1.161332438 0.920854477 0.882764501 0.889505288 1.039001716 1.090435905 1 13.21211842 -6.26180135 24.99999523 0.963947856 1.116648198 0.26399755 0.110124467 41.49129576 2865616.708 0.033193535 0.040006644 5.47E-07 6.26180135 0.152700342 TPASTPVS(ph)GTPQASPMIER ddPTM_A459_MK2206_30min_R2 1 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 TPAS(0.001)T(0.017)PVS(0.593)GT(0.017)PQAS(0.372)PMIER 161.2 1.48E-06 71923000 15759 20988 20758 24255 17516 21111 22308 15395 21607 17066 TRUE FALSE 16965.52116 19945.76644 21450.06136 22273.28891 16828.23383 21914.3939 19378.9328 17407.17936 23486.3378 16509.13782 1.027644287 1.208165239 1.299284166 1.349149129 1.019328448 1.327409956 1.1738307 1.054396635 1.422626552 1 14.01097716 -10.25205481 6.27232761 0.999999999 1.208149106 0.178167016 0.134708254 3.99E-09 5.94E-10 0.124930176 0.030300018 5.60E-11 10.25205481 0.208149107 TPASTPVSGT(ph)PQAS(ph)PMIER ddPTM_A459_MK2206_30min_R2 4 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 2 T(0.001)PAST(0.001)PVS(0.057)GT(0.94)PQAS(1)PMIER;TPASTPVS(0.196)GT(0.806)PQAS(0.997)PMIER;T(0.009)PAS(0.001)T(0.002)PVS(0.314)GT(0.678)PQAS(0.996)PMIER;TPASTPVS(0.335)GT(0.665)PQAS(1)PMIER 158.02 6.23E-05 28506000 76501 89554 74274 91312 85081 81843 78181 71826 75325 89728 TRUE FALSE 82357.97538 85106.87858 76750.25809 83851.51751 81740.29244 84957.59272 67915.74079 81213.90482 81876.63234 86800.18271 0.948822604 0.980491929 0.884217702 0.966029274 0.941706456 0.978772049 0.782437763 0.935642095 0.943277189 1 16.40541046 TPASTPVSGT(ph)PQASPMIER ddPTM_A459_MK2206_30min_R1 2 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 TPAS(0.001)T(0.004)PVS(0.157)GT(0.83)PQAS(0.008)PMIER;TPAST(0.001)PVS(0.116)GT(0.518)PQAS(0.364)PMIER 127.49 0.0035381 23983000 1892.41 2059.2 1858.66 1949.41 2215.6 2257.21 2539.24 1997.19 2018.87 1634.84 TRUE FALSE 1731.450592 1925.145706 1732.499338 2099.553896 2127.34796 2385.01128 2369.851933 1979.728778 2228.738761 1837.376322 0.942349464 1.047768866 0.942920248 1.142691277 1.157818317 1.298052691 1.289802151 1.07747594 1.213000698 1 10.84343143 -5.874801859 4.404947334 1.185790646 0.98510196 0.487996561 0.088997081 0.175910172 5.925690949 0.025386583 0.038981575 1.33E-06 5.874801859 -0.200688686 TPASTPVSGT(ph)PQASPMIER ddPTM_A459_MK2206_30min_R2 6 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 TPASTPVS(0.009)GT(0.964)PQAS(0.027)PMIER;TPASTPVS(0.022)GT(0.976)PQAS(0.002)PMIER;TPASTPVS(0.391)GT(0.573)PQAS(0.035)PMIER;TPAST(0.001)PVS(0.014)GT(0.984)PQAS(0.002)PMIER;TPAS(0.005)T(0.023)PVS(0.072)GT(0.671)PQAS(0.229)PMIER;TPASTPVS(0.085)GT(0.914)PQAS(0.001)PMIER 193.72 3.26E-14 128868600 70798.2 94417 85086.6 93501 78676.8 93542 92918 79052.8 93203 82817.8 TRUE FALSE 76218.56463 89728.38908 87923.34478 85861.66921 75587.55351 97101.80636 80717.75499 89385.27239 101309.6285 80115.46197 0.951358986 1.119988413 1.097457877 1.071724073 0.943482714 1.212023297 1.007517812 1.115705635 1.26454527 1 16.28979308 -6.766872374 24.99999578 1.120162443 1.046733701 0.165380184 0.092061585 289.1365072 1330454.995 0.031507183 0.028583307 1.71E-07 6.766872374 -0.073428742 TPASTPVSGTPQAS(ph)PMIER ddPTM_A459_MK2206_30min_R1 4 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 TPASTPVS(0.306)GT(0.062)PQAS(0.632)PMIER;TPASTPVS(0.009)GT(0.044)PQAS(0.947)PMIER;TPASTPVS(0.002)GT(0.05)PQAS(0.948)PMIER;TPASTPVS(0.025)GT(0.015)PQAS(0.959)PMIER 179.84 5.42E-13 106220000 4635.09 5665.3 4785.29 4014.05 4408 5155.94 5261.8 4348.75 5963.5 5559.6 TRUE FALSE 4240.851256 5296.48794 4460.477847 4323.212827 4232.420026 5447.864867 4910.794923 4310.729337 6583.427166 6248.365221 0.678713728 0.847659788 0.713863177 0.691895028 0.677364379 0.871886433 0.78593276 0.689897147 1.053623937 1 12.60926307 -8.265450967 24.99433643 1.026812011 0.748674627 0.735872161 0.067583568 183.1938083 1141370.729 0.058284922 0.017205667 5.43E-09 8.265450967 -0.278137384 TPASTPVSGTPQAS(ph)PMIER ddPTM_A459_MK2206_30min_R2 3 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 TPASTPVSGT(0.006)PQAS(0.994)PMIER;TPASTPVSGTPQAS(1)PMIER;TPASTPVSGTPQAS(1)PMIER 248.23 1.45E-37 44947200 65705 97123 79682 102993 77322 85796 93977 80508 82522 82487 TRUE FALSE 70735.42532 92300.01305 82338.55811 94578.14244 74285.94977 89061.0269 81637.70701 91030.67203 89699.61439 79795.45595 0.886459316 1.156707634 1.031870263 1.185257247 0.930954638 1.116116524 1.023087168 1.140800199 1.124119329 1 16.28401897 -7.75340065 24.96974406 1.099344826 1.054317877 0.03095431 0.094087097 604.9588276 1879128.211 0.042286606 0.023851209 1.76E-08 7.75340065 -0.04502695 TPAT(ph)TPEAR ddPTM_A459_MK2206_30min_R2 1 TPATTPEAR 9 0 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 T(0.086)PAT(0.77)T(0.144)PEAR 115.7 0.018905 3333700 27795 33641 26825 29946 33412 43701 42864 33391 43232 44843 TRUE FALSE 29923.00657 31970.43686 27719.33211 27499.31601 32100.077 45364.07218 37235.90531 37755.31835 46992.24121 43379.77658 0.689791625 0.736989431 0.638992044 0.633920185 0.739977924 1.045742412 0.85837015 0.870343771 1.083275317 1 15.404735 -6.634925839 5.332364258 0.955345661 0.678106949 0.799258587 0.071317446 0.097441021 4.185714438 0.024112715 0.024039427 2.32E-07 6.634925839 -0.277238712 TPDS(ph)PPTPAPLLLDLGIPVGQR ddPTM_A459_MK2206_30min_R2 1 TPDSPPTPAPLLLDLGIPVGQR 22 0 Q16584;Q16584-2;E9PID4 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 T(0.153)PDS(0.545)PPT(0.302)PAPLLLDLGIPVGQR 80.541 0.0011618 3902900 13296 18190 16780 21068 18407 16775 21764 17548 19036 15796 TRUE FALSE 14313.95198 17286.71105 17339.43683 19346.67701 17684.24869 17413.38438 18906.36066 19841.58385 20691.71687 15280.57781 0.936741539 1.131286478 1.134736987 1.266095906 1.157302355 1.139576303 1.23728048 1.298483872 1.354118746 1 13.89941148 -3.915507469 0.886309202 1.218382441 2.87E-16 0.412315136 0.094236601 8.366220725 1.660841121 0.031775586 14.23902914 0.000121477 3.915507469 -1.218382441 TPDT(ph)PNNDPR ddPTM_A459_MK2206_30min_R1 1 TPDTPNNDPR 10 0 Q16513-3;Q16513-2;Q16513;B1AL79 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 T(0.112)PDT(0.888)PNNDPR 116.03 0.015117 2743800 3162.7 3490.7 3191.9 2637.2 3171 2601.4 2727 2733.4 1964.9 2347.9 TRUE FALSE 2893.695757 3263.454796 2975.242721 2840.317601 3044.692355 2748.68902 2545.086806 2709.502172 2169.158386 2638.775578 1.096605479 1.236730711 1.127508814 1.076377099 1.1538277 1.041653198 0.964495362 1.026802808 0.822032159 1 11.36565294 -7.085540444 1.031837729 0.931817829 1.1511933 0.648875347 0.064012757 0.317796901 0.684947854 0.040850016 0.027094769 8.21E-08 7.085540444 0.219375471 TPDVFSSS(ph)PLHLQPPPLGK ddPTM_A459_MK2206_30min_R2 1 TPDVFSSSPLHLQPPPLGK 19 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 T(0.223)PDVFS(0.232)S(0.232)S(0.313)PLHLQPPPLGK 54.008 0.041338 5038600 28647 26838 24979 28519 23794 31498 30198 19347 25331 21799 TRUE FALSE 30840.23635 25505.26395 25811.78739 26188.90647 22859.728 32696.67846 26232.96633 21875.71933 27534.24459 21087.70042 1.46247508 1.209485313 1.224020964 1.241904331 1.084031334 1.550509435 1.243993693 1.037368651 1.30570162 1 14.36411416 -14.52287874 0.15830067 0.040230053 1.32625715 0.251663461 0.143260425 202.1278386 1.842632311 60.64326011 0.631057074 3.00E-15 14.52287874 1.286027097 TPEAS(ph)PEPK ddPTM_A459_MK2206_30min_R2 1 TPEASPEPK 9 0 A0A087WW66;Q99460-2;Q99460 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 1 T(0.076)PEAS(0.924)PEPK 97.734 0.020328 5380300 50549 64514 77161 70806 72356 59747 91892 81784 73257 90150 TRUE FALSE 54419.07031 61310.32857 79733.50923 65020.9233 69514.93988 62020.71395 79826.47002 92473.44961 79628.76144 87208.41288 0.624011704 0.703032271 0.914286897 0.745580858 0.797112774 0.711178107 0.915352859 1.060373037 0.913085777 1 16.4121797 -7.425032256 4.191465134 0.990428894 0.757318579 0.668789062 0.077946422 0.146248864 4.466165337 0.035696403 0.022935921 3.76E-08 7.425032256 -0.233110315 TPEDGDYS(ph)YEIIEK ddPTM_A459_MK2206_30min_R1 4 TPEDGDYSYEIIEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPEDGDYS(1)YEIIEK;T(0.483)PEDGDYS(0.516)YEIIEK;TPEDGDYS(1)YEIIEK;T(0.001)PEDGDYS(0.999)YEIIEK 192.4 9.16E-05 42608300 5639.63 5676.13 5177.96 4549.97 5255.05 4941.54 4930.74 5476.55 4472.27 4119.85 TRUE FALSE 5159.949854 5306.612905 4826.494502 4900.409478 5045.730231 5221.325724 4601.819331 5428.669101 4937.178471 4630.248121 1.114400291 1.146075279 1.042383556 1.058347058 1.089732148 1.127655708 0.993860202 1.172435895 1.0662881 1 12.17687379 TPEDGDYS(ph)YEIIEK ddPTM_A459_MK2206_30min_R2 1 TPEDGDYSYEIIEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.479)PEDGDYS(0.521)YEIIEK 117.08 0.0033143 0 7078.6 6376.4 8214 10330 9154.2 6846.2 9286.3 7500.1 6586.1 7112.6 TRUE FALSE 7620.543059 6059.757248 8487.85066 9486.005956 8794.760112 7106.736938 8066.997655 8480.388822 7158.947073 6880.516444 1.107553934 0.880712559 1.233606624 1.378676446 1.278212207 1.032878418 1.17244072 1.232522136 1.040466531 1 12.74830114 -10.53245042 14.68897135 0.999999998 1.155301701 0.099639558 0.135368126 0 0 0.140645034 0.034111431 2.93E-11 10.53245042 0.155301703 TPEDGDYSYEIIEK ddPTM_A459_MK2206_30min_R1 1 TPEDGDYSYEIIEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 140.24 0.0060535 0 339.03 325.41 292.76 342.61 432.63 421.02 382.09 251.51 263.09 221.67 FALSE TRUE 310.1937182 304.2257499 272.8882669 368.9978816 415.397431 444.8577886 356.6014733 249.3110746 290.439147 249.1321531 1.245097087 1.221142057 1.095355471 1.481133113 1.667377839 1.785629767 1.431374749 1.000718179 1.165803544 1 7.960767418 -7.756144724 24.97040469 1.062445614 1.424306523 0.412413131 0.198219733 145.2711202 685130.8111 0.112590789 0.062536556 1.75E-08 7.756144724 0.361860909 TPEEIRR ddPTM_A459_MK2206_30min_R1 2 TPEEIRR 7 1 P09525;Q6P452;P09525-2;B4E1S2 P09525 ANXA4 Annexin A4;Annexin 0 ; 96.492 0.031269 51786000 5245.7 5694.4 5533.5 5188.2 4611.6 4602.7 5787.7 5852.5 1001.4 3598 FALSE TRUE 4799.525669 5323.693525 5157.901437 5587.796063 4427.910207 4863.300896 5401.613093 5801.33221 1105.499114 4043.747404 1.186900464 1.316524746 1.275525131 1.381836081 1.095001682 1.202671782 1.335793895 1.43464258 0.273384809 1 11.98147717 -8.249891077 24.9973689 0.636692377 1.276468091 0.652158206 0.187517965 356.6732887 772056.4945 0.119349166 0.044265151 5.62E-09 8.249891077 0.639775714 TPEEIRR ddPTM_A459_MK2206_30min_R2 1 TPEEIRR 7 1 P09525;Q6P452;P09525-2;B4E1S2 P09525 ANXA4 Annexin A4;Annexin 0 86.953 0.046309 30980000 6394 10561 10464 12852 9006.4 9980.4 10463 9350.9 9498.6 8019.9 FALSE TRUE 6883.529556 10036.5561 10812.86454 11801.95049 8652.763482 10360.21112 9089.195532 10573.09474 10324.77106 7758.21132 0.887257291 1.293668822 1.393731634 1.52122055 1.115303918 1.335386559 1.171558128 1.36282634 1.330818488 1 12.92150836 -11.16788987 8.109001128 0.99963324 1.277323857 0.18761888 0.166263625 0.001096613 4.80E-05 0.16013542 0.038789069 6.79E-12 11.16788987 0.277690617 TPEELDDS(ph)DFETEDFDVR ddPTM_A459_MK2206_30min_R1 7 TPEELDDSDFETEDFDVR 18 0 G3XAM7;P35221-3;P35221;P35221-2 G3XAM7 CTNNA1 Catenin alpha-1 1 TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(0.998)DFET(0.002)EDFDVR;TPEELDDS(0.989)DFET(0.011)EDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR 331.4 2.91E-144 294272700 7012.62 7416.99 7365.92 6596.46 7505.22 7714.37 8616.06 7288.69 6144.34 6715.72 TRUE FALSE 6416.159844 6934.142603 6865.941873 7104.520492 7206.271195 8151.150963 8041.298358 7224.965752 6783.066131 7547.714095 0.850079874 0.91870764 0.909671695 0.941281082 0.954762078 1.079949619 1.065395199 0.957238928 0.898691451 1 12.88182406 -6.043457197 1.637721955 1.000274636 0.890545677 0.440939411 0.051533003 0.391809532 2.11056982 0.019433059 0.031527441 9.05E-07 6.043457197 -0.109728959 TPEELDDS(ph)DFETEDFDVR ddPTM_A459_MK2206_30min_R2 1 TPEELDDSDFETEDFDVR 18 0 G3XAM7;P35221-3;P35221;P35221-2 G3XAM7 CTNNA1 Catenin alpha-1 1 TPEELDDS(0.999)DFET(0.001)EDFDVR 105.02 0.0017611 4874800 6590.2 3156.7 9161.8 6658.3 5819 6370.9 5398.6 5929.9 3500.6 6988.4 TRUE FALSE 7094.750779 2999.942868 9467.249839 6114.295591 5590.516822 6613.349064 4689.757335 6704.95829 3805.07586 6760.36908 1.049462048 0.443754303 1.400404287 0.904432216 0.82695438 0.978252664 0.69371321 0.991803585 0.562850314 1 12.7228863 -7.238087107 24.26489645 0.811408693 0.926605672 0.053060914 0.250909591 1973.337579 2050458.943 0.092588362 0.071667859 5.78E-08 7.238087107 0.11519698 TPEELDDSDFET(ph)EDFDVR ddPTM_A459_MK2206_30min_R1 1 TPEELDDSDFETEDFDVR 18 0 G3XAM7;P35221-3;P35221;P35221-2 G3XAM7 CTNNA1 Catenin alpha-1 1 TPEELDDS(0.361)DFET(0.639)EDFDVR 118.45 0.0026518 0 146.63 398.34 234.68 253.05 379.57 251.33 152.93 283.27 183.99 277.01 TRUE FALSE 134.1583485 372.4079936 218.7505755 272.5399548 364.4509231 265.5600874 142.7283187 280.7934003 203.1164189 311.3280901 0.430922724 1.196191431 0.702636808 0.875410744 1.170632958 0.852991091 0.458449858 0.901921186 0.652419185 1 8.282291942 -7.017859256 24.95009034 0.732266631 0.896262353 0.047503312 0.245258712 1856.769243 2593975.755 0.08775568 0.069435624 9.60E-08 7.017859256 0.163995723 TPEQYYQTFS(ph)PSSSHSPAR ddPTM_A459_MK2206_30min_R2 1 TPEQYYQTFSPSSSHSPAR 19 0 Q7Z5J4-3;Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2;A8MXE8;Q7Z5J4-4 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 TPEQYYQT(0.225)FS(0.59)PS(0.087)S(0.087)S(0.009)HS(0.002)PAR 79.94 0.0043773 4436800 8329.6 18971 11187 23919 16809 23181 21596 13956 15941 17545 TRUE FALSE 8967.32058 18028.92773 11559.969 21964.74119 16148.9942 24063.1692 18760.41926 15780.09712 17327.51937 16972.50809 0.528343868 1.062242989 0.681099631 1.29413644 0.951479541 1.417773324 1.105341601 0.929744563 1.020916842 1 14.05091215 -4.415564022 0.954976926 1.091229232 1.52E-12 0.384612189 0.193414909 4.008051852 1.811218103 0.063005505 5.334581598 3.84E-05 4.415564022 -1.091229232 TPESFLGPNAALVDLDSLVSRPGPTPPGAK ddPTM_A459_MK2206_30min_R1 1 TPESFLGPNAALVDLDSLVSRPGPTPPGAK 30 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 0 96.312 2.51E-07 5641800 1300.8 1320.8 950.08 761.42 953.84 940.86 1287.4 1290 994.86 1196.6 FALSE TRUE 1190.160129 1234.81568 885.5912167 820.0647003 915.846533 994.1306801 1201.519895 1278.721666 1098.279257 1344.843842 0.884980168 0.918185176 0.658508586 0.609784329 0.681005857 0.739216442 0.893427071 0.950832823 0.81665932 1 10.39322295 -7.292145767 5.047539536 0.913353125 0.742475612 0.404617219 0.099017039 0.231625607 16.16191804 0.046586119 0.031914928 5.10E-08 7.292145767 -0.170877513 TPESQPDT(ph)PPGTPLVSQDEK ddPTM_A459_MK2206_30min_R2 2 TPESQPDTPPGTPLVSQDEK 20 0 M0R3C8;A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;A0A0D9SFL2;M0QYH2;Q96T60-2;Q96T60 M0R3C8 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase 1 TPES(0.001)QPDT(0.999)PPGTPLVSQDEK;T(0.002)PES(0.007)QPDT(0.991)PPGTPLVSQDEK 134.34 0.0001658 10547900 164049 131778 138761 149874 122773 114092 163208 132109 103874 165092 TRUE FALSE 176608.7176 125234.0961 143387.2225 137628.8148 117952.3151 118433.851 141778.5936 149376.0999 112908.7728 159705.0616 1.105842957 0.784158592 0.89782516 0.861768647 0.738563412 0.741578569 0.887752662 0.93532477 0.706983058 1 17.28505051 -4.75481231 24.9857696 0.835146178 1.105843418 0.438292183 0.090402463 208.2957034 785256.8981 0.021872778 0.205635292 1.76E-05 4.75481231 0.27069724 TPESQPDT(ph)PPGTPLVSQDEKR ddPTM_A459_MK2206_30min_R1 4 TPESQPDTPPGTPLVSQDEKR 21 1 M0R3C8;A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;A0A0D9SFL2;M0QYH2;Q96T60-2;Q96T60 M0R3C8 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase 1 T(0.002)PES(0.055)QPDT(0.943)PPGTPLVSQDEKR;TPES(0.001)QPDT(0.999)PPGTPLVSQDEKR;TPES(0.001)QPDT(0.997)PPGT(0.002)PLVSQDEKR;TPES(0.001)QPDT(0.999)PPGTPLVSQDEKR 181.65 2.54E-14 231104000 11859.8 12697 12392.5 9602.3 11429.3 10691.4 11296 11185.8 10329.9 8774.51 TRUE FALSE 10851.06173 11870.42299 11551.33163 10341.87081 10974.04678 11296.73783 10542.46445 11088.00373 11403.73007 9861.562543 1.100338986 1.2037061 1.171349021 1.048705088 1.112810138 1.14553224 1.069046047 1.124365807 1.156381661 1 13.26760054 -14.52287875 0.266627351 0.170868382 1.134581084 0.40962525 0.044602085 217.6725703 2.120147951 99.40538274 0.058822488 3.00E-15 14.52287875 0.963712701 TPESQPDT(ph)PPGTPLVSQDEKR ddPTM_A459_MK2206_30min_R2 4 TPESQPDTPPGTPLVSQDEKR 21 1 M0R3C8;A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;A0A0D9SFL2;M0QYH2;Q96T60-2;Q96T60 M0R3C8 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase 1 TPESQPDT(1)PPGTPLVSQDEKR;T(0.005)PES(0.231)QPDT(0.763)PPGTPLVSQDEKR;TPES(0.013)QPDT(0.961)PPGT(0.025)PLVSQDEKR;TPES(0.001)QPDT(0.999)PPGTPLVSQDEKR 166.21 4.77E-10 494120000 773056 1002825 1011682 954663 917591 894993 1083370 750832 885608 961834 TRUE FALSE 832241.7617 953026.1687 1045410.973 876663.9791 881561.7668 929052.5858 941122.2176 848968.3204 962636.583 930449.4354 0.894451359 1.024264331 1.123554847 0.942194112 0.947458006 0.998498737 1.011470567 0.912428218 1.034593119 1 19.82756822 TPETLLPFAEAEAFLKK ddPTM_A459_MK2206_30min_R1 1 TPETLLPFAEAEAFLKK 17 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 0 110.04 0.0029396 1036200 373.95 448.76 376.11 253.35 382.22 337.6 402.16 287.06 373.36 292.76 FALSE TRUE 342.1435888 419.5456424 350.5807011 272.8630609 366.995368 356.7146203 375.3326402 284.5502647 412.1721081 329.029319 1.03985745 1.275101087 1.065499884 0.829297102 1.115388042 1.084142353 1.140727037 0.864817353 1.252691126 1 8.362072335 -5.501377152 24.33064286 1.036963888 1.160684612 0.111257535 0.129420931 1047.568981 1185398.923 0.032533539 0.066623584 3.15E-06 5.501377152 0.123720724 TPFNTDLGENS(ph)GIGK ddPTM_A459_MK2206_30min_R2 2 TPFNTDLGENSGIGK 15 0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 TPFNTDLGENS(1)GIGK;TPFNT(0.13)DLGENS(0.869)GIGK 177.04 1.94E-05 5821100 25960 33216 27249 34872 32988 35094 35242 29956 22137 26097 TRUE FALSE 27947.51756 31566.54174 28157.46806 32022.84605 31692.72537 36429.52676 30614.68307 33871.35205 24062.43625 25245.45703 1.107031555 1.250385038 1.115347923 1.268459748 1.255383309 1.443013162 1.212680881 1.34168108 0.953139261 1 14.62373617 -8.270149449 24.98979705 0.976569574 1.250907272 0.577249017 0.093332068 504.9941207 1448845.529 0.086579041 0.023756931 5.37E-09 8.270149449 0.274337698 TPGDFSYAYQKPEET(ph)TRSPDEEDYDYESYEK ddPTM_A459_MK2206_30min_R1 6 TPGDFSYAYQKPEETTRSPDEEDYDYESYEK 31 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.003)PGDFS(0.013)Y(0.06)AY(0.284)QKPEET(0.399)T(0.12)RS(0.12)PDEEDYDYESYEK;TPGDFS(0.001)Y(0.004)AY(0.013)QKPEET(0.653)T(0.164)RS(0.164)PDEEDYDYESYEK;T(0.003)PGDFS(0.008)Y(0.025)AY(0.156)QKPEET(0.512)T(0.148)RS(0.148)PDEEDYDYESYEK;T(0.001)PGDFS(0.005)Y(0.037)AY(0.103)QKPEET(0.503)T(0.145)RS(0.205)PDEEDYDYESYEK;T(0.001)PGDFS(0.002)Y(0.013)AY(0.033)QKPEET(0.647)T(0.152)RS(0.152)PDEEDY(0.001)DYESYEK;T(0.001)PGDFS(0.003)Y(0.014)AY(0.038)QKPEET(0.606)T(0.169)RS(0.169)PDEEDY(0.001)DYESYEK 79.407 2.31E-05 692074000 16383.8 16886.7 18604.3 16028 16396.5 13270.1 15109.4 15945.5 14172.1 14097 TRUE FALSE 14990.27178 15787.37276 17341.49195 17262.47934 15743.39268 14021.44159 14101.47949 15806.09017 15645.34051 15843.44279 0.946149898 0.996460995 1.09455326 1.089566174 0.993685078 0.884999667 0.890051467 0.997642393 0.987496261 1 13.95159825 -6.525140588 24.86166041 0.947052656 1.034653534 0.317793438 0.054765934 81.5658455 896534.759 0.019578255 0.019693832 2.98E-07 6.525140588 0.087600879 TPGDFSYAYQKPEET(ph)TRSPDEEDYDYESYEK ddPTM_A459_MK2206_30min_R2 4 TPGDFSYAYQKPEETTRSPDEEDYDYESYEK 31 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.004)PGDFS(0.011)Y(0.032)AY(0.053)QKPEET(0.646)T(0.216)RS(0.035)PDEEDY(0.001)DYESYEK;T(0.006)PGDFS(0.026)Y(0.122)AY(0.112)QKPEET(0.547)T(0.094)RS(0.094)PDEEDYDYESYEK;T(0.014)PGDFS(0.024)Y(0.094)AY(0.088)QKPEET(0.528)T(0.107)RS(0.107)PDEEDY(0.033)DY(0.002)ES(0.002)YEK;T(0.001)PGDFS(0.006)Y(0.042)AY(0.132)QKPEET(0.512)T(0.153)RS(0.153)PDEEDYDYESYEK 66.879 0.00042048 382402000 181315 207840 218536 229463 234239 182895 252190 184209 205910 235788 TRUE FALSE 195196.6158 197518.9678 225821.8812 210715.1389 225041.5999 189855.1974 219077.1501 208285.7488 223819.6796 228094.2569 0.855771726 0.865953271 0.990037558 0.923807297 0.986616686 0.832354133 0.960467629 0.91315648 0.981259601 1 17.7992706 -1.522878746 0.046022959 1.151731376 0.538194102 0.271431132 0.050299015 897.5881101 3.14159496 10.48929168 40.44249717 0.03 1.522878746 -0.613537274 TPGHPPPPEIPS(ph)ELGACDFEKPESPR ddPTM_A459_MK2206_30min_R1 1 TPGHPPPPEIPSELGACDFEKPESPR 26 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 TPGHPPPPEIPS(0.98)ELGACDFEKPES(0.02)PR 59.537 0.0028036 9997700 1888.8 1819.9 1625.9 1377.8 1272.8 1209 1628.4 1430.7 1578.2 1530.9 TRUE FALSE 1728.147642 1701.424179 1515.538438 1483.918395 1222.101681 1277.452535 1519.772407 1418.191541 1742.259538 1720.55945 1.004410305 0.98887846 0.880840495 0.862462727 0.710293202 0.742463468 0.883301305 0.824261865 1.012612228 1 10.74866203 -5.319418648 2.493063137 0.845023278 1.005853759 0.240791789 0.091078109 0.383484744 4.551407254 0.025773228 0.07761617 4.79E-06 5.319418648 0.160830481 TPGHPPPPEIPS(ph)ELGACDFEKPESPR ddPTM_A459_MK2206_30min_R2 1 TPGHPPPPEIPSELGACDFEKPESPR 26 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 TPGHPPPPEIPS(0.721)ELGACDFEKPES(0.278)PR 45.784 0.025014 6377700 45004 44830 47056 37920 35473 28556 46276 31500 28632 45339 TRUE FALSE 48449.54084 42603.80739 48624.82355 34821.8147 34080.15178 29642.71859 40199.90561 35617.15816 31122.35961 43859.59214 1.104650966 0.97136807 1.108647417 0.793938407 0.77702847 0.675854862 0.916559039 0.812072261 0.709590721 1 15.42060478 -5.768242287 24.99589292 0.80152688 1.052536754 0.589906589 0.094916454 100.5737282 369538.9195 0.025567594 0.038898293 1.71E-06 5.768242287 0.251009875 TPGHQNSVQPGAAS(ph)PSNPCPATR ddPTM_A459_MK2206_30min_R1 1 TPGHQNSVQPGAASPSNPCPATR 23 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 TPGHQNSVQPGAAS(0.608)PS(0.383)NPCPAT(0.01)R 127.16 6.16E-06 3189000 680.97 605.59 406.4 481.65 682.71 769.69 593.22 627.4 270.5 513.29 TRUE FALSE 623.0499256 566.1659809 378.8147003 518.7467665 655.516215 813.2691826 553.6473762 621.9147079 298.619443 576.8802403 1.080033397 0.981427238 0.656660904 0.89922783 1.136312477 1.409771259 0.959726712 1.07806554 0.51764547 1 9.172128038 -8.231082654 24.97747757 0.758822502 1.021560099 0.204759895 0.209850334 998.6951566 821727.6029 0.15012083 0.056725802 5.87E-09 8.231082654 0.262737597 TPGHQNSVQPGAAS(ph)PSNPCPATR ddPTM_A459_MK2206_30min_R2 2 TPGHQNSVQPGAASPSNPCPATR 23 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 TPGHQNSVQPGAAS(0.758)PS(0.242)NPCPATR;TPGHQNSVQPGAAS(0.897)PS(0.102)NPCPATR 140.59 1.77E-06 6556400 8213.7 12577.7 10376.6 17121.9 15947 15301.4 12846.9 7761.9 14999.6 10724.1 TRUE FALSE 8842.547187 11953.10971 10722.55066 15722.986 15320.84065 15883.7055 11160.0866 8776.406981 16304.23809 10374.1735 0.852361607 1.152198748 1.033581198 1.515589267 1.476825181 1.531081537 1.075756696 0.845986139 1.571618028 1 13.34070878 -5.655610719 11.47085538 1.290774841 1.025102101 0.210309138 0.244213641 0.702044356 71.4163208 0.069239332 0.119951701 2.21E-06 5.655610719 -0.26567274 TPGNQTPVMPS(ph)ASPILHSQGK ddPTM_A459_MK2206_30min_R2 1 TPGNQTPVMPSASPILHSQGK 21 0 Q9UIF8-4;Q9UIF8-2;Q9UIF8-5;Q9UIF8-3;Q9UIF8;A0A0A0MR97 Q9UIF8-4 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B 1 TPGNQT(0.001)PVMPS(0.62)AS(0.375)PILHS(0.003)QGK 63.138 0.041297 0 15032 21380 17147 27017 23250 24929 21229 21309 17982 16743 TRUE FALSE 16182.86148 20318.30029 17718.67242 24809.62468 22337.08818 25877.69056 18441.6068 24094.15946 19546.04186 16196.67728 0.999146998 1.254473367 1.093969591 1.531772489 1.379115469 1.597716008 1.138604325 1.48759891 1.206793314 1 13.98341026 -5.737665733 24.99394874 1.35949321 1.129724195 0.21998138 0.183973402 318.6192129 334971.2857 0.046854269 0.081098554 1.83E-06 5.737665733 -0.229769015 TPGNQTPVMPSAS(ph)PILHSQGK ddPTM_A459_MK2206_30min_R2 1 TPGNQTPVMPSASPILHSQGK 21 0 Q9UIF8-4;Q9UIF8-2;Q9UIF8-5;Q9UIF8-3;Q9UIF8;A0A0A0MR97 Q9UIF8-4 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B 1 TPGNQTPVMPS(0.181)AS(0.819)PILHSQGK 81.315 0.0062756 0 15052 19052 15380 23244 24765 22322 20340 17570 15819 18792 TRUE FALSE 16204.39269 18105.90538 15892.76152 21344.89085 23792.60167 23171.47935 17669.33357 19866.45933 17194.90803 18178.81858 0.891388658 0.995989113 0.874246115 1.174162708 1.308809017 1.274641652 0.971973701 1.092835557 0.94587599 1 14.14997082 -5.761925089 24.99999998 1.123048167 0.928086058 0.346372554 0.11799314 15.18838675 781837.0966 0.035459768 0.056434824 1.73E-06 5.761925089 -0.194962108 TPGVLLPGAGGAAGFGMTSPPPPT(ph)SPSR ddPTM_A459_MK2206_30min_R1 1 TPGVLLPGAGGAAGFGMTSPPPPTSPSR 28 0 Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;Q96L91-4;A0A0A0MR72;A0A0A0MR80;Q6ZTU2-4;Q6ZTU2-5;Q6ZTU2-2;Q6ZTU2-6;Q6ZTU2 Q96L91-3 EP400;EP400NL E1A-binding protein p400;EP400 N-terminal-like protein 1 TPGVLLPGAGGAAGFGMTSPPPPT(0.45)S(0.45)PS(0.1)R 135.12 3.26E-12 47732000 2124.7 2291.6 1942.7 1806.4 2140.7 1933.9 2099.7 1926.9 1910.1 1817 TRUE FALSE 1943.983108 2142.416423 1810.834937 1945.529241 2055.431386 2043.395747 1959.632844 1910.053316 2108.66173 2042.103678 0.95195123 1.049122259 0.886749755 0.952708358 1.00652646 1.000632715 0.959614767 0.935336113 1.032592886 1 10.9958404 -6.239239608 24.06615537 0.984984625 0.96124763 0.088166874 0.044430567 1669.062264 1809381.651 0.013324109 0.017182226 5.76E-07 6.239239608 -0.023736995 TPHDILEDINAS(ph)PEMR ddPTM_A459_MK2206_30min_R1 5 TPHDILEDINASPEMR 16 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR 256.79 4.51E-39 78868200 7255.53 6611.03 6727.82 6176.93 7434.84 7201.63 6801.15 6661.52 6097.48 5591.36 TRUE FALSE 6638.409073 6180.650745 6271.154323 6652.678219 7138.694579 7609.380067 6347.457693 6603.279033 6731.334866 6284.059889 1.056388575 0.983544214 0.997946301 1.058659264 1.136000405 1.210901901 1.01008867 1.050798234 1.071176116 1 12.61748121 -5.923501234 4.799911086 1.086411612 1.010527095 0.195551295 0.059830828 0.317511753 13.49477546 0.018055024 0.027206449 1.19E-06 5.923501234 -0.075884517 TPHDILEDINAS(ph)PEMR ddPTM_A459_MK2206_30min_R2 8 TPHDILEDINASPEMR 16 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR 163.44 3.19E-05 32381400 85911.8 97970.8 86073.3 103995.9 93958.4 97369.4 99806.6 79871.6 88832.4 91843.1 TRUE FALSE 92489.27346 93105.71253 88942.94086 95499.1023 90269.12111 101074.8607 86701.87353 90311.09236 96558.88158 88846.26717 1.041003482 1.047941748 1.001088101 1.0748803 1.016014786 1.137637674 0.975863998 1.016487189 1.086808536 1 16.43902354 -9.977133785 12.7314499 1.000000536 1.043032095 0.081718741 0.044288305 0 0 0.04104947 0.009955959 1.05E-10 9.977133785 0.043031559 TPHPS(ph)PAHSSR ddPTM_A459_MK2206_30min_R2 1 TPHPSPAHSSR 11 0 A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4 A0A0A0MTL6 FAM65A Protein FAM65A 1 TPHPS(1)PAHSSR 108.66 0.0065107 676400 693.51 3461.8 1220.8 4394 4230 8755.3 5975.4 4176.7 4077.4 2070.2 TRUE FALSE 746.6056588 3289.892046 1261.500863 4034.996144 4063.908946 9088.489077 5190.822802 4722.609031 4432.044882 2002.649544 0.372808943 1.642769728 0.629915936 2.014828884 2.029266158 4.538232416 2.591977622 2.358180464 2.213090601 1 10.96769426 -6.020085116 2.340477312 2.64025474 0.953733498 0.371799518 0.889089759 0.30302702 3.318898034 0.278990437 0.422531339 9.55E-07 6.020085116 -1.686521242 TPHS(ph)PPLAK ddPTM_A459_MK2206_30min_R1 1 TPHSPPLAK 9 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 T(0.004)PHS(0.996)PPLAK 73.9 0.041722 32334000 15030 14477 14326 12351 15401 13609 14950 14444 13040 11656 TRUE FALSE 13751.61957 13534.54467 13353.59103 13302.27616 14787.54556 14379.52982 13952.71278 14317.71763 14395.55466 13100.03328 1.049739286 1.033168724 1.019355505 1.015438349 1.128817404 1.097671244 1.065089873 1.092952768 1.098894511 1 13.67728286 -6.240665747 24.80932836 1.085299567 1.028973555 0.364741445 0.032709675 732.2466832 874500.8048 0.009241533 0.011917173 5.75E-07 6.240665747 -0.056326013 TPHS(ph)PPLAK ddPTM_A459_MK2206_30min_R2 3 TPHSPPLAK 9 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 T(0.005)PHS(0.995)PPLAK;TPHS(1)PPLAK;T(0.002)PHS(0.998)PPLAK 81.525 0.028876 186378000 411340 559990 476990 586010 473660 412650 518020 417110 459510 422200 TRUE FALSE 442832.5067 532181.7109 492892.6085 538131.1084 455061.7284 428353.6849 450003.3517 471627.7092 499477.3492 408423.6486 1.084247957 1.303013948 1.206817015 1.31758068 1.114190449 1.048797459 1.101805327 1.154751227 1.222939345 1 18.63970688 -6.329981984 12.00824145 1.111580267 1.231753305 0.347079024 0.080982966 1.300081318 225.9976568 0.024722355 0.028032853 4.68E-07 6.329981984 0.120173038 TPHTATLR ddPTM_A459_MK2206_30min_R2 1 TPHTATLR 8 0 P41250 P41250 GARS Glycine--tRNA ligase 0 112.41 0.015714 972890 455.95 963.69 762.48 850.33 0 876.88 477.86 0 0 679.63 FALSE TRUE 490.8578826 915.8345559 787.9007026 780.8553189 0 910.2502829 415.116408 0 0 657.4537288 0.746604455 1.393002299 1.198412403 1.187696236 0 1.384508511 0.631400188 0 0 1 9.360745552 -6.773951015 0.803617993 0.329959916 1.147201688 0.236484752 0.47640657 0.851321697 1.199983186 0.327523916 0.309751596 1.68E-07 6.773951015 0.817241772 TPHVQAVQGPLGS(ph)PPK ddPTM_A459_MK2206_30min_R1 2 TPHVQAVQGPLGSPPK 16 0 Q15149 Q15149 PLEC Plectin 1 TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK 103.31 0.002958 147191000 9344.6 11045.6 10839.8 9894.2 6766.6 6336.5 8195.3 8210.2 10034.7 9305.3 TRUE FALSE 8549.7927 10326.52943 10104.02458 10656.253 6497.071993 6695.267154 7648.60649 8138.419087 11077.84297 10458.11082 0.817527453 0.987418245 0.966142428 1.018946269 0.621247194 0.640198528 0.73135642 0.778192088 1.059258519 1 13.35233464 -6.239738439 24.82048261 0.782025244 0.951690278 0.187563503 0.140330367 1104.460545 1263228.175 0.042547731 0.054876675 5.76E-07 6.239738439 0.169665034 TPHVQAVQGPLGS(ph)PPK ddPTM_A459_MK2206_30min_R2 4 TPHVQAVQGPLGSPPK 16 0 Q15149 Q15149 PLEC Plectin 1 TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK 163.41 2.13E-05 279334000 486854 455351 479334 408236 437429 316292 490822 367608 342058 489940 TRUE FALSE 524127.9166 432738.9315 495314.7563 374881.8129 420253.3396 328328.7137 426376.4818 415655.6278 371809.5865 473953.2979 1.105864056 0.913041292 1.045070809 0.790967833 0.886697785 0.692744866 0.89961708 0.876997016 0.784485704 1 18.85438538 -5.758573083 24.99996236 0.839607811 1.010497002 0.440625536 0.089276577 66.61710102 581024.1266 0.023205921 0.038037322 1.74E-06 5.758573083 0.170889191 TPHYGSQT(ph)PLHDGSR ddPTM_A459_MK2206_30min_R1 1 TPHYGSQTPLHDGSR 15 0 O00267-2;O00267 O00267-2 SUPT5H Transcription elongation factor SPT5 1 TPHYGSQT(0.999)PLHDGS(0.001)R 111.93 0.0042489 2427200 806.82 550.68 683.03 667.74 1109.9 1106 1102.6 1197.9 559.76 721 TRUE FALSE 738.1957222 514.8306319 636.6678266 719.1694505 1065.690333 1168.620764 1029.047566 1187.426887 617.9490551 810.3229233 0.910989559 0.635340081 0.785696428 0.887509695 1.315142769 1.442166735 1.269922813 1.465374917 0.762596043 1 9.662353143 -6.132616931 3.821428896 1.246545591 0.771519031 0.477835739 0.206615892 0.188032067 4.829647576 0.061432834 0.081731124 7.37E-07 6.132616931 -0.47502656 TPHYGSQT(ph)PLHDGSR ddPTM_A459_MK2206_30min_R2 1 TPHYGSQTPLHDGSR 15 0 O00267-2;O00267 O00267-2 SUPT5H Transcription elongation factor SPT5 1 TPHYGSQT(0.992)PLHDGS(0.008)R 103.73 0.0074092 1882100 4138.7 8344.2 7923.7 7586.1 10406 9156.7 6981 5101.8 7476.5 6884.6 TRUE FALSE 4455.562054 7929.839162 8187.872203 6966.291363 9997.408154 9505.164635 6064.386314 5768.622777 8126.792456 6659.956066 0.669007725 1.190674395 1.229418351 1.045996594 1.501122238 1.427211312 0.910574522 0.86616529 1.220247157 1 12.70129694 -7.299677177 24.95594578 0.988093838 1.188977602 0.125297092 0.228375343 1142.636214 745738.6403 0.099112302 0.06682269 5.02E-08 7.299677177 0.200883764 TPIS(ph)PLK ddPTM_A459_MK2206_30min_R2 1 TPISPLK 7 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.044)PIS(0.956)PLK 95.775 0.023573 106290000 205350 215890 219220 184200 205550 160410 242980 175570 188800 230730 TRUE FALSE 221071.7539 205169.2165 226528.6854 169150.2708 197479.0742 166514.515 211076.4341 198517.6018 205221.4827 223201.299 0.990459083 0.91921157 1.014907558 0.757837304 0.884757728 0.746028431 0.945677445 0.889410603 0.919445736 1 17.7679859 -5.732567458 24.99999099 0.870639312 0.96929462 0.249100968 0.076542586 290.364705 251422.5866 0.02015621 0.034904046 1.85E-06 5.732567458 0.098655308 TPITSVPLGPLAS(ph)SPTK ddPTM_A459_MK2206_30min_R1 1 TPITSVPLGPLASSPTK 17 0 Q15911 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 TPITSVPLGPLAS(0.799)S(0.2)PT(0.002)K 213.94 1.24E-09 26094000 3028.4 3674.3 3926.5 3416.2 3028.7 2358.1 3231.9 3390.6 3966.8 3397.7 TRUE FALSE 2770.818677 3435.102402 3659.98012 3679.316316 2908.060466 2491.613584 3016.305848 3360.956342 4379.163055 3818.632727 0.725604915 0.899563443 0.958453033 0.963516677 0.761544949 0.652488407 0.789891582 0.880146529 1.146788227 1 11.89884045 -8.126620018 4.87928426 1.069772925 0.827042588 0.497555362 0.09943663 0.209341287 7.206206958 0.079356969 0.028446659 7.47E-09 8.126620018 -0.242730338 TPITSVPLGPLASS(ph)PTK ddPTM_A459_MK2206_30min_R1 1 TPITSVPLGPLASSPTK 17 0 Q15911 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 TPITSVPLGPLAS(0.076)S(0.92)PT(0.005)K 230.82 1.93E-16 27303000 3314.4 3814.8 4008.5 3258.6 3157.5 2616.9 3586.2 3376.5 3665.9 3815.2 TRUE FALSE 3032.492875 3566.455827 3736.414188 3509.577937 3031.730089 2765.066617 3346.971141 3346.979616 4046.983424 4287.855779 0.707228282 0.831757412 0.871394557 0.818492533 0.707050387 0.644859986 0.780569896 0.780571873 0.94382452 1 12.06604067 -8.332216826 2.889994616 0.998388177 0.767625383 0.630106012 0.063341519 0.186754141 2.894957393 0.067029886 0.01850148 4.65E-09 8.332216826 -0.230762794 TPITSVPLGPLASS(ph)PTK ddPTM_A459_MK2206_30min_R2 2 TPITSVPLGPLASSPTK 17 0 Q15911 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 TPITSVPLGPLAS(0.039)S(0.577)PT(0.384)K;TPITSVPLGPLAS(0.045)S(0.955)PTK 273.52 6.51E-52 45644000 183637 232774 220241 216102 192140 170997 259590 188727 162427 230988 TRUE FALSE 197696.3899 221214.7816 227583.725 198445.7753 184595.6182 177504.4107 225505.5212 213394.2669 176554.6069 223450.8805 0.884742049 0.989992884 1.018495539 0.888095741 0.826112736 0.794377763 1.009195044 0.954994075 0.790127148 1 17.7695982 -5.788234198 24.69280289 0.890557763 0.966968428 0.136546151 0.07977902 350.3934515 322904.0987 0.023117095 0.034299224 1.63E-06 5.788234198 0.076410665 TPKDS(ph)PGIPPSAGAHQLFR ddPTM_A459_MK2206_30min_R1 2 TPKDSPGIPPSAGAHQLFR 19 1 E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q5SVM6 E9PGT3 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 1 T(0.126)PKDS(0.874)PGIPPSAGAHQLFR;T(0.16)PKDS(0.836)PGIPPS(0.004)AGAHQLFR 86.488 0.0015264 38237000 10141.3 8187.6 10266.9 7895.9 11965.6 11017.2 11399.7 11032 7612.4 7335.8 TRUE FALSE 9278.729181 7654.585752 9570.011433 8504.043586 11488.98481 11640.98434 10639.24681 10935.54839 8403.736221 8244.614286 1.125429142 0.928434671 1.160759145 1.031466517 1.393513925 1.411950146 1.290448097 1.3263869 1.019300107 1 13.00923629 -6.243464988 24.69673251 1.267679136 1.059104426 0.258891142 0.143711139 846.27922 1162783.74 0.041874435 0.053940445 5.71E-07 6.243464988 -0.208574709 TPKDS(ph)PGIPPSAGAHQLFR ddPTM_A459_MK2206_30min_R2 5 TPKDSPGIPPSAGAHQLFR 19 1 E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q5SVM6 E9PGT3 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 1 T(0.248)PKDS(0.726)PGIPPS(0.025)AGAHQLFR;T(0.233)PKDS(0.658)PGIPPS(0.109)AGAHQLFR;T(0.214)PKDS(0.786)PGIPPSAGAHQLFR;T(0.244)PKDS(0.73)PGIPPS(0.025)AGAHQLFR;T(0.255)PKDS(0.744)PGIPPSAGAHQLFR 87.419 0.0014385 76370500 205920 406816 333433 451768 503980 456775 492053 328789 428604 362575 TRUE FALSE 221685.3935 386614.109 344549.4898 414857.1093 484191.2129 474157.8927 427445.85 371762.8512 465883.2012 350744.2074 0.632042921 1.10226798 0.982338361 1.18279105 1.380468166 1.351862362 1.218682564 1.059925847 1.32827055 1 18.42005975 -4.425454789 1.022493148 1.223726916 4.47E-11 0.612341937 0.132647434 2.385409863 1.238707589 0.043196164 3.798600475 3.75E-05 4.425454789 -1.223726916 TPKDS(ph)PGIPPSANAHQLFR ddPTM_A459_MK2206_30min_R1 1 TPKDSPGIPPSANAHQLFR 19 1 B4DG22;B1AXG1;B7ZB17;P51812 B4DG22 RPS6KA3 Ribosomal protein S6 kinase alpha-3 1 T(0.108)PKDS(0.888)PGIPPS(0.004)ANAHQLFR 64.346 0.014155 26606000 3570.8 2874.2 3701.5 2824.6 3831.5 3868.5 4172.3 3890.9 3041.2 3001.3 TRUE FALSE 3267.084709 2687.089058 3450.252493 3042.151181 3678.883242 4087.531127 3893.97348 3856.882272 3357.343623 3373.123703 0.968563562 0.796617407 1.022865687 0.901879519 1.090645813 1.211794019 1.154411704 1.143415603 0.99532182 1 11.71986951 -6.308440972 5.192836507 1.116500893 0.920338808 0.51831757 0.082662144 0.152702105 9.839506928 0.025538921 0.029566847 4.92E-07 6.308440972 -0.196162085 TPKDS(ph)PGIPPSANAHQLFR ddPTM_A459_MK2206_30min_R2 1 TPKDSPGIPPSANAHQLFR 19 1 B4DG22;B1AXG1;B7ZB17;P51812 B4DG22 RPS6KA3 Ribosomal protein S6 kinase alpha-3 1 T(0.155)PKDS(0.844)PGIPPS(0.001)ANAHQLFR 67.097 0.01173 15198000 16421 30350 29559 37329 43996 40766 48805 40175 43121 34755 TRUE FALSE 17678.20439 28842.86313 30544.48231 34279.10129 42268.49598 42317.3787 42396.84487 45426.01044 46871.58664 33620.9472 0.525809231 0.857883717 0.908495591 1.019575715 1.257207173 1.258661109 1.261024701 1.351122268 1.394118564 1 15.03707275 -5.131457875 0.677040956 1.293316978 0.318391466 0.807188892 0.11315589 0.851876582 0.403441753 0.051857409 0.59552348 7.39E-06 5.131457875 -0.974925512 TPKDS(ph)PGLPASANAHQLFK ddPTM_A459_MK2206_30min_R2 1 TPKDSPGLPASANAHQLFK 19 1 Q9UK32-2;Q9UK32 Q9UK32-2 RPS6KA6 Ribosomal protein S6 kinase alpha-6 1 T(0.271)PKDS(0.728)PGLPAS(0.001)ANAHQLFK 63.536 0.011974 5717200 59593 81382 80366 94347 105950 87808 102810 78463 75602 84186 TRUE FALSE 64155.4859 77340.68822 83045.36233 86638.5483 101789.8706 91149.59497 89310.9235 88718.3835 82177.7253 81439.01771 0.787773327 0.949676094 1.019724509 1.063845694 1.249890697 1.119237406 1.096660127 1.089384253 1.009070684 1 16.31343254 -4.887672977 1.266429874 1.100148873 0.692912271 0.665724057 0.066243084 0.7096287 1.136039572 0.020976778 0.360250444 1.30E-05 4.887672977 -0.407236602 TPLALAGS(ph)PTPK ddPTM_A459_MK2206_30min_R2 1 TPLALAGSPTPK 12 0 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 TPLALAGS(0.699)PT(0.301)PK 120.29 0.0040688 31381000 221530 201450 185930 201330 179960 129780 211480 176330 147930 216590 TRUE FALSE 238490.5071 191446.2859 192128.8134 184880.695 172893.8662 134718.8688 183712.422 199376.9364 160796.684 209522.686 1.138256251 0.91372581 0.916983345 0.882389867 0.825179695 0.642979867 0.876813988 0.951576845 0.767442834 1 17.67674693 TPLDLFAHFGPEPGDHSDPLPPSAPS(ph)PTR ddPTM_A459_MK2206_30min_R1 2 TPLDLFAHFGPEPGDHSDPLPPSAPSPTR 29 0 Q8N1G0;Q8N1G0-2;F8WCX2 Q8N1G0 ZNF687 Zinc finger protein 687 1 TPLDLFAHFGPEPGDHSDPLPPS(0.073)APS(0.752)PT(0.175)R;TPLDLFAHFGPEPGDHSDPLPPS(0.078)APS(0.692)PT(0.231)R 137.9 3.12E-14 31785000 7162.2 6193.5 6824.7 5565 6687.3 7032.6 7584.8 5863.6 6834.1 7105.5 TRUE FALSE 6553.01728 5790.302024 6361.458379 5993.617264 6420.93068 7430.779735 7078.831831 5812.335163 7544.529151 7985.782984 0.820585445 0.725076306 0.796597953 0.750535956 0.804045226 0.930501085 0.886429276 0.727835351 0.944745076 1 12.96321815 -6.58593713 6.064216116 0.879764984 0.772032681 0.405978804 0.070741139 0.231136937 16.29530704 0.023000456 0.023059246 2.59E-07 6.58593713 -0.107732303 TPLDLFAHFGPEPGDHSDPLPPSAPS(ph)PTR ddPTM_A459_MK2206_30min_R2 4 TPLDLFAHFGPEPGDHSDPLPPSAPSPTR 29 0 Q8N1G0;Q8N1G0-2;F8WCX2 Q8N1G0 ZNF687 Zinc finger protein 687 1 TPLDLFAHFGPEPGDHSDPLPPS(0.024)APS(0.744)PT(0.232)R;TPLDLFAHFGPEPGDHSDPLPPS(0.145)APS(0.608)PT(0.247)R;TPLDLFAHFGPEPGDHS(0.001)DPLPPS(0.359)APS(0.578)PT(0.062)R;TPLDLFAHFGPEPGDHSDPLPPS(0.041)APS(0.884)PT(0.075)R 122.19 7.01E-14 29856600 44830.9 50818.1 46098.9 51341 43313.1 51667 51892 49861 38192.5 49501.5 TRUE FALSE 48263.18817 48294.54705 47635.81432 47146.27607 41612.41006 53633.22389 45078.51807 56378.0039 41514.41461 47886.27011 1.007871109 1.008525971 0.994769779 0.984546843 0.868984157 1.120012558 0.941366241 1.177331285 0.866937736 1 15.54732445 -6.772093355 24.99996949 1.027227519 0.976774217 0.065658298 0.088839564 610.4728331 1432489.812 0.02917638 0.025990131 1.69E-07 6.772093355 -0.050453302 TPLGAS(ph)LDEQSSSTLK ddPTM_A459_MK2206_30min_R1 1 TPLGASLDEQSSSTLK 16 0 E9PHV5;P28290-3;P28290 E9PHV5 SSFA2 Sperm-specific antigen 2 1 TPLGAS(1)LDEQSSSTLK 139.12 0.00040292 11920000 3332.4 2504 2353.2 3048.4 1848.4 3164.3 2156 2161.9 1932 1450.3 TRUE FALSE 3048.961881 2340.989145 2193.47134 3283.188296 1774.774314 3343.459931 2012.177174 2142.998736 2132.838314 1629.974113 1.870558468 1.436212469 1.345709311 2.014257938 1.08883589 2.051234989 1.234484129 1.314744031 1.308510544 1 10.67063334 -8.124956927 0.784312823 1.023873161 1.608245259 0.29778353 0.300133741 0.769272728 0.985102896 0.268983383 0.108847216 7.50E-09 8.124956927 0.584372098 TPLGAS(ph)LDEQSSSTLK ddPTM_A459_MK2206_30min_R2 2 TPLGASLDEQSSSTLK 16 0 E9PHV5;P28290-3;P28290 E9PHV5 SSFA2 Sperm-specific antigen 2 1 T(0.038)PLGAS(0.957)LDEQS(0.004)S(0.001)STLK;T(0.001)PLGAS(0.985)LDEQS(0.009)S(0.003)S(0.001)TLK 128.38 0.00095864 77355000 72500 121760 75457 90669 67570 67236 82188 81750 76637 58235 TRUE FALSE 78050.65574 115713.5755 77972.69872 83261.05266 64916.86229 69794.71309 71396.61687 92435.00569 83302.74773 56334.79672 1.385478608 2.05403378 1.384094791 1.477968458 1.152340402 1.23892722 1.267362643 1.640815465 1.478708588 1 15.7817387 -5.444168125 11.60369745 1.34342747 1.720284462 0.318904167 0.227923264 0.985889588 142.9272793 0.058242784 0.121267512 3.60E-06 5.444168125 0.376856991 TPLLSSLS(ph)ATSNNSTVACIDR ddPTM_A459_MK2206_30min_R2 2 TPLLSSLSATSNNSTVACIDR 21 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 TPLLS(0.001)S(0.003)LS(0.995)AT(0.001)S(0.001)NNS(0.001)TVACIDR;TPLLS(0.003)S(0.084)LS(0.894)AT(0.007)S(0.008)NNS(0.003)T(0.001)VACIDR 96.55 0.00040169 1939000 9784.2 6243.3 9042.8 7654.4 7991.1 7626.3 10459.9 7159.7 11733.7 7863 TRUE FALSE 10533.28587 5933.266801 9344.282439 7029.011035 7677.329262 7916.524191 9086.502565 8095.497373 12754.27602 7606.430954 1.384786891 0.780032953 1.228471342 0.92408793 1.009320838 1.040767245 1.194581614 1.064296438 1.676775362 1 12.89300396 -8.116074557 20.92312171 1.349175712 1.068476394 0.182863947 0.218892792 8.674423773 1544.590854 0.133947143 0.050627179 7.65E-09 8.116074557 -0.280699318 TPLLSSLSAT(ph)SNNSTVACIDR ddPTM_A459_MK2206_30min_R2 1 TPLLSSLSATSNNSTVACIDR 21 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 TPLLSSLS(0.008)AT(0.461)S(0.461)NNS(0.052)T(0.018)VACIDR 106.31 0.00032793 3150200 16097 9115.4 8351.3 8312.7 8010.1 12090 14359 5807.3 14625 11747 TRUE FALSE 17329.3987 8662.742491 8629.728174 7633.525819 7695.583226 12550.09342 12473.64605 6566.334049 15897.05606 11363.69635 1.524979035 0.762317315 0.75941207 0.671746726 0.677207749 1.104402391 1.097675058 0.577834346 1.398933549 1 13.47214457 -6.782565 24.97356983 1.01325281 0.854470161 0.059217719 0.297635709 768.1149733 908017.6942 0.104393529 0.092158118 1.65E-07 6.782565 -0.158782649 TPLLSSLSATS(ph)NNSTVACIDR ddPTM_A459_MK2206_30min_R1 1 TPLLSSLSATSNNSTVACIDR 21 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 TPLLSSLSAT(0.067)S(0.919)NNS(0.014)TVACIDR 141.3 5.32E-06 0 594.87 624.13 495.21 421.82 528.96 547.6 778.24 627.83 636.14 895.37 TRUE FALSE 544.2731827 583.4990236 461.5965249 454.3086495 507.8904031 578.6046388 726.3250296 622.3409485 702.2690294 1006.295195 0.540868311 0.579848762 0.458708863 0.451466579 0.504713135 0.574984996 0.721781275 0.618447699 0.697875765 1 9.974837864 -8.825815508 0.429902571 1.030306007 0.494204647 0.866825783 0.056319177 0.648195301 0.259532249 0.108557276 0.042866023 1.49E-09 8.825815508 -0.53610136 TPLLSSLSATS(ph)NNSTVACIDR ddPTM_A459_MK2206_30min_R2 1 TPLLSSLSATSNNSTVACIDR 21 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 TPLLSSLSAT(0.005)S(0.994)NNS(0.001)TVACIDR 223.76 6.36E-21 3405700 19603 12449 13359 12204 15744 16438 20820 10389 19869 18573 TRUE FALSE 21103.82075 11830.80076 13804.38239 11206.89416 15125.81145 17063.55961 18086.30899 11746.87797 21597.16971 17966.96453 1.174590216 0.658475211 0.768320234 0.623750002 0.841867942 0.949718556 1.006642439 0.653804261 1.202048886 1 14.13305907 -6.636921463 4.531472589 0.943025981 0.786705954 0.130007035 0.187708788 0.451818196 15.87075038 0.061544028 0.061283187 2.31E-07 6.636921463 -0.156320027 TPLS(ph)PSPMK ddPTM_A459_MK2206_30min_R2 1 TPLSPSPMK 9 0 F8WAN1;Q69YQ0-2;Q69YQ0;A0A494C1J1 F8WAN1 SPECC1L-ADORA2A;SPECC1L Cytospin-A 1 TPLS(0.987)PS(0.012)PMK 112.83 0.0094646 3840700 44321 34411 39363 38831 36418 29253 56247 44021 28009 57436 TRUE FALSE 47714.24984 32702.19978 40675.34277 35658.38309 34988.04633 30366.24341 48861.70134 49774.69585 30445.17219 55561.86802 0.858758921 0.58857272 0.732072989 0.641777974 0.629713283 0.546530282 0.879410701 0.895842736 0.547950839 1 15.76180748 -7.275073885 24.83968501 0.822121299 0.662927972 0.264961245 0.133897601 1057.886113 1927275.662 0.053810781 0.036498526 5.31E-08 7.275073885 -0.159193327 TPLSQS(ph)MSVLPTSKPEK ddPTM_A459_MK2206_30min_R1 1 TPLSQSMSVLPTSKPEK 17 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 T(0.001)PLS(0.019)QS(0.973)MS(0.007)VLPTSKPEK 112.64 0.0010453 40966000 2817.3 2348.8 2337 2906.3 2404.3 2193.9 2772.9 2559.3 2528.4 1841.9 TRUE FALSE 2577.673841 2195.892693 2178.370951 3130.14373 2308.53164 2318.116722 2587.9249 2536.92431 2791.236228 2070.088478 1.24519984 1.060772386 1.052308138 1.512082099 1.11518501 1.119815287 1.250151831 1.225514918 1.348365666 1 11.01547672 TPLSQS(ph)MSVLPTSKPEK ddPTM_A459_MK2206_30min_R2 2 TPLSQSMSVLPTSKPEK 17 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 T(0.159)PLS(0.146)QS(0.687)MS(0.008)VLPTSKPEK;T(0.005)PLS(0.006)QS(0.988)MS(0.002)VLPTSKPEK 109.83 0.0012074 35471000 90719 135796 102645 96332 109430 93888 98318 73958 82136 86898 TRUE FALSE 97664.51639 129052.5681 106067.1331 88461.36745 105133.2284 97460.97363 85408.7285 83624.56454 89280.04081 84062.52538 1.161808023 1.535197373 1.261764771 1.052328217 1.250655127 1.159386697 1.016014307 0.994790058 1.062067079 1 16.35917518 -6.283032567 0.57425951 1.000451774 1.373331548 0.502100185 0.112244198 0.851920531 0.5792122 0.084959635 0.168579674 5.21E-07 6.283032567 0.372879774 TPLYLQPDAYGS(ph)LDR ddPTM_A459_MK2206_30min_R1 3 TPLYLQPDAYGSLDR 15 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 TPLYLQPDAYGS(1)LDR;TPLYLQPDAYGS(1)LDR;TPLYLQPDAYGS(1)LDR 142.39 0.00038161 31072000 5135.1 4414.1 3055.08 2785.87 3801.11 3058.46 4001.9 2774.56 3119.32 2883.54 TRUE FALSE 4698.33278 4126.741288 2847.709682 3000.43819 3649.70374 3231.627362 3734.940553 2750.302314 3443.584477 3240.774705 1.449756064 1.273381109 0.878712635 0.925839796 1.126182494 0.997177421 1.152483864 0.84865582 1.062580645 1 11.66212301 -5.057465214 4.053895508 1.001834934 1.422795123 0.71627855 0.094106941 0.105506828 3.453163063 0.024249631 0.082235236 8.76E-06 5.057465214 0.420960189 TPMYGSQT(ph)PLQDGSR ddPTM_A459_MK2206_30min_R1 2 TPMYGSQTPLQDGSR 15 0 O00267-2;O00267 O00267-2 SUPT5H Transcription elongation factor SPT5 1 TPMYGS(0.003)QT(0.997)PLQDGSR;TPMYGS(0.009)QT(0.989)PLQDGS(0.002)R 152.68 0.0005199 8265700 1181.89 1011.98 880.59 1080.94 2055.78 1474.44 1450.78 1315.7 1047.95 1000.45 TRUE FALSE 1081.364049 946.0999181 820.8180043 1164.194186 1973.893929 1557.921519 1354.001113 1304.196974 1156.888153 1124.393299 0.96173114 0.84143148 0.730009691 1.035397656 1.755519115 1.385566349 1.204205961 1.159911727 1.0288999 1 10.13493105 -6.004911025 24.47814021 1.279223182 0.850529533 0.444886629 0.206308126 151.2520709 753901.5504 0.061840144 0.088933168 9.89E-07 6.004911025 -0.428693649 TPMYGSQT(ph)PLQDGSR ddPTM_A459_MK2206_30min_R2 1 TPMYGSQTPLQDGSR 15 0 O00267-2;O00267 O00267-2 SUPT5H Transcription elongation factor SPT5 1 TPMYGS(0.425)QT(0.574)PLQDGS(0.001)R 86.777 0.045225 9400200 14355 12540 15831 20628 13468 13769 17230 11915 13790 14447 TRUE FALSE 15454.02984 11917.28183 16358.79764 18942.62641 12939.17865 14292.98894 14967.6803 13472.33141 14989.42927 13975.59557 1.105786852 0.852720857 1.170525975 1.355407454 0.925840948 1.022710543 1.070986938 0.963989788 1.072543148 1 13.77062214 TPNTEQQTPLFQVIS(ph)PQR ddPTM_A459_MK2206_30min_R1 1 TPNTEQQTPLFQVISPQR 18 0 Q8IZD4;Q8IZD4-2 Q8IZD4 DCP1B mRNA-decapping enzyme 1B 1 TPNTEQQTPLFQVIS(1)PQR 179.87 1.47E-09 4176000 357.67 399.77 389.04 412.84 530.87 697.05 540.85 333.9 521.03 501.99 TRUE FALSE 327.2482883 373.7449003 362.6330487 444.6370083 509.7243238 736.5163686 504.7708833 330.9807475 575.192933 564.180311 0.580042022 0.662456475 0.642760908 0.78811153 0.903477689 1.305462729 0.8946978 0.586657742 1.019519685 1 9.140012509 -5.99920332 2.428780147 0.944997329 0.628717272 0.435768912 0.165655025 0.319169173 3.783327213 0.055998141 0.085579376 1.00E-06 5.99920332 -0.316280057 TPNTEQQTPLFQVIS(ph)PQR ddPTM_A459_MK2206_30min_R2 4 TPNTEQQTPLFQVISPQR 18 0 Q8IZD4;Q8IZD4-2 Q8IZD4 DCP1B mRNA-decapping enzyme 1B 1 TPNT(0.004)EQQT(0.028)PLFQVIS(0.968)PQR;TPNTEQQT(0.003)PLFQVIS(0.997)PQR;TPNTEQQTPLFQVIS(1)PQR;TPNTEQQT(0.012)PLFQVIS(0.988)PQR 190.25 4.32E-15 13205400 74543 70404.9 65479 75532 65573.3 67717 82113 63194 56008.5 74386 TRUE FALSE 80250.06939 66908.69504 67662.03718 69360.79399 62998.56276 70294.01789 71331.46446 71453.67278 60880.01809 71958.79091 1.115222593 0.929819612 0.940288689 0.963896045 0.875481119 0.976864911 0.991282143 0.992980453 0.846040037 1 16.13488333 -4.757970801 24.9799451 0.946586006 1.115222832 0.520008016 0.048688668 78.76433538 567154.4854 0.01179631 0.084193251 1.75E-05 4.757970801 0.168636826 TPPGALLGAPPPLVPAPRPS(ph)SPPR ddPTM_A459_MK2206_30min_R2 2 TPPGALLGAPPPLVPAPRPSSPPR 24 1 J3KNZ9;Q9HAH7 J3KNZ9 FBRS Probable fibrosin-1 1 TPPGALLGAPPPLVPAPRPS(0.5)S(0.5)PPR;TPPGALLGAPPPLVPAPRPS(0.5)S(0.5)PPR 107.24 2.94E-07 20863000 22251.7 23753.2 20025.1 23555 19499.4 21130.6 25764.4 18185.1 18472.3 22047.2 TRUE FALSE 23955.30726 22573.65063 20692.72684 21630.48115 18733.75558 21934.73979 22381.50333 20561.95501 20078.98726 21327.80167 1.123196269 1.058414317 0.970223146 1.014191781 0.878372552 1.028457603 1.049405076 0.964091627 0.941446642 1 14.38044765 -4.994456165 2.331057437 0.980729256 1.13080995 0.501306181 0.045962766 0.328540044 2.950753487 0.012671256 0.084136728 1.01E-05 4.994456165 0.150080695 TPPGPCCS(ph)PGVGWAQR ddPTM_A459_MK2206_30min_R2 2 TPPGPCCSPGVGWAQR 16 0 H3BSW6;Q2VPK5-3;Q2VPK5;Q2VPK5-5 H3BSW6 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 1 T(0.21)PPGPCCS(0.79)PGVGWAQR;T(0.003)PPGPCCS(0.997)PGVGWAQR 99.796 0.0063572 18916500 9950.1 14403.8 11255.3 9332.5 10932.7 11528.9 11410.2 12459.2 12588 13031.9 TRUE FALSE 10711.88731 13688.52824 11630.54608 8570.004897 10503.42727 11967.64037 9912.027034 14087.66022 13682.88149 12606.67017 0.849699973 1.085816322 0.922570824 0.679799248 0.833164279 0.949310183 0.786252587 1.117476703 1.085368404 1 13.62189964 -7.770131167 24.99993328 1.076066965 0.876557732 0.42406808 0.104048091 198.2043992 570079.5813 0.059448634 0.029251313 1.70E-08 7.770131167 -0.199509233 TPPPPT(ph)LSPAAITVGR ddPTM_A459_MK2206_30min_R2 1 TPPPPTLSPAAITVGR 16 0 Q8NDX5-2;Q8NDX5;Q8NDX5-7;E7EX82;H7C4H9 Q8NDX5-2 PHC3 Polyhomeotic-like protein 3 1 T(0.006)PPPPT(0.652)LS(0.284)PAAIT(0.058)VGR 147.75 0.00072076 5792000 3798.7 1181.7 940.92 2750 2689.2 901.93 1154.8 0 885.62 2466.6 TRUE FALSE 4089.531393 1123.018496 972.2898032 2525.316203 2583.608496 936.2535782 1003.173373 0 962.6496268 2386.115044 1.713886932 0.470647255 0.407478175 1.058337992 1.082767783 0.392375707 0.42042121 0 0.403438061 1 11.22044789 -6.776145123 24.01573748 0.379320086 0.896434282 0.263173346 0.410012598 205.4228243 335470.0221 0.144169362 0.127747263 1.67E-07 6.776145123 0.517114196 TPPRDLPT(ph)IPGVTSPSSDEPPMEASQSHLR ddPTM_A459_MK2206_30min_R1 4 TPPRDLPTIPGVTSPSSDEPPMEASQSHLR 30 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 T(0.186)PPRDLPT(0.779)IPGVT(0.013)S(0.013)PS(0.004)S(0.005)DEPPMEASQSHLR;T(0.035)PPRDLPT(0.791)IPGVT(0.127)S(0.043)PS(0.003)S(0.001)DEPPMEASQSHLR;T(0.143)PPRDLPT(0.828)IPGVT(0.02)S(0.007)PS(0.001)SDEPPMEASQSHLR;T(0.406)PPRDLPT(0.466)IPGVT(0.078)S(0.018)PS(0.023)S(0.01)DEPPMEASQSHLR 94.003 2.85E-07 143541000 5192 4712.57 5422.13 3729.88 6775.95 5561.69 6305.64 5170.38 4137.18 3927.37 TRUE FALSE 4750.393136 4405.780836 5054.090923 4017.156004 6506.049563 5876.588081 5885.002261 5125.175913 4567.254666 4413.922246 1.076229456 0.998155516 1.145033972 0.910110278 1.473983727 1.331375533 1.333281815 1.161138694 1.03473836 1 12.1078455 -6.241684183 24.99507967 1.241467549 1.037984095 0.287657826 0.144545428 1046.920805 1324606.995 0.043538553 0.056127222 5.73E-07 6.241684183 -0.203483454 TPPRDLPT(ph)IPGVTSPSSDEPPMEASQSHLR ddPTM_A459_MK2206_30min_R2 5 TPPRDLPTIPGVTSPSSDEPPMEASQSHLR 30 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 T(0.32)PPRDLPT(0.654)IPGVT(0.011)S(0.01)PS(0.003)S(0.002)DEPPMEASQSHLR;T(0.128)PPRDLPT(0.868)IPGVT(0.004)SPSSDEPPMEASQSHLR;T(0.258)PPRDLPT(0.681)IPGVT(0.044)S(0.013)PS(0.003)S(0.001)DEPPMEASQSHLR;T(0.422)PPRDLPT(0.578)IPGVT(0.001)SPSSDEPPMEASQSHLR;T(0.153)PPRDLPT(0.817)IPGVT(0.023)S(0.007)PS(0.001)SDEPPMEASQSHLR 107.24 1.05E-10 350745000 29635.6 63179.1 53088.4 100401.7 80460.5 81251.3 79978.7 53278 67444.6 72126.6 TRUE FALSE 31904.52432 60041.71777 54858.34076 92198.55994 77301.21649 84343.37516 69477.40062 60241.61753 73310.8094 69773.11495 0.457261 0.860527981 0.786238952 1.321405243 1.107894015 1.208823416 0.995761773 0.863392978 1.050702831 1 16.09038362 -4.743268797 1.283727142 1.065014377 0.176393235 0.628107444 0.140048864 1.037535879 1.401580542 0.044034271 1.251366911 1.81E-05 4.743268797 -0.888621143 TPPRDLPTIPGVT(ph)SPSSDEPPMEASQSHLR ddPTM_A459_MK2206_30min_R1 1 TPPRDLPTIPGVTSPSSDEPPMEASQSHLR 30 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 T(0.202)PPRDLPT(0.014)IPGVT(0.326)S(0.326)PS(0.095)S(0.037)DEPPMEASQSHLR 55.852 0.0068697 32818000 2741.4 1776.1 2480 1674.6 2503.4 2688.3 2682.2 2041 1856.2 2151.5 TRUE FALSE 2508.229534 1660.475567 2311.66451 1803.577982 2403.684277 2840.509223 2503.275332 2023.155752 2049.158632 2418.044063 1.037296868 0.686701947 0.956005949 0.745883009 0.994061404 1.17471359 1.035248021 0.836691019 0.847444703 1 11.23962482 -6.294710571 23.90246254 0.985556482 0.851455068 0.185436595 0.127876316 635.1189435 456275.7394 0.040980615 0.046471426 5.07E-07 6.294710571 -0.134101414 TPPSTTVGS(ph)HSPPETPVLTR ddPTM_A459_MK2206_30min_R1 1 TPPSTTVGSHSPPETPVLTR 20 0 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 TPPS(0.012)T(0.052)T(0.235)VGS(0.668)HS(0.033)PPET(0.001)PVLTR 99.313 0.00082587 16182000 371.68 422.46 431.14 319.42 506.9 435.21 499.98 378.54 379.35 472.9 TRUE FALSE 340.0666642 394.9577772 401.875418 344.0217837 486.7090996 459.8512141 466.6272465 375.2304647 418.78479 531.4864222 0.639840737 0.743119223 0.756134872 0.647282356 0.915750769 0.865217238 0.877966448 0.706001977 0.78795012 1 9.053889026 -6.258114861 24.99684254 0.845392266 0.704170404 0.488998849 0.080392234 302.1007362 2271473.709 0.024654582 0.030529267 5.52E-07 6.258114861 -0.141221862 TPPSTTVGSHS(ph)PPETPVLTR ddPTM_A459_MK2206_30min_R1 4 TPPSTTVGSHSPPETPVLTR 20 0 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 TPPSTT(0.027)VGS(0.023)HS(0.906)PPET(0.043)PVLTR;TPPSTTVGS(0.006)HS(0.979)PPET(0.013)PVLT(0.002)R;T(0.003)PPS(0.003)T(0.003)T(0.003)VGS(0.264)HS(0.725)PPETPVLTR;TPPSTTVGS(0.009)HS(0.991)PPETPVLTR 133.93 0.00012707 118169900 4770.37 4910.89 4633.38 4236.93 4596.84 4466.76 4634.17 4614.97 4273.93 3950.55 TRUE FALSE 4364.624981 4591.190168 4318.879075 4563.259083 4413.738129 4719.664091 4325.032975 4574.621804 4718.220318 4439.973959 0.98302941 1.034057905 0.972726217 1.027767083 0.994090995 1.062993642 0.974112239 1.030326269 1.062668466 1 12.1163355 TPPSTTVGSHS(ph)PPETPVLTR ddPTM_A459_MK2206_30min_R2 3 TPPSTTVGSHSPPETPVLTR 20 0 Q9ULU4-19;Q9ULU4-16;H7C4X9;A0A087WVZ6;Q9ULU4-22;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-9;Q9ULU4-14;Q9ULU4-12;Q9ULU4-4;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 TPPST(0.001)T(0.011)VGS(0.12)HS(0.808)PPET(0.054)PVLT(0.006)R;TPPSTTVGS(0.001)HS(0.739)PPET(0.249)PVLT(0.011)R;T(0.001)PPS(0.002)T(0.002)T(0.002)VGS(0.112)HS(0.875)PPET(0.004)PVLT(0.001)R 131.13 0.00034688 112500000 24246.4 28901 26356.6 26075.6 27627.2 25984.8 26823.7 20111.4 26139.5 22591.1 TRUE FALSE 26102.72303 27465.81837 27235.31589 23945.14007 26542.41731 26973.66977 23301.71597 22740.02903 28413.06646 21853.95426 1.194416476 1.256789414 1.24624201 1.095689127 1.214536143 1.234269526 1.066247128 1.040545284 1.300133885 1 14.41560672 -14.52287874 0.083038288 0.440517326 1.340814739 0.307452222 0.082665923 292.2111868 1.702249427 29.9194252 2.544447137 3.00E-15 14.52287874 0.900297413 TPPT(ph)PPSSIVAK ddPTM_A459_MK2206_30min_R2 1 TPPTPPSSIVAK 12 0 Q96QT6;Q96QT6-4 Q96QT6 PHF12 PHD finger protein 12 1 T(0.426)PPT(0.448)PPS(0.096)S(0.03)IVAK 98 0.036684 15002000 44875 54829 48117 55313 50167 45877 50434 45368 43033 54112 TRUE FALSE 48310.6645 52106.27159 49721.19676 50793.75096 48197.19151 47622.88138 43811.95522 51297.75337 46775.93255 52346.32987 0.922904521 0.995414038 0.949850675 0.970340253 0.920736786 0.909765431 0.836963266 0.979968481 0.893585714 1 15.67580077 -6.291923271 8.457997555 0.917429197 0.96148194 0.122797745 0.045491869 0.550080292 142.4682087 0.01355041 0.015545798 5.11E-07 6.291923271 0.044052743 TPPTAALSAPPPLISTLGGRPVS(ph)PR ddPTM_A459_MK2206_30min_R1 2 TPPTAALSAPPPLISTLGGRPVSPR 25 1 A0A087WVB5;Q75MD7;A0A2R8Y8C6;Q8WXX7-2;Q8WXX7;A0A2R8Y568;A0A024RDL5;A0A2R8Y522;Q8WXX7-5 A0A087WVB5 AUTS2 Autism susceptibility gene 2 protein 1 TPPTAALSAPPPLIST(0.001)LGGRPVS(0.998)PR;TPPTAALSAPPPLIS(0.026)T(0.02)LGGRPVS(0.954)PR 157.2 4.01E-13 30712000 2677.2 2667.8 2968.4 2394.69 2879.1 2670.4 3100.9 2687.34 2431.9 2240.4 TRUE FALSE 2449.490081 2494.125735 2766.913278 2579.129439 2764.41935 2821.59574 2894.044619 2663.84487 2684.704708 2517.957666 0.972808286 0.990535214 1.09887204 1.024294202 1.097881584 1.120589031 1.149361905 1.057938704 1.066223131 1 11.29803831 -5.205578568 5.382055975 1.081996961 0.978714977 0.449271867 0.041915819 0.181234992 11.45677311 0.010935349 0.029873588 6.23E-06 5.205578568 -0.103281983 TPPTAALSAPPPLISTLGGRPVS(ph)PR ddPTM_A459_MK2206_30min_R2 2 TPPTAALSAPPPLISTLGGRPVSPR 25 1 A0A087WVB5;Q75MD7;A0A2R8Y8C6;Q8WXX7-2;Q8WXX7;A0A2R8Y568;A0A024RDL5;A0A2R8Y522;Q8WXX7-5 A0A087WVB5 AUTS2 Autism susceptibility gene 2 protein 1 TPPTAALSAPPPLIS(0.008)T(0.008)LGGRPVS(0.984)PR;TPPTAALSAPPPLIST(0.002)LGGRPVS(0.998)PR 129.22 3.50E-08 24269000 37953 44259 29022 48010 35653 39274 41579 23104 33132 37716 TRUE FALSE 40858.71086 42061.16242 29989.57899 44087.42942 34253.08408 40768.59959 36119.62735 26123.77213 36013.76147 36485.33001 1.11986683 1.152823954 0.821962662 1.20836044 0.938817987 1.117397035 0.989976721 0.71600756 0.987075119 1 15.15502888 -7.531916899 24.98249203 0.881523197 1.054459407 0.23413706 0.127122559 258.1341406 713501.4822 0.056169028 0.032488572 2.94E-08 7.531916899 0.17293621 TPPVAVTS(ph)PITHTAQSALK ddPTM_A459_MK2206_30min_R2 1 TPPVAVTSPITHTAQSALK 19 0 A0A0A0MRJ3;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-6;Q8NEY1-5;H0Y6F6 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 TPPVAVT(0.17)S(0.829)PIT(0.001)HTAQSALK 109.44 0.000461 5076200 20597 20371 23637 21073 18964 18139 18780 15717 17452 17673 TRUE FALSE 22173.92216 19359.40576 24425.04578 19351.26849 18219.37807 18829.29236 16314.16344 17771.26586 18969.94341 17096.33146 1.296998845 1.132371925 1.42867175 1.131895959 1.065689333 1.101364489 0.954249365 1.039478318 1.109591462 1 14.06139916 -5.976138902 9.592517323 1.050091804 1.272529921 0.647521404 0.079276048 0.195768759 73.70227868 0.021961609 0.032373314 1.06E-06 5.976138902 0.222438117 TPQAS(ph)TYSYETSDLCYTAEKK ddPTM_A459_MK2206_30min_R2 1 TPQASTYSYETSDLCYTAEKK 21 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.044)PQAS(0.379)T(0.379)Y(0.067)S(0.078)Y(0.051)ET(0.002)SDLCYTAEKK 82.609 0.001561 5027600 16909 17241 16844 24245 24106 16088 21364 13340 15964 20172 TRUE FALSE 18203.56604 16384.83701 17405.57055 22264.10594 23159.47732 16700.24011 18558.88114 15083.5838 17352.51986 19513.78929 0.932856544 0.839654296 0.891962616 1.140942213 1.186826247 0.855817384 0.951064955 0.772970517 0.889243991 1 14.25220633 TPQASTYSYET(ph)SDLCYTAEKKSPSEAR ddPTM_A459_MK2206_30min_R2 2 TPQASTYSYETSDLCYTAEKKSPSEAR 27 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPQASTYS(0.001)Y(0.005)ET(0.462)S(0.462)DLCY(0.032)T(0.016)AEKKS(0.016)PS(0.007)EAR;TPQASTYS(0.001)Y(0.018)ET(0.395)S(0.395)DLCY(0.102)T(0.037)AEKKS(0.037)PS(0.016)EAR 66.77 0.0014312 129035600 39309 98782 84093 96313 128529 80989 129250 73350 118812 76670 TRUE FALSE 42318.52726 93876.62952 86896.61865 88443.91981 123482.3057 84071.09315 112279.3197 82937.09685 129146.053 74168.26418 0.570574595 1.265725045 1.171614566 1.192476604 1.664894103 1.133518414 1.513845861 1.118228905 1.741257591 1 16.17851438 -4.577976862 2.009064932 1.332591578 1.57E-16 0.468147427 0.235886651 1.294620573 3.485856744 0.058202625 3.85064254 2.64E-05 4.577976862 -1.332591578 TPQASTYSYETS(ph)DLCYTAEKKSPSEAR ddPTM_A459_MK2206_30min_R1 1 TPQASTYSYETSDLCYTAEKKSPSEAR 27 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPQASTYS(0.005)Y(0.071)ET(0.145)S(0.372)DLCY(0.223)T(0.03)AEKKS(0.113)PS(0.042)EAR 66.77 0.00043315 66417000 4169.8 4100.3 4231.5 5297.7 3909.2 3247.6 2801.5 3996.7 2144.2 1130.3 TRUE FALSE 3815.136614 3833.369725 3944.27757 5705.729772 3753.488286 3431.476305 2614.617047 3961.757273 2367.097263 1270.330097 3.003263972 3.017617022 3.104923341 4.491533172 2.954734595 2.701247741 2.05821861 3.11868331 1.863371787 1 10.31098772 -8.400373055 0.498886511 0.958489139 3.358022216 0.628886821 0.537973818 0.687668504 0.434079979 0.653960771 0.334070279 3.98E-09 8.400373055 2.399533077 TPQASTYSYETSDLCY(ph)TAEKKSPSEAR ddPTM_A459_MK2206_30min_R2 1 TPQASTYSYETSDLCYTAEKKSPSEAR 27 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPQAS(0.002)T(0.004)Y(0.004)S(0.033)Y(0.075)ET(0.228)S(0.174)DLCY(0.405)T(0.052)AEKKS(0.02)PS(0.002)EAR 53.957 0.030633 32024000 3124.8 8476.8 5601.9 5744.4 10644 8270.7 7949.8 6165.7 8357.7 5950.9 TRUE FALSE 3364.037091 8055.854438 5788.66455 5275.064145 10226.06308 8585.447284 6905.981711 6971.57816 9084.637639 5756.72262 0.584366716 1.399382074 1.005548631 0.91633113 1.776368909 1.491377621 1.199637739 1.211032495 1.578091952 1 12.49103198 -6.223106121 24.97964519 1.383578912 1.0087011 0.333930389 0.274902329 693.4544943 451885.4495 0.079813406 0.103036659 5.98E-07 6.223106121 -0.374877812 TPQASTYSYETSDLCYTAEKKS(ph)PSEAR ddPTM_A459_MK2206_30min_R1 2 TPQASTYSYETSDLCYTAEKKSPSEAR 27 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPQASTYSY(0.001)ET(0.002)S(0.005)DLCY(0.026)T(0.011)AEKKS(0.794)PS(0.161)EAR;TPQAST(0.001)Y(0.001)S(0.001)Y(0.004)ET(0.012)S(0.03)DLCY(0.158)T(0.072)AEKKS(0.655)PS(0.066)EAR 82.042 9.96E-05 38080000 679.64 1118.97 1070.33 1151.88 924.87 773.46 697.04 1152.42 504.18 305.63 TRUE FALSE 621.8330491 1046.12485 997.6789817 1240.597997 888.0304695 817.2526368 650.5417334 1142.344513 556.5913152 343.4937518 1.810318371 3.045542588 2.904504016 3.611704698 2.585288567 2.379235816 1.893896847 3.325663153 1.620382648 1 8.424140046 -8.864688091 0.635664383 0.94890406 2.785435943 0.447401985 0.585312849 1.239162144 0.974034831 0.662268663 0.241320118 1.37E-09 8.864688091 1.836531883 TPQASTYSYETSDLCYTAEKKS(ph)PSEAR ddPTM_A459_MK2206_30min_R2 1 TPQASTYSYETSDLCYTAEKKSPSEAR 27 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPQASTYS(0.001)Y(0.002)ET(0.006)S(0.006)DLCY(0.103)T(0.047)AEKKS(0.777)PS(0.058)EAR 67.793 0.0011013 37267000 10521 35346 24205 31272 51312 35293 38966 24254 51264 22172 TRUE FALSE 11326.49585 33590.76904 25011.98262 28716.97757 49297.23306 36636.09985 33849.71739 27424.08108 55722.85006 21448.52946 0.528077968 1.566110586 1.166139743 1.338878622 2.298396874 1.708093784 1.578183598 1.278599595 2.597979977 1 14.38859112 -4.637536661 0.887805389 1.71450032 3.05E-11 0.307756785 0.476321466 3.611112462 1.873699861 0.162934798 6.404054412 2.30E-05 4.637536661 -1.71450032 TPQASTYSYETSDLCYTAEKKSPS(ph)EAR ddPTM_A459_MK2206_30min_R2 1 TPQASTYSYETSDLCYTAEKKSPSEAR 27 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPQASTYS(0.001)Y(0.052)ET(0.192)S(0.151)DLCY(0.135)T(0.054)AEKKS(0.173)PS(0.241)EAR 54.985 0.0038712 147800000 8988.1 29517 18467 26607 31064 21766 35265 15217 29390 19707 TRUE FALSE 9676.235847 28051.2287 19082.68056 24433.12299 29844.27128 22594.32038 30634.66314 17205.91415 31946.28908 19063.9622 0.507566882 1.471426999 1.000981871 1.28163929 1.565481035 1.185184913 1.606941034 0.902536103 1.675742363 1 14.21856038 -4.753823396 24.9962162 1.300392666 0.507565465 0.450932739 0.26195057 238.4652088 782596.0865 0.059672051 0.61986732 1.76E-05 4.753823396 -0.792827201 TPQEAIMDGTEIAVS(ph)PR ddPTM_A459_MK2206_30min_R1 3 TPQEAIMDGTEIAVSPR 17 0 Q06587 Q06587 RING1 E3 ubiquitin-protein ligase RING1 1 TPQEAIMDGT(0.006)EIAVS(0.994)PR;TPQEAIMDGTEIAVS(1)PR;TPQEAIMDGTEIAVS(1)PR 218.88 7.79E-12 24861100 2580.81 2674.91 2592.73 2471.15 3505.14 2686.82 2666.24 2839.73 2330.22 1794.47 TRUE FALSE 2361.298557 2500.772873 2416.742711 2661.478401 3365.522852 2838.945426 2488.379994 2814.90254 2572.454708 2016.782491 1.170824602 1.239981448 1.198315992 1.319665563 1.668758464 1.407660687 1.233836572 1.395739279 1.275524118 1 10.97783978 -3.72325757 15.13054627 1.310968838 1.278087706 0 0.16908637 0 0 0.039546722 0 0.000189122 3.72325757 -0.032881132 TPQEAIMDGTEIAVS(ph)PR ddPTM_A459_MK2206_30min_R2 4 TPQEAIMDGTEIAVSPR 17 0 Q06587 Q06587 RING1 E3 ubiquitin-protein ligase RING1 1 TPQEAIMDGTEIAVS(1)PR;TPQEAIMDGTEIAVS(1)PR;TPQEAIMDGTEIAVS(1)PR;TPQEAIMDGT(0.002)EIAVS(0.998)PR 147.17 0.00039875 13699200 20681.6 22595.7 23298.2 28039 22842.9 29120.2 25395 20070 21031.3 21188.7 TRUE FALSE 22264.9992 21473.6304 24074.95036 25748.12401 21945.97297 30228.38962 22060.606 22693.21791 22860.56446 20497.31445 1.086239822 1.047631408 1.17454169 1.25617061 1.070675528 1.474748786 1.076268115 1.107131276 1.115295592 1 14.32314728 -8.457397131 1.204517005 1.007031604 1.173047801 0.153146971 0.119390487 0.919362546 2.908272917 0.114966194 0.036176193 3.49E-09 8.457397131 0.166016197 TPQEAITDGLEIVVS(ph)PR ddPTM_A459_MK2206_30min_R1 2 TPQEAITDGLEIVVSPR 17 0 X6RFN3;Q99496-2;Q99496 X6RFN3 RNF2 E3 ubiquitin-protein ligase RING2 1 TPQEAIT(0.002)DGLEIVVS(0.998)PR;TPQEAIT(0.002)DGLEIVVS(0.998)PR 136.61 0.00051355 5055500 1089.67 873.74 1127.26 909.99 1041.63 996.12 1164.86 879.93 708.7 815.83 TRUE FALSE 996.9878444 816.8593672 1050.744732 980.0775875 1000.139671 1052.519454 1087.154315 872.2368648 782.3719011 916.9011796 1.087344925 0.890891391 1.145973803 1.06890209 1.090782402 1.147909368 1.185683189 0.951287755 0.853278323 1 9.840622443 -7.915072747 7.471478144 0.918711341 1.084181855 0.425824121 0.081707774 0.213998739 15.86640294 0.046511667 0.022179953 1.22E-08 7.915072747 0.165470514 TPQGPVSATVEVS(ph)SPTGFAQSQVLEDVSQAAR ddPTM_A459_MK2206_30min_R1 2 TPQGPVSATVEVSSPTGFAQSQVLEDVSQAAR 32 0 O15061;A0A075B7B1;O15061-2;H0YL34 O15061 SYNM Synemin 1 TPQGPVSAT(0.001)VEVS(0.876)S(0.122)PTGFAQSQVLEDVSQAAR;TPQGPVSATVEVS(0.642)S(0.358)PT(0.001)GFAQSQVLEDVSQAAR 191.48 6.55E-41 46051000 2574.3 2563.33 2617.88 2042.1 2811.6 2208.49 2831.85 2208 1878.07 1954.43 TRUE FALSE 2355.342267 2396.456751 2440.185599 2199.382896 2699.608018 2333.532795 2642.942454 2188.695689 2073.302097 2196.559544 1.072287011 1.091004684 1.110912566 1.001285352 1.229016544 1.062358087 1.203219126 0.996419922 0.943886135 1 11.10102989 -7.922247751 8.412294749 0.971352302 1.107727953 0.470062758 0.063521989 0.211589659 20.19438546 0.033236225 0.015900821 1.20E-08 7.922247751 0.136375651 TPQGPVSATVEVS(ph)SPTGFAQSQVLEDVSQAAR ddPTM_A459_MK2206_30min_R2 3 TPQGPVSATVEVSSPTGFAQSQVLEDVSQAAR 32 0 O15061;A0A075B7B1;O15061-2;H0YL34 O15061 SYNM Synemin 1 TPQGPVSATVEVS(0.6)S(0.389)PT(0.011)GFAQSQVLEDVSQAAR;TPQGPVSATVEVS(0.625)S(0.365)PT(0.01)GFAQSQVLEDVSQAAR;TPQGPVSAT(0.002)VEVS(0.585)S(0.367)PT(0.047)GFAQSQVLEDVSQAAR 157.73 7.82E-24 18567800 18290.4 31579.8 26113.2 30196 28433.8 22590.9 27955.6 19448.4 22924.9 21313.8 TRUE FALSE 19690.72709 30011.59305 26983.80105 27728.89021 27317.34614 23450.61253 24284.99614 21990.37266 24918.86636 20618.33245 0.955010651 1.455578094 1.308728585 1.344865802 1.324905698 1.137367078 1.177835123 1.066544674 1.208578163 1 14.33164004 -6.782299753 11.2081084 1.125867915 1.293133997 0.264084884 0.131787596 0.679064696 358.4482431 0.044142494 0.039460188 1.65E-07 6.782299753 0.167266082 TPQGPVSATVEVSS(ph)PTGFAQSQVLEDVSQAAR ddPTM_A459_MK2206_30min_R2 1 TPQGPVSATVEVSSPTGFAQSQVLEDVSQAAR 32 0 O15061;A0A075B7B1;O15061-2;H0YL34 O15061 SYNM Synemin 1 TPQGPVSATVEVS(0.218)S(0.565)PT(0.218)GFAQSQVLEDVSQAAR 108.08 5.43E-12 6050800 10723 13442 12386 11823 13539 15493 12810 10372 11190 12842 TRUE FALSE 11543.96112 12774.48983 12798.94306 10857.02308 13007.39083 16082.59697 11128.03161 11727.65601 12163.28597 12422.96659 0.929243514 1.028296239 1.030264628 0.8739477 1.047043855 1.294585867 0.895762822 0.94403023 0.979096731 1 13.60072211 TPQNVPAS(ph)PGGDR ddPTM_A459_MK2206_30min_R2 2 TPQNVPASPGGDR 13 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 TPQNVPAS(1)PGGDR;TPQNVPAS(1)PGGDR 118.2 0.0034685 18944600 38358 57484 48913 57323 56611 100733 47400 38249.1 76557 40222 TRUE FALSE 41294.71797 54629.42815 50543.73501 52639.52753 54388.16769 104566.4649 41176.32306 43248.3887 83215.78948 38909.55943 1.061300065 1.404010453 1.299005585 1.352868763 1.397809908 2.687423513 1.058257242 1.111510624 2.138697808 1 15.24783702 -6.537545783 24.99829119 1.624592513 1.300327757 0.084656466 0.493828422 636.6388688 1085071.032 0.163085787 0.163144804 2.90E-07 6.537545783 -0.324264756 TPQS(ph)PAPCVLLR ddPTM_A459_MK2206_30min_R1 2 TPQSPAPCVLLR 12 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 T(0.001)PQS(0.999)PAPCVLLR;T(0.294)PQS(0.706)PAPCVLLR 162.67 3.94E-05 20145000 4167.2 4213.9 3470.4 2830.7 3269.7 2848.5 3217.8 2739.5 2734.5 2133.42 TRUE FALSE 3812.757757 3939.574344 3234.838917 3048.721004 3139.460925 3009.779608 3003.146433 2715.54884 3018.761061 2397.724176 1.590156948 1.643047346 1.349128874 1.271506137 1.309350323 1.255265155 1.252498708 1.132552638 1.259010978 1 11.22744999 -1.522878745 0.225574859 1.067427063 4.308752849 0.840092043 0.072507306 18.91956137 0.245164148 0.109459978 22.50100719 0.03 1.522878745 3.241325786 TPS(ph)DDEEDNLFAPPK ddPTM_A459_MK2206_30min_R1 2 TPSDDEEDNLFAPPK 15 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 T(0.261)PS(0.739)DDEEDNLFAPPK;T(0.036)PS(0.964)DDEEDNLFAPPK 146.59 0.00034057 9202900 2758.65 2754.31 2876.92 2252.95 2192.46 1922.74 2945.85 2551.42 2872.94 2575.66 TRUE FALSE 2524.012331 2575.003918 2681.642686 2426.472599 2105.129676 2031.603877 2749.337722 2529.113204 3171.592394 2894.752206 0.871926905 0.889542087 0.926380738 0.83823154 0.727222755 0.701823069 0.949766172 0.873689015 1.095635194 1 11.49922414 -8.01631275 1.975939273 1.043114893 0.835083622 0.498557645 0.078978988 0.312804831 2.216422386 0.072663026 0.024043595 9.63E-09 8.01631275 -0.208031271 TPS(ph)DDEEDNLFAPPK ddPTM_A459_MK2206_30min_R2 4 TPSDDEEDNLFAPPK 15 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;F8W7U3;Q641Q2-2;Q641Q2;E7ESD2 A0A0A0MR88;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 T(0.041)PS(0.959)DDEEDNLFAPPK;T(0.011)PS(0.989)DDEEDNLFAPPK;T(0.035)PS(0.965)DDEEDNLFAPPK;T(0.288)PS(0.712)DDEEDNLFAPPK 163.9 9.93E-05 7571400 44495 51779 46181.9 49733 49633 43655.5 54392 43656 36137.6 50890 TRUE FALSE 47901.57141 49207.73015 47721.5815 45669.65481 47684.15903 45316.84064 47250.26506 49361.98909 39280.78313 49229.46347 0.973026477 0.99955853 0.969370335 0.927689469 0.968610171 0.920522741 0.959796466 1.002691998 0.797912071 1 15.5872344 -5.574713776 4.901568156 0.941117382 0.986108321 0.110344716 0.05462582 0.421607452 21.670716 0.01421501 0.02579707 2.66E-06 5.574713776 0.044990939 TPS(ph)EADRWLEEVSK ddPTM_A459_MK2206_30min_R1 1 TPSEADRWLEEVSK 14 1 G3V3Z8;P49757-3;P49757;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5;P49757-4;P49757-2 G3V3Z8 NUMB Protein numb homolog 1 T(0.452)PS(0.548)EADRWLEEVSK 62.589 0.044788 8182400 2545.1 2667.4 2748.7 2622.3 2380.3 2128.3 2310.1 2466.3 2071.5 2151.9 TRUE FALSE 2328.62588 2493.751775 2562.125902 2824.27 2285.487611 2248.802507 2155.997444 2444.737399 2286.839838 2418.493618 0.962841441 1.031117782 1.059389152 1.16778063 0.945004607 0.929836031 0.891462945 1.010851292 0.945563726 1 11.23989302 -6.384605913 18.84515734 0.949992098 1.054226145 0.435772804 0.05647134 2.811314809 418.1338196 0.018100745 0.02052425 4.12E-07 6.384605913 0.104234047 TPS(ph)FELPDASERPPTYCELVPR ddPTM_A459_MK2206_30min_R2 2 TPSFELPDASERPPTYCELVPR 22 1 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 T(0.155)PS(0.666)FELPDAS(0.145)ERPPT(0.018)Y(0.016)CELVPR;T(0.464)PS(0.533)FELPDAS(0.003)ERPPTYCELVPR 55.588 0.013818 24461000 11204 10686.7 11714.8 9798.2 9758.1 9056.7 11205 11596 7978.2 13374.6 TRUE FALSE 12061.78685 10156.01402 12105.36559 8997.655717 9374.947963 9401.359065 9733.77004 13111.63702 8672.129415 12938.1879 0.932262458 0.784964177 0.935630683 0.695433997 0.724595132 0.726636461 0.752328697 1.013405982 0.670273881 1 13.65934795 -9.921564872 11.57184158 0.999999997 0.804105575 0.220035752 0.110734253 0 0 0.105457212 0.025577131 1.20E-10 9.921564872 -0.195894423 TPS(ph)IQPSLLPHAAPFAK ddPTM_A459_MK2206_30min_R1 2 TPSIQPSLLPHAAPFAK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;H0YF36 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 T(0.152)PS(0.847)IQPSLLPHAAPFAK;T(0.091)PS(0.909)IQPSLLPHAAPFAK 123.61 0.00088847 40703000 12065.1 4162.8 7437.5 4585.6 10434.4 7650.8 8708 9168.7 4883.4 4468 TRUE FALSE 11038.89989 3891.800963 6932.663222 4938.783707 10018.77575 8083.981684 8127.105209 9088.539023 5391.046905 5021.529572 2.198314225 0.77502301 1.380587951 0.983521781 1.995164145 1.609864399 1.618452126 1.809914468 1.073586609 1 12.29391116 -6.245944354 24.97211923 1.567958849 1.297710899 0.029252833 0.447460192 2228.196715 3591009.814 0.125388636 0.161285231 5.68E-07 6.245944354 -0.27024795 TPS(ph)IQPSLLPHAAPFAK ddPTM_A459_MK2206_30min_R2 2 TPSIQPSLLPHAAPFAK 17 0 P35658-4;P35658-3;A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;H0YF36 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 T(0.136)PS(0.864)IQPSLLPHAAPFAK;T(0.014)PS(0.986)IQPSLLPHAAPFAK 150.69 0.00016281 59381000 80915 117163 105375 157241 146590 143983 135933 88057 94813 111848 TRUE FALSE 87109.91461 111344.8558 108888.1499 144393.9073 140834.14 149462.374 118084.8338 99566.35224 103059.6634 108198.4089 0.805094229 1.029080343 1.006374779 1.334528934 1.301628568 1.381373122 1.091373108 0.920220114 0.952506274 1 16.72331976 -7.628730874 5.136685904 0.954530693 1.154078768 0.20067032 0.16402415 0.358274624 14.80985381 0.08936079 0.050189298 2.35E-08 7.628730874 0.199548075 TPS(ph)LKDSPAGR ddPTM_A459_MK2206_30min_R1 1 TPSLKDSPAGR 11 1 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 T(0.19)PS(0.81)LKDSPAGR 126.34 0.015079 7127200 1178.8 1689.4 1712.5 1543.7 1297.7 1206.1 1420.8 1121.9 986.55 1139.7 TRUE FALSE 1078.53687 1579.419753 1596.260271 1662.596041 1246.009861 1274.38834 1326.021024 1112.091347 1089.105403 1280.89464 0.842018411 1.23305985 1.246207316 1.297995939 0.972765302 0.994920503 1.035230364 0.868214537 0.850269311 1 10.3229361 -6.382507782 7.033935326 0.951019729 1.166433067 0.37462561 0.127239631 0.274883735 14.72077538 0.040899291 0.046366606 4.14E-07 6.382507782 0.215413338 TPS(ph)PAAEDAREPEAK ddPTM_A459_MK2206_30min_R2 1 TPSPAAEDAREPEAK 15 1 Q92797 Q92797 SYMPK Symplekin 1 T(0.407)PS(0.593)PAAEDAREPEAK 77.795 0.018808 200010000 113510 103280 104760 114710 115840 94131 135810 92487 89271 102260 TRUE FALSE 122200.4129 98151.26538 108252.6461 105337.8261 111291.5396 97713.22117 117977.9839 104575.3685 97035.63021 98923.26457 1.235305096 0.992195979 1.094309277 1.064843811 1.125028981 0.987767858 1.192621214 1.057136245 0.980918196 1 16.59402223 -6.485737206 0.012891915 1.03E-06 2.159989543 0.183351896 0.07653815 3582.043385 15.05476449 1206.246188 1315.082049 3.27E-07 6.485737206 2.159988518 TPS(ph)PEPVDKDFYSEFGNK ddPTM_A459_MK2206_30min_R2 1 TPSPEPVDKDFYSEFGNK 18 1 Q9Y2I1-2;Q9Y2I1 Q9Y2I1-2 NISCH Nischarin 1 T(0.095)PS(0.905)PEPVDKDFYSEFGNK 56.149 0.035719 3340200 9457.1 12473 9366.9 12170 12401 10890 11852 14402 10687 11329 TRUE FALSE 10181.14285 11853.60896 9679.187771 11175.67207 11914.07443 11304.42658 10295.81816 16284.39085 11616.53594 10959.33566 0.928992702 1.081599225 0.883191105 1.01973992 1.087116482 1.031488307 0.939456413 1.485892152 1.059967165 1 13.41987273 TPS(ph)PPPPIPEDIALGK ddPTM_A459_MK2206_30min_R2 1 TPSPPPPIPEDIALGK 16 0 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.031)PS(0.969)PPPPIPEDIALGK 112.12 0.0025021 2599200 17771 25412 22599 23829 26812 22535 24314 17775 22838 20171 TRUE FALSE 19131.56142 24150.07703 23352.43938 21882.09447 25759.22616 23392.58522 21121.54259 20098.25353 24824.40796 19512.82192 0.980461027 1.23765169 1.196774074 1.121421318 1.320117934 1.198831482 1.082444286 1.030002406 1.27221004 1 14.25213481 -10.54839671 5.2323547 0.99999871 1.161970175 0.181413778 0.101877839 1.52E-06 2.84E-07 0.097969731 0.023760961 2.83E-11 10.54839671 0.161971465 TPS(ph)PPPPIPEDIALGKK ddPTM_A459_MK2206_30min_R1 1 TPSPPPPIPEDIALGKK 17 1 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.111)PS(0.889)PPPPIPEDIALGKK 104.45 0.0014247 7763500 1207.9 1107 1282.4 1156 1234.9 1036.5 1020.7 1065.3 810.41 553.25 TRUE FALSE 1105.161762 1034.934099 1195.354261 1245.03532 1185.711318 1095.185734 952.6109654 1055.986194 894.6550196 621.7907868 1.777385232 1.664441032 1.922438039 2.002338 1.906929699 1.761341206 1.532044195 1.698298233 1.438836082 1 9.28028543 -8.600436658 0.629171373 0.992509814 1.852809314 0.84138212 0.110685903 0.379302045 0.340960743 0.12836476 0.052686676 2.51E-09 8.600436658 0.8602995 TPS(ph)PSPPCSSSPSPSGR ddPTM_A459_MK2206_30min_R1 1 TPSPSPPCSSSPSPSGR 17 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 T(0.011)PS(0.977)PS(0.012)PPCSSSPSPSGR 170.78 8.09E-07 4817600 973.46 687.08 834.66 755.01 642.29 589.19 944.25 938.58 396.78 771.26 TRUE FALSE 890.6621152 642.3509671 778.0056047 813.161001 616.7062292 622.5494286 881.2608054 930.374094 438.0267009 866.8095115 1.027517699 0.741052052 0.897550839 0.938108074 0.711466846 0.718207888 1.016671822 1.073331662 0.505332135 1 9.759571174 -10.1827741 15.24972699 0.999992497 0.852473714 0.067280722 0.169285898 0 0 0.159003388 0.038563986 6.56E-11 10.1827741 -0.147518783 TPS(ph)PSPPCSSSPSPSGR ddPTM_A459_MK2206_30min_R2 1 TPSPSPPCSSSPSPSGR 17 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 T(0.004)PS(0.983)PS(0.014)PPCSSSPSPSGR 113.67 0.0017927 9297200 14627 12054 16254 15978 16885 13810 15343 19329 14015 19229 TRUE FALSE 15746.85437 11455.41589 16795.90025 14672.54629 16222.01006 14335.54923 13328.44567 21855.36667 15233.99937 18601.5593 0.846534105 0.615830947 0.902929694 0.788780448 0.872077969 0.770663846 0.716523032 1.174921215 0.818963567 1 14.18313594 -7.74216888 24.99998976 0.997706911 0.788088566 0.432085455 0.110506323 206.2486342 267570.957 0.04906622 0.028273663 1.81E-08 7.74216888 -0.209618346 TPS(ph)SEEISPTK ddPTM_A459_MK2206_30min_R1 1 TPSSEEISPTK 11 0 J3QLT3;E7ENF8;A0A1W2PRI7;Q15311 J3QLT3 RALBP1 RalA-binding protein 1 1 T(0.468)PS(0.514)S(0.018)EEISPTK 136.93 0.0013747 20025000 1334.5 1350.4 1354.2 1172 1328.9 1261.4 1354.9 1186.5 1606.6 1670.7 TRUE FALSE 1220.993767 1262.488715 1262.280677 1262.267643 1275.967099 1332.819378 1264.517093 1176.126556 1773.611819 1877.678929 0.650267598 0.672366662 0.672255867 0.672248926 0.679544878 0.709822834 0.673446921 0.626372559 0.944576728 1 10.87473468 -8.325798646 4.990991218 0.989112983 0.671599349 0.96661488 0.022540163 0.035027615 1.688110424 0.021618123 0.005752915 4.72E-09 8.325798646 -0.317513634 TPS(ph)SEEISPTK ddPTM_A459_MK2206_30min_R2 2 TPSSEEISPTK 11 0 J3QLT3;E7ENF8;A0A1W2PRI7;Q15311 J3QLT3 RALBP1 RalA-binding protein 1 1 T(0.411)PS(0.477)S(0.111)EEISPTK;T(0.332)PS(0.333)S(0.333)EEIS(0.002)PTK 153.75 0.00055505 94855000 296737 277141 220983 277904 219650 192774 309920 223598 163216 276069 TRUE FALSE 319455.4129 263378.5809 228350.4629 255198.3542 211025.4373 200110.1497 269227.1317 252823.0263 177412.2327 267060.8911 1.196189421 0.986211721 0.85505018 0.955581153 0.790177238 0.749305332 1.008111411 0.946686822 0.66431379 1 18.0268092 -4.691754451 1.633993861 0.867415891 1.372610626 0.466450847 0.106393686 1.133029468 2.490897839 0.02936718 0.97663728 2.03E-05 4.691754451 0.505194734 TPS(ph)SEEISPTKFPGLYR ddPTM_A459_MK2206_30min_R2 1 TPSSEEISPTKFPGLYR 17 1 J3QLT3;E7ENF8;A0A1W2PRI7;Q15311 J3QLT3 RALBP1 RalA-binding protein 1 1 T(0.308)PS(0.56)S(0.132)EEISPTKFPGLYR 89.911 0.0050987 41506000 17116 31217 27710 27417 30349 17484 27925 14446 29148 25735 TRUE FALSE 18426.41412 29666.80917 28633.83757 25176.9434 29157.34577 18149.36587 24258.41396 16334.1418 31683.24035 24895.26906 0.740157259 1.191664533 1.150171846 1.011314372 1.171200267 0.729028709 0.974418629 0.656114291 1.272661094 1 14.60358399 -6.744222039 24.99640672 0.907949994 1.063704167 0.089330321 0.19600328 501.0399599 727416.4206 0.061405983 0.061263635 1.80E-07 6.744222039 0.155754173 TPS(ph)SPCPASK ddPTM_A459_MK2206_30min_R2 1 TPSSPCPASK 10 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 T(0.079)PS(0.671)S(0.249)PCPASK 95.094 0.023134 33968000 84820 91044 85399 85988 94865 82669 97998 79225 74204 96717 TRUE FALSE 91313.88442 86522.88735 88246.16004 78962.50534 91140.12344 85815.02672 85130.74488 89579.97952 80658.12979 93561.13221 0.975980968 0.924773838 0.94319252 0.843966971 0.974123776 0.917208083 0.909894343 0.957448648 0.862090142 1 16.5136217 TPS(ph)SPLQSCTPSLSPR ddPTM_A459_MK2206_30min_R1 2 TPSSPLQSCTPSLSPR 16 0 R4GNJ5;A0A590TQL1;Q96AP0-2;Q96AP0 R4GNJ5 ACD Adrenocortical dysplasia protein homolog 1 T(0.226)PS(0.475)S(0.299)PLQSCTPSLSPR;T(0.062)PS(0.557)S(0.381)PLQSCTPSLSPR 171.15 8.45E-06 14792700 1974.82 2252.93 2145.4 1706.29 2056.14 1736.19 2075.7 1996.8 1857.7 1706.87 TRUE FALSE 1806.851189 2106.263848 1999.776225 1837.708751 1974.23959 1834.491577 1937.23384 1979.342188 2050.814563 1918.329942 0.941887602 1.097967457 1.042456869 0.957973241 1.029144959 0.956296171 1.009854352 1.031804876 1.069062479 1 10.90563516 -7.803097028 4.649570148 1.038931472 1.007242923 0.070092576 0.04656707 0.568391642 27.03376754 0.026179893 0.012513011 1.57E-08 7.803097028 -0.031688549 TPS(ph)SQNLLALLAR ddPTM_A459_MK2206_30min_R1 1 TPSSQNLLALLAR 13 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 T(0.042)PS(0.941)S(0.018)QNLLALLAR 166.64 0.00032671 13185000 814.11 793.06 801.4 666.52 648.1 652.99 1221.1 847.48 852.73 739.47 TRUE FALSE 744.8656694 741.4316499 747.0032008 717.8554859 622.2848046 689.9617295 1139.642647 840.0705717 941.374335 831.0811263 0.896261082 0.892129091 0.898833071 0.863761025 0.748765415 0.830197808 1.371277257 1.010816568 1.13271052 1 9.698845503 -7.224182228 24.99997498 1.129602539 0.854242271 0.628429434 0.103105156 357.0523121 239586.4795 0.038414382 0.029755028 5.97E-08 7.224182228 -0.275360268 TPS(ph)SQNLLALLAR ddPTM_A459_MK2206_30min_R2 2 TPSSQNLLALLAR 13 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 T(0.281)PS(0.718)S(0.001)QNLLALLAR;T(0.078)PS(0.902)S(0.02)QNLLALLAR 175.27 0.00010173 73986000 24597.8 52900 49021 50745 51602 47452 71267 47413 37739 53749 TRUE FALSE 26481.02648 50273.06292 50655.33567 46598.97117 49575.8462 49257.81911 61909.55729 53610.04189 41021.47 51995.17453 0.509297771 0.966879396 0.974231477 0.896217228 0.953470137 0.947353664 1.190678901 1.031058024 0.788947635 1 15.66609012 -4.761373414 6.959456662 0.97688289 0.499060815 0.67577642 0.096141501 0.066996519 18.45217191 0.024794289 0.151249079 1.73E-05 4.761373414 -0.477822075 TPS(ph)TASLTGTPPTASLTR ddPTM_A459_MK2206_30min_R1 2 TPSTASLTGTPPTASLTR 18 0 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 T(0.19)PS(0.805)T(0.005)ASLTGTPPTASLTR;T(0.059)PS(0.907)T(0.033)ASLTGTPPTASLTR 137.73 0.00034065 7702100 1334.68 1223.82 1389.47 1132.38 1439.12 1167.81 1056.36 1294.63 955.24 932.86 TRUE FALSE 1221.158457 1144.149096 1295.156648 1219.596104 1381.796803 1233.930393 985.8921518 1283.311186 1054.540616 1048.42974 1.164749922 1.091297826 1.23532994 1.163259738 1.317967958 1.176931888 0.940351189 1.224031652 1.005828599 1 10.03401447 -8.277793846 22.892453 1.00291409 1.162229957 0.321235659 0.093765392 387.5759837 542500.9801 0.091639402 0.024053416 5.27E-09 8.277793846 0.159315867 TPS(ph)TEAAHIMLR ddPTM_A459_MK2206_30min_R2 1 TPSTEAAHIMLR 12 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 T(0.049)PS(0.544)T(0.406)EAAHIMLR 79.885 0.027249 2956100 9510.1 9697.4 10371 9977.8 9799.6 10789 11234 7736.8 6958 10058 TRUE FALSE 10238.20057 9215.841217 10716.76396 9162.581823 9414.818465 11199.58296 9758.962306 8748.026324 7563.194263 9729.808284 1.052251007 0.947176034 1.101436293 0.941702196 0.967626308 1.151058955 1.002996361 0.899095447 0.777322023 1 13.24819566 -7.768969731 4.35707662 0.874622932 1.024150469 0.359827661 0.080135798 0.200058879 8.972971543 0.042835598 0.021164685 1.70E-08 7.768969731 0.149527538 TPS(ph)TPVACSTPAQLK ddPTM_A459_MK2206_30min_R2 2 TPSTPVACSTPAQLK 15 0 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 T(0.229)PS(0.476)T(0.294)PVACSTPAQLK;T(0.001)PS(0.783)T(0.217)PVACSTPAQLK 249.58 5.39E-28 50086000 102912 93242 95301 101636 96420 85725 108639 85605 75914 104496 TRUE FALSE 110791.0218 88611.73787 98478.28777 93332.01368 92634.06633 88987.32495 94374.5688 96793.86743 82516.8625 101086.3041 1.096004279 0.876594893 0.974200102 0.923290396 0.916385926 0.880310402 0.933603911 0.957536912 0.816301113 1 16.62522802 -4.752853157 24.99838644 0.919374956 1.096004612 0.526087261 0.050169371 247.957912 721863.4461 0.011630149 0.132844876 1.77E-05 4.752853157 0.176629656 TPS(ph)TVTLNNNSAPANR ddPTM_A459_MK2206_30min_R2 1 TPSTVTLNNNSAPANR 16 0 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2;Q9ULH0-5 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 T(0.097)PS(0.869)T(0.032)VT(0.002)LNNNSAPANR 124.04 0.0011167 0 10705 10219 9310 10301 9693 14434 11447 8957.4 13420 12101 TRUE FALSE 11524.58303 9711.53932 9620.390753 9459.375349 9312.404117 14983.29598 9943.99515 10128.16294 14587.24734 11706.14536 0.984489999 0.829610347 0.821823961 0.808069186 0.795514136 1.279951301 0.849467937 0.86520051 1.24611876 1 13.51497848 TPSKPPAQLS(ph)PSVPK ddPTM_A459_MK2206_30min_R1 1 TPSKPPAQLSPSVPK 15 1 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TPSKPPAQLS(0.654)PS(0.346)VPK 90.442 0.0085579 6471200 2571.5 2763 2338.7 1953.7 2183.4 2146.9 2098.7 1800.1 2355 2462.5 TRUE FALSE 2352.780422 2583.128198 2179.95556 2104.174313 2096.430555 2268.455623 1958.699552 1784.361915 2599.810677 2767.573091 0.850124042 0.933355006 0.787677683 0.760295842 0.75749781 0.819655181 0.707731824 0.644738859 0.939382843 1 11.4344057 -5.279410699 21.78607509 0.783602087 0.89173948 0.090033669 0.101064209 237.6455447 288091.8833 0.025104917 0.0525438 5.26E-06 5.279410699 0.108137393 TPSKPPAQLS(ph)PSVPK ddPTM_A459_MK2206_30min_R2 1 TPSKPPAQLSPSVPK 15 1 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 T(0.001)PS(0.003)KPPAQLS(0.786)PS(0.211)VPK 64.203 0.038258 11089000 51776 49214 43603 43951 42073 37401 51122 38442 36630 55006 TRUE FALSE 55740.01037 46770.10432 45056.70226 40360.06271 40421.00262 38824.32126 44409.61999 43466.50139 39816.01119 53211.15872 1.047524837 0.878952939 0.846752887 0.758488702 0.759633949 0.729627435 0.834592237 0.816868161 0.748264314 1 15.6994412 -4.623895098 1.421113023 0.796876716 1.225024499 0.479933751 0.073703178 1.368300032 1.916199329 0.019936964 0.930108528 2.38E-05 4.623895098 0.428147783 TPSNGAEGLT(ph)PR ddPTM_A459_MK2206_30min_R2 1 TPSNGAEGLTPR 12 0 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 TPSNGAEGLT(1)PR 116.58 0.011641 22629000 40559 53463 53194 59032 53525 63561 57901 49175 48683 45745 TRUE FALSE 43664.22822 50808.10516 54967.46141 54208.89677 51423.33956 65979.85839 50298.52915 55602.34134 52917.35934 44252.3444 0.986709943 1.148144937 1.242136708 1.224994913 1.162047802 1.490991252 1.136629705 1.256483517 1.195809173 1 15.43346627 -4.799032707 2.234758812 1.228628443 0.929528715 0.249047463 0.116742389 0.762022905 4.629156015 0.029369484 0.452739199 1.59E-05 4.799032707 -0.299099728 TPSNTPSAEADWS(ph)PGLELHPDYK ddPTM_A459_MK2206_30min_R1 4 TPSNTPSAEADWSPGLELHPDYK 23 0 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3;A0A2R8Y7R5;A0A2R8Y755;A0A2R8Y586;A0A2R8YF51;A0A2R8Y5D2;A0A2R8YCS7 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 TPSNTPSAEADWS(1)PGLELHPDYK;TPSNT(0.002)PS(0.003)AEADWS(0.995)PGLELHPDYK;TPSNTPSAEADWS(1)PGLELHPDYK;T(0.001)PS(0.001)NT(0.001)PS(0.004)AEADWS(0.994)PGLELHPDYK 147.8 7.78E-08 155740000 16190.63 17428 17901.41 15102.15 16575.84 15723.02 17407.45 16383.22 16231.06 13638.15 TRUE FALSE 14813.5319 16293.43403 16686.31217 16265.32021 15915.58919 16613.2438 16246.23077 16239.98323 17918.33677 15327.74698 0.966452011 1.063002544 1.088634369 1.061168365 1.038351508 1.083867304 1.059922948 1.059515352 1.169013084 1 13.90385803 -4.763823169 4.885096646 1.071174762 0.959521117 0.365916239 0.04067634 0.184790488 11.14973037 0.009627854 0.071207497 1.72E-05 4.763823169 -0.111653645 TPSNTPSAEADWS(ph)PGLELHPDYK ddPTM_A459_MK2206_30min_R2 5 TPSNTPSAEADWSPGLELHPDYK 23 0 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3;A0A2R8Y7R5;A0A2R8Y755;A0A2R8Y586;A0A2R8YF51;A0A2R8Y5D2;A0A2R8YCS7 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 T(0.093)PS(0.093)NT(0.082)PS(0.179)AEADWS(0.55)PGLELHPDY(0.004)K;T(0.003)PS(0.014)NT(0.04)PS(0.123)AEADWS(0.82)PGLELHPDYK;TPSNTPS(0.001)AEADWS(0.998)PGLELHPDYK;TPS(0.001)NT(0.002)PS(0.005)AEADWS(0.992)PGLELHPDYK;TPSNT(0.003)PS(0.006)AEADWS(0.991)PGLELHPDYK 98.225 4.03E-05 74141800 156498 176397 170270 194423 180483 158197 200033 158971 145208 187048 TRUE FALSE 168479.6072 167637.3815 175946.7168 178538.019 173396.3306 164217.2977 173768.4268 179749.0555 157837.9294 180944.6391 0.93111135 0.926456746 0.972378722 0.986699688 0.958283879 0.907555474 0.960340288 0.993392545 0.872299562 1 17.46518884 TPSPKEEDEEPES(ph)PPEK ddPTM_A459_MK2206_30min_R1 4 TPSPKEEDEEPESPPEK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TPSPKEEDEEPES(1)PPEK;TPSPKEEDEEPES(1)PPEK;TPSPKEEDEEPES(1)PPEK;TPSPKEEDEEPES(1)PPEK 132.01 0.00040668 152301000 29823.5 33540.3 34307.3 31276.6 25722.9 20335.5 23316.4 27234.8 28224.8 24833 TRUE FALSE 27286.85472 31356.82037 31978.61606 33685.52915 24698.30242 21486.87844 21761.0055 26996.68901 31158.86896 27909.49952 0.977690578 1.123517831 1.145796829 1.206955686 0.884942505 0.769876881 0.779698879 0.967293914 1.116425214 1 14.76846863 -6.273772097 24.71667661 0.90357908 1.116514102 0.423344439 0.109812635 634.1249804 1270881.658 0.036767517 0.041991992 5.32E-07 6.273772097 0.212935022 TPSPKEEDEEPES(ph)PPEK ddPTM_A459_MK2206_30min_R2 3 TPSPKEEDEEPESPPEK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TPSPKEEDEEPES(1)PPEK;TPSPKEEDEEPES(1)PPEK;TPSPKEEDEEPES(1)PPEK 128.29 0.00056433 111701000 363818 441104 425029 391501 420375 280841 478381 378317 360573 458195 TRUE FALSE 391672.1858 419199.4168 439199.2547 359514.116 403868.9653 291528.601 415569.0001 427764.3309 391934.9878 443244.1347 0.883648886 0.94575288 0.990874375 0.811097289 0.911165955 0.657715643 0.937562322 0.965076123 0.884241792 1 18.75774201 -8.581879619 1.025967192 0.993959616 0.879375051 0.125146783 0.090310309 1.400911108 3.200236399 0.089783386 0.029433513 2.62E-09 8.581879619 -0.114584565 TPSPKEEDEEPES(ph)PPEKK ddPTM_A459_MK2206_30min_R1 4 TPSPKEEDEEPESPPEKK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK 104.35 0.0020749 425581000 20521.7 27803.1 27805.3 26348.6 15282.2 13461.1 15965.7 19956.2 20053.3 16337.9 TRUE FALSE 18776.22165 25993.11314 25917.95371 28377.97374 14673.47761 14223.25585 14900.65728 19781.72505 22137.9123 18361.9624 1.022560729 1.415595598 1.411502384 1.545476084 0.799123607 0.774604345 0.811495905 1.077320856 1.20563978 1 14.16443263 -6.265812522 24.99842959 0.933398724 1.358035886 0.55666532 0.176414154 291.3250002 1665314.963 0.057837813 0.067868096 5.42E-07 6.265812522 0.424637163 TPSPKEEDEEPES(ph)PPEKK ddPTM_A459_MK2206_30min_R2 1 TPSPKEEDEEPESPPEKK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TPSPKEEDEEPES(1)PPEKK 81.696 0.011546 34679000 105590 122170 117140 106910 125960 61488 128100 115230 95300 138830 TRUE FALSE 113674.0516 116103.2155 121045.3891 98175.11101 121014.1775 63827.96893 111280.3161 130290.9566 103589.0217 134299.9885 0.846418923 0.864506518 0.901306028 0.731013548 0.901073625 0.475264143 0.828595128 0.970148681 0.771325619 1 17.03509966 -10.52510338 4.612236275 1.000004241 0.810025421 0.163162237 0.129114119 92435825.81 7.587832338 4663.211752 0.031740196 2.98E-11 10.52510338 -0.18997882 TPSS(ph)EEISPTKFPGLYR ddPTM_A459_MK2206_30min_R2 1 TPSSEEISPTKFPGLYR 17 1 J3QLT3;E7ENF8;A0A1W2PRI7;Q15311 J3QLT3 RALBP1 RalA-binding protein 1 1 T(0.022)PS(0.043)S(0.931)EEIS(0.003)PTKFPGLYR 87.647 0.0057817 19633000 17566 29371 27136 30581 29502 29770 33782 25178 22062 28891 TRUE FALSE 18910.86647 27912.47885 28040.7007 28082.43448 28343.60324 30902.91821 29346.38282 28468.85105 23980.91288 27948.28904 0.676637716 0.998718698 1.003306523 1.004799773 1.014144487 1.105717712 1.050024307 1.018625899 0.858045831 1 14.77047235 -4.760948572 5.753193716 1.012059416 0.662299932 0.739867172 0.058528622 0.073044855 8.448376244 0.015031051 0.101309554 1.73E-05 4.760948572 -0.349759484 TPSS(ph)PCPASK ddPTM_A459_MK2206_30min_R1 2 TPSSPCPASK 10 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 T(0.037)PS(0.333)S(0.629)PCPAS(0.001)K;T(0.252)PS(0.291)S(0.457)PCPASK 108.98 0.010346 63901000 18357.2 17646.8 17632.2 15149.2 17708.9 17472.6 20877.5 20507.4 13458 17897.1 TRUE FALSE 16795.82374 16497.99011 16435.37539 16315.99401 17003.51701 18461.88351 19484.80007 20328.10596 14857.00726 20114.32786 0.835017896 0.820210858 0.817097917 0.811162775 0.845343535 0.917847399 0.968702519 1.01062815 0.738628074 1 14.29593591 -6.722530218 3.277155418 0.932071865 0.821276082 0.344352698 0.070645363 0.27624853 6.101513621 0.024607573 0.023463684 1.89E-07 6.722530218 -0.110795783 TPSS(ph)PCPASK ddPTM_A459_MK2206_30min_R2 2 TPSSPCPASK 10 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 TPS(0.134)S(0.865)PCPAS(0.001)K;T(0.006)PS(0.049)S(0.925)PCPAS(0.021)K 111.52 0.0059494 32886000 79761 87060 75774 86211 85561 79178 96354 74653 74224 89864 TRUE FALSE 85867.56349 82736.727 78300.26734 79167.28552 82201.44523 82191.17427 83702.60406 84410.40342 80679.86935 86931.74504 0.987758424 0.951743543 0.900709715 0.910683266 0.945586048 0.945467898 0.962854295 0.970996307 0.928082938 1 16.40759548 -7.049243306 2.180299557 0.963278059 0.936146693 0.165268088 0.027453264 0.638483651 6.032433864 0.012731845 0.009649656 8.93E-08 7.049243306 -0.027131365 TPSS(ph)PLQSCTPSLS(ph)PR ddPTM_A459_MK2206_30min_R2 2 TPSSPLQSCTPSLSPR 16 0 R4GNJ5;A0A590TQL1;Q96AP0-2;Q96AP0 R4GNJ5 ACD Adrenocortical dysplasia protein homolog 2 T(0.006)PS(0.156)S(0.838)PLQS(0.014)CT(0.024)PS(0.022)LS(0.941)PR;T(0.004)PS(0.232)S(0.764)PLQSCTPS(0.003)LS(0.997)PR 187.04 1.53E-05 17182800 44394 42991 35148 48973 47774 49401 49222 36012 44383 46276 TRUE FALSE 47792.83877 40856.12945 36319.81678 44971.74924 45898.15271 51280.98967 42759.09227 40718.89205 48243.35311 44766.01791 1.067614253 0.912659454 0.81132561 1.004595703 1.025290049 1.145533868 0.955168547 0.909593793 1.07767801 1 15.45011637 -5.968111341 24.97209422 1.017271651 0.925281498 0.18484175 0.083257384 324.1529703 253843.0388 0.024353735 0.036122118 1.08E-06 5.968111341 -0.091990152 TPSS(ph)PLQSCTPSLSPR ddPTM_A459_MK2206_30min_R2 2 TPSSPLQSCTPSLSPR 16 0 R4GNJ5;A0A590TQL1;Q96AP0-2;Q96AP0 R4GNJ5 ACD Adrenocortical dysplasia protein homolog 1 TPS(0.027)S(0.973)PLQSCTPSLSPR;TPS(0.044)S(0.956)PLQSCTPSLSPR 241.66 1.42E-21 44400000 71310 74802 65604 76221 69043 68369 70174 58731 63559 62705 TRUE FALSE 76769.54843 71087.44145 67791.20462 69993.50048 66332.02491 70970.8302 60960.06951 66407.34335 69087.24693 60658.94099 1.265593286 1.171920253 1.117579758 1.153885962 1.093524282 1.169997845 1.004964289 1.094765953 1.138945814 1 15.88843269 -1.522878745 0.268786356 1.054772674 2.372491865 0.582876979 0.04870262 38.97186141 0.543526097 0.056472465 23.78609662 0.03 1.522878745 1.317719192 TPSSEEIS(ph)PTKFPGLYR ddPTM_A459_MK2206_30min_R1 1 TPSSEEISPTKFPGLYR 17 1 J3QLT3;E7ENF8;A0A1W2PRI7;Q15311 J3QLT3 RALBP1 RalA-binding protein 1 1 TPS(0.001)S(0.001)EEIS(0.741)PT(0.257)KFPGLYR 66.536 0.022507 10643000 1857.9 2110.7 2034.8 1712.3 1719.6 1327.1 1733 1763.7 1599.4 1742.2 TRUE FALSE 1699.875849 1973.293046 1896.683445 1844.181643 1651.104691 1402.239255 1617.394732 1748.280157 1765.663354 1958.036889 0.868153127 1.007791558 0.968665839 0.941852349 0.843244936 0.716145474 0.826028734 0.892873963 0.901751833 1 10.93519223 -6.230472933 5.751018131 0.848654623 0.953399159 0.212798848 0.075042613 0.250035317 25.7151766 0.023003782 0.029169831 5.88E-07 6.230472933 0.104744536 TPSSPLQSCTPS(ph)LSPR ddPTM_A459_MK2206_30min_R2 2 TPSSPLQSCTPSLSPR 16 0 R4GNJ5;A0A590TQL1;Q96AP0-2;Q96AP0 R4GNJ5 ACD Adrenocortical dysplasia protein homolog 1 T(0.004)PSSPLQS(0.001)CT(0.031)PS(0.924)LS(0.039)PR;TPSSPLQS(0.01)CT(0.006)PS(0.983)LS(0.001)PR 88.319 0.014036 30673000 12966.2 16054.2 17145 16480.1 17519.8 16592.4 19844.6 14590.1 15053.4 15066.5 TRUE FALSE 13958.90224 15256.97177 17716.60574 15133.62311 16831.88462 17223.83541 17238.98018 16497.07617 16362.71752 14574.88134 0.957736939 1.046799039 1.21555746 1.03833594 1.154855688 1.1817479 1.182787001 1.131884081 1.122665574 1 13.83119652 -4.993470299 4.396859039 1.135017487 0.969747765 0.421401441 0.062815781 0.16129416 7.87097376 0.015206137 0.059985749 1.02E-05 4.993470299 -0.165269722 TPSSPSKS(ph)PASFEIPASAMEANGVDGDGLNKPAK ddPTM_A459_MK2206_30min_R2 1 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAK 34 2 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y911;Q4VXL4;O95359-2;H0YA73 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.106)PS(0.106)S(0.106)PS(0.098)KS(0.564)PAS(0.018)FEIPAS(0.001)AMEANGVDGDGLNKPAK 62.284 0.00012793 32978000 36630 52946 44373 47647 49694 27091 50346 42506 40374 43617 TRUE FALSE 39434.42096 50316.77863 45852.37367 43754.08768 47742.76387 28121.96699 43735.50972 48061.68014 43885.65754 42193.78086 0.934602687 1.192516471 1.086709291 1.036979545 1.13151187 0.666495545 1.036539244 1.139070241 1.040097774 1 15.36474275 -4.434602218 10.94499552 1.035722191 8.24E-05 0.048268373 0.135892095 79707.2719 343496.9731 0.035446673 1812160.785 3.68E-05 4.434602218 -1.035639764 TPSSS(ph)PPITPPASETK ddPTM_A459_MK2206_30min_R2 2 TPSSSPPITPPASETK 16 0 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 T(0.002)PS(0.032)S(0.145)S(0.676)PPIT(0.145)PPASETK;T(0.002)PSS(0.232)S(0.762)PPIT(0.004)PPASETK 151.11 0.00021064 16278500 45793 60235 54522 55414 63243 57134 81917 61429 70094 90452 TRUE FALSE 49298.94729 57243.81749 56339.73627 50886.49894 60759.76205 59308.27441 71161.1995 69457.98122 76190.64942 87500.55865 0.563412943 0.65421088 0.643878589 0.581556275 0.694392847 0.677804523 0.813265659 0.793800432 0.87074472 1 16.41700461 -7.833020299 0.48560238 1.003038372 0.593297555 0.929062649 0.03479268 0.214704926 0.122717672 0.036165665 0.024601275 1.47E-08 7.833020299 -0.409740817 TPSTVT(ph)LNNNSAPANR ddPTM_A459_MK2206_30min_R2 1 TPSTVTLNNNSAPANR 16 0 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2;Q9ULH0-5 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 TPS(0.016)T(0.095)VT(0.869)LNNNS(0.019)APANR 118.71 0.0040717 6785700 10111 10259 14822 12551 11642 16908 12344 9451.1 12654 12302 TRUE FALSE 10885.10593 9749.552978 15316.15808 11525.54315 11184.87658 17551.44579 10723.21797 10686.39122 13754.62205 11900.58675 0.914669685 0.819249772 1.28700865 0.968485285 0.939859254 1.474838692 0.901066326 0.897971793 1.155793604 1 13.53874509 -5.222925145 24.96189085 1.073474805 0.866959638 0.185352226 0.176866912 934.874925 605909.5156 0.044804633 0.118538132 5.99E-06 5.222925145 -0.206515167 TPSYS(ph)ISSTLNPQAPEFILGCTASK ddPTM_A459_MK2206_30min_R2 1 TPSYSISSTLNPQAPEFILGCTASK 25 0 Q14694;Q14694-3;Q14694-2;H3BQC6 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 T(0.177)PS(0.177)Y(0.151)S(0.208)IS(0.208)S(0.04)T(0.04)LNPQAPEFILGCTASK 75.524 0.00020103 10754000 13796 16076 13034 15913 17676 15288 17321 13083 16367 15555 TRUE FALSE 14852.23237 15277.68922 13468.54705 14612.857 16981.95143 15869.79555 15046.73189 14792.99302 17790.57208 15047.44162 0.98702708 1.015301444 0.895072225 0.971119036 1.128560711 1.054650747 0.999952834 0.983090242 1.182298793 1 13.8772306 -6.117599856 9.667331114 1.05409736 0.964543129 0.326523745 0.063867738 0.470233833 35.97278056 0.01892307 0.024456347 7.63E-07 6.117599856 -0.089554231 TPT(ph)PEPAEVETR ddPTM_A459_MK2206_30min_R1 1 TPTPEPAEVETR 12 0 F8W6G1;Q9UHY1 F8W6G1 NRBP1 Nuclear receptor-binding protein 1 T(0.382)PT(0.617)PEPAEVET(0.001)R 159.58 0.0010867 47389000 1039.4 1080 1051.8 996.6 1241.8 1206.7 1232.4 1235.2 1034.7 887.1 TRUE FALSE 950.9935719 1009.691804 980.4067465 1073.358305 1192.336476 1275.022311 1150.188845 1224.400777 1142.260768 997.0006453 0.95385452 1.012729338 0.983356181 1.076587372 1.195923475 1.27885806 1.153649047 1.228084237 1.14569712 1 9.961450628 -6.015769546 2.851930639 1.182968907 0.986103964 0.573965095 0.070180981 0.171306562 2.81581135 0.02046508 0.030141755 9.64E-07 6.015769546 -0.196864943 TPT(ph)SPLK ddPTM_A459_MK2206_30min_R1 2 TPTSPLK 7 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 T(0.035)PT(0.713)S(0.252)PLK;T(0.074)PT(0.883)S(0.043)PLK 104.2 0.042434 232080000 22634 26176 27936 22752 19997.9 18822.7 23113 24208 21044 20812 TRUE FALSE 20708.85944 24471.93764 26039.78215 24504.36298 19201.3413 19888.42501 21571.17394 23996.35201 23231.59911 23390.34768 0.885359197 1.046240867 1.113270419 1.047627137 0.820908759 0.850283428 0.922225451 1.025908308 0.993213073 1 14.51362569 -6.197719924 24.99995395 0.931800981 1.03121469 0.21847593 0.080507631 328.831435 129014.4366 0.02577886 0.033280361 6.34E-07 6.197719924 0.099413709 TPT(ph)SPLSPSSQK ddPTM_A459_MK2206_30min_R2 1 TPTSPLSPSSQK 12 0 Q5VT06 Q5VT06 CEP350 Centrosome-associated protein 350 1 T(0.277)PT(0.657)S(0.065)PLSPSSQK 92.792 0.042418 0 19949 21461 23192 26468 22441 16579 21032 23178 17697 23196 TRUE FALSE 21476.31078 20395.27795 23965.2097 24305.47973 21559.85358 17209.92546 18270.47314 26207.44418 19236.25307 22439.11642 0.957092533 0.908916268 1.0680104 1.083174546 0.960815621 0.766960924 0.814224268 1.167935657 0.857264284 1 14.45372825 TPT(ph)T(ph)T(ph)PPET(ph)QQSPHLSLK ddPTM_A459_MK2206_30min_R1 1 TPTTTPPETQQSPHLSLK 18 0 Q5FBB7-6;Q5FBB7 Q5FBB7-6 SGOL1 Shugoshin-like 1 4 T(0.296)PT(0.869)T(0.869)T(0.965)PPET(0.594)QQS(0.389)PHLS(0.017)LK 56.488 0.043693 0 325.7 327.52 341.53 288.06 378.07 489.42 311.29 324.67 357.79 144.9 TRUE FALSE 297.9975047 306.1983885 318.3478952 310.2464311 363.0106713 517.1305375 290.5244121 321.8314444 394.9835509 162.8513059 1.829874823 1.880232932 1.95483784 1.905090225 2.229092786 3.175476761 1.783985768 1.976228822 2.425424522 1 7.347411479 -10.49933344 8.954432581 0.999999999 2.128990546 0.422593237 0.395879083 6.26E-09 1.33E-09 0.400819583 0.097213028 3.17E-11 10.49933344 1.128990547 TPTCQSSTDCS(ph)PYAR ddPTM_A459_MK2206_30min_R1 1 TPTCQSSTDCSPYAR 15 0 O95235-2;O95235 O95235-2 KIF20A Kinesin-like protein KIF20A 1 TPTCQS(0.007)S(0.001)T(0.001)DCS(0.99)PYAR 125.39 0.0012338 3047500 672.99 535.14 456.24 377.96 405.94 549.72 550.29 499.99 358.7 433.08 TRUE FALSE 615.7486665 500.3022887 425.2717 407.0705447 389.7705502 580.8446713 513.5811582 495.6186401 395.9881486 486.73322 1.265063984 1.027877836 0.873726474 0.836331953 0.80078888 1.193353253 1.055159453 1.018255216 0.81356302 1 8.926987433 -4.80328854 3.386296844 0.95255394 1.297710376 0.395675724 0.117287131 0.32371912 6.04526308 0.032139181 0.282943668 1.57E-05 4.80328854 0.345156436 TPTGEGLLDS(ph)PSK ddPTM_A459_MK2206_30min_R1 1 TPTGEGLLDSPSK 13 0 O95425-3;O95425;A0A6I8PIX7;A0A0J9YWY6;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 TPTGEGLLDS(0.999)PS(0.001)K 212.43 4.54E-06 14877000 3321.3 3116.3 3282.4 2792.4 2339.9 1975.5 2720.3 2693.4 2743.2 2900.3 TRUE FALSE 3038.805994 2913.428304 3059.599833 3007.471132 2246.696828 2087.351103 2538.83375 2669.851888 3028.365457 3259.61106 0.932260303 0.8937963 0.938639542 0.922647235 0.689253039 0.64036815 0.778876284 0.819070692 0.929057302 1 11.67048412 -6.224527301 23.55472075 0.790409578 0.921033376 0.223061511 0.099010796 399.4809228 254920.1105 0.030188554 0.038971612 5.96E-07 6.224527301 0.130623798 TPTGEGLLDS(ph)PSK ddPTM_A459_MK2206_30min_R2 2 TPTGEGLLDSPSK 13 0 O95425-3;O95425;A0A6I8PIX7;A0A0J9YWY6;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 TPTGEGLLDS(0.999)PS(0.001)K;TPTGEGLLDS(0.567)PS(0.433)K 118.52 0.0034061 33044000 78305 77347 73111 69850 79543 68209 84619 68533 67282 88634 TRUE FALSE 84300.09101 73506.06045 75548.48425 64143.03156 76419.74215 70804.74129 73508.42365 77490.49841 73134.06674 85741.87984 0.983184544 0.857294715 0.881115324 0.748094533 0.891276728 0.825789467 0.857322277 0.903764864 0.852956185 1 16.38771243 -10.5116342 5.1369138 1.00000087 0.863736877 0.332294748 0.056517668 5.54E-07 1.09E-07 0.053808723 0.013050449 3.08E-11 10.5116342 -0.136263993 TPTGNAPSS(ph)ESDIDISSPNVSHDESIAK ddPTM_A459_MK2206_30min_R2 1 TPTGNAPSSESDIDISSPNVSHDESIAK 28 0 O95251;O95251-4 O95251 KAT7 Histone acetyltransferase KAT7 1 T(0.002)PT(0.002)GNAPS(0.135)S(0.43)ES(0.43)DIDISSPNVSHDESIAK 129.53 2.09E-12 3591700 5468.7 6967.2 7554.2 8825.7 8451 7425.6 6854.4 6662 6392.3 7817.6 TRUE FALSE 5887.387877 6621.218979 7806.053258 8104.612078 8119.171277 7708.186411 5954.409046 7532.746274 6948.290699 7562.512352 0.778496299 0.875531658 1.032203703 1.071682491 1.073607671 1.019262654 0.787358588 0.996063996 0.918780741 1 12.88464988 -5.012195192 3.48801968 0.986859251 0.786458257 0.418492891 0.07938284 0.245085517 6.136617876 0.022471697 0.095976168 9.72E-06 5.012195192 -0.200400994 TPTHQPPKPGS(ph)PGRPACPLSNLLLQSYEER ddPTM_A459_MK2206_30min_R1 1 TPTHQPPKPGSPGRPACPLSNLLLQSYEER 30 2 Q96F63 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 1 T(0.02)PT(0.02)HQPPKPGS(0.878)PGRPACPLS(0.083)NLLLQSYEER 48.607 0.010629 26088000 1909.9 2075.5 2077 1940 2256 1811.6 2018.1 2428.9 1562 2121.8 TRUE FALSE 1747.452976 1940.384573 1936.019027 2089.419136 2166.138743 1914.171226 1883.476231 2407.664383 1724.37549 2384.664603 0.732787736 0.813692865 0.81186219 0.87618994 0.908362015 0.802700398 0.789828569 1.00964487 0.72311028 1 11.21957065 -14.52287875 0.082107342 1.469464531 0.695795177 0.28456451 0.080442138 325.8962406 1.880400241 28.37752155 2.478723706 3.00E-15 14.52287875 -0.773669354 TPTHQPPKPGS(ph)PGRPACPLSNLLLQSYEER ddPTM_A459_MK2206_30min_R2 2 TPTHQPPKPGSPGRPACPLSNLLLQSYEER 30 2 Q96F63 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 1 T(0.039)PT(0.039)HQPPKPGS(0.892)PGRPACPLS(0.029)NLLLQSYEER;T(0.059)PT(0.013)HQPPKPGS(0.928)PGRPACPLSNLLLQSYEER 91.655 3.27E-07 22706600 37614 45139 43918 60158 49639 47046 57799 39975 46015 49275 TRUE FALSE 40493.75676 42897.4629 45382.2042 55242.89896 47689.92344 48836.3685 50209.92187 45199.86975 50017.30152 47667.16079 0.849510566 0.899937445 0.952064345 1.158929923 1.000477533 1.024528579 1.053344085 0.948239186 1.049303141 1 15.54070808 -5.421440734 3.490687653 1.031653404 0.874878531 0.584875762 0.053274122 0.166224829 3.716293036 0.014336901 0.032600231 3.79E-06 5.421440734 -0.156774873 TPTS(ph)PLK ddPTM_A459_MK2206_30min_R1 1 TPTSPLK 7 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 T(0.001)PT(0.004)S(0.995)PLK 98.582 0.040219 22072000 3796 5329.7 5462 4708.1 3772.7 4194.9 4502.4 4945.3 4646.6 4255.7 TRUE FALSE 3473.130266 4982.735561 5091.254658 5070.718678 3622.42537 4432.411613 4202.053111 4902.063763 5129.630698 4782.928245 0.726151447 1.041775102 1.064463943 1.060170343 0.757365611 0.926715055 0.878552405 1.02490849 1.072487488 1 12.22367843 -7.86973885 6.875201414 1.039784879 0.931585024 0.166920949 0.111548801 0.440895746 25.05021725 0.064060889 0.030516769 1.35E-08 7.86973885 -0.108199856 TPTS(ph)PLSPSSQK ddPTM_A459_MK2206_30min_R2 1 TPTSPLSPSSQK 12 0 Q5VT06 Q5VT06 CEP350 Centrosome-associated protein 350 1 T(0.042)PT(0.014)S(0.944)PLSPSSQK 100.02 0.01383 4173000 16372 22315 18986 22111 22811 20109 25219 20457 17407 17815 TRUE FALSE 17625.45291 21206.86955 19618.98376 20304.46057 21915.32552 20874.26209 21907.71501 23130.80014 18921.0294 17233.69801 1.022731912 1.230546661 1.138408237 1.178183612 1.271655423 1.21124683 1.271213816 1.342184372 1.09790884 1 14.07294469 -4.757051179 24.93554304 1.207404245 1.022731628 0.218653094 0.093560655 176.0596171 1000311.634 0.022157736 0.170531362 1.75E-05 4.757051179 -0.184672617 TPTS(ph)SPASSPLVAK ddPTM_A459_MK2206_30min_R2 1 TPTSSPASSPLVAK 14 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 T(0.002)PT(0.031)S(0.9)S(0.067)PASSPLVAK 142.39 0.0005465 55284000 90012 110080 96574 115090 121610 116700 167000 142210 152960 198690 TRUE FALSE 96903.38793 104613.5873 99793.72896 105686.7788 116834.9804 121141.1003 145072.6994 160797.3353 166264.1843 192206.7616 0.504162222 0.544276312 0.519199887 0.549859838 0.607860927 0.630264509 0.754774172 0.836585217 0.865027759 1 17.55229956 -7.593540933 0.612946792 0.994255394 0.509071775 0.988969154 0.017146951 0.068853585 0.052476536 0.01584442 0.009508803 2.55E-08 7.593540933 -0.485183619 TPTSS(ph)PAS(ph)SPLVAK ddPTM_A459_MK2206_30min_R2 1 TPTSSPASSPLVAK 14 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 2 T(0.132)PT(0.024)S(0.093)S(0.754)PAS(0.98)S(0.016)PLVAK 121.18 0.035626 6576200 30926 39480 36359 33630 47888 42868 54918 37728 44374 58464 TRUE FALSE 33293.71834 37519.48061 37571.19091 30882.32142 46007.6765 44499.37178 47707.20063 42659.17914 48233.57031 56556.32447 0.588682498 0.663400264 0.66431458 0.546045411 0.813484202 0.78681513 0.843534319 0.754277785 0.852841318 1 15.78740074 -6.473213571 0.152029698 1.105241087 0.338318023 0.774109694 0.061909246 5.756495446 0.32567293 0.445575793 1.121377104 3.36E-07 6.473213571 -0.766923064 TPTSS(ph)PASSPLVAK ddPTM_A459_MK2206_30min_R1 2 TPTSSPASSPLVAK 14 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 TPT(0.001)S(0.022)S(0.919)PAS(0.045)S(0.013)PLVAK;T(0.043)PT(0.003)S(0.099)S(0.752)PAS(0.087)S(0.016)PLVAK 170.56 0.00015716 23619000 7302.1 7679.6 6872.6 6436.1 7379.2 8443.3 11118.9 11343.8 11425.4 9713.1 TRUE FALSE 6681.01805 7179.656644 6406.10706 6931.809537 7085.270838 8921.352349 10377.17847 11244.62235 12613.11122 10916.43216 0.612014801 0.6576926 0.586831573 0.63498856 0.649046386 0.817240672 0.950601654 1.03006387 1.155424321 1 13.41421379 -7.156354431 1.33676314 1.076568224 0.618081518 0.955126112 0.04196242 0.079204822 0.280566226 0.023817149 0.015152762 6.98E-08 7.156354431 -0.458486706 TPTSS(ph)PASSPLVAK ddPTM_A459_MK2206_30min_R2 4 TPTSSPASSPLVAK 14 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 TPTS(0.008)S(0.96)PAS(0.026)S(0.006)PLVAK;TPT(0.002)S(0.041)S(0.945)PAS(0.009)S(0.002)PLVAK;T(0.15)PT(0.009)S(0.029)S(0.809)PAS(0.002)S(0.001)PLVAK;TPT(0.002)S(0.033)S(0.957)PAS(0.004)S(0.003)PLVAK 201.76 5.49E-05 66920900 184218 229343 188763 211687 252355 247556 339756 284929 330091 402107 TRUE FALSE 198321.8717 217954.1601 195056.2642 194391.4949 242446.2747 256976.9171 295145.6291 322170.1986 358801.7185 388986.2815 0.509842843 0.560313231 0.501447669 0.49973869 0.623277185 0.660632339 0.758755882 0.828230233 0.922401986 1 18.56935975 -7.515234166 0.682957589 0.997703476 0.507708035 0.979155365 0.025013515 0.096918462 0.08785797 0.024194082 0.013772599 3.05E-08 7.515234166 -0.489995441 TPTSSPAS(ph)SPLVAK ddPTM_A459_MK2206_30min_R2 3 TPTSSPASSPLVAK 14 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 TPTSS(0.003)PAS(0.498)S(0.498)PLVAK;TPTSSPAS(0.969)S(0.031)PLVAK;TPTSSPAS(0.974)S(0.026)PLVAK 135.91 0.00059943 18795400 29569.4 41636 35684 38544 44088 54732 85157 71908 98513 117273 TRUE FALSE 31833.256 39568.41678 36873.68675 35394.8319 42356.8836 56814.86461 73975.78361 81306.6225 107081.4827 113446.3916 0.28060175 0.348785151 0.325031817 0.311996101 0.37336475 0.500808036 0.652077008 0.716696418 0.943895008 1 16.7916512 -7.613599918 0.770514003 1.009535235 0.303740732 0.984154252 0.032082867 0.072144348 0.080508121 0.02875951 0.014260692 2.43E-08 7.613599918 -0.705794503 down TPTVPDS(ph)PGYMGPTR ddPTM_A459_MK2206_30min_R1 1 TPTVPDSPGYMGPTR 15 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 TPTVPDS(0.999)PGYMGPT(0.001)R 110.6 0.013131 6691200 1863.3 1766.3 1525.3 1368.2 1462.5 1130.8 1098.9 870.81 873.74 742.47 TRUE FALSE 1704.81655 1651.313549 1421.766886 1473.579001 1404.245528 1194.824919 1025.594386 863.1966 964.5683997 834.452789 2.043035356 1.978917886 1.703831426 1.765922555 1.682834004 1.431866409 1.229062207 1.0344463 1.155929266 1 9.704686618 -6.781772624 0.60935925 0.981622945 2.014029975 0.953958438 0.078342579 0.167869183 0.13581375 0.067837659 0.07445951 1.65E-07 6.781772624 1.03240703 up TPTVPDS(ph)PGYMGPTR ddPTM_A459_MK2206_30min_R2 5 TPTVPDSPGYMGPTR 15 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 TPTVPDS(1)PGYMGPTR;TPTVPDS(1)PGYMGPTR;TPTVPDS(1)PGYMGPTR;TPTVPDS(1)PGYMGPTR;TPTVPDS(1)PGYMGPTR 237.59 6.07E-20 87112400 136446 160642 133535 138348 128609 120545 110168 77724.6 97156 86091.7 TRUE FALSE 146892.4107 152664.7519 137986.9903 127044.5258 123559.1645 125132.4244 95702.80926 87883.47209 105606.4533 83282.53488 1.763784098 1.833094443 1.65685387 1.525464205 1.483614357 1.502504993 1.149134202 1.055244923 1.268050419 1 16.34572636 -6.618644441 0.480412294 1.016955374 1.881100411 0.894362881 0.090345338 0.356199528 0.170994297 0.084819483 0.13448499 2.41E-07 6.618644441 0.864145036 TPVAS(ph)THSISSAATPDR ddPTM_A459_MK2206_30min_R1 1 TPVASTHSISSAATPDR 17 0 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YIY6;P27448-6;P27448-7;A2SY06 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 T(0.001)PVAS(0.963)T(0.036)HSISSAATPDR 106.19 0.0025756 5369400 722.35 609.26 442.53 559.97 738.05 784.96 774.44 672.22 554.77 435.22 TRUE FALSE 660.9103393 569.5970633 412.4922966 603.0989864 708.6519057 829.4037569 722.7785206 666.3428514 612.4403268 489.1383393 1.351172636 1.164490733 0.843303956 1.232982447 1.448776039 1.695642501 1.477656652 1.362278926 1.252079989 1 8.934098739 -6.064942814 5.090946808 1.40919883 1.111262838 0.226163025 0.203945996 0.270417889 13.81686494 0.061816599 0.082252676 8.61E-07 6.064942814 -0.297935993 TPVAS(ph)THSISSAATPDR ddPTM_A459_MK2206_30min_R2 1 TPVASTHSISSAATPDR 17 0 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YIY6;P27448-6;P27448-7;A2SY06 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 T(0.002)PVAS(0.971)T(0.023)HS(0.003)ISSAATPDR 165.58 7.60E-06 0 2773.1 4074.4 3322.4 3388.2 4426.1 3661.9 4338.7 3969.1 3336.6 2547.2 TRUE FALSE 2985.410668 3872.071221 3433.167158 3111.373222 4252.309075 3801.256171 3769.023478 4487.874998 3626.811437 2464.085073 1.211569642 1.571403221 1.393282722 1.262689043 1.725715204 1.542664339 1.529583341 1.821314957 1.471869408 1 11.26683635 -4.753579048 24.38064167 1.507213013 1.211568897 0.107136852 0.21990161 424.6779992 1317089.535 0.052606637 0.546378496 1.76E-05 4.753579048 -0.295644116 TPVDES(ph)DDEIQHDEIPTGK ddPTM_A459_MK2206_30min_R2 1 TPVDESDDEIQHDEIPTGK 19 0 A0A087WX60;Q86TC9-2;Q86TC9 A0A087WX60 MYPN Myopalladin 1 T(0.062)PVDES(0.938)DDEIQHDEIPTGK 85.884 0.0024466 5120300 43126 38394 37174 38774 46247 33022 48867 38848 35176 43600 TRUE FALSE 46427.75972 36487.40979 38413.36261 35606.04017 44431.11041 34278.67535 42450.7042 43925.56699 38235.5449 42177.33557 1.100775075 0.865095182 0.910758399 0.844198423 1.053435685 0.812727378 1.006481411 1.041449546 0.906542445 1 15.36418034 TPVEAGVSQS(ph)DAENAAPSCPDEHDTLPR ddPTM_A459_MK2206_30min_R2 1 TPVEAGVSQSDAENAAPSCPDEHDTLPR 28 0 Q9H4Z2-2;Q9H4Z2 Q9H4Z2-2 ZNF335 Zinc finger protein 335 1 TPVEAGVS(0.117)QS(0.883)DAENAAPSCPDEHDTLPR 103.39 3.07E-06 0 7588.4 14294 12329 11235 13282 11138 11517 9693.9 8435.2 12536 TRUE FALSE 8169.373738 13584.18075 12740.04271 10317.06456 12760.48194 11561.86439 10004.80407 10960.92601 9168.878449 12126.95135 0.673654367 1.120164529 1.0505561 0.850755006 1.052241539 0.95340239 0.825005707 0.903848436 0.756074481 1 13.56592929 -7.193127873 7.292161314 0.863378457 0.962937315 0.074757396 0.130382503 0.610729302 57.28905722 0.04817228 0.03718796 6.41E-08 7.193127873 0.099558857 TPVEPEVAIHR ddPTM_A459_MK2206_30min_R1 4 TPVEPEVAIHR 11 0 P60866;P60866-2;E5RIP1;E5RJX2 P60866 RPS20 40S ribosomal protein S20 0 ;;; 199.68 2.68E-05 44869400 22425.6 23292.4 20830.3 18026 22341.8 20557.7 22840.4 20686 20177.4 19688.7 FALSE TRUE 20518.18496 21776.06053 19416.39727 19414.36564 21451.8788 21721.65921 21316.75859 20505.14448 22274.91294 22127.8848 0.92725469 0.984100411 0.877462869 0.877371056 0.96945004 0.981641915 0.963343708 0.926665367 1.006644473 1 14.43357793 -6.358041906 10.48562773 0.970842196 0.918603479 0.399504639 0.034662278 0.620920011 64.16535526 0.011256618 0.012762491 4.38E-07 6.358041906 -0.052238717 TPVEPEVAIHR ddPTM_A459_MK2206_30min_R2 2 TPVEPEVAIHR 11 0 P60866;P60866-2;E5RIP1;E5RJX2 P60866 RPS20 40S ribosomal protein S20 0 ; 178.46 8.28E-05 32619000 139548 162335 164320 186871 165602 172310 187729 145486 151860 168719 FALSE TRUE 150231.9022 154273.68 169798.3468 171603.0415 159099.6334 178867.3778 163079.9568 164501.5197 165068.5083 163213.7128 0.920461275 0.945224989 1.040343632 1.051400881 0.974793298 1.095909006 0.999180485 1.007890311 1.011364213 1 17.31640275 -5.164164115 4.474440551 1.023918956 0.926781783 0.557536359 0.032180868 0.153455579 5.145227444 0.008059962 0.02347219 6.85E-06 5.164164115 -0.097137173 TPVKPSS(ph)VEEEDSFFR ddPTM_A459_MK2206_30min_R1 1 TPVKPSSVEEEDSFFR 16 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 TPVKPS(0.355)S(0.571)VEEEDS(0.074)FFR 82.609 0.010876 6241800 1279.9 1247.6 1976.7 1248.2 1231.1 1069.2 944.88 866.21 1232.2 1068.2 TRUE FALSE 1171.037784 1166.381013 1842.527111 1344.33658 1182.06268 1129.73718 881.8487792 858.6368173 1360.291599 1200.53668 0.975428575 0.971549668 1.534752866 1.11977968 0.984611882 0.941026791 0.734545469 0.715210815 1.133069586 1 10.22946377 -6.459410671 2.442990109 0.876772292 1.164573887 0.27796513 0.184901831 0.369732083 4.367017818 0.067140549 0.074962774 3.47E-07 6.459410671 0.287801595 TPVQYSQQQNS(ph)PQK ddPTM_A459_MK2206_30min_R1 4 TPVQYSQQQNSPQK 14 0 P46013 P46013 MKI67 Antigen KI-67 1 TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK 257.46 1.24E-35 58281800 13089.6 14818 14475.9 11058.2 11330.8 12215.1 11263.8 12896.9 14316.1 10776.6 TRUE FALSE 11976.26078 13853.34551 13493.31624 11909.90448 10879.47024 12906.70841 10512.41245 12784.14376 15804.30983 12111.68657 0.988818586 1.143799869 1.114074094 0.983339885 0.898262202 1.065640886 0.867956118 1.055521351 1.304881012 1 13.56411216 -10.80552093 3.794343749 0.999924473 1.041043424 0.011569293 0.119465522 88407079.3 7.724080973 60139.07594 0.029569024 1.56E-11 10.80552093 0.041118951 TPVQYSQQQNS(ph)PQK ddPTM_A459_MK2206_30min_R2 6 TPVQYSQQQNSPQK 14 0 P46013 P46013 MKI67 Antigen KI-67 1 TPVQYS(0.002)QQQNS(0.998)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYS(0.002)QQQNS(0.998)PQK;TPVQYSQQQNS(1)PQK 221.34 6.48E-09 181049400 132520.8 171566.4 155893.3 184672.5 170343 142861.8 272627 205707 125689.8 180315 TRUE FALSE 142666.6943 163046.6621 161090.7048 169584.166 163654.4779 148298.5059 236830.7474 232593.6112 136622.0716 174431.3363 0.817896012 0.934732632 0.923519295 0.972211585 0.938217188 0.850182708 1.357730511 1.33343937 0.783242705 1 17.41229972 -7.235253675 24.9732323 1.146389813 0.912679942 0.295245498 0.158318714 861.2984003 821419.1647 0.060078814 0.04652193 5.82E-08 7.235253675 -0.233709871 TPVS(ph)GSLKSPVPR ddPTM_A459_MK2206_30min_R2 1 TPVSGSLKSPVPR 13 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 T(0.122)PVS(0.461)GS(0.368)LKS(0.048)PVPR 64.04 0.044062 92065000 79045 90919 76326 82781 83799 71659 102310 64183 75564 78189 TRUE FALSE 85096.74598 86404.09467 78870.67075 76017.5275 80508.6302 74386.03346 88876.5741 72571.93847 82136.42013 75637.69933 1.125057302 1.142341655 1.042742858 1.005021678 1.064398189 0.983451825 1.175030109 0.95946782 1.08591907 1 16.20681786 -5.265842461 23.04190891 1.040552286 1.133699492 0.296844665 0.0579718 133.7476633 699935.8396 0.014093255 0.031149571 5.42E-06 5.265842461 0.093147205 TPVS(ph)PVK ddPTM_A459_MK2206_30min_R1 1 TPVSPVK 7 0 P23443-3;P23443-5;P23443-2;P23443 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 TPVS(1)PVK 89.029 0.031501 58401000 4858.7 5216.4 5392.7 4514.8 4101.9 4321.1 4959.2 4061.7 5790.4 6573.6 TRUE FALSE 4445.442051 4876.811412 5026.658549 4862.530678 3938.512637 4565.756948 4628.380817 4026.188985 6392.332801 7387.987196 0.601712203 0.660100144 0.680382683 0.658167177 0.533096841 0.617997409 0.626473855 0.544964261 0.865233335 1 12.85096565 -8.442842969 3.866356425 0.997237238 0.618865213 0.887614831 0.046236693 0.064606324 1.770289239 0.046913574 0.012344121 3.61E-09 8.442842969 -0.378372025 TPVS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 TPVSPVK 7 0 P23443-3;P23443-5;P23443-2;P23443 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 T(0.001)PVS(0.999)PVK;T(0.002)PVS(0.998)PVK 89.886 0.030375 38887000 332900 290970 284930 301290 301990 217548 316120 254730 216398 334120 TRUE FALSE 358387.08 276520.8529 294429.424 276673.6432 290132.3552 225826.9416 274613.0643 288024.0856 235219.9069 323217.6918 1.10881022 0.855525115 0.910932265 0.855997831 0.897637607 0.698683727 0.849622627 0.891114852 0.727744529 1 18.30214664 -2.187428329 1.232768565 0.841467732 199.9999425 0.445303641 0.083700491 992.2877875 2.682811069 0.023175272 557485.7867 0.006494888 2.187428329 199.1584748 TPVSGSLKS(ph)PVPR ddPTM_A459_MK2206_30min_R1 1 TPVSGSLKSPVPR 13 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 TPVSGS(0.001)LKS(0.999)PVPR 116.79 0.017767 59993000 1846 1859.7 1901.4 1811.4 1718.6 1570.7 1698.9 1467.8 1481 1432.2 TRUE FALSE 1688.988006 1738.633192 1772.338266 1950.914342 1650.144523 1659.631677 1585.569481 1454.967179 1634.95525 1609.631749 1.049300878 1.080143451 1.101083069 1.212025262 1.025168971 1.031062961 0.985051073 0.903913072 1.015732481 1 10.65251495 -6.773274287 1.960815853 0.971507903 1.106338744 0.553318128 0.051357425 0.245306121 1.943747057 0.021422807 0.019493285 1.69E-07 6.773274287 0.134830842 TQADVT(ph)TVNGT(ph)QTNPNIKK ddPTM_A459_MK2206_30min_R2 1 TQADVTTVNGTQTNPNIKK 19 1 Q8IYA6;Q8IYA6-2;Q8IYA6-3 Q8IYA6 CKAP2L Cytoskeleton-associated protein 2-like 2 T(0.22)QADVT(0.41)T(0.369)VNGT(0.553)QT(0.448)NPNIKK 60.747 0.03351 0 10392 12079 13550 13409 12751 9161.5 15162 10300 10218 14367 TRUE FALSE 11187.61951 11479.17442 14001.75024 12313.44181 12250.33167 9510.147302 13171.21119 11646.24537 11106.74317 13898.20597 0.804968608 0.825946489 1.00745019 0.885973473 0.881432589 0.684271576 0.947691466 0.837967533 0.799149415 1 13.76261105 -10.98016875 2.959472488 1.003567202 0.855743745 0.218668225 0.08332502 72096186.5 83855194.54 2129487.189 0.020770299 1.05E-11 10.98016875 -0.147823457 TQASS(ph)SFQDSSQPAGK ddPTM_A459_MK2206_30min_R2 1 TQASSSFQDSSQPAGK 16 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 TQASS(0.5)S(0.5)FQDSSQPAGK 281.49 1.17E-62 4237100 23836 24262 21449 27713 21363 19218 27936 17824 16295 22432 TRUE FALSE 25660.90249 23057.18436 22164.09895 25448.75925 20524.18128 19949.35446 24267.96964 20153.658 17712.30965 21700.04568 1.182527579 1.062540821 1.021384899 1.172751414 0.945812815 0.919323155 1.118337261 0.928738045 0.816233749 1 14.40541046 -5.932269374 0.469181337 0.928012484 1.17418939 0.386470649 0.088276308 2.097648452 0.749546344 0.075273156 0.258215235 1.17E-06 5.932269374 0.246176906 TQASSS(ph)FQDSSQPAGK ddPTM_A459_MK2206_30min_R2 1 TQASSSFQDSSQPAGK 16 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 TQASS(0.024)S(0.974)FQDS(0.002)SQPAGK 255.93 1.65E-30 3084700 16504 18108 13642 20937 12905 14983 23672 14456 12831 14459 TRUE FALSE 17767.55893 17208.78305 14096.81747 19226.38013 12398.28486 15553.18856 20563.83796 16345.44883 13947.01719 13987.20401 1.27027238 1.230323304 1.007836695 1.374569221 0.886401946 1.111958369 1.47018932 1.168600159 0.997126886 1 13.77181998 -8.244453431 5.986299232 0.99682266 1.188552348 0.1890111 0.158864035 0.264095927 38.85343796 0.122491012 0.040885847 5.70E-09 8.244453431 0.191729688 TQDPS(ph)SPGTTPPQAR ddPTM_A459_MK2206_30min_R1 1 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 TQDPS(0.479)S(0.479)PGT(0.041)TPPQAR 233.47 3.22E-14 78047000 5223 4676.7 4140.7 4354 5096.2 4128.4 4713.6 4426.6 3322.5 3972.1 TRUE FALSE 4778.756423 4372.24598 3859.640821 4689.345834 4893.207563 4362.14644 4399.164344 4387.898703 3667.885765 4464.193736 1.070463494 0.979403278 0.864577357 1.050435109 1.096101077 0.977140935 0.985433116 0.982909561 0.821623339 1 12.12418392 -8.028078743 22.64639844 0.907963133 1.000238008 0.202460509 0.072219802 360.7415054 290944.0616 0.049000217 0.01865444 9.37E-09 8.028078743 0.092274874 TQDPS(ph)SPGTTPPQAR ddPTM_A459_MK2206_30min_R2 1 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 TQDPS(0.496)S(0.496)PGT(0.005)T(0.002)PPQAR 107.13 0.0043152 106790000 12456 15162 16567 14179 16221 17458 16572 15721 14028 15230 TRUE FALSE 13409.64094 14409.07713 17119.33551 13020.53034 15584.08204 18122.37642 14396.07649 17775.78868 15248.13008 14733.04635 0.910174354 0.978010711 1.161968483 0.883763618 1.057763728 1.230049509 0.977128297 1.206524996 1.034961116 1 13.84676815 -6.515758645 24.9668966 1.100969902 0.992703622 0.187754254 0.102585441 530.3999782 1859873.182 0.031804527 0.033062647 3.05E-07 6.515758645 -0.10826628 TQDPSS(ph)PGTTPPQAR ddPTM_A459_MK2206_30min_R1 1 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 TQDPS(0.008)S(0.975)PGT(0.017)TPPQAR 240.5 4.04E-20 68915000 5381.7 5007.8 4504.2 4227.5 4990.1 3841.7 4604.2 3852 3943.2 3245.7 TRUE FALSE 4923.958155 4681.79131 4198.467453 4553.102782 4791.33375 4059.213734 4297.062219 3818.32237 4353.109751 3647.80182 1.349842562 1.2834555 1.15095821 1.248177123 1.313485213 1.112783516 1.177986752 1.046746111 1.193351494 1 11.83281164 -1.522878745 0.082567112 0.836778201 2.142577699 0.621878283 0.066549353 123.1024757 0.741311991 1.706326526 18.29291072 0.03 1.522878745 1.305799498 TQDPSS(ph)PGTTPPQAR ddPTM_A459_MK2206_30min_R2 2 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 TQDPS(0.216)S(0.733)PGT(0.051)TPPQAR;TQDPS(0.048)S(0.817)PGT(0.135)TPPQAR 198.61 2.46E-05 121296000 65823 79962 75266 85655 88840 80470 88375 79604 73532 77619 TRUE FALSE 70862.45949 75991.20336 77775.33087 78656.7125 85351.69521 83532.34224 76771.25634 90008.51612 79927.68044 75086.29839 0.943746875 1.012051533 1.035812559 1.047550807 1.136714648 1.112484488 1.022440285 1.198734231 1.06447757 1 16.19626205 -5.084685123 0.941842766 1.095763066 0.911939005 0.3938949 0.054721155 1.307270496 1.265899175 0.01882654 0.222496563 8.23E-06 5.084685123 -0.183824062 TQDPSSPGT(ph)TPPQAR ddPTM_A459_MK2206_30min_R1 1 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 TQDPS(0.099)S(0.12)PGT(0.77)T(0.011)PPQAR 183.76 4.90E-05 5073500 2410.1 2117.1 2302 1899.8 2624.3 2519.8 2274.5 2087.9 1960.9 2025.6 TRUE FALSE 2205.108339 1979.276405 2145.746654 2046.122925 2519.768574 2662.468898 2122.772255 2069.64571 2164.742572 2276.54662 0.968619891 0.869420546 0.942544569 0.898783669 1.106838117 1.16952092 0.932452793 0.909116331 0.950888751 1 11.15263129 -6.22051289 24.98217805 1.010877101 0.917862202 0.249688684 0.077778581 831.2954921 507435.8221 0.025790132 0.033294563 6.02E-07 6.22051289 -0.093014899 TQDPSSPGT(ph)TPPQAR ddPTM_A459_MK2206_30min_R2 2 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 TQDPS(0.014)S(0.057)PGT(0.888)T(0.041)PPQAR;TQDPS(0.001)S(0.016)PGT(0.491)T(0.491)PPQAR 102.5 0.014625 17185600 78522 95903 82904 99656 102752 106094 119800 102371 108808 117994 TRUE FALSE 84533.70469 91140.59648 85667.97798 91513.78602 98717.44019 110131.4815 104070.1161 115751.2412 118271.9232 114143.8654 0.740589119 0.798471264 0.750526344 0.80174073 0.864851035 0.964848011 0.911745153 1.014082016 1.036165393 1 16.8004938 -6.676323132 0.830307426 1.015735936 0.752452926 0.920003891 0.030130062 0.160052055 0.242930462 0.019259858 0.019996102 2.11E-07 6.676323132 -0.26328301 TQDPSSPGTT(ph)PPQAR ddPTM_A459_MK2206_30min_R2 1 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 TQDPS(0.221)S(0.033)PGT(0.033)T(0.714)PPQAR 123.63 0.0033212 5910900 20023 21100 24146 21470 22648 27128 30742 25365 29249 34788 TRUE FALSE 21555.97628 20052.20468 24951.01559 19715.83232 21758.72572 28160.37505 26705.53847 28680.29259 31793.02515 33652.87041 0.640539009 0.595854215 0.741423103 0.585858861 0.646563739 0.836789692 0.793559008 0.852239118 0.944734424 1 15.03844194 -7.487236756 0.620008146 0.997548204 0.623016876 0.84942884 0.053749421 0.287205338 0.221728423 0.050652516 0.031832223 3.26E-08 7.487236756 -0.374531328 TQDPVPPETPS(ph)DSDHK ddPTM_A459_MK2206_30min_R2 2 TQDPVPPETPSDSDHK 16 0 J3KR33;A0JLT2 J3KR33 MED19 Mediator of RNA polymerase II transcription subunit 19 1 TQDPVPPETPS(0.877)DS(0.123)DHK;TQDPVPPET(0.002)PS(0.673)DS(0.326)DHK 130.01 0.00054377 15023800 103020 131432 114075 142190 154431 125646 171720 120641 113026 156586 TRUE FALSE 110907.2904 124905.278 117878.2036 130572.6222 148367.263 130427.5466 149172.9577 136409.1929 122856.7972 151476.6116 0.732174355 0.824584579 0.778194087 0.861998567 0.979473078 0.861040824 0.984792016 0.900529735 0.811061165 1 17.20873553 -5.924260682 3.720521372 0.91833742 0.783150017 0.545676508 0.058754814 0.180455883 4.956858548 0.016654204 0.025458565 1.19E-06 5.924260682 -0.135187402 TQEDEEEISTS(ph)PGVSEFVSDAFDACNLNQEDLRK ddPTM_A459_MK2206_30min_R1 1 TQEDEEEISTSPGVSEFVSDAFDACNLNQEDLRK 34 1 Q96A49 Q96A49 SYAP1 Synapse-associated protein 1 1 TQEDEEEIS(0.014)T(0.226)S(0.754)PGVS(0.006)EFVSDAFDACNLNQEDLRK 135.47 9.49E-26 15805000 1928.5 1646.8 1328.4 1568.1 1814.6 1242.3 1302 1636.7 1436.2 1062.3 TRUE FALSE 1764.470948 1539.593021 1238.231909 1688.875334 1742.32064 1312.637952 1215.145956 1622.390504 1585.498129 1193.905744 1.477898031 1.289543189 1.037127022 1.414580123 1.459345219 1.099448561 1.017790526 1.35889329 1.327992714 1 10.22147323 -6.777564655 24.99940245 1.174316202 1.32092954 0.227870938 0.158831436 482.6341102 748234.6312 0.059307122 0.0524621 1.67E-07 6.777564655 0.146613338 TQEDEEEISTSPGVS(ph)EFVSDAFDACNLNQEDLRK ddPTM_A459_MK2206_30min_R1 1 TQEDEEEISTSPGVSEFVSDAFDACNLNQEDLRK 34 1 Q96A49 Q96A49 SYAP1 Synapse-associated protein 1 1 TQEDEEEIS(0.078)T(0.265)S(0.265)PGVS(0.375)EFVS(0.017)DAFDACNLNQEDLRK 107.95 3.26E-14 9685300 1076.6 1317.6 1074.9 1366.2 1192.7 982.26 847.14 1470.5 951.27 787.32 TRUE FALSE 985.0295165 1231.824001 1001.938783 1471.424961 1145.192233 1037.874712 790.6288363 1457.643574 1050.157921 884.8591456 1.113204877 1.392113091 1.132314434 1.662891736 1.294208507 1.172926468 0.893508125 1.647317068 1.186808009 1 9.789304011 -6.618531709 6.137026117 1.203934373 1.335225274 0.07803247 0.231756782 0.661979467 35.46336961 0.077125754 0.077031382 2.41E-07 6.618531709 0.131290901 TQEDEEEISTSPGVS(ph)EFVSDAFDACNLNQEDLRK ddPTM_A459_MK2206_30min_R2 1 TQEDEEEISTSPGVSEFVSDAFDACNLNQEDLRK 34 1 Q96A49 Q96A49 SYAP1 Synapse-associated protein 1 1 TQEDEEEIS(0.163)T(0.163)S(0.163)PGVS(0.407)EFVS(0.104)DAFDACNLNQEDLRK 63.913 0.00011796 3507500 6758.8 8323.1 7653.6 9883.6 9672.9 6138.8 9949.6 9822.5 8219.2 9186.5 TRUE FALSE 7276.258925 7909.786957 7908.767204 9076.078264 9293.093344 6372.416336 8643.205568 11106.33448 8934.091159 8886.745257 0.818776584 0.89006568 0.88995093 1.021305101 1.045725187 0.717069765 0.972595176 1.24976402 1.005327699 1 13.11743942 -7.533539484 24.5633527 1.098763518 0.903557978 0.37272836 0.108487082 181.200252 417495.3724 0.050806598 0.029371793 2.93E-08 7.533539484 -0.19520554 TQGQDSLEAQLSS(ph)LESSRR ddPTM_A459_MK2206_30min_R1 1 TQGQDSLEAQLSSLESSRR 19 1 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 TQGQDSLEAQLS(0.069)S(0.727)LES(0.184)S(0.02)RR 51.535 0.040186 5634400 715.45 446.05 706.8 556.97 665.5 619.94 674.54 560.93 452.91 414.69 TRUE FALSE 654.5972205 417.0120639 658.8243853 599.8679259 638.9917258 655.0404671 629.5426674 556.0258481 499.9916153 466.0649279 1.404519373 0.894751008 1.413589279 1.287090896 1.371035852 1.405470414 1.350761728 1.193022291 1.072793908 1 8.864387142 -8.191701466 2.321031311 1.012879578 1.297518327 0.351751307 0.144744459 0.358833892 3.457142753 0.132468935 0.039586081 6.43E-09 8.191701466 0.28463875 TQHIQQPR ddPTM_A459_MK2206_30min_R2 1 TQHIQQPR 8 0 P51397 P51397 DAP Death-associated protein 1 0 124.08 0.0078629 643040 3829.9 5331.2 5787.7 5473.2 5854.2 5467.8 6144.6 5110.9 5971.7 4470.4 FALSE TRUE 4123.120089 5066.46036 5980.659029 5026.022052 5624.334693 5675.88096 5337.806639 5778.912178 6491.107672 4324.531214 0.953425906 1.171562907 1.382961235 1.162211996 1.300565174 1.312484679 1.234308732 1.336309508 1.500996836 1 12.07832804 -4.857574016 3.084549693 1.287085828 0.928508049 0.377491382 0.126495548 0.300113769 4.634898706 0.030602114 0.241129724 1.39E-05 4.857574016 -0.358577779 TQKPNPAVPPPLS(ph)SSPLYSR ddPTM_A459_MK2206_30min_R2 1 TQKPNPAVPPPLSSSPLYSR 20 1 O75140;H0Y770;A0A2R8Y6V4;A0A5F9UWT1;A0A2R8Y5T1;A0A2R8Y5K9;A0A2R8Y721;A0A2R8Y6H3;O75140-6;A0A2R8Y842;A0A2R8Y7U0;O75140-8;O75140-5;O75140-1;O75140-4;O75140-9;A0A2R8YEW8;H7C1T0 O75140 DEPDC5 DEP domain-containing protein 5 1 TQKPNPAVPPPLS(0.699)S(0.145)S(0.145)PLYS(0.011)R 107.75 0.00024222 5378400 51138 67909 55051 61903 66130 68795 81736 61695 61612 65671 TRUE FALSE 55053.1646 64536.73781 56886.37286 56845.32688 63533.40392 71413.04193 71003.96502 69758.74833 66970.90039 63528.16065 0.866594657 1.015876064 0.895451281 0.894805175 1.000082535 1.124116316 1.117677016 1.098075997 1.054192341 1 15.95510863 -6.534482447 4.121603347 1.08670224 0.924783687 0.696361851 0.049717381 0.115658568 4.590335716 0.016284925 0.017067793 2.92E-07 6.534482447 -0.161918553 TQKPNPAVPPPLSSSPLYS(ph)R ddPTM_A459_MK2206_30min_R2 1 TQKPNPAVPPPLSSSPLYSR 20 1 O75140;H0Y770;A0A2R8Y6V4;A0A5F9UWT1;A0A2R8Y5T1;A0A2R8Y5K9;A0A2R8Y721;A0A2R8Y6H3;O75140-6;A0A2R8Y842;A0A2R8Y7U0;O75140-8;O75140-5;O75140-1;O75140-4;O75140-9;A0A2R8YEW8;H7C1T0 O75140 DEPDC5 DEP domain-containing protein 5 1 TQKPNPAVPPPLS(0.198)S(0.198)S(0.198)PLY(0.038)S(0.369)R 81.477 0.0020275 5131400 46825 58962 48119 68431 59688 55120 70317 60879 59326 58932 TRUE FALSE 50409.958 56034.03282 49723.26344 62839.9684 57344.34921 57217.63022 61084.29343 68836.09433 64486.06824 57009.05367 0.884244778 0.982897088 0.872199418 1.102280504 1.005881444 1.003658657 1.07148408 1.207458989 1.131154862 1 15.79890343 -6.101472214 0.633331105 1.114745041 0.89348944 0.46588944 0.072738268 0.881272946 0.702760606 0.047968279 0.113840935 7.92E-07 6.101472214 -0.221255601 TQLAS(ph)WSDPTEETGPVAGILDTETLEK ddPTM_A459_MK2206_30min_R1 1 TQLASWSDPTEETGPVAGILDTETLEK 27 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 T(0.025)QLAS(0.608)WS(0.367)DPTEETGPVAGILDTETLEK 190.83 1.67E-32 5806400 1101.5 976.16 914.26 945.89 663.13 625.96 707.98 870.09 688.81 545.84 TRUE FALSE 1007.811641 912.6118066 852.2025785 1018.742612 636.7161279 661.4013143 660.751946 862.4828949 760.4142644 613.4627801 1.642824428 1.487640059 1.389167536 1.660642903 1.037905067 1.078144161 1.077085632 1.405925384 1.239544255 1 9.260832005 -6.262814063 24.99998168 1.153848429 1.529830888 0.696254611 0.130792987 80.59400088 1465681 0.042020049 0.050266498 5.46E-07 6.262814063 0.375982459 TQLAS(ph)WSDPTEETGPVAGILDTETLEK ddPTM_A459_MK2206_30min_R2 2 TQLASWSDPTEETGPVAGILDTETLEK 27 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 T(0.02)QLAS(0.638)WS(0.337)DPT(0.005)EETGPVAGILDTETLEK;T(0.024)QLAS(0.638)WS(0.338)DPTEETGPVAGILDTETLEK 150.31 4.11E-14 25326800 86737.5 113877.2 99710.1 116064.8 108265 70477 95502.4 63898.9 71219.9 82146.5 TRUE FALSE 93378.18969 108222.2238 103034.385 106581.9346 104013.9721 73159.05162 82962.82016 72250.70563 77414.47817 79466.06643 1.175069988 1.36186713 1.29658343 1.34122575 1.308910542 0.920632603 1.044003106 0.909201989 0.974182839 1 16.27805131 -6.757066127 24.99999794 0.968579149 1.302813766 0.887496984 0.058214463 32.07073758 183334.6303 0.018639383 0.018026747 1.75E-07 6.757066127 0.334234617 TQLASWS(ph)DPTEETGPVAGILDTETLEK ddPTM_A459_MK2206_30min_R1 1 TQLASWSDPTEETGPVAGILDTETLEK 27 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 T(0.001)QLAS(0.017)WS(0.98)DPT(0.002)EETGPVAGILDTETLEK 227.56 7.75E-49 23816000 2319.9 2529.2 2146 1937.8 2163.5 1365.5 1584.6 1529.1 1788.1 1143.1 TRUE FALSE 2122.580323 2364.54862 2000.335499 2087.049692 2077.323214 1442.81343 1478.894225 1515.73124 1973.979394 1284.715858 1.652178814 1.840522638 1.557025615 1.624522402 1.616951485 1.123060341 1.151144991 1.179818269 1.536510491 1 10.3272336 -6.715463241 6.537783587 1.206521786 1.663985013 0.717722685 0.144293243 0.10958559 11.21733435 0.048255359 0.047647274 1.93E-07 6.715463241 0.457463227 TQLASWS(ph)DPTEETGPVAGILDTETLEK ddPTM_A459_MK2206_30min_R2 2 TQLASWSDPTEETGPVAGILDTETLEK 27 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 T(0.014)QLAS(0.302)WS(0.683)DPTEETGPVAGILDTETLEK;T(0.008)QLAS(0.152)WS(0.767)DPT(0.03)EET(0.043)GPVAGILDTETLEK 125.86 4.81E-12 22317600 77893 94018 82552 77397 74506 60746 64559 45094 56858 60919 TRUE FALSE 83856.54797 89349.20283 85304.24248 71073.41752 71580.52008 63057.7316 56082.32575 50987.94063 61803.40606 58931.21802 1.4229563 1.516160803 1.447522134 1.206040192 1.214645183 1.07002254 0.951657333 0.865211043 1.048737972 1 15.84674446 -6.27178131 0.913147767 0.950947149 1.497384009 0.904096773 0.066282907 0.163431286 0.291210699 0.033256312 0.053100012 5.35E-07 6.27178131 0.54643686 TQLEELEDELQATEDAK ddPTM_A459_MK2206_30min_R1 1 TQLEELEDELQATEDAK 17 0 P35579;P35579-2;P35749-4;P35749-3;P35749;P35749-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35579-2;P35749-4;P35580 MYH9;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 0 314.06 2.64E-102 3554000 1573.7 1607.6 1230.8 1449 1574.8 1244.9 1274.4 1481.8 1487.3 1396.6 FALSE TRUE 1439.848551 1502.944948 1147.256725 1560.602231 1512.072381 1315.385162 1189.387101 1468.844779 1641.910157 1569.621352 0.917322225 0.957520708 0.730913047 0.994253951 0.963335762 0.838027057 0.757754155 0.935795615 1.046054933 1 10.61620086 -8.005681522 24.89204712 1.01232677 0.880535036 0.322345151 0.082235268 285.6213269 1251364.57 0.048690567 0.02220865 9.87E-09 8.005681522 -0.131791734 TQLEELEDELQATEDAK ddPTM_A459_MK2206_30min_R2 5 TQLEELEDELQATEDAK 17 0 P35579;P35579-2;P35749-4;P35749-3;P35749;P35749-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35579-2;P35749-4;P35580 MYH9;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 0 ;;;; 241.93 6.44E-51 6756800 25631.6 25599.6 26188.6 25402.6 29115.6 21311.6 30013.1 26099.5 19166.8 30568.7 FALSE TRUE 27593.975 24328.36109 27061.71485 23327.12632 27972.37525 22122.62787 26072.34392 29510.79426 20833.89362 29571.24582 0.933135356 0.822703285 0.915136109 0.788844896 0.945931579 0.748112812 0.881678915 0.997955732 0.704532157 1 14.8519074 -10.69649183 4.996601374 1.000010237 0.862189878 0.183565566 0.08858309 9.31E-06 1.54E-06 0.079065528 0.019174783 2.01E-11 10.69649183 -0.137820359 TQLGEDHEK ddPTM_A459_MK2206_30min_R2 1 TQLGEDHEK 9 0 K7EIG1;I3L2B0;A0A494C0R8;O75153 K7EIG1 CLUH Clustered mitochondria protein homolog 0 103.31 0.02157 2010800 9860.4 17016 10745 12558 20185 11988 15403 16506 15339 15862 FALSE TRUE 10615.31981 16171.01018 11103.23294 11531.97123 19392.43548 12444.21174 13380.5676 18663.39087 16673.15849 15344.42424 0.691803071 1.053868815 0.723600493 0.751541475 1.263809914 0.81099242 0.872014967 1.216297893 1.086593947 1 13.90542689 -6.581085443 0.611147477 1.079368269 0.807810171 0.228355714 0.172128897 1.403848651 1.1525099 0.135572052 0.182840372 2.62E-07 6.581085443 -0.271558098 TQLS(ph)PSIK ddPTM_A459_MK2206_30min_R1 1 TQLSPSIK 8 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 T(0.034)QLS(0.957)PS(0.009)IK 99.343 0.018728 6956100 1962.4 1952.9 2123.9 1835.2 1640.3 1428.3 1784 1536.4 2024.1 2292.9 TRUE FALSE 1795.487575 1825.765855 1979.735586 1976.547422 1574.963378 1509.169112 1664.992615 1522.967417 2234.512438 2576.961763 0.696745913 0.708495517 0.768244067 0.767006888 0.611170643 0.585638923 0.646106838 0.590993409 0.867111212 1 11.33145542 -8.478154772 4.19477889 0.99874966 0.674507964 0.750180282 0.06264303 0.100343168 3.937655425 0.068525501 0.01793819 3.33E-09 8.478154772 -0.324241695 TQLS(ph)PSIK ddPTM_A459_MK2206_30min_R2 3 TQLSPSIK 8 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 T(0.359)QLS(0.625)PS(0.015)IK;T(0.001)QLS(0.984)PS(0.015)IK;T(0.01)QLS(0.977)PS(0.013)IK 113.67 0.010648 80652000 382443 280032 297513 312818 252205 220039 342599 254962 187090 323798 TRUE FALSE 411723.1301 266126.0181 307431.9349 287259.7687 242302.1645 228412.7383 297615.3398 288286.4088 203362.75 313232.4978 1.314432995 0.849611774 0.981481606 0.917081627 0.773553722 0.729211496 0.950141961 0.920359193 0.649238988 1 18.25687437 -2.676313484 1.428375559 0.853030333 200 0.586285408 0.111678774 430.4819458 2.675258743 0.031241735 279147.4699 0.002107107 2.676313484 199.1469696 TQLS(ph)QAEVHK ddPTM_A459_MK2206_30min_R2 2 TQLSQAEVHK 10 0 A0A140TA76;K7EMZ9 A0A140TA76 LSM14A 1 T(0.218)QLS(0.782)QAEVHK;T(0.047)QLS(0.953)QAEVHK 98.943 0.012583 10448800 92613 92274 84641 97224 75149 62807 98122 56064 54500 103806 TRUE FALSE 99703.52249 87691.80734 87462.8887 89280.4882 72198.27267 65197.1644 85238.46353 63391.7573 59240.31149 100418.8187 0.992876871 0.873260694 0.870981055 0.889081243 0.718971539 0.649252453 0.848829578 0.631273681 0.589932368 1 16.61567013 -6.241996525 5.38741272 0.721774571 0.903084738 0.325649538 0.115958856 0.201433928 19.14840346 0.033938516 0.042445823 5.73E-07 6.241996525 0.181310167 TQLWASEPGT(ph)PPLPTSLPSQNPILK ddPTM_A459_MK2206_30min_R1 2 TQLWASEPGTPPLPTSLPSQNPILK 25 0 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;H7C3A1 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 TQLWAS(0.046)EPGT(0.954)PPLPTSLPSQNPILK;TQLWAS(0.041)EPGT(0.959)PPLPTSLPSQNPILK 163.01 2.78E-13 369010000 13893.3 14959.7 14527.1 11843.7 14472.1 12732.9 14726.9 13971.5 12691.7 11741 TRUE FALSE 12711.60188 13985.82081 13541.04093 12755.90383 13895.64561 13453.82579 13744.49537 13849.34865 14011.04763 13195.56372 0.963323898 1.059888089 1.026181315 0.966681234 1.053054338 1.019571886 1.041599712 1.049545813 1.061799854 1 13.68776536 -6.340245087 25 1.039371617 1.009587423 0.211964523 0.030866918 193.0286108 61233.54799 0.009434097 0.010697261 4.57E-07 6.340245087 -0.029784195 TQLWASEPGT(ph)PPLPTSLPSQNPILK ddPTM_A459_MK2206_30min_R2 2 TQLWASEPGTPPLPTSLPSQNPILK 25 0 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;H7C3A1 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 T(0.003)QLWAS(0.033)EPGT(0.964)PPLPTSLPSQNPILK;T(0.018)QLWAS(0.269)EPGT(0.711)PPLPTS(0.001)LPSQNPILK 86.918 0.00011263 167793000 253708 314060 289800 300170 314250 296004 313870 233881 293920 304330 TRUE FALSE 273132.0795 298464.2371 299461.7874 275645.1508 301910.966 307268.6396 272658.492 264450.0497 319484.6303 294399.737 0.927759251 1.013806059 1.01719448 0.936295506 1.025513708 1.043712344 0.926150596 0.898268634 1.085206915 1 18.16741686 -5.816990878 0.002493432 1.723653963 0.243467851 0.015686921 0.057678475 813716.007 464.8924598 136306.145 139676.6248 1.52E-06 5.816990878 -1.480186112 TQMAEVLPS(ph)PR ddPTM_A459_MK2206_30min_R1 3 TQMAEVLPSPR 11 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR 173.06 0.00021181 313800000 15261.1 14060 12657.4 12590.4 13137.6 11847.1 11583.7 11429.7 11352 10287.8 TRUE FALSE 13963.06331 13144.69144 11798.25095 13560.11479 12614.30157 12517.87256 10810.97251 11329.77134 12532.08102 11562.33033 1.207634007 1.136854861 1.020404245 1.172783894 1.090982631 1.082642703 0.935016748 0.979886494 1.083871561 1 13.49714458 -7.032162983 3.819594092 0.997946448 1.121594182 0.511621342 0.057822598 0.199056052 6.212428477 0.022966077 0.01836297 9.29E-08 7.032162983 0.123647734 TQMAEVLPS(ph)PR ddPTM_A459_MK2206_30min_R2 5 TQMAEVLPSPR 11 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR 183.06 3.29E-05 356383000 665380 782023 662017 831366 701150 812008 900414 645560 575306 676574 TRUE FALSE 716322.0044 743188.875 684088.3164 763440.7384 673619.328 842909.5334 782188.5602 729936.9085 625345.076 654497.4458 1.094461115 1.135510734 1.045211591 1.16645335 1.02921613 1.287872915 1.195097957 1.115263189 0.95545839 1 19.32002804 -10.47050163 6.91551645 0.999999994 1.119066529 0.128104261 0.088151834 8.59E-09 1.30E-09 0.086201518 0.020906938 3.38E-11 10.47050163 0.119066535 TQPDGTSVPGEPAS(ph)PISQR ddPTM_A459_MK2206_30min_R1 6 TQPDGTSVPGEPASPISQR 19 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR 314.94 2.95E-117 953880200 19815.9 18991.23 18615.83 15306.87 18553.7 16880.5 19098.5 16301.63 15560.19 14280.71 TRUE FALSE 18130.45365 17754.89748 17352.23933 16485.80778 17814.66684 17836.25932 17824.47391 16159.10657 17177.72743 16049.91217 1.129629462 1.106230195 1.081142323 1.027158754 1.109954164 1.111299497 1.1105652 1.006803427 1.070269248 1 13.97027778 -14.52287874 0.087079456 0.708711757 1.159274895 0.429467658 0.034105543 236.7592431 1.435355961 12.68789943 0.961000203 3.00E-15 14.52287874 0.450563138 TQPDGTSVPGEPAS(ph)PISQR ddPTM_A459_MK2206_30min_R2 6 TQPDGTSVPGEPASPISQR 19 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(0.999)PIS(0.001)QR;TQPDGTSVPGEPAS(0.966)PIS(0.034)QR;TQPDGTSVPGEPAS(0.999)PIS(0.001)QR;TQPDGTSVPGEPAS(0.654)PIS(0.346)QR 274.68 3.47E-59 1767653200 164082 198675 168041 208226 180440 163534 179948 152105 157995 183233 TRUE FALSE 176644.2441 188809.0884 173643.4031 191213.2697 173355.019 169757.401 156320.6114 171985.6458 171737.1195 177254.1222 0.996559301 1.065188702 0.979629703 1.078752174 0.97800275 0.957706364 0.881901134 0.97027727 0.96887518 1 17.43545965 -6.485860555 5.444579911 0.950831631 1.029318773 0.4453041 0.039010277 0.170152496 13.38528542 0.01212172 0.013351296 3.27E-07 6.485860555 0.078487142 TQPDVMS(ph)QNAR ddPTM_A459_MK2206_30min_R1 2 TQPDVMSQNAR 11 0 J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2;Q96Q15 J3KRA9 SMG1 Serine/threonine-protein kinase SMG1 1 TQPDVMS(1)QNAR;TQPDVMS(1)QNAR 132.97 0.0019106 13184200 4227.6 3387 4294.4 3151.3 3992.5 2867.6 3848.2 3428.7 2900 3221.9 TRUE FALSE 3868.02042 3166.505684 4002.908093 3394.013672 3833.470271 3029.961034 3591.493599 3398.723237 3201.465378 3621.053296 1.068203118 0.874470886 1.105454067 0.937300115 1.058661654 0.836762341 0.991836713 0.938600722 0.884125451 1 11.8221937 -6.74147217 24.99992872 0.930275762 1.002749679 0.207278835 0.076349693 409.5856987 512820.21 0.023476823 0.023448629 1.81E-07 6.74147217 0.072473917 TQPDVMS(ph)QNAR ddPTM_A459_MK2206_30min_R2 2 TQPDVMSQNAR 11 0 J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2;Q96Q15 J3KRA9 SMG1 Serine/threonine-protein kinase SMG1 1 TQPDVMS(1)QNAR;TQPDVMS(1)QNAR 135.04 0.0015303 17421100 63279 68089 61203 65594 77433 67189 75342 48904 52523 61461 TRUE FALSE 68123.68889 64707.79927 63243.47747 60234.76038 74392.59135 69745.92448 65449.5049 55295.92071 57091.3556 59455.5326 1.145792257 1.08833941 1.063710553 1.01310606 1.251230762 1.173077112 1.100814374 0.93003827 0.960236215 1 15.85952344 -7.710016582 6.264078298 0.958974893 1.120058337 0.567278671 0.062490489 0.147939176 12.75069258 0.032899561 0.018441493 1.95E-08 7.710016582 0.161083443 TQPPCFEGLTS(ph)K ddPTM_A459_MK2206_30min_R2 1 TQPPCFEGLTSK 12 0 M0R085;Q9NV72 M0R085 ZNF701 Zinc finger protein 701 1 TQPPCFEGLT(0.363)S(0.637)K 76.326 0.047968 4165000 16068 18609 20958 20788 20775 18191 20123 16478 20517 20118 TRUE FALSE 17298.17843 17684.90412 21656.72926 19089.5539 19959.26911 18883.27125 17480.82593 18631.73118 22301.53157 19461.55131 0.888838621 0.908709889 1.112795631 0.980885521 1.025574416 0.970286025 0.898223664 0.957361049 1.145927743 1 14.24833909 -5.033351817 24.1888981 1.004233297 0.893806345 0.296872549 0.068915691 471.0155086 341612.2264 0.017841596 0.047288089 9.26E-06 5.033351817 -0.110426952 TQPSMVSNPGSCS(ph)DPQPSPEMKPHSYLDAIR ddPTM_A459_MK2206_30min_R2 1 TQPSMVSNPGSCSDPQPSPEMKPHSYLDAIR 31 1 C9J494;Q9H000-2;Q9H000 C9J494 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 1 TQPSMVS(0.001)NPGS(0.256)CS(0.606)DPQPS(0.136)PEMKPHSYLDAIR 64.423 0.00025306 4005400 10066 13241 9140.9 10167 10408 9560.6 11289 8329.1 6665.2 10809 TRUE FALSE 10836.6607 12583.47119 9445.653044 9336.323577 9999.329624 9924.435332 9806.740739 9417.741968 7244.927048 10456.30322 1.036375904 1.203434037 0.903345365 0.892889522 0.956296831 0.949134233 0.937878382 0.900676059 0.692876526 1 13.35208526 -5.27555219 24.72070188 0.904863051 1.119904964 0.502302565 0.085908163 470.7938965 824666.0129 0.022203958 0.046594163 5.30E-06 5.27555219 0.215041912 TQPSSGVDSAVGTLPAT(ph)SPQSTSVQAK ddPTM_A459_MK2206_30min_R1 1 TQPSSGVDSAVGTLPATSPQSTSVQAK 27 0 Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 Q13428 TCOF1 Treacle protein 1 TQPSSGVDSAVGT(0.001)LPAT(0.487)S(0.487)PQS(0.014)T(0.008)S(0.003)VQAK 102.65 7.33E-07 5806500 1098.6 1020.8 944.01 905.04 1385.2 1158 1130.5 1122.9 889.63 999.11 TRUE FALSE 1005.158301 954.3457345 879.9332314 974.7463376 1330.024551 1223.564959 1055.086408 1113.082604 982.1102221 1122.88729 0.895155115 0.849903408 0.78363451 0.868071396 1.184468435 1.089659639 0.939619156 0.991268326 0.874629387 1 10.13299741 -6.029764321 24.40626708 1.014182838 0.840640674 0.493584511 0.081708257 446.9756755 366512.436 0.02572981 0.033277296 9.34E-07 6.029764321 -0.173542164 TQPSSGVDSAVGTLPAT(ph)SPQSTSVQAK ddPTM_A459_MK2206_30min_R2 1 TQPSSGVDSAVGTLPATSPQSTSVQAK 27 0 Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 Q13428 TCOF1 Treacle protein 1 TQPSSGVDSAVGTLPAT(0.499)S(0.499)PQS(0.001)T(0.001)S(0.001)VQAK 173.93 4.73E-22 11534000 36322 42473 36972 45431 44712 34981 45669 31878 35907 42860 TRUE FALSE 39102.84025 40363.85258 38204.62803 41719.14197 42956.38222 36312.22647 39672.60544 36044.56405 39030.12596 41461.48171 0.943112466 0.973526534 0.92144869 1.006214449 1.036055164 0.87580629 0.956854502 0.869350601 0.941358686 1 15.33948405 -6.771706947 24.99978809 0.922269723 0.974570094 0.203341005 0.045995785 313.2451001 762693.8465 0.015833188 0.014119049 1.69E-07 6.771706947 0.052300371 TQPSSGVDSAVGTLPATS(ph)PQSTSVQAK ddPTM_A459_MK2206_30min_R1 2 TQPSSGVDSAVGTLPATSPQSTSVQAK 27 0 Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 Q13428 TCOF1 Treacle protein 1 TQPSSGVDSAVGTLPAT(0.058)S(0.942)PQSTSVQAK;TQPSSGVDSAVGTLPAT(0.197)S(0.672)PQS(0.044)T(0.069)S(0.018)VQAK 200.16 3.58E-40 37782000 11246 10469.2 10726.6 9348.7 10434.3 9408.8 9401.5 10930.7 9838.8 8319.5 TRUE FALSE 10289.46864 9787.653177 9998.508278 10068.73849 10018.67974 9941.518125 8774.343089 10835.13404 10861.57847 9350.182469 1.100456454 1.046787398 1.069338306 1.076849412 1.071495639 1.063243221 0.938414102 1.158815251 1.161643476 1 13.1907788 TQPSSGVDSAVGTLPATS(ph)PQSTSVQAK ddPTM_A459_MK2206_30min_R2 3 TQPSSGVDSAVGTLPATSPQSTSVQAK 27 0 Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 Q13428 TCOF1 Treacle protein 1 TQPSSGVDSAVGTLPAT(0.277)S(0.64)PQS(0.028)T(0.044)S(0.012)VQAK;TQPSSGVDSAVGTLPAT(0.244)S(0.726)PQS(0.01)T(0.015)S(0.005)VQAK;TQPSSGVDSAVGTLPAT(0.039)S(0.944)PQS(0.005)T(0.008)S(0.003)VQAK 171.36 6.36E-22 57219000 170319 193217 178969 204281 197460 187018 221488 171434 160179 208098 TRUE FALSE 183358.7536 183622.1247 184935.7371 187590.5888 189706.7282 194135.101 192406.3595 193841.0124 174111.0799 201307.7793 0.910837893 0.912146194 0.918671587 0.931859611 0.942371571 0.964369592 0.955782038 0.962908702 0.864899908 1 17.6190434 -5.926240671 1.800470208 0.947868471 0.911883847 0.193364255 0.031918517 0.612967753 4.034061023 0.010114954 0.017714954 1.19E-06 5.926240671 -0.035984624 TQQLHPVLQKPSVFGNDS(ph)DDDDETSVSESLQR ddPTM_A459_MK2206_30min_R2 2 TQQLHPVLQKPSVFGNDSDDDDETSVSESLQR 32 1 Q9H0G5 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 1 TQQLHPVLQKPS(0.129)VFGNDS(0.87)DDDDET(0.001)SVSESLQR;TQQLHPVLQKPS(0.005)VFGNDS(0.992)DDDDET(0.002)S(0.001)VSESLQR 108.88 3.09E-12 27051000 140869 147803 142787 157279 137913 126935 166877 121956 113788 167675 TRUE FALSE 151654.0389 140463.3179 147547.4473 144428.8026 132497.8427 131765.6004 144965.8494 137896.0679 123685.0746 162203.7785 0.934959964 0.865968224 0.90964248 0.890415772 0.816860396 0.81234606 0.893726711 0.850140911 0.762528936 1 17.3074479 -6.100427447 6.716473636 0.848272718 0.899812966 0.106687922 0.060993916 0.496906401 28.47548042 0.017141271 0.022278753 7.94E-07 6.100427447 0.051540249 TQQS(ph)PISNGSPELGIK ddPTM_A459_MK2206_30min_R1 1 TQQSPISNGSPELGIK 16 0 Q15723-2;Q15723-3;Q15723-1;Q15723 Q15723-2 ELF2 ETS-related transcription factor Elf-2 1 T(0.004)QQS(0.775)PIS(0.212)NGS(0.01)PELGIK 170.79 9.06E-06 4909700 1146.3 1704.1 1262.7 1117.7 1244.4 1089 1165.4 1250 1232.8 1004.6 TRUE FALSE 1048.801166 1593.16278 1176.991442 1203.785448 1194.832913 1150.658239 1087.658292 1239.071382 1360.953972 1129.057432 0.928917463 1.411055571 1.042454891 1.066186195 1.058256984 1.019131716 0.963333008 1.097438754 1.205389498 1 10.14090316 TQQS(ph)PISNGSPELGIK ddPTM_A459_MK2206_30min_R2 1 TQQSPISNGSPELGIK 16 0 Q15723-2;Q15723-3;Q15723-1;Q15723 Q15723-2 ELF2 ETS-related transcription factor Elf-2 1 T(0.039)QQS(0.934)PIS(0.025)NGS(0.001)PELGIK 189.44 9.62E-07 6734300 26714 29126 24286 31435 25649 22198 24919 22110 21466 26544 TRUE FALSE 28759.24438 27679.64519 25095.68312 28866.65994 24641.89138 23042.76044 21647.10537 24999.85291 23333.07388 25677.87145 1.120001104 1.077957152 0.977327235 1.1241843 0.959654753 0.897378137 0.843025693 0.97359522 0.908684114 1 14.648238 -6.433831163 4.902328045 0.918589115 1.067428854 0.625698272 0.05501191 0.148625686 5.987596026 0.017351226 0.019542013 3.68E-07 6.433831163 0.148839738 TQQSPIS(ph)NGSPELGIK ddPTM_A459_MK2206_30min_R2 1 TQQSPISNGSPELGIK 16 0 Q15723-2;Q15723-3;Q15723-1;Q15723 Q15723-2 ELF2 ETS-related transcription factor Elf-2 1 TQQS(0.015)PIS(0.737)NGS(0.247)PELGIK 104.24 0.003971 7362600 35064 35929 28308 37030 38593 33095 36843 29187 25915 37481 TRUE FALSE 37748.5268 34144.81811 29251.77459 34004.53055 37077.64491 34354.45342 32005.46984 33001.84111 28169.03986 36257.99804 1.041108965 0.94171824 0.806767504 0.937849092 1.02260596 0.947500008 0.882714755 0.910194796 0.776905549 1 15.14601165 -7.261257947 22.25526472 0.884969999 0.945526828 0.111337952 0.077433738 8.266920497 1014341.857 0.031688331 0.022965327 5.48E-08 7.261257947 0.060556829 TQRLS(ph)AETWDLLR ddPTM_A459_MK2206_30min_R1 2 TQRLSAETWDLLR 13 1 A0A0A0MSK4;A0A0A0MRC4;Q86YR5-4;Q86YR5 A0A0A0MSK4 GPSM1 G-protein-signaling modulator 1 1 TQRLS(0.993)AET(0.007)WDLLR;T(0.063)QRLS(0.927)AET(0.01)WDLLR 112.03 0.0027765 4547100 1841.8 1988.17 2389.96 1640.96 2068.63 2165.92 2059.81 1557.47 1883.61 1980.88 TRUE FALSE 1685.145238 1858.739772 2227.736174 1767.347024 1986.232087 2288.552519 1922.403833 1543.853204 2079.418 2226.286369 0.756931032 0.834905966 1.000651221 0.793854307 0.892172774 1.027968616 0.863502494 0.693465686 0.934029884 1 11.12042346 -4.959375508 5.15395196 0.890658525 0.768807161 0.171894067 0.096985149 0.365812491 23.1931594 0.024709337 0.103127923 1.10E-05 4.959375508 -0.121851364 TQS(ph)APLPQNAQALQHLVIQQQHQQFLEK ddPTM_A459_MK2206_30min_R2 2 TQSAPLPQNAQALQHLVIQQQHQQFLEK 28 0 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 T(0.328)QS(0.672)APLPQNAQALQHLVIQQQHQQFLEK;T(0.208)QS(0.792)APLPQNAQALQHLVIQQQHQQFLEK 74.369 0.00034098 16722000 23645.9 31115 26234 26955 25632.6 25382 29820 19186.8 24183 30084.1 TRUE FALSE 25456.24828 29569.87435 27108.62847 24752.69028 24626.13533 26347.9298 25904.59818 21694.58064 26286.39363 29102.45828 0.874711271 1.016061051 0.931489299 0.850536063 0.846187463 0.905350659 0.890117183 0.745455261 0.903236193 1 14.8288534 -5.655614337 5.192891724 0.867254989 0.951626136 0.142234864 0.06826515 0.301583134 12.58825896 0.017975937 0.031622895 2.21E-06 5.655614337 0.084371148 TQS(ph)ASPPPKER ddPTM_A459_MK2206_30min_R1 1 TQSASPPPKER 11 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 T(0.014)QS(0.877)AS(0.109)PPPKER 114.71 0.030324 1364900 1248.5 1383.7 1277.4 1352.7 1408.2 1260.7 1072.7 1342.6 607.85 939 TRUE FALSE 1142.308519 1293.620879 1190.693647 1456.885188 1352.108412 1332.079745 1001.14214 1330.86179 671.0381827 1055.330409 1.082417894 1.225797028 1.128266216 1.380501477 1.281218091 1.262239516 0.948652793 1.261085418 0.63585601 1 10.04347904 -8.250158364 24.92737641 0.817927997 1.197907023 0.539081026 0.13993042 453.6892372 1002511.386 0.094650359 0.03507058 5.62E-09 8.250158364 0.379979026 TQS(ph)ASPPPKER ddPTM_A459_MK2206_30min_R2 1 TQSASPPPKER 11 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 T(0.126)QS(0.734)AS(0.14)PPPKER 63.76 0.04697 2384000 12636 18418 13446 20068 17112 15932 17697 12863 14407 16501 TRUE FALSE 13603.42188 17503.3889 13894.28293 18428.38021 16440.0969 16538.30342 15373.36264 14544.23827 15660.09482 15962.57372 0.852207301 1.096526739 0.87042874 1.154474243 1.029915174 1.036067473 0.963087965 0.911146192 0.981050744 1 13.96240566 -9.910130621 9.8139502 0.999998975 0.992540007 0 0.090860492 0 0 0.084604354 0.02051957 1.23E-10 9.910130621 -0.007458968 TQS(ph)GNFYTDTLGMAEFR ddPTM_A459_MK2206_30min_R1 1 TQSGNFYTDTLGMAEFR 17 0 H0YDJ2;E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 H0YDJ2 PPFIBP2 Liprin-beta-2 1 T(0.025)QS(0.879)GNFYT(0.095)DT(0.001)LGMAEFR 186.74 6.16E-08 24166000 1101.1 1087 997.49 968.08 1133.7 898.55 1018.9 1221.7 795.39 919.91 TRUE FALSE 1007.445663 1016.236102 929.783158 1042.641689 1088.542328 949.4251245 950.9310401 1211.018806 878.0736368 1033.875396 0.974436249 0.982938666 0.899318392 1.008479062 1.052875746 0.91831678 0.919773354 1.171339226 0.849303156 1 10.0138466 TQS(ph)GNFYTDTLGMAEFR ddPTM_A459_MK2206_30min_R2 4 TQSGNFYTDTLGMAEFR 17 0 H0YDJ2;E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 H0YDJ2 PPFIBP2 Liprin-beta-2 1 T(0.063)QS(0.926)GNFY(0.001)T(0.002)DT(0.008)LGMAEFR;T(0.017)QS(0.777)GNFY(0.106)T(0.095)DT(0.005)LGMAEFR;T(0.026)QS(0.974)GNFYT(0.001)DTLGMAEFR;T(0.021)QS(0.936)GNFY(0.012)T(0.014)DT(0.017)LGMAEFR 205.92 6.25E-09 60682000 61046 75178 81678 85634 81495 85846 96671 75854 64231.6 76657 TRUE FALSE 65719.7287 71444.76984 84401.10375 78637.42827 78295.09682 89112.92969 83977.98158 85768.37825 69818.34846 74155.68837 0.886239885 0.963442878 1.138160883 1.0604369 1.055820511 1.201700526 1.13245502 1.156598774 0.941510355 1 16.17826974 -5.075282681 3.6623639 1.094967555 0.896652794 0.443221168 0.073693194 0.191588366 4.795618575 0.018884539 0.066275029 8.41E-06 5.075282681 -0.198314761 TQS(ph)LPVTEK ddPTM_A459_MK2206_30min_R1 1 TQSLPVTEK 9 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.373)QS(0.626)LPVT(0.001)EK 137.01 0.0025907 13136000 5874.5 3760.7 4597.8 3510.3 3914.6 2995.7 3188.6 5009.8 4422.7 3692.3 TRUE FALSE 5374.842927 3515.877746 4285.714146 3780.663914 3758.673193 3165.313945 2975.894312 4965.999847 4882.455492 4149.729999 1.295227142 0.84725458 1.032769396 0.911062627 0.905763313 0.762775878 0.717129623 1.196704327 1.176571847 1 12.01880176 -10.49210528 6.896601404 1.000000002 0.967918704 0 0.182715599 7.26E-09 1.18E-09 0.182571102 0.044279993 3.22E-11 10.49210528 -0.032081298 TQS(ph)LPVTEK ddPTM_A459_MK2206_30min_R2 1 TQSLPVTEK 9 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.018)QS(0.701)LPVT(0.281)EK 92.112 0.026325 10904000 80454 63311 78642 65647 53647 61647 71140 44183 62201 77760 TRUE FALSE 86613.6201 60167.0678 81263.88503 60283.43011 51540.54923 63993.01978 61799.23255 49957.8698 67611.13055 75222.69757 1.151429328 0.799852568 1.0803107 0.801399472 0.685172839 0.850714237 0.821550337 0.66413292 0.898812895 1 16.19888042 -5.780191093 24.729895 0.799454874 0.989463005 0.325312048 0.124507355 224.5106996 296085.5931 0.032881563 0.04886933 1.66E-06 5.780191093 0.190008131 TQS(ph)LSALPK ddPTM_A459_MK2206_30min_R1 4 TQSLSALPK 9 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 T(0.001)QS(0.853)LS(0.147)ALPK;T(0.009)QS(0.513)LS(0.478)ALPK;T(0.017)QS(0.906)LS(0.076)ALPK;T(0.104)QS(0.83)LS(0.066)ALPK 142.19 0.0021411 134478000 25684.7 28109.4 27606.7 23339.3 23496.8 19527.3 23227.3 23210.5 22124.3 20828.2 TRUE FALSE 23500.08139 26279.47295 25732.83412 25136.89693 22560.8727 20632.91885 21677.8492 23007.57305 24424.20016 23408.55466 1.003909969 1.122643979 1.099291883 1.073833788 0.963787514 0.881426434 0.926065257 0.982870296 1.043387792 1 14.51474824 -6.25814225 5.683097241 0.958773891 1.080708318 0.532653563 0.049502997 0.126201574 16.31436237 0.015958072 0.019503499 5.52E-07 6.25814225 0.121934427 TQS(ph)LSALPK ddPTM_A459_MK2206_30min_R2 4 TQSLSALPK 9 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 T(0.009)QS(0.988)LS(0.003)ALPK;T(0.292)QS(0.667)LS(0.041)ALPK;T(0.144)QS(0.519)LS(0.337)ALPK;T(0.025)QS(0.889)LS(0.086)ALPK 108.98 0.011693 172026000 389260 431445 402091 396500 379297 298858 426859 318030 310253 356639 TRUE FALSE 419062.0449 410020.0687 415496.5133 364104.6817 364403.894 310231.2506 370811.9006 359597.613 337238.2451 345001.8986 1.214665909 1.188457427 1.204331092 1.055370081 1.056237358 0.899216068 1.074811188 1.042306186 0.97749678 1 18.39624478 -5.872910447 2.304223948 1.008400409 1.206417758 0.776002178 0.046566475 0.138035189 1.491143274 0.01429074 0.024360811 1.34E-06 5.872910447 0.19801735 TQS(ph)PEFEAQSSK ddPTM_A459_MK2206_30min_R2 2 TQSPEFEAQSSK 12 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 TQS(0.999)PEFEAQSSK;T(0.321)QS(0.678)PEFEAQS(0.001)SK 148.18 0.00060978 15908000 55096 58488 53337 62181 53694 48733 59756 49863 52088 61167 TRUE FALSE 59314.19212 55583.57097 55115.22896 57100.61339 51585.70377 50587.56846 51909.96542 56380.26531 56618.52009 59171.1258 1.00241784 0.93936984 0.931454797 0.965008061 0.871805345 0.854936724 0.877285411 0.952834082 0.956860619 1 15.85260572 -3.850628328 16.30983421 0.929128123 0.934546217 0 0.049599271 0 0 0.011955468 0 0.00014105 3.850628328 0.005418094 TQS(ph)PGGCSAEAVLAR ddPTM_A459_MK2206_30min_R1 4 TQSPGGCSAEAVLAR 15 0 Q96MH2;K7ESM2;K7ELS4;K7EJA3;K7ERG7 Q96MH2 HEXIM2 Protein HEXIM2 1 T(0.139)QS(0.861)PGGCSAEAVLAR;T(0.195)QS(0.805)PGGCSAEAVLAR;T(0.004)QS(0.996)PGGCSAEAVLAR;T(0.039)QS(0.921)PGGCS(0.04)AEAVLAR 208.07 1.69E-06 265075000 14782.6 14885.5 14978.1 12597 16442.7 14312.7 15687.9 14814.7 14176.5 12314.7 TRUE FALSE 13525.26224 13916.45124 13961.4283 13567.22312 15787.75244 15123.07271 14641.38882 14685.17664 15650.19791 13840.33801 0.977234966 1.005499377 1.008749085 0.980266748 1.140705699 1.092680879 1.05787798 1.061041763 1.13076703 1 13.75659156 -6.242902252 24.98483935 1.083041036 0.994964207 0.557937663 0.038131652 605.2350791 815752.1125 0.01090365 0.014048452 5.72E-07 6.242902252 -0.088076829 TQS(ph)PGGCSAEAVLAR ddPTM_A459_MK2206_30min_R2 3 TQSPGGCSAEAVLAR 15 0 Q96MH2;K7ESM2;K7ELS4;K7EJA3;K7ERG7 Q96MH2 HEXIM2 Protein HEXIM2 1 T(0.407)QS(0.593)PGGCSAEAVLAR;T(0.092)QS(0.908)PGGCSAEAVLAR;T(0.287)QS(0.713)PGGCSAEAVLAR 199.91 1.99E-05 199019000 290359 298189 276727 304707 310514 274314 329007 245232 226191 274826 TRUE FALSE 312589.1083 283381.3679 285952.9401 279811.4634 298321.6602 284753.2115 285807.9857 277284.6644 245864.6843 265858.4501 1.175772702 1.065910704 1.075583416 1.052482865 1.122107121 1.071070757 1.075038185 1.042978563 0.924795447 1 18.0202988 -8.027453239 3.155401225 0.963293371 1.088297176 0.642116848 0.037887736 0.157135697 3.066154251 0.027397932 0.009807139 9.39E-09 8.027453239 0.125003805 TQS(ph)PHSPKEESER ddPTM_A459_MK2206_30min_R2 1 TQSPHSPKEESER 13 1 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 T(0.155)QS(0.675)PHS(0.17)PKEESER 67.646 0.038096 4177600 3738.4 3678.4 3881.8 3886.5 4189.5 2084.8 3663.2 3023.9 3196.5 3636.7 TRUE FALSE 4024.614778 3495.736005 4011.217275 3568.960518 4024.999179 2164.138525 3182.21744 3419.134113 3474.525792 3518.034777 1.143995166 0.993661583 1.140186931 1.014475622 1.144104432 0.615155524 0.904544054 0.971887525 0.987632588 1 11.78055403 TQS(ph)SLTVSEVLTR ddPTM_A459_MK2206_30min_R1 1 TQSSLTVSEVLTR 13 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 T(0.03)QS(0.787)S(0.076)LT(0.107)VS(0.001)EVLTR 179.81 0.00011051 76314000 1802.1 2252.7 2246.7 1938.2 1540.4 1676.9 1942.4 1646 2103.6 2421 TRUE FALSE 1648.821932 2106.048821 2094.200264 2087.4805 1479.042606 1771.844629 1812.82604 1631.609196 2322.276748 2720.931758 0.605976952 0.774017509 0.769662913 0.767193258 0.543579457 0.651190396 0.666251932 0.599650907 0.853485848 1 11.40988506 -8.498600313 4.100319038 0.999150802 0.677638845 0.668965271 0.075009941 0.112865321 4.909200823 0.077075366 0.020189014 3.17E-09 8.498600313 -0.321511957 TQS(ph)SLTVSEVLTR ddPTM_A459_MK2206_30min_R2 1 TQSSLTVSEVLTR 13 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 TQS(0.452)S(0.452)LT(0.095)VSEVLTR 139 0.00095779 15530000 15878 25799 30243 25013 24808 22453 32180 19984 21665 26015 TRUE FALSE 17093.63189 24517.85918 31251.28653 22969.35789 23833.91327 23307.46465 27954.72734 22595.97742 23549.38254 25166.13268 0.679231573 0.974240241 1.241799323 0.912709083 0.947063006 0.926144074 1.110807437 0.897872458 0.935756909 1 14.61919591 -4.767122054 5.800925867 0.997057302 0.667288761 0.469546751 0.100582156 0.120559903 14.43519034 0.025485422 0.157823603 1.71E-05 4.767122054 -0.32976854 TQS(ph)SSSLTR ddPTM_A459_MK2206_30min_R2 2 TQSSSSLTR 9 0 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 T(0.211)QS(0.345)S(0.176)S(0.176)S(0.091)LTR;T(0.006)QS(0.386)S(0.157)S(0.157)S(0.294)LTR 93.839 0.024036 16737900 29776 54615 37117 42686 37449 52068 59538 60448 28708 32557 TRUE FALSE 32055.67345 51902.89852 38354.46225 39198.41725 35978.56409 54049.48423 51720.58908 68348.76115 31204.96995 31494.66776 1.01781272 1.647990032 1.217808124 1.244604882 1.142370016 1.716147147 1.642201451 2.170169302 0.990801687 1 14.94281997 -6.761504119 25 1.585645602 1.273453347 0.085786475 0.358532945 3.35726265 1295884.77 0.117125482 0.109972234 1.73E-07 6.761504119 -0.312192255 TQSAS(ph)PPPK ddPTM_A459_MK2206_30min_R1 1 TQSASPPPK 9 0 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 T(0.01)QS(0.007)AS(0.983)PPPK 89.266 0.030097 13734000 6197.4 6037 5606.5 4916 3988 4443.9 5843.4 6052.3 1397.8 5517.1 TRUE FALSE 5670.278586 5643.990203 5225.946401 5294.631172 3829.149515 4695.509778 5453.597448 5999.385379 1543.106312 6200.6 0.914472565 0.910232913 0.842813018 0.853890135 0.617544998 0.757267003 0.879527376 0.967549169 0.248864031 1 12.59819211 -6.024711843 21.77182044 0.749456149 0.884124491 0.100691872 0.19965436 369.5902819 325620.3655 0.057176956 0.07435838 9.45E-07 6.024711843 0.134668341 TQSAS(ph)PPPK ddPTM_A459_MK2206_30min_R2 3 TQSASPPPK 9 0 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 TQS(0.001)AS(0.999)PPPK;TQS(0.016)AS(0.983)PPPK;T(0.001)QS(0.064)AS(0.935)PPPK 133.05 0.0032161 84477200 506847 385735 374321 417321 348807 310137 455421 454081 298982 465839 TRUE FALSE 545651.596 366579.9608 386800.6753 383224.5394 335111.0846 321939.4809 395623.6756 513430.9458 324986.9139 450638.7116 1.210840485 0.813467533 0.858338765 0.85040306 0.743635813 0.714407068 0.877917643 1.139340524 0.721169544 1 18.78161173 -10.38354452 15.20320881 0.999999999 0.876060933 0.046941531 0.159357146 0 0 0.153370396 0.037197785 4.13E-11 10.38354452 -0.123939067 TQSAS(ph)PPPKER ddPTM_A459_MK2206_30min_R1 2 TQSASPPPKER 11 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 TQSAS(0.999)PPPKER;T(0.012)QS(0.002)AS(0.986)PPPKER 172.33 0.0012046 20617300 7119.1 7168.1 6953.9 6404.9 6638 5826.2 6096 6767.8 2812.3 4126.1 TRUE FALSE 6513.583161 6701.455387 6481.888643 6898.206508 6373.594404 6156.074409 5689.346963 6708.629838 3104.648649 4637.272418 1.404615165 1.445128684 1.397780432 1.487556884 1.374427428 1.327520545 1.226873569 1.446675811 0.669498871 1 12.17906077 -8.254747949 24.9994895 0.834749419 1.386367449 0.828801605 0.100723334 174.026264 650176.0949 0.070132245 0.025163377 5.56E-09 8.254747949 0.55161803 TQSAS(ph)PPPKER ddPTM_A459_MK2206_30min_R2 3 TQSASPPPKER 11 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 T(0.003)QS(0.001)AS(0.995)PPPKER;T(0.006)QS(0.242)AS(0.752)PPPKER;T(0.01)QS(0.394)AS(0.596)PPPKER 112.08 0.023757 56079000 171172 256895 238927 253859 260425 231169 248878 227592 217912 221488 TRUE FALSE 184277.0599 244137.9679 246892.7069 233117.9076 250199.406 239966.2983 216200.0196 257339.0558 236865.5919 214260.8647 0.86005935 1.139442652 1.152299592 1.08800974 1.167732644 1.119972603 1.009050439 1.201054874 1.105500961 1 17.70900884 -4.758130547 24.98619834 1.11522846 0.860058994 0.597050579 0.061231389 60.33583565 455543.7974 0.014402177 0.101201407 1.75E-05 4.758130547 -0.255169467 TQSEESRPQSLQQPATSTTETPAS(ph)PAHTTPQTQSTSGR ddPTM_A459_MK2206_30min_R1 1 TQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGR 38 1 B8ZZU6;E9PBF9;P15336-5;P15336;P15336-4;F5H629;P15336-2 B8ZZU6 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 TQSEESRPQS(0.001)LQQPAT(0.025)S(0.025)T(0.025)T(0.025)ET(0.052)PAS(0.805)PAHT(0.015)T(0.015)PQT(0.009)QS(0.001)T(0.001)SGR 52.602 0.00096817 5668400 436.31 296.83 278.9 313.21 408.25 289.93 628.48 373.4 292.9 262.84 TRUE FALSE 399.1995433 277.506313 259.9690451 337.3334885 391.988538 306.345586 586.5552459 370.1354032 323.3480032 295.4026035 1.351374492 0.939417289 0.880049945 1.141944873 1.326963721 1.037044299 1.985612987 1.252986259 1.094601061 1 8.206538731 -6.132688558 3.543708838 1.319211291 1.040764605 0.104920292 0.285449312 0.473439558 10.82920335 0.088371798 0.118234696 7.37E-07 6.132688558 -0.278446685 TQSEESRPQSLQQPATSTTETPAS(ph)PAHTTPQTQSTSGR ddPTM_A459_MK2206_30min_R2 2 TQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGR 38 1 B8ZZU6;E9PBF9;P15336-5;P15336;P15336-4;F5H629;P15336-2 B8ZZU6 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 TQSEESRPQSLQQPAT(0.001)S(0.004)T(0.004)T(0.004)ET(0.011)PAS(0.938)PAHT(0.019)T(0.019)PQT(0.001)QSTSGR;TQSEESRPQSLQQPAT(0.002)S(0.002)T(0.002)T(0.002)ET(0.005)PAS(0.797)PAHT(0.075)T(0.032)PQT(0.049)QS(0.021)T(0.009)S(0.004)GR 81.31 2.44E-07 44800000 16643.1 35399 25528 33542 33210 49029 34950 21266.3 30664 23102 TRUE FALSE 17917.30853 33641.13713 26379.09078 30801.5113 31906.00853 50894.83295 30361.02302 24045.87843 33331.09929 22348.18363 0.801734442 1.505318629 1.180368446 1.378255692 1.427677929 2.277358813 1.358545442 1.075965672 1.491445562 1 14.44786996 -4.757294532 24.97252091 1.430718163 0.80173351 0.22943602 0.332876316 189.014649 1138650.713 0.085482575 0.6425923 1.75E-05 4.757294532 -0.628984653 TQSGNFYT(ph)DTLGMAEFR ddPTM_A459_MK2206_30min_R1 2 TQSGNFYTDTLGMAEFR 17 0 H0YDJ2;E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 H0YDJ2 PPFIBP2 Liprin-beta-2 1 T(0.001)QS(0.411)GNFYT(0.58)DT(0.008)LGMAEFR;TQS(0.014)GNFYT(0.776)DT(0.209)LGMAEFR 229.69 5.48E-16 69357000 3635.4 3328.3 4046.5 2987.7 2914.6 2808.1 2888.3 3625.4 2926.7 2557.1 TRUE FALSE 3326.19014 3111.627065 3771.834854 3217.813172 2798.50531 2967.092195 2695.626777 3593.70351 3230.940938 2873.892853 1.157381402 1.082722016 1.312447975 1.119670543 0.973768144 1.032429651 0.937970521 1.250465377 1.124238482 1 11.48879056 -6.000149667 24.99992367 1.05776912 1.181041229 0.268457709 0.09717584 8.120290267 1357087.093 0.028743048 0.042147315 1.00E-06 6.000149667 0.12327211 TQSGNFYTDT(ph)LGMAEFR ddPTM_A459_MK2206_30min_R2 1 TQSGNFYTDTLGMAEFR 17 0 H0YDJ2;E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 H0YDJ2 PPFIBP2 Liprin-beta-2 1 TQSGNFY(0.006)T(0.008)DT(0.986)LGMAEFR 99.539 0.048363 8015300 33359 41248 39565 47892 37764 42448 37741 32278 36248 44675 TRUE FALSE 35912.99069 39199.6843 40884.07735 43979.0704 36281.19561 44063.38838 32785.56136 36496.84543 39400.78552 43217.25841 0.830987249 0.907037738 0.946012747 1.017627495 0.839507108 1.01957852 0.758621962 0.844497008 0.911691 1 15.39931993 -7.253052974 24.96984977 0.865743908 0.926928977 0.068364665 0.081535141 1391.401267 4142795.603 0.030678963 0.023337731 5.58E-08 7.253052974 0.061185069 TQSLPVT(ph)EK ddPTM_A459_MK2206_30min_R1 1 TQSLPVTEK 9 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.01)QS(0.003)LPVT(0.987)EK 102.06 0.03851 13532000 5759.1 3817.9 4855.9 3560.6 3732.6 3124.6 4180.6 4850.1 3914 4392.9 TRUE FALSE 5269.258303 3569.354016 4526.295037 3834.838029 3583.922638 3301.512152 3901.719802 4807.696087 4320.874306 4937.125617 1.06727248 0.722961961 0.916787497 0.776734952 0.725912791 0.668711394 0.790281655 0.973784437 0.875180144 1 12.26945564 -7.756524493 24.99148783 0.943361731 0.800657555 0.246983642 0.110934657 167.7294311 852893.0624 0.054054837 0.029937264 1.75E-08 7.756524493 -0.142704176 TQSLPVT(ph)EK ddPTM_A459_MK2206_30min_R2 2 TQSLPVTEK 9 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.001)QS(0.007)LPVT(0.992)EK;T(0.031)QS(0.01)LPVT(0.96)EK 119.34 0.016205 29920300 185730 142378 196254 175812 141953 127399 172553 98443 129754 197671 TRUE FALSE 199949.6316 135307.7156 202797.0104 161447.5972 136379.212 132247.2582 149896.5838 111309.8381 141039.7684 191221.0115 1.045646763 0.707598577 1.060537275 0.844298417 0.713202022 0.69159376 0.783891805 0.582100457 0.737574638 1 17.54488153 -6.086045457 4.400892459 0.730306245 0.920210307 0.268047585 0.134424827 0.27419774 9.436331551 0.037853085 0.050577076 8.20E-07 6.086045457 0.189904063 TQSPHS(ph)PKEESER ddPTM_A459_MK2206_30min_R2 1 TQSPHSPKEESER 13 1 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 T(0.023)QS(0.001)PHS(0.972)PKEES(0.003)ER 68.261 0.037079 4927300 2663.6 4100.8 4416.1 4519.5 4328.8 3327.2 4207.8 2163.5 3846.7 3959.1 TRUE FALSE 2867.527264 3897.160235 4563.33057 4150.242393 4158.829562 3453.818927 3655.310806 2446.276878 4181.279013 3829.914891 0.748718273 1.017557921 1.1914966 1.083638282 1.085880412 0.901800438 0.954410453 0.638728783 1.091742018 1 11.90309662 -6.776038047 23.69306589 0.897073923 1.037475945 0.102935385 0.151827375 240.9384532 391029.5515 0.053617055 0.047525921 1.67E-07 6.776038047 0.140402022 TQSS(ph)ASLAASYAAQQHPQAAASYR ddPTM_A459_MK2206_30min_R1 1 TQSSASLAASYAAQQHPQAAASYR 24 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 T(0.129)QS(0.339)S(0.524)AS(0.007)LAASYAAQQHPQAAASYR 115.08 1.00E-07 3744100 527.06 701.62 515.2 462.6 689.34 501.71 564.54 542.07 512.23 549.23 TRUE FALSE 482.2307793 655.9444105 480.2296594 498.2295322 661.8821281 530.1163866 526.8805667 537.3307391 565.4781415 617.2727589 0.781228027 1.062649211 0.777986154 0.807146476 1.072268488 0.858804117 0.853561994 0.87049158 0.916091199 1 9.269764314 -8.620551305 5.111276655 0.999995545 0.88962226 0.108518692 0.0984536 1.978829018 100.8385642 0.091998936 0.023914294 2.40E-09 8.620551305 -0.110373285 TQSS(ph)ASLAASYAAQQHPQAAASYR ddPTM_A459_MK2206_30min_R2 1 TQSSASLAASYAAQQHPQAAASYR 24 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 T(0.264)QS(0.264)S(0.437)AS(0.035)LAASYAAQQHPQAAASYR 140.73 2.64E-08 4923900 3186.5 5439.1 5923.7 4326.5 4159.7 3524 5452.4 1588.7 4268.8 4994.4 TRUE FALSE 3430.46089 5169.002203 6121.193201 3973.01111 3996.369277 3658.108289 4736.49333 1796.348545 4640.092508 4831.433137 0.710029673 1.069869344 1.26695186 0.822325591 0.827160216 0.757147659 0.980349556 0.371804492 0.960396714 1 12.23823548 -5.966116065 24.84180503 0.793152776 1.024975211 0.151284656 0.211079385 274.9474852 201574.291 0.058181437 0.086296549 1.08E-06 5.966116065 0.231822435 TQSS(ph)LTVSEVLTR ddPTM_A459_MK2206_30min_R2 1 TQSSLTVSEVLTR 13 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 T(0.014)QS(0.134)S(0.844)LT(0.009)VSEVLTR 124.04 0.0023364 16017000 25649 18823 31437 35541 24417 26877 32054 28465 26287 28919 TRUE FALSE 27612.70716 17888.27719 32485.09389 32637.18661 23458.26589 27899.82307 27845.2713 32185.47323 28573.39574 27975.3754 0.987036162 0.639429389 1.161203145 1.166639809 0.838532658 0.997299327 0.995349335 1.150492988 1.021376669 1 14.77186987 -5.269741046 24.99907279 1.040749852 0.813232769 0.357426394 0.122349061 585.7716633 1763956.129 0.031900351 0.068175066 5.37E-06 5.269741046 -0.227517083 TQSS(ph)SCERDSPSTSR ddPTM_A459_MK2206_30min_R2 1 TQSSSCERDSPSTSR 15 1 Q5JS79;A0A2U3TZM1;A0A2R8YE77;A0A2R8YEK3;O14936-6;O14936-2;O14936 Q5JS79 CASK Peripheral plasma membrane protein CASK 1 T(0.058)QS(0.17)S(0.502)S(0.011)CERDS(0.242)PS(0.013)T(0.004)SR 70.272 0.028705 44756000 12095 9488.1 11574 13724 10862 14054 13445 11970 13209 12142 TRUE FALSE 13021.0025 9016.934751 11959.87138 12602.7053 10435.5033 14588.83482 11679.65535 13534.5201 14357.89494 11745.80753 1.108565968 0.767672612 1.018224703 1.0729535 0.888444943 1.242046132 0.994368017 1.152285193 1.22238466 1 13.51985828 -6.752634028 24.99798723 1.123744083 0.968135339 0.294733117 0.116766084 240.1778942 681852.781 0.037583215 0.037045266 1.77E-07 6.752634028 -0.155608744 TQSSS(ph)CEDLPSTTQPK ddPTM_A459_MK2206_30min_R1 4 TQSSSCEDLPSTTQPK 16 0 Q5JS72;A0A2U3TZM4;A0A2R8Y6F8;A0A2R8YFN5;O14936-5;O14936-3;O14936-4 Q5JS72 CASK Peripheral plasma membrane protein CASK 1 TQS(0.004)S(0.436)S(0.56)CEDLPSTTQPK;TQSS(0.021)S(0.979)CEDLPSTTQPK;TQS(0.027)S(0.12)S(0.853)CEDLPSTTQPK;TQSS(0.015)S(0.521)CEDLPS(0.464)TTQPK 260.58 4.17E-39 58729000 19022.7 17497 16321.1 14845.9 16093.9 14620 15334.3 15403.3 16102 14619.6 TRUE FALSE 17404.71947 16357.94212 15213.26921 15989.33379 15452.84588 15447.77177 14311.37683 15268.63057 17775.86052 16430.78642 1.05927489 0.995566597 0.925900247 0.973132593 0.940481209 0.940172392 0.871009851 0.929269615 1.081863038 1 14.00411391 -4.900528825 2.953415469 0.951494528 1.064725182 0.251865311 0.052742575 0.411187726 6.060633059 0.013700447 0.097457742 1.26E-05 4.900528825 0.113230654 TQSSS(ph)CEDLPSTTQPK ddPTM_A459_MK2206_30min_R2 2 TQSSSCEDLPSTTQPK 16 0 Q5JS72;A0A2U3TZM4;A0A2R8Y6F8;A0A2R8YFN5;O14936-5;O14936-3;O14936-4 Q5JS72 CASK Peripheral plasma membrane protein CASK 1 TQS(0.001)S(0.049)S(0.95)CEDLPSTTQPK;TQS(0.001)S(0.008)S(0.991)CEDLPSTTQPK 265.37 8.27E-40 84292000 149629 136264 126895 143494 132404 120151 176411 133961 136930 138899 TRUE FALSE 161084.7113 129497.3279 131125.616 131770.0812 127205.1537 124723.4305 153248.0238 151470.1627 148839.9239 134366.737 1.198843664 0.963760308 0.975878546 0.980674861 0.946701219 0.928231445 1.140520543 1.127289134 1.107714061 1 17.03581651 -7.270703762 24.89239461 1.104488365 0.993149321 0.25024264 0.07921234 798.6054614 2145756.777 0.032683551 0.022388525 5.36E-08 7.270703762 -0.111339044 TQSSSCERDS(ph)PSTSR ddPTM_A459_MK2206_30min_R1 2 TQSSSCERDSPSTSR 15 1 Q5JS79;A0A2U3TZM1;A0A2R8YE77;A0A2R8YEK3;O14936-6;O14936-2;O14936 Q5JS79 CASK Peripheral plasma membrane protein CASK 1 TQS(0.044)S(0.204)S(0.106)CERDS(0.386)PS(0.057)T(0.193)S(0.009)R;TQSS(0.003)S(0.019)CERDS(0.582)PS(0.362)T(0.032)S(0.002)R 109.36 0.017875 24552300 634.3 702.64 741.32 729.58 783.43 909.87 764.12 762.05 345.83 760.84 TRUE FALSE 580.3494542 656.8980083 691.0012638 785.772378 752.2243242 961.3860531 713.146949 755.3874772 381.7802661 855.0986032 0.678693021 0.76821317 0.808095419 0.918926046 0.87969308 1.124298472 0.833993818 0.883392248 0.446475137 1 9.73994698 -5.117657031 1.704175209 0.873047429 0.67382433 0.118112891 0.163429318 1.178300349 5.263852055 0.047430934 0.309903328 7.63E-06 5.117657031 -0.199223099 TQSSSCERDS(ph)PSTSR ddPTM_A459_MK2206_30min_R2 1 TQSSSCERDSPSTSR 15 1 Q5JS79;A0A2U3TZM1;A0A2R8YE77;A0A2R8YEK3;O14936-6;O14936-2;O14936 Q5JS79 CASK Peripheral plasma membrane protein CASK 1 TQSS(0.001)SCERDS(0.903)PS(0.086)T(0.009)S(0.001)R 72.676 0.02492 46635000 12714 14401 11540 14330 12341 17344 16366 13378 14745 14149 TRUE FALSE 13687.39362 13685.86728 11924.73784 13159.19316 11856.43033 18004.03807 14217.12454 15126.55053 16027.49345 13687.31929 1.00000543 0.999893916 0.871225226 0.961414933 0.866234657 1.315380879 1.038707744 1.105150703 1.170973885 1 13.7405523 -6.736779638 24.9999035 1.127156271 0.94049202 0.521346444 0.089244035 181.9417372 184451.0526 0.028379012 0.028366845 1.83E-07 6.736779638 -0.186664251 TQT(ph)PPLGQTPQLGLK ddPTM_A459_MK2206_30min_R1 2 TQTPPLGQTPQLGLK 15 0 P78344-2;P78344;H0Y3P2;D3DQV9;E9PKF8 P78344-2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 T(0.003)QT(0.996)PPLGQT(0.001)PQLGLK;T(0.03)QT(0.959)PPLGQT(0.011)PQLGLK 142.19 0.00089433 902610000 11844.4 11851.4 13658.6 10830.7 11200.2 9079.1 11961.5 13001.8 13104.5 12395.6 TRUE FALSE 10836.97158 11079.87171 12731.49229 11664.88239 10754.07232 9593.150796 11163.57016 12888.12663 14466.75967 13931.26051 0.777888804 0.795324422 0.913879421 0.837317081 0.771938211 0.688606088 0.801332381 0.925122793 1.038438672 1 13.76603818 -7.938252146 3.04177411 1.014879649 0.798502479 0.735823939 0.053991244 0.149213379 2.721297182 0.042269243 0.01663813 1.15E-08 7.938252146 -0.21637717 TQT(ph)PPLGQTPQLGLK ddPTM_A459_MK2206_30min_R2 3 TQTPPLGQTPQLGLK 15 0 P78344-2;P78344;H0Y3P2;D3DQV9;E9PKF8 P78344-2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 T(0.064)QT(0.936)PPLGQTPQLGLK;T(0.003)QT(0.997)PPLGQTPQLGLK;T(0.008)QT(0.992)PPLGQTPQLGLK 190.18 6.34E-05 621566000 139027 150443 138363 144059 162073 125150 183667 126685 130118 168604 TRUE FALSE 149671.014 142972.2194 142975.9534 132288.9189 155709.1997 129912.6709 159551.3023 143243.1645 141435.4284 163102.4653 0.917650225 0.876579144 0.876602037 0.811078598 0.954671037 0.796509548 0.978227411 0.878240339 0.867156902 1 17.31541906 -14.52287871 0.342090581 2.272945953 0.879743995 0.295853938 0.053400893 491.6224624 4.121052013 457.456399 0.040013987 3.00E-15 14.52287871 -1.393201958 TQT(ph)PPVEENVTQK ddPTM_A459_MK2206_30min_R1 1 TQTPPVEENVTQK 13 0 Q6P1Q9-2;Q6P1Q9 Q6P1Q9-2 METTL2B Methyltransferase-like protein 2B 1 T(0.141)QT(0.859)PPVEENVTQK 186.08 0.00030516 7836400 2765.2 3043.8 2638.9 2296.7 2260.3 2183.6 2092.2 1994 2341.7 2057.5 TRUE FALSE 2530.005219 2845.648067 2459.77882 2473.592232 2170.267465 2307.233545 1952.633155 1976.566668 2585.128095 2312.398633 1.09410427 1.230604458 1.063734767 1.069708396 0.938535179 0.99776635 0.84441892 0.854769 1.117942234 1 11.17517441 -5.916433028 1.453192874 0.944906131 1.158490761 0.469152136 0.082902702 0.333111772 1.429019923 0.028248471 0.054682324 1.21E-06 5.916433028 0.21358463 TQT(ph)PPVEENVTQK ddPTM_A459_MK2206_30min_R2 2 TQTPPVEENVTQK 13 0 Q6P1Q9-2;Q6P1Q9 Q6P1Q9-2 METTL2B Methyltransferase-like protein 2B 1 T(0.145)QT(0.855)PPVEENVTQK;TQT(1)PPVEENVTQK 172.26 0.00042148 30023000 73231 76128 78974 71661 75961 55989 77182 61663 64119 75246 TRUE FALSE 78837.62167 72347.59422 81606.95374 65806.06707 72978.38947 58119.70063 67047.91069 69722.56582 69695.95472 72790.72918 1.083072289 0.993912206 1.12111741 0.90404462 1.002578079 0.798449216 0.921105084 0.957849531 0.957483948 1 16.1514671 -5.771648984 24.99942959 0.92935471 1.058821797 0.483265879 0.062034378 168.742718 413186.7205 0.017235467 0.025898564 1.69E-06 5.771648984 0.129467086 TQT(ph)PPVS(ph)PAPQPTEER ddPTM_A459_MK2206_30min_R2 2 TQTPPVSPAPQPTEER 16 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 T(0.103)QT(0.897)PPVS(0.794)PAPQPT(0.206)EER;T(0.502)QT(0.498)PPVS(0.753)PAPQPT(0.247)EER 170.48 0.0016357 297540000 148542 102815 95838 94838 66362 62512 85903 85870 74446 84840 TRUE FALSE 159914.4897 97709.35661 99033.19109 87089.43203 63756.29444 64890.93796 74623.83291 97093.50384 80921.17851 82071.67775 1.948473507 1.190536849 1.206667072 1.061138683 0.776836738 0.79066177 0.909251949 1.183033008 0.985981775 1 16.32459683 -1.976150628 0.904714877 0.953896845 199.9999198 0.840825721 0.126612631 146.6960155 0.804221714 0.046541305 59648.28995 0.01056451 1.976150628 199.046023 TQT(ph)PPVSPAPQPT(ph)EERLPSSPVYEDAASFK ddPTM_A459_MK2206_30min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 T(0.456)QT(0.516)PPVS(0.086)PAPQPT(0.902)EERLPS(0.016)S(0.006)PVY(0.017)EDAASFK 73.791 0.00012784 6181300 1775.3 1674.8 1629.8 1761.6 1525.7 1248.2 1258.4 1824.8 1124.7 839.61 TRUE FALSE 1624.301413 1565.770216 1519.173717 1897.278737 1464.928138 1318.872005 1174.454432 1808.845966 1241.61659 943.6272255 1.721338012 1.659310131 1.609929934 2.010623142 1.552443697 1.397662095 1.244616942 1.916907352 1.315791402 1 9.882073234 -6.511633165 16.33766007 1.429804096 1.739746072 0.344094898 0.238193796 7.654416456 11120.91227 0.074398141 0.079584673 3.08E-07 6.511633165 0.309941976 TQT(ph)PPVSPAPQPTEER ddPTM_A459_MK2206_30min_R1 3 TQTPPVSPAPQPTEER 16 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 T(0.13)QT(0.869)PPVS(0.001)PAPQPTEER;T(0.264)QT(0.736)PPVSPAPQPTEER;T(0.069)QT(0.93)PPVSPAPQPTEER 200.71 1.59E-06 214071000 6896.1 7351.4 7486.6 5674.6 6243.4 5991.3 8518 5603.4 9723 11553.9 TRUE FALSE 6309.550482 6872.822524 6978.430451 6111.658675 5994.712157 6330.522228 7949.779762 5554.410065 10733.74064 12985.28436 0.485900063 0.529277783 0.537410676 0.470660365 0.461654284 0.487515102 0.61221453 0.42774651 0.826608055 1 13.66458999 -8.43533459 3.588642251 0.9966763 0.504955465 0.918875754 0.050070437 0.052463711 1.24789841 0.047225017 0.012490157 3.67E-09 8.43533459 -0.491720835 TQT(ph)PPVSPAPQPTEER ddPTM_A459_MK2206_30min_R2 5 TQTPPVSPAPQPTEER 16 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 T(0.14)QT(0.859)PPVS(0.001)PAPQPTEER;TQT(0.998)PPVS(0.002)PAPQPTEER;T(0.004)QT(0.937)PPVS(0.057)PAPQPT(0.002)EER;T(0.004)QT(0.995)PPVS(0.001)PAPQPTEER;T(0.011)QT(0.989)PPVSPAPQPTEER 174.18 7.78E-06 883976100 731403 612230 751794 739276 568406 570324 815076 669164 556971 848237 TRUE FALSE 787399.776 581827.5485 776858.4367 678874.786 546087.5244 592028.0795 708055.5421 756626.0324 605415.3308 820559.0962 0.959589358 0.709062335 0.946742825 0.827331985 0.665506637 0.721493531 0.862894026 0.922085973 0.737808323 1 19.64624771 -10.10180043 7.616318599 1 0.815078303 0.230726039 0.10022273 7.17E-11 0 0.097244785 0.023585325 7.91E-11 10.10180043 -0.184921697 TQT(ph)PPVSPAPQPTEERLPSSPVYEDAASFK ddPTM_A459_MK2206_30min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 T(0.098)QT(0.564)PPVS(0.076)PAPQPT(0.262)EERLPSSPVYEDAASFK 91.354 1.22E-06 47273000 2148.5 2333.2 2213.4 2304.7 2310.6 1625.9 2013.2 2246.9 1643.9 1318.2 TRUE FALSE 1965.758793 2181.308256 2063.160575 2482.208393 2218.563909 1717.957053 1878.903101 2227.25559 1814.789288 1481.508568 1.326862926 1.472356153 1.392607927 1.675460033 1.497503259 1.159599809 1.268236406 1.503370037 1.224960373 1 10.53285125 -6.746352408 24.94542918 1.265006646 1.479710886 0.400927594 0.14470944 274.2027785 453377.489 0.048230269 0.048050666 1.79E-07 6.746352408 0.21470424 TQTCTSSSLS(ph)PTK ddPTM_A459_MK2206_30min_R1 2 TQTCTSSSLSPTK 13 0 A0A2R8YCF6;A0A2R8YD00;R4GN03;A0A2R8Y500;A0A2U3TZI0;Q9BZR9 A0A2R8YCF6 TRIM8 Probable E3 ubiquitin-protein ligase TRIM8 1 TQTCTS(0.005)S(0.005)S(0.008)LS(0.951)PT(0.031)K;TQTCTSSS(0.007)LS(0.992)PTK 190.86 0.00016697 12507000 5681 6544.1 6218 6000.3 5036.3 4294.3 5232.7 5230.3 5689.4 5208.6 TRUE FALSE 5197.801118 6118.077901 5795.939484 6462.444146 4835.693506 4537.439555 4883.636131 5184.572039 6280.83349 5853.880691 0.887923993 1.045131977 0.990102086 1.103958978 0.82606629 0.775116507 0.834256178 0.885664111 1.072935002 1 12.51517763 TQTCTSSSLS(ph)PTK ddPTM_A459_MK2206_30min_R2 3 TQTCTSSSLSPTK 13 0 A0A2R8YCF6;A0A2R8YD00;R4GN03;A0A2R8Y500;A0A2U3TZI0;Q9BZR9 A0A2R8YCF6 TRIM8 Probable E3 ubiquitin-protein ligase TRIM8 1 TQTCTS(0.003)S(0.002)S(0.025)LS(0.957)PT(0.013)K;TQTCT(0.001)S(0.002)S(0.001)S(0.002)LS(0.869)PT(0.125)K;TQTCTSSSLS(0.507)PT(0.493)K 158.29 0.00036465 26851600 49435 53926 53569 51413 56996 47396 61660 45471 48364 54300 TRUE FALSE 53219.78161 51248.11326 55354.96372 47212.39344 54758.05066 49199.68799 53563.96793 51414.21583 52570.6133 52528.19545 1.013165999 0.97563057 1.053814304 0.898800978 1.042450634 0.936633889 1.01971841 0.97879273 1.000807525 1 15.6808044 -8.325775337 23.38267044 1.000403878 0.989469018 0.008836788 0.044431966 936.0821737 340197.6152 0.038873026 0.010036989 4.72E-09 8.325775337 -0.01093486 TQTES(ph)STPPGIPGGSR ddPTM_A459_MK2206_30min_R1 1 TQTESSTPPGIPGGSR 16 0 E9PER6;Q6A1A2;H3BQ10;O15530-4;O15530-5;O15530;O15530-3 E9PER6 PDPK1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 1 TQTES(0.926)S(0.037)T(0.037)PPGIPGGSR 149.6 0.00025436 6572500 3134.2 3105.6 3180 2651.5 3282.3 2638.4 3250 2893.4 2750.7 2611.9 TRUE FALSE 2867.619832 2903.424876 2964.15046 2855.718989 3151.559041 2787.783928 3033.19843 2868.103309 3036.645108 2935.481891 0.97688214 0.989079471 1.009766222 0.972828004 1.073608749 0.949685275 1.033288074 0.977046841 1.034462218 1 11.51938164 -4.790954068 1.13775644 1.006676913 0.961850424 0.077342136 0.033594686 4.498189482 4.885980241 0.009762938 0.242054979 1.62E-05 4.790954068 -0.044826489 TQTESS(ph)TPPGIPGGSR ddPTM_A459_MK2206_30min_R1 1 TQTESSTPPGIPGGSR 16 0 E9PER6;Q6A1A2;H3BQ10;O15530-4;O15530-5;O15530;O15530-3 E9PER6 PDPK1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 1 TQTES(0.004)S(0.498)T(0.498)PPGIPGGSR 251.28 1.73E-29 5432500 1967.8 1891 1543.5 1529.8 1930.2 1560.4 1731.1 1908 1436.8 1468.6 TRUE FALSE 1800.428277 1767.895556 1438.73152 1647.625461 1853.316047 1648.7485 1615.621478 1891.318557 1586.160502 1650.541255 1.09081083 1.071100495 0.871672559 0.998233431 1.122853513 0.998913838 0.978843438 1.145877785 0.960994157 1 10.68872348 TQTESS(ph)TPPGIPGGSR ddPTM_A459_MK2206_30min_R2 2 TQTESSTPPGIPGGSR 16 0 E9PER6;Q6A1A2;H3BQ10;O15530-4;O15530-5;O15530;O15530-3 E9PER6 PDPK1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 1 TQT(0.012)ES(0.028)S(0.48)T(0.48)PPGIPGGSR;TQT(0.006)ES(0.125)S(0.434)T(0.434)PPGIPGGSR 170.48 9.59E-06 15518200 58298 63022 59048 73757 65020 60798 66083 42500 58174 64488 TRUE FALSE 62761.3397 59892.41912 61016.63085 67730.81716 62466.9881 63111.71049 57406.22272 48054.89592 63233.86937 62383.76184 1.006052502 0.960064244 0.978085147 1.085712294 1.001334101 1.01166888 0.920210982 0.770310967 1.013627064 1 15.92888293 -7.295869201 5.672253821 0.905886763 1.007113877 0.228111755 0.069461516 0.237786163 22.39378048 0.02848982 0.019446873 5.06E-08 7.295869201 0.101227114 TQTGDSS(ph)SISSFSYR ddPTM_A459_MK2206_30min_R1 1 TQTGDSSSISSFSYR 15 0 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328;Q4V328-3;Q4V328-2 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 TQT(0.001)GDS(0.072)S(0.442)S(0.442)IS(0.015)S(0.029)FS(0.001)YR 117.53 0.0021303 6709200 2233.2 1894.8 1417.9 1368.3 2923.7 2933 2709.3 1818.1 1083.6 1571.3 TRUE FALSE 2043.254613 1771.448176 1321.656898 1473.686703 2807.242838 3099.063925 2528.56754 1802.204543 1196.244098 1765.964507 1.157019071 1.003105198 0.748405131 0.834493954 1.58963718 1.754884605 1.431833726 1.020521385 0.677388528 1 10.78624063 -6.236775159 24.85524504 1.281501841 0.92718429 0.189331442 0.308721053 1233.167671 1242718.528 0.101355679 0.130788925 5.80E-07 6.236775159 -0.354317551 TQTGDSS(ph)SISSFSYR ddPTM_A459_MK2206_30min_R2 1 TQTGDSSSISSFSYR 15 0 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328;Q4V328-3;Q4V328-2 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 TQTGDS(0.039)S(0.461)S(0.461)IS(0.039)SFSYR 270.79 5.82E-45 8233000 20493 34525 30872 35250 25380 30982 24474 22586 22721 24644 TRUE FALSE 22061.95984 32810.5387 31901.25707 32369.96224 24383.45368 32161.04172 21260.5344 25538.06775 24697.23151 23839.8683 0.925422891 1.376288589 1.33814737 1.357807931 1.022801526 1.349044438 0.891805866 1.071233592 1.035963421 1 14.54108865 -7.261234215 24.99999997 1.005686852 1.23652653 0.364082813 0.147617016 21.04046115 2564077.878 0.058170387 0.042148443 5.48E-08 7.261234215 0.230839678 TQTGDSSSIS(ph)SFSYR ddPTM_A459_MK2206_30min_R2 1 TQTGDSSSISSFSYR 15 0 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328;Q4V328-3;Q4V328-2 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 TQTGDS(0.006)S(0.092)S(0.092)IS(0.798)S(0.012)FSYR 234.77 1.67E-14 7430300 23756 31553 22927 29880 24621 28709 23544 21069 20290 20433 TRUE FALSE 25574.77763 29986.1239 23691.37474 27438.70842 23654.25583 29801.54111 20452.64452 23822.79064 22054.78752 19766.27288 1.293859382 1.517034804 1.198575719 1.388157928 1.196697828 1.507696534 1.034724383 1.205224211 1.115778764 1 14.27075324 -7.779716158 0.60633276 1.006403935 1.364089117 0.457098469 0.126100892 0.668087874 0.515246641 0.115207513 0.064042564 1.66E-08 7.779716158 0.357685183 TQTPPVS(ph)PAPQPTEER ddPTM_A459_MK2206_30min_R2 2 TQTPPVSPAPQPTEER 16 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 TQTPPVS(1)PAPQPTEER;TQT(0.035)PPVS(0.762)PAPQPT(0.202)EER 200.33 7.23E-07 18733300 53349 56503 49992 49728 43662 45252 52756 37598 45790 49211 TRUE FALSE 57433.44046 53697.14318 51658.70833 45665.06333 41947.6105 46974.09657 45829.07383 42512.18769 49772.73143 47605.2491 1.206451842 1.127966857 1.085147317 0.959244289 0.881155152 0.986741955 0.962689508 0.893014709 1.045530322 1 15.53883304 -5.50246561 1.937080525 0.953533027 1.178904678 0.750724994 0.048645607 0.16292298 1.184919215 0.01398944 0.038263374 3.14E-06 5.50246561 0.225371651 TQTPPVS(ph)PAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A459_MK2206_30min_R2 2 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 T(0.002)QT(0.008)PPVS(0.774)PAPQPT(0.218)EERLPS(0.413)S(0.412)PVY(0.164)EDAAS(0.009)FK;T(0.004)QT(0.016)PPVS(0.541)PAPQPT(0.431)EERLPS(0.428)S(0.427)PVY(0.152)EDAAS(0.001)FK 62.57 0.0026957 56080000 145393 216070 223310 204877 235810 171045 214518 167446 191670 209790 TRUE FALSE 156524.3999 205340.278 230755.0439 188137.8937 226550.9145 177554.2373 186351.5289 189331.7671 208341.1101 202944.5695 0.771266757 1.011804743 1.137034829 0.927040789 1.116319176 0.87489031 0.918238558 0.932923545 1.026591205 1 17.63072621 TQTPPVS(ph)PAPQPTEERLPSSPVYEDAASFK ddPTM_A459_MK2206_30min_R2 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 T(0.021)QT(0.171)PPVS(0.723)PAPQPT(0.065)EERLPS(0.012)S(0.005)PVY(0.002)EDAASFK 50.088 0.011296 8754000 5610.9 12057 9724.8 10667 13840 10566 13100 8401.4 12351 10868 TRUE FALSE 6040.474818 11458.26691 10049.01998 9795.471978 13296.57206 10968.09653 11379.95426 9499.491826 13425.26765 10513.37805 0.57455128 1.089874906 0.955831697 0.931714995 1.264728805 1.043251416 1.082426049 0.903562279 1.276969932 1 13.35993868 -4.759072368 24.97795953 1.057081131 0.574550644 0.592773706 0.12090167 43.17338627 455487.2752 0.028991607 0.189124388 1.74E-05 4.759072368 -0.482530487 TQTPPVSPAPQPT(ph)EER ddPTM_A459_MK2206_30min_R1 1 TQTPPVSPAPQPTEER 16 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 T(0.001)QT(0.011)PPVS(0.327)PAPQPT(0.661)EER 85.176 0.038612 8196600 2007.2 715.34 720.84 628.06 4670 3595.6 2472.9 1886.4 745.26 685.42 TRUE FALSE 1836.4771 668.771236 671.9113892 676.43329 4483.984011 3799.179765 2307.937353 1869.907404 822.7324439 770.3350043 2.383997987 0.868156364 0.872232711 0.878102756 5.82082339 4.93185399 2.996017759 2.427395086 1.06801903 1 9.589342173 TQTPPVSPAPQPT(ph)EERLPSSPVYEDAASFK ddPTM_A459_MK2206_30min_R1 2 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 TQTPPVS(0.018)PAPQPT(0.951)EERLPS(0.014)S(0.014)PVY(0.002)EDAASFK;T(0.002)QT(0.006)PPVS(0.036)PAPQPT(0.955)EERLPS(0.001)S(0.001)PVYEDAASFK 83.318 9.96E-06 96376000 3825.8 4328.5 4014.6 4338.4 4259.4 2953.3 3441.8 4564.2 2963.2 2526.6 TRUE FALSE 3500.39562 4046.713863 3742.100137 4672.54432 4089.739079 3120.513294 3212.203802 4524.295681 3271.235244 2839.614283 1.232701089 1.425092798 1.317819874 1.645485568 1.440244579 1.098921538 1.131211313 1.593278252 1.151999856 1 11.47147926 -6.738941702 24.98690512 1.228170137 1.420690621 0.262996718 0.17723732 378.5974827 420485.9563 0.059429782 0.05938849 1.82E-07 6.738941702 0.192520483 TQTPPVSPAPQPT(ph)EERLPSSPVYEDAASFK ddPTM_A459_MK2206_30min_R2 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 T(0.003)QT(0.007)PPVS(0.38)PAPQPT(0.567)EERLPS(0.027)S(0.011)PVY(0.004)EDAASFK 66.437 0.00063535 95863000 23211 36046 41454 42822 46523 38048 41774 30183 48305 37294 TRUE FALSE 24988.05201 34256.00806 42836.05567 39323.30562 44696.27326 39495.9433 36289.02362 34128.02173 52506.48158 36077.09983 0.692629178 0.949522224 1.187347538 1.089979677 1.23890982 1.09476492 1.005874191 0.945974646 1.45539641 1 15.13879575 -4.885672303 2.650107175 1.122108166 0.654173776 0.485693963 0.138505869 0.314752474 3.476741394 0.035101153 0.2986329 1.30E-05 4.885672303 -0.46793439 TQTPPVSPAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A459_MK2206_30min_R1 3 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 TQTPPVS(0.001)PAPQPT(0.022)EERLPS(0.463)S(0.463)PVY(0.051)EDAASFK;TQTPPVS(0.002)PAPQPT(0.041)EERLPS(0.451)S(0.451)PVY(0.056)EDAASFK;TQTPPVS(0.002)PAPQPT(0.185)EERLPS(0.387)S(0.387)PVY(0.04)EDAASFK 80.722 1.08E-05 773280000 13044 12061 12792.4 12326.9 12318.4 10885.8 11082.6 12415.4 8751.7 7206.7 TRUE FALSE 11934.5393 11275.82671 11924.08753 13276.31997 11827.73204 11502.14459 10343.29998 12306.85347 9661.470533 8099.520404 1.473487158 1.3921598 1.472196739 1.639148902 1.460300296 1.420101934 1.277026226 1.519454592 1.192844768 1 12.98362077 -8.71444515 0.656162175 0.990211715 1.481637794 0.712872537 0.093098325 0.574043539 0.528101407 0.099699332 0.038575886 1.93E-09 8.71444515 0.491426079 TQTPPVSPAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A459_MK2206_30min_R2 8 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 TQTPPVSPAPQPT(0.029)EERLPS(0.454)S(0.454)PVY(0.062)EDAASFK;TQTPPVS(0.002)PAPQPT(0.045)EERLPS(0.386)S(0.386)PVY(0.178)EDAAS(0.002)FK;TQTPPVSPAPQPT(0.011)EERLPS(0.459)S(0.459)PVY(0.07)EDAASFK;TQTPPVSPAPQPT(0.125)EERLPS(0.415)S(0.415)PVY(0.044)EDAASFK;TQTPPVS(0.001)PAPQPT(0.016)EERLPS(0.392)S(0.392)PVY(0.199)EDAAS(0.001)FK;TQTPPVSPAPQPT(0.046)EERLPS(0.403)S(0.403)PVY(0.147)EDAAS(0.001)FK;TQTPPVS(0.001)PAPQPT(0.027)EERLPS(0.386)S(0.386)PVY(0.198)EDAAS(0.002)FK;TQT(0.001)PPVS(0.033)PAPQPT(0.123)EERLPS(0.326)S(0.326)PVY(0.176)EDAAS(0.015)FK 69.79 0.00015466 856965400 288844.7 458470 411792 468266 532525 411814 471871 350775 433655 416335 TRUE FALSE 310958.8723 435703.0465 425520.9398 430007.1699 511615.3928 427485.8703 409913.7709 396622.4969 471373.528 402750.023 0.772089024 1.081820041 1.056538586 1.06767758 1.270305061 1.06141737 1.017787082 0.984785783 1.17038734 1 18.61952515 -4.761339066 24.14667291 1.080958404 0.772088544 0.566622648 0.080497855 1.172212404 279967.9907 0.020507924 0.114856327 1.73E-05 4.761339066 -0.30886986 TQVAGGQLS(ph)FK ddPTM_A459_MK2206_30min_R2 1 TQVAGGQLSFK 11 0 P46060;B0QYT5;B0QYT4;B0QYT6 P46060 RANGAP1 Ran GTPase-activating protein 1 1 TQVAGGQLS(1)FK 116.9 0.0047698 0 16419 20798 16632 16034 16843 14167 31208 26866 23691 16982 TRUE FALSE 17676.05126 19765.20156 17186.50258 14723.97091 16181.65919 14706.13511 27110.35211 30377.47844 25751.60036 16427.87873 1.075978923 1.203149955 1.046179051 0.896279498 0.985012092 0.895193795 1.650264928 1.849141873 1.567554812 1 14.00385858 -7.26524291 24.98446785 1.587502254 1.0198182 0.543104091 0.220774834 223.4670067 1467890.975 0.08774962 0.061708925 5.43E-08 7.26524291 -0.567684054 TQVLS(ph)PDSLFTAK ddPTM_A459_MK2206_30min_R2 1 TQVLSPDSLFTAK 13 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-1;H0Y8L4;H0Y948 A8MQ02 MLLT4 Afadin 1 T(0.305)QVLS(0.628)PDS(0.067)LFTAK 141.86 0.00080613 3903200 21670 25956 22485 25403 21564 19081 20964 17801 17123 18682 TRUE FALSE 23329.07186 24667.06278 23234.63868 23327.49364 20717.28901 19807.14083 18211.40162 20127.65182 18612.32759 18072.40787 1.29086683 1.364901842 1.285641562 1.290779503 1.146349128 1.095987926 1.007690937 1.113722752 1.029875362 1 14.14150112 -6.416963584 1.466397288 1.046223136 1.324408151 0.918914422 0.036476395 0.099825955 0.434523681 0.013741617 0.016620216 3.83E-07 6.416963584 0.278185015 TQVLSPDS(ph)LFTAK ddPTM_A459_MK2206_30min_R2 1 TQVLSPDSLFTAK 13 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-1;H0Y8L4;H0Y948 A8MQ02 MLLT4 Afadin 1 TQVLS(0.388)PDS(0.611)LFTAK 137.21 0.0010532 3922900 55799 64898 52597 51551 52079 40187 57907 38993 38756 52135 TRUE FALSE 60071.01434 61675.25969 54350.55773 47339.1184 50034.11678 41716.34445 50303.74134 44089.51898 42126.92683 50433.83922 1.191085495 1.222894403 1.077660527 0.938638008 0.992074321 0.827149888 0.997420425 0.874205091 0.835290897 1 15.62210443 -5.578186636 1.756910318 0.913706637 1.218213257 0.78074917 0.060817837 0.158802395 0.963298323 0.017908149 0.047123896 2.64E-06 5.578186636 0.30450662 TQYNQVPS(ph)EDFER ddPTM_A459_MK2206_30min_R1 2 TQYNQVPSEDFER 13 0 P78310-7;P78310-2;P78310-6;P78310 P78310-7 CXADR Coxsackievirus and adenovirus receptor 1 TQYNQVPS(1)EDFER;TQYNQVPS(1)EDFER 145.86 0.0008173 0 886.11 850.82 834.44 650.66 823.33 909.66 1115.09 1021.99 1127.67 1153.3 TRUE FALSE 810.7416914 795.4314634 777.8005377 700.7739459 790.5350227 961.1641631 1040.704381 1013.054849 1244.895332 1296.179511 0.625485656 0.613673844 0.600071619 0.540645752 0.60989625 0.741536303 0.802901428 0.781569868 0.960434354 1 10.34004982 -7.6481714 0.725913891 0.99743198 0.58649515 0.920893034 0.042251421 0.185632642 0.187011337 0.041472208 0.021042543 2.25E-08 7.6481714 -0.410936831 TRDDGDEEGLLTHS(ph)EEELEHSQDTDADDGALQ ddPTM_A459_MK2206_30min_R1 2 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 TRDDGDEEGLLTHS(0.663)EEELEHS(0.168)QDT(0.168)DADDGALQ;TRDDGDEEGLLT(0.008)HS(0.447)EEELEHS(0.447)QDT(0.097)DADDGALQ 96.351 4.65E-09 91715000 5000 4749.6 4822.9 3839.9 5884.1 4468.4 5230.5 4509 4227.4 4264.5 TRUE FALSE 4574.723744 4440.400177 4495.534985 4135.649763 5649.723837 4721.396946 4881.582889 4469.578288 4666.853358 4792.818455 0.95449552 0.926469512 0.937973142 0.86288471 1.178789451 0.985098224 1.0185203 0.932557394 0.973717949 1 12.22665858 TRDDGDEEGLLTHS(ph)EEELEHSQDTDADDGALQ ddPTM_A459_MK2206_30min_R2 3 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 TRDDGDEEGLLT(0.007)HS(0.707)EEELEHS(0.248)QDT(0.038)DADDGALQ;TRDDGDEEGLLT(0.053)HS(0.686)EEELEHS(0.208)QDT(0.053)DADDGALQ;TRDDGDEEGLLT(0.038)HS(0.678)EEELEHS(0.142)QDT(0.142)DADDGALQ 94.275 9.38E-09 350078000 47853.9 63593.8 54241.2 62413 54077.1 55436.1 54589.1 38586.8 50947.9 56029.1 TRUE FALSE 51517.63138 60435.82437 56049.57454 57313.65825 51953.76134 57545.75963 47421.4856 43630.22725 55379.25625 54200.87506 0.950494458 1.115034108 1.034108296 1.057430497 0.958541007 1.061712741 0.874921033 0.804972746 1.021740999 1 15.72602852 -7.260245222 24.98855172 0.909156422 1.03168533 0.318361118 0.073084571 111.0510444 2323857.554 0.028119453 0.020520587 5.49E-08 7.260245222 0.122528909 TRDDGDEEGLLTHSEEELEHS(ph)QDTDADDGALQ ddPTM_A459_MK2206_30min_R2 3 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 TRDDGDEEGLLT(0.017)HS(0.127)EEELEHS(0.428)QDT(0.428)DADDGALQ;TRDDGDEEGLLT(0.005)HS(0.257)EEELEHS(0.421)QDT(0.317)DADDGALQ;TRDDGDEEGLLT(0.001)HS(0.041)EEELEHS(0.479)QDT(0.479)DADDGALQ 71.295 5.37E-05 346880000 46098.2 52739.8 49412.4 56803.8 63737.3 48440.2 51102.4 51093.7 54828.8 56590.3 TRUE FALSE 49627.51364 50120.81822 51059.78475 52162.74783 61234.65335 50283.62575 44392.5935 57771.82202 59597.70992 54743.76315 0.906541874 0.91555303 0.932705058 0.952852797 1.118568579 0.918527022 0.810916001 1.055313312 1.088666662 1 15.74040699 -1.522878745 0.227851489 1.01616369 0.36035143 0.145457314 0.083180011 117.4068395 1.52937778 0.13406733 28.62860824 0.03 1.522878745 -0.65581226 TRDELDQFLDK ddPTM_A459_MK2206_30min_R2 1 TRDELDQFLDK 11 1 Q14137;Q14137-2;A0A075B729 Q14137 BOP1 Ribosome biogenesis protein BOP1 0 142.89 0.002491 1158500 53372 50072 41740 40827 42475 33801 42143 36374 18514 17501 FALSE TRUE 57458.20136 47585.49729 43131.59077 37491.3035 40807.21808 35087.32074 36609.57348 41128.20669 20124.31425 16929.9438 3.393880217 2.810729784 2.547651148 2.21449663 2.410357563 2.072500721 2.162415534 2.429317378 1.188681693 1 14.04728956 -1.522878746 0.08646018 0.00806563 8.626531211 0.808425889 0.293331595 74.23453178 0.465612708 6.388576793 76.00367425 0.03 1.522878746 8.618465581 up TREEECHFYAGGQVYPGEASR ddPTM_A459_MK2206_30min_R2 2 TREEECHFYAGGQVYPGEASR 21 1 Q13162;A6NG45 Q13162 PRDX4 Peroxiredoxin-4 0 ; 100.39 0.00021752 13384700 45186 61679 53734 72503 64003 64507 71199 45271 56781 51197 FALSE TRUE 48645.4749 58616.11055 55525.46474 66579.27297 61489.92063 66961.85909 61850.48577 51188.07514 61719.70874 49526.44608 0.982212106 1.183531531 1.121127582 1.344317597 1.241557299 1.352042482 1.248837554 1.033550339 1.246197004 1 15.59591148 -9.32834068 0.839587439 0.998071989 1.20536627 0.195458295 0.115474097 6.200611641 5.133290834 0.162553188 0.039595736 4.70E-10 9.32834068 0.207294281 TREEIQEVR ddPTM_A459_MK2206_30min_R1 1 TREEIQEVR 9 1 P08559-3;P08559;P08559-2;P08559-4;Q5JPU3;P29803 P08559-3 PDHA1;PDHA2 "Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial" 0 104.42 0.014566 0 1909.5 1630.5 1233.2 1525.7 1718.6 1685.3 1580.3 1690.3 1344.6 1379.2 FALSE TRUE 1747.086998 1524.354154 1149.49382 1643.209678 1650.144523 1780.72023 1474.88107 1675.521885 1484.375982 1550.065708 1.127105121 0.983412603 0.741577479 1.060090336 1.06456424 1.14880306 0.951495838 1.080936038 0.957621328 1 10.59811366 -4.756666923 24.55088917 1.000405301 1.127105362 0.120887561 0.103773375 286.1945885 1472045.536 0.027153261 0.214448388 1.75E-05 4.756666923 0.126700061 TRHS(ph)PTPQQSNR ddPTM_A459_MK2206_30min_R2 4 TRHSPTPQQSNR 12 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.089)RHS(0.867)PT(0.041)PQQS(0.004)NR;T(0.009)RHS(0.94)PT(0.013)PQQS(0.038)NR;T(0.088)RHS(0.907)PT(0.003)PQQS(0.002)NR;T(0.051)RHS(0.888)PT(0.022)PQQS(0.039)NR 87.641 0.037581 1728278190 59730.6 37916.5 39076.85 46725.7 43764.89 50189.7 47090.6 105265.3 69012.9 67793.5 TRUE FALSE 64303.62066 36033.62175 40379.65268 42908.06084 42046.46052 52099.7042 40907.54765 119023.8361 75015.5173 65581.40365 0.980516078 0.549448773 0.61571803 0.654271767 0.641133891 0.794428013 0.623767492 1.814902236 1.143853488 1 16.00099916 -7.738225297 24.99999561 1.3595335 0.685878774 0.614424796 0.226303355 124.8861989 134494.2099 0.099078698 0.05715806 1.83E-08 7.738225297 -0.673654726 TRHSPTPQQSNR ddPTM_A459_MK2206_30min_R2 1 TRHSPTPQQSNR 12 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 0 103.14 0.016002 0 503.87 0 0 0 706.18 0 397.79 792.3 0 0 FALSE TRUE 542.4466746 0 0 0 678.4518249 0 345.5596952 895.8563304 0 0 0 TRKS(ph)PSSDSWTCADTSTER ddPTM_A459_MK2206_30min_R1 2 TRKSPSSDSWTCADTSTER 19 2 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;H0YIQ0 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 T(0.203)RKS(0.562)PS(0.128)S(0.083)DS(0.016)WT(0.007)CADTSTER;T(0.206)RKS(0.766)PS(0.027)S(0.001)DSWTCADTSTER 74.793 0.010933 16008400 3316.3 2842.3 2793.9 2454.7 2568.8 1870.7 2215.1 2666 1670.05 986.52 TRUE FALSE 3034.23127 2657.265753 2604.257852 2643.761419 2466.479256 1976.617417 2067.334721 2642.691443 1843.657674 1108.737545 2.736654209 2.396658943 2.348849701 2.384479023 2.224583506 1.782764032 1.864584391 2.383513983 1.662844089 1 10.11470218 -9.249936262 0.125850726 5.83E-16 3.208385748 0.809648379 0.208538485 8.176466203 0.404814222 6.506849457 3.206159178 5.62E-10 9.249936262 3.208385748 TRLS(ph)TASEETVQNR ddPTM_A459_MK2206_30min_R1 4 TRLSTASEETVQNR 14 1 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 T(0.007)RLS(0.493)T(0.493)AS(0.006)EET(0.002)VQNR;T(0.056)RLS(0.469)T(0.469)AS(0.005)EETVQNR;T(0.013)RLS(0.958)T(0.027)AS(0.002)EETVQNR;T(0.024)RLS(0.974)T(0.002)ASEETVQNR 225.31 4.79E-09 92821000 10857.05 10229.36 8822.75 8054.22 8541.64 6583.5 6847.06 6274.92 5038.85 4307.59 TRUE FALSE 9933.600885 9563.426805 8223.886312 8674.55742 8201.408392 6956.252081 6390.305121 6220.059036 5562.656489 4841.24677 2.051868322 1.97540577 1.698712481 1.791802367 1.694069479 1.436872031 1.319970955 1.284805202 1.14901321 1 12.24116292 -6.579233943 0.362689471 0.968682947 2.205370925 0.965133752 0.062839611 0.336626005 0.085231874 0.074340747 0.161026415 2.63E-07 6.579233943 1.236687979 up TRLS(ph)TASEETVQNR ddPTM_A459_MK2206_30min_R2 2 TRLSTASEETVQNR 14 1 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 T(0.004)RLS(0.96)T(0.031)AS(0.003)EET(0.002)VQNR;T(0.121)RLS(0.733)T(0.145)ASEETVQNR 184.87 0.00037347 54989000 116321 136223 130822 143866 125469 129983 108702 99962 92433 96355 TRUE FALSE 125226.6252 129458.3639 135183.5402 132111.6876 120542.4566 134929.5941 94429.29683 113027.3766 100472.6553 93210.94424 1.343475557 1.388875147 1.450296865 1.417340943 1.293222138 1.447572442 1.013070918 1.2125977 1.077906206 1 16.50821174 -7.258780915 24.99991183 1.093610175 1.389640204 0.828241914 0.06991782 96.11111235 903823.9001 0.026882685 0.019843822 5.51E-08 7.258780915 0.296030029 TRNS(ph)GIWESPELDR ddPTM_A459_MK2206_30min_R1 6 TRNSGIWESPELDR 14 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 T(0.078)RNS(0.922)GIWESPELDR;T(0.016)RNS(0.984)GIWESPELDR;T(0.006)RNS(0.993)GIWESPELDR;T(0.001)RNS(0.993)GIWES(0.007)PELDR;T(0.03)RNS(0.97)GIWESPELDR;TRNS(1)GIWESPELDR 292.38 4.22E-66 125772000 10128 10142.7 10869.6 9038.7 10715.6 9782 10939.8 9051.2 8543.9 9055.5 TRUE FALSE 9266.560416 9482.408386 10131.80184 9734.86224 10288.77496 10335.84839 10210.0259 8972.066313 9432.06898 10177.36371 0.910506953 0.931715586 0.995523215 0.956521013 1.010946966 1.015572273 1.003209298 0.881570765 0.926769373 1 13.31307628 -5.077342866 4.775991393 0.972670921 0.914653193 0.221506958 0.04026461 0.333862066 13.57823935 0.011396064 0.034290204 8.37E-06 5.077342866 -0.058017728 TRNS(ph)GIWESPELDR ddPTM_A459_MK2206_30min_R2 3 TRNSGIWESPELDR 14 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 T(0.017)RNS(0.981)GIWES(0.002)PELDR;T(0.006)RNS(0.994)GIWESPELDR;TRNS(0.85)GIWES(0.15)PELDR 129.42 0.00057992 66686800 33906.7 35129.9 40319.8 45828 45604.1 40293 47921.7 31194 37217 37279.2 TRUE FALSE 36502.62302 33385.40025 41664.04201 42083.7058 43813.45389 41826.37835 41629.52323 35271.16291 40454.06739 36062.78276 1.012196515 0.92575774 1.155319663 1.166956696 1.214921605 1.159821155 1.154362477 0.978048842 1.12176777 1 15.13822311 -5.264522706 24.98467083 1.125989481 0.968977122 0.397454371 0.073423802 240.2446579 1946752.509 0.019902539 0.044467865 5.44E-06 5.264522706 -0.157012359 TRPDGNCFYR ddPTM_A459_MK2206_30min_R1 2 TRPDGNCFYR 10 1 J3KR44;F5H6Q1;F5GYJ8;Q96FW1;F5GYN4 J3KR44 OTUB1 Ubiquitin thioesterase OTUB1 0 ; 120.27 0.014484 14345300 1378.85 2729.8 2220.48 2272.1 1423.01 1394.93 1587.23 1618.68 1803.16 1854.95 FALSE TRUE 1261.571567 2552.089524 2069.760004 2447.097536 1366.328498 1473.909731 1481.348783 1604.528051 1990.604935 2084.75521 0.605141343 1.224167476 0.99280721 1.173805694 0.655390375 0.706994147 0.710562456 0.769648179 0.95483869 1 11.02566228 -6.2667429 24.93005901 0.778975318 1.014624275 0.211619367 0.18504082 564.5101748 2653566.522 0.054945958 0.064122619 5.41E-07 6.2667429 0.235648957 TRPGS(ph)FQSLSDALSDTPAK ddPTM_A459_MK2206_30min_R1 2 TRPGSFQSLSDALSDTPAK 19 1 G3V4K3;Q9H9C1-2;Q9H9C1 G3V4K3 VIPAS39 Spermatogenesis-defective protein 39 homolog 1 T(0.204)RPGS(0.592)FQS(0.204)LS(0.001)DALSDTPAK;T(0.222)RPGS(0.662)FQS(0.112)LS(0.003)DALSDTPAK 125.08 0.00021795 82582000 8951.6 7658 7532 6905.4 7498.6 5726.9 7730.4 7304.4 6317.3 6021 TRUE FALSE 8190.219413 7159.462808 7020.748825 7437.255104 7199.914883 6051.152129 7214.719121 7240.538401 6974.005942 6766.926936 1.2103307 1.058007996 1.037509181 1.099059466 1.063985905 0.89422454 1.06617364 1.06998915 1.030601632 1 12.7242851 TRPGS(ph)FQSLSDALSDTPAK ddPTM_A459_MK2206_30min_R2 7 TRPGSFQSLSDALSDTPAK 19 1 G3V4K3;Q9H9C1-2;Q9H9C1 G3V4K3 VIPAS39 Spermatogenesis-defective protein 39 homolog 1 T(0.024)RPGS(0.936)FQS(0.04)LS(0.001)DALSDTPAK;T(0.005)RPGS(0.605)FQS(0.388)LS(0.002)DALSDTPAK;T(0.007)RPGS(0.991)FQS(0.002)LSDALSDTPAK;T(0.135)RPGS(0.775)FQS(0.05)LS(0.032)DALS(0.006)DT(0.001)PAK;T(0.009)RPGS(0.991)FQSLSDALSDTPAK;T(0.066)RPGS(0.934)FQSLSDALSDTPAK;T(0.11)RPGS(0.765)FQS(0.089)LS(0.031)DALS(0.004)DT(0.002)PAK 153.76 0.00011549 101535400 410158 407722 444781 436382 366642 332167 412272 265045.3 298869 411078 TRUE FALSE 441560.0118 387475.1184 459609.7765 400728.1947 352245.7929 344807.8479 358140.1912 299687.6307 324864.0854 397664.5585 1.110383117 0.974376796 1.155772539 1.007704071 0.885786237 0.867082169 0.900608776 0.75361916 0.816929944 1 18.60119246 -6.209721067 2.800622049 0.856147847 1.071328334 0.627545803 0.073266222 0.171403387 2.662531659 0.022920747 0.029843924 6.17E-07 6.209721067 0.215180487 TRPWLQELSMGS(ph)PGPVTNK ddPTM_A459_MK2206_30min_R1 2 TRPWLQELSMGSPGPVTNK 19 1 A0A1B0GV70;Q96N21-2;Q96N21 A0A1B0GV70 ENTHD2 AP-4 complex accessory subunit tepsin 1 TRPWLQELS(0.001)MGS(0.853)PGPVT(0.146)NK;TRPWLQELSMGS(0.999)PGPVT(0.001)NK 181.65 2.03E-13 84919000 14731.8 14573.3 13973.2 12697.1 14137.3 11961.6 13117.5 13360.9 12580.7 12279.9 TRUE FALSE 13478.78305 13624.57552 13024.73812 13675.03284 13574.1814 12638.85545 12242.45551 13244.08706 13888.50879 13801.22672 0.976636593 0.987200326 0.943737711 0.990856329 0.983548903 0.915777685 0.887055604 0.959631149 1.006324225 1 13.75250889 -6.721215957 24.99946561 0.947065695 0.975985236 0.077952618 0.035349857 337.7468494 209913.748 0.012240064 0.012239899 1.90E-07 6.721215957 0.028919541 TRPWLQELSMGS(ph)PGPVTNK ddPTM_A459_MK2206_30min_R2 2 TRPWLQELSMGSPGPVTNK 19 1 A0A1B0GV70;Q96N21-2;Q96N21 A0A1B0GV70 ENTHD2 AP-4 complex accessory subunit tepsin 1 TRPWLQELSMGS(1)PGPVTNK;TRPWLQELSMGS(1)PGPVTNK 149.74 1.65E-05 27606000 112966 118482 104498 124735 129384 109579 134532 107061 109077 122935 TRUE FALSE 121614.7638 112598.3562 107981.9112 114543.7515 124303.7341 113749.1056 116867.7868 121054.2403 118564.3203 118923.641 1.022628998 0.946812217 0.907993652 0.963170573 1.045239895 0.956488589 0.982712821 1.017915692 0.996978559 1 16.85967601 -6.024262161 24.43661817 0.99834247 0.954190085 0.244832011 0.033846046 766.9166256 772430.8218 0.010125051 0.013148024 9.46E-07 6.024262161 -0.044152385 TRS(ph)EITFGQVK ddPTM_A459_MK2206_30min_R2 1 TRSEITFGQVK 11 1 F5H5A3;Q8IVH8-3;Q8IVH8-2;Q8IVH8;H7C1A4 F5H5A3 MAP4K3 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 3 1 T(0.399)RS(0.6)EITFGQVK 120.29 0.0026255 6709300 40213 65873 53336 62048 63993 63712 54694 40345 53279 42899 TRUE FALSE 43291.7382 62601.84261 55114.19562 56978.47992 61480.31328 66136.60481 47512.6121 45618.23003 57913.11111 41499.20914 1.043194294 1.508506882 1.328078215 1.373001585 1.481481564 1.593683498 1.144904037 1.099255407 1.395523248 1 15.34079622 -7.297847758 24.86004316 1.168191882 1.394313963 0.312295564 0.165461624 700.9558853 478617.7178 0.067643551 0.045606799 5.04E-08 7.297847758 0.226122081 TRS(ph)ESPAVR ddPTM_A459_MK2206_30min_R2 1 TRSESPAVR 9 1 Q9UBC3-6;Q9UBC3-4;Q9UBC3-3;Q9UBC3-5;Q9UBC3-2;Q9UBC3 Q9UBC3-6 DNMT3B DNA (cytosine-5)-methyltransferase 3B 1 T(0.234)RS(0.742)ES(0.024)PAVR 65.842 0.047858 4552100 7817.6 11672 9655.4 10603 13551 13176 16076 13555 11720 10688 TRUE FALSE 8416.121467 11092.38545 9977.306217 9736.700983 13018.91965 13677.42191 13965.20189 15326.68504 12739.38442 10339.25144 0.813997176 1.072842219 0.964993093 0.941722043 1.259174296 1.322863845 1.35069758 1.482378597 1.232137984 1 13.33584412 -6.313151679 4.2556265 1.309771698 0.956948786 0.596490895 0.129857917 0.140656417 5.443862982 0.039362606 0.046046956 4.86E-07 6.313151679 -0.352822912 TRS(ph)LDFR ddPTM_A459_MK2206_30min_R2 1 TRSLDFR 7 1 Q9H1K0 Q9H1K0 RBSN Rabenosyn-5 1 T(0.11)RS(0.89)LDFR 68.893 0.039161 20380000 27285 43941 41363 39724 39246 35679 49492 28562 28293 35724 TRUE FALSE 29373.96058 41758.95384 42742.02178 36478.42213 37705.00484 37036.78935 42993.64095 32295.15147 30753.874 34558.32881 0.849982091 1.208361494 1.236808123 1.055560943 1.091054057 1.071718183 1.244089122 0.934511378 0.889912072 1 15.07674583 -7.795286661 24.14421231 0.934158282 1.112931701 0.321512027 0.110706171 148.3698353 105833.7139 0.059311291 0.02849536 1.60E-08 7.795286661 0.17877342 TRS(ph)LSSLR ddPTM_A459_MK2206_30min_R1 1 TRSLSSLR 8 1 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915 H0Y9X0 FRYL Protein furry homolog-like 1 T(0.34)RS(0.491)LS(0.148)S(0.021)LR 73.841 0.034184 11065000 2293.9 1911.5 1883.6 2108.2 2926.5 2050.4 1803.4 2330 1354.2 1166.1 TRUE FALSE 2098.791759 1787.061003 1755.74648 2270.573929 2809.931308 2166.491876 1683.098476 2309.629056 1494.973936 1310.565272 1.601440084 1.363580312 1.339686407 1.732514953 2.144060558 1.653097273 1.284253835 1.762315167 1.140709256 1 10.35597349 -8.389309839 4.575157851 1.008461688 1.604477863 0.453641473 0.238522864 0.217451073 6.613978146 0.249788228 0.065395427 4.08E-09 8.389309839 0.596016175 TRS(ph)LSSLR ddPTM_A459_MK2206_30min_R2 1 TRSLSSLR 8 1 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915 H0Y9X0 FRYL Protein furry homolog-like 1 T(0.356)RS(0.615)LS(0.022)S(0.006)LR 78.513 0.027935 11628000 4553.3 14360 10090 13555 15196 18357 15341 10210 14116 11547 TRUE FALSE 4901.904149 13646.90328 10426.39556 12447.51314 14599.32869 19055.5885 13326.70827 11544.48206 15343.78416 11170.22234 0.438836757 1.221721723 0.933409851 1.114347841 1.306986401 1.705927414 1.193056671 1.033505127 1.373632834 1 13.44737028 -4.761212462 24.59896002 1.216718707 0.438835818 0.545835347 0.210703182 3.605512754 389812.0018 0.055615586 0.313978576 1.73E-05 4.761212462 -0.77788289 TRS(ph)NPEGAEDR ddPTM_A459_MK2206_30min_R1 1 TRSNPEGAEDR 11 1 M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R3H9;M0R2I2 M0QXG9 BABAM1 BRISC and BRCA1-A complex member 1 1 T(0.053)RS(0.947)NPEGAEDR 134.04 0.0080926 30644000 2585.5 2391.8 2208 2301.8 2221.9 1937.2 2534 2813.5 851.89 2171.1 TRUE FALSE 2365.589648 2236.093385 2058.127112 2479.085035 2133.397018 2046.88259 2364.961484 2788.901866 940.447014 2440.072259 0.969475244 0.916404577 0.843469739 1.015988369 0.874317148 0.838861465 0.969217807 1.14295872 0.38541769 1 11.25270816 -8.245901654 24.99806173 0.692708734 0.939011266 0.281140452 0.161886035 864.60044 1391029.159 0.102064426 0.038275291 5.68E-09 8.245901654 0.246302532 TRS(ph)PDVISSASTALSQDIPEIASEALSR ddPTM_A459_MK2206_30min_R1 2 TRSPDVISSASTALSQDIPEIASEALSR 28 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 T(0.117)RS(0.489)PDVIS(0.063)S(0.289)AS(0.037)T(0.005)ALSQDIPEIASEALSR;T(0.21)RS(0.714)PDVIS(0.058)S(0.014)AS(0.002)T(0.001)ALSQDIPEIASEALSR 129.42 1.74E-12 55110000 1039.58 688.48 1163.61 1033.97 1012.37 581.27 849.85 1073.2 844.47 796.66 TRUE FALSE 951.1582619 643.6598269 1084.627395 1113.606549 972.0451592 614.1810051 793.1580571 1063.817126 932.2556785 895.3562553 1.062323803 0.718886838 1.211391989 1.243758048 1.085651832 0.685962712 0.885857504 1.188149543 1.041212001 1 9.806318023 TRS(ph)PDVISSASTALSQDIPEIASEALSR ddPTM_A459_MK2206_30min_R2 1 TRSPDVISSASTALSQDIPEIASEALSR 28 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 T(0.13)RS(0.561)PDVIS(0.124)S(0.124)AS(0.045)T(0.016)ALSQDIPEIASEALSR 97.289 6.06E-07 6088600 11341 10696 11868 14219 12667 8996.3 11609 9360 9642.8 11030 TRUE FALSE 12209.27568 10164.85219 12263.6732 13057.26222 12169.62993 9338.660501 10084.72436 10583.38414 10481.51331 10670.092 1.144252147 0.952648973 1.149350277 1.223725364 1.140536551 0.875218367 0.9451394 0.991873747 0.982326423 1 13.381285 -6.747548662 24.99781691 0.957542932 1.119848062 0.565316738 0.071530848 192.7625984 346896.0463 0.025524789 0.025399661 1.79E-07 6.747548662 0.16230513 TRSDIVSR ddPTM_A459_MK2206_30min_R1 1 TRSDIVSR 8 1 Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 Q15084-3 PDIA6 Protein disulfide-isomerase A6 0 106.68 0.03839 1055100 1119.2 1087.4 1102.1 1015.4 1027.7 837.99 1126.7 1584.5 602.37 606.1 FALSE TRUE 1024.006163 1016.610062 1027.292523 1093.606284 986.7645328 885.4362696 1051.539899 1570.646884 664.9885171 681.1882438 1.503264585 1.49240694 1.508089037 1.605439163 1.448593016 1.299840797 1.543684743 2.305745729 0.976218429 1 9.411909726 TRSDIVSR ddPTM_A459_MK2206_30min_R2 1 TRSDIVSR 8 1 Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 Q15084-3 PDIA6 Protein disulfide-isomerase A6 0 104.2 0.041707 2977000 5090.1 6785 6391.7 5398.2 6698.4 5561.1 6951.7 6894.1 6946.5 4703.6 FALSE TRUE 5479.80197 6448.066766 6604.796088 4957.149792 6435.387159 5772.731557 6038.93344 7795.182541 7550.694014 4550.121917 1.204319811 1.417119559 1.451564641 1.089454279 1.414332907 1.268698216 1.327202556 1.713181027 1.659448725 1 12.15168949 -7.568458801 24.44384406 1.515828026 1.312701589 0.076229901 0.207289874 180.397107 96741.65401 0.09259179 0.053457924 2.70E-08 7.568458801 -0.203126437 TRSPDVISSAS(ph)TALSQDIPEIASEALSR ddPTM_A459_MK2206_30min_R2 1 TRSPDVISSASTALSQDIPEIASEALSR 28 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 T(0.009)RS(0.015)PDVIS(0.174)S(0.174)AS(0.445)T(0.174)ALS(0.01)QDIPEIASEALSR 50.493 0.014402 9421600 5639 4297 3816.2 8072.1 4030.3 6490.3 7390.5 3762.2 6319.6 3430.7 TRUE FALSE 6070.726176 4083.617228 3943.430203 7412.583609 3872.050171 6737.292914 6420.118472 4253.932458 6869.267385 3318.75654 1.829217089 1.230466043 1.188225215 2.233542449 1.16671715 2.030065428 1.934495163 1.281785032 2.069831668 1 11.69642708 TRSPDVISSASTALSQDIPEIASEALSR ddPTM_A459_MK2206_30min_R1 1 TRSPDVISSASTALSQDIPEIASEALSR 28 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 0 152.52 4.75E-14 2766600 254.43 262.62 189.22 295.13 281.9 348.31 306.77 245.9 286.13 46.124 FALSE TRUE 232.7893924 245.5233903 176.3762736 317.8609637 270.6713261 368.0310112 286.305933 243.7501222 315.8742374 51.83818934 4.49069297 4.73634194 3.402438933 6.131791403 5.221465671 7.099611616 5.523069704 4.702134186 6.093465869 1 5.695943422 -5.764506603 24.99920649 5.369203956 4.262476416 0.047244561 1.571532115 187.3076198 1526657.296 0.409838355 0.638409471 1.72E-06 5.764506603 -1.10672754 TRT(ph)PASINATPANINLADLTR ddPTM_A459_MK2206_30min_R2 2 TRTPASINATPANINLADLTR 21 1 Q7KZ85;Q7KZ85-2 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 T(0.092)RT(0.908)PASINATPANINLADLTR;T(0.191)RT(0.801)PAS(0.007)INATPANINLADLTR 90.476 0.002867 9394100 57034.5 62297.3 53589 72565 55647 59454 73388 52943.4 59355 67166.3 TRUE FALSE 61401.10517 59203.70667 55375.63051 66636.20738 53462.01918 61716.56363 63752.06745 59863.28416 64517.59061 64974.66913 0.945000659 0.911181349 0.85226491 1.025572092 0.822813258 0.949855759 0.98118341 0.921332651 0.992965281 1 15.98758976 -7.93159877 0.729768037 0.999513495 0.914241679 0.212800153 0.054804619 1.03700205 1.106692807 0.049874379 0.022445135 1.17E-08 7.93159877 -0.085271815 TRTDS(ph)YSAGQSVEILDGVELGEPAHK ddPTM_A459_MK2206_30min_R1 1 TRTDSYSAGQSVEILDGVELGEPAHK 26 1 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 T(0.101)RT(0.117)DS(0.268)Y(0.132)S(0.157)AGQS(0.224)VEILDGVELGEPAHK 63.453 0.0013436 4088600 722.84 880.31 806.55 775.25 961.36 1050.5 1071.9 1142.4 867.72 1066.9 TRUE FALSE 661.3586622 823.001659 751.8036332 834.9598893 923.0669955 1109.978402 1000.395507 1132.412117 957.9225992 1199.075627 0.551557089 0.686363429 0.626986002 0.696336303 0.769815494 0.925695075 0.834305597 0.944404249 0.798884222 1 10.22770694 -6.355316801 1.425954233 0.897726162 0.622762035 0.796680472 0.062368182 0.174521247 0.716488203 0.022838852 0.029249579 4.41E-07 6.355316801 -0.274964128 TS(ph)DANETEDHLESLICK ddPTM_A459_MK2206_30min_R1 1 TSDANETEDHLESLICK 17 0 F2Z2T1;Q09161 F2Z2T1 NCBP1 Nuclear cap-binding protein subunit 1 1 T(0.422)S(0.578)DANETEDHLESLICK 144.5 0.00032654 6718600 4908.3 5228.1 5018 3828.8 3645.9 2567.1 2694.1 2473.5 2867.1 3174.1 TRUE FALSE 4490.82331 4887.74974 4677.392141 4123.694839 3500.676083 2712.446984 2514.381505 2451.87445 3165.145305 3567.331471 1.258874693 1.370141737 1.311173963 1.155960659 0.981315056 0.760357428 0.7048354 0.687313324 0.887258538 1 11.80062956 -6.289195209 1.696445141 0.781231773 1.319824701 0.84931811 0.0934197 0.122789043 0.69937895 0.033143784 0.043376057 5.14E-07 6.289195209 0.538592928 TS(ph)DANETEDHLESLICK ddPTM_A459_MK2206_30min_R2 2 TSDANETEDHLESLICK 17 0 F2Z2T1;Q09161 F2Z2T1 NCBP1 Nuclear cap-binding protein subunit 1 1 T(0.432)S(0.568)DANETEDHLESLICK;T(0.416)S(0.584)DANETEDHLESLICK 164.89 2.38E-06 15784600 117646 115709 98586 108820 87452 57477 79955 55438 50282 54928 TRUE FALSE 126653.0682 109963.0593 101872.808 99929.0579 84018.19507 59664.32751 69456.81246 62683.93695 54655.43747 53135.70386 2.383577501 2.069475914 1.917219509 1.880638641 1.581200379 1.122866984 1.30715898 1.179695241 1.028600988 1 15.69739397 -5.999107836 0.529330477 1.007790167 2.503043796 0.95199941 0.10188672 0.29524848 0.14672894 0.080128362 0.238324773 1.00E-06 5.999107836 1.495253629 up TS(ph)DDEVGSPKEESR ddPTM_A459_MK2206_30min_R2 1 TSDDEVGSPKEESR 14 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9 Q6ULP2-7 AFTPH Aftiphilin 1 T(0.103)S(0.552)DDEVGS(0.345)PKEESR 119.17 0.012454 0 13658 11643 13513 13022 12656 8254 13754 9634.2 10216 13904 TRUE FALSE 14703.66698 11064.82555 13963.51668 11958.06094 12159.06185 8568.111754 11948.08328 10893.42302 11104.56921 13450.31362 1.093183951 0.822644428 1.038155471 0.889054433 0.903998389 0.637019478 0.888312616 0.809901042 0.825599278 1 13.71535219 -6.206556346 2.433287911 0.823104063 0.965954534 0.23205473 0.10897003 0.407028006 4.73647712 0.033717369 0.044550762 6.22E-07 6.206556346 0.142850472 TS(ph)DSDQQAYLVQR ddPTM_A459_MK2206_30min_R1 1 TSDSDQQAYLVQR 13 0 Q96CV9-3;Q96CV9-2;Q96CV9 Q96CV9-3 OPTN Optineurin 1 T(0.192)S(0.733)DS(0.075)DQQAYLVQR 176.56 0.00010155 23740000 3170.7 3557.4 3865.5 2886.8 3454.7 2628.6 2883.6 2808.6 2507.1 2615.3 TRUE FALSE 2901.015315 3325.812613 3603.12063 3109.141836 3317.091984 2777.42906 2691.240305 2784.044706 2767.722017 2939.303109 0.986973853 1.131496988 1.225841806 1.057781971 1.128530084 0.944927746 0.915604892 0.947178499 0.941625247 1 11.52125843 -6.765099514 24.99658573 0.944424504 1.111499726 0.627310116 0.060075959 59.91376188 409172.8691 0.021007879 0.01924568 1.72E-07 6.765099514 0.167075222 TS(ph)DSDQQAYLVQR ddPTM_A459_MK2206_30min_R2 1 TSDSDQQAYLVQR 13 0 Q96CV9-3;Q96CV9-2;Q96CV9 Q96CV9-3 OPTN Optineurin 1 T(0.01)S(0.957)DS(0.033)DQQAYLVQR 150.9 0.00047993 32895000 20079 28849 29307 20040 25890 22178 29496 18096 21086 20915 TRUE FALSE 21616.26368 27416.40061 30284.08075 18402.6679 24873.42851 23021.99933 25623.13977 20461.20933 22920.02217 20232.54526 1.068390724 1.355064341 1.496800346 0.909557728 1.229377134 1.137869657 1.266431852 1.011301795 1.132829403 1 14.3043902 -7.573024828 0.3145545 0.988056982 1.284735575 0.16077164 0.155377881 2.784829015 0.855040681 0.246421914 0.295678647 2.67E-08 7.573024828 0.296678593 TS(ph)DTETEPSK ddPTM_A459_MK2206_30min_R2 3 TSDTETEPSK 10 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.118)S(0.882)DTETEPSK;T(0.027)S(0.973)DTETEPSK;T(0.122)S(0.877)DTETEPSK 167.11 0.00030572 13376200 203450 167402 143220 169393 145513 128859 260779 236733 112649 188789 TRUE FALSE 219026.2884 159089.0601 147994.8833 155553.05 139799.4285 133762.8195 226538.404 267674.8159 122447.0064 182628.8304 1.199297438 0.871105946 0.810358819 0.851744216 0.765483895 0.732429919 1.240430679 1.46567667 0.670469203 1 17.47855501 -7.264444114 24.99645407 1.132950529 0.863179708 0.184421875 0.222805358 389.3148456 3238695.26 0.089524002 0.063315078 5.44E-08 7.264444114 -0.269770821 TS(ph)DVGGYYYEK ddPTM_A459_MK2206_30min_R2 1 TSDVGGYYYEK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.172)S(0.828)DVGGYYYEK 119.25 0.0050732 34728000 73673 70023 69718 67037 74716 51869 76812 59042 52541 75002 TRUE FALSE 79313.46152 66545.75964 72042.36332 61559.86266 71782.27442 53842.91114 66726.49213 66758.99212 57110.92121 72554.69088 1.093154151 0.917180665 0.99293874 0.848461511 0.989354011 0.742101034 0.919671648 0.920119586 0.787143057 1 16.14678127 -1.522878948 0.702103675 0.882450743 25.97617022 0.332875305 0.082055398 319.7477341 1.683126958 0.030293868 12600.1067 0.029999986 1.522878948 25.09371947 TS(ph)FSPPALEMHHPVT(ph)QS(ph)T(ph)FLGTK ddPTM_A459_MK2206_30min_R1 1 TSFSPPALEMHHPVTQSTFLGTK 23 0 Q5FWF5-2;Q5FWF5 Q5FWF5-2 ESCO1 N-acetyltransferase ESCO1 4 T(0.05)S(0.475)FS(0.475)PPALEMHHPVT(0.75)QS(0.75)T(0.75)FLGT(0.75)K 47.752 0.034059 461230 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 TS(ph)FSVGSDDELGPIR ddPTM_A459_MK2206_30min_R1 2 TSFSVGSDDELGPIR 15 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 T(0.025)S(0.942)FS(0.01)VGS(0.023)DDELGPIR;T(0.022)S(0.544)FS(0.054)VGS(0.38)DDELGPIR 169.17 6.11E-05 9055300 1942.39 2349.88 2287.99 1740.31 2153.2 1618.07 1912.05 1646.21 1730.2 1732.46 TRUE FALSE 1777.179531 2196.902385 2132.687614 1874.348978 2067.433485 1709.683725 1784.500633 1631.81736 1910.060482 1947.090224 0.912736096 1.128300249 1.095320385 0.96264105 1.06180672 0.878071136 0.916496119 0.838079992 0.98098201 1 10.92710402 -6.75879588 24.99996926 0.912216486 1.037148632 0.358142221 0.072419299 68.53511652 648147.3305 0.023800194 0.022775181 1.74E-07 6.75879588 0.124932146 TS(ph)GETTQTHTEPTGDSK ddPTM_A459_MK2206_30min_R2 1 TSGETTQTHTEPTGDSK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.19)S(0.802)GET(0.001)T(0.001)QT(0.006)HTEPTGDSK 138.28 0.00033693 6007500 23549 22907 15833 21649 14732 11327 29664 21040 9099.4 18451 TRUE FALSE 25351.92955 21769.47169 16360.86432 19880.20745 14153.54766 11758.05692 25769.08117 23790.00024 9890.849364 17848.94538 1.420360083 1.219650306 0.916629188 1.113802918 0.792962685 0.658753594 1.443731303 1.332851871 0.554141948 1 14.12355121 -4.996293701 2.902540099 0.992307188 1.42154032 0.229677477 0.261856451 0.464803841 7.275686651 0.070759237 0.37212418 1.01E-05 4.996293701 0.429233132 TS(ph)IIEAQYLR ddPTM_A459_MK2206_30min_R2 1 TSIIEAQYLR 10 0 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 T(0.18)S(0.82)IIEAQYLR 84.169 0.038337 1313400 10417 10426 9601.7 12659 9427.5 9620.1 11708 8808.6 7925.1 9996.8 TRUE FALSE 11214.53353 9908.260001 9921.815886 11624.71921 9057.328981 9986.199647 10170.72554 9959.914264 8614.410873 9670.605235 1.159651672 1.024574963 1.025976725 1.202067391 0.936583467 1.032634401 1.051715512 1.029916331 0.890783013 1 13.23939047 -6.841493061 0.524368629 0.967625701 1.09900616 0.276028986 0.074009755 1.471182128 0.868027675 0.066443002 0.078794513 1.44E-07 6.841493061 0.131380459 TS(ph)LADSSIFDSK ddPTM_A459_MK2206_30min_R2 2 TSLADSSIFDSK 12 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;C9J0L6;C9JDV9;C9JTI2;C9J1C4;C9JDB4 Q9H8V3-2 ECT2 Protein ECT2 1 T(0.111)S(0.889)LADSSIFDSK;T(0.134)S(0.865)LADS(0.001)SIFDSK 88.552 0.026992 4357400 30396 29844 31268 30964 29824 26743 33771 22507 22675 30683 TRUE FALSE 32723.14113 28361.99036 32310.45951 28434.14215 28652.95991 27760.7236 29336.82713 25448.74218 24647.23051 29681.81622 1.102464246 0.955534195 1.088560729 0.957965036 0.965337151 0.93527712 0.98837709 0.857384939 0.830381481 1 14.85729175 -6.286285861 0.693744295 0.900868691 1.055013391 0.415420306 0.062379036 0.791336435 0.820222961 0.038884055 0.069098643 5.17E-07 6.286285861 0.1541447 TS(ph)LDLR ddPTM_A459_MK2206_30min_R2 1 TSLDLR 6 0 Q5T457;A0A0A0MRN9;Q9GZV1-2;Q9GZV1 Q5T457 ANKRD2 Ankyrin repeat domain-containing protein 2 1 T(0.222)S(0.778)LDLR 90.37 0.046914 1639700 33303 22965 21443 25822 28942 25323 36671 27224 20704 34450 TRUE FALSE 35852.70329 21824.59149 22157.89892 23712.26 27805.59166 26286.68451 31856.05365 30782.27027 22504.7965 33325.89932 1.075821029 0.654883797 0.66488525 0.711526485 0.834353828 0.788776448 0.955894794 0.923674106 0.675294499 1 15.02435619 -6.893188794 2.214867654 0.880069394 0.765780474 0.093894617 0.138449885 0.702248014 7.022023337 0.056757468 0.047988731 1.28E-07 6.893188794 -0.11428892 TS(ph)PADHGGSVGSESGGSAVDSVAGEHSVSGR ddPTM_A459_MK2206_30min_R2 1 TSPADHGGSVGSESGGSAVDSVAGEHSVSGR 31 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.162)S(0.836)PADHGGS(0.002)VGSESGGSAVDSVAGEHSVSGR 159.38 2.79E-23 12833000 25150 16553 17020 25316 19560 24926 21820 20221 14333 21205 TRUE FALSE 27075.50334 15731.00209 17587.43831 23247.60182 18791.97612 25874.5764 18955.00779 22863.95413 15579.65843 20513.08259 1.319913924 0.766876554 0.857376663 1.133306109 0.916097132 1.261369484 0.924044824 1.114603524 0.759498645 1 14.32425669 -8.254014275 24.83103114 0.879749319 1.024661177 0.110362229 0.17560343 1100.034768 3678770.582 0.119009682 0.042934877 5.57E-09 8.254014275 0.144911858 TS(ph)PAPWK ddPTM_A459_MK2206_30min_R2 2 TSPAPWK 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.358)S(0.642)PAPWK;T(0.019)S(0.981)PAPWK 82.279 0.041457 13204900 174662 165279 154935 149448 143347 111506 151434 126960 108780 180751 TRUE FALSE 188034.257 157071.4852 160100.4556 137237.6203 137718.4765 115749.439 131550.5339 143554.1079 118241.4878 174853.1097 1.075384117 0.898305358 0.9156283 0.784873775 0.787623833 0.661981015 0.752348838 0.820998312 0.676233257 1 17.41578393 -4.843120519 0.889521376 0.766600787 1.201347389 0.474615441 0.092367371 1.662845732 1.093182385 0.031404068 0.694268028 1.44E-05 4.843120519 0.434746602 TS(ph)PDPSPVSAAPSK ddPTM_A459_MK2206_30min_R2 1 TSPDPSPVSAAPSK 14 0 Q13469-5;Q13469-3;Q13469-4;Q13469-2;Q13469 Q13469-5 NFATC2 "Nuclear factor of activated T-cells, cytoplasmic 2" 1 T(0.242)S(0.756)PDPS(0.002)PVSAAPSK 86.738 0.040276 0 44130 50398 59499 58238 48265 42987 62091 44170 46833 54344 TRUE FALSE 47508.62673 47895.30861 61482.66696 53479.76911 46369.87359 44622.90041 53938.37712 49943.17066 50906.44969 52570.75973 0.903708202 0.911063657 1.169522131 1.017291159 0.882046861 0.84881597 1.026014792 0.95001805 0.968341526 1 15.68197296 -1.627721351 19.4717326 0.967645546 0.020496382 0 0.087590486 0 0 0.021233493 0 0.023565608 1.627721351 -0.947149164 TS(ph)PDTLR ddPTM_A459_MK2206_30min_R1 2 TSPDTLR 7 0 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.228)S(0.772)PDTLR;T(0.226)S(0.773)PDT(0.001)LR 127.46 0.0053382 251810000 16383.3 16227.4 16424.7 13019.6 13580.2 12875.5 15822.2 13341 14472.5 16701.2 TRUE FALSE 14989.8143 15170.99331 15309.83713 14022.37185 13039.27188 13604.49968 14766.72991 13224.36104 15976.96817 18770.27074 0.798593398 0.808245844 0.81564285 0.747052189 0.694676814 0.724789742 0.786708413 0.704537576 0.851184748 1 14.19616184 -8.569231036 4.591400063 0.999923004 0.761046628 0.769286534 0.040560474 0.123002926 8.643395808 0.042951498 0.011197708 2.70E-09 8.569231036 -0.238876376 TS(ph)PDTLR ddPTM_A459_MK2206_30min_R2 2 TSPDTLR 7 0 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.226)S(0.773)PDTLR;T(0.23)S(0.77)PDTLR 136.27 0.0028157 1312550000 6053700 6197500 5833300 5749700 5616900 4648500 5974500 4975500 4162200 5541600 TRUE FALSE 6517175.927 5889741.162 6027779.311 5279931.118 5396352.283 4825401.925 5190040.973 5625814.933 4524220.632 5360778.046 1.215714561 1.098672825 1.124422474 0.984918807 1.006636021 0.900130892 0.968150692 1.049440004 0.843948508 1 22.35401097 -5.477029734 0.96538913 0.955312311 1.212157515 0.67446668 0.058775057 0.502811775 0.734690454 0.021338866 0.107649072 3.33E-06 5.477029734 0.256845204 TS(ph)PDTLRR ddPTM_A459_MK2206_30min_R1 1 TSPDTLRR 8 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.232)S(0.767)PDTLRR 110.38 0.0061853 209010000 6285.7 5945.8 6780.8 5513.9 5560.2 4895.6 5601.2 5748.5 4137.1 4054.5 TRUE FALSE 5751.068207 5558.727339 6320.538188 5938.581533 5338.72546 5172.784641 5227.554168 5698.241471 4567.16635 4556.80207 1.262084269 1.219874652 1.387055679 1.303234471 1.171594767 1.135178698 1.147197988 1.250491328 1.002274463 1 12.15380599 -7.694678389 0.412989164 0.99150739 1.306509183 0.626094527 0.07179953 0.775953516 0.34774089 0.087742879 0.076360109 2.02E-08 7.694678389 0.315001794 TS(ph)PHWK ddPTM_A459_MK2206_30min_R2 1 TSPHWK 6 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 T(0.221)S(0.779)PHWK 74.255 0.045904 8013300 97213 103260 100230 97949 93098 82656 115490 92330 75140 101830 TRUE FALSE 104655.702 98132.25855 103571.6182 89946.25338 89442.50474 85801.532 100326.0243 104397.848 81675.54138 98507.29544 1.062415749 0.996192801 1.051410636 0.913092304 0.907978484 0.871017031 1.018462885 1.059798135 0.829131904 1 16.58794295 -5.756658784 24.97809004 0.943987447 1.03262505 0.288848669 0.067402854 167.0008626 872547.8368 0.018918529 0.031462292 1.75E-06 5.756658784 0.088637603 TS(ph)PINEDIR ddPTM_A459_MK2206_30min_R2 3 TSPINEDIR 9 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 T(0.169)S(0.831)PINEDIR;T(0.225)S(0.775)PINEDIR;T(0.224)S(0.776)PINEDIR 131.42 0.0036081 52415000 201976 186340 183111 197035 164265 152638 205339 161436 130604 202050 TRUE FALSE 217439.4379 177086.6266 189215.8293 180936.6102 157815.1307 158446.746 178377.7426 182536.2395 141963.6998 195457.125 1.112466163 0.906012644 0.968068211 0.925709974 0.807415594 0.810647072 0.912618267 0.933894016 0.72631632 1 17.57649265 -1.522878745 0.759787122 0.868562277 44.37411018 0.430603863 0.078214387 374.6583188 1.552923229 0.028234343 27931.69419 0.03 1.522878745 43.5055479 TS(ph)PINLGLNVNDLLK ddPTM_A459_MK2206_30min_R2 2 TSPINLGLNVNDLLK 15 0 P50616 P50616 TOB1 Protein Tob1 1 T(0.43)S(0.57)PINLGLNVNDLLK;T(0.028)S(0.972)PINLGLNVNDLLK 220.72 1.98E-09 173550000 356730 382170 358240 427040 370580 314540 429630 326060 296900 438570 TRUE FALSE 384041.5231 363191.9935 370183.5428 392149.466 356029.1672 326510.0401 373219.0649 368677.1615 322723.8253 424259.4968 0.905204305 0.856060963 0.872540381 0.924315116 0.839177838 0.769599838 0.879695252 0.868989768 0.760675548 1 18.69458743 -4.759662087 23.95011162 0.858358819 0.905204389 0.030144067 0.065555475 103.0241946 1387598.946 0.015639118 0.097607956 1.74E-05 4.759662087 0.04684557 TS(ph)PITR ddPTM_A459_MK2206_30min_R1 2 TSPITR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.097)S(0.903)PITR;T(0.225)S(0.775)PITR 108.09 0.02569 47992100 15064.1 13190.7 10590.8 10181.9 6605.8 6818.3 13604.6 13438.2 1210.51 10233 TRUE FALSE 13782.81919 12331.98303 9871.926004 10966.1117 6342.676998 7204.346254 12697.06196 13320.71123 1336.346846 11500.7413 1.198428765 1.072277231 0.858373017 0.953513467 0.55150158 0.626424512 1.104021178 1.158248055 0.116196584 1 13.48943923 -5.135151812 1.333193394 0.786876714 1.254312881 0.193482522 0.289513846 1.333677928 3.230449943 0.088707684 0.71164003 7.33E-06 5.135151812 0.467436167 TS(ph)PITR ddPTM_A459_MK2206_30min_R2 4 TSPITR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.017)S(0.983)PITR;T(0.225)S(0.775)PITR;T(0.223)S(0.777)PITR;T(0.027)S(0.973)PITR 116.9 0.022728 307108000 1185720 971620 956260 1006920 1092970 809160 1017750 1093330 997350 1082190 TRUE FALSE 1276499.635 923370.7637 988141.2311 924651.415 1050054.506 839953.1508 884118.2025 1236231.985 1084097.7 1046878.229 1.219339174 0.882023084 0.94389319 0.883246389 1.003034046 0.802340834 0.844528215 1.180874672 1.035552818 1 19.99766221 -7.758728945 24.99999986 1.081160303 0.932682786 0.21067721 0.116459232 98.68450068 910255.7448 0.056770697 0.030877419 1.74E-08 7.758728945 -0.148477516 TS(ph)PKPAVVETVTTAK ddPTM_A459_MK2206_30min_R2 1 TSPKPAVVETVTTAK 15 1 P56192;H0YI94;H0YIP0 P56192 MARS "Methionine--tRNA ligase, cytoplasmic" 1 T(0.209)S(0.791)PKPAVVETVTTAK 83.666 0.012677 5954700 61175 48318 49894 40329 40443 27789 59714 42218 33249 55185 TRUE FALSE 65858.60504 45918.59838 51557.44106 37033.99169 38855.00461 28846.52987 51873.48007 47736.03756 36140.93792 53384.31797 1.233669503 0.860151448 0.965778772 0.69372417 0.727835553 0.540355875 0.971698844 0.894195887 0.676995404 1 15.70412838 -3.129840576 1.051125797 0.786946934 14.16942801 0.441945373 0.142664352 46.99148977 2.196897486 0.044671883 1385.896508 0.000741582 3.129840576 13.38248107 TS(ph)PNSLVAYINNSR ddPTM_A459_MK2206_30min_R2 1 TSPNSLVAYINNSR 14 0 P10070 P10070 GLI2 Zinc finger protein GLI2 1 T(0.224)S(0.774)PNS(0.002)LVAYINNSR 105.17 0.0059258 3763500 9777.9 16107 14488 17100 16412 16214 17002 13278 13650 12290 TRUE FALSE 10526.50354 15307.1498 14971.02269 15702.8753 15767.58242 16831.03513 14769.61698 15013.48019 14837.25233 11888.97831 0.885400181 1.28750759 1.259235428 1.320792661 1.326235275 1.415683896 1.242294888 1.262806593 1.2479838 1 13.53733712 -4.760650605 24.99985022 1.278583434 0.885399725 0.548557252 0.101692518 13.3588175 423137.4814 0.023692451 0.138601561 1.74E-05 4.760650605 -0.39318371 TS(ph)PPGGELSPGAGR ddPTM_A459_MK2206_30min_R2 1 TSPPGGELSPGAGR 14 0 Q99958 Q99958 FOXC2 Forkhead box protein C2 1 T(0.137)S(0.863)PPGGELSPGAGR 74.987 0.045218 4812600 20542 27905 29829 25345 30278 25632 29853 26871 26969 23846 TRUE FALSE 22114.71131 26519.27828 30823.48397 23274.23243 29089.13359 26607.44372 25933.26524 30383.13196 29314.71487 23067.90697 0.958678711 1.149617879 1.336206358 1.008944264 1.261021801 1.153439874 1.124214055 1.31711698 1.27080081 1 14.49359949 -4.789124417 4.292320194 1.191563307 0.943163149 0.263838153 0.111393342 0.249917953 9.25019669 0.026624082 0.183731437 1.63E-05 4.789124417 -0.248400157 TS(ph)PPLLDR ddPTM_A459_MK2206_30min_R1 3 TSPPLLDR 8 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.223)S(0.777)PPLLDR;T(0.072)S(0.928)PPLLDR;T(0.322)S(0.678)PPLLDR 148.69 0.0015317 71306200 12696.9 19959.6 13918.5 11694 11761.1 11414.5 13066.5 11979.2 12240.8 12912.3 TRUE FALSE 11616.96198 18660.22641 12973.751 12594.67391 11292.63048 12060.77913 12194.85763 11874.46712 13513.27496 14511.97321 0.800508781 1.28585039 0.894003235 0.867881557 0.778159546 0.831091606 0.84033077 0.818253104 0.931181086 1 13.82495608 -5.498000363 24.74129179 0.855015853 1.054866433 0.236225027 0.123727478 719.7809427 715813.3295 0.029717541 0.061381569 3.18E-06 5.498000363 0.19985058 TS(ph)PPLLDR ddPTM_A459_MK2206_30min_R2 1 TSPPLLDR 8 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.138)S(0.862)PPLLDR 93.649 0.023767 2529000 22147 25401 21780 26131 26779 23702 24951 19052 20950 21964 TRUE FALSE 23842.59135 24139.62328 22506.13433 23996.01371 25727.52191 24603.99622 21674.90373 21542.16182 22772.19313 21247.31648 1.122146007 1.136125746 1.059245969 1.129366795 1.210859825 1.15798135 1.020124294 1.013876827 1.071767964 1 14.37499302 -7.266294167 24.89042578 1.027598667 1.135580701 0.654781039 0.03895112 277.5040401 1422753.94 0.017432438 0.012188065 5.42E-08 7.266294167 0.107982034 TS(ph)PQELSEELSR ddPTM_A459_MK2206_30min_R1 1 TSPQELSEELSR 12 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-2;Q96PU5-3;K7ERN1;Q96PU5-9;Q96PU5-6;Q96PU5-5 A0A1B0GVY1;Q96PU5-9 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 T(0.232)S(0.768)PQELSEELSR 99.732 0.014097 8330700 1493.1 1348.4 1376.9 1125.2 1452.2 1453.8 1581.2 1720.1 1779.9 2034.3 TRUE FALSE 1366.104004 1260.618915 1283.439864 1211.863099 1394.355799 1536.1129 1475.721033 1705.061347 1964.926974 2286.324442 0.597511 0.55137359 0.561355091 0.530048613 0.609867862 0.671870042 0.645455652 0.745765262 0.859426133 1 11.15881443 -8.167294672 0.657770578 1.005991724 0.559321328 0.961971508 0.027916489 0.123512733 0.120027715 0.028502711 0.012882233 6.80E-09 8.167294672 -0.446670396 TS(ph)PSGGTWSSVVSGAK ddPTM_A459_MK2206_30min_R2 1 TSPSGGTWSSVVSGAK 16 0 F8WB06;F8VRK6 F8WB06 ATXN2 1 T(0.128)S(0.872)PSGGTWSSVVSGAK 288.06 1.70E-74 14788000 68161 101840 83106 92793 96192 84739 104720 77966 75141 104630 TRUE FALSE 73379.45857 96782.77369 85876.71256 85211.51507 92415.01875 87963.80202 90970.13821 88156.4239 81676.62836 101215.9317 0.724979332 0.956200986 0.848450547 0.841878484 0.913048146 0.869070714 0.898772918 0.870973793 0.806954271 1 16.62707687 -11.9375892 2.291683556 2.209862612 0.864393623 0.331739579 0.059615186 2471007.47 473552.1089 15457527.69 0.01380617 1.15E-12 11.9375892 -1.345468988 TS(ph)PSGGTWSSVVSGVPR ddPTM_A459_MK2206_30min_R2 1 TSPSGGTWSSVVSGVPR 17 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4 Q99700 ATXN2 Ataxin-2 1 T(0.224)S(0.776)PSGGTWSSVVSGVPR 106.6 0.0025328 12953000 30619 41753 34858 33933 46767 35873 40960 28667 30414 42334 TRUE FALSE 32963.21418 39679.60673 36020.14832 31160.56535 44930.69259 37238.17215 35581.9028 32413.87533 33059.35474 40952.64505 0.804910504 0.968914381 0.879556089 0.760892619 1.097137744 0.90929834 0.868854814 0.791496503 0.807258108 1 15.32166902 -10.67634984 4.913958075 1.000004536 0.880620818 0.13232257 0.094355408 8.70E-06 1.50E-06 0.093053194 0.022567153 2.11E-11 10.67634984 -0.119383718 TS(ph)PSSPAPLPHQEATPR ddPTM_A459_MK2206_30min_R2 1 TSPSSPAPLPHQEATPR 17 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 T(0.352)S(0.648)PSSPAPLPHQEATPR 268.08 1.77E-51 5621600 12496 10898 13338 14761 12226 12522 16238 11881 12893 13990 TRUE FALSE 13452.70337 10356.82117 13782.68226 13554.97908 11745.94581 12998.53348 14105.93109 13433.88749 14014.40983 13533.50745 0.994029332 0.765272507 1.018411695 1.001586554 0.867915864 0.960470413 1.04229677 0.992639014 1.035534202 1 13.72424817 -7.055601778 5.638981348 1.015812351 0.927817476 0.25694485 0.07067954 0.309848439 21.47554664 0.02707427 0.02121623 8.80E-08 7.055601778 -0.087994875 TS(ph)PSVTPTPAR ddPTM_A459_MK2206_30min_R2 1 TSPSVTPTPAR 11 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 T(0.035)S(0.965)PSVTPTPAR 107.34 0.0106 15405000 45746 48715 45298 48286 41287 42443 56373 41139 48326 55165 TRUE FALSE 49248.34893 46295.88394 46808.21271 44340.87934 39665.86493 44058.19811 48971.15738 46516.00855 52529.30813 53364.97057 0.922859104 0.867533205 0.877133674 0.8308986 0.743294047 0.825601469 0.917664844 0.871658094 0.984340618 1 15.70360543 -8.165021048 1.370560847 1.004343709 0.84621273 0.559530057 0.048164281 0.335825219 1.170961706 0.048795912 0.015594839 6.84E-09 8.165021048 -0.158130979 TS(ph)PTVATQTGASATSTR ddPTM_A459_MK2206_30min_R2 1 TSPTVATQTGASATSTR 17 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 T(0.371)S(0.626)PT(0.002)VATQTGASATSTR 110.6 0.0021148 26249000 14899 17764 14627 17245 17682 17776 20365 15596 16208 18231 TRUE FALSE 16039.6789 16881.86559 15114.65688 15836.02834 16987.71584 18452.47814 17691.05104 17634.45075 17617.74254 17636.12396 0.909478689 0.957232192 0.857028274 0.897931335 0.963234091 1.046288752 1.003114464 0.999905126 0.99895774 1 14.1062459 -6.471555904 3.916900204 1.009271349 0.906502188 0.776096675 0.026316412 0.110758454 3.482589953 0.008943202 0.009851669 3.38E-07 6.471555904 -0.102769161 TS(ph)PYILR ddPTM_A459_MK2206_30min_R1 3 TSPYILR 7 0 P49454 P49454 CENPF Centromere protein F 1 T(0.228)S(0.772)PYILR;T(0.202)S(0.798)PYILR;T(0.222)S(0.778)PYILR 127.46 0.0053382 9296700 9229.6 9503.2 8989.9 7206.1 7111.4 7143.6 7952 6877.1 7029.1 6781.3 TRUE FALSE 8444.574053 8884.539953 8379.690635 7761.115071 6828.137879 7548.064459 7421.536589 6816.97424 7759.800099 7621.41864 1.108005537 1.165733097 1.099492238 1.018329452 0.895914291 0.990375259 0.973773642 0.894449519 1.018156916 1 12.89584385 -5.815371871 2.720513187 0.958620983 1.135231782 0.756707429 0.041195735 0.115279438 1.735117647 0.011557649 0.019817194 1.53E-06 5.815371871 0.176610799 TS(ph)PYILR ddPTM_A459_MK2206_30min_R2 2 TSPYILR 7 0 P49454 P49454 CENPF Centromere protein F 1 T(0.18)S(0.82)PYILR;T(0.228)S(0.772)PYILR 127.46 0.0053382 39436000 201027 232598 197917 224283 218048 202581 235166 200601 189869 244654 TRUE FALSE 216417.7817 221047.5215 204515.454 205958.3615 209486.3399 210290.3619 204288.4217 226820.2395 206383.4624 236670.96 0.914424743 0.933986669 0.864134129 0.870230811 0.885137492 0.888534706 0.863174856 0.958377992 0.87202698 1 17.85252317 -10.29619064 0.567481808 1.021619316 0.892012954 0.51585409 0.030476274 13.66758072 2.992676866 0.573373931 0.013093997 5.06E-11 10.29619064 -0.129606362 TS(ph)SEDNLYLAVLR ddPTM_A459_MK2206_30min_R1 1 TSSEDNLYLAVLR 13 0 Q15149-4 Q15149-4 PLEC Plectin 1 T(0.278)S(0.443)S(0.278)EDNLYLAVLR 154.13 0.00014073 0 258.28 461.36 428.39 420.04 302.24 307.65 367.23 378.32 328.98 226.12 TRUE FALSE 236.3119297 431.3253801 399.3120804 452.3915536 290.2011408 325.0688771 342.7327567 375.0123881 363.1786483 254.1334527 0.929873368 1.697239681 1.571269253 1.780133818 1.141924204 1.27912667 1.348632984 1.475651411 1.42908635 1 7.989442486 -6.279909469 24.944276 1.306333814 1.514575567 0.146159624 0.248216695 1637.991852 2212139.634 0.076506544 0.086915851 5.25E-07 6.279909469 0.208241754 TS(ph)SEDNLYLAVLR ddPTM_A459_MK2206_30min_R2 3 TSSEDNLYLAVLR 13 0 Q15149-4 Q15149-4 PLEC Plectin 1 T(0.002)S(0.97)S(0.028)EDNLYLAVLR;T(0.026)S(0.923)S(0.051)EDNLYLAVLR;T(0.001)S(0.926)S(0.073)EDNLYLAVLR 241.27 7.04E-18 46232500 132123 153232 141598 151765 155178 133942 171778 138103 140352 151903 TRUE FALSE 142238.4385 145622.7217 146318.8066 139365.314 149084.932 139039.2567 149223.3423 156153.5363 152559.5633 146946.4176 0.967961253 0.990991983 0.995728981 0.948409062 1.014553022 0.946190176 1.015494932 1.062656299 1.038198588 1 17.16493066 -7.500048915 9.044399847 1.038115936 0.979250422 0.528661559 0.024253996 0.21348896 80.52200538 0.009782158 0.006340251 3.16E-08 7.500048915 -0.058865514 TS(ph)SFHLLR ddPTM_A459_MK2206_30min_R2 1 TSSFHLLR 8 0 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 T(0.002)S(0.499)S(0.499)FHLLR 89.029 0.020004 1993300 11000 20708 12747 20831 24083 26614 27244 21038 19463 14091 TRUE FALSE 11842.16846 19679.67083 13171.97862 19129.04066 23137.38041 27626.81442 23666.83007 23787.73883 21155.85656 13631.21182 0.868753902 1.443721298 0.96631017 1.403326492 1.697382501 2.026732089 1.736223483 1.745093477 1.552015832 1 13.7346262 -6.03452904 3.504336206 1.686304202 1.129039208 0.400607644 0.284396003 0.215535794 5.480833518 0.081763058 0.115754665 9.24E-07 6.03452904 -0.557264994 TS(ph)SIADEGTYTLDSILR ddPTM_A459_MK2206_30min_R1 2 TSSIADEGTYTLDSILR 17 0 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3;E7ERV5 A0A087WY00 MYO5A Unconventional myosin-Va 1 T(0.001)S(0.499)S(0.499)IADEGTYTLDSILR;T(0.007)S(0.497)S(0.497)IADEGTYTLDSILR 252.01 1.10E-30 99151900 7209.4 7580.2 8154 5727.6 6790 5857.6 7124.4 6448 7219.2 6853 TRUE FALSE 6596.202672 7086.727602 7600.529198 6168.740744 6519.539922 6189.25225 6649.144275 6391.625816 7969.661674 7702.001378 0.856427096 0.920115079 0.986825219 0.800926985 0.846473482 0.803590125 0.863300842 0.829865577 1.034752045 1 12.91101767 -8.265458199 24.97247176 1.017376045 0.864793497 0.57503276 0.052923215 277.5116037 1724387.507 0.04848889 0.014331094 5.43E-09 8.265458199 -0.152582548 TS(ph)SLTQFPPSQSEER ddPTM_A459_MK2206_30min_R1 3 TSSLTQFPPSQSEER 15 0 Q9H6Z4;Q9H6Z4-3;Q9H6Z4-2;B7Z7F3 Q9H6Z4 RANBP3 Ran-binding protein 3 1 T(0.018)S(0.676)S(0.305)LT(0.001)QFPPSQSEER;T(0.112)S(0.725)S(0.163)LTQFPPSQSEER;T(0.03)S(0.816)S(0.065)LT(0.088)QFPPSQSEER 206.49 2.04E-06 17003300 4764.5 3465.91 4159.48 3523.1 5024.29 5253.8 5929.5 5915.6 5178.4 4726.41 TRUE FALSE 4359.254256 3240.278629 3877.146087 3794.449772 4824.16189 5551.265616 5533.953874 5863.880533 5716.713211 5311.953353 0.82064995 0.609997568 0.729890838 0.714322871 0.908170981 1.04505165 1.041792634 1.103902866 1.076197931 1 12.37502676 -6.480520381 2.069448654 1.063333049 0.706306642 0.892789627 0.054534063 0.089727425 0.767174613 0.018907496 0.021027164 3.31E-07 6.480520381 -0.357026407 TS(ph)SLTQFPPSQSEER ddPTM_A459_MK2206_30min_R2 1 TSSLTQFPPSQSEER 15 0 Q9H6Z4;Q9H6Z4-3;Q9H6Z4-2;B7Z7F3 Q9H6Z4 RANBP3 Ran-binding protein 3 1 T(0.155)S(0.54)S(0.089)LT(0.216)QFPPSQSEER 104.09 0.0052292 4517000 8767.9 7828.7 10030 9576.8 9777.3 9846.9 11767 10044 7774.3 13823 TRUE FALSE 9439.177165 7439.938142 10364.39519 8794.344805 9393.394075 10221.63068 10221.97877 11356.78529 8450.494561 13371.95664 0.705893492 0.556383657 0.775084415 0.657670754 0.702469678 0.764408003 0.764434035 0.849298692 0.631956473 1 13.70692296 -14.52287875 0.127803176 1.931411239 0.594009904 0.568298572 0.076820965 101.6538699 0.821623485 24.36980172 0.586303366 3.00E-15 14.52287875 -1.337401335 TS(ph)STCS(ph)NESLSVGGTSVTPR ddPTM_A459_MK2206_30min_R2 1 TSSTCSNESLSVGGTSVTPR 20 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 2 T(0.332)S(0.484)S(0.17)T(0.017)CS(0.996)NES(0.001)LSVGGTSVTPR 164.56 2.51E-06 4153500 13858 16642 14344 17365 15161 13811 16303 13328 11145 14636 TRUE FALSE 14918.97913 15815.58248 14822.2218 15946.22395 14565.70296 14336.58728 14162.39652 15070.01536 12114.37195 14158.42852 1.053717163 1.117043637 1.04688326 1.126270753 1.028765512 1.01258323 1.000280257 1.064384747 0.855629701 1 13.78937353 -7.106494466 0.7681355 0.960463255 1.087691704 0.444006627 0.053440015 0.619224711 0.744186028 0.040308735 0.028269442 7.83E-08 7.106494466 0.127228449 TS(ph)STLDSEGTFNSYR ddPTM_A459_MK2206_30min_R2 1 TSSTLDSEGTFNSYR 15 0 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 T(0.001)S(0.482)S(0.482)T(0.036)LDSEGTFNSYR 288.06 4.46E-67 7519100 14680 14730 20052 30679 36803 38595 44385 29510 26991 31412 TRUE FALSE 15803.91209 13998.52962 20720.52367 28172.42756 35357.9293 40063.75977 38557.19618 33367.05832 29338.62839 30387.02901 0.520087439 0.460674507 0.681887119 0.927120172 1.163586255 1.318449387 1.26887022 1.098069124 0.965498416 1 14.89116801 -5.791987411 1.851700318 1.156097842 0.490507868 0.861445322 0.105510585 0.121543809 0.850665595 0.035742346 0.070683629 1.61E-06 5.791987411 -0.665589974 TS(ph)STNEDEDLNPEQK ddPTM_A459_MK2206_30min_R2 1 TSSTNEDEDLNPEQK 15 0 Q99081;Q99081-3;B4DGI9;Q99081-4;Q99081-2;B4DZP2;F5GY10 Q99081 TCF12 Transcription factor 12 1 T(0.006)S(0.478)S(0.478)T(0.038)NEDEDLNPEQK 289.87 3.54E-67 53292000 251260 250100 242840 203870 174840 142350 241880 205310 157560 242580 TRUE FALSE 270496.6588 237680.3977 250936.1644 187213.1689 167974.9031 147767.229 210120.8655 232144.7219 171264.284 234664.6345 1.152694608 1.012851375 1.069339506 0.797790299 0.715808343 0.629695349 0.895409169 0.989261643 0.729825712 1 17.84024091 -5.759080513 24.57789893 0.812647732 1.071750871 0.506393243 0.115368685 42.0161429 437766.1492 0.033175282 0.05412105 1.74E-06 5.759080513 0.259103139 TS(ph)SVVTLEVAK ddPTM_A459_MK2206_30min_R2 1 TSSVVTLEVAK 11 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 T(0.127)S(0.48)S(0.31)VVT(0.082)LEVAK 118.61 0.0052603 2798100 22988 32247 26507 27124 29719 24506 30929 20947 24245 28660 TRUE FALSE 24747.97895 30645.66087 27390.73015 24907.88243 28552.08273 25438.593 26867.98515 23684.84482 26353.78628 27724.82655 0.892628811 1.10535086 0.987949559 0.898396331 1.029838101 0.9175384 0.969094797 0.854282885 0.950548283 1 14.75889081 -6.329724163 0.905725967 0.931667311 0.998373456 0.049632921 0.068842007 1.333575436 2.357767614 0.034348489 0.051365183 4.68E-07 6.329724163 0.066706145 TS(ph)TGSASSSAAVAASSK ddPTM_A459_MK2206_30min_R2 1 TSTGSASSSAAVAASSK 17 0 Q9UDT6-2;Q9UDT6 Q9UDT6-2 CLIP2 CAP-Gly domain-containing linker protein 2 1 T(0.131)S(0.868)T(0.001)GSASSSAAVAASSK 210.39 8.88E-30 0 21438 17493 16453 20957 17753 15284 22969 15692 13760 18602 TRUE FALSE 23079.30976 16624.32306 17001.53481 19244.74606 17055.92802 15865.64333 19953.14271 17742.99828 14956.81993 17995.01826 1.282538835 0.923829185 0.944791195 1.069448543 0.947813877 0.881668643 1.108814807 0.985995014 0.831164476 1 14.13530995 -4.756353798 25 0.969347157 1.282539319 0.597849911 0.077851668 112.6181468 553552.8496 0.019302658 0.157443946 1.75E-05 4.756353798 0.313192161 TS(ph)TPVIMEGVQEETDTR ddPTM_A459_MK2206_30min_R1 1 TSTPVIMEGVQEETDTR 17 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 T(0.002)S(0.499)T(0.499)PVIMEGVQEETDTR 172.42 5.57E-07 7709400 1240.4 1443.8 1327.1 1163.6 1397.1 1192.3 1245 1213.4 1298.7 1062.3 TRUE FALSE 1134.897466 1349.808358 1237.02015 1253.220674 1341.450549 1259.806996 1161.948322 1202.791372 1433.704512 1193.905744 0.95057543 1.130582012 1.036112068 1.049681417 1.123581619 1.055198036 0.973232877 1.007442487 1.200852345 1 10.22147323 -4.736011815 24.73554687 1.061728028 0.950574832 0.210284554 0.065844452 3696.097492 3595292.148 0.016141592 1.175042336 1.84E-05 4.736011815 -0.111153196 TS(ph)VAGTVR ddPTM_A459_MK2206_30min_R1 1 TSVAGTVR 8 0 Q96EB6;B0QZ35;E9PC49 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 T(0.225)S(0.775)VAGTVR 140.11 0.0035228 7153900 6849.2 7199.1 6996.7 6107.6 6916.5 6257.5 6539.6 6113.8 5837.3 5608.8 TRUE FALSE 6266.639573 6730.437282 6521.783498 6578.00841 6641.001159 6611.794242 6103.355216 6060.347691 6444.108224 6303.660488 0.994127077 1.067703011 1.034602595 1.043522002 1.053515044 1.048881718 0.968223975 0.961401348 1.022280346 1 12.62197412 -7.255455903 24.95525931 0.984759862 1.042108956 0.536269404 0.02377127 332.0142086 1384733.84 0.008915638 0.006724459 5.55E-08 7.255455903 0.057349093 TS(ph)VSPAPDKTK ddPTM_A459_MK2206_30min_R2 1 TSVSPAPDKTK 11 1 O75362 O75362 ZNF217 Zinc finger protein 217 1 T(0.23)S(0.759)VS(0.011)PAPDKTK 108.32 0.047643 2564500 10016 15298 11786 12925 19067 10092 14644 9962.7 12951 14716 TRUE FALSE 10782.83266 14538.32357 12178.93936 11868.98615 18318.33378 10476.05813 12721.22521 11264.8591 14077.45457 14235.81813 0.757443834 1.0212496 0.855513835 0.833741064 1.286777733 0.73589435 0.893606893 0.791303949 0.988875697 1 13.79723779 TSADAQEPASPVVSPQQS(ph)PPT(ph)SPHTWR ddPTM_A459_MK2206_30min_R2 1 TSADAQEPASPVVSPQQSPPTSPHTWR 27 0 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;F2Z3L2;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 2 TSADAQEPASPVVS(0.001)PQQS(0.975)PPT(0.498)S(0.432)PHT(0.095)WR 86.095 0.0012334 0 6228.8 7170 7419.4 7003.5 7399.3 6627.8 6820.4 6703 8125.6 7813.3 TRUE FALSE 6705.681717 6813.948226 7666.759093 6431.291647 7108.766304 6880.025573 5924.873287 7579.105115 8832.35 7558.352661 0.887188256 0.901512344 1.0143426 0.850885363 0.940517944 0.910254639 0.783884208 1.002745632 1.168554895 1 12.88385612 -7.996499396 24.94502573 1.084735073 0.90249637 0.558750374 0.067222803 64.47357926 459435.0116 0.035752747 0.017042129 1.01E-08 7.996499396 -0.182238703 TSAQCGDVITDS(ph)PTHKR ddPTM_A459_MK2206_30min_R1 1 TSAQCGDVITDSPTHKR 17 1 Q14CZ0 Q14CZ0 C16orf72 UPF0472 protein C16orf72 1 TSAQCGDVIT(0.086)DS(0.79)PT(0.124)HKR 63.674 0.02461 4478000 929.89 1169.7 1092 826.59 875.35 854.64 969.68 998.84 906.08 702.6 TRUE FALSE 850.7979725 1093.552317 1017.878082 890.254105 840.4829559 903.0289782 904.9944165 990.1072472 1000.270258 789.6433924 1.07744582 1.384868572 1.289035142 1.127412847 1.064382941 1.143590875 1.146079895 1.253866311 1.266736692 1 9.62505746 -11.29394807 2.712005598 0.953083353 1.196161585 0.266446792 0.096955555 24974193.07 19035957.88 7791272.241 0.025511404 5.08E-12 11.29394807 0.243078232 TSAQCGDVITDS(ph)PTHKR ddPTM_A459_MK2206_30min_R2 1 TSAQCGDVITDSPTHKR 17 1 Q14CZ0 Q14CZ0 C16orf72 UPF0472 protein C16orf72 1 TSAQCGDVIT(0.06)DS(0.856)PT(0.083)HKR 76.156 0.010938 9620800 11122 12654 11925 15765 17296 10908 11756 10999 14628 13513 TRUE FALSE 11973.50887 12025.62076 12322.57355 14476.94907 16616.87213 11323.11158 10212.42308 12436.60707 15900.317 13072.07192 0.915961062 0.919947567 0.942664149 1.107471651 1.271173555 0.866206341 0.781239817 0.951387595 1.216357828 1 13.67420021 -5.546196274 23.78183592 1.019294413 0.921292152 0.099336343 0.13970401 359.9484136 367113.3235 0.041724524 0.072276267 2.84E-06 5.546196274 -0.098002262 TSAQT(ph)TPSKIPR ddPTM_A459_MK2206_30min_R2 1 TSAQTTPSKIPR 12 1 O95684 O95684 FGFR1OP FGFR1 oncogene partner 1 TSAQT(0.659)T(0.326)PS(0.015)KIPR 119.25 0.044789 7500700 25982 29370 31411 30092 34219 24163 34823 26130 27923 35220 TRUE FALSE 27971.2019 27911.52851 32458.22706 27633.38734 32875.39012 25082.5399 30250.69827 29545.28072 30351.69207 34070.77428 0.820973473 0.819222019 0.952670661 0.81105839 0.964914676 0.736189313 0.887878215 0.867173739 0.890842451 1 15.05624711 -8.881151439 1.2860014 0.999929766 0.857066101 0.309679735 0.06414684 1.576099971 4.091266528 0.058263638 0.017468385 1.31E-09 8.881151439 -0.142863665 TSASCSPAPES(ph)PMSSSESVK ddPTM_A459_MK2206_30min_R2 1 TSASCSPAPESPMSSSESVK 20 0 A0A2R8YDI1;A0A2R8Y852;P39880-6;P39880-4;P39880-5;P39880-2;P39880;P39880-3 A0A2R8YDI1 CUX1 Homeobox protein cut-like 1 1 TSAS(0.002)CS(0.004)PAPES(0.982)PMS(0.003)S(0.004)S(0.004)ES(0.001)VK 118.96 0.0002565 6224500 24245 30032 30848 28616 30787 31673 36061 26378 24359 31764 TRUE FALSE 26101.21584 28540.65455 31876.45692 26277.98126 29578.14769 32878.33821 31326.14738 29825.69517 26477.70179 30727.54328 0.849440373 0.928829692 1.037390351 0.855193044 0.962593964 1.069995668 1.019481027 0.970650172 0.861692767 1 14.90724481 -6.516119248 24.95668272 0.988232205 0.924785462 0.169369362 0.068802467 616.0784601 2274626.498 0.023134868 0.024001062 3.05E-07 6.516119248 -0.063446743 TSASEGNPYVSSTLSVPAS(ph)PR ddPTM_A459_MK2206_30min_R1 6 TSASEGNPYVSSTLSVPASPR 21 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVS(0.039)S(0.103)T(0.103)LS(0.278)VPAS(0.477)PR;TSASEGNPYVSSTLSVPAS(1)PR 345.84 1.41E-175 312102000 14942.01 14851.84 14329.36 12464.83 14077.31 12430.07 13910.64 13559.09 12575.37 11705.85 TRUE FALSE 13671.11359 13884.98252 13356.72297 13424.87337 13516.58093 13133.84982 12982.68659 13440.54431 13882.62471 13156.05907 1.039149605 1.055405911 1.015252584 1.020432737 1.027403484 0.998311861 0.986821853 1.021623894 1.055226693 1 13.68343977 -5.270894736 23.6089933 1.015350467 1.047277758 0.328572125 0.018090192 330.5118442 825258.8295 0.004975337 0.010616009 5.36E-06 5.270894736 0.031927291 TSASEGNPYVSSTLSVPAS(ph)PR ddPTM_A459_MK2206_30min_R2 4 TSASEGNPYVSSTLSVPASPR 21 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR 375.08 2.58E-242 334939000 353408 373240 393907 489655 412744 368012 404325 346427 366524 409781 TRUE FALSE 380465.1882 354705.4443 407039.6628 449648.6202 396537.5967 382016.9545 351236.6418 391706.1984 398403.595 396409.8795 0.95977726 0.894794662 1.026815132 1.134302255 1.000322185 0.963691811 0.886044117 0.988134299 1.005029429 1 18.59663339 -6.744501083 6.439948621 0.962577614 1.005982968 0.063617563 0.064130947 0.461797013 72.47175357 0.024244363 0.023335276 1.80E-07 6.744501083 0.043405354 TSAVS(ph)SPLLDQQR ddPTM_A459_MK2206_30min_R1 2 TSAVSSPLLDQQR 13 0 Q5T200;A0A087WX14;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 TSAVS(0.5)S(0.5)PLLDQQR;T(0.198)S(0.027)AVS(0.388)S(0.388)PLLDQQR 250.81 6.07E-23 205908000 11705.7 12038.5 11336 10122 11726.2 9793.5 11792.6 10995.6 10853.5 10137.7 TRUE FALSE 10710.06875 11254.79146 10566.5439 10901.59819 11259.12062 10347.99951 11005.93717 10899.46663 11981.76016 11393.63481 0.940004566 0.987813955 0.927407634 0.956814781 0.988193918 0.908226363 0.965972436 0.956627697 1.051618765 1 13.47594045 -8.246280495 23.85741483 1.025809373 0.954253764 0.548882043 0.026081156 267.671706 421271.2524 0.016805282 0.00629156 5.67E-09 8.246280495 -0.071555609 TSAVS(ph)SPLLDQQR ddPTM_A459_MK2206_30min_R2 1 TSAVSSPLLDQQR 13 0 Q5T200;A0A087WX14;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.006)SAVS(0.497)S(0.497)PLLDQQR 186.69 0.00013517 81630000 46112 49651 43047 54739 44102 48647 58360 43451 41648 48914 TRUE FALSE 49642.37017 47185.40354 44482.1655 50266.6486 42370.33389 50498.29567 50697.2619 49130.19489 45270.46776 47317.94019 1.049123651 0.997199019 0.940069777 1.062316923 0.895439102 1.067212467 1.071417346 1.038299526 0.956729468 1 15.53009965 TSAVSS(ph)PLLDQQR ddPTM_A459_MK2206_30min_R1 2 TSAVSSPLLDQQR 13 0 Q5T200;A0A087WX14;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 TSAVS(0.338)S(0.662)PLLDQQR;T(0.012)SAVS(0.024)S(0.964)PLLDQQR 179.46 0.00010955 39012000 6913.1 7539.4 6657 6350.8 7193.9 6022.2 6990.5 7130.1 7051.5 6860 TRUE FALSE 6325.104543 7048.58369 6205.141387 6839.939716 6907.35173 6363.17176 6524.1765 7067.762287 7784.528659 7709.86859 0.820390707 0.914228771 0.804831018 0.887166835 0.895910436 0.825328173 0.846211115 0.91671631 1.009683702 1 12.91249056 -8.078522526 2.874536998 1.005690193 0.858303774 0.756393676 0.033447964 0.129639814 1.971045773 0.026119992 0.008689982 8.35E-09 8.078522526 -0.147386418 TSAVSS(ph)PLLDQQR ddPTM_A459_MK2206_30min_R2 4 TSAVSSPLLDQQR 13 0 Q5T200;A0A087WX14;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.001)S(0.003)AVS(0.224)S(0.773)PLLDQQR;TSAVS(0.023)S(0.977)PLLDQQR;TSAVS(0.074)S(0.926)PLLDQQR;TSAVS(0.074)S(0.926)PLLDQQR 233.52 1.93E-13 292010300 541799.4 595314.7 523365.6 616987.3 592555.6 519976.5 601871.3 518444.9 483774.1 578880.9 TRUE FALSE 583279.9786 565752.2377 540814.3479 566577.4639 569288.8898 539764.5701 522844.8753 586207.4285 525851.8968 559992.0636 1.041586152 1.010286171 0.965753594 1.01175981 1.016601711 0.963878964 0.933664795 1.046813815 0.939034552 1 19.09504686 -6.757468363 24.99973087 0.976915936 1.006986773 0.180165897 0.034521905 202.2361905 1273187.762 0.011507696 0.011096599 1.75E-07 6.757468363 0.030070837 TSCSGSGERES(ph)PER ddPTM_A459_MK2206_30min_R1 1 TSCSGSGERESPER 14 1 Q9H8Y5;C9JQZ3;C9K022 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 TSCSGSGERES(1)PER 186.29 0.00039351 2626900 820.23 951.64 845.44 734.66 999.19 681.16 862.89 857.21 650.78 908.25 TRUE FALSE 750.4651313 889.688063 788.0538883 791.2436405 959.3901465 719.7266906 805.3281825 849.7155033 718.4309098 1020.770867 0.735194504 0.871584497 0.772018397 0.775143243 0.939868268 0.705081536 0.78894119 0.832425308 0.703812122 1 9.995443345 -11.33003942 6.084488374 1.013700069 0.795802048 0.441571753 0.070174404 0.012754914 0.000404249 0.066452995 0.015659041 4.68E-12 11.33003942 -0.217898021 TSCSGSGERES(ph)PERK ddPTM_A459_MK2206_30min_R1 1 TSCSGSGERESPERK 15 2 Q9H8Y5;C9JQZ3;C9K022 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 TSCSGS(0.001)GERES(0.999)PERK 55.899 0.039393 2908700 1649.8 1856 1340.1 1573.3 1048.9 1269.6 1432.2 1874.5 401.99 1208 TRUE FALSE 1509.475847 1735.174063 1249.137746 1694.475839 1007.120092 1341.483655 1336.660551 1858.111444 443.778299 1357.65616 1.111824843 1.278065915 0.920069295 1.248089088 0.74180792 0.988087923 0.984535401 1.368617106 0.326870906 1 10.40690243 -5.295271128 0.46692437 0.906095238 1.310019983 0.120850597 0.267460489 7.415108975 1.777315875 0.192949658 1.572405794 5.07E-06 5.295271128 0.403924745 TSDDEVGS(ph)PKEESR ddPTM_A459_MK2206_30min_R1 3 TSDDEVGSPKEESR 14 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9 Q6ULP2-7 AFTPH Aftiphilin 1 TSDDEVGS(1)PKEESR;TSDDEVGS(0.999)PKEES(0.001)R;TSDDEVGS(1)PKEESR 197.7 0.00048448 33280900 9231.8 13024.3 13182.5 11258.8 7843.7 6922.7 9044 9633.7 10736.2 9474.2 TRUE FALSE 8446.586932 12176.4157 12287.70863 12125.95473 7531.26882 7314.657292 8440.691262 9549.473577 11852.26641 10647.93542 0.793260533 1.143547103 1.153999169 1.138808064 0.707298506 0.686955452 0.792706842 0.896838044 1.113104648 1 13.37828611 -6.249619918 24.97794209 0.848360538 1.070456496 0.263373185 0.154373784 962.8705034 2034823.266 0.047973347 0.06140761 5.63E-07 6.249619918 0.222095959 TSDDEVGS(ph)PKEESR ddPTM_A459_MK2206_30min_R2 3 TSDDEVGSPKEESR 14 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9 Q6ULP2-7 AFTPH Aftiphilin 1 TSDDEVGS(1)PKEESR;TSDDEVGS(0.994)PKEES(0.006)R;T(0.001)S(0.007)DDEVGS(0.992)PKEESR 112.96 0.0078992 57252000 93630 109994 108283 91952 92317 81586 104322 76372 81440 99802 TRUE FALSE 100798.3848 104531.8579 111893.1012 84439.22746 88692.17072 84690.8124 90624.39609 86354.08262 88523.50399 96545.46891 1.044050911 1.082721531 1.158967919 0.874605804 0.918656999 0.877211674 0.93867063 0.894439517 0.91690998 1 16.55892093 -5.766728268 24.99998318 0.912102597 1.09399427 0.784095794 0.04275077 51.17146419 241883.0771 0.011425699 0.017524703 1.71E-06 5.766728268 0.181891674 TSDIFGS(ph)PVTATSR ddPTM_A459_MK2206_30min_R1 5 TSDIFGSPVTATSR 14 0 A6NGP5;Q9H910;Q9H910-3;H3BMV3;H3BTV5;Q9H910-2;H3BU16;H3BMT0 A6NGP5;Q9H910-2 HN1L Hematological and neurological expressed 1-like protein 1 T(0.008)S(0.001)DIFGS(0.99)PVT(0.001)ATSR;T(0.003)S(0.095)DIFGS(0.895)PVT(0.007)ATSR;T(0.133)S(0.133)DIFGS(0.725)PVT(0.008)ATSR;TSDIFGS(0.992)PVT(0.008)ATSR;TSDIFGS(0.974)PVT(0.026)ATSR 201.3 6.02E-05 379997000 16813.6 15321.5 14988.8 13003.9 15708.9 15353.4 18707.7 19021.6 17101.7 17367.1 TRUE FALSE 15383.51503 14324.06757 13971.40202 14005.46263 15083.18125 16222.69624 17459.74347 18855.29616 18879.48291 19518.66746 0.788143712 0.733865034 0.715796918 0.717541946 0.77275671 0.831137488 0.894515135 0.966013494 0.967252654 1 14.25256694 -7.253446684 1.129631359 0.987814153 0.735420621 0.958112389 0.021426734 0.095540222 0.237651027 0.015491995 0.008870935 5.58E-08 7.253446684 -0.252393532 TSDIFGS(ph)PVTATSR ddPTM_A459_MK2206_30min_R2 4 TSDIFGSPVTATSR 14 0 A6NGP5;Q9H910;Q9H910-3;H3BMV3;H3BTV5;Q9H910-2;H3BU16;H3BMT0 A6NGP5;Q9H910-2 HN1L Hematological and neurological expressed 1-like protein 1 TSDIFGS(0.999)PVTATSR;T(0.003)S(0.027)DIFGS(0.746)PVT(0.223)AT(0.001)SR;TSDIFGS(1)PVTATSR;TSDIFGS(1)PVTATSR 244 5.88E-20 531007000 650407 771866 652423 816435 818872 770607 1028420 729915 784274 983675 TRUE FALSE 700202.66 733536.2568 674174.4572 749729.6489 786718.9708 799932.9894 893387.2186 825317.3967 852488.7349 951577.7653 0.735833355 0.770863174 0.708480675 0.787880588 0.826752158 0.840638588 0.938848354 0.867314713 0.895868699 1 19.85996204 -6.883268699 0.32426305 0.995632294 0.680924799 0.863172265 0.032030838 0.730080428 0.168586174 0.043808968 0.083328069 1.31E-07 6.883268699 -0.314707495 TSDISEPS(ph)PESSILSSR ddPTM_A459_MK2206_30min_R1 1 TSDISEPSPESSILSSR 17 0 Q96JQ2 Q96JQ2 CLMN Calmin 1 TSDISEPS(0.997)PES(0.002)S(0.001)ILSSR 139.29 0.00036923 0 883.05 702.23 721.64 476.9 772.91 764.97 677.85 567 653.48 499.67 TRUE FALSE 807.9419604 656.5146994 672.6570874 513.6309206 742.123358 808.2819403 632.6318633 562.0427788 721.4115845 561.5728919 1.438712538 1.169064086 1.197809042 0.914629121 1.321508514 1.439317944 1.126535615 1.000836734 1.284626795 1 9.133329486 -14.52287874 0.12611522 0.342724383 1.289041207 0.148149016 0.160525708 333.582064 2.673013578 55.70932531 1.404593881 3.00E-15 14.52287874 0.946316824 TSDLRDEAS(ph)SVTR ddPTM_A459_MK2206_30min_R2 2 TSDLRDEASSVTR 13 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 TSDLRDEAS(0.735)S(0.26)VT(0.005)R;TSDLRDEAS(0.497)S(0.497)VT(0.006)R 70.167 0.033927 39226000 195601 168903 168189 159440 164237 154337 185354 135176 128621 167055 TRUE FALSE 210576.363 160515.5226 173796.3373 146413.242 157788.2302 160210.4027 161016.7971 152843.9673 139808.2221 161604.009 1.303039227 0.993264484 1.075445704 0.906000061 0.976388093 0.991376412 0.996366353 0.945793166 0.865128427 1 17.30210346 -2.08919075 1.139070957 0.961645105 199.9999999 0.770351752 0.054196204 412.894697 1.224340289 0.016123934 213888.6374 0.008143465 2.08919075 199.0383548 TSDLRDEASS(ph)VTR ddPTM_A459_MK2206_30min_R1 1 TSDLRDEASSVTR 13 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 TSDLRDEAS(0.066)S(0.934)VTR 143.56 0.003398 19197000 4958.3 5652.2 5329.4 4056.5 5201.4 4874.3 6293.2 4813 5648.3 5866.7 TRUE FALSE 4536.570548 5284.240753 4967.655177 4368.932333 4994.217224 5150.278654 5873.392111 4770.920448 6235.460998 6593.511087 0.688035629 0.80143048 0.753415761 0.662610903 0.757444275 0.781113217 0.890783686 0.723578134 0.945696597 1 12.6868312 -8.352012331 0.538841312 1.007669935 0.729546021 0.655116437 0.061889067 0.560544336 0.403661624 0.065891184 0.032626713 4.45E-09 8.352012331 -0.278123914 TSDPDVILCNS(ph)VELIR ddPTM_A459_MK2206_30min_R1 2 TSDPDVILCNSVELIR 16 0 Q96CW6;A0A087X0P9 Q96CW6 SLC7A6OS Probable RNA polymerase II nuclear localization protein SLC7A6OS 1 T(0.016)S(0.054)DPDVILCNS(0.93)VELIR;TSDPDVILCNS(1)VELIR 194.1 1.19E-06 21107000 4136.5 3889.4 3822.56 3811 3837 3533.5 3698.24 3926.71 3264.1 3494.57 TRUE FALSE 3784.668953 3636.199353 3563.095277 4104.52388 3684.164165 3733.563716 3451.537157 3892.379188 3603.414876 3927.503714 0.963632177 0.925829641 0.907216272 1.045071928 0.938042185 0.950620035 0.87881194 0.991056781 0.917482232 1 11.93939692 -11.14353956 2.955379421 1.004023194 0.946762893 0.117073251 0.044134954 38913231 35620336.39 1190517.068 0.010800459 7.19E-12 11.14353956 -0.057260301 TSDPDVILCNS(ph)VELIR ddPTM_A459_MK2206_30min_R2 1 TSDPDVILCNSVELIR 16 0 Q96CW6;A0A087X0P9 Q96CW6 SLC7A6OS Probable RNA polymerase II nuclear localization protein SLC7A6OS 1 TSDPDVILCNS(1)VELIR 115.98 0.0021131 0 5539.2 5219.1 4792.1 5345.8 4771.4 5672.3 5626.2 4199.4 5406.7 5595.2 TRUE FALSE 5963.285411 4959.927083 4951.866222 4909.03104 4584.050862 5888.163351 4887.473182 4748.275999 5876.964993 5412.629082 1.101735464 0.916361902 0.914872633 0.906958701 0.846917605 1.08785643 0.90297582 0.877258709 1.085787499 1 12.40211381 -8.268825875 24.92599383 1.04289375 0.941358496 0.185516569 0.082385036 990.568924 3342662.281 0.072474719 0.020233685 5.38E-09 8.268825875 -0.101535254 TSDPTQDLHFTPLLS(ph)PSSSTSASSTAK ddPTM_A459_MK2206_30min_R2 1 TSDPTQDLHFTPLLSPSSSTSASSTAK 27 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 TSDPTQDLHFTPLLS(0.991)PS(0.008)S(0.001)STSASSTAK 119.54 1.32E-08 0 14560 24688 15872 24688 22499 18341 23850 12187 17296 15103 TRUE FALSE 15674.72479 23462.02982 16401.16456 22670.91143 21615.57621 19038.97961 20718.46635 13779.88274 18800.37482 14610.19035 1.072862463 1.605867498 1.122583907 1.551719101 1.479486283 1.303130155 1.41808326 0.943169282 1.28679876 1 13.83468735 -7.748974811 24.98904806 1.086238004 1.373999454 0.347738812 0.180406211 226.4023271 453894.9244 0.07957656 0.045531717 1.78E-08 7.748974811 0.28776145 TSDS(ph)DQQAYLVQR ddPTM_A459_MK2206_30min_R2 1 TSDSDQQAYLVQR 13 0 Q96CV9-3;Q96CV9-2;Q96CV9 Q96CV9-3 OPTN Optineurin 1 T(0.025)S(0.087)DS(0.888)DQQAYLVQR 122.1 0.0027135 77141000 24558 37742 34910 33779 33365 28699 27539 16913 21597 21811 TRUE FALSE 26438.17936 35867.78716 36073.88198 31019.14765 32054.92245 29791.16056 23923.09622 19123.58717 23475.46802 21099.30886 1.253035327 1.699950809 1.709718656 1.47014994 1.519240401 1.411949593 1.133833169 0.906360834 1.112617867 1 14.36490812 -7.231346347 2.010457952 1.002083158 1.548103143 0.769183086 0.129142825 0.154587 1.221407402 0.064651459 0.042195236 5.87E-08 7.231346347 0.546019986 TSDS(ph)TPDPQR ddPTM_A459_MK2206_30min_R2 1 TSDSTPDPQR 10 0 P52948-6;P52948-2;P52948-5;P52948;H7C3P6 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 T(0.282)S(0.119)DS(0.3)T(0.3)PDPQR 95.094 0.023134 11235000 24511 19381 21939 22775 21706 19935 29144 20112 20389 19622 TRUE FALSE 26387.58101 18418.56772 22670.43531 20914.20965 20853.71338 20693.64039 25317.35779 22740.70745 22162.39837 18981.73575 1.390156378 0.970331058 1.194328886 1.101807017 1.098619939 1.090186939 1.333774642 1.198030979 1.167564371 1 14.2123243 TSDS(ph)TPDPQRVPLR ddPTM_A459_MK2206_30min_R2 2 TSDSTPDPQRVPLR 14 1 P52948-6;P52948-2;P52948-5;P52948;H7C3P6 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 T(0.013)S(0.009)DS(0.489)T(0.489)PDPQRVPLR;T(0.055)S(0.055)DS(0.48)T(0.41)PDPQRVPLR 71.08 0.030671 26425000 78308 122454 101116 138195 159236 130972 137834 97272 115511 109358 TRUE FALSE 84303.32069 116373.1124 104487.157 126904.0264 152983.5945 135956.2312 119736.2302 109985.7844 125557.938 105789.6574 0.796895677 1.100042436 0.987687828 1.199588216 1.446111069 1.285156173 1.131833046 1.039664813 1.186864019 1 16.69083906 -4.284375125 1.030226088 1.186586598 0.149688409 0.417730869 0.129419311 4.68409943 1.992885749 0.044549899 6.840103479 5.20E-05 4.284375125 -1.036898188 TSDST(ph)PDPQR ddPTM_A459_MK2206_30min_R1 2 TSDSTPDPQR 10 0 P52948-6;P52948-2;P52948-5;P52948;H7C3P6 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 TSDS(0.136)T(0.864)PDPQR;TSDS(0.11)T(0.89)PDPQR 194.39 0.00039912 6460100 5414.2 5283.7 5416.8 4181.2 4805 4214.5 5163.8 4284 3695.4 5670.2 TRUE FALSE 4953.693859 4939.73017 5049.122708 4503.236748 4613.606675 4453.121348 4819.332324 4246.54544 4079.550054 6372.667184 0.777334469 0.775143284 0.79230918 0.706648664 0.723967931 0.698784546 0.756250434 0.66636862 0.640163677 1 12.6376816 -10.52434964 4.450165594 1.000009312 0.727364267 0.750428953 0.047343417 72544543.86 154521410.2 10738.04553 0.012839248 2.99E-11 10.52434964 -0.272645046 TSDVNETQPPQS(ph)E ddPTM_A459_MK2206_30min_R1 1 TSDVNETQPPQSE 13 0 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 1 TSDVNETQPPQS(1)E 104.41 0.0076976 5139800 2364.1 2499.3 2237.2 1571.5 2396.2 2768.5 2632 2325.9 2203.8 2001.3 TRUE FALSE 2163.020881 2336.595116 2085.345097 1692.537202 2300.75428 2925.250078 2456.424082 2305.564902 2432.892896 2249.236153 0.961669088 1.038839391 0.927134794 0.752494219 1.022904721 1.300552667 1.092114796 1.025043501 1.081652939 1 11.13521943 -6.520181738 24.9993682 1.107705969 0.923861591 0.415568508 0.100285664 111.1437191 1030238.376 0.03437841 0.034980717 3.02E-07 6.520181738 -0.183844378 TSDVNETQPPQS(ph)E ddPTM_A459_MK2206_30min_R2 2 TSDVNETQPPQSE 13 0 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 1 TSDVNETQPPQS(1)E;TSDVNETQPPQS(1)E 102.73 0.0090633 14551300 18314.6 22854.5 18443.5 23445 17704.5 19509.4 23844 20551.8 21486 23052 TRUE FALSE 19716.77986 21719.57876 19058.39708 21529.4685 17009.33237 20251.84389 20713.25416 23237.99082 23354.81344 22299.81513 0.884167862 0.973980216 0.854643726 0.965455022 0.762756654 0.908161963 0.928853178 1.042071008 1.047309734 1 14.44474413 -7.649011107 3.324376662 1.034690745 0.892389759 0.541739523 0.056712944 0.185837187 4.020504329 0.030291897 0.015796322 2.24E-08 7.649011107 -0.142300987 TSEIEPKNS(ph)PEDLGLSLTGDSCK ddPTM_A459_MK2206_30min_R1 2 TSEIEPKNSPEDLGLSLTGDSCK 23 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 TSEIEPKNS(1)PEDLGLSLTGDSCK;T(0.001)S(0.001)EIEPKNS(0.96)PEDLGLS(0.026)LT(0.011)GDSCK 107.06 1.08E-05 17541300 3394.6 3909.5 4423.4 5181.9 3408 2346.43 2216.4 4090.9 2204 1465.3 TRUE FALSE 3105.871444 3654.990839 4123.151932 5581.010836 3272.252143 2479.282839 2068.548 4055.133693 2433.113687 1646.832426 1.885966899 2.21940665 2.50368639 3.388936692 1.986997639 1.505485804 1.256076797 2.462383924 1.477450679 1 10.68547805 -6.51570939 22.39906702 1.628618099 2.505813583 0.443860219 0.501325855 88.23224491 275665.7778 0.166210263 0.17327174 3.05E-07 6.51570939 0.877195483 TSES(ph)PSKPGEK ddPTM_A459_MK2206_30min_R1 3 TSESPSKPGEK 11 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;H0YA91;H0Y944;P20810-5;F8W7E0;E9PSG1;D6RGF7;D6RBR1;E7EN75 P20810-6;P20810-5 CAST Calpastatin 1 TSES(0.935)PS(0.065)KPGEK;TSES(0.954)PS(0.046)KPGEK;T(0.008)S(0.001)ES(0.983)PS(0.008)KPGEK 174.46 0.00061989 114679300 16138.5 15921 11950.9 12101.3 4957 5428 10864.6 14048.9 951.73 8410.4 TRUE FALSE 14765.83583 14884.54001 11139.70621 13033.34422 4759.552193 5735.328669 10139.84236 13926.07195 1050.665739 9452.343847 1.56213486 1.574693033 1.178512587 1.378847874 0.503531428 0.606762594 1.072733125 1.473292992 0.111153991 1 13.2064564 -6.171625199 7.364805188 0.823485698 1.421594998 0.425572211 0.3571685 0.298396998 21.47143346 0.107070903 0.138609381 6.74E-07 6.171625199 0.5981093 TSETDDGVVGKS(ph)SDGEDEQQVPK ddPTM_A459_MK2206_30min_R2 1 TSETDDGVVGKSSDGEDEQQVPK 23 1 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 T(0.001)S(0.001)ET(0.001)DDGVVGKS(0.912)S(0.085)DGEDEQQVPK 64.761 0.0025405 8581100 43110 50931 48610 56770 55717 32534 62207 43539 39669 60341 TRUE FALSE 46410.53475 48401.8406 50230.63314 52131.7094 53529.27062 33772.10417 54039.14618 49229.69679 43119.33791 58372.07811 0.795081077 0.829195091 0.860525011 0.893093258 0.917035548 0.578566076 0.92577047 0.843377491 0.73869801 1 15.83299081 -10.6074739 4.396547276 1.000013375 0.82328203 0.236246509 0.09686521 135861966.6 122728230.4 26878.39473 0.023857016 2.47E-11 10.6074739 -0.176731345 TSETDDGVVGKSS(ph)DGEDEQQVPK ddPTM_A459_MK2206_30min_R2 1 TSETDDGVVGKSSDGEDEQQVPK 23 1 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 TSETDDGVVGKS(0.413)S(0.587)DGEDEQQVPK 64.377 0.002622 9323300 20262 27380 27483 26786 32101 19364 34519 26431 24247 37518 TRUE FALSE 21813.2743 26020.34901 28399.2695 24597.49812 30840.55345 20100.91059 29986.61384 29885.62245 26355.96023 36293.79073 0.601019454 0.716936657 0.782482869 0.677732957 0.849747376 0.55383883 0.826218844 0.823436237 0.726183727 1 15.14743513 -14.52287874 0.15476844 1.986531069 0.654350527 0.489680399 0.088053457 114.7852498 1.035134634 34.66111079 0.39713778 3.00E-15 14.52287874 -1.332180542 TSETLS(ph)QAGQK ddPTM_A459_MK2206_30min_R1 1 TSETLSQAGQK 11 0 H0YC42;P55327-2;P55327;P55327-3;P55327-4;P55327-7;P55327-5;P55327-6 H0YC42 TPD52 Tumor protein D52 1 TSET(0.031)LS(0.969)QAGQK 110.98 0.0085117 4449100 1273.6 1086.2 1337.4 995.86 1145.8 1050.9 1184.4 1132.5 901.03 1107.1 TRUE FALSE 1165.273632 1015.488183 1246.621014 1072.56131 1100.16036 1110.40105 1105.390837 1122.598672 994.6952929 1244.255906 0.936522484 0.816140938 1.001900821 0.862010222 0.88419139 0.892421763 0.888395089 0.902224909 0.799429834 1 10.28106752 TSFMMALCLSS(ph)IY(ph)EDLK ddPTM_A459_MK2206_30min_R1 1 TSFMMALCLSSIYEDLK 17 0 E7ENE1;E9PGR3;P29459 E7ENE1 IL12A Interleukin-12 subunit alpha 2 TSFMMALCLS(0.262)S(0.739)IY(0.999)EDLK 60.968 0.043499 5838400 1076.3 925.6 1122.7 670.2 994.59 1177.8 1381.8 867.68 1001.5 1396.5 TRUE FALSE 984.7550331 865.3432718 1046.494252 721.8189201 954.9733742 1244.486018 1289.622643 860.0939652 1105.609509 1569.508963 0.627428741 0.551346499 0.666765388 0.459901114 0.608453597 0.792914247 0.821672685 0.548001946 0.704430198 1 10.61609755 -6.666458023 5.705090539 0.747659522 0.575998114 0.389176029 0.117560037 0.251529506 12.33205824 0.038833399 0.03861576 2.16E-07 6.666458023 -0.171661408 TSFS(ph)VGSDDELGPIR ddPTM_A459_MK2206_30min_R2 1 TSFSVGSDDELGPIR 15 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 T(0.03)SFS(0.635)VGS(0.335)DDELGPIR 236.05 1.39E-15 15452000 38954 50835 44069 51947 48135 49970 52528 33895 39728 49958 TRUE FALSE 41936.34819 48310.60782 45538.23846 47702.76393 46244.97804 51871.64337 45631.0105 38325.19288 43183.46963 48327.87455 0.867746587 0.999642717 0.942276872 0.987065216 0.956900722 1.073327636 0.94419651 0.79302459 0.893552014 1 15.56056793 -7.536098788 24.98448977 0.879695059 0.974345376 0.189492626 0.067433159 293.8073386 555257.9047 0.030319811 0.017517528 2.91E-08 7.536098788 0.094650317 TSFSQEQSCDS(ph)AGEGSER ddPTM_A459_MK2206_30min_R1 4 TSFSQEQSCDSAGEGSER 18 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 TSFSQEQS(0.018)CDS(0.982)AGEGSER;TSFSQEQSCDS(1)AGEGSER;TSFSQEQS(0.001)CDS(0.999)AGEGSER;TSFSQEQSCDS(1)AGEGSER 411.96 0 27214300 4488.29 3767.58 4412.8 3830.46 4239.82 4109.66 4090.32 4115.93 3596.5 3131.57 TRUE FALSE 4106.537367 3522.309857 4113.271431 4125.482693 4070.938991 4342.345398 3817.462216 4079.944858 3970.369045 3519.532534 1.166784886 1.000789117 1.168698227 1.172167796 1.156670368 1.233784702 1.084650356 1.159229193 1.128095566 1 11.78116811 -8.579222941 17.3158241 0.999999999 1.141637811 0.345043811 0.058659296 717.0376588 220363.2635 0.057267516 0.014786409 2.63E-09 8.579222941 0.141637812 TSFSQEQSCDS(ph)AGEGSER ddPTM_A459_MK2206_30min_R2 4 TSFSQEQSCDSAGEGSER 18 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 TSFSQEQSCDS(1)AGEGSER;TSFSQEQS(0.002)CDS(0.974)AGEGS(0.024)ER;TSFSQEQS(0.024)CDS(0.976)AGEGSER;TSFSQEQSCDS(1)AGEGSER 365.57 1.31E-206 83142000 58056 68890 67301 77179 66371.8 69897 70857 60113 63717.9 62927.8 TRUE FALSE 62500.812 65469.02278 69544.78175 70873.22882 63765.70964 72556.97931 61553.39079 67969.9755 69259.96777 60874.47104 1.026716305 1.075475838 1.14242934 1.164252068 1.047495092 1.191911454 1.011152783 1.116559608 1.13775063 1 15.89354971 -9.576868414 10.29534868 1.000000003 1.102661928 0.220845231 0.057174083 0 0 0.053694576 0.013022848 2.65E-10 9.576868414 0.102661924 TSFSVGS(ph)DDELGPIR ddPTM_A459_MK2206_30min_R1 6 TSFSVGSDDELGPIR 15 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 TSFS(0.001)VGS(0.999)DDELGPIR;TSFS(0.003)VGS(0.997)DDELGPIR;TSFS(0.249)VGS(0.751)DDELGPIR;TSFSVGS(1)DDELGPIR;TSFS(0.015)VGS(0.985)DDELGPIR;TSFS(0.002)VGS(0.998)DDELGPIR 358.73 4.34E-189 192761600 9092.99 9349.48 9424 7847.13 9682.3 8565.89 9399.34 9309.92 8694.99 8087.68 TRUE FALSE 8319.583451 8740.827153 8784.325137 8451.517312 9296.633488 9050.883289 8772.327179 9228.524351 9598.865326 9089.642857 0.915281665 0.961624927 0.966410372 0.929796412 1.022772141 0.995735854 0.965090413 1.015279092 1.056022275 1 13.1500079 -5.835853398 0.439131988 1.021824583 0.908837775 0.550402466 0.027545315 1.799733448 0.519901713 0.024533289 0.097490264 1.46E-06 5.835853398 -0.112986808 TSFSVGS(ph)DDELGPIR ddPTM_A459_MK2206_30min_R2 11 TSFSVGSDDELGPIR 15 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 TSFS(0.017)VGS(0.983)DDELGPIR;TSFS(0.001)VGS(0.999)DDELGPIR;TS(0.003)FS(0.156)VGS(0.84)DDELGPIR;TSFS(0.001)VGS(0.999)DDELGPIR;TSFS(0.001)VGS(0.999)DDELGPIR;TSFS(0.003)VGS(0.997)DDELGPIR;TSFS(0.013)VGS(0.987)DDELGPIR;TSFSVGS(0.999)DDELGPIR;TSFSVGS(1)DDELGPIR;TSFS(0.005)VGS(0.995)DDELGPIR;TSFSVGS(1)DDELGPIR 244 1.60E-20 38695300 146326.3 177410.8 164318.4 176556.4 182520.5 169541.5 178846.9 137239.1 159759.6 170905.4 TRUE FALSE 157529.154 168600.8377 169796.6934 162131.1773 175353.8281 175993.5206 155364.0872 155176.7216 173655.2012 165328.7708 0.952823597 1.019791273 1.027024471 0.980659183 1.0606371 1.064506315 0.939728073 0.938594782 1.050362864 1 17.33497828 -9.867513352 12.40732598 0.999999629 1.0039213 0.000598167 0.046227787 0 0 0.04634188 0.011239557 1.36E-10 9.867513352 0.003921671 TSFSVGS(ph)DDELGPIRK ddPTM_A459_MK2206_30min_R1 1 TSFSVGSDDELGPIRK 16 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 T(0.022)S(0.001)FS(0.007)VGS(0.97)DDELGPIRK 87.24 0.0076419 11205000 1460.4 1650.4 1428.2 1492.7 1572.9 1187.9 1516.4 1533.9 1373.8 1285.1 TRUE FALSE 1336.185311 1542.95866 1331.257763 1607.668013 1510.248062 1255.157871 1415.243723 1520.489274 1516.611426 1444.30789 0.92513883 1.068303144 0.921727128 1.113106162 1.045655205 0.869037606 0.979876751 1.052745945 1.050061027 1 10.49616261 -7.759738593 24.99061247 1.038552618 0.991783218 0.077657763 0.070607738 124.454179 1828783.32 0.035779659 0.019265196 1.74E-08 7.759738593 -0.0467694 TSGAPGS(ph)PQTPPER ddPTM_A459_MK2206_30min_R1 6 TSGAPGSPQTPPER 14 0 Q96MH2;K7ESM2;K7ELS4;K7EJA3;K7ERG7;K7EIM4 Q96MH2 HEXIM2 Protein HEXIM2 1 T(0.001)SGAPGS(0.988)PQT(0.011)PPER;TSGAPGS(0.985)PQT(0.015)PPER;TSGAPGS(0.971)PQT(0.029)PPER;TSGAPGS(0.978)PQT(0.022)PPER;TSGAPGS(0.875)PQT(0.125)PPER;TSGAPGS(0.836)PQT(0.164)PPER 173.19 0.00010872 92565600 12213.39 12836.6 12936.21 10808.62 12101.6 11529.28 12129.7 11328.79 12066.61 11160.13 TRUE FALSE 11174.57705 12000.93501 12058.13611 11641.10179 11619.56765 12182.05787 11320.54984 11229.74358 13320.97729 12542.73116 0.890920558 0.956803973 0.961364471 0.928115387 0.926398525 0.971244438 0.902558598 0.895318846 1.062047581 1 13.61456391 -8.263237238 24.99999739 1.031023796 0.931488659 0.651526653 0.029777793 100.2670654 1394197.368 0.024119426 0.007469309 5.45E-09 8.263237238 -0.099535138 TSGAPGS(ph)PQTPPER ddPTM_A459_MK2206_30min_R2 4 TSGAPGSPQTPPER 14 0 Q96MH2;K7ESM2;K7ELS4;K7EJA3;K7ERG7;K7EIM4 Q96MH2 HEXIM2 Protein HEXIM2 1 T(0.026)SGAPGS(0.852)PQT(0.122)PPER;TSGAPGS(0.8)PQT(0.2)PPER;TS(0.001)GAPGS(0.985)PQT(0.014)PPER;TSGAPGS(0.847)PQT(0.153)PPER 157.74 0.00031102 106712500 52361 63985 55889 73866 58332 67867 69146 52510 53917.9 64911 TRUE FALSE 56369.79842 60807.59794 57752.31137 67830.91151 56041.59259 70449.72624 60067.04714 59373.23729 58607.58148 62792.95939 0.897708899 0.96838242 0.919725904 1.080231163 0.892482105 1.12193671 0.956588887 0.945539721 0.933346382 1 15.93831519 TSGGDHAPDS(ph)PSGENSPAPQGR ddPTM_A459_MK2206_30min_R1 4 TSGGDHAPDSPSGENSPAPQGR 22 0 E9PL60;E9PII7;H0YDE3;H0YDU2;E9PRI1;Q96NY9 E9PL60 MUS81 Crossover junction endonuclease MUS81 1 TSGGDHAPDS(0.905)PS(0.095)GENSPAPQGR;TSGGDHAPDS(0.998)PS(0.002)GENSPAPQGR;TSGGDHAPDS(0.876)PS(0.124)GENSPAPQGR;TSGGDHAPDS(0.78)PS(0.22)GENSPAPQGR 148.58 2.15E-07 31643700 12557.5 9071.23 10302 7589.34 14130.3 13637.4 12610.3 11176.11 8451.8 7603.5 TRUE FALSE 11489.41868 8480.691278 9602.728943 8173.872282 13567.46023 14409.5378 11769.0899 11078.39845 9330.394855 8545.478983 1.344502597 0.992418482 1.123720386 0.956514234 1.587676976 1.686217687 1.377229985 1.296404622 1.091851595 1 13.06094564 -6.252086564 24.99822237 1.373899748 1.097686144 0.214724434 0.214760089 944.4068082 2524211.425 0.0658083 0.083765456 5.60E-07 6.252086564 -0.276213604 TSGGDHAPDS(ph)PSGENSPAPQGR ddPTM_A459_MK2206_30min_R2 3 TSGGDHAPDSPSGENSPAPQGR 22 0 E9PL60;E9PII7;H0YDE3;H0YDU2;E9PRI1;Q96NY9 E9PL60 MUS81 Crossover junction endonuclease MUS81 1 TSGGDHAPDS(0.988)PS(0.012)GENS(0.001)PAPQGR;TSGGDHAPDS(0.983)PS(0.017)GENSPAPQGR;TSGGDHAPDS(0.997)PS(0.003)GENSPAPQGR 230.62 1.54E-30 22449400 35083.5 47855 35241 54244 50256 48153.4 50415 34730.5 39640.4 39579.3 TRUE FALSE 37769.51973 45478.59029 36415.91735 49812.09168 48282.69692 49985.91138 43795.44994 39269.8956 43088.25034 38287.83068 0.986462776 1.187807966 0.951109444 1.300990179 1.261045509 1.305529994 1.143847775 1.025649531 1.125377165 1 15.2245983 -7.642122581 5.686091548 1.057701346 1.171611828 0.16285437 0.11615092 0.41171723 18.77558196 0.058699523 0.0331759 2.28E-08 7.642122581 0.113910482 TSGGDHAPDSPS(ph)GENSPAPQGR ddPTM_A459_MK2206_30min_R1 1 TSGGDHAPDSPSGENSPAPQGR 22 0 E9PL60;E9PII7;H0YDE3;H0YDU2;E9PRI1;Q96NY9 E9PL60 MUS81 Crossover junction endonuclease MUS81 1 TSGGDHAPDS(0.453)PS(0.538)GENS(0.009)PAPQGR 71.524 0.002297 1326800 452.43 812.71 454.29 666.17 435.39 303.85 348.13 491.76 471.52 585.37 TRUE FALSE 413.9484527 759.8024313 423.4540605 717.4785288 418.0474943 321.0537244 324.9068829 487.4605942 520.5361914 657.8900549 0.629206126 1.154907914 0.643654753 1.090575125 0.635436714 0.488005134 0.493861977 0.740945376 0.791220642 1 9.361702694 -6.302851755 24.69995135 0.658561037 0.882399722 0.152055585 0.208906692 665.9591705 397202.1392 0.062218261 0.070549599 4.98E-07 6.302851755 0.223838685 TSGPLS(ph)PPTGPPGPAPAGPAVR ddPTM_A459_MK2206_30min_R2 1 TSGPLSPPTGPPGPAPAGPAVR 22 0 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;A0A2R8YHA2 P49815 TSC2 Tuberin 1 TSGPLS(0.998)PPT(0.002)GPPGPAPAGPAVR 124.98 3.18E-05 4475200 18208 15730 15597 13200 14948 13623 17876 12771 14584 11465 TRUE FALSE 19602.01848 14948.87107 16116.9962 12121.51778 14361.06641 14141.43281 15528.85973 14440.21355 15852.48996 11090.89799 1.767396878 1.34785038 1.453173243 1.092924828 1.294851546 1.275048497 1.400144492 1.301987771 1.429324296 1 13.43708856 -3.686116213 1.241430591 1.285206489 7.052502514 0.541204894 0.133994893 14.37223313 2.216991563 0.037510396 195.8934855 0.000206008 3.686116213 5.767296025 TSGS(ph)DDPGICSNTDSTQAQVLLGK ddPTM_A459_MK2206_30min_R2 1 TSGSDDPGICSNTDSTQAQVLLGK 24 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 T(0.258)S(0.327)GS(0.415)DDPGICSNTDSTQAQVLLGK 126.45 9.19E-08 4010400 52172 44115 42975 32001 24636 21665 24274 23077 15418 25122 TRUE FALSE 56166.32843 41924.31325 44407.76505 29386.41593 23668.66685 22489.47676 21086.79464 26093.24314 16759.02977 24302.2712 2.311155529 1.725119143 1.827309254 1.20920451 0.973928184 0.925406378 0.867688228 1.073695661 0.689607553 1 14.56880353 -5.603926582 1.002549047 0.889222231 2.237886884 0.90681656 0.150200087 0.192051125 0.335087739 0.054017365 0.210645662 2.49E-06 5.603926582 1.348664654 up TSGVPGNRPGS(ph)VIR ddPTM_A459_MK2206_30min_R1 2 TSGVPGNRPGSVIR 14 1 A0A087X2D8;O60271-4;O60271-2;O60271-9;O60271 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 TSGVPGNRPGS(1)VIR;TSGVPGNRPGS(1)VIR 127.18 0.0058747 37794000 6322.2 7744 7849 6771.5 7193 6177.2 6442.1 7242.1 6167.5 5634.1 TRUE FALSE 5784.463691 7239.864192 7316.231749 7293.042103 6906.487579 6526.947726 6012.359263 7178.783083 6808.633696 6332.094843 0.913515011 1.143360037 1.15542043 1.151758191 1.090711328 1.030772262 0.94950556 1.133713765 1.075257693 1 12.62846715 -6.68950792 5.652540194 1.040780083 1.10165238 0.094319638 0.079057936 0.483301322 27.42811971 0.027201374 0.026940976 2.04E-07 6.68950792 0.060872296 TSISDPPES(ph)PPLLPPR ddPTM_A459_MK2206_30min_R2 1 TSISDPPESPPLLPPR 16 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 T(0.006)S(0.006)IS(0.107)DPPES(0.882)PPLLPPR 88.768 0.013682 2404000 17951 13292 16969 20363 17023 16265 24205 16013 13394 20953 TRUE FALSE 19325.34236 12631.93861 17534.73799 18699.27776 16354.59149 16883.97597 21026.85442 18105.95408 14558.98591 20269.30533 0.953428943 0.623205305 0.865088256 0.92254162 0.806864923 0.832982468 1.037374201 0.893269591 0.718277498 1 14.30700902 -5.495941116 24.4921537 0.884309714 0.777274525 0.103576186 0.11371962 1114.466337 1013289.167 0.028790869 0.059628246 3.19E-06 5.495941116 -0.107035189 TSISDPPES(ph)PPLLPPREPVR ddPTM_A459_MK2206_30min_R1 2 TSISDPPESPPLLPPREPVR 20 1 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 T(0.001)S(0.001)IS(0.007)DPPES(0.99)PPLLPPREPVR;T(0.001)S(0.001)IS(0.005)DPPES(0.994)PPLLPPREPVR 84.375 0.0014136 40488000 5840.9 5409.3 5853.9 5433.6 5851.9 5220.3 5833.6 6115.5 4922.5 4684.2 TRUE FALSE 5344.100783 5057.153587 5456.553578 5852.096813 5618.806431 5515.868875 5444.451188 6062.032828 5434.21149 5264.51406 1.015117582 0.960611659 1.036478109 1.111611964 1.06729821 1.047745112 1.034179247 1.151489531 1.032234206 1 12.36208465 -5.493210936 6.486276974 1.068609309 0.98978658 0.329861617 0.042275488 0.189095145 26.96309502 0.0107769 0.021675297 3.21E-06 5.493210936 -0.078822728 TSISDPPES(ph)PPLLPPREPVR ddPTM_A459_MK2206_30min_R2 3 TSISDPPESPPLLPPREPVR 20 1 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 T(0.003)S(0.003)IS(0.022)DPPES(0.973)PPLLPPREPVR;TSIS(0.002)DPPES(0.998)PPLLPPREPVR;TSIS(0.003)DPPES(0.997)PPLLPPREPVR 84.371 0.001414 28836500 80867 119154 111546 117538 129360 121593 127505 91129 123044 112023 TRUE FALSE 87058.2397 113236.9856 115264.888 107934.7694 124280.6764 126220.3068 110763.4403 103039.8732 133746.1447 108367.6987 0.80335968 1.04493301 1.063646173 0.996004997 1.146842444 1.164741047 1.022107525 0.950835668 1.23418829 1 16.72557527 -4.753451954 3.846750374 1.071290132 0.768321525 0.483264435 0.082901591 0.244667899 6.341504193 0.020595865 0.218750194 1.76E-05 4.753451954 -0.302968607 TSKEPPSS(ph)PLQPQK ddPTM_A459_MK2206_30min_R1 2 TSKEPPSSPLQPQK 14 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 T(0.093)S(0.021)KEPPS(0.091)S(0.795)PLQPQK;TSKEPPS(0.017)S(0.983)PLQPQK 124.45 0.00081372 76950000 20562 20294.2 19961 16621.4 16814.4 13921.2 14468.4 17066.4 11551.9 9008.3 TRUE FALSE 18813.09392 18973.04389 18606.10293 17901.58311 16144.64684 14709.40631 13503.23944 16917.19026 12752.76134 10124.31621 1.858208844 1.874007438 1.837763908 1.768177004 1.594640715 1.45287899 1.333743351 1.670946453 1.259617052 1 13.30553685 -5.385441 0.102985899 0.532055315 3.059210828 0.848618763 0.109203697 16.56371276 0.34576134 2.200884824 7.019979322 4.12E-06 5.385441 2.527155513 TSKEPPSS(ph)PLQPQK ddPTM_A459_MK2206_30min_R2 2 TSKEPPSSPLQPQK 14 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 TSKEPPS(0.064)S(0.935)PLQPQK;TSKEPPS(0.02)S(0.98)PLQPQK 130.02 0.00055309 68874000 151657 224676 195612 195293 206647 158286 196246 146275 153804 180901 TRUE FALSE 163267.9765 213518.9165 202133.6064 179336.9372 198533.0005 164309.6846 170478.6645 165393.6447 167181.5939 174998.2152 0.932969381 1.220120539 1.15506096 1.02479295 1.134485859 0.93892206 0.974173732 0.945116181 0.955333137 1 17.41698068 -6.764743689 24.99937678 0.959995311 1.100125757 0.437228663 0.073960903 77.36667096 585327.5179 0.024943685 0.022905034 1.72E-07 6.764743689 0.140130446 TSLAGDTSNSS(ph)SPASTGAK ddPTM_A459_MK2206_30min_R2 2 TSLAGDTSNSSSPASTGAK 19 0 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390;H0Y4F5;H0Y314;H0Y6T5 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 TSLAGDT(0.007)S(0.031)NS(0.133)S(0.415)S(0.415)PASTGAK;TSLAGDTS(0.001)NS(0.04)S(0.473)S(0.473)PAS(0.012)T(0.001)GAK 314.02 4.15E-117 11276700 100847 82130 72182 90033 101516 79977 95812 68414 69590 93621 TRUE FALSE 108567.9239 78051.54363 74588.51185 82677.0159 97529.97176 83020.58078 83231.76931 77355.9447 75642.81241 90566.15444 1.198769281 0.861818017 0.823580424 0.912890874 1.076892051 0.916684398 0.919016269 0.854137455 0.835221644 1 16.46668438 -7.246788345 2.878609188 0.886709991 0.958393777 0.073793426 0.109322682 0.793627078 13.2249019 0.049963043 0.034320902 5.67E-08 7.246788345 0.071683785 TSLAGDTSNSSS(ph)PASTGAK ddPTM_A459_MK2206_30min_R1 1 TSLAGDTSNSSSPASTGAK 19 0 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390;H0Y4F5;H0Y314;H0Y6T5 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 TSLAGDTSNSS(0.005)S(0.771)PAS(0.208)T(0.017)GAK 314.11 4.03E-117 5602800 4105.6 3101.1 3415.2 2781 2541.7 2119.3 3040 2809.3 2838.5 2692.3 TRUE FALSE 3756.397161 2899.217826 3183.385739 2995.193102 2440.458707 2239.292935 2837.207147 2784.738586 3133.572233 3025.84245 1.24143845 0.958152275 1.052065926 0.989870805 0.806538591 0.740056025 0.937658584 0.920318434 1.035603236 1 11.56312116 -1.522878776 0.817354002 0.909493964 90.47169962 0.491347039 0.092778201 492.1227398 1.585401429 0.035114559 81741.48571 0.029999998 1.522878776 89.56220565 TSLAGDTSNSSS(ph)PASTGAK ddPTM_A459_MK2206_30min_R2 2 TSLAGDTSNSSSPASTGAK 19 0 H3BQK9;H3BPE1;Q9UPN3;A0A590UJG2;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;Q9UPN3-5;H0Y390;H0Y4F5;H0Y314;H0Y6T5 H3BQK9 MACF1 "Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5" 1 TSLAGDTSNSS(0.002)S(0.997)PASTGAK;TSLAGDTSNSS(0.002)S(0.913)PAS(0.078)T(0.007)GAK 313.59 4.17E-223 5504700 56551 54707 46943 50647 54944 38016 55564 40679 39777 57535 TRUE FALSE 60880.58804 51990.32993 48508.05619 46508.97809 52786.62249 39462.72552 48268.38006 45995.88497 43236.73156 55657.63766 1.093840677 0.934109533 0.871543569 0.835626161 0.94841651 0.709026239 0.867237312 0.826407424 0.776833753 1 15.76429206 -3.577520661 0.894842002 0.839413911 2.89680375 0.471052681 0.077068465 12.58841171 1.478729035 0.024460817 41.43381571 0.000264533 3.577520661 2.057389839 TSLDIEEYS(ph)DTEVQK ddPTM_A459_MK2206_30min_R1 3 TSLDIEEYSDTEVQK 15 0 P51580 P51580 TPMT Thiopurine S-methyltransferase 1 TSLDIEEYS(0.974)DT(0.026)EVQK;TSLDIEEYS(0.962)DT(0.038)EVQK;TSLDIEEYS(0.795)DT(0.205)EVQK 268.61 7.97E-45 18275500 6905.8 6916.4 7149.5 6059.4 6242.7 5697 6331.6 6880 6019.1 6522.9 TRUE FALSE 6318.425446 6466.141103 6664.21186 6526.096038 5994.04004 6019.559217 5909.230517 6819.848885 6644.806985 7331.006097 0.861876987 0.882026425 0.909044648 0.890204694 0.817628571 0.821109564 0.806059965 0.930274616 0.906397689 1 12.83979549 -8.493530492 1.410365682 0.996037896 0.859366431 0.569436727 0.03692654 0.342501895 1.498129931 0.038660499 0.011609123 3.21E-09 8.493530492 -0.136671465 TSLDIEEYS(ph)DTEVQK ddPTM_A459_MK2206_30min_R2 2 TSLDIEEYSDTEVQK 15 0 P51580 P51580 TPMT Thiopurine S-methyltransferase 1 TSLDIEEYS(1)DTEVQK;TSLDIEEYS(1)DTEVQK 228.73 8.86E-14 6565200 27473 29918 27719 30708 29555 25441 32182 25404 22124 28208 TRUE FALSE 29576.354 28432.31562 28643.13763 28199.05817 28394.5222 26409.17508 27956.46474 28724.39002 24048.30553 27287.57527 1.083876222 1.041950974 1.049676908 1.033402854 1.040565969 0.967809518 1.024512602 1.052654541 0.881291404 1 14.73595658 -6.29557689 0.431882363 0.972542254 1.082806189 0.371456458 0.04301452 1.915900627 0.655007455 0.039413784 0.094603126 5.06E-07 6.29557689 0.110263935 TSLPLS(ph)PVK ddPTM_A459_MK2206_30min_R1 2 TSLPLSPVK 9 0 Q86XL3;Q86XL3-2 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 T(0.078)S(0.005)LPLS(0.918)PVK;TSLPLS(1)PVK 120.77 0.0064738 31713000 11183.3 10422 10215.1 8349.7 8502 7132.8 8015 7722.9 9711.3 7773 TRUE FALSE 10232.10161 9743.525906 9521.727473 8992.795341 8163.347337 7536.652972 7480.333974 7655.3795 10720.82439 8735.977923 1.171260012 1.115333165 1.089944086 1.029397672 0.934451461 0.862714288 0.8562675 0.876304813 1.227203695 1 13.0927535 -5.837735569 1.827157941 0.943825663 1.139669977 0.343669133 0.102366254 0.379957213 2.589318941 0.033262278 0.06312938 1.45E-06 5.837735569 0.195844314 TSLPLS(ph)PVK ddPTM_A459_MK2206_30min_R2 2 TSLPLSPVK 9 0 Q86XL3;Q86XL3-2 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 T(0.138)S(0.001)LPLS(0.861)PVK;T(0.419)S(0.002)LPLS(0.579)PVK 125.97 0.0049164 32350000 372330 276920 294920 255180 280850 218791 378240 221310 231440 260600 TRUE FALSE 400835.8711 263168.5555 304752.4856 234330.9777 269822.4178 227117.2448 328576.6337 250235.9769 251570.2329 252096.6433 1.590008759 1.043919316 1.208871652 0.929528353 1.070313409 0.900913403 1.303375679 0.992619233 0.99791187 1 17.94361738 TSLPTVGPSGLYS(ph)PSTNR ddPTM_A459_MK2206_30min_R1 1 TSLPTVGPSGLYSPSTNR 18 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 TSLPTVGPS(0.004)GLYS(0.92)PS(0.025)T(0.05)NR 148.97 0.00018129 11722000 5238.4 5358 5540.4 4925 4648.9 4186.5 5220.4 5275.7 4809.7 4390.6 TRUE FALSE 4792.846572 5009.193226 5164.333084 5304.324353 4463.724469 4423.536012 4872.156641 5229.575111 5309.685527 4934.540675 0.97128525 1.015128571 1.046568146 1.074937811 0.904587633 0.896443317 0.987357682 1.059789645 1.07602427 1 12.26870008 -7.755487134 23.85196822 1.050930227 0.985638088 0.196546959 0.055310519 135.2139893 541844.339 0.030086339 0.016749755 1.76E-08 7.755487134 -0.065292139 TSLPTVGPSGLYS(ph)PSTNR ddPTM_A459_MK2206_30min_R2 3 TSLPTVGPSGLYSPSTNR 18 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 TSLPTVGPS(0.003)GLYS(0.954)PS(0.029)T(0.013)NR;TSLPTVGPS(0.028)GLYS(0.903)PS(0.023)T(0.046)NR;TSLPTVGPS(0.001)GLYS(0.973)PS(0.008)T(0.018)NR 220.1 2.25E-14 13079400 51120.1 61420 49520.3 52889.2 55251.5 45408.1 65043 40916.4 39634.3 58485 TRUE FALSE 55033.89416 58369.97211 51171.28209 48567.98318 53082.04849 47136.13706 56502.77597 46264.31397 43081.61977 56576.63924 0.972731765 1.031697409 0.904459557 0.858445886 0.938232621 0.833137806 0.998694456 0.817728211 0.761473646 1 15.78791886 -5.361954859 5.035148499 0.883782849 1.001498666 0.275564911 0.073539583 0.260185464 10.15774014 0.019093015 0.041323021 4.35E-06 5.361954859 0.117715817 TSLQGLTGTPLVAGS(ph)PIR ddPTM_A459_MK2206_30min_R1 1 TSLQGLTGTPLVAGSPIR 18 0 Q96A47 Q96A47 ISL2 Insulin gene enhancer protein ISL-2 1 TSLQGLT(0.002)GT(0.001)PLVAGS(0.996)PIR 109.42 0.0014495 6401100 1179.4 2076.6 1533.3 1706.3 1035.2 1035 1053.7 1214.2 1300 1350.7 TRUE FALSE 1079.085837 1941.412963 1429.223868 1837.719522 993.9657919 1093.600806 983.4095956 1203.584377 1435.139652 1518.034913 0.710843886 1.278898756 0.941496046 1.210591078 0.654771365 0.720405569 0.647817509 0.792856849 0.945393047 1 10.56798926 -6.267460193 24.99589818 0.772240647 1.04613458 0.300969836 0.178561571 533.5988642 2215275.126 0.052459902 0.061002714 5.40E-07 6.267460193 0.273893933 TSLQGLTGTPLVAGS(ph)PIR ddPTM_A459_MK2206_30min_R2 2 TSLQGLTGTPLVAGSPIR 18 0 Q96A47 Q96A47 ISL2 Insulin gene enhancer protein ISL-2 1 TSLQGLTGTPLVAGS(1)PIR;TSLQGLT(0.001)GT(0.012)PLVAGS(0.987)PIR 139 0.00033003 11373300 48267 33855 36228 39076 28283 30589 36192 36882 25346 38915 TRUE FALSE 51962.35863 32173.80993 37435.82344 35883.3658 27172.46731 31753.08583 31439.94693 41702.60403 27550.54926 37645.20674 1.380318057 0.854658872 0.994437983 0.953198798 0.721804173 0.843482838 0.835164677 1.107779918 0.731847469 1 15.20017856 -4.758682855 24.99694301 0.893218497 1.38031871 0.613998206 0.115773984 49.96433653 453004.405 0.028164557 0.189014115 1.74E-05 4.758682855 0.487100213 TSLS(ph)FQDPK ddPTM_A459_MK2206_30min_R1 1 TSLSFQDPK 9 0 P48681 P48681 NES Nestin 1 T(0.011)S(0.008)LS(0.981)FQDPK 81.525 0.043654 1554300 2612.2 2379.3 2559.8 2138.6 2175.2 1954.3 2376.3 2374.7 2272.6 2107.5 TRUE FALSE 2390.018673 2224.407138 2386.047908 2303.315343 2088.557178 2064.950777 2217.781363 2353.938248 2508.844903 2368.593011 1.009045734 0.93912594 1.00736931 0.972440319 0.881771232 0.871804809 0.936328594 0.993812883 1.059213166 1 11.20981461 -7.940905226 3.999061205 1.029509365 0.943578244 0.3688911 0.044786053 0.245803556 7.917542976 0.030751093 0.013183588 1.15E-08 7.940905226 -0.085931121 TSLS(ph)PTSK ddPTM_A459_MK2206_30min_R1 2 TSLSPTSK 8 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7C0Q4 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 T(0.023)S(0.013)LS(0.488)PT(0.469)S(0.007)K;TSLS(0.772)PT(0.228)SK 167.93 0.00022492 145188000 20425.7 22095 22809 18327.7 18164.8 14742.1 17753.1 16969.3 13088.3 15275.1 TRUE FALSE 18688.38696 20656.61148 21260.78863 19739.30263 17441.25755 15576.78496 16568.82309 16820.9392 14448.87562 17167.49471 1.088591392 1.203239718 1.238432805 1.149806828 1.015946581 0.907341766 0.965127607 0.979813274 0.841641478 1 14.0673919 -6.352159452 2.686096851 0.939846147 1.181369256 0.801103603 0.054398812 0.117255228 1.651484106 0.017976435 0.021299291 4.44E-07 6.352159452 0.241523109 TSLSPT(ph)SK ddPTM_A459_MK2206_30min_R1 2 TSLSPTSK 8 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7C0Q4 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 TSLS(0.174)PT(0.821)S(0.005)K;TSLS(0.088)PT(0.908)S(0.004)K 152.11 0.0024491 140493000 25694 26181 25454 20894.8 20033.3 17314.9 21479.3 21194.5 15323.3 19116.5 TRUE FALSE 23508.59038 24476.61214 23726.2534 22504.12112 19235.33124 18295.25467 20046.45509 21009.19872 16916.21187 21484.79634 1.094196566 1.139252695 1.104327592 1.047444004 0.895299678 0.851544245 0.933053065 0.977863527 0.787357329 1 14.39102848 -6.103335236 2.907139339 0.904465858 1.113716411 0.725390775 0.057812616 0.136031466 2.220312908 0.017523324 0.024275299 7.88E-07 6.103335236 0.209250553 TSNRYS(ph)PESQAQSVHHQRPGSR ddPTM_A459_MK2206_30min_R2 1 TSNRYSPESQAQSVHHQRPGSR 22 2 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KS29;J3QKP0 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 T(0.146)S(0.146)NRY(0.32)S(0.376)PES(0.011)QAQSVHHQRPGSR 42.679 0.042851 3101100 778.69 5013.6 2884.6 6332.4 7579.4 9023.2 6959.5 4237.5 6568.5 2731.6 TRUE FALSE 838.3071051 4764.631914 2980.771124 5815.022664 7281.794673 9366.584199 6045.70929 4791.3558 7139.816257 2642.468116 0.317243981 1.803099113 1.128025389 2.200602773 2.755679294 3.544634708 2.287902455 1.813212342 2.701949823 1 11.36767035 -5.816982852 3.871545241 2.450798211 1.138572393 0.389411724 0.708384231 0.221323779 6.731907934 0.202012962 0.324350415 1.52E-06 5.816982852 -1.312225818 TSNS(ph)LTEDSK ddPTM_A459_MK2206_30min_R1 1 TSNSLTEDSK 10 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0;H7C3N7 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 TS(0.001)NS(0.988)LT(0.006)EDS(0.004)K 105.19 0.012662 10721000 8023.7 8969.3 8794.8 7547.2 6156.9 5653.3 6525.9 6656.8 5081.4 7547.8 TRUE FALSE 7341.242181 8385.39694 8197.83348 8128.486652 5911.657636 5973.384961 6090.569118 6598.600299 5609.629714 8482.878447 0.865418764 0.98850844 0.966397613 0.958222696 0.696892885 0.704169581 0.717983778 0.777872787 0.661288471 1 13.05033817 -6.254911125 24.83844807 0.743732431 0.949324912 0.480476604 0.093275954 359.9420854 1369492.407 0.025903963 0.032641147 5.56E-07 6.254911125 0.205592481 TSNS(ph)LTEDSK ddPTM_A459_MK2206_30min_R2 2 TSNSLTEDSK 10 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0;H7C3N7 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 T(0.001)S(0.001)NS(0.521)LT(0.477)EDSK;T(0.001)S(0.001)NS(0.893)LT(0.105)EDSK 89.301 0.031036 19693100 68023 91582 98962 127941 102659 167342 91888 86599 113004 85664 TRUE FALSE 73230.89318 87034.17105 102261.3437 117487.811 98628.09184 173710.3171 79822.99522 97917.78664 122832.8837 82868.7907 0.883696897 1.050264766 1.234015156 1.417757036 1.190171728 2.096209147 0.963245566 1.181600284 1.482257465 1 16.33854125 -5.162444411 1.771631386 1.351696051 0.869896068 0.192557184 0.301455182 0.763662604 3.892989091 0.085434433 0.478386363 6.88E-06 5.162444411 -0.481799983 TSPADHGGS(ph)VGSESGGSAVDSVAGEHSVSGR ddPTM_A459_MK2206_30min_R2 1 TSPADHGGSVGSESGGSAVDSVAGEHSVSGR 31 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.043)S(0.043)PADHGGS(0.894)VGS(0.014)ES(0.006)GGSAVDSVAGEHSVSGR 95.654 3.53E-08 16693000 4183.7 3848.3 3866.5 4926.1 4384.9 6727.8 5706.2 1695.1 3942.5 6535.3 TRUE FALSE 4504.007289 3657.199018 3995.40718 4523.621872 4212.726794 6983.831143 4956.969086 1916.65539 4285.411524 6322.053696 0.712427876 0.578482752 0.631979318 0.715530441 0.666354162 1.104677606 0.784075765 0.303169742 0.677851175 1 12.62617757 -5.904518533 2.676247251 0.738050983 0.634304213 0.055564554 0.203078376 1.106607723 16.04624687 0.065844485 0.10613837 1.25E-06 5.904518533 -0.10374677 TSPADHGGSVGS(ph)ESGGSAVDSVAGEHSVSGR ddPTM_A459_MK2206_30min_R1 1 TSPADHGGSVGSESGGSAVDSVAGEHSVSGR 31 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.209)S(0.209)PADHGGS(0.209)VGS(0.349)ES(0.023)GGSAVDSVAGEHSVSGR 51.66 0.033733 0 723.29 483.68 632.19 637.59 486.38 581.93 706.27 778.95 604.14 613.8 TRUE FALSE 661.7703874 452.1923441 589.2787042 686.6972923 467.0064547 614.8783737 659.156017 772.1397223 666.9425149 689.842178 0.959306938 0.655501155 0.854222492 0.995441152 0.676975792 0.89133195 0.955517128 1.11929909 0.96680449 1 9.43012253 -7.304722714 2.779876062 1.031096774 0.827663793 0.393215206 0.107203116 0.270446226 4.145310939 0.048834699 0.031900072 4.96E-08 7.304722714 -0.20343298 TSPADHGGSVGSESGGSAVDSVAGEHS(ph)VSGR ddPTM_A459_MK2206_30min_R1 1 TSPADHGGSVGSESGGSAVDSVAGEHSVSGR 31 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 TSPADHGGSVGSESGGSAVDS(0.425)VAGEHS(0.452)VS(0.123)GR 75.821 1.98E-05 7962400 1352.2 1244.7 1414 1035.5 1395.8 1127.9 1385.9 1134.3 1047.3 962.27 TRUE FALSE 1237.188289 1163.669804 1318.02162 1115.254389 1340.20233 1191.760723 1293.44914 1124.382935 1156.170583 1081.483272 1.143973579 1.07599427 1.218716603 1.031226666 1.23922613 1.101968707 1.195995512 1.03966743 1.06906007 1 10.07879564 -7.781924091 24.70330572 1.04077271 1.141862948 0.383540143 0.06241418 227.3691406 274188.7689 0.031347578 0.015088054 1.65E-08 7.781924091 0.101090238 TSPADHGGSVGSESGGSAVDSVAGEHSVS(ph)GR ddPTM_A459_MK2206_30min_R1 1 TSPADHGGSVGSESGGSAVDSVAGEHSVSGR 31 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 TSPADHGGSVGS(0.001)ES(0.001)GGS(0.002)AVDS(0.007)VAGEHS(0.296)VS(0.694)GR 65.08 0.00026265 8183200 1482.6 1128.8 1182 1046.8 1332.1 1273.3 1321.6 1073.8 847.88 897.52 TRUE FALSE 1356.497085 1055.314915 1101.769133 1127.424717 1279.039636 1345.393146 1233.438475 1064.41188 936.0201602 1008.711554 1.344781945 1.04620088 1.092253905 1.117687919 1.267993443 1.333773903 1.222786109 1.055219281 0.927936393 1 9.978297972 -7.933135746 3.809713042 0.968976548 1.197017984 0.519497399 0.094549472 0.200512512 5.748689514 0.064811557 0.02758879 1.17E-08 7.933135746 0.228041436 TSPASLDFPESQKS(ph)SR ddPTM_A459_MK2206_30min_R1 1 TSPASLDFPESQKSSR 16 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TSPASLDFPES(0.003)QKS(0.626)S(0.371)R 96.455 0.0044819 9603600 4829.7 5367.8 4787.2 4789.8 4476.3 3048 2681.7 2551.4 1980.8 1655.9 TRUE FALSE 4418.908653 5018.355244 4462.258202 5158.711226 4297.999492 3220.575126 2502.808686 2529.093379 2186.711248 1861.045393 2.374422821 2.696524901 2.397715938 2.771942718 2.309454411 1.730519383 1.344840214 1.358963832 1.174990818 1 10.86189753 -6.907972279 1.657724466 1.215083739 2.570551729 0.948393944 0.143637558 0.073537782 0.414168115 0.063580777 0.051579162 1.24E-07 6.907972279 1.35546799 up TSPASLDFPESQKSS(ph)R ddPTM_A459_MK2206_30min_R2 1 TSPASLDFPESQKSSR 16 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TSPASLDFPES(0.002)QKS(0.183)S(0.815)R 70.987 0.022623 10855000 39798 43133 38092 49299 43653 30236 34906 16217 23018 17357 TRUE FALSE 42844.96548 40991.07794 39361.96827 45271.114 41938.96388 31386.65217 30322.80027 18336.61758 25020.06403 16790.64251 2.551716854 2.441304906 2.34428005 2.696210938 2.497758132 1.86929429 1.805934481 1.09207361 1.490119512 1 14.03536982 -7.253794379 1.210196019 1.17813558 2.519900374 0.901752389 0.185031506 0.133567109 0.381596152 0.118157099 0.06804175 5.57E-08 7.253794379 1.341764793 TSPDTLRR ddPTM_A459_MK2206_30min_R1 1 TSPDTLRR 8 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 0 113.26 0.014646 2050300 2172.6 1922.3 2128.9 2285.5 2395.9 1573 1972.5 1917.8 548.02 763.63 FALSE TRUE 1987.808961 1797.157921 1984.396199 2461.529606 2300.46623 1662.061901 1840.918124 1901.032877 604.9886401 858.2342495 2.316161307 2.094017946 2.312184815 2.868132573 2.680464257 1.936606354 2.145006594 2.215051285 0.704922509 1 9.745227666 -8.233937469 6.345313565 0.847459975 2.328375175 0.828945152 0.266885364 0.067924783 10.20012672 0.216835214 0.075527594 5.84E-09 8.233937469 1.4809152 TSPDTLRR ddPTM_A459_MK2206_30min_R2 2 TSPDTLRR 8 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 0 ; 98.629 0.02612 4514600 18964.1 28543 26386 29322 29877 26578 22768.4 17849.6 27862.4 21172.4 FALSE TRUE 20416.00608 27125.59613 27265.69607 26926.2988 28703.87886 27589.44441 19778.88173 20182.60401 30285.82119 20481.54632 0.996800034 1.324392001 1.331232303 1.314661422 1.40145077 1.347039134 0.965692796 0.985404309 1.478688216 1 14.32203702 -7.243455277 24.7856773 1.10623001 1.296293801 0.207205615 0.170304634 1132.144252 1560322.004 0.064925024 0.050173951 5.71E-08 7.243455277 0.190063791 TSPS(ph)PDSLGLPEDPCLGPR ddPTM_A459_MK2206_30min_R1 1 TSPSPDSLGLPEDPCLGPR 19 0 Q6F5E8-2;Q6F5E8 Q6F5E8-2 RLTPR Leucine-rich repeat-containing protein 16C 1 T(0.076)S(0.076)PS(0.849)PDSLGLPEDPCLGPR 122.52 0.00042002 2845700 613.41 478.53 650.75 454.49 464.61 625.83 459.43 508.16 549.32 522.9 TRUE FALSE 561.2362584 447.37761 606.5789031 489.4948985 446.1035999 661.2639538 428.782263 503.7172107 606.4237798 587.6807997 0.955001863 0.761259531 1.032157088 0.832926478 0.75909167 1.125209389 0.729617614 0.857127221 1.03189313 1 9.198888954 -8.263196432 24.86267289 1.015946579 0.879914477 0.167544206 0.119786283 255.2246024 3611316.441 0.092794833 0.028818346 5.46E-09 8.263196432 -0.136032102 TSPS(ph)SPAPLPHQEATPR ddPTM_A459_MK2206_30min_R1 1 TSPSSPAPLPHQEATPR 17 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 T(0.001)S(0.001)PS(0.911)S(0.087)PAPLPHQEATPR 213.69 1.40E-09 5808300 2208.3 2602.4 2491 2498.4 3035 2837.2 3435.6 3098 2998.2 3028.2 TRUE FALSE 2020.472489 2432.983287 2321.91786 2690.827201 2914.109523 2997.839812 3206.417393 3070.914513 3309.873619 3403.356278 0.593670578 0.714877635 0.682243547 0.790639293 0.856245801 0.880848071 0.94213392 0.902319435 0.972532215 1 11.73274247 -5.431736714 0.374483012 0.995530096 0.442401904 0.953447025 0.027517301 0.720761209 0.115475732 0.025764855 0.172130229 3.70E-06 5.431736714 -0.553128193 TSPS(ph)SPAPLPHQEATPR ddPTM_A459_MK2206_30min_R2 1 TSPSSPAPLPHQEATPR 17 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 T(0.004)S(0.004)PS(0.633)S(0.358)PAPLPHQEATPR 114.3 0.0011427 40342000 20094 14448 16272 18861 18329 21537 23451 11123 18550 24249 TRUE FALSE 21632.41209 13730.53333 16814.50036 17319.99597 17609.31136 22356.60563 20371.85553 12576.81429 20163.44547 23457.75712 0.922185867 0.585330186 0.71679915 0.738348337 0.750681801 0.953058109 0.868448566 0.536147349 0.859564082 1 14.51777746 -6.543971688 24.84783501 0.819999458 0.729946824 0.103558215 0.138817421 600.3131144 707173.6597 0.046070189 0.046074396 2.86E-07 6.543971688 -0.090052634 TSPSGGTWSSVVSGVPRLS(ph)PK ddPTM_A459_MK2206_30min_R1 1 TSPSGGTWSSVVSGVPRLSPK 21 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4 Q99700 ATXN2 Ataxin-2 1 TSPSGGTWS(0.005)S(0.001)VVS(0.005)GVPRLS(0.99)PK 75.044 0.0017082 32509000 2273.3 2152.6 2527.2 2343.8 1857.1 1357.6 1804.4 2132 1576.8 1145.8 TRUE FALSE 2079.943897 2012.465349 2355.660705 2524.319882 1783.127775 1434.466139 1684.031768 2113.360149 1740.714003 1287.750354 1.615176335 1.562776001 1.829283678 1.96025563 1.384684359 1.113931853 1.307731551 1.641125659 1.351748028 1 10.33063722 -6.400444783 6.512781305 1.316880817 1.733636618 0.57197725 0.187713506 0.205250101 10.09103664 0.061785651 0.070008643 3.98E-07 6.400444783 0.416755801 TSPSGGTWSSVVSGVPRLS(ph)PK ddPTM_A459_MK2206_30min_R2 1 TSPSGGTWSSVVSGVPRLSPK 21 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHX3;A0A5F9ZHH4 Q99700 ATXN2 Ataxin-2 1 TSPSGGT(0.001)WS(0.001)S(0.001)VVS(0.001)GVPRLS(0.995)PK 59.154 0.012785 13060000 10276 21543 16667 17973 20510 13086 18808 12984 21785 18594 TRUE FALSE 11062.73846 20473.20595 17222.66946 16504.54841 19704.67435 13583.9969 16338.48701 14681.05338 23679.81992 17987.2793 0.615031227 1.138204706 0.957491635 0.917567806 1.095478311 0.755200198 0.908335648 0.816190883 1.316475912 1 14.13468937 -8.252519375 24.99775765 1.158237966 0.912759317 0.288601763 0.16097404 723.8328056 2028510.607 0.106359233 0.038865409 5.59E-09 8.252519375 -0.245478648 TSPSS(ph)PAPLPHQEATPR ddPTM_A459_MK2206_30min_R1 3 TSPSSPAPLPHQEATPR 17 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 TSPS(0.007)S(0.993)PAPLPHQEATPR;TSPS(0.027)S(0.973)PAPLPHQEATPR;T(0.007)S(0.007)PS(0.041)S(0.944)PAPLPHQEATPR 281.49 8.67E-64 49675000 5080.7 4926.6 4481.7 4121.2 5466.3 5078.5 5724 5748.5 5900.6 5001.9 TRUE FALSE 4648.559785 4605.877445 4177.494691 4438.615538 5248.565696 5366.040281 5342.162404 5698.241471 6513.988486 5621.573134 0.826914402 0.819321804 0.743118446 0.789568228 0.933647143 0.954544245 0.950296701 1.013638235 1.158748331 1 12.45675819 -6.86844408 0.879519554 1.060787688 0.786949772 0.795399005 0.053816907 0.266317645 0.440147694 0.037139422 0.031011104 1.35E-07 6.86844408 -0.273837916 TSPSS(ph)PAPLPHQEATPR ddPTM_A459_MK2206_30min_R2 2 TSPSSPAPLPHQEATPR 17 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 TSPS(0.005)S(0.995)PAPLPHQEATPR;T(0.122)S(0.122)PS(0.153)S(0.603)PAPLPHQEATPR 157.57 2.68E-05 48910100 46255 38755 34308 42045 31604 59734 44742 24925 45873 40047.5 TRUE FALSE 49796.31836 36830.48306 35451.8116 38609.789 30363.06816 62007.21923 38867.32166 28182.78308 49862.95062 38740.75335 1.285373 0.950690936 0.915103825 0.996619468 0.78375007 1.600568235 1.003267058 0.727471219 1.287092953 1 15.24156439 -9.747556302 0.003819783 0.52424016 1.552774205 0 0.250053321 1196742.916 1222.687463 167226.3896 162003.2074 1.79E-10 9.747556302 1.028534045 TSPTT(ph)PEASAT(ph)NSPCTSKPATPAPSEK ddPTM_A459_MK2206_30min_R1 1 TSPTTPEASATNSPCTSKPATPAPSEK 27 1 Q12873-2;Q12873;Q12873-3 Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 2 T(0.044)S(0.018)PT(0.124)T(0.549)PEAS(0.302)AT(0.408)NS(0.325)PCT(0.181)S(0.044)KPAT(0.005)PAPSEK 73.761 0.00037245 6334500 1426.9 1182.3 1303.8 1004.5 896.23 877.9 1280.1 1378.1 1290.7 1438.7 TRUE FALSE 1305.534662 1105.332055 1215.301689 1081.866764 860.5312613 927.6059393 1194.706865 1366.051417 1424.872884 1616.937018 0.807412192 0.683596234 0.751607314 0.669084047 0.53219838 0.573680935 0.738870378 0.844838978 0.881217307 1 10.65904777 -7.970800909 1.61247866 0.960640275 0.668040599 0.665964089 0.077882383 0.260354459 1.221014683 0.074928526 0.025354114 1.07E-08 7.970800909 -0.292599675 TSPTT(ph)PEASATNSPCT(ph)SKPATPAPSEK ddPTM_A459_MK2206_30min_R2 1 TSPTTPEASATNSPCTSKPATPAPSEK 27 1 Q12873-2;Q12873;Q12873-3 Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 2 T(0.049)S(0.019)PT(0.083)T(0.436)PEAS(0.178)AT(0.134)NS(0.365)PCT(0.577)S(0.159)KPAT(0.001)PAPSEK 65.197 0.0024221 8726500 42880 45913 39514 46919 37806 33399 49597 37389 29828 49285 TRUE FALSE 46162.92577 43633.02718 40831.37704 43085.56761 36321.54648 34670.02235 43084.85432 42275.87068 32422.38552 47676.83449 0.968246451 0.915182974 0.856419632 0.903700258 0.761827979 0.727188009 0.903685297 0.886717231 0.680044845 1 15.54100083 -5.116046084 1.101103058 0.825357901 0.992448293 0.187113741 0.089511841 1.688267287 2.473854362 0.028974797 0.28779914 7.66E-06 5.116046084 0.167090392 TSPTTPEAS(ph)ATNSPCTSKPATPAPSEK ddPTM_A459_MK2206_30min_R2 1 TSPTTPEASATNSPCTSKPATPAPSEK 27 1 Q12873-2;Q12873;Q12873-3 Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 TSPTTPEAS(0.473)AT(0.473)NS(0.05)PCT(0.003)SKPATPAPSEK 105.61 1.27E-09 16395000 33687 29217 33350 32993 31260 24235 40309 32951 31647 42019 TRUE FALSE 36266.10262 27766.12627 34461.87235 30297.36636 30032.57533 25157.27991 35016.37988 37257.80884 34399.59886 40647.92347 0.892200622 0.683088431 0.847813847 0.745360741 0.738846484 0.61890689 0.861455565 0.916598086 0.846281825 1 15.31089403 -7.5060574 22.56566047 0.906669442 0.75308843 0.472473363 0.079967604 182.2165032 244444.548 0.033268496 0.021734512 3.12E-08 7.5060574 -0.153581012 TSPTTPEASAT(ph)NSPCTSKPATPAPSEK ddPTM_A459_MK2206_30min_R2 1 TSPTTPEASATNSPCTSKPATPAPSEK 27 1 Q12873-2;Q12873;Q12873-3 Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 T(0.002)S(0.001)PT(0.007)T(0.025)PEAS(0.126)AT(0.565)NS(0.273)PCT(0.001)SKPATPAPSEK 104.57 3.58E-09 18778000 48777 51606 54323 54680 46085 41686 65744 54260 49932 67357 TRUE FALSE 52511.40462 49043.32108 56134.10171 50212.46909 44275.47134 43272.38994 57111.73383 61351.9683 54274.9951 65159.14661 0.805894604 0.752669788 0.861492279 0.770612749 0.67949741 0.66410308 0.876496038 0.941571084 0.832960496 1 15.99168009 -7.44726425 6.617622231 0.914406775 0.757895617 0.585326063 0.065498335 0.192320794 13.99556786 0.029360112 0.01953748 3.57E-08 7.44726425 -0.156511158 TSPTTPEASATNS(ph)PCTSKPATPAPSEK ddPTM_A459_MK2206_30min_R1 2 TSPTTPEASATNSPCTSKPATPAPSEK 27 1 Q12873-2;Q12873;Q12873-3 Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 TSPTTPEAS(0.011)AT(0.011)NS(0.974)PCT(0.003)SKPATPAPSEK;TSPTTPEAS(0.016)AT(0.016)NS(0.35)PCT(0.306)S(0.306)KPAT(0.006)PAPSEK 113.31 1.91E-10 24472000 3513.9 3268.4 3295.6 2462.87 3221.4 3112.2 3743.8 3231.2 4118.2 3853.2 TRUE FALSE 3215.024353 3055.626566 3071.903854 2652.560674 3093.084817 3288.410074 3494.057933 3202.949959 4546.301627 4330.563506 0.742403234 0.705595602 0.709354302 0.612520904 0.714245343 0.759349232 0.806836784 0.739615053 1.049817563 1 12.08033905 -8.244473798 7.608110259 1.025595392 0.722264617 0.863094027 0.047977719 0.057645285 20.13209894 0.039459057 0.013698496 5.70E-09 8.244473798 -0.303330775 TSPTTPEASATNS(ph)PCTSKPATPAPSEK ddPTM_A459_MK2206_30min_R2 2 TSPTTPEASATNSPCTSKPATPAPSEK 27 1 Q12873-2;Q12873;Q12873-3 Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 TSPTTPEAS(0.005)AT(0.021)NS(0.649)PCT(0.078)S(0.223)KPAT(0.024)PAPSEK;TSPTTPEAS(0.012)AT(0.059)NS(0.907)PCT(0.02)S(0.001)KPAT(0.001)PAPSEK 103.71 2.90E-07 36438000 121647 125901 116963 123692 130034 111843 169431 136342 126052 174203 TRUE FALSE 130960.3879 119648.9394 120862.488 113585.9679 124928.2118 116099.2637 147184.5062 154162.3675 137015.7751 168518.7704 0.777126415 0.710003634 0.717204901 0.674025616 0.741331138 0.688939656 0.873401259 0.914808286 0.813059428 1 17.36254977 -7.320440621 5.275871927 0.896033429 0.716741355 0.759868294 0.050225566 0.104089142 6.133153908 0.020234872 0.013588813 4.78E-08 7.320440621 -0.179292074 TSPTTPEASATNS(ph)PCTSKPATPAPSEKGEGIR ddPTM_A459_MK2206_30min_R2 1 TSPTTPEASATNSPCTSKPATPAPSEKGEGIR 32 2 Q12873-2;Q12873;Q12873-3 Q12873-2 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 TSPTTPEAS(0.08)AT(0.066)NS(0.763)PCT(0.046)S(0.046)KPATPAPSEKGEGIR 88.829 8.01E-08 2976100 773 6435.1 6426.2 5833.6 9103.3 6054.4 7427.9 5158.6 8702.2 5213.9 TRUE FALSE 832.1814743 6115.542292 6640.446301 5356.976219 8745.858702 6284.804435 6452.607807 5832.846732 9459.101626 5043.77087 0.164991927 1.212494074 1.316563831 1.062097458 1.733992072 1.246052725 1.279322153 1.15644562 1.875402723 1 12.30028702 -4.753220121 3.745653963 1.336101521 0.003121957 0.640474022 0.26104539 0.177086502 4.214189094 0.06235917 0.684776942 1.77E-05 4.753220121 -1.332979564 TSPVTASDPAGPSYAAATLQASSAASS(ph)ASPVSR ddPTM_A459_MK2206_30min_R1 1 TSPVTASDPAGPSYAAATLQASSAASSASPVSR 33 0 F5H8D7;P18887;M0QYS5;M0R1U8 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TSPVTASDPAGPSYAAATLQASSAAS(0.038)S(0.436)AS(0.397)PVS(0.129)R 203.88 5.87E-57 18595000 5398.7 4426.1 4693.7 4575.9 4623.2 3973.4 4246.4 4871.2 4346.1 3304.2 TRUE FALSE 4939.512215 4137.960086 4375.104721 4928.336611 4439.048154 4198.370474 3963.130404 4828.611612 4797.892648 3713.549241 1.330132414 1.114287119 1.178146414 1.327123 1.195365368 1.13055468 1.067208255 1.300268637 1.291996507 1 11.85858299 -6.517798533 24.77292312 1.170193393 1.228999295 0.106944009 0.104163138 646.5216083 3152699.273 0.034684639 0.035682378 3.04E-07 6.517798533 0.058805902 TSPVTASDPAGPSYAAATLQASSAASS(ph)ASPVSR ddPTM_A459_MK2206_30min_R2 1 TSPVTASDPAGPSYAAATLQASSAASSASPVSR 33 0 F5H8D7;P18887;M0QYS5;M0R1U8 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TSPVTASDPAGPSYAAATLQASSAAS(0.04)S(0.687)AS(0.193)PVS(0.079)R 94.028 8.26E-10 10226000 36284 32852 38690 38703 34313 38051 50275 31838 38508 44109 TRUE FALSE 39061.93094 31220.61745 39979.90529 35540.8411 32965.69921 39499.05747 43673.83211 35999.33592 41857.35623 42669.72694 0.915448346 0.731680742 0.936961826 0.832928721 0.772578162 0.925692764 1.023532027 0.843673923 0.980961427 1 15.38092526 -6.924607688 7.260621019 0.952579097 0.83766874 0.403939993 0.071673954 0.239793151 19.37387428 0.02435877 0.021461528 1.19E-07 6.924607688 -0.114910357 TSPVTASDPAGPSYAAATLQASSAASSAS(ph)PVSR ddPTM_A459_MK2206_30min_R1 1 TSPVTASDPAGPSYAAATLQASSAASSASPVSR 33 0 F5H8D7;P18887;M0QYS5;M0R1U8 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TSPVTASDPAGPSYAAATLQASSAAS(0.012)S(0.086)AS(0.664)PVS(0.238)R 138.21 1.02E-25 12630000 4078.1 3693.6 3696.7 2944.8 3478.1 3156.4 3855.4 3535.1 3456.1 3146.8 TRUE FALSE 3731.23618 3453.145969 3445.778304 3171.609006 3339.559912 3335.11264 3598.213301 3504.192993 3815.373963 3536.649341 1.055020111 0.976389129 0.974305896 0.896783566 0.944272273 0.943014791 1.017407425 0.990822854 1.078810364 1 11.78816747 -7.279650123 19.05197332 1.020995672 0.961868591 0.291730734 0.043186256 52.33551806 54749.65689 0.018811942 0.012753217 5.25E-08 7.279650123 -0.059127081 TSPVTASDPAGPSYAAATLQASSAASSAS(ph)PVSR ddPTM_A459_MK2206_30min_R2 3 TSPVTASDPAGPSYAAATLQASSAASSASPVSR 33 0 F5H8D7;P18887;M0QYS5;M0R1U8 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TSPVTASDPAGPSYAAATLQASSAASS(0.01)AS(0.717)PVS(0.272)R;TSPVTASDPAGPSYAAATLQASSAAS(0.009)S(0.299)AS(0.506)PVS(0.186)R;TSPVTASDPAGPSYAAATLQASSAAS(0.035)S(0.331)AS(0.479)PVS(0.155)R 173.97 9.54E-36 16776500 108297 125973 109838 137223 136942 118566 133705 105272 106520 128967 TRUE FALSE 116588.3016 119717.364 113499.9441 126011.4419 131564.969 123078.1122 116149.3729 119031.4119 115784.9171 124758.8174 0.934509513 0.959590404 0.90975489 1.010040369 1.054554474 0.986528366 0.930991295 0.954092179 0.928070012 1 16.92878226 -5.759229338 24.9999937 0.979958182 0.937115486 0.240838488 0.037328402 103.2324287 1167734.864 0.011600634 0.018886989 1.74E-06 5.759229338 -0.042842696 TSQCSSPSLSASPGS(ph)PTRPQIR ddPTM_A459_MK2206_30min_R2 1 TSQCSSPSLSASPGSPTRPQIR 22 1 P37275-3;P37275-4;P37275-5;P37275;P37275-2;H0YMD3;H0YND9 P37275-3 ZEB1 Zinc finger E-box-binding homeobox 1 1 TSQCSSPSLSAS(0.001)PGS(0.563)PT(0.436)RPQIR 116.99 1.83E-05 64188000 25421 20608 19465 24149 21626 21410 34201 22506 21369 29755 TRUE FALSE 27367.25131 19584.63669 20113.95338 22175.94945 20776.85458 22224.77255 29710.36762 25447.61147 23227.63699 28784.09679 0.950776796 0.680397819 0.698787026 0.770423669 0.721817145 0.772119852 1.032179951 0.884085808 0.806960773 1 14.81298432 -7.132732339 7.618290557 0.920735958 0.755634403 0.442642679 0.090204447 0.260152192 14.89919417 0.03411262 0.026408943 7.37E-08 7.132732339 -0.165101555 TSQCSSPSLSASPGSPT(ph)RPQIR ddPTM_A459_MK2206_30min_R1 3 TSQCSSPSLSASPGSPTRPQIR 22 1 P37275-3;P37275-4;P37275-5;P37275;P37275-2;H0YMD3;H0YND9 P37275-3 ZEB1 Zinc finger E-box-binding homeobox 1 1 TSQCSSPSLSASPGS(0.06)PT(0.94)RPQIR;TSQCSSPSLS(0.001)AS(0.005)PGS(0.288)PT(0.706)RPQIR;TSQCSSPSLSAS(0.006)PGS(0.184)PT(0.81)RPQIR 122.3 4.50E-05 45730000 3706.1 3765.3 3944.2 3540.48 3643.18 3819.8 3194.06 3526.8 3300.33 3076.54 TRUE FALSE 3390.876733 3520.178286 3676.478693 3813.168383 3498.064426 4036.073775 2980.990085 3495.965559 3643.411114 3457.685002 0.980678324 1.018073735 1.063277508 1.102809649 1.011678167 1.167276306 0.862134661 1.011071152 1.053714006 1 11.75559073 -7.257129118 24.99410466 0.982652554 1.055782727 0.235691534 0.06662524 594.3176655 3446311.193 0.026056039 0.019461009 5.53E-08 7.257129118 0.073130172 TSQCSSPSLSASPGSPT(ph)RPQIR ddPTM_A459_MK2206_30min_R2 2 TSQCSSPSLSASPGSPTRPQIR 22 1 P37275-3;P37275-4;P37275-5;P37275;P37275-2;H0YMD3;H0YND9 P37275-3 ZEB1 Zinc finger E-box-binding homeobox 1 1 TSQCSSPSLSASPGS(0.176)PT(0.824)RPQIR;TSQCSSPSLSASPGS(0.154)PT(0.846)RPQIR 114.46 4.75E-05 66755700 21865.6 29414.3 28099.7 34699.3 32115.1 24562.6 28453.4 25005.8 21794.5 36430.9 TRUE FALSE 23539.64715 27953.62863 29036.52997 31864.25619 30854.09981 25497.34695 24717.4344 28274.14392 23690.14621 35242.16272 0.667939914 0.793187094 0.823914531 0.904151554 0.875488263 0.723489848 0.701359749 0.802281748 0.672210341 1 15.10501484 -6.773879726 24.99118088 0.762604171 0.817516523 0.010701339 0.102594018 721.915964 1450235.279 0.035385871 0.031423781 1.68E-07 6.773879726 0.054912352 TSQEELLAEVVQGQS(ph)RTPR ddPTM_A459_MK2206_30min_R2 1 TSQEELLAEVVQGQSRTPR 19 1 Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4;G3V5I6;A0A087WTC9;Q6PJT7-9;Q6PJT7-2;H0YJA2;Q6PJT7-3;Q6PJT7-11 Q6PJT7-5;Q6PJT7-9 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 TSQEELLAEVVQGQS(0.5)RT(0.5)PR 71.601 0.0077607 2013800 5134.2 11189 7851.5 10300 10153 8844.2 8531.7 6037 9247.5 7089.9 TRUE FALSE 5527.2783 10633.37053 8113.265091 9458.457052 9754.342205 9180.772228 7411.477542 6826.056628 10051.83083 6858.557144 0.805895203 1.550380103 1.182940511 1.379073886 1.422214906 1.338586533 1.080617597 0.995261319 1.465589719 1 12.74368939 -7.258309458 24.60707371 1.134972269 1.298721948 0.088674911 0.222015878 503.5280673 3958699.266 0.083239924 0.061672251 5.52E-08 7.258309458 0.16374968 TSQEELLAEVVQGQSRT(ph)PR ddPTM_A459_MK2206_30min_R1 2 TSQEELLAEVVQGQSRTPR 19 1 Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4;G3V5I6;A0A087WTC9;Q6PJT7-9;Q6PJT7-2;H0YJA2;Q6PJT7-3;Q6PJT7-11 Q6PJT7-5;Q6PJT7-9 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 TSQEELLAEVVQGQS(0.04)RT(0.96)PR;TSQEELLAEVVQGQS(0.065)RT(0.935)PR 110.53 0.0009024 9652500 2302 2237.13 1898.62 2190.81 2246.99 2026.99 2045.46 1940.04 1807.15 1640.33 TRUE FALSE 2106.202812 2091.49243 1769.746964 2359.546566 2157.48763 2141.756422 1909.011096 1923.078435 1995.009709 1843.546464 1.142473408 1.134494015 0.959968733 1.27989536 1.170291974 1.161758851 1.035510161 1.043140746 1.082158626 1 10.84826806 -7.266236361 24.40446693 1.043797438 1.140513506 0.301643205 0.075406115 421.3907228 2143795.711 0.031803333 0.022242947 5.42E-08 7.266236361 0.096716068 TSQEGSS(ph)DDAER ddPTM_A459_MK2206_30min_R2 2 TSQEGSSDDAER 12 0 P46100-4;P46100;P46100-5;P46100-3;P46100-2;P46100-6;A0A096LNL9;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 TS(0.001)QEGS(0.329)S(0.67)DDAER;TSQEGS(0.344)S(0.656)DDAER 110.22 0.007312 10719800 3479.53 1269.1 3103.5 1834.1 3634.43 3177.69 3941.87 3742.99 3996.3 4536.1 TRUE FALSE 3745.925492 1206.078339 3206.969141 1684.248163 3491.724017 3298.61922 3424.297734 4232.211645 4343.89095 4388.087428 0.853657898 0.274852851 0.730835288 0.383822836 0.795727996 0.751721399 0.78036224 0.964477512 0.989928077 1 12.09937656 -7.177878564 0.822459378 1.009552879 0.553086696 0.504826235 0.163518829 0.483438821 0.651810703 0.119552054 0.076611475 6.64E-08 7.177878564 -0.456466182 TSQLGDS(ph)PFYPGK ddPTM_A459_MK2206_30min_R1 1 TSQLGDSPFYPGK 13 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 TSQLGDS(1)PFYPGK 159.34 0.00036432 9433800 4072.8 4027 3867.7 3284.6 3582.4 3179.9 3674.2 3304.1 3418.9 2727.2 TRUE FALSE 3726.386973 3764.841568 3605.1713 3537.580461 3439.705422 3359.94319 3429.100822 3275.212602 3774.30689 3065.066125 1.215760711 1.228306801 1.176213221 1.154161221 1.122228781 1.096205776 1.118768954 1.068561809 1.231394931 1 11.58170248 -1.522878745 0.084709027 0.936550045 1.711251626 0.513419985 0.049706313 143.9326183 0.886631931 1.144402131 12.99383454 0.03 1.522878745 0.774701581 TSQLGDS(ph)PFYPGK ddPTM_A459_MK2206_30min_R2 2 TSQLGDSPFYPGK 13 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 T(0.002)SQLGDS(0.998)PFYPGK;TSQLGDS(1)PFYPGK 157.35 0.00036495 36353000 135459 127041 123703 144281 141448 107786 147527 108553 95269 138877 TRUE FALSE 145829.8452 120732.3287 127827.1963 132492.7808 135894.0408 111887.8718 128156.5277 122741.2498 103555.3254 134345.4549 1.085484026 0.898670735 0.951481361 0.986209626 1.011526895 0.832837046 0.953932739 0.913624134 0.770813762 1 17.03558799 -6.749872252 24.9998181 0.892573739 0.979804429 0.282017497 0.073309495 311.2613253 672722.1597 0.02356064 0.023369427 1.78E-07 6.749872252 0.08723069 TSQVGAASAPAKES(ph)PR ddPTM_A459_MK2206_30min_R1 6 TSQVGAASAPAKESPR 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR 224.12 1.33E-10 2523616800 41259.9 45244 45019.4 40442.4 36434.4 34977.4 38451.9 39924.4 37332.1 35315.1 TRUE FALSE 37750.52884 42298.60738 41963.60856 43557.28066 34983.1407 36957.79016 35886.84391 39575.34518 41212.90539 39690.2012 0.951129692 1.065719147 1.057278807 1.097431591 0.881404972 0.931156533 0.904173897 0.997106187 1.038364738 1 15.27649526 -4.416522291 12.63736371 0.994216621 4.09E-05 0.03768311 0.068223438 651871.7996 1467512.688 0.018767504 17699329.12 3.83E-05 4.416522291 -0.994175735 TSQVGAASAPAKES(ph)PR ddPTM_A459_MK2206_30min_R2 7 TSQVGAASAPAKESPR 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAAS(0.02)APAKES(0.98)PR;T(0.004)S(0.013)QVGAAS(0.024)APAKES(0.959)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR 204.51 1.11E-06 1773800000 790600 875408 803578 774819 863319 647488 959281 721588 674745 819921 TRUE FALSE 851128.9439 831936.5117 830368.8894 711513.8092 829420.7582 672128.6096 833326.2524 815902.0292 733433.1004 793167.0449 1.073076535 1.048879321 1.046902913 0.897054175 1.045707539 0.847398557 1.050631462 1.028663551 0.924689326 1 19.59726521 -5.557445391 24.15381377 0.973030388 1.05770625 0.282550236 0.062716078 153.8096142 107475.2955 0.01639772 0.028401924 2.77E-06 5.557445391 0.084675862 TSQVGAASAPAKES(ph)PRK ddPTM_A459_MK2206_30min_R2 1 TSQVGAASAPAKESPRK 17 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 TSQVGAASAPAKES(1)PRK 72.523 0.01065 31278000 72411 76404 72620 66602 85131 43616 73049 54161 66864 57709 TRUE FALSE 77954.84183 72609.88846 75041.11455 61160.40355 81788.32919 45275.83744 63457.57855 61240.02866 72679.70986 55825.96006 1.396390528 1.300647376 1.344197475 1.09555489 1.465059071 0.811017623 1.136703757 1.0969812 1.301898074 1 15.76864854 -6.02207813 0.977364928 1.101303648 1.363303069 0.275483698 0.162997237 0.822092283 1.600650847 0.069079418 0.145722712 9.50E-07 6.02207813 0.261999421 TSRPENAIIYNNNEDFQVGQAK ddPTM_A459_MK2206_30min_R1 2 TSRPENAIIYNNNEDFQVGQAK 22 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 222.13 7.55E-26 35312000 5757.1 6020.9 6695.4 6043.9 5417.5 5530.3 5712.6 5780.6 5394.8 4993.9 FALSE TRUE 5267.428413 5628.938316 6240.934902 6509.402225 5201.709503 5843.420807 5331.522877 5730.060824 5955.608765 5612.582034 0.938503594 1.002914217 1.111954331 1.159787454 0.926794383 1.041128802 0.949923377 1.020931327 1.061117455 1 12.45444891 -6.285675539 24.98456245 1.000583491 1.053881999 0.133528257 0.066507293 1754.304766 1808470.478 0.021827849 0.024760609 5.18E-07 6.285675539 0.053298508 TSRPENAIIYNNNEDFQVGQAK ddPTM_A459_MK2206_30min_R2 1 TSRPENAIIYNNNEDFQVGQAK 22 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 136.96 4.11E-05 9426600 22673 29053 28555 30184 30489 26541 31230 24760 24565 31161 FALSE TRUE 24408.86231 27610.27027 29507.00945 27717.87065 29291.84867 27551.03635 27129.46349 27996.21701 26701.6193 30144.21912 0.809736096 0.915939144 0.978861298 0.919508664 0.971723585 0.913974127 0.899988929 0.928742486 0.885795687 1 14.87959374 -4.776637058 4.225044729 0.933998367 0.799535071 0.546758248 0.034551355 0.1591051 5.723626254 0.008404862 0.06474579 1.67E-05 4.776637058 -0.134463296 TSRVTDAS(ph)ISMES(ph)LKGTGDS(ph)VDEQNSCR ddPTM_A459_MK2206_30min_R1 1 TSRVTDASISMESLKGTGDSVDEQNSCR 28 2 K7EJ61;Q86T90-2;Q86T90 K7EJ61 KIAA1328 Uncharacterized protein KIAA1328 3 T(0.017)S(0.017)RVT(0.129)DAS(0.524)IS(0.5)MES(0.755)LKGT(0.32)GDS(0.73)VDEQNS(0.007)CR 47.38 0.027899 10430000 1170.8 906.7 1086.4 969.44 936.02 1044.7 1106.3 958.52 1079.8 1402.1 TRUE FALSE 1071.217312 847.6736652 1012.658195 1044.106437 898.7363413 1103.850011 1032.500746 950.1397607 1192.049074 1575.802733 0.679791505 0.537931333 0.642630054 0.66258702 0.570335564 0.700500125 0.655222081 0.60295603 0.756471003 1 10.62187123 -8.622886685 2.744015761 0.999802849 0.631043003 0.849159276 0.047427215 0.142041493 2.404787351 0.044523735 0.011939915 2.38E-09 8.622886685 -0.368759846 TSS(ph)AELSTSAPDEPLLQK ddPTM_A459_MK2206_30min_R1 4 TSSAELSTSAPDEPLLQK 18 0 Q15139 Q15139 PRKD1 Serine/threonine-protein kinase D1 1 T(0.218)S(0.034)S(0.748)AELSTSAPDEPLLQK;T(0.001)S(0.005)S(0.995)AELSTSAPDEPLLQK;T(0.002)S(0.014)S(0.985)AELSTSAPDEPLLQK;T(0.043)S(0.007)S(0.949)AELSTSAPDEPLLQK 359.1 5.05E-206 16414300 5796.9 5024.48 4822.65 4176.34 4835.51 4571.45 5328.63 4827.5 4996.5 4811.63 TRUE FALSE 5303.843214 4697.385439 4495.301955 4498.00243 4642.901397 4830.281548 4973.166815 4785.293676 5515.904055 5407.73105 0.980789016 0.868642578 0.831273211 0.831772584 0.858567365 0.893217785 0.919640191 0.884898608 1.0200034 1 12.40080769 -8.257153383 22.88035837 1.010001731 0.880317244 0.594198508 0.041712838 73.00728005 389761.2514 0.03248372 0.011247486 5.53E-09 8.257153383 -0.129684486 TSS(ph)AELSTSAPDEPLLQK ddPTM_A459_MK2206_30min_R2 2 TSSAELSTSAPDEPLLQK 18 0 Q15139 Q15139 PRKD1 Serine/threonine-protein kinase D1 1 T(0.062)S(0.011)S(0.927)AELSTSAPDEPLLQK;T(0.355)S(0.065)S(0.579)AELS(0.001)TSAPDEPLLQK 196.45 2.66E-10 12992600 71629 71649 70152 68944 56885 45519 76245 54857 50990 66190 TRUE FALSE 77112.97131 68091.01485 72490.83267 63311.05466 54651.40908 47251.25744 66233.93991 62026.99825 55425.01803 64030.22572 1.204321404 1.063419878 1.132134579 0.988768257 0.853525167 0.73795238 1.03441678 0.968714346 0.865607101 1 15.96646548 -5.904508088 3.339438436 0.906518072 1.127572507 0.577526887 0.085099961 0.182827773 4.038951198 0.026026909 0.040634508 1.25E-06 5.904508088 0.221054434 TSS(ph)DPVLLK ddPTM_A459_MK2206_30min_R1 2 TSSDPVLLK 9 0 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 T(0.296)S(0.043)S(0.661)DPVLLK;T(0.003)S(0.019)S(0.979)DPVLLK 146.11 0.0017804 26177000 17970.6 19612.8 19611 17070.2 16935.1 14885.1 17226.9 16503.1 16652.4 16110 TRUE FALSE 16442.1061 18336.00316 18279.85996 18384.94976 16260.53911 15727.8815 16077.72493 16358.81514 18383.47657 18105.82842 0.908111229 1.012712742 1.009611907 1.015416104 0.898083132 0.868664009 0.887986153 0.903511 1.015334739 1 14.14416657 -4.461867652 15.5272316 0.95111971 0.527277677 0.051813176 0.058074241 1112672.955 7163199.362 0.016071606 14767297.65 3.45E-05 4.461867652 -0.423842033 TSS(ph)DPVLLK ddPTM_A459_MK2206_30min_R2 3 TSSDPVLLK 9 0 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 T(0.035)S(0.035)S(0.931)DPVLLK;TS(0.002)S(0.998)DPVLLK;T(0.017)S(0.004)S(0.98)DPVLLK 164.66 0.00097838 56105700 434614 517888 479056 524308 514292 403251 596571 431774 421671 517196 TRUE FALSE 467888.382 492170.435 495027.4879 481470.3592 494098.312 418596.9994 518240.5111 488208.3443 458347.1814 500319.9369 0.935178368 0.983711419 0.989421871 0.962324952 0.987564707 0.836658643 1.035818229 0.975792305 0.916108169 1 18.93249142 -10.63749558 4.317547149 1.000005047 0.959971415 0.056372955 0.050936829 70668516.57 1.449200969 4230.183134 0.012004726 2.30E-11 10.63749558 -0.040033632 TSS(ph)EASMDAAYLDK ddPTM_A459_MK2206_30min_R2 1 TSSEASMDAAYLDK 14 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 T(0.027)S(0.027)S(0.945)EASMDAAYLDK 160.87 0.00028748 5342300 29815 26781 27369 27085 30535 31909 49840 39979 44237 60464 TRUE FALSE 32097.65932 25451.09448 28281.4688 24872.06886 29336.04247 33123.31935 43295.94813 45204.39257 48084.6543 58491.06463 0.548761756 0.435127906 0.483517764 0.42522852 0.501547419 0.566297084 0.740214739 0.772842704 0.822085469 1 15.83592863 -7.68651221 0.728031469 0.971069333 0.456340544 0.94001614 0.044818131 0.148849844 0.151105768 0.041970406 0.020868923 2.06E-08 7.68651221 -0.514728789 TSS(ph)EDNLYLAVLR ddPTM_A459_MK2206_30min_R1 9 TSSEDNLYLAVLR 13 0 Q15149-4 Q15149-4 PLEC Plectin 1 T(0.103)S(0.152)S(0.745)EDNLYLAVLR;T(0.121)S(0.121)S(0.758)EDNLYLAVLR;T(0.01)S(0.002)S(0.988)EDNLYLAVLR;T(0.239)S(0.239)S(0.523)EDNLYLAVLR;T(0.286)S(0.043)S(0.671)EDNLYLAVLR;T(0.004)S(0.007)S(0.989)EDNLYLAVLR;T(0.201)S(0.017)S(0.781)EDNLYLAVLR;T(0.012)S(0.283)S(0.706)EDNLYLAVLR;T(0.068)S(0.068)S(0.865)EDNLYLAVLR 263.98 4.32E-30 2733166000 31422.44 36217.91 32603.47 28682.92 29002.07 26974.63 30712.62 29956.75 29905.34 28477.93 TRUE FALSE 28749.79647 33860.11748 30390.43729 30892.08347 27846.85614 28501.91024 28663.83716 29694.84129 33014.10711 32005.99097 0.898262969 1.057930608 0.949523398 0.965196906 0.870051365 0.890517974 0.895577243 0.927790092 1.031497733 1 14.96605436 -8.256968097 24.64001247 1.015748871 0.933111637 0.303468966 0.050810469 391.6857197 2158508.787 0.039912951 0.013942981 5.53E-09 8.256968097 -0.082637234 TSS(ph)EDNLYLAVLR ddPTM_A459_MK2206_30min_R2 11 TSSEDNLYLAVLR 13 0 Q15149-4 Q15149-4 PLEC Plectin 1 T(0.004)S(0.066)S(0.93)EDNLYLAVLR;T(0.015)S(0.242)S(0.744)EDNLYLAVLR;T(0.422)S(0.042)S(0.536)EDNLYLAVLR;T(0.047)S(0.081)S(0.872)EDNLYLAVLR;T(0.379)S(0.087)S(0.534)EDNLYLAVLR;T(0.011)S(0.002)S(0.988)EDNLYLAVLR;T(0.007)S(0.161)S(0.833)EDNLYLAVLR;T(0.331)S(0.052)S(0.617)EDNLYLAVLR;TS(0.016)S(0.984)EDNLYLAVLR;T(0.001)S(0.056)S(0.944)EDNLYLAVLR;T(0.005)S(0.005)S(0.991)EDNLYLAVLR 243.92 3.33E-18 590900700 1703484.8 1965971.8 1845258.6 1905063.2 1996230.7 1613538.4 2074281.8 1575011.9 1652741.9 1976703.5 TRUE FALSE 1833904.906 1868344.499 1906778.601 1749413.443 1917848.652 1674942.734 1801926.108 1780871.363 1796494.403 1912203.827 0.959053047 0.977063466 0.997162841 0.914867661 1.002952 0.875922698 0.942329517 0.931318795 0.93948897 1 20.86680488 -5.755575046 24.99056597 0.940548414 0.97769015 0.151757238 0.036167786 238.3931978 1015888.313 0.00942932 0.015783153 1.76E-06 5.755575046 0.037141737 TSS(ph)EEEDSRREEPSLLLVLK ddPTM_A459_MK2206_30min_R1 1 TSSEEEDSRREEPSLLLVLK 20 2 A0A087WZV0;O43314;O43314-2;D6RBU4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 T(0.23)S(0.147)S(0.564)EEEDS(0.054)RREEPS(0.005)LLLVLK 43.261 0.047436 6394500 2082.3 2385.3 2149.4 2049 1683 1986.9 1919.7 2168.5 1797.4 1659.4 TRUE FALSE 1905.18945 2230.016536 2003.504717 2206.814335 1615.962546 2099.396561 1791.640316 2149.541033 1984.246162 1864.979 1.021560806 1.195732787 1.07427736 1.183291788 0.86647761 1.125694478 0.960675866 1.152581897 1.063950941 1 10.86494367 TSS(ph)FAEPGGGGGGGGGGPGGSASGPGGTGGGK ddPTM_A459_MK2206_30min_R1 1 TSSFAEPGGGGGGGGGGPGGSASGPGGTGGGK 32 0 P49840 P49840 GSK3A Glycogen synthase kinase-3 alpha 1 T(0.25)S(0.25)S(0.5)FAEPGGGGGGGGGGPGGSASGPGGTGGGK 149.04 9.44E-21 8409500 3333.2 3341.8 3426.2 3141.4 3802.4 4997.1 6082.3 6542.2 7296.9 7487.3 TRUE FALSE 3049.693837 3124.248213 3193.63909 3383.351172 3650.942356 5280.031484 5676.560865 6485.002235 8055.438867 8414.88325 0.362416655 0.371276478 0.379522686 0.402067512 0.433867262 0.627463427 0.674585814 0.770658611 0.957284686 1 13.03872754 -7.475159525 0.678762365 1.012316639 0.351593758 0.980817817 0.03239824 0.088062523 0.079101229 0.029324236 0.017159626 3.35E-08 7.475159525 -0.660722881 down TSS(ph)FTEQLDEGTPNR ddPTM_A459_MK2206_30min_R1 2 TSSFTEQLDEGTPNR 15 0 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71;C9J0Y3;C9JHJ5 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 T(0.034)S(0.064)S(0.893)FT(0.009)EQLDEGTPNR;TS(0.003)S(0.66)FT(0.337)EQLDEGTPNR 287.54 4.72E-67 151408000 5732.5 6295.3 6119.2 4757.4 6464.5 6956.2 8725.9 7642.9 8938.6 8956.1 TRUE FALSE 5244.920772 5885.474826 5703.845753 5123.815772 6207.005276 7350.054033 8143.811132 7576.078931 9867.799457 10065.64928 0.521071282 0.58470891 0.566664464 0.509039768 0.61665225 0.730211616 0.809069629 0.75266669 0.980344057 1 13.29715262 -7.494253761 0.614886916 1.003572904 0.52907958 0.917141959 0.049034256 0.210004603 0.159981154 0.04666672 0.02943942 3.20E-08 7.494253761 -0.474493325 TSS(ph)FTEQLDEGTPNR ddPTM_A459_MK2206_30min_R2 2 TSSFTEQLDEGTPNR 15 0 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71;C9J0Y3;C9JHJ5 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 TS(0.001)S(0.769)FT(0.23)EQLDEGTPNR;TS(0.019)S(0.751)FT(0.229)EQLDEGTPNR 284.53 1.24E-55 62200000 34993 29911 33708 30779 33202 35578 37427 30411 34016 37638 TRUE FALSE 37672.09099 28425.66323 34831.8079 28264.25724 31898.32265 36931.94572 32512.78994 34385.82212 36974.65019 36409.87514 1.034666854 0.780713011 0.956658263 0.776279983 0.876089867 1.014338708 0.892966258 0.944409229 1.01551159 1 15.15204217 -6.739302687 24.32560702 0.964940793 0.877048569 0.232722678 0.079022519 256.7348199 282120.1061 0.024769339 0.024747408 1.82E-07 6.739302687 -0.087892224 TSS(ph)GLGGSTTDFLEEWK ddPTM_A459_MK2206_30min_R1 1 TSSGLGGSTTDFLEEWK 17 0 Q96IZ0;A0A0B4J260;F8W1M8 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 T(0.031)S(0.023)S(0.945)GLGGSTTDFLEEWK 158.45 3.61E-05 3874600 2073.1 2613.8 2455.5 2134.2 2206.5 1936.1 2303.8 2497 1937.9 2077.4 TRUE FALSE 1896.771959 2443.641145 2288.827501 2298.576454 2118.610433 2045.720309 2150.117706 2475.168992 2139.35164 2334.763996 0.81240415 1.046633043 0.980324995 0.984500557 0.907419524 0.876200041 0.920914366 1.060136698 0.916303166 1 11.18906101 TSS(ph)GLGGSTTDFLEEWK ddPTM_A459_MK2206_30min_R2 2 TSSGLGGSTTDFLEEWK 17 0 Q96IZ0;A0A0B4J260;F8W1M8 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 T(0.026)S(0.013)S(0.622)GLGGS(0.113)T(0.113)T(0.113)DFLEEWK;T(0.218)S(0.161)S(0.62)GLGGSTTDFLEEWK 112.67 0.0024181 1445100 9417.6 10866.3 10894.8 9512 9793.4 9218 13473.3 8960.8 7294.3 9851.1 TRUE FALSE 10138.6187 10326.69534 11258.02719 8734.839173 9408.861908 9568.797449 11704.23953 10132.00733 7928.745029 9529.659414 1.063901474 1.083637399 1.181367214 0.916595105 0.987324048 1.004106971 1.228190748 1.063207706 0.832007177 1 13.21820894 -1.522878745 0.115684984 0.957072621 1.373698964 0.078739889 0.106193941 329.3120278 2.646577198 0.883846186 22.00439366 0.03 1.522878745 0.416626343 TSS(ph)GTSLSAMHSSGSSGK ddPTM_A459_MK2206_30min_R1 1 TSSGTSLSAMHSSGSSGK 18 0 A6NNK5;Q12888;Q12888-3;Q12888-2;M0R142 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 T(0.006)S(0.037)S(0.957)GTSLSAMHSSGSSGK 303.96 2.88E-197 0 746.73 308.48 391.78 334.34 1445 1470.7 1448.2 793.47 340.13 442.82 TRUE FALSE 683.2166923 288.3978959 365.1870652 360.0909247 1387.44259 1553.969763 1351.59322 786.5327754 375.4877307 497.6798847 1.372803509 0.579484735 0.733779034 0.723539238 2.787821314 3.122428313 2.715788325 1.580398966 0.754476406 1 8.959074267 -6.244612528 24.57369756 2.115067778 0.824434375 0.351834832 0.747515971 724.9246289 1058669.12 0.237838267 0.306161869 5.69E-07 6.244612528 -1.290633403 TSS(ph)IADEGTYTLDSILR ddPTM_A459_MK2206_30min_R1 4 TSSIADEGTYTLDSILR 17 0 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3;E7ERV5 A0A087WY00 MYO5A Unconventional myosin-Va 1 TS(0.004)S(0.996)IADEGTYTLDSILR;TS(0.062)S(0.938)IADEGTYTLDSILR;T(0.357)S(0.049)S(0.593)IADEGT(0.001)YTLDSILR;T(0.016)S(0.167)S(0.817)IADEGTYTLDSILR 268.61 1.66E-51 94128200 6324.99 6702.57 7538.25 5394.14 6456.66 5496.09 6731.48 6151.96 6800.89 6599.75 TRUE FALSE 5787.016387 6266.231475 7026.574593 5809.597597 6199.47756 5807.273866 6282.435251 6098.174062 7507.866853 7417.376856 0.780197164 0.844804248 0.947312605 0.78324153 0.835804582 0.782928248 0.846988817 0.822146991 1.01219973 1 12.85669335 -8.262267113 24.9609173 1.006099891 0.832378417 0.697993011 0.046207367 40.26283883 1214044.143 0.037529482 0.011844608 5.47E-09 8.262267113 -0.173721474 TSS(ph)IADEGTYTLDSILR ddPTM_A459_MK2206_30min_R2 7 TSSIADEGTYTLDSILR 17 0 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3;E7ERV5 A0A087WY00 MYO5A Unconventional myosin-Va 1 TS(0.005)S(0.995)IADEGTYTLDSILR;T(0.001)S(0.034)S(0.965)IADEGTYTLDSILR;TS(0.025)S(0.975)IADEGTYTLDSILR;TS(0.024)S(0.976)IADEGTYTLDSILR;T(0.017)S(0.039)S(0.944)IADEGTYTLDSILR;T(0.003)S(0.065)S(0.932)IADEGTYTLDSILR;T(0.024)S(0.038)S(0.938)IADEGTYTLDSILR 313.32 2.35E-103 47765700 110504.5 128364.7 122375.4 131066.3 101230.9 98270.2 102606.1 87934.5 87041.5 90880.9 TRUE FALSE 118964.8095 121990.2957 126455.3348 120357.764 97256.06622 102009.9413 89133.79582 99427.84107 94612.21233 87915.46368 1.353172747 1.387586331 1.4383742 1.369016997 1.106245274 1.160318527 1.013857996 1.130948265 1.076172591 1 16.42382933 -6.260715333 3.770295628 1.084994328 1.395353109 0.904130355 0.048861152 0.064143826 2.064391889 0.014957531 0.018444542 5.49E-07 6.260715333 0.310358781 TSS(ph)LDTITGPYLTGQWPR ddPTM_A459_MK2206_30min_R2 2 TSSLDTITGPYLTGQWPR 18 0 Q86VQ1;H7C2L5;H7C0Q2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 TS(0.03)S(0.97)LDTITGPYLTGQWPR;T(0.083)S(0.057)S(0.86)LDTITGPYLTGQWPR 166.48 1.46E-07 6085200 18508.6 22100.4 15916.7 20946.8 21428.6 18347.7 23216.7 17883.5 14441.4 22705 TRUE FALSE 19925.63265 21002.92627 16447.35483 19235.37943 20587.20549 19045.93458 20168.3194 20220.93485 15697.48687 21964.13771 0.907189388 0.956237233 0.748827705 0.875763014 0.937309981 0.867137824 0.918238616 0.920634132 0.714687145 1 14.42286224 TSS(ph)LDTLAAPYLAGHWPR ddPTM_A459_MK2206_30min_R2 2 TSSLDTLAAPYLAGHWPR 18 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 T(0.034)S(0.007)S(0.959)LDTLAAPYLAGHWPR;T(0.132)S(0.132)S(0.711)LDT(0.025)LAAPYLAGHWPR 219.72 1.58E-14 18704600 42393 43827 41217 47463 43630 40981 43138 40481 33401 45213 TRUE FALSE 45638.64067 41650.61491 42591.15421 43585.12107 41916.86698 42540.56067 37473.92878 45772.00569 36306.1586 43737.70351 1.043462208 0.952281706 0.973785791 0.996511421 0.958369178 0.972629042 0.856787755 1.046511408 0.830088361 1 15.41658985 -6.71267329 2.070091472 0.936644697 0.986571794 0.12620649 0.062867829 0.708127234 6.239305192 0.022920078 0.021781911 1.94E-07 6.71267329 0.049927097 TSS(ph)LTQFPPSQSEER ddPTM_A459_MK2206_30min_R1 9 TSSLTQFPPSQSEER 15 0 Q9H6Z4;Q9H6Z4-3;Q9H6Z4-2;B7Z7F3 Q9H6Z4 RANBP3 Ran-binding protein 3 1 T(0.331)S(0.053)S(0.611)LT(0.005)QFPPSQSEER;TS(0.004)S(0.582)LT(0.402)QFPPS(0.011)QSEER;T(0.006)S(0.031)S(0.897)LT(0.067)QFPPSQSEER;TSS(1)LTQFPPSQSEER;T(0.132)S(0.022)S(0.812)LT(0.034)QFPPSQSEER;TS(0.004)S(0.888)LT(0.108)QFPPSQSEER;T(0.002)S(0.098)S(0.871)LT(0.029)QFPPSQSEER;T(0.244)S(0.244)S(0.502)LT(0.01)QFPPSQSEER;T(0.153)S(0.153)S(0.685)LT(0.008)QFPPSQSEER 225.21 3.10E-10 66717500 18140.6 16487.36 16522.21 12591.77 16379.19 15737.47 20636.1 22890.6 21111.2 20821.3 TRUE FALSE 16597.64671 15414.02987 15400.72842 13561.59031 15726.77218 16628.51195 19259.50342 22690.4699 23305.78479 23400.79984 0.709276898 0.65869671 0.658128292 0.579535332 0.672061309 0.71059588 0.82302757 0.969645057 0.995939667 1 14.51427022 -7.498822487 1.512442052 1.005666696 0.651523339 0.957681465 0.030789653 0.078412876 0.345467731 0.022083146 0.010731322 3.17E-08 7.498822487 -0.354143358 TSS(ph)LTQFPPSQSEER ddPTM_A459_MK2206_30min_R2 11 TSSLTQFPPSQSEER 15 0 Q9H6Z4;Q9H6Z4-3;Q9H6Z4-2;B7Z7F3 Q9H6Z4 RANBP3 Ran-binding protein 3 1 T(0.001)S(0.005)S(0.949)LT(0.046)QFPPSQSEER;T(0.001)S(0.004)S(0.988)LT(0.007)QFPPSQSEER;T(0.133)S(0.078)S(0.789)LTQFPPSQSEER;T(0.004)S(0.091)S(0.613)LT(0.292)QFPPSQSEER;T(0.002)S(0.094)S(0.899)LT(0.005)QFPPSQSEER;TS(0.001)S(0.987)LT(0.012)QFPPSQSEER;T(0.001)S(0.005)S(0.923)LT(0.07)QFPPSQSEER;TSS(0.964)LT(0.036)QFPPSQSEER;TSS(1)LTQFPPSQSEER;TS(0.025)S(0.973)LT(0.002)QFPPSQSEER;TS(0.003)S(0.726)LT(0.271)QFPPSQSEER 301.48 1.15E-80 87546500 428885.6 473866 425776.5 460551 419310 436810 546780 472435 514812 599742 TRUE FALSE 461721.4113 450334.5035 439971.676 422922.5101 402845.7825 453433.1106 474987.1292 534183.8766 559589.4172 580172.4677 0.795834751 0.776207987 0.758346355 0.728959979 0.694355222 0.781548825 0.818699879 0.920732896 0.964522531 1 19.14612231 -7.772137815 1.483606223 0.989652431 0.751193156 0.923946858 0.02689898 0.115152118 0.471753434 0.024271407 0.009369882 1.69E-08 7.772137815 -0.238459275 TSS(ph)PLFNK ddPTM_A459_MK2206_30min_R1 2 TSSPLFNK 8 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 T(0.032)S(0.061)S(0.907)PLFNK;T(0.328)S(0.051)S(0.621)PLFNK 143.37 0.0021556 68910000 13904.2 15253.5 15225.2 12916.9 14670.7 11742.1 14600.6 14577.1 13849.5 13175.9 TRUE FALSE 12721.57478 14260.49438 14191.75584 13911.76188 14086.33495 12406.92755 13626.62061 14449.65395 15289.20509 14808.22996 0.859088143 0.963011407 0.958369493 0.939461496 0.951250419 0.837840011 0.920205902 0.975785356 1.032480257 1 13.85411158 -7.934486053 3.416322011 1.014403204 0.920783542 0.502029234 0.039707145 0.213185681 4.930750542 0.027233276 0.011182298 1.16E-08 7.934486053 -0.093619662 TSS(ph)TCS(ph)NESLSVGGTSVTPR ddPTM_A459_MK2206_30min_R2 1 TSSTCSNESLSVGGTSVTPR 20 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 2 T(0.029)S(0.035)S(0.882)T(0.139)CS(0.913)NES(0.002)LSVGGTSVTPR 124.45 0.0042585 3145800 13841 13795 18206 15035 18036 11927 16545 12544 12877 14142 TRUE FALSE 14900.6776 13109.96036 18812.97895 13806.59241 17327.81602 12380.89034 14372.62163 14183.54387 13997.01818 13680.5477 1.089187212 0.958292069 1.375162703 1.009213426 1.266602507 0.904999611 1.050588174 1.036767254 1.023132881 1 13.73983837 -6.769161934 24.99992892 1.008363723 1.135446779 0.252120893 0.11733972 273.2818754 884679.3737 0.039660953 0.035621411 1.70E-07 6.769161934 0.127083056 TSS(ph)TDEVLSLEEK ddPTM_A459_MK2206_30min_R1 4 TSSTDEVLSLEEK 13 0 K7ENH8;A0A0A0MRB7;P15923-2;K7EMM4 K7ENH8 TCF3 Transcription factor E2-alpha 1 T(0.001)SS(0.999)TDEVLSLEEK;TSS(0.998)T(0.002)DEVLSLEEK;T(0.063)S(0.008)S(0.928)T(0.001)DEVLSLEEK;TS(0.001)S(0.998)T(0.001)DEVLSLEEK 379.37 1.71E-232 29970500 11309.2 11761.2 11498.1 9775.4 7677.3 6341.1 8185.1 8791.2 9337 8243.3 TRUE FALSE 10347.29315 10995.54374 10717.64101 10528.303 7371.496884 6700.127602 7639.086914 8714.339465 10307.61456 9264.542238 1.116870417 1.186841558 1.156845177 1.136408333 0.795667686 0.72320115 0.82455093 0.940611985 1.112587573 1 13.17750398 -6.243446229 19.78735275 0.883911206 1.152470921 0.576672919 0.10433055 41.45516899 45587.50447 0.033582307 0.043145332 5.71E-07 6.243446229 0.268559716 TSS(ph)TDEVLSLEEK ddPTM_A459_MK2206_30min_R2 2 TSSTDEVLSLEEK 13 0 K7ENH8;A0A0A0MRB7;P15923-2;K7EMM4 K7ENH8 TCF3 Transcription factor E2-alpha 1 T(0.002)SS(0.998)TDEVLSLEEK;T(0.013)SS(0.986)T(0.001)DEVLSLEEK 329.38 2.07E-120 17828400 160274 171994 152429 134608 138928 97532 151140 110310 97501 128406 TRUE FALSE 172544.7007 163453.0281 157510.9068 123610.0958 133472.9887 101243.6486 131295.1364 124727.8958 105981.4607 124216.1227 1.389068479 1.315876107 1.268039151 0.995121189 1.074522258 0.815060448 1.056989492 1.004120021 0.853202132 1 16.92249292 -5.685106695 1.669410163 0.960798832 1.370114631 0.810125991 0.078916008 0.152742779 0.855231356 0.023990599 0.056648019 2.06E-06 5.685106695 0.409315798 TSS(ph)TLDSEGTFNSYR ddPTM_A459_MK2206_30min_R2 3 TSSTLDSEGTFNSYR 15 0 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 T(0.064)S(0.064)S(0.868)T(0.005)LDSEGTFNSYR;T(0.31)S(0.044)S(0.565)T(0.08)LDSEGTFNSYR;T(0.002)S(0.072)S(0.734)T(0.192)LDSEGTFNSYR 277.41 5.10E-55 16458700 22581.2 30634.7 44987 61641 63445 79761 93415 62428 62997 64733 TRUE FALSE 24310.03403 29113.42535 46486.84413 56604.73312 60953.83051 82796.36075 81149.49829 70587.55395 68476.36519 62620.76751 0.388210413 0.464916457 0.742355068 0.903929086 0.973380444 1.322186936 1.295887954 1.127222753 1.093508877 1 15.93435357 -5.644299104 1.026094787 1.175937842 0.337949264 0.885832643 0.101692863 0.215002685 0.40552081 0.040721563 0.145690469 2.27E-06 5.644299104 -0.837988578 down TSS(ph)TNEDEDLNPEQK ddPTM_A459_MK2206_30min_R1 1 TSSTNEDEDLNPEQK 15 0 Q99081;Q99081-3;B4DGI9;Q99081-4;Q99081-2;B4DZP2;F5GY10 Q99081 TCF12 Transcription factor 12 1 TSS(0.923)T(0.077)NEDEDLNPEQK 289.59 3.69E-67 20189000 2184.9 2739.8 2670.4 2173.4 1840.6 1638.9 2068.8 2405.5 2830.7 2528.1 TRUE FALSE 1999.062782 2561.438522 2489.140688 2340.795645 1767.285004 1731.693102 1930.794127 2384.468967 3124.961395 2841.300114 0.703573259 0.901502277 0.876056942 0.823846672 0.62199871 0.609472084 0.679546 0.839217566 1.099835029 1 11.47233551 -8.108645623 4.088205301 1.045736951 0.749558096 0.606258069 0.096699172 0.182164351 5.071788285 0.082686189 0.028884392 7.79E-09 8.108645623 -0.296178855 TSS(ph)TNEDEDLNPEQK ddPTM_A459_MK2206_30min_R2 1 TSSTNEDEDLNPEQK 15 0 Q99081;Q99081-3;B4DGI9;Q99081-4;Q99081-2;B4DZP2;F5GY10 Q99081 TCF12 Transcription factor 12 1 TS(0.001)S(0.934)T(0.064)NEDEDLNPEQK 351.46 7.68E-167 49234000 189160 190750 195500 192430 152530 113890 214070 176720 128910 193370 TRUE FALSE 203642.235 181277.6324 202017.8724 176707.8534 146540.9058 118224.1638 185962.3519 199817.9108 140122.3588 187060.3527 1.088644558 0.969086339 1.07996093 0.944656903 0.783388375 0.632010803 0.994130232 1.068200224 0.749075669 1 17.51314429 -5.97836705 5.449746233 0.868038733 1.036061634 0.275933797 0.126363513 0.254929442 22.61750081 0.038417786 0.056057067 1.05E-06 5.97836705 0.168022901 TSS(ph)VLGMSVESAPAVEEEKGEELEQK ddPTM_A459_MK2206_30min_R1 2 TSSVLGMSVESAPAVEEEKGEELEQK 26 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 T(0.184)S(0.039)S(0.777)VLGMSVESAPAVEEEKGEELEQK;T(0.211)S(0.211)S(0.501)VLGMS(0.036)VES(0.04)APAVEEEKGEELEQK 147.64 4.72E-11 11562200 1777.01 2077.68 2277.75 2073.66 1935.21 1502.57 1428.83 2052.88 2054.91 2277.2 TRUE FALSE 1625.865968 1942.422654 2123.142676 2233.373653 1858.126488 1587.644215 1333.515358 2034.931887 2268.525248 2559.316728 0.63527345 0.758961419 0.829574024 0.872644495 0.726024438 0.620339092 0.521043505 0.795107485 0.886379252 1 11.32154298 -8.351574704 2.483429017 0.988649259 0.71757332 0.475964975 0.098579871 0.272810391 3.206248795 0.104949594 0.02920964 4.45E-09 8.351574704 -0.271075939 TSS(ph)VPEYVYNLHLVENDFVGGR ddPTM_A459_MK2206_30min_R1 4 TSSVPEYVYNLHLVENDFVGGR 22 0 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 1 T(0.049)S(0.049)S(0.807)VPEY(0.095)VYNLHLVENDFVGGR;T(0.048)S(0.048)S(0.89)VPEY(0.013)VYNLHLVENDFVGGR;T(0.166)S(0.166)S(0.668)VPEYVYNLHLVENDFVGGR;T(0.115)S(0.115)S(0.769)VPEY(0.001)VYNLHLVENDFVGGR 140.59 4.15E-07 20688700 2795.62 2748.37 2903.77 2712.47 2690.38 2625.02 2128.81 2674.74 2294.15 1879.65 TRUE FALSE 2557.837839 2569.450613 2706.670183 2921.384909 2583.216468 2773.646364 1986.800969 2651.35503 2532.635102 2112.515233 1.21080208 1.216299212 1.281254753 1.382894127 1.222815546 1.312959226 0.940490719 1.255070254 1.198871877 1 11.04474603 -7.208422719 24.99999027 1.119863186 1.272015423 0.424602961 0.097156015 357.369162 168517.3133 0.03698233 0.028646358 6.19E-08 7.208422719 0.152152237 TSS(ph)VPEYVYNLHLVENDFVGGR ddPTM_A459_MK2206_30min_R2 2 TSSVPEYVYNLHLVENDFVGGR 22 0 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 1 T(0.173)S(0.05)S(0.774)VPEY(0.003)VYNLHLVENDFVGGR;T(0.064)S(0.064)S(0.864)VPEY(0.007)VYNLHLVENDFVGGR 115.92 2.22E-05 2775300 8097.1 8571.4 10658 9275.8 8845.3 10117 11824.2 6578.7 13058 8404.1 TRUE FALSE 8717.020202 8145.75674 11013.3324 8517.937468 8497.989078 10502.00952 10271.66834 7438.558678 14193.76124 8129.874905 1.072220705 1.001953515 1.354674276 1.047732907 1.045279193 1.291779965 1.26344728 0.914965945 1.745876954 1 12.98901744 -6.764540231 24.99746545 1.239163981 1.109441248 0.087017997 0.22437087 233.0598928 1878791.744 0.073891156 0.06790997 1.72E-07 6.764540231 -0.129722733 TSS(ph)VVTLEVAK ddPTM_A459_MK2206_30min_R1 1 TSSVVTLEVAK 11 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 T(0.066)S(0.001)S(0.933)VVTLEVAK 225.55 1.54E-06 7002200 3861.8 3988 3859.8 3122.7 3467.2 2700.2 3302.9 3648.5 3404.6 2773.1 TRUE FALSE 3533.333631 3728.380475 3597.80753 3363.210895 3329.094082 2853.082991 3082.569567 3616.601549 3758.520353 3116.652564 1.133695065 1.196277223 1.154381971 1.079109983 1.068163362 0.91543184 0.98906423 1.160412165 1.205947816 1 11.60578162 -5.807745969 2.977195367 1.055194773 1.167970189 0.260852504 0.079314071 0.383025748 6.910158908 0.025811708 0.043682031 1.56E-06 5.807745969 0.112775416 TSS(ph)VVTLEVAK ddPTM_A459_MK2206_30min_R2 2 TSSVVTLEVAK 11 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 TSS(1)VVTLEVAK;T(0.123)S(0.018)S(0.86)VVTLEVAK 205.12 1.75E-05 8886500 75120 92444 85977 78366 92759 73734 92291 69706 77183 80321 TRUE FALSE 80871.24496 87853.36539 88843.43027 71963.24712 89116.81558 76539.99904 80173.08084 78816.81354 83896.23783 77700.13235 1.040812191 1.130672017 1.143414143 0.926166339 1.14693261 0.985069095 1.031826825 1.014371677 1.079743821 1 16.24562944 -5.712566624 24.99999769 1.030437912 1.107536719 0.26102501 0.0603276 152.075681 77790.37638 0.01540246 0.02667777 1.94E-06 5.712566624 0.077098807 TSSAFVGKT(ph)PEASPEPK ddPTM_A459_MK2206_30min_R1 1 TSSAFVGKTPEASPEPK 17 1 A0A087WW66;Q99460-2;Q99460 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 1 TSSAFVGKT(0.985)PEAS(0.015)PEPK 165.16 6.75E-05 0 1300.4 1540.9 1442 1301.5 949.64 886.4 1098.7 1012.9 1243 1194.8 TRUE FALSE 1189.794151 1440.58713 1344.121058 1401.741756 911.8138279 936.587202 1025.407728 1004.044322 1372.214298 1342.820844 0.886040872 1.072806649 1.00096827 1.04387846 0.679028652 0.697477408 0.763622141 0.747712792 1.021889334 1 10.39105112 -6.247400939 24.95091064 0.796900164 1.006061274 0.35627693 0.118106312 769.3622145 1367408.454 0.034618639 0.044469323 5.66E-07 6.247400939 0.20916111 TSSAFVGKTPEAS(ph)PEPK ddPTM_A459_MK2206_30min_R2 1 TSSAFVGKTPEASPEPK 17 1 A0A087WW66;Q99460-2;Q99460 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 1 T(0.001)S(0.001)S(0.001)AFVGKT(0.039)PEAS(0.959)PEPK 58.824 0.036261 10577000 60974 67924 73339 59726 72574 44116 80775 57972 57520 81769 TRUE FALSE 65642.21632 64550.99293 75784.08566 54846.19475 69724.3801 45794.86529 70169.14547 65549.13945 62522.98563 79100.88423 0.829854394 0.816059056 0.958068755 0.693370185 0.88146145 0.578942521 0.887084211 0.828677708 0.790420818 1 16.2714062 -10.98273345 4.409499231 1.000801593 0.806925917 0.248906719 0.100524164 0.000764163 9.36E-05 0.093891674 0.022679436 1.04E-11 10.98273345 -0.193875676 TSSAVST(ph)PSK ddPTM_A459_MK2206_30min_R1 4 TSSAVSTPSK 10 0 Q9P2N5;U3KPZ7 Q9P2N5 RBM27 RNA-binding protein 27 1 T(0.001)SS(0.001)AVS(0.267)T(0.731)PSK;TSSAVS(0.05)T(0.95)PS(0.001)K;TSSAVS(0.334)T(0.636)PS(0.03)K;TSSAVS(0.321)T(0.678)PSK 155.47 0.0012273 39701200 43561.2 44693.5 37030.9 31504.2 28220.2 27290.3 35793.5 32600.3 15862.1 33466.4 TRUE FALSE 39856.09119 41783.94503 34517.34568 33930.65894 27096.12968 28835.4532 33405.78092 32315.27901 17511.02206 37612.47029 1.059650985 1.110906694 0.917710148 0.902111951 0.72040282 0.766646088 0.888157057 0.859163962 0.465564264 1 15.19892344 -5.610454832 1.51770563 0.782368822 1.09509138 0.425167663 0.133765777 0.399076784 1.790736957 0.041379466 0.115460647 2.45E-06 5.610454832 0.312722558 TSSAVST(ph)PSK ddPTM_A459_MK2206_30min_R2 3 TSSAVSTPSK 10 0 Q9P2N5;U3KPZ7 Q9P2N5 RBM27 RNA-binding protein 27 1 T(0.001)SS(0.001)AVS(0.284)T(0.698)PS(0.016)K;TSSAVS(0.033)T(0.965)PS(0.002)K;TSSAVS(0.228)T(0.77)PS(0.002)K 117.25 0.014224 42587000 168515 175629 147986 161610 152315 127503 206883 157114 142886 192619 TRUE FALSE 181416.638 166907.5192 152919.7794 148405.946 146334.3478 132355.216 179719.0136 177649.3393 155313.966 186333.8578 0.973610701 0.895744451 0.820676291 0.796451851 0.785334182 0.710312219 0.964500042 0.953392697 0.8335252 1 17.50753032 -10.96131068 7.708598182 1.000006721 0.856678078 0.206726042 0.082553626 1.03E-05 7.52E-07 0.086570442 0.020995432 1.09E-11 10.96131068 -0.143328643 TSSAVWNS(ph)PPLQGAR ddPTM_A459_MK2206_30min_R1 2 TSSAVWNSPPLQGAR 15 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 T(0.133)S(0.018)S(0.133)AVWNS(0.716)PPLQGAR;T(0.207)S(0.129)S(0.059)AVWNS(0.605)PPLQGAR 137.17 0.00040274 16504900 4292.6 4517 4185.1 3830.7 3863 3814.8 4070.4 4042.1 3915.3 3601.7 TRUE FALSE 3927.491829 4222.942479 3901.027072 4125.741178 3709.12853 4030.790679 3798.871043 4006.760346 4322.309446 4047.905787 0.970252776 1.043241296 0.963714888 1.019228558 0.916308018 0.995771861 0.938478127 0.989835376 1.067789043 1 11.98296 -8.08214883 7.706175297 1.032978536 0.978870721 0.253605143 0.037695141 0.407265727 33.95349003 0.024682252 0.009273221 8.28E-09 8.08214883 -0.054107816 TSSAVWNS(ph)PPLQGAR ddPTM_A459_MK2206_30min_R2 3 TSSAVWNSPPLQGAR 15 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 T(0.012)S(0.012)S(0.002)AVWNS(0.974)PPLQGAR;T(0.004)SSAVWNS(0.996)PPLQGAR;TSS(0.001)AVWNS(0.998)PPLQGAR 119 0.0019592 25366000 108596 102499 98706 86503 99737 87931 111874 79062 88349 114935 TRUE FALSE 116910.1933 97409.04871 101996.8088 79435.42819 95820.82424 91277.27582 97184.80942 89395.67486 96033.43632 111184.6804 1.05149552 0.876101351 0.917363871 0.714445803 0.861816789 0.820951911 0.874084533 0.804028708 0.863729032 1 16.76259849 -4.394777775 1.522245886 0.843778649 1.377024506 0.393689393 0.070722389 2.909786859 2.90582597 0.018525646 3.110120036 4.03E-05 4.394777775 0.533245857 TSSFT(ph)EQLDEGTPNR ddPTM_A459_MK2206_30min_R1 2 TSSFTEQLDEGTPNR 15 0 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71;C9J0Y3;C9JHJ5 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 TSS(0.036)FT(0.964)EQLDEGTPNR;TSS(0.15)FT(0.85)EQLDEGTPNR 302.15 2.37E-80 141915000 4165.5 4372.5 4645.5 3553 4588.4 5151.4 6354.9 5078.2 6373.1 6206.9 TRUE FALSE 3811.202351 4087.849455 4330.176403 3826.652676 4405.634312 5443.067816 5930.976216 5033.801833 7035.606551 6975.857632 0.546341762 0.585999553 0.620737497 0.54855659 0.631554505 0.780272205 0.85021463 0.721603292 1.0085651 1 12.76815488 -7.398040504 0.539273627 1.00612395 0.545316327 0.851115383 0.064168403 0.32486199 0.200173861 0.061828206 0.047136031 4.00E-08 7.398040504 -0.460807623 TSSFT(ph)EQLDEGTPNR ddPTM_A459_MK2206_30min_R2 2 TSSFTEQLDEGTPNR 15 0 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71;C9J0Y3;C9JHJ5 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 TSS(0.119)FT(0.88)EQLDEGTPNR;TSS(0.018)FT(0.981)EQLDEGTPNR 296.44 5.83E-68 268780000 343000 387210 370200 384840 393190 394750 470040 372530 397740 477000 TRUE FALSE 369260.3437 367981.7145 382542.2832 353397.341 377751.385 409772.4879 408323.1834 421220.9501 432334.7063 461435.5291 0.800242548 0.797471567 0.829026503 0.765865042 0.818643908 0.888038441 0.884897581 0.912848976 0.936934152 1 18.81576957 -7.617865978 0.549168203 0.995358131 0.789305112 0.910087301 0.020907053 0.241066351 0.156115534 0.021673985 0.014347064 2.41E-08 7.617865978 -0.206053019 TSSGDPPS(ph)PLVK ddPTM_A459_MK2206_30min_R1 2 TSSGDPPSPLVK 12 0 F5GX58;F8WDL1;Q99618 F5GX58 CDCA3 Cell division cycle-associated protein 3 1 TS(0.001)S(0.01)GDPPS(0.988)PLVK;TSSGDPPS(1)PLVK 147.52 0.00062738 59460000 22528.1 20142.5 18565.6 16896.1 15988.8 14250.5 16244.7 16190.1 16808.7 16066 TRUE FALSE 20611.9668 18831.21959 17305.4188 18197.44055 15351.93224 15057.35099 15161.0457 16048.55166 18556.02452 18056.37737 1.141533895 1.042912385 0.958410341 1.007812374 0.850222164 0.833907637 0.839650468 0.888802407 1.027671505 1 14.14022086 -4.974834605 0.958639384 0.900802062 1.217812724 0.530308842 0.067076679 1.213955963 1.093479565 0.024314832 0.374563064 1.06E-05 4.974834605 0.317010662 TSSGDPPS(ph)PLVK ddPTM_A459_MK2206_30min_R2 4 TSSGDPPSPLVK 12 0 F5GX58;F8WDL1;Q99618 F5GX58 CDCA3 Cell division cycle-associated protein 3 1 TSSGDPPS(1)PLVK;TSS(0.002)GDPPS(0.998)PLVK;TSSGDPPS(1)PLVK;TSS(0.003)GDPPS(0.997)PLVK 135.04 0.001523 78430000 1021460 883030 863570 754000 813730 650780 976830 647070 723150 870700 TRUE FALSE 1099663.763 839180.0142 892360.9928 692395.7881 781778.8715 675545.8889 848571.0476 731644.2707 786048.2798 842289.1303 1.305565658 0.996308731 1.059447357 0.822040512 0.928159753 0.802035625 1.007458148 0.868637911 0.933228569 1 19.68395602 -2.483030471 0.933173286 0.908721552 32.87616784 0.696543231 0.075336078 73.96262942 1.056464221 0.023265394 4870.604749 0.003288286 2.483030471 31.96744629 TSSGLGGS(ph)TTDFLEEWK ddPTM_A459_MK2206_30min_R2 1 TSSGLGGSTTDFLEEWK 17 0 Q96IZ0;A0A0B4J260;F8W1M8 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 T(0.009)S(0.005)S(0.101)GLGGS(0.743)T(0.122)T(0.021)DFLEEWK 72.496 0.027275 1295400 3890.8 5214.3 5374.9 4991.5 6091.6 3781.1 5254.4 4465.9 3383.2 4663.7 TRUE FALSE 4188.68264 4955.365444 5554.096483 4583.678483 5852.413176 3924.99241 4564.490968 5049.608464 3677.464621 4511.523851 0.928440761 1.098379529 1.231091016 1.015993406 1.297214283 0.86999261 1.011740405 1.119268928 0.815126938 1 12.1393991 -6.783548991 24.99900189 0.973712294 1.114379072 0.27239234 0.122796703 351.6738128 397629.3671 0.042233502 0.03727527 1.65E-07 6.783548991 0.140666778 TSSIS(ph)GPLSPAYTGQVPYNYNQLEGR ddPTM_A459_MK2206_30min_R1 1 TSSISGPLSPAYTGQVPYNYNQLEGR 26 0 Q01082-3 Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 T(0.104)S(0.104)S(0.104)IS(0.688)GPLSPAYTGQVPYNYNQLEGR 185.27 4.63E-23 14597000 158.73 95.187 259.08 265.04 194.03 115.32 171.64 333.8 163.26 323.9 TRUE FALSE 145.22918 88.990309 241.4943714 285.4534267 186.3013742 121.8493187 160.1902088 330.8816218 180.2314612 364.0271773 0.398951477 0.244460619 0.663396544 0.784154164 0.511778751 0.334725884 0.440050136 0.90894758 0.495104411 1 8.507902352 -14.52287874 0.121716962 2.545782015 0.314098146 0.398273397 0.185227304 170.3276753 1.332980733 64.37449158 1.834330073 3.00E-15 14.52287874 -2.231683868 TSSIS(ph)GPLSPAYTGQVPYNYNQLEGR ddPTM_A459_MK2206_30min_R2 1 TSSISGPLSPAYTGQVPYNYNQLEGR 26 0 Q01082-3 Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 T(0.093)S(0.093)S(0.365)IS(0.449)GPLSPAYTGQVPYNYNQLEGR 128.92 4.27E-09 20095000 9767.9 12817 14745 13038 10663 15174 13634 9339.4 14767 13865 TRUE FALSE 10515.73793 12180.52642 15236.59094 11972.75369 10244.31704 15751.4572 11843.83942 10560.09165 16051.40697 13412.58619 0.784020158 0.908141521 1.135992025 0.892650644 0.763783874 1.174378825 0.883039204 0.78732703 1.196742131 1 13.71129982 -4.857351632 4.177167495 0.96744758 0.782156436 0.139384042 0.145640748 0.438144439 12.55885119 0.035716307 0.196349035 1.39E-05 4.857351632 -0.185291144 TSSISGPLS(ph)PAYTGQVPYNYNQLEGR ddPTM_A459_MK2206_30min_R1 4 TSSISGPLSPAYTGQVPYNYNQLEGR 26 0 Q01082-3 Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 TSS(0.001)IS(0.005)GPLS(0.99)PAY(0.003)T(0.001)GQVPYNYNQLEGR;TSSIS(0.004)GPLS(0.995)PAYTGQVPYNYNQLEGR;TSS(0.001)IS(0.004)GPLS(0.993)PAY(0.001)TGQVPYNYNQLEGR;TSSIS(0.001)GPLS(0.998)PAYTGQVPYNYNQLEGR 131.5 3.77E-09 102834000 33499.1 32663.7 28769.1 22699.4 23041.6 16813.5 16466.9 17148.3 14625.8 12981.4 TRUE FALSE 30649.82563 30537.28719 26816.33365 24447.71172 22123.80428 17765.46584 15368.42315 16998.37422 16146.20425 14589.63384 2.100794713 2.093081124 1.83804021 1.675690562 1.516405725 1.217677293 1.053379634 1.165099441 1.106690163 1 13.83265606 -6.137269926 0.731963157 1.047235422 2.187074211 0.980938214 0.056059911 0.103194431 0.114692917 0.033994953 0.071472853 7.29E-07 6.137269926 1.139838789 up TSSISGPLS(ph)PAYTGQVPYNYNQLEGR ddPTM_A459_MK2206_30min_R2 2 TSSISGPLSPAYTGQVPYNYNQLEGR 26 0 Q01082-3 Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 TSSIS(0.001)GPLS(0.987)PAY(0.011)TGQVPYNYNQLEGR;TSSIS(0.003)GPLS(0.997)PAYTGQVPYNYNQLEGR 113.75 6.93E-09 50566000 341290 420640 321910 331450 276090 228898 214468 176282 174136 178312 TRUE FALSE 367419.4248 399751.6293 332642.3187 304369.4747 265249.3194 237608.8738 186308.094 199322.6627 189282.0345 172493.694 2.130045547 2.317485468 1.928431764 1.764525228 1.537733427 1.377493103 1.080086406 1.155535939 1.097327271 1 17.3961841 -6.197905435 0.672617382 1.035519207 2.333413642 0.970072672 0.07789051 0.129036863 0.122063527 0.048022117 0.097188943 6.34E-07 6.197905435 1.297894435 up TSSPRS(ph)PPSSSEIFTPAHEENVR ddPTM_A459_MK2206_30min_R1 1 TSSPRSPPSSSEIFTPAHEENVR 23 1 I3L2L5;I3L3A7;I3L317;I3L4Q0;C9JLW8 I3L2L5 FAM195B Protein FAM195B 1 T(0.106)S(0.08)S(0.08)PRS(0.732)PPS(0.001)SSEIFTPAHEENVR 130.01 4.43E-06 34138000 612.56 722.73 827.11 787.19 877.55 653.11 772.78 750.99 427.08 240.8 TRUE FALSE 560.4585553 675.6801456 770.9680777 847.8195102 842.5953253 690.0885238 721.2292562 744.4241736 471.4764943 270.6321219 2.070923996 2.496673864 2.848767811 3.132737918 3.113434278 2.549913583 2.664980236 2.750686682 1.742130575 1 8.080189276 -8.462049379 2.550915528 1.00564207 2.728909113 0.7816095 0.294067284 0.12409484 1.754763218 0.306830707 0.083553535 3.45E-09 8.462049379 1.723267043 TSSS(ph)SPANSDVEIDGIGR ddPTM_A459_MK2206_30min_R2 1 TSSSSPANSDVEIDGIGR 18 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 TSSS(0.5)S(0.5)PANSDVEIDGIGR 356.81 1.45E-184 16194000 25846 33984 31083 37474 37567 36600 40518 28587 26450 29059 TRUE FALSE 27824.78963 32296.40398 32119.29171 34412.25433 36091.93082 37992.83865 35197.93793 32323.41905 28750.57319 28110.80721 0.989825352 1.148896356 1.142595852 1.224164574 1.283916557 1.351538516 1.252114095 1.149857377 1.02275872 1 14.77883726 -8.195451545 3.044214647 1.002750102 1.204833838 0.393209475 0.091657113 0.289017549 4.907842428 0.087726264 0.026797584 6.38E-09 8.195451545 0.202083736 TSSSS(ph)PANSDVEIDGIGR ddPTM_A459_MK2206_30min_R1 2 TSSSSPANSDVEIDGIGR 18 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 TSSS(0.067)S(0.933)PANSDVEIDGIGR;T(0.197)SS(0.012)S(0.117)S(0.67)PANS(0.003)DVEIDGIGR 374.74 1.61E-230 23767000 6534.6 6366.7 5961.7 5881 5751.5 5914.5 5612.5 4901.8 4857.5 4062.2 TRUE FALSE 5978.797955 5952.226673 5557.036414 6333.955639 5522.405576 6249.373879 5238.100366 4858.944079 5362.454508 4565.456004 1.309573009 1.303752937 1.217191976 1.387365388 1.20960657 1.368838923 1.147333445 1.064284504 1.1745715 1 12.15654325 -7.430301482 4.79592975 1.091799246 1.295167127 0.697635988 0.066277535 0.124059276 4.732650156 0.026927294 0.017548877 3.71E-08 7.430301482 0.203367881 TSSSS(ph)PANSDVEIDGIGR ddPTM_A459_MK2206_30min_R2 2 TSSSSPANSDVEIDGIGR 18 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 TSSS(0.227)S(0.772)PANS(0.002)DVEIDGIGR;T(0.174)S(0.032)S(0.137)S(0.174)S(0.483)PANS(0.001)DVEIDGIGR 264.66 3.94E-43 17309400 34190 43684 36045 41311 38716 38506 44508 30113 28954 37669 TRUE FALSE 36807.61269 41514.71608 37246.72231 37935.75915 37195.81531 39971.37281 38664.04614 34048.87249 31472.36658 36439.86361 1.010091944 1.139266506 1.022142199 1.041051074 1.020745184 1.096913348 1.06103707 0.934385289 0.863679593 1 15.15322994 -7.780512685 6.210199896 0.922652146 1.057651538 0.579895327 0.047860513 0.104806998 14.02834657 0.024550275 0.012229937 1.66E-08 7.780512685 0.134999392 TSSSSSGESCAGDKS(ph)PPGQASSK ddPTM_A459_MK2206_30min_R2 4 TSSSSSGESCAGDKSPPGQASSK 23 1 O43365 O43365 HOXA3 Homeobox protein Hox-A3 1 TSSSSSGESCAGDKS(0.96)PPGQAS(0.03)S(0.009)K;TSSS(0.002)S(0.011)S(0.01)GES(0.01)CAGDKS(0.964)PPGQAS(0.001)SK;T(0.001)S(0.001)S(0.004)S(0.003)S(0.003)S(0.006)GES(0.002)CAGDKS(0.976)PPGQAS(0.002)S(0.001)K;TSSSSSGESCAGDKS(0.997)PPGQAS(0.002)S(0.001)K 86.131 0.00028974 18369300 33936.6 32998.2 35531.8 35674.3 29397.6 21574.1 38757.7 29904.5 24539.3 36043.2 TRUE FALSE 36534.81219 31359.55737 36716.41248 32759.59557 28243.30251 22395.11749 33668.76743 33813.12083 26673.68396 34867.11334 1.047830138 0.899402169 1.053038493 0.939555714 0.81002698 0.642299157 0.965631055 0.969771157 0.765009816 1 15.08957931 -6.054501073 5.210652102 0.85270064 0.99135228 0.255935919 0.108386736 0.301390509 17.79306837 0.032949755 0.044012722 8.82E-07 6.054501073 0.13865164 TSST(ph)NEDEDLNPEQK ddPTM_A459_MK2206_30min_R1 1 TSSTNEDEDLNPEQK 15 0 Q99081;Q99081-3;B4DGI9;Q99081-4;Q99081-2;B4DZP2;F5GY10 Q99081 TCF12 Transcription factor 12 1 T(0.05)S(0.01)S(0.263)T(0.677)NEDEDLNPEQK 183.76 4.90E-05 21466000 3268.9 4483.4 4162.9 3617.7 2790.2 2585.4 3052.6 3220.1 4817.1 4031.8 TRUE FALSE 2990.862889 4191.529845 3880.333947 3896.335881 2679.060426 2731.783114 2848.966624 3191.947005 5317.854783 4531.289823 0.660046699 0.925019147 0.856342035 0.859873465 0.591235725 0.602870975 0.628731936 0.704423493 1.173585224 1 12.14570605 -8.255549257 24.96662773 1.086792625 0.731656782 0.599336153 0.117135779 320.6976332 1359364.595 0.093374413 0.033217276 5.55E-09 8.255549257 -0.355135843 TSST(ph)NEDEDLNPEQK ddPTM_A459_MK2206_30min_R2 1 TSSTNEDEDLNPEQK 15 0 Q99081;Q99081-3;B4DGI9;Q99081-4;Q99081-2;B4DZP2;F5GY10 Q99081 TCF12 Transcription factor 12 1 T(0.084)S(0.084)S(0.35)T(0.482)NEDEDLNPEQK 101.3 0.016441 57542000 172050 169010 172210 142190 139960 102430 154370 174220 121820 172020 TRUE FALSE 185222.2803 160617.2092 177951.3954 130572.6222 134464.4672 106328.0454 134101.0336 196991.1522 132415.6834 166407.0015 1.113067831 0.965207039 1.069374449 0.784658223 0.808045731 0.638963772 0.805861727 1.183791249 0.795733847 1 17.34435661 -5.753799368 24.96024266 0.853659419 1.040815544 0.272172136 0.141679661 248.6123347 812217.6922 0.040922648 0.069185587 1.76E-06 5.753799368 0.187156124 TSSTCS(ph)NESLSVGGTSVTPR ddPTM_A459_MK2206_30min_R2 1 TSSTCSNESLSVGGTSVTPR 20 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 TSST(0.017)CS(0.981)NES(0.002)LSVGGTSVTPR 192.98 3.18E-23 0 6059.9 5550.1 4590.7 7177.8 7582.5 6856.4 8412.2 5131.7 5814.2 5229 TRUE FALSE 6523.850603 5274.490105 4743.751647 6591.350779 7284.772951 7117.325107 7307.668035 5802.43081 6319.908606 5058.378158 1.289711919 1.042723565 0.937800911 1.303056152 1.440140046 1.407036976 1.444666216 1.147093125 1.249394254 1 12.30445918 -4.447341944 22.09570665 1.233175377 3.928333589 0.008697971 0.175566471 3702.729028 1133019.074 0.046393699 22905.19841 3.57E-05 4.447341944 2.695158212 TSSVSNPQDSVGS(ph)PCSR ddPTM_A459_MK2206_30min_R1 3 TSSVSNPQDSVGSPCSR 17 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 TSS(0.001)VS(0.019)NPQDS(0.358)VGS(0.597)PCS(0.025)R;TSSVSNPQDSVGS(0.568)PCS(0.432)R;TSSVS(0.001)NPQDS(0.005)VGS(0.993)PCS(0.001)R 215.64 1.82E-10 163677100 8273.1 7634.8 7592.9 6436.55 6821.79 6187.82 6584.9 6598.9 5833.82 5905.11 TRUE FALSE 7569.429401 7137.773132 7077.515103 6932.294196 6550.063659 6538.169021 6145.633336 6541.206513 6440.266466 6636.679608 1.140544647 1.075503648 1.066424104 1.044542543 0.986948903 0.985156646 0.926010249 0.985614328 0.970404908 1 12.69624591 -5.715598855 0.844437825 0.966697031 1.132759806 0.859920023 0.022304958 0.294841272 0.368734549 0.009839487 0.035679189 1.92E-06 5.715598855 0.166062776 TSSVSNPQDSVGS(ph)PCSR ddPTM_A459_MK2206_30min_R2 4 TSSVSNPQDSVGSPCSR 17 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 TSSVSNPQDSVGS(0.997)PCS(0.003)R;TSS(0.001)VS(0.044)NPQDS(0.042)VGS(0.913)PCS(0.001)R;TSSVSNPQDS(0.001)VGS(0.992)PCS(0.008)R;TSSVSNPQDSVGS(0.967)PCS(0.033)R 195.48 8.86E-21 223927000 102491.2 121151 97673.5 113552.1 109287.1 88928 107202.5 83715.4 87721.2 110671.7 TRUE FALSE 110338.0051 115134.8175 100929.8857 104274.5302 104995.9393 92312.21735 93126.68298 94657.29022 95351.03141 107060.4915 1.030613661 1.075418354 0.942736992 0.97397769 0.980716022 0.862243542 0.869851069 0.884147727 0.890627626 1 16.70806666 -5.721034477 0.839057985 0.89657545 1.064746799 0.530989922 0.047583267 0.620881056 0.767601501 0.020997721 0.07575767 1.90E-06 5.721034477 0.168171349 TSSVSSISQVS(ph)PER ddPTM_A459_MK2206_30min_R2 3 TSSVSSISQVSPER 14 0 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 TSSVSSIS(0.076)QVS(0.924)PER;TSSVSSISQVS(1)PER;TSSVSS(0.006)IS(0.317)QVS(0.678)PER 227.63 3.76E-13 27463100 39396.6 40406 32729.7 43763 47505 41743 48879 38066.6 42274 39440 TRUE FALSE 42412.83399 38399.4968 33820.89186 40187.42291 45639.71501 43331.55912 42461.12859 43042.03532 45950.91611 38153.07603 1.111649136 1.006458739 0.886452559 1.053320652 1.196226353 1.135729111 1.112914947 1.128140632 1.204382998 1 15.21951176 -6.006285052 24.82754735 1.134477909 0.996659433 0.3890181 0.0726325 247.7069771 978514.6638 0.020394107 0.029112077 9.86E-07 6.006285052 -0.137818477 TST(ph)FCGTPEFLAPEVLTDTSYTR ddPTM_A459_MK2206_30min_R1 1 TSTFCGTPEFLAPEVLTDTSYTR 23 0 Q16512;Q16512-2 Q16512 PKN1 Serine/threonine-protein kinase N1 1 T(0.144)S(0.144)T(0.711)FCGTPEFLAPEVLTDTSYTR 179.44 1.43E-16 2785400 490.46 389.17 445.17 563.48 555.07 327.52 476.09 296.33 514.19 441.18 TRUE FALSE 448.7438015 363.8349623 414.9531007 606.8793272 532.9603865 346.0638994 444.3309048 293.7392181 567.6418905 495.8367091 0.905023354 0.733779802 0.836874505 1.223949974 1.074870772 0.697939247 0.896123455 0.592411196 1.144816187 1 8.953721275 -9.492405696 15.43680427 0.999999254 0.893332777 0.022624886 0.190533266 0 0 0.188353829 0.045682514 3.22E-10 9.492405696 -0.106666477 TST(ph)SPPPEK ddPTM_A459_MK2206_30min_R1 2 TSTSPPPEK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 T(0.001)ST(0.499)S(0.499)PPPEK;T(0.002)ST(0.499)S(0.499)PPPEK 137.46 0.0059667 350018500 22769.5 23461.7 23181.4 16272.8 17640.9 15857.2 23872.8 17374.8 11575.7 29502 TRUE FALSE 20832.83446 21934.33907 21607.91116 17526.13388 16938.2256 16755.02096 22280.28907 17222.89396 12779.03544 33156.93049 0.628310104 0.661531051 0.651686113 0.528581314 0.510850231 0.505324851 0.671964767 0.519435717 0.385410689 1 15.01702283 -10.75763202 5.129006222 1.000051605 0.565842899 0.697986387 0.086298172 5.39E-05 8.04E-06 0.088366197 0.021429412 1.75E-11 10.75763202 -0.434208706 TST(ph)SPPPEK ddPTM_A459_MK2206_30min_R2 1 TSTSPPPEK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 T(0.061)S(0.001)T(0.469)S(0.469)PPPEK 110.53 0.025249 63615000 92680 72764 87629 79237 65910 49685 82656 67377 47469 88675 TRUE FALSE 99775.65206 69150.64557 90550.50712 72763.08363 63322.04223 51575.79749 71803.16791 76183.40524 51597.76782 85781.54201 1.163136611 0.806125 1.055594304 0.848237067 0.738177943 0.601245866 0.837046831 0.888109533 0.601501985 1 16.38837963 -5.950852397 4.578891764 0.767752562 0.986895279 0.344187582 0.140814221 0.232331053 10.55159604 0.039082771 0.058317942 1.12E-06 5.950852397 0.219142718 TSTPS(ph)PQPSK ddPTM_A459_MK2206_30min_R2 1 TSTPSPQPSK 10 0 Q8IY18 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 1 T(0.002)S(0.012)T(0.107)PS(0.878)PQPS(0.001)K 88.338 0.032389 10847000 105960 90206 96979 104960 92277 73804 101040 95832 65265 103610 TRUE FALSE 114072.3791 85726.50121 100212.2315 96384.43225 88653.74133 76612.66294 87773.32663 108357.5714 70941.63173 100229.2142 1.13811507 0.855304533 0.999830561 0.961640107 0.884509991 0.764374574 0.875725978 1.081097685 0.707793953 1 16.61294355 -4.753916719 24.95849159 0.904937843 1.138115493 0.301877954 0.107073216 337.7528125 1120492.778 0.025859235 0.265519715 1.76E-05 4.753916719 0.233177649 TSTPS(ph)PQPSKR ddPTM_A459_MK2206_30min_R1 1 TSTPSPQPSKR 11 1 Q8IY18 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 1 TST(0.002)PS(0.979)PQPS(0.018)KR 72.209 0.03143 6038600 5462.8 5417.9 5508.1 4505.7 4492.1 4564.3 4956.6 4483.2 4169.1 3956.5 TRUE FALSE 4998.160174 5065.193725 5134.225518 4852.729795 4313.170145 4822.726722 4625.954258 4444.003855 4602.492864 4446.66109 1.124025437 1.139100467 1.154624878 1.091319913 0.96997951 1.084572587 1.040320853 0.99940242 1.035044671 1 12.11850674 -6.022730587 5.303700568 1.025585247 1.13753257 0.764746903 0.029556204 0.086638543 7.224660637 0.00860517 0.011837498 9.49E-07 6.022730587 0.111947323 TSTPS(ph)PQPSKR ddPTM_A459_MK2206_30min_R2 1 TSTPSPQPSKR 11 1 Q8IY18 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 1 T(0.039)ST(0.08)PS(0.88)PQPSKR 110.15 0.016138 1799200 7900.3 12193 10078 10178 14112 10193 11813 7872.5 11383 13533 TRUE FALSE 8505.153042 11587.51335 10413.99549 9346.424842 13557.89197 10580.90176 10261.93891 8901.46278 12373.07276 13091.41932 0.649673869 0.885122772 0.79548254 0.713935183 1.035631939 0.808231827 0.783867559 0.67994635 0.945128444 1 13.6763339 -14.52287875 0.251837037 2.157993448 0.795273086 0.224687346 0.111299354 303.2427255 2.996694262 180.8342571 0.156855928 3.00E-15 14.52287875 -1.362720362 TSTPSPQPS(ph)K ddPTM_A459_MK2206_30min_R2 1 TSTPSPQPSK 10 0 Q8IY18 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 1 T(0.029)S(0.002)T(0.008)PS(0.275)PQPS(0.685)K 112.64 0.0081123 13133000 100170 83377 81593 88102 85507 67970 101990 78863 60523 88688 TRUE FALSE 107839.0922 79236.61942 84313.2699 80903.78478 82149.56554 70556.64598 88598.59049 89170.66488 65787.18114 85794.11782 1.256952049 0.92356704 0.982739517 0.942999204 0.957519788 0.822394912 1.032688403 1.039356393 0.766802933 1 16.38859112 -4.759264234 24.99996343 0.943184447 1.256952452 0.567988468 0.08267016 41.63893043 478461.8801 0.019782819 0.127249203 1.74E-05 4.759264234 0.313768005 TSTS(ph)PPPEK ddPTM_A459_MK2206_30min_R1 3 TSTSPPPEK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TST(0.211)S(0.788)PPPEK;T(0.02)S(0.013)T(0.165)S(0.802)PPPEK;T(0.289)S(0.005)T(0.054)S(0.651)PPPEK 126.39 0.0048162 431897300 32299.9 34131.4 31080.7 22355.6 23905.5 21582.5 33591.6 25639.2 17005.2 40115 TRUE FALSE 29552.62389 31909.43966 28971.02868 24077.43219 22953.29331 22804.4825 31350.76566 25415.03918 18772.95139 45084.74905 0.655490482 0.707765715 0.642590439 0.534048269 0.509114363 0.505813673 0.695374075 0.563716993 0.416392501 1 15.46035187 -10.69973652 4.879923334 1.000040034 0.583804208 0.666497585 0.088868419 4.13E-05 6.96E-06 0.091729529 0.022245543 2.00E-11 10.69973652 -0.416235826 TSTS(ph)PPPEK ddPTM_A459_MK2206_30min_R2 2 TSTSPPPEK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 T(0.133)S(0.002)T(0.176)S(0.69)PPPEK;T(0.009)S(0.004)T(0.029)S(0.959)PPPEK 126.39 0.0048162 126212000 332815 261220 275376 296545 223198 192070 276286 219886 193352 304165 TRUE FALSE 358295.5723 248248.1946 284556.8984 272316.3249 214434.125 199379.3584 240009.3163 248625.8552 210169.4075 294240.121 1.217697883 0.843692539 0.967090747 0.92549012 0.728772556 0.677607655 0.815692012 0.84497605 0.714278552 1 18.16663445 -1.522878872 0.765131537 0.801060485 76.27175077 0.54109162 0.103991628 314.9840148 1.2741472 0.038284141 41050.5592 0.029999991 1.522878872 75.47069028 TSTTGVATTQS(ph)PTPR ddPTM_A459_MK2206_30min_R1 5 TSTTGVATTQSPTPR 15 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 TSTTGVAT(0.01)T(0.041)QS(0.813)PT(0.135)PR;TSTTGVATTQS(0.724)PT(0.276)PR;TSTTGVATTQS(0.85)PT(0.15)PR;TSTTGVATTQS(0.991)PT(0.009)PR;TSTTGVATTQS(0.994)PT(0.006)PR 222.88 3.64E-51 100742800 15820.52 15099.99 15781.83 13260.78 14691.06 13641.8 15666.44 14091.2 13490.44 12891.7 TRUE FALSE 14474.9017 14116.97791 14710.60335 14282.12757 14105.88397 14414.18693 14621.36037 13968.00212 14892.81951 14488.82112 0.999039299 0.974335854 1.015307127 0.985734274 0.973570165 0.994848843 1.00914769 0.964053735 1.027883455 1 13.82265259 -8.280698958 24.9906601 1.013941724 0.990035162 0.260353 0.016456147 1256.881122 1630877.058 0.014917116 0.003875164 5.24E-09 8.280698958 -0.023906562 TSTTGVATTQS(ph)PTPR ddPTM_A459_MK2206_30min_R2 4 TSTTGVATTQSPTPR 15 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 TSTTGVATTQS(0.919)PT(0.081)PR;TSTTGVATT(0.001)QS(0.499)PT(0.499)PR;TSTTGVATT(0.001)QS(0.499)PT(0.499)PR;TSTTGVAT(0.008)T(0.008)QS(0.896)PT(0.089)PR 234.63 1.83E-14 88846000 245269.1 241934.1 251111.3 271697.5 275620.5 258772.4 352130.3 478607.5 387637.7 335887.9 TRUE FALSE 264047.0909 229920.0044 259483.2254 249498.9451 264798.2543 268620.165 305895.1686 541163.1436 421353.7265 324927.9053 0.812632853 0.707603135 0.798587075 0.767859396 0.814944638 0.826706973 0.941424739 1.665486819 1.296760665 1 18.30976012 -7.591311651 6.34945831 1.358315865 0.792765393 0.703352927 0.154066919 0.099999825 7.144922516 0.069708431 0.039854919 2.56E-08 7.591311651 -0.565550472 TSVATSTEGKDKDVTLS(ph)PVK ddPTM_A459_MK2206_30min_R1 1 TSVATSTEGKDKDVTLSPVK 20 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TSVATSTEGKDKDVT(0.03)LS(0.97)PVK 68.552 0.014899 27824000 2040.8 2280.2 2145.2 2432.6 1949.6 1089.4 1331.5 2233.8 1224.3 873.25 TRUE FALSE 1867.219243 2131.758566 1999.589801 2619.959273 1871.943304 1151.080887 1242.678064 2214.270122 1351.570366 981.4348027 1.902540279 2.172083729 2.037414809 2.669519428 1.907353701 1.172855174 1.26618504 2.256156105 1.37713719 1 9.938748622 -6.543777583 8.271414592 1.488532289 2.195795538 0.503967991 0.364085674 0.180309147 58.10474955 0.121059503 0.122515731 2.86E-07 6.543777583 0.70726325 TSVLGGGEDGIEPVS(ph)PPEGMTEPGHSR ddPTM_A459_MK2206_30min_R1 10 TSVLGGGEDGIEPVSPPEGMTEPGHSR 27 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 TSVLGGGEDGIEPVS(0.989)PPEGMT(0.008)EPGHS(0.003)R;TSVLGGGEDGIEPVS(1)PPEGMTEPGHSR;TSVLGGGEDGIEPVS(0.996)PPEGMT(0.003)EPGHS(0.001)R;TSVLGGGEDGIEPVS(0.999)PPEGMT(0.001)EPGHSR;TSVLGGGEDGIEPVS(0.99)PPEGMT(0.008)EPGHS(0.002)R;TSVLGGGEDGIEPVS(1)PPEGMTEPGHSR;TSVLGGGEDGIEPVS(0.999)PPEGMT(0.001)EPGHSR;TSVLGGGEDGIEPVS(1)PPEGMTEPGHSR;TSVLGGGEDGIEPVS(0.998)PPEGMT(0.002)EPGHSR;TSVLGGGEDGIEPVS(0.993)PPEGMT(0.007)EPGHSR 192.85 9.69E-33 329897300 10419.9 9882.81 10031.26 7890.03 10374.48 10043.7 11798.03 9959.25 10356.78 9690.56 TRUE FALSE 9533.632788 9239.437273 9350.36602 8497.721478 9961.242493 10612.36561 11011.00495 9872.177327 11433.40434 10891.09973 0.875359975 0.848347504 0.85853277 0.780244575 0.914622282 0.974407165 1.011009468 0.906444489 1.049793375 1 13.41086202 -6.567146342 3.430720137 0.983669238 0.842245106 0.738704253 0.041244644 0.122795572 3.000152582 0.013613784 0.014037844 2.71E-07 6.567146342 -0.141424133 TSVLGGGEDGIEPVS(ph)PPEGMTEPGHSR ddPTM_A459_MK2206_30min_R2 10 TSVLGGGEDGIEPVSPPEGMTEPGHSR 27 0 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 TSVLGGGEDGIEPVS(0.992)PPEGMT(0.007)EPGHS(0.001)R;TSVLGGGEDGIEPVS(0.994)PPEGMT(0.005)EPGHSR;TSVLGGGEDGIEPVS(0.95)PPEGMT(0.037)EPGHS(0.013)R;TSVLGGGEDGIEPVS(0.999)PPEGMT(0.001)EPGHSR;TSVLGGGEDGIEPVS(0.998)PPEGMT(0.002)EPGHSR;TSVLGGGEDGIEPVS(0.984)PPEGMT(0.016)EPGHS(0.001)R;TSVLGGGEDGIEPVS(0.997)PPEGMT(0.003)EPGHSR;TSVLGGGEDGIEPVS(0.999)PPEGMT(0.001)EPGHSR;TSVLGGGEDGIEPVS(0.999)PPEGMT(0.001)EPGHSR;TSVLGGGEDGIEPVS(0.997)PPEGMT(0.003)EPGHSR 116.96 5.52E-12 206397300 135278 165130.3 138118.1 171766.5 156341.6 148431.3 164456.9 121732.4 128776.7 145258.7 TRUE FALSE 145634.9877 156930.1694 142722.8885 157732.6275 150202.8432 154079.9571 142863.5115 137643.2426 139977.4646 140518.9205 1.036408387 1.116790314 1.015684493 1.122500991 1.068915436 1.096506837 1.016685233 0.979535298 0.99614674 1 17.10040487 -7.421746776 4.152053823 0.991719328 1.076794163 0.604608855 0.031324972 0.14735887 4.398871148 0.013064029 0.008394789 3.79E-08 7.421746776 0.085074834 TSVPENHAQSR ddPTM_A459_MK2206_30min_R1 3 TSVPENHAQSR 11 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 ;; 136.81 0.0019461 1514770 2349.29 1659.55 1678.67 1470.2 2553.91 2363.54 2951.26 2079.69 844.28 1353.37 FALSE TRUE 2149.470549 1551.512993 1564.726557 1583.435059 2452.182357 2497.361592 2754.38683 2061.50749 932.0459273 1521.035693 1.413162465 1.020037203 1.028724418 1.041024261 1.612179364 1.641882307 1.810862719 1.355331436 0.612770582 1 10.57083829 -6.241349606 24.6798835 1.3953578 1.1112576 0.071130547 0.340880496 1541.096846 1893205.736 0.10542684 0.135911609 5.74E-07 6.241349606 -0.2841002 TSVPENHAQSR ddPTM_A459_MK2206_30min_R2 2 TSVPENHAQSR 11 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 ; 112.94 0.010376 1967700 8416.4 8338.2 10123.5 13381.8 12643.7 13715.9 12819.1 11703 11201.4 9494.6 FALSE TRUE 9060.766055 7924.137113 10461.01244 12288.46413 12147.24481 14237.86819 11135.93677 13232.62228 12175.67752 9184.79198 0.9864966 0.862745409 1.138949305 1.337914257 1.322538914 1.550156848 1.212432116 1.440710069 1.325634544 1 13.16503133 -5.530859094 2.871376847 1.337767486 0.925701596 0.545565522 0.139856898 0.169609004 2.817828531 0.036776294 0.079555158 2.95E-06 5.530859094 -0.412065891 TSVS(ph)PAPDK ddPTM_A459_MK2206_30min_R1 2 TSVSPAPDK 9 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 T(0.195)S(0.001)VS(0.804)PAPDK;T(0.141)S(0.001)VS(0.858)PAPDK 127.51 0.0045456 42086000 14457.5 15554 15153 11837.4 11296.1 10221.3 11687.6 11436.7 11197.5 12310.9 TRUE FALSE 13227.81371 14541.43177 14124.45658 12749.1186 10846.15242 10800.02117 10907.94153 11336.71014 12361.5202 13836.06723 0.956038554 1.050980132 1.020843303 0.921440926 0.783904287 0.780570157 0.788370087 0.819359284 0.8934273 1 13.75614631 -5.982929808 3.542901243 0.829779804 1.012288218 0.545046086 0.066678576 0.154406944 4.153530506 0.019288906 0.028450023 1.04E-06 5.982929808 0.182508415 TSVS(ph)PAPDKTK ddPTM_A459_MK2206_30min_R2 1 TSVSPAPDKTK 11 1 O75362 O75362 ZNF217 Zinc finger protein 217 1 T(0.003)S(0.006)VS(0.991)PAPDKTK 127.71 0.013835 2651600 9714 17366 12277 15382 18443 12250 15084 9779 13996 13122 TRUE FALSE 10457.71131 16503.62969 12686.30905 14125.2414 17718.83515 12716.18233 13103.45268 11057.14888 15213.34678 12693.83021 0.823842066 1.300130017 0.999407495 1.112764324 1.395861994 1.001760865 1.032269414 0.871064816 1.198483556 1 13.63183983 TSVSQNVIPS(ph)SAQK ddPTM_A459_MK2206_30min_R1 1 TSVSQNVIPSSAQK 14 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 TSVSQNVIPS(0.913)S(0.087)AQK 198.81 8.92E-05 7122400 3719.6 4611.9 4333.8 3403.5 4032.2 3592.4 3391.8 3510.2 3511.8 3171.3 TRUE FALSE 3403.228488 4311.664472 4039.633731 3665.63816 3871.588936 3795.798584 3165.539211 3479.510691 3876.864177 3564.184586 0.954840695 1.209719746 1.13339633 1.028464736 1.086248156 1.064983727 0.888152433 0.976243123 1.087728226 1 11.79935634 -7.02313171 23.42229355 0.984696443 1.088041106 0.256887102 0.076419662 452.3675998 458048.4951 0.029059736 0.022699893 9.48E-08 7.02313171 0.103344663 TSVSQNVIPSS(ph)AQK ddPTM_A459_MK2206_30min_R1 3 TSVSQNVIPSSAQK 14 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 TSVSQNVIPS(0.067)S(0.933)AQK;TSVSQNVIPS(0.225)S(0.775)AQK;TSVSQNVIPS(0.183)S(0.817)AQK 242.01 1.10E-19 21535200 11431.6 13266.7 11794.3 10502.6 10282.3 9994.5 9532.2 10666.2 10678.9 8207.5 TRUE FALSE 10459.28239 12403.03542 10993.73578 11311.51207 9872.734218 10560.37995 8896.32433 10572.94654 11789.00987 9224.307063 1.133882721 1.344603484 1.191822399 1.226272282 1.070295487 1.144842629 0.964443645 1.146204963 1.278037449 1 13.17122482 -6.249372778 21.71512114 1.103348193 1.230440689 0.290294735 0.094344035 171.2861707 308244.2978 0.027842079 0.035552885 5.63E-07 6.249372778 0.127092496 TSVSQNVIPSS(ph)AQK ddPTM_A459_MK2206_30min_R2 2 TSVSQNVIPSSAQK 14 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 TSVSQNVIPS(0.078)S(0.922)AQK;TSVS(0.001)QNVIPS(0.209)S(0.789)AQK 246.75 2.81E-27 49140000 270020 261690 264850 292010 289340 219367 283310 215290 196519 284420 TRUE FALSE 290692.9388 248694.8551 273679.9668 268151.8489 277979.0578 227715.1649 246111.0567 243429.1422 213611.8674 275139.3987 1.056529673 0.903886744 0.994695664 0.974603602 1.010320801 0.827635613 0.894495873 0.884748398 0.776376878 1 18.06980322 -6.756595945 24.99961006 0.870563407 0.982960868 0.428894939 0.063924115 113.4304507 585476.3872 0.020195987 0.019584891 1.75E-07 6.756595945 0.112397461 TSVTT(ph)SPQSDMMR ddPTM_A459_MK2206_30min_R2 1 TSVTTSPQSDMMR 13 0 O60318;O60318-2 O60318 MCM3AP Germinal-center associated nuclear protein 1 T(0.001)SVT(0.095)T(0.859)S(0.045)PQSDMMR 124.81 0.0051253 5155000 16212 23011 20048 22700 17755 16856 26238 18191 22211 25826 TRUE FALSE 17453.20318 21868.3072 20716.39031 20845.33739 17057.84949 17497.46689 22792.91908 20568.62616 24142.87263 24983.29974 0.698594796 0.875317009 0.829209533 0.834370864 0.682770077 0.700366528 0.912326207 0.823295016 0.966360444 1 14.60867642 -8.130404464 1.24153306 1.000787878 0.782757353 0.543496119 0.071532166 0.371824074 1.068610355 0.069176796 0.022879194 7.41E-09 8.130404464 -0.218030525 TSVTTS(ph)PQSDMMR ddPTM_A459_MK2206_30min_R2 1 TSVTTSPQSDMMR 13 0 O60318;O60318-2 O60318 MCM3AP Germinal-center associated nuclear protein 1 TSVT(0.001)T(0.016)S(0.983)PQSDMMR 178.68 0.00010741 4369300 23088 32485 27261 32188 33591 29407 34617 25219 24071 26893 TRUE FALSE 24855.63503 30871.84214 28169.86813 29558.13744 32272.04856 30526.10399 30071.74632 28515.20989 26164.65207 26015.48361 0.955416989 1.186671853 1.082811627 1.136174821 1.240493894 1.173382146 1.155917252 1.096086097 1.005733834 1 14.66708291 -8.156414113 2.875069009 0.998571347 1.138658636 0.337995899 0.071426475 0.3048625 4.519756243 0.06077517 0.018968123 6.98E-09 8.156414113 0.14008729 TSYAQHQQVR ddPTM_A459_MK2206_30min_R1 4 TSYAQHQQVR 10 0 D6RAT0;P61247;D6RG13;D6R9B6;D6RB09;H0Y9Y4;D6RAS7;H0Y8L7;E9PFI5 D6RAT0 RPS3A 40S ribosomal protein S3a 0 ;;; 192.64 0.00024568 13951500 13794.9 10368.1 11466.6 8889.6 14207.3 12414.8 15454 12929.4 6152.97 10225.3 FALSE TRUE 12621.57132 9693.134806 10688.27914 9574.278532 13641.39316 13117.71525 14423.09186 12816.35962 6792.59325 11492.08736 1.098283621 0.843461636 0.930055507 0.833119192 1.18702484 1.141456276 1.255045442 1.115233396 0.59106697 1 13.48835324 -4.456281662 21.61259173 1.00273732 3.727415023 0.024555162 0.18932017 1517.372879 517286.8523 0.047602078 10020.84438 3.50E-05 4.456281662 2.724677703 TSYAQHQQVR ddPTM_A459_MK2206_30min_R2 3 TSYAQHQQVR 10 0 D6RAT0;P61247;D6RG13;D6R9B6;D6RB09;H0Y9Y4;D6RAS7;H0Y8L7;E9PFI5 D6RAT0 RPS3A 40S ribosomal protein S3a 0 ;; 146.11 0.0012301 12639360 18269.9 28749.6 22669.5 33295.6 26998.7 32603.3 32481.5 22563.6 26322.4 22219.8 FALSE TRUE 19668.65759 27321.93667 23425.28982 30575.24297 25938.59538 33844.04143 28216.64003 25512.73999 28611.87477 21494.76975 0.915043884 1.271096969 1.08981348 1.42245036 1.206739858 1.574524493 1.312721205 1.186927811 1.331108689 1 14.39169804 -5.743322217 24.99493055 1.307680445 1.1098959 0.229123414 0.163934763 352.8875934 486849.437 0.042650967 0.073688812 1.81E-06 5.743322217 -0.197784545 TT(ph)PNSGDVQVTEDAVR ddPTM_A459_MK2206_30min_R2 1 TTPNSGDVQVTEDAVR 16 0 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 T(0.148)T(0.852)PNSGDVQVTEDAVR 248.7 6.07E-29 25498000 52531 44250 48860 45903 36037 31705 35333 30795 24823 33876 TRUE FALSE 56552.81375 42052.60935 50488.96801 42152.57806 34622.00631 32911.55599 30693.73466 34820.01224 26982.05967 32770.62889 1.725716462 1.28324084 1.540677421 1.286291398 1.056495022 1.004300409 0.936623302 1.062537199 0.823361058 1 15.00011574 -6.122964911 1.395542887 0.958898789 1.520497245 0.81653643 0.11556435 0.167704232 0.658596454 0.040174786 0.063880622 7.53E-07 6.122964911 0.561598456 TT(ph)PTMSEEPPLDLTGK ddPTM_A459_MK2206_30min_R2 3 TTPTMSEEPPLDLTGK 16 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.128)T(0.871)PT(0.001)MSEEPPLDLTGK;T(0.005)T(0.984)PT(0.01)MSEEPPLDLTGK;T(0.015)T(0.985)PTMSEEPPLDLTGK 233.62 2.89E-15 30366400 140877 155750 141046 149911 162161 122466 155600 124702 119269 156682 TRUE FALSE 151662.6514 148015.6815 145748.4032 137662.7918 155793.7443 127126.5294 135169.5331 141000.9796 129642.802 151569.4792 1.000614717 0.976553342 0.96159467 0.908248762 1.027870157 0.838734356 0.891799153 0.930272904 0.855335802 1 17.20961975 -6.760400915 24.99996371 0.898156174 0.970613423 0.335973637 0.049992998 32.21463068 775541.382 0.016260832 0.015388449 1.74E-07 6.760400915 0.072457249 TT(ph)SPLEEEER ddPTM_A459_MK2206_30min_R2 1 TTSPLEEEER 10 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.001)T(0.872)S(0.127)PLEEEER 150.09 0.0016914 75449000 22472 35077 34350 32447 33246 39730 27689 25453 28315 28642 TRUE FALSE 24192.4736 33335.12719 35495.21186 29795.97631 31940.59499 41241.95299 24053.40104 28779.79449 30777.78752 27707.41389 0.873140803 1.203112182 1.281072712 1.07537919 1.152781531 1.488480778 0.868121476 1.038703742 1.110814154 1 14.75798444 TT(ph)SPLEEEEREIK ddPTM_A459_MK2206_30min_R1 1 TTSPLEEEEREIK 13 1 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.065)T(0.467)S(0.467)PLEEEEREIK 208.51 9.97E-05 13095000 2546.6 2578.4 2502.2 3126.3 2547.2 1916.5 1731.7 2497.3 1346.7 1045.6 TRUE FALSE 2329.998297 2410.545691 2332.357636 3367.088168 2445.73963 2025.010574 1616.181453 2475.466369 1486.694284 1175.136822 1.982746395 2.051289387 1.984754109 2.865273307 2.081238188 1.723212596 1.37531343 2.106534595 1.265124415 1 10.19861303 -6.807506525 3.269725108 1.533082416 2.219565015 0.495624371 0.357357093 0.232848722 5.094006146 0.131614314 0.119261688 1.56E-07 6.807506525 0.686482599 TT(ph)SPPEVSGYSYEK ddPTM_A459_MK2206_30min_R1 1 TTSPPEVSGYSYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.394)T(0.591)S(0.015)PPEVSGYSYEK 140.31 0.0013179 75113000 1421.3 1361.4 1662.8 1293 1732.6 1485.1 1602.4 2142.3 1294.3 1250.2 TRUE FALSE 1300.410971 1272.772613 1549.933769 1392.587084 1663.586873 1569.185079 1495.50682 2123.570097 1428.847117 1405.084215 0.925503936 0.905833686 1.103089589 0.991105778 1.18397663 1.116790768 1.064353869 1.511347203 1.016912084 1 10.45644089 -5.580877026 0.754747734 1.17938041 0.869165936 0.247935197 0.142881017 1.436518046 1.261893595 0.065471256 0.31668125 2.62E-06 5.580877026 -0.310214475 TTAGS(ph)VDWTDQLGLR ddPTM_A459_MK2206_30min_R2 1 TTAGSVDWTDQLGLR 15 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 TTAGS(1)VDWTDQLGLR 142.57 0.000328 0 7166.7 10094 7425.2 11399 10983 8925.5 13970 8230 7241.4 8246.6 TRUE FALSE 7715.388062 9592.746638 7672.752462 10467.66524 10551.75223 9265.166157 12135.72222 9305.689258 7871.243883 7977.514117 0.967141888 1.202473164 0.961797416 1.31214625 1.322686752 1.161410186 1.521241083 1.166489851 0.986678778 1 12.96172354 -4.760819199 24.3022878 1.198454453 0.967141565 0.12378006 0.165891689 21.77026087 852088.5368 0.041688874 0.240784218 1.73E-05 4.760819199 -0.231312888 TTAPT(ph)EGKSPLKKEDR ddPTM_A459_MK2206_30min_R1 1 TTAPTEGKSPLKKEDR 16 3 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 T(0.002)TAPT(0.993)EGKS(0.005)PLKKEDR 81.789 0.035393 0 2726.2 3692.6 3807.3 3641.1 2475.7 1985.6 2050.4 2927.8 2165.3 1574.9 TRUE FALSE 2494.322374 3452.211069 3548.871084 3921.538153 2377.087627 2098.022956 1913.621557 2902.202553 2390.390684 1770.010502 1.409213319 1.950390162 2.005000016 2.215545133 1.342979391 1.185316671 1.081135708 1.639652731 1.350495198 1 10.7895422 -6.359346982 6.826491561 1.280395286 1.905344536 0.605729842 0.248470966 0.182779112 10.94727018 0.079627021 0.090346206 4.37E-07 6.359346982 0.62494925 TTAPTEGKS(ph)PLK ddPTM_A459_MK2206_30min_R1 1 TTAPTEGKSPLK 12 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 TTAPT(0.002)EGKS(0.998)PLK 161.49 0.002291 15669000 2894.6 3430 2636.6 2820.5 2101 1982.6 2407.8 2215.4 2915.7 3299.6 TRUE FALSE 2648.39907 3206.706377 2457.634938 3037.735399 2017.312721 2094.853099 2247.180055 2196.030991 3218.797449 3708.379359 0.714166166 0.864719077 0.662724792 0.819154435 0.54398769 0.564897195 0.605973618 0.592180783 0.867979551 1 11.85657312 -8.475139915 4.159704021 0.998595257 0.673030006 0.543255597 0.099930493 0.154449203 5.821006377 0.104862264 0.027461831 3.35E-09 8.475139915 -0.325565251 TTCMSSQGS(ph)DDEQIKR ddPTM_A459_MK2206_30min_R1 1 TTCMSSQGSDDEQIKR 16 1 E7EW69;E7EX04;B5ME97;Q9P0V9;Q9P0V9-2;C9JEW2;C9JNR7 E7EW69 Sep-10 Septin-10 1 TTCMS(0.001)SQGS(0.999)DDEQIKR 229.92 5.45E-15 4822600 1124.2 652.66 976.47 633.94 559.8 609.43 822.1 792.17 693.6 632.83 TRUE FALSE 1028.580887 610.1717154 910.189937 682.7661686 537.5019806 643.9353999 767.259209 785.2441412 765.7022021 711.229758 1.446200577 0.857910835 1.279741078 0.959979755 0.755736068 0.905383096 1.078778272 1.104065363 1.076589096 1 9.474171878 -4.749452964 24.95145759 1.004319827 1.4462016 0.480957579 0.138410865 512.5175591 1066812.164 0.036244138 0.592415331 1.78E-05 4.749452964 0.441881773 TTCMSSQGS(ph)DDEQIKR ddPTM_A459_MK2206_30min_R2 3 TTCMSSQGSDDEQIKR 16 1 E7EW69;E7EX04;B5ME97;Q9P0V9;Q9P0V9-2;C9JEW2;C9JNR7 E7EW69 Sep-10 Septin-10 1 TTCMS(0.002)S(0.064)QGS(0.933)DDEQIKR;TTCMS(0.004)S(0.071)QGS(0.925)DDEQIKR;TTCMS(0.019)S(0.364)QGS(0.617)DDEQIKR 141.1 0.00071438 22370100 56394 68525 71347 64742 68436 55613 74765 54109 57382 69913 TRUE FALSE 60711.568 65122.14814 73725.67337 59452.3715 65748.85878 57729.39168 64948.26569 61181.23208 62372.98264 67631.74454 0.897678574 0.962893218 1.090104564 0.87906015 0.972159734 0.853584246 0.9603222 0.904623007 0.922244178 1 16.04541295 TTDEELS(ph)ELEDR ddPTM_A459_MK2206_30min_R2 2 TTDEELSELEDR 12 0 H7C3K9;H7C052;Q9BV36-5;H7C190;Q9BV36;Q9BV36-4;Q9BV36-2;H7C2D8 H7C3K9;Q9BV36;Q9BV36-2 MLPH Melanophilin 1 T(0.001)TDEELS(0.999)ELEDR;TTDEELS(1)ELEDR 153.39 0.00047022 12867200 48481 54124 42640 68255 57997 68916 63240 48245 67422 54548 TRUE FALSE 52192.74264 51436.28086 44061.59632 62678.34816 55719.74637 71538.64667 54936.51204 54550.78715 73286.24369 52768.10323 0.989096432 0.974760844 0.835004361 1.187807488 1.055936124 1.355717608 1.041093173 1.033783362 1.388836043 1 15.68737851 -5.772669117 24.99974183 1.153168844 0.937134569 0.368956678 0.131164027 219.1082481 487780.748 0.035733506 0.053548049 1.69E-06 5.772669117 -0.216034275 TTDLSIQS(ph)PSADLEVQAGQVDVK ddPTM_A459_MK2206_30min_R1 1 TTDLSIQSPSADLEVQAGQVDVK 23 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 T(0.036)T(0.012)DLS(0.099)IQS(0.784)PS(0.07)ADLEVQAGQVDVK 78.757 0.00045101 3317200 2342.8 2361.9 1981.3 1456.2 1831.7 2036.9 1776.4 1613 1805.9 1743.4 TRUE FALSE 2143.532557 2208.139881 1846.814876 1568.356776 1758.73951 2152.227518 1657.899597 1598.897711 1993.629767 1959.385554 1.093982015 1.126955272 0.94254797 0.800432959 0.897597467 1.098419611 0.846132398 0.816019955 1.017477016 1 10.93618559 -5.303396762 5.443839214 0.91736599 1.111104299 0.399443197 0.089402075 0.172296321 13.28955366 0.024010094 0.053210821 4.97E-06 5.303396762 0.193738309 TTDLSIQS(ph)PSADLEVQAGQVNVK ddPTM_A459_MK2206_30min_R1 1 TTDLSIQSPSADLEVQAGQVNVK 23 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 T(0.006)T(0.006)DLS(0.165)IQS(0.758)PS(0.065)ADLEVQAGQVNVK 192.89 1.42E-22 6976900 2035.8 1894.6 1589.3 1336.5 1917.1 1605.7 1867.1 1588.8 1515.8 1407.9 TRUE FALSE 1862.64452 1771.261196 1481.422744 1439.437462 1840.737847 1696.613346 1742.549166 1574.909289 1673.372834 1582.321281 1.177159495 1.119406796 0.936233849 0.909699869 1.163314852 1.072230631 1.101261284 0.995315748 1.057543025 1 10.62782685 -7.772902605 24.92554887 1.019822052 1.063031016 0.069432406 0.083552909 845.0651703 1837474.082 0.048844159 0.023780504 1.69E-08 7.772902605 0.043208964 TTDLSIQSPS(ph)ADLEVQAGQVNVK ddPTM_A459_MK2206_30min_R1 1 TTDLSIQSPSADLEVQAGQVNVK 23 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 TTDLS(0.002)IQS(0.159)PS(0.839)ADLEVQAGQVNVK 182.66 3.29E-17 5782400 3239.5 3396.2 2661.5 2060.6 3140.5 2729.1 2817.8 2339.3 2116.2 1956.5 TRUE FALSE 2963.963514 3175.106763 2480.844795 2219.307769 3015.407235 2883.619284 2629.829703 2318.847747 2336.186563 2198.885991 1.347938695 1.443961522 1.128228024 1.009287329 1.371334052 1.311400089 1.195982745 1.054555696 1.062440969 1 11.10255709 -1.522878745 0.097450884 0.856524684 2.29171978 0.404616767 0.120584542 156.1736927 1.086840123 1.888868335 29.94593188 0.03 1.522878745 1.435195096 TTDLSIQSPS(ph)ADLEVQAGQVNVK ddPTM_A459_MK2206_30min_R2 2 TTDLSIQSPSADLEVQAGQVNVK 23 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 TTDLS(0.001)IQS(0.303)PS(0.696)ADLEVQAGQVNVK;T(0.001)T(0.001)DLS(0.002)IQS(0.263)PS(0.734)ADLEVQAGQVNVK 136.16 3.42E-06 8288500 70520 80438 69667 71542 65804 57514 65978 48841 57700 58784 TRUE FALSE 75919.06542 76443.56589 71989.66301 65696.78975 63220.20432 59702.73557 57315.00935 55224.6864 62718.6417 56865.88289 1.335054721 1.344278186 1.26595525 1.155293586 1.111742245 1.049886725 1.007897995 0.971139171 1.102922148 1 15.79527574 -5.920111266 0.951888274 1.01740054 1.365654018 0.931176599 0.034347934 0.145026459 0.260260591 0.014467078 0.035611566 1.20E-06 5.920111266 0.348253477 TTEEQVQAS(ph)TPCPR ddPTM_A459_MK2206_30min_R2 1 TTEEQVQASTPCPR 14 0 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 TTEEQVQAS(0.903)T(0.097)PCPR 187.08 7.16E-15 0 25995 24555 19421 26728 24418 23482 25097 19936 24041 25401 TRUE FALSE 27985.19719 23335.63441 20068.48645 24544.2369 23459.22663 24375.62396 21801.73375 22541.70365 26132.04272 24572.16745 1.138898196 0.949677494 0.816716168 0.998863326 0.954707259 0.992001378 0.887253182 0.91736733 1.063481387 1 14.5847375 -8.262785787 24.99768333 1.031740696 0.95218906 0.119839774 0.080270499 252.4160366 4686136.347 0.064873903 0.020334682 5.46E-09 8.262785787 -0.079551636 TTEEQVQAST(ph)PCPR ddPTM_A459_MK2206_30min_R1 3 TTEEQVQASTPCPR 14 0 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 TTEEQVQAS(0.078)T(0.922)PCPR;TTEEQVQAS(0.007)T(0.993)PCPR;TTEEQVQAST(1)PCPR 233.62 2.62E-13 30121000 10814.7 10305.8 10455.5 8937.9 11144.9 9669 9846.4 9408.3 7075.2 8005.4 TRUE FALSE 9894.852975 9634.890547 9745.809791 9626.298607 10700.97503 10216.45042 9189.564622 9326.044225 7810.692359 8997.16939 1.099774001 1.070880199 1.083208437 1.069925239 1.189371298 1.135518293 1.021383974 1.036553145 0.868127743 1 13.13525547 -7.776049037 1.877088645 0.942645168 1.105003788 0.620480568 0.050489754 0.233336669 1.588384452 0.037638871 0.015039444 1.67E-08 7.776049037 0.162358621 TTEEQVQAST(ph)PCPR ddPTM_A459_MK2206_30min_R2 3 TTEEQVQASTPCPR 14 0 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 TTEEQVQAS(0.003)T(0.997)PCPR;TTEEQVQAS(0.001)T(0.999)PCPR;TTEEQVQAS(0.032)T(0.968)PCPR 267.07 8.62E-44 47296700 87790 107425 93171 114203 104504 115580 109927 83870 85471 91680 TRUE FALSE 94511.2699 102090.4307 96277.27464 104872.2496 100400.6479 119978.4779 95493.45285 94832.09697 92905.11308 88688.48911 1.065654301 1.151112526 1.085566747 1.182478703 1.132059514 1.352807778 1.076728827 1.069271761 1.047544208 1 16.43645925 -7.502916314 24.96999729 1.049644802 1.162074699 0.360699547 0.074713525 894.9043688 1119395.185 0.032291226 0.021428517 3.14E-08 7.502916314 0.112429897 TTEINRLPSANQGS(ph)PFK ddPTM_A459_MK2206_30min_R1 1 TTEINRLPSANQGSPFK 17 1 E5RFE4;Q56NI9;E5RFP7;E5RIE3 E5RFE4 ESCO2 N-acetyltransferase ESCO2 1 TTEINRLPS(0.008)ANQGS(0.992)PFK 110.37 0.010154 12431000 1558.2 1626 1473.5 1859.3 1336.6 974.17 1337.1 1569.4 795.95 686.55 TRUE FALSE 1425.666908 1520.147104 1373.482925 2002.503608 1283.360392 1029.326664 1247.904499 1555.678901 878.6918508 771.6049972 1.847664171 1.970110497 1.780033735 2.595244478 1.663234941 1.334007254 1.617284107 2.016159702 1.138784552 1 9.591718677 -6.508527307 24.53087465 1.497188432 2.036736425 0.433693232 0.332271993 559.7763178 956825.9552 0.102957994 0.112399422 3.10E-07 6.508527307 0.539547993 TTFDEAMADLHT(ph)LSEDSYK ddPTM_A459_MK2206_30min_R1 1 TTFDEAMADLHTLSEDSYK 19 0 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 1 TTFDEAMADLHT(0.904)LS(0.081)EDS(0.015)YK 111.35 0.00083722 3014600 1913.5 1951 2144.3 1680.6 1573.7 1723.4 2067.7 1709.9 2488.2 3045.3 TRUE FALSE 1750.746777 1823.989545 1998.75089 1810.040103 1511.016197 1820.977419 1929.767506 1694.950525 2746.857294 3422.574755 0.511529156 0.53292906 0.583990426 0.528853344 0.441485228 0.532048983 0.56383502 0.495226736 0.80257043 1 11.74086634 -8.459175913 2.886313602 0.998030181 0.524491209 0.943022963 0.038540958 0.051579583 0.912328474 0.038812805 0.010433149 3.47E-09 8.459175913 -0.473538971 TTFDEAMADLHTLSEDSYK ddPTM_A459_MK2206_30min_R1 4 TTFDEAMADLHTLSEDSYK 19 0 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 0 ;;; 145.91 6.83E-05 22130100 8139.5 7730.77 7657.03 7431.16 7182.06 7755.05 8303.01 7918.76 7084.6 7048.43 FALSE TRUE 7447.192783 7227.495468 7137.292137 8003.509231 6895.983342 8194.134229 7749.131353 7849.527116 7821.069522 7921.642721 0.940107127 0.91237332 0.900986372 1.010334537 0.870524408 1.034398359 0.978222778 0.990896383 0.987303997 1 12.95158392 -6.772512229 24.99926682 0.996348977 0.929259523 0.491031565 0.036230317 194.9691311 440180.8237 0.012215763 0.010871434 1.69E-07 6.772512229 -0.067089454 TTFS(ph)PPVVAATVK ddPTM_A459_MK2206_30min_R2 2 TTFSPPVVAATVK 13 0 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 T(0.001)TFS(0.999)PPVVAATVK;T(0.206)T(0.007)FS(0.788)PPVVAATVK 180.3 0.00011186 8472600 65880 67904 62391 70355 62103 59309 69516 50345 56447 61916 TRUE FALSE 70923.82345 64531.9861 64471.0848 64606.77145 59664.52418 61566.04555 60388.4657 56925.26436 61356.65803 59895.68599 1.1841224 1.077406244 1.076389455 1.078654838 0.996140593 1.027887811 1.008227299 0.950406752 1.024391941 1 15.87016448 -1.522878745 0.356567151 0.98673743 3.278276173 0.811275457 0.026738627 25.38229255 0.355393724 0.02186863 39.34920693 0.03 1.522878745 2.291538743 TTGIVMDSGDGVT(ph)HTVPIYEGYALPHAILR ddPTM_A459_MK2206_30min_R1 1 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 P60709;A0A2R8Y793;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 TTGIVMDS(0.032)GDGVT(0.484)HT(0.484)VPIYEGYALPHAILR 91.202 7.21E-07 257820000 710.29 744.37 726.31 710.48 874.93 855.68 779.98 796.6 430.31 364.42 TRUE FALSE 649.8761056 695.9113777 677.0101008 765.2012927 840.0796854 904.1278621 727.9489574 789.6354102 475.0422644 409.5671008 1.586739033 1.699138862 1.65298946 1.868317282 2.051140543 2.207520722 1.777361892 1.927975681 1.159864314 1 8.677956023 -8.331372559 4.321972464 1.020501055 1.853115831 0.748463832 0.178272193 0.119162952 4.112558555 0.187863695 0.050302722 4.66E-09 8.331372559 0.832614776 TTGIVMDSGDGVTHTVPIYEGYALPHAILR ddPTM_A459_MK2206_30min_R1 4 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 P60709;A0A2R8Y793;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 0 ;;; 210.31 2.89E-54 287523000 8891.5 9186.8 9032.6 8727.3 10427.4 9866.6 9353.5 9472.6 6109.4 5569.75 FALSE TRUE 8135.231234 8588.73765 8419.492278 9399.478158 10012.05458 10425.23837 8729.545081 9389.782057 6744.493993 6259.772679 1.299604898 1.372052643 1.345015659 1.50156861 1.599427821 1.665434018 1.39454666 1.500019655 1.077434332 1 12.61189455 -10.15702495 8.56158369 1.000005281 1.430687636 0.385198169 0.157310094 0 0 0.157450189 0.03818728 6.97E-11 10.15702495 0.430682355 TTGIVMDSGDGVTHTVPIYEGYALPHAILR ddPTM_A459_MK2206_30min_R2 1 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 P60709;A0A2R8Y793;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 0 141.15 1.50E-18 4302600 4761.4 10496 6645.1 9794.1 9707.6 11643 12544 9359.1 8564.7 7776.7 FALSE TRUE 5125.936445 9974.783903 6866.644317 8993.8907 9326.430847 12086.08252 10896.95773 10582.3665 9309.642125 7522.946916 0.68137347 1.325914434 0.912759906 1.195527604 1.239731046 1.60656225 1.448495896 1.406678343 1.237499377 1 12.87708219 -6.120064398 2.125232191 1.370502551 1.007461536 0.336538016 0.212372826 0.346676329 3.084944336 0.066770365 0.095541876 7.58E-07 6.120064398 -0.363041015 TTGT(ph)PPDSSLVTYELHSRPEQDK ddPTM_A459_MK2206_30min_R1 1 TTGTPPDSSLVTYELHSRPEQDK 23 1 Q13561;Q13561-3;Q13561-2;H0YI98;F8VW18;F8W1I6 Q13561 DCTN2 Dynactin subunit 2 1 T(0.315)T(0.315)GT(0.367)PPDS(0.002)S(0.002)LVTYELHSRPEQDK 79.462 0.00035932 9053600 3094 2978.2 3389.4 2774.8 2622.1 2544.6 2964.3 2447.1 2680.6 2798.7 TRUE FALSE 2830.839053 2784.318639 3159.336971 2988.515577 2517.656205 2688.673053 2766.556956 2425.705263 2959.257963 3145.424085 0.899986449 0.885196579 1.004423215 0.950115309 0.800418683 0.854788728 0.879549746 0.771185442 0.940813665 1 11.61903883 -6.234001932 24.51634855 0.862289626 0.936341758 0.145234555 0.068098951 905.2982235 808915.9649 0.019397512 0.02503576 5.83E-07 6.234001932 0.074052131 TTGT(ph)PPDSSLVTYELHSRPEQDK ddPTM_A459_MK2206_30min_R2 1 TTGTPPDSSLVTYELHSRPEQDK 23 1 Q13561;Q13561-3;Q13561-2;H0YI98;F8VW18;F8W1I6 Q13561 DCTN2 Dynactin subunit 2 1 T(0.18)T(0.18)GT(0.641)PPDSSLVTYELHSRPEQDK 103.35 1.68E-05 8393700 63591 58659 57038 69161 56472 49568 67740 64898 51428 70193 TRUE FALSE 68459.57585 55746.07936 58939.61845 63510.32506 54254.62553 51454.34497 58845.65663 73380.39143 55901.11448 67902.60816 1.008202449 0.820971107 0.868002276 0.935314958 0.799006504 0.757766842 0.866618503 1.080671176 0.823254305 1 16.05117937 -10.72124725 5.126782278 1.000009119 0.882581639 0.119750412 0.093886827 9.97E-06 1.56E-06 0.092644001 0.022467726 1.90E-11 10.72124725 -0.11742748 TTHFVEGGDAGNR ddPTM_A459_MK2206_30min_R2 3 TTHFVEGGDAGNR 13 0 A8MUD9;P18124 A8MUD9 RPL7 60S ribosomal protein L7 0 ;; 112.5 0.0068697 13360400 114601 90827 83793 114087 96843 90018 122203 95871 79429 119064 FALSE TRUE 123374.9407 86316.66325 86586.6168 104765.7272 93040.45722 93443.69807 106157.5993 108401.6689 86337.59085 115178.9514 1.071158742 0.749413519 0.751757294 0.909590909 0.807790452 0.811291446 0.921675341 0.941158671 0.749595215 1 16.81351757 -7.265965009 24.40281739 0.898203861 0.841889058 0.053161504 0.105245204 917.571272 4947632.157 0.041930209 0.029361534 5.42E-08 7.265965009 -0.056314803 TTHFVEGGDAGNREDQINR ddPTM_A459_MK2206_30min_R1 3 TTHFVEGGDAGNREDQINR 19 1 A8MUD9;P18124 A8MUD9 RPL7 60S ribosomal protein L7 0 ;; 81.713 0.015683 86271100 3908.81 3777.39 3764.95 3007.26 4117.5 3962.42 4029.57 3645.51 3044.58 3126.24 FALSE TRUE 3576.345184 3531.481224 3509.395684 3238.879686 3953.491256 4186.768796 3760.764738 3613.63769 3361.074986 3513.542213 1.017874546 1.005105677 0.998819844 0.921827458 1.125215243 1.191609078 1.070362759 1.02848848 0.956605836 1 11.77871052 -6.266345321 24.99424396 1.070365223 0.988200578 0.238466699 0.065604279 639.8158695 3259655.571 0.021998419 0.025745945 5.42E-07 6.266345321 -0.082164645 TTHLAGALS(ph)PGEAWPFESV ddPTM_A459_MK2206_30min_R1 3 TTHLAGALSPGEAWPFESV 19 0 Q9Y3X0 Q9Y3X0 CCDC9 Coiled-coil domain-containing protein 9 1 TTHLAGALS(0.99)PGEAWPFES(0.01)V;TTHLAGALS(0.999)PGEAWPFESV;TTHLAGALS(0.987)PGEAWPFES(0.012)V 113.52 0.00052725 94131000 9951.6 10010.1 9506.2 8911.9 9463.1 8547.8 10429.1 8546.2 8575.2 7803.4 TRUE FALSE 9105.164162 9358.440671 8860.94563 9598.296082 9086.164689 9031.769049 9733.393768 8471.481474 9466.622727 8770.144105 1.038200063 1.067079464 1.010353482 1.094428548 1.036033682 1.029831316 1.109832821 0.965945528 1.07941473 1 13.09838483 -10.33227646 0.380549085 0.982447098 1.050891373 0.106555476 0.040229627 26.62852623 3.130187162 0.57967287 0.027016283 4.65E-11 10.33227646 0.068444275 TTHLAGALS(ph)PGEAWPFESV ddPTM_A459_MK2206_30min_R2 2 TTHLAGALSPGEAWPFESV 19 0 Q9Y3X0 Q9Y3X0 CCDC9 Coiled-coil domain-containing protein 9 1 TT(0.001)HLAGALS(0.999)PGEAWPFESV;TTHLAGALS(1)PGEAWPFESV 103.77 0.00096966 56617900 91174.4 133534.6 97960.5 135203 129584.4 129366.9 144488.2 109090.5 104658.2 120591.7 TRUE FALSE 98154.78217 126903.4659 101226.4542 124156.4824 124496.2653 134290.048 125516.7258 123349.0029 113761.1811 116656.8027 0.841397843 1.087835968 0.867728686 1.064288404 1.067201076 1.151154883 1.075948619 1.057366566 0.975178287 1 16.83191091 -3.529855178 0.710223625 1.057363882 4.87E-11 0.327399526 0.076933998 18.11784536 1.759468595 0.030467881 23.03789916 0.000295219 3.529855178 -1.057363882 TTHLAGALS(ph)PGGGQSAPAFPESGPSLR ddPTM_A459_MK2206_30min_R1 3 TTHLAGALSPGGGQSAPAFPESGPSLR 27 0 A0A2R8Y4Z8 A0A2R8Y4Z8 1 TTHLAGALS(1)PGGGQSAPAFPESGPSLR;TTHLAGALS(1)PGGGQSAPAFPESGPSLR;TTHLAGALS(1)PGGGQSAPAFPESGPSLR 124.9 4.98E-12 68121000 6678.6 6442.8 6188.7 5583.1 6306.2 6263.4 6350.6 5930.5 5345.7 5237.9 TRUE FALSE 6110.549999 6023.372549 5768.628287 6013.111329 6055.0107 6618.028295 5926.963061 5878.650264 5901.404645 5886.810596 1.038006897 1.023197953 0.979924221 1.021454866 1.028572366 1.12421288 1.00682075 0.998613794 1.00247911 1 12.5232705 -7.496105114 24.99253492 1.000871283 1.034595437 0.196404216 0.033733012 1361.066976 1270528.467 0.015361094 0.010321706 3.19E-08 7.496105114 0.033724154 TTHLAGALS(ph)PGGGQSAPAFPESGPSLR ddPTM_A459_MK2206_30min_R2 2 TTHLAGALSPGGGQSAPAFPESGPSLR 27 0 A0A2R8Y4Z8 A0A2R8Y4Z8 1 T(0.001)THLAGALS(0.994)PGGGQS(0.005)APAFPESGPSLR;TTHLAGALS(1)PGGGQSAPAFPESGPSLR 123.99 5.05E-12 105817000 49822 67196 57447 73303 69629 61555 72156 50156 50491 52760 TRUE FALSE 53636.41063 63859.14435 59362.25431 67313.91042 66895.0156 63897.51866 62681.83053 56711.56141 54882.61591 51038.44552 1.050902121 1.251196891 1.163088995 1.318886375 1.310678939 1.251948761 1.228129695 1.111153775 1.075319112 1 15.63929677 -8.057240348 1.683903774 1.018101993 1.232962048 0.521249336 0.073821177 0.305322163 1.546127064 0.067705881 0.021825835 8.77E-09 8.057240348 0.214860055 TTHLAGALSPGEAWPFES(ph)V ddPTM_A459_MK2206_30min_R1 1 TTHLAGALSPGEAWPFESV 19 0 Q9Y3X0 Q9Y3X0 CCDC9 Coiled-coil domain-containing protein 9 1 TTHLAGALS(0.027)PGEAWPFES(0.973)V 74.611 0.0097798 39310000 5347.2 5391.7 5193.6 4409 5206.9 4423.5 4870.3 4843.2 4383 4170.9 TRUE FALSE 4892.392561 5040.69935 4841.072902 4748.581944 4999.498147 4673.954747 4545.411173 4800.856413 4838.628535 4687.622581 1.04368312 1.075321074 1.032735213 1.013004324 1.066531714 0.997084272 0.96966236 1.024155919 1.032213761 1 12.1946407 -6.774072698 24.99916448 1.003947943 1.045271498 0.463792021 0.022363685 228.5484869 452254.7282 0.008347062 0.007409721 1.68E-07 6.774072698 0.041323555 TTHS(ph)PYEER ddPTM_A459_MK2206_30min_R1 2 TTHSPYEER 9 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 T(0.419)T(0.046)HS(0.535)PYEER;T(0.1)T(0.008)HS(0.892)PYEER 143.89 0.001994 66251000 12898 13154.9 12250.6 11578.4 13061.7 11931.1 12614.5 12510.8 5480.3 9267.2 TRUE FALSE 11800.95737 12298.51362 11419.0634 12470.17037 12541.42483 12606.62857 11773.00972 12401.41939 6049.996796 10415.2907 1.133041574 1.180813284 1.09637491 1.19729451 1.204135841 1.210396228 1.130358245 1.190693544 0.580876422 1 13.34641549 -8.242568227 24.9968986 0.790438215 1.168289933 0.694559066 0.100121545 341.9860401 452999.4867 0.061254607 0.023068483 5.72E-09 8.242568227 0.377851719 TTIFS(ph)PEGR ddPTM_A459_MK2206_30min_R1 1 TTIFSPEGR 9 0 H0YLS6;H0YLC2;H0YMI6;H0YMA1;H0YMZ1;H0YL69;P25789 H0YLS6 PSMA4 Proteasome subunit alpha type;Proteasome subunit alpha type-4 1 T(0.01)T(0.052)IFS(0.937)PEGR 93.442 0.027915 0 1990.4 1924.7 1871.2 1584.1 2290.6 1903.9 2636.7 2226 1570.7 1577.1 TRUE FALSE 1821.106028 1799.40168 1744.188157 1706.107656 2199.360552 2011.697173 2460.810554 2206.538317 1733.979886 1772.483054 1.027432123 1.015186958 0.984036577 0.962552309 1.240835869 1.13495989 1.388340807 1.244885423 0.978277271 1 10.79155612 -6.257880574 24.96491125 1.186504197 0.997631953 0.329860583 0.114240559 327.5848448 2297998.553 0.034384428 0.04261881 5.52E-07 6.257880574 -0.188872243 TTIFS(ph)PEGR ddPTM_A459_MK2206_30min_R2 1 TTIFSPEGR 9 0 H0YLS6;H0YLC2;H0YMI6;H0YMA1;H0YMZ1;H0YL69;P25789 H0YLS6 PSMA4 Proteasome subunit alpha type;Proteasome subunit alpha type-4 1 T(0.392)T(0.051)IFS(0.557)PEGR 87.713 0.032155 6438400 23590 26217 27099 30401 28077 33368 32214 22413 25608 28660 TRUE FALSE 25396.06854 24915.1019 28002.46713 27917.14105 26974.5559 34637.84262 27984.2631 25342.45606 27835.33755 27724.82655 0.916004596 0.898656728 1.010014151 1.006936545 0.972938671 1.249343889 1.009357554 0.91407086 1.003985994 1 14.75889081 -5.312534603 4.288302805 1.024437595 0.906242532 0.23468196 0.081987031 0.309216202 12.1692148 0.023231143 0.054092838 4.87E-06 5.312534603 -0.118195064 TTIPEEEEEEEEAAGVVVEEELFHQQGT(ph)PR ddPTM_A459_MK2206_30min_R1 4 TTIPEEEEEEEEAAGVVVEEELFHQQGTPR 30 0 P20700 P20700 LMNB1 Lamin-B1 1 TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR 137.65 6.64E-18 59569600 7082.49 7239.08 6885.58 6067.42 7529.65 6522.45 6971.78 7287 6170.84 5554.19 TRUE FALSE 6480.087034 6767.814576 6418.206014 6534.73374 7229.728096 6891.745482 6506.705277 7223.290527 6812.320901 6242.284989 1.038095352 1.084188657 1.028182152 1.046849631 1.158186162 1.104042109 1.042359535 1.157154878 1.091318469 1 12.60785851 TTIPEEEEEEEEAAGVVVEEELFHQQGT(ph)PR ddPTM_A459_MK2206_30min_R2 1 TTIPEEEEEEEEAAGVVVEEELFHQQGTPR 30 0 P20700 P20700 LMNB1 Lamin-B1 1 TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR 130.38 1.04E-17 2431000 10998 13095 11702 14075 14497 15877 13914 11246 12638 13006 TRUE FALSE 11840.01534 12444.72134 12092.13884 12925.02748 13927.77494 16481.21036 12087.07509 12715.89081 13737.2304 12581.61529 0.941056857 0.989119526 0.961095898 1.027294762 1.106994183 1.309943913 0.960693425 1.01067236 1.091849503 1 13.61902953 -5.978497262 3.498510242 1.085448056 0.966922996 0.249807087 0.089828713 0.351477356 9.154216568 0.028258193 0.041867334 1.05E-06 5.978497262 -0.118525061 TTKPPYPGS(ph)PVK ddPTM_A459_MK2206_30min_R1 2 TTKPPYPGSPVK 12 1 Q96T17-5;Q96T17;Q96T17-2;Q96T17-4 Q96T17-5 MAP7D2 MAP7 domain-containing protein 2 1 TTKPPYPGS(1)PVK;TTKPPYPGS(1)PVK 159.41 0.0021986 20643900 11040.8 10769.1 10843.3 8800.8 7788 7848.9 9419.2 8650.1 10732.3 11575.9 TRUE FALSE 10101.72198 10068.02963 10107.28701 9478.639141 7477.787469 8293.297935 8790.862354 8574.473088 11847.96099 13010.00989 0.776457672 0.773867946 0.776885421 0.728565099 0.574771851 0.63745516 0.675699898 0.659067377 0.910680399 1 13.66733444 -8.402153219 3.786697075 0.996124643 0.699416991 0.724399503 0.063847298 0.129129774 3.086818909 0.070256743 0.018570872 3.96E-09 8.402153219 -0.296707652 TTKPPYPGS(ph)PVK ddPTM_A459_MK2206_30min_R2 1 TTKPPYPGSPVK 12 1 Q96T17-5;Q96T17;Q96T17-2;Q96T17-4 Q96T17-5 MAP7D2 MAP7 domain-containing protein 2 1 T(0.006)T(0.001)KPPY(0.002)PGS(0.991)PVK 65.652 0.042713 72643000 142740 111240 105980 95622 114340 72616 146180 111140 69659 141210 TRUE FALSE 153668.2841 105715.9834 109513.3203 87809.37672 109850.4371 75379.45276 126986.3904 125666.3796 75717.81391 136602.3293 1.124931654 0.773895906 0.801694385 0.642810245 0.804162255 0.551816746 0.929606333 0.919943168 0.554293725 1 17.05962256 -4.761219413 7.255498566 0.76785428 1.131597391 0.338962108 0.146139113 0.117231332 39.65093083 0.034731701 0.209428295 1.73E-05 4.761219413 0.363743111 TTKS(ph)PSDSGYSYETIGK ddPTM_A459_MK2206_30min_R1 2 TTKSPSDSGYSYETIGK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.186)T(0.051)KS(0.643)PS(0.12)DSGYSYETIGK;T(0.015)T(0.018)KS(0.776)PS(0.175)DS(0.015)GYS(0.001)YETIGK 99.569 0.0026043 828500000 13297.4 14293.5 13966.7 13055.2 12799 10387.6 12452.2 12962.5 11067.8 8694.4 TRUE FALSE 12166.3863 13362.99055 13018.67932 14060.71377 12289.18873 10975.73694 11621.53646 12849.17023 12218.33742 9771.527911 1.245085355 1.36754361 1.332307438 1.438947306 1.257652727 1.123236513 1.189326435 1.314960193 1.250401936 1 13.25436845 -6.516336643 23.90886595 1.195497263 1.346756403 0.438110694 0.089577807 177.0900215 647200.5025 0.028776458 0.029831047 3.05E-07 6.516336643 0.151259141 TTKS(ph)PSDSGYSYETIGK ddPTM_A459_MK2206_30min_R2 4 TTKSPSDSGYSYETIGK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.001)TKS(0.852)PS(0.13)DS(0.016)GYS(0.001)YETIGK;T(0.096)T(0.023)KS(0.556)PS(0.292)DS(0.032)GYS(0.001)YETIGK;T(0.274)T(0.274)KS(0.413)PS(0.037)DS(0.001)GYSYETIGK;T(0.05)T(0.05)KS(0.852)PS(0.044)DS(0.004)GYSYETIGK 194.32 4.25E-07 1378350000 424373 510645 489140 553868 582768 395437 627406 450650 419626 517258 TRUE FALSE 456863.3232 485287.1118 505447.6835 508615.2127 559885.6001 410485.6321 545026.8386 509551.5023 456124.311 500379.9138 0.913032899 0.969837314 1.010127844 1.016458092 1.118921013 0.820347941 1.089226053 1.01832925 0.911555996 1 18.93266435 -4.850377572 2.674197647 1.000477876 0.902728066 0.095720178 0.079354164 0.940732765 10.08945461 0.019957755 0.194314636 1.41E-05 4.850377572 -0.09774981 TTKSPS(ph)DSGYSYETIGK ddPTM_A459_MK2206_30min_R2 1 TTKSPSDSGYSYETIGK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.067)T(0.067)KS(0.033)PS(0.805)DS(0.029)GYSYETIGK 84.03 0.0069404 535450000 86693 102930 97652 102710 112040 88869 130810 90814 79562 97173 TRUE FALSE 93330.28274 97818.64587 100907.6689 94318.26445 107640.7466 92250.97207 113634.4899 102683.7016 86482.15894 94002.25297 0.992851552 1.040598951 1.073460111 1.003361744 1.145086881 0.981369799 1.208848578 1.092353623 0.920000917 1 16.52040771 -4.779551943 2.399674127 1.061047679 0.976328051 0.041091107 0.079602513 1.79380675 12.65599374 0.020312044 0.322022313 1.66E-05 4.779551943 -0.084719628 TTKT(ph)PEDGDYSYEIIEK ddPTM_A459_MK2206_30min_R1 1 TTKTPEDGDYSYEIIEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.022)T(0.026)KT(0.951)PEDGDYS(0.001)YEIIEK 100.19 0.0062115 62989000 3881.1 4071.6 4672.2 3414 2502.8 2863.7 2880.5 3128.7 3110.5 2848.9 TRUE FALSE 3550.992065 3806.5381 4355.064081 3676.946872 2403.108176 3025.840219 2688.347101 3101.346106 3433.847606 3201.84324 1.109046196 1.188858359 1.360174048 1.148384414 0.750538985 0.945030719 0.839624835 0.968612725 1.072459627 1 11.64468696 -6.071743688 7.028998308 0.925107591 1.222578253 0.643641631 0.100221657 0.157786422 13.29842713 0.030123623 0.039221874 8.48E-07 6.071743688 0.297470661 TTKT(ph)PEDGDYSYEIIEK ddPTM_A459_MK2206_30min_R2 1 TTKTPEDGDYSYEIIEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.033)T(0.033)KT(0.934)PEDGDYSYEIIEK 118.71 0.0021232 59527000 290840 278320 243080 250750 300200 188540 355870 250030 200720 354220 TRUE FALSE 313106.934 264499.0335 251184.1659 230262.9229 288412.6396 195715.0218 309143.8415 282709.7795 218178.2628 342661.8304 0.913749085 0.771895233 0.733038067 0.671982994 0.841683006 0.571160849 0.902183477 0.825040184 0.636715979 1 18.38642597 -10.79330084 5.264299917 1.000034297 0.762333248 0.306816347 0.106842304 4.15E-05 5.75E-06 0.09978875 0.024198839 1.61E-11 10.79330084 -0.237701049 TTNESLLTS(ph)FPK ddPTM_A459_MK2206_30min_R2 2 TTNESLLTSFPK 12 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 TTNESLLT(0.187)S(0.813)FPK;TTNESLLT(0.022)S(0.978)FPK 189.99 0.00013335 14983200 124949 106934 113600 101928 108134 81212 114066 81436 83498 98497 TRUE FALSE 134515.1915 101623.8131 117387.3673 93600.15635 103888.1158 84302.57957 99088.99718 92079.96481 90760.50511 95283.05096 1.411743119 1.06654659 1.231985816 0.982337944 1.090310551 0.884759448 1.039943581 0.966383464 0.952535673 1 16.53993199 -1.522878745 0.500518884 0.972001433 13.66453534 0.697591726 0.080680282 57.60938646 0.611275832 0.041411128 769.0224101 0.03 1.522878745 12.69253391 TTNS(ph)SLEEIMDK ddPTM_A459_MK2206_30min_R2 1 TTNSSLEEIMDK 12 0 Q709C8-4;Q709C8-2;Q709C8-3;Q709C8 Q709C8-4 VPS13C Vacuolar protein sorting-associated protein 13C 1 T(0.001)T(0.001)NS(0.661)S(0.337)LEEIMDK 150.05 0.00055966 2778400 27140 23388 19343 17851 15202 17793 19498 19246 17066 18952 TRUE FALSE 29217.85927 22226.58593 19987.88597 16392.5162 14605.0931 18470.12508 16937.88918 21761.51828 18550.36983 18333.59779 1.593678426 1.212341744 1.090232599 0.894124349 0.79662995 1.007446836 0.923871537 1.186974784 1.011823759 1 14.16220231 -4.749645348 1.507788672 0.977588477 1.863904203 0.786455752 0.097785663 0.585177838 1.177436482 0.03051448 0.798616371 1.78E-05 4.749645348 0.886315726 TTPATGEQS(ph)PGAR ddPTM_A459_MK2206_30min_R1 2 TTPATGEQSPGAR 13 0 O00308-4;O00308-2;O00308 O00308-4 WWP2 NEDD4-like E3 ubiquitin-protein ligase WWP2 1 TTPATGEQS(1)PGAR;TTPATGEQS(1)PGAR 147.39 0.00057465 120063000 7847.9 7552.7 7400.6 6663.7 7789.1 7340 8774.1 7572.3 7609.1 6656.1 TRUE FALSE 7180.394894 7061.017857 6898.267891 7176.939329 7478.843653 7755.584457 8188.795798 7506.096179 8400.093174 7480.707919 0.959854999 0.943897013 0.922141055 0.959393069 0.99975079 1.036744723 1.094655197 1.003393831 1.122900836 1 12.86895909 -6.514373714 1.826546874 1.056400348 0.942255573 0.659449609 0.035837608 0.196923358 1.325387824 0.012730924 0.013943192 3.06E-07 6.514373714 -0.114144776 TTPATGEQS(ph)PGAR ddPTM_A459_MK2206_30min_R2 4 TTPATGEQSPGAR 13 0 O00308-4;O00308-2;O00308 O00308-4 WWP2 NEDD4-like E3 ubiquitin-protein ligase WWP2 1 TTPATGEQS(1)PGAR;TTPATGEQS(1)PGAR;TTPAT(0.001)GEQS(0.999)PGAR;T(0.001)TPAT(0.003)GEQS(0.996)PGAR 140.03 0.00090327 195247000 78346.9 99458 81263.7 104975.5 95999 103258.4 113327.2 85067.9 93171.3 97851.4 TRUE FALSE 84345.1989 94519.06035 83972.9912 96398.66585 92229.5969 107187.9708 98447.20251 96186.56661 101275.1713 94658.51683 0.891047121 0.998526741 0.887115011 1.018383438 0.974340186 1.132364782 1.040024773 1.016142761 1.069900255 1 16.5304447 -6.135946328 1.777850048 1.048758279 0.934145132 0.492210773 0.050289006 0.294724205 1.846141258 0.016447999 0.024092589 7.31E-07 6.135946328 -0.114613146 TTPES(ph)PPYSSGSYDSIK ddPTM_A459_MK2206_30min_R1 2 TTPESPPYSSGSYDSIK 17 0 A0A087WTU5;A0A087X0N3;Q96MY1-2;Q96MY1 A0A087WTU5 NOL4L Nucleolar protein 4-like 1 T(0.001)TPES(0.999)PPYSSGSYDSIK;T(0.262)T(0.001)PES(0.736)PPYSSGSYDSIK 266.44 5.84E-42 91120000 8516.7 9017.8 8929.7 7064.3 8396.1 7167.7 8379.4 8059.6 7959.7 7265.4 TRUE FALSE 7792.309942 8430.739581 8323.576844 7608.39361 8061.665558 7573.52898 7820.425515 7989.135767 8787.139299 8165.492603 0.954297594 1.032483892 1.019360037 0.931773988 0.987284656 0.927504236 0.957740812 0.97840218 1.076130948 1 12.99532421 -8.164946096 7.857816919 1.037709723 0.973871943 0.335994856 0.036273828 0.316123273 22.48682544 0.025442156 0.009532108 6.84E-09 8.164946096 -0.06383778 TTPES(ph)PPYSSGSYDSIK ddPTM_A459_MK2206_30min_R2 1 TTPESPPYSSGSYDSIK 17 0 A0A087WTU5;A0A087X0N3;Q96MY1-2;Q96MY1 A0A087WTU5 NOL4L Nucleolar protein 4-like 1 T(0.024)T(0.03)PES(0.696)PPY(0.063)S(0.15)S(0.027)GS(0.009)Y(0.001)DS(0.001)IK 102.08 0.003725 47587000 19243 22890 21615 22798 23525 21010 23750 18158 18453 21253 TRUE FALSE 20716.25888 21753.31589 22335.63331 20935.33047 22601.2903 21809.55027 20631.59647 20531.31295 20058.00858 20559.51635 1.007623843 1.058065546 1.086389044 1.018279327 1.099310407 1.060800746 1.003505925 0.998628207 0.975607025 1 14.32751871 -7.334403733 4.109234366 0.992374877 1.057044832 0.558558332 0.02648997 0.173665373 5.662580021 0.011564278 0.007660242 4.63E-08 7.334403733 0.064669955 TTPPEAAQNGQS(ph)PMAALILVADNAGGSHASK ddPTM_A459_MK2206_30min_R2 3 TTPPEAAQNGQSPMAALILVADNAGGSHASK 31 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 T(0.017)T(0.017)PPEAAQNGQS(0.966)PMAALILVADNAGGSHASK;T(0.025)T(0.025)PPEAAQNGQS(0.951)PMAALILVADNAGGSHASK;T(0.002)T(0.002)PPEAAQNGQS(0.996)PMAALILVADNAGGSHASK 69.492 0.001503 0 18381 17093.4 14035.6 19804.8 16172 15890 19716.5 14237.1 13111.6 13643.2 TRUE FALSE 19788.26349 16244.56661 14503.5399 18186.68449 15537.00602 16494.70508 17127.69987 16097.93785 14252.02327 13198.0235 1.499335373 1.230833284 1.098917569 1.37798546 1.177222182 1.249786006 1.297747338 1.219723381 1.079860425 1 13.68803427 -14.52287874 0.072785102 0.119507682 1.542709384 0.453239057 0.103115304 302.256256 1.570998548 43.51059239 4.973533336 3.00E-15 14.52287874 1.423201703 TTPPESAPQNGPSPMAALMSVADTLGT(ph)AHSPK ddPTM_A459_MK2206_30min_R1 1 TTPPESAPQNGPSPMAALMSVADTLGTAHSPK 32 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 TTPPESAPQNGPSPMAALMS(0.012)VADT(0.087)LGT(0.558)AHS(0.343)PK 60.602 0.0025046 0 791.45 546.19 866.06 510.65 777.41 694.93 877.28 554.33 540.87 450.02 TRUE FALSE 724.1330214 510.6329317 807.2742602 549.9803515 746.4441135 734.2763361 818.7582519 549.4835513 597.095372 505.7718751 1.431738412 1.009611164 1.596123272 1.087407937 1.475851368 1.45179353 1.618829145 1.086425676 1.180562624 1 8.982343004 -10.47064169 6.989526032 0.999999986 1.327678573 0.177732539 0.210656659 4.63E-08 7.24E-09 0.199664584 0.048425772 3.38E-11 10.47064169 0.327678587 TTPPESAPQNGPSPMAALMSVADTLGTAHS(ph)PK ddPTM_A459_MK2206_30min_R1 2 TTPPESAPQNGPSPMAALMSVADTLGTAHSPK 32 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 TTPPESAPQNGPSPMAALMSVADT(0.002)LGT(0.008)AHS(0.99)PK;TTPPESAPQNGPS(0.036)PMAALMS(0.002)VADT(0.001)LGT(0.072)AHS(0.889)PK 115.32 1.33E-16 7181900 660.94 822.95 801.9 842.45 620.98 731.13 702.51 789.46 610.33 715.81 TRUE FALSE 604.7235823 769.3758054 747.4692622 907.335645 596.2450517 772.5259488 655.6468397 782.5578345 673.7759876 804.4899469 0.751685692 0.956352293 0.929121943 1.127839631 0.741146678 0.960267996 0.814984503 0.972737866 0.837519462 1 9.651930583 -6.294988809 24.9993583 0.886398046 0.941462632 0.05175285 0.112039907 2139.886879 1594530.418 0.033620616 0.038125011 5.07E-07 6.294988809 0.055064586 TTPPTQKPPS(ph)PPMSGK ddPTM_A459_MK2206_30min_R1 2 TTPPTQKPPSPPMSGK 16 1 H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;E9PEZ7;H7C3Q7 H0Y6B5;H7C3Q7 ABI2 Abl interactor 2 1 TTPPTQKPPS(0.831)PPMS(0.168)GK;TTPPTQKPPS(0.999)PPMS(0.001)GK 108.47 0.0017265 206950000 21842.3 26555.2 26283 23489.5 16516.4 14404.8 18332.4 20537.4 22195.8 20353.6 TRUE FALSE 19984.49769 24826.45165 24498.98319 25298.66536 15858.51681 15220.38733 17109.47905 20357.84368 24503.13284 22875.15763 0.873633223 1.085301883 1.070986421 1.105944963 0.693263717 0.665367539 0.747950214 0.889954247 1.071167825 1 14.48149406 -6.250321441 24.94198527 0.825319129 1.040277703 0.318258731 0.133863579 827.1557702 1855640.542 0.042108566 0.053845887 5.62E-07 6.250321441 0.214958574 TTPPTQKPPS(ph)PPMSGK ddPTM_A459_MK2206_30min_R2 2 TTPPTQKPPSPPMSGK 16 1 H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;E9PEZ7;H7C3Q7 H0Y6B5;H7C3Q7 ABI2 Abl interactor 2 1 TTPPT(0.008)QKPPS(0.915)PPMS(0.077)GK;TTPPT(0.002)QKPPS(0.9)PPMS(0.098)GK 73.984 0.01829 307640000 140350 165706 170929 144161 147931 86522 179017 130533 123990 162713 TRUE FALSE 151095.3039 157477.281 176627.6875 132382.5852 142122.4856 89814.65534 155511.8529 147594.1113 134774.4261 157403.6881 0.959922259 1.000467542 1.122131823 0.841038649 0.902917126 0.570600704 0.987980998 0.937678863 0.856234232 1 17.26410982 -5.779156342 24.9438738 0.862022028 1.024803253 0.263954042 0.119153175 300.6994817 423356.5718 0.034102145 0.050704949 1.66E-06 5.779156342 0.162781225 TTPS(ph)VVAFTADGER ddPTM_A459_MK2206_30min_R1 2 TTPSVVAFTADGER 14 0 P38646;A0A3B3ITI4;D6RJI2;D6RA73 P38646 HSPA9 "Stress-70 protein, mitochondrial" 1 T(0.036)T(0.036)PS(0.888)VVAFT(0.039)ADGER;T(0.09)T(0.084)PS(0.8)VVAFT(0.025)ADGER 103.13 0.0070996 9792800 1808.14 1862.2 1969.05 1410.35 1612.76 1713.61 1530.74 1520.78 1499.23 1419.14 TRUE FALSE 1654.348198 1740.970442 1835.396372 1518.975401 1548.520354 1810.633117 1428.627128 1507.483981 1655.080324 1594.953777 1.037238961 1.091549151 1.150752077 0.952363274 0.970887292 1.135226076 0.895716947 0.945158413 1.037697987 1 10.6392989 -5.768328255 24.99762647 0.989922443 1.093016975 0.339704364 0.065265176 180.4860637 654930.6742 0.018690732 0.028412142 1.70E-06 5.768328255 0.103094532 TTPS(ph)YVAFTDTER ddPTM_A459_MK2206_30min_R1 2 TTPSYVAFTDTER 13 0 P11142;E9PKE3;P11142-2;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PNE6;E9PI65;E9PPY6;E9PN25;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;P17066;P48741;Q53FA3;P34931 P11142;P54652;A0A0G2JIW1;P17066;Q53FA3 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA6;HSPA7;HSPA1L Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 1-like 1 T(0.002)T(0.002)PS(0.997)YVAFTDTER;T(0.313)T(0.054)PS(0.633)YVAFTDTER 207.64 1.08E-05 23413400 3734 3795.9 3567.4 2622.8 3885.7 3456.6 4342.2 3476.2 2586.5 2953.2 TRUE FALSE 3416.403692 3548.78622 3325.254827 2824.80851 3730.924341 3652.309705 4052.539761 3445.80795 2855.375931 3319.064712 1.029327232 1.069212724 1.001865018 0.851085699 1.124089063 1.100403283 1.220988475 1.038186432 0.860295348 1 11.69656104 -4.465817016 17.9935355 1.036280448 0.955387778 0 0.107142828 65365.10582 106565.0711 0.0272984 201279.1339 3.42E-05 4.465817016 -0.080892671 TTPSATSLPQTVVMT(ph)SPVTLTSQTTK ddPTM_A459_MK2206_30min_R2 1 TTPSATSLPQTVVMTSPVTLTSQTTK 26 0 P18846-2;P18846 P18846-2 ATF1 Cyclic AMP-dependent transcription factor ATF-1 1 TTPSATSLPQTVVMT(0.493)S(0.493)PVT(0.012)LT(0.001)S(0.001)QTTK 112.9 1.77E-08 3845000 33855 36419 37202 44557 43595 38433 45537 31979 37033 49991 TRUE FALSE 36446.96483 34610.48542 38442.29611 40916.55057 41883.24125 39895.59475 39557.9372 36158.7651 40254.0634 48359.79776 0.753662474 0.715687141 0.794922599 0.846086056 0.866075608 0.824974392 0.817992197 0.747702984 0.832386926 1 15.56152059 -14.52287875 0.229430222 2.051714805 0.778562679 0.658803749 0.043915265 115.0380964 1.148442149 56.2906625 0.0876026 3.00E-15 14.52287875 -1.273152127 TTPSATSLPQTVVMTS(ph)PVTLTSQTTK ddPTM_A459_MK2206_30min_R1 1 TTPSATSLPQTVVMTSPVTLTSQTTK 26 0 P18846-2;P18846 P18846-2 ATF1 Cyclic AMP-dependent transcription factor ATF-1 1 TTPSATSLPQTVVMT(0.233)S(0.765)PVT(0.002)LTSQTTK 98.289 0.00018682 0 1759.3 1588 1821.1 1461.7 1652.1 1623.9 1748.9 1675.8 1155.5 1440.1 TRUE FALSE 1609.662297 1484.620911 1697.488806 1574.280387 1586.293359 1715.843815 1632.234072 1661.148657 1275.61836 1618.51046 0.994533144 0.917276068 1.048796932 0.972672359 0.980094598 1.060137612 1.008479162 1.026344097 0.788143414 1 10.66045097 -8.227411495 24.96793723 0.89407153 1.000415295 0.329696042 0.061004768 574.6320502 421637.0751 0.038737885 0.014639934 5.92E-09 8.227411495 0.106343765 TTPSYVAFT(ph)DTER ddPTM_A459_MK2206_30min_R1 1 TTPSYVAFTDTER 13 0 P11142;E9PKE3;P11142-2;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PNE6;E9PI65;E9PPY6;E9PN25;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;P17066;P48741;Q53FA3;P34931 P11142;P54652;A0A0G2JIW1;P17066;Q53FA3 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA6;HSPA7;HSPA1L Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 1-like 1 TTPSYVAFT(0.999)DT(0.001)ER 165.51 2.11E-06 0 753.4 712.5 843.01 640.98 935.1 701.31 803.23 678.44 537.08 541.26 TRUE FALSE 689.3193737 666.1161205 785.78883 690.3483907 897.8529869 741.0175661 749.6479923 672.5084706 592.911388 608.3153751 1.133161189 1.095017729 1.291745799 1.134852774 1.475966289 1.218147028 1.232334448 1.105526012 0.97467763 1 9.248675658 -7.989376626 2.629266896 0.988006884 1.22982096 0.473971076 0.100997435 0.262460664 3.471509423 0.080408518 0.028666122 1.02E-08 7.989376626 0.241814076 TTPSYVAFTDT(ph)ER ddPTM_A459_MK2206_30min_R2 2 TTPSYVAFTDTER 13 0 P11142;E9PKE3;P11142-2;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PNE6;E9PI65;E9PPY6;E9PN25;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;P17066;P48741;Q53FA3;P34931 P11142;P54652;A0A0G2JIW1;P17066;Q53FA3 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA6;HSPA7;HSPA1L Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 1-like 1 TTPSYVAFT(0.184)DT(0.816)ER;TTPSYVAFT(0.078)DT(0.922)ER 187.74 0.00028476 15193800 33338 38714 28244 38359 33026 37683 35641 37823 30785 32133 TRUE FALSE 35890.38291 36791.51906 29185.64086 35224.947 31729.2333 39117.05297 30961.29389 42766.59597 33462.62365 31084.50284 1.154606947 1.183596831 0.938912905 1.133199626 1.020741218 1.258410121 0.996036322 1.375817274 1.07650503 1 14.92390788 -6.74066178 24.99970119 1.155760068 1.086049028 0.040039369 0.125447028 710.7962707 855232.1855 0.039454798 0.039413794 1.82E-07 6.74066178 -0.06971104 TTPSYVAFTDTER ddPTM_A459_MK2206_30min_R1 2 TTPSYVAFTDTER 13 0 P11142;E9PKE3;P11142-2;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PNE6;E9PI65;E9PPY6;E9PN25;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;P17066;P48741;Q53FA3;P34931 P11142;P54652;A0A0G2JIW1;P17066;Q53FA3 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA6;HSPA7;HSPA1L Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 1-like 0 ; 262.07 1.04E-28 61051000 2460.08 2947.4 3215 2826.4 2440.8 2489.4 2612 2799.5 3055.4 2693.1 FALSE TRUE 2250.837278 2755.523724 2996.774758 3044.089818 2343.577768 2630.347677 2437.758246 2775.024267 3373.019764 3026.74156 0.743650303 0.9103928 0.990099319 1.005731661 0.774290676 0.869036099 0.805406804 0.916835551 1.114406267 1 11.56354978 -8.125837653 5.227964538 1.054160251 0.877627311 0.42907714 0.084182564 0.228431925 8.54673385 0.062511909 0.02265861 7.48E-09 8.125837653 -0.17653294 TTPSYVAFTDTER ddPTM_A459_MK2206_30min_R2 4 TTPSYVAFTDTER 13 0 P11142;E9PKE3;P11142-2;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PNE6;E9PI65;E9PPY6;E9PN25;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;P17066;P48741;Q53FA3;P34931 P11142;P54652;A0A0G2JIW1;P17066;Q53FA3 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA6;HSPA7;HSPA1L Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 1-like 0 ;;; 255.52 1.36E-22 95393000 90412 101697 100907 118530 115012 106912 116202 99806 96123 103063 FALSE TRUE 97334.01224 96646.87486 104271.189 108845.7198 110496.051 110980.6111 100944.5378 112850.9869 104483.6048 99700.06275 0.976268315 0.969376269 1.04584878 1.091731708 1.108284668 1.113144847 1.012482189 1.131904873 1.047979328 1 16.60530679 -5.385495424 3.173870806 1.07816676 0.971500142 0.473980738 0.04083408 0.191623041 3.593146805 0.010575037 0.02558497 4.12E-06 5.385495424 -0.106666619 TTPTLGLEEVLSS(ph)R ddPTM_A459_MK2206_30min_R1 1 TTPTLGLEEVLSSR 14 0 O43474-4;O43474-1;O43474 O43474-4 KLF4 Krueppel-like factor 4 1 T(0.366)T(0.007)PTLGLEEVLS(0.035)S(0.593)R 76.868 0.041339 1999200 914.27 584.42 688.46 557.39 1207.6 1065.8 1193 1106.4 544.22 566.35 TRUE FALSE 836.5065355 546.3741518 641.7292534 600.3202744 1159.498735 1126.144675 1113.417147 1096.726861 600.7936165 636.5137137 1.314200334 0.858385515 1.008193916 0.943138005 1.821639833 1.769238668 1.749242982 1.723021575 0.943881653 1 9.314047787 -6.249081063 24.73398029 1.563128869 1.017023729 0.338781105 0.314501468 669.0598653 1339058.095 0.092016832 0.117913592 5.64E-07 6.249081063 -0.54610514 TTPVDLCLLEESVGS(ph)LEGSR ddPTM_A459_MK2206_30min_R1 1 TTPVDLCLLEESVGSLEGSR 20 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 TTPVDLCLLEES(0.001)VGS(0.998)LEGS(0.001)R 188.34 1.35E-15 3486800 862.27 960.65 895.43 903.03 913.29 680.7 979.52 1153.7 901.02 1013.1 TRUE FALSE 788.9294085 898.1115104 834.6507064 972.5815271 876.9117254 719.2406458 914.178008 1143.613323 994.6842533 1138.610477 0.692887888 0.788778541 0.733043234 0.854182837 0.770159544 0.631682793 0.802889159 1.004393817 0.873594854 1 10.15305856 -7.633401257 5.18886559 0.952515174 0.750072738 0.685413268 0.064718344 0.124760639 5.170775546 0.031602471 0.017750295 2.33E-08 7.633401257 -0.202442436 TTPVDLCLLEESVGSLEGS(ph)R ddPTM_A459_MK2206_30min_R1 1 TTPVDLCLLEESVGSLEGSR 20 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 TTPVDLCLLEES(0.015)VGS(0.296)LEGS(0.689)R 58.864 0.034172 7077300 297.57 217.87 253.08 365.88 284.78 371.37 396.38 334.41 289.4 204.25 TRUE FALSE 272.2601089 203.6866234 235.9016347 394.060141 273.4366096 392.3966485 369.9382134 331.4862886 319.4841656 229.554032 1.186039324 0.88731451 1.027651889 1.716633498 1.191164482 1.709386871 1.6115518 1.444044723 1.391760201 1 7.842689962 -5.737108238 23.9237022 1.464573789 1.019032464 0.409348731 0.220610529 120.9110072 118884.5049 0.05648015 0.09774987 1.83E-06 5.737108238 -0.445541326 TTQPSINESES(ph)DPFEVVR ddPTM_A459_MK2206_30min_R2 1 TTQPSINESESDPFEVVR 18 0 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 1 TTQPSINES(0.008)ES(0.992)DPFEVVR 130.56 0.00077476 0 2698.3 3270.3 2950.2 2633.5 2908.6 3997.1 4423 2642 3171.4 3595.3 TRUE FALSE 2904.883923 3107.901657 3048.558196 2418.334626 2794.393749 4149.212441 3842.254787 2987.318471 3447.242639 3477.985655 0.835220214 0.893592431 0.876529836 0.695326222 0.803451775 1.192992971 1.104735662 0.858922022 0.991160683 1 11.76403627 -6.728893638 24.9994586 1.025443308 0.820989309 0.551350451 0.094111363 166.2295044 127685.9478 0.033824839 0.033822437 1.87E-07 6.728893638 -0.204453999 TTQSMQDFPVVDS(ph)EEEAEEEFQK ddPTM_A459_MK2206_30min_R1 3 TTQSMQDFPVVDSEEEAEEEFQK 23 0 Q9UBB9 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 TTQSMQDFPVVDS(1)EEEAEEEFQK;TTQSMQDFPVVDS(1)EEEAEEEFQK;TTQSMQDFPVVDS(1)EEEAEEEFQK 119.34 7.05E-06 6510000 2604.9 2554.11 2786.49 2119.38 2342.96 2542.78 2090.62 2118.01 2338.45 1989.93 TRUE FALSE 2383.339576 2387.836975 2597.350822 2282.615015 2249.634942 2686.750006 1951.158554 2099.492462 2581.540246 2236.457552 1.065676196 1.067687143 1.161368263 1.020638649 1.005892082 1.201341829 0.872432635 0.93875802 1.15429879 1 11.12699966 -7.263103677 24.99616437 0.986268871 1.082881753 0.227036171 0.086116214 239.0095347 3589663.161 0.034727968 0.024810428 5.46E-08 7.263103677 0.096612881 TTQSMQDFPVVDS(ph)EEEAEEEFQK ddPTM_A459_MK2206_30min_R2 1 TTQSMQDFPVVDSEEEAEEEFQK 23 0 Q9UBB9 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 TTQSMQDFPVVDS(1)EEEAEEEFQK 73.212 0.01199 0 9526.7 12270 11242 13295 9320.2 12198 11845 9847.4 9125.8 11918 TRUE FALSE 10256.07148 11660.68964 11616.80267 12208.75597 8954.242118 12662.20344 10289.73727 11134.48899 9919.545588 11529.11664 0.889579991 1.011412237 1.007605616 1.058949819 0.77666333 1.098280453 0.892500058 0.965771216 0.860390774 1 13.49299436 TTRT(ph)PDTSTYCYETAEK ddPTM_A459_MK2206_30min_R1 3 TTRTPDTSTYCYETAEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.034)T(0.005)RT(0.947)PDT(0.012)S(0.001)TYCYETAEK;TTRT(0.999)PDTSTYCYETAEK;T(0.284)T(0.284)RT(0.43)PDT(0.001)STYCYETAEK 228.32 2.94E-15 101044000 14996.9 15117 15476.8 15295 15767.9 12483 12478.6 14215 9414.54 5905.87 TRUE FALSE 13721.3349 14132.88055 14426.27794 16473.02355 15139.83115 13189.77667 11646.17536 14090.71975 10393.21512 6637.533763 2.067233915 2.12923671 2.173439481 2.481798834 2.280942244 1.987150219 1.754593766 2.122884833 1.565824822 1 12.69643158 -8.680895354 0.582154256 0.973654507 2.22161187 0.823348539 0.168501362 0.458055565 0.34453163 0.200724465 0.082562045 2.08E-09 8.680895354 1.247957363 TTRT(ph)PDTSTYCYETAEK ddPTM_A459_MK2206_30min_R2 1 TTRTPDTSTYCYETAEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.041)T(0.007)RT(0.808)PDT(0.116)S(0.022)T(0.004)YCY(0.002)ETAEK 150.68 0.0025569 11738000 16977 27454 22616 25977 28422 23368 31162 18393 20856 24947 TRUE FALSE 18276.77217 26090.67428 23370.00615 23854.596 27306.00947 24257.28561 27070.39197 20797.02825 22670.01718 24132.98143 0.757335857 1.081121052 0.968384541 0.988464524 1.13148098 1.005150801 1.121717681 0.86176788 0.93937905 1 14.55871854 -4.751675613 24.98639003 1.011542685 0.757335344 0.484314794 0.07846929 358.6136248 917661.7366 0.019977752 0.257824002 1.77E-05 4.751675613 -0.254207341 TTRT(ph)PEEGGYSYDISEK ddPTM_A459_MK2206_30min_R1 5 TTRTPEEGGYSYDISEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.053)T(0.01)RT(0.937)PEEGGYSYDISEK;T(0.014)T(0.003)RT(0.98)PEEGGYSYDIS(0.003)EK;T(0.008)T(0.002)RT(0.989)PEEGGYSYDISEK;T(0.007)T(0.001)RT(0.988)PEEGGYSYDIS(0.003)EK;T(0.006)T(0.001)RT(0.993)PEEGGYSYDISEK 201.9 4.16E-07 672167000 19787.2 18736.7 19741.3 17983.1 18833.5 15586.4 16163 16973.1 13309.9 10215.9 TRUE FALSE 18104.19473 17516.93742 18401.31556 19368.16148 18083.32181 16468.8885 15084.79576 16824.70598 14693.51173 11481.52282 1.576811284 1.525663251 1.602689456 1.686898313 1.574993326 1.434381899 1.31383232 1.465372342 1.279752866 1 13.48702638 -8.469243214 0.418979637 0.973948084 1.618243353 0.862560483 0.071041977 0.479186854 0.223520601 0.112099347 0.060412351 3.39E-09 8.469243214 0.64429527 TTRT(ph)PEEGGYSYDISEK ddPTM_A459_MK2206_30min_R2 3 TTRTPEEGGYSYDISEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.014)T(0.003)RT(0.983)PEEGGYSYDISEK;T(0.293)T(0.293)RT(0.414)PEEGGYSYDISEK;T(0.001)TRT(0.995)PEEGGYS(0.001)YDIS(0.002)EK 145.17 0.0050348 369648600 138966 182269 152401 201165 200188 158460 199353 144487 143887 183135 TRUE FALSE 149605.3438 173217.7865 157481.9733 184729.176 192327.6133 164490.3063 173177.7116 163371.947 156402.0312 177159.3199 0.844467815 0.977751476 0.888928527 1.042729087 1.085619505 0.928488021 0.977525268 0.922175289 0.882832646 1 17.43468784 -3.987678342 1.560895551 0.96994723 4.52E-12 0.253125032 0.06194657 17.70025793 6.263686585 0.018197967 47.65579892 0.000102878 3.987678342 -0.96994723 TTRT(ph)SDVGGYYYEK ddPTM_A459_MK2206_30min_R1 1 TTRTSDVGGYYYEK 14 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.001)TRT(0.499)S(0.499)DVGGYYYEK 140.49 0.005825 5112300 1970.9 1918.8 2175.6 2404.3 2347.2 1742.5 1764.6 2027.3 1076.5 837.76 TRUE FALSE 1803.264605 1793.885771 2027.926334 2589.479603 2253.706054 1841.158844 1646.886754 2009.57553 1188.406027 941.5480336 1.915212545 1.905251466 2.153821432 2.750236324 2.393617716 1.955459285 1.749126646 2.134331397 1.262183112 1 9.878890886 -8.330199851 0.999427048 0.972528364 2.188961613 0.663655176 0.279582674 0.340479603 0.723376545 0.289830631 0.09921514 4.68E-09 8.330199851 1.21643325 TTRTS(ph)DVGGYYYEK ddPTM_A459_MK2206_30min_R1 2 TTRTSDVGGYYYEK 14 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.001)TRT(0.188)S(0.706)DVGGY(0.08)Y(0.024)YEK;T(0.001)T(0.002)RT(0.201)S(0.795)DVGGYYYEK 128.9 0.0052081 23682200 8012.5 7873.7 8115.5 9440.7 9298.5 7585.4 7366.5 9152.1 4471.5 2964.49 TRUE FALSE 7330.9948 7361.120699 7564.642471 10167.82435 8928.121055 8014.878793 6875.094226 9072.084155 4936.328426 3331.753402 2.200341356 2.209383412 2.270468897 3.051793792 2.679706442 2.405603845 2.063506327 2.722915852 1.481600776 1 11.70206591 -8.431054096 3.822199179 1.010719345 2.447815232 0.750128945 0.284989579 0.10790238 2.779372172 0.292362907 0.077031249 3.71E-09 8.431054096 1.437095888 TTRTS(ph)DVGGYYYEK ddPTM_A459_MK2206_30min_R2 2 TTRTSDVGGYYYEK 14 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TTRT(0.01)S(0.99)DVGGYYYEK;TTRT(0.259)S(0.74)DVGGYYYEK 177.58 0.00033493 20308300 34902 93082 65305 80323 107395 80938 89580 52554 81529 57281 TRUE FALSE 37574.12396 88459.68323 67482.23611 73760.35396 103178.1327 84018.15231 77818.0384 59422.98824 88620.24505 55411.92566 0.678087316 1.596401536 1.217828749 1.331127787 1.86202034 1.516246752 1.404355425 1.072386269 1.59929914 1 15.75790888 -5.997874348 18.45391335 1.434047455 1.218522617 0.099464896 0.311795852 6.660749746 57743.75216 0.087198745 0.127355839 1.00E-06 5.997874348 -0.215524839 TTRTSDVGGY(ph)YYEK ddPTM_A459_MK2206_30min_R1 1 TTRTSDVGGYYYEK 14 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TTRTS(0.007)DVGGY(0.768)Y(0.224)YEK 119.03 0.012991 15848000 5079.8 5240.2 5782.7 5931.6 6623.8 5158.8 4773.8 5956.2 2820.7 1710.9 TRUE FALSE 4647.736335 4899.062028 5390.186436 6388.45286 6359.96002 5450.886798 4455.348512 5904.125571 3113.921859 1922.859209 2.417096537 2.547800695 2.803214303 3.322371618 3.307553663 2.834782065 2.317043542 3.070492912 1.619422704 1 10.90903742 -8.424522677 3.423970108 1.011624538 2.833222271 0.781419147 0.327942835 0.106586852 2.295805365 0.34353513 0.09125689 3.76E-09 8.424522677 1.821597733 TTS(ph)FAESCKPVQQPSAFGSMK ddPTM_A459_MK2206_30min_R1 2 TTSFAESCKPVQQPSAFGSMK 21 1 P49841;P49841-2;A0A3B3ITW1 P49841 GSK3B Glycogen synthase kinase-3 beta 1 T(0.218)T(0.05)S(0.706)FAES(0.026)CKPVQQPSAFGSMK;T(0.093)T(0.016)S(0.89)FAES(0.001)CKPVQQPSAFGSMK 148.29 1.39E-06 161192000 3777.9 3629.7 3351.3 3299 4834.9 5484.2 6419.8 8591.9 8003.5 7308.1 TRUE FALSE 3456.569766 3393.40587 3123.823093 3553.089552 4642.315695 5794.710665 5991.546856 8516.781924 8835.492466 8213.482601 0.420840943 0.413150674 0.380328692 0.432592327 0.565206736 0.705512016 0.729477025 1.036927006 1.075730344 1 13.00377835 -7.204855426 0.887612939 1.072810994 0.398346867 0.955917755 0.055227234 0.112357926 0.174717462 0.043069448 0.026313598 6.24E-08 7.204855426 -0.674464126 down TTS(ph)FAESCKPVQQPSAFGSMK ddPTM_A459_MK2206_30min_R2 2 TTSFAESCKPVQQPSAFGSMK 21 1 P49841;P49841-2;A0A3B3ITW1 P49841 GSK3B Glycogen synthase kinase-3 beta 1 T(0.416)T(0.083)S(0.499)FAES(0.001)CKPVQQPSAFGSMK;T(0.05)T(0.039)S(0.903)FAES(0.007)CKPVQQPSAFGSMK 101.41 0.00013388 96233000 81359 98812 99160 95970 109208 119791 164858 137538 140146 158755 TRUE FALSE 87587.90759 93905.13977 102465.9449 88128.94401 104919.9452 124349.7304 143211.9466 155514.6888 152335.6458 153574.8374 0.570327204 0.611461756 0.667205297 0.573850154 0.683184479 0.809701202 0.932522209 1.012631311 0.991931025 1 17.22858233 -7.003942959 1.379260729 1.005560877 0.606537523 0.974826013 0.027857007 0.060077497 0.232493791 0.014957263 0.010921954 9.91E-08 7.003942959 -0.399023354 TTS(ph)FFSR ddPTM_A459_MK2206_30min_R1 1 TTSFFSR 7 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 T(0.074)T(0.397)S(0.529)FFSR 95.358 0.023842 5735500 5769.7 6757.6 6190.6 5305.4 5862.2 5593.7 5605.4 5555.4 5080.4 5527.4 TRUE FALSE 5278.956717 6317.679012 5770.39932 5714.022827 5628.696161 5910.41046 5231.473994 5506.829724 5608.52576 6212.176042 0.849775776 1.016983255 0.928885351 0.91981019 0.906074799 0.95142353 0.842132283 0.886457448 0.902827886 1 12.600883 -5.837320639 2.944852915 0.907744874 0.940967472 0.00259658 0.054224016 0.775860756 13.58154667 0.015382154 0.025534742 1.45E-06 5.837320639 0.033222598 TTS(ph)FFSR ddPTM_A459_MK2206_30min_R2 4 TTSFFSR 7 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 T(0.004)T(0.012)S(0.984)FFSR;TT(0.012)S(0.988)FFSR;TT(0.012)S(0.987)FFSR;T(0.001)T(0.042)S(0.957)FFSR 114.89 0.013438 26062400 149888 196564 180704 203758 151212 156581 170010 129282 158262 157444 TRUE FALSE 161363.5405 186802.9176 186728.5812 187110.3196 145274.6571 162539.7997 147687.4828 146179.6013 172027.3427 152306.6152 1.059465082 1.226492476 1.226004405 1.228510787 0.953830252 1.06718805 0.969672149 0.959771847 1.12948044 1 17.21661908 -6.257451209 24.99876331 1.011823011 1.190993943 0.605289628 0.067890179 227.0504926 1423202.833 0.020003162 0.024899322 5.53E-07 6.257451209 0.179170932 TTS(ph)GDDACNLTSFR ddPTM_A459_MK2206_30min_R1 1 TTSGDDACNLTSFR 14 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0U1RQT6 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 T(0.049)T(0.067)S(0.884)GDDACNLTSFR 97.2 0.011262 4362700 1114.2 885.78 944.36 883.52 996.99 951.22 1177.1 1181.7 1352.5 1272.4 TRUE FALSE 1019.431439 828.115561 880.2594743 951.5688635 957.2777771 1005.077254 1098.577807 1171.368521 1493.097215 1430.034518 0.712871911 0.579087813 0.615551207 0.665416709 0.66940886 0.702834261 0.768217685 0.819119054 1.044098724 1 10.48183426 -7.857425594 1.077945595 1.032755555 0.643914809 0.908159598 0.044750847 0.135669224 0.285019377 0.03920644 0.014913581 1.39E-08 7.857425594 -0.388840746 TTS(ph)GDDACNLTSFR ddPTM_A459_MK2206_30min_R2 1 TTSGDDACNLTSFR 14 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0U1RQT6 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 T(0.006)T(0.006)S(0.988)GDDACNLTSFR 139.21 0.00057249 8641300 46349 29102 28240 36853 23701 27521 41905 29209 19454 33619 TRUE FALSE 49897.51508 27656.837 29181.50751 33841.99201 22770.37965 28568.33094 36402.82316 33026.71659 21146.07376 32522.01478 1.534268876 0.850403555 0.897284738 1.040587191 0.700152798 0.878430538 1.119328658 1.015518774 0.650207987 1 14.98912902 -4.758136955 24.99783155 0.909595145 1.534269742 0.644161115 0.140112169 59.76884808 452348.9749 0.03490767 0.244942852 1.75E-05 4.758136955 0.624674597 TTS(ph)PLEEEER ddPTM_A459_MK2206_30min_R1 2 TTSPLEEEER 10 0 S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 TT(0.066)S(0.934)PLEEEER;T(0.015)T(0.223)S(0.762)PLEEEER 186.74 5.67E-05 70026000 6270.4 6764.2 6625.5 6070 6018.7 5919.5 7376.8 5753.6 6384 7677.3 TRUE FALSE 5737.069553 6323.849351 6175.77952 6537.512452 5778.962434 6254.656974 6884.707132 5703.296882 7047.639645 8628.421885 0.66490369 0.73290915 0.715748442 0.757671859 0.66975891 0.724890027 0.797910351 0.660989571 0.816793585 1 13.074881 -8.584872883 4.362377294 0.999928318 0.71959722 0.818993878 0.040993742 0.116755568 6.442894881 0.037796203 0.009869359 2.60E-09 8.584872883 -0.280331098 TTS(ph)PPEVSGYSYEK ddPTM_A459_MK2206_30min_R1 6 TTSPPEVSGYSYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.131)T(0.021)S(0.848)PPEVSGYSYEK;T(0.001)T(0.007)S(0.992)PPEVSGYSYEK;T(0.043)T(0.006)S(0.95)PPEVSGYSYEK;T(0.002)T(0.01)S(0.989)PPEVSGYSYEK;T(0.367)T(0.074)S(0.559)PPEVSGYSYEK;T(0.008)T(0.044)S(0.948)PPEVSGYSYEK 206.66 6.18E-10 2291986000 24394.2 23632.5 23050.9 19183 21659.5 19461.7 20718.6 20374.2 18743.5 17234 TRUE FALSE 22319.34519 22094.01995 21486.26913 20660.47798 20796.75625 20563.60464 19336.5 20196.07052 20691.9539 19369.07803 1.15231841 1.140685164 1.109307789 1.06667328 1.073709147 1.061671836 0.998318039 1.042696533 1.06829834 1 14.24146766 -5.218361334 0.482274854 1.02531698 1.218903284 0.813926723 0.021211425 1.366255937 0.333336192 0.015579769 0.143602127 6.05E-06 5.218361334 0.193586305 TTS(ph)PPEVSGYSYEK ddPTM_A459_MK2206_30min_R2 2 TTSPPEVSGYSYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.005)T(0.001)S(0.994)PPEVSGYSYEK;T(0.037)T(0.205)S(0.758)PPEVSGYSYEK 157.33 0.00058291 1333980000 176340 192996 172882 200433 189999 161705 224277 160428 149308 198897 TRUE FALSE 189840.726 183412.0993 178645.7996 184056.9827 182538.6846 167858.7971 194829.1605 181396.4904 162294.54 192407.0072 0.986662226 0.953250622 0.928478657 0.956602285 0.94871121 0.872415197 1.012588696 0.942774866 0.843495995 1 17.55380182 -4.822484572 2.679768086 0.937431644 0.994008406 0.085043553 0.048200593 1.08742048 11.20953457 0.012134044 0.134025604 1.50E-05 4.822484572 0.056576762 TTS(ph)PPLSIPTTHLIHQPAGSR ddPTM_A459_MK2206_30min_R2 1 TTSPPLSIPTTHLIHQPAGSR 21 0 Q5T5U3;A0A087WW76;A0A452Q6Z5;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 T(0.196)T(0.196)S(0.605)PPLS(0.002)IPTTHLIHQPAGSR 88.244 0.00059325 30148000 22716 36783 26246 42083 32807 35405 35591 27016 29171 26926 TRUE FALSE 24455.15443 34956.40971 27121.02854 38644.68428 31518.83234 36752.36208 30917.85895 30547.08396 31708.24085 26047.40683 0.938870982 1.34203032 1.041217989 1.483628852 1.210056439 1.410979693 1.186984146 1.172749524 1.217328123 1 14.66885213 -9.112997015 0.96564448 0.999602412 1.23861427 0.156777002 0.153612997 4.070322555 5.129624609 0.147520288 0.045630216 7.71E-10 9.112997015 0.239011858 TTS(ph)PSSDTDLLDR ddPTM_A459_MK2206_30min_R1 1 TTSPSSDTDLLDR 13 0 Q96QT6;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-2;K7ERZ4;K7EJ43;K7ENU0 Q96QT6;K7ENU0 PHF12 PHD finger protein 12 1 TT(0.017)S(0.549)PS(0.332)S(0.098)DT(0.004)DLLDR 133.98 0.0012684 20556000 4094.7 4282.1 4121.6 3696.8 4324.3 3806.6 4035.6 4052.1 3679.8 2917.7 TRUE FALSE 3746.424263 4003.334512 3841.837275 3981.528177 4152.053974 4022.126402 3766.392487 4016.672917 4062.328378 3279.166704 1.142492774 1.220838973 1.171589499 1.214189011 1.266191795 1.226569664 1.148582194 1.224906594 1.238829479 1 11.67911353 -10.58035549 5.060684644 0.999998174 1.206924638 0.727720038 0.037802183 1.52E-06 2.83E-07 0.037136427 0.009006753 2.63E-11 10.58035549 0.206926463 TTS(ph)PSSDTDLLDR ddPTM_A459_MK2206_30min_R2 3 TTSPSSDTDLLDR 13 0 Q96QT6;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-2;K7ERZ4;K7EJ43;K7ENU0 Q96QT6;K7ENU0 PHF12 PHD finger protein 12 1 T(0.005)T(0.008)S(0.976)PS(0.009)S(0.002)DTDLLDR;T(0.041)T(0.006)S(0.952)PSSDTDLLDR;T(0.002)T(0.068)S(0.724)PS(0.102)S(0.102)DT(0.002)DLLDR 234.04 1.56E-13 44283700 89722 110298 101824 107932 110190 118586 108819 88864 101408 101769 TRUE FALSE 96591.1853 104820.7617 105218.7613 99113.61034 105863.3869 123098.8733 94530.93458 100478.8299 110228.2845 98448.28586 0.981136283 1.06472917 1.068771898 1.006758111 1.075319758 1.250391231 0.960209045 1.020625489 1.119656717 1 16.58707847 -4.76159608 20.8485367 1.065045675 0.981135408 0.093437381 0.07618867 1.128249381 154354.3991 0.019042952 0.105209708 1.73E-05 4.76159608 -0.083910267 TTSAT(ph)PLKDNTQQFR ddPTM_A459_MK2206_30min_R1 2 TTSATPLKDNTQQFR 15 1 Q14207 Q14207 NPAT Protein NPAT 1 TTS(0.002)AT(0.998)PLKDNTQQFR;TTS(0.001)AT(0.999)PLKDNTQQFR 138.81 0.0037852 4103200 1055.12 921.41 926.41 788.2 764.33 641.96 1036.24 4023.2 703.66 3618.3 TRUE FALSE 965.3765033 861.4260415 863.5278703 848.9073006 733.8851176 678.3072204 967.1143203 3988.025587 776.8079751 4066.562321 0.237393756 0.211831511 0.212348368 0.208753053 0.180468184 0.166801137 0.237821099 0.980687193 0.191023256 1 11.98959401 -8.471623344 0.519708703 0.990894571 0.171088421 0.527868938 0.21613984 0.738591628 0.491826737 0.236661249 0.11382749 3.38E-09 8.471623344 -0.81980615 TTSESS(ph)SSPSASLK ddPTM_A459_MK2206_30min_R2 1 TTSESSSSPSASLK 14 0 Q96CB8;A0A087WXN4 Q96CB8 INTS12 Integrator complex subunit 12 1 TTSES(0.084)S(0.49)S(0.212)S(0.212)PSASLK 85.536 0.024476 11023000 51844 46941 42543 48293 40090 37383 53543 37915 34993 50722 TRUE FALSE 55813.2165 44609.9782 43961.36239 44347.30742 38515.86516 38805.63626 46512.73978 42870.62068 38036.62789 49066.94529 1.13749116 0.909165589 0.895946591 0.903812274 0.784965621 0.790871248 0.947944477 0.873716927 0.775198612 1 15.58246384 TTSESSS(ph)SPSASLK ddPTM_A459_MK2206_30min_R2 1 TTSESSSSPSASLK 14 0 Q96CB8;A0A087WXN4 Q96CB8 INTS12 Integrator complex subunit 12 1 TTSES(0.001)S(0.127)S(0.436)S(0.436)PSASLK 182.72 7.63E-05 7001500 65779 55444 50695 54033 53399 42320 65051 48602 37374 58412 TRUE FALSE 70815.09082 52690.73158 52385.146 49618.33106 51302.28695 43930.51726 56509.72556 54954.44828 40624.72296 56506.02122 1.253230882 0.932479945 0.927071927 0.87810697 0.907908323 0.777448426 1.000065556 0.972541458 0.718945027 1 15.78611699 -4.743273666 3.520582112 0.897021262 1.313667387 0.601463071 0.086247697 0.232146236 4.438178924 0.021042331 0.272637383 1.81E-05 4.743273666 0.416646126 TTSFFLNS(ph)PEK ddPTM_A459_MK2206_30min_R2 2 TTSFFLNSPEK 11 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 TTSFFLNS(1)PEK;TTSFFLNS(1)PEK 95.428 0.021233 7783300 89044 67861 56266 59697 55401 48247 71547 60221 49644 70394 TRUE FALSE 95861.2771 64491.12142 58141.88036 54819.56414 53225.67837 50083.07339 62152.79296 68092.09147 53961.94538 68097.04954 1.407715573 0.947047219 0.853809097 0.805021135 0.781615044 0.735466129 0.912709044 0.999927191 0.792427069 1 16.05530467 -4.74178494 2.879391095 0.853646127 1.538524673 0.788019799 0.084694885 0.219022281 2.322452473 0.022583294 0.372005029 1.81E-05 4.74178494 0.684878546 TTSFFLNS(ph)PEKEHQEMDEGSQSLEK ddPTM_A459_MK2206_30min_R1 1 TTSFFLNSPEKEHQEMDEGSQSLEK 25 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 T(0.018)T(0.012)S(0.011)FFLNS(0.942)PEKEHQEMDEGS(0.013)QS(0.004)LEK 55.588 0.0054836 10655000 3061 3439.5 3484.2 2853.5 2381.1 2375 2352.1 2675.4 3149.2 2727.5 TRUE FALSE 2800.645876 3215.587925 3247.702212 3073.277064 2286.255745 2509.470448 2195.195701 2652.00926 3476.57061 3065.403292 0.913630478 1.048993434 1.0594698 1.002568593 0.745825436 0.818642837 0.716119705 0.865142041 1.134131558 1 11.58186118 -6.129091308 8.594044368 0.862125917 1.014637792 0.20160722 0.119644637 0.441417109 28.62827361 0.036443509 0.047137378 7.43E-07 6.129091308 0.152511875 TTSIS(ph)PALAR ddPTM_A459_MK2206_30min_R1 1 TTSISPALAR 10 0 Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3;Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5 Q9UKE5-8 TNIK TRAF2 and NCK-interacting protein kinase 1 T(0.047)T(0.004)S(0.217)IS(0.732)PALAR 105.36 0.012559 14494000 3331.4 3585 3568.9 3304.5 3726.6 2869.1 3413.2 3224.1 2879 2846.9 TRUE FALSE 3048.046936 3351.615848 3326.653012 3559.013163 3578.161631 3031.545963 3185.511656 3195.912034 3178.282353 3199.595465 0.952635097 1.047512376 1.039710503 1.112332231 1.118316884 0.947477891 0.995598253 0.998848782 0.99333881 1 11.6436738 -6.773040288 24.99971402 0.987514897 1.056170918 0.358524117 0.044797732 266.9433122 575253.5293 0.016739788 0.014885017 1.69E-07 6.773040288 0.068656021 TTSIS(ph)PALAR ddPTM_A459_MK2206_30min_R2 1 TTSISPALAR 10 0 Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3;Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5 Q9UKE5-8 TNIK TRAF2 and NCK-interacting protein kinase 1 T(0.041)T(0.139)S(0.003)IS(0.818)PALAR 169.21 0.00024231 20667000 56976 81336 60150 81269 74662 85147 78527 55460 71552 72866 TRUE FALSE 61338.12637 77296.97251 62155.37098 74629.06273 71730.39473 88387.32875 68216.31057 62708.81242 77775.46362 70488.38839 0.870187669 1.09659157 0.881781701 1.058742645 1.017620013 1.253927502 0.967766637 0.889633227 1.103379796 1 16.105098 -4.744891947 24.77691229 1.027431276 0.87018716 0.175763782 0.103654707 1690.908862 2531690.118 0.025975264 0.697706755 1.80E-05 4.744891947 -0.157244116 TTSQAHSLPLS(ph)PASTR ddPTM_A459_MK2206_30min_R1 1 TTSQAHSLPLSPASTR 16 0 P19838-3;P19838;P19838-2 P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit 1 TTSQAHS(0.007)LPLS(0.909)PAS(0.046)T(0.038)R 84.371 0.011341 29404000 3079.4 1633.4 2368.7 1811 4005.1 3475.8 3246 2958.7 2054.4 1753.6 TRUE FALSE 2817.480859 1527.065363 2207.919244 1950.483534 3845.568386 3672.596792 3029.465263 2932.832398 2267.962232 1970.849207 1.429577083 0.774826079 1.120288267 0.989666549 1.951224057 1.863459051 1.537137013 1.488105933 1.150753809 1 10.94460168 -6.231275953 24.94732867 1.543037134 1.059870512 0.301864092 0.307835487 763.626732 631574.3645 0.091439123 0.118033024 5.87E-07 6.231275953 -0.483166622 TTSQAHSLPLS(ph)PASTR ddPTM_A459_MK2206_30min_R2 3 TTSQAHSLPLSPASTR 16 0 P19838-3;P19838;P19838-2 P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit 1 TTSQAHSLPLS(0.431)PAS(0.138)T(0.431)R;TTSQAHS(0.051)LPLS(0.856)PAS(0.046)T(0.046)R;TTSQAHS(0.002)LPLS(0.979)PAS(0.009)T(0.009)R 97.08 0.0051693 57133000 54314 125988 96823 160305 162340 177492 157212 103804 136055 92005 TRUE FALSE 58472.3216 119731.6191 100051.0305 147207.5687 155965.7159 184246.5824 136569.8756 117371.5392 147888.818 89002.88438 0.656971086 1.345255493 1.12413245 1.653964023 1.752366982 2.070119229 1.534443254 1.318738601 1.661618261 1 16.44156447 -5.707113164 4.500408199 1.611404621 1.055821689 0.37821166 0.307493602 0.215129219 8.940348171 0.085607321 0.149059618 1.96E-06 5.707113164 -0.555582932 TTSRSPVLS(ph)R ddPTM_A459_MK2206_30min_R1 2 TTSRSPVLSR 10 1 G5E948;A0A0D9SEY1;O95819-3;C9J840;A0A0D9SG62;H7C0P6;O95819-2;O95819-5;E7EX83;E7ENQ1;G3XAA2;H7C360;O95819-4;O95819;H7C3Z6;O95819-6;E7EN19 G5E948;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 T(0.03)T(0.019)S(0.019)RS(0.042)PVLS(0.889)R;TTSRSPVLS(1)R 128.88 0.014444 138232000 9959.6 10434.8 10328.8 9347.9 11366.2 10486.4 10467.5 10720 8678 7043.8 TRUE FALSE 9112.48372 9755.492623 9627.709834 10067.87688 10913.46019 11080.13091 9769.232174 10626.27617 9580.109155 7916.439122 1.15108366 1.232308172 1.216166724 1.27176837 1.378581963 1.399635712 1.234043744 1.342305045 1.210153834 1 12.95063593 -8.594402934 6.667676681 1.000002192 1.280191572 0.568857984 0.072849756 0.841998588 78.1083365 0.075896514 0.019645469 2.54E-09 8.594402934 0.28018938 TTSSANNPNLMYQDECDRR ddPTM_A459_MK2206_30min_R1 2 TTSSANNPNLMYQDECDRR 19 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 ; 139.88 0.00062688 53089000 2412.43 2756.96 2956.2 2305.06 2841.3 2586 2497.1 2445.26 2325.46 2053.02 FALSE TRUE 2207.24016 2577.481403 2755.54138 2482.596121 2728.125004 2732.417085 2330.523015 2423.88135 2567.199889 2307.363617 0.956606988 1.117067715 1.19423803 1.075944902 1.182355908 1.184216075 1.010037169 1.05049821 1.112611757 1 11.17202966 -10.67106514 5.486775557 0.99999784 1.101914361 0.134552053 0.074152422 2.01E-06 3.12E-07 0.073749782 0.017886571 2.13E-11 10.67106514 0.101916521 TTSSANNPNLMYQDECDRR ddPTM_A459_MK2206_30min_R2 1 TTSSANNPNLMYQDECDRR 19 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 79.332 0.0094418 4370900 7735 10982 8202.5 8810.6 7849.1 7124.9 16136 17087 5756.3 7102 FALSE TRUE 8327.197547 10436.64985 8475.967256 8090.745796 7540.904895 7396.043062 14017.32382 19320.32957 6256.972569 6870.262322 1.212063988 1.519105001 1.23371814 1.177647289 1.097615279 1.076529937 2.040289462 2.812167668 0.910732702 1 12.74614947 -7.258674492 24.91859692 1.841811435 1.226278384 0.141320409 0.518062504 338.698742 3052547.997 0.198061595 0.146497766 5.51E-08 7.258674492 -0.615533052 TTSSSGVS(ph)PR ddPTM_A459_MK2206_30min_R2 1 TTSSSGVSPR 10 0 Q5QP82-2 Q5QP82-2 DCAF10 DDB1- and CUL4-associated factor 10 1 TTSSSGVS(1)PR 82.494 0.042483 4706200 22970 32694 32492 37911 35491 31310 35286 25374 26930 31165 TRUE FALSE 24728.60086 31070.4635 33575.26706 34813.55003 34097.44501 32501.52399 30652.90581 28690.46892 29272.32272 30148.0886 0.820237767 1.030594805 1.113678134 1.154751483 1.130998567 1.078062507 1.016744584 0.95165134 0.970951197 1 14.87977892 -7.510494383 3.9205756 0.971684978 1.063840395 0.139222672 0.087856824 0.421806982 14.6238843 0.045180017 0.02689808 3.09E-08 7.510494383 0.092155417 TTSVSLTIGSSS(ph)PK ddPTM_A459_MK2206_30min_R1 2 TTSVSLTIGSSSPK 14 0 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;D6RBB1;H0Y952;Q8WX93-6;D6RBH5;D6R9Z5 Q8WX93 PALLD Palladin 1 TTSVSLTIGS(0.002)S(0.069)S(0.929)PK;TTSVSLTIGSS(0.069)S(0.931)PK 242.4 9.55E-40 9076500 7250.9 9019.7 8182.9 7104.3 5061.3 4298.8 5358.7 6246.4 7569.5 6576.9 TRUE FALSE 6634.172879 8432.515891 7627.467547 7651.474417 4859.697704 4542.194341 5001.230901 6191.788383 8356.376613 7391.696025 0.897517005 1.140809344 1.03189681 1.035144626 0.657453673 0.614499612 0.676601268 0.837668157 1.130508693 1 12.85168971 -6.237819677 23.5673001 0.793948173 1.034915051 0.280806444 0.158853897 466.8551743 465818.3297 0.049277826 0.063567009 5.78E-07 6.237819677 0.240966879 TTSVSLTIGSSS(ph)PK ddPTM_A459_MK2206_30min_R2 2 TTSVSLTIGSSSPK 14 0 Q8WX93;Q8WX93-3;Q8WX93-5;Q8WX93-9;Q8WX93-2;Q8WX93-8;D6RBB1;H0Y952;Q8WX93-6;D6RBH5;D6R9Z5 Q8WX93 PALLD Palladin 1 TTSVSLTIGS(0.001)S(0.232)S(0.768)PK;TTSVSLTIGSS(0.022)S(0.977)PK 241.76 1.16E-19 7915700 71058 67435 66867 55658 63754 45150 81078 63870 50975 84165 TRUE FALSE 76498.25511 64086.27596 69096.31241 51110.56336 61250.69762 46868.21489 70432.36121 72218.0283 55408.71336 81418.70294 0.939566124 0.787119834 0.848654055 0.627749663 0.752292722 0.575644332 0.865063661 0.886995564 0.680540359 1 16.31307262 -9.674204293 18.58631555 1 0.771599964 0.270421188 0.111444415 0 0 0.109476892 0.026552046 2.12E-10 9.674204293 -0.228400036 TTT(ph)PPDSGVLFEGLGISTRPR ddPTM_A459_MK2206_30min_R1 1 TTTPPDSGVLFEGLGISTRPR 21 1 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 T(0.19)T(0.256)T(0.547)PPDS(0.007)GVLFEGLGISTRPR 132.5 6.40E-05 16593000 1854.9 2175.6 1967.2 1868.2 1650.6 1515 1852.2 1849.6 1650.5 1737.1 TRUE FALSE 1697.131015 2033.968045 1833.671945 2012.089088 1584.853107 1600.777991 1728.643118 1833.429142 1822.075381 1952.305062 0.869296017 1.041829007 0.939234334 1.030622276 0.811785585 0.81994255 0.88543699 0.939109967 0.9332944 1 10.93096279 TTTAAAVAST(ph)GPSSRSPSTLLPK ddPTM_A459_MK2206_30min_R1 1 TTTAAAVASTGPSSRSPSTLLPK 23 1 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TTTAAAVAS(0.11)T(0.593)GPS(0.11)S(0.025)RS(0.161)PSTLLPK 109.19 2.37E-05 78874000 4158.8 3441.5 4043.1 4320 4652.6 3399.5 2614.3 3859.7 1936.7 859.98 TRUE FALSE 3805.072221 3217.457724 3768.665637 4652.727149 4467.27709 3591.976752 2439.904817 3825.95505 2138.026896 966.5208149 3.936875608 3.328906812 3.899207941 4.813892341 4.622018503 3.716398754 2.524420353 3.958481794 2.212085723 1 9.916656992 -8.51606271 0.708409304 0.978095279 4.055460333 0.71787625 0.591102049 0.441452437 0.505524017 0.626756375 0.246885709 3.05E-09 8.51606271 3.077365054 TTTAAAVASTGPS(ph)SR ddPTM_A459_MK2206_30min_R2 1 TTTAAAVASTGPSSR 15 0 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TTTAAAVAST(0.004)GPS(0.498)S(0.498)R 98.507 0.0088364 3055100 12152 11337 8254.8 12334 10675 11426 12000 11032 8966.6 12141 TRUE FALSE 13082.36646 10774.02107 8530.010912 11326.27275 10255.84586 11860.82444 10424.38559 12473.92028 9746.49866 11744.84016 1.113882035 0.917340799 0.726277309 0.964361591 0.873221408 1.009875339 0.887571516 1.062076631 0.829853665 1 13.51973946 -6.749825766 24.94484627 0.957361234 0.910734964 0.028656305 0.107837833 854.7068785 1835818.667 0.035524768 0.035234365 1.78E-07 6.749825766 -0.04662627 TTTAAAVASTGPSS(ph)RSPSTLLPK ddPTM_A459_MK2206_30min_R1 1 TTTAAAVASTGPSSRSPSTLLPK 23 1 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TTTAAAVAS(0.001)T(0.003)GPS(0.047)S(0.799)RS(0.029)PS(0.048)T(0.073)LLPK 106.36 1.12E-05 76599000 3806.1 3371.8 3674.1 3881 4104.4 3226.8 2971.8 4030.9 2052.5 857.65 TRUE FALSE 3482.371208 3152.295207 3424.712329 4179.915292 3940.913057 3409.498627 2773.556644 3995.658266 2265.86472 963.9021569 3.612784953 3.270347705 3.552966765 4.336451851 4.088499054 3.537183316 2.877425498 4.145294455 2.350720666 1 9.9127429 -8.522017052 3.559472346 1.004518256 3.659540548 0.810331757 0.413021044 0.08646031 2.951326424 0.419792439 0.110704554 3.01E-09 8.522017052 2.655022292 TTTAAAVASTGPSSRS(ph)PSTLLPK ddPTM_A459_MK2206_30min_R2 2 TTTAAAVASTGPSSRSPSTLLPK 23 1 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TTTAAAVAST(0.001)GPS(0.004)S(0.004)RS(0.926)PS(0.028)T(0.037)LLPK;TTTAAAVAS(0.02)T(0.02)GPS(0.093)S(0.093)RS(0.766)PS(0.004)T(0.004)LLPK 91.64 7.86E-05 74134000 35652 110737 71397 90727 141125 119020 107232 71482 113674 61518 TRUE FALSE 38381.54453 105237.9616 73777.34035 83314.31388 135583.7234 123549.3895 93152.30959 80824.94283 123561.159 59510.6727 0.644952288 1.768388036 1.239732925 1.399989449 2.278309373 2.076087933 1.565304262 1.358158783 2.076285705 1 15.86086081 -6.020064421 23.94478386 1.760922219 1.280610695 0.215414121 0.434697568 690.1717912 823648.7205 0.125365956 0.164257277 9.55E-07 6.020064421 -0.480311524 TTTLS(ph)GTAPAAGVVPSR ddPTM_A459_MK2206_30min_R1 2 TTTLSGTAPAAGVVPSR 17 0 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 T(0.023)T(0.018)T(0.222)LS(0.71)GT(0.027)APAAGVVPSR;T(0.003)T(0.013)T(0.061)LS(0.892)GT(0.031)APAAGVVPSR 106.19 0.0025756 9272500 2320.4 2122.9 2006.27 1582.33 3034.3 1956.55 2648 2208.17 1541.51 1699.24 TRUE FALSE 2123.037795 1984.698824 1870.089982 1704.201331 2913.437406 2067.32817 2471.356752 2188.864202 1701.755481 1909.75468 1.111680897 1.039242812 0.979230475 0.892366621 1.525555841 1.082509807 1.294070269 1.146149412 0.891085907 1 10.89917161 -4.425276669 12.16663891 1.106515012 1.190226519 0 0.183646648 19472964.35 59058320.8 0.046478784 41839063.33 3.76E-05 4.425276669 0.083711506 TTTLSGT(ph)APAAGVVPSR ddPTM_A459_MK2206_30min_R2 1 TTTLSGTAPAAGVVPSR 17 0 E7EVA0;P27816-4;H0Y2V1;H7C4C5;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TTT(0.008)LS(0.4)GT(0.591)APAAGVVPSR 140.68 0.001177 5077900 12040 14750 12381 14008 15887 14260 14157 11900 12090 10802 TRUE FALSE 12961.79166 14017.53645 12793.77636 12863.50159 15263.19655 14802.67429 12298.16889 13455.37086 13141.56635 10449.53162 1.240418434 1.341451172 1.224339695 1.231012265 1.460658439 1.416587348 1.176911017 1.287653011 1.257622525 1 13.35115066 -9.281056912 0.799599518 0.995494705 1.306065254 0.533754593 0.083363786 2.612966469 2.101046912 0.116995611 0.030054138 5.24E-10 9.281056912 0.310570549 TTTPGPSLS(ph)QGVSVDEK ddPTM_A459_MK2206_30min_R2 2 TTTPGPSLSQGVSVDEK 17 0 O60934;A0A0C4DG07 O60934 NBN Nibrin 1 TTTPGPS(0.158)LS(0.842)QGVSVDEK;TTTPGPS(0.045)LS(0.587)QGVS(0.368)VDEK 157.88 3.89E-05 8819800 39205 42062 37299 41831 40253 36966 40526 37106 35583 38367 TRUE FALSE 42206.56494 39973.26224 38542.53004 38413.27349 38672.46496 38372.76703 35204.88752 41955.8816 38677.94502 37115.08793 1.137180788 1.077008421 1.038459888 1.0349773 1.041960753 1.033885925 0.948533049 1.130426572 1.042108403 1 15.17971817 -4.793299962 1.697002244 1.035063103 1.172191086 0.366892168 0.042339972 1.056951699 3.088104029 0.01177982 0.237670191 1.61E-05 4.793299962 0.137127982 TTTPPPSQIPDPPFS(ph)SPITPHR ddPTM_A459_MK2206_30min_R1 1 TTTPPPSQIPDPPFSSPITPHR 22 0 Q6ZS30-1;Q6ZS30 Q6ZS30-1 NBEAL1 Neurobeachin-like protein 1 1 TTTPPPS(0.001)QIPDPPFS(0.458)S(0.458)PIT(0.084)PHR 52.853 0.02355 7102000 1350.5 1283.4 1375.6 1115.9 1268.6 1698.8 1771.7 1685.2 1376.2 1415.5 TRUE FALSE 1235.632883 1199.850427 1282.228105 1201.846811 1218.068976 1794.984588 1653.513126 1670.466474 1519.260915 1590.862826 0.776706114 0.75421363 0.80599539 0.755468537 0.765665622 1.128308838 1.039381333 1.050038034 0.954991775 1 10.63559373 -6.750043984 24.99970825 1.037973703 0.771656907 0.903551589 0.042945145 60.6579377 133073.7606 0.01413447 0.014015566 1.78E-07 6.750043984 -0.266316796 TTWGDGGENS(ph)PCNVVSK ddPTM_A459_MK2206_30min_R1 3 TTWGDGGENSPCNVVSK 17 0 H3BM38;H3BV99;H3BP15;H3BQY9;O00161 H3BM38 SNAP23 Synaptosomal-associated protein;Synaptosomal-associated protein 23 1 TTWGDGGENS(1)PCNVVSK;TTWGDGGENS(1)PCNVVSK;TTWGDGGENS(1)PCNVVSK 251.56 1.22E-30 17589400 6025.54 6126.23 4907.4 4842.14 5826.6 5679.25 6738.96 6395.44 7528.2 6731.75 TRUE FALSE 5513.036182 5727.411314 4574.299361 5215.082462 5594.514184 6000.804227 6289.416274 6339.525342 8310.78333 7565.730012 0.728685292 0.757020315 0.604607798 0.689303273 0.739454643 0.79315601 0.831303293 0.837926457 1.098477386 1 12.88526358 -7.75244365 0.953636321 1.043734967 0.70030911 0.814685236 0.059640888 0.231657798 0.383188067 0.053357179 0.022211497 1.77E-08 7.75244365 -0.343425857 TTWGDGGENS(ph)PCNVVSK ddPTM_A459_MK2206_30min_R2 2 TTWGDGGENSPCNVVSK 17 0 H3BM38;H3BV99;H3BP15;H3BQY9;O00161 H3BM38 SNAP23 Synaptosomal-associated protein;Synaptosomal-associated protein 23 1 TTWGDGGENS(1)PCNVVSK;TTWGDGGENS(0.998)PCNVVS(0.002)K 247.28 2.29E-30 25747000 104189 61934 72152 69709 67124 73772 118786 71764 110997 90587 TRUE FALSE 112165.7899 58858.44762 74557.51167 64013.55171 64488.37449 76579.44515 103189.2555 81143.8012 120651.3184 87631.15361 1.279976188 0.671661221 0.850810569 0.73048852 0.735906944 0.873883796 1.177540763 0.925969793 1.376808514 1 16.41915623 -7.18661304 5.46885895 1.113500431 0.834541297 0.307624986 0.191835057 0.261554549 14.08492128 0.071538635 0.054788663 6.51E-08 7.18661304 -0.278959134 TTWGDGGENSPCNVVS(ph)K ddPTM_A459_MK2206_30min_R1 1 TTWGDGGENSPCNVVSK 17 0 H3BM38;H3BV99;H3BP15;H3BQY9;O00161 H3BM38 SNAP23 Synaptosomal-associated protein;Synaptosomal-associated protein 23 1 TTWGDGGENS(0.492)PCNVVS(0.508)K 189.04 7.01E-08 4721600 1462.8 1487.5 1197.4 1037.6 1564.5 1352.9 1641.5 1587.2 1981.8 1781.3 TRUE FALSE 1338.381179 1390.66348 1116.123824 1117.516132 1502.182652 1429.500029 1531.99853 1573.323278 2187.815202 2001.980892 0.668528448 0.694643733 0.557509729 0.558205194 0.750348147 0.714042794 0.765241335 0.785883264 1.092825217 1 10.96721249 -7.890950092 1.050282457 1.049300772 0.643026944 0.805586284 0.071861217 0.223555518 0.447900414 0.066703839 0.025211533 1.29E-08 7.890950092 -0.406273828 TTYDS(ph)AEEENKENLYAGK ddPTM_A459_MK2206_30min_R2 2 TTYDSAEEENKENLYAGK 18 1 E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4 E7ESG2 CLSPN Claspin 1 T(0.01)T(0.004)Y(0.021)DS(0.965)AEEENKENLYAGK;T(0.012)T(0.003)Y(0.008)DS(0.977)AEEENKENLYAGK 65.943 0.017814 62108000 67327 55203 72816 61520 61920 38270.2 77882 56216 48301 83494 TRUE FALSE 72481.60689 52461.69929 75243.6491 56493.61921 59488.70968 39726.59928 67655.99985 63563.62422 52502.13367 80769.59762 0.897387247 0.649522851 0.931583805 0.699441632 0.736523536 0.4918509 0.837641908 0.78697463 0.650023465 1 16.30152473 -10.70332765 4.214291855 1.000090448 0.740482035 0.281138264 0.123577703 86201851.61 13.26419395 76347.63851 0.029106731 1.98E-11 10.70332765 -0.259608413 TTYLVLDEADR ddPTM_A459_MK2206_30min_R2 2 TTYLVLDEADR 11 0 P17844-2;P17844;J3KTA4;J3QSF1;J3KRZ1 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ; 187.97 5.41E-12 3617800 35261 31698 35491 26542 35869 31244 34913 29244 27737 29738 FALSE TRUE 37960.60927 30123.92341 36674.25223 24373.4337 34460.60283 32433.01231 30328.88116 33066.29121 30149.51412 28767.6515 1.319558855 1.04714573 1.274843455 0.847251424 1.197894199 1.127412584 1.05427032 1.149426161 1.048035295 1 14.81215983 -2.886095641 1.766740083 1.087790635 180.4176463 0.275836655 0.111795137 1474.084746 7.661013575 0.028614323 1068998.127 0.001299883 2.886095641 179.3298556 TVAISDAAQLPHDY(ph)CTTPGGTLFSTTPGGTR ddPTM_A459_MK2206_30min_R2 1 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR 31 0 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 1 TVAISDAAQLPHDY(0.326)CT(0.284)T(0.284)PGGT(0.093)LFS(0.005)T(0.005)T(0.002)PGGT(0.002)R 53.995 0.026427 4242800 5570 7089.3 5954 7818.4 6716.8 5804.1 5001 4502.9 5437.3 4195.1 TRUE FALSE 5996.443483 6737.255671 6152.503388 7179.61171 6453.064683 6024.979093 4344.362693 5091.444491 5910.226526 4058.214231 1.47760644 1.660152788 1.516061755 1.769155422 1.590124206 1.484638008 1.070510931 1.254602197 1.456361392 1 11.98662931 -7.065242446 4.313140847 1.21802207 1.605968724 0.668161697 0.135322849 0.140450199 5.123736186 0.052068954 0.040769979 8.61E-08 7.065242446 0.387946654 TVAISDAAQLPHDYCT(ph)T(ph)PGGTLFSTTPGGTR ddPTM_A459_MK2206_30min_R1 1 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR 31 0 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 2 TVAISDAAQLPHDY(0.262)CT(0.716)T(0.797)PGGT(0.068)LFS(0.026)T(0.026)T(0.081)PGGT(0.023)R 62.364 0.0042159 0 309.4 399.69 399.47 444.93 403.4 476.75 542.77 243.14 238.09 498.77 TRUE FALSE 283.0839053 373.6701084 372.3550894 479.1985857 387.3317238 503.743173 506.5628036 241.0142526 262.8403075 560.5613931 0.505000717 0.666599793 0.664253896 0.854854779 0.690971102 0.898640504 0.903670516 0.429951573 0.468887638 1 9.130728577 -4.671524005 1.55047318 0.733796384 0.374738629 0.142061368 0.176005083 3.256832388 6.081443413 0.052160666 1.937802309 2.13E-05 4.671524005 -0.359057755 TVAISDAAQLPHDYCTTPGGT(ph)LFSTTPGGTR ddPTM_A459_MK2206_30min_R2 2 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR 31 0 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 1 TVAISDAAQLPHDY(0.001)CT(0.001)T(0.017)PGGT(0.316)LFS(0.217)T(0.217)T(0.217)PGGT(0.013)R;TVAISDAAQLPHDYCT(0.003)T(0.008)PGGT(0.243)LFS(0.243)T(0.243)T(0.243)PGGT(0.018)R 98.225 5.14E-08 47778000 52790 72983 80172 91606 99153 114982 98611 78032 79845 72126 TRUE FALSE 56831.64299 69358.77035 82844.89447 84121.49677 95259.75502 119357.7206 85663.25725 88231.05032 86789.77377 69772.53453 0.814527427 0.994069813 1.187356816 1.205653447 1.365290163 1.710669125 1.227750401 1.264552749 1.243895959 1 16.09037162 -5.141574984 1.261254536 1.322819364 0.74981946 0.460356397 0.168501177 0.712638085 1.508306987 0.054045796 0.44940745 7.22E-06 5.141574984 -0.572999904 TVAISDAAQLPHDYCTTPGGTLFSTT(ph)PGGTR ddPTM_A459_MK2206_30min_R1 2 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR 31 0 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 1 TVAISDAAQLPHDYCTTPGGT(0.006)LFS(0.196)T(0.196)T(0.58)PGGT(0.022)R;TVAISDAAQLPHDYCT(0.006)T(0.006)PGGT(0.013)LFS(0.198)T(0.198)T(0.531)PGGT(0.048)R 150.08 7.34E-20 73029000 5607.1 5777.8 6666.8 5970.2 8048.9 6809.5 7208.9 7007 5384.2 4689 TRUE FALSE 5130.186701 5401.66417 6214.276191 6430.025838 7728.295269 7195.048005 6728.007434 6945.738538 5943.906858 5269.90872 0.973486824 1.025001467 1.179199967 1.220139889 1.466495091 1.3653079 1.276683865 1.317999781 1.1278956 1 12.36356226 -5.376842833 1.866731631 1.282002695 0.974204552 0.396864834 0.121781076 0.346192088 2.226528006 0.035005018 0.119754038 4.20E-06 5.376842833 -0.307798142 TVAISDAAQLPHDYCTTPGGTLFSTT(ph)PGGTR ddPTM_A459_MK2206_30min_R2 2 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR 31 0 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 1 TVAISDAAQLPHDYCTT(0.001)PGGT(0.059)LFS(0.212)T(0.145)T(0.522)PGGT(0.059)R;TVAISDAAQLPHDYCTTPGGT(0.092)LFS(0.247)T(0.172)T(0.465)PGGT(0.024)R 146.92 1.19E-19 48329000 58784 92988 82368 110942 97907 125862 110407 81522 108868 74860 TRUE FALSE 63284.54824 88370.35114 85114.10801 101877.6837 94062.67924 130651.7666 95910.42828 92177.20531 118337.1419 72417.32433 0.873886861 1.220292961 1.175327987 1.406813696 1.298897468 1.804150703 1.324412758 1.272861241 1.634099892 1 16.14404725 -4.391347395 0.826487764 1.415849074 0.237924719 0.346480536 0.209561214 4.551151981 1.539150587 0.073466695 5.697995652 4.06E-05 4.391347395 -1.177924355 TVALWDLR ddPTM_A459_MK2206_30min_R2 1 TVALWDLR 8 0 E9PC52;Q16576;Q16576-2;Q5JP02;Q09028-3;Q09028;Q09028-4;Q09028-2;H0YEU5;H0YCT5;H0YF10;H0YDK2 E9PC52;Q09028-3 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 0 132.08 0.047149 5004400 38530 50686 40786 51215 54297 45715 51540 38555 43587 44723 FALSE TRUE 41479.88642 48169.00694 42145.78488 47030.57067 52165.02696 47454.71636 44772.73609 43594.27088 47378.11847 43263.69217 0.958768989 1.113381788 0.974160613 1.087067892 1.205746073 1.096871626 1.034880146 1.007641019 1.095101137 1 15.40086917 -4.747244683 24.8924355 1.070341193 0.95876869 0.207254822 0.064164683 1226.641587 2150962.305 0.016702685 0.348993003 1.79E-05 4.747244683 -0.111572502 TVANLLSGKS(ph)PR ddPTM_A459_MK2206_30min_R1 2 TVANLLSGKSPR 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 TVANLLS(0.343)GKS(0.657)PR;TVANLLSGKS(1)PR 135.86 0.001586 823850000 12923.5 13627.7 13253.8 12535.5 13208.8 11983.8 12108.1 12411.6 9640.5 7983.3 TRUE FALSE 11824.28846 12740.53425 12354.16898 13500.98638 12682.66553 12662.3124 11300.39074 12303.08669 10642.66447 8972.331475 1.317861304 1.419980335 1.376918476 1.504735577 1.413530648 1.411262216 1.259470938 1.371225163 1.186164879 1 13.13126721 -8.566765619 0.77338073 0.997334536 1.410083024 0.816876279 0.059089941 0.298555237 0.398092278 0.057435911 0.021364105 2.71E-09 8.566765619 0.412748487 TVANLLSGKS(ph)PR ddPTM_A459_MK2206_30min_R2 1 TVANLLSGKSPR 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 TVANLLS(0.117)GKS(0.883)PR 99.238 0.0080016 508320000 233600 359310 308370 325070 427530 254700 370520 278890 296140 304990 TRUE FALSE 251484.5956 341467.1879 318650.9019 298510.7412 410743.024 264392.787 321870.2789 315341.8806 321897.7219 295038.2013 0.852379775 1.157366017 1.080032689 1.011769797 1.392168954 0.89613069 1.090944418 1.06881712 1.091037433 1 18.17054224 -4.751336247 24.67256233 1.090770781 0.852379196 0.251080968 0.121753207 496.0091802 1211191.414 0.028944663 0.383039393 1.77E-05 4.751336247 -0.238391585 TVAS(ph)DLQK ddPTM_A459_MK2206_30min_R2 1 TVASDLQK 8 0 Q7L8J4;Q7L8J4-2 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 T(0.403)VAS(0.597)DLQK 109.16 0.01257 39643000 95948 113050 94201 106120 96559 91247 124080 84105 74399 102990 TRUE FALSE 103293.8527 107436.1014 97341.61432 97449.65654 92767.60849 94719.46852 107788.147 95097.81228 80870.09054 99629.44473 1.036780371 1.078356922 0.977036604 0.978121044 0.931126423 0.950717619 1.081890472 0.954515129 0.811708735 1 16.60428456 -5.36257001 4.421782909 0.961251459 1.057272301 0.27151078 0.063819689 0.299520792 9.747275894 0.017491484 0.038772204 4.34E-06 5.36257001 0.096020842 TVAT(ph)PLNQVANPNSAIFGGAR ddPTM_A459_MK2206_30min_R1 1 TVATPLNQVANPNSAIFGGAR 21 0 Q15056-2;Q15056 Q15056-2 EIF4H Eukaryotic translation initiation factor 4H 1 TVAT(1)PLNQVANPNSAIFGGAR 124.82 0.00016568 8035400 2475.4 2231.5 2434.3 1528 2124.4 2069.2 2499.5 2061.4 2232.9 2223.4 TRUE FALSE 2264.854231 2086.228944 2269.066498 1645.686825 2039.78065 2186.356316 2332.762916 2043.377397 2465.017946 2498.851578 0.906358045 0.834875093 0.908043726 0.65857726 0.816287237 0.874944449 0.933534003 0.817726597 0.986460327 1 11.2870495 -6.969224613 3.462354969 0.918631906 0.821222006 0.288062476 0.079470147 0.361348422 9.111931973 0.031016167 0.025888744 1.07E-07 6.969224613 -0.0974099 TVAT(ph)PLNQVANPNSAIFGGAR ddPTM_A459_MK2206_30min_R2 1 TVATPLNQVANPNSAIFGGAR 21 0 Q15056-2;Q15056 Q15056-2 EIF4H Eukaryotic translation initiation factor 4H 1 T(0.015)VAT(0.968)PLNQVANPNS(0.018)AIFGGAR 64.374 0.025509 7103900 25338 20699 20325 25691 19458 24082 27337 21132 16485 23186 TRUE FALSE 27277.89676 19671.11776 21002.62536 23591.96312 18693.98115 24998.45739 23747.61906 23894.02496 17918.8355 22429.44272 1.216164713 0.877022136 0.93638641 1.051830106 0.833457228 1.114537606 1.058769911 1.065297308 0.798897936 1 14.45310616 -4.745915279 24.97655288 0.977152334 1.216165373 0.34222491 0.101742477 1051.645901 1691887.476 0.024994463 0.60483546 1.80E-05 4.745915279 0.239013039 TVCGSPLAAQPSPSAELPQAAPPPPGS(ph)PSLPGR ddPTM_A459_MK2206_30min_R2 1 TVCGSPLAAQPSPSAELPQAAPPPPGSPSLPGR 33 0 W0Z7M9;A0A499FIJ6;B0QY83;Q969V6;A0A087WU73 W0Z7M9 mkl1;MKL1 MKL/myocardin-like protein 1 1 TVCGSPLAAQPSPSAELPQAAPPPPGS(0.728)PS(0.272)LPGR 64.296 0.00013988 5593300 8830.8 11254 12254 12717 10890 10918 13583 8774.2 10584 13363 TRUE FALSE 9506.892838 10695.14272 12662.54224 11677.98042 10462.40388 11333.49214 11799.53578 9921.018066 11504.57719 12926.9664 0.735431078 0.827351321 0.979544763 0.903381355 0.809347186 0.876732544 0.912784594 0.767466841 0.889967285 1 13.65809613 -12.37647759 1.398359266 3.2132356 0.858311622 0.281026621 0.069098193 793114.6348 21648.80477 5557825.861 0.019861479 4.20E-13 12.37647759 -2.354923977 TVCSTY(ph)LQSR ddPTM_A459_MK2206_30min_R1 1 TVCSTYLQSR 10 0 Q9H422-2;Q9H422 Q9H422-2 HIPK3 Homeodomain-interacting protein kinase 3 1 TVCS(0.005)T(0.178)Y(0.817)LQSR 154.01 0.0080204 7602100 1063.2 1375 1512.4 1451.4 1545.9 1229.2 1418.3 1084.5 1187 1028.1 TRUE FALSE 972.7692569 1285.48725 1409.742502 1563.187079 1484.32353 1298.796242 1323.687795 1075.018331 1310.392898 1155.46879 0.841882763 1.112524424 1.220061082 1.35285963 1.284607202 1.124042686 1.14558507 0.930374183 1.134079007 1 10.17426258 -7.617543139 7.546391559 1.024690667 1.168699021 0.164879836 0.135444682 0.430397146 29.78867214 0.068593356 0.039351206 2.41E-08 7.617543139 0.144008354 TVCSTY(ph)LQSR ddPTM_A459_MK2206_30min_R2 2 TVCSTYLQSR 10 0 Q9H422-2;Q9H422 Q9H422-2 HIPK3 Homeodomain-interacting protein kinase 3 1 TVCS(0.001)T(0.023)Y(0.976)LQSR;TVCS(0.012)T(0.022)Y(0.966)LQSR 159.34 0.0064382 8257100 16005.1 21417 16008.9 24003 24602 21077.8 20649 13446.7 23694 15807.5 TRUE FALSE 17230.46276 20353.46292 16542.62874 22041.87812 23636.00186 21879.93045 17937.7615 15204.22986 25754.86129 15291.70257 1.12678511 1.331013524 1.081804244 1.441427337 1.545674967 1.430836779 1.17303887 0.994279727 1.684237656 1 13.90046142 -10.72159286 4.677700811 0.999945245 1.306628532 0.1682095 0.207899609 0.000118927 2.04E-05 0.201648182 0.048898153 1.90E-11 10.72159286 0.306683287 TVDLGIS(ph)DLEDDC ddPTM_A459_MK2206_30min_R1 5 TVDLGISDLEDDC 13 0 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 TVDLGIS(1)DLEDDC;TVDLGIS(1)DLEDDC;TVDLGIS(1)DLEDDC;TVDLGIS(1)DLEDDC;TVDLGIS(1)DLEDDC 128.08 0.0017755 575060 2062.72 1890.68 2074.25 1720.14 1916.69 1945.74 1765.82 1386.87 1565.17 1371.86 TRUE FALSE 1887.274832 1767.596388 1933.455689 1852.625481 1840.344179 2055.906117 1648.02537 1374.744742 1727.875023 1541.816374 1.224059404 1.146437681 1.254011646 1.201586332 1.193620855 1.333431239 1.068885632 0.891639734 1.120674973 1 10.59041524 -7.47027728 6.879397395 0.999642861 1.219788362 0.689223745 0.068454735 0.126090197 13.78533083 0.027682968 0.018311365 3.39E-08 7.47027728 0.220145501 TVDSQGPT(ph)PVCTPT(ph)FLER ddPTM_A459_MK2206_30min_R2 1 TVDSQGPTPVCTPTFLER 18 0 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 2 TVDS(0.002)QGPT(0.998)PVCT(0.122)PT(0.878)FLER 106.75 0.021939 0 8094.8 9871.6 7484.6 7714.9 6528 7952.8 10550 7120.1 5349.1 5254 TRUE FALSE 8714.544112 9381.390699 7734.132828 7084.567991 6271.677919 8255.449377 9164.772327 8050.721517 5814.355049 5082.56241 1.714596577 1.84579941 1.52169953 1.393896901 1.233959844 1.62426916 1.803179496 1.583988718 1.143981043 1 12.31134031 -12.39722015 0.149978648 2.78E-14 1.763002211 0.468908395 0.197907307 67.37426953 1.097619365 23.09308093 1.273332752 4.01E-13 12.39722015 1.763002211 TVDSQGPT(ph)PVCTPTFLER ddPTM_A459_MK2206_30min_R2 1 TVDSQGPTPVCTPTFLER 18 0 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 T(0.021)VDS(0.029)QGPT(0.477)PVCT(0.465)PT(0.008)FLER 163.56 1.10E-05 14388000 21997 21437 16913 18298 20823 26355 31263 24302 18953 29907 TRUE FALSE 23681.10723 20372.46975 17476.87098 16802.99487 20005.38439 27357.95799 27158.13055 27478.35484 20601.49768 28931.13704 0.818533582 0.704171071 0.604085175 0.580792758 0.691482826 0.945623325 0.938716322 0.949784822 0.712087384 1 14.8203354 -6.729352363 7.570096298 0.907968562 0.670621055 0.601810024 0.093180133 0.142391775 26.54506647 0.031906199 0.031421309 1.86E-07 6.729352363 -0.237347508 TVDSQGPTPVCT(ph)PTFLER ddPTM_A459_MK2206_30min_R1 5 TVDSQGPTPVCTPTFLER 18 0 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 TVDSQGPT(0.15)PVCT(0.845)PT(0.005)FLER;TVDSQGPT(0.002)PVCT(0.995)PT(0.003)FLER;TVDSQGPT(0.003)PVCT(0.979)PT(0.018)FLER;T(0.002)VDS(0.106)QGPT(0.316)PVCT(0.553)PT(0.023)FLER;TVDSQGPT(0.003)PVCT(0.98)PT(0.016)FLER 184.21 1.12E-09 31093000 5497.64 5273.13 5216.14 4379.32 5196.01 5382.59 6574.44 5483.74 5880.12 5947.31 TRUE FALSE 5030.036849 4929.848279 4862.08295 4716.615985 4989.041919 5687.347594 6135.871103 5435.796239 6491.379516 6684.107663 0.752536779 0.737547707 0.727409431 0.705646322 0.746403585 0.85087612 0.917979095 0.813241874 0.971166212 1 12.70651926 -7.47073241 0.597292722 0.989484491 0.7171656 0.827706862 0.042373761 0.334149171 0.242803454 0.041479405 0.027263882 3.38E-08 7.47073241 -0.272318891 TVDSQGPTPVCT(ph)PTFLER ddPTM_A459_MK2206_30min_R2 3 TVDSQGPTPVCTPTFLER 18 0 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 T(0.001)VDSQGPT(0.019)PVCT(0.979)PT(0.002)FLER;TVDSQGPT(0.246)PVCT(0.72)PT(0.033)FLER;T(0.003)VDS(0.001)QGPT(0.141)PVCT(0.83)PT(0.025)FLER 160.43 3.03E-05 11399000 42368 42331 33252.5 45876 45916.9 46314.5 59704 52719 39870.1 55402.6 TRUE FALSE 45611.72666 40228.9041 34361.12175 42127.78405 44113.97179 48077.03075 51864.79308 59609.55431 43337.92923 53594.8177 0.851047333 0.750611828 0.641127692 0.786042119 0.823101443 0.89704626 0.9677203 1.112226086 0.808621637 1 15.70980589 -6.766336756 1.649295145 0.980677988 0.748829996 0.569764584 0.084376103 0.258367509 1.456584446 0.036166448 0.032798185 1.71E-07 6.766336756 -0.231847992 TVDVPASLPT(ph)PPHNNQEELR ddPTM_A459_MK2206_30min_R1 1 TVDVPASLPTPPHNNQEELR 20 0 Q8NEZ4;Q8NEZ4-3;H7BY37;Q8NEZ4-2;H0Y765;H7C2V8 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 TVDVPAS(0.002)LPT(0.998)PPHNNQEELR 110.26 0.0011423 0 1174 1028.8 1357.9 1009.3 1176.7 1119.1 1054.8 1199.9 1012.5 806.05 TRUE FALSE 1074.145135 961.824933 1265.729531 1087.036461 1129.829547 1182.462475 984.4362166 1189.409401 1117.752998 905.9095594 1.185709019 1.061722909 1.397191936 1.199939276 1.247176979 1.305276518 1.086682668 1.312944972 1.233846124 1 9.823223217 -9.879504583 9.013827027 0.999997572 1.226541858 0.331495056 0.096107311 0 0 0.090418249 0.021929646 1.32E-10 9.879504583 0.226544286 TVDVPASLPT(ph)PPHNNQEELR ddPTM_A459_MK2206_30min_R2 1 TVDVPASLPTPPHNNQEELR 20 0 Q8NEZ4;Q8NEZ4-3;H7BY37;Q8NEZ4-2;H0Y765;H7C2V8 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 TVDVPASLPT(1)PPHNNQEELR 116.94 0.00035899 6011200 39862 40385 43256 50983 46256 41830 45205 38706 37481 41045 TRUE FALSE 42913.86537 38379.53963 44698.13345 46817.52581 44439.75702 43421.86996 39269.5292 43765.0071 40741.02963 39705.70501 1.080798474 0.96660013 1.125735796 1.179113324 1.119228509 1.09359272 0.989014782 1.102234731 1.026074959 1 15.27705869 -7.15310451 11.19400372 1.037871676 1.094912238 0.226838205 0.057790897 1.039473313 101.4916358 0.023909677 0.018520279 7.03E-08 7.15310451 0.057040562 TVEDEDQDS(ph)EEEKDNDSYIK ddPTM_A459_MK2206_30min_R1 2 TVEDEDQDSEEEKDNDSYIK 20 1 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 T(0.002)VEDEDQDS(0.997)EEEKDNDS(0.001)YIK;TVEDEDQDS(0.998)EEEKDNDS(0.002)YIK 84.653 0.0013914 12499100 3260.91 3866.28 3998.25 3052.2 2632.06 2275.63 2860.32 2644.81 3499.14 3456.79 TRUE FALSE 2983.552481 3614.584469 3726.85993 3287.280973 2527.219477 2404.474204 2669.513272 2621.686705 3862.888125 3885.043243 0.767958629 0.930384617 0.959284028 0.84613755 0.650499703 0.61890539 0.687125755 0.674815322 0.99429733 1 11.92371494 -6.03625426 9.655089308 0.743285329 0.892418725 0.111748867 0.134994279 0.812584145 212.3778982 0.039448639 0.051595382 9.20E-07 6.03625426 0.149133396 TVEDEDQDS(ph)EEEKDNDSYIK ddPTM_A459_MK2206_30min_R2 3 TVEDEDQDSEEEKDNDSYIK 20 1 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 TVEDEDQDS(0.986)EEEKDNDS(0.007)Y(0.007)IK;TVEDEDQDS(0.999)EEEKDNDS(0.001)YIK;TVEDEDQDS(1)EEEKDNDSYIK 115.26 0.00014941 57667600 79111 67649 77033 58790 71527 40528.5 83481 61810 45839.1 75314 TRUE FALSE 85167.79899 64289.64903 79601.24177 53986.66894 68718.49059 42070.84047 72519.84442 69888.77923 49826.10206 72856.51035 1.168979939 0.882414608 1.092575549 0.740999928 0.943203157 0.577447921 0.995379055 0.959266082 0.683893613 1 16.15277027 -5.754325993 24.99736891 0.840661059 1.031432507 0.282170068 0.149185216 224.9891862 790632.0481 0.039121746 0.065983069 1.76E-06 5.754325993 0.190771448 TVFAEHISDECK ddPTM_A459_MK2206_30min_R2 2 TVFAEHISDECK 12 0 H7C422;H7C3M2;F8WCR1;P39023;B5MCW2;G5E9G0 H7C422;P39023 RPL3 60S ribosomal protein L3 0 ; 148.13 0.00085864 12681000 65336 154481 98399 200474 205993 210309 202208 124384 162441 109881 FALSE TRUE 70338.17439 146809.6982 101679.5735 184094.6329 197904.6798 218312.4564 175657.8467 140641.4159 176569.8246 106295.592 0.661722402 1.381145685 0.956573755 1.731912204 1.861833366 2.053824174 1.652541215 1.323116164 1.661120854 1 16.69772224 -5.761747209 24.99998892 1.656014995 1.037947024 0.431487981 0.318361631 7.549969264 613260.2723 0.08789666 0.140117583 1.73E-06 5.761747209 -0.618067971 TVFPGAVPVLPAS(ph)PPPK ddPTM_A459_MK2206_30min_R1 2 TVFPGAVPVLPASPPPK 17 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 TVFPGAVPVLPAS(1)PPPK;TVFPGAVPVLPAS(1)PPPK 135.09 0.00051739 69026000 16598.6 17526.8 18027.5 12232.1 12891.9 15154.9 17065.6 13088.3 19288.3 23713 TRUE FALSE 15186.80191 16385.80213 16803.84353 13174.21846 12378.38832 16012.95734 15927.18496 12973.87037 21293.38781 26650.74546 0.569845295 0.614834664 0.630520582 0.494328329 0.46446687 0.600844632 0.597626246 0.486810787 0.798979069 1 14.70188827 -8.494155295 3.533166818 0.998577786 0.560140213 0.868622718 0.055839765 0.069912046 2.077575351 0.057277509 0.015122339 3.21E-09 8.494155295 -0.438437573 TVFPGAVPVLPAS(ph)PPPK ddPTM_A459_MK2206_30min_R2 3 TVFPGAVPVLPASPPPK 17 0 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 TVFPGAVPVLPAS(1)PPPK;TVFPGAVPVLPAS(1)PPPK;TVFPGAVPVLPAS(1)PPPK 163.91 8.55E-06 79909600 127212 92725 94883 103632 85256 76053 104431 93343 71519 103101 TRUE FALSE 136951.4485 88120.41133 98046.35186 95164.9341 81908.42106 78947.25021 90719.08426 105543.2506 77739.59334 99736.82281 1.373128246 0.883529361 0.983050684 0.954160474 0.821245542 0.791555696 0.909584662 1.058217493 0.779447261 1 16.60583863 -4.759599424 24.99990579 0.908130853 1.373128829 0.715739314 0.087751528 25.90206201 351840.0714 0.021955442 0.137953871 1.74E-05 4.759599424 0.464997976 TVFPGAVPVLPAS(ph)PPPKDSLR ddPTM_A459_MK2206_30min_R1 2 TVFPGAVPVLPASPPPKDSLR 21 1 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 TVFPGAVPVLPAS(1)PPPKDSLR;TVFPGAVPVLPAS(1)PPPKDSLR 163.15 2.43E-08 403670000 10560.3 11478.6 11209.2 9884.5 11833.6 9361.5 10695.1 10537.5 8937.2 7627.5 TRUE FALSE 9662.091031 10731.34105 10448.35073 10645.8059 11362.24265 9891.54004 9981.649393 10445.37175 9866.253922 8572.452285 1.127109339 1.251840278 1.218828684 1.241862369 1.325436675 1.153875194 1.164386696 1.218481177 1.150925499 1 13.06549225 -9.144217931 0.613751831 0.992518425 1.225098469 0.596505852 0.053076919 1.526899101 0.902071813 0.079296695 0.022417036 7.17E-10 9.144217931 0.232580044 TVFPGAVPVLPAS(ph)PPPKDSLR ddPTM_A459_MK2206_30min_R2 2 TVFPGAVPVLPASPPPKDSLR 21 1 M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2 M0R165 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 TVFPGAVPVLPAS(1)PPPKDSLR;TVFPGAVPVLPAS(0.999)PPPKDS(0.001)LR 132.84 2.48E-05 232030000 245163 399876 342072 322353 417168 360877 396965 281889 379926 328710 TRUE FALSE 263932.8678 380018.7393 353476.5098 296015.7287 400787.8882 374610.4271 344843.0187 318732.8602 412971.2767 317984.2196 0.83001876 1.195086787 1.111616514 0.930913267 1.260401817 1.178078672 1.084465824 1.002354332 1.298716261 1 18.27859565 -4.751777806 24.97692366 1.117272839 0.830018181 0.372008779 0.112230733 420.1173613 1086003.24 0.027088852 0.34486416 1.77E-05 4.751777806 -0.287254658 TVFS(ph)PTLPAAR ddPTM_A459_MK2206_30min_R1 2 TVFSPTLPAAR 11 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 T(0.005)VFS(0.769)PT(0.225)LPAAR;T(0.291)VFS(0.385)PT(0.324)LPAAR 185.99 1.91E-05 322421000 8346.3 7697.3 7942 6490.9 8530.5 7310 8315.9 7314.2 7044.4 6989.1 TRUE FALSE 7636.403357 7196.204371 7402.919168 6990.830243 8190.712121 7723.885883 7761.161484 7250.252721 7776.690589 7854.962473 0.972175664 0.916134787 0.942451246 0.889989006 1.042743635 0.983312894 0.988058378 0.923015577 0.990035359 1 12.93938867 -6.248688201 24.99652392 0.983794221 0.930059871 0.412763893 0.033490211 862.3002334 1690392.107 0.010028266 0.012870291 5.64E-07 6.248688201 -0.053734351 TVFS(ph)PTLPAAR ddPTM_A459_MK2206_30min_R2 1 TVFSPTLPAAR 11 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 T(0.003)VFS(0.794)PT(0.203)LPAAR 156.01 0.00054173 236370000 163410 255960 179810 232180 195750 196310 288100 211520 161830 142140 TRUE FALSE 175920.7952 243249.3986 185804.7757 213210.1513 188063.8714 203780.7146 250272.1239 239166.3903 175905.6809 137501.9834 1.27940551 1.769061017 1.351287967 1.550596915 1.367717517 1.482020183 1.820134646 1.739366839 1.279295589 1 17.0690929 -7.033817504 24.96366126 1.539850866 1.473744355 0 0.251955695 3988.146466 2943987.671 0.092472445 0.071674542 9.25E-08 7.033817504 -0.066106511 TVFSNGYSSPSMRPDVS(ph)SPPSSSSTATTGPPPK ddPTM_A459_MK2206_30min_R2 1 TVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPK 33 1 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;P04150-12;P04150-13;P04150-11;P04150-14;P04150-15;P04150-16 P04150-3 NR3C1 Glucocorticoid receptor 1 TVFS(0.001)NGY(0.001)S(0.002)S(0.002)PS(0.005)MRPDVS(0.454)S(0.454)PPS(0.045)S(0.013)S(0.013)S(0.005)T(0.003)AT(0.001)TGPPPK 63.111 0.00017607 8257400 18596 22588 22514 27316 22790 24043 28152 21463 21744 23020 TRUE FALSE 20019.72406 21466.31277 23264.60552 25084.19542 21895.15009 24957.97321 24455.60858 24268.28779 23635.25382 22268.85929 0.899000878 0.96396104 1.044714739 1.126424802 0.983218305 1.120756699 1.098197634 1.089785852 1.061358982 1 14.44274004 -5.124384233 2.162260288 1.073023132 0.898355846 0.607893085 0.044633347 0.233402125 1.888770156 0.011807171 0.059211565 7.51E-06 5.124384233 -0.174667286 TVFSPT(ph)LPAAR ddPTM_A459_MK2206_30min_R2 2 TVFSPTLPAAR 11 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 T(0.015)VFS(0.223)PT(0.762)LPAAR;T(0.01)VFS(0.234)PT(0.756)LPAAR 175.74 0.00017381 76508000 142070 154736 147183 171668 139546 158746 171814 129247 124659 161279 TRUE FALSE 152946.9884 147052.0352 152090.0078 157642.1753 134066.7229 164787.1903 149254.6154 146140.0267 135501.6145 156016.4794 0.980325854 0.942541684 0.974832968 1.010420026 0.859311294 1.056216567 0.956659296 0.936696093 0.868508346 1 17.2513389 -7.755398696 4.219241112 0.92572921 0.96903118 0.067242667 0.055799087 0.481421168 19.77555471 0.029061838 0.014541991 1.76E-08 7.755398696 0.04330197 TVGGCGALPHGASCPYSQERPGAIGLDGCY(ph)SE ddPTM_A459_MK2206_30min_R1 1 TVGGCGALPHGASCPYSQERPGAIGLDGCYSE 32 1 Q8NB46 Q8NB46 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C 1 TVGGCGALPHGAS(0.108)CPY(0.146)S(0.041)QERPGAIGLDGCY(0.541)S(0.163)E 59.372 0.010334 5389500 817.67 636.26 876.93 554.78 995.87 942.76 834.44 807.55 512.02 590.81 TRUE FALSE 748.1228727 594.8393584 817.4064349 597.5092517 956.2023891 996.1382565 778.7760301 800.4896755 565.2463113 664.0040032 1.126684281 0.895837006 1.231026366 0.899857906 1.440055157 1.500199173 1.172848396 1.205549472 0.851269433 1 9.375048129 -6.244785202 24.79910196 1.219418118 1.041934309 0.121891498 0.199505912 1507.98143 2245477.026 0.060665684 0.078093339 5.69E-07 6.244785202 -0.177483809 TVGGCGALPHGASCPYSQERPGAIGLDGCYS(ph)E ddPTM_A459_MK2206_30min_R1 1 TVGGCGALPHGASCPYSQERPGAIGLDGCYSE 32 1 Q8NB46 Q8NB46 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C 1 TVGGCGALPHGASCPYSQERPGAIGLDGCY(0.001)S(0.999)E 103.55 7.07E-10 5406600 1064.7 679.69 772.76 598.94 813.87 806.47 857 780.75 682.54 759.38 TRUE FALSE 974.141674 635.4420575 720.3072042 645.0704626 781.4518345 852.1316345 799.8310937 773.9239851 753.4924755 853.4577274 1.141405887 0.744550125 0.843986973 0.755831767 0.915630393 0.998446211 0.937165448 0.90680998 0.882870295 1 9.737175887 -6.507860613 24.31818682 0.940773775 0.857332716 0.088311904 0.107355139 1077.326306 1744468.881 0.033138837 0.036309379 3.11E-07 6.507860613 -0.08344106 TVGGCGALPHGASCPYSQERPGAIGLDGCYS(ph)E ddPTM_A459_MK2206_30min_R2 1 TVGGCGALPHGASCPYSQERPGAIGLDGCYSE 32 1 Q8NB46 Q8NB46 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C 1 TVGGCGALPHGAS(0.005)CPY(0.004)S(0.023)QERPGAIGLDGCY(0.361)S(0.608)E 79.59 5.26E-06 7202700 45278 66595 55009 66054 67714 85291 75198 58005 68103 65810 TRUE FALSE 48744.51849 63287.98914 56842.9726 60657.1769 65055.20812 88536.80877 65324.41227 65586.45266 74026.47584 63662.62509 0.765669314 0.994115292 0.892878239 0.952791011 1.021874421 1.390718787 1.026103026 1.030219105 1.16279333 1 15.95815903 -6.347360531 3.352952248 1.123775707 0.904519982 0.43089718 0.117902233 0.247930617 5.357249342 0.038157223 0.044575471 4.49E-07 6.347360531 -0.219255726 TVGSTST(ph)PR ddPTM_A459_MK2206_30min_R1 1 TVGSTSTPR 9 0 B4DZM6;Q99640-4;Q99640-3;Q99640 B4DZM6 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 TVGS(0.002)T(0.002)S(0.019)T(0.977)PR 106.2 0.031118 5650700 7759.4 7782.4 4582.8 5704.2 6141 5595.4 7213.8 7156.2 1671.3 4774.4 TRUE FALSE 7099.422284 7275.764345 4271.732304 6143.538472 5896.390966 5912.206713 6732.580564 7093.634098 1845.037616 5365.888717 1.323065509 1.355929042 0.796090364 1.144924689 1.098865682 1.101813143 1.254699998 1.321986808 0.343845673 1 12.38960142 -8.248865253 24.98755443 0.671922797 1.16481496 0.470476238 0.213141154 566.8653105 1126491.645 0.142409668 0.053012409 5.64E-09 8.248865253 0.492892163 TVGT(ph)PIASVPGSTNTGTVPGSEK ddPTM_A459_MK2206_30min_R1 1 TVGTPIASVPGSTNTGTVPGSEK 23 0 A0A087WW66;Q99460-2;Q99460;H7BZR6 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 1 T(0.176)VGT(0.584)PIAS(0.24)VPGSTNTGTVPGSEK 91.1 0.00020953 10467000 4181.9 4479 4423 3267.7 3911.6 3780 4505.9 3952.6 5192.2 5584.6 TRUE FALSE 3826.207445 4187.416286 4122.779083 3519.37882 3755.792689 3994.020333 4205.319632 3918.042835 5731.94777 6276.46241 0.609612102 0.667161852 0.656863503 0.560726503 0.598393242 0.636348961 0.67001431 0.624243814 0.913244977 1 12.61573593 -8.34351241 3.276603439 0.996628812 0.627121951 0.942250312 0.032826192 0.053718315 1.050320667 0.033267636 0.009041097 4.53E-09 8.34351241 -0.369506862 TVHPNS(ph)PGIPYR ddPTM_A459_MK2206_30min_R1 1 TVHPNSPGIPYR 12 0 J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;F8VWY3;C9J102;C9JNI4 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 T(0.405)VHPNS(0.595)PGIPYR 71.545 0.039638 4974900 2862.6 3140.9 2548.5 2714.5 2989.5 2358.5 2854.5 2747.8 2469.2 2236 TRUE FALSE 2619.120838 2936.426839 2375.514921 2923.57126 2870.421885 2492.036232 2664.081513 2723.776274 2725.882176 2513.012561 1.042223536 1.168488723 0.945285733 1.163373119 1.142223453 0.991652915 1.060114683 1.083868945 1.084706944 1 11.29520217 -6.754080723 24.99372102 1.05031338 1.0923295 0.109286974 0.067710237 464.950776 1579202.259 0.022308207 0.021897668 1.76E-07 6.754080723 0.042016121 TVHRDSEEEDDY(ph)LFDDPLPIPLR ddPTM_A459_MK2206_30min_R1 1 TVHRDSEEEDDYLFDDPLPIPLR 23 1 B3KSJ7;Q96SD1-2;Q96SD1-3;Q96SD1 B3KSJ7 DCLRE1C Protein artemis 1 T(0.054)VHRDS(0.044)EEEDDY(0.903)LFDDPLPIPLR 57.806 0.036017 1512300 169.69 0 278.52 151.35 267.21 62.545 153.39 143.23 118.43 152.69 TRUE FALSE 155.2569744 0 259.6148384 163.0070032 256.5664599 66.08624385 143.157633 141.9777552 130.7412223 171.60639 0.904727233 0 1.512850649 0.94988889 1.495086867 0.385103631 0.834220876 0.827345388 0.761866865 1 7.422959464 -5.254195624 24.99967206 0.956811971 0.452363698 0.233471563 0.37506562 824.4134466 2845200.748 0.094299723 0.238875826 5.57E-06 5.254195624 -0.504448273 TVIESS(ph)PESPVTITEPYR ddPTM_A459_MK2206_30min_R1 1 TVIESSPESPVTITEPYR 18 0 Q8TEQ6 Q8TEQ6 GEMIN5 Gem-associated protein 5 1 TVIES(0.038)S(0.608)PES(0.324)PVT(0.029)IT(0.001)EPYR 107.73 0.001569 4124600 717.35 811.08 766.71 674.51 888.79 967.54 798.62 642.66 801.89 828.77 TRUE FALSE 656.3356155 758.2785446 714.6678614 726.4608771 853.3876123 1022.321279 745.345517 637.0412914 885.2493351 931.4442845 0.704642915 0.814088998 0.767268503 0.779929502 0.916198238 1.097565679 0.80020408 0.683928499 0.950405032 1 9.863325665 -6.232324489 7.781020468 0.896334254 0.769599614 0.290805208 0.107339913 0.406848879 94.42352461 0.034220826 0.043595252 5.86E-07 6.232324489 -0.12673464 TVIESSPES(ph)PVTITEPYR ddPTM_A459_MK2206_30min_R2 1 TVIESSPESPVTITEPYR 18 0 Q8TEQ6 Q8TEQ6 GEMIN5 Gem-associated protein 5 1 T(0.011)VIES(0.297)S(0.217)PES(0.473)PVT(0.002)ITEPYR 157.11 5.66E-05 0 6835.2 7245.2 7224.4 7380.8 7209.1 6835.7 9063.7 7279.1 7038.8 7678.5 TRUE FALSE 7358.508167 6885.413904 7465.25789 6777.76503 6926.034511 7095.837354 7873.625303 8230.503363 7651.022101 7427.951174 0.990651122 0.926960038 1.005022477 0.912467634 0.932428653 0.955288637 1.059999604 1.108044893 1.030031286 1 12.85874862 -7.256443662 8.095638802 1.058635268 0.951972625 0.614284921 0.03685984 0.075663631 51.66979061 0.014199928 0.010383136 5.54E-08 7.256443662 -0.106662643 TVIIEQS(ph)WGSPK ddPTM_A459_MK2206_30min_R2 1 TVIIEQSWGSPK 12 0 P10809;E7ESH4;E7EXB4;C9JL19;C9JCQ4;C9JL25;P10809-2 P10809 HSPD1 "60 kDa heat shock protein, mitochondrial" 1 T(0.112)VIIEQS(0.883)WGS(0.005)PK 188.63 0.00012455 23821000 187660 164580 168170 142510 124620 104560 186100 111720 170530 172060 TRUE FALSE 202027.3939 156407.1965 173776.7039 130866.4771 119726.7926 108539.1041 161664.8465 126322.1876 185362.3912 166445.6963 1.213773611 0.93968904 1.044044441 0.786241279 0.719314439 0.652099192 0.971276819 0.758939344 1.11365085 1 17.34469204 -4.482206514 1.066680052 0.847917518 1.583281358 0.325659956 0.143292148 3.455586528 2.112542678 0.045392726 3.35223561 3.29E-05 4.482206514 0.73536384 TVIIEQSWGSPK ddPTM_A459_MK2206_30min_R1 1 TVIIEQSWGSPK 12 0 P10809;E7ESH4;E7EXB4;C9JL19;C9JCQ4;C9JL25;P10809-2 P10809 HSPD1 "60 kDa heat shock protein, mitochondrial" 0 174.57 0.0019039 8007300 3295.1 3835.3 3332.8 3504.2 3474.2 3602.2 3124.1 3038.6 2613.7 2586.3 FALSE TRUE 3014.834442 3585.621273 3106.578822 3774.094091 3335.815257 3806.153451 2915.696989 3012.033841 2885.403468 2906.71037 1.037198089 1.233566753 1.068761048 1.298407344 1.147625609 1.309436775 1.00309168 1.036234594 0.992669754 1 11.50517161 -7.291019572 24.665732 1.011018507 1.183333985 0.51574092 0.082814037 486.8117713 405930.6092 0.032864514 0.022160685 5.12E-08 7.291019572 0.172315478 TVKEPEGPPPS(ph)PGK ddPTM_A459_MK2206_30min_R1 1 TVKEPEGPPPSPGK 14 1 P58012 P58012 FOXL2 Forkhead box protein L2 1 TVKEPEGPPPS(1)PGK 64.249 0.041499 5879400 2624.1 3143.8 3199.8 2554.7 2373.1 2053.4 2238.4 2977 2780.6 2392 TRUE FALSE 2400.906515 2939.138049 2982.606491 2751.463437 2278.574402 2169.661733 2089.08042 2950.972403 3069.65332 2688.339019 0.89308175 1.093291444 1.109460701 1.023480825 0.84757703 0.807064034 0.777089647 1.097693551 1.14184011 1 11.39249937 -6.030760749 21.49898034 0.934849809 1.042811198 0.096613627 0.123227816 264.0757473 184564.9776 0.040010721 0.051775702 9.32E-07 6.030760749 0.107961389 TVLEGSTAST(ph)SPADHSALPNQSLTVR ddPTM_A459_MK2206_30min_R1 1 TVLEGSTASTSPADHSALPNQSLTVR 26 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TVLEGS(0.008)T(0.029)AS(0.104)T(0.471)S(0.389)PADHSALPNQSLTVR 106.33 4.45E-08 14600000 939.09 834.2 747.12 677.06 927.07 874.84 888.77 743.83 537.14 629.66 TRUE FALSE 859.2154641 779.8934284 696.407576 729.2072785 890.1428388 924.3726848 829.481775 737.3267727 592.9776252 707.6670345 1.214152168 1.10206268 0.984089327 1.030438388 1.257855454 1.306225442 1.172135672 1.041911996 0.83793309 1 9.466926905 -8.001077052 4.221695591 0.920630629 1.148213987 0.470298804 0.099187456 0.202630693 8.578208499 0.073881874 0.029501022 9.98E-09 8.001077052 0.227583359 TVLEGSTAST(ph)SPADHSALPNQSLTVR ddPTM_A459_MK2206_30min_R2 1 TVLEGSTASTSPADHSALPNQSLTVR 26 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 T(0.002)VLEGS(0.038)T(0.038)AS(0.12)T(0.704)S(0.099)PADHSALPNQSLTVR 94.955 5.94E-06 15687000 8794 12364 9158.8 12397 11624 8041.4 9495.3 10585 13461 6343.5 TRUE FALSE 9467.275401 11750.02174 9464.149821 11384.12544 11167.58335 8347.421112 8248.555704 11968.49584 14631.81345 6136.512115 1.542777921 1.914772027 1.542268579 1.855145925 1.819858438 1.360287563 1.344176553 1.950374353 2.384385979 1 12.58320317 TVLPTVPES(ph)PEEEVK ddPTM_A459_MK2206_30min_R1 4 TVLPTVPESPEEEVK 15 0 O75152;E9PBY7;E9PQ61;A0A1W2PPR9 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 TVLPT(0.003)VPES(0.997)PEEEVK;TVLPTVPES(1)PEEEVK;TVLPTVPES(1)PEEEVK;TVLPT(0.064)VPES(0.936)PEEEVK 240.92 3.75E-20 47047800 13873.1 16621.9 16176.5 14531 11065.6 10279.5 12749.2 12365.2 13959.7 11733.7 TRUE FALSE 12693.11999 15539.81129 15078.48425 15650.18014 10624.83372 10861.51641 11898.72413 12257.09236 15410.86077 13187.35934 0.962521735 1.178386885 1.143404366 1.186756176 0.805683188 0.823630882 0.902282544 0.929457676 1.168608542 1 13.68686809 -6.250707724 24.91285851 0.927217978 1.123928485 0.38318114 0.110922909 709.4781606 1647007.948 0.034035097 0.043488242 5.61E-07 6.250707724 0.196710507 TVLPTVPES(ph)PEEEVK ddPTM_A459_MK2206_30min_R2 2 TVLPTVPESPEEEVK 15 0 O75152;E9PBY7;E9PQ61;A0A1W2PPR9 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 TVLPTVPES(1)PEEEVK;TVLPT(0.003)VPES(0.997)PEEEVK 156 0.00016709 8591800 63071 63993 63712 57514 61534 45048.3 69181 52014 47935 63565 TRUE FALSE 67899.76425 60815.20067 65836.12628 52814.92222 59117.86598 46762.64462 60097.4516 58812.40839 52104.29965 61490.87926 1.104224969 0.989011727 1.070664903 0.858906603 0.961408695 0.760480988 0.977339279 0.956441168 0.847350051 1 15.90808482 -5.755418641 24.99953455 0.905893767 1.048071682 0.453628539 0.073163633 130.6300341 542399.7125 0.019249249 0.032257947 1.76E-06 5.755418641 0.142177915 TVMDGGLES(ph)DGPNMTENGLEDESRPQR ddPTM_A459_MK2206_30min_R1 2 TVMDGGLESDGPNMTENGLEDESRPQR 27 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.006)VMDGGLES(0.984)DGPNMT(0.01)ENGLEDESRPQR;TVMDGGLES(0.885)DGPNMT(0.114)ENGLEDESRPQR 81.406 5.14E-05 40952300 1811.04 1774.01 1832.39 1647.69 1830.82 1620.97 1855.3 1649.84 1945.02 1890.7 TRUE FALSE 1657.001538 1658.521627 1708.012472 1774.595369 1757.894563 1712.747921 1731.536322 1635.415623 2147.211789 2124.93419 0.779789579 0.780504937 0.803795468 0.835129567 0.82727012 0.806023984 0.814865858 0.769631187 1.010483901 1 11.05320245 -8.266494314 24.99996155 1.00524199 0.803954066 0.942765886 0.020014323 99.79330935 493534.565 0.018771493 0.00543022 5.41E-09 8.266494314 -0.201287923 TVMDGGLES(ph)DGPNMTENGLEDESRPQR ddPTM_A459_MK2206_30min_R2 5 TVMDGGLESDGPNMTENGLEDESRPQR 27 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.001)VMDGGLES(0.924)DGPNMT(0.075)ENGLEDESRPQR;T(0.001)VMDGGLES(0.999)DGPNMT(0.001)ENGLEDESRPQR;T(0.111)VMDGGLES(0.704)DGPNMT(0.185)ENGLEDESRPQR;T(0.018)VMDGGLES(0.763)DGPNMT(0.218)ENGLEDESRPQR;T(0.013)VMDGGLES(0.77)DGPNMT(0.217)ENGLEDESRPQR 88.986 7.17E-05 66634600 76300.8 79500.4 75381.7 92017 95531.6 82740 86992.3 69383 75646.6 92965.5 TRUE FALSE 82142.44791 75552.52574 77894.88825 84498.91675 91780.54938 85888.72868 75570.10651 78451.59633 82226.20453 89932.04335 0.913383538 0.840106851 0.866152768 0.93958631 1.020554476 0.955040334 0.840302341 0.872343087 0.91431487 1 16.45654763 -5.757909233 24.97967339 0.92977769 0.869903617 0.214581899 0.053143297 159.931431 1131668.076 0.01609338 0.026518729 1.75E-06 5.757909233 -0.059874072 TVNVS(ph)SIR ddPTM_A459_MK2206_30min_R2 1 TVNVSSIR 8 0 Q92674 Q92674 CENPI Centromere protein I 1 T(0.004)VNVS(0.892)S(0.104)IR 86.882 0.03325 6336800 59359 67382 55158 67223 78678 69633 80683 61774 74802 82172 TRUE FALSE 63903.57068 64035.90786 56996.94019 61730.66586 75588.70639 72282.93261 70089.22518 69848.0739 81308.14275 79490.73437 0.803912194 0.805577007 0.717026212 0.776576872 0.950912166 0.909325259 0.881728238 0.878694535 1.022863147 1 16.27849909 -6.256030464 24.60825138 0.930015906 0.773705707 0.724753796 0.049495196 205.8606692 936576.5753 0.014937758 0.018712251 5.55E-07 6.256030464 -0.156310198 TVPLFPHPPVPS(ph)LSTSESKPPPQPSPPTSPVR ddPTM_A459_MK2206_30min_R1 1 TVPLFPHPPVPSLSTSESKPPPQPSPPTSPVR 32 1 E9PKC0;Q6IQ23;Q6IQ23-2;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 TVPLFPHPPVPS(0.777)LS(0.043)T(0.043)S(0.043)ES(0.043)KPPPQPS(0.036)PPT(0.007)S(0.007)PVR 48.204 0.006592 12474000 1040.8 1002.7 1231.3 1133.2 1524 1354.7 1452.4 1551.3 1565.8 1177.9 TRUE FALSE 952.2744945 937.4240478 1147.722787 1220.47926 1463.295853 1431.401943 1355.513046 1537.737148 1728.570513 1323.827145 0.719334468 0.708116654 0.866973299 0.921932493 1.105352658 1.081260457 1.023935075 1.161584542 1.305737324 1 10.37049904 -5.769567682 0.851727503 1.138516158 0.657957583 0.798014115 0.080959643 0.349494298 0.459791082 0.03655597 0.120887476 1.70E-06 5.769567682 -0.480558575 TVPLFPHPPVPSLSTSESKPPPQPS(ph)PPTSPVR ddPTM_A459_MK2206_30min_R2 1 TVPLFPHPPVPSLSTSESKPPPQPSPPTSPVR 32 1 E9PKC0;Q6IQ23;Q6IQ23-2;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 TVPLFPHPPVPS(0.107)LS(0.038)T(0.038)S(0.038)ES(0.038)KPPPQPS(0.517)PPT(0.179)S(0.047)PVR 43.992 0.010815 2465500 8790 9018.1 9159.9 11590 11888 10639 12008 8374.7 11005 9205.3 TRUE FALSE 9462.969158 8570.274268 9465.286494 10643.05993 11421.21739 11043.8746 10431.33518 9469.302045 11962.19501 8904.931815 1.0626661 0.962418853 1.06292633 1.195187133 1.282572133 1.240197548 1.171411011 1.063377266 1.343322471 1 13.12038885 -5.665210217 3.864396537 1.193859995 1.012703581 0.358642092 0.096315212 0.219787002 6.16677091 0.025920843 0.046702729 2.16E-06 5.665210217 -0.181156414 TVPST(ph)PTLVVPHR ddPTM_A459_MK2206_30min_R1 4 TVPSTPTLVVPHR 13 0 P12270 P12270 TPR Nucleoprotein TPR 1 T(0.027)VPS(0.132)T(0.839)PT(0.001)LVVPHR;TVPS(0.084)T(0.916)PT(0.001)LVVPHR;T(0.002)VPS(0.302)T(0.693)PT(0.002)LVVPHR;T(0.002)VPS(0.177)T(0.821)PTLVVPHR 123.76 0.0032418 74232500 24924.2 26173.6 18379.8 14685.9 16596 14174.3 12984.7 9973.7 9473.7 9116.6 TRUE FALSE 22804.26591 24469.69388 17132.23039 15817.01056 15934.94618 14976.83662 12118.51435 9886.500992 10458.52502 10246.03323 2.225667767 2.388211449 1.67208421 1.543720404 1.555230772 1.46172048 1.18275181 0.964910104 1.020738932 1 13.32277786 -5.054759447 0.361309863 0.917017627 3.278389517 0.91109943 0.140427321 1.447769948 0.175364864 0.140824215 1.469545376 8.82E-06 5.054759447 2.36137189 up TVPST(ph)PTLVVPHR ddPTM_A459_MK2206_30min_R2 4 TVPSTPTLVVPHR 13 0 P12270 P12270 TPR Nucleoprotein TPR 1 TVPS(0.157)T(0.842)PTLVVPHR;TVPS(0.028)T(0.972)PTLVVPHR;TVPS(0.079)T(0.919)PT(0.001)LVVPHR;TVPS(0.036)T(0.964)PTLVVPHR 151.56 0.00062682 161842000 272385 335760 300455 276318 165868 183975 122631 108184 111391 105363 TRUE FALSE 293239.005 319086.6466 310472.0197 253741.9355 159355.1889 190976.2975 106529.4024 122324.0203 121079.5878 101925.0139 2.87700726 3.130601943 3.046082681 2.489496206 1.563455159 1.873694103 1.045174273 1.20013739 1.187928097 1 16.63714863 -6.302402983 1.034849987 1.140793766 3.129255977 0.936974063 0.206477732 0.117572654 0.265420906 0.094274361 0.138579799 4.98E-07 6.302402983 1.988462211 up TVQS(ph)LEIDLDSMR ddPTM_A459_MK2206_30min_R1 2 TVQSLEIDLDSMR 13 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 T(0.004)VQS(0.996)LEIDLDSMR;TVQS(1)LEIDLDSMR 246.75 1.05E-22 22287400 1938.1 1950.9 2366.06 1630.45 2178.47 1978.72 2310.16 2312.41 2160.13 1489.39 TRUE FALSE 1773.254418 1823.896055 2205.458439 1756.027542 2091.696927 2090.753416 2156.053442 2292.192843 2384.683244 1673.906878 1.059350697 1.089604255 1.317551453 1.049059279 1.24958978 1.249026122 1.288036671 1.369367002 1.424621211 1 10.70900356 -6.452282434 5.602876075 1.286808942 1.139424507 0.205715482 0.12584873 0.332505518 19.33266649 0.038906697 0.043730588 3.53E-07 6.452282434 -0.147384434 TVQS(ph)LEIDLDSMR ddPTM_A459_MK2206_30min_R2 2 TVQSLEIDLDSMR 13 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 TVQS(0.971)LEIDLDS(0.029)MR;T(0.26)VQS(0.74)LEIDLDSMR 119.65 0.0031877 1819700 9826.6 14329.1 9241.2 11751.4 11334.5 11030.8 13394.8 12676.2 10610.9 10829.6 TRUE FALSE 10578.93205 13617.53773 9549.296996 10791.27303 10889.45058 11450.58482 11636.04667 14333.02286 11533.8169 10476.23104 1.009803241 1.299850841 0.911520275 1.030072074 1.039443531 1.093006138 1.110709245 1.368146885 1.100950987 1 13.35483216 -7.533383401 24.999033 1.18861497 1.068153748 0.080903948 0.126493791 409.0939229 973550.4242 0.057481941 0.033228848 2.93E-08 7.533383401 -0.120461222 TVQS(ph)PNSSVPSPGLAGPVTMTSVHPPIR ddPTM_A459_MK2206_30min_R1 1 TVQSPNSSVPSPGLAGPVTMTSVHPPIR 28 0 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 T(0.221)VQS(0.656)PNS(0.075)S(0.048)VPSPGLAGPVTMTSVHPPIR 141.78 5.49E-13 13972000 1193.5 751.78 1019.2 579.1 2083 1437.5 1599.7 1585.7 896.93 914.07 TRUE FALSE 1091.986558 702.8389854 950.0195437 623.7023823 2000.029699 1518.890008 1492.986932 1571.836392 990.1690832 1027.311892 1.062955239 0.68415346 0.924762529 0.607120765 1.946857341 1.478509125 1.453294703 1.530047889 0.963844661 1 10.00465854 -6.2422225 24.99921855 1.428975681 0.817563694 0.4915772 0.285591034 660.3187442 859007.8549 0.082018058 0.105722617 5.73E-07 6.2422225 -0.611411987 TVQS(ph)PNSSVPSPGLAGPVTMTSVHPPIR ddPTM_A459_MK2206_30min_R2 1 TVQSPNSSVPSPGLAGPVTMTSVHPPIR 28 0 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 T(0.169)VQS(0.493)PNS(0.169)S(0.169)VPS(0.001)PGLAGPVTMTSVHPPIR 51.858 0.012867 4808400 19936 18086 14841 20182 20501 17473 21978 18132 15090 20848 TRUE FALSE 21462.31549 17187.87554 15335.79153 18533.06604 19696.02773 18137.94726 19092.2622 20501.91466 16402.50092 20167.73147 1.06419086 0.85224635 0.760412323 0.91894649 0.976610967 0.899354857 0.946673761 1.016570192 0.813304211 1 14.29976119 -5.990683285 24.99559622 0.94162266 0.880179496 0.055541329 0.088040645 526.797818 1413318.721 0.024641218 0.036495663 1.02E-06 5.990683285 -0.061443164 TVQSLEIDLDS(ph)MR ddPTM_A459_MK2206_30min_R1 2 TVQSLEIDLDSMR 13 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 T(0.001)VQS(0.091)LEIDLDS(0.907)MR;TVQS(0.011)LEIDLDS(0.989)MR 172.58 0.00017208 23937900 2570.2 2605.6 2481.8 1972.28 2773.2 2198.73 2772.6 2430.8 2115.87 1992.01 TRUE FALSE 2351.590993 2435.974966 2313.342331 2124.185347 2662.737572 2323.220192 2587.644913 2409.547772 2335.822258 2238.795238 1.050382346 1.088074034 1.033297861 0.948807337 1.189361817 1.037709994 1.155820269 1.076269831 1.043338944 1 11.12850687 -3.648500007 10.77450224 1.06662579 0.605091018 0 0.066817667 15934859.12 0 0.015339731 0 0.000224647 3.648500007 -0.461534772 TVQSLEIDLDSMR ddPTM_A459_MK2206_30min_R1 3 TVQSLEIDLDSMR 13 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 ;; 313.52 6.39E-87 103466000 7194.8 8190.4 8876.1 7704.7 7972.6 7821.2 8803.2 8519.4 6168.3 6872.8 FALSE TRUE 6582.844479 7657.203471 8273.615062 8298.117329 7655.03446 8264.029585 8215.95459 8444.915784 6809.516858 7724.254351 0.852230413 0.991319437 1.07112152 1.074293641 0.991038631 1.069880562 1.063656661 1.093298511 0.881575949 1 12.91517996 -4.799205349 3.168049688 1.036579539 0.828884166 0.444784157 0.059354458 0.28262927 4.393197398 0.014568269 0.144356567 1.59E-05 4.799205349 -0.207695373 TVQSLEIDLDSMR ddPTM_A459_MK2206_30min_R2 2 TVQSLEIDLDSMR 13 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 ; 191.48 0.0023786 41193000 28640 35930 34158 39113 40993 33711 38984 35538 31671 36732 FALSE TRUE 30832.70042 34145.76845 35296.81067 35917.34278 39383.40885 34993.89573 33865.35397 40182.93862 34425.68633 35533.43785 0.867709467 0.960947505 0.993340718 1.010804047 1.108347833 0.984815932 0.953055939 1.130848605 0.968825096 1 15.11688966 -4.64691949 1.188601918 1.026249508 0.75797469 0.431472165 0.054062075 1.867382978 1.82848666 0.016231503 0.670591448 2.25E-05 4.64691949 -0.268274817 TVQSPNS(ph)SVPSPGLAGPVTMTSVHPPIR ddPTM_A459_MK2206_30min_R1 1 TVQSPNSSVPSPGLAGPVTMTSVHPPIR 28 0 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 T(0.022)VQS(0.048)PNS(0.464)S(0.464)VPS(0.001)PGLAGPVTMTSVHPPIR 74.861 6.98E-05 7631500 2410.2 1954.1 2427.5 1926.6 2863.2 2527.7 2644.6 2368.9 1811.7 1916.8 TRUE FALSE 2205.199834 1826.887735 2262.728063 2074.987066 2749.152681 2670.81619 2468.183559 2348.188957 2000.032698 2154.267655 1.023642456 0.84803192 1.050346765 0.963198357 1.276142579 1.239779181 1.145718153 1.090017274 0.928404924 1 11.07298179 -6.205530635 24.9341789 1.125785136 0.968145355 0.289691622 0.107864841 357.6205964 159491.1204 0.033257677 0.042935464 6.23E-07 6.205530635 -0.157639781 TVQTDHNAVQR ddPTM_A459_MK2206_30min_R1 1 TVQTDHNAVQR 11 0 O43747;O43747-2 O43747 AP1G1 AP-1 complex subunit gamma-1 0 175.49 0.00010643 1542900 1383 1505.4 1785.6 1528 1431.1 1629.9 1796.6 1608.7 874.22 1231 FALSE TRUE 1265.368588 1407.398186 1664.398447 1645.686825 1374.096257 1722.183529 1676.752092 1594.635306 965.0982974 1383.505574 0.914610401 1.017269618 1.20302981 1.18950502 0.993198931 1.244796958 1.211959044 1.152604902 0.697574564 1 10.43411274 -8.244947745 24.87962214 0.848787276 1.121356125 0.429198296 0.123073366 611.9693012 923233.4736 0.084492801 0.031725021 5.69E-09 8.244947745 0.27256885 TVS(ph)ASSTGDLPK ddPTM_A459_MK2206_30min_R2 1 TVSASSTGDLPK 12 0 P78362;H7C5L6;P78362-2 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 1 T(0.382)VS(0.546)AS(0.013)S(0.025)T(0.034)GDLPK 89.189 0.02612 6299100 30077 33958 35807 35593 27011 33358 38608 30228 39142 42766 TRUE FALSE 32379.71825 32271.6951 37000.78751 32684.93804 25950.41242 34627.46207 33538.72322 34178.90339 42546.50041 41370.54892 0.782675577 0.780064465 0.894375068 0.790053284 0.627267781 0.837007557 0.810690796 0.826165093 1.028424846 1 15.33631648 -8.194476655 3.711336603 1.017721104 0.789817643 0.657392675 0.064037471 0.146489208 3.792132339 0.054764728 0.017554412 6.39E-09 8.194476655 -0.227903462 TVS(ph)DNSLSNSR ddPTM_A459_MK2206_30min_R1 2 TVSDNSLSNSR 11 0 H0Y7W6;B7ZL14;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 H0Y7W6;Q96RU3-5 FNBP1 Formin-binding protein 1 1 TVS(0.591)DNS(0.402)LS(0.007)NSR;T(0.16)VS(0.619)DNS(0.221)LSNSR 164.13 0.00064726 94819000 5535.3 6225.4 6130.9 5748.9 7304.4 5454.4 6603.1 5715.2 5242.3 5157.5 TRUE FALSE 5064.493668 5820.125328 5714.75159 6191.681274 7013.450281 5763.223414 6162.619247 5665.232609 5787.255845 5796.450037 0.873723337 1.004084447 0.985905434 1.06818505 1.209956134 0.994267763 1.063171287 0.97736245 0.998413824 1 12.50095389 -4.469878936 1.335474734 1.044823223 0.676468193 0.364051719 0.064965355 3.102781732 2.864636339 0.019985383 1.89578784 3.39E-05 4.469878936 -0.368355031 TVS(ph)DNSLSNSR ddPTM_A459_MK2206_30min_R2 2 TVSDNSLSNSR 11 0 H0Y7W6;B7ZL14;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 H0Y7W6;Q96RU3-5 FNBP1 Formin-binding protein 1 1 T(0.081)VS(0.907)DNS(0.012)LSNSR;T(0.082)VS(0.734)DNS(0.182)LS(0.001)NSR 168.82 0.00045689 105386000 48374 46132 43844 56312 45161 51901 58548 41599 36501 49234 TRUE FALSE 52077.55063 43841.15196 45305.73708 51711.12947 43387.75222 53876.12892 50860.57727 47036.13213 39675.791 47627.49861 1.093434511 0.920500829 0.951251659 1.085741031 0.910981124 1.131197953 1.067882605 0.987583507 0.83304377 1 15.53950716 -8.015247017 23.86916106 0.914452427 1.019218142 0.213910461 0.080539823 571.1232113 894083.778 0.050042429 0.020326326 9.66E-09 8.015247017 0.104765715 TVS(ph)DSIK ddPTM_A459_MK2206_30min_R2 1 TVSDSIK 7 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 T(0.001)VS(0.999)DSIK 83.998 0.038249 12092000 76267 62038 80527 67163 74920 43988 92934 62497 46461 80060 TRUE FALSE 82106.06016 58957.28313 83211.72999 61675.56806 71978.26436 45661.99416 80731.65417 70665.57248 50502.0938 77447.64876 1.060149165 0.761253364 1.074425516 0.796351717 0.929379594 0.589585286 1.042402907 0.912430185 0.6520804 1 16.24093382 -4.741085008 24.39859374 0.863071952 1.060150116 0.129949763 0.153799602 2330.240514 2793040.374 0.036340029 1.441038137 1.82E-05 4.741085008 0.197078164 TVS(ph)EPNLK ddPTM_A459_MK2206_30min_R1 1 TVSEPNLK 8 0 J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;F8VWY3;C9JEB6;H0YI41;C9JAH2;C9JF80 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 T(0.008)VS(0.992)EPNLK 133.23 0.0031143 45593000 6948.4 6149.3 5923.7 5603.2 6046 5354 5770.4 6314 5694.3 5559.4 TRUE FALSE 6357.402092 5748.979452 5521.615748 6034.759435 5805.175017 5657.138853 5385.467145 6258.797364 6286.242862 6248.140443 1.017487067 0.920110472 0.883721453 0.965848878 0.929104438 0.905411603 0.861931193 1.001705615 1.006098201 1 12.60921117 -7.845539167 12.4237355 1.003162043 0.925204913 0.4282087 0.040429159 0.623014585 89.25664631 0.022408215 0.010762362 1.43E-08 7.845539167 -0.07795713 TVS(ph)EPNLK ddPTM_A459_MK2206_30min_R2 3 TVSEPNLK 8 0 J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;F8VWY3;C9JEB6;H0YI41;C9JAH2;C9JF80 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 T(0.284)VS(0.716)EPNLK;T(0.236)VS(0.764)EPNLK;T(0.231)VS(0.769)EPNLK 114.4 0.010337 82411000 287242 328333 282918 307529 311668 229292 307866 277883 263398 308491 TRUE FALSE 309233.4684 312028.4607 292350.3449 282402.897 299430.3483 238017.8677 267442.8244 314203.2622 286307.8819 298424.9639 1.0362185 1.045584312 0.979644401 0.946311238 1.003368969 0.797580285 0.89618114 1.052871911 0.959396554 1 18.1870087 -5.42949166 2.258721719 0.945963737 1.04411753 0.225878901 0.065187926 0.488855732 4.786113194 0.019808236 0.054199768 3.72E-06 5.42949166 0.098153793 TVS(ph)FEALPIMR ddPTM_A459_MK2206_30min_R2 3 TVSFEALPIMR 11 0 O15084-2;O15084;O15084-4;O15084-1 O15084-2 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A 1 T(0.127)VS(0.873)FEALPIMR;T(0.083)VS(0.917)FEALPIMR;T(0.343)VS(0.657)FEALPIMR 109.72 0.0092334 6167100 31255.8 34303 26560.1 32842.1 26270.3 26606.3 31981.4 24447.6 24302.8 22904 TRUE FALSE 33648.76808 32599.5629 27445.60048 30158.79537 25238.79602 27618.82139 27782.20376 27642.98526 26416.61361 22156.64436 1.518676183 1.471322208 1.238707452 1.361162588 1.139107331 1.246525464 1.253899432 1.247616057 1.192265994 1 14.43545178 -1.522878745 0.232051211 1.108075433 3.435228635 0.727265815 0.075490766 28.46571584 0.374250047 0.110166609 25.23263049 0.03 1.522878745 2.327153202 TVS(ph)PGS(ph)VSPIHGQGQVVENLK ddPTM_A459_MK2206_30min_R1 2 TVSPGSVSPIHGQGQVVENLK 21 0 A0A087WVF7;Q9NZM3-2;Q9NZM3;Q9NZM3-4;Q9NZM3-3 A0A087WVF7 ITSN2 Intersectin-2 2 T(0.152)VS(0.695)PGS(0.638)VS(0.515)PIHGQGQVVENLK;T(0.089)VS(0.855)PGS(0.65)VS(0.406)PIHGQGQVVENLK 126.1 0.00026657 43960000 12362 14048 15056.9 12878.2 12945 11993.9 13169.8 13407.2 11510.9 10483.8 TRUE FALSE 11310.54698 13133.47265 14034.87958 13870.0812 12429.37324 12672.98425 12291.26667 13289.98226 12707.49925 11782.61229 0.959935429 1.11464863 1.191151778 1.177165203 1.054891134 1.075566601 1.043169916 1.12793173 1.078495917 1 13.52437181 -6.333393582 24.99980785 1.069341674 1.116752629 0.104586917 0.065603651 369.2788131 128300.6687 0.021218631 0.024059667 4.64E-07 6.333393582 0.047410955 TVS(ph)PGSVSPIHGQGQVVENLK ddPTM_A459_MK2206_30min_R2 1 TVSPGSVSPIHGQGQVVENLK 21 0 A0A087WVF7;Q9NZM3-2;Q9NZM3;Q9NZM3-4;Q9NZM3-3 A0A087WVF7 ITSN2 Intersectin-2 1 T(0.099)VS(0.52)PGS(0.285)VS(0.096)PIHGQGQVVENLK 103.53 0.00012034 23341000 63770 104420 83912 141430 130780 121440 113370 89800 92897 79196 TRUE FALSE 68652.28023 99234.65464 86709.5842 129874.7166 125644.9201 126061.4843 98484.38282 101537.1683 100977.0131 76611.84101 0.896105345 1.295291346 1.131803949 1.695230331 1.64001959 1.645456925 1.285498188 1.325345625 1.318034025 1 16.22527977 -5.67975048 12.31635476 1.442661311 1.125743862 0.288835646 0.218017389 0.803118894 117.66185 0.060199089 0.104277502 2.09E-06 5.67975048 -0.316917449 TVS(ph)PSTIR ddPTM_A459_MK2206_30min_R1 2 TVSPSTIR 8 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 T(0.001)VS(0.967)PS(0.033)TIR;T(0.001)VS(0.952)PS(0.047)TIR 118.71 0.0082341 126189000 11831.8 11097.4 11148.3 9299.5 12132.6 10415.4 12250.3 10983.8 10349.6 9354.8 TRUE FALSE 10825.44328 10374.95724 10391.58446 10015.7491 11649.33285 11005.11095 11433.10484 10887.76979 11425.47796 10513.74325 1.029646913 0.986799563 0.988381037 0.952633982 1.108010018 1.046735752 1.087443793 1.035575012 1.086718373 1 13.35998879 -6.257494069 24.99815612 1.06316017 0.989111792 0.522226569 0.033400168 255.5451884 1619178.583 0.009450616 0.011734162 5.53E-07 6.257494069 -0.074048378 TVS(ph)PSTIR ddPTM_A459_MK2206_30min_R2 2 TVSPSTIR 8 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 T(0.008)VS(0.947)PS(0.044)T(0.001)IR;TVS(0.948)PS(0.037)T(0.015)IR 106.18 0.013838 119610000 179984 189433 166339 218620 200035 212368 236048 172039 189826 194493 TRUE FALSE 193763.7134 180026.0327 171884.6592 200758.0467 192180.6208 220449.8131 205054.6141 194525.088 206336.7224 188146.7093 1.029854384 0.956838593 0.913567183 1.067029274 1.021440245 1.171691037 1.089865535 1.033901091 1.096679942 1 17.52149853 -5.82286615 9.105375817 1.073514647 0.965899385 0.444283656 0.052033891 0.271068476 37.42585577 0.014789262 0.022013539 1.50E-06 5.82286615 -0.107615262 TVS(ph)QQSFDGVSLDSSGPEDR ddPTM_A459_MK2206_30min_R1 1 TVSQQSFDGVSLDSSGPEDR 20 0 H7C1J4;Q6BDS2 H7C1J4 UHRF1BP1 UHRF1-binding protein 1 1 T(0.004)VS(0.994)QQS(0.002)FDGVSLDSSGPEDR 181.87 1.80E-13 6180800 416.93 360.57 439.33 470.89 383.85 430.94 504.6 510.84 322.15 340.64 TRUE FALSE 381.4679141 337.0968275 409.5095036 507.1580294 368.5604417 455.3394504 470.9390547 506.3737797 355.6386453 382.8410549 0.996413288 0.880513788 1.069659323 1.324722161 0.962698323 1.189369438 1.230116386 1.322673661 0.928945944 1 8.580601739 -5.516148579 24.70454833 1.152877578 0.947619248 0.247106305 0.134991792 305.6602813 1121990.499 0.035036211 0.063757763 3.05E-06 5.516148579 -0.20525833 TVS(ph)QQSFDGVSLDSSGPEDR ddPTM_A459_MK2206_30min_R2 1 TVSQQSFDGVSLDSSGPEDR 20 0 H7C1J4;Q6BDS2 H7C1J4 UHRF1BP1 UHRF1-binding protein 1 1 T(0.016)VS(0.904)QQS(0.078)FDGVS(0.002)LDSSGPEDR 299.6 1.74E-100 5825000 14252 22446 12025 18863 20638 20282 21407 16109 13829 13017 TRUE FALSE 15343.14408 21331.36428 12425.9075 17321.83256 19827.64842 21053.84572 18596.23519 18214.50161 15031.82142 12592.25636 1.218458682 1.694006513 0.986789591 1.375594021 1.574590595 1.671967686 1.476799285 1.446484339 1.19373534 1 13.6202492 -8.469339969 2.773956982 1.002495629 1.437676433 0.329916091 0.199290827 0.291035179 4.892609736 0.194214365 0.05237064 3.39E-09 8.469339969 0.435180804 TVS(ph)SPIPYTPSPSSSR ddPTM_A459_MK2206_30min_R1 1 TVSSPIPYTPSPSSSR 16 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 T(0.002)VS(0.593)S(0.405)PIPYT(0.001)PSPSSSR 165.64 1.78E-05 3137700 837.51 772.23 743.82 612.49 633.19 710.08 1101.6 559.52 909.03 928.7 TRUE FALSE 766.2753766 721.9576866 693.3315708 659.6640859 607.9687015 750.284116 1028.114274 554.6281756 1003.526921 1043.754367 0.734152978 0.691693093 0.664266989 0.632010851 0.582482546 0.718832073 0.985015542 0.531378065 0.961458896 1 10.02756652 -7.011936342 24.36786936 0.833484528 0.660155233 0.350309843 0.131014185 534.0239032 1090201.613 0.046212819 0.037861548 9.73E-08 7.011936342 -0.173329295 TVS(ph)SPIPYTPSPSSSR ddPTM_A459_MK2206_30min_R2 1 TVSSPIPYTPSPSSSR 16 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 T(0.218)VS(0.391)S(0.391)PIPYTPSPSSSR 252.12 1.44E-29 35390000 86293 76442 69149 75595 63165 60634 86393 76824 55002 88717 TRUE FALSE 92899.65843 72646.00144 71454.39315 69418.64668 60684.82472 62941.46936 75049.49532 86865.16058 59785.97454 85822.17156 1.082466882 0.846471257 0.832586636 0.808866117 0.707099618 0.733394043 0.874476769 1.012152909 0.696626215 1 16.38906279 -10.49013971 15.09643849 0.999994682 0.841102024 0.135075961 0.118406368 0 0 0.116299459 0.028206762 3.23E-11 10.49013971 -0.158892658 TVS(ph)SPPTSPR ddPTM_A459_MK2206_30min_R2 1 TVSSPPTSPR 10 0 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 1 TVS(0.495)S(0.495)PPT(0.009)SPR 103.31 0.014356 18815000 227390 215410 180090 221030 165660 197500 240770 235310 143250 249430 TRUE FALSE 244799.1532 204713.0526 186094.1107 202971.142 159155.356 205016.0009 209156.6098 266065.8249 155709.6261 241291.1195 1.014538594 0.848406908 0.771243099 0.841187783 0.659598896 0.849662438 0.866822659 1.102675579 0.645318511 1 17.88041529 -7.527328271 24.99856208 0.921348026 0.824618109 0.07236424 0.135231583 322.5800451 1812291.389 0.061409771 0.035633529 2.97E-08 7.527328271 -0.096729918 TVSAS(ph)STGDLPK ddPTM_A459_MK2206_30min_R2 4 TVSASSTGDLPK 12 0 P78362;H7C5L6;P78362-2 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 1 TVSAS(0.642)S(0.353)T(0.005)GDLPK;TVS(0.139)AS(0.846)S(0.012)T(0.004)GDLPK;TVS(0.001)AS(0.498)S(0.412)T(0.089)GDLPK;TVS(0.119)AS(0.854)S(0.013)T(0.013)GDLPK 190.34 0.00013561 39177000 205744 225527 213254 209187 188941 169811 237751 196935 207054 237789 TRUE FALSE 221495.9188 214327.6571 220363.7819 192095.7529 181522.227 176273.2766 206534.0081 222675.0807 225063.1827 230029.9644 0.962900287 0.931737992 0.957978594 0.83509013 0.789124267 0.766305716 0.897856975 0.96802641 0.97840811 1 17.81146228 -7.738775629 3.799146023 0.983098378 0.871836519 0.37619382 0.06255097 0.276563538 8.536807933 0.039944765 0.019964845 1.82E-08 7.738775629 -0.111261859 TVSASS(ph)TGDLPK ddPTM_A459_MK2206_30min_R1 3 TVSASSTGDLPK 12 0 P78362;H7C5L6;P78362-2 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 1 TVSAS(0.031)S(0.921)T(0.048)GDLPK;TVSAS(0.028)S(0.969)T(0.003)GDLPK;TVSAS(0.005)S(0.992)T(0.002)GDLPK 238.07 3.34E-13 77402500 17606 19145.9 19018.9 17200.6 16989.9 14756.4 16319.6 15666.6 15545.2 14699.8 TRUE FALSE 16108.51725 17899.49843 17727.95006 18525.39319 16313.15631 15591.89462 15230.94926 15529.62857 17161.17917 16520.9222 0.975037413 1.083444266 1.073060562 1.121329243 0.987424074 0.943766602 0.92191883 0.939997682 1.038754312 1 14.0120066 -6.441159345 6.170912822 0.962483013 1.064973837 0.483164276 0.046282544 0.19187018 11.68337527 0.014671665 0.01656504 3.62E-07 6.441159345 0.102490824 TVSASS(ph)TGDLPK ddPTM_A459_MK2206_30min_R2 2 TVSASSTGDLPK 12 0 P78362;H7C5L6;P78362-2 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 1 TVSAS(0.003)S(0.996)TGDLPK;TVSAS(0.023)S(0.976)T(0.001)GDLPK 237.07 3.75E-13 48793000 303080 325920 326360 295500 328540 258580 357980 285390 279810 317280 TRUE FALSE 326284.0378 309735.2867 337240.6795 271356.7047 315639.8688 268420.4431 310976.796 322691.4529 304147.368 306927.1796 1.063066615 1.009149099 1.098764469 0.884107771 1.028386829 0.874541132 1.013194063 1.051361607 0.990943091 1 18.22753688 -5.733934239 24.99999154 0.978961874 1.052208934 0.282529043 0.057864523 311.8529 283447.2391 0.015599037 0.02701011 1.85E-06 5.733934239 0.073247061 TVSASST(ph)GDLPK ddPTM_A459_MK2206_30min_R2 1 TVSASSTGDLPK 12 0 P78362;H7C5L6;P78362-2 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 1 TVSAS(0.001)S(0.178)T(0.82)GDLPK 126.66 0.0063226 22032000 62768 59249 69258 77177 69291 64687 81625 57769 58505 77904 TRUE FALSE 67573.56634 56306.78082 71567.02715 70871.39222 66570.28718 67148.70911 70907.53945 65319.60665 63593.65915 75361.99886 0.896653053 0.747150841 0.949643431 0.940412851 0.883340254 0.8910155 0.940892499 0.866744615 0.843842522 1 16.20154961 TVSDNSLS(ph)NSR ddPTM_A459_MK2206_30min_R2 1 TVSDNSLSNSR 11 0 H0Y7W6;B7ZL14;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 H0Y7W6;Q96RU3-5 FNBP1 Formin-binding protein 1 1 T(0.008)VS(0.116)DNS(0.369)LS(0.507)NSR 87.641 0.03612 0 9178.5 10676 13437 10523 11972 13950 13418 14069 13193 8803.2 TRUE FALSE 9881.213017 10145.84536 13884.98287 9663.237239 11501.91913 14480.87703 11656.20048 15907.86661 14340.50329 8515.952305 1.160318032 1.19139293 1.630467431 1.13472186 1.350632168 1.700441302 1.368748916 1.86800795 1.683957681 1 13.05595215 -6.619542799 6.489907542 1.567559053 1.291524478 0.163285065 0.254977246 0.338855842 19.29974441 0.081710897 0.081610205 2.40E-07 6.619542799 -0.276034575 TVSFS(ph)SMPTEK ddPTM_A459_MK2206_30min_R1 1 TVSFSSMPTEK 11 0 Q9UPR0 Q9UPR0 PLCL2 Inactive phospholipase C-like protein 2 1 TVS(0.018)FS(0.491)S(0.491)MPTEK 91.701 0.026047 10712000 2980.9 3245.3 2667.8 2371.7 3044.7 2891.6 3015.4 2646.4 3047.6 3109.8 TRUE FALSE 2727.358802 3034.03038 2486.717169 2554.368745 2923.423152 3055.319893 2814.248168 2623.262804 3364.408926 3495.065502 0.780345547 0.868089705 0.711493724 0.730850035 0.836443022 0.874181011 0.80520613 0.750561843 0.962616845 1 11.77110378 -8.352198499 5.037914576 0.994481696 0.796780258 0.673486792 0.052107617 0.140125504 5.577496758 0.052880152 0.013869618 4.44E-09 8.352198499 -0.197701438 TVSGPGT(ph)PEPR ddPTM_A459_MK2206_30min_R1 2 TVSGPGTPEPR 11 0 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 1 T(0.014)VS(0.009)GPGT(0.977)PEPR;T(0.039)VS(0.025)GPGT(0.936)PEPR 137.4 0.0031256 16780500 5353.3 5786.8 5649.7 4661.9 5417.9 6098.1 6761.1 5432.5 6893.4 7400 TRUE FALSE 4897.973724 5410.078268 5266.214105 5020.960346 5202.09357 6443.369152 6310.079355 5385.004225 7609.993598 8316.767867 0.58892755 0.650502497 0.633204412 0.603715341 0.625494622 0.774744378 0.758717744 0.647487619 0.915018156 1 13.02180725 -8.400516637 0.411817651 1.024664706 0.601921315 0.796324061 0.060242402 0.547226911 0.254437681 0.085532049 0.048814543 3.98E-09 8.400516637 -0.422743391 TVSGPGTPEPRPAT(ph)PGASSVEQLRK ddPTM_A459_MK2206_30min_R1 1 TVSGPGTPEPRPATPGASSVEQLRK 25 2 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 1 TVSGPGT(0.021)PEPRPAT(0.968)PGAS(0.005)S(0.005)VEQLRK 61.345 0.01876 10706000 3061.3 3634.5 3156.1 3376.7 2525.4 1764 2182.4 2545.2 1378 1422.3 TRUE FALSE 2800.920359 3397.893389 2941.872725 3636.774019 2424.80797 1863.876156 2036.816078 2522.947585 1521.248031 1598.505262 1.752212161 2.125669193 1.840389766 2.275109195 1.516922107 1.166011899 1.274200421 1.578316722 0.95166908 1 10.64250778 -6.475981616 4.500413728 1.241404796 1.993415515 0.76202342 0.210856156 0.103638203 4.579481544 0.065166454 0.071855403 3.34E-07 6.475981616 0.752010719 TVSGPGTPEPRPAT(ph)PGASSVEQLRK ddPTM_A459_MK2206_30min_R2 2 TVSGPGTPEPRPATPGASSVEQLRK 25 2 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 1 TVS(0.004)GPGT(0.163)PEPRPAT(0.804)PGAS(0.015)S(0.015)VEQLRK;TVSGPGTPEPRPAT(0.604)PGAS(0.317)S(0.079)VEQLRK 70.358 0.0037466 15205400 10464.4 34726 25221 36246 46622 41427 36478 21641.5 47415 23725.4 TRUE FALSE 11265.56251 33001.55734 26061.85555 33284.58585 44791.38602 43003.53351 31688.39478 24470.11836 51539.07099 22951.24214 0.490847617 1.43789853 1.135531375 1.45023026 1.951588753 1.873690899 1.380683215 1.066178388 2.245589615 1 14.48628462 -4.648610551 1.251587419 1.565855978 1.41E-19 0.36736503 0.390939073 2.174582333 2.393685184 0.115394948 4.765182619 2.25E-05 4.648610551 -1.565855978 TVSLGAGAKDELHIVEAEAMNY(ph)EGSPIK ddPTM_A459_MK2206_30min_R1 1 TVSLGAGAKDELHIVEAEAMNYEGSPIK 28 1 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 TVSLGAGAKDELHIVEAEAMNY(0.705)EGS(0.294)PIK 49.765 0.038906 4912100 572.14 580.77 541.84 360.09 404.2 495.56 508.94 559.24 538.88 300.39 TRUE FALSE 523.4764886 542.9617674 505.0614105 387.8241942 388.0998581 523.6181789 474.9895412 554.3506236 594.8985044 337.604581 1.550560976 1.608277251 1.496014684 1.14875276 1.149569289 1.550980669 1.40694045 1.642011557 1.762116209 1 8.39919067 -7.691980349 24.97275781 1.526551384 1.411033467 0 0.23841765 174.3603551 62685.41974 0.114349354 0.06601959 2.03E-08 7.691980349 -0.115517918 TVSLGAGAKDELHIVEAEAMNYEGS(ph)PIK ddPTM_A459_MK2206_30min_R1 9 TVSLGAGAKDELHIVEAEAMNYEGSPIK 28 1 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 TVSLGAGAKDELHIVEAEAMNY(0.004)EGS(0.996)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNY(0.012)EGS(0.988)PIK;TVSLGAGAKDELHIVEAEAMNY(0.201)EGS(0.799)PIK;TVSLGAGAKDELHIVEAEAMNY(0.153)EGS(0.847)PIK;TVSLGAGAKDELHIVEAEAMNY(0.01)EGS(0.99)PIK;TVSLGAGAKDELHIVEAEAMNY(0.081)EGS(0.919)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK 133.29 1.14E-12 147553000 41986.4 46270 47497.6 38331 37191.17 37757.9 41208.8 40022.6 42003.5 35630.6 TRUE FALSE 38415.2362 43257.81459 44273.59525 41283.26026 35709.76695 39895.71967 38459.83614 39672.68663 46369.91414 40044.78773 0.959306776 1.080235832 1.105601946 1.030927184 0.891745692 0.996277467 0.960420527 0.990707877 1.157951303 1 15.28932685 -6.00808339 24.89236197 0.993699426 1.054349891 0.084111256 0.071320453 785.6938432 2419520.191 0.020814089 0.029359455 9.82E-07 6.00808339 0.060650465 TVSLGAGAKDELHIVEAEAMNYEGS(ph)PIK ddPTM_A459_MK2206_30min_R2 2 TVSLGAGAKDELHIVEAEAMNYEGSPIK 28 1 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 TVSLGAGAKDELHIVEAEAMNY(0.061)EGS(0.939)PIK;TVSLGAGAKDELHIVEAEAMNY(0.017)EGS(0.983)PIK 48.224 0.016007 12442800 57852 72610 69871 71819 73433 58252 93465 71002 58852 80858 TRUE FALSE 62281.1936 69004.29298 72200.46427 65951.15796 70549.65145 60468.82068 81192.93323 80282.20519 63970.84058 78219.61008 0.79623503 0.882186614 0.923048123 0.843153755 0.901943277 0.773064716 1.038012503 1.026369284 0.817836352 1 16.25524272 -7.268017114 24.99783157 0.972751972 0.859510287 0.395979681 0.07069019 580.9035233 2207639.355 0.028690391 0.019854811 5.39E-08 7.268017114 -0.113241686 TVSLGAGAKDELHIVEAEAMNYEGS(ph)PIKVTLATLK ddPTM_A459_MK2206_30min_R1 2 TVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLK 35 2 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 1 TVSLGAGAKDELHIVEAEAMNY(0.456)EGS(0.539)PIKVT(0.003)LAT(0.001)LK;TVSLGAGAKDELHIVEAEAMNY(0.142)EGS(0.818)PIKVT(0.016)LAT(0.024)LK 77.276 1.78E-06 220651000 13780.1 14513.1 15046.3 15305 14971.2 12187.5 10871.3 14522.3 8780.1 5604.9 TRUE FALSE 12608.03013 13568.29455 14024.99908 16483.79375 14374.8654 12877.54572 10146.09541 14395.33306 9692.822815 6299.277327 2.001504217 2.153944627 2.226445725 2.616775369 2.281986434 2.044289376 1.610676096 2.285235641 1.538719811 1 12.62097061 -8.71036856 0.561444261 0.968213286 2.25302036 0.696780697 0.244827282 0.682311248 0.472922946 0.296411168 0.121609311 1.95E-09 8.71036856 1.284807074 TVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLK ddPTM_A459_MK2206_30min_R1 1 TVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLK 35 2 P06748-2;P06748;P06748-3 P06748-2 NPM1 Nucleophosmin 0 99.971 4.03E-12 20220000 6955 7637.7 7452.1 8053.6 7213 5281 5481.7 7468.6 4708.8 3142.3 FALSE TRUE 6363.440728 7140.484342 6946.272215 8673.889667 6925.690936 5580.005656 5116.025795 7403.302818 5198.296611 3531.591847 1.801861881 2.02188833 1.966895529 2.456084973 1.961067767 1.580025637 1.448645828 2.096307597 1.471941503 1 11.7861029 -6.701967089 4.587181199 1.582019622 2.068049767 0.434234274 0.294879829 0.222988098 9.431615176 0.099401701 0.09718377 1.99E-07 6.701967089 0.486030145 TVSLPLS(ph)SPNIK ddPTM_A459_MK2206_30min_R1 1 TVSLPLSSPNIK 12 0 A0A0A0MQZ8;Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;H0Y7Y3 A0A0A0MQZ8;Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 TVSLPLS(0.937)S(0.063)PNIK 228.93 6.98E-10 52171000 10485 9862.3 9555.8 8245.4 8353.1 8149.5 8830.6 9168.7 8124.3 7635.6 TRUE FALSE 9593.195691 9220.262477 8907.17892 8880.462137 8020.378339 8610.917647 8241.526786 9088.539023 8968.850058 8581.555774 1.117885375 1.074427845 1.037944535 1.034831256 0.934606562 1.003421509 0.960376767 1.059078244 1.045131011 1 13.06702351 -5.196627397 1.350118535 1.002518174 1.124920461 0.531838792 0.035094728 0.574979975 1.522702993 0.011510432 0.078383813 6.36E-06 5.196627397 0.122402286 TVSLPLS(ph)SPNIK ddPTM_A459_MK2206_30min_R2 1 TVSLPLSSPNIK 12 0 A0A0A0MQZ8;Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;H0Y7Y3 A0A0A0MQZ8;Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 TVSLPLS(0.5)S(0.5)PNIK 113.38 0.0059815 38592000 94576 97641 91913 101240 112710 92494 106690 77484 76295 107670 TRUE FALSE 101816.8113 92792.28992 94977.33355 92968.36815 108284.4391 96013.92398 92681.47484 87611.42484 82931.00119 104156.7367 0.977534574 0.89089091 0.911869328 0.892581422 1.03962972 0.921821545 0.889826983 0.841149863 0.796213512 1 16.66839663 -7.334719396 3.302150499 0.864982329 0.938501176 0.152825287 0.063763852 0.406709697 8.680348976 0.028596948 0.018649745 4.63E-08 7.334719396 0.073518847 TVSLPLSS(ph)PNIK ddPTM_A459_MK2206_30min_R1 1 TVSLPLSSPNIK 12 0 A0A0A0MQZ8;Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;H0Y7Y3 A0A0A0MQZ8;Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 TVSLPLS(0.192)S(0.808)PNIK 243.3 1.22E-13 70780000 10387 9496.9 9242.5 7325 7396.3 7493.2 8942.7 8710.6 7997 7948.3 TRUE FALSE 9503.531106 8878.650084 8615.144851 7889.172769 7101.689709 7917.458509 8346.1488 8634.444143 8828.316768 8932.995411 1.063868352 0.993916338 0.964418368 0.883149762 0.794995338 0.886316196 0.93430573 0.966578818 0.988281798 1 13.12492831 -5.119358674 1.829061765 0.915782738 1.064186469 0.36403928 0.057551703 0.535135296 2.863021359 0.017942175 0.108302218 7.60E-06 5.119358674 0.148403731 TVSLPLSS(ph)PNIK ddPTM_A459_MK2206_30min_R2 1 TVSLPLSSPNIK 12 0 A0A0A0MQZ8;Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;H0Y7Y3 A0A0A0MQZ8;Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 TVSLPLS(0.381)S(0.619)PNIK 240.18 2.48E-13 45327000 163080 170670 154340 152810 188680 145710 206550 128920 143660 169990 TRUE FALSE 175565.5302 162194.776 159485.6186 140324.9342 181271.4752 151255.0962 179429.7369 145770.2866 156155.2871 164443.2402 1.067636042 0.986326806 0.96985208 0.853333551 1.102334611 0.919801239 1.091134769 0.886447424 0.949599916 1 17.32723018 -4.761990771 3.295193634 0.970673879 1.083370146 0.126674049 0.075235614 0.733595366 12.03744257 0.018255719 0.218612757 1.73E-05 4.761990771 0.112696267 TVSLSTRS(ph)SR ddPTM_A459_MK2206_30min_R1 1 TVSLSTRSSR 10 1 M0QX37 M0QX37 MAP1S 1 TVS(0.156)LS(0.156)T(0.024)RS(0.444)S(0.219)R 92.866 0.014312 10361000 1203.9 1409.9 1288 992 1306.4 1213.9 1413.2 1035.7 985.06 952.24 TRUE FALSE 1101.501983 1318.115254 1200.574149 1068.404012 1254.363322 1282.629969 1318.928007 1026.644984 1087.460512 1070.21068 1.029238451 1.231640908 1.121811033 0.998311857 1.172071392 1.198483619 1.23240034 0.959292411 1.016118165 1 10.06367912 -7.775989867 24.99937976 0.990778915 1.141315067 0.454455471 0.074685685 231.0309857 396931.6731 0.041854653 0.020245138 1.67E-08 7.775989867 0.150536152 TVSLTPS(ph)PTTQVETPDLVDHDNT(ph)SPLFR ddPTM_A459_MK2206_30min_R2 1 TVSLTPSPTTQVETPDLVDHDNTSPLFR 28 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 T(0.003)VS(0.028)LT(0.301)PS(0.374)PT(0.155)T(0.171)QVET(0.085)PDLVDHDNT(0.465)S(0.418)PLFR 58.435 0.037385 0 4472.7 4000.1 4585.3 4770.7 3715.8 3707.7 3830.8 2402.4 3862.1 4005.3 TRUE FALSE 4815.133351 3801.460851 4738.171613 4380.918549 3569.899022 3848.799122 3327.811358 2716.401929 4198.018477 3874.607389 1.242740972 0.981121561 1.222877865 1.130674184 0.921357615 0.993339127 0.858877049 0.701077982 1.083469383 1 11.91983442 -6.265381913 4.935558335 0.910058137 1.13983372 0.456470316 0.115787097 0.166122446 12.42714229 0.035189964 0.042707164 5.43E-07 6.265381913 0.229775583 TVSLTPSPT(ph)TQVETPDLVDHDNTS(ph)PLFR ddPTM_A459_MK2206_30min_R2 1 TVSLTPSPTTQVETPDLVDHDNTSPLFR 28 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 TVSLT(0.006)PS(0.118)PT(0.665)T(0.211)QVET(0.003)PDLVDHDNT(0.268)S(0.729)PLFR 99.048 2.71E-06 4004200 33991 37894 37409 35914 34129 32158 34358 31206 30796 33033 TRUE FALSE 36593.37709 36012.23906 38656.19739 32979.71132 32788.92398 33381.79522 29846.75333 35284.73135 33474.58041 31955.13592 1.145148535 1.126962475 1.209702174 1.032062934 1.026092459 1.044645697 0.934020541 1.10419594 1.047549305 1 14.9637602 -5.777830962 24.81904563 1.0281106 1.157240186 0.65295941 0.044629925 131.2081921 198666.3784 0.012579044 0.018721822 1.67E-06 5.777830962 0.129129586 TVSLTPSPT(ph)TQVETPDLVDHDNTSPLFR ddPTM_A459_MK2206_30min_R1 2 TVSLTPSPTTQVETPDLVDHDNTSPLFR 28 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 TVSLTPS(0.004)PT(0.498)T(0.498)QVET(0.001)PDLVDHDNTSPLFR;TVSLT(0.002)PS(0.027)PT(0.485)T(0.485)QVET(0.002)PDLVDHDNTSPLFR 153.25 1.65E-14 161938000 15471.8 11762 11459.7 9091.9 22855.9 19369.9 17352.9 12073.4 10121.3 10634.8 TRUE FALSE 14155.84216 10996.29166 10681.84749 9792.159713 21945.5011 20466.607 16195.3197 11967.84354 11173.44535 11952.31931 1.184359436 0.92001321 0.893704997 0.819268584 1.836087251 1.712354436 1.354993895 1.001298846 0.93483491 1 13.54500298 -6.174359808 24.99999879 1.329442156 0.947553192 0.256840443 0.291905037 112.4999542 32295.48107 0.095094112 0.122766583 6.69E-07 6.174359808 -0.381888964 TVSLTPSPT(ph)TQVETPDLVDHDNTSPLFR ddPTM_A459_MK2206_30min_R2 2 TVSLTPSPTTQVETPDLVDHDNTSPLFR 28 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 TVSLTPS(0.004)PT(0.857)T(0.139)QVETPDLVDHDNTSPLFR;TVSLT(0.001)PS(0.016)PT(0.491)T(0.491)QVET(0.001)PDLVDHDNTSPLFR 161.46 2.08E-17 49480000 155542 198738 157741 212465 169446 180117 226040 170138 170433 200719 TRUE FALSE 167450.4151 188868.9599 163000.0062 195105.9299 162792.6986 186971.4786 196360.6765 192375.6208 185256.9543 194169.5555 0.862392741 0.972701202 0.839472521 1.004822457 0.838404858 0.962928911 1.011284576 0.990760989 0.954098874 1 17.56695749 -6.986624522 24.98845866 0.988100564 0.90858555 0.379127656 0.052009963 244.4128427 456617.4382 0.01689843 0.014895447 1.03E-07 6.986624522 -0.079515014 TVSLTPSPTT(ph)QVETPDLVDHDNT(ph)SPLFR ddPTM_A459_MK2206_30min_R2 1 TVSLTPSPTTQVETPDLVDHDNTSPLFR 28 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 T(0.002)VS(0.005)LT(0.051)PS(0.202)PT(0.245)T(0.269)QVET(0.238)PDLVDHDNT(0.561)S(0.426)PLFR 55.49 0.032187 2882400 5350.5 6000.5 5047.2 6485.9 6822.2 4648.5 4822.5 4030.2 4294.7 6734.3 TRUE FALSE 5760.138394 5702.523896 5215.471129 5955.981223 6554.326149 4825.401925 4189.299957 4556.960978 4668.245243 6514.560343 0.884194495 0.875350537 0.800586817 0.91425682 1.006104143 0.740710297 0.643067181 0.699503994 0.716586385 1 12.6694521 -6.857091547 9.938838911 0.733147207 0.890530853 0.292558417 0.101504768 0.357705032 34.17411773 0.034729721 0.030637675 1.39E-07 6.857091547 0.157383646 TVSLTPSPTTQVET(ph)PDLVDHDNTSPLFR ddPTM_A459_MK2206_30min_R2 2 TVSLTPSPTTQVETPDLVDHDNTSPLFR 28 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 TVSLTPSPT(0.006)T(0.022)QVET(0.884)PDLVDHDNT(0.051)S(0.036)PLFR;TVSLTPS(0.003)PT(0.014)T(0.014)QVET(0.92)PDLVDHDNT(0.024)S(0.024)PLFR 97.623 1.42E-06 38858000 46499.8 61221.7 49907.6 73450 51321.2 78346.7 55457 48244.2 57355.9 47326.3 TRUE FALSE 50059.86044 58181.5194 51571.49447 67448.90005 49306.07182 81328.23857 48175.42928 54549.88259 62344.61251 45782.04671 1.093438674 1.270837011 1.126456727 1.473260916 1.076973953 1.776422078 1.052277754 1.191512536 1.361769886 1 15.48249434 -10.70817543 3.607014208 0.999711218 1.271664399 0.126794969 0.211860809 72192762.78 106652898.3 249987.8504 0.050230593 1.96E-11 10.70817543 0.271953181 TVSLTPSPTTQVETPDLVDHDNT(ph)SPLFR ddPTM_A459_MK2206_30min_R2 3 TVSLTPSPTTQVETPDLVDHDNTSPLFR 28 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 TVSLTPSPT(0.001)T(0.004)QVET(0.201)PDLVDHDNT(0.397)S(0.397)PLFR;TVSLTPSPTTQVET(0.001)PDLVDHDNT(0.5)S(0.5)PLFR;TVSLTPS(0.001)PT(0.003)T(0.003)QVET(0.035)PDLVDHDNT(0.665)S(0.294)PLFR 98.636 1.22E-06 35610500 123489.5 165415 118189 149398 127797.7 130089.2 136015.5 110965.9 123536.3 128495.1 TRUE FALSE 132943.9511 157200.7316 122129.3623 137191.7055 122779.7202 135039.8357 118156.5015 125469.5241 134281.2641 124302.3154 1.069521116 1.264664549 0.982518804 1.103693886 0.98775087 1.086382303 0.950557526 1.00939008 1.080279668 1 16.92349364 -5.275402914 24.99940108 1.026410501 1.167092842 0.436319478 0.06455513 591.572218 1059111.839 0.015708816 0.032950625 5.30E-06 5.275402914 0.140682341 TVSPGS(ph)VS(ph)PIHGQGQVVENLK ddPTM_A459_MK2206_30min_R2 1 TVSPGSVSPIHGQGQVVENLK 21 0 A0A087WVF7;Q9NZM3-2;Q9NZM3;Q9NZM3-4;Q9NZM3-3 A0A087WVF7 ITSN2 Intersectin-2 2 T(0.077)VS(0.343)PGS(0.83)VS(0.75)PIHGQGQVVENLK 66.772 0.03608 40328000 45947 51785 50326 60593 50202 50827 59650 43772 42834 57128 TRUE FALSE 49464.73765 49213.4322 52003.84372 55642.35807 48230.81724 52761.2571 51817.88335 49493.15069 46559.62389 55263.91804 0.895063893 0.890516524 0.94100899 1.006847868 0.872736117 0.954714377 0.937644039 0.895578027 0.842495891 1 15.75405023 -5.251611234 23.33402856 0.929307013 0.892790196 0.089985264 0.048730361 744.5384832 1767659.548 0.012472531 0.032056652 5.60E-06 5.251611234 -0.036516817 TVSPGSVS(ph)PIHGQGQVVENLK ddPTM_A459_MK2206_30min_R1 3 TVSPGSVSPIHGQGQVVENLK 21 0 A0A087WVF7;Q9NZM3-2;Q9NZM3;Q9NZM3-4;Q9NZM3-3 A0A087WVF7 ITSN2 Intersectin-2 1 TVSPGS(0.021)VS(0.979)PIHGQGQVVENLK;TVSPGS(0.023)VS(0.977)PIHGQGQVVENLK;T(0.007)VS(0.009)PGS(0.186)VS(0.798)PIHGQGQVVENLK 142.14 8.98E-06 183696000 12044.8 10210.6 10867.1 10204.4 11555.8 10635.2 12168.1 10726.9 10142.9 9187.8 TRUE FALSE 11020.32651 9545.888084 10129.47153 10990.34466 11095.50802 11237.35583 11356.38825 10633.11584 11197.29075 10326.05403 1.067235023 0.924446847 0.980962476 1.064331508 1.074515782 1.088252667 1.099780053 1.029736608 1.084372668 1 13.33400143 -5.767936105 10.32730351 1.067333264 0.984198246 0.368473845 0.04273663 0.136843776 180.8240197 0.011366632 0.017786692 1.71E-06 5.767936105 -0.083135018 TVSPGSVS(ph)PIHGQGQVVENLK ddPTM_A459_MK2206_30min_R2 6 TVSPGSVSPIHGQGQVVENLK 21 0 A0A087WVF7;Q9NZM3-2;Q9NZM3;Q9NZM3-4;Q9NZM3-3 A0A087WVF7 ITSN2 Intersectin-2 1 T(0.007)VS(0.02)PGS(0.288)VS(0.685)PIHGQGQVVENLK;T(0.007)VS(0.155)PGS(0.155)VS(0.683)PIHGQGQVVENLK;T(0.007)VS(0.007)PGS(0.145)VS(0.841)PIHGQGQVVENLK;T(0.049)VS(0.274)PGS(0.138)VS(0.539)PIHGQGQVVENLK;T(0.001)VS(0.004)PGS(0.024)VS(0.971)PIHGQGQVVENLK;TVS(0.002)PGS(0.026)VS(0.972)PIHGQGQVVENLK 115.56 5.10E-05 461934000 332117 432511 385160 501817 486941 443537 464409 388719 413477 368165 TRUE FALSE 357544.1329 411033.1327 398001.0422 460816.9459 467821.2497 460416.1113 403431.5404 439525.908 449440.4821 356151.8062 1.003909363 1.15409532 1.117503927 1.293877885 1.31354451 1.292752426 1.132751634 1.234097091 1.261935147 1 18.44213278 -4.772416423 1.26810137 1.226559593 0.913073799 0.296437302 0.093165887 1.686404754 2.310139038 0.027342406 0.699480642 1.69E-05 4.772416423 -0.313485795 TVSQQS(ph)FDGVSLDSSGPEDR ddPTM_A459_MK2206_30min_R1 2 TVSQQSFDGVSLDSSGPEDR 20 0 H7C1J4;Q6BDS2 H7C1J4 UHRF1BP1 UHRF1-binding protein 1 1 TVSQQS(0.927)FDGVS(0.018)LDS(0.042)S(0.013)GPEDR;TVS(0.002)QQS(0.998)FDGVSLDSSGPEDR 266.28 5.96E-49 10319600 2768.7 2496.9 2480.34 2066.17 2406.7 2216.06 2617.88 2332.78 2223.61 1933.67 TRUE FALSE 2533.207526 2334.351356 2311.981431 2225.306771 2310.836043 2341.531402 2443.246002 2312.38475 2454.762217 2173.227638 1.165642973 1.074140286 1.063846875 1.023963957 1.06331983 1.077444149 1.124247621 1.06403246 1.129546751 1 11.08562358 -7.017809897 23.54039918 1.087086045 1.073772836 0 0.04735854 2265.846441 2994912.34 0.017609853 0.013950649 9.60E-08 7.017809897 -0.01331321 TVSQQS(ph)FDGVSLDSSGPEDR ddPTM_A459_MK2206_30min_R2 2 TVSQQSFDGVSLDSSGPEDR 20 0 H7C1J4;Q6BDS2 H7C1J4 UHRF1BP1 UHRF1-binding protein 1 1 TVSQQS(0.997)FDGVS(0.003)LDSSGPEDR;TVS(0.009)QQS(0.988)FDGVS(0.003)LDSSGPEDR 204.5 3.46E-16 8037500 15333.1 20196.6 16285.7 21737.3 18287.3 22522.5 22725 17811.7 19269.2 20157 TRUE FALSE 16507.01393 19193.66621 16828.65711 19961.29306 17569.24872 23379.60952 19741.1802 20139.75035 20945.20019 19499.27874 0.846544846 0.984326983 0.863039979 1.023693918 0.90102044 1.198998682 1.012405662 1.032845913 1.07415256 1 14.25113314 -6.722074444 24.99990421 1.062529089 0.929274324 0.493779686 0.070737378 136.6456087 86780.56251 0.022178707 0.022178385 1.90E-07 6.722074444 -0.133254765 TVSS(ph)PIPYTPSPS(ph)SSRPISPGLSYASHTVGFTPPTSLTR ddPTM_A459_MK2206_30min_R2 1 TVSSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTR 39 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 2 T(0.03)VS(0.097)S(0.343)PIPY(0.155)T(0.176)PS(0.204)PS(0.277)S(0.289)S(0.111)RPIS(0.233)PGLS(0.022)Y(0.035)AS(0.025)HT(0.003)VGFT(0.001)PPTSLTR 53.879 0.00018763 28664000 13288 29198 16405 28620 35061 21942 31596 20611 24379 22459 TRUE FALSE 14305.3395 27748.06978 16951.93451 26281.65445 33684.32897 22777.01819 27447.40725 23304.92847 26499.44135 21726.16467 0.658438326 1.277172948 0.780254351 1.209677587 1.550403833 1.04836811 1.263334218 1.072666475 1.219701763 1 14.4071459 -4.753364783 24.9994263 1.16217008 0.658437406 0.375711429 0.193099137 329.4684323 1019973.576 0.048070676 0.522311446 1.76E-05 4.753364783 -0.503732674 TVSS(ph)PIPYTPSPSSSR ddPTM_A459_MK2206_30min_R1 2 TVSSPIPYTPSPSSSR 16 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 T(0.001)VS(0.068)S(0.931)PIPYTPSPSSSR;T(0.212)VS(0.39)S(0.397)PIPYT(0.001)PSPSSSR 261.17 3.76E-39 26996800 3538.1 3285.4 3768.8 2832.6 3171.3 3397.2 4290.8 2630.9 4111.7 4449.9 TRUE FALSE 3237.166016 3071.519863 3512.984356 3050.767343 3044.980406 3589.546528 4004.568561 2607.898319 4539.125929 5001.187207 0.647279512 0.614158146 0.702430085 0.610008627 0.608851515 0.717738885 0.800723587 0.521455849 0.907609682 1 12.28805489 -8.430957333 5.128491919 0.997755836 0.658166418 0.740781966 0.072057155 0.097888027 3.81689195 0.068421433 0.017801493 3.71E-09 8.430957333 -0.339589418 TVSS(ph)PIPYTPSPSSSR ddPTM_A459_MK2206_30min_R2 3 TVSSPIPYTPSPSSSR 16 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 TVS(0.007)S(0.818)PIPYT(0.063)PS(0.018)PS(0.004)S(0.059)S(0.03)R;TVS(0.043)S(0.908)PIPY(0.004)T(0.008)PS(0.012)PS(0.008)S(0.008)S(0.008)R;T(0.027)VS(0.166)S(0.746)PIPY(0.006)T(0.044)PS(0.006)PS(0.002)S(0.002)SR 143.64 0.00039128 57948000 89477 67875 84099 87376 67107 65218 82880 75699 53742 86505 TRUE FALSE 96327.42792 64504.4262 86902.81869 80237.1013 64472.04199 67699.91669 71997.75644 85593.11921 58416.38202 83682.34893 1.151108079 0.770824756 1.038484457 0.958829458 0.770437766 0.809010712 0.860369688 1.022833612 0.698072924 1 16.35263573 -4.745871531 24.76459407 0.882704877 1.15110891 0.337950208 0.113400257 921.0820981 1465123.045 0.027409088 0.657502043 1.80E-05 4.745871531 0.268404033 TVSS(ph)PIPYTPSPSSSRPISPGLSY(ph)ASHTVGFTPPTSLTR ddPTM_A459_MK2206_30min_R1 1 TVSSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTR 39 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 2 T(0.255)VS(0.145)S(0.467)PIPY(0.129)T(0.106)PS(0.095)PS(0.087)S(0.14)S(0.133)RPIS(0.109)PGLS(0.089)Y(0.214)AS(0.028)HT(0.001)VGFTPPTSLTR 56.36 0.00050462 49370000 2420.7 1667.1 2295.7 1546.2 3035.8 2405 2690.6 1966 1429.1 1187.8 TRUE FALSE 2214.806753 1558.571487 2139.87428 1665.288592 2914.877658 2541.169022 2511.114983 1948.811469 1577.660059 1334.953631 1.659088901 1.16750983 1.602957758 1.247450513 2.183504797 1.903563511 1.881050341 1.459834577 1.181808882 1 10.38257392 -8.246461217 2.542508556 1.029384735 1.655187208 0.389537908 0.284953725 0.323692873 3.814164401 0.28327397 0.082178003 5.67E-09 8.246461217 0.625802473 TVSS(ph)PPT(ph)SPRPGSAATVSASTSNIIPPR ddPTM_A459_MK2206_30min_R1 5 TVSSPPTSPRPGSAATVSASTSNIIPPR 28 1 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 2 T(0.026)VS(0.167)S(0.652)PPT(0.812)S(0.317)PRPGS(0.004)AAT(0.002)VS(0.004)AS(0.003)T(0.009)S(0.004)NIIPPR;T(0.007)VS(0.04)S(0.637)PPT(0.658)S(0.658)PRPGSAATVSASTSNIIPPR;T(0.008)VS(0.056)S(0.855)PPT(0.54)S(0.539)PRPGSAATVSAST(0.001)SNIIPPR;T(0.104)VS(0.257)S(0.668)PPT(0.704)S(0.224)PRPGS(0.016)AAT(0.007)VS(0.003)AS(0.003)T(0.006)S(0.007)NIIPPR;T(0.011)VS(0.082)S(0.829)PPT(0.543)S(0.535)PRPGSAATVSASTSNIIPPR 115.2 1.43E-11 296666800 39427.7 37292 35873.3 28966.5 37731.4 32108.7 36210.2 33724.8 29881.6 28921.5 TRUE FALSE 36074.16707 34864.28402 33438.32034 31197.50485 36228.47844 33926.66685 33794.68363 33429.94763 32987.89925 32504.51377 1.109820234 1.072598233 1.02872852 0.959789926 1.114567617 1.04375248 1.039692022 1.028470934 1.014871334 1 14.98835245 TVSS(ph)PPT(ph)SPRPGSAATVSASTSNIIPPR ddPTM_A459_MK2206_30min_R2 3 TVSSPPTSPRPGSAATVSASTSNIIPPR 28 1 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 2 T(0.003)VS(0.062)S(0.838)PPT(0.548)S(0.548)PRPGS(0.001)AATVSASTSNIIPPR;T(0.016)VS(0.208)S(0.733)PPT(0.522)S(0.522)PRPGSAATVSASTSNIIPPR;T(0.065)VS(0.2)S(0.764)PPT(0.488)S(0.455)PRPGS(0.009)AAT(0.001)VS(0.002)AS(0.001)T(0.008)S(0.008)NIIPPR 84.125 0.00012686 187745000 343094 464702 352013 435276 385238 344877 355448 300863 354567 402256 TRUE FALSE 369361.5404 441625.5744 363748.9377 399712.5584 370111.6205 358001.5359 308777.2506 340186.8271 385406.5967 389130.4197 0.949197292 1.134903755 0.934773843 1.027194324 0.951124872 0.920003983 0.793505815 0.874223165 0.990430399 1 18.56989424 -6.509103126 2.321815259 0.899722259 1.015953616 0.25482238 0.074798936 0.361053615 3.900145259 0.02641845 0.028643312 3.10E-07 6.509103126 0.116231357 TVSS(ph)PPTSPR ddPTM_A459_MK2206_30min_R2 1 TVSSPPTSPR 10 0 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 1 TVS(0.041)S(0.943)PPT(0.016)S(0.001)PR 111.27 0.008954 21818000 220500 197360 201370 232190 194190 185590 256770 193690 144290 233910 TRUE FALSE 237381.6495 187559.3894 208083.5753 213219.3343 186565.1249 192652.7575 223055.7906 219005.948 156840.0834 226277.5359 1.049072983 0.828890896 0.91959449 0.942291215 0.824496891 0.851400281 0.985761975 0.967864296 0.69313148 1 17.78773384 -4.746632585 24.73772515 0.891615745 1.049073457 0.222332654 0.089010089 1092.503284 1825129.318 0.021352516 0.468004722 1.79E-05 4.746632585 0.157457711 TVSS(ph)SNGGESSSR ddPTM_A459_MK2206_30min_R2 1 TVSSSNGGESSSR 13 0 Q8WW12;Q8WW12-2 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 1 TVS(0.079)S(0.615)S(0.016)NGGES(0.287)S(0.003)SR 134.4 0.0015672 0 5456.7 4721.4 5998.3 6395.9 5269.1 4311.5 4995.1 6640.6 5628.1 6716.4 TRUE FALSE 5874.469147 4486.942142 6198.280328 5873.334511 5062.208659 4475.577154 4339.23737 7508.549221 6117.621965 6497.244418 0.904147785 0.690591557 0.953986018 0.903973151 0.779131634 0.688842356 0.667858109 1.15565134 0.941571776 1 12.66561226 -7.763237335 24.99999745 1.036458665 0.799312176 0.506292325 0.10588644 40.75683059 566677.7611 0.056364897 0.029269165 1.72E-08 7.763237335 -0.237146489 TVSSDGCS(ph)TPSR ddPTM_A459_MK2206_30min_R2 1 TVSSDGCSTPSR 12 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 TVSSDGCS(0.495)T(0.495)PS(0.01)R 130.69 0.0021322 6767900 38332 24603 25137 35040 21098 24075 30688 26472 16401 31418 TRUE FALSE 41266.72739 23381.2508 25975.05503 32177.11991 20269.58651 24991.191 26658.62874 29931.98129 17827.52933 30392.83323 1.357778233 0.769301454 0.854644081 1.058707481 0.66691994 0.822272501 0.877135361 0.984836822 0.586570169 1 14.89144355 -4.756058267 24.9994002 0.847677476 1.357779034 0.546447107 0.139679415 127.4478635 592029.6448 0.033087108 0.277251138 1.75E-05 4.756058267 0.510101559 TVSSDGCS(ph)TPSREEGGCSLASTPATTLHLLQLSGQR ddPTM_A459_MK2206_30min_R2 1 TVSSDGCSTPSREEGGCSLASTPATTLHLLQLSGQR 36 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 T(0.063)VS(0.054)S(0.2)DGCS(0.222)T(0.222)PS(0.222)REEGGCS(0.007)LAS(0.01)T(0.001)PATTLHLLQLSGQR 91.555 5.95E-10 22529000 8554.5 7803.4 8411.2 10474 11824 10267 11128 6411.1 9454.7 9242.7 TRUE FALSE 9209.439097 7415.894503 8691.62521 9618.240695 11359.73035 10657.71788 9666.880233 7249.052783 10277.05272 8941.111456 1.030010547 0.829415285 0.97209673 1.07573211 1.270505396 1.191990272 1.081172098 0.81075522 1.149415569 1 13.12623847 -5.683593832 4.007076208 1.087590676 0.924540882 0.212347294 0.123733551 0.34075116 10.47913765 0.037062224 0.065907515 2.07E-06 5.683593832 -0.163049794 TVSSDGCST(ph)PSR ddPTM_A459_MK2206_30min_R1 1 TVSSDGCSTPSR 12 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 TVSSDGCS(0.027)T(0.972)PS(0.001)R 152.96 0.0011268 2718400 1931.4 1872.2 1662.1 1332.3 1761 1313.2 1847.5 1306.9 2070.4 2549 TRUE FALSE 1767.124288 1750.31944 1549.281283 1434.913977 1690.855641 1387.552249 1724.256646 1295.473911 2285.625489 2864.789364 0.616842659 0.610976661 0.540801115 0.5008794 0.590219882 0.48434704 0.601879031 0.452205641 0.797833697 1 11.48421335 -8.495498586 3.920561639 0.998726634 0.551827975 0.877432074 0.054725963 0.056271376 2.143822227 0.051362665 0.013482464 3.20E-09 8.495498586 -0.446898659 TVSSDGCST(ph)PSR ddPTM_A459_MK2206_30min_R2 2 TVSSDGCSTPSR 12 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 TVSSDGCS(0.022)T(0.978)PS(0.001)R;TVSSDGCS(0.026)T(0.973)PS(0.001)R 112.5 0.014855 10406800 67908 52764 56189 66139 42201 49023 53418 45538 35273 55821 TRUE FALSE 73107.08869 50143.81649 58062.31322 60735.23213 40543.9767 50888.60462 46404.15243 51489.97296 38340.98178 53999.56534 1.353845873 0.928596669 1.075236677 1.124735574 0.750820427 0.942389152 0.859343073 0.953525693 0.710023896 1 15.72066017 -1.522878745 0.513281578 0.877325259 14.99224462 0.511264216 0.123855638 96.03041427 0.982956975 0.06471232 1470.996069 0.03 1.522878745 14.11491936 TVSSDGCSTPSREEGGCSLAS(ph)TPATTLHLLQLSGQR ddPTM_A459_MK2206_30min_R2 1 TVSSDGCSTPSREEGGCSLASTPATTLHLLQLSGQR 36 1 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 T(0.028)VS(0.026)S(0.085)DGCS(0.12)T(0.12)PS(0.12)REEGGCS(0.091)LAS(0.356)T(0.055)PAT(0.001)TLHLLQLSGQR 62.447 6.49E-05 27116000 7794.8 22861 17524 26915 27588 20156 21876 18986 19638 11059 TRUE FALSE 8391.575881 21725.75598 18108.24141 24715.9584 26504.7565 20923.0507 19003.65492 21467.53539 21346.07774 10698.14574 0.784395361 2.030796413 1.69265234 2.31030302 2.477509389 1.955764225 1.77635035 2.006659464 1.995306315 1 13.38507314 -4.759573656 24.99268571 1.967352039 0.784393867 0.440870914 0.378427478 42.28740481 566314.1985 0.090122433 0.567132084 1.74E-05 4.759573656 -1.182958171 TVSSPIPYT(ph)PS(ph)PSSSRPISPGLSYASHTVGFTPPTSLTR ddPTM_A459_MK2206_30min_R1 1 TVSSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTR 39 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 2 T(0.001)VS(0.001)S(0.004)PIPY(0.317)T(0.358)PS(0.243)PS(0.243)S(0.317)S(0.317)RPIS(0.134)PGLS(0.03)Y(0.027)AS(0.005)HT(0.003)VGFT(0.001)PPTSLTR 54.31 0.00034629 9071100 538.8 460.2 456 369.7 731.47 731.58 618.89 610.34 468.21 315.17 TRUE FALSE 492.9722306 430.2408964 425.0479905 398.1743581 702.334001 773.0014274 577.6049773 605.0038617 516.882105 354.215639 1.391729151 1.214629872 1.199969577 1.124101576 1.982786539 2.18229051 1.630659163 1.708010023 1.459230051 1 8.4684841 -6.249891272 24.96532523 1.720494431 1.22899212 0.313177178 0.302685374 797.6739239 1724454.383 0.0895284 0.114577124 5.62E-07 6.249891272 -0.491502311 TVSSPIPYT(ph)PSPS(ph)SSRPISPGLSYASHTVGFTPPTSLTR ddPTM_A459_MK2206_30min_R2 1 TVSSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTR 39 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 2 T(0.001)VS(0.002)S(0.004)PIPY(0.32)T(0.357)PS(0.325)PS(0.378)S(0.401)S(0.094)RPIS(0.094)PGLS(0.014)Y(0.007)AS(0.001)HTVGFTPPTSLTR 53.622 0.00078536 9249300 23053 26051 24461 30746 27686 28337 26978 20378 19317 21869 TRUE FALSE 24817.9554 24757.34522 25276.51753 28233.95345 26598.90853 29415.38439 23435.75619 23041.47457 20997.15774 21155.41632 1.173125361 1.170260365 1.194801234 1.334596919 1.257309623 1.390442237 1.107789884 1.0891525 0.992519241 1 14.36873946 -7.480686148 5.192061937 1.041020996 1.251601143 0.684268769 0.06989514 0.130323039 8.60230958 0.033520025 0.021410268 3.31E-08 7.480686148 0.210580146 TVSSPIPYTPS(ph)PSSSR ddPTM_A459_MK2206_30min_R1 1 TVSSPIPYTPSPSSSR 16 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 TVS(0.001)S(0.001)PIPYT(0.187)PS(0.645)PS(0.012)S(0.1)S(0.055)R 101.2 0.0082759 0 855.66 725.98 1006.6 783.25 585.5 668.71 801.75 655.52 736.06 663.37 TRUE FALSE 782.8816238 678.71857 938.2747965 843.5760507 562.1782952 706.5717823 748.2667204 649.7888578 812.576071 745.5532838 1.050067971 0.91035555 1.25849462 1.131476541 0.75404174 0.947714667 1.003639494 0.871552539 1.08989671 1 9.542167654 -6.18420947 24.99996339 0.941162734 1.087145502 0.269106375 0.115475214 167.2757512 54147.44893 0.034572634 0.044633102 6.54E-07 6.18420947 0.145982768 TVSSPIPYTPSPSSSRPIS(ph)PGLSYASHTVGFTPPTSLTR ddPTM_A459_MK2206_30min_R2 2 TVSSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTR 39 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 TVSSPIPYTPSPS(0.002)S(0.043)S(0.043)RPIS(0.448)PGLS(0.243)Y(0.21)AS(0.01)HT(0.001)VGFT(0.001)PPTSLTR;TVSSPIPY(0.012)T(0.032)PS(0.029)PS(0.026)S(0.068)S(0.068)RPIS(0.515)PGLS(0.105)Y(0.094)AS(0.039)HT(0.008)VGFT(0.002)PPT(0.001)S(0.001)LT(0.001)R 74.465 3.87E-07 70448000 47042 91111 80474 101986 106136 116219 85824 66332 74482 61715 TRUE FALSE 50643.57169 86586.56023 83156.96299 93653.41756 101968.5673 120641.7955 74555.20571 75001.82015 80960.30973 59701.2446 0.848283349 1.450330907 1.392884915 1.568701259 1.707980596 2.020758466 1.248804882 1.256285705 1.35609082 1 15.86547339 -8.436459075 1.110130448 1.026484233 1.486877043 0.174112061 0.290074857 0.883217272 2.370147787 0.291315969 0.094369419 3.66E-09 8.436459075 0.460392809 TVSSPIPYTPSPSSSRPISPGLS(ph)YASHTVGFTPPTSLTR ddPTM_A459_MK2206_30min_R1 3 TVSSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTR 39 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 T(0.014)VS(0.089)S(0.219)PIPY(0.013)T(0.005)PS(0.005)PS(0.002)S(0.011)S(0.011)RPIS(0.011)PGLS(0.302)Y(0.259)AS(0.058)HTVGFTPPTSLTR;TVSSPIPY(0.001)T(0.001)PS(0.002)PS(0.007)S(0.202)S(0.202)RPIS(0.202)PGLS(0.277)Y(0.094)AS(0.013)HT(0.001)VGFTPPTSLTR;TVSSPIPY(0.001)T(0.001)PS(0.004)PS(0.015)S(0.053)S(0.053)RPIS(0.175)PGLS(0.516)Y(0.154)AS(0.017)HT(0.006)VGFT(0.002)PPTSLT(0.001)R 80.486 1.49E-07 264036000 6447.9 3824.74 4685.51 3093.87 6789.1 5496.4 5508.3 4489.57 3396.96 2650.86 TRUE FALSE 5899.472246 3575.748731 4367.470636 3332.160403 6518.675771 5807.601418 5140.851357 4450.318163 3750.086148 2979.26855 1.980174713 1.200210277 1.465953996 1.118449159 2.188012145 1.949338007 1.725541445 1.493762005 1.258727129 1 11.54074246 -8.365465673 1.991335581 1.012839632 1.644128779 0.313352766 0.319550192 0.419939476 3.321154197 0.321686075 0.091835416 4.31E-09 8.365465673 0.631289147 TVSSPIPYTPSPSSSRPISPGLS(ph)YASHTVGFTPPTSLTR ddPTM_A459_MK2206_30min_R2 1 TVSSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTR 39 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 T(0.002)VS(0.004)S(0.011)PIPY(0.006)T(0.006)PS(0.006)PS(0.006)S(0.081)S(0.081)RPIS(0.081)PGLS(0.351)Y(0.329)AS(0.025)HT(0.007)VGFT(0.001)PPTSLTR 45.47 0.0043368 4689900 3640.7 5110.4 3463.9 6263.2 5008 4942.4 4388.6 2070.9 3585.4 3437 TRUE FALSE 3919.434791 4856.624967 3579.384697 5751.476525 4811.360757 5130.486495 3812.371548 2341.57374 3897.251611 3324.850971 1.178830217 1.460704558 1.076554928 1.729844909 1.447090651 1.543072619 1.146629302 0.704264269 1.172158285 1 11.69907396 -7.495955653 5.836177408 0.946618612 1.406711146 0.50522282 0.200369861 0.139187244 15.32237247 0.086941314 0.055190039 3.19E-08 7.495955653 0.460092534 TVSSPPT(ph)S(ph)PRPGSAATVSASTSNIIPPR ddPTM_A459_MK2206_30min_R2 2 TVSSPPTSPRPGSAATVSASTSNIIPPR 28 1 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 2 T(0.062)VS(0.089)S(0.393)PPT(0.529)S(0.758)PRPGS(0.01)AAT(0.012)VS(0.037)AS(0.026)T(0.063)S(0.021)NIIPPR;T(0.002)VS(0.032)S(0.107)PPT(0.93)S(0.93)PRPGSAATVSASTSNIIPPR 93.21 1.89E-05 128983800 322368 351242 339241 392119 379647 394772 385737 294192 339951 392065 TRUE FALSE 347048.7419 333799.833 350551.1256 360081.6234 364740.1512 409795.3251 335089.2685 332643.9045 369519.3235 379271.9512 0.915039303 0.880106826 0.924273795 0.949402196 0.961685013 1.080478859 0.883506591 0.877059069 0.974285924 1 18.53287316 -5.626253115 2.718314055 0.958106167 0.897725158 0.181803263 0.0546249 0.521289743 7.73106215 0.016702432 0.033481196 2.36E-06 5.626253115 -0.060381008 TVSSPPT(ph)SPRPGSAATVSASTSNIIPPR ddPTM_A459_MK2206_30min_R1 2 TVSSPPTSPRPGSAATVSASTSNIIPPR 28 1 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 1 T(0.067)VS(0.075)S(0.266)PPT(0.295)S(0.295)PRPGSAATVSAST(0.001)S(0.001)NIIPPR;T(0.019)VS(0.021)S(0.076)PPT(0.713)S(0.166)PRPGSAAT(0.003)VSAST(0.001)SNIIPPR 81.726 7.65E-05 212574000 2164.15 2295.1 2333.2 2360.3 2775.5 2981.5 3064.9 2418.1 2345.9 2066.23 TRUE FALSE 1980.077678 2145.688573 2174.828885 2542.090715 2664.945958 3150.309953 2860.446113 2396.958807 2589.7647 2322.210172 0.852669454 0.92398552 0.936534045 1.094685893 1.147590339 1.356599843 1.231777446 1.032188574 1.115215467 1 11.18128283 -5.790518609 2.183918071 1.162838934 0.890057792 0.566752989 0.09531024 0.230560528 2.245018617 0.030986063 0.057583633 1.62E-06 5.790518609 -0.272781142 TVSSPPT(ph)SPRPGSAATVSASTSNIIPPR ddPTM_A459_MK2206_30min_R2 1 TVSSPPTSPRPGSAATVSASTSNIIPPR 28 1 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 1 T(0.003)VS(0.019)S(0.046)PPT(0.462)S(0.462)PRPGS(0.003)AAT(0.001)VSAS(0.001)T(0.001)S(0.001)NIIPPR 52.465 0.022779 86241000 7044.1 13005 8000.5 13996 11209 13750 13796 9526.7 11443 12543 TRUE FALSE 7583.401712 12359.19061 8267.232677 12852.48203 10768.87834 14273.26589 11984.56863 10771.8724 12438.29146 12133.72294 0.624985567 1.018581904 0.681343452 1.059236485 0.88751642 1.176330295 0.987707457 0.887763175 1.025100995 1 13.56673465 -5.771976165 24.99802041 1.000428421 0.799331454 0.413154015 0.123693844 212.4725884 504081.2878 0.033155849 0.049768527 1.69E-06 5.771976165 -0.201096967 TVSTS(ph)SQPEENVDR ddPTM_A459_MK2206_30min_R2 1 TVSTSSQPEENVDR 14 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 T(0.007)VS(0.025)T(0.001)S(0.484)S(0.484)QPEENVDR 220.46 7.69E-09 12917000 39409 35801 28354 37404 29700 29174 28920 30435 32787 33785 TRUE FALSE 42426.18334 34023.1744 29299.30821 34347.97355 28533.82877 30284.23701 25122.76926 34412.959 35638.75399 32682.59822 1.298127617 1.041018042 0.896480384 1.050956026 0.873058763 0.926616569 0.768689475 1.052944407 1.090450452 1 14.99623506 -4.79314537 2.890089121 0.951855521 1.353840534 0.550072613 0.092425475 0.301826775 3.621283302 0.02446773 0.285257279 1.61E-05 4.79314537 0.401985013 TVSTSS(ph)QPEENVDR ddPTM_A459_MK2206_30min_R2 1 TVSTSSQPEENVDR 14 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 TVSTS(0.022)S(0.978)QPEENVDR 274.38 8.82E-45 12484000 49855 50770 42614 37747 44293 39833 45064 27786 31832 39788 TRUE FALSE 53671.93713 48248.83563 44034.72949 34662.94935 42553.83427 41348.87273 39147.04267 31417.7256 34600.68982 38489.72082 1.394448595 1.253551198 1.144064663 0.900576793 1.10558958 1.074283519 1.017077854 0.816262756 0.898959231 1 15.23218559 -1.522878745 0.40288514 0.930426753 9.030764373 0.742532093 0.084124255 38.7709901 0.511909301 0.064877787 249.848827 0.03 1.522878745 8.10033762 TVT(ph)NAVVTVPAYFNDSQR ddPTM_A459_MK2206_30min_R1 1 TVTNAVVTVPAYFNDSQR 18 0 P11142;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PI65 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 T(0.014)VT(0.863)NAVVT(0.123)VPAYFNDSQR 137.52 0.0006363 0 721.8 724.6 749.24 485.28 726.11 868.17 770.68 677.67 681.64 522.56 TRUE FALSE 660.4071197 677.4284083 698.3836763 522.6563497 697.1875011 917.3250351 719.2693434 671.7452026 752.4989173 587.2986779 1.124482558 1.153464896 1.189145664 0.889932788 1.187108923 1.561939554 1.224707922 1.143788038 1.281288287 1 9.19795058 -6.519407818 24.99172628 1.264039752 1.093170613 0.178086617 0.151624182 230.0278759 1656286.589 0.049730998 0.050728441 3.02E-07 6.519407818 -0.170869139 TVT(ph)NAVVTVPAYFNDSQR ddPTM_A459_MK2206_30min_R2 1 TVTNAVVTVPAYFNDSQR 18 0 P11142;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PI65 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 T(0.027)VT(0.973)NAVVTVPAYFNDSQR 99.508 0.0097486 0 7473.8 6688.3 5936 7436.1 8041.5 7606.7 7339.7 7044 5396.5 5510.9 TRUE FALSE 8045.999874 6356.168748 6133.903277 6828.546843 7725.750305 7896.178299 6375.988573 7964.674986 5865.877815 5331.079784 1.509262701 1.192285429 1.150593037 1.280893762 1.449190524 1.481159281 1.196003217 1.494007839 1.100317019 1 12.38021206 -10.41569044 7.745352881 0.999999999 1.317802103 0.292490924 0.147940654 2.01E-09 2.71E-10 0.140747432 0.034136266 3.84E-11 10.41569044 0.317802104 TVTAMDVVYALK ddPTM_A459_MK2206_30min_R1 2 TVTAMDVVYALK 12 0 P62805 P62805 HIST1H4A Histone H4 0 ; 218.49 5.84E-07 24153000 6188.3 5802.8 4928.9 5064.4 5384.9 7338.1 5230.8 7076.4 5813.2 8078.5 FALSE TRUE 5661.952589 5425.036665 4594.340001 5454.460966 5170.40803 7753.576881 4881.862876 7014.531781 6417.502943 9079.32557 0.62360938 0.59751538 0.506022167 0.600756182 0.569470495 0.853981589 0.537690034 0.772582911 0.706825952 1 13.14836942 -10.23594915 0.214521917 1.245796052 0.530578381 0.632097739 0.090141841 9.174125246 0.5096666 1.627253912 0.229351107 5.81E-11 10.23594915 -0.715217671 TVTAMDVVYALKR ddPTM_A459_MK2206_30min_R1 1 TVTAMDVVYALKR 13 1 P62805 P62805 HIST1H4A Histone H4 0 134.18 0.0016879 5095000 1860.9 1681.5 2241 2676.1 2257.5 2062.6 1766.7 2142.7 1292 1360.6 FALSE TRUE 1702.620683 1572.034044 2088.887164 2882.213686 2167.578995 2179.38263 1648.846667 2123.9666 1426.308023 1529.1614 1.113434254 1.028036703 1.366034458 1.88483288 1.417495233 1.425214258 1.078268564 1.388974767 0.932738705 1 10.57852497 -8.104849019 1.242907403 0.966421295 1.367178936 0.254317339 0.237004781 0.703301365 2.008147181 0.240125433 0.079971447 7.86E-09 8.104849019 0.400757641 TVTCVTVVEPEAPPS(ph)PDVLQAATHR ddPTM_A459_MK2206_30min_R1 4 TVTCVTVVEPEAPPSPDVLQAATHR 25 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR 256.78 2.56E-62 592068000 13152.5 13320.7 13450.9 11467.6 14637.1 12884 13730.7 12353.3 11502.7 10324.4 TRUE FALSE 12033.81081 12453.52001 12537.89038 12350.83654 14054.07331 13613.48095 12814.75006 12245.2964 12698.44683 11603.46462 1.037087732 1.073258757 1.080529893 1.064409377 1.211196291 1.173225532 1.10438998 1.055313805 1.094366833 1 13.50226802 -6.101937785 19.74465051 1.11472803 1.065626191 0.112260677 0.055713356 14.14330044 2727.509518 0.017164692 0.022159658 7.91E-07 6.101937785 -0.049101838 TVTCVTVVEPEAPPS(ph)PDVLQAATHR ddPTM_A459_MK2206_30min_R2 4 TVTCVTVVEPEAPPSPDVLQAATHR 25 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(0.996)PDVLQAAT(0.004)HR;TVTCVTVVEPEAPPS(1)PDVLQAATHR 199.31 3.17E-31 399037000 114826 141730 126997 152716 162297 140227 149154 121737 125940 130459 TRUE FALSE 123617.1668 134691.8943 131231.0166 140238.6143 155924.4043 145563.4367 129569.9006 137648.4439 136894.0336 126202.1335 0.979517251 1.067271135 1.039847845 1.111222215 1.23551322 1.153415023 1.026685501 1.090698232 1.084720438 1 16.94537677 -4.819125838 1.26868977 1.104863725 0.939258182 0.220469978 0.063536882 2.06317509 3.024241048 0.020403467 0.441443952 1.52E-05 4.819125838 -0.165605543 TVTESRPLS(ph)VPVK ddPTM_A459_MK2206_30min_R2 1 TVTESRPLSVPVK 13 1 Q7Z7G8-2;Q7Z7G8-6;Q7Z7G8;Q7Z7G8-3 Q7Z7G8-2 VPS13B Vacuolar protein sorting-associated protein 13B 1 T(0.001)VT(0.108)ES(0.108)RPLS(0.783)VPVK 65.477 0.041684 10662000 49025 65233 64883 66301 61104 59321 78416 64279 63739 72167 TRUE FALSE 52778.39169 61993.62408 67046.16684 60883.99621 58704.74994 61578.50222 68119.88501 72680.486 69282.90301 69812.1967 0.756005314 0.888005635 0.960378988 0.872111165 0.840895326 0.88205937 0.975759083 1.041085791 0.992418321 1 16.09119149 -7.329326623 3.164999367 1.012092794 0.869769985 0.654019311 0.048840681 0.174207796 3.438443576 0.023319367 0.015197596 4.68E-08 7.329326623 -0.142322809 TVTLELLDNGAGADAT(ph)K ddPTM_A459_MK2206_30min_R1 2 TVTLELLDNGAGADATK 17 0 A8K7I4 A8K7I4 CLCA1 Calcium-activated chloride channel regulator 1 1 TVTLELLDNGAGADAT(1)K;TVTLELLDNGAGADAT(1)K 170.74 1.90E-06 228440000 7008.4 6429.4 6868.2 5956 7060.8 6925.6 7363.2 6640.9 5800.3 5366 TRUE FALSE 6412.298777 6010.844891 6402.00572 6414.732152 6779.553385 7317.721487 6872.014363 6582.839311 6403.261942 6030.780591 1.063261825 0.996694342 1.061555071 1.063665317 1.12415852 1.21339541 1.139490031 1.091540177 1.061763373 1 12.55812903 -5.994547908 2.491617485 1.116173687 1.03505838 0.20556472 0.054909431 0.384034402 4.7991636 0.017506958 0.026730268 1.01E-06 5.994547908 -0.081115307 TVTLELLDNGAGADAT(ph)K ddPTM_A459_MK2206_30min_R2 1 TVTLELLDNGAGADATK 17 0 A8K7I4 A8K7I4 CLCA1 Calcium-activated chloride channel regulator 1 1 TVTLELLDNGAGADAT(1)K 180.27 1.83E-07 10930000 68974 81558 79180 88882 90442 85926 87170 64929 82528 78918 TRUE FALSE 74254.70247 77507.94832 81819.82168 81620.05628 86890.79265 89195.97414 75724.47429 73415.44323 89706.13626 76342.91212 0.972646974 1.015260568 1.071740904 1.069124219 1.138164503 1.168359598 0.991899211 0.961653691 1.175042106 1 16.2202066 -5.042066507 2.230129555 1.07404861 0.968964289 0.180172205 0.069382482 0.702285652 5.837536041 0.019512065 0.117639136 9.08E-06 5.042066507 -0.105084321 TVTNAVVT(ph)VPAYFNDSQR ddPTM_A459_MK2206_30min_R2 1 TVTNAVVTVPAYFNDSQR 18 0 P11142;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PI65 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 T(0.004)VT(0.377)NAVVT(0.415)VPAYFNDS(0.205)QR 133.94 0.00095991 2563800 7495.1 9321.4 6412 10274 8023.8 8278.4 9505.3 8042.4 7193.6 6961.3 TRUE FALSE 8068.930619 8858.512831 6625.77288 9434.581335 7708.745296 8593.440313 8257.242692 9093.569294 7819.286325 6734.153351 1.198210109 1.315460514 0.98390585 1.401004825 1.144723753 1.276098102 1.226173843 1.350365639 1.161138738 1 12.71728086 -8.537789857 22.39268017 0.999999993 1.235834355 0.299962631 0.110289717 739.6457609 1110760.272 0.098843644 0.025521319 2.90E-09 8.537789857 0.235834362 TVTNAVVTVPAYFNDSQR ddPTM_A459_MK2206_30min_R2 1 TVTNAVVTVPAYFNDSQR 18 0 P11142;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PI65 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 192.32 5.33E-20 0 12466 17897 15259 16025 16685 14981 18480 16487 14437 15469 FALSE TRUE 13420.40654 17008.261 15767.72744 14715.70624 16029.86306 15551.11245 16053.5538 18641.90751 15692.70416 14964.2478 0.896831349 1.136593114 1.053693287 0.983390975 1.071210747 1.039217785 1.072793903 1.245763086 1.048679785 1 13.86923214 -7.52799419 24.99798625 1.120188551 1.037487974 0.101504668 0.083224507 250.5599031 1224399.743 0.036820581 0.021354947 2.96E-08 7.52799419 -0.082700578 TVTPASS(ph)AKTS(ph)PAK ddPTM_A459_MK2206_30min_R2 1 TVTPASSAKTSPAK 14 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 2 TVTPAS(0.038)S(0.962)AKT(0.052)S(0.948)PAK 135.55 0.020694 3185700 27081 27200 26507 20234 21701 15663 28393 21490 21229 31433 TRUE FALSE 29154.34218 25849.28755 27390.73015 18580.81747 20848.9097 16259.06644 24664.96499 24298.81679 23075.46005 30407.34378 0.958792797 0.850100151 0.900793254 0.611063485 0.685653763 0.534708541 0.811151581 0.799110141 0.758877862 1 14.89213218 -5.733765691 24.61620602 0.72634668 0.897916089 0.262281653 0.120872969 233.3832207 207596.061 0.032558897 0.056376021 1.85E-06 5.733765691 0.171569409 TVVLT(ph)PTYSGEADALLPSLR ddPTM_A459_MK2206_30min_R1 1 TVVLTPTYSGEADALLPSLR 20 0 Q96Q42-3;Q96Q42 Q96Q42-3 ALS2 Alsin 1 T(0.031)VVLT(0.954)PT(0.015)YSGEADALLPSLR 159.4 2.57E-06 5485900 1671.8 1886.1 1697.8 1631 1816.5 1870.6 1858.6 1672.5 1588.6 1150.4 TRUE FALSE 1529.604631 1763.314547 1582.558066 1756.619903 1744.144958 1976.511755 1734.616185 1657.877509 1753.740655 1292.920237 1.183061868 1.363823147 1.224018328 1.358645222 1.348996565 1.528719018 1.341626603 1.282273617 1.356418288 1 10.33641756 -10.61043294 4.170114958 0.999953429 1.335613249 0.559977642 0.088223975 10199543.84 5190341.898 4576.206212 0.021868789 2.45E-11 10.61043294 0.33565982 TVVLT(ph)PTYSGEADALLPSLR ddPTM_A459_MK2206_30min_R2 1 TVVLTPTYSGEADALLPSLR 20 0 Q96Q42-3;Q96Q42 Q96Q42-3 ALS2 Alsin 1 T(0.012)VVLT(0.769)PT(0.182)Y(0.003)S(0.034)GEADALLPSLR 100.07 0.0018267 2331900 12815 16622 14422 13490 16573 19712 16802 10658 13244 12389 TRUE FALSE 13796.12625 15796.57565 14902.82228 12387.82385 15922.26075 20462.15397 14595.87722 12051.03719 14395.93918 11984.74794 1.151140292 1.31805656 1.243482329 1.033632406 1.328543647 1.707349547 1.217871021 1.005531134 1.201188314 1 13.54891195 -10.00304372 7.438308116 1.000000002 1.24926033 0.137069882 0.184315207 0 0 0.191935891 0.046551291 9.93E-11 10.00304372 0.249260328 TVYS(ph)ALGLR ddPTM_A459_MK2206_30min_R1 1 TVYSALGLR 9 0 A0A140T9Z5;H7C2J4;A0A0G2JK88;A0A140T982;A0A140T9J3;A0A0G2JIC1;A0A0G2JK42;A0A0G2JHB4;A0A0G2JJ70;A0A140T927;A0A140T9I9;A2ABE9;A0A024RCV8;O43196-4;O43196;O43196-2;O43196-3 A0A140T9Z5 MSH5 MutS protein homolog 5 1 TVY(0.406)S(0.593)ALGLR 88.948 0.020188 2915400 3845.9 3998.2 4265.5 3656.5 3985.4 4011.6 4274.6 3926.8 2880.5 3312.9 TRUE FALSE 3518.786009 3737.916453 3975.969744 3938.124264 3826.653079 4238.733325 3989.449233 3892.468402 3179.938283 3723.327063 0.945064978 1.003918375 1.067854013 1.057689587 1.027750991 1.138426266 1.071474293 1.045427473 0.854058273 1 11.86237664 -8.233323101 22.62212285 0.927029222 1.04799776 0.402044618 0.057289482 186.0640159 149706.2992 0.03930977 0.01484557 5.84E-09 8.233323101 0.120968538 TWGGPGT(ph)PPT(ph)PS(ph)GT(ph)GRR ddPTM_A459_MK2206_30min_R1 1 TWGGPGTPPTPSGTGRR 17 1 B1AHR3;Q6ICB4 B1AHR3 FAM109B Sesquipedalian-2 4 TWGGPGT(1)PPT(1)PS(1)GT(1)GRR 58.09 0.031626 5305900 254.72 0 0 136.54 236.55 277.8 157.13 139.86 133.09 105.89 TRUE FALSE 233.0547264 0 0 147.0563345 227.1277126 293.5287959 146.6481444 138.6372188 146.9251818 119.0084526 1.95830398 0 0 1.235679746 1.908500679 2.466453344 1.232249821 1.164935899 1.2345777 1 6.894920235 -5.964600718 9.004478648 1.546863269 0.59014391 0.252646022 0.647022971 0.377885207 88.92503036 0.188273733 0.278730614 1.08E-06 5.964600718 -0.95671936 TWS(ph)PTACGGKK ddPTM_A459_MK2206_30min_R2 1 TWSPTACGGKK 11 1 Q15464;Q15464-2 Q15464 SHB SH2 domain-containing adapter protein B 1 T(0.009)WS(0.987)PT(0.003)ACGGKK 61.532 0.047727 12376000 25079 44382 42788 43658 51549 50960 50010 30271 56038 43816 TRUE FALSE 26999.06752 42178.05442 44214.53056 40091.00174 49524.92725 52899.31851 43443.62693 34227.52364 60912.08395 42386.28751 0.636976464 0.995087253 1.04313289 0.945848389 1.168418613 1.248029059 1.024945318 0.807514072 1.437070513 1 15.37130999 -4.398843407 1.366322531 1.085980748 2.46E-12 0.403437298 0.163072386 3.324254497 2.783070597 0.045981152 6.433455251 3.99E-05 4.398843407 -1.085980748 TWSAPYDGERPS(ph)PEPSPFGSR ddPTM_A459_MK2206_30min_R1 1 TWSAPYDGERPSPEPSPFGSR 21 1 Q8N612;Q8N612-2;E9PJK5;Q8N612-3 Q8N612 FAM160A2 FTS and Hook-interacting protein 1 TWS(0.001)APY(0.016)DGERPS(0.975)PEPS(0.007)PFGS(0.001)R 67.655 0.0045902 8620000 1595.5 1391.2 1398.7 1019.2 1602.1 1515.4 1719.5 1650.5 1550 1277.4 TRUE FALSE 1459.794347 1300.632627 1303.760141 1097.698961 1538.284964 1601.200638 1604.795292 1636.069853 1711.128047 1435.653956 1.016814909 0.905951341 0.908129801 0.764598569 1.071487289 1.115310992 1.117814837 1.139599028 1.191880564 1 10.48749233 -6.439422717 6.517689369 1.11908707 0.900483975 0.666573906 0.072170052 0.14354615 9.32099297 0.022525794 0.025458237 3.64E-07 6.439422717 -0.218603095 TWSAPYDGERPS(ph)PEPSPFGSR ddPTM_A459_MK2206_30min_R2 2 TWSAPYDGERPSPEPSPFGSR 21 1 Q8N612;Q8N612-2;E9PJK5;Q8N612-3 Q8N612 FAM160A2 FTS and Hook-interacting protein 1 TWSAPYDGERPS(0.99)PEPS(0.005)PFGS(0.005)R;T(0.001)WS(0.002)APY(0.04)DGERPS(0.94)PEPS(0.014)PFGS(0.004)R 57.414 0.015166 13588600 21811.8 34795 29274 33303 32429 39878 25433 26122.3 29471 30006 TRUE FALSE 23481.72818 33067.1309 30249.98055 30582.03837 31155.67452 41395.58523 22093.61655 29536.5743 32034.33431 29026.90668 0.808964194 1.139188935 1.042135867 1.053575522 1.073337744 1.426110805 0.761142646 1.017558455 1.103608272 1 14.82510322 -4.751875706 24.90091476 1.069494867 0.80896365 0.203812166 0.153889787 615.105425 1601430.074 0.038008133 0.478445265 1.77E-05 4.751875706 -0.260531217 TWTTPEVT(ph)SPPPSPR ddPTM_A459_MK2206_30min_R2 2 TWTTPEVTSPPPSPR 15 0 Q5T1S5;Q7Z6M1-2;Q7Z6M1 Q5T1S5 RABEPK Rab9 effector protein with kelch motifs 1 TWTT(0.001)PEVT(0.655)S(0.343)PPPS(0.001)PR;TWT(0.003)T(0.012)PEVT(0.614)S(0.371)PPPS(0.001)PR 138.05 0.00093352 10892100 30778 38893 32960 41306 34541 33235 39797 29063 33413 29049 TRUE FALSE 33134.38734 36961.63018 34058.86995 37931.16767 33184.74679 34499.78121 34571.6061 32861.63389 36319.20234 28101.13351 1.179112128 1.315307447 1.212010538 1.349809169 1.180904207 1.227700698 1.23025664 1.169405991 1.292446169 1 14.7783407 -13.42928755 0.316823171 2.15E-18 1.251273714 0.594975187 0.058807507 95.44811278 1.64830182 62.74513801 0.05059143 3.72E-14 13.42928755 1.251273714 TWTTPEVTS(ph)PPPSPR ddPTM_A459_MK2206_30min_R1 2 TWTTPEVTSPPPSPR 15 0 Q5T1S5;Q7Z6M1-2;Q7Z6M1 Q5T1S5 RABEPK Rab9 effector protein with kelch motifs 1 TWTTPEVT(0.209)S(0.79)PPPS(0.001)PR;TWTT(0.001)PEVT(0.231)S(0.768)PPPSPR 172.43 3.91E-05 19932000 4762.1 4416.3 4626.2 3728 5173 4260.2 4118.1 4407.7 3547.4 3673 TRUE FALSE 4357.058388 4128.798067 4312.186433 4015.131206 4966.948456 4501.408842 3843.389063 4369.163944 3916.164924 4128.03897 1.055478987 1.000183888 1.044608945 0.972648571 1.203222279 1.090447274 0.931044763 1.058411506 0.948674408 1 12.01124087 -7.246675554 24.60680579 0.989400289 1.060019705 0.245861054 0.065455203 1093.395239 1822360.382 0.026014684 0.020056016 5.67E-08 7.246675554 0.070619416 TWTTPEVTS(ph)PPPSPR ddPTM_A459_MK2206_30min_R2 1 TWTTPEVTSPPPSPR 15 0 Q5T1S5;Q7Z6M1-2;Q7Z6M1 Q5T1S5 RABEPK Rab9 effector protein with kelch motifs 1 TWTT(0.002)PEVT(0.231)S(0.767)PPPSPR 146.27 0.00034664 5746700 15844 25095 21858 23521 23301 23083 23441 19737 24043 23158 TRUE FALSE 17057.02882 23848.81879 22586.73481 21599.25906 22386.08566 23961.43974 20363.16854 22316.69367 26134.21668 22402.35636 0.761394406 1.064567424 1.008230315 0.964151213 0.999273706 1.069594616 0.908974405 0.996176175 1.166583384 1 14.45136287 -4.754551037 24.98531551 1.014970446 0.761393969 0.581289813 0.065663592 174.7464918 633782.1605 0.016161767 0.156673843 1.76E-05 4.754551037 -0.253576477 TWTTPEVTSPPPS(ph)PR ddPTM_A459_MK2206_30min_R2 1 TWTTPEVTSPPPSPR 15 0 Q5T1S5;Q7Z6M1-2;Q7Z6M1 Q5T1S5 RABEPK Rab9 effector protein with kelch motifs 1 TWT(0.002)T(0.008)PEVT(0.271)S(0.119)PPPS(0.601)PR 80.834 0.02843 6898100 19140 22513 17774 22292 22428 21400 25637 18434 28273 16898 TRUE FALSE 20605.37312 21395.03716 18366.57629 20470.67229 21547.36403 22214.392 22270.8311 20843.38709 30732.13443 16346.61964 1.260528083 1.308835565 1.123570297 1.252287796 1.31815412 1.358959374 1.362412021 1.275088523 1.880029945 1 13.99670471 -6.733877375 1.275797848 1.408786527 1.233130012 0.085711403 0.206818974 1.001605002 3.428353665 0.095845741 0.0886618 1.85E-07 6.733877375 -0.175656515 TYAGGTAS(ph)ATK ddPTM_A459_MK2206_30min_R2 1 TYAGGTASATK 11 0 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;H0YA91;H0Y944;P20810-5;F8W7E0;E9PSG1;D6RGF7;D6RBR1;E7EN75 P20810-6;P20810-5 CAST Calpastatin 1 T(0.025)YAGGT(0.026)AS(0.949)AT(0.001)K 92.856 0.025035 0 18664 14039 17308 14315 15801 11609 14393 11853 13725 13830 TRUE FALSE 20092.93019 13341.84367 17885.04008 13145.41871 15180.57335 12050.78863 12503.18181 13402.2278 14918.77569 13378.72823 1.501856517 0.997243045 1.336826623 0.982561158 1.13467985 0.900742464 0.934556827 1.001756487 1.115111648 1 13.70765336 -1.522878746 0.620898558 1.005430338 31.68732025 0.52625045 0.124881025 152.6172386 1.097502028 0.052731277 6390.313249 0.03 1.522878746 30.68188992 TYGGDT(ph)GSPEISFTK ddPTM_A459_MK2206_30min_R1 2 TYGGDTGSPEISFTK 15 0 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915 H0Y9X0 FRYL Protein furry homolog-like 1 T(0.014)YGGDT(0.685)GS(0.301)PEISFTK;T(0.04)YGGDT(0.947)GS(0.013)PEISFTK 172.09 9.68E-05 16056000 5991.2 5834.7 6317 5011.2 5471 6163.8 6170.8 5354.5 5232.8 5541 TRUE FALSE 5481.616979 5454.859969 5888.21964 5397.163492 5253.078485 6512.789029 5759.157191 5307.686171 5776.768286 6227.460912 0.880233061 0.875936444 0.945524946 0.866671597 0.843534557 1.045817729 0.924800215 0.85230341 0.927628189 1 12.60442835 TYGGDT(ph)GSPEISFTK ddPTM_A459_MK2206_30min_R2 1 TYGGDTGSPEISFTK 15 0 H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915 H0Y9X0 FRYL Protein furry homolog-like 1 T(0.35)Y(0.253)GGDT(0.361)GS(0.033)PEIS(0.002)FT(0.001)K 88.73 0.040519 3436300 22819 25108 22879 29004 27946 25873 30735 23591 22170 24900 TRUE FALSE 24566.04018 23861.17323 23641.77444 26634.28042 26848.69962 26857.61515 26699.45758 26674.4247 24098.30653 24087.51504 1.019866107 0.990603356 0.981494953 1.105729685 1.114631359 1.115001489 1.108435533 1.107396286 1.000448012 1 14.55599795 -5.760269386 24.99911513 1.087516328 0.996649646 0.417639352 0.04324401 26.32172918 562385.6611 0.011754905 0.018998362 1.74E-06 5.760269386 -0.090866682 TYLEEELDKWAK ddPTM_A459_MK2206_30min_R1 1 TYLEEELDKWAK 12 1 Q16719;B8ZZA3;A0A087X297;Q16719-2;A0A087WYM2 Q16719 KYNU Kynureninase 0 116.74 0.013916 5277400 2564.2 2719.7 2716.1 2639.6 2736 2124 2640 2376.6 1807.6 1732.9 FALSE TRUE 2346.101325 2542.647036 2531.738699 2842.902449 2627.019326 2244.259044 2463.890417 2355.821637 1995.506489 1947.584735 1.204620925 1.305538594 1.299937638 1.459706681 1.348860093 1.152329346 1.265100498 1.209611882 1.024605735 1 10.92747038 -8.063370278 0.926640108 0.986615237 1.314638795 0.668566759 0.07741291 0.342502702 0.570032392 0.076742267 0.028804422 8.64E-09 8.063370278 0.328023558 TYQVPPVQPAS(ph)PGSHNALK ddPTM_A459_MK2206_30min_R2 1 TYQVPPVQPASPGSHNALK 19 0 A2RRE0;Q9Y4E6-2;Q9Y4E6;K7EPQ4 A2RRE0 WDR7 WD repeat-containing protein 7 1 TYQVPPVQPAS(0.999)PGS(0.001)HNALK 123.32 0.00027375 5184600 24888 32042 24062 33815 25938 21947 30966 22380 23302 26954 TRUE FALSE 26793.44442 30450.84087 24864.21507 31052.20633 24919.54379 22782.20846 26900.127 25305.14284 25328.76584 26074.49319 1.02757297 1.167840182 0.95358383 1.190903543 0.955705778 0.873735428 1.031664424 0.97049414 0.971400121 1 14.67035159 -6.306469512 24.95190705 0.964244644 1.081509032 0.385789211 0.072713926 434.3271124 240666.37 0.021388543 0.024252504 4.94E-07 6.306469512 0.117264388 TYS(ph)APAINAIQGGSFESPK ddPTM_A459_MK2206_30min_R1 1 TYSAPAINAIQGGSFESPK 19 0 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 T(0.017)YS(0.983)APAINAIQGGSFESPK 219.61 3.32E-19 10362000 6755 6818.7 5515.2 4430.5 4274.5 4285.6 5143.4 4279.6 5537.1 6374.1 TRUE FALSE 6180.451778 6374.801391 5140.84359 4771.737878 4104.237614 4528.246968 4800.293171 4242.183908 6112.70136 7163.77163 0.86273713 0.88986664 0.7176169 0.666092964 0.572915752 0.632103758 0.670079034 0.592171851 0.853279763 1 12.80650363 -10.71896619 21.31449317 1 0.70915995 0.375182115 0.108927194 0 0 0.114919447 0.02787206 1.91E-11 10.71896619 -0.29084005 TYS(ph)APAINAIQGGSFESPK ddPTM_A459_MK2206_30min_R2 2 TYSAPAINAIQGGSFESPK 19 0 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 T(0.18)YS(0.82)APAINAIQGGSFESPK;T(0.228)Y(0.001)S(0.768)APAINAIQGGS(0.002)FESPK 116.09 0.00046962 6369700 45412 35807 32189 34535 31893 27801 34906 28428 23418.4 37748 TRUE FALSE 48888.77764 34028.87645 33262.16519 31713.38003 30640.72057 28858.98654 30322.80027 32143.63721 25455.2901 36516.28585 1.3388212 0.931882191 0.910885771 0.868472225 0.839097402 0.790304541 0.830391141 0.880254836 0.697094173 1 15.15625241 -2.123478895 1.082394002 0.836220351 200 0.792738358 0.074261936 252.0991565 1.001624799 0.021320039 123778.7951 0.007525253 2.123478895 199.1637796 TYS(ph)APAINAIQGGSFESPKK ddPTM_A459_MK2206_30min_R1 1 TYSAPAINAIQGGSFESPKK 20 1 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 T(0.207)Y(0.002)S(0.791)APAINAIQGGSFESPKK 146.75 1.20E-05 22285000 2004.2 1900.1 1609.6 1378.8 1291.1 1303.8 1246.7 1528 1303.1 1128.3 TRUE FALSE 1833.732266 1776.403145 1500.344837 1484.995415 1239.672753 1377.620029 1163.534918 1514.640857 1438.561908 1268.082322 1.44606721 1.400857904 1.183160439 1.171056002 0.977596431 1.086380596 0.917554718 1.194434171 1.134438895 1 10.30843269 -5.368308358 1.381390216 1.059263569 1.477964627 0.764526761 0.078939194 0.267778135 0.857656502 0.025127643 0.115218844 4.28E-06 5.368308358 0.418701058 TYS(ph)DEANQMR ddPTM_A459_MK2206_30min_R1 1 TYSDEANQMR 10 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 T(0.116)YS(0.884)DEANQMR 187.78 0.00018648 15329000 3303.7 3007.5 3214 2499.1 3154.8 3129.6 3186.2 2967.4 2913.9 2506.1 TRUE FALSE 3022.702967 2811.711203 2995.842635 2691.581115 3029.137636 3306.795247 2973.654412 2941.456335 3216.810332 2816.574588 1.073184065 0.998273298 1.063647541 0.955622168 1.075468638 1.174048527 1.055769808 1.044338164 1.142100176 1 11.45972596 -6.498608997 24.5769541 1.08879973 1.022824545 0.215136752 0.05512079 860.120851 871009.0773 0.016553791 0.018667026 3.17E-07 6.498608997 -0.065975186 TYS(ph)DEANQMR ddPTM_A459_MK2206_30min_R2 1 TYSDEANQMR 10 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 T(0.229)YS(0.771)DEANQMR 115.92 0.0064967 23671000 23668 26181 24946 23759 19138 18768 20015 26332 19977 20522 TRUE FALSE 25480.04028 24880.88961 25777.68719 21817.8137 18386.54596 19482.22939 17387.00646 29773.68281 21714.56335 19852.36882 1.283476068 1.253295757 1.298469086 1.099003041 0.926163831 0.981355402 0.875815204 1.499754668 1.093802132 1 14.27702354 -5.810141421 5.701890327 1.069724174 1.276115915 0.265869558 0.160585826 0.285474999 20.77695236 0.048576247 0.074443524 1.55E-06 5.810141421 0.206391741 TYS(ph)DTDSCSDIPLEDPDRPVHCSK ddPTM_A459_MK2206_30min_R2 2 TYSDTDSCSDIPLEDPDRPVHCSK 24 1 Q9HB20 Q9HB20 PLEKHA3 Pleckstrin homology domain-containing family A member 3 1 T(0.183)YS(0.813)DT(0.003)DSCSDIPLEDPDRPVHCSK;T(0.35)Y(0.001)S(0.648)DT(0.001)DSCSDIPLEDPDRPVHCSK 132.39 5.80E-08 12564500 53368 84748 60851 108256 92025 107055 103254 70075 79695 70212 TRUE FALSE 57453.89511 80539.53756 62879.74197 99411.13851 88411.63611 111129.053 89696.62577 79234.0431 86626.72704 67920.98819 0.845893098 1.185782771 0.925777785 1.463629154 1.301683595 1.636151888 1.320602485 1.166561989 1.275404398 1 16.05156983 -5.755626954 24.99952191 1.329879192 1.005814326 0.405722259 0.177595831 139.2908502 599088.5903 0.04815063 0.080601146 1.76E-06 5.755626954 -0.324064866 TYS(ph)FEQPWPNAR ddPTM_A459_MK2206_30min_R1 2 TYSFEQPWPNAR 12 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 T(0.15)YS(0.85)FEQPWPNAR;T(0.206)YS(0.794)FEQPWPNAR 165.51 0.00050849 16187000 2250.8 2166.57 2160.18 2453.56 2734.71 4365.03 4931.44 5045.05 5799.45 5377.45 TRUE FALSE 2059.357641 2025.525899 2013.553 2642.533616 2625.78071 4612.174226 4602.472636 5000.94166 6402.323581 6043.649104 0.340747387 0.335149487 0.333168416 0.437241403 0.434469418 0.763143946 0.761538692 0.827470552 1.059347337 1 12.56120418 -7.045022271 0.732124495 1.017242675 0.310350808 0.948634084 0.061207979 0.137982892 0.153343712 0.047694633 0.036183891 9.02E-08 7.045022271 -0.706891866 down TYS(ph)FEQPWPNAR ddPTM_A459_MK2206_30min_R2 1 TYSFEQPWPNAR 12 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 T(0.077)YS(0.923)FEQPWPNAR 86.699 0.029531 3470800 9165.9 13307 10042 12762 12858 14379 19419 17498 15118 17559 TRUE FALSE 9867.648351 12646.19373 10376.79527 11719.30378 12353.13031 14926.20292 16869.26197 19785.04868 16432.93631 16986.05127 0.580926561 0.744504625 0.610900974 0.689936913 0.727251444 0.878732949 0.9931244 1.164782113 0.967437108 1 14.05206289 -6.933788231 1.593810139 1.053605025 0.658698349 0.878410092 0.063921778 0.115239615 0.598624883 0.02892012 0.022866569 1.16E-07 6.933788231 -0.394906676 TYS(ph)LGSALRPSTSR ddPTM_A459_MK2206_30min_R1 2 TYSLGSALRPSTSR 14 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 TYS(0.997)LGSALRPS(0.002)TSR;T(0.009)YS(0.984)LGS(0.007)ALRPSTSR 104.41 0.029457 141179000 3153.67 3302.36 3060.3 2912.09 3668.88 3500.93 3539.48 3603.18 3642.15 3115.27 TRUE FALSE 2885.433806 3087.375764 2852.575362 3136.379676 3522.740741 3699.149631 3303.367747 3571.677777 4020.764526 3501.213167 0.824124002 0.881801712 0.814739128 0.895797978 1.006148604 1.05653368 0.943492324 1.02012577 1.14839181 1 11.77363919 -6.196376607 2.720718216 1.029865422 0.844687532 0.743555708 0.051199248 0.14723823 2.144448696 0.01663063 0.021897417 6.36E-07 6.196376607 -0.18517789 TYS(ph)LGSALRPSTSR ddPTM_A459_MK2206_30min_R2 2 TYSLGSALRPSTSR 14 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 T(0.16)YS(0.837)LGS(0.003)ALRPS(0.001)TSR;T(0.201)YS(0.799)LGSALRPSTSR 141.59 0.0026255 41775000 126613 152169 120184 143704 139554 171186 181954.3 156017.4 190859 150574 TRUE FALSE 136306.5886 144612.5087 124190.8746 131962.9235 134074.4088 177700.6032 158063.4818 176409.4099 207459.5708 145660.7827 0.935780971 0.99280332 0.852603372 0.905960555 0.920456462 1.219961886 1.085147827 1.211097501 1.424265111 1 17.15225298 -6.758277422 24.90215464 1.194853917 0.920787805 0.609218061 0.106680529 52.85325048 416248.8554 0.03571208 0.03428434 1.74E-07 6.758277422 -0.274066111 TYS(ph)LTTPAR ddPTM_A459_MK2206_30min_R1 3 TYSLTTPAR 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.004)YS(0.985)LT(0.009)T(0.002)PAR;T(0.008)YS(0.967)LT(0.021)T(0.004)PAR;T(0.007)YS(0.992)LT(0.002)TPAR 113.44 0.0091106 128839000 11316.7 9837.6 10043.9 8579 12996.8 12299.4 13957.2 12688.7 10152.3 9301.8 TRUE FALSE 10354.15524 9197.170452 9362.148052 9239.756066 12479.10993 12995.7814 13026.14065 12577.76403 11207.66792 10454.17721 0.990432344 0.879760336 0.895541358 0.883833886 1.19369604 1.243118529 1.246022561 1.203132851 1.072075563 1 13.3517919 -6.262684819 24.98085406 1.178320536 0.908857525 0.703250558 0.078118638 56.02888886 1123814.924 0.023455429 0.028091004 5.46E-07 6.262684819 -0.269463011 TYS(ph)LTTPAR ddPTM_A459_MK2206_30min_R2 4 TYSLTTPAR 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.055)YS(0.935)LT(0.01)TPAR;T(0.016)YS(0.94)LT(0.044)TPAR;T(0.044)YS(0.942)LT(0.015)TPAR;T(0.008)YS(0.969)LT(0.022)TPAR 106.62 0.013063 173467000 198379 242385 230878 238530 223672 235181 265813 245495 229273 249694 TRUE FALSE 213567.0488 230348.5134 238575.3573 219041.336 214889.5134 244130.9778 230911.4338 277582.0394 249214.7511 241546.5052 0.884165344 0.953640431 0.987699479 0.906828835 0.889640333 1.010699689 0.955970916 1.149186734 1.031746458 1 17.88194145 -7.374000511 1.906548209 1.063081507 0.932950385 0.478569771 0.054319318 0.279132246 1.978573231 0.029320985 0.016833031 4.23E-08 7.374000511 -0.130131121 TYS(ph)MICLAIDDDDKTDK ddPTM_A459_MK2206_30min_R1 1 TYSMICLAIDDDDKTDK 17 1 Q8IUC4-2;Q8IUC4 Q8IUC4-2 RHPN2 Rhophilin-2 1 T(0.34)YS(0.66)MICLAIDDDDKTDK 179.87 4.39E-08 21075000 1603.8 2092.9 2134.4 2494.6 1382.9 1066.5 1769.8 1631.6 1982.5 1590.4 TRUE FALSE 1467.388388 1956.65183 1989.522875 2686.734524 1327.816165 1126.884308 1651.739871 1617.335093 2188.587969 1787.430759 0.820948381 1.094672798 1.113062906 1.503126491 0.742862994 0.630449209 0.924086073 0.904837899 1.224432308 1 10.80367164 -4.742346417 23.17426566 1.007219281 0.820946824 0.0581293 0.232646 1882.280441 2284327.357 0.062566214 1.932811021 1.81E-05 4.742346417 -0.186272457 TYS(ph)SSGSSGGSHPSSR ddPTM_A459_MK2206_30min_R1 6 TYSSSGSSGGSHPSSR 16 0 H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9 H0Y6B5 ABI2 Abl interactor 2 1 T(0.121)YS(0.815)S(0.062)S(0.001)GS(0.001)S(0.001)GGSHPSSR;T(0.001)YS(0.485)S(0.485)S(0.028)GSSGGSHPSSR;T(0.001)YS(0.486)S(0.486)S(0.028)GSSGGSHPSSR;T(0.002)YS(0.486)S(0.486)S(0.026)GSSGGSHPSSR;T(0.015)YS(0.743)S(0.228)S(0.015)GSSGGSHPSSR;T(0.025)YS(0.47)S(0.47)S(0.034)GSSGGSHPSSR 285.04 3.89E-63 9745500 2629.17 1456.22 1587.001 1152.356 2904.83 3254.06 2781.94 2279 794.09 1242.926 TRUE FALSE 2405.545285 1361.419813 1479.279794 1241.110659 2789.12447 3438.302065 2596.361859 2259.074943 876.6384972 1396.909056 1.7220486 0.97459445 1.058966428 0.888469191 1.99663998 2.461364288 1.858647738 1.617195431 0.627555884 1 10.44802238 -8.254966657 24.31320916 0.813777909 1.565748708 0.291618792 0.472759711 470.587089 1767670.472 0.386896492 0.138211526 5.56E-09 8.254966657 0.751970799 TYS(ph)SSGSSGGSHPSSR ddPTM_A459_MK2206_30min_R2 4 TYSSSGSSGGSHPSSR 16 0 H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9 H0Y6B5 ABI2 Abl interactor 2 1 T(0.001)YS(0.481)S(0.481)S(0.037)GSSGGSHPSSR;T(0.122)YS(0.79)S(0.087)S(0.001)GSSGGSHPSSR;TYS(0.989)S(0.011)SGSSGGSHPSSR;T(0.038)YS(0.926)S(0.023)S(0.007)GS(0.002)S(0.002)GGSHPS(0.001)SR 257.48 6.34E-39 15400500 5105.83 17777.76 11835.66 26059.7 26126 41808 23282.7 16567.28 31293.8 10233.21 TRUE FALSE 5496.736271 16894.94229 12230.255 23930.53915 25100.16197 43399.03274 20225.65352 18732.68038 34015.67816 9899.301196 0.55526508 1.706680295 1.2354665 2.417396812 2.535548871 4.384050134 2.043139523 1.892323509 3.436169633 1 13.27311097 -5.799116757 3.042260534 2.652930308 1.178608464 0.325013031 0.893711455 0.289380915 5.469101086 0.257794653 0.437262658 1.59E-06 5.799116757 -1.474321844 TYSAPAINAIQGGSFES(ph)PKK ddPTM_A459_MK2206_30min_R1 2 TYSAPAINAIQGGSFESPKK 20 1 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 TYSAPAINAIQGGS(0.013)FES(0.987)PKK;TYSAPAINAIQGGS(0.004)FES(0.996)PKK 152.03 5.05E-06 34787000 8393.1 9583.4 9933.5 8185.1 4944.2 4848.8 6551.1 7563.8 10329.5 11113.6 TRUE FALSE 7679.222771 8959.518918 9259.241696 8815.51782 4747.262044 5123.334866 6114.088072 7497.670494 11403.28849 12490.43667 0.614808191 0.717310303 0.741306484 0.705781395 0.380071744 0.410180605 0.489501547 0.600272888 0.912961555 1 13.60853629 -8.31185102 3.526498146 0.991136128 0.57880288 0.620037658 0.118079657 0.179091382 4.278032025 0.128491103 0.035419645 4.88E-09 8.31185102 -0.412333248 TYSAPAINAIQGGSFES(ph)PKK ddPTM_A459_MK2206_30min_R2 2 TYSAPAINAIQGGSFESPKK 20 1 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 TYSAPAINAIQGGS(0.097)FES(0.903)PKK;TYSAPAINAIQGGS(0.32)FES(0.68)PKK 107.88 0.00022454 26965000 94787 78268 77004 69669 83785 46526 103986 75108 51593 105537 TRUE FALSE 102043.9656 74381.32493 79571.27493 63976.81984 80495.17991 48296.57953 90332.51329 84924.87348 56080.46588 102093.3363 0.999516416 0.728561996 0.779397342 0.6266503 0.788446953 0.473062996 0.884803226 0.831835618 0.54930584 1 16.63952918 -10.18491404 18.02479223 1 0.738161779 0.215319331 0.148756383 0 0 0.139206633 0.033762568 6.53E-11 10.18491404 -0.261838221 TYSAPAINAIQGGSFES(ph)PKKEK ddPTM_A459_MK2206_30min_R1 1 TYSAPAINAIQGGSFESPKKEK 22 2 Q9H4L5;Q9H4L5-5;Q9H4L5-3;Q9H4L5-7 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 1 TYSAPAINAIQGGS(0.037)FES(0.963)PKKEK 81.357 0.00041315 12529000 7395.1 8340.2 8212.4 8580.9 4488.4 4418.1 5707.4 7211.2 8073.6 6863.5 TRUE FALSE 6766.107912 7797.251464 7654.965169 9241.802405 4309.617524 4668.249004 5326.66976 7148.153239 8912.879612 7713.802197 0.87714304 1.010818176 0.9923725 1.198086517 0.558689141 0.605181321 0.69053751 0.926670539 1.155445704 1 12.91322644 -6.251173607 24.99537969 0.801598095 1.017032225 0.208317809 0.185237615 1151.39161 2803438.66 0.05910392 0.075413005 5.61E-07 6.251173607 0.21543413 TYSLGS(ph)ALRPSTSR ddPTM_A459_MK2206_30min_R1 1 TYSLGSALRPSTSR 14 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 TYSLGS(0.951)ALRPS(0.01)T(0.035)S(0.005)R 125.47 0.0065363 63961000 4359.7 3842 3848.1 3813.6 4253 3588.6 4286 3957.3 3017.9 3145.5 TRUE FALSE 3988.884621 3591.885102 3586.901693 4107.324133 4083.594004 3791.783431 4000.08876 3922.701743 3331.621505 3535.188287 1.128337247 1.016037849 1.01462819 1.161840275 1.155127725 1.072583162 1.131506566 1.109616073 0.94241699 1 11.78757134 -8.256858604 24.99600338 0.971208488 1.097358504 0.504811817 0.0504978 310.1055265 1692181.054 0.039324652 0.013763374 5.54E-09 8.256858604 0.126150015 TYSLGS(ph)ALRPSTSR ddPTM_A459_MK2206_30min_R2 2 TYSLGSALRPSTSR 14 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 TYSLGS(0.919)ALRPS(0.075)T(0.003)S(0.003)R;TYS(0.175)LGS(0.815)ALRPS(0.009)TSR 134.04 0.0032135 43384000 221360 280330 214223 276640 236610 271000 296810 228029 282226 211243 TRUE FALSE 238307.4918 266409.2198 221365.0879 254037.6271 227319.5025 281313.0949 257838.4905 257833.1732 306773.5073 204350.1582 1.166172289 1.303689814 1.083263599 1.243148668 1.112401892 1.376622839 1.261748426 1.261722406 1.501214925 1 17.64068383 -6.759169809 24.99919822 1.295462284 1.186451722 0.117960744 0.131147216 118.787675 1308440.266 0.041590415 0.039711314 1.74E-07 6.759169809 -0.109010562 TYSLGSALRPS(ph)TSR ddPTM_A459_MK2206_30min_R1 1 TYSLGSALRPSTSR 14 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 TYSLGSALRPS(0.704)T(0.244)S(0.052)R 79.326 0.019945 31160000 632.73 710.92 711.11 500.84 650.07 578.44 403.53 426.97 440.33 554.56 TRUE FALSE 578.9129909 664.6389788 662.8418345 539.4147836 624.1763354 611.1907729 376.61125 423.2370463 486.1038792 623.2630795 0.928842105 1.06638593 1.063502486 0.865468855 1.001465281 0.98063048 0.604257275 0.679066449 0.779933699 1 9.283697444 -7.236940937 22.93556544 0.739069934 0.987077724 0.477890175 0.110493635 204.386089 191347.2067 0.041026784 0.031755386 5.80E-08 7.236940937 0.24800779 TYSLGSALRPS(ph)TSR ddPTM_A459_MK2206_30min_R2 2 TYSLGSALRPSTSR 14 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 TYSLGS(0.001)ALRPS(0.775)T(0.18)S(0.044)R;TYSLGS(0.002)ALRPS(0.725)T(0.205)S(0.068)R 63.546 0.042823 29917000 33751 47400 31052 44812 50103 39993 46825 42006 41461 38419 TRUE FALSE 36335.00251 45046.18493 32087.25818 41150.71625 48135.70447 41514.96164 40676.82125 47496.32843 45067.20284 37165.39118 0.977656937 1.212046571 0.86336393 1.107232157 1.29517551 1.117032818 1.094481182 1.277971977 1.212612094 1 15.18167217 -5.997779866 24.99176859 1.17653248 1.028487077 0.24853733 0.11430121 96.37224529 1084812.583 0.031116955 0.045824065 1.01E-06 5.997779866 -0.148045403 TYSS(ph)PGSFK ddPTM_A459_MK2206_30min_R1 1 TYSSPGSFK 9 0 Q8N3Z6 Q8N3Z6 ZCCHC7 Zinc finger CCHC domain-containing protein 7 1 TYS(0.002)S(0.997)PGS(0.001)FK 134.57 0.002852 9293900 10609 9909.5 9170.8 8941 9383.7 8689.2 8156.5 7848.4 7592 6597.1 TRUE FALSE 9706.64884 9264.389749 8548.311647 9629.637369 9009.927359 9181.174995 7612.394767 7779.782266 8381.215568 7414.398554 1.309162 1.24951332 1.152933928 1.298775255 1.215193288 1.23828992 1.026704285 1.04928029 1.130397227 1 12.85611395 -7.255271423 24.51373798 1.055702138 1.241273598 0.773079641 0.05102975 181.6342549 721883.5393 0.019634292 0.014823082 5.56E-08 7.255271423 0.185571459 TYSS(ph)PGSFK ddPTM_A459_MK2206_30min_R2 3 TYSSPGSFK 9 0 Q8N3Z6 Q8N3Z6 ZCCHC7 Zinc finger CCHC domain-containing protein 7 1 TYS(0.002)S(0.998)PGSFK;T(0.015)YS(0.058)S(0.923)PGS(0.003)FK;TYSS(1)PGSFK 175.65 0.00033454 54436300 520390 557930 497637 532570 588410 477100 636190 479060 459299 528660 TRUE FALSE 560231.4585 530224.0075 514227.9692 489057.3274 565306.0669 495256.3748 552657.4888 541674.7869 499247.9968 511409.8675 1.095464703 1.03678877 1.005510456 0.956292318 1.105387484 0.968413803 1.080654723 1.059179381 0.976218936 1 18.96412047 -4.064807497 0.004518382 0.03215534 2.055639837 0.064105713 0.050291004 154166.0476 89.15366078 19170.75014 20781.11851 8.61E-05 4.064807497 2.023484497 TYSS(ph)SGSSGGSHPSSR ddPTM_A459_MK2206_30min_R1 1 TYSSSGSSGGSHPSSR 16 0 H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9 H0Y6B5 ABI2 Abl interactor 2 1 T(0.005)YS(0.327)S(0.475)S(0.193)GSSGGSHPSSR 171.85 4.81E-06 3198100 864.77 262.36 518.25 200.97 1401.9 1716.1 1460.2 824.51 261.36 307.11 TRUE FALSE 791.2167704 245.2803163 483.0726339 216.4487442 1346.059354 1813.264099 1362.792722 817.301396 288.5293073 345.1571054 2.292338063 0.710633832 1.399573198 0.627102096 3.899845414 5.253445665 3.948325853 2.367911259 0.835936166 1 8.431109374 -6.258233126 24.95235685 3.124303799 1.228510588 0.25085701 1.338881113 366.2447572 2850262.813 0.427594812 0.52906928 5.52E-07 6.258233126 -1.895793211 TYT(ph)HEVVTLWYR ddPTM_A459_MK2206_30min_R1 2 TYTHEVVTLWYR 12 0 G3V5T9;P24941;Q00526;K7EJ83 G3V5T9 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 T(0.039)Y(0.001)T(0.96)HEVVTLWYR;T(0.022)YT(0.978)HEVVTLWYR 92.269 0.029689 47601000 7098.5 7662.7 8019.3 6995.8 6516.4 6182.5 6998.9 6143.3 6617.7 5727.1 TRUE FALSE 6494.735299 7163.856837 7474.972259 7534.617728 6256.837989 6532.547807 6532.016151 6089.589776 7305.633597 6436.616385 1.00902942 1.112984899 1.161320143 1.17058673 0.972069425 1.014904014 1.014821415 0.946085554 1.135011497 1 12.65208677 -6.266262289 24.99846609 1.011224334 1.116862045 0.386164932 0.061447271 417.1327913 2162110.577 0.018840769 0.022057117 5.42E-07 6.266262289 0.10563771 TYT(ph)HEVVTLWYR ddPTM_A459_MK2206_30min_R2 1 TYTHEVVTLWYR 12 0 G3V5T9;P24941;Q00526;K7EJ83 G3V5T9 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 T(0.405)Y(0.003)T(0.592)HEVVTLWYR 106.55 0.012004 5254200 20604 23639 18165 14027 20336 19264 27720 17940 20516 17353 TRUE FALSE 22181.45808 22465.12163 18770.61203 12880.94923 19537.50646 19997.10502 24080.3307 20284.8196 22300.4446 16786.77303 1.321365223 1.338263262 1.118178699 0.7673273 1.163863145 1.191241758 1.434482414 1.20838112 1.328453334 1 14.0350373 -6.949130182 4.402025826 1.266486821 1.132302939 0.057074272 0.178796516 0.534084143 22.02557629 0.069955001 0.060179725 1.12E-07 6.949130182 -0.134183882 TYTVS(ph)PR ddPTM_A459_MK2206_30min_R2 1 TYTVSPR 7 0 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 TYTVS(1)PR 101.72 0.019741 4715500 32347 26441 34387 35542 37711 46656 41642 31871 38929 32992 TRUE FALSE 34823.51119 25127.97839 35533.44542 32638.10491 36230.27666 48431.52677 36174.35538 36036.64913 42314.97405 31915.47374 1.09111685 0.787329011 1.113361052 1.022642032 1.135194701 1.517493588 1.133442532 1.129127815 1.325845087 1 14.96196844 -6.350729771 3.592325347 1.231603245 0.993789649 0.303085604 0.153020861 0.282649981 6.888053326 0.04855082 0.056353559 4.46E-07 6.350729771 -0.237813596 VAAAAGS(ph)GPSPPGSPGHDR ddPTM_A459_MK2206_30min_R2 1 VAAAAGSGPSPPGSPGHDR 19 0 Q9BTU6 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 1 VAAAAGS(0.614)GPS(0.386)PPGSPGHDR 72.797 0.0080665 10490000 18102 27202 27436 33214 37310 47048 47381 24705 38871 27647 TRUE FALSE 19487.90304 25851.18824 28350.70255 30500.30995 35845.02193 48838.44461 41159.81779 27934.02832 42251.92932 26744.88065 0.728659189 0.966584543 1.060042216 1.140416753 1.340257315 1.826085719 1.538979303 1.044462628 1.579813717 1 14.70697515 -5.736063546 1.334423958 1.41594931 0.827035461 0.454588396 0.236985487 0.428180252 1.509947107 0.082657325 0.211106976 1.84E-06 5.736063546 -0.588913849 VAAAAGSGPS(ph)PPGS(ph)PGHDR ddPTM_A459_MK2206_30min_R2 1 VAAAAGSGPSPPGSPGHDR 19 0 Q9BTU6 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 2 VAAAAGSGPS(1)PPGS(1)PGHDR 118.36 0.0018053 7512900 29379 28140 26328 27837 25938 30416 33018 22037 30128 26868 TRUE FALSE 31628.27883 26742.60852 27205.76238 25562.62805 24919.54379 31573.50219 28682.69694 24917.31156 32748.47898 25991.29936 1.216879479 1.028906179 1.046725752 0.983507123 0.958764833 1.21477198 1.103549943 0.958678949 1.259978523 1 14.66574114 -6.745584867 24.99943488 1.10457299 1.042416105 0.075787291 0.10470087 692.8241326 1092445.683 0.034171936 0.034069687 1.80E-07 6.745584867 -0.062156885 VAAAAGSGPS(ph)PPGSPGHDR ddPTM_A459_MK2206_30min_R1 2 VAAAAGSGPSPPGSPGHDR 19 0 Q9BTU6 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 1 VAAAAGS(0.064)GPS(0.936)PPGSPGHDR;VAAAAGS(0.001)GPS(0.998)PPGS(0.001)PGHDR 262.37 1.75E-47 15923800 2138.9 1241.55 1350.16 1303.43 2840.2 2262.5 2579.3 2335.4 1397.62 1498.81 TRUE FALSE 1956.975323 1160.724869 1258.514901 1403.820404 2727.06882 2390.600795 2407.239603 2314.981844 1542.9076 1684.493898 1.16175863 0.689064455 0.747117518 0.833378148 1.618924724 1.419180442 1.429058072 1.374289243 0.915947278 1 10.71809949 -6.236871511 24.23177361 1.324736339 0.837866892 0.463634985 0.22730395 433.3952115 427465.7968 0.066925719 0.086353377 5.80E-07 6.236871511 -0.486869447 VAAAAGSGPS(ph)PPGSPGHDR ddPTM_A459_MK2206_30min_R2 3 VAAAAGSGPSPPGSPGHDR 19 0 Q9BTU6 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 1 VAAAAGSGPS(0.999)PPGSPGHDR;VAAAAGS(0.001)GPS(0.992)PPGS(0.006)PGHDR;VAAAAGS(0.001)GPS(0.992)PPGS(0.007)PGHDR 117.6 0.00030296 31123100 52278 82890 63138 92708 95316 128742 104798 52610 121632 83224 TRUE FALSE 56280.44387 78773.80313 65242.98941 85133.45984 91573.41492 133641.367 91037.89672 59486.30764 132211.3315 80508.4077 0.699062936 0.978454368 0.810387278 1.057448064 1.137439151 1.659967833 1.130787446 0.738883172 1.642205271 1 16.29685183 -6.003486541 2.424753213 1.222682755 0.841428821 0.299244538 0.265959446 0.393687823 4.646943286 0.083253603 0.126861348 9.92E-07 6.003486541 -0.381253934 VAAETQSPS(ph)LFGSTK ddPTM_A459_MK2206_30min_R1 1 VAAETQSPSLFGSTK 15 0 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 VAAETQS(0.031)PS(0.967)LFGS(0.001)TK 184.87 2.12E-05 9306100 4325 4709.5 4311.2 2742.8 3445.7 2991.1 3646.6 2976.3 3261.9 3457.1 TRUE FALSE 3957.136039 4402.910694 4018.567756 2954.050931 3308.450473 3160.453497 3403.341968 2950.278523 3600.986178 3885.391648 1.018465163 1.133196108 1.034276109 0.760296824 0.851510162 0.813419543 0.875932795 0.759325903 0.926801338 1 11.92384431 -5.648775004 5.857239212 0.844797832 1.076977401 0.623083004 0.073645415 0.112887997 5.342948951 0.018551206 0.032463529 2.25E-06 5.648775004 0.232179568 VAAETQSPS(ph)LFGSTK ddPTM_A459_MK2206_30min_R2 3 VAAETQSPSLFGSTK 15 0 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 VAAETQS(0.248)PS(0.748)LFGS(0.003)TK;VAAETQS(0.106)PS(0.894)LFGSTK;VAAETQS(0.026)PS(0.974)LFGSTK 218.83 2.69E-09 31819000 168591 151197 142198 143474 116466 100812 114027 87291 77476.5 115441 TRUE FALSE 181498.4566 143688.7768 146938.8103 131751.7152 111892.9596 104648.4713 99055.11793 98700.23341 84215.26592 111674.1696 1.625250111 1.286678713 1.315781535 1.179786836 1.001959182 0.937087526 0.887001159 0.883823303 0.754115891 1 16.768936 -5.429294444 0.573251646 0.847998214 1.740288212 0.894289683 0.08095061 0.590858124 0.245223209 0.047636074 0.320055682 3.72E-06 5.429294444 0.892289998 VAALAAS(ph)PASVAVDSGSELNSR ddPTM_A459_MK2206_30min_R1 1 VAALAASPASVAVDSGSELNSR 22 0 O15119;O15119-2 O15119 TBX3 T-box transcription factor TBX3 1 VAALAAS(0.999)PAS(0.001)VAVDSGSELNSR 202.94 1.95E-35 0 747.6 662.86 624.91 416.14 661.96 515.1 593.12 547.56 544.8 489.74 TRUE FALSE 684.0126942 619.7076935 582.4928503 448.1911749 635.5927315 544.2645169 553.554047 542.7727406 601.4339096 550.4126885 1.242726973 1.125896453 1.058283834 0.814282055 1.154756685 0.988829887 1.005707278 0.986119601 1.092696302 1 9.104369918 -5.027048732 2.208656675 1.008248859 1.247884593 0.440804415 0.083110325 0.36142648 2.901407685 0.021917126 0.139548898 9.40E-06 5.027048732 0.239635733 VAALAAS(ph)PASVAVDSGSELNSR ddPTM_A459_MK2206_30min_R2 2 VAALAASPASVAVDSGSELNSR 22 0 O15119;O15119-2 O15119 TBX3 T-box transcription factor TBX3 1 VAALAAS(0.999)PAS(0.001)VAVDSGSELNSR;VAALAAS(0.996)PAS(0.004)VAVDSGSELNSR 197.05 3.21E-27 3318900 51939 61987 62448 69463 56517 58893 62057 52342 57937 54745 TRUE FALSE 55915.48977 58908.81572 64529.98515 63787.6507 54297.8586 61134.21438 53908.84136 59183.27912 62976.25553 52958.67513 1.055832489 1.112354408 1.218496969 1.204479729 1.02528733 1.154375827 1.017941654 1.117537003 1.189158441 1 15.69257941 -6.255178669 24.88862235 1.090137763 1.15031015 0.159239456 0.070834647 982.3718347 3905284.36 0.021460601 0.026992367 5.56E-07 6.255178669 0.060172387 VAAS(ph)VLNPYVK ddPTM_A459_MK2206_30min_R1 1 VAASVLNPYVK 11 0 A0A494C0K9;H7C0C1;P48047 A0A494C0K9 ATP5O "ATP synthase subunit O, mitochondrial" 1 VAAS(0.997)VLNPY(0.003)VK 84.734 0.035866 4373700 2565 2418.3 2339.7 2284 2680.5 2364.7 2027.4 2225.8 1962.8 1518.9 TRUE FALSE 2346.833281 2260.86823 2180.887683 2459.914076 2573.730009 2498.58727 1892.155845 2206.340065 2166.840084 1707.072799 1.374770474 1.324412311 1.277559858 1.441012988 1.507686146 1.463667672 1.108421296 1.292469815 1.269330801 1 10.73730887 -8.676427909 0.593049093 1.000259811 1.384381173 0.556272403 0.099662117 0.878812256 0.685316118 0.119826934 0.049031995 2.11E-09 8.676427909 0.384121363 VAASGAQDPEKS(ph)PDR ddPTM_A459_MK2206_30min_R2 1 VAASGAQDPEKSPDR 15 1 Q1MSJ5;Q1MSJ5-1;Q1MSJ5-2 Q1MSJ5 CSPP1 Centrosome and spindle pole-associated protein 1 1 VAAS(0.001)GAQDPEKS(0.999)PDR 63.443 0.039729 8557500 49194 33117 35915 32598 31792 25584 45178 31482 26337 43465 TRUE FALSE 52960.33046 31472.45794 37112.38817 29934.63912 30543.68634 26557.61705 39246.07433 35596.80549 28627.74465 42046.74061 1.259558522 0.74851124 0.882646018 0.711937208 0.726422212 0.631621302 0.933391596 0.84660083 0.680855263 1 15.35970635 -4.75851015 24.94538737 0.788080485 1.259559179 0.60596367 0.112042178 51.95396732 442359.1631 0.027082549 0.184423334 1.74E-05 4.75851015 0.471478694 VAASGAQDPEKS(ph)PDRLK ddPTM_A459_MK2206_30min_R2 1 VAASGAQDPEKSPDRLK 17 2 Q1MSJ5;Q1MSJ5-1;Q1MSJ5-2 Q1MSJ5 CSPP1 Centrosome and spindle pole-associated protein 1 1 VAASGAQDPEKS(1)PDRLK 107.63 0.002741 10061000 45118 51057 52228 38281 41645 26307 53520 35709 36572 47372 TRUE FALSE 48572.26877 48521.58362 53969.25545 35153.31985 40009.80805 27308.13132 46492.75971 40376.28891 39752.96645 45826.25552 1.05992227 1.058816241 1.177692893 0.767099983 0.873076091 0.595905797 1.014544156 0.881073272 0.867471409 1 15.48388679 -5.761659424 24.99999999 0.848421302 1.094811063 0.480028121 0.115051901 4.883136484 554912.8117 0.031653808 0.05050791 1.73E-06 5.761659424 0.24638976 VAASMPLS(ph)PGGQMEEVAGAVK ddPTM_A459_MK2206_30min_R1 2 VAASMPLSPGGQMEEVAGAVK 21 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 VAAS(0.044)MPLS(0.956)PGGQMEEVAGAVK;VAASMPLS(1)PGGQMEEVAGAVK 252.1 4.13E-39 13709500 16607.5 16410.2 15685.9 14232.1 15731.4 15226.2 15877.9 15514.3 14040.2 12339.6 TRUE FALSE 15194.94492 15341.893 14621.18481 15328.25881 15104.78503 16088.29429 14818.71426 15378.66011 15499.72903 13868.32281 1.095658439 1.106254391 1.054286449 1.105271273 1.0891573 1.160074979 1.068529661 1.108905549 1.117635438 1 13.7595057 -10.54315565 4.103393474 0.999990656 1.100288236 0.555948812 0.026981786 6232646.455 0.074250387 563.7533341 0.006409421 2.86E-11 10.54315565 0.10029758 VAASMPLS(ph)PGGQMEEVAGAVK ddPTM_A459_MK2206_30min_R2 7 VAASMPLSPGGQMEEVAGAVK 21 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 VAASMPLS(1)PGGQMEEVAGAVK;VAAS(0.005)MPLS(0.995)PGGQMEEVAGAVK;VAASMPLS(1)PGGQMEEVAGAVK;VAASMPLS(1)PGGQMEEVAGAVK;VAAS(0.053)MPLS(0.947)PGGQMEEVAGAVK;VAAS(0.002)MPLS(0.998)PGGQMEEVAGAVK;VAAS(0.001)MPLS(0.999)PGGQMEEVAGAVK 228.38 8.33E-25 20796600 128996.3 148703.9 137956.1 154999.7 145980.4 133434.4 165001.1 115846.4 119475.4 149086.4 TRUE FALSE 138872.3559 141319.4806 142555.4875 142335.7287 140248.476 138512.3396 143336.2574 130987.9222 129867.1543 144221.723 0.962908729 0.979876524 0.98844671 0.986922953 0.972450426 0.960412459 0.993860387 0.908239893 0.900468748 1 17.13792896 -7.75865343 24.99993494 0.928265738 0.977797834 0.319639629 0.027075893 67.90611944 609377.0066 0.012698468 0.006912398 1.74E-08 7.75865343 0.049532096 VACIGAWHPAR ddPTM_A459_MK2206_30min_R2 2 VACIGAWHPAR 11 0 H7C422;Q92901;P39023;B5MCW2;G5E9G0 H7C422;P39023 RPL3;RPL3L 60S ribosomal protein L3-like;60S ribosomal protein L3 0 ; 137.05 0.0019184 12554900 100621 115098 104338 126065 111360 108094 124674 93485 102383 109519 FALSE TRUE 108324.6211 109382.4007 107816.5768 115765.0862 106987.4469 112207.5929 108304.154 105703.8105 111288.0883 105945.404 1.022457011 1.032441206 1.017661671 1.09268625 1.009835659 1.059107698 1.022263826 0.997719641 1.050428655 1 16.69296148 -10.43830295 9.56189091 1 1.033691789 0.131877629 0.026047831 0 0 0.024454618 0.005931116 3.64E-11 10.43830295 0.033691789 VADNS(ph)FDAK ddPTM_A459_MK2206_30min_R1 4 VADNSFDAK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VADNS(1)FDAK;VADNS(1)FDAK;VADNS(1)FDAK;VADNS(1)FDAK 136.01 0.0026767 138380600 17536 18518.4 19119 15459.9 13496 13246.9 15508.1 14893.1 15325.3 15657.8 TRUE FALSE 16044.47111 17312.84879 17821.25555 16650.62418 12958.42574 13996.92803 14473.58295 14762.8912 16918.41978 17597.60647 0.91174167 0.983818386 1.012709062 0.946186869 0.736374334 0.795388171 0.82247452 0.838914725 0.961404598 1 14.10309159 -6.024611613 23.80190439 0.845591233 0.972293487 0.306482314 0.075970523 426.7873571 412746.3256 0.022312102 0.028977165 9.45E-07 6.024611613 0.126702254 VADNS(ph)FDAK ddPTM_A459_MK2206_30min_R2 3 VADNSFDAK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VADNS(1)FDAK;VADNS(1)FDAK;VADNS(1)FDAK 113.52 0.0090656 214247000 505503 489994 464205 410454 418058 306675 535478 382965 336731 446070 TRUE FALSE 544204.6983 465661.6105 479681.363 376918.5952 401642.9423 318345.732 465169.0954 433019.8404 366019.2537 431514.7724 1.261149636 1.079132489 1.111622113 0.873477849 0.93077449 0.737740055 1.077991126 1.003487871 0.848219521 1 18.71905042 -5.261659027 1.366594798 0.924701255 1.24561295 0.524341448 0.098759004 0.514152892 1.482770141 0.030838022 0.17866788 5.47E-06 5.261659027 0.320911695 VADNS(ph)FDAKR ddPTM_A459_MK2206_30min_R2 1 VADNSFDAKR 10 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VADNS(1)FDAKR 71.529 0.036361 61517000 114640 140770 119850 120210 121420 114040 127670 102120 114530 119560 TRUE FALSE 123416.9265 133779.5665 123845.7392 110388.4585 116652.4407 118379.8721 110906.7756 115467.4346 124491.6124 115658.767 1.067078007 1.156674673 1.070785574 0.954432261 1.008591426 1.023527011 0.958913695 0.998345717 1.076369873 1 16.8195151 -5.558790891 6.322477696 1.002422687 1.112606494 0.586791842 0.037690528 0.109299607 12.36120983 0.010025048 0.017832745 2.76E-06 5.558790891 0.110183807 VADPDHDHTGFLTEY(ph)VATR ddPTM_A459_MK2206_30min_R1 4 VADPDHDHTGFLTEYVATR 19 0 P28482-2;P28482 P28482-2 MAPK1 Mitogen-activated protein kinase 1 1 VADPDHDHTGFLTEY(0.999)VAT(0.001)R;VADPDHDHTGFLT(0.001)EY(0.999)VATR;VADPDHDHTGFLTEY(0.999)VATR;VADPDHDHTGFLT(0.011)EY(0.989)VATR 213.71 3.91E-16 80360700 16082.6 17343.4 13360.9 12188.1 11882 10854.2 8320.5 6068.3 5574.9 4946.53 TRUE FALSE 14714.69042 16214.34151 12453.99933 13126.82957 11408.71478 11468.75542 7765.454627 6015.245493 6154.430805 5559.343481 2.64683959 2.916592861 2.240192457 2.361219381 2.052169437 2.062969389 1.396829437 1.082006448 1.107042734 1 12.44069881 -6.972551039 0.629658489 0.898790954 2.734620337 0.935281221 0.167375797 0.183383845 0.154283667 0.144639705 0.129595328 1.07E-07 6.972551039 1.835829383 up VADPDHDHTGFLTEY(ph)VATR ddPTM_A459_MK2206_30min_R2 7 VADPDHDHTGFLTEYVATR 19 0 P28482-2;P28482 P28482-2 MAPK1 Mitogen-activated protein kinase 1 1 VADPDHDHTGFLTEY(1)VATR;VADPDHDHTGFLTEY(1)VATR;VADPDHDHTGFLT(0.07)EY(0.929)VATR;VADPDHDHTGFLTEY(1)VATR;VADPDHDHTGFLT(0.039)EY(0.946)VAT(0.015)R;VADPDHDHTGFLTEY(1)VATR;VADPDHDHTGFLT(0.001)EY(0.998)VAT(0.001)R 168.42 3.34E-08 185234000 308427 497345 328657 404437 285527 298323 217503 196768 209063 165021 TRUE FALSE 332040.4083 472647.5705 339614.2603 371393.2034 274315.7753 309675.8908 188944.5948 222486.2532 227246.9218 159636.3783 2.079979588 2.960776081 2.127423987 2.326494796 1.718378845 1.939882965 1.183593595 1.39370647 1.423528423 1 17.28442993 -6.644670129 0.678807255 1.173137659 2.555933253 0.759486873 0.275720636 0.341965837 0.349708818 0.189782478 0.223333928 2.27E-07 6.644670129 1.382795594 up VADPDHDHTGFLTEYVAT(ph)R ddPTM_A459_MK2206_30min_R1 2 VADPDHDHTGFLTEYVATR 19 0 P28482-2;P28482 P28482-2 MAPK1 Mitogen-activated protein kinase 1 1 VADPDHDHTGFLT(0.011)EY(0.285)VAT(0.704)R;VADPDHDHTGFLT(0.009)EY(0.315)VAT(0.675)R 132.51 0.00033289 20103400 3049.9 2991.4 2522.3 2356.7 2357.6 2631.6 2013.48 1723.08 1177.5 1259.99 TRUE FALSE 2790.489989 2796.659316 2351.093304 2538.213442 2263.6918 2780.598918 1879.164423 1708.015293 1299.905339 1416.087074 1.970563845 1.974920447 1.660274532 1.792413397 1.598554102 1.963579055 1.327011918 1.20615132 0.917955797 1 10.46769426 -7.573212185 1.75996048 0.988709379 1.819884498 0.867451761 0.139630516 0.127842748 0.774270886 0.093005508 0.043926026 2.67E-08 7.573212185 0.83117512 VADPDHDHTGFLTEYVATR ddPTM_A459_MK2206_30min_R1 1 VADPDHDHTGFLTEYVATR 19 0 P28482-2;P28482 P28482-2 MAPK1 Mitogen-activated protein kinase 1 0 83.894 0.002409 5045000 2246.4 2285.3 2516.7 2233.1 2267 2056 2171.4 2575.5 1922.3 2096.3 FALSE TRUE 2055.331884 2136.526555 2345.873416 2405.093749 2176.70059 2172.408943 2026.549868 2552.982675 2122.129964 2356.00547 0.872379928 0.906842782 0.995699478 1.020835384 0.92389454 0.922072962 0.860163482 1.083606429 0.900732189 1 11.20212717 -5.055684875 4.809083554 0.961679973 0.878856954 0.194533275 0.061713966 0.308602062 15.02097199 0.015766229 0.048823585 8.80E-06 5.055684875 -0.082823019 VAEDFVS(ph)PEHVK ddPTM_A459_MK2206_30min_R2 1 VAEDFVSPEHVK 12 0 Q7LBC6;Q7LBC6-2;Q7LBC6-3;Q9Y4C1 Q7LBC6;Q9Y4C1 KDM3B;KDM3A Lysine-specific demethylase 3B;Lysine-specific demethylase 3A 1 VAEDFVS(1)PEHVK 81.676 0.037785 32359000 111870 122990 110880 131680 105440 88763 115770 83268 71830 98271 TRUE FALSE 120434.8532 116882.4954 114576.6839 120921.3228 101299.8958 92140.93816 100569.2599 94151.4135 78077.64356 95064.42532 1.266876151 1.229508252 1.205253001 1.271993413 1.065592049 0.969247306 1.057906358 0.990395862 0.82131295 1 16.53661794 -6.443892227 2.948571649 0.973192053 1.240290287 0.826389735 0.059442468 0.113073716 1.917656369 0.02058917 0.023034242 3.60E-07 6.443892227 0.267098234 VAEFHTELER ddPTM_A459_MK2206_30min_R1 1 VAEFHTELER 10 0 K7EJC1;K7EJR3;R4GMR5;P48556;K7ERW6 K7EJC1 PSMD8 26S proteasome non-ATPase regulatory subunit 8 0 98.943 0.026727 3925000 2152.9 1869.3 2023.8 1936.4 2277.1 2180.6 2132.9 1795.9 1751.1 1726.1 FALSE TRUE 1969.78455 1747.60823 1886.430095 2085.541864 2186.398285 2304.063688 1990.618133 1780.198636 1933.133111 1939.942299 1.015383061 0.900855778 0.972415569 1.075053554 1.127042947 1.18769702 1.026122341 0.917655456 0.996490005 1 10.92179803 -5.668541733 5.532293135 1.051848704 0.95362275 0.209192389 0.074678814 0.331607684 15.7114624 0.02316492 0.040537182 2.15E-06 5.668541733 -0.098225954 VAEFHTELER ddPTM_A459_MK2206_30min_R2 2 VAEFHTELER 10 0 K7EJC1;K7EJR3;R4GMR5;P48556;K7ERW6 K7EJC1 PSMD8 26S proteasome non-ATPase regulatory subunit 8 0 ; 184.71 9.52E-13 0 63173 68341 68550 73527 77768 68385 69575 64965 64265 70639 FALSE TRUE 68009.57345 64947.28532 70835.42279 67519.6089 74714.43757 70987.43909 60439.71893 73456.14856 69854.65354 68334.05522 0.995251537 0.950438037 1.036604992 0.988081399 1.093370463 1.038829598 0.884474348 1.074956672 1.022252423 1 16.06031712 -5.26415881 24.94341355 1.017693649 0.972844787 0.096061486 0.054564313 550.5668166 5050031.247 0.014340397 0.032261273 5.44E-06 5.26415881 -0.044848862 VAEIEHAEK ddPTM_A459_MK2206_30min_R1 1 VAEIEHAEK 9 0 F8VQ14;F5GWF6;P78371-2;P78371 F8VQ14 CCT2 T-complex protein 1 subunit beta 0 121.6 0.0087244 3674000 4617 4410.2 5528.2 4002.6 4169.8 4220.1 5049.6 4259.1 3085.7 4825.7 FALSE TRUE 4224.299905 4123.095178 5152.961186 4310.880946 4003.708036 4459.038415 4712.750398 4221.863138 3406.469557 5423.544148 0.778881814 0.760221557 0.950109568 0.794845737 0.738208803 0.822163201 0.86894294 0.77843252 0.62808921 1 12.40502021 -5.91417943 22.55315125 0.795793608 0.831065018 0.008092407 0.100699518 55.6820158 14616.06716 0.027961159 0.041473105 1.22E-06 5.91417943 0.03527141 VAEIEHAEK ddPTM_A459_MK2206_30min_R2 2 VAEIEHAEK 9 0 F8VQ14;F5GWF6;P78371-2;P78371 F8VQ14 CCT2 T-complex protein 1 subunit beta 0 ; 118.03 0.010317 14696200 183468 204270 207239 206680 216430 184480 207410 171025 179342 221040 FALSE TRUE 197514.4511 194126.2488 214148.2448 189793.5829 207931.8707 191500.5157 180176.8179 193378.5547 194940.843 213827.4829 0.923709378 0.907863883 1.001500097 0.887601445 0.972428183 0.895584202 0.842627035 0.904367166 0.911673468 1 17.70608777 -6.800309461 24.99635363 0.90060933 0.937570849 0.059054751 0.047197259 339.0327267 218020.8903 0.015949876 0.014066693 1.58E-07 6.800309461 0.036961519 VAELALSLSST(ph)SDDEPPSSVSHGAK ddPTM_A459_MK2206_30min_R1 2 VAELALSLSSTSDDEPPSSVSHGAK 25 0 Q5T7F5;Q8N1G2 Q5T7F5 CMTR1 Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1 1 VAELALS(0.003)LS(0.018)S(0.119)T(0.798)S(0.062)DDEPPSSVSHGAK;VAELALS(0.002)LS(0.04)S(0.343)T(0.522)S(0.093)DDEPPSSVSHGAK 166.57 7.21E-16 41071000 10075.4 4303.2 6857.1 3991.4 12964.7 12434.1 12044 9657.6 5179.8 5081.9 TRUE FALSE 9218.434322 4023.060898 6391.659157 4298.81832 12448.28855 13138.108 11240.56674 9573.164621 5718.258746 5711.484138 1.61401732 0.704380998 1.119089015 0.752662218 2.179519061 2.300296679 1.968064073 1.676125573 1.001186138 1 12.47964997 -6.254859844 24.99136759 1.766003048 1.028137042 0.299494839 0.470032976 604.5940425 2296457.448 0.142732141 0.179956902 5.56E-07 6.254859844 -0.737866006 VAEPGAEATSS(ph)TGEESGSEHPPAVPMHNK ddPTM_A459_MK2206_30min_R2 1 VAEPGAEATSSTGEESGSEHPPAVPMHNK 29 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VAEPGAEAT(0.025)S(0.068)S(0.25)T(0.25)GEES(0.22)GS(0.186)EHPPAVPMHNK 60.207 0.0023343 16013000 9456.6 10914 9176 24738 15153 19225 17323 11589 13138 16384 TRUE FALSE 10180.60457 10372.02663 9481.92326 22716.82627 14558.01708 19956.62085 15048.46929 13103.72209 14280.71949 15849.39142 0.6423341 0.654411665 0.598251567 1.433293283 0.91852215 1.259141144 0.949466695 0.826765 0.901026362 1 13.95213982 -5.708713209 24.99999983 1.034107148 0.633938887 0.544628768 0.17150574 77.44284934 36718.62732 0.047101962 0.081582899 1.96E-06 5.708713209 -0.400168261 VAEPGAEATSSTGEES(ph)GSEHPPAVPMHNK ddPTM_A459_MK2206_30min_R1 3 VAEPGAEATSSTGEESGSEHPPAVPMHNK 29 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VAEPGAEAT(0.006)S(0.022)S(0.026)T(0.026)GEES(0.46)GS(0.46)EHPPAVPMHNK;VAEPGAEAT(0.011)S(0.01)S(0.009)T(0.009)GEES(0.773)GS(0.188)EHPPAVPMHNK;VAEPGAEAT(0.044)S(0.044)S(0.011)T(0.011)GEES(0.734)GS(0.156)EHPPAVPMHNK 94.72 1.04E-07 41798500 7140.6 3900.5 4797.56 3085.96 7914.7 7771.9 8048.4 6149.23 4449.3 4570.7 TRUE FALSE 6533.254473 3646.576741 4471.914994 3323.641174 7599.440739 8211.938262 7511.505921 6095.46793 4911.820657 5136.952823 1.271815159 0.709871565 0.870538459 0.647006365 1.479367438 1.598601067 1.462249349 1.186592157 0.956173986 1 12.32669711 -6.265388787 24.99801348 1.314819731 0.86272176 0.388052162 0.247151523 340.1852217 2153219.7 0.078529501 0.092400369 5.43E-07 6.265388787 -0.452097971 VAEPGAEATSSTGEES(ph)GSEHPPAVPMHNK ddPTM_A459_MK2206_30min_R2 2 VAEPGAEATSSTGEESGSEHPPAVPMHNK 29 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VAEPGAEAT(0.03)S(0.03)S(0.026)T(0.026)GEES(0.702)GS(0.185)EHPPAVPMHNK;VAEPGAEATSSTGEES(0.59)GS(0.409)EHPPAVPMHNK 80.835 1.38E-05 47607000 33965.6 67387 57213 93152 73986 98987 91678 55350 78920 99363 TRUE FALSE 36566.03245 64040.65957 59120.45286 85541.18362 71080.93789 102754.0196 79640.56847 62584.43504 85784.31895 96120.79345 0.380417505 0.666251882 0.615064137 0.889934223 0.739495954 1.069009274 0.828546724 0.65110194 0.8924637 1 16.55256094 -4.572997113 0.776892642 0.861368363 4.72E-16 0.602316361 0.122383199 2.568111191 0.950421332 0.047587762 2.069114398 2.67E-05 4.572997113 -0.861368363 VAESAQS(ph)PAAAHTTDTAGYNAMEESVSR ddPTM_A459_MK2206_30min_R1 2 VAESAQSPAAAHTTDTAGYNAMEESVSR 28 0 P38398-8;P38398-4;P38398;P38398-7;H0Y8B8;B7ZA85;E7EUM2;A0A2R8Y7V5;P38398-6;P38398-5;P38398-3;K7EPC7 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 VAES(0.113)AQS(0.859)PAAAHT(0.024)T(0.004)DTAGYNAMEESVSR;VAES(0.027)AQS(0.97)PAAAHT(0.002)TDTAGYNAMEESVSR 105.44 8.26E-10 14313500 1911.33 1167.7 1278.59 1052.03 2302.5 2222.4 2254.05 1584.89 1120.02 1054.82 TRUE FALSE 1748.761347 1091.682518 1191.802873 1133.057533 2210.786549 2348.230367 2103.686437 1571.033474 1236.450087 1185.499065 1.475126719 0.920863246 1.00531743 0.955764172 1.864857269 1.980794786 1.774515476 1.32520853 1.042978542 1 10.21127881 -6.246311471 24.99318519 1.552279139 1.071242505 0.249393019 0.339130948 1065.492432 1760325.59 0.105907633 0.136180697 5.67E-07 6.246311471 -0.481036634 VAESAQS(ph)PAAAHTTDTAGYNAMEESVSR ddPTM_A459_MK2206_30min_R2 1 VAESAQSPAAAHTTDTAGYNAMEESVSR 28 0 P38398-8;P38398-4;P38398;P38398-7;H0Y8B8;B7ZA85;E7EUM2;A0A2R8Y7V5;P38398-6;P38398-5;P38398-3;K7EPC7 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 VAES(0.057)AQS(0.943)PAAAHTTDTAGYNAMEESVSR 154.45 2.97E-15 7991600 6038.1 19109 17447 23195 25299 33221 25626 17228 19572 15955 TRUE FALSE 6500.381579 18160.07485 18028.67427 21299.8943 24305.63414 34485.24843 22261.27542 19479.75875 21274.33718 15434.38966 0.421162205 1.176598184 1.168084691 1.380028286 1.574771318 2.234312415 1.442316536 1.262101009 1.37837243 1 13.91386081 -4.753830763 1.148306087 1.507177988 3.81E-11 0.489764852 0.309511912 1.530538356 1.616056561 0.101288543 2.839906724 1.76E-05 4.753830763 -1.507177988 VAFISLS(ph)PVR ddPTM_A459_MK2206_30min_R1 2 VAFISLSPVR 10 0 Q6ZU65-2;Q6ZU65 Q6ZU65-2 UBN2 Ubinuclein-2 1 VAFIS(0.005)LS(0.995)PVR;VAFISLS(1)PVR 142.19 0.0012261 19559600 3623.2 3579.3 3692.4 3042.3 4352.8 3127.2 3807.1 3222.5 2916.9 3507.9 TRUE FALSE 3315.027814 3346.286919 3441.770176 3276.618473 4179.418759 3304.259362 3553.135305 3194.326022 3220.122193 3942.485135 0.840847258 0.84877604 0.872995093 0.831104839 1.060097531 0.838115871 0.901242537 0.810231596 0.81677472 1 11.9448896 VAFISLS(ph)PVR ddPTM_A459_MK2206_30min_R2 2 VAFISLSPVR 10 0 Q6ZU65-2;Q6ZU65 Q6ZU65-2 UBN2 Ubinuclein-2 1 VAFIS(0.011)LS(0.989)PVR;VAFIS(0.004)LS(0.996)PVR 129 0.0030223 16979700 26138.4 35564 29346 37179 35994 35802 38009 26877 30841 27088 TRUE FALSE 28139.576 33797.94347 30324.38099 34141.35677 34580.6947 37164.4702 33018.37264 30389.91618 33523.49443 26204.12078 1.07386072 1.289794982 1.15723711 1.302900298 1.319666284 1.418268161 1.260045049 1.15973806 1.279321475 1 14.67750608 -9.719690988 0.902994277 0.994031778 1.258568414 0.391914261 0.093272311 12.44028827 8.143998305 0.374929994 0.030673404 1.91E-10 9.719690988 0.264536637 VAFISLS(ph)PVRR ddPTM_A459_MK2206_30min_R1 2 VAFISLSPVRR 11 1 Q6ZU65-2;Q6ZU65 Q6ZU65-2 UBN2 Ubinuclein-2 1 VAFIS(0.069)LS(0.931)PVRR;VAFIS(0.001)LS(0.999)PVRR 86.262 0.017307 12047700 5053.3 5986.4 5294 4357.9 4970.5 4721.2 4822.1 4451.5 4425.4 5435.3 TRUE FALSE 4623.490299 5596.684272 4934.65803 4693.546213 4772.51446 4988.510264 4500.426507 4412.581005 4885.436166 6108.665998 0.756873972 0.916187638 0.807812709 0.768342256 0.781269505 0.81662842 0.7367282 0.722347728 0.799754999 1 12.57664165 -4.475583089 18.89061811 0.804511932 0.384185508 0.028795785 0.080038383 46266469.88 408001442.8 0.019255142 733473605.8 3.35E-05 4.475583089 -0.420326424 VAFISLS(ph)PVRR ddPTM_A459_MK2206_30min_R2 2 VAFISLSPVRR 11 1 Q6ZU65-2;Q6ZU65 Q6ZU65-2 UBN2 Ubinuclein-2 1 VAFIS(0.081)LS(0.919)PVRR;VAFIS(0.001)LS(0.999)PVRR 96.059 0.010579 8522000 42139 46471 39795 45857 41615 44505 45815 41687 36392 45724 TRUE FALSE 45365.19424 44163.31772 41121.74544 42110.33641 39980.986 46198.66896 39799.43547 47135.63403 39557.31038 44232.02962 1.025618644 0.998446558 0.929682535 0.952032651 0.903892187 1.044461883 0.899787683 1.065644838 0.894313707 1 15.43280382 VAFSEITS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 VAFSEITSPSK 11 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 VAFSEIT(0.148)S(0.851)PSK 145.81 0.00069526 4141500 69878 53899 53871 51921 42743 37805 67404 54293 36324 66961 TRUE FALSE 75227.91341 51222.45404 55667.03225 47678.88821 41064.69505 39243.69577 58553.77383 61389.28152 39483.39586 64776.06805 1.161353501 0.790762014 0.859376525 0.736057153 0.63394856 0.605836337 0.903941465 0.947715466 0.609536779 1 15.98317328 -4.759534922 5.771499716 0.778637835 1.177914578 0.408949646 0.134544455 0.146829336 17.14690047 0.033944932 0.232889813 1.74E-05 4.759534922 0.399276743 VAFT(ph)GSTEVGK ddPTM_A459_MK2206_30min_R1 1 VAFTGSTEVGK 11 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 VAFT(1)GSTEVGK 147.58 0.001553 10761000 2665.2 3016.1 2356.5 1841.2 2389.1 2331.4 2703.4 1882 2413.7 2246.5 TRUE FALSE 2438.510744 2819.751342 2196.547346 1983.009543 2293.937088 2463.401853 2523.061119 1865.545872 2664.612753 2524.81338 0.965818212 1.116815747 0.86998404 0.785408363 0.908557086 0.975676805 0.999305984 0.738884659 1.05537018 1 11.30196104 -5.271757986 24.61272672 0.907406935 1.041316984 0.195283217 0.09982893 728.6020196 1737919.921 0.025497231 0.054028179 5.35E-06 5.271757986 0.133910048 VAFT(ph)GSTEVGK ddPTM_A459_MK2206_30min_R2 2 VAFTGSTEVGK 11 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 VAFT(0.895)GS(0.081)T(0.024)EVGK;VAFT(1)GSTEVGK 134.99 0.0035889 12404800 70947 74197 53913 72834 52792 51841 87566 74548 47523 74296 TRUE FALSE 76378.75687 70512.48487 55710.43251 66883.22922 50719.12082 53813.84558 76068.47901 84291.67956 51656.46464 71871.7276 1.062709349 0.981087936 0.775136961 0.930591645 0.705689462 0.748748463 1.058392243 1.172807199 0.718731362 1 16.13313674 -7.277371502 24.6930654 1.0018833 0.863836241 0.134873472 0.147127409 1365.902267 2116991.405 0.062941479 0.042592908 5.28E-08 7.277371502 -0.138047058 VAFTGS(ph)TEVGK ddPTM_A459_MK2206_30min_R1 1 VAFTGSTEVGK 11 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 VAFT(0.022)GS(0.489)T(0.489)EVGK 182.41 3.66E-05 14920000 4661.1 5117.2 4759 3728.6 3811.6 4317.6 5290.2 3500.9 3890.4 3607.3 TRUE FALSE 4264.648969 4784.06935 4435.972339 4015.777418 3659.775901 4562.058781 4937.300411 3470.292 4294.821002 4054.199558 1.051908992 1.180028087 1.09416724 0.990522879 0.902712323 1.125267446 1.217823726 0.855974638 1.059351159 1 11.98520139 -5.612964874 5.662462573 1.023578429 1.120887125 0.136246068 0.101002529 0.405588438 20.09507607 0.028574736 0.050310393 2.44E-06 5.612964874 0.097308696 VAFTGSTEVGK ddPTM_A459_MK2206_30min_R1 1 VAFTGSTEVGK 11 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 175.93 0.0010145 13428000 2063.9 2238.3 2083.1 2257.3 2025.3 2171.9 2596.4 1893.5 1814.3 1970.2 FALSE TRUE 1888.354467 2092.586263 1941.704976 2431.157637 1944.628012 2294.871101 2423.198893 1876.945329 2002.902978 2214.28325 0.852806192 0.945040009 0.876899997 1.09794338 0.87822008 1.036394554 1.094349105 0.847653673 0.904537835 1 11.11262407 -4.754918297 1.19802349 0.972958876 0.803529445 0.146238283 0.085229041 3.392878821 3.96088965 0.026455491 0.732614558 1.76E-05 4.754918297 -0.169429431 VAFTGSTEVGK ddPTM_A459_MK2206_30min_R2 1 VAFTGSTEVGK 11 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 137.46 0.018441 10556000 31502 43813 41550 38947 44732 34853 48160 34163 30763 39090 FALSE TRUE 33913.81734 41637.31013 42935.25626 35764.90551 42975.59692 36179.35534 41836.53415 38628.2214 33438.71013 37814.4965 0.896846989 1.101093866 1.135417901 0.945798803 1.136484705 0.95675888 1.106362322 1.021518861 0.884282834 1 15.20665179 -8.080050139 7.152401588 0.943977302 1.044230064 0.174166656 0.083483856 0.429820954 33.05330785 0.053370835 0.020009776 8.32E-09 8.080050139 0.100252762 VAGAAT(ph)PK ddPTM_A459_MK2206_30min_R1 1 VAGAATPK 8 0 P16402 P16402 HIST1H1D Histone H1.3 1 VAGAAT(1)PK 101.46 0.039792 4704100 10185 11486 9932.4 7566.2 4990.4 5037.6 6575.5 8718.4 1826.3 6884.5 TRUE FALSE 9318.712266 10738.25931 9258.216361 8148.950035 4791.621801 5322.824559 6136.860393 8642.175948 2016.15042 7737.403835 1.204371966 1.387837515 1.196553335 1.053189184 0.619280304 0.687934179 0.793142057 1.116934844 0.260571952 1 12.91763386 -5.974443305 2.715184529 0.752605406 1.280609679 0.527281628 0.220972078 0.209383574 3.131862599 0.064886604 0.099203122 1.06E-06 5.974443305 0.528004273 VAGGAAPSKPAS(ph)AK ddPTM_A459_MK2206_30min_R1 1 VAGGAAPSKPASAK 14 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VAGGAAPSKPAS(1)AK 121.95 0.008757 24536000 2954.1 3235.8 3157.5 2244 2144.3 1552.6 2008.1 2224.7 2224.7 2512.5 TRUE FALSE 2702.838282 3025.148832 2943.177697 2416.833269 2058.88799 1640.50687 1874.143313 2205.249682 2455.965526 2823.767468 0.957174524 1.071316553 1.042287557 0.855889621 0.729128023 0.580963868 0.663703132 0.780960085 0.869747794 1 11.46340558 -5.933923115 3.174396992 0.746481123 1.028883673 0.500853779 0.11093854 0.188276523 3.850118197 0.033649853 0.051900457 1.16E-06 5.933923115 0.28240255 VAGGAAPSKPAS(ph)AK ddPTM_A459_MK2206_30min_R2 2 VAGGAAPSKPASAK 14 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VAGGAAPSKPAS(1)AK;VAGGAAPSKPAS(1)AK 153.23 0.0017436 21210900 104749 80096 82059 67722 78606 57481 92463 63602 51652 87592 TRUE FALSE 112768.664 76118.54911 84794.8061 62188.89597 75519.53348 59668.47973 80322.49703 71914.99978 56144.59759 84733.88021 1.330856839 0.898324837 1.000719026 0.73393188 0.891255461 0.704186797 0.947938379 0.848715999 0.662599157 1 16.37065132 -2.067988392 1.060998027 0.829954778 200 0.620874129 0.11236655 396.3901866 1.487151912 0.032365328 190817.0055 0.008550896 2.067988392 199.1700452 VAGGAAPSKPAS(ph)AKK ddPTM_A459_MK2206_30min_R1 1 VAGGAAPSKPASAKK 15 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VAGGAAPS(0.322)KPAS(0.678)AKK 82.202 0.0292 19086000 5281.7 6168.6 5057.1 5696.9 4050.2 3257 4209.3 4395.5 4329.3 3834.2 TRUE FALSE 4832.46368 5767.023019 4713.838142 6135.676225 3888.871958 3441.408525 3928.505277 4357.070607 4779.346228 4309.209643 1.121426916 1.338301799 1.093898541 1.423851874 0.902455968 0.798617104 0.91165332 1.011106669 1.109100421 1 12.07320757 -6.279412015 24.99683827 0.94600886 1.240331272 0.592361412 0.117222852 569.1058011 791526.1736 0.036606102 0.041585546 5.26E-07 6.279412015 0.294322412 VAGGAAPSKPAS(ph)AKK ddPTM_A459_MK2206_30min_R2 1 VAGGAAPSKPASAKK 15 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VAGGAAPS(0.291)KPAS(0.709)AKK 82.877 0.027751 9907800 50002 50629 43799 41117 47350 27865 57739 38389 31167 55330 TRUE FALSE 53830.19157 48114.83748 45259.2368 37757.60957 45490.80109 28925.4221 50157.79994 43406.57411 33877.84932 53524.58663 1.005709618 0.898929642 0.845578446 0.705425524 0.849904762 0.540413741 0.937098315 0.810965144 0.632939953 1 15.70791413 -5.066715276 1.613281746 0.774149105 1.023868869 0.224924559 0.128991889 0.850667022 3.149948161 0.035435359 0.282059443 8.58E-06 5.066715276 0.249719764 VAGLET(ph)IS(ph)T(ph)AT(ph)GRK ddPTM_A459_MK2206_30min_R2 1 VAGLETISTATGRK 14 1 H0YEN6;E9PS18;E9PLS9;O76062 H0YEN6 TM7SF2 Delta(14)-sterol reductase 4 VAGLET(1)IS(1)T(1)AT(1)GRK 90.689 0.010368 0 22706 26176 26594 29022 26992 23583 28094 23337 22531 31433 TRUE FALSE 24444.38882 24876.1379 27480.63069 26650.80976 25932.15846 24480.46759 24405.22405 26387.22603 24490.70565 30407.34378 0.803897538 0.818096381 0.903749794 0.876459646 0.85282551 0.805084054 0.802609535 0.867791222 0.805420751 1 14.89213218 -10.84103821 5.595736507 1.00002459 0.83924763 0.666601819 0.034489304 1.13E-05 1.38E-06 0.035639414 0.008642506 1.44E-11 10.84103821 -0.16077696 VAGS(ph)PVTPLPEQEASPAR ddPTM_A459_MK2206_30min_R1 1 VAGSPVTPLPEQEASPAR 18 0 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 VAGS(0.999)PVT(0.001)PLPEQEASPAR 178.22 1.85E-09 3432600 594.76 754.07 661.21 563.98 812.03 600.4 889.91 731.38 572.27 908.44 TRUE FALSE 544.1725388 704.9799059 616.3289074 607.4178373 779.6851256 634.3941291 830.5457276 724.9856218 631.7595144 1020.984406 0.5329881 0.690490376 0.603661431 0.594933511 0.763660171 0.621355356 0.813475429 0.710084912 0.618774891 1 9.995745115 -14.52287875 0.156001173 2.197616092 0.573188142 0.654281272 0.076179236 82.44483874 0.746365271 30.66516217 0.339736067 3.00E-15 14.52287875 -1.62442795 VAGS(ph)PVTPLPEQEASPAR ddPTM_A459_MK2206_30min_R2 2 VAGSPVTPLPEQEASPAR 18 0 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 VAGS(0.984)PVT(0.016)PLPEQEASPAR;VAGS(0.997)PVT(0.003)PLPEQEASPAR 176.17 2.32E-09 11841200 20328.9 24024.6 19488.4 22012.2 14639.4 20079.2 27165 18166.6 17699.4 21032 TRUE FALSE 21885.29621 22831.5733 20138.13353 20213.73285 14064.5836 20843.32803 23598.20287 20541.037 19238.86182 20345.72756 1.075670366 1.122180233 0.989796677 0.993512411 0.691279462 1.024457246 1.159860359 1.009599531 0.945597141 1 14.31243825 -5.328430274 5.153549809 0.974805192 1.098802294 0.164751028 0.110164126 0.386583161 19.98757365 0.03162841 0.069210523 4.69E-06 5.328430274 0.123997102 VAHSFNCTPIEGMLSHQLK ddPTM_A459_MK2206_30min_R1 1 VAHSFNCTPIEGMLSHQLK 19 0 Q9UQ80;Q9UQ80-2;F8VR77;F8W0A3 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 88.319 0.0017078 10541000 3189.3 3457.8 3712.6 3050.8 3643.9 2888.4 3142 3181.4 2614.1 3030.7 FALSE TRUE 2918.033287 3232.696592 3460.599056 3285.773145 3498.755747 3051.938712 2932.402913 3153.585355 2885.84505 3406.165997 0.85669145 0.949071946 1.015980742 0.964654438 1.027182982 0.896004104 0.86091016 0.925846056 0.847241459 1 11.73393303 -6.812006321 24.99691666 0.898547445 0.965025199 0.187429449 0.057917254 158.1255195 78165.51087 0.020172897 0.017790848 1.54E-07 6.812006321 0.066477754 VAIEHLDK ddPTM_A459_MK2206_30min_R2 2 VAIEHLDK 8 0 E7ENZ3;B7ZAR1;E9PCA1;P48643-2;P48643 E7ENZ3 CCT5 T-complex protein 1 subunit epsilon 0 ; 121.05 0.0065757 3088300 67651 81090 72921 81893 76422 69734 80881 61426 69699 80739 FALSE TRUE 72830.41257 77063.18852 75352.14974 75202.07994 73421.28829 72387.77623 70261.22754 69454.58911 75761.29303 78104.49304 0.932474045 0.986667803 0.964760756 0.962839358 0.94003924 0.926806812 0.899579842 0.88925216 0.969999165 1 16.25311792 -6.39486219 2.831316686 0.928073428 0.964001368 0.081923837 0.032813331 0.452976621 7.009011473 0.010699223 0.012317964 4.03E-07 6.39486219 0.03592794 VALAAGS(ph)PARPPPAR ddPTM_A459_MK2206_30min_R2 1 VALAAGSPARPPPAR 15 1 C9J069 C9J069 C9orf172 Uncharacterized protein C9orf172 1 VALAAGS(1)PARPPPAR 63.546 0.039515 2276300 9328.5 8898.1 7705.8 10379 6203 10636 12683 6307.7 7793.5 8307.2 TRUE FALSE 10042.69713 8456.233293 7962.707526 9531.002499 5959.439052 11040.76043 11017.70686 7132.138048 8471.364543 8036.136744 1.249692166 1.052275933 0.990862622 1.186017959 0.741580095 1.373889069 1.371020332 0.887508298 1.054158834 1 12.9722864 VALHLDEEDKLR ddPTM_A459_MK2206_30min_R1 1 VALHLDEEDKLR 12 1 Q16719;B8ZZA3;A0A087X297;Q16719-2;F8WEP1 Q16719 KYNU Kynureninase 0 79.07 0.034045 11554000 6805.1 7555.4 7133.3 7093.2 7321.7 6476.9 6229.3 6654.7 6355.4 5228.6 FALSE TRUE 6226.29051 7063.542087 6649.111471 7639.519493 7030.061185 6843.616481 5813.754763 6596.518659 7016.066573 5876.358442 1.059549136 1.202027098 1.131502024 1.300043142 1.196329539 1.164601606 0.989346518 1.122552126 1.193948028 1 12.52070668 -7.026352757 23.95187472 1.085288564 1.183142825 0.273938821 0.078621135 626.9625459 569840.8319 0.030083538 0.023399501 9.41E-08 7.026352757 0.097854261 VALHLDEEDKLR ddPTM_A459_MK2206_30min_R2 1 VALHLDEEDKLR 12 1 Q16719;B8ZZA3;A0A087X297;Q16719-2;F8WEP1 Q16719 KYNU Kynureninase 0 104.22 0.0079454 5205000 53199 61877 57740 57609 72374 50231 61632 56319 52169 65231 FALSE TRUE 57271.95634 58804.27816 59665.02278 52902.16042 69532.23311 52142.5759 53539.64437 63680.08667 56706.56532 63102.51781 0.907601762 0.931884815 0.945525232 0.838352609 1.101893166 0.826315299 0.848454962 1.009152866 0.898641881 1 15.94540995 -9.964108979 0.784125851 1.004543999 0.923350415 0.076594856 0.079378082 45.65351873 20.42032369 0.718511215 0.026159625 1.09E-10 9.964108979 -0.081193585 VALS(ph)DDETK ddPTM_A459_MK2206_30min_R1 1 VALSDDETK 9 0 Q15054-2;H0YD46;Q15054-3;Q15054 Q15054-2 POLD3 DNA polymerase delta subunit 3 1 VALS(1)DDETK 127.83 0.0044695 11280000 1960 2565.5 2653.2 1669.5 1420.9 1363.9 2072.5 1691.9 2388.7 3232.7 TRUE FALSE 1793.291708 2398.485484 2473.108176 1798.085179 1364.302544 1441.122839 1934.247306 1677.107897 2637.013913 3633.191282 0.493585823 0.660159429 0.680698588 0.494905178 0.375510794 0.396654822 0.532382458 0.461607377 0.725812023 1 11.82702161 -8.553129994 3.105755777 0.999258948 0.514878274 0.728419174 0.093311474 0.147138555 3.722132848 0.102439114 0.027240293 2.80E-09 8.553129994 -0.484380674 VALS(ph)DDETK ddPTM_A459_MK2206_30min_R2 3 VALSDDETK 9 0 Q15054-2;H0YD46;Q15054-3;Q15054 Q15054-2 POLD3 DNA polymerase delta subunit 3 1 VALS(1)DDETK;VALS(0.998)DDET(0.002)K;VALS(0.997)DDET(0.003)K 127.83 0.0044695 35541200 236090 156506 166824 138425 133206 90251 176129 147978 85925 238976 TRUE FALSE 254165.2319 148734.1396 172385.8289 127115.2347 127975.6631 93685.56505 153003.0507 167319.2327 93398.60118 231178.2327 1.099434099 0.643374326 0.745683652 0.549858147 0.553580074 0.405252536 0.661840213 0.723767245 0.404011226 1 17.81864604 -2.457588687 1.260210669 0.602236277 199.8626617 0.402636923 0.16769875 537.9079415 2.847250314 0.045997446 307683.3831 0.003486674 2.457588687 199.2604255 VALS(ph)DDETKETENMR ddPTM_A459_MK2206_30min_R1 4 VALSDDETKETENMR 15 1 Q15054-2;H0YD46;Q15054-3;Q15054 Q15054-2 POLD3 DNA polymerase delta subunit 3 1 VALS(1)DDETKETENMR;VALS(0.987)DDET(0.013)KETENMR;VALS(1)DDETKETENMR;VALS(1)DDETKETENMR 222.55 6.17E-09 244089300 12145.9 14765.2 14093.2 11871.9 9977.8 8754.9 11527.5 11915.3 13308.9 11821 TRUE FALSE 11112.82742 13803.9828 13136.59285 12786.2758 9580.363098 9250.594872 10758.52151 11811.12579 14692.40778 13285.47472 0.836464459 1.039028193 0.988793635 0.96242521 0.721115602 0.69629389 0.809795791 0.889025498 1.105900097 1 13.69756216 -11.12206895 12.48268755 1.000001094 0.889794263 0.058372503 0.126169698 4.21E-06 1.35E-07 0.133973601 0.032493048 7.55E-12 11.12206895 -0.110206831 VALS(ph)DDETKETENMR ddPTM_A459_MK2206_30min_R2 3 VALSDDETKETENMR 15 1 Q15054-2;H0YD46;Q15054-3;Q15054 Q15054-2 POLD3 DNA polymerase delta subunit 3 1 VALS(1)DDETKETENMR;VALS(1)DDETKETENMR;VALS(1)DDETKETENMR 156.2 0.00078529 73611000 118109 115238 118970 113049 116158 95112 136911 97445 90208 125472 TRUE FALSE 127151.5159 109515.4485 122936.4004 103812.5351 111597.0533 98731.55381 118934.4212 110181.3961 98054.12878 121377.8589 1.047567629 0.902268745 1.01284041 0.855283954 0.919418535 0.813423096 0.979869165 0.907755311 0.807841971 1 16.88914575 -1.52290664 0.764207183 0.898894669 27.45174133 0.253038604 0.068737381 556.7697735 2.26297717 0.024128517 25495.35502 0.029998073 1.52290664 26.55284666 VALSS(ph)ETEVALAR ddPTM_A459_MK2206_30min_R2 1 VALSSETEVALAR 13 0 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VALS(0.046)S(0.941)ET(0.013)EVALAR 166.62 0.00032724 3095000 18269 23866 17551 25118 26598 22306 25397 19667 19050 19519 TRUE FALSE 19667.68869 22680.84914 18136.14158 23065.77905 25553.62888 23154.87046 22062.34339 22237.54443 20706.93457 18882.09663 1.041605129 1.201182771 0.960494056 1.221568743 1.353325819 1.226287044 1.16842657 1.177705255 1.096643819 1 14.20473135 -4.751372041 24.70338896 1.166397178 1.041604831 0.084478102 0.108565509 922.3092324 2262995.014 0.02782641 0.368137054 1.77E-05 4.751372041 -0.124792347 VANPSGNLTETYVQDR ddPTM_A459_MK2206_30min_R1 1 VANPSGNLTETYVQDR 16 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 220.46 1.30E-38 0 467.18 520.79 809.07 550.31 627.21 514.46 612.41 699.89 552.94 492.65 FALSE TRUE 427.4438877 486.8864763 754.1525826 592.6949716 602.2268976 543.5882806 571.5572463 693.7709355 610.4200917 553.6832013 0.772000824 0.879359307 1.362065132 1.070458649 1.087674136 0.981767696 1.032282079 1.253010627 1.102471757 1 9.112916941 -5.022409209 20.49378957 1.111193834 0.798839247 0.527428894 0.110181476 49.01431573 44828.33542 0.028197928 0.076702216 9.50E-06 5.022409209 -0.312354587 VANPSGNLTETYVQDR ddPTM_A459_MK2206_30min_R2 1 VANPSGNLTETYVQDR 16 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 230.57 3.77E-14 4342900 10842 12170 8101.8 7916.2 10911 11439 11387 8370.8 9341.8 9257.9 FALSE TRUE 11672.07186 11565.6555 8371.909968 7269.421137 10482.57932 11874.31916 9891.873222 9464.892301 10154.33288 8955.815481 1.303295259 1.291412884 0.934801525 0.811698405 1.170477366 1.325878049 1.104519543 1.056843156 1.133825602 1 13.12860909 -6.839662524 0.014366263 1.18E-06 2.225611877 0.069274646 0.154246671 4624.012616 27.60178985 2058.107169 2213.64523 1.45E-07 6.839662524 2.225610701 VANS(ph)PTMVNLLLGK ddPTM_A459_MK2206_30min_R1 1 VANSPTMVNLLLGK 14 0 Q6UB99;A0A2R8Y438;A0A087WTN8 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 VANS(0.837)PT(0.163)MVNLLLGK 125.61 0.0013657 1747500 1022.3 1087 881.41 794.85 980.89 830.97 799.81 865.52 922.97 780.03 TRUE FALSE 935.3480167 1016.236102 821.5823449 856.0694847 941.8190742 878.0188033 746.4561342 857.9528499 1018.916034 876.6660053 1.066937706 1.159205554 0.93716688 0.976505852 1.074319146 1.001543117 0.851471518 0.978654179 1.162262513 1 9.775883495 -5.258349352 24.98007492 0.993866551 1.113071632 0.250826603 0.079502869 357.6231788 2891025.133 0.02103729 0.050989914 5.52E-06 5.258349352 0.119205081 VANS(ph)PTMVNLLLGK ddPTM_A459_MK2206_30min_R2 2 VANSPTMVNLLLGK 14 0 Q6UB99;A0A2R8Y438;A0A087WTN8 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 VANS(0.929)PT(0.071)MVNLLLGK;VANS(0.5)PT(0.5)MVNLLLGK 178.85 7.20E-05 79281000 180076 230070 191630 254657 252315 205287 269244 199107 199225 225753 TRUE FALSE 193862.757 218645.0584 198018.8486 233850.7085 242407.8453 213099.3406 233891.9394 225130.9685 216553.2304 218386.6981 0.887704053 1.00118304 0.906734935 1.070810221 1.109993637 0.975789013 1.070999019 1.03088224 0.99160449 1 17.73652546 -5.7615568 25 1.03907916 0.938804905 0.499851186 0.047370121 2.615968603 557196.4673 0.012863514 0.020562185 1.73E-06 5.7615568 -0.100274256 VAPEEHPVLLT(ph)EAPLNPK ddPTM_A459_MK2206_30min_R1 3 VAPEEHPVLLTEAPLNPK 18 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 VAPEEHPVLLT(1)EAPLNPK;VAPEEHPVLLT(1)EAPLNPK;VAPEEHPVLLT(1)EAPLNPK 161.47 1.39E-05 51075000 18460.9 18834.3 19763.8 17641.9 18821.7 17694.6 22162.6 18855 16657.4 15270.5 TRUE FALSE 16890.70351 17608.18365 18422.28832 19000.68219 18071.99183 18696.45296 20684.17339 18690.15272 18388.99634 17162.32483 0.984173396 1.025978929 1.0734145 1.107115871 1.053003717 1.089389296 1.205208129 1.089022199 1.071474671 1 14.06695737 -5.014805922 1.341714795 1.096357105 0.96045124 0.314616043 0.048910241 0.996694741 2.161064105 0.014904835 0.165126524 9.66E-06 5.014805922 -0.135905865 VAPEEHPVLLT(ph)EAPLNPK ddPTM_A459_MK2206_30min_R2 2 VAPEEHPVLLTEAPLNPK 18 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 1 VAPEEHPVLLT(1)EAPLNPK;VAPEEHPVLLT(1)EAPLNPK 184.6 5.29E-10 21821000 94664 101835 96037 98158 86207 85475 96620 93550 83834 91374 TRUE FALSE 101911.5486 96778.02198 99238.82565 90138.17741 82822.08002 88727.81102 83933.67794 105777.3062 91125.72978 88392.47386 1.152943731 1.094867218 1.122706734 1.019749459 0.93698113 1.00379373 0.949556837 1.196677744 1.030921817 1 16.43163592 -5.761785537 24.58497686 1.020835473 1.120642049 0.331596186 0.067507152 9.642425286 684951.1793 0.019910448 0.031722711 1.73E-06 5.761785537 0.099806576 VAPEEHPVLLTEAPLNPK ddPTM_A459_MK2206_30min_R1 2 VAPEEHPVLLTEAPLNPK 18 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 0 ; 215.93 5.39E-14 667990000 17266.3 17158.4 15998.9 16028.7 17661.3 16899.1 16471.3 16050.3 13659.8 14468.3 FALSE TRUE 15797.71052 16041.38504 14912.93924 17263.23325 16957.81302 17855.91244 15372.52963 15909.97392 15079.78509 16260.74223 0.971524564 0.986510014 0.917113071 1.061651 1.042868325 1.098099471 0.945376872 0.978428518 0.927373725 1 13.98910549 -10.78146148 5.076442512 1.000000928 0.994614234 0 0.055986072 6.22E-07 9.09E-08 0.057375908 0.013913305 1.65E-11 10.78146148 -0.005386694 VAPEEHPVLLTEAPLNPK ddPTM_A459_MK2206_30min_R2 4 VAPEEHPVLLTEAPLNPK 18 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65 P60709;P63261 ACTB;ACTG1 "Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed" 0 ;;; 198.95 2.81E-10 304947000 884691 1003820 976721 1021460 994460 872710 1102000 864561 942770 968820 FALSE TRUE 952423.6232 953971.7585 1009284.391 938003.4505 955412.5036 905921.5906 957306.0763 977562.0912 1024770.43 937207.4827 1.016235616 1.017887475 1.076906031 1.000849297 1.01942475 0.966617966 1.021445191 1.043058351 1.093429629 1 19.83800895 -7.805553701 4.345310605 1.052663498 1.016777988 0.129868928 0.032963081 0.372418552 14.94173208 0.018868313 0.008943592 1.56E-08 7.805553701 -0.03588551 VAPGPSSGSTPGQVPGSSALS(ph)SPRR ddPTM_A459_MK2206_30min_R2 2 VAPGPSSGSTPGQVPGSSALSSPRR 25 1 A0A0A0MRJ3;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-5 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 VAPGPSSGSTPGQVPGS(0.02)S(0.171)ALS(0.501)S(0.308)PRR;VAPGPSSGSTPGQVPGS(0.002)S(0.011)ALS(0.629)S(0.358)PRR 134.09 2.54E-08 13359900 9126.4 19418.8 9420.9 10081.5 14464.9 18793.3 14798.6 7831.5 15196.3 7186.2 TRUE FALSE 9825.124201 18454.49063 9734.988104 9257.809201 13896.93535 19508.4922 12855.52604 8855.10394 16518.04671 6951.714883 1.4133382 2.654667365 1.400372177 1.331730279 1.999065782 2.806284856 1.849259681 1.27380137 2.376111073 1 12.7631532 -10.85178523 3.310010561 0.994646753 1.900855114 0.204934371 0.532115306 69561798.56 98018818.84 3687469.365 0.137424485 1.41E-11 10.85178523 0.90620836 VAPGPSSGSTPGQVPGSSALSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 VAPGPSSGSTPGQVPGSSALSSPR 24 0 A0A0A0MRJ3;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-5 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 VAPGPSSGSTPGQVPGS(0.001)S(0.002)ALS(0.098)S(0.9)PR 148.4 1.50E-09 6718800 7553.6 6703.2 7682.2 8888.3 8061.8 6805.4 8263.5 9114 6827.6 8324.6 TRUE FALSE 8131.909424 6370.328835 7938.320714 8162.097458 7745.253225 7064.384266 7178.492524 10305.23109 7421.452307 8052.968984 1.00980265 0.791053442 0.98576323 1.013551334 0.961788533 0.877239721 0.891409434 1.279680962 0.921579646 1 12.97530506 VAPPYPHLFSSCSPPGMVLDGS(ph)PK ddPTM_A459_MK2206_30min_R1 1 VAPPYPHLFSSCSPPGMVLDGSPK 24 0 Q9BUK6-2;Q9BUK6;V9GYF2;Q9BUK6-6;Q9BUK6-5 Q9BUK6-2 MSTO1 Protein misato homolog 1 1 VAPPYPHLFS(0.004)S(0.02)CS(0.027)PPGMVLDGS(0.948)PK 118.22 9.95E-08 7072600 2507.6 2025.3 2438.6 2292.1 2337.9 1878.5 2206.8 2347.6 1925.6 1861.1 TRUE FALSE 2294.315452 1893.452602 2273.074626 2468.637939 2244.776492 1984.859047 2059.588399 2327.075181 2125.773011 2091.667119 1.096883644 0.905236108 1.08672867 1.180225055 1.073199685 0.948936391 0.984663563 1.112545663 1.016305602 1 11.03043755 VAPPYPHLFSSCSPPGMVLDGS(ph)PK ddPTM_A459_MK2206_30min_R2 1 VAPPYPHLFSSCSPPGMVLDGSPK 24 0 Q9BUK6-2;Q9BUK6;V9GYF2;Q9BUK6-6;Q9BUK6-5 Q9BUK6-2 MSTO1 Protein misato homolog 1 1 VAPPYPHLFSSCS(0.014)PPGMVLDGS(0.986)PK 119.87 6.22E-06 0 6782.8 11009 8371.2 12369 9124.7 9009.5 13394 7856.3 7348.5 9712.9 TRUE FALSE 7302.096383 10462.30907 8650.29163 11358.41313 8766.41843 9352.362836 11635.35171 8883.145385 7987.659247 9395.968868 0.777152041 1.113489116 0.920638601 1.208860235 0.932997816 0.99535907 1.238334426 0.945420904 0.85011555 1 13.19782622 -4.748785676 24.87469707 1.026789315 0.777151418 0.271933919 0.12042542 773.052271 1519571.916 0.029392264 0.51359458 1.78E-05 4.748785676 -0.249637897 VAPVINNGS(ph)PTILGK ddPTM_A459_MK2206_30min_R1 2 VAPVINNGSPTILGK 15 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 VAPVINNGS(0.98)PT(0.02)ILGK;VAPVINNGS(0.936)PT(0.064)ILGK 220.97 1.89E-09 231040000 12296 11084.6 10405.4 8879.6 9875.1 9096.1 10095.9 8680.1 8934.2 8350.4 TRUE FALSE 11250.16063 10362.99053 9699.110439 9563.508331 9481.753856 9611.113321 9422.420932 8604.210801 9862.942061 9384.910594 1.198749899 1.104218354 1.033479258 1.019030308 1.010319039 1.024102811 1.003996877 0.916813295 1.050936177 1 13.19612729 -1.522878745 0.595402745 0.992455984 14.01298464 0.791005474 0.031996291 69.09179277 0.544011231 0.014272906 1168.725495 0.03 1.522878745 13.02052866 VAPVINNGS(ph)PTILGK ddPTM_A459_MK2206_30min_R2 2 VAPVINNGSPTILGK 15 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 VAPVINNGS(0.999)PT(0.001)ILGK;VAPVINNGS(0.991)PT(0.009)ILGK 203.05 1.07E-05 277870000 138920 138888 129118 146328 137442 116631 166244 99590 103367 115217 TRUE FALSE 149555.822 131991.0239 133422.7297 134372.5343 132045.3365 121069.4744 144415.9631 112606.7549 112357.6748 111457.4787 1.341819533 1.184227612 1.197072921 1.205594599 1.184714907 1.086239127 1.295704557 1.010311342 1.008076588 1 16.7661339 -7.77922123 24.98550842 1.006895313 1.205537257 0.68194118 0.064772667 147.2887158 206954.307 0.034668524 0.016709678 1.66E-08 7.77922123 0.198641944 VAQGATEKS(ph)PEDK ddPTM_A459_MK2206_30min_R1 2 VAQGATEKSPEDK 13 1 P49321-4;P49321;P49321-3 P49321-4 NASP Nuclear autoantigenic sperm protein 1 VAQGAT(0.005)EKS(0.995)PEDK;VAQGATEKS(1)PEDK 156.17 0.0017342 5414600 1577.21 1869.09 1865.19 1602.7 1160.84 924.2 1044.67 1502.31 1135.71 2095.99 TRUE FALSE 1443.060007 1747.411901 1738.5861 1726.140232 1114.601285 976.5274053 974.9819704 1489.175462 1253.771119 2355.657065 0.612593415 0.741793841 0.738047199 0.732763804 0.4731594 0.414545657 0.413889604 0.632169888 0.532238388 1 11.20191381 -10.8208887 3.064998158 1.002855543 0.588822733 0.510766396 0.120989691 18641389.65 24754862.56 497511.9254 0.035968721 1.51E-11 10.8208887 -0.41403281 VAQGATEKS(ph)PEDK ddPTM_A459_MK2206_30min_R2 1 VAQGATEKSPEDK 13 1 P49321-4;P49321;P49321-3 P49321-4 NASP Nuclear autoantigenic sperm protein 1 VAQGAT(0.012)EKS(0.988)PEDK 166.52 0.0015659 9228100 26636 13985 16972 13038 13811 6475.1 17467 12792 10149 19477 TRUE FALSE 28675.27264 13290.52524 17537.83801 11972.75369 13268.71075 6721.514468 15173.56192 14463.95832 11031.74167 18841.46709 1.521923559 0.705386962 0.930810639 0.635446998 0.704229171 0.356740504 0.805328048 0.767666247 0.585503328 1 14.20162368 -2.850121402 1.422595386 0.692167501 199.9999906 0.64216358 0.176140654 204.3347521 2.261998946 0.048217864 131193.389 0.001412143 2.850121402 199.3078231 VAQGATEKS(ph)PEDKVQIAANEETQER ddPTM_A459_MK2206_30min_R2 1 VAQGATEKSPEDKVQIAANEETQER 25 2 P49321-4;P49321;P49321-3 P49321-4 NASP Nuclear autoantigenic sperm protein 1 VAQGAT(0.221)EKS(0.779)PEDKVQIAANEETQER 61.612 0.0061569 5992200 10333 10272 11111 10589 8114.9 6822.3 9787.1 8310.7 5576.5 12286 TRUE FALSE 11124.10242 9761.907417 11481.43519 9723.844827 7796.268252 7081.927407 8502.042014 9396.937025 6061.53389 11885.10883 0.935969757 0.821356166 0.966035344 0.818153621 0.655969446 0.595865592 0.715352475 0.790647958 0.510010802 1 13.53686749 -6.056936129 4.317341045 0.696395019 0.899212017 0.324243477 0.126543776 0.235498649 8.978621229 0.035645165 0.048447806 8.77E-07 6.056936129 0.202816998 VAQPTITDNKDGTVTVR ddPTM_A459_MK2206_30min_R2 1 VAQPTITDNKDGTVTVR 17 1 P21333-2;P21333;Q60FE5;A0A087WWY3;H0Y5F3 P21333-2 FLNA Filamin-A 0 88.311 0.0286 5455500 8657.5 9515.7 9753.8 10250 9712.3 10856 16245 9319.7 9629.8 18656 FALSE TRUE 9320.324856 9043.164175 10078.98682 9412.542212 9330.946302 11269.13269 14112.01199 10537.81679 10467.3826 18047.25625 0.516439991 0.501082494 0.558477515 0.521549763 0.517028526 0.624423598 0.781947782 0.583901322 0.579998558 1 14.1394919 -14.52287874 0.154556956 2.539656987 0.45531729 0.791356621 0.06813049 63.00645894 0.567811381 29.7160997 0.342449576 3.00E-15 14.52287874 -2.084339697 VAQQPLSLVGCEVVPDPSPDHLY(ph)SFR ddPTM_A459_MK2206_30min_R1 1 VAQQPLSLVGCEVVPDPSPDHLYSFR 26 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 VAQQPLSLVGCEVVPDPS(0.004)PDHLY(0.709)S(0.287)FR 164.05 7.23E-14 7140100 1133.1 848.09 1060.5 828.98 1371.8 1324.2 1359.8 1058.2 912.62 775.69 TRUE FALSE 1036.723895 792.8791869 988.5162147 892.8281832 1317.158301 1399.17506 1269.090223 1048.948269 1007.490115 871.7883334 1.18919221 0.909485888 1.13389475 1.024134126 1.510869383 1.604948135 1.455732056 1.203214391 1.155659093 1 9.767834087 -6.24548305 24.45540722 1.352758189 1.058107224 0.316508843 0.181940047 697.9451161 1069701.996 0.055961813 0.071987025 5.68E-07 6.24548305 -0.294650965 VAQQPLSLVGCEVVPDPSPDHLYS(ph)FR ddPTM_A459_MK2206_30min_R2 1 VAQQPLSLVGCEVVPDPSPDHLYSFR 26 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 VAQQPLSLVGCEVVPDPSPDHLY(0.419)S(0.581)FR 196.78 4.21E-32 3881500 7331 11556 5701.4 12086 10413 10720 11016 9182.1 10901 7248.3 TRUE FALSE 7892.266997 10982.14584 5891.48183 11098.53514 10004.1333 11127.95711 9569.585967 10382.232 11849.14928 7011.788565 1.125571161 1.566240303 0.840225254 1.582839391 1.426759122 1.587035463 1.364785301 1.480682411 1.6898897 1 12.77556678 VAQRS(ph)PVDSGTILR ddPTM_A459_MK2206_30min_R1 2 VAQRSPVDSGTILR 14 1 P49454 P49454 CENPF Centromere protein F 1 VAQRS(0.988)PVDS(0.012)GTILR;VAQRS(0.805)PVDS(0.065)GT(0.13)ILR 142.95 0.0025726 16134300 3141.7 3011.8 2851.5 2360.6 2571 2816.2 2893.4 2708.8 2456.6 1947.69 TRUE FALSE 2874.481917 2815.731273 2657.948125 2542.413821 2468.591626 2975.65081 2700.386565 2685.117247 2711.972361 2188.984542 1.313157705 1.286318482 1.21423796 1.161458097 1.127733695 1.359374977 1.233625233 1.226649707 1.238918005 1 11.09604605 -9.977784745 1.341649528 0.997985839 1.238339179 0.555963284 0.064370122 82.08141182 72.10106102 1.028728067 0.01926995 1.05E-10 9.977784745 0.24035334 VARPPAAPELGALGS(ph)PDLSSLSLAVSR ddPTM_A459_MK2206_30min_R1 1 VARPPAAPELGALGSPDLSSLSLAVSR 27 1 Q01201;D6R992;D6RIV7 Q01201 RELB Transcription factor RelB 1 VARPPAAPELGALGS(0.544)PDLS(0.318)S(0.121)LS(0.018)LAVSR 124.39 4.18E-12 13482000 1362.1 1309.3 1317 1047.3 1139.4 1348.2 1762.5 1758.7 1608.1 1655.9 TRUE FALSE 1246.246242 1224.064332 1227.605709 1127.963227 1094.015285 1424.533919 1644.926841 1743.323871 1775.26775 1861.045393 0.669648493 0.657729433 0.65963233 0.606091196 0.587849866 0.765448239 0.883872498 0.936744411 0.953908892 1 10.86189753 -7.195106224 1.895921804 0.957067412 0.636890469 0.952784921 0.032402565 0.073037455 0.514192308 0.017308542 0.011479723 6.38E-08 7.195106224 -0.320176943 VARPPAAPELGALGS(ph)PDLSSLSLAVSR ddPTM_A459_MK2206_30min_R2 1 VARPPAAPELGALGSPDLSSLSLAVSR 27 1 Q01201;D6R992;D6RIV7 Q01201 RELB Transcription factor RelB 1 VARPPAAPELGALGS(1)PDLSSLSLAVSR 109.56 7.19E-10 3002500 4442.4 5793.3 5157.5 5830.8 6793.5 7075.8 6842.4 4393.8 8129.9 6062.4 TRUE FALSE 4782.51356 5505.613146 5329.448476 5354.404988 6526.753055 7345.074527 5943.984661 4968.084746 8837.024007 5864.584384 0.815490621 0.938789995 0.908751265 0.913006726 1.112909735 1.252445876 1.013538943 0.847133304 1.506845742 1 12.51781315 -6.248755998 5.443970903 1.116199959 0.89670099 0.311372244 0.166187688 0.233111674 24.26889 0.049485451 0.061346091 5.64E-07 6.248755998 -0.219498969 VARPPAAPELGALGSPDLS(ph)SLSLAVSR ddPTM_A459_MK2206_30min_R2 1 VARPPAAPELGALGSPDLSSLSLAVSR 27 1 Q01201;D6R992;D6RIV7 Q01201 RELB Transcription factor RelB 1 VARPPAAPELGALGS(0.217)PDLS(0.486)S(0.188)LS(0.109)LAVSR 82.831 4.48E-05 6595600 6875.4 6875.6 6697.8 8986.4 7907.5 7689.3 8796.6 7843.7 9158 12216 TRUE FALSE 7401.78591 6534.167702 6921.101309 8252.182374 7597.011818 7981.9217 7641.595853 8868.898521 9954.546286 11817.39292 0.626346772 0.552928023 0.585670744 0.6983082 0.64286699 0.675438462 0.646639737 0.750495357 0.842363993 1 13.52862417 -8.434640006 0.582622152 1.010555699 0.605791946 0.912807614 0.037305981 0.242575883 0.197956024 0.041923997 0.01906113 3.68E-09 8.434640006 -0.404763753 VAS(ph)DTEEADR ddPTM_A459_MK2206_30min_R2 1 VASDTEEADR 10 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 VAS(0.581)DT(0.419)EEADR 110.66 0.0093226 7306200 20773 15290 16477 16027 17692 22811 15779 14117 15834 15005 TRUE FALSE 22363.39685 14530.72083 17026.33496 14717.54283 16997.32318 23679.08859 13707.19835 15962.14037 17211.2127 14515.38808 1.540668202 1.00105631 1.17298517 1.013926927 1.170986479 1.63130937 0.944321865 1.099670245 1.185721843 1 13.82529552 -14.52287849 0.124529719 0.369264944 1.271808262 0.092841802 0.210352776 444.7681596 3.534401612 69.80383118 1.839247025 3.00E-15 14.52287849 0.902543318 VAS(ph)GPSPGEGISPQSAQAPQAPGDNHVVPVLR ddPTM_A459_MK2206_30min_R2 1 VASGPSPGEGISPQSAQAPQAPGDNHVVPVLR 32 0 Q14764 Q14764 MVP Major vault protein 1 VAS(0.478)GPS(0.413)PGEGIS(0.081)PQS(0.028)AQAPQAPGDNHVVPVLR 84.423 2.36E-07 13391000 5076.4 5282 6576.4 5344.7 5309.8 5934.8 6725.6 4494.3 5673.9 4468.4 TRUE FALSE 5465.053087 5019.703561 6795.653894 4908.020913 5101.310572 6160.652973 5842.520641 5081.720441 6167.405566 4322.596474 1.264298696 1.161270452 1.572123129 1.135433516 1.180149617 1.425220469 1.35162296 1.175617588 1.42678263 1 12.07768245 -10.62792684 4.473562571 0.999970602 1.296441027 0.302059827 0.136370221 94233483.76 2.194103487 28535.87365 0.032044415 2.36E-11 10.62792684 0.296470424 VAS(ph)GVLSPPPAAPPPSSSSVPEAGGPPIKK ddPTM_A459_MK2206_30min_R2 1 VASGVLSPPPAAPPPSSSSVPEAGGPPIKK 30 1 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VAS(0.531)GVLS(0.404)PPPAAPPPS(0.018)S(0.015)S(0.015)S(0.017)VPEAGGPPIKK 58.21 0.0019238 27843000 95572 92939 96184 111250 112150 95727 116970 78334 85699 127740 TRUE FALSE 102889.0658 88323.78441 99390.72655 102160.5191 107746.4275 99369.95806 101611.6985 88572.52276 93152.94411 123571.8543 0.83262541 0.714756487 0.804315248 0.826729677 0.871933404 0.804147179 0.822288369 0.716769391 0.753836257 1 16.91499066 -11.63655553 2.519079297 1.397944377 0.794210118 0.618686791 0.048480313 10349564.94 2250562.036 23671354.42 0.012731044 2.31E-12 11.63655553 -0.603734259 VAS(ph)LTLHNK ddPTM_A459_MK2206_30min_R1 2 VASLTLHNK 9 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 VAS(0.976)LT(0.024)LHNK;VAS(0.978)LT(0.022)LHNK 82.261 0.027642 4206200 5921.8 5449.7 5552.6 4857.8 6018.3 4838.6 5472.9 5392.6 4684.2 4012.5 TRUE FALSE 5418.119813 5094.923539 5175.704982 5231.948598 5778.578367 5112.557351 5107.812827 5345.453067 5171.139353 4509.598793 1.201463825 1.129795304 1.147708526 1.160180503 1.281395227 1.133705588 1.132653493 1.185350031 1.146696101 1 12.13878337 -9.816526416 0.694024209 0.988736564 1.172264033 0.584149647 0.043124714 6.767234482 2.828226947 0.251469649 0.016266711 1.53E-10 9.816526416 0.183527468 VAS(ph)LTLHNK ddPTM_A459_MK2206_30min_R2 2 VASLTLHNK 9 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7;Q9P0K7-4 RAI14 Ankycorbin 1 VAS(0.976)LT(0.024)LHNK;VAS(0.941)LT(0.059)LHNK 79.201 0.032771 8558700 55795 76161 73427 68594 73289 69978 73706 62702 63112 67431 TRUE FALSE 60066.7081 72378.95549 75875.01953 62989.65078 70411.30561 72641.06183 64028.31366 70897.36669 68601.36768 65230.73199 0.920834494 1.109583677 1.163179029 0.965643783 1.079419216 1.113601819 0.98156669 1.086870629 1.051672511 1 15.9932642 -8.575731714 19.17311751 0.999999998 1.056676096 0.043823758 0.071549165 6037.750684 2190278.003 0.066987945 0.017296213 2.66E-09 8.575731714 0.056676098 VAS(ph)PLDQNGSFNVVIK ddPTM_A459_MK2206_30min_R1 2 VASPLDQNGSFNVVIK 16 0 Q8IWI9;Q8IWI9-3;H3BP52;H3BTF4 Q8IWI9 MGA MAX gene-associated protein 1 VAS(1)PLDQNGSFNVVIK;VAS(1)PLDQNGSFNVVIK 207.21 4.43E-29 13522000 5707.6 6716.2 5786.6 4823.1 5320.5 5732.9 5796.7 4817.6 6425.8 5625.9 TRUE FALSE 5222.138648 6278.974159 5393.821714 5194.575998 5108.573219 6057.491844 5410.01272 4775.480231 7093.784905 6322.878965 0.825911531 0.9930562 0.853064204 0.821552338 0.8079505 0.958027487 0.855624906 0.755269911 1.121923248 1 12.62636589 -8.269887357 24.99987358 1.060961639 0.863354895 0.559806897 0.071613621 517.7561865 1532163.101 0.064722272 0.01781481 5.37E-09 8.269887357 -0.197606745 VAS(ph)PLDQNGSFNVVIK ddPTM_A459_MK2206_30min_R2 1 VASPLDQNGSFNVVIK 16 0 Q8IWI9;Q8IWI9-3;H3BP52;H3BTF4 Q8IWI9 MGA MAX gene-associated protein 1 VAS(0.999)PLDQNGS(0.001)FNVVIK 107.98 0.0032249 5625300 28927 32254 25323 28774 27184 22171 34072 29019 23783 28847 TRUE FALSE 31141.67336 30652.31326 26167.25618 26423.07216 26116.61957 23014.73294 29598.30547 32811.88294 25851.60235 27905.72475 1.115960027 1.098423837 0.937702081 0.946869232 0.935887521 0.824731597 1.06065353 1.175811889 0.926390645 1 14.7682735 -10.61163836 14.98410752 1 1.001393258 0 0.102288459 0 0 0.106040895 0.025718695 2.45E-11 10.61163836 0.001393258 VAS(ph)PTSGVK ddPTM_A459_MK2206_30min_R1 2 VASPTSGVK 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 VAS(0.718)PT(0.217)S(0.066)GVK;VAS(0.659)PT(0.265)S(0.076)GVK 84.198 0.036879 70906000 16862.7 18230 17076.2 15173.1 15653.4 14689.7 17002.7 15289.1 15403.7 17831.3 TRUE FALSE 15428.43882 17043.22369 15917.11512 16341.73479 15029.89193 15521.41812 15868.48091 15155.42901 17004.96974 20040.37606 0.769867729 0.850444305 0.794252317 0.815440526 0.749980533 0.774507328 0.791825505 0.756244741 0.848535461 1 14.29062196 -8.619910841 4.191747132 0.999969132 0.789815022 0.841850537 0.027817663 0.195143072 7.590092093 0.027490175 0.007187402 2.40E-09 8.619910841 -0.21015411 VAS(ph)SPAPPEGPSHPR ddPTM_A459_MK2206_30min_R1 2 VASSPAPPEGPSHPR 15 0 H7BYJ3;O14578;O14578-4;O14578-3 H7BYJ3 CIT Citron Rho-interacting kinase 1 VAS(0.576)S(0.424)PAPPEGPSHPR;VAS(0.579)S(0.421)PAPPEGPSHPR 108.96 0.0025564 31305000 3433.4 2468.1 2596.2 2110.09 2892.1 2942.5 3227.4 2278.87 2483 2477.2 TRUE FALSE 3141.3713 2307.426241 2419.977177 2272.609497 2776.901533 3109.101807 3012.106035 2258.94608 2741.116736 2784.094238 1.128327934 0.828788843 0.869215253 0.816283252 0.997416501 1.116737273 1.081898017 0.811375581 0.984563201 1 11.44299233 -6.371518108 11.7024389 0.999463013 0.901872425 0.131100287 0.110074607 1.226655934 123.7921285 0.035615871 0.040381098 4.25E-07 6.371518108 -0.097590587 VAS(ph)SPAPPEGPSHPR ddPTM_A459_MK2206_30min_R2 2 VASSPAPPEGPSHPR 15 0 H7BYJ3;O14578;O14578-4;O14578-3 H7BYJ3 CIT Citron Rho-interacting kinase 1 VAS(0.5)S(0.5)PAPPEGPSHPR;VAS(0.559)S(0.441)PAPPEGPSHPR 65.949 0.042712 22886800 26715 30565 23596 36470 23970 34529 28745 22724.8 27818 32700 TRUE FALSE 28760.32094 29047.18655 24382.67886 33490.28434 23028.81736 35843.02529 24970.74697 25695.00939 30237.55936 31633.00168 0.909187223 0.918255777 0.770798772 1.05871345 0.727999751 1.133089602 0.789389108 0.812284893 0.955886503 1 14.94914284 -8.515672883 22.84832895 1.000000023 0.891424167 0.084061997 0.12056349 347.313531 1101254.806 0.107989623 0.027882801 3.05E-09 8.515672883 -0.108575855 VAS(ph)SPVMVSNPATR ddPTM_A459_MK2206_30min_R1 3 VASSPVMVSNPATR 14 0 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 VAS(0.907)S(0.093)PVMVSNPATR;VAS(0.5)S(0.5)PVMVSNPATR;VAS(0.577)S(0.422)PVMVSNPATR 204.67 2.10E-05 63438000 5993.6 4959.25 5187.68 4357.12 5640.01 4703.32 5555.91 5292 4029.88 3899.94 TRUE FALSE 5483.812846 4636.401924 4835.554735 4692.706137 5415.356459 4969.617914 5185.285381 5245.732602 4448.800447 4383.09401 1.251128275 1.057792033 1.103228615 1.070637802 1.235509995 1.133815041 1.183019431 1.196810424 1.01499088 1 12.09773391 -10.61343136 4.940211977 0.999995544 1.138870907 0.238626641 0.074241933 3.54E-06 6.51E-07 0.06961255 0.016882981 2.44E-11 10.61343136 0.138875363 VASAGSAISNAS(ph)GERLSQLLK ddPTM_A459_MK2206_30min_R2 1 VASAGSAISNASGERLSQLLK 21 1 Q86YT6 Q86YT6 MIB1 E3 ubiquitin-protein ligase MIB1 1 VAS(0.001)AGS(0.003)AIS(0.043)NAS(0.775)GERLS(0.178)QLLK 55.206 0.018186 4806200 9936.1 13775 15606 15268 12069 9753.5 11963 8417.7 10141 13881 TRUE FALSE 10696.81546 13090.95353 16126.29625 14020.55556 11595.11042 10124.67628 10392.24373 9517.922292 11023.04585 13428.06411 0.796601459 0.974895072 1.200939772 1.044123371 0.863498292 0.75399374 0.773919729 0.708808226 0.820896129 1 13.71296371 -6.419971138 3.889399444 0.792052204 1.015052167 0.368637107 0.11748194 0.234688548 6.328570941 0.039052697 0.044057297 3.80E-07 6.419971138 0.222999963 VASAGSAISNASGERLS(ph)QLLK ddPTM_A459_MK2206_30min_R2 1 VASAGSAISNASGERLSQLLK 21 1 Q86YT6 Q86YT6 MIB1 E3 ubiquitin-protein ligase MIB1 1 VAS(0.001)AGS(0.019)AIS(0.013)NAS(0.104)GERLS(0.862)QLLK 49.266 0.037826 4094900 9080.2 10862 14789 12497 13051 14452 11766 8850.1 11042 9433.2 TRUE FALSE 9775.387093 10322.60887 15282.05788 11475.95512 12538.55216 15001.98099 10221.11007 10006.83846 12002.4132 9125.395457 1.071228873 1.131195785 1.674673492 1.257584417 1.374028361 1.643981465 1.12007311 1.096592307 1.315275952 1 13.15567137 VASDT(ph)EEADR ddPTM_A459_MK2206_30min_R1 2 VASDTEEADR 10 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 VAS(0.177)DT(0.823)EEADR;VAS(0.284)DT(0.716)EEADR 126.71 0.0068562 0 2935.5 2651.8 2935.4 2528.9 2703.2 2774 2974.8 2389.2 2873.2 2762.8 TRUE FALSE 2685.82031 2479.167338 2736.153226 2723.676316 2595.52582 2931.061483 2776.35652 2368.311476 3171.879422 3105.076522 0.864977172 0.79842391 0.881187052 0.877168822 0.835897538 0.94395789 0.894134653 0.762722419 1.021514091 1 11.60041311 -14.52287874 0.114255043 1.449979253 0.798285225 0.337462328 0.06339821 190.9149253 1.429758006 19.61270739 0.688384891 3.00E-15 14.52287874 -0.651694028 VASDT(ph)EEADR ddPTM_A459_MK2206_30min_R2 1 VASDTEEADR 10 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 VAS(0.085)DT(0.915)EEADR 133.91 0.0051231 6818200 16991 24020 17477 17614 16612 16064 16397 13910 13227 18765 TRUE FALSE 18291.84402 22827.20173 18059.67446 16174.87986 15959.72941 16675.32678 14244.0542 15728.08476 14377.46055 18152.69959 1.00766522 1.257510026 0.994875411 0.891045422 0.879193165 0.918614154 0.784679664 0.866432273 0.792028782 1 14.14789649 -5.569687628 3.269743214 0.868360052 1.134176673 0.612155787 0.081194597 0.136885955 2.987009267 0.021342886 0.042549966 2.69E-06 5.569687628 0.265816622 VASEAPLEHKPQVEAS(ph)SPR ddPTM_A459_MK2206_30min_R1 2 VASEAPLEHKPQVEASSPR 19 1 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 VASEAPLEHKPQVEAS(0.789)S(0.211)PR;VASEAPLEHKPQVEAS(0.5)S(0.5)PR 110.38 0.0003619 50085000 7203.9 5733.8 6255.1 5074.7 6760.9 5879.5 6538.3 7090.9 5736.9 5849.3 TRUE FALSE 6591.170476 5360.528578 5830.52124 5465.554273 6491.599037 6212.392209 6102.141937 7028.905009 6333.271285 6573.955444 1.002618672 0.815419061 0.886912193 0.831395089 0.98747232 0.945000656 0.92822989 1.069204845 0.963388228 1 12.68254596 -6.802081548 1.093238985 1.001013245 0.882684561 0.343609488 0.061287832 0.520596532 1.319832668 0.032963405 0.02862503 1.58E-07 6.802081548 -0.118328684 VASEAPLEHKPQVEAS(ph)SPR ddPTM_A459_MK2206_30min_R2 6 VASEAPLEHKPQVEASSPR 19 1 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 VASEAPLEHKPQVEAS(0.5)S(0.5)PR;VASEAPLEHKPQVEAS(0.5)S(0.5)PR;VASEAPLEHKPQVEAS(0.5)S(0.5)PR;VASEAPLEHKPQVEAS(0.613)S(0.387)PR;VASEAPLEHKPQVEAS(0.5)S(0.5)PR;VASEAPLEHKPQVEAS(0.5)S(0.5)PR 87.963 0.0017815 115355600 204453 271874.5 237833.7 289124.8 265518.2 266684.6 293003.8 205827.4 253888.6 265106.4 TRUE FALSE 220106.0789 258373.6077 245762.9569 265502.379 255092.6213 276833.4693 254532.0491 232729.7479 275971.3715 256455.9999 0.858260594 1.007477336 0.958304571 1.035274586 0.994683772 1.079457956 0.99249793 0.907484122 1.076096374 1 17.9683518 -4.760560764 24.99999771 1.003797911 0.858260424 0.453602253 0.048504641 20.13451206 572581.047 0.0118161 0.069449345 1.74E-05 4.760560764 -0.145537487 VASETHS(ph)EGSEYEELPK ddPTM_A459_MK2206_30min_R1 2 VASETHSEGSEYEELPK 17 0 Q5JSZ5;A0A494C0D3 Q5JSZ5 PRRC2B Protein PRRC2B 1 VASETHS(1)EGSEYEELPK;VASETHS(1)EGSEYEELPK 150.61 0.00016502 10018800 8809.5 5675 8771.3 6792.9 10414.7 8606.1 9514.8 9960.3 6867.5 6792.6 TRUE FALSE 8060.205764 5305.556469 8175.928594 7316.090335 9999.860446 9093.369945 8880.085053 9873.218147 7581.401201 7634.11857 1.055813542 0.694979574 1.070972178 0.958341198 1.309890638 1.191148639 1.163210261 1.293301651 0.993094505 1 12.89824588 -5.872720001 1.973009886 1.171437323 0.894296986 0.331265224 0.140409146 0.314128548 2.492352141 0.041448896 0.07393767 1.34E-06 5.872720001 -0.277140337 VASETHS(ph)EGSEYEELPK ddPTM_A459_MK2206_30min_R2 2 VASETHSEGSEYEELPK 17 0 Q5JSZ5;A0A494C0D3 Q5JSZ5 PRRC2B Protein PRRC2B 1 VAS(0.002)ET(0.017)HS(0.941)EGS(0.039)EY(0.001)EELPK;VASETHS(0.989)EGS(0.011)EYEELPK 125.23 0.000835 6826400 38849 44301 45002 51805 66856 47850 62949 51560 47058 56679 TRUE FALSE 41823.30931 42101.07676 46502.34422 47572.36578 64230.89752 49670.96528 54683.72068 58299.06903 51151.01978 54829.56887 0.762787492 0.767853507 0.848125294 0.867640705 1.171464574 0.905915664 0.997339972 1.063277903 0.932909392 1 15.74266651 -6.040801951 6.746555879 1.010370206 0.800561303 0.663621653 0.071246879 0.129912519 16.87442325 0.020695006 0.027394832 9.10E-07 6.040801951 -0.209808902 VASGPSPGEGIS(ph)PQSAQAPQAPGDNHVVPVLR ddPTM_A459_MK2206_30min_R1 4 VASGPSPGEGISPQSAQAPQAPGDNHVVPVLR 32 0 Q14764 Q14764 MVP Major vault protein 1 VAS(0.002)GPS(0.005)PGEGIS(0.869)PQS(0.124)AQAPQAPGDNHVVPVLR;VASGPS(0.002)PGEGIS(0.979)PQS(0.019)AQAPQAPGDNHVVPVLR;VASGPSPGEGIS(0.826)PQS(0.174)AQAPQAPGDNHVVPVLR;VASGPS(0.001)PGEGIS(0.96)PQS(0.039)AQAPQAPGDNHVVPVLR 152.84 3.57E-21 67036000 5673.05 5723.09 4915.95 4643.04 6001.8 5117.25 6396.52 4975.2 4389.2 4650.56 TRUE FALSE 5190.527307 5350.515801 4582.269011 5000.647745 5762.735597 5406.984273 5969.819822 4931.702351 4845.473047 5226.706483 0.993078017 1.023687827 0.876702954 0.956749296 1.102555809 1.034491661 1.142176214 0.943558313 0.927060485 1 12.35168643 -3.020446995 7.922035955 1.002224225 0.976007693 0 0.076261587 0 0 0.018570482 0 0.00095401 3.020446995 -0.026216532 VASGPSPGEGIS(ph)PQSAQAPQAPGDNHVVPVLR ddPTM_A459_MK2206_30min_R2 2 VASGPSPGEGISPQSAQAPQAPGDNHVVPVLR 32 0 Q14764 Q14764 MVP Major vault protein 1 VAS(0.003)GPS(0.007)PGEGIS(0.743)PQS(0.246)AQAPQAPGDNHVVPVLR;VAS(0.001)GPS(0.012)PGEGIS(0.975)PQS(0.012)AQAPQAPGDNHVVPVLR 89.5 1.20E-07 87534000 59508 74510 55587 65493 75902 66966 72297 49541 61977 64644 TRUE FALSE 64063.97823 70809.94175 57440.24284 60142.0124 72921.7061 69514.43806 62804.31706 56016.1788 67367.64743 62534.67157 1.02445534 1.132330913 0.918534333 0.961738678 1.166100409 1.111614346 1.004311936 0.895761941 1.07728474 1 15.93236868 -7.509707599 24.66392434 0.9819214 1.051623032 0.107106858 0.081603999 1163.165345 2178122.373 0.03718026 0.023735831 3.09E-08 7.509707599 0.069701632 VASGPSPGEGISPQS(ph)AQAPQAPGDNHVVPVLR ddPTM_A459_MK2206_30min_R2 1 VASGPSPGEGISPQSAQAPQAPGDNHVVPVLR 32 0 Q14764 Q14764 MVP Major vault protein 1 VASGPS(0.001)PGEGIS(0.208)PQS(0.791)AQAPQAPGDNHVVPVLR 80.56 5.06E-06 9023000 1651.6 4055.4 1851.9 6205 4493.7 4172.8 5594.5 1650.6 2045.4 1859.8 TRUE FALSE 1778.047766 3854.014733 1913.641422 5698.031651 4317.254759 4331.598828 4859.93543 1866.339087 2223.305195 1799.114878 0.988290291 2.142172676 1.06365716 3.167130526 2.399654859 2.407627706 2.701292446 1.037365157 1.235777227 1 10.81307159 VASGSDLHLTDIDS(ph)DSNR ddPTM_A459_MK2206_30min_R2 3 VASGSDLHLTDIDSDSNR 18 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 VASGSDLHLT(0.039)DIDS(0.73)DS(0.231)NR;VASGS(0.001)DLHLT(0.041)DIDS(0.861)DS(0.097)NR;VASGSDLHLT(0.034)DIDS(0.949)DS(0.018)NR 93.851 0.0029489 6552500 34189.8 59821 52697 74376 75789 89457 89266 63380 71668 66476 TRUE FALSE 36807.39738 56850.37613 54453.89168 68299.24288 72813.14305 92861.34882 77545.26697 71663.98362 77901.55309 64306.89356 0.572370944 0.88404793 0.84678156 1.062082758 1.132275857 1.444034126 1.205862431 1.114405931 1.211402834 1 15.97268578 -5.504112312 1.061788997 1.206674847 0.623521231 0.71374597 0.121542592 0.391960479 0.734355324 0.04431293 0.197683647 3.13E-06 5.504112312 -0.583153616 VASGVLS(ph)PPPAAPPPSSSSVPEAGGPPIKK ddPTM_A459_MK2206_30min_R1 2 VASGVLSPPPAAPPPSSSSVPEAGGPPIKK 30 1 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VAS(0.353)GVLS(0.646)PPPAAPPPSSSSVPEAGGPPIKK;VAS(0.125)GVLS(0.875)PPPAAPPPSSSSVPEAGGPPIKK 89.889 6.45E-07 59838000 10654.7 9744.3 9390.9 8396.8 8495.9 8113.4 9358.9 8651.9 8692.1 8410.2 TRUE FALSE 9748.461815 9109.944299 8753.471873 9043.522991 8157.490313 8572.773697 8734.584857 8576.25735 9595.6749 9452.11907 1.03135199 0.963799147 0.926085654 0.956772013 0.863032961 0.906968441 0.924087476 0.907336999 1.015187687 1 13.20642209 -11.07987814 14.36544907 1.000000026 0.939174994 0.101283171 0.048412834 4.18E-08 1.29E-09 0.048015095 0.011645366 8.32E-12 11.07987814 -0.060825032 VASGVLS(ph)PPPAAPPPSSSSVPEAGGPPIKK ddPTM_A459_MK2206_30min_R2 1 VASGVLSPPPAAPPPSSSSVPEAGGPPIKK 30 1 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VAS(0.058)GVLS(0.941)PPPAAPPPS(0.001)SSSVPEAGGPPIKK 75.558 2.29E-05 23964000 43855 43570 44093 54250 50230 44259 62107 37023 39721 47748 TRUE FALSE 47212.57252 41406.37716 45563.03861 49817.60146 48257.71781 45943.30726 53952.2763 41862.03322 43175.86078 46189.98667 1.022138691 0.896436222 0.986426754 1.078536823 1.044765788 0.994659461 1.16805135 0.906301046 0.934745037 1 15.49529251 -4.446242404 21.72347412 1.003737764 1.872643442 0.005524628 0.077743644 120.222508 1154077.761 0.019457069 168090.7293 3.58E-05 4.446242404 0.868905678 VASPLSPT(ph)SLTHTSRPPAALTPVPLSQGDLSHPPR ddPTM_A459_MK2206_30min_R1 1 VASPLSPTSLTHTSRPPAALTPVPLSQGDLSHPPR 35 1 I3L0Y2;I3L4Q4;Q9BUL5-4;Q9BUL5;I3L2W6;I3L410;I3L1N0;Q9BUL5-3 I3L0Y2 PHF23 PHD finger protein 23 1 VAS(0.017)PLS(0.117)PT(0.345)S(0.345)LT(0.132)HT(0.027)S(0.011)RPPAALT(0.005)PVPLSQGDLSHPPR 53.97 0.00049165 13076000 2089.5 1265.8 1482.7 1207 2646.8 2137.8 2075 1566.3 1121.9 1094.8 TRUE FALSE 1911.777053 1183.39619 1382.058455 1299.963349 2541.372351 2258.840389 1936.580536 1552.606004 1238.52552 1230.432089 1.553744468 0.96177286 1.123230178 1.056509628 2.065430814 1.835810695 1.573902821 1.26183803 1.006577714 1 10.26494932 VASPSQGQVGSS(ph)SPK ddPTM_A459_MK2206_30min_R1 1 VASPSQGQVGSSSPK 15 0 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 VASPSQGQVGS(0.012)S(0.494)S(0.494)PK 224.06 7.36E-10 5323000 1555.7 1955.9 1766 1728.1 975.74 1190.7 1199.2 1358.6 1851.9 1902.6 TRUE FALSE 1423.379546 1828.570554 1646.12884 1861.198561 936.8742096 1258.116405 1119.203556 1346.721903 2044.411632 2138.308452 0.665656793 0.855148168 0.769827589 0.870406961 0.43813801 0.588369935 0.523406039 0.629807127 0.956088272 1 11.06225426 -8.292134099 6.777977708 0.98298593 0.668857218 0.477461812 0.129931291 0.215738431 34.28900684 0.131123732 0.036022866 5.10E-09 8.292134099 -0.314128712 VASPSQGQVGSS(ph)SPK ddPTM_A459_MK2206_30min_R2 2 VASPSQGQVGSSSPK 15 0 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 VASPSQGQVGS(0.001)S(0.677)S(0.322)PK;VASPSQGQVGSS(0.5)S(0.5)PK 274.02 2.63E-45 19630700 68009 43614 48774 39538 38852 31561.2 58787 44501 39976 60892 TRUE FALSE 73215.82133 41448.19218 50400.10082 36307.61892 37326.47526 32762.28358 51068.19628 50317.43349 43453.04022 58905.09903 1.242945391 0.703643536 0.855615246 0.616374805 0.633671378 0.556187565 0.866957142 0.854211848 0.737678757 1 15.8461049 -4.758505606 24.9722327 0.745501192 1.242946074 0.552156483 0.130497807 60.50709308 514941.1122 0.03278201 0.223182609 1.74E-05 4.758505606 0.497444882 VASPSQGQVGSS(ph)SPKR ddPTM_A459_MK2206_30min_R1 2 VASPSQGQVGSSSPKR 16 1 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 VASPSQGQVGS(0.013)S(0.722)S(0.265)PKR;VASPSQGQVGS(0.061)S(0.645)S(0.294)PKR 250.1 1.98E-78 4329400 4691.7 4933 4626.6 4806 4655.3 4187 4572.4 4276.5 4995.8 3921.3 TRUE FALSE 4292.646278 4611.860803 4312.559282 5176.158953 4469.869543 4424.064322 4267.383539 4239.111011 5515.131288 4407.100248 0.974029642 1.046461515 0.978548034 1.174504473 1.014242765 1.00384926 0.968297361 0.961882138 1.251419522 1 12.105614 -8.234796677 24.98643219 1.125709922 1.018378301 0.226958858 0.081394914 947.936096 889009.8626 0.053313009 0.020136247 5.82E-09 8.234796677 -0.107331621 VASPSQGQVGSSS(ph)PK ddPTM_A459_MK2206_30min_R1 1 VASPSQGQVGSSSPK 15 0 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 VASPSQGQVGSS(0.087)S(0.913)PK 220.25 2.16E-09 3446600 1412.3 1504 1413.3 1548 1115 986.31 1246.8 1067.8 1653.8 1358.3 TRUE FALSE 1292.176469 1406.089327 1317.369134 1667.227228 1070.587189 1042.15402 1163.628247 1058.464337 1825.718428 1526.576459 0.846453816 0.921073634 0.862956537 1.092134769 0.701299423 0.682673975 0.762246948 0.693358221 1.1959561 1 10.57608413 -11.26744847 3.239643854 1.021919875 0.852653052 0.058020912 0.162905911 34648271.09 41208227.2 5134164.679 0.039655696 5.40E-12 11.26744847 -0.169266823 VASPSQGQVGSSS(ph)PKR ddPTM_A459_MK2206_30min_R1 2 VASPSQGQVGSSSPKR 16 1 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 VASPSQGQVGS(0.001)S(0.036)S(0.962)PKR;VASPSQGQVGS(0.086)S(0.053)S(0.861)PKR 184.21 1.49E-06 18639500 4030.8 4535.7 4178.3 4282.2 4280.5 3485.8 3775.3 4436.1 3867.8 3817.4 TRUE FALSE 3687.959293 4240.425106 3894.688637 4612.015786 4109.998621 3683.162984 3523.456625 4397.315645 4269.871651 4290.328332 0.859598382 0.988368437 0.907783353 1.074979682 0.957968319 0.858480447 0.821255707 1.024936859 0.995231908 1 12.06687234 VASPSQGQVGSSS(ph)PKR ddPTM_A459_MK2206_30min_R2 2 VASPSQGQVGSSSPKR 16 1 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 VASPSQGQVGS(0.041)S(0.205)S(0.754)PKR;VASPSQGQVGS(0.27)S(0.198)S(0.532)PKR 82.36 0.010351 41288000 18788.8 20636.1 23594 21435 19986.9 20496.9 24592 22148 22036 20397.9 TRUE FALSE 20227.28497 19611.34128 24380.61218 19683.69193 19202.11388 21276.92389 21363.04086 25042.81965 23952.65145 19732.31819 1.025084066 0.993869098 1.235567557 0.997535705 0.973130156 1.078277964 1.082642224 1.269127094 1.213879242 1 14.26827284 -7.586454674 8.01343549 1.181048957 1.052911154 0.205882071 0.094511392 0.346712067 38.34693035 0.044335787 0.025500378 2.59E-08 7.586454674 -0.128137802 VASS(ph)PAPPEGPSHPR ddPTM_A459_MK2206_30min_R2 1 VASSPAPPEGPSHPR 15 0 H7BYJ3;O14578;O14578-4;O14578-3 H7BYJ3 CIT Citron Rho-interacting kinase 1 VAS(0.081)S(0.919)PAPPEGPSHPR 89.877 0.010678 18970000 10698 8868.5 12710 13660 10282 8542.3 15405 3097.5 10477 14876 TRUE FALSE 11517.04711 8428.103186 13133.74506 12543.9343 9878.277017 8867.383212 13382.305 3502.353885 11388.27052 14390.59734 0.800317515 0.585667362 0.912661563 0.871675721 0.686439679 0.616192852 0.929933948 0.243377937 0.791368854 1 13.81283886 VASSSSGNNFLSGS(ph)PASPMGDILQTPQFQMR ddPTM_A459_MK2206_30min_R1 1 VASSSSGNNFLSGSPASPMGDILQTPQFQMR 31 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;Q14980-4;Q14980-3;F5H6Y5;F5H4J1;F5H763 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 VASSSSGNNFLS(0.053)GS(0.895)PAS(0.053)PMGDILQTPQFQMR 69.913 0.00013489 4606200 648.18 523.13 683.73 532.58 852.46 694.13 959.48 874.15 898.16 809.16 TRUE FALSE 593.0488873 489.0741419 637.3203126 573.5994039 818.5047131 733.4310407 895.4748399 866.5073987 991.5269461 909.4048496 0.652128573 0.537795837 0.70081033 0.630741527 0.900044368 0.806495634 0.984682279 0.952829094 1.090303121 1 9.828778887 -6.573780745 0.713523021 1.034175845 0.579119474 0.863290894 0.065554977 0.230166042 0.261058093 0.041836423 0.051866009 2.67E-07 6.573780745 -0.455056371 VATLNS(ph)EEESDPPTYK ddPTM_A459_MK2206_30min_R2 1 VATLNSEEESDPPTYK 16 0 Q00341;Q00341-2;A0A024R4E5;C9JHZ8;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JK79;C9JQ82;C9JHS7;C9JT62;C9JHN6;C9JEJ8;C9JBS3;C9JMQ6 Q00341 HDLBP Vigilin 1 VATLNS(0.993)EEES(0.007)DPPTYK 279.12 1.69E-62 9957600 110410 128230 109340 132490 112460 116690 132140 99456 96976 119070 TRUE FALSE 118863.0745 121862.2847 112985.341 121665.1432 108044.2553 121130.7197 114789.8593 112455.2407 105410.7972 115184.7557 1.031934077 1.057972333 0.980905332 1.056260809 0.938008287 1.051621102 0.996571626 0.976303158 0.915145382 1 16.81359027 -6.476291321 0.485490408 0.964997395 1.044410224 0.251208647 0.040761916 1.749519169 0.838093306 0.035351518 0.063907263 3.34E-07 6.476291321 0.079412829 VATLNS(ph)EEESDPPTYKDAFPPLPEK ddPTM_A459_MK2206_30min_R1 1 VATLNSEEESDPPTYKDAFPPLPEK 25 1 Q00341;Q00341-2;A0A024R4E5;C9JHZ8;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JK79;C9JQ82;C9JHS7;C9JT62;C9JHN6;C9JEJ8;C9JBS3 Q00341 HDLBP Vigilin 1 VAT(0.042)LNS(0.609)EEES(0.258)DPPT(0.068)Y(0.023)KDAFPPLPEK 75.661 0.00016545 13415000 1650.1 1643.3 1692.5 2263 2085.1 1445.4 1388.3 2173 903.04 443.58 TRUE FALSE 1509.75033 1536.320871 1577.617816 2437.296652 2002.046052 1527.237299 1295.68904 2154.00169 996.9142396 498.5340393 3.028379631 3.081676978 3.164513737 4.888927255 4.015866308 3.063456411 2.598998139 4.320671249 1.999691417 1 8.961548203 -8.480489699 4.609229325 1.006735059 3.503961985 0.613890183 0.663714917 0.121163312 5.979877356 0.675836259 0.17628064 3.31E-09 8.480489699 2.497226926 VATLNSEEES(ph)DPPTYK ddPTM_A459_MK2206_30min_R1 4 VATLNSEEESDPPTYK 16 0 Q00341;Q00341-2;A0A024R4E5;C9JHZ8;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JK79;C9JQ82;C9JHS7;C9JT62;C9JHN6;C9JEJ8;C9JBS3;C9JMQ6 Q00341 HDLBP Vigilin 1 VATLNSEEES(0.994)DPPT(0.006)YK;VATLNS(0.001)EEES(0.998)DPPT(0.002)YK;VATLNS(0.076)EEES(0.924)DPPTYK;VATLNS(0.137)EEES(0.863)DPPTYK 228.99 3.49E-15 333869000 16923.9 17543.6 17446.3 14519.97 15661.9 14922.68 17586.3 14756.72 15789.8 15449.1 TRUE FALSE 15484.43343 16401.50845 16262.09376 15638.30061 15038.05336 15767.58925 16413.15002 14627.70355 17431.20621 17363.05114 0.89180371 0.944621329 0.936591941 0.900665469 0.866095091 0.908111663 0.945291808 0.842461583 1.003925293 1 14.08373287 -8.289594207 24.34753302 1.001962742 0.906943504 0.605633131 0.031422045 413.2833709 357391.3583 0.030189452 0.007802048 5.13E-09 8.289594207 -0.095019238 VATLNSEEES(ph)DPPTYK ddPTM_A459_MK2206_30min_R2 4 VATLNSEEESDPPTYK 16 0 Q00341;Q00341-2;A0A024R4E5;C9JHZ8;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JK79;C9JQ82;C9JHS7;C9JT62;C9JHN6;C9JEJ8;C9JBS3;C9JMQ6 Q00341 HDLBP Vigilin 1 VATLNS(0.118)EEES(0.882)DPPTYK;VATLNS(0.395)EEES(0.605)DPPTYK;VATLNSEEES(1)DPPTYK;VATLNS(0.001)EEES(0.999)DPPTYK 252.1 1.45E-29 367039000 170619 191841 176568 197601 189210 164055 205368 162288 153360 179001 TRUE FALSE 183681.7218 182314.4549 182454.689 181456.3662 181780.6647 170298.228 178402.9349 183499.5988 166698.9756 173160.212 1.060761705 1.052865741 1.053675592 1.04791028 1.049783103 0.983472046 1.030276718 1.059709945 0.962686368 1 17.40174795 -6.58490898 0.373914966 0.995939292 1.071997052 0.419257776 0.025526782 1.954837844 0.52967854 0.027876056 0.058366631 2.60E-07 6.58490898 0.07605776 VATLNSEEESDPPT(ph)YKDAFPPLPEK ddPTM_A459_MK2206_30min_R1 1 VATLNSEEESDPPTYKDAFPPLPEK 25 1 Q00341;Q00341-2;A0A024R4E5;C9JHZ8;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JK79;C9JQ82;C9JHS7;C9JT62;C9JHN6;C9JEJ8;C9JBS3 Q00341 HDLBP Vigilin 1 VAT(0.017)LNS(0.275)EEES(0.057)DPPT(0.343)Y(0.307)KDAFPPLPEK 53.747 0.021633 13777000 3123.8 2853.9 3169 3488.2 3522.3 2290.1 2007.8 3740.2 1462.3 868.5 TRUE FALSE 2858.104406 2668.110591 2953.897109 3756.861768 3381.999332 2419.763483 1873.863325 3707.499826 1614.311318 976.0963368 2.928096642 2.733450061 3.026235217 3.84886371 3.464821253 2.47902117 1.919752441 3.798292941 1.653844254 1 9.930879733 -8.790732975 0.662187006 0.946562889 3.100926929 0.521023736 0.615545502 0.97463932 0.869457074 0.674319948 0.252434285 1.62E-09 8.790732975 2.15436404 VATTPGS(ph)PSLGR ddPTM_A459_MK2206_30min_R2 3 VATTPGSPSLGR 12 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 VAT(0.016)T(0.244)PGS(0.559)PS(0.181)LGR;VATT(0.005)PGS(0.728)PS(0.267)LGR;VAT(0.013)T(0.093)PGS(0.667)PS(0.227)LGR 143.55 0.00081657 132222900 183285 258346 263497 303571 234219 195555 223956 190305 206871 192262 TRUE FALSE 197317.4405 245516.9133 272281.8585 278768.2782 225022.3852 202996.9826 194550.3082 215178.5169 224864.2656 185988.5067 1.06091201 1.320064974 1.463971421 1.498846801 1.20987253 1.091449069 1.046034035 1.156945237 1.209022373 1 17.50485395 -6.508057532 5.924850459 1.110660419 1.345937056 0.451908009 0.121636975 0.163409875 21.38948452 0.041516517 0.044619962 3.10E-07 6.508057532 0.235276637 VATTPGSPS(ph)LGR ddPTM_A459_MK2206_30min_R1 4 VATTPGSPSLGR 12 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 VATT(0.001)PGS(0.346)PS(0.652)LGR;VAT(0.006)T(0.01)PGS(0.32)PS(0.663)LGR;VATT(0.002)PGS(0.299)PS(0.699)LGR;VAT(0.001)T(0.021)PGS(0.325)PS(0.653)LGR 122.46 0.0035367 81962300 11967.5 10366.3 10346.4 8688.9 12834.6 9478.1 12031.6 10473 10679.9 10656.2 TRUE FALSE 10949.60128 9691.451986 9644.115195 9358.120584 12323.3707 10014.74183 11228.99392 10381.43567 11790.11382 11976.37051 0.914267079 0.809214443 0.805261927 0.78138202 1.028973736 0.836208418 0.937595736 0.866826528 0.984447986 1 13.54790314 -7.655750087 0.366193148 1.004921294 0.824385568 0.329758569 0.069328336 1.504146796 0.573976644 0.089898125 0.090329717 2.21E-08 7.655750087 -0.180535726 VATTPGSPS(ph)LGR ddPTM_A459_MK2206_30min_R2 1 VATTPGSPSLGR 12 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;A0A087WWW7;H0Y4U1 E9PGF5 TNS1 Tensin-1 1 VATT(0.003)PGS(0.328)PS(0.669)LGR 87.831 0.027981 2706400 21430 24286 18473 29797 27435 24031 25235 19933 21170 25192 TRUE FALSE 23070.69728 23079.99256 19088.8806 27362.48978 26357.76405 24945.51654 21921.61419 22538.31154 23011.32833 24369.9871 0.946684837 0.947066261 0.783294653 1.122794594 1.081566598 1.023616321 0.89953327 0.924838878 0.944248687 1 14.57281787 -5.757331779 24.99999576 0.996639582 0.897820395 0.288459576 0.076893167 163.3067959 993913.8654 0.023348522 0.038633459 1.75E-06 5.757331779 -0.098819187 VAVAT(ph)PAK ddPTM_A459_MK2206_30min_R1 1 VAVATPAK 8 0 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 NCL Nucleolin 1 VAVAT(1)PAK 109.83 0.028726 37342000 13958 14605 11780 11359 10327 9677.3 11229 9463.7 10411 10478 TRUE FALSE 12770.7988 13654.21185 10980.40642 12233.87215 9915.653722 10225.22036 10479.9339 9380.959869 11493.26071 11776.09374 1.084468167 1.159485661 0.932431981 1.038873536 0.842015522 0.868303241 0.889932954 0.796610495 0.97598244 1 13.52357344 -5.566427764 1.195791289 0.887134186 1.133841062 0.530421299 0.07445175 0.401501902 1.035445916 0.024175563 0.087564603 2.71E-06 5.566427764 0.246706875 VAVEEVDEEGKFVR ddPTM_A459_MK2206_30min_R1 2 VAVEEVDEEGKFVR 14 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 205.31 3.84E-05 28558000 5295 4690.9 5404.2 5502 4743.3 4678.7 4475.86 4651.35 4144.61 3359.24 FALSE TRUE 4844.632445 4385.521557 5037.377961 5925.764993 4554.364317 4943.603951 4177.283546 4610.683737 4575.457041 3775.408012 1.28320765 1.161602016 1.334260547 1.569569428 1.206323741 1.309422435 1.10644559 1.22124118 1.211910614 1 11.88241685 -7.249318514 23.12116952 1.153336118 1.312041535 0.350071619 0.116281389 366.9425592 699962.585 0.046552412 0.035724996 5.63E-08 7.249318514 0.158705417 VAVEEVDEEGKFVR ddPTM_A459_MK2206_30min_R2 2 VAVEEVDEEGKFVR 14 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 179.67 0.00020538 11869600 29324 38785 30486 34374 44881 33153 46037 29573 32886 35296 FALSE TRUE 31569.06799 36858.9933 31502.38802 31565.53424 43118.74643 34414.66065 39992.2866 33438.29264 35746.36484 34144.29441 0.924578133 1.079506662 0.922625246 0.924474639 1.262838995 1.007918343 1.171272896 0.979322994 1.04692059 1 15.0593569 -4.751180833 24.55815411 1.045409193 0.92457782 0.111578271 0.100905068 811.8384597 1943312.266 0.025160903 0.333667689 1.77E-05 4.751180833 -0.120831373 VAVEYLDPS(ph)PEVQK ddPTM_A459_MK2206_30min_R1 1 VAVEYLDPSPEVQK 14 0 J3QT28;O43684-2;O43684 J3QT28 BUB3 Mitotic checkpoint protein BUB3 1 VAVEYLDPS(1)PEVQK 102.63 0.0074537 4589200 3239.4 3226.6 3453.9 2923.9 2618.8 2563.3 3063 2906.9 3150.1 2708 TRUE FALSE 2963.872019 3016.547754 3219.458891 3149.099285 2514.487651 2708.431831 2858.672859 2881.48528 3477.564168 3043.487484 0.973840712 0.991148401 1.057819001 1.034700915 0.826186296 0.889910619 0.939275378 0.946770866 1.142624764 1 11.57150972 -8.239938227 24.02287847 1.07131239 0.957266562 0.293803666 0.07060678 573.9866581 641308.6891 0.052049547 0.019625638 5.76E-09 8.239938227 -0.114045828 VAVLGVPHNPAPPT(ph)S(ph)T(ph)VIHIRS(ph)K ddPTM_A459_MK2206_30min_R1 1 VAVLGVPHNPAPPTSTVIHIRSK 23 1 C9JQL5 C9JQL5 Putative dispanin subfamily A member 2d 4 VAVLGVPHNPAPPT(1)S(1)T(1)VIHIRS(1)K 46.702 0.03568 4958800 1743.2 2365.8 2331.2 2902.5 1899.3 1429.5 1902.5 2277.8 955.56 1434.9 TRUE FALSE 1594.931686 2211.78599 2172.964639 3126.051053 1823.646859 1510.437055 1775.587696 2257.885435 1054.893882 1612.666245 0.989002958 1.371508827 1.347436053 1.938436464 1.130827203 0.936608588 1.101026143 1.400094683 0.654130317 1 10.65523218 -6.501282919 24.90857645 1.046896376 1.420460105 0.311223351 0.275407051 959.5523118 1106746.874 0.086101221 0.096703446 3.15E-07 6.501282919 0.373563729 VAVPTGPTPLDS(ph)TPPGGAPHPLTGQEEAR ddPTM_A459_MK2206_30min_R1 1 VAVPTGPTPLDSTPPGGAPHPLTGQEEAR 29 0 O94966-2;O94966-7;O94966-6;O94966-5;A0A0A0MR08;E7ESU0;O94966-4;O94966-3;O94966 O94966-2 USP19 Ubiquitin carboxyl-terminal hydrolase 19;Ubiquitin carboxyl-terminal hydrolase 1 VAVPT(0.155)GPT(0.128)PLDS(0.358)T(0.358)PPGGAPHPLTGQEEAR 87.098 2.42E-06 5933400 752.05 1024.3 665.99 584.43 822.58 876.91 710.21 744.46 732.68 635.08 TRUE FALSE 688.0841983 957.6178838 620.7844544 629.4428999 789.8148968 926.5598864 662.8331868 737.9512647 808.8447079 713.758505 0.964029421 1.341655304 0.869740185 0.881870963 1.106557598 1.29814199 0.928651893 1.033894881 1.133219012 1 9.479292221 -10.62733757 3.837978531 0.999980357 1.062758719 0.014256908 0.154471148 19919469.53 18402180.67 3167.732225 0.037639285 2.36E-11 10.62733757 0.062778362 VAVPTGPTPLDS(ph)TPPGGAPHPLTGQEEAR ddPTM_A459_MK2206_30min_R2 1 VAVPTGPTPLDSTPPGGAPHPLTGQEEAR 29 0 O94966-2;O94966-7;O94966-6;O94966-5;A0A0A0MR08;E7ESU0;O94966-4;O94966-3;O94966 O94966-2 USP19 Ubiquitin carboxyl-terminal hydrolase 19;Ubiquitin carboxyl-terminal hydrolase 1 VAVPT(0.011)GPT(0.009)PLDS(0.759)T(0.221)PPGGAPHPLTGQEEAR 106.06 1.07E-10 5182800 26095 29998 26916 25063 30512 27194 27669 20549 24077 29152 TRUE FALSE 28092.85326 28508.34294 27813.36601 23015.27273 29313.94557 28228.88673 24036.02706 23234.82486 26171.17394 28200.77263 0.996173177 1.01090645 0.986262553 0.816122063 1.039473136 1.000996927 0.852318033 0.823907386 0.928030387 1 14.78344707 -7.259056153 24.98888355 0.886389566 0.972843961 0.191343801 0.071883961 315.8167316 3311466.625 0.028795127 0.021225008 5.51E-08 7.259056153 0.086454394 VAY(ph)CFEVAAQRSPDKKT(ph)CPMK ddPTM_A459_MK2206_30min_R2 1 VAYCFEVAAQRSPDKKTCPMK 21 3 Q9H488-2;Q9H488 Q9H488-2 POFUT1 GDP-fucose protein O-fucosyltransferase 1 2 VAY(0.974)CFEVAAQRS(0.026)PDKKT(1)CPMK 50.827 0.037514 5267700 4869.5 7019.6 5402.2 5919.9 6034.3 6760.6 6396.4 4861.8 6330.7 7696 TRUE FALSE 5242.312664 6671.016871 5582.306652 5436.225233 5797.363062 7017.87937 5556.544997 5497.253953 6881.332843 7444.88015 0.704150041 0.8960543 0.749818202 0.730196474 0.778704686 0.942645043 0.746357884 0.738393882 0.924304046 1 12.86203291 -8.454762013 4.203510476 0.998714223 0.79062313 0.500110533 0.072204725 0.164204557 5.48515454 0.069408704 0.018177575 3.51E-09 8.454762013 -0.208091092 VDALHCPPAAVVTVTPSPEGVFSSLQAKPS(ph)PSPR ddPTM_A459_MK2206_30min_R1 1 VDALHCPPAAVVTVTPSPEGVFSSLQAKPSPSPR 34 1 Q6UB99 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 VDALHCPPAAVVT(0.001)VT(0.005)PS(0.01)PEGVFS(0.094)S(0.094)LQAKPS(0.398)PS(0.398)PR 42.288 0.016723 15059000 1285.9 1382 1356 1180.1 900.55 851.17 1135 1137.4 1267.8 881.32 TRUE FALSE 1176.527452 1292.031549 1263.958498 1270.991506 864.6791866 899.3625098 1059.286221 1127.455832 1399.592347 990.5045752 1.187806177 1.304417548 1.276075376 1.283175806 0.872968392 0.907984206 1.069441018 1.138264133 1.413009472 1 9.952019829 -6.213496465 24.92895312 1.066034426 1.266779943 0.31494815 0.14150761 513.8168308 267169.7999 0.04500399 0.058099744 6.12E-07 6.213496465 0.200745517 VDATEESDLAQQYGVR ddPTM_A459_MK2206_30min_R1 1 VDATEESDLAQQYGVR 16 0 P07237;H7BZ94;I3NI03;I3L3U6 P07237 P4HB Protein disulfide-isomerase 0 161.87 0.0006032 5417400 1033.8 1110 844.75 841.33 1088.3 823.7 784.14 863.48 764.18 781.26 FALSE TRUE 945.8698813 1037.738798 787.4107236 906.1293824 1044.950706 870.3371822 731.8314513 855.9306854 843.6192456 878.048387 1.077241181 1.181869717 0.896773726 1.031981148 1.190083282 0.991217791 0.833475082 0.974810384 0.960789016 1 9.778156635 -6.993478589 24.98349579 0.936194756 1.071288655 0.346555941 0.086657252 190.2371379 728793.3553 0.031263112 0.027504069 1.02E-07 6.993478589 0.135093898 VDATEESDLAQQYGVR ddPTM_A459_MK2206_30min_R2 1 VDATEESDLAQQYGVR 16 0 P07237;H7BZ94;I3NI03;I3L3U6 P07237 P4HB Protein disulfide-isomerase 0 118.76 0.024055 2728700 9019.9 11379 12100 10023 15531 7146.1 11337 10203 10097 9759.1 FALSE TRUE 9710.470479 10813.93541 12503.40796 9204.088838 14921.1749 7418.049843 9848.438282 11536.56713 10975.21881 9440.661366 1.028579472 1.145463754 1.324420766 0.974941106 1.580522203 0.785755315 1.043193681 1.222008362 1.162547663 1 13.20467222 -6.796053029 24.99994165 1.056607753 1.200368792 0.161611699 0.189361022 410.2502062 296303.1577 0.065895604 0.058116907 1.60E-07 6.796053029 0.143761039 VDCDQHSDIAQR ddPTM_A459_MK2206_30min_R1 1 VDCDQHSDIAQR 12 0 Q9BS26 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 0 106.79 0.012302 4908800 3435.8 3476.3 3744.5 3671.1 4441 3120.8 3706.7 3700.1 3794.4 3111.9 FALSE TRUE 3143.567168 3249.992238 3490.333773 3953.848758 4264.105566 3297.496999 3459.432806 3667.750416 4188.841458 3497.425666 0.898823154 0.929252699 0.997972253 1.130502586 1.219212636 0.942835478 0.989136907 1.048700034 1.197692777 1 11.77207768 -5.434589307 3.099494457 1.074043968 0.91303953 0.368347024 0.084346492 0.293834071 5.372422455 0.024563589 0.057298688 3.68E-06 5.434589307 -0.161004439 VDCTAHSDVCSAQGVR ddPTM_A459_MK2206_30min_R1 1 VDCTAHSDVCSAQGVR 16 0 Q8NBS9-2;Q8NBS9 Q8NBS9-2 TXNDC5 Thioredoxin domain-containing protein 5 0 131.86 0.00093787 3836800 1272.3 1308.9 1443 1058.3 1704.6 1282.9 1415.2 1533.6 1115.8 968.25 FALSE TRUE 1164.084204 1223.690372 1345.05318 1139.810449 1636.702172 1355.536689 1320.79459 1520.191897 1231.791403 1088.20412 1.069729642 1.124504447 1.236030222 1.047423391 1.504039676 1.245663993 1.213737906 1.396973113 1.131948851 1 10.08773348 -5.353049427 1.179169658 1.254608848 1.067124789 0.097722557 0.142577851 1.375882944 2.969158647 0.045425276 0.248849418 4.44E-06 5.353049427 -0.187484059 VDDDS(ph)LGEFPVTNSR ddPTM_A459_MK2206_30min_R1 3 VDDDSLGEFPVTNSR 15 0 J3KMZ8;Q92785-2;Q92785 J3KMZ8 DPF2 Zinc finger protein ubi-d4 1 VDDDS(1)LGEFPVTNSR;VDDDS(1)LGEFPVTNSR;VDDDS(1)LGEFPVTNSR 195.15 3.33E-05 36318600 7132.02 7196.58 8704.9 7221.72 7720.47 6694.24 7797.38 6976.59 6104.32 5564.23 TRUE FALSE 6525.404247 6728.081334 8114.035641 7777.938126 7412.947332 7073.262084 7277.231007 6915.594409 6738.885909 6253.56882 1.043468847 1.075878675 1.297504813 1.243759899 1.185394699 1.131076076 1.16369248 1.105863645 1.07760642 1 12.61046403 -8.330055313 1.005570911 1.002073765 1.171138271 0.359050966 0.06969745 0.609523028 1.309582666 0.072491084 0.024753199 4.68E-09 8.330055313 0.169064506 VDDDS(ph)LGEFPVTNSR ddPTM_A459_MK2206_30min_R2 8 VDDDSLGEFPVTNSR 15 0 J3KMZ8;Q92785-2;Q92785 J3KMZ8 DPF2 Zinc finger protein ubi-d4 1 VDDDS(1)LGEFPVTNSR;VDDDS(0.994)LGEFPVT(0.006)NSR;VDDDS(1)LGEFPVTNSR;VDDDS(1)LGEFPVTNSR;VDDDS(0.992)LGEFPVT(0.007)NS(0.001)R;VDDDS(1)LGEFPVTNSR;VDDDS(1)LGEFPVTNSR;VDDDS(0.998)LGEFPVT(0.002)NSR 177.66 1.96E-05 16106300 79175.8 105399 98083.2 115532.8 105497.8 110281.7 106311.9 81953.2 90121.4 90584.5 TRUE FALSE 85237.56012 100165.0389 101353.2449 106093.4007 101355.4263 114478.5474 92353.01983 92664.76463 97959.99647 87628.73518 0.972712432 1.143061562 1.15662111 1.210714732 1.156646003 1.306404196 1.053912505 1.057470069 1.117898099 1 16.41911642 VDDKPS(ph)SPGDSSK ddPTM_A459_MK2206_30min_R1 4 VDDKPSSPGDSSK 13 1 Q9HC52;C9JM54;C9J6K3 Q9HC52 CBX8 Chromobox protein homolog 8 1 VDDKPS(0.782)S(0.218)PGDSSK;VDDKPS(0.583)S(0.389)PGDS(0.022)S(0.005)K;VDDKPS(0.496)S(0.496)PGDS(0.007)S(0.001)K;VDDKPS(0.592)S(0.399)PGDS(0.005)S(0.004)K 81.526 0.019182 259086000 43965.4 52242.5 48777.7 46776.4 30361.9 26405.2 33474.1 37953.9 26147 36463 TRUE FALSE 40225.91186 48841.50375 45466.80563 50379.12643 29152.52123 27900.23961 31241.10387 37622.07305 28865.07422 40980.31172 0.981591163 1.191828507 1.109479253 1.229349517 0.711378709 0.68082058 0.762344222 0.918052388 0.704364438 1 15.32264334 -6.263932404 24.99999095 0.784604903 1.131289511 0.681021916 0.111102053 122.2440917 1225859.154 0.033079613 0.039273284 5.45E-07 6.263932404 0.346684608 VDDKPS(ph)SPGDSSK ddPTM_A459_MK2206_30min_R2 1 VDDKPSSPGDSSK 13 1 Q9HC52;C9JM54;C9J6K3 Q9HC52 CBX8 Chromobox protein homolog 8 1 VDDKPS(0.626)S(0.373)PGDS(0.001)SK 81.713 0.018974 138460000 153690 142690 141390 126040 132720 71601 173400 119440 85027 126710 TRUE FALSE 165456.6246 135604.2221 146103.872 115742.1288 127508.7459 74325.82623 150632.3717 135051.2181 92422.49477 122575.4631 1.349834791 1.106291738 1.191950398 0.944252022 1.040246904 0.606367901 1.228894984 1.101780199 0.754004859 1 16.90331069 -5.053309478 0.944247324 0.95540542 1.413842203 0.331505014 0.172086906 1.819837926 1.717251201 0.061402377 0.781808034 8.84E-06 5.053309478 0.458436784 VDDKPSS(ph)PGDSSK ddPTM_A459_MK2206_30min_R2 3 VDDKPSSPGDSSK 13 1 Q9HC52;C9JM54;C9J6K3 Q9HC52 CBX8 Chromobox protein homolog 8 1 VDDKPS(0.022)S(0.883)PGDS(0.092)S(0.003)K;VDDKPS(0.025)S(0.975)PGDSSK;VDDKPS(0.031)S(0.957)PGDS(0.009)S(0.003)K 200 0.00057891 146391000 222856 200468 216852 183862 184909 104126 263986 188936 135143 210973 TRUE FALSE 239918.0267 190513.0506 224081.7374 168839.8865 177648.5436 108088.5879 229324.3211 213630.5839 146897.4939 204088.9683 1.175556076 0.933480394 1.097961048 0.827285707 0.870446576 0.529615044 1.123648784 1.046752236 0.719771848 1 17.63883868 -5.761062289 24.99999765 0.871792626 1.055447317 0.218470396 0.168454002 16.90500406 1120572.504 0.047558968 0.076286731 1.73E-06 5.761062289 0.183654691 VDDLSSSPT(ph)SSPER ddPTM_A459_MK2206_30min_R2 1 VDDLSSSPTSSPER 14 0 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 VDDLS(0.04)S(0.254)S(0.254)PT(0.377)S(0.071)S(0.003)PER 113.54 0.0076306 3866600 8817 11400 13517 12765 16047 15222 15057 13507 12784 10369 TRUE FALSE 9492.036299 10833.89258 13967.65003 11722.05867 15416.91415 15801.28388 13079.99781 15272.41128 13895.92921 10030.66038 0.946302231 1.080077699 1.392495559 1.168622825 1.536978979 1.575298463 1.304001663 1.522572862 1.3853454 1 13.29212897 -4.969000689 1.157600769 1.402145856 0.797104166 0.39593354 0.16979844 1.069946777 1.512954351 0.051236133 0.726899315 1.07E-05 4.969000689 -0.60504169 VDDS(ph)PSTSGGSSDGDQR ddPTM_A459_MK2206_30min_R1 2 VDDSPSTSGGSSDGDQR 17 0 F8WF15;F8W8F0;C9J180;Q96LR5 F8WF15 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 VDDS(0.98)PS(0.01)T(0.01)SGGSSDGDQR;VDDS(0.962)PS(0.035)T(0.001)S(0.001)GGSSDGDQR 199.61 6.00E-08 6299000 3281.4 3350.9 3730.2 2826.8 3062 3071.1 3541.5 2794.9 4114.2 4200 TRUE FALSE 3002.299699 3132.755801 3477.004417 3044.520626 2940.034056 3244.983028 3305.252997 2770.464484 4541.885813 4720.327708 0.636036285 0.663673371 0.736602336 0.644980775 0.622845327 0.687448675 0.70021685 0.586922065 0.962197138 1 12.20467131 -8.272684535 23.81005905 0.981098779 0.663064815 0.908762187 0.040706773 113.9121232 241188.3489 0.037488337 0.010079399 5.34E-09 8.272684535 -0.318033964 VDDS(ph)PSTSGGSSDGDQR ddPTM_A459_MK2206_30min_R2 1 VDDSPSTSGGSSDGDQR 17 0 F8WF15;F8W8F0;C9J180;Q96LR5 F8WF15 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 VDDS(0.98)PS(0.02)TSGGSSDGDQR 193.31 8.58E-08 6660500 6505.7 6627.9 6797 7966.2 6740.1 6789.3 7272.3 7342.1 5282.7 7231 TRUE FALSE 7003.781394 6298.768124 7023.608588 7315.335977 6475.449808 7047.671569 6317.438274 8301.737679 5742.179697 6995.053062 1.001247786 0.900460378 1.004082246 1.04578706 0.925718468 1.007522246 0.903129429 1.186801244 0.820891514 1 12.77211929 -5.318920568 24.98829592 0.991098402 0.950853089 0.021260869 0.093739284 1009.172728 438707.2086 0.022724702 0.047305265 4.80E-06 5.318920568 -0.040245313 VDDSPS(ph)TSGGSSDGDQRESVQQEPER ddPTM_A459_MK2206_30min_R2 1 VDDSPSTSGGSSDGDQRESVQQEPER 26 1 F8WF15;F8W8F0;C9J180;Q96LR5 F8WF15 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 VDDS(0.006)PS(0.285)T(0.07)S(0.252)GGS(0.194)S(0.194)DGDQRESVQQEPER 74 0.0096712 0 3636.5 9644.1 5296.8 7428.9 7176.7 8576.3 8202.6 5887.6 5632.5 6294 TRUE FALSE 3914.913236 9165.188018 5473.392668 6821.935106 6894.906698 8902.677106 7125.588767 6657.129535 6122.404669 6088.627295 0.642987827 1.50529628 0.898953476 1.120438939 1.132423839 1.462181322 1.170311208 1.093371168 1.005547617 1 12.57190129 -4.732910667 24.99808448 1.157601583 0.642984921 0.412595169 0.182980892 3409.271569 2987189.261 0.044544938 4.747026328 1.85E-05 4.732910667 -0.514616662 VDDSPSTSGGS(ph)SDGDQR ddPTM_A459_MK2206_30min_R1 1 VDDSPSTSGGSSDGDQR 17 0 F8WF15;F8W8F0;C9J180;Q96LR5 F8WF15 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 VDDSPSTSGGS(0.5)S(0.5)DGDQR 314.68 1.53E-103 15966000 2990.9 3103 3177.9 2519.8 2682.6 2805.8 3383 2724.5 3212.9 3506.7 TRUE FALSE 2736.508249 2900.994136 2962.193002 2713.875433 2575.746362 2964.661971 3157.326243 2700.679984 3546.892452 3941.13647 0.694344961 0.73608061 0.751608838 0.688602248 0.653554217 0.752235299 0.80112076 0.685254115 0.899966921 1 11.94439599 -8.437685168 3.377607382 0.998520426 0.722423563 0.839792265 0.041115133 0.084631743 1.846218508 0.041328378 0.010977224 3.65E-09 8.437685168 -0.276096863 VDDSPSTSGGS(ph)SDGDQRESVQQEPER ddPTM_A459_MK2206_30min_R2 1 VDDSPSTSGGSSDGDQRESVQQEPER 26 1 F8WF15;F8W8F0;C9J180;Q96LR5 F8WF15 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 VDDS(0.005)PS(0.043)T(0.124)S(0.124)GGS(0.371)S(0.332)DGDQRESVQQEPER 71.159 0.00038298 6570200 5965.5 9840.1 6250.6 9465.1 9026.3 7591 9437.9 8125.2 7244.7 5380 TRUE FALSE 6422.223267 9351.454943 6458.991884 8691.771053 8671.882108 7879.880824 8198.692393 9187.191538 7874.830911 5204.451041 1.233986681 1.796818698 1.241051522 1.670064909 1.666243383 1.514065703 1.575323186 1.765256598 1.513095396 1 12.34553028 -8.571253155 20.29959757 0.999999995 1.566573471 0.453791619 0.182358042 2313.915767 970999.6337 0.164129405 0.04237803 2.68E-09 8.571253155 0.566573476 VDDSPSTSGGSS(ph)DGDQR ddPTM_A459_MK2206_30min_R1 1 VDDSPSTSGGSSDGDQR 17 0 F8WF15;F8W8F0;C9J180;Q96LR5 F8WF15 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 VDDSPSTSGGS(0.227)S(0.773)DGDQR 314.68 1.53E-103 7511100 2139.2 2158.5 2539.6 1531.2 1730.3 2276.1 2855.5 1686.8 2603.7 2559.3 TRUE FALSE 1957.249807 2017.981258 2367.219028 1649.133289 1661.378487 2404.970815 2665.014805 1672.052485 2874.363932 2876.365406 0.680459375 0.701573331 0.822989674 0.573339286 0.577596464 0.836114497 0.926521644 0.581307397 0.999304166 1 11.49003125 -6.83952091 8.91495165 0.84691306 0.676047408 0.363909961 0.128887446 0.385161941 39.99295034 0.044944856 0.039668233 1.45E-07 6.83952091 -0.170865653 VDDSPSTSGGSS(ph)DGDQR ddPTM_A459_MK2206_30min_R2 1 VDDSPSTSGGSSDGDQR 17 0 F8WF15;F8W8F0;C9J180;Q96LR5 F8WF15 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 VDDSPSTSGGS(0.139)S(0.861)DGDQR 218.83 7.84E-12 26518000 21903 23721 19283 16830 20617 23067 26064 16794 15083 20811 TRUE FALSE 23579.91052 22543.04963 19925.8856 15454.93516 19807.47299 23944.83085 22641.76549 18989.03346 16394.89208 20131.93877 1.171268738 1.119765458 0.989764862 0.767682404 0.983883033 1.189395175 1.124668903 0.943229248 0.81437224 1 14.29719849 -5.201531064 3.936339934 0.979918361 1.156439617 0.250191026 0.118102679 0.362499868 11.34032443 0.034305933 0.100347499 6.29E-06 5.201531064 0.176521256 VDDSSGS(ph)IGRR ddPTM_A459_MK2206_30min_R1 1 VDDSSGSIGRR 11 1 P41250 P41250 GARS Glycine--tRNA ligase 1 VDDS(0.104)S(0.104)GS(0.792)IGRR 98.105 0.041724 0 2321.3 2452.1 2398 2540.8 3139.3 2698.5 2431.8 2809 1979.7 1613.5 TRUE FALSE 2123.861245 2292.467844 2235.230441 2736.492856 3014.255033 2851.286738 2269.579059 2784.441209 2185.496899 1813.392561 1.171208756 1.264187299 1.232623586 1.509046036 1.662218704 1.572349418 1.25156522 1.535487279 1.205197896 1 10.82447556 -8.525300755 5.043298396 1.000258645 1.402135714 0.393554533 0.158060813 0.161614947 16.82315788 0.166643866 0.043340471 2.98E-09 8.525300755 0.401877069 VDDSTGTVIS(ph)DVEEDAGELSR ddPTM_A459_MK2206_30min_R1 4 VDDSTGTVISDVEEDAGELSR 21 0 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 VDDST(0.004)GTVIS(0.996)DVEEDAGELSR;VDDSTGTVIS(1)DVEEDAGELSR;VDDSTGTVIS(1)DVEEDAGELSR;VDDST(0.007)GT(0.002)VIS(0.99)DVEEDAGELSR 211.67 6.21E-18 10726100 2177.05 2228.09 1994.64 1483.85 2352.22 1690.43 1862.29 1571.08 1873.32 1574.2 TRUE FALSE 1991.880465 2083.040936 1859.249394 1598.136384 2258.526096 1786.140686 1738.060032 1557.344213 2068.058318 1769.223781 1.125849928 1.177375615 1.050884243 0.903298046 1.276563271 1.009561767 0.982385638 0.880241511 1.168907145 1 10.78890082 -6.964635985 24.99994657 0.997627601 1.100979824 0.162439937 0.110555941 323.8326052 228926.7059 0.038773455 0.034194861 1.08E-07 6.964635985 0.103352223 VDDSTGTVIS(ph)DVEEDAGELSR ddPTM_A459_MK2206_30min_R2 2 VDDSTGTVISDVEEDAGELSR 21 0 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 VDDS(0.156)T(0.118)GT(0.01)VIS(0.716)DVEEDAGELSR;VDDS(0.192)T(0.192)GT(0.059)VIS(0.557)DVEEDAGELSR 130.47 5.28E-05 2369000 7020.23 8404.3 9640 9238.8 8145 8674 9886.7 6288.1 7921 6504 TRUE FALSE 7557.704206 7986.954683 9961.392789 8483.960487 7825.186375 9004.095148 8588.564414 7109.97626 8609.954262 6291.775013 1.201203824 1.269427891 1.583240464 1.34842083 1.243716814 1.431089816 1.365046334 1.130042992 1.368445986 1 12.61925137 -9.523325212 0.500312898 0.966855972 1.3531133 0.399731064 0.120293218 4.367468576 1.355458777 0.424168554 0.062070983 3.00E-10 9.523325212 0.386257328 VDEDSAEDTQS(ph)NDGK ddPTM_A459_MK2206_30min_R2 2 VDEDSAEDTQSNDGK 15 0 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 VDEDSAEDTQS(1)NDGK;VDEDSAEDTQS(1)NDGK 199.61 3.79E-21 4991200 99398 44911 58535 45201 38826 32343 66116 53521 26249.2 74155 TRUE FALSE 107007.9873 42680.78505 60486.52768 41507.93371 37301.49616 33573.83553 57434.88978 60516.37847 28532.30797 71735.32842 1.491705547 0.594975809 0.843190225 0.578626105 0.519987808 0.468023724 0.800649987 0.843606348 0.39774416 1 16.13039618 -4.758610407 24.98919222 0.662327986 1.491706668 0.641030487 0.183926686 47.43746153 418951.2937 0.044348839 0.299612339 1.74E-05 4.758610407 0.829378681 VDEDSAEDTQS(ph)NDGKEVVEVGQK ddPTM_A459_MK2206_30min_R2 2 VDEDSAEDTQSNDGKEVVEVGQK 23 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 VDEDS(0.006)AEDT(0.242)QS(0.751)NDGKEVVEVGQK;VDEDS(0.004)AEDT(0.399)QS(0.597)NDGKEVVEVGQK 97.771 3.50E-05 23245000 87926 66972 78082 62846 57349 42520 81148 61306 43811 87033 TRUE FALSE 94657.68216 63646.26787 80685.21491 57711.28077 55097.1901 44138.1284 70493.17012 69318.90469 47621.60159 84193.12034 1.124292362 0.755955684 0.958335011 0.685463142 0.654414397 0.524248635 0.837279458 0.823332173 0.565623431 1 16.36141473 -1.522880591 0.888399295 0.725152366 175.8777125 0.349269001 0.148501194 904.3902933 2.109314805 0.048509146 320942.0609 0.029999872 1.522880591 175.1525601 VDEFPLCGHMVSDEYEQLSSEALEAAR ddPTM_A459_MK2206_30min_R1 1 VDEFPLCGHMVSDEYEQLSSEALEAAR 27 0 X1WI28;P27635;B8A6G2;A6QRI9 X1WI28 RPL10 60S ribosomal protein L10 0 93.876 0.00012495 2136600 670.09 629.08 617.65 601.2 493.41 593.66 496.56 510.03 473.31 383.5 FALSE TRUE 613.0953267 588.1267777 575.7256389 647.5045282 473.7564349 627.2725162 463.4353884 505.5708615 522.5122683 431.0108753 1.422459065 1.364528859 1.335756641 1.502292785 1.09917513 1.455351946 1.075228991 1.172988642 1.212294859 1 8.751580462 -7.418185669 0.297100266 0.98309317 1.472340232 0.521001678 0.115233136 1.410535044 0.373505958 0.181319832 0.251680627 3.82E-08 7.418185669 0.489247062 VDEGAGDSAAVASGGAQT(ph)LALAGSPAPSGHPK ddPTM_A459_MK2206_30min_R2 1 VDEGAGDSAAVASGGAQTLALAGSPAPSGHPK 32 0 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 VDEGAGDSAAVAS(0.005)GGAQT(0.818)LALAGS(0.176)PAPS(0.001)GHPK 103.14 2.48E-09 9948100 33496 41445 37905 47645 44893 45511 42105 35242 40458 41068 TRUE FALSE 36060.47951 39386.90157 39168.73378 43752.25109 43130.27525 47242.953 36576.56292 39848.2504 43976.96371 39727.95452 0.90768528 0.99141529 0.985923747 1.101296345 1.085640471 1.189161475 0.920675715 1.003027991 1.106952629 1 15.27786689 -5.09434539 1.506284387 1.057072077 0.902853293 0.288602719 0.071268762 0.893531698 2.845821002 0.02184479 0.172849528 8.05E-06 5.09434539 -0.154218784 VDEGAGDSAAVASGGAQTLALAGS(ph)PAPSGHPK ddPTM_A459_MK2206_30min_R1 1 VDEGAGDSAAVASGGAQTLALAGSPAPSGHPK 32 0 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 VDEGAGDSAAVASGGAQTLALAGS(0.984)PAPS(0.016)GHPK 181.3 8.81E-35 7416700 1206.6 845.41 1014.7 850.35 1153 927.48 911.38 1065.1 763.92 726.41 TRUE FALSE 1103.972334 790.3736553 945.8249911 915.8441043 1107.073568 979.9931161 850.5835031 1055.787943 843.3322177 816.4031549 1.352239181 0.968116856 1.158526869 1.12180373 1.356037837 1.200378894 1.041866997 1.293218842 1.032985006 1 9.673137947 -8.430258433 7.103639439 1.000445914 1.177228475 0.244844283 0.119205683 0.340707645 21.03001068 0.111481633 0.028842874 3.71E-09 8.430258433 0.176782561 VDEGAGDSAAVASGGAQTLALAGS(ph)PAPSGHPK ddPTM_A459_MK2206_30min_R2 1 VDEGAGDSAAVASGGAQTLALAGSPAPSGHPK 32 0 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 VDEGAGDSAAVASGGAQT(0.003)LALAGS(0.956)PAPS(0.041)GHPK 105.44 7.61E-12 7062500 28487 32061 30351 41255 39734 29208 36999 31648 32510 34063 TRUE FALSE 30667.98662 30468.89736 31362.88719 37884.33453 38173.84351 30319.53091 32140.98686 35784.50226 35337.66104 32951.5271 0.930700011 0.924658128 0.95178858 1.149698902 1.158484807 0.920125213 0.975402043 1.085974017 1.072413455 1 15.00805771 -5.57356516 13.11660171 1.051099763 0.93031114 0.371462248 0.069607224 1.272873457 327.8431739 0.020581802 0.035656644 2.67E-06 5.57356516 -0.120788623 VDENENCSSLGS(ph)PSEPPQTLDLVR ddPTM_A459_MK2206_30min_R1 1 VDENENCSSLGSPSEPPQTLDLVR 24 0 A0A0C4DGQ6;Q96P16-3;Q96P16 A0A0C4DGQ6 RPRD1A Regulation of nuclear pre-mRNA domain-containing protein 1A 1 VDENENCSSLGS(0.999)PS(0.001)EPPQTLDLVR 175.23 1.30E-17 5420900 935.16 976.29 1202.1 697.18 865.66 815.15 914.78 749.41 955.78 1105.4 TRUE FALSE 855.6197313 912.7333436 1120.504801 750.8769244 831.1789291 861.3030886 853.7566953 742.8579874 1055.136751 1242.345297 0.688713301 0.734685715 0.901927028 0.604402758 0.669040186 0.693288002 0.687213689 0.597948082 0.849310376 1 10.2788505 -8.523391263 5.234061321 0.999816611 0.701334807 0.59844971 0.07938125 0.099154082 11.70232499 0.079170795 0.020572819 3.00E-09 8.523391263 -0.298481804 VDENENCSSLGS(ph)PSEPPQTLDLVR ddPTM_A459_MK2206_30min_R2 1 VDENENCSSLGSPSEPPQTLDLVR 24 0 A0A0C4DGQ6;Q96P16-3;Q96P16 A0A0C4DGQ6 RPRD1A Regulation of nuclear pre-mRNA domain-containing protein 1A 1 VDENENCS(0.013)S(0.032)LGS(0.689)PS(0.241)EPPQT(0.026)LDLVR 45.735 0.045235 2884200 4640.3 5978.3 5385.7 5927.3 5775.9 4862.8 5730.9 5065.1 4463.3 4952.9 TRUE FALSE 4995.564936 5681.426315 5565.25655 5443.02063 5549.109144 5047.857262 4978.425946 5727.125961 4851.509766 4791.287279 1.042635235 1.185782856 1.161536812 1.136024687 1.158166652 1.05354928 1.039058119 1.195320929 1.012569167 1 12.2261976 -6.761363369 25 1.070991966 1.140876842 0.271657487 0.061361287 3.075694126 1011544.982 0.020353045 0.019136392 1.73E-07 6.761363369 0.069884876 VDENMTAS(ph)TYSLNKIPER ddPTM_A459_MK2206_30min_R1 1 VDENMTASTYSLNKIPER 18 1 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4;J3KRP9 Q9HCD6 TANC2 Protein TANC2 1 VDENMTAS(0.865)T(0.029)YS(0.105)LNKIPER 93.851 0.0024517 6965300 1922.9 1992.1 1873.5 2028.2 1847.2 2029.7 2061.5 1739.5 1893.5 1660.7 TRUE FALSE 1759.347257 1862.413928 1746.33204 2184.412315 1773.622112 2144.61986 1923.981096 1724.291735 2090.336101 1866.440054 0.942621893 0.997842885 0.935648609 1.170362965 0.950270066 1.14904299 1.030829301 0.923839869 1.119958874 1 10.86607346 VDFGS(ph)SER ddPTM_A459_MK2206_30min_R2 1 VDFGSSER 8 0 A0A0C4DGE6;E9PNT2;E9PIR1;A0A0G2JRG8;A0A0G2JNY3;Q6ZUM4-2;Q6ZUM4-3;Q6ZUM4 A0A0C4DGE6 ARHGAP27 Rho GTPase-activating protein 27 1 VDFGS(0.835)S(0.165)ER 99.568 0.018546 7643300 33877 30689 29704 31955 29787 31677 36046 31258 31514 38765 TRUE FALSE 36470.64917 29165.02889 30694.31653 29344.17428 28617.41271 32882.49043 31313.1169 35343.52792 34255.03076 37500.10122 0.972548019 0.777732004 0.818512898 0.782509202 0.763128946 0.876864045 0.835014197 0.942491534 0.913465021 1 15.19460687 -7.974214613 1.037793009 0.985498097 0.820450387 0.457379797 0.059862205 0.441576831 0.876386417 0.053739226 0.019760549 1.06E-08 7.974214613 -0.165047711 VDFGSS(ph)ER ddPTM_A459_MK2206_30min_R1 2 VDFGSSER 8 0 A0A0C4DGE6;E9PNT2;E9PIR1;A0A0G2JRG8;A0A0G2JNY3;Q6ZUM4-2;Q6ZUM4-3;Q6ZUM4 A0A0C4DGE6 ARHGAP27 Rho GTPase-activating protein 27 1 VDFGS(0.249)S(0.751)ER;VDFGS(0.268)S(0.732)ER 101.46 0.017015 11188800 5415.5 5631.5 5256.2 4242.5 4942.3 5109.4 6583.3 4801.3 5753.9 5365.7 TRUE FALSE 4954.883287 5264.888326 4899.423789 4569.258085 4745.437726 5398.689813 6144.140069 4759.32274 6352.038496 6030.443425 0.821644934 0.873051608 0.812448346 0.757698524 0.786913564 0.895239277 1.018853778 0.78921605 1.053328594 1 12.55804837 -6.940766879 4.682846201 0.949236242 0.811840691 0.504795598 0.071705576 0.187632298 8.41212082 0.025418236 0.022039678 1.15E-07 6.940766879 -0.137395552 VDGETAS(ph)DSESR ddPTM_A459_MK2206_30min_R2 2 VDGETASDSESR 12 0 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VDGET(0.005)AS(0.498)DS(0.498)ESR;VDGET(0.042)AS(0.586)DS(0.371)ES(0.001)R 141.34 0.00099971 4782500 51084 16194.9 20215.3 19872.5 12132.3 20719.5 42217 16651.9 15806.1 22493.6 TRUE FALSE 54995.03032 15390.68482 20889.26801 18248.85318 11655.92494 21507.99509 36673.85719 18828.3605 17180.88601 21759.63567 2.527387459 0.707304343 0.960000816 0.838656191 0.535667284 0.988435441 1.685407685 0.865288408 0.789575996 1 14.40936678 -4.756385598 24.99967157 0.937014468 2.527389912 0.737396129 0.28594336 86.45909997 427641.3064 0.075881549 0.617176257 1.75E-05 4.756385598 1.590375443 VDGETASDS(ph)ESR ddPTM_A459_MK2206_30min_R1 1 VDGETASDSESR 12 0 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VDGET(0.002)AS(0.259)DS(0.739)ESR 142.76 0.0008817 1612900 680.27 608.63 441.3 380.26 511.02 559.78 600.7 578.63 883.82 1065.5 TRUE FALSE 622.4094643 569.0080764 411.3457855 409.5476911 490.6649913 591.4742598 560.628399 573.5710989 975.6962518 1197.502184 0.519756433 0.475162454 0.343503161 0.342001623 0.409740373 0.493923324 0.468164824 0.478972904 0.814776177 1 10.22581257 -8.375382239 2.111532799 1.001031069 0.430151424 0.920682683 0.056130136 0.082351722 0.73359278 0.059562333 0.016829961 4.21E-09 8.375382239 -0.570879644 VDGETASDS(ph)ESRAESAPLPVSADDTPEVLNR ddPTM_A459_MK2206_30min_R1 1 VDGETASDSESRAESAPLPVSADDTPEVLNR 31 1 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VDGET(0.025)AS(0.153)DS(0.411)ES(0.132)RAES(0.178)APLPVS(0.085)ADDT(0.017)PEVLNR 60.912 0.00085406 8646900 516.1 612.68 437.99 481.2 1023.5 643.67 848.76 734.16 608.57 416.28 TRUE FALSE 472.2029849 572.7944206 408.2604591 518.2621074 982.7318277 680.1140392 792.1407691 727.7413165 671.8330293 467.8519092 1.009300113 1.224307114 0.872627537 1.107748194 2.100519007 1.453695124 1.693144248 1.555495024 1.435995058 1 8.86990813 -6.034738319 24.79966492 1.573961327 1.043615505 0.440146438 0.267918403 453.188343 323530.1542 0.074479409 0.096204912 9.23E-07 6.034738319 -0.530345822 VDGIPNDS(ph)SDSEMEDK ddPTM_A459_MK2206_30min_R2 2 VDGIPNDSSDSEMEDK 16 0 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 VDGIPNDS(0.417)S(0.417)DS(0.166)EMEDK;VDGIPNDS(0.486)S(0.486)DS(0.029)EMEDK 166.77 1.18E-05 0 29544.5 27905.3 26843.7 29784.1 25870.6 22543.6 33587.4 24085.7 20936 28246.2 TRUE FALSE 31806.44964 26519.56338 27738.65556 27350.64376 24854.79025 23401.5125 29177.33403 27233.78369 22756.97544 27324.52881 1.164025549 0.970540556 1.015155861 1.000955733 0.909614597 0.856428766 1.067807399 0.996678987 0.832840544 1 14.737909 -1.699469759 1.060110727 0.954394552 199.9999988 0.428023387 0.070085979 1575.504671 2.414583214 0.021636004 761763.0305 0.019976999 1.699469759 199.0456042 VDGIPNDSS(ph)DSEMEDK ddPTM_A459_MK2206_30min_R1 4 VDGIPNDSSDSEMEDK 16 0 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 VDGIPNDS(0.176)S(0.732)DS(0.092)EMEDK;VDGIPNDS(0.227)S(0.765)DS(0.008)EMEDK;VDGIPNDS(0.217)S(0.717)DS(0.066)EMEDK;VDGIPNDS(0.129)S(0.435)DS(0.435)EMEDK 192.23 8.39E-07 21866100 10002.5 10442.5 10868.1 7335.8 7359.1 7525.9 10014 8164.5 10903.5 13070.1 TRUE FALSE 9151.73485 9762.691352 10130.40365 7900.804587 7065.971464 7952.009954 9345.984332 8093.118637 12036.95784 14689.32266 0.623019527 0.664611404 0.689644028 0.537860374 0.481027725 0.541346265 0.636243382 0.550952472 0.819435866 1 13.84248025 -8.479161759 3.06087224 0.998506954 0.590863152 0.822301775 0.062019655 0.098913787 2.060495531 0.06689489 0.017860426 3.32E-09 8.479161759 -0.407643802 VDGIPNDSSDS(ph)EMEDK ddPTM_A459_MK2206_30min_R2 1 VDGIPNDSSDSEMEDK 16 0 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 VDGIPNDS(0.281)S(0.281)DS(0.437)EMEDK 106.36 0.046507 0 31121 29901 27543 27371 26645 18604 30632 21003 18448 27792 TRUE FALSE 33503.64769 28416.15982 28461.26987 25134.70174 25598.78342 19311.98826 26609.9816 23748.16421 20052.57369 26885.14932 1.246176738 1.056946327 1.058624207 0.934891655 0.952153292 0.718314339 0.989765067 0.883319037 0.745860603 1 14.71452186 -4.812522967 0.681949883 0.866230734 1.443030965 0.614442435 0.090904345 1.99432094 0.721796727 0.039677366 0.890677071 1.54E-05 4.812522967 0.576800231 VDHGAEIITQS(ph)PGR ddPTM_A459_MK2206_30min_R1 1 VDHGAEIITQSPGR 14 0 A0A669KB77;P11137-2;P11137-4;P11137-3;P11137 A0A669KB77 MAP2 Microtubule-associated protein 2 1 VDHGAEIIT(0.286)QS(0.714)PGR 77.899 0.025938 5386400 2838.9 2403.8 2783.7 2409.8 2848.7 2801.2 2994.5 2198.2 2966 2779.9 TRUE FALSE 2597.436647 2247.312183 2594.7502 2595.403214 2735.230247 2959.801523 2794.742369 2178.981369 3274.326314 3124.294999 0.831367284 0.719302173 0.830507427 0.830716438 0.875471185 0.94735021 0.894519362 0.697431379 1.048020854 1 11.60931497 -1.522878746 0.051252268 1.278361826 0.074580903 0.335267384 0.086371704 572.1278231 2.219200731 12.06381595 54.05563381 0.03 1.522878746 -1.203780923 VDHGAEIITQS(ph)PGR ddPTM_A459_MK2206_30min_R2 2 VDHGAEIITQSPGR 14 0 A0A669KB77;P11137-2;P11137-4;P11137-3;P11137 A0A669KB77 MAP2 Microtubule-associated protein 2 1 VDHGAEIIT(0.013)QS(0.987)PGR;VDHGAEIIT(0.193)QS(0.807)PGR 126.43 0.00085869 46969000 186179 200321 185212 231482 178770 163873 229258 190013 167019 192155 TRUE FALSE 200433.0074 190373.3504 191386.8756 212569.1801 171750.5916 170109.3018 199156.1492 214848.3515 181546.0107 185884.9981 1.078263493 1.024145856 1.029598287 1.143552101 0.923961553 0.915131956 1.071394417 1.155813292 0.976657679 1 17.50405082 -10.80385893 14.7376788 1.000000823 1.035857451 0.018462742 0.077346609 0 0 0.077932082 0.018901306 1.57E-11 10.80385893 0.035856629 VDIDAPDVDVHGPDWHLK ddPTM_A459_MK2206_30min_R1 3 VDIDAPDVDVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ;; 139.6 0.00018333 40014500 12587.6 13020.8 11736.4 12042.7 12626.1 12430.4 12928.2 12709.2 11219 11173 FALSE TRUE 11516.95852 12173.14355 10939.76587 12970.23084 12123.1757 13134.19851 12065.78337 12598.0848 12385.2552 12557.19559 0.917160081 0.96941578 0.871194988 1.032892316 0.965436559 1.045949982 0.960866085 1.003256238 0.986307421 1 13.61622668 -5.770309454 24.99971907 0.99831811 0.924272827 0.547764534 0.033204278 138.2385127 389616.7172 0.008701911 0.013124318 1.70E-06 5.770309454 -0.074045283 VDIDAPDVDVHGPDWHLK ddPTM_A459_MK2206_30min_R2 3 VDIDAPDVDVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ;; 96.435 0.0021202 28546100 132844 163739 164632 171441 179452 198046 194577 127635 180471 170433 FALSE TRUE 143014.6388 155607.9594 170120.7487 157433.7219 172405.8128 205582.7793 169028.8062 144317.3327 196168.0414 164871.7852 0.867429431 0.94381194 1.031836639 0.954885772 1.045696282 1.246925173 1.025213659 0.875330686 1.189821783 1 17.330985 -4.758802603 0.86309403 1.056544976 0.75458017 0.269829957 0.099569312 3.545629832 1.989541075 0.037328133 1.032473811 1.74E-05 4.758802603 -0.301964806 VDIDAPDVEVHDPDWHLK ddPTM_A459_MK2206_30min_R1 2 VDIDAPDVEVHDPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 155.26 1.50E-05 9130200 9833.2 10441.6 9982.1 10329.4 9357.3 9220.6 10178 9818.6 9003 8232.6 FALSE TRUE 8996.834704 9761.849942 9304.542864 11124.97218 8984.578927 9742.662404 9499.044191 9732.757015 9938.894068 9252.516641 0.972366228 1.055048083 1.005622927 1.202372566 0.971041639 1.052974318 1.026644378 1.051903757 1.074182782 1 13.17563011 -4.759591785 24.6215409 1.050935346 0.972366111 0.129592676 0.059259063 80.83969832 1076922.43 0.014067469 0.088149586 1.74E-05 4.759591785 -0.078569235 VDIDAPDVEVHDPDWHLK ddPTM_A459_MK2206_30min_R2 1 VDIDAPDVEVHDPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 136.57 0.00019758 2326000 10339 11734 10527 8917.5 12671 9094.7 13292 10796 11606 10748 FALSE TRUE 11130.56179 11151.30662 10877.96493 8188.911724 12173.47287 9440.805181 11546.74443 12207.07427 12615.4689 10397.29364 1.070524905 1.07252012 1.046230423 0.787600313 1.17083092 0.908006017 1.110552884 1.174062664 1.2133416 1 13.34392043 -7.499924247 20.24079422 1.144682997 1.01095314 0.205690132 0.110063443 94.95538199 83731.60228 0.04519387 0.030076667 3.16E-08 7.499924247 -0.133729858 VDIDT(ph)PDIDIHGPEGK ddPTM_A459_MK2206_30min_R1 2 VDIDTPDIDIHGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK 127.32 0.0014206 26151000 7930 6962.5 7052.8 5825.8 6484.4 5671.4 6482.7 5260.1 5979.3 7074.5 TRUE FALSE 7255.511858 6509.239985 6574.075586 6274.504125 6226.112617 5992.509767 6050.250911 5214.1115 6600.869632 7950.94247 0.91253482 0.818675271 0.826829726 0.789152248 0.783065988 0.753685464 0.76094764 0.655785339 0.830199647 1 12.95691017 -3.592471934 0.788998573 0.777856935 1.619408304 0.112795369 0.083083279 23.5131455 2.652657747 0.028507454 26.7529458 0.000255581 3.592471934 0.841551369 VDIDT(ph)PDIDIHGPEGK ddPTM_A459_MK2206_30min_R2 3 VDIDTPDIDIHGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK 102.59 0.0087529 9098400 128448 113231 134429 128146 139328 114105 146785 104841 111999 190468 TRUE FALSE 138282.0776 107608.1132 138910.7958 117676.0619 133857.2827 118447.3457 127511.9532 118544.0787 121740.4706 184253.0448 0.750500909 0.584023528 0.753913163 0.638665494 0.726486137 0.642851497 0.692048011 0.643376498 0.660724336 1 17.49132893 -10.61195482 4.962078243 1.000009505 0.675268619 0.778636312 0.051666829 5.01E-06 9.21E-07 0.044754128 0.010854143 2.44E-11 10.61195482 -0.324740886 VDIDT(ph)PDINIEGSEGK ddPTM_A459_MK2206_30min_R1 2 VDIDTPDINIEGSEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDIDT(1)PDINIEGSEGK;VDIDT(1)PDINIEGSEGK 160.64 0.0001859 3489200 3504.7 2809 3350.4 2979.6 3534.6 2569.2 3027.69 3065.2 2316.43 2990.9 TRUE FALSE 3206.606861 2626.133589 3122.984183 3209.089308 3393.809397 2714.665884 2825.718324 3038.40128 2557.231188 3361.435272 0.953939791 0.781253654 0.929062716 0.954678299 1.009631042 0.807591301 0.84062851 0.903899981 0.760755743 1 11.71486165 -6.789096268 24.99457501 0.855197221 0.919482969 0.128393765 0.080305278 465.0236407 420256.1326 0.028123716 0.024808054 1.63E-07 6.789096268 0.064285748 VDIDT(ph)PDINIEGSEGK ddPTM_A459_MK2206_30min_R2 3 VDIDTPDINIEGSEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDIDT(0.99)PDINIEGS(0.01)EGK;VDIDT(1)PDINIEGSEGK;VDIDT(1)PDINIEGSEGK 123.14 0.0022044 2817700 31566.5 32021.7 33527 35682 42848 27175.2 41817 29299.5 32480.3 54629 TRUE FALSE 33983.25551 30431.54894 34644.77345 32766.66646 41165.57223 28209.37128 36326.37767 33129.04525 35305.37778 52846.4602 0.64305642 0.575848388 0.655574154 0.620035218 0.778965555 0.533798691 0.687394719 0.626892419 0.6680746 1 15.68951922 -14.52287875 0.388698935 6.346373495 0.635046919 0.752468737 0.061536512 306.3846817 2.229508259 1384.780784 0.038310826 3.00E-15 14.52287875 -5.711326577 VDIDVPDVNIEGPDAK ddPTM_A459_MK2206_30min_R1 1 VDIDVPDVNIEGPDAK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 184.76 1.12E-05 2520700 1349.7 941.19 1033.9 987.74 1114.7 1035.4 970.99 877.24 995.13 862.04 FALSE TRUE 1234.900927 879.9183599 963.7217486 1063.815906 1070.299139 1094.023453 906.2170288 869.5703832 1098.577325 968.8360233 1.274623257 0.908222175 0.994721217 1.098035045 1.104726819 1.12921426 0.935366777 0.897541341 1.133914613 1 9.920108698 -7.264163389 24.98609849 0.983167462 1.07428789 0.151722589 0.105439594 500.7675168 4593271.071 0.042620077 0.030188295 5.44E-08 7.264163389 0.091120427 VDINT(ph)PDVDVHGPDWHLK ddPTM_A459_MK2206_30min_R1 3 VDINTPDVDVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDINT(1)PDVDVHGPDWHLK;VDINT(1)PDVDVHGPDWHLK;VDINT(1)PDVDVHGPDWHLK 157.53 1.61E-05 74230000 28715.6 24076.8 26584.9 24701.6 28063.9 24225.6 24185.9 25571.1 20362.8 22183.4 TRUE FALSE 26273.18743 22509.39594 24780.39106 26604.12151 26946.05544 25597.23254 22572.50274 25347.53457 22479.58593 24931.64707 1.053808734 0.90284432 0.993933172 1.067082389 1.080797244 1.02669641 0.905375512 1.016681108 0.90164865 1 14.60569057 -9.980069693 6.959229026 1 0.995294493 0.000478981 0.065372365 0 0 0.06513768 0.015798208 1.05E-10 9.980069693 -0.004705506 VDINT(ph)PDVDVHGPDWHLK ddPTM_A459_MK2206_30min_R2 2 VDINTPDVDVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDINT(1)PDVDVHGPDWHLK;VDINT(1)PDVDVHGPDWHLK 107.06 0.0012649 51042000 189316 153698 201413 227873 262016 200366 242278 176173 221028 330750 TRUE FALSE 203810.1785 146065.5808 208128.0089 209255.047 251727.9353 207991.0685 210466.6076 199199.416 240252.6159 319957.6546 0.636991101 0.45651535 0.650486106 0.654008566 0.786753909 0.650058111 0.657795194 0.622580561 0.750888789 1 18.28752146 -14.52287875 0.153353133 2.270194502 0.546079339 0.695546243 0.073286903 80.89606835 0.726212468 31.24791289 0.372132567 3.00E-15 14.52287875 -1.724115163 VDIQTEDLEDGTCK ddPTM_A459_MK2206_30min_R2 1 VDIQTEDLEDGTCK 14 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4;H7C5L4 O75369-8 FLNB Filamin-B 0 155.98 0.00079247 0 15080 16372 14461 9712.3 12564 12847 15098 13861 10454 14370 FALSE TRUE 16234.53639 15558.99029 14943.12252 8918.774022 12070.67423 13335.90159 13115.61446 15672.68029 11363.27002 13901.10808 1.167859159 1.119262594 1.074959092 0.641587273 0.868324609 0.959340904 0.943494173 1.127441079 0.817436276 1 13.76291227 -5.541227921 24.99984267 0.911077672 1.131948497 0.406048471 0.119487485 236.0069026 321546.4967 0.033818626 0.058587705 2.88E-06 5.541227921 0.220870825 VDKETNTETPAPS(ph)PTVVRPK ddPTM_A459_MK2206_30min_R1 1 VDKETNTETPAPSPTVVRPK 20 2 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 VDKETNTETPAPS(0.819)PT(0.181)VVRPK 83.31 0.003347 13077000 1618.1 1837.9 2333.8 1957 1204.5 1351.8 1542.9 1704.4 2080 2144.8 TRUE FALSE 1480.472098 1718.252376 2175.388158 2107.728479 1156.522214 1428.337748 1439.975956 1689.49861 2296.223443 2410.514016 0.614172781 0.712815758 0.902458207 0.874389638 0.479782406 0.592544884 0.597372986 0.700887279 0.952586638 1 11.2351251 -8.286045695 4.103019819 0.992649849 0.684823916 0.482614921 0.121446564 0.207817753 7.853708727 0.1223858 0.03469868 5.18E-09 8.286045695 -0.307825933 VDLTLDPDTAHPALMLS(ph)PDRR ddPTM_A459_MK2206_30min_R1 1 VDLTLDPDTAHPALMLSPDRR 21 1 H0YAD6;D6REK2;Q8WV44-3;Q8WV44-2;Q8WV44 H0YAD6 TRIM41 E3 ubiquitin-protein ligase TRIM41 1 VDLTLDPDTAHPALMLS(1)PDRR 85.913 0.00073384 4421200 1205.9 916 1077.5 1332.8 1253.8 1267.3 1126.7 1115.1 1028.4 570.64 TRUE FALSE 1103.331873 856.3682335 1004.362302 1435.452487 1203.858491 1339.053431 1051.539899 1105.350798 1135.30586 641.3351913 1.720366959 1.335289635 1.566048949 2.238225044 1.877112791 2.087915101 1.639610477 1.723514963 1.770222304 1 9.324934763 -9.80034578 1.003014841 0.985445314 1.780084163 0.47974836 0.241588584 18.46181063 13.01865909 1.398761892 0.080995755 1.58E-10 9.80034578 0.794638849 VDLTLLS(ph)PK ddPTM_A459_MK2206_30min_R1 2 VDLTLLSPK 9 0 E7EVA0;P27816-4;B5MEG9 E7EVA0 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VDLT(0.001)LLS(0.999)PK;VDLTLLS(1)PK 98.105 0.019997 18115400 9527 12263.1 11797.3 12058.1 8411.9 7953.9 8663.1 8566.2 9718.7 8258.1 TRUE FALSE 8716.678622 11464.76996 10996.53215 12986.81695 8076.836211 8404.242944 8085.200406 8491.306617 10728.99364 9281.175773 0.939178272 1.235271289 1.18482102 1.399264195 0.870238471 0.905514899 0.871139671 0.914895572 1.155995092 1 13.18009187 -6.28234277 24.99715888 0.942245054 1.192549783 0.439995073 0.130451374 731.7246566 875025.0033 0.04065781 0.046149219 5.22E-07 6.28234277 0.250304729 VDLTLLS(ph)PK ddPTM_A459_MK2206_30min_R2 2 VDLTLLSPK 9 0 E7EVA0;P27816-4;B5MEG9 E7EVA0 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VDLT(0.002)LLS(0.998)PK;VDLTLLS(1)PK 103.43 0.015244 8433500 67177 64430 64782 61240 61007 46594 76487 50048 44961 64201 TRUE FALSE 72320.12277 61230.49989 66941.79955 56236.4961 58611.55864 48367.16732 66444.16502 56589.44544 48871.62651 62106.12663 1.164460363 0.985901121 1.077861448 0.905490314 0.943732315 0.778782544 1.0698488 0.911173318 0.786905079 1 15.92244797 -4.163712695 0.63107362 0.9075735 1.536561116 0.399154626 0.091189223 7.098020924 1.214617407 0.040813267 3.844542072 6.86E-05 4.163712695 0.628987615 VDLYQQAS(ph)PPDALR ddPTM_A459_MK2206_30min_R1 2 VDLYQQASPPDALR 14 0 P48634;P48634-4;P48634-2;P48634-3 P48634;P48634-2 PRRC2A Protein PRRC2A 1 VDLYQQAS(1)PPDALR;VDLYQQAS(1)PPDALR 195.6 0.00012555 15446500 2350.5 1978.88 2137.4 2079.85 2290.7 1927.33 2362.7 1947.06 1618.37 1711.12 TRUE FALSE 2150.577632 1850.054552 1992.319243 2240.040407 2199.456568 2036.453759 2205.088594 1930.03706 1786.605353 1923.106464 1.11828319 0.962013589 1.035990092 1.164803119 1.143699847 1.058939688 1.146628455 1.003603854 0.929020513 1 10.90922292 -7.94737528 6.451905067 0.964814153 1.086510582 0.437178716 0.059484383 0.188684423 17.02104039 0.035627718 0.016722958 1.13E-08 7.94737528 0.121696429 VDNDENEHQLSLR ddPTM_A459_MK2206_30min_R1 2 VDNDENEHQLSLR 13 0 P06748-2;P06748;P06748-3;E5RGW4 P06748-2 NPM1 Nucleophosmin 0 ; 249.98 1.11E-77 467140000 13270.8 12403.2 12778 10313.9 13476.4 13209.72 14537 11566.4 11646.5 10955.3 FALSE TRUE 12142.04877 11595.74943 11910.66496 11108.27837 12939.60645 13957.64293 13567.26325 11465.27618 12857.19535 12312.52527 0.986154221 0.941784822 0.967361666 0.902193345 1.050930347 1.133613343 1.101907444 0.931188033 1.044237073 1 13.58783907 -6.278938114 24.52991487 1.047616886 0.950116334 0.413223217 0.054909437 667.9843838 936385.1507 0.018256117 0.020747437 5.26E-07 6.278938114 -0.097500553 VDNDENEHQLSLR ddPTM_A459_MK2206_30min_R2 6 VDNDENEHQLSLR 13 0 P06748-2;P06748;P06748-3;E5RGW4 P06748-2 NPM1 Nucleophosmin 0 ;;;;; 258.23 1.97E-29 1108583400 1407238 1619603 1418633 1731128 1648865 1521671 1671458 1381450 1404928 1544499 FALSE TRUE 1514977.223 1539175.87 1465929.516 1589689.305 1584122.275 1579579.256 1451993.557 1562010.258 1527126.098 1494102.124 1.013971668 1.030167781 0.981144122 1.063976337 1.060250333 1.057209699 0.971816808 1.045450798 1.022102889 1 20.51084733 -5.759433527 24.99995727 1.033214507 1.010601859 0.111638598 0.0294296 129.4887917 1613809.473 0.008338785 0.01357752 1.74E-06 5.759433527 -0.022612648 VDNLTYRT(ph)SPDTLR ddPTM_A459_MK2206_30min_R1 1 VDNLTYRTSPDTLR 14 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 VDNLT(0.001)YRT(0.496)S(0.496)PDT(0.008)LR 170.47 0.0016458 77456000 2893.7 2790.5 2872.1 3756.6 4283.9 2312 1893.3 3820.4 1245.2 604.32 TRUE FALSE 2647.57562 2608.837943 2677.149854 4045.933983 4113.263192 2442.903442 1767.001412 3786.998646 1374.642996 679.187724 3.89814999 3.841114688 3.941693525 5.957018715 6.056150673 3.596801526 2.601639207 5.575776051 2.023951475 1 9.407666573 -8.437332287 4.729831157 1.021150602 4.405638385 0.555856951 1.061612823 0.15688125 5.665266322 1.091765882 0.284724403 3.65E-09 8.437332287 3.384487784 VDNLTYRT(ph)SPDTLR ddPTM_A459_MK2206_30min_R2 1 VDNLTYRTSPDTLR 14 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 VDNLT(0.001)Y(0.001)RT(0.499)S(0.499)PDTLR 85.287 0.03432 31986000 8553.9 52668 23373 34035 55575 61014 42829 14188 68388 17551 TRUE FALSE 9208.793161 50052.58371 24152.24415 31254.23163 53392.84626 63335.93052 37205.50085 16042.42031 74336.26462 16978.31231 0.542385662 2.94803057 1.422535039 1.840832649 3.144767589 3.73040202 2.191354487 0.944877207 4.378307059 1 14.05140544 -6.13454304 7.369971495 2.600258793 1.747605028 0.121695435 1.149096731 0.617258108 34.24982077 0.331592435 0.429636996 7.34E-07 6.13454304 -0.852653764 VDNLTYRTS(ph)PDTLR ddPTM_A459_MK2206_30min_R1 2 VDNLTYRTSPDTLR 14 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 VDNLT(0.002)YRT(0.139)S(0.86)PDTLR;VDNLTYRT(0.013)S(0.986)PDTLR 109.95 0.0024218 197032000 12059.8 10429.5 11647.7 14402.5 17268.2 9387.9 8509 14650.6 4555.9 2349.53 TRUE FALSE 11034.05068 9750.537654 10857.08658 15511.78305 16580.37103 9919.434785 7941.380136 14522.51135 5029.502108 2640.607514 4.178603076 3.692535752 4.111586639 5.874323602 6.278998654 3.756497219 3.007406474 5.499685686 1.904676133 1 11.36665417 -8.404843596 4.531863952 1.040342512 4.524474351 0.614147473 0.991567294 0.151419526 4.57278345 1.029018137 0.269168641 3.94E-09 8.404843596 3.484131839 VDNLTYRTS(ph)PDTLR ddPTM_A459_MK2206_30min_R2 1 VDNLTYRTSPDTLR 14 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 VDNLT(0.001)Y(0.001)RT(0.051)S(0.944)PDT(0.003)LR 95.195 0.0069669 32363000 10006 56546 25007 45196 66565 58710 38498 23595 58329 25283 TRUE FALSE 10772.06705 53738.00787 25840.7209 41503.34223 63951.32364 60944.25019 33443.16636 26678.94751 63402.35099 24458.01778 0.440430911 2.19715303 1.056533736 1.696921746 2.614738619 2.491790248 1.367370269 1.090805794 2.59229311 1 14.57801986 -5.982453201 14.64854256 1.896929585 1.33601353 0.137353428 0.686230959 4.66779765 3888.323717 0.193377605 0.285872226 1.04E-06 5.982453201 -0.560916055 VDS(ph)LVSLSEEDLESDQR ddPTM_A459_MK2206_30min_R1 1 VDSLVSLSEEDLESDQR 17 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;H0YMW2;A0A087WY36;H0YLH1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 VDS(0.736)LVS(0.261)LS(0.003)EEDLESDQR 163.91 8.55E-06 1234600 404.98 558.14 458.38 476.78 453.3 459.24 521.79 534.36 550.72 720.71 TRUE FALSE 370.5343244 521.8049846 427.2664427 513.5016782 435.2441011 485.2417719 486.9823412 529.6881469 607.9693148 809.9969959 0.45745148 0.644206074 0.527491392 0.63395504 0.537340389 0.599066138 0.601214997 0.653938409 0.750582185 1 9.661772747 -8.702322122 0.801061445 1.002761495 0.565012019 0.87474992 0.05027162 0.261841596 0.351252945 0.045013846 0.016072339 1.98E-09 8.702322122 -0.437749475 VDS(ph)LVSLSEEDLESDQR ddPTM_A459_MK2206_30min_R2 5 VDSLVSLSEEDLESDQR 17 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;H0YMW2;A0A087WY36;H0YLH1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 VDS(0.859)LVS(0.019)LS(0.122)EEDLESDQR;VDS(0.981)LVS(0.019)LSEEDLESDQR;VDS(0.998)LVS(0.002)LSEEDLESDQR;VDS(0.977)LVS(0.023)LSEEDLESDQR;VDS(0.972)LVS(0.028)LSEEDLESDQR 219.53 9.10E-40 10212700 20608.4 20682.5 22678.6 22829.9 18697.5 19566.8 25821.9 21908.7 17486.5 24775.3 TRUE FALSE 22186.19495 19655.43713 23434.6932 20964.62414 17963.3422 20311.42829 22431.45351 24772.24231 19007.44416 23966.88399 0.925702105 0.82010816 0.977794744 0.874732992 0.749506787 0.847478892 0.935935332 1.033602963 0.793071146 1 14.54875473 -7.300179737 7.634761377 0.943769439 0.86401974 0.168021015 0.081347543 0.502950297 87.36864508 0.034018547 0.023072192 5.01E-08 7.300179737 -0.079749698 VDS(ph)PMLNR ddPTM_A459_MK2206_30min_R1 2 VDSPMLNR 8 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 VDS(1)PMLNR;VDS(1)PMLNR 129.85 0.0039704 15951100 7245.9 6860.1 7146 5974.7 7332.6 5706.3 6881.5 6690.1 6755.8 6666.8 TRUE FALSE 6629.598155 6413.506243 6660.94943 6434.872429 7040.527015 6029.385775 6422.447691 6631.609161 7458.089586 7492.733516 0.884803676 0.855963478 0.8889879 0.858815066 0.939647326 0.804697746 0.857156828 0.88507207 0.99537633 1 12.87127643 -8.242640072 4.063720211 1.001778934 0.870045213 0.71428606 0.031941963 0.107759986 4.043947706 0.02640877 0.008110839 5.72E-09 8.242640072 -0.131733721 VDS(ph)PMLNR ddPTM_A459_MK2206_30min_R2 2 VDSPMLNR 8 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 VDS(1)PMLNR;VDS(1)PMLNR 110.38 0.012048 16061800 93373 105800 97683 99604 98558 80400 97939 89295 87421 110316 TRUE FALSE 100521.7087 100546.1258 100939.7025 91466.03458 94688.11771 83459.67834 85079.49165 100966.1631 95024.72056 106716.398 0.941951852 0.942180656 0.945868717 0.85709447 0.887287423 0.782069859 0.797248532 0.94611667 0.890441604 1 16.70342235 -5.756181348 24.7758335 0.870562421 0.943218456 0.175660687 0.060443686 178.748706 842249.9653 0.01685618 0.028115127 1.75E-06 5.756181348 0.072656035 VDS(ph)PSHGLVTSSLCIPSPAR ddPTM_A459_MK2206_30min_R1 1 VDSPSHGLVTSSLCIPSPAR 20 0 Q9UER7-3;Q9UER7 Q9UER7-3 DAXX Death domain-associated protein 6 1 VDS(0.948)PS(0.052)HGLVTSSLCIPSPAR 99.964 0.00052086 16383000 2467.7 1870.2 2061.6 1515.4 2095.5 1774.7 2533.5 2174 2141.1 2177.5 TRUE FALSE 2257.809157 1748.44964 1921.664336 1632.116371 2012.031798 1875.18198 2364.494838 2154.992947 2363.675007 2447.265139 0.922584611 0.714450434 0.785229318 0.666914403 0.822155215 0.766235726 0.966178449 0.880571914 0.965843451 1 11.2569547 -7.258240656 24.92553404 0.943196117 0.773702653 0.599920024 0.069142047 187.9313317 1464431.7 0.026298536 0.019489862 5.52E-08 7.258240656 -0.169493464 VDS(ph)PSHGLVTSSLCIPSPAR ddPTM_A459_MK2206_30min_R2 2 VDSPSHGLVTSSLCIPSPAR 20 0 Q9UER7-3;Q9UER7 Q9UER7-3 DAXX Death domain-associated protein 6 1 VDS(0.565)PS(0.435)HGLVTSSLCIPSPAR;VDS(0.995)PS(0.005)HGLVTSSLCIPSPAR 210.39 7.68E-17 32714000 31929.1 37690 35480.1 39229.1 28085.7 30737 40308.7 29913.2 26057.8 31601 TRUE FALSE 34373.61645 35818.36941 36662.98883 36023.95704 26982.9143 31906.71807 35016.11927 33822.95795 28324.26034 30569.86196 1.124428252 1.171688948 1.199318102 1.178414122 0.882663924 1.043731179 1.145445777 1.106415135 0.926541977 1 14.89982242 -6.158583945 24.99999611 1.030468904 1.170898752 0.490487284 0.074674877 35.48091583 8614.439755 0.023109469 0.029834196 6.94E-07 6.158583945 0.140429848 VDS(ph)PTVTTTLK ddPTM_A459_MK2206_30min_R1 3 VDSPTVTTTLK 11 0 Q07866-6;Q07866-4;Q07866-7;G3V5R9;Q07866-9;H0YG16;G3V3H3;Q07866-3;G3V2E7;Q07866-10;Q07866-5;Q07866;Q07866-2;Q07866-8;G5E9S8;F8W6L3;E7EVH7;H0YJT3;H0YJL0;H0YJU9 Q07866-6 KLC1 Kinesin light chain 1 1 VDS(0.996)PT(0.003)VTTTLK;VDS(0.999)PT(0.001)VTTTLK;VDS(0.989)PT(0.011)VTTTLK 207.34 1.78E-05 66050800 14208 15206.2 15029.5 12180.8 10617.5 10373 12758.9 11357.4 15473.3 16480.7 TRUE FALSE 12999.53499 14216.27362 14009.33941 13118.96733 10194.58249 10960.3103 11907.77706 11258.10345 17081.80491 18522.45354 0.701825758 0.767515685 0.756343612 0.708273734 0.550390501 0.591731018 0.642883354 0.607808432 0.922221501 1 14.17698759 -8.373520295 4.347598053 0.993434109 0.666895283 0.756608751 0.06743787 0.120974595 3.534120526 0.074650434 0.019643403 4.23E-09 8.373520295 -0.326538826 VDS(ph)PTVTTTLK ddPTM_A459_MK2206_30min_R2 4 VDSPTVTTTLK 11 0 Q07866-6;Q07866-4;Q07866-7;G3V5R9;Q07866-9;H0YG16;G3V3H3;Q07866-3;G3V2E7;Q07866-10;Q07866-5;Q07866;Q07866-2;Q07866-8;G5E9S8;F8W6L3;E7EVH7;H0YJT3;H0YJL0;H0YJU9 Q07866-6 KLC1 Kinesin light chain 1 1 VDS(0.995)PT(0.004)VT(0.001)TTLK;VDS(0.994)PT(0.005)VTTTLK;VDS(0.998)PT(0.002)VTTTLK;VDS(0.998)PT(0.002)VTTTLK 188.15 1.94E-05 103067000 415420 397464 416118 368249 361879 256484 449200 333034 272689 413426 TRUE FALSE 447224.8746 377726.5157 429991.1664 338161.8787 347669.8122 266244.6783 390219.5004 376562.6873 296406.9963 399935.9435 1.118241263 0.944467538 1.075150092 0.845540103 0.869313743 0.665718305 0.975705002 0.9415575 0.741136177 1 18.60940942 -5.766894445 24.99802975 0.857050273 1.035804433 0.391720936 0.104244076 134.1084649 614560.2577 0.02873032 0.044031743 1.71E-06 5.766894445 0.17875416 VDS(ph)TTCLFPVEEK ddPTM_A459_MK2206_30min_R1 3 VDSTTCLFPVEEK 13 0 A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210 A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 1 VDS(0.485)T(0.485)T(0.031)CLFPVEEK;VDS(0.718)T(0.073)T(0.209)CLFPVEEK;VDS(0.484)T(0.484)T(0.031)CLFPVEEK 293.53 1.25E-64 625210000 26397 30127.1 28336.2 24285.9 20615.5 16482.6 21037.5 20857.1 23236.4 19338.5 TRUE FALSE 24151.79653 28165.82031 26412.81769 26156.40423 19794.34098 17415.83057 19634.12676 20674.74857 25651.90693 21734.29938 1.111229588 1.295915724 1.215259679 1.203462038 0.910742078 0.801306279 0.903370586 0.951249829 1.180250004 1 14.40768597 -6.2552651 23.30426384 0.944834147 1.213484085 0.597014311 0.099670136 135.5854143 511752.9291 0.031149481 0.039101954 5.56E-07 6.2552651 0.268649938 VDS(ph)TTCLFPVEEK ddPTM_A459_MK2206_30min_R2 5 VDSTTCLFPVEEK 13 0 A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210 A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 1 VDS(0.982)T(0.018)TCLFPVEEK;VDS(0.979)T(0.017)T(0.004)CLFPVEEK;VDS(0.488)T(0.488)T(0.025)CLFPVEEK;VDS(0.496)T(0.496)T(0.007)CLFPVEEK;VDS(0.931)T(0.069)TCLFPVEEK 258.39 1.37E-29 294860800 852772 993639 848692 837712 961556 642098 1044907 811688 615942 847309 TRUE FALSE 918060.88 944296.3321 876986.9677 769268.2499 923800.48 666533.4893 907709.4557 917778.4085 669515.5218 819661.3767 1.120048969 1.152056641 1.069938139 0.938519579 1.127051373 0.813181526 1.107420066 1.119704349 0.816819654 1 19.64466849 -5.526710544 4.952739487 0.997250404 1.131994675 0.234816956 0.107013417 0.263345617 18.50218876 0.028122225 0.053953977 2.97E-06 5.526710544 0.134744271 VDSEGDFS(ph)ENDDAAGDFR ddPTM_A459_MK2206_30min_R2 2 VDSEGDFSENDDAAGDFR 18 0 O43823;M0QYL4 O43823 AKAP8 A-kinase anchor protein 8 1 VDS(0.305)EGDFS(0.695)ENDDAAGDFR;VDS(0.001)EGDFS(0.999)ENDDAAGDFR 211.67 8.90E-12 36175000 67708 53325 57371 60320 58085 45593 64853 49587 49078 64656 TRUE FALSE 72891.77654 50676.95804 59283.72051 55391.66305 55804.29105 47328.07356 56337.7232 56068.19116 53346.71573 62546.28002 1.165405465 0.810231368 0.947837673 0.885610831 0.892207994 0.756688864 0.900736594 0.896427272 0.852915884 1 15.93263646 -4.753032836 24.99953828 0.878358707 1.165406 0.63794122 0.063865341 193.3623859 574980.7494 0.015144561 0.17027902 1.77E-05 4.753032836 0.287047293 VDSLVS(ph)LSEEDLESDQR ddPTM_A459_MK2206_30min_R1 3 VDSLVSLSEEDLESDQR 17 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;H0YMW2;A0A087WY36;H0YLH1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 VDSLVS(0.992)LS(0.008)EEDLESDQR;VDS(0.1)LVS(0.836)LS(0.058)EEDLES(0.006)DQR;VDS(0.041)LVS(0.949)LS(0.011)EEDLESDQR 327.53 1.40E-135 8040200 2640.74 3732.82 3449.47 2380.87 3787.25 3609.962 3819.23 2602.82 2871.13 2973.3 TRUE FALSE 2416.131196 3489.81274 3215.329587 2564.24502 3636.395813 3814.354929 3564.456135 2580.063819 3169.594238 3341.654851 0.723034336 1.044336682 0.962196795 0.767357831 1.088202096 1.141456882 1.066673937 0.772091653 0.948510358 1 11.70634701 -4.751406455 24.89341328 0.974076808 0.723033796 0.293145912 0.118130817 564.9843122 1401722.105 0.031406358 0.414167751 1.77E-05 4.751406455 -0.251043012 VDSLVSLS(ph)EEDLESDQR ddPTM_A459_MK2206_30min_R1 4 VDSLVSLSEEDLESDQR 17 0 Q12802-4;Q12802;Q12802-2;A0A087WTD7;A8MYJ1;H0YMW2;A0A087WY36;H0YLH1 Q12802-4 AKAP13 A-kinase anchor protein 13 1 VDSLVS(0.001)LS(0.999)EEDLESDQR;VDSLVSLS(1)EEDLESDQR;VDSLVSLS(1)EEDLESDQR;VDS(0.001)LVS(0.347)LS(0.653)EEDLESDQR 336.79 9.31E-137 12467700 4404.64 4099.91 3917.96 3331.83 4839.12 4846.2 4906.18 4183.96 3731.08 4566.08 TRUE FALSE 4030.002238 3833.005114 3652.019791 3588.448124 4646.367603 5120.587656 4578.897684 4147.380079 4118.939118 5131.760463 0.785305992 0.746918166 0.711650479 0.699262592 0.905413968 0.997822812 0.892266449 0.808178813 0.802636668 1 12.32523812 -6.267228927 24.47904832 0.895861218 0.734855736 0.607647629 0.064977182 271.2861524 1147036.038 0.021574532 0.025141904 5.40E-07 6.267228927 -0.161005483 VDSSTNSSPS(ph)PQQSESLS(ph)PAHTSDFR ddPTM_A459_MK2206_30min_R2 2 VDSSTNSSPSPQQSESLSPAHTSDFR 26 0 F2Z3H6;Q9BQE9-2;Q9BQE9-3;Q9BQE9 F2Z3H6 BCL7B B-cell CLL/lymphoma 7 protein family member B 2 VDS(0.014)S(0.016)T(0.052)NS(0.157)S(0.135)PS(0.578)PQQS(0.049)ES(0.09)LS(0.902)PAHT(0.007)S(0.003)DFR;VDS(0.118)S(0.136)T(0.105)NS(0.194)S(0.173)PS(0.273)PQQS(0.006)ES(0.376)LS(0.598)PAHT(0.016)S(0.005)DFR 74.874 0.0019796 5194000 11305.4 17051.1 15465.9 20132.1 22453 26780 23818 17404 19416.7 17948.3 TRUE FALSE 12170.95012 16204.36717 15981.52539 18487.24303 21571.3824 27799.13167 20690.66799 19678.76256 21105.52947 17362.64844 0.700984654 0.933288906 0.920454356 1.064770913 1.242401611 1.601088207 1.191676953 1.133396361 1.215570858 1 14.08369941 -5.849827247 1.821394451 1.251981482 0.827455333 0.554421429 0.152907444 0.266683018 1.805324942 0.050762363 0.09530627 1.41E-06 5.849827247 -0.424526149 VDSSTNSSPSPQQSES(ph)LSPAHTSDFR ddPTM_A459_MK2206_30min_R2 1 VDSSTNSSPSPQQSESLSPAHTSDFR 26 0 F2Z3H6;Q9BQE9-2;Q9BQE9-3;Q9BQE9 F2Z3H6 BCL7B B-cell CLL/lymphoma 7 protein family member B 1 VDSSTNSSPSPQQS(0.003)ES(0.584)LS(0.412)PAHT(0.001)S(0.001)DFR 167.97 2.95E-17 11357000 15758 23807 19848 34806 41307 49221 34209 19636 35181 19383 TRUE FALSE 16964.4446 22624.779 20509.72241 31962.23846 39685.07963 51094.13965 29717.31721 22202.49262 38240.97979 18750.5343 0.904744597 1.206620496 1.093820693 1.704604144 2.116477269 2.724943132 1.584878422 1.184099198 2.039460806 1 14.19464409 -5.797429696 4.273362108 1.828616758 1.073274318 0.319299489 0.462649137 0.245202773 9.787693423 0.137808637 0.221243891 1.59E-06 5.797429696 -0.755342441 VDSSTNSSPSPQQSESLS(ph)PAHTSDFR ddPTM_A459_MK2206_30min_R2 1 VDSSTNSSPSPQQSESLSPAHTSDFR 26 0 F2Z3H6;Q9BQE9-2;Q9BQE9-3;Q9BQE9 F2Z3H6 BCL7B B-cell CLL/lymphoma 7 protein family member B 1 VDSSTNSSPSPQQS(0.002)ES(0.041)LS(0.957)PAHTSDFR 158.91 3.80E-14 9317000 2579.5 8548.8 4504.2 12180 12439 21392 10345 6028.7 14232 5592.6 TRUE FALSE 2776.988503 8124.279023 4654.36778 11184.85504 11950.58236 22206.08755 8986.689073 6816.67179 15469.87363 5410.11392 0.513295754 1.50168354 0.860308646 2.067397324 2.208933589 4.104550824 1.661090544 1.259986738 2.859435839 1 12.40144326 -5.824864808 4.894701779 2.252863679 1.01054383 0.29467356 0.850290334 0.257108565 12.02569832 0.246252486 0.380648224 1.50E-06 5.824864808 -1.242319849 VDST(ph)TCLFPVEEK ddPTM_A459_MK2206_30min_R1 2 VDSTTCLFPVEEK 13 0 A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210 A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 1 VDS(0.156)T(0.841)T(0.003)CLFPVEEK;VDS(0.052)T(0.897)T(0.052)CLFPVEEK 289.72 3.41E-60 149107000 11551.5 11609.7 12458.3 11277.8 9431 7143.4 9315.3 9357 10268.6 8787.3 TRUE FALSE 10568.98427 10853.90642 11612.66531 12146.41811 9055.3433 7547.853135 8693.893334 9275.192736 11336.05772 9875.937065 1.070175336 1.099025475 1.175854527 1.229900315 0.916909782 0.764267035 0.880310727 0.939170903 1.14784629 1 13.26970193 -6.274652251 24.64015814 0.926463128 1.142839067 0.494686917 0.099487631 550.9483495 1027439.511 0.033046899 0.037690735 5.31E-07 6.274652251 0.216375939 VDST(ph)TCLFPVEEK ddPTM_A459_MK2206_30min_R2 1 VDSTTCLFPVEEK 13 0 A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210 A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 1 VDS(0.358)T(0.626)T(0.015)CLFPVEEK 133.04 0.0031868 6445400 48322 57864 55163 47180 61924 38807 65158 46712 31870 55805 TRUE FALSE 52021.56947 54990.5579 57002.10689 43325.24308 59492.55262 40283.82758 56602.67633 52817.41879 34641.99499 53984.08742 0.963646362 1.018643836 1.055905724 0.802555811 1.102038683 0.7462167 1.048506681 0.978388657 0.641707522 1 15.72024659 -6.22547383 0.618098914 0.887858997 1.012599998 0.076743097 0.1387519 2.731656828 2.160714275 0.093050327 0.190056232 5.95E-07 6.22547383 0.124741001 VDSTT(ph)CLFPVEEK ddPTM_A459_MK2206_30min_R1 1 VDSTTCLFPVEEK 13 0 A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210 A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 1 VDS(0.247)T(0.202)T(0.551)CLFPVEEK 162.67 0.00084955 136250000 13991 13825 14357 12571 11839 9329.1 10998 11021 13377 11090 TRUE FALSE 12800.99198 12924.98999 13382.48684 13539.2206 11367.42756 9857.30558 10264.34349 10924.64456 14767.58702 12463.91293 1.027044401 1.036992962 1.073698679 1.086273683 0.912027196 0.790867654 0.823524968 0.876501996 1.184827518 1 13.60546944 -6.269285562 23.28441658 0.912707112 1.055908632 0.245738574 0.104023372 307.2528386 911805.1636 0.033324045 0.038558366 5.38E-07 6.269285562 0.143201519 VDVADQAQDKDRDDR ddPTM_A459_MK2206_30min_R2 1 VDVADQAQDKDRDDR 15 2 E7EX17;P23588;P23588-2;F8VP89;F8W0K0;F8VSC7 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 68.044 0.03715 74109000 80023 82308 80159 73356 75693 58314 91328 73040 67514 91186 FALSE TRUE 86149.62241 78220.70441 82831.46105 67362.58015 72720.91249 60533.18013 79336.5239 82586.57878 73386.24568 88210.60829 0.976635623 0.886749405 0.939019271 0.763656225 0.824400987 0.686234698 0.899398898 0.936243162 0.83194354 1 16.42866455 -10.50874714 15.63965376 0.999999998 0.857898473 0.200746595 0.083377119 0 0 0.084997539 0.020614931 3.10E-11 10.50874714 -0.142101525 VDVEVPDVSLEGPEGK ddPTM_A459_MK2206_30min_R1 1 VDVEVPDVSLEGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 186.51 1.13E-05 2863200 2278.9 2119.6 1933.1 1921.5 2192.7 2038.4 2082.3 2059 2300.3 2146.1 FALSE TRUE 2085.067588 1981.613655 1801.886558 2069.494263 2105.360116 2153.812446 1943.393566 2040.99838 2539.424417 2411.97507 0.864464817 0.821573025 0.747058533 0.858008148 0.872878058 0.892966297 0.805727053 0.846193812 1.052840242 1 11.23599928 -8.254576149 23.80163335 1.026420133 0.837493999 0.774911258 0.040485042 117.0516403 405941.1628 0.030512259 0.010932127 5.56E-09 8.254576149 -0.188926134 VDVS(ph)CEPLEGVEK ddPTM_A459_MK2206_30min_R1 2 VDVSCEPLEGVEK 13 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0;H7C3N7 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 VDVS(1)CEPLEGVEK;VDVS(1)CEPLEGVEK 161.21 0.00036373 16923700 6953.3 6950.3 6879.2 5837 5488.3 4617.1 5549.2 6459.2 5721.7 6244.1 TRUE FALSE 6361.885322 6497.834207 6412.259071 6286.566751 5269.689389 4878.516212 5179.022993 6402.727895 6316.49119 7017.666249 0.906552848 0.925925226 0.913730982 0.895820139 0.750917642 0.695176436 0.737997906 0.912372813 0.900084297 1 12.77677562 -6.086469189 7.138021668 0.8168775 0.914625319 0.150060446 0.086697171 0.439075113 31.38156354 0.027091522 0.035189827 8.19E-07 6.086469189 0.097747819 VDVS(ph)CEPLEGVEK ddPTM_A459_MK2206_30min_R2 2 VDVSCEPLEGVEK 13 0 A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0;H7C3N7 A6NNK5 TP53BP1 Tumor suppressor p53-binding protein 1 1 VDVS(1)CEPLEGVEK;VDVS(1)CEPLEGVEK 128.76 0.0017935 7470900 105168 101809 105473 111073 94548 81471 115741 82258 74637 95723 TRUE FALSE 113219.7429 96753.3131 108989.4172 101997.9806 90835.57045 84571.43599 100544.0677 93009.40303 81128.79135 92599.56635 1.222681136 1.044857086 1.176997058 1.10149523 0.980950279 0.913302722 1.085794153 1.004425903 0.87612496 1 16.49871782 -6.187790159 3.777814457 0.978740752 1.137680717 0.580920212 0.067057061 0.181844769 5.042921837 0.020328344 0.026463922 6.49E-07 6.187790159 0.158939966 VEAAGPGGESEPTGSGGTLAHT(ph)PR ddPTM_A459_MK2206_30min_R1 1 VEAAGPGGESEPTGSGGTLAHTPR 24 0 Q9UMN6;A0A669KBI7;A0A669KAX8 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 VEAAGPGGESEPT(0.018)GS(0.011)GGT(0.28)LAHT(0.69)PR 95.47 1.55E-05 2893200 1673.7 1183.5 1401.1 1023.9 1359.2 1327.5 1357.6 1498.6 1331.8 1253.7 TRUE FALSE 1531.343026 1106.453935 1305.997236 1102.760955 1305.060186 1402.661903 1267.036981 1485.497898 1470.245376 1409.017821 1.086815939 0.785266104 0.926884824 0.782645144 0.926219787 0.995489114 0.899234177 1.054278999 1.043454067 1 10.46047414 -7.385639427 1.131264682 1.034668049 0.893243838 0.242018472 0.087806601 0.65367643 1.591251703 0.062207607 0.031922911 4.11E-08 7.385639427 -0.141424211 VEAAGPGGESEPTGSGGTLAHT(ph)PR ddPTM_A459_MK2206_30min_R2 1 VEAAGPGGESEPTGSGGTLAHTPR 24 0 Q9UMN6;A0A669KBI7;A0A669KAX8 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 VEAAGPGGESEPTGS(0.001)GGT(0.017)LAHT(0.982)PR 127.25 1.82E-07 4163300 12575 19700 12220 22138 20059 15921 15202 15991 13399 16984 TRUE FALSE 13537.75167 18721.72665 12627.4087 20329.25458 19271.38287 16526.88481 13205.95914 18081.07861 14564.4208 16429.81347 0.823974763 1.139497212 0.768566772 1.237339342 1.172952018 1.005908244 0.803780223 1.100504192 0.886462943 1 14.00402848 -10.34999689 12.7354795 1 1.001338386 0 0.158731335 0 0 0.150159861 0.036419116 4.47E-11 10.34999689 0.001338386 VEANS(ph)PLPK ddPTM_A459_MK2206_30min_R1 1 VEANSPLPK 9 0 Q9H7C4-2;Q9H7C4 Q9H7C4-2 SYNC Syncoilin 1 VEANS(1)PLPK 84.479 0.036442 10640000 3632.2 3516.1 3683.5 3565.7 3716.9 3341.6 3123.3 3598.5 3356.1 3102.5 TRUE FALSE 3323.262317 3287.201251 3433.474283 3840.330832 3568.848002 3530.798504 2914.950356 3567.038694 3704.978605 3486.861123 0.953081353 0.942739368 0.984689141 1.101371892 1.02351309 1.012600841 0.835981203 1.022994197 1.062554107 1 11.76771319 -5.425888944 5.345596843 1.005697565 0.949646917 0.118658638 0.064825104 0.543889499 23.53082645 0.01848503 0.039229147 3.75E-06 5.425888944 -0.056050648 VEANS(ph)PLPK ddPTM_A459_MK2206_30min_R2 1 VEANSPLPK 9 0 Q9H7C4-2;Q9H7C4 Q9H7C4-2 SYNC Syncoilin 1 VEANS(1)PLPK 98.182 0.019927 9851700 56622 64259 61530 60475 60226 48288 71459 58279 51422 61587 TRUE FALSE 60957.02385 61067.9915 63581.37949 55533.99905 57861.22463 50125.63368 62076.34746 65896.2654 55894.59261 59577.42123 1.023156468 1.025019046 1.067205968 0.932131635 0.971193842 0.841352859 1.041944182 1.106061055 0.938184155 1 15.86247806 -10.84958076 17.81781726 1 0.994813421 0.000502521 0.072661986 0 0 0.073608207 0.017852612 1.41E-11 10.84958076 -0.005186579 VEAPEYIPISDDPKAS(ph)AK ddPTM_A459_MK2206_30min_R2 1 VEAPEYIPISDDPKASAK 18 1 Q1ED39;H3BPL4 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 VEAPEYIPIS(0.002)DDPKAS(0.998)AK 88.872 0.0034856 4236400 118760 86409 88138 67224 86085 54786 95605 64283 53085 107810 TRUE FALSE 127852.3569 82118.05471 91076.47693 61731.58416 82704.87036 56870.91962 83051.94866 72685.00882 57702.23734 104292.1685 1.225905633 0.78738467 0.873282033 0.591910064 0.793011321 0.545303837 0.796339263 0.696936403 0.553274883 1 16.6702713 -2.074683775 1.055702267 0.704398559 199.9864673 0.532704098 0.137533714 434.9176386 1.703850821 0.039596167 208330.8152 0.00842008 2.074683775 199.2820687 VEAPSLDVHMDS(ph)PDINIEGPDVK ddPTM_A459_MK2206_30min_R1 3 VEAPSLDVHMDSPDINIEGPDVK 23 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VEAPS(0.002)LDVHMDS(0.998)PDINIEGPDVK;VEAPSLDVHMDS(1)PDINIEGPDVK;VEAPS(0.012)LDVHMDS(0.988)PDINIEGPDVK 62.57 0.0048348 12295400 2822.35 3346.28 3290.03 2943.46 3136.92 2456.04 3055.26 3046.46 2772.62 2899.46 TRUE FALSE 2582.294312 3128.436564 3066.71193 3170.165799 3011.969834 2595.098862 2851.44918 3019.825121 3060.843771 3258.666995 0.792438846 0.960035674 0.941093992 0.972841289 0.924295069 0.796368229 0.875035462 0.926705652 0.939293207 1 11.67006621 -8.541335901 1.785455483 0.998737065 0.900288475 0.22639139 0.058829533 0.650054696 4.667582534 0.059244544 0.016871659 2.88E-09 8.541335901 -0.09844859 VEDLAWHR ddPTM_A459_MK2206_30min_R2 2 VEDLAWHR 8 0 B4DEY6;Q9NZU5-2;Q9NZU5 B4DEY6 LMCD1 LIM and cysteine-rich domains protein 1 0 ; 125.31 0.0067241 2363800 65983 90005 82786 90876 83929 83334 88304 72961 75843 75735 FALSE TRUE 71034.70921 85535.48258 85546.04392 83451.1401 80633.52575 86505.33376 76709.57873 82497.25321 82439.68705 73263.77315 0.969574814 1.167500374 1.167644529 1.139050536 1.100592043 1.180738174 1.047032871 1.126030638 1.125244899 1 16.16081238 -10.33277243 9.737650158 1.000005878 1.117612229 0.238340538 0.060623329 0 0 0.05638759 0.013675999 4.65E-11 10.33277243 0.117606352 VEDMAELTCLNEASVLHNLK ddPTM_A459_MK2206_30min_R1 1 VEDMAELTCLNEASVLHNLK 20 0 P35579;B1AH99;Q5BKV1;P35580;P35580-5;P35580-2;P35580-3;P35580-4;E7ERA5 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 0 84.581 0.0035695 5513100 1414.5 1649.3 1270.5 1410.8 1595.9 1619.9 1669.3 1641.4 1444.8 1245 FALSE TRUE 1294.189347 1541.93027 1184.262 1519.46006 1532.331924 1711.617338 1557.944043 1627.049413 1594.99213 1399.239999 0.924923064 1.101976981 0.846360882 1.085918114 1.095117295 1.223247862 1.113421603 1.162809392 1.139898896 1 10.45042772 -5.982654985 23.34083725 1.131090901 0.97116973 0.458649316 0.079494791 94.83822524 127619.3426 0.021215824 0.031456902 1.04E-06 5.982654985 -0.159921171 VEEAS(ph)PGRPSSVDTLLSPTALIDSILR ddPTM_A459_MK2206_30min_R1 1 VEEASPGRPSSVDTLLSPTALIDSILR 27 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 1 VEEAS(0.69)PGRPS(0.217)S(0.086)VDT(0.004)LLS(0.001)PTALIDS(0.001)ILR 49.662 0.018291 235560000 0 79.585 73.433 0 0 0 0 0 0 0 TRUE FALSE 0 74.40400203 68.44857256 0 0 0 0 0 0 0 0 VEEASPGRPSSVDTLLSPTALIDSILR ddPTM_A459_MK2206_30min_R1 2 VEEASPGRPSSVDTLLSPTALIDSILR 27 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 0 ; 188.73 1.02E-31 37414000 1304.34 1046.6 1327.87 1247.28 1187.89 1102.93 1409.69 1059.84 1395.15 1300.15 FALSE TRUE 1193.399034 978.4661498 1237.737884 1343.345722 1140.573826 1165.376943 1315.652152 1050.573931 1540.180835 1461.222398 0.816712799 0.669621648 0.847056469 0.919330092 0.780561417 0.797535642 0.900377762 0.718969222 1.05403588 1 10.51296006 -8.271742463 24.98968505 1.027017983 0.808832606 0.599942999 0.07208004 539.5802352 1308713.852 0.067080808 0.01809484 5.35E-09 8.271742463 -0.218185377 VEEEEER ddPTM_A459_MK2206_30min_R2 1 VEEEEER 7 0 P35579;P35579-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35579-2;P35580 MYH9;MYH10 Myosin-9;Myosin-10 0 143.11 0.045242 16911000 78258 75755 65548 69529 79891 65578 79867 96035 111230 90516 FALSE TRUE 84249.49265 71993.11686 67733.3376 63848.25829 76754.07792 68073.61674 69380.36696 108587.1042 120904.5843 87562.47033 0.962164411 0.822191478 0.773543018 0.729173789 0.876563642 0.777429148 0.792352782 1.240110105 1.380780874 1 16.41802504 -7.762682179 24.9991728 1.232834238 0.814582891 0.735803062 0.106153816 14.87216796 299131.9764 0.052226767 0.027274267 1.73E-08 7.762682179 -0.418251347 VEEGGRHPS(ph)PCQFTIATPK ddPTM_A459_MK2206_30min_R2 1 VEEGGRHPSPCQFTIATPK 19 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 VEEGGRHPS(0.95)PCQFT(0.05)IAT(0.001)PK 80.702 0.0033904 9062300 25609 35083 33623 27612 35026 28240 30621 26548 24864 32926 TRUE FALSE 27569.64473 33340.82924 34743.97404 25356.01127 33650.70325 29314.69299 26600.42592 30017.91475 27026.62578 31851.62732 0.865564715 1.046754343 1.090806874 0.796066431 1.056483015 0.9203515 0.835135538 0.942429549 0.848516326 1 14.95907946 -6.984469657 24.79273729 0.898297187 0.973874427 0.096669795 0.093762568 456.5742701 728874.8359 0.032135126 0.02833123 1.04E-07 6.984469657 0.07557724 VEENPDADS(ph)DFDAK ddPTM_A459_MK2206_30min_R1 2 VEENPDADSDFDAK 14 0 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 VEENPDADS(1)DFDAK;VEENPDADS(1)DFDAK 177.04 6.41E-10 4221000 4201.5 4290.3 4400.3 3768.7 2730.1 2865.7 3508.3 2927.5 4633.7 4783.4 TRUE FALSE 3844.140362 4011.00069 4101.619896 4058.965927 2621.354336 3027.953458 3274.267708 2901.905176 5115.389697 5376.003705 0.715055378 0.746093364 0.762949604 0.755015463 0.487602777 0.563235002 0.609052353 0.539788537 0.951522725 1 12.39231842 -8.331766113 6.428602567 0.986333555 0.648931614 0.667801361 0.092697 0.172337804 12.5409788 0.099885622 0.026083517 4.66E-09 8.331766113 -0.33740194 VEEPSQCLASGTAISELIIEDNNAS(ph)PQK ddPTM_A459_MK2206_30min_R1 3 VEEPSQCLASGTAISELIIEDNNASPQK 28 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 VEEPSQCLASGTAISELIIEDNNAS(1)PQK;VEEPSQCLASGTAISELIIEDNNAS(1)PQK;VEEPSQCLASGTAISELIIEDNNAS(1)PQK 222.09 3.10E-45 33097100 10588 10835.4 9530.7 7120.8 6186.1 7100.5 9638.2 6710.5 12482.2 13319.1 TRUE FALSE 9687.435 10130.01349 8883.782638 7669.24525 5939.694538 7502.524174 8995.253264 6651.830806 13779.76936 14969.17066 0.647159099 0.676725098 0.593471932 0.512336015 0.396795165 0.501198386 0.600918612 0.444368693 0.920543273 1 13.86970667 -8.346482924 5.157973374 0.986873994 0.54704351 0.796317682 0.083857448 0.105289689 4.534519801 0.088270437 0.023165719 4.50E-09 8.346482924 -0.439830484 VEEPSQCLASGTAISELIIEDNNAS(ph)PQK ddPTM_A459_MK2206_30min_R2 3 VEEPSQCLASGTAISELIIEDNNASPQK 28 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 VEEPSQCLASGTAISELIIEDNNAS(1)PQK;VEEPSQCLASGTAISELIIEDNNAS(1)PQK;VEEPSQCLASGTAISELIIEDNNAS(1)PQK 170.03 4.22E-22 14178900 147927 115813 116216 120463 119968 103230 158424 101887 89394 154828 TRUE FALSE 159252.4049 110061.8948 120090.5834 110620.7876 115257.4535 107158.49 137622.7385 115203.9807 97169.32853 149775.975 1.063270694 0.734843454 0.80180138 0.738574979 0.76953232 0.71545847 0.918857236 0.769175301 0.648764453 1 17.1924467 -4.755648645 24.99680921 0.781388196 1.063271148 0.419547481 0.096607693 172.6779055 745321.874 0.022502127 0.19577977 1.76E-05 4.755648645 0.281882952 VEEPSQCLASGTAISELIIEDNNAS(ph)PQKLR ddPTM_A459_MK2206_30min_R1 2 VEEPSQCLASGTAISELIIEDNNASPQKLR 30 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 VEEPSQCLASGTAISELIIEDNNAS(1)PQKLR;VEEPSQCLASGTAIS(0.062)ELIIEDNNAS(0.937)PQKLR 87.544 1.02E-06 18750900 3754.7 2871.1 3172.4 3149.8 3440 2907.4 2474.2 3276.6 1804.49 1014.08 TRUE FALSE 3435.343048 2684.190868 2957.066327 3392.398142 3302.977516 3072.014475 2309.150632 3247.953032 1992.073193 1139.711886 3.014220602 2.355148613 2.59457356 2.976540109 2.898081134 2.69543076 2.026082785 2.849801841 1.747874368 1 10.15445345 -8.649956818 0.884593513 0.98156881 2.721489631 0.757780231 0.303778296 0.36845686 0.613656814 0.290084486 0.100089463 2.24E-09 8.649956818 1.739920821 VEESSEIS(ph)PEPK ddPTM_A459_MK2206_30min_R1 1 VEESSEISPEPK 12 0 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 VEESSEIS(1)PEPK 164.64 0.00051208 6794600 3168.7 3785.3 3284.2 2624.5 2450.2 2428.3 3117.2 2526 3872.7 5222.6 TRUE FALSE 2899.185425 3538.876282 3061.277654 2826.639445 2352.603346 2565.788248 2909.257276 2503.915448 4275.281024 5869.615117 0.493931096 0.602914537 0.521546574 0.481571515 0.400810496 0.437130578 0.495647026 0.426589376 0.728375019 1 12.51905019 -8.530404995 3.141056724 0.998897824 0.484664978 0.900593895 0.054440848 0.071885798 1.823179649 0.058554954 0.015567477 2.95E-09 8.530404995 -0.514232846 down VEET(ph)SPLGNAR ddPTM_A459_MK2206_30min_R1 1 VEETSPLGNAR 11 0 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 VEET(0.844)S(0.156)PLGNAR 109.39 0.02204 7794200 4231 3973.2 3735.1 2936.7 3984.4 3918.7 4973.5 3646.5 4774.8 5498.4 TRUE FALSE 3871.131232 3714.543958 3481.571819 3162.885143 3825.692911 4140.573408 4641.72689 3614.619035 5271.157547 6179.583303 0.626438878 0.601099423 0.563399124 0.511828223 0.619085903 0.670040876 0.75113914 0.584929251 0.852995629 1 12.59329384 -8.636987264 0.514200277 1.015910778 0.576596968 0.796842329 0.063929326 0.512668511 0.315168973 0.07892596 0.034879716 2.31E-09 8.636987264 -0.43931381 VEET(ph)SPLGNAR ddPTM_A459_MK2206_30min_R2 2 VEETSPLGNAR 11 0 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 VEET(0.895)S(0.105)PLGNAR;VEET(0.864)S(0.136)PLGNAR 134.75 0.003669 26959000 171533 133827 143858 154017 130136 138862 145437 127299 122394 153195 TRUE FALSE 184665.6984 127181.3458 148654.1539 141433.3184 125026.2068 144146.4907 126340.9472 143937.4164 133039.6089 148196.2597 1.246088793 0.858195383 1.003089783 0.954364967 0.843652917 0.972672934 0.852524534 0.97126214 0.897725821 1 17.17714951 -4.753853782 24.99933794 0.926813519 1.246089361 0.727886437 0.058310625 133.2513225 439111.2087 0.013507599 0.139902501 1.76E-05 4.753853782 0.319275842 VEETVKHDWDR ddPTM_A459_MK2206_30min_R1 4 VEETVKHDWDR 11 1 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;Q16881-7;E2QRB9;E9PKD3;A0A0B4J225 Q16881 TXNRD1 "Thioredoxin reductase 1, cytoplasmic" 0 ;;; 106.62 0.0087741 199080000 19800.8 19608 21891.8 20381.1 22446.5 17630.3 18193.2 21421.5 14088.9 9118.1 FALSE TRUE 18116.63798 18331.51564 20405.84561 21950.85585 21552.40837 18628.51235 16979.56482 21234.21408 15553.49157 10247.71907 1.767870281 1.78883862 1.991257321 2.142023577 2.103142 1.817820359 1.656911622 2.072091745 1.517751557 1 13.32301521 -8.551797799 3.509610587 1.00091897 1.915768829 0.778745222 0.153077031 0.108831009 3.803430135 0.159766409 0.042143461 2.81E-09 8.551797799 0.914849859 VEETVKHDWDR ddPTM_A459_MK2206_30min_R2 3 VEETVKHDWDR 11 1 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;Q16881-7;E2QRB9;E9PKD3;A0A0B4J225 Q16881 TXNRD1 "Thioredoxin reductase 1, cytoplasmic" 0 ;; 85.813 0.027354 111666000 97801 204358 169684 206124 228421 188168 203591 150941 207286 151104 FALSE TRUE 105288.7198 194209.8789 175341.1799 189283.0098 219452.0438 195328.8651 176859.2571 170669.507 225315.3616 146173.4889 0.720299697 1.328625871 1.199541594 1.294920244 1.501312212 1.336281063 1.209927043 1.167581812 1.541424258 1 17.15732215 -4.759420643 24.99552726 1.295262724 0.720298964 0.560538826 0.150258063 37.85506366 468593.2615 0.035872655 0.228299501 1.74E-05 4.759420643 -0.57496376 VEEVEDVS(ph)PGPWGLVK ddPTM_A459_MK2206_30min_R1 2 VEEVEDVSPGPWGLVK 16 0 O15061;A0A075B7B1;O15061-2;H0YL34 O15061 SYNM Synemin 1 VEEVEDVS(1)PGPWGLVK;VEEVEDVS(1)PGPWGLVK 207.79 6.82E-08 6105500 2446 2418.7 2576.1 1557.65 1805.92 2188 2495.8 1910.84 2632 3519.1 TRUE FALSE 2237.954856 2261.24219 2401.241509 1677.620473 1733.986382 2311.882669 2329.309736 1894.133727 2905.605819 3955.072676 0.56584418 0.571732146 0.607129554 0.424169316 0.438420865 0.584536078 0.588942335 0.478912496 0.734652953 1 11.94948849 -8.556348394 3.094770289 0.999418156 0.533670813 0.84696531 0.06212424 0.097589665 2.448186001 0.064110784 0.017051271 2.78E-09 8.556348394 -0.465747343 VEFMDDTSR ddPTM_A459_MK2206_30min_R1 3 VEFMDDTSR 9 0 P62857 P62857 RPS28 40S ribosomal protein S28 0 ;; 155.58 0.011444 13086000 11234.2 10997.7 10623.2 9320.3 11513.3 9310.4 10331.9 10004.4 8871.6 9029.4 FALSE TRUE 10278.6723 10281.74773 9902.126782 10038.15112 11054.70088 9837.546802 9642.677803 9916.932586 9793.834567 10148.03024 1.012873637 1.013176694 0.975768356 0.98917237 1.089344495 0.969404561 0.950201918 0.977227339 0.965097101 1 13.3089121 VEFMDDTSR ddPTM_A459_MK2206_30min_R2 2 VEFMDDTSR 9 0 P62857 P62857 RPS28 40S ribosomal protein S28 0 ; 163.15 0.0132 29184000 63660 85553 70914 90062 84041 81492 79856 60032 76925 71555 FALSE TRUE 68533.85855 81304.56243 73278.23737 82703.64651 80741.12807 84593.23516 69370.81128 67878.38852 83615.79745 69220.16621 0.990085149 1.174579127 1.058625562 1.194791215 1.166439384 1.222089455 1.002176318 0.980615798 1.207968747 1 16.07890479 -10.76187181 5.928313438 0.999996567 1.111512621 0.118622788 0.090603949 4.15E-06 5.32E-07 0.088460554 0.021454175 1.73E-11 10.76187181 0.111516054 VEGFLEEDRR ddPTM_A459_MK2206_30min_R2 2 VEGFLEEDRR 10 1 Q9NX02;A0A0G2JMG8;A0A0G2JLX3;J3KN39;A0A0G2JNC8;A0A0G2JP37;A0A0G2JPQ2;A0A0G2JPB6;A0A0G2JLQ8;Q9NX02-5;Q9NX02-2;Q9NX02-4;Q9NX02-3;Q8WX94;K7ERG0;Q8WX94-3;A0A0G2JM25;A0A0G2JNK1;A0A0G2JMB6;A0A0G2JPH3;Q8WX94-2;A0A0G2JNK3 Q9NX02 NLRP2;NLRP7 "NACHT, LRR and PYD domains-containing protein 2;NACHT, LRR and PYD domains-containing protein 7" 0 ; 125.74 0.0048374 4304100 9562.8 12506.3 9764.1 11571.1 13780.7 15807.7 12247.9 10038.6 12757.1 10638 FALSE TRUE 10294.93532 11885.25533 10089.63022 10625.70412 13239.60048 16409.2731 10639.73602 11350.67949 13866.6895 10290.88293 1.000393784 1.154930574 0.980443591 1.03253571 1.286536886 1.594544726 1.033899238 1.102984026 1.347473253 1 13.32907915 -6.255601037 24.5145034 1.241387121 1.04573464 0.227145705 0.166404365 566.8812419 2380264.134 0.050959547 0.064011061 5.55E-07 6.255601037 -0.195652481 VEGNAVACPVSSAQS(ph)PPHSAGAPAAK ddPTM_A459_MK2206_30min_R2 2 VEGNAVACPVSSAQSPPHSAGAPAAK 26 0 Q8NEZ4;Q8NEZ4-3;H7BY37;Q8NEZ4-2;H0Y765 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 VEGNAVACPVSSAQS(0.987)PPHS(0.013)AGAPAAK;VEGNAVACPVS(0.001)S(0.009)AQS(0.989)PPHSAGAPAAK 126.8 4.67E-09 23197200 109444 115249 115668 120972 113357 98642 119921 98460 88142 125139 TRUE FALSE 117823.1168 109525.9022 119524.3134 111088.2006 108906.0346 102395.8904 104175.2286 111329.0601 95808.43184 121055.7247 0.97329653 0.904756074 0.987349534 0.917661688 0.89963556 0.845857482 0.860555987 0.919651345 0.791440736 1 16.88531178 -6.189408544 2.577824955 0.877498324 0.949980241 0.230890541 0.054761926 0.383257297 4.997516173 0.016476635 0.02190027 6.47E-07 6.189408544 0.072481917 VEGVHT(ph)PR ddPTM_A459_MK2206_30min_R2 1 VEGVHTPR 8 0 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 VEGVHT(1)PR 91.636 0.036045 15124000 127780 114010 147020 137800 96715 118920 122150 113140 121670 129500 TRUE FALSE 137562.935 108348.4292 151921.5734 126541.2992 92917.48315 123445.5839 106111.5583 127927.7865 132252.6367 125274.4256 1.098092722 0.864888653 1.212710198 1.010112787 0.741711508 0.985401317 0.847032886 1.021180387 1.055703397 1 16.9347324 -6.010591097 24.98996757 0.934478517 1.051232194 0.167475806 0.11700415 922.7173013 2177183.027 0.033595263 0.046397854 9.76E-07 6.010591097 0.116753677 VEHHDHAVVSGR ddPTM_A459_MK2206_30min_R2 4 VEHHDHAVVSGR 12 0 O95831-3;O95831;E9PMA0;O95831-5;O95831-2 O95831-3 AIFM1 "Apoptosis-inducing factor 1, mitochondrial" 0 ;;; 76.326 0.027055 2550500 10225.4 8533.6 8154.3 9710 9254.2 7852.3 10565.2 6786.5 13092.2 11155.2 FALSE TRUE 11008.26449 8109.833833 8426.160292 8916.661939 8890.833609 8151.124779 9177.976549 7673.518852 14230.93589 10791.20674 1.020114317 0.751522423 0.780835776 0.826289604 0.823896143 0.755348774 0.850505117 0.711089968 1.318752966 1 13.39756858 -8.255498859 24.99901908 1.159376492 0.81157347 0.624681521 0.106763399 251.9914604 1060446.83 0.070190466 0.024982844 5.55E-09 8.255498859 -0.347803022 VEHS(ph)PGPPLADAECQEGLSENSACR ddPTM_A459_MK2206_30min_R1 2 VEHSPGPPLADAECQEGLSENSACR 25 0 Q3T8J9-3;Q3T8J9;A0A087WUE6;Q3T8J9-2 Q3T8J9-3 GON4L GON-4-like protein 1 VEHS(1)PGPPLADAECQEGLSENSACR;VEHS(1)PGPPLADAECQEGLSENSACR 133.91 2.03E-09 0 1225.27 1143.91 1096.56 798.51 1410.55 1155.84 1284.54 950.19 933.9 950.5 TRUE FALSE 1121.054352 1069.441251 1022.128562 860.0113786 1354.364807 1221.282662 1198.85068 941.882589 1030.982247 1068.255116 1.049425681 1.001110348 0.956820658 0.805061793 1.267828992 1.143250001 1.122251289 0.881701922 0.965108645 1 10.06104051 -3.835447422 4.587448513 1.019153326 44.38794649 0.005645741 0.126531696 60243.59644 822.3508011 0.034541531 27522600.75 0.000146067 3.835447422 43.36879316 VEHS(ph)PGPPLADAECQEGLSENSACR ddPTM_A459_MK2206_30min_R2 2 VEHSPGPPLADAECQEGLSENSACR 25 0 Q3T8J9-3;Q3T8J9;A0A087WUE6;Q3T8J9-2 Q3T8J9-3 GON4L GON-4-like protein 1 VEHS(1)PGPPLADAECQEGLSENSACR;VEHS(1)PGPPLADAECQEGLSENSACR 108.96 1.53E-07 14261200 33187.5 40675 37546 41798 45840 43081 42917 34023.5 35279 43707 TRUE FALSE 35728.36052 38655.13865 38797.7649 38382.96969 44040.09127 44720.47764 37281.94635 38470.48827 38347.50365 42280.84417 0.845024768 0.914247088 0.917620394 0.907809918 1.041608609 1.05770068 0.881769205 0.909879853 0.906971098 1 15.36771656 -4.850289958 1.072622832 0.95751123 0.806833703 0.270497383 0.056884642 2.537550321 2.586148035 0.020369395 0.42624169 1.41E-05 4.850289958 -0.150677527 VEILANDQGNR ddPTM_A459_MK2206_30min_R1 1 VEILANDQGNR 11 0 P17066;P48741 P17066 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 152.04 0.0081065 54058000 2402.5 2420.1 2344.1 2134.4 2444.8 2009.9 2046 2227.6 2029.9 1980.6 FALSE TRUE 2198.154759 2262.55105 2184.989023 2298.791858 2347.418439 2123.698801 1909.515073 2208.124328 2240.915369 2225.971681 0.98750347 1.01643299 0.981588868 1.032713883 1.054558986 0.954054726 0.857834396 0.991982219 1.006713333 1 11.12021952 -6.790132006 24.84163157 0.955098122 1.013840572 0.256019927 0.043882565 268.5514984 232505.7081 0.016235424 0.014320527 1.62E-07 6.790132006 0.05874245 VEKEEAGGGIS(ph)EEEAAQYDR ddPTM_A459_MK2206_30min_R1 1 VEKEEAGGGISEEEAAQYDR 20 1 A0A590UK93;A0A590UKC5;M0QZS6;B3KNJ4;Q9UBE0-2;Q9UBE0-3;Q9UBE0;M0R375 A0A590UK93 SAE1 "SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed" 1 VEKEEAGGGIS(1)EEEAAQYDR 63.272 0.011419 4365500 1210.3 1129 1442.7 1314.3 1305.7 895.64 1157.5 1194.1 937.13 775.5 TRUE FALSE 1107.357629 1055.501895 1344.773544 1415.527614 1253.691204 946.3503628 1080.285287 1183.66011 1034.548017 871.5747947 1.270525073 1.211028475 1.542923857 1.62410343 1.438420675 1.085793633 1.239463662 1.358070606 1.186987076 1 9.767480665 -6.744550854 24.91949667 1.200529954 1.424392303 0.415197349 0.142557123 279.2894174 412098.523 0.051150753 0.051020763 1.80E-07 6.744550854 0.22386235 VELKS(ph)EANDAVNSSTK ddPTM_A459_MK2206_30min_R2 1 VELKSEANDAVNSSTK 16 1 O15234;K7EQ38 O15234 CASC3 Protein CASC3 1 VELKS(1)EANDAVNSSTK 67.214 0.028077 4147000 16917 15682 14821 9315.4 10526 8682.6 14090 14038 7971.8 16137 TRUE FALSE 18212.17853 14903.25468 15315.12474 8554.302022 10112.69635 9013.022427 12239.96607 15872.8148 8665.172754 15610.45101 1.166665749 0.954697252 0.981081503 0.547985578 0.647815771 0.577371046 0.784087921 1.016806932 0.555087918 1 13.9302246 -5.618784604 6.732068465 0.726093199 1.038044836 0.412069993 0.166102991 0.210159285 12.45012254 0.045631592 0.079594917 2.41E-06 5.618784604 0.311951637 VELQELNDR ddPTM_A459_MK2206_30min_R1 3 VELQELNDR 9 0 P08670;B0YJC4;A0A1B0GTT5;P17661 P08670 VIM;DES Vimentin;Desmin 0 ;; 187.5 0.011965 39750000 6239.2 5983 6361.9 5114.2 6291.3 5343.4 6539.7 5452.7 5285.6 6113.2 FALSE TRUE 5708.523277 5593.505613 5930.071953 5508.09657 6040.704199 5645.93869 6103.448545 5405.027619 5835.057035 6870.549368 0.830868533 0.814127854 0.86311467 0.801696673 0.879217057 0.821759424 0.88834942 0.786695114 0.849285366 1 12.74620975 -11.49074963 1.862357084 1.141956178 0.837067642 0.708251277 0.031339435 436107.7365 144397.1701 266998.2657 0.007764072 3.23E-12 11.49074963 -0.304888536 VELQELNDR ddPTM_A459_MK2206_30min_R2 3 VELQELNDR 9 0 P08670;B0YJC4;A0A1B0GTT5;P17661 P08670 VIM;DES Vimentin;Desmin 0 ;; 153.97 0.013075 125065000 114496 120476 121043 135908 119853 108627 120728 98651 108257 121271 FALSE TRUE 123261.9018 114493.337 125078.5132 124803.8817 115146.969 112760.8766 104876.2686 111545.0244 117672.9982 117313.9372 1.050701261 0.975956819 1.066186305 1.063845308 0.981528468 0.961189091 0.893979616 0.950825001 1.003060685 1 16.84001489 -6.46152181 4.061574279 0.955508655 1.036282316 0.49161067 0.03694135 0.195932361 6.431788751 0.012442069 0.013797774 3.46E-07 6.46152181 0.080773662 VELS(ph)PGPPKPAGR ddPTM_A459_MK2206_30min_R1 1 VELSPGPPKPAGR 13 1 A0A087WXE2;Q8IZ73-2;Q8IZ73 A0A087WXE2 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 1 VELS(1)PGPPKPAGR 74.789 0.026644 35783000 7826.1 7793.4 7154.2 6519.3 7148.4 6143.7 6914.8 6496.2 6725 6084.5 TRUE FALSE 7160.449099 7286.048243 6668.592837 7021.417616 6863.664091 6491.550985 6453.526309 6439.404408 7424.087816 6838.293796 1.04711048 1.06547751 0.975183728 1.026779168 1.003710033 0.949293958 0.943733408 0.941668288 1.085663769 1 12.73942069 -5.252827202 1.032449039 0.982332186 1.072102132 0.220281175 0.043422697 1.386703859 1.977838693 0.015296887 0.115903652 5.59E-06 5.252827202 0.089769946 VELS(ph)PGPPKPAGR ddPTM_A459_MK2206_30min_R2 2 VELSPGPPKPAGR 13 1 A0A087WXE2;Q8IZ73-2;Q8IZ73 A0A087WXE2 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 1 VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR 138.2 0.0047483 89399000 185745 251944 225484 268715 237444 197952 236432 175044 208557 218394 TRUE FALSE 199965.78 239432.8273 233001.524 246760.1249 228120.7555 205485.2021 205388.1944 197922.8518 226696.9109 211267.8217 0.946503724 1.133314224 1.102872753 1.16799673 1.079770472 0.972628962 0.972169793 0.936833874 1.073030948 1 17.68871352 -6.711087951 5.782791669 0.985777783 1.095288725 0.359172647 0.062940632 0.196172834 14.46308643 0.020971415 0.020643769 1.94E-07 6.711087951 0.109510942 VEMPS(ph)FK ddPTM_A459_MK2206_30min_R1 1 VEMPSFK 7 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 VEMPS(1)FK 95.793 0.023561 8221800 2358.6 2358.5 2557.4 1528.5 2339.7 2042.1 2282.1 1836.1 1903.6 2048.9 TRUE FALSE 2157.988684 2204.961221 2383.810813 1646.225335 2246.504795 2157.721937 2129.865273 1820.047171 2101.486032 2302.7332 0.937142299 0.9575409 1.035209295 0.714900595 0.975581884 0.937026459 0.924929242 0.790385604 0.912605087 1 11.16913155 VEMYSGS(ph)DDDDDFNKLPK ddPTM_A459_MK2206_30min_R1 2 VEMYSGSDDDDDFNKLPK 18 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 VEMYS(0.076)GS(0.924)DDDDDFNKLPK;VEMY(0.001)S(0.312)GS(0.687)DDDDDFNKLPK 93.215 0.0025837 27331000 8339.3 10047.6 10281.2 10146 6448.8 6060.3 6424.2 7457.4 8788.2 7529.6 TRUE FALSE 7629.998744 9393.499414 9583.340789 10927.44668 6191.93064 6403.428949 5995.65334 7392.200738 9701.764839 8462.423694 0.901632797 1.110024711 1.132458163 1.291290424 0.731697072 0.756689712 0.70850309 0.873532336 1.146452268 1 13.0468552 -6.269986732 24.96555076 0.849467429 1.110621514 0.369450742 0.151849418 655.7405343 1915317.415 0.048983819 0.056400196 5.37E-07 6.269986732 0.261154085 VENMSSNQDGNDS(ph)DEFM ddPTM_A459_MK2206_30min_R1 3 VENMSSNQDGNDSDEFM 17 0 Q86WR0-2;Q86WR0 Q86WR0-2 CCDC25 Coiled-coil domain-containing protein 25 1 VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM 166.09 1.53E-06 13065700 3192.35 3872.91 3920.88 2998.58 4160.24 3619.42 3417.34 3460.95 2817.82 2867.37 TRUE FALSE 2920.823869 3620.782855 3654.74159 3229.531151 3994.528831 3824.348433 3189.375484 3430.691279 3110.742473 3222.601443 0.906355912 1.123559 1.134096678 1.002150346 1.239535481 1.18672709 0.989689709 1.064572005 0.965289232 1 11.65401006 -7.289830994 24.92945542 1.010268725 1.103482514 0.20418865 0.090226613 1231.533093 1081351.204 0.038497169 0.025959953 5.13E-08 7.289830994 0.093213789 VEPADSVESSPPSITHS(ph)PQNELK ddPTM_A459_MK2206_30min_R2 1 VEPADSVESSPPSITHSPQNELK 23 0 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 VEPADSVES(0.002)S(0.004)PPS(0.009)IT(0.005)HS(0.98)PQNELK 111.09 9.88E-06 6089000 16575 26357 16748 26886 33625 34139 41067 20095 22335 24433 TRUE FALSE 17843.99474 25048.14971 17306.36996 24689.3278 32304.71355 35438.18357 35674.85357 22721.4855 24277.65793 23635.75321 0.754957736 1.05975678 0.732211485 1.044575461 1.366773179 1.499346488 1.509359708 0.961318444 1.027158209 1 14.52868322 -6.01879362 5.192303 1.2509452 0.870498473 0.410552303 0.201902766 0.189087127 15.07515733 0.063785494 0.08833671 9.58E-07 6.01879362 -0.380446726 VEPAS(ph)PPYYSEK ddPTM_A459_MK2206_30min_R1 1 VEPASPPYYSEK 12 0 E7EU07;E7EUD1;A0A499FIV4;E9PFX5;A0A494C0D9;E9PFV2;P37231-3;P37231-2;P37231 E7EU07 PPARG Peroxisome proliferator-activated receptor gamma 1 VEPAS(1)PPYYSEK 122.45 0.0035396 6970300 4642 4308.8 4924 3618.8 4093.7 3968.9 4630.2 3890.7 4361 4040.6 TRUE FALSE 4247.173524 4028.296337 4589.772599 3897.520603 3930.63926 4193.615688 4321.327806 3856.68402 4814.341556 4541.180033 0.935257685 0.887059378 1.010700427 0.858261636 0.865554599 0.92346387 0.951586983 0.849269131 1.060152102 1 12.14885152 -8.271038669 24.99546481 1.030076064 0.911336267 0.495968758 0.048349134 615.4664843 1602585.97 0.043428776 0.011792348 5.36E-09 8.271038669 -0.118739797 VEPAS(ph)PPYYSEK ddPTM_A459_MK2206_30min_R2 1 VEPASPPYYSEK 12 0 E7EU07;E7EUD1;A0A499FIV4;E9PFX5;A0A494C0D9;E9PFV2;P37231-3;P37231-2;P37231 E7EU07 PPARG Peroxisome proliferator-activated receptor gamma 1 VEPAS(0.999)PPYYS(0.001)EK 118.76 0.004442 5870000 32141 35204 28047 31993 28387 27357 33412 28225 24599 29560 TRUE FALSE 34601.73967 33455.82055 28982.07298 29379.06956 27272.38375 28398.0898 29024.96426 31914.10441 26738.57656 28595.45962 1.210043137 1.169969673 1.013520096 1.027403299 0.95373126 0.993097862 1.015020029 1.116054955 0.93506371 1 14.80349847 -5.211175799 3.335938335 1.008343197 1.203538747 0.723056658 0.045639848 0.126799993 2.82694037 0.012100295 0.03714762 6.15E-06 5.211175799 0.19519555 VEPEVLSTDTQTS(ph)PEPGTR ddPTM_A459_MK2206_30min_R1 1 VEPEVLSTDTQTSPEPGTR 19 0 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 VEPEVLST(0.001)DT(0.007)QT(0.234)S(0.758)PEPGTR 157.7 2.74E-06 5317400 1656.1 1818.7 1696 1472.1 1400 1647.3 1546.9 1339.9 1510.1 1264.3 TRUE FALSE 1515.239998 1700.302299 1580.880245 1585.481397 1344.235035 1740.568702 1443.709123 1328.185396 1667.080299 1420.931029 1.066371251 1.196611422 1.112566489 1.115804613 0.946024126 1.224949464 1.016030401 0.934728969 1.173230977 1 10.47262081 -6.027674956 24.61372245 1.051019513 1.12930254 0.136568178 0.090737505 1158.11448 1030009.605 0.026076015 0.0337544 9.38E-07 6.027674956 0.078283027 VEPEVLSTDTQTS(ph)PEPGTR ddPTM_A459_MK2206_30min_R2 1 VEPEVLSTDTQTSPEPGTR 19 0 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 VEPEVLSTDTQT(0.008)S(0.992)PEPGTR 225.69 1.83E-20 5634100 18939 20845 19468 20175 18488 21064 23050 16539 16962 20617 TRUE FALSE 20388.9844 19809.86761 20117.0534 18526.63796 17762.06823 21865.60528 20023.50731 18700.70409 18437.3241 19944.26898 1.022297905 0.993261154 1.008663362 0.928920382 0.890585072 1.096335258 1.003972988 0.937648008 0.92444221 1 14.28368662 -5.649518431 18.39840887 0.969663025 1.00662313 0.098250574 0.054365123 4.540828054 724.8598672 0.015758229 0.027294093 2.24E-06 5.649518431 0.036960105 VEPEVLSTDTQTSPEPGT(ph)R ddPTM_A459_MK2206_30min_R1 1 VEPEVLSTDTQTSPEPGTR 19 0 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 VEPEVLSTDTQT(0.004)S(0.415)PEPGT(0.581)R 254.8 6.69E-38 5176300 1404.2 1537.9 1301.1 1100.4 1567.2 1060.3 1188.7 1352.6 1117.2 1305.2 TRUE FALSE 1284.765416 1437.78243 1212.784957 1185.152999 1504.775105 1120.33327 1109.403992 1340.774361 1233.336938 1466.89803 0.875838259 0.980151586 0.826768414 0.807931414 1.025821206 0.763743114 0.756292509 0.914020152 0.840778918 1 10.51855287 -5.271535044 24.81030317 0.859781271 0.927994926 0.06523099 0.089266816 1411.971059 3469953.552 0.023013011 0.048798768 5.35E-06 5.271535044 0.068213655 VEPGS(ph)LESSPGLGR ddPTM_A459_MK2206_30min_R1 1 VEPGSLESSPGLGR 14 0 Q92615;H0Y4V9 Q92615 LARP4B La-related protein 4B 1 VEPGS(0.56)LES(0.386)S(0.053)PGLGR 98.368 0.010443 4633800 2300.9 2200.7 2254.3 1822.7 2088.4 1742.4 2562.3 2497.4 1919.6 1687.7 TRUE FALSE 2105.196372 2057.43403 2101.284397 1963.08467 2005.214606 1841.053182 2391.373642 2475.565495 2119.149289 1896.785017 1.109876108 1.084695425 1.107813683 1.034953699 1.057164933 0.970617738 1.260751018 1.305137626 1.117232195 1 10.88934046 -7.268720752 24.99478542 1.196208344 1.062726931 0.260847299 0.086481889 648.9275841 2227564.662 0.034888421 0.024043929 5.39E-08 7.268720752 -0.133481413 VEPGSLES(ph)SPGLGR ddPTM_A459_MK2206_30min_R1 1 VEPGSLESSPGLGR 14 0 Q92615;H0Y4V9 Q92615 LARP4B La-related protein 4B 1 VEPGSLES(0.529)S(0.471)PGLGR 188.13 9.13E-05 15068000 2680.8 2625.8 2369.2 1514.3 2197.7 2187.4 2834.5 2048 2246.7 2250.2 TRUE FALSE 2452.783883 2454.859943 2208.385305 1630.931648 2110.160955 2311.248698 2645.415677 2030.094552 2480.252505 2528.971764 0.969873969 0.97069488 0.873234465 0.644899113 0.834394826 0.913908463 1.046043975 0.802735159 0.980735546 1 11.30433521 -6.926430567 5.555064506 0.946088541 0.85455756 0.165897608 0.103062338 0.442841189 24.24808134 0.039959263 0.035047382 1.18E-07 6.926430567 -0.091530982 VEPGSLES(ph)SPGLGR ddPTM_A459_MK2206_30min_R2 1 VEPGSLESSPGLGR 14 0 Q92615;H0Y4V9 Q92615 LARP4B La-related protein 4B 1 VEPGSLES(0.614)S(0.386)PGLGR 153.32 0.00036562 15114000 32322 34304 38659 38273 37923 36375 40500 30705 27356 41747 TRUE FALSE 34796.59717 32600.51324 39947.87177 35145.97347 36433.95247 37759.27611 35182.30135 34718.24893 29735.37543 40384.79881 0.861626112 0.807247138 0.989180903 0.870277295 0.902169964 0.934987352 0.871176839 0.859686069 0.73630119 1 15.30152473 -10.0036172 6.750577159 0.999999989 0.874490714 0.264739533 0.064506803 4.70E-11 0 0.063054643 0.015292997 9.92E-11 10.0036172 -0.125509275 VEPGSLESS(ph)PGLGR ddPTM_A459_MK2206_30min_R1 1 VEPGSLESSPGLGR 14 0 Q92615;H0Y4V9 Q92615 LARP4B La-related protein 4B 1 VEPGSLES(0.143)S(0.857)PGLGR 182.72 7.63E-05 10752000 2716.8 2474.4 2302.5 1699.8 2537.6 2083.7 2636.7 1852.1 2268.4 2144.3 TRUE FALSE 2485.721894 2313.31611 2146.212715 1830.718891 2436.522019 2201.677293 2460.810554 1835.907285 2504.208298 2409.952073 1.031440385 0.959901293 0.890562406 0.759649501 1.011025093 0.913577211 1.021103524 0.761802405 1.039111245 1 11.23478874 VEPGSLESS(ph)PGLGR ddPTM_A459_MK2206_30min_R2 1 VEPGSLESSPGLGR 14 0 Q92615;H0Y4V9 Q92615 LARP4B La-related protein 4B 1 VEPGSLES(0.403)S(0.596)PGLGR 153 0.00037177 13386000 38376 42928 41893 59897 53546 43020 45441 36738 34206 46012 TRUE FALSE 41314.09607 40796.25794 43289.69171 55003.2235 51443.51499 44657.15625 39474.54212 41539.78274 37181.17605 44510.63221 0.928184886 0.916550854 0.972569689 1.235732246 1.155757904 1.003291888 0.886856469 0.933255285 0.835332463 1 15.44186237 -7.124299107 4.690677178 0.909176666 1.0448121 0.26757224 0.09955933 0.343885621 11.637568 0.043794199 0.033713905 7.51E-08 7.124299107 0.135635434 VEPS(ph)SQSPGRSPR ddPTM_A459_MK2206_30min_R1 1 VEPSSQSPGRSPR 13 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 VEPS(0.492)S(0.492)QS(0.015)PGRSPR 116.79 0.017767 41553000 4447.2 3471.3 4204.3 4147.8 4645.5 3940.6 4193.4 4097.4 2646.2 1988.7 TRUE FALSE 4068.942287 3245.317739 3918.92383 4467.264275 4460.459898 4163.713367 3913.665937 4061.576864 2921.28196 2235.07517 1.820494604 1.451994896 1.75337451 1.998708739 1.995664378 1.862896346 1.751022064 1.817199224 1.30701732 1 11.12610764 -8.429186764 2.657799649 1.003360949 1.808745978 0.774213766 0.145450813 0.128966062 1.859573321 0.155446025 0.042283942 3.72E-09 8.429186764 0.80538503 VEPSS(ph)QSPGRSPR ddPTM_A459_MK2206_30min_R1 1 VEPSSQSPGRSPR 13 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 VEPS(0.062)S(0.681)QS(0.06)PGRS(0.197)PR 135.86 0.0053403 36003000 4025.4 3458.9 4175.6 4174.4 4743 3598.4 3823.9 4459.7 2475.8 2001.3 TRUE FALSE 3683.018592 3233.724981 3892.171906 4495.913011 4554.076267 3802.138298 3568.814608 4420.709313 2733.16827 2249.236153 1.637453047 1.437699184 1.730441644 1.998862149 2.024721264 1.690413118 1.586678483 1.965426933 1.215153983 1 11.13521943 -8.420194028 4.461067113 1.007139071 1.754575817 0.679700798 0.181281201 0.129042982 3.962670216 0.190656379 0.049863134 3.80E-09 8.420194028 0.747436745 VEPSSQS(ph)PGR ddPTM_A459_MK2206_30min_R1 1 VEPSSQSPGR 10 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 VEPSSQS(1)PGR 138.2 0.0016624 27334000 2804.5 2868.7 2636.2 2713.3 2688.1 2620.5 3010.3 2191.2 2186.6 2336.3 TRUE FALSE 2565.962548 2681.947109 2457.262089 2922.278836 2581.027285 2768.870445 2809.48838 2172.042569 2413.904895 2625.738482 0.97723462 1.021406788 0.935836568 1.112935982 0.982971953 1.054511127 1.069980274 0.827212072 0.919324187 1 11.35850752 -7.75240546 24.9999984 0.904951087 1.022011323 0.383307336 0.061533974 170.7460344 472516.879 0.028318823 0.016047839 1.77E-08 7.75240546 0.117060235 VEPSSQSPGRS(ph)PR ddPTM_A459_MK2206_30min_R1 2 VEPSSQSPGRSPR 13 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 VEPS(0.011)S(0.13)QS(0.071)PGRS(0.787)PR;VEPS(0.011)S(0.081)QS(0.037)PGRS(0.871)PR 161.94 0.0017255 25280000 7313.5 7213.1 7671.8 6852.1 9117.2 7474.9 7893.3 7828.2 5856.1 4919.3 TRUE FALSE 6691.44842 6743.525879 7151.059591 7379.849929 8754.042618 7898.122378 7366.752359 7759.758873 6464.862551 5528.740023 1.210302599 1.219722007 1.293433868 1.334815871 1.583370276 1.428557383 1.332446874 1.403531156 1.169319325 1 12.43273502 -8.504520873 3.368858578 1.001030649 1.353135706 0.548220152 0.102236889 0.176050367 4.90599808 0.110325731 0.029208721 3.13E-09 8.504520873 0.352105057 VEPSSQSPGRS(ph)PR ddPTM_A459_MK2206_30min_R2 3 VEPSSQSPGRSPR 13 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 VEPSSQS(0.015)PGRS(0.985)PR;VEPS(0.037)S(0.182)QS(0.182)PGRS(0.599)PR;VEPSSQSPGRS(1)PR 125.47 0.0048772 201087000 120263 189620 162365 207218 196407 180756 193798 157748 185328 162460 TRUE FALSE 129470.4277 180203.7465 167778.1681 190287.6265 188695.0743 187634.7962 168352.0898 178366.2052 201447.4944 157158.9435 0.82381839 1.146633736 1.067569967 1.210797313 1.200663927 1.193917394 1.071221822 1.134941488 1.281807385 1 17.26186485 -4.76108779 7.736518187 1.150346298 0.819123249 0.602092692 0.078307944 0.064831895 30.4767355 0.018860938 0.111954722 1.73E-05 4.76108779 -0.331223049 VEQALSEVASS(ph)LQSSAPK ddPTM_A459_MK2206_30min_R2 1 VEQALSEVASSLQSSAPK 18 0 Q86TV6;Q86TV6-2;H0YK02;H0YJS2;A0A0C4DGK5 Q86TV6 TTC7B Tetratricopeptide repeat protein 7B 1 VEQALSEVAS(0.084)S(0.916)LQSSAPK 197.41 2.40E-10 2842400 43688 41407 35473 39715 37670 33407 42329 34549 39482 40651 TRUE FALSE 47032.78687 39350.78859 36655.65212 36470.15746 36190.88652 34678.32679 36771.15145 39064.67292 42916.07299 39324.5612 1.196015555 1.000666947 0.932131243 0.927414225 0.920312533 0.881849046 0.935068322 0.993391197 1.09132999 1 15.26314305 -4.769110311 3.123239139 0.953935953 1.236876875 0.617703803 0.055207075 0.25686259 3.660356922 0.015095616 0.184252807 1.70E-05 4.769110311 0.282940922 VEQATKPS(ph)FESGR ddPTM_A459_MK2206_30min_R1 3 VEQATKPSFESGR 13 1 H3BT71;H0Y6E7;P38159;P38159-2 H3BT71;P38159 RBMX "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed" 1 VEQAT(0.005)KPS(0.769)FES(0.226)GR;VEQAT(0.065)KPS(0.935)FESGR;VEQAT(0.155)KPS(0.836)FES(0.009)GR 174.24 0.00061094 58170000 9722.5 10505.8 9617.6 8501.7 9746.8 8659 10779.2 8744.7 10354.2 9540.9 TRUE FALSE 8895.55032 9821.87051 8964.784108 9156.502407 9358.564317 9149.265097 10060.13924 8668.24601 11430.55614 10722.89872 0.829584476 0.915971582 0.836041106 0.853920441 0.872764404 0.853245501 0.938192134 0.808386448 1.065994974 1 13.38840734 -8.266716317 24.99969539 1.032997507 0.866481781 0.74381931 0.039755331 212.7388995 1007841.431 0.031869036 0.009197233 5.41E-09 8.266716317 -0.166515726 VEQIAAIAQELNELDYYDSHNVNTR ddPTM_A459_MK2206_30min_R1 2 VEQIAAIAQELNELDYYDSHNVNTR 25 0 O43707;O43707-2 O43707 ACTN4 Alpha-actinin-4 0 ; 225.56 1.30E-35 45158000 7487.1 7527.7 7053.6 4956.9 7486.5 7324.1 8546.8 7028.8 6981.3 7573.7 FALSE TRUE 6850.282829 7037.645362 6574.821284 5338.681297 7188.296852 7738.784213 7976.658567 6967.347943 7707.031118 8511.987135 0.804780684 0.826792293 0.772419082 0.627195649 0.844491038 0.909163053 0.937108861 0.818533655 0.905432656 1 13.05528025 -6.512706353 16.93163522 0.901113507 0.760278427 0.558310648 0.064992348 5.945445991 9896.665682 0.021402513 0.022774141 3.07E-07 6.512706353 -0.140835079 VEQIEAGT(ph)PGR ddPTM_A459_MK2206_30min_R2 1 VEQIEAGTPGR 11 0 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;Q16881-7;E2QRB9 Q16881 TXNRD1 "Thioredoxin reductase 1, cytoplasmic" 1 VEQIEAGT(1)PGR 116.9 0.013456 5139600 21732 24352 22689 27003 19671 22962 26893 22486 19987 21933 TRUE FALSE 23395.81863 23142.71509 23445.43994 24796.76852 18898.6177 23835.835 23361.9168 25424.99741 21725.43313 21217.32801 1.102675069 1.090745973 1.105013785 1.168703642 0.890716196 1.123413608 1.101077232 1.198312879 1.023947649 1 14.37295536 -8.503414857 24.30369493 0.999999932 1.095122071 0.168944387 0.076716537 808.0162881 1008934.388 0.073759671 0.019044665 3.14E-09 8.503414857 0.095122138 VEQMPQAS(ph)PGLAPR ddPTM_A459_MK2206_30min_R2 5 VEQMPQASPGLAPR 14 0 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR 190.18 9.55E-05 173881500 288463 334457 304428.7 361236 325421 313050 301862 263209 312451 269293 TRUE FALSE 310547.9491 317848.3517 314578.2009 331721.8633 312643.3364 324963.3371 262227.1568 297611.32 339627.4232 260505.9915 1.192095227 1.220119161 1.207566088 1.273375178 1.200138756 1.247431337 1.006607009 1.142435605 1.303722119 1 17.99095703 -7.19386385 24.99994798 1.125058072 1.223789903 0.300053982 0.081701466 252.8480918 93542.18027 0.030816542 0.023870387 6.40E-08 7.19386385 0.098731831 VERLS(ph)SGPEQITLEASSTEGHPGAPSPQHTDQTEAFQK ddPTM_A459_MK2206_30min_R2 1 VERLSSGPEQITLEASSTEGHPGAPSPQHTDQTEAFQK 38 1 Q6P996-4;H3BND4;Q6P996-3;Q6P996-5;Q6P996 Q6P996-4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 VERLS(0.468)S(0.31)GPEQIT(0.105)LEAS(0.036)S(0.034)T(0.034)EGHPGAPS(0.011)PQHT(0.002)DQTEAFQK 40.165 0.023781 13482000 14821 18397 13797 19080 13422 14585 20688 12282 14556 17871 TRUE FALSE 15955.70716 17483.43173 14256.98509 17521.10297 12894.98484 15140.0424 17971.64075 13887.29957 15822.05457 17287.87073 0.922942299 1.011312035 0.82468138 1.013491091 0.745897805 0.875760967 1.039552009 0.803297282 0.915211295 1 14.07747257 -5.246122401 24.86967441 0.897559805 0.967127158 0.07090738 0.092728242 1964.539643 3189745.488 0.022613882 0.059361642 5.67E-06 5.246122401 0.069567352 VERPPS(ph)PFSMAPQASLPPVPPR ddPTM_A459_MK2206_30min_R1 2 VERPPSPFSMAPQASLPPVPPR 22 1 A0A1B0GW38;A0A0U1RQX8;P22681 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 VERPPS(0.87)PFS(0.13)MAPQASLPPVPPR;VERPPS(1)PFSMAPQASLPPVPPR 125.03 1.75E-05 64555000 4649.02 5157.1 4860.58 3985.65 4880.47 4315.11 4837.52 4229.66 4589.1 4180.76 TRUE FALSE 4253.596436 4821.371853 4530.657372 4292.625454 4686.070545 4559.427799 4514.817867 4192.680529 5066.153367 4698.704112 0.90527012 1.026106717 0.964235513 0.913576457 0.997311266 0.970358569 0.960864477 0.892305714 1.078202255 1 12.19804721 -8.272902885 24.99706266 1.039101125 0.957417982 0.384632661 0.042981764 879.2518624 1917257.136 0.038458191 0.010286233 5.33E-09 8.272902885 -0.081683143 VERPPS(ph)PFSMAPQASLPPVPPR ddPTM_A459_MK2206_30min_R2 4 VERPPSPFSMAPQASLPPVPPR 22 1 A0A1B0GW38;A0A0U1RQX8;P22681 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 VERPPS(0.998)PFS(0.002)MAPQASLPPVPPR;VERPPS(0.995)PFS(0.005)MAPQASLPPVPPR;VERPPS(0.991)PFS(0.009)MAPQASLPPVPPR;VERPPS(0.946)PFS(0.054)MAPQASLPPVPPR 108.47 3.02E-05 57900900 105111.6 144194.4 111883.1 142579 140891.5 138698.9 151532.9 121004.9 125687.3 135492.8 TRUE FALSE 113159.0249 137033.9158 115613.2267 130929.8396 135359.3918 143977.1838 131636.4482 136820.6559 136619.3542 131071.681 0.863336947 1.045488352 0.882061066 0.998917833 1.032712717 1.098461412 1.004308842 1.043861304 1.04232549 1 16.99999649 -5.984093131 5.561842535 1.038800611 0.940946971 0.454721184 0.051765035 0.154747017 15.45373654 0.014071894 0.020403928 1.04E-06 5.984093131 -0.09785364 VES(ph)VEPSENEASK ddPTM_A459_MK2206_30min_R1 1 VESVEPSENEASK 13 0 Q9H307 Q9H307 PNN Pinin 1 VES(0.998)VEPS(0.001)ENEASK 183 1.27E-14 0 1057.9 1189.6 1301.6 639.34 717.21 594.61 1310.4 949.8 1881.2 2635.6 TRUE FALSE 967.9200497 1112.156824 1213.251018 688.5820776 688.642007 628.2763043 1222.985607 941.4959987 2076.757472 2962.118026 0.326766199 0.375459997 0.40958902 0.232462742 0.232482974 0.212103738 0.41287538 0.317845538 0.701105578 1 11.53241341 -8.465943583 2.144822246 1.000127908 0.309210595 0.911898827 0.069622889 0.08426791 0.854087361 0.071765109 0.019979147 3.42E-09 8.465943583 -0.690917314 down VES(ph)VEPSENEASK ddPTM_A459_MK2206_30min_R2 1 VESVEPSENEASK 13 0 Q9H307 Q9H307 PNN Pinin 1 VES(0.996)VEPS(0.004)ENEASK 172.82 8.09E-10 0 29168 14683 17193 15119 11592 9474.1 18546 13713 8454.6 21003 TRUE FALSE 31401.12451 13953.86357 17766.20604 13883.72934 11136.83983 9834.643514 16110.88792 15505.33618 9189.965826 20317.67383 1.545507855 0.686784505 0.874421264 0.683332622 0.548135575 0.484043774 0.792949432 0.763145246 0.452313877 1 14.31044762 -2.939290013 1.487088322 0.672500675 199.9999999 0.6874383 0.168691512 174.3815589 2.222126315 0.045922381 116954.7645 0.001150032 2.939290013 199.3274992 VESEES(ph)GDEEGKK ddPTM_A459_MK2206_30min_R2 1 VESEESGDEEGKK 13 1 B5MBZ8;Q15435-3;Q15435;H7C118;C9JRC4;C9JD73;H7C003 B5MBZ8 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 VESEES(1)GDEEGKK 166.03 0.00061566 7780300 47618 40237 41658 33321 29639 18743 46209 34610 25011 51564 TRUE FALSE 51263.67069 38238.88909 43046.85693 30598.56771 28475.22394 19456.278 40141.70279 39133.64583 27186.41157 49881.4709 1.027709684 0.766595058 0.86298291 0.61342553 0.570857744 0.390050206 0.804741762 0.784532716 0.545020247 1 15.60621639 -4.683029558 1.075005974 0.66163972 1.233594233 0.264654827 0.166584594 2.762623876 2.281823485 0.05308909 1.901862497 2.07E-05 4.683029558 0.571954514 VESGYFS(ph)LEK ddPTM_A459_MK2206_30min_R1 2 VESGYFSLEK 10 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 VES(0.024)GYFS(0.976)LEK;VESGYFS(1)LEK 166.11 0.00033625 72673000 11442.5 9289.6 8526.5 6872.4 7097.4 5407.8 7325.7 6835.1 7774.6 7412.9 TRUE FALSE 10469.25529 8684.845352 7947.744936 7401.713439 6814.695529 5713.984963 6837.015919 6775.341441 8582.797492 8331.266017 1.256622375 1.042440049 0.95396605 0.888426012 0.817966383 0.685848339 0.820645494 0.813242721 1.030191267 1 13.02432003 -4.771302287 1.078196851 0.844592854 1.463519247 0.619819012 0.094382209 1.151302671 1.07555103 0.030885435 0.825725017 1.69E-05 4.771302287 0.618926393 VESGYFS(ph)LEK ddPTM_A459_MK2206_30min_R2 4 VESGYFSLEK 10 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 VESGYFS(1)LEK;VESGYFS(1)LEK;VESGYFS(1)LEK;VESGYFS(1)LEK 140.45 0.0014164 47144100 158416 166331 165200 144000 127189 111767 166983 130892 119051 139609 TRUE FALSE 170544.4508 158071.2444 170707.6855 132234.7394 122194.9208 116020.3715 145057.9315 148000.0338 129405.8408 135053.5698 1.262791136 1.170433663 1.263999803 0.979128057 0.904788529 0.859069269 1.074076989 1.095861695 0.958181565 1 17.04317225 -5.76655085 24.99228948 0.981129752 1.226210767 0.728098038 0.070209187 69.87484167 341651.7375 0.021716893 0.033354953 1.71E-06 5.76655085 0.245081015 VESLESLYFT(ph)PIPAR ddPTM_A459_MK2206_30min_R1 1 VESLESLYFTPIPAR 15 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 VESLES(0.008)LYFT(0.992)PIPAR 114.21 0.0060161 7858000 1408.6 1924.6 1694.2 1564.5 1821.5 1253.7 1385.1 1783.4 1274.1 1173.7 TRUE FALSE 1288.791173 1799.30819 1579.202424 1684.998061 1748.945798 1324.683411 1292.702506 1767.807922 1406.547254 1319.106817 0.977018052 1.364035245 1.197175546 1.277378025 1.325856083 1.004227553 0.97998319 1.340155247 1.066287609 1 10.36534568 -6.761438245 25 1.093256207 1.236832089 0.227808651 0.136369336 0.080059098 1107813.336 0.046202715 0.043399918 1.73E-07 6.761438245 0.143575882 VESLESLYFT(ph)PIPAR ddPTM_A459_MK2206_30min_R2 1 VESLESLYFTPIPAR 15 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 VESLES(0.042)LYFT(0.957)PIPAR 94.717 0.036236 0 2465.1 3994.8 4035.8 4612.2 4415.2 3542.6 3744.8 2521.8 2163.8 4046.7 TRUE FALSE 2653.829951 3796.424041 4170.351558 4235.368506 4241.837063 3677.416125 3253.103262 2851.407919 2352.003413 3914.65651 0.677921535 0.969797486 1.065317365 1.081925961 1.083578355 0.939396883 0.831006055 0.728392877 0.600819869 1 11.93467001 -7.34260175 2.649629874 0.752195094 0.987194928 0.271069431 0.143764224 0.339065818 4.652592406 0.070543095 0.044485635 4.54E-08 7.34260175 0.234999834 VET(ph)GVLKPGMVVTFAPVNVTTEVK ddPTM_A459_MK2206_30min_R1 1 VETGVLKPGMVVTFAPVNVTTEVK 24 1 P68104;A0A087WVQ9;Q5VTE0 P68104 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 1 VET(1)GVLKPGMVVTFAPVNVTTEVK 83.332 0.00020839 32906000 2493 2839.6 2605.8 2979.4 2216.8 2132.6 1819.9 2008.8 2109.8 2087.8 TRUE FALSE 2280.957259 2654.741524 2428.925556 3208.873904 2128.500162 2253.345969 1698.497792 1991.237273 2329.12126 2346.452426 0.972087579 1.13138519 1.035148009 1.367542708 0.907114135 0.96032033 0.723857758 0.848616086 0.992613886 1 11.19626549 -6.478919829 24.89494911 0.889785045 1.122480127 0.440799043 0.121368393 392.2694353 222151.1935 0.037392603 0.042396604 3.32E-07 6.478919829 0.232695082 VET(ph)PSHPGGVSEEFWER ddPTM_A459_MK2206_30min_R2 1 VETPSHPGGVSEEFWER 17 0 Q92620;H3BQT9 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 1 VET(0.995)PS(0.005)HPGGVSEEFWER 97.129 0.007748 2936400 9509.7 15280 12581 15326 15313 14394 14584 9391.4 8825.7 13175 TRUE FALSE 10237.76994 14521.21742 13000.44426 14073.81677 14711.73468 14941.77376 12669.10328 10618.88823 9593.343433 12745.10083 0.803271004 1.13935681 1.020034634 1.104253074 1.154305084 1.1723543 0.994037117 0.833174125 0.75270832 1 13.63765517 -7.625461499 4.026061862 0.8455714 1.073468454 0.383038365 0.114327745 0.208863438 6.247619625 0.057123584 0.031235643 2.37E-08 7.625461499 0.227897054 VETGVLKPGMVVTFAPVNVT(ph)TEVK ddPTM_A459_MK2206_30min_R2 1 VETGVLKPGMVVTFAPVNVTTEVK 24 1 P68104;A0A087WVQ9;Q5VTE0 P68104 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 1 VETGVLKPGMVVT(0.002)FAPVNVT(0.61)T(0.388)EVK 57.845 0.0164 4390200 17742 21881 25541 24272 19773 20434 28840 22454 20187 22646 TRUE FALSE 19100.34116 20794.42136 26392.52419 22288.89996 18996.61267 21211.63019 25053.27336 25388.8149 21942.82877 21907.06287 0.87188051 0.949210831 1.204749552 1.017429862 0.867145577 0.968255321 1.143616262 1.158932854 1.001632619 1 14.41910845 -7.247872226 24.06081982 1.08928984 0.985206847 0.174502404 0.10052845 850.8654263 1508978.649 0.041183625 0.031697082 5.65E-08 7.247872226 -0.104082992 VETGVLKPGMVVTFAPVNVTT(ph)EVK ddPTM_A459_MK2206_30min_R2 2 VETGVLKPGMVVTFAPVNVTTEVK 24 1 P68104;A0A087WVQ9;Q5VTE0 P68104 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 1 VETGVLKPGMVVT(0.001)FAPVNVT(0.277)T(0.722)EVK;VETGVLKPGMVVTFAPVNVT(0.319)T(0.681)EVK 99.753 8.74E-06 4944700 51576 65900 52475 56085 54902 37387 69602 59328 47731 69656 TRUE FALSE 55524.69822 62627.50183 54224.49031 51502.67609 52746.27162 38809.78848 60463.17379 67082.3733 51882.5561 67383.13042 0.824014822 0.929424048 0.804719074 0.764325964 0.782781555 0.575957042 0.897304317 0.995536611 0.769963577 1 16.04009983 -10.74439018 6.247677762 1.000002503 0.81712146 0.208784263 0.107436121 3.98E-06 4.96E-07 0.110491571 0.026797775 1.80E-11 10.74439018 -0.182881043 VETGVLKPGMVVTFAPVNVTTEVK ddPTM_A459_MK2206_30min_R1 5 VETGVLKPGMVVTFAPVNVTTEVK 24 1 P68104;A0A087WVQ9;Q5VTE0 P68104 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 0 ;;;; 218.95 7.46E-34 95489200 18854.9 19225 19965.11 20064.1 19659.8 17802.81 17546.8 19384.2 16607.7 15975.6 FALSE TRUE 17251.19174 17973.44901 18609.93396 21609.44046 18876.70854 18810.78972 16376.28499 19214.72598 18334.12985 17954.77794 0.960813428 1.001039894 1.03648923 1.203548188 1.051347368 1.047675988 0.912085075 1.070173413 1.021128187 1 14.13208019 -7.031604243 24.90688894 1.002863893 1.054990779 0.108036807 0.068788159 1584.32809 1248584.148 0.028039779 0.02174232 9.30E-08 7.031604243 0.052126886 VETGVLKPGMVVTFAPVNVTTEVK ddPTM_A459_MK2206_30min_R2 1 VETGVLKPGMVVTFAPVNVTTEVK 24 1 P68104;A0A087WVQ9;Q5VTE0 P68104 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 0 102.66 8.08E-06 3094300 19362 21335 24438 22987 23097 20350 22455 20268 19186 25798 FALSE TRUE 20844.36961 20275.53492 25252.75072 21108.88857 22190.09573 21124.43351 19506.63153 22917.09719 20854.7636 24956.21337 0.835237674 0.812444365 1.011882305 0.845836997 0.889161164 0.846459885 0.781634266 0.918292244 0.835654163 1 14.60711143 -10.66961814 3.510420579 1.000133991 0.865750601 0.308689447 0.060980148 86713728.14 142254595 133040.8596 0.015243628 2.14E-11 10.66961814 -0.13438339 VETVSQPSES(ph)PKDTIDK ddPTM_A459_MK2206_30min_R2 2 VETVSQPSESPKDTIDK 17 1 F8VXG7;A0A0A0MTP7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 VET(0.008)VS(0.01)QPS(0.002)ES(0.98)PKDTIDK;VETVS(0.003)QPS(0.089)ES(0.906)PKDT(0.003)IDK 102.61 0.001932 22808000 135182 59146 85909 53958 57983 29108 87593 72873 40188 103528 TRUE FALSE 145531.6379 56208.89565 88773.16318 49549.4588 55706.29608 30215.72534 76091.93388 82397.75131 43683.4796 100149.8898 1.453138272 0.561247703 0.886403004 0.494753003 0.55622923 0.301705028 0.759780505 0.822744303 0.436181005 1 16.61180131 -3.435403047 10.6632889 0.699983538 0.836848478 0 0.319515271 0 0 0.070760595 0 0.000366942 3.435403047 0.136864941 VEVAHIS(ph)GGE ddPTM_A459_MK2206_30min_R1 1 VEVAHISGGE 10 0 O95625 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 1 VEVAHIS(1)GGE 92.538 0.026484 6182000 2727.7 2992.2 3275 2890.2 2956.6 2836.7 2886.5 2796.9 2702.5 2615.2 TRUE FALSE 2495.694791 2797.407236 3052.702125 3112.803705 2838.832361 2997.311503 2693.946852 2772.446998 2983.434546 2939.19072 0.84910951 0.951761047 1.038619952 1.059068295 0.965855105 1.019774417 0.91656075 0.943268832 1.015053064 1 11.52120326 -4.827006 3.411771379 0.992296077 0.837933592 0.532993895 0.041136233 0.232751702 4.466320282 0.011287501 0.087712856 1.49E-05 4.827006 -0.154362485 VEVAHIS(ph)GGE ddPTM_A459_MK2206_30min_R2 1 VEVAHISGGE 10 0 O95625 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 1 VEVAHIS(1)GGE 82.029 0.043637 10664000 23330 32133 27250 34313 33659 25407 30266 25406 25140 29817 TRUE FALSE 25116.16274 30537.32195 28158.5014 31509.51814 32337.37854 26373.88119 26292.03784 28726.65143 27326.63176 28844.07373 0.870756432 1.058703505 0.976231779 1.092408736 1.121109967 0.914360483 0.911523042 0.995929067 0.947391551 1 14.81598731 -6.795856532 24.99999916 0.950941536 1.02694329 0.200587446 0.069615401 294.7684651 214112.5119 0.024892948 0.02195453 1.60E-07 6.795856532 0.076001754 VEVERDNLAEDIMR ddPTM_A459_MK2206_30min_R1 2 VEVERDNLAEDIMR 14 1 P08670;B0YJC4 P08670 VIM Vimentin 0 ; 170 0.00047152 15870100 5528 4899.6 6143.2 7007.7 8332.5 6166.3 4312.3 7672.7 2751.2 2178.62 FALSE TRUE 5057.814571 4580.635149 5726.2167 7547.434268 8000.598881 6515.430577 4024.634335 7605.618393 3037.197085 2448.523893 2.065658655 1.870774127 2.338640319 3.082442564 3.267519219 2.660962629 1.643698208 3.106205503 1.240419623 1 11.25769656 -8.372849344 5.822894333 1.028364883 2.496819683 0.534699763 0.517712529 0.192996939 8.295060941 0.532233673 0.138305078 4.24E-09 8.372849344 1.468454801 VEVGKDQEFTVDTR ddPTM_A459_MK2206_30min_R2 1 VEVGKDQEFTVDTR 14 1 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 0 99.991 0.026221 10174000 66389 91734 79593 82997 76188 70403 94027 62362 74277 75857 FALSE TRUE 71471.79288 87178.62295 82246.59089 76215.87961 73196.47631 73082.2355 81681.14195 70512.92752 80737.4792 73381.7923 0.973971753 1.188014359 1.12080379 1.038621124 0.997474632 0.995917832 1.113098214 0.960904951 1.100238583 1 16.16313452 -5.829600497 6.106982259 1.027978741 1.103451017 0.163679013 0.066316454 0.305229323 20.38445625 0.017914096 0.027067037 1.48E-06 5.829600497 0.075472276 VEVKEEEESSSNGTASQSTS(ph)PSQPR ddPTM_A459_MK2206_30min_R1 2 VEVKEEEESSSNGTASQSTSPSQPR 25 1 Q92793-2;Q92793;I3L466 Q92793-2 CREBBP CREB-binding protein 1 VEVKEEEESSS(0.001)NGT(0.027)AS(0.027)QS(0.114)T(0.114)S(0.565)PS(0.151)QPR;VEVKEEEESSSNGT(0.003)AS(0.02)QS(0.067)T(0.067)S(0.609)PS(0.234)QPR 71.296 0.00052201 8692300 1157.13 1195.92 1304.33 1083.48 1293.69 1117.98 1413.3 1463.43 1191.1 1027.97 TRUE FALSE 1058.710017 1118.065391 1215.795714 1166.929817 1242.159588 1181.279061 1319.021336 1450.635386 1314.919107 1155.322684 0.916376032 0.967751612 1.052342978 1.010046659 1.075162467 1.022466777 1.141690848 1.25561058 1.138140128 1 10.17408014 -5.988576507 0.619845682 1.144574086 0.922296261 0.463087349 0.068710583 0.967944328 0.696223124 0.045550684 0.127590258 1.03E-06 5.988576507 -0.222277825 VEVKEEEESSSNGTASQSTS(ph)PSQPR ddPTM_A459_MK2206_30min_R2 2 VEVKEEEESSSNGTASQSTSPSQPR 25 1 Q92793-2;Q92793;I3L466 Q92793-2 CREBBP CREB-binding protein 1 VEVKEEEESSSNGT(0.004)AS(0.004)QS(0.021)T(0.033)S(0.851)PS(0.086)QPR;VEVKEEEESSSNGT(0.023)AS(0.007)QS(0.054)T(0.249)S(0.593)PS(0.075)QPR 108.69 1.31E-07 9491100 23707.8 29514 26969 29662 29414 27923 38304 33172 32377 34077 TRUE FALSE 25522.8874 28048.37768 27868.133 27238.51972 28259.05857 28985.62933 33274.63879 37507.6943 35193.09294 32965.07028 0.774240345 0.850851445 0.845383697 0.826284291 0.857242479 0.879283104 1.009390804 1.137801132 1.067587378 1 15.00865054 -7.280853683 2.307947927 1.078127276 0.833565944 0.883555689 0.038810344 0.091177049 0.952255711 0.018290766 0.011805606 5.24E-08 7.280853683 -0.244561332 VEVS(ph)EDEPASK ddPTM_A459_MK2206_30min_R2 2 VEVSEDEPASK 11 0 O75683 O75683 SURF6 Surfeit locus protein 6 1 VEVS(1)EDEPASK;VEVS(1)EDEPASK 158.25 0.00056162 27694000 170223 162409 151581 153930 158095 131049 187430 135901 120291 182713 TRUE FALSE 183255.4038 154344.0052 156634.6349 141353.4266 151887.3959 136036.1615 162820.2159 153663.7273 130753.6937 176751.0898 1.036799286 0.873228026 0.886187661 0.79973157 0.859329332 0.769648219 0.92118366 0.869379236 0.73976174 1 17.43135958 -4.36776976 1.609243859 0.847494821 1.376147098 0.360254451 0.071268195 3.51671403 3.602072999 0.01850155 4.046980057 4.29E-05 4.36776976 0.528652277 VEVTEFEDIK ddPTM_A459_MK2206_30min_R1 2 VEVTEFEDIK 10 0 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105 Q01105-2;Q01105 SET;SETSIP Protein SET;Protein SETSIP 0 ; 176.83 0.0010229 13487100 4736 5323.2 5319.7 5406.3 4675.6 4196.8 4510.3 4963.6 5087.9 4894.1 FALSE TRUE 4333.17833 4976.658712 4958.613586 5822.694163 4489.360951 4434.419189 4209.426117 4920.203769 5616.805412 5500.418057 0.787790725 0.904778266 0.901497583 1.058591202 0.816185407 0.806196755 0.765292033 0.894514511 1.021159729 1 12.42532556 -8.198928708 4.776399908 1.01109825 0.867370104 0.34816276 0.079209631 0.250770562 11.35355597 0.064199972 0.0220678 6.33E-09 8.198928708 -0.143728146 VEVTEFEDIK ddPTM_A459_MK2206_30min_R2 3 VEVTEFEDIK 10 0 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105 Q01105-2;Q01105 SET;SETSIP Protein SET;Protein SETSIP 0 ;; 161.76 0.0058172 9354100 64865 76517 69241 65184 72214 52110 76185 57825 45381 70382 FALSE TRUE 69831.11427 72717.27705 71549.46038 59858.25869 69378.51551 54093.08257 66181.81799 65382.92604 49328.15735 68085.4411 1.025639449 1.068029756 1.050877533 0.879163852 1.018991937 0.794488244 0.972040673 0.960307005 0.724503749 1 16.05505872 -5.754412037 24.88338396 0.908096425 1.050167048 0.355032161 0.087137975 164.5717267 582730.9529 0.022817073 0.038457716 1.76E-06 5.754412037 0.142070624 VEVTS(ph)PNLDVSLPSMEVDIQAPGAK ddPTM_A459_MK2206_30min_R2 1 VEVTSPNLDVSLPSMEVDIQAPGAK 25 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 VEVT(0.175)S(0.825)PNLDVSLPSMEVDIQAPGAK 138.36 8.21E-10 0 5236.8 4579.8 5605.6 4368.2 3019.2 2443.1 3995.2 2682 2968.8 4449.4 TRUE FALSE 5637.733434 4352.373792 5792.487906 4011.304087 2900.651038 2536.073882 3470.625441 3032.546609 3227.020858 4304.216442 1.309816435 1.011188413 1.345770591 0.931947578 0.673909195 0.589206866 0.806331533 0.704552536 0.749734801 1 12.07153491 -5.976095268 4.430476482 0.736954811 1.199043686 0.71652135 0.131047114 0.10002737 4.724353588 0.036283323 0.053195939 1.06E-06 5.976095268 0.462088874 VEYISS(ph)PLK ddPTM_A459_MK2206_30min_R2 1 VEYISSPLK 9 0 Q15697 Q15697 ZNF174 Zinc finger protein 174 1 VEYIS(0.276)S(0.724)PLK 99.973 0.01833 4682000 28042 42529 42456 38720 32326 32338 31725 27935 39093 40934 TRUE FALSE 30188.91708 40417.0717 43871.46185 35556.45214 31056.71881 33568.64525 27559.46939 31586.20042 42493.23848 39598.32693 0.762378601 1.020676247 1.107912007 0.897928142 0.784293712 0.847728878 0.695975601 0.797665024 1.073106916 1 15.27315186 -4.710769262 23.10574572 0.900230058 0.762372674 0.102656774 0.128810679 19496.93316 8888657.817 0.034861863 30.67342494 1.95E-05 4.710769262 -0.137857384 VFCVEEEDS(ph)ESSLQK ddPTM_A459_MK2206_30min_R1 3 VFCVEEEDSESSLQK 15 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VFCVEEEDS(1)ESSLQK;VFCVEEEDS(0.994)ES(0.006)SLQK;VFCVEEEDS(0.999)ESSLQK 220.14 6.58E-40 4354700 2850.63 2509.89 2620.01 2517.5 2353.95 1746.47 2354.47 2569.55 1960.89 2313.15 TRUE FALSE 2608.168949 2346.495705 2442.171021 2711.398286 2260.187187 1845.353622 2197.407602 2547.084695 2164.731533 2599.720485 1.003249759 0.902595382 0.939397537 1.042957618 0.869396229 0.709827704 0.845247639 0.979753289 0.832678569 1 11.3441408 -6.388207816 8.922481245 0.861650447 0.96459067 0.246666591 0.083288571 0.474355373 32.0926307 0.026616318 0.030172172 4.09E-07 6.388207816 0.102940223 VFCVEEEDS(ph)ESSLQK ddPTM_A459_MK2206_30min_R2 1 VFCVEEEDSESSLQK 15 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VFCVEEEDS(0.604)ES(0.198)S(0.198)LQK 119.96 0.0020884 0 1291.6 4369.3 3626.6 3298.9 3448.3 3544.5 4223.6 2147.8 2463.3 3456.5 TRUE FALSE 1390.485889 4152.326916 3747.509034 3029.369317 3312.902416 3679.388431 3669.036247 2428.524835 2677.553381 3343.714688 0.415850639 1.24183051 1.120762201 0.905989177 0.990785017 1.100389469 1.097293456 0.726295471 0.800772085 1 11.70723604 -7.761787195 24.99999774 0.822650339 0.999171452 0.072103043 0.219948421 20.5413838 1476031.635 0.107931063 0.056904511 1.73E-08 7.761787195 0.176521113 VFDDES(ph)DEKEDEEYADEK ddPTM_A459_MK2206_30min_R1 3 VFDDESDEKEDEEYADEK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VFDDES(0.993)DEKEDEEY(0.007)ADEK;VFDDES(0.96)DEKEDEEY(0.04)ADEK;VFDDES(0.594)DEKEDEEY(0.406)ADEK 74.703 0.0088257 106205000 3973.11 6426.6 7328.1 4041.2 2368.78 2898.88 5137.2 4186.72 8789.6 10537.4 TRUE FALSE 3635.176131 6008.227172 6830.688989 4352.453924 2274.426477 3063.01208 4794.506761 4150.115948 9703.310374 11842.85267 0.306951056 0.507329386 0.576777334 0.367517358 0.192050559 0.25863803 0.404843909 0.350432118 0.819338942 1 13.53172901 -8.378187052 3.217896666 0.993625403 0.371778511 0.80715619 0.106900408 0.11042145 2.059719426 0.114954017 0.030933202 4.19E-09 8.378187052 -0.621846891 down VFDDES(ph)DEKEDEEYADEK ddPTM_A459_MK2206_30min_R2 2 VFDDESDEKEDEEYADEK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VFDDES(0.782)DEKEDEEY(0.218)ADEK;VFDDES(0.994)DEKEDEEY(0.006)ADEK 64.588 0.019258 117669000 110217 66070 92854 53084 45659 24461.9 83932 56961 40302 125064 TRUE FALSE 118655.2983 62789.05987 95949.70602 48746.86739 43866.19824 25392.81475 72911.62758 64405.99828 43807.39511 120983.1719 0.980758699 0.518990029 0.793083075 0.402922709 0.36258099 0.209887163 0.602659249 0.532355015 0.362094946 1 16.88444687 -10.41858867 12.13649742 1 0.521131584 0.304685284 0.21290124 0 0 0.211260216 0.051238128 3.81E-11 10.41858867 -0.478868416 VFDDES(ph)DEKEDEEYADEKGLEAADK ddPTM_A459_MK2206_30min_R1 2 VFDDESDEKEDEEYADEKGLEAADK 25 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VFDDES(0.925)DEKEDEEY(0.075)ADEKGLEAADK;VFDDES(0.535)DEKEDEEY(0.465)ADEKGLEAADK 53.355 0.0070327 21888000 4118.29 6165 6063.1 5255.98 2273.84 2053.17 3407.03 3729.32 4739.79 3687.56 TRUE FALSE 3768.007809 5763.657379 5651.553665 5660.79649 2183.268138 2169.418711 3179.753245 3696.714948 5232.508132 4144.402772 0.909179927 1.390708793 1.363659368 1.365889563 0.526799218 0.523457499 0.767240401 0.891977723 1.262548169 1 12.0169485 -6.246799891 24.97204115 0.804937227 1.274477249 0.430983689 0.240064076 760.8734348 1297897.712 0.075220405 0.096675869 5.67E-07 6.246799891 0.469540022 VFDDES(ph)DEKEDEEYADEKGLEAADK ddPTM_A459_MK2206_30min_R2 1 VFDDESDEKEDEEYADEKGLEAADK 25 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VFDDES(0.94)DEKEDEEY(0.06)ADEKGLEAADK 48.641 0.018045 14310000 15449 21517 19914 15054 17395 8656.2 24883 15888 13539 24166 TRUE FALSE 16631.78732 20448.49707 20577.92282 13824.04004 16711.9849 8985.617757 21615.83221 17964.61615 14716.59775 23377.4654 0.711445276 0.874709757 0.880246103 0.591340413 0.714875826 0.384370915 0.924643961 0.768458678 0.629520673 1 14.5128309 -9.782629509 9.635325836 0.999987108 0.722867085 0.233532243 0.152119574 0 0 0.150196398 0.036427977 1.65E-10 9.782629509 -0.277120023 VFDDESDEKEDEEY(ph)ADEKGLEAADK ddPTM_A459_MK2206_30min_R2 1 VFDDESDEKEDEEYADEKGLEAADK 25 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VFDDES(0.272)DEKEDEEY(0.728)ADEKGLEAADK 53.355 0.026362 14930000 23026 33333 30470 23159 34278 14371 32573 23481 22828 42934 TRUE FALSE 24788.88826 31677.73169 31485.85459 21266.83562 32932.07349 14917.89848 28296.12597 26550.04732 24813.53818 41533.0671 0.596847043 0.76271111 0.758091246 0.512045873 0.792912149 0.359181238 0.681291509 0.639250823 0.597440543 1 15.34197279 -10.59255766 4.863828165 1.000010886 0.635435252 0.442147907 0.123545065 1.41E-05 2.70E-06 0.1159511 0.028121433 2.56E-11 10.59255766 -0.364575634 VFDKDGNGY(ph)ISAAELR ddPTM_A459_MK2206_30min_R2 1 VFDKDGNGYISAAELR 16 1 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2 P0DP25 CALM2;CALM1 1 VFDKDGNGY(0.941)IS(0.059)AAELR 123.68 0.01226 4419500 10224 14447 11142 13200 14567 9377.8 11225 11755 12674 13518 TRUE FALSE 11006.7573 13729.58299 11513.46872 12121.51778 13995.02639 9734.67875 9751.144016 13291.41886 13776.36161 13076.90877 0.841694126 1.049910436 0.880442689 0.926940609 1.070209071 0.744417425 0.745676535 1.016403731 1.053487629 1 13.67473392 -7.962082558 24.9983386 1.029478336 0.900423982 0.248071199 0.102691281 235.0001379 154931.4647 0.058948591 0.028317896 1.09E-08 7.962082558 -0.129054355 VFDKDGNGYIS(ph)AAELR ddPTM_A459_MK2206_30min_R1 1 VFDKDGNGYISAAELR 16 1 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2 P0DP25 CALM2;CALM1 1 VFDKDGNGY(0.004)IS(0.996)AAELR 58.626 0.043804 2702100 1149.4 1312.4 1416.8 954.77 1327 1307.2 1418.5 1044.1 1264.9 966.92 TRUE FALSE 1051.637494 1226.962521 1320.631563 1028.306551 1274.14278 1381.212534 1323.874453 1034.971544 1396.390881 1086.709349 0.967726554 1.129062267 1.215257386 0.946257204 1.172477977 1.271004556 1.218241523 0.952390392 1.284971812 1 10.08575041 VFDKDGNGYISAAELR ddPTM_A459_MK2206_30min_R1 1 VFDKDGNGYISAAELR 16 1 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2 P0DP25 CALM2;CALM1 0 130.47 0.0022094 33805000 3357.6 3467.3 3297.3 3752.8 3638.5 3145.3 3238.3 3575.2 2843.7 2383.8 FALSE TRUE 3072.018489 3241.57814 3073.488463 4041.841306 3493.57084 3323.384168 3022.278916 3543.942403 3139.312791 2679.123141 1.146650724 1.209939958 1.147199401 1.508643349 1.303997859 1.240474586 1.128085107 1.32279937 1.171768757 1 11.38754518 -8.572373359 6.683278083 1.000004609 1.25189425 0.340671538 0.10626582 0.667448119 88.37804653 0.106582191 0.027587809 2.68E-09 8.572373359 0.251889641 VFDKDGNGYISAAELR ddPTM_A459_MK2206_30min_R2 1 VFDKDGNGYISAAELR 16 1 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2 P0DP25 CALM2;CALM1 0 122.33 0.0040987 35228000 51399 59135 59344 64720 62019 55682 70242 43543 55598 59529 FALSE TRUE 55334.14696 56198.44189 61322.49934 59432.16897 59583.82244 57801.01753 61019.14102 49234.21961 60433.81354 57586.57361 0.960886253 0.975894872 1.064874944 1.032049057 1.034682543 1.003723853 1.059607079 0.854960046 1.049442774 1 15.81344486 -9.798472399 6.358279508 1.000000001 1.003945784 0.000407588 0.059542285 0 3.08E-18 0.057127989 0.013855572 1.59E-10 9.798472399 0.003945783 VFDLQFST(ph)DSPR ddPTM_A459_MK2206_30min_R2 1 VFDLQFSTDSPR 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 VFDLQFS(0.086)T(0.908)DS(0.006)PR 108.23 0.016859 0 6017.4 6210.4 5902.2 6419.1 6790.6 5865.5 7061.4 4491.6 5667.8 6001.7 TRUE FALSE 6478.096771 5902.000567 6098.976402 5894.638996 6523.966924 6088.715713 6134.229698 5078.667542 6160.774999 5805.865021 1.115784943 1.01655835 1.050485394 1.015290396 1.123685601 1.048718096 1.056557408 0.874747781 1.061129561 1 12.50329532 -7.582072426 24.99998381 0.973893271 1.059286664 0.325184925 0.054232256 82.01081072 34635.45454 0.023828109 0.013757166 2.62E-08 7.582072426 0.085393393 VFDLQFSTDS(ph)PR ddPTM_A459_MK2206_30min_R1 2 VFDLQFSTDSPR 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 VFDLQFS(0.001)T(0.014)DS(0.986)PR;VFDLQFS(0.003)T(0.332)DS(0.665)PR 121.92 0.0036681 4810500 1366.44 900.93 934.85 973.53 1083.26 1079.45 1198.52 991.71 1016.67 818.23 TRUE FALSE 1250.217103 842.2792932 871.3949866 1048.511449 1040.11146 1140.567526 1118.568918 983.039584 1122.356485 919.5985097 1.359524933 0.915920681 0.947581991 1.140183937 1.131049528 1.240288576 1.216366605 1.068987796 1.220485324 1 9.844860318 -5.970306057 24.59326687 1.155836862 1.056064032 0.050317185 0.130734347 395.2215715 327329.1387 0.036040891 0.053456344 1.07E-06 5.970306057 -0.099772831 VFDMLNRR ddPTM_A459_MK2206_30min_R1 1 VFDMLNRR 8 1 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;J3KSZ0;J3QR64;Q14240-2;Q14240;E7EQG2;J3QLN6;J3KS25;J3QKZ9 P60842 EIF4A1;EIF4A2 "Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed" 0 99.442 0.024566 0 3891.2 3397.8 3869.8 4091.4 4580.3 3351.8 3286.3 4257.5 2274.5 1674.3 FALSE TRUE 3560.233006 3176.602602 3607.128758 4406.520337 4397.856952 3541.576019 3067.076923 4220.277126 2510.942414 1881.724924 1.892005022 1.688133351 1.916926704 2.341745215 2.337141255 1.88209019 1.629928415 2.242770488 1.334383353 1 10.87784003 -8.445201825 4.205008801 1.005880788 1.984221077 0.668508655 0.237258952 0.125989684 3.98084641 0.246888697 0.06467616 3.59E-09 8.445201825 0.978340289 VFGS(ph)LER ddPTM_A459_MK2206_30min_R1 1 VFGSLER 7 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 VFGS(1)LER 82.426 0.041183 14809000 2747.6 3007.1 2776.7 2796.1 2947 2446.6 2785.5 2572.5 2690.2 2228.8 TRUE FALSE 2513.902192 2811.337243 2588.22534 3011.456106 2829.61475 2585.124378 2599.684377 2550.008904 2969.855917 2504.920571 1.003585591 1.122325904 1.033256452 1.202216207 1.129622545 1.032018503 1.037831063 1.017999905 1.185608818 1 11.29054914 -6.765283394 24.96389083 1.054762866 1.101712147 0.088860733 0.06920631 248.0582093 1610935.022 0.023809857 0.021784461 1.72E-07 6.765283394 0.046949282 VFGS(ph)LER ddPTM_A459_MK2206_30min_R2 1 VFGSLER 7 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 VFGS(1)LER 95.775 0.043562 5350200 55844 63317 56084 66393 66179 65123 68521 48415 58273 62070 TRUE FALSE 60119.45958 60172.76985 57953.81257 60968.47952 63580.47994 67601.3014 59524.11039 54743.00673 63341.48021 60044.66098 1.001245716 1.00213356 0.965178446 1.015385523 1.058886484 1.12585033 0.99133061 0.911704818 1.054906118 1 15.87374835 -1.548463514 22.07733442 1.012509394 0.001718328 0 0.054812491 0 0 0.013387981 0 0.028283717 1.548463514 -1.010791066 VFIDQNLS(ph)PGK ddPTM_A459_MK2206_30min_R1 1 VFIDQNLSPGK 11 0 F5H452;Q5JSB6;Q5JSB5;Q14186 F5H452 TFDP1 Transcription factor Dp-1 1 VFIDQNLS(1)PGK 115.24 0.0062346 24209000 3520.1 4110.1 4223.8 3536.5 2276.1 2603.8 3507.7 2806.7 4345.6 4214.7 TRUE FALSE 3220.69701 3842.531743 3937.100224 3808.881843 2185.438117 2751.224906 3273.707733 2782.161318 4797.340671 4736.848855 0.679923955 0.81119999 0.831164418 0.804096132 0.461369612 0.580813319 0.691115092 0.58734433 1.012770476 1 12.20971192 -8.271574676 24.66489769 1.00638534 0.684027971 0.581471392 0.110437577 514.4101714 1251833.553 0.113502428 0.030716035 5.35E-09 8.271574676 -0.322357369 VFIDQNLS(ph)PGK ddPTM_A459_MK2206_30min_R2 2 VFIDQNLSPGK 11 0 F5H452;Q5JSB6;Q5JSB5;Q14186 F5H452 TFDP1 Transcription factor Dp-1 1 VFIDQNLS(1)PGK;VFIDQNLS(1)PGK 124.47 0.0035638 35705000 108332 93446 97193 83279 78012 57679 100645 85083 60668 100147 TRUE FALSE 116625.9812 88805.60752 100433.3661 76474.8393 74948.8569 59874.01476 87430.1906 96203.64023 65944.79298 96879.21159 1.203828761 0.916663194 1.036686452 0.789383378 0.773631986 0.618027478 0.902465959 0.993026663 0.680690851 1 16.5638995 -4.206050073 0.873781365 0.822031098 1.868639788 0.419514118 0.128625161 5.441056324 1.597253044 0.045184515 6.930755131 6.22E-05 4.206050073 1.04660869 VFLQGPAPVGT(ph)PSFNR ddPTM_A459_MK2206_30min_R2 1 VFLQGPAPVGTPSFNR 16 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;H7C0V5 Q8IWZ3-6 ANKHD1;ANKHD1-EIF4EBP3 Ankyrin repeat and KH domain-containing protein 1 1 VFLQGPAPVGT(0.676)PS(0.324)FNR 137.17 0.00095407 3693500 16668 19407 18897 17684 20730 20446 20273 11850 13900 16980 TRUE FALSE 17944.1149 18443.2766 19527.01655 16239.16063 19916.03604 21224.08686 17611.13075 13398.83569 15108.99687 16425.94399 1.092425185 1.122813801 1.188791132 0.98862876 1.212474367 1.292107587 1.072153342 0.81571176 0.919825179 1 14.00368866 -7.593426702 5.759640463 0.903905423 1.148559257 0.605719352 0.08558422 0.135722719 8.083190858 0.042031775 0.02393273 2.55E-08 7.593426702 0.244653834 VFPLS(ph)PASNLR ddPTM_A459_MK2206_30min_R1 1 VFPLSPASNLR 11 0 A0A2R8YH03;Q5VWN6;J3KPH3 A0A2R8YH03 FAM208B Protein FAM208B 1 VFPLS(1)PASNLR 171.49 0.00030256 13962000 2012.8 2071.6 2163 2167 2450.4 2246.1 1929.8 2086 1924 1562.1 TRUE FALSE 1841.60079 1936.738463 2016.181586 2333.902715 2352.795379 2373.272241 1801.066563 2067.762322 2124.006685 1755.624741 1.048971769 1.103161979 1.148412607 1.329385865 1.340147085 1.35181066 1.025883562 1.177792881 1.209829547 1 10.77776879 -9.750643677 0.712674339 0.989373235 1.201041554 0.208480127 0.111894523 14.58346995 6.665910051 0.574626892 0.04458389 1.78E-10 9.750643677 0.211668319 VFPLS(ph)PASNLR ddPTM_A459_MK2206_30min_R2 4 VFPLSPASNLR 11 0 A0A2R8YH03;Q5VWN6;J3KPH3 A0A2R8YH03 FAM208B Protein FAM208B 1 VFPLS(0.999)PAS(0.001)NLR;VFPLS(1)PASNLR;VFPLS(0.615)PAS(0.385)NLR;VFPLS(0.978)PAS(0.022)NLR 179.67 5.21E-05 28953200 38141.5 51951.6 47520.5 48445.2 50551.4 48385.2 56190 39121.5 44316.1 49909.8 TRUE FALSE 41061.64257 49371.75909 49104.80975 44487.07219 48566.49804 50226.53269 48812.1855 44234.81437 48170.63427 48281.24731 0.850467725 1.022586653 1.017057605 0.921415139 1.005908106 1.040290703 1.010996779 0.916190381 0.997708985 1 15.55917533 -4.75345746 24.99885839 0.990885056 0.85046747 0.542303631 0.039110233 243.4581913 762434.916 0.010114959 0.108634119 1.76E-05 4.75345746 -0.140417587 VFS(ph)LSEADSHGGHWV ddPTM_A459_MK2206_30min_R1 2 VFSLSEADSHGGHWV 15 0 H7BXG1 H7BXG1 CLEC16A 1 VFS(0.999)LS(0.001)EADSHGGHWV;VFS(0.994)LS(0.006)EADSHGGHWV 170.42 3.48E-05 4687000 2860.5 2446.6 2463.4 1759.78 2969.5 3060.3 2898.6 2880 2176.5 1966.76 TRUE FALSE 2617.199454 2287.325895 2296.191271 1895.318561 2851.218527 3233.571541 2705.239683 2854.820464 2402.754964 2210.417077 1.184029693 1.034793804 1.038804529 0.857448388 1.289900696 1.462878465 1.223859384 1.291530224 1.087014296 1 11.1101029 -6.286002139 24.85908451 1.252190881 1.029916235 0.31616499 0.138796263 774.7224719 784066.2162 0.043034527 0.048818878 5.18E-07 6.286002139 -0.222274646 VFS(ph)QENVCDR ddPTM_A459_MK2206_30min_R2 1 VFSQENVCDR 10 0 Q6NV74;C9JFM2;C9JXD6;C9JK00 Q6NV74 KIAA1211L Uncharacterized protein KIAA1211-like 1 VFS(1)QENVCDR 89.44 0.030839 2158000 9505.8 14674 11592 13688 11360 8820.2 15382 8534.7 11137 11763 TRUE FALSE 10233.57136 13945.3105 11978.47149 12569.64661 10913.94932 9155.858892 13362.32492 9650.214594 12105.67613 11379.17427 0.8993246 1.225511638 1.052666143 1.104618517 0.959116106 0.804615403 1.174278959 0.848059302 1.063844866 1 13.47410825 -6.266108846 24.45785314 0.968834874 1.080324322 0.125027777 0.122086078 534.738228 2800859.203 0.035483162 0.041608135 5.42E-07 6.266108846 0.111489448 VFSGLVS(ph)TGLK ddPTM_A459_MK2206_30min_R1 3 VFSGLVSTGLK 11 0 P13639 P13639 EEF2 Elongation factor 2 1 VFSGLVS(0.629)T(0.371)GLK;VFSGLVS(0.63)T(0.37)GLK;VFSGLVS(0.5)T(0.5)GLK 180.24 4.89E-05 21822200 12850.8 13904.7 13385.2 11677.1 12178.7 10457.4 11808.1 11709.4 12117.2 10586.6 TRUE FALSE 11757.77198 12999.5015 12476.64992 12576.47227 11693.59659 11049.48895 11020.40319 11607.02595 13376.8263 11898.14793 0.988201865 1.092565127 1.048621179 1.057010918 0.982808136 0.928673018 0.926228456 0.97553216 1.124278029 1 13.5384494 -6.265647664 23.33581444 0.982149644 1.050027402 0.18717203 0.056773998 216.6987508 1201638.659 0.017996176 0.021195838 5.42E-07 6.265647664 0.067877757 VFSGLVS(ph)TGLK ddPTM_A459_MK2206_30min_R2 1 VFSGLVSTGLK 11 0 P13639 P13639 EEF2 Elongation factor 2 1 VFSGLVS(0.953)T(0.047)GLK 150.51 0.00061227 7594200 30128 29014 26969 34191 33695 23318 37931 23261 25796 37279 TRUE FALSE 32434.62284 27573.20695 27868.133 31397.48593 32371.965 24205.38283 32950.61414 26301.29257 28039.68945 36062.58928 0.89939806 0.7645931 0.772771272 0.870638702 0.897660585 0.671204795 0.913706275 0.729323465 0.777528458 1 15.13821537 -10.58538679 4.680342275 1.000007077 0.809128598 0.34777538 0.077718815 105587192.2 5.91334E+11 9975198.843 0.018575315 2.60E-11 10.58538679 -0.190878478 VFSGLVST(ph)GLK ddPTM_A459_MK2206_30min_R1 1 VFSGLVSTGLK 11 0 P13639 P13639 EEF2 Elongation factor 2 1 VFSGLVS(0.286)T(0.714)GLK 156.36 0.0012775 13116000 3558 3686.5 3649.6 2764.9 3161.2 3442.3 3314.8 2756.5 3466.5 2456.1 TRUE FALSE 3255.373416 3446.50818 3401.87532 2977.853077 3035.28271 3637.200051 3093.67574 2732.400211 3826.85508 2760.380211 1.179320662 1.248562849 1.23239375 1.078783664 1.099588636 1.31764459 1.120742617 0.989863715 1.386350715 1 11.43065128 -11.00473458 3.165947433 0.995931518 1.177862747 0.193216473 0.112040307 40372023.1 52749158.1 1451940.024 0.027333236 9.89E-12 11.00473458 0.181931229 VFSGLVST(ph)GLK ddPTM_A459_MK2206_30min_R2 1 VFSGLVSTGLK 11 0 P13639 P13639 EEF2 Elongation factor 2 1 VFSGLVS(0.284)T(0.716)GLK 147.33 0.0015633 6433700 24388 26887 22713 27148 24906 24300 27490 25170 17115 27345 TRUE FALSE 26255.16403 25551.83068 23470.24008 24929.92156 23928.0653 25224.75353 23880.52998 28459.80542 18603.63176 26452.73489 0.992531175 0.965942871 0.88725193 0.94243267 0.904559222 0.953578283 0.902762232 1.075873838 0.703278199 1 14.69112927 -5.044189725 6.354932493 0.924563013 0.98662384 0.064758613 0.090011837 0.513973035 56.15656784 0.021052756 0.060409792 9.03E-06 5.044189725 0.062060827 VFTTQELVQAFTHAPATLEADR ddPTM_A459_MK2206_30min_R1 1 VFTTQELVQAFTHAPATLEADR 22 0 O95433-2;O95433;H0YJ63;G3V438;H0YJG7 O95433-2 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 0 206.85 3.78E-23 1844100 769.52 956.24 711.77 866.43 690.55 673.41 796.06 772.72 700.88 863.61 FALSE TRUE 704.0682831 893.9886022 663.4570355 933.1625887 663.0439312 711.5378923 742.9562899 765.9641905 773.7389841 970.6005267 0.725394499 0.921067502 0.683553138 0.961428068 0.683127521 0.733090363 0.765460423 0.789165233 0.797175525 1 9.922733833 -9.071838837 2.124396039 0.999998232 0.784602252 0.353118733 0.087716612 8.489958743 31.53672759 0.079636563 0.021808404 8.48E-10 9.071838837 -0.215395979 VFVGGLS(ph)PDTSEEQIK ddPTM_A459_MK2206_30min_R1 1 VFVGGLSPDTSEEQIK 16 0 O14979-3;O14979-2;A0A087WUK2;O14979 O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like 1 VFVGGLS(1)PDTSEEQIK 251.05 1.81E-29 3183400 1317.6 1080.2 1056.3 932.8 994.69 889.17 1211.2 830.61 1255.6 1353.7 TRUE FALSE 1205.531201 1009.878784 984.601299 1004.644418 955.069391 939.514037 1130.403058 823.3480643 1386.124113 1521.406576 0.792379381 0.663779689 0.64716514 0.660339211 0.627754215 0.617529891 0.742998667 0.541175566 0.911080664 1 10.57119003 -8.42119835 4.930376675 0.997049551 0.662057753 0.769968197 0.065003565 0.087994209 3.088994489 0.059527186 0.015509278 3.79E-09 8.42119835 -0.334991798 VFVGGLS(ph)PDTSEEQIK ddPTM_A459_MK2206_30min_R2 1 VFVGGLSPDTSEEQIK 16 0 O14979-3;O14979-2;A0A087WUK2;O14979 O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like 1 VFVGGLS(0.991)PDT(0.003)S(0.006)EEQIK 151.8 0.00019053 2817000 37358 29571 27948 27166 22051 21478 29308 27185 18526 34734 TRUE FALSE 40218.1572 28102.54714 28879.77237 24946.4509 21185.16694 22295.36034 25459.82439 30738.17284 20137.35799 33600.63242 1.196946435 0.836369589 0.859500857 0.742439922 0.630499054 0.663539902 0.757718607 0.914809354 0.59931485 1 15.03620077 -3.61169501 1.126322375 0.751127343 5.943018293 0.52944723 0.119660203 14.4313594 1.886873207 0.035249301 160.0790231 0.000244515 3.61169501 5.19189095 VGAEDADGIDMAYR ddPTM_A459_MK2206_30min_R2 2 VGAEDADGIDMAYR 14 0 P49588;P49588-2 P49588 AARS "Alanine--tRNA ligase, cytoplasmic" 0 ; 215.04 9.86E-06 6922400 30378 35643 31174 39566 36600 33626 33213 31318 30364 31801 FALSE TRUE 32703.76304 33873.02045 32213.3256 36333.33123 35162.9001 34905.66099 28852.0932 35411.37013 33005.00583 30763.33597 1.063075964 1.101084111 1.047133693 1.181059533 1.143013233 1.13465136 0.937872708 1.151090056 1.072868231 1 14.90892434 VGALDVPASQFLGSAT(ph)SPGPR ddPTM_A459_MK2206_30min_R2 1 VGALDVPASQFLGSATSPGPR 21 0 P49815;X5D2U8;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8YGU4;A0A2R8Y5F1;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4 P49815 TSC2 Tuberin 1 VGALDVPASQFLGSAT(0.975)S(0.025)PGPR 140.96 4.13E-05 3036600 30217 39749 31192 32175 40957 47146 40161 29081 44940 45888 TRUE FALSE 32530.43675 37775.12246 32231.92571 29546.19958 39348.82239 48940.17407 34887.81246 32881.98655 48848.79997 44390.67832 0.732821349 0.850969706 0.726096715 0.665594686 0.886420841 1.102487638 0.785926545 0.7407408 1.10042923 1 15.43796913 -6.427047348 6.487117463 0.927533194 0.751524628 0.391558052 0.11793284 0.298755852 17.05722511 0.037815916 0.042787864 3.74E-07 6.427047348 -0.176008566 VGASTES(ph)GR ddPTM_A459_MK2206_30min_R2 1 VGASTESGR 9 0 U3KQ81 U3KQ81 PITX2 1 VGAS(0.014)T(0.048)ES(0.938)GR 94.409 0.023293 21362000 81831 87935 75767 87985 84102 86203 100740 87630 110700 98613 TRUE FALSE 88096.04428 83568.27577 78293.03396 80796.34405 80799.7329 89483.51557 87512.71699 99083.54188 120328.4859 95395.26589 0.923484446 0.876021205 0.820722425 0.846963875 0.846999399 0.938028892 0.917369601 1.038663093 1.261367478 1 16.54163005 -7.819037666 2.517052296 1.136288652 0.873595158 0.69323054 0.068406769 0.148417912 1.860579645 0.044593331 0.018574383 1.52E-08 7.819037666 -0.262693494 VGDDVEFEVSSDRR ddPTM_A459_MK2206_30min_R1 2 VGDDVEFEVSSDRR 14 1 O75534;O75534-4;O75534-2;O75534-3;E9PLD4 O75534 CSDE1 Cold shock domain-containing protein E1 0 ; 184.34 0.0001046 17831000 5449.5 5020.5 4655.2 3906.9 5142.7 4519.6 4322.8 4729.3 3934.1 3351.3 FALSE TRUE 4985.991409 4693.664537 4339.217994 4207.810115 4937.855369 4775.495846 4034.433899 4687.952229 4343.063773 3766.484345 1.323778609 1.246165949 1.152060542 1.117171805 1.310998511 1.267892127 1.071140493 1.244649333 1.153081594 1 11.87900282 -14.52287873 0.154936011 0.233241213 1.268484829 0.450311895 0.075267692 135.7945737 1.22524654 31.90921236 0.363939556 3.00E-15 14.52287873 1.035243615 VGDDVEFEVSSDRR ddPTM_A459_MK2206_30min_R2 2 VGDDVEFEVSSDRR 14 1 O75534;O75534-4;O75534-2;O75534-3;E9PLD4 O75534 CSDE1 Cold shock domain-containing protein E1 0 ; 180.61 2.33E-10 5813100 46445 52558 54038 59460 60783 51339 53863 44693 51516 50796 FALSE TRUE 50000.86491 49948.04615 55839.59995 54601.9278 58396.35401 53292.74162 46790.7234 50534.52855 55996.76856 49138.53068 1.017549044 1.016474149 1.136370974 1.111183567 1.188402527 1.084540805 0.952220645 1.028409435 1.139569454 1 15.5845671 -7.025332827 24.71270101 1.030412098 1.097345642 0.182603919 0.06470831 1195.055633 1165798.206 0.026294212 0.020457578 9.43E-08 7.025332827 0.066933544 VGDGDLS(ph)AEEIPENEVSLR ddPTM_A459_MK2206_30min_R1 4 VGDGDLSAEEIPENEVSLR 19 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VGDGDLS(1)AEEIPENEVSLR;VGDGDLS(1)AEEIPENEVSLR;VGDGDLS(1)AEEIPENEVSLR;VGDGDLS(1)AEEIPENEVSLR 159.4 2.13E-06 164212500 2868.44 3010.51 3249.18 2356.73 3028.18 3016.67 3196.39 3044.91 2928.33 3262.15 TRUE FALSE 2624.464115 2814.525252 3028.634714 2538.245753 2907.561178 3187.471248 2983.164655 3018.288673 3232.740383 3666.28977 0.715836521 0.767676705 0.826076198 0.692320005 0.793052748 0.869399706 0.813673998 0.82325426 0.881747103 1 11.8401051 -14.52287872 0.083816689 1.714965536 0.59916995 0.762065381 0.040614657 117.5183019 0.690014402 15.04301232 1.251041148 3.00E-15 14.52287872 -1.115795586 VGDGDLS(ph)AEEIPENEVSLR ddPTM_A459_MK2206_30min_R2 2 VGDGDLSAEEIPENEVSLR 19 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VGDGDLS(1)AEEIPENEVSLR;VGDGDLS(1)AEEIPENEVSLR 180.04 5.23E-13 28595000 101921 96526 104165 107623 97498 92569 117838 83495 83296 117912 TRUE FALSE 109724.1501 91732.6592 107637.8091 98829.85663 93669.73863 96091.77816 102365.7291 94408.08318 90540.93552 114064.5411 0.961947938 0.804217142 0.943657057 0.866438033 0.821199452 0.842433391 0.897436908 0.827672494 0.79376934 1 16.79949085 -4.7378502 24.43492749 0.862165905 0.961948502 0.17454551 0.061802032 2585.577974 2678094.879 0.014497474 0.822040328 1.83E-05 4.7378502 0.099782596 VGDGDLS(ph)AEEIPENEVSLRR ddPTM_A459_MK2206_30min_R1 4 VGDGDLSAEEIPENEVSLRR 20 1 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VGDGDLS(0.971)AEEIPENEVS(0.029)LRR;VGDGDLS(0.999)AEEIPENEVS(0.001)LRR;VGDGDLS(1)AEEIPENEVSLRR;VGDGDLS(0.979)AEEIPENEVS(0.021)LRR 92.39 0.00072206 174264000 4569.32 4844.58 4684.72 4481.42 4996.89 4118.99 4776.17 4179.13 3957.69 3306.96 TRUE FALSE 4180.67534 4529.196961 4366.734259 4826.579745 4797.85329 4352.203654 4457.560414 4142.592307 4369.106038 3716.651171 1.124850073 1.218623097 1.174910977 1.298636736 1.290907613 1.171001381 1.199348609 1.114603474 1.175549127 1 11.85978757 -8.780246861 0.665565908 1.000062759 1.21873738 0.562238598 0.054554449 0.846464216 0.767538147 0.06034836 0.022653707 1.66E-09 8.780246861 0.218674621 VGDGDLS(ph)AEEIPENEVSLRR ddPTM_A459_MK2206_30min_R2 4 VGDGDLSAEEIPENEVSLRR 20 1 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VGDGDLS(0.995)AEEIPENEVS(0.005)LRR;VGDGDLS(0.998)AEEIPENEVS(0.002)LRR;VGDGDLS(0.934)AEEIPENEVS(0.066)LRR;VGDGDLS(1)AEEIPENEVSLRR 85.884 0.0012071 70510200 30937.8 43680.2 40988.8 40201.5 44727.6 45197.2 42183.3 28700.8 47489.4 33128.2 TRUE FALSE 33306.42176 41511.10478 42355.34613 36916.90885 42971.36969 46917.21112 36644.58204 32452.0931 51619.94217 32047.22955 1.039291765 1.295310246 1.321653907 1.151953207 1.340876272 1.464002093 1.143455536 1.01263334 1.610745855 1 14.96791202 -10.75559956 3.683743626 0.999616599 1.260872096 0.167901481 0.176443992 122981479.7 209330904 549122.9638 0.042595654 1.76E-11 10.75559956 0.261255497 VGDPPQPLPEEPMEVQGAERAS(ph)PEPQR ddPTM_A459_MK2206_30min_R1 1 VGDPPQPLPEEPMEVQGAERASPEPQR 27 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 VGDPPQPLPEEPMEVQGAERAS(1)PEPQR 94.016 2.93E-06 29755000 954.08 967.04 866.38 931.11 968.35 1000.6 1193.5 828.32 1036.7 711.6 TRUE FALSE 872.9304859 904.0855202 807.5725395 1002.824254 929.778569 1057.253107 1113.883793 821.0780856 1144.468675 799.7583803 1.091492765 1.130448324 1.00977065 1.253909028 1.162574337 1.32196565 1.392775393 1.026657683 1.431018046 1 9.643420395 -5.774552458 24.87402073 1.236278086 1.082558352 0.202327704 0.135255279 309.0406309 586214.4791 0.035988152 0.053750168 1.68E-06 5.774552458 -0.153719734 VGDPPQPLPEEPMEVQGAERAS(ph)PEPQR ddPTM_A459_MK2206_30min_R2 2 VGDPPQPLPEEPMEVQGAERASPEPQR 27 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 VGDPPQPLPEEPMEVQGAERAS(1)PEPQR;VGDPPQPLPEEPMEVQGAERAS(1)PEPQR 83.115 4.35E-05 68076000 54196 58460 61579 60114 68447 68676 58951 58019 52132 65452 TRUE FALSE 58345.28743 55556.96141 63632.01313 55202.4939 65759.42686 71289.5133 51210.66289 65602.28251 56666.34713 63316.3066 0.921489117 0.877451077 1.00498618 0.871852716 1.038585957 1.125926592 0.808806856 1.036104063 0.894972404 1 15.95028948 -5.394373339 1.363391955 0.976341332 0.897452337 0.074954808 0.089316826 1.547141638 4.887184107 0.027895537 0.123073305 4.03E-06 5.394373339 -0.078888995 VGDS(ph)TPVSEKPVSAAVDANASESP ddPTM_A459_MK2206_30min_R2 1 VGDSTPVSEKPVSAAVDANASESP 24 1 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 VGDS(0.429)T(0.429)PVS(0.141)EKPVSAAVDANASESP 53.475 0.010936 14467000 43891 39363 46215 42242 51563 38186 44151 26614 33644 38444 TRUE FALSE 47251.32871 37408.29066 47755.78503 38790.69347 49538.37754 39639.19499 38353.92067 30092.54118 36570.29431 37189.57543 1.270553056 1.00588109 1.284117511 1.043052872 1.332050096 1.065868447 1.031308377 0.809166032 0.983347992 1 15.18261066 -7.267583778 2.432296481 0.926030845 1.173792789 0.484931997 0.111173927 0.238350629 2.775192744 0.049046834 0.03229137 5.40E-08 7.267583778 0.247761943 VGDSTPVS(ph)EKPVSAAVDANASESP ddPTM_A459_MK2206_30min_R1 1 VGDSTPVSEKPVSAAVDANASESP 24 1 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 VGDS(0.331)T(0.15)PVS(0.51)EKPVS(0.008)AAVDANASESP 47.485 0.031579 11788000 3779.7 3274.1 3579.8 2875.8 3296 3151.8 3203.1 2912.9 2948.8 3012.8 TRUE FALSE 3458.216667 3060.955495 3336.81315 3097.294614 3164.713341 3330.252192 2989.427043 2887.432822 3255.338312 3386.048409 1.021313416 0.903990471 0.985459375 0.914722485 0.934633224 0.983521731 0.882866008 0.852744106 0.961397452 1 11.72538688 -7.262483737 24.99988776 0.911980568 0.953169438 0.070076517 0.050392361 199.3766296 4772627.375 0.019322314 0.013896232 5.46E-08 7.262483737 0.041188871 VGDSTPVSEKPVSAAVDANASES(ph)P ddPTM_A459_MK2206_30min_R1 2 VGDSTPVSEKPVSAAVDANASESP 24 1 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 VGDSTPVSEKPVSAAVDANAS(0.001)ES(0.999)P;VGDSTPVSEKPVSAAVDANAS(0.001)ES(0.999)P 111.55 1.71E-07 62867000 8021.9 7953.6 8645.4 7199 8215.1 7391.4 8332.6 7735.7 6821.2 6127.1 TRUE FALSE 7339.59528 7435.819194 8058.574335 7753.468227 7887.875171 7809.89468 7776.747458 7668.06759 7530.28815 6886.171405 1.065845569 1.079819069 1.170254683 1.125947609 1.145465994 1.134141778 1.129328185 1.11354585 1.093537716 1 12.74948638 -8.818702142 1.529481678 1.000080251 1.123226003 0.61796837 0.028435983 0.767299487 2.899742635 0.029021951 0.008392179 1.52E-09 8.818702142 0.123145752 VGDSTPVSEKPVSAAVDANASES(ph)P ddPTM_A459_MK2206_30min_R2 3 VGDSTPVSEKPVSAAVDANASESP 24 1 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 VGDSTPVSEKPVSAAVDANAS(0.104)ES(0.896)P;VGDSTPVSEKPVSAAVDANASES(1)P;VGDSTPVSEKPVSAAVDANASES(1)P 132.39 5.80E-08 30614100 205735 254239 231436 280019 257111 265049 283190 226057 223231 254537 TRUE FALSE 221486.2298 241613.861 239151.9607 257140.552 247015.5303 275135.6254 246006.8128 255603.4261 242647.2289 246231.4785 0.899504121 0.981246843 0.971248527 1.044304138 1.003184206 1.117386075 0.999087583 1.038061533 0.985443577 1 17.90965568 -4.57966694 0.945420606 1.029603822 0.795292811 0.500317971 0.037760912 2.291056661 1.259650786 0.012445589 0.602601492 2.63E-05 4.57966694 -0.234311011 VGDTEKPEPERS(ph)PPNR ddPTM_A459_MK2206_30min_R1 1 VGDTEKPEPERSPPNR 16 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 VGDT(0.005)EKPEPERS(0.995)PPNR 131.18 0.02365 9164900 1484.2 1616.8 1751.1 1230.5 1457.6 1007.2 1304.1 1402 1386.3 1186.4 TRUE FALSE 1357.960996 1511.546026 1632.240211 1325.273323 1399.540705 1064.226794 1217.105868 1389.742462 1530.410846 1333.380189 1.018434958 1.133619682 1.22413714 0.993920064 1.049618644 0.798142047 0.912797324 1.042270219 1.1477678 1 10.38087248 -5.865829319 8.845479339 0.984108444 1.12592564 0.278635109 0.097809048 0.348798788 26.77944132 0.02962576 0.044054022 1.36E-06 5.865829319 0.141817196 VGDVT(ph)PQVK ddPTM_A459_MK2206_30min_R1 2 VGDVTPQVK 9 0 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 VGDVT(1)PQVK;VGDVT(1)PQVK 119.39 0.016168 56584000 10993.4 10378.7 8822.9 8055.1 8329.8 7809.6 8200.5 7501.8 7092.1 6534.7 TRUE FALSE 10058.3536 9703.044744 8224.02613 8675.505198 7998.006427 8251.772803 7653.459608 7436.212554 7829.349174 7344.26797 1.369551553 1.321172482 1.119788407 1.181262072 1.089013426 1.123566411 1.042099722 1.01251923 1.066048952 1 12.84240298 -1.522878747 0.320623301 1.012647372 4.756794639 0.899460937 0.037629744 15.585955 0.222419552 0.03447149 34.24052719 0.03 1.522878747 3.744147267 VGDVT(ph)PQVK ddPTM_A459_MK2206_30min_R2 3 VGDVTPQVK 9 0 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 VGDVT(1)PQVK;VGDVT(1)PQVK;VGDVT(1)PQVK 102.05 0.03854 89258000 783990 751980 702720 710950 718090 551730 725010 530610 537100 706780 TRUE FALSE 844012.8772 714637.7667 726148.3341 652863.1108 689894.1785 572726.4718 629815.3161 599962.5489 583815.9871 683717.8265 1.234446206 1.045223247 1.062058507 0.95487215 1.009033481 0.837664969 0.921162637 0.877500228 0.853884402 1 19.38304152 -3.461015978 0.480257928 0.892635401 2.243817575 0.751142446 0.056380823 7.058525975 0.46693434 0.032457746 7.098065676 0.000345927 3.461015978 1.351182175 VGEDEDGS(ph)DEEVVHNEDIHFEPIVSLPEVEVK ddPTM_A459_MK2206_30min_R1 5 VGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVK 32 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 VGEDEDGS(1)DEEVVHNEDIHFEPIVSLPEVEVK;VGEDEDGS(0.999)DEEVVHNEDIHFEPIVS(0.001)LPEVEVK;VGEDEDGS(1)DEEVVHNEDIHFEPIVSLPEVEVK;VGEDEDGS(1)DEEVVHNEDIHFEPIVSLPEVEVK;VGEDEDGS(0.999)DEEVVHNEDIHFEPIVS(0.001)LPEVEVK 71.682 4.54E-05 134430500 22688.43 26853.21 27395.02 24203.6 18453.66 15901.33 19612.63 22409.47 22993.97 21874.67 TRUE FALSE 20758.65989 25105.06115 25535.52237 26067.76547 17718.61165 16801.64956 18304.30724 22213.54637 25384.27547 24584.66926 0.844374177 1.021167333 1.038676669 1.060326059 0.720717918 0.683419792 0.744541529 0.903552784 1.032524586 1 14.58547133 -6.251827888 24.86123084 0.829289195 0.99667691 0.245468965 0.120756272 863.7858727 2234280.2 0.038254449 0.048744076 5.60E-07 6.251827888 0.167387714 VGEDEDGS(ph)DEEVVHNEDIHFEPIVSLPEVEVK ddPTM_A459_MK2206_30min_R2 3 VGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVK 32 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 VGEDEDGS(0.999)DEEVVHNEDIHFEPIVS(0.001)LPEVEVK;VGEDEDGS(0.999)DEEVVHNEDIHFEPIVS(0.001)LPEVEVK;VGEDEDGS(0.97)DEEVVHNEDIHFEPIVS(0.03)LPEVEVK 58.277 0.00069574 34920400 124013 119723 134551 103465 135407 81618 139599 103613 99223 146666 TRUE FALSE 133507.5306 113777.7299 139036.8632 95011.57853 130090.2408 84724.03018 121269.4836 117155.5749 107853.2372 141880.3004 0.940987087 0.801927608 0.9799589 0.669660117 0.916901363 0.597151472 0.854730947 0.825735317 0.760170629 1 17.11431476 -5.746360859 24.99960702 0.794482 0.897054792 0.139108428 0.116353057 461.7628525 765578.8018 0.029349615 0.050584579 1.79E-06 5.746360859 0.102572792 VGEEEHVY(ph)SFPNK ddPTM_A459_MK2206_30min_R1 1 VGEEEHVYSFPNK 13 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 VGEEEHVY(0.992)S(0.008)FPNK 169.09 0.0017165 18167000 7070.8 7014.1 6676.1 6020.8 5516.2 4892.7 5143.9 5737.2 4981.5 4752.3 TRUE FALSE 6469.39133 6557.480815 6222.944933 6484.523059 5296.478073 5169.720446 4800.759817 5687.040265 5499.344751 5341.050802 1.211258153 1.227751066 1.165116222 1.214091253 0.991654689 0.967921976 0.898841819 1.064779287 1.02963723 1 12.38290789 -6.263596246 24.22080648 0.989502392 1.203394108 0.85530176 0.042792562 46.77609923 525278.4383 0.013941026 0.016609134 5.45E-07 6.263596246 0.213891716 VGEEEHVY(ph)SFPNK ddPTM_A459_MK2206_30min_R2 1 VGEEEHVYSFPNK 13 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 VGEEEHVY(0.999)S(0.001)FPNK 205.02 0.00017929 62173000 202850 172930 170160 151610 193050 123910 196220 119520 122320 144960 TRUE FALSE 218380.352 164342.5477 175833.0495 139222.978 185469.887 128625.4819 170456.0783 135141.6744 132959.1725 140229.9671 1.557301599 1.171950269 1.253890685 0.992819017 1.322612355 0.917246752 1.215546733 0.963714655 0.948150921 1 17.09743516 -1.522878745 0.500521924 1.031836087 16.0277522 0.573060954 0.128312101 78.81870514 0.83633363 0.066939922 1243.089989 0.03 1.522878745 14.99591612 VGEEEHVYS(ph)FPNK ddPTM_A459_MK2206_30min_R1 3 VGEEEHVYSFPNK 13 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 VGEEEHVY(0.235)S(0.765)FPNK;VGEEEHVYS(1)FPNK;VGEEEHVY(0.275)S(0.725)FPNK 234.85 9.64E-14 123879000 14057.2 13029.2 12875 11084.4 10866.3 9905.8 9476.7 11168 8867.3 9260.5 TRUE FALSE 12861.56132 12180.99671 12001.08087 11938.12241 10433.47226 10466.65784 8844.526634 11070.35935 9789.087567 10407.76065 1.235766439 1.17037633 1.153089629 1.147040445 1.002470427 1.005658968 0.849801118 1.063663906 0.940556561 1 13.34537207 -6.227156868 1.661797067 0.966259413 1.191132788 0.766707024 0.054548492 0.174558183 0.954954594 0.019051465 0.026305389 5.93E-07 6.227156868 0.224873375 VGEEEHVYS(ph)FPNK ddPTM_A459_MK2206_30min_R2 1 VGEEEHVYSFPNK 13 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-3;A0A1B0GU60;F5H836 A0A1B0GTU4 PXN Paxillin 1 VGEEEHVY(0.119)S(0.881)FPNK 183.28 1.23E-14 0 17684 20075 18008 16980 19616 14924 21505 15547 12226 16108 TRUE FALSE 19037.90064 19078.10469 18608.37773 15592.67968 18845.77728 15491.94328 18681.36767 17579.04628 13289.39538 15582.39728 1.221756851 1.224336946 1.194192228 1.000659873 1.209427339 0.994195116 1.198876356 1.128134905 0.852846654 1 13.92762958 -1.522878745 0.151333229 0.947325033 2.04059452 0.376914673 0.097889017 75.9988524 0.755081533 0.335935179 18.26936978 0.03 1.522878745 1.093269487 VGEFCHNR ddPTM_A459_MK2206_30min_R1 4 VGEFCHNR 8 0 P22314;Q5JRR9;P22314-2;Q5JRS2;Q5JRS0 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 0 ;;; 141.52 0.00038547 18184500 22746.6 22812.6 24677.1 20951 24063 20378 25332 23542 13497.6 20424.6 FALSE TRUE 20811.88222 21327.49559 23002.08721 22564.64965 23104.51976 21531.78475 23642.1485 23336.17478 14900.72382 22954.95365 0.906640133 0.929102098 1.002053307 0.98299696 1.006515635 0.938001665 1.029936669 1.016607358 0.649128901 1 14.4865179 -8.211814919 24.99999619 0.824562752 0.977472285 0.326275116 0.087311199 338.4175401 170489.6407 0.054320173 0.020531029 6.14E-09 8.211814919 0.152909533 VGEFCHNR ddPTM_A459_MK2206_30min_R2 4 VGEFCHNR 8 0 P22314;Q5JRR9;P22314-2;Q5JRS2;Q5JRS0 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 0 ;;; 153.04 0.0012876 33489300 134382 172448 148831 164443 154489 146575 161358 123730 138038 141954 FALSE TRUE 144670.3892 163884.4831 153792.9513 151007.4809 148422.9856 152153.0143 140171.5008 139901.9358 150044.2957 137322.0526 1.053511701 1.193431645 1.11994358 1.099659363 1.080838677 1.108001311 1.020750113 1.018787101 1.092645303 1 17.0672038 -6.849608934 0.92354108 1.031862592 1.126405924 0.424554279 0.041644075 0.530010234 0.96580722 0.025830671 0.021757028 1.41E-07 6.849608934 0.094543332 VGEFS(ph)GANK ddPTM_A459_MK2206_30min_R1 1 VGEFSGANK 9 0 P10599;P10599-2 P10599 TXN Thioredoxin 1 VGEFS(1)GANK 84.507 0.036404 9135000 2016.4 2212.4 2216.3 1810.5 1893.9 1821.5 3031 2049.5 2098.5 2335 TRUE FALSE 1844.894591 2068.372358 2065.863731 1949.945024 1818.461953 1924.631756 2828.80752 2031.581438 2316.646585 2624.277428 0.703010502 0.78816833 0.787212399 0.743040733 0.692938152 0.733394928 1.077937679 0.774148882 0.88277503 1 11.35770453 -7.211636004 24.99984827 0.914894613 0.743393327 0.581678052 0.079289669 288.2499588 144693.2007 0.029773346 0.023062298 6.14E-08 7.211636004 -0.171501286 VGGS(ph)DEEASGIPSR ddPTM_A459_MK2206_30min_R1 7 VGGSDEEASGIPSR 14 0 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55-2;Q9NQ55;Q9NQ55-3 H7C446 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog 1 VGGS(0.997)DEEAS(0.003)GIPSR;VGGS(1)DEEASGIPSR;VGGS(0.992)DEEAS(0.008)GIPSR;VGGS(0.999)DEEAS(0.001)GIPSR;VGGS(0.999)DEEAS(0.001)GIPSR;VGGS(1)DEEASGIPSR;VGGS(0.997)DEEAS(0.003)GIPSR 155.09 0.00033161 388740500 8172.09 7997.11 8022.33 7198.9 9003.8 8427.83 8708.9 8234.8 6995.44 5699.88 TRUE FALSE 7477.010832 7476.496685 7477.796591 7753.360525 8645.15958 8905.006451 8127.945171 8162.804012 7722.641021 6406.024166 1.1671843 1.16710404 1.167306959 1.210323334 1.349535899 1.390098791 1.268797145 1.274238717 1.205527925 1 12.64521353 -6.020220842 8.024490115 1.270865419 1.170539153 0.092583946 0.099042736 0.351455137 116.1350885 0.028061382 0.037904451 9.55E-07 6.020220842 -0.100326266 VGGS(ph)DEEASGIPSR ddPTM_A459_MK2206_30min_R2 6 VGGSDEEASGIPSR 14 0 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55-2;Q9NQ55;Q9NQ55-3 H7C446 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog 1 VGGS(0.999)DEEAS(0.001)GIPSR;VGGS(1)DEEASGIPSR;VGGS(1)DEEASGIPSR;VGGS(1)DEEASGIPSR;VGGS(1)DEEASGIPSR;VGGS(1)DEEASGIPSR 225.29 1.04E-09 1183724100 338224 419163 308974 365991 391439 307271 418447 316618 320684 376517 TRUE FALSE 364118.6895 398347.9749 319275.0389 336088.3646 376069.138 318964.4132 363504.4063 358001.0597 348576.5147 364231.2811 0.999690879 1.093667666 0.876572265 0.922733389 1.032500934 0.875719439 0.998004359 0.982894875 0.957019709 1 18.4744953 -5.248813395 24.92262069 0.955292423 1.046679268 0.316924435 0.053435709 852.9864519 1683715.592 0.013194099 0.034412519 5.64E-06 5.248813395 0.091386844 VGGS(ph)SVDLHR ddPTM_A459_MK2206_30min_R1 4 VGGSSVDLHR 10 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 VGGS(0.784)S(0.216)VDLHR;VGGS(0.995)S(0.005)VDLHR;VGGS(0.848)S(0.152)VDLHR;VGGS(0.707)S(0.293)VDLHR 150.09 0.00072324 169878000 21279.6 17527.7 12153.5 11048.9 16474.5 17178 14053.7 11783.4 10109.9 8695.7 TRUE FALSE 19469.65828 16386.64354 11328.55428 11899.88819 15818.28578 18150.60352 13116.20332 11680.37898 11160.86028 9772.988965 1.992190756 1.676727929 1.159169863 1.217630372 1.618571947 1.857221325 1.342087192 1.195169566 1.142010937 1 13.25458415 -1.522878755 0.077809405 0.561468766 3.637480765 0.421524172 0.245653988 249.7292822 1.426220214 8.791509696 82.86554458 0.029999999 1.522878755 3.076011999 VGGS(ph)SVDLHR ddPTM_A459_MK2206_30min_R2 4 VGGSSVDLHR 10 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 VGGS(0.638)S(0.362)VDLHR;VGGS(0.5)S(0.5)VDLHR;VGGS(0.921)S(0.079)VDLHR;VGGS(0.741)S(0.259)VDLHR 144.17 0.0010097 124513000 344998 467827 332798 416450 329787 406001 358746 297793 343767 296079 TRUE FALSE 371411.3121 444595.3915 343893.3192 382424.7028 316837.9053 421451.6526 311642.2193 336715.5676 373667.2323 286417.9665 1.29674586 1.552260834 1.200669509 1.335198024 1.106208208 1.471456759 1.088067984 1.175609099 1.304622182 1 18.12776247 -4.591512116 0.032940415 6.60E-07 2.757273685 0.343610003 0.133151291 644.0818113 3.143264537 101.2513974 167.9798245 2.56E-05 4.591512116 2.757273025 VGGSS(ph)VDLHR ddPTM_A459_MK2206_30min_R1 1 VGGSSVDLHR 10 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 1 VGGS(0.224)S(0.776)VDLHR 155.47 0.00034716 15179000 4036.6 4168.5 4467.5 3423.5 4208.7 3739.5 4946.2 4192.7 4654.8 4092.1 TRUE FALSE 3693.265973 3897.129892 4164.258547 3687.178563 4041.058567 3951.227258 4616.248023 4156.043666 5138.683117 4599.060242 0.803047966 0.847375265 0.905458578 0.801724346 0.878670501 0.859137965 1.003737238 0.903672369 1.117333291 1 12.16712338 -7.473607872 1.050806083 1.035878881 0.842823378 0.661094257 0.055395601 0.319063573 0.657449204 0.041088809 0.019771385 3.36E-08 7.473607872 -0.193055503 VGGSSVDLHR ddPTM_A459_MK2206_30min_R2 1 VGGSSVDLHR 10 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6;O60716-19;O60716-11;O60716-13;O60716-21;O60716-24;O60716-9;O60716-17;O60716-16;O60716-10;O60716-23;O60716-15;O60716-18;O60716-12;O60716-22;O60716-20;O60716-14 O60716-5 CTNND1 Catenin delta-1 0 102.53 0.021342 2014800 14760 20277 16874 26633 25461 28722 27583 18608 29948 18701 FALSE TRUE 15890.03695 19270.07367 17436.57074 24456.99871 24461.27321 29815.03584 23961.31897 21040.12949 32552.82291 18090.7879 0.878349635 1.065187087 0.963837 1.351903457 1.352139738 1.648078348 1.324503891 1.163030024 1.799414325 1 14.14296762 -5.791512277 5.000195885 1.395199279 0.975925408 0.429219717 0.215112932 0.167834889 10.35096748 0.058123007 0.091864483 1.62E-06 5.791512277 -0.419273872 VGGTSDVEVNEK ddPTM_A459_MK2206_30min_R1 1 VGGTSDVEVNEK 12 0 P10809 P10809 HSPD1 "60 kDa heat shock protein, mitochondrial" 0 124.12 0.04334 6422400 3183.8 2290.9 2394.6 2471.5 4098 4292.6 4088 3389.8 1820.1 2528.8 FALSE TRUE 2913.001091 2141.761994 2232.061224 2661.855358 3934.767982 4535.643302 3815.296979 3360.163336 2009.305908 2842.086835 1.024951474 0.75358781 0.785359967 0.93658481 1.384464378 1.595884843 1.342428011 1.182287358 0.706982589 1 11.47273492 -6.110556251 5.182082568 1.23640862 0.846906564 0.316613465 0.233803486 0.26327977 10.34173269 0.074455635 0.097670035 7.75E-07 6.110556251 -0.389502056 VGGVS(ph)PEEHPAPEVSTPFPPLPPEPEGGGEEK ddPTM_A459_MK2206_30min_R2 1 VGGVSPEEHPAPEVSTPFPPLPPEPEGGGEEK 32 0 Q8TE77;Q8TE77-3 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 VGGVS(0.965)PEEHPAPEVS(0.017)T(0.017)PFPPLPPEPEGGGEEK 66.642 0.00014868 4021400 19686 15531 19042 17064 18016 12888 23236 15618 14182 21772 TRUE FALSE 21193.1753 14759.75312 19676.85078 15669.81661 17308.60132 13378.46187 20185.08529 17659.32622 15415.52472 21061.58142 1.006248053 0.700790355 0.934253244 0.744000002 0.821809197 0.635206901 0.958384125 0.838461551 0.73192627 1 14.36232615 -9.951496514 8.666602799 1.000002721 0.816063073 0.185394368 0.113665332 0 0 0.10282014 0.024937547 1.12E-10 9.951496514 -0.183939648 VGGVSPEEHPAPEVS(ph)TPFPPLPPEPEGGGEEK ddPTM_A459_MK2206_30min_R1 1 VGGVSPEEHPAPEVSTPFPPLPPEPEGGGEEK 32 0 Q8TE77;Q8TE77-3 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 VGGVS(0.179)PEEHPAPEVS(0.41)T(0.41)PFPPLPPEPEGGGEEK 80.067 5.70E-06 6283100 643.16 728.95 873.71 603.25 349.07 509.45 534.5 499.88 680.41 593.72 TRUE FALSE 588.4558646 681.4952225 814.4049995 649.7124195 335.1658027 538.2946187 498.8444803 495.5096019 751.1410544 667.274516 0.881879722 1.021311628 1.220494684 0.973680852 0.502290729 0.806706394 0.747585092 0.742587331 1.125685211 1 9.382136596 -6.014834388 24.90687237 0.79760975 1.048878793 0.249243862 0.173067033 794.0907187 1333276.928 0.050276806 0.067345287 9.66E-07 6.014834388 0.251269042 VGGYATSPSS(ph)PKK ddPTM_A459_MK2206_30min_R2 1 VGGYATSPSSPKK 13 1 C9JRL6;O95834-2;O95834-3;K7ESL7 C9JRL6 EML2 Echinoderm microtubule-associated protein-like 2 1 VGGYAT(0.017)S(0.026)PS(0.203)S(0.754)PKK 66.674 0.037065 5175200 51287 47014 43630 39278 44689 37916 64568 41175 32382 57175 TRUE FALSE 55213.57215 44679.35312 45084.60242 36068.86176 42934.28532 39358.91995 56090.14404 46556.71387 35198.52783 55309.38443 0.998267703 0.807807817 0.815134771 0.652129148 0.776256792 0.711613777 1.014116223 0.841750715 0.636393411 1 15.75523667 -9.385131394 14.95884221 0.999991503 0.805271186 0.190630228 0.119951706 0 0 0.117538985 0.028507391 4.12E-10 9.385131394 -0.194720318 VGIDT(ph)PDIDIHGPEGK ddPTM_A459_MK2206_30min_R1 4 VGIDTPDIDIHGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VGIDT(1)PDIDIHGPEGK;VGIDT(1)PDIDIHGPEGK;VGIDT(1)PDIDIHGPEGK;VGIDT(1)PDIDIHGPEGK 180.76 1.36E-06 52383900 14810.5 13050.4 13272.5 12440.5 13821.9 10631 12182.3 13077.5 10203.5 10718.4 TRUE FALSE 13550.7892 12200.81659 12371.59968 13398.66947 13271.34445 11232.91803 11369.64099 12963.1648 11264.19034 12046.27631 1.124894436 1.012828884 1.027006135 1.11226649 1.101696832 0.932480523 0.943830334 1.076113851 0.935076537 1 13.55629964 -6.754688733 24.99983632 0.980152993 1.071565551 0.479374711 0.051059045 158.0402565 585274.2547 0.017456206 0.017076937 1.76E-07 6.754688733 0.091412558 VGIDT(ph)PDIDIHGPEGK ddPTM_A459_MK2206_30min_R2 2 VGIDTPDIDIHGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VGIDT(1)PDIDIHGPEGK;VGIDT(1)PDIDIHGPEGK 171.29 1.11E-05 14630600 85274 77219 88802 87028 100118 82211 107718 62288 77596 141019 TRUE FALSE 91802.643 73384.41675 91762.61436 79917.53401 96186.86427 85339.59721 93574.49721 70429.25547 84345.15982 136417.5616 0.672953262 0.53793966 0.672659834 0.585830249 0.705091508 0.625576328 0.685941723 0.516277044 0.61828667 1 17.05766985 -10.64949512 5.305156522 1.000008762 0.62326427 0.780461562 0.059741996 5.95E-06 9.80E-07 0.055621403 0.013489858 2.24E-11 10.64949512 -0.376744492 VGINYQPPTVVPGGDLAK ddPTM_A459_MK2206_30min_R1 2 VGINYQPPTVVPGGDLAK 18 0 Q9BQE3;F5H5D3;A0A1W2PQM2;Q9NY65;Q9NY65-2;C9J2C0;V9GZ17;P68363;P68363-2;P68366-2;P68366 Q9BQE3;P68363;P68366-2 TUBA1C;TUBA8;TUBA1B;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ; 183.96 7.41E-09 19694600 5916.3 6847.3 6333 6126.9 6249.6 7147.4 6215.3 5871.4 5641.1 6306 FALSE TRUE 5413.087617 6401.539525 5903.133605 6598.7949 6000.665198 7552.079611 5800.688677 5820.066969 6227.512532 7087.234888 0.763779909 0.90324924 0.832924786 0.931081727 0.846686372 1.06558901 0.818469935 0.821204188 0.878694248 1 12.79100715 -4.031458726 1.56581785 0.896482798 5.13E-15 0.210605069 0.077297826 17.05366403 6.859920408 0.021164039 41.49800783 9.30E-05 4.031458726 -0.896482798 VGINYQPPTVVPGGDLAK ddPTM_A459_MK2206_30min_R2 2 VGINYQPPTVVPGGDLAK 18 0 Q9BQE3;F5H5D3;A0A1W2PQM2;Q9NY65;Q9NY65-2;C9J2C0;V9GZ17;P68363;P68363-2;P68366-2;P68366 Q9BQE3;P68363;P68366-2 TUBA1C;TUBA8;TUBA1B;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ; 131.53 0.0085053 3138800 38001 38340 42103 44352 39821 33088 46402 36070.1 37326 38070 FALSE TRUE 40910.38578 36436.09135 43506.69301 40728.29972 38257.42746 34347.18703 40309.36166 40784.58592 40572.54801 36827.77902 1.110856719 0.989364342 1.181355329 1.105912461 1.038819839 0.932643454 1.094536861 1.107440823 1.10168327 1 15.16850677 -4.45503302 22.34920026 1.065182314 2.610451722 0.041936346 0.068842962 1564.334914 590677.4568 0.01717051 17655.63057 3.51E-05 4.45503302 1.545269408 VGLSPDSPAGDRNS(ph)VGSEGSVGSIR ddPTM_A459_MK2206_30min_R2 1 VGLSPDSPAGDRNSVGSEGSVGSIR 25 1 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 VGLSPDS(0.002)PAGDRNS(0.762)VGS(0.111)EGS(0.111)VGS(0.014)IR 59.242 0.0045877 23382000 69366 63383 60354 68682 65004 61881 73999 52818 59969 58566 TRUE FALSE 74676.71429 60235.49239 62366.17224 63070.4609 62451.61634 64235.92482 64282.84241 59721.49395 65184.99522 56654.99622 1.318095831 1.063198242 1.10080622 1.113237404 1.102314368 1.133808651 1.134636779 1.054125813 1.150560402 1 15.78991557 -1.90396996 0.014694404 3.13E-07 2.434785184 0.322215798 0.065443085 7359.38773 8.910944393 600.8927265 903.8443867 0.012474698 1.90396996 2.434784871 VGLVEDSPSTAGDGDDSPVVSLTVPS(ph)TSPPSSSGLSR ddPTM_A459_MK2206_30min_R2 1 VGLVEDSPSTAGDGDDSPVVSLTVPSTSPPSSSGLSR 37 0 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 VGLVEDSPSTAGDGDDSPVVS(0.001)LTVPS(0.331)T(0.331)S(0.331)PPS(0.004)S(0.001)S(0.001)GLSR 97.479 4.89E-14 5538300 17624 25738 22166 24535 20754 25880 29497 23449 24685 24779 TRUE FALSE 18973.30699 24459.88835 22905.00338 22530.41202 19939.09368 26864.88153 25624.00847 26513.86481 26832.05668 23970.46326 0.79152859 1.02041784 0.955551135 0.939923929 0.831819288 1.120749367 1.068982614 1.106105649 1.11937998 1 14.54897017 -6.773025167 24.9999954 1.088796345 0.918534177 0.620949948 0.068111181 150.0612139 323802.5246 0.023355681 0.020768983 1.69E-07 6.773025167 -0.170262168 VGLVEDSPSTAGDGDDSPVVSLTVPSTS(ph)PPSSSGLSR ddPTM_A459_MK2206_30min_R1 1 VGLVEDSPSTAGDGDDSPVVSLTVPSTSPPSSSGLSR 37 0 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 VGLVEDSPSTAGDGDDSPVVSLTVPS(0.009)T(0.1)S(0.885)PPS(0.005)SSGLSR 183.42 4.04E-51 3553900 1482.2 1401.7 1211.3 994.49 1607.2 1354.4 1340.9 1364.8 1238.9 1200.6 TRUE FALSE 1356.131107 1310.449075 1129.080331 1071.085792 1543.181821 1431.084958 1251.451008 1352.867697 1367.688088 1349.339392 1.005033363 0.971178254 0.836765263 0.793785313 1.143657281 1.060581916 0.927454586 1.002614839 1.013598281 1 10.39803755 -6.257442778 24.99685097 1.021718601 0.902016442 0.386418653 0.075851992 425.6275145 2662098.568 0.024753756 0.030794703 5.53E-07 6.257442778 -0.119702159 VGLVEDSPSTAGDGDDSPVVSLTVPSTS(ph)PPSSSGLSR ddPTM_A459_MK2206_30min_R2 3 VGLVEDSPSTAGDGDDSPVVSLTVPSTSPPSSSGLSR 37 0 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 VGLVEDSPSTAGDGDDS(0.001)PVVS(0.012)LT(0.003)VPS(0.257)T(0.257)S(0.351)PPS(0.056)S(0.023)S(0.023)GLS(0.017)R;VGLVEDSPSTAGDGDDSPVVS(0.003)LT(0.003)VPS(0.216)T(0.216)S(0.449)PPS(0.039)S(0.016)S(0.039)GLS(0.02)R;VGLVEDSPSTAGDGDDS(0.001)PVVS(0.006)LT(0.004)VPS(0.163)T(0.163)S(0.544)PPS(0.05)S(0.013)S(0.04)GLS(0.016)R 84.644 2.33E-09 7516200 10290.5 13252.3 12479.2 13264.5 15497.2 13103.3 12366.6 12856.1 15928.7 14211 TRUE FALSE 11078.34859 12594.21005 12895.2503 12180.74792 14888.70206 13601.95526 10742.85057 14536.43641 17314.14953 13747.29623 0.805856541 0.916122693 0.938020836 0.886046806 1.083027659 0.989427669 0.781451886 1.057403301 1.259458532 1 13.74686028 -3.145279074 0.236763972 1.075225513 0.342434241 0.291344622 0.112601293 34.96189416 0.898332622 0.174206019 8.557050489 0.000715683 3.145279074 -0.732791272 VGNES(ph)PVQELK ddPTM_A459_MK2206_30min_R1 4 VGNESPVQELK 11 0 Q5JSH3-2;Q5JSH3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 VGNES(1)PVQELK;VGNES(1)PVQELK;VGNES(1)PVQELK;VGNES(1)PVQELK 126.5 0.0031469 250650000 24871.6 25263.4 26253.2 21777.2 20903.2 19402.9 23186.4 21686.4 24436 22784.3 TRUE FALSE 22756.13981 23618.74807 24471.20593 23454.48372 20070.58128 20501.47543 21639.67756 21496.79809 26976.20965 25606.9911 0.888669025 0.922355461 0.955645505 0.915940636 0.783793035 0.800620243 0.845069125 0.83948942 1.053470497 1 14.64425012 -8.262111958 24.99862087 1.026735264 0.869272377 0.589361603 0.052682535 48.05997504 1786110.96 0.048524838 0.015374516 5.47E-09 8.262111958 -0.157462887 VGNES(ph)PVQELK ddPTM_A459_MK2206_30min_R2 4 VGNESPVQELK 11 0 Q5JSH3-2;Q5JSH3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 VGNES(1)PVQELK;VGNES(1)PVQELK;VGNES(1)PVQELK;VGNES(1)PVQELK 189.99 1.97E-05 264989000 630760 675830 633160 644180 627710 458247 736390 520110 507314 673970 TRUE FALSE 679051.4706 642269.2649 654269.2384 591548.4334 603062.9514 475685.9107 639701.1084 588090.1628 551439.2547 651978.4141 1.041524468 0.985108174 1.003513651 0.907312912 0.9249738 0.729603773 0.981169153 0.90200864 0.84579373 1 19.31446467 -5.792836121 2.352157494 0.888744073 1.013301606 0.333020372 0.071629585 0.327579741 3.697477818 0.021080364 0.038196505 1.61E-06 5.792836121 0.124557533 VGPAT(ph)PSAQVGK ddPTM_A459_MK2206_30min_R1 1 VGPATPSAQVGK 12 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 VGPAT(0.595)PS(0.405)AQVGK 115.37 0.01233 32033000 5028.8 4670.2 4719.6 3364.8 3364.4 3985.7 4752 4146.7 4976 4884.6 TRUE FALSE 4601.074153 4366.169131 4399.246702 3623.957479 3230.388824 4211.36689 4435.002751 4110.445839 5493.273007 5489.741125 0.838122244 0.795332427 0.801357769 0.660132672 0.588441012 0.767133967 0.807871018 0.748750396 1.00064336 1 12.4225224 -8.26116328 10.8210901 1.00050564 0.748031129 0.663997152 0.070950024 0.051683864 281.5082849 0.062292492 0.020053561 5.48E-09 8.26116328 -0.252474511 VGPAT(ph)PSAQVGK ddPTM_A459_MK2206_30min_R2 2 VGPATPSAQVGK 12 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 VGPAT(0.5)PS(0.5)AQVGK;VGPAT(0.792)PS(0.208)AQVGK 147.52 0.0014672 67921000 100231 92378 81686 89179 81918 68893 97977 73884 67989 91091 TRUE FALSE 107904.7624 87790.64285 84409.37047 81892.79043 78701.48772 71514.77139 85112.50221 83540.89248 73902.56032 88118.70813 1.224538633 0.996277008 0.95790522 0.929346244 0.893130294 0.81157308 0.965884589 0.948049447 0.838670492 1 16.42716072 -3.634230644 1.009018057 0.907271135 3.737263905 0.747902737 0.053871844 7.594958329 1.026392288 0.016924241 39.46282363 0.00023215 3.634230644 2.82999277 VGPCS(ph)SPPAAR ddPTM_A459_MK2206_30min_R1 1 VGPCSSPPAAR 11 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0J9YYG8;A0A0A0MSL1 Q8TDM6-4 DLG5 Disks large homolog 5 1 VGPCS(0.62)S(0.38)PPAAR 117.02 0.0057189 31278000 3849.2 3445.9 3117.6 3254.8 3735.2 3149.7 3304.3 3052.9 2864.2 2514.9 TRUE FALSE 3521.805327 3221.571284 2905.985998 3505.48526 3586.419075 3328.033292 3083.876176 3026.208817 3161.94384 2826.464799 1.246010681 1.139788221 1.028134509 1.24023666 1.26887095 1.177454357 1.09107185 1.070669204 1.1186921 1 11.46478301 -7.30578545 4.130399706 1.073383099 1.181206245 0.392535462 0.069287098 0.283314493 10.58006752 0.032233186 0.021737175 4.95E-08 7.30578545 0.107823146 VGPCSS(ph)PPAAR ddPTM_A459_MK2206_30min_R1 1 VGPCSSPPAAR 11 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0J9YYG8;A0A0A0MSL1 Q8TDM6-4 DLG5 Disks large homolog 5 1 VGPCS(0.054)S(0.946)PPAAR 96.756 0.019916 31649000 3088.2 2855.9 2980.9 2299.7 2780 2645.5 2938.7 2997.9 2259.9 2156.7 TRUE FALSE 2825.532373 2669.980391 2778.564813 2476.823292 2669.266713 2795.285924 2742.664685 2971.689676 2494.824692 2423.888278 1.165702396 1.101527828 1.146325447 1.021838884 1.101233393 1.153223913 1.13151448 1.226001092 1.029265546 1 11.24310749 -8.498398701 21.328846 0.999999968 1.126657346 0.469426849 0.049774174 86.52118655 75383.28463 0.049169218 0.01269544 3.17E-09 8.498398701 0.126657377 VGPCSS(ph)PPAAR ddPTM_A459_MK2206_30min_R2 2 VGPCSSPPAAR 11 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0J9YYG8;A0A0A0MSL1 Q8TDM6-4 DLG5 Disks large homolog 5 1 VGPCS(0.155)S(0.845)PPAAR;VGPCS(0.398)S(0.602)PPAAR 100.82 0.015887 64848000 45955 58377 51267 56894 55625 57211 54187 48405 53741 47901 TRUE FALSE 49473.35013 55478.08307 52976.21619 52245.57821 53440.88301 59388.20469 47072.18181 54731.6997 58415.29504 46337.99429 1.067662744 1.197248261 1.143256565 1.127488986 1.153284337 1.281630886 1.01584418 1.181140887 1.260634948 1 15.49990798 -4.74333473 24.53187953 1.155757277 1.067662392 0.075994916 0.08602721 2465.705064 3340816.33 0.020265636 0.637219686 1.81E-05 4.74333473 -0.088094885 VGQQAIVLCIS(ph)PSKPNPVFK ddPTM_A459_MK2206_30min_R1 1 VGQQAIVLCISPSKPNPVFK 20 1 C9JP85;Q16656-2;Q16656;Q16656-4 C9JP85 NRF1 Nuclear respiratory factor 1 1 VGQQAIVLCIS(0.624)PS(0.376)KPNPVFK 73.459 0.0040608 31213000 5313.8 5707.9 6565.2 5517.3 4094.7 4134.5 4851 5255.5 4784.5 3996.8 TRUE FALSE 4861.833406 5336.314673 6119.572516 5942.243402 3931.599428 4368.591817 4527.398641 5209.551718 5281.865897 4491.953758 1.08234271 1.187971863 1.362340942 1.322863885 0.875253763 0.97253713 1.00789075 1.159751858 1.175850461 1 12.13312736 -6.247055287 24.99848319 1.035701575 1.244062218 0.468786211 0.107847296 814.7009642 1415889.549 0.035242524 0.045287579 5.66E-07 6.247055287 0.208360643 VGQQAIVLCIS(ph)PSKPNPVFK ddPTM_A459_MK2206_30min_R2 1 VGQQAIVLCISPSKPNPVFK 20 1 C9JP85;Q16656-2;Q16656;Q16656-4 C9JP85 NRF1 Nuclear respiratory factor 1 1 VGQQAIVLCIS(0.859)PS(0.141)KPNPVFK 81.922 0.0019307 28035000 111980 118180 114650 121360 132560 92608 146160 98179 104900 123950 TRUE FALSE 120553.2749 112311.353 118472.3738 111444.4998 127355.0283 96132.26233 126969.0164 111011.3324 114024.0124 119905.5217 1.005402197 0.936665397 0.988047691 0.929435928 1.062128137 0.801733407 1.058908837 0.925823356 0.950948804 1 16.87153857 VGQQAIVLCISPS(ph)KPNPVFK ddPTM_A459_MK2206_30min_R1 1 VGQQAIVLCISPSKPNPVFK 20 1 C9JP85;Q16656-2;Q16656;Q16656-4 C9JP85 NRF1 Nuclear respiratory factor 1 1 VGQQAIVLCIS(0.27)PS(0.73)KPNPVFK 74.993 0.0034396 21273000 3221.3 3320.6 3578.6 3314.6 3068.8 2396.6 2734.9 3041.2 3113.9 2366.1 TRUE FALSE 2947.311519 3104.428336 3335.694603 3569.891066 2946.563198 2532.293421 2552.459811 3014.611109 3437.601048 2659.230331 1.108332544 1.167416113 1.254383482 1.342452748 1.108051139 0.952265545 0.959849089 1.133640465 1.292705264 1 11.37679303 -6.506111252 24.2884593 1.06495485 1.218128654 0.305055187 0.107680564 676.7131028 980250.7954 0.036565447 0.040425774 3.12E-07 6.506111252 0.153173804 VGQQAIVLCISPS(ph)KPNPVFK ddPTM_A459_MK2206_30min_R2 1 VGQQAIVLCISPSKPNPVFK 20 1 C9JP85;Q16656-2;Q16656;Q16656-4 C9JP85 NRF1 Nuclear respiratory factor 1 1 VGQQAIVLCIS(0.238)PS(0.762)KPNPVFK 90.06 0.0009596 25584000 76673 79353 85533 88112 80714 56978 102630 79957 59325 86665 TRUE FALSE 82543.14383 75412.44541 88384.62753 80912.96774 77544.7628 59146.33772 89154.55772 90407.65443 64484.98126 83837.12815 0.984565498 0.899511315 1.05424207 0.965120938 0.924945362 0.70549098 1.063425712 1.078372511 0.769169731 1 16.35530168 -6.218204557 5.498534385 0.923561396 0.976623756 0.047475901 0.115268861 0.818078503 63.33401675 0.035529913 0.045466105 6.05E-07 6.218204557 0.05306236 VGS(ph)AQPSPPDDLDAGGLAQR ddPTM_A459_MK2206_30min_R2 2 VGSAQPSPPDDLDAGGLAQR 20 0 Q8N3D4;E9PIH6;H0YDZ9;A0A0U1RQH4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 VGS(0.699)AQPS(0.301)PPDDLDAGGLAQR;VGS(0.976)AQPS(0.024)PPDDLDAGGLAQR 202.61 6.49E-16 5916300 40753 47630 41266 49359 44453 46103 49619 37862 43688 43949 TRUE FALSE 43873.08101 45264.76346 42641.78784 45326.21181 42707.55186 47857.48197 43103.9657 42810.6934 47487.90327 42514.94773 1.031944842 1.064678798 1.002983424 1.066124133 1.004530269 1.125662491 1.013854374 1.006956275 1.116969579 1 15.37568254 VGS(ph)GSLDNLGR ddPTM_A459_MK2206_30min_R1 1 VGSGSLDNLGR 11 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VGS(0.767)GS(0.233)LDNLGR 103.14 0.01359 15059000 717.82 1154 999.02 917.74 677.7 874.25 901.5 1043.1 944.97 899.05 TRUE FALSE 656.7656396 1078.87439 931.2093058 988.4244938 650.7057739 923.7492795 841.3625799 1033.980287 1043.203013 1010.431101 0.649985574 1.06773672 0.921596044 0.978220576 0.643988267 0.914213031 0.832676843 1.023306077 1.032433594 1 9.980755236 -7.768995047 24.51933697 1.020902461 0.867346375 0.25417256 0.125100398 205.4248276 666620.0318 0.065807914 0.032610938 1.70E-08 7.768995047 -0.153556086 VGS(ph)LDNVGHLPAGGAVK ddPTM_A459_MK2206_30min_R1 3 VGSLDNVGHLPAGGAVK 17 0 E7EVA0;P27816-4;H0Y2V1;H7C4C5;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK 118.44 0.0010216 194422700 23172.7 28490.6 26303.2 26954.9 15983.1 13942.6 16564.7 17723.4 24878.6 21043.9 TRUE FALSE 21201.74018 26635.85676 24517.81207 29030.97107 15346.45928 14732.01796 15459.69909 17568.44618 27464.8195 23650.97721 0.89644246 1.126205337 1.036651123 1.227474485 0.648872102 0.62289257 0.653660056 0.742821154 1.161255168 1 14.52961217 -6.264703182 24.98684301 0.775393846 1.073084049 0.345484833 0.177107117 302.4662497 2315601.575 0.055221647 0.065217516 5.44E-07 6.264703182 0.297690203 VGS(ph)LDNVGHLPAGGAVK ddPTM_A459_MK2206_30min_R2 4 VGSLDNVGHLPAGGAVK 17 0 E7EVA0;P27816-4;H0Y2V1;H7C4C5;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK 118.84 0.0010112 165557300 564314 519803 524640 440198 412517 303054 608595 459639 354143 563121 TRUE FALSE 607518.3137 493990.3389 542131.2357 404232.4153 396319.5098 314586.9323 528685.7454 519715.3955 384945.718 544746.4079 1.115231427 0.906826244 0.995199285 0.742056137 0.727530286 0.57749244 0.970517176 0.954050156 0.706651228 1 19.05522525 -5.749791153 24.50480084 0.802686768 0.995859823 0.302518376 0.134702385 228.1704067 480004.6594 0.037761517 0.064681614 1.78E-06 5.749791153 0.193173055 VGS(ph)LTPPS(ph)SPK ddPTM_A459_MK2206_30min_R2 1 VGSLTPPSSPK 11 0 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 2 VGS(0.982)LT(0.018)PPS(0.601)S(0.399)PK 129.34 0.047376 25161000 156960 153390 161300 140940 163540 114100 181710 147710 121460 191720 TRUE FALSE 168976.9783 145772.8756 166677.6615 129424.7512 157118.5979 118442.1555 157851.2587 167016.2042 132024.3713 185464.1921 0.911102981 0.785989328 0.898705349 0.697842261 0.84716406 0.638625462 0.851114476 0.900530729 0.711859091 1 17.50078114 -11.10066347 6.30499897 1.000425947 0.804375673 0.296800761 0.090149786 0.000518865 3.47E-05 0.083906805 0.020306952 7.93E-12 11.10066347 -0.196050275 VGS(ph)LTPPSS(ph)PK ddPTM_A459_MK2206_30min_R1 1 VGSLTPPSSPK 11 0 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 2 VGS(0.921)LT(0.079)PPS(0.381)S(0.619)PK 145.09 0.012885 26067000 16210 21779 21811 18566 12833 10581 13920 14455 16791 16528 TRUE FALSE 14831.25438 20361.18314 20330.53009 19995.95654 12321.83444 11180.08708 12991.4222 14328.62146 18536.48454 18575.61342 0.798426089 1.096124401 1.094474224 1.076462784 0.663333918 0.601869065 0.699380521 0.771367337 0.997893535 1 14.18112223 -6.254560202 24.98526572 0.763707501 1.027647233 0.357521742 0.14670402 546.1187395 1983509.179 0.044755323 0.056487384 5.56E-07 6.254560202 0.263939732 VGS(ph)LTPPSSPK ddPTM_A459_MK2206_30min_R2 2 VGSLTPPSSPK 11 0 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 1 VGS(0.836)LT(0.163)PPS(0.001)SPK;VGS(0.981)LT(0.019)PPSSPK 101.35 0.015361 16857400 232600 301050 254670 260150 281230 226880 270360 211710 207448 220040 TRUE FALSE 250408.0348 286100.2948 263160.5707 238894.9128 270187.4971 235514.0774 234861.4072 239381.2239 225491.4521 212860.1128 1.176397172 1.344076591 1.236307579 1.122309434 1.269319524 1.106426536 1.103360344 1.124594085 1.059341034 1 17.69954611 -7.146981622 0.363771296 0.997039292 1.289868954 0.634695092 0.059242857 0.926027021 0.291215563 0.069482574 0.097972027 7.13E-08 7.146981622 0.292829663 VGS(ph)PATVTFQQNK ddPTM_A459_MK2206_30min_R2 1 VGSPATVTFQQNK 13 0 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-2;F5GXF5;J3QQK4 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 VGS(0.988)PAT(0.009)VT(0.003)FQQNK 153 0.00042345 3650700 22314 21865 20479 17337 17787 13479 22077 16520 12083 21937 TRUE FALSE 24022.377 20779.21589 21161.75964 15920.51164 17088.59301 13991.95279 19178.26338 18679.22072 13133.9575 21221.19749 1.131999125 0.979172637 0.997199128 0.750217402 0.805260543 0.659338513 0.903731441 0.880215206 0.618907463 1 14.37321845 -5.669623846 4.652766312 0.796032533 1.039931338 0.47938207 0.111961996 0.17609098 6.611955619 0.029890723 0.052789564 2.14E-06 5.669623846 0.243898805 VGS(ph)PLTLTDAQTR ddPTM_A459_MK2206_30min_R1 4 VGSPLTLTDAQTR 13 0 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 VGS(0.997)PLT(0.003)LT(0.001)DAQTR;VGS(0.999)PLT(0.001)LTDAQTR;VGS(0.965)PLT(0.015)LT(0.021)DAQTR;VGS(0.999)PLT(0.001)LTDAQTR 184 0.00012206 178789000 8893.8 11109.4 10098.2 10001.8 7262.9 6492.5 7237.1 7734.2 10967.7 9582.2 TRUE FALSE 8137.335607 10386.17604 9412.762319 10772.14037 6973.603314 6860.099739 6754.326264 7666.580705 12107.83166 10769.31528 0.755603806 0.964423064 0.874035357 1.000262328 0.647543798 0.637004263 0.627182517 0.711891193 1.124289832 1 13.3946389 -6.257783734 24.96808279 0.760990641 0.901530857 0.074654266 0.165355378 655.1096558 4474401.896 0.050169744 0.062219257 5.52E-07 6.257783734 0.140540217 VGS(ph)PLTLTDAQTR ddPTM_A459_MK2206_30min_R2 4 VGSPLTLTDAQTR 13 0 Q99569-2;Q99569;A0A0D9SF60 Q99569-2 PKP4 Plakophilin-4 1 VGS(1)PLTLTDAQTR;VGS(1)PLTLTDAQTR;VGS(0.87)PLT(0.079)LT(0.051)DAQTR;VGS(0.99)PLT(0.001)LT(0.008)DAQTR 158.89 0.00036446 177546000 221198 178266 177947 150626 168390 126360 211828 176427 164042 199335 TRUE FALSE 238133.089 169413.5697 183879.6642 138319.374 161778.1625 131168.7183 184014.7291 199486.6147 178310.0766 192830.7153 1.23493339 0.878561122 0.953580781 0.717309863 0.838964696 0.680227308 0.954281214 1.034516801 0.924697481 1 17.55697535 -10.44513918 18.33285769 1 0.903195875 0.026088633 0.148965345 0 0 0.14833454 0.03597641 3.59E-11 10.44513918 -0.096804125 VGS(ph)PQPSSSGGEK ddPTM_A459_MK2206_30min_R2 3 VGSPQPSSSGGEK 13 0 V9GYB6;O94761 V9GYB6 RECQL4 ATP-dependent DNA helicase Q4 1 VGS(0.998)PQPS(0.001)SSGGEK;VGS(0.883)PQPS(0.036)S(0.075)S(0.006)GGEK;VGS(0.861)PQPS(0.032)S(0.065)S(0.042)GGEK 130.47 0.0016218 25600000 140369 137073 143719 129216 132525 125265 151855 112332 111911 147738 TRUE FALSE 151115.7586 130266.1541 148510.5197 118658.6395 127321.4026 130032.0474 131916.2561 127014.1781 121644.8165 142917.3212 1.057364897 0.91147912 1.039135904 0.83026073 0.890874539 0.909841063 0.92302497 0.888724873 0.851155168 1 17.12482125 -5.754343197 24.9999995 0.895587893 0.993541887 0.416567186 0.055727523 160.7656052 566373.9807 0.014326419 0.024157376 1.76E-06 5.754343197 0.097953994 VGS(ph)PSGDAASSTPPSTR ddPTM_A459_MK2206_30min_R1 2 VGSPSGDAASSTPPSTR 17 0 F8WEJ1;C9JF34;C9J222;F8WB78;F8WDE4;Q9H980;Q6PIY2;Q9NP87-2;Q9NP87;Q9NP87-3 F8WEJ1 POLM DNA-directed DNA/RNA polymerase mu 1 VGS(0.978)PS(0.022)GDAASSTPPSTR;VGS(0.911)PS(0.089)GDAASSTPPSTR 211.49 2.77E-09 14635700 1958.51 2544.6 2377.54 1973.01 1933.65 1450.75 2032.15 1748.53 1784.35 1784.91 TRUE FALSE 1791.92844 2378.946077 2216.159209 2124.971572 1856.628626 1532.890211 1896.588981 1733.242787 1969.839568 2006.038126 0.893267389 1.185892754 1.104744312 1.05928773 0.925520109 0.764138124 0.945440147 0.864012884 0.981955199 1 10.97013331 -6.275735551 4.385049302 0.899254704 1.07452148 0.373953625 0.092206078 0.190379408 9.382523798 0.027952815 0.033695663 5.30E-07 6.275735551 0.175266776 VGS(ph)PSGDAASSTPPSTR ddPTM_A459_MK2206_30min_R2 2 VGSPSGDAASSTPPSTR 17 0 F8WEJ1;C9JF34;C9J222;F8WB78;F8WDE4;Q9H980;Q6PIY2;Q9NP87-2;Q9NP87;Q9NP87-3 F8WEJ1 POLM DNA-directed DNA/RNA polymerase mu 1 VGS(0.791)PS(0.18)GDAAS(0.026)S(0.001)TPPSTR;VGS(0.755)PS(0.242)GDAAS(0.003)S(0.001)TPPSTR 117.53 0.0017118 11747000 20507.3 26153 22751.7 25088 24366.8 20757.9 24025.1 19933 17533.9 22892 TRUE FALSE 22077.35466 24854.28005 23510.23032 23038.23015 23410.037 21547.85643 20870.57551 22538.31154 19058.96693 22145.03591 0.996943728 1.122340923 1.061647875 1.040333835 1.05712346 0.973033257 0.942449386 1.017759087 0.860642855 1 14.43469572 -6.799621696 3.924746214 0.956750713 1.059690574 0.503271252 0.04827668 0.177500351 5.788203533 0.016517019 0.0150257 1.59E-07 6.799621696 0.10293986 VGS(ph)TENIK ddPTM_A459_MK2206_30min_R2 3 VGSTENIK 8 0 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VGS(0.5)T(0.5)ENIK;VGS(0.5)T(0.5)ENIK;VGS(0.539)T(0.461)ENIK 110.54 0.011981 152002000 536941 427047 479919 310959 339616 249664 519183 398197 257070 483730 TRUE FALSE 578049.6158 405840.467 495919.2599 285552.655 326280.9694 259165.1385 451013.6484 450242.7151 279429.4839 467945.9297 1.235291471 0.867280686 1.05977898 0.610225748 0.697262117 0.553835651 0.963815731 0.962168247 0.597140537 1 18.83598231 -4.185309019 1.011042813 0.778672075 2.184624879 0.360345737 0.173949568 6.106029555 2.16097241 0.056338657 12.44146211 6.53E-05 4.185309019 1.405952805 VGSAQPS(ph)PPDDLDAGGLAQR ddPTM_A459_MK2206_30min_R1 1 VGSAQPSPPDDLDAGGLAQR 20 0 Q8N3D4;E9PIH6;H0YDZ9;A0A0U1RQH4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 VGS(0.343)AQPS(0.657)PPDDLDAGGLAQR 126.26 0.00074268 0 633.56 610.86 575.2 296.72 494.39 467.96 534.29 569.04 625.03 441.13 TRUE FALSE 579.672395 571.092903 536.1570266 319.5734258 474.6973994 494.4554908 498.648489 564.0649433 690.0041052 495.7805148 1.169211733 1.151906713 1.081440296 0.644586498 0.957474901 0.997327398 1.005784766 1.137731166 1.391753174 1 8.953557761 -7.859724072 3.826593291 1.214651843 0.993892484 0.196788971 0.162828422 0.347573741 9.494706116 0.103116979 0.046259607 1.38E-08 7.859724072 -0.220759359 VGSAQPS(ph)PPDDLDAGGLAQR ddPTM_A459_MK2206_30min_R2 1 VGSAQPSPPDDLDAGGLAQR 20 0 Q8N3D4;E9PIH6;H0YDZ9;A0A0U1RQH4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 VGS(0.133)AQPS(0.867)PPDDLDAGGLAQR 222.54 1.37E-53 0 11894 14153 12854 14010 12099 13636 14231 9351.3 12361 8947.4 TRUE FALSE 12804.61378 13450.1826 13282.54594 12865.33818 11623.93247 14154.92754 12362.45261 10573.54702 13436.13744 8655.447071 1.479370584 1.553955849 1.534588085 1.486386327 1.342961533 1.635377979 1.428285853 1.221606109 1.552333152 1 13.07939262 -12.78306016 0.215888297 1.63E-14 1.543920634 0.630546507 0.109501406 40.41379153 0.789205232 18.34202921 0.224721382 1.65E-13 12.78306016 1.543920634 VGSGQGGS(ph)PCWK ddPTM_A459_MK2206_30min_R1 2 VGSGQGGSPCWK 12 0 Q9UMN6;A0A669KBI7;Q9UMN6-2 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 VGSGQGGS(1)PCWK;VGS(0.001)GQGGS(0.999)PCWK 112.02 0.0065522 29793000 3628 3559.9 3781.2 2897.4 3560.5 2966.68 3134.49 2927.19 3416.3 2529.95 TRUE FALSE 3319.419549 3328.149863 3524.542679 3120.55825 3418.677746 3134.650858 2925.393891 2901.597886 3771.43661 2843.379306 1.167420591 1.170490991 1.239561205 1.097482226 1.202329122 1.102438514 1.028844054 1.020475137 1.326392368 1 11.47339085 -6.838939662 6.672948924 1.09183364 1.174262871 0.159927219 0.091418206 0.414390738 28.84401968 0.031639372 0.027983227 1.45E-07 6.838939662 0.08242923 VGSGQGGS(ph)PCWK ddPTM_A459_MK2206_30min_R2 4 VGSGQGGSPCWK 12 0 Q9UMN6;A0A669KBI7;Q9UMN6-2 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 VGSGQGGS(1)PCWK;VGSGQGGS(1)PCWK;VGS(0.18)GQGGS(0.82)PCWK;VGS(0.35)GQGGS(0.65)PCWK 127.18 0.0026302 66995400 142213 156613 136295 152308 141801 132946 169488 116516 120444 140188 TRUE FALSE 153100.9366 148835.8262 140839.0073 139863.9492 136233.1802 138005.3532 147234.022 131745.0413 130920.0014 135613.677 1.128949085 1.09749864 1.038530997 1.031341029 1.004568147 1.017635951 1.085687117 0.971473115 0.965389364 1 17.04914316 -1.522878745 0.395774269 0.998226643 3.191765621 0.65481696 0.030332053 47.69372541 0.63681861 0.023714303 81.29815314 0.03 1.522878745 2.193538978 VGSGS(ph)LDNLGR ddPTM_A459_MK2206_30min_R2 2 VGSGSLDNLGR 11 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VGS(0.004)GS(0.996)LDNLGR;VGS(0.016)GS(0.984)LDNLGR 120.6 0.0035551 5267700 42135 61054 49211 56096 50192 56931 56121 44959 53631 46180 TRUE FALSE 45360.888 58022.14714 50851.67018 51512.77736 48221.20989 59097.5491 48752.24529 50835.29567 58295.72744 44673.15038 1.015394876 1.298814761 1.138304994 1.153103753 1.079422639 1.32288743 1.091309766 1.137938454 1.304938804 1 15.44712038 -10.53294944 5.078368978 0.999998384 1.172003771 0.211018522 0.099388645 1.70E-06 3.31E-07 0.089757188 0.021769111 2.93E-11 10.53294944 0.172005387 VGSMNS(ph)K ddPTM_A459_MK2206_30min_R2 1 VGSMNSK 7 0 O94889-2;O94889 O94889-2 KLHL18 Kelch-like protein 18 1 VGSMNS(1)K 84.359 0.021284 1032700 2971.4 4184 3908.1 6214.7 5368.2 5468.3 5770.3 5432.7 5558.1 4984.5 TRUE FALSE 3198.892669 3976.228644 4038.394103 5706.93913 5157.417495 5676.399988 5012.652679 6142.772543 6041.533491 4821.856173 0.663415198 0.82462614 0.837518573 1.183556482 1.069591732 1.177223 1.039569099 1.273943544 1.252947677 1 12.2353729 -5.669380966 3.629415593 1.148991044 0.759333097 0.772358522 0.091848502 0.104868299 2.661691484 0.02589137 0.04695885 2.14E-06 5.669380966 -0.389657947 VGSPLDYSLVDLPS(ph)TNGQSPGK ddPTM_A459_MK2206_30min_R1 1 VGSPLDYSLVDLPSTNGQSPGK 22 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 VGSPLDYSLVDLPS(0.374)T(0.374)NGQS(0.252)PGK 90.718 0.001395 0 1243.8 1387.4 1541.2 1194.8 1154.8 1050.1 1246.9 1317 1422.9 1434 TRUE FALSE 1138.008279 1297.080008 1436.587638 1286.823703 1108.801871 1109.555755 1163.721576 1305.485608 1570.815547 1611.654746 0.706111704 0.804812576 0.89137431 0.798448741 0.687989703 0.688457473 0.722066298 0.810028085 0.974660082 1 10.654327 -8.223598155 3.096076091 0.999474899 0.760471592 0.698437732 0.059691407 0.161924961 2.917655371 0.059929319 0.017899459 5.98E-09 8.223598155 -0.239003307 VGT(ph)PMS(ph)LTGQRFT(ph)VQMPTSQSPAVK ddPTM_A459_MK2206_30min_R1 1 VGTPMSLTGQRFTVQMPTSQSPAVK 25 1 Q16594 Q16594 TAF9 Transcription initiation factor TFIID subunit 9 3 VGT(0.99)PMS(0.967)LT(0.054)GQRFT(0.973)VQMPT(0.008)S(0.005)QS(0.004)PAVK 55.209 0.027972 0 658.9 921.72 577.79 661.23 594.23 309.03 569.54 444.56 546.65 349.22 TRUE FALSE 602.857095 861.7158605 538.5712246 712.1580492 570.5605608 326.5270115 531.5470258 440.6732588 603.4762237 392.4840101 1.536004218 2.195543865 1.372211888 1.814489332 1.453716702 0.831949845 1.354315111 1.122780158 1.53758168 1 8.616490069 -6.515985197 6.491743741 1.182677483 1.726720906 0.497068198 0.26559744 0.12394938 25.11154508 0.082404471 0.087444564 3.05E-07 6.515985197 0.544043423 VGT(ph)PSQGPFLR ddPTM_A459_MK2206_30min_R1 2 VGTPSQGPFLR 11 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 VGT(0.991)PS(0.009)QGPFLR;VGT(0.983)PS(0.017)QGPFLR 125.03 0.008015 15211400 4484.8 6288.4 6346.2 5511.4 3533.7 3893.5 4576.7 4048.5 5416.7 5467.5 TRUE FALSE 4103.344209 5879.024017 5915.437626 5935.888983 3392.945246 4113.946605 4271.396694 4013.104391 5979.785349 6144.855178 0.667769067 0.956739231 0.9626651 0.965993308 0.552160327 0.669494477 0.695117553 0.653083641 0.973136905 1 12.58516329 -6.232560639 24.83071658 0.732333665 0.898493178 0.134523247 0.154599104 1059.979837 911398.9296 0.044861248 0.057905053 5.85E-07 6.232560639 0.166159513 VGTGEPCCDWVGDEGAGHFVK ddPTM_A459_MK2206_30min_R1 2 VGTGEPCCDWVGDEGAGHFVK 21 0 P52209-2;P52209;K7EM49;K7EPF6 P52209-2 PGD "6-phosphogluconate dehydrogenase, decarboxylating" 0 ; 223.93 8.28E-21 44652000 11360.1 10008.5 10365.6 9760.1 11375.8 9911.4 9923.2 9985.2 9612.8 8792.3 FALSE TRUE 10393.86384 9356.944831 9662.011952 10511.82459 10922.6778 10472.5749 9261.241434 9897.900449 10612.08496 9881.556502 1.051844802 0.946910017 0.977782392 1.063782269 1.105360051 1.059810254 0.937224964 1.001653985 1.073928481 1 13.27052259 -5.746173934 24.97058878 1.034555388 0.987652152 0.126110321 0.050678775 505.1844751 826352.5494 0.01482626 0.025556661 1.79E-06 5.746173934 -0.046903236 VGVAAPPFLGS(ph)PVPFGGFR ddPTM_A459_MK2206_30min_R1 1 VGVAAPPFLGSPVPFGGFR 19 0 Q9BRQ0;Q5T171 Q9BRQ0 PYGO2 Pygopus homolog 2 1 VGVAAPPFLGS(1)PVPFGGFR 120.99 0.00043181 2383600 3118.9 2214.9 2706.4 2003.7 2733.7 2307.4 2626.3 2400.2 2367.6 1783.2 TRUE FALSE 2853.621177 2070.709607 2522.697108 2158.025321 2624.81094 2438.042994 2451.104319 2379.215304 2613.720493 2004.116278 1.423880045 1.033228276 1.258757855 1.076796464 1.309709905 1.216517734 1.223034983 1.187164303 1.30417607 1 10.9687505 -10.96585298 5.925350756 0.999890989 1.217794307 0.282828999 0.107224966 0.000141362 1.33E-05 0.095044748 0.023040256 1.08E-11 10.96585298 0.217903318 VGVEASEETPQT(ph)SSSSARPGTPSDHQSQEASQFER ddPTM_A459_MK2206_30min_R2 1 VGVEASEETPQTSSSSARPGTPSDHQSQEASQFER 35 1 Q6Y7W6;I1E4Y6;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JHW1 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 VGVEASEET(0.005)PQT(0.188)S(0.188)S(0.188)S(0.188)S(0.188)ARPGT(0.047)PS(0.006)DHQSQEASQFER 67.235 4.43E-05 96299000 16816 120430 43906 235650 216570 308450 188540 83240 174370 85468 TRUE FALSE 18103.44589 114449.6213 45369.80413 216396.6412 208066.3736 320188.2809 163784.4715 94119.75381 189536.3874 82679.18616 0.218960137 1.384261586 0.548745171 2.617304926 2.516550819 3.872658837 1.98096376 1.138373007 2.292431702 1 16.33523657 -5.759110994 24.99997811 2.281808212 0.784015967 0.414073842 0.804642872 62.08224464 666561.5695 0.231423499 0.377595675 1.74E-06 5.759110994 -1.497792245 VGVEASEETPQTSSSSARPGT(ph)PSDHQSQEASQFER ddPTM_A459_MK2206_30min_R1 1 VGVEASEETPQTSSSSARPGTPSDHQSQEASQFER 35 1 Q6Y7W6;I1E4Y6;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JHW1 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 VGVEASEET(0.001)PQT(0.096)S(0.122)S(0.122)S(0.122)S(0.122)ARPGT(0.409)PS(0.004)DHQS(0.001)QEASQFER 87.21 5.46E-09 29962000 4041.9 1236.5 1781.1 877.31 7781.8 7315.2 5699.5 3322.5 1086.7 1264.3 TRUE FALSE 3698.11518 1156.003625 1660.203894 944.8805682 7471.834428 7729.380302 5319.296754 3293.451733 1199.666354 1420.931029 2.602600059 0.81355365 1.168391611 0.664972859 5.258407534 5.43965903 3.743529169 2.317812523 0.844281903 1 10.47262081 -4.440144351 21.19269906 2.492963688 8.817276003 0 1.754674813 13924.88536 3580372.81 0.472679168 15929.61177 3.63E-05 4.440144351 6.324312315 VGVEASEETPQTSSSSARPGT(ph)PSDHQSQEASQFER ddPTM_A459_MK2206_30min_R2 3 VGVEASEETPQTSSSSARPGTPSDHQSQEASQFER 35 1 Q6Y7W6;I1E4Y6;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JHW1 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 VGVEASEETPQT(0.141)S(0.141)S(0.141)S(0.141)S(0.141)ARPGT(0.253)PS(0.03)DHQS(0.001)QEAS(0.01)QFER;VGVEASEETPQT(0.142)S(0.142)S(0.142)S(0.142)S(0.142)ARPGT(0.266)PS(0.023)DHQSQEAS(0.001)QFER;VGVEASEETPQT(0.026)S(0.099)S(0.099)S(0.129)S(0.129)ARPGT(0.388)PS(0.129)DHQS(0.002)QEASQFER 89.652 3.61E-09 147139000 35698.4 174126 84322 357248 281926 408601 249004 165469 298757 116432 TRUE FALSE 38431.49695 165479.156 87133.25339 328059.6956 270856.1687 424150.5974 216309.4757 187096.3664 324742.3438 112632.8334 0.341210425 1.469191097 0.773604381 2.912647101 2.404770976 3.76578112 1.920483301 1.661117463 2.883194306 1 16.78126792 -5.753704244 24.9997379 2.43317234 0.922120458 0.448293734 0.760313876 157.9357946 510438.2657 0.204200622 0.345369949 1.76E-06 5.753704244 -1.511051882 VGVNGFGR ddPTM_A459_MK2206_30min_R1 1 VGVNGFGR 8 0 P04406 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 143.02 0.030168 36346000 2669.4 2842.9 2880.3 2365.5 2844 2504.2 2684.5 2690.2 2264.8 2368.3 FALSE TRUE 2442.353512 2657.826693 2684.793261 2547.69122 2730.717458 2645.98564 2505.421903 2666.679865 2500.234065 2661.702884 0.917590587 0.998543718 1.008675039 0.957165894 1.025928729 0.994095042 0.94128534 1.001869849 0.939336272 1 11.37813382 -4.754556174 24.99608625 0.985303737 0.917590471 0.345897331 0.027896191 271.8859358 987255.8256 0.006721316 0.064846156 1.76E-05 4.754556174 -0.067713265 VGVNGFGR ddPTM_A459_MK2206_30min_R2 2 VGVNGFGR 8 0 P04406 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 157.99 0.007215 112981000 151588 189026 181984 188592 152341 204275 179653 156605 141610 167646 FALSE TRUE 163193.6938 179639.2437 188051.2557 173183.4303 146359.3269 212048.8283 156064.3453 177073.8112 153926.9818 162175.7247 1.006276951 1.107682694 1.15955243 1.067875174 0.902473703 1.307525085 0.962316312 1.09186385 0.949137006 1 17.30719836 -8.047437283 1.751446022 0.980033788 1.082433576 0.108858584 0.106575601 0.844406569 4.632506294 0.091117531 0.029473255 8.97E-09 8.047437283 0.102399788 VGVSSKPDSS(ph)PVLSPGNK ddPTM_A459_MK2206_30min_R1 2 VGVSSKPDSSPVLSPGNK 18 1 Q8N4C8;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8-5 Q8N4C8;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 VGVSSKPDS(0.06)S(0.837)PVLS(0.103)PGNK;VGVSSKPDS(0.04)S(0.96)PVLSPGNK 159.64 7.14E-05 218294000 13811.2 15427 16481.9 14756.4 13977.5 12296.9 14711.2 15663.2 14277.8 13277.2 TRUE FALSE 12636.48491 14422.6995 15363.15455 15892.94048 13420.74658 12993.13985 13729.84269 15526.25829 15762.0284 14922.07977 0.846831347 0.966534137 1.029558532 1.065062024 0.899388475 0.870732502 0.920102486 1.040488895 1.056288979 1 13.86516101 -7.770563044 24.96015253 1.036291742 0.94715016 0.285701212 0.064591768 289.2693762 791357.0741 0.038356455 0.018838292 1.70E-08 7.770563044 -0.089141581 VGVSSKPDSS(ph)PVLSPGNK ddPTM_A459_MK2206_30min_R2 2 VGVSSKPDSSPVLSPGNK 18 1 Q8N4C8;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8-5 Q8N4C8;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 VGVSS(0.001)KPDS(0.169)S(0.83)PVLSPGNK;VGVSSKPDS(0.167)S(0.832)PVLS(0.001)PGNK 107.92 0.00085568 298980000 854820 948510 953520 899430 918160 705670 1070280 826520 861310 1009470 TRUE FALSE 920265.6764 901408.3727 985309.8809 825943.6919 882108.425 732524.7663 929750.9504 934549.0019 936225.1869 976531.0766 0.942382376 0.923071876 1.008989785 0.845793556 0.903308093 0.750129498 0.952095609 0.957008972 0.958725441 1 19.89730643 -7.498175776 24.98888452 0.965630838 0.896017253 0.232930523 0.06388 1260.542291 1275135.679 0.028273424 0.018958532 3.18E-08 7.498175776 -0.069613585 VGWEQLLTTIAR ddPTM_A459_MK2206_30min_R1 2 VGWEQLLTTIAR 12 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144;P12814-4;P12814-3;P12814;P12814-2;H9KV75;H7C5W8;H0YJ11;H0YJW3 O43707;P12814-4 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 0 ; 259.35 6.26E-24 58406000 1978.64 2253.7 2609.6 2302 2445.3 2329 2062.31 2284.9 1628.84 1702.13 FALSE TRUE 1810.346278 2106.98372 2432.467623 2479.300439 2347.898523 2460.865967 1924.737063 2264.92336 1798.163747 1913.002715 0.946337537 1.101401323 1.271544261 1.296025573 1.227336744 1.286389166 1.006133994 1.183962439 0.93996926 1 10.90162321 -8.258368875 24.75122838 0.969984615 1.17154081 0.322833826 0.112584236 267.1395285 2153454.257 0.089167154 0.030359488 5.52E-09 8.258368875 0.201556195 VHAPGLNLS(ph)GVGGK ddPTM_A459_MK2206_30min_R1 1 VHAPGLNLSGVGGK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VHAPGLNLS(1)GVGGK 114.27 0.0020036 11107000 8312.6 8789.6 8531.4 9115.2 8370.3 7694.7 9074.9 8697.6 7585.2 6934.5 TRUE FALSE 7605.569719 8217.395442 7952.312338 9817.254283 8036.893227 8130.367264 8469.529979 8621.5578 8373.708684 7793.598213 0.975873982 1.054377608 1.020364679 1.259656197 1.03121729 1.043210984 1.086729101 1.106235857 1.074434229 1 12.92807384 -4.824721513 1.76512393 1.085390939 0.949686261 0.164450249 0.0684293 1.422033144 4.859016003 0.018710888 0.318914874 1.50E-05 4.824721513 -0.135704679 VHAYFAPVT(ph)PPPSVGGSR ddPTM_A459_MK2206_30min_R1 1 VHAYFAPVTPPPSVGGSR 18 0 J3KTA1;Q96IG2-2;Q96IG2 J3KTA1 FBXL20 F-box/LRR-repeat protein 20 1 VHAYFAPVT(0.999)PPPSVGGSR 69.259 0.035199 13989000 1496.3 1205.8 1507.7 1495.6 1671.6 1562.2 1642.3 1484.8 1674.9 1469.5 TRUE FALSE 1369.031828 1127.302201 1405.361525 1610.791371 1605.016632 1650.650414 1532.745164 1471.81855 1849.011849 1651.552754 0.828936178 0.682571113 0.850933475 0.975319358 0.971822806 0.999453641 0.928063097 0.891172593 1.119559665 1 10.68960734 -5.596142046 3.31110334 0.977230146 0.755661994 0.669395288 0.065149662 0.133392187 2.924132146 0.0175916 0.034125046 2.53E-06 5.596142046 -0.221568152 VHAYFAPVT(ph)PPPSVGGSR ddPTM_A459_MK2206_30min_R2 2 VHAYFAPVTPPPSVGGSR 18 0 J3KTA1;Q96IG2-2;Q96IG2 J3KTA1 FBXL20 F-box/LRR-repeat protein 20 1 VHAYFAPVT(1)PPPSVGGSR;VHAYFAPVT(1)PPPSVGGSR 121.21 0.0012697 16954700 40122 40739 36637 35428 35213 47038 53597 34152 45208 40654 TRUE FALSE 43193.77117 38715.9605 37858.45929 32533.41907 33830.36069 48828.06405 46559.64952 38615.78366 49140.11012 39327.46331 1.098310634 0.984450998 0.962646866 0.82724428 0.860222294 1.241576749 1.183896585 0.981903749 1.249511308 1 15.26324951 -6.756794811 24.99993508 1.133529096 0.94294263 0.42591461 0.107220603 117.3973214 631904.5826 0.036862887 0.035702845 1.75E-07 6.756794811 -0.190586466 VHDRS(ph)EEEEEEEEEEEEEQPR ddPTM_A459_MK2206_30min_R1 1 VHDRSEEEEEEEEEEEEEQPR 21 1 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9;V9GYQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 VHDRS(1)EEEEEEEEEEEEEQPR 89.604 0.00043843 6558800 263.78 296.98 408.61 263.53 284.36 288.03 283.38 304.08 248.92 247.43 TRUE FALSE 241.3441258 277.646548 380.8746917 283.8271263 273.0333391 304.3380097 264.4762373 301.4214606 274.7961248 278.0834964 0.867883671 0.998428715 1.36964148 1.020654336 0.981839421 1.094412339 0.951067721 1.083924305 0.988178473 1 8.119374316 -5.93206655 24.99999919 1.019528103 1.091380958 0.046168904 0.123792602 165.6155053 60944.7258 0.035911319 0.053265089 1.17E-06 5.93206655 0.071852855 VHDRS(ph)EEEEEEEEEEEEEQPR ddPTM_A459_MK2206_30min_R2 1 VHDRSEEEEEEEEEEEEEQPR 21 1 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9;V9GYQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 VHDRS(1)EEEEEEEEEEEEEQPR 117.4 4.17E-05 25389000 4329.6 3501.8 3491.3 5509.6 2914.3 4899.4 4678.7 3422.9 3783 4010.5 TRUE FALSE 4661.077505 3327.905704 3607.698199 5059.448056 2799.869939 5085.8501 4064.38107 3870.284783 4112.038502 3879.637713 1.201420815 0.85778775 0.929905952 1.304103225 0.721683349 1.310908512 1.047618713 0.997589226 1.059902704 1 11.92170622 VHDYDMR ddPTM_A459_MK2206_30min_R1 2 VHDYDMR 7 0 J3QR07;Q96MU7;Q96MU7-2 J3QR07 YTHDC1 YTH domain-containing protein 1 0 ; 147.69 0.0040935 6085200 995.17 1033.78 1072.59 940.45 1287.63 1104.47 1020.61 855.68 670.34 831.16 FALSE TRUE 910.5255657 966.4807341 999.7855792 1012.883622 1236.34097 1167.004137 952.5269691 848.19888 740.0242418 934.1303757 0.974730711 1.034631524 1.070284839 1.084306483 1.323520787 1.24929471 1.019693818 0.908009098 0.792206592 1 9.867480109 -7.615081034 3.513998063 0.886997366 1.12453049 0.464869743 0.106479559 0.224840263 5.438434541 0.061354804 0.033039126 2.43E-08 7.615081034 0.237533124 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGS(ph)SPR ddPTM_A459_MK2206_30min_R1 1 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPR 40 2 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 VHEPPREDAAPTKPAPPAPPPPQNLQPES(0.188)DAPQQPGS(0.406)S(0.406)PR 53.571 0.00015342 10420000 799.71 899.45 625.82 642.17 1011.8 667.55 792.4 636.13 563.64 613.92 TRUE FALSE 731.6904651 840.8956415 583.341082 691.6300447 971.4978635 705.3461041 739.5404418 630.5683825 622.232395 689.9770445 1.060456244 1.218729881 0.845449985 1.002395732 1.408014761 1.022274741 1.0718334 0.913897625 0.901816082 1 9.430404554 -7.700834968 4.620348535 0.930315346 1.093604618 0.196114076 0.14027782 0.340598392 14.45076856 0.073913108 0.039882464 1.99E-08 7.700834968 0.163289272 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPR 40 2 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 VHEPPREDAAPTKPAPPAPPPPQNLQPES(0.003)DAPQQPGS(0.325)S(0.672)PR 61.513 1.26E-05 18688000 17188 13804 17628 21352 19091 14216 15820 16936 15969 16772 TRUE FALSE 18503.9265 13118.51343 18215.70872 19607.4733 18341.39142 14756.99984 13742.815 19149.59335 17357.95475 16224.73101 1.140476627 0.808550442 1.122712525 1.208492966 1.13045889 0.909537411 0.847028834 1.180271854 1.069845456 1 13.98590694 -11.6072964 2.538942983 0.929700114 1.042916998 0.009963048 0.134775984 21599613.12 11550344.19 8838866.618 0.034918392 2.47E-12 11.6072964 0.113216885 VHFTAER ddPTM_A459_MK2206_30min_R2 2 VHFTAER 7 0 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 0 ; 138.24 0.0041389 2244400 5521.3 7420.3 3909.9 9383.7 9677.9 9235.5 7029.2 6191.5 6450.1 5587.6 FALSE TRUE 5944.014973 7051.818692 4040.254115 8617.021693 9297.897018 9586.963424 6106.257596 7000.750309 7011.118039 5405.27707 1.099668879 1.304617432 0.747464758 1.594186863 1.720151788 1.773630343 1.129684476 1.295169557 1.297087633 1 12.40015286 -5.778982846 24.99899198 1.431182001 1.07598689 0.263029787 0.264840394 322.8892983 460108.0252 0.077956553 0.115918721 1.66E-06 5.778982846 -0.355195111 VHGS(ph)PLELK ddPTM_A459_MK2206_30min_R2 1 VHGSPLELK 9 0 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 VHGS(1)PLELK 95.477 0.014778 4273900 55506 52390 50796 53609 49832 41957 64362 46008 31556 68510 TRUE FALSE 59755.58204 49788.38878 52489.51329 49228.97321 47875.34529 43553.70304 55911.19209 52021.40357 34300.68384 66274.52431 0.901637283 0.751244755 0.792001358 0.742803871 0.722379312 0.657171115 0.843630228 0.784938166 0.517554584 1 16.01616679 VHHEPQLSDK ddPTM_A459_MK2206_30min_R1 1 VHHEPQLSDK 10 0 O43852-5;O43852;O43852-3;O43852-13;O43852-14;O43852-9;O43852-11;O43852-10;O43852-6;O43852-2;O43852-4;O43852-12;O43852-7;O43852-8 O43852-5 CALU Calumenin 0 78.655 0.029324 1798000 1968.6 1658.3 2100.4 1592.1 1770.8 1624.4 2106.8 1832.6 1034.9 2034.2 FALSE TRUE 1801.160232 1550.344369 1957.8307 1714.723818 1700.265286 1716.372124 1966.259216 1816.577771 1142.481558 2286.212053 0.787836032 0.678127983 0.856364438 0.750028334 0.743704104 0.750749311 0.860051111 0.794579737 0.499726855 1 11.15874351 -10.70592771 4.736149033 1.0000334 0.752856139 0.376706792 0.097429004 3.34E-05 5.76E-06 0.091666238 0.022229327 1.97E-11 10.70592771 -0.247177261 VHIDIGADGR ddPTM_A459_MK2206_30min_R1 2 VHIDIGADGR 10 0 P31942;P31942-4;P31942-3;P31942-2;P31942-5;P31942-6 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 0 ; 147.73 0.0011429 14308500 7896.1 7662.7 8210.8 7023.8 8420 7140 8158.4 7418.3 7112.8 6444.6 FALSE TRUE 7224.495231 7163.856837 7653.473773 7564.774293 8084.61357 7544.26063 7614.168022 7353.442585 7852.201013 7243.005702 0.997444366 0.989072373 1.056670958 1.044424732 1.116195942 1.041592529 1.05124424 1.015247383 1.084108081 1 12.8223728 -5.262009046 24.94130171 1.053469873 0.993258365 0.360099321 0.030767478 46.26610409 2025774.396 0.007774216 0.017941815 5.47E-06 5.262009046 -0.060211509 VHIDIGADGR ddPTM_A459_MK2206_30min_R2 2 VHIDIGADGR 10 0 P31942;P31942-4;P31942-3;P31942-2;P31942-5;P31942-6 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 0 ; 109.79 0.013846 16607600 105376 144540 112435 141325 122983 135782 121613 121243 125261 120140 FALSE TRUE 113443.6676 137362.3538 116183.5268 129778.2954 118154.0695 140949.2792 105645.067 137089.8764 136155.9754 116219.8416 0.976112736 1.181918267 0.999687533 1.116662126 1.016642837 1.212781545 0.909010592 1.179573767 1.171538125 1 16.82649687 -4.715462015 23.64845048 1.087431321 0.976109644 0.10700307 0.096564623 15810.60645 8130926.113 0.022426774 13.87734626 1.93E-05 4.715462015 -0.111321676 VHIEIGPDGR ddPTM_A459_MK2206_30min_R1 4 VHIEIGPDGR 10 0 P52597;P31943;G8JLB6;E9PCY7;H0YB39;H0YBD7;H0YBG7;P55795 P52597;P31943;P55795 HNRNPF;HNRNPH1;HNRNPH2 "Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2" 0 ;;; 166.66 0.00044901 104263000 24956.1 25355.6 25531 21435.4 26168.9 22149 25087 22334 20040.8 19080.4 FALSE TRUE 22833.45265 23704.94583 23798.02685 23086.35822 25126.5373 23403.05724 23413.492 22138.73619 22124.11288 21444.224 1.064783349 1.105423345 1.109763956 1.076576994 1.171715857 1.091345494 1.091832094 1.032386912 1.031704988 1 14.38830149 -7.798245894 1.93490849 1.014364355 1.105666645 0.645194938 0.027552235 0.220230174 1.592242779 0.020448608 0.008067578 1.59E-08 7.798245894 0.091302289 VHIEIGPDGR ddPTM_A459_MK2206_30min_R2 6 VHIEIGPDGR 10 0 P52597;P31943;G8JLB6;E9PCY7;H0YB39;H0YBD7;H0YBG7;P55795 P52597;P31943;P55795 HNRNPF;HNRNPH1;HNRNPH2 "Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2" 0 ;;;;; 153.1 0.00085473 74429200 208986 284065 245699 292592 257937 264522 290230 226369 236887 249006 FALSE TRUE 224986.1288 269958.7452 253890.482 268686.2976 247809.0974 274588.5701 252122.4524 255956.2055 257491.0031 240880.9546 0.934013771 1.120714361 1.05400812 1.115431887 1.028761687 1.139934747 1.046668271 1.062583823 1.068955424 1 17.87796081 -4.749269835 24.99293116 1.073705107 0.934013451 0.495620641 0.041297608 439.0222793 901577.4871 0.009332382 0.156318082 1.78E-05 4.749269835 -0.139691656 VHISGS(ph)VDGLDK ddPTM_A459_MK2206_30min_R1 1 VHISGSVDGLDK 12 0 J3KP75 J3KP75 PHACTR2 Phosphatase and actin regulator 1 VHIS(0.053)GS(0.947)VDGLDK 95.067 0.012157 3511400 4507.4 2226.5 2543.8 2534.8 5978.9 7470.4 7603.3 5366.4 3546.9 3321.2 TRUE FALSE 4124.021961 2081.554445 2371.133943 2730.030735 5740.747752 7893.367592 7096.09773 5319.482131 3915.612948 3732.65533 1.104849389 0.557660502 0.635240528 0.731391059 1.5379796 2.114678934 1.901085716 1.425120098 1.049015406 1 11.86598658 -6.268250955 6.8612101 1.577861513 0.732691583 0.51941533 0.347710556 0.109183203 31.92428885 0.111484256 0.133355761 5.39E-07 6.268250955 -0.84516993 VHISGS(ph)VDGLDK ddPTM_A459_MK2206_30min_R2 1 VHISGSVDGLDK 12 0 J3KP75 J3KP75 PHACTR2 Phosphatase and actin regulator 1 VHIS(0.246)GS(0.754)VDGLDK 85.493 0.020627 3295400 17216 38684 25529 53502 67604 83687 82940 52763 66455 64670 TRUE FALSE 18534.0702 36763.00881 26380.12412 49130.71546 64949.52728 86871.76743 72049.87837 59659.30526 72235.13578 62559.8232 0.29626155 0.587645664 0.421678368 0.785339743 1.038198703 1.388619133 1.151695684 0.953636091 1.154656968 1 15.93294881 -6.036119113 2.188265806 1.132945739 0.442201164 0.847489509 0.129404335 0.11692825 1.116227021 0.042677684 0.064676673 9.20E-07 6.036119113 -0.690744575 down VHNNS(ph)PDTSR ddPTM_A459_MK2206_30min_R2 1 VHNNSPDTSR 10 0 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 VHNNS(0.96)PDT(0.036)S(0.003)R 81.431 0.045116 769660 1076.6 0 441.49 1095.8 2527.3 2032.3 2460.8 11132 4059.7 955.7 TRUE FALSE 1159.025324 0 456.2090562 1006.269635 2428.065503 2109.640601 2137.694004 12586.99062 4412.805368 924.5155873 1.253656877 0 0.493457398 1.088429063 2.626311051 2.281887542 2.312231436 13.6146873 4.77310002 1 9.852553833 -7.551221542 24.9996497 7.3090331 1.334729312 0.362363575 3.018574159 185.3773867 163509.2309 1.333154675 0.76971327 2.81E-08 7.551221542 -5.974303788 VHNNSPDT(ph)SRR ddPTM_A459_MK2206_30min_R2 2 VHNNSPDTSRR 11 1 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 VHNNS(0.183)PDT(0.633)S(0.183)RR;VHNNS(0.037)PDT(0.807)S(0.157)RR 88.075 0.038885 15954900 9485.1 6286.4 6672.3 8078 12640.1 8390.3 6913.8 19170 14810.8 11202.6 TRUE FALSE 10211.28655 5974.226517 6894.751152 7418.00156 12143.78616 8709.598746 6006.009755 21675.58482 16099.01661 10837.06008 0.942256154 0.55127742 0.636219704 0.684503131 1.120579389 0.803686487 0.554210248 2.000135153 1.485552031 1 13.40368581 -7.750667693 24.99999101 1.557132751 0.756710089 0.591688996 0.279955074 125.5350272 291355.6716 0.129783785 0.073967996 1.78E-08 7.750667693 -0.800422663 VHPAVVIR ddPTM_A459_MK2206_30min_R1 2 VHPAVVIR 8 0 C9JD32;J3KT29;P62829;J3QQT9;J3KTJ3 C9JD32 RPL23 60S ribosomal protein L23 0 ; 98.418 0.027364 9531400 5408.6 5626.7 5422.9 5263.1 5583.5 5505.8 5556.6 5200.3 5308.5 4486 FALSE TRUE 4948.570168 5260.400807 5054.808657 5668.464874 5361.097372 5817.533638 5185.929353 5154.834325 5860.337572 5041.759548 0.981516497 1.043366063 1.002588205 1.124302899 1.063338567 1.153869712 1.028595137 1.022427642 1.162359592 1 12.2997116 -5.742430255 24.91620031 1.080537991 1.012577804 0.262609899 0.053718958 325.523853 426676.6745 0.014069674 0.0243176 1.81E-06 5.742430255 -0.067960187 VHPAVVIR ddPTM_A459_MK2206_30min_R2 2 VHPAVVIR 8 0 C9JD32;J3KT29;P62829;J3QQT9;J3KTJ3 C9JD32 RPL23 60S ribosomal protein L23 0 ; 153.15 0.0012652 12629000 63507 68818 58008 75210 59789 69430 81677 61556 56486 61680 FALSE TRUE 68369.14475 65400.59819 59941.95777 69065.10242 57441.38344 72072.2073 70952.71179 69601.58055 61399.05018 59667.38665 1.145837761 1.096086185 1.004601695 1.157501716 0.962693134 1.207899513 1.189137245 1.166492861 1.029021944 1 15.86465497 VHS(ph)EAISPAPEEK ddPTM_A459_MK2206_30min_R1 1 VHSEAISPAPEEK 13 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 VHS(0.967)EAIS(0.033)PAPEEK 197.38 0.00017116 9189200 7586.9 8094.6 8003.6 7274.6 6437.4 6131.7 6297.4 6692.2 6721 5543.3 TRUE FALSE 6941.594315 7567.640069 7460.337931 7834.890952 6180.984727 6478.871555 5877.311936 6633.690801 7419.672001 6230.045854 1.114212395 1.214700541 1.197477211 1.257597638 0.992125078 1.039939626 0.94338181 1.064790044 1.190949822 1 12.60502707 -6.264742822 24.99929887 1.037083529 1.197438652 0.556178052 0.06889906 224.6443011 1700028.689 0.021739742 0.025639179 5.44E-07 6.264742822 0.160355123 VHS(ph)PCPTSGSEK ddPTM_A459_MK2206_30min_R1 2 VHSPCPTSGSEK 12 0 X6RLP6;Q96LT9-2;Q96LT9 X6RLP6 RNPC3 RNA-binding protein 40 1 VHS(0.969)PCPT(0.024)S(0.007)GSEK;VHS(0.995)PCPT(0.002)S(0.003)GSEK 133.15 0.0017828 7019900 2783.8 2716.3 2989.2 2317.22 2284.43 2545.8 3079.2 2515.09 2224.68 4097.9 TRUE FALSE 2547.023192 2539.468376 2786.301432 2495.692686 2193.436316 2689.940996 2873.792186 2493.100833 2455.943447 4605.57879 0.55302999 0.551389628 0.60498399 0.541884701 0.476256387 0.584061443 0.62398068 0.541321937 0.533254029 1 12.16916676 -11.00020744 3.041298688 1.011379105 0.557481385 0.921193405 0.038898493 15822247.32 18692477.57 1517478.104 0.010471275 1.00E-11 11.00020744 -0.45389772 VHS(ph)PCPTSGSEK ddPTM_A459_MK2206_30min_R2 4 VHSPCPTSGSEK 12 0 X6RLP6;Q96LT9-2;Q96LT9 X6RLP6 RNPC3 RNA-binding protein 40 1 VHS(1)PCPTSGSEK;VHS(0.92)PCPT(0.075)S(0.005)GSEK;VHS(1)PCPTSGSEK;VHS(1)PCPTSGSEK 105.58 0.0061264 49383200 442514 362437 379196 386830 335891.9 279812.4 431205 341738 238919.6 437693 TRUE FALSE 476393.2121 344438.9056 391838.2054 355224.7516 322703.0963 290460.857 374587.2655 386404.33 259700.3949 423411.1133 1.125131573 0.813485747 0.925432028 0.838959443 0.762150747 0.686001968 0.884689263 0.91259846 0.613352807 1 18.69169961 -2.350415312 1.296325364 0.814727128 200 0.382634824 0.111311949 986.1475525 3.377957255 0.031242006 582209.1952 0.004462566 2.350415312 199.1852729 VHS(ph)PPASLVPR ddPTM_A459_MK2206_30min_R1 1 VHSPPASLVPR 11 0 Q9BTE3;Q9BTE3-2;Q9BTE3-3 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 1 VHS(1)PPASLVPR 86.262 0.0223 7157200 1361.2 1253.5 1450.7 1411.1 1272.8 1374 1769 1589.8 1403.6 1313.1 TRUE FALSE 1245.422792 1171.896922 1352.230526 1519.783167 1222.101681 1451.794693 1650.993238 1575.900546 1549.509243 1475.776741 0.843910029 0.794088218 0.916283939 1.029819162 0.828107427 0.983749541 1.118728322 1.067844818 1.049961826 1 10.52725877 -6.012233636 0.559951665 1.06558062 0.790015547 0.56845376 0.069572278 0.973608482 0.557877985 0.0526295 0.149717681 9.72E-07 6.012233636 -0.275565072 VHS(ph)PPASLVPR ddPTM_A459_MK2206_30min_R2 3 VHSPPASLVPR 11 0 Q9BTE3;Q9BTE3-2;Q9BTE3-3 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 1 VHS(1)PPASLVPR;VHS(1)PPASLVPR;VHS(1)PPASLVPR 156 0.00035827 22257000 45516 67070 52048 65382 67301 68383 65670 49760 61631 60258 TRUE FALSE 49000.73996 63739.40133 53783.25434 60040.08145 64658.42458 70985.36298 57047.45012 56263.80285 66991.55298 58291.78639 0.840611396 1.093454246 0.922655792 1.029992134 1.109220159 1.217759265 0.978653317 0.965209789 1.149245153 1 15.83100499 -4.754223604 24.85115103 1.050689378 0.840611 0.349265044 0.0864677 288.0188891 991845.9867 0.022221792 0.221334086 1.76E-05 4.754223604 -0.210078379 VHSAVITVPAYFNDSQR ddPTM_A459_MK2206_30min_R1 1 VHSAVITVPAYFNDSQR 17 0 P54652 P54652 HSPA2 Heat shock-related 70 kDa protein 2 0 101.01 0.0058409 65890000 2597.3 2811.8 2837.4 2217.6 2430.9 2493.1 3022.3 2772.6 2464.7 1961.4 FALSE TRUE 2376.385996 2628.751309 2644.805193 2388.399936 2334.072105 2634.257168 2820.687881 2748.359451 2720.914385 2204.39304 1.078022818 1.19250572 1.199788398 1.083472817 1.058827561 1.195003395 1.279575752 1.246764711 1.234314542 1 11.10616576 -6.976943035 23.12362111 1.214522068 1.128372407 0.116214777 0.083835491 163.5289487 163999.916 0.028917375 0.025500236 1.05E-07 6.976943035 -0.086149662 VHSEAIS(ph)PAPEEK ddPTM_A459_MK2206_30min_R1 1 VHSEAISPAPEEK 13 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 VHS(0.044)EAIS(0.956)PAPEEK 155.14 0.00036571 7791500 3589.9 4283.6 4158.7 3730.4 3534.8 3067.2 3644.1 3606.5 3351.6 3578.2 TRUE FALSE 3284.560154 4004.736861 3876.419031 4017.716054 3394.001431 3240.862213 3401.008738 3574.968751 3700.010814 4021.49443 0.816751138 0.995833 0.963925003 0.999060455 0.84396522 0.805885043 0.845707683 0.888965237 0.920058669 1 11.97351601 -4.703156703 22.6903558 0.9105534 0.816743572 0.159269526 0.06790151 20079.72413 7814648.206 0.018578642 32.6908203 1.98E-05 4.703156703 -0.093809828 VHVGDEDFVHLR ddPTM_A459_MK2206_30min_R1 4 VHVGDEDFVHLR 12 0 P04080 P04080 CSTB Cystatin-B 0 ;;; 221.59 1.43E-08 101574600 10122.6 9781.2 10308.5 7827.1 11039.7 8417.2 11428 9191.7 8866.6 8786.4 FALSE TRUE 9261.619714 9144.442102 9608.787741 8429.944598 10599.96537 8893.77459 10665.65897 9111.337936 9788.314799 9874.925566 0.93789261 0.926026433 0.973049131 0.85367171 1.073422306 0.90064219 1.080074872 0.922674088 0.991229223 1 13.26955416 -6.255832305 24.99545295 0.990375959 0.926499665 0.258187722 0.059390594 708.265316 3157337.556 0.016515561 0.020718274 5.55E-07 6.255832305 -0.063876294 VHVGDEDFVHLR ddPTM_A459_MK2206_30min_R2 5 VHVGDEDFVHLR 12 0 P04080 P04080 CSTB Cystatin-B 0 ;;;; 189.57 5.89E-05 55576200 94549.2 125264.2 96682 130686 117546.2 126278.8 119152.9 87084.4 105364.9 109017.8 FALSE TRUE 101787.9594 119043.762 99905.32963 120008.5358 112930.7456 131084.4282 103507.9811 98466.63009 114529.3485 105460.5581 0.965175619 1.1287989 0.947324113 1.137947095 1.070833946 1.242971122 0.981485239 0.93368205 1.085992248 1 16.68634401 VHVQFFDDS(ph)PTR ddPTM_A459_MK2206_30min_R1 3 VHVQFFDDSPTR 12 0 P52701-2;P52701;A0A087WWJ1;F8WAX8;A0A494C0M1;C9J7Y7;C9JH55;C9J8Y8 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 VHVQFFDDS(0.939)PT(0.061)R;VHVQFFDDS(0.822)PT(0.178)R;VHVQFFDDS(0.808)PT(0.192)R 149.6 0.00037811 29442000 9276.78 9118.58 10219 7594.68 9959.5 8624.04 10452.3 8524.68 7578.88 7573.78 TRUE FALSE 8487.741147 8524.958785 9525.362752 8179.62357 9562.792025 9112.325692 9755.046138 8450.149622 8366.731697 8512.077046 0.997141015 1.001513349 1.119040946 0.960943319 1.123438143 1.070517295 1.146024183 0.992724758 0.982924808 1 13.05529549 -5.048065498 24.94222481 1.053368091 0.998233816 0.092903968 0.061752359 738.3252561 383132.5945 0.015641763 0.041386072 8.95E-06 5.048065498 -0.055134274 VHVQFFDDS(ph)PTR ddPTM_A459_MK2206_30min_R2 6 VHVQFFDDSPTR 12 0 P52701-2;P52701;A0A087WWJ1;F8WAX8;A0A494C0M1;C9J7Y7;C9JH55;C9J8Y8 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 VHVQFFDDS(0.909)PT(0.091)R;VHVQFFDDS(0.924)PT(0.076)R;VHVQFFDDS(0.953)PT(0.047)R;VHVQFFDDS(0.882)PT(0.118)R;VHVQFFDDS(0.768)PT(0.232)R;VHVQFFDDS(0.854)PT(0.146)R 158.91 0.00030327 67456800 155257.3 190320.5 165564.3 192699 195576 195815.6 186498 143694.2 152161.9 188511.9 TRUE FALSE 167143.9183 180869.4607 171084.1311 176954.8753 187896.7035 203267.4999 162010.5886 162475.5253 165396.667 182360.7721 0.91655632 0.991822192 0.938163011 0.970356032 1.03035703 1.114644874 0.888407011 0.890956555 0.906975031 1 17.4764359 VHVQFFDDSPT(ph)R ddPTM_A459_MK2206_30min_R1 3 VHVQFFDDSPTR 12 0 P52701-2;P52701;A0A087WWJ1;F8WAX8;A0A494C0M1;C9J7Y7;C9JH55;C9J8Y8 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 VHVQFFDDS(0.085)PT(0.915)R;VHVQFFDDS(0.095)PT(0.905)R;VHVQFFDDS(0.325)PT(0.675)R 179.79 0.00014088 83590300 8347.92 7705.08 8324.53 7724.6 8188.64 8077.2 8648.1 8127.32 6460.35 6347.7 TRUE FALSE 7637.885567 7203.477892 7759.484097 8319.55003 7862.469129 8534.524084 8071.201028 8056.263698 7131.926501 7134.100999 1.070616405 1.009724686 1.087661094 1.166166561 1.102096695 1.196299868 1.131355027 1.129261234 0.999695197 1 12.80051593 -5.513506954 23.62808444 1.114902472 1.042301104 0.12258528 0.061832568 333.1104572 839831.1507 0.016147984 0.030155994 3.07E-06 5.513506954 -0.072601368 VIAHTQMR ddPTM_A459_MK2206_30min_R1 4 VIAHTQMR 8 0 H7C422;H7C3M2;P39023;B5MCW2;G5E9G0 H7C422;P39023 RPL3 60S ribosomal protein L3 0 ;;; 171.38 0.00022805 48180800 17418.1 17609.3 16790.9 15419.8 16699.5 16142.2 19070.4 18048.5 6917.3 14033.9 FALSE TRUE 15936.59913 16462.93137 15651.18049 16607.43567 16034.32355 17056.15741 17798.24841 17890.70387 7636.378089 15772.52548 1.010402497 1.043772691 0.992306559 1.052934464 1.016598361 1.081384046 1.128433644 1.134295449 0.484156966 1 13.94512606 -8.238789723 24.99773366 0.742078373 1.056527107 0.510074285 0.123654786 500.6797714 552586.8167 0.076844591 0.029000637 5.77E-09 8.238789723 0.314448733 VIAHTQMR ddPTM_A459_MK2206_30min_R2 2 VIAHTQMR 8 0 H7C422;H7C3M2;P39023;B5MCW2;G5E9G0 H7C422;P39023 RPL3 60S ribosomal protein L3 0 ; 171.38 0.00022805 14618400 66296 80777 59402 76057 79798 91154 75083 64289 76029 82681 FALSE TRUE 71371.67273 76765.73164 61382.43303 69842.89981 76664.72957 94622.92934 65224.51191 72691.79304 82641.86499 79983.12574 0.892334128 0.959774089 0.767442288 0.873220434 0.958511297 1.183036153 0.815478406 0.908839113 1.033241252 1 16.28740804 -6.302161942 5.292509916 0.981131336 0.871593319 0.233925335 0.097884847 0.330494901 23.90279718 0.031633963 0.036738329 4.99E-07 6.302161942 -0.109538018 VIAIDSDAES(ph)PAK ddPTM_A459_MK2206_30min_R2 3 VIAIDSDAESPAK 13 0 P28749 P28749 RBL1 Retinoblastoma-like protein 1 1 VIAIDS(0.017)DAES(0.983)PAK;VIAIDSDAES(1)PAK;VIAIDSDAES(1)PAK 175.01 0.00010861 8602600 82040 67862 68983 69925 64237 61196 78587 61009 54459 87025 TRUE FALSE 88321.04548 64492.07176 71282.85879 64211.90382 61714.73261 63524.85666 68268.4325 68983.08578 59195.74538 84185.38138 1.04912568 0.766072098 0.84673678 0.76274411 0.733081345 0.754582988 0.810929776 0.819418819 0.703159437 1 16.36128211 -4.758038328 24.93507734 0.791177174 1.049126053 0.472664427 0.078601333 74.64960846 547210.3322 0.017974977 0.126674953 1.75E-05 4.758038328 0.257948879 VIAIDSDAES(ph)PAKR ddPTM_A459_MK2206_30min_R1 5 VIAIDSDAESPAKR 14 1 P28749 P28749 RBL1 Retinoblastoma-like protein 1 1 VIAIDS(0.005)DAES(0.995)PAKR;VIAIDSDAES(1)PAKR;VIAIDS(0.002)DAES(0.998)PAKR;VIAIDSDAES(1)PAKR;VIAIDS(0.063)DAES(0.937)PAKR 164.7 0.00046442 82028500 19149.3 20856.7 21546.6 19217.7 18395.3 16502.4 18362.5 18584.1 17405.5 15396.6 TRUE FALSE 17520.55148 19498.92504 20084.07682 20697.85058 17662.57625 17436.75163 17137.57113 18421.62117 19214.86401 17304.04705 1.01251178 1.126841888 1.16065778 1.196127734 1.020719384 1.007668991 0.990379365 1.064584552 1.110426015 1 14.07882187 -6.2864685 24.63593448 1.032198381 1.126851236 0.404384241 0.054500534 671.1748665 660629.394 0.017907823 0.020314212 5.17E-07 6.2864685 0.094652854 VIAIDSDAES(ph)PAKR ddPTM_A459_MK2206_30min_R2 3 VIAIDSDAESPAKR 14 1 P28749 P28749 RBL1 Retinoblastoma-like protein 1 1 VIAIDS(0.002)DAES(0.998)PAKR;VIAIDS(0.001)DAES(0.999)PAKR;VIAIDS(0.001)DAES(0.999)PAKR 85.988 0.012271 100085000 344725 408861 386908 295722 363521 245671 339102 305573 268292 400980 TRUE FALSE 371117.411 388557.5573 399807.3196 271560.5666 349247.339 255020.1821 294577.5001 345512.4403 291627.5532 387896.0554 0.956744483 1.001705359 1.030707361 0.700085919 0.900363214 0.657444639 0.759423809 0.890734606 0.751818816 1 18.56531058 -5.749438676 24.99986341 0.799482467 0.996917751 0.435160772 0.097683518 191.827464 399611.415 0.025189611 0.043202622 1.78E-06 5.749438676 0.197435284 VIDGPHSGR ddPTM_A459_MK2206_30min_R2 2 VIDGPHSGR 9 0 O00267-2;O00267 O00267-2 SUPT5H Transcription elongation factor SPT5 0 ; 140.11 0.0032617 2362800 11010 14969.3 12021.1 13801 15321 15880.4 15166.7 11527 13475.4 15318.5 FALSE TRUE 11852.93407 14225.94633 12421.87747 12673.41415 14719.42056 16484.73975 13175.29407 13033.61848 14647.46593 14818.6586 0.79986552 0.960002299 0.838259239 0.85523356 0.99330317 1.112431307 0.889101668 0.879541046 0.988447492 1 13.85512724 -6.259242906 24.90347258 0.973477405 0.868453096 0.378431314 0.071234853 234.8256256 2662435.561 0.022643499 0.027831361 5.50E-07 6.259242906 -0.105024309 VIEEEWQQVDR ddPTM_A459_MK2206_30min_R2 1 VIEEEWQQVDR 11 0 P42166 P42166 TMPO "Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin" 0 129.89 0.034612 3533800 5892 8058 5529.7 5036.3 6575.9 8132.1 5898.7 5632.2 7693.4 6900.3 FALSE TRUE 6343.09605 7657.851437 5714.057438 4624.81818 6317.697125 8441.572764 5124.193604 6368.347878 8362.558026 6675.143776 0.950256094 1.147218951 0.856020129 0.692841733 0.946451093 1.264627856 0.767652919 0.954039058 1.252790697 1 12.7045832 -6.53918057 24.98151739 1.036116793 0.911346355 0.127729231 0.1694798 594.5886271 911163.4135 0.05838618 0.058400144 2.89E-07 6.53918057 -0.124770438 VIET(ph)PENDFK ddPTM_A459_MK2206_30min_R1 2 VIETPENDFK 10 0 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 VIET(1)PENDFK;VIET(1)PENDFK 178.95 0.00023999 11363200 7521.8 6987.7 6864.3 5624 5908.3 4894.7 6291.3 6022.1 5507.9 6293 TRUE FALSE 6882.031411 6532.79946 6398.370441 6057.161454 5672.9599 5171.833684 5871.618856 5969.449415 6080.465915 7072.62435 0.97305202 0.923674033 0.904667083 0.856423465 0.802101118 0.731246766 0.830189554 0.84402184 0.859718488 1 12.78802992 -5.556446865 1.730918139 0.830713038 0.954694808 0.283723329 0.064427962 0.434059083 2.534101686 0.019310874 0.052939521 2.78E-06 5.556446865 0.123981771 VIET(ph)PENDFK ddPTM_A459_MK2206_30min_R2 2 VIETPENDFK 10 0 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 VIET(1)PENDFK;VIET(1)PENDFK 128.57 0.0072408 15554900 107232 111496 96604 101356 108402 86560 124635 83474 97826 114279 TRUE FALSE 115441.7644 105959.2708 99824.72914 93074.89058 104145.5928 89854.10146 108270.2748 94384.33841 106334.7287 110550.0856 1.04424853 0.958472987 0.902981925 0.841925088 0.942067048 0.812790881 0.979377575 0.853769926 0.961869257 1 16.75434062 -4.870545367 2.388136499 0.904333051 1.062304433 0.316859516 0.058676384 0.473595616 3.901687684 0.014233567 0.145570784 1.35E-05 4.870545367 0.157971383 VIGSGCNLDS(ph)AR ddPTM_A459_MK2206_30min_R1 1 VIGSGCNLDSAR 12 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;F5H5G7;F5H155;A0A087WUM2;G3XAP5;F5H245;Q6ZMR3;P07864;P00338;P00338-3;P00338-5;P00338-4;P00338-2 A0A5F9ZHM4;P00338 LDHB;LDHC;LDHAL6A;LDHA L-lactate dehydrogenase B chain;L-lactate dehydrogenase;L-lactate dehydrogenase A-like 6A;L-lactate dehydrogenase C chain;L-lactate dehydrogenase A chain 1 VIGSGCNLDS(1)AR 81.128 0.038828 13056000 2481.9 1279.2 1552.7 2593.2 1867.4 2875.2 2072.3 1579.2 1448.6 1348.3 TRUE FALSE 2270.801372 1195.923847 1447.30705 2792.928713 1793.017504 3037.991339 1934.060648 1565.393221 1599.187154 1515.337583 1.498544877 0.78921282 0.955105361 1.843106608 1.183246244 2.004828081 1.276323289 1.033032664 1.055333921 1 10.56542351 -7.695329047 4.904165166 1.032069372 1.366615397 0.168141015 0.345297127 0.408823142 18.81629421 0.182177192 0.09967585 2.02E-08 7.695329047 0.334546025 VIGSGCNLDS(ph)AR ddPTM_A459_MK2206_30min_R2 4 VIGSGCNLDSAR 12 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;F5H5G7;F5H155;A0A087WUM2;G3XAP5;F5H245;Q6ZMR3;P07864;P00338;P00338-3;P00338-5;P00338-4;P00338-2 A0A5F9ZHM4;P00338 LDHB;LDHC;LDHAL6A;LDHA L-lactate dehydrogenase B chain;L-lactate dehydrogenase;L-lactate dehydrogenase A-like 6A;L-lactate dehydrogenase C chain;L-lactate dehydrogenase A chain 1 VIGSGCNLDS(1)AR;VIGSGCNLDS(1)AR;VIGSGCNLDS(1)AR;VIGSGCNLDS(1)AR 132.51 0.0018735 40843600 68732 71933 64788 83624 79652 66296 76771 59629 58631 78791 TRUE FALSE 73994.17477 68360.91182 66947.99958 76791.6517 76524.46226 68818.94074 66690.87548 67422.71504 63730.6184 76220.05612 0.970796645 0.896888763 0.878351486 1.00749928 1.00399378 0.902898059 0.874978042 0.884579709 0.836139746 1 16.21788305 -6.979077304 24.86757734 0.889253439 0.94811108 0.173387754 0.054741293 369.7472276 439459.8908 0.019726661 0.017395425 1.05E-07 6.979077304 0.05885764 VIGSGCNLDSAR ddPTM_A459_MK2206_30min_R1 2 VIGSGCNLDSAR 12 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;F5H5G7;F5H155;A0A087WUM2;G3XAP5;F5H245;Q6ZMR3;P07864;P00338;P00338-3;P00338-5;P00338-4;P00338-2 A0A5F9ZHM4;P00338 LDHB;LDHC;LDHAL6A;LDHA L-lactate dehydrogenase B chain;L-lactate dehydrogenase;L-lactate dehydrogenase A-like 6A;L-lactate dehydrogenase C chain;L-lactate dehydrogenase A chain 0 ; 201.09 0.0011733 42589000 1838.16 1867.52 1984.16 1760.57 1584.02 1373.07 1712.77 1372.44 1532.11 1475.05 FALSE TRUE 1681.814839 1745.944109 1849.480747 1896.169406 1520.925129 1450.812037 1598.514238 1360.440902 1691.378317 1657.79033 1.014491887 1.053175469 1.115630073 1.14379326 0.917441188 0.875148087 0.964243915 0.820635081 1.020260697 1 10.69504584 -6.274342234 24.89208722 0.922660689 1.0821484 0.566000928 0.063457198 492.883017 950863.8696 0.019163308 0.021866912 5.32E-07 6.274342234 0.15948771 VIGSGCNLDSAR ddPTM_A459_MK2206_30min_R2 4 VIGSGCNLDSAR 12 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;F5H5G7;F5H155;A0A087WUM2;G3XAP5;F5H245;Q6ZMR3;P07864;P00338;P00338-3;P00338-5;P00338-4;P00338-2 A0A5F9ZHM4;P00338 LDHB;LDHC;LDHAL6A;LDHA L-lactate dehydrogenase B chain;L-lactate dehydrogenase;L-lactate dehydrogenase A-like 6A;L-lactate dehydrogenase C chain;L-lactate dehydrogenase A chain 0 ;;; 201.09 0.0011733 80272000 78419 79847 67681 83024 83832 109416 103887 57875.3 75793 68715 FALSE TRUE 84422.81893 75881.91409 69937.45076 76240.67362 80540.33446 113579.9026 90246.51211 65439.80043 82385.33814 66472.83518 1.270034875 1.14154773 1.052120773 1.146944815 1.211627791 1.708666439 1.357644997 0.984459295 1.239383545 1 16.02047727 -7.75986799 24.99990077 1.083941067 1.266410376 0.197437745 0.179948979 82.88989601 1318803.844 0.100124892 0.05385461 1.74E-08 7.75986799 0.18246931 VIHDNFGIVEGLMT(ph)TVHAITATQK ddPTM_A459_MK2206_30min_R1 1 VIHDNFGIVEGLMTTVHAITATQK 24 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 VIHDNFGIVEGLMT(0.366)T(0.366)VHAIT(0.168)AT(0.099)QK 68.676 0.017002 2403400 608.4 686.86 978.62 672.91 885.05 534.94 847.68 694.08 549.11 522.62 TRUE FALSE 556.6523852 642.1452892 912.194001 724.7376448 849.7965844 565.2278405 791.1328139 688.0117317 606.1919495 587.3661112 0.947709401 1.093262408 1.553024568 1.233877187 1.446791989 0.962309248 1.346916001 1.171350745 1.032051284 1 9.19811622 -8.207982674 3.22520775 1.005926918 1.233666027 0.168387163 0.183365151 0.446676062 8.705896907 0.158937238 0.04852376 6.19E-09 8.207982674 0.227739109 VIHDNFGIVEGLMTTVHAITAT(ph)QK ddPTM_A459_MK2206_30min_R1 1 VIHDNFGIVEGLMTTVHAITATQK 24 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 VIHDNFGIVEGLMT(0.014)T(0.044)VHAIT(0.099)AT(0.843)QK 87.893 0.00070471 4857300 1191.7 1088.8 939.11 1143.4 895.28 1080 783.78 727.31 791.42 408.73 TRUE FALSE 1090.339657 1017.918922 875.3658297 1231.464866 859.6191018 1141.148667 731.4954663 720.9512053 873.6909411 459.3665582 2.373572124 2.215918647 1.905593287 2.680789109 1.871314066 2.484178803 1.592400346 1.569446431 1.901947205 1 8.843502022 -8.380611272 0.423636579 0.967707538 2.323680134 0.621671872 0.292037977 0.757149647 0.369922097 0.38434186 0.219107125 4.16E-09 8.380611272 1.355972596 VIHDNFGIVEGLMTTVHAITATQK ddPTM_A459_MK2206_30min_R1 4 VIHDNFGIVEGLMTTVHAITATQK 24 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;; 193.76 4.31E-27 58210700 14055.95 12753.54 14223.19 12826.81 14505.97 13329.73 13283.71 14234.17 11592.6 9771.55 FALSE TRUE 12860.41764 11923.28223 13257.75949 13814.73313 13928.1665 14084.44779 12397.57794 14109.72215 12797.69225 10982.12339 1.171031975 1.085699169 1.207212761 1.257929149 1.26825806 1.282488577 1.128887148 1.284789986 1.165320385 1 13.4228694 -8.549000444 21.52688386 0.999999997 1.210608621 0.499004415 0.06331738 991.444726 817049.3992 0.064724144 0.016711702 2.82E-09 8.549000444 0.210608624 VIISAPSADAPMFVMGVNHEK ddPTM_A459_MK2206_30min_R1 3 VIISAPSADAPMFVMGVNHEK 21 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;; 244.18 2.19E-31 126274000 18436.6 16957.1 17780.3 16318 16626.7 17875 18989.9 17985.3 16004 15947.9 FALSE TRUE 16868.47036 15853.18971 16573.42277 17574.81519 15964.42333 18887.06705 17723.11842 17828.05642 17667.67307 17923.64625 0.941129395 0.884484635 0.924668036 0.980537941 0.890690605 1.053751384 0.988812107 0.994666831 0.985718688 1 14.12957654 -6.754242676 24.99999448 1.003270375 0.92523458 0.633505137 0.030521203 113.5538533 394464.4234 0.010193584 0.009992271 1.76E-07 6.754242676 -0.078035795 VIISAPSADAPMFVMGVNHEK ddPTM_A459_MK2206_30min_R2 1 VIISAPSADAPMFVMGVNHEK 21 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 105.52 0.0029246 7041200 29265 37691 31897 45372 36901 37134 43871 43386 36583 40588 FALSE TRUE 31505.5509 35819.31975 32960.43006 41664.96246 35452.08133 38547.16039 38110.685 49056.69917 39764.92321 39263.61688 0.802410817 0.91227764 0.839464947 1.061159561 0.902924492 0.981752662 0.970636126 1.249418751 1.012767706 1 15.26090546 -5.969797338 0.508451288 1.081464441 0.795913868 0.42894914 0.090081691 1.459507861 0.647666436 0.069805205 0.219874232 1.07E-06 5.969797338 -0.285550573 VILAS(ph)PETSSAK ddPTM_A459_MK2206_30min_R1 1 VILASPETSSAK 12 0 P49116;P49116-2;C9JKS0 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 VILAS(0.807)PET(0.156)S(0.03)S(0.006)AK 149.23 0.00058177 4370200 3426.2 3085.1 3262.8 2583.2 3008.1 2874.2 2992.5 2956.1 2751.7 2525 TRUE FALSE 3134.783698 2884.259429 3041.330227 2782.158512 2888.281007 3036.93472 2792.875785 2930.255129 3037.749062 2837.816063 1.104646541 1.016365883 1.071715065 0.980387189 1.017783022 1.070166161 0.984163781 1.032574016 1.070453121 1 11.47056537 VILAS(ph)PETSSAK ddPTM_A459_MK2206_30min_R2 2 VILASPETSSAK 12 0 P49116;P49116-2;C9JKS0 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 VILAS(0.689)PET(0.197)S(0.057)S(0.057)AK;VILAS(0.892)PET(0.066)S(0.02)S(0.022)AK 86.262 0.030129 14117300 198002 186480 196580 176179 184217 137066 209957 157634 134354 200523 TRUE FALSE 213161.1854 177219.6744 203133.8791 161784.6121 176983.715 142282.1427 182389.3937 178237.305 146039.8681 193979.9509 1.098882561 0.913597893 1.047190074 0.834027493 0.912381481 0.73348891 0.940248685 0.918843954 0.75286063 1 17.56554802 -5.762918563 24.99999859 0.865854846 1.009260961 0.372420069 0.088558143 40.99355259 692862.4298 0.02337994 0.036898457 1.73E-06 5.762918563 0.143406115 VILHLK ddPTM_A459_MK2206_30min_R1 1 VILHLK 6 0 P07900;P07900-2;G3V2J8;Q14568;P08238;Q58FF7;Q58FF6 P07900;P08238;Q58FF6 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 0 100.78 0.04409 16220000 12188 11875 10996 10557 10485 10991 12760 10591 11601 12156 FALSE TRUE 11151.3466 11101.93534 10249.62216 11370.10197 10067.36025 11613.30092 11908.80368 10498.404 12806.96546 13661.97705 0.816232274 0.812615575 0.750229789 0.832244259 0.736888974 0.850045413 0.871674988 0.768439587 0.937416701 1 13.73787865 -8.426026385 3.844037547 0.998529423 0.805858652 0.727078607 0.040909773 0.108139608 2.764506073 0.039204195 0.010329352 3.75E-09 8.426026385 -0.192670771 VILHLKEDQTEYLEER ddPTM_A459_MK2206_30min_R1 2 VILHLKEDQTEYLEER 16 1 P07900;P07900-2;G3V2J8;P08238;Q58FF7;Q58FF6 P07900;P08238;Q58FF6 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 0 ; 148.52 0.00022772 26729000 9446.2 9208.3 10563.1 11288.3 11955.2 8838.2 7547.1 10795.8 7093.3 4984.6 FALSE TRUE 8642.751086 8608.837996 9846.106202 12157.72682 11478.99907 9338.611246 7043.646729 10701.41346 7830.673919 5602.12988 1.542761641 1.536708034 1.757564786 2.170197243 2.049041938 1.666975141 1.257315857 1.910240157 1.397802994 1 12.45175972 -8.85632047 0.662265144 0.988503166 1.777543421 0.447764557 0.25414386 1.307992614 1.113928741 0.303433118 0.110212154 1.39E-09 8.85632047 0.789040255 VINAAHSFYNGTTTLPISDEDRT(ph)PR ddPTM_A459_MK2206_30min_R1 1 VINAAHSFYNGTTTLPISDEDRTPR 25 1 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 VINAAHSFY(0.001)NGT(0.013)T(0.013)T(0.004)LPIS(0.207)DEDRT(0.763)PR 55.984 0.01706 24579000 1520 1147.2 1206.4 1333.8 1419 1250 1857.5 1360.1 1283.4 1240.7 TRUE FALSE 1390.716018 1072.517071 1124.512929 1436.529507 1362.478225 1320.77392 1733.589564 1348.208789 1416.814023 1394.407283 0.997352807 0.769156246 0.806445106 1.030207978 0.977102058 0.947193791 1.243244772 0.966868723 1.016069007 1 10.44543629 -5.769387877 24.99846583 1.028186207 0.848801868 0.395542682 0.095041923 164.5796475 517613.172 0.026823435 0.040602245 1.70E-06 5.769387877 -0.179384339 VINAAHSFYNGTTTLPISDEDRT(ph)PR ddPTM_A459_MK2206_30min_R2 1 VINAAHSFYNGTTTLPISDEDRTPR 25 1 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 VINAAHSFY(0.001)NGTTTLPIS(0.285)DEDRT(0.712)PR 61.16 0.0034054 8540900 17316 27951 25385 25607 25052 30427 25800 18113 26489 26473 TRUE FALSE 18641.72627 26562.99398 26231.32323 23514.82619 24068.3326 31584.92081 22412.42901 20480.43129 28792.96534 25609.18818 0.727931168 1.037244672 1.024293431 0.918218337 0.939831924 1.233343306 0.875171398 0.799729814 1.124321675 1 14.6443739 -4.754911462 24.89258243 0.988970375 0.727930704 0.316101074 0.117439575 271.1085388 1033703.772 0.029362324 0.272944594 1.76E-05 4.754911462 -0.261039671 VIPAKS(ph)PPPPTHSTQLGAPSR ddPTM_A459_MK2206_30min_R1 2 VIPAKSPPPPTHSTQLGAPSR 21 1 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 VIPAKS(1)PPPPTHSTQLGAPSR;VIPAKS(0.968)PPPPT(0.002)HS(0.023)T(0.008)QLGAPSR 103.73 9.70E-05 74808000 7566.7 3779.7 4544 3605.18 9995 9825.3 8328.6 7002.7 3442.1 3065.2 TRUE FALSE 6923.112431 3533.640843 4235.56594 3882.851588 9596.877985 10381.6 7773.01429 6941.476132 3799.918613 3444.940117 2.009646669 1.025748118 1.229503503 1.127117296 2.785789494 3.013579233 2.256356867 2.014977299 1.103043444 1 11.75026319 -4.456892104 22.2005346 1.797972506 8.184351233 0.005292967 0.721104026 3832.884031 1299761.293 0.191591066 9591.011366 3.49E-05 4.456892104 6.386378727 VIPAKS(ph)PPPPTHSTQLGAPSR ddPTM_A459_MK2206_30min_R2 4 VIPAKSPPPPTHSTQLGAPSR 21 1 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 VIPAKS(0.943)PPPPT(0.029)HS(0.02)T(0.008)QLGAPSR;VIPAKS(0.999)PPPPTHSTQLGAPSR;VIPAKS(0.902)PPPPT(0.021)HS(0.052)T(0.023)QLGAPS(0.001)R;VIPAKS(0.975)PPPPTHS(0.012)T(0.01)QLGAPS(0.002)R 84.436 0.00064666 140263000 59563.3 118434 88388 150571 169708 167285 149473 98197 142876 86235 TRUE FALSE 64123.51204 112552.7398 91334.81181 138268.8676 163044.4112 173651.1479 129847.0156 111031.6851 155303.0962 83421.15901 0.768672035 1.349210933 1.094863856 1.657479581 1.954473099 2.081619939 1.556523754 1.330977493 1.86167512 1 16.34812574 -5.766523518 7.413220975 1.678102024 1.097059019 0.385566484 0.322435883 0.128680068 43.17305356 0.08966821 0.1425043 1.71E-06 5.766523518 -0.581043005 VIPEDAS(ph)ESEEK ddPTM_A459_MK2206_30min_R2 1 VIPEDASESEEK 12 0 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 VIPEDAS(0.795)ES(0.205)EEK 88.092 0.033098 0 37948 33494 34303 27407 29747 22795 38409 30115 20932 37334 TRUE FALSE 40853.32806 31830.73666 35446.6449 25167.76043 28578.98331 23662.4797 33365.85216 34051.1339 22752.62752 36115.79464 1.13117622 0.881352244 0.981472103 0.696862984 0.791315368 0.655183693 0.923857622 0.942832194 0.629991054 1 15.14034229 -4.18236175 1.025109385 0.809563686 1.821608596 0.346534131 0.12662221 6.081828361 2.185256507 0.039436352 9.076228485 6.57E-05 4.18236175 1.01204491 VIPEDAS(ph)ESEEKLDQK ddPTM_A459_MK2206_30min_R1 1 VIPEDASESEEKLDQK 16 1 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 VIPEDAS(0.888)ES(0.112)EEKLDQK 85.046 0.0091361 9708700 3151.8 4333.3 4375.5 3334.4 2130.3 2367.7 3543.7 2821.3 4939.9 4820.3 TRUE FALSE 2883.722859 4051.201382 4078.503251 3591.216066 2045.44564 2501.757128 3307.306239 2796.633672 5453.420283 5417.475155 0.532300154 0.747802485 0.752842078 0.662894792 0.377564378 0.461793927 0.610488492 0.51622455 1.006635033 1 12.40340492 -8.267134488 24.77284489 1.003317616 0.586637288 0.689808714 0.112788382 276.9627906 1204723.535 0.110862248 0.031766463 5.41E-09 8.267134488 -0.416680328 VIPEDAS(ph)ESEEKLDQK ddPTM_A459_MK2206_30min_R2 1 VIPEDASESEEKLDQK 16 1 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 VIPEDAS(0.835)ES(0.165)EEKLDQK 56.819 0.047532 19699000 89611 63673 73689 62188 55898 37521 76413 62276 47937 88800 TRUE FALSE 96471.68706 60511.09141 76145.75448 57107.04147 53703.16366 38948.88795 66379.88131 70415.68703 52106.47361 85902.46327 1.123037494 0.704416254 0.886421082 0.664789335 0.62516442 0.453408278 0.772735481 0.819716739 0.606577176 1 16.39041188 -3.279866976 9.947746851 0.747095845 0.903505929 0 0.189762063 0 0 0.043009412 0 0.000524968 3.279866976 0.156410084 VIPELNGK ddPTM_A459_MK2206_30min_R2 1 VIPELNGK 8 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 132.08 0.047149 18551000 172300 184510 151750 167820 181200 160380 185360 141930 156290 153270 FALSE TRUE 185491.4205 175347.5017 156809.2693 154108.5692 174085.1775 166483.3733 161022.0093 160480.7383 169883.8217 148268.8125 1.251048129 1.182632401 1.057601168 1.039386278 1.174118648 1.122848228 1.086014022 1.082363416 1.145782575 1 17.17785564 -5.032736253 3.675516003 1.094231509 1.243375166 0.544081741 0.04856078 0.169023047 4.723910616 0.012507474 0.048284105 9.27E-06 5.032736253 0.149143657 VIQLMPS(ph)PIMHPLILNPR ddPTM_A459_MK2206_30min_R1 1 VIQLMPSPIMHPLILNPR 18 0 P41212 P41212 ETV6 Transcription factor ETV6 1 VIQLMPS(1)PIMHPLILNPR 109.37 0.0018722 3313600 745.64 558.73 838.11 831.87 822.33 791.66 900.85 652.56 646.04 531.92 TRUE FALSE 682.2194025 522.3565754 781.2214283 895.9407715 789.5748548 836.4831051 840.7559402 646.8547367 713.1981699 597.8182654 1.141181931 0.873771522 1.306787486 1.498684171 1.320760673 1.39922641 1.406373791 1.082025716 1.193001638 1 9.223563167 -5.277678544 24.5202746 1.297416105 1.007476738 0.312916173 0.156487911 598.7943475 904147.5268 0.041377411 0.086588003 5.28E-06 5.277678544 -0.289939367 VIQLMPS(ph)PIMHPLILNPR ddPTM_A459_MK2206_30min_R2 2 VIQLMPSPIMHPLILNPR 18 0 P41212 P41212 ETV6 Transcription factor ETV6 1 VIQLMPS(1)PIMHPLILNPR;VIQLMPS(1)PIMHPLILNPR 110.33 0.00091643 4551800 12173 17088.2 12551.7 16959.4 16884.9 18456.6 13796 12465.1 17569.7 17866.9 TRUE FALSE 13104.97424 16239.62484 12970.16741 15573.76277 16221.91399 19158.97885 11984.56863 14094.33137 19097.88075 17283.90452 0.758218389 0.9395808 0.75041883 0.901055821 0.938556098 1.108486733 0.693394749 0.815459919 1.104951762 1 14.07714155 -1.522878746 0.107399444 1.044517807 0.363828233 0.157100357 0.126825313 266.7857475 2.015958635 1.318717973 26.8551 0.03 1.522878746 -0.680689574 VIQPMGMS(ph)PR ddPTM_A459_MK2206_30min_R1 2 VIQPMGMSPR 10 0 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3 H0YE35 RIC8A Synembryn-A 1 VIQPMGMS(1)PR;VIQPMGMS(1)PR 106.79 0.011689 33590000 6703.6 5273.9 5717.6 5220.5 6147.5 6080.4 6186 6747.9 5836.3 5614.3 TRUE FALSE 6133.423618 4930.568151 5329.505242 5622.583815 5902.632057 6424.666993 5773.343227 6688.903822 6443.00427 6309.84187 0.972040781 0.781409147 0.844633725 0.891081572 0.93546434 1.018197781 0.914974313 1.060074715 1.02110392 1 12.62338814 -6.43022031 1.650780755 1.004255394 0.858016975 0.545620435 0.055940659 0.274820403 1.501978474 0.021030123 0.024764699 3.71E-07 6.43022031 -0.146238419 VIQPMGMS(ph)PR ddPTM_A459_MK2206_30min_R2 4 VIQPMGMSPR 10 0 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3 H0YE35 RIC8A Synembryn-A 1 VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR 121.21 0.0048484 49114400 155587 162264 143094 176146 171910 185304 200367 138365 171762 190456 TRUE FALSE 167498.8603 154206.2057 147864.6825 161754.3083 165159.9496 192355.8736 174058.5722 156449.7806 186701.5483 184241.4363 0.909126979 0.83697896 0.802559324 0.8779475 0.896432165 1.044042412 0.944730869 0.849156323 1.013352653 1 17.49123804 -6.530889682 24.72982258 0.960456047 0.855859755 0.484631132 0.055232283 158.3290966 488758.8597 0.018756296 0.018789671 2.95E-07 6.530889682 -0.104596292 VIQS(ph)PAADTR ddPTM_A459_MK2206_30min_R2 1 VIQSPAADTR 10 0 B9EGE7;Q8TCN5-2;Q8TCN5 B9EGE7 ZNF507 Zinc finger protein 507 1 VIQS(1)PAADTR 109.16 0.01024 3380300 20051 23976 22732 25586 20230 29775 27229 18651 27990 19222 TRUE FALSE 21586.11998 22785.3867 23489.87353 23495.54195 19435.66855 30908.10849 23653.79959 21088.74974 30424.51961 18594.78771 1.160869396 1.225364175 1.263250428 1.263555267 1.04522132 1.66219206 1.272066127 1.134121565 1.636185369 1 14.18261066 VIS(ph)DCECVPQK ddPTM_A459_MK2206_30min_R2 1 VISDCECVPQK 11 0 Q7Z4H7;Q5VY60;Q7Z4H7-3 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 1 VIS(1)DCECVPQK 146.07 0.00069064 8852900 35488 34561 34413 38410 35204 34464 44615 28497 30667 44095 TRUE FALSE 38204.98857 32844.751 35560.31224 35271.78013 33821.71407 35775.55167 38756.99691 32221.65574 33334.36023 42656.18376 0.895649474 0.769988032 0.83364964 0.826885507 0.792891232 0.838695554 0.908590349 0.755380648 0.781466069 1 15.38046728 -6.98332744 24.41029496 0.845641273 0.820965077 0.041052822 0.070153509 879.0522485 1287014.036 0.024097749 0.021247035 1.04E-07 6.98332744 -0.024676197 VIS(ph)DSESDIGGSDVEFKPDTK ddPTM_A459_MK2206_30min_R1 1 VISDSESDIGGSDVEFKPDTK 21 1 P52701-2;P52701;P52701-3;A0A087WWJ1;A0A494C0M1 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 VIS(0.681)DS(0.132)ES(0.177)DIGGS(0.01)DVEFKPDTK 73.404 0.0021222 3691600 550.39 681.45 861.23 727.43 740.78 502.09 881.51 666.16 953.81 921.86 TRUE FALSE 503.5764403 637.0874811 802.7721071 783.4567846 711.273164 530.5179019 822.7060763 660.3358334 1052.961963 1036.066976 0.486046223 0.614909553 0.774826459 0.756183531 0.686512726 0.512049813 0.794066499 0.637348597 1.016306848 1 10.01690155 -8.263327553 24.95222294 1.008153479 0.664145955 0.67085617 0.098096252 100.4853303 1327857.79 0.082308266 0.025423981 5.45E-09 8.263327553 -0.344007525 VISELNGK ddPTM_A459_MK2206_30min_R2 1 VISELNGK 8 0 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 0 133.6 0.041826 3527700 28870 32854 20998 35489 33794 26162 34646 27179 30037 34167 FALSE TRUE 31080.3094 31222.51813 21698.06284 32589.43518 32467.07776 27157.61324 30096.93858 30731.38862 32649.56397 33052.13359 0.940342 0.944644558 0.656479945 0.986000952 0.982299 0.821659914 0.910589887 0.92978532 0.987820162 1 15.01245578 -8.096750671 1.824360154 1.000471406 0.888408208 0.167392964 0.090969887 0.679980876 4.031894715 0.08335972 0.026247214 8.00E-09 8.096750671 -0.112063198 VISFIENTS(ph)TPVDR ddPTM_A459_MK2206_30min_R1 1 VISFIENTSTPVDR 14 0 E9PGE5;Q9NUY8-2;Q9NUY8 E9PGE5 TBC1D23 TBC1 domain family member 23 1 VISFIENT(0.043)S(0.478)T(0.478)PVDR 199.38 9.24E-22 0 1288.9 1059.9 1010.6 924.28 1176.9 914.87 1451.7 1047.2 948.81 1073.2 TRUE FALSE 1179.272287 990.9003174 942.0032877 995.4682057 1130.021581 966.6691488 1354.859742 1038.044441 1047.442195 1206.156118 0.977711151 0.821535705 0.780996153 0.825322851 0.936878372 0.801446126 1.123287211 0.860621959 0.868413449 1 10.23620094 VISFIENTST(ph)PVDR ddPTM_A459_MK2206_30min_R1 1 VISFIENTSTPVDR 14 0 E9PGE5;Q9NUY8-2;Q9NUY8 E9PGE5 TBC1D23 TBC1 domain family member 23 1 VISFIENT(0.091)S(0.027)T(0.882)PVDR 180.95 0.00017378 3042200 3216.8 2424.6 2611.7 2322 2750.4 2120.1 3047.3 2502 2614.9 2597.4 TRUE FALSE 2943.194268 2266.758099 2434.425081 2500.840842 2640.845744 2240.13823 2844.020177 2480.125278 2886.728213 2919.185521 1.008224468 0.776503611 0.833939831 0.856691301 0.904651563 0.767384674 0.974251262 0.84959495 0.988881382 1 11.51135019 -8.243485222 1.136880706 1.00530568 0.860039995 0.284602771 0.074029895 0.566199242 1.460943602 0.06553795 0.021702581 5.71E-09 8.243485222 -0.145265685 VISFIENTST(ph)PVDR ddPTM_A459_MK2206_30min_R2 1 VISFIENTSTPVDR 14 0 E9PGE5;Q9NUY8-2;Q9NUY8 E9PGE5 TBC1D23 TBC1 domain family member 23 1 VISFIENT(0.017)S(0.119)T(0.864)PVDR 111.72 0.0089825 0 6491.7 6584 6094.2 6185.9 6543.5 7723.4 6872.4 5751.4 4814.8 6254.2 TRUE FALSE 6988.709543 6257.048134 6297.377586 5680.492182 6286.569312 8017.319399 5970.045625 6503.127728 5233.582601 6050.125966 1.155134551 1.034201299 1.040867185 0.938904779 1.039080731 1.325149169 0.986763856 1.074874765 0.865036965 1 12.56274946 -8.242749263 23.2224253 0.932518505 1.071663221 0.228370755 0.104204864 435.7592288 541433.5987 0.072251445 0.027169429 5.72E-09 8.242749263 0.139144717 VISGTTLGYLS(ph)PK ddPTM_A459_MK2206_30min_R1 2 VISGTTLGYLSPK 13 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 VISGTTLGYLS(1)PK;VISGTTLGYLS(1)PK 126.56 0.0020151 49868000 10096.4 10838.1 10655.2 7864.1 6458 5272.1 6610.4 5936.4 6968.2 7140.1 TRUE FALSE 9237.648162 10132.53772 9931.954711 8469.794345 6200.764185 5570.601746 6169.432277 5884.498681 7692.569326 8024.669493 1.151156215 1.262673526 1.237677729 1.055469556 0.772712719 0.694184571 0.768808271 0.733301064 0.958615097 1 12.97022626 -6.066741979 3.022410711 0.799113924 1.219305708 0.776872714 0.095592018 0.110321798 1.980150842 0.029053354 0.040972612 8.58E-07 6.066741979 0.420191784 VISGTTLGYLS(ph)PK ddPTM_A459_MK2206_30min_R2 2 VISGTTLGYLSPK 13 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 VISGTTLGYLS(1)PK;VISGTTLGYLS(1)PK 127.32 0.0019386 31282000 137146 113694 117631 81586 91137 73025 91730 70030 62527 103430 TRUE FALSE 147646.0032 108048.1213 121552.7588 74920.16282 87558.50345 75804.01755 79685.74081 79183.16145 67965.48544 100055.0876 1.475647134 1.07988633 1.214858352 0.748789138 0.875102962 0.757622819 0.79641868 0.791395654 0.679280655 1 16.610435 -4.877583959 0.77208482 0.783338778 1.753849327 0.74411442 0.120802673 1.114442924 0.556605697 0.04545922 0.914040826 1.33E-05 4.877583959 0.970510548 VISHDRDS(ph)PPPPPPPPPPPQPQPSLK ddPTM_A459_MK2206_30min_R1 2 VISHDRDSPPPPPPPPPPPQPQPSLK 26 1 Q69YN4-3;Q69YN4;Q69YN4-4;Q69YN4-2 Q69YN4-3 KIAA1429 Protein virilizer homolog 1 VIS(0.216)HDRDS(0.784)PPPPPPPPPPPQPQPSLK;VIS(0.435)HDRDS(0.565)PPPPPPPPPPPQPQPSLK 153.31 1.15E-14 6643100 2033.11 1880.02 2024.94 1962.18 2042.34 1961.63 1883.24 1836.39 2103.72 1846.99 TRUE FALSE 1860.183318 1757.630356 1887.492715 2113.307444 1960.989273 2072.695795 1757.612496 1820.334636 2322.409222 2075.809065 0.89612448 0.846720628 0.909280505 1.018064464 0.944686728 0.998500214 0.846712024 0.87692778 1.118797129 1 11.01945803 -1.522878745 0.233798206 0.988286623 0.29949699 0.194551198 0.074573994 98.33110084 1.29758008 0.110496791 26.05582471 0.03 1.522878745 -0.688789633 VIVGS(ph)PR ddPTM_A459_MK2206_30min_R2 2 VIVGSPR 7 0 A0A1C7CYW6;A0A1B0GWB1;A0A1B0GTQ2;P0DI83 A0A1C7CYW6 RAB34 "Ras-related protein Rab-34, isoform NARR" 1 VIVGS(1)PR;VIVGS(1)PR 98.582 0.021764 9498000 53274 61333 59854 67757 60227 65668 71060 51391 57110 64658 TRUE FALSE 57352.6984 58287.29241 61849.50249 62221.03636 57862.18536 68167.04176 61729.73664 58107.98015 62077.32457 62548.21476 0.916935817 0.931877794 0.988829221 0.994769181 0.925081325 1.089831932 0.986914445 0.92901101 0.992471565 1 15.93268109 -5.202134219 3.898558677 0.987553602 0.920501361 0.267915904 0.042502152 0.315324915 9.684621884 0.011287657 0.033091359 6.28E-06 5.202134219 -0.06705224 VIVVGNPANTNCLTAS(ph)K ddPTM_A459_MK2206_30min_R2 1 VIVVGNPANTNCLTASK 17 0 A0A5K1VW95;P40925;P40925-3;B9A041;P40925-2;C9JRL4;C9JF79 A0A5K1VW95 MDH1 "Malate dehydrogenase, cytoplasmic;Malate dehydrogenase" 1 VIVVGNPANT(0.03)NCLT(0.146)AS(0.824)K 73.168 0.025735 10742000 29639 31636 22300 22031 21677 24507 34565 17104 24888 26853 TRUE FALSE 31908.18463 30065.00224 23043.47087 20230.99683 20825.85206 25439.63106 30026.57398 19339.55153 27052.71325 25976.78881 1.228334451 1.157379477 0.887079271 0.778810536 0.801710027 0.979321626 1.155900146 0.744493543 1.041418685 1 14.66493548 -5.186325261 4.422691345 0.915155309 1.208594639 0.441360827 0.121566668 0.200071043 7.336036818 0.032272948 0.092861361 6.51E-06 5.186325261 0.29343933 VKADRDESSPYAAMLAAQDVAQR ddPTM_A459_MK2206_30min_R1 2 VKADRDESSPYAAMLAAQDVAQR 23 2 P62263;A0A2R8Y811;E5RH77 P62263 RPS14 40S ribosomal protein S14 0 ; 54.457 0.011018 41343400 11369.3 12132.7 11707.1 13093.6 13855.3 11451.6 10145.5 12396.2 7458.9 5334.4 FALSE TRUE 10402.28133 11342.85902 10912.45467 14102.07134 13303.41406 12099.9797 9468.712207 12287.82133 8234.279347 5995.265745 1.735082609 1.891969348 1.820178643 2.35220121 2.218986552 2.018255772 1.579364887 2.049587433 1.373463612 1 12.54960799 -8.448501109 2.728799544 0.999586592 1.965697782 0.686355311 0.215010508 0.150135282 2.346395374 0.220958712 0.059797219 3.56E-09 8.448501109 0.966111189 VKAPVHFVEPLS(ph)PTGVAGHR ddPTM_A459_MK2206_30min_R1 2 VKAPVHFVEPLSPTGVAGHR 20 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 VKAPVHFVEPLS(0.92)PT(0.08)GVAGHR;VKAPVHFVEPLS(0.872)PT(0.128)GVAGHR 92.39 0.00060219 30569000 15612.8 17239.5 14868.2 14572.6 15096.7 12546.2 11411.3 11807.1 10048.7 8359.1 TRUE FALSE 14284.84937 16117.20542 13858.98801 15694.98418 14495.36647 13256.555 10650.073 11703.87177 11093.29832 9394.688416 1.520524018 1.715565722 1.475194003 1.670623174 1.542932115 1.41106915 1.133627059 1.245796694 1.180805348 1 13.1976296 -7.029275788 2.005276889 1.152415007 1.596630645 0.851037357 0.087608933 0.11864808 0.953551823 0.037378533 0.028392507 9.35E-08 7.029275788 0.444215639 VKAPVHFVEPLS(ph)PTGVAGHR ddPTM_A459_MK2206_30min_R2 2 VKAPVHFVEPLSPTGVAGHR 20 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 VKAPVHFVEPLS(0.972)PT(0.028)GVAGHR;VKAPVHFVEPLS(0.927)PT(0.073)GVAGHR 102.16 0.00028152 31013000 117928 183645 146806 169783 186584 154651 157091 121044 146572 122791 TRUE FALSE 126956.6584 174525.4563 151700.4388 155911.1858 179257.7747 160536.3522 136464.763 136864.8664 159320.5676 118784.3397 1.06879963 1.469263177 1.277108069 1.312556741 1.509102758 1.35149425 1.148844733 1.15221305 1.341259024 1 16.85798512 -9.084807136 0.488118665 0.985788421 1.330776062 0.303391857 0.132469723 2.65485865 1.103108261 0.246356532 0.072393004 8.23E-10 9.084807136 0.344987641 VKAQT(ph)PPGPSLSGSK ddPTM_A459_MK2206_30min_R1 2 VKAQTPPGPSLSGSK 15 1 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VKAQT(1)PPGPSLSGSK;VKAQT(0.719)PPGPS(0.065)LS(0.216)GSK 165.24 0.00090878 36774000 9728.6 10552.7 11499.8 9344 9606 8417.4 9485.6 9641.6 8798.6 8628.9 TRUE FALSE 8901.131483 9865.717312 10719.22562 10063.6765 9223.372679 8893.985914 8852.832931 9557.304508 9713.245956 9697.913277 0.917839872 1.017303107 1.105312587 1.037715662 0.951067762 0.917103057 0.912859569 0.985501132 1.001581029 1 13.24345864 -6.265175319 24.4465725 0.955990067 1.025509243 0.22793458 0.051439855 330.7749557 2164460.218 0.016846454 0.019852422 5.43E-07 6.265175319 0.069519176 VKAQT(ph)PPGPSLSGSK ddPTM_A459_MK2206_30min_R2 1 VKAQTPPGPSLSGSK 15 1 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VKAQT(0.957)PPGPS(0.042)LS(0.001)GS(0.001)K 99.092 0.011709 101270000 190930 218050 193860 186560 188990 140150 225900 183900 140040 210760 TRUE FALSE 205547.7476 207221.9541 200323.1956 171317.4512 181569.303 145483.5065 196239.0586 207936.3614 152220.4261 203882.9185 1.008165614 1.016377221 0.982540358 0.840273685 0.890556719 0.713563979 0.962508582 1.019881229 0.746607059 1 17.63738138 -5.644969421 5.287051418 0.879730042 1.009039811 0.259254578 0.093896335 0.281247888 11.80997547 0.025748614 0.045324378 2.26E-06 5.644969421 0.129309769 VKEDPDGEHAR ddPTM_A459_MK2206_30min_R1 1 VKEDPDGEHAR 11 1 A0A087X0X3;P52272-2;P52272;M0R2T0;M0R019;M0QYQ7;M0R0N3 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 89.9 0.022766 7531900 11595 10627 9860.7 10560 5223.1 6915.5 11981 12966 0 7126.8 FALSE TRUE 10608.78436 9935.180368 9191.383157 11373.33303 5015.052867 7307.049634 11181.76935 12852.63963 0 8009.721789 1.324488496 1.240390195 1.147528391 1.419941083 0.626120732 0.912272589 1.396024687 1.604629969 0 1 12.96753642 -3.344865613 0.216679437 0.871266659 2.119019752 0.10476179 0.421657988 67.37345849 1.68004958 0.728854379 24.9415954 0.000451996 3.344865613 1.247753093 VKEDPDGEHAR ddPTM_A459_MK2206_30min_R2 3 VKEDPDGEHAR 11 1 A0A087X0X3;P52272-2;P52272;M0R2T0;M0R019;M0QYQ7;M0R0N3 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 ;; 93.442 0.018791 58352000 181138 212297 182411 204282 202619 171116 217467 184905 186568 198430 FALSE TRUE 195006.0646 201754.6397 188492.4917 187591.5071 194663.16 177627.9393 188913.3217 209072.7184 202795.3474 191955.2454 1.015893388 1.051050412 0.98196062 0.977266898 1.01410701 0.925361216 0.984152954 1.089174292 1.056472028 1 17.55041046 -7.745713734 24.99898234 1.054617373 0.992273977 0.321144134 0.036803201 253.6296655 403195.591 0.018115662 0.01041353 1.80E-08 7.745713734 -0.062343396 VKEEASS(ph)PLK ddPTM_A459_MK2206_30min_R2 1 VKEEASSPLK 10 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 VKEEAS(0.091)S(0.909)PLK 135.02 0.009546 12498000 68995 72065 66306 65110 59306 39392 77606 53512 42899 76815 TRUE FALSE 74277.31025 68486.35689 68516.60895 59790.30472 56977.34845 40891.09016 67416.23898 60506.20213 46630.27748 74308.53284 0.999579825 0.921648622 0.922055736 0.804622329 0.766767238 0.550287949 0.907247612 0.81425645 0.627522516 1 16.18124026 -5.7529071 2.25624661 0.764005572 0.958355637 0.286179747 0.120851613 0.368839109 3.82870623 0.035544185 0.067612495 1.77E-06 5.7529071 0.194350065 VKEEPPS(ph)PPQSPR ddPTM_A459_MK2206_30min_R1 2 VKEEPPSPPQSPR 13 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 1 VKEEPPS(0.518)PPQS(0.482)PR;VKEEPPS(0.981)PPQS(0.019)PR 144.15 0.0032496 56888600 7107 6868.1 7856.4 6387.2 7783.5 7634.1 7815.9 8609.9 6660.4 6492.8 TRUE FALSE 6502.51233 6420.985442 7323.129457 6879.143251 7473.466713 8066.336145 7294.515572 8534.624552 7352.772414 7297.177082 0.891099703 0.879927316 1.003556495 0.942712939 1.024158607 1.105405015 0.999635269 1.169578928 1.007618745 1 12.83312275 -5.722560836 0.83470056 1.065871038 0.867712321 0.543516494 0.056537459 0.607247834 0.742455132 0.024118048 0.087068999 1.89E-06 5.722560836 -0.198158717 VKEGMNIVEAMER ddPTM_A459_MK2206_30min_R1 2 VKEGMNIVEAMER 13 1 P62937;P62937-2 P62937 PPIA "Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed" 0 ; 112.84 0.012789 59343000 6781.3 6592.9 6628.1 6735.2 7283.9 6650 7283.4 7327.2 4844.9 4513.9 FALSE TRUE 6204.514825 6163.701012 6178.203039 7253.946271 6993.766839 7026.517253 6797.537675 7263.139063 5348.544693 5073.11601 1.223018518 1.214973401 1.217832004 1.429879833 1.378593911 1.385049591 1.339913706 1.431691893 1.054291816 1 12.30865644 -8.357596191 5.590869623 1.008703559 1.327215368 0.69416493 0.079939787 0.142227704 6.377795861 0.084989047 0.0221556 4.39E-09 8.357596191 0.318511809 VKEPS(ph)VQEATSTSDILK ddPTM_A459_MK2206_30min_R1 1 VKEPSVQEATSTSDILK 17 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VKEPS(0.979)VQEAT(0.012)S(0.004)T(0.002)S(0.003)DILK 67.785 0.020934 6841400 1594.1 2042.3 2161.5 1636.8 1556.2 1299.4 1835 1727.7 2195.6 1779.2 TRUE FALSE 1458.513424 1909.345899 2014.783402 1762.86662 1494.213259 1372.970905 1712.590498 1712.594901 2423.840477 1999.620728 0.729395031 0.954854024 1.007582775 0.881600493 0.747248334 0.686615659 0.856457664 0.856459866 1.212150106 1 10.96551067 -8.241103153 20.91828612 1.106074702 0.843166501 0.505987197 0.105115938 75.16436107 77317.33591 0.076443836 0.028731226 5.74E-09 8.241103153 -0.262908201 VKEPS(ph)VQEATSTSDILK ddPTM_A459_MK2206_30min_R2 2 VKEPSVQEATSTSDILK 17 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VKEPS(0.617)VQEAT(0.192)S(0.114)T(0.055)S(0.022)DILK;VKEPS(0.976)VQEAT(0.017)S(0.004)T(0.002)S(0.001)DILK 116.04 0.00090053 24623000 92000 81630 84298 85551 80418 59730 104382 73636 64794 93243 TRUE FALSE 99043.59074 77576.3729 87108.45325 78561.20964 77260.38525 62003.067 90676.51801 83260.47803 70429.665 90200.48855 1.098038296 0.860043822 0.965720415 0.87096213 0.856540652 0.687391698 1.00527746 0.923060167 0.780812456 1 16.46084763 VKESSIIAPAPAEDVDT(ph)PPR ddPTM_A459_MK2206_30min_R1 4 VKESSIIAPAPAEDVDTPPR 20 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 VKESSIIAPAPAEDVDT(1)PPR;VKESSIIAPAPAEDVDT(1)PPR;VKESSIIAPAPAEDVDT(1)PPR;VKESSIIAPAPAEDVDT(1)PPR 155.39 2.56E-06 74934700 22951.5 23428.6 22794 22197.2 24297.7 22359.9 21574.6 23307.2 16999.2 13451 TRUE FALSE 20999.3544 21903.39388 21246.80679 23906.83219 23329.87116 23625.89821 20135.3978 23103.42761 18766.32767 15117.41143 1.389084004 1.448885213 1.405452705 1.581410435 1.543245103 1.562826964 1.331934233 1.528266113 1.241371763 1 13.88392351 -8.522651678 2.89046521 1.000567818 1.47502424 0.787067313 0.078394657 0.10931808 2.241053736 0.077365015 0.020714883 3.00E-09 8.522651678 0.474456421 VKESSIIAPAPAEDVDT(ph)PPR ddPTM_A459_MK2206_30min_R2 3 VKESSIIAPAPAEDVDTPPR 20 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 VKESSIIAPAPAEDVDT(1)PPR;VKESSIIAPAPAEDVDT(1)PPR;VKESSIIAPAPAEDVDT(1)PPR 99.753 0.0011072 68240000 157911 237133 207703 222246 258392 231342 224704 167188 221333 202352 TRUE FALSE 170000.7876 225357.32 214627.7144 204087.7909 248246.2318 240145.8819 195200.0949 189040.0456 240584.1443 195749.2708 0.86846192 1.151254966 1.096441961 1.042597962 1.268184708 1.226803456 0.997194493 0.965725414 1.229042352 1 17.57864741 -4.7554814 24.94955082 1.110271377 0.868461516 0.330824348 0.102427144 238.8508426 1000106.779 0.026221179 0.232279949 1.76E-05 4.7554814 -0.241809862 VKGDVDVSLPK ddPTM_A459_MK2206_30min_R1 1 VKGDVDVSLPK 11 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 103.46 0.015495 0 9801.3 7951 7747.3 8700.5 8192.9 8857.4 8911.6 8393.2 7322.1 6095.7 FALSE TRUE 8967.647966 7433.388455 7221.434861 9370.614018 7866.559444 9358.898334 8317.123424 8319.819137 8083.258497 6850.881336 1.308977273 1.085026596 1.054088446 1.367796865 1.148255102 1.366086767 1.214022403 1.214415887 1.17988593 1 12.74207388 -8.846494979 2.026413342 1.000040957 1.217136541 0.296819968 0.101057487 2.181797994 11.94978781 0.097472449 0.026901904 1.42E-09 8.846494979 0.217095584 VKPAS(ph)PVAQPK ddPTM_A459_MK2206_30min_R1 2 VKPASPVAQPK 11 1 Q96EV2;H0Y3K4 Q96EV2 RBM33 RNA-binding protein 33 1 VKPAS(1)PVAQPK;VKPAS(1)PVAQPK 136.33 0.0067606 217790000 15692.8 18467.1 17379.1 14960.8 13006.7 12099.9 14116 14610.1 14689.1 12568.7 TRUE FALSE 14358.04495 17264.88843 16199.45511 16113.08341 12488.6156 12784.98588 13174.3474 14482.36544 16216.08451 14125.80544 1.016440798 1.222223292 1.146798685 1.140684223 0.884099363 0.905080134 0.932643979 1.025241746 1.147975921 1 13.78604551 -6.238201104 24.05041671 0.977404469 1.13910454 0.431040945 0.083576646 470.8484067 487303.2098 0.025994905 0.033533041 5.78E-07 6.238201104 0.161700071 VKPAS(ph)PVAQPK ddPTM_A459_MK2206_30min_R2 2 VKPASPVAQPK 11 1 Q96EV2;H0Y3K4 Q96EV2 RBM33 RNA-binding protein 33 1 VKPAS(1)PVAQPK;VKPAS(1)PVAQPK 75.911 0.028805 530230000 2119130 2210810 2259680 2166810 1951110 1434270 2275410 1915540 1643990 1963290 TRUE FALSE 2281372.222 2101024.39 2335016.603 1989774.692 1874499.618 1488852.15 1976645.934 2165907.655 1786981.279 1899228.008 1.201210288 1.106251794 1.229455649 1.04767552 0.986979768 0.783924912 1.040762839 1.140414761 0.94089876 1 20.85698169 -5.944354296 4.329264797 0.98428673 1.170879469 0.494122897 0.088726595 0.197778272 7.716477383 0.027402423 0.041105346 1.14E-06 5.944354296 0.186592739 VKPPGGHS(ph)PQVNHLK ddPTM_A459_MK2206_30min_R2 2 VKPPGGHSPQVNHLK 15 1 Q92610 Q92610 ZNF592 Zinc finger protein 592 1 VKPPGGHS(1)PQVNHLK;VKPPGGHS(1)PQVNHLK 59.294 0.037621 63818000 168845 199727 181919 191640 161692 146841 182956 143234 120481 177199 TRUE FALSE 181771.903 189808.8476 187984.0887 175982.399 155343.1596 152429.1372 158933.6574 161955.1756 130960.2196 171417.0111 1.06040761 1.107292948 1.096647803 1.026633225 0.906229543 0.889229932 0.927175526 0.944802237 0.763986134 1 17.38715076 -6.121894641 2.685105385 0.901465635 1.089386333 0.681109176 0.057205602 0.1554805 2.178524106 0.017374471 0.024019746 7.55E-07 6.121894641 0.187920698 VKPPPQIS(ph)PSK ddPTM_A459_MK2206_30min_R1 1 VKPPPQISPSK 11 1 K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6;Q9H6U6-8;Q9H6U6-3;Q9H6U6-7 K7ESE9;Q9H6U6-8 BCAS3 Breast carcinoma-amplified sequence 3 1 VKPPPQIS(0.892)PS(0.108)K 115.12 0.029762 9213800 1553.9 1529.3 1702.4 1436.8 1617.9 1481.9 1424.8 1366.4 1289.5 1163.5 TRUE FALSE 1421.732645 1429.742292 1586.845831 1547.462585 1553.455617 1565.803897 1329.754192 1354.453709 1423.54814 1307.643164 1.087248176 1.09337343 1.213515946 1.183398214 1.187981293 1.197424451 1.016909068 1.035797644 1.088636548 1 10.35275319 -7.265351407 24.98240976 1.038318947 1.162140611 0.654618939 0.044504774 232.0765304 1482042.334 0.019681477 0.013824682 5.43E-08 7.265351407 0.123821664 VKPPPQISPS(ph)K ddPTM_A459_MK2206_30min_R2 2 VKPPPQISPSK 11 1 K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6;Q9H6U6-8;Q9H6U6-3;Q9H6U6-7 K7ESE9;Q9H6U6-8 BCAS3 Breast carcinoma-amplified sequence 3 1 VKPPPQIS(0.071)PS(0.929)K;VKPPPQIS(0.224)PS(0.776)K 108.36 0.0055091 37781000 261009 278250 257464 254857 264781 227060 316040 215237 226207 277350 TRUE FALSE 280992.0497 264432.5096 266047.7213 234034.3679 254384.3675 235700.9274 274543.5684 243369.2149 245882.076 268300.0922 1.047305081 0.985584863 0.991605031 0.872285827 0.948133731 0.878497378 1.023270496 0.907078387 0.916444247 1 18.03348802 -5.151278821 1.678941007 0.934270878 1.044083491 0.329476142 0.047722531 0.572485612 2.530382122 0.013211703 0.080433709 7.06E-06 5.151278821 0.109812612 VKPPPS(ph)PTTEGPSLQPDLAPEEAAGTQRPK ddPTM_A459_MK2206_30min_R1 2 VKPPPSPTTEGPSLQPDLAPEEAAGTQRPK 30 2 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 VKPPPS(0.428)PT(0.281)T(0.281)EGPS(0.009)LQPDLAPEEAAGTQRPK;VKPPPS(0.273)PT(0.273)T(0.273)EGPS(0.181)LQPDLAPEEAAGTQRPK 103.36 4.94E-09 115543000 9808.1 9222 9457.4 9267.1 8938.3 7578.7 7929.2 9023.3 8020.7 7396.1 TRUE FALSE 8973.869591 8621.646124 8815.458038 9980.853648 8582.268584 8007.799445 7400.257536 8944.410239 8854.480467 8312.384706 1.079578233 1.037204897 1.06052094 1.200720852 1.032467684 0.963357656 0.890268894 1.076034202 1.065215432 1 13.02104671 -6.51389705 24.74182412 0.997042044 1.091561823 0.339976462 0.06277641 478.2972823 1317566.348 0.021658924 0.022799406 3.06E-07 6.51389705 0.094519779 VKPPPS(ph)PTTEGPSLQPDLAPEEAAGTQRPK ddPTM_A459_MK2206_30min_R2 3 VKPPPSPTTEGPSLQPDLAPEEAAGTQRPK 30 2 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 VKPPPS(0.753)PT(0.124)T(0.124)EGPSLQPDLAPEEAAGTQRPK;VKPPPS(0.324)PT(0.324)T(0.324)EGPS(0.027)LQPDLAPEEAAGTQRPK;VKPPPS(0.585)PT(0.205)T(0.205)EGPS(0.005)LQPDLAPEEAAGTQRPK 113.66 3.89E-12 89002000 255469 282694 258018 274057 288466 228461 281346 222791 217912 253902 TRUE FALSE 275027.9031 268655.827 266620.1913 251665.6664 277139.3754 237155.2434 244404.9322 251910.5487 236865.5919 245617.1985 1.11974204 1.093798922 1.085511084 1.024625588 1.128338639 0.965548198 0.995064408 1.025622595 0.964368917 1 17.90605206 -6.767064712 24.99993079 0.992031203 1.086665803 0.727177241 0.030658628 77.74605374 345514.6307 0.010636784 0.009638255 1.71E-07 6.767064712 0.0946346 VKPPPSPTT(ph)EGPSLQPDLAPEEAAGTQRPK ddPTM_A459_MK2206_30min_R2 1 VKPPPSPTTEGPSLQPDLAPEEAAGTQRPK 30 2 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 VKPPPS(0.296)PT(0.035)T(0.667)EGPS(0.002)LQPDLAPEEAAGTQRPK 89.723 1.68E-06 42554000 173200 203840 185860 198200 214160 161040 217660 157810 166020 167440 TRUE FALSE 186460.3252 193717.602 192056.4796 182006.426 205751.0023 167168.49 189080.9805 178436.3088 180460.1195 161976.4465 1.15115703 1.19596155 1.185706217 1.123659828 1.2702526 1.032054312 1.167336268 1.101618863 1.114113338 1 17.30542452 -9.033390655 0.285831553 0.964172924 1.192924026 0.45270327 0.055550049 3.250031507 0.568044695 0.228998175 0.080803754 9.26E-10 9.033390655 0.228751102 VKPYVNGT(ph)SPVYSR ddPTM_A459_MK2206_30min_R2 1 VKPYVNGTSPVYSR 14 1 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 VKPYVNGT(0.5)S(0.5)PVYSR 86.005 0.033057 29027000 79360 80256 79969 90568 100290 81766 100020 81817 87506 113860 TRUE FALSE 85435.86262 76270.60374 82635.12655 83168.30469 96352.11068 84877.66243 86887.25385 92510.76282 95117.11371 110144.7575 0.775668897 0.692457866 0.750241123 0.755081826 0.874777092 0.770601019 0.788846022 0.839901643 0.863564602 1 16.7490413 -14.52287875 0.091495477 1.729661755 0.610408519 0.784176094 0.038204544 94.12521753 0.594360186 13.1472896 0.877795678 3.00E-15 14.52287875 -1.119253236 VKPYVNGTS(ph)PVYSR ddPTM_A459_MK2206_30min_R1 1 VKPYVNGTSPVYSR 14 1 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 VKPYVNGT(0.135)S(0.863)PVYS(0.003)R 132.23 0.0039168 14732000 3466.9 3200.7 3101.4 2741.8 3278.1 2838.4 3272.4 2889.1 2544.8 3124.6 TRUE FALSE 3172.02195 2992.333848 2890.885609 2952.973911 3147.526336 2999.107755 3054.104167 2863.840903 2809.341067 3511.699038 0.903272722 0.852104299 0.823215651 0.840896068 0.896297291 0.854033254 0.869694166 0.815514334 0.799994828 1 11.77795349 -11.09503995 4.909503003 1.001186261 0.850494791 0.670503204 0.031428127 0.000428514 3.73E-05 0.031954409 0.007690452 8.03E-12 11.09503995 -0.15069147 VKS(ph)PGGPGSHVR ddPTM_A459_MK2206_30min_R2 2 VKSPGGPGSHVR 12 1 O75382-3;O75382-2;O75382;A0A1W2PPI7;O75382-4 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 VKS(0.999)PGGPGS(0.001)HVR;VKS(1)PGGPGSHVR 63.727 0.035788 13321400 47404 64263 53679 63563 59027 53315 60854 54138 48857 53057 TRUE FALSE 51033.28669 61071.79287 55468.63107 58369.69957 56709.30339 55343.93968 52863.7967 61214.02248 53106.49355 51325.75444 0.994301735 1.189885926 1.080717306 1.137239973 1.104889816 1.078287895 1.029966287 1.192657042 1.034694845 1 15.64739531 -6.756442228 6.209680902 1.076726832 1.107293661 0.049376468 0.066688942 0.559482585 85.01541794 0.021761447 0.020567471 1.75E-07 6.756442228 0.030566829 VKS(ph)PVSLTAHSLIGASPK ddPTM_A459_MK2206_30min_R2 1 VKSPVSLTAHSLIGASPK 18 1 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 VKS(0.775)PVS(0.195)LT(0.03)AHSLIGASPK 58.635 0.023905 3376800 35621 62451 40733 64076 70309 57104 73771 42934 62661 48147 TRUE FALSE 38348.17115 59349.77415 42091.01789 58840.78583 67548.31539 59277.13273 64084.77909 48545.62121 68111.14051 46575.96733 0.823346746 1.274257467 0.903706789 1.263329335 1.450282608 1.272697834 1.375919444 1.04228906 1.462366633 1 15.50729811 -4.020260394 0.755145474 1.267985003 3.08E-13 0.285251232 0.183289894 9.861316827 1.861635586 0.06764038 13.83796119 9.54E-05 4.020260394 -1.267985003 VKTPS(ph)FGISAPQVSIPDVNVNLK ddPTM_A459_MK2206_30min_R2 2 VKTPSFGISAPQVSIPDVNVNLK 23 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VKT(0.173)PS(0.827)FGIS(0.001)APQVSIPDVNVNLK;VKT(0.275)PS(0.543)FGIS(0.182)APQVSIPDVNVNLK 120.85 5.82E-06 4955800 30551 31532 27708 30065 30124 19604.2 22527 13429.3 20275.2 23048.1 TRUE FALSE 32890.00805 29966.16673 28631.77089 27608.59333 28941.1804 20350.25157 19569.17784 15184.55562 22038.70025 22296.04238 1.475150051 1.344012817 1.284163817 1.238273271 1.298041146 0.912729318 0.877697373 0.681042642 0.988457945 1 14.44450003 -6.773599027 3.798328249 0.863301693 1.326936823 0.825829744 0.09998688 0.087640462 2.744897991 0.036117427 0.033433965 1.68E-07 6.773599027 0.463635129 VKVDGPRS(ph)PSYGR ddPTM_A459_MK2206_30min_R1 1 VKVDGPRSPSYGR 13 2 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 1 VKVDGPRS(0.764)PS(0.236)YGR 89.502 0.025292 515530000 2296.2 2953.4 2973.2 3577.2 4367.2 3002.1 2111.1 3919.9 1257.4 333.32 TRUE FALSE 2100.896132 2761.133123 2771.387468 3852.716564 4193.245176 3172.076308 1970.272371 3885.628728 1388.11123 374.614198 5.60815939 7.370604578 7.397977659 10.28449158 11.19350307 8.467581646 5.259470627 10.37234773 3.705442124 1 8.549261769 -8.465365999 4.35804056 1.028813672 8.244341303 0.626801494 1.872712982 0.124750034 4.790953793 1.893703762 0.495065242 3.42E-09 8.465365999 7.215527631 VKVDGPRS(ph)PSYGR ddPTM_A459_MK2206_30min_R2 1 VKVDGPRSPSYGR 13 2 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 1 VKVDGPRS(0.818)PS(0.182)YGR 63.31 0.032371 119390000 27725 235670 146530 227340 352860 270110 208530 156710 390900 93181 TRUE FALSE 29847.64732 223966.9705 151415.2371 208765.5948 339004.9434 280389.2253 181149.7605 177192.5351 424899.7754 90140.5116 0.331123562 2.484642771 1.679769 2.316001885 3.760850004 3.110579476 2.00963759 1.965736958 4.713749322 1 16.45988802 -4.815248874 1.13723741 2.731897099 1.73E-13 0.270987983 1.038193299 2.246940349 2.516937959 0.31804365 7.283508889 1.53E-05 4.815248874 -2.731897099 VKVDPSHDASK ddPTM_A459_MK2206_30min_R2 2 VKVDPSHDASK 11 1 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 0 ; 77.387 0.039485 28296200 243490 284240 273370 272720 280670 226270 307690 254130 246010 267010 FALSE TRUE 262131.7816 270125.0549 282484.0194 250437.9036 269649.4855 234880.8634 267289.9334 287345.6636 267407.5051 258297.4856 1.014844496 1.045790494 1.093638286 0.969571589 1.043949324 0.909342431 1.034814307 1.112460166 1.035269486 1 17.97867407 -10.88689988 5.067310675 0.999982589 1.029076716 0.024534236 0.054564207 1.11E-05 1.40E-06 0.054752384 0.013271457 1.30E-11 10.88689988 0.029094127 VLAET(ph)PDSFEK ddPTM_A459_MK2206_30min_R1 2 VLAETPDSFEK 11 0 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 VLAET(0.947)PDS(0.053)FEK;VLAET(0.769)PDS(0.231)FEK 126.5 0.0073593 20782000 9207 8600.4 8752.7 6768.5 7934.4 7062.8 7825.8 7755.1 8008.3 7245.3 TRUE FALSE 8423.896302 8040.512397 8158.59111 7289.811043 7618.356047 7462.689632 7303.755161 7687.297978 8840.791443 8142.902463 1.034507823 0.987425851 1.001926665 0.89523497 0.935582378 0.916465556 0.896947396 0.944048883 1.085705187 1 12.99132741 -8.246325632 24.6102866 1.042852591 0.949000041 0.375379875 0.047037479 620.068904 1009686.668 0.03424355 0.012832128 5.67E-09 8.246325632 -0.09385255 VLAGDKNFITAEELR ddPTM_A459_MK2206_30min_R1 2 VLAGDKNFITAEELR 15 1 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 117.27 0.0060888 37855000 5365.1 6155.8 6573.2 5553.8 5076.2 4480.5 4396.8 5072.5 4892.6 4692.9 FALSE TRUE 4908.770072 5755.056301 6127.029498 5981.554638 4874.004205 4734.182038 4103.497494 5028.151667 5401.203278 5274.291882 0.930697463 1.091152411 1.161678124 1.134096249 0.924105892 0.897595762 0.778018659 0.953332083 1.024062263 1 12.3647617 -6.273862087 23.31449045 0.918014494 1.086121658 0.425580662 0.084534183 285.9602941 536678.7094 0.027625644 0.031589732 5.32E-07 6.273862087 0.168107164 VLAGDKNFITAEELRR ddPTM_A459_MK2206_30min_R1 2 VLAGDKNFITAEELRR 16 2 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 88.224 0.0089494 17179100 4248.7 4424 5091.2 6109 6750.4 4769 4652.6 6442.4 2740.3 1875.78 FALSE TRUE 3887.325754 4135.996796 4745.623529 6579.516239 6481.517274 5039.016659 4342.233543 6386.074776 3025.163991 2108.165788 1.843937406 1.961893519 2.251067519 3.120967182 3.074481766 2.390237375 2.059721094 3.029208999 1.434974426 1 11.04177261 -8.441509415 5.012231073 1.00811547 2.464957507 0.565171874 0.44552891 0.152263439 6.179747672 0.464341949 0.120866187 3.62E-09 8.441509415 1.456842036 VLAGETLS(ph)VNDPPDVLDR ddPTM_A459_MK2206_30min_R1 2 VLAGETLSVNDPPDVLDR 18 0 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3;K7EKJ9;K7EQR9 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 VLAGET(0.002)LS(0.998)VNDPPDVLDR;VLAGET(0.036)LS(0.964)VNDPPDVLDR 225.13 3.46E-15 8423200 1695.61 1647.34 1958.64 1530.1 2088.74 1582.44 1763.04 1941.93 1351.54 1472.72 TRUE FALSE 1551.389465 1540.097867 1825.692974 1647.948567 2005.541063 1672.036385 1645.430818 1924.951911 1492.03742 1655.171672 0.937298222 0.930476211 1.103023333 0.995636039 1.211681602 1.010189102 0.994114898 1.162992301 0.901439678 1 10.69276514 -5.2469453 23.96067382 1.053994456 0.93388717 0.214329722 0.086180861 636.6350356 1052435.287 0.020715907 0.054204457 5.66E-06 5.2469453 -0.120107286 VLAPILPDNFST(ph)PTGSR ddPTM_A459_MK2206_30min_R1 2 VLAPILPDNFSTPTGSR 17 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 VLAPILPDNFS(0.008)T(0.957)PT(0.034)GSR;VLAPILPDNFS(0.026)T(0.965)PT(0.009)GSR 260.25 7.67E-40 73702000 11730.2 10846.8 9012.2 8007.3 9712.3 9607 10626.6 8561.1 8140.6 7120.3 TRUE FALSE 10732.48489 10140.67135 8400.476973 8624.023633 9325.438525 10150.94004 9917.718903 8486.251205 8986.844501 8002.41652 1.341155495 1.267201142 1.049742531 1.077677426 1.165327811 1.26848434 1.239340502 1.060461073 1.123016339 1 12.96622001 -1.522881628 0.020350353 1.11E-06 2.653369357 0.352949971 0.087455552 4228.503015 6.655693921 320.2711138 583.9363298 0.029999801 1.522881628 2.653368246 VLAPILPDNFST(ph)PTGSR ddPTM_A459_MK2206_30min_R2 3 VLAPILPDNFSTPTGSR 17 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 VLAPILPDNFS(0.169)T(0.788)PT(0.043)GSR;VLAPILPDNFS(0.107)T(0.883)PT(0.01)GSR;VLAPILPDNFS(0.23)T(0.76)PT(0.01)GSR 174.4 5.89E-07 45008500 92324 98322 87338 100492 95311 103347 90441 64820.4 72242 96215 TRUE FALSE 99392.39643 93439.47245 90249.80533 92281.48214 91568.61124 107279.9425 78565.98806 73292.64884 78525.47858 93075.51243 1.067868377 1.003910374 0.969640703 0.991468967 0.983809907 1.152611892 0.844110185 0.787453616 0.843674953 1 16.50611403 -7.294401931 24.81084364 0.851097435 1.020761851 0.537788731 0.07144981 434.2095487 326826.8145 0.029253673 0.01972418 5.08E-08 7.294401931 0.169664416 VLAPILPDNFSTPTGS(ph)R ddPTM_A459_MK2206_30min_R2 1 VLAPILPDNFSTPTGSR 17 0 Q9NQS7-2;Q9NQS7 Q9NQS7-2 INCENP Inner centromere protein 1 VLAPILPDNFS(0.066)T(0.217)PT(0.004)GS(0.712)R 157.83 3.92E-05 1347400 17077 15799 13292 19605 17832 18917 19166 11880 14737 18271 TRUE FALSE 18384.42825 15014.44463 13735.14865 18003.20879 17131.82608 19636.89969 16649.48118 13432.75679 16018.79762 17674.81877 1.040148049 0.84948224 0.777102658 1.018579541 0.969278741 1.11100996 0.941988792 0.759994033 0.906306188 1 14.1094078 -12.25177708 1.9693238 2.965815823 0.927914915 0.036395972 0.106681571 5201733.068 174743.3977 46421549.34 0.028510289 5.60E-13 12.25177708 -2.037900909 VLAVNQENEHLMEDYEK ddPTM_A459_MK2206_30min_R1 4 VLAVNQENEHLMEDYEK 17 0 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ;;; 248.81 2.68E-30 39726300 16001 18107.4 17832.1 15387.4 16165.1 14901.4 16194.2 16585.5 13569.2 14043 FALSE TRUE 14640.03093 16928.60497 16621.70674 16572.54021 15521.20984 15745.10439 15113.91447 16440.49472 14979.7669 15782.75286 0.927596792 1.072601537 1.053156372 1.050041166 0.983428555 0.997614582 0.957622197 1.041674724 0.949122566 1 13.94606124 -6.273035599 24.17407894 0.989264966 1.031138965 0.147980813 0.04342887 839.8539298 1750797.535 0.013033987 0.014895921 5.33E-07 6.273035599 0.041873999 VLAVNQENEHLMEDYEK ddPTM_A459_MK2206_30min_R2 2 VLAVNQENEHLMEDYEK 17 0 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ; 104.44 0.003906 12322400 56543 64091 60550 62515 60231 54672 60155 50360 56614 57873 FALSE TRUE 60871.97555 60908.33414 62568.70678 57407.32452 57866.0283 56752.58127 52256.57624 56942.22491 61538.18339 55984.60875 1.087298401 1.08794784 1.117605502 1.025412623 1.033606014 1.013717565 0.933409689 1.01710499 1.09919824 1 15.77274264 -5.83859096 5.735752529 1.014398071 1.096434758 0.473221425 0.03872638 0.183605657 10.17030798 0.011624099 0.017602583 1.45E-06 5.83859096 0.082036687 VLCTRPS(ph)GNS(ph)AEEY(ph)YENVPCK ddPTM_A459_MK2206_30min_R2 1 VLCTRPSGNSAEEYYENVPCK 21 1 C9IY73;C9JY41;Q8N6F7-3;Q8N6F7;Q8N6F7-2 C9IY73 GCSAM Germinal center-associated signaling and motility protein 3 VLCT(0.375)RPS(0.625)GNS(1)AEEY(0.978)Y(0.022)ENVPCK 68.634 0.0093221 16833000 12188 30512 25657 64012 50129 53472 37754 35625 44340 17015 TRUE FALSE 13121.12265 28996.81845 26512.39157 58782.01484 48160.68358 55506.91443 32796.85445 40281.30982 48196.61305 16459.80194 0.797161636 1.761674809 1.610735759 3.571246789 2.92595766 3.372271101 1.992542472 2.447253616 2.928140522 1 14.00665936 -5.607458114 7.789582732 2.684226073 1.379538932 0.372617712 0.723640157 0.230746717 18.27284315 0.190853114 0.331784522 2.47E-06 5.607458114 -1.304687141 VLDDVSIRS(ph)PETK ddPTM_A459_MK2206_30min_R1 1 VLDDVSIRSPETK 13 1 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-2;F5GXF5 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 VLDDVS(0.01)IRS(0.987)PET(0.003)K 80.719 0.020076 25262000 15675 15731 15443 15337 13593 12516 12926 12605 13499 10769 TRUE FALSE 14341.75894 14706.90904 14394.77219 16518.2584 13051.56203 13224.6451 12063.73012 12494.79581 14902.26936 12103.14502 1.18496134 1.215131192 1.189341461 1.364790587 1.078361203 1.092661873 0.996743417 1.032359423 1.231272478 1 13.56309436 -6.384604355 9.381302429 1.070003112 1.233239775 0.525553925 0.077529314 0.2901824 20.89874935 0.023913745 0.027109784 4.12E-07 6.384604355 0.163236663 VLDDVSIRS(ph)PETK ddPTM_A459_MK2206_30min_R2 3 VLDDVSIRSPETK 13 1 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-2;F5GXF5 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 VLDDVS(0.001)IRS(0.839)PET(0.16)K;VLDDVSIRS(0.991)PET(0.009)K;VLDDVSIRS(0.993)PET(0.007)K 79.337 0.021606 75848100 398999 415861 422178 409641 425486 361944 488966 392997 327297 415005 TRUE FALSE 429546.6702 395209.9475 436253.2038 376172.0199 408779.2817 375718.0325 424764.1768 444363.0573 355764.7014 401463.4208 1.0699522 0.984423305 1.086657417 0.937001979 1.018222983 0.935871148 1.058039549 1.106858145 0.886169656 1 18.61490902 -2.01831364 1.235344671 1.003764567 75.76223285 0.077844328 0.066607837 5243.478187 9.102089203 0.019180325 1110397.979 0.00958708 2.01831364 74.75846828 VLDEEGS(ph)ER ddPTM_A459_MK2206_30min_R2 2 VLDEEGSER 9 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VLDEEGS(1)ER;VLDEEGS(1)ER 120.63 0.0065183 108263000 678200 286307 437990 358184 251697 304677 411990 260115 196614 495820 TRUE FALSE 730123.5134 272089.4107 452592.368 328919.2214 241814.1111 316271.6967 357895.2181 294112.9236 213715.1303 479641.434 1.522227776 0.567276702 0.943605652 0.68576065 0.504156009 0.659391942 0.746172438 0.613193321 0.445572703 1 18.87159677 -4.756927541 24.99991243 0.676489608 1.522229038 0.692216664 0.167391593 74.94643724 415223.7952 0.040443406 0.313609884 1.75E-05 4.756927541 0.84573943 VLDPFTIKPLDR ddPTM_A459_MK2206_30min_R1 1 VLDPFTIKPLDR 12 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 156.01 0.0012156 28958000 10443 12758 12001 13336 9750.2 9870.6 10209 9698.6 10490 9697.5 FALSE TRUE 9554.768012 11927.45188 11186.40556 14363.14103 9361.828888 10429.46484 9527.976237 9613.806163 11580.47304 10898.89951 0.876672732 1.094372131 1.026379365 1.317852414 0.858970108 0.95692825 0.874214523 0.882089623 1.062535995 1 13.41189485 VLDPFTIKPLDR ddPTM_A459_MK2206_30min_R2 3 VLDPFTIKPLDR 12 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ;; 149.23 0.0016394 16343600 106888 126986 110308 122609 114950 118280 127742 99503 102322 116269 FALSE TRUE 115071.4275 120680.0599 113985.6137 112591.4525 110436.4854 122781.2283 110969.322 112508.3837 111221.7826 112475.1521 1.023083102 1.072948626 1.013429292 1.00103401 0.981874515 1.091629805 0.986611887 1.000295458 0.988856477 1 16.77924679 -2.699394843 0.213174816 0.992809625 1.167571534 0.146341166 0.032680959 61.8699487 1.198346878 0.057322803 3.320937833 0.001998045 2.699394843 0.174761909 VLDSVEAGDT(ph)TPPTK ddPTM_A459_MK2206_30min_R2 1 VLDSVEAGDTTPPTK 15 0 Q8IZ21-3 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 VLDS(0.241)VEAGDT(0.692)T(0.066)PPTK 115.12 0.0056396 9852800 69915 76641 68199 73142 77906 67097 78622 65388 72879 79546 TRUE FALSE 75267.74616 72835.11939 70472.72062 67166.06463 74847.01899 69650.42335 68298.83696 73934.43611 79217.88368 76950.42053 0.978133006 0.946520095 0.915819824 0.872848571 0.972665496 0.905133758 0.887569379 0.960806135 1.029466547 1 16.23164159 -8.052182919 4.547728188 1.011935509 0.924761181 0.539576309 0.0326717 0.169670447 7.348968853 0.023508262 0.008722273 8.87E-09 8.052182919 -0.087174329 VLDSVEAGDTT(ph)PPTK ddPTM_A459_MK2206_30min_R1 2 VLDSVEAGDTTPPTK 15 0 Q8IZ21-3 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 VLDSVEAGDT(0.038)T(0.96)PPT(0.002)K;VLDSVEAGDT(0.014)T(0.986)PPTK 170.11 0.00012804 18105900 7678.3 8300.9 8107.5 7301.1 7904 7580.1 7861.9 7451.9 7304.6 7144.6 TRUE FALSE 7025.220265 7760.509901 7557.185489 7863.431987 7589.166943 8009.278711 7337.446996 7386.748824 8063.93931 8029.726987 0.87490151 0.966472448 0.941150988 0.97929008 0.94513387 0.997453428 0.913785364 0.919925277 1.004260708 1 12.97113522 -1.523003485 0.008449232 1.81223248 3.78E-05 0.246805708 0.035363351 30671.68312 20.12343877 1903.766565 2443.456869 0.029991385 1.523003485 -1.812194657 VLDSVEAGDTT(ph)PPTK ddPTM_A459_MK2206_30min_R2 1 VLDSVEAGDTTPPTK 15 0 Q8IZ21-3 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 VLDSVEAGDT(0.03)T(0.97)PPTK 178.67 4.63E-05 11672000 53070 63278 62533 71872 66571 61598 70813 60603 52712 65758 TRUE FALSE 57133.08 60135.70653 64617.81901 65999.82769 63957.08805 63942.15505 61515.16804 68524.02018 57296.79448 63612.32185 0.898144862 0.945346826 1.015806641 1.037532129 1.005419802 1.005185052 0.967032271 1.077213002 0.90071849 1 15.95701863 -5.028468655 3.041640941 1.004099093 0.900429983 0.369082385 0.043362803 0.257392142 4.531812855 0.010578908 0.048365206 9.37E-06 5.028468655 -0.10366911 VLDTSSLT(ph)QS(ph)APASPTNK ddPTM_A459_MK2206_30min_R2 1 VLDTSSLTQSAPASPTNK 18 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 2 VLDTSSLT(0.999)QS(1)APAS(0.001)PTNK 158.56 0.0030524 5150700 46390 45548 47466 46362 49444 46106 56768 41857 39618 54556 TRUE FALSE 49941.65407 43286.15255 49048.49275 42574.0763 47502.58012 47860.59614 49314.29341 47327.85362 43063.90203 52775.84219 0.946297624 0.82018876 0.929373947 0.806696294 0.900081896 0.906865607 0.934410355 0.896771168 0.815977543 1 15.68759008 -6.494449426 24.53253513 0.905566859 0.872750676 0.071809676 0.057962183 1666.026473 1437666.791 0.017121265 0.01937372 3.20E-07 6.494449426 -0.032816183 VLDTSSLT(ph)QSAPAS(ph)PTNK ddPTM_A459_MK2206_30min_R1 1 VLDTSSLTQSAPASPTNK 18 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 2 VLDT(0.004)S(0.008)S(0.005)LT(0.726)QS(0.257)APAS(0.67)PT(0.33)NK 180.62 2.22E-07 6224300 1299.3 918.31 991.16 1023.3 848.77 696.48 1315.8 999.59 1147.1 992.85 TRUE FALSE 1188.787712 858.5278521 923.8828207 1102.114743 814.9616936 735.9140957 1228.025383 990.85069 1266.34515 1115.851754 1.065363484 0.769392394 0.827961974 0.987689216 0.730349431 0.65950884 1.100527358 0.887976998 1.134868629 1 10.12392966 -7.282539154 24.99423613 1.021507997 0.838008575 0.352583423 0.126389936 995.9209598 1179736.635 0.052639479 0.035527389 5.22E-08 7.282539154 -0.183499422 VLDTSSLTQS(ph)APAS(ph)PTNK ddPTM_A459_MK2206_30min_R1 2 VLDTSSLTQSAPASPTNK 18 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 2 VLDTSS(0.002)LT(0.127)QS(0.883)APAS(0.495)PT(0.495)NK;VLDTS(0.002)S(0.012)LT(0.124)QS(0.86)APAS(0.726)PT(0.277)NK 126.07 0.014462 13649200 2591.6 2386.8 2735.9 2291.5 2869.5 2099.6 2164.1 2985.2 1845.17 2181.7 TRUE FALSE 2371.170811 2231.418886 2550.194731 2467.991727 2755.201739 2218.477538 2019.736838 2959.100711 2036.982025 2451.985467 0.967041136 0.910045723 1.040052955 1.006527877 1.123661529 0.904767817 0.823714849 1.20681821 0.830748001 1 11.25973471 -5.251117494 24.34128928 0.995513 0.938543439 0.033395691 0.113893918 1931.855559 4555708.394 0.028144582 0.072638001 5.61E-06 5.251117494 -0.056969562 VLDTSSLTQS(ph)APAS(ph)PTNK ddPTM_A459_MK2206_30min_R2 1 VLDTSSLTQSAPASPTNK 18 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 2 VLDTSSLT(0.019)QS(0.981)APAS(0.997)PT(0.003)NK 139.46 0.0059368 5975100 41458 50316 41496 47161 47469 40862 56169 40343 39013 47889 TRUE FALSE 44632.05636 47817.38061 42879.45593 43307.79544 45605.12855 42417.03204 48793.94283 45615.96862 42406.28022 46326.38585 0.963426253 1.032184569 0.925594672 0.934840796 0.984430961 0.915612804 1.053264612 0.984664955 0.915380715 1 15.49954651 -7.223436593 24.99984308 0.987049823 0.961150979 0.093372619 0.043951527 1646.864396 1083378.356 0.017060434 0.013214661 5.98E-08 7.223436593 -0.025898844 VLDTSSLTQS(ph)APASPTNK ddPTM_A459_MK2206_30min_R2 1 VLDTSSLTQSAPASPTNK 18 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 1 VLDTSSLT(0.006)QS(0.91)APAS(0.084)PTNK 280.31 5.52E-67 38488000 31203 35906 34909 34687 33705 27937 41212 32893 30718 34456 TRUE FALSE 33591.92567 34122.96025 36072.84864 31852.96114 32381.57235 29000.16211 35800.8149 37192.22804 33389.79611 33331.70354 1.007807046 1.023738862 1.082238374 0.955635559 0.97149467 0.870047403 1.074076963 1.115821398 1.001742862 1 15.02460743 -8.491277364 24.88915382 0.999999334 1.012418015 0.004934699 0.066848148 6663.064329 5247818.172 0.069571068 0.017963173 3.23E-09 8.491277364 0.012418681 VLDTSSLTQSAPAS(ph)PTNK ddPTM_A459_MK2206_30min_R1 2 VLDTSSLTQSAPASPTNK 18 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 1 VLDTSSLTQS(0.015)APAS(0.492)PT(0.492)NK;VLDTSS(0.007)LT(0.028)QS(0.473)APAS(0.491)PTNK 243.61 2.19E-25 105712000 6456.8 6339.4 6181.1 6138 5474.4 5183.2 6790.9 5954.2 6362.2 5468.5 TRUE FALSE 5907.615254 5926.703908 5761.544154 6610.749824 5256.343056 5476.668305 6337.891452 5902.143057 7023.573457 6145.979065 0.9612163 0.964322176 0.937449362 1.075621923 0.855249099 0.891097781 1.031225682 0.960325929 1.142791634 1 12.58542714 -8.232951575 23.4019124 1.071395779 0.959482999 0.308352733 0.066995408 334.156733 274501.2985 0.04474431 0.016900458 5.85E-09 8.232951575 -0.11191278 VLDTSSLTQSAPAS(ph)PTNK ddPTM_A459_MK2206_30min_R2 4 VLDTSSLTQSAPASPTNK 18 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 1 VLDTSSLTQS(0.008)APAS(0.951)PT(0.04)NK;VLDTSSLTQSAPAS(0.927)PT(0.073)NK;VLDTSSLTQSAPAS(0.999)PT(0.001)NK;VLDTSSLTQS(0.001)APAS(0.995)PT(0.003)NK 189.84 2.23E-10 91645800 163475 182900 175752 189324 181304 163823 209342 163256 194283 200921 TRUE FALSE 175990.7717 173817.452 181611.484 173855.6236 174185.094 170057.3991 181855.1439 184594.1197 211181.3842 194364.9642 0.905465511 0.894283868 0.934383852 0.894480259 0.896175371 0.874938545 0.935637473 0.949729394 1.086519811 1 17.56840866 -8.010800101 2.70919144 1.041952942 0.903456632 0.799015756 0.027137157 0.110762043 1.550938851 0.019884865 0.006985037 9.75E-09 8.010800101 -0.13849631 VLEDDPEATY(ph)TTSGGK ddPTM_A459_MK2206_30min_R2 1 VLEDDPEATYTTSGGK 16 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 VLEDDPEAT(0.212)Y(0.505)T(0.212)T(0.055)S(0.014)GGK 128.36 0.013427 1479000 16596 14281 11272 8998.1 10391 9533.1 15692 9496.2 8801.8 10685 TRUE FALSE 17866.60252 13571.82631 11647.80285 8262.926447 9982.997129 9895.888801 13631.62155 10737.38595 9567.364654 10336.34933 1.728521546 1.313019315 1.126877826 0.799404721 0.965814604 0.957387225 1.318804263 1.038798671 0.925603843 1 13.33543911 -4.861203706 1.759124219 1.012918039 1.894161993 0.756159554 0.126748495 0.392747604 1.412214964 0.037954703 0.556718073 1.38E-05 4.861203706 0.881243953 VLENGEDHGVAGSPAS(ph)PASIEEER ddPTM_A459_MK2206_30min_R1 1 VLENGEDHGVAGSPASPASIEEER 24 0 H0Y7I6;E9PI60;Q9ULD4 H0Y7I6 BRPF3 Bromodomain and PHD finger-containing protein 3 1 VLENGEDHGVAGS(0.108)PAS(0.833)PAS(0.06)IEEER 88.295 5.06E-05 2576800 852.35 696.29 696.4 657.74 850.74 671.62 1124.7 702.42 755.44 712.17 TRUE FALSE 779.8531566 650.9613944 649.1303083 708.3992488 816.8532243 709.646544 1049.673315 696.278816 833.9706914 800.3989962 0.974330503 0.813296115 0.811008399 0.885057643 1.020557532 0.886615984 1.311437571 0.869914654 1.0419437 1 9.644575548 -6.357834127 1.802167126 1.033686577 0.857857718 0.271027978 0.120295683 0.460172481 2.957462482 0.042765674 0.052607547 4.39E-07 6.357834127 -0.175828859 VLENGEDHGVAGSPAS(ph)PASIEEER ddPTM_A459_MK2206_30min_R2 1 VLENGEDHGVAGSPASPASIEEER 24 0 H0Y7I6;E9PI60;Q9ULD4 H0Y7I6 BRPF3 Bromodomain and PHD finger-containing protein 3 1 VLENGEDHGVAGS(0.009)PAS(0.704)PAS(0.287)IEEER 80.608 0.0001614 3127400 7563.8 8812 6816.9 10680 9586.5 9964.2 9973.1 7770.6 7848.2 8501.4 TRUE FALSE 8142.890344 8374.408894 7044.172044 9807.409836 9210.085842 10343.39461 8663.61999 8786.2441 8530.82225 8224.000014 0.990137443 1.018289017 0.856538428 1.192535241 1.119903432 1.257708487 1.053455736 1.068366256 1.037308151 1 13.00562455 -5.767072469 24.99999773 1.111969405 0.961318367 0.410714904 0.08141579 132.0482834 586041.3064 0.023245321 0.035580463 1.71E-06 5.767072469 -0.150651039 VLEPYPS(ph)K ddPTM_A459_MK2206_30min_R1 1 VLEPYPSK 8 0 A0A6I8PTV8;A0A6I8PIP7;A0A6I8PS05;A0A6I8PLB8;A0A6I8PRS0;A0A6I8PL42;B4DER1;A0A6I8PIT3;A0A6I8PIV1;Q9P2J5-2;Q9P2J5;A0A6I8PRU9 A0A6I8PTV8 LARS "Leucine--tRNA ligase, cytoplasmic" 1 VLEPY(0.01)PS(0.99)K 94.262 0.022908 13139000 3211.2 3454.2 3440.7 3285.8 3494.7 3030.7 3220.1 3104 2334.8 2379.7 TRUE FALSE 2938.070577 3229.330952 3207.15487 3538.872885 3355.498699 3202.295615 3005.293004 3076.862055 2577.510815 2674.515202 1.098543233 1.207445353 1.199153726 1.323182939 1.254619415 1.197336853 1.123677668 1.150437303 0.963730105 1 11.38506169 -7.970364643 1.299900697 0.979333025 1.217695165 0.669519096 0.060128391 0.2752831 0.836782365 0.056454048 0.019536119 1.07E-08 7.970364643 0.238362139 VLEQLTGQT(ph)PVFSK ddPTM_A459_MK2206_30min_R2 2 VLEQLTGQTPVFSK 14 0 P62913;Q5VVC8;P62913-2 P62913 RPL11 60S ribosomal protein L11 1 VLEQLTGQT(0.517)PVFS(0.482)K;VLEQLT(0.056)GQT(0.887)PVFS(0.056)K 146.1 0.0011792 5906500 43255 48153 40741 47040 41172 45649 59474 48706 33205 53030 TRUE FALSE 46566.63606 45761.79204 42099.28461 43196.68153 39555.38041 47386.20468 51664.99236 55072.04143 36093.11088 51299.63544 0.907738148 0.892049069 0.820654655 0.842046559 0.771065526 0.923714258 1.007122018 1.073536702 0.703574413 1 15.64666095 -6.981342114 21.4154432 0.954076605 0.847509392 0.193878169 0.097031339 71.35015567 81893.16617 0.033628864 0.029645972 1.04E-07 6.981342114 -0.106567213 VLEQLTGQTPVFS(ph)K ddPTM_A459_MK2206_30min_R2 1 VLEQLTGQTPVFSK 14 0 P62913;Q5VVC8;P62913-2 P62913 RPL11 60S ribosomal protein L11 1 VLEQLT(0.008)GQT(0.079)PVFS(0.913)K 139.34 0.0005714 4945200 26641 30179 20401 28552 23867 18813 37379 28417 17792 29703 TRUE FALSE 28680.65544 28680.35474 21081.15916 26219.21027 22929.86166 19528.9419 32471.0924 32131.19947 19339.516 28733.79354 0.998150676 0.998140211 0.733671282 0.912486902 0.798010246 0.679650665 1.130066322 1.118237292 0.673058222 1 14.81046085 -7.270658886 24.99926346 0.990193551 0.854665388 0.142962613 0.151534324 1357.229405 3680197.635 0.063937197 0.043762027 5.36E-08 7.270658886 -0.135528163 VLETAEDIQER ddPTM_A459_MK2206_30min_R2 1 VLETAEDIQER 11 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2;A0A0D9SFF6;A0A1B0GTB7 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 0 143.5 0.011552 1891500 9647.5 10743 9149.4 10319 11777 12418 12161 7483.7 11365 10058 FALSE TRUE 10386.12002 10209.51824 9454.436429 9475.904691 11314.57581 12890.57569 10564.24609 8461.845285 12353.50716 9729.808284 1.067453717 1.049303125 0.971698121 0.973904564 1.162877569 1.324854028 1.085760971 0.869682633 1.269655763 1 13.24819566 -6.261118456 24.99829118 1.120939526 1.014862844 0.143894734 0.123265194 62.8112477 4892752.929 0.038884849 0.047213862 5.48E-07 6.261118456 -0.106076682 VLFAT(ph)ET(ph)FAMGVNMPAR ddPTM_A459_MK2206_30min_R1 1 VLFATETFAMGVNMPAR 17 0 Q15477 Q15477 SKIV2L Helicase SKI2W 2 VLFAT(1)ET(1)FAMGVNMPAR 82.942 0.018748 0 1475.4 575.65 690.29 458.52 2165.4 2351 2334.5 1666.5 687.95 672.35 TRUE FALSE 1349.909482 538.1750804 643.4350381 493.8352898 2079.147533 2484.111588 2178.769765 1651.929966 759.4648644 755.645794 1.786431544 0.712205487 0.8515035 0.653527478 2.751484292 3.287402124 2.8833215 2.186116801 1.005054048 1 9.561566325 -4.441574573 19.50892378 1.767760844 2.506778635 0 0.951994628 10894.81225 4591703.901 0.261002222 266670.6785 3.62E-05 4.441574573 0.739017791 VLGAGGAGPAPAT(ph)PSR ddPTM_A459_MK2206_30min_R1 1 VLGAGGAGPAPATPSR 16 0 B7WPE2;Q32P44;H7C355;G3V195 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 VLGAGGAGPAPAT(0.977)PS(0.023)R 92.269 0.025549 4161000 1489.5 1278.1 1391.7 1034.4 1442.2 1339.1 1370.8 1341.5 1190.9 1204.9 TRUE FALSE 1362.810203 1194.895458 1297.235281 1114.069667 1384.75412 1414.918685 1279.356433 1329.771407 1314.698317 1354.172109 1.006378875 0.882380792 0.957954512 0.822694294 1.022583549 1.04485883 0.944751723 0.981981093 0.97085024 1 10.40319539 -6.307853215 24.99997139 0.993333404 0.917754087 0.349875442 0.051290849 478.0288728 257480.3495 0.015581873 0.01766825 4.92E-07 6.307853215 -0.075579317 VLGAGGAGPAPAT(ph)PSR ddPTM_A459_MK2206_30min_R2 1 VLGAGGAGPAPATPSR 16 0 B7WPE2;Q32P44;H7C355;G3V195 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 VLGAGGAGPAPAT(0.88)PS(0.12)R 91.592 0.026796 8120500 34471 29540 27492 25534 27068 22755 34269 31543 27962 30759 TRUE FALSE 37110.12626 28073.08656 28408.56956 23447.79052 26005.17431 23620.95747 29769.43914 35665.7784 30394.08422 29755.33635 1.247175492 0.943463929 0.954738647 0.788019676 0.87396674 0.79383937 1.000473958 1.198634691 1.021466666 1 14.86086081 -7.524645436 24.94403403 1.085941302 0.923254742 0.185899303 0.129627603 86.6499332 1223349.798 0.062143893 0.036200459 2.99E-08 7.524645436 -0.16268656 VLGAGGAGPAPATPS(ph)R ddPTM_A459_MK2206_30min_R2 1 VLGAGGAGPAPATPSR 16 0 B7WPE2;Q32P44;H7C355;G3V195 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 VLGAGGAGPAPAT(0.185)PS(0.815)R 102.05 0.0051496 8486900 66621 56830 44455 46984 64341 48998 50232 55128 38807 69759 TRUE FALSE 71721.55498 54007.90484 45937.10751 43145.25691 61814.64905 50862.65322 43636.47806 62333.41888 42182.36271 67482.76954 1.062812855 0.800321404 0.680723507 0.639352196 0.916006404 0.753713186 0.646631405 0.923693845 0.625083455 1 16.04223156 -4.770615141 4.36619812 0.764094533 1.087118894 0.31583824 0.126498317 0.228870433 9.223118605 0.029756715 0.231747978 1.70E-05 4.770615141 0.323024361 VLGS(ph)EGEEEDEALS(ph)PAK ddPTM_A459_MK2206_30min_R1 2 VLGSEGEEEDEALSPAK 17 0 P18858-3;P18858;M0R0Q7;P18858-2;B4E135;F5GZ28;M0QY71;M0R1G7 P18858-3 LIG1 DNA ligase 1;DNA ligase 2 VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK 137.85 0.0024923 34651300 9627 10876.9 10555.1 9008.1 7291 6481.1 8171.8 8194.6 9760.4 8974.4 TRUE FALSE 8808.173097 10168.81183 9838.64922 9701.905423 7000.584031 6848.054281 7626.674132 8122.955476 10775.02851 10086.21643 0.873288132 1.008188939 0.975454899 0.961897407 0.694074342 0.678951749 0.756148174 0.80535209 1.068292415 1 13.30009747 -6.22201538 23.56541436 0.812445416 0.960009544 0.181082781 0.120735397 402.5952475 240647.5823 0.036700693 0.047379092 6.00E-07 6.22201538 0.147564128 VLGS(ph)EGEEEDEALS(ph)PAK ddPTM_A459_MK2206_30min_R2 2 VLGSEGEEEDEALSPAK 17 0 P18858-3;P18858;M0R0Q7;P18858-2;B4E135;F5GZ28;M0QY71;M0R1G7 P18858-3 LIG1 DNA ligase 1;DNA ligase 2 VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK 195.55 1.71E-06 12007600 41472 39066 43206 41163 38367 30779.3 44571 35393 31342 42541 TRUE FALSE 44647.12821 37126.03925 44646.46648 37799.85123 36860.5188 31950.62783 38718.77416 40018.98662 34068.07051 41152.89065 1.084908678 0.902149002 1.084892598 0.918522384 0.895696954 0.776388422 0.940851871 0.972446552 0.827841495 1 15.32870615 -5.914155614 7.565141571 0.897419948 1.011402361 0.328995399 0.077646289 0.281604072 21.33038806 0.021345787 0.031792014 1.22E-06 5.914155614 0.113982413 VLGS(ph)EGEEEDEALSPAK ddPTM_A459_MK2206_30min_R1 10 VLGSEGEEEDEALSPAK 17 0 P18858-3;P18858;M0R0Q7;P18858-2;B4E135;F5GZ28;M0QY71;M0R1G7 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(0.995)EGEEEDEALS(0.005)PAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK 324.83 4.93E-119 242170340 35074.15 38348.34 38071.73 32050.69 35031.65 31020.74 34784.64 35856.02 32859.64 29708.57 TRUE FALSE 32090.90936 35851.8561 35487.52704 34519.2397 33636.2652 32777.10749 32464.22013 35542.5346 36275.51717 33389.09194 0.96111956 1.073759543 1.062847924 1.033847814 1.007402815 0.981671126 0.972300181 1.064495395 1.08644815 1 15.02708924 -11.25212107 2.902997123 0.995534375 1.027294186 0.034969577 0.042696277 20343836.01 385159.3244 606406.6204 0.010876859 5.60E-12 11.25212107 0.03175981 VLGS(ph)EGEEEDEALSPAK ddPTM_A459_MK2206_30min_R2 5 VLGSEGEEEDEALSPAK 17 0 P18858-3;P18858;M0R0Q7;P18858-2;B4E135;F5GZ28;M0QY71;M0R1G7 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK 228.99 2.60E-16 54329200 199356.3 223157.7 219388 244499 236358 193534 239782 192415 185131.2 235708 TRUE FALSE 214619.1716 212076.0131 226702.2864 224522.6496 227077.3973 200899.072 208298.3354 217564.3012 201233.5771 228016.8673 0.941242524 0.930089145 0.994234721 0.984675618 0.995879823 0.8810711 0.913521609 0.954158803 0.882538119 1 17.79878102 -6.749917371 24.99998523 0.922596826 0.969298051 0.241459275 0.03779975 306.3912956 664794.6141 0.012415445 0.01231097 1.78E-07 6.749917371 0.046701225 VLGSEGEEEDEALS(ph)PAK ddPTM_A459_MK2206_30min_R1 5 VLGSEGEEEDEALSPAK 17 0 P18858-3;P18858;M0R0Q7;P18858-2;B4E135;F5GZ28;M0QY71;M0R1G7 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK 318.32 1.78E-118 316539400 20493.9 22956.4 23475 19047.4 15643.2 14545.7 17322.8 18055.6 20253.5 18174 TRUE FALSE 18750.78619 21461.93419 21881.58241 20514.43405 15020.09822 15369.26496 16167.22762 17897.74179 22358.9238 20425.53233 0.918007222 1.050740507 1.071285784 1.00435248 0.73535896 0.752453582 0.791520503 0.876243591 1.094655622 1 14.31808606 -6.116575751 8.461359132 0.858730605 1.020431242 0.261014725 0.109985484 0.385653871 25.6877047 0.034020482 0.044014823 7.65E-07 6.116575751 0.161700637 VLGSEGEEEDEALS(ph)PAK ddPTM_A459_MK2206_30min_R2 6 VLGSEGEEEDEALSPAK 17 0 P18858-3;P18858;M0R0Q7;P18858-2;B4E135;F5GZ28;M0QY71;M0R1G7 P18858-3 LIG1 DNA ligase 1;DNA ligase 1 VLGS(0.005)EGEEEDEALS(0.995)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK 262.82 1.94E-40 178468100 225501 231547 247131 230115 219647 171422 247952 187825 171201 241263 TRUE FALSE 242765.5299 220048.7127 255370.2242 211313.8684 211022.5551 177945.5843 215395.6046 212374.3724 186091.7535 233390.6081 1.040168377 0.94283448 1.094175238 0.90540862 0.904160441 0.762436783 0.922897482 0.909952522 0.797340369 1 17.83238698 -5.910232018 6.515899222 0.876936983 1.016853795 0.447086544 0.071133021 0.189786759 11.40252338 0.019365392 0.028938318 1.23E-06 5.910232018 0.139916812 VLGT(ph)SPEAIDSAENR ddPTM_A459_MK2206_30min_R1 2 VLGTSPEAIDSAENR 15 0 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 VLGT(0.638)S(0.362)PEAIDSAENR;VLGT(0.625)S(0.375)PEAIDSAENR 214.89 5.26E-07 10829100 3781.4 3052.8 3252 2840.7 4023.9 3538.4 3883.5 3557.5 2818.8 2468.3 TRUE FALSE 3459.772073 2854.062165 3031.263301 3059.491206 3863.619542 3738.74115 3624.438801 3526.397153 3111.824347 2774.091639 1.247172957 1.028827644 1.092704819 1.102880368 1.39275123 1.347735272 1.306531749 1.271189857 1.121745332 1 11.43779973 -6.221424296 24.49662061 1.26226588 1.109734914 0.187836641 0.118605306 554.2005676 339272.7235 0.034321745 0.044308508 6.01E-07 6.221424296 -0.152530966 VLGT(ph)SPEAIDSAENR ddPTM_A459_MK2206_30min_R2 1 VLGTSPEAIDSAENR 15 0 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 VLGT(0.608)S(0.392)PEAIDSAENR 148.18 0.00072416 5213900 11192 16512 13562 15180 15432 11507 12020 8026 10797 12188 TRUE FALSE 12048.86813 15692.03809 14014.15031 13939.74544 14826.06214 11944.90695 10441.75956 9075.025757 11736.10354 11790.30656 1.021930012 1.330927064 1.188616279 1.182305598 1.257478936 1.0131125 0.885622398 0.769702273 0.995402748 1 13.52531361 -6.951914442 3.592478924 0.896981011 1.202005688 0.664718458 0.095109513 0.12775982 3.426824445 0.034684178 0.02935958 1.12E-07 6.951914442 0.305024678 VLGTS(ph)PEAIDSAENR ddPTM_A459_MK2206_30min_R2 2 VLGTSPEAIDSAENR 15 0 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 VLGT(0.142)S(0.772)PEAIDS(0.086)AENR;VLGT(0.058)S(0.942)PEAIDSAENR 147.83 0.00031645 5727200 18131 23440 21159.8 21963.4 26480.7 24352.5 25729.7 19858.2 24551.2 25273.6 TRUE FALSE 19519.1233 22276.00368 21865.25717 20168.91996 25440.93466 25279.25145 22351.35948 22453.73492 26686.619 24448.9245 0.798363269 0.911124074 0.894323886 0.824940989 1.040574798 1.033961696 0.914206246 0.918393565 1.091525273 1 14.57748338 -6.259101785 24.99975427 0.993127313 0.863693184 0.584209241 0.058668081 173.0489996 1850694.017 0.018179856 0.022354904 5.51E-07 6.259101785 -0.129434128 VLIAAHGNSLR ddPTM_A459_MK2206_30min_R1 2 VLIAAHGNSLR 11 0 P18669;P15259 P18669 PGAM1;PGAM2 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 0 ; 128.51 0.0038804 23542000 7065.4 4858 5741.7 4534.2 8005.8 7274.8 8149 7020.4 5009.1 4609.2 FALSE TRUE 6464.450628 4541.743317 5351.969401 4883.42487 7686.912033 7686.692889 7605.395079 6959.021383 5529.81387 5180.222494 1.247909841 0.876746766 1.03315435 0.942705622 1.483896115 1.483853811 1.468159927 1.34338272 1.067485784 1 12.33879835 -6.253823384 24.71636524 1.341786578 1.01510362 0.360388956 0.180919507 491.847161 1596201.522 0.053564455 0.067783223 5.57E-07 6.253823384 -0.326682958 VLIAAHGNSLR ddPTM_A459_MK2206_30min_R2 1 VLIAAHGNSLR 11 0 P18669;P15259 P18669 PGAM1;PGAM2 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 0 136.49 0.0019828 22232000 42538 55780 57043 75909 66987 73934 74288 61523 66407 61542 FALSE TRUE 45794.74199 53010.04631 58944.78515 69706.99188 64356.7538 76747.61018 64533.89636 69564.26734 72182.96082 59533.88958 0.769221402 0.89041799 0.990104721 1.170879181 1.0810104 1.289141541 1.083985891 1.168481815 1.212468416 1 15.86142353 -5.295316551 1.364167441 1.155923357 0.754763158 0.728227699 0.077730038 0.286295027 0.843987732 0.022631078 0.122056987 5.07E-06 5.295316551 -0.401160199 VLIGGDET(ph)PEGQR ddPTM_A459_MK2206_30min_R2 1 VLIGGDETPEGQR 13 0 O60701;O60701-2;O60701-3 O60701 UGDH UDP-glucose 6-dehydrogenase 1 VLIGGDET(1)PEGQR 110.55 0.012992 2667700 19522 21098 17398 20808 15559 17818 21388 13400 14147 16723 TRUE FALSE 21016.61933 20050.304 17978.04064 19107.91984 14948.07548 18496.07648 18579.72991 15151.42601 15377.48049 16177.32988 1.299140185 1.239407501 1.111310752 1.18115412 0.924013765 1.143333085 1.148504113 0.936583857 0.950557391 1 13.98168589 -1.52287875 0.281960397 0.97696689 3.570656432 0.608817478 0.079016648 36.89889165 0.520884816 0.090227299 47.26047914 0.03 1.52287875 2.593689542 VLIGGDETPEGQR ddPTM_A459_MK2206_30min_R2 1 VLIGGDETPEGQR 13 0 O60701;O60701-2;O60701-3 O60701 UGDH UDP-glucose 6-dehydrogenase 0 155.11 0.0050762 8082100 29165 21835 27988 23440 18066 26544 21303 16311 16830 23368 FALSE TRUE 31397.89482 20750.70565 28921.10595 21524.87702 17356.63807 27554.15052 18505.89051 18442.9037 18293.84298 22605.50407 1.388949113 0.917949256 1.279383369 0.952196286 0.767805841 1.218913342 0.818645337 0.815858989 0.809264988 1 14.46438647 -1.522878745 0.390011623 0.875700221 7.370722426 0.383024816 0.165374699 76.49437033 1.030135225 0.121397612 378.6753618 0.03 1.522878745 6.495022205 VLISVGS(ph)YK ddPTM_A459_MK2206_30min_R1 1 VLISVGSYK 9 0 Q8TEV9-2;Q8TEV9 Q8TEV9-2 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein 1 VLISVGS(1)YK 118.23 0.0072794 10216000 1589.8 2554.1 2823.3 3081.6 3585.2 5460.8 6646.4 7234.3 7233.5 6940.4 TRUE FALSE 1454.579162 2387.827626 2631.662262 3318.945366 3442.393892 5769.985777 6203.030783 7171.051278 7985.44821 7800.229149 0.186479029 0.306122754 0.337382686 0.425493316 0.441319585 0.739720035 0.795236994 0.91933854 1.023745336 1 12.92930079 -6.870902226 0.691854102 1.033863288 0.234545657 0.974800909 0.047039229 0.100035711 0.103294612 0.035774491 0.032957861 1.35E-07 6.870902226 -0.799317631 down VLISVGS(ph)YK ddPTM_A459_MK2206_30min_R2 2 VLISVGSYK 9 0 Q8TEV9-2;Q8TEV9 Q8TEV9-2 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein 1 VLISVGS(1)YK;VLIS(0.408)VGS(0.592)YK 117.14 0.0076278 11000400 30309 52714 63360 71733 100746 102546 160073 119810 128615 172442 TRUE FALSE 32629.48034 50096.29941 65472.39078 65872.18444 96790.20583 106448.4599 139055.2228 135469.5784 139801.7002 166815.2317 0.195602524 0.300310103 0.392484488 0.394881114 0.580224029 0.638121944 0.833588285 0.812093578 0.83806316 1 17.3478915 -6.419587238 0.415951896 0.988312808 0.09631341 0.977569846 0.038374619 0.22136555 0.0721893 0.038504762 0.084448001 3.81E-07 6.419587238 -0.891999398 down VLLQAS(ph)QDENFGNTTPR ddPTM_A459_MK2206_30min_R2 2 VLLQASQDENFGNTTPR 17 0 P57740;G3V1T4 P57740 NUP107 Nuclear pore complex protein Nup107 1 VLLQAS(1)QDENFGNTTPR;VLLQAS(0.986)QDENFGNT(0.013)T(0.001)PR 164.58 5.17E-06 6729000 22482 32479 19991.6 21488 26049 27680 26694 18243.8 24231 19335.5 TRUE FALSE 24203.23921 30866.14009 20658.10997 19732.36166 25026.18537 28733.3818 23189.04573 20628.3273 26338.56858 18704.58422 1.293973655 1.65019119 1.104441014 1.05494789 1.337970686 1.536167897 1.239752002 1.102848749 1.408134406 1 14.19110428 -13.83758795 0.206033644 5.30E-11 1.346637779 0.19470921 0.182809626 190.6055562 2.440688989 79.5437336 0.436649441 1.45E-14 13.83758795 1.346637779 VLLQASQDENFGNT(ph)TPR ddPTM_A459_MK2206_30min_R1 2 VLLQASQDENFGNTTPR 17 0 P57740;G3V1T4 P57740 NUP107 Nuclear pore complex protein Nup107 1 VLLQASQDENFGNT(0.5)T(0.5)PR;VLLQAS(0.005)QDENFGNT(0.498)T(0.498)PR 134.76 0.0012355 33828000 5399.9 5001.2 4517.2 4477 4881.1 4977.5 5518.5 4384.8 4611.1 4193.1 TRUE FALSE 4940.610149 4675.620971 4210.58505 4821.819316 4686.675451 5259.321749 5150.370934 4346.464156 5090.440346 4712.572884 1.048389122 0.992158866 0.89347903 1.023181908 0.994504608 1.116019185 1.092900006 0.922312347 1.080182837 1 12.20229922 -6.308449362 2.662207312 1.040056147 0.980321875 0.124001109 0.063625033 0.577707952 8.089128226 0.02157541 0.026320205 4.92E-07 6.308449362 -0.059734272 VLLS(ph)DSNLHDA ddPTM_A459_MK2206_30min_R1 1 VLLSDSNLHDA 11 0 H3BV90;Q6FI81-3;Q6FI81;Q6FI81-2 H3BV90 CIAPIN1 Anamorsin 1 VLLS(0.908)DS(0.092)NLHDA 107.09 0.010744 6350300 3464.2 3289.8 3420.1 2804.4 3685.7 3137.2 3683.2 3373.4 3145.3 2809.4 TRUE FALSE 3169.551599 3075.633422 3187.953141 3020.395374 3538.890764 3314.825553 3437.500448 3343.906719 3472.265191 3157.449682 1.003832814 0.974087866 1.00966079 0.956593352 1.120806702 1.049842717 1.088695243 1.059053051 1.09970563 1 11.62454403 -6.254063575 24.99922835 1.072595052 0.98687665 0.599578994 0.033431905 362.6655074 1229203.284 0.009120828 0.011535096 5.57E-07 6.254063575 -0.085718402 VLLS(ph)DSNLHDA ddPTM_A459_MK2206_30min_R2 2 VLLSDSNLHDA 11 0 H3BV90;Q6FI81-3;Q6FI81;Q6FI81-2 H3BV90 CIAPIN1 Anamorsin 1 VLLS(0.599)DS(0.401)NLHDA;VLLS(0.832)DS(0.168)NLHDA 91.093 0.026903 9800800 45057 55873 55096 72264 58013 68481 74909 52249 54751 62154 TRUE FALSE 48506.59856 53098.42807 56932.87314 66359.80004 55735.11813 71087.09244 65073.35832 59078.1237 59513.14301 60125.92007 0.806750209 0.883120425 0.946894003 1.103680409 0.926973227 1.182303611 1.082284616 0.9825733 0.989808438 1 15.87569945 -5.293043251 1.799811811 1.041194519 0.813323927 0.550766143 0.070106858 0.313486064 1.791633041 0.020473709 0.084554698 5.09E-06 5.293043251 -0.227870593 VLLS(ph)PSIPSVGQDQTLSPGSK ddPTM_A459_MK2206_30min_R2 1 VLLSPSIPSVGQDQTLSPGSK 21 0 Q13625-2;Q13625;Q13625-3 Q13625-2 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 VLLS(0.769)PS(0.228)IPS(0.004)VGQDQTLSPGSK 67.478 0.005613 4448600 28285 34165 29394 34711 37773 40436 36750 27631 26794 30990 TRUE FALSE 30450.52135 32468.41578 30373.98129 31875.00027 36289.84223 41974.82031 31924.68086 31242.46657 29124.49369 29978.79884 1.015735204 1.08304592 1.013182064 1.063251414 1.210516886 1.400150171 1.064908605 1.042152047 0.971503023 1 14.87165496 -7.71711908 3.466374293 0.999880116 1.13034664 0.211387156 0.107973125 0.421056957 10.32682548 0.067159802 0.03356712 1.92E-08 7.71711908 0.130466524 VLMKS(ph)PSPALHPPQK ddPTM_A459_MK2206_30min_R1 1 VLMKSPSPALHPPQK 15 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 VLMKS(0.993)PS(0.007)PALHPPQK 69.422 0.030043 8527400 2984.8 2451.7 2596 2424.7 3205.4 2663.5 2490.6 2832.7 1774.7 1724.9 TRUE FALSE 2730.927086 2292.093884 2419.790753 2611.450814 3077.72213 2814.305068 2324.456618 2807.934003 1959.186416 1938.593634 1.408715596 1.182348814 1.248219694 1.347085211 1.587605611 1.451725116 1.199042738 1.448438679 1.010622536 1 10.9207947 -8.271869519 24.33341453 1.00531112 1.354519051 0.587098207 0.118643688 415.1868754 968611.5833 0.117280606 0.031695089 5.35E-09 8.271869519 0.349207931 VLMKS(ph)PSPALHPPQK ddPTM_A459_MK2206_30min_R2 2 VLMKSPSPALHPPQK 15 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 VLMKS(0.999)PS(0.001)PALHPPQK;VLMKS(0.885)PS(0.115)PALHPPQK 88.781 0.0094989 20751900 87196 163459 125686 165347 169377 185455 174524 120907 139642 137039 TRUE FALSE 93871.7928 155341.8638 129876.3085 151837.6212 162726.4079 192512.62 151608.7892 136709.96 151787.8087 132567.4287 0.708106009 1.171795103 0.97969999 1.145361442 1.227499165 1.452186423 1.143635286 1.031248486 1.14498569 1 17.01636683 -4.759899192 24.96377455 1.152152072 0.708105453 0.510003242 0.127969261 33.99527058 550820.6434 0.034056485 0.209412002 1.74E-05 4.759899192 -0.444046619 VLNT(ph)GSDVEEAVADALKKPAR ddPTM_A459_MK2206_30min_R1 1 VLNTGSDVEEAVADALKKPAR 21 2 E3W994;J3KR49;O75122 E3W994 CLASP2 CLIP-associating protein 2 1 VLNT(0.602)GS(0.398)DVEEAVADALKKPAR 94.295 0.00058646 2143900 1906 1342.6 1343.1 1834.7 2036.1 1680.4 1110 1661.5 785.41 442.78 TRUE FALSE 1743.884691 1255.196496 1251.934114 1976.008912 1954.997825 1775.542796 1035.953925 1646.973681 867.0561801 497.6349292 3.504345432 2.522323941 2.515768168 3.970800271 3.928578383 3.56796256 2.081754846 3.309602248 1.742353941 1 8.958943942 -8.440797608 1.104959177 0.973007391 3.244535148 0.593711159 0.605381494 0.37800068 1.006263912 0.610358897 0.197934135 3.62E-09 8.440797608 2.271527757 VLNTGS(ph)DVEEAVADALK ddPTM_A459_MK2206_30min_R1 3 VLNTGSDVEEAVADALK 17 0 E3W994;J3KR49;O75122 E3W994 CLASP2 CLIP-associating protein 2 1 VLNT(0.021)GS(0.979)DVEEAVADALK;VLNT(0.231)GS(0.769)DVEEAVADALK;VLNT(0.003)GS(0.997)DVEEAVADALK 238.63 1.75E-22 15351000 3790.72 3737.65 3625.73 2794.62 3121.55 3147.78 3554.66 3457.09 3687.45 3479.47 TRUE FALSE 3468.299358 3494.328306 3379.625549 3009.862117 2997.212054 3326.004583 3317.535117 3426.865027 4070.773623 3910.533012 0.88691218 0.893568292 0.864236548 0.769680784 0.766445915 0.850524615 0.848358806 0.876316608 1.040976667 1 11.93314955 -8.159695057 3.673809851 1.021247004 0.838940086 0.742996629 0.041725 0.132001562 3.109803284 0.037599642 0.012393187 6.92E-09 8.159695057 -0.182306918 VLNTGS(ph)DVEEAVADALK ddPTM_A459_MK2206_30min_R2 3 VLNTGSDVEEAVADALK 17 0 E3W994;J3KR49;O75122 E3W994 CLASP2 CLIP-associating protein 2 1 VLNT(0.002)GS(0.998)DVEEAVADALK;VLNTGS(1)DVEEAVADALK;VLNT(0.165)GS(0.835)DVEEAVADALK 254.4 5.07E-31 12347100 50481.4 50914.1 46606.4 55972 53019.8 42523.2 58946.6 39223.3 39857 59216.2 TRUE FALSE 54346.2948 48385.77983 48160.23411 51398.90855 50937.97625 44141.45017 51206.84061 44349.91998 43323.68982 57283.98024 0.948717156 0.844665116 0.84072779 0.897264965 0.889218522 0.770572331 0.893912057 0.774211565 0.75629678 1 15.80584412 -6.701398172 24.99994497 0.828317645 0.880246713 0.077213693 0.072878389 168.5384828 70174.7168 0.02297396 0.022973951 1.99E-07 6.701398172 0.051929068 VLNTGS(ph)DVEEAVADALKKPAR ddPTM_A459_MK2206_30min_R1 1 VLNTGSDVEEAVADALKKPAR 21 2 E3W994;J3KR49;O75122 E3W994 CLASP2 CLIP-associating protein 2 1 VLNT(0.318)GS(0.682)DVEEAVADALKKPAR 107.03 5.27E-05 4312100 2302.4 1928.6 1915.8 1824 2130.3 1619.4 1735.2 2556 1456 981.25 TRUE FALSE 2106.56879 1803.047789 1785.760834 1964.484796 2045.44564 1711.089029 1619.447974 2533.653161 1607.35641 1102.814658 1.910174819 1.634950874 1.61927557 1.781337219 1.854750139 1.551565366 1.468467944 2.297442406 1.457503669 1 10.10697463 -8.530753825 24.55642098 0.999999979 1.750599573 0.536511526 0.220482873 623.8271632 1945246.473 0.207481865 0.053571587 2.95E-09 8.530753825 0.750599594 VLPCGPS(ph)PQHHR ddPTM_A459_MK2206_30min_R2 2 VLPCGPSPQHHR 12 0 P98174 P98174 FGD1 "FYVE, RhoGEF and PH domain-containing protein 1" 1 VLPCGPS(1)PQHHR;VLPCGPS(1)PQHHR 86.498 0.019717 9474200 39847 55250 51498 60913 49838 52686 53024 44990 48768 43296 TRUE FALSE 42897.71696 52506.36534 53214.91762 55936.21305 47881.1097 54691.00265 46061.88511 50870.34747 53009.75249 41883.25507 1.024221181 1.253636215 1.270553531 1.335526882 1.143204119 1.305796375 1.099768512 1.214574832 1.265655031 1 15.35408595 -7.269910566 24.85925995 1.162880838 1.227351622 0.102486361 0.106067748 1707.781603 5011580.256 0.043156552 0.029632907 5.37E-08 7.269910566 0.064470783 VLPPPAGYVPIRT(ph)PAR ddPTM_A459_MK2206_30min_R1 2 VLPPPAGYVPIRTPAR 16 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VLPPPAGYVPIRT(1)PAR;VLPPPAGYVPIRT(1)PAR 157.73 0.00010266 94216000 9439.7 10505.4 10541.2 9157.7 10279.1 8150 10519.3 9645.4 8983.3 8032.8 TRUE FALSE 8636.803945 9821.496551 9825.692713 9863.027641 9869.661681 8611.445957 9817.576691 9561.071285 9917.146182 9027.963909 0.956672405 1.087897188 1.088361984 1.09249746 1.093232293 0.953863578 1.087462997 1.059050676 1.098492006 1 13.14018494 -10.91747781 5.432190596 0.999969514 1.059263469 0.095589265 0.052814006 1.92E-05 2.14E-06 0.050407457 0.01221932 1.21E-11 10.91747781 0.059293955 VLPPPAGYVPIRT(ph)PAR ddPTM_A459_MK2206_30min_R2 2 VLPPPAGYVPIRTPAR 16 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VLPPPAGYVPIRT(1)PAR;VLPPPAGYVPIRT(1)PAR 126.43 0.0015528 79174000 328330 346230 287000 315800 347640 317680 369960 254080 281050 315120 TRUE FALSE 353467.1972 329036.7217 296568.4368 289998.1298 333989.9068 329769.535 321383.8076 287289.1284 305495.221 304837.6602 1.159526015 1.079383438 0.972873353 0.951319891 1.095632038 1.081787384 1.054278554 0.942433189 1.002157085 1 18.21768162 -4.941667425 3.419784733 1.015407543 1.158321514 0.466234678 0.049246852 0.251384209 5.572408442 0.013948101 0.075683619 1.14E-05 4.941667425 0.142913971 VLPPPAGYVPIRT(ph)PARK ddPTM_A459_MK2206_30min_R2 1 VLPPPAGYVPIRTPARK 17 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VLPPPAGYVPIRT(1)PARK 89.877 0.012013 7099000 29375 48918 40885 46701 48837 43051 37543 31495 42392 40989 TRUE FALSE 31623.97259 46488.80325 42248.08549 42885.37891 46919.41399 44689.33597 32613.559 35611.50464 46079.17953 39651.53229 0.797547302 1.172433966 1.065484309 1.081556662 1.183293842 1.12705193 0.822504381 0.898111689 1.162103376 1 15.275089 -7.224370443 24.99957043 0.962189017 1.081130587 0.123124059 0.129058136 1054.856517 711404.1183 0.048844518 0.037833675 5.97E-08 7.224370443 0.11894157 VLPQPTNLAT(ph)PNTK ddPTM_A459_MK2206_30min_R2 1 VLPQPTNLATPNTK 14 0 A0A2R8Y6S3;C9J167;P54278 A0A2R8Y6S3 PMS2 Mismatch repair endonuclease PMS2 1 VLPQPT(0.004)NLAT(0.94)PNT(0.057)K 130.27 0.0023037 3225600 20124 20035 15362 21253 16680 19141 21022 15951 16736 22319 TRUE FALSE 21664.70891 19040.09103 15874.16141 19516.56192 16025.05939 19869.42417 18261.78615 18035.85047 18191.66703 21590.73286 1.003426287 0.881864046 0.735230319 0.903932351 0.742219335 0.920275578 0.845815947 0.835351472 0.842568298 1 14.39812459 -10.57975492 6.24541959 1.000000189 0.852845293 0.242703208 0.075634583 1.94E-07 2.93E-08 0.071187289 0.017265431 2.63E-11 10.57975492 -0.147154897 VLPS(ph)FWIPSLTPEAK ddPTM_A459_MK2206_30min_R2 1 VLPSFWIPSLTPEAK 15 0 A0A075B797;M0R3B2;Q9Y314;A0A075B6F9 A0A075B797 NOSIP Nitric oxide synthase-interacting protein 1 VLPS(0.567)FWIPS(0.432)LT(0.001)PEAK 124.47 0.001322 16497000 127500 118400 105440 118020 125410 88152 133900 88909 79998 133100 TRUE FALSE 137261.498 112520.4282 108955.317 108377.3885 120485.7733 91506.68613 116318.7692 100529.7116 86956.08144 128756.9579 1.066051111 0.873897846 0.846209158 0.841720636 0.935761261 0.710693136 0.903397929 0.780771099 0.675350543 1 16.97429087 VLPSFWIPS(ph)LTPEAK ddPTM_A459_MK2206_30min_R1 1 VLPSFWIPSLTPEAK 15 0 A0A075B797;M0R3B2;Q9Y314;A0A075B6F9 A0A075B797 NOSIP Nitric oxide synthase-interacting protein 1 VLPS(0.027)FWIPS(0.737)LT(0.236)PEAK 110.35 0.0035228 4251100 4360.2 4368.7 4183.2 3649.7 3292.3 2963.1 3456.1 3795.2 3235.4 3255.4 TRUE FALSE 3989.342094 4084.296836 3899.256039 3930.800526 3161.160719 3130.868161 3225.549875 3762.018967 3571.731408 3658.703529 1.090370417 1.116323529 1.065748019 1.074369786 0.864011171 0.855731583 0.88161007 1.028238264 0.976228705 1 11.8371168 -6.182665843 6.770564816 0.929359898 1.088722821 0.646995559 0.055102366 0.174473327 12.68642415 0.018102364 0.023437066 6.57E-07 6.182665843 0.159362923 VLPSISLS(ph)PGPQPPK ddPTM_A459_MK2206_30min_R1 2 VLPSISLSPGPQPPK 15 0 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 1 VLPS(0.006)IS(0.084)LS(0.91)PGPQPPK;VLPS(0.006)IS(0.152)LS(0.842)PGPQPPK 87.083 0.019023 10856900 4914.5 5152.4 4963.9 3404.6 3880.7 4919.3 6305.4 4504.4 6680.1 8912.2 TRUE FALSE 4496.495968 4816.977824 4626.964298 3666.822882 3726.123501 5197.826515 5884.778271 4465.018506 7374.5203 10016.31062 0.448917385 0.480913383 0.461942972 0.366085181 0.372005586 0.518936234 0.587519546 0.445774764 0.736251159 1 13.29006359 -8.668502433 0.84179397 1.005490338 0.43930246 0.875765284 0.064801651 0.270913965 0.406712049 0.065384332 0.022982264 2.15E-09 8.668502433 -0.566187878 down VLPSISLS(ph)PGPQPPK ddPTM_A459_MK2206_30min_R2 2 VLPSISLSPGPQPPK 15 0 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 1 VLPS(0.002)IS(0.166)LS(0.832)PGPQPPK;VLPS(0.009)IS(0.032)LS(0.959)PGPQPPK 174.24 2.69E-05 13332500 91745 59272 78310 78865 56744 60022 82777 57065 45547 80207 TRUE FALSE 98769.06774 56328.63867 80920.81632 72421.47722 54515.94544 62306.17927 71908.28047 64523.59143 49508.59573 77589.85216 1.272963732 0.725979456 1.04293041 0.933388519 0.702616952 0.803019693 0.926774294 0.831598329 0.63808081 1 16.24358036 -4.751467638 24.99927051 0.845421676 1.272964598 0.512412347 0.125259537 343.7952336 861839.5939 0.03100477 0.408361981 1.77E-05 4.751467638 0.427542922 VLRLLATNYLDWDDT(ph)KY(ph)Y(ph)DK ddPTM_A459_MK2206_30min_R1 1 VLRLLATNYLDWDDTKYYDK 20 2 Q8IYF3-3;Q8IYF3 Q8IYF3-3 TEX11 Testis-expressed sequence 11 protein 3 VLRLLATNYLDWDDT(1)KY(1)Y(1)DK 65.808 0.021802 0 548.94 580.78 575.91 428.79 400.43 328.83 570.47 412.19 707.1 652.69 TRUE FALSE 502.2497704 542.9711164 536.8188338 461.8154801 384.4800252 347.4480704 532.4149872 408.5862663 780.6055754 733.5501648 0.684683604 0.740196298 0.731809302 0.629562233 0.524135967 0.473652774 0.725805831 0.556998398 1.064147502 1 9.51875182 -8.265397088 24.99367715 1.032073814 0.634189851 0.766161723 0.088108712 178.0838774 1124609.215 0.081794719 0.024176956 5.43E-09 8.265397088 -0.397883963 VLS(ph)LDSGTVACLNDSNR ddPTM_A459_MK2206_30min_R1 1 VLSLDSGTVACLNDSNR 17 0 Q96RV3-2;Q96RV3-4;Q96RV3-3;Q96RV3 Q96RV3-2 PCNX Pecanex-like protein 1 1 VLS(0.999)LDSGTVACLNDSNR 66.326 0.041406 8380600 2822.3 2993.9 3043.5 2877.7 3356.5 3103.7 3336 2984 2886 2582.6 TRUE FALSE 2582.248565 2798.996566 2836.9157 3099.340953 3222.803497 3279.428812 3113.461527 2957.911203 3186.010028 2902.551986 0.889647654 0.96432263 0.977386698 1.067798602 1.110334462 1.129843265 1.072663485 1.019072601 1.097658214 1 11.50310619 -5.488142302 1.685342485 1.077158058 0.913030105 0.688841006 0.040211621 0.230942632 1.241720599 0.012454644 0.038608877 3.25E-06 5.488142302 -0.164127953 VLS(ph)PEELEDR ddPTM_A459_MK2206_30min_R2 4 VLSPEELEDR 10 0 A0A494C179;A0A0A0MRH8;A0A494C1P7;A0A0A0MSH9;A0A494C1F7;Q86WJ1-5;Q86WJ1-3;Q86WJ1-4;Q86WJ1-2;Q86WJ1 A0A494C179 CHD1L Chromodomain-helicase-DNA-binding protein 1-like 1 VLS(1)PEELEDR;VLS(1)PEELEDR;VLS(1)PEELEDR;VLS(1)PEELEDR 126.66 0.0034191 12589500 38102.2 44274.4 44252.6 50276.1 46530 42920.5 48668.9 31366 37416.8 45441.8 TRUE FALSE 41019.33373 42075.79768 45727.9596 46168.3818 44702.99841 44553.8697 42278.61497 35465.6439 40671.24563 43959.03779 0.933126287 0.957159205 1.04024023 1.050259153 1.016923951 1.013531504 0.961772984 0.806788449 0.925207822 1 15.42387219 -7.530935772 24.71672386 0.896454995 1.003067007 0.345621121 0.055225068 160.2352093 491548.0761 0.026022873 0.015059483 2.94E-08 7.530935772 0.106612012 VLS(ph)PESLSCTEIPIPLNER ddPTM_A459_MK2206_30min_R1 1 VLSPESLSCTEIPIPLNER 19 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 VLS(0.991)PES(0.009)LSCTEIPIPLNER 112.8 0.00055728 4421500 913.55 1024.1 901.72 1103.3 1235 1035.2 893.31 929.58 881.84 830.02 TRUE FALSE 835.8477753 957.4309039 840.5137587 1188.276357 1185.807335 1093.812129 833.7189198 921.4527801 973.5104237 932.8491439 0.896016018 1.02635127 0.901017881 1.273814062 1.271167308 1.172549856 0.893733917 0.987783272 1.043588269 1 9.865499984 -9.325753516 12.71604594 1.000000095 1.056602445 0.011525598 0.137478749 0 0 0.145713444 0.035340701 4.72E-10 9.325753516 0.05660235 VLS(ph)PESLSCTEIPIPLNER ddPTM_A459_MK2206_30min_R2 3 VLSPESLSCTEIPIPLNER 19 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 VLS(0.963)PES(0.037)LSCTEIPIPLNER;VLS(0.991)PES(0.009)LSCTEIPIPLNER;VLS(0.997)PES(0.003)LSCTEIPIPLNER 148.97 4.96E-05 6198600 22799.1 24379.3 23912.8 30791.2 28878 26261.3 29903.2 24027.4 24721.9 25705.6 TRUE FALSE 24544.61663 23168.65941 24710.04082 28275.46046 27744.10462 27260.69217 25976.87392 27167.86368 26872.16618 24866.82838 0.987042507 0.931709467 0.993694911 1.137075466 1.115707407 1.096267355 1.044639611 1.09253433 1.080643087 1 14.60193489 -5.603211884 5.740532196 1.085033876 0.960050401 0.645585802 0.037840013 0.110743042 5.98484594 0.010138079 0.017863732 2.49E-06 5.603211884 -0.124983475 VLS(ph)PLIIK ddPTM_A459_MK2206_30min_R1 2 VLSPLIIK 8 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 VLS(1)PLIIK;VLS(1)PLIIK 128.35 0.0043517 176828000 19555.3 20068.1 18126.6 17514.4 18830.1 16846.1 18093.7 16049.3 15419.1 13820.5 TRUE FALSE 17892.01905 18761.66304 16896.2169 18863.36212 18080.05724 17799.91162 16886.70229 15908.98266 17021.97062 15532.68788 1.151894584 1.207882576 1.087784486 1.214429999 1.164000551 1.145964675 1.087171932 1.024225993 1.095880556 1 13.92301988 -7.34976478 2.192770153 1.04426422 1.165616019 0.6630004 0.039583686 0.192476845 1.807103431 0.019468431 0.011780289 4.47E-08 7.34976478 0.121351799 VLS(ph)PLIIK ddPTM_A459_MK2206_30min_R2 2 VLSPLIIK 8 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 VLS(1)PLIIK;VLS(1)PLIIK 118.71 0.0082341 133043000 143161 178703 154843 182159 175766 155094 204499 159400 148606 168520 TRUE FALSE 154121.5162 169828.8689 160005.3883 167276.027 168864.5437 160996.2108 177648.0357 180234.1273 161531.4813 163021.2062 0.945407777 1.041759369 0.981500457 1.0260998 1.035844033 0.987578332 1.089723477 1.105587006 0.990861772 1 17.31470012 -2.170778122 0.467900876 1.043113227 1.78E-12 0.223398527 0.041608366 75.30174674 1.611925895 0.025228962 70.75807904 0.006748727 2.170778122 -1.043113227 VLS(ph)PLRS(ph)PPLIGSESAYESFLSADDK ddPTM_A459_MK2206_30min_R1 3 VLSPLRSPPLIGSESAYESFLSADDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VLS(1)PLRS(0.909)PPLIGS(0.07)ES(0.021)AYESFLSADDK;VLS(0.996)PLRS(0.983)PPLIGS(0.013)ES(0.006)AY(0.001)ESFLSADDK;VLS(0.994)PLRS(0.866)PPLIGS(0.096)ES(0.033)AY(0.009)ES(0.003)FLSADDK 94.276 1.11E-05 222019500 5072.45 5168.93 4807.62 4130.01 3540.06 3646.99 4130.51 3934.91 4913.05 4327.57 TRUE FALSE 4641.011491 4832.431718 4481.292149 4448.104086 3399.051914 3853.479422 3854.971214 3900.507497 5423.779129 4863.702043 0.954213776 0.993570674 0.921374728 0.914551107 0.698861049 0.792293481 0.7926002 0.801962674 1.115154481 1 12.24783913 -5.822253543 2.89940078 0.847688822 0.965297402 0.091890548 0.11349064 0.485574209 8.277878496 0.03369277 0.056710005 1.51E-06 5.822253543 0.117608581 VLS(ph)PLRS(ph)PPLIGSESAYESFLSADDK ddPTM_A459_MK2206_30min_R2 2 VLSPLRSPPLIGSESAYESFLSADDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VLS(0.997)PLRS(0.997)PPLIGS(0.004)ES(0.001)AY(0.001)ESFLSADDK;VLS(1)PLRS(0.996)PPLIGS(0.003)ES(0.001)AYESFLSADDK 87.808 0.00013222 66232000 76384 73036 73112 78722 68658 60080 85395 67817 58568 75825 TRUE FALSE 82232.01777 69409.13844 75549.51759 72290.16078 65962.14194 62366.3865 74182.53392 76680.91475 63662.13877 73350.83646 1.121078119 0.946262399 1.029974861 0.985539692 0.899269117 0.850247789 1.011338623 1.045399323 0.867912922 1 16.1625258 -2.107593972 1.282526339 0.956065482 199.9999991 0.342807393 0.065338798 2323.256448 4.111071932 0.020074072 1360179.428 0.007805595 2.107593972 199.0439337 VLS(ph)PLRS(ph)PPLIGSESAYESFLSADDKASGR ddPTM_A459_MK2206_30min_R1 2 VLSPLRSPPLIGSESAYESFLSADDKASGR 30 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VLS(0.999)PLRS(0.995)PPLIGS(0.004)ES(0.001)AY(0.001)ESFLSADDKASGR;VLS(0.999)PLRS(0.999)PPLIGS(0.001)ESAYESFLSADDKASGR 73.934 0.00017107 14771000 1262.09 999.66 1374.84 1498.79 1462.86 1211.93 1107.55 1185.24 571.59 451.75 TRUE FALSE 1154.742618 934.5819523 1281.519691 1614.227065 1404.591189 1280.548429 1033.66736 1174.877572 631.008826 507.7162005 2.274385999 1.84075661 2.524086665 3.179388532 2.766488812 2.522173663 2.035915654 2.31404389 1.242837682 1 8.987878485 -8.259458634 1.473933711 0.953097514 2.497540503 0.690098979 0.352547309 0.245992351 1.026400754 0.369700721 0.113664048 5.50E-09 8.259458634 1.544442988 VLS(ph)PLRSPPLIGS(ph)ESAYESFLSADDK ddPTM_A459_MK2206_30min_R2 1 VLSPLRSPPLIGSESAYESFLSADDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VLS(0.784)PLRS(0.278)PPLIGS(0.625)ES(0.161)AY(0.149)ES(0.003)FLSADDK 63.09 0.0055714 4977700 12244 11030 10823 13129 12211 10718 12686 9351.6 9703.9 11438 TRUE FALSE 13181.41005 10482.26624 11183.83342 12056.3187 11731.53478 11125.881 11020.31296 10573.88623 10547.92768 11064.779 1.191294472 0.947354325 1.010759765 1.089612247 1.060259296 1.005522207 0.995981299 0.955634652 0.9532886 1 13.43368702 -7.107264493 1.917655413 0.968841057 1.052248343 0.301464207 0.059652794 0.471052604 3.422584181 0.028189023 0.020056071 7.81E-08 7.107264493 0.083407286 VLS(ph)PLRSPPLIGSESAYESFLSADDK ddPTM_A459_MK2206_30min_R1 1 VLSPLRSPPLIGSESAYESFLSADDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLS(0.972)PLRS(0.024)PPLIGS(0.002)ES(0.002)AYESFLSADDK 63.74 0.0011784 9532700 3024.5 2490.5 2719.6 2348.4 2287.8 2537.6 2479 2344.2 2214.6 2431.8 TRUE FALSE 2767.250393 2328.367997 2535.001129 2529.274175 2196.672082 2681.276719 2313.630433 2323.704907 2444.815595 2733.069743 1.012506322 0.851924106 0.927528884 0.925433455 0.803738026 0.981049505 0.846531794 0.850217933 0.894530994 1 11.41630656 -4.748948621 24.95310517 0.893042617 1.012506606 0.248670147 0.059235999 771.8290239 1541806.996 0.013780809 0.237314986 1.78E-05 4.748948621 0.119463988 VLS(ph)PLRSPPLIGSESAYESFLSADDKASGR ddPTM_A459_MK2206_30min_R1 1 VLSPLRSPPLIGSESAYESFLSADDKASGR 30 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLS(0.979)PLRS(0.021)PPLIGSESAYESFLSADDKASGR 92.613 2.20E-07 7537800 1259.2 1182.4 1175.3 1102 1367.2 1180.9 1135.8 1166.9 655.19 250.9 TRUE FALSE 1152.098428 1105.425545 1095.523911 1186.876231 1312.741529 1247.761537 1060.032854 1156.697916 723.2993451 281.9833862 4.085696123 3.920179696 3.885065448 4.209028932 4.655386073 4.424946995 3.759203224 4.102007327 2.565042412 1 8.139466355 -8.517605978 1.952230411 0.999189677 4.157658278 0.93972727 0.253437742 0.07997205 0.6924162 0.265618939 0.074657917 3.04E-09 8.517605978 3.158468601 VLS(ph)PPGRR ddPTM_A459_MK2206_30min_R1 1 VLSPPGRR 8 1 Q86VQ6;H0YBI6;H0YBQ0 Q86VQ6 TXNRD3 Thioredoxin reductase 3 1 VLS(1)PPGRR 62.463 0.047741 2924700 871.45 922.7 1042.7 791.38 1003.3 862.52 1071.5 948.71 804.04 760.7 TRUE FALSE 797.3286013 862.6320623 971.9244291 852.3322247 963.3364365 911.355137 1000.02219 940.4155285 887.6228353 854.941259 0.932612145 1.00899571 1.136831822 0.996948288 1.126786696 1.065985677 1.169696958 1.099976775 1.038226692 1 9.739681489 -4.98103959 3.646235395 1.084363162 0.937863651 0.418048732 0.054400004 0.201575721 5.632635242 0.013413515 0.061421512 1.04E-05 4.98103959 -0.146499511 VLS(ph)PPGRR ddPTM_A459_MK2206_30min_R2 1 VLSPPGRR 8 1 Q86VQ6;H0YBI6;H0YBQ0 Q86VQ6 TXNRD3 Thioredoxin reductase 3 1 VLS(1)PPGRR 66.962 0.041452 4341800 6590.3 10570 8150.8 10204 9238.8 8874.5 7643.1 7704.7 9751 10080 TRUE FALSE 7094.858435 10045.10917 8422.543604 9370.300559 8876.038291 9212.225316 6639.551789 8711.730744 10599.12435 9751.090426 0.727596415 1.030152396 0.863754025 0.960948996 0.910261099 0.944737964 0.680903519 0.893410928 1.086968112 1 13.25134784 -8.226153438 9.153984483 1.043374234 0.880759009 0.305073486 0.100667263 0.464961202 118.1850878 0.068197046 0.02528378 5.94E-09 8.226153438 -0.162615225 VLS(ph)PPHIK ddPTM_A459_MK2206_30min_R1 1 VLSPPHIK 8 0 A0A0D9SG79;Q9NZ09-2;Q9NZ09;Q9NZ09-3;Q9NZ09-4 A0A0D9SG79 UBAP1 Ubiquitin-associated protein 1 1 VLS(1)PPHIK 86.898 0.021979 24137000 9237 9870.4 8341 7048 8363.2 6814.4 7484.4 6484.6 6507.6 6115 TRUE FALSE 8451.344645 9227.835166 7774.836159 7590.838181 8030.076035 7200.225439 6985.129332 6427.905826 7184.088308 6872.572366 1.229720721 1.342704693 1.131284728 1.104511932 1.168423642 1.047675464 1.016377705 0.935298384 1.045327415 1 12.74663448 -5.854904257 0.536562805 0.981177413 1.339693903 0.758855561 0.056250952 0.733875872 0.347955214 0.04069134 0.146043767 1.40E-06 5.854904257 0.358516489 VLS(ph)PPKLNEVSSDANR ddPTM_A459_MK2206_30min_R1 1 VLSPPKLNEVSSDANR 16 1 Q9H6Z4;Q9H6Z4-3;Q9H6Z4-2;B7Z7F3;K7ESQ0 Q9H6Z4 RANBP3 Ran-binding protein 3 1 VLS(0.987)PPKLNEVS(0.006)S(0.006)DANR 199.33 3.99E-06 60277000 1248.5 1301.9 1427.2 1152.3 1076.7 812.81 951.23 1350.8 1315.6 919.57 TRUE FALSE 1142.308519 1217.146073 1330.32564 1241.050346 1033.812759 858.8305998 887.7751823 1338.990098 1452.361328 1033.493274 1.105288779 1.177701011 1.287212674 1.200830597 1.000309131 0.830997764 0.859004315 1.295596335 1.405293449 1 10.01331328 -6.245518175 22.66283643 1.05796008 1.19842954 0.116818545 0.170845791 577.8737882 822562.7591 0.056802965 0.072990968 5.68E-07 6.245518175 0.14046946 VLS(ph)STSEEDEPGVVK ddPTM_A459_MK2206_30min_R2 2 VLSSTSEEDEPGVVK 15 0 Q8NI08-2;Q8NI08;Q8NI08-7;Q8NI08-4;Q8NI08-3 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 VLS(0.495)S(0.495)T(0.008)S(0.002)EEDEPGVVK;VLS(0.928)S(0.016)T(0.04)S(0.016)EEDEPGVVK 196.37 3.17E-05 9166900 48507 46667 40998 53790 42339 39320 45881 38844 37292 53239 TRUE FALSE 52220.73322 44349.58464 42364.85286 49395.18493 40676.55812 40816.35015 39856.76959 43921.04417 40535.59075 51501.81579 1.013959069 0.861126622 0.822589499 0.959095989 0.789808233 0.792522546 0.77389057 0.852805741 0.787071099 1 15.65233568 -4.762057357 3.814333031 0.839338738 1.035314267 0.316644128 0.072307377 0.306680796 7.867868892 0.017604966 0.174442693 1.73E-05 4.762057357 0.195975529 VLS(ph)TSTDLEAAVADALKKPVR ddPTM_A459_MK2206_30min_R1 3 VLSTSTDLEAAVADALKKPVR 21 2 Q7Z460 Q7Z460 CLASP1 CLIP-associating protein 1 1 VLS(0.345)T(0.345)S(0.25)T(0.06)DLEAAVADALKKPVR;VLS(0.284)T(0.284)S(0.216)T(0.216)DLEAAVADALKKPVR;VLS(0.345)T(0.345)S(0.257)T(0.053)DLEAAVADALKKPVR 142.89 4.30E-06 89530400 26788 21330.4 24636.6 23935.1 29254.9 17128.7 21274.3 29736.6 15469.8 9335.6 TRUE FALSE 24509.53993 19941.78708 22964.33623 25778.58555 28089.61538 18098.51219 19855.13026 29476.61604 17077.94107 10492.16461 2.335985075 1.900636125 2.18871292 2.45693682 2.677199266 1.724955037 1.892376931 2.809393213 1.627685202 1 13.35702473 -8.525045034 9.459406796 1.000005877 2.226387291 0.595796271 0.328456687 0.062265339 140.6520796 0.320663202 0.082832417 2.99E-09 8.525045034 1.226381414 VLSANHGDPSIQTS(ph)GSEQTSPK ddPTM_A459_MK2206_30min_R2 1 VLSANHGDPSIQTSGSEQTSPK 22 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 VLSANHGDPSIQT(0.122)S(0.366)GS(0.107)EQT(0.243)S(0.162)PK 131.94 1.47E-05 45079000 136450 232840 204010 271320 296840 279710 367370 237010 254720 234460 TRUE FALSE 146896.7169 221277.5042 210811.5916 249152.2881 285184.5701 290354.5601 319133.8777 267988.0208 276875.0852 226809.5894 0.647665371 0.975609121 0.929465073 1.098508616 1.257374394 1.280168801 1.407056371 1.181555072 1.220738003 1 17.79112211 -5.190410141 0.852091065 1.247797841 0.580151656 0.700367381 0.113759594 0.765741328 0.64720406 0.043963982 0.427696797 6.45E-06 5.190410141 -0.667646186 VLSANHGDPSIQTSGSEQT(ph)SPK ddPTM_A459_MK2206_30min_R1 2 VLSANHGDPSIQTSGSEQTSPK 22 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 VLSANHGDPSIQT(0.001)S(0.001)GS(0.014)EQT(0.493)S(0.493)PK;VLSANHGDPSIQT(0.041)S(0.125)GS(0.079)EQT(0.377)S(0.377)PK 164.05 1.19E-09 33430800 13825.6 7629.9 11548.8 6750.7 13443.9 13148.4 13639.7 10508.3 8266.5 8071.2 TRUE FALSE 12649.66012 7133.192123 10764.89963 7270.640084 12908.401 13892.85105 12729.8205 10416.42704 9125.832257 9071.12119 1.394497974 0.786362785 1.186722061 0.801515042 1.423021556 1.531547287 1.403334851 1.148306458 1.006031346 1 13.14706516 -6.274889826 24.93011443 1.280995647 1.03431273 0.156985213 0.23210358 1237.853759 2294330.857 0.072255809 0.082393584 5.31E-07 6.274889826 -0.246682917 VLSANHGDPSIQTSGSEQT(ph)SPK ddPTM_A459_MK2206_30min_R2 4 VLSANHGDPSIQTSGSEQTSPK 22 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 VLSANHGDPSIQTSGS(0.006)EQT(0.497)S(0.497)PK;VLSANHGDPSIQTSGS(0.019)EQT(0.49)S(0.49)PK;VLSANHGDPS(0.002)IQT(0.006)S(0.014)GS(0.002)EQT(0.575)S(0.401)PK;VLSANHGDPSIQTS(0.01)GS(0.009)EQT(0.49)S(0.49)PK 226.7 3.56E-30 39948500 105982.7 175242 127682 212400 211963 205389 231214 143991 162065 157087 TRUE FALSE 114096.817 166539.7371 131938.8542 195046.2406 203640.2676 213205.2223 200855.3241 162811.1181 176161.1208 151961.2641 0.750828296 1.095935455 0.868240041 1.283526047 1.340080111 1.403023485 1.321753444 1.071398814 1.159250167 1 17.21334409 -5.763288856 24.99988209 1.244723027 0.924094644 0.512879506 0.141949961 39.30127246 531259.6021 0.040335492 0.063444612 1.72E-06 5.763288856 -0.320628383 VLSANHGDPSIQTSGSEQTS(ph)PK ddPTM_A459_MK2206_30min_R2 1 VLSANHGDPSIQTSGSEQTSPK 22 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 VLSANHGDPSIQT(0.022)S(0.022)GS(0.005)EQT(0.301)S(0.649)PK 73.649 0.0014994 48013000 19706 67771 49496 101730 98099 141910 79260 66915 89192 50181 TRUE FALSE 21214.70651 64405.59069 51146.17194 93418.33358 94247.14035 147310.4845 68853.06679 75661.02025 96949.75894 48543.59808 0.437023776 1.326757662 1.053613122 1.924421289 1.94149474 3.034601684 1.418375842 1.558619947 1.997168788 1 15.56699343 -5.277145681 1.258461347 1.897077297 0.536656312 0.371713334 0.534587705 0.743852938 1.771107019 0.172120176 1.043495498 5.28E-06 5.277145681 -1.360420986 VLSAPPHFHFGQTNR ddPTM_A459_MK2206_30min_R1 2 VLSAPPHFHFGQTNR 15 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 108.97 0.0021781 13414800 8068.3 5588.9 7599.1 5780.3 8840.2 8862.1 7558.4 6217.3 5209.3 4325.7 FALSE TRUE 7382.048717 5225.061594 7083.294264 6225.499708 8488.076115 9363.864444 7054.192927 6162.942802 5750.825377 4861.600373 1.518440051 1.074761641 1.456988177 1.280545341 1.745942789 1.926086828 1.451002218 1.267677787 1.182907877 1 12.24721559 -8.116180575 1.909102004 1.050449825 1.491895513 0.358564132 0.220805611 0.443115147 2.874739171 0.221000149 0.068804732 7.65E-09 8.116180575 0.441445688 VLSEDEEDVDFDIIHNANDTFTVK ddPTM_A459_MK2206_30min_R1 2 VLSEDEEDVDFDIIHNANDTFTVK 24 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 0 ; 198.6 1.42E-30 2767400 1096.75 1043.01 1122.24 831.66 1142.77 1020.8 1100.55 1120.86 928.16 840.61 FALSE TRUE 1003.465653 975.1098594 1046.065476 895.7145973 1097.251051 1078.596814 1027.134318 1111.060439 1024.645553 944.7511131 1.062148157 1.032134121 1.107239209 0.948095837 1.161418109 1.141672975 1.08720096 1.176035068 1.084566654 1 9.883790503 -6.289238784 24.99931935 1.117879512 1.042016053 0.245530083 0.059471285 930.9399532 837168.6191 0.017331576 0.019656393 5.14E-07 6.289238784 -0.075863459 VLSKPPEGVVS(ph)EVEMLSSQER ddPTM_A459_MK2206_30min_R2 1 VLSKPPEGVVSEVEMLSSQER 21 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VLSKPPEGVVS(0.333)EVEMLS(0.333)S(0.333)QER 48.51 0.040751 4715000 11770 16381 17494 20864 19687 17248 19223 17514 18351 15304 TRUE FALSE 12671.12025 15567.54336 18077.24123 19159.34446 18913.98946 17904.38473 16698.99701 19803.13993 19947.13681 14804.63173 0.855888919 1.051531956 1.221053084 1.294145292 1.277572438 1.209377244 1.127957609 1.337631377 1.347357852 1 13.85376098 -4.948096564 2.022545027 1.240696379 0.812283923 0.585000574 0.098547343 0.337485596 1.992076308 0.026243177 0.238835774 1.13E-05 4.948096564 -0.428412457 VLSKPPEGVVSEVEMLS(ph)SQER ddPTM_A459_MK2206_30min_R1 1 VLSKPPEGVVSEVEMLSSQER 21 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VLSKPPEGVVSEVEMLS(0.5)S(0.5)QER 89.829 0.00042935 19038000 1804.2 2034.9 2105.4 1897.2 1876.2 1277.5 1783.8 1834.3 1539.1 1410 TRUE FALSE 1650.743316 1902.42764 1962.491314 2043.322673 1801.466981 1349.830946 1664.805957 1818.262908 1699.094953 1584.681445 1.041687792 1.200511085 1.238413765 1.289421719 1.136800703 0.851799553 1.050561904 1.147399633 1.072199689 1 10.62997714 -6.532313167 24.99359693 1.030691325 1.198453164 0.433997707 0.091178167 206.3568358 546675.0766 0.031694217 0.031733242 2.94E-07 6.532313167 0.167761839 VLSKPPEGVVSEVEMLSS(ph)QER ddPTM_A459_MK2206_30min_R1 1 VLSKPPEGVVSEVEMLSSQER 21 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VLSKPPEGVVSEVEMLS(0.231)S(0.769)QER 162.73 2.91E-08 18756000 3586.8 4497.3 4626 3766.7 4287.9 4001.5 4081.7 3964.6 3329.8 3594.1 TRUE FALSE 3281.723825 4204.524953 4312.000009 4056.811887 4117.103863 4228.061472 3809.41724 3929.93792 3675.944626 4039.364242 0.812435727 1.040887798 1.067494722 1.004319404 1.019245509 1.046714586 0.943073467 0.972910014 0.910030491 1 11.97991253 -10.32677032 8.023315952 1.000007598 0.98664649 0 0.072641903 0 0 0.070236413 0.017034832 4.71E-11 10.32677032 -0.013361108 VLSKPPEGVVSEVEMLSS(ph)QER ddPTM_A459_MK2206_30min_R2 1 VLSKPPEGVVSEVEMLSSQER 21 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VLSKPPEGVVS(0.077)EVEMLS(0.248)S(0.674)QER 69.876 0.0036368 4481300 23086 27791 23476 30532 28279 26509 28984 22944 25993 23822 TRUE FALSE 24853.48191 26410.93935 24258.67812 28037.43793 27168.62437 27517.81857 25178.36598 25942.85958 28253.82416 23044.69009 1.078490612 1.146074833 1.052679729 1.216655022 1.178953775 1.194106688 1.092588613 1.125763006 1.226044874 1 14.49214675 -5.750130117 24.99530534 1.153906173 1.097781056 0.120396372 0.06660512 454.6908929 1004932.273 0.01734282 0.029687448 1.78E-06 5.750130117 -0.056125117 VLSPLRS(ph)PPLIGSESAYESFLSADDK ddPTM_A459_MK2206_30min_R1 6 VLSPLRSPPLIGSESAYESFLSADDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLS(0.037)PLRS(0.963)PPLIGSESAYESFLSADDK;VLS(0.031)PLRS(0.74)PPLIGS(0.041)ES(0.13)AY(0.053)ES(0.003)FLS(0.001)ADDK;VLS(0.007)PLRS(0.319)PPLIGS(0.319)ES(0.319)AY(0.031)ES(0.003)FLS(0.002)ADDK;VLS(0.002)PLRS(0.997)PPLIGSESAYESFLSADDK;VLS(0.07)PLRS(0.924)PPLIGSES(0.002)AY(0.003)ES(0.001)FLSADDK;VLS(0.048)PLRS(0.952)PPLIGSESAYESFLSADDK 121.5 4.24E-09 3842330400 14294.27 15797.35 15263.52 12645.7 12440.2 11918.42 13553.2 12586.9 13978.78 13238.56 TRUE FALSE 13078.46727 14768.93964 14227.47479 13619.67401 11944.68049 12593.23064 12649.09076 12476.85406 15431.9242 14878.65276 0.879008838 0.992626139 0.956234077 0.915383552 0.80280659 0.846395897 0.850150277 0.838574182 1.037185588 1 13.86095628 -8.269464641 24.86926832 1.018592817 0.886904506 0.487323827 0.054725259 612.6744694 1898574.995 0.056269061 0.015616112 5.38E-09 8.269464641 -0.131688312 VLSPLRS(ph)PPLIGSESAYESFLSADDK ddPTM_A459_MK2206_30min_R2 4 VLSPLRSPPLIGSESAYESFLSADDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLS(0.008)PLRS(0.989)PPLIGS(0.002)ESAYESFLSADDK;VLS(0.166)PLRS(0.829)PPLIGS(0.002)ES(0.002)AYESFLSADDK;VLS(0.005)PLRS(0.992)PPLIGS(0.001)ES(0.001)AYESFLSADDK;VLS(0.104)PLRS(0.894)PPLIGS(0.001)ESAYESFLSADDK 95.834 2.19E-06 1950444500 101452.85 109062 88447.5 104302.71 87088.97 79078.17 121490.4 80832.54 76369.97 110002.6 TRUE FALSE 109220.1582 103646.1397 91396.29551 95780.84495 83669.41945 82087.54517 105538.5645 91397.63052 83012.49195 106413.2242 1.026377681 0.973996799 0.858880992 0.900084042 0.786269001 0.771403609 0.991780536 0.858893537 0.780095637 1 16.69931792 -5.117242539 2.453656966 0.861331522 1.027376126 0.328071486 0.076381714 0.365806559 3.954857118 0.020483509 0.09242382 7.63E-06 5.117242539 0.166044604 VLSPLRS(ph)PPLIGSESAYESFLSADDKASGR ddPTM_A459_MK2206_30min_R1 3 VLSPLRSPPLIGSESAYESFLSADDKASGR 30 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLS(0.055)PLRS(0.938)PPLIGS(0.005)ES(0.001)AYESFLSADDKASGR;VLS(0.006)PLRS(0.993)PPLIGSESAYESFLSADDKASGR;VLS(0.021)PLRS(0.976)PPLIGS(0.002)ESAYESFLSADDKASGR 99.722 2.04E-08 715077000 5015.67 5497.26 5390.3 6737.82 7174.49 4594.98 4270.44 6050.72 2810.88 1660.28 TRUE FALSE 4589.060928 5139.387375 5024.421454 7256.768064 6888.714871 4855.143797 3985.566739 5997.819193 3103.081035 1865.968021 2.459345968 2.754274091 2.692662145 3.889009877 3.6917647 2.601943732 2.135924461 3.214320463 1.662987254 1 10.86570855 -8.429399141 3.416322984 1.009587096 2.936310619 0.615607943 0.516323809 0.158543593 3.443085941 0.541373205 0.143769383 3.72E-09 8.429399141 1.926723523 VLSPLRS(ph)PPLIGSESAYESFLSADDKASGR ddPTM_A459_MK2206_30min_R2 2 VLSPLRSPPLIGSESAYESFLSADDKASGR 30 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLS(0.07)PLRS(0.734)PPLIGS(0.077)ES(0.095)AY(0.022)ESFLSADDKASGR;VLS(0.016)PLRS(0.97)PPLIGS(0.013)ES(0.001)AYESFLSADDKASGR 66.925 0.00016951 78394000 20293.8 83175 60589 72658 94276 80062 65747 46639 91315 49476 TRUE FALSE 21847.50893 79044.65045 62609.00702 66721.60898 90574.25054 83108.81551 57114.33992 52734.87744 99257.41364 47861.60217 0.456472578 1.651525374 1.308126017 1.394052977 1.892419945 1.736440314 1.193322775 1.101820145 2.073842269 1 15.54658107 -4.755964539 24.99535121 1.490026012 0.456470938 0.460723834 0.333275434 157.6238736 719554.7825 0.081249681 0.686140023 1.75E-05 4.755964539 -1.033555073 VLSPLRSPPLIGS(ph)ESAYESFLSADDKASGR ddPTM_A459_MK2206_30min_R1 2 VLSPLRSPPLIGSESAYESFLSADDKASGR 30 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLSPLRS(0.355)PPLIGS(0.606)ES(0.036)AY(0.003)ESFLSADDKASGR;VLSPLRS(0.261)PPLIGS(0.476)ES(0.176)AY(0.082)ES(0.003)FLSADDKASGR 142.45 2.07E-18 176282000 3440.2 3341.8 3589.5 4047.8 4916.8 3296.4 2563 3788.2 1761.65 1099.48 TRUE FALSE 3147.592925 3124.248213 3345.854741 4359.562257 4720.953445 3483.039319 2392.026946 3755.080167 1944.779822 1235.691883 2.547231205 2.528339188 2.707677202 3.528033418 3.820494016 2.818695637 1.935779444 3.038848291 1.573838793 1 10.27110334 -8.415098685 0.974783132 0.974286455 2.964967062 0.600805746 0.514839615 0.40843902 0.850328356 0.530376705 0.181079838 3.85E-09 8.415098685 1.990680607 VLSPLRSPPLIGSESAYESFLSADDKASGR ddPTM_A459_MK2206_30min_R1 1 VLSPLRSPPLIGSESAYESFLSADDKASGR 30 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 169.1 8.35E-28 3175100 445.86 427.33 427.45 362.44 458.98 499.33 500 361.38 451.11 225.56 FALSE TRUE 407.9372657 399.5107393 398.4358849 390.3551916 440.6978547 527.6016331 466.6459123 358.2204928 498.0044988 253.5040757 1.609194111 1.57595391 1.571713922 1.539837932 1.738425126 2.081235308 1.840782682 1.413075872 1.964483204 1 7.985865132 -10.71463833 4.402665568 0.999808747 1.69897444 0.536681877 0.196146992 147468571.1 103.9634806 288854.1312 0.049741354 1.93E-11 10.71463833 0.699165693 VLSQSTPGT(ph)PSK ddPTM_A459_MK2206_30min_R1 2 VLSQSTPGTPSK 12 0 Q6MZP7-3;Q6MZP7 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 VLSQS(0.002)T(0.002)PGT(0.877)PS(0.119)K;VLSQS(0.001)T(0.001)PGT(0.932)PS(0.066)K 201.76 0.00017363 29868000 8816 8993.8 8337.6 7317.6 8926 7550.3 7835.7 8628.4 6518.4 6360.2 TRUE FALSE 8066.152905 8408.301985 7771.666942 7881.20282 8570.458519 7977.791461 7312.99475 8552.962808 7196.011006 7148.149593 1.128425308 1.176290714 1.087227798 1.102551467 1.19897582 1.116063865 1.023061235 1.196528234 1.006695637 1 12.80335411 -8.288910178 21.78318111 1.00334729 1.126384788 0.494929647 0.050586875 144.0063313 114185.4571 0.047982119 0.012415592 5.14E-09 8.288910178 0.123037498 VLSQSTPGT(ph)PSK ddPTM_A459_MK2206_30min_R2 2 VLSQSTPGTPSK 12 0 Q6MZP7-3;Q6MZP7 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 VLS(0.001)QS(0.012)T(0.015)PGT(0.75)PS(0.222)K;VLSQSTPGT(0.949)PS(0.051)K 175.66 0.00024195 37807000 104446 131155 98669 115471 116239 96725 129434 94004 104601 114496 TRUE FALSE 112442.4661 124642.0334 101958.5752 106036.6499 111674.8728 100405.9377 112439.1603 106290.6456 113699.0059 110760.0049 1.015190151 1.125334308 0.92053603 0.957355049 1.008259912 0.906517996 1.015160305 0.959648256 1.026534858 1 16.7570775 -5.262556887 24.99997936 0.972463527 1.070262228 0.420505757 0.045044435 81.78628278 1829718.698 0.010984115 0.025139382 5.46E-06 5.262556887 0.097798702 VLSSAAS(ph)LPGSELPSSRPEGSQGGELSR ddPTM_A459_MK2206_30min_R1 1 VLSSAASLPGSELPSSRPEGSQGGELSR 28 1 O15027;O15027-5;A0A0C4DH09;Q8N9G1 O15027 SEC16A Protein transport protein Sec16A 1 VLS(0.007)S(0.017)AAS(0.359)LPGS(0.07)ELPS(0.21)S(0.21)RPEGS(0.124)QGGELS(0.002)R 57.484 0.0035871 7619900 520.71 513.08 388.36 486.29 459.75 528.45 457.82 394.22 459.4 442.22 TRUE FALSE 476.4208801 479.6783987 361.9992052 523.7441401 441.437184 558.3703823 427.2796631 390.7733761 507.156274 497.0055522 0.958582611 0.965136902 0.728360485 1.053799375 0.888193667 1.123469104 0.859708028 0.786255555 1.020423759 1 8.957118158 VLSSAAS(ph)LPGSELPSSRPEGSQGGELSR ddPTM_A459_MK2206_30min_R2 1 VLSSAASLPGSELPSSRPEGSQGGELSR 28 1 O15027;O15027-5;A0A0C4DH09;Q8N9G1 O15027 SEC16A Protein transport protein Sec16A 1 VLS(0.012)S(0.031)AAS(0.814)LPGS(0.011)ELPS(0.037)S(0.037)RPEGS(0.055)QGGELS(0.002)R 50.099 0.015472 19145000 4534.2 10386 7841.8 10210 8181.4 14806 10780 7686.9 10862 13257 TRUE FALSE 4881.341838 9870.246343 8103.241698 9375.81034 7860.157128 15369.45271 9364.573051 8691.604223 11806.75713 12824.42518 0.380628509 0.769644347 0.631860032 0.731090104 0.61290522 1.198451587 0.730213863 0.677738308 0.920646108 1 13.64660654 -4.219429988 0.425807516 0.878493934 2.58E-17 0.390217802 0.168556745 10.38633377 1.024585272 0.125341792 5.092427127 6.03E-05 4.219429988 -0.878493934 VLSSAASLPGSELPSSRPEGS(ph)QGGELSR ddPTM_A459_MK2206_30min_R1 1 VLSSAASLPGSELPSSRPEGSQGGELSR 28 1 O15027;O15027-5;A0A0C4DH09;Q8N9G1 O15027 SEC16A Protein transport protein Sec16A 1 VLS(0.001)S(0.002)AAS(0.021)LPGS(0.017)ELPS(0.139)S(0.139)RPEGS(0.673)QGGELS(0.009)R 58.332 0.0031987 26947000 1444.8 999.16 1248.8 993.27 1408.4 1010.3 1580.8 1380.2 1184.7 1371.1 TRUE FALSE 1321.912173 934.1145024 1164.034935 1069.771828 1352.300446 1067.502313 1475.347716 1368.133057 1307.853804 1540.962219 0.857848529 0.606189101 0.755394857 0.694223268 0.877568852 0.692750477 0.957419785 0.887843349 0.848725419 1 10.58961578 -7.412011453 0.51342635 0.975238615 0.709627626 0.456774727 0.088232842 0.780935854 0.446289474 0.082300607 0.065706021 3.87E-08 7.412011453 -0.265610988 VLSSAASLPGSELPSSRPEGSQGGELS(ph)R ddPTM_A459_MK2206_30min_R2 2 VLSSAASLPGSELPSSRPEGSQGGELSR 28 1 O15027;O15027-5;A0A0C4DH09;Q8N9G1 O15027 SEC16A Protein transport protein Sec16A 1 VLSSAASLPGS(0.001)ELPS(0.026)S(0.026)RPEGS(0.084)QGGELS(0.863)R;VLSSAASLPGSELPS(0.022)S(0.065)RPEGS(0.18)QGGELS(0.733)R 55.442 0.0045221 18462900 8462.9 13443.8 13360.9 16037.1 20103.1 16049.4 17465.5 9181.9 11415.6 12795.7 TRUE FALSE 9110.826131 12776.20044 13806.34574 14726.81763 19313.75128 16660.17116 15172.25887 10382.00586 12408.50825 12378.17736 0.736039392 1.032155226 1.115377922 1.189740396 1.560306556 1.345930882 1.225726408 0.838734618 1.002450352 1 13.59551128 -7.752363997 24.97034908 0.940444357 1.186897766 0.201076983 0.204037147 305.6591683 841007.8041 0.108393781 0.061427303 1.77E-08 7.752363997 0.24645341 VLSST(ph)SEEDEPGVVK ddPTM_A459_MK2206_30min_R1 1 VLSSTSEEDEPGVVK 15 0 Q8NI08-2;Q8NI08;Q8NI08-7;Q8NI08-4;Q8NI08-3 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 VLSS(0.001)T(0.5)S(0.5)EEDEPGVVK 284.91 2.42E-55 31451000 3467.9 3767.7 3711.6 3133.1 3080.2 3176.7 3533.7 3434.4 3033.3 3056.4 TRUE FALSE 3172.936894 3522.422045 3459.666933 3374.411905 2957.509112 3356.562009 3297.973321 3404.373403 3348.62239 3435.049907 0.923694555 1.025435479 1.007166425 0.982347272 0.860979954 0.977150871 0.960094732 0.991069561 0.974839516 1 11.74611534 -10.20813246 8.666416047 0.999970285 0.968017041 0.048222674 0.043795528 0 0 0.043992971 0.010669863 6.19E-11 10.20813246 -0.031953244 VLSSTINNQAVETDEGIEEEIPDS(ph)PGIEK ddPTM_A459_MK2206_30min_R1 1 VLSSTINNQAVETDEGIEEEIPDSPGIEK 29 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 VLSSTINNQAVETDEGIEEEIPDS(1)PGIEK 141.62 1.96E-14 3358000 762.3 888.1 951.21 592.44 889.37 625.18 922.06 605.54 628.26 635.25 TRUE FALSE 697.462382 830.2845286 886.6445154 638.0698315 853.9445096 660.5771513 860.5510598 600.2458276 693.5698753 713.9495659 0.976907075 1.162945631 1.241886763 0.893718355 1.1960852 0.925243439 1.205338725 0.840739817 0.971455 1 9.479678354 -7.768406444 24.9997499 0.929573076 1.085625192 0.240492134 0.120790939 223.6577511 802530.0506 0.060791039 0.030207047 1.70E-08 7.768406444 0.156052117 VLSSTS(ph)EEDEPGVVK ddPTM_A459_MK2206_30min_R1 3 VLSSTSEEDEPGVVK 15 0 Q8NI08-2;Q8NI08;Q8NI08-7;Q8NI08-4;Q8NI08-3 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 VLSST(0.073)S(0.927)EEDEPGVVK;VLSST(0.016)S(0.984)EEDEPGVVK;VLSST(0.027)S(0.973)EEDEPGVVK 293.8 1.57E-67 51066600 22337.3 22625.4 22906 20241.9 19853.6 18047.7 21287.2 21529.1 21111 19587.5 TRUE FALSE 20437.39534 21152.48235 21351.20454 21800.93465 19062.78907 19069.54518 19867.16973 21340.87335 23305.564 22014.14738 0.928375512 0.960858578 0.9698856 0.99031474 0.865933563 0.866240461 0.902472823 0.969416302 1.058663031 1 14.42614335 -8.032211118 4.685365949 1.027194534 0.927374647 0.500086621 0.040995083 0.190673732 10.08724809 0.031512824 0.012088902 9.29E-09 8.032211118 -0.099819887 VLSSTS(ph)EEDEPGVVK ddPTM_A459_MK2206_30min_R2 1 VLSSTSEEDEPGVVK 15 0 Q8NI08-2;Q8NI08;Q8NI08-7;Q8NI08-4;Q8NI08-3 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 VLS(0.001)S(0.002)T(0.29)S(0.707)EEDEPGVVK 151.38 0.00024757 5078600 89122 84123 89602 76868 84801 74441 110620 71852 69675 98214 TRUE FALSE 95945.24884 79945.57415 92589.28596 70587.63851 81471.28665 77273.90442 96095.46112 81243.3031 75735.20556 95009.28522 1.009851286 0.841450117 0.974528813 0.742955158 0.857508679 0.813330026 1.011432313 0.855109087 0.797134779 1 16.53578089 -5.501250534 0.003272203 1.758471588 1.79E-07 0.007755496 0.094030665 541560.4236 356.5837459 94063.04969 97579.60828 3.15E-06 5.501250534 -1.758471409 VLST(ph)SPTISK ddPTM_A459_MK2206_30min_R2 1 VLSTSPTISK 10 0 A0A087WX19;A0A087WX45;Q6IPM2-2;Q6IPM2-3;Q6IPM2-4;Q6IPM2;H7C427 A0A087WX19 IQCE IQ domain-containing protein E 1 VLS(0.002)T(0.623)S(0.373)PT(0.002)ISK 131.12 0.0062305 4373300 49644 64499 51791 63090 64723 63837 75716 50946 56251 57367 TRUE FALSE 53444.78281 61296.07345 53517.68609 57935.34519 62181.64981 66266.36177 65774.39825 57604.81712 61143.6103 55495.11949 0.963053748 1.104530885 0.964367436 1.043971897 1.120488619 1.194093505 1.185228518 1.038015913 1.10178356 1 15.76007328 -6.168149561 4.240909434 1.116776203 1.018241869 0.292560426 0.066547802 0.28639481 9.123434196 0.020235238 0.026474361 6.79E-07 6.168149561 -0.098534334 VLSTS(ph)PTISK ddPTM_A459_MK2206_30min_R1 1 VLSTSPTISK 10 0 A0A087WX19;A0A087WX45;Q6IPM2-2;Q6IPM2-3;Q6IPM2-4;Q6IPM2;H7C427 A0A087WX19 IQCE IQ domain-containing protein E 1 VLS(0.024)T(0.139)S(0.833)PT(0.004)ISK 107.11 0.011488 12636000 3841.3 4204.2 4256.9 3589.9 4127.4 3688.4 3701.8 3518.7 3801.9 2955.2 TRUE FALSE 3514.577264 3930.505816 3967.953488 3866.39472 3962.996918 3897.234021 3454.859676 3487.936377 4197.12111 3321.312487 1.058189278 1.183419456 1.194694418 1.164116516 1.193202065 1.173401791 1.040209161 1.050168086 1.263693533 1 11.69753775 -7.235831401 24.11767317 1.092698362 1.165295602 0.182685926 0.074770769 847.9292332 798583.3123 0.027939901 0.021633043 5.81E-08 7.235831401 0.07259724 VLSTS(ph)TDLEAAVADALK ddPTM_A459_MK2206_30min_R1 2 VLSTSTDLEAAVADALK 17 0 Q7Z460 Q7Z460 CLASP1 CLIP-associating protein 1 1 VLST(0.002)S(0.996)T(0.002)DLEAAVADALK;VLST(0.002)S(0.993)T(0.004)DLEAAVADALK 257.37 4.78E-40 294460000 5012 5228.6 6276.1 4154.6 5039.4 4237.6 6164.5 4973.3 6741.4 6733.4 TRUE FALSE 4585.703081 4888.21719 5850.095818 4474.588012 4838.670027 4477.52925 5753.277453 4929.818962 7442.192654 7567.584427 0.605966557 0.645941547 0.773046654 0.591283527 0.639394258 0.59167219 0.760252827 0.651438912 0.98343041 1 12.88561715 -8.267241683 8.225687756 0.993129041 0.659160549 0.832657124 0.059950444 0.050532864 34.9505233 0.04945531 0.015171942 5.40E-09 8.267241683 -0.333968492 VLSTS(ph)TDLEAAVADALK ddPTM_A459_MK2206_30min_R2 1 VLSTSTDLEAAVADALK 17 0 Q7Z460 Q7Z460 CLASP1 CLIP-associating protein 1 1 VLS(0.004)T(0.025)S(0.939)T(0.032)DLEAAVADALK 93.424 0.0073436 15295000 2286.1 767.44 1097.5 2145.5 973.26 823.26 2283.8 857.9 649.1 2305.4 TRUE FALSE 2461.125574 729.3300456 1134.090102 1970.205787 935.0449222 854.5897362 1983.934317 970.0304756 705.5575447 2230.174987 1.10355716 0.32702817 0.508520681 0.883431031 0.419269756 0.383194028 0.889586839 0.434957114 0.316368693 1 11.1229412 -10.77168027 5.68673578 1.000022578 0.577756707 0.183655494 0.262009071 7.21E-05 9.53E-06 0.243935355 0.059159855 1.69E-11 10.77168027 -0.422265871 VLSTS(ph)TDLEAAVADALLLGDSR ddPTM_A459_MK2206_30min_R1 1 VLSTSTDLEAAVADALLLGDSR 22 0 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460-4 H0Y5T1;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 VLS(0.005)T(0.158)S(0.59)T(0.247)DLEAAVADALLLGDSR 244.73 3.26E-37 21888000 1403.2 1430.5 1502.8 1368.2 1748.8 1474.8 1615.7 1546.7 1364.8 1433.4 TRUE FALSE 1283.850472 1337.37419 1400.794123 1473.579001 1679.141593 1558.301902 1507.919601 1533.177365 1506.675844 1610.980414 0.796937356 0.83016167 0.86952896 0.914709446 1.042310371 0.96730034 0.93602603 0.951704535 0.93525398 1 10.65372324 -5.684991894 1.968754896 0.967759869 0.814142804 0.794470565 0.032277209 0.154211083 1.210404833 0.010349811 0.022310727 2.07E-06 5.684991894 -0.153617064 VLSTST(ph)DLEAAVADALK ddPTM_A459_MK2206_30min_R2 2 VLSTSTDLEAAVADALK 17 0 Q7Z460 Q7Z460 CLASP1 CLIP-associating protein 1 1 VLS(0.018)T(0.119)S(0.119)T(0.744)DLEAAVADALK;VLS(0.234)T(0.234)S(0.234)T(0.298)DLEAAVADALK 109.5 0.0037034 7014800 8429 7449.9 7521.9 7345.8 7116.7 9339.1 9364.7 6467.2 6935.3 8821.4 TRUE FALSE 9074.330721 7079.948799 7772.676392 6745.624642 6837.262599 9694.505995 8135.103641 7312.485245 7538.519858 8533.55844 1.06337008 0.829659614 0.910836487 0.790482035 0.801220575 1.136044953 0.95330731 0.85690926 0.883396992 1 13.05893175 VLSTST(ph)DLEAAVADALLLGDSR ddPTM_A459_MK2206_30min_R1 1 VLSTSTDLEAAVADALLLGDSR 22 0 H0Y5T1;Q7Z460-2;Q7Z460-3;F8WA11;Q7Z460-5;Q7Z460-4 H0Y5T1;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 VLS(0.004)T(0.021)S(0.391)T(0.584)DLEAAVADALLLGDSR 100.28 0.00090297 0 152.24 161.57 0 134.49 122.11 179.43 233.91 191.61 146.37 181 TRUE FALSE 139.2911886 151.0517636 0 144.8484431 117.2461001 189.5891715 218.3062907 189.934774 161.5856853 203.4236465 0.684734499 0.742547714 0 0.712053125 0.576364165 0.931991805 1.073160837 0.933690735 0.794330886 1 7.668343581 -6.728276141 3.467681249 0.955437671 0.524000878 0.488809235 0.206466537 0.210663712 5.265574326 0.075367788 0.071744571 1.87E-07 6.728276141 -0.431436793 VLSTSTDLEAAVADALKKPVR ddPTM_A459_MK2206_30min_R1 1 VLSTSTDLEAAVADALKKPVR 21 2 Q7Z460 Q7Z460 CLASP1 CLIP-associating protein 1 0 151.59 8.95E-07 1473400 1749.8 1753.8 2021.5 1923.4 1910.8 1251.8 1634 2031.6 1188.3 720.53 FALSE TRUE 1600.970321 1639.627301 1884.286212 2071.540601 1834.68879 1322.675834 1524.998841 2013.837935 1311.828037 809.7946961 1.977007665 2.024744431 2.326869046 2.558105914 2.265622137 1.633347119 1.883191936 2.486849994 1.619951382 1 9.661412384 -6.746121144 24.85437219 1.827503963 2.24259828 0.290875423 0.377961855 352.7740631 572387.0465 0.125029435 0.124575799 1.79E-07 6.746121144 0.415094318 VLT(ph)PEEQLADK ddPTM_A459_MK2206_30min_R1 2 VLTPEEQLADK 11 0 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 VLT(1)PEEQLADK;VLT(1)PEEQLADK 145.1 0.0016553 34582000 7242.5 9262 7670.7 5417.8 4337.9 4022.9 7626.3 5088.7 10954.2 13810.6 TRUE FALSE 6626.487343 8659.042117 7150.034256 5835.079895 4165.112257 4250.673121 7117.563442 5044.210032 12092.92829 15521.56139 0.42692144 0.557871847 0.46065174 0.375933822 0.268343638 0.273856026 0.458559758 0.324980838 0.779105142 1 13.92198607 -8.437189364 3.359643646 0.995952803 0.39472578 0.846723723 0.086675781 0.087634628 1.89315292 0.092854411 0.024674291 3.65E-09 8.437189364 -0.601227022 down VLT(ph)PEEQLADK ddPTM_A459_MK2206_30min_R2 3 VLTPEEQLADK 11 0 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 VLT(1)PEEQLADK;VLT(1)PEEQLADK;VLT(1)PEEQLADK 155.14 0.0012407 36354000 330310 214254 242319 209091 175900 120900 275383 209033 129869 276699 TRUE FALSE 355598.7876 203614.4579 250397.7945 192007.5965 168993.2822 125500.9342 239224.8813 236354.3308 141164.7709 267670.3343 1.328495324 0.760691163 0.935470848 0.717328638 0.631348568 0.468863815 0.893729527 0.883005326 0.527382951 1 18.03009773 -2.481871527 1.239330777 0.732773887 199.9972511 0.498479576 0.16937053 415.8040384 2.519591591 0.049521808 233505.0158 0.003297072 2.481871527 199.2644772 VLT(ph)PEEQLADKLR ddPTM_A459_MK2206_30min_R2 3 VLTPEEQLADKLR 13 1 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 VLT(1)PEEQLADKLR;VLT(1)PEEQLADKLR;VLT(1)PEEQLADKLR 119.96 0.0043291 16497300 68722 106960 89874 94498 102963 87035 98181 71217 80341 89653 TRUE FALSE 73983.40916 101648.5219 92870.3543 86777.21112 98920.15527 90347.17791 85289.71676 80525.30642 87328.91496 86727.62995 0.853054663 1.172043119 1.070827767 1.000571688 1.140584094 1.041734658 0.983420356 0.928485034 1.006933027 1 16.40420406 -7.251332908 4.386651586 0.972756801 1.056147787 0.128072899 0.083123896 0.357825702 17.83014052 0.033036028 0.023651983 5.61E-08 7.251332908 0.083390986 VLT(ph)PPQAAGDGILATTANQR ddPTM_A459_MK2206_30min_R1 1 VLTPPQAAGDGILATTANQR 20 0 Q96QT6;Q96QT6-4;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-2;K7EPF7 Q96QT6 PHF12 PHD finger protein 12 1 VLT(1)PPQAAGDGILATTANQR 81.357 0.0087337 8273800 2529.3 2707.3 3211.6 2709.8 2950.6 2274.2 2718.3 2945.5 2620.4 2377.7 TRUE FALSE 2314.169753 2531.054278 2993.60554 2918.509266 2833.071354 2402.963239 2536.967167 2919.747804 2892.799957 2672.267427 0.865994821 0.947156057 1.120249235 1.092147154 1.060175088 0.899222591 0.949368743 1.092610633 1.08252637 1 11.38384868 -5.013015295 5.207218065 1.035385731 0.880947677 0.406629965 0.066367449 0.171082568 14.78231318 0.018810088 0.06394543 9.70E-06 5.013015295 -0.154438054 VLT(ph)PPQAAGDGILATTANQR ddPTM_A459_MK2206_30min_R2 4 VLTPPQAAGDGILATTANQR 20 0 Q96QT6;Q96QT6-4;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-2;K7EPF7 Q96QT6 PHF12 PHD finger protein 12 1 VLT(1)PPQAAGDGILATTANQR;VLT(1)PPQAAGDGILATTANQR;VLT(1)PPQAAGDGILATTANQR;VLT(1)PPQAAGDGILATTANQR 190.25 3.15E-15 32202400 115452 126957 116877 128533 115469 103436 140050 109942 101841 123133 TRUE FALSE 124291.0939 120652.5 120773.6208 118031.4427 110935.1069 107372.3295 121661.2668 124311.7969 110698.9461 119115.1803 1.043453014 1.012906161 1.013922999 0.990901768 0.931326357 0.901416001 1.021374996 1.043626821 0.929343731 1 16.86199776 -5.799278338 2.96466179 0.971781971 1.024492199 0.238655158 0.041728016 0.420649436 7.542472324 0.013193914 0.022490607 1.59E-06 5.799278338 0.052710229 VLTANSNPS(ph)SPSAAK ddPTM_A459_MK2206_30min_R1 2 VLTANSNPSSPSAAK 15 0 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANSNPS(0.499)S(0.499)PS(0.002)AAK;VLTANSNPS(0.5)S(0.5)PSAAK 279.19 4.14E-55 111488000 10624.4 11317.4 11452.1 10031.2 9292.7 10052.5 12892.4 11728 12635.1 11380.8 TRUE FALSE 9720.738989 10580.6352 10674.76336 10803.80476 8922.552081 10621.66386 12032.37152 11625.46333 13948.56386 12790.73942 0.759982568 0.827210598 0.834569684 0.844658343 0.697579068 0.830418282 0.940709612 0.908896894 1.090520524 1 13.64281205 -7.620917241 1.394985838 1.028654932 0.798110871 0.748015228 0.05477132 0.223890948 0.821863681 0.041802719 0.018058283 2.39E-08 7.620917241 -0.230544061 VLTANSNPS(ph)SPSAAK ddPTM_A459_MK2206_30min_R2 1 VLTANSNPSSPSAAK 15 0 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANS(0.053)NPS(0.74)S(0.193)PS(0.015)AAK 290.37 3.29E-67 100230000 43330 51525 37188 40919 47692 34917 47575 39657 36673 47721 TRUE FALSE 46647.37812 48966.34342 38427.82936 37575.78681 45819.37245 36245.7909 41328.34535 44840.30606 39862.75125 46163.86768 1.010473785 1.060707126 0.832422223 0.813965309 0.992537557 0.785154986 0.895253094 0.971329057 0.863505448 1 15.49447648 -5.253547127 24.98308279 0.890026536 1.03559047 0.382713057 0.071628742 569.4139629 1802481.047 0.017772279 0.045259678 5.58E-06 5.253547127 0.145563934 VLTANSNPS(ph)SPSAAKR ddPTM_A459_MK2206_30min_R1 1 VLTANSNPSSPSAAKR 16 1 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANS(0.011)NPS(0.618)S(0.369)PS(0.001)AAKR 84.208 0.0088842 22756000 3029.3 3147.4 3056.7 2745.8 3396.2 2834.1 3115.3 3592.5 2355.8 2064.1 TRUE FALSE 2771.642128 2942.503688 2849.21972 2957.281992 3260.922162 2994.564293 2907.484021 3561.091151 2600.69384 2319.816291 1.194767938 1.268420995 1.228209204 1.274791458 1.405681206 1.290862688 1.253325116 1.535074637 1.121077497 1 11.17979485 -8.515543894 24.4604209 0.999999978 1.304088838 0.546594888 0.092879839 247.84021 826501.6655 0.088791972 0.022925989 3.05E-09 8.515543894 0.30408886 VLTANSNPS(ph)SPSAAKR ddPTM_A459_MK2206_30min_R2 1 VLTANSNPSSPSAAKR 16 1 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANSNPS(0.588)S(0.405)PS(0.007)AAKR 74.505 0.016583 6010900 11235 27014 19493 22725 22512 30608 23919 17799 14695 19631 TRUE FALSE 12095.16024 25672.52404 20142.88689 20868.29481 21628.06577 31772.80889 20778.40657 20125.39041 15973.14454 18990.44208 0.636907776 1.35186553 1.060685518 1.098884098 1.138892169 1.673094747 1.094150757 1.059764187 0.841114939 1 14.21298587 -7.936640813 2.967391062 0.925774547 1.172633388 0.115966257 0.24659565 0.536554817 9.28662555 0.171570699 0.067104735 1.16E-08 7.936640813 0.246858841 VLTANSNPSS(ph)PSAAK ddPTM_A459_MK2206_30min_R1 2 VLTANSNPSSPSAAK 15 0 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANS(0.001)NPS(0.226)S(0.769)PS(0.004)AAK;VLTANSNPS(0.181)S(0.819)PSAAK 307.07 2.32E-94 34039000 7622.6 8389.4 7648.2 6554.1 6998.7 6440.2 8046.9 7542.3 7681.3 8440.2 TRUE FALSE 6974.257842 7843.248535 7129.061493 7058.897918 6719.926959 6804.838558 7510.105983 7476.358466 8479.798623 9485.835696 0.735228615 0.826837907 0.751548068 0.7441514 0.708416968 0.717368377 0.791717907 0.788160232 0.893943232 1 13.21155916 -8.436312733 1.386796521 1.000043099 0.751147103 0.86362985 0.031863412 0.150614171 0.625049313 0.032528909 0.009868362 3.66E-09 8.436312733 -0.248895995 VLTANSNPSS(ph)PSAAK ddPTM_A459_MK2206_30min_R2 3 VLTANSNPSSPSAAK 15 0 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANSNPS(0.078)S(0.916)PS(0.006)AAK;VLTANSNPS(0.017)S(0.973)PS(0.009)AAK;VLTANSNPS(0.125)S(0.873)PS(0.002)AAK 279.19 4.14E-55 149161000 186816 208315 195443 206314 199500 179131 264328 205796 197658 235609 TRUE FALSE 201118.7766 197970.38 201958.9721 189457.4862 191666.6276 185947.9557 229621.4161 232694.2438 214849.9356 227921.0976 0.882405265 0.868591728 0.886091609 0.831241549 0.84093412 0.815843543 1.007460119 1.020942099 0.942650495 1 17.79817495 -7.267936363 24.99571395 0.994508361 0.854644656 0.855522353 0.027894774 194.0115488 746413.3446 0.011948857 0.008269911 5.40E-08 7.267936363 -0.139863706 VLTANSNPSS(ph)PSAAKR ddPTM_A459_MK2206_30min_R1 1 VLTANSNPSSPSAAKR 16 1 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANSNPS(0.457)S(0.542)PS(0.001)AAKR 72.676 0.018838 19447000 1938.4 2012.1 1973 1945.4 2280.1 2134.5 2380.3 2467.2 1996.1 1748.5 TRUE FALSE 1773.528901 1881.111924 1839.078257 2095.235045 2189.278789 2255.353545 2221.51453 2445.629531 2203.601738 1965.117381 0.902505325 0.957251685 0.935861784 1.066213686 1.114070239 1.14769406 1.130474216 1.244520839 1.121358836 1 10.94039977 -5.925863709 1.70888078 1.143286782 0.924028103 0.686571683 0.058117424 0.188593476 1.118562919 0.018353445 0.032775236 1.19E-06 5.925863709 -0.219258678 VLTANSNPSS(ph)PSAAKR ddPTM_A459_MK2206_30min_R2 2 VLTANSNPSSPSAAKR 16 1 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANSNPS(0.396)S(0.599)PS(0.005)AAKR;VLTANSNPS(0.375)S(0.625)PSAAKR 123.76 0.0022574 52571000 61033 101929 87091 89171 108640 100696 113826 92188 113654 111427 TRUE FALSE 65705.73341 96867.35408 89994.57047 81885.44406 104374.2477 104528.0568 98880.50947 104237.2881 123539.4195 107791.1461 0.609565217 0.898657799 0.834897612 0.759667626 0.968300751 0.969727669 0.917334243 0.967030149 1.146099879 1 16.71787916 -3.385117658 0.262918564 1.056973666 2.51E-09 0.650575437 0.082049524 13.0059929 0.418604612 0.104981298 5.05892898 0.000411986 3.385117658 -1.056973663 VLTLS(ph)DDLER ddPTM_A459_MK2206_30min_R1 1 VLTLSDDLER 10 0 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 1 VLT(0.012)LS(0.988)DDLER 105.2 0.012654 3694400 1337.6 1072.5 1142.2 1045.8 1093.9 1304.4 1206.3 1046.1 1208.5 1148.6 TRUE FALSE 1223.830096 1002.680055 1064.670646 1126.347697 1050.327647 1378.254001 1125.829928 1036.954058 1334.1279 1290.897239 0.948046102 0.776731117 0.824752439 0.872530874 0.813641562 1.067671352 0.872129782 0.803281645 1.033488847 1 10.33415845 VLTLSERPLDFLDLERPPTTPQNEEIR ddPTM_A459_MK2206_30min_R1 1 VLTLSERPLDFLDLERPPTTPQNEEIR 27 2 A0A0A0MS29;Q9GZY8-2;C9JHF5;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8-5 MFF Mitochondrial fission factor 0 79.94 6.71E-05 3752500 775.13 707.48 544.35 629.23 781.07 590.14 680.15 499.78 527.31 429.37 FALSE TRUE 709.2011231 661.4229234 507.4010386 677.6934036 749.958328 623.5532168 634.7784345 495.4104762 582.1257615 482.5635972 1.469653176 1.37064405 1.051469779 1.404360809 1.554112934 1.292167956 1.315429589 1.026622147 1.20631926 1 8.914575278 -7.688036091 5.614929826 1.087985048 1.350347796 0.469257164 0.133391744 0.197102924 10.8562638 0.068291416 0.038196796 2.05E-08 7.688036091 0.262362748 VMEHFIK ddPTM_A459_MK2206_30min_R2 1 VMEHFIK 7 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 91.9 0.03896 3916400 52692 63993 57305 66669 57860 60242 65574 49652 51349 60342 FALSE TRUE 56726.14003 60815.20067 59215.5201 61221.92944 55588.12568 62534.55152 56964.05503 56141.68688 55815.2432 58373.04548 0.971786542 1.041837036 1.014432597 1.048804785 0.952290997 1.07129157 0.97586231 0.961774162 0.956181791 1 15.83301472 -7.49135978 24.95126852 0.969150416 1.016910416 0.27149176 0.034623924 753.1772236 596237.0359 0.013573524 0.009140665 3.23E-08 7.49135978 0.04776 VMFMTAEPQARSY(ph)PR ddPTM_A459_MK2206_30min_R1 1 VMFMTAEPQARSYPR 15 1 Q9HCN6-3 Q9HCN6-3 1 VMFMTAEPQARS(0.002)Y(0.998)PR 96.756 0.0056311 0 462.06 544.4 629.06 230.61 486.89 391.63 395.51 398.71 551.44 326.72 TRUE FALSE 422.7593706 508.9594611 586.3611599 248.3716222 467.4961403 413.8037522 369.1262495 395.2241205 608.7641613 367.1965402 1.151316323 1.386068237 1.596859163 0.67639968 1.273149633 1.126927154 1.005255249 1.076328552 1.65787009 1 8.520408655 -5.712703434 24.99999984 1.122055135 1.37887925 0.183398694 0.252694313 200.5136824 102855.4828 0.067299846 0.116566461 1.94E-06 5.712703434 0.256824115 VMGSLMHPS(ph)DLRAK ddPTM_A459_MK2206_30min_R2 1 VMGSLMHPSDLRAK 14 1 Q9Y2G1-2;Q9Y2G1 Q9Y2G1-2 MYRF "Myelin regulatory factor;Myelin regulatory factor, N-terminal;Myelin regulatory factor, C-terminal" 1 VMGS(0.003)LMHPS(0.997)DLRAK 78.287 0.035181 13268000 44372 47814 42852 38930 42107 30835 49437 34287 30719 42237 TRUE FALSE 47769.15444 45439.62629 44280.66429 35749.29447 40453.66761 32008.44753 42945.86252 38768.42862 33390.88309 40858.81015 1.169127399 1.112113302 1.083748257 0.874947027 0.990084328 0.783391572 1.051079617 0.948838904 0.817226027 1 15.31835957 -5.638005292 4.481403075 0.924032558 1.131583858 0.571906044 0.07922161 0.149192389 5.114330251 0.021229727 0.037967003 2.30E-06 5.638005292 0.2075513 VMIGS(ph)PK ddPTM_A459_MK2206_30min_R2 1 VMIGSPK 7 0 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 VMIGS(1)PK 79.986 0.045736 95137000 460470 440910 484180 376530 480900 329520 519040 370270 314030 500940 TRUE FALSE 495723.9372 419015.0505 500322.3195 345766.2945 462017.4497 342060.1145 450889.4245 418665.5603 341343.7618 484594.3688 1.022966772 0.864671729 1.032455909 0.713516947 0.953410686 0.705868942 0.930447099 0.863950527 0.70439069 1 18.88641811 -5.745999505 24.99939296 0.836184641 0.962495477 0.242150583 0.108514399 349.9460826 566608.7785 0.027327573 0.047113909 1.79E-06 5.745999505 0.126310836 VMIYQDEVKLPAKLS(ph)ISK ddPTM_A459_MK2206_30min_R1 1 VMIYQDEVKLPAKLSISK 18 2 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 VMIYQDEVKLPAKLS(0.944)IS(0.056)K 58.712 0.021741 13850000 2560.8 2931.7 2783.2 3363.6 2996.1 2092.6 2395.8 3110.3 1634.7 1006 TRUE FALSE 2342.990513 2740.845797 2594.284138 3622.665055 2876.758993 2211.081204 2235.980553 3083.106975 1804.632915 1130.630875 2.072285982 2.424173847 2.294545635 3.204109436 2.544383898 1.955617216 1.977639743 2.726890839 1.596129165 1 10.14291228 -8.484781977 3.965863844 1.004338973 2.396946877 0.622217967 0.357845459 0.128377106 4.676864629 0.365469765 0.095902099 3.28E-09 8.484781977 1.392607904 VMLADS(ph)PR ddPTM_A459_MK2206_30min_R2 1 VMLADSPR 8 0 H7BZE0;H7C476;Q8IUH3-3;Q8IUH3 H7BZE0 RBM45 RNA-binding protein 45 1 VMLADS(1)PR 86.882 0.035509 0 18382 34002 21697 58656 40473 123250 22241 22459 64256 19033 TRUE FALSE 19789.34005 32313.51012 22420.36715 53863.61717 38883.82666 127940.3651 19320.72998 25394.46841 69844.87073 18411.95477 1.074809291 1.755028759 1.217707051 2.925469775 2.111879328 6.94876599 1.049357889 1.37923804 3.793452222 1 14.16835518 -5.763480973 24.89587832 2.838072259 1.389766209 0.128263701 1.652693986 104.8711387 1278862.748 0.465198414 0.73064681 1.72E-06 5.763480973 -1.44830605 VMLGETNPADS(ph)KPGTIR ddPTM_A459_MK2206_30min_R1 2 VMLGETNPADSKPGTIR 17 1 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;O60361;P15531;P15531-2 Q32Q12;P15531 NME1-NME2;NME2;NME1;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase A 1 VMLGETNPADS(0.875)KPGT(0.125)IR;VMLGET(0.001)NPADS(0.943)KPGT(0.056)IR 83.167 0.0074643 30257000 2417.6 2813.4 2913.1 2517 2527.5 2336.6 2203.6 2080.85 2154.39 2046.21 TRUE FALSE 2211.970425 2630.247149 2715.366888 2710.859776 2426.824323 2468.896273 2056.601865 2062.657348 2378.34655 2299.709943 0.961847572 1.143729955 1.180743205 1.178783344 1.055274092 1.073568552 0.894287504 0.896920655 1.034194141 1 11.16723619 -7.06993195 3.28689944 0.948359392 1.11302002 0.478829793 0.072407442 0.211477949 4.454679578 0.030097337 0.023393746 8.51E-08 7.06993195 0.164660628 VMLGETNPADS(ph)KPGTIR ddPTM_A459_MK2206_30min_R2 1 VMLGETNPADSKPGTIR 17 1 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;O60361;P15531;P15531-2 Q32Q12;P15531 NME1-NME2;NME2;NME1;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase A 1 VMLGETNPADS(0.963)KPGT(0.037)IR 74.029 0.013068 11864000 17186 14390 17486 11571 15125 12849 21716 15455 10782 15484 TRUE FALSE 18501.77337 13675.41353 18068.97451 10625.61229 14531.1165 13337.9777 18864.66311 17475.02156 11719.79887 14978.75835 1.235200739 0.912987125 1.206306564 0.709378711 0.97011489 0.890459502 1.259427696 1.166653548 0.782427929 1 13.87063042 -4.74830964 24.26689111 0.996737781 1.235201578 0.157585092 0.17009676 895.4586686 1654877.475 0.042384694 0.751567339 1.79E-05 4.74830964 0.238463796 VMLGETNPADSKPGTIR ddPTM_A459_MK2206_30min_R2 2 VMLGETNPADSKPGTIR 17 1 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;O60361;P15531;P15531-2 Q32Q12;P15531 NME1-NME2;NME2;NME1;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase A 0 ; 139.34 0.0014278 31686000 63114 75061 67009 70661 77164 78107 62322 57998 61755 68731 FALSE TRUE 67946.05637 71333.57989 69243.04662 64887.77027 74134.15364 81079.41662 54139.04654 65578.53774 67126.33827 66488.3131 1.021924805 1.072873962 1.041431846 0.975927456 1.114995255 1.219453658 0.814264102 0.986316763 1.00959605 1 16.02081315 -7.264985131 24.99854085 0.95140397 1.070229518 0.363997951 0.078808945 379.0556453 2672428.101 0.033162643 0.023359769 5.43E-08 7.264985131 0.118825548 VMMPS(ph)RTNLATGIPS(ph)S(ph)K ddPTM_A459_MK2206_30min_R2 1 VMMPSRTNLATGIPSSK 17 1 Q96A57-2 Q96A57-2 TMEM230 Transmembrane protein 230 3 VMMPS(0.437)RT(0.282)NLAT(0.282)GIPS(1)S(1)K 69.979 0.023018 0 3848 4719.3 6103 5784.6 5807.3 3769.4 5334.5 3219.3 5185.4 4103.9 TRUE FALSE 4142.605839 4484.946425 6306.470974 5311.979676 5579.276223 3912.847158 4634.073742 3640.073564 5636.416719 3969.990079 1.043480149 1.12971225 1.588535701 1.338033489 1.405362762 0.985606281 1.1672759 0.916897395 1.41975587 1 11.95491969 -6.758881424 24.99999425 1.097048726 1.309536362 0.22484456 0.188234499 105.6872672 1032929.7 0.064415978 0.06161721 1.74E-07 6.758881424 0.212487636 VMPT(ph)KSPPPPGGGNLGMNSR ddPTM_A459_MK2206_30min_R1 1 VMPTKSPPPPGGGNLGMNSR 20 1 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3 MEF2A Myocyte-specific enhancer factor 2A 1 VMPT(0.746)KS(0.254)PPPPGGGNLGMNSR 88.637 0.0027015 19475000 2016.1 2181.8 2718.7 2085.1 2517.7 1837.2 1984.5 2504.6 1711.3 1463.3 TRUE FALSE 1844.620108 2039.764423 2534.162219 2245.694763 2417.414678 1941.220676 1852.117626 2482.702546 1889.195759 1644.584651 1.121632813 1.240291536 1.540913213 1.365508769 1.469924139 1.180371393 1.126191725 1.509622837 1.148737316 1 10.68350755 -6.784163656 24.98229081 1.220661504 1.353418103 0.174889578 0.162267502 506.3770793 556689.6592 0.058386507 0.051525459 1.64E-07 6.784163656 0.1327566 VMPT(ph)KSPPPPGGGNLGMNSR ddPTM_A459_MK2206_30min_R2 2 VMPTKSPPPPGGGNLGMNSR 20 1 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3 MEF2A Myocyte-specific enhancer factor 2A 1 VMPT(0.5)KS(0.5)PPPPGGGNLGMNSR;VMPT(0.981)KS(0.019)PPPPGGGNLGMNSR 74.726 0.0088045 19080900 42446 60159 52204 56927 77771 56988 59042 36747 56711 63069 TRUE FALSE 45695.6984 57171.59154 53944.4553 52275.882 74717.31977 59156.71827 51289.71448 41549.95907 61643.62027 61011.0637 0.748973967 0.937069247 0.884174968 0.856826268 1.224651977 0.969606407 0.840662519 0.681023351 1.010367899 1 15.89678326 -4.759444196 24.13969043 0.92719043 0.748973629 0.146051815 0.133224083 75.83445863 917140.754 0.035020175 0.221172517 1.74E-05 4.759444196 -0.178216801 VMS(ph)PENFPTASVEGK ddPTM_A459_MK2206_30min_R1 4 VMSPENFPTASVEGK 15 0 H3BRU9;H3BSP3;H3BTW3;Q3L8U1-2;Q3L8U1-3;Q3L8U1 H3BRU9 CHD9 Chromodomain-helicase-DNA-binding protein 9 1 VMS(1)PENFPTASVEGK;VMS(1)PENFPTASVEGK;VMS(1)PENFPTASVEGK;VMS(1)PENFPTASVEGK 253.1 2.62E-28 37712400 10113.9 9545 9592.5 7577.8 8247.2 7971.2 8839.8 8418.7 8260.7 7466.4 TRUE FALSE 9253.659695 8923.618765 8941.387826 8161.443469 7918.69656 8422.522455 8250.113071 8345.096193 9119.429326 8391.394 1.102755954 1.063425072 1.065542605 0.972596862 0.943668783 1.003709569 0.983163592 0.994482704 1.08675976 1 13.03469478 -5.673781508 5.585912941 0.995050544 1.078208049 0.512101409 0.035607123 0.170761386 8.440546065 0.010125917 0.017697859 2.12E-06 5.673781508 0.083157505 VMS(ph)PENFPTASVEGK ddPTM_A459_MK2206_30min_R2 7 VMSPENFPTASVEGK 15 0 H3BRU9;H3BSP3;H3BTW3;Q3L8U1-2;Q3L8U1-3;Q3L8U1 H3BRU9 CHD9 Chromodomain-helicase-DNA-binding protein 9 1 VMS(0.988)PENFPT(0.008)AS(0.005)VEGK;VMS(1)PENFPTASVEGK;VMS(1)PENFPTASVEGK;VMS(1)PENFPTASVEGK;VMS(1)PENFPTASVEGK;VMS(1)PENFPTASVEGK;VMS(1)PENFPTASVEGK 193.54 3.13E-05 39350900 162670 172487 170084 182998 168380 159603 176248 142358 143584 172207 TRUE FALSE 175124.1403 163921.5464 175754.5157 168046.478 161768.5552 165676.804 153106.4259 160964.6794 156072.6768 166587.8997 1.05124166 0.983994316 1.055025701 1.008755608 0.971070261 0.994530841 0.919072911 0.966244725 0.936878831 1 17.34592409 -6.401670952 1.450567233 0.956017321 1.026888559 0.514571601 0.02893307 0.314577892 1.339357154 0.010908219 0.013387061 3.97E-07 6.401670952 0.070871238 VMT(ph)IIES(ph)EMGVVAGIS(ph)FGVACFQDI ddPTM_A459_MK2206_30min_R2 1 VMTIIESEMGVVAGISFGVACFQDI 25 0 A0A087WZU5 A0A087WZU5 TSPAN6 3 VMT(1)IIES(1)EMGVVAGIS(1)FGVACFQDI 44.863 0.042877 0 5679.4 14276 11584 23451 16917 22479 15153 16162 21076 8975.5 TRUE FALSE 6114.219231 13567.0746 11970.20478 21534.97828 16252.75358 23334.4541 13163.3929 18274.42889 22909.15238 8682.63017 0.704189757 1.56255355 1.378638102 2.480236733 1.871869844 2.687486814 1.51606053 2.104711192 2.638503764 1 13.08391642 -4.772721515 1.085213772 2.072319509 0.083851688 0.363509269 0.517435522 1.787764291 1.698383788 0.155685999 4.13905125 1.69E-05 4.772721515 -1.98846782 VMTIPYQPMPAS(ph)SPVICAGGQDR ddPTM_A459_MK2206_30min_R2 3 VMTIPYQPMPASSPVICAGGQDR 23 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 VMTIPYQPMPAS(0.591)S(0.408)PVICAGGQDR;VMTIPY(0.001)QPMPAS(0.5)S(0.5)PVICAGGQDR;VMTIPYQPMPAS(0.623)S(0.377)PVICAGGQDR 117.03 2.02E-05 16707900 67838 82870 70662 93034 88786 80365 89829 68161 75048 80741 TRUE FALSE 73031.72944 78754.7963 73017.83581 85432.8246 85299.81553 83423.34639 78034.3444 77069.87673 81575.53938 78106.42778 0.935028416 1.00830109 0.934850535 1.093800178 1.092097257 1.068072741 0.999077113 0.986728992 1.044415187 1 16.25315366 -5.750900642 24.99978952 1.041606274 0.964284117 0.459552751 0.040240495 217.9008484 516895.0267 0.011884408 0.020309671 1.77E-06 5.750900642 -0.077322157 VMTIPYQPMPASS(ph)PVICAGGQDR ddPTM_A459_MK2206_30min_R1 2 VMTIPYQPMPASSPVICAGGQDR 23 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 VMTIPYQPMPAS(0.289)S(0.711)PVICAGGQDR;VMTIPYQPMPAS(0.398)S(0.602)PVICAGGQDR 135.1 3.82E-06 110329000 10170.7 10205.7 9702.8 9307.3 11165.8 9534.9 10789 9498.3 9825.4 8481.5 TRUE FALSE 9305.628557 9541.307075 9044.20097 10024.14986 10721.04254 10074.7578 10069.2855 9415.257364 10846.78549 9532.252252 0.976225588 1.000949914 0.948800003 1.051603503 1.124712425 1.05691263 1.056338547 0.987726417 1.13790374 1 13.21860141 -5.83719741 6.839506481 1.061865971 0.978150227 0.418617008 0.045330953 0.202901734 14.88490968 0.012476747 0.018703078 1.45E-06 5.83719741 -0.083715744 VMTIPYQPMPASS(ph)PVICAGGQDR ddPTM_A459_MK2206_30min_R2 2 VMTIPYQPMPASSPVICAGGQDR 23 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 VMTIPYQPMPAS(0.108)S(0.892)PVICAGGQDR;VMTIPYQPMPAS(0.405)S(0.595)PVICAGGQDR 128.18 5.86E-06 44718000 144663 165348 150467 177570 157543 162685 186553 132767 147503 166455 TRUE FALSE 155738.5105 157137.0588 155483.4947 163061.963 151357.0702 168876.0917 162058.367 150120.1028 160332.5443 161023.587 0.967178247 0.975863609 0.965594529 1.012658866 0.939968318 1.048766177 1.006426264 0.932286416 0.995708438 1 17.29691251 -5.668313773 22.96824359 0.988977183 0.970176391 0.08260631 0.032070151 29.41764049 7235.509122 0.008788852 0.015222725 2.15E-06 5.668313773 -0.018800792 VMVLDFVTPTPLGTR ddPTM_A459_MK2206_30min_R1 1 VMVLDFVTPTPLGTR 15 0 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;E9PKD3;A0A0B4J225;E9PIZ5;E9PLT3;E9PKI4;E9PQI3 Q16881 TXNRD1 "Thioredoxin reductase 1, cytoplasmic" 0 124.6 0.017746 0 425.75 546.17 743.95 472.57 461.99 545.97 640.62 573.99 411.89 501.52 FALSE TRUE 389.5377268 510.6142337 693.4527468 508.9674233 443.58796 576.8823496 597.8854087 568.9716659 454.7074395 563.6520839 0.691096047 0.905903213 1.230285076 0.902981534 0.786988947 1.023472397 1.06073485 1.009437705 0.806716506 1 9.138661119 VNASASS(ph)LK ddPTM_A459_MK2206_30min_R1 1 VNASASSLK 9 0 Q16658 Q16658 FSCN1 Fascin 1 VNAS(0.003)AS(0.03)S(0.968)LK 115.91 0.0080154 11922000 5311.3 6338.1 6734.8 5018.2 4242.9 4117.3 5035.7 4807.4 4932.9 5038.4 TRUE FALSE 4859.546044 5925.488538 6277.66054 5404.702634 4073.896309 4350.417968 4699.777641 4765.369409 5445.692608 5662.59503 0.858183575 1.04642633 1.108619018 0.954456853 0.719439813 0.76827284 0.829968878 0.841552218 0.961695579 1 12.46724764 -6.012139936 24.38180735 0.839839923 1.012432427 0.330233064 0.097169238 429.6552872 862921.922 0.028432625 0.03881042 9.72E-07 6.012139936 0.172592504 VNASASS(ph)LK ddPTM_A459_MK2206_30min_R2 1 VNASASSLK 9 0 Q16658 Q16658 FSCN1 Fascin 1 VNASAS(0.089)S(0.911)LK 141.1 0.0022363 12664000 111740 103320 107900 97189 87088 82888 109370 87703 85983 112280 TRUE FALSE 120294.9003 98189.27904 111497.3321 89248.34781 83668.48754 86042.36092 95009.58762 99166.08323 93461.64592 108616.3128 1.107521487 0.904001218 1.026524739 0.821684566 0.770312354 0.792167942 0.874726689 0.912994381 0.860475222 1 16.72888127 -4.137358229 0.891943471 0.860021041 1.606148274 0.435253336 0.077204567 5.72304205 1.576668963 0.026974068 5.478283936 7.29E-05 4.137358229 0.746127233 VNASASS(ph)LKK ddPTM_A459_MK2206_30min_R2 1 VNASASSLKK 10 1 Q16658 Q16658 FSCN1 Fascin 1 VNASAS(0.066)S(0.934)LKK 139.74 0.0057046 0 17876 22587 21131 22219 18790 15342 21792 18783 15929 20177 TRUE FALSE 19244.6003 21465.36242 21835.49699 20403.63662 18052.21019 15925.85056 18930.68422 21238.00259 17314.47563 19518.62614 0.985960803 1.099737362 1.118700509 1.045341843 0.924870944 0.815930919 0.969877905 1.08808901 0.887074505 1 14.25256389 -6.158428792 4.771858312 0.9468564 1.072375985 0.365948138 0.074194756 0.25815472 9.418864232 0.023500259 0.030709542 6.94E-07 6.158428792 0.125519585 VNDAEPGS(ph)PEAPQGK ddPTM_A459_MK2206_30min_R1 6 VNDAEPGSPEAPQGK 15 0 Q8N8A6 Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 1 VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK 254.59 1.44E-28 359622100 56855.8 59633.7 59106.8 49085.6 48861 46632.8 54808.6 52545.3 52133.7 51794.1 TRUE FALSE 52019.91565 55751.53529 55094.7951 52866.18142 46914.76291 49273.10884 51152.4183 52085.90198 57553.18468 58210.74413 0.89364801 0.957753352 0.946471239 0.908185975 0.805946799 0.846460728 0.878745308 0.894781586 0.988703813 1 15.82899784 -8.275259933 4.575355336 0.998288128 0.890944705 0.496705929 0.041491433 0.189333398 10.43230093 0.042127586 0.01226484 5.31E-09 8.275259933 -0.107343423 VNDAEPGS(ph)PEAPQGK ddPTM_A459_MK2206_30min_R2 6 VNDAEPGSPEAPQGK 15 0 Q8N8A6 Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 1 VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK 204.71 5.57E-06 611295000 647687 690112 644074 710596 675532 549887 756931 544036 542702 702088 TRUE FALSE 697274.4147 655842.0416 665547.1057 652538.0337 649007.2194 570813.3351 657545.0505 615143.3732 589905.239 679178.9261 1.026643183 0.965639563 0.97992897 0.960774854 0.955576203 0.840446182 0.968147016 0.905716225 0.868556453 1 19.37343217 -6.282423236 2.202427763 0.913779009 0.985944752 0.311852277 0.045817369 0.365656839 3.483472659 0.014925752 0.018901031 5.22E-07 6.282423236 0.072165743 VNEEKDGPIS(ph)PK ddPTM_A459_MK2206_30min_R1 1 VNEEKDGPISPK 12 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 VNEEKDGPIS(1)PK 116.58 0.023629 8206400 2874.1 4184.1 3713.3 3215.2 2123.2 1770.7 2300.5 2962.7 3449.1 3080.9 TRUE FALSE 2629.642702 3911.71433 3461.251542 3462.835261 2038.628448 1870.955504 2147.037842 2936.797426 3807.646288 3462.585152 0.75944492 1.129709208 0.999614851 1.000072232 0.58875908 0.540334872 0.620067882 0.848151684 1.099654195 1 11.75763383 -6.232882153 23.98691513 0.75497287 0.985417764 0.186669282 0.187542458 657.6346475 552385.6152 0.058257539 0.075191804 5.85E-07 6.232882153 0.230444894 VNFPENGFLS(ph)PDKLSLLEK ddPTM_A459_MK2206_30min_R1 2 VNFPENGFLSPDKLSLLEK 19 1 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 1 VNFPENGFLS(0.988)PDKLS(0.012)LLEK;VNFPENGFLS(0.993)PDKLS(0.007)LLEK 90.778 0.0014396 37332800 6513.4 7725.77 8289.97 7476.4 4702.63 4914.79 5270 6023.54 6485.99 5919.27 TRUE FALSE 5959.401127 7222.820969 7727.269934 8052.233623 4515.314289 5193.061163 4918.447916 5970.876825 7160.231871 6652.593856 0.895801135 1.085715005 1.161542415 1.210390082 0.678729889 0.780606975 0.73932785 0.897526131 1.07630678 1 12.69970124 -6.254145695 24.99784255 0.84674769 1.093400236 0.402279202 0.134290798 572.8678065 1963403.7 0.041952627 0.053054654 5.57E-07 6.254145695 0.246652546 VNFPENGFLS(ph)PDKLSLLEK ddPTM_A459_MK2206_30min_R2 2 VNFPENGFLSPDKLSLLEK 19 1 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 1 VNFPENGFLS(0.97)PDKLS(0.03)LLEK;VNFPENGFLS(0.999)PDKLS(0.001)LLEK 75.945 0.0049428 160193000 238016 195841 240627 200052 215491 137696 270509 198149 182999 233450 TRUE FALSE 256238.688 186115.8207 248649.3841 183707.1117 207029.7406 142936.1178 234990.8434 224047.7546 198915.9222 225832.5456 1.134640214 0.82413197 1.101034323 0.813466062 0.916740056 0.632929666 1.040553489 0.992096839 0.880811584 1 17.78489389 -4.747504591 24.85071624 0.909441017 1.134640824 0.216070985 0.127574168 1067.442329 1903513.479 0.031273395 0.628753591 1.79E-05 4.747504591 0.225199807 VNFPENGFLSPDKLS(ph)LLEK ddPTM_A459_MK2206_30min_R1 1 VNFPENGFLSPDKLSLLEK 19 1 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 1 VNFPENGFLS(0.243)PDKLS(0.757)LLEK 66.809 0.011984 75943000 5161.5 6033.5 6435.7 5826.1 4382 4051 4485.4 4993.5 5884.7 4748.4 TRUE FALSE 4722.487321 5640.718053 5998.862615 6274.827231 4207.455661 4280.364119 4186.18715 4949.842356 6496.435624 5336.667641 0.88491314 1.056973833 1.124083983 1.175795019 0.788405039 0.802066834 0.784419685 0.927515575 1.217320632 1 12.38172345 -4.704672163 21.66397397 0.97600082 0.884903391 0.034568263 0.152221401 21859.20955 8337844.756 0.041684908 48.08645291 1.97E-05 4.704672163 -0.091097429 VNFSEEGET(ph)EEDDQDSSHSSVTTVK ddPTM_A459_MK2206_30min_R2 1 VNFSEEGETEEDDQDSSHSSVTTVK 25 0 A0A0A0MSK5;J3KN66;Q5JTV8;Q5JTV8-3;H0YD16;Q5JTV8-2 A0A0A0MSK5 TOR1AIP1 Torsin-1A-interacting protein 1 1 VNFS(0.222)EEGET(0.775)EEDDQDS(0.001)S(0.001)HSSVTTVK 56.972 0.01507 7137200 7377.1 16152 14561 30151 19745 44823 37105 13731 35404 16470 TRUE FALSE 7941.896448 15349.91517 15046.45647 27687.56685 18969.71209 46528.77067 32233.06893 15525.68885 38483.37592 15932.58525 0.498468787 0.963429031 0.944382612 1.737794992 1.190623605 2.920352846 2.023090944 0.97446137 2.415388044 1 13.95969276 -5.658053005 1.344943778 1.835000838 0.63126114 0.353581946 0.590603032 0.52815147 1.851278776 0.195503967 0.556243739 2.20E-06 5.658053005 -1.203739697 VNFSEEGETEEDDQDS(ph)SHSSVTTVK ddPTM_A459_MK2206_30min_R1 1 VNFSEEGETEEDDQDSSHSSVTTVK 25 0 A0A0A0MSK5;J3KN66;Q5JTV8;Q5JTV8-3;H0YD16;Q5JTV8-2 A0A0A0MSK5 TOR1AIP1 Torsin-1A-interacting protein 1 1 VNFS(0.007)EEGET(0.14)EEDDQDS(0.781)S(0.064)HS(0.007)S(0.002)VTTVK 89.622 3.71E-05 8265700 1904.3 744.58 810.83 430.21 2504.1 2381.6 1934.5 1408.1 698.19 516.85 TRUE FALSE 1742.329285 696.1077067 755.7931187 463.3448487 2404.356394 2516.444134 1805.453035 1395.78913 770.769349 580.88128 2.999458487 1.198364848 1.301114608 0.797658428 4.139152831 4.332114359 3.108127421 2.402881928 1.32689652 1 9.182099527 -6.247432956 24.99018417 2.888532201 1.527804933 0.18778831 1.131199304 1217.899524 2172969.392 0.349234161 0.448597102 5.66E-07 6.247432956 -1.360727269 VNGDAS(ph)PAAAESGAK ddPTM_A459_MK2206_30min_R1 5 VNGDASPAAAESGAK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 VNGDAS(1)PAAAESGAK;VNGDAS(0.6)PAAAES(0.4)GAK;VNGDAS(1)PAAAESGAK;VNGDAS(0.999)PAAAES(0.001)GAK;VNGDAS(0.999)PAAAES(0.001)GAK 214.63 2.80E-07 171311100 26773.8 28594.3 27376.4 20872.5 22673.2 20362.8 26571.4 23013 26403.8 27706.7 TRUE FALSE 24496.54772 26732.80587 25518.16624 22480.10357 21770.07843 21515.72414 24798.87039 22811.79977 29148.5695 31139.21517 0.786678392 0.858493245 0.819486493 0.721922612 0.699120974 0.690952679 0.796387136 0.732574654 0.936072709 1 14.92644496 -8.386860271 3.811253389 0.996897584 0.763472981 0.721814234 0.051419688 0.130989569 3.141538821 0.05571737 0.014754305 4.10E-09 8.386860271 -0.233424603 VNGDAS(ph)PAAAESGAK ddPTM_A459_MK2206_30min_R2 5 VNGDASPAAAESGAK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 VNGDAS(1)PAAAESGAK;VNGDAS(1)PAAAESGAK;VNGDAS(1)PAAAESGAK;VNGDAS(1)PAAAESGAK;VNGDAS(0.999)PAAAES(0.001)GAK 213.36 5.55E-07 266208700 347966 325641 318638 336476 286949 236661 365037 265674 229872 333146 TRUE FALSE 374606.5445 309470.1415 329261.2319 308984.8345 275681.9405 245667.3002 317107.2034 300398.504 249865.851 322275.4733 1.162379937 0.960265882 1.021676358 0.958760005 0.855423274 0.762289782 0.983963192 0.932117176 0.775317614 1 18.29793487 -1.522879549 0.589424529 0.885265585 16.43097985 0.482806593 0.081465798 142.0284906 1.141771009 0.03796904 2834.334237 0.029999944 1.522879549 15.54571427 VNGDDHHEEDMDMS(ph)D ddPTM_A459_MK2206_30min_R2 2 VNGDDHHEEDMDMSD 15 0 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D 125.36 0.0012365 85644000 525560 571060 567980 666360 669360 600360 547830 506580 538500 549870 TRUE FALSE 565797.2777 542701.9908 586916.1697 611916.2564 643077.5631 623207.1205 475899.2629 572791.7453 585337.7566 531927.7869 1.063673099 1.020255012 1.103375654 1.150374678 1.208956514 1.171600988 0.894668928 1.07682238 1.100408309 1 19.02087088 -7.22160375 24.99743585 1.024376524 1.119894073 0.326720538 0.071306447 734.4951793 460907.0605 0.029778515 0.023066076 6.00E-08 7.22160375 0.095517549 VNGTS(ph)SPQSPLSTSGR ddPTM_A459_MK2206_30min_R2 1 VNGTSSPQSPLSTSGR 16 0 Q96KQ4;A0A3B3ISJ2 Q96KQ4 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 VNGT(0.015)S(0.759)S(0.225)PQSPLSTSGR 89.466 0.013132 4147600 15221 15516 17915 19120 14368 18149 21398 12427 14887 18597 TRUE FALSE 16386.33146 14745.498 18512.27716 17557.83484 13803.84013 18839.67291 18588.4169 14051.25157 16181.84435 17990.18141 0.910848595 0.819641429 1.02902115 0.975967637 0.767298551 1.047219729 1.033253444 0.781051133 0.899482 1 14.13492211 VNHEPEPAGGATPGATLPKS(ph)PSQLR ddPTM_A459_MK2206_30min_R1 4 VNHEPEPAGGATPGATLPKSPSQLR 25 1 O00499-6;O00499-11;O00499-2;O00499 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 VNHEPEPAGGAT(0.001)PGAT(0.102)LPKS(0.647)PS(0.249)QLR;VNHEPEPAGGATPGAT(0.003)LPKS(0.723)PS(0.274)QLR;VNHEPEPAGGATPGAT(0.012)LPKS(0.753)PS(0.235)QLR;VNHEPEPAGGAT(0.081)PGAT(0.057)LPKS(0.683)PS(0.179)QLR 171.14 1.10E-16 141545000 17263.1 16726.4 18024.6 18188.4 18453.8 15700 14666.6 17071.3 12240.6 9052.9 TRUE FALSE 15794.78269 15637.50832 16801.14037 19589.27372 17718.74607 16588.92043 13688.21787 16922.04742 13513.05417 10174.4416 1.552397991 1.536940202 1.65130835 1.925341409 1.741495678 1.630450209 1.345353231 1.66319176 1.32813718 1 13.312662 -8.677825871 0.681554474 0.993725747 1.673528806 0.678252766 0.138861617 0.600191852 0.60415733 0.15344249 0.05914195 2.10E-09 8.677825871 0.679803059 VNHEPEPAGGATPGATLPKS(ph)PSQLR ddPTM_A459_MK2206_30min_R2 5 VNHEPEPAGGATPGATLPKSPSQLR 25 1 O00499-6;O00499-11;O00499-2;O00499 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 VNHEPEPAGGATPGAT(0.049)LPKS(0.697)PS(0.253)QLR;VNHEPEPAGGATPGATLPKS(0.758)PS(0.241)QLR;VNHEPEPAGGATPGAT(0.008)LPKS(0.755)PS(0.237)QLR;VNHEPEPAGGATPGAT(0.005)LPKS(0.735)PS(0.26)QLR;VNHEPEPAGGATPGAT(0.087)LPKS(0.642)PS(0.271)QLR 158.33 2.69E-13 212977000 193318.5 400908 332311 417215 480078 410809 409673 316816.7 418099 302912 TRUE FALSE 208119.113 380999.4917 343390.0829 383127.1999 461227.7255 426442.6244 355882.443 358225.7305 454464.4953 293028.0062 0.710236252 1.300215282 1.171867793 1.30747639 1.574005609 1.455296474 1.214499759 1.222496563 1.550925118 1 18.16067903 -4.489798355 1.913399317 1.333574946 6.09E-18 0.522608829 0.170013347 1.774520299 3.379071184 0.045210574 5.517628382 3.24E-05 4.489798355 -1.333574946 VNIS(ph)PTISSESK ddPTM_A459_MK2206_30min_R1 2 VNISPTISSESK 12 0 Q8TAT5 Q8TAT5 NEIL3 Endonuclease 8-like 3 1 VNIS(0.892)PT(0.077)IS(0.023)S(0.007)ES(0.002)K;VNIS(0.743)PT(0.193)IS(0.05)S(0.013)ESK 183.06 0.00010427 37416000 9594 8942.4 8975.6 8058 7790.7 7139.7 7900.7 7672.5 6302.7 6470.9 TRUE FALSE 8777.97992 8360.248135 8366.361279 8678.628556 7480.379922 7543.943644 7373.658719 7605.420141 6957.888219 7272.563945 1.206999345 1.149559935 1.150400511 1.193338226 1.028575339 1.037315547 1.013900844 1.045768755 0.956731116 1 12.82824836 -6.291345604 7.06406182 1.016772772 1.171538097 0.886992912 0.028194116 0.066393205 12.30857793 0.008538338 0.009862682 5.11E-07 6.291345604 0.154765325 VNISPT(ph)ISSESK ddPTM_A459_MK2206_30min_R2 2 VNISPTISSESK 12 0 Q8TAT5 Q8TAT5 NEIL3 Endonuclease 8-like 3 1 VNIS(0.219)PT(0.751)IS(0.023)S(0.007)ESK;VNIS(0.284)PT(0.699)IS(0.013)S(0.003)ESK 170.26 0.0007339 23511000 105512 113589 108529 111795 120363 91293 132166 87987 96119 125450 TRUE FALSE 113590.0798 107948.3354 112147.3027 102660.9909 115636.9438 94767.21909 114812.4454 99487.203 104479.2569 121356.5768 0.93600267 0.889513682 0.924113927 0.845945013 0.952869197 0.780898915 0.946075182 0.81979243 0.860927851 1 16.88889277 -5.731110025 24.89247637 0.879965033 0.913840466 0.03693487 0.063432705 617.4279066 506742.0315 0.015940694 0.027605817 1.86E-06 5.731110025 0.033875433 VNLEESSGVENS(ph)PAGAR ddPTM_A459_MK2206_30min_R2 1 VNLEESSGVENSPAGAR 17 0 Q8WVM8-2;Q8WVM8-3;Q8WVM8 Q8WVM8-2 SCFD1 Sec1 family domain-containing protein 1 1 VNLEES(0.001)S(0.005)GVENS(0.994)PAGAR 95.365 0.012043 0 15157 17327 14987 17713 16818 15818 19112 10934 17172 18823 TRUE FALSE 16317.43157 16466.56638 15486.6591 16265.79124 16157.64082 16419.96507 16602.57144 12363.11134 18665.58952 18208.80705 0.896128534 0.904318791 0.850503773 0.893292526 0.887353069 0.901759518 0.911787982 0.678963279 1.025085799 1 14.15234879 -11.01050253 2.706890999 1.004962061 0.878692901 0.156760081 0.080618615 17389061.17 17788279.09 643716.2509 0.018672493 9.76E-12 11.01050253 -0.126269159 VNLEESSGVENS(ph)PAGARPK ddPTM_A459_MK2206_30min_R2 2 VNLEESSGVENSPAGARPK 19 1 Q8WVM8-2;Q8WVM8-3;Q8WVM8 Q8WVM8-2 SCFD1 Sec1 family domain-containing protein 1 1 VNLEESSGVENS(1)PAGARPK;VNLEES(0.001)S(0.007)GVENS(0.991)PAGARPK 157.88 1.27E-05 20010800 100966 135898 111796 128791 113940 116495 128477 97844 104443 128764 TRUE FALSE 108696.0346 129149.5029 115523.2228 118268.3633 109466.1431 120928.2989 111607.8156 110632.5467 113527.2634 124562.4412 0.872622867 1.0368254 0.927432232 0.9494705 0.878805377 0.970824734 0.895998942 0.888169384 0.911408465 1 16.9265096 -5.863650436 2.564721978 0.919642379 0.956416844 0.019748365 0.051852959 0.721585434 9.631088989 0.014724472 0.024659445 1.37E-06 5.863650436 0.036774465 VNLFPGLS(ph)PSALK ddPTM_A459_MK2206_30min_R1 2 VNLFPGLSPSALK 13 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 VNLFPGLS(0.801)PS(0.199)ALK;VNLFPGLS(0.955)PS(0.045)ALK 127.18 0.0019534 53516000 47555 37523 34846 29894 35384 31029 35496 34882 30658 29999 TRUE FALSE 43510.19753 35080.24588 32480.75061 32196.44106 33974.58035 32785.83517 33128.12661 34577.03035 33845.00881 33715.5026 1.290510127 1.040478213 0.963377322 0.954944716 1.007684232 0.972426114 0.982578459 1.025552867 1.003841147 1 15.04112448 -4.765334421 3.284586804 0.988690148 1.338512202 0.950563327 0.020543553 0.071473978 1.169575191 0.005603716 0.065710252 1.72E-05 4.765334421 0.349822054 VNLFPGLS(ph)PSALK ddPTM_A459_MK2206_30min_R2 1 VNLFPGLSPSALK 13 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 VNLFPGLS(0.908)PS(0.092)ALK 96.707 0.013964 105350000 947220 854660 681280 795680 852330 806950 914570 669870 668030 856420 TRUE FALSE 1019739.891 812218.8272 703993.5352 730670.3987 818863.2416 837659.0477 794485.8604 757424.309 726134.0419 828475.0855 1.230863679 0.980378096 0.849746175 0.881946134 0.98839815 1.011085381 0.958973751 0.914239091 0.876470584 1 19.66009879 -4.777017183 4.003635083 0.934464952 1.258541424 0.738540527 0.052463391 0.123651818 3.742130735 0.014227594 0.117059756 1.67E-05 4.777017183 0.324076472 VNLS(ph)PNR ddPTM_A459_MK2206_30min_R2 1 VNLSPNR 7 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 VNLS(1)PNR 81.525 0.042863 58008000 179470 186660 208240 204230 195550 199420 215770 151290 140390 202620 TRUE FALSE 193210.3612 177390.7358 215182.6177 187543.7557 187871.7244 207009.0678 187439.1398 171064.1225 152600.8684 196008.526 0.98572427 0.905015406 1.097822743 0.956814275 0.958487512 1.056122772 0.956280544 0.872738171 0.778541993 1 17.58055688 -7.676034821 4.000478695 0.868523892 0.991718224 0.312875792 0.071298703 0.233886402 7.057785549 0.035574182 0.018960557 2.11E-08 7.676034821 0.123194332 VNLS(ph)PVIR ddPTM_A459_MK2206_30min_R2 1 VNLSPVIR 8 0 Q8IV32 Q8IV32 CCDC71 Coiled-coil domain-containing protein 71 1 VNLS(1)PVIR 94.409 0.022719 1542300 9511.5 11498 8803.1 12452 9727.1 9309.6 12359 9198 8325.5 9981.5 TRUE FALSE 10239.70775 10927.02604 9096.59096 11434.63177 9345.165179 9663.883352 10736.24845 10400.21018 9049.636941 9655.804472 1.060471738 1.131653615 0.942085249 1.184223624 0.967828751 1.000836686 1.111895802 1.077094116 0.937222472 1 13.23718075 -1.522878746 0.082045407 0.94874788 1.303222047 0.08950135 0.07671687 514.6043893 3.081487166 1.952299369 20.6382831 0.03 1.522878746 0.354474168 VNNGNTAPEDS(ph)SPAK ddPTM_A459_MK2206_30min_R1 2 VNNGNTAPEDSSPAK 15 0 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 VNNGNTAPEDS(0.5)S(0.5)PAK;VNNGNTAPEDS(0.5)S(0.5)PAK 198.87 2.06E-05 12841900 4308.6 4878.7 4359.9 3986.4 3258.1 3021.4 3838.8 3579.5 4079.1 4384.2 TRUE FALSE 3942.130945 4561.095743 4063.962135 4293.433219 3128.322978 3192.469057 3582.720656 3548.204809 4503.137042 4927.347795 0.800051287 0.925669535 0.824776798 0.87134771 0.634889825 0.647908203 0.727109351 0.720104396 0.913906878 1 12.26659559 -6.19067824 24.99982939 0.75134258 0.858284648 0.094198632 0.11104322 282.5890981 99837.49506 0.032178251 0.041541941 6.45E-07 6.19067824 0.106942068 VNNGNTAPEDS(ph)SPAK ddPTM_A459_MK2206_30min_R2 2 VNNGNTAPEDSSPAK 15 0 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 VNNGNTAPEDS(0.5)S(0.5)PAK;VNNGNTAPEDS(0.5)S(0.5)PAK 243.99 1.61E-20 23204000 86185 72676 68226 62102 66047 48000 83477 54219 52152 86440 TRUE FALSE 92783.38987 69067.01552 70500.62079 57028.06795 63453.66292 49826.67364 72516.36963 61305.60946 56688.08669 83619.46988 1.109590745 0.82596811 0.843112506 0.681995091 0.758838378 0.595874067 0.86721872 0.733149942 0.677929276 1 16.35155128 -4.075090762 1.203633304 0.749632117 2.356208027 0.464383663 0.108225292 5.656915302 2.04911857 0.030172849 17.18487998 8.41E-05 4.075090762 1.60657591 VNNGNTAPEDSS(ph)PAK ddPTM_A459_MK2206_30min_R1 1 VNNGNTAPEDSSPAK 15 0 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 VNNGNTAPEDS(0.289)S(0.711)PAK 192.54 3.00E-05 9703300 1828.7 2001.2 1851.2 1495.7 1181.6 1150 1539.1 1468.3 1872.9 1392.8 TRUE FALSE 1673.159462 1870.921516 1725.545702 1610.899073 1134.53437 1215.112006 1436.429447 1455.462808 2067.594657 1565.350579 1.068872037 1.195209266 1.102338176 1.029097951 0.72477973 0.776255506 0.917640729 0.929799897 1.320850859 1 10.61227009 -5.92797347 4.055318017 0.927644009 1.127649659 0.204842838 0.152952926 0.328450543 10.64729312 0.046701926 0.070843763 1.18E-06 5.92797347 0.20000565 VNNGNTAPEDSS(ph)PAKK ddPTM_A459_MK2206_30min_R1 3 VNNGNTAPEDSSPAKK 16 1 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 VNNGNTAPEDS(0.209)S(0.791)PAKK;VNNGNTAPEDS(0.059)S(0.941)PAKK;VNNGNTAPEDS(0.122)S(0.878)PAKK 144.15 0.00056016 36986800 11020.82 12743.9 13084.09 11065.15 8522.67 7634.05 9153.75 11298.98 11205.18 10987.89 TRUE FALSE 10083.44139 11914.26979 12195.97843 11917.38977 8183.194007 8066.283314 8543.120039 11200.19421 12369.99856 12349.15277 0.816529002 0.964784388 0.987596368 0.965037035 0.662652261 0.653185159 0.691798069 0.906960536 1.001688034 1 13.59212445 -6.222970475 24.93989782 0.800039735 0.939587257 0.150426565 0.127658474 921.6047239 597488.1564 0.040384254 0.052134978 5.98E-07 6.222970475 0.139547522 VNNGNTAPEDSS(ph)PAKK ddPTM_A459_MK2206_30min_R2 4 VNNGNTAPEDSSPAKK 16 1 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 VNNGNTAPEDS(0.087)S(0.913)PAKK;VNNGNTAPEDS(0.328)S(0.672)PAKK;VNNGNTAPEDS(0.165)S(0.835)PAKK;VNNGNTAPEDS(0.235)S(0.765)PAKK 115.74 0.0010144 84529000 258206 263959 282854 235374 261060 164151 302353 208359 183888 307050 TRUE FALSE 277974.4499 250851.1799 292284.2112 216143.1913 250809.4727 170397.8813 262653.6879 235592.2367 199882.2458 297030.9836 0.93584328 0.844528664 0.984019268 0.72767894 0.844388251 0.573670394 0.884263603 0.79315711 0.672933993 1 18.1802539 -5.767379708 24.99144487 0.774323172 0.913770234 0.224652007 0.114548822 193.1709497 812689.6194 0.030355842 0.046381894 1.71E-06 5.767379708 0.139447063 VNPHKVS(ph)PASSVDSNIPSSQGYK ddPTM_A459_MK2206_30min_R1 1 VNPHKVSPASSVDSNIPSSQGYK 23 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 VNPHKVS(0.637)PAS(0.262)S(0.078)VDS(0.024)NIPSSQGYK 71.428 0.0011241 12634000 2951.5 2856 2677.2 2385.7 2426.9 2454.7 2539 3091.2 2563.7 2606 TRUE FALSE 2700.459426 2670.073881 2495.479123 2569.447027 2330.231434 2593.682993 2369.627943 3064.173964 2830.205789 2928.850954 0.922020092 0.91164553 0.852033498 0.87728842 0.795612843 0.885563326 0.809064025 1.046203447 0.9663195 1 11.51611906 -7.764953756 24.99999995 1.004696123 0.864685644 0.701996657 0.041629048 50.63852867 360212.1549 0.021865047 0.011161705 1.72E-08 7.764953756 -0.140010479 VNPHKVSPAS(ph)SVDSNIPSSQGYK ddPTM_A459_MK2206_30min_R1 1 VNPHKVSPASSVDSNIPSSQGYK 23 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 VNPHKVS(0.239)PAS(0.588)S(0.172)VDS(0.001)NIPSSQGYK 99.569 2.90E-05 16593000 2419.1 2616.4 2414.3 2219.2 2531.3 2536.3 2431.1 2713.8 1974 2360.5 TRUE FALSE 2213.342842 2446.071884 2250.424043 2390.123169 2430.472961 2679.903114 2268.925755 2690.073533 2179.204364 2652.936561 0.834299197 0.922024266 0.848276614 0.900934913 0.916144395 1.010164794 0.855250664 1.013998439 0.821431012 1 11.37337446 -6.178560724 2.777826122 0.937274827 0.874030208 0.187118825 0.063461816 0.482091606 7.272194489 0.018671317 0.024829017 6.63E-07 6.178560724 -0.06324462 VNPHKVSPAS(ph)SVDSNIPSSQGYK ddPTM_A459_MK2206_30min_R2 2 VNPHKVSPASSVDSNIPSSQGYK 23 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 VNPHKVS(0.317)PAS(0.654)S(0.03)VDSNIPSSQGYK;VNPHKVS(0.008)PAS(0.483)S(0.483)VDS(0.026)NIPSSQGYK 148.69 5.69E-08 31205900 98847 109449 111943 129748 112014 81623 122123 100270 94175 121156 TRUE FALSE 106414.8023 104013.9218 115675.1237 119147.1734 107615.7675 84729.22046 106088.1034 113375.6333 102366.1713 117202.6896 0.907955292 0.887470434 0.98696646 1.016590777 0.918202201 0.722928976 0.905167823 0.967346685 0.873411451 1 16.83864615 -3.309910088 15.0378513 0.915633157 0.305893482 0 0.080596973 0 0 0.019482537 0 0.00048988 3.309910088 -0.609739675 VNPHKVSPASSVDS(ph)NIPSSQGYK ddPTM_A459_MK2206_30min_R2 1 VNPHKVSPASSVDSNIPSSQGYK 23 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 VNPHKVS(0.023)PAS(0.084)S(0.084)VDS(0.808)NIPS(0.001)SQGYK 52.72 0.012609 16529000 47724 46727 52764 54670 49727 48068 59284 56281 40640 55812 TRUE FALSE 51377.78613 44406.60513 54523.12543 50203.28612 47774.46812 49897.26142 51499.93959 63637.11994 44174.79374 53990.85901 0.951601569 0.822483767 1.009858454 0.929847886 0.88486216 0.924179803 0.953864053 1.178664706 0.818190237 1 15.72042755 -7.532651964 24.99975085 1.01230934 0.920566526 0.121620173 0.092432843 367.8107373 940840.7 0.040687682 0.023524161 2.93E-08 7.532651964 -0.091742814 VNPSVNPSIS(ph)PAHGVAR ddPTM_A459_MK2206_30min_R1 1 VNPSVNPSISPAHGVAR 17 0 Q15788-2;Q15788-3;Q15788;B5MCN7 Q15788-2 NCOA1 Nuclear receptor coactivator 1 1 VNPSVNPS(0.12)IS(0.88)PAHGVAR 79.143 0.011914 4641500 2076.1 2031.5 1776.8 1952.5 2395.2 2120.5 1925.3 2379.6 2039.6 1404.8 TRUE FALSE 1899.516793 1899.248981 1656.195766 2102.881888 2299.794112 2240.560877 1796.86675 2358.795408 2251.623719 1578.83723 1.203111225 1.202941598 1.048997158 1.331918103 1.456637878 1.419120879 1.138094996 1.494007972 1.426127834 1 10.62464673 -5.849241465 8.307893377 1.346955848 1.157294255 0.205907385 0.150049224 0.345963632 28.83239882 0.040918388 0.060925568 1.42E-06 5.849241465 -0.189661594 VNPVTSLSENYT(ph)CSDSEESSEKDK ddPTM_A459_MK2206_30min_R2 1 VNPVTSLSENYTCSDSEESSEKDK 24 1 Q14432 Q14432 PDE3A "cGMP-inhibited 3,5-cyclic phosphodiesterase A" 1 VNPVTSLS(0.005)ENY(0.071)T(0.446)CS(0.446)DS(0.032)EESSEKDK 94.564 1.73E-05 9522900 37398 36666 39704 35726 35137 27674 43819 32285 24685 44803 TRUE FALSE 40261.21963 34845.21976 41027.71154 32807.07152 33757.34483 28727.15346 38065.51266 36504.76035 26832.05668 43341.08178 0.928938965 0.803976697 0.946624077 0.756950915 0.778876379 0.662815792 0.878277863 0.842266941 0.619090608 1 15.40344754 -5.774637157 24.9970604 0.782378011 0.884259601 0.155862872 0.106813122 395.479629 749051.6667 0.028710054 0.042868905 1.68E-06 5.774637157 0.10188159 VNPVTSLSENYTCS(ph)DSEESSEKDK ddPTM_A459_MK2206_30min_R1 2 VNPVTSLSENYTCSDSEESSEKDK 24 1 Q14432 Q14432 PDE3A "cGMP-inhibited 3,5-cyclic phosphodiesterase A" 1 VNPVTSLSENY(0.002)T(0.115)CS(0.853)DS(0.026)EES(0.002)S(0.002)EKDK;VNPVTSLS(0.014)ENY(0.271)T(0.233)CS(0.477)DS(0.004)EESSEKDK 89.684 3.41E-05 21358000 3143.55 3086.1 3217.74 2558.29 3329.64 2855.63 3438.09 2453.42 2859.5 3531.98 TRUE FALSE 2876.174565 2885.194329 2999.328774 2755.329939 3197.013388 3017.313303 3208.741289 2431.970008 3156.755258 3969.548347 0.724559651 0.72683189 0.755584392 0.694116735 0.805384671 0.760115015 0.808339138 0.612656603 0.79524293 1 11.95475915 -8.546566785 23.41730144 1.000000002 0.738157364 0.689663609 0.053135689 1564.820532 1546933.599 0.049825558 0.012864904 2.84E-09 8.546566785 -0.261842639 VNPVTSLSENYTCS(ph)DSEESSEKDK ddPTM_A459_MK2206_30min_R2 2 VNPVTSLSENYTCSDSEESSEKDK 24 1 Q14432 Q14432 PDE3A "cGMP-inhibited 3,5-cyclic phosphodiesterase A" 1 VNPVT(0.001)S(0.004)LS(0.054)ENY(0.171)T(0.149)CS(0.558)DS(0.056)EES(0.003)S(0.003)EKDK;VNPVTSLS(0.004)ENY(0.04)T(0.154)CS(0.795)DS(0.008)EESSEKDK 83.179 8.57E-05 12834200 100006 87418 95890 81069 77022 66344 99587 68081 59476 102556 TRUE FALSE 107662.5363 83076.94924 99086.92474 74445.40337 73997.72928 68868.76741 86511.10727 76979.42046 64649.11497 99209.60612 1.085202739 0.837388157 0.998763412 0.750385031 0.745872624 0.694174386 0.872003334 0.775927085 0.651641686 1 16.5981922 -5.764374973 24.99972812 0.773249562 0.960145127 0.390110685 0.107558801 73.71903984 627804.9779 0.028360419 0.044227355 1.72E-06 5.764374973 0.186895564 VNQIGSVTESLQACK ddPTM_A459_MK2206_30min_R1 2 VNQIGSVTESLQACK 15 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 203.74 0.00011895 31884000 5388.8 5699.4 6094 5433.3 5678.2 5513.3 5703.2 5820.7 5352 5077.9 FALSE TRUE 4930.454262 5328.368024 5680.356259 5851.773707 5452.02527 5825.458281 5322.749934 5769.810234 5908.359552 5706.988588 0.863932735 0.933656681 0.995333383 1.025369793 0.955324369 1.020758705 0.932672258 1.011007845 1.035284978 1 12.47851396 -4.936305048 2.233726087 0.995605945 0.851533098 0.663097508 0.030031316 0.26705785 2.021875502 0.007985157 0.067931551 1.16E-05 4.936305048 -0.144072847 VNQIGSVTESLQACK ddPTM_A459_MK2206_30min_R2 2 VNQIGSVTESLQACK 15 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 215.51 1.27E-06 10495700 35701 38722 33890 40052 39352 35475 43126 34174 32246 36912 FALSE TRUE 38434.29601 36799.12179 35019.87569 36779.62348 37806.84275 36825.02598 37463.5044 38640.65914 35050.69879 35707.56446 1.076362854 1.030569358 0.98074109 1.030023303 1.058790856 1.031294812 1.049175573 1.08214211 0.981604299 1 15.12394211 -4.761798518 9.53033377 1.030146599 1.076606567 0.179521271 0.030973488 0.143713011 229.7045955 0.007748835 0.043697642 1.73E-05 4.761798518 0.046459968 VNQSALEAVTPS(ph)PSFQQR ddPTM_A459_MK2206_30min_R1 3 VNQSALEAVTPSPSFQQR 18 0 Q9UKG1 Q9UKG1 APPL1 DCC-interacting protein 13-alpha 1 VNQSALEAVT(0.083)PS(0.911)PS(0.007)FQQR;VNQSALEAVT(0.008)PS(0.978)PS(0.013)FQQR;VNQSALEAVT(0.01)PS(0.988)PS(0.002)FQQR 269.99 5.53E-54 109913500 11341.8 10076.4 9638.2 7708.7 11305 8652.3 9930.2 8411.3 7643 6334.9 TRUE FALSE 10377.12035 9420.424529 8983.985838 8302.42541 10854.69791 9142.185749 9267.774477 8337.760891 8437.517201 7119.715238 1.457519017 1.323146251 1.261846231 1.166117623 1.524597199 1.284066208 1.30170578 1.17108067 1.185091948 1 12.79760382 -8.342248023 0.850990208 1.006328239 1.335803889 0.54493298 0.096515762 0.467435173 0.743248147 0.093525255 0.034436208 4.55E-09 8.342248023 0.32947565 VNQSALEAVTPS(ph)PSFQQR ddPTM_A459_MK2206_30min_R2 4 VNQSALEAVTPSPSFQQR 18 0 Q9UKG1 Q9UKG1 APPL1 DCC-interacting protein 13-alpha 1 VNQSALEAVT(0.002)PS(0.997)PS(0.001)FQQR;VNQSALEAVT(0.079)PS(0.873)PS(0.048)FQQR;VNQSALEAVT(0.326)PS(0.583)PS(0.091)FQQR;VNQSALEAVT(0.068)PS(0.892)PS(0.041)FQQR 213.01 6.09E-12 161561000 220521 278366 223962 282305 221301 239997 222122 187636 218295 199981 TRUE FALSE 237404.2573 264542.7492 231428.7813 259239.7785 212611.6108 249130.254 192957.1146 212160.6695 237281.9045 193455.6363 1.227176741 1.367459508 1.196288646 1.340047689 1.099019986 1.287790104 0.997423069 1.096689006 1.226544282 1 17.56164324 -6.674960155 0.995113868 1.092928995 1.287300224 0.401275792 0.09668055 0.536725287 1.147685573 0.051024345 0.05085995 2.11E-07 6.674960155 0.19437123 VNQSALEAVTPSPS(ph)FQQR ddPTM_A459_MK2206_30min_R1 1 VNQSALEAVTPSPSFQQR 18 0 Q9UKG1 Q9UKG1 APPL1 DCC-interacting protein 13-alpha 1 VNQSALEAVT(0.026)PS(0.14)PS(0.834)FQQR 203.23 8.81E-11 10171000 1536.6 1658.6 1413.8 1033.7 1543 1277.2 1318.5 1283 1108.6 1143.9 TRUE FALSE 1405.904101 1550.624839 1317.835195 1113.315753 1481.539043 1349.51396 1230.545271 1271.782866 1223.842937 1285.614968 1.093565442 1.206134712 1.025062113 0.865979147 1.152397164 1.049703056 0.957164704 0.989240868 0.951951376 1 10.32824292 -5.376345652 5.926146844 0.998153462 1.148398553 0.404809942 0.073720539 0.216080665 9.663789754 0.019656677 0.041663235 4.20E-06 5.376345652 0.150245091 VNS(ph)GDTEVGSSLLR ddPTM_A459_MK2206_30min_R1 2 VNSGDTEVGSSLLR 14 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 VNS(0.804)GDT(0.193)EVGS(0.003)SLLR;VNS(0.585)GDT(0.415)EVGSSLLR 224.64 1.93E-09 24259000 2056.8 2517.6 2416.5 1665.01 1494.53 1145.02 1702.64 1627.36 1881.66 1537.37 TRUE FALSE 1881.858359 2353.703782 2252.474713 1793.249359 1434.999705 1209.850043 1589.059992 1613.132163 2077.265291 1727.831002 1.08914492 1.362230322 1.303642955 1.037861548 0.830520869 0.700213181 0.919684848 0.933616865 1.202238696 1 10.7547464 -5.917563915 4.034465359 0.916418196 1.261027128 0.521830611 0.136343933 0.171031786 5.344998305 0.041531417 0.0633127 1.21E-06 5.917563915 0.344608932 VNS(ph)GDTEVGSSLLR ddPTM_A459_MK2206_30min_R2 3 VNSGDTEVGSSLLR 14 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 VNS(0.594)GDT(0.404)EVGS(0.001)SLLR;VNS(0.998)GDT(0.002)EVGSSLLR;VNS(0.5)GDT(0.5)EVGSSLLR 248.81 2.21E-27 44951100 92549 81956 80253 73289 57175 45693 66964 48139.2 47708.3 58600 TRUE FALSE 99634.6226 77886.18422 82928.59497 67301.05426 54930.02222 47431.87913 58171.54636 54431.15873 51857.8817 56687.8868 1.757599872 1.373947568 1.462897978 1.187221081 0.968990473 0.836719832 1.026172427 0.960190295 0.914796522 1 15.79075287 -5.748734614 1.185751099 0.936583965 1.626438479 0.885484817 0.094431328 0.163698361 0.448209746 0.033482151 0.091240127 1.78E-06 5.748734614 0.689854514 VNS(ph)NGKESPGSSEFFQEAVSHGK ddPTM_A459_MK2206_30min_R2 1 VNSNGKESPGSSEFFQEAVSHGK 23 1 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12 Q8N108-17 MIER1 Mesoderm induction early response protein 1 1 VNS(0.337)NGKES(0.337)PGS(0.27)S(0.056)EFFQEAVSHGK 47.32 0.027754 2864800 16812 16419 17340 22478 18263 14539 18969 19354 15122 22892 TRUE FALSE 18099.13965 15603.65634 17918.10695 20641.4755 17545.90286 15092.29183 16478.34751 21883.63425 16437.28423 22145.03591 0.817300081 0.704611923 0.809125215 0.932103952 0.792317652 0.681520314 0.744110219 0.988195925 0.74225593 1 14.43469572 -10.24901047 0.407208307 1.063194928 0.789166262 0.296211638 0.091296086 14.88589014 2.036045569 1.290839332 0.061118898 5.64E-11 10.24901047 -0.274028666 VNS(ph)NSLDLPSSSDTTHASK ddPTM_A459_MK2206_30min_R2 1 VNSNSLDLPSSSDTTHASK 19 0 A0A0A0MRJ3;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-6;Q8NEY1-5;H0Y6F6 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 VNS(0.574)NS(0.425)LDLPS(0.001)SSDTTHASK 91.767 0.0015871 5433900 18377 52878 30753 57048 40945 52265 44874 39836 53310 19906 TRUE FALSE 19783.95725 50252.15541 31778.28967 52386.99591 39337.29357 54253.9812 38981.9899 45042.70198 57946.80744 19256.46885 1.02739279 2.609624631 1.65026568 2.720488181 2.042809296 2.817441849 2.024358162 2.339094583 3.009212535 1 14.23305555 -4.752394691 24.9964925 2.288573206 1.027390362 0.286373125 0.573521357 418.9845738 1157848.883 0.129676865 1.552773187 1.77E-05 4.752394691 -1.261182845 VNS(ph)PGTLAR ddPTM_A459_MK2206_30min_R2 1 VNSPGTLAR 9 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6;P53814-2 A0A087WVP4 SMTN Smoothelin 1 VNS(0.882)PGT(0.118)LAR 95.094 0.022683 8492300 43114 43818 40309 41174 44238 34521 44895 26803 32134 42363 TRUE FALSE 46414.84099 41642.06184 41652.88194 37809.95249 42500.99384 35834.72085 39000.23257 30306.24413 34928.95724 40980.69878 1.132602478 1.016138404 1.016402433 0.922628301 1.037097832 0.874429229 0.951673196 0.739524826 0.852327029 1 15.32265696 -5.399306043 0.50431541 0.864349706 1.177854912 0.469400101 0.077203425 2.181825141 0.664831056 0.053734993 0.378268825 3.99E-06 5.399306043 0.313505206 VNSGDT(ph)EVGSSLLR ddPTM_A459_MK2206_30min_R1 1 VNSGDTEVGSSLLR 14 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 VNS(0.043)GDT(0.956)EVGSSLLR 185.86 0.00018924 20953000 1300.9 1518.8 1570.1 1024.5 1137 983.11 968.15 985.09 1113.5 1049.6 TRUE FALSE 1190.251624 1419.925844 1463.525987 1103.407168 1091.710882 1038.772839 903.56648 976.477462 1229.25231 1179.632372 1.00900217 1.203701999 1.240662787 0.935382237 0.925467042 0.880590312 0.765972943 0.827781167 1.0420639 1 10.2041216 -5.860240348 5.725152011 0.893862423 1.155209296 0.58071178 0.093120257 0.137215995 6.608684786 0.02705434 0.040811691 1.38E-06 5.860240348 0.261346874 VNSGDT(ph)EVGSSLLR ddPTM_A459_MK2206_30min_R2 1 VNSGDTEVGSSLLR 14 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 VNS(0.102)GDT(0.893)EVGS(0.002)S(0.004)LLR 163.34 0.00062866 6094400 17183 20212 19290 17119 12307 12373 17220 13756 6981.3 10345 TRUE FALSE 18498.54369 19208.30147 19933.11897 15720.32294 11823.76534 12843.86319 14958.99332 15553.95643 7588.520855 10007.4435 1.848478455 1.919401441 1.99182928 1.570863022 1.181497087 1.283430997 1.494786687 1.554238746 0.758287654 1 13.28878585 -5.625161698 0.3073541 0.985375738 2.440045001 0.658792936 0.224713658 3.070831378 0.353551949 0.287487299 1.611971363 2.37E-06 5.625161698 1.454669263 VNSNGKES(ph)PGSSEFFQEAVSHGK ddPTM_A459_MK2206_30min_R2 1 VNSNGKESPGSSEFFQEAVSHGK 23 1 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12 Q8N108-17 MIER1 Mesoderm induction early response protein 1 1 VNS(0.136)NGKES(0.648)PGS(0.177)S(0.039)EFFQEAVSHGK 54.834 0.0086943 5415900 45390 55026 48796 54935 45822 42571 52086 44077 42703 55349 TRUE FALSE 48865.0933 52293.48886 50422.83429 50446.63477 44022.79804 44191.06924 45247.04563 49838.01524 46417.22975 53542.96666 0.91263328 0.976664016 0.941726569 0.942171081 0.82219572 0.825338452 0.84506049 0.930804144 0.866915538 1 15.70840946 -6.155747271 8.669904835 0.87366443 0.94602609 0.242484155 0.052107101 0.415583722 31.10076527 0.015173147 0.019620412 6.99E-07 6.155747271 0.072361661 VNSPGT(ph)LAR ddPTM_A459_MK2206_30min_R2 1 VNSPGTLAR 9 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6;P53814-2 A0A087WVP4 SMTN Smoothelin 1 VNS(0.152)PGT(0.848)LAR 101.3 0.040109 7266500 40101 53623 39268 48605 44218 32922 46733 41919 35277 41399 TRUE FALSE 43171.16339 50960.1598 40577.17552 44633.81602 42481.77914 34174.86978 40596.90096 47397.95723 38345.32969 40048.15402 1.077981356 1.272472129 1.013209635 1.114503705 1.060767473 0.853344445 1.013702178 1.183524145 0.957480579 1 15.28944812 -5.645405192 1.410223207 1.017421335 1.168300672 0.238087691 0.097420815 0.674849806 2.612690748 0.032434353 0.090769099 2.26E-06 5.645405192 0.150879337 VNVALVYPPT(ph)PTVISPCSK ddPTM_A459_MK2206_30min_R2 1 VNVALVYPPTPTVISPCSK 19 0 Q9Y4C4 Q9Y4C4 MFHAS1 Malignant fibrous histiocytoma-amplified sequence 1 1 VNVALVYPPT(0.76)PT(0.231)VIS(0.008)PCSK 182.17 7.50E-13 4728700 65438 72651 68445 68242 77423 63524 81459 60928 56965 70825 TRUE FALSE 70447.98359 69043.25698 70726.92214 62666.4103 74382.984 65941.45033 70763.33545 68891.4988 61919.71273 68513.98605 1.028227777 1.007725006 1.032299042 0.914651357 1.085661312 0.9624524 1.032830514 1.00551001 0.903752888 1 16.0641109 -8.128579485 10.22464559 0.952000971 1.008298069 0.183019217 0.048025346 0.612111059 47.18298368 0.029979674 0.011312106 7.44E-09 8.128579485 0.056297098 VNVALVYPPTPTVIS(ph)PCSK ddPTM_A459_MK2206_30min_R2 1 VNVALVYPPTPTVISPCSK 19 0 Q9Y4C4 Q9Y4C4 MFHAS1 Malignant fibrous histiocytoma-amplified sequence 1 1 VNVALVYPPT(0.006)PT(0.384)VIS(0.551)PCS(0.058)K 124.98 0.00039839 3766100 30073 25360 29413 33097 33166 24418 29965 25358 24173 34279 TRUE FALSE 32375.412 24100.65928 30393.61474 30392.86923 31863.73619 25347.2441 26030.55951 28672.37767 26275.52385 33160.47904 0.97632522 0.726788634 0.916561389 0.916538907 0.96089493 0.76438112 0.784987439 0.864655111 0.792374676 1 15.01717723 -6.763802337 24.99873972 0.829302362 0.891734226 0.086750393 0.088491412 151.0620142 1598134.37 0.029704374 0.027435856 1.72E-07 6.763802337 0.062431864 VNVGAGSHPNK ddPTM_A459_MK2206_30min_R2 1 VNVGAGSHPNK 11 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 85.924 0.048036 7178000 78498 90308 73382 91611 86862 89924 89254 60936 95086 79440 FALSE TRUE 84507.86723 85823.43604 75828.51925 84126.08825 83451.36143 93346.12083 77534.84259 68900.54442 103356.4084 76847.87931 1.099677285 1.116796414 0.986735352 1.094709301 1.085929269 1.214687011 1.008939261 0.89658355 1.344948089 1 16.22971783 VNVTVDYIRPAS(ph)PATETVPAFSER ddPTM_A459_MK2206_30min_R1 1 VNVTVDYIRPASPATETVPAFSER 24 1 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 1 VNVT(0.001)VDY(0.005)IRPAS(0.47)PAT(0.129)ET(0.372)VPAFS(0.022)ER 51.234 0.018657 13391000 1531.8 1532.2 1208.3 1201.7 1305.8 1934.9 1726.6 1416.4 1088.9 1433.3 TRUE FALSE 1401.512366 1432.453502 1126.283963 1294.255142 1253.787221 2044.452366 1611.421664 1404.016564 1202.095052 1610.868025 0.870035499 0.88924324 0.699178297 0.803452004 0.778330193 1.269161927 1.00034369 0.871590064 0.746240557 1 10.65362259 VNVTVDYIRPASPATET(ph)VPAFSER ddPTM_A459_MK2206_30min_R1 1 VNVTVDYIRPASPATETVPAFSER 24 1 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 1 VNVTVDY(0.002)IRPAS(0.103)PAT(0.066)ET(0.802)VPAFS(0.026)ER 62.67 0.0070346 16948000 843.64 982.16 1259.3 979.07 1013 1101.7 1123.7 936.25 867.75 952.88 TRUE FALSE 771.8839879 918.2212055 1173.822225 1054.478141 972.6500649 1164.077302 1048.740023 928.064465 957.9557178 1070.929968 0.720760471 0.857405463 1.096077483 0.984637812 0.908229384 1.086977988 0.979279742 0.866596783 0.894508274 1 10.06464843 -4.968310433 4.202746549 0.974724808 0.735064012 0.558113995 0.071733914 0.158885629 6.297913828 0.019229141 0.08452945 1.08E-05 4.968310433 -0.239660796 VPAAFPTKVPVPGPGS(ph)GGNGPER ddPTM_A459_MK2206_30min_R1 2 VPAAFPTKVPVPGPGSGGNGPER 23 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 VPAAFPT(0.001)KVPVPGPGS(0.999)GGNGPER;VPAAFPT(0.016)KVPVPGPGS(0.984)GGNGPER 82.942 0.00021546 55481000 3849.1 3376.1 4229.1 3678.6 4832 3342.5 3802.9 3998.6 2865.5 2293.4 TRUE FALSE 3521.713833 3156.315276 3942.040475 3961.926409 4639.531208 3531.749461 3549.21548 3963.640662 3163.378979 2577.523706 1.366316757 1.224553345 1.52939058 1.537105711 1.799995553 1.370210273 1.376986552 1.537770788 1.227293845 1 11.33176998 -8.508665755 3.322520919 1.001087983 1.468236245 0.514478146 0.145759143 0.184544168 5.055080905 0.150763412 0.03994714 3.10E-09 8.508665755 0.467148262 VPAAFPTKVPVPGPGS(ph)GGNGPER ddPTM_A459_MK2206_30min_R2 2 VPAAFPTKVPVPGPGSGGNGPER 23 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 VPAAFPT(0.001)KVPVPGPGS(0.999)GGNGPER;VPAAFPTKVPVPGPGS(1)GGNGPER 84.515 0.00016247 24017000 30389 55838 47497 60625 69842 64019 60003 41936 65084 54021 TRUE FALSE 32715.60521 53065.16612 49080.52627 55671.74357 67099.65215 66455.28791 52124.53402 47417.17919 70744.88868 52258.29919 0.626036547 1.015439977 0.939191038 1.065318704 1.283999923 1.271669552 0.997440308 0.9073617 1.353754136 1 15.67337255 -4.371799153 1.033016293 1.122032531 3.95E-17 0.501820033 0.143797021 3.399562813 1.660908894 0.047185896 5.15322551 4.25E-05 4.371799153 -1.122032531 VPADTEVVCAPPTAYIDFAR ddPTM_A459_MK2206_30min_R1 2 VPADTEVVCAPPTAYIDFAR 20 0 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 0 ; 181.75 2.57E-12 23100000 709.94 1015.19 861.93 806.72 841.89 951.26 773.34 818.95 782.62 754.56 FALSE TRUE 649.555875 949.1009465 803.4245931 868.8537142 808.3557386 1005.119519 721.7518996 811.7900065 863.9761496 848.0405894 0.76594904 1.119169245 0.947389315 1.024542604 0.953204067 1.185225721 0.851081786 0.957253717 1.018791035 1 9.727989507 -4.742674021 24.90429168 1.002770919 0.765948229 0.398876603 0.08842063 1250.298971 1659233.474 0.021177248 0.729300385 1.81E-05 4.742674021 -0.23682269 VPAPFS(ph)PPPSKPR ddPTM_A459_MK2206_30min_R1 2 VPAPFSPPPSKPR 13 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 VPAPFS(0.707)PPPS(0.293)KPR;VPAPFS(0.918)PPPS(0.082)KPR 127.3 0.0092141 18491200 8157.2 7448.9 6849.8 5531.8 6884.5 5976 7602.7 6059.6 5411.3 5790 TRUE FALSE 7463.387305 6963.975256 6384.854661 5957.860194 6610.275787 6314.355956 7095.537755 6006.621556 5973.824 6507.308912 1.146923775 1.07017745 0.981182044 0.915564372 1.015823265 0.970348272 1.0903951 0.923057694 0.918017583 1 12.66784533 -5.030006957 2.48589834 0.97683331 1.14894728 0.547692418 0.050255259 0.265113007 2.863037251 0.013847338 0.07697085 9.33E-06 5.030006957 0.17211397 VPAPFS(ph)PPPSKPR ddPTM_A459_MK2206_30min_R2 2 VPAPFSPPPSKPR 13 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 VPAPFS(1)PPPSKPR;VPAPFS(0.999)PPPS(0.001)KPR 74.783 0.02665 43866000 148861 192707 150615 157951 111999 109904 153924 103884 103282 134978 TRUE FALSE 160257.9126 183137.4506 155636.4289 145045.898 107601.3565 114086.4737 133713.5939 117461.9955 112265.2817 130573.6789 1.22733704 1.402560241 1.191943355 1.110835654 0.824066208 0.873732552 1.024047075 0.899584024 0.859784932 1 16.99450458 -5.880155878 2.155537137 0.9131342 1.305746721 0.818872475 0.076482248 0.117865969 1.114829643 0.0233076 0.04020034 1.32E-06 5.880155878 0.392612521 VPAQANGTPT(ph)TK ddPTM_A459_MK2206_30min_R2 1 VPAQANGTPTTK 12 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 VPAQANGT(0.229)PT(0.596)T(0.175)K 139.19 0.0027558 13385000 77024 64377 53477 59350 56800 55095 60463 52512 48291 64368 TRUE FALSE 82921.01666 61180.13179 55259.89649 54500.91515 54569.7466 57191.67883 52524.13547 59375.4987 52491.26389 62267.67743 1.331686359 0.982534347 0.887457165 0.875268155 0.876373567 0.918481003 0.843521673 0.953552487 0.842993766 1 15.92619585 -4.743724171 2.671861383 0.895473427 1.444383954 0.886825309 0.046119492 0.147799023 1.281542882 0.010842676 0.191076288 1.80E-05 4.743724171 0.548910527 VPAS(ph)PLPGLER ddPTM_A459_MK2206_30min_R1 5 VPASPLPGLER 11 0 Q7KZI7-14;E9PC69;Q7KZI7-13;E7ETY4;Q7KZI7-15;Q7KZI7-16;Q7KZI7-3;Q7KZI7-9;Q7KZI7-8;Q7KZI7-11;Q7KZI7-6;Q7KZI7;Q7KZI7-12;Q7KZI7-4;Q7KZI7-5;Q7KZI7-2;Q7KZI7-7;Q7KZI7-10 Q7KZI7-14 MARK2 Serine/threonine-protein kinase MARK2 1 VPAS(1)PLPGLER;VPAS(1)PLPGLER;VPAS(1)PLPGLER;VPAS(1)PLPGLER;VPAS(1)PLPGLER 138.2 0.00127 447266400 7827.48 8440.6 7622.5 6267.83 8534 7964.16 8486.5 7579.4 6368.2 6920.3 TRUE FALSE 7161.711722 7891.115406 7105.105938 6750.579353 8194.072709 8415.083857 7920.381069 7513.134105 7030.197179 7777.63901 0.920807936 1.014590083 0.913529919 0.867947117 1.053542431 1.081958657 1.018352878 0.96599162 0.903898621 1 12.92511656 -6.271069944 24.9162398 1.006876787 0.934196082 0.294676386 0.056328073 948.6726425 2454405.431 0.019140621 0.021976698 5.36E-07 6.271069944 -0.072680705 VPAS(ph)PLPGLER ddPTM_A459_MK2206_30min_R2 4 VPASPLPGLER 11 0 Q7KZI7-14;E9PC69;Q7KZI7-13;E7ETY4;Q7KZI7-15;Q7KZI7-16;Q7KZI7-3;Q7KZI7-9;Q7KZI7-8;Q7KZI7-11;Q7KZI7-6;Q7KZI7;Q7KZI7-12;Q7KZI7-4;Q7KZI7-5;Q7KZI7-2;Q7KZI7-7;Q7KZI7-10 Q7KZI7-14 MARK2 Serine/threonine-protein kinase MARK2 1 VPAS(1)PLPGLER;VPAS(1)PLPGLER;VPAS(1)PLPGLER;VPAS(1)PLPGLER 110.64 0.0087072 286074000 93425 108549 94777 121269 91569 135684 117498 103310 116643 96965 TRUE FALSE 100577.6898 103158.6145 97936.81788 111360.9348 87973.54096 140847.5497 102070.3715 116812.9717 126788.3973 93801.03999 1.072244933 1.099759816 1.04409096 1.187203626 0.937873833 1.501556376 1.088158207 1.245327043 1.351673684 1 16.5173163 -6.729999398 24.99985281 1.243352605 1.075254201 0.267403664 0.139534735 265.2379088 210906.254 0.043115631 0.043111804 1.86E-07 6.729999398 -0.168098404 VPAS(ph)PQSQSSSQSPLTPR ddPTM_A459_MK2206_30min_R2 1 VPASPQSQSSSQSPLTPR 18 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 VPAS(0.907)PQS(0.078)QS(0.01)S(0.003)S(0.001)QS(0.001)PLTPR 124.45 0.00099755 0 3627.1 6581.6 5326.7 11571 6844 10025 8815.8 5509.5 8736.8 5255.9 TRUE FALSE 3904.793565 6254.767315 5504.289519 10625.61229 6575.270172 10406.5084 7658.27487 6229.610567 9496.711071 5084.400413 0.767994896 1.230187791 1.0825838 2.089845689 1.293224301 2.046752331 1.506229692 1.225239962 1.86781337 1 12.31186194 -5.600925017 13.57434727 1.589940345 1.038398133 0.341024432 0.349540144 0.95306625 163.195017 0.089349102 0.154767437 2.51E-06 5.600925017 -0.551542213 VPASETS(ph)PGPPPMGPPPPSSK ddPTM_A459_MK2206_30min_R2 3 VPASETSPGPPPMGPPPPSSK 21 0 Q9HD15 Q9HD15 SRA1 Steroid receptor RNA activator 1 1 VPAS(0.031)ET(0.156)S(0.813)PGPPPMGPPPPSSK;VPAS(0.022)ET(0.155)S(0.823)PGPPPMGPPPPSSK;VPAS(0.005)ET(0.311)S(0.685)PGPPPMGPPPPSSK 152.86 2.50E-07 5762100 48784 52049 49513 57134 51939 47054 56519 51816 46034 57825 TRUE FALSE 52518.94055 49464.32235 51163.73871 52465.96944 49899.61389 48844.67294 49097.98741 58588.52911 50037.95411 55938.17499 0.938874759 0.884267718 0.914647979 0.937927801 0.892049372 0.87319032 0.877718793 1.047380061 0.894522464 1 15.77154557 -7.738019431 24.9999397 0.978213523 0.902235124 0.429880364 0.041115216 204.9134315 218737.9028 0.018379996 0.010603828 1.83E-08 7.738019431 -0.075978398 VPCNVEGIS(ph)PELEK ddPTM_A459_MK2206_30min_R1 2 VPCNVEGISPELEK 14 0 Q86VQ1;H7C2L5;H7C0B2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 VPCNVEGIS(1)PELEK;VPCNVEGIS(1)PELEK 153.22 0.0003675 10068500 4144.4 4340.6 4535.2 3822.6 4169 3820.6 4106.5 4218.9 3856.3 3347.8 TRUE FALSE 3791.897017 4058.026151 4227.36326 4117.017314 4002.939902 4036.91907 3832.562878 4182.014602 4257.176185 3762.550739 1.00779957 1.078530612 1.123536546 1.094209115 1.063889946 1.072920832 1.018607627 1.111483909 1.13146014 1 11.87749532 -10.58935138 4.436850987 0.999994335 1.078543926 0.267607541 0.038727748 2.24E-06 4.70E-07 0.038620184 0.009366095 2.57E-11 10.58935138 0.078549591 VPCNVEGIS(ph)PELEK ddPTM_A459_MK2206_30min_R2 2 VPCNVEGISPELEK 14 0 Q86VQ1;H7C2L5;H7C0B2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 VPCNVEGIS(1)PELEK;VPCNVEGIS(1)PELEK 138.98 0.00057433 8062800 39829 48337 43105 52721 41864.1 35687 41568 37362 37967 39473 TRUE FALSE 42878.33886 45936.65487 44542.09919 48413.52565 40220.30508 37045.09379 36110.07167 42245.34168 41269.30103 38184.99924 1.122910559 1.203002639 1.166481605 1.26786766 1.053301188 0.970147821 0.945661186 1.106333443 1.080772603 1 15.22071837 -6.404537949 5.901622867 1.021506827 1.188555101 0.678267295 0.055664808 0.146939183 6.56034374 0.018435504 0.020881802 3.94E-07 6.404537949 0.167048274 VPDEEENEES(ph)DNEK ddPTM_A459_MK2206_30min_R2 2 VPDEEENEESDNEK 14 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 VPDEEENEES(1)DNEK;VPDEEENEES(1)DNEK 187.08 8.65E-05 34808000 51604.2 23695.4 30159.7 31376.8 25128.2 20110.2 42125.2 32572 13976.7 37168.4 TRUE FALSE 55555.05723 22518.72089 31165.20935 28813.21507 24141.54061 20875.50775 36594.11064 36829.27224 15192.3681 35955.59815 1.545101739 0.626292484 0.86676932 0.801355465 0.671426477 0.580591308 1.017758361 1.024298694 0.422531369 1 15.13392879 -4.754298209 24.99242385 0.78110218 1.545103071 0.584418233 0.193801087 177.672113 621757.0946 0.04715025 0.466737268 1.76E-05 4.754298209 0.764000891 VPDEEENEES(ph)DNEKETEK ddPTM_A459_MK2206_30min_R1 2 VPDEEENEESDNEKETEK 18 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 VPDEEENEES(1)DNEKETEK;VPDEEENEES(1)DNEKETEK 116.45 0.00057237 163348000 8212.7 10213.7 9966.8 7138.3 3711 5249 7644 5300 12416.1 15502.1 TRUE FALSE 7514.166738 9548.786274 9290.281385 7688.093103 3563.183012 5546.193844 7134.082707 5253.662659 13706.79803 17422.61718 0.431288058 0.54806842 0.533231103 0.441270851 0.204514797 0.318332991 0.409472505 0.301542679 0.786724399 1 14.08867374 -8.440342458 3.716687875 0.995499 0.401504561 0.804324018 0.100056429 0.097583733 2.490798897 0.108653962 0.028661229 3.63E-09 8.440342458 -0.593994439 down VPDEEENEES(ph)DNEKETEK ddPTM_A459_MK2206_30min_R2 2 VPDEEENEESDNEKETEK 18 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 VPDEEENEES(0.999)DNEKET(0.001)EK;VPDEEENEES(1)DNEKETEK 76.156 0.0081594 787640000 156340 92464 108537 86663 60478 49026.7 138973 95987 47445.2 116297 TRUE FALSE 168309.5106 87872.37222 112155.5694 79582.35568 58103.32984 50892.44542 120725.6782 108532.8305 51571.89773 112502.2384 1.496054772 0.781072212 0.996918559 0.707384642 0.516463767 0.452368292 1.073095788 0.964717076 0.458407748 1 16.77959418 -2.661345934 1.303972079 0.748919527 199.9840311 0.474873087 0.22591496 355.034412 2.99077959 0.067242221 209166.2018 0.002180992 2.661345934 199.2351116 VPDS(ph)PENELK ddPTM_A459_MK2206_30min_R1 1 VPDSPENELK 10 0 A0A0U1RR46;A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35 A0A0U1RR46 INADL InaD-like protein 1 VPDS(1)PENELK 136.93 0.0018015 10861000 3435.7 3804.8 3754.9 3272.3 2853 2781.6 2949.3 3144.1 3629.3 3887.2 TRUE FALSE 3143.475673 3557.106828 3500.02785 3524.333113 2739.358969 2939.091788 2752.557578 3116.611465 4006.578723 4368.775683 0.719532405 0.814211369 0.801146157 0.806709561 0.627031271 0.67274953 0.630052394 0.713383266 0.917094173 1 12.09301332 -8.383462354 3.457122673 0.995196991 0.723334442 0.682946086 0.065191422 0.150644005 3.140490476 0.071308582 0.019042477 4.14E-09 8.383462354 -0.271862549 VPDS(ph)PENELK ddPTM_A459_MK2206_30min_R2 3 VPDSPENELK 10 0 A0A0U1RR46;A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35 A0A0U1RR46 INADL InaD-like protein 1 VPDS(1)PENELK;VPDS(1)PENELK;VPDS(1)PENELK 132.03 0.0025097 22286500 168784 158023 157818 137466 139971 114545 177012 130812 129001 160567 TRUE FALSE 181706.2328 150175.8076 163079.5734 126234.5881 134475.0352 118904.0902 153770.1118 147909.5775 140221.2738 155327.7119 1.16982495 0.966832034 1.049906493 0.812698433 0.865750442 0.765504679 0.989972168 0.952242042 0.902744733 1 17.24495572 -4.42241793 1.060373675 0.900416077 1.490277652 0.474800042 0.080976569 3.039189899 1.679860351 0.026210378 2.424440632 3.78E-05 4.42241793 0.589861575 VPEASSEPFDTS(ph)SPQAGR ddPTM_A459_MK2206_30min_R2 2 VPEASSEPFDTSSPQAGR 18 0 H0Y6F5;Q9H4I2 H0Y6F5 ZHX3 Zinc fingers and homeoboxes protein 3 1 VPEASSEPFDT(0.154)S(0.491)S(0.355)PQAGR;VPEASSEPFDT(0.087)S(0.457)S(0.457)PQAGR 118.55 0.00099476 26982000 89045 114867 97706 120703 108830 96451 103584 80236 82066 99984 TRUE FALSE 95862.35366 109162.8718 100963.4693 110841.1788 104556.7874 100121.5104 89983.29637 90723.12069 89203.95234 96721.53027 0.991117008 1.128630528 1.043857236 1.145982477 1.081008407 1.035152257 0.930333672 0.937982685 0.922276065 1 16.56154945 -7.091654304 3.062671246 0.94226642 1.082114629 0.651979773 0.044818304 0.149787057 2.704863359 0.017641732 0.013491433 8.10E-08 7.091654304 0.139848209 VPEASSEPFDTSS(ph)PQAGR ddPTM_A459_MK2206_30min_R1 1 VPEASSEPFDTSSPQAGR 18 0 H0Y6F5;Q9H4I2 H0Y6F5 ZHX3 Zinc fingers and homeoboxes protein 3 1 VPEASSEPFDT(0.003)S(0.384)S(0.613)PQAGR 203.93 1.49E-29 0 947.33 903.25 981.25 715.98 984.71 717.46 615.2 798.9 686.65 562.91 TRUE FALSE 866.7546089 844.4482608 914.6454839 771.1249037 945.4869155 758.0819652 574.1611305 791.9153015 758.0297247 632.6475406 1.370043434 1.334784705 1.445742574 1.218885484 1.494492359 1.198269046 0.907552932 1.251748013 1.198186472 1 9.305258162 -6.970988532 8.607313049 1.102164784 1.36467174 0.588651348 0.112036645 0.180400162 47.84269794 0.038811381 0.034002713 1.07E-07 6.970988532 0.262506955 VPEEAAQDRPMS(ph)PGDCPPETTETPK ddPTM_A459_MK2206_30min_R1 1 VPEEAAQDRPMSPGDCPPETTETPK 25 1 P13994 P13994 CCDC130 Coiled-coil domain-containing protein 130 1 VPEEAAQDRPMS(0.992)PGDCPPET(0.008)TETPK 73.404 0.00027016 8073300 509.1 476.68 301.15 334.18 282.2 220.33 336.51 506.78 204.89 319.58 TRUE FALSE 465.7983716 445.6480454 280.7087771 359.9186015 270.9593764 232.8048942 314.0620319 502.3492759 226.1890487 359.1719831 1.296867221 1.240765055 0.781544191 1.002078721 0.75440009 0.648171086 0.874405707 1.398631574 0.629751371 1 8.488531008 -5.210034384 7.202420928 0.891018681 1.273278165 0.346631573 0.210122525 0.303622833 36.31920678 0.054175563 0.144396747 6.17E-06 5.210034384 0.382259484 VPEEAAQDRPMS(ph)PGDCPPETTETPK ddPTM_A459_MK2206_30min_R2 2 VPEEAAQDRPMSPGDCPPETTETPK 25 1 P13994 P13994 CCDC130 Coiled-coil domain-containing protein 130 1 VPEEAAQDRPMS(0.999)PGDCPPET(0.001)TETPK;VPEEAAQDRPMS(0.999)PGDCPPET(0.001)TETPK 85.913 5.12E-05 20172200 73861 86367 65502 78501 72900 64474 81611 63779 55546 75199 TRUE FALSE 79515.85495 82078.14037 67685.80399 72087.21719 70037.57971 66927.60325 70895.37767 72115.13429 60377.29068 72745.26279 1.093072619 1.128295331 0.930449646 0.990954111 0.962778565 0.920026964 0.97457037 0.991337876 0.82998244 1 16.15056568 -5.260704796 24.998457 0.951427419 1.110683988 0.642495502 0.047931416 36.34853665 1236908.282 0.011861327 0.027862765 5.49E-06 5.260704796 0.159256569 VPEEPAAEEPAS(ph)PEESSGLSLLHQESK ddPTM_A459_MK2206_30min_R1 1 VPEEPAAEEPASPEESSGLSLLHQESK 27 0 O95382-2;O95382-3;O95382 O95382-2 MAP3K6 Mitogen-activated protein kinase kinase kinase 6 1 VPEEPAAEEPAS(0.999)PEES(0.001)SGLSLLHQESK 131.03 3.92E-12 5635100 1180.9 624.95 1099.8 644.73 1112.4 1128.5 1118.2 969.58 827.07 865.49 TRUE FALSE 1080.458254 584.2656414 1025.14864 694.3872163 1068.090752 1192.394695 1043.606918 961.1030643 913.0468862 972.7134353 1.110767277 0.600655466 1.053906118 0.713866172 1.098052842 1.22584376 1.072882187 0.988063935 0.938659684 1 9.925871035 -6.28474323 24.45754268 1.062864873 0.863724744 0.250353555 0.15547887 775.9522943 814364.4497 0.046432552 0.052683536 5.19E-07 6.28474323 -0.199140129 VPFAPGPS(ph)PPPLLGNMDQER ddPTM_A459_MK2206_30min_R1 2 VPFAPGPSPPPLLGNMDQER 20 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 VPFAPGPS(1)PPPLLGNMDQER;VPFAPGPS(1)PPPLLGNMDQER 132.9 0.00013895 17089400 3696.3 3447.3 3264.8 2611.5 3757.3 3578.6 4924.9 3282.1 4758.6 5230 TRUE FALSE 3381.910275 3222.880143 3043.194472 2812.638182 3607.638785 3781.217239 4596.368907 3253.404946 5253.273499 5877.931884 0.575357173 0.548301717 0.517732177 0.478508128 0.613759883 0.643290415 0.781970427 0.553494836 0.893728203 1 12.52109293 -8.322034531 0.450250204 1.019663328 0.519444322 0.766302213 0.07968168 0.499658527 0.27135398 0.097042174 0.055298265 4.76E-09 8.322034531 -0.500219006 VPFAPGPS(ph)PPPLLGNMDQER ddPTM_A459_MK2206_30min_R2 4 VPFAPGPSPPPLLGNMDQER 20 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 VPFAPGPS(1)PPPLLGNMDQER;VPFAPGPS(1)PPPLLGNMDQER;VPFAPGPS(1)PPPLLGNMDQER;VPFAPGPS(1)PPPLLGNMDQER 103.87 0.00055668 14360900 41214.7 43179.7 41105.8 45204.6 34222.5 37938.9 38347.2 34530.2 33870.6 41916.4 TRUE FALSE 44370.12912 41035.45889 42476.24686 41511.23958 32878.7527 39382.69142 33312.16658 39043.4157 36816.60356 40548.6713 1.094243725 1.012005019 1.04753733 1.02373859 0.810846611 0.97124493 0.821535343 0.962877807 0.907960788 1 15.30736702 -6.093669866 7.711630645 0.909100073 1.045459381 0.54056074 0.059879894 0.206990544 15.1309237 0.016446199 0.021316016 8.06E-07 6.093669866 0.136359308 VPFS(ph)PGPAPPPHMGELDQER ddPTM_A459_MK2206_30min_R1 2 VPFSPGPAPPPHMGELDQER 20 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JHW1 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 VPFS(1)PGPAPPPHMGELDQER;VPFS(1)PGPAPPPHMGELDQER 139.46 5.04E-05 17509200 2538.6 2384.2 2559.7 2533.8 2459.2 2323.95 2224.08 2277 1839.8 1975.22 TRUE FALSE 2322.678739 2228.988147 2385.954696 2728.953715 2361.244857 2455.530041 2075.715681 2257.092429 2031.053794 2219.925166 1.046286954 1.004082561 1.074790598 1.229299869 1.063659664 1.1061319 0.935038583 1.016742575 0.914919937 1 11.11629533 -7.256987444 24.9287193 0.968070487 1.088390336 0.484733648 0.060952335 343.6764538 1924429.182 0.025250755 0.018880619 5.53E-08 7.256987444 0.12031985 VPFS(ph)PGPAPPPHMGELDQER ddPTM_A459_MK2206_30min_R2 2 VPFSPGPAPPPHMGELDQER 20 0 Q6Y7W6;I1E4Y6;Q6Y7W6-3;Q6Y7W6-5;Q6Y7W6-4;E7ESB6;C9JHW1 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 VPFS(1)PGPAPPPHMGELDQER;VPFS(1)PGPAPPPHMGELDQER 85.496 0.0015926 7499400 17589.1 20699.6 17963.5 19161.6 20669.8 18789.9 19768.5 16994.1 20327.6 20100.1 TRUE FALSE 18935.73502 19671.68796 18562.39412 17596.03599 19858.19979 19504.96281 17172.8722 19215.28722 22095.6579 19444.23538 0.973848272 1.011697687 0.954647676 0.904948723 1.021289827 1.003123158 0.883185781 0.988225396 1.136360339 1 14.24705488 -8.022730191 23.30243459 1.066217839 0.965190779 0.385100634 0.051569049 328.9641174 337241.7614 0.033544499 0.012926099 9.49E-09 8.022730191 -0.10102706 VPGEDGTLPPT(ph)QGSPLR ddPTM_A459_MK2206_30min_R1 1 VPGEDGTLPPTQGSPLR 17 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 VPGEDGTLPPT(0.959)QGS(0.041)PLR 125.41 0.0029206 20474000 666.68 840.99 895.55 689.32 811.05 845.21 905.22 793.51 748.66 829.54 TRUE FALSE 609.9753651 786.2413981 834.7625611 742.4115458 778.7441611 893.0650598 844.8344255 786.5724257 826.4858861 932.3096779 0.654262612 0.843326436 0.895370477 0.796314319 0.835284862 0.957906027 0.906173609 0.843681498 0.886492874 1 9.864665433 -4.206267008 1.421279734 0.885162761 5.10E-15 0.611000841 0.056054461 3.813843367 2.222269428 0.016053711 7.207018338 6.22E-05 4.206267008 -0.885162761 VPGEDGTLPPT(ph)QGSPLR ddPTM_A459_MK2206_30min_R2 3 VPGEDGTLPPTQGSPLR 17 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 VPGEDGTLPPT(0.915)QGS(0.085)PLR;VPGEDGT(0.001)LPPT(0.901)QGS(0.098)PLR;VPGEDGTLPPT(0.814)QGS(0.186)PLR 172.93 1.12E-06 38072000 26295.2 31881.5 29939.5 37401.8 35897.6 30830.1 34821.6 31340.8 29595.6 30294 TRUE FALSE 28308.38073 30298.31107 30937.66799 34345.9533 34488.07985 32003.36106 30249.48209 35437.15017 32169.77179 29305.50926 0.965974707 1.033877651 1.055694604 1.171996466 1.17684629 1.092059543 1.032211446 1.209231679 1.097738023 1 14.83888429 -5.225257921 1.936656772 1.117713503 0.975707676 0.337514699 0.062667497 0.428520095 2.814075058 0.017554228 0.077817563 5.95E-06 5.225257921 -0.142005827 VPGEDGTLPPTQGS(ph)PLR ddPTM_A459_MK2206_30min_R1 3 VPGEDGTLPPTQGSPLR 17 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 VPGEDGTLPPT(0.056)QGS(0.944)PLR;VPGEDGTLPPT(0.234)QGS(0.766)PLR;VPGEDGTLPPT(0.002)QGS(0.998)PLR 182.28 7.02E-08 33642500 2823.66 3121.17 3024.99 2813.8 3238.68 2738.88 2744.94 2684.18 2085.46 2503.36 TRUE FALSE 2583.492889 2917.981266 2819.662107 3030.519364 3109.676518 2893.953019 2561.830061 2660.712497 2302.25103 2813.495136 0.918250349 1.037137484 1.002191925 1.077136877 1.105271688 1.028597129 0.910550734 0.945696498 0.818288612 1 11.45814775 -7.254029158 8.294899066 0.914008555 1.033161333 0.422993116 0.062373624 0.131943459 90.19074498 0.024802082 0.018254503 5.57E-08 7.254029158 0.119152778 VPGEDGTLPPTQGS(ph)PLR ddPTM_A459_MK2206_30min_R2 2 VPGEDGTLPPTQGSPLR 17 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 VPGEDGT(0.001)LPPT(0.102)QGS(0.897)PLR;VPGEDGTLPPTQGS(1)PLR 180.03 7.92E-08 25339000 37719 50407 39960 47310 48564 48525 48015 37023 49049 44456 TRUE FALSE 40606.79564 47903.86168 41292.24646 43444.62166 46657.13335 50371.65288 41710.57282 41862.03322 53315.19336 43005.40436 0.944225412 1.113903296 0.960164125 1.010213072 1.084913258 1.171286577 0.969891423 0.973413315 1.239732405 1 15.39223035 -6.25372601 22.95968352 1.071615113 1.011398926 0.113528125 0.090078039 508.4226687 1513368.488 0.02659792 0.03360082 5.58E-07 6.25372601 -0.060216187 VPGEQGS(ph)DEEHCK ddPTM_A459_MK2206_30min_R1 1 VPGEQGSDEEHCK 13 0 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 VPGEQGS(1)DEEHCK 87.419 0.016642 8596800 2776.3 3273.4 2829.5 2765.3 2441.7 2327.9 3014.6 2563.3 2835.9 3242.9 TRUE FALSE 2540.161106 3060.301065 2637.441423 2978.283885 2344.441919 2459.703686 2813.501534 2540.889338 3130.701953 3644.654935 0.696955172 0.839668259 0.7236464 0.817164845 0.643254838 0.674879716 0.771952787 0.69715498 0.858984461 1 11.83156652 -8.534998906 3.347548655 0.999558237 0.735916743 0.673848375 0.058727825 0.129676437 3.903530844 0.056757855 0.015020442 2.92E-09 8.534998906 -0.263641494 VPGEQGS(ph)DEEHCK ddPTM_A459_MK2206_30min_R2 3 VPGEQGSDEEHCK 13 0 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 VPGEQGS(1)DEEHCK;VPGEQGS(1)DEEHCK;VPGEQGS(1)DEEHCK 186.08 0.00013049 25591600 79029 66054 76191.8 81250 64819.5 60527.9 91914 80813.9 52414.9 88716 TRUE FALSE 85079.521 62773.85441 78731.99658 74611.61509 62274.36074 62831.33165 79845.58139 91376.55421 56973.85326 85821.20419 0.99135781 0.731449238 0.917395617 0.869384388 0.725629072 0.73211897 0.930371254 1.064731672 0.663866859 1 16.38904652 -10.81345953 7.087316512 1.000001421 0.84852926 0.118766729 0.124692761 2.76E-06 2.76E-07 0.118900216 0.028837268 1.54E-11 10.81345953 -0.15147216 VPGGS(ph)PLGVSLVYSDKK ddPTM_A459_MK2206_30min_R1 1 VPGGSPLGVSLVYSDKK 17 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 VPGGS(1)PLGVSLVYSDKK 83.776 0.0066229 12889000 3429.5 3327.9 3516.8 2986.3 3173.4 2733 3102.8 3114.2 2713.7 2675.2 TRUE FALSE 3137.803016 3111.253105 3278.089414 3216.305343 3046.996758 2887.740098 2895.817873 3086.972878 2995.798826 3006.623973 1.043630013 1.03479954 1.090289123 1.069739805 1.013427946 0.960459347 0.963146007 1.026723962 0.996399568 1 11.55392873 -6.4253037 4.205588349 0.989095297 1.059605524 0.684175125 0.022489623 0.146050109 4.496888417 0.007862891 0.008857762 3.76E-07 6.4253037 0.070510226 VPGGS(ph)PLGVSLVYSDKK ddPTM_A459_MK2206_30min_R2 2 VPGGSPLGVSLVYSDKK 17 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 VPGGS(1)PLGVSLVYSDKK;VPGGS(1)PLGVSLVYSDKK 94.454 0.0034856 24465000 139090 179424 170925 162678 176764 139116 185657 146716 143517 170016 TRUE FALSE 149738.8373 170514.0651 176623.5542 149386.687 169823.3572 144410.1569 161280.0129 165892.285 155999.8492 164468.3918 0.910441427 1.036758876 1.073905765 0.908300284 1.032559237 0.878042007 0.980614032 1.008657549 0.948509604 1 17.32745082 -4.728511732 23.94588824 0.983878771 0.910440552 0.134462388 0.056850683 6166.146553 4483753.643 0.014073772 2.154946475 1.87E-05 4.728511732 -0.073438219 VPGPAEGPAEPAAEAS(ph)DEAERR ddPTM_A459_MK2206_30min_R2 1 VPGPAEGPAEPAAEASDEAERR 22 1 Q24JP5;Q24JP5-2;H0YFQ2;Q24JP5-4 Q24JP5 TMEM132A Transmembrane protein 132A 1 VPGPAEGPAEPAAEAS(1)DEAERR 57.735 0.01062 12634000 18784 33380 27153 35772 41743 28543 32958 28239 24542 32515 TRUE FALSE 20222.11748 31722.39774 28058.26747 32849.31317 40103.96008 29629.22387 28630.57501 31929.93426 26676.6188 31454.03821 0.642910056 1.008531799 0.89204023 1.044359168 1.275001951 0.941984735 0.910235271 1.015129887 0.848114274 1 14.94095763 -4.760240076 24.85693621 0.996404496 0.6429096 0.470877009 0.111218423 26.25822637 543987.0353 0.028959416 0.173907242 1.74E-05 4.760240076 -0.353494896 VPGS(ph)SGHLHK ddPTM_A459_MK2206_30min_R2 1 VPGSSGHLHK 10 0 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 VPGS(0.622)S(0.378)GHLHK 72.652 0.04467 22518000 35095 32489 27077 39613 27651 34359 37399 28902 29370 33622 TRUE FALSE 37781.90018 30875.6435 27979.73367 36376.49118 26565.2828 35666.55582 32488.46638 32679.59064 31924.54951 32524.91689 1.161629415 0.949292003 0.860255347 1.118419189 0.816767123 1.096591759 0.998879305 1.004755546 0.981541309 1 14.98925775 VPKPEPIPEPKEPS(ph)PEK ddPTM_A459_MK2206_30min_R1 2 VPKPEPIPEPKEPSPEK 17 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK 126.09 0.0013523 260310000 5865.8 9139.6 8640.1 7938.2 4293.4 3173.5 4039.2 5409.4 6222.8 4392.7 TRUE FALSE 5366.882907 8544.610379 8053.634085 8549.601539 4122.384787 3353.180828 3769.752338 5362.106186 6869.682329 4936.900839 1.087095545 1.730764027 1.631313722 1.731775018 0.835014703 0.679207652 0.763586805 1.08612799 1.391496923 1 12.26938995 -6.264920529 24.99582447 0.939761218 1.564637344 0.566782897 0.250407586 225.498608 1619153.254 0.080853981 0.095387666 5.43E-07 6.264920529 0.624876125 VPKPEPIPEPKEPS(ph)PEK ddPTM_A459_MK2206_30min_R2 2 VPKPEPIPEPKEPSPEK 17 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK 125.92 0.0013667 224663000 387702 616360 580000 396920 575550 308424 656420 431680 405990 594790 TRUE FALSE 417384.7632 585752.4587 599336.9105 364490.3663 552951.0151 320161.2914 570231.2655 488102.0582 441302.2763 575382.051 0.725404559 1.018023516 1.041632963 0.633475385 0.961015406 0.556432532 0.99104806 0.848309497 0.766972615 1 19.13416069 -5.733260507 24.99997158 0.817856694 0.937320543 0.084210276 0.158689651 494.249617 438488.8618 0.040902812 0.070827662 1.85E-06 5.733260507 0.119463849 VPKPEPIPEPKEPS(ph)PEKNSK ddPTM_A459_MK2206_30min_R1 1 VPKPEPIPEPKEPSPEKNSK 20 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VPKPEPIPEPKEPS(0.987)PEKNS(0.013)K 54.964 0.032429 8359400 2149.4 2545.4 2804.9 3107.2 2081.5 1317.2 1716.4 2404.7 1367.8 910.5 TRUE FALSE 1966.582243 2379.693997 2614.511203 3346.517082 1998.589447 1391.778726 1601.902088 2383.675961 1509.987705 1023.299614 1.92180493 2.325510501 2.554981129 3.270319892 1.953083359 1.360089173 1.565428215 2.329401799 1.47560664 1 9.999012901 -6.512424805 23.79407012 1.63330985 2.520109094 0.51403774 0.441545231 242.3954964 551715.1795 0.144615798 0.153785257 3.07E-07 6.512424805 0.886799244 VPLAPITDPQQLQLS(ph)PLK ddPTM_A459_MK2206_30min_R1 3 VPLAPITDPQQLQLSPLK 18 0 P31350-2;P31350;A0A286YFD6 P31350-2 RRM2 Ribonucleoside-diphosphate reductase subunit M2 1 VPLAPITDPQQLQLS(1)PLK;VPLAPITDPQQLQLS(1)PLK;VPLAPIT(0.018)DPQQLQLS(0.982)PLK 192.19 1.64E-10 1997170000 12505.5 14097 12901.7 11280.6 8751.73 10063.5 10465.5 10506.3 10209.8 10724.3 TRUE FALSE 11441.84156 13179.28274 12025.96855 12149.43377 8403.130062 10633.28667 9767.36559 10414.44453 11271.14525 12052.90725 0.949301386 1.093452597 0.997764963 1.008008567 0.697186985 0.882217581 0.810374243 0.864060787 0.935139134 1 13.55709356 -6.047859685 24.35505167 0.855853746 1.018398642 0.438860799 0.081180986 243.0615323 123689.7514 0.0229333 0.029607646 8.96E-07 6.047859685 0.162544896 VPLAPITDPQQLQLS(ph)PLK ddPTM_A459_MK2206_30min_R2 2 VPLAPITDPQQLQLSPLK 18 0 P31350-2;P31350;A0A286YFD6 P31350-2 RRM2 Ribonucleoside-diphosphate reductase subunit M2 1 VPLAPITDPQQLQLS(1)PLK;VPLAPITDPQQLQLS(1)PLK 161.1 1.12E-05 2447000000 7061100 8669700 7351500 7522200 9325300 7535800 9953300 6563200 7634600 9675500 TRUE FALSE 7601703.245 8239175.305 7596595.341 6907612.198 8959141.866 7822580.15 8646419.754 7421032.775 8298643.708 9359789.227 0.812166071 0.880273594 0.811620343 0.738009375 0.957194831 0.835764563 0.923783596 0.792863236 0.886627199 1 23.15804461 -6.265064693 24.99555352 0.88705558 0.815578722 0.305583355 0.063841839 488.0953263 3365279.725 0.019133833 0.022530763 5.43E-07 6.265064693 -0.071476858 VPLS(ph)PLSLLAGPADAR ddPTM_A459_MK2206_30min_R1 1 VPLSPLSLLAGPADAR 16 0 Q53ET0;H0YDQ8;Q5T4K5 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 1 VPLS(0.998)PLS(0.002)LLAGPADAR 132.15 0.00064287 59221000 702.14 600.79 513.61 424.94 949.68 890.72 1103 1288.1 1050.9 972.7 TRUE FALSE 642.4193059 561.6784618 478.7475842 457.6689524 911.8522346 941.1517967 1029.420883 1276.838278 1160.144816 1093.20542 0.587647385 0.513790411 0.437930123 0.418648631 0.834108776 0.860910292 0.941653658 1.167976535 1.061232221 1 10.0943488 -6.660823973 1.36100112 1.058755707 0.483269065 0.889775288 0.085873479 0.131491786 0.508971996 0.040737078 0.040226868 2.18E-07 6.660823973 -0.575486643 VPLS(ph)PLSLLAGPADAR ddPTM_A459_MK2206_30min_R2 1 VPLSPLSLLAGPADAR 16 0 Q53ET0;H0YDQ8;Q5T4K5 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 1 VPLS(0.94)PLS(0.06)LLAGPADAR 107.73 0.0032672 62697000 13380 19456 16937 21473 21388 23766 32543 29314 28400 28135 TRUE FALSE 14404.38309 18489.84333 17501.67113 19718.58721 20548.19965 24670.43178 28270.06501 33145.44045 30870.18066 27216.95725 0.529242963 0.679350126 0.6430429 0.724496388 0.754977842 0.90643607 1.038693075 1.217823144 1.134226004 1 14.73221817 -6.887278591 1.143129952 1.138533696 0.631186604 0.903019894 0.067895941 0.131163973 0.358729058 0.037446137 0.029924707 1.30E-07 6.887278591 -0.507347092 VPLSNENSQVPQS(ph)PEDWR ddPTM_A459_MK2206_30min_R2 1 VPLSNENSQVPQSPEDWR 18 0 Q8IZT6-2;Q8IZT6 Q8IZT6-2 ASPM Abnormal spindle-like microcephaly-associated protein 1 VPLS(0.002)NENS(0.041)QVPQS(0.958)PEDWR 87.323 0.0069228 3443100 0 1193.3 1775.3 1079.4 2374.4 1382 1622.8 1114.1 0 1553.3 TRUE FALSE 0 1134.042457 1834.487616 991.2095672 2281.169126 1434.592978 1409.724411 1259.716695 0 1502.615948 0 0.754712113 1.220862602 0.659655961 1.518131848 0.954730302 0.93818012 0.838349078 0 1 10.5532606 -11.39142643 4.529069064 1.048250144 0.809955532 0.015159237 0.452356442 0.222110386 0.006446558 0.441413293 0.10688821 4.06E-12 11.39142643 -0.238294612 VPLSNENSQVPQS(ph)PEDWRK ddPTM_A459_MK2206_30min_R1 1 VPLSNENSQVPQSPEDWRK 19 1 Q8IZT6-2;Q8IZT6 Q8IZT6-2 ASPM Abnormal spindle-like microcephaly-associated protein 1 VPLSNENSQVPQS(1)PEDWRK 108.14 0.00038557 5188900 827.85 814.09 999.28 715.51 735.82 503.75 734.23 819.96 754.81 623.29 TRUE FALSE 757.4370103 761.092593 931.4516578 770.6187042 706.5107313 532.2718897 685.2508564 812.7911762 833.2752006 700.5078708 1.08126838 1.086486854 1.329680503 1.100085718 1.008569298 0.759837129 0.978220067 1.160288428 1.189530104 1 9.45225745 -6.089232918 4.594558987 1.010709452 1.165709494 0.220481987 0.126249599 0.36894675 13.41633731 0.041833673 0.05561512 8.14E-07 6.089232918 0.155000043 VPLSNENSQVPQS(ph)PEDWRK ddPTM_A459_MK2206_30min_R2 1 VPLSNENSQVPQSPEDWRK 19 1 Q8IZT6-2;Q8IZT6 Q8IZT6-2 ASPM Abnormal spindle-like microcephaly-associated protein 1 VPLSNENSQVPQS(1)PEDWRK 122.47 0.00021584 7018600 6043.5 5456.2 4995.1 5394.4 5263.3 5122.4 6982.2 3483.8 3870.6 4929 TRUE FALSE 6506.195007 5185.253042 5161.634141 4953.660264 5056.636396 5317.336521 6065.428753 3939.144622 4207.257792 4768.167134 1.364506492 1.087473005 1.08251955 1.038902397 1.060498983 1.115174106 1.272067145 0.826133923 0.882363741 1 12.21921909 -2.071462589 1.134656705 1.035510103 199.5151869 0.420639356 0.115589585 1016.716963 2.921551782 0.037557795 523252.9945 0.008482765 2.071462589 198.4796768 VPLT(ph)PTR ddPTM_A459_MK2206_30min_R1 2 VPLTPTR 7 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 VPLT(1)PTR;VPLT(1)PTR 123.21 0.017339 156682000 5401.8 4984.1 5072.9 4396.8 5411.6 4753 4975.5 4821.4 3881 3676.8 TRUE FALSE 4942.348544 4659.634184 4728.565682 4735.442298 5196.044513 5022.110753 4643.593473 4779.247008 4284.443838 4132.309742 1.196025674 1.127610096 1.144291202 1.145955311 1.257418934 1.215327762 1.123728317 1.15655585 1.036815753 1 12.01273268 -8.29724175 1.801673737 0.996631826 1.174894321 0.710097253 0.039416402 0.199328191 1.235183219 0.040098875 0.011786288 5.04E-09 8.29724175 0.178262495 VPMPSASAS(ph)RK ddPTM_A459_MK2206_30min_R1 1 VPMPSASASRK 11 1 H7C278 H7C278 DARS 1 VPMPSAS(0.006)AS(0.994)RK 69.276 0.035719 12679000 7963.2 8150.6 8039.7 6447.7 7959.1 7250.7 8698.4 7298.2 7006.1 7311.5 TRUE FALSE 7285.888024 7619.994459 7493.987564 6944.302971 7642.072193 7661.228368 8118.145607 7234.392607 7734.409167 8217.303819 0.886651898 0.927310785 0.91197645 0.845082904 0.929997523 0.932328722 0.987932999 0.880385193 0.941234417 1 13.00444939 -6.503420343 23.55298294 0.94201604 0.895464605 0.334881972 0.036422689 494.4536928 598500.9912 0.011292776 0.012600848 3.14E-07 6.503420343 -0.046551435 VPPAPVPCPPPS(ph)PGPSAVPSSPK ddPTM_A459_MK2206_30min_R1 1 VPPAPVPCPPPSPGPSAVPSSPK 23 0 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 1 VPPAPVPCPPPS(0.994)PGPS(0.004)AVPS(0.001)SPK 66.972 0.017973 0 2874.9 3196.4 2699 2563.8 2390.5 2258 2179.1 2149.5 2058.1 1783.4 TRUE FALSE 2630.374658 2988.313779 2515.7994 2761.26432 2295.281323 2385.846009 2033.736215 2130.707148 2272.04686 2004.341056 1.312338861 1.490920804 1.255175307 1.37764195 1.14515507 1.190339339 1.014665747 1.063046203 1.133563 1 10.9689123 -6.443150323 1.03193218 1.056328062 1.387899286 0.765266173 0.073866855 0.232653418 0.528806249 0.033736751 0.042632774 3.60E-07 6.443150323 0.331571224 VPPAPVPCPPPS(ph)PGPSAVPSSPK ddPTM_A459_MK2206_30min_R2 3 VPPAPVPCPPPSPGPSAVPSSPK 23 0 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 1 VPPAPVPCPPPS(0.993)PGPS(0.007)AVPSSPK;VPPAPVPCPPPS(0.987)PGPS(0.009)AVPS(0.003)S(0.001)PK;VPPAPVPCPPPS(0.999)PGPS(0.001)AVPSSPK 124.73 6.87E-06 23385000 149874 165013 148673 153799 151756 128354 155565 114669 122966 139626 TRUE FALSE 161348.4687 156818.6944 153629.6836 141233.1297 145797.2969 133238.6014 135139.1286 129656.632 133661.3604 135070.0151 1.19455431 1.16101782 1.137407763 1.045629037 1.079420158 0.986441005 1.000511687 0.959921652 0.98957093 1 17.04334791 -5.776481517 0.671203211 0.977572488 1.221955898 0.919498286 0.022377426 0.280948319 0.214773634 0.01193488 0.044128561 1.67E-06 5.776481517 0.24438341 VPPAVIIPPAAPLS(ph)GR ddPTM_A459_MK2206_30min_R2 2 VPPAVIIPPAAPLSGR 16 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 VPPAVIIPPAAPLS(1)GR;VPPAVIIPPAAPLS(1)GR 121.95 0.001484 2532800 2222.69 4233 2884.4 1748.56 2889.6 4225.6 6234 984.38 1301.76 4894.43 TRUE FALSE 2392.860855 4022.795375 2980.564456 1605.697055 2776.139785 4386.408169 5415.468312 1113.041846 1414.984732 4734.72515 0.505385377 0.849636515 0.629511611 0.339132052 0.586335996 0.926433537 1.143776701 0.235080561 0.29885256 1 12.20906496 VPPELLGGS(ph)PPWK ddPTM_A459_MK2206_30min_R1 2 VPPELLGGSPPWK 13 0 E7EVA0 E7EVA0 MAP4 Microtubule-associated protein 1 VPPELLGGS(1)PPWK;VPPELLGGS(1)PPWK 123.72 0.0023987 54080000 8024.6 9310 8764.2 8331.4 9014.3 8336.1 8098.8 8173.4 6888 6779.3 TRUE FALSE 7342.065631 8703.917308 8169.310522 8973.085872 8655.241343 8808.082778 7558.543829 8101.940826 7604.032249 7619.170865 0.963630526 1.142370668 1.072204662 1.17769847 1.135982051 1.156042164 0.99204283 1.063362532 0.998013089 1 12.89541829 -7.26784788 24.98385978 1.018634821 1.112365522 0.37897734 0.059033299 574.1459397 2238325.749 0.024039722 0.016663266 5.40E-08 7.26784788 0.093730701 VPPELLGGS(ph)PPWK ddPTM_A459_MK2206_30min_R2 1 VPPELLGGSPPWK 13 0 E7EVA0 E7EVA0 MAP4 Microtubule-associated protein 1 VPPELLGGS(1)PPWK 114.21 0.0043056 14609000 8824 10773 7770.9 10806 10869 8696.2 12790 12329 8902.9 10819 TRUE FALSE 9499.572225 10238.02849 8029.977928 9923.115233 10442.22845 9027.139985 11110.65764 13940.44263 9677.258149 10465.97692 0.907662257 0.978220052 0.767245905 0.948130816 0.997730889 0.862522444 1.061597759 1.3319772 0.924639738 1 13.35341936 -7.390019581 5.25088735 1.113865327 0.913259229 0.331514779 0.115512051 0.230834374 8.886579358 0.047713693 0.03158491 4.07E-08 7.390019581 -0.200606098 VPQALNFS(ph)PEESDSTFSK ddPTM_A459_MK2206_30min_R1 1 VPQALNFSPEESDSTFSK 18 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 VPQALNFS(0.991)PEES(0.005)DS(0.003)T(0.001)FSK 81.854 0.010083 7835100 2446.6 1817.4 1749.1 1658.1 1616 1645.4 1658.3 1523.3 1885.3 1771.6 TRUE FALSE 2238.503822 1699.08693 1630.375965 1785.807149 1551.631298 1738.561126 1547.677833 1509.981949 2081.283682 1991.079183 1.1242666 0.853349753 0.818840345 0.896904134 0.779291608 0.873175282 0.777306019 0.758373631 1.045304325 1 10.95933488 -4.761418771 21.17541681 0.85348512 1.124267841 0.413853611 0.090602725 0.079469549 64114.90811 0.021141314 0.117837922 1.73E-05 4.761418771 0.270782721 VPQALNFS(ph)PEESDSTFSK ddPTM_A459_MK2206_30min_R2 2 VPQALNFSPEESDSTFSK 18 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 VPQALNFS(0.989)PEES(0.011)DS(0.001)TFSK;VPQALNFS(0.995)PEES(0.003)DS(0.001)T(0.001)FSK 108.71 0.0014997 2652100 12474.1 10050.8 7712.3 8909.5 9915.1 10677.8 12121.1 9842.1 8675 10173.1 TRUE FALSE 13429.12669 9551.691887 7969.424233 8181.56535 9525.783355 11084.15116 10529.58501 11128.49626 9429.535819 9841.15258 1.36458881 0.970586708 0.809805982 0.831362514 0.967954036 1.1263062 1.069954451 1.130812288 0.958173928 1 13.26461158 -6.733964892 22.40019361 1.066031677 0.969146991 0.039672919 0.149863363 191.0677253 155776.9061 0.051748192 0.051725856 1.85E-07 6.733964892 -0.096884685 VPS(ph)GIFDVNSR ddPTM_A459_MK2206_30min_R2 2 VPSGIFDVNSR 11 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 VPS(0.857)GIFDVNS(0.143)R;VPS(1)GIFDVNSR 161.87 0.00061784 7522500 6215.5 10325.1 8473.1 8879.8 6844.6 10338.8 9056.7 4774.1 8665 8548.2 TRUE FALSE 6691.363459 9812.370548 8755.588925 8154.291935 6575.846613 10732.25028 7867.544411 5398.091262 9418.666037 8269.272934 0.809184013 1.186606202 1.058810006 0.986095392 0.795214605 1.297846904 0.951419124 0.652789103 1.138995667 1 13.01354477 -7.516571873 24.94227249 0.897956276 1.028219316 0.042952871 0.182039328 699.512958 2766451.745 0.079813699 0.048127897 3.04E-08 7.516571873 0.13026304 VPS(ph)PDHR ddPTM_A459_MK2206_30min_R1 1 VPSPDHR 7 0 Q8NAV1-2;Q8NAV1 Q8NAV1-2 PRPF38A Pre-mRNA-splicing factor 38A 1 VPS(1)PDHR 86.136 0.035301 6421800 4979.9 4114.6 4169.7 3395.4 3757.6 3027.4 4467.8 4663.2 1446.1 3676.5 TRUE FALSE 4556.333355 3846.738792 3886.672381 3656.914296 3607.926835 3198.808772 4169.761214 4622.430134 1596.42727 4131.972576 1.102701741 0.9309691 0.940633634 0.885028695 0.873172987 0.774160214 1.009145423 1.118698164 0.3863596 1 12.01261496 -1.522878956 0.769795809 0.869926623 46.93113354 0.127471693 0.185412526 939.325141 3.726197309 0.065580407 75210.27301 0.029999985 1.522878956 46.06120692 VPS(ph)PGMEEAGCSR ddPTM_A459_MK2206_30min_R1 4 VPSPGMEEAGCSR 13 0 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 VPS(1)PGMEEAGCSR;VPS(1)PGMEEAGCSR;VPS(1)PGMEEAGCSR;VPS(1)PGMEEAGCSR 136.33 0.0010997 288347000 2265.36 1985.71 1678.75 1466.26 1813.39 1590.69 2016.35 2047.36 1718.73 1693.4 TRUE FALSE 2072.679236 1856.439918 1564.801127 1579.191599 1741.158836 1680.753493 1881.842971 2029.460147 1897.398134 1903.191177 1.089054669 0.975435333 0.822198603 0.829759836 0.914862815 0.883123836 0.988782942 1.066345921 0.996956143 1 10.89420477 -7.436985335 4.698753703 1.024668071 0.913455551 0.285531272 0.073583475 0.293701375 11.23450475 0.035170532 0.022813995 3.66E-08 7.436985335 -0.11121252 VPS(ph)PGMEEAGCSR ddPTM_A459_MK2206_30min_R2 4 VPSPGMEEAGCSR 13 0 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 VPS(1)PGMEEAGCSR;VPS(1)PGMEEAGCSR;VPS(1)PGMEEAGCSR;VPS(1)PGMEEAGCSR 173.33 0.00015233 381793000 22755.2 29437 30345.5 33376.3 21523.1 32082 31543.1 22879.1 25965.5 29947.2 TRUE FALSE 24497.35561 27975.20139 31357.20382 30649.34952 20677.99495 33302.90299 27401.45308 25869.47693 28223.93226 28970.02532 0.845610431 0.965660233 1.082401671 1.057967647 0.71377207 1.149564166 0.945855338 0.892973915 0.974246034 1 14.82227332 VPS(ph)PPPAPEPPWHCGDR ddPTM_A459_MK2206_30min_R2 1 VPSPPPAPEPPWHCGDR 17 0 O15037 O15037 KHNYN Protein KHNYN 1 VPS(1)PPPAPEPPWHCGDR 72.015 0.01877 2724700 10826 10898 9872.7 12468 10581 9479.3 12055 10241 9804.5 8902.7 TRUE FALSE 11654.84688 10356.82117 10201.85089 11449.32452 10165.53677 9840.041404 10472.16402 11579.53386 10657.27769 8612.205628 1.353294079 1.202574766 1.184580505 1.329429999 1.180363918 1.142569259 1.215967717 1.344549162 1.237462056 1 13.07216705 -10.83577446 3.14622954 0.998361057 1.240364992 0.516474399 0.0706029 11881885.61 16393406.04 185420.0242 0.017704939 1.46E-11 10.83577446 0.242003935 VPS(ph)PPPGHK ddPTM_A459_MK2206_30min_R2 1 VPSPPPGHK 9 0 P11387 P11387 TOP1 DNA topoisomerase 1 1 VPS(1)PPPGHK 72.096 0.04527 3443600 39280 43971 37053 41976 26604 35421 56342 47409 24570 32769 TRUE FALSE 42287.307 41787.46408 38288.32853 38546.42653 25559.39329 36768.97098 48944.22772 53605.51908 26707.05419 31699.75021 1.333994959 1.31822692 1.207843225 1.215985182 0.806296362 1.159913587 1.543994113 1.691039163 0.842500462 1 14.95218385 VPS(ph)S(ph)DEEVVEEPQSR ddPTM_A459_MK2206_30min_R2 1 VPSSDEEVVEEPQSR 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 VPS(1)S(1)DEEVVEEPQSR 133.87 0.0091061 4838900 7954.3 10159 10097 11492 10386 10744 10593 6906.7 7468.6 9223.6 TRUE FALSE 8563.287324 9654.518833 10433.62894 10553.06684 9978.193455 11152.87045 9202.126376 7809.429404 8118.205328 8922.634687 0.959726317 1.082025564 1.169343956 1.182729901 1.118301242 1.249952603 1.031323897 0.875238052 0.909843966 1 13.12325406 -7.537625961 5.657882905 0.923396076 1.130253289 0.575294802 0.076584326 0.119011747 12.77713451 0.037214224 0.021975665 2.90E-08 7.537625961 0.206857213 VPS(ph)SDEEVVEEPQSR ddPTM_A459_MK2206_30min_R2 2 VPSSDEEVVEEPQSR 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 VPS(0.669)S(0.331)DEEVVEEPQSR;VPS(0.94)S(0.06)DEEVVEEPQSR 135.61 0.00040902 38820000 13200.7 11961.9 10382.13 15363.3 14278.9 16389.4 15692.7 14607.9 8998 12437.8 TRUE FALSE 14211.35574 11367.88944 10728.26503 14108.06925 13718.23864 17013.1101 13632.22964 16517.20269 9780.629775 12031.9556 1.181134323 0.944808127 0.891647658 1.172549975 1.14015037 1.413993756 1.13300199 1.372777895 0.812887788 1 13.55458353 -5.789034252 23.3655172 1.1748339 0.99975794 0.111114917 0.175645648 172.7836459 146300.7962 0.047838665 0.070983661 1.63E-06 5.789034252 -0.17507596 VPS(ph)TPPPK ddPTM_A459_MK2206_30min_R2 1 VPSTPPPK 8 0 Q9H7N4 Q9H7N4 SCAF1 "Splicing factor, arginine/serine-rich 19" 1 VPS(0.908)T(0.092)PPPK 82.287 0.041681 38487000 141010 163750 139170 166890 153450 147600 156130 129230 130310 150760 TRUE FALSE 151805.834 155618.4131 143809.8583 153254.5531 147424.782 153217.0214 135629.9435 146120.8047 141644.1283 145840.7135 1.040901613 1.06704369 0.98607484 1.050835185 1.010861634 1.050577837 0.929986834 1.001920528 0.971224871 1 17.154034 -7.242287001 24.93793912 0.975943097 1.03334999 0.50964047 0.028148344 637.2398385 829739.127 0.010272292 0.007943054 5.72E-08 7.242287001 0.057406893 VPS(ph)VESLFR ddPTM_A459_MK2206_30min_R1 2 VPSVESLFR 9 0 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 VPS(0.923)VES(0.077)LFR;VPS(1)VESLFR 133.91 0.0030091 107648000 2060.5 2081.19 1875.53 1844.29 2267.3 1845.15 2173.08 2040.84 2081.25 1920.46 TRUE FALSE 1885.243655 1945.704153 1748.224249 1986.337535 2176.98864 1949.620798 2028.117798 2022.997151 2297.603385 2158.381084 0.87345264 0.901464606 0.80997015 0.920290467 1.008621071 0.903279228 0.93964769 0.937275241 1.064503114 1 11.07573389 -6.69298428 0.410218326 1.015430696 0.846645989 0.506703389 0.048763282 1.333535238 0.457268293 0.051926611 0.090414578 2.03E-07 6.69298428 -0.168784707 VPS(ph)VESLFR ddPTM_A459_MK2206_30min_R2 3 VPSVESLFR 9 0 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 VPS(1)VESLFR;VPS(1)VESLFR;VPS(0.926)VES(0.074)LFR 133.91 0.0030091 45518000 4873.3 10379.5 7419.8 9734.8 12286.9 6901.91 13425 8595.3 12426.5 9137.4 TRUE FALSE 5246.403595 9864.069123 7667.172429 8939.4357 11804.45457 7164.567021 11662.28137 9718.735222 13507.33451 8839.247386 0.593535102 1.115939932 0.867401046 1.011334485 1.335459237 0.81054039 1.319374927 1.099498045 1.528109116 1 13.10970782 -4.074556956 0.45615347 1.208937308 3.06E-14 0.35662768 0.210572287 10.69066145 1.058443118 0.134557019 7.970615543 8.42E-05 4.074556956 -1.208937308 VPS(ph)WGLEDNVVCSQPAR ddPTM_A459_MK2206_30min_R1 3 VPSWGLEDNVVCSQPAR 17 0 H7C3L5;B8ZZD4;Q86VP1-3;Q86VP1-4;Q86VP1-2;Q86VP1 H7C3L5 TAX1BP1 Tax1-binding protein 1 1 VPS(1)WGLEDNVVCSQPAR;VPS(1)WGLEDNVVCSQPAR;VPS(1)WGLEDNVVCSQPAR 208.07 4.90E-09 49460000 1365.24 1513.32 1510.48 1245.43 1536.74 1157.05 1224.87 1208.3 1222.79 767.59 TRUE FALSE 1249.119169 1414.802593 1407.952826 1341.353234 1475.528392 1222.561171 1143.161157 1197.73596 1349.903396 862.6848442 1.447943797 1.639999361 1.632059304 1.554858931 1.710390998 1.417158513 1.325120251 1.388381827 1.564770038 1 9.7526898 -6.920380808 5.932303954 1.354393972 1.598209677 0.443339549 0.145618198 0.208725661 12.00106852 0.049360976 0.043397943 1.20E-07 6.920380808 0.243815704 VPS(ph)WGLEDNVVCSQPAR ddPTM_A459_MK2206_30min_R2 4 VPSWGLEDNVVCSQPAR 17 0 H7C3L5;B8ZZD4;Q86VP1-3;Q86VP1-4;Q86VP1-2;Q86VP1 H7C3L5 TAX1BP1 Tax1-binding protein 1 1 VPS(1)WGLEDNVVCSQPAR;VPS(1)WGLEDNVVCSQPAR;VPS(1)WGLEDNVVCSQPAR;VPS(1)WGLEDNVVCSQPAR 182.49 6.93E-08 28914000 8858.8 11919.5 9879.6 13021.5 17150 17090.9 9211.2 7955.3 10875.3 7102.8 TRUE FALSE 9537.036539 11327.59496 10208.98093 11957.6018 16476.60483 17741.30618 8001.758375 8995.085025 11821.21394 6871.036218 1.38800557 1.648600677 1.485799319 1.740290899 2.397979621 2.582042302 1.164563557 1.309130783 1.72044122 1 12.74631197 VPSAPGQES(ph)PIPDPK ddPTM_A459_MK2206_30min_R1 1 VPSAPGQESPIPDPK 15 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 VPS(0.013)APGQES(0.987)PIPDPK 96.666 0.010026 10265000 3675.3 3790.3 3800.6 3054.7 3149.8 2684.8 3279.9 3000 3359.1 2803.5 TRUE FALSE 3362.696435 3543.550781 3542.625861 3289.973523 3024.336796 2836.811056 3061.103856 2973.771316 3708.290466 3150.818745 1.06724528 1.124644439 1.12435089 1.044164641 0.959857434 0.900340923 0.971526483 0.943809072 1.176929162 1 11.62151105 -5.992518513 3.838139946 0.984220411 1.106403148 0.340540261 0.070091965 0.238722644 7.873955191 0.021060371 0.03063137 1.02E-06 5.992518513 0.122182737 VPSAPGQES(ph)PIPDPK ddPTM_A459_MK2206_30min_R2 2 VPSAPGQESPIPDPK 15 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 VPSAPGQES(1)PIPDPK;VPSAPGQES(1)PIPDPK 132.5 0.00061863 14503600 193346 187529 192643 203958 196149 173150 214087 174969 163915 221214 TRUE FALSE 208148.7184 178216.5826 199065.6215 187293.979 188447.2047 179739.3446 185977.1197 197838.0491 178172.0304 213995.8053 0.972676629 0.832804093 0.930231418 0.875222665 0.880611676 0.839919943 0.869068996 0.924494986 0.832595901 1 17.70722299 -10.6951198 4.609593114 1.000017873 0.883095079 0.386221163 0.043782367 7.44E-06 1.34E-06 0.039209497 0.009508247 2.02E-11 10.6951198 -0.116922794 VPSPLEGSEGDGDT(ph)D ddPTM_A459_MK2206_30min_R1 3 VPSPLEGSEGDGDTD 15 0 F5H1S9;Q9Y606-2;Q9Y606;F5H168 F5H1S9 PUS1 "tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial" 1 VPSPLEGSEGDGDT(1)D;VPSPLEGSEGDGDT(1)D;VPSPLEGSEGDGDT(1)D 229.56 6.95E-30 2249000 1674.79 1765.4 1709.8 1753.4 1821.88 1605.1 1992.26 1464.17 1314.34 1468.22 TRUE FALSE 1532.340316 1650.472139 1593.74354 1888.447172 1749.310662 1695.979375 1859.35997 1451.368916 1450.970346 1650.114178 0.928626841 1.000216931 0.965838341 1.144434244 1.060114921 1.027795166 1.126806857 0.879556661 0.87931512 1 10.68835014 -7.779166769 24.99978273 0.909576872 1.036919222 0.368761465 0.069556241 259.3464942 365734.2597 0.03885678 0.018728704 1.66E-08 7.779166769 0.12734235 VPSS(ph)DEEVVEEPQSR ddPTM_A459_MK2206_30min_R1 2 VPSSDEEVVEEPQSR 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 VPS(0.032)S(0.968)DEEVVEEPQSR;VPS(0.291)S(0.709)DEEVVEEPQSR 177.39 1.95E-05 18186900 1630.89 1594.21 1695.61 1497.61 1782.67 1603.61 1338.97 1261.19 1514.26 1419.02 TRUE FALSE 1492.174241 1490.426639 1580.516717 1612.956182 1711.662479 1694.405012 1249.649754 1250.163549 1671.672746 1594.818911 0.935638668 0.934542868 0.99103209 1.011372621 1.073264474 1.062443517 0.783568433 0.783890598 1.048189694 1 10.6391769 -7.248395342 24.98868031 0.885903058 1.001595215 0.215833324 0.08838917 1052.530014 2016351.901 0.034904024 0.026866027 5.64E-08 7.248395342 0.115692157 VPT(ph)ANVSVVDLTCR ddPTM_A459_MK2206_30min_R1 2 VPTANVSVVDLTCR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 VPT(1)ANVSVVDLTCR;VPT(1)ANVSVVDLTCR 157.84 0.00072567 59463000 490.27 585.89 626.06 499.5 639.84 551.3 694.97 373.77 651.06 582.56 TRUE FALSE 448.569962 547.7484545 583.5647915 537.9715765 614.3538179 582.5141296 648.6098193 370.5021683 718.7400168 654.7319309 0.685120033 0.836599574 0.891303393 0.821666931 0.938328786 0.889698672 0.990649438 0.565883762 1.097762279 1 9.35476053 -4.102769816 1.24410841 0.888259097 7.31E-09 0.18795986 0.133334956 11.68726622 4.644674035 0.036872285 20.12736689 7.89E-05 4.102769816 -0.88825909 VPT(ph)ANVSVVDLTCR ddPTM_A459_MK2206_30min_R2 3 VPTANVSVVDLTCR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 VPT(1)ANVSVVDLTCR;VPT(1)ANVSVVDLTCR;VPT(1)ANVSVVDLTCR 152.25 0.00090334 38262600 10957.2 24790.4 20399.2 24944.9 19721.5 23505.2 23384.2 18057.7 13742.1 25413.8 TRUE FALSE 11796.09166 23559.34478 21079.29915 22906.82188 18947.13482 24399.70686 20313.82645 20417.90339 14937.36302 24584.54979 0.479817274 0.958298809 0.857420589 0.931756818 0.770692772 0.992481338 0.826284257 0.830517686 0.607591481 1 14.58546432 -4.752300299 24.99423973 0.860446398 0.479816535 0.513597695 0.112085686 293.8647636 803625.0214 0.02699127 0.326921128 1.77E-05 4.752300299 -0.380629863 VPTANVS(ph)VVDLTCR ddPTM_A459_MK2206_30min_R1 1 VPTANVSVVDLTCR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 VPTANVS(1)VVDLTCR 221.85 5.77E-09 34056000 441.32 376.91 479.05 307.07 454.66 240.79 405.58 305.15 364.54 218.28 TRUE FALSE 403.7834165 352.3730905 446.5334207 330.7205846 436.5499294 254.4233217 378.5244982 302.4821057 402.4352375 245.3221743 1.645931183 1.436368691 1.820191843 1.34810718 1.779496414 1.037098756 1.542968952 1.232999449 1.640435638 1 7.938533833 -6.748305822 24.99987511 1.321029742 1.594164051 0.320281604 0.227214332 307.5965824 585512.5321 0.069669564 0.069264738 1.79E-07 6.748305822 0.273134309 VPTANVSVVDLT(ph)CR ddPTM_A459_MK2206_30min_R1 1 VPTANVSVVDLTCR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 VPTANVSVVDLT(1)CR 207.21 1.63E-05 10286000 619.21 436.86 451.54 533.42 592.04 396.31 500.45 403.38 515.03 380.46 TRUE FALSE 566.5429379 408.4203346 420.8907229 574.5041008 568.4577931 418.7487297 467.0658936 399.8532912 568.5692116 427.5942571 1.324954506 0.955158606 0.984322675 1.343573005 1.329432713 0.979313269 1.09231096 0.935123156 1.329693283 1 8.740098667 -6.78971015 24.99971842 1.064797313 1.171965734 0.118654707 0.160970278 575.4637614 508876.0908 0.058564341 0.051659075 1.62E-07 6.78971015 0.10716842 VPTANVSVVDLT(ph)CR ddPTM_A459_MK2206_30min_R2 1 VPTANVSVVDLTCR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 VPTANVS(0.002)VVDLT(0.998)CR 114.58 0.0068579 4903100 6240 8134 3753.3 7407.6 5853.9 5616.8 5479.1 3973.5 5021.9 5744.2 TRUE FALSE 6717.739198 7730.077388 3878.433149 6802.375384 5624.046473 5830.55126 4759.687588 4492.850093 5458.695784 5556.767224 1.208929388 1.391110528 0.69796574 1.224160579 1.012107624 1.04927038 0.856556951 0.808536675 0.98235099 1 12.44003009 -3.510428072 0.459981218 0.921274779 2.361217245 0.281939327 0.167960901 18.04183554 1.189782061 0.105065303 18.14437982 0.000308725 3.510428072 1.439942467 VPTANVSVVDLTCR ddPTM_A459_MK2206_30min_R1 2 VPTANVSVVDLTCR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 240.37 2.11E-18 158732000 828.68 766.75 730.83 621.62 808.29 812.07 944.71 617.72 610.99 747.87 FALSE TRUE 758.1964144 716.8344356 681.2232958 669.4972801 776.0940977 858.0487016 881.6901196 612.3193392 674.5045969 840.5217817 0.902054451 0.852844568 0.810476671 0.796525795 0.92334799 1.020852428 1.048979502 0.728499073 0.802483186 1 9.715141396 -4.423690725 11.79542082 0.883399049 1.17771778 0.000725647 0.102879352 1595247.189 4863465.064 0.027623699 11638100.98 3.77E-05 4.423690725 0.294318731 VPTANVSVVDLTCR ddPTM_A459_MK2206_30min_R2 2 VPTANVSVVDLTCR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 170 0.0023176 47074000 10174.1 7192.3 7324.1 9023.6 9735.5 9645.5 10034.1 6881.4 8923.9 6973.6 FALSE TRUE 10953.03692 6835.140841 7568.281839 8286.343015 9353.235353 10012.56626 8716.610617 7780.822607 9700.084691 6746.052003 1.623621774 1.01320607 1.121883115 1.228324806 1.38647543 1.484211248 1.292105459 1.153389064 1.437890589 1 12.71982772 -10.63857089 4.490270864 0.999971 1.29126229 0.210451617 0.17528062 125419715.9 1.282382185 40397.46968 0.042606727 2.30E-11 10.63857089 0.29129129 VPTTPAS(ph)PVK ddPTM_A459_MK2206_30min_R1 3 VPTTPASPVK 10 0 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 VPT(0.078)T(0.455)PAS(0.467)PVK;VPTT(0.028)PAS(0.972)PVK;VPTT(0.011)PAS(0.989)PVK 145.23 0.00090917 37916300 9963.3 11135.6 11041.3 8871.5 8378.2 8423.8 10475.2 8181.5 11065.3 11622.2 TRUE FALSE 9115.869016 10410.67042 10291.84732 9554.784467 8044.478553 8900.748276 9776.418521 8109.970008 12215.57753 13062.04588 0.697889833 0.797016831 0.78792001 0.731492184 0.615866659 0.681420687 0.748459974 0.620880533 0.935196343 1 13.67309326 -8.396751352 4.957126957 0.996000198 0.714059286 0.75900382 0.058401054 0.108536389 3.628196486 0.059983078 0.015641324 4.01E-09 8.396751352 -0.281940913 VPTTPAS(ph)PVK ddPTM_A459_MK2206_30min_R2 1 VPTTPASPVK 10 0 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 VPTT(0.028)PAS(0.972)PVK 118.61 0.0056592 11698000 60303 54571 70436 52775 55137 48625 75921 62980 38748 74314 TRUE FALSE 64919.84405 51861.08349 72784.30109 48463.11368 52972.04434 50475.45845 65952.4815 71211.70224 42118.231 71889.14027 0.903054951 0.721403585 1.012451962 0.674136782 0.736857391 0.702129115 0.917419255 0.990576629 0.585877517 1 16.13348623 -9.75120967 9.606724236 1 0.808432244 0.154289378 0.13681938 0 0 0.128716786 0.031218406 1.77E-10 9.75120967 -0.191567756 VPVAS(ph)PSAHNISSSGGAPDR ddPTM_A459_MK2206_30min_R2 2 VPVASPSAHNISSSGGAPDR 20 0 Q7KZI7-14;E9PC69;Q7KZI7-13;E7ETY4;Q7KZI7-15;Q7KZI7-16;Q7KZI7-3;Q7KZI7-9;Q7KZI7-8;Q7KZI7-11;Q7KZI7-6;Q7KZI7;Q7KZI7-12;Q7KZI7-4;Q7KZI7-5;Q7KZI7-2;Q7KZI7-7;Q7KZI7-10 Q7KZI7-14 MARK2 Serine/threonine-protein kinase MARK2 1 VPVAS(0.988)PS(0.012)AHNISSSGGAPDR;VPVAS(0.993)PS(0.007)AHNISSSGGAPDR 119.25 0.00016888 24698000 29278 46070 31372 64855 47576 77222 63339 38074 40227 42232 TRUE FALSE 31519.54619 43782.23079 32417.92682 59556.13904 45707.92719 80160.73732 55022.51322 43050.40253 43725.87175 40853.9733 0.771517276 1.071676198 0.793507319 1.457780828 1.118812284 1.962128304 1.34680935 1.053762928 1.070296674 1 15.31818878 -5.75806254 24.99827513 1.312928509 0.898177806 0.310998844 0.276103886 109.0711181 807422.0264 0.078693787 0.12949987 1.75E-06 5.75806254 -0.414750702 VPVASPS(ph)AHNISSSGGAPDR ddPTM_A459_MK2206_30min_R1 4 VPVASPSAHNISSSGGAPDR 20 0 Q7KZI7-14;E9PC69;Q7KZI7-13;E7ETY4;Q7KZI7-15;Q7KZI7-16;Q7KZI7-3;Q7KZI7-9;Q7KZI7-8;Q7KZI7-11;Q7KZI7-6;Q7KZI7;Q7KZI7-12;Q7KZI7-4;Q7KZI7-5;Q7KZI7-2;Q7KZI7-7;Q7KZI7-10 Q7KZI7-14 MARK2 Serine/threonine-protein kinase MARK2 1 VPVAS(0.001)PS(0.999)AHNISSSGGAPDR;VPVAS(0.001)PS(0.999)AHNISSSGGAPDR;VPVAS(0.068)PS(0.931)AHNISSSGGAPDR;VPVAS(0.009)PS(0.991)AHNISSSGGAPDR 261.02 1.19E-47 44570300 3145.35 2658.49 2706.8 2272.72 3490.92 3626.04 3331.14 2364.84 2298.56 2214.74 TRUE FALSE 2877.821466 2485.421818 2523.069958 2447.765288 3351.869264 3831.343251 3108.925729 2344.164453 2537.503537 2489.118712 1.156160794 0.998514778 1.013639866 0.983386319 1.346608841 1.539236853 1.249006612 0.941764827 1.019438537 1 11.28141932 -3.205036829 15.81934233 1.133769762 44.41580504 0 0.186187293 0 1.06E-17 0.047713987 0 0.000623682 3.205036829 43.28203528 VPVASPS(ph)AHNISSSGGAPDR ddPTM_A459_MK2206_30min_R2 1 VPVASPSAHNISSSGGAPDR 20 0 Q7KZI7-14;E9PC69;Q7KZI7-13;E7ETY4;Q7KZI7-15;Q7KZI7-16;Q7KZI7-3;Q7KZI7-9;Q7KZI7-8;Q7KZI7-11;Q7KZI7-6;Q7KZI7;Q7KZI7-12;Q7KZI7-4;Q7KZI7-5;Q7KZI7-2;Q7KZI7-7;Q7KZI7-10 Q7KZI7-14 MARK2 Serine/threonine-protein kinase MARK2 1 VPVAS(0.016)PS(0.984)AHNISSSGGAPDR 74.408 0.0042904 9384600 105850 107290 102300 135890 134040 125930 139060 98460 110020 103740 TRUE FALSE 113953.9574 101962.1346 105710.6309 124787.3523 128776.9161 130722.3544 120801.255 111329.0601 119589.3407 100354.9723 1.135508832 1.016014775 1.053367148 1.243459586 1.283214106 1.302599676 1.203739607 1.109352706 1.191663333 1 16.61475257 -5.754053825 24.99265309 1.20420805 1.063068662 0.2834631 0.087106477 192.1206333 650127.5149 0.024063218 0.040623132 1.76E-06 5.754053825 -0.141139388 VPVHDVTDASK ddPTM_A459_MK2206_30min_R2 1 VPVHDVTDASK 11 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 155.26 0.00074744 11906000 63945 71340 61423 64133 64849 55531 64905 58950 52972 62379 FALSE TRUE 68840.67837 67797.35934 63470.81216 58893.12875 62302.70242 57644.27112 56382.89554 66654.96741 57579.40881 60343.57834 1.140812001 1.123522357 1.051823805 0.975963481 1.032466157 0.955267697 0.934364469 1.104590898 0.954192814 1 15.88091263 -5.398231134 2.340742142 0.995536199 1.138689076 0.590159164 0.045851398 0.214637644 2.244361722 0.012799398 0.035747482 4.00E-06 5.398231134 0.143152877 VPVLIS(ph)PTLK ddPTM_A459_MK2206_30min_R1 2 VPVLISPTLK 10 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 VPVLIS(0.971)PT(0.029)LK;VPVLIS(0.975)PT(0.025)LK 168.85 0.00025321 35315000 10717.7 10447.9 10762.2 8349.1 7594.6 6241.7 8394.8 7593.6 8186.7 8498.6 TRUE FALSE 9806.103334 9767.739811 10031.69185 8992.149129 7292.091 6595.09966 7834.798209 7527.209956 9037.736761 9551.470729 1.026658994 1.02264249 1.050277191 0.941441311 0.763452164 0.690480016 0.820271394 0.788068159 0.94621415 1 13.22150718 -6.031817297 3.883246798 0.817009838 1.029943778 0.524007313 0.08413213 0.163288583 5.323730318 0.025151778 0.035273859 9.29E-07 6.031817297 0.21293394 VPVLIS(ph)PTLK ddPTM_A459_MK2206_30min_R2 2 VPVLISPTLK 10 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 VPVLIS(0.998)PT(0.002)LK;VPVLIS(0.991)PT(0.009)LK 140.63 0.0013973 34189000 116169 117892 106335 114950 97210 76552 112945 86915 68519 90928 TRUE FALSE 125062.988 112037.6547 109880.1558 105558.2173 93393.04696 79465.24 98115.18583 98275.08892 74478.65877 87961.02681 1.421800001 1.273719268 1.249191373 1.200056674 1.061754852 0.903414192 1.115439296 1.117257182 0.84672339 1 16.42457683 -5.699340166 0.807668899 0.998445372 1.417712641 0.741878419 0.084589734 0.505215536 0.564222937 0.0397428 0.151911656 2.00E-06 5.699340166 0.419267269 VPVNLLNS(ph)PDCDVK ddPTM_A459_MK2206_30min_R1 1 VPVNLLNSPDCDVK 14 0 P33981-2;P33981 P33981-2 TTK Dual specificity protein kinase TTK 1 VPVNLLNS(1)PDCDVK 113.11 0.0044533 0 1588.6 1402.3 1357.6 1214.2 1218.2 986.58 1228.8 1307.9 1410.3 1489 TRUE FALSE 1453.481228 1311.010015 1265.449894 1307.717894 1169.676514 1042.439307 1146.828994 1296.465168 1556.905732 1673.468561 0.868544089 0.783408811 0.756183847 0.781441567 0.698953384 0.622921357 0.685300591 0.774717373 0.930346567 1 10.70862573 -8.317995838 2.771864692 0.995114847 0.739028406 0.669871716 0.062579522 0.169409934 2.42079914 0.065542687 0.018263629 4.81E-09 8.317995838 -0.256086441 VPVPGPGS(ph)GGNGPER ddPTM_A459_MK2206_30min_R2 3 VPVPGPGSGGNGPER 15 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 VPVPGPGS(1)GGNGPER;VPVPGPGS(1)GGNGPER;VPVPGPGS(1)GGNGPER 134.25 0.00046733 82540000 48977 47164 50195 52922 43714.8 47706.8 56002 48912.6 38675 42310 TRUE FALSE 52726.71678 44821.90434 51868.47625 48598.10331 41998.3373 49522.3157 48648.87013 55305.64476 42038.88159 40929.42817 1.288234875 1.095102139 1.267266086 1.187363359 1.026115907 1.209943992 1.188603709 1.351244013 1.027106497 1 15.32085089 -8.440543844 9.609800546 1.000057289 1.193801816 0.42237174 0.087917833 0.378591469 41.02159983 0.083550266 0.021581654 3.63E-09 8.440543844 0.193744527 VPY(ph)S(ph)SLRR ddPTM_A459_MK2206_30min_R1 1 VPYSSLRR 8 1 I3L2J0;A0A0A0MQR4;Q96RK0;I3L135;I3L1Q4 I3L2J0 CIC Protein capicua homolog 2 VPY(0.993)S(0.995)S(0.012)LRR 57.047 0.045764 0 248.89 179.71 203.56 205.13 172.49 183.01 249.37 348.86 0 0 TRUE FALSE 227.7205985 168.0108463 189.7429144 220.9291481 165.619358 193.371868 232.7349823 345.8099538 0 0 0 VPYS(ph)QEVCPPR ddPTM_A459_MK2206_30min_R1 1 VPYSQEVCPPR 11 0 K7EMY1 K7EMY1 KEAP1 1 VPY(0.024)S(0.976)QEVCPPR 69.229 0.036336 22533000 0 0 67.893 0 0 0 0 124.23 0 0 TRUE FALSE 0 0 63.28461232 0 0 0 0 123.1438702 0 0 0 VQAEDEANGLQTTPAS(ph)R ddPTM_A459_MK2206_30min_R1 2 VQAEDEANGLQTTPASR 17 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 VQAEDEANGLQTT(0.082)PAS(0.917)R;VQAEDEANGLQT(0.023)T(0.009)PAS(0.968)R 199.91 5.75E-08 5932700 1675.25 1353.5 1481.09 1393.35 1843.42 1397.74 1688.64 1247.17 1119.95 928.3 TRUE FALSE 1532.76119 1265.386904 1380.557737 1500.666058 1769.992678 1476.878831 1575.993907 1236.266124 1236.37281 1043.304812 1.469140344 1.212864054 1.323254452 1.438377395 1.696524982 1.415577512 1.510578585 1.184952 1.185054258 1 10.026945 -7.876760663 4.631602074 1.12027161 1.433648447 0.572777781 0.125426457 0.179500997 6.370545748 0.079210054 0.036456171 1.33E-08 7.876760663 0.313376837 VQAGPGS(ph)PR ddPTM_A459_MK2206_30min_R1 3 VQAGPGSPR 9 0 I3L0U5;Q6PK04;I3L4F6 I3L0U5 CCDC137 Coiled-coil domain-containing protein 137 1 VQAGPGS(1)PR;VQAGPGS(1)PR;VQAGPGS(1)PR 118.23 0.0072794 300034000 15288.8 14725.2 14663.1 12566.9 14851.3 13998 14224.1 13851.1 9402.3 10741.1 TRUE FALSE 13988.40728 13766.5868 13667.80963 13534.80482 14259.74127 14790.55466 13275.23624 13730.00129 10379.70273 12071.78856 1.158768413 1.140393301 1.13221082 1.121192999 1.181245116 1.225216511 1.099690918 1.137362639 0.85983139 1 13.55935182 -8.246635527 23.11329021 0.92991574 1.149606428 0.790386244 0.04523465 105.6236269 164912.0807 0.030319966 0.011324229 5.67E-09 8.246635527 0.219690688 VQAGPGS(ph)PR ddPTM_A459_MK2206_30min_R2 3 VQAGPGSPR 9 0 I3L0U5;Q6PK04;I3L4F6 I3L0U5 CCDC137 Coiled-coil domain-containing protein 137 1 VQAGPGS(1)PR;VQAGPGS(1)PR;VQAGPGS(1)PR 102.95 0.01567 552170000 383589 480170 465630 501976 475080 489600 503850 445080 443650 411250 TRUE FALSE 412956.8688 456325.456 481153.8718 460962.9551 456425.9721 508232.0711 437693.8898 503253.4842 482237.8751 397830.9462 1.03802098 1.147033584 1.209443047 1.158690543 1.147286244 1.277507635 1.100200711 1.264993307 1.212167831 1 18.60179598 -4.793978674 3.186126496 1.180729527 1.01925733 0.203396593 0.076873751 0.456261177 7.157538062 0.018078173 0.183067682 1.61E-05 4.793978674 -0.161472198 VQAGPGS(ph)PRR ddPTM_A459_MK2206_30min_R2 4 VQAGPGSPRR 10 1 I3L0U5;Q6PK04;I3L4F6 I3L0U5 CCDC137 Coiled-coil domain-containing protein 137 1 VQAGPGS(1)PRR;VQAGPGS(1)PRR;VQAGPGS(1)PRR;VQAGPGS(1)PRR 86.288 0.018107 11990000 26433.4 59913 40609.2 54850 60360 66212 50419.6 34990.5 62549 37957.2 TRUE FALSE 28457.16143 56937.80754 41963.09046 50368.57954 57989.96312 68731.74406 43799.44596 39563.87849 67989.39896 36718.65967 0.775005452 1.550650488 1.142827403 1.371743413 1.579305008 1.871847847 1.192838909 1.077487001 1.851630739 1 15.16422578 -5.899167802 4.79963689 1.445713923 1.197057651 0.117519056 0.32697809 0.504904238 19.4653516 0.092489988 0.140203298 1.26E-06 5.899167802 -0.248656272 VQAYEEPSVAS(ph)SPNGK ddPTM_A459_MK2206_30min_R1 4 VQAYEEPSVASSPNGK 16 0 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 VQAYEEPSVAS(0.5)S(0.5)PNGK;VQAYEEPSVAS(0.951)S(0.049)PNGK;VQAYEEPSVAS(0.5)S(0.5)PNGK;VQAYEEPSVAS(0.5)S(0.5)PNGK 303.07 3.00E-88 405715000 37930.4 39346.3 39550.3 33349.4 35314.7 30869.6 36277.2 34559.4 34714.3 31219.6 TRUE FALSE 34704.2203 36784.84872 36865.73583 35917.97657 33908.04072 32617.41008 33857.21418 34257.25081 38322.97571 35087.31974 0.989081542 1.048380127 1.050685436 1.023673989 0.966390165 0.929606773 0.964941592 0.976342766 1.092217245 1 15.09866213 -4.438679477 21.94011917 1.003112253 0.000580939 0.008554817 0.046486268 355.8869846 1056033.839 0.01221379 220153.3534 3.64E-05 4.438679477 -1.002531313 VQAYEEPSVAS(ph)SPNGK ddPTM_A459_MK2206_30min_R2 3 VQAYEEPSVASSPNGK 16 0 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 VQAYEEPSVAS(0.948)S(0.052)PNGK;VQAYEEPSVAS(0.994)S(0.006)PNGK;VQAYEEPSVAS(0.726)S(0.274)PNGK 182.7 9.06E-07 576084000 480990 529670 523290 525570 532680 453590 610370 452340 441893 570010 TRUE FALSE 517814.9642 503367.358 540736.2274 482629.2498 511764.3067 470851.6853 530227.6858 511462.3911 480328.0544 551410.6204 0.939073252 0.912872076 0.980641662 0.875262884 0.928100199 0.853903911 0.961584101 0.927552666 0.871089596 1 19.07276753 -10.80791023 4.077749243 1.000100401 0.917357604 0.299417254 0.038224275 5071674033 889228366.3 4928088.451 0.008904354 1.56E-11 10.80791023 -0.082742797 VQAYEEPSVASS(ph)PNGK ddPTM_A459_MK2206_30min_R2 4 VQAYEEPSVASSPNGK 16 0 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 VQAYEEPSVAS(0.232)S(0.768)PNGK;VQAYEEPSVAS(0.045)S(0.955)PNGK;VQAYEEPSVAS(0.211)S(0.789)PNGK;VQAYEEPSVAS(0.228)S(0.772)PNGK 210.2 4.81E-08 79617000 455021 501491 513117 519954 538626 435418 567771 420036 444976 545012 TRUE FALSE 489857.7576 476587.6862 530224.0647 477472.0949 517476.8369 451988.1371 493221.9857 474936.1474 483679.2081 527228.3031 0.929118856 0.903949358 1.005682096 0.905626826 0.981504282 0.85729111 0.935499826 0.900816866 0.91739993 1 19.00806829 VQDDEVGDGTTSVTVLAAELLR ddPTM_A459_MK2206_30min_R1 2 VQDDEVGDGTTSVTVLAAELLR 22 0 F8VQ14;F5GWF6;P78371-2;P78371 F8VQ14 CCT2 T-complex protein 1 subunit beta 0 ; 202.96 1.69E-21 2822400 1264.15 1359.51 1587.55 1711.78 1902.03 1701.84 1309.15 1188.01 1016.53 1074.46 FALSE TRUE 1156.627404 1271.005652 1479.791529 1843.621592 1826.268117 1798.19671 1221.818992 1177.623354 1122.201931 1207.572217 0.957812202 1.052529724 1.225426942 1.526717464 1.512346916 1.489100764 1.011797866 0.975199112 0.929304199 1 10.23789375 -7.389525654 6.653452066 0.970340492 1.299782367 0.428162891 0.178619904 0.279174311 13.88217889 0.087800627 0.058733894 4.08E-08 7.389525654 0.329441875 VQDT(ph)SNTGLGEDIIHQLSK ddPTM_A459_MK2206_30min_R1 1 VQDTSNTGLGEDIIHQLSK 19 0 Q8IWA0 Q8IWA0 WDR75 WD repeat-containing protein 75 1 VQDT(0.869)S(0.122)NT(0.008)GLGEDIIHQLSK 186.69 3.31E-15 92501000 6733.2 6201.4 6149.4 5524.4 6687.5 5903.8 6791.3 6297 5979.8 4977.5 TRUE FALSE 6160.505983 5797.687733 5731.995861 5949.890245 6421.122714 6238.068054 6338.264768 6241.945993 6601.421609 5594.150278 1.101240703 1.036383981 1.024641023 1.063591421 1.147828069 1.115105556 1.133016536 1.115798769 1.180057968 1 12.44970329 -6.144824595 5.591552126 1.121773029 1.051228922 0.263126717 0.047515983 0.262700647 11.10041368 0.013262334 0.01727853 7.16E-07 6.144824595 -0.070544107 VQDTS(ph)NTGLGEDIIHQLSK ddPTM_A459_MK2206_30min_R1 3 VQDTSNTGLGEDIIHQLSK 19 0 Q8IWA0 Q8IWA0 WDR75 WD repeat-containing protein 75 1 VQDT(0.244)S(0.729)NT(0.028)GLGEDIIHQLSK;VQDT(0.205)S(0.683)NT(0.112)GLGEDIIHQLSK;VQDT(0.061)S(0.833)NT(0.107)GLGEDIIHQLSK 179.44 3.83E-13 141269000 23460.1 21173.7 23404.2 19382.5 23369.1 20459.7 23193.8 21050.6 20444.8 19920.1 TRUE FALSE 21464.6953 19795.28828 21815.58811 20875.34351 22438.25926 21618.11053 21646.58392 20866.55682 22570.11012 22387.95238 0.958760986 0.884193782 0.974434274 0.93243648 1.002247052 0.965613566 0.966885384 0.932044006 1.008136418 1 14.45043496 -1.522878745 0.150245344 1.00301024 0.714704871 0.280263986 0.030843138 90.07796937 0.890092848 0.106381896 5.659916132 0.03 1.522878745 -0.288305368 VQDTS(ph)NTGLGEDIIHQLSK ddPTM_A459_MK2206_30min_R2 4 VQDTSNTGLGEDIIHQLSK 19 0 Q8IWA0 Q8IWA0 WDR75 WD repeat-containing protein 75 1 VQDT(0.05)S(0.699)NT(0.251)GLGEDIIHQLSK;VQDT(0.144)S(0.719)NT(0.137)GLGEDIIHQLSK;VQDT(0.115)S(0.761)NT(0.124)GLGEDIIHQLSK;VQDT(0.068)S(0.835)NT(0.097)GLGEDIIHQLSK 189.52 1.82E-15 155405000 184963 225794 193671 221179 234669 224933 244309 165163 188673 220580 TRUE FALSE 199123.9095 214581.3983 200127.8945 203107.9682 225454.7159 233492.9829 212230.9348 186750.3712 205083.4365 213382.4927 0.933178289 1.005618575 0.937883385 0.951849262 1.05657551 1.094246206 0.994603316 0.875190691 0.961107136 1 17.70308229 -9.248263328 0.002343757 1.250683689 0.716565528 0.002487168 0.060154231 2047643.241 1700.711101 195169.7258 192397.6275 5.65E-10 9.248263328 -0.534118161 VQDTSNT(ph)GLGEDIIHQLSK ddPTM_A459_MK2206_30min_R2 1 VQDTSNTGLGEDIIHQLSK 19 0 Q8IWA0 Q8IWA0 WDR75 WD repeat-containing protein 75 1 VQDT(0.242)S(0.323)NT(0.434)GLGEDIIHQLSK 86.856 0.0047231 3277200 25107 31494 29267 33270 32516 32896 32950 21853 28042 29090 TRUE FALSE 27029.21122 29930.05376 30242.74717 30551.73457 31239.25846 34147.88033 28623.62542 24709.26213 30481.04247 28140.79568 0.960499182 1.063582355 1.074694103 1.085674155 1.110105727 1.213465345 1.017157643 0.878058404 1.083162069 1 14.7803755 -7.512864738 24.99004948 0.977887742 1.087030916 0.266161714 0.074006619 602.2298469 1502881.987 0.033125063 0.020594705 3.07E-08 7.512864738 0.109143174 VQEHEDS(ph)GDS(ph)EVENEAK ddPTM_A459_MK2206_30min_R2 3 VQEHEDSGDSEVENEAK 17 0 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 2 VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK 161.55 0.00050021 40774000 71817 76414 69143 71977 74665 57449 81681 57957 59626 81428 TRUE FALSE 77315.36474 72619.39188 71448.19311 66096.24886 71733.27694 59635.26195 70956.18658 65532.1789 64812.1617 78771.01103 0.981520533 0.921905038 0.907036639 0.83909357 0.910655786 0.757071176 0.900790604 0.831932687 0.822792051 1 16.26537717 -4.978282831 1.107338957 0.856938349 1.01337957 0.2417419 0.061821436 1.56186928 2.000086178 0.018614429 0.264537507 1.05E-05 4.978282831 0.156441221 VQEHEDS(ph)GDSEVENEAK ddPTM_A459_MK2206_30min_R1 2 VQEHEDSGDSEVENEAK 17 0 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 VQEHEDS(0.979)GDS(0.021)EVENEAK;VQEHEDS(0.61)GDS(0.39)EVENEAK 240.82 5.12E-30 10352000 2690.34 2801.75 3494.78 2541.85 2564.96 2238.16 2749.54 2700.42 2650.15 2451.55 TRUE FALSE 2461.512455 2619.355566 3257.564071 2737.623727 2462.792212 2364.882685 2566.123203 2676.810513 2925.642576 2755.266522 0.893384519 0.950672301 1.182304523 0.993596701 0.893848995 0.858313585 0.931352079 0.971525074 1.061836506 1 11.42797616 -3.908981925 21.23223239 0.972003225 0.979257051 0 0.089927095 0 0 0.022192574 0 0.000123316 3.908981925 0.007253826 VQEHEDS(ph)GDSEVENEAK ddPTM_A459_MK2206_30min_R2 3 VQEHEDSGDSEVENEAK 17 0 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 VQEHEDS(0.999)GDS(0.001)EVENEAK;VQEHEDS(0.98)GDS(0.02)EVENEAK;VQEHEDS(0.999)GDS(0.001)EVENEAK 256.66 5.15E-40 88628000 157730 172810 153050 156691 139114 113918 178283 155858 133995 182020 TRUE FALSE 169805.9301 164228.5067 158152.6106 143888.8441 133651.6854 118253.2293 154874.2279 176229.1757 145649.6429 176080.7023 0.964364225 0.932688844 0.89818253 0.817175546 0.759036531 0.671585402 0.879563893 1.000843212 0.8271755 1 17.42587728 -10.27389179 11.50597874 0.999989617 0.859144801 0.166748459 0.092996143 0 0 0.099979291 0.02424854 5.32E-11 10.27389179 -0.140844816 VQEKPDS(ph)PGGSTQIQR ddPTM_A459_MK2206_30min_R1 1 VQEKPDSPGGSTQIQR 16 1 M0R300;M0R0P8;Q13459-2;Q13459 M0R300 MYO9B Unconventional myosin-IXb 1 VQEKPDS(0.983)PGGS(0.007)T(0.009)QIQR 193.19 5.45E-06 8221800 1256.9 1753.3 1405.6 1070.3 1100.1 1050.2 1172.9 1217.4 1358.7 1192.4 TRUE FALSE 1149.994055 1639.159851 1310.191788 1152.734691 1056.280687 1109.661416 1094.657981 1206.7564 1499.941727 1340.123514 0.858125421 1.223140878 0.97766495 0.860170484 0.788196518 0.828029211 0.81683365 0.900481476 1.119256331 1 10.38815026 -5.539869923 6.865143738 0.888284913 1.055369384 0.164329734 0.123539144 0.2046694 42.75467106 0.033257096 0.059935982 2.88E-06 5.539869923 0.167084471 VQEKPDSPGGS(ph)TQIQR ddPTM_A459_MK2206_30min_R2 2 VQEKPDSPGGSTQIQR 16 1 M0R300;M0R0P8;Q13459-2;Q13459 M0R300 MYO9B Unconventional myosin-IXb 1 VQEKPDS(0.047)PGGS(0.477)T(0.477)QIQR;VQEKPDS(0.016)PGGS(0.492)T(0.492)QIQR 59.634 0.041726 121951000 204144 194517 184514 200996 209073 162284 214862 148343 166929 170373 TRUE FALSE 219773.4216 184857.5686 190665.6047 184573.9838 200863.7435 168459.8313 186650.3613 167731.9394 181448.1827 164813.743 1.333465387 1.121615014 1.156855012 1.119894376 1.218731763 1.022122478 1.132492703 1.017706026 1.100928718 1 17.33047702 -1.522878745 0.220279718 1.020500768 2.302203201 0.570705845 0.062702678 38.83063378 0.496775525 0.094088189 17.69820338 0.03 1.522878745 1.281702433 VQFPSWNGLGSIPS(ph)T(ph)DIY(ph)KS(ph)T(ph)KNYK ddPTM_A459_MK2206_30min_R1 1 VQFPSWNGLGSIPSTDIYKSTKNYK 25 2 A0A2R8Y4W7;O43511-2;O43511 A0A2R8Y4W7 SLC26A4 Pendrin 5 VQFPS(0.282)WNGLGS(0.244)IPS(0.742)T(0.739)DIY(0.979)KS(0.901)T(0.901)KNY(0.212)K 43.497 0.031548 8665900 1480.2 1998.5 1880.2 1395.7 1033.1 990.6 1293.4 1855.6 1901 2099.4 TRUE FALSE 1354.301217 1868.397287 1752.577263 1503.197056 991.9494394 1046.686916 1207.119646 1839.376685 2098.615753 2359.489522 0.573980602 0.791865049 0.74277815 0.637085709 0.420408495 0.443607359 0.511602037 0.779565524 0.889436352 1 11.20425905 -8.099808778 2.433742619 0.961822845 0.593370784 0.609797049 0.114729096 0.24203478 2.583425985 0.114198018 0.036322289 7.95E-09 8.099808778 -0.368452061 VQGEAVSNIQENTQTPTVQEES(ph)EEEEVDETGVEVK ddPTM_A459_MK2206_30min_R1 2 VQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVK 35 0 E9PAV3;F8VZJ2;F8W0W4;H0YHX9;Q13765;E9PAV3-2 E9PAV3 NACA "Nascent polypeptide-associated complex subunit alpha, muscle-specific form;Nascent polypeptide-associated complex subunit alpha" 1 VQGEAVSNIQENTQT(0.001)PT(0.413)VQEES(0.587)EEEEVDETGVEVK;VQGEAVSNIQENTQT(0.001)PT(0.17)VQEES(0.829)EEEEVDETGVEVK 137.25 2.76E-26 23200000 5740.7 6950.2 6731.7 5484 5491.9 4858.7 6107.2 5442.3 6032.1 5687.7 TRUE FALSE 5252.423319 6497.740717 6274.77096 5906.37863 5273.145994 5133.795395 5699.799831 5394.718545 6659.158381 6392.335216 0.8216752 1.016489358 0.981608559 0.923978238 0.824917001 0.803117362 0.891661598 0.843935489 1.04174111 1 12.64212735 -8.268947732 24.93185029 1.020870574 0.892130684 0.382760423 0.067145234 729.9613704 2423838.539 0.066104862 0.018410837 5.38E-09 8.268947732 -0.12873989 VQGGHS(ph)PDDHR ddPTM_A459_MK2206_30min_R2 2 VQGGHSPDDHR 11 0 A2AJT9-3;A2AJT9-2;A2AJT9 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 VQGGHS(1)PDDHR;VQGGHS(1)PDDHR 85.976 0.022566 10127500 46086 23675 26040 31456 39900 26566 33396 95229 63138 35884 TRUE FALSE 49614.37959 22499.33393 26908.1606 28885.94418 38333.32552 27576.98775 29011.06508 107675.7573 68629.62911 34713.10802 1.4292693 0.64815095 0.775158496 0.832133618 1.104289639 0.794425775 0.835738047 3.101876018 1.977052273 1 15.08319292 -7.731051878 24.99998388 2.154598402 0.900447768 0.485636366 0.517938808 133.9560776 110206.5559 0.227950955 0.131587452 1.86E-08 7.731051878 -1.254150634 VQGGVPAGS(ph)DEYEDECPHLIALSSLNR ddPTM_A459_MK2206_30min_R1 3 VQGGVPAGSDEYEDECPHLIALSSLNR 27 0 Q9BVS4-2;Q9BVS4;H0Y919;H0Y8R4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 VQGGVPAGS(0.994)DEY(0.006)EDECPHLIALSSLNR;VQGGVPAGS(0.971)DEY(0.029)EDECPHLIALSSLNR;VQGGVPAGS(1)DEYEDECPHLIALSSLNR 132.48 3.67E-12 39285800 6563.1 6175.6 6304.8 5503.8 7013.1 6662.4 6483.4 5739.7 4668.41 4520.01 TRUE FALSE 6004.873881 5773.567318 5876.847742 5927.70363 6733.753377 7039.61933 6050.904216 5689.518408 5153.707926 5079.982963 1.182065752 1.136532811 1.156863672 1.166874707 1.325546449 1.385756484 1.191126872 1.119987695 1.014512837 1 12.31060794 -8.015607761 2.288325332 1.004826109 1.22370911 0.575874176 0.073730632 0.267324613 2.587942407 0.070345421 0.023734943 9.65E-09 8.015607761 0.218883 VQGGVPAGS(ph)DEYEDECPHLIALSSLNR ddPTM_A459_MK2206_30min_R2 1 VQGGVPAGSDEYEDECPHLIALSSLNR 27 0 Q9BVS4-2;Q9BVS4;H0Y919;H0Y8R4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 VQGGVPAGS(0.833)DEY(0.167)EDECPHLIALSSLNR 72.082 0.0002771 3701700 21571 25334 22285 30960 25236 28138 28110 25504 24844 30070 TRUE FALSE 23222.49235 24075.9504 23027.97078 28430.46896 24245.10784 29208.81131 24419.12323 28837.46037 27004.88621 29088.81836 0.798330549 0.827670279 0.79164339 0.977367613 0.833485484 1.004125054 0.839467693 0.991358948 0.928359684 1 14.82817707 -1.522878765 0.188738514 1.000084446 0.026782443 0.472791952 0.061340528 45.81672852 0.53314147 0.11833127 12.9616713 0.029999999 1.522878765 -0.973302002 VQGLLENGDSVT(ph)SPEK ddPTM_A459_MK2206_30min_R1 2 VQGLLENGDSVTSPEK 16 0 P41229-4;P41229-3;P41229-2;P41229-5;P41229 P41229-4 KDM5C Lysine-specific demethylase 5C 1 VQGLLENGDSVT(0.5)S(0.5)PEK;VQGLLENGDSVT(0.5)S(0.5)PEK 249.54 5.41E-29 30458000 6939.5 8773.3 8323.7 6260.7 4656.1 4674 6941.7 5801.5 8897.7 10133.3 TRUE FALSE 6349.259084 8202.156575 7758.710435 6742.900199 4470.637678 4938.637841 6478.631859 5750.778097 9822.647756 11388.68971 0.55750567 0.720201954 0.681264538 0.592069884 0.392550661 0.433644077 0.568865429 0.504955201 0.862491473 1 13.47531415 -8.407797248 3.616976345 0.995215281 0.558227332 0.720168595 0.095027735 0.132556807 2.995263784 0.104395356 0.02766652 3.91E-09 8.407797248 -0.436987949 VQGLLENGDSVTS(ph)PEK ddPTM_A459_MK2206_30min_R2 4 VQGLLENGDSVTSPEK 16 0 P41229-4;P41229-3;P41229-2;P41229-5;P41229 P41229-4 KDM5C Lysine-specific demethylase 5C 1 VQGLLENGDSVT(0.03)S(0.97)PEK;VQGLLENGDSVT(0.019)S(0.981)PEK;VQGLLENGDSVT(0.095)S(0.905)PEK;VQGLLENGDSVT(0.081)S(0.919)PEK 254.72 5.74E-30 49986500 415874 315118 351822 282196 301731 220173 361273 274013 229180 381509 TRUE FALSE 447713.6332 299469.6983 363551.5699 259139.6841 289883.5249 228551.8378 313837.4211 309827.4399 249113.6621 369060.3926 1.213117534 0.811438194 0.985073384 0.702160647 0.785463655 0.619280319 0.85036874 0.839503361 0.674994302 1 18.49349739 -1.958778402 1.044898799 0.782259268 200 0.506057366 0.118448466 599.9194617 1.866312065 0.035351039 284874.1494 0.010995667 1.958778402 199.2177407 VQIPVSRPDPEPVS(ph)DNEEDSYDEEIHDPR ddPTM_A459_MK2206_30min_R1 2 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR 29 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 VQIPVSRPDPEPVS(0.457)DNEEDS(0.42)Y(0.123)DEEIHDPR;VQIPVSRPDPEPVS(0.552)DNEEDS(0.211)Y(0.236)DEEIHDPR 71.794 9.64E-05 33113000 3703.6 3501 3791 3243.4 4000.4 3359.5 3498.3 3194.3 2924.8 2611.03 TRUE FALSE 3388.589372 3273.084264 3533.677482 3493.20723 3841.055597 3549.711987 3264.93479 3166.372572 3228.843426 2934.504109 1.154740033 1.115379002 1.204182155 1.190390983 1.308928342 1.209646283 1.112601881 1.07901453 1.100302916 1 11.51890101 -7.451824793 3.039699099 1.06852638 1.19830322 0.587348307 0.052167363 0.219624552 3.966164721 0.028002253 0.016774331 3.53E-08 7.451824793 0.12977684 VQIPVSRPDPEPVS(ph)DNEEDSYDEEIHDPR ddPTM_A459_MK2206_30min_R2 3 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR 29 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 VQIPVS(0.003)RPDPEPVS(0.538)DNEEDS(0.219)Y(0.24)DEEIHDPR;VQIPVS(0.004)RPDPEPVS(0.423)DNEEDS(0.308)Y(0.265)DEEIHDPR;VQIPVSRPDPEPVS(0.648)DNEEDS(0.187)Y(0.164)DEEIHDPR 57.711 0.0022953 54185200 69286.1 81553.9 78203.2 95880 93144.9 97733 82202.4 78440.2 91255 77055.8 TRUE FALSE 74590.69709 77504.05192 80810.45566 88046.2973 89487.56321 101452.2978 71409.12614 88692.60347 99192.19495 74541.47556 1.000660324 1.039743999 1.084100564 1.181171913 1.200507 1.361018105 0.957978436 1.189842337 1.330698034 1 16.18575576 -5.545395244 2.214939417 1.183042 1.016972655 0.220475064 0.117822292 0.465233692 4.520068914 0.033961018 0.080952698 2.85E-06 5.545395244 -0.166069345 VQIPVSRPDPEPVSDNEEDS(ph)YDEEIHD ddPTM_A459_MK2206_30min_R1 1 VQIPVSRPDPEPVSDNEEDSYDEEIHD 27 1 H0YLT6 H0YLT6 TJP1 1 VQIPVSRPDPEPVS(0.35)DNEEDS(0.368)Y(0.282)DEEIHD 53.482 0.0071399 4580400 600.75 462.22 713 610.44 563.58 628.82 583.19 688.63 650.34 555.1 TRUE FALSE 549.6530578 432.129394 664.6035465 657.4561946 541.1314152 664.423245 544.2864592 682.6093805 717.9451703 623.8699788 0.881037839 0.692659382 1.065291758 1.053835281 0.867378514 1.065002753 0.872435728 1.094153275 1.150792945 1 9.285101577 -5.268388215 24.99816223 1.016409872 0.786848606 0.490001733 0.095501643 404.0896193 1453700.328 0.024839834 0.0535666 5.39E-06 5.268388215 -0.229561266 VQIPVSRPDPEPVSDNEEDS(ph)YDEEIHDPR ddPTM_A459_MK2206_30min_R2 1 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR 29 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 VQIPVS(0.003)RPDPEPVS(0.291)DNEEDS(0.375)Y(0.33)DEEIHDPR 54.855 0.0041009 11391000 21933 25630 21819 30641 27152 31643 26183 18537 28234 29792 TRUE FALSE 23612.20734 24357.25147 22546.43457 28137.53228 26085.87605 32847.19654 22745.14065 20959.84955 30689.74228 28819.88948 0.819302495 0.845154229 0.782322034 0.976323393 0.905134493 1.139740545 0.789216789 0.727270296 1.064880638 1 14.81477718 -5.75897026 24.99993212 0.932044193 0.818549041 0.200952671 0.115082102 122.4340075 1239617.257 0.032698574 0.053428627 1.74E-06 5.75897026 -0.113495152 VQIPVSRPDPEPVSDNEEDSY(ph)DEEIHDPR ddPTM_A459_MK2206_30min_R2 1 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR 29 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 VQIPVSRPDPEPVS(0.068)DNEEDS(0.442)Y(0.49)DEEIHDPR 53.705 0.020993 11521000 13599 19895 13919 18328 17599 19100 17073 16288 21133 18255 TRUE FALSE 14640.1499 18907.04323 14383.05251 16830.54377 16907.97483 19826.86388 14831.29459 18416.89753 22971.11014 17659.34085 0.829031504 1.070653961 0.814472785 0.953067497 0.957452205 1.12274088 0.839855503 1.042898355 1.300790915 1 14.10814387 -8.003477144 24.5065445 1.157545212 0.948677277 0.343193121 0.116095083 105.4386762 743113.7106 0.061363894 0.028459791 9.92E-09 8.003477144 -0.208867936 VQIS(ph)PDSGGLPER ddPTM_A459_MK2206_30min_R1 3 VQISPDSGGLPER 13 0 A0A087WTP3;Q92945;M0QXW7;M0QYH3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 1 VQIS(0.786)PDS(0.214)GGLPER;VQIS(0.801)PDS(0.199)GGLPER;VQIS(0.96)PDS(0.04)GGLPER 149.59 0.00051541 122304000 9203.3 8569.7 8958.3 7447.5 9245.7 7999.4 8861.7 8029.8 7622.8 7020 TRUE FALSE 8420.511007 8011.810972 8350.235555 8021.10774 8877.424191 8452.319115 8270.552162 7959.596305 8415.217338 7889.690598 1.067280257 1.015478474 1.058373006 1.016656818 1.125192944 1.071311861 1.048273321 1.008860386 1.066609296 1 12.94575301 -9.173850304 0.683183544 0.999390386 1.055233074 0.18820375 0.032739162 4.12639458 2.846596566 0.045373514 0.012731316 6.70E-10 9.173850304 0.055842688 VQIS(ph)PDSGGLPER ddPTM_A459_MK2206_30min_R2 2 VQISPDSGGLPER 13 0 A0A087WTP3;Q92945;M0QXW7;M0QYH3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 1 VQIS(0.652)PDS(0.348)GGLPER;VQIS(0.926)PDS(0.074)GGLPER 90.453 0.021104 11923900 140577 125816 143755 161632 144286 136394 154001 124817 143445 169412 TRUE FALSE 151339.6832 119568.1604 148547.72 148426.1486 138620.6067 141584.5692 133780.4837 141131.0105 155921.5868 163884.1003 0.923455557 0.729589754 0.906419352 0.905677538 0.845845365 0.863931089 0.816311549 0.861163531 0.951413752 1 17.32231637 -8.383213045 2.87066474 0.997944721 0.85357393 0.464912026 0.052343306 0.214007825 3.320687653 0.048443961 0.0131686 4.14E-09 8.383213045 -0.144370791 VQISPDS(ph)GGLPER ddPTM_A459_MK2206_30min_R2 1 VQISPDSGGLPER 13 0 A0A087WTP3;Q92945;M0QXW7;M0QYH3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 1 VQIS(0.142)PDS(0.858)GGLPER 102.15 0.0095328 74035000 49006 63727 65541 61187 64674 53584 64196 39014 53816 58681 TRUE FALSE 52757.93704 60562.40985 67726.10423 56187.82637 62134.5738 55623.17667 55766.98809 44113.26376 58496.8184 56766.24378 0.929389255 1.066873653 1.193070031 0.989810539 1.094569055 0.979863612 0.982397009 0.7771038 1.030485981 1 15.79274566 -7.075733025 2.288435979 0.926718582 1.059215725 0.225362484 0.091007318 0.394065519 4.075234345 0.039353289 0.029478594 8.40E-08 7.075733025 0.132497143 VQISSQNPPPS(ph)PMPGR ddPTM_A459_MK2206_30min_R1 1 VQISSQNPPPSPMPGR 16 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 VQISSQNPPPS(1)PMPGR 114.21 0.0021383 5928900 991.33 1311.1 1031.4 814 1469.2 1239.3 1367.6 1170.6 979.23 940.5 TRUE FALSE 907.0121778 1225.747152 961.3914416 876.694421 1410.678653 1309.468095 1276.369899 1160.365568 1081.024463 1057.01624 0.858087268 1.159629441 0.909533274 0.829404873 1.3345856 1.238834414 1.20752156 1.097774588 1.022713201 1 10.04578183 -6.253201928 24.99167111 1.162420934 0.952794811 0.402291947 0.125075368 670.1019206 2033026.031 0.038357647 0.048661848 5.58E-07 6.253201928 -0.209626123 VQISSQNPPPS(ph)PMPGR ddPTM_A459_MK2206_30min_R2 1 VQISSQNPPPSPMPGR 16 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 VQISSQNPPPS(1)PMPGR 130.09 0.00062175 0 3942.2 4575.6 5957.7 6175.4 5651.6 4071.8 6081.3 3983.1 4491.9 6536.5 TRUE FALSE 4244.017863 4348.382358 6156.326744 5670.850066 5429.689787 4226.755202 5282.818005 4503.704846 4882.597343 6323.21454 0.671180431 0.687685406 0.973607127 0.896830248 0.858691375 0.668450386 0.835463983 0.712249255 0.772170122 1 12.62644245 -11.69462911 2.125014613 1.486504299 0.790057722 0.295668903 0.098811659 11169792.09 2256770.448 26155564.57 0.027961479 2.02E-12 11.69462911 -0.696446577 VQMPS(ph)FK ddPTM_A459_MK2206_30min_R2 1 VQMPSFK 7 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 VQMPS(1)FK 79.489 0.046662 11251000 100400 166730 114260 124620 78804 90819 103190 90568 100120 94781 TRUE FALSE 108086.7012 158450.4306 118069.3714 114438.1474 75709.759 94275.18068 89641.02905 102405.5486 108828.2566 91688.30373 1.178849393 1.728142241 1.28772555 1.248121546 0.825729738 1.028213816 0.977671365 1.116887808 1.186937179 1 16.48445009 -5.846272054 2.4713986 1.028224163 1.450093552 0.527977714 0.159313784 0.203254721 2.524901702 0.046371701 0.079369064 1.42E-06 5.846272054 0.421869388 VQMPS(ph)LK ddPTM_A459_MK2206_30min_R2 2 VQMPSLK 7 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 VQMPS(1)LK;VQMPS(1)LK 95.502 0.023749 6523200 56695 69616 50752 48354 40262 36586 47682 38529 47217 32439 TRUE FALSE 61035.61279 66158.97067 52444.04635 44403.32352 38681.11158 37978.30587 41421.29612 43564.87259 51323.84931 31380.51809 1.945016096 2.108281657 1.671229462 1.414996508 1.232647322 1.210251079 1.319968523 1.388277672 1.635532249 1 14.93758155 -5.567185462 2.251277527 1.315871494 2.03163343 0.768162116 0.157702848 0.141557089 1.42887627 0.045716576 0.105305126 2.71E-06 5.567185462 0.715761935 VQMT(ph)SPSSTGSPMFK ddPTM_A459_MK2206_30min_R2 1 VQMTSPSSTGSPMFK 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 VQMT(0.702)S(0.277)PS(0.015)S(0.005)T(0.002)GSPMFK 107.69 0.0097693 20358000 144540 150120 114650 128070 117410 88532 96943 70140 73426 95830 TRUE FALSE 155606.0935 142665.2591 118472.3738 117606.2713 112799.8935 91901.1473 84214.26765 79307.53883 79812.46076 92703.07495 1.678542957 1.53894851 1.277976743 1.268633984 1.216786968 0.991349503 0.908430143 0.855500628 0.860947286 1 16.50032957 -5.518040923 0.512073719 0.86331842 1.892384137 0.932653394 0.07063861 0.54279409 0.185708084 0.052541847 0.309324269 3.03E-06 5.518040923 1.029065718 VQMTS(ph)PSSTGSPMFK ddPTM_A459_MK2206_30min_R1 1 VQMTSPSSTGSPMFK 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 VQMT(0.007)S(0.531)PS(0.098)S(0.177)T(0.177)GS(0.009)PMFK 112.5 0.0029928 29564000 4433.2 3847 3832.5 2612.2 2993.1 3089 2659.8 2350.8 2654.5 2141.3 TRUE FALSE 4056.13306 3596.559601 3572.360578 2813.392097 2873.878489 3263.896511 2482.369595 2330.247203 2930.444774 2406.58041 1.685434255 1.494468909 1.484413553 1.169041385 1.194175136 1.356238294 1.03149248 0.968281464 1.217679975 1 11.23276891 -1.522878749 0.272830837 1.00771654 6.114545156 0.788248436 0.104418444 22.80541258 0.319397859 0.122197609 55.0318812 0.03 1.522878749 5.106828616 VQMTSPS(ph)STGSPMFK ddPTM_A459_MK2206_30min_R2 1 VQMTSPSSTGSPMFK 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 VQMT(0.091)S(0.091)PS(0.807)S(0.008)T(0.002)GSPMFK 177.39 1.95E-05 22818000 134490 133130 99187 123410 90361 81692 80195 69778 68708 81903 TRUE FALSE 144786.6578 126518.9578 102493.8451 113327.0082 86812.97311 84800.8463 69665.30017 78898.22418 74684.09764 79230.51182 1.827410356 1.596846403 1.29361584 1.430345528 1.095701279 1.070305421 0.879273636 0.995806065 0.942617887 1 16.2737685 -4.92782381 0.481339095 0.922459189 2.354811249 0.924277188 0.082080439 1.030173811 0.204528008 0.056674276 0.827717714 1.18E-05 4.92782381 1.432352059 VQMTSPSS(ph)TGSPMFK ddPTM_A459_MK2206_30min_R1 1 VQMTSPSSTGSPMFK 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 VQMT(0.151)S(0.015)PS(0.015)S(0.495)T(0.302)GS(0.022)PMFK 83.856 0.022691 29125000 8530.2 7171.3 6768.8 5380.1 6451.4 5340.5 5218.3 4975.5 4765.8 4354.2 TRUE FALSE 7804.661696 6704.447067 6309.352715 5794.476234 6194.427077 5642.874495 4870.196728 4931.999728 5261.221965 4893.631169 1.59486104 1.370035222 1.289298784 1.184085199 1.265814048 1.153105802 0.995211237 1.007840509 1.075116163 1 12.25668965 -1.522878745 0.277542468 0.981857769 5.443741396 0.911315432 0.054394476 14.94979456 0.210290465 0.066240564 32.25020938 0.03 1.522878745 4.461883628 VQMTSPSSTGS(ph)PMFK ddPTM_A459_MK2206_30min_R2 2 VQMTSPSSTGSPMFK 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 VQMTSPS(0.004)S(0.004)T(0.002)GS(0.989)PMFK;VQMTSPSS(0.003)T(0.001)GS(0.996)PMFK 164.58 9.34E-05 13776600 62194 59397 45243 53169 56065 50695 58355 46427 43269 61953 TRUE FALSE 66955.62046 56447.43135 46751.37904 48824.92262 53863.6064 52624.23375 50692.9184 52495.16831 47032.45941 59931.47868 1.117202878 0.941866154 0.78008052 0.814679092 0.898753169 0.878073341 0.84584795 0.875919791 0.784770549 1 15.87102635 -4.852028001 3.207895862 0.855282687 1.135354994 0.62314786 0.060606187 0.174829793 2.943046101 0.014674756 0.112238954 1.41E-05 4.852028001 0.280072306 VQNHLPASGPTQPPVVSSTNEGS(ph)PSPPEPTGK ddPTM_A459_MK2206_30min_R1 1 VQNHLPASGPTQPPVVSSTNEGSPSPPEPTGK 32 0 O43294-2;O43294;H3BQC4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 VQNHLPASGPTQPPVVS(0.015)S(0.089)T(0.266)NEGS(0.561)PS(0.068)PPEPT(0.001)GK 115.5 1.31E-16 8222000 1315.8 1291.1 1323.5 1059 1402.9 1262.4 1364.1 1396.5 1172.7 1230.8 TRUE FALSE 1203.8843 1207.049155 1233.664507 1140.564363 1347.019522 1333.875997 1273.103378 1384.290548 1294.606362 1383.280796 0.870310861 0.872598795 0.891839539 0.824535674 0.973786035 0.964284331 0.920350649 1.000729969 0.935895565 1 10.43387833 -6.273680893 24.95430748 0.963525234 0.867306638 0.755306365 0.028135667 358.5221204 730845.2811 0.008311374 0.009491706 5.32E-07 6.273680893 -0.096218596 VQNHLPASGPTQPPVVSSTNEGS(ph)PSPPEPTGK ddPTM_A459_MK2206_30min_R2 2 VQNHLPASGPTQPPVVSSTNEGSPSPPEPTGK 32 0 O43294-2;O43294;H3BQC4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 VQNHLPASGPTQPPVVS(0.065)S(0.065)T(0.065)NEGS(0.574)PS(0.23)PPEPT(0.002)GK;VQNHLPASGPTQPPVVS(0.173)S(0.173)T(0.173)NEGS(0.476)PS(0.005)PPEPTGK 125.12 7.09E-19 56138000 144610 169937 149025 173265 181663 139315 181970 137330 146598 164662 TRUE FALSE 155681.4528 161498.1757 153993.4191 159108.6953 174529.9978 144616.7299 158077.1204 155279.5025 159348.8291 159289.0924 0.977351622 1.01386839 0.966754326 0.998867486 1.095680785 0.907888467 0.992391368 0.974828221 1.00037502 1 17.28128795 VQNHLPASGPTQPPVVSSTNEGSPS(ph)PPEPTGK ddPTM_A459_MK2206_30min_R2 2 VQNHLPASGPTQPPVVSSTNEGSPSPPEPTGK 32 0 O43294-2;O43294;H3BQC4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 VQNHLPASGPTQPPVVS(0.001)S(0.006)T(0.015)NEGS(0.036)PS(0.935)PPEPT(0.007)GK;VQNHLPASGPTQPPVVSSTNEGS(0.004)PS(0.986)PPEPT(0.009)GK 126.74 6.80E-19 13292100 50496 63897 59313 64758 74572 58920 71882 53720 59618 59585 TRUE FALSE 54362.01258 60723.96789 61290.46582 59467.06425 71643.92859 61162.24189 62443.80705 60741.38845 64803.46588 57640.74633 0.943117778 1.053490313 1.063318394 1.031684495 1.242938948 1.061093858 1.083327525 1.053792539 1.124264865 1 15.8148014 -3.891396751 1.052047914 1.090771134 0.264197778 0.311632833 0.062071917 11.54204606 2.583911176 0.019090993 16.69490431 0.000128411 3.891396751 -0.826573356 VQNS(ph)PPVGR ddPTM_A459_MK2206_30min_R1 3 VQNSPPVGR 9 0 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y8P9;H0YA73 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 VQNS(1)PPVGR;VQNS(1)PPVGR;VQNS(1)PPVGR 111.5 0.010239 225825000 18305.8 18142.4 17236 14804.2 18219.3 15890.9 19073 16713.8 15730.8 14447.7 TRUE FALSE 16748.79558 16961.32646 16066.06834 15944.42205 17493.5867 16790.62903 17800.67497 16567.67301 17366.07295 16237.59015 1.031482839 1.044571658 0.989436745 0.981945098 1.077351167 1.034059172 1.09626335 1.020328316 1.06949817 1 13.98704992 -6.266260946 24.99951854 1.052157567 1.012594102 0.256148931 0.031299798 556.0373507 2883014.127 0.009420475 0.01102871 5.42E-07 6.266260946 -0.039563466 VQNS(ph)PPVGR ddPTM_A459_MK2206_30min_R2 1 VQNSPPVGR 9 0 E7EMZ9;E9PBC6;O95359-5;O95359-3;O95359;E9PGB3;D6RAA5;Q4VXL8;O95359-6;O95359-1;H0Y8P9;H0YA73 E7EMZ9 TACC2 Transforming acidic coiled-coil-containing protein 2 1 VQNS(1)PPVGR 91.469 0.027177 7859000 27739 30703 32859 32048 28216 31109 29856 26630 23702 29217 TRUE FALSE 29862.71917 29178.33367 33954.50266 29429.57588 27108.09807 32292.87479 25935.87134 30110.63243 25763.55712 28263.65168 1.056576818 1.032362484 1.201348751 1.041251718 0.959115205 1.142558476 0.917640496 1.06534827 0.911543823 1 14.78666025 -6.992486499 0.794274319 0.974715943 1.083690476 0.223637295 0.077127473 1.021726638 1.347833741 0.056319545 0.043067827 1.02E-07 6.992486499 0.108974533 VQPNEAVY(ph)TK ddPTM_A459_MK2206_30min_R2 1 VQPNEAVYTK 10 0 P11413-3;P11413;P11413-2 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 1 VQPNEAVY(0.98)T(0.02)K 159.83 0.0063234 16417000 56584 65867 67129 58114 56785 46808 74030 44983 53999 63925 TRUE FALSE 60916.11455 62596.14056 69367.04736 53365.9003 54555.33558 48589.31124 64309.77207 50862.43255 58695.73541 61839.13249 0.985073886 1.01224157 1.121733837 0.862979446 0.882213792 0.785737272 1.039952688 0.822495894 0.949168157 1 15.91623246 -5.774417587 24.99936847 0.898251713 1.036938957 0.368688249 0.079633102 217.8959503 419723.4398 0.021587784 0.032249017 1.68E-06 5.774417587 0.138687244 VQPNEAVYT(ph)K ddPTM_A459_MK2206_30min_R1 1 VQPNEAVYTK 10 0 P11413-3;P11413;P11413-2 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 1 VQPNEAVY(0.437)T(0.563)K 101.97 0.036914 5418700 1984.6 1656 2357.8 1632.1 1728.9 1530.1 1667.3 1997.8 1634 1382.1 TRUE FALSE 1815.799348 1548.194099 2197.759105 1757.804625 1660.034252 1616.73294 1556.077459 1980.333445 1803.860147 1553.324982 1.168975822 0.996696838 1.414873983 1.131639963 1.068697324 1.040820793 1.00177199 1.27489963 1.1612896 1 10.60114398 -5.990209682 24.99967489 1.09819396 1.190404188 0.12333377 0.121109594 511.8015707 1306876.434 0.035062317 0.051938489 1.02E-06 5.990209682 0.092210228 VQPNEAVYT(ph)K ddPTM_A459_MK2206_30min_R2 1 VQPNEAVYTK 10 0 P11413-3;P11413;P11413-2 P11413-3 G6PD Glucose-6-phosphate 1-dehydrogenase 1 VQPNEAVY(0.018)T(0.982)K 104.94 0.029975 5166900 13409 18059 17115 19342 15721 12879 18060 11211 14200 18759 TRUE FALSE 14435.60335 17162.21632 17685.60556 17761.69673 15103.71455 13369.11937 15688.70031 12676.31619 15435.09033 18146.89537 0.795486118 0.945738429 0.974580235 0.978773304 0.83230295 0.736716617 0.864539084 0.698539113 0.850563693 1 14.14743513 -6.39057856 5.939773527 0.810545038 0.928306219 0.187893332 0.090070736 0.307102084 13.56150773 0.02711708 0.030742099 4.07E-07 6.39057856 0.117761181 VQPQWS(ph)PPAGTQPCR ddPTM_A459_MK2206_30min_R1 4 VQPQWSPPAGTQPCR 15 0 P49589-3;B4DKY1;P49589-2;P49589;E9PLP0;C9JLN0;E9PRS8 P49589-3 CARS "Cysteine--tRNA ligase, cytoplasmic" 1 VQPQWS(0.998)PPAGT(0.002)QPCR;VQPQWS(0.995)PPAGT(0.005)QPCR;VQPQWS(0.993)PPAGT(0.007)QPCR;VQPQWS(0.98)PPAGT(0.02)QPCR 133.23 0.00076909 25505600 3928.71 3364.83 3858.32 3045.17 3328.85 3762.39 3388.95 3987.73 3831.46 3395.09 TRUE FALSE 3594.552584 3145.778955 3596.427988 3279.709521 3196.254856 3975.41327 3162.879329 3952.865697 4229.753978 3815.699381 0.942042919 0.824430502 0.942534416 0.859530375 0.837658981 1.041857042 0.828912085 1.035947883 1.108513422 1 11.8977318 -7.863483068 6.515463378 1.059170338 0.897861813 0.511445133 0.067835166 0.162521766 8.935788997 0.035831958 0.017037635 1.37E-08 7.863483068 -0.161308525 VQPQWS(ph)PPAGTQPCR ddPTM_A459_MK2206_30min_R2 4 VQPQWSPPAGTQPCR 15 0 P49589-3;B4DKY1;P49589-2;P49589;E9PLP0;C9JLN0;E9PRS8 P49589-3 CARS "Cysteine--tRNA ligase, cytoplasmic" 1 VQPQWS(0.995)PPAGT(0.005)QPCR;VQPQWS(0.994)PPAGT(0.006)QPCR;VQPQWS(1)PPAGTQPCR;VQPQWS(0.987)PPAGT(0.013)QPCR 160.93 0.00012473 78203000 62345.3 78561.6 75600.5 85353 76080 80892.6 79960 64277.1 63619 77700 TRUE FALSE 67118.5041 74660.34518 78120.98294 78379.38687 73092.71693 83971.02458 69461.15595 72678.33767 69152.46562 75164.65536 0.892952995 0.993290594 1.039331353 1.042769191 0.972434671 1.11716104 0.924119929 0.966921718 0.920013074 1 16.1977668 -10.13630198 5.065582931 1 0.990088594 0 0.063956147 87726499.43 40.88278097 0.969257247 0.015639284 7.31E-11 10.13630198 -0.009911406 VQQEIDS(ph)DESPVAR ddPTM_A459_MK2206_30min_R2 4 VQQEIDSDESPVAR 14 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 VQQEIDS(0.956)DES(0.044)PVAR;VQQEIDS(0.949)DES(0.051)PVAR;VQQEIDS(0.996)DES(0.004)PVAR;VQQEIDS(0.954)DES(0.046)PVAR 186.42 8.13E-15 21279700 42916.1 50914.2 51219.1 58842.2 55327.6 54134.8 55884 37055.5 55847.6 51561.1 TRUE FALSE 46201.78961 48385.87486 52926.71923 54034.60403 53155.16043 56194.93775 48546.36367 41898.78108 60705.1233 49878.66553 0.926283595 0.97007156 1.061109367 1.083320964 1.065689305 1.126632743 0.973289144 0.840014075 1.217055883 1 15.60613525 -5.077124549 3.599758954 1.042299341 0.932303002 0.15378795 0.093738561 0.453312398 10.927178 0.024406587 0.086431477 8.37E-06 5.077124549 -0.109996338 VQQSSESSTSS(ph)PSQHEATPGAR ddPTM_A459_MK2206_30min_R1 2 VQQSSESSTSSPSQHEATPGAR 22 0 O75152;E9PBY7;E9PQ61;A0A1B0GTU1;A0A494C0C4 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 VQQSSESSTS(0.021)S(0.979)PSQHEATPGAR;VQQSSESSTS(0.009)S(0.982)PS(0.009)QHEATPGAR 222.17 1.76E-26 29346000 904.4 302.41 568 396.68 1254.58 1119.77 966.27 671.12 352.93 386.34 TRUE FALSE 827.4760308 282.723054 529.4457425 427.2323623 1204.607422 1183.17041 901.8118914 665.2524686 389.6183365 434.2027159 1.905736654 0.651131473 1.219351522 0.983946776 2.774297299 2.724926322 2.076937473 1.532124154 0.897318976 1 8.76222494 -6.210404231 24.99923684 1.917541782 1.153641268 0.181031979 0.655276286 561.2508255 274924.6443 0.20340995 0.262600835 6.16E-07 6.210404231 -0.763900514 VQQVGHY(ph)PPANS(ph)S(ph)LS(ph)SR ddPTM_A459_MK2206_30min_R1 1 VQQVGHYPPANSSLSSR 17 0 Q24JP5;Q24JP5-2;Q24JP5-3 Q24JP5 TMEM132A Transmembrane protein 132A 4 VQQVGHY(1)PPANS(1)S(1)LS(0.644)S(0.356)R 55.975 0.043188 5777400 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 VQRPEDASGGSS(ph)PSGTSK ddPTM_A459_MK2206_30min_R1 3 VQRPEDASGGSSPSGTSK 18 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2;H0YJN0;Q9UI08-5;G3V314;H0YJL6 Q9UI08-4 EVL Ena/VASP-like protein 1 VQRPEDASGGS(0.007)S(0.954)PS(0.039)GTSK;VQRPEDAS(0.004)GGS(0.19)S(0.794)PS(0.009)GT(0.002)S(0.001)K;VQRPEDAS(0.027)GGS(0.107)S(0.866)PS(0.001)GTSK 181.86 4.83E-09 11462300 3154.51 3493.26 3179.87 2924.06 3693.02 2487.13 2777.64 2921.78 2305.41 2207.32 TRUE FALSE 2886.20236 3265.848139 2964.029284 3149.271608 3545.919193 2627.949151 2592.348704 2896.235186 2545.065619 2480.779466 1.163425608 1.316460485 1.194797573 1.269468589 1.429356878 1.059323969 1.044973461 1.167469832 1.025913691 1 11.27657777 -6.7933394 24.99184545 1.069092728 1.272291917 0.652138156 0.078408531 128.8548761 100949.5709 0.027252558 0.024036487 1.61E-07 6.7933394 0.203199189 VQRPEDASGGSS(ph)PSGTSK ddPTM_A459_MK2206_30min_R2 2 VQRPEDASGGSSPSGTSK 18 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2;H0YJN0;Q9UI08-5;G3V314;H0YJL6 Q9UI08-4 EVL Ena/VASP-like protein 1 VQRPEDASGGS(0.088)S(0.873)PS(0.034)GT(0.004)S(0.001)K;VQRPEDAS(0.026)GGS(0.005)S(0.969)PSGTSK 208.4 7.46E-11 7254200 38293 35785.3 32608 37477 35730 26953.6 44449 27685.8 24710.7 30003.3 TRUE FALSE 41224.74152 34008.25404 33695.13445 34415.00922 34327.06067 27979.33814 38612.79291 31304.42912 26859.99202 29024.29478 1.420352909 1.171716808 1.160928619 1.185731108 1.182700938 0.963997174 1.330361106 1.078559509 0.92543134 1 14.82497339 -1.522878745 0.222252799 1.01151548 2.735524911 0.448904441 0.110246124 53.91948918 0.693182396 0.172019551 33.44682391 0.03 1.522878745 1.72400943 VQRPHS(ph)SPPR ddPTM_A459_MK2206_30min_R1 1 VQRPHSSPPR 10 1 R4GNF5;E9PP52;E9PMB0;E9PJ55;Q9NUJ3 R4GNF5 TCP11L1 T-complex protein 11-like protein 1 1 VQRPHS(0.596)S(0.404)PPR 79.283 0.027737 15070000 724.16 685.23 817.78 681.72 1221.2 908.15 1182.6 912.39 643.34 861.13 TRUE FALSE 662.5663893 640.6214025 762.2713721 734.2261925 1172.557018 959.5686682 1103.710912 904.4130704 710.2174952 967.8132856 0.684601461 0.661926646 0.787622348 0.758644465 1.211552926 0.99148119 1.140417194 0.934491274 0.733837307 1 9.918584934 -6.101369529 7.481230775 1.004846402 0.717204507 0.558012461 0.122010425 0.214020289 13.91787199 0.037616108 0.048766754 7.92E-07 6.101369529 -0.287641896 VQRPHS(ph)SPPR ddPTM_A459_MK2206_30min_R2 1 VQRPHSSPPR 10 1 R4GNF5;E9PP52;E9PMB0;E9PJ55;Q9NUJ3 R4GNF5 TCP11L1 T-complex protein 11-like protein 1 1 VQRPHS(0.5)S(0.5)PPR 74.237 0.034609 49244000 15917 17638 16654 21776 21137 19963 16746 14846 20043 18418 TRUE FALSE 17135.61776 16762.12257 17209.23605 19996.83114 20307.05518 20722.70595 14547.23008 16786.42317 21786.30391 17817.02217 0.961755427 0.940792598 0.965887334 1.12234418 1.139755846 1.163084704 0.816479317 0.942156496 1.222780311 1 14.12096861 -5.623564677 8.077841757 1.053248964 0.951855472 0.148905166 0.111594201 0.513867247 36.42582783 0.032377421 0.056225845 2.38E-06 5.623564677 -0.101393492 VQRPHSS(ph)PPR ddPTM_A459_MK2206_30min_R2 1 VQRPHSSPPR 10 1 R4GNF5;E9PP52;E9PMB0;E9PJ55;Q9NUJ3 R4GNF5 TCP11L1 T-complex protein 11-like protein 1 1 VQRPHS(0.236)S(0.764)PPR 77.387 0.030319 9855000 6888.3 7664.7 5985.3 6534.3 6954.5 7608.2 6267.2 5777.2 5710.5 6658.3 TRUE FALSE 7415.673544 7284.082144 6184.846915 6000.426788 6681.431386 7897.735382 5444.309112 6532.299876 6207.188968 6441.040216 1.151316138 1.13088599 0.960224856 0.931592815 1.037321793 1.226158371 0.845253085 1.014168466 0.963693559 1 12.65307798 -5.218853867 8.032300714 0.999662981 1.142069479 0.281240786 0.091900275 0.429243802 73.28845612 0.02392759 0.063209313 6.04E-06 5.218853867 0.142406498 VQS(ph)LAQNPR ddPTM_A459_MK2206_30min_R2 1 VQSLAQNPR 9 0 Q96RY5 Q96RY5 CRAMP1L Protein cramped-like 1 VQS(1)LAQNPR 84.687 0.036166 19247000 4245.4 26661 11285 37077 24040 48555 13325 11978 29327 12021 TRUE FALSE 4570.431088 25337.05351 11661.23627 34047.6905 23096.06881 50402.79455 11575.41149 13543.56573 31877.80945 11628.75575 0.393028385 2.178827558 1.00279312 2.927887662 1.986116941 4.334323948 0.995412728 1.164661638 2.741291512 1 13.50540912 -3.235012551 12.42079336 1.93786915 1.347544632 0 1.142610223 0 0 0.256889874 0 0.000582086 3.235012551 -0.590324518 VQS(ph)LPSVPLSCAAYR ddPTM_A459_MK2206_30min_R1 1 VQSLPSVPLSCAAYR 15 0 Q96AD5-2;Q96AD5 Q96AD5-2 PNPLA2 Patatin-like phospholipase domain-containing protein 2 1 VQS(0.958)LPS(0.038)VPLS(0.004)CAAYR 129.29 0.000896 20404000 1338.3 1339.9 1845.2 1303.4 1319.8 1314.8 1544.8 1633.5 1476.2 1563.5 TRUE FALSE 1224.470557 1252.672266 1719.952965 1403.788094 1267.229571 1389.24284 1441.749211 1619.218482 1629.656273 1757.198184 0.696831222 0.71288047 0.978804201 0.798878639 0.721164854 0.790601113 0.820481847 0.921477439 0.927417458 1 10.7790612 -7.89121507 1.466766583 0.978073179 0.785656191 0.501373357 0.075506485 0.393265278 1.536787387 0.068913073 0.024518898 1.28E-08 7.89121507 -0.192416988 VQS(ph)LPSVPLSCAAYR ddPTM_A459_MK2206_30min_R2 3 VQSLPSVPLSCAAYR 15 0 Q96AD5-2;Q96AD5 Q96AD5-2 PNPLA2 Patatin-like phospholipase domain-containing protein 2 1 VQS(0.862)LPS(0.138)VPLSCAAYR;VQS(0.987)LPS(0.013)VPLSCAAYR;VQS(0.999)LPS(0.001)VPLSCAAYR 204.9 4.95E-06 48434300 101228 91795 104632 102353 84620 93747 104783 72022 89217 96263 TRUE FALSE 108978.0935 87236.59378 108120.3787 93990.43249 81297.39362 97314.60778 91024.86623 81435.52269 96976.93339 93121.94619 1.170272937 0.936799512 1.161062275 1.009326333 0.873020775 1.045023346 0.977480282 0.874504089 1.041397193 1 16.50683359 -5.99319987 24.97622778 0.964255992 1.075966049 0.302478444 0.081122375 210.7532367 774065.7908 0.021552808 0.031886617 1.02E-06 5.99319987 0.111710057 VQS(ph)PEPPAPER ddPTM_A459_MK2206_30min_R1 2 VQSPEPPAPER 11 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 VQS(1)PEPPAPER;VQS(1)PEPPAPER 117.03 0.0057169 36034000 5881.8 5879.4 5966.7 5391.8 6007.4 6097.6 7113.2 5680 5914.8 5922.4 TRUE FALSE 5381.522023 5496.649991 5561.697028 5807.07737 5768.112537 6442.840843 6638.691407 5630.340359 6529.664626 6656.111624 0.80850838 0.82580496 0.835577488 0.872442906 0.866588913 0.967958653 0.997382824 0.845890315 0.981002873 1 12.70046391 -6.37282992 1.373882857 0.951278107 0.823487254 0.634155115 0.044237968 0.295561851 1.133160464 0.017831803 0.022655531 4.24E-07 6.37282992 -0.127790853 VQS(ph)PEPPAPER ddPTM_A459_MK2206_30min_R2 3 VQSPEPPAPER 11 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 VQS(1)PEPPAPER;VQS(1)PEPPAPER;VQS(1)PEPPAPER 153.81 0.00055408 67954000 113628 115728 102899 142695 132007 146360 137037 103216 143663 126396 TRUE FALSE 122327.447 109981.1158 106329.6013 131036.362 126823.7419 151929.8324 119043.8773 116706.6856 156158.5481 122271.7089 1.000455855 0.899481301 0.869617365 1.071681775 1.037228833 1.242559164 0.973601158 0.954486419 1.277143744 1 16.89973111 -5.775383084 23.97254732 1.078249181 0.920814513 0.317869691 0.104925204 162.2079796 278873.9869 0.029226155 0.043629579 1.68E-06 5.775383084 -0.157434668 VQS(ph)TITSRMATTMIQSK ddPTM_A459_MK2206_30min_R1 1 VQSTITSRMATTMIQSK 17 1 Q5T987;Q5T985;P19823 Q5T987 ITIH2 Inter-alpha-trypsin inhibitor heavy chain H2 1 VQS(0.5)T(0.5)ITSRMATTMIQSK 70.529 0.023772 58218000 8737.5 4062.2 4548.1 7381.1 6440.4 8666.8 6801.4 5233.7 4078.7 2869.2 TRUE FALSE 7994.329743 3797.750042 4239.387644 7949.593601 6183.86523 9157.506726 6347.691016 5187.942313 4502.695461 3224.658157 2.479124717 1.177721748 1.314678157 2.465251575 1.917680861 2.839837986 1.968484939 1.608834816 1.396332647 1 11.65493051 -8.236024496 1.750721413 1.05486227 2.001507953 0.32679178 0.484487365 0.460626552 2.605178531 0.479255537 0.143674687 5.81E-09 8.236024496 0.946645682 VQSLEGEKLS(ph)PK ddPTM_A459_MK2206_30min_R1 1 VQSLEGEKLSPK 12 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VQSLEGEKLS(1)PK 187.08 0.00054374 447720000 3535.9 4207.5 4448.7 3885.1 2309.7 1621.6 2195.5 2367.1 3656.1 3545.5 TRUE FALSE 3235.153137 3933.590985 4146.734639 4184.331075 2217.699758 1713.413591 2049.042201 2346.404694 4036.164678 3984.743307 0.811884954 0.987162957 1.04065289 1.050087986 0.556547709 0.429993467 0.514221882 0.588847139 1.012904563 1 11.96027108 -6.260016526 24.99700885 0.642030334 0.978370166 0.336260421 0.193374661 132.4641725 2327156.444 0.059334993 0.072483712 5.50E-07 6.260016526 0.336339832 VQSLPS(ph)VPLSCAAYR ddPTM_A459_MK2206_30min_R2 1 VQSLPSVPLSCAAYR 15 0 Q96AD5-2;Q96AD5 Q96AD5-2 PNPLA2 Patatin-like phospholipase domain-containing protein 2 1 VQS(0.245)LPS(0.552)VPLS(0.203)CAAYR 145.94 0.00035319 7815400 23130 25914 24636 19525 20502 22146 23672 20281 18258 23583 TRUE FALSE 24900.85058 24627.14844 25457.35194 17929.74504 19696.98847 22988.78155 20563.83796 22931.79634 19846.04784 22813.48864 1.091496832 1.07949945 1.115890355 0.785927366 0.863392214 1.00768374 0.901389449 1.005185866 0.86992604 1 14.47759946 -5.734859313 24.99979819 0.919923526 1.094016064 0.586868286 0.067877387 159.2570063 149787.4533 0.018598822 0.032202314 1.84E-06 5.734859313 0.174092538 VQSPS(ph)QTR ddPTM_A459_MK2206_30min_R1 1 VQSPSQTR 8 0 Q12830-4;Q12830;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-2;F5GXF5;J3KSK9 Q12830-4 BPTF Nucleosome-remodeling factor subunit BPTF 1 VQS(0.302)PS(0.696)QT(0.002)R 82.831 0.040368 6744800 5196.6 5062.1 3232.2 3640.9 2466.8 2742.9 4616.6 4223.8 610.8 2432.6 TRUE FALSE 4754.601882 4732.55637 3012.807269 3921.322749 2368.542132 2898.200628 4308.635037 4186.871762 674.2948458 2733.968853 1.739084144 1.731020587 1.101990341 1.43429679 0.866338375 1.060070829 1.575963469 1.531426284 0.246635892 1 11.41678109 -1.522878752 0.399831315 1.045376869 13.87004723 0.313270069 0.366865642 97.14100931 1.288898392 0.267834805 981.2153904 0.03 1.522878752 12.82467036 VQSWS(ph)PPVR ddPTM_A459_MK2206_30min_R2 1 VQSWSPPVR 9 0 Q7Z6J0;Q7Z6J0-3 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 1 VQS(0.026)WS(0.974)PPVR 92.611 0.025664 3705600 18044 19814 18763 20708 18563 16209 19964 14354 16125 18960 TRUE FALSE 19425.46251 18830.06557 19388.54906 19016.09016 17834.12335 16825.84485 17342.70282 16230.11708 17527.52335 18341.33675 1.059108329 1.026646303 1.057095746 1.036788671 0.972345887 0.917372876 0.945552827 0.884892814 0.955629548 1 14.16281117 -6.378576561 2.697890696 0.933986845 1.046006215 0.740239026 0.029056447 0.128451846 1.81612637 0.009216421 0.010743351 4.18E-07 6.378576561 0.112019371 VQT(ph)PEVDVK ddPTM_A459_MK2206_30min_R1 3 VQTPEVDVK 9 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VQT(1)PEVDVK;VQT(1)PEVDVK;VQT(1)PEVDVK 122.55 0.013821 23972000 18201.6 18248.8 16679 16559.4 13621.4 11310.4 15571.3 15677.7 14584.9 14338.6 TRUE FALSE 16653.45834 17060.7998 15546.87595 17834.80786 13078.83079 11950.78507 14532.56699 15540.63152 16101.05255 16114.97402 1.033415153 1.058692356 0.964747193 1.106722719 0.811594904 0.741595057 0.901805176 0.964359701 0.999136116 1 13.97611424 -6.258633127 24.99982475 0.89316164 1.036726557 0.397852788 0.082455095 273.6152709 2437531.85 0.026818428 0.033073112 5.51E-07 6.258633127 0.143564918 VQT(ph)PEVDVK ddPTM_A459_MK2206_30min_R2 1 VQTPEVDVK 9 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VQT(1)PEVDVK 118.61 0.016746 11622000 155690 142800 136510 119510 140600 99039 167680 108440 110530 196100 TRUE FALSE 167609.7461 135708.7597 141061.1753 109745.6507 135079.3375 102807.9985 145663.4146 122613.4803 120143.6996 189701.2731 0.883545711 0.715381386 0.743596355 0.578518262 0.712063421 0.541946803 0.767856811 0.646350329 0.633331014 1 17.53336983 -12.45893856 15.7747167 0.99221394 0.704821516 0 0.132560938 0 0 0 0.028418912 3.48E-13 12.45893856 -0.287392423 VQT(ph)TPPPAVQGQK ddPTM_A459_MK2206_30min_R1 3 VQTTPPPAVQGQK 13 0 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 1 VQT(0.5)T(0.5)PPPAVQGQK;VQT(0.686)T(0.314)PPPAVQGQK;VQT(0.953)T(0.047)PPPAVQGQK 141.34 0.0019496 137849000 8581 8938.1 8725.4 7545 8297.9 7549.7 8889.5 8023.5 6692 6805.6 TRUE FALSE 7851.140889 8356.228065 8133.144158 8126.117207 7967.377072 7977.15749 8296.497675 7953.351385 7387.657348 7648.729108 1.026463453 1.092498891 1.06333275 1.062414042 1.04166025 1.042938948 1.084689699 1.039826522 0.965867302 1 12.90100434 -8.121466372 4.586986826 0.984147554 1.059590829 0.687766788 0.020187023 0.121023189 3.875733218 0.01421826 0.005049363 7.56E-09 8.121466372 0.075443275 VQT(ph)TPPPAVQGQK ddPTM_A459_MK2206_30min_R2 1 VQTTPPPAVQGQK 13 0 Q2M2I8-2;Q2M2I8;E9PG46 Q2M2I8-2 AAK1 AP2-associated protein kinase 1 1 VQT(0.949)T(0.051)PPPAVQGQK 107.09 0.015752 13285000 111160 109090 100510 110370 112690 90468 123170 93850 102510 109880 TRUE FALSE 119670.4951 103672.7492 103860.9532 101352.4179 108265.2244 93910.82313 106997.631 106116.5172 111426.1345 106294.6246 1.125837694 0.975333886 0.977104474 0.953504642 1.018539035 0.883495506 1.006613754 0.998324399 1.048276288 1 16.69770911 -11.05885263 13.5620364 1.000000003 0.99335308 0 0.059706714 5.97E-09 2.50E-10 0.056797626 0.013775441 8.73E-12 11.05885263 -0.006646923 VQTTPS(ph)KPGGDR ddPTM_A459_MK2206_30min_R1 2 VQTTPSKPGGDR 12 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 VQT(0.006)T(0.02)PS(0.974)KPGGDR;VQTT(0.002)PS(0.998)KPGGDR 115.12 0.0029342 119219000 14225.4 14830.8 14810.4 12544.7 13518.3 12234.2 14147.6 13861.8 11872 11720.9 TRUE FALSE 13015.45503 13865.31222 13805.11131 13510.89497 12979.83749 12926.88983 13203.83942 13740.60774 13106.13688 13172.97358 0.988042294 1.052557506 1.047987474 1.025652628 0.985338459 0.981319043 1.002343118 1.043090815 0.994926226 1 13.68529343 -6.082702828 6.773622701 1.002499322 1.032638425 0.258588061 0.022532263 0.347565476 24.073273 0.0069531 0.00904942 8.27E-07 6.082702828 0.030139103 VQTTPS(ph)KPGGDR ddPTM_A459_MK2206_30min_R2 2 VQTTPSKPGGDR 12 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 VQT(0.008)T(0.163)PS(0.829)KPGGDR;VQT(0.025)T(0.14)PS(0.834)KPGGDR 77.204 0.02546 316142000 85755 119851 109769 120091 122790 96558 125414 96292 95652 106590 TRUE FALSE 92320.46873 113899.3736 113428.6437 110279.1811 117968.6476 100232.5824 108946.9912 108877.695 103971.6381 103111.977 0.895341854 1.104618269 1.100053039 1.069508939 1.14408288 0.972075071 1.056589101 1.055917054 1.00833716 1 16.65385239 -8.312115587 0.955160031 0.998014981 1.057886472 0.054065755 0.067490085 1.556716501 3.023254533 0.063228357 0.022137655 4.87E-09 8.312115587 0.059871491 VQVFGLYS(ph)GEEFHETFDCPIK ddPTM_A459_MK2206_30min_R1 1 VQVFGLYSGEEFHETFDCPIK 21 0 C9JZ11;C9JU58;C9J3F8;H7BXH3;P49754-2;P49754 C9JZ11 VPS41 Vacuolar protein sorting-associated protein 41 homolog 1 VQVFGLY(0.183)S(0.817)GEEFHETFDCPIK 52.644 0.029772 14586000 1992.2 2524.2 2079.1 1704.8 1808.2 1669.1 2066.8 1874 1892.5 1816.8 TRUE FALSE 1822.752929 2359.874121 1937.976485 1836.103991 1736.175565 1763.603 1928.927543 1857.615816 2089.232147 2041.8789 0.892684149 1.155736572 0.949114311 0.899222765 0.850283317 0.863715767 0.944682637 0.909758074 1.023191016 1 10.99568159 -5.505088979 24.35291136 0.918820665 1.031264147 0.18677249 0.078134514 673.1451398 921484.9216 0.019756069 0.039783937 3.13E-06 5.505088979 0.112443482 VRAS(ph)LSDLSSLDDVEGMSVR ddPTM_A459_MK2206_30min_R1 3 VRASLSDLSSLDDVEGMSVR 20 1 H7BYJ1;A0A087WTM5;Q969K3;Q969K3-2 H7BYJ1 RNF34 E3 ubiquitin-protein ligase RNF34 1 VRAS(0.987)LS(0.013)DLSSLDDVEGMSVR;VRAS(0.859)LS(0.14)DLS(0.001)SLDDVEGMSVR;VRAS(0.997)LS(0.003)DLSSLDDVEGMSVR 103.73 0.00031068 6569700 1875.41 1896.58 1939.15 1881.24 2342.59 2074.9 1854.31 1788.18 1338.79 1194.92 TRUE FALSE 1715.896531 1773.112297 1807.525901 2026.133431 2249.27968 2192.379045 1730.612363 1772.546131 1477.962011 1342.955711 1.277701504 1.320305862 1.345931133 1.508712026 1.674872568 1.632502865 1.288659298 1.31988428 1.100529228 1 10.39119601 -8.152247109 1.475477569 1.006098058 1.452900275 0.597759077 0.127788754 0.313411195 1.246212167 0.135284017 0.042733648 7.04E-09 8.152247109 0.446802216 VREEEIEVDSR ddPTM_A459_MK2206_30min_R1 2 VREEEIEVDSR 11 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 0 ; 160.86 0.0015068 27522000 11600.5 12223 12221.6 10769.1 12433.9 10769.3 13138.1 12376.7 10706.8 9166.2 FALSE TRUE 10613.81656 11427.28048 11392.03184 11598.53795 11938.63143 11379.04846 12261.68132 12268.49182 11819.81017 10301.77806 1.030289771 1.10925322 1.105831613 1.125877289 1.158890375 1.104571308 1.190249028 1.190910127 1.147356321 1 13.33060574 -3.21250108 0.748373476 1.142412888 5.64E-10 0.220962489 0.052310719 30.99597168 1.999000915 0.018741049 49.56064768 0.000613054 3.21250108 -1.142412887 VREEEIEVDSR ddPTM_A459_MK2206_30min_R2 2 VREEEIEVDSR 11 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 0 ; 160.86 0.001575 25236000 70285 105321 92327 119098 115396 108176 125549 89672 103928 91766 FALSE TRUE 75666.07364 100090.9123 95405.1361 109367.3124 110864.9732 112292.7135 109064.2655 101392.4383 112967.4696 88771.68294 0.852367232 1.12750946 1.074724878 1.232006748 1.248877678 1.264960962 1.228592969 1.14217096 1.272561991 1 16.43781193 -4.130915378 1.030761029 1.205465162 1.62E-16 0.582341384 0.083745288 3.946678224 1.313914729 0.02509878 7.244272335 7.40E-05 4.130915378 -1.205465162 VREEYPDR ddPTM_A459_MK2206_30min_R1 2 VREEYPDR 8 1 A0A0B4J269;Q13509;Q13509-2;G3V2A3 A0A0B4J269 TUBB3 Tubulin beta-3 chain 0 ; 112.11 0.031882 90524000 10153.2 9459.4 9779 7844.1 8652.2 8441.5 10467.8 9925.6 5794.2 6439.6 FALSE TRUE 9289.617023 8843.591341 9115.228726 8448.253941 8307.564553 8919.450435 9769.512162 9838.821526 6396.527825 7237.386265 1.283559656 1.22193165 1.259464176 1.167307317 1.147868063 1.23241321 1.349867453 1.359444027 0.883817388 1 12.82125306 -8.267537627 24.99958022 0.941908656 1.248147285 0.761385753 0.069563738 272.9125907 1118779.199 0.066928292 0.019037445 5.40E-09 8.267537627 0.30623863 VREEYPDR ddPTM_A459_MK2206_30min_R2 3 VREEYPDR 8 1 A0A0B4J269;Q13509;Q13509-2;G3V2A3 A0A0B4J269 TUBB3 Tubulin beta-3 chain 0 ;; 117.81 0.0079256 66678000 84208 118949 99921 114973 106137 120069 111990 90982.3 96371 93972 FALSE TRUE 90655.02922 113042.1656 103252.3163 105579.3381 101969.5281 124638.3099 97285.57848 102873.999 104753.1754 90905.70134 0.997242504 1.243510187 1.135817828 1.161416023 1.121706632 1.37107253 1.070181265 1.131656183 1.152327894 1 16.47208316 -9.261479299 0.868580489 0.998625941 1.163380018 0.191725283 0.094280601 5.12851061 4.753113809 0.108811529 0.029679703 5.48E-10 9.261479299 0.164754077 VRELELELDR ddPTM_A459_MK2206_30min_R1 2 VRELELELDR 10 1 O94992 O94992 HEXIM1 Protein HEXIM1 0 ; 196.44 0.00048802 8426400 4297.5 4625 4419.5 4287.8 5003.6 4193.1 4557.8 4075.2 3726.7 2960.3 FALSE TRUE 3931.975058 4323.911659 4119.516653 4618.047099 4804.296017 4430.509698 4253.757478 4039.570956 4114.103801 3327.044313 1.181822269 1.299625509 1.238191099 1.38803294 1.444013234 1.331665371 1.278539472 1.214162054 1.236564173 1 11.70002537 -8.786782342 0.879579208 1.001507005 1.314978494 0.617768398 0.071600833 0.69741657 1.046478553 0.075894129 0.025761626 1.63E-09 8.786782342 0.313471488 VRGEGPGEAGGPLT(ph)PR ddPTM_A459_MK2206_30min_R1 2 VRGEGPGEAGGPLTPR 16 1 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 VRGEGPGEAGGPLT(1)PR;VRGEGPGEAGGPLT(1)PR 99.343 0.0091371 13412000 5124.2 5582.1 4674.3 4541 5412.5 4319.1 3822.8 3917.9 2641.8 2007.11 TRUE FALSE 4688.359882 5218.704275 4357.021539 4890.748607 5196.908664 4563.64371 3567.787987 3883.646213 2916.424564 2255.76594 2.07838934 2.313495467 1.931504268 2.168109962 2.303833289 2.023101612 1.581630401 1.721653007 1.292875521 1 11.13940166 -7.954599928 0.761204197 1.013949156 2.175923656 0.882363174 0.142715608 0.201734846 0.232149606 0.136805262 0.059339656 1.11E-08 7.954599928 1.161974499 up VRGEVAPDAK ddPTM_A459_MK2206_30min_R1 1 VRGEVAPDAK 10 1 P09382;F8WEI7 P09382 LGALS1 Galectin-1 0 102.05 0.044261 12834000 6921.9 7141.5 6412.2 5914.6 5402.1 5922.1 6286.6 6616.5 2499.9 4725.6 FALSE TRUE 6333.156057 6676.587052 5976.957729 6370.143517 5186.922918 6257.404184 5867.232385 6558.652638 2759.773551 5311.043004 1.192450532 1.257114101 1.125383041 1.199414788 0.97662981 1.178187444 1.104723193 1.234908592 0.519629299 1 12.3747795 -8.246492089 24.99749309 0.759814625 1.154929573 0.597508561 0.130892537 434.8009851 727153.9631 0.082733263 0.030992094 5.67E-09 8.246492089 0.395114948 VRGEVAPDAK ddPTM_A459_MK2206_30min_R2 1 VRGEVAPDAK 10 1 P09382;F8WEI7 P09382 LGALS1 Galectin-1 0 107.03 0.032524 11027000 213180 252880 229250 256470 241460 202720 287830 204030 217710 236920 FALSE TRUE 229501.2247 240322.3469 236893.0806 235515.5806 231979.0672 210434.6517 250037.5753 230697.4215 236646.0223 229189.3198 1.001360905 1.04857568 1.033613088 1.027602773 1.01217224 0.918169537 1.090965214 1.006580157 1.032535122 1 17.80618029 -11.26743731 3.507722005 0.99756208 1.019188319 0.018650456 0.041476928 0.000876808 6.39E-05 0.04452912 0.009582583 5.40E-12 11.26743731 0.021626238 VRGGAPDPSPGATATPGAPAQPS(ph)SPDAR ddPTM_A459_MK2206_30min_R1 3 VRGGAPDPSPGATATPGAPAQPSSPDAR 28 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 VRGGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDAR;VRGGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDAR;VRGGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDAR 188.49 1.03E-32 50765700 4440.89 4812.21 5087.59 5010.81 6463.2 4628.27 4162.85 5212.46 2865.18 2096.46 TRUE FALSE 4063.168985 4498.934254 4742.258566 5396.743454 6205.757058 4890.318648 3885.153872 5166.888012 3163.025714 2356.185292 1.724469208 1.909414454 2.012684903 2.290458001 2.633815379 2.075523798 1.648916953 2.19290394 1.342435047 1 11.20223728 -8.41304714 3.309915173 1.005283965 2.06894513 0.646046812 0.268197965 0.152646391 3.058643799 0.280024579 0.074689288 3.86E-09 8.41304714 1.063661165 VRGGAPDPSPGATATPGAPAQPS(ph)SPDAR ddPTM_A459_MK2206_30min_R2 2 VRGGAPDPSPGATATPGAPAQPSSPDAR 28 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 VRGGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDAR;VRGGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDAR 142.37 3.80E-13 42650000 22081 69843 54382 70416 82357 83945 62139 44506 84709 44934 TRUE FALSE 23771.53834 66374.69818 56195.06874 64662.78755 79123.25037 87139.5858 53980.07466 50323.08701 92076.8357 43467.80726 0.546876869 1.526985196 1.292797412 1.487601782 1.820272412 2.004692468 1.241840297 1.157709353 2.118276525 1 15.4076597 -4.761388978 10.17747497 1.530086915 0.543201242 0.409902285 0.348752057 0.071708184 171.3962361 0.085697096 0.484708216 1.73E-05 4.761388978 -0.986885673 VRHNRVLDNYPMPIGHFWR ddPTM_A459_MK2206_30min_R2 1 VRHNRVLDNYPMPIGHFWR 19 2 P51511 P51511 MMP15 Matrix metalloproteinase-15 0 63.462 0.043639 5589600 50827 47441 58694 38043 41243 24541 52971 36288 29699 52473 FALSE TRUE 54718.3542 45085.14893 60650.82867 34934.76521 39623.59259 25474.92495 46015.84407 41030.9662 32282.16534 50760.81031 1.077964553 0.888188125 1.194835707 0.688223159 0.78059417 0.501862062 0.90652304 0.808319764 0.635966312 1 15.63142748 -5.773657207 24.99932581 0.748406828 1.037115344 0.450145065 0.147884591 190.1804041 389134.6337 0.040033567 0.059876042 1.68E-06 5.773657207 0.288708516 VRLS(ph)PGPSSQPGLPGSLPQPPQPLHR ddPTM_A459_MK2206_30min_R2 1 VRLSPGPSSQPGLPGSLPQPPQPLHR 26 1 I3L2J0 I3L2J0 CIC 1 VRLS(0.77)PGPS(0.184)S(0.046)QPGLPGSLPQPPQPLHR 80.016 6.25E-05 3849200 7344 14310 11886 11426 8587.8 12443 10774 10060 9132.5 11462 TRUE FALSE 7906.262287 13599.38621 12282.27331 10492.45925 8250.599822 12916.52708 9359.360858 11374.87654 9926.828342 11087.99588 0.713047008 1.226496326 1.107709043 0.946289967 0.744101992 1.164910884 0.844098515 1.025873085 0.895277059 1 13.43671101 -5.847968502 11.04999351 0.943196296 1.03675258 0.033539541 0.1602505 1.239846195 149.7786571 0.043565471 0.064669797 1.42E-06 5.847968502 0.093556284 VRMADNEVMDAFR ddPTM_A459_MK2206_30min_R1 2 VRMADNEVMDAFR 13 1 O75528 O75528 TADA3 Transcriptional adapter 3 0 ; 99.732 0.030835 100564000 11184.7 10850.6 11344 9447.3 10980.6 10748.9 12006.4 10368.8 10025.1 9144.2 FALSE TRUE 10233.38253 10144.22397 10574.00089 10174.93268 10543.21945 11357.49343 11205.47496 10278.14667 11067.24502 10277.05253 0.995750727 0.987075228 1.028894311 0.990063314 1.025899149 1.105131398 1.090339368 1.000106465 1.076889019 1 13.32713894 -6.528105548 24.93010349 1.057715291 1.002330167 0.359878026 0.03385589 148.8310558 709866.8032 0.011118036 0.011154534 2.96E-07 6.528105548 -0.055385123 VRPAS(ph)TGGLSLLPPPPGGK ddPTM_A459_MK2206_30min_R1 1 VRPASTGGLSLLPPPPGGK 19 1 D6RB24;Q9NVZ3-4;Q9NVZ3;Q9NVZ3-2 D6RB24 NECAP2 Adaptin ear-binding coat-associated protein 2 1 VRPAS(0.638)T(0.22)GGLS(0.142)LLPPPPGGK 111.35 0.00033962 36820000 6106.4 6924.2 6149.1 6286.7 5433.2 5789.8 5372 5447.4 4641.8 3916.9 TRUE FALSE 5587.018614 6473.433321 5731.716224 6770.902723 5216.784139 6117.613473 5013.643682 5399.773956 5124.331721 4402.155143 1.269155319 1.47051458 1.30202504 1.538088164 1.185052314 1.389686023 1.138906631 1.226620548 1.164050688 1 12.10399428 -7.912105314 0.479407833 1.004639028 1.39905153 0.566696787 0.101510884 0.627518627 0.359304296 0.101851476 0.067617289 1.22E-08 7.912105314 0.394412502 VRPAS(ph)TGGLSLLPPPPGGK ddPTM_A459_MK2206_30min_R2 2 VRPASTGGLSLLPPPPGGK 19 1 D6RB24;Q9NVZ3-4;Q9NVZ3;Q9NVZ3-2 D6RB24 NECAP2 Adaptin ear-binding coat-associated protein 2 1 VRPAS(0.473)T(0.473)GGLS(0.054)LLPPPPGGK;VRPAS(0.482)T(0.482)GGLS(0.036)LLPPPPGGK 107.92 0.00041819 46379000 113540 129606 127192 137402 120983 100466 109623 93836 98590 91535 TRUE FALSE 122232.7097 123169.9545 131432.5178 126175.8171 116232.5995 104289.304 95229.36842 106100.6874 107165.18 88548.22045 1.380408427 1.390992997 1.484304452 1.424939049 1.312647492 1.177768492 1.075452086 1.198224954 1.210246569 1 16.43417569 -6.632261508 2.305156 1.135760246 1.422145456 0.828970702 0.062220135 0.123047002 1.332888116 0.023249124 0.023289307 2.33E-07 6.632261508 0.286385211 VRPASTGGLS(ph)LLPPPPGGK ddPTM_A459_MK2206_30min_R1 1 VRPASTGGLSLLPPPPGGK 19 1 D6RB24;Q9NVZ3-4;Q9NVZ3;Q9NVZ3-2 D6RB24 NECAP2 Adaptin ear-binding coat-associated protein 2 1 VRPAS(0.102)T(0.102)GGLS(0.797)LLPPPPGGK 96.591 0.00089173 35698000 3997.8 4719.9 4739.7 4272.3 5132.4 4646.2 3605 3709.1 3079.4 3191.8 TRUE FALSE 3657.766117 4412.633652 4417.98237 4601.353286 4927.96564 4909.263829 3364.517028 3676.67173 3399.51465 3587.224281 1.019664741 1.230096951 1.231587998 1.282705771 1.373754539 1.36854109 0.937916552 1.024935003 0.947672736 1 11.80865223 -7.27050808 24.97353004 0.979708974 1.256236298 0.666705084 0.094662829 427.0659483 1176056.15 0.041987383 0.028770021 5.36E-08 7.27050808 0.276527324 VRPLPS(ph)Y(ph)DDQNFHVY(ph)VS(ph)KTK ddPTM_A459_MK2206_30min_R2 1 VRPLPSYDDQNFHVYVSKTK 20 2 A0A0C4DGM4;A2RU49-2;A2RU49-3;A2RU49 A0A0C4DGM4 HYKK Hydroxylysine kinase 4 VRPLPS(1)Y(1)DDQNFHVY(0.961)VS(0.723)KT(0.316)K 44.382 0.045645 0 29983 25879 33580 24343 28490 18846 34635 25644 20860 38797 TRUE FALSE 32278.52153 24593.88649 34699.54044 22354.09903 27371.33945 19563.19774 30087.3829 28995.75885 22674.36509 37531.05707 0.860048292 0.655294266 0.924555372 0.595616025 0.729298389 0.521253577 0.80166628 0.772580394 0.604149386 1 15.1957973 -10.52798687 5.685324075 1.000000623 0.717460301 0.332275657 0.119806428 9.06E-07 1.58E-07 0.111027773 0.026928131 2.96E-11 10.52798687 -0.282540322 VRPSSDLNNSTGQS(ph)PHHK ddPTM_A459_MK2206_30min_R2 1 VRPSSDLNNSTGQSPHHK 18 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 VRPSSDLNNS(0.045)T(0.045)GQS(0.91)PHHK 58.461 0.024177 3354700 10132 13179 9885.7 12029 12842 13159 15595 14864 10811 14586 TRUE FALSE 10907.71371 12524.55002 10215.2843 11046.19222 12337.75855 13659.77497 13547.35777 16806.77584 11751.32124 14110.06001 0.773045168 0.887632654 0.723971712 0.782859337 0.874394478 0.968087659 0.960120492 1.191120082 0.832832832 1 13.7844365 -6.68633048 1.964993903 1.009172441 0.793897649 0.519871947 0.090116818 0.252678153 2.006027222 0.034142086 0.033014125 2.06E-07 6.68633048 -0.215274792 VRS(ph)LETENR ddPTM_A459_MK2206_30min_R1 2 VRSLETENR 9 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 VRS(0.991)LET(0.009)ENR;VRS(0.993)LET(0.007)ENR 131.17 0.017407 51395800 4482.46 3975.84 4065.38 4272.61 4718.9 3993.14 4094.12 4311.44 3495.31 2982.27 TRUE FALSE 4101.203239 3717.012093 3789.433332 4601.687163 4530.936221 4219.228136 3821.008725 4273.745535 3858.659983 3351.736123 1.223605645 1.108981124 1.130588207 1.372926446 1.351817701 1.258818708 1.140008815 1.275084129 1.151242175 1 11.71069286 -8.590239303 4.019930509 1.000068168 1.231231804 0.417749608 0.084167333 0.34447343 15.32377672 0.089527169 0.023448805 2.57E-09 8.590239303 0.231163636 VRS(ph)LETENR ddPTM_A459_MK2206_30min_R2 1 VRSLETENR 9 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 VRS(0.993)LET(0.007)ENR 81.676 0.023796 40892000 25967 34992 38458 38473 44134 41439 36486 30932 29210 36739 TRUE FALSE 27955.05349 33254.34816 39740.17053 35329.63283 42401.0774 43015.99018 31695.34437 34974.91861 31750.633 35540.20944 0.786575373 0.935682392 1.118174911 0.994074976 1.193045232 1.210347121 0.891816477 0.98409433 0.893372141 1 15.11716456 -4.910452435 3.232810401 1.040228092 0.780826967 0.349526157 0.104698737 0.325263334 5.99531259 0.028778036 0.180212049 1.23E-05 4.910452435 -0.259401125 VRS(ph)PDEALPGGLSGCSSGSGHSPYALER ddPTM_A459_MK2206_30min_R2 3 VRSPDEALPGGLSGCSSGSGHSPYALER 28 1 Q5JSZ5-5 Q5JSZ5-5 PRRC2B Protein PRRC2B 1 VRS(1)PDEALPGGLSGCSSGSGHSPYALER;VRS(1)PDEALPGGLSGCSSGSGHSPYALER;VRS(1)PDEALPGGLSGCSSGSGHSPYALER 111.3 2.50E-10 16427000 17796.4 42310.1 35712.9 48614 55410 56653 48285 33402 51581 34475.1 TRUE FALSE 19158.90607 40209.04196 36903.55026 44642.08069 53234.32499 58808.96961 41945.1215 37767.75609 56067.42214 33350.18031 0.574476836 1.205661906 1.106547249 1.338585887 1.596223004 1.763377861 1.257717983 1.132460327 1.681172984 1 15.02540694 -4.586788659 1.101497395 1.408555147 3.80E-11 0.492804379 0.239401074 2.120394581 1.612614658 0.075830568 3.851229144 2.59E-05 4.586788659 -1.408555147 VRVESGYFS(ph)LEK ddPTM_A459_MK2206_30min_R2 1 VRVESGYFSLEK 12 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1;J3KSW8;Q6WCQ1-3;A0A1W2PPU9 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 VRVESGYFS(1)LEK 70.451 0.034766 2312300 13774 19062 17893 15189 17606 15507 15448 14291 13731 16613 TRUE FALSE 14828.54803 18115.4088 18489.54369 13948.01011 16914.69998 16097.12975 13419.65904 16158.88277 14925.29756 16070.91917 0.922694457 1.12721672 1.150496962 0.867903694 1.052503581 1.001630932 0.835027474 1.005473464 0.928714618 1 13.97216483 -5.757990619 24.99999119 0.957016533 1.072844099 0.267369426 0.083939625 115.3508809 836160.1057 0.022834705 0.037608864 1.75E-06 5.757990619 0.115827566 VRVRT(ph)S(ph)GSVKY(ph)SR ddPTM_A459_MK2206_30min_R2 1 VRVRTSGSVKYSR 13 3 A0A087X1Z0;A0A087WXD8;B4DKF8 A0A087X1Z0 PSD3 3 VRVRT(0.991)S(0.906)GS(0.03)VKY(0.904)S(0.17)R 88.163 0.032623 5412500 952.54 13432 5154.6 33529 17512 85899 0 9145.1 39972 1784.3 TRUE FALSE 1025.467195 12764.98641 5326.451791 30789.57345 16824.39089 89167.94664 0 10340.39597 43448.69231 1726.078437 0.594102315 7.395368679 3.085868913 17.83787618 9.747176332 51.65926688 0 5.990687183 25.17191072 1 10.75328231 -2.625876772 7.449587405 10 10.64953989 0 15.38607301 0 0 3.563505892 0 0.002366591 2.625876772 0.649539888 VRVS(ph)PQDANPLMANGTLTR ddPTM_A459_MK2206_30min_R1 2 VRVSPQDANPLMANGTLTR 19 1 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6 O60716-5 CTNND1 Catenin delta-1 1 VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR 108.79 0.00039824 112298000 4707.3 4394.7 4412.7 3527.7 4658.2 4470 4675.7 4589.7 3616.6 3652.4 TRUE FALSE 4306.919416 4108.604231 4113.178218 3799.404065 4472.65403 4723.087537 4363.792584 4549.572737 3992.558512 4104.886886 1.049217563 1.00090559 1.002019869 0.925580697 1.089592516 1.150601142 1.063072554 1.108330841 0.972635452 1 12.00312675 -6.290895124 24.98307616 1.07373511 0.995435456 0.263128731 0.055654191 852.3826571 722951.0578 0.017223814 0.019532483 5.12E-07 6.290895124 -0.078299653 VRVS(ph)PQDANPLMANGTLTR ddPTM_A459_MK2206_30min_R2 7 VRVSPQDANPLMANGTLTR 19 1 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6 O60716-5 CTNND1 Catenin delta-1 1 VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR 165.49 3.45E-08 123809200 122334 142788 132904 156064 145147 154487 159209 122387 148087 146305 TRUE FALSE 131699.9851 135697.3556 137334.953 143313.072 139447.7995 160366.111 138304.6671 138383.4011 160967.3396 141531.0798 0.930537556 0.95878132 0.970351906 1.012590819 0.985280404 1.133080531 0.977203503 0.977759806 1.137328563 1 17.11075937 -5.699296046 1.099831385 1.037646248 0.934775222 0.323906355 0.054958362 0.747870698 1.699841682 0.020058187 0.06229074 2.00E-06 5.699296046 -0.102871026 VRYDS(ph)SNQVK ddPTM_A459_MK2206_30min_R1 1 VRYDSSNQVK 10 1 A0A087WZ12;A0A087WT34;A0A087X1H1;A0A0A0MTS6;K7EIE8;O95983-2;O95983 A0A087WZ12 MBD3 Methyl-CpG-binding domain protein 3 1 VRYDS(0.746)S(0.254)NQVK 114.76 0.032551 8479600 5339.9 6285.4 6527.6 5681.2 5627 5625.9 8290.3 8464.9 8292.6 7419.6 TRUE FALSE 4885.713464 5876.219318 6084.524699 6118.767008 5402.864675 5944.433596 7737.269214 8390.892272 9154.645445 8338.796063 0.585901541 0.704684378 0.729664649 0.733771034 0.647919032 0.712864729 0.927864065 1.00624745 1.09783779 1 13.02562339 -7.398914095 2.172378717 1.041942541 0.684614394 0.92168071 0.046863832 0.084484635 0.779291417 0.025741056 0.014944311 3.99E-08 7.398914095 -0.357328147 VRYDS(ph)SNQVK ddPTM_A459_MK2206_30min_R2 1 VRYDSSNQVK 10 1 A0A087WZ12;A0A087WT34;A0A087X1H1;A0A0A0MTS6;K7EIE8;O95983-2;O95983 A0A087WZ12 MBD3 Methyl-CpG-binding domain protein 3 1 VRYDS(0.752)S(0.248)NQVK 67.118 0.046069 10068000 21932 27017 30008 25138 28282 21671 40651 32066 24796 32501 TRUE FALSE 23611.13078 25675.37507 31008.45174 23084.14499 27171.50657 22495.70509 35313.47487 36257.1363 26952.71126 31440.49503 0.75097834 0.816633932 0.986258381 0.73421697 0.864220062 0.715500983 1.123184442 1.153198646 0.857261033 1 14.94033631 -7.265405766 24.99869198 1.046177588 0.81839797 0.521628598 0.103780996 277.1523322 1746778.917 0.041810499 0.029363208 5.43E-08 7.265405766 -0.227779618 VRYDSS(ph)NQVK ddPTM_A459_MK2206_30min_R2 1 VRYDSSNQVK 10 1 A0A087WZ12;A0A087WT34;A0A087X1H1;A0A0A0MTS6;K7EIE8;O95983-2;O95983 A0A087WZ12 MBD3 Methyl-CpG-binding domain protein 3 1 VRYDS(0.18)S(0.82)NQVK 118.61 0.026864 5459900 11098 15375 16151 17392 16145 17613 22301 19747 21142 23427 TRUE FALSE 11947.67141 14611.49986 16689.46628 15971.01797 15511.06618 18283.27506 19372.85191 22328.0007 22980.89294 22662.57891 0.527198227 0.644741268 0.736432793 0.704730827 0.684435176 0.806760569 0.854838807 0.985236534 1.014045799 1 14.46802442 -7.176681898 0.680774443 1.038091256 0.623453387 0.900026626 0.049793631 0.226341111 0.212614915 0.044973454 0.032086846 6.66E-08 7.176681898 -0.414637869 VS(ph)DFGGR ddPTM_A459_MK2206_30min_R1 1 VSDFGGR 7 0 I3L4R8;P27694 I3L4R8 RPA1 "Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed" 1 VS(1)DFGGR 110.41 0.015429 6963400 2814.4 2809 2929.2 2482.6 2587.5 2542.3 2739.9 2726.2 2562.5 2886.4 TRUE FALSE 2575.020501 2626.133589 2730.374065 2673.810282 2484.434396 2686.242829 2557.12627 2702.365121 2828.881045 3243.989023 0.793782125 0.809538371 0.841671795 0.824235305 0.765857831 0.828067792 0.788266006 0.83303769 0.872037798 1 11.66355322 -8.696809026 1.453972224 0.99969768 0.808497104 0.884374318 0.020993523 0.209353157 0.871041646 0.020302282 0.005964569 2.01E-09 8.696809026 -0.191200576 VS(ph)DFGGR ddPTM_A459_MK2206_30min_R2 1 VSDFGGR 7 0 I3L4R8;P27694 I3L4R8 RPA1 "Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed" 1 VS(1)DFGGR 80.219 0.0453 2736800 34771 49537 40973 73098 52829 51408 52305 45409 47951 39588 TRUE FALSE 37433.09449 47077.06461 42339.01937 67125.65957 50754.66802 53364.36746 45437.29067 51344.11221 52121.6913 38296.2468 0.977461178 1.229286642 1.105565764 1.752799952 1.325317029 1.393462073 1.186468504 1.340708725 1.361013041 1 15.22491539 -4.914125126 1.62034045 1.339044927 0.926209706 0.211577612 0.190182512 1.123777817 3.516642833 0.052693136 0.681071491 1.22E-05 4.914125126 -0.412835221 VS(ph)DSESEGPQK ddPTM_A459_MK2206_30min_R2 2 VSDSESEGPQK 11 0 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 1 VS(0.989)DS(0.01)ES(0.001)EGPQK;VS(0.978)DS(0.022)ESEGPQK 161.25 0.00060989 46103000 227790 164396 171217 183078 162928 97799 209520 170457 118132 242520 TRUE FALSE 245229.7775 156232.3337 176925.2893 168119.9418 156530.6281 101520.8095 182009.7723 192736.3152 128406.9078 234606.5923 1.045280847 0.665933264 0.754136052 0.716603656 0.66720473 0.432727864 0.775808431 0.821529836 0.547328643 1 17.83988403 -10.50485691 15.84842997 0.999996912 0.709223641 0.235380211 0.154386464 0 0 0.147783134 0.035842675 3.13E-11 10.50485691 -0.29077327 VS(ph)DSPSHIATK ddPTM_A459_MK2206_30min_R1 1 VSDSPSHIATK 11 0 Q9P2D3 Q9P2D3 HEATR5B HEAT repeat-containing protein 5B 1 VS(0.81)DS(0.027)PS(0.163)HIATK 79.639 0.029966 10484000 7478.6 5541.2 6030.7 4625 7506.1 7291.9 7274.4 7031.3 5296.9 4901.9 TRUE FALSE 6842.505798 5180.466873 5621.352886 4981.218301 7207.116143 7704.761076 6789.138049 6969.826085 5847.53171 5509.184379 1.242017934 0.940332818 1.020360275 0.904166199 1.308200206 1.398530263 1.232330883 1.265128485 1.06141514 1 12.42762303 -6.268397355 24.98022192 1.23464023 1.020094625 0.293709729 0.136864986 601.2089514 2158430.662 0.041743458 0.048371757 5.39E-07 6.268397355 -0.214545605 VS(ph)DSPSHIATK ddPTM_A459_MK2206_30min_R2 1 VSDSPSHIATK 11 0 Q9P2D3 Q9P2D3 HEATR5B HEAT repeat-containing protein 5B 1 VS(0.645)DS(0.335)PS(0.019)HIATK 125.36 0.0033649 7318200 62916 64844 52057 63401 62923 54701 71441 47802 55015 70789 TRUE FALSE 67732.89733 61623.94125 53792.5544 58220.93549 60452.32686 56782.68489 62060.71088 54049.88553 59800.10526 68479.16073 0.989102329 0.899893349 0.785531742 0.850199314 0.882784284 0.829196566 0.906271488 0.789289544 0.873259903 1 16.0633774 -4.856884719 3.709298802 0.856656517 0.993479712 0.280453688 0.058806614 0.263987074 6.087296231 0.013673564 0.085775196 1.39E-05 4.856884719 0.136823195 VS(ph)EGGPAEIAGLQIGDK ddPTM_A459_MK2206_30min_R1 3 VSEGGPAEIAGLQIGDK 17 0 O14907 O14907 TAX1BP3 Tax1-binding protein 3 1 VS(1)EGGPAEIAGLQIGDK;VS(1)EGGPAEIAGLQIGDK;VS(1)EGGPAEIAGLQIGDK 199.41 6.18E-08 21323600 5393.45 6316.88 5952.46 4362.71 4336.66 4417.22 5165.51 4784.7 6591 5539.38 TRUE FALSE 4934.708755 5905.649964 5548.4236 4698.72668 4163.921649 4667.319179 4820.928253 4742.867872 7276.158036 6225.640215 0.792642778 0.94860123 0.89122137 0.754737909 0.668834289 0.749693047 0.774366665 0.761828135 1.168740529 1 12.60400649 -8.255095352 24.97291241 1.084370274 0.793774353 0.666191625 0.082570884 289.5861942 1139951.547 0.06498616 0.023210261 5.56E-09 8.255095352 -0.290595921 VS(ph)EGGPAEIAGLQIGDK ddPTM_A459_MK2206_30min_R2 3 VSEGGPAEIAGLQIGDK 17 0 O14907 O14907 TAX1BP3 Tax1-binding protein 3 1 VS(1)EGGPAEIAGLQIGDK;VS(1)EGGPAEIAGLQIGDK;VS(1)EGGPAEIAGLQIGDK 186.36 6.02E-08 5662200 48481.1 50208 47145.5 54240 60352 42665 61127.5 49819 46995 61308.1 TRUE FALSE 52192.85029 47714.74373 48717.30744 49808.41849 57982.27724 44288.64647 53101.38582 56330.51435 51082.54015 59307.62172 0.880036137 0.80452971 0.821434177 0.839831662 0.97765305 0.746761465 0.895355172 0.94980228 0.861314932 1 15.8559299 -9.858185673 0.217221676 1.077521364 0.818579967 0.337667458 0.061889655 12.65576531 0.87038023 0.837701959 0.164102441 1.39E-10 9.858185673 -0.258941397 VS(ph)FRDPLVSEGGPR ddPTM_A459_MK2206_30min_R1 2 VSFRDPLVSEGGPR 14 1 H0Y413;O43900-2;O43900 H0Y413 PRICKLE3 Prickle-like protein 3 1 VS(1)FRDPLVSEGGPR;VS(1)FRDPLVSEGGPR 113.54 0.0017944 7183400 1845.93 2248.16 2284.4 2103.83 2158.27 2120.49 2337.19 1994.61 2002.53 2117.1 TRUE FALSE 1688.92396 2101.804375 2129.341293 2265.867351 2072.301536 2240.550311 2181.28032 1977.171335 2210.70016 2379.382331 0.709816131 0.883340331 0.894913468 0.952292249 0.870940962 0.941652076 0.916742253 0.830959913 0.929106739 1 11.21637139 -4.709324403 2.704173259 0.911176605 0.645840776 0.663822177 0.043846652 0.373153747 3.032057359 0.010778609 0.243327836 1.95E-05 4.709324403 -0.26533583 VS(ph)FRDPLVSEGGPR ddPTM_A459_MK2206_30min_R2 3 VSFRDPLVSEGGPR 14 1 H0Y413;O43900-2;O43900 H0Y413 PRICKLE3 Prickle-like protein 3 1 VS(1)FRDPLVSEGGPR;VS(1)FRDPLVSEGGPR;VS(1)FRDPLVSEGGPR 100.73 0.004833 5580600 9118.8 12091.7 13471.1 10913.4 12191.2 13374.7 12379.4 10805.5 12209.3 11757.7 TRUE FALSE 9816.942339 11491.24376 13920.21975 10021.74031 11712.51223 13883.68358 10753.96991 12217.81595 13271.24284 11374.04721 0.863100193 1.010303856 1.223858095 0.881105918 1.029757659 1.220645855 0.945483143 1.074183685 1.166800401 1 13.47345808 -4.828542727 4.052001127 1.066263029 0.854832082 0.248858091 0.106754079 0.295476243 8.421869998 0.026206936 0.161188523 1.48E-05 4.828542727 -0.211430948 VS(ph)GRTSPPLLDR ddPTM_A459_MK2206_30min_R1 1 VSGRTSPPLLDR 12 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VS(0.985)GRT(0.013)S(0.002)PPLLDR 113.54 0.0032523 256080000 8154.8 8335.5 8488.6 10590 12020 7572.6 7034 10540 3438.5 1191 TRUE FALSE 7461.191437 7792.857435 7912.417483 11405.64363 11541.21795 8001.354068 6564.774694 10447.84989 3795.94438 1338.550072 5.574084673 5.821864718 5.911185282 8.52089427 8.622178723 5.977627761 4.904392322 7.805348573 2.835862819 1 10.38645539 -8.430419595 3.93671963 1.042281225 6.630538797 0.713620687 1.220406295 0.118632068 3.181528385 1.266653306 0.333168189 3.71E-09 8.430419595 5.588257571 VS(ph)GRTSPPLLDR ddPTM_A459_MK2206_30min_R2 3 VSGRTSPPLLDR 12 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VS(0.925)GRT(0.016)S(0.059)PPLLDR;VS(0.949)GRT(0.048)S(0.003)PPLLDR;VS(0.772)GRT(0.217)S(0.011)PPLLDR 86.699 0.01624 269352000 129263 627626 334205 615524 912690 782510 533394 361528 944060 312749 TRUE FALSE 139159.4747 596459.0055 345347.2279 565233.7202 876853.2047 812288.9664 463358.7271 408780.9509 1026172.632 302544.0257 0.459964378 1.971478379 1.141477598 1.868269317 2.898266467 2.684862028 1.531541487 1.351145341 3.391812579 1 18.20678557 -4.751334942 0.96924698 2.121115546 2.91E-18 0.251193985 0.758888201 3.231307877 2.315139784 0.255841501 7.322195493 1.77E-05 4.751334942 -2.121115546 VS(ph)GVDGYETEGIR ddPTM_A459_MK2206_30min_R2 2 VSGVDGYETEGIR 13 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 VS(1)GVDGYETEGIR;VS(1)GVDGYETEGIR 121.24 0.0019869 1738300 11462.3 10217.1 11000.1 11569 10914.4 10362.1 10279 10479.2 8385.6 10628.6 TRUE FALSE 12339.8625 9709.733671 11366.83784 10623.77569 10485.84582 10756.43698 8929.354953 11848.86742 9114.96433 10281.78965 1.200166792 0.944362217 1.105531063 1.033261334 1.019846366 1.046163882 0.868463104 1.152412938 0.886515348 1 13.32780378 -4.748192207 24.86439376 1.012354611 1.200167279 0.319806579 0.084409936 725.0055146 1360719.345 0.019318691 0.358458207 1.79E-05 4.748192207 0.187812668 VS(ph)LDVNHFAPDELTVK ddPTM_A459_MK2206_30min_R2 1 VSLDVNHFAPDELTVK 16 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 VS(1)LDVNHFAPDELTVK 83.167 0.02766 0 12032 9654.8 11158 8682.7 12090 8644 10519 9386.6 8712.9 8876.7 TRUE FALSE 12953.17917 9175.356671 11530.00215 7973.295635 11615.28585 8972.953477 9137.842664 10613.46085 9470.732293 8587.054006 1.508454374 1.068510419 1.342719184 0.928525153 1.352650844 1.044939681 1.064141749 1.235983941 1.102908202 1 13.06794755 -4.754931711 24.97887591 1.137190559 1.508455003 0.418958045 0.134360119 207.4692605 796270.7363 0.03063258 0.285596843 1.76E-05 4.754931711 0.371264445 VS(ph)LERLDLDLTADSQPPVFK ddPTM_A459_MK2206_30min_R1 2 VSLERLDLDLTADSQPPVFK 20 1 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 VS(0.999)LERLDLDLTADSQPPVFK;VS(1)LERLDLDLTADSQPPVFK 156.36 9.16E-07 35174000 12424.4 12322.2 12919.4 12894.9 12173.6 10213.8 10630.5 12675.9 8378.4 5641.7 TRUE FALSE 11367.63954 11520.02254 12042.46712 13888.06743 11688.69973 10792.09653 9921.358741 12565.07594 9249.364662 6340.636389 1.792823124 1.816855885 1.899252123 2.190327056 1.843458451 1.702052581 1.56472602 1.981674263 1.458743901 1 12.63041193 -9.170711941 0.480542024 0.93193301 1.906380053 0.71844553 0.164626138 1.403786601 0.531526107 0.361065285 0.094506203 6.75E-10 9.170711941 0.974447043 VS(ph)NSPEPQK ddPTM_A459_MK2206_30min_R2 1 VSNSPEPQK 9 0 O60271;O60271-3;D6RHI8 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 VS(0.51)NS(0.49)PEPQK 109.16 0.011594 108460000 148530 151280 136140 137280 138250 113300 171730 128660 120870 138460 TRUE FALSE 159901.571 143767.6552 140678.8397 126063.7849 132821.6103 117611.7109 149181.6447 145476.3038 131383.0541 133942.0615 1.193811482 1.073357044 1.05029621 0.941181459 0.991634807 0.878078996 1.113777427 1.086113668 0.980894669 1 17.03124955 -4.774541781 1.557509161 1.003292553 1.266450571 0.457147647 0.063823183 1.087729819 2.475045625 0.019245574 0.445124157 1.68E-05 4.774541781 0.263158018 VS(ph)PAAAQLADTLFSK ddPTM_A459_MK2206_30min_R2 2 VSPAAAQLADTLFSK 15 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 VS(1)PAAAQLADTLFSK;VS(0.999)PAAAQLADT(0.001)LFSK 214.34 3.43E-07 44131000 121264 84467 98191 110977 83487 81914 111711 87606 57955 126479 TRUE FALSE 130548.0651 80272.49161 101464.6389 101909.8241 80208.88089 85031.29467 97043.21151 99056.405 62995.82114 122352.0006 1.06698758 0.656078292 0.829284674 0.832923235 0.655558393 0.694972655 0.79314773 0.809601842 0.51487365 1 16.90067817 -4.750941178 24.98151837 0.749212812 1.06698825 0.358711017 0.125376364 470.4248545 1119347.954 0.02925635 0.40788384 1.77E-05 4.750941178 0.317775437 VS(ph)PDFTQESR ddPTM_A459_MK2206_30min_R2 1 VSPDFTQESR 10 0 E7EPB1;E7EQS8;Q6N021-2;Q6N021-3;Q6N021;D6RE87 E7EPB1 TET2 Methylcytosine dioxygenase TET2 1 VS(1)PDFTQESR 107.97 0.010968 6555000 11143 17379 14099 15553 20265 16792 17788 10694 13911 12843 TRUE FALSE 11996.11665 16515.98413 14569.05362 14282.27015 19469.29428 17431.03133 15452.41423 12091.74252 15120.95363 12423.93396 0.965565069 1.329368313 1.172660259 1.149577114 1.567079665 1.403020282 1.243761781 0.973261976 1.217082583 1 13.60083445 -7.644695378 6.797766452 1.072761772 1.275805569 0.236830258 0.162150756 0.327369332 18.09430772 0.079816391 0.045578295 2.27E-08 7.644695378 0.203043797 VS(ph)PENLVDK ddPTM_A459_MK2206_30min_R1 4 VSPENLVDK 9 0 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KS29;J3QKP0 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 VS(1)PENLVDK;VS(1)PENLVDK;VS(1)PENLVDK;VS(1)PENLVDK 138.2 0.0024868 162340000 12416.8 13486 13532.5 11191.1 9536.4 8765.3 12488.2 10854.5 12296.1 12390.2 TRUE FALSE 11360.68596 12608.05895 12613.9516 12053.04046 9156.544994 9261.583711 11655.13496 10759.60025 13574.3236 13925.19152 0.815836963 0.905413684 0.905836849 0.865556531 0.657552536 0.665095607 0.836982023 0.772671617 0.974803368 1 13.76540955 -8.293722651 7.36265568 0.98962236 0.803702922 0.445256791 0.082281617 0.276944782 51.09831159 0.086118696 0.023386135 5.08E-09 8.293722651 -0.185919437 VS(ph)PENLVDK ddPTM_A459_MK2206_30min_R2 2 VSPENLVDK 9 0 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KS29;J3QKP0 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 VS(1)PENLVDK;VS(1)PENLVDK 119.39 0.0069134 75137000 145609 179230 165672 159935 147904 127627 200279 130202 125196 183240 TRUE FALSE 156756.937 170329.6988 171195.4218 146867.7989 142096.5458 132483.9349 173982.1267 147219.8485 136085.3218 177260.8938 0.884328933 0.960898341 0.965782233 0.828540327 0.801623769 0.747395165 0.981503156 0.83052638 0.767712037 1 17.43551477 -5.765748975 24.99893715 0.843039616 0.939392693 0.188251006 0.080562913 157.5943934 914175.0159 0.022218722 0.034285409 1.71E-06 5.765748975 0.096353077 VS(ph)PFGLR ddPTM_A459_MK2206_30min_R2 1 VSPFGLR 7 0 J3KNZ9;H3BRE6 J3KNZ9 FBRS 1 VS(1)PFGLR 80.219 0.0453 15813000 17161 50528 27573 80927 62288 120650 36107 35061 67568 25785 TRUE FALSE 18474.85935 48018.85299 28492.27006 74315.00523 59842.26015 125241.4203 31366.10753 39643.59308 73444.94251 24943.63756 0.7406642 1.92509424 1.142266038 2.979317072 2.399099169 5.020976591 1.257479285 1.589326857 2.944435924 1 14.60638425 -5.754041399 24.99857004 2.53494946 1.334916498 0.192216404 1.103842888 286.7045385 968794.3774 0.304165082 0.513572474 1.76E-06 5.754041399 -1.200032962 VS(ph)PGLPSPNLENGAPAVGPVQPR ddPTM_A459_MK2206_30min_R2 1 VSPGLPSPNLENGAPAVGPVQPR 23 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 VS(0.966)PGLPS(0.034)PNLENGAPAVGPVQPR 132.52 6.95E-06 35561000 8135.8 7387.3 9233.9 9873.5 10147 9390.4 10422 10159 8794.9 8712.9 TRUE FALSE 8758.683103 7020.457424 9541.753617 9066.803466 9748.577795 9747.758252 9053.578881 11486.81618 9559.864504 8428.598787 1.039162419 0.832932923 1.132068789 1.075718954 1.156607171 1.156509937 1.07414994 1.362838174 1.134217531 1 13.04107709 -5.34395666 7.31972834 1.147272542 0.936835404 0.387224104 0.100197366 0.22896537 17.65022694 0.025713332 0.053988129 4.53E-06 5.34395666 -0.210437138 VS(ph)PGQAAPAMAR ddPTM_A459_MK2206_30min_R2 1 VSPGQAAPAMAR 12 0 Q96HA7-2;Q96HA7 Q96HA7-2 TONSL Tonsoku-like protein 1 VS(1)PGQAAPAMAR 91.712 0.022664 19377000 82175 81897 82744 86760 74047 61454 93789 81101 59500 102570 TRUE FALSE 88466.38118 77830.11407 85502.64366 79671.43047 71139.54272 63792.67503 81474.39164 91701.17916 64675.20245 99223.1493 0.891590136 0.784394717 0.86172072 0.802952043 0.716965176 0.642921289 0.821122815 0.924191379 0.651815659 1 16.59838913 -10.37878477 12.1957351 0.999995319 0.789626189 0.33252872 0.089829135 0 0 0.088276907 0.021410295 4.18E-11 10.37878477 -0.21036913 VS(ph)PGQAAPAMARPR ddPTM_A459_MK2206_30min_R1 1 VSPGQAAPAMARPR 14 1 Q96HA7-2;Q96HA7 Q96HA7-2 TONSL Tonsoku-like protein 1 VS(1)PGQAAPAMARPR 74.726 0.025164 3335100 538.51 612.81 804 551.8 635.33 818.59 690.72 474.2 492.7 567.63 TRUE FALSE 492.7068967 572.9159576 749.4267201 594.2997316 610.0234608 864.9378584 644.6433291 470.0541194 543.9179281 637.9522898 0.772325618 0.898054552 1.174737879 0.931573945 0.956221132 1.355803361 1.010488307 0.736817042 0.852599696 1 9.317304724 -7.669603473 8.737546903 0.84657821 1.024333035 0.151200236 0.161520796 0.454385674 38.43998684 0.079376389 0.045646351 2.14E-08 7.669603473 0.177754824 VS(ph)PGQAAPAMARPR ddPTM_A459_MK2206_30min_R2 3 VSPGQAAPAMARPR 14 1 Q96HA7-2;Q96HA7 Q96HA7-2 TONSL Tonsoku-like protein 1 VS(1)PGQAAPAMARPR;VS(1)PGQAAPAMARPR;VS(1)PGQAAPAMARPR 98.408 0.0057275 9911100 13272.8 17964.7 13050.4 17620.9 21414.6 24231.6 17941.7 15953.5 18756.4 18080.9 TRUE FALSE 14288.97577 17072.59912 13485.49382 16181.2161 20573.7552 25153.75052 15585.93324 18038.67723 20387.79777 17490.92171 0.816936695 0.976083445 0.77099961 0.925120835 1.176253347 1.438103202 0.891087016 1.031316561 1.165621692 1 14.0943187 -6.141595314 4.762403683 1.122556924 0.86473657 0.41594105 0.143330115 0.240173508 8.342923441 0.044626642 0.058498044 7.22E-07 6.141595314 -0.257820354 VS(ph)PLTFGR ddPTM_A459_MK2206_30min_R1 4 VSPLTFGR 8 0 O95810 O95810 SDPR Serum deprivation-response protein 1 VS(0.999)PLT(0.001)FGR;VS(0.997)PLT(0.003)FGR;VS(1)PLTFGR;VS(1)PLTFGR 147.73 0.0016673 45353600 6804.9 8399.2 7472.5 5634.6 6732.4 6516.6 7980.9 5821.8 8514.5 9807.6 TRUE FALSE 6226.107521 7852.410553 6965.28752 6068.577868 6464.234252 6885.56426 7448.508723 5770.900616 9399.612744 11022.63953 0.56484724 0.712389308 0.631907403 0.550555777 0.586450662 0.62467472 0.675746377 0.52354979 0.852755161 1 13.42818212 -8.462346967 4.014802338 0.998104628 0.613915067 0.849450801 0.055055211 0.068498257 2.211330264 0.052768037 0.013846397 3.45E-09 8.462346967 -0.384189561 VS(ph)PLTFGR ddPTM_A459_MK2206_30min_R2 4 VSPLTFGR 8 0 O95810 O95810 SDPR Serum deprivation-response protein 1 VS(0.996)PLT(0.004)FGR;VS(1)PLTFGR;VS(0.986)PLT(0.014)FGR;VS(1)PLTFGR 128.35 0.0043517 55615200 56070 47689.4 50495.5 50925.1 40874.2 41194 54354 48319.3 32330.4 61006 TRUE FALSE 60362.76231 45321.21374 52178.99477 46764.35643 39269.27353 42761.66654 47217.25451 54634.79841 35142.43975 59015.37922 1.02283105 0.767955986 0.884159273 0.792409657 0.665407459 0.724585135 0.800083896 0.925772216 0.595479352 1 15.84880334 VS(ph)PPAPGSAPET(ph)PEDK ddPTM_A459_MK2206_30min_R2 1 VSPPAPGSAPETPEDK 16 0 M0R300;M0R0P8;Q13459-2;Q13459 M0R300 MYO9B Unconventional myosin-IXb 2 VS(0.996)PPAPGS(0.008)APET(0.996)PEDK 134.93 0.0050649 0 23266 27049 17459 20318 23728 17495 23758 15453 13670 25457 TRUE FALSE 25047.26285 25705.78599 18041.07435 18657.95441 22796.3195 18160.78448 20638.54606 17472.76016 14858.99189 24626.34017 1.017092376 1.043832978 0.732592591 0.757642194 0.925688484 0.737453651 0.838067935 0.709515098 0.603378 1 14.58791462 -5.256436034 24.93175713 0.781477899 1.030462708 0.451299052 0.106725273 333.3467998 1661058.01 0.026752844 0.06634776 5.54E-06 5.256436034 0.248984809 VS(ph)PPASPTLEVELGSAELPLQGAVGPELPPGGGHGR ddPTM_A459_MK2206_30min_R1 2 VSPPASPTLEVELGSAELPLQGAVGPELPPGGGHGR 36 0 Q7Z6J0 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 1 VS(0.989)PPAS(0.01)PT(0.001)LEVELGSAELPLQGAVGPELPPGGGHGR;VS(0.887)PPAS(0.095)PT(0.019)LEVELGSAELPLQGAVGPELPPGGGHGR 142.98 3.35E-35 11566900 1154.44 1228.22 1169.82 1041.02 1445.4 1417.07 1544.88 1448.59 1388.58 1456.23 TRUE FALSE 1056.248816 1148.262655 1090.415878 1121.199541 1387.826657 1497.303279 1441.823874 1435.92513 1532.92786 1636.638766 0.645376877 0.701598104 0.666253238 0.685062314 0.847973717 0.91486485 0.880966468 0.877362287 0.936631767 1 10.67652021 -6.355814761 2.610553672 0.911506233 0.671910175 0.916782679 0.035207774 0.076107142 1.012969924 0.011433184 0.01354744 4.41E-07 6.355814761 -0.239596058 VS(ph)PPASPTLEVELGSAELPLQGAVGPELPPGGGHGR ddPTM_A459_MK2206_30min_R2 2 VSPPASPTLEVELGSAELPLQGAVGPELPPGGGHGR 36 0 Q7Z6J0 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 1 VS(0.908)PPAS(0.071)PT(0.021)LEVELGSAELPLQGAVGPELPPGGGHGR;VS(0.991)PPAS(0.008)PT(0.001)LEVELGSAELPLQGAVGPELPPGGGHGR 142.05 4.64E-35 10764200 7772.2 12513 10803.1 11416.4 12730.9 10033.2 14708.9 8983.6 11007 15384.8 TRUE FALSE 8367.245608 11891.62262 11163.26996 10483.6436 12231.0209 10415.02046 12777.60376 10157.78737 11964.36896 14882.79524 0.562209281 0.799018089 0.750078852 0.704413615 0.82182283 0.699802711 0.85854865 0.682518788 0.803906039 1 13.86135789 -14.52287875 0.168509982 1.97218599 0.685905152 0.538335701 0.076221504 104.3404752 0.977523017 33.95009106 0.267761266 3.00E-15 14.52287875 -1.286280838 VS(ph)PQDANPLMANGTLTR ddPTM_A459_MK2206_30min_R1 1 VSPQDANPLMANGTLTR 17 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6 O60716-5 CTNND1 Catenin delta-1 1 VS(1)PQDANPLMANGTLTR 101.28 0.0040491 4160000 975.52 1050.2 860.47 781.2 1025.1 912.31 850.29 1004.9 678.84 735.08 TRUE FALSE 892.5469013 981.8317891 802.0636938 841.3681594 984.2680963 963.9642038 793.5687055 996.1142652 749.4078473 826.14726 1.080372646 1.188446463 0.970848337 1.018423954 1.191395462 1.16681886 0.960565681 1.205734514 0.907111702 1 9.690255153 -8.278681643 24.82753446 0.953555837 1.094810555 0.295212323 0.089068213 1105.871814 1592353.846 0.083571033 0.021791143 5.26E-09 8.278681643 0.141254718 VS(ph)PQDANPLMANGTLTR ddPTM_A459_MK2206_30min_R2 2 VSPQDANPLMANGTLTR 17 0 O60716-5;O60716-3;A0A669KB05;O60716;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716-4;O60716-6 O60716-5 CTNND1 Catenin delta-1 1 VS(1)PQDANPLMANGTLTR;VS(0.999)PQDANPLMANGTLTR 90.581 0.0089034 6477800 10535.4 10384.2 7546.6 10633.4 10280.2 10600.6 7906.4 7714.7 8674.6 9210.9 TRUE FALSE 11341.99832 9868.535728 7798.199877 9764.617205 9876.547694 11004.01326 6868.280183 8723.037779 9429.101028 8910.349087 1.27290168 1.107536375 0.875184552 1.095873698 1.10843555 1.234969938 0.77082055 0.97897823 1.058219037 1 13.12126624 -4.873155962 3.741163611 1.018366474 1.277566367 0.295149408 0.121326703 0.314936581 7.420042241 0.031726598 0.188906367 1.34E-05 4.873155962 0.259199893 VS(ph)PQPMISR ddPTM_A459_MK2206_30min_R2 1 VSPQPMISR 9 0 Q9P270;D6RIF6 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 VS(1)PQPMISR 82.505 0.04117 21428000 16638 13304 10689 13875 13391 11980 15882 12433 10507 16091 TRUE FALSE 17911.81807 12643.34271 11045.36593 12741.36812 12865.20206 12435.90729 13796.67432 14058.03579 11420.87987 15565.95199 1.150704954 0.81224346 0.709584993 0.818540885 0.826496321 0.798917233 0.886336687 0.903127274 0.733709051 1 13.92610619 -10.36651281 15.09962695 0.99999057 0.843359697 0.131810383 0.115604034 0 0 0.11033697 0.026760646 4.30E-11 10.36651281 -0.156630873 VS(ph)PSDTTPLVSR ddPTM_A459_MK2206_30min_R1 2 VSPSDTTPLVSR 12 0 Q9HCK8-2;Q9HCK8;H0YJG4 Q9HCK8-2 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 VS(0.996)PS(0.004)DTTPLVSR;VS(1)PSDTTPLVSR 183.06 0.00010427 104206000 2744.5 2725.2 2663.3 1994.97 2367.1 2270.9 2807.8 2092.35 2825.9 2613.5 TRUE FALSE 2511.065863 2547.788985 2482.522616 2148.622935 2272.813395 2399.476396 2620.496785 2074.056805 3119.662418 2937.280111 0.854894926 0.86739735 0.845177349 0.731500863 0.773781631 0.816904178 0.892150795 0.706114748 1.062092242 1 11.52026514 -8.274059298 24.99180824 1.031046167 0.813022589 0.69765692 0.057933449 480.9345835 952406.9942 0.054908799 0.014560723 5.32E-09 8.274059298 -0.218023578 VS(ph)PSDTTPLVSR ddPTM_A459_MK2206_30min_R2 3 VSPSDTTPLVSR 12 0 Q9HCK8-2;Q9HCK8;H0YJG4 Q9HCK8-2 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 VS(1)PSDTTPLVSR;VS(0.689)PS(0.311)DTTPLVSR;VS(1)PSDTTPLVSR 182.25 0.00010418 163939000 156513 179511 162386 171356 176823 169483 204226 141641 146622 182320 TRUE FALSE 168495.7556 170596.7448 167799.8682 157355.6667 169880.0406 175932.7943 177410.8809 160153.965 159374.9165 176370.9133 0.955348886 0.96726122 0.951403296 0.89218604 0.963197601 0.997515923 1.00589648 0.908052025 0.903634922 1 17.42825313 -5.296183456 17.73003809 0.951160897 0.961304904 0.006324972 0.039167653 138.654514 70755.9568 0.011056153 0.023030841 5.06E-06 5.296183456 0.010144007 VS(ph)PSFSAELK ddPTM_A459_MK2206_30min_R2 2 VSPSFSAELK 10 0 Q13416 Q13416 ORC2 Origin recognition complex subunit 2 1 VS(1)PSFSAELK;VS(0.985)PS(0.015)FSAELK 167.18 0.00030377 11751800 40684 45745 38573 44882 46266 32907 46725 34407 34412 40011 TRUE FALSE 43798.79832 43473.36982 39859.00457 41214.99703 44449.36437 34159.29894 40589.95137 38904.11304 37405.09356 38705.44435 1.131592701 1.123184879 1.029803565 1.064837201 1.148400829 0.882545066 1.048688422 1.005132836 0.966403931 1 15.24024889 -6.744684113 24.99999935 0.98513322 1.095071284 0.57822655 0.050673101 194.5449218 290273.6682 0.016823659 0.016779891 1.80E-07 6.744684113 0.109938063 VS(ph)PSPSQESLSSSK ddPTM_A459_MK2206_30min_R2 1 VSPSPSQESLSSSK 14 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83;Q5JSH3-3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 VS(0.997)PS(0.003)PSQESLSSSK 116.58 0.003459 0 12731 8757.2 11358 10179 9672 5899.5 10640 5240 7702.8 7534.8 TRUE FALSE 13705.69515 8322.330182 11736.67005 9347.343139 9292.228682 6124.009606 9242.955219 5924.885992 8372.775621 7288.940093 1.880341308 1.141775083 1.610202567 1.282400873 1.274839492 0.840178343 1.26807946 0.812859746 1.148695903 1 12.83149333 -1.522878745 0.290728515 0.955119105 7.212898563 0.554395407 0.20755977 39.48645845 0.560541534 0.209939097 127.1351499 0.03 1.522878745 6.257779459 VS(ph)PSTSYTPSR ddPTM_A459_MK2206_30min_R1 1 VSPSTSYTPSR 11 0 Q9BTE3;Q9BTE3-2 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 1 VS(0.809)PS(0.125)T(0.027)S(0.027)YT(0.011)PSR 93.623 0.023338 16556000 857.88 821.03 1062.9 796.42 1016.9 983.44 988.94 904.37 705.4 758.34 TRUE FALSE 784.9128011 767.5807978 990.7533094 857.7604064 976.3947197 1039.121523 922.969617 896.4631884 778.7288543 852.2888844 0.920946894 0.900611063 1.162461845 1.006419797 1.145614753 1.219212807 1.082930487 1.051830201 0.913691201 1 9.735198706 -5.245428723 24.51591982 1.080446118 0.91077893 0.368903593 0.084273498 663.4836645 1015937.289 0.022179648 0.058249705 5.68E-06 5.245428723 -0.169667188 VS(ph)PSTSYTPSR ddPTM_A459_MK2206_30min_R2 4 VSPSTSYTPSR 11 0 Q9BTE3;Q9BTE3-2 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 1 VS(0.644)PS(0.348)T(0.002)S(0.002)YT(0.004)PSR;VS(0.947)PS(0.052)TSYTPSR;VS(0.973)PS(0.026)TSYTPSR;VS(0.981)PS(0.016)T(0.001)S(0.001)YT(0.002)PSR 124.21 0.0036397 334208000 180338 240954 199942 254462 264444 230026 240410 173730 228853 224672 TRUE FALSE 194144.8159 228988.5747 206607.9665 233671.6406 254060.5998 238779.8006 208843.8782 196437.1075 248758.2203 217340.971 0.893272976 1.053591385 0.950616745 1.075138477 1.16894941 1.098641455 0.960904321 0.903819959 1.144552815 1 17.72960064 -4.011698313 1.552914512 1.041135952 1.70E-11 0.213203885 0.082292561 18.54083356 7.019470186 0.02422687 52.46637107 9.73E-05 4.011698313 -1.041135952 VS(ph)SGYVPPPVATPFSSK ddPTM_A459_MK2206_30min_R1 1 VSSGYVPPPVATPFSSK 17 0 Q15942;Q15942-2;H7C3R3 Q15942 ZYX Zyxin 1 VS(0.906)S(0.094)GYVPPPVATPFSSK 164.93 3.39E-06 13989000 5643.3 6432.2 5584.6 5570.4 5546.8 4976.6 4669.5 5604.9 4172.2 3743.2 TRUE FALSE 5163.307701 6013.462611 5205.532912 5999.433173 5325.85921 5258.370791 4358.006175 5555.89695 4605.91512 4206.935876 1.227332161 1.429416276 1.237369208 1.42608144 1.265971093 1.249928914 1.035909817 1.320651684 1.094838442 1 12.03855411 -6.900362777 2.431286744 1.139260477 1.328789747 0.451782274 0.103924898 0.281677201 3.385044615 0.039306509 0.03333826 1.26E-07 6.900362777 0.189529269 VS(ph)SPPNAMMSSR ddPTM_A459_MK2206_30min_R1 1 VSSPPNAMMSSR 12 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VS(0.896)S(0.104)PPNAMMSSR 142.39 0.00091249 43155000 3508.9 3395.4 3042.6 2657.9 3275.8 3479.2 3165.2 3143.1 2898.5 2334 TRUE FALSE 3210.449629 3174.358843 2836.076789 2862.611919 3145.317949 3676.189297 2954.055283 3115.620208 3199.809447 2623.153541 1.22388933 1.210130781 1.081170715 1.091286451 1.199059796 1.401438856 1.12614654 1.187738407 1.219833074 1 11.35708654 -10.86003079 5.297090535 0.999940911 1.191736865 0.3159879 0.08533657 6.31E-05 7.90E-06 0.087535686 0.021223992 1.38E-11 10.86003079 0.191795954 VS(ph)SPPNAMMSSR ddPTM_A459_MK2206_30min_R2 1 VSSPPNAMMSSR 12 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VS(0.5)S(0.5)PPNAMMSSR 140.33 0.0010841 42648000 86659 164860 128950 146080 149400 141020 152210 105290 138620 151220 TRUE FALSE 93293.67967 156673.2921 133249.1286 134144.7967 143533.8053 146386.6149 132224.6442 119051.7645 150676.917 146285.7038 0.637749809 1.07100891 0.910882781 0.917005512 0.981188193 1.000689822 0.903879468 0.81383048 1.030018061 1 17.15842926 -4.74730462 24.99727048 0.950405804 0.637749015 0.646702427 0.070932395 477.8422823 845014.2045 0.017474871 0.362705934 1.79E-05 4.74730462 -0.312656789 VS(ph)SPSPATDGK ddPTM_A459_MK2206_30min_R1 2 VSSPSPATDGK 11 0 A0A0A0MQS0;F8W9L8;A8MW92-4;A8MW92 A0A0A0MQS0 PHF20L1 PHD finger protein 20-like protein 1 1 VS(0.613)S(0.386)PS(0.001)PATDGK;VS(0.827)S(0.169)PS(0.004)PATDGK 144.1 0.00078455 25987000 17727.7 18017.4 15404.3 12011.3 11882.2 8962.7 11532.4 10601.9 10148.2 12239.8 TRUE FALSE 16219.86602 16844.46399 14358.69903 12936.41241 11408.90681 9470.160329 10763.09464 10509.20871 11203.14171 13756.15883 1.179098484 1.224503453 1.043801486 0.94040877 0.829367191 0.688430575 0.782420062 0.763963897 0.814409156 1 13.74779006 -5.744897924 1.473574433 0.792025142 1.210695032 0.795051742 0.078126674 0.163992685 0.715275712 0.024749938 0.058481867 1.80E-06 5.744897924 0.41866989 VS(ph)SPSPELGTTPASIFR ddPTM_A459_MK2206_30min_R1 1 VSSPSPELGTTPASIFR 17 0 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 VS(0.5)S(0.5)PSPELGTTPASIFR 230.96 1.89E-16 10382000 959.93 1133.2 1169.2 831.77 1070.3 867.59 1034.6 1051 877.98 747.23 TRUE FALSE 878.2829127 1059.428474 1089.837962 895.8330695 1027.667685 916.712196 965.5837217 1041.811218 969.2491629 839.8024937 1.045820796 1.261520991 1.297731276 1.066718754 1.223701635 1.091580703 1.149774773 1.240543134 1.15413942 1 9.713906262 -8.563377817 21.14971866 0.999999998 1.175558962 0.286954701 0.080778438 3434.448546 1793560.885 0.076400138 0.019726431 2.73E-09 8.563377817 0.175558964 VS(ph)SPSPELGTTPASIFR ddPTM_A459_MK2206_30min_R2 2 VSSPSPELGTTPASIFR 17 0 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 VS(0.587)S(0.398)PS(0.015)PELGTTPASIFR;VS(0.656)S(0.337)PS(0.006)PELGTTPASIFR 136.57 0.00051366 17406900 18820.8 25171.5 24041.2 27653 25212.2 22524.2 25529.9 18094.2 24467.7 22774.2 TRUE FALSE 20261.73492 23921.51991 24842.72161 25393.66144 24222.24235 23381.37421 22177.79346 20459.17407 26595.85632 22031.07972 0.919688693 1.085807878 1.127621611 1.152629003 1.099457796 1.061290437 1.006659399 0.928650539 1.207197135 1 14.42725258 -7.023440588 5.641740869 1.029936746 1.084315587 0.042494317 0.08774977 0.528056554 53.36960568 0.033234505 0.026805726 9.47E-08 7.023440588 0.054378842 VS(ph)SPTVNTTLR ddPTM_A459_MK2206_30min_R2 1 VSSPTVNTTLR 11 0 Q9NSK0-5;Q9NSK0;Q9NSK0-3 Q9NSK0-5 KLC4 Kinesin light chain 4 1 VS(0.459)S(0.459)PT(0.082)VNTTLR 122.18 0.0042268 16689000 45460 62785 54608 66244 55863 53122 58777 55165 47245 68744 TRUE FALSE 48940.45255 59667.1882 56428.60346 60831.6533 53669.53793 55143.59493 51059.5093 62375.25491 51354.2847 66500.88891 0.735936818 0.897238957 0.848539086 0.914749476 0.807049933 0.829215907 0.767801907 0.93796122 0.77223456 1 16.021086 -11.64914316 2.354552299 1.318806621 0.839257061 0.377526722 0.063482853 5820647.302 1454890.877 9930224.887 0.014976913 2.24E-12 11.64914316 -0.479549561 VS(ph)SPVFGATSSIK ddPTM_A459_MK2206_30min_R1 1 VSSPVFGATSSIK 13 0 F6Q6H0;I6L8A6;Q99708-3;Q99708;Q99708-2 F6Q6H0 RBBP8 DNA endonuclease RBBP8 1 VS(0.5)S(0.5)PVFGATSSIK 143.56 0.00071582 47186000 5455.5 5908.8 5821.8 5077 5198.1 4635.3 5357 5524.9 4623.9 4935.4 TRUE FALSE 4991.481077 5524.136046 5426.632436 5468.03142 4991.04867 4897.74668 4999.644304 5476.596382 5104.570952 5546.834612 0.899879197 0.995907834 0.978329591 0.985793124 0.899801241 0.882980479 0.901350888 0.987337241 0.920267379 1 12.43744899 -1.522932498 10.40895318 0.944067815 2.14E-05 0 0.045428992 0 0 0.010822266 0 0.029996287 1.522932498 -0.944046376 VS(ph)SPVFGATSSIK ddPTM_A459_MK2206_30min_R2 2 VSSPVFGATSSIK 13 0 F6Q6H0;I6L8A6;Q99708-3;Q99708;Q99708-2 F6Q6H0 RBBP8 DNA endonuclease RBBP8 1 VS(0.5)S(0.5)PVFGATSSIK;VS(0.839)S(0.161)PVFGATSSIK 228.17 5.83E-13 74175000 259490 330160 258580 293040 277880 243780 310810 262530 244740 283730 TRUE FALSE 279356.7539 313764.7345 267200.9281 269097.6946 266969.035 253057.2187 270000.2737 296843.5724 266027.0428 274471.9133 1.017797233 1.143157894 0.973509183 0.980419786 0.972664313 0.921978557 0.983708207 1.081508009 0.969232296 1 18.066299 -5.282212735 24.93888309 0.985333564 1.080477569 0.397616073 0.046821469 683.0478096 820013.5349 0.01249051 0.026051728 5.22E-06 5.282212735 0.095144006 VS(ph)SQAEDTSSSFDNLFIDR ddPTM_A459_MK2206_30min_R2 1 VSSQAEDTSSSFDNLFIDR 19 0 H8Y6P7;P0CAP2-3;P0CAP2;Q9BZD3 H8Y6P7 GCOM1;POLR2M;GCOM2 DNA-directed RNA polymerase II subunit GRINL1A;Putative GRINL1B complex locus protein 2 1 VS(0.832)S(0.168)QAEDTSSSFDNLFIDR 156.08 3.33E-06 3513400 11859 12347 12853 11748 9614.6 13049 8977.9 8835.6 10598 10215 TRUE FALSE 12766.93416 11733.86593 13281.5126 10788.15082 9237.082495 13545.58884 7799.090946 9990.443257 11519.79488 9881.685387 1.29197942 1.187435693 1.344053376 1.091731865 0.93476792 1.370777181 0.78924704 1.011006004 1.165772278 1 13.27054141 -5.883353465 5.852169379 1.04639181 1.264362557 0.328797977 0.146573288 0.250644774 11.85278846 0.040767954 0.061271063 1.31E-06 5.883353465 0.217970747 VS(ph)VDNEDSYMLVMRNMFS(ph)HRLPVHRK ddPTM_A459_MK2206_30min_R2 1 VSVDNEDSYMLVMRNMFSHRLPVHRK 26 3 H0YIJ6;Q8TBX8-2;Q8TBX8-3;Q8TBX8 H0YIJ6 PIP4K2C Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma 2 VS(0.882)VDNEDS(0.074)Y(0.079)MLVMRNMFS(0.964)HRLPVHRK 45.395 0.020072 3327600 5720.1 5939.8 6494.3 9052.2 8133.4 8576.4 7802.6 6688.2 7141.3 8573.9 TRUE FALSE 6158.035254 5644.838169 6710.816721 8312.606303 7814.041849 8902.780912 6778.109247 7562.370704 7762.437365 8294.134345 0.742456656 0.680581955 0.809103933 1.002227111 0.942116624 1.073382772 0.8172172 0.911773356 0.935894819 1 13.0178757 -5.564433976 4.091093023 0.949117059 0.715888014 0.700007405 0.065052733 0.115307085 4.159935406 0.018344386 0.034747242 2.73E-06 5.564433976 -0.233229046 VS(ph)VSPGR ddPTM_A459_MK2206_30min_R2 1 VSVSPGR 7 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VS(0.5)VS(0.5)PGR 83.647 0.038904 414770000 95975 122950 90032 108780 107800 109790 106810 87006 102800 108800 TRUE FALSE 103322.9198 116844.4818 93033.62194 99892.32603 103567.2303 113968.1354 92785.7187 98377.98294 111741.3582 105249.8649 0.981691709 1.110162772 0.883931034 0.949096952 0.984012953 1.08283403 0.881575656 0.934708876 1.061676975 1 16.68345886 -5.251016554 24.97524851 0.970204923 1.045927226 0.154472963 0.068838304 1286.94001 3083759.491 0.017436221 0.045025664 5.61E-06 5.251016554 0.075722303 VSAEAEVAPVS(ph)PEVT(ph)QEVVEEHCASPEDK ddPTM_A459_MK2206_30min_R2 1 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VSAEAEVAPVS(0.853)PEVT(0.853)QEVVEEHCAS(0.294)PEDK 55.994 0.013058 1919100 16217 13962 11605 15163 12212 8660.7 16374 12608 11903 16558 TRUE FALSE 17458.58599 13268.66738 11991.90491 13924.1344 11732.49552 8990.289007 14224.07413 14255.90889 12938.30142 16017.71382 1.08995492 0.828374607 0.748665199 0.86929599 0.732470043 0.561271672 0.888021493 0.890008965 0.807749569 1 13.96738063 -10.74714465 14.89150579 0.999997628 0.816633693 0.142344053 0.128486472 0 0 0.128190648 0.031090799 1.79E-11 10.74714465 -0.183363935 VSAEAEVAPVS(ph)PEVTQEVVEEHCAS(ph)PEDK ddPTM_A459_MK2206_30min_R1 5 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VSAEAEVAPVS(0.997)PEVT(0.003)QEVVEEHCAS(1)PEDK;VSAEAEVAPVS(0.999)PEVT(0.001)QEVVEEHCAS(1)PEDK;VSAEAEVAPVS(0.941)PEVT(0.163)QEVVEEHCAS(0.896)PEDK;VSAEAEVAPVS(1)PEVTQEVVEEHCAS(1)PEDK;VSAEAEVAPVS(0.978)PEVT(0.022)QEVVEEHCAS(1)PEDK 136.62 2.80E-13 245233400 13495 17006.6 15889.3 13008 9745.9 10008.38 11480.4 10722.51 13982.63 14865.8 TRUE FALSE 12347.17938 15899.46725 14810.77859 14009.87841 9357.700166 10575.04583 10714.56346 10628.76423 15436.17443 16707.48754 0.739020715 0.951637235 0.886475513 0.838538912 0.560090208 0.632952489 0.641303095 0.636167718 0.923907583 1 14.02820718 -6.030778574 21.72882127 0.704196036 0.867337759 0.136823704 0.139332902 194.870873 137573.3811 0.03992446 0.051659489 9.32E-07 6.030778574 0.163141723 VSAEAEVAPVS(ph)PEVTQEVVEEHCAS(ph)PEDK ddPTM_A459_MK2206_30min_R2 4 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VSAEAEVAPVS(0.86)PEVT(0.14)QEVVEEHCAS(0.999)PEDK;VSAEAEVAPVS(0.99)PEVT(0.043)QEVVEEHCAS(0.967)PEDK;VSAEAEVAPVS(1)PEVTQEVVEEHCAS(1)PEDK;VSAEAEVAPVS(0.993)PEVT(0.008)QEVVEEHCAS(1)PEDK 103.46 8.62E-08 84887200 184544 165108.8 156503.8 164411.5 155584.5 119870.9 200454.8 144861.7 114455.4 200678.6 TRUE FALSE 198672.8305 156909.7371 161721.5586 150978.5545 149475.4708 124432.6711 174134.844 163795.6216 124410.5238 194130.4737 1.023398474 0.80826948 0.833056014 0.777716922 0.769974275 0.640974437 0.896999016 0.843739875 0.640860352 1 17.56666708 -3.980599811 1.484762199 0.788838491 2.534023337 0.288591115 0.102915008 13.19076257 4.488106306 0.02760143 60.08312704 0.000104568 3.980599811 1.745184846 VSAEAEVAPVS(ph)PEVTQEVVEEHCASPEDK ddPTM_A459_MK2206_30min_R1 5 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VSAEAEVAPVS(0.984)PEVT(0.016)QEVVEEHCASPEDK;VSAEAEVAPVS(0.999)PEVT(0.001)QEVVEEHCASPEDK;VSAEAEVAPVS(0.999)PEVT(0.001)QEVVEEHCASPEDK;VSAEAEVAPVS(0.991)PEVT(0.009)QEVVEEHCASPEDK;VSAEAEVAPVS(1)PEVTQEVVEEHCASPEDK 176.53 6.37E-28 1667923000 26137.2 27181.3 25216.4 24042.3 21562 21037.7 21684.2 22079.2 21988.7 21523.1 TRUE FALSE 23914.09389 25411.79243 23504.78102 25894.04211 20703.13988 22228.83639 20237.68658 21886.16388 24274.50405 24189.54412 0.988612839 1.05052796 0.971691773 1.070464246 0.855871437 0.918943998 0.836629516 0.904777857 1.003512259 1 14.56209596 -6.260264977 24.99844124 0.910977828 1.019007871 0.425677726 0.056531235 96.3611678 2051147.07 0.016684521 0.020367716 5.49E-07 6.260264977 0.108030042 VSAEAEVAPVS(ph)PEVTQEVVEEHCASPEDK ddPTM_A459_MK2206_30min_R2 5 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VSAEAEVAPVS(0.959)PEVT(0.041)QEVVEEHCASPEDK;VSAEAEVAPVS(0.981)PEVT(0.019)QEVVEEHCASPEDK;VSAEAEVAPVS(0.659)PEVT(0.341)QEVVEEHCASPEDK;VSAEAEVAPVS(0.835)PEVT(0.165)QEVVEEHCASPEDK;VSAEAEVAPVS(0.994)PEVT(0.006)QEVVEEHCASPEDK 128.25 7.53E-14 616490300 347672 455811 379068.2 421561 420799 316805 446478 351875 354054 412403 TRUE FALSE 374290.0356 433176.0886 391706.1446 387118.1178 404276.3169 328861.2363 387854.9023 397866.2707 384848.9769 398946.3239 0.938196477 1.085800426 0.981851746 0.970351385 1.013360176 0.824324518 0.972198211 0.997292736 0.96466355 1 18.60583513 -4.462470347 22.92692221 0.976850114 0.000274755 0.037131421 0.061366467 1306.603813 835927.6962 0.015234229 44360.32177 3.45E-05 4.462470347 -0.976575359 VSAEAEVAPVSPEVT(ph)QEVVEEHCASPEDK ddPTM_A459_MK2206_30min_R1 5 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VSAEAEVAPVS(0.186)PEVT(0.814)QEVVEEHCASPEDK;VSAEAEVAPVS(0.008)PEVT(0.992)QEVVEEHCASPEDK;VSAEAEVAPVS(0.004)PEVT(0.996)QEVVEEHCASPEDK;VSAEAEVAPVS(0.001)PEVT(0.999)QEVVEEHCASPEDK;VSAEAEVAPVS(0.032)PEVT(0.968)QEVVEEHCASPEDK 179.5 8.75E-28 536546300 14036.73 16007.17 14876.3 12534.05 10955.16 10824.38 12191.18 11056.99 12338.65 13666 TRUE FALSE 12842.8324 14965.10032 13866.5382 13499.4247 10518.79278 11437.24704 11377.92863 10960.3199 13621.29682 15359.04725 0.836173767 0.974350822 0.902825415 0.878923313 0.684859719 0.744658627 0.740796512 0.713606757 0.886858188 1 13.90680111 -6.074073497 7.204729219 0.775630656 0.908239324 0.214059465 0.093048411 0.317441692 26.91064445 0.026180743 0.034046652 8.43E-07 6.074073497 0.132608668 VSAEAEVAPVSPEVT(ph)QEVVEEHCASPEDK ddPTM_A459_MK2206_30min_R2 2 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VSAEAEVAPVS(0.015)PEVT(0.884)QEVVEEHCAS(0.101)PEDK;VSAEAEVAPVS(0.004)PEVT(0.979)QEVVEEHCAS(0.017)PEDK 101.85 7.35E-08 87078900 93056 103642 99951 97573 93335 74566 120059 89567 75999 119786 TRUE FALSE 100180.4389 98495.28899 103283.3165 89600.97378 89670.19893 77403.66138 104295.1091 101273.7144 82609.25565 115877.3926 0.864538256 0.84999573 0.891315503 0.773239471 0.773836871 0.66797897 0.900047082 0.873973017 0.712902265 1 16.8222396 -10.33645094 10.59235403 1 0.813349063 0.363731128 0.074582775 0 0 0.074646929 0.018104539 4.61E-11 10.33645094 -0.186650937 VSAEAEVAPVSPEVTQEVVEEHCAS(ph)PEDK ddPTM_A459_MK2206_30min_R1 1 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VSAEAEVAPVSPEVTQEVVEEHCAS(1)PEDK 130.45 6.88E-14 55584000 5400.4 6181.6 5672.6 4858.7 4171.5 3903.3 5087.4 4299.9 6110.1 6126.9 TRUE FALSE 4941.067621 5779.176716 5287.559717 5232.917916 4005.340322 4124.301473 4748.028828 4262.306428 6745.26676 6885.946628 0.717558222 0.839271204 0.767876953 0.75994169 0.581668801 0.598944734 0.689524489 0.618986271 0.979570003 1 12.74943928 -8.272916932 24.13836304 0.989785154 0.698618168 0.69977579 0.076774955 323.8570034 681090.1314 0.080984429 0.021702168 5.33E-09 8.272916932 -0.291166987 VSAEAEVAPVSPEVTQEVVEEHCAS(ph)PEDK ddPTM_A459_MK2206_30min_R2 4 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VSAEAEVAPVS(0.011)PEVT(0.16)QEVVEEHCAS(0.829)PEDK;VSAEAEVAPVS(0.004)PEVT(0.15)QEVVEEHCAS(0.846)PEDK;VSAEAEVAPVSPEVTQEVVEEHCAS(1)PEDK;VSAEAEVAPVS(0.003)PEVT(0.164)QEVVEEHCAS(0.833)PEDK 128.59 7.43E-14 133468100 292513 274579 254936 240937 250551 179249 296724 243829 188585 321864 TRUE FALSE 314908.0202 260943.8061 263435.439 221251.6764 240713.1088 186070.4463 257763.7824 275698.2875 204987.7824 311361.604 1.011390024 0.838073169 0.846075546 0.710593964 0.773098242 0.597602414 0.827859887 0.885460134 0.658359219 1 18.24823152 -4.471875496 1.275003012 0.771704207 1.284843587 0.272705863 0.109172469 3.445295409 2.92172371 0.031081843 2.79715675 3.37E-05 4.471875496 0.51313938 VSAGEPGSHPS(ph)PAPR ddPTM_A459_MK2206_30min_R1 5 VSAGEPGSHPSPAPR 15 0 C9JME2;Q9Y4F1;Q9Y4F1-2;A0A1B0GV68 C9JME2 FARP1 "FERM, RhoGEF and pleckstrin domain-containing protein 1" 1 VSAGEPGSHPS(1)PAPR;VSAGEPGS(0.001)HPS(0.999)PAPR;VSAGEPGSHPS(1)PAPR;VS(0.002)AGEPGS(0.019)HPS(0.979)PAPR;VSAGEPGS(0.023)HPS(0.977)PAPR 220.52 2.05E-09 69012300 10183.5 7582.9 8299 6688.71 9446.5 9436.2 11100.1 10430.2 8067.68 8252.6 TRUE FALSE 9317.339849 7089.251832 7735.687002 7203.875603 9070.225902 9970.469489 10359.63258 10339.00986 8906.344206 9274.994392 1.004565551 0.764340282 0.834036839 0.776698648 0.977922521 1.074983883 1.116942194 1.114718718 0.960253325 1 13.17913069 -6.477453589 3.8816713 1.062837994 0.8392954 0.624536879 0.075888689 0.139198543 4.365707678 0.024538976 0.026925638 3.33E-07 6.477453589 -0.223542594 VSAGEPGSHPS(ph)PAPR ddPTM_A459_MK2206_30min_R2 4 VSAGEPGSHPSPAPR 15 0 C9JME2;Q9Y4F1;Q9Y4F1-2;A0A1B0GV68 C9JME2 FARP1 "FERM, RhoGEF and pleckstrin domain-containing protein 1" 1 VSAGEPGS(0.007)HPS(0.993)PAPR;VSAGEPGSHPS(1)PAPR;VS(0.032)AGEPGS(0.308)HPS(0.66)PAPR;VSAGEPGS(0.01)HPS(0.99)PAPR 151.49 0.00024538 68653000 124848.5 113520.3 118210.5 147783.6 122103 156230 166062 106056 167629 134039.2 TRUE FALSE 134406.9972 107883.047 122151.5791 135709.2071 117308.6227 162175.4421 144257.8599 119917.8833 182209.0674 129665.5119 1.03656705 0.832010343 0.942051416 1.04660989 0.904701805 1.250721489 1.112538391 0.924824817 1.405223831 1 16.98443528 -6.74673312 24.99996384 1.132330564 0.950360709 0.321854196 0.135020361 293.8139743 499469.1548 0.04294003 0.042764427 1.79E-07 6.74673312 -0.181969855 VSALVQS(ph)PQMK ddPTM_A459_MK2206_30min_R2 1 VSALVQSPQMK 11 0 Q5VV67-2;Q5VV67;E7EVG6;X6R7H2 Q5VV67-2 PPRC1 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 1 VSALVQS(1)PQMK 126.95 0.0030611 3098600 18212 21488 25399 21740 27240 23095 29098 19119 19488 28999 TRUE FALSE 19606.32472 20420.93717 26245.78998 19963.77246 26170.42073 23973.89641 25277.39765 21617.91895 21183.03101 28052.765 0.698908814 0.727947394 0.935586563 0.711650793 0.932899867 0.854600122 0.901066174 0.770616335 0.755113837 1 14.77585536 -5.113192797 6.708362188 0.848207535 0.706094411 0.307462172 0.086090107 0.274408826 14.06984608 0.020986933 0.057090643 7.71E-06 5.113192797 -0.142113124 VSAS(ph)SPSLAVASQSDSK ddPTM_A459_MK2206_30min_R1 1 VSASSPSLAVASQSDSK 17 0 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;D6RDA9;Q3MSN4 P04150-3 NR3C1 Glucocorticoid receptor 1 VS(0.004)AS(0.928)S(0.067)PSLAVASQSDSK 328.73 1.23E-135 8168700 3827.3 2951.5 3202.2 2565.3 3105.6 2549.2 2563.8 2444.8 2356.1 2531.3 TRUE FALSE 3501.768037 2759.356814 2984.843586 2762.87985 2981.897376 2693.533501 2392.77358 2423.425371 2601.025026 2844.896554 1.230894681 0.969932214 1.049192309 0.971170585 1.048156697 0.946794883 0.841075777 0.851850085 0.914277541 1 11.47416048 -1.522878745 0.420872198 0.906559302 6.040931457 0.594155148 0.06803433 57.3174573 0.73324052 0.048011897 247.921926 0.03 1.522878745 5.134372155 VSAS(ph)SPSLAVASQSDSK ddPTM_A459_MK2206_30min_R2 1 VSASSPSLAVASQSDSK 17 0 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;D6RDA9;Q3MSN4 P04150-3 NR3C1 Glucocorticoid receptor 1 VSAS(0.949)S(0.051)PSLAVASQSDSK 257.72 4.60E-40 15148000 39228 44426 37753 38577 38204 33774 48178 27015 30739 41008 TRUE FALSE 42231.32584 42219.86944 39011.66618 35425.1357 36703.919 35059.29324 41852.17073 30545.95326 33412.62266 39669.91232 1.064568167 1.064279374 0.983406917 0.89299758 0.925233177 0.883775415 1.055010417 0.770003044 0.842266108 1 15.27575759 -5.488800616 2.526412114 0.905618317 1.06664456 0.409252376 0.074140583 0.281376429 3.526759431 0.021220367 0.050679929 3.24E-06 5.488800616 0.161026243 VSAS(ph)SPTTK ddPTM_A459_MK2206_30min_R1 2 VSASSPTTK 9 0 Q5JWZ0;Q5JXL1;Q9BVI0 Q5JWZ0 PHF20 PHD finger protein 20 1 VS(0.158)AS(0.547)S(0.29)PT(0.004)TK;VSAS(0.665)S(0.32)PT(0.013)T(0.001)K 159.34 0.0008891 40743000 22816 24429 22670.8 19352 17117.3 16861.3 20662.3 20320 8640.6 17225 TRUE FALSE 20875.37939 22838.66766 21131.96926 20842.49439 16435.48169 17815.97223 19283.95567 20142.34438 9538.821291 19358.96304 1.078331486 1.179746436 1.091585805 1.07663279 0.848985643 0.920295792 0.996125445 1.04046608 0.492734103 1 14.24071406 -6.156119355 4.226920763 0.892798918 1.117555162 0.359874024 0.14605911 0.27172768 8.311898388 0.043432456 0.057035843 6.98E-07 6.156119355 0.224756244 VSAS(ph)SPTTK ddPTM_A459_MK2206_30min_R2 3 VSASSPTTK 9 0 Q5JWZ0;Q5JXL1;Q9BVI0 Q5JWZ0 PHF20 PHD finger protein 20 1 VSAS(0.498)S(0.498)PT(0.004)TK;VSAS(0.499)S(0.499)PT(0.003)TK;VSAS(0.5)S(0.5)PTTK 199.33 0.00087461 50680000 261403 281656 251613 275883 288118 219065 317283 237571 224355 273493 TRUE FALSE 281416.2147 267669.3726 260001.6518 253342.4764 276805.0396 227401.6721 275623.361 268622.3454 243868.9924 264568.9458 1.06367818 1.011718786 0.982736848 0.957566942 1.046249169 0.859517625 1.041782739 1.015320769 0.921759701 1 18.01328421 -4.813721157 1.850561819 0.978099081 1.087683767 0.199287082 0.053145243 1.275477652 4.838545706 0.014007021 0.240791517 1.54E-05 4.813721157 0.109584686 VSASS(ph)PSLAVASQSDSK ddPTM_A459_MK2206_30min_R1 2 VSASSPSLAVASQSDSK 17 0 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;D6RDA9;Q3MSN4 P04150-3 NR3C1 Glucocorticoid receptor 1 VS(0.002)AS(0.089)S(0.909)PSLAVASQSDSK;VSAS(0.114)S(0.771)PS(0.114)LAVAS(0.001)QSDSK 217.32 9.48E-12 14483200 6270 5349 5944.9 4884.5 5484.2 4069 5455.3 5400.8 4894.8 4697.2 TRUE FALSE 5736.703575 5000.779128 5541.376751 5260.705036 5265.752701 4299.383264 5091.386891 5353.581375 5403.631976 5279.124598 1.086677056 0.947274313 1.049677205 0.996510868 0.997467024 0.814412159 0.96443772 1.014104001 1.023584853 1 12.366083 -4.751731325 24.69604283 0.976844169 1.086677313 0.217846968 0.061350118 575.154505 1462998.878 0.016218623 0.205851972 1.77E-05 4.751731325 0.109833144 VSASS(ph)PSLAVASQSDSK ddPTM_A459_MK2206_30min_R2 1 VSASSPSLAVASQSDSK 17 0 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;D6RDA9;Q3MSN4 P04150-3 NR3C1 Glucocorticoid receptor 1 VSAS(0.007)S(0.993)PSLAVASQSDSK 308.42 5.33E-103 12956000 65571 55853 54279 66663 61396 50847 64715 49816 52180 62574 TRUE FALSE 70591.16618 53079.42124 56088.63477 61216.41966 58985.28455 52782.01822 56217.84276 56327.12224 56718.52208 60532.2155 1.166175161 0.876878878 0.926591474 1.011303141 0.974444501 0.871965742 0.928726006 0.930531317 0.936997293 1 15.88541553 -4.751900359 24.99929252 0.937996164 1.166175613 0.709197446 0.043491322 215.1809659 563893.5834 0.011110609 0.139829621 1.77E-05 4.751900359 0.228179449 VSASS(ph)PTTK ddPTM_A459_MK2206_30min_R2 1 VSASSPTTK 9 0 Q5JWZ0;Q5JXL1;Q9BVI0 Q5JWZ0 PHF20 PHD finger protein 20 1 VSAS(0.084)S(0.914)PT(0.001)TK 147.3 0.0016532 13690000 54078 57363 58999 57110 60594 44717 64779 53290 45543 62314 TRUE FALSE 58218.25326 54514.43683 60965.99721 52443.93031 58214.7751 46418.73677 56273.43949 60255.18597 49504.24782 60280.69928 0.965785964 0.904343139 1.011368447 0.869995387 0.965728264 0.770043104 0.933523336 0.999576758 0.821228825 1 15.87940853 -5.776841747 24.99927939 0.906214945 0.954883607 0.091688154 0.073986934 604.621433 981347.3253 0.02026407 0.030180141 1.67E-06 5.776841747 0.048668663 VSASSPS(ph)LAVASQSDSK ddPTM_A459_MK2206_30min_R1 1 VSASSPSLAVASQSDSK 17 0 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;D6RDA9;Q3MSN4 P04150-3 NR3C1 Glucocorticoid receptor 1 VS(0.001)AS(0.147)S(0.147)PS(0.683)LAVAS(0.023)QSDSK 125.39 0.0012502 3780400 2163.4 2204.8 2023.1 2030 2156 1496.5 2293.9 1846 2008.3 2000.4 TRUE FALSE 1979.39147 2061.267119 1885.777609 2186.350952 2070.121955 1581.230537 2140.878116 1829.860617 2217.069972 2248.224654 0.880424234 0.916842147 0.838785219 0.972478861 0.920780737 0.70332408 0.952252753 0.813913598 0.98614254 1 11.13457049 -8.360561857 6.960218162 0.99747605 0.87682142 0.29303824 0.073454117 0.34621403 20.59234646 0.069013843 0.017879734 4.36E-09 8.360561857 -0.120654629 VSCHDS(ph)DDDIMR ddPTM_A459_MK2206_30min_R1 1 VSCHDSDDDIMR 12 0 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 1 VSCHDS(1)DDDIMR 151.66 0.00051649 3556700 2271.5 1460 1713.8 1349.7 2517.3 2585.4 2491.8 1971.7 1618 1733.6 TRUE FALSE 2078.296997 1364.953735 1597.472031 1453.654128 2417.030611 2731.783114 2325.576569 1954.461635 1786.19689 1948.371456 1.066684174 0.700561349 0.819901167 0.74608675 1.240538914 1.40208537 1.193600205 1.003125779 0.916764041 1 10.92805304 -6.259222357 24.96984893 1.143357717 0.822868767 0.447830321 0.15836003 183.0985775 2062198.146 0.051147133 0.062850527 5.51E-07 6.259222357 -0.32048895 VSCHDS(ph)DDDIMR ddPTM_A459_MK2206_30min_R2 4 VSCHDSDDDIMR 12 0 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 1 VS(0.178)CHDS(0.822)DDDIMR;VSCHDS(1)DDDIMR;VSCHDS(1)DDDIMR;VSCHDS(1)DDDIMR 199.96 0.00010239 92922000 114594 217818 162192 259543 273481 288926 267508 173262 222337 166137 TRUE FALSE 123367.4047 207001.4749 167599.4003 238337.5067 262742.7618 299921.2814 232383.8783 195907.9383 241675.4704 160715.9633 0.767611395 1.287995732 1.042829828 1.482973451 1.634826786 1.866157382 1.445929038 1.218970003 1.503742786 1 17.29415371 -5.76281417 24.99999944 1.484320108 1.058330584 0.367552288 0.247545057 38.22867744 695195.7083 0.06952053 0.109816511 1.73E-06 5.76281417 -0.425989524 VSDQNS(ph)PVLPK ddPTM_A459_MK2206_30min_R1 4 VSDQNSPVLPK 11 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 VS(0.028)DQNS(0.972)PVLPK;VS(0.001)DQNS(0.999)PVLPK;VSDQNS(1)PVLPK;VSDQNS(1)PVLPK 153 0.00056833 377905000 39255.1 36808.5 40460.1 35641.4 33843.4 31223.7 37225.5 34257.1 34207.4 32647.6 TRUE FALSE 35916.24761 34412.25996 37713.78114 38386.5068 32495.34571 32991.55891 34742.25482 33957.59379 37763.38164 36692.23116 0.978851557 0.93786229 1.027841043 1.046175323 0.885619236 0.899142894 0.94685588 0.925470943 1.029192841 1 15.16318701 -4.375049325 18.65773581 0.963008816 10.06041067 0.001052544 0.054073023 1495.745302 189332.155 0.013799167 1704.862229 4.22E-05 4.375049325 9.097401858 VSDQNS(ph)PVLPK ddPTM_A459_MK2206_30min_R2 5 VSDQNSPVLPK 11 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 VSDQNS(1)PVLPK;VSDQNS(1)PVLPK;VSDQNS(1)PVLPK;VSDQNS(1)PVLPK;VSDQNS(1)PVLPK 148.52 0.00064742 637804000 1807640 1948400 1796860 1962130 2091310 1652410 2159990 1681280 1622240 1806170 TRUE FALSE 1946034.308 1851645.289 1856766.416 1801817.702 2009194.661 1715293.62 1876380.718 1901029.069 1763339.503 1747234.821 1.11377949 1.059757548 1.062688537 1.03123958 1.149928239 0.981719 1.073914448 1.08802151 1.00921724 1 20.73664208 VSDQNS(ph)PVLPKK ddPTM_A459_MK2206_30min_R2 1 VSDQNSPVLPKK 12 1 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 VS(0.037)DQNS(0.963)PVLPKK 62.357 0.045347 3812500 15486 37555 30048 31322 48732 41774 33190 20759 47208 25876 TRUE FALSE 16671.62007 35690.07331 31049.78532 28762.89241 46818.53682 43363.73884 28832.11313 23472.27258 51314.06651 25031.66824 0.666021134 1.425796833 1.240420136 1.149060148 1.870372217 1.732355128 1.151825474 0.937703087 2.049965908 1 14.61146682 -4.7601448 24.94960027 1.398569822 0.666020226 0.272358215 0.357557487 43.87229381 845186.2017 0.088238029 0.533239246 1.74E-05 4.7601448 -0.732549596 VSEEAESQQQWDTSKGEQVSQNGLPAEQGS(ph)PR ddPTM_A459_MK2206_30min_R1 1 VSEEAESQQQWDTSKGEQVSQNGLPAEQGSPR 32 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 VSEEAESQQQWDT(0.002)S(0.002)KGEQVS(0.054)QNGLPAEQGS(0.941)PR 84.452 1.52E-07 15415000 1242.9 1200 1244.4 1199.9 1315.1 1061.9 929.33 1217 817.09 633.02 TRUE FALSE 1137.184828 1121.879782 1159.933595 1292.316506 1262.716782 1122.02386 867.3360914 1206.359897 902.0294295 711.4432967 1.598419486 1.576906813 1.630395002 1.816471547 1.774866371 1.577109329 1.219121883 1.695651506 1.26788661 1 9.474604966 -8.572714139 0.553137983 0.988290804 1.673263163 0.64115022 0.150697102 0.680830334 0.489950218 0.175927424 0.077943066 2.67E-09 8.572714139 0.684972359 VSEEAESQQQWDTSKGEQVSQNGLPAEQGS(ph)PR ddPTM_A459_MK2206_30min_R2 1 VSEEAESQQQWDTSKGEQVSQNGLPAEQGSPR 32 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 1 VSEEAESQQQWDTSKGEQVS(0.008)QNGLPAEQGS(0.992)PR 121.59 2.94E-17 8907100 6232.3 15027 12997 22086 20676 21736 16867 13205 20863 14147 TRUE FALSE 6709.44968 14280.78103 13430.31349 20281.50315 19864.15635 22563.17871 14652.34264 14930.93884 22677.62603 13685.38455 0.490263876 1.04350601 0.981361791 1.4819827 1.451486897 1.648706226 1.07065626 1.091013467 1.657068966 1 13.74034835 -4.689078106 1.127001557 1.341599632 1.20E-11 0.531450902 0.23681655 1.563351449 1.446084746 0.074521189 2.622776061 2.05E-05 4.689078106 -1.341599632 VSEEQTQPPS(ph)PAGAGMSTAMGR ddPTM_A459_MK2206_30min_R1 1 VSEEQTQPPSPAGAGMSTAMGR 22 0 Q16666-3;Q16666-2;Q16666;H3BM18;X6RHM1 Q16666-3 IFI16 Gamma-interferon-inducible protein 16 1 VSEEQTQPPS(0.994)PAGAGMST(0.005)AMGR 160.05 2.56E-11 0 711.62 538.42 642.78 525.87 628.46 648.46 453.02 410.15 462.89 437.22 TRUE FALSE 651.0929821 503.3687601 599.1498845 566.3725985 603.4271074 685.1752448 422.7998624 406.5641018 511.009072 491.3861144 1.325012985 1.024385397 1.219305688 1.15260196 1.228010092 1.394372418 0.860422893 0.827382154 1.039933887 1 8.94071328 -7.277314714 24.97834673 0.917549893 1.211607675 0.631714996 0.108763728 535.7392832 842932.0595 0.045320286 0.030665609 5.28E-08 7.277314714 0.294057782 VSEEQTQPPS(ph)PAGAGMSTAMGR ddPTM_A459_MK2206_30min_R2 3 VSEEQTQPPSPAGAGMSTAMGR 22 0 Q16666-3;Q16666-2;Q16666;H3BM18;X6RHM1 Q16666-3 IFI16 Gamma-interferon-inducible protein 16 1 VSEEQT(0.001)QPPS(0.999)PAGAGMSTAMGR;VSEEQTQPPS(1)PAGAGMSTAMGR;VSEEQTQPPS(1)PAGAGMSTAMGR 233.46 7.52E-31 17971900 51204 70236 56837 80045 53734 62546 63918 61594 55100 53874 TRUE FALSE 55124.21761 66748.18237 58731.91721 73505.06745 51624.13317 64926.23186 55525.48982 69644.54728 59892.4984 52116.09579 1.057719631 1.280759454 1.126943919 1.410410092 0.990560256 1.245799995 1.065419214 1.336334701 1.149213069 1 15.66944139 -6.280975211 24.89906565 1.150476811 1.216800246 0.085306927 0.131923845 2518.383634 3209753.682 0.038938232 0.044228416 5.24E-07 6.280975211 0.066323435 VSEFNVS(ph)SEGSGEK ddPTM_A459_MK2206_30min_R2 1 VSEFNVSSEGSGEK 14 0 Q9BVJ6-3;Q9BVJ6 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 VS(0.001)EFNVS(0.86)S(0.139)EGSGEK 119.96 0.0024888 0 14217 10578 11393 13756 12331 9509.8 13373 12817 11155 14114 TRUE FALSE 15305.46445 10052.7119 11772.83693 12632.0908 11846.82298 9871.702103 11617.10904 14492.22591 12125.24174 13653.46134 1.120995188 0.736275707 0.862260246 0.925193289 0.867679095 0.723018278 0.850854501 1.061432376 0.888070903 1 13.73697912 -7.738072438 24.99493381 0.981063744 0.860509796 0.178869472 0.110448038 353.8021532 378452.424 0.050471691 0.029117007 1.83E-08 7.738072438 -0.120553948 VSEPLLSATSAS(ph)PTQVVSQLPMGR ddPTM_A459_MK2206_30min_R2 1 VSEPLLSATSASPTQVVSQLPMGR 24 0 W0Z7M9;A0A499FIJ6;A0A494BZX7;Q969V6;E7ER32;A0A087X287 W0Z7M9 mkl1;MKL1 MKL/myocardin-like protein 1 1 VSEPLLSAT(0.003)S(0.053)AS(0.912)PT(0.031)QVVSQLPMGR 92.238 2.33E-05 2798500 7992.3 8212.9 8700 11353 8013.6 10165 9043.3 7401.4 10766 7798.8 TRUE FALSE 8604.196633 7805.059329 8990.053658 10425.42358 7698.945799 10551.8362 7855.903847 8368.788393 11702.40722 7544.325795 1.140485826 1.034560217 1.191631155 1.381889365 1.020494874 1.398645351 1.041299655 1.109282475 1.551153481 1 12.88117626 -5.391267762 6.204174876 1.216885746 1.089114883 0.075607479 0.174859741 0.579127248 26.46097741 0.043734317 0.092285236 4.06E-06 5.391267762 -0.127770862 VSESEGKLEGQATAVT(ph)PNK ddPTM_A459_MK2206_30min_R2 1 VSESEGKLEGQATAVTPNK 19 1 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 VSESEGKLEGQAT(0.001)AVT(0.999)PNK 86.411 0.004959 4270200 19301 19678 17852 18833 21296 13350 24699 15026 11797 21353 TRUE FALSE 20778.6994 18700.81913 18447.17677 17294.28366 20459.81204 13858.0436 21455.99163 16989.94979 12823.08174 20656.25336 1.005927795 0.905334516 0.893055311 0.837242038 0.990489983 0.670888537 1.038716521 0.822508782 0.620784491 1 14.33429098 -1.522878745 0.529054061 0.842722158 6.858183262 0.11256265 0.127957939 275.8782087 2.695805229 0.064149441 1869.612251 0.03 1.522878745 6.015461104 VSESPSPVTTNTPAQFAS(ph)VSPTVPEFLK ddPTM_A459_MK2206_30min_R2 1 VSESPSPVTTNTPAQFASVSPTVPEFLK 28 0 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2S3;Q9ULH7-2;Q9ULH7-3 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2;Phosphatase and actin regulator 1 VSESPSPVT(0.001)T(0.001)NT(0.001)PAQFAS(0.545)VS(0.295)PT(0.156)VPEFLK 64.707 0.00068214 3195500 11437 12439 13803 11091 15502 10661 15727 12513 16079 15007 TRUE FALSE 12312.62551 11821.29735 14263.18513 10184.82982 14893.31359 11066.71183 13662.02601 14148.49206 17477.52236 14517.32282 0.848133342 0.814289074 0.982494177 0.701563914 1.025899456 0.76231079 0.941084398 0.974593748 1.203908088 1 13.82548781 -7.859297064 2.341717997 1.098188267 0.86162833 0.45108941 0.103239681 0.253983481 2.713136581 0.068129478 0.026730991 1.38E-08 7.859297064 -0.236559937 VSESPSPVTTNTPAQFASVS(ph)PTVPEFLK ddPTM_A459_MK2206_30min_R2 2 VSESPSPVTTNTPAQFASVSPTVPEFLK 28 0 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2S3;Q9ULH7-2;Q9ULH7-3 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2;Phosphatase and actin regulator 1 VSESPSPVTTNTPAQFAS(0.138)VS(0.708)PT(0.153)VPEFLK;VSESPSPVTTNTPAQFAS(0.063)VS(0.726)PT(0.211)VPEFLK 116.36 2.78E-12 5274000 50586 61210 52969 61511 60088 53865 65211 46148.1 50729 62680 TRUE FALSE 54458.90305 58170.40041 54734.96002 56485.35454 57728.6432 55914.87032 56648.71737 52179.81512 55141.31672 60634.75673 0.89814664 0.959357364 0.902699425 0.931567266 0.95207182 0.922158731 0.934261477 0.860559487 0.909401137 1 15.88785738 -7.269682335 0.003224544 1.851813329 1.06E-07 0.101923302 0.034494 69031.84978 134.2934793 38366.72898 38750.71239 5.37E-08 7.269682335 -1.851813223 VSET(ph)SRT(ph)T(ph)T(ph)TSLSPELIR ddPTM_A459_MK2206_30min_R1 1 VSETSRTTTTSLSPELIR 18 1 A0A0U1RRJ0;A0A0U1RQC5;Q9HDB5;Q9Y4C0 A0A0U1RRJ0 NRXN3 "Neurexin-3-beta;Neurexin-3-beta, soluble form;Neurexin-3-beta, C-terminal fragment;Neurexin-3" 4 VS(0.013)ET(0.861)S(0.378)RT(0.873)T(0.873)T(0.379)T(0.321)S(0.272)LS(0.03)PELIR 67.416 0.011182 9815600 3558 1428.1 1514 2279.9 1678.4 3225.9 2484.8 1573 1267.3 1415.2 TRUE FALSE 3255.373416 1335.13043 1411.233898 2455.498293 1611.545774 3408.54767 2319.043526 1559.247427 1399.04037 1590.52566 2.046728008 0.839427155 0.887275153 1.543828153 1.013215828 2.143032178 1.458035908 0.980334657 0.879608802 1 10.63528793 -7.78620006 8.515705299 0.945470491 1.393166367 0.206372141 0.416137913 0.404158529 117.9109041 0.228668544 0.112382941 1.64E-08 7.78620006 0.447695876 VSFELFADK ddPTM_A459_MK2206_30min_R1 2 VSFELFADK 9 0 P62937;F8WE65;C9J5S7 P62937 PPIA "Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase" 0 ; 145.72 0.025226 17803700 6682.3 6485.4 4736.7 4996.4 5005.5 5409.6 6009.1 5352.8 5603.3 6868.2 FALSE TRUE 6113.935295 6063.199281 4415.186001 5381.223594 4806.120336 5715.886877 5608.243903 5306.001034 6185.783087 7719.084468 0.792054462 0.78548166 0.571983118 0.697132363 0.622628286 0.740487671 0.726542626 0.687387352 0.801362275 1 12.91421403 -8.648244145 2.255469865 0.999925445 0.700064876 0.66656217 0.064008373 0.304612697 3.237387625 0.063660127 0.017412593 2.25E-09 8.648244145 -0.29986057 VSFELFADK ddPTM_A459_MK2206_30min_R2 1 VSFELFADK 9 0 P62937;F8WE65;C9J5S7 P62937 PPIA "Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase" 0 145.72 0.025226 2383800 20608 19538 16766 20551 16259 16046 21316 19634 14281 23443 FALSE TRUE 22185.76432 18567.77133 17324.97007 18871.91756 15620.58997 16656.64177 18517.18359 22200.23121 15523.13557 22678.05683 0.978292121 0.818754952 0.763953023 0.832166429 0.688797549 0.73448276 0.816524261 0.978930046 0.68450025 1 14.46900941 -10.32035834 8.944431241 1 0.809494506 0.251873979 0.097848012 0 0 0.094695067 0.022966927 4.78E-11 10.32035834 -0.190505494 VSFELFADKVPK ddPTM_A459_MK2206_30min_R1 2 VSFELFADKVPK 12 1 P62937;F8WE65;C9J5S7 P62937 PPIA "Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase" 0 ; 110.98 0.019703 43045000 8182.7 7924.9 9379.7 8973.2 7716.2 7065.9 8220.8 8077.7 5873.5 5808 FALSE TRUE 7486.718396 7408.98757 8743.032097 9664.317419 7408.847415 7465.965152 7672.405432 8007.077521 6484.071344 6527.538888 1.146943515 1.135035378 1.339407125 1.480545361 1.135013907 1.143764178 1.175390229 1.226661022 0.993340898 1 12.67232343 -8.131993477 0.805008248 0.986241298 1.247545178 0.379955717 0.108987809 0.70321895 0.943363883 0.11222598 0.04461813 7.38E-09 8.131993477 0.261303881 VSFPSYLAS(ph)PAGSR ddPTM_A459_MK2206_30min_R2 1 VSFPSYLASPAGSR 14 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 VS(0.13)FPS(0.011)YLAS(0.837)PAGS(0.022)R 102.63 0.0074537 3206300 8516.2 11140 13234 11029 9110.5 11316 11721 7479.5 7575.2 13069 TRUE FALSE 9168.20682 10586.8038 13675.21495 10127.89542 8752.775993 11746.63831 10182.01862 8457.096331 8234.077203 12642.5596 0.725185968 0.837394019 1.081680877 0.801095327 0.692326259 0.929134501 0.805376359 0.668938617 0.651298271 1 13.62600096 -5.976235876 24.975232 0.779004147 0.887746057 0.082236677 0.132129435 505.7871885 531560.1992 0.03776875 0.056017145 1.06E-06 5.976235876 0.10874191 VSGAGFS(ph)PSSK ddPTM_A459_MK2206_30min_R2 6 VSGAGFSPSSK 11 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 VSGAGFS(0.984)PS(0.015)S(0.002)K;VSGAGFS(1)PSSK;VSGAGFS(0.978)PS(0.022)SK;VS(0.001)GAGFS(0.989)PS(0.009)S(0.002)K;VS(0.012)GAGFS(0.984)PS(0.002)S(0.002)K;VSGAGFS(0.99)PS(0.009)S(0.001)K 176.99 6.73E-05 381238000 1603326 1734135 1482053 1536377 1542994 1267199 1720959 1350001 1283030 1537068 TRUE FALSE 1726077.871 1648020.378 1531463.907 1410850.084 1482408.303 1315423.146 1494995.016 1526450.766 1394625.63 1486913.597 1.160846114 1.108349793 1.0299616 0.948844699 0.996970036 0.884666835 1.005435029 1.026590092 0.937933201 1 20.50388939 -5.269507638 1.889022769 0.971170538 1.159520175 0.733749268 0.039308357 0.202944449 1.283652654 0.011305526 0.046774647 5.38E-06 5.269507638 0.188349637 VSGAGFSPS(ph)SK ddPTM_A459_MK2206_30min_R1 1 VSGAGFSPSSK 11 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 VSGAGFS(0.25)PS(0.685)S(0.065)K 146.5 0.000683 88070000 6707.1 6852.6 5822.1 5236 5552.3 4745.1 5500.4 5569.8 5143.8 4129.7 TRUE FALSE 6136.625925 6406.494494 5426.912073 5639.277627 5331.140134 5013.763461 5133.478352 5521.103826 5678.516417 4641.318414 1.322173007 1.380317816 1.169260884 1.215016322 1.148626243 1.080245528 1.106038822 1.189555065 1.223470555 1 12.18031896 -5.406543873 1.517765383 1.135878655 1.367226756 0.607432328 0.066410969 0.327082997 1.338032889 0.020169057 0.078694991 3.92E-06 5.406543873 0.231348102 VSGEEELHTGPPAPQGPLSVPQGLPTQSLAS(ph)PPAR ddPTM_A459_MK2206_30min_R1 2 VSGEEELHTGPPAPQGPLSVPQGLPTQSLASPPAR 35 0 Q9UPN7 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 1 VSGEEELHTGPPAPQGPLSVPQGLPT(0.056)QS(0.096)LAS(0.848)PPAR;VSGEEELHTGPPAPQGPLSVPQGLPT(0.006)QS(0.004)LAS(0.99)PPAR 147.2 1.18E-27 62913000 1230.73 1160.91 1345.06 1012.47 1148.66 1135.13 1062.61 976.12 1123.4 929.06 TRUE FALSE 1126.049951 1085.334548 1253.761075 1090.450615 1102.90644 1199.40008 991.7252257 967.5858858 1240.18145 1044.158967 1.078427698 1.039434207 1.200737737 1.044333908 1.056262959 1.148675745 0.949783756 0.926665303 1.187732414 1 10.02812565 -7.25959503 24.99852191 1.009934145 1.092926616 0.186915715 0.07985676 278.4849393 3774656.924 0.03114151 0.022875936 5.50E-08 7.25959503 0.082992471 VSGEEELHTGPPAPQGPLSVPQGLPTQSLAS(ph)PPAR ddPTM_A459_MK2206_30min_R2 4 VSGEEELHTGPPAPQGPLSVPQGLPTQSLASPPAR 35 0 Q9UPN7 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 1 VSGEEELHTGPPAPQGPLSVPQGLPT(0.011)QS(0.008)LAS(0.981)PPAR;VSGEEELHTGPPAPQGPLSVPQGLPT(0.018)QS(0.018)LAS(0.963)PPAR;VSGEEELHTGPPAPQGPLSVPQGLPT(0.092)QS(0.092)LAS(0.817)PPAR;VSGEEELHTGPPAPQGPLSVPQGLPT(0.005)QS(0.003)LAS(0.992)PPAR 143.09 9.83E-27 55355000 82409 95725 90920 103345 90653 93870 100262 62927 82631 96656 TRUE FALSE 88718.2964 90971.4357 93951.22742 94901.38292 87093.50773 97442.28863 87097.47896 71151.77496 89818.09502 93502.12264 0.948837245 0.972934444 1.004803151 1.014965011 0.93146022 1.042139856 0.931502692 0.760964275 0.96059953 1 16.5127115 -7.520131269 24.99861869 0.885715843 0.985134387 0.213534108 0.06565438 128.4488114 1168760.592 0.028403044 0.016782272 3.02E-08 7.520131269 0.099418543 VSGRT(ph)SPPLLDR ddPTM_A459_MK2206_30min_R1 1 VSGRTSPPLLDR 12 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VS(0.413)GRT(0.498)S(0.089)PPLLDR 85.976 0.04225 299620000 5022.5 4920.8 4839.2 6084 6650.7 4264.1 3816.9 5895.6 2299.3 920 TRUE FALSE 4595.310001 4600.455026 4510.728587 6552.590734 6385.788536 4505.529657 3562.281565 5844.055391 2538.320463 1033.976546 4.444307775 4.449283734 4.362505712 6.337272119 6.175951053 4.35747762 3.44522473 5.652019299 2.454911065 1 10.01398775 -8.453785155 3.722269965 1.01896084 4.887866667 0.69482259 0.865792184 0.122076471 3.301721149 0.897234311 0.236488638 3.52E-09 8.453785155 3.868905827 VSGS(ph)PEQAVEENLSSYSLDRR ddPTM_A459_MK2206_30min_R1 2 VSGSPEQAVEENLSSYSLDRR 21 1 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 VS(0.243)GS(0.753)PEQAVEENLSS(0.001)YS(0.002)LDRR;VS(0.063)GS(0.937)PEQAVEENLSSYSLDRR 113.67 4.36E-05 44652000 1433.99 1352.53 1441.62 1433.99 1564.39 1153.08 1416.31 1110.89 1335.7 1246 TRUE FALSE 1312.02162 1264.480051 1343.766851 1544.436158 1502.077034 1218.366393 1321.830544 1101.177606 1474.550795 1400.363887 0.936914778 0.902965339 0.959584051 1.102882024 1.072633369 0.87003557 0.943919332 0.786351045 1.052976879 1 10.45158605 -6.776334668 24.99353263 0.918132441 0.993909469 0.111720944 0.087177914 490.8068379 823543.7425 0.03164452 0.028020155 1.67E-07 6.776334668 0.075777028 VSGTLDT(ph)PEK ddPTM_A459_MK2206_30min_R2 4 VSGTLDTPEK 10 0 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 VSGT(0.003)LDT(0.997)PEK;VSGT(0.002)LDT(0.998)PEK;VSGTLDT(1)PEK;VSGT(0.012)LDT(0.988)PEK 148.13 0.0018669 207341000 1377421 859528 963157 865566 798622 601559 1183647 934707 614016 1276559 TRUE FALSE 1482877.411 816845.0894 995268.1737 794846.489 767264.0875 624451.7493 1028232.727 1056876.414 667422.0018 1234904.984 1.200802839 0.661463918 0.805947167 0.643649916 0.621314269 0.505667851 0.832641167 0.85583622 0.540464255 1 20.23596861 -4.758121393 24.97851144 0.708312821 1.20080353 0.49214198 0.146634782 76.52593385 576009.263 0.035373537 0.248514451 1.75E-05 4.758121393 0.492490709 VSGTLDT(ph)PEKTVDSQGPTPVCTPTFLER ddPTM_A459_MK2206_30min_R1 1 VSGTLDTPEKTVDSQGPTPVCTPTFLER 28 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 VS(0.001)GT(0.003)LDT(0.551)PEKT(0.433)VDS(0.012)QGPTPVCTPTFLER 105.82 1.66E-09 75394000 1924.9 1762 1821.8 1816.9 1383.7 1545 1554 1801.9 2016.3 1540.5 TRUE FALSE 1761.177147 1647.29348 1698.141292 1956.837953 1328.584299 1632.476565 1450.335495 1786.146178 2225.9016 1731.34877 1.017228404 0.951450977 0.980819879 1.130239029 0.767369534 0.942892959 0.837691123 1.031650127 1.285645988 1 10.75768066 -8.005667956 24.73373352 1.148098045 0.94732818 0.329250811 0.111695411 221.0261595 964503.9027 0.062574381 0.028534064 9.87E-09 8.005667956 -0.200769865 VSGTLDT(ph)PEKTVDSQGPTPVCTPTFLER ddPTM_A459_MK2206_30min_R2 2 VSGTLDTPEKTVDSQGPTPVCTPTFLER 28 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 VS(0.003)GT(0.019)LDT(0.864)PEKT(0.041)VDS(0.066)QGPT(0.005)PVCTPTFLER;VS(0.003)GT(0.017)LDT(0.369)PEKT(0.369)VDS(0.199)QGPT(0.033)PVCT(0.008)PT(0.003)FLER 56.986 0.0096039 12971100 15606.8 21134.1 16228.5 17882.2 20479.9 15387.8 21107.2 19400.2 20126.4 22635.3 TRUE FALSE 16801.66861 20084.61133 16769.55009 16421.16706 19675.75622 15973.39351 18335.79929 21935.87275 21876.95789 21896.71201 0.767314682 0.917243252 0.765847862 0.749937573 0.898571265 0.729488222 0.83737683 1.00178843 0.99909785 1 14.41842663 -7.724979032 4.686789384 1.002274168 0.80815416 0.69851577 0.057714718 0.106243804 5.310699446 0.029028485 0.015374258 1.88E-08 7.724979032 -0.194120008 VSGTLDTPEKT(ph)VDSQGPTPVCTPTFLER ddPTM_A459_MK2206_30min_R1 3 VSGTLDTPEKTVDSQGPTPVCTPTFLER 28 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 VSGTLDT(0.014)PEKT(0.948)VDS(0.038)QGPTPVCTPTFLER;VSGT(0.004)LDT(0.184)PEKT(0.722)VDS(0.09)QGPTPVCTPTFLER;VSGT(0.002)LDT(0.14)PEKT(0.632)VDS(0.221)QGPT(0.003)PVCTPTFLER 102.73 3.77E-07 88432900 4585.81 5446 5057.23 5087.23 3874.87 4176.17 4160.24 5042.75 4486.91 3865.95 TRUE FALSE 4195.762778 5091.46441 4713.959318 5479.049336 3720.525723 4412.621136 3882.71798 4998.661768 4953.340351 4344.893072 0.965676878 1.171827321 1.084942538 1.261032031 0.85629857 1.01558797 0.893627971 1.150468305 1.140037342 1 12.08510496 VSGTLDTPEKT(ph)VDSQGPTPVCTPTFLER ddPTM_A459_MK2206_30min_R2 2 VSGTLDTPEKTVDSQGPTPVCTPTFLER 28 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 VSGT(0.001)LDT(0.182)PEKT(0.692)VDS(0.119)QGPT(0.006)PVCTPTFLER;VSGT(0.002)LDT(0.191)PEKT(0.606)VDS(0.197)QGPT(0.004)PVCTPTFLER 70.295 0.0006716 46814100 56548 77776 72957 70231 74491 50837 91939 68660 59028.9 80743 TRUE FALSE 60877.35836 73913.75694 75389.34997 64492.90264 71566.10905 52771.63766 79867.29886 77634.09775 64163.12702 78108.36252 0.779396167 0.946297612 0.965189226 0.825684991 0.916241318 0.675620842 1.022519181 0.993928118 0.821462964 1 16.2531894 -9.214188327 0.416695695 1.010192603 0.873039375 0.106367223 0.102157931 7.358558546 2.106742209 0.282757541 0.070397815 6.11E-10 9.214188327 -0.137153228 VSGTLDTPEKTVDS(ph)QGPTPVCTPTFLER ddPTM_A459_MK2206_30min_R2 1 VSGTLDTPEKTVDSQGPTPVCTPTFLER 28 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 VS(0.002)GT(0.012)LDT(0.264)PEKT(0.264)VDS(0.431)QGPT(0.016)PVCT(0.008)PT(0.004)FLER 53.751 0.0055588 47076000 38300 44039 34391 37594 45014 29707 54924 34544 41451 49231 TRUE FALSE 41232.27745 41852.0873 35537.57878 34522.44994 43246.52418 30837.5207 47712.41282 39059.01941 45056.33305 47624.5965 0.86577694 0.878791431 0.746202202 0.72488698 0.908071193 0.647512482 1.001843928 0.820143839 0.946072752 1 15.53941925 -8.132921256 0.880314166 0.994425763 0.804825059 0.311891863 0.093630329 0.684942065 1.070892401 0.085206009 0.032219181 7.36E-09 8.132921256 -0.189600704 VSHEQFR ddPTM_A459_MK2206_30min_R2 2 VSHEQFR 7 0 O96013;O96013-2;O96013-4;O96013-3;Q9P286 O96013 PAK4;PAK7 Serine/threonine-protein kinase PAK 4;Serine/threonine-protein kinase PAK 7 0 ; 183.9 2.41E-06 5401600 21808.6 22362 19754.4 27399 23753 24344 24629 21037 21084.1 20990 FALSE TRUE 23478.28318 21251.5356 20413.00184 25160.41405 22820.33787 25270.42798 21395.18272 23786.60813 22917.95691 20305.09802 1.156275294 1.046610835 1.005314124 1.239118079 1.123872332 1.244536124 1.053685271 1.171459902 1.128679945 1 14.30955437 -4.467591622 16.36075006 1.12002051 1.447219979 0.017190254 0.083532044 4947242.169 36572957.05 0.020549177 52870836.95 3.41E-05 4.467591622 0.327199469 VSHLLGINVTDFTR ddPTM_A459_MK2206_30min_R1 2 VSHLLGINVTDFTR 14 0 P35579;P35579-2 P35579;P35579-2 MYH9 Myosin-9 0 ; 124.42 0.0020865 9191700 2931.4 3316.2 2915.1 2890.2 3254.2 2744.7 3147.7 2966.4 2645.5 2676.1 FALSE TRUE 2682.069037 3100.314777 2717.231134 3112.803705 3124.578323 2900.102542 2937.722676 2940.465078 2920.509192 3007.635472 0.89175336 1.030814674 0.903444304 1.034967081 1.03888199 0.964246688 0.976754897 0.97766671 0.971031636 1 11.55441401 -4.744176194 24.85882802 0.987168297 0.891753051 0.35943302 0.038759399 1152.046611 1658841.394 0.00950472 0.276364985 1.80E-05 4.744176194 -0.095415246 VSHS(ph)PPPK ddPTM_A459_MK2206_30min_R1 1 VSHSPPPK 8 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VS(0.049)HS(0.951)PPPK 99.788 0.018368 27407000 6216.5 5272.4 4483.8 5190.6 3144.8 3784.6 5794.8 6327.4 1034.3 3447.8 TRUE FALSE 5687.754031 4929.165802 4179.452149 5590.380911 3019.535957 3998.880781 5408.239465 6272.080209 1141.819186 3874.939494 1.467830411 1.27206265 1.078585138 1.442701472 0.779247253 1.031985348 1.395696494 1.618626618 0.294667617 1 11.91995807 -1.522878745 0.386607394 1.056979316 6.693147345 0.124421912 0.348955718 181.9641594 2.462275701 0.261919573 772.658152 0.03 1.522878745 5.636168029 VSHYIINSSGPRPPVPPS(ph)PAQPPPGVSPSR ddPTM_A459_MK2206_30min_R2 3 VSHYIINSSGPRPPVPPSPAQPPPGVSPSR 30 1 P46108-2;I3L297;P46108 P46108-2;P46108 CRK Adapter molecule crk 1 VSHYIINS(0.001)SGPRPPVPPS(0.993)PAQPPPGVS(0.004)PS(0.001)R;VS(0.001)HY(0.003)IINS(0.016)S(0.016)GPRPPVPPS(0.855)PAQPPPGVS(0.079)PS(0.031)R;VSHYIINS(0.001)S(0.001)GPRPPVPPS(0.993)PAQPPPGVS(0.003)PS(0.001)R 81.94 5.93E-06 30366800 25115.8 30651.3 29759.3 39990.1 37287.2 32460.1 35448.8 29319 33451 33554 TRUE FALSE 27038.68496 29129.20101 30751.46021 36722.78091 35823.11717 33695.39185 30794.32998 33151.09397 36360.50751 32459.13573 0.833006929 0.897411479 0.947389988 1.131354242 1.103637431 1.038086539 0.948710719 1.021317827 1.120193335 1 14.98633697 -5.457105924 3.02628893 1.049858782 0.864348868 0.642575422 0.056079037 0.173201778 3.080723619 0.016662854 0.038335285 3.49E-06 5.457105924 -0.185509914 VSHYIINSSGPRPPVPPSPAQPPPGVS(ph)PSR ddPTM_A459_MK2206_30min_R1 2 VSHYIINSSGPRPPVPPSPAQPPPGVSPSR 30 1 P46108-2;I3L297;P46108 P46108-2;P46108 CRK Adapter molecule crk 1 VSHYIINSSGPRPPVPPS(0.065)PAQPPPGVS(0.641)PS(0.294)R;VSHYIINS(0.021)S(0.021)GPRPPVPPS(0.153)PAQPPPGVS(0.601)PS(0.204)R 65.033 0.013569 14241000 867.1 481.59 901.43 945.11 811.28 632.97 669.55 944.7 486.07 602.72 TRUE FALSE 793.3485917 450.2384035 840.2434431 1017.902536 778.9649997 668.8082144 624.8855412 936.4405875 536.5987159 677.3895039 1.171185244 0.664666932 1.240414028 1.502684246 1.149951387 0.987331824 0.922490735 1.382425594 0.792156821 1 9.403841822 -6.746378966 23.20539098 1.034883213 1.144137331 0.06604409 0.237548778 402.73411 620536.2582 0.082599407 0.082205437 1.79E-07 6.746378966 0.109254119 VSIGNITLS(ph)PAISR ddPTM_A459_MK2206_30min_R1 2 VSIGNITLSPAISR 14 0 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 VSIGNIT(0.001)LS(0.999)PAISR;VSIGNIT(0.003)LS(0.995)PAIS(0.001)R 144.15 0.00053213 243600000 5031.4 4777.8 4530.9 3457.7 4767.4 4603.1 5120 4264.7 4296.6 5078.9 TRUE FALSE 4603.453009 4466.764352 4223.355132 3724.012653 4577.504363 4863.723544 4778.454142 4227.414178 4743.246946 5708.112476 0.806475526 0.782529141 0.73988646 0.652407021 0.801929601 0.852072128 0.837133845 0.740597561 0.830965922 1 12.47879805 -6.512376645 23.55504305 0.834113439 0.745040411 0.320241045 0.070987535 333.3257574 747615.6597 0.022569279 0.024016865 3.07E-07 6.512376645 -0.089073028 VSIGNITLS(ph)PAISR ddPTM_A459_MK2206_30min_R2 2 VSIGNITLSPAISR 14 0 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 VSIGNITLS(1)PAISR;VSIGNIT(0.001)LS(0.988)PAIS(0.01)R 192.23 0.00011013 191524000 152505 173393 154903 177235 141373 141746 145597 123869 117947 145794 TRUE FALSE 164180.9001 164782.5558 160067.3887 162754.3336 135821.9857 147140.2434 126479.939 140059.1036 128205.8169 141036.7537 1.164100107 1.168366056 1.13493387 1.15398525 0.963025467 1.04327588 0.896787083 0.993068118 0.909024162 1 17.10571165 -6.260452458 24.6156854 0.967433655 1.15481828 0.836414004 0.040690974 26.76354817 667531.8703 0.011898783 0.014487354 5.49E-07 6.260452458 0.187384625 VSISEGDDKIEYR ddPTM_A459_MK2206_30min_R1 1 VSISEGDDKIEYR 13 1 M0R2U2;M0R1H0;M0R2B0;M0R0P1;M0QXL5;M0R2Q4;P22087;M0R299 M0R2U2 FBL rRNA 2-O-methyltransferase fibrillarin 0 103.43 0.023938 5958900 1696.7 1841 1688.1 1228.3 1585.6 1417 1561.9 1591.6 1499.8 1554.5 FALSE TRUE 1552.386755 1721.150565 1573.516475 1322.903879 1522.442194 1497.229315 1457.708501 1577.684809 1655.709577 1747.083196 0.888559148 0.985156614 0.900653431 0.757207145 0.871419402 0.856987989 0.834366963 0.903039313 0.947699332 1 10.7707326 -8.36909113 2.059163087 0.997269415 0.871423039 0.376480299 0.053978939 0.358077973 3.025203675 0.056058452 0.015914883 4.27E-09 8.36909113 -0.125846377 VSISEGDDKIEYR ddPTM_A459_MK2206_30min_R2 2 VSISEGDDKIEYR 13 1 M0R2U2;M0R1H0;M0R2B0;M0R0P1;M0QXL5;M0R2Q4;P22087;M0R299 M0R2U2 FBL rRNA 2-O-methyltransferase fibrillarin 0 ; 146.5 0.0016866 12057500 67030 90401 90367 88111 90984 89268 100243 87562 80670 84249 FALSE TRUE 72161.86834 85911.8178 93379.79068 80912.04945 87411.511 92665.15629 87080.97369 99006.65405 87686.53078 81499.96203 0.88542211 1.054133225 1.145764837 0.992786345 1.072534377 1.136996312 1.068478703 1.214806137 1.075908854 1 16.31451177 -4.782717884 3.590226189 1.093579247 0.861864481 0.478607865 0.063007516 0.229149632 4.987160921 0.015680258 0.143690159 1.65E-05 4.782717884 -0.231714766 VSKS(ph)PSPASTSTVPNMTDAPTAPK ddPTM_A459_MK2206_30min_R2 1 VSKSPSPASTSTVPNMTDAPTAPK 24 1 Q659A1 Q659A1 ICE2 Little elongation complex subunit 2 1 VS(0.197)KS(0.693)PS(0.085)PAS(0.014)T(0.005)S(0.005)T(0.001)VPNMTDAPTAPK 105.44 3.45E-07 20521000 68518 83094 77912 85759 94487 74298 95096 75393 70482 85362 TRUE FALSE 73763.79076 78967.67279 80509.54719 78752.21537 90776.96562 77125.46245 82609.78097 85247.12396 76612.39696 82576.64493 0.893276674 0.956295486 0.974967526 0.953686305 1.099305569 0.933986389 1.000401276 1.032339399 0.927773186 1 16.33344618 -4.428766353 1.013330675 0.995542089 0.769333998 0.291034593 0.047149558 4.34397176 2.229298907 0.014702798 1.265019772 3.73E-05 4.428766353 -0.226208091 VSKSPSPAS(ph)TSTVPNMTDAPTAPK ddPTM_A459_MK2206_30min_R2 1 VSKSPSPASTSTVPNMTDAPTAPK 24 1 Q659A1 Q659A1 ICE2 Little elongation complex subunit 2 1 VS(0.021)KS(0.018)PS(0.022)PAS(0.459)T(0.136)S(0.266)T(0.078)VPNMTDAPTAPK 96.387 5.67E-06 19484000 103030 126120 106680 129100 136400 92809 142640 110810 106180 129710 TRUE FALSE 110918.056 119857.0642 110236.658 118552.117 131044.2506 96340.91153 123911.1967 125293.2475 115415.3445 125477.5733 0.883967175 0.955207062 0.878536738 0.944807218 1.044363922 0.767793869 0.98751668 0.998531006 0.919808548 1 16.93707001 -14.52287598 0.069707543 1.248380102 0.844810398 0.101782679 0.071786197 793.6260594 3.969847757 31.24371414 3.904897452 3.00E-15 14.52287598 -0.403569704 VSLEPHQGPGT(ph)PESK ddPTM_A459_MK2206_30min_R1 2 VSLEPHQGPGTPESK 15 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 VSLEPHQGPGT(0.932)PES(0.068)K;VSLEPHQGPGT(0.574)PES(0.426)K 175.7 4.47E-05 42885300 11539.2 7142.6 7736.9 5705.8 10448.3 9594.9 9678.3 8670.6 6600.8 6378.5 TRUE FALSE 10557.73045 6677.615442 7211.740784 6145.261705 10032.12209 10138.15495 9032.678266 8594.793858 7286.976781 7168.716735 1.472750401 0.931493835 1.006001639 0.857233161 1.399430673 1.414221725 1.260013277 1.1989306 1.016496683 1 12.80749917 -4.736253187 24.58996634 1.137103016 1.472752316 0.245491276 0.183213857 3408.939949 3328027.531 0.05016497 3.480189123 1.84E-05 4.736253187 0.3356493 VSLEPHQGPGT(ph)PESK ddPTM_A459_MK2206_30min_R2 5 VSLEPHQGPGTPESK 15 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 VSLEPHQGPGT(0.998)PES(0.002)K;VSLEPHQGPGT(0.995)PES(0.005)K;VSLEPHQGPGT(0.648)PES(0.352)K;VSLEPHQGPGT(0.998)PES(0.002)K;VSLEPHQGPGT(0.969)PES(0.031)K 239.7 1.08E-19 254990200 294502 458875 348805 485180 460361 402241 503947 383696 396656 386315 TRUE FALSE 317049.2996 436087.9348 360433.9846 445539.242 442284.914 417548.5631 437778.1536 433846.3846 431156.4219 373709.5732 0.848384206 1.166916681 0.964476188 1.192207195 1.183499021 1.117307645 1.171439495 1.160918574 1.15372057 1 18.511558 -4.281570272 1.993958078 1.131596957 9.14E-24 0.519781802 0.076998614 4.199168379 4.429318688 0.019780921 14.42552205 5.23E-05 4.281570272 -1.131596957 VSLEPHQGPGTPES(ph)K ddPTM_A459_MK2206_30min_R1 1 VSLEPHQGPGTPESK 15 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 VSLEPHQGPGT(0.43)PES(0.57)K 233.84 2.78E-14 40822000 2926.6 1626.6 2436.9 1380.8 2335.8 2336.5 2582.6 1825.1 1530.5 1518.8 TRUE FALSE 2677.677302 1520.708044 2271.490018 1487.149455 2242.76014 2468.790611 2410.319466 1809.143343 1689.600952 1706.96041 1.56868155 0.890886534 1.330722144 0.871226682 1.313891128 1.446308067 1.412053526 1.059862509 0.989830193 1 10.73721388 -7.93978467 8.681785904 1.004713439 1.244270255 0.219616778 0.212329664 0.454734029 59.76516929 0.116688084 0.055808929 1.15E-08 7.93978467 0.239556816 VSLLGPVT(ph)TPEHQLLK ddPTM_A459_MK2206_30min_R1 2 VSLLGPVTTPEHQLLK 16 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 VSLLGPVT(0.623)T(0.377)PEHQLLK;VSLLGPVT(0.639)T(0.361)PEHQLLK 112.74 0.0032451 27955000 11453.9 9692 9030.1 9155.4 9765.1 9643.1 8585.1 7701.5 8539.3 7147.4 TRUE FALSE 10479.68566 9061.049038 8417.161971 9860.550494 9376.135389 10189.08399 8012.403643 7634.166597 9426.990793 8032.873872 1.304599801 1.127995931 1.047839429 1.227524626 1.167220541 1.268423251 0.997451693 0.95036555 1.173551452 1 12.97170051 -7.275004161 24.96118024 1.02620596 1.181881422 0.450001574 0.08642596 779.3512019 1434113.877 0.036146903 0.024528483 5.31E-08 7.275004161 0.155675463 VSLLGPVT(ph)TPEHQLLK ddPTM_A459_MK2206_30min_R2 2 VSLLGPVTTPEHQLLK 16 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 VSLLGPVT(0.915)T(0.085)PEHQLLK;VSLLGPVT(0.981)T(0.019)PEHQLLK 174.87 2.92E-06 41163000 156627 158453 127863 161449 151612 127784 164960 131129 117177 141910 TRUE FALSE 168618.4835 150584.4544 132125.8886 148258.1003 145658.9511 132646.9097 143300.5538 148268.0105 127368.8437 137279.4883 1.228286073 1.096918821 0.96245907 1.079972704 1.061039438 0.9662544 1.043859907 1.080044895 0.927806806 1 17.06675656 -4.871304625 3.081754895 1.021266048 1.241330904 0.629796171 0.050089055 0.192664865 3.017418164 0.012441314 0.093320281 1.34E-05 4.871304625 0.220064857 VSLPS(ph)SPVPASPASSSGADQR ddPTM_A459_MK2206_30min_R2 1 VSLPSSPVPASPASSSGADQR 21 0 Q5T6S3-2 Q5T6S3-2 1 VSLPS(0.85)S(0.15)PVPASPASSSGADQR 297.7 2.29E-101 6166000 18894 21848 13439 17614 21211 18720 18287 13090 17397 17949 TRUE FALSE 20340.53917 20763.06009 13887.04955 16174.87986 20378.14956 19432.40272 15885.89493 14800.90794 18910.15961 17363.3256 1.17146563 1.195799731 0.799792037 0.931554256 1.173631713 1.119163642 0.914910847 0.852423567 1.089086276 1 14.08375567 -5.212088524 24.96524756 0.986906035 1.18363297 0.335999903 0.111629394 457.8763952 231625.4711 0.030379254 0.080375694 6.14E-06 5.212088524 0.196726935 VSLPSS(ph)PVPASPASSSGADQR ddPTM_A459_MK2206_30min_R1 2 VSLPSSPVPASPASSSGADQR 21 0 Q5T6S3-2 Q5T6S3-2 1 VSLPS(0.037)S(0.963)PVPASPASSSGADQR;VSLPS(0.3)S(0.7)PVPASPASSSGADQR 285.06 1.80E-73 6516500 2336.5 1763.61 1662.14 1367.57 1593.61 1419.23 1733.83 1427.17 1527.43 1342.64 TRUE FALSE 2137.768406 1648.798668 1549.318568 1472.900478 1530.133139 1499.585576 1618.169364 1414.692403 1686.211814 1508.97638 1.416701039 1.092660356 1.026734804 0.976092468 1.014020604 0.993776706 1.072362289 0.937517924 1.117454082 1 10.55935451 -4.71184985 2.41090698 1.01474825 1.558969527 0.865042332 0.047157634 0.223122572 1.350721253 0.01134237 0.274626974 1.94E-05 4.71184985 0.544221277 VSLPSS(ph)PVPASPASSSGADQR ddPTM_A459_MK2206_30min_R2 1 VSLPSSPVPASPASSSGADQR 21 0 Q5T6S3-2 Q5T6S3-2 1 VSLPS(0.227)S(0.773)PVPASPASSSGADQR 259.34 1.64E-48 5232200 16744 20858 15062 21028 17973 16043 17730 12366 13607 17584 TRUE FALSE 18025.93351 19822.22205 15564.15956 19309.94513 17267.28971 16653.52761 15402.0297 13982.27866 14790.51226 17010.23552 1.059710989 1.16531144 0.914987893 1.135195636 1.015111736 0.979029808 0.905456581 0.821992067 0.869506612 1 14.0541155 -6.97428211 1.767683917 0.881984515 1.064748063 0.498299444 0.075271746 0.276181231 1.747337152 0.03367263 0.026159601 1.06E-07 6.97428211 0.182763548 VSMPDVELNLKS(ph)PK ddPTM_A459_MK2206_30min_R1 2 VSMPDVELNLKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK 91.065 0.0095975 685390000 14862.4 15438.4 12926.8 11294.5 5021 5127 5156.8 6393 5608.5 4549.3 TRUE FALSE 13598.27483 14433.35735 12049.36483 12164.40435 4821.002938 5417.286309 4812.799281 6337.106675 6191.523645 5112.901629 2.659600325 2.822928818 2.356658842 2.379158691 0.942909386 1.059532669 0.941304885 1.2394345 1.210960839 1 12.31992655 -6.196819513 4.13736187 1.06787559 2.594813584 0.960642292 0.147922339 0.044178397 1.513657795 0.049524866 0.064074709 6.36E-07 6.196819513 1.526937994 up VSMPDVELNLKS(ph)PK ddPTM_A459_MK2206_30min_R2 1 VSMPDVELNLKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VSMPDVELNLKS(1)PK 90.379 0.010077 80641000 157040 147680 115530 98262 89803 45401 86701 60920 55557 86982 TRUE FALSE 169063.1031 140346.4259 119381.7125 90233.68028 86276.883 47128.76687 75317.05455 68882.45317 60389.24744 84143.78446 2.009216774 1.667935746 1.418782306 1.072374874 1.025350637 0.560098018 0.895099442 0.818627943 0.717691126 1 16.36056909 -5.38920554 0.896696188 0.79129693 2.151972968 0.914001939 0.125194624 0.267787916 0.305207973 0.047613044 0.299011227 4.08E-06 5.38920554 1.360676038 up VSNGS(ph)PSLER ddPTM_A459_MK2206_30min_R1 2 VSNGSPSLER 10 0 P46527;E7ES52 P46527 CDKN1B Cyclin-dependent kinase inhibitor 1B 1 VS(0.014)NGS(0.985)PS(0.001)LER;VS(0.005)NGS(0.995)PSLER 155.88 0.00051797 34804000 3005.7 2842.2 3073.9 2689.7 3307.5 2970.9 3666.4 2955.9 2571.8 2342.8 TRUE FALSE 2750.049431 2657.172263 2865.252232 2896.86116 3175.755271 3139.109791 3421.821146 2930.056878 2839.147813 2633.043751 1.044437423 1.009163734 1.088190134 1.100194844 1.206115648 1.192198113 1.299568662 1.1128022 1.078275973 1 11.36251578 -5.747082004 1.932209985 1.162389577 1.029682069 0.247755877 0.07756952 0.410035573 3.119506465 0.024234578 0.049289125 1.79E-06 5.747082004 -0.132707508 VSNGS(ph)PSLER ddPTM_A459_MK2206_30min_R2 2 VSNGSPSLER 10 0 P46527;E7ES52 P46527 CDKN1B Cyclin-dependent kinase inhibitor 1B 1 VS(0.005)NGS(0.992)PS(0.003)LER;VS(0.003)NGS(0.893)PS(0.104)LER 130.69 0.0027371 53530000 41439 63073 55451 61034 48054 56558 52616 48183 37878 55258 TRUE FALSE 44611.6017 59940.88654 57299.70866 56047.32696 46167.15851 58710.35432 45707.456 54480.68354 41172.55997 53454.93599 0.834564683 1.121334923 1.071925494 1.048496756 0.863665023 1.098314931 0.855065209 1.019189015 0.770229338 1 15.70603555 -7.287960811 1.221759066 0.90720166 1.013769935 0.101113194 0.112969031 1.01233326 2.931059648 0.072305712 0.040482991 5.15E-08 7.287960811 0.106568275 VSNLQVS(ph)PK ddPTM_A459_MK2206_30min_R2 2 VSNLQVSPK 9 0 O00443;A0A0C4DGF9;O00443-2 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha 1 VSNLQVS(1)PK;VSNLQVS(1)PK 112.5 0.0096587 44053000 238110 240660 240890 190846 182983 136123 198433 159232 146167 193332 TRUE FALSE 256339.8847 228709.1744 248921.1524 175253.2713 175798.168 141303.2562 172378.5087 180044.1691 158880.3415 187023.5927 1.370628598 1.222889428 1.330961238 0.937065045 0.939978564 0.755537064 0.921693923 0.962681588 0.849520315 1 17.51286075 -5.79040075 6.084518704 0.90135493 1.300674118 0.864912888 0.072173981 0.055627129 6.151008067 0.020148645 0.031198061 1.62E-06 5.79040075 0.399319189 VSNQDSKS(ph)PLGFYCDQNPVESSMCQSNSR ddPTM_A459_MK2206_30min_R1 2 VSNQDSKSPLGFYCDQNPVESSMCQSNSR 29 1 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VS(0.006)NQDS(0.273)KS(0.703)PLGFY(0.018)CDQNPVESSMCQSNSR;VS(0.008)NQDS(0.143)KS(0.784)PLGFY(0.065)CDQNPVESSMCQSNSR 118.85 7.75E-14 11878300 2579.5 2924.37 2811.89 2649.69 2348.55 2077.52 2337.94 2553.76 2193.46 1652.94 TRUE FALSE 2360.09998 2733.992981 2621.026741 2853.769583 2255.00228 2195.147387 2181.980288 2531.432746 2421.478016 1857.718686 1.270429154 1.471693751 1.41088463 1.536168853 1.213855627 1.181636059 1.17454828 1.362656663 1.303468622 1 10.85931634 -6.281728931 24.03097526 1.221366808 1.425007678 0.483940524 0.108703316 452.2967092 535699.1754 0.033414618 0.037941617 5.23E-07 6.281728931 0.20364087 VSNQDSKS(ph)PLGFYCDQNPVESSMCQSNSR ddPTM_A459_MK2206_30min_R2 4 VSNQDSKSPLGFYCDQNPVESSMCQSNSR 29 1 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VS(0.108)NQDS(0.213)KS(0.496)PLGFY(0.183)CDQNPVESSMCQSNSR;VS(0.024)NQDS(0.27)KS(0.652)PLGFY(0.054)CDQNPVESSMCQSNSR;VS(0.001)NQDS(0.08)KS(0.744)PLGFY(0.175)CDQNPVESSMCQSNSR;VS(0.001)NQDS(0.104)KS(0.864)PLGFY(0.029)CDQNPVESSMCQSNSR 88.341 1.69E-06 85366000 120145 178332 164627 174618 196524 151355 195033 155028 153923 164171 TRUE FALSE 129343.3936 169476.2922 170115.582 160351.1508 188807.4803 157114.9206 169424.9328 175290.6919 167310.9443 158814.1137 0.814432613 1.067136215 1.071161612 1.009678215 1.188858319 0.989300742 1.066812822 1.103747569 1.053501735 1 17.2769796 -4.76114369 24.9920795 1.065004734 0.814432333 0.645279756 0.054805557 4.106566142 346521.7079 0.012793862 0.072524259 1.73E-05 4.76114369 -0.250572401 VSNS(ph)PEPQK ddPTM_A459_MK2206_30min_R1 4 VSNSPEPQK 9 0 O60271;O60271-3;D6RHI8 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 VSNS(1)PEPQK;VSNS(1)PEPQK;VS(0.001)NS(0.999)PEPQK;VS(0.08)NS(0.92)PEPQK 167.11 0.00086177 120985200 29941.3 31242.9 26489.4 22400.3 18889.1 17992.3 27403.7 26062.2 1335.24 22387.6 TRUE FALSE 27394.63521 29208.98153 24691.37333 24125.57499 18136.70715 19011.00848 25575.64917 25834.34093 1474.042976 25161.14491 1.088767435 1.160876488 0.981329483 0.958842496 0.720822014 0.755570088 1.016473983 1.026755381 0.058584098 1 14.61890995 -5.817936397 1.477915838 0.775138883 1.125588542 0.22652308 0.26515326 0.660769691 2.925863104 0.087949166 0.189216813 1.52E-06 5.817936397 0.350449658 VSNS(ph)PEPQK ddPTM_A459_MK2206_30min_R2 5 VSNSPEPQK 9 0 O60271;O60271-3;D6RHI8 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 VSNS(1)PEPQK;VS(0.016)NS(0.984)PEPQK;VS(0.004)NS(0.996)PEPQK;VS(0.076)NS(0.924)PEPQK;VS(0.004)NS(0.996)PEPQK 117.79 0.0074193 196456100 354333 356184 341843 349734 373400 302632 404517 334230 301807 381044 TRUE FALSE 381461.0069 338496.4205 353239.875 321159.6135 358738.4398 314148.8728 351403.432 377915.0086 328057.6273 368610.5655 1.034861837 0.91830363 0.958301004 0.871270776 0.973218007 0.852251406 0.953318936 1.025241933 0.88998433 1 18.4917379 -10.58165428 4.79258326 1.00000026 0.940651802 0.083470442 0.0576702 1.09E-06 2.13E-07 0.05373953 0.013033349 2.62E-11 10.58165428 -0.059348458 VSNS(ph)PEPQKAVEQEDELSDVSQGGSK ddPTM_A459_MK2206_30min_R1 2 VSNSPEPQKAVEQEDELSDVSQGGSK 26 1 O60271;O60271-3;D6RHI8 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 VS(0.067)NS(0.933)PEPQKAVEQEDELSDVSQGGSK;VS(0.27)NS(0.73)PEPQKAVEQEDELSDVSQGGSK 119.52 4.25E-09 31367000 3065.45 3110.9 3571.96 4249.6 3592.2 2206.9 1950.79 3788.41 1771.27 686.95 TRUE FALSE 2804.71738 2908.379845 3329.505307 4576.904928 3449.115067 2331.852771 1820.656359 3755.288331 1955.399855 772.0545522 3.632796895 3.767065211 4.312525971 5.928214419 4.467449946 3.020321251 2.35819652 4.864019414 2.532722396 1 9.59255898 -9.057381355 0.423579159 0.714374218 4.359686448 0.507486533 0.943730293 2.152133468 0.711712223 2.260949962 0.68955028 8.76E-10 9.057381355 3.64531223 VSNS(ph)PEPQKAVEQEDELSDVSQGGSK ddPTM_A459_MK2206_30min_R2 2 VSNSPEPQKAVEQEDELSDVSQGGSK 26 1 O60271;O60271-3;D6RHI8 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 VS(0.304)NS(0.696)PEPQKAVEQEDELSDVSQGGSK;VS(0.234)NS(0.766)PEPQKAVEQEDELSDVSQGGSK 112.13 8.45E-09 16021100 14525.4 53671 35807 40203 68331 40905 52020 29235 59785 30062 TRUE FALSE 15637.47579 51005.77618 37000.78751 36918.2863 65647.9816 42461.66844 45189.71151 33056.11488 64984.99123 29081.0794 0.537719924 1.753916197 1.272331986 1.269495048 2.257412137 1.460113218 1.553921396 1.136688031 2.23461414 1 14.8277932 -4.754560831 24.98729457 1.555169959 0.53771817 0.358101432 0.405989465 256.5126847 931735.6014 0.095861558 0.924316878 1.76E-05 4.754560831 -1.017451789 VSNS(ph)PPLGR ddPTM_A459_MK2206_30min_R1 1 VSNSPPLGR 9 0 H0Y9Y2 H0Y9Y2 BOD1L1 1 VS(0.058)NS(0.942)PPLGR 91.123 0.027636 13254000 1305.1 1216.1 1257.7 980.2 1465.6 1173.7 1477.9 1124.2 998.94 1163 TRUE FALSE 1194.094392 1136.931669 1172.330828 1055.695174 1407.222049 1240.15388 1379.311988 1114.371238 1102.783388 1307.08122 0.913557913 0.869824806 0.896907407 0.807673737 1.076614082 0.948796341 1.055261116 0.852564646 0.843699206 1 10.35213308 -6.237389626 24.93274614 0.959371442 0.873615997 0.260451204 0.074827504 1214.408706 1258995.738 0.022986636 0.029658338 5.79E-07 6.237389626 -0.085755444 VSPAS(ph)PAGSPSADFAVHGESLGDR ddPTM_A459_MK2206_30min_R1 2 VSPASPAGSPSADFAVHGESLGDR 24 0 Q96C92-4;A0A0A0MRP9;Q96C92-3;Q96C92-2;Q96C92 Q96C92-4 SDCCAG3 Serologically defined colon cancer antigen 3 1 VS(0.193)PAS(0.804)PAGS(0.003)PSADFAVHGESLGDR;VS(0.034)PAS(0.965)PAGS(0.001)PSADFAVHGESLGDR 194.26 3.90E-27 24328000 4734.9 4106 5065.5 3920.3 4982.7 4516.2 4065.7 4171.7 3623.3 3207.6 TRUE FALSE 4332.171891 3838.698654 4721.667973 4222.242185 4784.228508 4771.903341 3794.484571 4135.227267 3999.955001 3604.981704 1.201718135 1.06483166 1.30976198 1.171224303 1.327115891 1.323696965 1.052566943 1.147086894 1.10956319 1 11.81577622 -8.043519903 1.017594545 1.024570886 1.222251399 0.376294258 0.088920395 0.591767118 1.154102491 0.085661155 0.031036626 9.05E-09 8.043519903 0.197680513 VSPAS(ph)PAGSPSADFAVHGESLGDR ddPTM_A459_MK2206_30min_R2 1 VSPASPAGSPSADFAVHGESLGDR 24 0 Q96C92-4;A0A0A0MRP9;Q96C92-3;Q96C92-2;Q96C92 Q96C92-4 SDCCAG3 Serologically defined colon cancer antigen 3 1 VS(0.008)PAS(0.992)PAGSPSADFAVHGESLGDR 185.67 2.78E-26 11069000 16022 18649 16307 24315 23504 20425 22742 14600 16074 14857 TRUE FALSE 17248.65664 17722.91778 16850.66724 22328.38672 22581.11486 21202.28769 19755.94808 16508.27013 17472.08746 14372.21731 1.20013887 1.233137337 1.172447291 1.553579816 1.571164308 1.475227325 1.374592915 1.148623749 1.215684893 1 13.81099503 -8.14879869 1.429248895 1.043926841 1.373684204 0.392741925 0.140383057 0.472738315 1.770067058 0.147265392 0.046855429 7.10E-09 8.14879869 0.329757363 VSPGLPS(ph)PNLENGAPAVGPVQPR ddPTM_A459_MK2206_30min_R1 1 VSPGLPSPNLENGAPAVGPVQPR 23 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 VS(0.001)PGLPS(0.999)PNLENGAPAVGPVQPR 134.4 6.11E-06 23638000 2689.4 2198.3 2145.5 1849.7 2160.3 2160.1 1827.1 1603.3 1773 1619.9 TRUE FALSE 2460.652407 2055.19027 1999.869438 1992.164214 2074.250676 2282.402995 1705.217493 1589.282517 1957.309695 1820.585442 1.351572055 1.128862301 1.098476013 1.094243736 1.139331684 1.253664312 0.936631401 0.872951349 1.075099059 1 10.83018673 -7.272638018 24.69325636 0.960583047 1.166334729 0.568409574 0.087632876 483.8712699 1066942.775 0.036907985 0.025138449 5.34E-08 7.272638018 0.205751682 VSPGLPS(ph)PNLENGAPAVGPVQPR ddPTM_A459_MK2206_30min_R2 4 VSPGLPSPNLENGAPAVGPVQPR 23 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 VS(0.104)PGLPS(0.896)PNLENGAPAVGPVQPR;VS(0.014)PGLPS(0.986)PNLENGAPAVGPVQPR;VS(0.004)PGLPS(0.996)PNLENGAPAVGPVQPR;VSPGLPS(1)PNLENGAPAVGPVQPR 168 3.05E-12 69228000 153450 163106 148538 163305 184140 147014 167096 118339 129081 136429 TRUE FALSE 165198.25 155006.3932 153490.1828 149962.4591 176909.7384 152608.7208 145156.0945 133806.3136 140308.2321 131977.3329 1.251716839 1.174492542 1.163004127 1.136274357 1.340455474 1.156325237 1.09985625 1.013858294 1.063123712 1 17.00993064 -7.370079926 2.396212525 1.030530492 1.205849537 0.673454405 0.056481887 0.191611895 2.146518623 0.029121038 0.017667465 4.27E-08 7.370079926 0.175319045 VSPKS(ph)PPTDQK ddPTM_A459_MK2206_30min_R1 1 VSPKSPPTDQK 11 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 VS(0.178)PKS(0.821)PPT(0.001)DQK 129.17 0.012515 12546000 2648.2 3318.8 3701.7 3137.7 2880.1 2258.5 2573.2 2566.8 2517.2 2029.4 TRUE FALSE 2422.956684 3102.745517 3450.438918 3379.366198 2765.379518 2386.374318 2401.546523 2544.358738 2778.871948 2280.817393 1.062319452 1.360365598 1.512808052 1.481646978 1.212451083 1.046280305 1.052932396 1.115546885 1.218366694 1 11.15533523 -6.506241583 4.976516542 1.093926801 1.365556143 0.503184293 0.124967005 0.16459094 11.44579516 0.042851 0.046088371 3.12E-07 6.506241583 0.271629342 VSPKS(ph)PPTDQK ddPTM_A459_MK2206_30min_R2 3 VSPKSPPTDQK 11 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 VS(0.003)PKS(0.996)PPT(0.001)DQK;VSPKS(0.999)PPT(0.001)DQK;VS(0.02)PKS(0.978)PPT(0.002)DQK 83.243 0.02115 42561500 259632 364177 329932 308732 334858 227852 375399 274011 289526 307804 TRUE FALSE 279509.6255 346092.4997 340931.7682 283507.608 321709.7924 236523.0675 326108.6604 309825.1785 314708.4481 297760.3807 0.93870657 1.162318838 1.144987011 0.952133415 1.080431828 0.794340291 1.095205009 1.040518479 1.056918477 1 18.18379228 -5.763116573 24.99993504 1.002880756 1.090035606 0.119026425 0.098026704 88.32364355 1316565.765 0.026997299 0.042553033 1.73E-06 5.763116573 0.08715485 VSPLNLSSVT(ph)P ddPTM_A459_MK2206_30min_R1 1 VSPLNLSSVTP 11 0 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 VSPLNLSSVT(1)P 123.67 0.0088746 3866200 3532.5 2595.1 2656 2771.4 2893.5 2660.7 3181 3037.8 2619.5 2432.2 TRUE FALSE 3232.042325 2426.158518 2475.71812 2984.853708 2778.245768 2811.346535 2968.801294 3011.240835 2891.806399 2733.519298 1.182374065 0.887558584 0.905688912 1.091945358 1.016362229 1.028471442 1.086072923 1.101598528 1.057905975 1 11.41654385 -5.782578008 24.99872044 1.05748227 0.981442262 0.108606424 0.080445372 428.7793137 507076.6312 0.022474898 0.033372664 1.65E-06 5.782578008 -0.076040008 VSPLNLSSVT(ph)P ddPTM_A459_MK2206_30min_R2 1 VSPLNLSSVTP 11 0 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 VSPLNLSSVT(1)P 137.01 0.0068133 0 5996 7441.1 6899.1 6270.2 7545.4 7712 6794.2 5814.4 6864.6 5881.1 TRUE FALSE 6455.05837 7071.585794 7129.112551 5757.904603 7249.129683 8005.485564 5902.113379 6574.362044 7461.6705 5689.200189 1.134616142 1.242984174 1.253095745 1.012076287 1.274191353 1.40713726 1.037424099 1.155586344 1.311549999 1 12.47401013 -10.81651565 4.725691916 0.99990725 1.202014102 0.217748639 0.115514208 0.000113143 1.69E-05 0.112102931 0.027176505 1.53E-11 10.81651565 0.202106852 VSPPAPGS(ph)APETPEDK ddPTM_A459_MK2206_30min_R1 2 VSPPAPGSAPETPEDK 16 0 M0R300;M0R0P8;Q13459-2;Q13459 M0R300 MYO9B Unconventional myosin-IXb 1 VSPPAPGS(1)APETPEDK;VSPPAPGS(0.917)APET(0.083)PEDK 148.33 0.00029156 21377000 5281.5 5890.5 5273.9 5025.4 5129.8 4240.6 5045.4 4872.8 5459.2 4876.4 TRUE FALSE 4832.280691 5507.027379 4915.922362 5412.457179 4925.469203 4480.699107 4708.830572 4830.197623 6026.703376 5480.525247 0.881718535 1.004835692 0.896980151 0.98758001 0.898722108 0.81756746 0.8591933 0.881338449 1.09965799 1 12.42009845 -8.25508264 24.99703547 1.049828999 0.904956192 0.511548974 0.057183716 392.6926468 1544226.558 0.04311303 0.01542258 5.56E-09 8.25508264 -0.144872807 VSPPAPGS(ph)APETPEDK ddPTM_A459_MK2206_30min_R2 4 VSPPAPGSAPETPEDK 16 0 M0R300;M0R0P8;Q13459-2;Q13459 M0R300 MYO9B Unconventional myosin-IXb 1 VSPPAPGS(0.998)APET(0.002)PEDK;VSPPAPGS(0.997)APET(0.002)PEDK;VS(0.001)PPAPGS(0.999)APETPEDK;VS(0.244)PPAPGS(0.756)APETPEDK 161.19 4.86E-05 35288700 141612 189799 145936 152969 150813 119709 168591 124578 128653 172314 TRUE FALSE 152453.9236 180373.8577 150801.4334 140470.9434 144891.3238 124264.6099 146454.7992 140860.7723 139843.0054 166691.4083 0.914587771 1.082082511 0.904674302 0.842700562 0.869218908 0.745476993 0.878598367 0.845039188 0.838933493 1 17.34682022 -5.486079772 5.581497942 0.851247013 0.998863002 0.375833896 0.069812799 0.166228063 13.96533972 0.017381822 0.035453322 3.27E-06 5.486079772 0.147615989 VSPS(ph)KSPSLSPSPPS(ph)PLEK ddPTM_A459_MK2206_30min_R1 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VS(0.083)PS(0.555)KS(0.213)PS(0.047)LS(0.103)PS(0.003)PPS(0.997)PLEK 96.533 0.0032095 77622000 8025.4 9744.7 9129.4 7668.4 7212.8 6440 7292.6 6631.6 7423.4 6916.2 TRUE FALSE 7342.797587 9110.318259 8509.721764 8259.021497 6925.498903 6804.627235 6806.12396 6573.62062 8195.088995 7773.031071 0.944650487 1.17204192 1.094775215 1.06252264 0.890965035 0.875414902 0.875607456 0.845695915 1.054297728 1 12.92426157 -6.223784464 6.033196185 0.911060722 1.079010069 0.43845746 0.079237069 0.166214035 17.64656035 0.02308439 0.029467582 5.97E-07 6.223784464 0.167949347 VSPS(ph)KSPSLSPSPPS(ph)PLEK ddPTM_A459_MK2206_30min_R2 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VS(0.031)PS(0.692)KS(0.272)PS(0.005)LS(0.002)PS(0.004)PPS(0.994)PLEK 93.179 0.0041185 38354000 72952 75101 70830 78510 84794 57759 86285 59200 74980 80363 TRUE FALSE 78537.26121 71371.59355 73191.43685 72095.48186 81464.5615 59957.05922 74955.67585 66937.64326 81501.62487 77740.76189 1.010245582 0.918071702 0.941480828 0.927383269 1.04790022 0.771243525 0.964174701 0.861036625 1.048376976 1 16.24638363 -8.279502845 24.69330989 1.024188506 0.929828784 0.210805204 0.07274556 1230.383505 1681953.211 0.066067108 0.017204423 5.25E-09 8.279502845 -0.094359722 VSPS(ph)KSPSLSPSPPSPLEK ddPTM_A459_MK2206_30min_R1 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VS(0.035)PS(0.475)KS(0.475)PS(0.01)LS(0.003)PSPPSPLEK 69.272 0.0098137 28272000 5435.5 6336.5 6628.8 6243.7 6251.1 6537.8 6666.3 7203.4 6473.9 5359.4 TRUE FALSE 4973.182182 5923.992698 6178.855525 6724.590856 6002.10545 6907.964586 6221.60329 7140.421433 7146.885072 6023.362933 0.825648767 0.983502532 1.025814913 1.116418009 0.996470828 1.146861755 1.032911906 1.185454291 1.186527385 1 12.55635347 -3.786185874 0.66440805 1.10887939 2.80E-10 0.611420197 0.065905226 6.856030586 0.84996891 0.027312896 7.789356914 0.000163612 3.786185874 -1.108879389 VSPS(ph)KSPSLSPSPPSPLEK ddPTM_A459_MK2206_30min_R2 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VS(0.027)PS(0.485)KS(0.485)PS(0.003)LSPSPPSPLEK 99.414 0.00075071 24882000 45532 51842 49406 53764 60247 51991 66596 49294 47414 57364 TRUE FALSE 49017.96493 49267.60167 51053.17138 49371.30922 57881.40006 53969.55394 57851.8652 55736.89505 51537.98402 55492.21738 0.883330442 0.887829032 0.920005972 0.889697899 1.043054374 0.972560775 1.04252214 1.004409225 0.92874256 1 15.75999783 -6.248534383 24.97055978 0.999667968 0.896458924 0.71212723 0.032177123 418.7761093 810311.7781 0.009433689 0.012098743 5.64E-07 6.248534383 -0.103209044 VSPSKS(ph)PSLSPSPPS(ph)PLEK ddPTM_A459_MK2206_30min_R1 2 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VS(0.093)PS(0.146)KS(0.658)PS(0.083)LS(0.017)PS(0.025)PPS(0.979)PLEK;VS(0.063)PS(0.335)KS(0.567)PS(0.018)LS(0.018)PS(0.013)PPS(0.986)PLEK 95.444 0.0034046 143517000 10395.5 12187.8 12211.7 10314.2 8234.3 7874.9 9792.7 9125.7 9362.3 9235.7 TRUE FALSE 9511.308136 11394.372 11382.80383 11108.60147 7906.310395 8320.770033 9139.446851 9045.914967 10335.54459 10379.88824 0.916320861 1.097735519 1.096621039 1.070204342 0.761695137 0.801624241 0.880495689 0.871484813 0.995727926 1 13.34150329 -6.240453295 24.61118767 0.874334406 1.052643013 0.458868512 0.084503388 565.6927938 663409.3608 0.025315201 0.0326445 5.75E-07 6.240453295 0.178308607 VSPSKS(ph)PSLSPSPPS(ph)PLEK ddPTM_A459_MK2206_30min_R2 2 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VS(0.007)PS(0.045)KS(0.915)PS(0.032)LS(0.001)PS(0.087)PPS(0.912)PLEK;VS(0.229)PS(0.314)KS(0.44)PS(0.019)LS(0.152)PS(0.229)PPS(0.618)PLEK 100.23 0.0025473 46881400 190819 243430 239211 226826 243297 175122 255111 217218 195819 224938 TRUE FALSE 205428.2494 231341.6202 247186.1753 208293.5902 233743.9373 181786.3904 221614.6193 245609.1384 212850.9827 217598.2915 0.944071058 1.063159176 1.135974799 0.957239089 1.074199323 0.835421957 1.018457534 1.128727329 0.978183152 1 17.7313077 -3.734076113 21.30971194 1.017207764 0.033214149 0 0.087013609 0 0 0.019928726 0 0.000184469 3.734076113 -0.983993615 VSPSTSYT(ph)PSR ddPTM_A459_MK2206_30min_R2 2 VSPSTSYTPSR 11 0 Q9BTE3;Q9BTE3-2 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 1 VSPSTSYT(1)PSR;VSPSTSYT(0.989)PS(0.011)R 140.45 0.0025372 39481000 65181 78811 60271 85975 81849 108345 84069 64936 66391 81433 TRUE FALSE 70171.30748 74897.36034 62280.40506 78950.56748 78635.197 112468.1449 73030.63932 73423.35816 72165.56917 78775.84788 0.890771847 0.950765525 0.790602789 1.002217934 0.998214543 1.42769831 0.927068909 0.932054178 0.916087495 1 16.26546576 -5.931883716 6.717362996 1.040704128 0.884937507 0.190331018 0.14380351 0.380708652 29.95635164 0.043177195 0.064364781 1.17E-06 5.931883716 -0.155766621 VSPT(ph)ASR ddPTM_A459_MK2206_30min_R2 1 VSPTASR 7 0 P21580;A0A087WU80 P21580 TNFAIP3 Tumor necrosis factor alpha-induced protein 3;A20p50;A20p37 1 VS(0.345)PT(0.655)ASR 114.89 0.031998 0 19876 17724 11907 18150 18297 17617 15948 22948 20865 17625 TRUE FALSE 21397.72184 16843.85193 12303.97344 16667.08694 17578.56784 18287.42728 13854.00844 25947.38239 22679.79998 17049.89769 1.255005879 0.987915132 0.721645001 0.977547622 1.031007233 1.072582816 0.81255669 1.521849741 1.330201529 1 14.05747546 -7.757452701 24.99999984 1.319519228 0.975595344 0.36961444 0.180255325 93.92675448 589015.5792 0.087421896 0.048075406 1.75E-08 7.757452701 -0.343923884 VSQGSAESLS(ph)PSFR ddPTM_A459_MK2206_30min_R1 3 VSQGSAESLSPSFR 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 VSQGSAES(0.006)LS(0.622)PS(0.372)FR;VSQGSAES(0.007)LS(0.992)PS(0.001)FR;VSQGSAES(0.008)LS(0.963)PS(0.028)FR 223.68 3.25E-09 173424000 8497.4 8345.8 8203.3 6514.8 8370.6 6545.9 6900.9 6246.9 5400.1 5382.7 TRUE FALSE 7774.651508 7802.486903 7646.482852 7016.571025 8037.181277 6916.523201 6440.553552 6192.284012 5961.459719 6049.549513 1.285162059 1.289763293 1.263975579 1.159850169 1.32855864 1.143312107 1.064633579 1.023594236 0.985438619 1 12.562612 -7.172805707 1.774995355 1.004418789 1.262269924 0.871017823 0.044780142 0.123241343 0.762752843 0.022835501 0.015199457 6.72E-08 7.172805707 0.257851135 VSQGSAESLS(ph)PSFR ddPTM_A459_MK2206_30min_R2 2 VSQGSAESLSPSFR 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 VSQGSAES(0.032)LS(0.956)PS(0.012)FR;VSQGSAES(0.034)LS(0.483)PS(0.483)FR 188 9.07E-05 170309000 193749 247590 211013 246590 210127 190492 202079 135146 195408 172229 TRUE FALSE 208582.5724 235295.0406 218048.0681 226442.8082 201876.3582 197741.3065 175545.7846 152810.0462 212404.2346 166609.1818 1.251927235 1.412257344 1.308739805 1.359125624 1.211676067 1.186857197 1.053638117 0.91717662 1.27486512 1 17.34610838 -6.766858441 1.519252439 1.056247263 1.33739954 0.610490026 0.095094648 0.247751862 1.189251493 0.040830775 0.036865928 1.71E-07 6.766858441 0.281152277 VSQSALNPHQS(ph)PDFKR ddPTM_A459_MK2206_30min_R1 1 VSQSALNPHQSPDFKR 16 1 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 VSQSALNPHQS(1)PDFKR 75.611 0.015705 17859000 2760.4 2785.3 2807.2 2744.6 2509.7 2162.5 2516.6 2553.2 2429.2 1721.8 TRUE FALSE 2525.613485 2603.976464 2616.655085 2955.989568 2409.733335 2284.938881 2348.722206 2530.877642 2681.724033 1935.109583 1.305152694 1.345648064 1.352199952 1.527556679 1.245269702 1.180780097 1.213741189 1.307873034 1.385825411 1 10.91819955 -6.479176604 24.58921073 1.23401791 1.37889673 0.344820298 0.107641091 489.2955369 275304.2816 0.033172474 0.03761131 3.32E-07 6.479176604 0.14487882 VSQSALNPHQS(ph)PDFKR ddPTM_A459_MK2206_30min_R2 4 VSQSALNPHQSPDFKR 16 1 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 VSQSALNPHQS(1)PDFKR;VSQS(0.001)ALNPHQS(0.999)PDFKR;VSQSALNPHQS(1)PDFKR;VSQSALNPHQS(1)PDFKR 110.34 0.0014443 86473800 104752 127041 109227 128198 115697 121638 127630 103010 101443 103638 TRUE FALSE 112771.8937 120732.3287 112868.5737 117723.8133 111154.1544 126267.0193 110872.0277 116473.7607 110266.3288 100256.3005 1.124835976 1.204236821 1.125800304 1.174228579 1.10869994 1.259442236 1.105885885 1.16176001 1.099844381 1 16.61333338 -8.699399266 1.34620423 0.999875754 1.161286309 0.540716098 0.044800886 0.50006665 1.79116346 0.039723144 0.011880819 2.00E-09 8.699399266 0.161410555 VSRPENEQLR ddPTM_A459_MK2206_30min_R1 2 VSRPENEQLR 10 1 Q8ND56-3;Q8ND56-2;Q8ND56;A0A140TA76;K7EMZ9 Q8ND56-3;A0A140TA76 LSM14A Protein LSM14 homolog A 0 ; 147.3 0.0023384 13073800 4868.8 4464.1 4311.6 4261.9 5273.7 4573.6 4707.1 4203.9 3493.1 3579.3 FALSE TRUE 4454.682993 4173.486279 4018.940605 4590.152276 5063.637362 4832.55328 4393.097948 4167.145746 3856.220245 4022.730706 1.107377878 1.037475929 0.999057829 1.141053829 1.258756236 1.201311654 1.092068614 1.035899753 0.958607604 1 11.97395945 -7.859074282 2.696641683 0.982662287 1.122468631 0.403443575 0.070211016 0.333570622 4.769183933 0.055841028 0.022860732 1.38E-08 7.859074282 0.139806345 VSS(ph)GYVPPPVATPFSSK ddPTM_A459_MK2206_30min_R1 1 VSSGYVPPPVATPFSSK 17 0 Q15942;Q15942-2;H7C3R3 Q15942 ZYX Zyxin 1 VS(0.329)S(0.471)GY(0.2)VPPPVATPFSSK 126.07 0.0011979 15180000 5502.5 6105.2 5433.7 5003.5 5356.3 4825.1 4729.1 4836.5 4067 3926.5 TRUE FALSE 5034.48348 5707.75037 5064.875583 5388.870437 5142.947229 5098.292992 4413.630368 4794.21499 4489.779204 4412.944464 1.140844514 1.293410877 1.147731549 1.221150749 1.165423057 1.155304136 1.00015543 1.086398216 1.017411219 1 12.10752588 -7.087096719 2.712239153 1.032402124 1.198240837 0.735983084 0.047415508 0.142082212 2.041961568 0.018956034 0.014383026 8.18E-08 7.087096719 0.165838713 VSS(ph)GYVPPPVATPFSSK ddPTM_A459_MK2206_30min_R2 2 VSSGYVPPPVATPFSSK 17 0 Q15942;Q15942-2;H7C3R3 Q15942 ZYX Zyxin 1 VS(0.006)S(0.994)GYVPPPVATPFSSK;VS(0.061)S(0.939)GYVPPPVATPFSSK 179.14 8.28E-08 22546000 62941 71062 69100 65176 78057 65671 65827 46051 55041 59277 TRUE FALSE 67759.81135 67533.16441 71403.75951 59850.91231 74992.08998 68170.15592 57183.83583 52070.02382 59828.36669 57342.79634 1.181662138 1.177709647 1.245208885 1.04373899 1.307785716 1.18881813 0.99722789 0.908048214 1.043345817 1 15.80732464 -7.277169403 5.444693552 0.977639172 1.19184889 0.67304875 0.06950661 0.101181483 10.31013063 0.027933515 0.019499525 5.28E-08 7.277169403 0.214209718 VSS(ph)PAGPTEDNDLSR ddPTM_A459_MK2206_30min_R1 2 VSSPAGPTEDNDLSR 15 0 Q86YC2;H3BN63 Q86YC2 PALB2 Partner and localizer of BRCA2 1 VS(0.047)S(0.953)PAGPTEDNDLSR;VS(0.06)S(0.94)PAGPTEDNDLSR 130.47 0.00079443 5879500 2736.8 2843.4 2514.1 2368.7 2253.21 2315 2695.6 2269 2044.03 2179.6 TRUE FALSE 2504.020788 2658.294143 2343.449897 2551.137684 2163.459874 2446.073299 2515.781442 2249.162372 2256.514233 2449.625303 1.022205635 1.085183983 0.956656471 1.041439963 0.883179918 0.998549981 1.027006636 0.91816588 0.921167099 1 11.25834537 -5.486475435 1.529556396 0.96294944 1.053960758 0.266634124 0.051730982 0.590426683 2.561557938 0.015866744 0.053446878 3.26E-06 5.486475435 0.091011317 VSS(ph)PAGPTEDNDLSR ddPTM_A459_MK2206_30min_R2 2 VSSPAGPTEDNDLSR 15 0 Q86YC2;H3BN63 Q86YC2 PALB2 Partner and localizer of BRCA2 1 VS(0.118)S(0.882)PAGPTEDNDLSR;VS(0.005)S(0.994)PAGPTEDNDLSR 166.52 6.18E-06 0 19394.2 24036 22924.1 23736 20802.9 24787.6 26200.7 17263.9 21683.3 20757.9 TRUE FALSE 20879.03486 22842.40719 23688.37805 21796.69287 19986.07362 25730.90949 22760.51662 19520.35101 23569.27424 20080.57142 1.039762984 1.137537708 1.179666532 1.085461784 0.995294068 1.28138333 1.133459608 0.972101371 1.173735236 1 14.2935127 -10.36974068 0.487643329 0.968830839 1.115215366 0.118747011 0.088249149 34.02611595 5.648000053 1.685426514 0.044458671 4.27E-11 10.36974068 0.146384527 VSS(ph)PAPMEGGEEEEELLGPK ddPTM_A459_MK2206_30min_R1 2 VSSPAPMEGGEEEEELLGPK 20 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 VS(0.034)S(0.966)PAPMEGGEEEEELLGPK;VS(0.03)S(0.97)PAPMEGGEEEEELLGPK 193.36 1.08E-15 36340000 14044.1 15406 15373.8 10215.5 11465 10953.4 15546.2 13267.5 15070.6 14612.9 TRUE FALSE 12849.57555 14403.0666 14330.26929 11002.29958 11008.32477 11573.57204 14509.14136 13151.50365 16637.2428 16423.25637 0.782401203 0.876992131 0.872559556 0.669921928 0.670288798 0.704706288 0.883450945 0.800785383 1.013029476 1 14.00345259 -8.155694781 1.678810403 1.017597762 0.772073475 0.561489987 0.078117193 0.307333367 1.559026078 0.079504004 0.024588111 6.99E-09 8.155694781 -0.245524287 VSS(ph)PAPMEGGEEEEELLGPK ddPTM_A459_MK2206_30min_R2 1 VSSPAPMEGGEEEEELLGPK 20 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 VS(0.128)S(0.872)PAPMEGGEEEEELLGPK 81.373 0.0069742 3483400 27708 24865 27127 29157 25833 21754 30849 26159 19265 29318 TRUE FALSE 29829.34578 23630.24026 28031.40064 26774.77983 24818.66662 22581.86371 26798.48924 29578.07112 20940.63488 28361.35606 1.051760209 0.833184429 0.988366021 0.94405852 0.875087445 0.796219464 0.944894496 1.042900454 0.738350974 1 14.79163889 -4.740830479 24.79199631 0.908772251 1.051760782 0.183551191 0.091519242 2493.710275 2999700.191 0.021978788 0.933475685 1.82E-05 4.740830479 0.142988532 VSS(ph)PIEK ddPTM_A459_MK2206_30min_R2 2 VSSPIEK 7 0 Q06190 Q06190 PPP2R3A Serine/threonine-protein phosphatase 2A regulatory subunit B subunit alpha 1 VS(0.013)S(0.987)PIEK;VS(0.029)S(0.971)PIEK 95.502 0.023749 15199900 258770 279950 254300 259960 247330 187103 225970 195320 203505 232030 TRUE FALSE 278581.6302 266048.0901 262778.2351 238720.4364 237618.5815 194223.3358 196299.8676 220848.9946 221205.497 224458.8801 1.241125457 1.185286543 1.170718819 1.063537501 1.058628562 0.865295843 0.874547122 0.983917386 0.985505661 1 17.77609165 -6.028659463 1.289021138 0.940617944 1.216142072 0.819349787 0.051194039 0.188715207 0.636956158 0.020227087 0.036629487 9.36E-07 6.028659463 0.275524128 VSS(ph)PPNAMMSSR ddPTM_A459_MK2206_30min_R1 1 VSSPPNAMMSSR 12 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VS(0.156)S(0.843)PPNAMMSSR 101.72 0.012273 41621000 3316.8 2623.8 2974.3 2783.6 2868.8 2814 3176.4 3192.9 2674.6 2110.8 TRUE FALSE 3034.688743 2452.990143 2772.412803 2997.993354 2754.529621 2973.326248 2964.508152 3164.984812 2952.634241 2372.30184 1.279216958 1.034012663 1.168659382 1.263748695 1.161121058 1.253350732 1.249633627 1.334140858 1.244628399 1 11.21207187 -5.594493837 6.580319661 1.229451684 1.143291489 0.043147113 0.100552309 0.418527912 30.32690617 0.025930055 0.045378809 2.54E-06 5.594493837 -0.086160194 VSS(ph)PPNAMMSSR ddPTM_A459_MK2206_30min_R2 3 VSSPPNAMMSSR 12 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VS(0.12)S(0.88)PPNAMMSSR;VS(0.039)S(0.961)PPNAMMS(0.001)SR;VS(0.231)S(0.769)PPNAMMSSR 116.9 0.0048978 83534000 186904 226835 191951 240996 213494 217626 231435 185600 203759 203153 TRUE FALSE 201213.5139 215570.7037 198350.5505 221305.8559 205111.1528 225907.9099 201047.3065 209858.5573 221481.5895 196524.1342 1.023861597 1.096917203 1.009293598 1.126100144 1.043694474 1.14951739 1.023015861 1.067851326 1.126994353 1 17.58434697 -4.742644583 23.80661298 1.073425804 1.023861301 0.074480541 0.049946402 1782.670062 2257813.727 0.011461196 0.363229466 1.81E-05 4.742644583 -0.049564503 VSS(ph)PSPATDGK ddPTM_A459_MK2206_30min_R2 2 VSSPSPATDGK 11 0 A0A0A0MQS0;F8W9L8;A8MW92-4;A8MW92 A0A0A0MQS0 PHF20L1 PHD finger protein 20-like protein 1 1 VS(0.036)S(0.964)PSPATDGK;VS(0.308)S(0.69)PS(0.002)PATDGK 161.93 0.0006014 29137000 379680 404750 368000 352860 269040 225850 280890 213030 187316 250730 TRUE FALSE 408748.5927 384650.7036 380268.9363 324030.2093 258476.1378 234444.88 244008.8056 240873.7524 203608.4071 242548.7006 1.685222768 1.585869982 1.567804467 1.335938755 1.065666965 0.966588893 1.006019842 0.993094384 0.839453712 1 17.88791493 -6.057219742 1.398520395 0.955123857 1.64826182 0.972765449 0.048419776 0.060468365 0.239125755 0.017385761 0.029481099 8.77E-07 6.057219742 0.693137963 VSS(ph)PSPELGTTPASIFR ddPTM_A459_MK2206_30min_R1 3 VSSPSPELGTTPASIFR 17 0 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 VS(0.131)S(0.834)PS(0.035)PELGTTPASIFR;VS(0.01)S(0.986)PS(0.004)PELGTTPASIFR;VS(0.084)S(0.906)PS(0.01)PELGTTPASIFR 233.47 9.76E-17 39336000 4433.2 4590 4681 3964.07 4671.3 4360.1 4480.8 3839.22 4199.6 3788.16 TRUE FALSE 4056.13306 4291.190166 4363.266762 4269.383358 4485.232229 4606.965094 4181.894008 3805.654104 4636.163448 4257.46586 0.952710648 1.007921216 1.024850675 1.0027992 1.053498108 1.082090907 0.982249569 0.893877774 1.088949061 1 12.05577925 -4.765654628 4.364905028 1.014402467 0.947373571 0.113485957 0.052611571 0.519831427 20.92275592 0.013512281 0.110214486 1.72E-05 4.765654628 -0.067028896 VSS(ph)PSPELGTTPASIFR ddPTM_A459_MK2206_30min_R2 2 VSSPSPELGTTPASIFR 17 0 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 VS(0.135)S(0.526)PS(0.339)PELGTTPASIFR;VS(0.001)S(0.999)PS(0.001)PELGTTPASIFR 207.08 5.52E-09 17694500 19133.4 27669.8 20157 25008.4 26088.6 26662.4 24824.1 16504.7 21248.3 25672.2 TRUE FALSE 20598.26782 26295.75797 20829.02432 22965.13372 25064.23048 27677.05632 21564.66585 18661.92096 23096.43873 24834.51822 0.829420874 1.058839062 0.838712639 0.924726364 1.009249717 1.11445916 0.868334375 0.751450896 0.930013561 1 14.60005914 -7.455133644 24.99998935 0.86641401 0.964189416 0.101469981 0.102049465 316.9224802 116953.5369 0.042379767 0.028572418 3.51E-08 7.455133644 0.097775407 VSS(ph)PVFGATSSIK ddPTM_A459_MK2206_30min_R1 1 VSSPVFGATSSIK 13 0 F6Q6H0;I6L8A6;Q99708-3;Q99708;Q99708-2 F6Q6H0 RBBP8 DNA endonuclease RBBP8 1 VSS(1)PVFGATSSIK 231.69 3.26E-13 40982000 3941.4 3687.5 3749.1 2939.6 3742.6 3065.6 3503.9 3388.4 3429.7 3168 TRUE FALSE 3606.163233 3447.44308 3494.621538 3166.008501 3593.524317 3239.171623 3270.161224 3358.775576 3786.229588 3560.475757 1.012831846 0.968253491 0.981504095 0.889209397 1.009282063 0.90975809 0.918461871 0.943350216 1.063405524 1 11.79785431 -8.251093744 24.601927 1.031702763 0.952480738 0.360844109 0.041278385 519.657947 1235754.952 0.028239951 0.010402734 5.61E-09 8.251093744 -0.079222025 VSS(ph)QAEDTSSSFDNLFIDR ddPTM_A459_MK2206_30min_R1 2 VSSQAEDTSSSFDNLFIDR 19 0 H8Y6P7;P0CAP2-3;P0CAP2;Q9BZD3 H8Y6P7 GCOM1;POLR2M;GCOM2 DNA-directed RNA polymerase II subunit GRINL1A;Putative GRINL1B complex locus protein 2 1 VS(0.008)S(0.992)QAEDTSSSFDNLFIDR;VS(0.002)S(0.998)QAEDTSSSFDNLFIDR 321.67 3.72E-135 18225100 2796.1 2902.2 2677.1 1687.42 1937.73 1834.43 1658.44 1533.5 1256.4 1680.01 TRUE FALSE 2558.277012 2713.266253 2495.385911 1817.385381 1860.546111 1938.293841 1547.808494 1520.092771 1387.007276 1888.142322 1.354917467 1.437003038 1.321609013 0.962525631 0.985384464 1.026561302 0.819752026 0.805073195 0.734588309 1 10.8827518 -5.817634066 1.007793636 0.853515658 1.456514004 0.833336345 0.095183615 0.24028783 0.47111556 0.039379335 0.108446298 1.52E-06 5.817634066 0.602998346 VSS(ph)QAEDTSSSFDNLFIDR ddPTM_A459_MK2206_30min_R2 1 VSSQAEDTSSSFDNLFIDR 19 0 H8Y6P7;P0CAP2-3;P0CAP2;Q9BZD3 H8Y6P7 GCOM1;POLR2M;GCOM2 DNA-directed RNA polymerase II subunit GRINL1A;Putative GRINL1B complex locus protein 2 1 VS(0.146)S(0.854)QAEDTSSSFDNLFIDR 187.73 2.55E-15 3407500 22114 21483 18732 19335 13283 13920 12857 12723 11303 9966.3 TRUE FALSE 23807.06484 20416.18546 19356.51553 17755.26865 12761.44268 14449.73535 11168.86046 14385.93978 12286.11451 9641.100447 2.469330651 2.117619827 2.007708107 1.841622618 1.323650007 1.498764112 1.158463239 1.49214707 1.274347734 1 13.23498211 -2.579382309 0.264561956 1.065682018 7.041246106 0.911849895 0.132915941 8.068217045 0.183278695 0.165883327 19.52293489 0.002634012 2.579382309 5.975564088 up VSS(ph)SAGNAAVIK ddPTM_A459_MK2206_30min_R2 1 VSSSAGNAAVIK 12 0 Q9ULD2-2 Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 VS(0.002)S(0.499)S(0.499)AGNAAVIK 161.21 0.00047994 6266000 41080 32659 34823 38834 26912 24309 42335 30244 23160 37587 TRUE FALSE 44225.11639 31037.20155 35983.98144 35661.13798 25855.29966 25234.09603 36776.36365 34196.99464 25174.41494 36360.53927 1.216294293 0.853595743 0.989643778 0.980764826 0.711081303 0.693996749 1.011436144 0.940497455 0.692355379 1 15.15008598 -2.284187427 1.236375458 0.863624643 199.9999913 0.381132081 0.127153729 960.3956765 3.342915056 0.038295047 540276.0059 0.005197716 2.284187427 199.1363667 VSS(ph)SGLTDSLFILK ddPTM_A459_MK2206_30min_R1 1 VSSSGLTDSLFILK 14 0 Q6P3S1 Q6P3S1 DENND1B DENN domain-containing protein 1B 1 VS(0.151)S(0.804)S(0.045)GLTDSLFILK 148.85 0.00019991 0 628.77 356.86 648.19 362.09 441.21 613.01 374.14 473.96 621.38 497.03 TRUE FALSE 575.2898097 333.6283491 604.1926688 389.9782345 423.6356714 647.7180964 349.1818033 469.8162177 685.9746746 558.6058288 1.02986718 0.597251822 1.081608243 0.698127757 0.758380328 1.159526204 0.625095166 0.841051406 1.228012024 1 9.125686817 -8.245470246 23.90791261 1.114005981 0.843090437 0.240663843 0.188163586 524.1431351 784716.9519 0.120201379 0.045053701 5.68E-09 8.245470246 -0.270915545 VSS(ph)VFY(ph)T(ph)T(ph)IVPMLNPQS(ph)IA ddPTM_A459_MK2206_30min_R2 2 VSSVFYTTIVPMLNPQSIA 19 0 Q6IF36 Q6IF36 OR8G2 Olfactory receptor 8G2 5 VS(0.146)S(0.981)VFY(0.934)T(0.942)T(0.998)IVPMLNPQS(1)IA;VS(0.188)S(0.934)VFY(0.934)T(0.944)T(1)IVPMLNPQS(1)IA 46.701 0.033797 4697700 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 VSSDNVADLHEK ddPTM_A459_MK2206_30min_R1 2 VSSDNVADLHEK 12 0 P28074;P28074-3 P28074 PSMB5 Proteasome subunit beta type-5 0 ; 107.99 0.011587 14477000 6824.8 7525.1 7626.5 6684.3 7908.2 7008 8413.1 7769.7 6852.7 6200.9 FALSE TRUE 6244.314922 7035.214622 7108.834429 7199.125944 7593.199648 7404.786904 7851.87745 7701.770332 7565.062688 6969.114306 0.89599835 1.009484751 1.020048476 1.033004429 1.089550166 1.062514773 1.12666791 1.105129001 1.085512786 1 12.7667596 -3.337528769 0.590335569 1.085952648 2.14E-11 0.70532274 0.034513565 8.964206799 0.621833136 0.015702061 9.689616577 0.000459697 3.337528769 -1.085952648 VSSGYSS(ph)PTTSEMSIK ddPTM_A459_MK2206_30min_R1 1 VSSGYSSPTTSEMSIK 16 0 Q96AY4;A0A087WW06 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 VSS(0.002)GYS(0.008)S(0.706)PT(0.075)T(0.207)S(0.003)EMSIK 178.67 4.27E-09 0 1410.5 1347.3 1555.5 1111.2 1447.9 1086.5 1343.9 1464.5 1645.5 1276.2 TRUE FALSE 1290.529568 1259.590525 1449.916994 1196.784817 1390.227077 1148.016691 1254.250883 1451.696031 1816.555613 1434.305291 0.89975933 0.878188579 1.010884505 0.834400336 0.969268597 0.800399119 0.874465772 1.012124852 1.266505552 1 10.48613642 -7.991364116 4.733843064 1.13785235 0.897504507 0.572096749 0.082622196 0.119025369 7.116014183 0.049089856 0.020525603 1.02E-08 7.991364116 -0.240347843 VSSGYSS(ph)PTTSEMSIK ddPTM_A459_MK2206_30min_R2 1 VSSGYSSPTTSEMSIK 16 0 Q96AY4;A0A087WW06 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 VSSGYS(0.028)S(0.967)PT(0.002)T(0.002)S(0.001)EMSIK 106.14 0.0035453 3118400 15991 16877 18315 18828 18439 18808 23164 16277 17998 21894 TRUE FALSE 17215.28325 16038.91272 18925.61296 17289.69217 17714.99221 19523.75162 20122.53898 18404.45979 19563.43351 21179.60057 0.812823792 0.757281171 0.893577426 0.816337027 0.836417672 0.921818688 0.950090579 0.868971052 0.923692278 1 14.37038776 -1.522878752 0.102376978 1.065802715 0.226846299 0.685089214 0.03918768 72.09368913 0.52324164 0.473190934 8.502287202 0.03 1.522878752 -0.838956417 VSSPLS(ph)PLSPGIK ddPTM_A459_MK2206_30min_R2 1 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VSS(0.074)PLS(0.549)PLS(0.377)PGIK 180.3 0.00011186 10569000 49216 57705 48407 48468 44117 31489 45824 30695 29681 43125 TRUE FALSE 52984.0148 54839.45361 50020.86522 44508.00936 42384.74491 32687.33596 39807.25376 34706.94189 32262.59973 41717.83478 1.270056681 1.314532595 1.199028317 1.066882056 1.015986211 0.783533856 0.954202297 0.831944948 0.77335269 1 15.34837666 -6.014261175 1.141797137 0.860971098 1.305013492 0.84230735 0.073263414 0.175173952 0.465162567 0.027684474 0.0541718 9.68E-07 6.014261175 0.444042393 VSSPLSPLS(ph)PGIK ddPTM_A459_MK2206_30min_R1 2 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VS(0.005)S(0.144)PLS(0.127)PLS(0.724)PGIK;VSSPLS(0.011)PLS(0.989)PGIK 132.06 0.0014615 22907000 6245.4 7046.2 6442.9 5520.7 4764.2 4613 4919.9 4751.6 4666 4411.7 TRUE FALSE 5714.195934 6587.491099 6005.573899 5945.905271 4574.431826 4874.184074 4591.702448 4710.057262 5151.047397 4958.254703 1.152461154 1.328590703 1.211227389 1.199193189 0.922589117 0.98304431 0.926072322 0.94994258 1.038883177 1 12.27561667 -6.194571989 4.960225644 0.966043466 1.234042795 0.849097456 0.052201387 0.074903865 3.630061647 0.015251934 0.019732647 6.39E-07 6.194571989 0.267999329 VSSPLSPLS(ph)PGIK ddPTM_A459_MK2206_30min_R2 1 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VSSPLS(0.274)PLS(0.726)PGIK 150.9 0.00047993 9120700 70002 64147 65505 56760 71146 46923 63167 43240 46706 54409 TRUE FALSE 75361.40694 60961.55326 67688.90401 52122.52643 68352.45056 48708.68765 54873.09702 48891.61647 50768.40345 52633.63879 1.431810695 1.158224183 1.286038845 0.990289245 1.298645736 0.925428847 1.042548041 0.928904358 0.964561916 1 15.68369752 -2.214752513 0.285883244 0.940464572 3.345459383 0.600219495 0.107844114 23.44654419 0.474597042 0.111668011 26.2823001 0.006098843 2.214752513 2.404994811 VSSPLSPLSPGIKS(ph)PTIPR ddPTM_A459_MK2206_30min_R1 2 VSSPLSPLSPGIKSPTIPR 19 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VSSPLSPLSPGIKS(0.991)PT(0.009)IPR;VSSPLS(0.001)PLS(0.003)PGIKS(0.978)PT(0.019)IPR 166.93 3.41E-09 273040000 4556.8 3757.1 3755.6 3351.1 5680.2 5116.5 4884.1 5111.7 3750.5 2842.1 TRUE FALSE 4169.220231 3512.512107 3500.680336 3609.202303 5453.945606 5406.191808 4558.290601 5067.008946 4140.377896 3194.200805 1.305246754 1.099652878 1.095948736 1.129923422 1.70745233 1.692502175 1.427051986 1.586315093 1.29621716 1 11.6412393 -6.238310122 24.5185063 1.491724275 1.149136866 0.324921716 0.20248783 627.2375606 664911.8618 0.05780913 0.074577712 5.78E-07 6.238310122 -0.342587409 VSSPLSPLSPGIKS(ph)PTIPR ddPTM_A459_MK2206_30min_R2 2 VSSPLSPLSPGIKSPTIPR 19 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VSSPLSPLSPGIKS(0.991)PT(0.009)IPR;VSSPLSPLSPGIKS(0.5)PT(0.5)IPR 152.09 1.02E-05 189343000 121050 190112 176009 198468 176275 167173 202444 174247 168796 175825 TRUE FALSE 130317.6811 180671.3145 181877.0522 182252.5295 169353.5578 173534.8857 175862.8596 197021.6812 183477.571 170087.8446 0.766178685 1.062223552 1.069312464 1.071520013 0.995682896 1.02026624 1.033953132 1.158352507 1.078722417 1 17.37592052 -4.760796914 24.99999664 1.056849609 0.766178351 0.788752681 0.044739826 7.266491165 282542.6913 0.011841001 0.068459149 1.73E-05 4.760796914 -0.290671258 VSSS(ph)AGNAAVIK ddPTM_A459_MK2206_30min_R2 1 VSSSAGNAAVIK 12 0 Q9ULD2-2 Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 VS(0.006)S(0.394)S(0.6)AGNAAVIK 192.4 0.00014892 7372300 81523 72451 80689 77799 56021 54070 94008 60888 47620 90928 TRUE FALSE 87764.46356 68853.18869 83379.13099 71442.57283 53821.33406 56127.67174 81664.63668 68846.27066 51761.90152 87961.02681 0.997765337 0.782769269 0.947909933 0.812207127 0.611877055 0.63809705 0.92841841 0.782690621 0.588464044 1 16.42457683 -5.991304709 11.3109017 0.746452215 0.894099533 0.197541302 0.133999905 0.500402847 619.0095738 0.037505159 0.054630523 1.02E-06 5.991304709 0.147647318 VSSS(ph)PGVK ddPTM_A459_MK2206_30min_R1 3 VSSSPGVK 8 0 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 VS(0.011)S(0.363)S(0.626)PGVK;VS(0.007)S(0.142)S(0.85)PGVK;VSS(0.024)S(0.976)PGVK 123.86 0.0057027 32220700 25871 26118.7 22913.3 20905.3 17645.7 15683.1 24306.8 21790.4 7726 20660.8 TRUE FALSE 23670.5356 24418.36788 21358.00904 22515.42983 16942.8344 16571.06357 22685.33772 21599.88883 8529.145348 23220.41589 1.019384653 1.051590463 0.919794423 0.969639387 0.729652496 0.71364198 0.976956564 0.93021111 0.367312342 1 14.50310619 -6.18092514 5.571799469 0.788993943 0.992459003 0.25179345 0.172229778 0.342628746 18.07215987 0.050951508 0.06610492 6.59E-07 6.18092514 0.203465059 VSSS(ph)PGVK ddPTM_A459_MK2206_30min_R2 2 VSSSPGVK 8 0 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 VS(0.014)S(0.01)S(0.975)PGVK;VS(0.004)S(0.078)S(0.918)PGVK 110.53 0.011984 60153000 283780 288630 290300 283920 267770 201279 301430 258880 197622 263150 TRUE FALSE 305506.415 274297.0539 299978.4571 260722.8278 257256.0044 208938.8134 261851.8789 292716.5049 214810.8043 254563.4371 1.20011899 1.077519447 1.178403547 1.024195897 1.010577196 0.820773069 1.028631142 1.149876464 0.843839975 1 17.95766569 -5.910115041 3.554030682 0.979991905 1.14463029 0.41802584 0.092563059 0.249854728 6.198130908 0.027336455 0.042265191 1.23E-06 5.910115041 0.164638385 VSSS(ph)PQKEGR ddPTM_A459_MK2206_30min_R2 1 VSSSPQKEGR 10 1 Q7Z5J4-3;Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2 Q7Z5J4-3 RAI1 Retinoic acid-induced protein 1 1 VSS(0.131)S(0.869)PQKEGR 145.23 0.0043158 4928300 9976.6 19403 15761 17991 21276 15031 19640 14518 19601 15541 TRUE FALSE 10740.41617 18439.47523 16286.46387 16521.07775 20440.59734 15603.01524 17061.24441 16415.55245 21305.85955 15033.89844 0.714413245 1.226526526 1.083316076 1.098921734 1.359633858 1.03785557 1.134851647 1.091902577 1.417187939 1 13.87593154 -4.756318598 24.99876135 1.161158425 0.714412552 0.519959991 0.128768604 125.3470031 611854.0608 0.030348049 0.248685875 1.75E-05 4.756318598 -0.446745873 VSSSS(ph)PQSGCPSPTIPAGK ddPTM_A459_MK2206_30min_R2 1 VSSSSPQSGCPSPTIPAGK 19 0 E7EWD6;Q76L83;A0A5F9ZHC8 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 VS(0.019)S(0.022)S(0.083)S(0.876)PQSGCPSPTIPAGK 242.1 5.71E-30 3270900 19313 19714 17268 25301 20928 21123 27186 20322 18256 24980 TRUE FALSE 20791.61813 18735.03143 17843.7065 23233.82737 20106.26157 21926.85057 23616.44554 22978.15518 19843.87388 24164.90465 0.860405552 0.775299208 0.738414108 0.961469855 0.832043903 0.907384113 0.977303486 0.950889545 0.821185689 1 14.56062568 -5.763432785 24.99999911 0.917435454 0.789765575 0.482745699 0.061605467 44.92281962 563405.3272 0.017083376 0.026838083 1.72E-06 5.763432785 -0.127669879 VSTFSGRS(ph)PPAPPPYK ddPTM_A459_MK2206_30min_R2 2 VSTFSGRSPPAPPPYK 16 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 VS(0.001)T(0.024)FS(0.093)GRS(0.882)PPAPPPYK;VS(0.001)T(0.003)FS(0.016)GRS(0.976)PPAPPPY(0.004)K 81.643 0.011697 17470800 57867 100608 79251 102828 109840 102304 97771 80843 94250 96765 TRUE FALSE 62297.34201 95611.95302 81893.18879 94426.62347 105527.1297 106197.2504 84933.55026 91409.45768 102447.6946 93607.56597 0.665516098 1.021412661 0.874856513 1.008749907 1.127335473 1.134494304 0.907336382 0.976517835 1.094438185 1 16.51433752 -4.327264157 1.528890766 1.023196712 6.45E-31 0.603701412 0.083717013 2.890735169 2.478923416 0.024567552 6.284635144 4.71E-05 4.327264157 -1.023196712 VSTGDTS(ph)PCGTEEDSSPASPMHER ddPTM_A459_MK2206_30min_R1 1 VSTGDTSPCGTEEDSSPASPMHER 24 0 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 VS(0.162)T(0.05)GDT(0.174)S(0.579)PCGT(0.034)EEDSSPASPMHER 61.903 0.0040726 3921300 700.23 444.94 537.25 494.49 664.43 562.81 575.85 473.73 388.64 407.66 TRUE FALSE 640.6717614 415.9743251 500.7829669 532.5757055 637.9643461 594.6758158 537.4360972 469.5882286 429.0405188 458.1639985 1.398345928 0.907915782 1.093021208 1.16241282 1.392436656 1.297954047 1.17302123 1.024934805 0.936434378 1 8.839720289 -7.810190626 3.426397418 0.972128538 1.198932675 0.350612284 0.136599773 0.301174457 7.140887698 0.087503774 0.039840263 1.55E-08 7.810190626 0.226804137 VSTGDTS(ph)PCGTEEDSSPASPMHER ddPTM_A459_MK2206_30min_R2 1 VSTGDTSPCGTEEDSSPASPMHER 24 0 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 VS(0.061)T(0.061)GDT(0.174)S(0.627)PCGT(0.077)EEDS(0.001)SPASPMHER 50.783 0.024314 4491900 3354.6 5271 5336.9 6491.3 7326.9 6342.2 4782.6 4789.1 4470.8 4743.9 TRUE FALSE 3611.430755 5009.249805 5514.829582 5960.940025 7039.209091 6583.556865 4154.638875 5415.051813 4859.662103 4589.106932 0.786957203 1.091552208 1.201721743 1.298932475 1.533895199 1.434605243 0.905326229 1.179979437 1.058955953 1 12.16399771 -7.271942721 24.97454764 1.051063707 1.234958816 0.174535419 0.199052354 1515.03573 3602395.697 0.091246795 0.062248883 5.35E-08 7.271942721 0.183895109 VSTGDTSPCGTEEDSSPAS(ph)PMHER ddPTM_A459_MK2206_30min_R2 1 VSTGDTSPCGTEEDSSPASPMHER 24 0 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 VSTGDTSPCGTEEDS(0.049)S(0.242)PAS(0.709)PMHER 121.7 6.11E-06 0 10580 12262 10277 13212 10630 9915.8 11417 8590.3 8758 8616.9 TRUE FALSE 11390.01293 11653.08691 10619.63005 12132.53734 10212.61279 10293.15272 9917.934186 9713.081705 9519.755009 8335.731259 1.366408367 1.397968162 1.273989014 1.455485663 1.225160993 1.234823004 1.189809733 1.165234507 1.142041977 1 13.02509305 -7.454790744 0.34993448 0.991611533 1.424244791 0.822639695 0.05390198 0.543478586 0.181930319 0.068945159 0.082283135 3.51E-08 7.454790744 0.432633258 VSTLAGPS(ph)SDDENEEESKPEKEDEPQEDAK ddPTM_A459_MK2206_30min_R2 1 VSTLAGPSSDDENEEESKPEKEDEPQEDAK 30 2 A0A087X2H1;Q9ULT8;H0YJP0;G3V4V5 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 VS(0.001)T(0.003)LAGPS(0.398)S(0.398)DDENEEES(0.2)KPEKEDEPQEDAK 56.688 0.0017918 40201000 26232 29088 21233 18165 26570 12705 30674 22242 16575 28915 TRUE FALSE 28240.34209 27643.53222 21940.89762 16680.86139 25526.7283 13188.49768 26646.46695 25149.10577 18016.66354 27971.50592 1.009611072 0.988274721 0.78440173 0.596351925 0.912597569 0.471497592 0.952628973 0.899097311 0.644107743 1 14.77167031 -2.962077901 10.20347037 0.816125741 0.942548846 0 0.182584641 0 0 0.041384092 0 0.001091245 2.962077901 0.126423104 VSTTTDSPVS(ph)PAQAASPFIPLDELSSK ddPTM_A459_MK2206_30min_R1 1 VSTTTDSPVSPAQAASPFIPLDELSSK 27 0 Q96E09 Q96E09 FAM122A Protein FAM122A 1 VS(0.01)T(0.01)T(0.009)T(0.027)DS(0.256)PVS(0.684)PAQAAS(0.003)PFIPLDELSSK 96.699 1.50E-06 11430000 2993.8 3165 3487.9 2706.5 3402 2773.3 2951.4 2965.4 2718.3 2620.9 TRUE FALSE 2739.161589 2958.957925 3251.151066 2914.955099 3266.491136 2930.321849 2754.517491 2939.47382 3000.877013 2945.596879 0.929917331 1.004535938 1.10373252 0.989597429 1.108940317 0.994814284 0.935130503 0.997921284 1.01876704 1 11.52434429 -6.978352637 24.99547418 0.984522999 1.030589553 0.112506891 0.052928349 473.1722912 546354.1751 0.018876687 0.016646577 1.05E-07 6.978352637 0.046066554 VSTVTS(ph)PSR ddPTM_A459_MK2206_30min_R1 2 VSTVTSPSR 9 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 VS(0.001)T(0.001)VT(0.223)S(0.771)PS(0.004)R;VS(0.001)T(0.006)VT(0.224)S(0.764)PS(0.006)R 102.06 0.016467 20068900 19311.2 17981.8 15786.2 14509 17125.3 16565.8 15080.7 15155.6 12761.5 11723.8 TRUE FALSE 17668.68103 16811.18155 14714.67673 15626.48569 16443.16304 17503.74128 14074.69402 15023.09619 14088.10359 13176.23285 1.340950879 1.27587162 1.116759008 1.185960044 1.247941139 1.328432904 1.068188015 1.140166264 1.069205724 1 13.68565034 -7.839997043 1.008915817 1.018214571 1.240399576 0.56361716 0.07370081 0.444959252 0.822506422 0.070005676 0.027416339 1.45E-08 7.839997043 0.222185005 VSVGAPDLSLEASEGS(ph)IKLPK ddPTM_A459_MK2206_30min_R1 1 VSVGAPDLSLEASEGSIKLPK 21 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VSVGAPDLS(0.001)LEAS(0.061)EGS(0.938)IKLPK 54.56 0.01907 26820000 3353.6 3225.8 3370.3 3516.3 2679.5 2271.9 2292.3 3121 2258.5 2534.1 TRUE FALSE 3068.35871 3015.799834 3141.533426 3787.126035 2572.769841 2400.533015 2139.38485 3093.713426 2493.279157 2848.043439 1.07735671 1.05890233 1.103049688 1.329729028 0.903346419 0.842870927 0.751177043 1.086259213 0.87543579 1 11.47575544 -6.31002297 22.64375423 0.902878418 1.133504612 0.521120606 0.108893644 111.7074827 52063.89102 0.034606884 0.039240733 4.90E-07 6.31002297 0.230626194 VSVGAPDLSLEASEGS(ph)IKLPK ddPTM_A459_MK2206_30min_R2 2 VSVGAPDLSLEASEGSIKLPK 21 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VSVGAPDLSLEAS(0.002)EGS(0.998)IKLPK;VSVGAPDLSLEAS(0.119)EGS(0.881)IKLPK 130.98 2.81E-05 17358500 52474 40746 40874 30551 36241 28037 56109 28173 36560 36639 TRUE FALSE 56491.44979 38722.61289 42236.71876 28054.88557 34817.99624 29103.96768 48741.8209 31855.30783 39739.92271 35443.47243 1.593846368 1.092517472 1.191664243 0.791538855 0.982352852 0.821137594 1.375198804 0.89876374 1.12121979 1 15.11323233 -4.183703007 1.402254985 1.011125918 3.341999522 0.51473296 0.165441919 4.582257855 2.492330913 0.046093261 22.78414645 6.55E-05 4.183703007 2.330873604 VSVGDSSQEFS(ph)PIQEAQQDR ddPTM_A459_MK2206_30min_R1 1 VSVGDSSQEFSPIQEAQQDR 20 0 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 VSVGDS(0.013)S(0.049)QEFS(0.939)PIQEAQQDR 103.73 0.0015351 0 393.62 297.32 305.54 242.21 468.62 453.05 350.17 438 369.58 326.66 TRUE FALSE 360.140552 277.964414 284.8007961 260.8650562 449.9538731 478.7012995 326.8107982 434.1706122 407.9991636 367.129107 0.980964313 0.757129873 0.775751066 0.710554002 1.225601197 1.303904513 0.890179482 1.182610161 1.11132339 1 8.520143689 -6.260388184 24.99997545 1.125877523 0.800434186 0.594955609 0.126341475 66.11793836 1572441.277 0.038472384 0.046882736 5.49E-07 6.260388184 -0.325443336 VSVGDSSQEFS(ph)PIQEAQQDR ddPTM_A459_MK2206_30min_R2 1 VSVGDSSQEFSPIQEAQQDR 20 0 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 VSVGDSSQEFS(1)PIQEAQQDR 120.74 0.00024922 3194800 6485.1 7425 5028.3 8316 8141.8 6453.7 8396.7 5435.1 6634 7447 TRUE FALSE 6981.604242 7056.285297 5195.941012 7636.556198 7822.112023 6699.300076 7294.203204 6145.486231 7211.013328 7204.005 0.969128178 0.979494781 0.721257275 1.060043156 1.085800471 0.929941064 1.012520564 0.853065237 1.000972838 1 12.81458347 VSVHVIEGDHR ddPTM_A459_MK2206_30min_R1 3 VSVHVIEGDHR 11 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 0 ;; 135.8 0.00082817 17898000 17433.3 10558.1 13034 9111 25533 24308.5 23099 15602.8 10298.6 9114.4 FALSE TRUE 15950.50629 9870.765771 12149.28839 9812.730799 24515.96654 25684.82626 21558.10786 15466.38636 11369.17632 10243.56068 1.557125182 0.963606902 1.186041531 0.957941394 2.393305151 2.50741193 2.104552169 1.509864279 1.109885193 1 13.32242967 -6.242353389 24.9911 1.84984426 1.153128072 0.257809418 0.491558294 1080.114123 1414295.838 0.153699929 0.198100545 5.72E-07 6.242353389 -0.696716188 VSVHVIEGDHR ddPTM_A459_MK2206_30min_R2 2 VSVHVIEGDHR 11 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 0 ; 112.83 0.0041991 19029500 18624.1 61533 36999 80521 84851 121866 86659 49390 90244 43774 FALSE TRUE 20049.97542 58477.3607 38232.52819 73942.17673 81519.3234 126503.696 75280.5692 55845.44258 98093.26 42345.65796 0.47348362 1.380952936 0.902867733 1.746157228 1.92509285 2.987406551 1.777763597 1.318799737 2.316489215 1 15.36992643 -5.839287854 3.669251808 1.945966254 0.955754876 0.38686788 0.544531617 0.237114449 6.259124663 0.157795274 0.251939292 1.45E-06 5.839287854 -0.990211378 VSVT(ph)PPEESQNSDTPPRPDR ddPTM_A459_MK2206_30min_R2 1 VSVTPPEESQNSDTPPRPDR 20 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 VS(0.051)VT(0.895)PPEES(0.039)QNS(0.013)DT(0.002)PPRPDR 69.704 0.016362 20512000 41313 36768 38326 46997 41844 53094 56181 41302 33343 47551 TRUE FALSE 44475.95504 34942.15459 39603.76971 43157.19476 40200.99431 55114.52937 48804.36721 46700.31321 36243.11387 45999.41476 0.966880889 0.759621721 0.860962469 0.938211823 0.873945778 1.198157187 1.060978003 1.015237117 0.787903804 1 15.48932789 -6.622143632 23.12120152 1.018626456 0.875347852 0.277502043 0.106560067 9.97643561 2307.594468 0.036124442 0.036124446 2.39E-07 6.622143632 -0.143278604 VSVTPPEES(ph)QNSDTPPRPDR ddPTM_A459_MK2206_30min_R2 1 VSVTPPEESQNSDTPPRPDR 20 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 VS(0.004)VT(0.012)PPEES(0.415)QNS(0.389)DT(0.18)PPRPDR 78.354 0.0027077 6223400 10423 11719 9845.6 11267 11147 10758 12329 8730.3 10793 11508 TRUE FALSE 11220.99289 11137.0515 10173.84739 10346.45006 10709.31277 11167.40323 10710.18749 9871.380186 11731.75563 11132.4949 1.00794952 1.000409306 0.913887451 0.929391852 0.961986766 1.003135715 0.96206534 0.886717692 1.053829868 1 13.44248933 -6.554410616 24.98437387 0.973952849 0.960036816 0.024010743 0.047598488 1187.493077 940906.5342 0.016066729 0.01606696 2.79E-07 6.554410616 -0.013916033 VSVTPPEESQNS(ph)DTPPRPDR ddPTM_A459_MK2206_30min_R2 1 VSVTPPEESQNSDTPPRPDR 20 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 VS(0.001)VT(0.002)PPEES(0.05)QNS(0.701)DT(0.246)PPRPDR 52.91 0.030731 7378300 12003 15755 12743 13496 13653 16275 16680 13381 15927 13571 TRUE FALSE 12921.95891 14972.62961 13167.84526 12393.33363 13116.91462 16894.35653 14489.89596 15129.94264 17312.30167 13128.17938 0.984291769 1.140495508 1.00302143 0.944025311 0.99914194 1.286877338 1.103724709 1.15247836 1.318713065 1 13.68037924 -6.738934599 24.99538993 1.177598983 1.01669273 0.404983629 0.095727356 236.5963872 262780.05 0.030890051 0.030867857 1.82E-07 6.738934599 -0.160906252 VSVTTNTTDSVS(ph)DEEK ddPTM_A459_MK2206_30min_R2 1 VSVTTNTTDSVSDEEK 16 0 Q9NR09;A0A3B3IUB9 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 1 VSVT(0.004)T(0.003)NT(0.002)T(0.005)DS(0.059)VS(0.927)DEEK 79.347 0.024818 2558500 11025 9356.5 9702.3 8211.1 10229 7917.2 11805 9311.1 9495.6 13821 TRUE FALSE 11869.08248 8891.869816 10025.76984 7540.226864 9827.358063 8218.494594 10254.98932 10528.09274 10321.51012 13370.0219 0.887738447 0.665060228 0.749869365 0.563965184 0.735029317 0.614695672 0.767013652 0.787440201 0.771989021 1 13.70671421 -8.871024644 0.799162084 1.000180918 0.70200858 0.500594657 0.084748896 0.964962539 1.136077728 0.08297238 0.028591637 1.35E-09 8.871024644 -0.298172338 VT(ph)GSMMEDAIVSTST(ph)PGSPET(ph)K ddPTM_A459_MK2206_30min_R1 1 VTGSMMEDAIVSTSTPGSPETK 22 0 Q8WXI7 Q8WXI7 MUC16 Mucin-16 3 VT(0.782)GS(0.218)MMEDAIVS(0.027)T(0.064)S(0.184)T(0.508)PGS(0.463)PET(0.755)K 51.524 0.034877 0 848.86 467.4 372.3 294.89 1413.3 1263.2 1568.6 1189.3 287.87 316.26 TRUE FALSE 776.6599995 436.972175 347.0293133 317.6024789 1357.005268 1334.721292 1463.961556 1178.902075 317.7951167 355.4406764 2.185062237 1.229381452 0.976335395 0.893545674 3.817810842 3.755116904 4.118722625 3.316733716 0.894087643 1 8.473464982 -6.253823475 24.85655921 3.044899431 1.289906446 0.29305061 1.104390924 612.0493178 1997586.892 0.332471397 0.420821476 5.57E-07 6.253823475 -1.754992984 VT(ph)LELGGK ddPTM_A459_MK2206_30min_R1 1 VTLELGGK 8 0 P00352;H0Y2X5;H0YMG7;O94788-4;P05091-2;O94788-2;O94788-3;P47895;P30837;P05091;O94788 P00352 ALDH1A1;ALDH1A3;ALDH1A2;ALDH2;ALDH1B1 "Retinal dehydrogenase 1;Retinal dehydrogenase 2;Aldehyde dehydrogenase, mitochondrial;Aldehyde dehydrogenase family 1 member A3;Aldehyde dehydrogenase X, mitochondrial" 1 VT(1)LELGGK 109.66 0.028891 3150400 3666.2 3823.2 3679.2 2965.6 4158.6 3330.7 4283.1 3731.8 3058.8 2976.1 TRUE FALSE 3354.370438 3574.308985 3429.466155 3194.011026 3992.954156 3519.281356 3997.382214 3699.173266 3376.773206 3344.801736 1.002860768 1.068616099 1.025312238 0.954917893 1.193779025 1.052164413 1.195102888 1.105946946 1.009558554 1 11.70770498 -6.248455206 24.98773299 1.101143491 1.017789244 0.246136614 0.067279402 1069.905924 2059006.986 0.019417066 0.024917517 5.64E-07 6.248455206 -0.083354247 VT(ph)NDISPESSPGVGR ddPTM_A459_MK2206_30min_R1 3 VTNDISPESSPGVGR 15 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 VT(0.874)NDIS(0.053)PES(0.066)S(0.007)PGVGR;VT(0.482)NDIS(0.166)PES(0.348)S(0.003)PGVGR;VT(0.715)NDIS(0.035)PES(0.247)S(0.003)PGVGR 205.33 8.42E-06 263736500 8560.6 9004 7474.6 6274.6 8970.2 8349.5 8109.2 7431.2 7200 6752 TRUE FALSE 7832.476016 8417.837963 6967.244977 6757.870779 8612.897939 8822.241475 7568.250064 7366.229802 7948.465765 7588.488735 1.032152289 1.109290434 0.918133402 0.890542375 1.134995154 1.16258214 0.997332977 0.970711041 1.047437249 1 12.88959688 VT(ph)NDISPESSPGVGR ddPTM_A459_MK2206_30min_R2 3 VTNDISPESSPGVGR 15 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 VT(0.98)NDIS(0.003)PES(0.017)SPGVGR;VT(0.932)NDISPES(0.067)S(0.001)PGVGR;VT(0.996)NDIS(0.001)PES(0.003)SPGVGR 244 3.75E-20 840150000 281067 361869 325207 345740 328462 313844 379242 276492 279327 311140 TRUE FALSE 302585.7056 343899.1117 336049.2391 317491.936 315564.9315 325787.5533 329447.0698 312630.4537 303622.3576 300987.5273 1.005309783 1.142569311 1.116488919 1.054834195 1.048431921 1.082395527 1.094553893 1.038682422 1.008753952 1 18.19934418 -8.013986697 2.932205702 1.00496744 1.079887232 0.405003477 0.035791424 0.272758589 4.548966161 0.027462234 0.009805348 9.68E-09 8.013986697 0.074919791 VT(ph)PTKESYTEEIVSEAESHVSGISR ddPTM_A459_MK2206_30min_R2 1 VTPTKESYTEEIVSEAESHVSGISR 25 1 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 VT(0.607)PT(0.189)KES(0.189)Y(0.011)T(0.004)EEIVSEAESHVSGISR 75.225 0.00017628 2089900 2797.1 8034.3 4342.7 7589.8 10943 9758.3 7676.7 5207 6971.1 4947.9 TRUE FALSE 3011.248127 7635.328345 4487.483451 6969.689061 10513.32284 10129.65894 6668.740069 5887.572778 7577.433677 4786.450428 0.629119255 1.595196369 0.937538896 1.456128955 2.196475863 2.116319619 1.393253763 1.230049881 1.583100837 1 12.22474045 -5.943601732 6.432182325 1.633275491 1.116079156 0.245191053 0.409114075 0.302917889 25.87852622 0.119860534 0.178446711 1.14E-06 5.943601732 -0.517196335 VT(ph)RSPPTQVAISSDSAR ddPTM_A459_MK2206_30min_R2 1 VTRSPPTQVAISSDSAR 17 1 Q6ZUT6;H0YM82;Q6ZUT6-3;Q6ZUT6-4 Q6ZUT6 C15orf52 Uncharacterized protein C15orf52 1 VT(0.665)RS(0.313)PPT(0.022)QVAISSDSAR 149.42 0.003327 0 5785.6 10381 7415 9533.3 11039 12459 11466 7115.8 10809 8082.7 TRUE FALSE 6228.549984 9865.494635 7662.212399 8754.398894 10605.55339 12933.13598 9960.500427 8045.859492 11749.14728 7818.962161 0.796595489 1.261739657 0.979952613 1.119636943 1.356388888 1.654073227 1.273890348 1.029018855 1.502647927 1 12.93276141 -6.121563361 4.105787145 1.319331072 1.03914181 0.275327806 0.211673405 0.324088906 9.242290375 0.063770408 0.084704782 7.56E-07 6.121563361 -0.280189261 VT(ph)SGGVSESPSGFSK ddPTM_A459_MK2206_30min_R1 1 VTSGGVSESPSGFSK 15 0 E7EPP6;O14757-2;O14757-3;O14757 E7EPP6 CHEK1 Serine/threonine-protein kinase Chk1 1 VT(0.5)S(0.5)GGVSESPSGFSK 199.33 5.24E-05 11035000 3096 3395.7 3937.1 3958.8 3379 3095.1 3102.6 2859.6 2760.4 2215.4 TRUE FALSE 2832.668942 3174.639313 3669.860621 4263.707462 3244.407275 3270.341887 2895.631215 2834.598819 3047.353458 2489.860477 1.137681797 1.275026991 1.473922196 1.712428267 1.303047823 1.313463914 1.162969267 1.138456891 1.223905309 1 11.28184919 -7.113633246 1.918533861 1.134293355 1.398577385 0.388597593 0.148659495 0.406269026 2.95200457 0.077227549 0.054685693 7.70E-08 7.113633246 0.26428403 VT(ph)SPEKAEEAK ddPTM_A459_MK2206_30min_R1 2 VTSPEKAEEAK 11 1 H3BTD3;P56211-2;H3BMD8;P56211 H3BTD3;P56211 ARPP19 cAMP-regulated phosphoprotein 19 1 VT(0.987)S(0.013)PEKAEEAK;VT(0.986)S(0.014)PEKAEEAK 133.88 0.017996 29715200 6698.9 9238.4 8176.7 6085 3584.9 3843.1 6448.1 5559.6 8853.9 10059.8 TRUE FALSE 6129.123378 8636.978481 7621.688386 6553.667754 3442.105842 4060.693001 6017.959014 5510.993003 9774.294589 11306.08397 0.542108425 0.763923079 0.674122747 0.579658507 0.304447221 0.35915999 0.532276165 0.487436058 0.864516362 1 13.4648117 -8.390191866 3.588530598 0.993978611 0.531282539 0.620924604 0.127308576 0.170639553 3.759856428 0.140371568 0.037320487 4.07E-09 8.390191866 -0.462696073 VTAEADSS(ph)SPTGILATSESK ddPTM_A459_MK2206_30min_R1 1 VTAEADSSSPTGILATSESK 20 0 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 VTAEADS(0.002)S(0.497)S(0.497)PT(0.004)GILATSESK 252.51 3.56E-38 9619700 1668.8 1890.6 1808.9 1444.9 1496.8 1380.1 1547.7 1350.1 1606.1 1247.9 TRUE FALSE 1526.859797 1767.521596 1686.116908 1556.186448 1437.179286 1458.240069 1444.455757 1338.296218 1773.059842 1402.499273 1.088670651 1.260265606 1.202223017 1.10958093 1.024727295 1.039743904 1.029915512 0.954222397 1.264214447 1 10.45378431 -5.955530306 3.525317191 1.048706835 1.19072099 0.316252231 0.086215363 0.255950633 6.632901632 0.024529739 0.036941572 1.11E-06 5.955530306 0.142014155 VTAEADSS(ph)SPTGILATSESK ddPTM_A459_MK2206_30min_R2 1 VTAEADSSSPTGILATSESK 20 0 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 VTAEADSS(0.919)S(0.081)PTGILATSESK 302.9 9.72E-101 18458000 40521 43023 48576 51397 40884 38933 48939 47365 38392 46194 TRUE FALSE 43623.31892 40886.54038 50195.4996 47197.70069 39278.68873 40414.6226 42513.25051 53555.76813 41731.26676 44686.69356 0.976203774 0.914960072 1.123276206 1.056191383 0.878979526 0.904399484 0.951362634 1.198472383 0.933863382 1 15.44755768 VTAEADSSS(ph)PTGILATSESK ddPTM_A459_MK2206_30min_R1 3 VTAEADSSSPTGILATSESK 20 0 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 VTAEADS(0.014)S(0.084)S(0.809)PT(0.092)GILAT(0.001)SESK;VTAEADSS(0.027)S(0.969)PT(0.005)GILATSESK;VTAEADS(0.014)S(0.21)S(0.771)PT(0.006)GILATSESK 310.98 4.19E-117 59287000 11677.3 11661.9 12170.8 10194.6 10842.7 9632.3 11190.6 11063 10155.2 10296.9 TRUE FALSE 10684.08432 10902.70819 11344.68001 10979.78986 10410.8123 10177.6725 10444.09549 10966.27736 11210.86938 11572.55771 0.92322584 0.942117418 0.980308787 0.948778147 0.899612044 0.879466126 0.902488089 0.947610514 0.968746034 1 13.49842014 -8.358610159 2.101461186 0.997665315 0.926374186 0.438984944 0.027180679 0.333321671 2.895394219 0.030025957 0.008517182 4.38E-09 8.358610159 -0.071291129 VTAEADSSS(ph)PTGILATSESK ddPTM_A459_MK2206_30min_R2 3 VTAEADSSSPTGILATSESK 20 0 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 VTAEADS(0.005)S(0.045)S(0.948)PT(0.002)GILATSESK;VTAEADSS(0.038)S(0.952)PT(0.01)GILATSESK;VTAEADS(0.01)S(0.045)S(0.933)PT(0.012)GILATSESK 216.16 2.62E-19 41093000 107510 109121 107875 124365 112330 94552 118391 91852 91349 114972 TRUE FALSE 115741.0483 103702.2098 111471.4987 114203.9817 107919.3598 98150.24262 102846.1195 103857.3718 99294.3709 111220.4731 1.040645172 0.932402165 1.002257009 1.026825175 0.970319194 0.882483592 0.924704928 0.933797249 0.892770622 1 16.76306285 -6.557417572 7.83266066 0.922707246 0.996167162 0.435015747 0.03954594 0.198934088 37.82723685 0.012482891 0.012551432 2.77E-07 6.557417572 0.073459916 VTAGWPSEPGQGDLNPES(ph)PAALGQDLLEPR ddPTM_A459_MK2206_30min_R2 1 VTAGWPSEPGQGDLNPESPAALGQDLLEPR 30 0 Q92766;Q92766-2;A0A087X055;Q92766-5;Q92766-3;Q92766-4 Q92766 RREB1 Ras-responsive element-binding protein 1 1 VTAGWPSEPGQGDLNPES(1)PAALGQDLLEPR 80.067 1.51E-05 1711200 8509.7 12664 11910 11849 8154.2 13067 13693 9952.4 7872.4 11374 TRUE FALSE 9161.209175 12035.12418 12307.07346 10880.8988 7834.025136 13564.27384 11895.09265 11253.21285 8557.127122 11002.86731 0.832620163 1.093817078 1.118533297 0.988914843 0.71199851 1.232794458 1.081090257 1.022752755 0.777717924 1 13.42559191 -8.220117113 24.36551953 0.888858821 1.015823783 0.096258405 0.148093997 752.3790787 443638.5465 0.100383048 0.03794022 6.02E-09 8.220117113 0.126964961 VTAVLKSQGYDWS(ph)EPFSPGEGEQSLT(ph)NAVDS(ph)SR ddPTM_A459_MK2206_30min_R2 1 VTAVLKSQGYDWSEPFSPGEGEQSLTNAVDSSR 33 1 M0R2A8 M0R2A8 DPP9 3 VT(0.013)AVLKS(0.013)QGY(0.038)DWS(0.424)EPFS(0.426)PGEGEQS(0.166)LT(0.92)NAVDS(0.5)S(0.5)R 43.622 0.01029 8075100 14833 6509.1 8813.3 11654 7313.2 9855.7 22143 10301 9722.3 11048 TRUE FALSE 15968.62588 6185.867559 9107.131023 10701.83092 7026.047022 10230.76557 19235.5975 11647.37607 10567.92808 10687.50466 1.494139782 0.578794373 0.852128847 1.001340468 0.657407622 0.957264197 1.799821203 1.08981249 0.988811553 1 13.38363743 -7.025485195 24.96601465 1.248730984 0.889918368 0.171666606 0.314351168 1116.974715 1094216.633 0.116785412 0.090840841 9.43E-08 7.025485195 -0.358812616 VTDALPEPEPPGAMAAS(ph)EDEEEEEEALEAMQSR ddPTM_A459_MK2206_30min_R1 6 VTDALPEPEPPGAMAASEDEEEEEEALEAMQSR 33 0 Q9Y3E7-2;Q9Y3E7-4;Q9Y3E7;Q9Y3E7-3 Q9Y3E7-2 CHMP3 Charged multivesicular body protein 3 1 VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR 151.19 1.96E-27 22480300 27761 27703.26 27403.56 23888.22 31282.7 27790.87 29438.1 26459.91 23130.77 22253.5 TRUE FALSE 25399.78117 25899.77274 25543.4827 25728.09484 30036.64382 29364.36504 27474.33806 26228.5738 25535.29632 25010.43159 1.015567488 1.035558809 1.021313151 1.028694557 1.200964634 1.174084699 1.098515152 1.048705365 1.020985833 1 14.61024233 -3.084766031 16.62250711 1.070583484 0.581129429 0 0.066968849 0 0 0.016899209 0 0.000822686 3.084766031 -0.489454056 VTDALPEPEPPGAMAAS(ph)EDEEEEEEALEAMQSR ddPTM_A459_MK2206_30min_R2 5 VTDALPEPEPPGAMAASEDEEEEEEALEAMQSR 33 0 Q9Y3E7-2;Q9Y3E7-4;Q9Y3E7;Q9Y3E7-3 Q9Y3E7-2 CHMP3 Charged multivesicular body protein 3 1 VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(0.982)EDEEEEEEALEAMQS(0.018)R;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR 100.1 2.98E-11 11242900 153699 192358 164109.6 210874 189573.9 204159.9 197795.1 166386.6 181523.4 178706.4 TRUE FALSE 165466.3136 182805.7814 169580.9322 193644.9196 182130.2762 211929.3481 171824.3658 188133.8999 197311.9772 172875.2248 0.957143013 1.057443492 0.980944102 1.120142692 1.053536019 1.225909313 0.993921286 1.088264094 1.141354855 1 17.3993716 -5.759977304 24.99944049 1.092958982 1.004403522 0.268104115 0.068102939 51.2259811 875855.3385 0.018003112 0.029131872 1.74E-06 5.759977304 -0.08855546 VTDAPNKS(ph)EISK ddPTM_A459_MK2206_30min_R2 2 VTDAPNKSEISK 12 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 VTDAPNKS(0.989)EIS(0.011)K;VT(0.004)DAPNKS(0.994)EIS(0.001)K 121.99 0.017339 3031000 21459.4 31519 23954 24243 24670 19815.7 25322 21960 19176.6 24090 TRUE FALSE 23102.34816 29953.81229 24752.6144 22262.26935 23701.33184 20569.80035 21997.19098 24830.2474 20844.546 23303.94527 0.991349228 1.285353701 1.062164115 0.955300448 1.01705233 0.88267459 0.94392562 1.065495439 0.894464253 1 14.5082866 -5.563973098 4.713904725 0.967283949 1.146892232 0.41134953 0.083708086 0.161269811 8.162621222 0.021642488 0.039875359 2.73E-06 5.563973098 0.179608282 VTEGLTDVILYHQPDDK ddPTM_A459_MK2206_30min_R1 1 VTEGLTDVILYHQPDDK 17 0 O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 142.74 0.00069983 9764000 2922.1 3060.8 3106.6 2713.1 2621.2 2693.3 2840.4 2635.6 2208 2212.4 FALSE TRUE 2673.56005 2861.541364 2895.732647 2922.063432 2516.792054 2845.792318 2650.922099 2612.557227 2437.529501 2486.488815 1.0752351 1.15083621 1.164587039 1.175176584 1.012187161 1.144502361 1.066130715 1.050701379 0.98030986 1 11.27989423 -7.648755413 0.79382948 0.985874019 1.132514869 0.546007566 0.046370909 0.492463285 0.579575515 0.041893643 0.020040102 2.25E-08 7.648755413 0.14664085 VTEGLTDVILYHQPDDK ddPTM_A459_MK2206_30min_R2 1 VTEGLTDVILYHQPDDK 17 0 O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 75.445 0.031036 3557800 28867 43829 39738 34129 42045 24934 40408 31498 29650 34176 FALSE TRUE 31077.07971 41652.51559 41062.84509 31340.55153 40394.10204 25882.88084 35102.38106 35614.89675 32228.90341 33060.83992 0.939996679 1.259874695 1.242038774 0.94796598 1.221811126 0.782886367 1.061751037 1.077253235 0.974836195 1 15.01283576 -6.722228439 24.99995085 0.9893229 1.126941106 0.236782575 0.127599848 249.5551959 159109.6582 0.041617401 0.041616789 1.90E-07 6.722228439 0.137618206 VTEGLVDVILYHQPDDK ddPTM_A459_MK2206_30min_R1 1 VTEGLVDVILYHQPDDK 17 0 O43390;B4DT28;O43390-3 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R 0 143.14 0.0006984 6389300 3740.3 4281.6 4142.1 3989.2 3635.1 3212.9 3754.8 3591.1 2834.7 2832 FALSE TRUE 3422.167844 4002.867062 3860.945793 4296.448875 3490.30627 3394.811621 3504.324143 3559.703391 3129.377209 3182.849541 1.075189952 1.257636282 1.213046908 1.349874953 1.096597946 1.066595068 1.101002136 1.118401403 0.983199856 1 11.63610324 -6.454923184 9.149768891 1.066071426 1.22560474 0.542279176 0.073787656 0.354742339 45.7443865 0.022561177 0.025543848 3.51E-07 6.454923184 0.159533313 VTENLASLT(ph)PK ddPTM_A459_MK2206_30min_R1 1 VTENLASLTPK 11 0 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 VTENLAS(0.001)LT(0.999)PK 113.54 0.016462 5308900 5161.1 6618.4 6100.1 5413.7 4661.6 3768.9 4427.4 4673.3 4915.3 4880.8 TRUE FALSE 4722.121343 6187.540957 5686.042208 5830.664112 4475.918601 3982.291861 4132.056224 4632.441831 5426.263025 5485.470352 0.860841649 1.127987312 1.036564204 1.062928744 0.815958945 0.725970902 0.753272912 0.844493094 0.989206518 1 12.42139961 -6.263707681 24.92283314 0.835522196 1.030679807 0.371555145 0.104541773 184.8167595 2030661.511 0.032129233 0.038211429 5.45E-07 6.263707681 0.195157611 VTENLASLT(ph)PK ddPTM_A459_MK2206_30min_R2 2 VTENLASLTPK 11 0 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 VTENLASLT(1)PK;VTENLAS(0.009)LT(0.991)PK 125.84 0.0076543 14334300 121656 117343 114737 106582 103489 89384 120327 97177 82925 107319 TRUE FALSE 130970.0769 111515.9173 118562.2743 97873.90966 99425.50187 92785.57075 104527.9204 109878.3676 90137.66661 103817.1898 1.261545194 1.074156577 1.142029316 0.942752446 0.957697873 0.893739957 1.006845981 1.058383181 0.868234507 1 16.66368582 -4.909657048 0.907348721 0.961703047 1.353895217 0.65254587 0.066436978 1.172281131 0.866228754 0.023674601 0.438521187 1.23E-05 4.909657048 0.392192169 VTFFEPGS(ph)GDENGTSNKEDEFR ddPTM_A459_MK2206_30min_R1 2 VTFFEPGSGDENGTSNKEDEFR 22 1 O95793-2;O95793-3;O95793;Q5JW30 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 VT(0.001)FFEPGS(0.909)GDENGT(0.068)S(0.022)NKEDEFR;VT(0.005)FFEPGS(0.995)GDENGTSNKEDEFR 87.228 0.00030115 27455400 4231.84 3377.21 4390.5 3824.94 3727.7 3225.39 3771 3862.19 3639.17 3136.94 TRUE FALSE 3871.899786 3157.353015 4092.485093 4119.537542 3579.217815 3408.008794 3519.443471 3828.42328 4017.474744 3525.56781 1.098234382 0.895558726 1.160801696 1.168474913 1.015217409 0.966655296 0.998262879 1.085902608 1.139525592 1 11.78363991 -7.877263845 15.89412663 1.084641751 1.042834898 0.024699352 0.085552976 3.52267611 471.7915695 0.048769342 0.023427466 1.33E-08 7.877263845 -0.041806853 VTFFEPGS(ph)GDENGTSNKEDEFR ddPTM_A459_MK2206_30min_R2 2 VTFFEPGSGDENGTSNKEDEFR 22 1 O95793-2;O95793-3;O95793;Q5JW30 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 VT(0.003)FFEPGS(0.672)GDENGT(0.162)S(0.162)NKEDEFR;VT(0.001)FFEPGS(0.463)GDENGT(0.268)S(0.268)NKEDEFR 51.566 0.024403 10899700 15358.3 18147.4 16023.8 17342 18053.1 15276.6 22287 13978.5 14535.2 16787.3 TRUE FALSE 16534.14326 17246.2265 16558.02549 15925.10313 17344.24458 15857.96172 19360.69013 15805.53795 15799.44542 16239.53178 1.018141624 1.061990379 1.019612248 0.980638072 1.068026149 0.976503629 1.192195095 0.973275471 0.972900305 1 13.98722242 VTFFEPGSGDENGTS(ph)NK ddPTM_A459_MK2206_30min_R1 1 VTFFEPGSGDENGTSNK 17 0 O95793-2;O95793-3;O95793;Q5JW30 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 VT(0.012)FFEPGS(0.076)GDENGT(0.329)S(0.582)NK 84.195 0.03258 0 319.73 319.75 229.75 253.19 334.91 299.27 453.79 252.94 368.37 334.11 TRUE FALSE 292.5352845 298.9342169 214.1552101 272.6907377 321.5698255 316.2144088 423.5184971 250.7285722 406.6633797 375.5020692 0.779051059 0.796092063 0.570316991 0.726203023 0.856372979 0.842110962 1.127872605 0.667715554 1.082985723 1 8.552677047 -6.539517145 1.953403661 0.939752956 0.713304382 0.400247364 0.131552008 0.358545066 2.764143769 0.047864878 0.051284108 2.89E-07 6.539517145 -0.226448574 VTFS(ph)VSPIEATEK ddPTM_A459_MK2206_30min_R2 1 VTFSVSPIEATEK 13 0 Q9ULD2;Q9ULD2-5;H0YC63;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 VTFS(0.798)VS(0.201)PIEATEK 242.4 5.46E-18 38996000 197590 198750 186510 195240 187900 158600 217310 176060 138890 195120 TRUE FALSE 212717.6423 188880.364 192728.1503 179288.2675 180522.1019 164635.6341 188776.936 199071.6465 150970.4011 188753.2504 1.12696148 1.000673438 1.02105871 0.949855259 0.956392017 0.87222675 1.000125484 1.054666058 0.799829411 1 17.52614196 -1.52288075 0.717669929 0.948845815 25.79038396 0.374618934 0.068759738 340.3297256 1.681282962 0.02587947 13605.19011 0.029999862 1.52288075 24.84153815 VTFSVS(ph)PIEATEK ddPTM_A459_MK2206_30min_R1 4 VTFSVSPIEATEK 13 0 Q9ULD2;Q9ULD2-5;H0YC63;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 VT(0.095)FS(0.422)VS(0.473)PIEAT(0.01)EK;VTFS(0.011)VS(0.963)PIEAT(0.025)EK;VTFS(0.069)VS(0.924)PIEAT(0.006)EK;VTFS(0.028)VS(0.972)PIEATEK 246.86 1.03E-22 173741000 19579 18971.2 17304.7 13595.9 16439.4 14802.2 16708.5 14444.2 17069.9 15080.5 TRUE FALSE 17913.70324 17736.17143 16130.10518 14643.05857 15784.58389 15640.28777 15593.90645 14317.91588 18844.37719 16948.78619 1.056931336 1.046456733 0.951696776 0.86395913 0.931310579 0.922796925 0.920060367 0.844775297 1.111842286 1 14.04889434 -5.286161778 4.134225304 0.931927522 1.054426457 0.267783363 0.070380762 0.230001361 9.282584219 0.017772809 0.043700164 5.17E-06 5.286161778 0.122498935 VTFSVS(ph)PIEATEK ddPTM_A459_MK2206_30min_R2 4 VTFSVSPIEATEK 13 0 Q9ULD2;Q9ULD2-5;H0YC63;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 VTFS(0.001)VS(0.999)PIEATEK;VTFS(0.383)VS(0.617)PIEATEK;VTFS(0.207)VS(0.793)PIEATEK;VTFSVS(1)PIEATEK 218.6 1.59E-08 53480100 252734 278240 252736 312059 238510 226023 293603 244176 198580 276814 TRUE FALSE 272083.5094 264423.0062 261162.0921 286562.7815 229144.899 234624.4636 255052.5734 276090.6416 215852.1294 267781.5818 1.016065061 0.987457779 0.975280265 1.070136264 0.855715682 0.876178496 0.952464959 1.031029243 0.806075339 1 18.03069721 -6.260164574 24.99815333 0.921203194 1.007825437 0.313736003 0.066515279 156.0116449 3059297.116 0.019989478 0.024365829 5.49E-07 6.260164574 0.086622243 VTGPPPGT(ph)PQPR ddPTM_A459_MK2206_30min_R1 2 VTGPPPGTPQPR 12 0 F5GYK2;Q9NRL3;Q9NRL3-3;R4GN16;M0QZM0 F5GYK2 STRN4 Striatin-4 1 VTGPPPGT(1)PQPR;VTGPPPGT(1)PQPR 143.76 0.0018691 25100100 4784.4 5518.1 4554.3 3456 4285.8 4211 3966.7 2788.9 2541.1 2570.5 TRUE FALSE 4377.461656 5158.870687 4245.166805 3722.181719 4115.087511 4449.423181 3702.088681 2764.516941 2805.256438 2888.952946 1.51524159 1.785723334 1.469448234 1.288418949 1.424421784 1.540150796 1.281463821 0.956926953 0.971028774 1 11.49633099 -7.578297918 2.756851193 0.967317374 1.501285116 0.800005698 0.117905078 0.131474549 2.018802178 0.072543198 0.038360451 2.64E-08 7.578297918 0.533967742 VTGPPPGT(ph)PQPR ddPTM_A459_MK2206_30min_R2 2 VTGPPPGTPQPR 12 0 F5GYK2;Q9NRL3;Q9NRL3-3;R4GN16;M0QZM0 F5GYK2 STRN4 Striatin-4 1 VTGPPPGT(1)PQPR;VT(0.026)GPPPGT(0.974)PQPR 143.58 0.0019038 31334000 59749 73362 67570 72452 60639 56806 39718 41418 41147 37980 TRUE FALSE 64323.42938 69718.94976 69822.75008 66532.43984 58258.00817 58967.79214 34502.97889 46831.47481 44725.89168 36740.71571 1.750739694 1.897593675 1.900418887 1.810864012 1.585652512 1.604971242 0.939093815 1.274647864 1.217338607 1 15.16509211 -6.911014987 1.53137806 1.124724785 1.841098468 0.858370563 0.129906562 0.137099257 0.660627314 0.061090924 0.048968627 1.23E-07 6.911014987 0.716373683 VTGS(ph)LSSAK ddPTM_A459_MK2206_30min_R2 1 VTGSLSSAK 9 0 P39748;P39748-2 P39748 FEN1 Flap endonuclease 1 1 VT(0.082)GS(0.915)LS(0.002)SAK 84.31 0.036665 7594600 22793 25592 20425 26290 22905 18655 32553 19834 17326 20994 TRUE FALSE 24538.0496 24321.13849 21105.95931 24142.0229 22005.63461 19364.9291 28278.752 22426.3719 18832.98416 20308.9675 1.208237179 1.197556621 1.039243344 1.188737089 1.083542756 0.953516179 1.392426867 1.104259579 0.927323566 1 14.30982927 -14.52285913 0.042001558 0.348177477 1.48382661 0.150470571 0.12330662 1714.273329 5.34844131 134.1491105 37.86963858 3.00E-15 14.52285913 1.135649133 VTGTEGSSSTLVDYTS(ph)TSSTGGSPVRK ddPTM_A459_MK2206_30min_R2 1 VTGTEGSSSTLVDYTSTSSTGGSPVRK 27 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 VTGTEGSSSTLVDY(0.003)T(0.023)S(0.324)T(0.074)S(0.165)S(0.165)T(0.123)GGS(0.123)PVRK 61.526 0.0019379 15324000 11615 10392 11562 11746 11881 10425 11210 11507 12916 13689 TRUE FALSE 12504.25333 9875.948391 11947.47131 10786.31423 11414.49224 10821.73068 9738.113534 13011.00441 14039.41033 13242.32905 0.944263904 0.745786361 0.902218278 0.814533016 0.861970141 0.817207505 0.735377704 0.982531423 1.060191925 1 13.69286926 -7.91205198 6.272554414 1.027283525 0.831450906 0.654441609 0.061394338 0.114589658 6.540546172 0.032291863 0.015255803 1.22E-08 7.91205198 -0.195832619 VTGTEGSSSTLVDYTSTS(ph)STGGSPVRK ddPTM_A459_MK2206_30min_R1 2 VTGTEGSSSTLVDYTSTSSTGGSPVRK 27 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 VTGTEGSSSTLVDY(0.001)T(0.009)S(0.15)T(0.127)S(0.516)S(0.092)T(0.092)GGS(0.012)PVRK;VTGTEGSSSTLVDYT(0.001)S(0.023)T(0.283)S(0.519)S(0.071)T(0.071)GGS(0.03)PVRK 134.46 2.58E-12 64486000 3070.5 2982.3 3310.5 2688.6 2719.4 2774.6 2967.3 2694.8 2471.01 2186.94 TRUE FALSE 2809.337851 2788.151728 3085.792484 2895.676438 2611.08054 2931.695454 2769.356831 2671.239648 2727.880332 2457.874638 1.142994768 1.134375076 1.255471876 1.178122103 1.062332675 1.192776641 1.126728267 1.086808744 1.109853322 1 11.26319562 -8.697828914 0.389956771 0.987560428 1.176051336 0.519056852 0.047003632 1.430590334 0.526436163 0.089512105 0.040761822 2.01E-09 8.697828914 0.188490908 VTGTEGSSSTLVDYTSTS(ph)STGGSPVRK ddPTM_A459_MK2206_30min_R2 1 VTGTEGSSSTLVDYTSTSSTGGSPVRK 27 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 VTGTEGSSSTLVDYTS(0.011)T(0.048)S(0.257)S(0.257)T(0.257)GGS(0.171)PVRK 103.93 8.65E-08 69799000 26183 36691 33383 32097 33539 26846 31923 33399 24701 29340 TRUE FALSE 28187.59061 34868.97829 34495.97256 29474.57243 32222.09034 27867.64334 27731.47175 37764.36398 26849.44833 28382.6382 0.993127926 1.228531965 1.215389926 1.038471907 1.135274674 0.981855286 0.977057578 1.330544529 0.945981418 1 14.79272108 -5.774735911 24.97572203 1.068845341 1.153968156 0.09393217 0.120354205 545.6621252 1024950.729 0.033343236 0.049789895 1.68E-06 5.774735911 0.085122814 VTGTEGSSSTLVDYTSTSS(ph)TGGSPVRK ddPTM_A459_MK2206_30min_R2 1 VTGTEGSSSTLVDYTSTSSTGGSPVRK 27 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 VTGTEGSSSTLVDYT(0.011)S(0.036)T(0.042)S(0.114)S(0.366)T(0.366)GGS(0.064)PVRK 86.261 2.89E-05 13019000 9487.2 13309 10963 14162 11177 11228 15449 12324 10981 16336 TRUE FALSE 10213.54733 12648.09441 11328.50095 13004.9193 10738.13482 11655.28941 13420.52774 13934.78911 11936.10753 15802.95766 0.646306062 0.800362482 0.716859539 0.822942109 0.679501588 0.737538482 0.849241518 0.881783614 0.755308455 1 13.94790698 -14.52287875 0.113832836 1.776342066 0.641250694 0.607645931 0.062443418 111.3030509 0.831342823 19.83350976 0.704417473 3.00E-15 14.52287875 -1.135091372 VTGTEGSSSTLVDYTSTSSTGGS(ph)PVRK ddPTM_A459_MK2206_30min_R2 1 VTGTEGSSSTLVDYTSTSSTGGSPVRK 27 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 VTGTEGSSSTLVDYTS(0.039)T(0.029)S(0.19)S(0.051)T(0.239)GGS(0.452)PVRK 136.24 2.20E-12 66120000 16485 17571 17189 15994 15100 13705 19933 15109 14461 15290 TRUE FALSE 17747.10427 16698.44969 17762.07268 14687.23904 14507.09813 14226.55338 17315.77316 17083.79818 15718.79164 14791.08855 1.199851127 1.128953399 1.200863116 0.992978913 0.980799897 0.96183275 1.170689574 1.155006146 1.062720407 1 13.85244061 -5.752685355 24.99855506 1.051683807 1.171795653 0.426038134 0.069023484 224.261764 640410.1115 0.021150747 0.03591405 1.77E-06 5.752685355 0.120111845 VTIAQGGVLPNIQAVLLPK ddPTM_A459_MK2206_30min_R1 1 VTIAQGGVLPNIQAVLLPK 19 0 H0YFX9;A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908 H0YFX9 H2AFJ;HIST1H2AJ;HIST1H2AH;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB Histone H2A;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E 0 161.04 2.13E-05 54187000 1352 1488.9 1506.5 1353.9 1516.7 1330.5 1444.5 1286 1378.8 1114.8 FALSE TRUE 1237.0053 1391.972339 1404.242977 1458.177613 1456.286627 1405.83176 1348.140041 1274.756638 1522.131194 1252.90984 0.987305918 1.110991625 1.120785337 1.163832836 1.162323561 1.122053411 1.076007225 1.017436847 1.214876877 1 10.29106689 -10.1181282 13.7504152 0.999983529 1.108831522 0.202462718 0.06453947 0 0 0.0623634 0.015125346 7.62E-11 10.1181282 0.108847993 VTIPPPSSSVAIS(ph)NHVTPPPIPK ddPTM_A459_MK2206_30min_R1 1 VTIPPPSSSVAISNHVTPPPIPK 23 0 F5H2U7;A0A1W2PRW5;A0A1W2PNT6;F5GYH1;A0A1W2PRM0;A0A1W2PRL5;A0A1W2PR09;Q8NC96 F5H2U7 NECAP1 Adaptin ear-binding coat-associated protein 1 1 VTIPPPS(0.19)S(0.19)S(0.045)VAIS(0.305)NHVT(0.271)PPPIPK 75.017 0.0006225 13173000 2928 1309.3 2099.8 1542.5 3863 3413.9 3607.6 2413.5 1542.3 1773 TRUE FALSE 2678.958224 1224.064332 1957.271426 1661.303617 3709.12853 3607.192068 3366.943586 2392.399024 1702.627604 1992.652625 1.344418084 0.614288871 0.982244171 0.833714615 1.861402476 1.810246313 1.689679146 1.200610178 0.854452794 1 10.96047452 -6.235883082 24.58694121 1.447485461 0.922894947 0.281020148 0.354803327 778.703921 749167.2049 0.110099345 0.142080363 5.81E-07 6.235883082 -0.524590515 VTIPPPSSSVAISNHVT(ph)PPPIPK ddPTM_A459_MK2206_30min_R1 1 VTIPPPSSSVAISNHVTPPPIPK 23 0 F5H2U7;A0A1W2PRW5;A0A1W2PNT6;F5GYH1;A0A1W2PRM0;A0A1W2PRL5;A0A1W2PR09;Q8NC96 F5H2U7 NECAP1 Adaptin ear-binding coat-associated protein 1 1 VTIPPPS(0.166)S(0.166)S(0.041)VAIS(0.304)NHVT(0.322)PPPIPK 63.69 0.0073593 12144000 7143.2 3251.3 4701.8 3050.8 9900.2 8027.9 8591.2 6530.7 3534.9 3136.7 TRUE FALSE 6535.63333 3039.639779 4382.654916 3285.773145 9505.85407 8482.43276 8018.096724 6473.602778 3902.365505 3525.298077 1.853923608 0.862236246 1.243201233 0.93205541 2.696468175 2.406160437 2.274445039 1.836327776 1.106960438 1 11.78352953 -6.237968022 24.97626289 1.973901037 1.198549043 0.243692118 0.559813285 1007.904855 1072528.367 0.167366042 0.2159359 5.78E-07 6.237968022 -0.775351994 VTIPPPSSSVAISNHVT(ph)PPPIPK ddPTM_A459_MK2206_30min_R2 2 VTIPPPSSSVAISNHVTPPPIPK 23 0 F5H2U7;A0A1W2PRW5;A0A1W2PNT6;F5GYH1;A0A1W2PRM0;A0A1W2PRL5;A0A1W2PR09;Q8NC96 F5H2U7 NECAP1 Adaptin ear-binding coat-associated protein 1 1 VTIPPPS(0.057)S(0.057)S(0.057)VAIS(0.243)NHVT(0.585)PPPIPK;VTIPPPSSSVAIS(0.044)NHVT(0.955)PPPIPK 77.241 0.0010669 20467000 32112 82927 59641 107074 91398 120706 101602 70475 98546 51945 TRUE FALSE 34570.51941 78808.96577 61629.40117 98325.71169 87809.25528 125299.5514 88261.53535 79686.32448 107117.3529 50250.0389 0.687970003 1.568336413 1.226454795 1.956729066 1.747446513 2.493521481 1.756447105 1.585796274 2.131686966 1 15.61683709 -4.630381605 0.960495299 1.845915516 2.11E-13 0.380335015 0.400205876 2.604687956 1.577191875 0.129195438 5.358765583 2.34E-05 4.630381605 -1.845915516 VTKNEEPS(ph)EEEIDAPKPK ddPTM_A459_MK2206_30min_R1 1 VTKNEEPSEEEIDAPKPK 18 2 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 VTKNEEPS(1)EEEIDAPKPK 111.38 0.001482 87717000 3657 4371.7 4208.1 4846.1 2861.8 2754.2 2348.4 3526.2 2356.7 1091.7 TRUE FALSE 3345.952946 4087.101535 3922.465896 5219.347462 2747.808446 2910.140424 2191.742521 3495.370805 2601.687399 1226.948038 2.727053504 3.331112165 3.196929108 4.253927062 2.239547529 2.371853032 1.786336873 2.848833608 2.120454427 1 10.26085844 -6.388946446 8.231880971 2.146321642 3.359425075 0.561485269 0.567213464 0.23347071 14.51669211 0.17047181 0.193235903 4.08E-07 6.388946446 1.213103433 VTKNEEPS(ph)EEEIDAPKPK ddPTM_A459_MK2206_30min_R2 4 VTKNEEPSEEEIDAPKPK 18 2 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 VT(0.024)KNEEPS(0.976)EEEIDAPKPK;VTKNEEPS(1)EEEIDAPKPK;VT(0.001)KNEEPS(0.999)EEEIDAPKPK;VT(0.002)KNEEPS(0.998)EEEIDAPKPK 90.592 0.0064301 138201000 286685 541005 414001 421544 533137 321476 607643 423140 409641 423832 TRUE FALSE 308633.824 514139.4784 427803.5867 387102.5067 512203.3626 333709.9944 527858.7442 478445.8509 445270.8337 410002.3966 0.752761024 1.253991398 1.043417283 0.944146937 1.249269192 0.813922058 1.287452826 1.166934279 1.086020076 1 18.64527282 -7.288657371 24.98821045 1.14901294 1.030152125 0.111448225 0.165846379 1752.905485 1609294.324 0.065693451 0.044302521 5.14E-08 7.288657371 -0.118860815 VTLELGGK ddPTM_A459_MK2206_30min_R2 1 VTLELGGK 8 0 P00352;H0Y2X5;H0YMG7;O94788-4;P05091-2;O94788-2;O94788-3;P47895;P30837;P05091;O94788 P00352 ALDH1A1;ALDH1A3;ALDH1A2;ALDH2;ALDH1B1 "Retinal dehydrogenase 1;Retinal dehydrogenase 2;Aldehyde dehydrogenase, mitochondrial;Aldehyde dehydrogenase family 1 member A3;Aldehyde dehydrogenase X, mitochondrial" 0 134.81 0.037573 13826000 133000 166110 122490 141840 126780 138160 142320 130200 114120 148790 FALSE TRUE 143182.5823 157861.2189 126573.7555 130251.2183 121801.9802 143417.7756 123633.213 147217.587 124045.9513 143934.9945 0.994772555 1.096753569 0.87938139 0.90493086 0.846229095 0.99640658 0.858951734 1.022806077 0.861819266 1 17.13505787 -5.264484525 24.99962599 0.919317833 1.045763065 0.368246388 0.065158417 238.334528 1956663.774 0.015780669 0.035231376 5.44E-06 5.264484525 0.126445232 VTLLEGDHVR ddPTM_A459_MK2206_30min_R2 1 VTLLEGDHVR 10 0 O75534;O75534-4;O75534-2;O75534-3;E9PLT0 O75534 CSDE1 Cold shock domain-containing protein E1 0 150.15 0.001013 1556200 8492.2 11305 9602.4 11157 8221.8 10303 11226 8493.8 7576.6 9779.4 FALSE TRUE 9142.369361 10743.61014 9922.539223 10245.43741 7898.970821 10695.08788 9752.012715 9603.968824 8235.598973 9460.298979 0.96639328 1.135652284 1.048861061 1.082992983 0.834959956 1.130523243 1.030835573 1.015186607 0.870543203 1 13.20767006 -8.086787719 6.90758816 0.935841828 1.034696947 0.165049764 0.086530752 0.44793489 30.25480014 0.057592275 0.021536218 8.19E-09 8.086787719 0.098855119 VTLSFPS(ph)T(ph)LQT(ph)GTGT(ph)LK ddPTM_A459_MK2206_30min_R2 1 VTLSFPSTLQTGTGTLK 17 0 E9PJY4;E9PPD4;E9PP11;E9PLK3;P55786-2;P55786;A6NEC2-3;A6NEC2 E9PJY4 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein 4 VT(0.046)LS(0.105)FPS(0.924)T(0.924)LQT(0.591)GT(0.418)GT(0.991)LK 49.988 0.045252 13208000 17333 25845 38990 22073 72101 65937 36914 34116 46991 16047 TRUE FALSE 18660.02781 24561.57488 40289.90714 20269.56529 69269.95246 68446.27874 32067.14746 38575.07834 51078.19224 15523.3877 1.202058994 1.582230332 2.595432641 1.305743674 4.462296103 4.409235925 2.065731274 2.484965207 3.290402405 1 13.92215581 -6.228261241 24.99067937 3.054891779 1.731004161 0.266411406 1.030841277 894.1008172 673461.1464 0.310459872 0.400777369 5.91E-07 6.228261241 -1.323887618 VTLT(ph)PDSK ddPTM_A459_MK2206_30min_R2 1 VTLTPDSK 8 0 C9J5X9;Q8NB91 C9J5X9 FANCB Fanconi anemia group B protein 1 VTLT(1)PDSK 103.26 0.025671 0 45223 50624 50101 54104 47095 41471 57755 40808 38210 57146 TRUE FALSE 48685.30765 48110.08577 51771.34233 49683.53013 45245.81367 43049.20797 50171.69912 46141.74571 41533.43673 55281.3307 0.880682629 0.870277274 0.936506804 0.898739764 0.818464626 0.77872959 0.907570395 0.8346714 0.751310365 1 15.75450472 -6.248055998 23.35940206 0.839660528 0.897528833 0.10177724 0.06697774 648.3470224 1131624.003 0.019080748 0.024478103 5.65E-07 6.248055998 0.057868305 VTLT(ph)SEEEAR ddPTM_A459_MK2206_30min_R2 1 VTLTSEEEAR 10 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 1 VT(0.001)LT(0.5)S(0.5)EEEAR 98.898 0.044598 3154600 27701 31725 27622 34450 36402 32382 29946 30272 28516 28913 TRUE FALSE 29821.80986 30149.58263 28542.90369 31635.3248 34972.67457 33614.3197 26014.05423 34228.65434 30996.27013 27969.57118 1.066223349 1.077942255 1.020498438 1.131062203 1.250382938 1.201817485 0.930084128 1.223781878 1.108213992 1 14.77157051 -5.781257455 23.82949299 1.130920634 1.057193455 0.087106443 0.093685923 307.1017962 369261.4335 0.026598929 0.039526363 1.65E-06 5.781257455 -0.073727179 VTLTSEEEAR ddPTM_A459_MK2206_30min_R1 4 VTLTSEEEAR 10 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 ;;; 218.58 0.0024614 79486800 6186.3 6653.2 7087.8 5745.7 6614.9 5694 6524.4 6163.6 5466.2 4837.7 FALSE TRUE 5660.122699 6220.075471 6606.699884 6188.23481 6351.414526 6016.389359 6089.16918 6109.712295 6034.431051 5437.030799 1.041031936 1.144020643 1.215130119 1.138164384 1.168177036 1.106557896 1.119943845 1.123722216 1.109876194 1 12.40860329 -9.413082146 0.566540292 0.991273524 1.141120819 0.472885839 0.04176974 3.167249898 1.314713068 0.106105632 0.018949295 3.86E-10 9.413082146 0.149847295 VTLTSEEEAR ddPTM_A459_MK2206_30min_R2 1 VTLTSEEEAR 10 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 142.98 0.015788 12768000 28928 43222 38203 56360 66480 73389 38382 38126 49796 39769 FALSE TRUE 31142.74992 41075.65833 39476.66895 51755.20771 63869.66116 76181.86982 33342.39729 43109.19911 54127.16607 38471.34079 0.809505187 1.067695003 1.026131872 1.345292539 1.660188074 1.980223935 0.866681447 1.120553592 1.406947742 1 15.23149649 -5.722049137 3.946548983 1.367326588 0.963750707 0.234896165 0.307277315 0.335838356 11.02224211 0.092741229 0.161214389 1.90E-06 5.722049137 -0.40357588 VTLYNTDQDGS(ph)DSPR ddPTM_A459_MK2206_30min_R2 2 VTLYNTDQDGSDSPR 15 0 C9JXI1;C9JVP0;Q9UPW0-2;Q9UPW0 C9JXI1 FOXJ3 Forkhead box protein J3 1 VTLYNT(0.164)DQDGS(0.825)DS(0.011)PR;VTLYNTDQDGS(0.696)DS(0.304)PR 180.02 2.01E-05 15217000 101507 123286 84940 109776 104540 105074 95920 78430 77400 75746 TRUE FALSE 109278.454 117163.7965 87771.85721 100806.9496 100435.2343 109072.6647 83325.58878 88681.07029 84132.11209 73274.41422 1.491358957 1.598972817 1.197851366 1.375745555 1.370672634 1.488550483 1.137171681 1.210259696 1.148178569 1 16.16102191 -5.39297237 0.111184776 0.758336642 2.10226484 0.635331875 0.109749921 25.06570242 0.571957385 1.707207526 5.883695344 4.05E-06 5.39297237 1.343928198 VTLYNTDQDGSDS(ph)PR ddPTM_A459_MK2206_30min_R1 1 VTLYNTDQDGSDSPR 15 0 C9JXI1;C9JVP0;Q9UPW0-2;Q9UPW0 C9JXI1 FOXJ3 Forkhead box protein J3 1 VTLYNTDQDGSDS(1)PR 252.37 3.20E-28 13262000 1470.7 1235 1161.7 1234.3 1332.6 1012.1 1179.6 1184.4 884.72 1176.7 TRUE FALSE 1345.609242 1154.601276 1082.847041 1329.366 1279.51972 1069.404227 1100.911036 1174.044916 976.68981 1322.47848 1.017490464 0.87305865 0.818801256 1.00520804 0.967516477 0.808636393 0.832460455 0.887761074 0.738529832 1 10.36902853 -6.761774788 24.99999976 0.845149048 0.930182924 0.19451427 0.083048585 15.22571359 1134798.724 0.027973898 0.026214156 1.73E-07 6.761774788 0.085033876 VTLYNTDQDGSDS(ph)PR ddPTM_A459_MK2206_30min_R2 3 VTLYNTDQDGSDSPR 15 0 C9JXI1;C9JVP0;Q9UPW0-2;Q9UPW0 C9JXI1 FOXJ3 Forkhead box protein J3 1 VTLYNTDQDGS(0.14)DS(0.86)PR;VTLYNTDQDGS(0.005)DS(0.995)PR;VTLYNTDQDGS(0.009)DS(0.991)PR 216.77 3.45E-09 13017700 61641 54266 49962 44540 52128 46659 57264 45507 44858 60801 TRUE FALSE 66360.28235 51571.22935 51627.70814 40900.93952 50081.1928 48434.64094 49745.16801 51454.92115 48759.66776 58817.06835 1.128248725 0.876807206 0.877767451 0.695392352 0.851473802 0.823479345 0.845760753 0.874829749 0.829005408 1 15.84394726 -4.698562707 2.642560259 0.839439832 1.228802691 0.576736705 0.070650758 0.460094777 3.402223011 0.017484676 0.438078723 2.00E-05 4.698562707 0.389362859 VTMILQS(ph)PSFR ddPTM_A459_MK2206_30min_R2 2 VTMILQSPSFR 11 0 P35612;A0A1C7CYY0;P35612-5;P35612-6;P35612-4;P35612-3;C9J299;C9J080;C9JTM0;P35612-7;P35612-2;P35612-8;P35612-9 P35612 ADD2 Beta-adducin 1 VTMILQS(0.879)PS(0.121)FR;VTMILQS(0.5)PS(0.5)FR 119.88 0.0048917 4487700 27329 24657 22889 25883 26470 25419 26847 21716 22400 22331.7 TRUE FALSE 29421.32925 23432.56923 23652.10784 23768.2761 25430.6548 26386.33786 23321.95665 24554.35576 24348.31151 21603.01846 1.361908259 1.08468959 1.094851994 1.100229403 1.177180626 1.22141903 1.079569353 1.136616895 1.127079142 1 14.39894528 -14.52287875 0.106459954 0.545797897 1.235038722 0.310352969 0.077609173 249.955237 1.777452925 25.13410952 1.098129539 3.00E-15 14.52287875 0.689240825 VTNDIS(ph)PESS(ph)PGVGR ddPTM_A459_MK2206_30min_R1 1 VTNDISPESSPGVGR 15 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 2 VTNDIS(1)PES(0.013)S(0.987)PGVGR 159.4 0.0037006 0 1933.2 1866.4 1977.6 1459.4 2565.6 1920.1 2215 1977.6 1801.1 1789.5 TRUE FALSE 1768.771188 1744.897021 1843.366022 1571.803241 2463.406719 2028.814403 2067.241391 1960.310052 1988.33079 2011.19677 0.879462027 0.8675914 0.916551801 0.781526335 1.224846199 1.008759776 1.027866304 0.97469829 0.98863066 1 10.97383852 -6.235617535 24.9999485 1.034286444 0.865681281 0.580755014 0.073266685 582.7290102 564181.0163 0.021655799 0.027948369 5.81E-07 6.235617535 -0.168605163 VTNDIS(ph)PESS(ph)PGVGR ddPTM_A459_MK2206_30min_R2 3 VTNDISPESSPGVGR 15 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 2 VTNDIS(1)PES(0.019)S(0.981)PGVGR;VTNDIS(0.991)PES(0.028)S(0.981)PGVGR;VTNDIS(0.999)PES(0.063)S(0.937)PGVGR 157.83 0.0027546 58436000 206600 245041 243995 291740 264147 277869 256894 199562 230372 245179 TRUE FALSE 222417.4548 232872.6203 252129.6715 267903.9088 253775.2615 288443.4995 223163.5092 225645.4386 250409.3401 237178.8293 0.937762681 0.981844041 1.063036158 1.129543938 1.069974341 1.216143533 0.940908216 0.951372596 1.055782849 1 17.85561571 -10.41757715 8.771773421 1 1.040939055 0.01738863 0.085008827 6.28E-11 1.43E-18 0.087805648 0.021295998 3.82E-11 10.41757715 0.040939055 VTNDISPES(ph)SPGVGR ddPTM_A459_MK2206_30min_R1 3 VTNDISPESSPGVGR 15 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 VT(0.028)NDIS(0.045)PES(0.918)S(0.009)PGVGR;VT(0.222)NDIS(0.009)PES(0.767)S(0.002)PGVGR;VT(0.291)NDIS(0.051)PES(0.647)S(0.012)PGVGR 229.92 7.44E-14 615014000 10226.8 9991.3 9252.9 8193.3 10491.2 9735.8 9809.5 8633.8 8359.5 8101.1 TRUE FALSE 9356.956957 9340.864554 8624.838928 8824.349386 10073.31329 10287.03258 9155.126153 8558.315597 9228.49994 9104.725428 1.027703365 1.025935887 0.94729259 0.969205437 1.106382984 1.129856432 1.005535667 0.939986127 1.013594535 1 13.1523998 -7.520876254 24.87334689 0.98062637 1.03347246 0.146925615 0.054191313 157.2911435 1953824.294 0.028160406 0.016598006 3.01E-08 7.520876254 0.05284609 VTNDISPES(ph)SPGVGR ddPTM_A459_MK2206_30min_R2 1 VTNDISPESSPGVGR 15 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 VT(0.04)NDIS(0.027)PES(0.928)S(0.006)PGVGR 154.47 0.0001876 166760000 36416 43822 44052 54448 52075 45137 46948 40051 39261 44071 TRUE FALSE 39204.03696 41645.8632 45520.67169 49999.42423 50030.27384 46854.72016 40783.67121 45285.80322 42675.85081 42632.96688 0.919570929 0.97684647 1.067734081 1.172787819 1.173511428 1.099025557 0.956622872 1.062224999 1.001005887 1 15.37968184 -10.6388789 14.5967006 1.000000854 1.052845393 0.026354195 0.081775768 0 0 0.087706811 0.021272026 2.30E-11 10.6388789 0.052844538 VTNGAFTGEIS(ph)PGMIK ddPTM_A459_MK2206_30min_R1 2 VTNGAFTGEISPGMIK 16 0 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 1 VTNGAFT(0.061)GEIS(0.939)PGMIK;VTNGAFT(0.002)GEIS(0.998)PGMIK 156.08 8.63E-05 47358000 6511.3 6284.2 7009.1 5796 7150.1 6076.8 6660.5 6686.5 5938.7 5945.7 TRUE FALSE 5957.479743 5875.097438 6533.34182 6242.408924 6865.296376 6420.863165 6216.190198 6628.040635 6556.049117 6682.298204 0.89153156 0.879203121 0.977708809 0.934170959 1.027385514 0.960876478 0.93024735 0.991880403 0.981106936 1 12.70612865 -5.262164872 24.99428124 0.97338179 0.885367334 0.627712915 0.027705557 38.45093558 1324748.994 0.007150103 0.016455087 5.47E-06 5.262164872 -0.088014456 VTNGAFTGEIS(ph)PGMIK ddPTM_A459_MK2206_30min_R2 2 VTNGAFTGEISPGMIK 16 0 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 1 VTNGAFT(0.111)GEIS(0.889)PGMIK;VTNGAFT(0.003)GEIS(0.997)PGMIK 108.25 0.0031764 20846000 80237 96848 101181 96165 106498 95760 102689 75465 97514 97456 TRUE FALSE 86380.00641 92038.66915 104554.324 88308.01188 102316.3534 99404.2139 89205.81095 85328.53461 105995.5915 94276.0187 0.916245803 0.976268095 1.10902354 0.936696448 1.085285047 1.054395543 0.946219539 0.905092682 1.124311282 1 16.52460321 -3.145172072 6.796648404 1.004822098 0.968816105 0 0.077957092 0 0 0.017435781 0 0.00071586 3.145172072 -0.036005993 VTPLPSLAS(ph)PAVPAPGYCSR ddPTM_A459_MK2206_30min_R2 1 VTPLPSLASPAVPAPGYCSR 20 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3;H7C3V8 C9JWC4 HJURP Holliday junction recognition protein 1 VTPLPSLAS(1)PAVPAPGYCSR 186.36 1.24E-15 10089000 19778 28495 24010 30455 36504 33726 27149 21869 26988 33424 TRUE FALSE 21292.21889 27079.97974 24810.48142 27966.72908 35070.66954 35009.46656 23584.30369 24727.35339 29335.36746 32333.37762 0.658521332 0.837523999 0.767333426 0.864949199 1.084658397 1.082765524 0.729410455 0.764762459 0.907278163 1 14.9807366 -5.85579736 4.073145249 0.918567156 0.761935601 0.30035471 0.117347573 0.340442653 10.45385367 0.03745199 0.05841825 1.39E-06 5.85579736 -0.156631555 VTPRPQQTSAS(ph)SPSSVNSR ddPTM_A459_MK2206_30min_R1 1 VTPRPQQTSASSPSSVNSR 19 1 Q9ULD2;Q9ULD2-5;H0YC63;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 VTPRPQQT(0.008)S(0.008)AS(0.491)S(0.491)PSSVNSR 149.86 0.00013953 8686800 1272.3 929.03 969.38 710.93 1223 1100.2 1019.4 847.86 862.81 918.1 TRUE FALSE 1164.084204 868.5499781 903.5811864 765.6859518 1174.28532 1162.492373 951.397686 840.4472494 952.5021871 1031.841159 1.128162211 0.841747754 0.875697949 0.742057966 1.138048536 1.126619502 0.922038899 0.814512236 0.923109316 1 10.01100519 -4.744563855 24.8024235 0.930327243 1.128162855 0.192033887 0.120972316 1768.422754 2598945.876 0.032630144 0.904545492 1.80E-05 4.744563855 0.197835612 VTPRPQQTSAS(ph)SPSSVNSR ddPTM_A459_MK2206_30min_R2 2 VTPRPQQTSASSPSSVNSR 19 1 Q9ULD2;Q9ULD2-5;H0YC63;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 VTPRPQQT(0.007)S(0.046)AS(0.674)S(0.215)PS(0.023)S(0.033)VNS(0.003)R;VTPRPQQTS(0.001)AS(0.483)S(0.483)PS(0.026)S(0.006)VNSR 83.31 0.0025394 66785000 16939 20443 16408.9 23892.1 16502.6 20870.2 20544.8 16873.3 16454.5 16879.2 TRUE FALSE 18235.86286 19427.83035 16955.96454 21940.039 15854.62501 21664.43009 17847.24308 19078.69824 17885.68267 16328.43309 1.116816462 1.189815964 1.038431823 1.343670816 0.970982636 1.326791736 1.093016273 1.168434114 1.095370424 1 13.99509873 -8.61950891 2.030738793 0.999887095 1.15760553 0.162342613 0.109278459 0.768708484 6.913055666 0.094807554 0.026324438 2.40E-09 8.61950891 0.157718434 VTPRPQQTSASS(ph)PSSVNSR ddPTM_A459_MK2206_30min_R2 3 VTPRPQQTSASSPSSVNSR 19 1 Q9ULD2;Q9ULD2-5;H0YC63;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 VTPRPQQT(0.002)S(0.025)AS(0.257)S(0.553)PS(0.079)S(0.079)VNS(0.005)R;VTPRPQQT(0.003)S(0.009)AS(0.07)S(0.872)PS(0.033)S(0.013)VNSR;VT(0.116)PRPQQT(0.075)S(0.075)AS(0.185)S(0.543)PS(0.006)SVNSR 95.209 0.00096074 69774100 14294.5 17955.2 13205.7 17723 14368.2 17513.9 17221.6 14674.5 14018.9 13444.3 TRUE FALSE 15388.89791 17063.57088 13645.97145 16274.97421 13804.03227 18180.40374 14960.38323 16592.50754 15238.23858 13005.61359 1.183250433 1.312015827 1.049237035 1.251380728 1.061390312 1.397888966 1.150301993 1.275795826 1.171666256 1 13.66684685 -8.555877177 19.80064358 0.999999995 1.209795645 0.275155423 0.101961149 842.1016404 505302.5703 0.091560922 0.023640928 2.78E-09 8.555877177 0.20979565 VTPRPQQTSASSPS(ph)SVNSR ddPTM_A459_MK2206_30min_R1 1 VTPRPQQTSASSPSSVNSR 19 1 Q9ULD2;Q9ULD2-5;H0YC63;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 VTPRPQQTSAS(0.02)S(0.091)PS(0.648)S(0.233)VNS(0.008)R 96.579 0.00089233 22601000 1178.7 935.46 1000.9 918.39 1133.1 871.82 1123.1 1110.3 826.55 909.59 TRUE FALSE 1078.445375 874.561384 932.9616967 989.1245569 1087.966228 921.181695 1048.180048 1100.592764 912.4728303 1022.276876 1.054944507 0.85550344 0.912631126 0.967570117 1.064257886 0.901107827 1.025338705 1.076609273 0.892588741 1 9.997570277 -5.995604367 16.80377644 0.996117644 0.933743447 0.091305208 0.072796266 4.504518126 17188.38936 0.019963916 0.029212507 1.01E-06 5.995604367 -0.062374197 VTPTEEHVEGPLPS(ph)PVTNGTSPAQLNGGSACSSR ddPTM_A459_MK2206_30min_R1 1 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSR 34 0 H3BN50;Q15599-3;H3BUQ9;H3BQS0;Q15599;Q15599-2 H3BN50;Q15599-2 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 VTPTEEHVEGPLPS(0.999)PVT(0.001)NGTSPAQLNGGSACSSR 128.92 3.20E-25 11540000 822.24 785.68 681.08 436.52 862.7 577.7 735.23 586.49 515.17 540.56 TRUE FALSE 752.3041702 734.5320892 634.8501872 470.140846 828.3368322 610.4088748 686.1841482 581.3623798 568.7237651 607.5286538 1.238302367 1.209049293 1.044971596 0.773857896 1.36345311 1.004740881 1.129467958 0.956929975 0.936126653 1 9.246808644 -5.255173066 5.132694758 1.030046794 1.227388152 0.236186555 0.142356408 0.250984862 21.85405994 0.036918914 0.092243896 5.56E-06 5.255173066 0.197341357 VTPTEEHVEGPLPS(ph)PVTNGTSPAQLNGGSACSSR ddPTM_A459_MK2206_30min_R2 2 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSR 34 0 H3BN50;Q15599-3;H3BUQ9;H3BQS0;Q15599;Q15599-2 H3BN50;Q15599-2 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 VTPTEEHVEGPLPS(0.835)PVT(0.082)NGT(0.075)S(0.002)PAQLNGGS(0.006)ACSSR;VTPTEEHVEGPLPS(0.93)PVT(0.066)NGT(0.002)S(0.001)PAQLNGGSACSSR 92.766 2.49E-09 14669400 25231 36965 41142 38686 33081 34987 35380 31454 33741 32719 TRUE FALSE 27162.70476 35129.37185 42513.65375 35525.23005 31782.07372 36318.4548 30734.5635 35565.1458 36675.73119 31651.38171 0.858183855 1.109884307 1.343184766 1.122391129 1.004129109 1.147452428 0.971033865 1.123652235 1.158740289 1 14.94998086 -6.047541364 24.68792343 1.071985555 1.125768352 0.017136239 0.124495945 1430.904422 743056.1957 0.038016417 0.049080431 8.96E-07 6.047541364 0.053782797 VTPTEEHVEGPLPSPVT(ph)NGTSPAQLNGGSACSSR ddPTM_A459_MK2206_30min_R2 1 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSR 34 0 H3BN50;Q15599-3;H3BUQ9;H3BQS0;Q15599;Q15599-2 H3BN50;Q15599-2 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 VTPTEEHVEGPLPS(0.005)PVT(0.66)NGT(0.139)S(0.108)PAQLNGGS(0.054)ACS(0.015)S(0.019)R 83.198 1.48E-06 10676000 24152 28562 30251 38457 25992 32296 30227 25809 27869 28754 TRUE FALSE 26001.09569 27143.65261 31259.55324 35314.94008 24971.42348 33525.04691 26258.15859 29182.32492 30292.99524 27815.75933 0.934761312 0.975837197 1.123807294 1.269601871 0.897743728 1.205253702 0.94400294 1.049129185 1.08905872 1 14.76361487 -5.102065154 5.020777611 1.07470043 0.9438393 0.166848043 0.10604988 0.352153224 13.39444339 0.026400025 0.076439751 7.91E-06 5.102065154 -0.13086113 VTPTEEHVEGPLPSPVTNGT(ph)SPAQLNGGSACSSR ddPTM_A459_MK2206_30min_R2 2 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSR 34 0 H3BN50;Q15599-3;H3BUQ9;H3BQS0;Q15599;Q15599-2 H3BN50;Q15599-2 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 VTPTEEHVEGPLPSPVT(0.201)NGT(0.59)S(0.207)PAQLNGGS(0.001)ACSSR;VTPTEEHVEGPLPS(0.001)PVT(0.217)NGT(0.734)S(0.047)PAQLNGGSACSSR 111.23 3.27E-14 35266000 36698 61249 46107 65165 50148 54485 59704 41287 48632 52113 TRUE FALSE 39507.6271 58207.46372 47644.18437 59840.81105 48178.93755 56558.46485 51864.79308 46683.35266 52861.92345 50412.55708 0.783686236 1.154622322 0.945085652 1.187021935 0.955693191 1.12191224 1.028807029 0.926026279 1.048586434 1 15.62149551 -4.744622473 24.99274475 1.039619105 0.783685483 0.451228815 0.085074067 909.6335378 1351795.739 0.019768983 0.55076567 1.80E-05 4.744622473 -0.255933621 VTQGAAS(ph)PGHGIQEK ddPTM_A459_MK2206_30min_R2 2 VTQGAASPGHGIQEK 15 0 Q9HB58-7;G5E9C0;Q9HB58-2;Q9HB58-5;Q9HB58-3;Q9HB58;Q9HB58-6;Q9HB58-4 Q9HB58-7 SP110 Sp110 nuclear body protein 1 VT(0.005)QGAAS(0.995)PGHGIQEK;VT(0.245)QGAAS(0.755)PGHGIQEK 97.129 0.0097266 12729000 32823 59401 53353 59616 68612 57828 57174 42521 59594 49723 TRUE FALSE 35335.95412 56451.23272 55131.76239 54745.1821 65917.94813 60028.68506 49666.98512 48078.6407 64777.3784 48100.54258 0.734626934 1.173609063 1.146177557 1.138140635 1.370420053 1.247983533 1.032566006 0.999544664 1.346707852 1 15.55376555 -4.760794873 24.93730983 1.165633794 0.734626431 0.513409793 0.124672341 12.66380081 489602.6966 0.03143844 0.18208264 1.73E-05 4.760794873 -0.431007362 VTQHES(ph)DNENEIQIQNK ddPTM_A459_MK2206_30min_R1 3 VTQHESDNENEIQIQNK 17 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 VT(0.054)QHES(0.946)DNENEIQIQNK;VT(0.001)QHES(0.999)DNENEIQIQNK;VTQHES(1)DNENEIQIQNK 196.83 5.57E-08 37508300 11119.8 11300 10839.4 9153.5 10236.9 10300.6 11253.6 9962.3 9140.7 9896.2 TRUE FALSE 10174.00262 10564.36795 10103.65173 9858.504156 9829.142596 10883.81107 10502.89288 9875.200661 10090.90848 11122.21597 0.914746004 0.949843806 0.908420746 0.886379493 0.883739591 0.978564982 0.944316574 0.887880679 0.907274998 1 13.44115664 -6.737746738 24.99992482 0.936644356 0.909668513 0.19075764 0.034535027 541.6375278 571522.0443 0.012006771 0.012000535 1.83E-07 6.737746738 -0.026975843 VTQHES(ph)DNENEIQIQNK ddPTM_A459_MK2206_30min_R2 5 VTQHESDNENEIQIQNK 17 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 VT(0.004)QHES(0.996)DNENEIQIQNK;VT(0.033)QHES(0.967)DNENEIQIQNK;VT(0.063)QHES(0.937)DNENEIQIQNK;VT(0.073)QHES(0.927)DNENEIQIQNK;VT(0.001)QHES(0.999)DNENEIQIQNK 182.98 4.46E-08 125618000 465142 444138 467460 501727 455772 424481 520778 410014 373319 502698 TRUE FALSE 500753.6292 422082.7528 483044.8831 460734.2992 437876.1012 440634.9219 452399.223 463604.2376 405789.6118 486295.0054 1.029732207 0.867956175 0.993316562 0.94743786 0.900433063 0.906106205 0.930297901 0.953339501 0.834451531 1 18.89147225 -4.739400509 24.8873276 0.925967113 1.029732637 0.287513939 0.049023087 2226.267459 2513869.842 0.011523506 0.587125079 1.82E-05 4.739400509 0.103765523 VTQVDGNS(ph)PVR ddPTM_A459_MK2206_30min_R1 1 VTQVDGNSPVR 11 0 B0YIW6;P48444-2;P48444 B0YIW6 ARCN1 Coatomer subunit delta 1 VTQVDGNS(1)PVR 108.66 0.0098426 8112700 2765.1 3173.2 2621.4 2067.5 1611.2 1771.9 2730.6 2152 1323.1 3164.8 TRUE FALSE 2529.913725 2966.624103 2443.466672 2226.739208 1547.022492 1872.223447 2548.446656 2133.185291 1460.64098 3556.879317 0.711273422 0.834052505 0.686969237 0.626037324 0.434938145 0.526366874 0.716483869 0.599735077 0.410652386 1 11.79639631 -9.857313626 10.56472757 0.999995541 0.619532639 0.460399699 0.124580328 0 0 0.131386832 0.031865987 1.39E-10 9.857313626 -0.380462903 VTRS(ph)PPETAAPVEDMAR ddPTM_A459_MK2206_30min_R1 1 VTRSPPETAAPVEDMAR 17 1 A0A2R8Y5V0;Q9Y3L3;A0A3B3IU28;Q6ZT62-2;Q6ZT62 A0A2R8Y5V0 SH3BP1 SH3 domain-binding protein 1 1 VT(0.487)RS(0.512)PPETAAPVEDMAR 87.356 0.0058697 4411600 1607.8 1424.8 1366.6 1270.2 1662.7 1583.4 1619.8 1587 975.72 1144.3 TRUE FALSE 1471.048167 1332.045261 1273.839 1368.031024 1596.471138 1673.05074 1511.746097 1573.125026 1077.149586 1286.064523 1.143836985 1.035753057 0.990493849 1.063734361 1.241361619 1.30090731 1.175482311 1.223208477 0.837554855 1 10.32874731 -3.312845891 15.62270893 1.112998318 44.71566584 0 0.134472046 0 7.07E-18 0.031825644 0 0.00048658 3.312845891 43.60266752 VTRS(ph)PPTQVAISSDSAR ddPTM_A459_MK2206_30min_R1 2 VTRSPPTQVAISSDSAR 17 1 Q6ZUT6;H0YM82;Q6ZUT6-3;Q6ZUT6-4 Q6ZUT6 C15orf52 Uncharacterized protein C15orf52 1 VTRS(0.699)PPT(0.299)QVAISS(0.002)DSAR;VT(0.013)RS(0.904)PPT(0.064)QVAIS(0.004)S(0.013)DS(0.001)AR 197.1 3.89E-07 16529200 2936.4 2641.5 2465.6 2147.47 2609.6 2322 2241.3 2631.9 1536.37 1693.83 TRUE FALSE 2686.64376 2469.53787 2298.241942 2312.868511 2505.654106 2453.469633 2091.786966 2608.889576 1696.081159 1903.674448 1.411293703 1.297248 1.207266265 1.214949601 1.316219855 1.288807357 1.098815487 1.370449437 0.890951266 1 10.89457107 -8.266647151 24.99962073 0.945475591 1.267948524 0.69669516 0.087017812 253.2403893 1215645.385 0.074334521 0.021480748 5.41E-09 8.266647151 0.322472933 VTRS(ph)PPTQVAISSDSAR ddPTM_A459_MK2206_30min_R2 2 VTRSPPTQVAISSDSAR 17 1 Q6ZUT6;H0YM82;Q6ZUT6-3;Q6ZUT6-4 Q6ZUT6 C15orf52 Uncharacterized protein C15orf52 1 VTRS(0.993)PPT(0.006)QVAISSDSAR;VT(0.011)RS(0.985)PPT(0.002)QVAIS(0.001)SDSAR 149.24 0.0014675 3856500 11022.2 16518.9 14351.4 17392.5 19167.2 18236 18505.6 13775.8 17729.7 16986.5 TRUE FALSE 11866.06811 15698.59545 14829.86851 15971.47711 18414.59942 18929.98376 16075.79249 15576.34436 19271.79726 16432.2319 0.72212151 0.955353816 0.902486565 0.971960304 1.12063897 1.152003202 0.978308521 0.947914103 1.172804606 1 14.00424083 -3.967032773 0.692489104 1.054819629 4.56E-17 0.598425989 0.080063165 6.150267125 0.976908402 0.03415006 6.601876238 0.000107887 3.967032773 -1.054819629 VTS(ph)AEIK ddPTM_A459_MK2206_30min_R2 1 VTSAEIK 7 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 VT(0.029)S(0.971)AEIK 95.358 0.023842 6563700 48767 61153 64270 58907 59104 54154 70866 45747 48665 58151 TRUE FALSE 52500.63902 58116.23094 66412.72972 54094.10967 56783.27999 56214.86842 61561.20907 51726.28997 52897.79373 56253.53763 0.933285998 1.033112465 1.180596501 0.961612584 1.00941705 0.999312591 1.094352669 0.919520659 0.940346082 1 15.77965621 -7.776805674 24.99256521 0.947450015 1.031504652 0.211898123 0.067697021 370.5263918 602635.6671 0.037256429 0.01800021 1.67E-08 7.776805674 0.084054637 VTS(ph)GGVSESPSGFSK ddPTM_A459_MK2206_30min_R1 1 VTSGGVSESPSGFSK 15 0 E7EPP6;O14757-2;O14757-3;O14757 E7EPP6 CHEK1 Serine/threonine-protein kinase Chk1 1 VT(0.105)S(0.893)GGVS(0.002)ESPSGFSK 159.41 0.0001378 9776400 5534.4 5795 6289.7 5155.2 5631.5 4898 5233.6 5245 4205.8 4117.5 TRUE FALSE 5063.670218 5417.744447 5862.772688 5552.254397 5407.18543 5175.320527 4884.476093 5199.143518 4643.007961 4627.606986 1.094230827 1.170744288 1.266912403 1.199811137 1.168462544 1.118357834 1.055507978 1.12350585 1.003328065 1 12.17605063 -7.463202304 0.805301627 1.011462465 1.189109288 0.642426615 0.048479167 0.437634505 0.534799697 0.044131054 0.023229699 3.44E-08 7.463202304 0.177646822 VTS(ph)GGVSESPSGFSK ddPTM_A459_MK2206_30min_R2 1 VTSGGVSESPSGFSK 15 0 E7EPP6;O14757-2;O14757-3;O14757 E7EPP6 CHEK1 Serine/threonine-protein kinase Chk1 1 VT(0.156)S(0.844)GGVSESPSGFSK 138.28 0.00039823 16049000 65686 89033 88494 91097 76628 68874 72692 60385 62319 66577 TRUE FALSE 70714.97066 84611.75069 91444.34579 83654.0837 73619.1997 71495.04833 63147.45308 68277.52683 67739.39397 64404.59794 1.097980159 1.313753263 1.419841886 1.298883719 1.143073663 1.110092301 0.980480511 1.060134354 1.05177885 1 15.97487607 -6.569365737 1.979663188 1.033497424 1.294097508 0.670706898 0.080141809 0.20190571 1.605628896 0.031596882 0.033135937 2.70E-07 6.569365737 0.260600084 VTS(ph)PTTYVLDEDEPR ddPTM_A459_MK2206_30min_R1 4 VTSPTTYVLDEDEPR 15 0 J3KNS1;Q9UPW5-2;Q9UPW5;Q9UPW5-3 J3KNS1 AGTPBP1 Cytosolic carboxypeptidase 1 1 VT(0.008)S(0.965)PT(0.018)T(0.009)YVLDEDEPR;VT(0.004)S(0.996)PTTYVLDEDEPR;VT(0.004)S(0.984)PT(0.01)T(0.003)YVLDEDEPR;VT(0.125)S(0.874)PTTYVLDEDEPR 312.67 1.04E-94 28052400 6053.9 5709.95 5324.6 4646.06 6284.7 5001 6086.3 5081.2 4506.91 4417.26 TRUE FALSE 5538.984015 5338.231217 4963.180987 5003.900346 6034.367091 5284.152298 5680.294032 5036.775604 4975.419423 4964.503517 1.115717613 1.075279975 0.999733603 1.007935704 1.215502632 1.064386858 1.144181692 1.014557767 1.002198791 1 12.27743373 -7.901900473 8.386903901 1.003559132 1.08572438 0.293620822 0.059321211 0.348783079 26.208835 0.034089912 0.016317544 1.25E-08 7.901900473 0.082165248 VTS(ph)PTTYVLDEDEPR ddPTM_A459_MK2206_30min_R2 3 VTSPTTYVLDEDEPR 15 0 J3KNS1;Q9UPW5-2;Q9UPW5;Q9UPW5-3 J3KNS1 AGTPBP1 Cytosolic carboxypeptidase 1 1 VT(0.003)S(0.995)PT(0.001)T(0.001)YVLDEDEPR;VT(0.002)S(0.997)PTTYVLDEDEPR;VT(0.004)S(0.949)PT(0.017)T(0.03)YVLDEDEPR 287.54 4.71E-67 14218100 44407.2 49729 49617 51228 51257 55825 57638 41570 43797 46207 TRUE FALSE 47807.04938 47259.53017 51271.20602 47042.50853 49244.39263 57949.45949 50070.06136 47003.34173 47606.38389 44699.26937 1.069526416 1.057277464 1.147025594 1.052422314 1.101682272 1.29642968 1.12015391 1.051546085 1.065037182 1 15.44796363 -7.78323207 5.321645839 1.042086445 1.122812611 0.235735329 0.067514302 0.305580423 23.90960182 0.03947196 0.019472601 1.65E-08 7.78323207 0.080726166 VTS(ph)TQQQTR ddPTM_A459_MK2206_30min_R2 1 VTSTQQQTR 9 0 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30;P49023-2;P49023-3;A0A1B0GU60;P49023-4 A0A1B0GTU4 PXN Paxillin 1 VT(0.027)S(0.968)T(0.005)QQQTR 131.42 0.0036081 18031000 30878 13714 25685 25908 41011 14541 31420 63713 52554 34682 TRUE FALSE 33242.04342 13032.9827 26541.32508 23791.23352 39400.70208 15094.36794 27294.51626 72040.50786 57125.05192 33550.32918 0.990811245 0.388460651 0.791089856 0.709120718 1.174376021 0.449902231 0.813539447 2.147236991 1.702667405 1 15.0340393 -7.693731948 8.535424585 1.691627408 0.745963216 0.569786359 0.339377043 0.16704421 18.98490615 0.152770875 0.087700599 2.02E-08 7.693731948 -0.945664192 VTSLANLIS(ph)PVR ddPTM_A459_MK2206_30min_R2 2 VTSLANLISPVR 12 0 Q7Z628;Q7Z628-2 Q7Z628 NET1 Neuroepithelial cell-transforming gene 1 protein 1 VTSLANLIS(1)PVR;VTSLANLIS(1)PVR 106.76 0.0087674 17329400 39110 38475 34496 42527 42457 38600 45145 28392 37932 42732 TRUE FALSE 42104.29167 36564.38745 35646.07942 39052.40806 40789.92485 40068.95005 39217.40727 32102.93188 41231.25679 41337.65834 1.01854564 0.884529722 0.862314917 0.944717471 0.98674977 0.969308656 0.94870897 0.776602574 0.997426038 1 15.33516905 -4.744984079 24.42844245 0.924983651 1.018546 0.131130855 0.067222217 1496.996036 2222178.888 0.016799409 0.434344274 1.80E-05 4.744984079 0.093562348 VTSSITIYPSDSS(ph)SPR ddPTM_A459_MK2206_30min_R2 1 VTSSITIYPSDSSSPR 16 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 VTSSITIYPS(0.004)DS(0.117)S(0.834)S(0.045)PR 224.55 2.19E-11 4964400 37624 39337 30981 35848 36302 32656 39531 28627 29733 35415 TRUE FALSE 40504.52237 37383.58178 32013.89108 32919.10373 34876.60108 33898.74696 34340.53221 32368.64719 32319.1226 34259.41145 1.182288914 1.091191594 0.934455372 0.960877678 1.018015185 0.989472543 1.002367839 0.944810369 0.943364793 1 15.06421275 -5.028292298 3.357851974 0.975182711 1.175092493 0.856174712 0.027770178 0.086906256 1.948873716 0.007755422 0.032544733 9.37E-06 5.028292298 0.199909781 VTSSITIYPSDSSS(ph)PR ddPTM_A459_MK2206_30min_R2 1 VTSSITIYPSDSSSPR 16 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 VTSSITIYPSDS(0.005)S(0.029)S(0.966)PR 221.34 6.87E-11 5993000 48249 51422 49412 63787 60434 47760 54501 42068 42769 50939 TRUE FALSE 51942.98054 48868.45825 51059.37142 58575.39806 58061.0575 49577.54027 47344.95323 47566.43204 46488.97031 49276.8646 1.054104821 0.991712006 1.0361733 1.188699779 1.178262009 1.006101761 0.960794759 0.965289339 0.94342387 1 15.58862284 -6.986548048 23.78695157 0.96719354 1.087390277 0.507077673 0.057526125 125.506028 221929.2399 0.023259359 0.020499564 1.03E-07 6.986548048 0.120196738 VTSSMS(ph)SPSMQPK ddPTM_A459_MK2206_30min_R1 3 VTSSMSSPSMQPK 13 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VTS(0.003)S(0.128)MS(0.435)S(0.435)PSMQPK;VTSS(0.001)MS(0.333)S(0.333)PS(0.333)MQPK;VTS(0.008)S(0.08)MS(0.811)S(0.08)PS(0.021)MQPK 245.5 1.12E-18 47586400 10369.8 10260.4 10797.2 9821.7 10795.9 9567.1 11387.7 10351.2 9524.4 9565.2 TRUE FALSE 9487.794056 9592.446095 10064.31615 10578.16904 10365.87644 10108.78093 10628.04731 10260.70055 10514.49546 10750.20919 0.882568319 0.892303203 0.936197238 0.983996576 0.964248812 0.940333416 0.988636325 0.954465199 0.978073568 1 13.39207711 -5.400625633 2.539425788 0.969841834 0.884459419 0.805167861 0.016677704 0.117573546 1.449193685 0.004475259 0.011861304 3.98E-06 5.400625633 -0.085382414 VTSSMS(ph)SPSMQPK ddPTM_A459_MK2206_30min_R2 7 VTSSMSSPSMQPK 13 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VTSSMS(0.499)S(0.499)PS(0.002)MQPK;VTSSMS(0.5)S(0.5)PSMQPK;VTSSMS(0.904)S(0.095)PS(0.001)MQPK;VTSS(0.001)MS(0.94)S(0.058)PSMQPK;VTS(0.001)S(0.01)MS(0.84)S(0.075)PS(0.075)MQPK;VTS(0.012)S(0.119)MS(0.788)S(0.078)PS(0.003)MQPK;VTS(0.002)S(0.01)MS(0.972)S(0.013)PS(0.004)MQPK 272.59 1.99E-38 193312000 383690 404031 419660 441387 441972 396008 473076 368569 408290 458243 TRUE FALSE 413065.6014 383967.4081 433651.2549 405324.2702 424617.9585 411078.3619 410960.5529 416742.2338 443802.3262 443290.5684 0.931816806 0.866175451 0.97825509 0.914353472 0.957877268 0.927333878 0.927068118 0.940110761 1.001154452 1 18.75789314 -8.219696484 3.732658384 1.0025642 0.929205149 0.51664526 0.027310067 0.176446768 4.953706363 0.022105095 0.006889714 6.03E-09 8.219696484 -0.073359051 VTSSMSS(ph)PSMQPK ddPTM_A459_MK2206_30min_R1 2 VTSSMSSPSMQPK 13 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VTSS(0.001)MS(0.093)S(0.898)PS(0.008)MQPK;VTSSMS(0.205)S(0.792)PS(0.003)MQPK 134.75 0.0026653 42554100 11066.4 10297.5 10975.5 10062.2 11082.1 10582.2 12463.7 11746.6 11228 10604.2 TRUE FALSE 10125.14457 9627.130878 10230.51364 10837.19239 10640.67649 11181.35502 11632.26931 11643.90071 12395.19078 11917.92835 0.849572532 0.807785598 0.858413756 0.909318471 0.892829372 0.938196194 0.97603115 0.977007108 1.040045754 1 13.54084586 -6.624420977 0.571398272 1.019883934 0.817170636 0.908361454 0.021295263 0.249926879 0.177344737 0.017276538 0.023382396 2.37E-07 6.624420977 -0.202713298 VTSSMSS(ph)PSMQPK ddPTM_A459_MK2206_30min_R2 2 VTSSMSSPSMQPK 13 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VT(0.002)S(0.01)S(0.048)MS(0.176)S(0.567)PS(0.197)MQPK;VTSSMS(0.447)S(0.533)PS(0.02)MQPK 148.89 0.0041065 9461200 54541 63029 63978 79169 62615 60509 74413 49378 60700 71578 TRUE FALSE 58716.70089 59899.07151 66110.99459 72700.63945 60156.42048 62811.7124 64642.48371 55831.87414 65979.57628 69242.41572 0.84798747 0.865063284 0.954775969 1.049943719 0.868779921 0.907127687 0.933567713 0.806324759 0.952878024 1 16.07936844 -12.53492903 1.326449545 2.977012545 0.910143861 0.148055177 0.065041999 1027290.95 19373.67433 6113930.65 0.020109458 2.92E-13 12.53492903 -2.066868684 VTSSMSSPS(ph)MQPK ddPTM_A459_MK2206_30min_R2 1 VTSSMSSPSMQPK 13 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VTS(0.001)S(0.014)MS(0.108)S(0.323)PS(0.553)MQPK 100.19 0.028348 2522900 20672 22836 24013 24929 25002 21038 25208 23477 23938 25556 TRUE FALSE 22254.66421 21701.99745 24813.58143 22892.22096 24020.29586 21838.61583 21898.15932 26545.52451 26020.08397 24722.10981 0.900192758 0.877837596 1.003699993 0.925981687 0.971611891 0.883363758 0.88577227 1.073756435 1.052502564 1 14.59351425 -7.764586412 24.99999632 1.047347148 0.923379796 0.637555961 0.041686421 52.62331836 418024.0603 0.022288608 0.011413646 1.72E-08 7.764586412 -0.123967352 VTSSVPLPS(ph)GSTSSPGR ddPTM_A459_MK2206_30min_R1 1 VTSSVPLPSGSTSSPGR 17 0 Q15036-2;Q15036 Q15036-2 SNX17 Sorting nexin-17 1 VTSSVPLPS(0.555)GS(0.256)T(0.034)S(0.034)S(0.121)PGR 146.1 0.00044532 12213000 6115.4 6443.3 6667.3 6114.7 6153.9 6414 5712.7 5241.9 5364.4 4634.8 TRUE FALSE 5595.253117 6023.839999 6214.742252 6585.655253 5908.777132 6777.155137 5331.616206 5196.070621 5922.048577 5208.994015 1.074152341 1.156430586 1.193079169 1.264285433 1.134341317 1.301048747 1.023540475 0.997519023 1.136889111 1 12.34678906 -7.289247383 24.95173479 1.039280376 1.187188611 0.519131568 0.069657029 597.5294608 536152.1381 0.028842617 0.019450435 5.14E-08 7.289247383 0.147908235 VTSSVPLPSGSTSS(ph)PGR ddPTM_A459_MK2206_30min_R1 5 VTSSVPLPSGSTSSPGR 17 0 Q15036-2;Q15036 Q15036-2 SNX17 Sorting nexin-17 1 VTSSVPLPSGS(0.001)T(0.007)S(0.034)S(0.958)PGR;VTSSVPLPSGSTS(0.052)S(0.948)PGR;VTSSVPLPS(0.01)GS(0.034)T(0.034)S(0.193)S(0.73)PGR;VTSSVPLPSGSTS(0.004)S(0.996)PGR;VTSSVPLPSGS(0.001)T(0.006)S(0.03)S(0.963)PGR 289.5 1.05E-75 328965000 26917.8 25037.3 26618.5 22821.3 26140.2 25767.4 26226.6 22042.3 22472.3 19418.9 TRUE FALSE 24628.29976 23407.36722 24811.71038 24579.00048 25098.98048 27226.32792 24477.07137 21849.5865 24808.376 21824.65994 1.128462016 1.072519218 1.136865841 1.126203137 1.150028479 1.247502962 1.121532772 1.001142128 1.136713061 1 14.41367155 -7.592983558 7.767007209 1.052680524 1.143230173 0.396358584 0.053823732 0.275727844 26.38527468 0.026073754 0.014982276 2.55E-08 7.592983558 0.090549648 VTSSVPLPSGSTSS(ph)PGR ddPTM_A459_MK2206_30min_R2 4 VTSSVPLPSGSTSSPGR 17 0 Q15036-2;Q15036 Q15036-2 SNX17 Sorting nexin-17 1 VTSSVPLPSGSTS(0.137)S(0.863)PGR;VTSSVPLPSGSTS(0.007)S(0.993)PGR;VTSSVPLPSGSTS(0.014)S(0.986)PGR;VTSSVPLPSGSTS(0.026)S(0.974)PGR 300.2 3.81E-89 494671000 304218 335399 295081 387253 329775 334604 353877 309695 283238 297467 TRUE FALSE 327509.164 318743.5734 304918.8533 355613.1911 316826.3765 347337.5897 307412.5248 350173.1998 307873.5293 287760.6762 1.138130367 1.107668976 1.059626553 1.235794953 1.101006506 1.207036327 1.068292336 1.216890384 1.069894377 1 18.13450993 -8.522907922 24.56707233 0.999999998 1.139673428 0.379796315 0.058106906 2.034040273 1713030.185 0.052308469 0.013505989 3.00E-09 8.522907922 0.13967343 VTTEIQLPS(ph)QSPVEEQSPASLSSLR ddPTM_A459_MK2206_30min_R2 1 VTTEIQLPSQSPVEEQSPASLSSLR 25 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 VTTEIQLPS(0.866)QS(0.133)PVEEQSPASLSSLR 89.622 3.71E-05 6297700 38052 50729 41116 48002 49921 52204 44772 38547 44216 40831 TRUE FALSE 40965.29038 48209.87163 42486.78692 44080.08305 47960.85071 54190.6598 38893.38262 43585.22525 48061.82776 39498.68781 1.037130412 1.220543625 1.075650592 1.115988543 1.214239089 1.371961014 0.984675309 1.103460081 1.216795555 1 15.26951711 -10.9149187 6.267617692 0.999976757 1.150230909 0.151466172 0.105715973 3.45E-05 3.35E-06 0.102823649 0.024934543 1.22E-11 10.9149187 0.150254153 VTTEIQLPSQS(ph)PVEEQSPASLSSLR ddPTM_A459_MK2206_30min_R1 4 VTTEIQLPSQSPVEEQSPASLSSLR 25 0 E9PMS6;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 VTTEIQLPS(0.015)QS(0.985)PVEEQSPASLSSLR;VTT(0.001)EIQLPS(0.251)QS(0.748)PVEEQSPASLSSLR;VTTEIQLPS(0.248)QS(0.752)PVEEQSPASLSSLR;VTTEIQLPSQS(1)PVEEQSPASLSSLR 190.8 6.99E-27 72875300 17665.6 17542.7 17325.9 14661.4 19704.1 17442.8 17859.2 17318.5 14580 14042.9 TRUE FALSE 16163.04795 16400.66704 16149.86618 15790.62357 18919.24397 18430.39626 16667.84535 17167.08618 16095.64318 15782.64047 1.024102905 1.03915863 1.023267698 1.000505815 1.198737563 1.167763803 1.056087249 1.087719524 1.019832087 1 13.94605097 VTTHPLAK ddPTM_A459_MK2206_30min_R1 1 VTTHPLAK 8 0 Q99497;K7ELW0;K7EN27 Q99497 PARK7 Protein deglycase DJ-1 0 96.492 0.029554 4891700 10542 10885 10276 10291 8872.4 8569 11223 10754 2206.9 7207.8 FALSE TRUE 9645.347542 10176.38452 9578.493751 11083.6146 8518.99352 9054.169375 10474.33415 10659.97891 2436.315152 8100.75668 1.190672418 1.256226415 1.182419634 1.368219666 1.051629355 1.117694276 1.293006883 1.315923849 0.300751553 1 12.98384096 -8.244804421 24.9996182 0.65037574 1.219885809 0.617802466 0.179827243 417.215188 627008.6472 0.112800488 0.042374883 5.69E-09 8.244804421 0.569510069 VTVDTGVIPASEEKAET(ph)PTAAEDDNEGDKK ddPTM_A459_MK2206_30min_R1 1 VTVDTGVIPASEEKAETPTAAEDDNEGDKK 30 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 VTVDTGVIPAS(0.061)EEKAET(0.565)PT(0.374)AAEDDNEGDKK 60.172 0.0034602 6207400 1162 1781.7 1413.9 1745.5 774.82 406.69 1012.7 919.34 1403 1557 TRUE FALSE 1063.165798 1665.711006 1317.928407 1879.938712 743.9572787 429.7164363 945.1446308 911.3023073 1548.846871 1749.892915 0.607560491 0.951893108 0.753148033 1.074316432 0.42514446 0.245567276 0.540115697 0.520776043 0.885109516 1 10.77305092 -6.273155024 24.97619389 0.557829902 0.847556818 0.192495378 0.234146066 1025.258017 2185708.929 0.071924591 0.08221207 5.33E-07 6.273155024 0.289726917 VTVEST(ph)PDLEK ddPTM_A459_MK2206_30min_R2 1 VTVESTPDLEK 11 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 VTVES(0.035)T(0.965)PDLEK 176.32 0.00016617 3896200 51154 37295 32886 34503 32985 26874 38548 35232 26432 43482 TRUE FALSE 55070.38957 35442.98453 33982.40283 31683.99453 31689.84316 27896.7089 33486.6013 39836.94337 28731.00758 42063.1859 1.309230112 0.842612935 0.807889419 0.753247617 0.753386661 0.663209605 0.796102354 0.947073849 0.68304402 1 15.3602705 -4.754269789 3.873494046 0.791623489 1.375424312 0.698431076 0.099561475 0.146616827 3.893099671 0.024251776 0.253500966 1.76E-05 4.754269789 0.583800823 VTWDGHS(ph)GSMAR ddPTM_A459_MK2206_30min_R1 1 VTWDGHSGSMAR 12 0 Q15459;Q15459-2 Q15459 SF3A1 Splicing factor 3A subunit 1 1 VT(0.008)WDGHS(0.992)GSMAR 101.25 0.012701 40799000 2966.8 2868.6 2632.9 2235.5 3033.2 2226.8 2913.5 2316 2548.8 2254.1 TRUE FALSE 2714.458081 2681.853619 2454.186084 2407.678597 2912.381221 2352.879492 2719.145731 2295.751456 2813.756881 2533.354926 1.071487478 1.058617406 0.968749408 0.950391346 1.149614368 0.928760304 1.073337851 0.906209956 1.110684039 1 11.3068335 VVASGPGLEHGK ddPTM_A459_MK2206_30min_R2 1 VVASGPGLEHGK 12 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 0 163.45 0.00070376 9681100 31832 46535 39711 49986 46205 45622 52206 36345 40811 41659 FALSE TRUE 34269.08239 44224.13957 41034.94492 45901.9839 44390.75954 47358.17718 45351.28949 41095.41629 44360.66701 40299.67024 0.850356397 1.09738217 1.018245179 1.139016365 1.101516694 1.175150489 1.125351379 1.019745721 1.100769975 1 15.29848041 -4.760508733 24.93828745 1.090955006 0.850356106 0.628930217 0.054278332 14.35685528 384504.3414 0.013559854 0.079974622 1.74E-05 4.760508733 -0.2405989 VVDFGSATYDDEHHSTLVS(ph)TR ddPTM_A459_MK2206_30min_R1 1 VVDFGSATYDDEHHSTLVSTR 21 0 F8WBF5;P49759;P49759-3;A0A087WVK0;B8ZZR0;Q9HAZ1 F8WBF5;Q9HAZ1 CLK1;CLK4 Dual specificity protein kinase CLK1;Dual specificity protein kinase CLK4 1 VVDFGSATYDDEHHS(0.001)T(0.029)LVS(0.725)T(0.246)R 98.973 0.00020781 3982300 1346.3 1218.7 1514.8 1534.3 1195.6 1120.2 1175.8 1135.6 709.91 726.93 TRUE FALSE 1231.790115 1139.362408 1411.979596 1652.472052 1147.97672 1183.624756 1097.364527 1125.671569 783.7076849 816.9875764 1.507721966 1.394589638 1.728275481 2.022640367 1.405133632 1.448767142 1.343183861 1.37783193 0.959265119 1 9.67417033 -7.778024021 0.852757457 0.972509167 1.625543787 0.622369447 0.180623771 0.433741709 0.584489592 0.176412517 0.076363978 1.67E-08 7.778024021 0.65303462 VVDLMAHMASK ddPTM_A459_MK2206_30min_R1 2 VVDLMAHMASK 11 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 164.81 0.00092188 39911000 22057 19974.7 19169.3 17157.1 19404.4 20953 23938 18817.1 19420.3 19494.8 FALSE TRUE 20180.93632 18674.3434 17868.14132 18478.54281 18631.48166 22139.34075 22341.1397 18652.58408 21439.10968 21909.963 0.921084911 0.852321996 0.815525856 0.843385396 0.850365729 1.010469107 1.019679481 0.851328872 0.978509625 1 14.41929943 -6.747839875 24.98671833 0.965685598 0.853293577 0.56495769 0.050467869 187.1942823 343936.1794 0.017345684 0.017254183 1.79E-07 6.747839875 -0.112392021 VVDLMAHMASK ddPTM_A459_MK2206_30min_R2 1 VVDLMAHMASK 11 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 107.97 0.01439 5977000 68713 70441 73960 77448 74967 71374 80961 74199 72851 73264 FALSE TRUE 73973.72011 66943.00237 76425.78949 71120.25066 72023.4189 74090.18758 70330.72345 83897.06406 79187.4483 70873.40168 1.043744456 0.94454338 1.078342335 1.003482957 1.016226358 1.045387774 0.992342992 1.183759522 1.117308418 1 16.11295667 -7.743360844 24.99948258 1.112900509 1.017699743 0.322666437 0.053952348 222.2878045 307386.2433 0.023913498 0.013771536 1.81E-08 7.743360844 -0.095200766 VVDLMAHMASKE ddPTM_A459_MK2206_30min_R1 2 VVDLMAHMASKE 12 1 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 131.69 0.0026918 98143000 31943 30574 33985 33397 39458 32367 32638 36678 21376 16317.4 FALSE TRUE 29226.08011 28583.62704 31678.19289 35969.24273 37886.30431 34199.59157 30460.77857 36357.32811 23598.11169 18338.9227 1.593663956 1.558631742 1.727374797 1.961360725 2.06589585 1.864863718 1.660990619 1.982522567 1.286777423 1 14.16262127 -8.449518957 3.999026403 1.004850336 1.801216288 0.734062902 0.162637253 0.110263887 3.289389579 0.172797137 0.045370817 3.55E-09 8.449518957 0.796365951 VVDLMAHMASKE ddPTM_A459_MK2206_30min_R2 2 VVDLMAHMASKE 12 1 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 136.93 0.0018482 12176100 93881 206992 159003 202634 250750 230730 198976 156964 216120 162147 FALSE TRUE 101068.6015 196713.0783 164304.0807 186078.154 240904.2951 239510.5918 172850.2122 177479.7337 234917.7269 156856.1567 0.644339398 1.254098548 1.04748251 1.186298058 1.535829388 1.526944156 1.101966387 1.131480826 1.497663413 1 17.25908263 -4.495198109 1.716926302 1.275867011 4.02E-33 0.46152768 0.19375436 2.145924201 3.382990866 0.054576871 5.707141944 3.20E-05 4.495198109 -1.275867011 VVDNS(ph)PPPALPPK ddPTM_A459_MK2206_30min_R1 2 VVDNSPPPALPPK 13 0 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 VVDNS(1)PPPALPPK;VVDNS(1)PPPALPPK 119.96 0.0031269 14850100 7742.8 7454.2 7752.4 6880.9 8070 7042.8 7751.1 6956.8 6409.8 5219.4 TRUE FALSE 7084.234201 6968.930225 7226.188687 7410.86811 7748.554811 7441.55725 7234.038262 6895.977431 7076.121648 5866.018676 1.207673312 1.188017054 1.231872772 1.263355696 1.320922288 1.268587378 1.233210915 1.175580545 1.206290337 1 12.51816595 -9.048605192 0.843998871 0.998876032 1.245342413 0.780224962 0.037907869 0.921990143 1.007806399 0.044810535 0.014377359 8.94E-10 9.048605192 0.246466381 VVDNS(ph)PPPALPPK ddPTM_A459_MK2206_30min_R2 3 VVDNSPPPALPPK 13 0 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 VVDNS(1)PPPALPPK;VVDNS(1)PPPALPPK;VVDNS(1)PPPALPPK 93.237 0.017384 16432800 143615 181044 154749 168865 181747 172629 188502 139091 149061 181089 TRUE FALSE 154610.2748 172053.6182 159908.2544 155068.1893 174610.6996 179198.5176 163751.461 157270.6713 162026.0563 175180.0808 0.882579082 0.982152865 0.91282213 0.885193046 0.996749738 1.022938891 0.934760735 0.89776572 0.924911415 1 17.41847921 -6.259327731 24.96283379 0.959342241 0.920229742 0.212451974 0.043832406 393.3043072 4649444.874 0.014346381 0.017640704 5.50E-07 6.259327731 -0.039112499 VVDRDSEEAEIIR ddPTM_A459_MK2206_30min_R1 3 VVDRDSEEAEIIR 13 1 P09874 P09874 PARP1 Poly [ADP-ribose] polymerase 1 0 ;; 143.76 0.0019882 12012900 5357.8 6034.7 4760.2 4043.51 6236.3 5456.9 6253.3 4854.6 5611.3 4025.7 FALSE TRUE 4902.090975 5641.839933 4437.090887 4354.941841 5987.894965 5765.864962 5836.153767 4812.156744 6194.614715 4524.434108 1.08347052 1.2469714 0.980695216 0.96253846 1.323457215 1.274383674 1.289919054 1.063593066 1.369146852 1 12.14352164 -6.265592021 24.99178774 1.229469766 1.074906673 0.247903164 0.128595568 511.7637275 3079940.106 0.038922751 0.045759899 5.43E-07 6.265592021 -0.154563093 VVDRDSEEAEIIR ddPTM_A459_MK2206_30min_R2 2 VVDRDSEEAEIIR 13 1 P09874 P09874 PARP1 Poly [ADP-ribose] polymerase 1 0 ; 113.07 0.01323 8990900 214372 204120 210892 166963 169989 112732 231383 168905 134117 233255 FALSE TRUE 230784.4851 193983.6976 217923.034 153321.5888 163314.3777 117022.0953 201002.1342 190981.4634 145782.2542 225643.9085 1.02278181 0.859689495 0.965782925 0.679484724 0.723770382 0.518614024 0.890793532 0.846384309 0.646072191 1 17.78368831 -5.754052122 24.99262182 0.745621652 0.940445267 0.300699558 0.132730288 206.6519596 699138.3382 0.035728214 0.060341504 1.76E-06 5.754052122 0.194823614 VVDVEEQQLEES(ph)GPHDLTETSYLPR ddPTM_A459_MK2206_30min_R1 2 VVDVEEQQLEESGPHDLTETSYLPR 25 0 P38398-8;P38398-4;P38398;P38398-7;H0Y8B8;B7ZA85;E7EUM2;A0A2R8Y7V5;P38398-6;P38398-5;P38398-3;K7EPC7 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 VVDVEEQQLEES(0.998)GPHDLT(0.002)ETS(0.001)YLPR;VVDVEEQQLEES(1)GPHDLTETSYLPR 146.28 6.72E-10 24417000 1866.04 1728.36 1645.21 1349.47 2218.12 1639.24 1772.34 1835.74 1447.38 1490.89 TRUE FALSE 1707.323499 1615.84345 1533.537729 1453.406413 2129.767583 1732.052352 1654.110432 1819.690319 1597.840331 1675.592709 1.018937054 0.964341419 0.915221056 0.867398387 1.271053265 1.033695326 0.987179297 1.085997993 0.95359709 1 10.7104558 VVDVEEQQLEES(ph)GPHDLTETSYLPR ddPTM_A459_MK2206_30min_R2 2 VVDVEEQQLEESGPHDLTETSYLPR 25 0 P38398-8;P38398-4;P38398;P38398-7;H0Y8B8;B7ZA85;E7EUM2;A0A2R8Y7V5;P38398-6;P38398-5;P38398-3;K7EPC7 P38398-8 BRCA1 Breast cancer type 1 susceptibility protein 1 VVDVEEQQLEES(0.999)GPHDLT(0.001)ETSYLPR;VVDVEEQQLEES(1)GPHDLTETSYLPR 124.13 5.08E-08 8463100 24079 27434.5 19798.3 30068.7 31068.8 29973.8 29168.9 19767.6 26754.4 25325.5 TRUE FALSE 25922.50675 26072.14262 20458.36544 27611.99102 29848.8828 31114.47396 25338.98839 22351.29319 29081.44935 24499.13101 1.05809903 1.064206833 0.835064943 1.127060018 1.218364961 1.270023576 1.034281109 0.912330041 1.187040036 1 14.58044296 VVDYS(ph)QFQESDDADEDYGRDSGPPTK ddPTM_A459_MK2206_30min_R2 1 VVDYSQFQESDDADEDYGRDSGPPTK 26 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDY(0.042)S(0.589)QFQES(0.369)DDADEDY(0.001)GRDSGPPTK 77.917 9.26E-05 40130000 28307 71012 52953 77222 82437 70022 70452 48926 74158 49135 TRUE FALSE 30474.20568 67485.64734 54718.42659 70912.71558 79200.10917 72686.73628 61201.56777 55320.79619 80608.12879 47531.72897 0.641133961 1.419802073 1.1511979 1.491902717 1.666257695 1.52922559 1.287593973 1.1638709 1.695880426 1 15.53660326 -4.7600966 24.99074347 1.390851372 0.641133052 0.508528696 0.217133406 27.48829187 511398.2639 0.053215637 0.322765863 1.74E-05 4.7600966 -0.74971832 VVDYSQFQES(ph)DDADEDYGR ddPTM_A459_MK2206_30min_R1 10 VVDYSQFQESDDADEDYGR 19 0 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYS(0.002)QFQES(0.998)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR 303.05 1.82E-100 414685900 40345.97 40855.42 41014.24 30636.43 40278.6 38127.61 45872.15 34873.07 38134.19 41707.49 TRUE FALSE 36914.33339 38195.72473 38230.30766 32996.05315 38674.21807 40286.36233 42812.10257 34568.17843 42098.37552 46874.52874 0.787513696 0.81485032 0.815588096 0.703922877 0.82505828 0.859451037 0.913334037 0.737461887 0.898107707 1 15.51651657 -6.582474079 4.228649886 0.866559227 0.783216173 0.31782481 0.067993579 0.308785676 11.30009486 0.022406704 0.022719969 2.62E-07 6.582474079 -0.083343054 VVDYSQFQES(ph)DDADEDYGR ddPTM_A459_MK2206_30min_R2 14 VVDYSQFQESDDADEDYGR 19 0 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR 266.99 1.68E-58 459577200 775214.3 870466 796262.5 892117.7 837366.7 900137.6 827634.8 712148.7 726059 819749.5 TRUE FALSE 834565.3028 827239.9242 822809.4943 819228.8302 804487.4759 934392.9671 718965.3566 805228.9803 789210.2994 793001.1409 1.052413748 1.043176209 1.037589294 1.033073962 1.014484639 1.17829965 0.906638489 1.0154197 0.995219627 1 19.59696342 -7.289467168 24.99929528 0.980604451 1.054792619 0.380638448 0.050059812 859.3356962 766478.4313 0.020484303 0.013813939 5.13E-08 7.289467168 0.074188168 VVDYSQFQES(ph)DDADEDYGRDSGPPTK ddPTM_A459_MK2206_30min_R1 3 VVDYSQFQESDDADEDYGRDSGPPTK 26 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDYSQFQES(0.999)DDADEDYGRDSGPPTK;VVDY(0.001)S(0.023)QFQES(0.977)DDADEDYGRDSGPPTK;VVDYS(0.001)QFQES(0.999)DDADEDYGRDSGPPTK 120.33 4.25E-09 68441000 8471.11 8419.18 8915.02 8537.4 10642 8912.2 7723.28 9295.41 5945.24 4233.74 TRUE FALSE 7750.597611 7871.089852 8309.893281 9194.952027 10218.10661 9416.801062 7208.074083 9214.14121 6563.268973 4758.247674 1.628876457 1.654199275 1.746418818 1.932424005 2.147451605 1.979048109 1.514858952 1.936456831 1.379345806 1 12.21621465 -8.496577086 3.173673245 1.001627876 1.819446976 0.681265361 0.180640442 0.135561592 3.213438079 0.188056634 0.050018577 3.19E-09 8.496577086 0.8178191 VVDYSQFQES(ph)DDADEDYGRDSGPPTK ddPTM_A459_MK2206_30min_R2 2 VVDYSQFQESDDADEDYGRDSGPPTK 26 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDY(0.001)S(0.002)QFQES(0.997)DDADEDYGRDSGPPTK;VVDYS(0.001)QFQES(0.998)DDADEDY(0.001)GRDSGPPTK 102.92 4.17E-07 47765100 68876 151638 116349 145364 173596 131149 128367 96825 146540 101417 TRUE FALSE 74149.19952 144107.8774 120228.0176 133487.2962 166779.7488 136139.9671 111512.2587 109480.3599 159285.7843 98107.7716 0.755793331 1.46887321 1.225468845 1.360618981 1.699964703 1.387657317 1.136630227 1.115919342 1.623579679 1 16.5820798 -4.753888414 24.99675435 1.343199891 0.755792286 0.401480775 0.212118356 279.4293314 924947.8834 0.052646759 0.541504281 1.76E-05 4.753888414 -0.587407606 VVDYSQFQESDDADEDY(ph)GRDSGPPTK ddPTM_A459_MK2206_30min_R2 1 VVDYSQFQESDDADEDYGRDSGPPTK 26 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDYS(0.009)QFQES(0.352)DDADEDY(0.625)GRDS(0.014)GPPTK 106.58 2.92E-07 7222700 14039 31582 24611 29393 28193 22313 24355 18953 24729 18805 TRUE FALSE 15113.83663 30013.6838 25431.51846 26991.49788 27086.00116 23162.13685 21157.15924 21430.22218 26879.88372 18191.39439 0.830823427 1.64988363 1.397997202 1.483750904 1.488945849 1.273246919 1.1630312 1.178041755 1.477615357 1 14.15096851 -6.950771756 7.173737055 1.219209453 1.393175157 0.100390421 0.227869568 0.475764599 56.02811454 0.077851199 0.06837296 1.12E-07 6.950771756 0.173965704 VVEHNIR ddPTM_A459_MK2206_30min_R1 1 VVEHNIR 7 0 O00232-2;O00232 O00232-2 PSMD12 26S proteasome non-ATPase regulatory subunit 12 0 94.662 0.034128 893880 1181.9 908.57 781.91 1022.8 586.03 847.36 1117.6 1084.9 123.95 672.03 FALSE TRUE 1081.373199 849.4219279 728.8361277 1101.576233 562.6871842 895.3367909 1043.046943 1075.414834 136.8350461 755.28615 1.431739743 1.124635912 0.964980131 1.458488592 0.744998679 1.18542726 1.380995724 1.423850859 0.181169807 1 9.560879522 -8.250502854 24.99136619 0.590584864 1.20016257 0.434948406 0.284032643 574.5871797 1313013.184 0.187970892 0.069515863 5.62E-09 8.250502854 0.609577706 VVEHNIR ddPTM_A459_MK2206_30min_R2 2 VVEHNIR 7 0 O00232-2;O00232 O00232-2 PSMD12 26S proteasome non-ATPase regulatory subunit 12 0 ; 135.87 0.0039188 2906200 19855.2 22527.9 19543.9 21531.7 21086.1 18676.3 21830 18281.5 16697.8 23112 FALSE TRUE 21375.32938 21409.19724 20195.48387 19772.49123 20258.15376 19387.03968 18963.69478 20670.95482 18150.14446 22357.85733 0.956054467 0.957569275 0.903283511 0.884364317 0.906086548 0.867124224 0.848189274 0.924549903 0.811801605 1 14.44849431 -5.346112903 2.954690278 0.88648869 0.958852652 0.223152968 0.047092156 0.335904235 5.618727047 0.011868234 0.031019277 4.51E-06 5.346112903 0.072363962 VVELRPPS(ph)R ddPTM_A459_MK2206_30min_R2 1 VVELRPPSR 9 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 VVELRPPS(1)R 66.267 0.047163 38351000 26560 28489 24082 31271 25583 29306 29863 18318 25193 26451 TRUE FALSE 28593.45402 27074.27769 24884.88186 28716.05927 24578.48288 30421.26037 25941.95223 20712.2255 27384.2416 25587.90604 1.117459709 1.058088835 0.972525138 1.12225124 0.960550771 1.18889214 1.013836466 0.809453711 1.070202523 1 14.64317447 -7.527503762 24.99921273 0.94622588 1.065643676 0.234969833 0.088216012 169.8600494 918108.9984 0.038688208 0.02244121 2.97E-08 7.527503762 0.119417795 VVESPDFS(ph)KDEDYLGK ddPTM_A459_MK2206_30min_R1 1 VVESPDFSKDEDYLGK 16 1 Q9Y6Y8 Q9Y6Y8 SEC23IP SEC23-interacting protein 1 VVES(0.34)PDFS(0.659)KDEDYLGK 74.853 0.017468 14688000 3988.4 4243.3 4191.1 3424.4 3241.9 2853.8 3735.4 3618 5037.4 4123.9 TRUE FALSE 3649.165636 3967.060399 3906.619809 3688.147881 3112.768258 3015.37969 3486.218282 3586.368207 5561.055757 4634.799866 0.787340498 0.855929169 0.842888565 0.79575127 0.671607912 0.650595447 0.752183133 0.773791385 1.199848088 1 12.17829133 -8.249472819 24.39451441 1.099924028 0.765307234 0.755017923 0.076023497 237.4684806 484096.2873 0.056686721 0.021032602 5.63E-09 8.249472819 -0.334616794 VVESPDFS(ph)KDEDYLGK ddPTM_A459_MK2206_30min_R2 2 VVESPDFSKDEDYLGK 16 1 Q9Y6Y8 Q9Y6Y8 SEC23IP SEC23-interacting protein 1 VVES(0.01)PDFS(0.989)KDEDY(0.001)LGK;VVES(0.116)PDFS(0.878)KDEDY(0.007)LGK 70.628 0.023141 22600300 57599 44339 52535 51735 49013 33647 63254 42872 37131 63789 TRUE FALSE 62008.82373 42137.18973 54286.49068 47508.08501 47088.50335 34927.46016 54948.67382 48475.5176 40360.58726 61707.57015 1.004881955 0.682852843 0.87973794 0.76989071 0.763091193 0.566015808 0.890468928 0.785568407 0.65406217 1 15.91315987 -4.747953646 24.9561147 0.76968241 1.004882544 0.245458611 0.119344529 917.9627561 1698641.098 0.028076569 0.541034497 1.79E-05 4.747953646 0.235200134 VVFPPGS(ph)PIPLR ddPTM_A459_MK2206_30min_R2 1 VVFPPGSPIPLR 12 0 A0A1B0GTU4;A0A1B0GV30 A0A1B0GTU4 1 VVFPPGS(1)PIPLR 92.781 0.021198 1619300 15122 12677 11537 14330 14114 11131 14952 10922 10655 14895 TRUE FALSE 16279.75195 12047.47861 11921.63782 13159.19316 13559.81344 11554.598 12988.78444 12349.5429 11581.75264 14408.97737 1.129833959 0.836109205 0.827375706 0.913263504 0.941067023 0.80190271 0.901436938 0.857072822 0.803787274 1 13.81468033 -4.756648621 24.99990486 0.871505126 1.129834351 0.611324135 0.060686286 94.33760157 492229.605 0.014417159 0.114534475 1.75E-05 4.756648621 0.258329225 VVFPPGS(ph)PIPLRR ddPTM_A459_MK2206_30min_R1 2 VVFPPGSPIPLRR 13 1 A0A1B0GTU4;A0A1B0GV30 A0A1B0GTU4 1 VVFPPGS(1)PIPLRR;VVFPPGS(1)PIPLRR 97.223 0.0069534 22920000 5487.1 5420.2 5454.7 5630.6 5991.5 4944 5369.3 5549.2 4552 4022.9 TRUE FALSE 5020.393331 5067.343995 5084.450162 6064.269788 5752.845868 5223.925007 5011.123794 5500.683929 5025.196689 4521.287223 1.110390268 1.120774626 1.124558098 1.341270636 1.272391154 1.15540658 1.108340069 1.216618998 1.111452655 1 12.14251786 -8.573031023 3.790369719 1.000092885 1.182084003 0.370864215 0.072890071 0.300235265 12.58666083 0.077082874 0.020245057 2.67E-09 8.573031023 0.181991118 VVFPPGS(ph)PIPLRR ddPTM_A459_MK2206_30min_R2 1 VVFPPGSPIPLRR 13 1 A0A1B0GTU4;A0A1B0GV30 A0A1B0GTU4 1 VVFPPGS(1)PIPLRR 71.344 0.029853 4840800 5934.3 6335.6 7402.2 7869.1 8458 6762.7 5012.5 5780.7 7768.3 6830.1 TRUE FALSE 6388.634571 6020.983317 7648.985654 7226.169358 8125.896422 7020.059287 4354.352729 6536.257338 8443.972692 6607.234396 0.966915079 0.911271336 1.157668276 1.093675345 1.229848365 1.062480739 0.659028039 0.989257675 1.277988972 1 12.68983081 -7.033759304 24.99508095 0.963542214 1.076654109 0.062518209 0.162268825 1676.788588 1241473.762 0.065205015 0.05054214 9.25E-08 7.033759304 0.113111895 VVGAQS(ph)LK ddPTM_A459_MK2206_30min_R2 1 VVGAQSLK 8 0 P52209-2;P52209;K7EM49;K7EMN2;K7EPF6 P52209-2 PGD "6-phosphogluconate dehydrogenase, decarboxylating" 1 VVGAQS(1)LK 80.916 0.044991 3906700 34994 43174 35874 39649 29090 30538 47497 38500 28218 35356 TRUE FALSE 37673.16755 41030.04194 37070.02126 36409.54987 27947.78043 31700.14499 41260.58685 43532.08219 30672.35063 34202.33662 1.101479351 1.199626868 1.0838447 1.06453399 0.817130734 0.9268415 1.206367486 1.272780941 0.896791087 1 15.06180727 -5.570406939 3.120201152 1.0325091 1.149966148 0.124352988 0.130793913 0.602859806 11.91581048 0.040257862 0.081318491 2.69E-06 5.570406939 0.117457048 VVGQT(ph)TPESFEK ddPTM_A459_MK2206_30min_R2 2 VVGQTTPESFEK 12 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VVGQT(0.755)T(0.233)PES(0.013)FEK;VVGQT(0.432)T(0.136)PES(0.432)FEK 205.87 2.56E-05 47341000 206003 229511 205678 209282 209526 189467 233466 189649 169126 218400 TRUE FALSE 221774.7481 218113.8175 212535.2019 192182.9911 201298.9565 196677.2995 202811.6338 214436.7755 183836.2738 211273.6259 1.049703895 1.032375984 1.005971289 0.909640237 0.95278791 0.93091269 0.959947712 1.014971815 0.870133567 1 17.68875316 -5.564746522 5.024655069 0.948978975 1.03672177 0.484757241 0.039270948 0.152306119 8.956580414 0.010322697 0.018804445 2.72E-06 5.564746522 0.087742795 VVGQTT(ph)PESFEK ddPTM_A459_MK2206_30min_R1 2 VVGQTTPESFEK 12 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VVGQT(0.068)T(0.912)PES(0.02)FEK;VVGQT(0.062)T(0.722)PES(0.215)FEK 253.06 2.74E-18 64738000 13255 12181 11577.7 10264.2 10309.9 9502.4 12392.7 9867.4 11813.7 10828.5 TRUE FALSE 12127.59265 11388.01469 10791.83798 11054.75046 9899.234851 10040.41768 11566.00559 9781.130362 13041.77639 12170.01633 0.996514081 0.935743583 0.886756245 0.908359542 0.813411797 0.825012671 0.950368946 0.80370725 1.07163179 1 13.57104348 -8.273737738 24.99392178 1.035815915 0.88930917 0.475466291 0.061265393 759.3703729 1543250.201 0.058199833 0.015462437 5.32E-09 8.273737738 -0.146506745 VVGQTT(ph)PESFEK ddPTM_A459_MK2206_30min_R2 1 VVGQTTPESFEK 12 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VVGQT(0.004)T(0.996)PESFEK 129.74 0.0052995 25713000 125220 124690 114970 122620 104300 90629 142070 99120 100790 129850 TRUE FALSE 134806.9395 118498.0759 118803.0424 112601.5538 100204.6579 94077.9501 123416.0383 112075.3243 109556.532 125613.0051 1.073192536 0.943358339 0.945786165 0.896416367 0.797725186 0.748950716 0.982510037 0.892227076 0.872175074 1 16.93862631 -4.550662744 1.081509398 0.877495302 1.244007599 0.370857577 0.07208066 2.857663801 1.985539373 0.02348144 1.352208287 2.81E-05 4.550662744 0.366512297 VVGVSDEAELHEMET(ph)EK ddPTM_A459_MK2206_30min_R1 1 VVGVSDEAELHEMETEK 17 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 VVGVSDEAELHEMET(1)EK 71.692 0.039474 9556400 1012.5 1202 1002.1 691.47 1001.9 944.87 1242.8 964.05 1255.5 1601.2 TRUE FALSE 926.3815582 1123.749582 934.080244 744.7271392 961.9922014 998.3677229 1159.89508 955.6214125 1386.013718 1799.568744 0.514779755 0.624454934 0.519057828 0.413836449 0.534568187 0.554781653 0.644540579 0.531028012 0.770192149 1 10.8134355 -8.625530648 1.083853671 1.003211877 0.531523708 0.846556931 0.061930048 0.242788589 0.605963805 0.061370931 0.019650125 2.37E-09 8.625530648 -0.471688169 VVHIMDFQR ddPTM_A459_MK2206_30min_R1 1 VVHIMDFQR 9 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991;B3KM87;P43243-2;H0Y8T4;D6RAM9;D6RAY2;D6RBI2;D6RE02;D6RIA2 D6REM6 MATR3 Matrin-3 0 105.52 0.019247 8200300 2272.4 2390.5 2444.4 2323.6 2662.1 2513.3 2314 2602.8 2143.2 1861.8 FALSE TRUE 2079.120447 2234.878016 2278.480938 2502.564075 2556.06292 2655.600874 2159.637282 2580.043994 2365.99331 2092.45384 0.993627868 1.068065624 1.0889038 1.195994878 1.221562393 1.269132357 1.032107491 1.233023135 1.130726645 1 11.03098008 -5.30280513 1.837713697 1.165733086 1.008491747 0.261654298 0.082806747 0.493644884 2.973897757 0.023101437 0.091780781 4.98E-06 5.30280513 -0.157241339 VVHIMDFQR ddPTM_A459_MK2206_30min_R2 1 VVHIMDFQR 9 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991;B3KM87;P43243-2;H0Y8T4;D6RAM9;D6RAY2;D6RBI2;D6RE02;D6RIA2 D6REM6 MATR3 Matrin-3 0 105.52 0.019247 2848800 11507 15673 14526 10934 13801 18234 11981 10550 14116 13656 FALSE TRUE 12387.98477 14894.70161 15010.28959 10040.65722 13259.1034 18927.90765 10407.88031 11928.92122 15343.78416 13210.40584 0.937744451 1.127497655 1.136247423 0.760056682 1.003686303 1.432802889 0.787854698 0.902994304 1.161492262 1 13.68938717 VVIGMDVAASEFFR ddPTM_A459_MK2206_30min_R1 2 VVIGMDVAASEFFR 14 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 261.75 9.07E-35 84738000 953.81 993.81 707.83 836.34 774.84 969.84 769.69 681.23 855.25 739.14 FALSE TRUE 872.6834508 929.1127884 659.7844717 900.7550517 743.976482 1024.751503 718.3453845 675.2740779 944.156298 830.7102434 1.050526893 1.118455919 0.794241406 1.084319182 0.895590837 1.233584768 0.864736399 0.812887626 1.136565133 1 9.698201534 VVKPKS(ph)PEPEATLTFPFLDK ddPTM_A459_MK2206_30min_R1 3 VVKPKSPEPEATLTFPFLDK 20 2 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 VVKPKS(0.992)PEPEAT(0.007)LT(0.001)FPFLDK;VVKPKS(0.998)PEPEAT(0.001)LTFPFLDK;VVKPKS(0.986)PEPEAT(0.01)LT(0.004)FPFLDK 70.094 0.004498 98652000 16833.9 19269.9 21040.4 20719.3 13785.8 11458.5 12146.4 16721 12365.8 6498.14 TRUE FALSE 15402.08841 18015.42601 19612.23627 22315.10408 13236.68239 12107.27037 11336.13582 16574.81006 13651.26916 7303.178642 2.10895682 2.46679246 2.685438387 3.0555331 1.812454966 1.657808327 1.552219434 2.269533702 1.869222955 1 12.83430881 -6.362597225 7.371260127 1.742659113 2.577071172 0.57858367 0.369136566 0.213032396 13.64548631 0.116164481 0.131741851 4.34E-07 6.362597225 0.834412059 VVKPKS(ph)PEPEATLTFPFLDK ddPTM_A459_MK2206_30min_R2 1 VVKPKSPEPEATLTFPFLDK 20 2 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 VVKPKS(0.997)PEPEAT(0.002)LT(0.001)FPFLDK 59.154 0.013028 7789400 17603 40142 33564 33616 43932 26631 38278 27656 32969 30748 TRUE FALSE 18950.69921 38148.60665 34683.00701 30869.46527 42207.00894 27644.46137 33252.05262 31270.73416 35836.58403 29744.69528 0.637111896 1.282534795 1.166023275 1.037814137 1.418976007 0.929391312 1.11791539 1.051304573 1.204805889 1 14.86034478 -4.750909682 24.99585565 1.135866273 0.637110853 0.545294711 0.136199732 335.0317299 795260.1824 0.032350954 0.452433243 1.77E-05 4.750909682 -0.49875542 VVKPKSPEPEAT(ph)LTFPFLDK ddPTM_A459_MK2206_30min_R2 1 VVKPKSPEPEATLTFPFLDK 20 2 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-6;Q9UPQ0;Q9UPQ0-2;H0Y8P3;G5EA03;Q9UPQ0-5;Q9UPQ0-3;Q9UPQ0-9;E7EPK0;Q9UPQ0-4;E9PDJ9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 VVKPKS(0.01)PEPEAT(0.79)LT(0.2)FPFLDK 60.062 0.039476 4304400 15421 45029 32862 28271 41211 22607 36519 25502 31060 27964 TRUE FALSE 16601.64362 42792.92534 33957.60268 25961.16887 39592.84907 23467.32523 31724.01143 28835.19896 33761.54266 27051.53697 0.613704265 1.58190366 1.255292914 0.959692933 1.463608116 0.867504322 1.172724916 1.065935699 1.248045266 1 14.72342294 -6.782946364 24.99995525 1.081330878 1.189972214 0.034626206 0.265817085 968.9249836 1126281.796 0.089489241 0.078994977 1.65E-07 6.782946364 0.108641336 VVLASAS(ph)PR ddPTM_A459_MK2206_30min_R1 2 VVLASASPR 9 0 O95671;O95671-2 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein 1 VVLASAS(1)PR;VVLAS(0.002)AS(0.998)PR 133.99 0.0029895 11696300 5116.8 4984.9 4831.3 4370.6 4997.3 4644.6 5148.9 5054.2 4326.5 3727.2 TRUE FALSE 4681.589291 4660.382104 4503.364817 4707.224369 4798.246959 4907.573238 4805.426276 5010.011662 4776.255158 4188.953675 1.117603501 1.112540855 1.075057202 1.123723186 1.145452381 1.171551089 1.147166249 1.196005507 1.14020243 1 12.03237421 -6.038434259 4.39560286 1.145344027 1.102171456 0.042000582 0.050516099 0.423904067 18.49368793 0.014126177 0.019437187 9.15E-07 6.038434259 -0.04317257 VVLASAS(ph)PR ddPTM_A459_MK2206_30min_R2 3 VVLASASPR 9 0 O95671;O95671-2 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein 1 VVLAS(0.01)AS(0.99)PR;VVLASAS(1)PR;VVLAS(0.004)AS(0.996)PR 114.86 0.0083508 20018400 78216 96147 96811 105906 94764 106171 96043 73836 86641 102110 TRUE FALSE 84204.2771 91372.47979 100038.6304 97253.14102 91043.08921 110211.4118 83432.43873 83486.61872 94176.87757 98778.15906 0.852458457 0.925027158 1.012760628 0.984561182 0.921692508 1.115746769 0.844644601 0.845193102 0.953418027 1 16.59190446 -9.954760157 9.277662231 1 0.941650978 0.047872259 0.080430114 0 0 0.080262437 0.0194665 1.11E-10 9.954760157 -0.058349022 VVLAYEPVWAIGTGK ddPTM_A459_MK2206_30min_R1 1 VVLAYEPVWAIGTGK 15 0 P60174;P60174-3;P60174-4;U3KPZ0;U3KQF3 P60174 TPI1 Triosephosphate isomerase 0 178.1 2.92E-08 0 4343.3 3847.2 4022.2 4418.4 5219.6 4796.2 5261.7 4241.3 2879.1 3005.7 FALSE TRUE 3973.879527 3596.746581 3749.18427 4758.705934 5011.692279 5067.756699 4910.701594 4204.218761 3178.392748 3378.068808 1.176376135 1.064734553 1.109860244 1.40870604 1.483596861 1.50019345 1.453700878 1.244562796 0.94089047 1 11.721983 -8.182991481 4.37989516 0.969625337 1.315433427 0.455261672 0.147599738 0.227192624 7.819814739 0.132580143 0.04511949 6.56E-09 8.182991481 0.345808089 VVLDDKDYFLFR ddPTM_A459_MK2206_30min_R1 2 VVLDDKDYFLFR 12 1 P61604;B8ZZ54 P61604 HSPE1 "10 kDa heat shock protein, mitochondrial" 0 ; 164.33 0.0012516 104736000 8354.5 8739.8 8137.9 8306.3 8299.9 8019.7 8697.6 8264.7 7198 6720.6 FALSE TRUE 7643.905904 8170.837431 7585.522021 8946.052665 7969.297408 8473.768484 8117.398974 8192.442599 7946.257858 7553.198666 1.012009116 1.081771815 1.004279426 1.184405847 1.055089077 1.121878142 1.074696871 1.084632215 1.052038773 1 12.88287202 -3.480171388 1.11466767 1.080937979 0.041704138 0.097668331 0.051327396 53.49556341 5.235500403 0.014721261 122.0584558 0.000331 3.480171388 -1.039233841 VVLGDGVQLPPGDYS(ph)TTPGGT(ph)LFSTTPGGTR ddPTM_A459_MK2206_30min_R2 1 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 31 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 VVLGDGVQLPPGDY(0.279)S(0.249)T(0.249)T(0.249)PGGT(0.529)LFS(0.121)T(0.121)T(0.16)PGGT(0.044)R 57.803 0.0086811 12673000 7944.6 11608 12355 14677 16101 18081 17808 12904 16278 18823 TRUE FALSE 8552.844684 11031.5636 12766.90953 13477.84215 15468.79384 18769.08512 15469.78821 14590.59711 17693.83102 18208.80705 0.469709227 0.605836701 0.701139262 0.7401826 0.84952264 1.03076962 0.849577249 0.801293411 0.971718299 1 14.15234879 -5.236311847 0.666160825 0.925428033 0.341865047 0.832141954 0.069499973 0.838620018 0.418804959 0.036282015 0.340187568 5.80E-06 5.236311847 -0.583562986 down VVLGDGVQLPPGDYSTT(ph)PGGT(ph)LFSTTPGGTR ddPTM_A459_MK2206_30min_R1 1 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 31 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 VVLGDGVQLPPGDY(0.545)S(0.135)T(0.074)T(0.29)PGGT(0.372)LFS(0.202)T(0.192)T(0.183)PGGT(0.007)R 80.56 5.50E-05 16467000 9313.5 9900.5 10474 8758.4 12443 12573 14293 12924 12894 12963 TRUE FALSE 8521.337918 9255.975651 9763.054062 9432.973486 11947.36896 13284.87239 13339.54005 12811.00683 14234.37744 14568.95431 0.584897017 0.635321895 0.670127303 0.647470868 0.820056725 0.911861765 0.915614104 0.879336057 0.977034943 1 13.83060971 -6.419351385 1.529282094 0.936162395 0.622718255 0.939061787 0.036386345 0.08891366 0.419254107 0.014050455 0.016856249 3.81E-07 6.419351385 -0.31344414 VVLGDGVQLPPGDYSTT(ph)PGGT(ph)LFSTTPGGTR ddPTM_A459_MK2206_30min_R2 1 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 31 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 VVLGDGVQLPPGDY(0.108)S(0.125)T(0.155)T(0.6)PGGT(0.299)LFS(0.274)T(0.154)T(0.231)PGGT(0.053)R 58.45 0.0096019 12034000 3739.9 3641.1 4267.1 6854.3 5842.9 8158.5 6987 4735 5018.3 6508 TRUE FALSE 4026.229619 3460.288269 4409.362984 6294.281764 5613.478388 8468.977434 6069.598507 5353.880758 5454.782663 6295.644493 0.639526203 0.549632094 0.700383096 0.999783544 0.891644754 1.345212145 0.964094862 0.850410274 0.86643753 1 12.62013836 -5.669183853 3.359806679 0.993809016 0.597925671 0.608924275 0.133051262 0.166205023 3.682843553 0.040104461 0.073684785 2.14E-06 5.669183853 -0.395883345 VVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTR ddPTM_A459_MK2206_30min_R1 3 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 31 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 VVLGDGVQLPPGDY(0.003)S(0.03)T(0.087)T(0.88)PGGT(0.001)LFS(0.266)T(0.227)T(0.495)PGGT(0.01)R;VVLGDGVQLPPGDYS(0.001)T(0.008)T(0.99)PGGT(0.01)LFS(0.369)T(0.194)T(0.41)PGGT(0.018)R;VVLGDGVQLPPGDYS(0.014)T(0.067)T(0.918)PGGT(0.001)LFS(0.045)T(0.287)T(0.66)PGGT(0.007)R 136.47 1.23E-17 116855000 22290.5 24252.4 23288.2 21239.9 29274.5 29745.4 34665.4 30668.3 30319.7 29484.2 TRUE FALSE 20394.57592 22673.56435 21707.46187 22875.80078 28108.43468 31429.55884 32352.93442 30400.17029 33471.54132 33136.92529 0.615463739 0.68423863 0.655083768 0.690341683 0.848251141 0.948475411 0.976340868 0.917410714 1.01009798 1 15.01615212 -6.415877917 1.74923756 0.970569903 0.651212618 0.964878421 0.027918344 0.058920698 0.359474179 0.010038807 0.011869674 3.84E-07 6.415877917 -0.319357284 VVLGDGVQLPPGDYSTT(ph)PGGTLFSTTPGGTR ddPTM_A459_MK2206_30min_R2 1 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 31 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 VVLGDGVQLPPGDY(0.01)S(0.011)T(0.028)T(0.232)PGGT(0.157)LFS(0.094)T(0.094)T(0.218)PGGT(0.157)R 65.059 0.0005394 3917900 38874 44245 38944 44718 44558 36866 43188 33776 33611 33034 TRUE FALSE 41850.22333 42047.85764 40242.37352 41064.39635 42808.42903 38268.96146 37517.36372 38190.63917 36534.42403 31956.10329 1.309615974 1.31580053 1.259301648 1.285025148 1.339601035 1.197547809 1.174028116 1.195096875 1.143269056 1 14.96380388 -8.29570121 0.36660009 0.981102289 1.325480994 0.887390187 0.032668797 0.433436077 0.174929267 0.055375711 0.036134172 5.06E-09 8.29570121 0.344378705 VVLIGGKPDR ddPTM_A459_MK2206_30min_R1 2 VVLIGGKPDR 10 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 119.68 0.015005 35881000 12429.4 13490 13240.5 11463.5 12645.2 11707.8 12415.6 12172.8 10882 10403.1 FALSE TRUE 11372.21426 12611.79855 12341.77175 12346.42076 12141.51491 12370.68552 11587.37798 12066.37449 12013.22284 11691.91457 0.972656291 1.078676933 1.055581759 1.055979385 1.038453954 1.058054731 0.99105907 1.032027255 1.027481237 1 13.51322357 -7.246876938 24.7629096 1.015310826 1.045768236 0.212330306 0.02843149 1118.774624 1902433.179 0.010532391 0.008130914 5.66E-08 7.246876938 0.03045741 VVLIGGKPDR ddPTM_A459_MK2206_30min_R2 1 VVLIGGKPDR 10 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 109.44 0.028374 13258000 99952 84370 81002 85374 83889 79377 95559 73215 72338 86124 FALSE TRUE 107604.402 80180.30849 83702.56625 78398.6711 80595.09635 82397.74736 83011.98851 82784.45188 78629.82848 83313.78093 1.29155586 0.962389506 1.004666519 0.94100484 0.967368129 0.989005017 0.996377641 0.993646561 0.94377938 1 16.34626753 -4.759741726 24.99996908 0.977711905 1.29155625 0.948738081 0.021894684 8.557241377 125977.968 0.005349547 0.033257927 1.74E-05 4.759741726 0.313844345 VVNANQNAS(ph)PNVPGK ddPTM_A459_MK2206_30min_R2 2 VVNANQNASPNVPGK 15 0 Q8IWI9;Q8IWI9-3;H3BP52;H3BTF4 Q8IWI9 MGA MAX gene-associated protein 1 VVNANQNAS(1)PNVPGK;VVNANQNAS(1)PNVPGK 192.78 3.03E-05 12616000 60990 55139 48325 55490 51587 43792 56676 49976 40478 58180 TRUE FALSE 65659.44129 52400.87744 49936.13138 50956.2895 49561.43518 45458.53525 49234.37312 56508.03479 43998.70327 56281.59136 1.166623752 0.931048255 0.887255143 0.905381107 0.880597616 0.807698115 0.874786443 1.004023401 0.781760114 1 15.7803755 -4.746458301 3.11606932 0.889612281 1.222774396 0.60124508 0.066486534 0.270627703 3.635666563 0.016143474 0.234215393 1.79E-05 4.746458301 0.333162115 VVNANQNAS(ph)PNVPGKR ddPTM_A459_MK2206_30min_R2 3 VVNANQNASPNVPGKR 16 1 Q8IWI9;Q8IWI9-3;H3BP52;H3BTF4 Q8IWI9 MGA MAX gene-associated protein 1 VVNANQNAS(1)PNVPGKR;VVNANQNAS(1)PNVPGKR;VVNANQNAS(1)PNVPGKR 65.924 0.027951 25013200 53968.5 55252 55433 52296 48191 47259 52777 46105.5 48517.1 57799 TRUE FALSE 58100.36985 52508.26602 57281.10855 48023.24951 46298.7792 49057.47436 45847.3165 52131.64715 52737.02966 55913.02336 1.039120519 0.939106184 1.024468095 0.858892019 0.828050004 0.877389048 0.819975629 0.932370386 0.943197604 1 15.77089674 -5.762625826 24.99993563 0.884892042 0.994719068 0.412036816 0.057472017 29.37374588 618966.4794 0.015879023 0.025119079 1.73E-06 5.762625826 0.109827026 VVNGAAASQPPS(ph)KR ddPTM_A459_MK2206_30min_R1 4 VVNGAAASQPPSKR 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VVNGAAAS(0.007)QPPS(0.993)KR;VVNGAAASQPPS(1)KR;VVNGAAAS(0.04)QPPS(0.96)KR;VVNGAAAS(0.001)QPPS(0.999)KR 120.99 0.0010193 34970400 9796.03 10107.94 9570.52 9490.39 10057.3 9728.05 11108 10991.21 9066.57 9570.37 TRUE FALSE 8962.826207 9449.911269 8920.899767 10221.34148 9656.696444 10278.84378 10367.00559 10895.11501 10009.0724 10756.01969 0.83328466 0.87856954 0.829386709 0.950290328 0.897794605 0.955636386 0.963832894 1.012931858 0.930555418 1 13.39285668 -6.112424084 0.616486129 0.985423463 0.827472879 0.718512899 0.032238743 0.534518874 0.402621678 0.020482377 0.048563133 7.72E-07 6.112424084 -0.157950584 VVNGAAASQPPS(ph)KR ddPTM_A459_MK2206_30min_R2 4 VVNGAAASQPPSKR 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VVNGAAASQPPS(1)KR;VVNGAAAS(0.003)QPPS(0.997)KR;VVNGAAASQPPS(1)KR;VVNGAAAS(0.007)QPPS(0.993)KR 92.671 0.0090849 46856900 103455.6 110161.1 98774.1 123677.2 110790 99504.9 106117.9 88500.2 108689.3 117683.5 TRUE FALSE 111376.2403 104690.66 102067.1792 113572.3771 106439.8279 103291.6287 92184.49226 100067.48 118142.8988 113843.497 0.978327644 0.919601582 0.896556956 0.997618486 0.934966254 0.907312507 0.809747545 0.878991621 1.037765897 1 16.79669236 -6.640153314 5.380416608 0.912097538 0.945002091 0 0.064810903 0.756544624 32.67617252 0.022221543 0.022142364 2.29E-07 6.640153314 0.032904553 VVNGGVPWPSPCPS(ph)PSSRPPSR ddPTM_A459_MK2206_30min_R1 1 VVNGGVPWPSPCPSPSSRPPSR 22 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 VVNGGVPWPSPCPS(0.31)PS(0.31)S(0.31)RPPS(0.07)R 109.18 2.89E-05 12707000 1469.3 1517.9 1893.1 1695.4 2134.3 1775.7 1596.3 1509.4 1766.6 1495.7 TRUE FALSE 1344.328319 1419.084434 1764.601646 1825.980002 2049.286312 1876.238599 1489.81374 1496.203475 1950.244392 1680.998608 0.799720067 0.84419132 1.049734151 1.086247183 1.219088643 1.116145243 0.886267087 0.890068241 1.160170141 1 10.71510281 -5.224151207 4.181564855 1.051527869 0.811800467 0.454147518 0.100815016 0.209348148 8.316253373 0.029095475 0.080933997 5.97E-06 5.224151207 -0.239727402 VVNGGVPWPSPCPS(ph)PSSRPPSR ddPTM_A459_MK2206_30min_R2 2 VVNGGVPWPSPCPSPSSRPPSR 22 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 VVNGGVPWPSPCPS(0.537)PS(0.355)S(0.064)RPPS(0.044)R;VVNGGVPWPS(0.001)PCPS(0.815)PS(0.079)S(0.079)RPPS(0.026)R 112.74 2.21E-05 14845400 33212 38625 38781 40599 32312 37240 37834 26845 30761 40910 TRUE FALSE 35754.73626 36706.93867 40073.93918 37281.93183 31043.26853 38657.1943 32866.35035 30353.73367 33436.53618 39575.11005 0.903465239 0.927525877 1.012604618 0.942055039 0.784413953 0.976805731 0.830480327 0.766990506 0.844888015 1 15.27230574 -6.10447113 9.468081077 0.859343904 0.951024107 0.209239688 0.074414413 0.541952056 45.41976255 0.021831694 0.028221303 7.86E-07 6.10447113 0.091680203 VVNGGVPWPSPCPSPSSRPPS(ph)R ddPTM_A459_MK2206_30min_R1 1 VVNGGVPWPSPCPSPSSRPPSR 22 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 VVNGGVPWPS(0.001)PCPS(0.323)PS(0.075)S(0.25)RPPS(0.351)R 84.674 0.000363 11062000 1138.5 1250.2 1140.5 1114 1517 1205.8 1252.2 1370.4 1381.2 814.72 TRUE FALSE 1041.664596 1168.811753 1063.086038 1199.800473 1456.574678 1274.071354 1168.668023 1358.418737 1524.780683 915.6536644 1.137618553 1.276477994 1.161013251 1.310321271 1.590748483 1.391433687 1.276321024 1.483550812 1.665237351 1 9.838658208 -6.000331557 7.656280524 1.421631075 1.205313142 0.219183295 0.174128538 0.170081009 78.9923238 0.048205913 0.068229881 9.99E-07 6.000331557 -0.216317933 VVNTDHGS(ph)PEQLQIPVTDSGR ddPTM_A459_MK2206_30min_R1 3 VVNTDHGSPEQLQIPVTDSGR 21 0 Q6IQ49-3;Q6IQ49-2;Q6IQ49 Q6IQ49-3 SDE2 Protein SDE2 homolog 1 VVNTDHGS(1)PEQLQIPVTDSGR;VVNTDHGS(1)PEQLQIPVTDSGR;VVNTDHGS(1)PEQLQIPVTDSGR 184.12 4.95E-15 97334000 9001.4 7648.1 8073.8 7340 9002.1 7813 8581.7 8067.4 6323.6 5863 TRUE FALSE 8235.783662 7150.2073 7525.772951 7905.328072 8643.527295 8255.365308 8009.230451 7996.867572 6980.960849 6589.352703 1.249862321 1.085115279 1.142111113 1.199712389 1.311741484 1.252834031 1.215480611 1.213604421 1.059430442 1 12.68592104 -8.375459264 3.277500863 1.002594354 1.207745311 0.605060848 0.058685248 0.179890546 3.4545457 0.062343674 0.016759043 4.21E-09 8.375459264 0.205150958 VVNTDHGS(ph)PEQLQIPVTDSGR ddPTM_A459_MK2206_30min_R2 2 VVNTDHGSPEQLQIPVTDSGR 21 0 Q6IQ49-3;Q6IQ49-2;Q6IQ49 Q6IQ49-3 SDE2 Protein SDE2 homolog 1 VVNT(0.003)DHGS(0.997)PEQLQIPVTDSGR;VVNTDHGS(1)PEQLQIPVTDSGR 144.83 2.84E-06 99226100 104460 103673 103605 123657 111661 121109 128452 97873 99331 107820 TRUE FALSE 112457.5379 98524.74957 107059.139 113553.8275 107276.6281 125717.8879 111586.0981 110665.3371 107970.6308 104301.8422 1.078193208 0.944611787 1.026435744 1.088703949 1.028520933 1.205327587 1.069838228 1.061010379 1.035174725 1 16.67040511 -4.436648317 22.91397108 1.055338588 3.240280427 0.01196351 0.064137573 5948.256531 1556966.769 0.016206518 10158.67345 3.66E-05 4.436648317 2.184941839 VVNVS(ph)SIMSVR ddPTM_A459_MK2206_30min_R2 1 VVNVSSIMSVR 11 0 P16152 P16152 CBR1 Carbonyl reductase [NADPH] 1 1 VVNVS(0.982)S(0.018)IMSVR 133.98 0.0017177 2813600 10912 18766 15524 18597 14239 13409 14158 10319 15959 17150 TRUE FALSE 11747.43111 17834.10773 16041.56241 17077.56561 13679.90531 13919.28889 12299.03759 11667.72873 17347.08497 16590.3969 0.708086201 1.074965706 0.966918544 1.0293645 0.824567694 0.838996738 0.741334741 0.703282073 1.045610004 1 14.01806078 -6.282073969 23.95586798 0.837249351 0.955706367 0.074697009 0.133529935 900.1497042 1045031.541 0.040347558 0.045809627 5.22E-07 6.282073969 0.118457017 VVPEDGS(ph)PEKR ddPTM_A459_MK2206_30min_R1 6 VVPEDGSPEKR 11 1 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR 210.44 3.39E-05 449598700 35688.9 41004 39580.7 35462.9 28492.1 25248.4 30152.6 29693 33240.8 29557.7 TRUE FALSE 32653.37165 38334.63215 36894.07236 38194.2587 27357.19932 26677.94259 28141.17507 29433.39723 36696.30011 33219.53103 0.982957033 1.153978728 1.110613884 1.149753098 0.82352756 0.803080049 0.847127404 0.886026874 1.10466039 1 15.01974409 -6.256852716 24.98743793 0.896475057 1.10403578 0.483084133 0.094833848 321.6973459 1752556.17 0.029125958 0.036349374 5.54E-07 6.256852716 0.207560723 VVPEDGS(ph)PEKR ddPTM_A459_MK2206_30min_R2 5 VVPEDGSPEKR 11 1 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR 152.38 0.0010403 226257000 303368 290557 292037 300483 288035 233263 331090 266420 222689 311461 TRUE FALSE 326594.0873 276128.3619 301773.3678 275932.5777 276725.2986 242139.9869 287617.4853 301242.0088 242058.0867 301298.0531 1.083956846 0.916462483 1.001577557 0.915812681 0.9184437 0.803655996 0.95459457 0.99981399 0.803384171 1 18.20083183 -1.52289645 0.968861634 0.915450718 127.5969471 0.31093475 0.069828516 1708.438151 2.683356128 0.02169439 480012.1603 0.029998777 1.52289645 126.6814964 VVPGQFDDADS(ph)SDSENR ddPTM_A459_MK2206_30min_R1 1 VVPGQFDDADSSDSENR 17 0 Q9BRS2;E9PFQ8 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 1 VVPGQFDDADS(0.576)S(0.424)DSENR 212.59 2.09E-09 18913000 3078.8 2935.4 2644.4 1939.3 2477.3 2861.1 3379.1 2230.5 3076 3230.8 TRUE FALSE 2816.931893 2744.304926 2464.905496 2088.665222 2378.623895 3023.093009 3153.686405 2210.998974 3395.761208 3631.055895 0.775788634 0.755787023 0.678839866 0.575222547 0.655077742 0.832565815 0.868531495 0.608913505 0.935199376 1 11.82617342 -6.767283733 24.82233089 0.825817251 0.685110932 0.345409579 0.108376984 175.4073019 744990.4177 0.037873549 0.034288873 1.71E-07 6.767283733 -0.140706319 VVPGQFDDADS(ph)SDSENRDLK ddPTM_A459_MK2206_30min_R2 2 VVPGQFDDADSSDSENRDLK 20 1 Q9BRS2;E9PFQ8 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 1 VVPGQFDDADS(0.569)S(0.431)DSENRDLK;VVPGQFDDADS(0.836)S(0.164)DSENRDLK 114.63 0.00015088 26152300 30791 42178 41611 43756 47702 42459 47300 35056 45562 41229 TRUE FALSE 33148.38263 40083.50185 42998.28997 40180.99483 45828.9798 44074.807 41089.45318 39637.93957 49524.9004 39883.70111 0.831126042 1.005009584 1.078091771 1.007454015 1.149065371 1.105083174 1.0302317 0.993838046 1.241732814 1 15.28351167 -4.285762222 1.26044431 1.078417796 0.331758887 0.508564608 0.07279967 3.456380916 2.024524255 0.02072248 4.542033099 5.18E-05 4.285762222 -0.746658909 VVPGQFDDADSS(ph)DSENR ddPTM_A459_MK2206_30min_R1 2 VVPGQFDDADSSDSENR 17 0 Q9BRS2;E9PFQ8 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 1 VVPGQFDDADS(0.021)S(0.979)DSENR;VVPGQFDDADS(0.069)S(0.93)DS(0.001)ENR 357.96 1.16E-197 23628800 3823.3 3175.3 3604.4 2352.87 3635.3 3784.9 4400.1 3403.1 3670.4 4084.6 TRUE FALSE 3498.108258 2968.587393 3359.74337 2534.088455 3490.498303 3999.197767 4106.577357 3373.347055 4051.951215 4590.631085 0.762010319 0.646662156 0.731869607 0.552013091 0.760352605 0.871165139 0.894556169 0.734832966 0.882656685 1 12.16447678 -6.566153377 4.459407118 0.859596616 0.672958692 0.585429407 0.080178271 0.154047012 6.788548567 0.026006216 0.026537112 2.72E-07 6.566153377 -0.186637925 VVPGQFDDADSS(ph)DSENR ddPTM_A459_MK2206_30min_R2 4 VVPGQFDDADSSDSENR 17 0 Q9BRS2;E9PFQ8 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 1 VVPGQFDDADS(0.227)S(0.773)DSENR;VVPGQFDDADS(0.045)S(0.842)DS(0.113)ENR;VVPGQFDDADS(0.063)S(0.936)DS(0.001)ENR;VVPGQFDDADS(0.339)S(0.477)DS(0.184)ENR 272.13 9.37E-52 69575800 167901 143236 158703 175939 159522 163490 179003 150344 146474 184712 TRUE FALSE 180755.6297 136123.1085 163994.0788 161564.2209 153258.3647 169711.7265 155499.6911 169994.477 159214.0438 178684.8626 1.011588934 0.761805486 0.917783837 0.904185271 0.857702004 0.949782338 0.870245464 0.951364735 0.891032634 1 17.44705789 -10.64397566 0.285122711 1.06390177 0.884650402 0.174246549 0.063232926 25.5605555 1.688636543 1.346143504 0.073007174 2.27E-11 10.64397566 -0.179251368 VVPGQFDDADSS(ph)DSENRDLK ddPTM_A459_MK2206_30min_R1 3 VVPGQFDDADSSDSENRDLK 20 1 Q9BRS2;E9PFQ8 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 1 VVPGQFDDADS(0.286)S(0.713)DS(0.001)ENRDLK;VVPGQFDDADS(0.218)S(0.782)DSENRDLK;VVPGQFDDADS(0.06)S(0.93)DS(0.01)ENRDLK 142.32 2.81E-05 54634400 12815.3 13566 13091.4 13292.3 12241.8 9950.3 11115 13647.2 9460.1 6776.6 TRUE FALSE 11725.29144 12682.85093 12202.79224 14316.07525 11754.18318 10513.67739 10373.53863 13527.88397 10443.51125 7616.136369 1.539532759 1.665260484 1.602228696 1.879703114 1.54332625 1.380447628 1.362047386 1.776213465 1.371234802 1 12.8948436 -6.518354152 10.7666099 1.429448483 1.671937364 0.320507701 0.195091515 0.229010843 463.8586824 0.061273341 0.064226943 3.03E-07 6.518354152 0.242488881 VVPGQFDDADSS(ph)DSENRDLK ddPTM_A459_MK2206_30min_R2 2 VVPGQFDDADSSDSENRDLK 20 1 Q9BRS2;E9PFQ8 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 1 VVPGQFDDADS(0.306)S(0.632)DS(0.062)ENRDLK;VVPGQFDDADS(0.225)S(0.775)DSENRDLK 111.6 0.0001911 27710700 45279 72875 57598 73937 73230 58778 70904 58989 70000 65788 TRUE FALSE 48745.59505 69256.13347 59518.28857 67896.11059 70354.62225 61014.83798 61594.21963 66699.06484 76088.47347 63641.34295 0.765942276 1.088225519 0.935214215 1.066855403 1.105486135 0.95872958 0.967833436 1.048046156 1.195582462 1 15.95767666 -4.754773988 24.99968316 1.036877618 0.765941818 0.547093494 0.074915959 181.6832066 681372.0871 0.01876702 0.177278562 1.76E-05 4.754773988 -0.2709358 VVPS(ph)PLQFCAATPK ddPTM_A459_MK2206_30min_R1 2 VVPSPLQFCAATPK 14 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 VVPS(1)PLQFCAATPK;VVPS(0.998)PLQFCAAT(0.002)PK 135.55 0.00060239 41252000 7561.7 7765 8106.2 7481.6 8453.3 6694.6 7806.8 7913.2 7258.4 6821.8 TRUE FALSE 6918.537707 7259.497089 7555.973729 8057.834128 8116.587161 7073.642467 7286.022616 7844.015727 8012.936654 7666.936086 0.90238625 0.94685765 0.985527158 1.050984909 1.058648079 0.922616595 0.95031738 1.023096533 1.045128923 1 12.90443444 -5.091653955 2.252123323 1.004819495 0.90313249 0.400564001 0.041200612 0.41831265 3.665534465 0.012401618 0.064723908 8.10E-06 5.091653955 -0.101687005 VVPS(ph)PLQFCAATPK ddPTM_A459_MK2206_30min_R2 2 VVPSPLQFCAATPK 14 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 VVPS(0.99)PLQFCAAT(0.01)PK;VVPS(0.993)PLQFCAAT(0.007)PK 142.74 0.00054367 47116000 127290 158596 148435 172801 181437 157781 186315 138205 166950 173203 TRUE FALSE 137035.4203 150720.3533 153383.7488 158682.6055 174312.8717 163785.4665 161851.6167 156268.868 181471.0092 167551.4003 0.817870934 0.899546963 0.915442954 0.947068215 1.04035461 0.977523711 0.96598188 0.932662262 1.083076649 1 17.35424422 -4.626997479 0.672384811 0.996862315 0.678065401 0.665461463 0.041005104 2.427141239 0.71909532 0.018340648 0.621438969 2.36E-05 4.626997479 -0.318796914 VVPSFLPVDQGGS(ph)LVGR ddPTM_A459_MK2206_30min_R2 2 VVPSFLPVDQGGSLVGR 17 0 Q14126 Q14126 DSG2 Desmoglein-2 1 VVPSFLPVDQGGS(1)LVGR;VVPSFLPVDQGGS(1)LVGR 125.96 0.001206 11025100 32508 16101.3 17241.1 17232.9 10637 23158 29083 13566.3 27018 18796.7 TRUE FALSE 34996.83747 15301.73286 17815.90967 15824.91694 10219.33793 24039.29392 25264.36717 15339.46199 29367.9768 18183.36522 1.924662297 0.841523704 0.979791664 0.870296381 0.562015766 1.322048676 1.389421972 0.84359863 1.6151013 1 14.15033161 VVS(ph)ETNDTK ddPTM_A459_MK2206_30min_R1 3 VVSETNDTK 9 0 P05783 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 VVS(0.996)ET(0.004)NDTK;VVS(0.679)ET(0.315)NDT(0.006)K;VVS(0.959)ET(0.038)NDT(0.003)K 131.12 0.0036806 106854900 13221.4 14347.3 13179.1 10502 11308.7 9770.1 12792.9 12866 9394.4 12262.2 TRUE FALSE 12096.8505 13413.28816 12284.53941 11310.86586 10858.25053 10323.27462 11939.50898 12753.51392 10370.9815 13781.33391 0.877770656 0.973293895 0.891389723 0.820738104 0.787895468 0.749076591 0.866353653 0.925419412 0.752538293 1 13.75042791 -5.587048017 4.55666904 0.835174329 0.927356949 0.158300219 0.075904925 0.309767284 12.73071977 0.020372211 0.037113453 2.59E-06 5.587048017 0.09218262 VVS(ph)ETNDTK ddPTM_A459_MK2206_30min_R2 2 VVSETNDTK 9 0 P05783 P05783 KRT18 "Keratin, type I cytoskeletal 18" 1 VVS(0.999)ET(0.001)NDTK;VVS(0.812)ET(0.046)NDT(0.142)K 97.779 0.020287 84033000 163040 165044 136226 157987 144324 118981 173601 150114 127455 163897 TRUE FALSE 175522.4678 156848.155 140767.7068 145078.9567 138657.1146 123508.9053 150806.9802 169734.4152 138540.8055 158549.0543 1.10705465 0.989272094 0.887849552 0.915041451 0.874537632 0.778994904 0.951169219 1.070548266 0.873804048 1 17.27456975 -4.872968149 2.680871696 0.916170368 1.12556054 0.374731863 0.074515159 0.419351176 4.682979318 0.020552292 0.181436411 1.34E-05 4.872968149 0.209390172 VVS(ph)STSEEEEAFTEK ddPTM_A459_MK2206_30min_R1 1 VVSSTSEEEEAFTEK 15 0 Q8N573-5;Q8N573-8;Q8N573-3;Q8N573-2;Q8N573 Q8N573-5 OXR1 Oxidation resistance protein 1 1 VVS(0.597)S(0.174)T(0.174)S(0.056)EEEEAFTEK 206.67 2.00E-06 3392900 1673.4 1843.8 1566.2 1244.1 1267.1 1104.3 997.18 845.85 957.9 960.4 TRUE FALSE 1531.068543 1723.768285 1459.890708 1339.920798 1216.628724 1166.824512 930.6599417 838.4548226 1057.477133 1079.381603 1.418468259 1.59699617 1.352525098 1.241378206 1.127153475 1.081012043 0.862215865 0.776791841 0.979706464 1 10.07598929 -6.211035261 0.858405263 0.887272195 1.528349034 0.876239897 0.086152276 0.201299281 0.315359132 0.04438073 0.078439429 6.15E-07 6.211035261 0.64107684 VVS(ph)STSEEEEAFTEK ddPTM_A459_MK2206_30min_R2 1 VVSSTSEEEEAFTEK 15 0 Q8N573-5;Q8N573-8;Q8N573-3;Q8N573-2;Q8N573 Q8N573-5 OXR1 Oxidation resistance protein 1 1 VVS(0.332)S(0.332)T(0.332)S(0.005)EEEEAFTEK 217.19 3.30E-09 6603600 36478 37720 38126 37546 26011 26669 27201 26219 22891 22865 TRUE FALSE 39270.78373 35846.87965 39397.10181 34478.3717 24989.67745 27683.90748 23629.47603 29645.91332 24882.0178 22118.91692 1.775438818 1.620643532 1.781149681 1.558773055 1.129787572 1.251594171 1.068292634 1.340296789 1.124920261 1 14.43299312 -6.135680851 3.388652496 1.169116205 1.712295781 0.875247786 0.099414928 0.080201828 1.706838618 0.028726968 0.038520059 7.32E-07 6.135680851 0.543179575 VVSAPVGKET(ph)PSKR ddPTM_A459_MK2206_30min_R1 2 VVSAPVGKETPSKR 14 2 Q13416 Q13416 ORC2 Origin recognition complex subunit 2 1 VVS(0.001)APVGKET(0.909)PS(0.09)KR;VVSAPVGKET(0.5)PS(0.5)KR 210.02 9.20E-05 17532000 6127.9 6650.9 5891.7 5742.4 4595.5 4622.4 5234.4 5330.1 4803.2 3947.3 TRUE FALSE 5606.689926 6217.925201 5491.787819 6184.680643 4412.451504 4884.116293 4885.222727 5283.499498 5302.509828 4436.321325 1.263815111 1.401594868 1.237914799 1.394101146 0.994619456 1.100938353 1.101187757 1.190964114 1.195249271 1 12.11514815 -6.254603214 24.9999524 1.107098353 1.323699107 0.669116267 0.078081848 344.8440904 1261098.603 0.023153169 0.029221199 5.56E-07 6.254603214 0.216600754 VVSETNDTK ddPTM_A459_MK2206_30min_R2 1 VVSETNDTK 9 0 P05783 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 150.27 0.018532 7113100 31400 15386 20510 23145 30023 19030 22611 75535 54177 32514 FALSE TRUE 33804.00814 14621.95361 21193.79316 21253.97946 28844.14617 19754.19998 19642.14854 85407.68385 58889.21753 31453.07084 1.074744285 0.464881591 0.673822701 0.675736228 0.917053419 0.628053143 0.624490646 2.715400486 1.872288332 1 14.94091326 -7.741312097 24.99936267 1.970383327 0.71291868 0.604986882 0.419328305 128.8153254 159997.1613 0.184744523 0.106490964 1.81E-08 7.741312097 -1.257464647 VVSISSEHLEPIT(ph)PTK ddPTM_A459_MK2206_30min_R1 1 VVSISSEHLEPITPTK 16 0 O00267-2;O00267 O00267-2 SUPT5H Transcription elongation factor SPT5 1 VVSISSEHLEPIT(0.956)PT(0.044)K 113.86 0.0029818 19634000 6237.9 3476.3 4793 3178.7 7085 6779.8 7554.3 5569.6 3936.6 4069.7 TRUE FALSE 5707.333848 3249.992238 4467.664514 3423.524025 6802.789447 7163.666417 7050.366431 5520.905574 4345.823657 4573.885161 1.247808733 0.710553965 0.976776713 0.748493656 1.487310942 1.56621038 1.54143932 1.207049451 0.950138341 1 12.15920443 -6.261657304 24.99999994 1.328557225 0.909873559 0.358067385 0.240283886 20.61707194 2365148.737 0.074972711 0.090461363 5.47E-07 6.261657304 -0.418683667 VVSISSEHLEPIT(ph)PTK ddPTM_A459_MK2206_30min_R2 5 VVSISSEHLEPITPTK 16 0 O00267-2;O00267 O00267-2 SUPT5H Transcription elongation factor SPT5 1 VVSISSEHLEPIT(0.843)PT(0.157)K;VVSISSEHLEPIT(0.97)PT(0.03)K;VVSISSEHLEPIT(0.71)PT(0.29)K;VVSISSEHLEPIT(0.998)PT(0.002)K;VVSISSEHLEPIT(0.802)PT(0.198)K 158.14 0.00016629 45051400 130414.6 230314 168343 264427 297796 278940 298086 198670 235897 192452 TRUE FALSE 140399.242 218876.9417 173955.4716 242822.4682 286103.0327 289555.2572 258946.9501 224636.8511 256414.8947 186172.307 0.754136017 1.175668633 0.934378879 1.304288872 1.536764717 1.555307886 1.3908994 1.206607227 1.377298798 1 17.50627896 -5.824625733 5.005567134 1.37131238 0.976173063 0.487701876 0.17863001 0.163559389 7.992944018 0.050187746 0.0773836 1.50E-06 5.824625733 -0.395139317 VVSQSQPGS(ph)R ddPTM_A459_MK2206_30min_R2 3 VVSQSQPGSR 10 0 Q7Z460-4 Q7Z460-4 CLASP1 CLIP-associating protein 1 1 VVSQSQPGS(1)R;VVSQSQPGS(1)R;VVSQSQPGS(1)R 115.92 0.0064967 54199000 46004 49090 46338 54787 58179 52877 53111 48055 48962 49522 TRUE FALSE 49526.10161 46652.26198 47882.88579 50310.72685 55894.60013 54889.27129 46137.4619 54335.9535 53220.62626 47906.1012 1.033816161 0.97382715 0.999515398 1.05019456 1.166753268 1.145767865 0.963081126 1.134217817 1.110936288 1 15.54792179 -5.938480232 4.417156526 1.091718967 1.000694778 0.271393565 0.061355099 0.264301141 10.45369307 0.017883632 0.026885303 1.15E-06 5.938480232 -0.091024189 VVSS(ph)TSEEEEAFTEK ddPTM_A459_MK2206_30min_R1 2 VVSSTSEEEEAFTEK 15 0 Q8N573-5;Q8N573-8;Q8N573-3;Q8N573-2;Q8N573 Q8N573-5 OXR1 Oxidation resistance protein 1 1 VVSS(0.944)T(0.028)S(0.028)EEEEAFTEK;VVS(0.008)S(0.929)T(0.059)S(0.004)EEEEAFTEK 312.67 1.04E-94 11778100 8966.3 8685 8188.9 7736.7 7393.8 4879.9 6442.1 6149.6 5983.6 5346.2 TRUE FALSE 8203.669101 8119.604921 7633.060284 8332.581975 7099.289289 5156.195721 6012.359263 6095.834696 6605.616633 6008.527618 1.365337671 1.351346859 1.270371174 1.386792656 1.181535601 0.858146296 1.000637701 1.014530528 1.099373599 1 12.55279579 -6.531199803 4.919201838 0.996065523 1.334625025 0.87468005 0.062257619 0.062867118 4.281276878 0.021078824 0.022035955 2.94E-07 6.531199803 0.338559502 VVSS(ph)TSEEEEAFTEK ddPTM_A459_MK2206_30min_R2 1 VVSSTSEEEEAFTEK 15 0 Q8N573-5;Q8N573-8;Q8N573-3;Q8N573-2;Q8N573 Q8N573-5 OXR1 Oxidation resistance protein 1 1 VVS(0.001)S(0.5)T(0.5)SEEEEAFTEK 278.64 4.44E-55 6152500 43947 51675 42027 50892 41070 35191 41458 28546 23876 31745 TRUE FALSE 47311.61611 49108.89464 43428.1592 46733.9608 39457.38544 36530.21816 36014.5148 32277.06021 25952.69132 30709.16325 1.540635143 1.599160949 1.41417592 1.521824624 1.284873349 1.189554332 1.172761189 1.051056323 0.845112291 1 14.90638158 -6.851421161 0.656122664 0.928453832 1.577941132 0.915033273 0.070360587 0.198566994 0.185064197 0.055130118 0.053568056 1.41E-07 6.851421161 0.6494873 VVSST(ph)SEEEEAFTEK ddPTM_A459_MK2206_30min_R1 1 VVSSTSEEEEAFTEK 15 0 Q8N573-5;Q8N573-8;Q8N573-3;Q8N573-2;Q8N573 Q8N573-5 OXR1 Oxidation resistance protein 1 1 VVS(0.025)S(0.007)T(0.942)S(0.025)EEEEAFTEK 225.21 7.24E-10 3296200 1974.4 1917 1815 1419.9 1590.8 1389.6 970 1132.7 1028.9 820.17 TRUE FALSE 1806.466912 1792.202952 1691.802857 1529.260944 1527.435067 1468.277951 905.2930699 1122.796923 1135.857837 921.7788516 1.959761725 1.94428734 1.835367403 1.659032361 1.657051542 1.592874417 0.982115253 1.218076246 1.232245495 1 9.848276858 -6.762619367 0.719017474 1.061149865 1.957322859 0.884550729 0.12006009 0.229900166 0.260917916 0.09077117 0.091248541 1.73E-07 6.762619367 0.896172995 VVSST(ph)SEEEEAFTEK ddPTM_A459_MK2206_30min_R2 1 VVSSTSEEEEAFTEK 15 0 Q8N573-5;Q8N573-8;Q8N573-3;Q8N573-2;Q8N573 Q8N573-5 OXR1 Oxidation resistance protein 1 1 VVS(0.01)S(0.01)T(0.981)SEEEEAFTEK 221.85 3.65E-09 2592700 13994 15181 12149 10489 10858 8708.2 8199.3 6741.1 6824.3 9108.6 TRUE FALSE 15065.3914 14427.13362 12554.0416 9632.015147 10431.66036 9039.596653 7122.722061 7622.184916 7417.865278 8811.387128 1.709763875 1.637328312 1.424752019 1.093132671 1.183884014 1.025899387 0.80835423 0.865038025 0.841849889 1 13.10515344 -5.560045316 0.660432429 0.866368447 1.912468185 0.929411442 0.082348133 0.347065946 0.219785138 0.045302953 0.238903824 2.75E-06 5.560045316 1.046099738 VVSSVSSS(ph)PR ddPTM_A459_MK2206_30min_R2 3 VVSSVSSSPR 10 0 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 VVS(0.002)S(0.029)VS(0.015)S(0.008)S(0.946)PR;VVS(0.003)S(0.052)VS(0.018)S(0.014)S(0.912)PR;VVS(0.002)S(0.094)VS(0.061)S(0.175)S(0.668)PR 112.94 0.0079334 64818000 371977 418355 375928 463314 402277 451909 510486 435956 431352 490160 TRUE FALSE 400455.8451 397580.099 388461.2519 425459.7641 386481.5837 469106.7137 443458.575 492936.9461 468870.2173 474166.1193 0.844547573 0.838482723 0.819251389 0.897279976 0.815076337 0.989329888 0.935238848 1.039587026 0.988831125 1 18.85503306 -6.768619096 24.99963137 0.98961169 0.84438489 0.846458473 0.031441991 62.36320482 217146.0561 0.010871583 0.009785042 1.70E-07 6.768619096 -0.1452268 VVTDTDETELAR ddPTM_A459_MK2206_30min_R2 1 VVTDTDETELAR 12 0 P05198 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 0 155 0.0059159 5429900 10633 14982 15462 15802 15166 13655 16491 17011 15221 13651 FALSE TRUE 11447.07066 14238.01567 15977.49536 14510.92605 14570.50664 14174.65059 14325.71189 19234.39611 16544.89507 13205.56899 0.86683661 1.078182673 1.209905865 1.098848983 1.10336076 1.073384313 1.084823524 1.456536718 1.252872563 1 13.68885884 -7.589230071 24.99770007 1.266960578 1.080835281 0.235343414 0.130673113 70.01772731 26377.60314 0.059772856 0.034509876 2.57E-08 7.589230071 -0.186125297 VVTS(ph)ENEAGK ddPTM_A459_MK2206_30min_R1 1 VVTSENEAGK 10 0 P49321-4;P49321;P49321-3;E9PPR5 P49321-4 NASP Nuclear autoantigenic sperm protein 1 VVT(0.011)S(0.989)ENEAGK 123.01 0.0042874 6122400 5850.1 6320.2 5950.7 5788.3 5378.5 5282 6300 4953.9 5071.2 5224.7 TRUE FALSE 5352.518275 5908.753831 5546.783064 6234.115869 5164.262956 5581.062275 5879.738495 4910.588575 5598.369387 5871.97528 0.911536241 1.006263404 0.944619621 1.061672703 0.879476277 0.950457386 1.001322079 0.836275417 0.953404795 1 12.51963018 -6.285267982 24.99272486 0.932543145 0.980225668 0.114424589 0.059513262 1622.923957 1702204.242 0.017862551 0.020265434 5.18E-07 6.285267982 0.047682523 VVVDPVVTEQPSTSS(ph)AAK ddPTM_A459_MK2206_30min_R1 1 VVVDPVVTEQPSTSSAAK 18 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 VVVDPVVTEQPS(0.041)T(0.041)S(0.22)S(0.697)AAK 124.04 0.0010126 0 870.27 840.84 1054 705.82 819.37 773.09 862.79 982.79 646.75 684.69 TRUE FALSE 796.2489665 786.1011632 982.4574166 760.1823787 786.7327579 816.8616877 805.2348533 974.1975706 713.9819769 769.5145663 1.034741903 1.021554624 1.276723612 0.98787263 1.022375394 1.061528558 1.046419247 1.265989772 0.927834258 1 9.587804826 VVVHHVTVS(ph)PLR ddPTM_A459_MK2206_30min_R2 2 VVVHHVTVSPLR 12 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 VVVHHVT(0.236)VS(0.764)PLR;VVVHHVT(0.008)VS(0.992)PLR 121.18 0.0025463 10036800 59644 87056 71891 83400 70182 87404 86462 72919 70834 75815 TRUE FALSE 64210.3905 82732.92563 74287.81006 76585.95322 67426.30204 90730.22047 75109.43554 82449.76367 76995.01328 73341.16276 0.875502761 1.128055822 1.012907449 1.044242419 0.919351419 1.2370982 1.024110237 1.124194935 1.049819915 1 16.16233552 -6.731414431 24.99998104 1.090873792 1.006965922 0.204565705 0.088283224 352.1749009 293234.3207 0.02754642 0.027542888 1.86E-07 6.731414431 -0.08390787 VVVS(ph)PTK ddPTM_A459_MK2206_30min_R1 2 VVVSPTK 7 0 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 NCL Nucleolin 1 VVVS(0.998)PT(0.002)K;VVVS(0.986)PT(0.014)K 138.08 0.0054239 388990000 22735 24734 22724 19862.5 17668.7 14919.8 19759.4 17912 20404.2 21259.7 TRUE FALSE 20801.26886 23123.8121 21181.55819 21392.31319 16964.91826 15764.54618 18441.28648 17755.39727 22525.28961 23893.51214 0.870582305 0.967786233 0.886498313 0.895318908 0.710021958 0.659783547 0.77181146 0.743105374 0.942736651 1 14.54433131 -6.136267247 6.633231491 0.783100224 0.91033237 0.176657507 0.100151816 0.34174216 17.02965886 0.029338606 0.038081606 7.31E-07 6.136267247 0.127232147 VVVS(ph)PTK ddPTM_A459_MK2206_30min_R2 7 VVVSPTK 7 0 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 NCL Nucleolin 1 VVVS(0.987)PT(0.013)K;VVVS(0.996)PT(0.004)K;VVVS(0.993)PT(0.007)K;VVVS(0.996)PT(0.004)K;VVVS(0.986)PT(0.014)K;VVVS(0.998)PT(0.002)K;VVVS(1)PTK 125.71 0.011002 980210000 2488404 2375234 2192847 2136184 2071224 1710945 2660358 1903867 1706934 2338720 TRUE FALSE 2678918.123 2257283.333 2265955.425 1961650.934 1989897.339 1776056.211 2311049.799 2152708.954 1855400.034 2262407.758 1.184100485 0.997734969 1.001568093 0.867063387 0.879548495 0.785029226 1.021500121 0.951512364 0.820099749 1 21.10942754 -4.479156324 1.087631246 0.903428589 1.485404789 0.560301568 0.073624788 2.254734273 1.424640819 0.023268776 1.767286705 3.32E-05 4.479156324 0.5819762 VVVS(ph)PTKK ddPTM_A459_MK2206_30min_R1 2 VVVSPTKK 8 1 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 NCL Nucleolin 1 VVVS(0.775)PT(0.225)KK;VVVS(0.776)PT(0.224)KK 109.83 0.022058 5045000000 13292.9 14293.4 14753 11755.2 8776.1 8135.8 10898 11046.7 5634.5 10373.2 TRUE FALSE 12162.26905 13362.89706 13751.60746 12660.58754 8426.529353 8596.441965 10171.0143 10950.11987 6220.226438 11658.31033 1.043227424 1.14621216 1.179554076 1.085971053 0.722791649 0.737366027 0.872426108 0.939254451 0.533544421 1 13.50907109 -6.19791472 5.922920107 0.798514502 1.124236179 0.60011804 0.125127159 0.150569565 10.59697516 0.036164351 0.04672982 6.34E-07 6.19791472 0.325721677 VVVS(ph)PTKK ddPTM_A459_MK2206_30min_R2 1 VVVSPTKK 8 1 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 NCL Nucleolin 1 VVVS(0.5)PT(0.5)KK 95.483 0.039238 1765900000 6225300 5714600 5621400 5129700 5410500 3338600 6797600 4395200 3966200 5566600 TRUE FALSE 6701913.754 5430821.274 5808814.67 4710587.101 5198056.584 3465652.762 5905066.955 4969667.731 4311172.907 5384962.298 1.244560943 1.008516118 1.07871037 0.87476696 0.965291175 0.643579764 1.096584642 0.922878835 0.800594817 1 22.36050481 -4.107410316 0.758049666 0.896954488 1.909056545 0.41122119 0.121748389 6.61467913 1.392408845 0.045480854 7.212307529 7.81E-05 4.107410316 1.012102057 VVVT(ph)VEQTEEELER ddPTM_A459_MK2206_30min_R1 1 VVVTVEQTEEELER 14 0 O15269 O15269 SPTLC1 Serine palmitoyltransferase 1 1 VVVT(1)VEQTEEELER 112.3 0.0085565 10217000 2019.7 1813.2 1661.3 1513.3 1813.8 1718.9 1793.9 1878.2 2063.7 2046.1 TRUE FALSE 1847.913909 1695.16035 1548.535585 1629.854628 1741.552505 1816.222633 1674.232204 1861.779095 2278.229 2299.586315 0.803585365 0.737158827 0.67339746 0.708759927 0.757332958 0.789804071 0.728057996 0.809614792 0.99071254 1 11.16715864 -8.175948653 2.698996793 1.006459988 0.74100768 0.886828314 0.035582952 0.091170855 1.193628422 0.033807382 0.010301091 6.67E-09 8.175948653 -0.265452307 VVY(ph)S(ph)ILQGQPY(ph)FS(ph)VDSK ddPTM_A459_MK2206_30min_R2 1 VVYSILQGQPYFSVDSK 17 0 Q9HBT6 Q9HBT6 CDH20 Cadherin-20 4 VVY(1)S(1)ILQGQPY(0.948)FS(0.83)VDS(0.222)K 51.469 0.039543 6736900 10427 16937 11715 17230 15387 18709 12071 9868 9655.5 7375.2 TRUE FALSE 11225.29914 16095.93321 12105.57225 15822.25388 14782.82907 19420.98411 10486.0632 11157.78148 10495.31794 7134.547828 1.573372189 2.256055127 1.696753956 2.217695398 2.072006443 2.72210441 1.469758624 1.563908709 1.471055796 1 12.80060628 -7.478869977 23.67308476 1.413855822 2.085347739 0.534317575 0.325957421 200.7183267 107970.0264 0.133214545 0.089804182 3.32E-08 7.478869977 0.671491917 VVYAFS(ph)PK ddPTM_A459_MK2206_30min_R1 1 VVYAFSPK 8 0 G3V174;A7KAX9-2;A7KAX9 G3V174 ARHGAP32 Rho GTPase-activating protein 32 1 VVY(0.002)AFS(0.998)PK 92.239 0.025743 22156000 5611.7 6948.7 7300.4 6142.6 5605.2 4308.9 5349.7 6122 5919.9 6058.8 TRUE FALSE 5134.395447 6496.338367 6804.869188 6615.704116 5381.933015 4552.866194 4992.831274 6068.475999 6535.29479 6809.409886 0.754014743 0.954023693 0.999333173 0.971553222 0.790367022 0.668613914 0.733225251 0.891189707 0.959744662 1 12.73331406 -4.731942439 23.92868458 0.873701056 0.754013569 0.103257832 0.111449422 6030.642767 4891756.762 0.031203205 3.198631391 1.85E-05 4.731942439 -0.119687487 VVYAFS(ph)PK ddPTM_A459_MK2206_30min_R2 2 VVYAFSPK 8 0 G3V174;A7KAX9-2;A7KAX9 G3V174 ARHGAP32 Rho GTPase-activating protein 32 1 VVYAFS(1)PK;VVYAFS(1)PK 90.827 0.027722 28371000 186865 189878 192350 188727 158394 124452 206505 136300 136435 189325 TRUE FALSE 201171.5281 180448.9346 198762.853 173307.4004 152174.6557 129188.1081 179390.6454 154114.878 148301.8697 183147.3408 1.09841359 0.985266474 1.08526202 0.946273092 0.830886515 0.705378017 0.979488125 0.841480293 0.809740775 1 17.48264523 -5.997791717 3.630369039 0.85243861 1.048285781 0.518061097 0.083791451 0.179335405 5.137420769 0.024494867 0.035616068 1.01E-06 5.997791717 0.195847172 VVYENAYGQFIGPHR ddPTM_A459_MK2206_30min_R1 1 VVYENAYGQFIGPHR 15 0 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;Q16881-7;E2QRB9;E9PKD3 Q16881 TXNRD1 "Thioredoxin reductase 1, cytoplasmic" 0 124.16 0.0019075 8290500 3112.7 3218.3 3232.9 3183.1 3105.6 3249.8 3603.2 2923.7 2974.2 3121 FALSE TRUE 2847.94852 3008.788085 3013.459755 3428.262914 2981.897376 3433.800868 3362.837102 2898.138399 3283.378733 3507.653042 0.811924237 0.857778135 0.859109986 0.977366596 0.850111838 0.978945416 0.958714292 0.826232915 0.936061433 1 11.77629034 -5.598150459 7.117043558 0.924761517 0.840560798 0.365526658 0.05390149 0.249832442 19.50406272 0.014382316 0.025077248 2.52E-06 5.598150459 -0.084200718 VWEDRPS(ph)SAGSTPFPYNPLIMR ddPTM_A459_MK2206_30min_R1 1 VWEDRPSSAGSTPFPYNPLIMR 22 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 VWEDRPS(0.457)S(0.457)AGS(0.062)T(0.024)PFPYNPLIMR 72.654 0.0015571 18152000 903.94 858.39 854.16 722.98 718.35 792.95 975 1062 782.96 745.32 TRUE FALSE 827.0551562 802.508655 796.181999 778.6640449 689.7365984 837.8461437 909.959529 1052.715046 864.3514938 837.6558685 0.987344788 0.958040987 0.950488177 0.929575109 0.823412841 1.000227152 1.086316664 1.256739295 1.031869442 1 9.710213858 -7.16942215 3.362366139 1.116755032 0.931572172 0.495948397 0.076081883 0.188485162 4.05750735 0.031095418 0.023032102 6.77E-08 7.16942215 -0.18518286 VWEDRPS(ph)SAGSTPFPYNPLIMR ddPTM_A459_MK2206_30min_R2 1 VWEDRPSSAGSTPFPYNPLIMR 22 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 VWEDRPS(0.727)S(0.269)AGS(0.003)T(0.001)PFPYNPLIMR 77.668 0.00084469 2670900 5332 5528.5 5674.4 6126.7 4165.3 5972 4919.4 3933.6 5177.7 4745.6 TRUE FALSE 5740.22202 5253.962729 5863.581664 5626.129012 4001.749393 6199.268645 4273.476871 4447.735026 5628.046987 4590.751461 1.250388323 1.144466821 1.277259663 1.225535527 0.871698115 1.35038211 0.93088831 0.968846836 1.225953318 1 12.16451461 VWEDRPSS(ph)AGSTPFPYNPLIMR ddPTM_A459_MK2206_30min_R1 1 VWEDRPSSAGSTPFPYNPLIMR 22 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 VWEDRPS(0.234)S(0.754)AGS(0.011)T(0.001)PFPYNPLIMR 96.723 0.00010705 10970000 1060.2 970.83 1085.6 849.95 1467.6 961.03 762.56 852.27 891.48 788.73 TRUE FALSE 970.0244227 907.6287905 1011.912497 915.4132963 1409.142384 1015.442688 711.6910138 844.8186932 984.1525362 886.443827 1.094287526 1.023898822 1.141541591 1.032680547 1.589657846 1.145524011 0.802860815 0.953042559 1.110225495 1 9.791885402 -7.030877808 23.76707434 0.964272314 1.178975022 0.271845609 0.164755241 528.3690617 406690.9617 0.066189612 0.051350416 9.31E-08 7.030877808 0.214702708 VWEDRPSS(ph)AGSTPFPYNPLIMR ddPTM_A459_MK2206_30min_R2 1 VWEDRPSSAGSTPFPYNPLIMR 22 1 C9J0Q5;C9JE98;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 VWEDRPS(0.086)S(0.913)AGS(0.001)TPFPYNPLIMR 61.959 0.006574 2761400 4863.3 4260.6 3545.6 4439 3683.6 3498.6 4903.3 3820.1 3329.2 4923.5 TRUE FALSE 5235.637987 4049.024799 3663.808534 4076.3195 3538.963355 3631.741675 4259.49082 4319.400186 3618.767798 4762.846598 1.099266558 0.850127065 0.769247646 0.855857819 0.743035343 0.762514937 0.894316189 0.906894668 0.759790962 1 12.21760837 -4.764687269 4.95580515 0.828679542 1.116279595 0.502429586 0.077795302 0.135537924 8.634753353 0.018797232 0.135882552 1.72E-05 4.764687269 0.287600053 VWLDPNETNEIANANSR ddPTM_A459_MK2206_30min_R1 1 VWLDPNETNEIANANSR 17 0 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 0 201.72 5.77E-07 4304200 774.59 865.13 734.39 571.27 1107.4 738.63 900.92 736.18 525.14 801.11 FALSE TRUE 708.707053 808.8098798 684.5416529 615.2693144 1063.289913 780.4505923 840.8212706 729.7436559 579.7301822 900.3575549 0.787139564 0.898320756 0.760299782 0.683361084 1.18096406 0.866822951 0.933874843 0.810504285 0.643888841 1 9.814354236 -3.759369435 23.98814433 0.856379896 0.656648057 0 0.150024436 0 0 0.034317109 0 0.000174033 3.759369435 -0.19973184 VWS(ph)PLVTEEGK ddPTM_A459_MK2206_30min_R1 4 VWSPLVTEEGK 11 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 VWS(0.992)PLVT(0.008)EEGK;VWS(1)PLVTEEGK;VWS(0.988)PLVT(0.012)EEGK;VWS(1)PLVTEEGK 130.56 0.0023697 79486000 18094.8 19912.2 19061.4 14619.4 13163.5 12400.4 16099.5 14521.9 17074.9 17555.9 TRUE FALSE 16555.74224 18615.91216 17767.56528 15745.38872 12639.16992 13102.49993 15025.53173 14394.93656 18849.89696 19730.85743 0.839078702 0.943492305 0.900496359 0.798008337 0.640578848 0.664061356 0.76152452 0.729564673 0.955351131 1 14.26816603 -5.825601209 4.628681223 0.766602923 0.899774984 0.124379027 0.111232208 0.313158707 13.12785554 0.031477617 0.048978786 1.49E-06 5.825601209 0.133172061 VWS(ph)PLVTEEGK ddPTM_A459_MK2206_30min_R2 3 VWSPLVTEEGK 11 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 VWS(0.999)PLVT(0.001)EEGK;VWS(1)PLVTEEGK;VWS(0.996)PLVT(0.004)EEGK 121.04 0.0045559 45985900 134104 114807 101983 117874 101955 84648 120296 95689 67207 114248 TRUE FALSE 144371.1053 109105.8513 105383.0623 108243.3171 97951.73442 87869.33896 104500.9907 108195.8808 73052.54338 110520.0971 1.30628826 0.987203723 0.953519451 0.979399403 0.886279844 0.795053038 0.945538354 0.978970193 0.660988773 1 16.75394921 -1.522886319 0.864261129 0.885553932 161.639893 0.618165254 0.096553677 473.509251 1.237294627 0.032049421 149801.3592 0.029999477 1.522886319 160.7543391 VWS(ph)PLVTEEGKR ddPTM_A459_MK2206_30min_R1 2 VWSPLVTEEGKR 12 1 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 VWS(1)PLVTEEGKR;VWS(1)PLVTEEGKR 89.992 0.012844 105271000 7739.2 7557.7 7318 6427.9 5978.5 6175 7653.8 6234.8 7274.2 6716.1 TRUE FALSE 7080.9404 7065.692356 6821.274549 6922.977972 5740.363685 6524.623164 7143.228967 6180.289801 8030.379121 7548.141172 0.938103864 0.936083758 0.903702566 0.917176536 0.760500308 0.864401316 0.946356037 0.818783017 1.063888305 1 12.88190569 -8.270058401 24.95541753 1.031944172 0.886118091 0.509816755 0.057382805 572.3004958 1657011.68 0.053852657 0.014796449 5.37E-09 8.270058401 -0.145826081 VWS(ph)PLVTEEGKR ddPTM_A459_MK2206_30min_R2 3 VWSPLVTEEGKR 12 1 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 VWS(0.999)PLVT(0.001)EEGKR;VWS(1)PLVTEEGKR;VWS(1)PLVTEEGKR 141.34 0.0017952 53788400 127725 118587 114877 130287 109309 82141 126818 83325 85324 114147 TRUE FALSE 137503.7242 112698.142 118706.9418 119642.1353 105016.9794 85266.93331 110166.6443 94215.8636 92745.32729 110422.3927 1.24525217 1.020609491 1.075025988 1.083495226 0.951047852 0.772188785 0.997683908 0.853231498 0.839914124 1 16.75267324 -6.333288407 3.31488476 0.887816489 1.100357591 0.591317516 0.083848942 0.176237544 3.798232074 0.026178087 0.030848948 4.64E-07 6.333288407 0.212541102 VY(ph)Y(ph)VS(ph)EK ddPTM_A459_MK2206_30min_R2 1 VYYVSEK 7 0 J3QLW7;Q9Y221-2;Q9Y221 J3QLW7 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog 3 VY(1)Y(1)VS(1)EK 44.721 0.043543 1935700 0 0 0 0 0 0 0 0 0 0 TRUE FALSE 0 0 0 0 0 0 0 0 0 0 0 VYEDSGIPLPAES(ph)PK ddPTM_A459_MK2206_30min_R1 8 VYEDSGIPLPAESPK 15 0 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK 268.93 7.65E-45 728444800 24615.23 34635.6 34487.6 27710.9 16152.6 15780.24 21111.1 20355.15 31579.9 29762.3 TRUE FALSE 22521.57543 32380.81614 32146.6778 29845.19832 15509.20774 16673.70355 19702.81704 20177.18707 34862.74361 33449.47842 0.673301244 0.968051452 0.961051691 0.892247046 0.463660675 0.498474247 0.589032116 0.603213803 1.042250739 1 15.02969609 -6.213007478 24.27222999 0.664030688 0.886647158 0.142041688 0.197615003 440.7433871 220883.1781 0.058571048 0.075614677 6.12E-07 6.213007478 0.222616469 VYEDSGIPLPAES(ph)PK ddPTM_A459_MK2206_30min_R2 8 VYEDSGIPLPAESPK 15 0 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDS(0.001)GIPLPAES(0.999)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK 219.85 2.30E-09 211793500 702332 617526 655343 513333 543287 378592.8 704173 523593 386117.7 717710 TRUE FALSE 756103.0779 586860.5568 677191.8085 471392.0518 521954.8226 393000.4143 611714.2392 592028.4029 419701.5196 694291.1815 1.089028779 0.845265751 0.975371467 0.678954399 0.751780862 0.566045522 0.881062954 0.852709092 0.604503601 1 19.40518132 -5.751793949 24.97889314 0.752365321 0.95742644 0.33189256 0.134217659 229.8116206 595140.1943 0.035284394 0.060129884 1.77E-06 5.751793949 0.205061119 VYEDSGIPLPAES(ph)PKK ddPTM_A459_MK2206_30min_R1 1 VYEDSGIPLPAESPKK 16 1 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VYEDS(0.003)GIPLPAES(0.997)PKK 60.669 0.036958 17728000 4063.3 6628.1 5708.9 4988.1 2675.6 2856.1 3392.3 3184.9 4787 4718.3 TRUE FALSE 3717.694998 6196.609485 5321.395774 5372.284326 2569.025186 3017.809914 3166.005857 3157.054755 5284.62578 5302.838625 0.701076397 1.16854574 1.003499475 1.013095948 0.48446226 0.569093296 0.597039827 0.595351844 0.996565454 1 12.37254913 -6.240919746 24.73132233 0.674451149 0.987907033 0.294122238 0.196205183 768.072996 925720.9843 0.056654243 0.073049944 5.74E-07 6.240919746 0.313455884 VYEDSGIPLPAES(ph)PKKGPK ddPTM_A459_MK2206_30min_R1 2 VYEDSGIPLPAESPKKGPK 19 2 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VYEDSGIPLPAES(1)PKKGPK;VYEDS(0.001)GIPLPAES(0.999)PKKGPK 95.307 0.00068024 61206000 15632.6 17995 20124.7 27529 16834.5 10520.5 9365.7 21859 6659 2325.8 TRUE FALSE 14302.96528 16823.52223 18758.69143 29649.28835 16163.94622 11116.16162 8740.931242 21667.88907 7351.226879 2613.937663 5.471808101 6.436083946 7.176411167 11.34276795 6.183753517 4.252649853 3.343970809 8.289367178 2.812319124 1 11.35200902 -8.564310427 0.437023843 0.73448311 7.369360877 0.426632529 2.136085055 1.381154948 0.663080759 3.228352706 1.594288252 2.73E-09 8.564310427 6.634877768 VYEDSGIPLPAES(ph)PKKGPK ddPTM_A459_MK2206_30min_R2 2 VYEDSGIPLPAESPKKGPK 19 2 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VYEDSGIPLPAES(1)PKKGPK;VYEDSGIPLPAES(1)PKKGPK 77.324 0.0031975 12311800 31211 179286 116742 117533 260220 131457 181047 83060 238550 86913 TRUE FALSE 33600.53816 170382.9179 120634.12 107930.1779 250002.4553 136459.6883 157275.3114 93916.22719 259298.6478 84077.03593 0.399639899 2.02650957 1.434804625 1.283705791 2.973492732 1.623031625 1.87060961 1.117025905 3.08406029 1 16.35942419 -4.756619621 24.99708473 1.82944975 0.399637718 0.283361052 0.679347734 190.1343614 985992.9033 0.15958607 1.272393883 1.75E-05 4.756619621 -1.429812032 VYFHPMTNAAT(ph)MGLS(ph)PEDFLTFVK ddPTM_A459_MK2206_30min_R1 1 VYFHPMTNAATMGLSPEDFLTFVK 24 0 A6NEY8 A6NEY8 PRORSD1P Putative prolyl-tRNA synthetase associated domain-containing protein 1 2 VY(0.003)FHPMT(0.107)NAAT(0.89)MGLS(0.974)PEDFLT(0.026)FVK 51.586 0.031561 141710000 8643.9 9791.3 10935 8395.2 8940.4 7989.4 10362 9999.4 8330.5 8789.6 TRUE FALSE 7908.690914 9153.88459 10192.76267 9041.799759 8584.284936 8441.752924 9670.769887 9911.9763 9196.485286 9878.522006 0.800594553 0.926645159 1.031810494 0.915298843 0.868984746 0.854556271 0.978969311 1.003386569 0.930957615 1 13.27007949 -7.296717381 21.75582751 0.97861073 0.906200439 0.295384616 0.059013285 200.4930005 123641.1103 0.026447016 0.017832823 5.05E-08 7.296717381 -0.072410292 VYFQS(ph)PPGAAGEGPGGADDEGPVRR ddPTM_A459_MK2206_30min_R1 2 VYFQSPPGAAGEGPGGADDEGPVRR 25 1 Q96C90 Q96C90 PPP1R14B Protein phosphatase 1 regulatory subunit 14B 1 VY(0.003)FQS(0.997)PPGAAGEGPGGADDEGPVRR;VY(0.008)FQS(0.992)PPGAAGEGPGGADDEGPVRR 57.351 0.0054694 42694000 1440.71 1513.63 1195.91 1080.27 1525.2 1190.93 1409.31 1307.21 1080.59 827.71 TRUE FALSE 1318.170049 1415.092412 1114.734961 1163.472583 1464.448054 1258.359427 1315.297501 1295.781201 1192.921197 930.2529637 1.417001719 1.521190974 1.198313797 1.250705591 1.574247126 1.352706712 1.413913798 1.392934235 1.282362157 1 9.861479271 -8.701548661 2.24231156 1.000178852 1.389310355 0.557310218 0.104996124 0.540663597 4.990087202 0.103935943 0.028406661 1.99E-09 8.701548661 0.389131503 VYFQS(ph)PPGAAGEGPGGADDEGPVRR ddPTM_A459_MK2206_30min_R2 2 VYFQSPPGAAGEGPGGADDEGPVRR 25 1 Q96C90 Q96C90 PPP1R14B Protein phosphatase 1 regulatory subunit 14B 1 VY(0.044)FQS(0.956)PPGAAGEGPGGADDEGPVRR;VY(0.024)FQS(0.976)PPGAAGEGPGGADDEGPVRR 56.009 0.0063109 16694400 30703 49047 32905 48320 46579 52399 33596 32813 42259 35282 TRUE FALSE 33053.64529 46611.3973 34002.03628 44372.10143 44750.07442 54393.08066 29184.80484 37101.77176 45934.61143 34130.75123 0.968441775 1.36567159 0.996228769 1.300062256 1.311136521 1.593667842 0.855088265 1.087048202 1.345842379 1 15.05878455 -11.04670061 5.970611556 0.999705418 1.205249007 0.075275034 0.212820091 0.000828833 6.61E-05 0.204656676 0.049566211 8.98E-12 11.04670061 0.205543589 VYIIS(ph)NLSWHSK ddPTM_A459_MK2206_30min_R1 1 VYIISNLSWHSK 12 0 O14717-6 O14717-6 1 VY(0.001)IIS(0.992)NLS(0.007)WHSK 80.746 0.020618 28005000 9434.2 3621.8 4381.4 8093.9 4963.5 8441.4 5601 4373.3 3324.2 2558.7 TRUE FALSE 8631.771749 3386.020162 4084.002775 8717.29358 4765.793285 8919.344773 5227.36751 4335.064699 3669.762486 2875.691073 3.001633878 1.177463113 1.420181331 3.031373454 1.657268866 3.10163524 1.817777841 1.507486232 1.276132377 1 11.48969298 -7.806352318 2.459256487 1.193797712 2.170271332 0.310465063 0.649015138 0.398254647 4.771030212 0.438047686 0.183402065 1.56E-08 7.806352318 0.97647362 VYLDLT(ph)PVK ddPTM_A459_MK2206_30min_R1 2 VYLDLTPVK 9 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 VYLDLT(1)PVK;VYLDLT(1)PVK 133.89 0.0070477 24158000 11999 11003 11403.1 8166.4 8793.8 8174.9 9805.3 8441.1 10774.9 10593.6 TRUE FALSE 10978.42204 10286.7027 10629.08934 8795.377543 8443.524325 8637.755773 9151.206328 8367.300353 11894.98941 11906.01515 0.922090381 0.863992072 0.892749523 0.738733945 0.709181386 0.72549511 0.768620417 0.702779246 0.999073936 1 13.53940301 -10.76051349 8.204431864 1.000000108 0.804991169 0.245065288 0.097068145 1.99E-07 1.85E-08 0.097098052 0.023549724 1.74E-11 10.76051349 -0.195008939 VYLDLT(ph)PVK ddPTM_A459_MK2206_30min_R2 1 VYLDLTPVK 9 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 VYLDLT(1)PVK 107.11 0.029879 6779900 54535 48032 46142 48201 49349 33392 48668 34642 33969 49205 TRUE FALSE 58710.24153 45646.80073 47680.35125 44262.82411 47411.3103 34662.75596 42277.83314 39169.82834 36923.56222 47599.44488 1.23342282 0.958977586 1.001699733 0.929902108 0.996047547 0.728217651 0.88820013 0.82290515 0.775714135 1 15.53865713 -1.522878788 0.503508845 0.848261029 12.39304499 0.594934127 0.086547997 73.33468567 0.771728703 0.046069733 897.0658827 0.029999997 1.522878788 11.54478396 VYNYNHLMPTR ddPTM_A459_MK2206_30min_R2 2 VYNYNHLMPTR 11 0 K7ELC7;P61353 K7ELC7 RPL27 60S ribosomal protein L27 0 ; 121.68 0.0061415 9282600 51906 61109 68640 55148 68625 81764 69518 54233 65206 71451 FALSE TRUE 55879.96327 58074.41592 70928.42334 50642.23199 65930.43769 84875.58631 60390.20309 61321.43931 70877.50001 69119.55972 0.808453692 0.840202341 1.026170069 0.732675847 0.953860788 1.227953226 0.87370642 0.887179252 1.025433326 1 16.07680641 -6.510373642 24.91592251 0.999195341 0.86096342 0.282722825 0.113249086 857.3574412 1708254.342 0.036786549 0.039700356 3.09E-07 6.510373642 -0.138231921 VYQWDDPDPR ddPTM_A459_MK2206_30min_R1 1 VYQWDDPDPR 10 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 0 131.62 0.035728 8883500 3002.6 3146.3 2857.1 2500.6 3412.3 2874.9 3233.6 2792.7 2712.9 2576.7 FALSE TRUE 2747.213103 2941.475298 2663.168012 2693.196645 3276.380865 3037.674354 3017.892444 2768.283718 2994.915663 2895.921049 0.948649171 1.015730487 0.919627285 0.929996571 1.131377828 1.048949299 1.042118343 0.955925134 1.034184155 1 11.49980656 -6.208407708 24.99996885 1.034233183 0.955526285 0.415419024 0.04757337 366.0458962 172559.4968 0.014751519 0.019044094 6.19E-07 6.208407708 -0.078706898 VYS(ph)PYNHR ddPTM_A459_MK2206_30min_R2 2 VYSPYNHR 8 0 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 VYS(1)PYNHR;VYS(1)PYNHR 114.86 0.0066992 27843700 152354 207239 190381 197985 194935 166401 175264 165197 146813 208244 TRUE FALSE 164018.3394 196947.8126 196728.2075 181808.9922 187280.8724 172733.5067 152251.6263 186788.8151 159582.5294 201449.0153 0.814192808 0.977655871 0.976565744 0.902506234 0.92966884 0.857455205 0.75578243 0.92722625 0.792173291 1 17.62005523 -6.765297471 21.13634529 0.855057405 0.925472055 0.098630184 0.076350645 25.76969994 141171.0638 0.025163091 0.023109681 1.72E-07 6.765297471 0.07041465 VYS(ph)SMER ddPTM_A459_MK2206_30min_R2 1 VYSSMER 7 0 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6;V9GXZ1 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 VYS(0.5)S(0.5)MER 102.51 0.01923 7687500 58032 59859 61551 64339 61802 51999 79829 57517 44462 48949 TRUE FALSE 62474.97454 56886.4891 63603.07962 59082.29789 59375.34295 53977.85838 69347.35641 65034.66939 48329.22439 47351.79814 1.319379136 1.201358583 1.343203049 1.247730819 1.253919498 1.1399326 1.464513686 1.373436109 1.020641798 1 15.53113159 -8.274353335 23.68269336 1.010320693 1.289369285 0.63053141 0.086499805 286.4879359 525375.135 0.083602893 0.022223983 5.32E-09 8.274353335 0.279048593 VYSS(ph)SEFLAVQPTPTFAER ddPTM_A459_MK2206_30min_R1 2 VYSSSEFLAVQPTPTFAER 19 0 O60307;V9GYV0 O60307 MAST3 Microtubule-associated serine/threonine-protein kinase 3 1 VYS(0.081)S(0.918)S(0.001)EFLAVQPTPTFAER;VYS(0.013)S(0.979)S(0.007)EFLAVQPTPTFAER 286.85 3.01E-85 13179300 2070.9 1674.68 1882.14 1605.6 2584.9 1899.05 2251.5 1965.93 1977.69 1880.05 TRUE FALSE 1894.75908 1565.658028 1754.385581 1729.26359 2481.937959 2006.57257 2101.306543 1948.742081 2183.277953 2112.964788 0.896730079 0.740976867 0.830295702 0.818406251 1.174623436 0.949647898 0.994482518 0.922278541 1.033277017 1 11.04505301 -6.15503074 12.83490439 1.004451694 0.816190502 0.625495397 0.072116842 0.549205707 63.99239444 0.020742836 0.026783898 7.00E-07 6.15503074 -0.188261192 VYSS(ph)SEFLAVQPTPTFAER ddPTM_A459_MK2206_30min_R2 2 VYSSSEFLAVQPTPTFAER 19 0 O60307;V9GYV0 O60307 MAST3 Microtubule-associated serine/threonine-protein kinase 3 1 VYS(0.003)S(0.989)S(0.008)EFLAVQPTPTFAER;VYS(0.043)S(0.952)S(0.005)EFLAVQPTPTFAER 261.59 2.08E-47 5034800 7144.7 10358.6 8326 11822.5 10270.6 10667.4 9720.1 8648.7 10702.5 10902.6 TRUE FALSE 7691.703725 9844.206987 8603.584684 10856.56393 9867.324638 11073.35538 8443.839194 9779.114785 11633.3841 10546.84905 0.729289258 0.933378959 0.815749295 1.029365631 0.93557086 1.049920723 0.800603019 0.927207238 1.103019873 1 13.36452443 -3.828243471 0.787798018 0.965905729 5.90E-13 0.378417125 0.089602575 11.40863171 1.775328959 0.03251132 13.74510412 0.00014851 3.828243471 -0.965905729 VYSYFECR ddPTM_A459_MK2206_30min_R2 1 VYSYFECR 8 0 A0A0C4DFS8;P43490;C9JF35;C9JG65 A0A0C4DFS8 NAMPT Nicotinamide phosphoribosyltransferase 0 138.83 0.033844 7736100 23881 28998 22518 28331 31541 29363 27260 19594 21771 23823 FALSE TRUE 25709.34772 27558.00149 23268.73888 26016.26667 30302.54186 30480.42954 23680.72925 22155.00308 23664.60223 23045.65746 1.115583175 1.195800186 1.009679976 1.12890104 1.314891619 1.322610544 1.027557113 0.961352616 1.026857327 1 14.49220731 -7.456913177 10.1414401 0.995329566 1.177734518 0.497792276 0.087629243 0.56467702 85.00992044 0.04089211 0.027510457 3.49E-08 7.456913177 0.182404952 VYT(ph)HEVVTLWYR ddPTM_A459_MK2206_30min_R1 2 VYTHEVVTLWYR 12 0 A0A087WZZ9;P06493;E5RIU6 A0A087WZZ9 CDK1 Cyclin-dependent kinase 1 1 VYT(1)HEVVTLWYR;VYT(1)HEVVTLWYR 111.66 0.0090888 127098000 11760.8 11395.2 12311.4 11998.2 9816 8926.2 9768.4 9793.7 10127.1 8082.4 TRUE FALSE 10760.4822 10653.37041 11475.73647 12922.30344 9425.007934 9431.59373 9116.767859 9708.074713 11179.84829 9083.708731 1.184591285 1.172799649 1.26333162 1.422580118 1.037572671 1.038297683 1.003639387 1.068734699 1.230758121 1 13.14906573 -6.294875463 24.90874833 1.062383943 1.254717135 0.549299815 0.087640713 499.493361 372104.2166 0.028500265 0.032317823 5.07E-07 6.294875463 0.192333191 VYT(ph)HEVVTLWYR ddPTM_A459_MK2206_30min_R2 1 VYTHEVVTLWYR 12 0 A0A087WZZ9;P06493;E5RIU6 A0A087WZZ9 CDK1 Cyclin-dependent kinase 1 1 VY(0.004)T(0.995)HEVVTLWYR 83.869 0.045569 8853300 36154 45591 33058 40891 49419 38020 44298 32988 36640 36822 TRUE FALSE 38921.97804 43327.01724 34160.13722 37550.0745 47478.56175 39466.87774 38481.61939 37299.64486 39826.88097 35620.50116 1.09268474 1.21635058 0.959002151 1.054170303 1.332899881 1.107982102 1.080322234 1.047139811 1.118088732 1 15.12042019 -8.717282911 0.707982373 1.002676857 1.123152358 0.114613872 0.09567146 2.318810111 2.450756124 0.10137692 0.038002762 1.92E-09 8.717282911 0.120475501 VYTDVNTHRPR ddPTM_A459_MK2206_30min_R2 2 VYTDVNTHRPR 11 1 P68400;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8Y5A0;A0A2R8YDP2;Q8NEV1;A0A2R8YF43;A0A2R8Y4H0;A0A2R8Y4D6;A0A2R8Y3W6;A0A2R8YCC9;V9GYA2;A0A2R8YEW1;A0A2R8YDY7;A0A2R8YCK2;A0A2R8YF47;V9GY80;A0A2R8YEL7;A0A2R8Y797;A0A2R8Y7T1 P68400 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 0 ; 130.41 0.0019105 5332700 24227 33540 34608 36485 33269 30778 33998 31880 35514 31674 FALSE TRUE 26081.83775 31874.45237 35761.81345 33504.05879 31962.6919 31949.27836 29534.02176 36046.82546 38602.94353 30640.47997 0.851221579 1.04027262 1.16714273 1.093457375 1.043152455 1.042714683 0.963889005 1.176444543 1.259867455 1 14.90315128 -7.780161924 24.85800375 1.163617083 1.038165044 0.218476609 0.09818683 342.0916839 454189.7784 0.053970546 0.025999272 1.66E-08 7.780161924 -0.125452039 VYTY(ph)IQSR ddPTM_A459_MK2206_30min_R1 1 VYTYIQSR 8 0 Q92630;A0A0A0MTH5;Q9NR20-5;Q9NR20-2;Q9NR20;Q92630-2;Q9NR20-3;Q9NR20-4 Q92630 DYRK2;DYRK4 Dual specificity tyrosine-phosphorylation-regulated kinase 2;Dual specificity tyrosine-phosphorylation-regulated kinase 4 1 VYT(0.005)Y(0.995)IQSR 141.52 0.03178 6473000 570.29 837.02 761.22 767.26 809.95 831.86 1017.5 614.07 551.89 596.62 TRUE FALSE 521.7838408 782.5298459 709.5505073 826.3544981 777.6879764 878.9591943 949.6244315 608.7012507 609.2609405 670.5337899 0.778161889 1.167025223 1.058187549 1.232383081 1.159804305 1.310835051 1.416221592 0.907786095 0.908620788 1 9.389166225 -7.834897771 24.99999856 0.931149096 1.165243455 0.286568808 0.159942224 55.31560873 18823.42481 0.09021192 0.043336409 1.46E-08 7.834897771 0.234094359 VYYS(ph)PPVAR ddPTM_A459_MK2206_30min_R1 2 VYYSPPVAR 9 0 O94964-2;H0YDM2;O94964;O94964-3 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 VYYS(1)PPVAR;VYYS(1)PPVAR 125.68 0.0049856 80897000 8019.6 8480.3 7879.1 7156 9275.7 8325.7 9162.9 7568.4 7262.6 6684.6 TRUE FALSE 7337.490907 7928.230929 7344.288644 7707.15636 8906.229227 8797.093939 8551.65966 7502.230277 8017.573259 7512.738714 0.976673246 1.055305027 0.977578074 1.025878398 1.185483692 1.170956994 1.138287911 0.998601251 1.067197139 1 12.87512321 -6.025148961 23.88933431 1.100035889 1.007285864 0.304888071 0.062685262 530.6657851 504086.348 0.019627321 0.025475346 9.44E-07 6.025148961 -0.092750025 VYYS(ph)PPVAR ddPTM_A459_MK2206_30min_R2 3 VYYSPPVAR 9 0 O94964-2;H0YDM2;O94964;O94964-3 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 VYYS(1)PPVAR;VYYS(1)PPVAR;VYY(0.001)S(0.999)PPVAR 96.665 0.021281 129502000 145238 165864 162296 170350 160467 162714 166594 135178 152798 150087 TRUE FALSE 156357.5329 157627.4349 167706.8676 156431.8601 154166.2593 168906.1953 144720.0077 152846.2287 166088.0938 145189.6735 1.076919103 1.085665607 1.155088124 1.077431034 1.061826613 1.163348544 0.996765157 1.052734847 1.143938752 1 17.14757932 -7.265350519 24.99215345 1.052754265 1.101856747 0.230647077 0.0489186 592.501161 3786061.023 0.019787279 0.013916857 5.43E-08 7.265350519 0.049102483 VYYTAGYNS(ph)PVK ddPTM_A459_MK2206_30min_R2 1 VYYTAGYNSPVK 12 0 Q9Y5Z4-2;Q9Y5Z4 Q9Y5Z4-2 HEBP2 Heme-binding protein 2 1 VYYTAGY(0.009)NS(0.991)PVK 89.507 0.025684 4930500 37068 51627 42470 47759 50733 47321 47822 37709 42929 52939 TRUE FALSE 39905.95458 49063.27825 43885.9286 43856.93693 48740.96751 49121.83381 41542.91396 42637.69577 46662.88682 51211.60477 0.779236557 0.958050006 0.85695281 0.856386695 0.951756301 0.95919341 0.811201175 0.832578787 0.911177985 1 15.64418315 -12.37756762 1.225284905 2.319667913 0.881635674 0.261452796 0.060616084 170617.2517 5517.703346 620932.8585 0.017498844 4.19E-13 12.37756762 -1.438032239 WADPQISESNFS(ph)PK ddPTM_A459_MK2206_30min_R1 1 WADPQISESNFSPK 14 0 D6RAW2;Q9BW91-2;Q9BW91 D6RAW2 NUDT9 "ADP-ribose pyrophosphatase, mitochondrial" 1 WADPQISESNFS(1)PK 147.07 0.00048572 6792400 1455 1923.8 1843.4 1896.9 1299.4 1173 1443.8 1346.4 1396.1 1464.7 TRUE FALSE 1331.244609 1798.56027 1718.275144 2042.999567 1247.642146 1239.414246 1347.486736 1334.628567 1541.229591 1646.158094 0.80869791 1.092580522 1.04380931 1.241071301 0.757911498 0.752913254 0.818564597 0.810753579 0.936258551 1 10.68488718 -6.282540663 24.99724053 0.830571788 1.049633379 0.390403678 0.121778366 770.2521362 912462.2245 0.037447506 0.042500212 5.22E-07 6.282540663 0.219061591 WADPQISESNFS(ph)PK ddPTM_A459_MK2206_30min_R2 1 WADPQISESNFSPK 14 0 D6RAW2;Q9BW91-2;Q9BW91 D6RAW2 NUDT9 "ADP-ribose pyrophosphatase, mitochondrial" 1 WADPQIS(0.004)ES(0.012)NFS(0.984)PK 103.79 0.0066392 2835500 12911 14371 11049 11441 14240 8453.9 12699 10941 9558.6 13847 TRUE FALSE 13899.47609 13657.35704 11417.36815 10506.2337 13680.86605 8775.619088 11031.60605 12371.02627 10389.98975 13395.17352 1.03764808 1.019572984 0.852349402 0.784329795 1.02132802 0.655132916 0.823550813 0.923543562 0.775651747 1 13.70942565 -5.253786181 5.242809283 0.84649542 1.031738434 0.31202495 0.103029296 0.184000209 17.2703156 0.025745236 0.064354884 5.57E-06 5.253786181 0.185243014 WAHDKFS(ph)GEEGEIEDDESGTENR ddPTM_A459_MK2206_30min_R1 3 WAHDKFSGEEGEIEDDESGTENR 23 1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR 88 9.46E-05 59665800 8199.4 7998.9 8164.6 5723.3 6007.4 6667.7 8481.1 6639.2 10046.3 11370.2 TRUE FALSE 7501.997973 7478.170156 7610.4097 6164.109558 5768.112537 7045.219412 7915.341294 6581.154174 11090.64884 12778.82622 0.587064715 0.585200082 0.595548415 0.482368995 0.451380466 0.551319761 0.619410669 0.515004591 0.86789261 1 13.6414677 -8.388669094 3.331917006 0.99598945 0.547517253 0.900841117 0.051891415 0.070292994 1.387963142 0.053974449 0.014444476 4.09E-09 8.388669094 -0.448472196 WAHDKFS(ph)GEEGEIEDDESGTENR ddPTM_A459_MK2206_30min_R2 5 WAHDKFSGEEGEIEDDESGTENR 23 1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(0.982)GEEGEIEDDES(0.009)GT(0.009)ENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR 88 9.46E-05 147824900 168206.7 148673.8 180957.6 184652.4 127030.8 112353.8 181907.5 144553.2 116605.8 176988.3 TRUE FALSE 181084.7343 141290.8753 186990.6361 169565.7082 122042.9325 116629.5026 158022.8267 163446.7996 126747.9617 171213.1863 1.05765647 0.825233607 1.092150903 0.990377622 0.712812694 0.681194627 0.922959441 0.954639086 0.740293224 1 17.38543429 -6.228024297 23.66494546 0.829724518 0.98668868 0.294604707 0.118007485 449.8072089 318557.86 0.035423223 0.045733247 5.92E-07 6.228024297 0.156964162 WAHDKFSGEEGEIEDDES(ph)GTENREEKDNIQPTTE ddPTM_A459_MK2206_30min_R1 2 WAHDKFSGEEGEIEDDESGTENREEKDNIQPTTE 34 3 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 WAHDKFSGEEGEIEDDES(0.667)GT(0.209)ENREEKDNIQPT(0.109)T(0.015)E;WAHDKFSGEEGEIEDDES(0.414)GT(0.414)ENREEKDNIQPT(0.162)T(0.009)E 60.541 0.00034741 13383000 1555.7 1512.39 1989.91 2031.09 1734.33 1231.08 1143.39 1428.44 837.6 802.97 TRUE FALSE 1423.379546 1413.933136 1854.840453 2187.524904 1665.247964 1300.782686 1067.116539 1415.9513 924.6715174 902.4479857 1.577242753 1.566775214 2.055343336 2.423990012 1.845256447 1.441393528 1.182468747 1.569011535 1.024625831 1 9.817699972 -6.845800283 3.219036489 1.2480135 1.919043955 0.597585251 0.271349709 0.199335835 4.130121417 0.109761397 0.097443989 1.43E-07 6.845800283 0.671030456 WCNEHLK ddPTM_A459_MK2206_30min_R1 1 WCNEHLK 7 0 P21333-2;P21333;Q60FE5;A0A087WWY3;F8WE98;Q14315-2;Q14315;O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;O75369-5;O75369-4 P21333-2;Q14315-2;O75369-8 FLNA;FLNC;FLNB Filamin-A;Filamin-C;Filamin-B 0 110.12 0.021851 17707000 6781.5 6910.6 7065.3 6893.1 7102.1 6499 6156.6 5985.8 6024.9 5549.8 FALSE TRUE 6204.697814 6460.718684 6585.727121 7424.007756 6819.208318 6866.967764 5745.904447 5933.466782 6651.209915 6237.351123 0.994764876 1.035811285 1.055853197 1.190250093 1.093285945 1.100942953 0.921209073 0.951279905 1.066351691 1 12.60671776 -7.246882563 24.94037697 0.980650157 1.081269348 0.37680739 0.058922593 839.05864 1437572.232 0.024165323 0.018634168 5.66E-08 7.246882563 0.10061919 WCNEHLK ddPTM_A459_MK2206_30min_R2 2 WCNEHLK 7 0 P21333-2;P21333;Q60FE5;A0A087WWY3;F8WE98;Q14315-2;Q14315;O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;O75369-5;O75369-4 P21333-2;Q14315-2;O75369-8 FLNA;FLNC;FLNB Filamin-A;Filamin-C;Filamin-B 0 ; 95.741 0.033151 43730000 301009 333280 324240 329910 332617 276282 358640 283555 257484 301589 FALSE TRUE 324054.4805 316729.7998 335049.9998 302955.2977 319556.7853 286796.1051 311550.1372 320616.6121 279879.4929 291748.1756 1.110733528 1.085627354 1.148421919 1.038413683 1.095317167 0.983026216 1.067873472 1.098949844 0.959318742 1 18.15436411 -6.154815702 1.430630895 1.032968145 1.110243051 0.36716577 0.046377512 0.491651578 2.022431594 0.016645682 0.025464107 7.00E-07 6.154815702 0.077274906 WCNVQSTQDEFEELTMS(ph)QK ddPTM_A459_MK2206_30min_R1 1 WCNVQSTQDEFEELTMSQK 19 0 D6RCP9;D6RFG8;P27707 D6RCP9 DCK Deoxycytidine kinase 1 WCNVQSTQDEFEELT(0.355)MS(0.645)QK 156.2 2.17E-06 3482800 2474.1 2122.3 2028.2 1592.8 1758.7 1450.8 1656.9 1695.3 1793.3 1451.7 TRUE FALSE 2263.664803 1984.137884 1890.531435 1715.477732 1688.647255 1532.943042 1546.371224 1680.478171 1979.719952 1631.547556 1.387434154 1.216107908 1.158735109 1.051442065 1.034997263 0.939563813 0.947794147 1.029990309 1.213400091 1 10.67202532 -4.948310703 0.992389795 1.020403118 1.504126843 0.709603282 0.072850682 0.875599501 0.83165917 0.026220519 0.427336606 1.13E-05 4.948310703 0.483723725 WDAADDIHR ddPTM_A459_MK2206_30min_R1 2 WDAADDIHR 9 0 Q9HD15;R4GMW4 Q9HD15 SRA1 Steroid receptor RNA activator 1 0 ; 117.7 0.007718 4079300 6599 5729.8 5540.5 4561.5 6462.7 6774.2 6629.8 5016.7 4674.3 4583.2 FALSE TRUE 6037.720397 5356.788979 5164.426297 4912.82752 6205.276974 7157.74935 6187.538139 4972.839521 5160.210212 5151.001417 1.172144969 1.039950981 1.002606266 0.953761632 1.204673901 1.389584038 1.201230137 0.965412183 1.001787768 1 12.33063722 -7.772520488 24.92848076 0.98769993 1.133939716 0.254312024 0.116506658 365.8212196 822951.4912 0.073053338 0.035615559 1.69E-08 7.772520488 0.146239786 WDEQTSNTKGDDDEES(ph)DEEAVK ddPTM_A459_MK2206_30min_R2 1 WDEQTSNTKGDDDEESDEEAVK 22 1 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 WDEQTSNTKGDDDEES(1)DEEAVK 75.718 0.00098434 8481600 55635 39394 47503 35168 33423 17821 56169 42785 22096 54379 TRUE FALSE 59894.45838 37437.75124 49086.72631 32294.6619 32110.64508 18499.19064 48793.94283 48377.1464 24017.87014 52604.61768 1.138577962 0.711681843 0.933125807 0.613913062 0.61041495 0.351664767 0.927560069 0.919636879 0.456573419 1 15.68290183 -2.185633584 1.142837903 0.701749172 199.9976301 0.250593415 0.210079712 1031.475077 3.869357812 0.063464562 535867.7952 0.006521784 2.185633584 199.2958809 WDEQTSNTKGDDDEES(ph)DEEAVKK ddPTM_A459_MK2206_30min_R2 3 WDEQTSNTKGDDDEESDEEAVKK 23 2 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 WDEQT(0.007)S(0.028)NT(0.024)KGDDDEES(0.941)DEEAVKK;WDEQT(0.003)S(0.006)NT(0.007)KGDDDEES(0.984)DEEAVKK;WDEQT(0.008)S(0.021)NT(0.018)KGDDDEES(0.953)DEEAVKK 48.616 0.022046 91272000 171032 147572 159557 121141 138066 70998 190926 138238 95257 180341 TRUE FALSE 184126.3414 140243.7891 164876.5507 111243.3928 132644.8351 73699.87864 165857.1869 156306.1812 103542.2817 174456.4879 1.055428454 0.803889788 0.945086954 0.637656954 0.760331912 0.422454215 0.950708047 0.895960839 0.593513505 1 17.41250773 -5.744405139 24.82070374 0.742138805 0.921710617 0.187146558 0.173637153 391.0331058 569771.7868 0.046614822 0.080472922 1.80E-06 5.744405139 0.179571812 WDGS(ph)EEDEDNSK ddPTM_A459_MK2206_30min_R1 8 WDGSEEDEDNSK 12 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK 269.14 1.10E-33 543667900 35992.9 41474.4 42541.1 36936.88 29972.93 26951.6 31746.2 33909.09 34446 30966.26 TRUE FALSE 32931.51485 38774.40902 39653.52866 39781.7649 28779.04473 28477.5763 29628.46892 33612.6264 38026.78497 34802.59407 0.946237363 1.114124106 1.139384282 1.143068957 0.826922403 0.818260163 0.851329325 0.965808075 1.092642258 1 15.08690722 -6.254128922 24.98613693 0.915014211 1.091568041 0.404436145 0.094392868 571.5255387 1953394.151 0.030099464 0.038079647 5.57E-07 6.254128922 0.17655383 WDGS(ph)EEDEDNSK ddPTM_A459_MK2206_30min_R2 6 WDGSEEDEDNSK 12 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 WDGS(1)EEDEDNSK;WDGS(0.999)EEDEDNS(0.001)K;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK 219.97 3.41E-08 1017265000 268056 300199 277703 270552 263680 207395 322353 235375 220222 300102 TRUE FALSE 288578.5735 285291.5542 286961.4794 248447.0361 253326.5983 215287.5621 280027.6639 266139.3207 239376.5115 290309.6963 0.994036979 0.982714521 0.988466741 0.855799993 0.87260812 0.741578958 0.964582539 0.916742789 0.824555688 1 18.14723323 -5.755274657 24.85538426 0.875963192 0.987836964 0.336551923 0.067886846 150.4130373 606438.0324 0.018390603 0.030842479 1.76E-06 5.755274657 0.111873772 WDGS(ph)EEDEDNSKK ddPTM_A459_MK2206_30min_R1 6 WDGSEEDEDNSKK 13 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(0.998)EEDEDNS(0.002)KK;WDGS(1)EEDEDNSKK 206.46 2.21E-05 395633000 17605.5 22482.6 22676.1 19862.3 13859.86 13203.73 15449.7 17422.8 18902.2 16936.3 TRUE FALSE 16108.05977 21018.97865 21136.90951 21392.09779 13307.79243 13951.31378 14419.0787 17270.4743 20867.15133 19034.49671 0.846256143 1.104257127 1.110452766 1.123859386 0.699140757 0.732948919 0.757523507 0.907324978 1.096280698 1 14.2163288 -6.246877473 24.71568757 0.848872693 1.054941874 0.291648843 0.136191903 849.5876779 1441990.667 0.042386542 0.054462879 5.66E-07 6.246877473 0.206069181 WDGS(ph)EEDEDNSKK ddPTM_A459_MK2206_30min_R2 6 WDGSEEDEDNSKK 13 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(0.999)EEDEDNS(0.001)KK;WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK 201.3 0.00017497 723933900 704865 699263 722227 600358 652918 410056 838054 576279 472065 726563 TRUE FALSE 758830.0063 664538.6162 746305.6877 551306.8309 627281.1587 425660.9684 728016.5031 651600.644 513124.3604 702855.3088 1.079639005 0.945484238 1.061819806 0.784381684 0.892475522 0.605616779 1.035798541 0.927076506 0.730056889 1 19.4228682 -5.756557033 24.99993491 0.849466043 1.020631363 0.294308463 0.124111229 157.3059313 805468.755 0.033432158 0.055641886 1.75E-06 5.756557033 0.17116532 WDKDDFES(ph)EEEDVK ddPTM_A459_MK2206_30min_R1 2 WDKDDFESEEEDVK 14 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2;Q7Z6E9-4 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK 154.82 0.0015987 69861000 7644.6 9660 10211.1 8428.5 5172.6 4981.7 6839.8 6827.5 9019.6 9580.9 TRUE FALSE 6994.386627 9031.132244 9517.998982 9077.66453 4966.564389 5263.759549 6383.529422 6767.807887 9957.219697 10767.85422 0.649561787 0.838712343 0.883927177 0.84303375 0.461239936 0.488840157 0.59283208 0.628519642 0.924717171 1 13.39444316 -10.46864428 8.744580141 0.999998903 0.696213433 0.246378347 0.156516869 4.76E-10 1.42E-10 0.167181359 0.040547435 3.40E-11 10.46864428 -0.303785471 WDKDDFES(ph)EEEDVK ddPTM_A459_MK2206_30min_R2 2 WDKDDFESEEEDVK 14 1 Q7Z6E9;A0A2R8Y880;Q7Z6E9-2;Q7Z6E9-4 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK 127.83 0.0072236 2276300 34205 30405 26728 22660 30646 19892 34981 28193 18656.3 35313 TRUE FALSE 36823.7611 28895.13191 27619.09818 20808.60551 29442.68406 20649.004 30387.95268 31877.9219 20278.99125 34160.7397 1.077955613 0.845857911 0.808504102 0.609138025 0.861886608 0.604465951 0.889557807 0.933174228 0.59363443 1 15.06005159 -2.547595161 12.90369958 0.811808375 0.919253449 0 0.161978154 0 0 0.035867858 0 0.002834033 2.547595161 0.107445074 WDQTADQT(ph)PGATPK ddPTM_A459_MK2206_30min_R1 1 WDQTADQTPGATPK 14 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDQTADQT(0.606)PGAT(0.394)PK 134.02 0.0015869 28001000 1982.9 2305.2 2175.1 1877 1964.6 1459.5 1570.8 1915.6 1759.6 1993.6 TRUE FALSE 1814.243942 2155.131061 2027.460272 2021.566865 1886.345822 1542.135629 1466.014798 1898.852111 1942.516717 2240.582219 0.80971987 0.961862074 0.904880997 0.902250695 0.841899845 0.68827451 0.654300827 0.847481559 0.866969621 1 11.12965795 -6.522249308 24.96899656 0.789057572 0.896689669 0.120726292 0.097059865 36.92753305 1464953.287 0.032140653 0.032510975 3.00E-07 6.522249308 0.107632098 WDQTADQT(ph)PGATPK ddPTM_A459_MK2206_30min_R2 2 WDQTADQTPGATPK 14 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDQTADQT(1)PGATPK;WDQTADQT(1)PGATPK 213.69 4.18E-06 185542000 151212 155658 154940 162118 151624 118264 149833 104053 92446 126921 TRUE FALSE 162788.907 147928.2501 160105.6223 148872.4408 145670.4799 122764.6194 130159.7471 117653.0844 100486.786 122779.5782 1.325863058 1.204827808 1.304008571 1.212517937 1.186439 0.999878166 1.060109092 0.958246364 0.818432409 1 16.90571109 -6.819294152 0.907002386 0.920219311 1.281480256 0.840781178 0.062361206 0.210638389 0.372478787 0.038473365 0.033540472 1.52E-07 6.819294152 0.361260945 WDQTADQTPGAT(ph)PK ddPTM_A459_MK2206_30min_R1 2 WDQTADQTPGATPK 14 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDQTADQT(0.026)PGAT(0.974)PK;WDQTADQTPGAT(1)PK 158.65 0.00071128 95721000 14127 17420.5 17788.6 14249.9 10950.4 10371 12583.1 13960.7 16807 15597.9 TRUE FALSE 12925.42447 16286.42228 16581.15939 15347.42977 10514.22238 10958.19706 11743.70436 13838.64307 18554.14779 17530.28561 0.737319674 0.929044891 0.945857915 0.875480874 0.599774734 0.625100885 0.669909471 0.78941344 1.058405334 1 14.09756188 -10.55523677 6.976489319 1.000000036 0.797808937 0.145814564 0.142203415 8.68E-08 1.20E-08 0.150434573 0.036485736 2.78E-11 10.55523677 -0.202191099 WDQTADQTPGAT(ph)PK ddPTM_A459_MK2206_30min_R2 3 WDQTADQTPGATPK 14 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDQTADQTPGAT(1)PK;WDQTADQTPGAT(1)PK;WDQT(0.001)ADQT(0.001)PGAT(0.998)PK 161.48 0.00066157 26999400 204561 208827 213852 188970 207467 162985 229229 179898 185441 245510 TRUE FALSE 220222.3474 198456.9548 220981.7189 173530.5465 199320.8031 169187.5084 199130.9569 203411.2863 201570.323 237499.0288 0.927255781 0.835611648 0.930453148 0.730657921 0.839248919 0.712371369 0.838449563 0.856472076 0.84872062 1 17.85756209 -9.072238308 1.260910115 0.999988286 0.828962747 0.3582359 0.06634548 2.965621832 5.742824368 0.064634709 0.019284882 8.47E-10 9.072238308 -0.171025538 WDS(ph)YDNFSGHR ddPTM_A459_MK2206_30min_R2 2 WDSYDNFSGHR 11 0 E9PGF5;E9PF55;A0A494C067;A0A2R8Y4T1;Q9HBL0;E7ERH1;H7C3Z4;E7EMG1;Q9HBL0-2 E9PGF5 TNS1 Tensin-1 1 WDS(1)YDNFSGHR;WDS(1)YDNFSGHR 142.45 0.0006089 7681300 36666 37095 36151 44609 35488 32968 37073 30784 25790 32901 TRUE FALSE 39473.17715 35252.91624 37356.2563 40964.302 34094.56281 34222.62034 32205.27057 34807.5745 28033.16758 31827.44306 1.240224578 1.107626402 1.17371214 1.287074866 1.071231602 1.075255096 1.011871123 1.09363402 0.880786041 1 14.95798364 -6.694573607 1.705543578 1.005737597 1.191964626 0.620125836 0.069488066 0.256220096 1.540450459 0.028348106 0.027206969 2.02E-07 6.694573607 0.186227029 WDS(ph)YENLSADGEVLHTQGPVDGSLY(ph)AK ddPTM_A459_MK2206_30min_R1 2 WDSYENLSADGEVLHTQGPVDGSLYAK 27 0 Q68CZ2;Q68CZ2-3;E9PCX8;C9JHU5 Q68CZ2;E9PCX8 TNS3 Tensin-3 2 WDS(0.485)Y(0.11)ENLS(0.396)ADGEVLHT(0.022)QGPVDGS(0.468)LY(0.52)AK;WDS(0.974)Y(0.017)ENLS(0.008)ADGEVLHT(0.075)QGPVDGS(0.161)LY(0.764)AK 77.464 0.0018939 13357900 1409.16 1309.83 1646.23 1075.91 1599.09 1223.04 1088.16 1396.21 1562.85 1213.86 TRUE FALSE 1289.303542 1224.559829 1534.488494 1158.776775 1535.394859 1292.287468 1015.570832 1384.003083 1725.31385 1364.242141 0.94506943 0.897611789 1.124791889 0.849392303 1.125456261 0.94725667 0.744421244 1.014484923 1.264668345 1 10.41388402 -8.010906044 24.93797373 1.134748366 0.950193356 0.26114775 0.123101897 640.5485116 1464682.998 0.072560789 0.031151911 9.75E-09 8.010906044 -0.184555011 WDS(ph)YENLSADGEVLHTQGPVDGSLYAK ddPTM_A459_MK2206_30min_R1 5 WDSYENLSADGEVLHTQGPVDGSLYAK 27 0 Q68CZ2;Q68CZ2-3;E9PCX8;C9JHU5 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 WDS(0.805)Y(0.002)ENLS(0.193)ADGEVLHTQGPVDGSLYAK;WDS(0.657)YENLS(0.342)ADGEVLHT(0.001)QGPVDGSLYAK;WDS(0.82)YENLS(0.18)ADGEVLHTQGPVDGSLYAK;WDS(0.977)Y(0.009)ENLS(0.014)ADGEVLHTQGPVDGSLYAK;WDS(0.96)YENLS(0.04)ADGEVLHTQGPVDGSLYAK 165.79 1.51E-21 521523400 17594.8 18480 18989.5 14947.8 16111.6 16633.8 17541.2 16490.4 18259.5 16841.6 TRUE FALSE 16098.26987 17276.94864 17700.54565 16099.08215 15469.84086 17575.59138 16371.05855 16346.22617 20157.64037 18928.06456 0.850497409 0.912768899 0.935148208 0.850540323 0.817296497 0.928546674 0.864909273 0.863597338 1.064960462 1 14.20823928 -8.257619451 24.99978648 1.03248024 0.879304122 0.72177122 0.038378718 159.8578151 1046218.306 0.02864056 0.009926879 5.53E-09 8.257619451 -0.153176118 WDS(ph)YENLSADGEVLHTQGPVDGSLYAK ddPTM_A459_MK2206_30min_R2 6 WDSYENLSADGEVLHTQGPVDGSLYAK 27 0 Q68CZ2;Q68CZ2-3;E9PCX8;C9JHU5 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 WDS(0.874)YENLS(0.125)ADGEVLHTQGPVDGSLYAK;WDS(0.587)Y(0.004)ENLS(0.408)ADGEVLHTQGPVDGSLYAK;WDS(0.925)Y(0.001)ENLS(0.073)ADGEVLHTQGPVDGSLYAK;WDS(0.326)Y(0.304)ENLS(0.326)ADGEVLHT(0.044)QGPVDGSLYAK;WDS(0.512)Y(0.243)ENLS(0.243)ADGEVLHT(0.002)QGPVDGSLYAK;WDS(0.984)Y(0.008)ENLS(0.008)ADGEVLHTQGPVDGSLYAK 120.69 5.27E-12 114884800 266010 303879.9 271395.5 280480.9 287933.1 267171.8 361392.2 246158.1 229495.8 307914.3 TRUE FALSE 286375.9301 288789.666 280443.6905 257564.7133 276627.3997 277339.2101 313940.97 278331.8089 249456.9299 297867.0816 0.961421882 0.969525281 0.941506154 0.864696803 0.928694095 0.931083786 1.053963292 0.934416141 0.837477336 1 18.18430917 -8.010254879 24.9951878 0.907808022 0.949162833 0.039541515 0.057387082 1337.808936 3260752.552 0.034948878 0.015130651 9.77E-09 8.010254879 0.041354811 WDSYENLS(ph)ADGEVLHTQGPVDGSLYAK ddPTM_A459_MK2206_30min_R1 1 WDSYENLSADGEVLHTQGPVDGSLYAK 27 0 Q68CZ2;Q68CZ2-3;E9PCX8;C9JHU5 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 WDS(0.362)Y(0.002)ENLS(0.636)ADGEVLHTQGPVDGSLYAK 87.498 3.19E-05 29451000 584.78 494.69 697.59 745.45 602.75 589.91 722.84 680.97 766.59 751.12 TRUE FALSE 535.0413902 462.4855911 650.2395344 802.8646882 578.7411912 623.3101944 674.6206625 675.0163511 846.2797738 844.1744163 0.633804318 0.547855493 0.77026681 0.951064937 0.685570636 0.738366601 0.799148434 0.799617162 1.002493984 1 9.721397297 -3.477092755 0.125568818 1.0942872 8.21E-14 0.558057415 0.096859416 45.28261804 0.636622616 0.763818641 8.347260584 0.000333355 3.477092755 -1.0942872 WDSYENLS(ph)ADGEVLHTQGPVDGSLYAK ddPTM_A459_MK2206_30min_R2 1 WDSYENLSADGEVLHTQGPVDGSLYAK 27 0 Q68CZ2;Q68CZ2-3;E9PCX8;C9JHU5 Q68CZ2;E9PCX8 TNS3 Tensin-3 1 WDS(0.166)Y(0.332)ENLS(0.501)ADGEVLHTQGPVDGSLYAK 108.77 9.97E-10 48490000 65432 82061 82784 77556 82956 64592 99026 66914 66185 78466 TRUE FALSE 70441.52423 77985.97007 85543.97724 71219.42671 79698.73062 67050.09382 86023.76725 75659.88955 71941.65166 75905.66085 0.928014109 1.02740651 1.12697757 0.938262389 1.049970842 0.883334564 1.133298443 0.996762148 0.94777716 1 16.21191986 WDVDDWDNENSSAR ddPTM_A459_MK2206_30min_R2 1 WDVDDWDNENSSAR 14 0 A0A087WUZ3;Q01082;Q01082-2;F8W6C1 A0A087WUZ3 SPTBN1 "Spectrin beta chain, non-erythrocytic 1" 0 201.38 0.00082106 3841800 10447 10055 15708 12834 10133 11023 12177 10468 8651.7 13127 FALSE TRUE 11246.83035 9555.683321 16231.69688 11785.42115 9735.127506 11442.48799 10578.14527 11836.20354 9404.209227 12698.66707 0.885670149 0.752494988 1.278220525 0.928083324 0.766625935 0.901077879 0.833012254 0.932082358 0.740566642 1 13.63238945 -6.006675216 24.98704447 0.858226216 0.975662943 0.110431654 0.141316899 670.3823731 2509432.515 0.040393299 0.057526558 9.85E-07 6.006675216 0.117436728 WEAERDDWLHNR ddPTM_A459_MK2206_30min_R1 2 WEAERDDWLHNR 12 1 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 0 ; 145.23 0.00054863 16770100 12045.6 7441.1 12020.4 10878.6 15486.1 12566.6 14161.4 10539.3 5736.7 4234.4 FALSE TRUE 11021.05847 6956.683038 11204.48874 11716.47166 14869.25584 13278.11003 13216.71884 10447.15601 6333.050494 4758.98944 2.315840076 1.461798377 2.35438403 2.461966307 3.124456575 2.790111262 2.777211215 2.195246731 1.330755316 1 12.21643954 -8.278339187 2.75662834 1.028561658 2.465521248 0.61318827 0.411559744 0.202770628 2.858069472 0.43336483 0.123305601 5.27E-09 8.278339187 1.436959591 WES(ph)QQDVSQTTVSR ddPTM_A459_MK2206_30min_R1 2 WESQQDVSQTTVSR 14 0 Q9NQT8;H0YBA8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 WES(1)QQDVSQTTVSR;WES(0.999)QQDVS(0.001)QTTVSR 233.62 1.12E-13 21106800 4495.1 4206.1 3809 3414.7 3988.5 3825.8 3910.9 4242.4 3975.8 4297.9 TRUE FALSE 4112.76814 3932.282126 3550.455692 3677.700786 3829.629599 4042.41349 3650.010997 4205.309144 4389.098638 4830.356299 0.851441982 0.814077033 0.735029773 0.761372569 0.79282549 0.836876876 0.755640116 0.870600197 0.908649045 1 12.23791389 -8.337257073 1.334828138 0.997190549 0.790524221 0.767700519 0.036726572 0.195147826 0.712096799 0.035855559 0.011132348 4.60E-09 8.337257073 -0.206666329 WES(ph)QQDVSQTTVSR ddPTM_A459_MK2206_30min_R2 2 WESQQDVSQTTVSR 14 0 Q9NQT8;H0YBA8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 WES(1)QQDVSQTTVSR;WES(1)QQDVSQTTVSR 257.35 1.25E-35 31449000 45452 51701 46077 49830 41892 34319 47908 34375 25921 43980 TRUE FALSE 48931.84007 49133.60352 47613.18418 45758.7296 40247.10959 35625.03359 41617.62205 38867.93053 28175.56173 42544.9362 1.150121364 1.154863725 1.119126938 1.075538799 0.945990597 0.837350735 0.978203889 0.9135736 0.662254177 1 15.37669981 -6.224435125 1.673287034 0.876007318 1.147954713 0.648898227 0.086913296 0.232935072 1.291437557 0.030817657 0.042583139 5.96E-07 6.224435125 0.271947395 WGDEHIPGSPYR ddPTM_A459_MK2206_30min_R1 1 WGDEHIPGSPYR 12 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 92.247 0.030813 26535000 13689 14916 15462 13629 13174 12399 13686 12658 13557 12651 FALSE TRUE 12524.67867 13944.96569 14412.48252 14678.70794 12649.25168 13101.02066 12773.03191 12547.33244 14966.29866 14218.30139 0.880884314 0.980775784 1.013657126 1.032381263 0.88964577 0.921419536 0.898351467 0.882477597 1.052608062 1 13.7954615 -3.148048498 15.25787484 0.952093904 0.424060453 0 0.064111623 0 0 0.014999162 0 0.000711134 3.148048498 -0.528033451 WGDEHIPGSPYR ddPTM_A459_MK2206_30min_R2 1 WGDEHIPGSPYR 12 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 92.112 0.031072 28899000 80615 99438 96445 99159 101750 97338 106890 70495 91116 86215 FALSE TRUE 86786.94638 94500.05352 99660.42816 91057.39251 97754.78375 101042.2658 92855.2146 79708.93855 99041.10498 83401.81161 1.040588264 1.133069554 1.194943206 1.091791542 1.172094249 1.211511643 1.113347694 0.955721908 1.18751743 1 16.3477911 -7.535726451 24.93708766 1.049878737 1.14369806 0.249516682 0.071949829 307.4341072 596714.3962 0.032422419 0.018732456 2.91E-08 7.535726451 0.093819323 WGDYDSHDIER ddPTM_A459_MK2206_30min_R1 3 WGDYDSHDIER 11 0 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 0 ;; 211.37 4.41E-28 15758100 17041.4 15631.9 16207.9 14847 16533.8 15947.3 16556.4 15851.9 14027.3 12878.1 FALSE TRUE 15591.93944 14614.26047 15107.75291 15990.51851 15875.22374 16850.22234 15451.95276 15713.30851 15485.48803 14473.53625 1.077272283 1.009722863 1.043819053 1.104810755 1.096844852 1.164209081 1.067600377 1.085657868 1.069917383 1 13.82112983 -1.906952352 15.56633989 1.075895233 1.073111057 0 0.045214848 0 0 0.010749726 0 0.012389325 1.906952352 -0.002784176 WGDYDSHDIER ddPTM_A459_MK2206_30min_R2 4 WGDYDSHDIER 11 0 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 0 ;;; 155.33 0.00074875 28452800 194659 218634 181083 231960 242054 224759 231448 182538 183175 205132 FALSE TRUE 209562.2427 207776.9535 187120.2168 213008.126 232549.7437 233312.3612 201058.5996 206396.3433 199107.2304 198438.5596 1.056056056 1.047059371 0.942962987 1.073421045 1.171897963 1.175741054 1.01320328 1.040102003 1.003369661 1 17.59833287 WGIGY(ph)HLS(ph)LHRNEMCDTEKIT(ph)SLIK ddPTM_A459_MK2206_30min_R1 1 WGIGYHLSLHRNEMCDTEKITSLIK 25 2 E5RFN6;Q8WWZ4;Q8WWZ4-2 E5RFN6 ABCA10 ATP-binding cassette sub-family A member 10 3 WGIGY(0.907)HLS(0.912)LHRNEMCDT(0.182)EKIT(0.5)S(0.5)LIK 44.105 0.033537 16363000 5071.7 4562.8 5527.4 4252.1 3830.2 3416.1 4634.6 4739 4489.6 4270.1 TRUE FALSE 4640.325282 4265.760891 5152.215488 4579.597479 3677.635023 3609.51663 4325.43429 4697.567423 4956.309986 4799.112226 0.966913267 0.888864584 1.073576788 0.954259301 0.766315696 0.752121738 0.901298842 0.978840919 1.032755592 1 12.22855184 -7.866464924 3.738821702 1.013233266 0.89781121 0.229376123 0.08836978 0.39448207 10.31760389 0.060940268 0.02709242 1.36E-08 7.866464924 -0.115422056 WGLGLDDEGSSQGEPQS(ph)KSPQESR ddPTM_A459_MK2206_30min_R1 1 WGLGLDDEGSSQGEPQSKSPQESR 24 1 Q92793-2;Q92793 Q92793-2 CREBBP CREB-binding protein 1 WGLGLDDEGS(0.004)S(0.079)QGEPQS(0.768)KS(0.063)PQES(0.085)R 68.565 0.0010884 4135900 1351.2 1613 1655.3 1327.3 1324.2 1152 1351.7 1430.1 886.18 691.18 TRUE FALSE 1236.273345 1507.993407 1542.942848 1429.528876 1271.45431 1217.225244 1261.530559 1417.596786 978.3015822 776.8085965 1.591477425 1.94126766 1.986258719 1.840258826 1.636766529 1.566956455 1.623991502 1.824898428 1.259385628 1 9.601415356 -8.837639208 0.39527038 0.919714763 1.855417865 0.705161867 0.157907875 1.111599781 0.381616765 0.327527591 0.129411975 1.45E-09 8.837639208 0.935703102 WGLGLDDEGSSQGEPQSKS(ph)PQESR ddPTM_A459_MK2206_30min_R1 1 WGLGLDDEGSSQGEPQSKSPQESR 24 1 Q92793-2;Q92793 Q92793-2 CREBBP CREB-binding protein 1 WGLGLDDEGSSQGEPQS(0.153)KS(0.812)PQES(0.035)R 107.09 2.98E-07 5014100 698.77 766.63 747.38 843.98 643.81 645.76 911.08 727.77 496.27 314.69 TRUE FALSE 639.3359421 716.7222477 696.6499279 908.9834858 618.1656844 682.3223731 850.3035156 721.4071836 547.8590424 353.676173 1.807687345 2.026492884 1.969739499 2.570101 1.747829601 1.929229123 2.404186599 2.039739283 1.549041423 1 8.466285218 -8.509592356 2.540854729 1.005652137 2.072320881 0.666594537 0.238712528 0.159085645 2.402891696 0.230110687 0.062458986 3.09E-09 8.509592356 1.066668744 WGQPPS(ph)PTPVPRPPDADPNTPSPKPLEGRPER ddPTM_A459_MK2206_30min_R2 1 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;F5GWX5;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 WGQPPS(0.461)PT(0.461)PVPRPPDADPNT(0.036)PS(0.042)PKPLEGRPER 43.992 0.017796 11073000 35153 41795 32064 38715 38290 32674 37997 28433 28841 36085 TRUE FALSE 37844.34071 39719.52108 33132.99776 35551.86066 36786.54221 33917.43197 33007.94826 32149.29073 31349.53805 34907.54941 1.084130549 1.137849026 0.949164244 1.018457648 1.053827692 0.971636008 0.945581939 0.920983892 0.898073299 1 15.09125146 -5.143379117 0.441550368 0.934009419 1.196041721 0.532035126 0.049452817 2.986564566 0.575506235 0.039697583 0.397766434 7.19E-06 5.143379117 0.262032302 WGQPPSPT(ph)PVPRPPDADPNTPSPK ddPTM_A459_MK2206_30min_R2 1 WGQPPSPTPVPRPPDADPNTPSPK 24 1 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;F5GWX5;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 WGQPPS(0.021)PT(0.862)PVPRPPDADPNT(0.087)PS(0.031)PK 59.539 0.013113 10001000 34574 29289 28304 33079 26835 26861 35041 28023 18185 36884 TRUE FALSE 37221.01202 27834.55085 29247.64123 30376.33989 25781.32306 27883.21418 30440.07461 31685.70232 19766.69843 35680.4781 1.043175821 0.780105882 0.819709903 0.85134341 0.722561032 0.781469747 0.853129673 0.888040296 0.553991972 1 15.12284733 -4.758214785 24.64783867 0.80210342 1.043176223 0.295791161 0.109855532 91.71948219 700935.4169 0.025451961 0.176918998 1.74E-05 4.758214785 0.241072803 WIDNPTVDDR ddPTM_A459_MK2206_30min_R1 2 WIDNPTVDDR 10 0 P18206;P18206-2 P18206 VCL Vinculin 0 ; 171.33 0.0024637 14347200 5688.3 4884.6 5442.4 4557.3 5486.9 5099.2 5745.8 5745.6 5084.4 4436.8 FALSE TRUE 5204.480215 4566.611652 5072.985051 4908.304036 5268.345154 5387.912297 5362.508166 5695.366825 5612.941575 4986.46428 1.043721547 0.915801537 1.017351126 0.984325518 1.056529208 1.080507549 1.075412931 1.142165371 1.125635572 1 12.2838015 -6.447906221 1.584992449 1.096397043 0.982748213 0.463302412 0.047148306 0.298131304 1.510344466 0.0175565 0.020489049 3.57E-07 6.447906221 -0.113648829 WIDNPTVDDR ddPTM_A459_MK2206_30min_R2 2 WIDNPTVDDR 10 0 P18206;P18206-2 P18206 VCL Vinculin 0 ; 209.73 0.0040672 17459000 52491 77460 71402 85141 74057 77901 79440 64203 61424 65504 FALSE TRUE 56509.75132 73613.44904 73782.50704 78184.70795 71149.15007 80865.57714 69009.43258 72594.55254 66766.54849 63366.60984 0.891790668 1.161707234 1.164375169 1.233847102 1.122817683 1.276154387 1.089050412 1.145627843 1.05365505 1 15.95143521 -10.70301852 4.673737606 0.999980026 1.135607543 0.120848375 0.099753511 2.04E-05 3.58E-06 0.094838923 0.022998431 1.98E-11 10.70301852 0.135627518 WIS(ph)ENQDSADVDPQEHSFTR ddPTM_A459_MK2206_30min_R2 2 WISENQDSADVDPQEHSFTR 20 0 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 WIS(0.519)ENQDS(0.481)ADVDPQEHSFTR;WIS(0.983)ENQDS(0.017)ADVDPQEHSFTR 107.34 0.00029794 10024600 8345.3 8285.2 11717.3 12356.7 9675.1 9989.2 14940.1 10653.6 13646.7 10958.2 TRUE FALSE 8984.222584 7873.769016 12107.94893 11347.11808 9295.206961 10369.34601 12978.44692 12046.0621 14833.6653 10600.63483 0.847517411 0.742763914 1.142190928 1.070418731 0.876853802 0.978181606 1.224308462 1.136352897 1.399318582 1 13.37186304 -7.2111849 4.905044013 1.201955064 0.943340169 0.429458099 0.13951083 0.208159067 11.33776328 0.056740191 0.042677222 6.15E-08 7.2111849 -0.258614895 WIS(ph)IMTER ddPTM_A459_MK2206_30min_R1 3 WISIMTER 8 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 WIS(0.985)IMT(0.015)ER;WIS(0.543)IMT(0.457)ER;WIS(0.952)IMT(0.048)ER 102.06 0.016528 10547000 6404.6 7340.2 7707.5 6051 5732.5 5025.4 6529.2 6326.4 6374.7 6968.5 TRUE FALSE 5859.855138 6862.351646 7184.336374 6517.049068 5504.162386 5309.933805 6093.648981 6271.088952 7037.372877 7831.810389 0.74821208 0.876215243 0.91732767 0.832125491 0.702795664 0.677995705 0.778063906 0.800720222 0.898562724 1 12.93513012 -8.492561266 2.340089395 0.99897275 0.792029041 0.485281467 0.06897695 0.284445163 3.540918829 0.076025968 0.02086571 3.22E-09 8.492561266 -0.206943709 WIS(ph)IMTER ddPTM_A459_MK2206_30min_R2 1 WISIMTER 8 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 WIS(0.995)IMT(0.005)ER 107.21 0.013401 1575500 4873.8 4302.2 4545 4466.5 4104 4719.9 5721.4 3213.3 5846 4952.3 TRUE FALSE 5246.941875 4088.559004 4696.528032 4101.572662 3942.856339 4899.519102 4970.173307 3633.289343 6354.474513 4790.706857 1.095233341 0.853435438 0.980341351 0.856151876 0.823021833 1.022713192 1.037461372 0.758403603 1.326416895 1 12.22602282 -8.262451197 24.99999959 1.163208432 0.928447038 0.362162472 0.124674591 93.56337388 2311591.414 0.094176067 0.029641763 5.46E-09 8.262451197 -0.234761394 WISIMTER ddPTM_A459_MK2206_30min_R1 1 WISIMTER 8 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 176.41 0.0021588 32850000 2365.7 3076.9 3242.3 2882 3037.5 2486.2 3067.7 2772.1 2305.6 2336 FALSE TRUE 2164.484792 2876.593251 3022.22171 3103.972139 2916.509943 2626.966495 2863.05933 2747.863822 2545.275371 2625.401316 0.824439593 1.095677538 1.151146566 1.182284827 1.110881573 1.000596168 1.090522547 1.046645252 0.969480496 1 11.35832225 -8.105109018 3.971236806 0.98583624 1.07322559 0.097417254 0.093760024 0.544777331 14.59849452 0.072534937 0.025242651 7.85E-09 8.105109018 0.08738935 WISIMTER ddPTM_A459_MK2206_30min_R2 2 WISIMTER 8 0 P07355;H0YN42;P07355-2;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 148.04 0.022485 26888000 51407 62910 54751 67825 58583 57784 61849 51368 60485 54669 FALSE TRUE 55342.75945 59785.98088 56576.37101 62283.48054 56282.73706 59983.01061 53728.15201 58081.97397 65745.87597 52885.15501 1.046470592 1.130487012 1.069796827 1.177711979 1.064244532 1.134212627 1.015940144 1.09826612 1.24318206 1 15.69057519 -10.64405432 4.735938021 0.999992645 1.106811615 0.209707765 0.063315748 4.72E-06 8.77E-07 0.058909265 0.014286612 2.27E-11 10.64405432 0.10681897 WIYEDVER ddPTM_A459_MK2206_30min_R1 1 WIYEDVER 8 0 O43852-5;O43852;O43852-3;O43852-13;O43852-14;O43852-11;O43852-10;O43852-6 O43852-5 CALU Calumenin 0 143.89 0.029408 7607400 2761.1 2556.4 2488.4 2473 3224.6 2769.2 2574.9 2509.2 2252.9 2042.1 FALSE TRUE 2526.253946 2389.977895 2319.494341 2663.470888 3096.157354 2925.989711 2403.133119 2487.262329 2487.097017 2295.090765 1.100720714 1.04134352 1.010632946 1.160507867 1.349034819 1.27489063 1.047075417 1.083731575 1.083659546 1 11.16433549 WKDSDEADLVLAK ddPTM_A459_MK2206_30min_R2 2 WKDSDEADLVLAK 13 1 Q13185 Q13185 CBX3 Chromobox protein homolog 3 0 ; 138.31 0.0028035 6424400 56480 81708 68307 76254 71703 64204 82426 57134 65539 71203 FALSE TRUE 60804.15223 77650.49953 70584.32129 70023.80428 68887.57994 66647.32821 71603.36719 64601.60997 71239.46375 68879.65194 0.882759284 1.127335829 1.024748519 1.01661089 1.000115099 0.967590955 1.039543104 0.937891063 1.034259926 1 16.07179023 -6.251128358 3.452874361 0.993805594 1.022586356 0.00695458 0.061750501 0.909094269 23.19828353 0.018518028 0.023120503 5.61E-07 6.251128358 0.028780762 WKEPGSGGPQNLS(ph)GPGGR ddPTM_A459_MK2206_30min_R1 2 WKEPGSGGPQNLSGPGGR 18 1 Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70;M0QYR7;M0R2N0;M0QZC7 Q9H0W8-2 SMG9 Protein SMG9 1 WKEPGSGGPQNLS(1)GPGGR;WKEPGSGGPQNLS(1)GPGGR 128.72 0.0018078 65459000 6780.3 6685 7045.4 6147.3 5833.6 5514.7 6342.2 5744.3 5175.1 5722.3 TRUE FALSE 6203.59988 6249.805285 6567.177878 6620.766111 5601.235359 5826.937548 5919.12341 5694.078191 5713.070164 6431.221725 0.964606749 0.971791294 1.021140019 1.029472532 0.870944215 0.906038976 0.92037309 0.885380482 0.888333572 1 12.65087711 -6.260461569 24.99853847 0.906250177 0.996711651 0.544564424 0.037833006 63.88963283 1633391.723 0.011196905 0.01362504 5.49E-07 6.260461569 0.090461474 WKEPGSGGPQNLS(ph)GPGGR ddPTM_A459_MK2206_30min_R2 4 WKEPGSGGPQNLSGPGGR 18 1 Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70;M0QYR7;M0R2N0;M0QZC7 Q9H0W8-2 SMG9 Protein SMG9 1 WKEPGSGGPQNLS(1)GPGGR;WKEPGSGGPQNLS(1)GPGGR;WKEPGSGGPQNLS(1)GPGGR;WKEPGSGGPQNLS(1)GPGGR 110.16 0.00076834 159048000 400362 433524 374296 415532 420034 370175 463085 324510 350056 428308 TRUE FALSE 431014.0225 411995.8286 386774.8418 381581.7064 403541.3547 384262.269 402281.3832 366924.5712 380503.2381 414332.345 1.040261586 0.994360767 0.933489375 0.920955631 0.973955713 0.927425227 0.970914745 0.885580321 0.918352725 1 18.66042892 -5.019899887 2.596063645 0.938165104 1.0414701 0.506263769 0.031406172 0.248618883 2.974271244 0.008146381 0.044573073 9.55E-06 5.019899887 0.103304996 WLAES(ph)PVGLPPEEEDKLTR ddPTM_A459_MK2206_30min_R1 4 WLAESPVGLPPEEEDKLTR 19 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 WLAES(1)PVGLPPEEEDKLTR;WLAES(1)PVGLPPEEEDKLTR;WLAES(1)PVGLPPEEEDKLTR;WLAES(1)PVGLPPEEEDKLTR 133.94 0.0001191 49988700 12911.7 13608 13746.1 12080.4 12165 10975.2 11026.6 11256.3 11707.9 9953.8 TRUE FALSE 11813.49211 12722.11673 12813.05303 13010.8345 11680.44229 11596.60634 10291.03563 11157.88736 12924.9781 11186.95189 1.056006339 1.137228161 1.145356944 1.163036601 1.044113035 1.036618951 0.919914176 0.997401925 1.15536191 1 13.44952938 -6.423772438 4.179894757 1.01720237 1.127287005 0.397257797 0.060444414 0.239486601 7.27519712 0.020081067 0.022631533 3.77E-07 6.423772438 0.110084635 WLAES(ph)PVGLPPEEEDKLTR ddPTM_A459_MK2206_30min_R2 4 WLAESPVGLPPEEEDKLTR 19 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 WLAES(1)PVGLPPEEEDKLTR;WLAES(1)PVGLPPEEEDKLTR;WLAES(1)PVGLPPEEEDKLTR;WLAES(1)PVGLPPEEEDKLTR 126.09 0.00020672 16165800 82123 90736 88132 89690 88648.7 77706 94339 76198.5 73002 88248 TRUE FALSE 88410.40002 86230.18218 91070.27689 82362.0401 85167.90661 80663.15628 81952.17598 86157.90558 79351.582 85368.47499 1.035632885 1.010093974 1.066790486 0.964782844 0.997650557 0.944882245 0.959981726 1.009247332 0.929518561 1 16.38141579 -5.775931236 24.99919409 0.972081309 1.034764602 0.552976403 0.026834031 165.6145533 285693.1368 0.007194044 0.010724548 1.68E-06 5.775931236 0.062683293 WLDDLLAS(ph)PPPSGGGAR ddPTM_A459_MK2206_30min_R1 5 WLDDLLASPPPSGGGAR 17 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR 247.5 2.23E-30 376524000 35313.9 33265.97 33285.2 28663.7 33845.3 30221.36 33187.57 30035.54 26402.83 25545.66 TRUE FALSE 32310.26736 31100.34931 31025.89336 30871.38314 32497.17003 31932.46729 30973.68776 29772.94244 29147.49866 28710.44922 1.125383553 1.083241473 1.080648133 1.075266461 1.131893471 1.112224579 1.078829785 1.037007196 1.015222661 1 14.80928828 -7.841697407 1.947997533 1.007285652 1.099896984 0.819723186 0.017967144 0.154194178 1.118665573 0.014840632 0.005641272 1.44E-08 7.841697407 0.092611333 WLDDLLAS(ph)PPPSGGGAR ddPTM_A459_MK2206_30min_R2 6 WLDDLLASPPPSGGGAR 17 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 WLDDLLAS(0.995)PPPS(0.005)GGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(0.989)PPPS(0.011)GGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR 239.7 1.50E-22 195385500 395028.9 483368.5 406757.5 481485.5 469719.8 456323.8 472690.1 375973.2 401839.1 407778.7 TRUE FALSE 425272.6163 459365.1232 420318.592 442146.5945 451276.2405 473689.522 410625.3221 425114.1881 436790.3386 394472.9144 1.078078116 1.164503585 1.065519524 1.120854128 1.143998039 1.200816342 1.04094681 1.077676496 1.107275868 1 18.58956672 -8.934831866 0.613511149 0.998712671 1.122397367 0.365208271 0.045353503 1.671775329 1.169387949 0.055787853 0.019468195 1.16E-09 8.934831866 0.123684696 WLDES(ph)DAEMELR ddPTM_A459_MK2206_30min_R1 13 WLDESDAEMELR 12 0 H3BPZ1;H3BS72;Q9P035 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR 288.61 7.24E-56 187826400 32445.44 30462.97 19333.95 20051.25 31863.36 31845.52 33748.96 24944.3 35373.44 26373.77 TRUE FALSE 29685.78495 28479.82512 18021.61534 21595.60075 30594.1749 33648.58582 31497.62846 24726.21461 39050.63567 29641.15174 1.001505785 0.960820462 0.607993087 0.728568206 1.032152029 1.135198326 1.062631734 0.834185353 1.317446637 1 14.85531389 -6.347910166 6.330951868 1.060829343 0.819556459 0.370682904 0.152629637 0.276394455 16.68496792 0.048988628 0.055663837 4.49E-07 6.347910166 -0.241272884 WLDES(ph)DAEMELR ddPTM_A459_MK2206_30min_R2 17 WLDESDAEMELR 12 0 H3BPZ1;H3BS72;Q9P035 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR 211.83 4.49E-06 36321140 616111.3 287895 326440.7 340364.23 267990.69 419394.6 642493.6 312629.68 386437.8 365188.26 TRUE FALSE 663281.2548 273598.5529 337324.07 312555.3836 257468.029 435354.9554 558133.4185 353491.4526 420049.4613 353272.197 1.877535964 0.774469532 0.95485598 0.884743793 0.728809205 1.232349896 1.579896248 1.000620642 1.189024964 1 18.43042069 WLEASEEER ddPTM_A459_MK2206_30min_R2 1 WLEASEEER 9 0 Q14137;Q14137-2 Q14137 BOP1 Ribosome biogenesis protein BOP1 0 161.79 0.012884 1888000 5516.9 7535 7490.5 7412.6 4994.7 10383 7499.9 6152.4 6994.4 7941.9 FALSE TRUE 5939.278106 7160.822857 7740.229531 6806.966868 4798.582982 10778.13234 6515.154121 6956.539804 7602.760269 7682.756453 0.77306604 0.932064279 1.007480789 0.886005812 0.624591318 1.40289913 0.848022993 0.905474467 0.989587567 1 12.90740831 WLHNEDQMAVEK ddPTM_A459_MK2206_30min_R1 2 WLHNEDQMAVEK 12 0 P37837 P37837 TALDO1 Transaldolase 0 ; 208.27 0.00016717 59614000 19174.6 19181.8 20255.2 18200.1 19650.2 17677.5 19455.7 18059.9 16370.2 16067.7 FALSE TRUE 17543.69958 17933.06133 18880.33346 19601.87486 18867.49092 18678.38477 18157.84575 17902.0042 18071.94087 18058.28798 0.971504032 0.99306542 1.045521784 1.08547803 1.044810612 1.034338626 1.005513135 0.991345593 1.000756046 1 14.1403735 -9.630258122 9.689280821 1 1.021090383 0.02802847 0.032040476 0 0 0.03502194 0.008494068 2.34E-10 9.630258122 0.021090383 WLHNEDQMAVEK ddPTM_A459_MK2206_30min_R2 1 WLHNEDQMAVEK 12 0 P37837 P37837 TALDO1 Transaldolase 0 136.24 0.0019997 6330400 49266 48887 33364 50348 50395 42079 48092 41252 40285 43118 FALSE TRUE 53037.84284 46459.34267 34476.33911 46234.40734 48416.23909 43680.34583 41777.46263 46643.77804 43788.91648 41711.06319 1.271553367 1.113837412 0.826551434 1.10844471 1.160752937 1.047212478 1.00159189 1.118259149 1.0498154 1 15.34814247 -4.845055354 4.217128184 1.044878117 1.27584829 0.394243709 0.086794512 0.217041038 6.454649861 0.022319795 0.12494311 1.43E-05 4.845055354 0.230970173 WLIS(ph)PVK ddPTM_A459_MK2206_30min_R1 2 WLISPVK 7 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 WLIS(1)PVK;WLIS(1)PVK 95.502 0.023749 237800000 17968.6 18427.2 17759.2 16680.6 16160.7 13634.8 16731 16123 15916.1 13841.9 TRUE FALSE 16440.27621 17227.58593 16553.75498 17965.3427 15516.9851 14406.79059 15614.90552 15982.03831 17570.63555 15556.73907 1.056794495 1.107403412 1.064089004 1.154827025 0.997444582 0.926080365 1.003738987 1.027338585 1.129454924 1 13.92525206 -6.283850047 24.85694753 1.010466507 1.094345306 0.36275452 0.052955049 850.892489 943770.9405 0.017265803 0.019592058 5.20E-07 6.283850047 0.083878799 WLIS(ph)PVK ddPTM_A459_MK2206_30min_R2 1 WLISPVK 7 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 WLIS(1)PVK 84.615 0.037299 71174000 57364 60877 58446 62631 65429 52713 78169 52903 51723 64496 TRUE FALSE 61755.83195 57853.9367 60394.56047 57513.84695 62859.92871 54719.03015 67905.3164 59817.60374 56221.77305 62391.5008 0.989811611 0.927272721 0.967993392 0.921821822 1.00750788 0.87702699 1.088374467 0.958746031 0.901112689 1 15.92906189 WLNSGRGDEASEEGQNGSS(ph)PK ddPTM_A459_MK2206_30min_R1 1 WLNSGRGDEASEEGQNGSSPK 21 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 WLNSGRGDEASEEGQNGS(0.089)S(0.911)PK 141.5 8.68E-06 12963000 1381.9 1737.1 1761.1 1499.5 1610 801.2 917.18 1840.9 1178.2 727.06 TRUE FALSE 1264.362148 1624.014474 1641.561439 1614.99175 1545.870291 846.5632516 855.9965957 1824.805205 1300.678106 817.1336818 1.547313709 1.987452617 2.008926416 1.976410697 1.891820549 1.036015612 1.047560044 2.233178299 1.591756814 1 9.67442831 -6.662141836 12.52983246 1.437998859 1.901391718 0.317095616 0.362190668 0.750049845 89.79147164 0.125803616 0.12578711 2.18E-07 6.662141836 0.463392859 WLNSGRGDEASEEGQNGSS(ph)PK ddPTM_A459_MK2206_30min_R2 2 WLNSGRGDEASEEGQNGSSPK 21 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 WLNSGRGDEASEEGQNGS(0.155)S(0.845)PK;WLNSGRGDEASEEGQNGS(0.208)S(0.792)PK 89.502 0.0077614 8116900 12799.2 30356 29876 25398 32555 19149 30546 16957.8 29575 22083 TRUE FALSE 13779.11659 28848.56518 30872.05093 23322.90216 31276.72712 19877.72861 26535.27351 19174.24268 32147.38004 21362.43352 0.645016242 1.350434404 1.445156092 1.091771784 1.464099448 0.930499262 1.242146569 0.897568279 1.504855709 1 14.38278838 -6.787430012 24.99996274 1.116557959 1.215377974 0.021860228 0.271329965 1028.029932 988837.4376 0.092228055 0.081362092 1.63E-07 6.787430012 0.098820015 WLPSS(ph)PSGVAK ddPTM_A459_MK2206_30min_R1 2 WLPSSPSGVAK 11 0 Q8IWI9;Q8IWI9-3;H3BP52;H3BTF4 Q8IWI9 MGA MAX gene-associated protein 1 WLPS(0.077)S(0.918)PS(0.005)GVAK;WLPS(0.001)S(0.999)PSGVAK 222.2 8.24E-06 112746000 16542.9 17671.6 15215.1 15156.2 13474.2 14416.2 13064.3 11608.6 12435.8 9128 TRUE FALSE 15135.83948 16521.17563 14182.3414 16323.53315 12937.49408 15232.43279 12192.80438 11507.10723 13728.54591 10258.84555 1.47539403 1.61043224 1.382450036 1.591166673 1.261106234 1.484809641 1.188516224 1.121676623 1.338215479 1 13.32458077 -7.323330315 0.321688454 0.994701466 1.614697274 0.648015859 0.114038781 0.970923924 0.273201528 0.154301114 0.216574545 4.75E-08 7.323330315 0.619995808 WLPSS(ph)PSGVAK ddPTM_A459_MK2206_30min_R2 2 WLPSSPSGVAK 11 0 Q8IWI9;Q8IWI9-3;H3BP52;H3BTF4 Q8IWI9 MGA MAX gene-associated protein 1 WLPS(0.135)S(0.862)PS(0.004)GVAK;WLPS(0.024)S(0.933)PS(0.043)GVAK 163.45 0.00063837 110001000 310310 317000 282740 346060 304180 262910 351390 254200 238180 259590 TRUE FALSE 334067.5722 301258.241 292166.4105 317785.791 292236.3648 272915.2243 305252.0709 287424.8128 258896.4659 251119.5996 1.330312619 1.199660407 1.163455226 1.265475859 1.163733796 1.086793802 1.215564502 1.144573396 1.030968775 1 17.93801511 -1.522878745 0.072498112 0.805352599 2.027215196 0.673888006 0.05497165 149.7663006 0.802398071 2.279226877 18.57299164 0.03 1.522878745 1.221862597 WMDEAQSLDTADR ddPTM_A459_MK2206_30min_R1 1 WMDEAQSLDTADR 13 0 Q6N069-3;Q6N069-2;Q6N069 Q6N069-3 NAA16 "N-alpha-acetyltransferase 16, NatA auxiliary subunit" 0 208.84 0.00012729 5492800 2070.3 1941.1 2126.9 1838.2 1836.7 2048.7 2294.1 1935 1889.6 2051.4 FALSE TRUE 1894.210113 1814.734037 1982.531954 1979.778483 1763.54035 2164.695624 2141.064775 1918.082499 2086.030682 2305.542919 0.821589612 0.787117872 0.859898091 0.858703807 0.76491326 0.938909272 0.928659691 0.831943957 0.904789351 1 11.17089081 -6.77278671 24.9995585 0.910844411 0.821243757 0.53245537 0.047487824 202.6086177 446369.0566 0.016721366 0.014875982 1.69E-07 6.77278671 -0.089600654 WNGFGRSLGLRS(ph)VLVNQHSILMGEGS(ph)Y(ph)K ddPTM_A459_MK2206_30min_R1 1 WNGFGRSLGLRSVLVNQHSILMGEGSYK 28 2 Q96K75 Q96K75 ZNF514 Zinc finger protein 514 3 WNGFGRS(0.177)LGLRS(0.813)VLVNQHS(0.105)ILMGEGS(0.954)Y(0.951)K 41.087 0.041307 35669000 366.95 256.15 520.88 352.8 381.85 309.61 330.93 282.36 259.73 222.45 TRUE FALSE 335.7389756 239.4745884 485.5241169 379.9727171 366.6401059 327.1398506 308.8542635 279.8913563 286.729863 250.0087854 1.34290871 0.957864693 1.942028221 1.519837459 1.466508888 1.308513419 1.235373641 1.119526083 1.146879149 1 7.965834982 -7.349722752 1.420218667 1.085725538 1.448294396 0.317452257 0.227347195 0.578923346 2.258199433 0.152230788 0.082983664 4.47E-08 7.349722752 0.362568858 WNS(ph)FQLSHQPR ddPTM_A459_MK2206_30min_R2 1 WNSFQLSHQPR 11 0 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 WNS(1)FQLSHQPR 97.203 0.012881 4148200 21206 24956 18099 20117 22426 17023 19607 15375 19475 20563 TRUE FALSE 22829.54766 23716.72133 18702.41163 18473.37675 21545.44256 17670.82219 17032.57735 17384.56529 21168.9003 19892.03099 1.147673039 1.19227249 0.940196184 0.928682283 1.083119294 0.888336751 0.856251297 0.87394622 1.064189992 1 14.27990296 -5.263766426 24.94412479 0.947660777 1.169972779 0.58103582 0.073066267 125.5126906 1345416.735 0.019588375 0.044191367 5.45E-06 5.263766426 0.222312001 WNS(ph)NDFIDAFASPVEAEGTPEPGAEAAK ddPTM_A459_MK2206_30min_R2 1 WNSNDFIDAFASPVEAEGTPEPGAEAAK 28 0 O00562-2;O00562 O00562-2 PITPNM1 Membrane-associated phosphatidylinositol transfer protein 1 1 WNS(1)NDFIDAFASPVEAEGTPEPGAEAAK 125.32 2.45E-12 2115900 15794 20934 18093 23042 21301 15262 22855 18549 19434 23563 TRUE FALSE 17003.20078 19894.448 18696.21159 21159.39489 20464.61571 15842.8061 19854.11105 20973.41799 21124.33419 22794.14124 0.745946101 0.872787783 0.820220047 0.92828217 0.897801566 0.695038516 0.871018164 0.920123192 0.926744025 1 14.47637544 -8.043810603 1.62657557 0.978069889 0.834469562 0.406524589 0.06682347 0.424395777 2.007187654 0.0613882 0.019965334 9.04E-09 8.043810603 -0.143600327 WNSVS(ph)PASAGK ddPTM_A459_MK2206_30min_R2 1 WNSVSPASAGK 11 0 E5RJU9;Q86UE4;H0YB56;H0YBE0 E5RJU9 MTDH Protein LYRIC 1 WNS(0.005)VS(0.976)PAS(0.019)AGK 106.76 0.009709 0 55206 29495 26796 34210 25109 31537 55167 22697 24570 24518 TRUE FALSE 59432.61381 28030.32119 27689.36527 31414.93357 24123.0945 32737.16263 47923.50663 25663.57583 26707.05419 23717.97967 2.505804231 1.181817405 1.167441985 1.324519795 1.017080495 1.380267759 2.020556021 1.082030434 1.12602568 1 14.5336935 -4.758716443 24.99756082 1.277847297 2.505805872 0.638995792 0.281476164 50.36804956 462307.9331 0.072546595 0.485888027 1.74E-05 4.758716443 1.227958574 WPCTS(ph)PR ddPTM_A459_MK2206_30min_R1 1 WPCTSPR 7 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 WPCT(0.002)S(0.998)PR 84.743 0.037131 14077000 7563 7427.8 6581.8 5896.3 7246.5 6641 7316.1 6434.5 5528.8 5459.2 TRUE FALSE 6919.727135 6944.24887 6135.045754 6350.434048 6957.85656 7017.007681 6828.056318 6378.243845 6103.538545 6135.526911 1.12781302 1.1318097 0.999921579 1.03502668 1.134027552 1.143668308 1.112872035 1.039559265 0.99478637 1 12.58297153 -7.966296062 3.627322213 1.000520692 1.095954166 0.463220214 0.044024571 0.239790234 6.573051194 0.032928184 0.013289186 1.08E-08 7.966296062 0.095433475 WPCTS(ph)PR ddPTM_A459_MK2206_30min_R2 1 WPCTSPR 7 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5;Q9Y4B5-4 MTCL1 Microtubule cross-linking factor 1 1 WPCT(0.029)S(0.971)PR 82.75 0.040577 8090300 53757 68501 64281 65854 75345 69963 76747 50077 67514 63259 TRUE FALSE 57872.67725 65099.33995 66424.09646 60473.51754 72386.57672 72625.49099 66670.02671 56622.23584 73386.24568 61194.86401 0.945711347 1.063803981 1.085452146 0.988212304 1.182886471 1.186790626 1.089470951 0.925277583 1.199222302 1 15.90112295 -3.85116982 1.237132678 1.086326131 3.41E-09 0.178898361 0.086729884 22.28027395 5.074459851 0.025755824 53.17417944 0.000140874 3.85116982 -1.086326127 WPQGAVPQLPPSAPATSEMT(ph)TTPERPR ddPTM_A459_MK2206_30min_R2 1 WPQGAVPQLPPSAPATSEMTTTPERPR 27 1 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 WPQGAVPQLPPS(0.003)APAT(0.283)S(0.105)EMT(0.399)T(0.105)T(0.105)PERPR 79.589 0.00015055 8640900 30240 37612 34258 44220 40329 38330 41289 26379 33043 43151 TRUE FALSE 32555.19765 35744.24277 35400.14462 40607.08455 38745.48082 39788.67501 35867.7047 29826.82587 35917.02041 41742.9864 0.779896228 0.856293376 0.84805012 0.972788199 0.928191396 0.953182281 0.859251045 0.714535026 0.860432458 1 15.3492462 WQELS(ph)PETSGK ddPTM_A459_MK2206_30min_R2 1 WQELSPETSGK 11 0 Q9NWF9-3;Q9NWF9;Q9NWF9-1 Q9NWF9-3 RNF216 E3 ubiquitin-protein ligase RNF216 1 WQELS(0.944)PET(0.048)S(0.008)GK 100.11 0.016588 2965000 19301 20333 22587 25526 20012 20548 20442 19325 19249 22515 TRUE FALSE 20778.6994 19323.29279 23340.03931 23440.44415 19226.22833 21329.96854 17757.94084 21850.84385 20923.24323 21780.33739 0.954011824 0.887189782 1.071610549 1.076220433 0.882733264 0.979322228 0.815319824 1.003237161 0.96064826 1 14.41073868 -6.279668764 24.9433525 0.936083078 0.994707021 0.124000974 0.07367003 1800.090344 2463065.71 0.023658757 0.026874931 5.25E-07 6.279668764 0.058623944 WQRPS(ph)SPPPFLPAASEEAEPAEGLR ddPTM_A459_MK2206_30min_R1 4 WQRPSSPPPFLPAASEEAEPAEGLR 25 1 H3BLU1;Q4KMQ1;Q4KMQ1-2;Q4KMQ1-4;Q4KMQ1-3 H3BLU1 TPRN Taperin 1 WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLR;WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLR;WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLR;WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLR 139.16 1.53E-08 80164100 5971.4 5914.5 6203.3 5027.52 6791.6 6317.25 6482.95 6254.9 5157.24 4460.47 TRUE FALSE 5463.501073 5529.464975 5782.237279 5414.740462 6521.076191 6674.927236 6050.484234 6200.214069 5693.353553 5013.066698 1.089852061 1.103010454 1.153433143 1.080125358 1.300815765 1.33150577 1.206942696 1.236810608 1.135702734 1 12.29147771 -6.244130073 24.80183641 1.220529593 1.109693327 0.201228329 0.088468037 1030.998252 1477276.994 0.025595424 0.032965506 5.70E-07 6.244130073 -0.110836266 WQRPS(ph)SPPPFLPAASEEAEPAEGLR ddPTM_A459_MK2206_30min_R2 3 WQRPSSPPPFLPAASEEAEPAEGLR 25 1 H3BLU1;Q4KMQ1;Q4KMQ1-2;Q4KMQ1-4;Q4KMQ1-3 H3BLU1 TPRN Taperin 1 WQRPS(0.494)S(0.494)PPPFLPAAS(0.012)EEAEPAEGLR;WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLR;WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLR 171.42 1.32E-16 35806000 35321.7 41671.1 37837.4 46498.1 43929 48671.4 40812.5 37340.6 40706 45462.2 TRUE FALSE 38025.95651 39601.77377 39098.88003 42699.05649 42204.12673 50523.62423 35453.76973 42221.14463 44246.5343 43978.77214 0.864643433 0.900474748 0.889039828 0.970901515 0.959647682 1.148818436 0.806156425 0.960034639 1.006088441 1 15.42451971 -5.766743913 4.620329706 0.976868092 0.884990349 0.232785462 0.078317902 0.30559531 16.3164871 0.022286565 0.036576259 1.71E-06 5.766743913 -0.091877743 WQS(ph)PVTK ddPTM_A459_MK2206_30min_R1 4 WQSPVTK 7 0 A9Z1X7;M0R088 A9Z1X7 SRRM1 1 WQS(0.807)PVT(0.193)K;WQS(0.835)PVT(0.165)K;WQS(0.595)PVT(0.405)K;WQS(1)PVTK 99.815 0.020969 1131004000 32455.8 34091.4 32875.4 28046.9 29933.6 26778.9 31764.6 29980.8 27968.5 24566.8 TRUE FALSE 29695.26378 31872.04366 30643.90944 30207.0771 28741.28133 28295.09818 29645.64149 29718.68103 30875.92566 27610.32065 1.07551318 1.154352536 1.109871552 1.09405021 1.040961519 1.024801506 1.073715944 1.076361314 1.118274795 1 14.75292002 -1.522906285 0.010078341 1.07E-06 2.300237629 0.33136275 0.035665036 15409.96816 12.05219195 1184.150165 1594.850426 0.029998098 1.522906285 2.300236555 WQS(ph)PVTK ddPTM_A459_MK2206_30min_R2 5 WQSPVTK 7 0 A9Z1X7;M0R088 A9Z1X7 SRRM1 1 WQS(0.992)PVT(0.008)K;WQS(0.999)PVT(0.001)K;WQS(1)PVTK;WQS(1)PVTK;WQS(0.995)PVT(0.005)K 93.556 0.025554 1063562000 1096789 1289420 1137090 1249260 1186506 933117 1248590 1008530 1000535 1112405 TRUE FALSE 1180760.009 1225389.278 1175000.013 1147191.462 1139917.813 968627.4213 1084648.633 1140348.334 1087559.726 1076107.316 1.097251168 1.138724047 1.091898545 1.066056744 1.059297522 0.900121584 1.007937236 1.059697594 1.010642442 1 20.03739053 -6.172196371 1.882177122 1.001043945 1.111672009 0.573710473 0.041351727 0.267207023 1.866298464 0.014976882 0.021061462 6.73E-07 6.172196371 0.110628064 WREEER ddPTM_A459_MK2206_30min_R1 1 WREEER 6 1 Q9NXE8;Q9NXE8-2 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 0 141.98 0.028388 1742400 1506.4 1300.2 1129.1 1426.3 938.19 1149.5 1472.1 1550.3 128.32 660.38 FALSE TRUE 1378.27277 1215.556744 1052.459838 1536.153873 900.8199056 1214.583697 1373.898895 1536.745891 141.6593232 742.19286 1.857027794 1.637790942 1.418040909 2.069750271 1.213727528 1.636479899 1.851134616 2.070547931 0.19086592 1 9.535650312 -8.260277251 24.99999992 0.59543292 1.703014135 0.675035557 0.311749553 56.15658811 1208128.288 0.230851619 0.076025257 5.49E-09 8.260277251 1.107581216 WREEQMER ddPTM_A459_MK2206_30min_R1 5 WREEQMER 8 1 P09496-2;F8WF69;P09496-4;P09496-3;P09496 P09496-2 CLTA Clathrin light chain A 0 ;;;; 141.52 0.0064051 134287100 14519.1 14333.3 14175.7 11893.6 16142.3 14110.8 15505.3 14045.2 11217.6 9782 FALSE TRUE 13284.1743 13400.19956 13213.49298 12809.64713 15499.31801 14909.7413 14470.96973 13922.4043 12383.70966 10993.86801 1.208325795 1.218879429 1.201896636 1.1651629 1.409814816 1.356187039 1.316276466 1.266379066 1.126419714 1 13.42441144 -8.480643924 2.603950743 1.001596139 1.270404515 0.592346146 0.07171034 0.199875269 3.037623116 0.077414077 0.02099769 3.31E-09 8.480643924 0.268808375 WREEQMER ddPTM_A459_MK2206_30min_R2 4 WREEQMER 8 1 P09496-2;F8WF69;P09496-4;P09496-3;P09496 P09496-2 CLTA Clathrin light chain A 0 ;;; 123.21 0.016978 87580200 204804 266111 209474 262357 259618 269738 248029 221926 236844 231745 FALSE TRUE 220483.9517 252896.3147 216457.7586 240921.5939 249424.0928 280003.0686 215462.4944 250932.4902 257444.263 224183.1796 0.983499084 1.1280789 0.965539694 1.074664006 1.112590576 1.248992315 0.96110018 1.11931899 1.148365651 1 17.77431851 -4.746078652 24.48708344 1.086192393 0.983498722 0.112768658 0.084667123 1552.868331 2475304.708 0.020856524 0.484932084 1.79E-05 4.746078652 -0.102693671 WRPEDAEEAEHR ddPTM_A459_MK2206_30min_R1 2 WRPEDAEEAEHR 12 1 E7EUV9;F8W8D3;Q14493;H0YAE8 E7EUV9 SLBP Histone RNA hairpin-binding protein 0 ; 162.93 0.00039506 7576200 5079.3 5741 6105.1 5671.4 6081.8 6340 6158.4 5505 4378.3 3982.9 FALSE TRUE 4647.278863 5367.259857 5690.702822 6108.212211 5839.549028 6698.965321 5747.584373 5456.870365 4833.439953 4476.331721 1.038189114 1.199030856 1.271287111 1.364557542 1.304538937 1.496530136 1.283994291 1.219049594 1.079776981 1 12.12810124 -8.273761032 2.122470452 1.005140849 1.287949766 0.431976008 0.109858682 0.311911978 2.591315008 0.111073997 0.032175696 5.32E-09 8.273761032 0.282808917 WRPHS(ph)PDGPR ddPTM_A459_MK2206_30min_R1 1 WRPHSPDGPR 10 1 Q6Y7W6;I1E4Y6;Q6Y7W6-3;C9IYH5;C9JH78 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 WRPHS(1)PDGPR 82.774 0.022982 30277000 4734.3 4558.9 4717.8 4271.2 4776.8 4171.7 5062.6 4207.8 3886.1 2984.8 TRUE FALSE 4331.622924 4262.114781 4397.568881 4600.168564 4586.529941 4407.898049 4724.883191 4171.011648 4290.074002 3354.579558 1.291256579 1.270536205 1.310915065 1.371310021 1.367244348 1.31399419 1.408487445 1.243378366 1.278870847 1 11.71191624 -9.005616439 1.107412021 1.000016245 1.32916737 0.819373906 0.045420418 0.75278257 1.316553043 0.045566566 0.014070697 9.87E-10 9.005616439 0.329151125 WRPHS(ph)PDGPR ddPTM_A459_MK2206_30min_R2 3 WRPHSPDGPR 10 1 Q6Y7W6;I1E4Y6;Q6Y7W6-3;C9IYH5;C9JH78 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR 68.626 0.042906 273939000 60567.4 80808.2 63042.9 87979 85129 82208 72378.2 53320.7 65235.5 74466.9 TRUE FALSE 65204.48671 76795.38229 65144.71882 80790.83427 81786.40772 85336.48305 62874.8554 60289.89857 70909.56587 72037.05115 0.90515208 1.066053941 0.904322398 1.121517788 1.135338085 1.184619327 0.872812732 0.836929019 0.984348536 1 16.13645151 -7.288646826 24.97792096 0.909933309 1.053556522 0.296871991 0.096588053 921.2417172 845746.5223 0.042114663 0.028401822 5.14E-08 7.288646826 0.143623213 WRS(ph)LQQLAEER ddPTM_A459_MK2206_30min_R1 2 WRSLQQLAEER 11 1 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 1 WRS(1)LQQLAEER;WRS(1)LQQLAEER 74.649 0.030123 8174900 2802.9 2586.1 2633.6 2506.6 3096.2 2546.8 2397.2 2487.3 1884.75 1578.27 TRUE FALSE 2564.498636 2417.74442 2454.83857 2699.658766 2972.871798 2690.997615 2237.287162 2465.553798 2080.676507 1773.798003 1.445767011 1.363032553 1.383944827 1.521965163 1.675992302 1.517082334 1.261297599 1.389985666 1.173006455 1 10.79262601 -8.320136217 1.003846598 1.003188771 1.474519638 0.70416994 0.099127767 0.315268314 0.672560281 0.104799474 0.035869817 4.78E-09 8.320136217 0.471330867 WRS(ph)LQQLAEER ddPTM_A459_MK2206_30min_R2 1 WRSLQQLAEER 11 1 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" 1 WRS(1)LQQLAEER 70.272 0.036702 3685500 5965.5 9256.3 7736.8 8830.3 9423.5 7696.9 7850.5 6053.4 9068.3 8157 TRUE FALSE 6422.223267 8796.645602 7994.741051 8108.836243 9053.486041 7989.810923 6819.71992 6844.600164 9857.044342 7890.837758 0.813883578 1.114792354 1.013167587 1.027626786 1.147341552 1.012542796 0.864258033 0.867411088 1.249175898 1 12.94596276 -4.745799333 24.92010088 1.025665498 0.813882971 0.254965037 0.111710953 1315.239946 2095520.772 0.028223794 0.687294307 1.80E-05 4.745799333 -0.211782527 WS(ph)DQGPAQTSR ddPTM_A459_MK2206_30min_R2 4 WSDQGPAQTSR 11 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 WS(0.993)DQGPAQT(0.007)SR;WS(0.999)DQGPAQT(0.001)SR;WS(1)DQGPAQTSR;WS(1)DQGPAQTSR 143.58 0.00082779 70780000 309658 266108 231153 272058 326137 274597 392498 262739 300177 309841 TRUE FALSE 333365.6546 252893.4637 238859.5257 249829.9911 313331.2227 285046.9813 340962.5411 297079.8894 326285.8529 299730.9135 1.112216457 0.843735004 0.796913214 0.833514262 1.045375063 0.951009617 1.137562146 0.99115532 1.088595931 1 18.19330836 -6.271775629 24.63280131 1.036041074 0.885698931 0.344439052 0.093475672 632.5075892 1507355.536 0.029077736 0.033347021 5.35E-07 6.271775629 -0.150342144 WS(ph)GNEPTDEFSDLPLR ddPTM_A459_MK2206_30min_R1 2 WSGNEPTDEFSDLPLR 16 0 Q96II8-3;Q96II8;Q96II8-2;E9PD99;Q96II8-4 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 WS(0.835)GNEPT(0.074)DEFS(0.09)DLPLR;WS(0.971)GNEPT(0.029)DEFSDLPLR 239.93 1.95E-21 25666000 2588.42 2657.33 2829.7 2087.12 2339.19 2278.24 3062.2 2510.02 2797.41 2647.87 TRUE FALSE 2368.261287 2484.337334 2637.627848 2247.870344 2246.015109 2407.23198 2857.926225 2488.07516 3088.21078 2975.908126 0.795811291 0.834816543 0.886327042 0.755356096 0.754732678 0.808906686 0.96035432 0.836072572 1.037737272 1 11.53911427 -7.857209207 1.06067794 1.010597818 0.807979989 0.626178928 0.058462999 0.357885801 0.728766113 0.053302457 0.020376379 1.39E-08 7.857209207 -0.202617829 WS(ph)GNEPTDEFSDLPLR ddPTM_A459_MK2206_30min_R2 2 WSGNEPTDEFSDLPLR 16 0 Q96II8-3;Q96II8;Q96II8-2;E9PD99;Q96II8-4 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 WS(1)GNEPTDEFSDLPLR;WS(0.967)GNEPT(0.033)DEFSDLPLR 119.51 0.0016778 3082200 14990.4 17476.6 19285.6 17606.5 15877.8 17983.6 21004.5 14852.6 14052.2 18896.5 TRUE FALSE 16138.07655 16608.73746 19928.57228 16167.99263 15254.35779 18667.9785 18246.58392 16793.88582 15274.43496 18279.90875 0.882831352 0.908578794 1.090189921 0.884467907 0.834487633 1.021229304 0.998176969 0.918707311 0.835585952 1 14.15797125 WS(ph)IPADGR ddPTM_A459_MK2206_30min_R2 1 WSIPADGR 8 0 P55040;E5RJF9 P55040 GEM GTP-binding protein GEM 1 WS(1)IPADGR 96.665 0.020894 3365000 14589 19107 26207 20455 18447 22445 22331 15329 21710 21863 TRUE FALSE 15705.94506 18158.17416 27080.7283 18783.76107 17722.67809 23299.1602 19398.91288 17332.55293 23598.29656 21149.6121 0.742611495 0.85855826 1.280436169 0.888137379 0.837967051 1.101635344 0.917223105 0.819521079 1.115779166 1 14.36834358 -5.006754437 24.66776168 0.986185873 0.771598008 0.265628569 0.134852746 355.3657747 1297871.878 0.0335682 0.113131654 9.85E-06 5.006754437 -0.214587865 WS(ph)PPQNYK ddPTM_A459_MK2206_30min_R1 1 WSPPQNYK 8 0 H3BRF9;Q96K21-3;Q96K21-2;Q96K21;H3BRM1 H3BRF9 ZFYVE19 Abscission/NoCut checkpoint regulator 1 WS(1)PPQNYK 89.827 0.029123 57437000 4994.9 5483.1 5106.6 4497.4 4289.9 4029.2 5286.4 4326.1 4626.1 3816.8 TRUE FALSE 4570.057526 5126.149193 4759.97822 4843.790527 4119.024199 4257.329822 4933.753902 4288.277364 5106.99965 4289.653999 1.065367399 1.195002952 1.109641528 1.129179773 0.960222946 0.992464619 1.150151948 0.99967908 1.190538829 1 12.06664557 -6.110521163 24.65048331 1.050492964 1.128750694 0.200300972 0.07413812 35.85151036 7958.971955 0.021407886 0.027637466 7.75E-07 6.110521163 0.07825773 WS(ph)PPQNYK ddPTM_A459_MK2206_30min_R2 1 WSPPQNYK 8 0 H3BRF9;Q96K21-3;Q96K21-2;Q96K21;H3BRM1 H3BRF9 ZFYVE19 Abscission/NoCut checkpoint regulator 1 WS(1)PPQNYK 93.667 0.023742 36435000 67105 77318 66262 71120 74533 62707 83763 60123 53420 76780 TRUE FALSE 72242.61039 73478.50055 68471.14201 65309.2685 71606.45992 65093.35883 72764.81748 67981.28253 58066.37504 74274.67489 0.97264122 0.989280676 0.921863907 0.879293899 0.964076383 0.876386991 0.979671976 0.915268665 0.781778919 1 16.18058276 -5.311802964 5.461674016 0.912816389 0.981052088 0.168849346 0.058744809 0.315924558 22.12154902 0.014990079 0.032885903 4.88E-06 5.311802964 0.068235699 WS(ph)TPTKDCTSGPYTAQIIPGTGNK ddPTM_A459_MK2206_30min_R1 1 WSTPTKDCTSGPYTAQIIPGTGNK 24 1 P51587 P51587 BRCA2 Breast cancer type 2 susceptibility protein 1 WS(0.372)T(0.31)PT(0.31)KDCT(0.002)S(0.002)GPY(0.002)T(0.002)AQIIPGTGNK 90.464 2.96E-05 9457200 2040.6 2224.8 2338.4 2151.4 1978.5 1610 2085.4 2274.7 1686.6 1599.6 TRUE FALSE 1867.036254 2079.965116 2179.675923 2317.101201 1899.692155 1701.156809 1946.286771 2254.812538 1861.928106 1797.770524 1.038528683 1.156969195 1.212432785 1.288874842 1.056693349 0.94625915 1.082611348 1.254227115 1.035687303 1 10.81199317 -6.323202308 24.99931692 1.070476542 1.175702027 0.248997605 0.094357515 379.4926988 153603.3733 0.0313519 0.035549718 4.75E-07 6.323202308 0.105225485 WS(ph)TTAGFLK ddPTM_A459_MK2206_30min_R1 2 WSTTAGFLK 9 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 WS(0.51)T(0.148)T(0.342)AGFLK;WS(0.77)T(0.115)T(0.115)AGFLK 129.88 0.0039781 140459000 8453.2 11150.6 9752.1 7981.7 8852.6 9373.6 10590.4 7948.3 10650.3 10412.2 TRUE FALSE 7734.21095 10424.69391 9090.154623 8596.451917 8499.982196 9904.325131 9883.933739 7878.808851 11757.4368 11702.14194 0.660922674 0.890836392 0.776794083 0.734604994 0.726361228 0.846368569 0.844626034 0.673279207 1.004725191 1 13.514485 -8.278121361 24.81808019 1.002362691 0.776032363 0.630098078 0.071299291 537.0133354 798915.7954 0.065842015 0.017190449 5.27E-09 8.278121361 -0.226330327 WS(ph)TTAGFLK ddPTM_A459_MK2206_30min_R2 2 WSTTAGFLK 9 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5;Q8TEW0-8;Q8TEW0-9;Q5VWU8;Q8TEW0-10 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 WS(0.826)T(0.014)T(0.16)AGFLK;WS(0.871)T(0.127)T(0.002)AGFLK 132.32 0.0033917 100934000 167642 154118 158209 153378 141708 131834 175016 124370 122218 156836 TRUE FALSE 180476.8004 146464.7242 163483.6091 140846.5268 136143.8319 136851.0353 152036.189 140625.586 132848.3007 151718.4542 1.189550747 0.965371846 1.077545972 0.92834143 0.897345235 0.902006523 1.00209424 0.926885176 0.875623875 1 17.21103705 -1.522878745 0.731840964 0.933169944 38.29770003 0.616661504 0.05664525 225.8997086 1.052007539 0.02132851 13880.89037 0.03 1.522878745 37.36453008 WSAEASGKPSPSDPGSGTATMMNSS(ph)SR ddPTM_A459_MK2206_30min_R1 2 WSAEASGKPSPSDPGSGTATMMNSSSR 27 1 Q5JRA6-4;Q5JRA6-2;Q5JRA6 Q5JRA6-4 MIA3 Melanoma inhibitory activity protein 3 1 WSAEASGKPSPSDPGS(0.012)GT(0.012)AT(0.051)MMNS(0.06)S(0.498)S(0.367)R;WSAEASGKPSPSDPGS(0.002)GT(0.02)AT(0.099)MMNS(0.064)S(0.475)S(0.341)R 84.736 3.65E-05 30857000 5366 5424.6 5102.5 3987.8 5622.4 5351 6884.9 5013.6 5907.1 6259.5 TRUE FALSE 4909.593522 5071.457554 4756.156516 4294.941047 5398.447902 5653.968996 6425.620883 4969.766624 6521.164184 7034.974117 0.697883665 0.720892141 0.676073065 0.610512701 0.767372817 0.803694356 0.913382306 0.706437087 0.926963493 1 12.7803294 -6.685726954 2.246324318 0.86078831 0.68020718 0.582665578 0.077422372 0.236515387 2.444825353 0.028417313 0.027516683 2.06E-07 6.685726954 -0.18058113 WSAEASGKPSPSDPGSGTATMMNSS(ph)SR ddPTM_A459_MK2206_30min_R2 4 WSAEASGKPSPSDPGSGTATMMNSSSR 27 1 Q5JRA6-4;Q5JRA6-2;Q5JRA6 Q5JRA6-4 MIA3 Melanoma inhibitory activity protein 3 1 WSAEASGKPSPSDPGS(0.001)GT(0.002)AT(0.007)MMNS(0.032)S(0.559)S(0.4)R;WSAEASGKPSPSDPGS(0.001)GTAT(0.001)MMNS(0.033)S(0.523)S(0.44)R;WSAEASGKPSPSDPGS(0.007)GT(0.007)AT(0.036)MMNS(0.203)S(0.415)S(0.332)R;WSAEASGKPSPSDPGS(0.024)GT(0.103)AT(0.018)MMNS(0.107)S(0.645)S(0.103)R 86.771 2.92E-05 37754200 211968 160595 167016 175013 148935 173308 190883 125039 138287 180795 TRUE FALSE 228196.4331 152620.0858 172584.2301 160713.8781 143087.0636 179903.3574 165819.8328 141382.0266 150314.9533 174895.674 1.304757447 0.872634996 0.986783871 0.918912826 0.818128089 1.028632403 0.948107115 0.808379209 0.859454953 1 17.41613508 -4.757797071 24.99991678 0.913501358 1.304758001 0.723431794 0.072161049 55.87683269 383467.9511 0.018150955 0.130952296 1.75E-05 4.757797071 0.391256643 WSAEASGKPSPSDPGSGTATMMNSSS(ph)R ddPTM_A459_MK2206_30min_R2 2 WSAEASGKPSPSDPGSGTATMMNSSSR 27 1 Q5JRA6-4;Q5JRA6-2;Q5JRA6 Q5JRA6-4 MIA3 Melanoma inhibitory activity protein 3 1 WSAEASGKPSPSDPGSGTAT(0.001)MMNS(0.071)S(0.122)S(0.806)R;WSAEASGKPSPSDPGSGTATMMNS(0.016)S(0.131)S(0.853)R 111.84 3.98E-10 20994200 153773 115769 130906 139756 119544 130034 162056 99063 111025 140060 TRUE FALSE 165545.9791 110020.0798 135270.3407 128337.4877 114850.1019 134982.535 140777.8525 112010.8742 120681.7538 135489.8537 1.221833035 0.812017113 0.998379857 0.947211059 0.847665702 0.99625567 1.039028744 0.826710423 0.890706946 1 17.04782529 -4.746716261 24.96966234 0.929036819 1.221833812 0.567105551 0.076841333 589.1161741 999054.462 0.018947191 0.42013167 1.79E-05 4.746716261 0.292796993 WSEPWVPVEALPPS(ph)PLELSR ddPTM_A459_MK2206_30min_R2 2 WSEPWVPVEALPPSPLELSR 20 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 WSEPWVPVEALPPS(0.998)PLELS(0.002)R;WSEPWVPVEALPPS(1)PLELSR 298.42 1.91E-175 0 49026 65372 55975 62200 64367 54899 57911 47149 50494 52372 TRUE FALSE 52779.46825 62125.72154 57841.17856 57118.06103 61839.62816 56988.21991 50307.21614 53311.53619 54885.87685 50663.10593 1.041773245 1.226251735 1.141682443 1.127409384 1.220604758 1.12484655 0.992975366 1.052275324 1.083350021 1 15.6286479 -7.102105241 5.451280229 1.037400483 1.155511873 0.525193007 0.053807823 0.180776297 7.859993022 0.019978662 0.015464862 7.90E-08 7.102105241 0.11811139 WSLQSEAHR ddPTM_A459_MK2206_30min_R1 1 WSLQSEAHR 9 0 Q16658 Q16658 FSCN1 Fascin 0 147.4 0.0023076 9493900 5412.4 3093 4700.7 3764.3 6093.1 6263.4 6257 5167.1 3117.2 3359.1 FALSE TRUE 4952.046958 2891.645138 4381.629581 4054.227038 5850.398925 6618.028295 5839.606947 5121.924589 3441.244095 3775.250668 1.311713418 0.765947851 1.16061951 1.073896118 1.549671648 1.753003675 1.546813036 1.356711127 0.911527312 1 11.88235672 -6.240580085 21.58444957 1.400485352 1.061649516 0.186108403 0.270044195 205.0508689 212177.1335 0.082069796 0.105731054 5.75E-07 6.240580085 -0.338835836 WSLQSEAHR ddPTM_A459_MK2206_30min_R2 2 WSLQSEAHR 9 0 Q16658 Q16658 FSCN1 Fascin 0 ; 205.83 0.0016011 12065700 71030 126598 92782 142496 147413 159956 134256 95104 123975 96491 FALSE TRUE 76468.11141 120311.3274 95875.30557 130853.621 141624.8249 166043.2377 116628.0259 107534.4193 134758.1214 93342.50657 0.819220677 1.288923255 1.027134465 1.4018653 1.517259715 1.778859855 1.249463189 1.152041265 1.443695122 1 16.51024659 -5.764619367 24.98082499 1.388632423 1.069475808 0.287693349 0.226049926 104.0589705 817459.9418 0.064192526 0.099929866 1.72E-06 5.764619367 -0.319156615 WSNS(ph)QPADLAHMGR ddPTM_A459_MK2206_30min_R1 2 WSNSQPADLAHMGR 14 0 Q9BRG2;Q9BRG2-2;M0QZQ6 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 WS(0.002)NS(0.998)QPADLAHMGR;WS(0.036)NS(0.964)QPADLAHMGR 179.1 4.78E-05 10215900 2863.9 3052.6 2777.7 2077.04 3009 2552.38 2960.3 2142.3 2568.7 2219.59 TRUE FALSE 2620.310266 2853.875185 2589.157463 2237.013981 2889.145158 2696.89355 2762.823788 2123.570097 2835.725557 2494.569566 1.05040577 1.144035117 1.037917522 0.896753496 1.158173818 1.081105769 1.107535274 0.85127716 1.136759462 1 11.28457519 WSTELVPEGLQS(ph)PR ddPTM_A459_MK2206_30min_R1 1 WSTELVPEGLQSPR 14 0 H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BMM1;H3BV44 H3BRD5 MYO9A Unconventional myosin-IXa 1 WSTELVPEGLQS(1)PR 113.4 0.0033087 2571000 700.51 647.36 523.68 546.38 773.68 639.32 774.68 689.54 647.74 571.99 TRUE FALSE 640.927946 605.2167463 488.1340607 588.4622823 742.8626873 675.5177459 723.0025107 683.5114245 715.074891 642.8524395 0.997006321 0.94145516 0.759325205 0.91539247 1.155572635 1.050813071 1.124678801 1.063247773 1.112346858 1 9.328343809 -6.188951892 6.719288815 1.087708355 0.894109564 0.623040473 0.068927523 0.161520393 12.57199591 0.020576737 0.026624337 6.47E-07 6.188951892 -0.193598791 WTDGS(ph)LSPPAKEPLASDSR ddPTM_A459_MK2206_30min_R1 1 WTDGSLSPPAKEPLASDSR 19 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 WT(0.026)DGS(0.737)LS(0.235)PPAKEPLAS(0.001)DS(0.001)R 54.511 0.033366 29677000 1746.5 1681.3 1545 1505.3 1334.2 1634.4 1490.7 1655.3 1381.5 1153.6 TRUE FALSE 1597.951004 1571.847064 1440.129705 1621.238467 1281.055989 1726.938316 1391.258123 1640.827887 1525.111869 1296.516677 1.232495526 1.212361624 1.110768361 1.250457087 0.988075211 1.33198311 1.073073835 1.265566356 1.176314887 1 10.34042505 -11.96851134 1.665499382 5.06E-05 1.181046464 0.244881406 0.096035606 1101032.531 89805.42632 4130244.897 0.022183177 1.08E-12 11.96851134 1.180995843 WTDGS(ph)LSPPAKEPLASDSR ddPTM_A459_MK2206_30min_R2 3 WTDGSLSPPAKEPLASDSR 19 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 WT(0.017)DGS(0.491)LS(0.491)PPAKEPLAS(0.002)DSR;WTDGS(0.777)LS(0.223)PPAKEPLASDSR;WT(0.04)DGS(0.528)LS(0.421)PPAKEPLAS(0.011)DSR 121.51 0.0020307 90933200 119779 139768 137932 144928 138582 129506 147115 108325 126659 133324 TRUE FALSE 128949.3723 132827.3244 142530.584 133086.9188 133140.5744 134434.4416 127798.6238 122483.4494 137675.5709 128973.6488 0.999811772 1.029879558 1.105113993 1.031892329 1.032308348 1.042340376 0.990889418 0.949678098 1.067470543 1 16.97671681 -7.255949342 23.65080434 0.997816021 1.041965156 0.204039306 0.036506659 317.0909663 1366014.554 0.014285706 0.010716873 5.55E-08 7.255949342 0.044149135 WTDGSLS(ph)PPAK ddPTM_A459_MK2206_30min_R2 1 WTDGSLSPPAK 11 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 WTDGS(0.01)LS(0.99)PPAK 80.737 0.043217 2569900 39089 31932 31180 30680 26036 26973 33556 27460 17632 37625 TRUE FALSE 42081.68389 30346.30331 32219.52564 28173.34586 25013.69582 27999.47642 29150.05689 31049.11628 19165.59949 36397.29933 1.156175998 0.833751511 0.885217481 0.774050448 0.687240435 0.769273461 0.80088516 0.853060992 0.526566527 1 15.15154379 -1.784499693 0.992490318 0.768900639 199.9320339 0.468477069 0.117326992 738.8160346 1.897240943 0.035410929 333374.9219 0.016424808 1.784499693 199.1631333 WTDGSLS(ph)PPAKEPLASDSR ddPTM_A459_MK2206_30min_R1 2 WTDGSLSPPAKEPLASDSR 19 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 WT(0.002)DGS(0.085)LS(0.91)PPAKEPLAS(0.002)DSR;WT(0.002)DGS(0.258)LS(0.74)PPAKEPLASDSR 112.41 0.00031537 76268000 7125.36 7911 7684.15 6709.5 6820 6554.28 6605.07 7176.92 6163.27 5168.05 TRUE FALSE 6519.310715 7395.992462 7162.571307 7226.266853 6548.344958 6925.37767 6164.457832 7114.172945 6803.963972 5808.307051 1.122411515 1.273347362 1.233159894 1.244126178 1.127410259 1.192322928 1.061317485 1.224827283 1.171419471 1 12.50390201 -6.264733459 24.79053956 1.140517997 1.223260151 0.264834611 0.070816046 366.916245 2761329.986 0.020723193 0.024465558 5.44E-07 6.264733459 0.082742154 WTDGSLS(ph)PPAKEPLASDSR ddPTM_A459_MK2206_30min_R2 2 WTDGSLSPPAKEPLASDSR 19 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 WT(0.005)DGS(0.449)LS(0.545)PPAKEPLASDSR;WTDGS(0.016)LS(0.982)PPAKEPLAS(0.002)DSR 92.671 0.010442 8714900 23110.6 27737 28306 34477 31031 28272 32508 23666 25945 29866 TRUE FALSE 24879.96531 26359.62091 29249.70791 31660.11881 29812.56702 29347.91077 28239.66055 26759.22746 28201.6492 28891.47487 0.861152483 0.912366746 1.012399265 1.095829097 1.031881105 1.01579829 0.977439216 0.926198042 0.976123557 1 14.81835623 -5.11074779 3.364737016 1.005414298 0.868908289 0.574777248 0.041471167 0.20052575 4.097741133 0.01265734 0.044544303 7.75E-06 5.11074779 -0.136506009 WTGPEISPNTSGS(ph)SPVIHFTPSDLEVR ddPTM_A459_MK2206_30min_R2 1 WTGPEISPNTSGSSPVIHFTPSDLEVR 27 0 A0AVK6 A0AVK6 E2F8 Transcription factor E2F8 1 WTGPEISPNT(0.002)S(0.027)GS(0.485)S(0.485)PVIHFTPSDLEVR 120.42 5.29E-12 5268000 3393.1 8178.5 3505.7 7454 6073 7084.1 6016.4 5179.5 6855.5 5573.9 TRUE FALSE 3652.878345 7772.367583 3622.578288 6844.984356 5834.543506 7353.69039 5226.439453 5856.478434 7451.778998 5392.024099 0.677459573 1.441456388 0.671840152 1.269464719 1.082069256 1.363808888 0.969290819 1.086137288 1.382000314 1 12.39661123 -4.732486706 24.81098042 1.13252543 0.677456693 0.281628871 0.22159821 4148.652311 3554973.9 0.051432641 5.602392245 1.85E-05 4.732486706 -0.455068736 WTGPEISPNTSGSS(ph)PVIHFTPSDLEVR ddPTM_A459_MK2206_30min_R2 1 WTGPEISPNTSGSSPVIHFTPSDLEVR 27 0 A0AVK6 A0AVK6 E2F8 Transcription factor E2F8 1 WTGPEISPNT(0.002)S(0.014)GS(0.228)S(0.757)PVIHFTPSDLEVR 125.35 4.90E-12 4121000 10608 15415 12797 18277 19527 19134 18993 15617 15120 17249 TRUE FALSE 11420.15664 14649.51352 13223.64559 16783.71063 18760.27186 19862.15778 16499.19629 17658.19552 16435.11027 16686.16654 0.684408645 0.877943623 0.792491526 1.005845806 1.124300888 1.190336781 0.988794894 1.058253582 0.984954227 1 14.02636493 -5.823549017 3.690371889 1.064142218 0.790617598 0.731066619 0.074150493 0.117947964 3.221811555 0.02181534 0.035140656 1.50E-06 5.823549017 -0.27352462 WVSELS(ph)YVEEK ddPTM_A459_MK2206_30min_R1 2 WVSELSYVEEK 11 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 WVSELS(1)YVEEK;WVS(0.023)ELS(0.977)YVEEK 190.46 1.98E-05 4830700 1396.84 1624.64 1633.33 918.34 1241.93 1016.57 1563.58 1271.45 1495.54 1440.84 TRUE FALSE 1278.031423 1518.875641 1522.46411 989.0707059 1192.461298 1074.127315 1459.276431 1260.333847 1651.006735 1619.342137 0.789228782 0.93795845 0.940174455 0.610785506 0.736386259 0.663310915 0.901153868 0.778299914 1.019553989 1 10.66119212 -8.26262869 24.914788 1.009777026 0.795388794 0.406705172 0.103923358 109.8347628 2300765.124 0.089710224 0.028160005 5.46E-09 8.26262869 -0.214388232 WYNHIK ddPTM_A459_MK2206_30min_R2 1 WYNHIK 6 0 P24534;C9JZW3;F2Z2G2 P24534 EEF1B2 Elongation factor 1-beta 0 110.17 0.035679 4442400 92630 100360 90852 100350 95257 96502 100290 78351 89198 94811 FALSE TRUE 99721.82402 95376.26834 93880.96034 92151.084 91516.73155 100174.4512 87121.80253 88591.74472 96956.28081 91717.32483 1.087273579 1.039893701 1.02359026 1.004729305 0.997812918 1.092208603 0.949894719 0.965921595 1.05712068 1 16.48490666 -1.522880317 0.700688243 1.006617381 11.230151 0.272883087 0.038567711 390.6410686 2.067763859 0.015354921 6257.482241 0.029999891 1.522880317 10.22353362 Y(ph)AIPCLIGIS(ph)RAFGRYS(ph)NMEESLLSK ddPTM_A459_MK2206_30min_R2 1 YAIPCLIGISRAFGRYSNMEESLLSK 26 2 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 3 Y(1)AIPCLIGIS(0.999)RAFGRY(0.452)S(0.503)NMEES(0.038)LLS(0.008)K 49.106 0.039344 0 856.44 3724.1 2831.5 3758.5 5158.8 4190.3 3296.1 2836.1 4109.7 2824.7 TRUE FALSE 922.0097049 3539.166609 2925.900797 3451.418527 4956.239591 4349.764803 2863.318111 3206.788008 4467.154277 2732.53027 0.337419759 1.295197586 1.070766106 1.263085194 1.813791285 1.591845057 1.047863272 1.173559921 1.634805047 1 11.41602176 -4.755475741 4.936332389 1.336302216 0.265686176 0.560870587 0.261040651 0.147272919 9.119513118 0.068299857 0.552673396 1.76E-05 4.755475741 -1.07061604 Y(ph)EDGT(ph)LSLTS(ph)TSDLQS(ph)GIIK ddPTM_A459_MK2206_30min_R1 1 YEDGTLSLTSTSDLQSGIIK 20 0 P04114 P04114 APOB Apolipoprotein B-100;Apolipoprotein B-48 4 Y(0.939)EDGT(0.686)LS(0.374)LT(0.101)S(0.417)T(0.417)S(0.271)DLQS(0.795)GIIK 65.854 0.01534 8510800 0 0 0 66.547 0 159.28 66.409 0 60.826 0 TRUE FALSE 0 0 0 71.67246147 0 168.298296 61.97897678 0 67.14908037 0 0 Y(ph)FT(ph)TTRST(ph)LVNKEPDS(ph)MLAHMFK ddPTM_A459_MK2206_30min_R2 1 YFTTTRSTLVNKEPDSMLAHMFK 23 2 Q7L273 Q7L273 KCTD9 BTB/POZ domain-containing protein KCTD9 4 Y(0.798)FT(0.431)T(0.37)T(0.37)RS(0.217)T(0.816)LVNKEPDS(0.998)MLAHMFK 42.639 0.039049 8834100 11989 48161 19928 72123 47482 70473 30040 30955 41140 15132 TRUE FALSE 12906.88706 45769.39477 20592.38957 66230.32019 45617.6181 73154.8994 26095.71192 35000.92478 44718.28284 14638.24408 0.881723722 3.126699796 1.406752713 4.52447164 3.116331293 4.99751876 1.782707801 2.391060334 3.05489392 1 13.83745489 -5.723098483 24.99999361 3.078694215 1.9372228 0.156071501 1.227105475 312.9966839 204085.7136 0.326283983 0.56512651 1.89E-06 5.723098483 -1.141471415 Y(ph)GLIY(ph)HASLVGQT(ph)S(ph)PK ddPTM_A459_MK2206_30min_R1 1 YGLIYHASLVGQTSPK 16 0 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 4 Y(1)GLIY(0.892)HAS(0.234)LVGQT(0.926)S(0.948)PK 60.434 0.038441 0 0 0 0 0 146.83 154.3 197.29 119.69 0 119.07 TRUE FALSE 0 0 0 0 140.9814502 163.0363327 184.1291441 118.6435629 0 133.8212905 0 0 0 0 1.053505385 1.218313857 1.375933107 0.886582116 0 1 7.064163852 -6.257751754 24.59841815 0.954191641 1.76E-05 0.634124836 0.342730335 173.9395127 1160266.952 0.109342335 0.135638768 5.52E-07 6.257751754 -0.954174007 Y(ph)IY(ph)EKKS(ph)ET(ph)K ddPTM_A459_MK2206_30min_R1 1 YIYEKKSETK 10 2 A0A0G2JNU3;A6H8Y1-2;A6H8Y1-7;A6H8Y1-6;A6H8Y1 A0A0G2JNU3 BDP1 Transcription factor TFIIIB component B homolog 4 Y(1)IY(1)EKKS(1)ET(1)K 89.9 0.013824 0 337.7 515.17 536.14 817.93 1320.2 1516.6 1754.9 1453.9 1539 1273.3 TRUE FALSE 308.9768417 481.6323394 499.7483106 880.9271103 1267.613638 1602.468581 1637.833823 1441.188706 1698.984557 1431.046017 0.215909788 0.336559645 0.349218896 0.615582658 0.885795162 1.119788296 1.144501158 1.007087605 1.187232652 1 10.48285435 -6.126453836 1.386231119 1.101746238 0.2676502 0.96752494 0.063773888 0.064181337 0.248806181 0.022786802 0.036196395 7.47E-07 6.126453836 -0.834096038 down Y(ph)LGINSDGLVVGRSDAIGPR ddPTM_A459_MK2206_30min_R1 1 YLGINSDGLVVGRSDAIGPR 20 1 E9PRR7;Q14331 E9PRR7 FRG1 Protein FRG1 1 Y(0.993)LGINS(0.007)DGLVVGRSDAIGPR 76.868 0.031511 19881000 2805.5 771.07 862 808.84 6502.8 5547.6 5457.5 2392.8 976.29 682.42 TRUE FALSE 2566.877493 720.8732029 803.4898417 871.1369969 6243.779706 5861.700318 5093.440133 2371.880002 1077.778839 766.9633416 3.346805973 0.939905682 1.047624832 1.135826121 8.14091022 7.642738577 6.641047696 3.092559805 1.405254698 1 9.583013813 -6.224307342 24.93580542 5.007194695 1.528428917 0.275345341 2.370048944 708.4503012 475755.5732 0.744185681 0.960714026 5.97E-07 6.224307342 -3.478765778 Y(ph)LLGDAPVSPSSQK ddPTM_A459_MK2206_30min_R1 1 YLLGDAPVSPSSQK 14 0 Q9NYB0;A0A590UJT3;H3BMI8 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 Y(0.996)LLGDAPVS(0.004)PSSQK 183.03 0.0010714 281950000 7288.5 7132.5 7468.1 6518.3 6961.2 5926.8 6646.5 6406 6250.8 5994.8 TRUE FALSE 6668.574802 6668.172954 6961.186179 7020.340595 6683.920663 6262.370294 6203.124112 6349.993017 6900.593029 6737.481082 0.989772694 0.98971305 1.033203076 1.041982977 0.992050379 0.929482431 0.92068891 0.942487695 1.024209633 1 12.7179936 -6.550392544 7.651346116 0.957353804 1.013835898 0.333101642 0.033106237 0.210513335 45.80851293 0.011381386 0.011489846 2.82E-07 6.550392544 0.056482094 Y(ph)LLGDAPVSPSSQK ddPTM_A459_MK2206_30min_R2 3 YLLGDAPVSPSSQK 14 0 Q9NYB0;A0A590UJT3;H3BMI8 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 Y(1)LLGDAPVSPSSQK;Y(0.928)LLGDAPVS(0.072)PS(0.001)SQK;Y(0.98)LLGDAPVS(0.019)PSSQK 205.13 0.00021928 297243800 633762 692151 631380 696954 739813 569359 762746 620716 577514 694519 TRUE FALSE 682283.306 657779.7878 652429.8941 640010.6288 710764.2244 591026.3557 662596.534 701845.7124 627745.1238 671856.9019 1.015518787 0.979047452 0.971084605 0.952599619 1.057910133 0.87969083 0.986216756 1.044635711 0.934343492 1 19.35779446 -10.63458707 3.905076893 1.000006166 0.98042139 0.014267145 0.049524065 33777546.41 2444.413781 2020.182483 0.011475325 2.32E-11 10.63458707 -0.019584776 Y(ph)LTNEREPYAPGTEGNVKRK ddPTM_A459_MK2206_30min_R1 1 YLTNEREPYAPGTEGNVKRK 20 3 O95625;C9J2L2 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 1 Y(0.791)LT(0.206)NEREPY(0.002)APGTEGNVKRK 40.968 0.042132 1476500 1298.2 903.43 826.87 746.43 1349.6 1319.5 1224.7 1666.3 1015.8 1000.4 TRUE FALSE 1187.781273 844.6165428 770.7443682 803.9201679 1295.842574 1394.20895 1143.002498 1651.731715 1121.396045 1124.337105 1.056428066 0.751212905 0.685510035 0.715017022 1.152539188 1.240027518 1.016601243 1.469071605 0.997384183 1 10.13485894 -6.270566427 23.17224508 1.167628641 0.790087645 0.513917534 0.162864826 177.5402932 450747.992 0.048802264 0.056223115 5.36E-07 6.270566427 -0.377540996 Y(ph)MEDSTYYK ddPTM_A459_MK2206_30min_R2 1 YMEDSTYYK 9 0 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;H0YBZ1;H0YB16;Q05397-4;Q05397-3;E9PEI4 E7ESA6;E9PEI4 PTK2 Focal adhesion kinase 1 1 Y(0.999)MEDS(0.001)TYYK 160.88 0.012793 8957300 38804 48485 39182 48256 42009 34175 50432 32794 37674 42372 TRUE FALSE 41774.86408 46077.3054 40488.30832 44313.33044 40359.51558 35475.55357 43810.21782 37080.2884 40950.81642 40989.40511 1.019162488 1.124127205 0.987774968 1.081092305 0.98463287 0.865481055 1.068818093 0.904631045 0.999058569 1 15.32296343 -6.389040551 5.543807151 0.96374803 1.052970322 0.301584822 0.061719931 0.268991694 11.03180821 0.01828738 0.020739373 4.08E-07 6.389040551 0.089222292 Y(ph)NVFT(ph)RVNIS(ph)Y(ph)WEGK ddPTM_A459_MK2206_30min_R2 1 YNVFTRVNISYWEGK 15 1 A0A6I8PRZ5;A0A6I8PL17;Q16827-5;Q16827-2;Q16827 A0A6I8PRZ5 PTPRO Receptor-type tyrosine-protein phosphatase O 4 Y(1)NVFT(1)RVNIS(1)Y(1)WEGK 49.773 0.043152 6099600 31728 27750 32005 28612 35153 30010 32635 26048 27235 34685 TRUE FALSE 34157.12007 26371.97535 33072.03073 26274.30807 33772.71659 31152.05158 28349.9853 29452.56304 29603.85107 33553.23129 1.017997932 0.785974237 0.985658592 0.783063421 1.006541406 0.928436707 0.844925636 0.877786189 0.882295086 1 15.03416409 -4.702579239 23.52350569 0.897201763 1.018005026 0.173574328 0.077494491 27149.23428 10847529.1 0.017859857 42.66081074 1.98E-05 4.702579239 0.120803263 Y(ph)NVTTS(ph)KQLYTVAVS(ph)CLLLAS(ph)K ddPTM_A459_MK2206_30min_R1 4 YNVTTSKQLYTVAVSCLLLASK 22 1 E5RFJ6;E7EN43;B4DZA8 E5RFJ6 CCNJL 4 Y(0.33)NVT(0.416)T(0.445)S(0.465)KQLY(0.334)T(0.011)VAVS(1)CLLLAS(1)K;Y(0.347)NVT(0.405)T(0.437)S(0.459)KQLY(0.307)T(0.046)VAVS(1)CLLLAS(1)K;Y(0.342)NVT(0.42)T(0.442)S(0.457)KQLY(0.313)T(0.026)VAVS(1)CLLLAS(1)K;Y(0.33)NVT(0.401)T(0.425)S(0.442)KQLY(0.328)T(0.073)VAVS(1)CLLLAS(1)K 60.481 0.011571 713406000 22485.5 23126.2 20351.4 20911.9 19757.9 16207.7 14671.8 15412.2 15582.3 12012.4 TRUE FALSE 20572.99015 21620.68018 18970.00367 22522.53816 18970.901 17125.36597 13693.07099 15277.45276 17202.13585 13500.5868 1.523858959 1.601462255 1.405124381 1.668263646 1.405190847 1.26849049 1.014257469 1.13161398 1.274176901 1 13.72073449 -6.780454317 2.280592003 1.117898909 1.542216405 0.804664969 0.098016829 0.126170331 1.347168177 0.037053071 0.033780498 1.66E-07 6.780454317 0.424317496 Y(ph)NY(ph)VT(ph)PT(ph)SYLELIST(ph)FKLLLEK ddPTM_A459_MK2206_30min_R2 2 YNYVTPTSYLELISTFKLLLEK 22 1 Q8WXX0 Q8WXX0 DNAH7 "Dynein heavy chain 7, axonemal" 5 Y(0.952)NY(0.952)VT(0.867)PT(0.533)S(0.533)Y(0.155)LELIS(0.24)T(0.767)FKLLLEK;Y(0.952)NY(0.952)VT(0.87)PT(0.536)S(0.536)Y(0.153)LELIS(0.268)T(0.734)FKLLLEK 43.164 0.037316 7480700 22200.2 28480 22638.1 25268 25410.4 24464 26044 22990.8 22928 25851 TRUE FALSE 23899.86438 27065.72461 23392.84296 23203.52357 24412.66002 25394.99466 22624.39152 25995.7765 24922.236 25007.48399 0.955708475 1.082304986 0.935433687 0.927863178 0.976214162 1.015495788 0.904704829 1.03951987 0.996591101 1 14.61007229 Y(ph)RFQLQAT(ph)T(ph)K ddPTM_A459_MK2206_30min_R2 2 YRFQLQATTK 10 1 P32004-3;P32004-2;P32004 P32004-3 L1CAM Neural cell adhesion molecule L1 3 Y(1)RFQLQAT(1)T(1)K;Y(1)RFQLQAT(1)T(1)K 70.552 0.028545 0 56726 86795 47949 56982 75679 63460 46246 40352 33545 21378.1 TRUE FALSE 61068.98617 82484.88651 49547.59573 52326.38832 72707.4622 65875.01477 40173.84465 45626.14495 36462.68346 20680.53435 2.952969452 3.988527817 2.395856649 2.530224193 3.515743887 3.185363282 1.942592197 2.206236269 1.763140297 1 14.33598584 -7.991693518 0.687034247 1.033238606 3.157200285 0.67201958 0.482595119 0.419962867 0.414345777 0.481449085 0.22208335 1.02E-08 7.991693518 2.123961679 Y(ph)RSPEPDPYLSYR ddPTM_A459_MK2206_30min_R2 2 YRSPEPDPYLSYR 13 1 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 1 Y(0.677)RS(0.323)PEPDPYLSYR;Y(0.759)RS(0.241)PEPDPYLSYR 128.57 0.016497 128177000 232421 271800 228040 288900 296660 304340 308620 197018 232670 276460 TRUE FALSE 250215.3305 258302.8072 235642.7398 265295.9459 285011.6378 315921.872 268097.8233 222768.9291 252907.216 267439.1328 0.935597299 0.965837738 0.881107926 0.991986263 1.065706558 1.181285134 1.002462955 0.832970578 0.945662713 1 18.02885106 -5.927209185 8.487748658 1.007185285 0.931713174 0.14306598 0.084669282 0.639688752 66.9309538 0.027391657 0.040721117 1.18E-06 5.927209185 -0.07547211 Y(ph)S(ph)PIYSPDPY(ph)Y(ph)ASESEY(ph)WTYHGSPK ddPTM_A459_MK2206_30min_R2 1 YSPIYSPDPYYASESEYWTYHGSPK 25 0 A0A0C4DGA7;O94929-3;O94929-2;O94929 A0A0C4DGA7 ABLIM3 Actin-binding LIM protein 3 5 Y(0.606)S(0.667)PIY(0.325)S(0.429)PDPY(0.786)Y(0.485)AS(0.431)ES(0.205)EY(0.25)WT(0.182)Y(0.25)HGS(0.383)PK 44.301 0.03849 0 10877 15592 12574 12338 15564 11244 12195 8967.6 9688.5 18723 TRUE FALSE 11709.75148 14817.72395 12993.21088 11329.94593 14952.87916 11671.8983 10593.78185 10139.69611 10531.18822 18112.07004 0.646516464 0.81811322 0.717378569 0.625546716 0.825575383 0.644426522 0.584901771 0.55983088 0.581445864 1 14.14466382 -10.60825279 4.947738688 1.000009838 0.670205271 0.558454344 0.088769065 1.05E-05 1.93E-06 0.093355574 0.022641377 2.46E-11 10.60825279 -0.329804567 Y(ph)S(ph)PIYSPDPY(ph)Y(ph)ASESEYWTY(ph)HGSPK ddPTM_A459_MK2206_30min_R2 1 YSPIYSPDPYYASESEYWTYHGSPK 25 0 A0A0C4DGA7;O94929-3;O94929-2;O94929 A0A0C4DGA7 ABLIM3 Actin-binding LIM protein 3 5 Y(0.909)S(0.916)PIY(0.114)S(0.123)PDPY(0.753)Y(0.507)AS(0.384)ES(0.155)EY(0.203)WT(0.229)Y(0.465)HGS(0.242)PK 51.22 0.026748 0 14088 17494 16243 15539 18361 13770 19013 12067 12394 15845 TRUE FALSE 15166.58811 16625.2734 16784.53351 14269.41399 17640.05488 14294.027 16516.57026 13644.19833 13472.00772 15327.97895 0.989470834 1.084635715 1.095025872 0.930939039 1.150840234 0.932544796 1.077543903 0.890149861 0.878916116 1 13.90387986 -7.766145547 24.99912007 0.913399714 1.037576419 0.334944362 0.073408262 121.9546518 647804.7692 0.036116131 0.018246786 1.71E-08 7.766145547 0.124176706 Y(ph)SS(ph)S(ph)SLSHMGAY(ph)SRSLPR ddPTM_A459_MK2206_30min_R2 1 YSSSSLSHMGAYSRSLPR 18 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 4 Y(0.54)S(0.54)S(0.918)S(0.68)S(0.317)LS(0.082)HMGAY(0.441)S(0.461)RS(0.021)LPR 66.568 0.0082212 8355000 33101 31054 26767 31872 35070 30225 35394 35056 23831 31251 TRUE FALSE 35635.23801 29511.90352 27659.39842 29267.95565 33692.97559 31375.23355 30746.72528 39637.93957 25903.7773 30231.28243 1.178753766 0.976204155 0.914926401 0.96813477 1.11450699 1.03783998 1.017049983 1.311156404 0.856853406 1 14.88375456 -6.254516481 24.76376277 1.068913333 1.000370561 0.024823697 0.124450289 1511.219233 5405740.492 0.036050702 0.04547669 5.57E-07 6.254516481 -0.068542772 Y(ph)SS(ph)S(ph)SLSHMGAYS(ph)RSLPR ddPTM_A459_MK2206_30min_R2 1 YSSSSLSHMGAYSRSLPR 18 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 4 Y(0.545)S(0.55)S(0.9)S(0.915)S(0.087)LS(0.194)HMGAY(0.33)S(0.403)RS(0.075)LPR 43.946 0.037213 6959700 27024 18403 22069 21984 19401 20773 22461 20550 17187 26222 TRUE FALSE 29092.97822 17489.13378 22804.76945 20187.83688 18639.21926 21563.53107 19511.84372 23235.95556 18681.89419 25366.37829 1.146910997 0.689461207 0.899015586 0.795850186 0.734800177 0.850083162 0.769201007 0.916013918 0.73648252 1 14.63062993 -4.747301279 24.99276711 0.816802735 1.146911838 0.533385621 0.091305658 531.9001434 940218.0889 0.020570942 0.427009659 1.79E-05 4.747301279 0.330109102 Y(ph)SYLTEPGMIERS(ph)T(ph)GATR ddPTM_A459_MK2206_30min_R2 1 YSYLTEPGMIERSTGATR 18 1 Q12955 Q12955 ANK3 Ankyrin-3 3 Y(0.372)S(0.21)Y(0.372)LT(0.046)EPGMIERS(0.946)T(0.946)GAT(0.109)R 66.448 0.021858 30560000 1720.4 0 0 0 1295.8 0 0 0 0 0 TRUE FALSE 1852.115147 0 0 0 1244.920381 0 0 0 0 0 0 Y(ph)VS(ph)KY(ph)S(ph)LVK ddPTM_A459_MK2206_30min_R2 1 YVSKYSLVK 9 1 Q96FQ6 Q96FQ6 S100A16 Protein S100-A16 4 Y(1)VS(1)KY(1)S(1)LVK 69.423 0.02026 0 7452.2 14668 9093.2 22649 19781 22186 16813 15737 18862 18924 TRUE FALSE 8022.746162 13939.60845 9396.36275 20798.50425 19004.29855 23030.30378 14605.4329 17793.87993 20502.58267 18306.51143 0.438245495 0.761456299 0.513279812 1.136126035 1.038116881 1.258038915 0.797827208 0.971997314 1.119961209 1 14.16006927 -5.760184119 24.99999971 1.043007647 0.590040041 0.717428262 0.136447147 18.03781669 359227.8184 0.037499663 0.060621351 1.74E-06 5.760184119 -0.452967606 Y(ph)Y(ph)S(ph)KNRPTEAVR ddPTM_A459_MK2206_30min_R1 1 YYSKNRPTEAVR 12 2 Q92902-2;Q92902-4;Q92902 Q92902-2 HPS1 Hermansky-Pudlak syndrome 1 protein 3 Y(1)Y(1)S(1)KNRPTEAVR 85.536 0.010328 0 695.69 761.72 979.36 799.92 974.02 798.11 1039.8 960.66 1023.4 781.9 TRUE FALSE 636.5179123 712.1318896 912.8837719 861.529977 935.2227209 843.2982985 970.4368392 952.2610509 1129.786092 878.767675 0.724330139 0.810375609 1.038822658 0.980384237 1.064243426 0.959637368 1.104315585 1.083632316 1.285648214 1 9.779337992 -3.979872515 0.499981481 1.108234972 6.10E-15 0.681911757 0.083426487 5.486175489 0.575191058 0.049064437 4.233734878 0.000104744 3.979872515 -1.108234972 Y(ph)YKINGT(ph)T(ph)T(ph)R ddPTM_A459_MK2206_30min_R1 1 YYKINGTTTR 10 1 Q32MC3;Q9UBL9-7;Q9UBL9-5;Q9UBL9-6;Q9UBL9-2;Q9UBL9-3;Q9UBL9;Q9UBL9-4 Q32MC3 P2RX2 P2X purinoceptor;P2X purinoceptor 2 4 Y(0.5)Y(0.5)KINGT(1)T(1)T(1)R 62.694 0.030717 947440000 7939.3 2745.9 3184.2 5820.6 3592.6 6969.3 5468.9 2968.1 3271.7 3443.3 TRUE FALSE 7264.020844 2567.141411 2968.065376 6268.903621 3449.499135 7363.895743 5104.07966 2942.150215 3611.804923 3869.882 1.877065204 0.663364261 0.766965343 1.61992113 0.891370624 1.902873458 1.318923848 0.760268715 0.933311383 1 11.91807386 -7.754599993 24.7977298 0.885092522 1.267921053 0.159623076 0.411104874 274.7007396 996000.496 0.200041344 0.112152937 1.76E-08 7.754599993 0.382828532 YAALS(ph)VDGEDENEGEDYAE ddPTM_A459_MK2206_30min_R2 1 YAALSVDGEDENEGEDYAE 19 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 YAALS(1)VDGEDENEGEDYAE 154.81 3.42E-05 0 20797 23439 17138 16830 18910 21379 18120 16743 20285 15091 TRUE FALSE 22389.23431 22275.05334 17709.37237 15454.93516 18167.49838 22192.59283 15740.82223 18931.36759 22049.35263 14598.58191 1.533658163 1.525836789 1.213088537 1.05866003 1.244470079 1.52018826 1.078243239 1.29679497 1.510376335 1 13.83354061 -1.52289942 0.024668822 1.05E-07 3.057496476 0.205132451 0.179725554 4045.018669 7.702765189 330.1620603 683.4399926 0.029998572 1.52289942 3.057496371 YAALSVDGEDENEGEDYAE ddPTM_A459_MK2206_30min_R1 2 YAALSVDGEDENEGEDYAE 19 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ; 221.6 3.17E-18 24458000 19531.5 20598.3 20515.3 18833.5 22300 19581 20336.2 19289.8 17286.6 16389.8 FALSE TRUE 17870.24336 19257.34693 19122.77859 20284.05943 21411.74378 20689.6593 18979.6092 19121.15131 19083.60393 18420.29216 0.970138975 1.045441992 1.038136552 1.101180115 1.162399792 1.123199302 1.030364179 1.03804821 1.03600984 1 14.16900832 -4.638306676 1.476196893 1.073782785 0.902943879 0.267652895 0.0470075 2.314297657 3.624809303 0.014698616 0.642693986 2.30E-05 4.638306676 -0.170838906 YAALSVDGEDENEGEDYAE ddPTM_A459_MK2206_30min_R2 2 YAALSVDGEDENEGEDYAE 19 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ; 138.63 0.0019955 8063000 43951 60426 53615 64798 62953 63445 65676 47666 57625 59760 FALSE TRUE 47315.92235 57425.33271 55402.49734 59503.79612 60481.14891 65859.44393 57052.66231 53896.10986 62637.11834 57810.03609 0.818472458 0.993345388 0.958354312 1.029298719 1.046205002 1.139238935 0.986898922 0.932296769 1.083499035 1 15.81903235 -3.959144412 1.079530362 1.028181708 8.62E-13 0.542746029 0.056098087 7.061431051 1.832717807 0.018107443 12.72329723 0.000109864 3.959144412 -1.028181708 YACGLWGLS(ph)PASR ddPTM_A459_MK2206_30min_R1 2 YACGLWGLSPASR 13 0 Q15637-6;H7C0N4;H7C561 Q15637-6 SF1 Splicing factor 1 1 YACGLWGLS(1)PASR;YACGLWGLS(1)PASR 175.48 9.86E-05 38929000 3635.8 3439.7 3474.8 2664.9 3567.6 2909.5 3073.4 3137.4 3176.6 2665.7 TRUE FALSE 3326.556118 3215.774905 3238.940257 2870.15106 3425.494937 3074.233376 2868.379094 3109.970043 3506.818938 2995.947041 1.11035211 1.073375083 1.081107314 0.95801128 1.143376332 1.026130747 0.957419826 1.038059084 1.170521004 1 11.54879641 -5.552704006 24.94482126 1.041717671 1.088208196 0.094419028 0.06613981 490.7824302 410471.0809 0.018035271 0.031238228 2.80E-06 5.552704006 0.046490525 YACGLWGLS(ph)PASR ddPTM_A459_MK2206_30min_R2 1 YACGLWGLSPASR 13 0 Q15637-6;H7C0N4;H7C561 Q15637-6 SF1 Splicing factor 1 1 YACGLWGLS(0.995)PAS(0.005)R 109.6 0.0058794 6916800 14659 23968 22694 22662 23918 27037 20461 16098 19150 23717 TRUE FALSE 15781.30431 22777.78397 23450.60663 20810.44211 22978.85914 28065.91198 17774.44612 18202.06387 20815.63238 22943.11623 0.687844849 0.992793819 1.022119506 0.907045141 1.001557893 1.223282474 0.774718044 0.793356216 0.907271365 1 14.48577374 -10.44323399 4.074491247 1.000002511 0.930730619 0.022745625 0.143569964 80463777.77 141839002.3 3049.918407 0.037003445 3.60E-11 10.44323399 -0.069271891 YADEEIPRS(ph)PFK ddPTM_A459_MK2206_30min_R1 2 YADEEIPRSPFK 12 1 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 1 YADEEIPRS(1)PFK;YADEEIPRS(1)PFK 74.853 0.027921 96384000 9896 11612.7 9868 10072.3 10514.9 9693.9 10881.8 11214.4 10725.5 10393 TRUE FALSE 9054.293234 10856.71112 9198.187654 10848.07029 10096.06927 10242.76024 10155.89498 11116.35368 11840.45411 11680.5633 0.775158954 0.929468112 0.787478088 0.928728351 0.864347806 0.876906359 0.869469623 0.951696711 1.013688621 1 13.51182223 -7.914056943 2.394860572 1.006819955 0.863378878 0.612143684 0.04754124 0.19462649 2.14959038 0.032788899 0.012285957 1.22E-08 7.914056943 -0.143441078 YADEEIPRS(ph)PFK ddPTM_A459_MK2206_30min_R2 2 YADEEIPRSPFK 12 1 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 1 YADEEIPRS(1)PFK;YADEEIPRS(1)PFK 98.592 0.0083273 46804000 111596 129404 108828 116782 119668 85707 131126 94234 80806 117752 TRUE FALSE 120139.8756 122977.9855 112456.2712 107240.537 114969.233 88968.63994 113908.9987 106550.7074 87834.35982 113909.7619 1.054693413 1.079608837 0.987239981 0.941451683 1.009300969 0.781044912 0.9999933 0.935395752 0.771087204 1 16.79753186 -5.614058365 0.947287457 0.904723804 1.088042918 0.362375938 0.079107715 0.838188993 1.287749633 0.030443559 0.121512673 2.43E-06 5.614058365 0.183319114 YADLTEDQLPSCESLKDTIAR ddPTM_A459_MK2206_30min_R1 2 YADLTEDQLPSCESLKDTIAR 21 1 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 0 ; 96.455 0.001091 33856000 2418.38 2788.3 2734 2583.2 2942.5 2442.51 2438.9 2799.92 2377.94 2094.32 FALSE TRUE 2212.684082 2606.781163 2548.423697 2782.158512 2825.293994 2580.802805 2276.205431 2775.440595 2625.135373 2353.780173 0.940055536 1.107487094 1.082694011 1.181995899 1.200321945 1.096450227 0.967042486 1.179141802 1.115284852 1 11.20076387 -4.761231106 7.832827239 1.109484376 0.937751976 0.314691066 0.07180487 0.118231436 59.4760876 0.01818453 0.10732624 1.73E-05 4.761231106 -0.1717324 YADLTEDQLPSCESLKDTIAR ddPTM_A459_MK2206_30min_R2 1 YADLTEDQLPSCESLKDTIAR 21 1 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 0 64.26 0.030991 4641800 8991 13021 9900 8733.3 10949 11896 10641 6941.2 9563.1 8365.3 FALSE TRUE 9679.357873 12374.39607 10230.06106 8019.761454 10519.08725 12348.71062 9243.823918 7848.438673 10394.88115 8092.340946 1.196113453 1.529149125 1.264165849 0.991031088 1.299881866 1.525975079 1.142292938 0.969860109 1.284533267 1 12.98234139 -7.504345294 24.60953372 1.087533291 1.298810233 0.269686332 0.16475859 872.2583555 1158228.128 0.072300694 0.047744473 3.13E-08 7.504345294 0.211276943 YADS(ph)PGASSPEQPK ddPTM_A459_MK2206_30min_R2 1 YADSPGASSPEQPK 14 0 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 YADS(0.935)PGAS(0.023)S(0.042)PEQPK 118.52 0.0029012 0 8502.3 12401 10442 11905 10797 8858.4 11747 7820.4 11048 11087 TRUE FALSE 9153.242625 11785.18437 10790.13107 10932.32342 10373.05553 9195.512619 10204.60479 8842.553131 12008.93507 10725.2321 0.853430727 1.09882791 1.006051055 1.019308796 0.967163735 0.8573719 0.951457712 0.824462636 1.119689995 1 13.38872125 -6.520829262 24.9750699 0.936633487 1.001512942 0.033851891 0.093992175 194.3260487 2368109.272 0.029230877 0.029693463 3.01E-07 6.520829262 0.064879455 YADSPGAS(ph)SPEQPK ddPTM_A459_MK2206_30min_R1 2 YADSPGASSPEQPK 14 0 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 YADSPGAS(0.5)S(0.5)PEQPK;YADSPGAS(0.5)S(0.5)PEQPK 238.88 1.90E-19 44186000 13149.4 14253 13764.8 11463 11870.3 10049 11844 11347.5 11934.1 11247.2 TRUE FALSE 12030.97448 13325.12711 12830.48373 12345.88225 11397.48082 10617.9657 11053.90837 11248.29 13174.6924 12640.58805 0.951773322 1.054154052 1.015022693 0.976685752 0.901657484 0.839989853 0.874477384 0.889854963 1.042253126 1 13.62577596 -6.083422027 3.514526273 0.91274368 1.010504019 0.260122974 0.061036206 0.287286207 6.74308524 0.018861591 0.025847281 8.25E-07 6.083422027 0.097760339 YADSPGAS(ph)SPEQPK ddPTM_A459_MK2206_30min_R2 1 YADSPGASSPEQPK 14 0 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 YADSPGAS(0.5)S(0.5)PEQPK 133.98 0.00068246 38799000 134700 144480 147310 140680 121440 106070 149590 116000 99587 149740 TRUE FALSE 145012.7356 137305.3333 152221.2419 129185.994 116671.6554 110106.5682 129948.6533 131161.5983 108248.8972 144853.9961 1.001095859 0.947887784 1.050859804 0.8918359 0.805443126 0.760121026 0.897100921 0.905474491 0.74729659 1 17.14423996 -5.933529545 5.518288378 0.84559996 0.993627985 0.442533626 0.073610094 0.177838193 10.24869321 0.020360074 0.030460846 1.17E-06 5.933529545 0.148028025 YADSPGASS(ph)PEQPK ddPTM_A459_MK2206_30min_R2 1 YADSPGASSPEQPK 14 0 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 YADSPGAS(0.042)S(0.958)PEQPK 228.17 3.52E-13 33545000 119050 147980 140280 128280 118760 101900 133800 109230 103100 134630 TRUE FALSE 128164.5595 140631.5284 144956.8652 117799.1137 114096.8857 105777.8759 116231.8993 123506.736 112067.4516 130237.0341 0.984086903 1.079812124 1.11302339 0.904497822 0.876070977 0.812195061 0.892464268 0.948322702 0.860488358 1 16.99078023 -5.80195949 9.078126498 0.891873584 1.060953404 0.627749369 0.056203288 0.1791479 37.69071047 0.015806892 0.023633117 1.58E-06 5.80195949 0.16907982 YADSPGASS(ph)PEQPKR ddPTM_A459_MK2206_30min_R1 2 YADSPGASSPEQPKR 15 1 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 YADSPGAS(0.25)S(0.75)PEQPKR;YADSPGAS(0.433)S(0.567)PEQPKR 73.953 0.021388 40891000 5599.4 5697.7 6079.8 5381.5 5540.3 5352 5481.6 5026.9 4514.4 4165.9 TRUE FALSE 5123.141626 5326.778694 5667.120115 5795.984062 5319.618119 5655.025615 5115.932466 4982.950343 4983.688035 4682.003143 1.094220031 1.137713609 1.210405022 1.237928272 1.136184226 1.207821832 1.092680272 1.064277445 1.064435004 1 12.19291019 -7.504003432 2.802743148 1.047477136 1.172503979 0.639258616 0.043379152 0.190247768 3.003021324 0.023595741 0.013334954 3.13E-08 7.504003432 0.125026842 YAEEDRR ddPTM_A459_MK2206_30min_R2 2 YAEEDRR 7 1 P38646;H0Y8S0 P38646 HSPA9 "Stress-70 protein, mitochondrial" 0 ; 115.46 0.017629 37915000 45203 36634 38290 39192 35734 43385 40039 34949 71001 43950 FALSE TRUE 48663.77644 34814.80883 39566.56949 35989.88823 34330.90361 45036.04658 34781.8312 39516.9543 77176.53864 42515.9151 1.144601412 0.81886533 0.93062961 0.846503907 0.807483587 1.059275014 0.818089676 0.929462631 1.815238798 1 15.37571537 -8.145449525 10.02429995 1.406582202 0.910390838 0.463337935 0.210090528 0.285396398 22.57667465 0.128203334 0.048359918 7.15E-09 8.145449525 -0.496191364 YAELLEEHR ddPTM_A459_MK2206_30min_R2 1 YAELLEEHR 9 0 P40222 P40222 TXLNA Alpha-taxilin 0 157.34 4.45E-05 0 16060 18438 15339 18281 17106 18380 19013 14865 14488 16907 FALSE TRUE 17289.56595 17522.39573 15850.3946 16787.38382 16434.33249 19079.46378 16516.57026 16807.90654 15748.14005 16355.32597 1.057121452 1.071357169 0.969127404 1.026416951 1.004830629 1.166559677 1.009858824 1.027671754 0.96287534 1 13.99747289 -7.990404486 2.493674072 0.98314778 1.044561185 0.188019199 0.050382198 0.531558706 6.259593791 0.040417188 0.014205685 1.02E-08 7.990404486 0.061413405 YAHVVLR ddPTM_A459_MK2206_30min_R1 2 YAHVVLR 7 0 P62269 P62269 RPS18 40S ribosomal protein S18 0 ; 118.06 0.015662 11475000 12787.2 13859.1 14827 11763.8 12644.3 12529.3 15186.4 13964 13776.1 13998.6 FALSE TRUE 11699.58149 12956.87007 13820.58455 12669.84991 12140.65076 13238.69814 14173.34297 13841.91422 15208.17489 15732.85225 0.743640206 0.823555059 0.878453845 0.805311695 0.771675127 0.841468408 0.900875616 0.879809586 0.966650843 1 13.94149262 -7.934587174 0.803166729 1.000533491 0.807363941 0.769258823 0.037011815 0.309910178 0.387754094 0.036350225 0.015337811 1.16E-08 7.934587174 -0.19316955 YALPLVGHR ddPTM_A459_MK2206_30min_R1 1 YALPLVGHR 9 0 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 134.81 0.0043218 0 3004 3257.2 3600.4 3294.4 3990.4 2873.6 3487.8 3107.5 3171 3019.3 FALSE TRUE 2748.494025 3045.155688 3356.014879 3548.135259 3831.453918 3036.300749 3255.135226 3080.331455 3500.636798 3393.353679 0.809963913 0.897388241 0.988996491 1.045613159 1.129105387 0.894778746 0.959267891 0.907754318 1.031615661 1 11.72849609 -5.005628298 2.433335474 0.993339476 0.805043254 0.463534876 0.064060069 0.348038183 3.515677368 0.018413589 0.112645435 9.87E-06 5.005628298 -0.188296222 YALPLVGHR ddPTM_A459_MK2206_30min_R2 2 YALPLVGHR 9 0 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 ; 126.28 0.0068038 2560600 44134 53377 44814 56704 47229 55824 52604 41164 44573 46433 FALSE TRUE 47512.93297 50726.3758 46308.07639 52071.10181 45374.55215 57948.42144 45697.03161 46544.27614 48449.87897 44917.89501 1.05777292 1.12931329 1.030949388 1.159250713 1.010166486 1.290096551 1.017345795 1.036207866 1.078632001 1 15.4550027 YALYDASFETK ddPTM_A459_MK2206_30min_R1 2 YALYDASFETK 11 0 P60981;P60981-2;F6RFD5 P60981 DSTN Destrin 0 ; 182.16 0.00052726 20822000 3146.9 3305.3 3621.5 3422.3 3029.5 2972.2 3151 3025.81 2387 2651.7 FALSE TRUE 2879.23963 3090.124369 3375.68267 3685.886139 2908.8286 3140.483395 2940.802539 2999.355662 2635.137192 2980.212615 0.966118865 1.036880508 1.132698604 1.236786302 0.976047341 1.053778304 0.986776086 1.006423383 0.884211139 1 11.54119954 -7.177278597 1.26036621 0.95730704 1.083175336 0.288554964 0.077969599 0.620112523 1.947776117 0.050668954 0.031352937 6.65E-08 7.177278597 0.125868297 YALYDATYETK ddPTM_A459_MK2206_30min_R1 2 YALYDATYETK 11 0 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;E9PLJ3;Q9Y281-3;Q9Y281 P23528;Q9Y281 CFL1;CFL2 Cofilin-1;Cofilin-2 0 ; 247.51 3.79E-14 76131000 7368.5 8147.9 8317.4 8584.4 7797.7 7559.9 7797.9 8027.5 6079.2 6443.4 FALSE TRUE 6741.770381 7617.470229 7752.838062 9245.571975 7487.101097 7987.935005 7277.716319 7957.316414 6711.154595 7241.657037 0.930970681 1.051896022 1.070588958 1.276720498 1.033893356 1.103053481 1.004979424 1.098825362 0.926742948 1 12.82210414 -8.25734086 24.63500252 0.96337147 1.075130504 0.203424905 0.085221573 423.6254099 2546336.515 0.063805989 0.022114803 5.53E-09 8.25734086 0.111759034 YAPNPGGGSYSLQPS(ph)PCLLR ddPTM_A459_MK2206_30min_R2 2 YAPNPGGGSYSLQPSPCLLR 20 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 YAPNPGGGSYSLQPS(1)PCLLR;YAPNPGGGSYSLQPS(1)PCLLR 188.26 1.35E-15 8033000 27725 34331.5 34510 43045 37070 39596 39297 25206.5 44715 49198 TRUE FALSE 29847.64732 32626.64763 35660.54618 39528.08581 35614.44554 41102.85353 34137.2567 28501.0761 48604.22987 47592.67329 0.627147946 0.685539294 0.74928647 0.830549811 0.74831782 0.86363826 0.717279664 0.59885428 1.02125446 1 15.53845187 -14.52287874 0.095806313 1.806114089 0.573025044 0.417272503 0.104377644 215.8354886 1.414437086 34.77871483 2.053958818 3.00E-15 14.52287874 -1.233089045 YAPS(ph)EAGLHEMDIR ddPTM_A459_MK2206_30min_R1 2 YAPSEAGLHEMDIR 14 0 P21333-2;P21333;Q60FE5;A0A087WWY3;H0Y5F3 P21333-2 FLNA Filamin-A 1 Y(0.002)APS(0.998)EAGLHEMDIR;Y(0.001)APS(0.999)EAGLHEMDIR 81.723 0.02072 8921800 2591.6 2478.74 2760.7 2578.17 3063.99 2799.08 2789.7 2963.7 2066.02 1934.29 TRUE FALSE 2371.170811 2317.373575 2573.311376 2776.7411 2941.94479 2957.561491 2603.604203 2937.788683 2280.790172 2173.924448 1.090732851 1.065986252 1.183717023 1.277294205 1.353287504 1.360471148 1.19765165 1.351375705 1.049157975 1 11.08608609 -5.444368151 3.325897562 1.250785816 1.07885305 0.176935056 0.11848478 0.332839104 7.020582222 0.03109048 0.07033134 3.59E-06 5.444368151 -0.171932766 YAPS(ph)EAGLHEMDIR ddPTM_A459_MK2206_30min_R2 1 YAPSEAGLHEMDIR 14 0 P21333-2;P21333;Q60FE5;A0A087WWY3;H0Y5F3 P21333-2 FLNA Filamin-A 1 YAPS(1)EAGLHEMDIR 87.157 0.014828 6171600 11087 16696 11692 12256 19790 14425 20114 12784 11549 13724 TRUE FALSE 11935.82924 15866.90092 12081.80544 11254.64559 19012.94516 14973.95348 17473.00764 14454.91269 12553.51114 13276.187 0.899040458 1.195139908 0.910035799 0.847731777 1.43210887 1.127880579 1.316116415 1.088784957 0.945566008 1 13.69655324 -4.743932377 23.92466059 1.103523466 0.899039383 0.102512632 0.173465488 1563.083642 2135874.217 0.044599056 1.246675914 1.80E-05 4.743932377 -0.204484083 YAPSEAGLHEMDIR ddPTM_A459_MK2206_30min_R1 3 YAPSEAGLHEMDIR 14 0 P21333-2;P21333;Q60FE5;A0A087WWY3;H0Y5F3 P21333-2 FLNA Filamin-A 0 ;; 211.83 4.60E-06 31755400 11080.8 9248.6 9986.7 8740.2 13128.6 11986.2 11894.9 11083.1 10086.4 8880.2 FALSE TRUE 10138.31977 8646.514459 9308.830629 9413.371718 12605.66006 12664.84829 11101.41292 10986.20163 11134.91737 9980.346218 1.015828464 0.866354159 0.932716203 0.943190899 1.263048374 1.268978852 1.112327437 1.100783619 1.115684479 1 13.28487415 -6.233411058 18.8652298 1.153227609 0.933808583 0.599807166 0.081324608 23.96923397 16132.27427 0.024753437 0.031924418 5.84E-07 6.233411058 -0.219419025 YAPSEAGLHEMDIR ddPTM_A459_MK2206_30min_R2 1 YAPSEAGLHEMDIR 14 0 P21333-2;P21333;Q60FE5;A0A087WWY3;H0Y5F3 P21333-2 FLNA Filamin-A 0 150.26 0.00059616 8702200 16439 22869 18788 20620 24958 30474 22272 19174 19759 19406 FALSE TRUE 17697.58248 21733.35871 19414.38254 18935.28004 23978.02352 31633.70942 19347.65965 21680.10763 21477.6021 18772.78381 0.942725525 1.157705694 1.034177069 1.008655947 1.277275856 1.685083563 1.030622834 1.154869084 1.144081897 1 14.19635498 -6.260681175 24.98974793 1.237318762 1.044405386 0.178503246 0.18471133 120.3423649 3966383.596 0.057975912 0.070435084 5.49E-07 6.260681175 -0.192913376 YASICQQNGIVPIVEPEILPDGDHDLKR ddPTM_A459_MK2206_30min_R1 2 YASICQQNGIVPIVEPEILPDGDHDLKR 28 1 P04075;P04075-2;H3BQN4;H3BPS8;P09972 P04075;P09972 ALDOA;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C 0 ; 138.8 1.03E-12 62008000 5267.4 5307.9 4997.6 5129.1 5219.6 4449.2 5124.5 5598.2 4250 4002.6 FALSE TRUE 4819.37997 4962.354745 4658.376836 5524.144171 5011.692279 4701.109859 4782.653955 5549.255528 4691.802709 4498.472306 1.071337032 1.103119994 1.035546408 1.228004486 1.114087614 1.04504586 1.063172924 1.233586682 1.042976902 1 12.13521943 -9.331288996 15.6526524 1.000004777 1.10685875 0.170963512 0.068527302 0 0 0.06531956 0.01584232 4.66E-10 9.331288996 0.106853973 YASICQQNGIVPIVEPEILPDGDHDLKR ddPTM_A459_MK2206_30min_R2 3 YASICQQNGIVPIVEPEILPDGDHDLKR 28 1 P04075;P04075-2;H3BQN4;H3BPS8;P09972 P04075;P09972 ALDOA;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C 0 ;; 97.999 6.70E-07 15635800 33774 38755.1 36882.6 42264.3 41677 36700.6 46032 33728.4 33748.9 43303 FALSE TRUE 36359.76341 36830.57809 38112.24748 38811.17149 40040.55157 38097.26705 39987.94311 38136.81769 36684.31832 41890.02666 0.867981386 0.879220689 0.90981674 0.926501475 0.955849274 0.909459126 0.954593403 0.91040328 0.875729171 1 15.35431918 -5.350299818 1.962538219 0.930404267 0.868276598 0.36178545 0.031501675 0.418293279 2.975494894 0.008782418 0.030156522 4.46E-06 5.350299818 -0.062127668 YAT(ph)SPKPNNSYMFK ddPTM_A459_MK2206_30min_R1 1 YATSPKPNNSYMFK 14 1 Q6P1L5 Q6P1L5 FAM117B Protein FAM117B 1 YAT(0.914)S(0.086)PKPNNSYMFK 179.83 0.00075723 12078000 2106.6 2373.2 2455.3 1891.1 2268.5 1669.2 2377.8 2452.8 2084.7 2200.8 TRUE FALSE 1927.422608 2218.704249 2288.641077 2036.75285 2178.140841 1763.708662 2219.181301 2431.355428 2301.412025 2473.451719 0.779244079 0.8970073 0.925282292 0.823445566 0.880607786 0.713055625 0.897200169 0.982980751 0.930445501 1 11.27231002 -7.54400538 6.668725229 0.96331505 0.841435904 0.50684895 0.059305862 0.151410487 26.13051391 0.028314292 0.016588253 2.86E-08 7.54400538 -0.121879146 YCAGWADK ddPTM_A459_MK2206_30min_R1 2 YCAGWADK 8 0 P00352;Q5SYQ9;Q5SYQ8;Q5SYQ7 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 154.31 0.010199 152692000 10737.3 11330.8 11271.1 10319.1 10545.2 9969.6 11537.3 9831.2 9163.1 8486.2 FALSE TRUE 9824.036251 10593.16286 10506.04914 11113.87887 10125.16235 10534.07014 10767.66777 9745.246855 10115.63704 9537.534524 1.030039391 1.11068147 1.101547691 1.16527797 1.061612131 1.104485662 1.128978117 1.021778409 1.060613412 1 13.21940066 -7.770383042 24.96434651 1.030896909 1.101979702 0.450647934 0.03680158 182.5474957 509533.8328 0.019395486 0.009535771 1.70E-08 7.770383042 0.071082793 YCDPDSYHR ddPTM_A459_MK2206_30min_R1 4 YCDPDSYHR 9 0 P26368-2;P26368;K7ENG2 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 0 ;;; 169.09 0.0010198 26229500 22729.7 17259.9 19385.9 14524.3 24803.9 24009.4 25882.6 19209.5 17006.1 17284.1 FALSE TRUE 20796.41966 16136.27737 18070.03912 15642.9641 23815.90814 25368.79148 24156.01898 19041.55337 18773.94495 19425.3848 1.070579547 0.830679935 0.930228117 0.805284645 1.22601989 1.305960821 1.243528467 0.98024073 0.966464508 1 14.24565556 -6.262741161 24.99360757 1.134818664 0.905087484 0.392875105 0.127810581 124.3664566 2387776.861 0.041890149 0.050203193 5.46E-07 6.262741161 -0.229731181 YCDPDSYHR ddPTM_A459_MK2206_30min_R2 3 YCDPDSYHR 9 0 P26368-2;P26368;K7ENG2 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 0 ;; 177.7 0.00099297 29624000 98842 114054 102686 150298 123676 158053 153288 114685 127633 111187 FALSE TRUE 106409.4195 108390.2442 106109.5 138018.1726 118819.8588 164067.8177 133161.1015 129674.7233 138734.2876 107558.9773 0.989312303 1.007728475 0.986523884 1.283185989 1.104694948 1.525375397 1.238028706 1.205615064 1.289843871 1 16.71476842 -5.758251713 24.97832151 1.250581097 0.995842181 0.421673391 0.12831231 72.25742976 566191.9926 0.03416895 0.056158747 1.74E-06 5.758251713 -0.254738916 YCDPDSYHRR ddPTM_A459_MK2206_30min_R1 1 YCDPDSYHRR 10 1 P26368-2;P26368;K7ENG2 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 0 94.692 0.031881 4002900 3474.3 2118.3 3057 2756.4 4939.1 3612.4 3315.8 3947.9 1414.5 1404.7 FALSE TRUE 3178.792541 1980.398285 2849.499357 2968.698406 4742.365188 3816.930966 3094.609032 3913.383927 1561.542337 1578.724841 2.013519049 1.254429039 1.804937303 1.880440675 3.003921307 2.417730353 1.960195312 2.478825838 0.989116214 1 10.62454403 -5.771247388 3.416834933 2.093420327 1.628356078 0.014800028 0.619881183 0.583449331 14.26148584 0.174929595 0.29708751 1.69E-06 5.771247388 -0.465064249 YCHDLGER ddPTM_A459_MK2206_30min_R1 2 YCHDLGER 8 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 0 ; 131.03 0.005158 8139700 5210.7 4996.8 5961.5 4741.4 5781 4631.7 5593.2 4978 4469.6 4165.4 FALSE TRUE 4767.502603 4671.507412 5556.84999 5106.58345 5550.730529 4893.942851 5220.087833 4934.477871 4934.230915 4681.441199 1.018383528 0.997878049 1.186995575 1.090814395 1.185688401 1.045392357 1.115060002 1.05405102 1.053998268 1 12.19273702 -9.779019505 8.268140823 1.000042103 1.0859019 0.1424688 0.060853824 0 0 0.060119733 0.014581177 1.66E-10 9.779019505 0.085859796 YCHDLGER ddPTM_A459_MK2206_30min_R2 3 YCHDLGER 8 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 0 ;; 149.65 0.0019605 9589000 55293 68048 61124 72117 66012 72377 67723 52009 57011 68777 FALSE TRUE 59526.27459 64668.83527 63161.84365 66224.81041 63420.0372 75131.35745 58830.88875 58806.75487 61969.71373 66532.81212 0.894690495 0.971984096 0.949333744 0.995370679 0.953214439 1.129237666 0.884238722 0.883875985 0.93141582 1 16.02177839 -10.48765109 4.095636982 1.000002157 0.957274714 0.036831413 0.068282916 15670281.31 8025927.078 316.3483836 0.017040552 3.25E-11 10.48765109 -0.042727442 YCLGNKCYLQT(ph)DSIAYWNATR ddPTM_A459_MK2206_30min_R1 1 YCLGNKCYLQTDSIAYWNATR 21 1 P55344 P55344 LIM2 Lens fiber membrane intrinsic protein 1 YCLGNKCYLQT(0.495)DS(0.495)IAY(0.005)WNAT(0.004)R 60.618 0.02714 8360300 621.42 777.7 542.98 571.76 549.72 646.39 566.79 461.12 769.1 480.18 TRUE FALSE 568.5649658 727.0715886 506.1240304 615.7970543 527.8234883 682.9880432 528.9804733 457.0884765 849.0506973 539.6683236 1.053545189 1.347256374 0.937842761 1.141065776 0.978051639 1.265570005 0.98019552 0.84698037 1.573282441 1 9.075929199 -5.261339624 24.99999854 1.085029605 1.200400763 0.043072179 0.206217065 29.25064474 7327521.389 0.050333888 0.117391663 5.48E-06 5.261339624 0.115371158 YCRPESQEHPEADPGSAAPY(ph)LK ddPTM_A459_MK2206_30min_R2 1 YCRPESQEHPEADPGSAAPYLK 22 1 G8JLH9;P40763;P40763-3 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 1 YCRPESQEHPEADPGS(0.124)AAPY(0.876)LK 73.758 0.043419 0 12075 17934 14702 19227 14061 11448 18776 13535 10668 18104 TRUE FALSE 12999.47128 17043.42364 15192.15734 17656.0926 13508.89449 11883.66166 16310.68865 15304.07097 11595.88336 17513.26796 0.742264169 0.973172093 0.867465591 1.008155225 0.771352013 0.678551923 0.931333243 0.873855811 0.662119907 1 14.09616069 -6.295111921 24.99014884 0.811768984 0.90098643 0.093571385 0.11763027 1389.417369 1031155.442 0.035603077 0.040371983 5.07E-07 6.295111921 0.089217447 YCYPLIGSMTYS(ph)VK ddPTM_A459_MK2206_30min_R1 1 YCYPLIGSMTYSVK 14 0 Q6UWF7-2;Q6UWF7 Q6UWF7-2 NXPE4 NXPE family member 4 1 YCYPLIGS(0.173)MT(0.116)Y(0.125)S(0.586)VK 71.545 0.036005 3952600 1682.7 1508.4 1835.6 1779.7 2516.5 1924.8 1861.6 2342.3 1215.5 824.09 TRUE FALSE 1539.577529 1410.202886 1711.004586 1916.772802 2416.262476 2033.780513 1737.416061 2321.821518 1341.855575 926.1844908 1.662279539 1.522593932 1.847369075 2.069536708 2.608834957 2.195869757 1.875885504 2.506867197 1.448799443 1 9.855155789 -5.502517601 3.39373781 2.052487732 1.597134058 0.065614126 0.452983762 0.45155512 10.75702047 0.118692785 0.252073481 3.14E-06 5.502517601 -0.455353673 YDDYRDYDS(ph)PER ddPTM_A459_MK2206_30min_R1 1 YDDYRDYDSPER 12 1 P52756;C9JR02;C9J9P7;C9JFQ5;P52756-4;P52756-2;P52756-5;F8W910;P52756-3 P52756 RBM5 RNA-binding protein 5 1 YDDYRDYDS(1)PER 198.37 0.00060468 7318200 1797.2 1819.2 2005 1281.9 1584.8 1529.6 1900.9 1702.5 1793.5 2033.8 TRUE FALSE 1644.338703 1700.769749 1868.906186 1380.63216 1521.67406 1616.20463 1774.094429 1687.615222 1979.940743 2285.762498 0.719383008 0.744071071 0.81762921 0.60401383 0.665718359 0.707074611 0.776149941 0.738316086 0.866205804 1 11.15845979 -8.521448749 1.198999571 1.000956655 0.713164313 0.73435465 0.054230221 0.274711082 0.86614864 0.054794074 0.017149252 3.01E-09 8.521448749 -0.287792342 YDDYS(ph)SSRDGYGGSR ddPTM_A459_MK2206_30min_R1 1 YDDYSSSRDGYGGSR 15 1 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 1 YDDYS(0.706)S(0.147)S(0.147)RDGYGGSR 125.33 0.0058799 18816000 2915.9 3022.8 4006.8 3941.2 4147.7 2882.9 3525.8 3297.6 2563 1894 TRUE FALSE 2667.887393 2826.015171 3734.82958 4244.751907 3982.488326 3046.127307 3290.600315 3268.769431 2829.433022 2128.643019 1.253327763 1.327613482 1.754558912 1.99411168 1.870904746 1.43101839 1.545867619 1.535611844 1.32921913 1 11.05571831 -8.589021711 1.017483006 0.99978118 1.622904206 0.420408228 0.218563316 0.688304604 1.543128716 0.235671014 0.07744061 2.58E-09 8.589021711 0.623123025 YDDYSSSR ddPTM_A459_MK2206_30min_R2 3 YDDYSSSR 8 0 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 "RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1" 0 ;; 148.99 0.020634 82928000 349152 437524 368720 421095 395425 468726 432591 342522 327434 386676 FALSE TRUE 375883.3456 415797.1944 381012.9408 386690.1915 379898.6276 486563.6964 375791.2821 387290.8015 355913.6175 374058.7938 1.004877714 1.111582461 1.018591053 1.033768482 1.015612075 1.300767966 1.004631593 1.035374139 0.951491111 1 18.51290552 -7.474027744 24.99996985 1.000058983 1.080856343 0.193208991 0.083087314 683.839068 349961.9108 0.035360719 0.023839627 3.36E-08 7.474027744 0.08079736 YDEELEGERPHSFR ddPTM_A459_MK2206_30min_R2 2 YDEELEGERPHSFR 14 1 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 0 ; 74.46 0.03688 13451100 99015 123440 110456 125749 126454 124008 123746 104696 103159 106394 FALSE TRUE 106595.6645 117310.1491 114138.5479 115474.9044 121488.7806 128727.2113 107498.0016 118380.1267 112131.5834 102922.3725 1.035689928 1.139792508 1.108977039 1.12196116 1.180392345 1.250721376 1.044457089 1.150188475 1.08947725 1 16.65119709 -8.804927639 1.366703752 0.999837435 1.132871337 0.303490946 0.058833747 1.267712925 4.060443774 0.057046992 0.016911181 1.57E-09 8.804927639 0.133033903 YDEFHDYLER ddPTM_A459_MK2206_30min_R1 1 YDEFHDYLER 10 0 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 0 110.08 0.0136 2906300 1893 2196.2 2291.8 1881.7 2121.9 1940.8 2271.1 2094.1 1763.1 1880.9 FALSE TRUE 1731.990409 2053.226981 2136.239001 2026.62886 2037.38023 2050.686419 2119.599063 2075.791504 1946.380554 2113.920092 0.819326339 0.971288834 1.010558067 0.958706466 0.963792452 0.970087009 1.002686464 0.981963089 0.920744621 1 11.04570513 -4.762112693 6.620021143 0.976119815 0.815247144 0.784036611 0.024606341 0.051193947 11.12765928 0.006046458 0.03719356 1.73E-05 4.762112693 -0.160872671 YDEIFYNLAPADGKLS(ph)GSK ddPTM_A459_MK2206_30min_R1 2 YDEIFYNLAPADGKLSGSK 19 1 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 YDEIFYNLAPADGKLS(0.793)GS(0.207)K;YDEIFYNLAPADGKLS(0.75)GS(0.25)K 122.39 0.00023153 239190000 10065.3 12341.4 12477.4 9850.5 7593.7 7109.2 9421.9 9497 10873 11472.7 TRUE FALSE 9209.19338 11537.97262 11630.46885 10609.18722 7291.226849 7511.71676 8793.382242 9413.96873 12003.28726 12894.02469 0.714221789 0.89483097 0.902004543 0.822798736 0.565473312 0.582573474 0.68197343 0.730103203 0.930918588 1 13.65441503 -10.49215535 8.235658411 1.000000001 0.7545427 0.259031589 0.122475771 2.06E-09 2.39E-10 0.132056507 0.032028407 3.22E-11 10.49215535 -0.245457301 YDERPGPS(ph)PLPHR ddPTM_A459_MK2206_30min_R1 2 YDERPGPSPLPHR 13 1 P08621;P08621-4 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 Y(0.001)DERPGPS(0.999)PLPHR;YDERPGPS(1)PLPHR 109.1 0.0033265 1070080000 11336.6 10734.2 11793.8 10461.1 12097.2 10977.2 12694.7 10875.3 10611.1 9199 TRUE FALSE 10372.36264 10035.40163 10993.26972 11266.81573 11615.34291 11598.71958 11847.85973 10780.2184 11714.16182 10338.64157 1.003261654 0.970669267 1.063318584 1.089777188 1.123488306 1.121880423 1.145978381 1.042711301 1.133046517 1 13.33575902 -5.445272317 2.866026327 1.099995934 0.986381779 0.486040166 0.042833651 0.199380889 3.158877925 0.011270529 0.026775434 3.59E-06 5.445272317 -0.113614155 YDERPGPS(ph)PLPHR ddPTM_A459_MK2206_30min_R2 2 YDERPGPSPLPHR 13 1 P08621;P08621-4 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 Y(0.002)DERPGPS(0.998)PLPHR;Y(0.022)DERPGPS(0.978)PLPHR 72.523 0.030028 1040470000 245161 313378 289824 340148 318913 315037 325234 266933 290518 285290 TRUE FALSE 263930.7147 297816.1042 299486.5875 312356.8203 306390.8732 327025.9538 282530.3851 301822.0596 315786.7305 275981.0107 0.956336503 1.079118101 1.085170993 1.13180548 1.110188243 1.184958172 1.02373125 1.093633431 1.144233546 1 18.07420948 -4.625848848 2.092214942 1.102460209 0.866218998 0.393410317 0.051545415 1.195418296 4.024501646 0.013176222 0.622366883 2.37E-05 4.625848848 -0.236241211 YDGES(ph)DKEQFDDDQK ddPTM_A459_MK2206_30min_R2 1 YDGESDKEQFDDDQK 15 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 Y(0.001)DGES(0.999)DKEQFDDDQK 120.7 0.0088867 0 11519 7376.2 8075.5 5522.6 5181.7 2733 10153 9784.9 3682.5 12595 TRUE FALSE 12400.9035 7009.908634 8344.733139 5071.385914 4978.240422 2837.00623 8819.898904 11063.82003 4002.797194 12184.02618 1.017800135 0.575335979 0.684891268 0.416232355 0.408587469 0.232846367 0.723890344 0.908059443 0.328528282 1 13.57270333 -10.41924866 7.309376612 1.000000004 0.583481122 0.210586042 0.238862895 1.42E-08 1.93E-09 0.236619571 0.057388675 3.81E-11 10.41924866 -0.416518881 YDGSTIVPGEQGAEYQHFIQQCTDDVR ddPTM_A459_MK2206_30min_R1 2 YDGSTIVPGEQGAEYQHFIQQCTDDVR 27 0 Q14019 Q14019 COTL1 Coactosin-like protein 0 ; 104.77 3.56E-09 7682100 956.29 1171.06 1512.69 1348.34 1478.41 1562.64 1609.13 1530.95 1134.77 1215.88 FALSE TRUE 874.9525138 1094.823781 1410.012817 1452.18938 1419.521799 1651.115326 1501.787874 1517.565066 1252.733402 1366.512394 0.640281433 0.801181011 1.031833172 1.062697555 1.038791749 1.208269558 1.098993233 1.110538823 0.916737681 1 10.41628283 -5.067384942 1.782022732 1.075431639 0.601844093 0.789036188 0.072168476 0.22149095 1.062108833 0.020567561 0.147026626 8.56E-06 5.067384942 -0.473587546 YDHQAEEDLR ddPTM_A459_MK2206_30min_R2 2 YDHQAEEDLR 10 0 Q15417-3;Q15417 Q15417-3 CNN3 Calponin-3 0 ; 102.05 0.022068 13691200 123861 121885 126753 131296 117386 114040 133659 118525 95927 131809 FALSE TRUE 133343.8934 115832.3681 130978.8818 120568.6968 112776.8358 118379.8721 116109.4127 134016.6245 104270.5571 127508.0831 1.045768159 0.90843157 1.027220224 0.945576891 0.88446813 0.928410727 0.910604331 1.051044147 0.817756447 1 16.96022918 -4.749166579 24.50752569 0.942745685 1.045768465 0.183119601 0.066019074 771.2908558 1540067.235 0.015471344 0.254939264 1.78E-05 4.749166579 0.10302278 YDIPATAATATS(ph)PTPNPVPSVPANPPK ddPTM_A459_MK2206_30min_R2 1 YDIPATAATATSPTPNPVPSVPANPPK 27 0 P51610;A6NEM2;P51610-4;P51610-3 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 YDIPATAAT(0.004)AT(0.057)S(0.469)PT(0.469)PNPVPSVPANPPK 89.201 2.45E-05 5933500 68104 77714 82213 84200 82359 77788 91655 71701 70217 88589 TRUE FALSE 73318.0946 73854.83577 84953.94039 77320.59066 79125.17184 80748.27685 79620.5884 81072.56689 76324.34774 85698.34819 0.855536847 0.861799992 0.991313627 0.902241318 0.923298681 0.942238428 0.929079616 0.946022515 0.890616323 1 16.38697978 -1.522878745 0.04774169 1.11918091 0.574238011 0.352526206 0.037131737 680.3027733 2.466182525 6.869640172 27.83077482 0.03 1.522878745 -0.544942899 YDIPATAATATSPT(ph)PNPVPSVPANPPK ddPTM_A459_MK2206_30min_R2 1 YDIPATAATATSPTPNPVPSVPANPPK 27 0 P51610;A6NEM2;P51610-4;P51610-3 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 YDIPATAATAT(0.014)S(0.053)PT(0.933)PNPVPSVPANPPK 109.84 1.67E-09 6034700 64352 71612 74963 81610 77035 66927 80784 63975 66643 81758 TRUE FALSE 69278.8386 68055.85221 77462.22901 74942.20194 74010.21883 69473.95388 70176.96376 72336.75216 72439.48768 79090.24316 0.875946714 0.860483538 0.97941574 0.94755306 0.935769267 0.87841371 0.887302415 0.914610314 0.91590928 1 16.27121211 -9.020894426 2.371234875 0.999998449 0.911031328 0.374590362 0.034709347 9.304692766 42.8580479 0.036420977 0.00986071 9.53E-10 9.020894426 -0.088967121 YDLANQDHMMDAPPLS(ph)PFPHIK ddPTM_A459_MK2206_30min_R1 2 YDLANQDHMMDAPPLSPFPHIK 22 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK 118.02 1.73E-05 39230000 11535.8 12643.8 14001.2 11531.8 11810 11553 12354.9 12471.3 11637.9 11551.3 TRUE FALSE 10554.61963 11820.68632 13050.83755 12419.98123 11339.58269 12207.12088 11530.72716 12362.26474 12847.70135 12982.36225 0.812996851 0.91051891 1.005274487 0.956681149 0.873460659 0.94028503 0.888184056 0.952235387 0.989627396 1 13.6642653 -1.52287878 0.062376035 1.091599713 0.592223545 0.302915663 0.048942471 504.6635979 2.35464036 3.691941599 22.68978354 0.029999998 1.52287878 -0.499376168 YDLANQDHMMDAPPLS(ph)PFPHIK ddPTM_A459_MK2206_30min_R2 4 YDLANQDHMMDAPPLSPFPHIK 22 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;Y(0.002)DLANQDHMMDAPPLS(0.998)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK 100.28 7.14E-05 13915000 71813.8 78187 67484.5 80541.1 94277 75708 99444 67734.2 79339.5 95887 TRUE FALSE 77311.91974 74304.34727 69734.39955 73960.63449 90575.21128 78589.12099 86386.88335 76587.29251 86240.3063 92758.21504 0.833477873 0.801054087 0.751786777 0.797348617 0.976465656 0.847247017 0.931312481 0.825665872 0.929732275 1 16.50118744 -6.193125094 10.07633593 0.906740725 0.792937118 0.554697927 0.053126316 0.468989926 67.42307772 0.014986019 0.019356115 6.41E-07 6.193125094 -0.113803607 YDPLTGTWTSVAAMS(ph)TR ddPTM_A459_MK2206_30min_R1 1 YDPLTGTWTSVAAMSTR 17 0 Q0VGE6;Q6TDP4 Q0VGE6 KLHL17 Kelch-like protein 17 1 YDPLT(0.001)GT(0.044)WT(0.044)S(0.044)VAAMS(0.73)T(0.137)R 71.031 0.030631 4859800 188.33 191.94 306.83 151.25 159.02 246.3 363.13 226.38 371.73 271.76 TRUE FALSE 172.3115445 179.4446711 286.0032345 162.8993012 152.6858967 260.2452932 338.9062603 224.4007835 410.3726637 305.4276805 0.564164794 0.587519346 0.93640247 0.533348192 0.49990851 0.852068459 1.109612134 0.734710041 1.343600106 1 8.254687007 -6.981143765 4.989854626 1.021176921 0.635628139 0.550804365 0.179371588 0.15209609 10.37373016 0.064876515 0.054987099 1.04E-07 6.981143765 -0.385548782 YDSYESCDSR ddPTM_A459_MK2206_30min_R2 1 YDSYESCDSR 10 0 V9GZ50;Q9ULX6;M0R1Y5;M0R010;M0QYT7 V9GZ50 AKAP8L A-kinase anchor protein 8-like 0 152.06 0.0089769 3432900 8441.6 13783 11914 15149 12840 11253 11441 11090 17076 13538 FALSE TRUE 9087.895386 13098.55626 12311.20681 13911.27824 12335.83708 11681.2408 9938.782957 12539.50108 18561.23961 13096.25617 0.69393079 1.00017563 0.940055437 1.062233211 0.941936148 0.891952681 0.758902608 0.957487462 1.417293567 1 13.67686683 -8.089683858 8.06845542 1.205655543 0.907948121 0.43976335 0.137804993 0.28364239 22.96157989 0.090220443 0.033915749 8.13E-09 8.089683858 -0.297707422 YEAVS(ph)PERLELER ddPTM_A459_MK2206_30min_R1 1 YEAVSPERLELER 13 1 Q92585 Q92585 MAML1 Mastermind-like protein 1 1 YEAVS(1)PERLELER 123.1 0.01196 8406400 3937.4 4290.1 4142 4231.9 4495.1 4782.1 4460.2 4225.9 3575.4 3032.6 TRUE FALSE 3602.503454 4010.81371 3860.85258 4557.841671 4316.050648 5052.858369 4162.668196 4188.953402 3947.075625 3408.301383 1.056979137 1.17677789 1.132779102 1.337276596 1.2663348 1.48251513 1.221332191 1.229044304 1.158077054 1 11.7348372 -5.710071218 11.90396992 1.261771051 1.127467108 0.159965837 0.119941848 1.256848179 287.4468036 0.032117714 0.055602332 1.95E-06 5.710071218 -0.134303943 YEAVS(ph)PERLELER ddPTM_A459_MK2206_30min_R2 1 YEAVSPERLELER 13 1 Q92585 Q92585 MAML1 Mastermind-like protein 1 1 YEAVS(1)PERLELER 72.428 0.030186 8848400 11322 13081 9560.1 12697 12934 12068 11156 10237 11461 11028 TRUE FALSE 12188.82103 12431.41656 9878.828963 11659.61448 12426.14617 12527.2562 9691.203799 11575.01105 12457.85706 10668.15726 1.142542308 1.165282462 0.926010811 1.092936127 1.164788432 1.174266172 0.90842341 1.085005663 1.167760913 1 13.38102338 -12.09777791 1.834527785 8.34E-05 1.088169474 0.078988122 0.093358223 1857037.2 70283.22418 7771411.728 0.024030918 7.98E-13 12.09777791 1.088086088 YEDDGIS(ph)DDEIEGK ddPTM_A459_MK2206_30min_R2 1 YEDDGISDDEIEGK 14 0 I3VM54;Q9Y2K7-3;Q9Y2K7 I3VM54 KDM2A Lysine-specific demethylase 2A 1 YEDDGIS(1)DDEIEGK 176.75 6.96E-05 5861500 64624 42210 45040 48346 43545 38302 54018 51089 36480 61392 TRUE FALSE 69571.66313 40113.91278 46541.61112 44395.97715 41835.2045 39759.60945 46925.37171 57766.50771 39652.96446 59388.78407 1.171461316 0.675445935 0.783676781 0.747548175 0.704429383 0.669480106 0.790138617 0.972683792 0.667684397 1 15.85790287 -10.11374654 20.79599834 0.999999998 0.790913185 0.135850406 0.151833588 0 0 0.141499222 0.034318602 7.70E-11 10.11374654 -0.209086813 YEDKPEPEVDALGS(ph)PPALLK ddPTM_A459_MK2206_30min_R1 3 YEDKPEPEVDALGSPPALLK 20 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK 168.25 1.49E-09 74086100 19013.6 19268.5 18660.4 14353.2 13966.6 12077.5 14912.3 13391.9 16151.1 15308.1 TRUE FALSE 17396.39348 18014.11715 17393.78404 15458.68595 13410.28075 12761.31761 13917.52768 13274.81603 17830.06464 17204.583 1.011148801 1.047053401 1.01099713 0.898521397 0.779459796 0.741739432 0.80894304 0.771586038 1.036355525 1 14.0705053 -5.848289179 3.167913181 0.836841003 1.028901722 0.3859096 0.092100959 0.22363696 4.481606562 0.026719142 0.043452037 1.42E-06 5.848289179 0.192060719 YEDKPEPEVDALGS(ph)PPALLK ddPTM_A459_MK2206_30min_R2 3 YEDKPEPEVDALGSPPALLK 20 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK 131.27 8.67E-05 44835100 81336 84229 78144 71175 66817 47302 77370 55820 51230 65843 TRUE FALSE 87563.1467 80046.31034 80749.28196 65359.77482 64193.42885 49102.11076 67211.22606 63115.86566 55685.8928 63694.5483 1.374735343 1.256721532 1.267758138 1.026143941 1.00783239 0.77089974 1.055211597 0.990914723 0.874264663 1 15.95888228 -5.795142065 1.874079374 0.944199011 1.321813162 0.79640473 0.079598422 0.147003962 1.054114954 0.02476629 0.048564738 1.60E-06 5.795142065 0.377614151 YEEVSVSGFEEFHR ddPTM_A459_MK2206_30min_R1 1 YEEVSVSGFEEFHR 14 0 I3L0K2;I3L3M7;I3L2R6;Q9BRA2 I3L0K2 TXNDC17 Thioredoxin domain-containing protein 17 0 208.68 8.14E-06 4674300 2248.9 1918 1616.8 1805.4 2391.9 2128.3 1901.3 1808.4 1539.3 1621.3 FALSE TRUE 2057.619246 1793.137851 1507.056121 1944.452221 2296.625558 2248.802507 1774.467746 1792.589349 1699.315743 1822.158884 1.129220544 0.98407327 0.827071741 1.06711453 1.260387103 1.234141834 0.973827124 0.983772252 0.932583738 1 10.83143305 -7.462349835 24.99887421 0.970665064 1.077193485 0.179041512 0.116067167 519.3223095 214483.785 0.055917639 0.037699596 3.45E-08 7.462349835 0.106528422 YEGNQSNDYISPMCS(ph)CSSECIHK ddPTM_A459_MK2206_30min_R2 1 YEGNQSNDYISPMCSCSSECIHK 23 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 "FYVE, RhoGEF and PH domain-containing protein 6" 1 YEGNQSNDYISPMCS(0.37)CS(0.261)S(0.37)ECIHK 110.01 1.07E-05 4191300 6973.2 8037.2 5514.5 8157.7 7363.6 6992.4 7448.1 6876.8 6925.3 6822.1 TRUE FALSE 7507.073553 7638.084335 5698.350678 7491.189815 7074.468065 7258.500682 6470.155523 7775.621372 7527.650076 6599.495436 1.137522349 1.157373986 0.863452477 1.135115538 1.071971052 1.099856914 0.980401545 1.178214524 1.140640243 1 12.68814001 -7.778274768 24.99994122 1.11957048 1.064032728 0.036805173 0.092692644 753.8492118 1119421.922 0.04963657 0.023946663 1.67E-08 7.778274768 -0.055537752 YELISETGGSHDKR ddPTM_A459_MK2206_30min_R2 2 YELISETGGSHDKR 14 1 Q12906-7;Q12906-4;Q12906-6;Q12906;Q12906-5;Q12906-2;Q12906-3;Q96SI9-2;Q96SI9 Q12906-7 ILF3;STRBP Interleukin enhancer-binding factor 3;Spermatid perinuclear RNA-binding protein 0 ; 81.239 0.02181 9622200 108622 128795 120362 155303 136558 142189 154144 129561 114993 123460 FALSE TRUE 116938.1838 122399.2276 124374.809 142614.2481 131196.0468 147600.102 133904.7076 146495.0675 124994.8833 119431.5103 0.979123378 1.024848696 1.041390238 1.194109057 1.09850446 1.23585561 1.121184077 1.226603157 1.04658212 1 16.865824 -5.616268296 5.16266291 1.143481632 1.008937296 0.354621974 0.071961418 0.190056603 8.203031816 0.018332288 0.032496978 2.42E-06 5.616268296 -0.134544336 YEPQS(ph)PGYEPR ddPTM_A459_MK2206_30min_R1 3 YEPQSPGYEPR 11 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 YEPQS(1)PGYEPR;YEPQS(1)PGYEPR;YEPQS(1)PGYEPR 195.94 2.06E-05 126007600 7193.91 7792.8 7268.96 5866.08 7798.5 7493.1 7856.1 6254.5 5703.6 4981.28 TRUE FALSE 6582.030178 7285.487304 6775.563248 6317.886498 7487.869231 7917.352847 7332.033903 6199.817566 6296.509631 5598.398573 1.175698745 1.301352022 1.210268108 1.128516738 1.33750199 1.414217431 1.309666293 1.107426969 1.124698349 1 12.45079849 -7.832786526 5.59641658 1.081416893 1.269982537 0.52575354 0.083194923 0.187890438 10.4649157 0.050694297 0.024050205 1.47E-08 7.832786526 0.188565644 YEQGTGCWQGPNR ddPTM_A459_MK2206_30min_R2 1 YEQGTGCWQGPNR 13 0 K7ELL7;P14314-2;P14314;A0A0C4DGP4 K7ELL7 PRKCSH Glucosidase 2 subunit beta 0 140.24 0.015883 0 6283 6303 1882 5046.9 7099.2 5451.9 4696.6 4261.3 4870 5832.5 FALSE TRUE 6764.031311 5990.002185 1944.744941 4634.552126 6820.449737 5659.375875 4079.930778 4818.266541 5293.583797 5642.186003 1.198831678 1.061645643 0.344679339 0.82141073 1.208831069 1.003046669 0.723111712 0.853971588 0.938215045 1 12.46203851 -5.012073181 24.81281516 0.856549846 1.164535416 0.213387135 0.213317913 764.8612419 1571967.944 0.056966289 0.172092391 9.73E-06 5.012073181 0.30798557 YES(ph)ASMSSTCEPCK ddPTM_A459_MK2206_30min_R2 1 YESASMSSTCEPCK 14 0 A0A5H1ZRS1;Q15154-5;Q15154;H0YBA1 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 YES(0.994)AS(0.006)MSSTCEPCK 146.96 0.00025744 0 19413 18100 17432 19523 15972 15079 17158 15344 12442 19841 TRUE FALSE 20899.27421 17201.18032 18013.17418 17927.90845 15344.85903 15652.84191 14905.13399 17349.51348 13524.18267 19193.58979 1.088867399 0.896194016 0.938499487 0.934057081 0.799478325 0.815524458 0.776568331 0.903922282 0.704619762 1 14.22833694 -1.522878745 0.553723048 0.829695976 11.94624334 0.423978888 0.082083032 124.0386595 1.122742283 0.038290495 1642.30124 0.03 1.522878745 11.11654737 YES(ph)SEIR ddPTM_A459_MK2206_30min_R2 2 YESSEIR 7 0 A6PWM2;Q6UXH1-3;Q6UXH1-2;Q6UXH1-4;Q6UXH1;Q6UXH1-6;Q6UXH1-5 A6PWM2 CRELD2 Cysteine-rich with EGF-like domain protein 2 1 YES(0.661)S(0.339)EIR;YES(0.672)S(0.328)EIR 90.601 0.029436 60349000 117340 158160 139509 148957 132697 116233 135525 113229 122101 129039 TRUE FALSE 126323.6406 150306.0044 144160.1604 136786.7366 127486.649 120656.3283 117730.4047 128028.4191 132721.1243 124828.468 1.011977818 1.204100369 1.154866055 1.095797608 1.02129467 0.966577017 0.943137464 1.025634786 1.063228015 1 16.92958746 -6.22106794 2.861262978 0.997662543 1.130831286 0.516363767 0.054199975 0.20978746 3.425271776 0.017621745 0.022732273 6.01E-07 6.22106794 0.133168744 YESGPDGGEEDGT(ph)GSLKR ddPTM_A459_MK2206_30min_R1 1 YESGPDGGEEDGTGSLKR 18 1 Q07866-6;G3V5R9;G3V3H3 Q07866-6 KLC1 Kinesin light chain 1 1 YESGPDGGEEDGT(0.955)GS(0.045)LKR 94.234 0.005383 14064000 3708.9 3460.5 2986.5 2472.1 2186.4 2139.7 2673.9 2716.3 2405.4 2232.6 TRUE FALSE 3393.438579 3235.220821 2783.784701 2662.50157 2099.311058 2260.847965 2495.52901 2692.551675 2655.449938 2509.191343 1.35240327 1.289347992 1.109435001 1.061099456 0.836648454 0.901026528 0.994555085 1.073075468 1.058289136 1 11.29300678 -5.384672788 1.670999702 0.979444554 1.357405657 0.792808163 0.068001525 0.209365132 1.054909641 0.023095996 0.08588743 4.12E-06 5.384672788 0.377961102 YESGPDGGEEDGTGS(ph)LKR ddPTM_A459_MK2206_30min_R1 1 YESGPDGGEEDGTGSLKR 18 1 Q07866-6;G3V5R9;G3V3H3 Q07866-6 KLC1 Kinesin light chain 1 1 YESGPDGGEEDGT(0.006)GS(0.994)LKR 87.963 0.0034299 4317500 1213.1 1229.4 1281.9 986.79 980.95 780.27 1244.3 1105.4 933.04 836.4 TRUE FALSE 1109.919475 1149.365837 1194.8882 1062.792737 941.8766843 824.4482131 1161.295017 1095.735604 1030.032847 940.0195465 1.180740846 1.222704188 1.271131227 1.130607061 1.001975637 0.87705433 1.235394542 1.165651936 1.095756839 1 9.876546946 -5.959641116 5.431752362 1.069738184 1.223029219 0.372973876 0.093858356 0.229615059 16.67584227 0.02923969 0.04330752 1.10E-06 5.959641116 0.153291034 YESGPDGGEEDGTGS(ph)LKR ddPTM_A459_MK2206_30min_R2 2 YESGPDGGEEDGTGSLKR 18 1 Q07866-6;G3V5R9;G3V3H3 Q07866-6 KLC1 Kinesin light chain 1 1 YESGPDGGEEDGT(0.022)GS(0.978)LKR;YESGPDGGEEDGT(0.104)GS(0.896)LKR 77.469 0.0070546 14509800 57463 54560 51484 45120 46168 39302 46732 36538 38271 47234 TRUE FALSE 61862.41146 51850.62974 53200.45086 41433.55167 44355.21234 40797.66515 40596.03226 41313.64205 41599.7424 45692.75845 1.353877804 1.134766897 1.164308146 0.906785956 0.970727394 0.892869385 0.888456588 0.904161698 0.910423091 1 15.47967792 -5.074710238 0.856242229 0.90863453 1.458320299 0.854922832 0.056426418 0.531514109 0.406815127 0.02014594 0.253152697 8.42E-06 5.074710238 0.549685769 YESLTDPSK ddPTM_A459_MK2206_30min_R1 2 YESLTDPSK 9 0 P07900;P07900-2;G3V2J8;P08238;Q58FF7;Q58FF6;Q58FF8 P07900;P08238;Q58FF6;Q58FF8 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Putative heat shock protein HSP 90-beta 2 0 ; 143.7 0.027844 13591900 9794.3 9525.9 8668.3 8312.1 7898.3 8868.3 10162.6 8607.3 9145.5 10628.5 FALSE TRUE 8961.243353 8905.762179 8079.919947 8952.299382 7583.693986 9370.415482 9484.671497 8532.047284 10096.20745 11945.23882 0.750193737 0.745549111 0.676413429 0.749444989 0.634871692 0.78444773 0.794012714 0.714263433 0.845207668 1 13.54414808 -8.904572349 0.703169128 1.004718908 0.720002294 0.762747224 0.046433304 0.63506429 0.579893981 0.049447175 0.017340337 1.25E-09 8.904572349 -0.284716614 YESLTDPSKLDSGK ddPTM_A459_MK2206_30min_R1 1 YESLTDPSKLDSGK 14 1 P07900;P07900-2;G3V2J8;P08238;Q58FF7;Q58FF8 P07900;P08238;Q58FF8 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 0 108.23 0.013954 40313000 8193.2 8735.2 8861.5 8920.8 8634 7892.1 7486.6 9549 6890.4 5904.1 FALSE TRUE 7496.325316 8166.536892 8260.00607 9607.881562 8290.089497 8338.943882 6987.182574 9465.5141 7606.681738 6635.544482 1.129722713 1.230725966 1.244812101 1.447941701 1.24934578 1.256708309 1.052993103 1.426486421 1.146353816 1 12.69599914 -7.033672045 24.90669304 1.186691987 1.266858985 0.116464797 0.128667598 1704.557557 1260830.433 0.048883699 0.037891035 9.25E-08 7.033672045 0.080166998 YESLTDPSKLDSGK ddPTM_A459_MK2206_30min_R2 1 YESLTDPSKLDSGK 14 1 P07900;P07900-2;G3V2J8;P08238;Q58FF7;Q58FF8 P07900;P08238;Q58FF8 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 0 109.15 0.013135 19738000 126030 171550 161310 157320 197050 151030 200820 129460 164070 157140 FALSE TRUE 135678.9537 163031.0765 166687.9949 144466.4528 189312.8269 156777.5525 174452.0928 146380.8665 178340.512 152012.5347 0.892551091 1.072484429 1.096541119 0.950358818 1.245376424 1.031346216 1.147616499 0.962952607 1.173196095 1 17.21383076 -4.761700687 6.645709163 1.077614659 0.887767119 0.273437676 0.089467695 0.147464134 32.59273099 0.020509501 0.126754633 1.73E-05 4.761700687 -0.18984754 YESQEPLAGQES(ph)PLPLATR ddPTM_A459_MK2206_30min_R1 5 YESQEPLAGQESPLPLATR 19 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR 256.66 4.15E-47 480504000 22367.1 22632.6 23069 18910.7 23493.7 20966.5 24143 20536.6 19875.4 18169.1 TRUE FALSE 20464.66069 21159.21363 21503.14055 20367.20539 22557.89618 22153.60511 22532.46452 20357.05067 21941.51895 20420.02528 1.002185865 1.036199189 1.053041819 0.997413329 1.104694822 1.084896067 1.103449394 0.996916037 1.074509882 1 14.31769703 -4.444961918 0.823805191 1.058182817 0.944408524 0.124932617 0.039707608 8.161174637 2.922881867 0.014645397 0.963421338 3.59E-05 4.444961918 -0.113774293 YESQEPLAGQES(ph)PLPLATR ddPTM_A459_MK2206_30min_R2 6 YESQEPLAGQESPLPLATR 19 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 YESQEPLAGQES(0.968)PLPLAT(0.032)R;YESQEPLAGQES(0.87)PLPLAT(0.13)R;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(0.998)PLPLAT(0.002)R 196.83 3.05E-15 404714900 413914.5 446450 428528 481807 481592 439792.6 480035 356069.6 396579 452307 TRUE FALSE 445604.1124 424279.9422 442814.9096 442441.8269 462682.2783 456529.2156 417005.8279 402609.1193 431072.7246 437548.2596 1.018411347 0.969675762 1.012036729 1.011184063 1.057442849 1.043380257 0.953051049 0.920147916 0.98520041 1 18.73908262 -7.27432723 24.67461731 0.957945497 1.017578747 0.443298209 0.029301681 609.2625329 1166467.588 0.012881286 0.008753709 5.32E-08 7.27432723 0.059633249 YET(ph)SSTSAGDRY(ph)DS(ph)LLGR ddPTM_A459_MK2206_30min_R1 1 YETSSTSAGDRYDSLLGR 18 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;H0YIM2;H0YIS3 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 3 Y(0.274)ET(0.723)S(0.002)STSAGDRY(1)DS(1)LLGR 94.639 0.010763 0 210.65 141.27 214.95 190.1 177.34 122.98 147.02 143.92 92.601 0 TRUE FALSE 192.7331113 132.0732973 200.3597929 204.7415349 170.2761723 129.9430213 137.2125641 142.6617226 102.2272053 0 0 YETPSDAIEVIS(ph)PASSPAPPQEK ddPTM_A459_MK2206_30min_R1 2 YETPSDAIEVISPASSPAPPQEK 23 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 YETPSDAIEVIS(1)PASSPAPPQEK;YETPSDAIEVIS(1)PASSPAPPQEK 158.2 1.06E-09 9099300 4461.1 4643 4932.7 3775.8 4267.5 3803.9 5060.1 4511.4 4942.2 4861.9 TRUE FALSE 4081.660019 4340.739856 4597.882067 4066.61277 4097.516438 4019.273531 4722.549962 4471.957305 5455.959376 5464.228877 0.746978231 0.794392027 0.841451222 0.744224457 0.749880089 0.735560977 0.864266499 0.818405928 0.998486611 1 12.4158022 -8.139351622 1.492987498 1.01287106 0.775585105 0.810909353 0.041156554 0.166216011 0.673018485 0.03833722 0.012132847 7.26E-09 8.139351622 -0.237285954 YETPSDAIEVIS(ph)PASSPAPPQEK ddPTM_A459_MK2206_30min_R2 2 YETPSDAIEVISPASSPAPPQEK 23 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 YETPSDAIEVIS(1)PASSPAPPQEK;YETPSDAIEVIS(1)PASSPAPPQEK 140.57 1.77E-06 4500500 93292 92264 94023 93781 87206 77614 94682 70255 69493 90040 TRUE FALSE 100434.5072 87682.30392 97157.67989 86118.79231 83781.85427 80567.65516 82250.13967 79437.56972 75537.37553 87102.00217 1.153067722 1.006662324 1.115447148 0.988711972 0.961882071 0.924980519 0.944296774 0.912006243 0.867228923 1 16.41041826 -6.042079076 1.424027897 0.924253094 1.090477082 0.675510948 0.047966184 0.235272636 0.964484627 0.016285889 0.027839318 9.08E-07 6.042079076 0.166223988 YEWDVAEAR ddPTM_A459_MK2206_30min_R1 3 YEWDVAEAR 9 0 P13639 P13639 EEF2 Elongation factor 2 0 ;; 159.28 0.012301 52601200 12254 11647.9 12329.7 8755 11016.9 10436.1 12943.4 10705.8 11886.3 12022.8 FALSE TRUE 11211.73295 10889.61959 11492.79432 9429.311617 10578.07354 11026.98296 12079.9694 10612.20032 13121.92342 13512.27523 0.82974427 0.805905697 0.850544717 0.697833004 0.782849177 0.816071518 0.893999656 0.78537479 0.971111319 1 13.721983 -8.337946753 1.15236815 1.008012999 0.799579169 0.633076785 0.052110458 0.303276819 0.841450755 0.049718332 0.016122071 4.59E-09 8.337946753 -0.20843383 YEYDPDIS(ph)PPR ddPTM_A459_MK2206_30min_R1 4 YEYDPDISPPR 11 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 YEYDPDIS(1)PPR;YEYDPDIS(1)PPR;YEYDPDIS(1)PPR;YEYDPDIS(1)PPR 182.41 3.66E-05 108922000 7723.9 8248.4 7917.7 6619.6 7206.5 7068 9270.4 7355.2 9083.3 9251.8 TRUE FALSE 7066.941745 7711.427661 7380.268584 7129.442739 6919.449845 7468.184052 8651.988531 7290.894262 10027.54154 10397.98283 0.679645452 0.741627274 0.709778878 0.685656329 0.665460788 0.718233928 0.832083364 0.701183526 0.964373735 1 13.34401606 -8.299205577 4.8432676 0.993727651 0.718012283 0.85136322 0.044393142 0.076191259 4.328888779 0.042958047 0.011861944 5.02E-09 8.299205577 -0.275715368 YEYDPDIS(ph)PPR ddPTM_A459_MK2206_30min_R2 5 YEYDPDISPPR 11 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 YEYDPDIS(1)PPR;YEYDPDIS(1)PPR;YEYDPDIS(1)PPR;YEYDPDIS(1)PPR;YEYDPDIS(1)PPR 193.49 2.03E-05 99718000 103482.1 115839 116422.2 111936.9 104136.4 114059.4 113961.1 92268.7 88218.9 105953.8 TRUE FALSE 111404.7691 110086.6037 120303.658 102791.2972 100047.4817 118400.0104 98997.87068 104328.5359 95892.02046 102496.5362 1.086912527 1.074051942 1.173733889 1.002875814 0.976105978 1.155161089 0.965865524 1.017873772 0.935563523 1 16.64521563 -6.832140028 0.538160773 0.971594011 1.104410645 0.316329842 0.063212286 1.208245751 0.752455524 0.05657406 0.065966337 1.47E-07 6.832140028 0.132816634 YFAES(ph)DEEEDDVDFAMFN ddPTM_A459_MK2206_30min_R1 2 YFAESDEEEDDVDFAMFN 18 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 YFAES(1)DEEEDDVDFAMFN;YFAES(1)DEEEDDVDFAMFN 205.61 2.59E-11 2439500 1136.7 1513.93 1311.32 1006.92 1772.68 1504.12 1346.36 1185.98 1364.56 1276.33 TRUE FALSE 1040.017696 1415.372882 1222.311252 1084.473153 1702.070402 1589.281975 1256.546781 1175.611102 1506.410895 1434.451396 0.725028188 0.986699783 0.852110608 0.756019448 1.186565405 1.107937138 0.875977244 0.819554504 1.050165171 1 10.48628337 -4.756223536 24.60492221 0.95322664 0.725027748 0.230398931 0.128077495 226.863993 1070049.23 0.033690667 0.27594981 1.75E-05 4.756223536 -0.228198892 YFDDEFTAQSIT(ph)ITPPDR ddPTM_A459_MK2206_30min_R1 1 YFDDEFTAQSITITPPDR 18 0 P31751-2;P31751;M0R0P9;M0R283 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 YFDDEFTAQS(0.013)IT(0.494)IT(0.494)PPDR 302.9 1.85E-95 12882000 978.61 1054.5 1047.3 649.51 1128.5 989.47 1461.7 973.16 1202.2 1601.9 TRUE FALSE 895.3740806 985.8518583 976.2121939 699.5353727 1083.549455 1045.492936 1364.19266 964.6517647 1327.172992 1800.355466 0.497331831 0.547587339 0.542233027 0.388554031 0.601853065 0.580714729 0.757735173 0.535811834 0.737172751 1 10.81406607 -9.579550488 0.264640951 1.16150081 0.465356762 0.771583305 0.077941308 3.248249849 0.348445328 0.629834193 0.131229849 2.63E-10 9.579550488 -0.696144048 down YFDDEFTAQSITIT(ph)PPDR ddPTM_A459_MK2206_30min_R1 2 YFDDEFTAQSITITPPDR 18 0 P31751-2;P31751;M0R0P9;M0R283 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 YFDDEFTAQSIT(0.03)IT(0.97)PPDR;YFDDEFTAQSIT(0.003)IT(0.997)PPDR 276.62 1.19E-55 12991000 3493.59 3398.29 3422.27 2390.63 3319.07 3147.08 4317.07 2754.4 4667.45 5526.21 TRUE FALSE 3196.441825 3177.060703 3189.975847 2574.756737 3186.864414 3325.26495 4029.086137 2730.318571 5152.64813 6210.838616 0.514655431 0.511534899 0.513614351 0.414558628 0.513113383 0.535397095 0.648718537 0.439605461 0.829621964 1 12.60057237 -8.435095982 3.539524557 0.996986998 0.513994929 0.882662508 0.060202599 0.06734573 1.567560939 0.059069009 0.015638035 3.67E-09 8.435095982 -0.48299207 YFDDEFTAQSITIT(ph)PPDR ddPTM_A459_MK2206_30min_R2 4 YFDDEFTAQSITITPPDR 18 0 P31751-2;P31751;M0R0P9;M0R283 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 YFDDEFTAQSIT(0.007)IT(0.993)PPDR;YFDDEFTAQSITIT(1)PPDR;YFDDEFTAQSIT(0.044)IT(0.956)PPDR;YFDDEFTAQSIT(0.001)IT(0.999)PPDR 215.49 2.16E-12 18556300 48525.8 35101.9 39913.1 42576.7 40736.7 41849.7 49619.6 39038.8 39028.3 46939.5 TRUE FALSE 52240.97256 33358.79069 41243.78283 39098.04741 39137.17247 43442.31966 43104.48692 44141.3052 42422.91099 45407.86796 1.150482833 0.734647809 0.908295956 0.861041251 0.861902887 0.956713486 0.949273526 0.972106976 0.934263441 1 15.47065468 -6.784096337 20.36053771 0.959903673 0.891838878 0.077387364 0.098111395 68.03161059 61132.95372 0.032680121 0.028872775 1.64E-07 6.784096337 -0.068064795 YFDDEFTAQSITIT(ph)PPDRYDSLGLLELDQR ddPTM_A459_MK2206_30min_R1 1 YFDDEFTAQSITITPPDRYDSLGLLELDQR 30 1 P31751-2;P31751 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 YFDDEFTAQS(0.001)IT(0.399)IT(0.577)PPDRY(0.016)DS(0.007)LGLLELDQR 89.882 1.74E-06 31174000 1921.8 2113.6 1984 1837.5 2537.2 2210 2503.3 1926.9 1880.4 1618.6 TRUE FALSE 1758.340818 1976.004256 1849.331608 1979.024568 2436.137951 2335.12829 2336.309425 1910.053316 2075.874309 1819.124388 0.966586359 1.08623922 1.016605363 1.087899531 1.339181624 1.283655096 1.284304383 1.049984998 1.141139288 1 10.82902848 -6.013898117 21.6788664 1.19726467 1.033252915 0.32470952 0.103181136 130.3449306 203320.9626 0.031079765 0.041995384 9.69E-07 6.013898117 -0.164011756 YFDDEFTAQSITITPPDRY(ph)DSLGLLELDQR ddPTM_A459_MK2206_30min_R1 1 YFDDEFTAQSITITPPDRYDSLGLLELDQR 30 1 P31751-2;P31751 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 YFDDEFTAQSIT(0.028)IT(0.08)PPDRY(0.813)DS(0.08)LGLLELDQR 101.71 2.77E-07 47141000 1760.6 1565.9 1748.6 1203 1996.9 1531.7 1981.5 1518.1 1459.9 1241.3 TRUE FALSE 1610.851725 1463.959625 1629.909904 1295.655268 1917.359244 1618.42353 1849.31775 1504.827412 1611.661829 1395.081615 1.154664865 1.049372029 1.168325843 0.928730803 1.374370663 1.160092365 1.325598252 1.078666219 1.155245551 1 10.44613381 -4.36436766 20.4178678 1.145912574 16.30029767 0 0.129449263 17473.16854 2254763.997 0.030509104 22273.40454 4.32E-05 4.36436766 15.1543851 YFDEHYEYR ddPTM_A459_MK2206_30min_R2 2 YFDEHYEYR 9 0 P33552 P33552 CKS2 Cyclin-dependent kinases regulatory subunit 2 0 ; 103.88 0.02086 15741900 119289 119195 98827 99884 97211 109621 111151 86647 85469 103834 FALSE TRUE 128421.8576 113275.9496 102121.8429 91723.15769 93394.00769 113792.704 96556.74018 97972.0604 92902.93913 100445.9051 1.278517601 1.127730887 1.016684979 0.913159751 0.929794078 1.13287549 0.961281001 0.975371373 0.924905192 1 16.61605922 -4.960349214 1.886396606 0.97914378 1.314424468 0.721825698 0.059028881 0.304940064 1.518067314 0.017065334 0.160484555 1.10E-05 4.960349214 0.335280687 YFDGSGGNNHAVEHYR ddPTM_A459_MK2206_30min_R1 1 YFDGSGGNNHAVEHYR 16 0 P45974-2;P45974 P45974-2 USP5 Ubiquitin carboxyl-terminal hydrolase 5 0 122.33 0.00082036 7099500 2575.3 1960 2236.4 1861.1 2527.3 2163.8 2903.6 2094.2 1726.6 2108.2 FALSE TRUE 2356.257212 1832.403644 2084.599399 2004.442244 2426.632289 2286.312486 2709.906142 2075.89063 1906.086249 2369.379732 0.994461622 0.773368498 0.879808066 0.845977628 1.024163521 0.964941354 1.143719643 0.876132518 0.804466343 1 11.21029372 -6.250116379 24.39797149 0.971253183 0.866715994 0.184344806 0.097933846 911.3912057 1963796.846 0.029873648 0.038204956 5.62E-07 6.250116379 -0.104537189 YFDS(ph)GDYNMAK ddPTM_A459_MK2206_30min_R1 7 YFDSGDYNMAK 11 0 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;O43768-6;O43768-5;O43768-7;H3BQ52;H3BTD3;P56211-2;H3BMD8;P56211 A6NMQ3;H3BTD3;P56211 ENSA;ARPP19 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 1 YFDS(1)GDYNMAK;Y(0.048)FDS(0.952)GDYNMAK;YFDS(1)GDYNMAK;YFDS(0.997)GDY(0.002)NMAK;Y(0.118)FDS(0.882)GDYNMAK;YFDS(0.998)GDY(0.002)NMAK;YFDS(1)GDYNMAK 163.27 0.00056901 2035246100 33360.1 29092.1 29334.1 26490.3 30145.8 25131.8 31035.9 29138.3 26390.1 23158.5 TRUE FALSE 30522.64831 27198.199 27342.98302 28530.5875 28945.02895 26554.7408 28965.55174 28883.54692 29133.44533 26027.54982 1.172705404 1.04497731 1.050540032 1.096168779 1.112091962 1.020255114 1.112880465 1.109729772 1.119331076 1 14.66775189 -13.49756838 10.79559616 1.084294096 1.085074533 0 0.050325348 0 0 0 0.010918106 3.18E-14 13.49756838 0.000780436 YFDS(ph)GDYNMAK ddPTM_A459_MK2206_30min_R2 6 YFDSGDYNMAK 11 0 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;O43768-6;O43768-5;O43768-7;H3BQ52;H3BTD3;P56211-2;H3BMD8;P56211 A6NMQ3;H3BTD3;P56211 ENSA;ARPP19 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 1 YFDS(1)GDYNMAK;Y(0.099)FDS(0.901)GDYNMAK;YFDS(1)GDYNMAK;Y(0.002)FDS(0.998)GDYNMAK;Y(0.003)FDS(0.997)GDYNMAK;Y(0.062)FDS(0.938)GDYNMAK 154.23 0.00054657 632690000 628659.4 593849 563540.3 613819.5 633763 505227 640759 443990.1 409847.7 542005.9 TRUE FALSE 676790.047 564359.3222 582328.4523 563668.4833 608878.2802 524453.7675 556626.5736 502021.1305 445495.5121 524320.2919 1.290795068 1.076363686 1.110634971 1.075046097 1.16127163 1.000254569 1.061615547 0.957470345 0.849662924 1 19.00008886 -7.148922274 0.777524443 0.922577615 1.150646205 0.583451817 0.073155502 0.481253086 0.585994195 0.057147503 0.038447741 7.10E-08 7.148922274 0.22806859 YFEADPPGQVAAS(ph)PDPTT ddPTM_A459_MK2206_30min_R1 3 YFEADPPGQVAASPDPTT 18 0 O43598;H0Y8X4 O43598 DNPH1 2-deoxynucleoside 5-phosphate N-hydrolase 1 1 YFEADPPGQVAAS(0.992)PDPT(0.004)T(0.004);YFEADPPGQVAAS(1)PDPTT;YFEADPPGQVAAS(0.998)PDPT(0.001)T 161.2 1.09E-05 15589700 8255.9 8799.8 8745.7 6957.7 8585.6 7685.4 8501.9 7489.2 7260.9 6142.9 TRUE FALSE 7553.692352 8226.931421 8152.066251 7493.58326 8243.617372 8120.540706 7934.753764 7423.722714 8015.696538 6903.928829 1.094115038 1.191630393 1.180786542 1.085408533 1.19404727 1.176220223 1.149309902 1.075289578 1.161034063 1 12.75320188 -9.869773111 0.47872758 0.975437674 1.154996228 0.512015339 0.042557746 5.704504791 1.285609736 0.28633041 0.021959362 1.35E-10 9.869773111 0.179558554 YFEADPPGQVAAS(ph)PDPTT ddPTM_A459_MK2206_30min_R2 4 YFEADPPGQVAASPDPTT 18 0 O43598;H0Y8X4 O43598 DNPH1 2-deoxynucleoside 5-phosphate N-hydrolase 1 1 YFEADPPGQVAAS(0.972)PDPT(0.014)T(0.014);YFEADPPGQVAAS(0.984)PDPT(0.004)T(0.012);YFEADPPGQVAAS(0.972)PDPT(0.014)T(0.014);YFEADPPGQVAAS(0.999)PDPTT 163.44 5.00E-06 17297300 154869 192792 173577 205637 177177 204675 184522 151788 163279 182587 TRUE FALSE 166725.8897 183218.2296 179363.9705 188835.7993 170220.1407 212464.0505 160294.0397 171627.2128 177480.7123 176629.2011 0.94393163 1.037304299 1.01548311 1.069108608 0.963714605 1.202881795 0.90751721 0.971680853 1.004820897 1 17.43036435 YFEGEFTGLPPALT(ph)PPAPHSLLTAR ddPTM_A459_MK2206_30min_R2 2 YFEGEFTGLPPALTPPAPHSLLTAR 25 0 Q6P5Z2 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 1 YFEGEFTGLPPALT(0.995)PPAPHS(0.003)LLT(0.002)AR;YFEGEFTGLPPALT(0.996)PPAPHS(0.002)LLT(0.002)AR 74.581 0.00044044 9846100 14252.2 22356.7 17709.5 25834 22915.9 26361.8 24103.3 20301 21080.5 26039.4 TRUE FALSE 15343.35939 21246.49879 18299.92589 23723.27956 22016.10662 27365.01677 20938.50776 22954.4104 22914.04379 25189.73651 0.609111548 0.843458556 0.726483418 0.941783553 0.874010993 1.086355816 0.83123171 0.911260441 0.909657938 1 14.62054841 -3.971881504 0.602472314 0.939301934 2.34E-17 0.585874424 0.08213719 6.34138454 0.846088632 0.037855783 5.143085704 0.000106689 3.971881504 -0.939301934 YFPSS(ph)LSPVTPSESLPRPR ddPTM_A459_MK2206_30min_R1 1 YFPSSLSPVTPSESLPRPR 19 1 K7EKZ6;K7EQ21;Q9P0U4;Q9P0U4-2 K7EKZ6 CXXC1 CXXC-type zinc finger protein 1 1 YFPS(0.046)S(0.549)LS(0.405)PVTPSESLPRPR 123.61 0.00022636 32868000 3017.4 2896.1 2876.1 2784.3 3252.6 2687.2 3080.4 3121.5 2401.1 2185.6 TRUE FALSE 2760.754285 2707.563364 2680.878345 2998.747268 3123.042055 2839.346942 2874.912137 3094.209055 2650.702937 2456.368628 1.123916929 1.102262638 1.091399033 1.220805067 1.271406099 1.155912394 1.170391163 1.25966804 1.079114473 1 11.26231137 -5.748684749 24.99838048 1.180386227 1.105499824 0.088356426 0.077618583 412.348326 808173.3991 0.020085506 0.034498491 1.78E-06 5.748684749 -0.074886403 YFPSSCLDLNSPT(ph)SPTPTR ddPTM_A459_MK2206_30min_R1 3 YFPSSCLDLNSPTSPTPTR 19 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 YFPSSCLDLNS(0.002)PT(0.469)S(0.469)PT(0.058)PT(0.002)R;YFPSSCLDLNS(0.004)PT(0.767)S(0.212)PT(0.016)PTR;YFPSSCLDLNS(0.251)PT(0.38)S(0.311)PT(0.05)PT(0.007)R 175.16 4.15E-10 28668100 3899.47 3088.34 2943.64 2522.75 4319.5 3865.42 4145.2 3265.89 2825 2570.88 TRUE FALSE 3567.7996 2887.288505 2743.833918 2717.052642 4147.445168 4084.27674 3868.681271 3237.336668 3118.668859 2889.380024 1.234797628 0.999276136 0.94962722 0.940358354 1.435410065 1.413547788 1.338931272 1.120426057 1.079355721 1 11.49654425 -6.244930979 24.94267067 1.251795901 1.02293438 0.284117886 0.153461318 1000.230538 1511255.819 0.047991347 0.061783008 5.69E-07 6.244930979 -0.228861521 YFPSSCLDLNSPT(ph)SPTPTR ddPTM_A459_MK2206_30min_R2 2 YFPSSCLDLNSPTSPTPTR 19 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 YFPSSCLDLNS(0.036)PT(0.472)S(0.472)PT(0.017)PT(0.002)R;YFPSSCLDLNS(0.003)PT(0.79)S(0.193)PT(0.012)PT(0.003)R 175.8 2.16E-12 26837000 20952.7 24682 26138 30330 29116 28717 29156 18270.2 23736 24064 TRUE FALSE 22556.85482 23456.32777 27009.42787 27851.94198 27972.75954 29809.84556 25327.78218 20658.17787 25800.51438 23278.79365 0.968987275 1.007626431 1.160258915 1.196451259 1.201641286 1.280558005 1.088019532 0.88742476 1.10832695 1 14.50672868 -7.532573556 24.69865132 0.996269889 1.140880208 0.27630025 0.099190313 248.4625498 632976.2939 0.050246907 0.02905676 2.93E-08 7.532573556 0.14461032 YFPSSCLDLNSPTS(ph)PTPTR ddPTM_A459_MK2206_30min_R1 1 YFPSSCLDLNSPTSPTPTR 19 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 YFPSSCLDLNS(0.012)PT(0.375)S(0.607)PT(0.006)PTR 189.84 2.78E-15 6827600 935.37 939.81 948.72 811.87 1043.6 1084 1274.6 846.86 530.98 769.06 TRUE FALSE 855.8118697 878.6281982 884.3235297 874.4003681 1002.031202 1145.375143 1189.57376 839.4559923 586.1772711 864.3369589 0.990136845 1.016534338 1.023123587 1.011642924 1.159306208 1.325148869 1.376284732 0.971213812 0.678181426 1 9.755450042 -7.997623604 24.99964793 0.834292971 1.128206692 0.398081886 0.144668351 72.12653421 758772.4592 0.08740987 0.04157805 1.01E-08 7.997623604 0.293913722 YFPSSLS(ph)PVTPSESLPR ddPTM_A459_MK2206_30min_R2 2 YFPSSLSPVTPSESLPR 17 0 K7EKZ6;K7EQ21;Q9P0U4;Q9P0U4-2 K7EKZ6 CXXC1 CXXC-type zinc finger protein 1 1 YFPS(0.004)S(0.042)LS(0.92)PVT(0.029)PS(0.005)ES(0.001)LPR;YFPS(0.003)S(0.012)LS(0.98)PVT(0.005)PSESLPR 122.96 0.0013685 6385400 26753 23302.4 23312.2 23667.5 21080.5 19043.2 23976.4 24572.3 17994.5 26589.5 TRUE FALSE 28801.23025 22145.2367 24089.41711 21733.78954 20252.77365 19767.90232 20828.26988 27783.98398 19559.62908 25721.88679 1.119716858 0.860949155 0.936533828 0.844953161 0.787375118 0.768524583 0.809748913 1.080168971 0.760427462 1 14.65070885 -4.760476961 24.98243815 0.867917115 1.119717156 0.357105435 0.09954112 26.3455044 683519.4446 0.024515649 0.145088004 1.74E-05 4.760476961 0.251800042 YFPSSLS(ph)PVTPSESLPRPR ddPTM_A459_MK2206_30min_R1 1 YFPSSLSPVTPSESLPRPR 19 1 K7EKZ6;K7EQ21;Q9P0U4;Q9P0U4-2 K7EKZ6 CXXC1 CXXC-type zinc finger protein 1 1 YFPS(0.015)S(0.092)LS(0.892)PVTPSESLPRPR 150.13 1.55E-05 32781000 2340.1 2092.1 2301.7 2030.4 2367.8 1995.8 2202.8 1993.9 1559.9 1615.8 TRUE FALSE 2141.062207 1955.90391 2145.467017 2186.78176 2273.485512 2108.800471 2055.855231 1976.467543 1722.057187 1815.977503 1.179013619 1.077052941 1.181439205 1.204189896 1.251934844 1.161248126 1.132092897 1.088376667 0.948281124 1 10.82653061 -7.959462275 1.918884524 0.973501146 1.17419124 0.753437402 0.044489334 0.184575425 1.250773482 0.039958692 0.013742523 1.10E-08 7.959462275 0.200690094 YFPSSLS(ph)PVTPSESLPRPR ddPTM_A459_MK2206_30min_R2 2 YFPSSLSPVTPSESLPRPR 19 1 K7EKZ6;K7EQ21;Q9P0U4;Q9P0U4-2 K7EKZ6 CXXC1 CXXC-type zinc finger protein 1 1 YFPSSLS(0.592)PVT(0.247)PS(0.161)ESLPRPR;YFPS(0.001)S(0.004)LS(0.941)PVT(0.043)PS(0.011)ESLPRPR 181.81 1.68E-12 9189600 24338 29624 26910 31106 27677 30523 32246 23446 25197 31988 TRUE FALSE 26201.33599 28152.91524 27807.16597 28564.5403 26590.26191 31684.57415 28012.06147 26510.4727 27388.58951 30944.23418 0.846727563 0.909795184 0.898621882 0.923097341 0.85929617 1.023924973 0.905243326 0.856717686 0.885095083 1 14.917383 -3.617270866 1.208063799 0.91631686 4.32E-08 0.145232965 0.051830827 46.77010975 6.13623988 0.01532439 100.1394584 0.000241395 3.617270866 -0.916316817 YFQINQDEEEEEDED ddPTM_A459_MK2206_30min_R1 6 YFQINQDEEEEEDED 15 0 K7ERI7;P35268 K7ERI7 RPL22 60S ribosomal protein L22 0 ;;;;; 227.94 1.36E-12 295068000 28033 29109.4 27013.34 25634.55 29665.42 28328.7 27145.76 25514.98 21021.84 18862.55 FALSE TRUE 25648.64614 27214.37277 25179.74974 27608.92748 28483.7835 29932.64651 25334.91588 25291.90522 23207.1355 21199.3851 1.209876891 1.283734063 1.187758495 1.302345674 1.343613665 1.411958242 1.195077865 1.193049001 1.094707954 1 14.3717348 -8.207005506 1.354263874 1.007511406 1.284861289 0.686287823 0.063740717 0.253503852 0.881027049 0.064213941 0.020364945 6.21E-09 8.207005506 0.277349883 YFQINQDEEEEEDED ddPTM_A459_MK2206_30min_R2 3 YFQINQDEEEEEDED 15 0 K7ERI7;P35268 K7ERI7 RPL22 60S ribosomal protein L22 0 ;; 157.68 0.0021151 48588000 100319 122105 107940 132954 122139 116489 133932 109453 108835 108590 FALSE TRUE 107999.4998 116041.4433 111538.6657 122091.2329 117343.2092 120922.0705 116346.5675 123758.8829 118301.2716 105046.7172 1.028109232 1.104665109 1.061800585 1.162256529 1.117057365 1.151126601 1.107569762 1.178131847 1.126177712 1 16.68067155 -5.74453738 24.97492937 1.128368544 1.068838963 0.197821471 0.04917163 334.4975645 494260.412 0.01229204 0.021215866 1.80E-06 5.74453738 -0.059529581 YFQISQDEDES(ph)ESED ddPTM_A459_MK2206_30min_R1 3 YFQISQDEDESESED 15 0 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 RPL22L1 60S ribosomal protein L22-like 1 1 YFQISQDEDES(0.607)ES(0.393)ED;YFQISQDEDES(0.953)ES(0.047)ED;YFQISQDEDES(0.959)ES(0.041)ED 181.98 2.06E-05 17301800 12110.7 11878.7 11142.3 10240.4 12943.9 11307.4 12158.3 10702.5 9898.1 8912.7 TRUE FALSE 11080.62137 11105.39447 10385.99172 11029.11738 12428.31705 11947.61522 11347.24199 10608.92917 10927.04292 10016.87256 1.106195701 1.108668839 1.036849741 1.101053978 1.240738262 1.192749048 1.132812853 1.059105934 1.090863725 1 13.29014452 -10.85007757 5.60984193 0.999979827 1.11997332 0.282728177 0.056729731 1.61E-05 1.93E-06 0.061864494 0.015001822 1.41E-11 10.85007757 0.119993494 YFQISQDEDES(ph)ESED ddPTM_A459_MK2206_30min_R2 3 YFQISQDEDESESED 15 0 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 RPL22L1 60S ribosomal protein L22-like 1 1 YFQISQDEDES(0.502)ES(0.498)ED;YFQISQDEDES(0.5)ES(0.5)ED;YFQISQDEDES(0.748)ES(0.252)ED 88.092 0.033734 2279900 39278 41191 38930.7 41509 41234 42349 41271 39912 41727 44117.9 TRUE FALSE 42285.15388 39145.51484 40228.63011 38117.58192 39614.94598 43960.62087 35852.06812 45128.63544 45356.33903 42678.33654 0.990787301 0.917222132 0.942600705 0.893136542 0.928221416 1.030045321 0.840053082 1.057413177 1.062748521 1 15.38121633 -7.796665578 24.99999991 1.045060808 0.936054781 0.473817319 0.050836 150.4302768 106758.2707 0.026393213 0.012679673 1.60E-08 7.796665578 -0.109006027 YFQISQDEDESES(ph)ED ddPTM_A459_MK2206_30min_R1 3 YFQISQDEDESESED 15 0 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 RPL22L1 60S ribosomal protein L22-like 1 1 YFQISQDEDES(0.14)ES(0.86)ED;YFQISQDEDESES(1)ED;YFQISQDEDES(0.002)ES(0.998)ED 198.74 2.42E-05 16407500 8443.85 8331.44 7881.26 7530.41 9214.3 9047.5 8337.3 7918.73 8028.2 6639.25 TRUE FALSE 7725.656217 7789.061742 7346.30203 8110.403483 8847.274919 9559.761631 7781.133929 7849.497378 8862.760119 7461.770414 1.035365039 1.043862423 0.984525337 1.086927503 1.185680399 1.28116534 1.042799965 1.051961792 1.18775567 1 12.86530226 -5.973642603 6.27710037 1.131755314 1.024617949 0.254078222 0.078815454 0.238261574 30.96858357 0.023266146 0.034135229 1.06E-06 5.973642603 -0.107137365 YFQISQDEDESES(ph)ED ddPTM_A459_MK2206_30min_R2 3 YFQISQDEDESESED 15 0 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 RPL22L1 60S ribosomal protein L22-like 1 1 YFQISQDEDES(0.055)ES(0.945)ED;YFQISQDEDESES(1)ED;YFQISQDEDES(0.036)ES(0.964)ED 114.89 0.0031159 2519000 35089.3 36365.2 36181.7 38773.2 37894.9 36619.1 43253 33784.4 34581.5 40260 TRUE FALSE 37775.76379 34559.35705 37387.97982 35605.30553 36406.95582 38012.66551 37573.82914 38200.13708 37589.33636 38946.3195 0.969944382 0.887358741 0.959987498 0.914214899 0.934798366 0.976027157 0.964759434 0.980840746 0.965157603 1 15.24919938 -6.742589316 5.669580931 0.975531997 0.930835026 0.471730835 0.023244007 0.14598362 14.3523065 0.007327851 0.007033948 1.81E-07 6.742589316 -0.044696971 YFQS(ph)PSR ddPTM_A459_MK2206_30min_R1 1 YFQSPSR 7 0 Q16629;Q16629-4;H7BZZ6 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 1 YFQS(0.944)PS(0.056)R 167.12 7.24E-05 6164000 7287.3 7001.3 6540.9 5140.7 5949.1 5469.2 6791.6 5144.9 6208.1 6664.8 TRUE FALSE 6667.476868 6545.514097 6096.921932 5536.637605 5712.13475 5778.861378 6338.544756 5099.918682 6853.454211 7490.485741 0.890126101 0.873843743 0.813955482 0.739156017 0.762585358 0.771493542 0.846212779 0.680852866 0.914954577 1 12.87084356 -8.515494451 18.70589439 1.000000005 0.798053907 0.554017632 0.05996836 11.33973801 28723.79243 0.059801435 0.015440664 3.05E-09 8.515494451 -0.201946097 YFQS(ph)PSR ddPTM_A459_MK2206_30min_R2 1 YFQSPSR 7 0 Q16629;Q16629-4;H7BZZ6 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 1 YFQS(0.998)PS(0.002)R 83.647 0.038904 19860000 48798 45702 40414 53705 38769 42966 44621 39201 32343 44754 TRUE FALSE 52534.0124 43432.50514 41761.38259 49317.12971 37246.73426 44601.10124 38762.2091 44324.7053 35156.13568 43293.68065 1.21343373 1.003206576 0.964606889 1.139129983 0.860327274 1.030198878 0.895331802 1.023814668 0.812038504 1 15.40186884 -1.522878745 0.694511224 0.952875599 29.46585304 0.408213925 0.088754363 279.1108911 1.514680492 0.033263581 12345.9858 0.03 1.522878745 28.51297744 YGASSLNGCSPS(ph)PVHTMEQKPLQSLSSK ddPTM_A459_MK2206_30min_R2 2 YGASSLNGCSPSPVHTMEQKPLQSLSSK 28 1 Q9ULJ7-2;Q9ULJ7 Q9ULJ7-2 ANKRD50 Ankyrin repeat domain-containing protein 50 1 Y(0.011)GAS(0.012)S(0.027)LNGCS(0.279)PS(0.635)PVHT(0.032)MEQKPLQS(0.002)LS(0.001)S(0.001)K;Y(0.001)GAS(0.001)S(0.003)LNGCS(0.136)PS(0.847)PVHT(0.011)MEQKPLQSLSSK 58.319 0.0024951 11023100 23558.7 34346 31416 37066 30139 31321 32622 27747.1 28349 25822 TRUE FALSE 25362.37219 32640.42758 32463.39376 34037.58923 28955.59142 32512.9426 28338.69221 31373.74124 30814.74478 24979.43025 1.015330291 1.306692236 1.299605052 1.362624723 1.159177416 1.301588638 1.134481128 1.25598306 1.233604789 1 14.60845295 -8.636770897 17.07614599 1 1.236256381 0.332661955 0.097318227 11375.62029 1705580.348 0.091250313 0.02356073 2.31E-09 8.636770897 0.236256381 YGDGGSTFQSTTGHCVHMR ddPTM_A459_MK2206_30min_R1 5 YGDGGSTFQSTTGHCVHMR 19 0 P31943;G8JLB6;E9PCY7;H0YB39;H0YBD7;D6RIT2;H0YBG7 P31943 HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed" 0 ;;;; 79.92 0.0035819 43424200 13776.4 7467.23 10198.4 7553.19 18868.9 16934.3 15699.3 13697.4 6572.83 5937.47 FALSE TRUE 12604.64484 6981.11197 9506.161022 8134.938003 18117.31176 17893.10543 14652.02834 13577.64508 7256.0992 6673.048609 1.888888509 1.04616531 1.424560434 1.219073692 2.71499772 2.681398935 2.195702324 2.034698962 1.087373946 1 12.7041303 -6.227752739 24.9862699 2.052715997 1.371913442 0.171924345 0.573954048 947.4248108 702729.8837 0.171878194 0.221881742 5.92E-07 6.227752739 -0.680802555 YGEHEAS(ph)PDNGQNEFSDIIK ddPTM_A459_MK2206_30min_R1 1 YGEHEASPDNGQNEFSDIIK 20 0 P46939;Q5SYY2 P46939 UTRN Utrophin 1 YGEHEAS(1)PDNGQNEFSDIIK 77.689 0.003431 6086000 2266.3 2495.1 2594.2 1991.3 2091 1817.2 2262.4 2282.7 2202.3 2328.4 TRUE FALSE 2073.539284 2332.668536 2418.112932 2144.670271 2007.711042 1920.088294 2111.479424 2262.742595 2431.236966 2616.859771 0.79237692 0.8913999 0.924051399 0.81955873 0.767221486 0.733737556 0.806875266 0.864678582 0.929066583 1 11.3536209 -8.357560357 1.910026023 0.996584341 0.821461848 0.55817741 0.052572777 0.278613238 2.023075264 0.057411984 0.016518206 4.39E-09 8.357560357 -0.175122493 YGGDEIPFS(ph)PYR ddPTM_A459_MK2206_30min_R1 2 YGGDEIPFSPYR 12 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 YGGDEIPFS(1)PYR;YGGDEIPFS(1)PYR 171.99 0.000243 69244000 10762.2 10375.9 10394.9 9852.9 11008.7 9524.2 10597.4 10219.7 8904 8999.4 TRUE FALSE 9846.818375 9700.427024 9689.32315 10611.77207 10570.20017 10063.45197 9890.466782 10130.35024 9829.602663 10114.31361 0.973552804 0.959079122 0.957981285 1.04918361 1.045073405 0.994971321 0.977868312 1.001585538 0.97185069 1 13.3041108 -5.711603818 24.99958477 1.00587919 0.963091752 0.397666827 0.023827819 122.9256976 61663.50723 0.007161866 0.012404691 1.94E-06 5.711603818 -0.042787438 YGGDEIPFS(ph)PYR ddPTM_A459_MK2206_30min_R2 1 YGGDEIPFSPYR 12 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 1 YGGDEIPFS(1)PYR 166.62 0.00046273 14830000 38665 41342 47293 53927 50126 45870 52566 48847 43526 44738 TRUE FALSE 41625.22213 39289.0164 48869.72502 49520.9916 48157.80138 47615.61499 45664.02106 55231.47062 47311.8128 43278.20272 0.961805701 0.907824584 1.129199503 1.144247877 1.112749568 1.100221636 1.055127482 1.276196033 1.093201885 1 15.40135297 -5.265180002 24.85699723 1.122191953 0.934815134 0.521538042 0.068228003 193.1206274 1283325.237 0.01721309 0.038153924 5.43E-06 5.265180002 -0.187376819 YGGELVPHFPAR ddPTM_A459_MK2206_30min_R2 1 YGGELVPHFPAR 12 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-8 FLNB Filamin-B 0 108.37 0.011363 6608600 51616 52978 51931 55546 57903 57257 61408 46618 54694 51849 FALSE TRUE 55567.76065 50347.18956 53662.35362 51007.71412 55629.43728 59435.95526 53345.05584 52711.13266 59451.18526 50157.17138 1.107872695 1.003788455 1.06988397 1.01695755 1.109102363 1.184994162 1.0635579 1.050919165 1.185297807 1 15.61416837 -6.27972847 23.52654682 1.104054279 1.047798602 0.138043311 0.059542065 680.2619868 875065.9825 0.017868699 0.020309813 5.25E-07 6.27972847 -0.056255677 YGGPNHIVGS(ph)PFK ddPTM_A459_MK2206_30min_R1 1 YGGPNHIVGSPFK 13 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 YGGPNHIVGS(1)PFK 87.647 0.01644 12684000 7485.4 8369.6 8484.1 7416.2 6734.2 5860.1 6855 6731.6 6948.5 6670.3 TRUE FALSE 6848.727423 7824.737519 7908.22293 7987.397009 6465.962554 6191.893798 6397.715458 6672.746331 7670.82144 7496.667122 0.913569632 1.043762167 1.054898504 1.065459741 0.862511627 0.82595288 0.853407968 0.890095055 1.023230899 1 12.87203363 -6.263506179 24.93716732 0.896752558 1.023695059 0.360186016 0.070719986 180.0236496 2172087.604 0.022150436 0.026403943 5.45E-07 6.263506179 0.126942501 YGGPNHIVGS(ph)PFK ddPTM_A459_MK2206_30min_R2 2 YGGPNHIVGSPFK 13 0 O75369-8;O75369-2;O75369-9;O75369;O75369-6;O75369-3;E7EN95;O75369-7;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 YGGPNHIVGS(1)PFK;YGGPNHIVGS(1)PFK 113.65 0.0044948 23679100 254254 261686 245431 254295 300484 206122 316724 233935 245169 294034 TRUE FALSE 273719.8817 248691.0538 253613.547 233518.2851 288685.4883 213966.1171 275137.7583 264511.1077 266493.3565 284439.6947 0.962312528 0.874319086 0.891625015 0.82097643 1.014926868 0.752237192 0.967297334 0.929937392 0.936906351 1 18.11776329 -8.332918436 0.924572399 0.99566359 0.890951983 0.171340724 0.070758657 0.925329047 1.706231474 0.063401647 0.022448106 4.65E-09 8.332918436 -0.104711607 YGGPYHIGGSPFK ddPTM_A459_MK2206_30min_R2 1 YGGPYHIGGSPFK 13 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 101.89 0.013698 4461400 47362 69555 61324 71273 71485 72742 65155 56117 68285 60487 FALSE TRUE 50988.07114 66100.99984 63368.51155 65449.76791 68678.13972 75510.24778 56600.07023 63451.68458 74224.30587 58513.31414 0.871392637 1.129674516 1.082975943 1.118544879 1.173718165 1.290479763 0.967302418 1.08439738 1.268502852 1 15.83647731 -4.76107667 24.99999998 1.127006463 0.871392351 0.377833342 0.097157446 9.246982719 636500.7896 0.023865031 0.135565168 1.73E-05 4.76107667 -0.255614112 YGGSVGSQPPPVAPEPGPVPS(ph)SPSQEPPTKR ddPTM_A459_MK2206_30min_R1 2 YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR 31 1 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 YGGSVGSQPPPVAPEPGPVPS(0.485)S(0.485)PS(0.03)QEPPTKR;YGGSVGSQPPPVAPEPGPVPS(0.482)S(0.482)PS(0.031)QEPPT(0.005)KR 168.91 3.86E-28 65635000 6603.2 7390.8 6806.1 6234 6356 5622.4 6446.5 6655.3 5311.4 5112.9 TRUE FALSE 6041.563165 6909.657577 6344.120895 6714.14376 6102.827061 5940.735429 6016.465747 6597.113414 5863.539037 5746.324652 1.051378669 1.202448172 1.10403106 1.168424022 1.062040074 1.033832195 1.047011109 1.1480579 1.020398149 1 12.48842379 -6.291381671 15.63349059 1.058143874 1.134665051 0.354661554 0.052181838 8.431989664 4401.671489 0.015494875 0.017598992 5.11E-07 6.291381671 0.076521176 YGGSVGSQPPPVAPEPGPVPSS(ph)PSQEPPTKR ddPTM_A459_MK2206_30min_R1 1 YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR 31 1 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 YGGSVGSQPPPVAPEPGPVPS(0.383)S(0.603)PS(0.014)QEPPTKR 131.56 2.10E-18 7087000 1068.6 956.75 880.02 740.1 936.47 827.68 1069.7 1001.3 736.35 776.15 TRUE FALSE 977.7099586 894.4654011 820.2866943 797.1026302 899.1684169 874.5425263 998.3422648 992.5457397 812.8962176 872.3053216 1.120834568 1.02540404 0.940366491 0.913788567 1.030795519 1.002564704 1.144487188 1.137842124 0.93189414 1 9.768689381 -7.05815127 24.99210007 1.066254658 1.000324164 0.07176889 0.078007125 574.4907599 246900.8853 0.030768369 0.023833101 8.75E-08 7.05815127 -0.065930494 YGGSVGSQPPPVAPEPGPVPSS(ph)PSQEPPTKR ddPTM_A459_MK2206_30min_R2 4 YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR 31 1 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 YGGSVGSQPPPVAPEPGPVPS(0.374)S(0.567)PS(0.057)QEPPT(0.003)KR;YGGSVGSQPPPVAPEPGPVPS(0.365)S(0.58)PS(0.041)QEPPT(0.014)KR;YGGSVGSQPPPVAPEPGPVPS(0.364)S(0.585)PS(0.05)QEPPT(0.001)KR;YGGSVGSQPPPVAPEPGPVPS(0.387)S(0.555)PS(0.055)QEPPT(0.003)KR 124.39 2.08E-17 209209000 346056 404377 396860 434787 423452 386373 452379 350357 349444 368627 TRUE FALSE 372550.3134 384296.2262 410091.1143 399263.5113 406825.1468 401076.6953 392981.0939 396149.8629 379838.0075 356598.7312 1.044732583 1.077671322 1.150007217 1.119643668 1.140848554 1.12472833 1.102026058 1.110912149 1.065169262 1 18.44394204 -8.590619486 1.994463346 1.000065581 1.111423482 0.577256977 0.028816678 0.304362119 2.717267786 0.029530763 0.008233127 2.57E-09 8.590619486 0.111357901 YGLQDS(ph)DEEEEEHPSK ddPTM_A459_MK2206_30min_R1 2 YGLQDSDEEEEEHPSK 16 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 YGLQDS(0.983)DEEEEEHPS(0.016)K;YGLQDS(1)DEEEEEHPSK 106.73 0.0022765 25968200 10427.2 8047.6 9041.9 6267.9 10164.4 9297.3 11146.2 8343.7 7646.8 8124 TRUE FALSE 9540.311885 7523.699777 8428.16102 6750.654744 9759.530425 9823.705091 10402.65734 8270.751911 8441.712224 9130.462453 1.044888135 0.824021764 0.923081505 0.739355184 1.068897712 1.075926345 1.139335208 0.905841512 0.92456568 1 13.15647222 -6.290441538 24.87824303 1.023240128 0.881510165 0.320281642 0.097124261 814.1250796 698359.5335 0.030979201 0.035133073 5.12E-07 6.290441538 -0.141729963 YGLQDS(ph)DEEEEEHPSK ddPTM_A459_MK2206_30min_R2 3 YGLQDSDEEEEEHPSK 16 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 YGLQDS(0.998)DEEEEEHPS(0.002)K;YGLQDS(1)DEEEEEHPSK;YGLQDS(1)DEEEEEHPSK 194.67 1.22E-06 184391000 509128 621597 554208 700280 703540 672555 756430 602476 632534 651533 TRUE FALSE 548107.2311 590729.3969 572685.0181 643064.8839 675915.4846 698149.5518 657109.8324 681221.6818 687550.664 630273.5316 0.869633903 0.937258773 0.908629332 1.020294922 1.072416103 1.107692957 1.042578816 1.080834983 1.090876627 1 19.26561855 -5.872439795 2.618557383 1.07043487 0.904482099 0.835208183 0.031820621 0.097746311 1.358150058 0.009125939 0.015118183 1.34E-06 5.872439795 -0.165952771 YGLQDSDEEEEEHPS(ph)K ddPTM_A459_MK2206_30min_R1 1 YGLQDSDEEEEEHPSK 16 0 P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3 P52948-6 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 YGLQDS(0.028)DEEEEEHPS(0.972)K 126.09 0.00076124 14766000 11034 6990.2 9408.4 6711.5 10464 9452.9 11028 9576.9 7683.8 7924.3 TRUE FALSE 10095.50036 6535.136709 8769.784021 7228.420893 10047.19672 9988.115029 10292.34224 9493.170173 8482.558507 8906.022109 1.13355887 0.733788512 0.9847027 0.811632938 1.128135165 1.121501261 1.15566098 1.065927084 0.952451993 1 13.12056548 -6.271519093 24.98213447 1.080705942 0.907824303 0.304600117 0.113631254 754.9791572 1871179.851 0.033612201 0.038540411 5.35E-07 6.271519093 -0.172881639 YGMGTS(ph)VER ddPTM_A459_MK2206_30min_R1 2 YGMGTSVER 9 0 P08559-3;P08559;P08559-2;P08559-4 P08559-3 PDHA1 "Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial" 1 YGMGT(0.028)S(0.972)VER;YGMGT(0.028)S(0.972)VER 104.42 0.01436 104832000 14433.5 16140.2 15263.9 16412.9 19289.9 17893.9 20231.1 16855.7 15793.4 14739 TRUE FALSE 13205.85503 15089.47005 14227.829 17677.0244 18521.54244 18907.03715 18881.52023 16708.33239 17435.18045 16564.97859 0.797215339 0.910926021 0.858910195 1.067132342 1.118114481 1.141386151 1.139845737 1.008654029 1.052532628 1 14.01584872 -5.776408386 5.689725696 1.084015956 0.859819755 0.783266233 0.052856312 0.073866234 7.602377415 0.015430701 0.02450211 1.67E-06 5.776408386 -0.2241962 YGMGTS(ph)VER ddPTM_A459_MK2206_30min_R2 2 YGMGTSVER 9 0 P08559-3;P08559;P08559-2;P08559-4 P08559-3 PDHA1 "Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial" 1 YGMGT(0.035)S(0.965)VER;YGMGT(0.024)S(0.976)VER 84.817 0.035994 84780000 440310 703500 656490 861910 668960 880210 608110 480850 996220 493840 TRUE FALSE 474020.4721 668565.213 678377.0489 791489.1959 642693.2691 913707.0083 528264.4265 543698.746 1082869.415 477726.0412 0.992243318 1.399474082 1.420012707 1.6567847 1.345317637 1.912617127 1.105789471 1.138097359 2.266716321 1 18.865824 -4.615895926 1.96624649 1.48955402 0.662565329 0.136060365 0.367010874 2.705936614 7.704115187 0.093726853 4.727480363 2.42E-05 4.615895926 -0.826988691 YGPADVEDT(ph)TGSGATDSKDDDDIDLFGSDDEEESEEAKR ddPTM_A459_MK2206_30min_R1 2 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR 39 2 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 1 Y(0.002)GPADVEDT(0.286)T(0.286)GS(0.069)GAT(0.064)DS(0.224)KDDDDIDLFGS(0.069)DDEEESEEAKR;Y(0.001)GPADVEDT(0.285)T(0.285)GS(0.249)GAT(0.06)DS(0.06)KDDDDIDLFGS(0.06)DDEEESEEAKR 50.88 0.0048642 7498400 403.48 610.67 639.16 586.74 506.93 429.252 501.37 363.76 667.15 417.35 TRUE FALSE 369.1619072 570.915272 595.7756 631.9308165 486.7379047 453.5558773 467.9245221 360.5796847 736.5026299 469.0544688 0.787034197 1.217161993 1.270162933 1.347243995 1.037700176 0.9669578 0.997591012 0.76873734 1.570185722 1 8.873611655 -6.424019246 24.96503422 1.037795279 1.171068392 0.035057128 0.235448365 130.6364377 32970.60034 0.071999219 0.081639415 3.77E-07 6.424019246 0.133273113 YGPADVEDTTGSGATDS(ph)KDDDDIDLFGSDDEEESEEAKR ddPTM_A459_MK2206_30min_R1 1 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR 39 2 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 1 YGPADVEDT(0.134)T(0.134)GS(0.117)GAT(0.035)DS(0.31)KDDDDIDLFGS(0.27)DDEEESEEAKR 70.823 2.12E-06 389110000 5630.7 7697 8118.7 6991.9 4423.4 3750.5 4792 5632.8 6752.1 6012.1 TRUE FALSE 5151.779397 7195.923901 7567.625264 7530.417349 4247.206611 3962.850069 4472.334423 5583.553023 7454.004958 6756.924337 0.762444441 1.064970324 1.119980761 1.114474127 0.628570989 0.586487264 0.661889079 0.826345353 1.103165373 1 12.72215098 -6.253164329 24.67938774 0.774704792 1.026468578 0.249096273 0.178465688 685.9395197 2045734.226 0.055940349 0.070957086 5.58E-07 6.253164329 0.251763786 YGPADVEDTTGSGATDS(ph)KDDDDIDLFGSDDEEESEEAKR ddPTM_A459_MK2206_30min_R2 1 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR 39 2 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 1 Y(0.002)GPADVEDT(0.166)T(0.166)GS(0.138)GAT(0.138)DS(0.383)KDDDDIDLFGS(0.006)DDEEESEEAKR 46.68 0.0034072 30938000 22545 22953 22246 23526 18590 12223 27374 19861 14264 27914 TRUE FALSE 24271.06253 21813.1874 22987.67054 21603.85054 17860.06319 12688.15483 23779.76092 22456.90089 15504.65694 27003.16847 0.898822765 0.807801034 0.851295305 0.800048727 0.661406206 0.46987652 0.880628544 0.831639477 0.574179173 1 14.72084108 -6.036792897 5.06846966 0.721859938 0.845644081 0.111803674 0.144200868 0.416550485 26.97795215 0.042692709 0.058008418 9.19E-07 6.036792897 0.123784144 YGPADVEDTTGSGATDSKDDDDIDLFGS(ph)DDEEESEEAKR ddPTM_A459_MK2206_30min_R1 3 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR 39 2 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 1 YGPADVEDT(0.004)T(0.004)GS(0.004)GAT(0.001)DS(0.003)KDDDDIDLFGS(0.983)DDEEESEEAKR;Y(0.001)GPADVEDT(0.035)T(0.035)GS(0.029)GAT(0.08)DS(0.206)KDDDDIDLFGS(0.613)DDEEESEEAKR;YGPADVEDT(0.001)T(0.001)GS(0.001)GAT(0.001)DS(0.053)KDDDDIDLFGS(0.942)DDEEES(0.001)EEAKR 76.979 2.63E-07 283598100 9912.13 12852.3 12045.75 11935.93 6612.88 6426.75 7317.64 9063.06 10289.09 9216.68 TRUE FALSE 9069.051293 12015.61293 11228.11805 12855.2374 6349.474987 6790.627031 6829.493587 8983.822622 11358.67773 10358.5119 0.87551681 1.159974816 1.083950876 1.241031291 0.612971733 0.655560094 0.659312231 0.867288922 1.096554972 1 13.33852914 -6.257563829 24.99928253 0.792861255 1.094667647 0.385902903 0.168390125 347.2452569 2239907.842 0.052609497 0.065353791 5.53E-07 6.257563829 0.301806392 YGPADVEDTTGSGATDSKDDDDIDLFGS(ph)DDEEESEEAKR ddPTM_A459_MK2206_30min_R2 2 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR 39 2 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 1 YGPADVEDT(0.037)T(0.037)GS(0.134)GAT(0.124)DS(0.114)KDDDDIDLFGS(0.553)DDEEESEEAKR;YGPADVEDT(0.185)T(0.185)GS(0.039)GAT(0.003)DS(0.01)KDDDDIDLFGS(0.577)DDEEES(0.001)EEAKR 60.815 3.41E-05 104267000 185158 189997 181434 163466 179251 87583 208275 147879 131986 208658 TRUE FALSE 199333.8388 180562.0253 187482.919 150110.3049 172212.7051 90916.03244 180928.2423 167207.293 143465.9037 201849.5065 0.987536914 0.894537858 0.928825253 0.743674371 0.853173773 0.450414935 0.896352166 0.828376031 0.710756772 1 17.62292053 -5.754701727 24.07774633 0.769856708 0.932723888 0.202695104 0.137852273 150.3145006 537154.0598 0.036784056 0.061822292 1.76E-06 5.754701727 0.16286718 YGQCWVFAAVACT(ph)VLR ddPTM_A459_MK2206_30min_R2 1 YGQCWVFAAVACTVLR 16 0 P21980-2;P21980 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 1 YGQCWVFAAVACT(1)VLR 93.243 0.023755 9466200 5100.6 9003.1 7258.5 9511.1 7807.3 6803.4 8936.2 7705.6 8808.2 7249.8 TRUE FALSE 5491.105858 8556.019146 7500.494767 8734.012705 7500.746173 7062.308154 7762.866206 8712.748377 9574.321314 7013.23962 0.782962818 1.219981009 1.069476472 1.245360658 1.06951232 1.006996558 1.106887348 1.242328631 1.365178125 1 12.77586531 -7.695570113 5.154222534 1.227788859 1.079778005 0.138597568 0.145567101 0.349735618 17.65408963 0.069461438 0.038294147 2.02E-08 7.695570113 -0.148010853 YGQFSGLNPGGRPIT(ph)PPR ddPTM_A459_MK2206_30min_R1 3 YGQFSGLNPGGRPITPPR 18 1 P62136-3;P62136;P62136-2 P62136-3 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit 1 YGQFSGLNPGGRPIT(1)PPR;YGQFSGLNPGGRPIT(1)PPR;YGQFSGLNPGGRPIT(1)PPR 102.03 0.012219 330150000 7083.2 6103 6790.2 5595.5 6912.1 6650.6 7205.7 6496.8 5954.2 5712.5 TRUE FALSE 6480.736645 5705.693591 6329.300143 6026.46638 6636.77642 7027.151225 6725.020901 6439.999163 6573.160397 6420.207627 1.009427891 0.888708578 0.985840414 0.938671571 1.033732366 1.094536444 1.047477168 1.003082694 1.023823649 1 12.64840424 -6.269936587 22.43906789 1.037652684 0.95303531 0.496140369 0.038408654 121.9331465 321995.3269 0.011753176 0.013578292 5.37E-07 6.269936587 -0.084617374 YGQFSGLNPGGRPIT(ph)PPR ddPTM_A459_MK2206_30min_R2 1 YGQFSGLNPGGRPITPPR 18 1 P62136-3;P62136;P62136-2 P62136-3 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit 1 YGQFSGLNPGGRPIT(1)PPR 86.136 0.010203 128120000 124170 120380 130480 140730 133510 133160 128880 100310 119550 135910 TRUE FALSE 133676.5507 114402.1042 134830.1381 129231.9088 128267.7266 138227.4971 111957.9012 113420.8614 129948.2429 131475.2678 1.016742942 0.870141633 1.02551712 0.982937027 0.975603463 1.05135741 0.851551041 0.862678307 0.988385459 1 17.00443191 -7.264447194 24.99912882 0.914210231 0.982777182 0.174267445 0.063139089 435.5315714 3619844.33 0.025255358 0.017857759 5.44E-08 7.264447194 0.068566951 YGRPPDSHHSR ddPTM_A459_MK2206_30min_R2 1 YGRPPDSHHSR 11 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 0 105.13 0.0094537 3601700 3219.3 15480 7033.8 28122 31806 46996 24116 11156 29303 8779.3 FALSE TRUE 3465.772083 14711.28571 7268.303381 25824.34264 30557.13663 48784.46571 20949.54023 12614.1275 31851.72197 8492.83216 0.408082018 1.732200217 0.855816204 3.040722124 3.597991348 5.744192843 2.466731926 1.48526749 3.750424048 1 13.05203002 -5.767921377 21.04985954 3.147926567 1.072048239 0.342249826 1.268192071 23.76503583 77179.11853 0.366663373 0.561889602 1.71E-06 5.767921377 -2.075878329 YGS(ph)FEEAEASYPILNR ddPTM_A459_MK2206_30min_R1 2 YGSFEEAEASYPILNR 16 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 YGS(1)FEEAEASYPILNR;YGS(1)FEEAEASYPILNR 182.37 9.22E-07 12189900 3252.66 3268.09 3369.56 3275.98 3067.07 3328.51 3104.8 3272.46 3619.39 2685.39 TRUE FALSE 2976.004187 3055.336747 3140.843655 3528.296547 2944.902107 3516.96736 2897.684457 3243.849227 3995.638543 3018.076387 0.986059929 1.012345731 1.040677323 1.169054754 0.975754663 1.165300976 0.960109714 1.074806867 1.32390239 1 11.55941361 -2.472312702 0.442548986 1.101440297 5.17E-09 0.115323152 0.103234029 82.66782391 2.323814495 0.065605379 72.99041347 0.003370445 2.472312702 -1.101440292 YGS(ph)FEEAEASYPILNR ddPTM_A459_MK2206_30min_R2 2 YGSFEEAEASYPILNR 16 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 YGS(1)FEEAEASYPILNR;YGS(1)FEEAEASYPILNR 172.09 6.86E-06 4097100 12517.3 13781.9 12171.6 10280.2 9883.1 10582.7 13402.7 12483.2 12244.3 11247.9 TRUE FALSE 13475.63411 13097.51089 12577.39507 9440.274775 9495.039835 10985.43206 11642.90939 14114.7971 13309.28708 10880.88194 1.23846892 1.203717764 1.155916876 0.867601985 0.872635131 1.009608607 1.07003361 1.297210757 1.22318091 1 13.40950788 -10.31081074 15.32333119 0.999990275 1.096819071 0.043897587 0.142207855 0 0 0.156959718 0.038068323 4.89E-11 10.31081074 0.096828796 YGS(ph)IVDDER ddPTM_A459_MK2206_30min_R2 2 YGSIVDDER 9 0 Q13576 Q13576 IQGAP2 Ras GTPase-activating-like protein IQGAP2 1 YGS(1)IVDDER;YGS(1)IVDDER 117.14 0.0076278 10267200 121706 123926 120295 80251 62306 55155 59584 52568 45047 58480 TRUE FALSE 131023.9049 117772.015 124305.5753 73694.23659 59859.55338 57253.96217 51760.54923 59438.81809 48965.10663 56571.80239 2.316063823 2.081814792 2.197306255 1.302667291 1.058116426 1.0120583 0.914953158 1.050679236 0.865539095 1 15.78779552 -5.861437248 2.676582506 0.986761791 2.213403805 0.97664078 0.083928521 0.036209685 0.525308992 0.025236573 0.041958359 1.38E-06 5.861437248 1.226642014 up YGS(ph)PPQRDPNWNGER ddPTM_A459_MK2206_30min_R1 1 YGSPPQRDPNWNGER 15 1 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 YGS(1)PPQRDPNWNGER 103.6 0.026316 32123000 2009.5 2108.3 2242.2 1581.3 1982.4 1791.2 2086.8 1913.9 1850.8 1932.5 TRUE FALSE 1838.581473 1971.049287 2090.005711 1703.092 1903.43681 1892.616196 1947.59338 1897.166974 2043.197283 2171.91269 0.84652642 0.907517736 0.962288089 0.78414386 0.876387352 0.871405285 0.896718081 0.873500571 0.940736381 1 11.08475039 -8.506909859 2.41000617 0.999886053 0.878058238 0.459005362 0.042761548 0.261371953 3.515717421 0.041315476 0.011285619 3.11E-09 8.506909859 -0.121827815 YGVIILDEAHER ddPTM_A459_MK2206_30min_R1 1 YGVIILDEAHER 12 0 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 0 94.122 0.027204 3078500 2776.6 3037.7 3018.7 2358.1 2860.3 2700 2665.1 2581.8 2321.3 2126.9 FALSE TRUE 2540.435589 2839.945178 2813.799055 2539.721271 2746.368194 2852.871667 2487.316042 2559.227595 2562.607442 2390.396429 1.06276748 1.188064516 1.17712653 1.062468651 1.14891746 1.193472192 1.040545414 1.07062894 1.072042867 1 11.22303418 -7.93249634 0.838814188 1.013011263 1.139176347 0.410225665 0.050231245 0.593782902 0.799402027 0.04700026 0.01934578 1.17E-08 7.93249634 0.126165084 YGVYEDENYEVGS(ph)DDEEIPFK ddPTM_A459_MK2206_30min_R1 2 YGVYEDENYEVGSDDEEIPFK 21 0 O15541 O15541 RNF113A RING finger protein 113A 1 YGVYEDENYEVGS(1)DDEEIPFK;YGVYEDENYEVGS(1)DDEEIPFK 115.2 5.12E-05 19623800 12905.7 14220.2 13606.2 12536 12995.9 12054.1 13277.1 12144.3 11304.6 10819.7 TRUE FALSE 11808.00244 13294.4624 12682.64905 13501.52489 12478.24578 12736.59273 12391.40888 12038.12367 12479.75362 12160.12612 0.971042761 1.093283266 1.04297019 1.110311255 1.026160885 1.047406301 1.019019767 0.989967007 1.026284884 1 13.56987057 -7.237033484 1.82756333 1.005264443 1.054338745 0.221776552 0.036355281 0.500459838 3.26590083 0.018305933 0.01164583 5.79E-08 7.237033484 0.049074302 YHAEEVEER ddPTM_A459_MK2206_30min_R1 2 YHAEEVEER 9 0 Q6NZY4;Q6NZY4-2;F5H6J5;F5GX80 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 0 ; 146.79 0.0024002 5665300 2465.99 2676.2 2688.8 2676.6 2314.01 2187.05 2494.45 2269.7 1955.86 2223.96 FALSE TRUE 2256.244601 2501.978894 2506.291747 2882.752196 2221.838082 2310.878881 2328.049792 2249.856252 2159.178646 2499.480955 0.902685254 1.000999383 1.002724883 1.153340333 0.888919788 0.924543504 0.931413295 0.900129384 0.863850809 1 11.28741282 YHEEFEK ddPTM_A459_MK2206_30min_R1 4 YHEEFEK 7 0 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 0 ;;; 130.04 0.0062264 50922100 25577.9 29005.2 30186 26644.9 25055.5 22336.6 25451.6 24847.3 20403.3 20907.1 FALSE TRUE 23402.36529 27116.95621 28137.05842 28697.09481 24057.48638 23601.27899 23753.7702 24630.06268 22524.29605 23497.22939 0.995962754 1.154049091 1.197462814 1.22129696 1.023843534 1.004428165 1.010917918 1.048211356 0.9585937 1 14.52020303 -6.374312638 6.72765447 1.008732464 1.146612177 0.553093775 0.059291906 0.195729854 10.34042037 0.019133241 0.021698169 4.22E-07 6.374312638 0.137879713 YHEEFEK ddPTM_A459_MK2206_30min_R2 2 YHEEFEK 7 0 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 0 ; 149.4 0.0036641 33967000 246550 325840 238490 318000 310750 277480 335380 236770 223120 303040 FALSE TRUE 265426.0576 309659.2594 246441.1376 292018.3828 298548.3936 288039.6958 291344.2031 267716.652 242526.5743 293151.8296 0.905421801 1.056310171 0.840660411 0.996133584 1.018408768 0.982561481 0.993833822 0.91323548 0.827307046 1 18.16128854 -7.856750016 6.058102849 0.900272095 0.971940349 0.118725247 0.068872401 0.367058224 19.18349687 0.036672313 0.017385739 1.39E-08 7.856750016 0.071668254 YHGHS(ph)MSDPGVSYR ddPTM_A459_MK2206_30min_R1 4 YHGHSMSDPGVSYR 14 0 P08559-3;P08559;P08559-2;P08559-4;Q5JPU3;P29803 P08559-3 PDHA1;PDHA2 "Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial" 1 YHGHS(0.998)MS(0.002)DPGVSYR;YHGHS(0.995)MS(0.005)DPGVSYR;YHGHS(0.976)MS(0.024)DPGVSYR;Y(0.001)HGHS(0.995)MS(0.004)DPGVSYR 162.7 0.000181 328125000 16642.6 14898.4 13877.3 13161.3 18059.1 16805.4 15685.9 14412.8 11622.5 11262.8 TRUE FALSE 15227.05948 13928.51145 12935.34754 14174.98561 17339.76781 17756.90723 14639.52223 14286.79041 12830.70047 12658.12069 1.202947882 1.100361719 1.021901106 1.119833343 1.369853253 1.402807546 1.156532047 1.128665997 1.013633917 1 13.62777561 -8.103456158 2.254011566 0.999996312 1.197222349 0.32234557 0.109333566 0.454162548 4.134269656 0.110508179 0.034793508 7.88E-09 8.103456158 0.197226037 YHGHS(ph)MSDPGVSYR ddPTM_A459_MK2206_30min_R2 5 YHGHSMSDPGVSYR 14 0 P08559-3;P08559;P08559-2;P08559-4;Q5JPU3;P29803 P08559-3 PDHA1;PDHA2 "Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial" 1 Y(0.006)HGHS(0.976)MS(0.018)DPGVSYR;Y(0.006)HGHS(0.651)MS(0.343)DPGVSYR;YHGHS(0.891)MS(0.109)DPGVSYR;Y(0.001)HGHS(0.733)MS(0.266)DPGVSYR;YHGHS(0.961)MS(0.039)DPGVSYR 110.25 0.0043092 63783200 116390 220562 145916 238064 180602 214495 227424 152335 194180 242014 TRUE FALSE 125300.9079 209609.2118 150780.7666 218613.4097 173510.658 222657.7575 197562.9556 172245.7075 211069.4254 234117.103 0.535206127 0.895317809 0.644039947 0.93377804 0.741127649 0.951052933 0.843863832 0.735724581 0.901554917 1 17.83687081 -4.754662055 24.99955667 0.837155195 0.535205614 0.436152315 0.106397981 217.5389301 802365.4211 0.024532615 0.233809259 1.76E-05 4.754662055 -0.301949582 YHGHSMS(ph)DPGVS(ph)YR ddPTM_A459_MK2206_30min_R2 1 YHGHSMSDPGVSYR 14 0 P08559-3;P08559;P08559-2;P08559-4;Q5JPU3;P29803 P08559-3 PDHA1;PDHA2 "Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial" 2 YHGHS(0.234)MS(0.766)DPGVS(1)YR 123.68 0.028994 6466800 10118 16666 17463 21430 15381 20294 18847 16258 25893 22632 TRUE FALSE 10892.64186 15838.39067 18045.2077 19679.10045 14777.06466 21066.30239 16372.36626 18382.97642 28145.12634 21893.51969 0.497528128 0.723428252 0.824225979 0.898855037 0.674951532 0.96221634 0.747817916 0.839653773 1.285545985 1 14.41821629 -3.921885611 0.219453924 1.067640123 7.68E-16 0.486924041 0.144875749 17.63545803 0.552882351 0.254131588 5.429061663 0.000119706 3.921885611 -1.067640123 YHGHSMS(ph)DPGVSYR ddPTM_A459_MK2206_30min_R1 1 YHGHSMSDPGVSYR 14 0 P08559-3;P08559;P08559-2;P08559-4;Q5JPU3;P29803 P08559-3 PDHA1;PDHA2 "Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial" 1 YHGHS(0.226)MS(0.774)DPGVSYR 120.59 0.0077556 3397300 1025.8 838.37 888.29 679.46 1183.6 1086.7 935.43 710.6 733.4 546.95 TRUE FALSE 938.5503233 783.7919606 827.9953497 731.7921269 1136.454706 1148.228015 873.0291715 704.3872991 809.6395545 614.7102953 1.526817316 1.275059108 1.346968411 1.190466684 1.848764718 1.867917332 1.420228648 1.145884988 1.317107523 1 9.263762838 -7.676521683 4.859677457 1.173851996 1.503051525 0.341938624 0.21921152 0.285834195 11.71706817 0.121205136 0.066817613 2.11E-08 7.676521683 0.329199529 YHGHSMS(ph)DPGVSYR ddPTM_A459_MK2206_30min_R2 1 YHGHSMSDPGVSYR 14 0 P08559-3;P08559;P08559-2;P08559-4;Q5JPU3;P29803 P08559-3 PDHA1;PDHA2 "Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial" 1 YHGHS(0.016)MS(0.984)DPGVSYR 127.78 0.0011884 11080000 26611 40876 26728 42118 36358 49429 43977 25278 41191 36802 TRUE FALSE 28648.35862 38846.15728 27619.09818 38676.82467 34930.40224 51310.05523 38202.76707 28581.92139 44773.71872 35601.15375 0.804703095 1.09114883 0.775792222 1.086392451 0.981159276 1.441246977 1.073076658 0.802836941 1.257647969 1 15.11963638 -5.850996537 10.3743572 1.093155757 0.91078985 0.209531437 0.17781031 0.623882361 67.16487891 0.050372264 0.07480028 1.41E-06 5.850996537 -0.182365907 YHGLS(ph)PSSQAR ddPTM_A459_MK2206_30min_R2 2 YHGLSPSSQAR 11 0 V9GYB6;O94761 V9GYB6 RECQL4 ATP-dependent DNA helicase Q4 1 Y(0.089)HGLS(0.878)PS(0.029)S(0.004)QAR;Y(0.023)HGLS(0.873)PS(0.072)S(0.031)QAR 96.067 0.020599 10336900 23712 32881 24867 31186 36074 33156 36989 31321 24440 37496 TRUE FALSE 25527.40895 31248.17735 25696.05337 28638.00404 34657.5535 34417.77481 32132.29987 35414.76224 26565.74702 36272.50859 0.703767397 0.861483767 0.70841677 0.789523668 0.95547716 0.94886668 0.885858219 0.976352715 0.732393431 1 15.1465889 -6.171906638 5.492620752 0.915126684 0.765984693 0.459503194 0.080305308 0.210009706 10.05402248 0.02274581 0.029559285 6.73E-07 6.171906638 -0.14914199 YHGRT(ph)HTGEK ddPTM_A459_MK2206_30min_R1 1 YHGRTHTGEK 10 1 Q8N7K0-2;Q8N7K0 Q8N7K0-2 ZNF433 Zinc finger protein 433 1 YHGRT(0.637)HT(0.363)GEK 96.64 0.029737 69317000 13899 15257 14645 13318 14336 12914 13306 13470 12008 9960.6 TRUE FALSE 12716.81706 14263.76653 13650.9382 14343.75467 13764.96676 13645.17952 12418.38102 13352.23321 13256.27457 11194.59433 1.135978374 1.274165558 1.219422322 1.281310805 1.229608359 1.218907905 1.109319432 1.192739354 1.184167482 1 13.45051463 -9.759272465 0.343815779 0.943475598 1.236361842 0.637726793 0.048138199 4.077315249 0.583678723 0.342680001 0.044189561 1.74E-10 9.759272465 0.292886244 YHIEVNR ddPTM_A459_MK2206_30min_R2 1 YHIEVNR 7 0 Q15029-3;Q15029;Q15029-2 Q15029-3 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component 0 119.56 0.014134 2775900 6329.6 7374.2 7307.4 6508.3 6933 8060.3 9532.7 8647.6 5474.1 7441.1 FALSE TRUE 6814.199043 7008.007951 7551.025069 5976.551071 6660.775584 8367.040365 8281.045039 9777.871012 5950.227323 7198.297516 0.946640373 0.973564643 1.049001525 0.830272861 0.925326519 1.162363787 1.150417167 1.358358833 0.82661592 1 12.81344002 -6.758197862 24.90323818 1.125127706 0.945958689 0.232529832 0.136520464 103.8977747 798203.4997 0.044719535 0.042963695 1.75E-07 6.758197862 -0.179169017 YHPGYFGK ddPTM_A459_MK2206_30min_R1 1 YHPGYFGK 8 0 P46776;E9PLL6 P46776 RPL27A 60S ribosomal protein L27a 0 101.69 0.023644 12735000 6640.1 6994.8 6221.9 5665.1 6559.8 5788.3 7114.9 5496.8 6031 5928.7 FALSE TRUE 6075.324626 6539.437249 5799.574763 6101.426984 6298.509275 6116.028544 6640.278003 5448.742057 6657.944032 6663.192115 0.911773895 0.98142709 0.870389847 0.91569129 0.945269049 0.917882666 0.996561091 0.817737499 0.999212377 1 12.70199778 -8.444702125 24.99999996 1.000032626 0.922323924 0.303777304 0.048312846 114.8343679 36721.74244 0.043583365 0.011253177 3.59E-09 8.444702125 -0.077708702 YHPGYFGK ddPTM_A459_MK2206_30min_R2 1 YHPGYFGK 8 0 P46776;E9PLL6 P46776 RPL27A 60S ribosomal protein L27a 0 94.662 0.031633 16787000 181070 187080 166450 182610 186350 181420 212060 159530 148270 196090 FALSE TRUE 194932.8584 177789.8792 171999.3599 167690.1789 179032.9627 188324.0652 184216.2673 180381.1187 161166.2566 189691.5994 1.027630423 0.937257527 0.906731561 0.884014787 0.943810708 0.99279075 0.971135611 0.950917802 0.84962253 1 17.53329626 -4.76168205 8.377557227 0.93613695 1.02854303 0.269370398 0.044560736 0.125001374 91.76043169 0.011402392 0.065752488 1.73E-05 4.76168205 0.09240608 YHSDFNR ddPTM_A459_MK2206_30min_R1 2 YHSDFNR 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3;K7EII0 Q15424-2 SAFB Scaffold attachment factor B1 0 ; 115.46 0.018306 16545400 1653.35 1703.28 2117.8 1813.29 1991.03 1979.02 2335.5 1824.23 1055.84 1408.39 FALSE TRUE 1512.7239 1592.396162 1974.049637 1952.94991 1911.723059 2091.070402 2179.703056 1808.280949 1165.598346 1582.871986 0.955683033 1.006017023 1.247131577 1.23380155 1.20775595 1.321060971 1.377055805 1.142405049 0.736381942 1 10.62832887 -8.139693051 5.901201156 0.872931875 1.198674364 0.472567919 0.134952701 0.203564882 8.762138894 0.101353986 0.037228478 7.25E-09 8.139693051 0.325742489 YHSDFNR ddPTM_A459_MK2206_30min_R2 4 YHSDFNR 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3;K7EII0 Q15424-2 SAFB Scaffold attachment factor B1 0 ;;; 167.82 5.04E-05 24242100 9515.76 13868.83 12628.8 13041.6 12826.4 8820.49 13207.64 11571.8 10367.2 8068.21 FALSE TRUE 10244.2939 13180.12407 13049.83789 11976.05956 12322.77109 9156.159928 11473.461 13084.27399 11268.92032 7804.944968 1.312538902 1.688688917 1.671996144 1.534419475 1.578841509 1.173122932 1.470024587 1.676408232 1.443818036 1 12.93017274 YHTINGHNAEVR ddPTM_A459_MK2206_30min_R1 6 YHTINGHNAEVR 12 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;;;; 190.36 7.66E-05 143439800 7743.07 7117.47 7845.63 6018.9 8486.99 6986.93 8029.41 7117.41 5756.05 5754.05 FALSE TRUE 7084.481236 6654.121409 7313.090495 6482.476721 8148.935217 7382.523939 7493.782709 7055.183235 6354.411996 6466.905155 1.095497934 1.0289499 1.130848577 1.002407885 1.260098149 1.141585312 1.158789642 1.090967482 0.982604792 1 12.65885974 -8.186440625 4.230652884 0.990589054 1.11646539 0.352775397 0.066852493 0.249445036 8.180830021 0.052982149 0.017797401 6.51E-09 8.186440625 0.125876336 YHTINGHNAEVR ddPTM_A459_MK2206_30min_R2 7 YHTINGHNAEVR 12 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;;;;; 163.45 0.0002541 90193600 26381.8 40951.9 29458.6 39749.4 46921.5 43933.2 45820.2 33600.4 31041.1 43261.2 FALSE TRUE 28401.61089 38918.2882 30440.73502 36501.74687 45079.12615 45605.10871 39803.9527 37992.08765 33740.99877 41849.59059 0.678659229 0.929956247 0.727384297 0.872212759 1.077170063 1.089738467 0.951119286 0.907824596 0.806244417 1 15.35292589 -6.011426483 9.692350575 0.972527652 0.794673053 0.444115899 0.096967751 0.237949106 186.1828362 0.02932282 0.040325191 9.74E-07 6.011426483 -0.177854599 YHTINGHNCEVK ddPTM_A459_MK2206_30min_R1 1 YHTINGHNCEVK 12 0 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 113.52 0.0083191 5813300 2406.9 2374.3 2736.4 1996.9 2579.9 2381.6 3060.1 2370.6 1940.5 2528.2 FALSE TRUE 2202.180516 2219.732638 2550.660792 2150.701584 2477.13712 2516.444134 2855.966312 2349.874094 2142.221919 2841.412503 0.775030205 0.781207458 0.89767353 0.756912832 0.871797783 0.8856314 1.005122033 0.827009134 0.753928519 1 11.47239258 -6.439343804 6.551475761 0.889266737 0.808094505 0.23653168 0.077692446 0.427842126 27.97128213 0.02482857 0.028062859 3.64E-07 6.439343804 -0.081172233 YHTINGHNCEVK ddPTM_A459_MK2206_30min_R2 1 YHTINGHNCEVK 12 0 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 104.07 0.0057051 3808200 14650 22713 13460 21903 24045 23090 23470 16037 16926 19641 FALSE TRUE 15771.61526 21585.10545 13908.74968 20113.45484 23100.87248 23968.70613 20388.36081 18133.09096 18398.19288 19000.11578 0.830079956 1.136051259 0.732034996 1.058596435 1.215827985 1.261503162 1.073065083 0.954367393 0.968320041 1 14.21372059 -4.745876167 24.47320974 1.046709183 0.830079178 0.171560992 0.14121935 1341.472473 2109317.229 0.037984636 0.887503269 1.80E-05 4.745876167 -0.216630005 YHTSQSGDEMTSLSEYVSR ddPTM_A459_MK2206_30min_R1 1 YHTSQSGDEMTSLSEYVSR 19 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 88.282 0.0044524 3398300 1104.5 1540.7 1616.7 1283.7 1082.5 1153.8 1183.1 1053.5 1645.1 1577.2 FALSE TRUE 1010.556475 1440.40015 1506.962908 1382.570796 1039.381733 1219.127159 1104.177558 1044.289361 1816.114032 1772.595443 0.570099894 0.812593847 0.850144862 0.779969734 0.586361506 0.687763902 0.622915715 0.589130117 1.024550773 1 10.79164759 -8.271956693 24.9451577 1.01227547 0.694556277 0.653776063 0.094459622 515.5218357 1222710.266 0.094694768 0.025511769 5.35E-09 8.271956693 -0.317719193 YHTVNGHNCEVR ddPTM_A459_MK2206_30min_R1 3 YHTVNGHNCEVR 12 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8VZ49;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 0 ;; 147.28 0.0087792 84826500 1950.66 1521.45 1985.89 1719.98 2154.41 1834.02 1780.07 1845.03 1399.75 1642.4 FALSE TRUE 1784.746124 1422.403328 1851.09332 1852.453158 2068.595288 1937.860627 1661.324778 1828.899097 1545.259022 1845.872911 0.966884617 0.770585732 1.002828152 1.003564842 1.120659648 1.049834263 0.900021214 0.990804451 0.837142694 1 10.85008751 -5.293084371 24.27863155 0.99212324 0.868735134 0.239643561 0.084811465 566.3478433 434511.7364 0.022750885 0.047368141 5.09E-06 5.293084371 -0.123388107 YHTVNGHNCEVR ddPTM_A459_MK2206_30min_R2 4 YHTVNGHNCEVR 12 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8VZ49;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed" 0 ;;; 158.34 0.00025556 91383000 10493.12 14115.4 9199.78 15816.8 11241.75 16463.42 17277.07 13675.85 10362.65 12523.9 FALSE TRUE 11296.48134 13414.44976 9506.496074 14524.51684 10800.34241 17089.94698 15008.56996 15463.33055 11263.97457 12115.24617 0.932418638 1.107237078 0.784672135 1.198862709 0.891467021 1.410614918 1.238816756 1.27635298 0.929735509 1 13.5645361 -5.788531849 24.99879649 1.152283429 0.958021876 0.209989554 0.168967458 321.2339178 296408.115 0.047272267 0.070135951 1.63E-06 5.788531849 -0.194261553 YHYLGGR ddPTM_A459_MK2206_30min_R1 1 YHYLGGR 7 0 Q8NCW5-2;Q8NCW5 Q8NCW5-2 APOA1BP NAD(P)H-hydrate epimerase 0 97.596 0.031471 3822000 2431.7 2984.2 2852.9 2477.2 3048.9 2908.8 2756 2566.2 2165.7 2169.7 FALSE TRUE 2224.871146 2789.928038 2659.253097 2667.994373 2927.455857 3073.493742 2572.152269 2543.763984 2390.832265 2438.498816 0.912393777 1.144117036 1.090528763 1.094113458 1.200515595 1.260404033 1.054809726 1.043168021 0.980452502 1 11.25177756 -7.661442244 3.124177209 1.005001322 1.121468568 0.238846631 0.086299081 0.376012706 7.277807035 0.049509419 0.025231056 2.18E-08 7.661442244 0.116467247 YHYLGGR ddPTM_A459_MK2206_30min_R2 1 YHYLGGR 7 0 Q8NCW5-2;Q8NCW5 Q8NCW5-2 APOA1BP NAD(P)H-hydrate epimerase 0 96.048 0.04144 0 17174 14157 12600 15125 12204 12300 17008 11726 14843 11577 FALSE TRUE 18488.85464 13453.98397 13020.07771 13889.23912 11724.80964 12768.08512 14774.82917 13258.62846 16134.01731 11199.24344 1.650902112 1.201329718 1.162585471 1.240194411 1.046928724 1.140084613 1.319270293 1.183886084 1.440634575 1 13.45111365 -4.761491028 8.35994207 1.196512744 1.655499775 0.570627055 0.119189049 0.064095972 46.30945127 0.028748753 0.166475514 1.73E-05 4.761491028 0.458987031 YIDQEELNK ddPTM_A459_MK2206_30min_R1 2 YIDQEELNK 9 0 P07900;P07900-2;Q14568;P08238;Q58FF8 P07900;P08238;Q58FF8 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ; 189.38 0.020481 44877100 6644.6 6467 7199.8 6677.8 6090.3 6268.5 6445.4 6671.3 5710.8 5388.5 FALSE TRUE 6079.441878 6045.997125 6711.097636 7192.125313 5847.710455 6623.417053 6015.439126 6612.973527 6304.458096 6056.068061 1.00385957 0.99833705 1.108160867 1.187589908 0.965595234 1.09368273 0.993291202 1.091958258 1.041015067 1 12.5641657 -8.542967757 21.09754479 0.999999995 1.056470462 0.063383417 0.06395754 1550.030303 1627848.589 0.062061267 0.01602415 2.86E-09 8.542967757 0.056470467 YIDQEELNK ddPTM_A459_MK2206_30min_R2 2 YIDQEELNK 9 0 P07900;P07900-2;Q14568;P08238;Q58FF8 P07900;P08238;Q58FF8 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ; 171.56 0.0076871 41582500 74769 94073 74933 80887 79729 63362 85925 72792 61163 79718 FALSE TRUE 80493.37213 89401.47161 77431.22882 74278.27336 76598.43885 65773.28531 74642.94429 82306.16433 66482.84718 77116.80819 1.043785058 1.159299428 1.0040772 0.963191749 0.993278128 0.852904663 0.967920562 1.067292154 0.862105794 1 16.23475772 -5.460963132 4.464627134 0.959552675 1.100715228 0.431549858 0.064935369 0.192382478 7.617179386 0.017021614 0.036073983 3.46E-06 5.460963132 0.141162554 YIEIDS(ph)DEEPR ddPTM_A459_MK2206_30min_R1 2 YIEIDSDEEPR 11 0 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 YIEIDS(1)DEEPR;YIEIDS(1)DEEPR 152.38 0.00057931 9685900 4240.9 4814.3 4104.7 3287.58 4276.6 4269 5780.4 4100.1 5495.2 6955.6 TRUE FALSE 3880.189185 4500.888195 3826.0844 3540.789981 4106.253966 4510.707091 5394.800063 4064.253258 6066.445705 7817.31224 0.496358475 0.575759041 0.489437326 0.45294212 0.525276955 0.577015086 0.690109324 0.519904173 0.776027043 1 12.93245695 -8.82779164 0.520846857 1.020852515 0.504053979 0.849061863 0.062131377 0.527774306 0.296934161 0.083179913 0.032012578 1.49E-09 8.82779164 -0.516798536 YIEIDS(ph)DEEPR ddPTM_A459_MK2206_30min_R2 5 YIEIDSDEEPR 11 0 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 YIEIDS(1)DEEPR;YIEIDS(1)DEEPR;YIEIDS(1)DEEPR;YIEIDS(1)DEEPR;YIEIDS(1)DEEPR 151.55 0.00059399 29111400 126800.4 146479.7 129137.6 137571.9 136093.8 135071.6 153638.5 114584.5 128646 145302.1 TRUE FALSE 136508.3361 139205.7311 133442.9831 126331.8357 130750.0736 140211.8444 133465.5804 129561.0876 139835.3965 140560.9044 0.971168596 0.990358818 0.94936059 0.898769372 0.930202279 0.997516664 0.949521355 0.921743412 0.994838481 1 17.10083585 -6.729157927 24.99997745 0.966382874 0.947670445 0.114766632 0.032031096 616.2239193 477226.1633 0.011405215 0.011404544 1.87E-07 6.729157927 -0.018712429 YIEIDS(ph)DEEPRGELLSLR ddPTM_A459_MK2206_30min_R1 8 YIEIDSDEEPRGELLSLR 18 1 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 Y(0.001)IEIDS(0.999)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;Y(0.004)IEIDS(0.996)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR 133.52 0.0005971 48178700 12422.16 13074.39 12899 10428 13473.12 12595.22 12323.46 11759.45 10748.84 8951.36 TRUE FALSE 11365.59006 12223.24483 12023.45182 11231.16637 12936.4571 13308.35047 11501.38447 11656.63837 11866.22038 10060.32206 1.129744157 1.214995382 1.195135877 1.116382389 1.285888963 1.322855312 1.143242175 1.158674474 1.17950701 1 13.29638887 -9.137637058 0.889985314 0.999043576 1.203498018 0.47053571 0.062410338 2.187227296 2.376047258 0.069764889 0.021351915 7.28E-10 9.137637058 0.204454442 YIEIDS(ph)DEEPRGELLSLR ddPTM_A459_MK2206_30min_R2 8 YIEIDSDEEPRGELLSLR 18 1 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 Y(0.006)IEIDS(0.993)DEEPRGELLSLR;YIEIDS(0.998)DEEPRGELLS(0.002)LR;Y(0.001)IEIDS(0.999)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;Y(0.007)IEIDS(0.993)DEEPRGELLSLR;Y(0.194)IEIDS(0.806)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR 102.39 0.0012714 21911900 27010.2 33692.6 29469.72 39103.9 35082.29 34186.1 35245.3 28860.9 31065 32886.3 TRUE FALSE 29078.12168 32019.47448 30452.22576 35908.98628 33704.78302 35487.07599 30617.54977 32633.11872 33766.97755 31813.22272 0.914026282 1.006483208 0.957219142 1.128744063 1.059458305 1.115481959 0.962415849 1.025772177 1.061413295 1 14.95733891 -5.72158341 24.98665457 1.050957771 0.963966753 0.402763808 0.050807066 166.5617877 104420.2855 0.013967242 0.024191483 1.90E-06 5.72158341 -0.086991018 YIES(ph)PDVEK ddPTM_A459_MK2206_30min_R1 2 YIESPDVEK 9 0 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 Y(0.003)IES(0.997)PDVEK;YIES(1)PDVEK 124.1 0.0054157 8684500 5547.7 5439.8 5706.3 4340.2 4457.1 4046.2 4628.4 4226 4783.4 4836.7 TRUE FALSE 5075.838983 5085.668031 5318.972255 4674.482956 4279.564269 4275.292347 4319.647881 4189.052528 5280.651548 5435.906911 0.933761204 0.935569375 0.978488473 0.859926969 0.78727696 0.786491089 0.794650819 0.770626244 0.971438922 1 12.40830504 -5.881966111 5.263040423 0.833367442 0.947207877 0.230742103 0.076157837 0.247232988 10.37500803 0.020984268 0.031723302 1.31E-06 5.881966111 0.113840435 YILGNPLT(ph)PGVTQGPQIDK ddPTM_A459_MK2206_30min_R2 1 YILGNPLTPGVTQGPQIDK 19 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 YILGNPLT(0.997)PGVT(0.003)QGPQIDK 156.29 7.60E-06 6533600 48501 36950 35472 35804 27807 29175 32289 25382 23003 31038 TRUE FALSE 52214.27385 35115.11673 36654.61878 32878.69867 26715.15746 30285.27507 28049.41551 28699.51455 25003.75936 30025.2326 1.739013134 1.169520223 1.220793832 1.095035602 0.889756886 1.008660798 0.934194778 0.955846535 0.832758223 1 14.8738878 -1.522878745 0.60233386 0.933496398 49.78044133 0.890086262 0.081723705 50.66572133 0.389349024 0.035765515 3259.424309 0.03 1.522878745 48.84694493 YILGNPLTPGVT(ph)QGPQIDK ddPTM_A459_MK2206_30min_R2 1 YILGNPLTPGVTQGPQIDK 19 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 YILGNPLT(0.237)PGVT(0.763)QGPQIDK 140.89 0.00026135 6444800 61241 44159 51339 49129 38555 30911 37710 28755 25771 41543 TRUE FALSE 65929.65805 41966.12827 53050.61664 45115.00354 37041.13698 32087.33977 32758.6317 32513.37723 28012.515 40187.45531 1.640553191 1.044259407 1.32007902 1.122614089 0.921708943 0.798441691 0.815145708 0.809042946 0.697046249 1 15.29445761 -5.224450873 0.552572447 0.784559101 1.739428483 0.722266341 0.142979667 1.389522277 0.455871295 0.085064376 0.802306545 5.96E-06 5.224450873 0.954869381 YILGNPLTPGVTQGPQIDKEQYDK ddPTM_A459_MK2206_30min_R1 2 YILGNPLTPGVTQGPQIDKEQYDK 24 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 160.05 2.58E-12 52224000 4998.8 5273.5 5401.9 5474.8 5329.8 4380.7 5210.4 5295.2 3664.64 3758.4 FALSE TRUE 4573.62581 4930.194191 5035.234079 5896.470045 5117.50278 4628.731448 4862.823723 5248.904625 4045.592442 4224.018966 1.0827664 1.167180884 1.19204817 1.395938345 1.211524574 1.095812184 1.151231508 1.242632826 0.957759062 1 12.0444006 -8.265850138 24.93469764 0.978879496 1.194371346 0.514061024 0.083018162 325.7351226 1841392.645 0.076452922 0.022411396 5.42E-09 8.265850138 0.21549185 YILGNPLTPGVTQGPQIDKEQYDK ddPTM_A459_MK2206_30min_R2 2 YILGNPLTPGVTQGPQIDKEQYDK 24 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 142.23 7.55E-08 27311000 82598 114564 104911 111387 111089 97534 126843 84917 86871 95938 FALSE TRUE 88921.76639 108874.9184 108408.6804 102286.3258 106727.0877 101245.7247 110188.3617 96015.94346 94426.88255 92807.55092 0.958130729 1.173125648 1.168101941 1.10213366 1.149982805 1.090921199 1.187277982 1.034570383 1.017448275 1 16.50195457 -7.910355509 7.174743986 1.014404129 1.121883961 0.362921267 0.061831807 0.226750608 15.18863567 0.032903334 0.015669357 1.23E-08 7.910355509 0.107479832 YIMTRLY(ph)K ddPTM_A459_MK2206_30min_R1 1 YIMTRLYK 8 1 E9PFK9;Q9UJ41;Q9UJ41-4;Q9UJ41-3;A0A0A0MSJ3;Q3HKR1 E9PFK9 RABGEF1 Rab5 GDP/GTP exchange factor 1 YIMT(0.005)RLY(0.995)K 83.753 0.044487 0 1120.8 1159.2 1068.8 1133.9 1073.9 1097.2 1081.3 1069.4 1281.2 877.91 TRUE FALSE 1025.470074 1083.735869 996.2528338 1221.233174 1031.124289 1159.322516 1009.16845 1060.050349 1414.385325 986.6721187 1.039322035 1.098374879 1.009710131 1.237729486 1.045052626 1.174982544 1.02280021 1.074369417 1.433490719 1 9.946426932 -4.796242706 0.487430916 1.144208932 0.976000409 0.061012855 0.124636188 15.27596246 2.830428606 0.08091606 1.485520781 1.60E-05 4.796242706 -0.168208523 YIQHTYR ddPTM_A459_MK2206_30min_R1 2 YIQHTYR 7 0 J3KTF8;J3QQX2;P52565;J3KRY1;P52565-2 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 0 ; 128.86 0.0068086 34595000 9153.3 9494.2 9709.3 7728.7 8866.2 8878.6 10124.5 8739.2 4732.3 7264.5 FALSE TRUE 8374.763769 8876.125854 9050.259768 8323.965813 8513.04048 9381.298659 9449.113078 8662.794096 5224.23952 8164.481104 1.025755791 1.0871635 1.108491728 1.019533968 1.042692165 1.149037953 1.157343983 1.061034251 0.639874041 1 12.99514548 -8.13481868 7.827181114 0.821740846 1.085387476 0.565139773 0.091886414 0.174666166 10.127663 0.058563035 0.021960442 7.33E-09 8.13481868 0.26364663 YIQHTYR ddPTM_A459_MK2206_30min_R2 4 YIQHTYR 7 0 J3KTF8;J3QQX2;P52565;J3KRY1;P52565-2 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 0 ;;; 129.68 0.0064026 33617800 108374 119816 127686 109345 117300 124908 122314 97700.1 124974 116681 FALSE TRUE 116671.1968 113866.1117 131942.9875 100411.1637 112694.2126 129661.4615 106254.0249 110469.8385 135844.0126 112873.7085 1.033643692 1.008792155 1.168943497 0.889588594 0.998409763 1.14873041 0.941353184 0.978703012 1.203504469 1 16.78434996 -8.228922655 24.97486622 1.101752495 1.022010353 0.10904665 0.092270277 1254.985774 963909.735 0.06059432 0.022899034 5.90E-09 8.228922655 -0.079742142 YIS(ph)PDQLADLYK ddPTM_A459_MK2206_30min_R1 1 YISPDQLADLYK 12 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 Y(0.003)IS(0.996)PDQLADLYK 139.58 0.0011459 17546000 3466.8 3734.7 3862.1 3020.5 3087.9 2635.1 3752.4 3291.1 2919.5 2979.1 TRUE FALSE 3171.930455 3491.570351 3599.951412 3253.139433 2964.902404 2784.297085 3502.084243 3262.32626 3222.992473 3348.173399 0.947361465 1.042828413 1.075198618 0.971616176 0.885528332 0.831586884 1.0459686 0.974360008 0.962612173 1 11.70915853 -5.986223717 22.2860846 0.945874 1.023817521 0.204806383 0.062920804 100.3314972 162301.5705 0.018779796 0.027827433 1.03E-06 5.986223717 0.07794352 YIS(ph)PDQLADLYK ddPTM_A459_MK2206_30min_R2 3 YISPDQLADLYK 12 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 YIS(0.979)PDQLADLY(0.021)K;Y(0.01)IS(0.99)PDQLADLYK;YIS(1)PDQLADLYK 115.8 0.0051666 5686700 20245.9 22017.3 22179.5 27283.3 24178.9 24122.6 26055.5 20396.7 20243.3 23391.7 TRUE FALSE 21795.94167 20923.9529 22918.95346 25054.16712 23229.5149 25040.60245 22634.38155 23062.61872 22004.02564 22628.43074 0.963210481 0.924675384 1.012838836 1.107198612 1.026563227 1.10659916 1.000262979 1.019187719 0.972406169 1 14.46584892 -5.388769654 4.921283789 1.03694923 0.944988798 0.404028862 0.042364632 0.20356523 7.191361938 0.01140918 0.024603411 4.09E-06 5.388769654 -0.091960432 YISENES(ph)PRPSQK ddPTM_A459_MK2206_30min_R1 1 YISENESPRPSQK 13 1 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 YIS(0.001)ENES(0.633)PRPS(0.366)QK 112.62 0.023007 5060300 1534.5 1625 1153.4 1151.9 1024.1 976.91 1228.8 935.37 1116.2 906.8 TRUE FALSE 1403.982717 1519.212205 1075.110422 1240.619538 983.3079284 1032.2218 1146.828994 927.1921587 1232.232984 1019.14123 1.3776135 1.490678779 1.054917994 1.217318563 0.96483971 1.012834894 1.125289568 0.909777891 1.209089524 1 9.993138275 -5.266199082 24.75881037 1.061152311 1.434146156 0.700013921 0.097510088 159.536242 829873.3633 0.0242757 0.053358981 5.42E-06 5.266199082 0.372993844 YISENES(ph)PRPSQK ddPTM_A459_MK2206_30min_R2 1 YISENESPRPSQK 13 1 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 YIS(0.003)ENES(0.934)PRPS(0.062)QK 147.56 0.0027058 7094800 17844 17026 17049 19974 19234 15743 18836 15107 13811 17293 TRUE FALSE 19210.15036 16180.5136 17617.40515 18342.06031 18478.77652 16342.1109 16362.81057 17081.53677 15012.25582 16728.73083 1.148332803 0.967229001 1.053122639 1.096440638 1.104613178 0.976888867 0.978126239 1.021089821 0.89739359 1 14.03004037 -6.776473532 24.78121245 0.976231941 1.068111498 0.468152813 0.052696274 213.2501409 351503.8303 0.018359846 0.016255462 1.67E-07 6.776473532 0.091879557 YKDAIHFYNK ddPTM_A459_MK2206_30min_R1 1 YKDAIHFYNK 10 1 P31948-2;P31948-3;P31948 P31948-2 STIP1 Stress-induced-phosphoprotein 1 0 83.883 0.031097 6553700 13227 13242 13197 12869 13726 12928 13055 12400 10982 9498.4 FALSE TRUE 12101.97419 12379.94339 12301.22441 13860.17261 13179.26435 13659.97219 12184.12477 12291.58811 12123.6182 10675.1335 1.13366022 1.159699164 1.152325112 1.298360588 1.234576069 1.279606685 1.141355728 1.151422425 1.135687736 1 13.38196649 -8.634957895 0.947309089 1.002132703 1.205583828 0.558877843 0.053803724 0.571227706 1.092783959 0.056263998 0.018910679 2.32E-09 8.634957895 0.203451125 YKDLDEDELLGNLS(ph)ETELK ddPTM_A459_MK2206_30min_R1 5 YKDLDEDELLGNLSETELK 19 1 Q9NYL9;H0YNU8 Q9NYL9 TMOD3 Tropomodulin-3 1 YKDLDEDELLGNLS(0.785)ET(0.215)ELK;YKDLDEDELLGNLS(0.752)ET(0.248)ELK;YKDLDEDELLGNLS(0.754)ET(0.246)ELK;YKDLDEDELLGNLS(0.758)ET(0.242)ELK;YKDLDEDELLGNLS(0.68)ET(0.32)ELK 173.81 6.43E-10 140773000 38799.9 46285.5 46486.7 37434 30787.9 29320.6 35206.1 36018.9 41011.7 40381.9 TRUE FALSE 35499.76476 43272.30554 43331.31232 40317.17317 29561.55275 30980.70703 32857.56531 35703.99055 45275.01298 45384.71464 0.782196496 0.953455494 0.954755641 0.888342551 0.651354823 0.682624255 0.723978669 0.786696376 0.99758285 1 15.46991887 -6.03199616 24.31673569 0.784532142 0.905648088 0.095844799 0.119811193 813.2310255 618045.5889 0.035908188 0.046408623 9.29E-07 6.03199616 0.121115946 YKDLDEDELLGNLS(ph)ETELK ddPTM_A459_MK2206_30min_R2 6 YKDLDEDELLGNLSETELK 19 1 Q9NYL9;H0YNU8 Q9NYL9 TMOD3 Tropomodulin-3 1 YKDLDEDELLGNLS(0.97)ET(0.03)ELK;YKDLDEDELLGNLS(0.85)ET(0.15)ELK;YKDLDEDELLGNLS(0.928)ET(0.072)ELK;YKDLDEDELLGNLS(0.654)ET(0.346)ELK;YKDLDEDELLGNLS(0.776)ET(0.224)ELK;YKDLDEDELLGNLS(0.936)ET(0.064)ELK 125.31 0.00021536 52854400 357622 386974 406019 389120 375629 239583.9 463987 346382 314565.3 470926 TRUE FALSE 385001.8153 367757.4339 419555.4708 357327.6513 360879.9181 248701.4332 403064.9496 391655.3167 341925.6212 455559.7232 0.845118204 0.807265031 0.920966998 0.784370595 0.792168183 0.545924981 0.884768624 0.859723318 0.75056157 1 18.79728068 -10.91368306 6.707841087 1.00001647 0.799052654 0.277318915 0.097349219 2.47E-05 2.24E-06 0.097120566 0.023553268 1.22E-11 10.91368306 -0.200963816 YKDLDEDELLGNLSET(ph)ELK ddPTM_A459_MK2206_30min_R2 1 YKDLDEDELLGNLSETELK 19 1 Q9NYL9;H0YNU8 Q9NYL9 TMOD3 Tropomodulin-3 1 YKDLDEDELLGNLS(0.292)ET(0.708)ELK 104.23 0.0012837 1913300 20382 19848 20281 19936 21063 13615 25445 20040 15927 25132 TRUE FALSE 21942.46159 18862.37718 20957.15842 18307.16503 20235.96079 14133.12837 22104.04094 22659.29681 17312.30167 24311.9449 0.902538307 0.775848138 0.862010773 0.753011127 0.83234644 0.581324465 0.909184396 0.932023205 0.712090363 1 14.56937769 -10.7454281 5.048961964 1.00002296 0.806672947 0.246672792 0.101336281 2.58E-05 3.98E-06 0.096762787 0.023465638 1.80E-11 10.7454281 -0.193350013 YKPAVNQIECHPYLTQEK ddPTM_A459_MK2206_30min_R2 1 YKPAVNQIECHPYLTQEK 18 1 P15121;E9PCX2 P15121 AKR1B1 Aldose reductase 0 103.67 0.0015939 8660900 33058 40182 37451 47455 36620 34907 38027 36858 29788 39271 FALSE TRUE 35588.9459 38186.62031 38699.59765 43577.7747 35182.1148 36235.41035 33034.00922 41675.46715 32378.9064 37989.59049 0.936807832 1.005186416 1.018689519 1.147097774 0.926098817 0.953824716 0.869554233 1.097023332 0.852309961 1 15.21331654 YKPLNT(ph)TPNATK ddPTM_A459_MK2206_30min_R1 1 YKPLNTTPNATK 12 1 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 YKPLNT(0.687)T(0.305)PNAT(0.008)K 131.32 0.0215 0 2813.2 2519.2 2592.1 2158.7 2346 2169.2 2126.5 2390.1 1986.5 1825.4 TRUE FALSE 2573.922567 2355.199622 2416.155474 2324.963448 2252.553852 2292.018229 1984.645065 2369.203608 2193.003784 2051.544333 1.254626832 1.148013028 1.177725207 1.133274778 1.097979613 1.117216037 0.967390776 1.154839098 1.068952666 1 11.00249462 -1.522878745 0.2167802 1.022843903 2.134873241 0.612052973 0.049742457 36.2040778 0.459050929 0.079043466 14.01813717 0.03 1.522878745 1.112029338 YKPVCNQVECHPYFNQR ddPTM_A459_MK2206_30min_R1 2 YKPVCNQVECHPYFNQR 17 1 P52895;B4DK69;H0Y804;S4R3P0;Q04828 P52895;Q04828 AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 180.56 6.14E-08 197890000 15870.1 17368.2 17099.8 15104.6 16442.6 15348.5 17002.5 14829.8 14091.6 13532.4 FALSE TRUE 14520.26466 16237.52702 15939.11322 16267.95891 15787.65642 16217.51881 15868.29425 14700.14462 15556.47225 15208.89588 0.954721814 1.067633519 1.048012515 1.069634446 1.03805408 1.066317959 1.043356097 0.9665491 1.022853491 1 13.8926278 -7.733701346 23.24095322 0.996026012 1.044340196 0.265769727 0.033697506 113.5411104 95132.91228 0.015306281 0.008833168 1.85E-08 7.733701346 0.048314184 YKPVCNQVECHPYFNQR ddPTM_A459_MK2206_30min_R2 2 YKPVCNQVECHPYFNQR 17 1 P52895;B4DK69;H0Y804;S4R3P0;Q04828 P52895;Q04828 AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 120.21 0.0011752 113724000 230322 285900 277961 345430 274420 293430 296230 283114 276088 293940 FALSE TRUE 247955.6294 271702.6217 287228.081 317207.264 263644.892 304596.6843 257334.6452 320117.9719 300101.6352 284348.7619 0.872012341 0.955525953 1.010126013 1.115557043 0.927188465 1.071208055 0.904996538 1.125793444 1.055399831 1 18.117302 -4.946933468 2.123565765 1.027962884 0.857468937 0.340020178 0.067951433 0.531568847 3.565972771 0.017798012 0.154114445 1.13E-05 4.946933468 -0.170493947 YKPVCNQVECHPYFNR ddPTM_A459_MK2206_30min_R1 2 YKPVCNQVECHPYFNR 16 1 A0A0A0MSS8;P42330;S4R3Z2;P42330-2 A0A0A0MSS8;P42330-2 AKR1C3 Aldo-keto reductase family 1 member C3 0 ; 170.74 7.28E-06 122667000 11960.9 12907.6 12426.1 11002.1 13550.6 12203 13346.3 11894.9 10996.4 10885.9 FALSE TRUE 10943.56265 12067.31289 11582.65095 11849.48365 13010.85091 12893.92331 12455.99268 11790.90414 12139.51513 12234.52748 0.89448184 0.986332567 0.946718292 0.9685281 1.063453487 1.053896306 1.018101656 0.963740052 0.992234081 1 13.57867076 -6.044958949 8.044193078 1.015645447 0.948577078 0.484947014 0.034056002 0.297713995 49.24078731 0.010798844 0.014122549 9.02E-07 6.044958949 -0.067068369 YKPVCNQVECHPYFNR ddPTM_A459_MK2206_30min_R2 2 YKPVCNQVECHPYFNR 16 1 A0A0A0MSS8;P42330;S4R3Z2;P42330-2 A0A0A0MSS8;P42330-2 AKR1C3 Aldo-keto reductase family 1 member C3 0 ; 116.58 0.0015207 60821000 213580 245226 246465 252363 236806 248106 234859 211149 225624 217269 FALSE TRUE 229931.849 233048.4334 254682.0201 231744.1356 227507.8066 257547.8477 204021.7312 238746.8993 245248.3677 210179.5303 1.093978318 1.108806519 1.211735604 1.102600883 1.082445118 1.225370745 0.970702194 1.135918892 1.166851821 1 17.68126264 -7.249039676 24.98789805 1.079694792 1.135472704 0.181725858 0.070150688 1644.296855 3313596.83 0.026760624 0.020558457 5.64E-08 7.249039676 0.055777912 YKPVTNQVECHPYLTQEK ddPTM_A459_MK2206_30min_R1 1 YKPVTNQVECHPYLTQEK 18 1 O60218;C9JRZ8;C9JRZ8-2 O60218 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 76.378 0.011669 49148000 4040.8 3586.9 4850.4 3563.8 4001.2 3851.3 4960.7 4017.9 3691.3 3527.3 FALSE TRUE 3697.108741 3353.392158 4521.168362 3838.284493 3841.823731 4069.357278 4629.780754 3982.771924 4075.023844 3964.288554 0.932603339 0.845900119 1.140474085 0.968215215 0.969107995 1.026503803 1.167871786 1.004662468 1.027933206 1 11.95284626 -6.890001295 4.768714098 1.056278321 0.973879197 0.175353536 0.080702807 0.385611608 14.51114036 0.029907538 0.026308052 1.29E-07 6.890001295 -0.082399124 YLAADKDGNVTCER ddPTM_A459_MK2206_30min_R2 1 YLAADKDGNVTCER 14 1 Q16658 Q16658 FSCN1 Fascin 0 98.368 0.029428 8762500 31161 33727 32362 33861 32873 30084 31041 29267 30553 37353 FALSE TRUE 33546.71012 32052.16622 33440.93293 31094.44798 31582.24085 31228.8677 26965.27941 33092.29739 33210.44471 36134.17467 0.92839287 0.887031917 0.925465525 0.860527417 0.874026905 0.864247433 0.746254195 0.915817165 0.919086848 1 15.14107632 -8.541133201 2.041530745 0.998009422 0.871701678 0.382849817 0.048908549 0.374037664 3.581150917 0.048990477 0.01365186 2.88E-09 8.541133201 -0.126307744 YLAEFATGNDR ddPTM_A459_MK2206_30min_R2 1 YLAEFATGNDR 11 0 P62258;P62258-2;K7EM20 P62258 YWHAE 14-3-3 protein epsilon 0 153.1 0.0078471 9988400 36360 32096 30580 33376 29287 19876 36276 25830 25172 22461 FALSE TRUE 39143.74956 30502.15931 31599.52194 30649.07404 28137.04522 20632.39511 31512.91762 29206.06969 27361.41506 21728.09941 1.801526623 1.403811661 1.454315969 1.410573169 1.294961179 0.949572014 1.450330148 1.34416127 1.259264078 1 14.40727436 -1.522878745 0.494143227 1.22689301 17.43780345 0.55702039 0.152326085 86.62461715 0.935357591 0.08660611 1453.337996 0.03 1.522878745 16.21091044 YLAEFATGNDRK ddPTM_A459_MK2206_30min_R1 2 YLAEFATGNDRK 12 1 P62258;P62258-2;K7EM20 P62258 YWHAE 14-3-3 protein epsilon 0 ; 117.86 0.0063094 31228000 14325.3 6932.1 8091.2 10577.1 11689.5 14685 11910.1 10201.2 6603.8 5945.7 FALSE TRUE 13106.85801 6480.81903 7541.991887 11391.75007 11223.88246 15516.45201 11115.59896 10112.01198 7290.288642 6682.298204 1.961429677 0.96984882 1.128652397 1.704765296 1.679644057 2.322023282 1.663439527 1.513253626 1.09098523 1 12.70612865 -5.774241657 24.98089132 1.629195591 1.314964126 0.035978488 0.419544184 528.516528 1031285.511 0.12028721 0.179714126 1.68E-06 5.774241657 -0.314231465 YLAEVAAGDDKK ddPTM_A459_MK2206_30min_R1 1 YLAEVAAGDDKK 12 1 E7EX29;P63104;B0AZS6;B7Z2E6;H0YB80;P63104-2 E7EX29;P63104-2 YWHAZ 14-3-3 protein zeta/delta 0 148.78 0.00080313 24773000 2203.9 2800.8 2809.6 2881.5 2034.6 2015.4 2226.9 2356.3 2135.1 2344.5 FALSE TRUE 2016.446732 2618.467411 2618.89218 3103.433629 1953.557574 2129.510206 2078.347564 2335.699118 2357.051286 2634.95436 0.765268182 0.993742985 0.99390419 1.177794074 0.741400915 0.808177264 0.788760366 0.886428681 0.894532111 1 11.36356226 -6.288564341 24.99305562 0.842063227 0.984269762 0.233742201 0.113746919 1024.642359 944106.9316 0.035582592 0.040356325 5.15E-07 6.288564341 0.142206535 YLAEVAAGDDKK ddPTM_A459_MK2206_30min_R2 2 YLAEVAAGDDKK 12 1 E7EX29;P63104;B0AZS6;B7Z2E6;H0YB80;P63104-2 E7EX29;P63104-2 YWHAZ 14-3-3 protein zeta/delta 0 ; 135.1 0.0020544 23806000 144733 158600 166220 153674 166325 108215 180735 139081 145975 177475 FALSE TRUE 155813.8698 150724.1546 171761.6918 141118.3426 159794.2448 112333.1977 157004.2774 157259.3642 158671.6416 171684.0053 0.907561945 0.877916113 1.000452497 0.821965578 0.930746254 0.654302056 0.914495658 0.915981451 0.924207479 1 17.38939611 -8.438798526 1.418470112 0.995733779 0.871892607 0.170195591 0.085848182 0.754915316 3.279961275 0.0825421 0.024895373 3.64E-09 8.438798526 -0.123841172 YLAEVACGDDR ddPTM_A459_MK2206_30min_R2 3 YLAEVACGDDR 11 0 P27348;E9PG15 P27348 YWHAQ 14-3-3 protein theta 0 ;; 183.72 0.0004047 39281700 60310.3 94054 76307.6 90073 96264.7 91539.4 98952.2 72686.6 81665.9 81000.8 FALSE TRUE 64927.70294 89383.41513 78851.6573 82713.74777 92484.86419 95022.99601 85959.65728 82186.98819 88769.05236 78357.75053 0.828606009 1.140709305 1.006303228 1.055591147 1.180289934 1.21268152 1.097015377 1.048868652 1.13286882 1 16.25778836 -4.756299252 24.99888609 1.100741688 0.828605587 0.588512993 0.06730439 119.0478712 578922.1026 0.01748093 0.1434223 1.75E-05 4.756299252 -0.272136102 YLCEGTES(ph)PYQTGQLHPAIR ddPTM_A459_MK2206_30min_R1 2 YLCEGTESPYQTGQLHPAIR 20 0 H0Y6V4;A0A0G2JQF6;H0Y6P5;Q5TG12;E9PGC5;Q15262;Q15262-2;Q15262-3;Q15262-4 H0Y6V4 PTPRK Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase kappa 1 Y(0.004)LCEGT(0.008)ES(0.954)PY(0.026)QT(0.007)GQLHPAIR;YLCEGT(0.005)ES(0.994)PY(0.001)QTGQLHPAIR 118.05 0.00017214 16299500 2639.3 2512.9 2359 1993.36 2520.9 2578.3 2757.9 3303.9 2885.2 2676.1 TRUE FALSE 2414.813675 2349.309753 2198.877653 2146.888933 2420.487215 2724.281118 2573.925523 3275.014351 3185.126865 3007.635472 0.802894399 0.78111519 0.731098457 0.713812878 0.804780778 0.905788332 0.855797036 1.088900028 1.059013599 1 11.55441401 -7.320825155 1.15488504 1.057489897 0.759947647 0.83374308 0.051927162 0.187521933 0.481616195 0.037034578 0.020060332 4.78E-08 7.320825155 -0.29754225 YLCIPAADS(ph)PSQNLTR ddPTM_A459_MK2206_30min_R1 1 YLCIPAADSPSQNLTR 16 0 S4R3A4;Q9NRW4;Q9NRW4-2 S4R3A4 DUSP22 Dual specificity protein phosphatase 22 1 YLCIPAADS(0.588)PS(0.236)QNLT(0.176)R 97.073 0.0078181 2924700 1146.6 1141.4 1025.5 916.54 1199.5 1025.8 1104.2 822.07 980.76 870.05 TRUE FALSE 1049.075649 1067.094653 955.8919172 987.1320696 1151.721375 1083.87991 1030.540833 814.8827287 1082.713512 977.8383625 1.072851802 1.091279186 0.977556162 1.009504339 1.177823881 1.108444863 1.053896914 0.833351155 1.10725203 1 9.933452196 -7.549219156 24.9947955 0.970905724 1.072120305 0.210193419 0.080050924 319.0930912 302787.9989 0.037346989 0.02156297 2.82E-08 7.549219156 0.101214581 YLDEDTIYHLQPSGR ddPTM_A459_MK2206_30min_R1 2 YLDEDTIYHLQPSGR 15 0 P31153;P31153-2 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 0 ; 155.06 0.00024736 27818000 6915.1 6912.5 7659.5 6148.5 8212.8 8274 7885.1 7560.9 6478.3 5973.1 FALSE TRUE 6326.934432 6462.494994 7139.594481 6622.058535 7885.666785 8742.46673 7359.099366 7494.795848 7151.742468 6713.092723 0.942476842 0.962670301 1.063532827 0.986439307 1.174669725 1.302300905 1.096230854 1.11644456 1.065342423 1 12.71276185 -6.25412408 24.50089732 1.138997087 0.992254342 0.409288793 0.079681175 432.1221532 1447290.747 0.024646628 0.03114377 5.57E-07 6.25412408 -0.146742744 YLDEDTIYHLQPSGR ddPTM_A459_MK2206_30min_R2 4 YLDEDTIYHLQPSGR 15 0 P31153;P31153-2 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 0 ;;; 202.92 1.57E-05 28768900 100456 138225 114508 147849 127832 149651 139359 106974 120498 119996 FALSE TRUE 108146.9886 131360.9475 118325.6396 135769.2638 122812.6734 155346.0737 121060.9959 120955.8691 130978.6982 116080.5403 0.931654766 1.131636251 1.019340875 1.16961261 1.057995363 1.338261118 1.042905172 1.041999535 1.128343285 1 16.82476661 -4.756768616 24.90794949 1.10813742 0.931654486 0.229407987 0.094031279 202.6976252 1080796.497 0.022828668 0.179579207 1.75E-05 4.756768616 -0.176482935 YLEES(ph)DEDDLF ddPTM_A459_MK2206_30min_R1 4 YLEESDEDDLF 11 0 P11388;P11388-2;P11388-3;P11388-4;J3QR57 P11388 TOP2A DNA topoisomerase 2-alpha 1 YLEES(1)DEDDLF;YLEES(1)DEDDLF;YLEES(1)DEDDLF;YLEES(1)DEDDLF 185.14 2.12E-05 28395800 11109.45 11766.26 10589.69 10936.25 10867.1 11022.93 10397.13 9447.47 9046.17 8475.15 TRUE FALSE 10164.53294 11000.27434 9870.891347 11778.56187 10434.2404 11647.03877 9703.556428 9364.871766 9986.551744 9525.115566 1.067129618 1.154870433 1.036301479 1.236579419 1.095445018 1.222771387 1.018733721 0.983176708 1.048444155 1 13.21752088 -7.377971927 8.267951824 1.009907257 1.134540129 0.497546034 0.060539069 0.247645904 16.12519342 0.024141386 0.016227464 4.19E-08 7.377971927 0.124632871 YLEES(ph)DEDDLF ddPTM_A459_MK2206_30min_R2 2 YLEESDEDDLF 11 0 P11388;P11388-2;P11388-3;P11388-4;J3QR57 P11388 TOP2A DNA topoisomerase 2-alpha 1 YLEES(1)DEDDLF;YLEES(1)DEDDLF 156.48 0.00054781 2137890 10109.45 10517 8995 11474.9 9305.86 10492.52 14825.9 7788.5 8698.51 9076.15 TRUE FALSE 10883.43726 9994.741073 9294.888811 10537.36396 8940.465178 10891.8202 12879.24152 8806.483692 9455.090676 8779.995969 1.239572012 1.13835372 1.058643859 1.2001559 1.018276684 1.240526788 1.466884674 1.003016826 1.076890093 1 13.10000456 YLGDAFGSPQT(ph)DHGFETDPDPFLLDEPAPR ddPTM_A459_MK2206_30min_R1 1 YLGDAFGSPQTDHGFETDPDPFLLDEPAPR 30 0 Q9H8N7 Q9H8N7 ZNF395 Zinc finger protein 395 1 Y(0.002)LGDAFGS(0.198)PQT(0.799)DHGFET(0.001)DPDPFLLDEPAPR 103.12 2.06E-08 3596700 262 340.44 341.97 206.28 238.6 284.61 159.18 505.58 337.99 250.5 TRUE FALSE 239.7155242 318.2772941 318.7580292 222.1677213 229.0960568 300.7243722 148.5613926 501.1597674 373.12527 281.5338312 0.851462587 1.130511714 1.132219271 0.7891333 0.813742547 1.068164245 0.527685756 1.780104953 1.325330133 1 8.137164487 -7.763185225 24.99999999 1.414538076 0.918174222 0.423472768 0.247250592 41.13732766 589038.7657 0.122593481 0.063694615 1.73E-08 7.763185225 -0.496363853 YLGPS(ph)NSQVDFLLR ddPTM_A459_MK2206_30min_R1 1 YLGPSNSQVDFLLR 14 0 H7BYZ6 H7BYZ6 GPR75-ASB3 1 YLGPS(0.679)NS(0.321)QVDFLLR 90.15 0.018613 171920000 9658.1 3234.2 4381.1 7698.2 5234.9 8401.4 5399.8 4170.9 2719.3 2538.3 TRUE FALSE 8836.627878 3023.652992 4083.723138 8291.116698 5026.382848 8877.080008 5039.589194 4134.434261 3001.980966 2852.763767 3.097567342 1.059903041 1.431497128 2.906345346 1.761934481 3.11174732 1.766563798 1.449273266 1.052306188 1 11.47814457 -7.801047545 2.501332291 1.082064678 2.160160838 0.344057135 0.657765286 0.362394045 4.502242088 0.44177579 0.186839281 1.58E-08 7.801047545 1.078096159 YLGPSNS(ph)QVDFLLR ddPTM_A459_MK2206_30min_R2 1 YLGPSNSQVDFLLR 14 0 H7BYZ6 H7BYZ6 GPR75-ASB3 1 YLGPS(0.011)NS(0.989)QVDFLLR 82.831 0.029039 57654000 48961 63810 40921 43605 54392 48407 37023 41055 32922 16860 TRUE FALSE 52709.4918 60641.28819 42285.28572 40042.33201 52256.29678 50249.16231 32161.83563 46421.02946 35785.49605 16309.85958 3.231756322 3.718075431 2.592621077 2.45509974 3.203969754 3.080907108 1.971925967 2.846194306 2.194102032 1 13.99345674 -9.682477689 0.192668098 4.76E-15 3.561422565 0.703183495 0.401737588 6.871326328 0.443780015 6.12990397 1.596086837 2.08E-10 9.682477689 3.561422565 YLGS(ph)PITTVPK ddPTM_A459_MK2206_30min_R1 2 YLGSPITTVPK 11 0 D6RJC2;P30307-4;P30307-3;P30307-2;P30307;A0A3B3IT42 D6RJC2 CDC25C M-phase inducer phosphatase 3 1 YLGS(0.999)PIT(0.001)TVPK;YLGS(0.919)PIT(0.081)TVPK 128.85 0.0026981 36338000 13745.8 14206.8 14350.4 11175.7 11985.2 11488.1 11994.9 10983.9 9846.6 9826.6 TRUE FALSE 12576.64753 13281.93474 13376.33483 12036.45435 11507.8041 12138.54629 11194.74211 10887.86892 10870.18931 11043.9934 1.138777169 1.20263878 1.211186421 1.08986432 1.041996649 1.099108435 1.013649837 0.985863404 0.984262569 1 13.43097431 -6.393806413 0.740296942 0.989179373 1.196282111 0.814972247 0.03503392 0.306832733 0.370685105 0.023083821 0.034754398 4.04E-07 6.393806413 0.207102737 YLGS(ph)PITTVPK ddPTM_A459_MK2206_30min_R2 2 YLGSPITTVPK 11 0 D6RJC2;P30307-4;P30307-3;P30307-2;P30307;A0A3B3IT42 D6RJC2 CDC25C M-phase inducer phosphatase 3 1 YLGS(0.997)PIT(0.003)TVPK;YLGS(0.999)PIT(0.001)TVPK 147.26 0.00066967 25883000 151294 160908 130607 156165 145711 127949 140040 110224 106145 133432 TRUE FALSE 162877.185 152917.5427 134961.3722 143405.82 139989.654 132818.1889 121652.5798 124630.6553 115377.3002 129078.1248 1.261849638 1.184689838 1.045578966 1.111000181 1.084534302 1.028975197 0.942472475 0.965544359 0.89385634 1 16.977885 -4.125636066 0.33933467 0.934344966 1.671379914 0.823059079 0.044900293 4.404603911 0.289014133 0.045222742 1.450092724 7.49E-05 4.125636066 0.737034948 YLHDESGLNR ddPTM_A459_MK2206_30min_R1 1 YLHDESGLNR 10 0 B5MCX3;Q15019;Q15019-3;Q15019-2;C9J2Q4;C9IY94;C9J938;H7C310;C9JB25 B5MCX3 Sep-02 Septin-2 0 125.97 0.004968 3436600 1678.8 1301.6 1405.1 1169.7 1703.9 1399 1624.7 1206.8 1717 1749.8 FALSE TRUE 1536.009244 1216.865603 1309.725727 1259.790497 1636.030055 1478.210171 1516.319227 1196.249075 1895.488294 1966.578434 0.781056691 0.618772983 0.665992113 0.640600179 0.831917012 0.751666013 0.771044369 0.608289532 0.963850849 1 10.94147201 -8.328263297 6.994237579 0.988441279 0.709774353 0.699370802 0.071679552 0.161461106 14.18277466 0.070174784 0.018289281 4.70E-09 8.328263297 -0.278666926 YLHDESGLNRR ddPTM_A459_MK2206_30min_R1 4 YLHDESGLNRR 11 1 B5MCX3;Q15019;Q15019-3;Q15019-2;C9J2Q4;C9IY94;C9J938;H7C310;C9JB25 B5MCX3 Sep-02 Septin-2 0 ;;; 146.11 0.0004656 31757100 8490.1 7703.6 8695.5 7775 10942.6 9233.7 9912.2 10508.7 6123.16 5836.11 FALSE TRUE 7767.972412 7202.09424 8105.273687 8373.831847 10506.73307 9756.504114 9250.975224 10416.82354 6759.684394 6559.131367 1.184298953 1.098025613 1.23572364 1.276667805 1.601848245 1.48746893 1.410396393 1.58814071 1.030576156 1 12.67928905 -5.796977706 2.66648169 1.393382018 1.15209786 0.121818861 0.197052528 0.41586658 6.026246217 0.056023033 0.09789101 1.60E-06 5.796977706 -0.241284158 YLHDESGLNRR ddPTM_A459_MK2206_30min_R2 2 YLHDESGLNRR 11 1 B5MCX3;Q15019;Q15019-3;Q15019-2;C9J2Q4;C9IY94;C9J938;H7C310;C9JB25 B5MCX3 Sep-02 Septin-2 0 ; 95.775 0.014096 14451200 12185.6 20529.7 17945.4 23521 19852.4 18545.8 20220.2 21663.3 22038.5 16660 FALSE TRUE 13118.53891 19510.22495 18543.69068 21599.25906 19072.89503 19251.57341 17565.26345 24494.76769 23955.36889 16116.38556 0.813987656 1.210583159 1.15061101 1.34020491 1.183447427 1.19453418 1.08990092 1.519867317 1.486398349 1 13.97624061 -4.348581135 1.533410966 1.261547314 1.60E-16 0.399778444 0.156483616 3.823837805 3.466661454 0.044860305 10.11116072 4.48E-05 4.348581135 -1.261547314 YLLGDAPVS(ph)PSSQK ddPTM_A459_MK2206_30min_R1 3 YLLGDAPVSPSSQK 14 0 Q9NYB0;A0A590UJT3;H3BMI8 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 Y(0.017)LLGDAPVS(0.886)PS(0.094)S(0.003)QK;YLLGDAPVS(0.91)PS(0.089)S(0.002)QK;YLLGDAPVS(0.815)PS(0.183)S(0.002)QK 235.71 2.01E-14 323260000 26434.8 26694.6 28161.2 23635.6 26306.7 23908.5 26055.2 24215.4 23575.8 20775.1 TRUE FALSE 24186.38145 24956.77669 26249.69621 25456.01801 25258.84843 25262.17861 24317.10515 24003.68731 26026.58878 23348.87623 1.035869187 1.068864147 1.124238098 1.090245961 1.081801462 1.081944088 1.041467902 1.028044651 1.114682716 1 14.5110655 -7.253077884 23.014431 1.048385872 1.0824563 0.19788033 0.033705018 359.7820495 990276.4475 0.013003534 0.009864969 5.58E-08 7.253077884 0.034070429 YLLGDAPVS(ph)PSSQK ddPTM_A459_MK2206_30min_R2 3 YLLGDAPVSPSSQK 14 0 Q9NYB0;A0A590UJT3;H3BMI8 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 YLLGDAPVS(0.955)PS(0.045)SQK;Y(0.042)LLGDAPVS(0.818)PS(0.126)S(0.015)QK;Y(0.106)LLGDAPVS(0.856)PS(0.029)S(0.009)QK 236.03 6.11E-15 286755500 718076 823222 723458 808046 817743 727906 912948 697499 658105 781867 TRUE FALSE 773052.4507 782341.9926 747577.7286 742026.057 785634.301 755606.9729 793076.831 788664.5142 715345.7833 756354.7438 1.022076555 1.034358545 0.988395637 0.9810556 1.038711408 0.999011349 1.048551407 1.042717747 0.945780785 1 19.52870352 -5.229488163 24.83774897 1.008668542 1.028217554 0.076237108 0.030041188 1891.745593 1470567.471 0.007662111 0.02026926 5.90E-06 5.229488163 0.019549012 YLLSQS(ph)SPAPLTAAEEELR ddPTM_A459_MK2206_30min_R1 3 YLLSQSSPAPLTAAEEELR 19 0 F8VS81;Q12792;Q12792-3;Q12792-4 F8VS81 TWF1 Twinfilin-1 1 YLLSQS(0.5)S(0.5)PAPLTAAEEELR;YLLSQS(0.578)S(0.422)PAPLTAAEEELR;YLLSQS(0.5)S(0.5)PAPLTAAEEELR 278.4 1.60E-71 39700900 13201.8 12828.2 11794.3 10360.2 12104.6 9956.4 11486.2 11093.1 8134 8409.5 TRUE FALSE 12078.91758 11993.08185 10993.73578 11158.1444 11622.44815 10520.12276 10719.97656 10996.1142 8979.558408 9451.332348 1.278012151 1.268930285 1.163194285 1.180589571 1.229715316 1.113083571 1.134229139 1.163445934 0.950083869 1 13.206302 -7.293980102 0.338574777 0.971283749 1.287955285 0.726743215 0.05285093 0.842489608 0.251760248 0.069675752 0.095470525 5.08E-08 7.293980102 0.316671537 YLLSQS(ph)SPAPLTAAEEELR ddPTM_A459_MK2206_30min_R2 4 YLLSQSSPAPLTAAEEELR 19 0 F8VS81;Q12792;Q12792-3;Q12792-4 F8VS81 TWF1 Twinfilin-1 1 YLLSQS(0.701)S(0.299)PAPLTAAEEELR;YLLS(0.083)QS(0.458)S(0.458)PAPLT(0.001)AAEEELR;YLLS(0.002)QS(0.467)S(0.467)PAPLT(0.065)AAEEELR;YLLSQS(0.924)S(0.076)PAPLTAAEEELR 243.01 4.47E-30 17485000 91595 99009 83551 101201 91016 100798 97708 72738.4 86307 90749 TRUE FALSE 98607.58362 94092.35703 86336.54864 92932.55457 87442.25452 104633.9385 84878.82223 82245.55863 93813.82685 87787.86756 1.123248421 1.071815043 0.983467887 1.058603622 0.996063089 1.191895206 0.966862786 0.936867029 1.068642279 1 16.42173395 -4.967859174 4.050693134 1.026874976 1.118469531 0.173653403 0.067349867 0.387538211 13.91311351 0.01732986 0.077731802 1.08E-05 4.967859174 0.091594555 YLLSQSS(ph)PAPLTAAEEELR ddPTM_A459_MK2206_30min_R1 1 YLLSQSSPAPLTAAEEELR 19 0 F8VS81;Q12792;Q12792-3;Q12792-4 F8VS81 TWF1 Twinfilin-1 1 YLLSQS(0.032)S(0.968)PAPLTAAEEELR 255.69 1.30E-38 5133400 772.11 600.3 763.81 664.33 791.11 533.25 659.89 877.53 685.57 440.03 TRUE FALSE 706.43799 561.2203609 711.9647053 715.4968117 759.5984135 563.4421542 615.8699421 869.8578477 756.8374548 494.5442385 1.428462684 1.134823373 1.439638054 1.446780199 1.535956451 1.139315981 1.245328313 1.758908061 1.530373617 1 8.94995577 YLLSQSS(ph)PAPLTAAEEELR ddPTM_A459_MK2206_30min_R2 1 YLLSQSSPAPLTAAEEELR 19 0 F8VS81;Q12792;Q12792-3;Q12792-4 F8VS81 TWF1 Twinfilin-1 1 YLLSQS(0.19)S(0.809)PAPLT(0.001)AAEEELR 211.06 1.31E-16 9611300 50716 51309 45336 60948 49997 49759 48988 36018 41645 48787 TRUE FALSE 54598.85595 48761.06967 46847.47961 55968.35344 48033.86657 51652.61361 42555.81675 40725.67627 45267.20682 47195.08419 1.15687591 1.033181114 0.992634729 1.185893709 1.017772664 1.09444902 0.901700198 0.862921996 0.959150886 1 15.52634898 -7.261580034 24.99999934 0.919520097 1.075995624 0.552852336 0.065345453 9.219116933 1638379.54 0.025484518 0.018429163 5.48E-08 7.261580034 0.156475527 YLMDEGAHLHIYDPK ddPTM_A459_MK2206_30min_R1 2 YLMDEGAHLHIYDPK 15 0 O60701;O60701-2;O60701-3 O60701 UGDH UDP-glucose 6-dehydrogenase 0 ; 124.51 0.00074264 24639000 15815 17111.1 19700.5 16017.2 17476.6 14365.6 18558.3 18180.6 17337.1 15935.8 FALSE TRUE 14469.8512 15997.16428 18363.28495 17250.84752 16780.47001 15178.96786 17320.30967 18021.64893 19139.35359 17910.04721 0.807918094 0.893194981 1.02530634 0.963193861 0.936930529 0.847511326 0.967072251 1.006231235 1.068637808 1 14.12848152 -7.682260342 2.965330158 1.032040859 0.91948149 0.418570943 0.059032987 0.284180455 5.002168575 0.035987223 0.017807114 2.08E-08 7.682260342 -0.112559369 YLMEEDEDAYKK ddPTM_A459_MK2206_30min_R1 2 YLMEEDEDAYKK 12 1 A0A2R8Y6J3;P46777 A0A2R8Y6J3 RPL5 60S ribosomal protein L5 0 ; 122.33 0.0048294 23294000 4641.3 5154.5 5312.6 4863 5546.8 5170 5518.3 5036.6 4158.2 3953.9 FALSE TRUE 4246.533063 4818.941113 4951.995514 5237.549103 5325.85921 5462.720932 5150.184276 4992.565537 4590.45977 4443.738982 0.955621624 1.084433882 1.114375874 1.178635632 1.19850856 1.229307336 1.158975425 1.123505579 1.033017418 1 12.11755836 -4.695386602 1.654120017 1.143708476 0.859580534 0.364382239 0.067572284 1.276699018 2.911119225 0.019160833 0.623494425 2.02E-05 4.695386602 -0.284127942 YLMEEDEDAYKK ddPTM_A459_MK2206_30min_R2 2 YLMEEDEDAYKK 12 1 A0A2R8Y6J3;P46777 A0A2R8Y6J3 RPL5 60S ribosomal protein L5 0 ; 88.596 0.036439 22344000 87210 105605 105426 87603 96834 69456 106126 73069 68135 93276 FALSE TRUE 93886.86465 100360.8093 108940.8502 80445.55467 93031.81061 72099.19675 92191.52872 82619.36918 74061.25914 90232.41176 1.040500446 1.112247886 1.207336123 0.891537233 1.031024316 0.799038786 1.021711898 0.915628515 0.820783327 1 16.46135813 -5.771443004 24.99607953 0.925273969 1.119250132 0.537830852 0.082560245 145.248037 362931.7674 0.022488711 0.03380119 1.69E-06 5.771443004 0.193976162 YLPHSAGR ddPTM_A459_MK2206_30min_R1 2 YLPHSAGR 8 0 M0R0F0;M0R0R2;P46782 M0R0F0 RPS5 "40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed" 0 ; 152.47 0.0014 38563000 11209.2 11642.9 11683.5 9571 11288.9 10611.1 11454.2 10480 7151 8634.7 FALSE TRUE 10255.79868 10884.94509 10890.45657 10308.16008 10839.23921 11211.89131 10690.11122 10388.37446 7894.37204 9704.431825 1.056815985 1.12164682 1.122214754 1.062211602 1.116937025 1.155337223 1.101570026 1.07047735 0.813481117 1 13.24442803 -8.118048295 5.714002502 0.909285834 1.10584967 0.709836003 0.050007387 0.110185481 4.647636955 0.032696635 0.012002664 7.62E-09 8.118048295 0.196563835 YLPHSAGR ddPTM_A459_MK2206_30min_R2 4 YLPHSAGR 8 0 M0R0F0;M0R0R2;P46782 M0R0F0 RPS5 "40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed" 0 ;;; 166.78 0.00034534 52353000 122326 161671 142636 185447 168658 179735 174441 136270 142510 150812 FALSE TRUE 131691.3726 153642.6532 147391.413 170295.3869 162035.6395 186574.9414 151536.6872 154080.9569 154905.2622 145891.0168 0.90266951 1.053133062 1.010284364 1.167278086 1.110662212 1.278865179 1.038697862 1.056137384 1.061787529 1 17.15453153 -4.435458405 1.14489017 1.104683692 0.660237955 0.343667945 0.077996443 3.606181936 2.344433874 0.024443059 2.326595094 3.67E-05 4.435458405 -0.444445737 YLQAHTQSVYNYHLS(ph)PR ddPTM_A459_MK2206_30min_R1 2 YLQAHTQSVYNYHLSPR 17 0 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 YLQAHTQSVYNYHLS(1)PR;YLQAHTQSVYNYHLS(1)PR 283.22 5.86E-64 38556900 6669.1 5428.3 6246.2 5094 7946.1 7535.6 7596.5 6530.4 4354.6 4184.3 TRUE FALSE 6101.858024 5074.916683 5822.225347 5486.340763 7629.590011 7962.25916 7089.751346 6473.305401 4807.276253 4702.682674 1.29752706 1.079153546 1.238064686 1.166640648 1.622390993 1.693131285 1.507597224 1.376513333 1.022241258 1 12.19926827 -6.218063946 24.53571887 1.412143329 1.190098183 0.115345894 0.219573625 675.906671 382332.2345 0.066825653 0.086270991 6.05E-07 6.218063946 -0.222045147 YLQAHTQSVYNYHLS(ph)PR ddPTM_A459_MK2206_30min_R2 2 YLQAHTQSVYNYHLSPR 17 0 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 YLQAHTQSVYNYHLS(1)PR;YLQAHTQSVYNYHLS(1)PR 158.53 2.36E-05 24046000 51060 69180 64297 71367 83131 88742 85755 63198 78531 59213 TRUE FALSE 54969.19286 65744.6218 66440.62989 65536.08781 79866.85924 92119.13899 74495.26549 71458.19559 85361.48443 57280.88466 0.959642875 1.147758492 1.159909284 1.144117941 1.394302126 1.608200354 1.30052575 1.247505097 1.490226363 1 15.80576615 -6.185510093 4.481552572 1.363853438 1.104293721 0.34410509 0.159064931 0.245799637 9.276770635 0.047134205 0.06123258 6.52E-07 6.185510093 -0.259559717 YLS(ph)FTPPEK ddPTM_A459_MK2206_30min_R1 2 YLSFTPPEK 9 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 YLS(0.961)FT(0.039)PPEK;YLS(0.958)FT(0.042)PPEK 178.54 0.00085917 608930000 24096 25183 24160 18652.5 21561.3 20654 26676 20722.1 27250 31449 TRUE FALSE 22046.50867 23543.58212 22520.08651 20089.11878 20702.46776 21823.41163 24896.49271 20540.92886 30082.73502 35345.13955 0.623749374 0.666105225 0.637148044 0.568370051 0.585723187 0.617437416 0.704382357 0.581152858 0.851113771 1 15.10922422 -8.455241306 3.198419392 0.998381646 0.624363429 0.906712885 0.040100719 0.06226837 1.307715764 0.040008582 0.010658902 3.51E-09 8.455241306 -0.374018217 YLS(ph)FTPPEK ddPTM_A459_MK2206_30min_R2 4 YLSFTPPEK 9 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 Y(0.001)LS(0.963)FT(0.036)PPEK;Y(0.002)LS(0.97)FT(0.028)PPEK;Y(0.013)LS(0.576)FT(0.41)PPEK;Y(0.032)LS(0.671)FT(0.297)PPEK 138.25 0.0024831 517403000 745480 677020 684360 706070 647400 561310 748560 596030 466434 702180 TRUE FALSE 802554.522 643400.1713 707176.2208 648381.8224 621979.8231 582671.0454 650273.1728 673933.1675 507003.5862 679267.9241 1.181499219 0.947196457 1.041085845 0.95453031 0.915661996 0.857792669 0.957314706 0.992146315 0.746397067 1 19.3736212 -1.522878746 0.64859952 0.91369725 22.16839644 0.478852799 0.077920839 191.6341536 1.24358522 0.031592453 5846.538783 0.03 1.522878746 21.25469919 YLS(ph)FTPPEKDGFPS(ph)GTPALNAK ddPTM_A459_MK2206_30min_R1 1 YLSFTPPEKDGFPSGTPALNAK 22 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 2 Y(0.002)LS(0.936)FT(0.063)PPEKDGFPS(0.663)GT(0.336)PALNAK 68.153 0.022397 0 2208.5 2908.6 3699.2 3111 3051.8 2647.1 2523.1 3172.6 2672 1970.8 TRUE FALSE 2020.655478 2719.249611 3448.108611 3350.609759 2930.240344 2796.976514 2354.788603 3144.862293 2949.763962 2214.957583 0.912277279 1.227675705 1.556737988 1.512719605 1.322932939 1.262767529 1.063130338 1.419829579 1.331747382 1 11.11306336 -6.852683566 4.705178399 1.229503964 1.327324982 0.044227647 0.19913226 0.827330183 31.82719169 0.076160843 0.067491207 1.40E-07 6.852683566 0.097821017 YLS(ph)FTPPEKDGFPSGTPALNAK ddPTM_A459_MK2206_30min_R1 2 YLSFTPPEKDGFPSGTPALNAK 22 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 Y(0.004)LS(0.984)FT(0.012)PPEKDGFPSGTPALNAK;Y(0.001)LS(0.775)FT(0.222)PPEKDGFPS(0.001)GT(0.001)PALNAK 110.53 2.63E-05 1454300000 12618.9 14372.1 13836.2 13089.3 14161.6 11782.2 12270.3 13290.2 10273.9 9199.7 TRUE FALSE 11545.59629 13436.47368 12897.03729 14097.44015 13597.51348 12449.29798 11451.77068 13174.00518 11341.90867 10339.42829 1.116657127 1.299537392 1.247364645 1.363464184 1.315112703 1.204060576 1.107582581 1.274152188 1.096957042 1 13.33586879 -8.492909785 0.637069018 0.998134067 1.266320875 0.505618675 0.078195489 0.697902687 0.661276882 0.081628055 0.034421111 3.21E-09 8.492909785 0.268186809 YLS(ph)FTPPEKDGFPSGTPALNAK ddPTM_A459_MK2206_30min_R2 1 YLSFTPPEKDGFPSGTPALNAK 22 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 Y(0.023)LS(0.794)FT(0.182)PPEKDGFPSGTPALNAK 82.475 0.00038963 4446500 32160 47853 38685 45465 53752 42116 50735 33832 43867 42352 TRUE FALSE 34622.19433 45476.6896 39974.73859 41750.36406 51641.4264 43718.75389 44073.43356 38253.95856 47682.47237 40970.05771 0.845060912 1.109998183 0.975706182 1.019045771 1.260467504 1.067090366 1.075747412 0.933705264 1.163837081 1 15.3222823 -4.754649108 24.99831763 1.067142372 0.845060533 0.352556412 0.090345214 271.6653928 1000044.23 0.02246086 0.214474628 1.76E-05 4.754649108 -0.222081839 YLSDSCS(ph)PR ddPTM_A459_MK2206_30min_R1 1 YLSDSCSPR 9 0 P83436 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 1 YLSDS(0.002)CS(0.998)PR 102.95 0.01233 0 3058.9 3496 3441 3055.3 3831.8 3321.4 3842.8 2888.7 2679.2 2519.7 TRUE FALSE 2798.724492 3268.409765 3207.434507 3290.619735 3679.171292 3509.454798 3586.453824 2863.4444 2957.712428 2831.859459 0.988299219 1.154156769 1.13262489 1.161999663 1.29920688 1.239275765 1.266466036 1.011153428 1.044441813 1 11.46753395 -7.779188905 24.99377838 1.020848108 1.181282754 0.443704466 0.081442423 252.0050814 354852.816 0.047782186 0.023030478 1.66E-08 7.779188905 0.160434645 YLSDSCS(ph)PR ddPTM_A459_MK2206_30min_R2 1 YLSDSCSPR 9 0 P83436 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 1 YLSDS(0.002)CS(0.998)PR 91.701 0.02687 8412400 48583 61112 60431 67262 61799 60772 59791 52956 54053 47023 TRUE FALSE 52302.55183 58077.26695 62445.73938 61766.47944 59372.46074 63084.72104 51940.36988 59877.53103 58754.43223 45488.64336 1.149793618 1.27674212 1.372776473 1.357843956 1.305215024 1.386823532 1.141831588 1.316318241 1.291628589 1 15.47321879 -10.14379324 8.054898627 0.999989792 1.29277854 0.540528111 0.079796354 0 0 0.07819814 0.018965835 7.18E-11 10.14379324 0.292788748 YLSFT(ph)PPEKDGFPSGTPALNAK ddPTM_A459_MK2206_30min_R2 2 YLSFTPPEKDGFPSGTPALNAK 22 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 Y(0.046)LS(0.25)FT(0.683)PPEKDGFPS(0.011)GT(0.011)PALNAK;YLS(0.147)FT(0.852)PPEKDGFPSGTPALNAK 95.429 0.00029849 774610000 84078 190968 140189 152813 170109 140741 150434 111853 113980 142083 TRUE FALSE 90515.07633 181484.8068 144862.8313 140327.6891 163429.6659 146096.9974 130681.8351 126472.5711 123893.7744 137446.8433 0.658546054 1.320399963 1.053955317 1.020959708 1.189039064 1.062934541 0.950780912 0.920156244 0.901394105 1 17.06851425 -7.282967527 4.770653776 0.934567215 1.068718381 0.092759889 0.159440259 0.406924793 25.43484679 0.063901774 0.044187434 5.21E-08 7.282967527 0.134151166 YLSPGWGS(ph)ASEEEPSR ddPTM_A459_MK2206_30min_R1 4 YLSPGWGSASEEEPSR 16 0 Q9BRS8;H0YMC6;Q9BRS8-2 Q9BRS8 LARP6 La-related protein 6 1 YLS(0.009)PGWGS(0.988)AS(0.003)EEEPSR;YLSPGWGS(0.921)AS(0.079)EEEPSR;YLSPGWGS(0.896)AS(0.104)EEEPSR;YLSPGWGS(0.997)AS(0.003)EEEPSR 232.26 1.90E-15 41491100 6968.7 6846.8 7183.5 6268.9 8003.6 6542.4 7240.6 7515.4 5735.34 5730.3 TRUE FALSE 6375.975471 6401.072076 6695.904034 6751.731764 7684.799664 6912.825034 6757.592785 7449.69365 6331.549117 6440.212826 0.990025585 0.993922445 1.039702292 1.048370907 1.193252439 1.073384564 1.049280974 1.156746501 0.983127311 1 12.65289265 -5.570836394 2.153681057 1.083442176 0.991982656 0.207617416 0.060510076 0.42988898 3.966503503 0.017185144 0.040327749 2.69E-06 5.570836394 -0.09145952 YLSPGWGS(ph)ASEEEPSR ddPTM_A459_MK2206_30min_R2 2 YLSPGWGSASEEEPSR 16 0 Q9BRS8;H0YMC6;Q9BRS8-2 Q9BRS8 LARP6 La-related protein 6 1 YLSPGWGS(0.998)AS(0.002)EEEPSR;YLSPGWGS(0.997)AS(0.003)EEEPSR 189.04 9.42E-07 8088000 27539.6 32087.1 34058.8 37880 29506 29698.4 37069 26031.9 28482.1 24048.7 TRUE FALSE 29648.05295 30493.70127 35194.30339 34785.08283 28347.44618 30828.59342 32201.79577 29434.35871 30959.42157 23263.99289 1.274418071 1.310768165 1.512822995 1.495232697 1.218511642 1.325163465 1.384190406 1.26523245 1.330787098 1 14.50581111 -10.74317377 0.341989715 0.79630055 1.377998558 0.58738146 0.088385226 13.39995264 1.070827344 2.592025429 0.080271745 1.81E-11 10.74317377 0.581698008 YLSVPPS(ph)PNISTSESR ddPTM_A459_MK2206_30min_R1 2 YLSVPPSPNISTSESR 16 0 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLS(0.016)VPPS(0.458)PNIS(0.039)T(0.161)S(0.277)ES(0.05)R;YLS(0.001)VPPS(0.95)PNIS(0.031)T(0.009)S(0.009)ESR 99.747 0.0063838 9216100 4144.1 4165.8 3889.1 3578.1 4731.3 4435.8 4678.2 3565.4 3921.1 3852.8 TRUE FALSE 3791.622533 3894.605663 3625.118728 3853.685882 4542.842302 4686.951163 4366.125814 3534.228084 4328.712377 4330.113951 0.875640359 0.899423365 0.837187836 0.889973318 1.049127657 1.082408273 1.008316609 0.816197477 0.999676319 1 12.08018928 -6.129726168 6.355194147 0.98839618 0.872191686 0.423793256 0.066984598 0.273770275 12.9768034 0.021945336 0.028519953 7.42E-07 6.129726168 -0.116204494 YLSVPPS(ph)PNISTSESR ddPTM_A459_MK2206_30min_R2 1 YLSVPPSPNISTSESR 16 0 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLSVPPS(0.545)PNIS(0.249)T(0.123)S(0.073)ES(0.009)R 149.19 0.00026633 7206200 161060 146030 133830 166570 137310 151570 175390 137890 119870 171100 TRUE FALSE 173390.8774 138778.3625 138291.8254 152960.6982 131918.5195 157338.1026 152361.0823 155912.6964 130296.0759 165517.021 1.047571279 0.838453723 0.835514224 0.924138782 0.797008783 0.950585635 0.920516098 0.941973795 0.787206507 1 17.33662006 YLSVPPSPNIS(ph)TSESRSPPEGDTTLFLSR ddPTM_A459_MK2206_30min_R2 1 YLSVPPSPNISTSESRSPPEGDTTLFLSR 29 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLSVPPS(0.12)PNIS(0.459)T(0.104)S(0.104)ES(0.104)RS(0.104)PPEGDT(0.005)T(0.002)LFLSR 74.123 3.79E-05 3695300 11631 26299 17564 21669 24810 23464 21914 17007 21476 18837 TRUE FALSE 12521.4783 24993.0299 18149.57499 19898.57338 23835.83474 24356.93896 19036.66548 19229.87329 23343.94366 18222.35023 0.68714947 1.371559079 0.996006265 1.09198721 1.308054913 1.336651895 1.044687718 1.055290511 1.28106108 1 14.15342142 -4.745396654 24.99739356 1.165267941 0.687148126 0.514831813 0.139173434 779.0241784 1213791.201 0.034404352 0.883552239 1.80E-05 4.745396654 -0.478119815 YLSVPPSPNISTS(ph)ESRSPPEGDTTLFLSR ddPTM_A459_MK2206_30min_R1 1 YLSVPPSPNISTSESRSPPEGDTTLFLSR 29 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLSVPPS(0.048)PNIS(0.055)T(0.055)S(0.533)ES(0.146)RS(0.146)PPEGDT(0.011)T(0.005)LFLSR 62.069 0.001189 23038000 2777 3248.7 2961.4 2914.3 3267.3 2908.7 2839.7 2845.9 2268.3 1382.6 TRUE FALSE 2540.801567 3037.20904 2760.388419 3138.759891 3137.156522 3073.38808 2650.268794 2821.018596 2504.097902 1553.886926 1.635126421 1.954588193 1.776440983 2.019940987 2.018909143 1.977871124 1.705573777 1.815459381 1.61150587 1 10.60166581 -8.882526738 0.911745588 0.99737774 1.894375591 0.822230073 0.122255489 0.479837047 0.703155176 0.120779144 0.039924111 1.31E-09 8.882526738 0.896997851 YLSVPPSPNISTS(ph)ESRSPPEGDTTLFLSR ddPTM_A459_MK2206_30min_R2 2 YLSVPPSPNISTSESRSPPEGDTTLFLSR 29 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLSVPPS(0.003)PNIS(0.181)T(0.181)S(0.466)ES(0.083)RS(0.083)PPEGDT(0.001)T(0.001)LFLSR;YLSVPPS(0.009)PNIS(0.105)T(0.083)S(0.314)ES(0.241)RS(0.241)PPEGDT(0.002)T(0.002)LFLS(0.001)R 81.94 1.08E-05 9330700 11989.9 21785.1 17506.6 21234.2 21135.5 21098.8 14363.2 17423.2 18280.1 13678.6 TRUE FALSE 12907.85596 20703.28361 18090.26131 19499.29794 20305.61407 21901.72962 12477.29459 19700.47206 19870.07006 13232.2684 0.975483233 1.564605779 1.367132283 1.473617171 1.534552766 1.655175738 0.942944491 1.48882047 1.501637471 1 13.69177278 -11.1310392 6.450896965 0.998818648 1.398198732 0.205766966 0.228873473 0.003784374 0.000229869 0.215662372 0.052167192 7.40E-12 11.1310392 0.399380084 YLSVPPSPNISTSESRS(ph)PPEGDTTLFLSR ddPTM_A459_MK2206_30min_R2 1 YLSVPPSPNISTSESRSPPEGDTTLFLSR 29 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLS(0.001)VPPS(0.048)PNIS(0.153)T(0.067)S(0.067)ES(0.054)RS(0.553)PPEGDT(0.017)T(0.017)LFLS(0.024)R 44.164 0.028914 6728600 8371.6 13687 13094 15726 19852 17001 11947 12647 16496 11449 TRUE FALSE 9012.536133 13007.32348 13530.54742 14441.1355 19072.51073 17647.98497 10378.34455 14300.00632 17930.79226 11075.42007 0.81374215 1.174431616 1.22167352 1.303890544 1.722057549 1.593437076 0.937061031 1.291147987 1.618971755 1 13.4350738 -4.591485994 1.218081195 1.364749418 0.37669835 0.306788841 0.240686701 2.795169707 2.647896604 0.075205969 3.895582945 2.56E-05 4.591485994 -0.988051068 YLT(ph)VAAVFR ddPTM_A459_MK2206_30min_R2 1 YLTVAAVFR 9 0 P04350;P68371;P07437;Q5JP53;Q5ST81 P04350;P68371;P07437 TUBB4A;TUBB4B;TUBB Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta chain 1 Y(0.062)LT(0.938)VAAVFR 107.55 0.029282 1637100 6594.7 9459.4 8545 7665.9 7757.8 9167.5 6278.4 7299.9 9997.4 7370.6 TRUE FALSE 7099.595302 8989.659951 8829.886035 7039.571448 7453.189792 9516.375636 5454.038538 8254.021994 10866.95578 7130.097926 0.995721991 1.260804556 1.23839618 0.987303614 1.045313805 1.334676709 0.764931786 1.157630944 1.524096288 1 12.79970618 -8.012887919 24.98937549 1.288319992 1.095375134 0.107544291 0.194194537 1155.639237 2240745.523 0.115479993 0.048221028 9.71E-09 8.012887919 -0.192944858 YLTET(ph)EDTVK ddPTM_A459_MK2206_30min_R1 1 YLTETEDTVK 10 0 Q96BY6;A0A2R8YD85;Q96BY6-3;Q96BY6-2 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 Y(0.204)LT(0.311)ET(0.485)EDTVK 103.92 0.032058 11264000 2193.5 2570.3 2993.4 2194.5 2464.3 1884.6 2555.2 2500.1 2676.9 2478.8 TRUE FALSE 2006.931306 2402.973003 2790.216348 2363.52077 2366.141713 1991.304423 2384.74727 2478.241889 2955.173334 2785.892458 0.720390804 0.862550525 1.001552066 0.848389091 0.849329882 0.714781512 0.856008373 0.889568397 1.060763608 1 11.44392385 -8.11829132 3.509538213 1.029649517 0.841005055 0.494860936 0.077052281 0.227295271 4.890620145 0.063947309 0.021466235 7.62E-09 8.11829132 -0.188644462 YLVLDEADR ddPTM_A459_MK2206_30min_R2 1 YLVLDEADR 9 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;F6S8Q4;A0A0D9SFB3;A0A2R8Y7T2;O15523;O15523-2;A0A2R8YDH3;D6RCM4;Q9NQI0-3;Q9NQI0-2;Q9NQI0-4;Q9NQI0;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5 A0A2R8Y645;A0A2R8Y5G6 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 0 141.52 0.030464 4059600 29355 26660 26674 26422 27634 28366 29987 28355 30622 23835 FALSE TRUE 31602.44137 25336.10317 27563.29785 24263.23808 26548.95031 29445.48801 26049.67088 32061.09586 33285.44621 23057.2659 1.370606624 1.098833803 1.195427852 1.052303347 1.151435319 1.27705896 1.129781432 1.390498596 1.443599009 1 14.49293383 -7.753496855 24.99944237 1.312786609 1.176976968 0.074070297 0.139055917 303.7631761 956115.3792 0.063702791 0.03594889 1.76E-08 7.753496855 -0.135809641 YMEDSTY(ph)YK ddPTM_A459_MK2206_30min_R1 3 YMEDSTYYK 9 0 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;H0YBZ1;H0YB16;Q05397-4;Q05397-3;E9PEI4 E7ESA6;E9PEI4 PTK2 Focal adhesion kinase 1 1 YMEDS(0.005)T(0.012)Y(0.881)Y(0.102)K;YMEDS(0.002)T(0.093)Y(0.901)Y(0.003)K;YMEDS(0.001)T(0.014)Y(0.876)Y(0.109)K 205.36 0.0071048 166231000 5340.1 5808.3 5179.9 4070.46 4616.1 3954.4 4121.9 4600.3 4675.3 4442.7 TRUE FALSE 4885.896453 5430.178614 4828.30282 4383.967534 4432.230962 4178.294711 3846.935572 4560.080062 5161.314166 4993.095217 0.978530599 1.087537565 0.966995943 0.878005995 0.887672029 0.836814547 0.770451074 0.913277209 1.033690315 1 12.2857187 -5.559310644 3.97181401 0.890816947 1.033258124 0.3170608 0.075210297 0.225080928 7.687543171 0.021447151 0.041105785 2.76E-06 5.559310644 0.142441176 YMEDSTY(ph)YK ddPTM_A459_MK2206_30min_R2 3 YMEDSTYYK 9 0 E7ESA6;Q05397-5;Q05397;Q05397-7;Q05397-2;H0YBP1;H0YBZ1;H0YB16;Q05397-4;Q05397-3;E9PEI4 E7ESA6;E9PEI4 PTK2 Focal adhesion kinase 1 1 YMEDS(0.198)T(0.198)Y(0.599)Y(0.004)K;YMEDS(0.077)T(0.16)Y(0.681)Y(0.082)K;YMEDS(0.026)T(0.008)Y(0.964)Y(0.002)K 149.57 0.01974 104691400 179156 170640 161314 156882 178637 128000 215703 140795 118206 158450 TRUE FALSE 192872.3211 162166.2657 166692.1282 144064.2388 171622.8138 132871.1297 187380.937 159197.3899 128487.3442 153279.7895 1.258302362 1.057975525 1.08750233 0.939877588 1.119670208 0.86685355 1.222476477 1.038606528 0.838253658 1 17.22580796 YMLTHQELAS(ph)DGEIETK ddPTM_A459_MK2206_30min_R1 3 YMLTHQELASDGEIETK 17 0 Q02241;H7BYN4;A0A2U3TZL8;Q02241-2;Q02241-3 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 YMLTHQELAS(1)DGEIETK;YMLTHQELAS(0.99)DGEIET(0.01)K;YMLTHQELAS(0.997)DGEIET(0.003)K 221.24 5.22E-12 39883000 16949.7 18638.7 16895.6 15557.7 14887.8 14742 14175.9 14911.7 14713.2 12918.3 TRUE FALSE 15508.03901 17425.31724 15748.77375 16755.95675 14294.7874 15576.6793 13230.25158 14781.32858 16242.68979 14518.71653 1.06814118 1.200196808 1.084722173 1.154093526 0.98457652 1.072868891 0.9112549 1.018087828 1.118741437 1 13.8256263 -6.259499259 24.95456766 1.015940016 1.129027149 0.433357958 0.061134154 158.5756167 2039656.506 0.018078321 0.02216288 5.50E-07 6.259499259 0.113087133 YMLTHQELAS(ph)DGEIETK ddPTM_A459_MK2206_30min_R2 10 YMLTHQELASDGEIETK 17 0 Q02241;H7BYN4;A0A2U3TZL8;Q02241-2;Q02241-3 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 YMLTHQELAS(0.999)DGEIET(0.001)K;YMLTHQELAS(0.982)DGEIET(0.018)K;YMLTHQELAS(0.994)DGEIET(0.006)K;YMLTHQELAS(0.997)DGEIET(0.003)K;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(0.999)DGEIET(0.001)K;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK 189.45 7.16E-08 118529600 566637 533700 560767 556201 524927 483512 688345 471941 471714 636418 TRUE FALSE 610019.1644 507197.2341 579462.6919 510757.5991 504315.7284 501912.388 597964.4746 533625.3091 512742.8311 615651.7328 0.990851048 0.823837906 0.941218324 0.829620988 0.81915749 0.815253757 0.971270676 0.866764894 0.832845591 1 19.23175494 -11.03264624 3.455553424 1.002533928 0.874693708 0.252780284 0.063477977 33096923.94 30008383.98 697697.852 0.015476752 9.28E-12 11.03264624 -0.12784022 YMLTHQELASDGEIET(ph)K ddPTM_A459_MK2206_30min_R1 1 YMLTHQELASDGEIETK 17 0 Q02241;H7BYN4;A0A2U3TZL8;Q02241-2;Q02241-3 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 YMLTHQELAS(0.352)DGEIET(0.648)K 196.45 2.05E-07 13069000 5105.5 5665.8 5359.3 4892.2 4752.7 4729.5 4442.2 4716.5 4476.8 4066.2 TRUE FALSE 4671.250415 5296.95539 4995.525648 5268.998092 4563.389895 4997.280203 4145.868943 4675.264138 4942.17938 4569.951554 1.022166288 1.159083489 1.093124421 1.152965853 0.998564173 1.093508354 0.907201946 1.023044573 1.081451154 1 12.15796316 -6.271190413 24.79010577 1.016753271 1.109587719 0.354524008 0.059139489 669.6208379 1702375.999 0.017920063 0.020570972 5.36E-07 6.271190413 0.092834449 YMNSDTTS(ph)PELR ddPTM_A459_MK2206_30min_R1 3 YMNSDTTSPELR 12 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 YMNS(0.008)DT(0.005)T(0.037)S(0.95)PELR;YMNS(0.007)DT(0.014)T(0.057)S(0.923)PELR;YMNSDT(0.002)T(0.035)S(0.964)PELR 135.04 0.001523 76841000 9876.8 10146.7 10450.9 8607.7 9987.8 8653.9 9712.3 9021.4 9093 9021.3 TRUE FALSE 9036.726295 9486.147986 9741.522026 9270.666545 9589.964776 9143.876339 9064.410188 8942.526851 10038.24989 10138.92675 0.891290224 0.935616581 0.960804064 0.914363697 0.945856007 0.901858408 0.89402068 0.881999355 0.990070264 1 13.30761732 -8.347349087 6.839446605 0.997602316 0.917741413 0.63368927 0.02409458 0.18985405 12.6247267 0.024761346 0.006425714 4.49E-09 8.347349087 -0.079860904 YMNSDTTS(ph)PELR ddPTM_A459_MK2206_30min_R2 3 YMNSDTTSPELR 12 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 YMNS(0.002)DT(0.015)T(0.331)S(0.651)PELR;YMNS(0.015)DT(0.067)T(0.164)S(0.755)PELR;YMNS(0.006)DT(0.001)T(0.021)S(0.972)PELR 120.6 0.0039914 88532000 234845 243296 243217 283587 254534 234187 272446 193430 211593 242003 TRUE FALSE 252824.9138 231214.2744 251325.7334 260417.035 244539.7162 243099.1504 236673.5129 218711.9651 229996.9767 234106.4619 1.079957006 0.987645845 1.073553166 1.112387214 1.044566281 1.038412816 1.010965315 0.93424147 0.982446084 1 17.83680523 -7.357138448 2.250245334 0.96907539 1.05779707 0.548669785 0.034138392 0.241111008 2.383977542 0.018047932 0.010917573 4.39E-08 7.357138448 0.08872168 YMPAVTSTPTVNQHETS(ph)TSK ddPTM_A459_MK2206_30min_R2 3 YMPAVTSTPTVNQHETSTSK 20 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 YMPAVTSTPTVNQHET(0.228)S(0.625)T(0.059)S(0.088)K;YMPAVTSTPTVNQHET(0.191)S(0.551)T(0.191)S(0.067)K;YMPAVTSTPTVNQHET(0.192)S(0.548)T(0.192)S(0.068)K 119.25 0.00016888 20017400 40623.6 53656 50213.6 61374 61286 48577 61414 43327.6 45411.8 50448 TRUE FALSE 43733.77405 50991.52106 51887.69636 56359.54787 58879.6037 50425.63177 53350.26803 48990.66609 49361.63628 48801.88589 0.896149262 1.044867839 1.063231378 1.154864138 1.206502631 1.033272195 1.09320095 1.003868297 1.011469852 1 15.57464928 -10.64827921 14.25022097 0.999989502 1.062414325 0.037466437 0.080672847 0 0 0.082917123 0.020110356 2.25E-11 10.64827921 0.062424823 YMS(ph)FTDK ddPTM_A459_MK2206_30min_R1 1 YMSFTDK 7 0 H0YCM0;E9PM17;B3KNX7;Q13153;Q13153-2 H0YCM0 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 Y(0.003)MS(0.952)FT(0.045)DK 101.46 0.019909 25257000 6237.6 7397.1 7244.3 6628.8 6914.1 7152.8 9078.1 7707 8478.5 8460.3 TRUE FALSE 5707.059365 6915.547446 6752.5771 7139.351325 6638.696756 7557.785355 8472.516513 7639.618512 9359.870416 9508.425836 0.600210746 0.727307292 0.71016772 0.750844719 0.698190938 0.794851376 0.891053541 0.803457759 0.984376444 1 13.2149908 -7.439089673 0.418517653 1.016557294 0.647760839 0.837740019 0.04904076 0.426031441 0.181288618 0.052462282 0.052276975 3.64E-08 7.439089673 -0.368796455 YMS(ph)FTDK ddPTM_A459_MK2206_30min_R2 2 YMSFTDK 7 0 H0YCM0;E9PM17;B3KNX7;Q13153;Q13153-2 H0YCM0 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 Y(0.034)MS(0.847)FT(0.119)DK;Y(0.089)MS(0.909)FT(0.003)DK 91.265 0.028563 48333000 167719 202449 220360 207798 213900 188889 237760 164650 150475 204412 TRUE FALSE 180559.6956 192395.677 227706.6924 190820.2387 205501.2112 196077.3033 206541.8264 186170.3203 163563.0435 197742.0532 0.913107216 0.972962877 1.151533974 0.964995739 1.039238786 0.991581204 1.044501274 0.941480668 0.827153561 1 17.59326019 -7.931939909 5.48216893 0.904257125 1.01312873 0.247760818 0.070996156 0.238085895 13.1880142 0.039671013 0.018378267 1.17E-08 7.931939909 0.108871606 YMS(ph)QMSVPEQAELEK ddPTM_A459_MK2206_30min_R2 3 YMSQMSVPEQAELEK 15 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 YMS(0.868)QMS(0.132)VPEQAELEK;YMS(0.992)QMS(0.008)VPEQAELEK;YMS(0.603)QMS(0.396)VPEQAELEK 205.95 2.15E-06 31542100 108384 83610 114191 119010 134094 73161 109254 76152 83546 149129 TRUE FALSE 116681.9624 79458.04898 117998.0709 109286.5023 128828.7958 75945.19312 94908.81856 86105.32787 90812.68006 144262.9329 0.808814572 0.550786313 0.817937557 0.757550814 0.893013841 0.526435943 0.657887765 0.596863838 0.629494203 1 17.13834113 -10.64581646 5.105568992 1.000010259 0.691671489 0.384297742 0.116486786 1.38E-05 2.37E-06 0.114487424 0.027766356 2.26E-11 10.64581646 -0.308338771 YMSFT(ph)DK ddPTM_A459_MK2206_30min_R1 1 YMSFTDK 7 0 H0YCM0;E9PM17;B3KNX7;Q13153;Q13153-2 H0YCM0 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 YMS(0.191)FT(0.809)DK 124.08 0.015861 25385000 6481.6 8829.1 8045.6 7648.6 7508.4 7522 9621.8 8186.2 9370.2 9038.8 TRUE FALSE 5930.305884 8254.323985 7499.487088 8237.696497 7209.324529 7947.88914 8979.947278 8114.628916 10344.26582 10158.59478 0.583772265 0.812545845 0.738240598 0.810909055 0.70967734 0.782380763 0.88397534 0.798794429 1.018277236 1 13.31041323 -7.866256578 0.666010059 1.017118189 0.727660231 0.660502275 0.07185735 0.430777178 0.390883599 0.065196589 0.032224219 1.36E-08 7.866256578 -0.289457957 YMSQMS(ph)VPEQAELEK ddPTM_A459_MK2206_30min_R1 4 YMSQMSVPEQAELEK 15 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 YMS(0.003)QMS(0.997)VPEQAELEK;YMS(0.013)QMS(0.987)VPEQAELEK;YMS(0.205)QMS(0.795)VPEQAELEK;YMSQMS(1)VPEQAELEK 235.26 1.09E-14 68411700 12797.4 9613.9 13894.7 10584.2 11374.5 7368 8478.9 9352.5 7464.1 7908.6 TRUE FALSE 11708.91393 8988.033363 12951.56648 11399.39692 10921.42958 7785.169793 7913.288052 9270.732079 8240.019906 8888.377075 1.317328667 1.011211978 1.457135129 1.282505999 1.228731577 0.875882034 0.890296168 1.043017415 0.927055618 1 13.11770431 -6.713902302 7.032347667 0.946560121 1.259636516 0.659244148 0.112253661 0.132033579 15.33220952 0.037482863 0.037129299 1.93E-07 6.713902302 0.313076394 YMSQMS(ph)VPEQAELEK ddPTM_A459_MK2206_30min_R2 2 YMSQMSVPEQAELEK 15 0 A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154;Q15154-4;Q15154-2;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 YMS(0.008)QMS(0.992)VPEQAELEK;YMS(0.004)QMS(0.996)VPEQAELEK 196.66 3.08E-05 22788300 104162 90407 112019 125222 139489 84773 118580 86482 89859 156197 TRUE FALSE 112136.7228 85917.51984 115753.6576 114990.962 134011.961 87999.09592 103010.3036 97785.49434 97674.77339 151100.3047 0.742134326 0.568612486 0.766071636 0.761024025 0.886907285 0.582388607 0.681734585 0.647156169 0.646423405 1 17.20514704 -11.83184386 2.294220056 2.543505503 0.698272128 0.500606696 0.09047482 7326232.32 824890.6047 58882529.78 0.023108205 1.47E-12 11.83184386 -1.845233375 YNAPTSHVT(ph)PSVK ddPTM_A459_MK2206_30min_R2 2 YNAPTSHVTPSVK 13 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 YNAPTSHVT(0.98)PS(0.02)VK;YNAPTSHVT(0.982)PS(0.018)VK 98.552 0.016897 49245000 275020 337110 330790 405700 310980 302150 316870 255560 339180 323900 TRUE FALSE 296075.7427 320369.6076 341818.3735 372553.0122 298769.3627 313648.53 275264.5884 288962.5695 368681.2633 313331.1695 0.944929108 1.022463255 1.090917236 1.189007186 0.953525827 1.001012859 0.878510072 0.922227335 1.176650455 1 18.25732877 YNDWS(ph)DDDDDSNESK ddPTM_A459_MK2206_30min_R1 1 YNDWSDDDDDSNESK 15 0 H3BV87;Q9UH62 H3BV87 ARMCX3 Armadillo repeat-containing X-linked protein 3 1 YNDWS(1)DDDDDSNESK 184.22 5.20E-14 0 1466.5 1424.4 1442.9 1301.9 801.11 1013.4 1143.7 1320.3 1596.8 1420.9 TRUE FALSE 1341.766474 1331.671301 1344.959968 1402.172564 769.2000923 1070.777832 1067.40586 1308.756756 1762.793074 1596.931819 0.840215254 0.833893648 0.842215023 0.878041596 0.481673721 0.670521947 0.668410415 0.819544542 1.103862452 1 10.641087 -8.138213146 4.298437353 1.048902945 0.744291413 0.525572659 0.114605972 0.195534022 5.717898696 0.093683232 0.032593518 7.27E-09 8.138213146 -0.304611532 YNDWS(ph)DDDDDSNESK ddPTM_A459_MK2206_30min_R2 1 YNDWSDDDDDSNESK 15 0 H3BV87;Q9UH62 H3BV87 ARMCX3 Armadillo repeat-containing X-linked protein 3 1 YNDWS(0.527)DDDDDS(0.469)NES(0.004)K 265.93 2.20E-37 12063000 57762 56793 54719 53337 40041 41594 71005 38723 37596 55567 TRUE FALSE 62184.30313 53972.7422 56543.30415 48979.19648 38468.78915 43176.88882 61681.95821 43784.22906 40866.03212 53753.85334 1.156834334 1.004072059 1.051893039 0.911175543 0.715647098 0.803233371 1.147489052 0.814531914 0.76024377 1 15.71408056 -5.792632752 3.909248363 0.869787482 1.067945617 0.344215033 0.122304008 0.26049833 8.517577211 0.036356303 0.059389345 1.61E-06 5.792632752 0.198158135 YNDWSDDDDDS(ph)NESK ddPTM_A459_MK2206_30min_R2 1 YNDWSDDDDDSNESK 15 0 H3BV87;Q9UH62 H3BV87 ARMCX3 Armadillo repeat-containing X-linked protein 3 1 YNDWS(0.026)DDDDDS(0.974)NES(0.001)K 297.73 1.93E-80 12330000 59316 48062 43715 45402 48205 37582 62668 35115 37410 47946 TRUE FALSE 63857.27857 45675.31097 45172.43628 41692.51137 46312.22949 39012.20934 54439.61632 39704.65107 40663.85418 46381.52595 1.376782615 0.984773787 0.973931654 0.8989034 0.998505947 0.841115262 1.173734913 0.856044519 0.876725234 1 15.50126266 -4.757219763 4.361450258 0.952304579 1.417361392 0.655838006 0.091715 0.132343476 5.258665343 0.022133904 0.19689723 1.75E-05 4.757219763 0.465056813 YNGLIHR ddPTM_A459_MK2206_30min_R1 2 YNGLIHR 7 0 P46779;H0YMF4;H0YKD8;P46779-4;P46779-5;P46779-2;P46779-3;H0YLP6 P46779 RPL28 60S ribosomal protein L28 0 ; 148.21 0.0039645 19678800 20653 20920 21222.5 18366.5 21464 18873.7 19778.9 17842.6 18035.2 15233.7 FALSE TRUE 18896.3539 19558.1042 19781.97583 19781.09101 20609.04343 19942.31258 18459.48567 17686.60403 19910.02358 17120.96576 1.103696728 1.142348187 1.155424063 1.155372383 1.203731361 1.164789 1.078180164 1.033037755 1.162903066 1 14.06347646 -7.287410277 7.039064333 1.070913219 1.156073164 0.464871406 0.044999351 0.188651592 37.96522335 0.01829814 0.012571458 5.16E-08 7.287410277 0.085159945 YNGLIHR ddPTM_A459_MK2206_30min_R2 2 YNGLIHR 7 0 P46779;H0YMF4;H0YKD8;P46779-4;P46779-5;P46779-2;P46779-3;H0YLP6 P46779 RPL28 60S ribosomal protein L28 0 ; 119.56 0.014134 14292000 141565 156659 148684 169081 167811 164980 175523 138612 149603 154658 FALSE TRUE 152403.3252 148879.5419 153641.0504 155266.5414 161221.897 171258.4295 152476.6193 156729.0643 162615.1985 149611.5221 1.018660348 0.995107461 1.026933275 1.03779802 1.07760348 1.144687435 1.019150244 1.04757349 1.086916276 1 17.19086176 -5.863502366 2.340655991 1.066382952 1.009088173 0.25175477 0.037721586 0.385438732 4.297245147 0.011622397 0.019884911 1.37E-06 5.863502366 -0.057294779 YNHGT(ph)VVEFY(ph)CDPGY(ph)SLTSDY(ph)K ddPTM_A459_MK2206_30min_R2 1 YNHGTVVEFYCDPGYSLTSDYK 22 0 B7Z369;V9GZ49;V9GYN8;Q5VX71-2;Q5VX71 B7Z369 SUSD4 Sushi domain-containing protein 4 4 Y(0.294)NHGT(0.751)VVEFY(0.862)CDPGY(0.607)S(0.446)LT(0.139)S(0.134)DY(0.767)K 42.106 0.027141 10500000 16644 20267 17339 17641 22389 16511 21052 15943 15741 17785 TRUE FALSE 17918.27744 19260.57025 17917.07361 16199.67387 21509.89536 17139.33767 18287.84711 18026.80484 17110.12373 17204.67691 1.041477125 1.11949619 1.041407154 0.941585475 1.250235356 0.99620224 1.062957893 1.047785142 0.994504216 1 14.07051318 -8.126069425 1.933566433 0.994120351 1.066658314 0.106153488 0.076497871 0.811893475 5.402060996 0.067228918 0.020819668 7.48E-09 8.126069425 0.072537963 YNHGT(ph)VVEFY(ph)CDPGYS(ph)LTSDY(ph)K ddPTM_A459_MK2206_30min_R2 1 YNHGTVVEFYCDPGYSLTSDYK 22 0 B7Z369;V9GZ49;V9GYN8;Q5VX71-2;Q5VX71 B7Z369 SUSD4 Sushi domain-containing protein 4 4 Y(0.15)NHGT(0.858)VVEFY(0.964)CDPGY(0.454)S(0.549)LT(0.362)S(0.341)DY(0.321)K 43.291 0.03719 7157900 22503 28277 22866 28245 26736 19370 26767 21095 19678 26328 TRUE FALSE 24225.84698 26872.8053 23628.34103 25937.29315 25686.2103 20107.13892 23252.46075 23852.18893 21389.55687 25468.91952 0.951192569 1.055121529 0.927732369 1.018390008 1.008531606 0.789477501 0.912973977 0.93652143 0.839829772 1 14.63645014 -6.713939553 24.99998967 0.892868498 0.993563916 0.37875429 0.061683591 118.8956652 62576.42103 0.019303506 0.019303463 1.93E-07 6.713939553 0.100695418 YNLDAS(ph)EEEDSNK ddPTM_A459_MK2206_30min_R1 4 YNLDASEEEDSNK 13 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YNLDAS(1)EEEDSNK;Y(0.001)NLDAS(0.934)EEEDS(0.065)NK;YNLDAS(1)EEEDSNK;YNLDAS(1)EEEDSNK 304.86 1.88E-74 134768000 14613.2 16808.9 17354.9 10945.6 9046.1 10318.8 16090 10960.4 23724.2 30094.2 TRUE FALSE 13370.2706 15714.63755 16176.89774 11788.63201 8685.774682 10903.04154 15016.66546 10864.57438 26190.41549 33822.4967 0.395307027 0.464620862 0.478288102 0.34854411 0.256804658 0.322360636 0.443984535 0.321223311 0.77434897 1 15.04569554 -8.433497195 3.237637853 0.995968972 0.380074251 0.901667006 0.068909705 0.068975148 1.392428426 0.073000121 0.019463297 3.69E-09 8.433497195 -0.615894721 down YNLDAS(ph)EEEDSNK ddPTM_A459_MK2206_30min_R2 4 YNLDASEEEDSNK 13 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 Y(0.006)NLDAS(0.987)EEEDS(0.007)NK;YNLDAS(1)EEEDSNK;Y(0.001)NLDAS(0.997)EEEDS(0.002)NK;YNLDAS(0.999)EEEDS(0.001)NK 188.9 0.000152 188385900 440935 248591 318204 265837 230656.6 182960.6 358923 282860 160671.7 363996 TRUE FALSE 474693.3226 236246.3324 328812.7625 244117.2667 221599.8629 189923.2938 311795.979 319830.7732 174646.634 352118.8403 1.348105436 0.670927838 0.933811898 0.693280901 0.629332593 0.539372712 0.885485078 0.908303495 0.495987758 1 18.4257029 -4.757111166 24.99930988 0.745596653 1.348106326 0.540495675 0.165182027 99.33405388 573669.7551 0.040218147 0.307113203 1.75E-05 4.757111166 0.602509673 YNLDAS(ph)EEEDSNKK ddPTM_A459_MK2206_30min_R1 3 YNLDASEEEDSNKK 14 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YNLDAS(1)EEEDSNKK;YNLDAS(0.92)EEEDS(0.08)NKK;YNLDAS(0.979)EEEDS(0.021)NKK 181.51 0.00013455 83725000 12490.4 16599 16040.3 11615.3 9175.5 8459.5 12779 10881.4 19108.7 21427.8 TRUE FALSE 11428.02589 15518.40208 14951.52913 12509.91242 8810.020406 8938.469579 11926.53623 10786.26507 21095.11775 24082.43764 0.474537755 0.644386682 0.620847829 0.51946205 0.365827602 0.37116133 0.495237916 0.447889256 0.875954422 1 14.55569381 -8.364810702 3.83636369 0.991259527 0.494209742 0.809707764 0.087101817 0.10571675 2.62136647 0.095224892 0.025332722 4.32E-09 8.364810702 -0.497049786 YNLDAS(ph)EEEDSNKK ddPTM_A459_MK2206_30min_R2 3 YNLDASEEEDSNKK 14 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YNLDAS(0.998)EEEDS(0.002)NKK;YNLDAS(0.999)EEEDS(0.001)NKK;Y(0.001)NLDAS(0.999)EEEDS(0.001)NKK 183.76 0.00013906 173734000 173478 117335 145738 117555 103234 69746 153088 116336 92803 166070 TRUE FALSE 186759.6091 111508.3145 150596.8322 107950.3805 99180.51445 72400.2329 132987.3617 131541.5146 100874.8372 160651.1495 1.162516481 0.694102189 0.937415217 0.671955232 0.617365732 0.450667382 0.827802117 0.8188022 0.627912327 1 17.29357178 -3.504806887 9.655875217 0.762325742 0.899305887 0 0.20094958 0 0 0.045528883 0 0.000312747 3.504806887 0.136980145 YNLDASEEEDS(ph)NK ddPTM_A459_MK2206_30min_R2 1 YNLDASEEEDSNK 13 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 Y(0.049)NLDAS(0.101)EEEDS(0.85)NK 167.92 0.00029354 57688000 144680 89506 119850 97597 71078 61473 121600 96467 60057 120330 TRUE FALSE 155756.812 85061.26219 123845.7392 89623.0129 68287.12058 63812.39809 105633.7739 109075.5681 65280.6493 116403.642 1.338075076 0.730743994 1.063933543 0.769933066 0.586640757 0.548199326 0.907478255 0.937046009 0.560812774 1 16.82877667 -5.799214571 7.442619733 0.745419854 1.012846893 0.28756752 0.203581062 0.27289491 43.23563668 0.05674424 0.085749678 1.59E-06 5.799214571 0.267427039 YNLINEGS(ph)PPSK ddPTM_A459_MK2206_30min_R1 1 YNLINEGSPPSK 12 0 Q68D06 Q68D06 SLFN13 Schlafen family member 13 1 YNLINEGS(1)PPSK 126.56 0.0026807 0 2290.1 1849.3 1798.1 1752.3 1867.2 1674.7 1670.4 1643.6 1465.1 1647.5 TRUE FALSE 2095.314969 1728.910234 1676.049982 1887.26245 1792.82547 1769.520067 1558.970664 1629.230178 1617.402388 1851.604738 1.131621089 0.933736125 0.90518778 1.019257734 0.968254959 0.955668362 0.84195651 0.879901712 0.873513852 1 10.85456044 -7.060197237 4.664778182 0.888932917 0.983557778 0.28091768 0.068550678 0.28155391 12.42843875 0.026139257 0.02050596 8.71E-08 7.060197237 0.094624861 YNLINEGS(ph)PPSK ddPTM_A459_MK2206_30min_R2 1 YNLINEGSPPSK 12 0 Q68D06 Q68D06 SLFN13 Schlafen family member 13 1 YNLINEGS(0.944)PPS(0.055)K 80.507 0.04001 9101700 60159 85157 67469 70503 87355 75786 68161 57030 54569 41164 TRUE FALSE 64764.81929 80928.22721 69718.38279 64742.67937 83925.00378 78670.08934 59211.37882 64484.01681 59315.31298 39820.82205 1.626405884 2.032309306 1.750802198 1.625849896 2.107565827 1.975601841 1.486945165 1.619354235 1.489555211 1 15.28123538 -8.53775579 0.736654288 1.005401177 1.847428743 0.670859517 0.176270849 0.453678547 0.556198057 0.177528175 0.068118198 2.90E-09 8.53775579 0.842027566 YNS(ph)HSLENESIKR ddPTM_A459_MK2206_30min_R1 1 YNSHSLENESIKR 13 1 Q13496;Q13496-2;C9J2A2 Q13496 MTM1 Myotubularin 1 Y(0.014)NS(0.955)HS(0.03)LENES(0.001)IKR 71.286 0.029943 7284500 2587.3 2454.5 2552.6 2123.7 3076 1915.1 2331.6 2481.9 1749.5 2077.7 TRUE FALSE 2367.236549 2294.711604 2379.336624 2287.267742 2953.476406 2023.531307 2176.063218 2460.20101 1931.366786 2335.101162 1.013761882 0.982703294 1.018943703 0.979515483 1.264817326 0.866571153 0.931892482 1.053573631 0.827101976 1 11.18926934 YNS(ph)YDISR ddPTM_A459_MK2206_30min_R1 1 YNSYDISR 8 0 G3V1S3;Q6ZUT9;Q6ZUT9-2;H0YGE5;Q6ZUT9-3;Q6ZUT9-4 G3V1S3 DENND5B DENN domain-containing protein 5B 1 Y(0.017)NS(0.922)Y(0.003)DIS(0.058)R 100.09 0.018127 5920300 1909.8 2014.3 2225 1531.2 2287.8 1563.6 1990.1 1715.7 1746.8 1608 TRUE FALSE 1747.361481 1883.168704 2073.973199 1649.133289 2196.672082 1652.129681 1857.34406 1700.699816 1928.386111 1807.21118 0.966882842 1.042030242 1.147609766 0.912529376 1.215503814 0.914187395 1.027740466 0.941063134 1.067050787 1 10.81954939 YNSNLAT(ph)PIAIK ddPTM_A459_MK2206_30min_R2 1 YNSNLATPIAIK 12 0 Q8IX90 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 YNS(0.001)NLAT(0.999)PIAIK 139.77 0.0026432 3670800 36644 32213 28773 33284 33187 31407 32677 20179 23852 26518 TRUE FALSE 39449.49281 30613.34926 29732.27746 30564.59073 31883.91163 32602.21539 28386.47065 22816.46458 25926.60385 25652.71983 1.537828857 1.193376354 1.159030218 1.191475638 1.242905697 1.270906774 1.106567679 0.88943647 1.010676607 1 14.64682418 -7.496408424 3.506706993 0.963594252 1.252281457 0.624893887 0.10393605 0.162877863 4.194500653 0.050855935 0.030180399 3.19E-08 7.496408424 0.288687204 YNSYDIS(ph)R ddPTM_A459_MK2206_30min_R2 1 YNSYDISR 8 0 G3V1S3;Q6ZUT9;Q6ZUT9-2;H0YGE5;Q6ZUT9-3;Q6ZUT9-4 G3V1S3 DENND5B DENN domain-containing protein 5B 1 YNS(0.115)YDIS(0.884)R 118.23 0.0084692 6436300 48437 56653 57562 61895 65442 46432 77891 45414 39016 56118 TRUE FALSE 52145.37396 53839.6944 59481.08835 56837.98051 62872.41826 48199.0023 67663.81814 51349.76573 42409.54116 54286.87426 0.960552153 0.991762652 1.095680847 1.046993058 1.158151379 0.887857386 1.246412122 0.945896525 0.781211697 1 15.7283158 -7.990845298 24.99876608 0.881588553 1.054820822 0.291247935 0.106748177 205.4749913 561090.9446 0.054876852 0.026306165 1.02E-08 7.990845298 0.173232269 YNTEGRVS(ph)PSPSQESLSSSK ddPTM_A459_MK2206_30min_R1 2 YNTEGRVSPSPSQESLSSSK 20 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83;Q5JSH3-3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 YNT(0.002)EGRVS(0.987)PS(0.008)PS(0.002)QESLSSSK;Y(0.001)NT(0.005)EGRVS(0.963)PS(0.021)PS(0.01)QESLSSSK 99.064 0.00046227 43253000 8170.8 6401.8 5705.1 3957.5 5258.3 4261.1 4916.5 4664.6 4510.2 4037 TRUE FALSE 7475.830553 5985.041656 5317.853707 4262.307336 5048.850776 4502.3598 4588.529256 4623.817894 4979.05143 4537.134038 1.647698854 1.319123836 1.172073309 0.939427246 1.112784135 0.992335638 1.011327683 1.019105421 1.097400118 1 12.14756557 -4.786465771 1.241406951 1.025715016 1.928459398 0.926742149 0.054499682 0.333419629 0.442844406 0.015863551 0.388634901 1.64E-05 4.786465771 0.902744382 YNTEGRVS(ph)PSPSQESLSSSK ddPTM_A459_MK2206_30min_R2 4 YNTEGRVSPSPSQESLSSSK 20 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83;Q5JSH3-3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 Y(0.002)NT(0.006)EGRVS(0.981)PS(0.008)PS(0.001)QESLSSSK;Y(0.004)NT(0.004)EGRVS(0.98)PS(0.009)PS(0.002)QESLSSSK;YNTEGRVS(0.996)PS(0.004)PS(0.001)QESLSSSK;Y(0.001)NT(0.013)EGRVS(0.972)PS(0.014)PSQESLSSSK 120.54 0.00013752 90638000 137210 144364 114549 132136 104483 107861 115280 96790 95261 114718 TRUE FALSE 147714.9031 137195.0937 118368.0065 121340.0661 100380.4724 111965.7259 100143.5975 109440.7853 103546.6296 110974.7611 1.331067548 1.236272936 1.066620963 1.093402364 0.904534252 1.008929642 0.902399758 0.986177256 0.933064677 1 16.75987208 -5.088943426 0.851062249 0.952767706 1.45633987 0.885707195 0.045432153 0.455498153 0.348540105 0.016170597 0.197068574 8.15E-06 5.088943426 0.503572164 YNVSTT(ph)PYLQSVK ddPTM_A459_MK2206_30min_R1 1 YNVSTTPYLQSVK 13 0 Q8WWK9-6;Q8WWK9-5;Q8WWK9 Q8WWK9-6 CKAP2 Cytoskeleton-associated protein 2 1 YNVST(0.209)T(0.79)PYLQSVK 139.74 0.002148 13538000 5194.6 5147 4879.5 4605.3 4352.4 4964.1 4235.2 3614 4392.7 3862.1 TRUE FALSE 4752.771992 4811.929364 4548.293135 4960.001004 4179.034692 5245.163052 3952.677536 3582.403179 4849.336884 4340.566105 1.094965928 1.108594881 1.047857128 1.14270832 0.962785634 1.208405292 0.91063641 0.825330865 1.117213001 1 12.0836675 -7.284451203 24.98789954 0.948739297 1.088995352 0.32622779 0.091037018 876.0385239 951261.8916 0.036148119 0.024388744 5.19E-08 7.284451203 0.140256055 YNVSTT(ph)PYLQSVK ddPTM_A459_MK2206_30min_R2 1 YNVSTTPYLQSVK 13 0 Q8WWK9-6;Q8WWK9-5;Q8WWK9 Q8WWK9-6 CKAP2 Cytoskeleton-associated protein 2 1 Y(0.002)NVS(0.005)T(0.016)T(0.977)PYLQSVK 94.781 0.036322 7922500 60136 49092 46051 55892 59216 46489 62437 44523 40832 54703 TRUE FALSE 64740.0584 46654.16267 47586.31736 51325.44481 56890.8823 48258.17147 54238.9469 50342.30897 44383.49355 52918.04559 1.223402295 0.881630494 0.899245557 0.969904392 1.075075273 0.911941681 1.024961264 0.951325931 0.83872133 1 15.69147216 -8.001418127 24.6264158 0.911248318 0.988305988 0.085447506 0.10137128 102.4385184 1778861.93 0.054798787 0.025731048 9.97E-09 8.001418127 0.077057669 YNVTTS(ph)KQLY(ph)TVAVS(ph)CLLLAS(ph)K ddPTM_A459_MK2206_30min_R1 1 YNVTTSKQLYTVAVSCLLLASK 22 1 E5RFJ6;E7EN43;B4DZA8 E5RFJ6 CCNJL 4 Y(0.285)NVT(0.377)T(0.404)S(0.425)KQLY(0.42)T(0.089)VAVS(1)CLLLAS(1)K 63.901 0.0061206 7280900 2020.1 1655.2 1749.2 1883.5 1298.6 1002.8 1229.6 1382 1106.4 890.49 TRUE FALSE 1848.279887 1547.446179 1630.469178 2028.567496 1246.874012 1059.577669 1147.575628 1369.91732 1221.414239 1000.810624 1.84678284 1.546192798 1.629148551 2.026924423 1.245864085 1.058719446 1.146646129 1.368807731 1.220424933 1 9.966953294 -6.375671063 6.60461142 1.178993551 1.735680418 0.782789917 0.151978367 0.120854656 6.211417246 0.048237218 0.054704669 4.21E-07 6.375671063 0.556686867 YPDIAS(ph)PTFR ddPTM_A459_MK2206_30min_R1 2 YPDIASPTFR 10 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8 Q8IVL0-3 NAV3 Neuron navigator 3 1 YPDIAS(0.701)PT(0.299)FR;YPDIAS(0.719)PT(0.281)FR 114.71 0.006874 52684000 5506.2 5691.2 6143.3 4697.9 4965.7 5155.7 6768.2 4640.6 5297.1 5892.2 TRUE FALSE 5037.868776 5320.701846 5726.309912 5059.733072 4767.905654 5447.611279 6316.705727 4600.027723 5847.752501 6622.17022 0.76075797 0.803467997 0.864718019 0.764059652 0.719991407 0.822632324 0.953872449 0.694640514 0.883056809 1 12.69308838 -7.001038475 24.9906674 0.861846759 0.785692723 0.23227145 0.082419775 73.59018743 1770972.053 0.028909308 0.025184519 9.98E-08 7.001038475 -0.076154036 YPDVAS(ph)PTLR ddPTM_A459_MK2206_30min_R2 1 YPDVASPTLR 10 0 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;Q8IVL1-5;E9PNV5 A0A0A0MTL4 NAV2 Neuron navigator 2 1 YPDVAS(0.69)PT(0.31)LR 99.539 0.018386 5630300 18675 17812 19580 21957 17059 28520 16640 18371 22868 20217 TRUE FALSE 20104.77236 16927.48198 20232.78743 20163.04286 16389.17795 29605.34858 14455.14801 20772.15278 24857.0173 19557.32095 1.027992148 0.865531738 1.034537782 1.03097162 0.838007311 1.513773214 0.739116981 1.062116475 1.270982737 1 14.25542114 YPDVAS(ph)PTLRR ddPTM_A459_MK2206_30min_R1 1 YPDVASPTLRR 11 1 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;Q8IVL1-5;E9PNV5 A0A0A0MTL4 NAV2 Neuron navigator 2 1 YPDVAS(0.901)PT(0.099)LRR 73.927 0.028919 7880500 3800.4 3158.1 3160.1 2953.3 3828.3 3229.2 3540.2 3491 2680.6 1963.7 TRUE FALSE 3477.156023 2952.507116 2945.601217 3180.763678 3675.810704 3412.034513 3304.039717 3460.478555 2959.257963 2206.977981 1.57552819 1.337805425 1.334676305 1.441230363 1.665540271 1.546021094 1.497087758 1.567971491 1.340864289 1 11.10785652 -8.61090825 4.013895646 1.000116303 1.489770171 0.699695964 0.098671768 0.259156221 10.0010405 0.104551622 0.027382487 2.45E-09 8.61090825 0.489653867 YPDVASPT(ph)LR ddPTM_A459_MK2206_30min_R1 2 YPDVASPTLR 10 0 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;Q8IVL1-5;E9PNV5 A0A0A0MTL4 NAV2 Neuron navigator 2 1 YPDVAS(0.226)PT(0.774)LR;YPDVAS(0.45)PT(0.55)LR 140.63 0.0032677 24790000 5565.1 4995 5037.1 3957.3 5467.9 4617.4 5648.6 4553.4 4456.6 4316.2 TRUE FALSE 5091.759021 4669.824592 4695.195686 4262.091932 5250.101965 4878.833198 5271.7922 4513.590104 4919.879518 4850.923442 1.049647368 0.962667139 0.967897297 0.878614553 1.082289182 1.005753493 1.086760544 0.930459975 1.014215041 1 12.2440437 -6.277168796 24.91578834 1.019070429 0.964788811 0.187701709 0.056245995 1391.588409 2204305.064 0.017508014 0.019923974 5.28E-07 6.277168796 -0.054281618 YPDVASPT(ph)LR ddPTM_A459_MK2206_30min_R2 1 YPDVASPTLR 10 0 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;Q8IVL1-5;E9PNV5 A0A0A0MTL4 NAV2 Neuron navigator 2 1 YPDVAS(0.02)PT(0.98)LR 164.48 0.0008762 12911000 27864 35041 32357 36600 29186 25197 37370 26639 30181 26971 TRUE FALSE 29997.28926 33300.91489 33435.76623 33609.66292 28040.01099 26155.88949 32463.27411 30120.80877 32806.08883 26090.93848 1.149720593 1.276340248 1.281508761 1.288173783 1.074703044 1.002489409 1.244235585 1.154454785 1.25737481 1 14.67126122 -6.255624491 24.95787606 1.130047633 1.253219943 0.324365162 0.089085362 606.1915832 2601808.923 0.027274009 0.034215802 5.55E-07 6.255624491 0.12317231 YPDVASPT(ph)LRR ddPTM_A459_MK2206_30min_R2 2 YPDVASPTLRR 11 1 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;Q8IVL1-5;E9PNV5 A0A0A0MTL4 NAV2 Neuron navigator 2 1 YPDVAS(0.423)PT(0.577)LRR;YPDVAS(0.003)PT(0.997)LRR 117.27 0.0070485 7178500 41549 69866 53014 64623 66948 70303 46782 48712 64124 46282 TRUE FALSE 44730.02339 66396.55603 54781.4603 59343.09418 64319.28513 72978.42993 40639.4672 55078.82565 69701.38961 44771.82213 0.999066405 1.482998745 1.223570042 1.325456311 1.436601909 1.630008038 0.907701882 1.230211839 1.556813779 1 15.45030341 -10.75150444 5.237322299 0.999971526 1.312171636 0.152340282 0.219524338 7.18E-05 1.06E-05 0.208990325 0.050682982 1.77E-11 10.75150444 0.31220011 YPESNRT(ph)PVKPSSVEEEDSFFR ddPTM_A459_MK2206_30min_R1 1 YPESNRTPVKPSSVEEEDSFFR 22 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 Y(0.071)PES(0.353)NRT(0.525)PVKPS(0.026)S(0.026)VEEEDSFFR 65.598 0.022206 38803000 1232 1374 1379.4 928.13 1442.9 1189.9 1324 1370.4 1196.3 1128.6 TRUE FALSE 1127.211931 1284.55235 1285.770171 999.6147334 1385.426238 1257.27111 1235.678376 1358.418737 1320.659666 1268.419488 0.888674402 1.012718869 1.013678978 0.788078977 1.092246099 0.991210811 0.974187473 1.070953852 1.041185253 1 10.30881623 YPGGS(ph)PIPADPR ddPTM_A459_MK2206_30min_R2 1 YPGGSPIPADPR 12 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 YPGGS(1)PIPADPR 90.434 0.026015 0 28137 29702 29213 25211 22359 23838 34918 26505 21398 32936 TRUE FALSE 30291.19035 28227.04187 30186.94684 23151.18065 21481.07332 24745.17179 30333.22466 29969.29451 23259.15936 31861.30102 0.950720447 0.885935005 0.947448656 0.726623833 0.67420578 0.776652899 0.952039737 0.940617412 0.730012856 1 14.95951756 -9.984560514 15.47280951 1.000016528 0.842832155 0.175013972 0.102458636 0 0 0.107392186 0.026046431 1.04E-10 9.984560514 -0.157184373 YPHVEDYR ddPTM_A459_MK2206_30min_R2 1 YPHVEDYR 8 0 A0A087WTV2;K9J957;P61289;P61289-3;P61289-2;B3KQ25;K7ESG5 A0A087WTV2 PSME3 Proteasome activator complex subunit 3 0 93.429 0.033827 3653200 14081 14127 15216 14351 11989 15093 15710 13074 13120 13891 FALSE TRUE 15159.05219 13425.47372 15723.29385 13178.47739 11518.25162 15667.37469 13647.25813 14782.81669 14261.15388 13437.73781 1.128095547 0.99908734 1.170084881 0.980706543 0.857157044 1.165923529 1.015591934 1.100097122 1.061276391 1 13.71400267 -2.803460649 0.004772127 0.130802159 2.00596944 0.022616442 0.091046131 342632.0338 158.8071427 29487.2356 33002.1144 0.001572314 2.803460649 1.875167281 YPHVEDYRR ddPTM_A459_MK2206_30min_R1 2 YPHVEDYRR 9 1 A0A087WTV2;K9J957;P61289;P61289-3;P61289-2;B3KQ25;K7ESG5 A0A087WTV2 PSME3 Proteasome activator complex subunit 3 0 ; 94.114 0.015973 7426000 2084.12 2415.51 1781.3 1973.32 2044.69 1479.83 1624.12 1547.24 722.44 843.38 FALSE TRUE 1906.85465 2258.25986 1660.390319 2125.305448 1963.245668 1563.616696 1515.777918 1533.712644 797.5402233 947.8642816 2.011738059 2.382471735 1.751717362 2.242204385 2.071230772 1.649620865 1.599150794 1.618071989 0.841407614 1 9.888536694 -7.677985041 0.752989408 0.917134992 2.122595817 0.800956972 0.211210285 0.275344599 0.295801112 0.186169347 0.090787283 2.10E-08 7.677985041 1.205460825 up YPIEHGIITNWDDMEK ddPTM_A459_MK2206_30min_R1 2 YPIEHGIITNWDDMEK 16 0 P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P68133 ACTA1;ACTC1;ACTG2;ACTA2 "Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle" 0 ; 131.96 0.00092633 890060000 17037.4 18404.3 18995.1 16430.3 15762.6 14691.1 16766.1 17746.2 15298.1 14888.4 FALSE TRUE 15588.27966 17206.17672 17705.76554 17695.76455 15134.74226 15522.89739 15647.66406 17591.04684 16888.39224 16732.88739 0.931595325 1.028284977 1.058141677 1.057543993 0.904490774 0.927687913 0.935144288 1.051285796 1.009293366 1 14.03039879 -3.73921821 14.83907989 0.990916215 0.997227613 0 0.057023083 0 0 0.014176301 0 0.000182298 3.73921821 0.006311398 YPIEHGIITNWDDMEK ddPTM_A459_MK2206_30min_R2 5 YPIEHGIITNWDDMEK 16 0 P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P68133 ACTA1;ACTC1;ACTG2;ACTA2 "Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle" 0 ;;;; 158.89 9.21E-05 188582300 411905 442400 410171 405262 402042 345208 467286 377552 357065 419833 FALSE TRUE 443440.7635 420431.0593 423845.8964 372150.7982 386255.811 358345.1323 405930.7869 426899.3427 388121.8683 406133.8836 1.091858575 1.03520311 1.043611266 0.916325412 0.95105537 0.882332518 0.999499927 1.05112959 0.955650055 1 18.63159587 -5.639400862 6.680430146 0.964844197 1.057490104 0.458846163 0.04586087 0.211030921 11.44562298 0.013519411 0.023561816 2.29E-06 5.639400862 0.092645908 YPPS(ph)PAK ddPTM_A459_MK2206_30min_R1 3 YPPSPAK 7 0 P30838;A8MYB8;I3L3I9 P30838 ALDH3A1 "Aldehyde dehydrogenase, dimeric NADP-preferring" 1 Y(0.006)PPS(0.994)PAK;Y(0.162)PPS(0.838)PAK;Y(0.017)PPS(0.983)PAK 92.051 0.02753 103360000 19258.1 20883.6 20866.8 17096.3 15848 13457.5 17526.4 16871.9 14143.2 15847.3 TRUE FALSE 17620.09747 19524.07384 19450.41975 18413.05999 15216.7406 14219.45202 16357.24583 16724.39076 15613.43625 17810.58317 0.989304915 1.096206321 1.092070909 1.0338269 0.854365096 0.79837094 0.918400351 0.939014214 0.876638126 1 14.12044713 -6.17347357 5.079428458 0.891072297 1.062130015 0.637739717 0.057196578 0.138520789 5.972370022 0.017410853 0.022651074 6.71E-07 6.17347357 0.171057718 YPPS(ph)PAK ddPTM_A459_MK2206_30min_R2 1 YPPSPAK 7 0 P30838;A8MYB8;I3L3I9 P30838 ALDH3A1 "Aldehyde dehydrogenase, dimeric NADP-preferring" 1 Y(0.001)PPS(0.999)PAK 81.972 0.04203 50018000 303850 343590 312350 316030 283020 247120 372140 268860 266140 349800 TRUE FALSE 327112.9896 326527.8202 322763.5931 290209.3381 271907.2127 256524.3248 323277.571 304000.9251 289288.3761 338386.0546 0.966685787 0.964956492 0.953832431 0.857627949 0.803541426 0.758081845 0.955351341 0.89838491 0.854906318 1 18.36831059 -5.730418847 6.436981253 0.866567562 0.963150615 0.261795831 0.065369833 0.228671587 28.61754653 0.018406656 0.031322514 1.86E-06 5.730418847 0.096583053 YPPYT(ph)TPPR ddPTM_A459_MK2206_30min_R2 1 YPPYTTPPR 9 0 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 YPPYT(0.716)T(0.284)PPR 97.565 0.04789 8186000 19665 26925 21019 25236 23806 25754 26544 22130 22178 22066 TRUE FALSE 21170.56752 25587.94365 21719.76297 23174.13807 22871.25682 26734.08652 23058.74091 25022.46698 24107.00235 21345.98823 0.991782029 1.198723778 1.017510304 1.08564372 1.071454579 1.252417374 1.080237685 1.172232774 1.129345809 1 14.38167733 YPS(ph)CESVTDEYAGHLIQILK ddPTM_A459_MK2206_30min_R1 1 YPSCESVTDEYAGHLIQILK 20 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 YPS(0.751)CES(0.137)VT(0.112)DEYAGHLIQILK 131.86 9.98E-05 9994600 2753.9 2776.5 2970.7 2571.7 2837.1 2717.4 2708.3 2731.2 2464 2547.9 TRUE FALSE 2519.666344 2595.749345 2769.057161 2769.77278 2724.092299 2871.25684 2527.634249 2707.321406 2720.141618 2863.553088 0.879909073 0.906478513 0.967000463 0.967250369 0.951297991 1.002690277 0.882691597 0.945441318 0.949918348 1 11.48359063 -5.092967665 3.616735821 0.95519616 0.883817107 0.410916192 0.031644338 0.234797623 5.544330715 0.008214188 0.028240467 8.07E-06 5.092967665 -0.071379053 YPSSIS(ph)SSPQK ddPTM_A459_MK2206_30min_R1 2 YPSSISSSPQK 11 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPSS(0.028)IS(0.351)S(0.351)S(0.27)PQK;YPS(0.004)S(0.08)IS(0.393)S(0.262)S(0.262)PQK 90.685 0.02806 24600000 4598.8 4669.95 5439.2 3784.5 3669.6 3585.32 4963.22 3802.5 6740.6 7877.5 TRUE FALSE 4207.647911 4365.935406 5070.002258 4075.982846 3523.432061 3788.31772 4632.13265 3769.255143 7441.309491 8853.424172 0.475256559 0.493135235 0.572660042 0.460384905 0.397973936 0.427892942 0.523202386 0.425739812 0.840500731 1 13.11201983 -8.397676423 3.443256094 0.994672638 0.473112288 0.928434641 0.05055102 0.056568124 1.179019019 0.051590302 0.013745062 4.00E-09 8.397676423 -0.52156035 down YPSSISS(ph)SPQK ddPTM_A459_MK2206_30min_R1 2 YPSSISSSPQK 11 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPSSIS(0.002)S(0.499)S(0.499)PQK;YPSSIS(0.001)S(0.499)S(0.499)PQK 202.61 1.83E-05 44995000 9494.6 10564 10820.5 7240.9 7131.7 7998.8 11436 7261.6 14952 18974.8 TRUE FALSE 8687.034412 9876.28168 10086.03461 7798.595373 6847.629287 8451.685144 10673.12531 7198.112597 16506.31391 21325.54148 0.407353521 0.463119855 0.472955616 0.365692725 0.321099902 0.396317493 0.500485548 0.33753481 0.774016169 1 14.38029475 -8.449026366 3.334191381 0.996784632 0.410697913 0.921190036 0.05772421 0.056012739 1.238241683 0.057925764 0.015387919 3.56E-09 8.449026366 -0.58608672 down YPSSISS(ph)SPQK ddPTM_A459_MK2206_30min_R2 1 YPSSISSSPQK 11 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPSSIS(0.002)S(0.499)S(0.499)PQK 166.24 0.0006064 32612000 109910 60775 82058 64485 62742 47716 103130 71716 44621 88424 TRUE FALSE 118324.7941 57757.00188 84793.77276 59216.36922 60278.43383 49531.86582 89588.90712 81089.52744 48502.05392 85538.73212 1.383289081 0.675214613 0.99129097 0.692275508 0.704691691 0.579057751 1.047349018 0.947986081 0.567018621 1 16.3842902 -4.753915849 24.90807518 0.799290737 1.383290169 0.505440369 0.172927918 215.3991262 713057.7826 0.042439579 0.434851853 1.76E-05 4.753915849 0.583999432 YPSSISS(ph)SPQKDLTQAK ddPTM_A459_MK2206_30min_R1 2 YPSSISSSPQKDLTQAK 17 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPS(0.008)S(0.04)IS(0.15)S(0.428)S(0.368)PQKDLT(0.006)QAK;YPSS(0.001)IS(0.004)S(0.811)S(0.183)PQKDLTQAK 96.012 0.0033897 160127000 9832.1 10200.6 11093.6 8746.9 8188.9 8063.8 9966.7 10610.1 10420.3 9930.7 TRUE FALSE 8995.828265 9536.539086 10340.59734 9420.587754 7862.718773 8520.365387 9301.839628 10517.33701 11503.52747 11160.99009 0.806006295 0.854452787 0.926494626 0.844063804 0.704482193 0.763405873 0.833424235 0.94233011 1.030690591 1 13.44617739 -7.888682272 2.822851853 1.011716393 0.817732308 0.682919917 0.055243314 0.180908554 2.8210279 0.043389177 0.017517495 1.29E-08 7.888682272 -0.193984084 YPSSISSS(ph)PQK ddPTM_A459_MK2206_30min_R1 1 YPSSISSSPQK 11 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPS(0.026)S(0.031)IS(0.145)S(0.104)S(0.695)PQK 91.313 0.026593 17291000 2986 2902.3 3121.3 2374.2 2269.5 2343.4 3298.1 1975.5 4256.2 5925.6 TRUE FALSE 2732.02502 2713.359742 2909.434852 2557.061295 2179.101009 2476.081283 3078.089767 1958.228412 4698.647221 6659.708064 0.410231949 0.407429232 0.43687123 0.383959968 0.327206687 0.371800274 0.462195901 0.294041179 0.705533512 1 12.70124322 -8.507362259 3.439313263 0.998418961 0.390044669 0.942186703 0.048830482 0.042411289 1.254808998 0.046690119 0.012343255 3.11E-09 8.507362259 -0.608374292 down YPSSISSS(ph)PQK ddPTM_A459_MK2206_30min_R2 3 YPSSISSSPQK 11 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPSSIS(0.01)S(0.283)S(0.706)PQK;YPS(0.065)S(0.038)IS(0.154)S(0.119)S(0.623)PQK;YPSSIS(0.044)S(0.026)S(0.93)PQK 158.34 0.00057195 195485000 279406 169771 206894 192358 145346 128556 245772 200214 119877 244354 TRUE FALSE 300797.5382 161340.419 213791.7427 176641.7361 139638.9857 133448.2887 213501.8412 226382.6572 130303.6848 236380.749 1.27251284 0.682544664 0.904438046 0.747276319 0.590737555 0.564548041 0.903211628 0.957703443 0.55124491 1 17.85075302 -4.756015003 24.99924287 0.76165714 1.272513645 0.474611747 0.159521157 154.6773125 712783.3887 0.039723278 0.334427406 1.75E-05 4.756015003 0.510856505 YPSSISSS(ph)PQKDLTQAK ddPTM_A459_MK2206_30min_R2 2 YPSSISSSPQKDLTQAK 17 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPS(0.007)S(0.01)IS(0.201)S(0.003)S(0.779)PQKDLTQAK;YPS(0.003)S(0.003)IS(0.015)S(0.449)S(0.523)PQKDLT(0.006)QAK 84.436 0.0067507 237250000 229682 240210 231443 273188 240101 164419 305362 223843 182164 287310 TRUE FALSE 247266.6305 228281.5207 239159.1941 250867.6665 230673.4283 170676.0803 265267.6026 253100.0487 198008.2954 277935.0982 0.88965601 0.821348301 0.86048576 0.902612402 0.829954294 0.614086099 0.954422829 0.910644428 0.712426378 1 18.08438851 -11.00178836 4.607807692 1.000656353 0.834719518 0.21403768 0.096031792 0.000650572 7.36E-05 0.093421669 0.022569558 9.96E-12 11.00178836 -0.165936835 YQAVTATLEEK ddPTM_A459_MK2206_30min_R1 1 YQAVTATLEEK 11 0 Q8J015;M0QYS1;P40429;Q6NVV1 Q8J015 RPL13a;RPL13A;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 0 145.23 0.036881 0 1453 1700.2 1531.4 1374 1248.2 1317.3 1415.6 1489.5 1178 1281.3 FALSE TRUE 1329.41472 1589.516671 1427.452835 1479.825718 1198.481551 1391.884388 1321.167907 1476.477459 1300.457316 1440.037117 0.923180871 1.10380257 0.99126114 1.027630261 0.832257403 0.966561466 0.917454065 1.02530514 0.90307208 1 10.49189028 YQDEVFGGFVT(ph)EPQEES(ph)EEEVEEPEER ddPTM_A459_MK2206_30min_R1 1 YQDEVFGGFVTEPQEESEEEVEEPEER 27 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 2 Y(0.003)QDEVFGGFVT(0.997)EPQEES(1)EEEVEEPEER 63.328 0.021973 0 346.12 441.82 541.34 304.26 541.58 449.47 401.28 695.11 317.47 264.36 TRUE FALSE 316.6806765 413.0574377 504.5953491 327.6941579 520.0077218 474.918603 374.5113434 689.0327266 350.4721426 297.1109126 1.065866863 1.390246605 1.698340006 1.102935449 1.750214145 1.598455603 1.260510225 2.319109455 1.17960037 1 8.214857785 -4.831734151 3.310507129 1.528333917 1.028163695 0.097278169 0.36926205 0.586427745 10.48103064 0.08836274 0.701787416 1.47E-05 4.831734151 -0.500170221 YQDEVFGGFVTEPQEES(ph)EEEVEEPEER ddPTM_A459_MK2206_30min_R1 13 YQDEVFGGFVTEPQEESEEEVEEPEER 27 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER 182.4 1.29E-26 697488200 46647.46 47750.15 46616.84 41189.17 49949.63 44393.97 48148.92 44760.08 39325.45 37237.88 TRUE FALSE 42679.84857 44641.60656 43452.61878 44361.56701 47960.03047 46907.51822 44936.9934 44368.74734 43413.47126 41851.18971 1.019800127 1.066674732 1.03826484 1.059983416 1.145965761 1.12081684 1.073732759 1.060154984 1.037329442 1 15.35298101 -1.523359445 21.3330586 1.067604501 0.000197995 0 0.042139124 0 0 0.010105965 0 0.029966813 1.523359445 -1.067406506 YQDEVFGGFVTEPQEES(ph)EEEVEEPEER ddPTM_A459_MK2206_30min_R2 9 YQDEVFGGFVTEPQEESEEEVEEPEER 27 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER 171.3 6.44E-22 106082600 363260.8 430904.8 372959.5 456691.7 464687.9 447745.7 447612.7 352722.5 406825.3 410452.7 TRUE FALSE 391072.3261 409506.6942 385393.7836 419378.5272 446441.9182 464784.9764 388840.6148 398824.5418 442210.2292 397059.662 0.984920816 1.031348015 0.970619331 1.056210357 1.124369864 1.170567098 0.979300221 1.004444873 1.1137123 1 18.59899628 -5.876520055 6.403531761 1.06856019 0.999622715 0.221142362 0.05867805 0.346325869 18.05643011 0.017597472 0.026361254 1.33E-06 5.876520055 -0.068937475 YQEDS(ph)DPERSDYEEQQLQK ddPTM_A459_MK2206_30min_R2 4 YQEDSDPERSDYEEQQLQK 19 1 Q6P6C2-3;Q6P6C2;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 Y(0.041)QEDS(0.955)DPERS(0.004)DYEEQQLQK;Y(0.333)QEDS(0.667)DPERSDYEEQQLQK;Y(0.009)QEDS(0.991)DPERSDYEEQQLQK;Y(0.04)QEDS(0.96)DPERSDYEEQQLQK 83.245 0.0025606 62812000 105964.4 81544.7 82716.5 95312.6 77594.2 75818.5 86828.5 82368.6 78714.9 86014 TRUE FALSE 114077.1159 77495.30878 85474.22683 87525.25569 74547.46183 78703.82615 75427.81365 93134.45883 85561.37972 83207.37022 1.370997733 0.931351496 1.027243459 1.051893065 0.895923782 0.945875659 0.906503997 1.1193054 1.028290877 1 16.3444237 -4.756095617 24.99998577 0.989559634 1.370998331 0.745424488 0.066866304 89.17195846 417132.81 0.017448317 0.145583674 1.75E-05 4.756095617 0.381438697 YQEQGGEAS(ph)PQR ddPTM_A459_MK2206_30min_R1 2 YQEQGGEASPQR 12 0 H0Y5J4;Q9UJU6-5;Q9UJU6 H0Y5J4 DBNL Drebrin-like protein 1 YQEQGGEAS(1)PQR;YQEQGGEAS(1)PQR 210.38 6.06E-06 55992000 6371.9 5991 5541.4 5136 6052.9 5118 6882.4 5381.6 5549.7 5764.9 TRUE FALSE 5829.936445 5600.984811 5165.265207 5531.57561 5811.800176 5407.776737 6423.287654 5334.549239 6126.611175 6479.099335 0.899806616 0.864469662 0.797219635 0.853756876 0.89700742 0.834649456 0.991385889 0.823347346 0.945596117 1 12.66157756 -8.84357113 0.373478887 1.013889034 0.849699662 0.403724223 0.051040391 2.133583497 0.662156829 0.111008364 0.044048078 1.43E-09 8.84357113 -0.164189372 YQEQGGEAS(ph)PQR ddPTM_A459_MK2206_30min_R2 2 YQEQGGEASPQR 12 0 H0Y5J4;Q9UJU6-5;Q9UJU6 H0Y5J4 DBNL Drebrin-like protein 1 YQEQGGEAS(1)PQR;YQEQGGEAS(1)PQR 127.3 0.0026128 96206000 25432 30327 27010 32990 27231 25910 30893 22497 21820.8 32445 TRUE FALSE 27379.09347 28821.00528 27910.49992 30294.61147 26161.77412 26896.02321 26836.71199 25437.43514 23718.73374 31386.32231 0.872325633 0.918266403 0.88925678 0.965216988 0.833540606 0.856934525 0.85504481 0.810462433 0.755702867 1 14.93784837 -6.290889716 24.38069089 0.842874864 0.91019434 0.17022467 0.062238103 791.6694692 655387.3432 0.018503353 0.020984465 5.12E-07 6.290889716 0.067319476 YQEQGGEAS(ph)PQSR ddPTM_A459_MK2206_30min_R1 2 YQEQGGEASPQSR 13 0 B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3;Q9UJU6-6 B4DDD6 DBNL Drebrin-like protein 1 YQEQGGEAS(0.997)PQS(0.003)R;YQEQGGEAS(0.996)PQS(0.004)R 201.3 9.74E-05 21684000 3251.7 3042 3289.1 2709 3386.3 2701.3 3515.8 3072.8 2492.9 2390.7 TRUE FALSE 2975.12584 2843.965247 3065.845056 2917.647649 3251.4165 2854.245272 3281.267397 3045.934834 2752.045876 2686.877965 1.107279854 1.058464614 1.141043656 1.085887669 1.210109481 1.062290625 1.221219363 1.133633486 1.024254139 1 11.39171508 -8.314743774 4.641348192 1.005170143 1.128071316 0.441397592 0.052090728 0.197073516 8.856984751 0.047500345 0.012848658 4.84E-09 8.314743774 0.122901173 YQEQGGEAS(ph)PQSR ddPTM_A459_MK2206_30min_R2 1 YQEQGGEASPQSR 13 0 B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3;Q9UJU6-6 B4DDD6 DBNL Drebrin-like protein 1 YQEQGGEAS(0.97)PQS(0.03)R 94.45 0.0158 12814000 10404 13796 10552 12829 13393 13488 14411 9121.1 9359.9 9521.8 TRUE FALSE 11200.53824 13110.9107 10903.79841 11780.82966 12867.12353 14001.29529 12518.81839 10313.25909 10174.00718 9211.104446 1.215982112 1.423380961 1.183766667 1.278981227 1.396914301 1.520045221 1.359100688 1.119654993 1.104537164 1 13.16915844 -7.828106376 4.386479696 1.071894904 1.344093452 0.614746766 0.096647587 0.155923761 5.807054424 0.059297139 0.027667893 1.49E-08 7.828106376 0.272198549 YQEQGGEASPQS(ph)R ddPTM_A459_MK2206_30min_R2 1 YQEQGGEASPQSR 13 0 B4DDD6;Q9UJU6-4;Q9UJU6-2;Q9UJU6-3;Q9UJU6-6 B4DDD6 DBNL Drebrin-like protein 1 YQEQGGEAS(0.201)PQS(0.799)R 164.66 0.00036264 18750000 20703 24135 20336 27575 24527 21020 20716 19721 18529 18611 TRUE FALSE 22288.0376 22936.491 21013.99209 25322.03429 23563.94674 21819.93083 17995.96432 22298.60241 20140.61893 18003.72459 1.237968148 1.273985884 1.167202485 1.40648865 1.308837325 1.211967597 0.999568963 1.238554961 1.118691792 1 14.13600778 -7.025121793 7.312070352 1.10822262 1.277877639 0.52251401 0.084842381 0.180031701 39.81597255 0.031841699 0.025505279 9.44E-08 7.025121793 0.169655019 YQES(ph)PGIQMK ddPTM_A459_MK2206_30min_R2 2 YQESPGIQMK 10 0 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 Y(0.003)QES(0.997)PGIQMK;Y(0.002)QES(0.998)PGIQMK 134.56 0.0020805 75365000 197354 210039 201128 213572 211064 182082 224416 164172 164989 216075 TRUE FALSE 212463.574 199608.7687 207833.5071 196122.4844 202776.5668 189011.2581 194949.9096 185629.8441 179339.445 209024.4904 1.016453017 0.954953978 0.994302183 0.938275147 0.970109131 0.904254127 0.932665398 0.888077008 0.857982931 1 17.67331246 -6.337666316 0.920165547 0.90795214 0.988998336 0.342241633 0.039695063 0.605754201 1.104122808 0.019198684 0.028276051 4.60E-07 6.337666316 0.081046197 YQPLAS(ph)TASDNDFVTPEPR ddPTM_A459_MK2206_30min_R2 2 YQPLASTASDNDFVTPEPR 19 0 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 YQPLAS(0.71)T(0.288)AS(0.002)DNDFVTPEPR;YQPLAS(0.498)T(0.498)AS(0.003)DNDFVTPEPR 303.76 1.50E-100 18754900 53761 68452 62869 64203 63525 71354 60978 45669 53495 59280 TRUE FALSE 57876.9835 65052.77322 64965.02108 58957.40952 61030.68931 74069.42647 52971.51535 51638.09511 58147.8984 57345.69845 1.009264601 1.134396737 1.132866507 1.028105178 1.064259238 1.291630034 0.923722559 0.900470244 1.013988843 1 15.80739765 YQPLAST(ph)ASDNDFVTPEPR ddPTM_A459_MK2206_30min_R1 2 YQPLASTASDNDFVTPEPR 19 0 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 YQPLAS(0.002)T(0.92)AS(0.077)DNDFVTPEPR;YQPLAS(0.033)T(0.948)AS(0.019)DNDFVTPEPR 228.19 3.69E-23 45485800 3884.5 4116.4 4177.7 3265 3813.8 3542 4383.9 3734 3737.8 3023 TRUE FALSE 3554.102877 3848.421612 3894.129364 3516.470866 3661.88827 3742.544979 4091.45803 3701.354032 4126.357686 3397.512062 1.046089848 1.132717571 1.146170872 1.035013504 1.077814649 1.101554582 1.204251215 1.089430726 1.214523336 1 11.73026296 -7.020436601 24.52334397 1.137132313 1.090334517 0.067834362 0.064547505 1401.097595 1681274.543 0.023185516 0.018182582 9.54E-08 7.020436601 -0.046797795 YQPLAST(ph)ASDNDFVTPEPR ddPTM_A459_MK2206_30min_R2 1 YQPLASTASDNDFVTPEPR 19 0 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 YQPLAS(0.004)T(0.546)AS(0.002)DNDFVT(0.448)PEPR 245.74 1.76E-30 4877300 18537 20854 16581 20862 18007 22800 21091 14346 16378 15864 TRUE FALSE 19956.20697 19818.42068 17133.80226 19157.50787 17299.9547 23667.66998 18321.72637 16221.07146 17802.52884 15346.35898 1.300387082 1.291408647 1.116473444 1.248342222 1.127300275 1.542233569 1.193880997 1.056998046 1.160049029 1 13.90560879 -7.568807177 6.355338248 1.087261014 1.266130463 0.368019749 0.115777346 0.237389157 23.07908399 0.055550064 0.031948695 2.70E-08 7.568807177 0.178869449 YQPLASTAS(ph)DNDFVTPEPR ddPTM_A459_MK2206_30min_R1 4 YQPLASTASDNDFVTPEPR 19 0 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 YQPLAS(0.006)T(0.159)AS(0.833)DNDFVT(0.001)PEPR;YQPLAS(0.002)T(0.179)AS(0.819)DNDFVTPEPR;YQPLAST(0.001)AS(0.998)DNDFVT(0.001)PEPR;YQPLAS(0.001)T(0.025)AS(0.974)DNDFVTPEPR 211.11 1.30E-16 39551000 4135 3449.43 3584.16 3414.36 3756.06 3109.92 3782.88 3832.37 3369.67 3062.43 TRUE FALSE 3783.296536 3224.87148 3340.877205 3677.334599 3606.448177 3286.000983 3530.530977 3798.863993 3719.959255 3441.826949 1.099211725 0.936965027 0.970669721 1.068425186 1.047829606 0.954725799 1.025772367 1.103734746 1.080809498 1 11.74895885 -7.574646399 8.679307832 1.068617025 1.009928769 0.135395511 0.053696758 0.497101557 76.14670008 0.025265265 0.014560383 2.66E-08 7.574646399 -0.058688256 YQPLASTAS(ph)DNDFVTPEPR ddPTM_A459_MK2206_30min_R2 3 YQPLASTASDNDFVTPEPR 19 0 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 YQPLAS(0.035)T(0.035)AS(0.93)DNDFVTPEPR;YQPLAST(0.007)AS(0.993)DNDFVTPEPR;YQPLAS(0.008)T(0.19)AS(0.803)DNDFVTPEPR 181.14 4.18E-13 17588200 76011.4 86647 76122.4 83288.6 85281 78889.7 77807.7 60333.8 71828.1 75375.8 TRUE FALSE 81830.89123 82344.23598 78660.28282 76483.65495 81932.43944 81891.90281 67591.45553 68219.63482 78075.5783 72916.29382 1.122257961 1.129298154 1.078775109 1.04892406 1.123650629 1.123094696 0.926973273 0.935588347 1.070756263 1 16.15395361 -7.252744858 24.9900212 0.977961832 1.102665903 0.649388246 0.043475985 395.709409 1137359.786 0.017247399 0.013151436 5.59E-08 7.252744858 0.12470407 YQPLASTASDNDFVT(ph)PEPR ddPTM_A459_MK2206_30min_R1 3 YQPLASTASDNDFVTPEPR 19 0 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 YQPLASTASDNDFVT(1)PEPR;YQPLASTAS(0.001)DNDFVT(0.999)PEPR;YQPLASTASDNDFVT(1)PEPR 339.46 2.85E-173 30893000 5741.74 4915.76 4819.96 3921.54 4594.47 3958.67 4858.25 4396.63 3591.9 3142.65 TRUE FALSE 5253.374862 4595.743131 4492.794544 4223.57769 4411.462531 4182.806474 4534.165007 4358.190727 3965.290859 3531.985208 1.487371705 1.301178476 1.272030963 1.195808431 1.249003682 1.184265003 1.283744053 1.233921002 1.122680483 1 11.78626359 -1.522878745 0.064926566 0.72503647 2.364741728 0.733124224 0.061976163 172.2844539 0.834258718 3.972315357 26.22548708 0.03 1.522878745 1.639705258 YQPLASTASDNDFVT(ph)PEPR ddPTM_A459_MK2206_30min_R2 3 YQPLASTASDNDFVTPEPR 19 0 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 YQPLASTASDNDFVT(1)PEPR;YQPLASTAS(0.007)DNDFVT(0.993)PEPR;YQPLAST(0.001)AS(0.151)DNDFVT(0.848)PEPR 147.49 9.58E-05 16892600 67440 64808 60524 76719 75889 77343 69568 52830 57510 69137 TRUE FALSE 72603.25825 61589.72896 62541.83995 70450.81229 72909.21655 80286.34206 60433.63803 59735.06239 62512.11585 66881.06535 1.085557741 0.920884388 0.935120271 1.053374553 1.090132404 1.200434557 0.903598615 0.893153572 0.934675839 1 16.02931021 YQQETSVSQLPGRPKS(ph)PLSK ddPTM_A459_MK2206_30min_R1 1 YQQETSVSQLPGRPKSPLSK 20 2 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 YQQETSVS(0.001)QLPGRPKS(0.897)PLS(0.102)K 70.593 0.012173 25207000 1281.6 1635.2 1890 1865.3 1868.6 1618.1 1512.3 1930.6 1228.5 882.73 TRUE FALSE 1172.59319 1528.748183 1761.712066 2008.965729 1794.169705 1709.715424 1411.417226 1913.720968 1356.206971 992.0892567 1.18194324 1.540938149 1.775759645 2.024984865 1.808476095 1.72334839 1.422671616 1.928980638 1.367021124 1 9.954326113 -8.533840973 5.722618398 1.000175783 1.682900915 0.455793659 0.232966136 0.126850029 22.56331177 0.234205639 0.060751193 2.93E-09 8.533840973 0.682725132 YQQETSVSQLPGRPKS(ph)PLSK ddPTM_A459_MK2206_30min_R2 2 YQQETSVSQLPGRPKSPLSK 20 2 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 YQQETSVSQLPGRPKS(0.826)PLS(0.174)K;YQQETSVSQLPGRPKS(0.856)PLS(0.144)K 86.573 0.00088109 80064000 102272 207736 193351 177135 200657 156035 186503 153732 189657 149854 TRUE FALSE 110102.023 197420.1323 199797.2258 162662.5039 192778.198 161973.0213 162014.9321 173825.3002 206153.023 144964.2763 0.759511418 1.361853675 1.378251463 1.122086821 1.329832445 1.117330597 1.117619708 1.199090595 1.422095349 1 17.14533789 -4.7515853 24.98750809 1.231521674 0.759510461 0.526579278 0.133094996 318.2897839 807048.1668 0.032468851 0.422753946 1.77E-05 4.7515853 -0.472011212 YQQIT(ph)PVNQSR ddPTM_A459_MK2206_30min_R1 2 YQQITPVNQSR 11 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 Y(0.001)QQIT(0.999)PVNQSR;YQQIT(0.999)PVNQS(0.001)R 164.22 0.0015164 14797300 4983.3 4790.5 5334 4962.5 5303.4 4661.6 4942.2 4307.7 3441.1 3298.5 TRUE FALSE 4559.444167 4478.637579 4971.942941 5344.71261 5092.154348 4925.535764 4612.514856 4270.038233 3798.814659 3707.143082 1.229907793 1.208110256 1.341179132 1.441733564 1.373606099 1.328660819 1.244223585 1.151840687 1.024728362 1 11.85609208 -7.925432985 1.539613713 1.000479829 1.323957048 0.788572334 0.063244192 0.20641065 0.886954721 0.063143827 0.021973498 1.19E-08 7.925432985 0.323477219 YQQIT(ph)PVNQSR ddPTM_A459_MK2206_30min_R2 3 YQQITPVNQSR 11 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 Y(0.05)QQIT(0.932)PVNQS(0.018)R;Y(0.004)QQIT(0.622)PVNQS(0.374)R;Y(0.006)QQIT(0.601)PVNQS(0.394)R 122.1 0.0099405 21515100 85814 105130 87995 99617 86664 105206 84272 76006 75975 77181 TRUE FALSE 92383.98582 99909.39707 90928.70938 91477.97244 83261.13591 109209.6881 73206.98517 85940.24517 82583.16817 74662.59029 1.237353077 1.338145337 1.217861703 1.225218307 1.11516538 1.462709606 0.980504224 1.151048267 1.10608496 1 16.18809794 -7.811693845 0.620235823 1.008568494 1.266134372 0.361857264 0.111348371 0.822503944 0.660811404 0.104301141 0.056022852 1.54E-08 7.811693845 0.257565878 YQQITPVNQS(ph)R ddPTM_A459_MK2206_30min_R2 2 YQQITPVNQSR 11 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 YQQITPVNQS(1)R;YQQITPVNQS(1)R 149.82 0.00062438 43312000 78518 99860 97106 100528 123437 100225 89425 69406 93927 85231 TRUE FALSE 84529.39845 94901.09761 100343.4656 92314.54083 118590.2432 104039.1326 77683.39008 78477.60251 102096.6007 82449.91945 1.025221116 1.151015043 1.217023209 1.119643796 1.438330613 1.261846383 0.942188793 0.951821458 1.238286239 1 16.33123046 -7.255011822 24.9151032 1.029059243 1.207511508 0.301319737 0.125934556 639.3635797 2478367.932 0.051047335 0.038552894 5.56E-08 7.255011822 0.178452265 YQT(ph)QPVTLGEVEQVQSGK ddPTM_A459_MK2206_30min_R1 1 YQTQPVTLGEVEQVQSGK 18 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 YQT(0.996)QPVT(0.004)LGEVEQVQSGK 268.49 1.58E-53 9192700 1611.3 1702.8 1851 2360.6 1924.4 1265.9 1771.3 2065.3 1613.5 1100.5 TRUE FALSE 1474.250474 1591.947411 1725.359277 2542.413821 1847.747073 1337.574164 1653.139809 2047.2433 1781.229099 1236.838248 1.191950908 1.287110431 1.394975681 2.055575031 1.493927824 1.081446313 1.33658529 1.655223149 1.440147167 1 10.27244112 -6.57572796 24.99996727 1.33929921 1.501279641 0.090515247 0.274170441 304.4235373 144003.3224 0.097212544 0.097212559 2.66E-07 6.57572796 0.161980431 YQT(ph)QPVTLGEVEQVQSGK ddPTM_A459_MK2206_30min_R2 1 YQTQPVTLGEVEQVQSGK 18 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 YQT(0.643)QPVT(0.356)LGEVEQVQS(0.001)GK 126.14 0.0018507 6199100 28836 53218 56900 28403 52600 48329 26943 30711 51624 33726 TRUE FALSE 31043.70633 50575.27151 58797.0176 26082.38404 50534.65971 50168.19396 23405.35174 34725.03315 56114.16221 32625.52338 0.951515964 1.550175024 1.802178525 0.799447222 1.548930238 1.537697752 0.717393908 1.064351757 1.719946728 1 14.99371343 YQTQPVT(ph)LGEVEQVQSGK ddPTM_A459_MK2206_30min_R1 1 YQTQPVTLGEVEQVQSGK 18 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 YQT(0.013)QPVT(0.987)LGEVEQVQSGK 152.89 0.00019468 17039000 2923.8 2527.7 3353.9 3956.5 3393.1 2763.3 3630.6 3780.8 3141.1 2389.5 TRUE FALSE 2675.115457 2363.146271 3126.246613 4261.230316 3257.945642 2919.755658 3388.409298 3747.744864 3467.628586 2685.5293 0.996122238 0.879955497 1.164108175 1.5867376 1.213148426 1.087217949 1.261728665 1.395533039 1.29122724 1 11.39099075 -5.42374814 4.97255764 1.276324118 0.944942315 0.405969624 0.153483323 0.20335213 7.864726056 0.040986052 0.087560259 3.77E-06 5.42374814 -0.331381803 YQTQPVT(ph)LGEVEQVQSGK ddPTM_A459_MK2206_30min_R2 1 YQTQPVTLGEVEQVQSGK 18 0 O95425-3;O95425;A0A6I8PIX7;O95425-4 O95425-3;O95425-4 SVIL Supervillin 1 YQT(0.363)QPVT(0.636)LGEVEQVQSGK 94.325 0.010007 7687100 10147 19615 19260 12881 18306 15655 10165 9248.5 16661 12672 TRUE FALSE 10923.86212 18640.94762 19902.11879 11828.5811 17587.21446 16250.76199 8830.32329 10457.3107 18110.14366 12258.51368 0.89112452 1.520653165 1.623534411 0.964927838 1.434693873 1.325671482 0.720342084 0.853065141 1.477352323 1 13.58149645 -7.216884039 24.79675186 1.000445184 1.310255793 0.193133468 0.279405571 628.2420285 349640.9941 0.106363577 0.082388524 6.07E-08 7.216884039 0.309810609 YQVS(ph)DGSLTVTSVSR ddPTM_A459_MK2206_30min_R1 1 YQVSDGSLTVTSVSR 15 0 H0YDP1;Q9UPX0;Q9UPX0-2 H0YDP1 IGSF9B Protein turtle homolog B 1 YQVS(0.325)DGS(0.325)LT(0.325)VT(0.025)SVSR 110.25 0.0035464 128400000 169.85 63.364 0 0 63.8 0 69.613 0 0 54.392 TRUE FALSE 155.4033656 59.23899208 0 0 61.2587109 0 64.96924379 0 0 61.1304916 2.542157956 0.969058003 0 0 1.002097469 0 1.06279603 0 0 1 5.933820264 -4.810657045 2.986847101 0.368722069 2.824122991 0.680984347 0.44512465 0.193389129 2.605948679 0.109973546 1.11389529 1.55E-05 4.810657045 2.455400922 YQVS(ph)DGSLTVTSVSR ddPTM_A459_MK2206_30min_R2 3 YQVSDGSLTVTSVSR 15 0 H0YDP1;Q9UPX0;Q9UPX0-2 H0YDP1 IGSF9B Protein turtle homolog B 1 YQVS(0.483)DGS(0.248)LT(0.248)VT(0.021)SVSR;YQVS(0.65)DGS(0.307)LT(0.032)VT(0.01)SVSR;YQVS(0.681)DGS(0.31)LT(0.008)VT(0.001)SVSR 134.37 0.00045661 106283300 1120.2 633.58 2203.2 7836.6 735.84 561.15 3791.86 456.41 769.87 3230.2 TRUE FALSE 1205.963373 602.1173385 2276.653588 7196.324712 706.9472243 582.5049565 3293.984227 516.0643541 836.831901 3124.798839 0.385933123 0.192689952 0.728576048 2.302972154 0.226237675 0.186413586 1.05414281 0.165151224 0.267803447 1 11.6095476 YQVSDGS(ph)LTVTSVSR ddPTM_A459_MK2206_30min_R2 1 YQVSDGSLTVTSVSR 15 0 H0YDP1;Q9UPX0;Q9UPX0-2 H0YDP1 IGSF9B Protein turtle homolog B 1 YQVS(0.278)DGS(0.704)LT(0.013)VT(0.004)SVSR 88.78 0.017274 3369100 0 1428.9 0 975.78 1120 681.06 0 819.83 1312.6 0 TRUE FALSE 0 1357.942904 0 896.0556526 1076.023172 706.9782155 0 926.9845959 1426.767575 0 0 YQYGGLNSGRPVT(ph)PPR ddPTM_A459_MK2206_30min_R2 1 YQYGGLNSGRPVTPPR 16 1 P62140 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit 1 YQYGGLNSGRPVT(1)PPR 89.468 0.018177 203880000 51745 63745 58279 53178 73651 58451 64286 48439 60437 63204 TRUE FALSE 55706.63699 60579.51599 60221.99277 48833.18729 70759.09167 60675.39376 55845.17098 54770.14362 65693.70101 61141.65866 0.911107716 0.990805898 0.984958441 0.798689279 1.157297548 0.992374023 0.913373504 0.895790936 1.07445075 1 15.89986807 -6.243807624 24.99112572 0.99506996 0.930889197 0.17844633 0.085768843 1989.990063 2820597.817 0.026095871 0.033621248 5.70E-07 6.243807624 -0.064180764 YREPPPT(ph)PPGYLGISLADLK ddPTM_A459_MK2206_30min_R1 1 YREPPPTPPGYLGISLADLK 20 1 E9PCH4;Q8TEU7;A0A5F9ZHG7;Q8TEU7-4 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 Y(0.02)REPPPT(0.979)PPGYLGISLADLK 71.678 0.013134 10733000 5172.5 5435.9 5561.3 4345.1 4906.7 4483.2 4516.4 4827.9 4309.3 3452.1 TRUE FALSE 4732.551713 5082.021922 5183.814451 4679.760355 4711.255749 4737.03491 4215.119197 4785.690179 4757.267156 3879.77221 1.219801436 1.309876366 1.336113094 1.206194617 1.214312463 1.220956967 1.08643471 1.233497721 1.226171769 1 11.92175624 -14.52287874 0.104675928 0.272879127 1.370737907 0.617658153 0.057373473 122.2773842 0.858504098 19.23385934 0.883687574 3.00E-15 14.52287874 1.09785878 YREPPPT(ph)PPGYLGISLADLK ddPTM_A459_MK2206_30min_R2 1 YREPPPTPPGYLGISLADLK 20 1 E9PCH4;Q8TEU7;A0A5F9ZHG7;Q8TEU7-4 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 Y(0.074)REPPPT(0.925)PPGYLGISLADLK 60.561 0.040159 2805900 12841 11281 11434 11741 15415 12344 14943 10215 12507 12782 TRUE FALSE 13824.11683 10720.80194 11815.20385 10781.72274 14809.72965 12813.75957 12980.96615 11550.13557 13594.83625 12364.92439 1.118010624 0.867033361 0.955541941 0.871960265 1.197721004 1.036299064 1.049821717 0.934104828 1.099467803 1 13.5939658 -6.229297807 24.99975661 1.048623526 0.94715815 0.224202145 0.090433896 1011.649607 786862.1879 0.026074233 0.033659254 5.90E-07 6.229297807 -0.101465376 YREYS(ph)PPYAPSHQQYPPSHATPLPK ddPTM_A459_MK2206_30min_R2 1 YREYSPPYAPSHQQYPPSHATPLPK 25 1 Q9UPT8 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 Y(0.283)REY(0.283)S(0.321)PPY(0.078)APS(0.032)HQQY(0.001)PPSHATPLPK 46.818 0.024398 14602000 22337 32710 20485 33671 39631 43323 36232 25391 34591 25655 TRUE FALSE 24047.13789 31085.66896 21167.95968 30919.97159 38074.88781 44971.68712 31474.69488 28709.69088 37599.66265 24817.87945 0.968944101 1.252551372 0.852931844 1.24587484 1.53417168 1.812068078 1.2682266 1.156814825 1.51502318 1 14.59909223 -5.988760971 8.760175416 1.403607359 1.047302599 0.322331623 0.229018499 0.192032492 110.3397651 0.06620135 0.096094774 1.03E-06 5.988760971 -0.35630476 YREYSPPYAPS(ph)HQQYPPSHATPLPK ddPTM_A459_MK2206_30min_R2 1 YREYSPPYAPSHQQYPPSHATPLPK 25 1 Q9UPT8 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 Y(0.043)REY(0.025)S(0.13)PPY(0.025)APS(0.679)HQQY(0.093)PPS(0.003)HAT(0.002)PLPK 44.863 0.029393 7705100 10277 29378 24233 33040 34506 34490 30272 23027 29611 26322 TRUE FALSE 11063.81502 27919.13124 25040.91613 30340.52631 33151.12106 35802.54112 26297.25004 26036.70796 32186.51126 25463.1153 0.434503591 1.096453867 0.983419186 1.191548087 1.301927147 1.406055021 1.03275855 1.022526414 1.264044516 1 14.63612132 -4.619767117 2.12767948 1.163959099 7.93E-20 0.705320824 0.137290322 0.721340695 2.480128979 0.038201673 1.887439554 2.40E-05 4.619767117 -1.163959099 down YRLS(ph)PTLSSTK ddPTM_A459_MK2206_30min_R2 1 YRLSPTLSSTK 11 1 Q8NEM0-2;Q8NEM0-3;Q8NEM0 Q8NEM0-2 MCPH1 Microcephalin 1 Y(0.001)RLS(0.997)PT(0.002)LSSTK 69.721 0.037566 21004000 64831 67470 65791 74577 73718 62800 91779 56350 56454 71804 TRUE FALSE 69794.51121 64119.53791 67984.4391 68483.82054 70823.46092 65189.89801 79728.30705 63715.13848 61364.26687 69461.04136 1.004800818 0.923100729 0.978742008 0.985931383 1.019614154 0.938510231 1.147813299 0.917278769 0.883434306 1 16.08391642 -4.453700721 21.80224089 0.979384292 1.823941871 0.01312449 0.069539256 1333.054347 764086.4934 0.016783865 44879.42381 3.52E-05 4.453700721 0.844557579 YRNEGS(ph)PSPR ddPTM_A459_MK2206_30min_R2 1 YRNEGSPSPR 10 1 Q5T200;Q5T200-2 Q5T200;Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 YRNEGS(0.999)PS(0.001)PR 158.08 0.0022851 9560400 46025 52312 44395 60640 57074 60472 63740 46852 50735 58859 TRUE FALSE 49548.70939 49714.26215 45875.10714 55685.51802 54832.98799 62773.30433 55370.86143 52975.71727 55147.83859 56938.43565 0.870215502 0.873123077 0.805696655 0.977995222 0.963022383 1.1024768 0.972468962 0.930403455 0.96855205 1 15.79711524 -5.81011233 8.477243347 0.988360332 0.8521674 0.658066655 0.045634797 0.170341381 26.9710416 0.013715764 0.020496041 1.55E-06 5.81011233 -0.136192932 YRPAS(ph)ASVSALIGGR ddPTM_A459_MK2206_30min_R1 1 YRPASASVSALIGGR 15 1 P46108-2 P46108-2 CRK Adapter molecule crk 1 YRPAS(0.91)AS(0.084)VS(0.005)ALIGGR 151.11 0.0012001 108280000 2506 2910.3 2698.2 2496.2 2553.3 3143.1 2233.1 2414.4 1958.2 1878.9 TRUE FALSE 2292.85154 2720.838941 2515.053702 2688.457757 2451.596654 3321.059606 2084.133974 2393.291155 2161.761897 2111.672317 1.085798929 1.288475925 1.191024612 1.273141545 1.160973999 1.572715416 0.986958988 1.133362945 1.023720338 1 11.04417026 YRS(ph)DIHTEAVQAALAK ddPTM_A459_MK2206_30min_R1 2 YRSDIHTEAVQAALAK 16 1 Q9P265 Q9P265 DIP2B Disco-interacting protein 2 homolog B 1 YRS(0.964)DIHT(0.036)EAVQAALAK;Y(0.405)RS(0.594)DIHT(0.001)EAVQAALAK 156.13 0.001115 20632000 8833.13 9298.15 10313.7 8203.91 8246.24 6200.08 7506.84 9163.2 7321.39 6890 TRUE FALSE 8081.825909 8692.838745 9613.63478 8835.77657 7917.774799 6551.123172 7006.072401 9083.087108 8082.47469 7743.585217 1.043680115 1.122585792 1.241496608 1.141044661 1.022494694 0.846006467 0.904758223 1.172982133 1.043763898 1 12.91878596 -6.304303468 4.788783902 0.993098408 1.144114763 0.354161267 0.092067459 0.249803024 13.63023066 0.03188283 0.037206827 4.96E-07 6.304303468 0.151016355 YRS(ph)DIHTEAVQAALAK ddPTM_A459_MK2206_30min_R2 2 YRSDIHTEAVQAALAK 16 1 Q9P265 Q9P265 DIP2B Disco-interacting protein 2 homolog B 1 Y(0.427)RS(0.571)DIHT(0.002)EAVQAALAK;Y(0.413)RS(0.586)DIHT(0.002)EAVQAALAK 111.07 0.0014766 46575000 184465 223693 199252 229135 245880 239360 286390 210212 245660 222167 TRUE FALSE 198587.7822 212584.7309 205894.9622 210413.9375 236225.5158 248469.0125 248786.649 237687.4302 267027.0627 214917.709 0.92401777 0.989144784 0.958017667 0.979044205 1.099144025 1.156112326 1.157590271 1.105946231 1.242461889 1 17.71342484 -6.311785577 2.763489621 1.140321027 0.960256027 0.658032251 0.058404801 0.156588345 2.366452209 0.017973355 0.021803713 4.88E-07 6.311785577 -0.180065 YRS(ph)DVHTEAVQAALAK ddPTM_A459_MK2206_30min_R1 1 YRSDVHTEAVQAALAK 16 1 E7EPU2;A0A0U1RQW6;Q9Y2E4 E7EPU2 DIP2C Disco-interacting protein 2 homolog C 1 Y(0.43)RS(0.558)DVHT(0.012)EAVQAALAK 74.853 0.017468 7593600 3518.5 3537.1 3981.1 3309.7 4001.3 3067 3371.3 3659.6 3439.4 2946.6 TRUE FALSE 3219.233099 3306.834147 3710.874024 3564.613667 3841.919748 3240.65089 3146.406728 3627.604503 3796.937938 3311.647054 0.972094262 0.998546673 1.120552391 1.076386949 1.160123554 0.978561676 0.95010328 1.095407948 1.146540642 1 11.69333321 -5.076961478 6.696685963 1.065752173 0.978263496 0.192954763 0.066915438 0.370416635 26.74467516 0.018093935 0.049639402 8.38E-06 5.076961478 -0.087488677 YRS(ph)DVHTEAVQAALAK ddPTM_A459_MK2206_30min_R2 1 YRSDVHTEAVQAALAK 16 1 E7EPU2;A0A0U1RQW6;Q9Y2E4 E7EPU2 DIP2C Disco-interacting protein 2 homolog C 1 Y(0.409)RS(0.586)DVHT(0.004)EAVQAALAK 125.73 0.0018491 0 36805 46044 46804 46161 45018 35210 49985 39706 44716 44394 TRUE FALSE 39622.8191 43757.52191 48364.422 42389.49864 43250.36712 36549.94122 43421.90946 44895.71053 48605.31685 42945.42742 0.922631849 1.018909918 1.126183273 0.987054995 1.007100633 0.851078763 1.011095059 1.045413056 1.131792598 1 15.39021691 -7.79488816 3.752338531 1.070635349 0.990263523 0.166315918 0.072581639 0.415069353 12.23298971 0.044267442 0.020784519 1.60E-08 7.79488816 -0.080371826 YRS(ph)PEPDPYLSYR ddPTM_A459_MK2206_30min_R1 4 YRSPEPDPYLSYR 13 1 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 1 Y(0.002)RS(0.998)PEPDPYLSYR;Y(0.051)RS(0.949)PEPDPYLSYR;Y(0.003)RS(0.995)PEPDPYLS(0.002)YR;Y(0.008)RS(0.992)PEPDPYLSYR 150.14 0.00027522 155472500 9963.5 9793.9 9750.9 8217.9 10534.2 9402.4 11033.3 9575.4 7790.2 7693.6 TRUE FALSE 9116.052005 9156.31533 9089.036076 8850.844082 10114.60051 9934.755763 10297.28869 9491.683287 8600.019168 8646.741252 1.054276026 1.0589325 1.05115162 1.023604596 1.169758665 1.14895953 1.190886646 1.097717974 0.994596567 1 13.0779408 -6.241485246 24.86700692 1.11216612 1.048141309 0.135181136 0.061842837 1338.7363 1668344.494 0.018802102 0.024240171 5.73E-07 6.241485246 -0.064024811 YRS(ph)PEPDPYLSYR ddPTM_A459_MK2206_30min_R2 2 YRSPEPDPYLSYR 13 1 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 1 Y(0.098)RS(0.902)PEPDPYLSYR;Y(0.42)RS(0.58)PEPDPYLSYR 97.463 0.0073413 40862000 32164 39847 39188 42933 41206 43134 45272 33811 34449 44552 TRUE FALSE 34626.50057 37868.25592 40494.50836 39425.23656 39588.0454 44775.4946 39327.73202 38230.21379 37445.31175 43098.27189 0.803431299 0.878649056 0.939585431 0.914775346 0.918552964 1.03891624 0.912512969 0.887047487 0.868835573 1 15.3953424 -4.839459441 1.946821972 0.93310686 0.772869405 0.421795487 0.048013468 0.706432163 3.205825837 0.013568099 0.198346896 1.45E-05 4.839459441 -0.160237455 YRS(ph)PYSGPK ddPTM_A459_MK2206_30min_R1 3 YRSPYSGPK 9 1 G3XAC6;Q14498-2;Q14498;Q5QP23;Q5QP22 G3XAC6 RBM39 RNA-binding protein 39 1 YRS(0.999)PYS(0.001)GPK;YRS(1)PYSGPK;Y(0.001)RS(0.999)PYSGPK 147.58 0.0077097 1366540000 28033.4 31272.1 30925.1 25893.4 28826.9 25283.7 29106.7 27556.5 26085.9 22604.8 TRUE FALSE 25649.01212 29236.28061 28825.99037 27887.71415 27678.66353 26715.24124 27165.04515 27315.57643 28797.62265 25405.25328 1.00959482 1.150796659 1.134646841 1.097714471 1.089485833 1.051563665 1.069268818 1.075194021 1.133530232 1 14.63283923 -6.46828758 3.470291134 1.070738128 1.104287458 0.088529896 0.046337912 0.605215568 14.56289138 0.015084707 0.016621366 3.40E-07 6.46828758 0.03354933 YRS(ph)PYSGPK ddPTM_A459_MK2206_30min_R2 3 YRSPYSGPK 9 1 G3XAC6;Q14498-2;Q14498;Q5QP23;Q5QP22 G3XAC6 RBM39 RNA-binding protein 39 1 Y(0.002)RS(0.998)PYSGPK;YRS(1)PYSGPK;YRS(1)PYSGPK 126.66 0.022554 3344190000 199501 237590 207031 226712 214416 185952 250990 196083 169483 204833 TRUE FALSE 214774.95 225791.6261 213933.3102 208188.9044 205996.9505 193028.5337 218034.7115 221711.7214 184224.325 198149.316 1.083904574 1.139502425 1.079657071 1.050666783 1.039604651 0.974156952 1.10035561 1.118912373 0.929724759 1 17.59622846 -1.522878748 0.186063191 0.999158557 1.52501146 0.272740553 0.05401902 82.47817208 0.950609825 0.118464465 12.37646747 0.03 1.522878748 0.525852903 YRTEAHQDVVGR ddPTM_A459_MK2206_30min_R1 1 YRTEAHQDVVGR 12 1 A0A087WV29;Q9H0A0-2;Q9H0A0;E9PMU0 A0A087WV29 NAT10 N-acetyltransferase 10 0 80.014 0.032613 1496100 1050.6 1150.6 1235.1 1223.5 1396.3 1548.5 1375.2 1565.6 1125.9 937.28 FALSE TRUE 961.2409531 1075.695731 1151.264853 1317.734182 1340.682414 1636.174732 1283.462917 1551.912124 1242.941334 1053.397323 0.912515091 1.021168089 1.092906569 1.25093747 1.272722444 1.553236084 1.218403436 1.473244797 1.179935915 1 10.04083398 -5.565986471 1.472551681 1.316479025 0.938056648 0.427414941 0.146356762 0.376730032 1.556452332 0.043920101 0.13420855 2.72E-06 5.565986471 -0.378422377 YRVVY(ph)Y(ph)PT(ph)RGGK ddPTM_A459_MK2206_30min_R1 1 YRVVYYPTRGGK 12 2 H0YBB2;Q4G0W3;J3QT83;Q05707-3;Q05707-2;Q05707 H0YBB2 COL14A1 Collagen alpha-1(XIV) chain 3 YRVVY(1)Y(1)PT(1)RGGK 100.38 0.0082367 0 2178.5 2364.8 2730.3 2175.6 1794.1 1514.4 2179.3 2236.8 1578.1 3276.6 TRUE FALSE 1993.207135 2210.85109 2544.974843 2343.165089 1722.637198 1600.144019 2033.922873 2217.243893 1742.149142 3682.529945 0.541260265 0.600362013 0.691094134 0.636292202 0.467786338 0.434523016 0.552316723 0.602097994 0.473084854 1 11.84648154 -10.63064087 4.65590615 1.000029177 0.558262501 0.752431972 0.076487811 120703247 72387630.88 43363.66642 0.02114899 2.34E-11 10.63064087 -0.441766675 YS(ph)DDGNRETDEK ddPTM_A459_MK2206_30min_R1 2 YSDDGNRETDEK 12 1 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 Y(0.008)S(0.992)DDGNRETDEK;YS(1)DDGNRETDEK 139.64 0.012717 3139600 2130.5 2443.3 2561.9 1677.06 1665.22 1905.01 2624.3 2073.62 2247.16 2892.3 TRUE FALSE 1949.289787 2284.240726 2388.005366 1806.227452 1598.890761 2012.87002 2449.237735 2055.490559 2480.760324 3250.61996 0.599667082 0.702709254 0.734630746 0.555656298 0.49187256 0.6192265 0.753467882 0.632338011 0.76316529 1 11.66649918 -8.860444795 0.870024235 1.001652897 0.6267903 0.691499477 0.074768128 0.728164994 1.004660424 0.080655185 0.027152206 1.38E-09 8.860444795 -0.374862597 YS(ph)GAYGASVSDEELK ddPTM_A459_MK2206_30min_R1 5 YSGAYGASVSDEELK 15 0 A0A286YEX5;C9JRZ6;F8WAR4;Q9NX63 A0A286YEX5 CHCHD3 MICOS complex subunit MIC19 1 YS(1)GAYGASVSDEELK;YS(0.999)GAYGAS(0.001)VS(0.001)DEELK;YS(1)GAYGASVSDEELK;YS(0.996)GAYGAS(0.004)VSDEELK;YS(1)GAYGASVSDEELK 279.19 4.14E-55 109309400 8080.26 8587.1 8876.6 7187.99 6586.57 5752.16 8455.5 7124.99 10171.5 11438.3 TRUE FALSE 7392.991456 8028.078229 8274.081124 7741.610235 6324.21297 6077.842328 7891.449023 7062.696964 11228.86382 12855.36296 0.57509006 0.624492537 0.643628745 0.602208608 0.491951335 0.472786521 0.61386435 0.549396932 0.873476996 1 13.65008272 -8.386243937 3.2461757 0.996012336 0.57143044 0.883818933 0.053737949 0.079719351 1.510990576 0.057092503 0.015322647 4.11E-09 8.386243937 -0.424581896 YS(ph)GAYGASVSDEELK ddPTM_A459_MK2206_30min_R2 3 YSGAYGASVSDEELK 15 0 A0A286YEX5;C9JRZ6;F8WAR4;Q9NX63 A0A286YEX5 CHCHD3 MICOS complex subunit MIC19 1 YS(1)GAYGASVSDEELK;Y(0.185)S(0.815)GAYGASVSDEELK;Y(0.004)S(0.996)GAYGASVSDEELK 199.33 2.24E-05 65587500 286495 198790 244955 226584 254214 177588 330189 215375 191113 292750 TRUE FALSE 308429.2775 188918.3777 253121.6774 208071.3624 244232.281 184346.2358 286834.7877 243525.252 207735.6633 283197.5915 1.089095694 0.66709034 0.893798835 0.734721511 0.862409457 0.650945634 1.012843316 0.859912864 0.733536123 1 18.11144947 -9.866149825 7.009929371 0.999999999 0.829258332 0.118434121 0.135505315 166119275.3 0 0.121702072 0.030425518 1.36E-10 9.866149825 -0.170741667 YS(ph)GAYGASVSDEELKR ddPTM_A459_MK2206_30min_R1 4 YSGAYGASVSDEELKR 16 1 A0A286YEX5;C9JRZ6;F8WAR4;Q9NX63 A0A286YEX5 CHCHD3 MICOS complex subunit MIC19 1 YS(1)GAYGASVSDEELKR;YS(1)GAYGASVSDEELKR;YS(0.709)GAYGAS(0.145)VS(0.145)DEELKR;YS(0.997)GAYGAS(0.003)VSDEELKR 234.63 1.34E-15 30183900 8169.4 6950.17 8129.9 6873.85 6698.5 5948.88 7840.5 6884.9 8507.7 9349.1 TRUE FALSE 7474.549631 6497.71267 7578.065039 7403.275118 6431.684561 6285.700445 7317.474551 6824.706045 9392.10586 10507.33709 0.711364789 0.61839766 0.721216515 0.70458148 0.61211366 0.598220119 0.696415703 0.64951814 0.893861668 1 13.35910947 -8.394281081 3.059460001 0.997511517 0.661964946 0.878086971 0.042941793 0.076496793 1.32856726 0.041969462 0.011309313 4.03E-09 8.394281081 -0.33554657 YS(ph)GAYGASVSDEELKR ddPTM_A459_MK2206_30min_R2 4 YSGAYGASVSDEELKR 16 1 A0A286YEX5;C9JRZ6;F8WAR4;Q9NX63 A0A286YEX5 CHCHD3 MICOS complex subunit MIC19 1 Y(0.047)S(0.949)GAY(0.003)GASVSDEELKR;Y(0.088)S(0.884)GAY(0.028)GASVSDEELKR;YS(1)GAYGASVSDEELKR;YS(1)GAYGASVSDEELKR 164.63 4.16E-05 49742900 103949 82020 94575 72530 91070 83478 115949 69083.6 62560 109704 TRUE FALSE 111907.4154 77947.00607 97728.0833 66604.06699 87494.13421 86654.81379 100724.757 78113.06372 68001.35572 106124.3675 1.05449312 0.734487356 0.920882599 0.627603901 0.824449053 0.816540215 0.949119975 0.736052102 0.640770422 1 16.69539643 -4.752135966 24.96446984 0.800761397 1.054493626 0.282552401 0.118787904 469.7890953 1260524.45 0.028419945 0.349747801 1.77E-05 4.752135966 0.253732229 YS(ph)GSYNDYLR ddPTM_A459_MK2206_30min_R2 2 YSGSYNDYLR 10 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 YS(0.847)GS(0.153)YNDYLR;Y(0.001)S(0.6)GS(0.397)Y(0.002)NDYLR 130.15 0.0028271 10509300 36785 45183 36242 42252 36082 38168 38844 33751 31887 36769 TRUE FALSE 39601.28788 42939.27792 37450.29019 38799.87644 34665.23938 39620.50999 33743.73614 38162.37158 34660.47362 35569.23054 1.113358014 1.20720289 1.052884463 1.090826983 0.974585023 1.113898428 0.948677709 1.072904052 0.974451038 1 15.11834214 -5.602310436 1.471165671 1.020268614 1.16140983 0.466685586 0.056062299 0.366056444 1.530780947 0.01648165 0.047656965 2.50E-06 5.602310436 0.141141216 YS(ph)ISLSPPEQQK ddPTM_A459_MK2206_30min_R2 1 YSISLSPPEQQK 12 0 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 "Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2" 1 YS(0.417)IS(0.4)LS(0.183)PPEQQK 143.42 0.00082679 7616100 29445 25408 25724 22718 21163 18163 26515 22196 16464 24436 TRUE FALSE 31699.33184 24146.27567 26581.62532 20861.86673 20332.03428 18854.20569 23033.54865 25097.09341 17896.00896 23638.65532 1.34099556 1.021474163 1.124498198 0.882531872 0.860118057 0.797600601 0.974401815 1.061697168 0.757065439 1 14.52886035 -3.284061692 0.76399112 0.908110025 5.031740215 0.606290459 0.102494259 15.21080469 1.089538462 0.03832068 88.65658097 0.000519922 3.284061692 4.12363019 YS(ph)PPAISPLVSEK ddPTM_A459_MK2206_30min_R1 2 YSPPAISPLVSEK 13 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 Y(0.013)S(0.987)PPAISPLVSEK;YS(0.999)PPAISPLVSEK 137.8 0.0010219 53095000 6106.4 6329.4 6721.5 4907.4 5387.3 5312 6866.6 4725.5 7221.4 9732.5 TRUE FALSE 5587.018614 5917.35491 6265.263307 5285.368798 5172.712433 5612.760849 6408.541643 4684.185452 7972.090372 10938.23558 0.510778779 0.540978924 0.572785552 0.483201222 0.472901904 0.513132197 0.585884405 0.428239584 0.728827818 1 13.41709242 -8.54842702 3.717300858 0.999466324 0.517431267 0.919903978 0.045029954 0.051907668 2.12909491 0.042962699 0.011297807 2.83E-09 8.54842702 -0.482035057 YS(ph)PPAISPLVSEK ddPTM_A459_MK2206_30min_R2 2 YSPPAISPLVSEK 13 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 Y(0.003)S(0.997)PPAISPLVSEK;Y(0.023)S(0.973)PPAIS(0.004)PLVSEK 119.62 0.0031943 24467000 44107 34579 32398 37899 33964 24302 41492 34668 25867 36986 TRUE FALSE 47483.86583 32861.85714 33478.13315 34802.53047 32630.4027 25226.82964 36044.05056 39199.22663 28116.8649 35779.14985 1.327137901 0.91846389 0.935688335 0.972704232 0.911994914 0.705070684 1.007403773 1.095588542 0.785844969 1 15.12683149 -4.760800423 24.97247555 0.925835241 1.327138364 0.564409396 0.105756309 11.60814993 453331.9326 0.026505925 0.15355033 1.73E-05 4.760800423 0.401303123 YS(ph)PPRDDDKVDNQAK ddPTM_A459_MK2206_30min_R1 1 YSPPRDDDKVDNQAK 15 2 Q14669;Q14669-2;Q14669-3;Q14669-4 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 Y(0.335)S(0.665)PPRDDDKVDNQAK 112.57 0.003363 85314000 6606.7 7446.3 7873.1 7364.2 4816.2 4603.8 4740.6 5206.1 6525.8 6249.8 TRUE FALSE 6044.765472 6961.544517 7338.695908 7931.39196 4624.360556 4864.463177 4424.363224 5160.583617 7204.180263 7024.072408 0.860578468 0.991098057 1.044792178 1.129172864 0.658358896 0.692541719 0.629885765 0.734699661 1.025641515 1 12.778092 -6.263641986 24.99639999 0.76402549 1.00805821 0.353921725 0.140467733 202.6921412 2300259.098 0.04363409 0.051915618 5.45E-07 6.263641986 0.24403272 YS(ph)PSQNS(ph)PIHHIPSR ddPTM_A459_MK2206_30min_R1 2 YSPSQNSPIHHIPSR 15 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 2 Y(0.044)S(0.91)PS(0.096)QNS(0.95)PIHHIPSR;Y(0.222)S(0.777)PS(0.177)QNS(0.824)PIHHIPSR 115.38 0.0095033 64399000 7734 6827.4 7124.7 5274.4 6792 7319.4 8899.1 6245.8 7054.9 8888.7 TRUE FALSE 7076.182687 6382.935019 6641.095215 5680.635202 6521.460258 7733.818103 8305.457276 6191.193629 7788.282101 9989.899262 0.708333738 0.638938877 0.664780999 0.568637886 0.652805407 0.774163773 0.831385488 0.619745351 0.779615679 1 13.28625441 -6.754394993 5.650348247 0.779790394 0.642146585 0.396763362 0.093324769 0.194159273 20.25712361 0.031237241 0.029554527 1.76E-07 6.754394993 -0.137643809 YS(ph)PSQNS(ph)PIHHIPSR ddPTM_A459_MK2206_30min_R2 2 YSPSQNSPIHHIPSR 15 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 2 Y(0.124)S(0.758)PS(0.129)QNS(0.989)PIHHIPSR;Y(0.01)S(0.875)PS(0.292)QNS(0.823)PIHHIPSR 135.55 0.0074483 63887700 52959 52932 54252 65448 51672 50971 67345 51819 49134 65480 TRUE FALSE 57013.58176 50303.47385 56060.7346 60100.68904 49643.09765 52910.73712 58502.5206 58591.92122 53407.58651 63343.39296 0.900071485 0.794139238 0.885028919 0.948807543 0.783713902 0.835300015 0.923577312 0.924988676 0.84314376 1 15.95090653 -14.52287874 0.217385936 1.650896042 0.854144723 0.34583362 0.053243018 176.4481103 1.759589174 50.14286175 0.107127664 3.00E-15 14.52287874 -0.796751318 YS(ph)PSQNSPIHHIPS(ph)R ddPTM_A459_MK2206_30min_R1 1 YSPSQNSPIHHIPSR 15 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 2 YS(0.997)PS(0.003)QNS(0.003)PIHHIPS(0.997)R 152.86 0.003984 14226000 1755.5 1790.3 1782.2 1100.2 1662.7 2022.6 2658.2 1473.1 1837.9 2651.8 TRUE FALSE 1606.185507 1673.751145 1661.229229 1184.937595 1596.471138 2137.117864 2480.876328 1460.220842 2028.956282 2980.325004 0.538929648 0.561600209 0.557398682 0.397586704 0.535670149 0.71707544 0.83241805 0.489953559 0.680783565 1 11.54125395 -6.742797915 5.723240499 0.718391044 0.514744041 0.430842167 0.128206061 0.188392605 19.15432456 0.043358698 0.041625856 1.81E-07 6.742797915 -0.203647003 YS(ph)PSQNSPIHHIPS(ph)RR ddPTM_A459_MK2206_30min_R1 1 YSPSQNSPIHHIPSRR 16 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 2 Y(0.001)S(0.778)PS(0.191)QNS(0.054)PIHHIPS(0.976)RR 99.964 0.01535 3684100 1664.1 1582.2 1675.9 1746.4 2422 2118.8 1933.8 1971.7 989.83 1127.3 TRUE FALSE 1522.559556 1479.198492 1562.144577 1880.908031 2325.526611 2238.764625 1804.79973 1954.461635 1092.726371 1266.958435 1.201743889 1.167519353 1.232988024 1.484585428 1.835519262 1.767038731 1.424513765 1.542640691 0.862480047 1 10.30715348 -5.715257686 5.150382535 1.471975088 1.191106832 0.086046506 0.286728898 0.377868848 22.26853842 0.080949604 0.139591953 1.93E-06 5.715257686 -0.280868256 YS(ph)PSQNSPIHHIPSR ddPTM_A459_MK2206_30min_R1 3 YSPSQNSPIHHIPSR 15 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 Y(0.001)S(0.992)PS(0.006)QNS(0.001)PIHHIPSR;YS(0.558)PS(0.442)QNSPIHHIPSR;Y(0.09)S(0.845)PS(0.065)QNSPIHHIPSR 146.18 0.00023046 33736200 6742.5 6065.1 6616.3 5299.9 8164.1 7977.1 8271.5 6539.3 6121.9 5996.1 TRUE FALSE 6169.014969 5670.260888 6167.20399 5708.099216 7838.906609 8428.756508 7719.723327 6482.12759 6758.293412 6738.942136 0.915427799 0.841417061 0.915159066 0.847031938 1.163225095 1.250753655 1.14553934 0.96189097 1.00287156 1 12.71830642 -6.255920109 24.97857952 1.096551293 0.879548828 0.588718883 0.084806734 349.7183119 1582721.135 0.028293469 0.035484591 5.55E-07 6.255920109 -0.217002465 YS(ph)PSQNSPIHHIPSR ddPTM_A459_MK2206_30min_R2 2 YSPSQNSPIHHIPSR 15 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 Y(0.008)S(0.937)PS(0.055)QNSPIHHIPSR;Y(0.066)S(0.919)PS(0.014)QNS(0.002)PIHHIPSR 190.8 1.84E-05 66826000 135253 167252 103687 210600 124668 144405 196146 146286 116512 163809 TRUE FALSE 145608.0737 158946.5089 107143.8728 193393.3063 119772.9079 149900.4335 170391.7946 165406.0825 126646.0032 158463.9257 0.918872059 1.003045382 0.676140467 1.220424809 0.755837061 0.945959358 1.075271825 1.043809067 0.79921031 1 17.27379492 -7.005657065 24.97868924 0.98713671 0.916218332 0.037960678 0.151627321 916.7144398 4047748.406 0.052351622 0.044739521 9.87E-08 7.005657065 -0.070918378 YS(ph)PSQNSPIHHIPSRR ddPTM_A459_MK2206_30min_R2 1 YSPSQNSPIHHIPSRR 16 1 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 Y(0.1)S(0.703)PS(0.197)QNSPIHHIPSRR 69.422 0.031101 10887000 3267.4 13421 11603 19633 17341 22912 13564 8907.7 17243 9899.8 TRUE FALSE 3517.554656 12754.53266 11989.83823 18028.9211 16660.10521 23783.93222 11783.03051 10071.96697 18742.76497 9576.770337 0.367300722 1.331819831 1.251970947 1.882567971 1.739637124 2.48350241 1.230376222 1.051708104 1.957107074 1 13.22532349 -4.762053903 1.657329813 1.625093939 8.16E-15 0.400818979 0.439716754 1.10486602 2.874158323 0.125139074 2.95280866 1.73E-05 4.762053903 -1.625093939 YS(ph)SPPASTTR ddPTM_A459_MK2206_30min_R1 1 YSSPPASTTR 10 0 Q08999;F5H837 Q08999 RBL2 Retinoblastoma-like protein 2 1 YS(0.5)S(0.5)PPASTTR 136.49 0.0018501 17555000 5526.4 5390.8 5528 4275.9 5727.5 5600.6 5637.9 4815.3 4407.6 4476.6 TRUE FALSE 5056.35066 5039.85794 5152.774762 4605.230559 5499.361547 5917.701132 5261.805978 4773.20034 4865.785793 5031.195005 1.004999936 1.001721845 1.024165185 0.915335334 1.093052752 1.176201902 1.045836222 0.948720997 0.967123276 1 12.29668539 -5.266190118 18.30302694 1.024659105 1.003360886 0.008475571 0.070522141 67.9896267 262040.3173 0.020511237 0.045616059 5.42E-06 5.266190118 -0.021298219 YS(ph)SPPASTTR ddPTM_A459_MK2206_30min_R2 2 YSSPPASTTR 10 0 Q08999;F5H837 Q08999 RBL2 Retinoblastoma-like protein 2 1 YS(0.749)S(0.251)PPASTTR;Y(0.003)S(0.947)S(0.049)PPAS(0.001)TTR 126.03 0.0035263 24363000 99568 126673 107474 136210 121350 139060 132128 101010 115621 118789 TRUE FALSE 107191.0026 120382.603 111057.1295 125081.2073 116585.1893 144352.0257 114779.4349 114212.3538 125677.5056 114912.9247 0.932801971 1.047598461 0.96644594 1.088486849 1.01455245 1.256186162 0.99883834 0.993903464 1.093675981 1 16.81018155 -3.431759781 0.760012918 1.063191075 0.125100563 0.172312758 0.078782894 32.06172037 2.831715896 0.029533885 40.61207851 0.000370033 3.431759781 -0.938090513 YS(ph)SPTAGSAK ddPTM_A459_MK2206_30min_R2 3 YSSPTAGSAK 10 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 YS(0.499)S(0.499)PT(0.001)AGSAK;YS(0.57)S(0.333)PT(0.097)AGSAK;YS(0.844)S(0.153)PT(0.002)AGSAK 123.62 0.0040969 197814500 292538 322953 303194 348939 356200 295465 362716 263163 273941 312118 TRUE FALSE 314934.9342 306915.6236 313302.3366 320429.5675 342213.7982 306709.1276 315090.9535 297559.3077 297767.893 301933.6152 1.04306019 1.016500344 1.03765305 1.061258341 1.133407415 1.015816432 1.043576924 0.985512353 0.986203185 1 18.20387186 -7.643207055 2.246828336 0.987902563 1.053129626 0.424326666 0.031477322 0.320925086 3.237996232 0.020855433 0.009895078 2.27E-08 7.643207055 0.065227063 YS(ph)SYQGSR ddPTM_A459_MK2206_30min_R2 1 YSSYQGSR 8 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 YS(0.612)S(0.388)YQGSR 84.817 0.036143 9952400 27297 29516 29954 35068 33319 36646 25351 20518 30530 25871 TRUE FALSE 29386.87931 28050.27836 30952.65141 32202.83222 32010.72865 38040.58921 22022.38325 23199.77305 33185.44421 25026.83139 1.17421494 1.120808221 1.236778677 1.286732296 1.279056391 1.519992228 0.879950918 0.926996018 1.325994637 1 14.61118802 -7.279088472 24.99594576 1.027151743 1.262551104 0.380649428 0.147456855 950.5010098 1346164.166 0.063375488 0.042833951 5.26E-08 7.279088472 0.235399362 YSCPES(ph)PSQELGGPLPSPGPR ddPTM_A459_MK2206_30min_R1 3 YSCPESPSQELGGPLPSPGPR 21 0 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 YSCPES(0.975)PS(0.025)QELGGPLPSPGPR;Y(0.001)S(0.002)CPES(0.874)PS(0.115)QELGGPLPS(0.008)PGPR;YSCPES(0.875)PS(0.124)QELGGPLPSPGPR 213.01 4.25E-18 41550600 3737.62 3825.92 3923.07 3297.14 4907.51 4862.92 5360.1 5073.6 4784.4 4364.2 TRUE FALSE 3419.715792 3576.851913 3656.782939 3551.086294 4712.033485 5138.254328 5002.537509 5029.24205 5281.755501 4904.870044 0.697208236 0.729244991 0.745541249 0.723991923 0.960684675 1.047582154 1.019912345 1.02535684 1.07683903 1 12.2599992 -6.348568488 3.069381533 1.033502496 0.722645186 0.976313188 0.02292501 0.035829704 0.654458557 0.007514688 0.008830167 4.48E-07 6.348568488 -0.31085731 YSCPES(ph)PSQELGGPLPSPGPR ddPTM_A459_MK2206_30min_R2 2 YSCPESPSQELGGPLPSPGPR 21 0 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 YSCPES(0.972)PS(0.028)QELGGPLPSPGPR;YS(0.002)CPES(0.991)PS(0.007)QELGGPLPSPGPR 167.05 3.48E-10 37136000 92615 102230 100341 116362 128802 117365 129014 102761 127299 141905 TRUE FALSE 99705.67561 97153.40686 103686.3189 106854.8524 123744.5863 121831.4073 112074.3068 116192.2155 138371.2369 137274.6515 0.726322555 0.707730129 0.755320212 0.778401921 0.901437993 0.887501123 0.816423904 0.846421494 1.007988259 1 17.06670572 -3.771866899 0.154437178 1.051265853 0.241152055 0.778142697 0.047513272 16.42636837 0.315383828 0.199626414 2.712168365 0.000169096 3.771866899 -0.810113799 YSCPESPSQELGGPLPS(ph)PGPR ddPTM_A459_MK2206_30min_R1 2 YSCPESPSQELGGPLPSPGPR 21 0 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 YSCPESPSQELGGPLPS(1)PGPR;YSCPESPSQELGGPLPS(1)PGPR 252.37 3.87E-39 59653000 8095 8781.6 7371.9 5334.6 7028.7 5831.1 5793.8 4480.6 5071.3 4167.2 TRUE FALSE 7406.477741 8209.916244 6871.515967 5745.471816 6748.731995 6161.251843 5407.306173 4441.426587 5598.479783 4683.464197 1.581410134 1.752958045 1.467186612 1.226756857 1.440970126 1.315533029 1.154552687 0.948320816 1.195371534 1 12.19336032 -5.796458627 0.363693992 0.987151212 1.911369676 0.772006618 0.115279411 1.433579063 0.259401404 0.121676991 0.54609755 1.60E-06 5.796458627 0.924218464 YSCPESPSQELGGPLPS(ph)PGPR ddPTM_A459_MK2206_30min_R2 2 YSCPESPSQELGGPLPSPGPR 21 0 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 YSCPES(0.001)PS(0.002)QELGGPLPS(0.998)PGPR;YSCPESPSQELGGPLPS(1)PGPR 217.18 2.47E-20 61726000 48106 49593 43887 49695 45154 44740 42555 31451 33253 35765 TRUE FALSE 51789.03235 47130.28373 45350.17068 45634.75953 43381.02708 46442.61205 36967.47738 35561.75369 36145.28583 34597.99098 1.496879758 1.362226025 1.310774684 1.319000273 1.253859714 1.342349967 1.068486243 1.027856031 1.044722101 1 15.07840065 -7.193786677 0.745641177 0.980697068 1.390139241 0.855265327 0.062510071 0.253528078 0.281820765 0.053169786 0.035277714 6.40E-08 7.193786677 0.409442173 YSDASDDS(ph)FSEPR ddPTM_A459_MK2206_30min_R2 1 YSDASDDSFSEPR 13 0 Q9NRF8 Q9NRF8 CTPS2 CTP synthase 2 1 YSDAS(0.001)DDS(0.999)FS(0.001)EPR 122.64 0.0019436 0 5950.7 5264.6 6808.3 7116.3 9079.3 8914.1 8208.2 1779.7 5909.5 6630 TRUE FALSE 6406.290167 5003.167619 7035.285324 6534.875526 8722.801062 9253.332322 7130.45348 2012.312901 6423.497628 6413.663643 0.998850349 0.780079514 1.096921466 1.018899008 1.360034069 1.442752978 1.111759811 0.313754043 1.001533287 1 12.64693298 -7.587174502 24.99999894 0.737134642 1.12096441 0.28253822 0.249212344 75.33775399 29292.09127 0.121493906 0.070144539 2.59E-08 7.587174502 0.383829767 YSDVEVPASVTGYSFASDGDS(ph)GTCSPLRHSFQK ddPTM_A459_MK2206_30min_R2 1 YSDVEVPASVTGYSFASDGDSGTCSPLRHSFQK 33 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 YSDVEVPAS(0.001)VT(0.001)GY(0.001)S(0.001)FAS(0.018)DGDS(0.411)GT(0.139)CS(0.318)PLRHS(0.109)FQK 47.646 0.0063179 10516000 74067 146850 121890 160830 170120 172450 165430 117800 151000 137240 TRUE FALSE 79737.62647 139557.6425 125953.7518 147689.6745 163440.234 179012.7056 143708.8423 133196.8645 164133.7071 132761.87 0.600606382 1.051187683 0.948719325 1.112440451 1.231078125 1.34837439 1.082455695 1.003276501 1.23630156 1 17.01848133 -4.424818279 1.118640907 1.145838957 2.41E-13 0.636071604 0.117142815 2.224594624 1.361862972 0.037449861 3.63556991 3.76E-05 4.424818279 -1.145838957 YSDVEVPASVTGYSFASDGDSGTCS(ph)PLR ddPTM_A459_MK2206_30min_R1 2 YSDVEVPASVTGYSFASDGDSGTCSPLR 28 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 YSDVEVPASVTGYSFAS(0.011)DGDS(0.031)GT(0.022)CS(0.936)PLR;YSDVEVPASVTGYSFASDGDS(0.009)GT(0.016)CS(0.974)PLR 139.73 8.69E-13 23358000 13962.1 13216.2 14635.4 12049.4 15925.9 12005.2 14437.8 13223.5 11511.2 11387.3 TRUE FALSE 12774.55008 12355.82298 13641.98982 12977.44688 15291.53768 12684.92405 13474.68071 13107.88833 12707.83043 12798.04469 0.998164203 0.96544615 1.065943287 1.014017937 1.194833902 0.991161099 1.052870265 1.024210233 0.992950934 1 13.64363579 -5.259432839 24.94122528 1.045894872 0.981805174 0.148439239 0.057061559 300.5680253 3735959.57 0.014581535 0.034905259 5.50E-06 5.259432839 -0.064089698 YSDVEVPASVTGYSFASDGDSGTCS(ph)PLRHSFQK ddPTM_A459_MK2206_30min_R1 1 YSDVEVPASVTGYSFASDGDSGTCSPLRHSFQK 33 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 YSDVEVPASVTGY(0.003)S(0.033)FAS(0.109)DGDS(0.044)GT(0.044)CS(0.383)PLRHS(0.383)FQK 67.138 6.60E-05 31513000 4153.4 3834.2 4699.9 3677.1 6961.6 5696.4 4863.1 5380.9 3829.4 2865.8 TRUE FALSE 3800.13152 3584.592883 4380.883883 3960.310879 6684.304731 6018.925245 4538.691472 5333.855359 4227.479834 3220.83694 1.1798584 1.112938329 1.360169411 1.229590617 2.075331616 1.86874572 1.409165244 1.656046381 1.312540781 1 11.65321991 -6.066999587 24.99998509 1.600198923 1.221794034 0.237415093 0.285170673 237.6712584 88683.06771 0.083877823 0.108285873 8.57E-07 6.066999587 -0.378404889 YSDVEVPASVTGYSFASDGDSGTCS(ph)PLRHSFQK ddPTM_A459_MK2206_30min_R2 1 YSDVEVPASVTGYSFASDGDSGTCSPLRHSFQK 33 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 YSDVEVPASVTGY(0.002)S(0.003)FAS(0.008)DGDS(0.181)GT(0.136)CS(0.335)PLRHS(0.335)FQK 59.732 0.00030492 18748000 44343 77140 62627 92059 91644 90667 84758 66024 83505 64836 TRUE FALSE 47737.93417 73309.33977 64714.95292 84537.48522 88045.59609 94117.39622 73629.17279 74653.56349 90768.11396 62720.40663 0.761122842 1.168827559 1.031800596 1.347846574 1.403779102 1.500586512 1.173926904 1.190259558 1.447186312 1 15.93664729 -4.324191646 0.956358354 1.30092158 3.18E-13 0.484815274 0.156831658 3.654051979 1.458419421 0.051564966 6.058248891 4.74E-05 4.324191646 -1.30092158 YSDVEVPASVTGYSFASDGDSGTCSPLRHS(ph)FQK ddPTM_A459_MK2206_30min_R1 1 YSDVEVPASVTGYSFASDGDSGTCSPLRHSFQK 33 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 YSDVEVPASVTGY(0.001)S(0.001)FAS(0.01)DGDS(0.128)GT(0.037)CS(0.176)PLRHS(0.646)FQK 70.771 3.47E-05 24966000 3173.4 2795.2 2965.2 2364.3 4099.2 3885.6 3624.7 3624.8 2304.8 1973.8 TRUE FALSE 2903.485666 2613.231972 2763.930486 2546.398796 3935.920184 4105.599314 3382.902877 3593.108756 2544.392208 2218.329245 1.308861465 1.178018086 1.245951425 1.147890378 1.774272323 1.850761929 1.524977811 1.619736458 1.146985829 1 11.11525779 -6.241095334 24.67395986 1.537283978 1.219009516 0.199531911 0.248581176 946.9780514 1148527.011 0.072862332 0.093943757 5.74E-07 6.241095334 -0.318274462 YSEEGLS(ph)PSK ddPTM_A459_MK2206_30min_R1 2 YSEEGLSPSK 10 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 Y(0.033)S(0.015)EEGLS(0.869)PS(0.083)K;YSEEGLS(0.999)PS(0.001)K 166.11 0.00033625 102108000 6514.9 8284.5 8154.5 7173 6233.1 5858.8 6605.1 6354.5 7318.4 5902.2 TRUE FALSE 5960.773544 7745.177544 7600.99526 7725.465703 5984.822428 6190.520193 6164.485831 6298.943276 8079.173869 6633.409095 0.898598814 1.16760137 1.145865595 1.164629769 0.902224232 0.933233591 0.929308858 0.949578593 1.217951999 1 12.69553479 -6.256673611 24.97964744 0.980450643 1.103110971 0.177498106 0.109682826 639.6372879 3352642.964 0.033154942 0.04138439 5.54E-07 6.256673611 0.122660327 YSEEGLS(ph)PSK ddPTM_A459_MK2206_30min_R2 1 YSEEGLSPSK 10 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 YSEEGLS(0.856)PS(0.144)K 105.2 0.012654 45368000 96386 133590 114490 135380 128880 102710 155240 81491 108170 136860 TRUE FALSE 103765.3863 126956.1149 118307.0395 124319.0209 123819.5236 106618.701 134856.8015 92142.1535 117578.4311 132394.2694 0.783760405 0.958924547 0.893596377 0.939006057 0.935233256 0.805312054 1.01859999 0.695967838 0.888093054 1 17.01448115 -7.739125316 24.99999836 0.844022491 0.905206493 0.032833579 0.095311078 586.7551027 657383.6971 0.041768189 0.024091495 1.82E-08 7.739125316 0.061184003 YSEEGLS(ph)PSKR ddPTM_A459_MK2206_30min_R1 1 YSEEGLSPSKR 11 1 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 YSEEGLS(0.981)PS(0.019)KR 110.98 0.015285 10087000 3604.5 4062.2 4382 3288.6 3616.7 3324.5 3064.5 3359.7 3579.1 3189.6 TRUE FALSE 3297.918347 3797.750042 4084.562049 3541.888542 3472.639181 3512.730317 2860.072796 3330.326497 3951.160253 3584.751728 0.919985147 1.05941787 1.139426761 0.988042914 0.968725157 0.979908954 0.797844039 0.929025704 1.102213083 1 11.80765749 -5.990708089 24.83090018 0.954395335 1.04528142 0.130554919 0.086429409 337.7934037 902679.6677 0.025284752 0.037449221 1.02E-06 5.990708089 0.090886085 YSESNFS(ph)VDDQDLSR ddPTM_A459_MK2206_30min_R2 1 YSESNFSVDDQDLSR 15 0 Q5TH69 Q5TH69 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 1 YS(0.004)ES(0.074)NFS(0.922)VDDQDLSR 77.324 0.035096 2316500 5039.4 3665.2 5277.6 4062.3 5843.7 5544.3 5632.8 6005.8 6369 5600.1 TRUE FALSE 5425.220339 3483.191498 5453.55255 3730.397095 5614.246976 5755.292222 4893.206594 6790.778681 6922.964107 5417.369196 1.001449254 0.642967347 1.006679138 0.688599385 1.036341954 1.062377699 0.903244069 1.253519639 1.277919938 1 12.4033767 -6.944632108 0.936817444 1.168443885 0.832380076 0.389690407 0.152080709 0.535855988 0.986184033 0.096797424 0.074009114 1.14E-07 6.944632108 -0.336063808 YSHS(ph)GS(ph)SSPDTK ddPTM_A459_MK2206_30min_R1 1 YSHSGSSSPDTK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 YS(0.005)HS(0.993)GS(0.424)S(0.245)S(0.331)PDT(0.001)K 147.62 0.011368 4304500 4418.7 3485.8 3068.1 2345.2 2580.4 2392.4 3307.8 2682.9 433.22 1267.7 TRUE FALSE 4042.866361 3258.873786 2859.84592 2525.82771 2477.617204 2527.855621 3087.142697 2659.443688 478.2547693 1424.752247 2.837592551 2.287326652 2.007258404 1.7728189 1.738981082 1.774242242 2.166792651 1.866600803 0.335675743 1 10.47649535 -1.522878745 0.130659057 0.608936351 7.37978314 0.595032609 0.416366301 64.75152288 0.574124476 2.299650184 80.80028539 0.03 1.522878745 6.77084679 YSHS(ph)YLSDSDTEAK ddPTM_A459_MK2206_30min_R1 1 YSHSYLSDSDTEAK 14 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 YSHS(0.866)YLS(0.129)DS(0.005)DTEAK 246.31 2.94E-27 21197000 1433.9 1357.7 1444.1 1220.4 1148.2 948.74 1309.4 1332.6 1251.5 933.55 TRUE FALSE 1311.939275 1269.313483 1346.078515 1314.395419 1102.464763 1002.456839 1222.052315 1320.949219 1381.597904 1049.205222 1.250412453 1.209785709 1.282950644 1.25275341 1.050761795 0.955444005 1.164740977 1.258999852 1.316804258 1 10.03508118 -6.233352202 23.79156725 1.130971875 1.248603114 0.252904244 0.104484238 690.8421316 585184.7976 0.034066394 0.043967407 5.84E-07 6.233352202 0.117631239 YSHSGSSS(ph)PDTK ddPTM_A459_MK2206_30min_R1 3 YSHSGSSSPDTK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 YSHSGSSS(1)PDTK;YSHSGSS(0.033)S(0.967)PDTK;YSHSGSSS(1)PDTK 264.61 1.22E-25 30382000 26269.1 12820.6 10247.6 13143.5 6117 11187.6 22903.7 34823 383.97 9087.7 TRUE FALSE 24034.7751 11985.97661 9552.021463 14155.81465 5873.346937 11821.03224 21375.83596 34518.54618 423.8850556 10213.55288 2.353223738 1.173536452 0.935230039 1.38598339 0.575054244 1.157386893 2.092889341 3.379680565 0.041502214 1 13.31819719 -7.248600668 23.70368832 1.826824741 1.218683963 0.018107317 0.903810712 972.7724099 1795999.712 0.338360526 0.260111401 5.64E-08 7.248600668 -0.608140778 YSHSGSSS(ph)PDTK ddPTM_A459_MK2206_30min_R2 9 YSHSGSSSPDTK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 YSHSGSS(0.055)S(0.941)PDT(0.004)K;YSHS(0.006)GS(0.019)S(0.019)S(0.955)PDTK;YSHSGSS(0.003)S(0.997)PDTK;YS(0.003)HS(0.316)GS(0.057)S(0.057)S(0.563)PDT(0.003)K;YSHSGS(0.001)S(0.001)S(0.999)PDTK;YS(0.007)HS(0.022)GS(0.029)S(0.15)S(0.792)PDTK;YSHSGS(0.002)S(0.002)S(0.996)PDTK;YSHSGS(0.003)S(0.066)S(0.929)PDT(0.002)K;YSHSGSS(0.001)S(0.999)PDTK 223.36 1.56E-08 99916420 114656.5 107306.8 102131.4 126721 163616.7 101228.5 175882.4 263030.2 216968.4 180795.2 TRUE FALSE 123434.6898 101978.1004 105536.4099 116367.4889 157192.2863 105080.8215 152788.8296 297409.1503 235839.9192 174895.8674 0.705761043 0.583078959 0.603424263 0.665352993 0.898776447 0.600819351 0.873598855 1.700492725 1.348459073 1 17.41613668 -7.598950799 5.772016344 1.387910361 0.682541984 0.736484391 0.179540178 0.093838578 5.332513693 0.083215555 0.047337365 2.52E-08 7.598950799 -0.705368377 YSHSYLS(ph)DSDTEAK ddPTM_A459_MK2206_30min_R1 2 YSHSYLSDSDTEAK 14 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 YSHS(0.003)YLS(0.994)DS(0.003)DTEAK;YSHSYLS(0.995)DS(0.005)DTEAK 269.88 2.61E-44 41109000 10439.1 10437.4 10896.3 9388.2 8745.2 7645.9 9329.9 8890.2 9303.2 9149.7 TRUE FALSE 9551.199727 9757.923363 10156.68951 10111.28079 8396.860166 8078.804251 8707.519394 8812.473919 10270.30093 10283.23391 0.928812843 0.948915822 0.987694105 0.983278303 0.816558316 0.785628754 0.846768582 0.856974955 0.998742324 1 13.32800642 -6.248335955 24.93887723 0.870169553 0.963050943 0.22435969 0.068204399 1001.771122 1906603.894 0.020581639 0.026404872 5.65E-07 6.248335955 0.09288139 YSHSYLS(ph)DSDTEAK ddPTM_A459_MK2206_30min_R2 3 YSHSYLSDSDTEAK 14 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 YSHSYLS(0.996)DS(0.004)DTEAK;YSHSYLS(0.741)DS(0.243)DT(0.016)EAK;YSHSYLS(0.995)DS(0.005)DTEAK 219.95 8.40E-09 58832900 120944 132092 127810 134668 121692 98760 146733 126147 100170 137636 TRUE FALSE 130203.5656 125532.5034 132071.1216 123665.1936 116913.7606 102518.381 127466.7808 142634.846 108882.6055 133144.9486 0.977908415 0.94282588 0.991934903 0.928801242 0.878093851 0.769975745 0.957353487 1.071274934 0.817774964 1 17.02263817 -10.82444593 14.70867091 0.999976713 0.927884838 0.067077641 0.082338675 5.66E-11 0 0.082253924 0.019949507 1.50E-11 10.82444593 -0.072091875 YSHVQEVQER ddPTM_A459_MK2206_30min_R2 1 YSHVQEVQER 10 0 Q93008;Q93008-3;O00507-2;O00507 Q93008 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y 0 115.57 0.0092798 1122700 5613.7 7182 5938.1 5327.1 4902.7 6302.7 5063.9 4774 5239.5 5716.6 FALSE TRUE 6043.489188 6825.352324 6136.07329 4891.858889 4710.195364 6542.553665 4399.003847 5397.978192 5695.222239 5530.06781 1.092841787 1.234225792 1.109583734 0.88459293 0.851742786 1.183087421 0.795470146 0.976114286 1.029864811 1 12.43308146 -5.612022536 5.475427698 0.957730314 1.165542384 0.398809397 0.105496194 0.187569788 8.938116366 0.028232433 0.049840568 2.44E-06 5.612022536 0.207812069 YSISLS(ph)PPEQQKK ddPTM_A459_MK2206_30min_R1 1 YSISLSPPEQQKK 13 1 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 "Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2" 1 YS(0.005)IS(0.2)LS(0.795)PPEQQKK 67.646 0.035563 19355000 1994.2 3107.9 2552.9 2379.4 2371.8 2036 2894.3 2167.7 2103.4 3019.2 TRUE FALSE 1824.582818 2905.575145 2379.616261 2562.6618 2277.326184 2151.276561 2701.226528 2148.748027 2322.055957 3393.24129 0.537710897 0.856283092 0.701281181 0.755225338 0.67113594 0.633988678 0.796060845 0.633243511 0.68431796 1 11.72844831 -11.49842259 2.307341297 1.26200077 0.701616492 0.530736405 0.085473534 7967632.173 3267451.592 11139462.46 0.020417835 3.17E-12 11.49842259 -0.560384278 YSLADQTSGDQS(ph)PLPPCTPTPPCAEMR ddPTM_A459_MK2206_30min_R1 1 YSLADQTSGDQSPLPPCTPTPPCAEMR 27 0 Q06124;Q06124-1 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 1 YSLADQT(0.009)S(0.023)GDQS(0.968)PLPPCTPTPPCAEMR 103.15 2.62E-07 5239100 364.47 394.24 464.46 408.35 690.25 315.77 560.96 417.24 365.28 404.19 TRUE FALSE 333.4699126 368.5749043 432.9337493 439.8011878 662.7558809 333.6486245 523.5393819 413.5921147 403.2521632 454.2641087 0.73408818 0.811366994 0.953044145 0.968161867 1.458965981 0.734481589 1.152499993 0.910466195 0.887704213 1 8.827387513 -5.26345774 2.038983714 1.022754787 0.739041073 0.226047221 0.180164012 0.549130805 4.132573828 0.050182792 0.195960772 5.45E-06 5.26345774 -0.283713714 YSLQSANASSLSS(ph)GQLKSPSLSQSQASR ddPTM_A459_MK2206_30min_R2 1 YSLQSANASSLSSGQLKSPSLSQSQASR 28 1 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 YSLQS(0.001)ANAS(0.024)S(0.024)LS(0.062)S(0.598)GQLKS(0.196)PS(0.075)LS(0.012)QS(0.006)QAS(0.002)R 61.429 0.0017805 6883200 5478.9 5171.1 3157.5 6117.8 4770.2 2975.8 5336.5 5240.1 6567.3 3685.3 TRUE FALSE 5898.368797 4914.310693 3262.769474 5617.95617 4582.89798 3089.046154 4635.81114 5924.999062 7138.511883 3565.048963 1.654498678 1.378469341 0.915210284 1.57584264 1.285507724 0.866480709 1.300349922 1.661968496 2.002360124 1 11.79970618 -7.734600087 7.378791116 1.62446131 1.266446586 0.114817504 0.32827289 0.289649787 58.33604277 0.157291455 0.087608281 1.84E-08 7.734600087 -0.358014724 YSLQSANASSLSSGQLKS(ph)PSLSQSQASR ddPTM_A459_MK2206_30min_R2 1 YSLQSANASSLSSGQLKSPSLSQSQASR 28 1 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 YSLQSANASSLS(0.005)S(0.013)GQLKS(0.692)PS(0.251)LS(0.034)QS(0.005)QASR 87.352 1.43E-05 8106100 12639 11707 10263 11752 12444 11025 7545.1 8865.9 9127.9 10339 TRUE FALSE 13606.65156 11125.6474 10605.1633 10791.82401 11955.38603 11444.5641 6554.419307 10024.70357 9921.828243 10001.63928 1.360442142 1.11238239 1.06034251 1.079005522 1.195342654 1.144268833 0.655334503 1.002306051 0.992020205 1 13.28794886 -7.062403984 24.99866974 0.910777648 1.150694806 0.493535927 0.122044147 201.1649385 80584.72797 0.046527776 0.036040307 8.66E-08 7.062403984 0.239917158 YSLS(ph)PSK ddPTM_A459_MK2206_30min_R1 3 YSLSPSK 7 0 P49792;Q99666;O14715;J3KQ37;F8W705;Q99666-2 P49792;Q99666 RANBP2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 YS(0.003)LS(0.974)PS(0.023)K;YS(0.001)LS(0.984)PS(0.015)K;YS(0.003)LS(0.951)PS(0.047)K 104.01 0.018263 286709000 20695.3 21124 21642 19418.1 17486.1 17067.3 21353.6 19551.3 21740.1 19195.3 TRUE FALSE 18935.05606 19748.82376 20173.00134 20913.68543 16789.59161 18033.63578 19929.14031 19380.36505 24000.06119 21573.35868 0.877705523 0.915426478 0.93508858 0.969421857 0.778255804 0.835921566 0.923784775 0.898347139 1.112486078 1 14.39696318 -8.246484629 23.31135869 1.05624301 0.891991785 0.574522658 0.05662466 209.7591767 326974.0102 0.040454832 0.015120008 5.67E-09 8.246484629 -0.164251224 YSLS(ph)PSK ddPTM_A459_MK2206_30min_R2 3 YSLSPSK 7 0 P49792;Q99666;O14715;J3KQ37;F8W705;Q99666-2 P49792;Q99666 RANBP2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 Y(0.037)S(0.059)LS(0.86)PS(0.043)K;YS(0.001)LS(0.997)PS(0.002)K;YSLS(0.986)PS(0.014)K 112.11 0.014704 326365000 860410 886640 849310 901630 881400 654780 1033980 739160 656680 1025350 TRUE FALSE 926283.6511 842610.7469 877625.5715 827963.9448 846791.8073 679698.1117 898217.184 835770.7499 713796.8394 991892.9135 0.93385449 0.849497698 0.884798711 0.834731183 0.853712932 0.685253521 0.905558626 0.842601796 0.71963095 1 19.91982485 -3.778326412 0.753034557 0.826328713 1.292482264 0.091853704 0.084303605 23.53227607 3.282734584 0.030570301 13.15770617 0.000166599 3.778326412 0.466153552 YSPDEMNNS(ph)PNFEEK ddPTM_A459_MK2206_30min_R1 1 YSPDEMNNSPNFEEK 15 0 Q14687-3;Q14687;H0Y613;Q14687-2;H7C3B5 Q14687-3 GSE1 Genetic suppressor element 1 1 YSPDEMNNS(1)PNFEEK 144.15 0.00037449 4274600 822.05 579.29 900.82 685.71 517.83 643.16 609.67 673.79 631.55 532.19 TRUE FALSE 752.1303307 541.5781157 839.6748482 738.523503 497.2037346 679.5751634 569.0000267 667.8991251 697.2018825 598.121715 1.257487083 0.905464727 1.403852806 1.234737821 0.831275177 1.136182062 0.951311434 1.116660887 1.165652182 1 9.224295286 YSPPAIS(ph)PLVSEK ddPTM_A459_MK2206_30min_R1 2 YSPPAISPLVSEK 13 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 YS(0.001)PPAIS(0.999)PLVSEK;Y(0.029)S(0.168)PPAIS(0.803)PLVSEK 166.9 0.00031994 68142000 9385.1 8220.4 9115.2 8075.1 8370.6 7383.1 7949.1 8389.6 7236.8 6907.6 TRUE FALSE 8586.847962 7685.250466 8496.48562 8697.045601 8037.181277 7801.124742 7418.830043 8316.250612 7989.091257 7763.365638 1.106072851 0.989937976 1.094433267 1.120267421 1.035270223 1.004863754 0.955620331 1.071217176 1.029075742 1 12.92246652 -6.508637252 17.46260748 1.013849746 1.073252989 0.346704802 0.042265325 16.56626539 20313.54812 0.013844368 0.015025364 3.10E-07 6.508637252 0.059403242 YSPPAIS(ph)PLVSEK ddPTM_A459_MK2206_30min_R2 4 YSPPAISPLVSEK 13 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 YSPPAIS(0.969)PLVS(0.031)EK;YS(0.001)PPAIS(0.998)PLVS(0.001)EK;YSPPAIS(1)PLVSEK;YSPPAIS(1)PLVSEK 191.63 0.00017289 60483300 146021 167613 155756 176585 171104 157335 173295 135306 134739 158455 TRUE FALSE 157200.48 159289.5822 160948.8273 162157.4406 164385.5972 163322.4937 150541.1583 152990.9588 146458.3547 153284.6263 1.025546291 1.0391752 1.049999802 1.057884568 1.072420641 1.065485154 0.982102132 0.998084168 0.955466691 1 17.22585348 -7.267351864 24.90740717 0.98375359 1.052318872 0.799145674 0.016659838 210.4164369 886411.6285 0.007191536 0.00500277 5.40E-08 7.267351864 0.068565282 YSPS(ph)QNS(ph)PIHHIPSR ddPTM_A459_MK2206_30min_R1 1 YSPSQNSPIHHIPSR 15 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 2 Y(0.076)S(0.224)PS(0.856)QNS(0.844)PIHHIPSR 102.47 0.025071 5597400 2712.1 2116 1792.5 1508.3 2972.1 2596.8 2861.6 1710.8 2351 2414.6 TRUE FALSE 2481.421653 1978.248015 1670.830094 1624.469527 2853.714963 2743.828572 2670.707885 1695.842656 2595.394863 2713.738877 0.914392197 0.72897508 0.615693023 0.598609373 1.051580529 1.011087911 0.984143282 0.624910035 0.956390788 1 11.40606619 -6.258775039 24.94850463 0.925223943 0.70840551 0.388540137 0.136772008 274.1562118 2567157.66 0.044005585 0.054243212 5.51E-07 6.258775039 -0.216818432 YSPS(ph)QNSPIHHIPSR ddPTM_A459_MK2206_30min_R2 1 YSPSQNSPIHHIPSR 15 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 Y(0.001)S(0.373)PS(0.626)QNSPIHHIPSR 89.913 0.0083952 21822000 17245 27570 26045 36376 34347 43372 33614 29251 31860 37304 TRUE FALSE 18565.29046 26200.91389 26913.3273 33403.96444 32998.3642 45022.55185 29200.44142 33074.20613 34631.12521 36086.77354 0.514462465 0.726053103 0.745794779 0.92565672 0.914417139 1.247619209 0.809172962 0.916518793 0.959662553 1 15.13918254 -5.238626517 1.036391267 0.976205496 0.480473503 0.64382223 0.110154403 0.6526225 0.927362702 0.038916773 0.303420532 5.77E-06 5.238626517 -0.495731993 YSPSQNS(ph)PIHHIPSR ddPTM_A459_MK2206_30min_R1 1 YSPSQNSPIHHIPSR 15 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 Y(0.002)S(0.052)PS(0.028)QNS(0.919)PIHHIPSR 101.05 0.0047571 29904000 2639.7 2415.5 1995.9 1600.9 2524.8 2780.9 2669.1 2281 2202 2291.7 TRUE FALSE 2415.179653 2258.250511 1860.423869 1724.201595 2424.23187 2938.352155 2491.049209 2261.057457 2430.90578 2575.613097 0.937710581 0.876781731 0.722322724 0.669433463 0.941225168 1.140836004 0.967167472 0.877871548 0.943816361 1 11.33070018 -6.501447398 23.83639468 0.984231896 0.80178174 0.471835551 0.092704942 416.8894835 463673.6984 0.031740786 0.035604138 3.15E-07 6.501447398 -0.182450156 YSPSQNS(ph)PIHHIPSR ddPTM_A459_MK2206_30min_R2 2 YSPSQNSPIHHIPSR 15 0 E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00;Q9NYF8-2;Q9NYF8;Q9NYF8-4 E9PK91;Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 YSPS(0.005)QNS(0.995)PIHHIPSR;Y(0.001)S(0.012)PS(0.127)QNS(0.861)PIHHIPSR 77.372 0.018246 54776300 59327 75479 58440 73176 67513 76466 85550 73886 68219 67926 TRUE FALSE 63869.12073 71730.82262 60388.36043 67197.28672 64862.10039 79375.96721 74317.18224 83543.15389 74152.56531 65709.58018 0.971991003 1.091634164 0.919019118 1.022640634 0.987102645 1.207981652 1.130994629 1.271399903 1.128489409 1 16.0038161 -6.754793896 24.99479005 1.163686961 1.000580898 0.479479427 0.076872551 121.0325597 455223.3233 0.024152714 0.023626178 1.76E-07 6.754793896 -0.163106064 YSPT(ph)SPTYSPT(ph)SPK ddPTM_A459_MK2206_30min_R1 3 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 YS(0.092)PT(0.743)S(0.057)PT(0.102)Y(0.049)S(0.058)PT(0.565)S(0.334)PK;YS(0.137)PT(0.809)S(0.054)PTY(0.001)S(0.006)PT(0.794)S(0.199)PK;YS(0.004)PT(0.787)S(0.207)PT(0.002)YSPT(0.615)S(0.384)PK 176.56 0.0005697 16221000 10670.2 13647.4 13552 10986.1 8465.6 8060.6 10009.7 9856.9 11977.9 11119.9 TRUE FALSE 9762.643459 12758.95178 12632.128 11832.25133 8128.397226 8516.984206 9341.971177 9770.722163 13223.04557 12497.51716 0.781166637 1.020918924 1.010771006 0.94676816 0.650400965 0.6814941 0.747506169 0.781813062 1.058053803 1 13.60935389 -6.083201014 18.07021222 0.798436691 0.951418516 0.145531877 0.135583166 11.2429725 2439.532784 0.040687586 0.052528142 8.26E-07 6.083201014 0.152981826 YSPT(ph)SPTYSPT(ph)SPK ddPTM_A459_MK2206_30min_R2 2 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 YS(0.003)PT(0.782)S(0.224)PT(0.012)Y(0.004)S(0.282)PT(0.691)S(0.002)PK;YS(0.002)PT(0.438)S(0.56)PTYS(0.182)PT(0.816)S(0.002)PK 202.32 0.00039748 63041000 164374 150885 142944 130480 138412 105397 171405 123698 102834 162078 TRUE FALSE 176958.5998 143392.2703 147709.6816 119819.3666 132977.2494 109407.9567 148899.3176 139865.7533 111778.3154 156789.4081 1.128638739 0.914553298 0.942089669 0.764205746 0.848126484 0.697801962 0.949677146 0.892061237 0.712920068 1 17.25846858 -4.238569507 1.097338866 0.836550663 1.717882972 0.438992512 0.095201949 4.340077523 1.891106049 0.028384418 5.919862257 5.77E-05 4.238569507 0.881332309 YSPT(ph)SPTYSPTTPK ddPTM_A459_MK2206_30min_R1 1 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.492)S(0.492)PT(0.015)YS(0.001)PTTPK 180.95 0.00017378 63670000 6094.4 6210 6173.9 5340.1 5491.6 5025.4 5828.6 5525.3 5566.7 4630 TRUE FALSE 5576.039277 5805.727871 5754.832869 5751.395427 5272.857943 5309.933805 5439.784729 5476.992885 6145.378386 5203.599355 1.07157352 1.11571385 1.10593312 1.105272531 1.013309747 1.020434788 1.045388847 1.052539312 1.180986077 1 12.34529417 -6.228021662 24.27879629 1.052816957 1.101223304 0.190216198 0.047968008 794.377167 577134.0523 0.01438563 0.018570116 5.92E-07 6.228021662 0.048406348 YSPT(ph)SPTYSPTTPK ddPTM_A459_MK2206_30min_R2 2 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YS(0.199)PT(0.578)S(0.215)PT(0.008)YSPTTPK;YS(0.029)PT(0.621)S(0.341)PT(0.009)YSPTTPK 211.82 7.68E-06 164878000 560050 727610 599090 680860 660460 599790 698200 602720 589090 700550 TRUE FALSE 602927.8586 691477.9454 619063.3616 625231.56 634527.0219 622615.4287 606525.5013 681497.5734 640327.9834 677691.1109 0.889679456 1.020343833 0.91348898 0.922590764 0.936307134 0.918730405 0.894988132 1.005616811 0.944867024 1 19.37026832 -7.769529749 24.99968607 0.981431436 0.930763354 0.316748668 0.037148113 242.7015942 749947.7228 0.019408482 0.009578469 1.70E-08 7.769529749 -0.050668082 YSPTLAS(ph)ETS(ph)PVPEARR ddPTM_A459_MK2206_30min_R1 1 YSPTLASETSPVPEARR 17 1 E9PMZ8;Q8IVF5;Q8IVF5-5;Q8IVF5-2 E9PMZ8 TIAM2 T-lymphoma invasion and metastasis-inducing protein 2 2 YSPTLAS(0.582)ET(0.419)S(0.999)PVPEARR 100.18 0.01509 4502600 1196.2 1253.9 978.35 964.44 1197.7 969.66 1053.4 1027.3 1035 952.64 TRUE FALSE 1094.456909 1172.270882 911.9423278 1038.721336 1149.993073 1024.561311 983.129608 1018.318424 1142.591954 1070.660235 1.022226167 1.094904661 0.851756979 0.970168968 1.074097118 0.956943461 0.918246121 0.951112585 1.06718445 1 10.06428501 YSPTS(ph)PK ddPTM_A459_MK2206_30min_R1 2 YSPTSPK 7 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.338)S(0.662)PK;YSPT(0.134)S(0.866)PK 117.81 0.011325 189638000 28172 35778 35313 30756 21907 20025.8 25690 26611 25441 27766 TRUE FALSE 25775.82346 33448.8457 32916.05195 33124.83245 21034.3978 21159.64349 23976.26697 26378.34283 28085.68299 31205.8617 0.825993004 1.071877009 1.054803494 1.061493919 0.674052779 0.67806631 0.768325746 0.845300895 0.900013057 1 14.92952943 -6.249650889 24.94346103 0.794448464 1.012084493 0.406440317 0.112771904 682.8065614 1444760.954 0.034063358 0.043612291 5.63E-07 6.249650889 0.217636029 YSPTS(ph)PK ddPTM_A459_MK2206_30min_R2 3 YSPTSPK 7 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.204)S(0.796)PK;YSPT(0.351)S(0.649)PK;YSPT(0.129)S(0.871)PK 106.68 0.017017 507364000 3335130 3351190 3422800 2868940 2888670 2400920 4013180 2910980 2686500 3593710 TRUE FALSE 3590470.117 3184774.778 3536914.444 2634538.425 2775246.301 2492288.693 3486244.645 3291455.081 2920166.914 3476447.537 1.032798591 0.916100342 1.017393303 0.757824876 0.798299492 0.716906746 1.002818138 0.946786927 0.8399859 1 21.72918239 -5.739841492 24.99957691 0.860528203 0.981497736 0.255898634 0.095292182 360.0219185 416722.4998 0.027024697 0.046753241 1.82E-06 5.739841492 0.120969533 YSPTS(ph)PTYSPT(ph)SPK ddPTM_A459_MK2206_30min_R2 1 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 YSPT(0.322)S(0.677)PT(0.001)Y(0.011)S(0.094)PT(0.891)S(0.003)PK 212.03 0.00053152 16119000 39296 47422 41463 40355 45902 29560 48558 37554 36720 46462 TRUE FALSE 42304.53197 45067.09244 42845.35573 37057.86741 44099.65684 30684.92651 42182.27627 42462.43674 39913.83923 44945.94875 0.94123126 1.00269532 0.953264019 0.824498502 0.981170897 0.682707282 0.9385112 0.944744475 0.888040866 1 15.45590346 -5.555048742 15.70040623 0.888608417 0.973467617 0.125235445 0.086612104 6.317980672 3082.111054 0.022901601 0.039682149 2.79E-06 5.555048742 0.084859201 YSPTS(ph)PTYSPTT(ph)PK ddPTM_A459_MK2206_30min_R2 1 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 YS(0.001)PT(0.323)S(0.675)PT(0.004)YS(0.015)PT(0.282)T(0.7)PK 115.83 0.034843 0 21890 24758 21605 26160 27037 17939 31827 23074 21020 29099 TRUE FALSE 23565.91523 23528.55372 22325.29992 24022.64432 25975.39153 18621.68122 27648.07667 26089.85102 22848.2816 28149.50201 0.83716988 0.835842627 0.793097509 0.853395002 0.922765579 0.661527909 0.982187062 0.926831708 0.811676228 1 14.78082178 -11.50776859 0.190991652 1.18935993 0.806294873 0.252355669 0.082132367 49.12093964 1.378226152 4.392793735 0.253928409 3.11E-12 11.50776859 -0.383065057 YSPTS(ph)PTYSPTTPK ddPTM_A459_MK2206_30min_R1 1 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.002)S(0.972)PT(0.025)YS(0.001)PTTPK 201.08 6.28E-05 41062000 5187 5809.6 5596.5 4870.4 4841.3 5090.3 6313.2 4797.2 5006.4 5239.1 TRUE FALSE 4745.818412 5431.393984 5216.625173 5245.519052 4648.460769 5378.508387 5892.057947 4755.258586 5526.833196 5888.159261 0.805993554 0.922426474 0.885951779 0.890858895 0.789459076 0.913444788 1.000662123 0.807596802 0.938635141 1 12.52360098 -6.976079281 24.9386616 0.925884739 0.864310503 0.253722628 0.062284483 385.8405128 402258.6896 0.021652363 0.019094801 1.06E-07 6.976079281 -0.061574236 YSPTS(ph)PTYSPTTPK ddPTM_A459_MK2206_30min_R2 4 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YS(0.022)PT(0.015)S(0.738)PT(0.221)YS(0.003)PT(0.001)TPK;YS(0.006)PT(0.11)S(0.673)PT(0.141)YS(0.06)PT(0.006)T(0.003)PK;YSPT(0.396)S(0.511)PT(0.017)YS(0.037)PT(0.035)T(0.004)PK;YSPT(0.064)S(0.931)PT(0.001)Y(0.002)SPT(0.002)TPK 139.64 0.00056902 197473000 567746 677784 689801 737267 665148 621641 816887 665539 649756 719735 TRUE FALSE 611213.0703 644126.2322 712798.6211 677029.9277 639030.9474 645297.9839 709628.7556 752527.2324 706270.6024 696250.1059 0.87786424 0.925136279 1.023768061 0.972394721 0.917818097 0.926819225 1.019215293 1.080828895 1.014392093 1 19.40924612 -7.355802426 4.913016856 1.037815847 0.944252936 0.522328277 0.04101816 0.193532871 7.642067144 0.018807685 0.01247191 4.41E-08 7.355802426 -0.09356291 YSPTSPT(ph)YSPTSPK ddPTM_A459_MK2206_30min_R2 2 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.001)S(0.001)PT(0.899)YS(0.099)PTSPK;YS(0.001)PT(0.101)S(0.101)PT(0.726)YS(0.069)PT(0.001)SPK 164.66 0.00060555 154213000 69214 74660 72314 82008 74511 60518 83013 58732 61193 68749 TRUE FALSE 74513.07706 70952.49297 74724.91267 75307.68407 71585.32375 62821.0549 72113.29338 66408.47406 66515.45653 66505.72576 1.120400931 1.066862923 1.123586155 1.13234888 1.076378356 0.944596186 1.084317065 0.998537694 1.000146315 1 16.02119093 -6.551097618 11.29852405 1.010322851 1.108056158 0.661001187 0.035811809 0.385250507 152.1905095 0.011455206 0.011481681 2.81E-07 6.551097618 0.097733307 YSPTSPT(ph)YSPTTPK ddPTM_A459_MK2206_30min_R1 1 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YS(0.001)PT(0.01)S(0.048)PT(0.395)YS(0.236)PT(0.305)T(0.006)PK 103.85 0.019483 0 1740.8 1736.2 1594.8 1407.5 1331.5 1280.1 1470.8 1446.5 1617.4 1415.6 TRUE FALSE 1592.735819 1623.173064 1486.549419 1515.905894 1278.463536 1352.578156 1372.685616 1433.853403 1785.534518 1590.975215 1.001106619 1.020237807 0.934363656 0.952815531 0.803572251 0.850156648 0.862795097 0.901241823 1.122289336 1 10.63569565 -10.99659875 9.705243969 1.000000535 0.931497621 0.035848334 0.088431376 1.08E-06 5.87E-08 0.090642318 0.02198382 1.01E-11 10.99659875 -0.068502913 YSPTSPTYS(ph)PTSPK ddPTM_A459_MK2206_30min_R1 4 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPTSPT(0.182)YS(0.818)PTSPK;YSPTSPT(0.018)YS(0.945)PT(0.033)S(0.005)PK;YS(0.001)PT(0.236)S(0.236)PT(0.049)YS(0.473)PT(0.004)SPK;YSPTSPT(0.052)YS(0.947)PTSPK 284.68 4.49E-55 179484000 21752 22579.1 21256.8 18819.1 17487.9 17217.6 19027.1 19516.3 19007.2 17431 TRUE FALSE 19901.87818 21109.19649 19813.94764 20268.55034 16791.31991 18192.44563 17757.83688 19345.67105 20983.06646 19590.48388 1.015895182 1.077522976 1.011406751 1.034612033 0.857116139 0.92863687 0.906452183 0.987503482 1.071084644 1 14.25786541 -6.065366831 24.9999513 0.95303177 1.036502023 0.301431792 0.056597266 241.7471521 92457.018 0.017558905 0.022668461 8.60E-07 6.065366831 0.083470253 YSPTSPTYS(ph)PTSPK ddPTM_A459_MK2206_30min_R2 2 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPTSPTYS(0.945)PT(0.046)S(0.008)PK;YSPTS(0.001)PT(0.224)YS(0.769)PT(0.006)SPK 212.43 2.79E-06 44405000 54054 66808 58118 63236 60941 56429 69110 51925 53819 56261 TRUE FALSE 58192.4158 63490.41187 60055.62511 58069.41652 58548.15014 58576.44514 60035.77398 58711.77579 58500.07934 54425.20818 1.069218065 1.166562591 1.103452373 1.066958096 1.075754271 1.076274159 1.103087632 1.078760702 1.074871026 1 15.7319874 -14.52287875 0.13774307 0.685485381 1.125538228 0.531162262 0.026782783 112.7818665 0.954783609 9.730736432 0.177837727 3.00E-15 14.52287875 0.440052847 YSPTSPTYSPT(ph)TPK ddPTM_A459_MK2206_30min_R1 2 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.001)S(0.016)PT(0.026)YS(0.179)PT(0.778)TPK;YSPTS(0.005)PT(0.037)Y(0.003)S(0.107)PT(0.772)T(0.076)PK 181.67 0.00017567 16226400 5517.7 6024.5 6347.9 4746.3 4590.9 4397.2 4894.2 5712.8 4868 5026.8 TRUE FALSE 5048.39064 5632.303955 5917.022234 5111.860848 4408.034732 4646.165664 4567.716848 5662.853592 5374.04602 5649.557934 0.893590383 0.996945959 1.047342518 0.904824927 0.780244186 0.822394552 0.808508719 1.002353398 0.951233014 1 12.46392227 -5.945130992 9.819143053 0.882408773 0.980500041 0.177381464 0.080463989 0.624126818 106.678089 0.024170829 0.035878063 1.13E-06 5.945130992 0.098091267 YSPTSPTYSPT(ph)TPK ddPTM_A459_MK2206_30min_R2 2 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPTS(0.001)PT(0.001)YS(0.018)PT(0.882)T(0.098)PK;YSPTSPTYSPT(0.924)T(0.076)PK 225.33 2.28E-09 11642800 60659 63580 64090 55929 56069 47419 68390 49777 45063 62404 TRUE FALSE 65303.09968 60422.70965 66226.72861 51359.42179 53867.44934 49223.56327 59410.31085 56283.02481 48982.49828 60367.76259 1.081754514 1.000910205 1.09705455 0.850775639 0.892321448 0.815394859 0.984139685 0.932335776 0.811401586 1 15.88149071 -5.761151989 24.99999945 0.895137442 1.054006817 0.571706498 0.064101534 5.439969437 473129.0043 0.017311551 0.027740365 1.73E-06 5.761151989 0.158869376 YSQANMDAPPLS(ph)PYPFVR ddPTM_A459_MK2206_30min_R1 1 YSQANMDAPPLSPYPFVR 18 0 Q08999 Q08999 RBL2 Retinoblastoma-like protein 2 1 YSQANMDAPPLS(1)PYPFVR 120.11 0.00096051 7912400 1522.4 1439.6 1405.6 1224.2 1558.8 1322.7 1249.8 1605.8 1084.6 772.92 TRUE FALSE 1392.911886 1345.881778 1310.191788 1318.488096 1496.709695 1397.590131 1166.428122 1591.76066 1197.348051 868.6751648 1.603489937 1.549349898 1.508264356 1.517814886 1.722979723 1.608875432 1.342766744 1.832400331 1.378361095 1 9.762672982 -8.534707063 23.34428294 0.999999994 1.578707399 0.680010734 0.123247259 407.620365 804477.1005 0.113208928 0.02923042 2.92E-09 8.534707063 0.578707406 YSQANMDAPPLS(ph)PYPFVR ddPTM_A459_MK2206_30min_R2 2 YSQANMDAPPLSPYPFVR 18 0 Q08999 Q08999 RBL2 Retinoblastoma-like protein 2 1 YSQANMDAPPLS(0.998)PY(0.002)PFVR;YSQANMDAPPLS(1)PYPFVR 178.23 1.85E-09 7682700 22821 27904 25788 27291 30165 27613 24513 21490.6 26829 23433 TRUE FALSE 24568.19331 26518.32794 26647.75905 25061.238 28980.57053 28663.83206 21294.41365 24299.49521 29162.53792 22668.38313 1.083808808 1.169837645 1.175547409 1.105559133 1.278457769 1.264485072 0.93938829 1.071955378 1.286485135 1 14.46839387 -10.59133543 5.037517789 0.999996937 1.15093543 0.16523017 0.102979254 3.65E-06 6.75E-07 0.102725069 0.024913984 2.56E-11 10.59133543 0.150938493 YSQSAPGS(ph)PVSAQPVIMAVPPRPSSLVAK ddPTM_A459_MK2206_30min_R1 1 YSQSAPGSPVSAQPVIMAVPPRPSSLVAK 29 1 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 YSQS(0.001)APGS(0.499)PVS(0.499)AQPVIMAVPPRPSSLVAK 73.072 0.0054829 0 511.59 564.96 475.66 443.58 409.86 557.37 808.43 507.4 737.22 687.84 TRUE FALSE 468.076584 528.1810013 443.3735245 477.7446085 393.5344083 588.9278077 754.5011098 502.9638553 813.8566572 773.0548121 0.605489516 0.683238747 0.573534396 0.617995776 0.509064043 0.761818953 0.9759995 0.65061862 1.052780016 1 9.594426899 -6.980877441 5.128074154 0.889167987 0.603467999 0.6533177 0.109639864 0.118948934 8.828664321 0.038252231 0.0324843 1.05E-07 6.980877441 -0.285699988 YSQSAPGS(ph)PVSAQPVIMAVPPRPSSLVAK ddPTM_A459_MK2206_30min_R2 2 YSQSAPGSPVSAQPVIMAVPPRPSSLVAK 29 1 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 Y(0.001)S(0.001)QS(0.011)APGS(0.568)PVS(0.419)AQPVIMAVPPRPSSLVAK;Y(0.001)S(0.001)QS(0.003)APGS(0.558)PVS(0.438)AQPVIMAVPPRPSSLVAK 89.565 1.37E-06 18298800 64564 64099 55068 62484 56608 53901 84632 84224 67227 97284 TRUE FALSE 69507.06948 60915.93687 56903.93964 57378.85732 54385.28549 55952.24033 73519.71674 95232.36598 73074.28294 94109.63105 0.738575518 0.647286959 0.604655857 0.609702287 0.577892878 0.594543191 0.781213526 1.011930075 0.776480389 1 16.52205475 -7.490519811 3.877302219 0.920123828 0.626797876 0.77261812 0.073187958 0.10213059 3.314053895 0.033689177 0.020438614 3.23E-08 7.490519811 -0.293325952 YSQSAPGSPVS(ph)AQPVIMAVPPRPSSLVAK ddPTM_A459_MK2206_30min_R1 1 YSQSAPGSPVSAQPVIMAVPPRPSSLVAK 29 1 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 YSQS(0.018)APGS(0.226)PVS(0.755)AQPVIMAVPPRPSSLVAK 85.595 2.40E-06 11350000 1042.6 1020.4 1131.8 656.65 808.09 1166.5 1473.2 1392.8 1986.9 2087.6 TRUE FALSE 953.9213951 953.9717745 1054.976569 707.2252968 775.9020641 1232.546222 1374.925516 1380.622896 2193.445365 2346.227649 0.406576657 0.40659813 0.449648 0.301430808 0.330701952 0.525331045 0.586015392 0.588443708 0.934881731 1 11.19612729 -8.037866207 0.928879181 1.01808135 0.386515832 0.913939236 0.066575074 0.148995315 0.246862951 0.064313711 0.024287662 9.17E-09 8.037866207 -0.631565518 down YSS(ph)DDTLDR ddPTM_A459_MK2206_30min_R2 2 YSSDDTLDR 9 0 O95171-3;O95171-2;O95171;F2Z2X8 O95171-3 SCEL Sciellin 1 YS(0.085)S(0.913)DDT(0.002)LDR;YS(0.146)S(0.848)DDT(0.006)LDR 161.51 0.00092557 15675500 64480 94948 65548 80166 87477 146716 78012 74051 93053 66049 TRUE FALSE 69416.63838 90233.02039 67733.3376 73616.18136 84042.21344 152299.3802 67768.93069 83729.71996 101146.5817 63893.82654 1.086437331 1.412233783 1.060092051 1.152164229 1.315341685 2.383632167 1.060649117 1.31045086 1.583041543 1 15.96338892 -6.530324395 24.99998915 1.504632937 1.192038249 0.117573797 0.367002402 374.164383 1256308.408 0.120633844 0.120868325 2.95E-07 6.530324395 -0.312594688 YSS(ph)PPASTTR ddPTM_A459_MK2206_30min_R1 1 YSSPPASTTR 10 0 Q08999;F5H837 Q08999 RBL2 Retinoblastoma-like protein 2 1 YS(0.062)S(0.938)PPASTTR 187.16 0.00018797 18346000 9246.8 8147.2 8138.6 6680.7 9131.7 8476.7 8417.8 7700.9 7525.7 7306.4 TRUE FALSE 8460.311103 7616.815799 7586.174507 7195.248672 8767.965052 8956.643429 7856.263921 7633.571843 8308.023446 8211.571993 1.03029129 0.92757097 0.923839493 0.876232794 1.067757192 1.090734324 0.95673081 0.92961151 1.011745796 1 13.00344272 -4.711385706 22.12494773 0.974924234 1.030294904 0.060496268 0.064024046 12219.05064 5399266.386 0.017364663 11.08362657 1.94E-05 4.711385706 0.05537067 YSS(ph)PTAGSAK ddPTM_A459_MK2206_30min_R1 3 YSSPTAGSAK 10 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 YS(0.011)S(0.969)PT(0.02)AGSAK;YS(0.072)S(0.716)PT(0.207)AGS(0.005)AK;YS(0.005)S(0.979)PT(0.017)AGSAK 184.36 0.00012575 186959000 34120 32383.2 33594 29150.1 28448.6 24740.7 30169.6 30868.4 13969.7 23644.9 TRUE FALSE 31217.91483 30275.04779 31313.73288 31395.24575 27315.43202 26141.49705 28157.04103 30598.52083 15421.90031 26574.20872 1.17474485 1.139264319 1.178350528 1.181417896 1.027892582 0.983716856 1.059562726 1.151436762 0.580333378 1 14.69773911 -7.201778205 0.64857327 0.88163703 1.172975816 0.373224734 0.136108655 0.85827194 0.733642324 0.116088721 0.084370997 6.28E-08 7.201778205 0.291338785 YSS(ph)PTAGSAK ddPTM_A459_MK2206_30min_R2 3 YSSPTAGSAK 10 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 YS(0.013)S(0.924)PT(0.061)AGS(0.001)AK;YS(0.003)S(0.985)PT(0.012)AGSAK;YS(0.003)S(0.947)PT(0.05)AGSAK 130.01 0.0028521 125494600 239448 287772 265219 278758 291684 243736 299488 227692 242015 258972 TRUE FALSE 257780.323 273481.6609 274061.2691 255982.5797 280231.0206 253011.5443 260164.8659 257452.1262 263065.0272 250521.7648 1.028973763 1.091648309 1.093961913 1.021797766 1.118589519 1.009938376 1.038492069 1.02766371 1.050068554 1 17.93457642 -6.791612863 24.99999141 1.027790241 1.070684607 0.363533865 0.030179088 237.5072598 196783.1949 0.010117138 0.008923711 1.62E-07 6.791612863 0.042894367 YSS(ph)QDADEQDWEFQKR ddPTM_A459_MK2206_30min_R2 2 YSSQDADEQDWEFQKR 16 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 YS(0.145)S(0.855)QDADEQDWEFQKR;Y(0.003)S(0.187)S(0.81)QDADEQDWEFQKR 127.37 0.00053582 16489800 23291.3 33011 29403 36340 34897 25824 29038 24474 29227 26333 TRUE FALSE 25074.49984 31371.72174 30383.28134 33370.90575 33526.76844 26806.75042 25225.27572 27672.83583 31769.11163 25473.75637 0.984326751 1.231531043 1.19272874 1.310011185 1.316129744 1.052328131 0.990245622 1.086327255 1.247131015 1 14.6367241 -6.784435495 24.98218677 1.075291764 1.213247434 0.270988658 0.107790328 326.8626199 355089.7028 0.039285423 0.034668873 1.64E-07 6.784435495 0.137955669 YSS(ph)SQPEPR ddPTM_A459_MK2206_30min_R2 1 YSSSQPEPR 9 0 E7EPP6;O14757-2;O14757-3;O14757 E7EPP6 CHEK1 Serine/threonine-protein kinase Chk1 1 YS(0.028)S(0.486)S(0.486)QPEPR 86.189 0.034176 4268300 32826 31984 24681 24416 19652 26718 26890 27181 22738 20153 TRUE FALSE 35339.1838 30395.72107 25503.85222 22421.1347 18880.36374 27734.77221 23359.3107 30733.65003 24715.71014 19495.40926 1.812692585 1.559121979 1.308197837 1.150072532 0.968451777 1.42263093 1.198195451 1.57645575 1.267770777 1 14.25084682 -5.036067977 2.08557895 1.245680334 1.838752651 0.549969084 0.17082006 0.344898687 2.410329337 0.048222222 0.318252255 9.20E-06 5.036067977 0.593072317 YSS(ph)YQGSR ddPTM_A459_MK2206_30min_R1 3 YSSYQGSR 8 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 YS(0.042)S(0.958)YQGSR;YS(0.05)S(0.95)YQGSR;YS(0.042)S(0.958)YQGSR 131.12 0.0036497 21442000 10312.1 9184.4 9752.1 8201.6 12738.1 11303.6 12103.9 9869.1 5276.4 6753.6 TRUE FALSE 9435.001744 8586.493891 9090.154623 8833.288653 12230.7145 11943.60006 11296.47092 9782.815499 5824.900662 7590.286955 1.243036238 1.131247599 1.197603553 1.163762148 1.611363915 1.573537356 1.488279822 1.28885977 0.767415079 1 12.88993871 -8.193130155 5.977283289 0.885994182 1.34431276 0.538032296 0.168301559 0.176114565 11.69680469 0.135336266 0.049105109 6.41E-09 8.193130155 0.458318577 YSS(ph)YQGSR ddPTM_A459_MK2206_30min_R2 3 YSSYQGSR 8 0 Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-3;Q8TEW0-5 Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 YS(0.045)S(0.955)YQGSR;YS(0.045)S(0.955)YQGSR;YS(0.047)S(0.953)YQGSR 117.71 0.0087284 26302600 103695 129081 131547 135315 127050 134484 125846 91472 121357 91639 TRUE FALSE 111633.9689 122671.0252 135932.7113 124259.3316 122061.3786 139601.8829 109322.269 103427.7045 131912.4125 88648.82693 1.259283092 1.383786221 1.533384209 1.401703056 1.376909124 1.57477417 1.233206042 1.166712613 1.488033368 1 16.43581392 -10.44378304 0.348605587 0.829108753 1.414781545 0.448497303 0.125378248 12.39657272 1.202529592 2.292281124 0.106692105 3.60E-11 10.44378304 0.585672792 YSSEVAT(ph)ESPLDFTK ddPTM_A459_MK2206_30min_R1 1 YSSEVATESPLDFTK 15 0 Q8WTT2 Q8WTT2 NOC3L Nucleolar complex protein 3 homolog 1 Y(0.003)S(0.007)S(0.164)EVAT(0.585)ES(0.189)PLDFT(0.053)K 95.755 0.024823 3714400 1694.4 1976.4 2217.6 1696.7 1884.6 1856.7 1849.4 2108.6 2150.4 1989.4 TRUE FALSE 1550.282382 1847.736001 2067.075491 1827.380128 1809.532391 1961.824749 1726.0299 2090.164733 2373.941775 2235.861891 0.693371263 0.826408826 0.924509469 0.817304564 0.809322078 0.877435568 0.771975186 0.934836244 1.061756893 1 11.12661536 -7.983384038 4.182060134 1.025378243 0.824114711 0.679122396 0.059421087 0.122265784 4.955137985 0.03872659 0.01591296 1.04E-08 7.983384038 -0.201263532 YSTAKNANFY(ph)LQAGS(ph)AFAEMK ddPTM_A459_MK2206_30min_R1 1 YSTAKNANFYLQAGSAFAEMK 21 1 I3L1D5;O15296-2;O15296-3;O15296-4;O15296 I3L1D5 ALOX15B Arachidonate 15-lipoxygenase B 2 Y(0.003)S(0.001)TAKNANFY(0.995)LQAGS(1)AFAEMK 54.658 0.0465 0 192.44 541.87 397.34 458.42 516.24 435.98 460.65 604.54 378.95 334.16 TRUE FALSE 176.0719675 506.5941645 370.3696679 493.7275878 495.6770676 460.6648108 429.920879 599.2545705 418.3432086 375.5582636 0.468827302 1.348909646 0.986184312 1.314649778 1.319840663 1.226613433 1.144751483 1.595636759 1.113923588 1 8.552892933 -4.756591812 24.97645236 1.241850191 0.46882611 0.634312412 0.172595244 89.70698539 462148.8434 0.040872697 0.326406975 1.75E-05 4.756591812 -0.773024081 YSTPTYTGGQSESHVQS(ph)ASEDTVTER ddPTM_A459_MK2206_30min_R1 1 YSTPTYTGGQSESHVQSASEDTVTER 26 0 Q7Z2T5 Q7Z2T5 TRMT1L TRMT1-like protein 1 YSTPTYTGGQSES(0.007)HVQS(0.906)AS(0.085)EDT(0.002)VTER 134.98 3.09E-09 4015000 444.74 485.61 374.02 374.04 597.12 600.2 507.7 555.11 420.22 313.83 TRUE FALSE 406.9125276 453.9967007 348.6325645 402.8486256 573.335446 634.1828053 473.8322594 550.2567318 463.9033728 352.7096297 1.153675696 1.287168431 0.988440732 1.142153748 1.625516849 1.798030878 1.343406075 1.560084232 1.315255762 1 8.462337155 -6.244632741 23.43594346 1.481420118 1.142137407 0.309982488 0.212228158 392.1083412 546772.3267 0.061404763 0.079000736 5.69E-07 6.244632741 -0.339282711 YSTPTYTGGQSESHVQS(ph)ASEDTVTER ddPTM_A459_MK2206_30min_R2 1 YSTPTYTGGQSESHVQSASEDTVTER 26 0 Q7Z2T5 Q7Z2T5 TRMT1L TRMT1-like protein 1 YSTPTY(0.001)T(0.001)GGQS(0.003)ES(0.009)HVQS(0.685)AS(0.28)EDT(0.019)VT(0.002)ER 56.977 0.006107 4168200 5272 5001.4 6725 5498.4 8257.9 8558.5 6601.5 4931.4 8335.9 5948.1 TRUE FALSE 5675.628373 4753.037749 6949.208144 5049.163131 7933.653353 8884.199715 5734.71512 5575.950912 9060.941514 5754.013984 0.98637723 0.826038616 1.207714851 0.877502756 1.37880328 1.544000369 0.996646017 0.969054112 1.574716631 1 12.49035301 -6.257362408 24.97286575 1.244968087 0.980475272 0.258281733 0.223605617 527.8644345 3233351.467 0.068015813 0.084644683 5.53E-07 6.257362408 -0.264492815 YSTPTYTGGQSESHVQSAS(ph)EDTVTER ddPTM_A459_MK2206_30min_R1 1 YSTPTYTGGQSESHVQSASEDTVTER 26 0 Q7Z2T5 Q7Z2T5 TRMT1L TRMT1-like protein 1 YSTPTYTGGQSES(0.001)HVQS(0.273)AS(0.712)EDT(0.013)VT(0.001)ER 106.66 3.72E-05 0 433.81 370.22 303.37 266.65 424.96 340.98 311.09 417.7 218.4 205.61 TRUE FALSE 396.9121815 346.1186107 282.7780896 287.1874292 408.0329433 360.2859929 290.3377537 414.0480929 241.1034616 231.0825191 1.717620974 1.497813907 1.223710434 1.242791667 1.765745609 1.559122665 1.256424566 1.791775919 1.043365212 1 7.852264317 -8.366381592 7.725351825 1.007099035 1.489958305 0.47700644 0.202704959 0.271102116 17.52876453 0.197304292 0.051035331 4.30E-09 8.366381592 0.482859271 YSVGSLS(ph)PVSASVLK ddPTM_A459_MK2206_30min_R2 2 YSVGSLSPVSASVLK 15 0 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 YSVGS(0.286)LS(0.711)PVS(0.002)ASVLK;YSVGS(0.341)LS(0.545)PVS(0.11)AS(0.004)VLK 122.12 0.0015961 34100000 109114 114793 119982 124546 132810 115011 140241 111252 110171 132985 TRUE FALSE 117467.8517 109092.5465 123982.14 114370.1934 127595.2121 119387.8242 121827.1882 125793.0184 119753.4744 128645.7103 0.913111299 0.84800765 0.96374873 0.889032313 0.991834176 0.928035796 0.946997672 0.977825207 0.9308781 1 16.97304383 -1.522878745 0.169540778 0.994703419 0.538950445 0.390627293 0.035196556 57.73427588 0.623697078 0.08618274 6.667547367 0.03 1.522878745 -0.455752973 YSVGSLS(ph)PVSASVLKK ddPTM_A459_MK2206_30min_R2 1 YSVGSLSPVSASVLKK 16 1 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 Y(0.021)S(0.006)VGS(0.267)LS(0.699)PVS(0.007)ASVLKK 60.09 0.038073 4374900 19466 24005 29281 25891 26552 24376 26133 23171 30242 22413 TRUE FALSE 20956.33193 22812.94661 30257.21393 23775.62248 25509.43507 25303.64576 22701.70571 26199.52926 32872.39449 21681.66565 0.966546218 1.052176847 1.395520733 1.096577305 1.176544066 1.167052669 1.047046204 1.208372534 1.516137876 1 14.40418797 -8.003022311 24.97518126 1.292797689 1.137417221 0.091903171 0.158409456 217.4411018 1796832.015 0.085862569 0.040009712 9.93E-09 8.003022311 -0.155380467 YSVLNNDDYFADVS(ph)PLR ddPTM_A459_MK2206_30min_R1 2 YSVLNNDDYFADVSPLR 17 0 Q1ED39;H3BMC9 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR 267.6 1.87E-51 43540000 2582.7 2146.72 2400.64 1887.06 2333.54 2119.67 2456.22 2222.69 2388.2 2160.61 TRUE FALSE 2363.027803 2006.968138 2237.691245 2032.401688 2240.59016 2239.683884 2292.370045 2203.257256 2636.461936 2428.282679 0.97312715 0.826496913 0.921511843 0.836970797 0.922705655 0.922332438 0.94402932 0.907331455 1.085731064 1 11.24572066 -8.249040877 24.00459317 1.042865523 0.904585445 0.578660954 0.04640646 255.0054124 493716.8805 0.030588956 0.011355767 5.64E-09 8.249040877 -0.138280077 YSVLNNDDYFADVS(ph)PLR ddPTM_A459_MK2206_30min_R2 7 YSVLNNDDYFADVSPLR 17 0 Q1ED39;H3BMC9 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR 203.17 2.91E-08 14927300 82297 94398.7 83891.2 102533.3 86647.3 96539 101205.5 70240.4 75777.7 91065 TRUE FALSE 88597.7216 89710.99783 86688.09074 94156.0014 83245.09163 100212.8593 87917.09628 79421.06145 82368.70737 88093.55651 1.005723064 1.018360495 0.98404576 1.068818256 0.944962321 1.13757309 0.9979969 0.901553582 0.935013986 1 16.42674888 -7.563289971 8.381175254 0.940470559 1.026209852 0.316803504 0.053074487 0.288866166 53.39352992 0.023929098 0.013816892 2.73E-08 7.563289971 0.085739293 YSVQTADHR ddPTM_A459_MK2206_30min_R1 4 YSVQTADHR 9 0 Q16658 Q16658 FSCN1 Fascin 0 ;;; 201.61 0.00098885 39881600 25644.6 23834.1 26895.5 22325.7 30215.1 28173.9 29424.8 26463.4 20729.8 19804.3 FALSE TRUE 23463.3921 22282.49576 25069.9084 24045.22928 29011.56859 29769.08187 27461.92528 26232.03328 22884.73689 22257.8062 1.054164633 1.001109254 1.12634229 1.080305447 1.303433426 1.337467026 1.233810962 1.178554304 1.028166778 1 14.44202378 -6.102007638 7.838237261 1.199657885 1.062515296 0.214283228 0.104198888 0.401470302 27.4847425 0.031989787 0.041438628 7.91E-07 6.102007638 -0.137142589 YSVQTADHR ddPTM_A459_MK2206_30min_R2 4 YSVQTADHR 9 0 Q16658 Q16658 FSCN1 Fascin 0 ;;; 142.98 0.0029123 34545100 326451 412531 371377 446104 405307 430540 404777 333484 402660 374804 FALSE TRUE 351444.3396 392045.3104 383758.5238 409655.8762 389392.6107 446924.5014 351629.2937 377071.5038 437682.639 362574.1762 0.969303284 1.081283048 1.058427624 1.129853981 1.073966753 1.232642948 0.969813398 1.039984446 1.207153371 1 18.46791665 -4.002396866 1.431978826 1.093032667 0.276698497 0.168330302 0.078826004 17.49002234 6.194246836 0.021744379 35.09996438 9.94E-05 4.002396866 -0.81633417 YTEDMTPTEQT(ph)PR ddPTM_A459_MK2206_30min_R2 2 YTEDMTPTEQTPR 13 0 A0A1X7SBR1;Q7Z3G6 A0A1X7SBR1 PRICKLE2 Prickle-like protein 2 1 YTEDMTPTEQT(1)PR;YTEDMTPT(0.001)EQT(0.998)PR 145.49 0.0014633 7113600 24094 28148 26810 28167 24674 31082 27110 19484.5 25408 28134 TRUE FALSE 25938.65517 26750.21125 27703.83202 25865.666 23705.17478 32264.84729 23550.42444 22031.19105 27617.94191 27215.98988 0.953066755 0.982885846 1.017924835 0.950384906 0.871001749 1.185510703 0.86531574 0.809494387 1.014768966 1 14.73216689 YTGEDFDEDLR ddPTM_A459_MK2206_30min_R1 1 YTGEDFDEDLR 11 0 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 119.22 0.046718 0 1712.3 1493.9 1498.9 1374.8 1548.6 1524.7 1668.9 1279.8 1494.2 1433.7 FALSE TRUE 1566.659893 1396.646838 1397.158844 1480.687334 1486.915983 1611.027196 1557.570726 1268.610844 1649.527437 1611.31758 0.972284988 0.866773165 0.867090921 0.918929547 0.92279511 0.999819785 0.966644158 0.787312731 1.023713424 1 10.65402515 -6.246438515 2.952110872 0.943661538 0.898887149 0.090417272 0.067514247 0.747287237 13.17801232 0.021660422 0.027383826 5.67E-07 6.246438515 -0.044774388 YTGEEDGAGGHS(ph)PAPPQTEECLR ddPTM_A459_MK2206_30min_R1 4 YTGEEDGAGGHSPAPPQTEECLR 23 0 J3KS37;O94762-4;O94762;J3KSV9 J3KS37 RECQL5 ATP-dependent DNA helicase Q5 1 YTGEEDGAGGHS(1)PAPPQTEECLR;YTGEEDGAGGHS(1)PAPPQTEECLR;YTGEEDGAGGHS(1)PAPPQTEECLR;YTGEEDGAGGHS(1)PAPPQTEECLR 136.22 3.40E-06 100511000 7432.88 8062.7 7776.2 6392.41 7545.5 7713 8134.5 6777.71 6920.03 6398.46 TRUE FALSE 6800.674524 7537.816765 7248.37321 6884.754526 7244.946757 8149.703395 7591.862347 6718.453196 7639.391882 7191.149531 0.945700614 1.048207485 1.007957515 0.957392764 1.007481033 1.133296333 1.055723054 0.93426693 1.062332503 1 12.81200669 -6.536782891 24.98286565 1.038201313 0.993675848 0.146476512 0.05384221 516.1739871 927451.2564 0.018439426 0.018448241 2.91E-07 6.536782891 -0.044525465 YTGEEDGAGGHS(ph)PAPPQTEECLR ddPTM_A459_MK2206_30min_R2 1 YTGEEDGAGGHSPAPPQTEECLR 23 0 J3KS37;O94762-4;O94762;J3KSV9 J3KS37 RECQL5 ATP-dependent DNA helicase Q5 1 Y(0.002)T(0.002)GEEDGAGGHS(0.996)PAPPQTEECLR 79.163 0.00043241 35255000 29178 41710 29210 40068 35644 37391 40774 28830 34731 26814 TRUE FALSE 31411.89011 39638.74205 30183.84682 36794.31623 34244.43746 38813.94071 35420.32482 32598.17999 37751.8396 25939.06138 1.210987925 1.528148667 1.163644528 1.418490658 1.320187996 1.496351011 1.365520684 1.256721649 1.455404999 1 14.66283866 -10.71756838 4.893277985 0.999959862 1.358689398 0.464568723 0.115057348 4.75E-05 7.82E-06 0.102584861 0.024877637 1.92E-11 10.71756838 0.358729536 YTIGDIFVHS(ph)PQR ddPTM_A459_MK2206_30min_R2 2 YTIGDIFVHSPQR 13 0 Q9P2F8 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 YTIGDIFVHS(1)PQR;YTIGDIFVHS(1)PQR 110.32 0.0037272 2314000 20739.1 24813 20959.5 25059 29297 27816 25945.7 21379.4 22108.4 23549 TRUE FALSE 22326.90144 23580.8225 21658.27927 23011.59954 28146.65257 28874.55737 22538.99842 24173.76099 24031.34867 22780.59806 0.980084078 1.035127455 0.950733568 1.010140273 1.235553716 1.267506555 0.9893945 1.061155678 1.054904204 1 14.475518 -6.029071265 24.58720732 1.108604318 0.991153022 0.266610938 0.08729091 786.0294864 664788.4465 0.027642606 0.035758908 9.35E-07 6.029071265 -0.117451296 YTIS(ph)QEAYDQR ddPTM_A459_MK2206_30min_R2 2 YTISQEAYDQR 11 0 K7EK42;A0A494C0X0;Q99426;K7EP07;Q99426-2 K7EK42 TBCB Tubulin-folding cofactor B 1 YT(0.002)IS(0.998)QEAYDQR;YT(0.006)IS(0.994)QEAYDQR 104.81 0.012059 15752500 63301 56866 52271 68927 56083 48674 48305 36573 44672 62765 TRUE FALSE 68147.37323 54042.11713 54013.68905 63295.44361 53880.89963 50526.32318 41962.49548 41353.21667 48557.48981 60716.98319 1.122377458 0.890065914 0.889597707 1.042466873 0.887410685 0.832161292 0.691116279 0.681081544 0.799734889 1 15.88981249 -6.705108373 2.420189836 0.767692673 0.971815145 0.388831644 0.105940316 0.27426442 3.288355619 0.038791381 0.037137311 1.97E-07 6.705108373 0.204122472 YTPAS(ph)PSSPDFTTWSCAK ddPTM_A459_MK2206_30min_R2 1 YTPASPSSPDFTTWSCAK 18 0 A0A1B0GVE3;O75808-2;O75808 A0A1B0GVE3 CAPN15 Calpain-15 1 YTPAS(0.951)PS(0.049)SPDFTTWSCAK 178.02 9.68E-10 0 13234 16371 13218 15518 16524 11136 13469 11217 12659 13398 TRUE FALSE 14247.20522 15558.03995 13658.68152 14250.12976 15875.18473 11559.78828 11700.50412 12683.10041 13760.05694 12960.82436 1.099251469 1.200389691 1.053843579 1.099477114 1.224859183 0.891902241 0.902759253 0.978572046 1.061665258 1 13.66186986 -6.766040562 24.99999962 0.961626727 1.132620751 0.630036369 0.064507917 79.06594966 429592.4615 0.023079737 0.021020432 1.71E-07 6.766040562 0.170994024 YTPPTQPPIS(ph)PPYQEACTLK ddPTM_A459_MK2206_30min_R2 2 YTPPTQPPISPPYQEACTLK 20 0 B7Z4K4;Q9UET6-2;Q9UET6 B7Z4K4 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase 1 YTPPT(0.028)QPPIS(0.959)PPY(0.011)QEACTLK;YTPPT(0.003)QPPIS(0.965)PPY(0.031)QEACT(0.001)LK 101.49 0.00046108 9700600 81724 98025 85491 104280 84332 89084 87094 70733 65203 83012 TRUE FALSE 87980.85228 93157.22104 88341.22727 95759.99042 81020.70195 92474.15404 75658.45318 79978.04596 70874.23908 80303.32524 1.095606589 1.160066794 1.100094261 1.19247852 1.008933338 1.151560708 0.942158409 0.995949367 0.882581622 1 16.29317211 -7.266003746 24.99165316 0.954834788 1.117626981 0.677937457 0.055021369 223.7713378 1225226.044 0.021348394 0.014952334 5.42E-08 7.266003746 0.162792193 YTPPTQPPIS(ph)PPYQEACTLKR ddPTM_A459_MK2206_30min_R1 1 YTPPTQPPISPPYQEACTLKR 21 1 B7Z4K4;Q9UET6-2;Q9UET6 B7Z4K4 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase 1 Y(0.003)T(0.003)PPT(0.357)QPPIS(0.636)PPYQEACTLKR 83.09 0.00073469 20587000 2102.2 1925.5 2082.2 1774.6 1752.3 1492.3 1521.5 1877.2 1208.8 1022.1 TRUE FALSE 1923.396851 1800.1496 1940.866065 1911.279999 1682.50218 1576.792736 1420.003511 1860.787838 1334.459086 1148.725464 1.674374696 1.567084265 1.689582172 1.663826614 1.464668655 1.37264541 1.236155683 1.619871672 1.161686693 1 10.16581833 -8.024893911 0.188764457 0.815986845 1.867410258 0.716769254 0.122904892 1.767745181 0.34679053 0.779107058 0.739843672 9.44E-09 8.024893911 1.051423413 YTPPTQPPIS(ph)PPYQEACTLKR ddPTM_A459_MK2206_30min_R2 1 YTPPTQPPISPPYQEACTLKR 21 1 B7Z4K4;Q9UET6-2;Q9UET6 B7Z4K4 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase 1 YTPPT(0.005)QPPIS(0.993)PPYQEACT(0.002)LKR 55.985 0.015982 10656000 20671 21599 22484 23480 23556 21786 21887 15227 21084 21044 TRUE FALSE 22253.58765 20526.42507 23233.60534 21561.60889 22631.07308 22615.0815 19013.21061 17217.22118 22917.84821 20357.336 1.09314832 1.008306051 1.141289083 1.059156703 1.111691288 1.110905744 0.933973414 0.845750209 1.125778354 1 14.31326116 -7.260097523 24.99341656 0.963521342 1.086087943 0.350699102 0.073174406 124.0216061 2310049.948 0.028156725 0.020605902 5.49E-08 7.260097523 0.1225666 YTPSGQAGAAASESLFVS(ph)NHAY ddPTM_A459_MK2206_30min_R1 1 YTPSGQAGAAASESLFVSNHAY 22 0 P04075;P04075-2;J3KPS3;H3BR68 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 YTPSGQAGAAASES(0.001)LFVS(0.999)NHAY 168.83 8.10E-13 0 468.19 432.18 484.19 421.06 492.34 597.41 378.91 363.94 280.53 255.66 TRUE FALSE 428.3679819 404.0450034 451.3245318 453.4901142 472.7290553 631.2348379 353.6336053 360.7581109 309.6920974 287.3330909 1.490841102 1.406190293 1.570736355 1.57827319 1.645230119 2.196874839 1.230744444 1.255539728 1.077815633 1 8.166580341 -7.495001955 24.91674165 1.148634857 1.637186995 0.589008992 0.208450145 535.5252205 478662.8282 0.0921913 0.061985731 3.20E-08 7.495001955 0.488552138 YTPSGQAGAAASESLFVS(ph)NHAY ddPTM_A459_MK2206_30min_R2 2 YTPSGQAGAAASESLFVSNHAY 22 0 P04075;P04075-2;J3KPS3;H3BR68 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 YTPSGQAGAAASESLFVS(0.998)NHAY(0.002);YTPSGQAGAAASESLFVS(1)NHAY 147.93 4.01E-08 3365800 14241.8 20291.1 14595.7 20344.3 21614 21406.3 19794.2 14592.8 17642.1 16971.4 TRUE FALSE 15332.16316 19283.47348 15082.31335 18682.10561 20765.32576 22220.93175 17195.19776 16500.12906 19176.57797 16417.62461 0.933884379 1.174559289 0.918665989 1.137929881 1.264819135 1.353480316 1.047362099 1.005025359 1.168048267 1 14.00295778 -1.570551201 18.72552003 1.108699061 0.005490872 0 0.136383418 0 0 0.032352943 0 0.026881209 1.570551201 -1.103208189 YTPTSPSYSPSS(ph)PEYTPTSPK ddPTM_A459_MK2206_30min_R1 1 YTPTSPSYSPSSPEYTPTSPK 21 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YTPTS(0.002)PS(0.003)YS(0.009)PS(0.166)S(0.819)PEY(0.001)TPTSPK 115.5 5.10E-05 6792500 1956.8 1867.4 1791.4 1551.8 1969.6 1754.6 1689 1715 1537.2 1323.3 TRUE FALSE 1790.363884 1745.831921 1669.804759 1671.319905 1891.146661 1853.943936 1576.329892 1700.005936 1696.997441 1487.240394 1.203816068 1.173873388 1.12275377 1.123772533 1.271581022 1.246566421 1.059902554 1.143060626 1.141037755 1 10.53842215 -9.020968235 0.583886299 0.995427211 1.179630493 0.457355229 0.056932069 1.79505194 1.075010018 0.083855388 0.027047758 9.53E-10 9.020968235 0.184203282 YTPTSPSYSPSSPEYTPT(ph)SPK ddPTM_A459_MK2206_30min_R1 1 YTPTSPSYSPSSPEYTPTSPK 21 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YTPTSPSYSPSS(0.001)PEY(0.02)T(0.122)PT(0.65)S(0.207)PK 95.742 0.00055291 6245100 1058.9 1356.3 1458.4 1177.7 951.38 851.5 893.03 952.52 1056.4 1017.7 TRUE FALSE 968.8349945 1268.004623 1359.407871 1268.406658 913.48452 899.7111941 833.4575981 944.1922181 1166.21656 1143.780359 0.847046364 1.108608496 1.188521782 1.108959992 0.798653791 0.786611859 0.728686755 0.825501339 1.01961583 1 10.15959432 -6.260141955 24.99550761 0.84090043 1.075467163 0.404835383 0.119159755 108.4477666 2089296.484 0.0369405 0.045107247 5.49E-07 6.260141955 0.234566733 YTQVGPDHNR ddPTM_A459_MK2206_30min_R1 3 YTQVGPDHNR 10 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ;; 160.18 0.00062713 19487900 14097.6 13070.1 16091.4 12685.5 15969.2 14381.4 16476.3 14693.7 10634 12929.5 FALSE TRUE 12898.52509 12219.23411 14999.1606 13662.53941 15333.11295 15195.66244 15377.19609 14565.23453 11739.44235 14531.30407 0.887637133 0.840890401 1.032196458 0.940214267 1.05517804 1.045719115 1.058211707 1.002334991 0.807872597 1 13.82687656 -5.258437461 24.91735874 0.997387131 0.864263757 0.340055152 0.0713411 267.8330278 2223110.274 0.01869862 0.04521435 5.52E-06 5.258437461 -0.133123374 YTQVGPDHNR ddPTM_A459_MK2206_30min_R2 4 YTQVGPDHNR 10 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ;;; 149.33 0.001057 17578600 156635 203941 167885 215383 204102 214676 204919 167061 200141 184783 FALSE TRUE 168627.096 193813.5865 173482.2021 197785.5199 196087.9299 222845.6456 178012.8891 188896.4463 217548.9024 178753.5458 0.943349656 1.084250304 0.97051055 1.10647047 1.096973652 1.246664197 0.995856548 1.056742374 1.217032655 1 17.44761233 -5.77544943 24.71418118 1.106477376 1.007858191 0.24204794 0.0833097 290.3866637 512251.1718 0.022998314 0.034305279 1.68E-06 5.77544943 -0.098619186 YTVQDESHSEWVSCVR ddPTM_A459_MK2206_30min_R1 1 YTVQDESHSEWVSCVR 16 0 P63244;J3KPE3;H0Y8W2;H0YAM7;H0YAF8;D6R9L0;D6R9Z1;D6RFZ9;D6RHH4;D6RFX4;D6RBD0 P63244 GNB2L1 "Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed" 0 146.78 0.00047292 9139900 1488.5 1519.9 1740.6 1207.7 1718 1511.1 1811.6 1990.4 1399.1 1356.7 FALSE TRUE 1361.895259 1420.954234 1622.452922 1300.717263 1649.568422 1596.657176 1690.751469 1972.998143 1544.541452 1524.778239 0.893175954 0.931908784 1.064058288 0.853053402 1.08184153 1.047140585 1.108850734 1.293957438 1.012961369 1 10.57438372 -6.577770278 1.852844398 1.119879101 0.9444524 0.36190943 0.09480527 0.348254778 2.434007897 0.035767909 0.037387471 2.64E-07 6.577770278 -0.175426701 YTVQDESHSEWVSCVR ddPTM_A459_MK2206_30min_R2 2 YTVQDESHSEWVSCVR 16 0 P63244;J3KPE3;H0Y8W2;H0YAM7;H0YAF8;D6R9L0;D6R9Z1;D6RFZ9;D6RHH4;D6RFX4;D6RBD0 P63244 GNB2L1 "Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed" 0 ; 120.54 0.0022422 9405600 19565.6 27693 28372 30236 30467 32569 32837 26793 34809 28115 FALSE TRUE 21063.55738 26317.80589 29317.90832 27765.62208 29270.7125 33808.43612 28525.46246 30294.93709 37836.6239 27197.60985 0.774463546 0.967651423 1.077959 1.020884638 1.076223707 1.243066442 1.048822401 1.113882332 1.391174596 1 14.73119225 -3.907203175 0.57177488 1.157443455 6.79E-16 0.52982563 0.106379797 7.576473052 0.889970447 0.052111607 7.251090359 0.000123822 3.907203175 -1.157443455 YVASVLGLTPS(ph)PR ddPTM_A459_MK2206_30min_R1 2 YVASVLGLTPSPR 13 0 Q99666;O14715;F8W705;Q99666-2;C9J1W9;C9JF75 Q99666 RGPD5;RGPD8;RGPD6 RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 YVASVLGLTPS(1)PR;YVASVLGLT(0.122)PS(0.878)PR 167.73 0.00029841 46830000 4840 4541 4269.9 4426.8 5052.3 4845 5248.8 3983.4 4352.1 3582.1 TRUE FALSE 4428.332584 4245.380075 3980.071085 4767.752903 4851.056193 5119.319713 4898.662129 3948.573554 4804.516369 4025.877591 1.099967022 1.054522891 0.988621982 1.184276669 1.204968627 1.27160342 1.21679361 0.980798215 1.193408458 1 11.97508759 -5.772787809 24.98475551 1.159571296 1.048385852 0.204942769 0.091287814 315.2867121 694136.7038 0.026466819 0.039649347 1.69E-06 5.772787809 -0.111185444 YVASVLGLTPS(ph)PR ddPTM_A459_MK2206_30min_R2 2 YVASVLGLTPSPR 13 0 Q99666;O14715;F8W705;Q99666-2;C9J1W9;C9JF75 Q99666 RGPD5;RGPD8;RGPD6 RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 YVASVLGLTPS(1)PR;YVASVLGLTPS(1)PR 183.28 0.00010967 22514000 92758 99643 98397 110433 117503 116711 111067 87074 103267 106943 TRUE FALSE 99859.6238 94694.87351 101677.5069 101410.2706 112889.2418 121152.5189 96483.76948 98454.87077 112248.977 103453.4587 0.965261337 0.915337918 0.982833326 0.980250172 1.091208001 1.171082344 0.932629713 0.951682738 1.085019084 1 16.65862235 -5.890561585 2.640277718 1.036936052 0.947411967 0.239316216 0.067660383 0.432091233 6.099628308 0.021952019 0.035831002 1.29E-06 5.890561585 -0.089524085 YVASYLLAALGGNS(ph)SPSAK ddPTM_A459_MK2206_30min_R1 2 YVASYLLAALGGNSSPSAK 19 0 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 1 YVAS(0.033)YLLAALGGNS(0.745)S(0.221)PSAK;YVASYLLAALGGNS(0.998)S(0.002)PSAK 314.17 3.96E-117 92967000 6935 7965.7 8069.8 6211.9 6881.4 7111.9 7754.4 7071.3 6246.1 6235 TRUE FALSE 6345.141833 7447.131482 7522.04446 6690.341614 6607.299266 7514.569632 7237.118125 7009.47637 6895.404447 7007.438872 0.905486576 1.06274655 1.073437043 0.95474848 0.942897881 1.072370344 1.03277649 1.000290762 0.984012072 1 12.77467154 -6.759268054 24.9992608 1.018838507 0.994937883 0.066517315 0.052968612 235.1576469 2707461.092 0.018862208 0.018012792 1.74E-07 6.759268054 -0.023900624 YVASYLLAALGGNS(ph)SPSAK ddPTM_A459_MK2206_30min_R2 1 YVASYLLAALGGNSSPSAK 19 0 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 1 Y(0.001)VASY(0.008)LLAALGGNS(0.446)S(0.446)PS(0.098)AK 78.903 0.0072331 1117300 5287.3 3351.7 4475.6 4750 4346.5 3896.7 5402.2 3688.6 4528.7 5830.2 TRUE FALSE 5692.099753 3185.259452 4624.81427 4361.909806 4175.834571 4044.991649 4692.884651 4170.712685 4922.59814 5639.961051 1.009244515 0.564766214 0.820008193 0.773393604 0.740401313 0.717202054 0.832077493 0.739493171 0.872807116 1 12.46146948 -8.546060286 3.011473486 0.999749448 0.768048069 0.308172427 0.105257566 0.276719711 6.452335073 0.092490374 0.024658363 2.84E-09 8.546060286 -0.231701379 YVDEENS(ph)DGETSNHR ddPTM_A459_MK2206_30min_R1 5 YVDEENSDGETSNHR 15 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1;H0YH26 A0A494C108 KRI1 Protein KRI1 homolog 1 YVDEENS(0.994)DGET(0.003)S(0.002)NHR;YVDEENS(1)DGETSNHR;YVDEENS(1)DGETSNHR;YVDEENS(1)DGETSNHR;YVDEENS(0.996)DGET(0.003)S(0.001)NHR 260.08 2.28E-36 25325400 4490.31 6904.51 5108.73 5449.48 4651.64 3615.62 4853.7 4844.16 4742.13 5302.15 TRUE FALSE 4108.385555 6455.025144 4761.963641 5869.199894 4466.355329 3820.33328 4529.918529 4801.80802 5235.091383 5959.020371 0.689439757 1.083235959 0.799118537 0.984926973 0.749511673 0.641100893 0.760178393 0.805804934 0.878515437 1 12.54085946 -4.487513299 17.15203109 0.841779867 0.073719417 0.12382734 0.127958473 3905249.964 54080936.21 0.032630914 92254339.61 3.25E-05 4.487513299 -0.76806045 YVDEENS(ph)DGETSNHR ddPTM_A459_MK2206_30min_R2 4 YVDEENSDGETSNHR 15 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1;H0YH26 A0A494C108 KRI1 Protein KRI1 homolog 1 YVDEENS(1)DGETSNHR;YVDEENS(0.99)DGET(0.003)S(0.006)NHR;YVDEENS(1)DGETSNHR;YVDEENS(1)DGETSNHR 167.97 4.58E-05 33859500 42616.3 78673 60764 96994 89505 105035 81855 62581 87237 63741 TRUE FALSE 45879.03669 74766.21322 62789.84143 89069.27993 85990.58397 109032.1805 71107.34017 70760.55157 94824.71657 61661.13639 0.744051105 1.212533819 1.018304967 1.444496244 1.394566967 1.768247991 1.153195422 1.147571318 1.53783602 1 15.91207386 -4.382470509 0.964599453 1.353773263 1.50E-12 0.365085611 0.225790632 4.244761261 1.866020399 0.074668067 7.191111259 4.15E-05 4.382470509 -1.353773263 YVEVS(ph)PATER ddPTM_A459_MK2206_30min_R1 1 YVEVSPATER 10 0 Q9NTZ6 Q9NTZ6 RBM12 RNA-binding protein 12 1 YVEVS(0.829)PAT(0.171)ER 98.156 0.019863 3027400 2343 2022 2185.9 1940.3 2387.7 2144.2 2529.9 1805.4 1828.4 1946.2 TRUE FALSE 2143.715546 1890.367432 2037.527198 2089.742242 2292.592853 2265.602751 2361.134987 1789.615578 2018.468723 2187.309949 0.980069399 0.864243055 0.931521936 0.955393744 1.048133509 1.035794105 1.079469779 0.818181063 0.922808733 1 11.09494195 -4.432010797 21.99514864 0.961160136 2.865277576 0.004903529 0.078012014 5736.6096 1395930.223 0.020327069 2897.061372 3.70E-05 4.432010797 1.90411744 YVGFGNT(ph)PPPQK ddPTM_A459_MK2206_30min_R1 1 YVGFGNTPPPQK 12 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHT6;E5RHC5;F8W1U7;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 YVGFGNT(1)PPPQK 117.92 0.010873 13130000 6826.1 6377.2 5995.8 4909 4840.7 4950.2 5831.3 5220.8 6266.5 6541.2 TRUE FALSE 6245.50435 5962.043121 5588.821801 5287.092031 4647.884669 5230.476046 5442.304617 5175.155096 6917.9251 7351.57324 0.849546641 0.81098874 0.760221196 0.719178312 0.632229935 0.711477105 0.740291151 0.703952056 0.941012879 1 12.8438373 -8.361003063 4.189586177 0.994644569 0.738641401 0.725005031 0.056874864 0.126856202 3.637290795 0.060589775 0.016032002 4.36E-09 8.361003063 -0.256003168 YVGFGNT(ph)PPPQK ddPTM_A459_MK2206_30min_R2 2 YVGFGNTPPPQK 12 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHT6;E5RHC5;F8W1U7;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 Y(0.005)VGFGNT(0.995)PPPQK;YVGFGNT(1)PPPQK 114.87 0.012619 17350300 164190 146595 111772 136007 106374 107977 142666 121191 91142 152445 TRUE FALSE 176760.5126 139315.3055 115498.4227 124894.793 102197.2223 112086.1404 123933.7828 137031.0798 99069.36641 147470.7321 1.198614193 0.944697998 0.78319556 0.846912409 0.693000033 0.760056852 0.840395793 0.929208649 0.671790022 1 17.17006913 -4.812137995 2.225654753 0.808405758 1.284697612 0.603197807 0.094596987 0.373377654 2.302128324 0.024044023 0.348452916 1.54E-05 4.812137995 0.476291854 YVLGQLVGLNS(ph)PNSILK ddPTM_A459_MK2206_30min_R1 2 YVLGQLVGLNSPNSILK 17 0 P33981-2;P33981 P33981-2 TTK Dual specificity protein kinase TTK 1 YVLGQLVGLNS(0.989)PNS(0.011)ILK;YVLGQLVGLNS(0.998)PNS(0.002)ILK 125.61 0.0012334 25767000 5536.8 5873.1 5328.7 4121.1 4398.3 3834 5643.7 5513.7 5292.9 6115.7 TRUE FALSE 5065.866085 5490.760123 4967.002691 4438.507836 4223.106397 4051.077767 5267.219071 5465.494302 5843.115896 6873.359087 0.737029162 0.798846685 0.722645598 0.645755268 0.614416669 0.589388349 0.766323861 0.795170779 0.85011067 1 12.74679962 -8.339765775 1.162593421 0.992078794 0.689861897 0.712662127 0.061851258 0.281575161 0.79490806 0.067378836 0.02177915 4.57E-09 8.339765775 -0.302216898 YVS(ph)GSSPDLVTR ddPTM_A459_MK2206_30min_R1 1 YVSGSSPDLVTR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 YVS(0.634)GS(0.349)S(0.016)PDLVTR 179.59 0.00010389 20248000 1700 1976.4 2020.7 1722.5 1670 1665.1 1931.9 1485.2 1839.2 2008.5 TRUE FALSE 1555.406073 1847.736001 1883.540514 1855.167248 1603.480364 1759.376523 1803.026476 1472.215053 2030.391422 2257.328143 0.689047393 0.818550022 0.834411479 0.821842076 0.710344381 0.779406631 0.79874363 0.652193638 0.899466667 1 11.14040044 -8.507578116 7.359004056 0.999972383 0.769417377 0.63978712 0.05834957 0.08718529 27.85621192 0.056018795 0.014487852 3.11E-09 8.507578116 -0.230555006 YVSGS(ph)SPDLVTR ddPTM_A459_MK2206_30min_R1 2 YVSGSSPDLVTR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 YVS(0.004)GS(0.596)S(0.4)PDLVTR;YVS(0.017)GS(0.622)S(0.361)PDLVTR 184.34 0.00010441 54929000 5365.5 5188.7 4544.1 3842.2 4877.5 4535.9 5120.4 4355.5 4969.6 4466.3 TRUE FALSE 4909.13605 4850.914687 4235.659153 4138.12691 4683.218847 4792.718738 4778.827459 4317.420323 5486.207704 5019.618963 0.977989781 0.966391019 0.843820853 0.824390644 0.932982938 0.954797321 0.952029924 0.860109175 1.09295302 1 12.29336214 -8.263311495 24.99994181 1.046476516 0.913731588 0.479171829 0.055218403 153.9551722 2055808.787 0.047738252 0.01477371 5.45E-09 8.263311495 -0.132744928 YVSGS(ph)SPDLVTR ddPTM_A459_MK2206_30min_R2 6 YVSGSSPDLVTR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 YVS(0.003)GS(0.498)S(0.498)PDLVTR;YVS(0.001)GS(0.654)S(0.346)PDLVTR;YVS(0.023)GS(0.489)S(0.489)PDLVTR;YVS(0.137)GS(0.829)S(0.033)PDLVTR;YVS(0.002)GS(0.614)S(0.384)PDLVTR;YVS(0.004)GS(0.963)S(0.034)PDLVTR 219.89 3.45E-08 181834000 291614 410937 332468 456605 439815 470128 445352 337953 389938 342048 TRUE FALSE 313940.1921 390530.4661 343552.3172 419298.9109 422545.6532 488019.0505 386876.7474 382124.6175 423854.1024 330887.0018 0.948783695 1.180253271 1.03827686 1.267196682 1.277008921 1.474881297 1.169211076 1.154849285 1.28096329 1 18.33597909 -5.763490296 24.99999979 1.247845108 1.068219453 0.285313224 0.125634009 66.59287703 811762.3712 0.034634865 0.054380231 1.72E-06 5.763490296 -0.179625655 YVSGSS(ph)PDLVTR ddPTM_A459_MK2206_30min_R1 2 YVSGSSPDLVTR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 YVS(0.004)GS(0.315)S(0.681)PDLVTR;YVSGS(0.131)S(0.869)PDLVTR 206.74 1.00E-05 64690000 6221.3 5994.7 5813.1 4655.9 5569.5 5218 6532.1 4782.3 6059.8 6190.5 TRUE FALSE 5692.145766 5604.44394 5418.522968 5014.498225 5347.655021 5513.438651 6096.355527 4740.488855 6689.737895 6957.425876 0.81813962 0.805534121 0.778811455 0.720740445 0.768625511 0.792453811 0.876237223 0.681356717 0.961524853 1 12.76433792 -8.393779294 5.870437043 0.997338411 0.782651543 0.720173414 0.050176388 0.114428137 4.660530881 0.047342452 0.012287135 4.04E-09 8.393779294 -0.214686867 YVSQNCVT(ph)SPMNIDR ddPTM_A459_MK2206_30min_R1 1 YVSQNCVTSPMNIDR 15 0 A0A0C4DGF8;A0A1B0GV09;Q9H9B1-3;Q9H9B1;A0A1B0GWF6 A0A0C4DGF8 EHMT1 Histone-lysine N-methyltransferase EHMT1 1 YVSQNCVT(0.674)S(0.326)PMNIDR 131.86 0.0015763 3377700 572.58 646.89 564.11 689.96 592.28 496.01 667.64 556.55 412.51 460.89 TRUE FALSE 523.8790643 604.7773434 525.8197849 743.1008387 568.6882334 524.0936576 623.1029538 551.684142 455.3918907 517.9885327 1.011371934 1.167549676 1.015118582 1.434589362 1.097878037 1.011786216 1.202928085 1.065050879 0.879154386 1 9.01677635 -8.052357519 5.046837519 0.944354451 1.136713288 0.284880849 0.122146903 0.271164527 14.97228569 0.083819749 0.031413815 8.86E-09 8.052357519 0.192358836 YVSQNCVTS(ph)PMNIDR ddPTM_A459_MK2206_30min_R2 2 YVSQNCVTSPMNIDR 15 0 A0A0C4DGF8;A0A1B0GV09;Q9H9B1-3;Q9H9B1;A0A1B0GWF6 A0A0C4DGF8 EHMT1 Histone-lysine N-methyltransferase EHMT1 1 YVSQNCVT(0.028)S(0.972)PMNIDR;YVSQNCVT(0.024)S(0.976)PMNIDR 254.72 1.34E-28 14548300 33499 40213 30248 35839 44958 42062 36501 29302 31531 37369 TRUE FALSE 36063.7092 38216.0809 31256.45322 32910.83906 43192.72302 43662.69888 31708.37485 33131.87201 34273.50939 36149.65259 0.997622567 1.057163158 0.864640487 0.910405404 1.19483093 1.20783177 0.877141897 0.91651979 0.948100657 1 15.14169416 YVYVT(ph)TMKVNEMDGLIAY(ph)SK ddPTM_A459_MK2206_30min_R1 1 YVYVTTMKVNEMDGLIAYSK 20 1 Q8IWZ5 Q8IWZ5 TRIM42 Tripartite motif-containing protein 42 2 Y(0.06)VY(0.284)VT(0.328)T(0.328)MKVNEMDGLIAY(0.765)S(0.236)K 49.537 0.023281 8187200 2881.1 2641.7 2823.9 2704.1 2229.9 1761.4 2483.8 2439.6 2259.3 2078.6 TRUE FALSE 2636.047316 2469.72485 2632.221536 2912.370251 2141.078361 1861.128946 2318.110234 2418.270834 2494.16232 2336.112661 1.128390493 1.05719424 1.126752823 1.246673716 0.916513316 0.796677736 0.992293853 1.035168755 1.067654982 1 11.18989414 -6.276069714 24.99290753 0.962453309 1.13292721 0.512380675 0.081841086 733.6018744 1253204.551 0.028060461 0.031953275 5.30E-07 6.276069714 0.170473901 YWEEETVPTTAGAS(ph)PGPPR ddPTM_A459_MK2206_30min_R1 1 YWEEETVPTTAGASPGPPR 19 0 O15213 O15213 WDR46 WD repeat-containing protein 46 1 YWEEETVPT(0.004)T(0.004)AGAS(0.992)PGPPR 163 8.30E-07 3513500 707.29 553.76 659.61 604.08 720.83 586.98 754.39 623.07 603.57 873.88 TRUE FALSE 647.1312714 517.7101233 614.837511 650.6063463 692.1178147 620.2143003 704.0660196 617.6225647 666.3132614 982.1428519 0.658897298 0.527123038 0.626016378 0.662435556 0.704701779 0.631490927 0.716867224 0.628852069 0.678428052 1 9.939789068 -14.52287874 0.234016476 2.942114827 0.609830302 0.840147554 0.046670532 63.11012584 0.629508858 58.14926148 0.080248983 3.00E-15 14.52287874 -2.332284525 YWEEETVPTTAGAS(ph)PGPPR ddPTM_A459_MK2206_30min_R2 1 YWEEETVPTTAGASPGPPR 19 0 O15213 O15213 WDR46 WD repeat-containing protein 46 1 YWEEETVPTTAGAS(0.999)PGPPR 142.58 4.74E-05 0 7458.4 5764.4 5992.1 7114.4 8177.2 5457.1 8690 7281 5058.9 7369.6 TRUE FALSE 8029.420839 5478.148278 6191.873623 6533.130762 7856.122041 5664.773764 7548.992561 8232.651699 5498.913978 7129.130556 1.126283321 0.768417444 0.868531383 0.916399372 1.101974775 0.794595319 1.058893858 1.154790424 0.771330239 1 12.79951043 -6.029472463 24.7379633 0.985063986 0.903587013 0.037231051 0.141139262 1772.91677 1488110.613 0.040433308 0.052292717 9.34E-07 6.029472463 -0.081476973 YWGPAS(ph)PTHK ddPTM_A459_MK2206_30min_R2 4 YWGPASPTHK 10 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;Q9H6S3-2 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 YWGPAS(0.988)PT(0.012)HK;YWGPAS(0.975)PT(0.025)HK;YWGPAS(0.978)PT(0.022)HK;YWGPAS(0.684)PT(0.316)HK 92.781 0.017293 681302000 539058 535839 463725 468950 395582 379226 509142 358300 297167 428756 TRUE FALSE 580328.6949 509230.0144 479185.3601 430635.2849 380049.463 393657.7112 442291.0438 405131.0402 323014.0485 414765.7268 1.399172249 1.227753359 1.15531571 1.038261498 0.916299102 0.949108583 1.066363528 0.976770774 0.778786741 1 18.66193716 -5.005805091 0.77389858 0.94301888 1.570411651 0.810876138 0.072049421 0.890391504 0.506169074 0.030524073 0.456720499 9.87E-06 5.005805091 0.62739277 YWLCAATGPS(ph)IK ddPTM_A459_MK2206_30min_R2 1 YWLCAATGPSIK 12 0 P63244;J3KPE3;H0Y8W2;H0YAM7;H0YAF8;D6REE5;D6RAC2;H0Y8R5;D6RF23;H0Y9P0 P63244 GNB2L1 "Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed" 1 YWLCAAT(0.491)GPS(0.509)IK 76.326 0.047968 2765200 5099 8564.4 6685 8000.2 9870.3 10291 7591.9 7959.4 8330.8 5424.8 TRUE FALSE 5489.38336 8139.10435 6907.874563 7346.558069 9482.742428 10682.63122 6595.07441 8999.720909 9055.397925 5247.78922 1.046037318 1.550958701 1.316339943 1.399933907 1.806997581 2.03564411 1.256733861 1.714954723 1.725564337 1 12.35749406 -4.756342775 5.521533106 1.562469174 1.01921087 0.199656038 0.288185854 0.253766478 24.38713195 0.071338161 0.526409288 1.75E-05 4.756342775 -0.543258305 YWPQEAGEYAVHVLCNSEDIR ddPTM_A459_MK2206_30min_R1 2 YWPQEAGEYAVHVLCNSEDIR 21 0 P21333-2;P21333;Q60FE5;A0A087WWY3 P21333-2 FLNA Filamin-A 0 ; 143.72 1.14E-05 17586200 1441.69 1440.22 1655.55 1464.39 1945.88 1441.33 1726.88 1565.12 1260.42 1466.32 FALSE TRUE 1319.066695 1346.461416 1543.175879 1577.177572 1868.371479 1522.936859 1611.682986 1551.436321 1391.445169 1647.978792 0.800414848 0.817038073 0.936405181 0.957037542 1.133735148 0.924124064 0.977975563 0.94141765 0.844334391 1 10.68648196 -5.306537157 2.672522288 0.970678191 0.799549106 0.460009676 0.068317393 0.258010837 3.562033959 0.019472009 0.057181992 4.94E-06 5.306537157 -0.171129085 YWQQVIDMNDYQR ddPTM_A459_MK2206_30min_R1 2 YWQQVIDMNDYQR 13 0 O60701;O60701-2;O60701-3 O60701 UGDH UDP-glucose 6-dehydrogenase 0 ; 191.4 0.01605 71083000 3814.7 3989 4099.1 3475.5 3887.7 4137 4145.3 3651.5 3473.9 3084.7 FALSE TRUE 3490.239733 3729.315375 3820.864513 3743.183612 3732.844677 4371.233365 3868.774601 3619.57532 3835.024336 3466.855924 1.006744961 1.075705324 1.102112287 1.079705559 1.076723336 1.260863866 1.115931751 1.044051267 1.106196629 1 11.75941217 -4.065350643 1.094922947 1.106705335 0.687334902 0.148215681 0.063810569 12.83351861 4.109759804 0.020200951 9.107295618 8.60E-05 4.065350643 -0.419370434 YWQQVIDMNDYQR ddPTM_A459_MK2206_30min_R2 2 YWQQVIDMNDYQR 13 0 O60701;O60701-2;O60701-3 O60701 UGDH UDP-glucose 6-dehydrogenase 0 ; 205.12 0.00035541 11343400 29557 29963 29882 32848 30521 33137 30741 26304 27100 32674 FALSE TRUE 31819.90665 28475.08099 30878.25097 30164.21332 29322.59218 34398.05176 26704.66977 29742.02312 29457.10901 31607.85006 1.006708985 0.90088636 0.976917155 0.954326639 0.927699674 1.088275593 0.844874603 0.940969508 0.931955478 1 14.94799529 -10.54470701 4.628145727 1.000001381 0.95152328 0.051261624 0.061154925 8.70E-07 1.84E-07 0.056664009 0.013742633 2.85E-11 10.54470701 -0.048478101 YWSQQIEESTTVVTTQSAEVGAAETTLTELRR ddPTM_A459_MK2206_30min_R1 4 YWSQQIEESTTVVTTQSAEVGAAETTLTELRR 32 1 P05783;F8VZY9 P05783 KRT18 "Keratin, type I cytoskeletal 18" 0 ;;; 219.58 3.52E-57 27638700 2522.05 2318.105 2574.18 2214.36 2701.73 2654.13 3118.26 2400.52 2591.35 2033.96 FALSE TRUE 2307.536404 2167.195943 2399.451834 2384.910391 2594.114373 2804.404547 2910.246565 2379.532507 2860.730106 2285.94232 1.009446469 0.948053642 1.049655458 1.043294212 1.134811824 1.226804597 1.273105861 1.040941622 1.251444571 1 11.15857329 -6.1110819 1.834904678 1.168952849 0.992712526 0.410390183 0.084348581 0.318835993 2.129126432 0.027600366 0.040951844 7.74E-07 6.1110819 -0.176240323 YYGGGS(ph)EGGR ddPTM_A459_MK2206_30min_R1 2 YYGGGSEGGR 10 0 P14866 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 YYGGGS(1)EGGR;YYGGGS(1)EGGR 107.45 0.0085616 0 3417.5 3669.5 3643 2999.5 3294.2 3426 3914.8 3195.3 2825.4 3179.8 TRUE FALSE 3126.823679 3430.614883 3395.72331 3230.52201 3162.985038 3619.977159 3653.650835 3167.363829 3119.110441 3573.73763 0.874944946 0.959951524 0.950188195 0.903961718 0.885063585 1.012938703 1.02236124 0.886288854 0.872786635 1 11.80321801 -6.735312218 24.99995693 0.955736107 0.91869065 0.147472098 0.052277958 585.6546266 560386.314 0.018652288 0.01864614 1.84E-07 6.735312218 -0.037045456 YYGGGS(ph)EGGR ddPTM_A459_MK2206_30min_R2 1 YYGGGSEGGR 10 0 P14866 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 YYGGGS(1)EGGR 108.31 0.010756 10398000 20818 14971 16746 18626 18711 14813 20591 12866 16651 17406 TRUE FALSE 22411.84209 14227.56191 17304.30328 17104.19622 17976.31212 15376.71909 17887.37697 14547.63038 18099.27388 16838.04365 1.331024112 0.844965259 1.027690844 1.015806621 1.067600994 0.913212925 1.062319195 0.863973908 1.074903609 1 14.03943691 -4.746301078 24.99758556 0.986313275 1.331025035 0.629152253 0.079556279 515.7895909 851666.3815 0.018381491 0.425050791 1.79E-05 4.746301078 0.34471176 YYGGGS(ph)EGGRAPK ddPTM_A459_MK2206_30min_R1 1 YYGGGSEGGRAPK 13 1 P14866 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 YYGGGS(1)EGGRAPK 120.6 0.014255 3391400 1831.5 1689.7 1842.2 1688.4 2008.7 1549.3 1200.3 2324.1 969.88 710.34 TRUE FALSE 1675.721307 1579.700223 1717.156597 1818.440861 1928.689226 1637.020027 1120.230177 2303.780639 1070.702497 798.342282 2.099001074 1.97872549 2.150902734 2.277770953 2.415867566 2.050524022 1.403195349 2.885705406 1.341157196 1 9.640863611 -8.480922194 8.753406019 1.000109215 2.134880795 0.567036317 0.350944746 0.213891835 41.92425149 0.324398867 0.083818204 3.30E-09 8.480922194 1.13477158 YYHSPTNTVHMYPPEMAPSSAPPS(ph)TPPTHK ddPTM_A459_MK2206_30min_R2 1 YYHSPTNTVHMYPPEMAPSSAPPSTPPTHK 30 0 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 YYHSPTNTVHMYPPEMAPS(0.099)S(0.099)APPS(0.639)T(0.121)PPT(0.041)HK 50.499 0.0074035 6133000 9486.3 15795 10697 17638 19296 19327 18814 10316 15957 12796 TRUE FALSE 10212.57842 15010.64327 11053.63264 16196.91898 18538.34209 20062.50253 16343.6992 11664.33662 17344.91102 12378.46757 0.825027683 1.212641483 0.892972622 1.308475293 1.497628199 1.620758177 1.320332998 0.942308614 1.40121634 1 13.5955451 -5.775428157 24.13334985 1.318882899 1.000456734 0.31604161 0.214665521 186.0161728 320913.7857 0.062763785 0.093674859 1.68E-06 5.775428157 -0.318426165 YYLHDDR ddPTM_A459_MK2206_30min_R1 2 YYLHDDR 7 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 ; 107.59 0.023364 21221000 8183.9 7946.4 8549.8 6370.4 8752.5 7784.5 8522.2 7873.2 6922.1 6563.5 FALSE TRUE 7487.81633 7429.087916 7969.463397 6861.049312 8403.869391 8225.251663 7953.699588 7804.365442 7641.677066 7376.635932 1.015071965 1.007110556 1.080365558 0.930105454 1.139255003 1.115041021 1.078228567 1.05798436 1.035929811 1 12.84874732 -5.246830088 24.07694787 1.058262276 1.011091246 0.086148025 0.055695627 1193.479529 1966907.714 0.014461652 0.037859265 5.66E-06 5.246830088 -0.04717103 YYMSDDISRDS(ph)DGMDEQCR ddPTM_A459_MK2206_30min_R2 2 YYMSDDISRDSDGMDEQCR 19 1 P46100-4;P46100;P46100-5;P46100-3;P46100-6;A0A096LNL9;A0A096LNW1;A0A096LNL6;A0A096LNN3 P46100-4 ATRX Transcriptional regulator ATRX 1 YYMS(0.001)DDIS(0.006)RDS(0.993)DGMDEQCR;YYMS(0.001)DDIS(0.061)RDS(0.939)DGMDEQCR 78.166 0.0042182 20645000 23824 28216 28033.3 29686.4 32042.4 34330 30953.7 23694.8 27647.8 28668.2 TRUE FALSE 25647.98376 26814.83447 28967.91623 27260.92616 30784.25438 35636.45221 26889.44201 26791.79172 30052.55567 27732.75898 0.92482626 0.966901075 1.044537842 0.982986445 1.110032161 1.284994841 0.969591306 0.966070189 1.083648247 1 14.75930353 -5.171921377 1.252342178 1.06562835 0.90738885 0.205055387 0.089290491 1.375384737 2.944443248 0.030278479 0.235131793 6.73E-06 5.171921377 -0.1582395 YYNSDVHR ddPTM_A459_MK2206_30min_R1 4 YYNSDVHR 8 0 K7EL89;P19623 K7EL89 SRM Spermidine synthase 0 ;;; 178.94 0.00023686 13834500 9874.6 7832 9049.3 7404.9 10743.5 9344.1 10382.4 9717.1 7111.7 6979.5 FALSE TRUE 9034.713416 7322.135376 8435.058729 7975.226681 10315.56365 9873.154867 9689.80904 9632.144419 7850.986664 7844.173153 1.151773838 0.933448973 1.075327962 1.016707118 1.315060676 1.258661005 1.2352875 1.227936231 1.000868608 1 12.93740567 -6.233659657 24.89955064 1.191766353 1.038610736 0.235300868 0.110357527 864.8016366 775139.6546 0.031928248 0.041211193 5.84E-07 6.233659657 -0.153155617 YYNSDVHR ddPTM_A459_MK2206_30min_R2 3 YYNSDVHR 8 0 K7EL89;P19623 K7EL89 SRM Spermidine synthase 0 ;; 176.6 0.00023686 8083200 32105.5 47073 38488.8 56222 53888 55730 55907 46946 46884 42230.9 FALSE TRUE 34563.52176 44735.42327 39771.99738 51628.48275 51772.08635 57850.8442 48566.34374 53082.00339 50961.88557 40852.90919 0.846047991 1.095036416 0.973541375 1.263765146 1.267280284 1.416076489 1.188809921 1.299344513 1.24744814 1 15.3181512 -5.762163951 24.99395345 1.259153554 0.983891324 0.533756083 0.11403262 13.46189006 464398.0871 0.029812821 0.047359252 1.73E-06 5.762163951 -0.27526223 YYPTEDVPR ddPTM_A459_MK2206_30min_R2 1 YYPTEDVPR 9 0 Q02878;F8VR69;F8VZ45;U3KQR5 Q02878 RPL6 60S ribosomal protein L6 0 134.81 0.038688 13027000 54358 63731 66550 57129 45046 58349 77223 43766 38633 69557 FALSE TRUE 58519.69027 60566.21121 68768.74378 52461.37795 43277.2677 60569.51208 67083.52734 49486.36647 41993.22851 67287.36079 0.869698107 0.900112748 1.022015769 0.779661698 0.64317083 0.900161804 0.996970702 0.735448172 0.624087912 1 16.03804791 -5.783756218 24.90347186 0.804760597 0.927559312 0.154689855 0.127033801 415.9912041 464205.0501 0.037287397 0.055353413 1.65E-06 5.783756218 0.122798715 YYS(ph)DSDDELTVEQR ddPTM_A459_MK2206_30min_R2 1 YYSDSDDELTVEQR 14 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 YYS(0.689)DS(0.311)DDELTVEQR 207.64 6.62E-06 6256600 15303 14323 18271 14758 13741 12331 16482 14335 11891 13886 TRUE FALSE 16474.60945 13611.74065 18880.14602 13552.22419 13201.4593 12800.26485 14317.8936 16208.63372 12925.25769 13432.90096 1.226437201 1.013313557 1.405515166 1.008882909 0.982770538 0.952903985 1.065882466 1.206636881 0.962208962 1 13.71348328 YYS(ph)IDDNQNK ddPTM_A459_MK2206_30min_R2 4 YYSIDDNQNK 10 0 Q8NI08-2;Q8NI08;Q8NI08-4;Q8NI08-3;Q5TF97;Q5TF96 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 Y(0.003)YS(0.997)IDDNQNK;Y(0.007)YS(0.993)IDDNQNK;Y(0.001)YS(0.999)IDDNQNK;YYS(1)IDDNQNK 162.49 0.00040797 53455100 218937 215910 179375 196827 178473 157062 250859 181538 196661 244334 TRUE FALSE 235698.9851 205188.2234 185355.273 180745.6045 171465.2533 163039.1045 217920.912 205265.6399 213766.2183 236361.4016 0.997197442 0.86811223 0.7842028 0.764700172 0.725436777 0.689787348 0.921981806 0.868439764 0.90440409 1 17.85063493 -8.258553277 1.11308638 0.989478579 0.808490996 0.304859595 0.085721142 0.618512761 1.547779151 0.087493008 0.029101696 5.51E-09 8.258553277 -0.180987583 YYTSAS(ph)GDEMVSLK ddPTM_A459_MK2206_30min_R1 1 YYTSASGDEMVSLK 14 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 YYTSAS(0.997)GDEMVS(0.002)LK 150.9 0.00041203 3550400 1373.6 992.2 1382.8 755.53 3159.5 2755.3 2463.9 1817.9 1237.9 1080.1 TRUE FALSE 1256.768107 927.6075997 1288.939389 813.7210515 3033.650425 2911.302705 2299.537727 1802.006292 1366.584135 1213.910942 1.035305032 0.764147984 1.061807208 0.670330107 2.499071652 2.3982836 1.894321607 1.48446334 1.125769681 1 10.24544687 -6.240933178 24.97986213 1.799139952 0.887194669 0.441632149 0.465146002 772.1024064 940545.2853 0.1455629 0.187703792 5.74E-07 6.240933178 -0.911945284 YYTSASGDEMVS(ph)LKDYCTR ddPTM_A459_MK2206_30min_R1 2 YYTSASGDEMVSLKDYCTR 19 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 YYTSASGDEMVS(0.992)LKDYCT(0.008)R;YYTSASGDEMVS(1)LKDYCTR 105.38 0.00047635 35858000 2175.43 2571.19 2411.4 2396.39 2334.8 1875.72 1929.53 2471.7 2295.65 1662.02 TRUE FALSE 1990.398255 2403.805064 2247.720887 2580.960373 2241.799972 1981.921645 1800.814574 2450.090187 2534.291033 1867.923585 1.06556728 1.286886189 1.203325931 1.381726958 1.200156146 1.061029295 0.964072936 1.311665106 1.356742349 1 10.86721972 -6.5272335 24.93404002 1.14541402 1.242788395 0.096987055 0.136990088 315.7804607 1808043.073 0.047212403 0.047387745 2.97E-07 6.5272335 0.097374375 YYVTIIDAPGHR ddPTM_A459_MK2206_30min_R1 2 YYVTIIDAPGHR 12 0 P68104;A0A087WVQ9;Q5VTE0;A0A087WV01;A6PW80;Q5JR01 P68104 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 0 ; 136.53 0.0019662 166696000 12788.8 13273.7 12733.6 12714 13289.5 12845.1 13722.3 11463.5 10173.5 10990.7 FALSE TRUE 11701.0454 12409.57972 11869.27871 13693.23448 12760.15107 13572.37846 12806.9104 11363.27583 11231.07173 12352.31089 0.947275818 1.004636284 0.9608954 1.108556496 1.033017318 1.098772414 1.036802791 0.919931171 0.909228389 1 13.59249335 -7.758085024 24.99884892 0.935934823 1.02983645 0.341117404 0.053184149 91.91886951 685055.7784 0.027320463 0.01493929 1.75E-08 7.758085024 0.093901627 YYVTIIDAPGHR ddPTM_A459_MK2206_30min_R2 1 YYVTIIDAPGHR 12 0 P68104;A0A087WVQ9;Q5VTE0;A0A087WV01;A6PW80;Q5JR01 P68104 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 0 128.08 0.003515 44297000 116290 162280 138740 182610 166080 167400 171320 162210 143310 150030 FALSE TRUE 125193.2518 154221.4112 143365.5224 167690.1789 159558.8647 173770.5243 148825.4782 183411.404 155774.8448 145134.5334 0.862601401 1.062610032 0.987811233 1.155411982 1.099385935 1.197306528 1.025431196 1.263733721 1.073313436 1 17.14703131 -3.806918946 0.772317836 1.125146608 2.63E-17 0.432418667 0.082026222 8.746008595 1.297474513 0.028331185 12.06419271 0.000155984 3.806918946 -1.125146608